id ChimerDB_Type Source webSource Fusion_pair H_gene H_chr H_position H_strand T_gene T_chr T_position T_strand Genomic_breakpoint Genome_Build_Version Cancertype BarcodeID Seed_reads_num Spanning_pairs_num Junction_reads_num Frame Chr_info H_locus H_kinase H_oncogene H_tumor_suppressor H_receptor H_transcription_factor T_locus T_kinase T_oncogene T_tumor_suppressor T_receptor T_transcription_factor ChimerKB ChimerPub Highly_Reliable_Seq 1 ChimerSeq FusionScan TCGA_RNA-Seq WIBG-SLC16A7 WIBG chr12 56297170 - SLC16A7 chr12 60173203 + Exonic hg19 ACC TCGA-OR-A5KT 3 Out-of-Frame Intra-chr 12q13.2 q14.1 Seq+ 2 ChimerSeq FusionScan TCGA_RNA-Seq FNDC3A-RPS29 FNDC3A chr13 49720071 + RPS29 chr14 50052767 - Exonic hg19 ACC TCGA-OR-A5KT 2 In-Frame Inter-chr q14.2 q21.3 3 ChimerSeq FusionScan TCGA_RNA-Seq KCMF1-RAB1A KCMF1 chr2 85198590 + RAB1A chr2 65325200 - Exonic hg19 ACC TCGA-OR-A5K5 4 Out-of-Frame Intra-chr p11.2 Transcription factor p14 Seq+ 4 ChimerSeq FusionScan TCGA_RNA-Seq SIK3-CTNNBIP1 SIK3 chr11 116968858 - CTNNBIP1 chr1 9910834 - Exonic hg19 ACC TCGA-OR-A5K5 4 Out-of-Frame Inter-chr q23.3 p36.22 Tumor suppressor gene Seq+ 5 ChimerSeq FusionScan TCGA_RNA-Seq BRK1-FANCD2 BRK1 chr3 10157503 + FANCD2 chr3 10138009 + Exonic hg19 ACC TCGA-OR-A5K5 2 Out-of-Frame Intra-chr p25.3 p25.3 Oncogene Seq+ 6 ChimerSeq FusionScan TCGA_RNA-Seq TXNDC11-CIB4 TXNDC11 chr16 11829872 - CIB4 chr2 26863435 - Exonic hg19 ACC TCGA-OR-A5K5 2 In-Frame Inter-chr p13.13 p23.3 Seq+ 7 ChimerSeq FusionScan TCGA_RNA-Seq MYO1D-AATF MYO1D chr17 31203795 - AATF chr17 35376303 + Exonic hg19 ACC TCGA-OR-A5K5 2 Out-of-Frame Intra-chr q11.2 8 ChimerSeq FusionScan TCGA_RNA-Seq BRK1-FANCD2 BRK1 chr3 10157503 + FANCD2 chr3 10136883 + Exonic hg19 ACC TCGA-OR-A5K5 2 Out-of-Frame Intra-chr p25.3 p25.3 Oncogene Seq+ 9 ChimerSeq FusionScan TCGA_RNA-Seq TAF6L-PCYT1A TAF6L chr11 62538962 + PCYT1A chr3 195969511 - Exonic hg19 ACC TCGA-OR-A5JM 3 5'UTR-CDS Inter-chr q12.3 q29 Seq+ 10 ChimerSeq FusionScan TCGA_RNA-Seq AHCYL2-REN AHCYL2 chr7 128865280 + REN chr1 204131291 - Exonic hg19 ACC TCGA-OR-A5JM 2 Out-of-Frame Inter-chr q32.1 q32.1 Seq+ 11 ChimerSeq FusionScan TCGA_RNA-Seq GPR98-CLPTM1L GPR98 chr5 90281339 + CLPTM1L chr5 1318568 - Exonic hg19 ACC TCGA-OR-A5JV 4 In-Frame Intra-chr p15.33 Seq+ 12 ChimerSeq FusionScan TCGA_RNA-Seq KIF1B-FAM58A KIF1B chr1 10292492 + FAM58A chrX 152861645 - Exonic hg19 ACC TCGA-OR-A5J7 5 In-Frame Inter-chr p36.22 Tumor suppressor gene q28 Seq+ 13 ChimerSeq FusionScan TCGA_RNA-Seq PEBP1-DENND4B PEBP1 chr12 118577356 + DENND4B chr1 153908664 - Exonic hg19 ACC TCGA-OR-A5J7 4 Out-of-Frame Inter-chr q24.23 Tumor suppressor gene q21.3 Seq+ 14 ChimerSeq FusionScan TCGA_RNA-Seq PRX-BLVRB PRX chr19 40904526 - BLVRB chr19 40953953 - Exonic hg19 ACC TCGA-OR-A5J7 3 Out-of-Frame Intra-chr q13.2 q13.2 Seq+ 15 ChimerSeq FusionScan TCGA_RNA-Seq SCMH1-CA6 SCMH1 chr1 41499654 - CA6 chr1 9009321 + Exonic hg19 ACC TCGA-OR-A5J7 2 In-Frame Intra-chr p34.2 Transcription factor p36.23 Seq+ 16 ChimerSeq FusionScan TCGA_RNA-Seq ASPSCR1-HGS ASPSCR1 chr17 79943483 + HGS chr17 79667496 + Exonic hg19 ACC TCGA-OR-A5J7 2 Out-of-Frame Intra-chr q25.3 q25.3 Seq+ 17 ChimerSeq FusionScan TCGA_RNA-Seq AP2A2-DRD4 AP2A2 chr11 977224 + DRD4 chr11 639432 + Exonic hg19 ACC TCGA-OR-A5J7 2 In-Frame Intra-chr p15.5 p15.5 Seq+ 18 ChimerSeq FusionScan TCGA_RNA-Seq NFE2L1-NPEPPS NFE2L1 chr17 46125824 + NPEPPS chr17 45673718 + Exonic hg19 ACC TCGA-OR-A5J7 2 5'UTR-CDS Intra-chr q21.32 Transcription factor q21.32 Seq+ 19 ChimerSeq FusionScan TCGA_RNA-Seq ECHDC2-GTF2I ECHDC2 chr1 53373539 - GTF2I chr7 74160675 + Exonic hg19 ACC TCGA-OR-A5J6 2 In-Frame Inter-chr p32.3 q11.23 Transcription factor 20 ChimerSeq FusionScan TCGA_RNA-Seq KDM6A-FUNDC1 KDM6A chrX 44833960 + FUNDC1 chrX 44401347 - Exonic hg19 ACC TCGA-OR-A5KV 7 Out-of-Frame Intra-chr p11.3 Oncogene Tumor suppressor gene p11.3 Seq+ 21 ChimerSeq FusionScan TCGA_RNA-Seq KDM6A-FUNDC1 KDM6A chrX 44833960 + FUNDC1 chrX 44386611 - Exonic hg19 ACC TCGA-OR-A5KV 4 In-Frame Intra-chr p11.3 Oncogene Tumor suppressor gene p11.3 Seq+ 22 ChimerSeq FusionScan TCGA_RNA-Seq MYO9B-KXD1 MYO9B chr19 17186684 + KXD1 chr19 18672845 + Exonic hg19 ACC TCGA-OR-A5KX 2 5'UTR-5'UTR Intra-chr p13.11 p13.11 23 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP23-RPL23 ARHGAP23 chr17 36638919 + RPL23 chr17 37009358 - Exonic hg19 ACC TCGA-OR-A5KX 2 Out-of-Frame Intra-chr q12 q12 Seq+ 24 ChimerSeq FusionScan TCGA_RNA-Seq ZNF626-CD97 ZNF626 chr19 20844249 - CD97 chr19 14499261 + Exonic hg19 ACC TCGA-OR-A5KX 2 Out-of-Frame Intra-chr p12 Transcription factor 25 ChimerSeq FusionScan TCGA_RNA-Seq CREB3L2-CPA2 CREB3L2 chr7 137686349 - CPA2 chr7 129921943 + Exonic hg19 ACC TCGA-OR-A5JY 8 In-Frame Intra-chr q33 Transcription factor q32.2 Seq+ 26 ChimerSeq FusionScan TCGA_RNA-Seq CHD4-VWF CHD4 chr12 6680034 - VWF chr12 6145657 - Exonic hg19 ACC TCGA-OR-A5JY 2 In-Frame Intra-chr p13.31 p13.31 Seq+ 27 ChimerSeq FusionScan TCGA_RNA-Seq MGA-NUSAP1 MGA chr15 41991357 + NUSAP1 chr15 41641295 + Exonic hg19 ACC TCGA-OR-A5JY 2 Out-of-Frame Intra-chr q15.1 Transcription factor q15.1 Seq+ 28 ChimerSeq FusionScan TCGA_RNA-Seq UBE2J1-C6orf165 UBE2J1 chr6 90062257 - C6orf165 chr6 88173737 + Exonic hg19 ACC TCGA-OR-A5JY 2 Out-of-Frame Intra-chr q15 Seq+ 29 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-ATG7 TBL1XR1 chr3 176914908 - ATG7 chr3 11596284 + Exonic hg19 ACC TCGA-OR-A5JY 2 5'UTR-CDS Intra-chr q26.32 p25.3 Seq+ 30 ChimerSeq FusionScan TCGA_RNA-Seq RRP7A-PACSIN2 RRP7A chr22 42915719 - PACSIN2 chr22 43275175 - Exonic hg19 ACC TCGA-PK-A5HB 3 Out-of-Frame Intra-chr q13.2 q13.2 Seq+ 31 ChimerSeq FusionScan TCGA_RNA-Seq KCNQ1-DUSP8 KCNQ1 chr11 2799267 + DUSP8 chr11 1587164 - Exonic hg19 ACC TCGA-PA-A5YG 3 5'UTR-5'UTR Intra-chr p15.5 Seq+ 32 ChimerSeq FusionScan TCGA_RNA-Seq MATR3-TTLL5 MATR3 chr5 138629494 + TTLL5 chr14 76368484 + Exonic hg19 ACC TCGA-OR-A5JL 2 5'UTR-CDS Inter-chr q31.2 q24.3 33 ChimerSeq FusionScan TCGA_RNA-Seq CYP21A2-AES CYP21A2 chr6 32006401 + AES chr19 3057740 - Exonic hg19 ACC TCGA-OR-A5JL 2 3'UTR-CDS Inter-chr p13.3 34 ChimerSeq FusionScan TCGA_RNA-Seq SCARB1-NCS1 SCARB1 chr12 125348140 - NCS1 chr9 132963236 + Exonic hg19 ACC TCGA-OR-A5LH 3 Out-of-Frame Inter-chr q24.31 q34.11 35 ChimerSeq FusionScan TCGA_RNA-Seq LDLR-ZGLP1 LDLR chr19 11224438 + ZGLP1 chr19 10415884 - Exonic hg19 ACC TCGA-OR-A5JP 3 In-Frame Intra-chr p13.2 p13.2 Transcription factor Seq+ 36 ChimerSeq FusionScan TCGA_RNA-Seq MYLIP-OR5V1 MYLIP chr6 16130978 + OR5V1 chr6 29324054 - Exonic hg19 ACC TCGA-OR-A5JP 3 CDS-5'UTR Intra-chr p22.3 Seq+ 37 ChimerSeq FusionScan TCGA_RNA-Seq SCAMP4-COX8A SCAMP4 chr19 1918989 + COX8A chr11 63743696 + Exonic hg19 ACC TCGA-OR-A5JP 3 Out-of-Frame Inter-chr p13.3 q13.1 Seq+ 38 ChimerSeq FusionScan TCGA_RNA-Seq MSI2-CA10 MSI2 chr17 55607085 + CA10 chr17 50149753 - Exonic hg19 ACC TCGA-OR-A5JP 2 In-Frame Intra-chr q22 q22 Seq+ 39 ChimerSeq FusionScan TCGA_RNA-Seq CHID1-LSP1 CHID1 chr11 899339 - LSP1 chr11 1901316 + Exonic hg19 ACC TCGA-OR-A5JX 2 In-Frame Intra-chr p15.5 p15.5 40 ChimerSeq FusionScan TCGA_RNA-Seq PLBD2-CIDEC PLBD2 chr12 113796695 + CIDEC chr3 9920195 - Exonic hg19 ACC TCGA-OR-A5L6 4 In-Frame Inter-chr q24.13 p25.3 Seq+ 41 ChimerSeq FusionScan TCGA_RNA-Seq CLK1-NAPRT1 CLK1 chr2 201719338 - NAPRT1 chr8 144660113 - Exonic hg19 ACC TCGA-OR-A5L6 2 Out-of-Frame Inter-chr q33.1 CMGC:CLK Seq+ 42 ChimerSeq FusionScan TCGA_RNA-Seq BIRC6-TTC27 BIRC6 chr2 32582554 + TTC27 chr2 33042523 + Exonic hg19 ACC TCGA-OR-A5JC 4 In-Frame Intra-chr p22.3 p22.3 Seq+ 43 ChimerSeq FusionScan TCGA_RNA-Seq GANAB-C11orf48 GANAB chr11 62414033 - C11orf48 chr11 62432445 - Exonic hg19 ACC TCGA-OR-A5LS 5 Out-of-Frame Intra-chr q12.3 Tumor suppressor gene Seq+ 44 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 ACC TCGA-OR-A5LS 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 45 ChimerSeq FusionScan TCGA_RNA-Seq SLCO1B1-IAPP SLCO1B1 chr12 21377773 + IAPP chr12 21526270 + Exonic hg19 ACC TCGA-OR-A5LE 2 CDS-5'UTR Intra-chr p12.1 p12.1 Seq+ 46 ChimerSeq FusionScan TCGA_RNA-Seq NFIC-C16orf55 NFIC chr19 3359683 + C16orf55 chr16 89735693 + Exonic hg19 ACC TCGA-OR-A5K2 6 Out-of-Frame Inter-chr p13.3 Transcription factor Seq+ 47 ChimerSeq FusionScan TCGA_RNA-Seq NUTF2-TSNAXIP1 NUTF2 chr16 67880888 + TSNAXIP1 chr16 67861151 + Exonic hg19 ACC TCGA-OR-A5K2 5 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 48 ChimerSeq FusionScan TCGA_RNA-Seq NUTF2-TSNAXIP1 NUTF2 chr16 67880888 + TSNAXIP1 chr16 67860865 + Exonic hg19 ACC TCGA-OR-A5K2 3 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 49 ChimerSeq FusionScan TCGA_RNA-Seq NFIC-C16orf55 NFIC chr19 3366664 + C16orf55 chr16 89735693 + Exonic hg19 ACC TCGA-OR-A5K2 2 Out-of-Frame Inter-chr p13.3 Transcription factor Seq+ 50 ChimerSeq FusionScan TCGA_RNA-Seq CDC42SE2-HINT1 CDC42SE2 chr5 130599859 + HINT1 chr5 130498369 - Exonic hg19 ACC TCGA-OR-A5JB 2 5'UTR-CDS Intra-chr q31.1 q23.3 Tumor suppressor gene 51 ChimerSeq FusionScan TCGA_RNA-Seq CDKL3-PPP2CA CDKL3 chr5 133638280 - PPP2CA chr5 133541822 - Exonic hg19 ACC TCGA-PK-A5HA 2 In-Frame Intra-chr q31.1 CMGC:CDKL q31.1 Tumor suppressor gene 52 ChimerSeq FusionScan TCGA_RNA-Seq YPEL3-EXD3 YPEL3 chr16 30106572 - EXD3 chr9 140218595 - Exonic hg19 ACC TCGA-P6-A5OF 5 In-Frame Inter-chr p11.2 Tumor suppressor gene q34.3 Seq+ 53 ChimerSeq FusionScan TCGA_RNA-Seq GNB1-TSC2 GNB1 chr1 1770628 - TSC2 chr16 2129032 + Exonic hg19 ACC TCGA-P6-A5OF 2 5'UTR-CDS Inter-chr p36.33 p13.3 Oncogene Tumor suppressor gene Seq+ 54 ChimerSeq FusionScan TCGA_RNA-Seq PPP1CB-BRE PPP1CB chr2 28975042 + BRE chr2 28521204 + Exonic hg19 ACC TCGA-OR-A5KY 9 In-Frame Intra-chr p23.2 Seq+ 55 ChimerSeq FusionScan TCGA_RNA-Seq CHD3-RAD51C CHD3 chr17 7797253 + RAD51C chr17 56787219 + Exonic hg19 ACC TCGA-OR-A5KY 5 In-Frame Intra-chr p13.1 q22 Tumor suppressor gene Seq+ 56 ChimerSeq FusionScan TCGA_RNA-Seq B4GALT5-ASIP B4GALT5 chr20 48330112 - ASIP chr20 32848170 + Exonic hg19 ACC TCGA-OR-A5KY 5 CDS-5'UTR Intra-chr q13.13 q11.22 Seq+ 57 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R37-BCAM PPP1R37 chr19 45596785 + BCAM chr19 45314481 + Exonic hg19 ACC TCGA-OR-A5KY 2 In-Frame Intra-chr q13.32 q13.32 Seq+ 58 ChimerSeq FusionScan TCGA_RNA-Seq ST3GAL2-VAC14 ST3GAL2 chr16 70472851 - VAC14 chr16 70806075 - Exonic hg19 ACC TCGA-OU-A5PI 3 5'UTR-CDS Intra-chr q22.1 q22.2 Seq+ 59 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPA2B1-HSD17B10 HNRNPA2B1 chr7 26240191 - HSD17B10 chrX 53460833 - Exonic hg19 ACC TCGA-OU-A5PI 3 In-Frame Inter-chr p15.2 p11.22 Seq+ 60 ChimerSeq FusionScan TCGA_RNA-Seq FHOD3-ELP2 FHOD3 chr18 33952707 + ELP2 chr18 33722788 + Exonic hg19 ACC TCGA-OU-A5PI 3 In-Frame Intra-chr q12.2 q12.2 Seq+ 61 ChimerSeq FusionScan TCGA_RNA-Seq PRLR-CLPTM1L PRLR chr5 35230369 - CLPTM1L chr5 1318568 - Exonic hg19 ACC TCGA-OR-A5J1 6 5'UTR-CDS Intra-chr p13.2 p15.33 Seq+ 62 ChimerSeq FusionScan TCGA_RNA-Seq KCTD5-TSC2 KCTD5 chr16 2747998 + TSC2 chr16 2136193 + Exonic hg19 ACC TCGA-OR-A5J1 3 In-Frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Seq+ 63 ChimerSeq FusionScan TCGA_RNA-Seq CIAPIN1-MRPL23 CIAPIN1 chr16 57481253 - MRPL23 chr11 1972128 + Exonic hg19 ACC TCGA-OR-A5J1 2 5'UTR-CDS Inter-chr q21 p15.5 64 ChimerSeq FusionScan TCGA_RNA-Seq TNPO1-MEF2C TNPO1 chr5 72112579 + MEF2C chr5 88057145 - Exonic hg19 ACC TCGA-OR-A5J1 2 In-Frame Intra-chr q13.2 q14.3 Transcription factor Seq+ 65 ChimerSeq FusionScan TCGA_RNA-Seq CWC27-PPAP2A CWC27 chr5 64181373 + PPAP2A chr5 54721867 - Exonic hg19 ACC TCGA-OR-A5J1 2 Out-of-Frame Intra-chr q12.3 Seq+ 66 ChimerSeq FusionScan TCGA_RNA-Seq DAB2-ARSB DAB2 chr5 39392466 - ARSB chr5 78265015 - Exonic hg19 ACC TCGA-OR-A5J1 2 In-Frame Intra-chr p13.1 Tumor suppressor gene q14.1 Seq+ 67 ChimerSeq FusionScan TCGA_RNA-Seq ERN1-TEX2 ERN1 chr17 62141345 - TEX2 chr17 62238293 - Exonic hg19 ACC TCGA-OR-A5K6 4 In-Frame Intra-chr q23.3 q23.3 Seq+ 68 ChimerSeq FusionScan TCGA_RNA-Seq PHF20-SPAG4 PHF20 chr20 34487570 + SPAG4 chr20 34207116 + Exonic hg19 ACC TCGA-OR-A5JT 2 In-Frame Intra-chr q11.22 Transcription factor q11.22 Seq+ 69 ChimerSeq FusionScan TCGA_RNA-Seq TTLL5-IFT43 TTLL5 chr14 76368567 + IFT43 chr14 76455227 + Exonic hg19 ACC TCGA-OR-A5LC 2 Out-of-Frame Intra-chr q24.3 q24.3 Seq+ 70 ChimerSeq FusionScan TCGA_RNA-Seq CYB5B-COTL1 CYB5B chr16 69458760 + COTL1 chr16 84600561 - Exonic hg19 ACC TCGA-OR-A5JF 2 In-Frame Intra-chr q22.1 q24.1 Seq+ 71 ChimerSeq FusionScan TCGA_RNA-Seq PARL-MRPL3 PARL chr3 183602509 - MRPL3 chr3 131190123 - Exonic hg19 ACC TCGA-OR-A5JF 2 In-Frame Intra-chr q27.1 q22.1 72 ChimerSeq FusionScan TCGA_RNA-Seq EIF4H-AARS2 EIF4H chr7 73588772 + AARS2 chr6 44280000 - Exonic hg19 ACC TCGA-OR-A5J8 9 Out-of-Frame Inter-chr q11.23 p21.1 Seq+ 73 ChimerSeq FusionScan TCGA_RNA-Seq AARS2-SPATS1 AARS2 chr6 44278730 - SPATS1 chr6 44328182 + Exonic hg19 ACC TCGA-OR-A5J8 5 In-Frame Intra-chr p21.1 p21.1 Seq+ 74 ChimerSeq FusionScan TCGA_RNA-Seq AARS2-SPATS1 AARS2 chr6 44278035 - SPATS1 chr6 44328182 + Exonic hg19 ACC TCGA-OR-A5J8 2 Out-of-Frame Intra-chr p21.1 p21.1 Seq+ 75 ChimerSeq FusionScan TCGA_RNA-Seq NSD1-EFNA5 NSD1 chr5 176619020 + EFNA5 chr5 106717077 - Exonic hg19 ACC TCGA-OR-A5JS 3 In-Frame Intra-chr q35.3 Oncogene q21.3 Tumor suppressor gene Seq+ 76 ChimerSeq FusionScan TCGA_RNA-Seq TLK2-CEP112 TLK2 chr17 60685509 + CEP112 chr17 63685336 - Exonic hg19 ACC TCGA-OR-A5JS 3 In-Frame Intra-chr q23.2 Other:TLK q24.1 Seq+ 77 ChimerSeq FusionScan TCGA_RNA-Seq GJC1-SKAP1 GJC1 chr17 42884761 - SKAP1 chr17 46266862 - Exonic hg19 ACC TCGA-OR-A5JS 2 5'UTR-CDS Intra-chr q21.31 q21.32 Seq+ 78 ChimerSeq FusionScan TCGA_RNA-Seq RAB40C-C16orf11 RAB40C chr16 668260 + C16orf11 chr16 613255 + Exonic hg19 ACC TCGA-OR-A5LO 3 CDS-5'UTR Intra-chr p13.3 Seq+ 79 ChimerSeq FusionScan TCGA_RNA-Seq QRICH1-ACOT1 QRICH1 chr3 49114141 - ACOT1 chr14 74009753 + Exonic hg19 ACC TCGA-OR-A5LO 3 In-Frame Inter-chr p21.31 q24.3 80 ChimerSeq FusionScan TCGA_RNA-Seq PGPEP1-ALPL PGPEP1 chr19 18453721 + ALPL chr1 21880470 + Exonic hg19 ACC TCGA-OR-A5LO 3 CDS-5'UTR Inter-chr p13.11 p36.12 Tumor suppressor gene Seq+ 81 ChimerSeq FusionScan TCGA_RNA-Seq PXN-PLA2G1B PXN chr12 120703419 - PLA2G1B chr12 120763823 - Exonic hg19 ACC TCGA-OR-A5LO 3 In-Frame Intra-chr q24.23 q24.31 Seq+ 82 ChimerSeq FusionScan TCGA_RNA-Seq ZNRF3-EMID1 ZNRF3 chr22 29280054 + EMID1 chr22 29610914 + Exonic hg19 ACC TCGA-OR-A5LO 2 Out-of-Frame Intra-chr q12.1 q12.2 Seq+ 83 ChimerSeq FusionScan TCGA_RNA-Seq RASSF3-DAZAP2 RASSF3 chr12 65004523 + DAZAP2 chr12 51634126 + Exonic hg19 ACC TCGA-OR-A5LO 2 Out-of-Frame Intra-chr q14.2 Tumor suppressor gene q13.13 Seq+ 84 ChimerSeq FusionScan TCGA_RNA-Seq CELF1-FNBP4 CELF1 chr11 47505004 - FNBP4 chr11 47741638 - Exonic hg19 ACC TCGA-OR-A5LO 2 In-Frame Intra-chr p11.2 p11.2 Seq+ 85 ChimerSeq FusionScan TCGA_RNA-Seq FCN2-COL5A1 FCN2 chr9 137778410 + COL5A1 chr9 137714843 + Exonic hg19 ACC TCGA-OR-A5LO 2 Out-of-Frame Intra-chr q34.3 q34.3 Seq+ 86 ChimerSeq FusionScan TCGA_RNA-Seq C5orf56-CCDC101 C5orf56 chr5 131755632 + CCDC101 chr16 28592375 + Exonic hg19 ACC TCGA-OR-A5JZ 2 5'UTR-5'UTR Inter-chr q31.1 Seq+ 87 ChimerSeq FusionScan TCGA_RNA-Seq GANAB-C11orf48 GANAB chr11 62407098 - C11orf48 chr11 62430805 - Exonic hg19 ACC TCGA-OR-A5LD 3 Out-of-Frame Intra-chr q12.3 Tumor suppressor gene Seq+ 88 ChimerSeq FusionScan TCGA_RNA-Seq GANAB-C11orf48 GANAB chr11 62414033 - C11orf48 chr11 62430805 - Exonic hg19 ACC TCGA-OR-A5LD 2 Out-of-Frame Intra-chr q12.3 Tumor suppressor gene Seq+ 89 ChimerSeq FusionScan TCGA_RNA-Seq TPM1-ALK TPM1 chr15 63354844 + ALK chr2 29446394 - Exonic hg19 BLCA TCGA-GV-A3QG 5 In-Frame Inter-chr q22.2 p23.1 TK:ALK Oncogene Seq+ 90 ChimerSeq FusionScan TCGA_RNA-Seq MYO5B-CCDC11 MYO5B chr18 47721136 - CCDC11 chr18 47788589 - Exonic hg19 BLCA TCGA-GV-A3JZ 3 In-Frame Intra-chr q21.1 Seq+ 91 ChimerSeq FusionScan TCGA_RNA-Seq RNF213-IL22RA1 RNF213 chr17 78237577 + IL22RA1 chr1 24465204 - Exonic hg19 BLCA TCGA-GV-A3JZ 2 In-Frame Inter-chr q25.3 Oncogene p36.11 Seq+ 92 ChimerSeq FusionScan TCGA_RNA-Seq MICALCL-USP47 MICALCL chr11 12348813 + USP47 chr11 11969491 + Exonic hg19 BLCA TCGA-GV-A3JZ 2 In-Frame Intra-chr p15.3 p15.3 Seq+ 93 ChimerSeq FusionScan TCGA_RNA-Seq PNPLA8-IMMP2L PNPLA8 chr7 108168500 - IMMP2L chr7 110603621 - Exonic hg19 BLCA TCGA-DK-A3IS 2 5'UTR-CDS Intra-chr q31.1 q31.1 94 ChimerSeq FusionScan TCGA_RNA-Seq TAF4-LAMA5 TAF4 chr20 60639506 - LAMA5 chr20 60885367 - Exonic hg19 BLCA TCGA-GV-A3QF 3 In-Frame Intra-chr q13.33 Seq+ 95 ChimerSeq FusionScan TCGA_RNA-Seq TK1-DNAH17 TK1 chr17 76171130 - DNAH17 chr17 76423189 - Exonic hg19 BLCA TCGA-GV-A3QF 2 In-Frame Intra-chr q25.3 q25.3 Seq+ 96 ChimerSeq FusionScan TCGA_RNA-Seq TAF4-LAMA5 TAF4 chr20 60639506 - LAMA5 chr20 60885137 - Exonic hg19 BLCA TCGA-GV-A3QF 2 Out-of-Frame Intra-chr q13.33 Seq+ 97 ChimerSeq FusionScan TCGA_RNA-Seq RHPN2-PEPD RHPN2 chr19 33535154 - PEPD chr19 33904549 - Exonic hg19 BLCA TCGA-GV-A3QF 2 In-Frame Intra-chr q13.11 q13.11 Seq+ 98 ChimerSeq FusionScan TCGA_RNA-Seq HSF1-RIMS2 HSF1 chr8 145515556 + RIMS2 chr8 104709313 + Exonic hg19 BLCA TCGA-BT-A20X 2 Out-of-Frame Intra-chr q24.3 Transcription factor q22.3 99 ChimerSeq FusionScan TCGA_RNA-Seq VPS35-PHKB VPS35 chr16 46723042 - PHKB chr16 47730291 + Exonic hg19 BLCA TCGA-DK-A2I1 3 In-Frame Intra-chr q11.2 q12.1 Seq+ 100 ChimerSeq FusionScan TCGA_RNA-Seq C9orf3-C19orf24 C9orf3 chr9 97843062 + C19orf24 chr19 1277181 + Exonic hg19 BLCA TCGA-DK-A2I1 2 Out-of-Frame Inter-chr q22.32 p13.3 101 ChimerSeq FusionScan TCGA_RNA-Seq NFAT5-CCDC113 NFAT5 chr16 69602451 + CCDC113 chr16 58286630 + Exonic hg19 BLCA TCGA-DK-A2I1 2 Out-of-Frame Intra-chr q22.1 Transcription factor q21 Seq+ 102 ChimerSeq FusionScan TCGA_RNA-Seq IP6K1-RHOA IP6K1 chr3 49785250 - RHOA chr3 49413024 - Exonic hg19 BLCA TCGA-CU-A72E 5 CDS-5'UTR Intra-chr p21.31 p21.31 Oncogene Tumor suppressor gene Seq+ 103 ChimerSeq FusionScan TCGA_RNA-Seq RPS14-MB21D2 RPS14 chr5 149826364 - MB21D2 chr3 192517439 - Exonic hg19 BLCA TCGA-CU-A72E 3 Out-of-Frame Inter-chr q33.1 q29 Seq+ 104 ChimerSeq FusionScan TCGA_RNA-Seq RBMS1-PSMD14 RBMS1 chr2 161349799 - PSMD14 chr2 162223988 + Exonic hg19 BLCA TCGA-CU-A72E 2 In-Frame Intra-chr q24.2 q24.2 105 ChimerSeq FusionScan TCGA_RNA-Seq MAGED1-STAMBP MAGED1 chrX 51546213 + STAMBP chr2 74086380 + Exonic hg19 BLCA TCGA-KQ-A41O 2 5'UTR-CDS Inter-chr p11.22 p13.1 106 ChimerSeq FusionScan TCGA_RNA-Seq ATP6V0A1-STAT5A ATP6V0A1 chr17 40610981 + STAT5A chr17 40440073 + Exonic hg19 BLCA TCGA-BT-A20U 5 5'UTR-5'UTR Intra-chr q21.2 q21.2 Tumor suppressor gene Transcription factor Seq+ 107 ChimerSeq FusionScan TCGA_RNA-Seq PCBP2-ITGB7 PCBP2 chr12 53865591 + ITGB7 chr12 53585420 - Exonic hg19 BLCA TCGA-E7-A7PW 11 Out-of-Frame Intra-chr q13.13 q13.13 Seq+ 108 ChimerSeq FusionScan TCGA_RNA-Seq PROSC-ENO1 PROSC chr8 37623873 + ENO1 chr1 8925541 - Exonic hg19 BLCA TCGA-FT-A61P 2 In-Frame Inter-chr p36.23 Seq+ 109 ChimerSeq FusionScan TCGA_RNA-Seq SIN3A-FAM136A SIN3A chr15 75705103 - FAM136A chr2 70528112 - Exonic hg19 BLCA TCGA-FD-A3SL 2 In-Frame Inter-chr q24.2 p13.3 110 ChimerSeq FusionScan TCGA_RNA-Seq SCNN1B-FXYD3 SCNN1B chr16 23366810 + FXYD3 chr19 35613668 + Exonic hg19 BLCA TCGA-FD-A3SL 2 Out-of-Frame Inter-chr p12.2 q13.12 111 ChimerSeq FusionScan TCGA_RNA-Seq IKZF3-MED24 IKZF3 chr17 37985639 - MED24 chr17 38176186 - Exonic hg19 BLCA TCGA-FD-A3SL 2 In-Frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Seq+ 112 ChimerSeq FusionScan TCGA_RNA-Seq BCAT2-PPP1R12C BCAT2 chr19 49314240 - PPP1R12C chr19 55607703 - Exonic hg19 BLCA TCGA-FD-A3SL 2 In-Frame Intra-chr q13.33 q13.42 113 ChimerSeq FusionScan TCGA_RNA-Seq EHMT1-TMCO3 EHMT1 chr9 140513501 + TMCO3 chr13 114164552 + Exonic hg19 BLCA TCGA-FD-A3SL 2 In-Frame Inter-chr q34.3 q34 114 ChimerSeq FusionScan TCGA_RNA-Seq STAM2-NOSTRIN STAM2 chr2 153032116 - NOSTRIN chr2 169687981 + Exonic hg19 BLCA TCGA-GD-A3OS 3 Out-of-Frame Intra-chr q23.3 Seq+ 115 ChimerSeq FusionScan TCGA_RNA-Seq COL5A1-PTGES2 COL5A1 chr9 137677894 + PTGES2 chr9 130887720 - Exonic hg19 BLCA TCGA-GD-A3OS 2 In-Frame Intra-chr q34.3 q34.11 Seq+ 116 ChimerSeq FusionScan TCGA_RNA-Seq PDGFD-DCUN1D5 PDGFD chr11 104034531 - DCUN1D5 chr11 102933143 - Exonic hg19 BLCA TCGA-GD-A3OS 2 In-Frame Intra-chr q22.3 q22.3 Seq+ 117 ChimerSeq FusionScan TCGA_RNA-Seq TRA2B-ING1 TRA2B chr3 185643251 - ING1 chr13 111371575 + Exonic hg19 BLCA TCGA-GD-A3OS 2 Out-of-Frame Inter-chr q27.2 q34 Tumor suppressor gene 118 ChimerSeq FusionScan TCGA_RNA-Seq TRUB2-KCNT1 TRUB2 chr9 131083877 - KCNT1 chr9 138641943 + Exonic hg19 BLCA TCGA-GD-A3OS 2 Out-of-Frame Intra-chr q34.11 q34.3 Seq+ 119 ChimerSeq FusionScan TCGA_RNA-Seq CLOCK-UGT2A3 CLOCK chr4 56412948 - UGT2A3 chr4 69798477 - Exonic hg19 BLCA TCGA-GV-A3QH 4 5'UTR-5'UTR Intra-chr q12 Transcription factor Seq+ 120 ChimerSeq FusionScan TCGA_RNA-Seq MBOAT1-DCDC2 MBOAT1 chr6 20126747 - DCDC2 chr6 24302272 - Exonic hg19 BLCA TCGA-GV-A3QH 2 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 121 ChimerSeq FusionScan TCGA_RNA-Seq USP38-IL17F USP38 chr4 144119077 + IL17F chr6 52101966 - Exonic hg19 BLCA TCGA-GV-A3QH 2 Out-of-Frame Inter-chr q31.21 p12.2 Seq+ 122 ChimerSeq FusionScan TCGA_RNA-Seq ALCAM-SH3KBP1 ALCAM chr3 105086325 + SH3KBP1 chrX 19606920 - Exonic hg19 BLCA TCGA-GV-A3QH 2 In-Frame Inter-chr q13.11 p22.12 Seq+ 123 ChimerSeq FusionScan TCGA_RNA-Seq ADORA2B-SYN3 ADORA2B chr17 15848897 + SYN3 chr22 32992722 - Exonic hg19 BLCA TCGA-FD-A3B6 3 Out-of-Frame Inter-chr p12 q12.3 Seq+ 124 ChimerSeq FusionScan TCGA_RNA-Seq HMG20B-CNOT3 HMG20B chr19 3573798 + CNOT3 chr19 54657451 + Exonic hg19 BLCA TCGA-FD-A3B6 2 In-Frame Intra-chr p13.3 Transcription factor Tumor suppressor gene 125 ChimerSeq FusionScan TCGA_RNA-Seq FXYD3-TARM1 FXYD3 chr19 35610320 + TARM1 chr19 54579170 - Exonic hg19 BLCA TCGA-DK-A3X2 6 In-Frame Intra-chr q13.12 Seq+ 126 ChimerSeq FusionScan TCGA_RNA-Seq ZFP30-CEACAM7 ZFP30 chr19 38135510 - CEACAM7 chr19 42191152 - Exonic hg19 BLCA TCGA-DK-A3X2 3 In-Frame Intra-chr q13.12 Transcription factor Seq+ 127 ChimerSeq FusionScan TCGA_RNA-Seq SPEN-EFHD2 SPEN chr1 16174645 + EFHD2 chr1 15752366 + Exonic hg19 BLCA TCGA-DK-A3X2 3 In-Frame Intra-chr p36.21 Transcription factor p36.21 Seq+ 128 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-LINC00578 TBL1XR1 chr3 176914908 - LINC00578 chr3 177257182 + Exonic hg19 BLCA TCGA-DK-A3X2 3 5'UTR-5'UTR Intra-chr q26.32 q26.32 Seq+ 129 ChimerSeq FusionScan TCGA_RNA-Seq CD44-PDHX CD44 chr11 35223334 + PDHX chr11 34952950 + Exonic hg19 BLCA TCGA-DK-A3X2 2 In-Frame Intra-chr p13 Oncogene Tumor suppressor gene p13 Seq+ 130 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-LINC00578 TBL1XR1 chr3 176914908 - LINC00578 chr3 177347204 + Exonic hg19 BLCA TCGA-DK-A3X2 2 5'UTR-5'UTR Intra-chr q26.32 q26.32 Seq+ 131 ChimerSeq FusionScan TCGA_RNA-Seq AZIN1-NDRG1 AZIN1 chr8 103876034 - NDRG1 chr8 134276895 - Exonic hg19 BLCA TCGA-DK-A3X2 2 5'UTR-CDS Intra-chr q22.3 q24.22 Tumor suppressor gene 132 ChimerSeq FusionScan TCGA_RNA-Seq NOTCH1-EGFL7 NOTCH1 chr9 139438475 - EGFL7 chr9 139562692 + Exonic hg19 BLCA TCGA-CF-A3MH 2 CDS-5'UTR Intra-chr q34.3 Oncogene Tumor suppressor gene q34.3 133 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1244-C6orf62 KIAA1244 chr6 138584748 + C6orf62 chr6 24709139 - Exonic hg19 BLCA TCGA-CF-A3MH 2 Out-of-Frame Intra-chr p22.3 134 ChimerSeq FusionScan TCGA_RNA-Seq EDEM3-DKFZP564C196 EDEM3 chr1 184692884 - DKFZP564C196 chr1 183430803 - Exonic hg19 BLCA TCGA-2F-A9KQ 4 CDS-3'UTR Intra-chr q25.3 135 ChimerSeq FusionScan TCGA_RNA-Seq TTLL5-IFT43 TTLL5 chr14 76368567 + IFT43 chr14 76455227 + Exonic hg19 BLCA TCGA-2F-A9KQ 2 Out-of-Frame Intra-chr q24.3 q24.3 Seq+ 136 ChimerSeq FusionScan TCGA_RNA-Seq TPX2-HM13 TPX2 chr20 30327424 + HM13 chr20 30115286 + Exonic hg19 BLCA TCGA-GC-A3I6 5 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 137 ChimerSeq FusionScan TCGA_RNA-Seq DDX17-FBLN1 DDX17 chr22 38901955 - FBLN1 chr22 45937108 + Exonic hg19 BLCA TCGA-GC-A3I6 2 Out-of-Frame Intra-chr q13.1 q13.31 Tumor suppressor gene 138 ChimerSeq FusionScan TCGA_RNA-Seq HM13-BCL2L1 HM13 chr20 30126064 + BCL2L1 chr20 30253889 - Exonic hg19 BLCA TCGA-GC-A3I6 2 Out-of-Frame Intra-chr q11.21 q11.21 Oncogene Seq+ 139 ChimerSeq FusionScan TCGA_RNA-Seq ZNF564-COL5A3 ZNF564 chr19 12662143 - COL5A3 chr19 10112557 - Exonic hg19 BLCA TCGA-GV-A40G 2 In-Frame Intra-chr p13.2 Transcription factor p13.2 Seq+ 140 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 BLCA TCGA-GU-A42P 3 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 141 ChimerSeq FusionScan TCGA_RNA-Seq ACTN4-LGALS7B ACTN4 chr19 39138547 + LGALS7B chr19 39281328 + Exonic hg19 BLCA TCGA-KQ-A41N 3 Out-of-Frame Intra-chr Seq+ 142 ChimerSeq FusionScan TCGA_RNA-Seq C6orf132-GUCA1B C6orf132 chr6 42077953 - GUCA1B chr6 42156469 - Exonic hg19 BLCA TCGA-DK-A3IT 2 Out-of-Frame Intra-chr p21.1 p21.1 Seq+ 143 ChimerSeq FusionScan TCGA_RNA-Seq CEBPG-TDRD12 CEBPG chr19 33864801 + TDRD12 chr19 33239381 + Exonic hg19 BLCA TCGA-DK-A1A3 4 5'UTR-CDS Intra-chr q13.11 Transcription factor q13.11 Seq+ 144 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57725762 + VMP1 chr17 57915655 + Exonic hg19 BLCA TCGA-FD-A5BV 2 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 145 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-ZNF280D CPSF6 chr12 69656342 + ZNF280D chr15 56935195 - Exonic hg19 BLCA TCGA-G2-A2EK 2 3'UTR-CDS Inter-chr q15 q21.3 Transcription factor 146 ChimerSeq FusionScan TCGA_RNA-Seq CEP57-DLG2 CEP57 chr11 95552068 + DLG2 chr11 84996409 - Exonic hg19 BLCA TCGA-ZF-A9R7 2 Out-of-Frame Intra-chr q21 q14.1 Seq+ 147 ChimerSeq FusionScan TCGA_RNA-Seq PRUNE-LCE2A PRUNE chr1 150990380 + LCE2A chr1 152671357 + Exonic hg19 BLCA TCGA-UY-A78N 3 CDS-5'UTR Intra-chr q21.3 Seq+ 148 ChimerSeq FusionScan TCGA_RNA-Seq UBE4B-APITD1 UBE4B chr1 10093752 + APITD1 chr1 10493898 + Exonic hg19 BLCA TCGA-UY-A78N 2 In-Frame Intra-chr p36.22 Tumor suppressor gene Tumor suppressor gene Seq+ 149 ChimerSeq FusionScan TCGA_RNA-Seq VGLL4-LIMD1 VGLL4 chr3 11744444 - LIMD1 chr3 45707141 + Exonic hg19 BLCA TCGA-BL-A0C8 5 In-Frame Intra-chr p25.2 p21.31 Tumor suppressor gene Seq+ 150 ChimerSeq FusionScan TCGA_RNA-Seq GPC3-PPARG GPC3 chrX 133087076 - PPARG chr3 12421202 + Exonic hg19 BLCA TCGA-BL-A0C8 3 In-Frame Inter-chr q26.2 Tumor suppressor gene p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 151 ChimerSeq FusionScan TCGA_RNA-Seq PCP4L1-NDUFS2 PCP4L1 chr1 161228773 + NDUFS2 chr1 161183169 + Exonic hg19 BLCA TCGA-BL-A0C8 2 In-Frame Intra-chr q23.3 q23.3 Seq+ 152 ChimerSeq FusionScan TCGA_RNA-Seq CD151-EPS8L2 CD151 chr11 836843 + EPS8L2 chr11 710421 + Exonic hg19 BLCA TCGA-BL-A0C8 2 Out-of-Frame Intra-chr p15.5 p15.5 Seq+ 153 ChimerSeq FusionScan TCGA_RNA-Seq SNX30-PXT1 SNX30 chr9 115600977 + PXT1 chr6 36393868 - Exonic hg19 BLCA TCGA-BL-A0C8 2 CDS-5'UTR Inter-chr q32 p21.31 Seq+ 154 ChimerSeq FusionScan TCGA_RNA-Seq HMGCS1-BUD13 HMGCS1 chr5 43298619 - BUD13 chr11 116629123 - Exonic hg19 BLCA TCGA-BT-A2LA 2 In-Frame Inter-chr p12 q23.3 155 ChimerSeq FusionScan TCGA_RNA-Seq FECH-C1orf130 FECH chr18 55247304 - C1orf130 chr1 24921914 + Exonic hg19 BLCA TCGA-BT-A2LA 2 CDS-5'UTR Inter-chr q21.31 Seq+ 156 ChimerSeq FusionScan TCGA_RNA-Seq STK24-TMTC4 STK24 chr13 99228998 - TMTC4 chr13 101258681 - Exonic hg19 BLCA TCGA-BT-A2LA 2 In-Frame Intra-chr q32.2 q32.3 Seq+ 157 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1737-C14orf166B KIAA1737 chr14 77564704 + C14orf166B chr14 77332310 + Exonic hg19 BLCA TCGA-CF-A7I0 2 5'UTR-CDS Intra-chr Seq+ 158 ChimerSeq FusionScan TCGA_RNA-Seq HSD17B7-CEBPZ HSD17B7 chr1 162760625 + CEBPZ chr2 37439535 - Exonic hg19 BLCA TCGA-CF-A7I0 2 Out-of-Frame Inter-chr q23.3 p22.2 Transcription factor 159 ChimerSeq FusionScan TCGA_RNA-Seq PGAP3-STARD3 PGAP3 chr17 37840849 - STARD3 chr17 37813260 + Exonic hg19 BLCA TCGA-DK-A2I6 4 In-Frame Intra-chr q12 Oncogene q12 Seq+ 160 ChimerSeq FusionScan TCGA_RNA-Seq RBBP8-TP53 RBBP8 chr18 20596887 + TP53 chr17 7579940 - Exonic hg19 BLCA TCGA-DK-A2I6 3 CDS-5'UTR Inter-chr q11.2 Tumor suppressor gene p13.1 Oncogene Tumor suppressor gene Transcription factor Seq+ 161 ChimerSeq FusionScan TCGA_RNA-Seq MTSS1-ERBB2 MTSS1 chr8 125740124 - ERBB2 chr17 37863242 + Exonic hg19 BLCA TCGA-DK-A2I6 3 Out-of-Frame Inter-chr q24.13 Tumor suppressor gene q12 Oncogene Seq+ 162 ChimerSeq FusionScan TCGA_RNA-Seq CAB39L-CPQ CAB39L chr13 49924879 - CPQ chr8 97847200 + Exonic hg19 BLCA TCGA-DK-A2I6 2 Out-of-Frame Inter-chr q14.2 q22.1 Seq+ 163 ChimerSeq FusionScan TCGA_RNA-Seq AGK-NDUFB2 AGK chr7 141255367 + NDUFB2 chr7 140402665 + Exonic hg19 BLCA TCGA-CF-A3MI 3 In-Frame Intra-chr q34 Seq+ 164 ChimerSeq FusionScan TCGA_RNA-Seq PLAU-C10orf55 PLAU chr10 75672856 + C10orf55 chr10 75672833 - Exonic hg19 BLCA TCGA-FD-A3B4 2 CDS-5'UTR Intra-chr q22.2 q22.2 165 ChimerSeq FusionScan TCGA_RNA-Seq DHRS7B-CUEDC1 DHRS7B chr17 21030304 + CUEDC1 chr17 55963240 - Exonic hg19 BLCA TCGA-K4-A6FZ 2 CDS-5'UTR Intra-chr p11.2 q22 166 ChimerSeq FusionScan TCGA_RNA-Seq TLK2-THRA TLK2 chr17 60613698 + THRA chr17 38240087 + Exonic hg19 BLCA TCGA-FD-A43P 3 In-Frame Intra-chr q23.2 Other:TLK q21.1 Tumor suppressor gene Transcription factor Seq+ 167 ChimerSeq FusionScan TCGA_RNA-Seq C6orf203-PDSS2 C6orf203 chr6 107361434 + PDSS2 chr6 107475981 - Exonic hg19 BLCA TCGA-FD-A43P 2 Out-of-Frame Intra-chr q21 q21 Tumor suppressor gene Seq+ 168 ChimerSeq FusionScan TCGA_RNA-Seq TAOK1-RB1CC1 TAOK1 chr17 27809306 + RB1CC1 chr8 53555372 - Exonic hg19 BLCA TCGA-DK-A1AC 4 Out-of-Frame Inter-chr q11.2 q11.23 Tumor suppressor gene Seq+ 169 ChimerSeq FusionScan TCGA_RNA-Seq PCMTD1-RHOT1 PCMTD1 chr8 52811489 - RHOT1 chr17 30509775 + Exonic hg19 BLCA TCGA-DK-A1AC 2 5'UTR-CDS Inter-chr q11.23 q11.2 Seq+ 170 ChimerSeq FusionScan TCGA_RNA-Seq PCMTD1-RHOT1 PCMTD1 chr8 52773404 - RHOT1 chr17 30509775 + Exonic hg19 BLCA TCGA-DK-A1AC 2 Out-of-Frame Inter-chr q11.23 q11.2 Seq+ 171 ChimerSeq FusionScan TCGA_RNA-Seq TGFB1-FXYD5 TGFB1 chr19 41838032 - FXYD5 chr19 35655058 + Exonic hg19 BLCA TCGA-FD-A3SO 2 Out-of-Frame Intra-chr q13.2 Tumor suppressor gene q13.12 Seq+ 172 ChimerSeq FusionScan TCGA_RNA-Seq SENP5-MGST1 SENP5 chr3 196630481 + MGST1 chr12 16510538 + Exonic hg19 BLCA TCGA-FD-A3SO 2 In-Frame Inter-chr q29 p12.3 173 ChimerSeq FusionScan TCGA_RNA-Seq XPO6-FBXO31 XPO6 chr16 28222686 - FBXO31 chr16 87393972 - Exonic hg19 BLCA TCGA-E5-A4TZ 2 Out-of-Frame Intra-chr p12.1 q24.2 Tumor suppressor gene Seq+ 174 ChimerSeq FusionScan TCGA_RNA-Seq FBXO31-ZNRF1 FBXO31 chr16 87393900 - ZNRF1 chr16 75127469 + Exonic hg19 BLCA TCGA-E5-A4TZ 2 In-Frame Intra-chr q24.2 Tumor suppressor gene q23.1 Seq+ 175 ChimerSeq FusionScan TCGA_RNA-Seq GAS5-IFI16 GAS5 chr1 173835898 - IFI16 chr1 159002313 + Exonic hg19 BLCA TCGA-DK-A3X1 7 3'UTR-CDS Intra-chr q25.1 Tumor suppressor gene q23.1 Tumor suppressor gene Seq+ 176 ChimerSeq FusionScan TCGA_RNA-Seq OSBPL5-MAD1L1 OSBPL5 chr11 3186445 - MAD1L1 chr7 1976533 - Exonic hg19 BLCA TCGA-DK-A3X1 2 5'UTR-CDS Inter-chr p15.4 p22.3 Tumor suppressor gene 177 ChimerSeq FusionScan TCGA_RNA-Seq UTRN-SYTL2 UTRN chr6 145148522 + SYTL2 chr11 85429886 - Exonic hg19 BLCA TCGA-DK-A3X1 2 Out-of-Frame Inter-chr q24.2 q14.1 178 ChimerSeq FusionScan TCGA_RNA-Seq NFX1-C3orf67 NFX1 chr9 33290595 + C3orf67 chr3 58792182 - Exonic hg19 BLCA TCGA-DK-A3X1 2 Out-of-Frame Inter-chr p13.3 Transcription factor p14.2 179 ChimerSeq FusionScan TCGA_RNA-Seq BCL2L1-FLJ43681 BCL2L1 chr20 30309457 - FLJ43681 chr17 81187692 + Exonic hg19 BLCA TCGA-DK-A3X1 2 CDS-5'UTR Inter-chr q11.21 Oncogene Seq+ 180 ChimerSeq FusionScan TCGA_RNA-Seq CDS1-UGT1A4 CDS1 chr4 85530678 + UGT1A4 chr2 234675679 + Exonic hg19 BLCA TCGA-2F-A9KW 2 In-Frame Inter-chr q21.23 Tumor suppressor gene q37.1 Seq+ 181 ChimerSeq FusionScan TCGA_RNA-Seq RTN4-SUCLG1 RTN4 chr2 55276880 - SUCLG1 chr2 84676876 - Exonic hg19 BLCA TCGA-2F-A9KW 2 In-Frame Intra-chr p16.1 Tumor suppressor gene p11.2 182 ChimerSeq FusionScan TCGA_RNA-Seq CDKN2A-CAPZB CDKN2A chr9 21974676 - CAPZB chr1 19671746 - Exonic hg19 BLCA TCGA-E7-A6MD 7 In-Frame Inter-chr p21.3 Oncogene Tumor suppressor gene p36.13 Seq+ 183 ChimerSeq FusionScan TCGA_RNA-Seq SRGAP1-KCNMB4 SRGAP1 chr12 64238663 + KCNMB4 chr12 70793988 + Exonic hg19 BLCA TCGA-BT-A42C 4 Out-of-Frame Intra-chr q14.2 q15 Seq+ 184 ChimerSeq FusionScan TCGA_RNA-Seq FCHSD2-PPFIA1 FCHSD2 chr11 72851075 - PPFIA1 chr11 70194294 + Exonic hg19 BLCA TCGA-BT-A42C 2 In-Frame Intra-chr q13.4 q13.3 Seq+ 185 ChimerSeq FusionScan TCGA_RNA-Seq CD44-PDHX CD44 chr11 35198287 + PDHX chr11 34988186 + Exonic hg19 BLCA TCGA-ZF-AA4V 5 In-Frame Intra-chr p13 Oncogene Tumor suppressor gene p13 Seq+ 186 ChimerSeq FusionScan TCGA_RNA-Seq NIPBL-MRPS30 NIPBL chr5 36877280 + MRPS30 chr5 44811110 + Exonic hg19 BLCA TCGA-ZF-AA4V 2 5'UTR-CDS Intra-chr p13.2 p12 Seq+ 187 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-CHMP1A CPSF6 chr12 69656342 + CHMP1A chr16 89713739 - Exonic hg19 BLCA TCGA-ZF-AA4V 2 3'UTR-3'UTR Inter-chr q15 q24.3 Seq+ 188 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57737949 + VMP1 chr17 57895072 + Exonic hg19 BLCA TCGA-ZF-AA4V 2 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 189 ChimerSeq FusionScan TCGA_RNA-Seq NCOA7-HINT3 NCOA7 chr6 126112213 + HINT3 chr6 126288032 + Exonic hg19 BLCA TCGA-HQ-A5ND 2 5'UTR-CDS Intra-chr q22.31 q22.32 Seq+ 190 ChimerSeq FusionScan TCGA_RNA-Seq PCP4L1-NDUFS2 PCP4L1 chr1 161228773 + NDUFS2 chr1 161183169 + Exonic hg19 BLCA TCGA-BL-A0C8 6 In-Frame Intra-chr q23.3 q23.3 Seq+ 191 ChimerSeq FusionScan TCGA_RNA-Seq VGLL4-LIMD1 VGLL4 chr3 11744444 - LIMD1 chr3 45707141 + Exonic hg19 BLCA TCGA-BL-A0C8 6 In-Frame Intra-chr p25.2 p21.31 Tumor suppressor gene Seq+ 192 ChimerSeq FusionScan TCGA_RNA-Seq DIP2B-SPATS2 DIP2B chr12 51108379 + SPATS2 chr12 49919726 + Exonic hg19 BLCA TCGA-BL-A0C8 3 Out-of-Frame Intra-chr q13.12 q13.12 Seq+ 193 ChimerSeq FusionScan TCGA_RNA-Seq GPC3-PPARG GPC3 chrX 133087076 - PPARG chr3 12421202 + Exonic hg19 BLCA TCGA-BL-A0C8 2 In-Frame Inter-chr q26.2 Tumor suppressor gene p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 194 ChimerSeq FusionScan TCGA_RNA-Seq MIER2-CDK5RAP1 MIER2 chr19 325634 - CDK5RAP1 chr20 31975339 - Exonic hg19 BLCA TCGA-BL-A0C8 2 In-Frame Inter-chr p13.3 q11.21 Seq+ 195 ChimerSeq FusionScan TCGA_RNA-Seq SNX30-PXT1 SNX30 chr9 115600977 + PXT1 chr6 36393868 - Exonic hg19 BLCA TCGA-BL-A0C8 2 CDS-5'UTR Inter-chr q32 p21.31 Seq+ 196 ChimerSeq FusionScan TCGA_RNA-Seq SSH1-IFT81 SSH1 chr12 109246413 - IFT81 chr12 110565164 + Exonic hg19 BLCA TCGA-ZF-A9RM 3 CDS-5'UTR Intra-chr q24.11 q24.11 Seq+ 197 ChimerSeq FusionScan TCGA_RNA-Seq KANK1-DMRT1 KANK1 chr9 504754 + DMRT1 chr9 893911 + Exonic hg19 BLCA TCGA-ZF-A9RM 3 5'UTR-CDS Intra-chr p24.3 Tumor suppressor gene p24.3 Transcription factor Seq+ 198 ChimerSeq FusionScan TCGA_RNA-Seq CCNT1-LALBA CCNT1 chr12 49099550 - LALBA chr12 48961800 - Exonic hg19 BLCA TCGA-ZF-A9RM 3 Out-of-Frame Intra-chr q13.12 q13.11 Seq+ 199 ChimerSeq FusionScan TCGA_RNA-Seq PPP6R3-SHANK2 PPP6R3 chr11 68343511 + SHANK2 chr11 70858384 - Exonic hg19 BLCA TCGA-FD-A62S 2 CDS-5'UTR Intra-chr q13.2 q13.4 Seq+ 200 ChimerSeq FusionScan TCGA_RNA-Seq DHRS12-RASL11A DHRS12 chr13 52373669 - RASL11A chr13 27845620 + Exonic hg19 BLCA TCGA-GC-A3RC 3 Out-of-Frame Intra-chr q14.3 q12.2 Tumor suppressor gene Seq+ 201 ChimerSeq FusionScan TCGA_RNA-Seq PEX5-PRB1 PEX5 chr12 7351709 + PRB1 chr12 11504863 - Exonic hg19 BLCA TCGA-GU-A767 2 CDS-3'UTR Intra-chr p13.31 Tumor suppressor gene Seq+ 202 ChimerSeq FusionScan TCGA_RNA-Seq MYOF-NDUFA6 MYOF chr10 95211806 - NDUFA6 chr22 42483179 - Exonic hg19 BLCA TCGA-GU-A767 2 Out-of-Frame Inter-chr q23.33 203 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF7-KLF10 ARHGEF7 chr13 111896641 + KLF10 chr8 103664625 - Exonic hg19 BLCA TCGA-FD-A3SJ 2 Out-of-Frame Inter-chr q34 q22.3 Tumor suppressor gene Transcription factor Seq+ 204 ChimerSeq FusionScan TCGA_RNA-Seq HERC4-CDKAL1 HERC4 chr10 69792534 - CDKAL1 chr6 21000457 + Exonic hg19 BLCA TCGA-FD-A3SJ 2 In-Frame Inter-chr q21.3 p22.3 Seq+ 205 ChimerSeq FusionScan TCGA_RNA-Seq SRGAP2P2-RASSF5 SRGAP2P2 chr1 143916308 + RASSF5 chr1 206711500 + Exonic hg19 BLCA TCGA-FD-A3SJ 2 5'UTR-CDS Intra-chr q32.1 Tumor suppressor gene 206 ChimerSeq FusionScan TCGA_RNA-Seq PPARG-SYN2 PPARG chr3 12353952 + SYN2 chr3 12192736 + Exonic hg19 BLCA TCGA-FD-A3SJ 2 5'UTR-CDS Intra-chr p25.2 Oncogene Tumor suppressor gene Transcription factor p25.2 Seq+ 207 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R5D-UBR2 PPP2R5D chr6 42957426 + UBR2 chr6 42652531 + Exonic hg19 BLCA TCGA-FD-A3SJ 2 Out-of-Frame Intra-chr p21.1 p21.1 Seq+ 208 ChimerSeq FusionScan TCGA_RNA-Seq YIPF1-MRPL15 YIPF1 chr1 54348785 - MRPL15 chr8 55059941 + Exonic hg19 BLCA TCGA-FD-A3SJ 2 Out-of-Frame Inter-chr p32.3 q11.23 Seq+ 209 ChimerSeq FusionScan TCGA_RNA-Seq CMIP-BCMO1 CMIP chr16 81479146 + BCMO1 chr16 81279079 + Exonic hg19 BLCA TCGA-FD-A3SJ 2 Out-of-Frame Intra-chr q23.2 Seq+ 210 ChimerSeq FusionScan TCGA_RNA-Seq TULP4-ZDHHC14 TULP4 chr6 158735300 + ZDHHC14 chr6 158068290 + Exonic hg19 BLCA TCGA-FD-A3SJ 2 In-Frame Intra-chr q25.3 q25.3 Seq+ 211 ChimerSeq FusionScan TCGA_RNA-Seq MPP5-GPHN MPP5 chr14 67779427 + GPHN chr14 67646294 + Exonic hg19 BLCA TCGA-FD-A3N6 2 Out-of-Frame Intra-chr q23.3 q23.3 Seq+ 212 ChimerSeq FusionScan TCGA_RNA-Seq UBR4-CAPNS1 UBR4 chr1 19510304 - CAPNS1 chr19 36640479 + Exonic hg19 BLCA TCGA-FD-A3SN 2 Out-of-Frame Inter-chr p36.13 q13.12 213 ChimerSeq FusionScan TCGA_RNA-Seq RBM17-PSAP RBM17 chr10 6131156 + PSAP chr10 73594262 - Exonic hg19 BLCA TCGA-CU-A0YO 3 5'UTR-CDS Intra-chr p15.1 q22.1 Seq+ 214 ChimerSeq FusionScan TCGA_RNA-Seq PEX14-TARDBP PEX14 chr1 10659423 + TARDBP chr1 11082180 + Exonic hg19 BLCA TCGA-DK-A2I2 2 Out-of-Frame Intra-chr p36.22 p36.22 215 ChimerSeq FusionScan TCGA_RNA-Seq FZD6-DPYS FZD6 chr8 104312512 + DPYS chr8 105405219 - Exonic hg19 BLCA TCGA-LC-A66R 3 Out-of-Frame Intra-chr q22.3 q22.3 Seq+ 216 ChimerSeq FusionScan TCGA_RNA-Seq OSBPL2-CDH4 OSBPL2 chr20 60813653 + CDH4 chr20 60485477 + Exonic hg19 BLCA TCGA-GC-A3RB 4 5'UTR-CDS Intra-chr q13.33 q13.33 Tumor suppressor gene Seq+ 217 ChimerSeq FusionScan TCGA_RNA-Seq PTGES2-MLXIP PTGES2 chr9 130884640 - MLXIP chr12 122626237 + Exonic hg19 BLCA TCGA-GC-A3RB 2 Out-of-Frame Inter-chr q34.11 Transcription factor Seq+ 218 ChimerSeq FusionScan TCGA_RNA-Seq CDC5L-TMEM63B CDC5L chr6 44376369 + TMEM63B chr6 44102297 + Exonic hg19 BLCA TCGA-GC-A3RB 2 5'UTR-5'UTR Intra-chr p21.1 Transcription factor p21.1 Seq+ 219 ChimerSeq FusionScan TCGA_RNA-Seq ZNF638-C2orf78 ZNF638 chr2 71558995 + C2orf78 chr2 74040603 + Exonic hg19 BLCA TCGA-FD-A3SM 4 5'UTR-CDS Intra-chr p13.3 p13.1 Seq+ 220 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-PPP1CB RCC1 chr1 28832596 + PPP1CB chr2 29006772 + Exonic hg19 BLCA TCGA-FD-A3SM 2 5'UTR-CDS Inter-chr p35.3 p23.2 221 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BLCA TCGA-FD-A3SM 2 Out-of-Frame Intra-chr q22.2 q22.2 222 ChimerSeq FusionScan TCGA_RNA-Seq YWHAB-ISPD YWHAB chr20 43514527 + ISPD chr7 16348252 - Exonic hg19 BLCA TCGA-KQ-A41Q 2 5'UTR-CDS Inter-chr q13.12 p21.2 Seq+ 223 ChimerSeq FusionScan TCGA_RNA-Seq STXBP6-SLC44A4 STXBP6 chr14 25443870 - SLC44A4 chr6 31844859 - Exonic hg19 BLCA TCGA-KQ-A41Q 2 CDS-5'UTR Inter-chr q12 Seq+ 224 ChimerSeq FusionScan TCGA_RNA-Seq NPAS2-C2orf29 NPAS2 chr2 101565942 + C2orf29 chr2 101879000 + Exonic hg19 BLCA TCGA-DK-A3IK 2 In-Frame Intra-chr q11.2 Tumor suppressor gene Transcription factor 225 ChimerSeq FusionScan TCGA_RNA-Seq DIP2A-C16orf46 DIP2A chr21 47904741 + C16orf46 chr16 81087699 - Exonic hg19 BLCA TCGA-FD-A5C0 2 Out-of-Frame Inter-chr q22.3 q23.2 Seq+ 226 ChimerSeq FusionScan TCGA_RNA-Seq PTEN-RNLS PTEN chr10 89693008 + RNLS chr10 90045263 - Exonic hg19 BLCA TCGA-ZF-A9RE 2 In-Frame Intra-chr q23.31 Oncogene Tumor suppressor gene q23.31 Seq+ 227 ChimerSeq FusionScan TCGA_RNA-Seq ZBED1-HN1 ZBED1 chrY 2368857 - HN1 chr17 73132345 - Exonic hg19 BLCA TCGA-CU-A5W6 2 5'UTR-CDS Inter-chr p22.33 Transcription factor 228 ChimerSeq FusionScan TCGA_RNA-Seq CRADD-FNDC3B CRADD chr12 94072848 + FNDC3B chr3 171944660 + Exonic hg19 BLCA TCGA-CU-A5W6 2 In-Frame Inter-chr q22 q26.31 229 ChimerSeq FusionScan TCGA_RNA-Seq STAU1-UBAC1 STAU1 chr20 47790731 - UBAC1 chr9 138831605 - Exonic hg19 BLCA TCGA-CU-A5W6 2 5'UTR-CDS Inter-chr q13.13 q34.3 230 ChimerSeq FusionScan TCGA_RNA-Seq TEAD3-EEF1D TEAD3 chr6 35464674 - EEF1D chr8 144669022 - Exonic hg19 BLCA TCGA-CU-A5W6 2 5'UTR-5'UTR Inter-chr p21.31 Transcription factor 231 ChimerSeq FusionScan TCGA_RNA-Seq GAK-LUC7L3 GAK chr4 925830 - LUC7L3 chr17 48814320 + Exonic hg19 BLCA TCGA-CU-A5W6 2 Out-of-Frame Inter-chr p16.3 Other:NAK q21.33 Seq+ 232 ChimerSeq FusionScan TCGA_RNA-Seq RALY-TTI1 RALY chr20 32619410 + TTI1 chr20 36634799 - Exonic hg19 BLCA TCGA-2F-A9KT 3 5'UTR-CDS Intra-chr q11.22 q11.23 Seq+ 233 ChimerSeq FusionScan TCGA_RNA-Seq ZNF598-C16orf62 ZNF598 chr16 2059524 - C16orf62 chr16 19702674 + Exonic hg19 BLCA TCGA-HQ-A2OE 5 Out-of-Frame Intra-chr p13.3 Transcription factor p12.3 Seq+ 234 ChimerSeq FusionScan TCGA_RNA-Seq SSBP3-EDA SSBP3 chr1 54867533 - EDA chrX 69080687 + Exonic hg19 BLCA TCGA-HQ-A2OE 3 In-Frame Inter-chr p32.3 q13.1 Seq+ 235 ChimerSeq FusionScan TCGA_RNA-Seq NFAT5-CYB5B NFAT5 chr16 69602451 + CYB5B chr16 69492995 + Exonic hg19 BLCA TCGA-HQ-A2OE 2 Out-of-Frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 236 ChimerSeq FusionScan TCGA_RNA-Seq CNPY2-ABCD3 CNPY2 chr12 56708634 - ABCD3 chr1 94964157 + Exonic hg19 BLCA TCGA-HQ-A2OE 2 In-Frame Inter-chr q13.3 p21.3 237 ChimerSeq FusionScan TCGA_RNA-Seq ZNF544-CCDC61 ZNF544 chr19 58758160 + CCDC61 chr19 46506265 + Exonic hg19 BLCA TCGA-HQ-A2OE 2 In-Frame Intra-chr q13.43 Transcription factor q13.32 Seq+ 238 ChimerSeq FusionScan TCGA_RNA-Seq EHMT1-ARRDC1 EHMT1 chr9 140513501 + ARRDC1 chr9 140507347 + Exonic hg19 BLCA TCGA-HQ-A2OE 2 Out-of-Frame Intra-chr q34.3 q34.3 Seq+ 239 ChimerSeq FusionScan TCGA_RNA-Seq EPHX2-PTK2B EPHX2 chr8 27375589 + PTK2B chr8 27308265 + Exonic hg19 BLCA TCGA-HQ-A2OE 2 In-Frame Intra-chr p21.2 p21.2 Seq+ 240 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57733388 + VMP1 chr17 57915655 + Exonic hg19 BLCA TCGA-FD-A6TD 4 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 241 ChimerSeq FusionScan TCGA_RNA-Seq TRAF7-MAPK8IP3 TRAF7 chr16 2214002 + MAPK8IP3 chr16 1816904 + Exonic hg19 BLCA TCGA-FD-A6TD 2 Out-of-Frame Intra-chr p13.3 Oncogene p13.3 Seq+ 242 ChimerSeq FusionScan TCGA_RNA-Seq HMGA2-MSRB3 HMGA2 chr12 66221867 + MSRB3 chr12 65856934 + Exonic hg19 BLCA TCGA-G2-A2ES 5 In-Frame Intra-chr q14.3 Transcription factor q14.3 Seq+ 243 ChimerSeq FusionScan TCGA_RNA-Seq ELP2-FHOD3 ELP2 chr18 33718389 + FHOD3 chr18 34081894 + Exonic hg19 BLCA TCGA-G2-A2ES 2 In-Frame Intra-chr q12.2 q12.2 Seq+ 244 ChimerSeq FusionScan TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105614952 - OBFC1 chr10 105670380 - Exonic hg19 BLCA TCGA-UY-A9PB 2 Out-of-Frame Intra-chr q24.33 Seq+ 245 ChimerSeq FusionScan TCGA_RNA-Seq HIRA-MRPL40 HIRA chr22 19418962 - MRPL40 chr22 19420787 + Exonic hg19 BLCA TCGA-UY-A78K 4 Out-of-Frame Intra-chr q11.21 Tumor suppressor gene q11.21 Seq+ 246 ChimerSeq FusionScan TCGA_RNA-Seq DGCR8-COMT DGCR8 chr22 20067906 + COMT chr22 19950049 + Exonic hg19 BLCA TCGA-UY-A78K 2 5'UTR-5'UTR Intra-chr q11.21 q11.21 Seq+ 247 ChimerSeq FusionScan TCGA_RNA-Seq MKRN2-PPARG MKRN2 chr3 12598675 + PPARG chr3 12353878 + Exonic hg19 BLCA TCGA-UY-A78K 2 CDS-5'UTR Intra-chr p25.2 p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 248 ChimerSeq FusionScan TCGA_RNA-Seq CDK12-TAF15 CDK12 chr17 37682569 + TAF15 chr17 34169370 + Exonic hg19 BLCA TCGA-UY-A9PD 2 In-Frame Intra-chr q12 Oncogene q12 Seq+ 249 ChimerSeq FusionScan TCGA_RNA-Seq SMAD3-AAGAB SMAD3 chr15 67430438 + AAGAB chr15 67529158 - Exonic hg19 BLCA TCGA-GU-A42Q 4 Out-of-Frame Intra-chr q22.33 Transcription factor q23 Seq+ 250 ChimerSeq FusionScan TCGA_RNA-Seq PHRF1-EPS8L2 PHRF1 chr11 582081 + EPS8L2 chr11 720061 + Exonic hg19 BLCA TCGA-GU-A42Q 4 Out-of-Frame Intra-chr p15.5 p15.5 Seq+ 251 ChimerSeq FusionScan TCGA_RNA-Seq TECR-ICAM3 TECR chr19 14640523 + ICAM3 chr19 10449624 - Exonic hg19 BLCA TCGA-GU-A42Q 3 Out-of-Frame Intra-chr p13.12 p13.2 Seq+ 252 ChimerSeq FusionScan TCGA_RNA-Seq SEC11A-DDX39B SEC11A chr15 85259255 - DDX39B chr6 31500688 - Exonic hg19 BLCA TCGA-DK-A1AF 2 CDS-5'UTR Inter-chr q25.3 Seq+ 253 ChimerSeq FusionScan TCGA_RNA-Seq YWHAZ-EIF3A YWHAZ chr8 101937143 - EIF3A chr10 120796821 - Exonic hg19 BLCA TCGA-FD-A5BY 2 Out-of-Frame Inter-chr q22.3 q26.11 254 ChimerSeq FusionScan TCGA_RNA-Seq PPP5C-PDXK PPP5C chr19 46879831 + PDXK chr21 45153949 + Exonic hg19 BLCA TCGA-FD-A5BY 2 In-Frame Inter-chr q13.32 q22.3 255 ChimerSeq FusionScan TCGA_RNA-Seq HS2ST1-FAM156A HS2ST1 chr1 87380843 + FAM156A chrX 52985544 - Exonic hg19 BLCA TCGA-K4-A3WU 2 CDS-5'UTR Inter-chr p22.3 p11.22 256 ChimerSeq FusionScan TCGA_RNA-Seq HPGD-GUCY1A3 HPGD chr4 175443094 - GUCY1A3 chr4 156629387 + Exonic hg19 BLCA TCGA-K4-A3WU 2 Out-of-Frame Intra-chr q34.1 Tumor suppressor gene q32.1 Seq+ 257 ChimerSeq FusionScan TCGA_RNA-Seq SCCPDH-TMEM9 SCCPDH chr1 246887914 + TMEM9 chr1 201115976 - Exonic hg19 BLCA TCGA-K4-A3WU 2 Out-of-Frame Intra-chr q44 q32.1 258 ChimerSeq FusionScan TCGA_RNA-Seq BMP1-RACGAP1 BMP1 chr8 22059441 + RACGAP1 chr12 50384126 - Exonic hg19 BLCA TCGA-DK-A3WX 2 Out-of-Frame Inter-chr p21.3 q13.12 259 ChimerSeq FusionScan TCGA_RNA-Seq PFDN2-DEDD PFDN2 chr1 161087741 - DEDD chr1 161094316 - Exonic hg19 BLCA TCGA-FD-A5BZ 6 CDS-5'UTR Intra-chr q23.3 q23.3 Seq+ 260 ChimerSeq FusionScan TCGA_RNA-Seq REV1-LYG2 REV1 chr2 100078957 - LYG2 chr2 99863283 - Exonic hg19 BLCA TCGA-FD-A5BZ 2 In-Frame Intra-chr q11.2 q11.2 Seq+ 261 ChimerSeq FusionScan TCGA_RNA-Seq ZNF175-CTU1 ZNF175 chr19 52085135 + CTU1 chr19 51602396 - Exonic hg19 BLCA TCGA-CF-A8HY 2 In-Frame Intra-chr q13.41 Transcription factor q13.41 262 ChimerSeq FusionScan TCGA_RNA-Seq COBLL1-SCN3A COBLL1 chr2 165697665 - SCN3A chr2 166027058 - Exonic hg19 BLCA TCGA-FD-A6TA 3 Out-of-Frame Intra-chr q24.3 q24.3 Seq+ 263 ChimerSeq FusionScan TCGA_RNA-Seq COBLL1-SCN3A COBLL1 chr2 165697665 - SCN3A chr2 166021030 - Exonic hg19 BLCA TCGA-FD-A6TA 2 In-Frame Intra-chr q24.3 q24.3 Seq+ 264 ChimerSeq FusionScan TCGA_RNA-Seq EPN2-KCNJ12 EPN2 chr17 19140844 + KCNJ12 chr17 21311830 + Exonic hg19 BLCA TCGA-BT-A20Q 3 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 265 ChimerSeq FusionScan TCGA_RNA-Seq CELF1-SPI1 CELF1 chr11 47574543 - SPI1 chr11 47381591 - Exonic hg19 BLCA TCGA-BT-A20Q 3 5'UTR-CDS Intra-chr p11.2 p11.2 Tumor suppressor gene Transcription factor Seq+ 266 ChimerSeq FusionScan TCGA_RNA-Seq KDM6A-KAL1 KDM6A chrX 44945224 + KAL1 chrX 8591711 - Exonic hg19 BLCA TCGA-BT-A20Q 2 Out-of-Frame Intra-chr p11.3 Oncogene Tumor suppressor gene Seq+ 267 ChimerSeq FusionScan TCGA_RNA-Seq IKBKB-UNC5D IKBKB chr8 42129723 + UNC5D chr8 35406809 + Exonic hg19 BLCA TCGA-FD-A3SR 3 Out-of-Frame Intra-chr p11.21 Oncogene p12 Tumor suppressor gene Seq+ 268 ChimerSeq FusionScan TCGA_RNA-Seq RAPGEF2-OCIAD2 RAPGEF2 chr4 160235920 + OCIAD2 chr4 48906628 - Exonic hg19 BLCA TCGA-FD-A3SR 2 CDS-5'UTR Intra-chr q32.1 p11 Seq+ 269 ChimerSeq FusionScan TCGA_RNA-Seq PTPN14-NSL1 PTPN14 chr1 214625147 - NSL1 chr1 212912943 - Exonic hg19 BLCA TCGA-C4-A0F7 4 In-Frame Intra-chr q41 q32.3 Seq+ 270 ChimerSeq FusionScan TCGA_RNA-Seq RFX7-LIPC RFX7 chr15 56535322 - LIPC chr15 58830531 + Exonic hg19 BLCA TCGA-C4-A0F7 2 Out-of-Frame Intra-chr q21.3 Transcription factor q21.3 Seq+ 271 ChimerSeq FusionScan TCGA_RNA-Seq CEP128-TSHR CEP128 chr14 81227780 - TSHR chr14 81562982 + Exonic hg19 BLCA TCGA-C4-A0F7 2 Out-of-Frame Intra-chr q31.1 q31.1 Oncogene Seq+ 272 ChimerSeq FusionScan TCGA_RNA-Seq HDDC2-TPD52L1 HDDC2 chr6 125621683 - TPD52L1 chr6 125583979 + Exonic hg19 BLCA TCGA-DK-A1A7 2 In-Frame Intra-chr q22.31 q22.31 Seq+ 273 ChimerSeq FusionScan TCGA_RNA-Seq RPL5-CCDC18 RPL5 chr1 93300470 + CCDC18 chr1 93657556 + Exonic hg19 BLCA TCGA-FD-A3SP 3 In-Frame Intra-chr p22.1 Tumor suppressor gene p22.1 Seq+ 274 ChimerSeq FusionScan TCGA_RNA-Seq NXN-VPS53 NXN chr17 722678 - VPS53 chr17 465985 - Exonic hg19 BLCA TCGA-FD-A3SP 2 Out-of-Frame Intra-chr p13.3 Tumor suppressor gene Seq+ 275 ChimerSeq FusionScan TCGA_RNA-Seq NCOA2-ZNF277 NCOA2 chr8 71126137 - ZNF277 chr7 111967771 + Exonic hg19 BLCA TCGA-FD-A3SP 2 Out-of-Frame Inter-chr q13.3 Oncogene Transcription factor q31.1 Transcription factor 276 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD11-GALNS ANKRD11 chr16 89556652 - GALNS chr16 88908379 - Exonic hg19 BLCA TCGA-FD-A3SP 2 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 277 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF10-NUDCD1 ARHGEF10 chr8 1893821 + NUDCD1 chr8 110257710 - Exonic hg19 BLCA TCGA-FD-A3SP 2 Out-of-Frame Intra-chr q23.1 278 ChimerSeq FusionScan TCGA_RNA-Seq RALGAPA2-C20orf194 RALGAPA2 chr20 20634173 - C20orf194 chr20 3251208 - Exonic hg19 BLCA TCGA-XF-A8HG 5 In-Frame Intra-chr p11.23 p13 Seq+ 279 ChimerSeq FusionScan TCGA_RNA-Seq RALGAPA2-C20orf194 RALGAPA2 chr20 20634173 - C20orf194 chr20 3245170 - Exonic hg19 BLCA TCGA-XF-A8HG 2 Out-of-Frame Intra-chr p11.23 p13 Seq+ 280 ChimerSeq FusionScan TCGA_RNA-Seq PCGF3-SPATA24 PCGF3 chr4 699759 + SPATA24 chr5 138738382 - Exonic hg19 BLCA TCGA-XF-A8HG 2 5'UTR-CDS Inter-chr p16.3 q31.2 Seq+ 281 ChimerSeq FusionScan TCGA_RNA-Seq SERINC2-PFDN2 SERINC2 chr1 31886151 + PFDN2 chr1 161072165 - Exonic hg19 BLCA TCGA-DK-A6B2 4 In-Frame Intra-chr p35.2 q23.3 Seq+ 282 ChimerSeq FusionScan TCGA_RNA-Seq PCGF3-MYL5 PCGF3 chr4 738476 + MYL5 chr4 674297 + Exonic hg19 BLCA TCGA-DK-A6B2 4 Out-of-Frame Intra-chr p16.3 p16.3 Seq+ 283 ChimerSeq FusionScan TCGA_RNA-Seq EPS15L1-BCAR4 EPS15L1 chr19 16582723 - BCAR4 chr16 11914154 - Exonic hg19 BLCA TCGA-DK-A6B2 3 3'UTR-3'UTR Inter-chr p13.11 p13.13 Seq+ 284 ChimerSeq FusionScan TCGA_RNA-Seq GMEB1-TRNAU1AP GMEB1 chr1 29019557 + TRNAU1AP chr1 28887144 + Exonic hg19 BLCA TCGA-DK-A6B2 2 In-Frame Intra-chr p35.3 Transcription factor p35.3 Seq+ 285 ChimerSeq FusionScan TCGA_RNA-Seq RASA4-TNFRSF1A RASA4 chr7 102236080 - TNFRSF1A chr12 6439232 - Exonic hg19 BLCA TCGA-DK-A3IU 2 Out-of-Frame Inter-chr q22.1 p13.31 286 ChimerSeq FusionScan TCGA_RNA-Seq AKAP8-OSGEPL1 AKAP8 chr19 15472539 - OSGEPL1 chr2 190618790 - Exonic hg19 BLCA TCGA-DK-A3IU 2 In-Frame Inter-chr p13.12 Transcription factor q32.2 287 ChimerSeq FusionScan TCGA_RNA-Seq ADRBK1-RPLP0 ADRBK1 chr11 67051844 + RPLP0 chr12 120635265 - Exonic hg19 BLCA TCGA-DK-A3IU 2 Out-of-Frame Inter-chr q24.23 288 ChimerSeq FusionScan TCGA_RNA-Seq ZNF326-CCDC18 ZNF326 chr1 90460832 + CCDC18 chr1 93691889 + Exonic hg19 BLCA TCGA-2F-A9KR 2 Out-of-Frame Intra-chr p22.2 Transcription factor p22.1 Seq+ 289 ChimerSeq FusionScan TCGA_RNA-Seq LIMK2-CDC45 LIMK2 chr22 31664186 + CDC45 chr22 19504049 + Exonic hg19 BLCA TCGA-DK-A3IN 6 In-Frame Intra-chr q12.2 TKL:LISK q11.21 Seq+ 290 ChimerSeq FusionScan TCGA_RNA-Seq EXOC2-OOEP EXOC2 chr6 693018 - OOEP chr6 74079108 - Exonic hg19 BLCA TCGA-SY-A9G5 3 5'UTR-CDS Intra-chr p25.3 q13 Seq+ 291 ChimerSeq FusionScan TCGA_RNA-Seq NOTCH2-SEC22B NOTCH2 chr1 120572528 - SEC22B chr1 145109523 + Exonic hg19 BLCA TCGA-SY-A9G5 2 In-Frame Intra-chr p12 Oncogene Tumor suppressor gene p12 Seq+ 292 ChimerSeq FusionScan TCGA_RNA-Seq TFRC-TCTEX1D2 TFRC chr3 195808913 - TCTEX1D2 chr3 196033883 - Exonic hg19 BLCA TCGA-SY-A9G5 2 5'UTR-CDS Intra-chr q29 q29 Seq+ 293 ChimerSeq FusionScan TCGA_RNA-Seq ZFAND6-KLC1 ZFAND6 chr15 80352151 + KLC1 chr14 104153417 + Exonic hg19 BLCA TCGA-DK-A2HX 2 5'UTR-CDS Inter-chr q25.1 q32.33 294 ChimerSeq FusionScan TCGA_RNA-Seq SNX27-THEM4 SNX27 chr1 151584988 + THEM4 chr1 151849601 - Exonic hg19 BLCA TCGA-ZF-AA4R 3 In-Frame Intra-chr q21.3 q21.3 Seq+ 295 ChimerSeq FusionScan TCGA_RNA-Seq UBL3-CKAP2 UBL3 chr13 30423648 - CKAP2 chr13 53030657 + Exonic hg19 BLCA TCGA-BL-A3JM 5 Out-of-Frame Intra-chr q12.3 q14.3 Seq+ 296 ChimerSeq FusionScan TCGA_RNA-Seq RQCD1-USP37 RQCD1 chr2 219433701 + USP37 chr2 219427536 - Exonic hg19 BLCA TCGA-BL-A3JM 2 CDS-5'UTR Intra-chr q35 297 ChimerSeq FusionScan TCGA_RNA-Seq CDH3-CHKA CDH3 chr16 68718727 + CHKA chr11 67836404 - Exonic hg19 BLCA TCGA-DK-A6AV 9 In-Frame Inter-chr q22.1 q13.2 Seq+ 298 ChimerSeq FusionScan TCGA_RNA-Seq TXNRD1-CHST11 TXNRD1 chr12 104682818 + CHST11 chr12 104995683 + Exonic hg19 BLCA TCGA-DK-A6AV 4 Out-of-Frame Intra-chr q23.3 q23.3 Seq+ 299 ChimerSeq FusionScan TCGA_RNA-Seq RAB3IP-NUP107 RAB3IP chr12 70150443 + NUP107 chr12 69125386 + Exonic hg19 BLCA TCGA-BT-A0S7 8 Out-of-Frame Intra-chr q15 q15 Seq+ 300 ChimerSeq FusionScan TCGA_RNA-Seq EP300-MCHR1 EP300 chr22 41489102 + MCHR1 chr22 41076952 + Exonic hg19 BLCA TCGA-BT-A0S7 2 In-Frame Intra-chr q13.2 Oncogene q13.2 Seq+ 301 ChimerSeq FusionScan TCGA_RNA-Seq ARIH2-RHOA ARIH2 chr3 48960244 + RHOA chr3 49413024 - Exonic hg19 BLCA TCGA-FD-A3B8 6 5'UTR-5'UTR Intra-chr p21.31 p21.31 Oncogene Tumor suppressor gene Seq+ 302 ChimerSeq FusionScan TCGA_RNA-Seq ELP4-CSTF3 ELP4 chr11 31671769 + CSTF3 chr11 33129964 - Exonic hg19 BLCA TCGA-FD-A3B8 2 In-Frame Intra-chr p13 p13 303 ChimerSeq FusionScan TCGA_RNA-Seq TMEM126B-PICALM TMEM126B chr11 85346822 + PICALM chr11 85742653 - Exonic hg19 BLCA TCGA-FD-A3B8 2 Out-of-Frame Intra-chr q14.1 q14.2 304 ChimerSeq FusionScan TCGA_RNA-Seq TRPC4AP-MYH7B TRPC4AP chr20 33595352 - MYH7B chr20 33581136 + Exonic hg19 BLCA TCGA-DK-A3IV 7 In-Frame Intra-chr q11.22 q11.22 Seq+ 305 ChimerSeq FusionScan TCGA_RNA-Seq TPX2-REM1 TPX2 chr20 30345385 + REM1 chr20 30070089 + Exonic hg19 BLCA TCGA-DK-A3IV 2 Out-of-Frame Intra-chr q11.21 q11.21 Seq+ 306 ChimerSeq FusionScan TCGA_RNA-Seq TRPC4AP-ASIP TRPC4AP chr20 33622925 - ASIP chr20 32848170 + Exonic hg19 BLCA TCGA-DK-A3IV 2 CDS-5'UTR Intra-chr q11.22 q11.22 Seq+ 307 ChimerSeq FusionScan TCGA_RNA-Seq PTMS-NOC4L PTMS chr12 6875916 + NOC4L chr12 132635525 + Exonic hg19 BLCA TCGA-G2-A3VY 2 Out-of-Frame Intra-chr p13.31 q24.33 308 ChimerSeq FusionScan TCGA_RNA-Seq LIMCH1-PSMB1 LIMCH1 chr4 41362953 + PSMB1 chr6 170858201 - Exonic hg19 BLCA TCGA-G2-A3VY 2 Out-of-Frame Inter-chr p13 309 ChimerSeq FusionScan TCGA_RNA-Seq CAPN13-PGBD2 CAPN13 chr2 30953595 - PGBD2 chr1 249211477 + Exonic hg19 BLCA TCGA-G2-A3VY 2 3'UTR-5'UTR Inter-chr p23.1 q44 310 ChimerSeq FusionScan TCGA_RNA-Seq MPRIP-BAZ2A MPRIP chr17 17083402 + BAZ2A chr12 56999111 - Exonic hg19 BLCA TCGA-G2-A3VY 2 In-Frame Inter-chr p11.2 q13.3 Transcription factor 311 ChimerSeq FusionScan TCGA_RNA-Seq UCK2-DARS2 UCK2 chr1 165797169 + DARS2 chr1 173795824 + Exonic hg19 BLCA TCGA-G2-A3VY 2 Out-of-Frame Intra-chr q24.1 q25.1 Seq+ 312 ChimerSeq FusionScan TCGA_RNA-Seq ARID4B-NTPCR ARID4B chr1 235409734 - NTPCR chr1 233113908 + Exonic hg19 BLCA TCGA-G2-A3VY 2 Out-of-Frame Intra-chr q42.3 q42.2 Seq+ 313 ChimerSeq FusionScan TCGA_RNA-Seq SOCS7-MAPT SOCS7 chr17 36508915 + MAPT chr17 44101321 + Exonic hg19 BLCA TCGA-HQ-A2OF 9 Out-of-Frame Intra-chr q12 Seq+ 314 ChimerSeq FusionScan TCGA_RNA-Seq TADA2A-PLXDC1 TADA2A chr17 35767040 + PLXDC1 chr17 37239793 - Exonic hg19 BLCA TCGA-HQ-A2OF 6 5'UTR-CDS Intra-chr q12 q12 Seq+ 315 ChimerSeq FusionScan TCGA_RNA-Seq VAC14-WWOX VAC14 chr16 70765397 - WWOX chr16 79245504 + Exonic hg19 BLCA TCGA-BT-A20V 4 Out-of-Frame Intra-chr q22.2 q23.1 Tumor suppressor gene Seq+ 316 ChimerSeq FusionScan TCGA_RNA-Seq ITCH-AHCY ITCH chr20 32981687 + AHCY chr20 32883391 - Exonic hg19 BLCA TCGA-BT-A20V 2 In-Frame Intra-chr q11.22 q11.22 Seq+ 317 ChimerSeq FusionScan TCGA_RNA-Seq C7orf73-ZFAND2A C7orf73 chr7 135347342 + ZFAND2A chr7 1197893 - Exonic hg19 BLCA TCGA-CF-A5UA 2 CDS-5'UTR Intra-chr q33 p22.3 318 ChimerSeq FusionScan TCGA_RNA-Seq OLA1-RBM33 OLA1 chr2 175087760 - RBM33 chr7 155530223 + Exonic hg19 BLCA TCGA-BT-A3PK 2 Out-of-Frame Inter-chr q31.1 q36.3 319 ChimerSeq FusionScan TCGA_RNA-Seq EXT1-WDYHV1 EXT1 chr8 119122323 - WDYHV1 chr8 124440163 + Exonic hg19 BLCA TCGA-G2-A2EO 2 In-Frame Intra-chr q24.11 Oncogene Tumor suppressor gene q24.13 Seq+ 320 ChimerSeq FusionScan TCGA_RNA-Seq METTL16-VPS53 METTL16 chr17 2415052 - VPS53 chr17 463813 - Exonic hg19 BLCA TCGA-DK-A1A6 3 5'UTR-CDS Intra-chr p13.3 Tumor suppressor gene Seq+ 321 ChimerSeq FusionScan TCGA_RNA-Seq STK3-MRPL48 STK3 chr8 99837742 - MRPL48 chr11 73516071 + Exonic hg19 BLCA TCGA-DK-A1A6 3 Out-of-Frame Inter-chr q22.2 q13.4 Seq+ 322 ChimerSeq FusionScan TCGA_RNA-Seq LINC00482-SERINC2 LINC00482 chr17 79282984 - SERINC2 chr1 31905813 + Exonic hg19 BLCA TCGA-DK-A1A6 2 3'UTR-CDS Inter-chr q25.3 p35.2 Seq+ 323 ChimerSeq FusionScan TCGA_RNA-Seq FOXK2-TBCD FOXK2 chr17 80529746 + TBCD chr17 80755632 + Exonic hg19 BLCA TCGA-DK-A1A6 2 In-Frame Intra-chr q25.3 Transcription factor Seq+ 324 ChimerSeq FusionScan TCGA_RNA-Seq LGR5-CNOT2 LGR5 chr12 71928966 + CNOT2 chr12 70747608 + Exonic hg19 BLCA TCGA-ZF-AA4U 2 Out-of-Frame Intra-chr q21.1 q15 Seq+ 325 ChimerSeq FusionScan TCGA_RNA-Seq SYS1-IDO2 SYS1 chr20 43994326 + IDO2 chr8 39872765 + Exonic hg19 BLCA TCGA-2F-A9KP 8 Out-of-Frame Inter-chr q13.12 p11.21 Seq+ 326 ChimerSeq FusionScan TCGA_RNA-Seq SARNP-PAN2 SARNP chr12 56211449 - PAN2 chr12 56722425 - Exonic hg19 BLCA TCGA-2F-A9KP 5 In-Frame Intra-chr q13.2 q13.3 Seq+ 327 ChimerSeq FusionScan TCGA_RNA-Seq IP6K1-MON1A IP6K1 chr3 49775644 - MON1A chr3 49950792 - Exonic hg19 BLCA TCGA-2F-A9KP 3 In-Frame Intra-chr p21.31 p21.31 Seq+ 328 ChimerSeq FusionScan TCGA_RNA-Seq EPB41-HGSNAT EPB41 chr1 29323831 + HGSNAT chr8 43013717 + Exonic hg19 BLCA TCGA-2F-A9KP 3 In-Frame Inter-chr p35.3 Tumor suppressor gene p11.21 Seq+ 329 ChimerSeq FusionScan TCGA_RNA-Seq PGAP3-ERBB2 PGAP3 chr17 37844086 - ERBB2 chr17 37844948 + Exonic hg19 BLCA TCGA-2F-A9KP 2 CDS-5'UTR Intra-chr q12 Oncogene q12 Oncogene Seq+ 330 ChimerSeq FusionScan TCGA_RNA-Seq ST3GAL3-ZMAT4 ST3GAL3 chr1 44202051 + ZMAT4 chr8 40389757 - Exonic hg19 BLCA TCGA-2F-A9KP 2 Out-of-Frame Inter-chr p34.1 p11.21 Transcription factor Seq+ 331 ChimerSeq FusionScan TCGA_RNA-Seq FAM108C1-PRAMEF6 FAM108C1 chr15 80988360 + PRAMEF6 chr1 13364868 + Exonic hg19 BLCA TCGA-2F-A9KP 2 CDS-5'UTR Inter-chr Seq+ 332 ChimerSeq FusionScan TCGA_RNA-Seq NUP188-TMEM8C NUP188 chr9 131768647 + TMEM8C chr9 136379907 - Exonic hg19 BLCA TCGA-2F-A9KP 2 In-Frame Intra-chr q34.11 q34.2 Seq+ 333 ChimerSeq FusionScan TCGA_RNA-Seq FBXO34-KTN1 FBXO34 chr14 55738255 + KTN1 chr14 56068474 + Exonic hg19 BLCA TCGA-CU-A3QU 2 5'UTR-5'UTR Intra-chr q22.3 q22.3 334 ChimerSeq FusionScan TCGA_RNA-Seq WDR37-FAM107B WDR37 chr10 1142186 + FAM107B chr10 14709690 - Exonic hg19 BLCA TCGA-CU-A3QU 2 In-Frame Intra-chr p15.3 p13 Seq+ 335 ChimerSeq FusionScan TCGA_RNA-Seq POLE-ANKS1B POLE chr12 133263839 - ANKS1B chr12 99225914 - Exonic hg19 BLCA TCGA-CF-A27C 2 Out-of-Frame Intra-chr q24.33 q23.1 Seq+ 336 ChimerSeq FusionScan TCGA_RNA-Seq DHRS2-IL25 DHRS2 chr14 24109104 + IL25 chr14 23844833 + Exonic hg19 BLCA TCGA-E7-A85H 8 Out-of-Frame Intra-chr q11.2 q11.2 Seq+ 337 ChimerSeq FusionScan TCGA_RNA-Seq DHRS2-IL25 DHRS2 chr14 24108565 + IL25 chr14 23844833 + Exonic hg19 BLCA TCGA-E7-A85H 2 Out-of-Frame Intra-chr q11.2 q11.2 Seq+ 338 ChimerSeq FusionScan TCGA_RNA-Seq PPAP2A-SLC38A9 PPAP2A chr5 54830399 - SLC38A9 chr5 54993820 - Exonic hg19 BLCA TCGA-E7-A85H 2 CDS-5'UTR Intra-chr q11.2 Seq+ 339 ChimerSeq FusionScan TCGA_RNA-Seq PPME1-YIF1A PPME1 chr11 73915490 + YIF1A chr11 66055147 - Exonic hg19 BLCA TCGA-E7-A85H 2 In-Frame Intra-chr q13.4 q13.2 Seq+ 340 ChimerSeq FusionScan TCGA_RNA-Seq PSPC1-ACTR8 PSPC1 chr13 20304378 - ACTR8 chr3 53914136 - Exonic hg19 BLCA TCGA-E7-A85H 2 In-Frame Inter-chr q12.11 p21.1 Seq+ 341 ChimerSeq FusionScan TCGA_RNA-Seq LRRC8A-FBLN1 LRRC8A chr9 131648400 + FBLN1 chr22 45970390 + Exonic hg19 BLCA TCGA-DK-A3IL 2 5'UTR-CDS Inter-chr q34.11 q13.31 Tumor suppressor gene 342 ChimerSeq FusionScan TCGA_RNA-Seq BAG4-WRN BAG4 chr8 38050313 + WRN chr8 31012139 + Exonic hg19 BLCA TCGA-FD-A62O 2 In-Frame Intra-chr p11.23 p12 Oncogene Seq+ 343 ChimerSeq FusionScan TCGA_RNA-Seq DRAM1-NUP107 DRAM1 chr12 102291708 + NUP107 chr12 69135592 + Exonic hg19 BLCA TCGA-GC-A3RD 6 Out-of-Frame Intra-chr q23.2 q15 Seq+ 344 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-DRAM1 FRS2 chr12 69925836 + DRAM1 chr12 102291640 + Exonic hg19 BLCA TCGA-GC-A3RD 5 5'UTR-CDS Intra-chr q15 q23.2 Seq+ 345 ChimerSeq FusionScan TCGA_RNA-Seq TSEN2-PPARG TSEN2 chr3 12538053 + PPARG chr3 12475396 + Exonic hg19 BLCA TCGA-GC-A3RD 3 Out-of-Frame Intra-chr p25.2 p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 346 ChimerSeq FusionScan TCGA_RNA-Seq IRAK1-MECP2 IRAK1 chrX 153283456 - MECP2 chrX 153298008 - Exonic hg19 BLCA TCGA-GC-A3RD 2 Out-of-Frame Intra-chr q28 TKL:IRAK q28 Transcription factor Seq+ 347 ChimerSeq FusionScan TCGA_RNA-Seq HDAC1-PEPD HDAC1 chr1 32793278 + PEPD chr19 33904549 - Exonic hg19 BLCA TCGA-GC-A3RD 2 Out-of-Frame Inter-chr p35.2 Tumor suppressor gene q13.11 Seq+ 348 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-NUP107 FRS2 chr12 69925836 + NUP107 chr12 69135592 + Exonic hg19 BLCA TCGA-GC-A3RD 2 5'UTR-CDS Intra-chr q15 q15 Seq+ 349 ChimerSeq FusionScan TCGA_RNA-Seq GTF2F2-S100A4 GTF2F2 chr13 45694856 + S100A4 chr1 153517285 - Exonic hg19 BLCA TCGA-DK-A1AD 11 CDS-5'UTR Inter-chr q14.12 q21.3 Seq+ 350 ChimerSeq FusionScan TCGA_RNA-Seq EEA1-CRADD EEA1 chr12 93285404 - CRADD chr12 94243745 + Exonic hg19 BLCA TCGA-DK-A1AD 5 Out-of-Frame Intra-chr q22 Transcription factor q22 Seq+ 351 ChimerSeq FusionScan TCGA_RNA-Seq PTK2-UGT2A3 PTK2 chr8 142011223 - UGT2A3 chr4 69798477 - Exonic hg19 BLCA TCGA-DK-A1AD 4 5'UTR-5'UTR Inter-chr q24.3 Seq+ 352 ChimerSeq FusionScan TCGA_RNA-Seq AFF1-PTPN13 AFF1 chr4 87928576 + PTPN13 chr4 87637682 + Exonic hg19 BLCA TCGA-DK-A1AD 3 Out-of-Frame Intra-chr q21.3 Oncogene q21.3 Tumor suppressor gene Seq+ 353 ChimerSeq FusionScan TCGA_RNA-Seq HOPX-SCFD2 HOPX chr4 57547420 - SCFD2 chr4 53787037 - Exonic hg19 BLCA TCGA-DK-A1AD 3 5'UTR-CDS Intra-chr q12 Tumor suppressor gene q12 354 ChimerSeq FusionScan TCGA_RNA-Seq GTF2F2-S100A3 GTF2F2 chr13 45694856 + S100A3 chr1 153520966 - Exonic hg19 BLCA TCGA-DK-A1AD 2 CDS-5'UTR Inter-chr q14.12 q21.3 Seq+ 355 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 BLCA TCGA-DK-A1AD 2 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 356 ChimerSeq FusionScan TCGA_RNA-Seq E2F3-MYL4 E2F3 chr6 20404063 + MYL4 chr17 45286754 + Exonic hg19 BLCA TCGA-GU-A764 9 CDS-5'UTR Inter-chr p22.3 Tumor suppressor gene Transcription factor q21.32 Seq+ 357 ChimerSeq FusionScan TCGA_RNA-Seq GRID1-GLUD1 GRID1 chr10 88123697 - GLUD1 chr10 88836413 - Exonic hg19 BLCA TCGA-K4-A6MB 3 In-Frame Intra-chr q23.2 q23.2 Seq+ 358 ChimerSeq FusionScan TCGA_RNA-Seq FBXO42-SPATA21 FBXO42 chr1 16678749 - SPATA21 chr1 16731599 - Exonic hg19 BLCA TCGA-K4-A6MB 2 5'UTR-CDS Intra-chr p36.13 p36.13 Seq+ 359 ChimerSeq FusionScan TCGA_RNA-Seq EVI5-GLMN EVI5 chr1 93070863 - GLMN chr1 92737209 - Exonic hg19 BLCA TCGA-K4-A6MB 2 In-Frame Intra-chr p22.1 p22.1 Seq+ 360 ChimerSeq FusionScan TCGA_RNA-Seq TYW1B-MIOS TYW1B chr7 72178578 - MIOS chr7 7645572 + Exonic hg19 BLCA TCGA-FD-A6TE 2 Out-of-Frame Intra-chr q11.23 p21.3 361 ChimerSeq FusionScan TCGA_RNA-Seq TYW1-MIOS TYW1 chr7 66563705 + MIOS chr7 7645572 + Exonic hg19 BLCA TCGA-FD-A6TE 2 Out-of-Frame Intra-chr q11.21 p21.3 Seq+ 362 ChimerSeq FusionScan TCGA_RNA-Seq C7orf42-PRMT2 C7orf42 chr7 66386448 + PRMT2 chr21 48063446 + Exonic hg19 BLCA TCGA-KQ-A41R 2 5'UTR-CDS Inter-chr q22.3 363 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0430-IQCK KIAA0430 chr16 15724188 - IQCK chr16 19867808 + Exonic hg19 BLCA TCGA-BT-A2LB 3 Out-of-Frame Intra-chr p12.3 Seq+ 364 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R3C-COL6A3 PPP2R3C chr14 35579024 - COL6A3 chr2 238245175 - Exonic hg19 BLCA TCGA-BT-A2LB 2 In-Frame Inter-chr q13.2 q37.3 365 ChimerSeq FusionScan TCGA_RNA-Seq CREBBP-CASKIN1 CREBBP chr16 3794894 - CASKIN1 chr16 2240359 - Exonic hg19 BLCA TCGA-GU-A42R 2 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 366 ChimerSeq FusionScan TCGA_RNA-Seq TBL1Y-GPR143 TBL1Y chrY 6942661 + GPR143 chrX 9693880 - Exonic hg19 BLCA TCGA-CU-A3KJ 3 In-Frame Inter-chr p11.2 p22.2 367 ChimerSeq FusionScan TCGA_RNA-Seq INPP5A-TTC40 INPP5A chr10 134579350 + TTC40 chr10 134622408 - Exonic hg19 BLCA TCGA-CU-A3KJ 3 In-Frame Intra-chr q26.3 Seq+ 368 ChimerSeq FusionScan TCGA_RNA-Seq TBL1X-GPR143 TBL1X chrX 9665469 + GPR143 chrX 9693880 - Exonic hg19 BLCA TCGA-CU-A3KJ 3 In-Frame Intra-chr p22.31 p22.2 Seq+ 369 ChimerSeq FusionScan TCGA_RNA-Seq DEPDC1B-PDE4D DEPDC1B chr5 59938638 - PDE4D chr5 59481514 - Exonic hg19 BLCA TCGA-CU-A3KJ 2 CDS-5'UTR Intra-chr q12.1 q12.1 Seq+ 370 ChimerSeq FusionScan TCGA_RNA-Seq PPP6R2-SELO PPP6R2 chr22 50810579 + SELO chr22 50654145 + Exonic hg19 BLCA TCGA-E7-A5KE 4 5'UTR-CDS Intra-chr q13.33 Seq+ 371 ChimerSeq FusionScan TCGA_RNA-Seq PPARG-SYN2 PPARG chr3 12329519 + SYN2 chr3 12228868 + Exonic hg19 BLCA TCGA-E7-A5KE 3 5'UTR-CDS Intra-chr p25.2 Oncogene Tumor suppressor gene Transcription factor p25.2 Seq+ 372 ChimerSeq FusionScan TCGA_RNA-Seq LLGL2-EXOC7 LLGL2 chr17 73521906 + EXOC7 chr17 74083801 - Exonic hg19 BLCA TCGA-E7-A5KE 2 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 373 ChimerSeq FusionScan TCGA_RNA-Seq KBTBD2-COBL KBTBD2 chr7 32931147 - COBL chr7 51287641 - Exonic hg19 BLCA TCGA-BT-A20J 3 5'UTR-CDS Intra-chr p14.3 p12.1 Seq+ 374 ChimerSeq FusionScan TCGA_RNA-Seq ALG3-POLR2H ALG3 chr3 183966532 - POLR2H chr3 184082753 + Exonic hg19 BLCA TCGA-BT-A20J 2 In-Frame Intra-chr q27.1 q27.1 375 ChimerSeq FusionScan TCGA_RNA-Seq CTSW-FIBP CTSW chr11 65647757 + FIBP chr11 65653134 - Exonic hg19 BLCA TCGA-E7-A8O8 4 Out-of-Frame Intra-chr q13.1 q13.1 Seq+ 376 ChimerSeq FusionScan TCGA_RNA-Seq KPNA3-FGF2 KPNA3 chr13 50321084 - FGF2 chr4 123797475 + Exonic hg19 BLCA TCGA-E5-A2PC 3 Out-of-Frame Inter-chr q14.2 q28.1 Seq+ 377 ChimerSeq FusionScan TCGA_RNA-Seq KANK1-NFX1 KANK1 chr9 707247 + NFX1 chr9 33338507 + Exonic hg19 BLCA TCGA-DK-A3IQ 2 5'UTR-CDS Intra-chr p24.3 Tumor suppressor gene p13.3 Transcription factor Seq+ 378 ChimerSeq FusionScan TCGA_RNA-Seq RAB1A-NRXN1 RAB1A chr2 65325104 - NRXN1 chr2 51149825 - Exonic hg19 BLCA TCGA-XF-A8HH 5 Out-of-Frame Intra-chr p14 p16.3 379 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD46-NCALD ANKRD46 chr8 101571938 - NCALD chr8 102705124 - Exonic hg19 BLCA TCGA-XF-A8HH 3 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 380 ChimerSeq FusionScan TCGA_RNA-Seq USP48-RTN3 USP48 chr1 22109316 - RTN3 chr11 63517462 + Exonic hg19 BLCA TCGA-C4-A0F0 2 Out-of-Frame Inter-chr p36.12 q13.1 381 ChimerSeq FusionScan TCGA_RNA-Seq YWHAE-ABR YWHAE chr17 1303340 - ABR chr17 1028702 - Exonic hg19 BLCA TCGA-G2-A2EJ 2 In-Frame Intra-chr p13.3 p13.3 Seq+ 382 ChimerSeq FusionScan TCGA_RNA-Seq AVL9-BBS9 AVL9 chr7 32535414 + BBS9 chr7 33376052 + Exonic hg19 BLCA TCGA-G2-A2EJ 2 Out-of-Frame Intra-chr p14.3 p14.3 Seq+ 383 ChimerSeq FusionScan TCGA_RNA-Seq ATPAF1-OSBPL9 ATPAF1 chr1 47108865 - OSBPL9 chr1 52242504 + Exonic hg19 BLCA TCGA-CF-A1HS 3 In-Frame Intra-chr p33 p32.3 Seq+ 384 ChimerSeq FusionScan TCGA_RNA-Seq SEC14L1-MORC3 SEC14L1 chr17 75089429 + MORC3 chr21 37736390 + Exonic hg19 BLCA TCGA-G2-A3IE 2 5'UTR-CDS Inter-chr q25.2 q22.12 385 ChimerSeq FusionScan TCGA_RNA-Seq KLHDC5-MRPS35 KLHDC5 chr12 27934135 + MRPS35 chr12 27908113 + Exonic hg19 BLCA TCGA-G2-A3IE 2 Out-of-Frame Intra-chr p11.22 Seq+ 386 ChimerSeq FusionScan TCGA_RNA-Seq PFDN2-NIT1 PFDN2 chr1 161087741 - NIT1 chr1 161088923 + Exonic hg19 BLCA TCGA-UY-A9PH 2 Out-of-Frame Intra-chr q23.3 q23.3 Seq+ 387 ChimerSeq FusionScan TCGA_RNA-Seq PFDN2-NIT1 PFDN2 chr1 161087741 - NIT1 chr1 161088575 + Exonic hg19 BLCA TCGA-UY-A9PH 2 Out-of-Frame Intra-chr q23.3 q23.3 Seq+ 388 ChimerSeq FusionScan TCGA_RNA-Seq SMARCA5-LRBA SMARCA5 chr4 144469293 + LRBA chr4 151358016 - Exonic hg19 BLCA TCGA-FD-A3B7 2 In-Frame Intra-chr q31.21 q31.3 Seq+ 389 ChimerSeq FusionScan TCGA_RNA-Seq PFKP-PRPSAP1 PFKP chr10 3159038 + PRPSAP1 chr17 74309097 - Exonic hg19 BLCA TCGA-FD-A3B7 2 Out-of-Frame Inter-chr p15.2 q25.1 390 ChimerSeq FusionScan TCGA_RNA-Seq HPS1-PYROXD2 HPS1 chr10 100206563 - PYROXD2 chr10 100148265 - Exonic hg19 BLCA TCGA-DK-A1AE 9 5'UTR-CDS Intra-chr q24.2 q24.2 Seq+ 391 ChimerSeq FusionScan TCGA_RNA-Seq HPS1-PYROXD2 HPS1 chr10 100206563 - PYROXD2 chr10 100147064 - Exonic hg19 BLCA TCGA-DK-A1AE 2 5'UTR-CDS Intra-chr q24.2 q24.2 Seq+ 392 ChimerSeq FusionScan TCGA_RNA-Seq UQCRC2-WHSC1L1 UQCRC2 chr16 21964777 + WHSC1L1 chr8 38205733 - Exonic hg19 BLCA TCGA-E7-A8O7 2 CDS-5'UTR Inter-chr p11.23 Tumor suppressor gene 393 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF2-S100A7A ARHGEF2 chr1 155948155 - S100A7A chr1 153390541 + Exonic hg19 BLCA TCGA-K4-A5RH 12 CDS-5'UTR Intra-chr q22 q21.3 Seq+ 394 ChimerSeq FusionScan TCGA_RNA-Seq CHTOP-S100A13 CHTOP chr1 153609129 + S100A13 chr1 153604716 - Exonic hg19 BLCA TCGA-K4-A5RH 5 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 395 ChimerSeq FusionScan TCGA_RNA-Seq MPRIP-TOM1L2 MPRIP chr17 16946285 + TOM1L2 chr17 17766162 - Exonic hg19 BLCA TCGA-K4-A5RH 3 Out-of-Frame Intra-chr p11.2 p11.2 Tumor suppressor gene Seq+ 396 ChimerSeq FusionScan TCGA_RNA-Seq SREBF1-MED9 SREBF1 chr17 17740040 - MED9 chr17 17394592 + Exonic hg19 BLCA TCGA-K4-A5RH 2 Out-of-Frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 397 ChimerSeq FusionScan TCGA_RNA-Seq VAPA-PSPC1 VAPA chr18 9937063 + PSPC1 chr13 20283739 - Exonic hg19 BLCA TCGA-K4-A5RH 2 In-Frame Inter-chr p11.22 q12.11 398 ChimerSeq FusionScan TCGA_RNA-Seq GTF2IRD2B-PRRC2C GTF2IRD2B chr7 74558472 + PRRC2C chr1 171557517 + Exonic hg19 BLCA TCGA-DK-A1A5 2 In-Frame Inter-chr q11.23 Transcription factor q24.3 399 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-RERG RCC1 chr1 28834672 + RERG chr12 15274053 - Exonic hg19 BLCA TCGA-DK-A1AB 2 5'UTR-CDS Inter-chr p35.3 p12.3 400 ChimerSeq FusionScan TCGA_RNA-Seq IQSEC1-WNT7A IQSEC1 chr3 12961929 - WNT7A chr3 13916670 - Exonic hg19 BLCA TCGA-GV-A3JV 3 Out-of-Frame Intra-chr p25.2 p25.1 Tumor suppressor gene Seq+ 401 ChimerSeq FusionScan TCGA_RNA-Seq WNT7A-PPFIA1 WNT7A chr3 13896028 - PPFIA1 chr11 70221023 + Exonic hg19 BLCA TCGA-GV-A3JV 3 Out-of-Frame Inter-chr p25.1 Tumor suppressor gene q13.3 Seq+ 402 ChimerSeq FusionScan TCGA_RNA-Seq IQSEC1-WNT7A IQSEC1 chr3 12954927 - WNT7A chr3 13916670 - Exonic hg19 BLCA TCGA-GV-A3JV 2 Out-of-Frame Intra-chr p25.2 p25.1 Tumor suppressor gene Seq+ 403 ChimerSeq FusionScan TCGA_RNA-Seq UCKL1-TAF1C UCKL1 chr20 62587612 - TAF1C chr16 84216046 - Exonic hg19 BLCA TCGA-GV-A3JV 2 In-Frame Inter-chr q13.33 q24.1 404 ChimerSeq FusionScan TCGA_RNA-Seq IQSEC1-WNT7A IQSEC1 chr3 12963619 - WNT7A chr3 13916670 - Exonic hg19 BLCA TCGA-GV-A3JV 2 In-Frame Intra-chr p25.2 p25.1 Tumor suppressor gene Seq+ 405 ChimerSeq FusionScan TCGA_RNA-Seq SBF1-FBLN1 SBF1 chr22 50892940 - FBLN1 chr22 45938034 + Exonic hg19 BLCA TCGA-K4-A83P 2 Out-of-Frame Intra-chr q13.33 q13.31 Tumor suppressor gene Seq+ 406 ChimerSeq FusionScan TCGA_RNA-Seq FUS-EXT2 FUS chr16 31196500 + EXT2 chr11 44129232 + Exonic hg19 BLCA TCGA-DK-A3WY 2 Out-of-Frame Inter-chr p11.2 Tumor suppressor gene p11.2 Oncogene Tumor suppressor gene 407 ChimerSeq FusionScan TCGA_RNA-Seq UBA52-ZNF85 UBA52 chr19 18682719 + ZNF85 chr19 21131549 + Exonic hg19 BLCA TCGA-FD-A6TG 2 5'UTR-CDS Intra-chr p13.11 Transcription factor 408 ChimerSeq FusionScan TCGA_RNA-Seq UBA52-ZNF92 UBA52 chr19 18682719 + ZNF92 chr7 64863253 + Exonic hg19 BLCA TCGA-FD-A6TG 2 5'UTR-CDS Inter-chr p13.11 q11.21 Transcription factor 409 ChimerSeq FusionScan TCGA_RNA-Seq DLG1-MYO9B DLG1 chr3 196921295 - MYO9B chr19 17301905 + Exonic hg19 BLCA TCGA-FD-A6TG 2 In-Frame Inter-chr q29 Tumor suppressor gene p13.11 Seq+ 410 ChimerSeq FusionScan TCGA_RNA-Seq TLK2-IRAK3 TLK2 chr17 60679541 + IRAK3 chr12 66620502 + Exonic hg19 BLCA TCGA-FD-A6TG 2 In-Frame Inter-chr q23.2 Other:TLK q14.3 TKL:IRAK Seq+ 411 ChimerSeq FusionScan TCGA_RNA-Seq RARG-KRT8 RARG chr12 53624952 - KRT8 chr12 53298811 - Exonic hg19 BLCA TCGA-K4-A4AC 3 5'UTR-5'UTR Intra-chr q13.13 Transcription factor q13.13 Seq+ 412 ChimerSeq FusionScan TCGA_RNA-Seq CMAS-GAS5 CMAS chr12 22215368 + GAS5 chr1 173833442 - Exonic hg19 BLCA TCGA-G2-A3IB 3 CDS-3'UTR Inter-chr p12.1 q25.1 Tumor suppressor gene Seq+ 413 ChimerSeq FusionScan TCGA_RNA-Seq HMBOX1-INTS9 HMBOX1 chr8 28748195 + INTS9 chr8 28717080 - Exonic hg19 BLCA TCGA-G2-A3IB 2 5'UTR-5'UTR Intra-chr p21.1 Transcription factor p21.1 414 ChimerSeq FusionScan TCGA_RNA-Seq ARIH1-EIF2S2 ARIH1 chr15 72767355 + EIF2S2 chr20 32693351 - Exonic hg19 BLCA TCGA-GV-A40E 2 In-Frame Inter-chr q24.1 q11.22 415 ChimerSeq FusionScan TCGA_RNA-Seq MYH9-TRIOBP MYH9 chr22 36701975 - TRIOBP chr22 38147778 + Exonic hg19 BLCA TCGA-GV-A40E 2 Out-of-Frame Intra-chr q12.3 Oncogene Tumor suppressor gene q13.1 Seq+ 416 ChimerSeq FusionScan TCGA_RNA-Seq MGAT5B-CYP11A1 MGAT5B chr17 74878380 + CYP11A1 chr15 74640396 - Exonic hg19 BLCA TCGA-GV-A40E 2 In-Frame Inter-chr q25.2 q24.1 Seq+ 417 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57759200 + VMP1 chr17 57915655 + Exonic hg19 BLCA TCGA-UY-A8OC 2 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 418 ChimerSeq FusionScan TCGA_RNA-Seq SEC13-GOLPH3L SEC13 chr3 10362733 - GOLPH3L chr1 150634404 - Exonic hg19 BLCA TCGA-ZF-AA4T 4 In-Frame Inter-chr p25.3 q21.3 Seq+ 419 ChimerSeq FusionScan TCGA_RNA-Seq SRCIN1-PSMB3 SRCIN1 chr17 36761936 - PSMB3 chr17 36918663 + Exonic hg19 BLCA TCGA-ZF-AA4T 2 Out-of-Frame Intra-chr q12 Seq+ 420 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BLCA TCGA-K4-A3WV 3 Out-of-Frame Intra-chr q22.2 q22.2 421 ChimerSeq FusionScan TCGA_RNA-Seq JARID2-PPP1R10 JARID2 chr6 15374483 + PPP1R10 chr6 30584775 - Exonic hg19 BLCA TCGA-K4-A3WV 2 CDS-5'UTR Intra-chr p22.3 Seq+ 422 ChimerSeq FusionScan TCGA_RNA-Seq GMDS-MRPS18B GMDS chr6 1726649 - MRPS18B chr6 30590608 + Exonic hg19 BLCA TCGA-K4-A3WV 2 CDS-3'UTR Intra-chr p25.3 Seq+ 423 ChimerSeq FusionScan TCGA_RNA-Seq STRBP-DENND1A STRBP chr9 126030714 - DENND1A chr9 126165769 - Exonic hg19 BLCA TCGA-K4-A3WV 2 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 424 ChimerSeq FusionScan TCGA_RNA-Seq WIPF2-MSL1 WIPF2 chr17 38375744 + MSL1 chr17 38282435 + Exonic hg19 BLCA TCGA-K4-A3WV 2 5'UTR-5'UTR Intra-chr q21.2 q21.1 Seq+ 425 ChimerSeq FusionScan TCGA_RNA-Seq SERPINB6-ANXA2 SERPINB6 chr6 2971766 - ANXA2 chr15 60678285 - Exonic hg19 BLCA TCGA-K4-A3WV 2 5'UTR-5'UTR Inter-chr p25.2 q22.2 Seq+ 426 ChimerSeq FusionScan TCGA_RNA-Seq RAB11FIP1-KCNU1 RAB11FIP1 chr8 37756588 - KCNU1 chr8 36763225 + Exonic hg19 BLCA TCGA-FT-A3EE 3 In-Frame Intra-chr p11.23 p11.23 Seq+ 427 ChimerSeq FusionScan TCGA_RNA-Seq RCOR1-TECPR2 RCOR1 chr14 103180954 + TECPR2 chr14 102963315 + Exonic hg19 BLCA TCGA-BT-A3PJ 3 In-Frame Intra-chr q32.31 q32.31 Seq+ 428 ChimerSeq FusionScan TCGA_RNA-Seq NCAM2-ESYT2 NCAM2 chr21 22849792 + ESYT2 chr7 158534587 - Exonic hg19 BLCA TCGA-BT-A3PJ 2 Out-of-Frame Inter-chr q21.1 Tumor suppressor gene q36.3 429 ChimerSeq FusionScan TCGA_RNA-Seq CLK1-RAC1 CLK1 chr2 201729286 - RAC1 chr7 6439756 + Exonic hg19 BLCA TCGA-CF-A47V 2 5'UTR-CDS Inter-chr q33.1 CMGC:CLK p22.1 Oncogene 430 ChimerSeq FusionScan TCGA_RNA-Seq SLBP-ADD1 SLBP chr4 1713600 - ADD1 chr4 2896308 + Exonic hg19 BLCA TCGA-CF-A47V 2 Out-of-Frame Intra-chr p16.3 p16.3 Seq+ 431 ChimerSeq FusionScan TCGA_RNA-Seq EHMT1-PPP1R37 EHMT1 chr9 140622981 + PPP1R37 chr19 45641771 + Exonic hg19 BLCA TCGA-H4-A2HO 3 In-Frame Inter-chr q34.3 q13.32 Seq+ 432 ChimerSeq FusionScan TCGA_RNA-Seq UVRAG-INCENP UVRAG chr11 75623083 + INCENP chr11 61895622 + Exonic hg19 BLCA TCGA-H4-A2HO 2 CDS-5'UTR Intra-chr q13.5 Tumor suppressor gene q12.3 Seq+ 433 ChimerSeq FusionScan TCGA_RNA-Seq FNDC3B-EMP3 FNDC3B chr3 171969331 + EMP3 chr19 48832608 + Exonic hg19 BLCA TCGA-FD-A5BT 3 In-Frame Inter-chr q26.31 q13.33 Seq+ 434 ChimerSeq FusionScan TCGA_RNA-Seq FNDC3B-EMP3 FNDC3B chr3 171969331 + EMP3 chr19 48830086 + Exonic hg19 BLCA TCGA-FD-A5BT 2 CDS-5'UTR Inter-chr q26.31 q13.33 Seq+ 435 ChimerSeq FusionScan TCGA_RNA-Seq UBE2L3-YPEL1 UBE2L3 chr22 21922060 + YPEL1 chr22 22065197 - Exonic hg19 BLCA TCGA-BT-A3PH 3 5'UTR-5'UTR Intra-chr q11.21 q11.22 Seq+ 436 ChimerSeq FusionScan TCGA_RNA-Seq CLIP1-CRCP CLIP1 chr12 122907067 - CRCP chr7 65610429 + Exonic hg19 BLCA TCGA-BT-A3PH 2 5'UTR-5'UTR Inter-chr q24.31 q11.21 437 ChimerSeq FusionScan TCGA_RNA-Seq WDR62-HCST WDR62 chr19 36575646 + HCST chr19 36394252 + Exonic hg19 BLCA TCGA-BT-A3PH 2 In-Frame Intra-chr q13.12 q13.12 Seq+ 438 ChimerSeq FusionScan TCGA_RNA-Seq SBNO2-SERINC2 SBNO2 chr19 1149367 - SERINC2 chr1 31905813 + Exonic hg19 BLCA TCGA-DK-A2I4 2 In-Frame Inter-chr p13.3 p35.2 Seq+ 439 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57728677 + VMP1 chr17 57915655 + Exonic hg19 BLCA TCGA-G2-A2EF 8 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 440 ChimerSeq FusionScan TCGA_RNA-Seq LAP3-DDX1 LAP3 chr4 17583437 + DDX1 chr2 15746273 + Exonic hg19 BLCA TCGA-G2-A2EF 7 In-Frame Inter-chr p15.32 p24.3 Seq+ 441 ChimerSeq FusionScan TCGA_RNA-Seq SEC24C-ADK SEC24C chr10 75504195 + ADK chr10 76429940 + Exonic hg19 BLCA TCGA-G2-A2EF 4 5'UTR-CDS Intra-chr q22.2 q22.2 Seq+ 442 ChimerSeq FusionScan TCGA_RNA-Seq CDK6-HEPACAM2 CDK6 chr7 92404009 - HEPACAM2 chr7 92821676 - Exonic hg19 BLCA TCGA-G2-A2EF 4 In-Frame Intra-chr q21.2 CMGC:CDK Oncogene Tumor suppressor gene q21.2 Seq+ 443 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D20-C20orf96 TBC1D20 chr20 442979 - C20orf96 chr20 270317 - Exonic hg19 BLCA TCGA-G2-A2EF 4 Out-of-Frame Intra-chr p13 p13 Seq+ 444 ChimerSeq FusionScan TCGA_RNA-Seq ZNF565-THAP8 ZNF565 chr19 36705523 - THAP8 chr19 36531038 - Exonic hg19 BLCA TCGA-G2-A2EF 3 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.12 Transcription factor Seq+ 445 ChimerSeq FusionScan TCGA_RNA-Seq GLG1-APPBP2 GLG1 chr16 74495991 - APPBP2 chr17 58538148 - Exonic hg19 BLCA TCGA-G2-A2EF 2 In-Frame Inter-chr q23.1 q23.2 446 ChimerSeq FusionScan TCGA_RNA-Seq NFAT5-CHST4 NFAT5 chr16 69600277 + CHST4 chr16 71570562 + Exonic hg19 BLCA TCGA-GC-A3YS 3 5'UTR-5'UTR Intra-chr q22.1 Transcription factor q22.2 Seq+ 447 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57746301 + VMP1 chr17 57915655 + Exonic hg19 BLCA TCGA-GC-A3YS 3 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 448 ChimerSeq FusionScan TCGA_RNA-Seq C7orf42-TYW1 C7orf42 chr7 66386448 + TYW1 chr7 66548416 + Exonic hg19 BLCA TCGA-GV-A3QI 4 5'UTR-CDS Intra-chr q11.21 449 ChimerSeq FusionScan TCGA_RNA-Seq COMMD1-FARS2 COMMD1 chr2 62228117 + FARS2 chr6 5771523 + Exonic hg19 BLCA TCGA-GV-A3QI 2 Out-of-Frame Inter-chr p15 p25.1 Seq+ 450 ChimerSeq FusionScan TCGA_RNA-Seq WIPF2-MED24 WIPF2 chr17 38375744 + MED24 chr17 38209910 - Exonic hg19 BLCA TCGA-GV-A3QI 2 5'UTR-5'UTR Intra-chr q21.2 q21.1 Seq+ 451 ChimerSeq FusionScan TCGA_RNA-Seq WIPF2-MED24 WIPF2 chr17 38375744 + MED24 chr17 38209888 - Exonic hg19 BLCA TCGA-GV-A3QI 2 5'UTR-5'UTR Intra-chr q21.2 q21.1 Seq+ 452 ChimerSeq FusionScan TCGA_RNA-Seq MX1-USE1 MX1 chr21 42799793 + USE1 chr19 17330021 + Exonic hg19 BLCA TCGA-MV-A51V 2 5'UTR-CDS Inter-chr q22.3 p13.11 453 ChimerSeq FusionScan TCGA_RNA-Seq CFDP1-WWOX CFDP1 chr16 75428987 - WWOX chr16 79245504 + Exonic hg19 BLCA TCGA-XF-A9T0 5 Out-of-Frame Intra-chr q23.1 q23.1 Tumor suppressor gene Seq+ 454 ChimerSeq FusionScan TCGA_RNA-Seq AHR-TSPAN13 AHR chr7 17338953 + TSPAN13 chr7 16815835 + Exonic hg19 BLCA TCGA-XF-A9T0 3 Out-of-Frame Intra-chr p21.1 Tumor suppressor gene Transcription factor p21.1 Tumor suppressor gene Seq+ 455 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPUL1-CNN1 HNRNPUL1 chr19 41800591 + CNN1 chr19 11651890 + Exonic hg19 BLCA TCGA-XF-AAMT 3 In-Frame Intra-chr q13.2 p13.2 Tumor suppressor gene Seq+ 456 ChimerSeq FusionScan TCGA_RNA-Seq DCAF8-FCRLA DCAF8 chr1 160231074 - FCRLA chr1 161682874 + Exonic hg19 BLCA TCGA-ZF-AA5P 3 5'UTR-CDS Intra-chr q23.2 q23.3 Seq+ 457 ChimerSeq FusionScan TCGA_RNA-Seq NRIP1-DECR1 NRIP1 chr21 16386664 - DECR1 chr8 91054955 + Exonic hg19 BLCA TCGA-ZF-AA5P 2 5'UTR-CDS Inter-chr q21.1 q21.3 Seq+ 458 ChimerSeq FusionScan TCGA_RNA-Seq RBM34-MARK1 RBM34 chr1 235311718 - MARK1 chr1 220752695 + Exonic hg19 BLCA TCGA-ZF-AA5P 2 Out-of-Frame Intra-chr q42.3 q41 CAMK:CAMKL Oncogene Seq+ 459 ChimerSeq FusionScan TCGA_RNA-Seq TRIB1-SAE1 TRIB1 chr8 126443504 + SAE1 chr19 47706927 + Exonic hg19 BLCA TCGA-XF-AAN0 2 Out-of-Frame Inter-chr q24.13 q13.32 Seq+ 460 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-BAGE5 CPSF6 chr12 69656342 + BAGE5 chr21 11058324 - Exonic hg19 BLCA TCGA-DK-AA75 2 3'UTR-3'UTR Inter-chr q15 461 ChimerSeq FusionScan TCGA_RNA-Seq PACS1-C1orf201 PACS1 chr11 65838313 + C1orf201 chr1 24687531 - Exonic hg19 BLCA TCGA-DK-AA75 2 In-Frame Inter-chr q13.1 Seq+ 462 ChimerSeq FusionScan TCGA_RNA-Seq C14orf43-NUBPL C14orf43 chr14 74253804 - NUBPL chr14 32068494 + Exonic hg19 BLCA TCGA-XF-AAMW 5 5'UTR-CDS Intra-chr q12 463 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPC-PAPOLA HNRNPC chr14 21737456 - PAPOLA chr14 97022183 + Exonic hg19 BLCA TCGA-XF-AAMW 3 5'UTR-CDS Intra-chr q11.2 q32.2 Seq+ 464 ChimerSeq FusionScan TCGA_RNA-Seq C14orf93-TIMM9 C14orf93 chr14 23479309 - TIMM9 chr14 58878689 - Exonic hg19 BLCA TCGA-XF-AAMW 2 5'UTR-5'UTR Intra-chr q11.2 q23.1 Seq+ 465 ChimerSeq FusionScan TCGA_RNA-Seq SPECC1L-UPB1 SPECC1L chr22 24666951 + UPB1 chr22 24906716 + Exonic hg19 BLCA TCGA-XF-AAMW 2 5'UTR-CDS Intra-chr q11.23 q11.23 Seq+ 466 ChimerSeq FusionScan TCGA_RNA-Seq TSPO-PRR5 TSPO chr22 43547610 + PRR5 chr22 45121123 + Exonic hg19 BLCA TCGA-XF-AAMW 2 5'UTR-5'UTR Intra-chr q13.2 q13.31 Tumor suppressor gene Seq+ 467 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHH1-L2HGDH PLEKHH1 chr14 68008710 + L2HGDH chr14 50736048 - Exonic hg19 BLCA TCGA-XF-AAMW 2 In-Frame Intra-chr q24.1 q21.3 Seq+ 468 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BLCA TCGA-ZF-A9R1 2 Out-of-Frame Intra-chr q22.2 q22.2 469 ChimerSeq FusionScan TCGA_RNA-Seq JUP-ACLY JUP chr17 39942839 - ACLY chr17 40035177 - Exonic hg19 BLCA TCGA-ZF-A9RD 3 5'UTR-CDS Intra-chr q21.2 Tumor suppressor gene q21.2 Seq+ 470 ChimerSeq FusionScan TCGA_RNA-Seq ACVR2A-MBD5 ACVR2A chr2 148602776 + MBD5 chr2 149240678 + Exonic hg19 BLCA TCGA-DK-AA76 2 In-Frame Intra-chr q22.3 Oncogene q23.1 Seq+ 471 ChimerSeq FusionScan TCGA_RNA-Seq TFDP1-UPF3A TFDP1 chr13 114265377 + UPF3A chr13 115070263 + Exonic hg19 BLCA TCGA-XF-AAN7 5 Out-of-Frame Intra-chr q34 Transcription factor q34 Seq+ 472 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BLCA TCGA-XF-AAN7 2 Out-of-Frame Intra-chr q22.2 q22.2 473 ChimerSeq FusionScan TCGA_RNA-Seq MED13L-TAOK3 MED13L chr12 116549232 - TAOK3 chr12 118651915 - Exonic hg19 BLCA TCGA-4Z-AA82 2 Out-of-Frame Intra-chr q24.21 q24.23 Seq+ 474 ChimerSeq FusionScan TCGA_RNA-Seq RNF4-FAM193A RNF4 chr4 2502465 + FAM193A chr4 2733501 + Exonic hg19 BLCA TCGA-4Z-AA82 2 Out-of-Frame Intra-chr p16.3 p16.3 Seq+ 475 ChimerSeq FusionScan TCGA_RNA-Seq NF1-SPACA3 NF1 chr17 29497015 + SPACA3 chr17 31323860 + Exonic hg19 BLCA TCGA-DK-AA6X 2 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 476 ChimerSeq FusionScan TCGA_RNA-Seq SHANK2-ANO1 SHANK2 chr11 70331418 - ANO1 chr11 70003052 + Exonic hg19 BLCA TCGA-XF-AAMQ 2 In-Frame Intra-chr q13.4 q13.3 Seq+ 477 ChimerSeq FusionScan TCGA_RNA-Seq EP400-TMPRSS12 EP400 chr12 132434581 + TMPRSS12 chr12 51237624 + Exonic hg19 BLCA TCGA-XF-A9SZ 3 5'UTR-CDS Intra-chr q24.33 Oncogene q13.12 Seq+ 478 ChimerSeq FusionScan TCGA_RNA-Seq SNRNP70-CDC42EP5 SNRNP70 chr19 49589818 + CDC42EP5 chr19 54982906 - Exonic hg19 BLCA TCGA-XF-A9SV 3 CDS-5'UTR Intra-chr q13.33 Seq+ 479 ChimerSeq FusionScan TCGA_RNA-Seq RALA-CAMK2B RALA chr7 39663424 + CAMK2B chr7 44260500 - Exonic hg19 BLCA TCGA-ZF-AA5H 7 5'UTR-5'UTR Intra-chr p14.1 p13 Seq+ 480 ChimerSeq FusionScan TCGA_RNA-Seq CBX3-CDK14 CBX3 chr7 26251376 + CDK14 chr7 90836479 + Exonic hg19 BLCA TCGA-ZF-AA5H 7 CDS-3'UTR Intra-chr p15.2 q21.13 Seq+ 481 ChimerSeq FusionScan TCGA_RNA-Seq CDK13-DDX56 CDK13 chr7 40041630 + DDX56 chr7 44609727 - Exonic hg19 BLCA TCGA-ZF-AA5H 4 Out-of-Frame Intra-chr p14.1 p13 Seq+ 482 ChimerSeq FusionScan TCGA_RNA-Seq C19orf42-CACNA1A C19orf42 chr19 16770205 - CACNA1A chr19 13366073 - Exonic hg19 BLCA TCGA-ZF-AA5H 2 Out-of-Frame Intra-chr p13.13 Seq+ 483 ChimerSeq FusionScan TCGA_RNA-Seq UPF1-CRTC1 UPF1 chr19 18963880 + CRTC1 chr19 18864309 + Exonic hg19 BLCA TCGA-DK-AA6W 2 In-Frame Intra-chr p13.11 p13.11 Oncogene Seq+ 484 ChimerSeq FusionScan TCGA_RNA-Seq ZNF727-CCDC132 ZNF727 chr7 63506002 + CCDC132 chr7 92900531 + Exonic hg19 BLCA TCGA-DK-AA6W 2 Out-of-Frame Intra-chr q11.21 Transcription factor 485 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-CCDC146 PTPN12 chr7 77166962 + CCDC146 chr7 76903010 + Exonic hg19 BLCA TCGA-4Z-AA87 4 In-Frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 486 ChimerSeq FusionScan TCGA_RNA-Seq AFF1-PTPN13 AFF1 chr4 87869723 + PTPN13 chr4 87718026 + Exonic hg19 BLCA TCGA-4Z-AA87 4 Out-of-Frame Intra-chr q21.3 Oncogene q21.3 Tumor suppressor gene Seq+ 487 ChimerSeq FusionScan TCGA_RNA-Seq TCEB1-STAU2 TCEB1 chr8 74871999 - STAU2 chr8 74529686 - Exonic hg19 BLCA TCGA-4Z-AA87 2 Out-of-Frame Intra-chr q21.11 Seq+ 488 ChimerSeq FusionScan TCGA_RNA-Seq IPO7-ZNF143 IPO7 chr11 9406394 + ZNF143 chr11 9549076 + Exonic hg19 BLCA TCGA-ZF-AA56 9 In-Frame Intra-chr p15.4 p15.4 Transcription factor Seq+ 489 ChimerSeq FusionScan TCGA_RNA-Seq MKRN2-FANCD2 MKRN2 chr3 12616505 + FANCD2 chr3 10091057 + Exonic hg19 BLCA TCGA-G2-AA3B 2 Out-of-Frame Intra-chr p25.2 p25.3 Oncogene 490 ChimerSeq FusionScan TCGA_RNA-Seq VMP1-RPS6KB1 VMP1 chr17 57915758 + RPS6KB1 chr17 57987922 + Exonic hg19 BLCA TCGA-G2-AA3B 2 In-Frame Intra-chr q23.1 q23.1 Oncogene Seq+ 491 ChimerSeq FusionScan TCGA_RNA-Seq MKRN2-FANCD2 MKRN2 chr3 12616505 + FANCD2 chr3 10105475 + Exonic hg19 BLCA TCGA-G2-AA3B 2 Out-of-Frame Intra-chr p25.2 p25.3 Oncogene 492 ChimerSeq FusionScan TCGA_RNA-Seq YWHAZ-GAL YWHAZ chr8 101964156 - GAL chr11 68452391 + Exonic hg19 BLCA TCGA-XF-AAMZ 11 5'UTR-5'UTR Inter-chr q22.3 q13.2 Seq+ 493 ChimerSeq FusionScan TCGA_RNA-Seq MYO10-PFDN2 MYO10 chr5 16711016 - PFDN2 chr1 161072165 - Exonic hg19 BLCA TCGA-XF-AAMZ 4 In-Frame Inter-chr p15.1 q23.3 Seq+ 494 ChimerSeq FusionScan TCGA_RNA-Seq YWHAZ-GAL YWHAZ chr8 101964156 - GAL chr11 68453061 + Exonic hg19 BLCA TCGA-XF-AAMZ 2 5'UTR-CDS Inter-chr q22.3 q13.2 Seq+ 495 ChimerSeq FusionScan TCGA_RNA-Seq CDKAL1-DNAH8 CDKAL1 chr6 20535625 + DNAH8 chr6 38850685 + Exonic hg19 BLCA TCGA-DK-AA6U 2 5'UTR-CDS Intra-chr p22.3 p21.2 Seq+ 496 ChimerSeq FusionScan TCGA_RNA-Seq CAMSAP1-C9orf86 CAMSAP1 chr9 138798845 - C9orf86 chr9 139717976 + Exonic hg19 BLCA TCGA-XF-AAMX 4 In-Frame Intra-chr q34.3 Seq+ 497 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHA5-PIK3C2G PLEKHA5 chr12 19489550 + PIK3C2G chr12 18715636 + Exonic hg19 BLCA TCGA-XF-AAMX 2 Out-of-Frame Intra-chr p12.3 p12.3 Seq+ 498 ChimerSeq FusionScan TCGA_RNA-Seq FOXK2-C17orf101 FOXK2 chr17 80478183 + C17orf101 chr17 80364358 - Exonic hg19 BLCA TCGA-XF-AAMX 2 Out-of-Frame Intra-chr q25.3 Transcription factor Seq+ 499 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992064 + VMP1 chr17 57917128 + Exonic hg19 BLCA TCGA-4Z-AA7Q 4 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 500 ChimerSeq FusionScan TCGA_RNA-Seq NCK1-PCCB NCK1 chr3 136581161 + PCCB chr3 136002678 + Exonic hg19 BLCA TCGA-4Z-AA7Q 3 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 501 ChimerSeq FusionScan TCGA_RNA-Seq PER1-AURKB PER1 chr17 8055654 - AURKB chr17 8108708 - Exonic hg19 BLCA TCGA-4Z-AA7Q 2 5'UTR-CDS Intra-chr p13.1 Oncogene p13.1 Oncogene 502 ChimerSeq FusionScan TCGA_RNA-Seq MAP4-SPINK8 MAP4 chr3 48130262 - SPINK8 chr3 48351436 - Exonic hg19 BLCA TCGA-4Z-AA7Q 2 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 503 ChimerSeq FusionScan TCGA_RNA-Seq DAP3-TIPRL DAP3 chr1 155679615 + TIPRL chr1 168160606 + Exonic hg19 BLCA TCGA-XF-A9SY 2 In-Frame Intra-chr q22 q24.2 Seq+ 504 ChimerSeq FusionScan TCGA_RNA-Seq ZNF713-COBRA1 ZNF713 chr7 55980416 + COBRA1 chr9 140166532 + Exonic hg19 BLCA TCGA-XF-A9SK 2 Out-of-Frame Inter-chr p11.2 Transcription factor 505 ChimerSeq FusionScan TCGA_RNA-Seq PROSC-CHMP1A PROSC chr8 37623873 + CHMP1A chr16 89713739 - Exonic hg19 BLCA TCGA-XF-A9SK 2 In-Frame Inter-chr q24.3 Seq+ 506 ChimerSeq FusionScan TCGA_RNA-Seq ATP11B-NET1 ATP11B chr3 182616560 + NET1 chr10 5493792 + Exonic hg19 BLCA TCGA-XF-AAN4 4 In-Frame Inter-chr q26.33 Oncogene p15.1 Seq+ 507 ChimerSeq FusionScan TCGA_RNA-Seq ILF3-ATG4D ILF3 chr19 10765163 + ATG4D chr19 10662572 + Exonic hg19 BLCA TCGA-XF-A9SI 2 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 508 ChimerSeq FusionScan TCGA_RNA-Seq R3HDM2-ZNF385A R3HDM2 chr12 57704046 - ZNF385A chr12 54769738 - Exonic hg19 BLCA TCGA-XF-AAMY 3 In-Frame Intra-chr q13.3 q13.13 Transcription factor Seq+ 509 ChimerSeq FusionScan TCGA_RNA-Seq CACNA1I-FBXW5 CACNA1I chr22 40078666 + FBXW5 chr9 139835623 - Exonic hg19 BLCA TCGA-XF-AAMY 2 Out-of-Frame Inter-chr q13.1 q34.3 Seq+ 510 ChimerSeq FusionScan TCGA_RNA-Seq LMAN2-GNB1 LMAN2 chr5 176761284 - GNB1 chr1 1770677 - Exonic hg19 BRCA TCGA-AO-A1KO 2 CDS-5'UTR Inter-chr q35.3 p36.33 511 ChimerSeq FusionScan TCGA_RNA-Seq RNF213-N4BP2L2 RNF213 chr17 78237577 + N4BP2L2 chr13 33101669 - Exonic hg19 BRCA TCGA-B6-A409 2 In-Frame Inter-chr q25.3 Oncogene q13.1 512 ChimerSeq FusionScan TCGA_RNA-Seq MED1-ABCC3 MED1 chr17 37604050 - ABCC3 chr17 48733192 + Exonic hg19 BRCA TCGA-BH-A0AW 7 In-Frame Intra-chr q12 Tumor suppressor gene q21.33 Seq+ 513 ChimerSeq FusionScan TCGA_RNA-Seq HDHD2-SNF8 HDHD2 chr18 44676748 - SNF8 chr17 47014486 - Exonic hg19 BRCA TCGA-BH-A0AW 2 5'UTR-CDS Inter-chr q21.1 q21.32 Seq+ 514 ChimerSeq FusionScan TCGA_RNA-Seq HOXB6-LYRM1 HOXB6 chr17 46681841 - LYRM1 chr16 20931443 + Exonic hg19 BRCA TCGA-BH-A0AW 2 5'UTR-CDS Inter-chr q21.32 Transcription factor p12.3 515 ChimerSeq FusionScan TCGA_RNA-Seq NOM1-MXI1 NOM1 chr7 156746992 + MXI1 chr10 112044581 + Exonic hg19 BRCA TCGA-BH-A0AW 2 Out-of-Frame Inter-chr q36.3 q25.2 Tumor suppressor gene Transcription factor 516 ChimerSeq FusionScan TCGA_RNA-Seq THRA-B4GALNT2 THRA chr17 38233861 + B4GALNT2 chr17 47236398 + Exonic hg19 BRCA TCGA-BH-A0AW 2 In-Frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.32 Seq+ 517 ChimerSeq FusionScan TCGA_RNA-Seq MED1-ABCC3 MED1 chr17 37604050 - ABCC3 chr17 48734062 + Exonic hg19 BRCA TCGA-BH-A0AW 2 In-Frame Intra-chr q12 Tumor suppressor gene q21.33 Seq+ 518 ChimerSeq FusionScan TCGA_RNA-Seq MYO1E-SIL1 MYO1E chr15 59548482 - SIL1 chr5 138463542 - Exonic hg19 BRCA TCGA-A2-A0SU 2 CDS-5'UTR Inter-chr q22.2 q31.2 Seq+ 519 ChimerSeq FusionScan TCGA_RNA-Seq UTRN-ECT2L UTRN chr6 144898424 + ECT2L chr6 139222084 + Exonic hg19 BRCA TCGA-B6-A0IQ 3 Out-of-Frame Intra-chr q24.2 q24.1 Seq+ 520 ChimerSeq FusionScan TCGA_RNA-Seq PBX1-CTNNA3 PBX1 chr1 164781386 + CTNNA3 chr10 68535282 - Exonic hg19 BRCA TCGA-B6-A0IQ 2 Out-of-Frame Inter-chr q23.3 Oncogene Transcription factor q21.3 Tumor suppressor gene Seq+ 521 ChimerSeq FusionScan TCGA_RNA-Seq ARID3A-PMEPA1 ARID3A chr19 968503 + PMEPA1 chr20 56234753 - Exonic hg19 BRCA TCGA-BH-A0AU 2 In-Frame Inter-chr p13.3 Transcription factor q13.31 Seq+ 522 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF17-EP300 ARHGEF17 chr11 73022875 + EP300 chr22 41545041 + Exonic hg19 BRCA TCGA-BH-A0AU 2 In-Frame Inter-chr q13.4 q13.2 Oncogene Seq+ 523 ChimerSeq FusionScan TCGA_RNA-Seq PPM1E-VMP1 PPM1E chr17 56833822 + VMP1 chr17 57886156 + Exonic hg19 BRCA TCGA-C8-A12M 3 Out-of-Frame Intra-chr q22 q23.1 Seq+ 524 ChimerSeq FusionScan TCGA_RNA-Seq SHANK2-CPT1A SHANK2 chr11 70935742 - CPT1A chr11 68582955 - Exonic hg19 BRCA TCGA-A8-A07W 6 5'UTR-5'UTR Intra-chr q13.4 q13.3 Seq+ 525 ChimerSeq FusionScan TCGA_RNA-Seq SH3GL1-TAX1BP1 SH3GL1 chr19 4400320 - TAX1BP1 chr7 27867356 + Exonic hg19 BRCA TCGA-A8-A07W 5 In-Frame Inter-chr p13.3 p15.2 Seq+ 526 ChimerSeq FusionScan TCGA_RNA-Seq PRPF19-DDB1 PRPF19 chr11 60668053 - DDB1 chr11 61091609 - Exonic hg19 BRCA TCGA-A8-A07W 4 In-Frame Intra-chr q12.2 q12.2 Seq+ 527 ChimerSeq FusionScan TCGA_RNA-Seq RFWD2-XPR1 RFWD2 chr1 176175707 - XPR1 chr1 180849211 + Exonic hg19 BRCA TCGA-A8-A07W 2 In-Frame Intra-chr q25.2 Tumor suppressor gene q25.3 Seq+ 528 ChimerSeq FusionScan TCGA_RNA-Seq BCAS4-PTPN1 BCAS4 chr20 49458437 + PTPN1 chr20 49194956 + Exonic hg19 BRCA TCGA-A8-A07W 2 In-Frame Intra-chr q13.13 q13.13 Tumor suppressor gene Seq+ 529 ChimerSeq FusionScan TCGA_RNA-Seq OVOL2-KIAA0922 OVOL2 chr20 18037300 - KIAA0922 chr4 154553869 + Exonic hg19 BRCA TCGA-C8-A1HN 3 Out-of-Frame Inter-chr p11.23 Transcription factor q31.3 Seq+ 530 ChimerSeq FusionScan TCGA_RNA-Seq DYNLRB1-ERGIC3 DYNLRB1 chr20 33114148 + ERGIC3 chr20 34130071 + Exonic hg19 BRCA TCGA-C8-A1HN 3 In-Frame Intra-chr q11.22 q11.22 Seq+ 531 ChimerSeq FusionScan TCGA_RNA-Seq LEMD3-XPOT LEMD3 chr12 65612399 + XPOT chr12 64833023 + Exonic hg19 BRCA TCGA-C8-A1HN 2 In-Frame Intra-chr q14.3 q14.2 Seq+ 532 ChimerSeq FusionScan TCGA_RNA-Seq UQCRC2-UCHL5 UQCRC2 chr16 21987564 + UCHL5 chr1 192993076 - Exonic hg19 BRCA TCGA-C8-A1HN 2 In-Frame Inter-chr q31.2 533 ChimerSeq FusionScan TCGA_RNA-Seq DOCK1-PCDH15 DOCK1 chr10 129179632 + PCDH15 chr10 56287637 - Exonic hg19 BRCA TCGA-C8-A1HN 2 Out-of-Frame Intra-chr q26.2 q21.1 Seq+ 534 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD17-RPRD1B ANKRD17 chr4 73979508 - RPRD1B chr20 36694482 + Exonic hg19 BRCA TCGA-C8-A1HN 2 Out-of-Frame Inter-chr q13.3 q11.23 Seq+ 535 ChimerSeq FusionScan TCGA_RNA-Seq HDAC2-TRDN HDAC2 chr6 114292020 - TRDN chr6 123545276 - Exonic hg19 BRCA TCGA-BH-A203 7 In-Frame Intra-chr q21 q22.31 Seq+ 536 ChimerSeq FusionScan TCGA_RNA-Seq TRPS1-PDE4DIP TRPS1 chr8 116599227 - PDE4DIP chr1 144915639 - Exonic hg19 BRCA TCGA-BH-A203 3 In-Frame Inter-chr q23.3 Transcription factor q21.2 Oncogene Seq+ 537 ChimerSeq FusionScan TCGA_RNA-Seq RFWD2-KIF14 RFWD2 chr1 176118141 - KIF14 chr1 200578056 - Exonic hg19 BRCA TCGA-BH-A203 3 In-Frame Intra-chr q25.2 Tumor suppressor gene q32.1 Seq+ 538 ChimerSeq FusionScan TCGA_RNA-Seq FIG4-WASF1 FIG4 chr6 110098263 + WASF1 chr6 110424760 - Exonic hg19 BRCA TCGA-BH-A203 3 In-Frame Intra-chr q21 q21 Seq+ 539 ChimerSeq FusionScan TCGA_RNA-Seq TIMM17A-RASSF5 TIMM17A chr1 201926702 + RASSF5 chr1 206711500 + Exonic hg19 BRCA TCGA-BH-A203 2 In-Frame Intra-chr q32.1 q32.1 Tumor suppressor gene Seq+ 540 ChimerSeq FusionScan TCGA_RNA-Seq CEP170-RAD51B CEP170 chr1 243349080 - RAD51B chr14 68758600 + Exonic hg19 BRCA TCGA-BH-A203 2 In-Frame Inter-chr q24.1 541 ChimerSeq FusionScan TCGA_RNA-Seq RFWD2-KIF14 RFWD2 chr1 176132004 - KIF14 chr1 200578056 - Exonic hg19 BRCA TCGA-BH-A203 2 In-Frame Intra-chr q25.2 Tumor suppressor gene q32.1 Seq+ 542 ChimerSeq FusionScan TCGA_RNA-Seq ARID4B-B3GALNT2 ARID4B chr1 235357327 - B3GALNT2 chr1 235613655 - Exonic hg19 BRCA TCGA-BH-A203 2 Out-of-Frame Intra-chr q42.3 Seq+ 543 ChimerSeq FusionScan TCGA_RNA-Seq HSP90AB1-SLC29A1 HSP90AB1 chr6 44214932 + SLC29A1 chr6 44194999 + Exonic hg19 BRCA TCGA-BH-A0WA 4 5'UTR-5'UTR Intra-chr p21.1 Oncogene p21.1 Seq+ 544 ChimerSeq FusionScan TCGA_RNA-Seq HEYL-COL9A2 HEYL chr1 40105217 - COL9A2 chr1 40777387 - Exonic hg19 BRCA TCGA-E2-A15E 4 Out-of-Frame Intra-chr p34.2 Transcription factor p34.2 Seq+ 545 ChimerSeq FusionScan TCGA_RNA-Seq H2AFY-CNOT6 H2AFY chr5 134688635 - CNOT6 chr5 179991488 + Exonic hg19 BRCA TCGA-E2-A15E 4 In-Frame Intra-chr q31.1 q35.3 Seq+ 546 ChimerSeq FusionScan TCGA_RNA-Seq ERLIN2-GSR ERLIN2 chr8 37594196 + GSR chr8 30560757 - Exonic hg19 BRCA TCGA-E2-A15E 2 5'UTR-CDS Intra-chr p11.23 p12 547 ChimerSeq FusionScan TCGA_RNA-Seq LETM1-POLN LETM1 chr4 1843073 - POLN chr4 2083470 - Exonic hg19 BRCA TCGA-E2-A15E 2 Out-of-Frame Intra-chr p16.3 p16.3 Seq+ 548 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1430-CCDC110 KIAA1430 chr4 186096939 - CCDC110 chr4 186383862 - Exonic hg19 BRCA TCGA-E2-A15E 2 In-Frame Intra-chr q35.1 Seq+ 549 ChimerSeq FusionScan TCGA_RNA-Seq PTPN1-PREX1 PTPN1 chr20 49191191 + PREX1 chr20 47361684 - Exonic hg19 BRCA TCGA-E2-A15E 2 In-Frame Intra-chr q13.13 Tumor suppressor gene q13.13 Seq+ 550 ChimerSeq FusionScan TCGA_RNA-Seq CBX3-GARS CBX3 chr7 26241446 + GARS chr7 30665849 + Exonic hg19 BRCA TCGA-A2-A0CW 11 5'UTR-CDS Intra-chr p15.2 p14.3 Seq+ 551 ChimerSeq FusionScan TCGA_RNA-Seq DPM3-KCNN3 DPM3 chr1 155112966 - KCNN3 chr1 154794660 - Exonic hg19 BRCA TCGA-A2-A0CW 8 5'UTR-CDS Intra-chr q22 q21.3 Seq+ 552 ChimerSeq FusionScan TCGA_RNA-Seq CBX3-GARS CBX3 chr7 26241181 + GARS chr7 30665849 + Exonic hg19 BRCA TCGA-A2-A0CW 4 5'UTR-CDS Intra-chr p15.2 p14.3 Seq+ 553 ChimerSeq FusionScan TCGA_RNA-Seq HIVEP3-NUP153 HIVEP3 chr1 42501477 - NUP153 chr6 17616926 - Exonic hg19 BRCA TCGA-A2-A0CW 2 3'UTR-CDS Inter-chr p34.2 Tumor suppressor gene Transcription factor p22.3 Seq+ 554 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-A2-A0CW 2 5'UTR-5'UTR Inter-chr p13.2 p22 555 ChimerSeq FusionScan TCGA_RNA-Seq KCNN3-DCST2 KCNN3 chr1 154794564 - DCST2 chr1 154999191 - Exonic hg19 BRCA TCGA-A2-A0CW 2 Out-of-Frame Intra-chr q21.3 q21.3 Seq+ 556 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BRCA TCGA-D8-A143 2 Out-of-Frame Intra-chr q22.2 q22.2 557 ChimerSeq FusionScan TCGA_RNA-Seq RARA-PCTP RARA chr17 38474700 + PCTP chr17 53848466 + Exonic hg19 BRCA TCGA-AN-A0FV 11 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 558 ChimerSeq FusionScan TCGA_RNA-Seq RARA-PCTP RARA chr17 38465538 + PCTP chr17 53848466 + Exonic hg19 BRCA TCGA-AN-A0FV 8 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 559 ChimerSeq FusionScan TCGA_RNA-Seq STX16-MYT1 STX16 chr20 57227143 + MYT1 chr20 62821415 + Exonic hg19 BRCA TCGA-AN-A0FV 5 5'UTR-5'UTR Intra-chr q13.32 Other:WEE Transcription factor Seq+ 560 ChimerSeq FusionScan TCGA_RNA-Seq TMEM135-C11orf67 TMEM135 chr11 86802437 + C11orf67 chr11 77553524 + Exonic hg19 BRCA TCGA-AN-A0FV 3 CDS-5'UTR Intra-chr q14.2 Seq+ 561 ChimerSeq FusionScan TCGA_RNA-Seq WIPF2-SEZ6 WIPF2 chr17 38375744 + SEZ6 chr17 27309057 - Exonic hg19 BRCA TCGA-AN-A0FV 2 5'UTR-CDS Intra-chr q21.2 q11.2 Seq+ 562 ChimerSeq FusionScan TCGA_RNA-Seq TRAF3-MYO16 TRAF3 chr14 103352606 + MYO16 chr13 109318233 + Exonic hg19 BRCA TCGA-B6-A400 2 Out-of-Frame Inter-chr q32.32 Seq+ 563 ChimerSeq FusionScan TCGA_RNA-Seq PLCH1-RANBP3 PLCH1 chr3 155421934 - RANBP3 chr19 5933490 - Exonic hg19 BRCA TCGA-B6-A400 2 5'UTR-CDS Inter-chr q25.31 p13.3 564 ChimerSeq FusionScan TCGA_RNA-Seq CPT1A-KCNG1 CPT1A chr11 68548107 - KCNG1 chr20 49626901 - Exonic hg19 BRCA TCGA-EW-A2FW 2 CDS-5'UTR Inter-chr q13.3 q13.13 Seq+ 565 ChimerSeq FusionScan TCGA_RNA-Seq PLCG1-TAF4 PLCG1 chr20 39766498 + TAF4 chr20 60584230 - Exonic hg19 BRCA TCGA-EW-A2FW 2 Out-of-Frame Intra-chr q12 Oncogene Seq+ 566 ChimerSeq FusionScan TCGA_RNA-Seq PPFIA1-RHOD PPFIA1 chr11 70118542 + RHOD chr11 66833366 + Exonic hg19 BRCA TCGA-EW-A1J3 8 In-Frame Intra-chr q13.3 q13.2 Seq+ 567 ChimerSeq FusionScan TCGA_RNA-Seq RARA-PSMD3 RARA chr17 38487648 + PSMD3 chr17 38151206 + Exonic hg19 BRCA TCGA-EW-A1J3 7 Out-of-Frame Intra-chr q21.2 Oncogene Transcription factor q21.1 Seq+ 568 ChimerSeq FusionScan TCGA_RNA-Seq RARA-PSMD3 RARA chr17 38499119 + PSMD3 chr17 38151206 + Exonic hg19 BRCA TCGA-EW-A1J3 3 Out-of-Frame Intra-chr q21.2 Oncogene Transcription factor q21.1 Seq+ 569 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-EW-A1J3 3 5'UTR-5'UTR Inter-chr p13.2 p22 570 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175388437 - Exonic hg19 BRCA TCGA-A8-A081 3 5'UTR-CDS Inter-chr q21.1 q35.2 571 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1L1-GAB2 WHSC1L1 chr8 38239316 - GAB2 chr11 77991947 - Exonic hg19 BRCA TCGA-AO-A1KT 6 5'UTR-5'UTR Inter-chr p11.23 Tumor suppressor gene q14.1 Seq+ 572 ChimerSeq FusionScan TCGA_RNA-Seq DDB1-DAK DDB1 chr11 61100379 - DAK chr11 61105412 + Exonic hg19 BRCA TCGA-AO-A1KT 3 Out-of-Frame Intra-chr q12.2 Seq+ 573 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-B6-A0WZ 2 5'UTR-5'UTR Inter-chr p13.2 p22 574 ChimerSeq FusionScan TCGA_RNA-Seq VIPR2-SCTR VIPR2 chr7 158826903 - SCTR chr2 120199175 - Exonic hg19 BRCA TCGA-E2-A1IL 2 Out-of-Frame Inter-chr q36.3 q14.2 575 ChimerSeq FusionScan TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12022903 + NTRK3 chr15 88483984 - Exonic hg19 BRCA TCGA-AO-A03U 3 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 576 ChimerSeq FusionScan TCGA_RNA-Seq HIVEP3-ZBED4 HIVEP3 chr1 42041214 - ZBED4 chr22 50276981 + Exonic hg19 BRCA TCGA-A2-A259 2 CDS-5'UTR Inter-chr p34.2 Tumor suppressor gene Transcription factor q13.33 Transcription factor 577 ChimerSeq FusionScan TCGA_RNA-Seq CRHR1-OSBPL7 CRHR1 chr17 43699407 + OSBPL7 chr17 45890769 - Exonic hg19 BRCA TCGA-AC-A2FF 2 5'UTR-CDS Intra-chr q21.31 q21.32 Seq+ 578 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R5C-EIF4EBP1 PPP2R5C chr14 102252520 + EIF4EBP1 chr8 37914598 + Exonic hg19 BRCA TCGA-AO-A0JI 2 In-Frame Inter-chr q32.31 Tumor suppressor gene p11.23 579 ChimerSeq FusionScan TCGA_RNA-Seq TMEM109-CD5 TMEM109 chr11 60681740 + CD5 chr11 60882527 + Exonic hg19 BRCA TCGA-BH-A28Q 3 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 580 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-CHMP1A CPSF6 chr12 69656342 + CHMP1A chr16 89713739 - Exonic hg19 BRCA TCGA-A7-A5ZX 2 3'UTR-3'UTR Inter-chr q15 q24.3 Seq+ 581 ChimerSeq FusionScan TCGA_RNA-Seq RHOBTB1-CTNNA3 RHOBTB1 chr10 62701561 - CTNNA3 chr10 68381542 - Exonic hg19 BRCA TCGA-A7-A5ZX 2 5'UTR-CDS Intra-chr q21.2 q21.3 Tumor suppressor gene 582 ChimerSeq FusionScan TCGA_RNA-Seq PNPLA7-WDR85 PNPLA7 chr9 140409830 - WDR85 chr9 140450100 - Exonic hg19 BRCA TCGA-A7-A426 5 In-Frame Intra-chr q34.3 Seq+ 583 ChimerSeq FusionScan TCGA_RNA-Seq NIPBL-SLC30A9 NIPBL chr5 36877280 + SLC30A9 chr4 42065002 + Exonic hg19 BRCA TCGA-A7-A6VV 3 5'UTR-CDS Inter-chr p13.2 p13 Seq+ 584 ChimerSeq FusionScan TCGA_RNA-Seq NIPBL-SLC30A9 NIPBL chr5 36877280 + SLC30A9 chr4 42062207 + Exonic hg19 BRCA TCGA-A7-A6VV 3 5'UTR-CDS Inter-chr p13.2 p13 Seq+ 585 ChimerSeq FusionScan TCGA_RNA-Seq XYLB-ACVR2B XYLB chr3 38442476 + ACVR2B chr3 38518777 + Exonic hg19 BRCA TCGA-A7-A6VV 2 Out-of-Frame Intra-chr p22.2 p22.2 586 ChimerSeq FusionScan TCGA_RNA-Seq ABTB2-LMO2 ABTB2 chr11 34378247 - LMO2 chr11 33903433 - Exonic hg19 BRCA TCGA-A7-A6VV 2 CDS-5'UTR Intra-chr p13 p13 Seq+ 587 ChimerSeq FusionScan TCGA_RNA-Seq TM9SF3-SLIT1 TM9SF3 chr10 98346490 - SLIT1 chr10 98808875 - Exonic hg19 BRCA TCGA-A7-A6VV 2 Out-of-Frame Intra-chr q24.1 q24.1 Seq+ 588 ChimerSeq FusionScan TCGA_RNA-Seq TUT1-BSCL2 TUT1 chr11 62356502 - BSCL2 chr11 62462183 - Exonic hg19 BRCA TCGA-B6-A0I1 6 In-Frame Intra-chr q12.3 q12.3 Seq+ 589 ChimerSeq FusionScan TCGA_RNA-Seq SCARB1-DHX37 SCARB1 chr12 125348140 - DHX37 chr12 125462036 - Exonic hg19 BRCA TCGA-B6-A0I1 2 In-Frame Intra-chr q24.31 q24.31 Seq+ 590 ChimerSeq FusionScan TCGA_RNA-Seq RNH1-DEAF1 RNH1 chr11 507112 - DEAF1 chr11 644654 - Exonic hg19 BRCA TCGA-B6-A0I1 2 5'UTR-CDS Intra-chr Tumor suppressor gene Transcription factor Seq+ 591 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-OBFC2B PVT1 chr8 128806980 + OBFC2B chr12 56619156 + Exonic hg19 BRCA TCGA-B6-A0I1 2 5'UTR-CDS Inter-chr q24.21 592 ChimerSeq FusionScan TCGA_RNA-Seq TIMM50-IL29 TIMM50 chr19 39973796 + IL29 chr19 39787444 + Exonic hg19 BRCA TCGA-B6-A0I1 2 Out-of-Frame Intra-chr q13.2 593 ChimerSeq FusionScan TCGA_RNA-Seq FOXP1-RGAG4 FOXP1 chr3 71542576 - RGAG4 chrX 71347560 - Exonic hg19 BRCA TCGA-BH-A0BR 7 5'UTR-3'UTR Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 594 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D9-CORO1C TBC1D9 chr4 141591873 - CORO1C chr12 109072170 - Exonic hg19 BRCA TCGA-BH-A0BR 2 In-Frame Inter-chr q31.21 q24.11 Seq+ 595 ChimerSeq FusionScan TCGA_RNA-Seq TANC1-PKP4 TANC1 chr2 159954346 + PKP4 chr2 159459581 + Exonic hg19 BRCA TCGA-D8-A1XK 4 Out-of-Frame Intra-chr q24.2 q24.1 Seq+ 596 ChimerSeq FusionScan TCGA_RNA-Seq UBASH3B-FOLH1B UBASH3B chr11 122526918 + FOLH1B chr11 89413776 + Exonic hg19 BRCA TCGA-D8-A1XK 2 Out-of-Frame Intra-chr q24.1 q14.3 Seq+ 597 ChimerSeq FusionScan TCGA_RNA-Seq RTN3-CSMD1 RTN3 chr11 63449250 + CSMD1 chr8 3855632 - Exonic hg19 BRCA TCGA-AC-A2QH 2 In-Frame Inter-chr q13.1 p23.2 Tumor suppressor gene Seq+ 598 ChimerSeq FusionScan TCGA_RNA-Seq CDH2-KIAA1328 CDH2 chr18 25727636 - KIAA1328 chr18 34646852 + Exonic hg19 BRCA TCGA-AC-A2QH 2 Out-of-Frame Intra-chr q12.1 Oncogene q12.2 Seq+ 599 ChimerSeq FusionScan TCGA_RNA-Seq RANBP2-RGPD4 RANBP2 chr2 109352705 + RGPD4 chr2 108459464 + Exonic hg19 BRCA TCGA-AC-A2QH 2 Out-of-Frame Intra-chr q13 q12.3 600 ChimerSeq FusionScan TCGA_RNA-Seq YWHAB-STK4 YWHAB chr20 43514527 + STK4 chr20 43615772 + Exonic hg19 BRCA TCGA-A8-A09A 2 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 601 ChimerSeq FusionScan TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23739997 - APOO chrX 23899069 - Exonic hg19 BRCA TCGA-A7-A13D 10 In-Frame Intra-chr p22.11 p22.11 Seq+ 602 ChimerSeq FusionScan TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23761241 - APOO chrX 23851729 - Exonic hg19 BRCA TCGA-A7-A13D 6 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 603 ChimerSeq FusionScan TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23761241 - APOO chrX 23851627 - Exonic hg19 BRCA TCGA-A7-A13D 6 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 604 ChimerSeq FusionScan TCGA_RNA-Seq MTF2-RPL5 MTF2 chr1 93581175 + RPL5 chr1 93306107 + Exonic hg19 BRCA TCGA-A7-A13D 6 Out-of-Frame Intra-chr p22.1 Transcription factor p22.1 Tumor suppressor gene Seq+ 605 ChimerSeq FusionScan TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23748643 - APOO chrX 23851627 - Exonic hg19 BRCA TCGA-A7-A13D 5 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 606 ChimerSeq FusionScan TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23748643 - APOO chrX 23851729 - Exonic hg19 BRCA TCGA-A7-A13D 4 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 607 ChimerSeq FusionScan TCGA_RNA-Seq TMEM123-MMP27 TMEM123 chr11 102319542 - MMP27 chr11 102563772 - Exonic hg19 BRCA TCGA-A7-A13D 4 Out-of-Frame Intra-chr q22.2 q22.2 Seq+ 608 ChimerSeq FusionScan TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23731251 - APOO chrX 23899069 - Exonic hg19 BRCA TCGA-A7-A13D 4 Out-of-Frame Intra-chr p22.11 p22.11 Seq+ 609 ChimerSeq FusionScan TCGA_RNA-Seq ASXL1-TM9SF4 ASXL1 chr20 30956926 + TM9SF4 chr20 30720815 + Exonic hg19 BRCA TCGA-A7-A13D 3 In-Frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 610 ChimerSeq FusionScan TCGA_RNA-Seq PARN-RRN3 PARN chr16 14711446 - RRN3 chr16 15178562 - Exonic hg19 BRCA TCGA-A7-A13D 3 In-Frame Intra-chr p13.11 Seq+ 611 ChimerSeq FusionScan TCGA_RNA-Seq DPP3-PACS1 DPP3 chr11 66264948 + PACS1 chr11 65998018 + Exonic hg19 BRCA TCGA-A7-A13D 2 In-Frame Intra-chr q13.2 q13.1 Seq+ 612 ChimerSeq FusionScan TCGA_RNA-Seq PSMD12-PITPNC1 PSMD12 chr17 65362527 - PITPNC1 chr17 65528917 + Exonic hg19 BRCA TCGA-A7-A13D 2 In-Frame Intra-chr q24.2 q24.2 Seq+ 613 ChimerSeq FusionScan TCGA_RNA-Seq NEBL-FBXO11 NEBL chr10 21169722 - FBXO11 chr2 48066908 - Exonic hg19 BRCA TCGA-A7-A13D 2 Out-of-Frame Inter-chr p12.31 p16.3 Seq+ 614 ChimerSeq FusionScan TCGA_RNA-Seq TAF4-GATA5 TAF4 chr20 60639506 - GATA5 chr20 61040977 - Exonic hg19 BRCA TCGA-A7-A13D 2 Out-of-Frame Intra-chr q13.33 Tumor suppressor gene Transcription factor Seq+ 615 ChimerSeq FusionScan TCGA_RNA-Seq ALMS1-TRAPPC12 ALMS1 chr2 73718625 + TRAPPC12 chr2 3447549 + Exonic hg19 BRCA TCGA-A7-A13D 2 Out-of-Frame Intra-chr p13.1 616 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHO2-ZNF609 PLEKHO2 chr15 65140941 + ZNF609 chr15 64915025 + Exonic hg19 BRCA TCGA-A7-A13D 2 In-Frame Intra-chr q22.31 q22.31 Transcription factor Seq+ 617 ChimerSeq FusionScan TCGA_RNA-Seq ARID1A-DHDDS ARID1A chr1 27059283 + DHDDS chr1 26764658 + Exonic hg19 BRCA TCGA-A7-A13D 2 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 Seq+ 618 ChimerSeq FusionScan TCGA_RNA-Seq EXOC6B-SFXN5 EXOC6B chr2 72945231 - SFXN5 chr2 73250343 - Exonic hg19 BRCA TCGA-A7-A13D 2 In-Frame Intra-chr p13.2 p13.2 Seq+ 619 ChimerSeq FusionScan TCGA_RNA-Seq PREX1-EHBP1 PREX1 chr20 47444178 - EHBP1 chr2 62934031 + Exonic hg19 BRCA TCGA-AO-A1KS 4 CDS-5'UTR Inter-chr q13.13 p15 Seq+ 620 ChimerSeq FusionScan TCGA_RNA-Seq DNM1L-TMTC1 DNM1L chr12 32832399 + TMTC1 chr12 29709933 - Exonic hg19 BRCA TCGA-AO-A1KS 2 Out-of-Frame Intra-chr p11.21 p11.22 621 ChimerSeq FusionScan TCGA_RNA-Seq FN1-FAM82B FN1 chr2 216238044 - FAM82B chr8 87487182 - Exonic hg19 BRCA TCGA-AO-A1KS 2 In-Frame Inter-chr q35 Oncogene 622 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-AO-A1KS 2 5'UTR-5'UTR Inter-chr p13.2 p22 623 ChimerSeq FusionScan TCGA_RNA-Seq YWHAG-CPNE1 YWHAG chr7 75988038 - CPNE1 chr20 34220845 - Exonic hg19 BRCA TCGA-AR-A1AW 2 In-Frame Inter-chr q11.23 q11.22 624 ChimerSeq FusionScan TCGA_RNA-Seq METTL9-CASK METTL9 chr16 21636436 + CASK chrX 41604854 - Exonic hg19 BRCA TCGA-E9-A3X8 2 Out-of-Frame Inter-chr p11.4 CAMK:CASK 625 ChimerSeq FusionScan TCGA_RNA-Seq SLC39A11-SDK2 SLC39A11 chr17 71084795 - SDK2 chr17 71335079 - Exonic hg19 BRCA TCGA-D8-A27M 4 In-Frame Intra-chr q25.1 q25.1 Seq+ 626 ChimerSeq FusionScan TCGA_RNA-Seq IGF1R-ADPGK IGF1R chr15 99251336 + ADPGK chr15 73064186 - Exonic hg19 BRCA TCGA-GM-A2DK 2 Out-of-Frame Intra-chr q26.3 TK:InsR Oncogene q24.1 Seq+ 627 ChimerSeq FusionScan TCGA_RNA-Seq LRP5-ALKBH5 LRP5 chr11 68080273 + ALKBH5 chr17 18098268 + Exonic hg19 BRCA TCGA-PE-A5DC 3 Out-of-Frame Inter-chr q13.2 p11.2 Seq+ 628 ChimerSeq FusionScan TCGA_RNA-Seq TNRC6B-RPLP1 TNRC6B chr22 40521866 + RPLP1 chr15 69747508 + Exonic hg19 BRCA TCGA-LD-A66U 2 In-Frame Inter-chr q13.1 q23 629 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-AN-A0XP 2 5'UTR-5'UTR Inter-chr p13.2 p22 630 ChimerSeq FusionScan TCGA_RNA-Seq NOTCH2NL-ATXN10 NOTCH2NL chr1 145248894 + ATXN10 chr22 46085591 + Exonic hg19 BRCA TCGA-C8-A133 2 In-Frame Inter-chr q21.1 q13.31 631 ChimerSeq FusionScan TCGA_RNA-Seq ALDOA-CLCN7 ALDOA chr16 30075826 + CLCN7 chr16 1499328 - Exonic hg19 BRCA TCGA-MS-A51U 2 5'UTR-CDS Intra-chr p11.2 p13.3 632 ChimerSeq FusionScan TCGA_RNA-Seq CMTM8-RAF1 CMTM8 chr3 32280611 + RAF1 chr3 12660246 - Exonic hg19 BRCA TCGA-E2-A155 3 CDS-5'UTR Intra-chr p22.3 p25.2 TKL:RAF Oncogene Seq+ 633 ChimerSeq FusionScan TCGA_RNA-Seq MBOAT1-HBS1L MBOAT1 chr6 20212366 - HBS1L chr6 135371785 - Exonic hg19 BRCA TCGA-E2-A155 3 Out-of-Frame Intra-chr p22.3 q23.3 Seq+ 634 ChimerSeq FusionScan TCGA_RNA-Seq ZNF322-PPIL6 ZNF322 chr6 26658785 - PPIL6 chr6 109721373 - Exonic hg19 BRCA TCGA-E2-A155 2 5'UTR-CDS Intra-chr p22.2 Transcription factor q21 Seq+ 635 ChimerSeq FusionScan TCGA_RNA-Seq ATXN1-PTPRK ATXN1 chr6 16753463 - PTPRK chr6 128411137 - Exonic hg19 BRCA TCGA-E2-A155 2 5'UTR-CDS Intra-chr p22.3 Tumor suppressor gene Seq+ 636 ChimerSeq FusionScan TCGA_RNA-Seq RALGAPA2-YLPM1 RALGAPA2 chr20 20693017 - YLPM1 chr14 75295915 + Exonic hg19 BRCA TCGA-E2-A1B5 2 In-Frame Inter-chr p11.23 q24.3 637 ChimerSeq FusionScan TCGA_RNA-Seq NTRK2-S1PR3 NTRK2 chr9 87367000 + S1PR3 chr9 91615968 + Exonic hg19 BRCA TCGA-E2-A1B5 2 CDS-5'UTR Intra-chr q21.33 Oncogene q22.1 638 ChimerSeq FusionScan TCGA_RNA-Seq ABTB2-TYR ABTB2 chr11 34378247 - TYR chr11 89017940 + Exonic hg19 BRCA TCGA-AC-A2BK 4 Out-of-Frame Intra-chr p13 q14.3 Seq+ 639 ChimerSeq FusionScan TCGA_RNA-Seq ABTB2-TYR ABTB2 chr11 34378247 - TYR chr11 89028310 + Exonic hg19 BRCA TCGA-AC-A2BK 3 In-Frame Intra-chr p13 q14.3 Seq+ 640 ChimerSeq FusionScan TCGA_RNA-Seq CAPRIN1-CAT CAPRIN1 chr11 34093534 + CAT chr11 34470738 + Exonic hg19 BRCA TCGA-AC-A2BK 3 In-Frame Intra-chr p13 p13 Tumor suppressor gene Seq+ 641 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57987972 + VMP1 chr17 57886156 + Exonic hg19 BRCA TCGA-AC-A2BK 2 Out-of-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 642 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R2A-APP PPP2R2A chr8 26151256 + APP chr21 27484463 - Exonic hg19 BRCA TCGA-AC-A2BK 2 Out-of-Frame Inter-chr p21.2 q21.3 Seq+ 643 ChimerSeq FusionScan TCGA_RNA-Seq FRMD5-COG3 FRMD5 chr15 44487150 - COG3 chr13 46103925 + Exonic hg19 BRCA TCGA-AC-A2BK 2 Out-of-Frame Inter-chr q15.3 q14.13 644 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0195-ICT1 KIAA0195 chr17 73452832 + ICT1 chr17 73013172 + Exonic hg19 BRCA TCGA-JL-A3YW 7 5'UTR-CDS Intra-chr Seq+ 645 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57915655 + Exonic hg19 BRCA TCGA-JL-A3YW 3 Out-of-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 646 ChimerSeq FusionScan TCGA_RNA-Seq NFIA-FGGY NFIA chr1 61849037 + FGGY chr1 60125890 + Exonic hg19 BRCA TCGA-JL-A3YW 2 Out-of-Frame Intra-chr p31.3 Transcription factor p32.1 Seq+ 647 ChimerSeq FusionScan TCGA_RNA-Seq KAT6A-ADAM5P KAT6A chr8 41905895 - ADAM5P chr8 39258851 + Exonic hg19 BRCA TCGA-A7-A0D9 7 CDS-5'UTR Intra-chr p11.21 Oncogene 648 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1L1-RAB11FIP1 WHSC1L1 chr8 38153313 - RAB11FIP1 chr8 37735069 - Exonic hg19 BRCA TCGA-A7-A0D9 4 In-Frame Intra-chr p11.23 Tumor suppressor gene p11.23 Seq+ 649 ChimerSeq FusionScan TCGA_RNA-Seq DNM2-SLC44A2 DNM2 chr19 10886582 + SLC44A2 chr19 10736928 + Exonic hg19 BRCA TCGA-OL-A5D6 2 In-Frame Intra-chr p13.2 p13.2 Seq+ 650 ChimerSeq FusionScan TCGA_RNA-Seq SNAI1-SLC9A8 SNAI1 chr20 48599678 + SLC9A8 chr20 48479465 + Exonic hg19 BRCA TCGA-OL-A5D6 2 Out-of-Frame Intra-chr q13.13 Transcription factor q13.13 Seq+ 651 ChimerSeq FusionScan TCGA_RNA-Seq PI4KB-SELENBP1 PI4KB chr1 151298647 - SELENBP1 chr1 151342245 - Exonic hg19 BRCA TCGA-A8-A07C 2 Out-of-Frame Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 652 ChimerSeq FusionScan TCGA_RNA-Seq XRN1-PIP4K2A XRN1 chr3 142166711 - PIP4K2A chr10 22898646 - Exonic hg19 BRCA TCGA-A8-A07C 2 In-Frame Inter-chr q23 p12.2 Seq+ 653 ChimerSeq FusionScan TCGA_RNA-Seq TACC2-ATE1 TACC2 chr10 123892249 + ATE1 chr10 123629553 - Exonic hg19 BRCA TCGA-A8-A07C 2 Out-of-Frame Intra-chr q26.13 q26.13 Seq+ 654 ChimerSeq FusionScan TCGA_RNA-Seq EHBP1-FAM59B EHBP1 chr2 63223901 + FAM59B chr2 26399212 + Exonic hg19 BRCA TCGA-A8-A07C 2 In-Frame Intra-chr p15 Seq+ 655 ChimerSeq FusionScan TCGA_RNA-Seq UBR5-ZNF512 UBR5 chr8 103424400 - ZNF512 chr2 27820933 + Exonic hg19 BRCA TCGA-A8-A07C 2 In-Frame Inter-chr q22.3 Oncogene p23.3 Transcription factor 656 ChimerSeq FusionScan TCGA_RNA-Seq EFNA3-USP21 EFNA3 chr1 155058681 + USP21 chr1 161130409 + Exonic hg19 BRCA TCGA-AR-A0TT 3 CDS-5'UTR Intra-chr q21.3 q23.3 Seq+ 657 ChimerSeq FusionScan TCGA_RNA-Seq MTF1-SF3A3 MTF1 chr1 38322922 - SF3A3 chr1 38435407 - Exonic hg19 BRCA TCGA-AR-A0TT 2 In-Frame Intra-chr p34.3 Transcription factor p34.3 Seq+ 658 ChimerSeq FusionScan TCGA_RNA-Seq PTPRM-KCTD1 PTPRM chr18 7926681 + KCTD1 chr18 24039889 - Exonic hg19 BRCA TCGA-E9-A3QA 2 In-Frame Intra-chr p11.23 q11.2 Seq+ 659 ChimerSeq FusionScan TCGA_RNA-Seq CD9-PBXIP1 CD9 chr12 6309731 + PBXIP1 chr1 154917593 - Exonic hg19 BRCA TCGA-B6-A0RE 2 Out-of-Frame Inter-chr p13.31 q21.3 Seq+ 660 ChimerSeq FusionScan TCGA_RNA-Seq MYO1D-TEX2 MYO1D chr17 31203795 - TEX2 chr17 62248559 - Exonic hg19 BRCA TCGA-GI-A2C8 5 Out-of-Frame Intra-chr q11.2 q23.3 Seq+ 661 ChimerSeq FusionScan TCGA_RNA-Seq THSD4-LRRC49 THSD4 chr15 71447271 + LRRC49 chr15 71329517 + Exonic hg19 BRCA TCGA-GI-A2C8 4 Out-of-Frame Intra-chr q23 q23 Seq+ 662 ChimerSeq FusionScan TCGA_RNA-Seq MAP2K4-CD79B MAP2K4 chr17 11924318 + CD79B chr17 62008748 - Exonic hg19 BRCA TCGA-GI-A2C8 3 In-Frame Intra-chr p12 STE:STE7 Oncogene Tumor suppressor gene q23.3 Oncogene Seq+ 663 ChimerSeq FusionScan TCGA_RNA-Seq PBX1-LRRC52 PBX1 chr1 164532548 + LRRC52 chr1 165532741 + Exonic hg19 BRCA TCGA-GI-A2C8 2 In-Frame Intra-chr q23.3 Oncogene Transcription factor q24.1 Seq+ 664 ChimerSeq FusionScan TCGA_RNA-Seq DAP-SNX9 DAP chr5 10748286 - SNX9 chr6 158327159 + Exonic hg19 BRCA TCGA-A8-A09X 4 In-Frame Inter-chr p15.2 q25.3 Seq+ 665 ChimerSeq FusionScan TCGA_RNA-Seq PXN-RABEP1 PXN chr12 120703419 - RABEP1 chr17 5276608 + Exonic hg19 BRCA TCGA-A8-A09X 2 Out-of-Frame Inter-chr q24.23 p13.2 666 ChimerSeq FusionScan TCGA_RNA-Seq ZMYM4-C15orf39 ZMYM4 chr1 35734686 + C15orf39 chr15 75498339 + Exonic hg19 BRCA TCGA-A1-A0SG 2 CDS-5'UTR Inter-chr p34.3 q24.2 667 ChimerSeq FusionScan TCGA_RNA-Seq TNFAIP1-POLDIP2 TNFAIP1 chr17 26669468 + POLDIP2 chr17 26676188 - Exonic hg19 BRCA TCGA-BH-A0DZ 2 In-Frame Intra-chr q11.2 q11.2 668 ChimerSeq FusionScan TCGA_RNA-Seq SGSH-EIF3D SGSH chr17 78187970 - EIF3D chr22 36912837 - Exonic hg19 BRCA TCGA-BH-A0DZ 2 In-Frame Inter-chr q25.3 q12.3 669 ChimerSeq FusionScan TCGA_RNA-Seq TIAM1-FBLIM1 TIAM1 chr21 32711557 - FBLIM1 chr1 16111042 + Exonic hg19 BRCA TCGA-AC-A3OD 3 5'UTR-CDS Inter-chr q22.11 p36.21 Seq+ 670 ChimerSeq FusionScan TCGA_RNA-Seq THOC7-LRIG1 THOC7 chr3 63849447 - LRIG1 chr3 66512933 - Exonic hg19 BRCA TCGA-AC-A3OD 3 Out-of-Frame Intra-chr p14.1 Tumor suppressor gene Seq+ 671 ChimerSeq FusionScan TCGA_RNA-Seq NEU3-NDUFV1 NEU3 chr11 74700199 + NDUFV1 chr11 67375866 + Exonic hg19 BRCA TCGA-AC-A3OD 3 Out-of-Frame Intra-chr q13.4 q13.2 Seq+ 672 ChimerSeq FusionScan TCGA_RNA-Seq LRP5-MEN1 LRP5 chr11 68080273 + MEN1 chr11 64572670 - Exonic hg19 BRCA TCGA-AC-A3OD 2 Out-of-Frame Intra-chr q13.2 q13.1 Oncogene Tumor suppressor gene 673 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-AC-A3OD 2 5'UTR-5'UTR Inter-chr p13.2 p22 674 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BRCA TCGA-C8-A134 3 Out-of-Frame Intra-chr q22.2 q22.2 675 ChimerSeq FusionScan TCGA_RNA-Seq ZFAND3-GRHL2 ZFAND3 chr6 37897775 + GRHL2 chr8 102676681 + Exonic hg19 BRCA TCGA-C8-A134 2 Out-of-Frame Inter-chr p21.2 q22.3 Transcription factor 676 ChimerSeq FusionScan TCGA_RNA-Seq SPAG9-SKAP1 SPAG9 chr17 49156944 - SKAP1 chr17 46266862 - Exonic hg19 BRCA TCGA-EW-A1OV 5 In-Frame Intra-chr q21.33 q21.32 Seq+ 677 ChimerSeq FusionScan TCGA_RNA-Seq UBE2D2-HINT1 UBE2D2 chr5 138994202 + HINT1 chr5 130495304 - Exonic hg19 BRCA TCGA-EW-A1OV 2 In-Frame Intra-chr q31.2 q23.3 Tumor suppressor gene 678 ChimerSeq FusionScan TCGA_RNA-Seq ALDOA-SOCS2 ALDOA chr16 30075826 + SOCS2 chr12 93966460 + Exonic hg19 BRCA TCGA-BH-A0DV 2 5'UTR-5'UTR Inter-chr p11.2 q22 679 ChimerSeq FusionScan TCGA_RNA-Seq UQCRC2-METTL9 UQCRC2 chr16 21969920 + METTL9 chr16 21629185 + Exonic hg19 BRCA TCGA-BH-A0BJ 2 In-Frame Intra-chr 680 ChimerSeq FusionScan TCGA_RNA-Seq NCOA4-SGMS1 NCOA4 chr10 51565296 + SGMS1 chr10 52087082 - Exonic hg19 BRCA TCGA-BH-A0BJ 2 5'UTR-CDS Intra-chr q11.22 Oncogene Tumor suppressor gene q11.23 Tumor suppressor gene 681 ChimerSeq FusionScan TCGA_RNA-Seq SYNE2-KIAA0391 SYNE2 chr14 64453335 + KIAA0391 chr14 35735932 + Exonic hg19 BRCA TCGA-A8-A079 5 In-Frame Intra-chr q23.2 q13.2 Seq+ 682 ChimerSeq FusionScan TCGA_RNA-Seq PHF20-RPN2 PHF20 chr20 34528969 + RPN2 chr20 35812582 + Exonic hg19 BRCA TCGA-A8-A079 5 In-Frame Intra-chr q11.22 Transcription factor q11.23 Seq+ 683 ChimerSeq FusionScan TCGA_RNA-Seq GALNT2-KIF26B GALNT2 chr1 230339036 + KIF26B chr1 245847534 + Exonic hg19 BRCA TCGA-A8-A079 3 In-Frame Intra-chr q42.13 Seq+ 684 ChimerSeq FusionScan TCGA_RNA-Seq SMEK1-FBXO34 SMEK1 chr14 91975849 - FBXO34 chr14 55817098 + Exonic hg19 BRCA TCGA-A8-A079 3 CDS-5'UTR Intra-chr q22.3 Seq+ 685 ChimerSeq FusionScan TCGA_RNA-Seq MBTD1-MYO7A MBTD1 chr17 49294694 - MYO7A chr11 76903095 + Exonic hg19 BRCA TCGA-A8-A079 2 In-Frame Inter-chr q21.33 q13.5 Seq+ 686 ChimerSeq FusionScan TCGA_RNA-Seq SMURF1-PDAP1 SMURF1 chr7 98741348 - PDAP1 chr7 98995636 - Exonic hg19 BRCA TCGA-BH-A0HU 3 Out-of-Frame Intra-chr q22.1 Seq+ 687 ChimerSeq FusionScan TCGA_RNA-Seq MICU1-ARHGAP22 MICU1 chr10 74167686 - ARHGAP22 chr10 49654662 - Exonic hg19 BRCA TCGA-BH-A0HU 2 Out-of-Frame Intra-chr q22.1 q11.23 Seq+ 688 ChimerSeq FusionScan TCGA_RNA-Seq SLC9A8-CCDC64B SLC9A8 chr20 48431726 + CCDC64B chr16 3081151 - Exonic hg19 BRCA TCGA-BH-A0H9 3 Out-of-Frame Inter-chr q13.13 Seq+ 689 ChimerSeq FusionScan TCGA_RNA-Seq NRG2-CYSTM1 NRG2 chr5 139421954 - CYSTM1 chr5 139622889 + Exonic hg19 BRCA TCGA-BH-A0H9 3 In-Frame Intra-chr q31.2 q31.3 Seq+ 690 ChimerSeq FusionScan TCGA_RNA-Seq UQCC-SAMHD1 UQCC chr20 33981894 - SAMHD1 chr20 35575207 - Exonic hg19 BRCA TCGA-BH-A0H9 3 Out-of-Frame Intra-chr q11.23 Seq+ 691 ChimerSeq FusionScan TCGA_RNA-Seq SOGA2-DLGAP1 SOGA2 chr18 8720494 + DLGAP1 chr18 3742512 - Exonic hg19 BRCA TCGA-BH-A0H9 2 Out-of-Frame Intra-chr p11.31 692 ChimerSeq FusionScan TCGA_RNA-Seq KDM6A-PDHX KDM6A chrX 44950109 + PDHX chr11 34952950 + Exonic hg19 BRCA TCGA-BH-A0BF 3 Out-of-Frame Inter-chr p11.3 Oncogene Tumor suppressor gene p13 Seq+ 693 ChimerSeq FusionScan TCGA_RNA-Seq COX20-SDCCAG8 COX20 chr1 245005560 + SDCCAG8 chr1 243504340 + Exonic hg19 BRCA TCGA-BH-A0BF 2 Out-of-Frame Intra-chr q44 Seq+ 694 ChimerSeq FusionScan TCGA_RNA-Seq PCMTD1-WRN PCMTD1 chr8 52811489 - WRN chr8 30998945 + Exonic hg19 BRCA TCGA-A8-A07P 5 5'UTR-CDS Intra-chr q11.23 p12 Oncogene Seq+ 695 ChimerSeq FusionScan TCGA_RNA-Seq USP22-MYH10 USP22 chr17 20919064 - MYH10 chr17 8508300 - Exonic hg19 BRCA TCGA-A8-A07P 2 Out-of-Frame Intra-chr p11.2 p13.1 Seq+ 696 ChimerSeq FusionScan TCGA_RNA-Seq WBP11-MGP WBP11 chr12 14946664 - MGP chr12 15037179 - Exonic hg19 BRCA TCGA-A2-A0D0 5 In-Frame Intra-chr p12.3 p12.3 Seq+ 697 ChimerSeq FusionScan TCGA_RNA-Seq LRP5-ALG1L LRP5 chr11 68115711 + ALG1L chr3 125653389 - Exonic hg19 BRCA TCGA-A2-A0D0 2 CDS-5'UTR Inter-chr q13.2 q21.2 698 ChimerSeq FusionScan TCGA_RNA-Seq SCARB2-STAU2 SCARB2 chr4 77116859 - STAU2 chr8 74495065 - Exonic hg19 BRCA TCGA-A2-A0D0 2 Out-of-Frame Inter-chr q21.1 q21.11 Seq+ 699 ChimerSeq FusionScan TCGA_RNA-Seq ERC1-RET ERC1 chr12 1250953 + RET chr10 43612031 + Exonic hg19 BRCA TCGA-C8-A1HJ 4 In-Frame Inter-chr q11.21 TK:Ret Oncogene KB Seq+ 700 ChimerSeq FusionScan TCGA_RNA-Seq NCOA7-TPD52L1 NCOA7 chr6 126211956 + TPD52L1 chr6 125569427 + Exonic hg19 BRCA TCGA-C8-A1HJ 2 In-Frame Intra-chr q22.31 q22.31 Seq+ 701 ChimerSeq FusionScan TCGA_RNA-Seq IST1-FAM133B IST1 chr16 71929492 + FAM133B chr7 92210917 - Exonic hg19 BRCA TCGA-B6-A0WX 2 5'UTR-5'UTR Inter-chr q22.2 q21.2 702 ChimerSeq FusionScan TCGA_RNA-Seq LLGL2-KIAA0146 LLGL2 chr17 73559887 + KIAA0146 chr8 48626050 + Exonic hg19 BRCA TCGA-B6-A0WX 2 Out-of-Frame Inter-chr q25.1 703 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-STAMBP RCC1 chr1 28832596 + STAMBP chr2 74086380 + Exonic hg19 BRCA TCGA-PL-A8LV 2 5'UTR-CDS Inter-chr p35.3 p13.1 704 ChimerSeq FusionScan TCGA_RNA-Seq CTTN-FOLR1 CTTN chr11 70244720 + FOLR1 chr11 71903209 + Exonic hg19 BRCA TCGA-E9-A228 15 5'UTR-5'UTR Intra-chr q13.3 q13.4 Seq+ 705 ChimerSeq FusionScan TCGA_RNA-Seq PGAP1-SPAG16 PGAP1 chr2 197781141 - SPAG16 chr2 215274863 + Exonic hg19 BRCA TCGA-E9-A228 6 Out-of-Frame Intra-chr q33.1 q34 Seq+ 706 ChimerSeq FusionScan TCGA_RNA-Seq CTTN-FOLR1 CTTN chr11 70244720 + FOLR1 chr11 71906314 + Exonic hg19 BRCA TCGA-E9-A228 6 5'UTR-CDS Intra-chr q13.3 q13.4 Seq+ 707 ChimerSeq FusionScan TCGA_RNA-Seq CTTN-FOLR1 CTTN chr11 70244720 + FOLR1 chr11 71901619 + Exonic hg19 BRCA TCGA-E9-A228 5 5'UTR-5'UTR Intra-chr q13.3 q13.4 Seq+ 708 ChimerSeq FusionScan TCGA_RNA-Seq LRTOMT-FOLR1 LRTOMT chr11 71791931 + FOLR1 chr11 71903209 + Exonic hg19 BRCA TCGA-E9-A228 4 5'UTR-5'UTR Intra-chr q13.4 q13.4 Seq+ 709 ChimerSeq FusionScan TCGA_RNA-Seq WIPF2-PSMD11 WIPF2 chr17 38430251 + PSMD11 chr17 30806268 + Exonic hg19 BRCA TCGA-E9-A228 3 Out-of-Frame Intra-chr q21.2 q11.2 Seq+ 710 ChimerSeq FusionScan TCGA_RNA-Seq TAOK1-FLOT2 TAOK1 chr17 27718042 + FLOT2 chr17 27216044 - Exonic hg19 BRCA TCGA-E9-A228 3 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 711 ChimerSeq FusionScan TCGA_RNA-Seq LRTOMT-FOLR1 LRTOMT chr11 71791931 + FOLR1 chr11 71901619 + Exonic hg19 BRCA TCGA-E9-A228 3 5'UTR-5'UTR Intra-chr q13.4 q13.4 Seq+ 712 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC17-SERINC2 ZCCHC17 chr1 31821821 + SERINC2 chr1 31883231 + Exonic hg19 BRCA TCGA-E9-A228 3 In-Frame Intra-chr p35.2 p35.2 713 ChimerSeq FusionScan TCGA_RNA-Seq ANO1-UNC5D ANO1 chr11 70017145 + UNC5D chr8 35406809 + Exonic hg19 BRCA TCGA-E9-A228 2 In-Frame Inter-chr q13.3 p12 Tumor suppressor gene Seq+ 714 ChimerSeq FusionScan TCGA_RNA-Seq NAA60-CLUAP1 NAA60 chr16 3508181 + CLUAP1 chr16 3562382 + Exonic hg19 BRCA TCGA-E9-A228 2 5'UTR-CDS Intra-chr p13.3 p13.3 715 ChimerSeq FusionScan TCGA_RNA-Seq MSI2-TEX2 MSI2 chr17 55339553 + TEX2 chr17 62291602 - Exonic hg19 BRCA TCGA-E9-A228 2 CDS-5'UTR Intra-chr q22 q23.3 Seq+ 716 ChimerSeq FusionScan TCGA_RNA-Seq SNX11-NPEPPS SNX11 chr17 46185200 + NPEPPS chr17 45623274 + Exonic hg19 BRCA TCGA-E9-A228 2 5'UTR-CDS Intra-chr q21.32 q21.32 717 ChimerSeq FusionScan TCGA_RNA-Seq ZNF79-FAM129B ZNF79 chr9 130198282 + FAM129B chr9 130269710 - Exonic hg19 BRCA TCGA-AO-A12G 5 In-Frame Intra-chr q33.3 Transcription factor q34.11 Seq+ 718 ChimerSeq FusionScan TCGA_RNA-Seq ARID5B-ABLIM1 ARID5B chr10 63700167 + ABLIM1 chr10 116201545 - Exonic hg19 BRCA TCGA-AO-A12G 4 In-Frame Intra-chr q21.2 Transcription factor q25.3 Seq+ 719 ChimerSeq FusionScan TCGA_RNA-Seq RAB27A-SQRDL RAB27A chr15 55562362 - SQRDL chr15 45968298 + Exonic hg19 BRCA TCGA-AO-A03P 4 5'UTR-CDS Intra-chr q21.3 Seq+ 720 ChimerSeq FusionScan TCGA_RNA-Seq ADK-TTC23 ADK chr10 75936644 + TTC23 chr15 99768937 - Exonic hg19 BRCA TCGA-AO-A03P 3 CDS-5'UTR Inter-chr q22.2 q26.3 Seq+ 721 ChimerSeq FusionScan TCGA_RNA-Seq RAB27A-SQRDL RAB27A chr15 55562362 - SQRDL chr15 45974675 + Exonic hg19 BRCA TCGA-AO-A03P 3 5'UTR-CDS Intra-chr q21.3 Seq+ 722 ChimerSeq FusionScan TCGA_RNA-Seq VPS37C-SLC3A2 VPS37C chr11 60928862 - SLC3A2 chr11 62651928 + Exonic hg19 BRCA TCGA-AO-A03P 3 5'UTR-5'UTR Intra-chr q12.2 q12.3 Seq+ 723 ChimerSeq FusionScan TCGA_RNA-Seq ZNF564-WIZ ZNF564 chr19 12662143 - WIZ chr19 15538344 - Exonic hg19 BRCA TCGA-AO-A03P 3 Out-of-Frame Intra-chr p13.2 Transcription factor p13.12 Transcription factor Seq+ 724 ChimerSeq FusionScan TCGA_RNA-Seq INPP5A-FAM149B1 INPP5A chr10 134563349 + FAM149B1 chr10 74999069 + Exonic hg19 BRCA TCGA-AO-A03P 2 In-Frame Intra-chr q26.3 q22.2 Seq+ 725 ChimerSeq FusionScan TCGA_RNA-Seq PBLD-LRRC28 PBLD chr10 70048239 - LRRC28 chr15 99796102 + Exonic hg19 BRCA TCGA-AO-A03P 2 CDS-5'UTR Inter-chr q21.3 q26.3 Seq+ 726 ChimerSeq FusionScan TCGA_RNA-Seq OSBPL2-PLD1 OSBPL2 chr20 60838747 + PLD1 chr3 171338310 - Exonic hg19 BRCA TCGA-AO-A03P 2 Out-of-Frame Inter-chr q13.33 q26.31 Tumor suppressor gene Seq+ 727 ChimerSeq FusionScan TCGA_RNA-Seq NARG2-CIB1 NARG2 chr15 60734614 - CIB1 chr15 90776935 - Exonic hg19 BRCA TCGA-AO-A03P 2 Out-of-Frame Intra-chr q26.1 Seq+ 728 ChimerSeq FusionScan TCGA_RNA-Seq ITSN1-CD276 ITSN1 chr21 35015019 + CD276 chr15 73991926 + Exonic hg19 BRCA TCGA-EW-A424 2 5'UTR-5'UTR Inter-chr q22.11 q24.1 729 ChimerSeq FusionScan TCGA_RNA-Seq UBE3D-SERPINB1 UBE3D chr6 83775360 - SERPINB1 chr6 2840828 - Exonic hg19 BRCA TCGA-EW-A424 2 CDS-5'UTR Intra-chr q14.1 p25.2 Seq+ 730 ChimerSeq FusionScan TCGA_RNA-Seq RPS19BP1-KCNE1 RPS19BP1 chr22 39928399 - KCNE1 chr21 35831034 - Exonic hg19 BRCA TCGA-EW-A424 2 CDS-5'UTR Inter-chr q13.1 q22.12 Seq+ 731 ChimerSeq FusionScan TCGA_RNA-Seq NAPG-PEPD NAPG chr18 10526155 + PEPD chr19 33904549 - Exonic hg19 BRCA TCGA-A2-A0CV 2 In-Frame Inter-chr p11.22 q13.11 732 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-A2-A0CV 2 5'UTR-5'UTR Inter-chr p13.2 p22 733 ChimerSeq FusionScan TCGA_RNA-Seq CTBP2-RAB18 CTBP2 chr10 126848887 - RAB18 chr10 27798803 + Exonic hg19 BRCA TCGA-A2-A0CV 2 5'UTR-5'UTR Intra-chr q26.13 p12.1 734 ChimerSeq FusionScan TCGA_RNA-Seq DNASE2-TRMT1 DNASE2 chr19 12989195 - TRMT1 chr19 13216210 - Exonic hg19 BRCA TCGA-AC-A8OQ 2 Out-of-Frame Intra-chr p13.13 p13.13 Seq+ 735 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-PGAP3 GRB7 chr17 37894645 + PGAP3 chr17 37830932 - Exonic hg19 BRCA TCGA-A8-A09I 7 5'UTR-CDS Intra-chr q12 q12 Oncogene Seq+ 736 ChimerSeq FusionScan TCGA_RNA-Seq AXIN1-ITFG3 AXIN1 chr16 402368 - ITFG3 chr16 299547 + Exonic hg19 BRCA TCGA-A8-A09I 4 5'UTR-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene Seq+ 737 ChimerSeq FusionScan TCGA_RNA-Seq C17orf75-TOP2A C17orf75 chr17 30662341 - TOP2A chr17 38569877 - Exonic hg19 BRCA TCGA-A8-A09I 4 Out-of-Frame Intra-chr q11.2 q21.2 Seq+ 738 ChimerSeq FusionScan TCGA_RNA-Seq RARA-MYO1D RARA chr17 38487648 + MYO1D chr17 31107802 - Exonic hg19 BRCA TCGA-A8-A09I 4 Out-of-Frame Intra-chr q21.2 Oncogene Transcription factor q11.2 Seq+ 739 ChimerSeq FusionScan TCGA_RNA-Seq NF1-NLE1 NF1 chr17 29497015 + NLE1 chr17 33464212 - Exonic hg19 BRCA TCGA-A8-A09I 3 Out-of-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q12 Seq+ 740 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57886156 + Exonic hg19 BRCA TCGA-A8-A09I 3 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 741 ChimerSeq FusionScan TCGA_RNA-Seq AKAP1-WIPF2 AKAP1 chr17 55162759 + WIPF2 chr17 38412642 + Exonic hg19 BRCA TCGA-A8-A09I 2 5'UTR-5'UTR Intra-chr q22 q21.2 Seq+ 742 ChimerSeq FusionScan TCGA_RNA-Seq FBXL20-IKZF3 FBXL20 chr17 37557613 - IKZF3 chr17 37988404 - Exonic hg19 BRCA TCGA-A8-A09I 2 Out-of-Frame Intra-chr q12 q21.1 Tumor suppressor gene Transcription factor Seq+ 743 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-A8-A09I 2 5'UTR-5'UTR Inter-chr p13.2 p22 744 ChimerSeq FusionScan TCGA_RNA-Seq MED1-GDPD1 MED1 chr17 37579579 - GDPD1 chr17 57335111 + Exonic hg19 BRCA TCGA-A8-A09I 2 In-Frame Intra-chr q12 Tumor suppressor gene q22 Seq+ 745 ChimerSeq FusionScan TCGA_RNA-Seq WIPF2-EZH1 WIPF2 chr17 38421398 + EZH1 chr17 40882936 - Exonic hg19 BRCA TCGA-A8-A09I 2 CDS-5'UTR Intra-chr q21.2 q21.2 Tumor suppressor gene Seq+ 746 ChimerSeq FusionScan TCGA_RNA-Seq NSL1-CHCHD3 NSL1 chr1 212955713 - CHCHD3 chr7 132481338 - Exonic hg19 BRCA TCGA-A8-A09I 2 Out-of-Frame Inter-chr q32.3 q33 Transcription factor 747 ChimerSeq FusionScan TCGA_RNA-Seq ZNF184-CD2AP ZNF184 chr6 27435631 - CD2AP chr6 47501337 + Exonic hg19 BRCA TCGA-AO-A0JG 4 In-Frame Intra-chr p22.1 Transcription factor p12.3 Seq+ 748 ChimerSeq FusionScan TCGA_RNA-Seq FOXK2-SKAP1 FOXK2 chr17 80545148 + SKAP1 chr17 46474147 - Exonic hg19 BRCA TCGA-AO-A0JG 4 In-Frame Intra-chr q25.3 Transcription factor q21.32 Seq+ 749 ChimerSeq FusionScan TCGA_RNA-Seq YPEL2-UBE2Z YPEL2 chr17 57409185 + UBE2Z chr17 46993437 + Exonic hg19 BRCA TCGA-AO-A0JG 2 5'UTR-CDS Intra-chr q22 q21.32 Seq+ 750 ChimerSeq FusionScan TCGA_RNA-Seq SKAP1-TMEM100 SKAP1 chr17 46423266 - TMEM100 chr17 53805343 - Exonic hg19 BRCA TCGA-AO-A0JG 2 CDS-5'UTR Intra-chr q21.32 q22 Seq+ 751 ChimerSeq FusionScan TCGA_RNA-Seq YPEL2-ATP5G1 YPEL2 chr17 57409185 + ATP5G1 chr17 46970770 + Exonic hg19 BRCA TCGA-AO-A0JG 2 5'UTR-5'UTR Intra-chr q22 q21.32 Seq+ 752 ChimerSeq FusionScan TCGA_RNA-Seq SOX6-GALNTL4 SOX6 chr11 16339991 - GALNTL4 chr11 11400811 - Exonic hg19 BRCA TCGA-AR-A24Q 2 In-Frame Intra-chr p15.2 Transcription factor Seq+ 753 ChimerSeq FusionScan TCGA_RNA-Seq PACSIN2-CYB5R3 PACSIN2 chr22 43411026 - CYB5R3 chr22 43032852 - Exonic hg19 BRCA TCGA-OL-A66I 4 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 754 ChimerSeq FusionScan TCGA_RNA-Seq CREBBP-ZNF500 CREBBP chr16 3929832 - ZNF500 chr16 4803059 - Exonic hg19 BRCA TCGA-OL-A66I 2 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Transcription factor Seq+ 755 ChimerSeq FusionScan TCGA_RNA-Seq PPP3CA-MEIS2 PPP3CA chr4 102267895 - MEIS2 chr15 37329160 - Exonic hg19 BRCA TCGA-OL-A66I 2 In-Frame Inter-chr q24 q14 Transcription factor 756 ChimerSeq FusionScan TCGA_RNA-Seq DAP3-RAB25 DAP3 chr1 155658965 + RAB25 chr1 156038060 + Exonic hg19 BRCA TCGA-OL-A66I 2 5'UTR-CDS Intra-chr q22 q22 Tumor suppressor gene 757 ChimerSeq FusionScan TCGA_RNA-Seq MARK2-GLYATL2 MARK2 chr11 63607032 + GLYATL2 chr11 58611997 - Exonic hg19 BRCA TCGA-A2-A1G4 7 CDS-5'UTR Intra-chr q13.1 CAMK:CAMKL q12.1 Seq+ 758 ChimerSeq FusionScan TCGA_RNA-Seq RNF121-VPS37C RNF121 chr11 71671937 + VPS37C chr11 60901679 - Exonic hg19 BRCA TCGA-A2-A1G4 5 In-Frame Intra-chr q13.4 q12.2 Seq+ 759 ChimerSeq FusionScan TCGA_RNA-Seq PPFIA1-MARK2 PPFIA1 chr11 70118542 + MARK2 chr11 63662630 + Exonic hg19 BRCA TCGA-A2-A1G4 3 In-Frame Intra-chr q13.3 q13.1 CAMK:CAMKL Seq+ 760 ChimerSeq FusionScan TCGA_RNA-Seq MARK2-GLYATL2 MARK2 chr11 63607032 + GLYATL2 chr11 58607125 - Exonic hg19 BRCA TCGA-A2-A1G4 2 CDS-5'UTR Intra-chr q13.1 CAMK:CAMKL q12.1 Seq+ 761 ChimerSeq FusionScan TCGA_RNA-Seq USP22-MMS22L USP22 chr17 20945977 - MMS22L chr6 97726774 - Exonic hg19 BRCA TCGA-A8-A097 4 Out-of-Frame Inter-chr p11.2 q16.1 Seq+ 762 ChimerSeq FusionScan TCGA_RNA-Seq TRAM1-ZFPM2 TRAM1 chr8 71506740 - ZFPM2 chr8 106646473 + Exonic hg19 BRCA TCGA-A8-A097 3 In-Frame Intra-chr q13.3 q22.3 Transcription factor Seq+ 763 ChimerSeq FusionScan TCGA_RNA-Seq VCAN-EDIL3 VCAN chr5 82850857 + EDIL3 chr5 83402648 - Exonic hg19 BRCA TCGA-A8-A097 2 Out-of-Frame Intra-chr q14.2 q14.3 Seq+ 764 ChimerSeq FusionScan TCGA_RNA-Seq MCM9-GJA1 MCM9 chr6 119232814 - GJA1 chr6 121767977 + Exonic hg19 BRCA TCGA-BH-A0DE 2 CDS-5'UTR Intra-chr q22.31 Tumor suppressor gene q22.31 Tumor suppressor gene 765 ChimerSeq FusionScan TCGA_RNA-Seq NOL3-UBE2D2 NOL3 chr16 67204477 + UBE2D2 chr5 138979956 + Exonic hg19 BRCA TCGA-BH-A0DE 2 5'UTR-5'UTR Inter-chr q22.1 q31.2 Seq+ 766 ChimerSeq FusionScan TCGA_RNA-Seq ADAMTS10-MLLT1 ADAMTS10 chr19 8665811 - MLLT1 chr19 6270770 - Exonic hg19 BRCA TCGA-AC-A2B8 2 In-Frame Intra-chr p13.2 p13.3 Seq+ 767 ChimerSeq FusionScan TCGA_RNA-Seq KANSL1-ORMDL3 KANSL1 chr17 44144914 - ORMDL3 chr17 38080478 - Exonic hg19 BRCA TCGA-AC-A23H 8 CDS-5'UTR Intra-chr q21.1 Seq+ 768 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R4-NUP188 PPP2R4 chr9 131891389 + NUP188 chr9 131730784 + Exonic hg19 BRCA TCGA-AC-A23H 7 In-Frame Intra-chr Tumor suppressor gene q34.11 Seq+ 769 ChimerSeq FusionScan TCGA_RNA-Seq UBR7-BTBD7 UBR7 chr14 93686757 + BTBD7 chr14 93723701 - Exonic hg19 BRCA TCGA-AC-A23H 2 In-Frame Intra-chr Seq+ 770 ChimerSeq FusionScan TCGA_RNA-Seq C8orf76-NKAIN3 C8orf76 chr8 124238739 - NKAIN3 chr8 63492097 + Exonic hg19 BRCA TCGA-AO-A0J4 2 In-Frame Intra-chr q24.13 q12.3 Seq+ 771 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-AC-A23E 2 5'UTR-5'UTR Inter-chr p13.2 p22 772 ChimerSeq FusionScan TCGA_RNA-Seq GK5-MBNL1 GK5 chr3 141932367 - MBNL1 chr3 152132729 + Exonic hg19 BRCA TCGA-A2-A0CL 3 Out-of-Frame Intra-chr q23 q25.1 Seq+ 773 ChimerSeq FusionScan TCGA_RNA-Seq TNRC6B-SGSM3 TNRC6B chr22 40521866 + SGSM3 chr22 40796699 + Exonic hg19 BRCA TCGA-A2-A0CL 3 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 774 ChimerSeq FusionScan TCGA_RNA-Seq ARID1A-THBS3 ARID1A chr1 27059283 + THBS3 chr1 155172928 - Exonic hg19 BRCA TCGA-C8-A12V 3 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene q22 Seq+ 775 ChimerSeq FusionScan TCGA_RNA-Seq UBXN4-R3HDM1 UBXN4 chr2 136533921 + R3HDM1 chr2 136437742 + Exonic hg19 BRCA TCGA-A7-A6VY 2 In-Frame Intra-chr q21.3 q21.3 Seq+ 776 ChimerSeq FusionScan TCGA_RNA-Seq SMAP2-FBXO42 SMAP2 chr1 40839895 + FBXO42 chr1 16583254 - Exonic hg19 BRCA TCGA-A7-A6VY 2 In-Frame Intra-chr p34.2 p36.13 Seq+ 777 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BRCA TCGA-A7-A6VY 2 Out-of-Frame Intra-chr q22.2 q22.2 778 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R2B-CCDC91 PPP2R2B chr5 146257564 - CCDC91 chr12 28544236 + Exonic hg19 BRCA TCGA-AO-A0JC 2 Out-of-Frame Inter-chr q32 p11.22 Seq+ 779 ChimerSeq FusionScan TCGA_RNA-Seq TLK2-SND1 TLK2 chr17 60558567 + SND1 chr7 127630999 + Exonic hg19 BRCA TCGA-D8-A27F 6 Out-of-Frame Inter-chr q23.2 Other:TLK q32.1 780 ChimerSeq FusionScan TCGA_RNA-Seq LAMA5-UBN1 LAMA5 chr20 60937455 - UBN1 chr16 4918833 + Exonic hg19 BRCA TCGA-D8-A27F 3 In-Frame Inter-chr q13.33 p13.3 Seq+ 781 ChimerSeq FusionScan TCGA_RNA-Seq VPS37A-LPL VPS37A chr8 17126465 + LPL chr8 19805690 + Exonic hg19 BRCA TCGA-D8-A27F 2 Out-of-Frame Intra-chr p22 p21.3 782 ChimerSeq FusionScan TCGA_RNA-Seq MSI2-PCTP MSI2 chr17 55339553 + PCTP chr17 53844695 + Exonic hg19 BRCA TCGA-D8-A27F 2 In-Frame Intra-chr q22 q22 Seq+ 783 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0141-RNF14 KIAA0141 chr5 141314151 + RNF14 chr5 141367297 + Exonic hg19 BRCA TCGA-E2-A154 2 Out-of-Frame Intra-chr q31.3 q31.3 784 ChimerSeq FusionScan TCGA_RNA-Seq SSH1-ATG10 SSH1 chr12 109198831 - ATG10 chr5 81283377 + Exonic hg19 BRCA TCGA-E2-A154 2 CDS-5'UTR Inter-chr q24.11 q14.1 785 ChimerSeq FusionScan TCGA_RNA-Seq BOLA2-BCAR4 BOLA2 chr16 30204678 - BCAR4 chr16 11914154 - Exonic hg19 BRCA TCGA-BH-A0C1 2 CDS-3'UTR Intra-chr p11.2 p13.13 786 ChimerSeq FusionScan TCGA_RNA-Seq CARHSP1-CPPED1 CARHSP1 chr16 8962822 - CPPED1 chr16 12875260 - Exonic hg19 BRCA TCGA-A7-A0CG 3 5'UTR-CDS Intra-chr p13.2 p13.12 787 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-A7-A0CG 3 5'UTR-5'UTR Inter-chr p13.2 p22 788 ChimerSeq FusionScan TCGA_RNA-Seq USP22-SLC39A11 USP22 chr17 20945977 - SLC39A11 chr17 70732858 - Exonic hg19 BRCA TCGA-D8-A27N 6 Out-of-Frame Intra-chr p11.2 q25.1 Seq+ 789 ChimerSeq FusionScan TCGA_RNA-Seq TANC2-PHB TANC2 chr17 61086987 + PHB chr17 47490653 - Exonic hg19 BRCA TCGA-D8-A27N 5 CDS-5'UTR Intra-chr q23.2 q21.33 Tumor suppressor gene Seq+ 790 ChimerSeq FusionScan TCGA_RNA-Seq PRKCI-TNIK PRKCI chr3 169953139 + TNIK chr3 170912424 - Exonic hg19 BRCA TCGA-D8-A27N 2 Out-of-Frame Intra-chr q26.2 q26.31 STE:STE20 Seq+ 791 ChimerSeq FusionScan TCGA_RNA-Seq STXBP4-TOM1L1 STXBP4 chr17 53046176 + TOM1L1 chr17 53024621 + Exonic hg19 BRCA TCGA-D8-A27N 2 5'UTR-CDS Intra-chr q22 q22 792 ChimerSeq FusionScan TCGA_RNA-Seq MSI2-TEX2 MSI2 chr17 55607085 + TEX2 chr17 62272455 - Exonic hg19 BRCA TCGA-D8-A27N 2 Out-of-Frame Intra-chr q22 q23.3 Seq+ 793 ChimerSeq FusionScan TCGA_RNA-Seq VPS13B-WAPAL VPS13B chr8 100874174 + WAPAL chr10 88260500 - Exonic hg19 BRCA TCGA-D8-A27N 2 In-Frame Inter-chr q22.2 794 ChimerSeq FusionScan TCGA_RNA-Seq ZMYM4-UTP11L ZMYM4 chr1 35791006 + UTP11L chr1 38488370 + Exonic hg19 BRCA TCGA-AR-A2LR 4 Out-of-Frame Intra-chr p34.3 Seq+ 795 ChimerSeq FusionScan TCGA_RNA-Seq UAP1-BCL9 UAP1 chr1 162536138 + BCL9 chr1 147090621 + Exonic hg19 BRCA TCGA-AR-A2LR 4 Out-of-Frame Intra-chr q23.3 q21.2 Oncogene Seq+ 796 ChimerSeq FusionScan TCGA_RNA-Seq OGFOD1-NUP93 OGFOD1 chr16 56487320 + NUP93 chr16 56852575 + Exonic hg19 BRCA TCGA-AR-A2LR 3 In-Frame Intra-chr q13 q13 Seq+ 797 ChimerSeq FusionScan TCGA_RNA-Seq CLCN3-UBE2D3 CLCN3 chr4 170557239 + UBE2D3 chr4 103731012 - Exonic hg19 BRCA TCGA-AR-A2LR 3 Out-of-Frame Intra-chr q33 q24 Seq+ 798 ChimerSeq FusionScan TCGA_RNA-Seq GALNT2-PRKCQ GALNT2 chr1 230203153 + PRKCQ chr10 6506366 - Exonic hg19 BRCA TCGA-AR-A2LR 2 In-Frame Inter-chr q42.13 p15.1 Seq+ 799 ChimerSeq FusionScan TCGA_RNA-Seq SMARCA4-LDLR SMARCA4 chr19 11123788 + LDLR chr19 11215895 + Exonic hg19 BRCA TCGA-AR-A2LR 2 Out-of-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 800 ChimerSeq FusionScan TCGA_RNA-Seq AGAP1-ZC2HC1A AGAP1 chr2 236403493 + ZC2HC1A chr8 79627455 + Exonic hg19 BRCA TCGA-AR-A2LR 2 Out-of-Frame Inter-chr q37.2 q21.13 Seq+ 801 ChimerSeq FusionScan TCGA_RNA-Seq PIP4K2B-MED24 PIP4K2B chr17 36933939 - MED24 chr17 38188343 - Exonic hg19 BRCA TCGA-A7-A4SF 5 In-Frame Intra-chr q12 q21.1 Seq+ 802 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R13B-CCDC88C PPP1R13B chr14 104219336 - CCDC88C chr14 91745650 - Exonic hg19 BRCA TCGA-A7-A4SF 2 Out-of-Frame Intra-chr q32.33 q32.12 Seq+ 803 ChimerSeq FusionScan TCGA_RNA-Seq CNOT2-SLC45A4 CNOT2 chr12 70713144 + SLC45A4 chr8 142231864 - Exonic hg19 BRCA TCGA-A7-A4SF 2 In-Frame Inter-chr q15 q24.3 Seq+ 804 ChimerSeq FusionScan TCGA_RNA-Seq LLPH-ADK LLPH chr12 66522675 - ADK chr10 76349039 + Exonic hg19 BRCA TCGA-E2-A10C 3 Out-of-Frame Inter-chr q14.3 q22.2 Seq+ 805 ChimerSeq FusionScan TCGA_RNA-Seq AHNAK-RPS6KA4 AHNAK chr11 62259203 - RPS6KA4 chr11 64132772 + Exonic hg19 BRCA TCGA-A8-A09E 3 Out-of-Frame Intra-chr q12.3 Tumor suppressor gene q13.1 Seq+ 806 ChimerSeq FusionScan TCGA_RNA-Seq TRIM11-SLC2A5 TRIM11 chr1 228588664 - SLC2A5 chr1 9098988 - Exonic hg19 BRCA TCGA-A8-A09E 2 In-Frame Intra-chr q42.13 p36.23 Seq+ 807 ChimerSeq FusionScan TCGA_RNA-Seq STC2-AP1G1 STC2 chr5 172750221 - AP1G1 chr16 71773244 - Exonic hg19 BRCA TCGA-A8-A09E 2 Out-of-Frame Inter-chr q35.2 q22.2 Seq+ 808 ChimerSeq FusionScan TCGA_RNA-Seq SDHAF2-C11orf85 SDHAF2 chr11 61205585 + C11orf85 chr11 64727609 - Exonic hg19 BRCA TCGA-EW-A1IW 2 CDS-5'UTR Intra-chr q12.2 Seq+ 809 ChimerSeq FusionScan TCGA_RNA-Seq ATG2A-NRXN2 ATG2A chr11 64669433 - NRXN2 chr11 64481415 - Exonic hg19 BRCA TCGA-EW-A1IW 2 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 810 ChimerSeq FusionScan TCGA_RNA-Seq ORC6-VPS35 ORC6 chr16 46725032 + VPS35 chr16 46717518 - Exonic hg19 BRCA TCGA-E9-A22H 3 In-Frame Intra-chr q11.2 q11.2 Seq+ 811 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-E9-A22H 2 5'UTR-5'UTR Inter-chr p13.2 p22 812 ChimerSeq FusionScan TCGA_RNA-Seq FAM192A-C16orf62 FAM192A chr16 57219732 - C16orf62 chr16 19663297 + Exonic hg19 BRCA TCGA-BH-A0RX 2 5'UTR-CDS Intra-chr q13 p12.3 Seq+ 813 ChimerSeq FusionScan TCGA_RNA-Seq TMEM161A-PCDH1 TMEM161A chr19 19249234 - PCDH1 chr5 141248996 - Exonic hg19 BRCA TCGA-B6-A0WY 2 Out-of-Frame Inter-chr p13.11 q31.3 814 ChimerSeq FusionScan TCGA_RNA-Seq CD44-PDHX CD44 chr11 35211612 + PDHX chr11 34952950 + Exonic hg19 BRCA TCGA-B6-A0WY 2 In-Frame Intra-chr p13 Oncogene Tumor suppressor gene p13 Seq+ 815 ChimerSeq FusionScan TCGA_RNA-Seq S1PR2-OLFM2 S1PR2 chr19 10341879 - OLFM2 chr19 9971470 - Exonic hg19 BRCA TCGA-B6-A0WY 2 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 816 ChimerSeq FusionScan TCGA_RNA-Seq ASAP1-CLVS1 ASAP1 chr8 131370262 - CLVS1 chr8 62366699 + Exonic hg19 BRCA TCGA-C8-A27A 6 In-Frame Intra-chr q24.22 q12.2 Seq+ 817 ChimerSeq FusionScan TCGA_RNA-Seq SKIV2L2-CETN3 SKIV2L2 chr5 54662703 + CETN3 chr5 89689924 - Exonic hg19 BRCA TCGA-C8-A27A 4 In-Frame Intra-chr q11.2 q14.3 Seq+ 818 ChimerSeq FusionScan TCGA_RNA-Seq ASAP1-CLVS1 ASAP1 chr8 131414130 - CLVS1 chr8 62366699 + Exonic hg19 BRCA TCGA-C8-A27A 2 Out-of-Frame Intra-chr q24.22 q12.2 Seq+ 819 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BRCA TCGA-C8-A27A 2 Out-of-Frame Intra-chr q22.2 q22.2 820 ChimerSeq FusionScan TCGA_RNA-Seq PHKB-PTPRR PHKB chr16 47549512 + PTPRR chr12 71033057 - Exonic hg19 BRCA TCGA-BH-A1EW 2 Out-of-Frame Inter-chr q12.1 q15 Seq+ 821 ChimerSeq FusionScan TCGA_RNA-Seq NF2-GRAP2 NF2 chr22 30035201 + GRAP2 chr22 40351822 + Exonic hg19 BRCA TCGA-A2-A0SV 3 In-Frame Intra-chr q12.2 Oncogene Tumor suppressor gene q13.1 Seq+ 822 ChimerSeq FusionScan TCGA_RNA-Seq CAST-FAM172A CAST chr5 96031611 + FAM172A chr5 93300228 - Exonic hg19 BRCA TCGA-A2-A0SV 2 In-Frame Intra-chr q15 q15 Tumor suppressor gene Seq+ 823 ChimerSeq FusionScan TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61574409 - ANK3 chr10 61789584 - Exonic hg19 BRCA TCGA-EW-A1P4 3 CDS-3'UTR Intra-chr q21.2 q21.2 Seq+ 824 ChimerSeq FusionScan TCGA_RNA-Seq MEX3D-DCTN6 MEX3D chr19 1567462 - DCTN6 chr8 30032600 + Exonic hg19 BRCA TCGA-EW-A1P4 3 In-Frame Inter-chr p13.3 p12 Seq+ 825 ChimerSeq FusionScan TCGA_RNA-Seq TFDP2-PLD1 TFDP2 chr3 141747420 - PLD1 chr3 171455872 - Exonic hg19 BRCA TCGA-EW-A1P4 2 5'UTR-5'UTR Intra-chr q23 Transcription factor q26.31 Tumor suppressor gene Seq+ 826 ChimerSeq FusionScan TCGA_RNA-Seq XRCC6-GPX5 XRCC6 chr22 42018090 + GPX5 chr6 28500097 + Exonic hg19 BRCA TCGA-A7-A0DA 5 In-Frame Inter-chr q13.2 Seq+ 827 ChimerSeq FusionScan TCGA_RNA-Seq AGAP1-RINT1 AGAP1 chr2 236792093 + RINT1 chr7 105204179 + Exonic hg19 BRCA TCGA-A7-A0DA 2 In-Frame Inter-chr q37.2 q22.3 Tumor suppressor gene Seq+ 828 ChimerSeq FusionScan TCGA_RNA-Seq ADAM10-FIZ1 ADAM10 chr15 58957295 - FIZ1 chr19 56109267 - Exonic hg19 BRCA TCGA-A7-A0DA 2 3'UTR-5'UTR Inter-chr q21.3 q13.42 Transcription factor Seq+ 829 ChimerSeq FusionScan TCGA_RNA-Seq USP33-TARS USP33 chr1 78225327 - TARS chr5 33445429 + Exonic hg19 BRCA TCGA-A7-A0DA 2 5'UTR-CDS Inter-chr p31.1 Tumor suppressor gene p13.3 Seq+ 830 ChimerSeq FusionScan TCGA_RNA-Seq SLC16A9-ADK SLC16A9 chr10 61469236 - ADK chr10 76468078 + Exonic hg19 BRCA TCGA-AR-A24L 6 5'UTR-CDS Intra-chr q21.2 q22.2 Seq+ 831 ChimerSeq FusionScan TCGA_RNA-Seq ARAP1-INTS5 ARAP1 chr11 72463372 - INTS5 chr11 62417471 - Exonic hg19 BRCA TCGA-AR-A24L 3 5'UTR-CDS Intra-chr q13.4 q12.3 Seq+ 832 ChimerSeq FusionScan TCGA_RNA-Seq PDSS2-CDYL2 PDSS2 chr6 107780193 - CDYL2 chr16 80654832 - Exonic hg19 BRCA TCGA-AR-A24L 2 Out-of-Frame Inter-chr q21 Tumor suppressor gene q23.2 833 ChimerSeq FusionScan TCGA_RNA-Seq LMBR1-PTPRN2 LMBR1 chr7 156589082 - PTPRN2 chr7 157341713 - Exonic hg19 BRCA TCGA-A2-A0D2 5 Out-of-Frame Intra-chr q36.3 q36.3 Seq+ 834 ChimerSeq FusionScan TCGA_RNA-Seq LNPEP-CAST LNPEP chr5 96271878 + CAST chr5 96011242 + Exonic hg19 BRCA TCGA-A2-A0D2 3 Out-of-Frame Intra-chr q15 q15 Seq+ 835 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BRCA TCGA-A2-A0D2 2 Out-of-Frame Intra-chr q22.2 q22.2 836 ChimerSeq FusionScan TCGA_RNA-Seq ELP2-MAPRE2 ELP2 chr18 33734962 + MAPRE2 chr18 32681909 + Exonic hg19 BRCA TCGA-A2-A0D2 2 In-Frame Intra-chr q12.2 q12.1 Seq+ 837 ChimerSeq FusionScan TCGA_RNA-Seq ZNF77-LPCAT2 ZNF77 chr19 2944835 - LPCAT2 chr16 55559419 + Exonic hg19 BRCA TCGA-D8-A1XL 2 In-Frame Inter-chr p13.3 Transcription factor q12.2 Seq+ 838 ChimerSeq FusionScan TCGA_RNA-Seq ZFC3H1-CCT2 ZFC3H1 chr12 72017139 - CCT2 chr12 69983264 + Exonic hg19 BRCA TCGA-D8-A1XL 2 Out-of-Frame Intra-chr q21.1 q15 839 ChimerSeq FusionScan TCGA_RNA-Seq FRAS1-FAM190A FRAS1 chr4 78987170 + FAM190A chr4 92519722 + Exonic hg19 BRCA TCGA-D8-A1JA 3 In-Frame Intra-chr q21.21 Seq+ 840 ChimerSeq FusionScan TCGA_RNA-Seq LLGL2-CA10 LLGL2 chr17 73521906 + CA10 chr17 50008492 - Exonic hg19 BRCA TCGA-D8-A1JA 2 5'UTR-CDS Intra-chr q25.1 q22 Seq+ 841 ChimerSeq FusionScan TCGA_RNA-Seq UAP1-TSHZ2 UAP1 chr1 162551249 + TSHZ2 chr20 52103682 + Exonic hg19 BRCA TCGA-E9-A22D 8 CDS-3'UTR Inter-chr q23.3 q13.2 Transcription factor Seq+ 842 ChimerSeq FusionScan TCGA_RNA-Seq XPO1-HORMAD1 XPO1 chr2 61725807 - HORMAD1 chr1 150692014 - Exonic hg19 BRCA TCGA-E9-A22D 4 CDS-5'UTR Inter-chr p15 Oncogene q21.3 Seq+ 843 ChimerSeq FusionScan TCGA_RNA-Seq PHLDA3-MYBPH PHLDA3 chr1 201437468 - MYBPH chr1 203139578 - Exonic hg19 BRCA TCGA-E9-A22D 4 3'UTR-CDS Intra-chr q32.1 Tumor suppressor gene q32.1 Seq+ 844 ChimerSeq FusionScan TCGA_RNA-Seq CCDC90B-PLXDC1 CCDC90B chr11 82984689 - PLXDC1 chr17 37265644 - Exonic hg19 BRCA TCGA-E9-A22D 4 In-Frame Inter-chr q14.1 q12 Seq+ 845 ChimerSeq FusionScan TCGA_RNA-Seq BPTF-RGS9 BPTF chr17 65850878 + RGS9 chr17 63164317 + Exonic hg19 BRCA TCGA-E9-A22D 4 In-Frame Intra-chr q24.2 Transcription factor q24.1 Seq+ 846 ChimerSeq FusionScan TCGA_RNA-Seq BPTF-RGS9 BPTF chr17 65850878 + RGS9 chr17 63173849 + Exonic hg19 BRCA TCGA-E9-A22D 4 Out-of-Frame Intra-chr q24.2 Transcription factor q24.1 Seq+ 847 ChimerSeq FusionScan TCGA_RNA-Seq TTC13-JAK2 TTC13 chr1 231075131 - JAK2 chr9 5064882 + Exonic hg19 BRCA TCGA-E9-A22D 3 In-Frame Inter-chr q42.2 p24.1 TK:JakA Oncogene Seq+ 848 ChimerSeq FusionScan TCGA_RNA-Seq ATF6-SERINC3 ATF6 chr1 161833102 + SERINC3 chr20 43129941 - Exonic hg19 BRCA TCGA-E9-A22D 3 Out-of-Frame Inter-chr q23.3 Transcription factor q13.12 Seq+ 849 ChimerSeq FusionScan TCGA_RNA-Seq EFHA1-ATP8A2 EFHA1 chr13 22178077 - ATP8A2 chr13 26402255 + Exonic hg19 BRCA TCGA-E9-A22D 2 In-Frame Intra-chr q12.13 Seq+ 850 ChimerSeq FusionScan TCGA_RNA-Seq UFC1-ANO1 UFC1 chr1 161123910 + ANO1 chr11 70013347 + Exonic hg19 BRCA TCGA-E9-A22D 2 Out-of-Frame Inter-chr q23.3 q13.3 Seq+ 851 ChimerSeq FusionScan TCGA_RNA-Seq PBX1-DHX40 PBX1 chr1 164532548 + DHX40 chr17 57679882 + Exonic hg19 BRCA TCGA-E9-A22D 2 Out-of-Frame Inter-chr q23.3 Oncogene Transcription factor q23.1 Seq+ 852 ChimerSeq FusionScan TCGA_RNA-Seq C6orf62-KIAA0319 C6orf62 chr6 24709004 - KIAA0319 chr6 24601436 - Exonic hg19 BRCA TCGA-AR-A1AR 2 CDS-5'UTR Intra-chr p22.3 p22.3 Seq+ 853 ChimerSeq FusionScan TCGA_RNA-Seq FUBP1-SLC44A5 FUBP1 chr1 78444568 - SLC44A5 chr1 75766370 - Exonic hg19 BRCA TCGA-AR-A1AR 2 Out-of-Frame Intra-chr p31.1 Oncogene p31.1 Seq+ 854 ChimerSeq FusionScan TCGA_RNA-Seq GNA12-ADSS GNA12 chr7 2834561 - ADSS chr1 244601070 - Exonic hg19 BRCA TCGA-E9-A1N6 4 CDS-5'UTR Inter-chr p22.2 q44 Seq+ 855 ChimerSeq FusionScan TCGA_RNA-Seq LGMN-SNX6 LGMN chr14 93176016 - SNX6 chr14 35078948 - Exonic hg19 BRCA TCGA-E9-A1N6 2 In-Frame Intra-chr q32.12 q13.1 856 ChimerSeq FusionScan TCGA_RNA-Seq DANCR-RHOA DANCR chr4 53579126 + RHOA chr3 49413024 - Exonic hg19 BRCA TCGA-E9-A1N6 2 5'UTR-5'UTR Inter-chr q12 p21.31 Oncogene Tumor suppressor gene 857 ChimerSeq FusionScan TCGA_RNA-Seq NIN-FAM179B NIN chr14 51297181 - FAM179B chr14 45521638 + Exonic hg19 BRCA TCGA-E9-A1N6 2 5'UTR-CDS Intra-chr q22.1 Oncogene Seq+ 858 ChimerSeq FusionScan TCGA_RNA-Seq HDHD1-REPS2 HDHD1 chrX 7066093 - REPS2 chrX 17065469 + Exonic hg19 BRCA TCGA-E9-A1N6 2 Out-of-Frame Intra-chr p22.2 859 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB46-ZDHHC5 ZBTB46 chr20 62407030 - ZDHHC5 chr11 57439492 + Exonic hg19 BRCA TCGA-E9-A1N6 2 CDS-5'UTR Inter-chr q13.33 Transcription factor q12.1 860 ChimerSeq FusionScan TCGA_RNA-Seq CUL3-IRS1 CUL3 chr2 225422375 - IRS1 chr2 227600966 - Exonic hg19 BRCA TCGA-E9-A1NE 6 CDS-3'UTR Intra-chr q36.2 q36.3 Seq+ 861 ChimerSeq FusionScan TCGA_RNA-Seq MAPK9-SNRPC MAPK9 chr5 179688683 - SNRPC chr6 34741222 + Exonic hg19 BRCA TCGA-E9-A1NE 2 Out-of-Frame Inter-chr q35.3 Tumor suppressor gene p21.31 862 ChimerSeq FusionScan TCGA_RNA-Seq STARD3-C17orf98 STARD3 chr17 37810003 + C17orf98 chr17 36991599 - Exonic hg19 BRCA TCGA-D8-A1XJ 6 Out-of-Frame Intra-chr q12 q12 Seq+ 863 ChimerSeq FusionScan TCGA_RNA-Seq THRA-TADA2A THRA chr17 38219345 + TADA2A chr17 35771355 + Exonic hg19 BRCA TCGA-D8-A1XJ 5 5'UTR-5'UTR Intra-chr q21.1 Tumor suppressor gene Transcription factor q12 Seq+ 864 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0319L-PHC2 KIAA0319L chr1 35907846 - PHC2 chr1 33790620 - Exonic hg19 BRCA TCGA-D8-A1XJ 4 Out-of-Frame Intra-chr p34.3 p35.1 Seq+ 865 ChimerSeq FusionScan TCGA_RNA-Seq GNAS-PVRL2 GNAS chr20 57470739 + PVRL2 chr19 45385467 + Exonic hg19 BRCA TCGA-D8-A1XJ 3 Out-of-Frame Inter-chr q13.32 Oncogene Seq+ 866 ChimerSeq FusionScan TCGA_RNA-Seq STARD3-C17orf98 STARD3 chr17 37810003 + C17orf98 chr17 36993493 - Exonic hg19 BRCA TCGA-D8-A1XJ 3 In-Frame Intra-chr q12 q12 Seq+ 867 ChimerSeq FusionScan TCGA_RNA-Seq SDF4-UBE2J2 SDF4 chr1 1153837 - UBE2J2 chr1 1203372 - Exonic hg19 BRCA TCGA-D8-A1XJ 2 CDS-5'UTR Intra-chr p36.33 p36.33 868 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-MED1 ERBB2 chr17 37873733 + MED1 chr17 37571592 - Exonic hg19 BRCA TCGA-D8-A1XJ 2 Out-of-Frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 869 ChimerSeq FusionScan TCGA_RNA-Seq TSKU-GNAI3 TSKU chr11 76494448 + GNAI3 chr1 110116358 + Exonic hg19 BRCA TCGA-D8-A1XJ 2 5'UTR-CDS Inter-chr q13.5 p13.3 870 ChimerSeq FusionScan TCGA_RNA-Seq MED1-PIP4K2B MED1 chr17 37607290 - PIP4K2B chr17 36943173 - Exonic hg19 BRCA TCGA-D8-A1XJ 2 Out-of-Frame Intra-chr q12 Tumor suppressor gene q12 Seq+ 871 ChimerSeq FusionScan TCGA_RNA-Seq SPTBN2-FGF19 SPTBN2 chr11 66453868 - FGF19 chr11 69514344 - Exonic hg19 BRCA TCGA-A2-A3Y0 3 In-Frame Intra-chr q13.2 q13.3 Seq+ 872 ChimerSeq FusionScan TCGA_RNA-Seq ZNF727-DAB1 ZNF727 chr7 63529987 + DAB1 chr1 57611102 - Exonic hg19 BRCA TCGA-A2-A3Y0 3 In-Frame Inter-chr q11.21 Transcription factor p32.1 873 ChimerSeq FusionScan TCGA_RNA-Seq ZNF732-DAB1 ZNF732 chr4 289226 - DAB1 chr1 57611102 - Exonic hg19 BRCA TCGA-A2-A3Y0 3 In-Frame Inter-chr p16.3 Transcription factor p32.1 Seq+ 874 ChimerSeq FusionScan TCGA_RNA-Seq ACTL6A-MRPL47 ACTL6A chr3 179280905 + MRPL47 chr3 179311683 - Exonic hg19 BRCA TCGA-A2-A3Y0 2 Out-of-Frame Intra-chr q26.33 q26.33 875 ChimerSeq FusionScan TCGA_RNA-Seq SOCS7-CCT4 SOCS7 chr17 36508915 + CCT4 chr2 62110683 - Exonic hg19 BRCA TCGA-A2-A3Y0 2 Out-of-Frame Inter-chr q12 p15 876 ChimerSeq FusionScan TCGA_RNA-Seq H2AFY-CNOT6 H2AFY chr5 134688635 - CNOT6 chr5 179991488 + Exonic hg19 BRCA TCGA-E2-A15E 3 In-Frame Intra-chr q31.1 q35.3 Seq+ 877 ChimerSeq FusionScan TCGA_RNA-Seq PAK1-SHANK2 PAK1 chr11 77184596 - SHANK2 chr11 70507783 - Exonic hg19 BRCA TCGA-XX-A899 7 5'UTR-CDS Intra-chr q14.1 STE:STE20 q13.4 Seq+ 878 ChimerSeq FusionScan TCGA_RNA-Seq PAK1-CWF19L2 PAK1 chr11 77184596 - CWF19L2 chr11 107326502 - Exonic hg19 BRCA TCGA-XX-A899 3 5'UTR-CDS Intra-chr q14.1 STE:STE20 q22.3 Seq+ 879 ChimerSeq FusionScan TCGA_RNA-Seq JAM3-CTBP2 JAM3 chr11 133939054 + CTBP2 chr10 126692061 - Exonic hg19 BRCA TCGA-A2-A0YC 2 In-Frame Inter-chr q25 q26.13 880 ChimerSeq FusionScan TCGA_RNA-Seq ATF7-SPATS2 ATF7 chr12 53946324 - SPATS2 chr12 49890615 + Exonic hg19 BRCA TCGA-C8-A12Z 4 In-Frame Intra-chr q13.13 Transcription factor q13.12 Seq+ 881 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-SLC30A8 PVT1 chr8 128806980 + SLC30A8 chr8 118165182 + Exonic hg19 BRCA TCGA-C8-A12Z 3 5'UTR-CDS Intra-chr q24.21 q24.11 Seq+ 882 ChimerSeq FusionScan TCGA_RNA-Seq NCOR1-FBXO3 NCOR1 chr17 15960827 - FBXO3 chr11 33792376 - Exonic hg19 BRCA TCGA-D8-A1JD 2 In-Frame Inter-chr p11.2 Oncogene p13 Seq+ 883 ChimerSeq FusionScan TCGA_RNA-Seq MTG1-ZNF511 MTG1 chr10 135216277 + ZNF511 chr10 135126291 + Exonic hg19 BRCA TCGA-C8-A137 5 In-Frame Intra-chr q26.3 q26.3 Transcription factor Seq+ 884 ChimerSeq FusionScan TCGA_RNA-Seq MFSD3-BAIAP2 MFSD3 chr8 145736286 + BAIAP2 chr17 79089569 + Exonic hg19 BRCA TCGA-C8-A137 2 Out-of-Frame Inter-chr q24.3 q25.3 885 ChimerSeq FusionScan TCGA_RNA-Seq ARL6IP6-DCTD ARL6IP6 chr2 153574509 + DCTD chr4 183836728 - Exonic hg19 BRCA TCGA-BH-A0HK 2 5'UTR-5'UTR Inter-chr q23.3 q35.1 886 ChimerSeq FusionScan TCGA_RNA-Seq FAM49B-PVT1 FAM49B chr8 130915557 - PVT1 chr8 128902834 + Exonic hg19 BRCA TCGA-AR-A0U2 6 5'UTR-5'UTR Intra-chr q24.21 q24.21 887 ChimerSeq FusionScan TCGA_RNA-Seq SSH2-ANK1 SSH2 chr17 28256955 - ANK1 chr8 41615655 - Exonic hg19 BRCA TCGA-AR-A0U2 2 In-Frame Inter-chr q11.2 p11.21 888 ChimerSeq FusionScan TCGA_RNA-Seq NAA15-SLC10A7 NAA15 chr4 140291558 + SLC10A7 chr4 147179989 - Exonic hg19 BRCA TCGA-E9-A3Q9 3 Out-of-Frame Intra-chr q31.1 q31.22 Seq+ 889 ChimerSeq FusionScan TCGA_RNA-Seq MAGI3-NOTCH2 MAGI3 chr1 113933971 + NOTCH2 chr1 120539955 - Exonic hg19 BRCA TCGA-BH-A0W3 4 In-Frame Intra-chr p13.2 p12 Oncogene Tumor suppressor gene Seq+ 890 ChimerSeq FusionScan TCGA_RNA-Seq MAGI3-NOTCH2NL MAGI3 chr1 113933971 + NOTCH2NL chr1 145281368 + Exonic hg19 BRCA TCGA-BH-A0W3 4 In-Frame Intra-chr p13.2 q21.1 891 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-BH-A0W3 3 5'UTR-5'UTR Inter-chr p13.2 p22 892 ChimerSeq FusionScan TCGA_RNA-Seq IGSF3-KDM2A IGSF3 chr1 117208905 - KDM2A chr11 66947549 + Exonic hg19 BRCA TCGA-BH-A0W3 2 Out-of-Frame Inter-chr p13.1 q13.2 Transcription factor Seq+ 893 ChimerSeq FusionScan TCGA_RNA-Seq PSMB3-CWC25 PSMB3 chr17 36912243 + CWC25 chr17 36971350 - Exonic hg19 BRCA TCGA-E2-A14Y 4 In-Frame Intra-chr q12 Seq+ 894 ChimerSeq FusionScan TCGA_RNA-Seq TMEM97-IFT20 TMEM97 chr17 26646391 + IFT20 chr17 26657554 - Exonic hg19 BRCA TCGA-E2-A14Y 3 Out-of-Frame Intra-chr q11.2 q11.2 Seq+ 895 ChimerSeq FusionScan TCGA_RNA-Seq MAP2K3-NKAIN3 MAP2K3 chr17 21188281 + NKAIN3 chr8 63492097 + Exonic hg19 BRCA TCGA-E2-A14Y 2 Out-of-Frame Inter-chr p11.2 STE:STE7 q12.3 Seq+ 896 ChimerSeq FusionScan TCGA_RNA-Seq SLC6A6-FGD5 SLC6A6 chr3 14457961 + FGD5 chr3 14905634 + Exonic hg19 BRCA TCGA-AC-A7VB 3 5'UTR-CDS Intra-chr p25.1 p25.1 Seq+ 897 ChimerSeq FusionScan TCGA_RNA-Seq TRIT1-CHI3L2 TRIT1 chr1 40348989 - CHI3L2 chr1 111772473 + Exonic hg19 BRCA TCGA-XX-A89A 2 Out-of-Frame Intra-chr p34.2 Tumor suppressor gene p13.2 Seq+ 898 ChimerSeq FusionScan TCGA_RNA-Seq TAF2-ALDH16A1 TAF2 chr8 120843916 - ALDH16A1 chr19 49967110 + Exonic hg19 BRCA TCGA-AC-A5XU 4 In-Frame Inter-chr q24.12 q13.33 Seq+ 899 ChimerSeq FusionScan TCGA_RNA-Seq ZNF461-MATN2 ZNF461 chr19 37155599 - MATN2 chr8 98900302 + Exonic hg19 BRCA TCGA-AC-A5XU 2 CDS-5'UTR Inter-chr q13.12 Transcription factor q22.1 Seq+ 900 ChimerSeq FusionScan TCGA_RNA-Seq TRPS1-C19orf66 TRPS1 chr8 116599227 - C19orf66 chr19 10200332 + Exonic hg19 BRCA TCGA-AC-A5XU 2 In-Frame Inter-chr q23.3 Transcription factor p13.2 Seq+ 901 ChimerSeq FusionScan TCGA_RNA-Seq FZR1-NFIC FZR1 chr19 3506472 + NFIC chr19 3425103 + Exonic hg19 BRCA TCGA-AC-A5XU 2 5'UTR-CDS Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Transcription factor Seq+ 902 ChimerSeq FusionScan TCGA_RNA-Seq LPHN1-PODNL1 LPHN1 chr19 14316796 - PODNL1 chr19 14048819 - Exonic hg19 BRCA TCGA-AC-A2FM 5 5'UTR-CDS Intra-chr p13.12 Seq+ 903 ChimerSeq FusionScan TCGA_RNA-Seq RNF10-SYPL1 RNF10 chr12 120998689 + SYPL1 chr7 105739728 - Exonic hg19 BRCA TCGA-AC-A2FM 2 In-Frame Inter-chr q24.31 q22.3 Seq+ 904 ChimerSeq FusionScan TCGA_RNA-Seq TPM4-LRRC25 TPM4 chr19 16192856 + LRRC25 chr19 18502935 - Exonic hg19 BRCA TCGA-AC-A2FM 2 In-Frame Intra-chr p13.12 p13.11 Seq+ 905 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-AC-A2FM 2 5'UTR-5'UTR Inter-chr p13.2 p22 906 ChimerSeq FusionScan TCGA_RNA-Seq DCUN1D2-TMCO3 DCUN1D2 chr13 114144981 - TMCO3 chr13 114202617 + Exonic hg19 BRCA TCGA-BH-A18H 2 In-Frame Intra-chr q34 q34 Seq+ 907 ChimerSeq FusionScan TCGA_RNA-Seq LRP5-MOGAT2 LRP5 chr11 68193655 + MOGAT2 chr11 75431036 + Exonic hg19 BRCA TCGA-A1-A0SQ 4 In-Frame Intra-chr q13.2 q13.5 Seq+ 908 ChimerSeq FusionScan TCGA_RNA-Seq PPP6R3-POLD3 PPP6R3 chr11 68228295 + POLD3 chr11 74305105 + Exonic hg19 BRCA TCGA-A1-A0SQ 3 5'UTR-5'UTR Intra-chr q13.2 q13.4 Seq+ 909 ChimerSeq FusionScan TCGA_RNA-Seq ARFGAP1-SPAG4 ARFGAP1 chr20 61904272 + SPAG4 chr20 34207116 + Exonic hg19 BRCA TCGA-A1-A0SQ 2 5'UTR-CDS Intra-chr q13.33 q11.22 Seq+ 910 ChimerSeq FusionScan TCGA_RNA-Seq ZNF814-IRF3 ZNF814 chr19 58388283 - IRF3 chr19 50163090 - Exonic hg19 BRCA TCGA-A1-A0SQ 2 In-Frame Intra-chr q13.43 Transcription factor q13.33 Tumor suppressor gene Transcription factor Seq+ 911 ChimerSeq FusionScan TCGA_RNA-Seq EPRS-DNAH14 EPRS chr1 220160483 - DNAH14 chr1 225506284 + Exonic hg19 BRCA TCGA-A7-A26I 7 Out-of-Frame Intra-chr q41 q42.12 Seq+ 912 ChimerSeq FusionScan TCGA_RNA-Seq CLPTM1-CYP2A7 CLPTM1 chr19 45488561 + CYP2A7 chr19 41386533 - Exonic hg19 BRCA TCGA-A7-A26I 3 Out-of-Frame Intra-chr q13.32 q13.2 Seq+ 913 ChimerSeq FusionScan TCGA_RNA-Seq CLPTM1-CYP2A13 CLPTM1 chr19 45488561 + CYP2A13 chr19 41595951 + Exonic hg19 BRCA TCGA-A7-A26I 3 Out-of-Frame Intra-chr q13.32 q13.2 914 ChimerSeq FusionScan TCGA_RNA-Seq PLCB3-PGA3 PLCB3 chr11 64023088 + PGA3 chr11 60975762 + Exonic hg19 BRCA TCGA-LL-A6FQ 4 In-Frame Intra-chr q13.1 Tumor suppressor gene q12.2 Seq+ 915 ChimerSeq FusionScan TCGA_RNA-Seq CELF1-LUZP2 CELF1 chr11 47574543 - LUZP2 chr11 25071583 + Exonic hg19 BRCA TCGA-LL-A6FQ 2 5'UTR-CDS Intra-chr p11.2 p14.3 Seq+ 916 ChimerSeq FusionScan TCGA_RNA-Seq SMARCE1-HELZ SMARCE1 chr17 38798706 - HELZ chr17 65083197 - Exonic hg19 BRCA TCGA-A2-A3XZ 9 In-Frame Intra-chr q21.2 q24.2 Seq+ 917 ChimerSeq FusionScan TCGA_RNA-Seq SEC24D-CFI SEC24D chr4 119718837 - CFI chr4 110687980 - Exonic hg19 BRCA TCGA-A2-A3XZ 3 In-Frame Intra-chr q26 q25 Seq+ 918 ChimerSeq FusionScan TCGA_RNA-Seq USP6-PTRH2 USP6 chr17 5052062 + PTRH2 chr17 57775339 - Exonic hg19 BRCA TCGA-A2-A3XZ 2 CDS-5'UTR Intra-chr p13.2 q23.1 919 ChimerSeq FusionScan TCGA_RNA-Seq HECTD2-PCGF5 HECTD2 chr10 93185167 + PCGF5 chr10 93021082 + Exonic hg19 BRCA TCGA-C8-A1HG 3 Out-of-Frame Intra-chr q23.32 q23.32 Seq+ 920 ChimerSeq FusionScan TCGA_RNA-Seq ACLY-DNAJC7 ACLY chr17 40057948 - DNAJC7 chr17 40129341 - Exonic hg19 BRCA TCGA-LL-A6FR 6 In-Frame Intra-chr q21.2 q21.2 Seq+ 921 ChimerSeq FusionScan TCGA_RNA-Seq RNF40-PLK1 RNF40 chr16 30783511 + PLK1 chr16 23698789 + Exonic hg19 BRCA TCGA-AC-A6IV 3 Out-of-Frame Intra-chr p11.2 p12.2 Other:PLK Tumor suppressor gene Seq+ 922 ChimerSeq FusionScan TCGA_RNA-Seq NFX1-HNRNPC NFX1 chr9 33290595 + HNRNPC chr14 21702388 - Exonic hg19 BRCA TCGA-AR-A1AS 2 CDS-5'UTR Inter-chr p13.3 Transcription factor q11.2 923 ChimerSeq FusionScan TCGA_RNA-Seq SNX13-STAP2 SNX13 chr7 17979906 - STAP2 chr19 4334041 - Exonic hg19 BRCA TCGA-B6-A0I9 8 In-Frame Inter-chr p21.1 p13.3 Seq+ 924 ChimerSeq FusionScan TCGA_RNA-Seq TRADD-SLC12A1 TRADD chr16 67193740 - SLC12A1 chr15 48548007 + Exonic hg19 BRCA TCGA-B6-A0I9 7 5'UTR-CDS Inter-chr q22.1 q21.1 Seq+ 925 ChimerSeq FusionScan TCGA_RNA-Seq ORMDL3-ZPBP2 ORMDL3 chr17 38080282 - ZPBP2 chr17 38029296 + Exonic hg19 BRCA TCGA-B6-A0I9 4 Out-of-Frame Intra-chr q21.1 q21.1 Seq+ 926 ChimerSeq FusionScan TCGA_RNA-Seq ORMDL3-ZPBP2 ORMDL3 chr17 38080282 - ZPBP2 chr17 38026946 + Exonic hg19 BRCA TCGA-B6-A0I9 4 Out-of-Frame Intra-chr q21.1 q21.1 Seq+ 927 ChimerSeq FusionScan TCGA_RNA-Seq FCHSD2-NBPF6 FCHSD2 chr11 72851075 - NBPF6 chr1 109002554 + Exonic hg19 BRCA TCGA-B6-A0I9 3 In-Frame Inter-chr q13.4 p13.3 Seq+ 928 ChimerSeq FusionScan TCGA_RNA-Seq ASTN2-PNMT ASTN2 chr9 120053604 - PNMT chr17 37825881 + Exonic hg19 BRCA TCGA-B6-A0I9 3 Out-of-Frame Inter-chr q33.1 q12 Seq+ 929 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KA5-C14orf132 RPS6KA5 chr14 91526675 - C14orf132 chr14 96552847 + Exonic hg19 BRCA TCGA-B6-A0I9 2 Out-of-Frame Intra-chr q32.11 q32.2 Seq+ 930 ChimerSeq FusionScan TCGA_RNA-Seq BPTF-PITPNC1 BPTF chr17 65850878 + PITPNC1 chr17 65665623 + Exonic hg19 BRCA TCGA-B6-A0I9 2 Out-of-Frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 931 ChimerSeq FusionScan TCGA_RNA-Seq RORA-ARNT2 RORA chr15 61521251 - ARNT2 chr15 80885940 + Exonic hg19 BRCA TCGA-B6-A0I9 2 Out-of-Frame Intra-chr q22.2 Transcription factor q25.1 Transcription factor Seq+ 932 ChimerSeq FusionScan TCGA_RNA-Seq ORMDL3-ZPBP2 ORMDL3 chr17 38080282 - ZPBP2 chr17 38027716 + Exonic hg19 BRCA TCGA-B6-A0I9 2 Out-of-Frame Intra-chr q21.1 q21.1 Seq+ 933 ChimerSeq FusionScan TCGA_RNA-Seq RPS3-TSKU RPS3 chr11 75113490 + TSKU chr11 76506652 + Exonic hg19 BRCA TCGA-A2-A3KC 3 CDS-5'UTR Intra-chr q13.4 q13.5 Seq+ 934 ChimerSeq FusionScan TCGA_RNA-Seq MANF-SETD2 MANF chr3 51423766 + SETD2 chr3 47108608 - Exonic hg19 BRCA TCGA-A2-A3KC 3 In-Frame Intra-chr p21.2 p21.31 Oncogene Tumor suppressor gene Seq+ 935 ChimerSeq FusionScan TCGA_RNA-Seq KLHL18-TEX264 KLHL18 chr3 47324584 + TEX264 chr3 51708286 + Exonic hg19 BRCA TCGA-A2-A3KC 2 CDS-5'UTR Intra-chr p21.31 p21.2 Seq+ 936 ChimerSeq FusionScan TCGA_RNA-Seq KLHL18-TEX264 KLHL18 chr3 47324584 + TEX264 chr3 51718428 + Exonic hg19 BRCA TCGA-A2-A3KC 2 In-Frame Intra-chr p21.31 p21.2 Seq+ 937 ChimerSeq FusionScan TCGA_RNA-Seq MAP4-FLJ39534 MAP4 chr3 48040127 - FLJ39534 chr3 47277546 + Exonic hg19 BRCA TCGA-A2-A3KC 2 CDS-5'UTR Intra-chr p21.31 938 ChimerSeq FusionScan TCGA_RNA-Seq BRIP1-SPAG9 BRIP1 chr17 59934418 - SPAG9 chr17 49157065 - Exonic hg19 BRCA TCGA-AR-A0TQ 6 Out-of-Frame Intra-chr q23.2 Oncogene q21.33 Seq+ 939 ChimerSeq FusionScan TCGA_RNA-Seq TADA2A-MED24 TADA2A chr17 35802753 + MED24 chr17 38192407 - Exonic hg19 BRCA TCGA-AR-A0TQ 2 In-Frame Intra-chr q12 q21.1 Seq+ 940 ChimerSeq FusionScan TCGA_RNA-Seq SPAG9-BRIP1 SPAG9 chr17 49133772 - BRIP1 chr17 59924581 - Exonic hg19 BRCA TCGA-AR-A0TQ 2 In-Frame Intra-chr q21.33 q23.2 Oncogene Seq+ 941 ChimerSeq FusionScan TCGA_RNA-Seq TADA2A-MED24 TADA2A chr17 35804870 + MED24 chr17 38192407 - Exonic hg19 BRCA TCGA-AR-A0TQ 2 Out-of-Frame Intra-chr q12 q21.1 Seq+ 942 ChimerSeq FusionScan TCGA_RNA-Seq TRPS1-AARD TRPS1 chr8 116680771 - AARD chr8 117954796 + Exonic hg19 BRCA TCGA-E2-A572 2 5'UTR-CDS Intra-chr q23.3 Transcription factor q24.11 943 ChimerSeq FusionScan TCGA_RNA-Seq CHIC2-HSPA4 CHIC2 chr4 54930348 - HSPA4 chr5 132412345 + Exonic hg19 BRCA TCGA-E2-A572 2 Out-of-Frame Inter-chr q12 q31.1 944 ChimerSeq FusionScan TCGA_RNA-Seq NRIP1-HIBADH NRIP1 chr21 16386664 - HIBADH chr7 27570967 - Exonic hg19 BRCA TCGA-AN-A0FZ 12 5'UTR-CDS Inter-chr q21.1 p15.2 Seq+ 945 ChimerSeq FusionScan TCGA_RNA-Seq NRIP1-HIBADH NRIP1 chr21 16415815 - HIBADH chr7 27570967 - Exonic hg19 BRCA TCGA-AN-A0FZ 9 5'UTR-CDS Inter-chr q21.1 p15.2 Seq+ 946 ChimerSeq FusionScan TCGA_RNA-Seq NRIP1-HIBADH NRIP1 chr21 16437065 - HIBADH chr7 27570967 - Exonic hg19 BRCA TCGA-AN-A0FZ 7 5'UTR-CDS Inter-chr q21.1 p15.2 Seq+ 947 ChimerSeq FusionScan TCGA_RNA-Seq RAB11FIP3-CREB5 RAB11FIP3 chr16 521389 + CREB5 chr7 28843815 + Exonic hg19 BRCA TCGA-AN-A0FZ 5 In-Frame Inter-chr p15.1 Transcription factor Seq+ 948 ChimerSeq FusionScan TCGA_RNA-Seq PCSK6-LINS PCSK6 chr15 101983760 - LINS chr15 101114446 - Exonic hg19 BRCA TCGA-AN-A0FZ 3 In-Frame Intra-chr q26.3 Seq+ 949 ChimerSeq FusionScan TCGA_RNA-Seq KBTBD2-HDAC9 KBTBD2 chr7 32931147 - HDAC9 chr7 18535884 + Exonic hg19 BRCA TCGA-AN-A0FZ 3 5'UTR-5'UTR Intra-chr p14.3 p21.1 Seq+ 950 ChimerSeq FusionScan TCGA_RNA-Seq BAG4-C11orf24 BAG4 chr8 38034657 + C11orf24 chr11 68035719 - Exonic hg19 BRCA TCGA-AN-A0FZ 2 CDS-5'UTR Inter-chr p11.23 q13.2 951 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-MDM1 FRS2 chr12 69925836 + MDM1 chr12 68725001 - Exonic hg19 BRCA TCGA-AN-A0FZ 2 5'UTR-CDS Intra-chr q15 q15 Seq+ 952 ChimerSeq FusionScan TCGA_RNA-Seq SEP15-COL24A1 2019_ 9_ 15_ chr1 87346344 - COL24A1 chr1 86203188 - Exonic hg19 BRCA TCGA-AN-A0FZ 2 In-Frame Intra-chr p22.3 Seq+ 953 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-MDM1 CPSF6 chr12 69656342 + MDM1 chr12 68690762 - Exonic hg19 BRCA TCGA-AN-A0FZ 2 3'UTR-CDS Intra-chr q15 q15 Seq+ 954 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-MDM1 CPSF6 chr12 69656342 + MDM1 chr12 68689146 - Exonic hg19 BRCA TCGA-AN-A0FZ 2 3'UTR-CDS Intra-chr q15 q15 Seq+ 955 ChimerSeq FusionScan TCGA_RNA-Seq TMX2-CTNND1 TMX2 chr11 57505140 + CTNND1 chr11 57561481 + Exonic hg19 BRCA TCGA-GM-A2DH 2 Out-of-Frame Intra-chr q12.1 q12.1 Tumor suppressor gene 956 ChimerSeq FusionScan TCGA_RNA-Seq SLC4A1AP-DHX9 SLC4A1AP chr2 27908144 + DHX9 chr1 182827685 + Exonic hg19 BRCA TCGA-BH-A1ES 2 Out-of-Frame Inter-chr p23.3 q25.3 957 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-SUGT1 RCC1 chr1 28832596 + SUGT1 chr13 53238169 + Exonic hg19 BRCA TCGA-BH-A1ES 2 5'UTR-CDS Inter-chr p35.3 q14.3 958 ChimerSeq FusionScan TCGA_RNA-Seq RNF13-GMPS RNF13 chr3 149619949 + GMPS chr3 155615715 + Exonic hg19 BRCA TCGA-BH-A1ES 2 In-Frame Intra-chr q25.1 q25.31 959 ChimerSeq FusionScan TCGA_RNA-Seq CHN2-PRR15 CHN2 chr7 29440444 + PRR15 chr7 29605800 + Exonic hg19 BRCA TCGA-BH-A1ES 2 CDS-5'UTR Intra-chr p14.3 p14.3 Seq+ 960 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BRCA TCGA-BH-A1ES 2 Out-of-Frame Intra-chr q22.2 q22.2 961 ChimerSeq FusionScan TCGA_RNA-Seq PHF21A-C18orf34 PHF21A chr11 46098304 - C18orf34 chr18 30873276 - Exonic hg19 BRCA TCGA-BH-A0BG 5 Out-of-Frame Inter-chr p11.2 Transcription factor Seq+ 962 ChimerSeq FusionScan TCGA_RNA-Seq PHF21A-C18orf34 PHF21A chr11 46098304 - C18orf34 chr18 30847261 - Exonic hg19 BRCA TCGA-BH-A0BG 3 In-Frame Inter-chr p11.2 Transcription factor Seq+ 963 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BRCA TCGA-BH-A0BG 2 Out-of-Frame Intra-chr q22.2 q22.2 964 ChimerSeq FusionScan TCGA_RNA-Seq CCT8-LHX4 CCT8 chr21 30432861 - LHX4 chr1 180217419 + Exonic hg19 BRCA TCGA-EW-A6SA 2 Out-of-Frame Inter-chr q21.3 q25.2 Tumor suppressor gene Transcription factor Seq+ 965 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BRCA TCGA-EW-A6SA 2 Out-of-Frame Intra-chr q22.2 q22.2 966 ChimerSeq FusionScan TCGA_RNA-Seq SRPK1-DDAH1 SRPK1 chr6 35836786 - DDAH1 chr1 85824530 - Exonic hg19 BRCA TCGA-BH-A5IZ 3 In-Frame Inter-chr p21.31 CMGC:SRPK p22.3 Seq+ 967 ChimerSeq FusionScan TCGA_RNA-Seq LARP4-RYR3 LARP4 chr12 50794811 + RYR3 chr15 34028435 + Exonic hg19 BRCA TCGA-BH-A5IZ 3 Out-of-Frame Inter-chr q13.12 q13.3 Seq+ 968 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-A2-A25C 2 5'UTR-5'UTR Inter-chr p13.2 p22 969 ChimerSeq FusionScan TCGA_RNA-Seq SUPT4H1-PSMD12 SUPT4H1 chr17 56428762 - PSMD12 chr17 65341973 - Exonic hg19 BRCA TCGA-AN-A0FW 6 Out-of-Frame Intra-chr q22 q24.2 Seq+ 970 ChimerSeq FusionScan TCGA_RNA-Seq MSI2-SLC39A11 MSI2 chr17 55339553 + SLC39A11 chr17 71027853 - Exonic hg19 BRCA TCGA-AN-A0FW 5 In-Frame Intra-chr q22 q25.1 Seq+ 971 ChimerSeq FusionScan TCGA_RNA-Seq DDX42-DCAF7 DDX42 chr17 61851736 + DCAF7 chr17 61655830 + Exonic hg19 BRCA TCGA-AN-A0FW 5 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 972 ChimerSeq FusionScan TCGA_RNA-Seq DLG1-PIGZ DLG1 chr3 196921295 - PIGZ chr3 196678902 - Exonic hg19 BRCA TCGA-AN-A0FW 3 CDS-5'UTR Intra-chr q29 Tumor suppressor gene q29 Seq+ 973 ChimerSeq FusionScan TCGA_RNA-Seq SOGA1-C20orf132 SOGA1 chr20 35491060 - C20orf132 chr20 35738758 - Exonic hg19 BRCA TCGA-AN-A0FW 3 In-Frame Intra-chr q11.23 974 ChimerSeq FusionScan TCGA_RNA-Seq UCKL1-TXN UCKL1 chr20 62587612 - TXN chr9 113013742 - Exonic hg19 BRCA TCGA-C8-A12K 2 Out-of-Frame Inter-chr q13.33 q31.3 Seq+ 975 ChimerSeq FusionScan TCGA_RNA-Seq CTIF-IER3IP1 CTIF chr18 46146116 + IER3IP1 chr18 44683908 - Exonic hg19 BRCA TCGA-A2-A3XY 3 Out-of-Frame Intra-chr q21.1 976 ChimerSeq FusionScan TCGA_RNA-Seq SETD2-ULK4 SETD2 chr3 47155365 - ULK4 chr3 41504744 - Exonic hg19 BRCA TCGA-A2-A3XY 2 Out-of-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene p22.1 Other:ULK Seq+ 977 ChimerSeq FusionScan TCGA_RNA-Seq CTCF-NUTF2 CTCF chr16 67605167 + NUTF2 chr16 67899004 + Exonic hg19 BRCA TCGA-A2-A3XY 2 5'UTR-5'UTR Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 Seq+ 978 ChimerSeq FusionScan TCGA_RNA-Seq NUP62-KCNQ2 NUP62 chr19 50430950 - KCNQ2 chr20 62076717 - Exonic hg19 BRCA TCGA-A2-A3XW 2 5'UTR-CDS Inter-chr q13.33 Seq+ 979 ChimerSeq FusionScan TCGA_RNA-Seq LHFPL2-TTC32 LHFPL2 chr5 77928086 - TTC32 chr2 20097796 - Exonic hg19 BRCA TCGA-E2-A573 2 5'UTR-CDS Inter-chr q14.1 p24.1 980 ChimerSeq FusionScan TCGA_RNA-Seq CAPZB-SCEL CAPZB chr1 19670851 - SCEL chr13 78208513 + Exonic hg19 BRCA TCGA-E2-A573 2 In-Frame Inter-chr p36.13 q22.3 Seq+ 981 ChimerSeq FusionScan TCGA_RNA-Seq CALD1-LRGUK CALD1 chr7 134464500 + LRGUK chr7 133932307 + Exonic hg19 BRCA TCGA-E9-A244 14 5'UTR-CDS Intra-chr q33 q33 Seq+ 982 ChimerSeq FusionScan TCGA_RNA-Seq CALD1-LRGUK CALD1 chr7 134464500 + LRGUK chr7 133933702 + Exonic hg19 BRCA TCGA-E9-A244 9 5'UTR-CDS Intra-chr q33 q33 Seq+ 983 ChimerSeq FusionScan TCGA_RNA-Seq VTCN1-NUP88 VTCN1 chr1 117695712 - NUP88 chr17 5292280 - Exonic hg19 BRCA TCGA-E9-A244 7 Out-of-Frame Inter-chr p12 p13.2 Seq+ 984 ChimerSeq FusionScan TCGA_RNA-Seq CTNND1-DDAH2 CTNND1 chr11 57529518 + DDAH2 chr6 31696522 - Exonic hg19 BRCA TCGA-E9-A244 5 5'UTR-5'UTR Inter-chr q12.1 Tumor suppressor gene Seq+ 985 ChimerSeq FusionScan TCGA_RNA-Seq VGLL1-CD40LG VGLL1 chrX 135632980 + CD40LG chrX 135741197 + Exonic hg19 BRCA TCGA-E9-A244 3 In-Frame Intra-chr q26.3 q26.3 Seq+ 986 ChimerSeq FusionScan TCGA_RNA-Seq CSDE1-DENND2C CSDE1 chr1 115292441 - DENND2C chr1 115168809 - Exonic hg19 BRCA TCGA-E9-A244 2 5'UTR-5'UTR Intra-chr p13.2 p13.2 Seq+ 987 ChimerSeq FusionScan TCGA_RNA-Seq SAMD8-C10orf11 SAMD8 chr10 76910864 + C10orf11 chr10 77795765 + Exonic hg19 BRCA TCGA-E9-A244 2 In-Frame Intra-chr q22.2 Seq+ 988 ChimerSeq FusionScan TCGA_RNA-Seq KAT6A-KIF13B KAT6A chr8 41909418 - KIF13B chr8 29102956 - Exonic hg19 BRCA TCGA-BH-A0DO 2 5'UTR-CDS Intra-chr p11.21 Oncogene p12 Seq+ 989 ChimerSeq FusionScan TCGA_RNA-Seq ZNF107-ITFG1 ZNF107 chr7 64126663 + ITFG1 chr16 47252857 - Exonic hg19 BRCA TCGA-E9-A245 2 5'UTR-CDS Inter-chr q11.21 Transcription factor q12.1 990 ChimerSeq FusionScan TCGA_RNA-Seq C11orf30-LRP5 C11orf30 chr11 76175124 + LRP5 chr11 68153783 + Exonic hg19 BRCA TCGA-LD-A7W6 2 Out-of-Frame Intra-chr q13.2 Seq+ 991 ChimerSeq FusionScan TCGA_RNA-Seq TADA3-RRNAD1 TADA3 chr3 9825711 - RRNAD1 chr1 156705516 + Exonic hg19 BRCA TCGA-A8-A083 2 In-Frame Inter-chr p25.3 q23.1 992 ChimerSeq FusionScan TCGA_RNA-Seq ZNF703-EIF4EBP1 ZNF703 chr8 37553740 + EIF4EBP1 chr8 37914598 + Exonic hg19 BRCA TCGA-AR-A5QQ 3 Out-of-Frame Intra-chr p11.23 Transcription factor p11.23 Seq+ 993 ChimerSeq FusionScan TCGA_RNA-Seq DERA-MPRIP DERA chr12 16064348 + MPRIP chr17 16979023 + Exonic hg19 BRCA TCGA-B6-A0IK 2 Out-of-Frame Inter-chr p12.3 p11.2 994 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-NSMCE2 PVT1 chr8 128806980 + NSMCE2 chr8 126369460 + Exonic hg19 BRCA TCGA-B6-A0IK 2 5'UTR-CDS Intra-chr q24.21 q24.13 KB Pub 995 ChimerSeq FusionScan TCGA_RNA-Seq IGF1R-WDR93 IGF1R chr15 99251336 + WDR93 chr15 90244937 + Exonic hg19 BRCA TCGA-A1-A0SF 3 CDS-5'UTR Intra-chr q26.3 TK:InsR Oncogene q26.1 Seq+ 996 ChimerSeq FusionScan TCGA_RNA-Seq ENSA-FBP1 ENSA chr1 150598117 - FBP1 chr9 97382773 - Exonic hg19 BRCA TCGA-A1-A0SF 2 In-Frame Inter-chr q21.3 q22.32 Tumor suppressor gene 997 ChimerSeq FusionScan TCGA_RNA-Seq CCNF-MALL CCNF chr16 2483068 + MALL chr2 110843334 - Exonic hg19 BRCA TCGA-GM-A3XL 6 Out-of-Frame Inter-chr p13.3 q13 Seq+ 998 ChimerSeq FusionScan TCGA_RNA-Seq MTHFD1L-RGS17 MTHFD1L chr6 151209117 + RGS17 chr6 153365178 - Exonic hg19 BRCA TCGA-A2-A0CY 4 CDS-5'UTR Intra-chr q25.1 q25.2 Seq+ 999 ChimerSeq FusionScan TCGA_RNA-Seq EZR-RB1CC1 EZR chr6 159206340 - RB1CC1 chr8 53537347 - Exonic hg19 BRCA TCGA-A2-A0CY 4 Out-of-Frame Inter-chr q25.3 q11.23 Tumor suppressor gene Seq+ 1000 ChimerSeq FusionScan TCGA_RNA-Seq FAM168A-RAB6A FAM168A chr11 73179449 - RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-A2-A0CY 2 Out-of-Frame Intra-chr q13.4 q13.4 Seq+ 1001 ChimerSeq FusionScan TCGA_RNA-Seq ITFG1-LONP2 ITFG1 chr16 47399698 - LONP2 chr16 48368126 + Exonic hg19 BRCA TCGA-A8-A06Y 2 In-Frame Intra-chr q12.1 q12.1 1002 ChimerSeq FusionScan TCGA_RNA-Seq KATNAL2-MYO5B KATNAL2 chr18 44526886 + MYO5B chr18 47581748 - Exonic hg19 BRCA TCGA-A8-A09D 2 5'UTR-CDS Intra-chr q21.1 q21.1 1003 ChimerSeq FusionScan TCGA_RNA-Seq ATG13-TSPAN18 ATG13 chr11 46639440 + TSPAN18 chr11 44881878 + Exonic hg19 BRCA TCGA-A8-A09D 2 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 1004 ChimerSeq FusionScan TCGA_RNA-Seq RASSF8-SSPN RASSF8 chr12 26208379 + SSPN chr12 26377225 + Exonic hg19 BRCA TCGA-A8-A09D 2 Out-of-Frame Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 1005 ChimerSeq FusionScan TCGA_RNA-Seq PDE10A-POLB PDE10A chr6 166075434 - POLB chr8 42229080 + Exonic hg19 BRCA TCGA-D8-A13Z 6 In-Frame Inter-chr q27 p11.21 Seq+ 1006 ChimerSeq FusionScan TCGA_RNA-Seq PDE10A-POLB PDE10A chr6 165989899 - POLB chr8 42229080 + Exonic hg19 BRCA TCGA-D8-A13Z 4 3'UTR-CDS Inter-chr q27 p11.21 Seq+ 1007 ChimerSeq FusionScan TCGA_RNA-Seq PRLR-PLCXD3 PRLR chr5 35230369 - PLCXD3 chr5 41382636 - Exonic hg19 BRCA TCGA-D8-A13Z 3 5'UTR-CDS Intra-chr p13.2 p13.1 Seq+ 1008 ChimerSeq FusionScan TCGA_RNA-Seq MCM5-TOM1 MCM5 chr22 35817453 + TOM1 chr22 35713869 + Exonic hg19 BRCA TCGA-D8-A1XQ 3 In-Frame Intra-chr q12.3 q12.3 Seq+ 1009 ChimerSeq FusionScan TCGA_RNA-Seq PRCC-BTF3L4 PRCC chr1 156738031 + BTF3L4 chr1 52549011 + Exonic hg19 BRCA TCGA-E9-A1R3 2 In-Frame Intra-chr q23.1 p32.3 1010 ChimerSeq FusionScan TCGA_RNA-Seq TCEB3-IFT140 TCEB3 chr1 24080950 + IFT140 chr16 1608135 - Exonic hg19 BRCA TCGA-A8-A07O 6 In-Frame Inter-chr Tumor suppressor gene p13.3 Seq+ 1011 ChimerSeq FusionScan TCGA_RNA-Seq AGPAT3-PDXK AGPAT3 chr21 45323900 + PDXK chr21 45153949 + Exonic hg19 BRCA TCGA-A8-A07O 5 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 1012 ChimerSeq FusionScan TCGA_RNA-Seq POLR2A-SLC16A13 POLR2A chr17 7399392 + SLC16A13 chr17 6941470 + Exonic hg19 BRCA TCGA-A8-A07O 4 In-Frame Intra-chr p13.1 p13.1 Seq+ 1013 ChimerSeq FusionScan TCGA_RNA-Seq MTR-IFI16 MTR chr1 237001899 + IFI16 chr1 159015086 + Exonic hg19 BRCA TCGA-A8-A07O 4 In-Frame Intra-chr q43 Oncogene q23.1 Tumor suppressor gene Seq+ 1014 ChimerSeq FusionScan TCGA_RNA-Seq STRBP-DENND1A STRBP chr9 126030714 - DENND1A chr9 126531842 - Exonic hg19 BRCA TCGA-A8-A07O 4 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 1015 ChimerSeq FusionScan TCGA_RNA-Seq CTTN-ANO1 CTTN chr11 70256066 + ANO1 chr11 69933857 + Exonic hg19 BRCA TCGA-A8-A07O 3 In-Frame Intra-chr q13.3 q13.3 Seq+ 1016 ChimerSeq FusionScan TCGA_RNA-Seq STRBP-DENND1A STRBP chr9 125999108 - DENND1A chr9 126531842 - Exonic hg19 BRCA TCGA-A8-A07O 3 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 1017 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-LYZ FRS2 chr12 69925836 + LYZ chr12 69743887 + Exonic hg19 BRCA TCGA-A8-A07O 2 5'UTR-CDS Intra-chr q15 q15 Seq+ 1018 ChimerSeq FusionScan TCGA_RNA-Seq RAB1A-SPRED2 RAB1A chr2 65357026 - SPRED2 chr2 65544017 - Exonic hg19 BRCA TCGA-A8-A07O 2 Out-of-Frame Intra-chr p14 p14 Seq+ 1019 ChimerSeq FusionScan TCGA_RNA-Seq LIMK2-RUFY1 LIMK2 chr22 31621805 + RUFY1 chr5 179007947 + Exonic hg19 BRCA TCGA-A8-A07O 2 In-Frame Inter-chr q12.2 TKL:LISK Seq+ 1020 ChimerSeq FusionScan TCGA_RNA-Seq NOTCH1-SNHG7 NOTCH1 chr9 139417301 - SNHG7 chr9 139621538 - Exonic hg19 BRCA TCGA-A8-A07O 2 CDS-3'UTR Intra-chr q34.3 Oncogene Tumor suppressor gene q34.3 1021 ChimerSeq FusionScan TCGA_RNA-Seq POLR2A-SLC16A13 POLR2A chr17 7399392 + SLC16A13 chr17 6943081 + Exonic hg19 BRCA TCGA-A8-A07O 2 In-Frame Intra-chr p13.1 p13.1 Seq+ 1022 ChimerSeq FusionScan TCGA_RNA-Seq PTP4A1-EYS PTP4A1 chr6 64286890 + EYS chr6 65532715 - Exonic hg19 BRCA TCGA-E9-A2JS 2 Out-of-Frame Intra-chr q12 q12 Seq+ 1023 ChimerSeq FusionScan TCGA_RNA-Seq KIF13B-ODZ4 KIF13B chr8 28980107 - ODZ4 chr11 78387432 - Exonic hg19 BRCA TCGA-A2-A0ES 4 In-Frame Inter-chr p12 Seq+ 1024 ChimerSeq FusionScan TCGA_RNA-Seq UVRAG-ZMAT4 UVRAG chr11 75728024 + ZMAT4 chr8 40389757 - Exonic hg19 BRCA TCGA-A2-A0ES 4 In-Frame Inter-chr q13.5 Tumor suppressor gene p11.21 Transcription factor Seq+ 1025 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1211-STMN1 KIAA1211 chr4 57045596 + STMN1 chr1 26231229 - Exonic hg19 BRCA TCGA-E2-A14Q 5 5'UTR-5'UTR Inter-chr q12 p36.11 Seq+ 1026 ChimerSeq FusionScan TCGA_RNA-Seq CPNE1-LPO CPNE1 chr20 34252681 - LPO chr17 56344709 + Exonic hg19 BRCA TCGA-AN-A0AM 9 5'UTR-5'UTR Inter-chr q11.22 q22 Seq+ 1027 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-RAB3IP CPSF6 chr12 69633486 + RAB3IP chr12 70193988 + Exonic hg19 BRCA TCGA-AN-A0AM 6 In-Frame Intra-chr q15 q15 Seq+ 1028 ChimerSeq FusionScan TCGA_RNA-Seq CPNE1-LPO CPNE1 chr20 34252723 - LPO chr17 56344709 + Exonic hg19 BRCA TCGA-AN-A0AM 6 5'UTR-5'UTR Inter-chr q11.22 q22 Seq+ 1029 ChimerSeq FusionScan TCGA_RNA-Seq TRIO-MARCH11 TRIO chr5 14488369 + 2019_ 3_ 11_ chr5 16091190 - Exonic hg19 BRCA TCGA-AN-A0AM 5 In-Frame Intra-chr p15.2 p15.1 Seq+ 1030 ChimerSeq FusionScan TCGA_RNA-Seq SNX1-FAM96A SNX1 chr15 64388371 + FAM96A chr15 64373350 - Exonic hg19 BRCA TCGA-AN-A0AM 5 Out-of-Frame Intra-chr q22.31 q22.31 Seq+ 1031 ChimerSeq FusionScan TCGA_RNA-Seq WNK1-PIP4K2C WNK1 chr12 966415 + PIP4K2C chr12 57995308 + Exonic hg19 BRCA TCGA-AN-A0AM 4 Out-of-Frame Intra-chr p13.33 q13.3 Seq+ 1032 ChimerSeq FusionScan TCGA_RNA-Seq ZC3H7B-RANGAP1 ZC3H7B chr22 41697776 + RANGAP1 chr22 41664160 - Exonic hg19 BRCA TCGA-AN-A0AM 4 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 1033 ChimerSeq FusionScan TCGA_RNA-Seq MDM2-XPOT MDM2 chr12 69222711 + XPOT chr12 64833023 + Exonic hg19 BRCA TCGA-AN-A0AM 4 In-Frame Intra-chr q15 Oncogene q14.2 Seq+ 1034 ChimerSeq FusionScan TCGA_RNA-Seq CPNE1-LPO CPNE1 chr20 34252681 - LPO chr17 56345147 + Exonic hg19 BRCA TCGA-AN-A0AM 3 5'UTR-5'UTR Inter-chr q11.22 q22 Seq+ 1035 ChimerSeq FusionScan TCGA_RNA-Seq RABEP1-NUP88 RABEP1 chr17 5185815 + NUP88 chr17 5308563 - Exonic hg19 BRCA TCGA-AN-A0AM 3 Out-of-Frame Intra-chr p13.2 p13.2 Seq+ 1036 ChimerSeq FusionScan TCGA_RNA-Seq RHBDF2-JMJD6 RHBDF2 chr17 74483793 - JMJD6 chr17 74714942 - Exonic hg19 BRCA TCGA-AN-A0AM 2 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 1037 ChimerSeq FusionScan TCGA_RNA-Seq TBCD-NFIX TBCD chr17 80899359 + NFIX chr19 13135834 + Exonic hg19 BRCA TCGA-AN-A0AM 2 In-Frame Inter-chr p13.13 Transcription factor Seq+ 1038 ChimerSeq FusionScan TCGA_RNA-Seq TBCD-NFIC TBCD chr17 80899359 + NFIC chr19 3381709 + Exonic hg19 BRCA TCGA-AN-A0AM 2 In-Frame Inter-chr p13.3 Transcription factor 1039 ChimerSeq FusionScan TCGA_RNA-Seq FAM96A-SNX1 FAM96A chr15 64380885 - SNX1 chr15 64404771 + Exonic hg19 BRCA TCGA-AN-A0AM 2 Out-of-Frame Intra-chr q22.31 q22.31 Seq+ 1040 ChimerSeq FusionScan TCGA_RNA-Seq SEPT9-SMG6 SEPT9 chr17 75478417 + SMG6 chr17 2091809 - Exonic hg19 BRCA TCGA-AN-A0AM 2 In-Frame Intra-chr p13.3 Seq+ 1041 ChimerSeq FusionScan TCGA_RNA-Seq IL12RB2-DAB1 IL12RB2 chr1 67845806 + DAB1 chr1 57611102 - Exonic hg19 BRCA TCGA-AN-A0AM 2 In-Frame Intra-chr p31.3 p32.1 Seq+ 1042 ChimerSeq FusionScan TCGA_RNA-Seq SCML2-MAP7D2 SCML2 chrX 18323091 - MAP7D2 chrX 20082923 - Exonic hg19 BRCA TCGA-AN-A0AM 2 In-Frame Intra-chr p22.13 p22.12 Seq+ 1043 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-E9-A1RA 2 5'UTR-5'UTR Inter-chr p13.2 p22 1044 ChimerSeq FusionScan TCGA_RNA-Seq EEF1A2-DKKL1 EEF1A2 chr20 62121831 - DKKL1 chr19 49877973 + Exonic hg19 BRCA TCGA-D8-A1XD 8 In-Frame Inter-chr q13.33 q13.33 Seq+ 1045 ChimerSeq FusionScan TCGA_RNA-Seq RALY-MAP1LC3A RALY chr20 32581937 + MAP1LC3A chr20 33147011 + Exonic hg19 BRCA TCGA-D8-A1XD 6 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 1046 ChimerSeq FusionScan TCGA_RNA-Seq RALY-MAP1LC3A RALY chr20 32581937 + MAP1LC3A chr20 33147150 + Exonic hg19 BRCA TCGA-D8-A1XD 4 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 1047 ChimerSeq FusionScan TCGA_RNA-Seq TMEM189-KCNC3 TMEM189 chr20 48770053 - KCNC3 chr19 50827339 - Exonic hg19 BRCA TCGA-D8-A1XD 4 Out-of-Frame Inter-chr q13.13 q13.33 Seq+ 1048 ChimerSeq FusionScan TCGA_RNA-Seq TMEM189-KCNC3 TMEM189 chr20 48767748 - KCNC3 chr19 50827339 - Exonic hg19 BRCA TCGA-D8-A1XD 2 3'UTR-CDS Inter-chr q13.13 q13.33 Seq+ 1049 ChimerSeq FusionScan TCGA_RNA-Seq PIH1D1-ALDH16A1 PIH1D1 chr19 49954741 - ALDH16A1 chr19 49961742 + Exonic hg19 BRCA TCGA-D8-A1XD 2 In-Frame Intra-chr q13.33 q13.33 Seq+ 1050 ChimerSeq FusionScan TCGA_RNA-Seq ASH2L-ILF3 ASH2L chr8 37993284 + ILF3 chr19 10787838 + Exonic hg19 BRCA TCGA-D8-A1XD 2 In-Frame Inter-chr p11.23 p13.2 1051 ChimerSeq FusionScan TCGA_RNA-Seq ADNP-ZNF841 ADNP chr20 49545187 - ZNF841 chr19 52570863 - Exonic hg19 BRCA TCGA-D8-A1XD 2 5'UTR-CDS Inter-chr q13.13 Transcription factor q13.41 Transcription factor Seq+ 1052 ChimerSeq FusionScan TCGA_RNA-Seq NFX1-ZNF616 NFX1 chr9 33295425 + ZNF616 chr19 52633841 - Exonic hg19 BRCA TCGA-D8-A1XD 2 CDS-5'UTR Inter-chr p13.3 Transcription factor q13.41 Transcription factor Seq+ 1053 ChimerSeq FusionScan TCGA_RNA-Seq CCM2-PDHA1 CCM2 chr7 45039962 + PDHA1 chrX 19375769 + Exonic hg19 BRCA TCGA-A7-A56D 2 In-Frame Inter-chr p13 p22.12 Seq+ 1054 ChimerSeq FusionScan TCGA_RNA-Seq RARA-PCTP RARA chr17 38474700 + PCTP chr17 53848466 + Exonic hg19 BRCA TCGA-A2-A0D4 3 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 1055 ChimerSeq FusionScan TCGA_RNA-Seq NADSYN1-TRIM9 NADSYN1 chr11 71189515 + TRIM9 chr14 51492078 - Exonic hg19 BRCA TCGA-A2-A0D4 3 In-Frame Inter-chr q13.4 q22.1 Seq+ 1056 ChimerSeq FusionScan TCGA_RNA-Seq PPP3CB-ANXA7 PPP3CB chr10 75214169 - ANXA7 chr10 75147541 - Exonic hg19 BRCA TCGA-AR-A1AI 3 In-Frame Intra-chr q22.2 q22.2 Tumor suppressor gene 1057 ChimerSeq FusionScan TCGA_RNA-Seq CCND3-GUCA1B CCND3 chr6 42016238 - GUCA1B chr6 42156469 - Exonic hg19 BRCA TCGA-AR-A1AI 3 5'UTR-CDS Intra-chr p21.1 p21.1 Seq+ 1058 ChimerSeq FusionScan TCGA_RNA-Seq PAPSS2-LIPJ PAPSS2 chr10 89419765 + LIPJ chr10 90347022 + Exonic hg19 BRCA TCGA-AR-A1AI 3 CDS-5'UTR Intra-chr q23.2 q23.31 Seq+ 1059 ChimerSeq FusionScan TCGA_RNA-Seq PAPSS2-LIPJ PAPSS2 chr10 89419765 + LIPJ chr10 90362332 + Exonic hg19 BRCA TCGA-AR-A1AI 2 In-Frame Intra-chr q23.2 q23.31 Seq+ 1060 ChimerSeq FusionScan TCGA_RNA-Seq TNPO3-RCAN1 TNPO3 chr7 128614921 - RCAN1 chr21 35896008 - Exonic hg19 BRCA TCGA-AR-A1AI 2 Out-of-Frame Inter-chr q32.1 q22.12 Seq+ 1061 ChimerSeq FusionScan TCGA_RNA-Seq ANKFY1-ZZEF1 ANKFY1 chr17 4167226 - ZZEF1 chr17 3970536 - Exonic hg19 BRCA TCGA-AR-A1AI 2 In-Frame Intra-chr p13.2 p13.2 Seq+ 1062 ChimerSeq FusionScan TCGA_RNA-Seq TMEM223-STX5 TMEM223 chr11 62559150 - STX5 chr11 62575100 - Exonic hg19 BRCA TCGA-AN-A0FL 3 Out-of-Frame Intra-chr q12.3 q12.3 Seq+ 1063 ChimerSeq FusionScan TCGA_RNA-Seq KAT6A-ADAM2 KAT6A chr8 41905895 - ADAM2 chr8 39627094 - Exonic hg19 BRCA TCGA-E2-A15A 5 Out-of-Frame Intra-chr p11.21 Oncogene Seq+ 1064 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1L1-FGFR1 WHSC1L1 chr8 38239316 - FGFR1 chr8 38315052 - Exonic hg19 BRCA TCGA-E2-A15A 3 5'UTR-5'UTR Intra-chr p11.23 Tumor suppressor gene p11.23 TK:FGFR Oncogene Seq+ 1065 ChimerSeq FusionScan TCGA_RNA-Seq KAT6A-ADAM2 KAT6A chr8 41905895 - ADAM2 chr8 39624770 - Exonic hg19 BRCA TCGA-E2-A15A 3 In-Frame Intra-chr p11.21 Oncogene Seq+ 1066 ChimerSeq FusionScan TCGA_RNA-Seq KAT6A-ADAM2 KAT6A chr8 41905895 - ADAM2 chr8 39646259 - Exonic hg19 BRCA TCGA-E2-A15A 2 In-Frame Intra-chr p11.21 Oncogene Seq+ 1067 ChimerSeq FusionScan TCGA_RNA-Seq CNOT1-CMC2 CNOT1 chr16 58620448 - CMC2 chr16 81010076 - Exonic hg19 BRCA TCGA-E2-A15A 2 Out-of-Frame Intra-chr q21 q23.2 1068 ChimerSeq FusionScan TCGA_RNA-Seq NUP133-TAF5L NUP133 chr1 229643814 - TAF5L chr1 229738666 - Exonic hg19 BRCA TCGA-A7-A5ZW 2 Out-of-Frame Intra-chr q42.13 q42.13 1069 ChimerSeq FusionScan TCGA_RNA-Seq NXT1-VPS16 NXT1 chr20 23331698 + VPS16 chr20 2840364 + Exonic hg19 BRCA TCGA-E2-A109 5 5'UTR-CDS Intra-chr p11.21 p13 Seq+ 1070 ChimerSeq FusionScan TCGA_RNA-Seq RANBP10-RRP15 RANBP10 chr16 67839330 - RRP15 chr1 218504289 + Exonic hg19 BRCA TCGA-E2-A109 5 Out-of-Frame Inter-chr q22.1 q41 Seq+ 1071 ChimerSeq FusionScan TCGA_RNA-Seq EVPL-MAP2K6 EVPL chr17 74023181 - MAP2K6 chr17 67501920 + Exonic hg19 BRCA TCGA-E2-A109 4 Out-of-Frame Intra-chr q25.1 q24.3 STE:STE7 Seq+ 1072 ChimerSeq FusionScan TCGA_RNA-Seq USP43-ENDOV USP43 chr17 9605017 + ENDOV chr17 78398831 + Exonic hg19 BRCA TCGA-E2-A109 3 Out-of-Frame Intra-chr p13.1 q25.3 Seq+ 1073 ChimerSeq FusionScan TCGA_RNA-Seq UVRAG-PAK1 UVRAG chr11 75827059 + PAK1 chr11 77034405 - Exonic hg19 BRCA TCGA-E2-A109 2 Out-of-Frame Intra-chr q13.5 Tumor suppressor gene q14.1 STE:STE20 Seq+ 1074 ChimerSeq FusionScan TCGA_RNA-Seq ACER3-UVRAG ACER3 chr11 76730820 + UVRAG chr11 75826967 + Exonic hg19 BRCA TCGA-E2-A109 2 In-Frame Intra-chr q13.5 q13.5 Tumor suppressor gene Seq+ 1075 ChimerSeq FusionScan TCGA_RNA-Seq CES2-GPATCH2 CES2 chr16 66972144 + GPATCH2 chr1 217622679 - Exonic hg19 BRCA TCGA-E2-A109 2 In-Frame Inter-chr q22.1 q41 Seq+ 1076 ChimerSeq FusionScan TCGA_RNA-Seq USP22-MYO19 USP22 chr17 20945977 - MYO19 chr17 34852250 - Exonic hg19 BRCA TCGA-BH-A0DD 6 In-Frame Intra-chr p11.2 q12 Seq+ 1077 ChimerSeq FusionScan TCGA_RNA-Seq DENND1B-FAM190A DENND1B chr1 197741997 - FAM190A chr4 91736912 + Exonic hg19 BRCA TCGA-BH-A0DD 5 Out-of-Frame Inter-chr q31.3 Seq+ 1078 ChimerSeq FusionScan TCGA_RNA-Seq SLC39A11-CCL4 SLC39A11 chr17 70943890 - CCL4 chr17 34431920 + Exonic hg19 BRCA TCGA-BH-A0DD 2 In-Frame Intra-chr q25.1 q12 1079 ChimerSeq FusionScan TCGA_RNA-Seq PPFIA1-SLC39A11 PPFIA1 chr11 70172924 + SLC39A11 chr17 71084914 - Exonic hg19 BRCA TCGA-BH-A0DD 2 5'UTR-5'UTR Inter-chr q13.3 q25.1 Seq+ 1080 ChimerSeq FusionScan TCGA_RNA-Seq PPM1H-C12orf56 PPM1H chr12 63060957 - C12orf56 chr12 64671583 - Exonic hg19 BRCA TCGA-BH-A0DD 2 In-Frame Intra-chr q14.2 q14.2 Seq+ 1081 ChimerSeq FusionScan TCGA_RNA-Seq MED24-LINC00469 MED24 chr17 38189308 - LINC00469 chr17 71757165 - Exonic hg19 BRCA TCGA-BH-A0DD 2 CDS-3'UTR Intra-chr q21.1 q25.1 Seq+ 1082 ChimerSeq FusionScan TCGA_RNA-Seq PPFIA1-SLC39A11 PPFIA1 chr11 70172924 + SLC39A11 chr17 71027853 - Exonic hg19 BRCA TCGA-BH-A0DD 2 In-Frame Inter-chr q13.3 q25.1 Seq+ 1083 ChimerSeq FusionScan TCGA_RNA-Seq RARA-TBC1D3B RARA chr17 38474700 + TBC1D3B chr17 34502411 - Exonic hg19 BRCA TCGA-BH-A0DD 2 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor Seq+ 1084 ChimerSeq FusionScan TCGA_RNA-Seq RARA-TBC1D3F RARA chr17 38474700 + TBC1D3F chr17 36285543 + Exonic hg19 BRCA TCGA-BH-A0DD 2 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor q12 1085 ChimerSeq FusionScan TCGA_RNA-Seq NUMA1-AATF NUMA1 chr11 71780887 - AATF chr17 35343915 + Exonic hg19 BRCA TCGA-A8-A08S 4 5'UTR-CDS Inter-chr q13.4 Oncogene Seq+ 1086 ChimerSeq FusionScan TCGA_RNA-Seq NUMA1-AATF NUMA1 chr11 71791503 - AATF chr17 35343915 + Exonic hg19 BRCA TCGA-A8-A08S 2 5'UTR-CDS Inter-chr q13.4 Oncogene Seq+ 1087 ChimerSeq FusionScan TCGA_RNA-Seq LRTOMT-UVRAG LRTOMT chr11 71791931 + UVRAG chr11 75718577 + Exonic hg19 BRCA TCGA-A8-A08S 2 5'UTR-CDS Intra-chr q13.4 q13.5 Tumor suppressor gene Seq+ 1088 ChimerSeq FusionScan TCGA_RNA-Seq FOXP1-EIF4E3 FOXP1 chr3 71542576 - EIF4E3 chr3 71777774 - Exonic hg19 BRCA TCGA-BH-A18V 4 5'UTR-5'UTR Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor p13 Seq+ 1089 ChimerSeq FusionScan TCGA_RNA-Seq MVP-KIF22 MVP chr16 29851780 + KIF22 chr16 29814769 + Exonic hg19 BRCA TCGA-BH-A18V 3 In-Frame Intra-chr p11.2 p11.2 Seq+ 1090 ChimerSeq FusionScan TCGA_RNA-Seq FOXP1-EIF4E3 FOXP1 chr3 71542576 - EIF4E3 chr3 71759635 - Exonic hg19 BRCA TCGA-BH-A18V 2 5'UTR-5'UTR Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor p13 Seq+ 1091 ChimerSeq FusionScan TCGA_RNA-Seq PDE8A-CIB1 PDE8A chr15 85525579 + CIB1 chr15 90776935 - Exonic hg19 BRCA TCGA-B6-A0IO 3 In-Frame Intra-chr q25.3 q26.1 Seq+ 1092 ChimerSeq FusionScan TCGA_RNA-Seq BBS4-TTC23 BBS4 chr15 73024067 + TTC23 chr15 99762069 - Exonic hg19 BRCA TCGA-B6-A0IO 2 Out-of-Frame Intra-chr q24.1 q26.3 Seq+ 1093 ChimerSeq FusionScan TCGA_RNA-Seq BLVRA-ETFA BLVRA chr7 43798333 + ETFA chr15 76566835 - Exonic hg19 BRCA TCGA-B6-A0IO 2 5'UTR-CDS Inter-chr p13 q24.3 1094 ChimerSeq FusionScan TCGA_RNA-Seq PKM2-MCTP2 PKM2 chr15 72509749 - MCTP2 chr15 94942189 + Exonic hg19 BRCA TCGA-B6-A0IO 2 In-Frame Intra-chr q26.2 1095 ChimerSeq FusionScan TCGA_RNA-Seq PDE8A-CIB1 PDE8A chr15 85525579 + CIB1 chr15 90774739 - Exonic hg19 BRCA TCGA-B6-A0IO 2 In-Frame Intra-chr q25.3 q26.1 Seq+ 1096 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-BH-A1EU 2 5'UTR-5'UTR Inter-chr p13.2 p22 1097 ChimerSeq FusionScan TCGA_RNA-Seq RBL2-CTBP2 RBL2 chr16 53468708 + CTBP2 chr10 126727724 - Exonic hg19 BRCA TCGA-AR-A1AQ 2 CDS-5'UTR Inter-chr q12.2 Tumor suppressor gene q26.13 1098 ChimerSeq FusionScan TCGA_RNA-Seq EIF2AK2-CEBPZ EIF2AK2 chr2 37349648 - CEBPZ chr2 37429046 - Exonic hg19 BRCA TCGA-A2-A04P 7 Out-of-Frame Intra-chr p22.2 p22.2 Transcription factor Seq+ 1099 ChimerSeq FusionScan TCGA_RNA-Seq PDE7A-TRIM55 PDE7A chr8 66753605 - TRIM55 chr8 67061879 + Exonic hg19 BRCA TCGA-A2-A04P 6 In-Frame Intra-chr q13.1 q13.1 Seq+ 1100 ChimerSeq FusionScan TCGA_RNA-Seq LRCH3-FYTTD1 LRCH3 chr3 197518411 + FYTTD1 chr3 197508681 + Exonic hg19 BRCA TCGA-A2-A04P 2 Out-of-Frame Intra-chr q29 q29 Seq+ 1101 ChimerSeq FusionScan TCGA_RNA-Seq PDE7A-TRIM55 PDE7A chr8 66753605 - TRIM55 chr8 67062451 + Exonic hg19 BRCA TCGA-A2-A04P 2 In-Frame Intra-chr q13.1 q13.1 Seq+ 1102 ChimerSeq FusionScan TCGA_RNA-Seq FAM168A-RAB6A FAM168A chr11 73308967 - RAB6A chr11 73427407 - Exonic hg19 BRCA TCGA-EW-A1PA 2 5'UTR-CDS Intra-chr q13.4 q13.4 Seq+ 1103 ChimerSeq FusionScan TCGA_RNA-Seq DOCK1-GABARAPL2 DOCK1 chr10 129160476 + GABARAPL2 chr16 75601934 + Exonic hg19 BRCA TCGA-BH-A0BA 2 In-Frame Inter-chr q26.2 q23.1 1104 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BRCA TCGA-LL-A73Z 2 Out-of-Frame Intra-chr q22.2 q22.2 1105 ChimerSeq FusionScan TCGA_RNA-Seq RPAIN-FHIT RPAIN chr17 5326149 + FHIT chr3 59908140 - Exonic hg19 BRCA TCGA-A7-A0CJ 5 Out-of-Frame Inter-chr p13.2 p14.2 Tumor suppressor gene Seq+ 1106 ChimerSeq FusionScan TCGA_RNA-Seq MYH9-FOXRED2 MYH9 chr22 36783851 - FOXRED2 chr22 36886314 - Exonic hg19 BRCA TCGA-A7-A4SE 8 5'UTR-CDS Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Seq+ 1107 ChimerSeq FusionScan TCGA_RNA-Seq ARMC1-PEX19 ARMC1 chr8 66525478 - PEX19 chr1 160249635 - Exonic hg19 BRCA TCGA-A7-A4SE 2 In-Frame Inter-chr q13.1 q23.2 Seq+ 1108 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPF-ATAD1 HNRNPF chr10 43904578 - ATAD1 chr10 89574369 - Exonic hg19 BRCA TCGA-AC-A3EH 6 5'UTR-5'UTR Intra-chr q11.21 Seq+ 1109 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPF-ATAD1 HNRNPF chr10 43903164 - ATAD1 chr10 89574369 - Exonic hg19 BRCA TCGA-AC-A3EH 2 5'UTR-5'UTR Intra-chr q11.21 Seq+ 1110 ChimerSeq FusionScan TCGA_RNA-Seq NCOR2-ITGB5 NCOR2 chr12 125020110 - ITGB5 chr3 124528003 - Exonic hg19 BRCA TCGA-AC-A3EH 2 5'UTR-CDS Inter-chr q24.31 q21.2 Seq+ 1111 ChimerSeq FusionScan TCGA_RNA-Seq UBL3-MTIF3 UBL3 chr13 30423648 - MTIF3 chr13 28019293 - Exonic hg19 BRCA TCGA-A7-A0CE 4 CDS-5'UTR Intra-chr q12.3 q12.2 Seq+ 1112 ChimerSeq FusionScan TCGA_RNA-Seq LPCAT1-CLPTM1L LPCAT1 chr5 1523824 - CLPTM1L chr5 1331998 - Exonic hg19 BRCA TCGA-A7-A0CE 4 In-Frame Intra-chr p15.33 Seq+ 1113 ChimerSeq FusionScan TCGA_RNA-Seq RNF121-CYSLTR2 RNF121 chr11 71671937 + CYSLTR2 chr13 49280950 + Exonic hg19 BRCA TCGA-A7-A0CE 2 5'UTR-5'UTR Inter-chr q13.4 q14.2 Seq+ 1114 ChimerSeq FusionScan TCGA_RNA-Seq SLC39A11-ANXA2 SLC39A11 chr17 70845772 - ANXA2 chr15 60678285 - Exonic hg19 BRCA TCGA-E9-A54X 2 In-Frame Inter-chr q25.1 q22.2 1115 ChimerSeq FusionScan TCGA_RNA-Seq TMED5-HFM1 TMED5 chr1 93645610 - HFM1 chr1 91818709 - Exonic hg19 BRCA TCGA-A2-A1FX 2 Out-of-Frame Intra-chr p22.1 p22.2 Seq+ 1116 ChimerSeq FusionScan TCGA_RNA-Seq AMFR-ITGAM AMFR chr16 56419830 - ITGAM chr16 31332561 + Exonic hg19 BRCA TCGA-D8-A27W 7 5'UTR-CDS Intra-chr q13 p11.2 Seq+ 1117 ChimerSeq FusionScan TCGA_RNA-Seq ZZZ3-CLCA4 ZZZ3 chr1 78148269 - CLCA4 chr1 87025614 + Exonic hg19 BRCA TCGA-D8-A27W 2 5'UTR-5'UTR Intra-chr p31.1 Transcription factor p22.3 1118 ChimerSeq FusionScan TCGA_RNA-Seq MATR3-PCDHA8 MATR3 chr5 138629494 + PCDHA8 chr5 140358533 + Exonic hg19 BRCA TCGA-D8-A27W 2 5'UTR-CDS Intra-chr q31.2 q31.3 1119 ChimerSeq FusionScan TCGA_RNA-Seq SLC44A4-HSPA1L SLC44A4 chr6 31846717 - HSPA1L chr6 31779762 - Exonic hg19 BRCA TCGA-A2-A0YK 2 5'UTR-5'UTR Intra-chr 1120 ChimerSeq FusionScan TCGA_RNA-Seq LRP3-THAP8 LRP3 chr19 33693892 + THAP8 chr19 36531038 - Exonic hg19 BRCA TCGA-BH-A0GY 2 In-Frame Intra-chr q13.11 q13.12 Transcription factor Seq+ 1121 ChimerSeq FusionScan TCGA_RNA-Seq EHBP1-FLJ30838 EHBP1 chr2 63101667 + FLJ30838 chr2 59077564 + Exonic hg19 BRCA TCGA-BH-A0E2 2 CDS-5'UTR Intra-chr p15 Seq+ 1122 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-D8-A1JU 2 5'UTR-5'UTR Inter-chr p13.2 p22 1123 ChimerSeq FusionScan TCGA_RNA-Seq CBY1-GTPBP1 CBY1 chr22 39052755 + GTPBP1 chr22 39111911 + Exonic hg19 BRCA TCGA-E2-A152 6 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 1124 ChimerSeq FusionScan TCGA_RNA-Seq CBY1-GTPBP1 CBY1 chr22 39052755 + GTPBP1 chr22 39104849 + Exonic hg19 BRCA TCGA-E2-A152 6 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 1125 ChimerSeq FusionScan TCGA_RNA-Seq EIF1-MED28 EIF1 chr17 39846193 + MED28 chr4 17621523 + Exonic hg19 BRCA TCGA-D8-A1X5 8 In-Frame Inter-chr q21.2 p15.32 Seq+ 1126 ChimerSeq FusionScan TCGA_RNA-Seq UVRAG-C11orf30 UVRAG chr11 75776832 + C11orf30 chr11 76239311 + Exonic hg19 BRCA TCGA-D8-A1X5 3 In-Frame Intra-chr q13.5 Tumor suppressor gene Seq+ 1127 ChimerSeq FusionScan TCGA_RNA-Seq USP35-TSHZ2 USP35 chr11 77900203 + TSHZ2 chr20 52103682 + Exonic hg19 BRCA TCGA-D8-A1X5 3 5'UTR-3'UTR Inter-chr q14.1 q13.2 Transcription factor Seq+ 1128 ChimerSeq FusionScan TCGA_RNA-Seq LIMCH1-APBB2 LIMCH1 chr4 41526495 + APBB2 chr4 41102767 - Exonic hg19 BRCA TCGA-D8-A1X5 2 CDS-5'UTR Intra-chr p13 p13 Seq+ 1129 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-USP13 TBL1XR1 chr3 176763916 - USP13 chr3 179478899 + Exonic hg19 BRCA TCGA-A8-A07G 10 In-Frame Intra-chr q26.32 q26.33 Seq+ 1130 ChimerSeq FusionScan TCGA_RNA-Seq TBL1Y-USP13 TBL1Y chrY 6942661 + USP13 chr3 179478899 + Exonic hg19 BRCA TCGA-A8-A07G 5 In-Frame Inter-chr p11.2 q26.33 1131 ChimerSeq FusionScan TCGA_RNA-Seq UBE3A-CYP19A1 UBE3A chr15 25650607 - CYP19A1 chr15 51535147 - Exonic hg19 BRCA TCGA-A8-A07G 3 CDS-5'UTR Intra-chr q11.2 q21.2 Seq+ 1132 ChimerSeq FusionScan TCGA_RNA-Seq CPSF3L-MXRA8 CPSF3L chr1 1255835 - MXRA8 chr1 1289612 - Exonic hg19 BRCA TCGA-A8-A07G 2 Out-of-Frame Intra-chr p36.33 Seq+ 1133 ChimerSeq FusionScan TCGA_RNA-Seq RGS3-SLC31A1 RGS3 chr9 116267803 + SLC31A1 chr9 116018393 + Exonic hg19 BRCA TCGA-BH-A0C0 5 CDS-5'UTR Intra-chr q32 q32 Seq+ 1134 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHF2-C8orf38 PLEKHF2 chr8 96146258 + C8orf38 chr8 96053797 + Exonic hg19 BRCA TCGA-BH-A0C0 3 5'UTR-CDS Intra-chr q22.1 Seq+ 1135 ChimerSeq FusionScan TCGA_RNA-Seq SF1-ITPR1 SF1 chr11 64543969 - ITPR1 chr3 4669446 + Exonic hg19 BRCA TCGA-BH-A0C0 3 In-Frame Inter-chr q13.1 p26.1 Seq+ 1136 ChimerSeq FusionScan TCGA_RNA-Seq DEGS2-WARS DEGS2 chr14 100625842 - WARS chr14 100809724 - Exonic hg19 BRCA TCGA-BH-A0C0 3 In-Frame Intra-chr q32.2 q32.2 Seq+ 1137 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-SLC29A3 ERBB2 chr17 37883256 + SLC29A3 chr10 73121710 + Exonic hg19 BRCA TCGA-AR-A254 15 Out-of-Frame Inter-chr q12 Oncogene q22.1 Seq+ 1138 ChimerSeq FusionScan TCGA_RNA-Seq FBXL20-SOCS7 FBXL20 chr17 37557613 - SOCS7 chr17 36551561 + Exonic hg19 BRCA TCGA-AR-A254 5 Out-of-Frame Intra-chr q12 q12 Seq+ 1139 ChimerSeq FusionScan TCGA_RNA-Seq RARA-MSL1 RARA chr17 38487648 + MSL1 chr17 38282435 + Exonic hg19 BRCA TCGA-AR-A254 5 CDS-5'UTR Intra-chr q21.2 Oncogene Transcription factor q21.1 Seq+ 1140 ChimerSeq FusionScan TCGA_RNA-Seq FAM217B-PRPF6 FAM217B chr20 58515590 + PRPF6 chr20 62657291 + Exonic hg19 BRCA TCGA-AR-A254 4 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 1141 ChimerSeq FusionScan TCGA_RNA-Seq CASZ1-PALM CASZ1 chr1 10765548 - PALM chr19 726137 + Exonic hg19 BRCA TCGA-AR-A254 2 5'UTR-CDS Inter-chr p36.22 Transcription factor p13.3 1142 ChimerSeq FusionScan TCGA_RNA-Seq HIF1A-MNAT1 HIF1A chr14 62162557 + MNAT1 chr14 61262934 + Exonic hg19 BRCA TCGA-D8-A1JL 7 In-Frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 Seq+ 1143 ChimerSeq FusionScan TCGA_RNA-Seq CHD7-CCDC58 CHD7 chr8 61743136 + CCDC58 chr3 122081874 - Exonic hg19 BRCA TCGA-D8-A1JL 4 Out-of-Frame Inter-chr q12.2 q21.1 Seq+ 1144 ChimerSeq FusionScan TCGA_RNA-Seq CEP70-STAG1 CEP70 chr3 138289159 - STAG1 chr3 136287703 - Exonic hg19 BRCA TCGA-D8-A1JL 2 In-Frame Intra-chr q22.3 q22.3 Seq+ 1145 ChimerSeq FusionScan TCGA_RNA-Seq HSPA9-ARL15 HSPA9 chr5 137903143 - ARL15 chr5 53182543 - Exonic hg19 BRCA TCGA-D8-A1JL 2 Out-of-Frame Intra-chr q31.2 q11.2 Seq+ 1146 ChimerSeq FusionScan TCGA_RNA-Seq ZNF587-ZSCAN4 ZNF587 chr19 58361439 + ZSCAN4 chr19 58187408 + Exonic hg19 BRCA TCGA-A2-A04X 5 CDS-5'UTR Intra-chr q13.43 Transcription factor q13.43 Transcription factor Seq+ 1147 ChimerSeq FusionScan TCGA_RNA-Seq SNX27-ADAR SNX27 chr1 151611595 + ADAR chr1 154575102 - Exonic hg19 BRCA TCGA-A2-A04X 2 In-Frame Intra-chr q21.3 q21.3 Seq+ 1148 ChimerSeq FusionScan TCGA_RNA-Seq PNKP-C19orf57 PNKP chr19 50369655 - C19orf57 chr19 13996868 - Exonic hg19 BRCA TCGA-E2-A2P6 2 In-Frame Intra-chr q13.33 p13.12 1149 ChimerSeq FusionScan TCGA_RNA-Seq MYSM1-ALG14 MYSM1 chr1 59165656 - ALG14 chr1 95448862 - Exonic hg19 BRCA TCGA-A7-A5ZV 2 Out-of-Frame Intra-chr p32.1 Transcription factor p21.3 Seq+ 1150 ChimerSeq FusionScan TCGA_RNA-Seq ACBD3-DERL1 ACBD3 chr1 226374090 - DERL1 chr8 124037290 - Exonic hg19 BRCA TCGA-A7-A5ZV 2 In-Frame Inter-chr q42.12 q24.13 1151 ChimerSeq FusionScan TCGA_RNA-Seq MRPL27-TMEM99 MRPL27 chr17 48450491 - TMEM99 chr17 38989366 + Exonic hg19 BRCA TCGA-A8-A092 3 CDS-5'UTR Intra-chr q21.33 q21.2 Seq+ 1152 ChimerSeq FusionScan TCGA_RNA-Seq ZFP91-RAB6A ZFP91 chr11 58352357 + RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-A8-A092 3 Out-of-Frame Intra-chr q12.1 Transcription factor q13.4 Seq+ 1153 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-PRKAG2 MLL3 chr7 151960100 - PRKAG2 chr7 151273538 - Exonic hg19 BRCA TCGA-A8-A06X 3 In-Frame Intra-chr Tumor suppressor gene q36.1 Seq+ 1154 ChimerSeq FusionScan TCGA_RNA-Seq CRLS1-SEL1L2 CRLS1 chr20 5990558 + SEL1L2 chr20 13899769 - Exonic hg19 BRCA TCGA-A8-A06X 2 Out-of-Frame Intra-chr p12.3 p12.1 Seq+ 1155 ChimerSeq FusionScan TCGA_RNA-Seq IMMP1L-NAB1 IMMP1L chr11 31531065 - NAB1 chr2 191520702 + Exonic hg19 BRCA TCGA-A8-A06X 2 5'UTR-5'UTR Inter-chr p13 q32.2 1156 ChimerSeq FusionScan TCGA_RNA-Seq VKORC1L1-GUSB VKORC1L1 chr7 65338552 + GUSB chr7 65435353 - Exonic hg19 BRCA TCGA-A8-A07R 4 In-Frame Intra-chr q11.21 q11.21 Seq+ 1157 ChimerSeq FusionScan TCGA_RNA-Seq ADIPOR2-ERC1 ADIPOR2 chr12 1800357 + ERC1 chr12 1372199 + Exonic hg19 BRCA TCGA-A8-A07R 2 5'UTR-5'UTR Intra-chr p13.33 Seq+ 1158 ChimerSeq FusionScan TCGA_RNA-Seq PLXDC2-SYNE1 PLXDC2 chr10 20290915 + SYNE1 chr6 152793548 - Exonic hg19 BRCA TCGA-A8-A07R 2 In-Frame Inter-chr p12.31 q25.2 Oncogene Seq+ 1159 ChimerSeq FusionScan TCGA_RNA-Seq BIN3-PEBP4 BIN3 chr8 22526556 - PEBP4 chr8 22584733 - Exonic hg19 BRCA TCGA-E9-A22E 7 Out-of-Frame Intra-chr p21.3 p21.3 Seq+ 1160 ChimerSeq FusionScan TCGA_RNA-Seq MAP3K1-PARN MAP3K1 chr5 56111882 + PARN chr16 14540938 - Exonic hg19 BRCA TCGA-E9-A22E 6 In-Frame Inter-chr q11.2 STE:STE11 Oncogene Seq+ 1161 ChimerSeq FusionScan TCGA_RNA-Seq CLCN3-SMAD1 CLCN3 chr4 170557239 + SMAD1 chr4 146474935 + Exonic hg19 BRCA TCGA-AN-A04C 6 In-Frame Intra-chr q33 q31.21 Transcription factor Seq+ 1162 ChimerSeq FusionScan TCGA_RNA-Seq PALLD-NAA15 PALLD chr4 169589519 + NAA15 chr4 140291364 + Exonic hg19 BRCA TCGA-AN-A04C 6 In-Frame Intra-chr q32.3 q31.1 Seq+ 1163 ChimerSeq FusionScan TCGA_RNA-Seq UTRN-PERP UTRN chr6 144898424 + PERP chr6 138417631 - Exonic hg19 BRCA TCGA-AN-A04C 6 Out-of-Frame Intra-chr q24.2 q23.3 Seq+ 1164 ChimerSeq FusionScan TCGA_RNA-Seq UBE2Z-ZNF652 UBE2Z chr17 46998634 + ZNF652 chr17 47395345 - Exonic hg19 BRCA TCGA-AN-A04C 4 CDS-5'UTR Intra-chr q21.32 q21.33 Transcription factor Seq+ 1165 ChimerSeq FusionScan TCGA_RNA-Seq ATG5-QRSL1 ATG5 chr6 106727535 - QRSL1 chr6 107113656 + Exonic hg19 BRCA TCGA-AN-A04C 3 In-Frame Intra-chr q21 q21 Seq+ 1166 ChimerSeq FusionScan TCGA_RNA-Seq PCTP-CALCOCO2 PCTP chr17 53828605 + CALCOCO2 chr17 46937675 + Exonic hg19 BRCA TCGA-AN-A04C 2 In-Frame Intra-chr q22 q21.32 Seq+ 1167 ChimerSeq FusionScan TCGA_RNA-Seq COX6B1-SERTAD1 COX6B1 chr19 36142251 + SERTAD1 chr19 40929453 - Exonic hg19 BRCA TCGA-AN-A04C 2 CDS-5'UTR Intra-chr q13.12 q13.2 Seq+ 1168 ChimerSeq FusionScan TCGA_RNA-Seq FAM160A1-IL15 FAM160A1 chr4 152510078 + IL15 chr4 142653890 + Exonic hg19 BRCA TCGA-AN-A04C 2 In-Frame Intra-chr q31.3 q31.21 Seq+ 1169 ChimerSeq FusionScan TCGA_RNA-Seq RBL1-CTNNBL1 RBL1 chr20 35717391 - CTNNBL1 chr20 36500326 + Exonic hg19 BRCA TCGA-AO-A03M 4 Out-of-Frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 1170 ChimerSeq FusionScan TCGA_RNA-Seq SAMHD1-DDX27 SAMHD1 chr20 35526224 - DDX27 chr20 47852869 + Exonic hg19 BRCA TCGA-AO-A03M 2 In-Frame Intra-chr q11.23 q13.13 Seq+ 1171 ChimerSeq FusionScan TCGA_RNA-Seq TRIM24-SVOPL TRIM24 chr7 138258387 + SVOPL chr7 138281275 - Exonic hg19 BRCA TCGA-C8-A1HM 5 Out-of-Frame Intra-chr q33 Oncogene Tumor suppressor gene q34 Seq+ 1172 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-A8-A095 3 5'UTR-5'UTR Inter-chr p13.2 p22 1173 ChimerSeq FusionScan TCGA_RNA-Seq ACBD3-PARP1 ACBD3 chr1 226374090 - PARP1 chr1 226580015 - Exonic hg19 BRCA TCGA-A8-A095 2 In-Frame Intra-chr q42.12 q42.12 Oncogene Tumor suppressor gene 1174 ChimerSeq FusionScan TCGA_RNA-Seq CLK1-HSPD1 CLK1 chr2 201725960 - HSPD1 chr2 198353971 - Exonic hg19 BRCA TCGA-B6-A0I2 2 In-Frame Intra-chr q33.1 CMGC:CLK q33.1 Tumor suppressor gene 1175 ChimerSeq FusionScan TCGA_RNA-Seq SMARCC1-MAP4 SMARCC1 chr3 47755904 - MAP4 chr3 47912776 - Exonic hg19 BRCA TCGA-OL-A5D7 4 Out-of-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 1176 ChimerSeq FusionScan TCGA_RNA-Seq FRYL-DTD1 FRYL chr4 48621290 - DTD1 chr20 18724743 + Exonic hg19 BRCA TCGA-OL-A5D7 3 In-Frame Inter-chr p11 p11.23 Seq+ 1177 ChimerSeq FusionScan TCGA_RNA-Seq MTMR1-HS1BP3 MTMR1 chrX 149924337 + HS1BP3 chr2 20840940 - Exonic hg19 BRCA TCGA-OL-A5D7 3 In-Frame Inter-chr q28 p24.1 Seq+ 1178 ChimerSeq FusionScan TCGA_RNA-Seq SOGA1-SAMHD1 SOGA1 chr20 35457456 - SAMHD1 chr20 35547922 - Exonic hg19 BRCA TCGA-OL-A5D7 2 In-Frame Intra-chr q11.23 q11.23 Seq+ 1179 ChimerSeq FusionScan TCGA_RNA-Seq STK11-KDM4B STK11 chr19 1207202 + KDM4B chr19 5032876 + Exonic hg19 BRCA TCGA-OL-A5D7 2 CDS-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 1180 ChimerSeq FusionScan TCGA_RNA-Seq FIP1L1-SBNO2 FIP1L1 chr4 54292132 + SBNO2 chr19 1113703 - Exonic hg19 BRCA TCGA-OL-A5D7 2 Out-of-Frame Inter-chr q12 p13.3 Seq+ 1181 ChimerSeq FusionScan TCGA_RNA-Seq MAN1A2-CD101 MAN1A2 chr1 118009049 + CD101 chr1 117576481 + Exonic hg19 BRCA TCGA-OL-A5D7 2 In-Frame Intra-chr p12 p13.1 Seq+ 1182 ChimerSeq FusionScan TCGA_RNA-Seq EVI5L-VAV1 EVI5L chr19 7923217 + VAV1 chr19 6843145 + Exonic hg19 BRCA TCGA-AQ-A54N 4 In-Frame Intra-chr p13.2 p13.3 Seq+ 1183 ChimerSeq FusionScan TCGA_RNA-Seq SPINT2-LGALS7B SPINT2 chr19 38755638 + LGALS7B chr19 39280255 + Exonic hg19 BRCA TCGA-AQ-A54N 2 Out-of-Frame Intra-chr q13.2 Tumor suppressor gene Seq+ 1184 ChimerSeq FusionScan TCGA_RNA-Seq WFDC2-PI3 WFDC2 chr20 44099172 + PI3 chr20 43804501 + Exonic hg19 BRCA TCGA-AQ-A54N 2 In-Frame Intra-chr q13.12 q13.12 Seq+ 1185 ChimerSeq FusionScan TCGA_RNA-Seq SKA2-TRIM37 SKA2 chr17 57232491 - TRIM37 chr17 57161450 - Exonic hg19 BRCA TCGA-AR-A24R 2 Out-of-Frame Intra-chr q22 q22 1186 ChimerSeq FusionScan TCGA_RNA-Seq VMP1-C17orf64 VMP1 chr17 57851246 + C17orf64 chr17 58503143 + Exonic hg19 BRCA TCGA-AR-A24R 2 In-Frame Intra-chr q23.1 q23.2 Seq+ 1187 ChimerSeq FusionScan TCGA_RNA-Seq AURKA-PCK1 AURKA chr20 54963211 - PCK1 chr20 56136427 + Exonic hg19 BRCA TCGA-AR-A24R 2 CDS-5'UTR Intra-chr q13.2 Oncogene q13.31 Seq+ 1188 ChimerSeq FusionScan TCGA_RNA-Seq PDS5B-UBR2 PDS5B chr13 33160730 + UBR2 chr6 42658769 + Exonic hg19 BRCA TCGA-AR-A24R 2 5'UTR-CDS Inter-chr q13.1 Tumor suppressor gene p21.1 Seq+ 1189 ChimerSeq FusionScan TCGA_RNA-Seq SLC12A8-BFSP2 SLC12A8 chr3 124930142 - BFSP2 chr3 133169146 + Exonic hg19 BRCA TCGA-D8-A1XR 5 In-Frame Intra-chr q21.2 q22.1 Seq+ 1190 ChimerSeq FusionScan TCGA_RNA-Seq TSKU-SFRP4 TSKU chr11 76494448 + SFRP4 chr7 37954055 - Exonic hg19 BRCA TCGA-A8-A091 4 5'UTR-CDS Inter-chr q13.5 p14.1 Tumor suppressor gene Seq+ 1191 ChimerSeq FusionScan TCGA_RNA-Seq C11orf30-BBS9 C11orf30 chr11 76207513 + BBS9 chr7 33195249 + Exonic hg19 BRCA TCGA-A8-A091 3 Out-of-Frame Inter-chr p14.3 Seq+ 1192 ChimerSeq FusionScan TCGA_RNA-Seq NCOA5-CDH4 NCOA5 chr20 44718455 - CDH4 chr20 60318618 + Exonic hg19 BRCA TCGA-A8-A091 3 5'UTR-5'UTR Intra-chr q13.12 Tumor suppressor gene q13.33 Tumor suppressor gene Seq+ 1193 ChimerSeq FusionScan TCGA_RNA-Seq NCOA5-CDH4 NCOA5 chr20 44708025 - CDH4 chr20 60318618 + Exonic hg19 BRCA TCGA-A8-A091 2 Out-of-Frame Intra-chr q13.12 Tumor suppressor gene q13.33 Tumor suppressor gene Seq+ 1194 ChimerSeq FusionScan TCGA_RNA-Seq C2CD3-ABCA13 C2CD3 chr11 73843888 - ABCA13 chr7 48520632 + Exonic hg19 BRCA TCGA-A8-A091 2 Out-of-Frame Inter-chr q13.4 p12.3 Seq+ 1195 ChimerSeq FusionScan TCGA_RNA-Seq DCK-GRSF1 DCK chr4 71863899 + GRSF1 chr4 71702031 - Exonic hg19 BRCA TCGA-BH-A1F2 3 In-Frame Intra-chr q13.3 q13.3 Seq+ 1196 ChimerSeq FusionScan TCGA_RNA-Seq NEDD9-RNF13 NEDD9 chr6 11232736 - RNF13 chr3 149677842 + Exonic hg19 BRCA TCGA-BH-A1F2 2 Out-of-Frame Inter-chr p24.2 q25.1 1197 ChimerSeq FusionScan TCGA_RNA-Seq ADNP2-PQLC1 ADNP2 chr18 77875533 + PQLC1 chr18 77703462 - Exonic hg19 BRCA TCGA-BH-A1F2 2 Out-of-Frame Intra-chr q23 Transcription factor q23 Seq+ 1198 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-BH-A0DT 2 5'UTR-5'UTR Inter-chr p13.2 p22 1199 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1L1-PSD3 WHSC1L1 chr8 38146004 - PSD3 chr8 18513195 - Exonic hg19 BRCA TCGA-BH-A18U 5 In-Frame Intra-chr p11.23 Tumor suppressor gene p22 Seq+ 1200 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-BH-A18U 4 5'UTR-5'UTR Inter-chr p13.2 p22 1201 ChimerSeq FusionScan TCGA_RNA-Seq KDM4B-UBXN6 KDM4B chr19 4969241 + UBXN6 chr19 4447622 - Exonic hg19 BRCA TCGA-BH-A18U 4 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 1202 ChimerSeq FusionScan TCGA_RNA-Seq RAD54L2-ERC2 RAD54L2 chr3 51575666 + ERC2 chr3 55545304 - Exonic hg19 BRCA TCGA-BH-A18U 3 5'UTR-3'UTR Intra-chr p21.2 p14.3 Seq+ 1203 ChimerSeq FusionScan TCGA_RNA-Seq BZW2-CLCN3 BZW2 chr7 16685913 + CLCN3 chr4 170601200 + Exonic hg19 BRCA TCGA-BH-A18U 3 5'UTR-CDS Inter-chr p21.1 q33 Seq+ 1204 ChimerSeq FusionScan TCGA_RNA-Seq ZZEF1-CCDC144A ZZEF1 chr17 3928212 - CCDC144A chr17 16610782 + Exonic hg19 BRCA TCGA-BH-A18U 2 Out-of-Frame Intra-chr p13.2 p11.2 Seq+ 1205 ChimerSeq FusionScan TCGA_RNA-Seq CNOT2-NUP107 CNOT2 chr12 70637260 + NUP107 chr12 69090598 + Exonic hg19 BRCA TCGA-A8-A08F 5 5'UTR-CDS Intra-chr q15 q15 Seq+ 1206 ChimerSeq FusionScan TCGA_RNA-Seq TAF6L-GLYATL1 TAF6L chr11 62538962 + GLYATL1 chr11 58722242 + Exonic hg19 BRCA TCGA-A8-A08F 2 5'UTR-CDS Intra-chr q12.3 q12.1 Seq+ 1207 ChimerSeq FusionScan TCGA_RNA-Seq FAM160B1-ATP2A2 FAM160B1 chr10 116606126 + ATP2A2 chr12 110770401 + Exonic hg19 BRCA TCGA-A8-A08F 2 In-Frame Inter-chr q25.3 q24.11 1208 ChimerSeq FusionScan TCGA_RNA-Seq NUMA1-PITPNM1 NUMA1 chr11 71718234 - PITPNM1 chr11 67265793 - Exonic hg19 BRCA TCGA-E2-A107 4 Out-of-Frame Intra-chr q13.4 Oncogene q13.2 Seq+ 1209 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-E2-A107 2 5'UTR-5'UTR Inter-chr p13.2 p22 1210 ChimerSeq FusionScan TCGA_RNA-Seq RARA-C16orf45 RARA chr17 38487648 + C16orf45 chr16 15609161 + Exonic hg19 BRCA TCGA-AN-A046 2 In-Frame Inter-chr q21.2 Oncogene Transcription factor 1211 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-AN-A046 2 5'UTR-5'UTR Inter-chr p13.2 p22 1212 ChimerSeq FusionScan TCGA_RNA-Seq MPP5-GPHN MPP5 chr14 67708250 + GPHN chr14 67610078 + Exonic hg19 BRCA TCGA-A2-A0YM 6 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 1213 ChimerSeq FusionScan TCGA_RNA-Seq RGL3-ECSIT RGL3 chr19 11510530 - ECSIT chr19 11617243 - Exonic hg19 BRCA TCGA-A2-A0YM 2 Out-of-Frame Intra-chr p13.2 p13.2 Seq+ 1214 ChimerSeq FusionScan TCGA_RNA-Seq TAF4B-CHST9 TAF4B chr18 23807240 + CHST9 chr18 24628467 - Exonic hg19 BRCA TCGA-A2-A0YM 2 In-Frame Intra-chr q11.2 q11.2 Seq+ 1215 ChimerSeq FusionScan TCGA_RNA-Seq ZNF587B-NEK9 ZNF587B chr19 58350517 + NEK9 chr14 75573405 - Exonic hg19 BRCA TCGA-BH-A18S 2 In-Frame Inter-chr q13.43 Transcription factor q24.3 Other:NEK 1216 ChimerSeq FusionScan TCGA_RNA-Seq RAB6A-ZNF705D RAB6A chr11 73471610 - ZNF705D chr8 11965631 + Exonic hg19 BRCA TCGA-BH-A0B1 6 CDS-5'UTR Inter-chr q13.4 p23.1 Transcription factor 1217 ChimerSeq FusionScan TCGA_RNA-Seq CHRNB3-RB1CC1 CHRNB3 chr8 42565577 + RB1CC1 chr8 53558427 - Exonic hg19 BRCA TCGA-BH-A0B1 4 Out-of-Frame Intra-chr p11.21 q11.23 Tumor suppressor gene Seq+ 1218 ChimerSeq FusionScan TCGA_RNA-Seq MBTD1-UTP18 MBTD1 chr17 49336503 - UTP18 chr17 49343542 + Exonic hg19 BRCA TCGA-BH-A0B1 4 5'UTR-CDS Intra-chr q21.33 q21.33 Seq+ 1219 ChimerSeq FusionScan TCGA_RNA-Seq C3orf26-PLOD2 C3orf26 chr3 99536887 + PLOD2 chr3 145828235 - Exonic hg19 BRCA TCGA-BH-A0B1 2 Out-of-Frame Intra-chr q24 1220 ChimerSeq FusionScan TCGA_RNA-Seq NME2-CEP112 NME2 chr17 49243042 + CEP112 chr17 63637183 - Exonic hg19 BRCA TCGA-AO-A0JM 2 5'UTR-CDS Intra-chr q21.33 Transcription factor q24.1 Seq+ 1221 ChimerSeq FusionScan TCGA_RNA-Seq XRRA1-RNF169 XRRA1 chr11 74559159 - RNF169 chr11 74545720 + Exonic hg19 BRCA TCGA-BH-A0BD 5 Out-of-Frame Intra-chr q13.4 q13.4 Seq+ 1222 ChimerSeq FusionScan TCGA_RNA-Seq EPC1-PTGR2 EPC1 chr10 32635690 - PTGR2 chr14 74340725 + Exonic hg19 BRCA TCGA-BH-A0C7 4 In-Frame Inter-chr p11.22 q24.3 Seq+ 1223 ChimerSeq FusionScan TCGA_RNA-Seq NEMF-ZNF558 NEMF chr14 50318280 - ZNF558 chr19 8923898 - Exonic hg19 BRCA TCGA-BH-A0C7 2 Out-of-Frame Inter-chr q21.3 p13.2 Transcription factor 1224 ChimerSeq FusionScan TCGA_RNA-Seq TRIP12-SLC4A10 TRIP12 chr2 230701563 - SLC4A10 chr2 162820644 + Exonic hg19 BRCA TCGA-BH-A0C7 2 Out-of-Frame Intra-chr q36.3 q24.2 Seq+ 1225 ChimerSeq FusionScan TCGA_RNA-Seq MRPL45-LRRC37A MRPL45 chr17 36455434 + LRRC37A chr17 44399687 + Exonic hg19 BRCA TCGA-A2-A0D1 2 CDS-5'UTR Intra-chr q12 1226 ChimerSeq FusionScan TCGA_RNA-Seq ZNRF3-ASCC2 ZNRF3 chr22 29280054 + ASCC2 chr22 30221246 - Exonic hg19 BRCA TCGA-A8-A094 6 In-Frame Intra-chr q12.1 q12.2 Seq+ 1227 ChimerSeq FusionScan TCGA_RNA-Seq ZFYVE26-RAD51B ZFYVE26 chr14 68283250 - RAD51B chr14 68878140 + Exonic hg19 BRCA TCGA-A8-A094 2 5'UTR-CDS Intra-chr q24.1 q24.1 Seq+ 1228 ChimerSeq FusionScan TCGA_RNA-Seq ZNF544-SENP6 ZNF544 chr19 58741828 + SENP6 chr6 76385575 + Exonic hg19 BRCA TCGA-A8-A094 2 5'UTR-CDS Inter-chr q13.43 Transcription factor q14.1 Seq+ 1229 ChimerSeq FusionScan TCGA_RNA-Seq ZNRF3-ASCC2 ZNRF3 chr22 29280054 + ASCC2 chr22 30221769 - Exonic hg19 BRCA TCGA-A8-A094 2 In-Frame Intra-chr q12.1 q12.2 Seq+ 1230 ChimerSeq FusionScan TCGA_RNA-Seq TLK1-SSB TLK1 chr2 171939290 - SSB chr2 170661983 + Exonic hg19 BRCA TCGA-A8-A094 2 In-Frame Intra-chr q31.1 Other:TLK q31.1 Seq+ 1231 ChimerSeq FusionScan TCGA_RNA-Seq SEC16A-QSOX2 SEC16A chr9 139353585 - QSOX2 chr9 139103298 - Exonic hg19 BRCA TCGA-A8-A094 2 Out-of-Frame Intra-chr q34.3 q34.3 Seq+ 1232 ChimerSeq FusionScan TCGA_RNA-Seq EHMT1-ARRDC1 EHMT1 chr9 140513501 + ARRDC1 chr9 140507347 + Exonic hg19 BRCA TCGA-PL-A8LZ 4 Out-of-Frame Intra-chr q34.3 q34.3 Seq+ 1233 ChimerSeq FusionScan TCGA_RNA-Seq TRAPPC10-BRWD1 TRAPPC10 chr21 45432441 + BRWD1 chr21 40630598 - Exonic hg19 BRCA TCGA-E2-A1LG 6 In-Frame Intra-chr q22.3 q22.2 Seq+ 1234 ChimerSeq FusionScan TCGA_RNA-Seq DSCR3-IGSF5 DSCR3 chr21 38639538 - IGSF5 chr21 41137461 + Exonic hg19 BRCA TCGA-E2-A1LG 2 Out-of-Frame Intra-chr q22.13 q22.2 Seq+ 1235 ChimerSeq FusionScan TCGA_RNA-Seq WWP1-CPB2 WWP1 chr8 87474075 + CPB2 chr13 46661955 - Exonic hg19 BRCA TCGA-E2-A1LG 2 In-Frame Inter-chr q21.3 q14.13 Seq+ 1236 ChimerSeq FusionScan TCGA_RNA-Seq ERO1L-HECTD1 ERO1L chr14 53138347 - HECTD1 chr14 31572272 - Exonic hg19 BRCA TCGA-D8-A3Z5 2 In-Frame Intra-chr q12 1237 ChimerSeq FusionScan TCGA_RNA-Seq PPIF-REEP3 PPIF chr10 81107499 + REEP3 chr10 65354537 + Exonic hg19 BRCA TCGA-AN-A0AJ 11 In-Frame Intra-chr q22.3 q21.3 Seq+ 1238 ChimerSeq FusionScan TCGA_RNA-Seq CD151-MIPEP CD151 chr11 833026 + MIPEP chr13 24334356 - Exonic hg19 BRCA TCGA-AN-A0AJ 5 5'UTR-CDS Inter-chr p15.5 q12.12 Seq+ 1239 ChimerSeq FusionScan TCGA_RNA-Seq GRHL2-FAM213A GRHL2 chr8 102505017 + FAM213A chr10 82191741 + Exonic hg19 BRCA TCGA-AN-A0AJ 4 Out-of-Frame Inter-chr q22.3 Transcription factor q23.1 Seq+ 1240 ChimerSeq FusionScan TCGA_RNA-Seq RAB6A-MRPL48 RAB6A chr11 73471610 - MRPL48 chr11 73516071 + Exonic hg19 BRCA TCGA-AN-A0AJ 3 Out-of-Frame Intra-chr q13.4 q13.4 Seq+ 1241 ChimerSeq FusionScan TCGA_RNA-Seq RAB3GAP2-SRGAP2P2 RAB3GAP2 chr1 220406140 - SRGAP2P2 chr1 144094361 + Exonic hg19 BRCA TCGA-AN-A0AJ 2 CDS-5'UTR Intra-chr q41 1242 ChimerSeq FusionScan TCGA_RNA-Seq ADK-KCNMA1 ADK chr10 76074503 + KCNMA1 chr10 79011014 - Exonic hg19 BRCA TCGA-AN-A0AJ 2 In-Frame Intra-chr q22.2 q22.3 Seq+ 1243 ChimerSeq FusionScan TCGA_RNA-Seq ZDHHC5-LCT ZDHHC5 chr11 57440666 + LCT chr2 136555708 - Exonic hg19 BRCA TCGA-AN-A0AJ 2 Out-of-Frame Inter-chr q12.1 q21.3 Seq+ 1244 ChimerSeq FusionScan TCGA_RNA-Seq MYSM1-INADL MYSM1 chr1 59165656 - INADL chr1 62253425 + Exonic hg19 BRCA TCGA-AN-A0AJ 2 Out-of-Frame Intra-chr p32.1 Transcription factor 1245 ChimerSeq FusionScan TCGA_RNA-Seq TOPBP1-NEK11 TOPBP1 chr3 133356719 - NEK11 chr3 131068400 + Exonic hg19 BRCA TCGA-A8-A06U 5 Out-of-Frame Intra-chr q22.1 q22.1 Other:NEK Seq+ 1246 ChimerSeq FusionScan TCGA_RNA-Seq ATP6V1A-OPA1 ATP6V1A chr3 113465960 + OPA1 chr3 193349400 + Exonic hg19 BRCA TCGA-A8-A06U 4 5'UTR-CDS Intra-chr q13.31 q29 Seq+ 1247 ChimerSeq FusionScan TCGA_RNA-Seq FLJ43663-RCHY1 FLJ43663 chr7 130792478 - RCHY1 chr4 76434506 - Exonic hg19 BRCA TCGA-A8-A06U 3 3'UTR-3'UTR Inter-chr q21.1 Tumor suppressor gene 1248 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB20-CD96 ZBTB20 chr3 114866065 - CD96 chr3 111366389 + Exonic hg19 BRCA TCGA-A8-A06U 3 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.13 Seq+ 1249 ChimerSeq FusionScan TCGA_RNA-Seq CHD2-HOMER2 CHD2 chr15 93496803 + HOMER2 chr15 83533011 - Exonic hg19 BRCA TCGA-A8-A06U 2 In-Frame Intra-chr q26.1 q25.2 Tumor suppressor gene Seq+ 1250 ChimerSeq FusionScan TCGA_RNA-Seq KIF13B-EPN2 KIF13B chr8 29102862 - EPN2 chr17 19185267 + Exonic hg19 BRCA TCGA-B6-A0WV 6 CDS-5'UTR Inter-chr p12 p11.2 Seq+ 1251 ChimerSeq FusionScan TCGA_RNA-Seq PRKAG2-CCDC132 PRKAG2 chr7 151573591 - CCDC132 chr7 92970738 + Exonic hg19 BRCA TCGA-B6-A2IU 2 In-Frame Intra-chr q36.1 Seq+ 1252 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-AR-A1AL 3 5'UTR-5'UTR Inter-chr p13.2 p22 1253 ChimerSeq FusionScan TCGA_RNA-Seq ZNF701-PSMA7 ZNF701 chr19 53073583 + PSMA7 chr20 60716000 - Exonic hg19 BRCA TCGA-UL-AAZ6 9 5'UTR-CDS Inter-chr q13.41 Transcription factor q13.33 Seq+ 1254 ChimerSeq FusionScan TCGA_RNA-Seq CYFIP1-ACACA CYFIP1 chr15 22935964 + ACACA chr17 35634007 - Exonic hg19 BRCA TCGA-UL-AAZ6 3 In-Frame Inter-chr q11.2 Seq+ 1255 ChimerSeq FusionScan TCGA_RNA-Seq RIMS2-ODF1 RIMS2 chr8 104513290 + ODF1 chr8 103572679 + Exonic hg19 BRCA TCGA-E9-A22B 3 In-Frame Intra-chr q22.3 q22.3 Seq+ 1256 ChimerSeq FusionScan TCGA_RNA-Seq ARL17B-LINC00152 ARL17B chr17 44430185 - LINC00152 chr2 87820725 + Exonic hg19 BRCA TCGA-E9-A22B 2 3'UTR-5'UTR Inter-chr 1257 ChimerSeq FusionScan TCGA_RNA-Seq PLOD1-NOC4L PLOD1 chr1 11994912 + NOC4L chr12 132635802 + Exonic hg19 BRCA TCGA-E9-A22B 2 Out-of-Frame Inter-chr p36.22 q24.33 1258 ChimerSeq FusionScan TCGA_RNA-Seq ARID4B-PCNXL2 ARID4B chr1 235420474 - PCNXL2 chr1 233314921 - Exonic hg19 BRCA TCGA-OL-A5D8 3 In-Frame Intra-chr q42.3 Seq+ 1259 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-OL-A5D8 2 5'UTR-5'UTR Inter-chr p13.2 p22 1260 ChimerSeq FusionScan TCGA_RNA-Seq MPP5-RDH11 MPP5 chr14 67708250 + RDH11 chr14 68151921 - Exonic hg19 BRCA TCGA-E2-A1LL 4 5'UTR-CDS Intra-chr q23.3 q24.1 Seq+ 1261 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0528-ITPR2 KIAA0528 chr12 22666227 - ITPR2 chr12 26493261 - Exonic hg19 BRCA TCGA-E2-A1LL 4 In-Frame Intra-chr p11.23 Seq+ 1262 ChimerSeq FusionScan TCGA_RNA-Seq SS18L1-CDH4 SS18L1 chr20 60718945 + CDH4 chr20 60469965 + Exonic hg19 BRCA TCGA-E2-A1LL 4 In-Frame Intra-chr q13.33 q13.33 Tumor suppressor gene Seq+ 1263 ChimerSeq FusionScan TCGA_RNA-Seq NF1-RAB11FIP4 NF1 chr17 29422387 + RAB11FIP4 chr17 29758830 + Exonic hg19 BRCA TCGA-E2-A1LL 3 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 1264 ChimerSeq FusionScan TCGA_RNA-Seq LCOR-CPNE8 LCOR chr10 98593236 + CPNE8 chr12 39096723 - Exonic hg19 BRCA TCGA-E2-A1LL 3 5'UTR-CDS Inter-chr q24.1 Transcription factor q12 Seq+ 1265 ChimerSeq FusionScan TCGA_RNA-Seq NAP1L4-RPAP1 NAP1L4 chr11 3013483 - RPAP1 chr15 41829399 - Exonic hg19 BRCA TCGA-E2-A1LL 2 5'UTR-5'UTR Inter-chr q15.1 Seq+ 1266 ChimerSeq FusionScan TCGA_RNA-Seq TEAD4-KIAA0528 TEAD4 chr12 3069206 + KIAA0528 chr12 22646271 - Exonic hg19 BRCA TCGA-E2-A1LL 2 5'UTR-CDS Intra-chr p13.33 Transcription factor Seq+ 1267 ChimerSeq FusionScan TCGA_RNA-Seq ADIPOR2-FOXJ2 ADIPOR2 chr12 1863680 + FOXJ2 chr12 8197355 + Exonic hg19 BRCA TCGA-E2-A1LL 2 In-Frame Intra-chr p13.33 p13.31 Transcription factor Seq+ 1268 ChimerSeq FusionScan TCGA_RNA-Seq C6orf62-KIAA0319 C6orf62 chr6 24714545 - KIAA0319 chr6 24601436 - Exonic hg19 BRCA TCGA-E2-A1LL 2 CDS-5'UTR Intra-chr p22.3 p22.3 Seq+ 1269 ChimerSeq FusionScan TCGA_RNA-Seq PHB-LSM1 PHB chr17 47490538 - LSM1 chr8 38029551 - Exonic hg19 BRCA TCGA-A2-A0CU 7 In-Frame Inter-chr q21.33 Tumor suppressor gene p11.23 Seq+ 1270 ChimerSeq FusionScan TCGA_RNA-Seq EXOSC1-CCDC144A EXOSC1 chr10 99205488 - CCDC144A chr17 16675290 + Exonic hg19 BRCA TCGA-A7-A3RF 2 In-Frame Inter-chr q24.1 p11.2 Seq+ 1271 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D23-C3orf26 TBC1D23 chr3 100002655 + C3orf26 chr3 99890682 + Exonic hg19 BRCA TCGA-AO-A129 4 In-Frame Intra-chr q12.1 Seq+ 1272 ChimerSeq FusionScan TCGA_RNA-Seq SENP5-PIGZ SENP5 chr3 196613565 + PIGZ chr3 196678902 - Exonic hg19 BRCA TCGA-AO-A129 3 CDS-5'UTR Intra-chr q29 q29 Seq+ 1273 ChimerSeq FusionScan TCGA_RNA-Seq HSF1-HEATR7A HSF1 chr8 145515556 + HEATR7A chr8 145305114 + Exonic hg19 BRCA TCGA-AO-A129 2 In-Frame Intra-chr q24.3 Transcription factor 1274 ChimerSeq FusionScan TCGA_RNA-Seq MGEA5-ACOT11 MGEA5 chr10 103577580 - ACOT11 chr1 55050327 + Exonic hg19 BRCA TCGA-AO-A129 2 Out-of-Frame Inter-chr q24.32 p32.3 Seq+ 1275 ChimerSeq FusionScan TCGA_RNA-Seq UBXN1-BSCL2 UBXN1 chr11 62444989 - BSCL2 chr11 62460269 - Exonic hg19 BRCA TCGA-AO-A129 2 In-Frame Intra-chr q12.3 q12.3 Seq+ 1276 ChimerSeq FusionScan TCGA_RNA-Seq YARS-S100PBP YARS chr1 33276191 - S100PBP chr1 33295564 + Exonic hg19 BRCA TCGA-AO-A129 2 In-Frame Intra-chr p35.1 p35.1 Seq+ 1277 ChimerSeq FusionScan TCGA_RNA-Seq CLPB-PTPN1 CLPB chr11 72040750 - PTPN1 chr20 49191053 + Exonic hg19 BRCA TCGA-BH-A0HL 5 In-Frame Inter-chr q13.4 q13.13 Tumor suppressor gene Seq+ 1278 ChimerSeq FusionScan TCGA_RNA-Seq ROCK2-PPP2CA ROCK2 chr2 11484121 - PPP2CA chr5 133541822 - Exonic hg19 BRCA TCGA-BH-A0HL 3 In-Frame Inter-chr p25.1 AGC:DMPK q31.1 Tumor suppressor gene Seq+ 1279 ChimerSeq FusionScan TCGA_RNA-Seq NARS2-TOP1 NARS2 chr11 78239887 - TOP1 chr20 39721111 + Exonic hg19 BRCA TCGA-BH-A0HL 2 In-Frame Inter-chr q14.1 q12 Oncogene Seq+ 1280 ChimerSeq FusionScan TCGA_RNA-Seq C11orf30-ACER3 C11orf30 chr11 76183884 + ACER3 chr11 76637600 + Exonic hg19 BRCA TCGA-BH-A0HL 2 In-Frame Intra-chr q13.5 Seq+ 1281 ChimerSeq FusionScan TCGA_RNA-Seq STK10-SNX2 STK10 chr5 171614890 - SNX2 chr5 122161744 + Exonic hg19 BRCA TCGA-BH-A0HL 2 In-Frame Intra-chr q35.1 Tumor suppressor gene q23.2 Seq+ 1282 ChimerSeq FusionScan TCGA_RNA-Seq SULF2-GAB2 SULF2 chr20 46385932 - GAB2 chr11 77991947 - Exonic hg19 BRCA TCGA-BH-A0HL 2 Out-of-Frame Inter-chr q13.12 q14.1 Seq+ 1283 ChimerSeq FusionScan TCGA_RNA-Seq GSPT1-BCAR4 GSPT1 chr16 11971263 - BCAR4 chr16 11914154 - Exonic hg19 BRCA TCGA-E2-A9RU 9 CDS-3'UTR Intra-chr p13.13 p13.13 1284 ChimerSeq FusionScan TCGA_RNA-Seq GALNT2-LACE1 GALNT2 chr1 230203153 + LACE1 chr6 108831414 + Exonic hg19 BRCA TCGA-E2-A9RU 2 In-Frame Inter-chr q42.13 Seq+ 1285 ChimerSeq FusionScan TCGA_RNA-Seq MON2-PIP4K2C MON2 chr12 62943610 + PIP4K2C chr12 57989670 + Exonic hg19 BRCA TCGA-E2-A9RU 2 In-Frame Intra-chr q14.1 q13.3 Seq+ 1286 ChimerSeq FusionScan TCGA_RNA-Seq SREBF1-LRRC48 SREBF1 chr17 17740040 - LRRC48 chr17 17877165 + Exonic hg19 BRCA TCGA-AC-A2QH 3 CDS-5'UTR Intra-chr p11.2 Transcription factor Seq+ 1287 ChimerSeq FusionScan TCGA_RNA-Seq RTN3-CSMD1 RTN3 chr11 63449250 + CSMD1 chr8 3855632 - Exonic hg19 BRCA TCGA-AC-A2QH 3 In-Frame Inter-chr q13.1 p23.2 Tumor suppressor gene Seq+ 1288 ChimerSeq FusionScan TCGA_RNA-Seq CDH2-KIAA1328 CDH2 chr18 25727636 - KIAA1328 chr18 34646852 + Exonic hg19 BRCA TCGA-AC-A2QH 3 Out-of-Frame Intra-chr q12.1 Oncogene q12.2 Seq+ 1289 ChimerSeq FusionScan TCGA_RNA-Seq ELMO2-STAP1 ELMO2 chr20 45008891 - STAP1 chr4 68441102 + Exonic hg19 BRCA TCGA-AR-A1AN 3 In-Frame Inter-chr q13.12 q13.2 Seq+ 1290 ChimerSeq FusionScan TCGA_RNA-Seq PPTC7-ALS2CR12 PPTC7 chr12 111020613 - ALS2CR12 chr2 202173973 - Exonic hg19 BRCA TCGA-A8-A07U 4 Out-of-Frame Inter-chr q24.11 q33.1 Seq+ 1291 ChimerSeq FusionScan TCGA_RNA-Seq C1orf9-DNM3 C1orf9 chr1 172560211 + DNM3 chr1 172348157 + Exonic hg19 BRCA TCGA-A8-A07U 2 In-Frame Intra-chr q24.3 Seq+ 1292 ChimerSeq FusionScan TCGA_RNA-Seq MFSD1-GFM1 MFSD1 chr3 158545126 + GFM1 chr3 158399783 + Exonic hg19 BRCA TCGA-A8-A07U 2 In-Frame Intra-chr q25.32 q25.32 Seq+ 1293 ChimerSeq FusionScan TCGA_RNA-Seq DCUN1D4-SCFD2 DCUN1D4 chr4 52709433 + SCFD2 chr4 54179930 - Exonic hg19 BRCA TCGA-A8-A07U 2 Out-of-Frame Intra-chr q12 q12 1294 ChimerSeq FusionScan TCGA_RNA-Seq CD99L2-CXorf66 CD99L2 chrX 150066994 - CXorf66 chrX 139040376 - Exonic hg19 BRCA TCGA-S3-A6ZF 3 In-Frame Intra-chr q28 q27.1 Seq+ 1295 ChimerSeq FusionScan TCGA_RNA-Seq GLA-HNRNPH2 GLA chrX 100662697 - HNRNPH2 chrX 100666923 + Exonic hg19 BRCA TCGA-S3-A6ZF 3 CDS-5'UTR Intra-chr q22.1 q22.1 Seq+ 1296 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BRCA TCGA-S3-A6ZF 2 Out-of-Frame Intra-chr q22.2 q22.2 1297 ChimerSeq FusionScan TCGA_RNA-Seq TRPC4AP-TOX2 TRPC4AP chr20 33597989 - TOX2 chr20 42695369 + Exonic hg19 BRCA TCGA-S3-A6ZF 2 Out-of-Frame Intra-chr q11.22 q13.12 Seq+ 1298 ChimerSeq FusionScan TCGA_RNA-Seq E2F3-FBXO9 E2F3 chr6 20404063 + FBXO9 chr6 52935854 + Exonic hg19 BRCA TCGA-LL-A740 4 In-Frame Intra-chr p22.3 Tumor suppressor gene Transcription factor p12.1 Seq+ 1299 ChimerSeq FusionScan TCGA_RNA-Seq HIVEP1-DST HIVEP1 chr6 12136125 + DST chr6 56325052 - Exonic hg19 BRCA TCGA-LL-A740 3 Out-of-Frame Intra-chr p24.1 Tumor suppressor gene Transcription factor p12.1 Oncogene Seq+ 1300 ChimerSeq FusionScan TCGA_RNA-Seq PPIG-CRIM1 PPIG chr2 170441000 + CRIM1 chr2 36726361 + Exonic hg19 BRCA TCGA-B6-A0RI 4 5'UTR-CDS Intra-chr q31.1 p22.2 Seq+ 1301 ChimerSeq FusionScan TCGA_RNA-Seq RAB11FIP1-HTRA4 RAB11FIP1 chr8 37727937 - HTRA4 chr8 38839171 + Exonic hg19 BRCA TCGA-BH-A0EI 3 In-Frame Intra-chr p11.23 p11.22 Seq+ 1302 ChimerSeq FusionScan TCGA_RNA-Seq RAB11FIP1-HTRA4 RAB11FIP1 chr8 37727937 - HTRA4 chr8 38836733 + Exonic hg19 BRCA TCGA-BH-A0EI 3 In-Frame Intra-chr p11.23 p11.22 Seq+ 1303 ChimerSeq FusionScan TCGA_RNA-Seq XPO7-NEO1 XPO7 chr8 21777299 + NEO1 chr15 73408880 + Exonic hg19 BRCA TCGA-BH-A0EI 2 Out-of-Frame Inter-chr p21.3 q24.1 1304 ChimerSeq FusionScan TCGA_RNA-Seq SGTA-INSL3 SGTA chr19 2762503 - INSL3 chr19 17927868 - Exonic hg19 BRCA TCGA-AC-A8OP 2 Out-of-Frame Intra-chr p13.3 p13.11 Seq+ 1305 ChimerSeq FusionScan TCGA_RNA-Seq CDH11-PRC1 CDH11 chr16 65005481 - PRC1 chr15 91512853 - Exonic hg19 BRCA TCGA-A2-A4S1 7 Out-of-Frame Inter-chr q21 Oncogene Tumor suppressor gene q26.1 Seq+ 1306 ChimerSeq FusionScan TCGA_RNA-Seq SUPT4H1-SEPT4 SUPT4H1 chr17 56429427 - SEPT4 chr17 56603674 - Exonic hg19 BRCA TCGA-BH-A0DX 3 In-Frame Intra-chr q22 q22 Tumor suppressor gene Seq+ 1307 ChimerSeq FusionScan TCGA_RNA-Seq FAF1-PTRH2 FAF1 chr1 51121113 - PTRH2 chr17 57775339 - Exonic hg19 BRCA TCGA-BH-A0DX 2 CDS-5'UTR Inter-chr p32.3 q23.1 Seq+ 1308 ChimerSeq FusionScan TCGA_RNA-Seq EHBP1-COMMD1 EHBP1 chr2 62998527 + COMMD1 chr2 62362965 + Exonic hg19 BRCA TCGA-AR-A1AO 2 In-Frame Intra-chr p15 p15 Seq+ 1309 ChimerSeq FusionScan TCGA_RNA-Seq NPLOC4-NOTUM NPLOC4 chr17 79603941 - NOTUM chr17 79912179 - Exonic hg19 BRCA TCGA-AR-A1AO 2 Out-of-Frame Intra-chr q25.3 q25.3 Seq+ 1310 ChimerSeq FusionScan TCGA_RNA-Seq DNAAF2-RPS27A DNAAF2 chr14 50100004 - RPS27A chr2 55461966 + Exonic hg19 BRCA TCGA-BH-A0BT 2 In-Frame Inter-chr q21.3 p16.1 1311 ChimerSeq FusionScan TCGA_RNA-Seq CHMP5-VMP1 CHMP5 chr9 33266112 + VMP1 chr17 57886156 + Exonic hg19 BRCA TCGA-E2-A15H 5 In-Frame Inter-chr p13.3 q23.1 Seq+ 1312 ChimerSeq FusionScan TCGA_RNA-Seq FBXO46-KDM4B FBXO46 chr19 46234106 - KDM4B chr19 5047486 + Exonic hg19 BRCA TCGA-E2-A15H 2 5'UTR-CDS Intra-chr q13.32 p13.3 1313 ChimerSeq FusionScan TCGA_RNA-Seq APTX-GNE APTX chr9 33001564 - GNE chr9 36220017 - Exonic hg19 BRCA TCGA-E2-A15H 2 Out-of-Frame Intra-chr p21.1 p13.3 Seq+ 1314 ChimerSeq FusionScan TCGA_RNA-Seq COIL-CDR2L COIL chr17 55038135 - CDR2L chr17 72995598 + Exonic hg19 BRCA TCGA-E2-A15H 2 Out-of-Frame Intra-chr q22 q25.1 Seq+ 1315 ChimerSeq FusionScan TCGA_RNA-Seq AKAP1-GGA3 AKAP1 chr17 55162759 + GGA3 chr17 73242877 - Exonic hg19 BRCA TCGA-E2-A15H 2 5'UTR-5'UTR Intra-chr q22 q25.1 Seq+ 1316 ChimerSeq FusionScan TCGA_RNA-Seq RPTOR-NFX1 RPTOR chr17 78704506 + NFX1 chr9 33354083 + Exonic hg19 BRCA TCGA-E2-A15H 2 Out-of-Frame Inter-chr q25.3 p13.3 Transcription factor 1317 ChimerSeq FusionScan TCGA_RNA-Seq TPD52-STAU2 TPD52 chr8 81083659 - STAU2 chr8 74601048 - Exonic hg19 BRCA TCGA-E2-A2P5 2 Out-of-Frame Intra-chr q21.13 q21.11 Seq+ 1318 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-A2-A0D3 3 5'UTR-5'UTR Inter-chr p13.2 p22 1319 ChimerSeq FusionScan TCGA_RNA-Seq SPOP-RHOA SPOP chr17 47755294 - RHOA chr3 49413024 - Exonic hg19 BRCA TCGA-A2-A0D3 2 5'UTR-5'UTR Inter-chr q21.33 Oncogene Tumor suppressor gene p21.31 Oncogene Tumor suppressor gene 1320 ChimerSeq FusionScan TCGA_RNA-Seq LRRC59-NUP107 LRRC59 chr17 48469758 - NUP107 chr12 69135592 + Exonic hg19 BRCA TCGA-A8-A0A7 13 In-Frame Inter-chr q21.33 q15 Seq+ 1321 ChimerSeq FusionScan TCGA_RNA-Seq RARA-CA10 RARA chr17 38474700 + CA10 chr17 50149753 - Exonic hg19 BRCA TCGA-A8-A0A7 6 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 1322 ChimerSeq FusionScan TCGA_RNA-Seq NPTN-CLUAP1 NPTN chr15 73879864 - CLUAP1 chr16 3580567 + Exonic hg19 BRCA TCGA-BH-A0AV 7 In-Frame Inter-chr q24.1 p13.3 Seq+ 1323 ChimerSeq FusionScan TCGA_RNA-Seq NSA2-HEXB NSA2 chr5 74066635 + HEXB chr5 74009330 + Exonic hg19 BRCA TCGA-BH-A0AV 3 In-Frame Intra-chr q13.3 q13.3 Seq+ 1324 ChimerSeq FusionScan TCGA_RNA-Seq BAI2-SPOCD1 BAI2 chr1 32221599 - SPOCD1 chr1 32259836 - Exonic hg19 BRCA TCGA-BH-A0AV 2 Out-of-Frame Intra-chr p35.2 Seq+ 1325 ChimerSeq FusionScan TCGA_RNA-Seq TAOK1-ACER3 TAOK1 chr17 27825539 + ACER3 chr11 76687332 + Exonic hg19 BRCA TCGA-A1-A0SM 4 In-Frame Inter-chr q11.2 q13.5 Seq+ 1326 ChimerSeq FusionScan TCGA_RNA-Seq FBXL20-GDPD5 FBXL20 chr17 37457253 - GDPD5 chr11 75167861 - Exonic hg19 BRCA TCGA-A1-A0SM 2 In-Frame Inter-chr q12 q13.5 Seq+ 1327 ChimerSeq FusionScan TCGA_RNA-Seq RPN1-CHCHD3 RPN1 chr3 128363761 - CHCHD3 chr7 132709387 - Exonic hg19 BRCA TCGA-A1-A0SM 2 Out-of-Frame Inter-chr q21.3 q33 Transcription factor 1328 ChimerSeq FusionScan TCGA_RNA-Seq DDX52-PSMD3 DDX52 chr17 35980917 - PSMD3 chr17 38145991 + Exonic hg19 BRCA TCGA-A1-A0SM 2 In-Frame Intra-chr q12 q21.1 Seq+ 1329 ChimerSeq FusionScan TCGA_RNA-Seq PXDN-ALMS1 PXDN chr2 1748027 - ALMS1 chr2 73746901 + Exonic hg19 BRCA TCGA-A1-A0SM 2 In-Frame Intra-chr p25.3 p13.1 1330 ChimerSeq FusionScan TCGA_RNA-Seq RARA-NARS2 RARA chr17 38487648 + NARS2 chr11 78282489 - Exonic hg19 BRCA TCGA-A1-A0SM 2 Out-of-Frame Inter-chr q21.2 Oncogene Transcription factor q14.1 Seq+ 1331 ChimerSeq FusionScan TCGA_RNA-Seq NPEPPS-RSF1 NPEPPS chr17 45623359 + RSF1 chr11 77378536 - Exonic hg19 BRCA TCGA-A1-A0SM 2 In-Frame Inter-chr q21.32 q14.1 1332 ChimerSeq FusionScan TCGA_RNA-Seq CRHR1-ACTR3 CRHR1 chr17 43707524 + ACTR3 chr2 114697535 + Exonic hg19 BRCA TCGA-D8-A1JB 2 5'UTR-CDS Inter-chr q21.31 q14.1 1333 ChimerSeq FusionScan TCGA_RNA-Seq PIP5K1A-MLLT11 PIP5K1A chr1 151171557 + MLLT11 chr1 151039694 + Exonic hg19 BRCA TCGA-BH-A0B9 5 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 1334 ChimerSeq FusionScan TCGA_RNA-Seq ACTN4-CAPZB ACTN4 chr19 39207956 + CAPZB chr1 19712120 - Exonic hg19 BRCA TCGA-BH-A0B9 5 In-Frame Inter-chr p36.13 Seq+ 1335 ChimerSeq FusionScan TCGA_RNA-Seq TFDP1-TMCO3 TFDP1 chr13 114277601 + TMCO3 chr13 114164552 + Exonic hg19 BRCA TCGA-BH-A0B9 4 In-Frame Intra-chr q34 Transcription factor q34 Seq+ 1336 ChimerSeq FusionScan TCGA_RNA-Seq CDV3-TMEM108 CDV3 chr3 133293959 + TMEM108 chr3 133098595 + Exonic hg19 BRCA TCGA-BH-A0B9 4 Out-of-Frame Intra-chr q22.1 q22.1 Seq+ 1337 ChimerSeq FusionScan TCGA_RNA-Seq AARS-COG4 AARS chr16 70316522 - COG4 chr16 70553634 - Exonic hg19 BRCA TCGA-BH-A0B9 3 In-Frame Intra-chr q22.1 q22.1 Seq+ 1338 ChimerSeq FusionScan TCGA_RNA-Seq ZNF607-CAPN12 ZNF607 chr19 38198814 - CAPN12 chr19 39233168 - Exonic hg19 BRCA TCGA-BH-A0B9 2 In-Frame Intra-chr q13.12 Transcription factor q13.2 Seq+ 1339 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-ATP5C1 RCC1 chr1 28834672 + ATP5C1 chr10 7838083 + Exonic hg19 BRCA TCGA-BH-A0B9 2 5'UTR-CDS Inter-chr p35.3 p14 1340 ChimerSeq FusionScan TCGA_RNA-Seq FAM176C-MRAP FAM176C chr21 33867480 + MRAP chr21 33683994 + Exonic hg19 BRCA TCGA-BH-A0B9 2 Out-of-Frame Intra-chr q22.11 1341 ChimerSeq FusionScan TCGA_RNA-Seq BACE2-FAM3B BACE2 chr21 42629253 + FAM3B chr21 42710304 + Exonic hg19 BRCA TCGA-BH-A0B9 2 In-Frame Intra-chr q22.2 q22.3 Seq+ 1342 ChimerSeq FusionScan TCGA_RNA-Seq EPB41L4B-PTPN3 EPB41L4B chr9 112030670 - PTPN3 chr9 112172695 - Exonic hg19 BRCA TCGA-BH-A0B9 2 Out-of-Frame Intra-chr q31.3 q31.3 Seq+ 1343 ChimerSeq FusionScan TCGA_RNA-Seq RANBP17-KCNIP1 RANBP17 chr5 170351554 + KCNIP1 chr5 170145761 + Exonic hg19 BRCA TCGA-BH-A0B9 2 In-Frame Intra-chr q35.1 q35.1 Seq+ 1344 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992064 + VMP1 chr17 57915655 + Exonic hg19 BRCA TCGA-BH-A0B9 2 Out-of-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 1345 ChimerSeq FusionScan TCGA_RNA-Seq MKL2-BCAR4 MKL2 chr16 14173211 + BCAR4 chr16 11914154 - Exonic hg19 BRCA TCGA-AO-A0JL 10 5'UTR-3'UTR Intra-chr p13.12 p13.13 Seq+ 1346 ChimerSeq FusionScan TCGA_RNA-Seq AKAP8-VMP1 AKAP8 chr19 15469777 - VMP1 chr17 57842331 + Exonic hg19 BRCA TCGA-A8-A07L 2 In-Frame Inter-chr p13.12 Transcription factor q23.1 Seq+ 1347 ChimerSeq FusionScan TCGA_RNA-Seq AP2A2-TMEM80 AP2A2 chr11 959505 + TMEM80 chr11 700614 + Exonic hg19 BRCA TCGA-A8-A07L 2 In-Frame Intra-chr p15.5 p15.5 Seq+ 1348 ChimerSeq FusionScan TCGA_RNA-Seq PPP6R2-SEPT9 PPP6R2 chr22 50810579 + SEPT9 chr17 75483505 + Exonic hg19 BRCA TCGA-A8-A07L 2 5'UTR-CDS Inter-chr q13.33 1349 ChimerSeq FusionScan TCGA_RNA-Seq SLC25A17-ST13 SLC25A17 chr22 41215198 - ST13 chr22 41244373 - Exonic hg19 BRCA TCGA-A8-A07L 2 In-Frame Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 1350 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1L1-ADAM32 WHSC1L1 chr8 38138984 - ADAM32 chr8 39131830 + Exonic hg19 BRCA TCGA-EW-A1PH 5 Out-of-Frame Intra-chr p11.23 Tumor suppressor gene Seq+ 1351 ChimerSeq FusionScan TCGA_RNA-Seq PLD3-ACTN4 PLD3 chr19 40854675 + ACTN4 chr19 39198756 + Exonic hg19 BRCA TCGA-EW-A1PH 3 5'UTR-CDS Intra-chr q13.2 Seq+ 1352 ChimerSeq FusionScan TCGA_RNA-Seq RABGAP1L-CACYBP RABGAP1L chr1 174846743 + CACYBP chr1 174973749 + Exonic hg19 BRCA TCGA-EW-A1PH 3 In-Frame Intra-chr q25.1 q25.1 Seq+ 1353 ChimerSeq FusionScan TCGA_RNA-Seq ATF6-SH2D1B ATF6 chr1 161772062 + SH2D1B chr1 162367105 - Exonic hg19 BRCA TCGA-EW-A1PH 2 In-Frame Intra-chr q23.3 Transcription factor q23.3 Seq+ 1354 ChimerSeq FusionScan TCGA_RNA-Seq TSTD1-LSM14A TSTD1 chr1 161008669 - LSM14A chr19 34685382 + Exonic hg19 BRCA TCGA-EW-A1PH 2 In-Frame Inter-chr q23.3 Seq+ 1355 ChimerSeq FusionScan TCGA_RNA-Seq UBL3-ZNF211 UBL3 chr13 30423648 - ZNF211 chr19 58152071 + Exonic hg19 BRCA TCGA-BH-A1EY 3 Out-of-Frame Inter-chr q12.3 q13.43 Transcription factor Seq+ 1356 ChimerSeq FusionScan TCGA_RNA-Seq PTTG1IP-SIM2 PTTG1IP chr21 46293416 - SIM2 chr21 38081467 + Exonic hg19 BRCA TCGA-BH-A1EY 3 In-Frame Intra-chr q22.3 q22.13 Transcription factor Seq+ 1357 ChimerSeq FusionScan TCGA_RNA-Seq ADD3-XPNPEP1 ADD3 chr10 111768057 + XPNPEP1 chr10 111652833 - Exonic hg19 BRCA TCGA-BH-A1EY 3 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 1358 ChimerSeq FusionScan TCGA_RNA-Seq PRKDC-DOCK4 PRKDC chr8 48866366 - DOCK4 chr7 111585853 - Exonic hg19 BRCA TCGA-AC-A2QH 2 Out-of-Frame Inter-chr q11.21 Oncogene q31.1 1359 ChimerSeq FusionScan TCGA_RNA-Seq USP22-MYH10 USP22 chr17 20919064 - MYH10 chr17 8508300 - Exonic hg19 BRCA TCGA-A8-A093 7 Out-of-Frame Intra-chr p11.2 p13.1 Seq+ 1360 ChimerSeq FusionScan TCGA_RNA-Seq MRPL48-DTX4 MRPL48 chr11 73536841 + DTX4 chr11 58972148 + Exonic hg19 BRCA TCGA-A8-A093 5 In-Frame Intra-chr q13.4 q12.1 Seq+ 1361 ChimerSeq FusionScan TCGA_RNA-Seq ZFP91-RAB6A ZFP91 chr11 58352357 + RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-A8-A093 4 Out-of-Frame Intra-chr q12.1 Transcription factor q13.4 Seq+ 1362 ChimerSeq FusionScan TCGA_RNA-Seq PAK4-SPINT2 PAK4 chr19 39616559 + SPINT2 chr19 38774266 + Exonic hg19 BRCA TCGA-EW-A2FV 5 5'UTR-CDS Intra-chr q13.2 STE:STE20 q13.2 Tumor suppressor gene Seq+ 1363 ChimerSeq FusionScan TCGA_RNA-Seq USP6-STXBP4 USP6 chr17 5052062 + STXBP4 chr17 53218670 + Exonic hg19 BRCA TCGA-EW-A2FV 3 Out-of-Frame Intra-chr p13.2 q22 1364 ChimerSeq FusionScan TCGA_RNA-Seq ZNF417-ZSCAN4 ZNF417 chr19 58427746 - ZSCAN4 chr19 58187408 + Exonic hg19 BRCA TCGA-EW-A2FV 2 CDS-5'UTR Intra-chr q13.43 Transcription factor q13.43 Transcription factor 1365 ChimerSeq FusionScan TCGA_RNA-Seq ZNF587B-ZSCAN4 ZNF587B chr19 58350517 + ZSCAN4 chr19 58187408 + Exonic hg19 BRCA TCGA-EW-A2FV 2 CDS-5'UTR Intra-chr q13.43 Transcription factor q13.43 Transcription factor Seq+ 1366 ChimerSeq FusionScan TCGA_RNA-Seq PROSC-WHSC1L1 PROSC chr8 37623873 + WHSC1L1 chr8 38173560 - Exonic hg19 BRCA TCGA-BH-A0DI 2 In-Frame Intra-chr p11.23 Tumor suppressor gene 1367 ChimerSeq FusionScan TCGA_RNA-Seq ACTN2-CHRM3 ACTN2 chr1 236850099 + CHRM3 chr1 239841485 + Exonic hg19 BRCA TCGA-AN-A0G0 4 5'UTR-5'UTR Intra-chr q43 q43 Seq+ 1368 ChimerSeq FusionScan TCGA_RNA-Seq ACER3-NARS2 ACER3 chr11 76572123 + NARS2 chr11 78180359 - Exonic hg19 BRCA TCGA-AN-A0G0 4 Out-of-Frame Intra-chr q13.5 q14.1 Seq+ 1369 ChimerSeq FusionScan TCGA_RNA-Seq ACER3-NARS2 ACER3 chr11 76572123 + NARS2 chr11 78177059 - Exonic hg19 BRCA TCGA-AN-A0G0 2 Out-of-Frame Intra-chr q13.5 q14.1 Seq+ 1370 ChimerSeq FusionScan TCGA_RNA-Seq HCFC1-MECP2 HCFC1 chrX 153216800 - MECP2 chrX 153357765 - Exonic hg19 BRCA TCGA-D8-A1X9 2 CDS-5'UTR Intra-chr q28 q28 Transcription factor Seq+ 1371 ChimerSeq FusionScan TCGA_RNA-Seq ITM2B-RB1 ITM2B chr13 48833083 + RB1 chr13 49037866 + Exonic hg19 BRCA TCGA-AN-A0FX 3 Out-of-Frame Intra-chr q14.2 q14.2 Oncogene Tumor suppressor gene Seq+ 1372 ChimerSeq FusionScan TCGA_RNA-Seq ADAM32-ZNF251 ADAM32 chr8 39009067 + ZNF251 chr8 145948767 - Exonic hg19 BRCA TCGA-AN-A0FX 2 Out-of-Frame Intra-chr Transcription factor Seq+ 1373 ChimerSeq FusionScan TCGA_RNA-Seq GGT6-PELP1 GGT6 chr17 4463676 - PELP1 chr17 4580107 - Exonic hg19 BRCA TCGA-AN-A0FX 2 Out-of-Frame Intra-chr p13.2 p13.2 Seq+ 1374 ChimerSeq FusionScan TCGA_RNA-Seq RARA-ZNF595 RARA chr17 38487648 + ZNF595 chr4 59322 + Exonic hg19 BRCA TCGA-AR-A0TX 5 In-Frame Inter-chr q21.2 Oncogene Transcription factor p16.3 Transcription factor Seq+ 1375 ChimerSeq FusionScan TCGA_RNA-Seq PMEPA1-PTGIS PMEPA1 chr20 56284529 - PTGIS chr20 48130932 - Exonic hg19 BRCA TCGA-AR-A0TX 5 Out-of-Frame Intra-chr q13.31 q13.13 Seq+ 1376 ChimerSeq FusionScan TCGA_RNA-Seq ABAT-C16orf62 ABAT chr16 8768568 + C16orf62 chr16 19663297 + Exonic hg19 BRCA TCGA-AR-A0TX 3 5'UTR-CDS Intra-chr p13.2 p12.3 Seq+ 1377 ChimerSeq FusionScan TCGA_RNA-Seq PPM1H-SRGAP1 PPM1H chr12 63225893 - SRGAP1 chr12 64536074 + Exonic hg19 BRCA TCGA-AR-A0TX 3 In-Frame Intra-chr q14.2 q14.2 Seq+ 1378 ChimerSeq FusionScan TCGA_RNA-Seq CACNB1-MLLT6 CACNB1 chr17 37339965 - MLLT6 chr17 36878930 + Exonic hg19 BRCA TCGA-AR-A0TX 2 Out-of-Frame Intra-chr q12 q12 Seq+ 1379 ChimerSeq FusionScan TCGA_RNA-Seq RARA-ZNF595 RARA chr17 38474700 + ZNF595 chr4 59322 + Exonic hg19 BRCA TCGA-AR-A0TX 2 5'UTR-CDS Inter-chr q21.2 Oncogene Transcription factor p16.3 Transcription factor Seq+ 1380 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP23-ASIC2 ARHGAP23 chr17 36636124 + ASIC2 chr17 31351032 - Exonic hg19 BRCA TCGA-AR-A0TX 2 In-Frame Intra-chr q12 q12 Seq+ 1381 ChimerSeq FusionScan TCGA_RNA-Seq TNRC18-ZC3HAV1 TNRC18 chr7 5463071 - ZC3HAV1 chr7 138768778 - Exonic hg19 BRCA TCGA-BH-A0B2 3 5'UTR-CDS Intra-chr p22.1 q34 Seq+ 1382 ChimerSeq FusionScan TCGA_RNA-Seq DPM1-EZR DPM1 chr20 49574899 - EZR chr6 159197536 - Exonic hg19 BRCA TCGA-BH-A0B2 2 In-Frame Inter-chr q13.13 q25.3 Seq+ 1383 ChimerSeq FusionScan TCGA_RNA-Seq MSMO1-DDX60 MSMO1 chr4 166248916 + DDX60 chr4 169143032 - Exonic hg19 BRCA TCGA-BH-A0B2 2 5'UTR-CDS Intra-chr q32.3 q32.3 Seq+ 1384 ChimerSeq FusionScan TCGA_RNA-Seq NCOR1-DPM1 NCOR1 chr17 16055259 - DPM1 chr20 49571822 - Exonic hg19 BRCA TCGA-BH-A0B2 2 In-Frame Inter-chr p11.2 Oncogene q13.13 Seq+ 1385 ChimerSeq FusionScan TCGA_RNA-Seq CRHR1-KANSL1 CRHR1 chr17 43699407 + KANSL1 chr17 44172067 - Exonic hg19 BRCA TCGA-A8-A09W 2 5'UTR-CDS Intra-chr q21.31 Pub 1386 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-BH-A0B5 3 5'UTR-5'UTR Inter-chr p13.2 p22 1387 ChimerSeq FusionScan TCGA_RNA-Seq LTV1-ATG5 LTV1 chr6 144167361 + ATG5 chr6 106649964 - Exonic hg19 BRCA TCGA-E9-A248 7 In-Frame Intra-chr q24.2 q21 Seq+ 1388 ChimerSeq FusionScan TCGA_RNA-Seq ARID1B-PLEKHG1 ARID1B chr6 157256710 + PLEKHG1 chr6 151089773 + Exonic hg19 BRCA TCGA-E9-A248 4 In-Frame Intra-chr q25.3 Oncogene q25.1 Seq+ 1389 ChimerSeq FusionScan TCGA_RNA-Seq TBCD-FOXK2 TBCD chr17 80828256 + FOXK2 chr17 80521229 + Exonic hg19 BRCA TCGA-E9-A248 3 In-Frame Intra-chr q25.3 Transcription factor Seq+ 1390 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHG1-DSE PLEKHG1 chr6 150921153 + DSE chr6 116747736 + Exonic hg19 BRCA TCGA-E9-A248 2 5'UTR-CDS Intra-chr q25.1 q22.1 1391 ChimerSeq FusionScan TCGA_RNA-Seq SYNJ2-ZDHHC14 SYNJ2 chr6 158403120 + ZDHHC14 chr6 157963616 + Exonic hg19 BRCA TCGA-E9-A248 2 Out-of-Frame Intra-chr q25.3 q25.3 Seq+ 1392 ChimerSeq FusionScan TCGA_RNA-Seq TYW1-POM121 TYW1 chr7 66563705 + POM121 chr7 72398922 + Exonic hg19 BRCA TCGA-E9-A248 2 In-Frame Intra-chr q11.21 q11.23 1393 ChimerSeq FusionScan TCGA_RNA-Seq PAPD5-SHANK2 PAPD5 chr16 50250106 + SHANK2 chr11 70858384 - Exonic hg19 BRCA TCGA-EW-A1J5 9 CDS-5'UTR Inter-chr q12.1 q13.4 Seq+ 1394 ChimerSeq FusionScan TCGA_RNA-Seq HOOK1-RAB6A HOOK1 chr1 60280852 + RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-AR-A24Z 6 In-Frame Inter-chr p32.1 q13.4 Seq+ 1395 ChimerSeq FusionScan TCGA_RNA-Seq SORBS2-AIF1 SORBS2 chr4 186605907 - AIF1 chr6 31584120 + Exonic hg19 BRCA TCGA-AR-A24Z 3 In-Frame Inter-chr q35.1 Tumor suppressor gene Seq+ 1396 ChimerSeq FusionScan TCGA_RNA-Seq FOXJ3-ZFYVE9 FOXJ3 chr1 42730785 - ZFYVE9 chr1 52682040 + Exonic hg19 BRCA TCGA-AR-A24Z 2 CDS-5'UTR Intra-chr p34.2 Transcription factor p32.3 Seq+ 1397 ChimerSeq FusionScan TCGA_RNA-Seq DOCK7-INADL DOCK7 chr1 62958374 - INADL chr1 62626579 + Exonic hg19 BRCA TCGA-AR-A24Z 2 Out-of-Frame Intra-chr p31.3 Seq+ 1398 ChimerSeq FusionScan TCGA_RNA-Seq DSTYK-NAV1 DSTYK chr1 205180398 - NAV1 chr1 201749548 + Exonic hg19 BRCA TCGA-AR-A24Z 2 Out-of-Frame Intra-chr q32.1 q32.1 Seq+ 1399 ChimerSeq FusionScan TCGA_RNA-Seq PACSIN2-ZNF823 PACSIN2 chr22 43308026 - ZNF823 chr19 11836142 - Exonic hg19 BRCA TCGA-AR-A24Z 2 In-Frame Inter-chr q13.2 p13.2 Transcription factor Seq+ 1400 ChimerSeq FusionScan TCGA_RNA-Seq DIAPH3-TDRD3 DIAPH3 chr13 60667761 - TDRD3 chr13 61141658 + Exonic hg19 BRCA TCGA-AN-A0FY 5 In-Frame Intra-chr q21.2 q21.2 Seq+ 1401 ChimerSeq FusionScan TCGA_RNA-Seq VIPR2-SCTR VIPR2 chr7 158826903 - SCTR chr2 120199175 - Exonic hg19 BRCA TCGA-E9-A227 2 Out-of-Frame Inter-chr q36.3 q14.2 1402 ChimerSeq FusionScan TCGA_RNA-Seq NPEPPS-TBC1D3F NPEPPS chr17 45608921 + TBC1D3F chr17 36291419 + Exonic hg19 BRCA TCGA-AN-A0FD 4 Out-of-Frame Intra-chr q21.32 q12 1403 ChimerSeq FusionScan TCGA_RNA-Seq TPM4-INTS2 TPM4 chr19 16187507 + INTS2 chr17 59952399 - Exonic hg19 BRCA TCGA-AN-A0FD 3 Out-of-Frame Inter-chr p13.12 q23.2 Seq+ 1404 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF3-ACP6 ARHGEF3 chr3 56916319 - ACP6 chr1 147131890 - Exonic hg19 BRCA TCGA-AO-A0J6 2 In-Frame Inter-chr p14.3 q21.2 Seq+ 1405 ChimerSeq FusionScan TCGA_RNA-Seq GULP1-NUP35 GULP1 chr2 189248616 + NUP35 chr2 183993014 + Exonic hg19 BRCA TCGA-A1-A0SP 2 5'UTR-CDS Intra-chr q32.1 q32.1 Seq+ 1406 ChimerSeq FusionScan TCGA_RNA-Seq FBXW7-MGST2 FBXW7 chr4 153268081 - MGST2 chr4 140661365 + Exonic hg19 BRCA TCGA-A1-A0SP 2 CDS-3'UTR Intra-chr q31.3 Oncogene Tumor suppressor gene q31.1 Seq+ 1407 ChimerSeq FusionScan TCGA_RNA-Seq NUBP1-UMODL1 NUBP1 chr16 10851884 + UMODL1 chr21 43508403 + Exonic hg19 BRCA TCGA-A1-A0SP 2 In-Frame Inter-chr p13.13 q22.3 Seq+ 1408 ChimerSeq FusionScan TCGA_RNA-Seq KHDRBS3-ADI1 KHDRBS3 chr8 136594316 + ADI1 chr2 3504764 - Exonic hg19 BRCA TCGA-GI-A2C9 7 In-Frame Inter-chr q24.23 Seq+ 1409 ChimerSeq FusionScan TCGA_RNA-Seq ZMIZ1-NSMCE4A ZMIZ1 chr10 80976031 + NSMCE4A chr10 123733596 - Exonic hg19 BRCA TCGA-GI-A2C9 4 In-Frame Intra-chr q22.3 q26.13 Seq+ 1410 ChimerSeq FusionScan TCGA_RNA-Seq EIF4G3-DDOST EIF4G3 chr1 21267983 - DDOST chr1 20982680 - Exonic hg19 BRCA TCGA-GI-A2C9 2 In-Frame Intra-chr p36.12 p36.12 Seq+ 1411 ChimerSeq FusionScan TCGA_RNA-Seq DTX2-ZP3 DTX2 chr7 76093026 + ZP3 chr7 76054368 + Exonic hg19 BRCA TCGA-GI-A2C9 2 5'UTR-5'UTR Intra-chr q11.23 Seq+ 1412 ChimerSeq FusionScan TCGA_RNA-Seq NCOA3-ACTR5 NCOA3 chr20 46256767 + ACTR5 chr20 37383599 + Exonic hg19 BRCA TCGA-GI-A2C9 2 In-Frame Intra-chr q13.12 Transcription factor q11.23 1413 ChimerSeq FusionScan TCGA_RNA-Seq SH3GL1-ANKRD24 SH3GL1 chr19 4400320 - ANKRD24 chr19 4219587 + Exonic hg19 BRCA TCGA-GM-A2DC 2 In-Frame Intra-chr p13.3 p13.3 Seq+ 1414 ChimerSeq FusionScan TCGA_RNA-Seq CREBBP-UBE2V2 CREBBP chr16 3786036 - UBE2V2 chr8 48955592 + Exonic hg19 BRCA TCGA-A2-A0CK 2 Out-of-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene q11.21 1415 ChimerSeq FusionScan TCGA_RNA-Seq BAG4-ZMAT4 BAG4 chr8 38034657 + ZMAT4 chr8 40683199 - Exonic hg19 BRCA TCGA-AC-A2BM 4 CDS-5'UTR Intra-chr p11.23 p11.21 Transcription factor Seq+ 1416 ChimerSeq FusionScan TCGA_RNA-Seq HUNK-MRAP HUNK chr21 33297072 + MRAP chr21 33678950 + Exonic hg19 BRCA TCGA-EW-A1J2 2 Out-of-Frame Intra-chr q22.11 CAMK:CAMKL q22.11 Seq+ 1417 ChimerSeq FusionScan TCGA_RNA-Seq ARNT2-PDLIM5 ARNT2 chr15 80696888 + PDLIM5 chr4 95539154 + Exonic hg19 BRCA TCGA-EW-A1J2 2 Out-of-Frame Inter-chr q25.1 Transcription factor q22.3 Seq+ 1418 ChimerSeq FusionScan TCGA_RNA-Seq EPS15L1-CLNS1A EPS15L1 chr19 16552702 - CLNS1A chr11 77330740 - Exonic hg19 BRCA TCGA-C8-A12Q 4 Out-of-Frame Inter-chr p13.11 q14.1 Seq+ 1419 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHF2-C8orf38 PLEKHF2 chr8 96146258 + C8orf38 chr8 96044222 + Exonic hg19 BRCA TCGA-C8-A12Q 4 5'UTR-CDS Intra-chr q22.1 Seq+ 1420 ChimerSeq FusionScan TCGA_RNA-Seq RAB38-CA10 RAB38 chr11 87908350 - CA10 chr17 50149753 - Exonic hg19 BRCA TCGA-C8-A12Q 4 In-Frame Inter-chr q14.2 q22 Seq+ 1421 ChimerSeq FusionScan TCGA_RNA-Seq RPRD2-SHC1 RPRD2 chr1 150337395 + SHC1 chr1 154938993 - Exonic hg19 BRCA TCGA-C8-A12Q 3 Out-of-Frame Intra-chr q21.2 q21.3 Seq+ 1422 ChimerSeq FusionScan TCGA_RNA-Seq KAT6B-ADK KAT6B chr10 76603236 + ADK chr10 76429940 + Exonic hg19 BRCA TCGA-C8-A12Q 2 Out-of-Frame Intra-chr Oncogene q22.2 Seq+ 1423 ChimerSeq FusionScan TCGA_RNA-Seq RNF169-CBX1 RNF169 chr11 74528759 + CBX1 chr17 46154403 - Exonic hg19 BRCA TCGA-C8-A12Q 2 CDS-5'UTR Inter-chr q13.4 q21.32 Seq+ 1424 ChimerSeq FusionScan TCGA_RNA-Seq APLP2-KCNJ5 APLP2 chr11 129939977 + KCNJ5 chr11 128781158 + Exonic hg19 BRCA TCGA-AN-A0FS 2 5'UTR-5'UTR Intra-chr q24.3 q24.3 Seq+ 1425 ChimerSeq FusionScan TCGA_RNA-Seq NFIB-HEATR5B NFIB chr9 14313480 - HEATR5B chr2 37208937 - Exonic hg19 BRCA TCGA-A1-A0SB 8 Out-of-Frame Inter-chr p22.3 Transcription factor p22.2 Seq+ 1426 ChimerSeq FusionScan TCGA_RNA-Seq MYB-NFIB MYB chr6 135521553 + NFIB chr9 14307519 - Exonic hg19 BRCA TCGA-A1-A0SB 3 In-Frame Inter-chr q23.3 Oncogene Transcription factor p22.3 Transcription factor KB Pub Seq+ 1427 ChimerSeq FusionScan TCGA_RNA-Seq NFIB-STRN NFIB chr9 14313480 - STRN chr2 37152351 - Exonic hg19 BRCA TCGA-A1-A0SB 3 In-Frame Inter-chr p22.3 Transcription factor p22.2 Seq+ 1428 ChimerSeq FusionScan TCGA_RNA-Seq SHFM1-ADCY2 SHFM1 chr7 96338999 - ADCY2 chr5 7773044 + Exonic hg19 BRCA TCGA-BH-A18V 3 Out-of-Frame Inter-chr p15.31 Seq+ 1429 ChimerSeq FusionScan TCGA_RNA-Seq MVP-KIF22 MVP chr16 29851780 + KIF22 chr16 29814769 + Exonic hg19 BRCA TCGA-BH-A18V 2 In-Frame Intra-chr p11.2 p11.2 Seq+ 1430 ChimerSeq FusionScan TCGA_RNA-Seq EYA3-KIAA0247 EYA3 chr1 28362054 - KIAA0247 chr14 70125229 + Exonic hg19 BRCA TCGA-BH-A18V 2 CDS-5'UTR Inter-chr p35.3 Seq+ 1431 ChimerSeq FusionScan TCGA_RNA-Seq PLEC-EHMT1 PLEC chr8 145049344 - EHMT1 chr9 140611077 + Exonic hg19 BRCA TCGA-S3-AA17 2 In-Frame Inter-chr q24.3 q34.3 1432 ChimerSeq FusionScan TCGA_RNA-Seq CALM2-HNRNPC CALM2 chr2 47403579 - HNRNPC chr14 21702388 - Exonic hg19 BRCA TCGA-E2-A1IK 2 CDS-5'UTR Inter-chr p21 q11.2 1433 ChimerSeq FusionScan TCGA_RNA-Seq RBM5-SRSF4 RBM5 chr3 50140599 + SRSF4 chr1 29481422 - Exonic hg19 BRCA TCGA-E2-A1IK 2 In-Frame Inter-chr p21.31 Tumor suppressor gene p35.3 1434 ChimerSeq FusionScan TCGA_RNA-Seq CRHR1-DYNLL2 CRHR1 chr17 43699407 + DYNLL2 chr17 56164442 + Exonic hg19 BRCA TCGA-BH-A1FM 4 5'UTR-5'UTR Intra-chr q21.31 q22 Seq+ 1435 ChimerSeq FusionScan TCGA_RNA-Seq KANSL1-DYNLL2 KANSL1 chr17 44301036 - DYNLL2 chr17 56164442 + Exonic hg19 BRCA TCGA-BH-A1FM 4 5'UTR-5'UTR Intra-chr q22 Seq+ 1436 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB43-PITPNC1 ZBTB43 chr9 129571194 + PITPNC1 chr17 65528917 + Exonic hg19 BRCA TCGA-BH-A1FM 3 5'UTR-CDS Inter-chr q33.3 Transcription factor q24.2 Seq+ 1437 ChimerSeq FusionScan TCGA_RNA-Seq ELAC2-RYR3 ELAC2 chr17 12899019 - RYR3 chr15 34034566 + Exonic hg19 BRCA TCGA-BH-A1FM 2 In-Frame Inter-chr p12 q13.3 1438 ChimerSeq FusionScan TCGA_RNA-Seq ASXL1-PDRG1 ASXL1 chr20 30956926 + PDRG1 chr20 30536685 - Exonic hg19 BRCA TCGA-BH-A1FM 2 Out-of-Frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 1439 ChimerSeq FusionScan TCGA_RNA-Seq ABCC4-SCEL ABCC4 chr13 95953494 - SCEL chr13 78202081 + Exonic hg19 BRCA TCGA-BH-A1FM 2 In-Frame Intra-chr q32.1 q22.3 1440 ChimerSeq FusionScan TCGA_RNA-Seq CCNK-CCDC171 CCNK chr14 99969981 + CCDC171 chr9 15920267 + Exonic hg19 BRCA TCGA-BH-A1FM 2 Out-of-Frame Inter-chr q32.2 p22.3 Seq+ 1441 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB43-PITPNC1 ZBTB43 chr9 129567411 + PITPNC1 chr17 65528917 + Exonic hg19 BRCA TCGA-BH-A1FM 2 5'UTR-CDS Inter-chr q33.3 Transcription factor q24.2 Seq+ 1442 ChimerSeq FusionScan TCGA_RNA-Seq KCNJ3-GALNT13 KCNJ3 chr2 155566331 + GALNT13 chr2 155252502 + Exonic hg19 BRCA TCGA-BH-A1FM 2 In-Frame Intra-chr q24.1 q23.3 Seq+ 1443 ChimerSeq FusionScan TCGA_RNA-Seq NIPBL-NUP155 NIPBL chr5 37027514 + NUP155 chr5 37310845 - Exonic hg19 BRCA TCGA-BH-A1FM 2 In-Frame Intra-chr p13.2 p13.2 Seq+ 1444 ChimerSeq FusionScan TCGA_RNA-Seq GPR137B-ZNF669 GPR137B chr1 236306336 + ZNF669 chr1 247265093 - Exonic hg19 BRCA TCGA-A2-A0SX 2 Out-of-Frame Intra-chr q42.3 q44 Transcription factor 1445 ChimerSeq FusionScan TCGA_RNA-Seq ATXN1-PCTP ATXN1 chr6 16486202 - PCTP chr17 53844695 + Exonic hg19 BRCA TCGA-A8-A0AD 2 5'UTR-5'UTR Inter-chr p22.3 q22 Seq+ 1446 ChimerSeq FusionScan TCGA_RNA-Seq MAPT-MARCH10 MAPT chr17 44039836 + 2019_ 3_ 10_ chr17 60865960 - Exonic hg19 BRCA TCGA-A8-A0AD 2 Out-of-Frame Intra-chr q23.2 Seq+ 1447 ChimerSeq FusionScan TCGA_RNA-Seq BTBD9-FARS2 BTBD9 chr6 38312759 - FARS2 chr6 5545412 + Exonic hg19 BRCA TCGA-A8-A0AD 2 In-Frame Intra-chr p21.2 p25.1 Seq+ 1448 ChimerSeq FusionScan TCGA_RNA-Seq HDAC4-SIL1 HDAC4 chr2 240274372 - SIL1 chr5 138463542 - Exonic hg19 BRCA TCGA-D8-A3Z6 2 CDS-5'UTR Inter-chr q37.3 q31.2 1449 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-SLC30A8 PVT1 chr8 128806980 + SLC30A8 chr8 118165182 + Exonic hg19 BRCA TCGA-BH-A18L 12 5'UTR-CDS Intra-chr q24.21 q24.11 Seq+ 1450 ChimerSeq FusionScan TCGA_RNA-Seq MYSM1-APOM MYSM1 chr1 59160800 - APOM chr6 31624248 + Exonic hg19 BRCA TCGA-BH-A18L 6 CDS-3'UTR Inter-chr p32.1 Transcription factor Seq+ 1451 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-SLC30A8 PVT1 chr8 128806980 + SLC30A8 chr8 118173976 + Exonic hg19 BRCA TCGA-BH-A18L 3 5'UTR-CDS Intra-chr q24.21 q24.11 Seq+ 1452 ChimerSeq FusionScan TCGA_RNA-Seq AP2A2-TALDO1 AP2A2 chr11 984753 + TALDO1 chr11 755878 + Exonic hg19 BRCA TCGA-BH-A18L 3 In-Frame Intra-chr p15.5 p15.5 Seq+ 1453 ChimerSeq FusionScan TCGA_RNA-Seq MSH2-TMEM247 MSH2 chr2 47635694 + TMEM247 chr2 46711382 + Exonic hg19 BRCA TCGA-BH-A18L 3 Out-of-Frame Intra-chr p21 Oncogene Tumor suppressor gene p21 Seq+ 1454 ChimerSeq FusionScan TCGA_RNA-Seq TNS3-HSPA1L TNS3 chr7 47319761 - HSPA1L chr6 31779762 - Exonic hg19 BRCA TCGA-BH-A18L 3 CDS-5'UTR Inter-chr p12.3 Seq+ 1455 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-SLC30A8 PVT1 chr8 128806980 + SLC30A8 chr8 118169929 + Exonic hg19 BRCA TCGA-BH-A18L 3 5'UTR-CDS Intra-chr q24.21 q24.11 Seq+ 1456 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1L1-ANK1 WHSC1L1 chr8 38205014 - ANK1 chr8 41615655 - Exonic hg19 BRCA TCGA-E2-A15A 6 In-Frame Intra-chr p11.23 Tumor suppressor gene p11.21 Seq+ 1457 ChimerSeq FusionScan TCGA_RNA-Seq KAT6A-ADAM2 KAT6A chr8 41905895 - ADAM2 chr8 39624770 - Exonic hg19 BRCA TCGA-E2-A15A 6 In-Frame Intra-chr p11.21 Oncogene Seq+ 1458 ChimerSeq FusionScan TCGA_RNA-Seq KAT6A-ADAM2 KAT6A chr8 41905895 - ADAM2 chr8 39627094 - Exonic hg19 BRCA TCGA-E2-A15A 6 Out-of-Frame Intra-chr p11.21 Oncogene Seq+ 1459 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1L1-FGFR1 WHSC1L1 chr8 38239316 - FGFR1 chr8 38315052 - Exonic hg19 BRCA TCGA-E2-A15A 4 5'UTR-5'UTR Intra-chr p11.23 Tumor suppressor gene p11.23 TK:FGFR Oncogene Seq+ 1460 ChimerSeq FusionScan TCGA_RNA-Seq DYRK1A-KDM4B DYRK1A chr21 38739930 + KDM4B chr19 5039846 + Exonic hg19 BRCA TCGA-E2-A15A 4 5'UTR-CDS Inter-chr q22.13 CMGC:DYRK p13.3 Seq+ 1461 ChimerSeq FusionScan TCGA_RNA-Seq ATP1A1-VANGL1 ATP1A1 chr1 116916145 + VANGL1 chr1 116206281 + Exonic hg19 BRCA TCGA-E2-A15A 3 In-Frame Intra-chr p13.1 p13.1 Seq+ 1462 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC9-TTC18 DNAJC9 chr10 75003600 - TTC18 chr10 75016174 - Exonic hg19 BRCA TCGA-E2-A15A 2 In-Frame Intra-chr q22.2 Seq+ 1463 ChimerSeq FusionScan TCGA_RNA-Seq KAT6A-ADAM2 KAT6A chr8 41905895 - ADAM2 chr8 39646259 - Exonic hg19 BRCA TCGA-E2-A15A 2 In-Frame Intra-chr p11.21 Oncogene Seq+ 1464 ChimerSeq FusionScan TCGA_RNA-Seq ASH2L-C20orf72 ASH2L chr8 37971805 + C20orf72 chr20 17968808 + Exonic hg19 BRCA TCGA-E2-A15A 2 Out-of-Frame Inter-chr p11.23 Seq+ 1465 ChimerSeq FusionScan TCGA_RNA-Seq FAM168A-UVRAG FAM168A chr11 73308967 - UVRAG chr11 75572790 + Exonic hg19 BRCA TCGA-E2-A15A 2 5'UTR-CDS Intra-chr q13.4 q13.5 Tumor suppressor gene Seq+ 1466 ChimerSeq FusionScan TCGA_RNA-Seq SNHG4-SON SNHG4 chr5 138614818 + SON chr21 34931535 + Exonic hg19 BRCA TCGA-A8-A0A6 2 5'UTR-CDS Inter-chr q31.2 q22.11 Transcription factor 1467 ChimerSeq FusionScan TCGA_RNA-Seq NEDD4L-TLN2 NEDD4L chr18 55711940 + TLN2 chr15 63063162 + Exonic hg19 BRCA TCGA-A8-A06P 2 In-Frame Inter-chr q21.31 Tumor suppressor gene q22.2 Seq+ 1468 ChimerSeq FusionScan TCGA_RNA-Seq FDFT1-INTS9 FDFT1 chr8 11660440 + INTS9 chr8 28707790 - Exonic hg19 BRCA TCGA-E2-A15K 2 Out-of-Frame Intra-chr p23.1 p21.1 Seq+ 1469 ChimerSeq FusionScan TCGA_RNA-Seq CDK13-C7orf10 CDK13 chr7 40041630 + C7orf10 chr7 40899914 + Exonic hg19 BRCA TCGA-A7-A6VW 7 In-Frame Intra-chr p14.1 Seq+ 1470 ChimerSeq FusionScan TCGA_RNA-Seq SYNJ2-GTF2H5 SYNJ2 chr6 158438322 + GTF2H5 chr6 158591501 + Exonic hg19 BRCA TCGA-A7-A6VW 4 5'UTR-5'UTR Intra-chr q25.3 q25.3 Seq+ 1471 ChimerSeq FusionScan TCGA_RNA-Seq CDK13-C7orf10 CDK13 chr7 40085624 + C7orf10 chr7 40899914 + Exonic hg19 BRCA TCGA-A7-A6VW 3 Out-of-Frame Intra-chr p14.1 Seq+ 1472 ChimerSeq FusionScan TCGA_RNA-Seq CALD1-PFDN6 CALD1 chr7 134650137 + PFDN6 chr6 33257546 + Exonic hg19 BRCA TCGA-A7-A6VW 2 CDS-5'UTR Inter-chr q33 1473 ChimerSeq FusionScan TCGA_RNA-Seq SYNJ2-GTF2H5 SYNJ2 chr6 158438322 + GTF2H5 chr6 158613008 + Exonic hg19 BRCA TCGA-A7-A6VW 2 Out-of-Frame Intra-chr q25.3 q25.3 Seq+ 1474 ChimerSeq FusionScan TCGA_RNA-Seq SACM1L-ANAPC13 SACM1L chr3 45730989 + ANAPC13 chr3 134201773 - Exonic hg19 BRCA TCGA-BH-A18P 7 CDS-5'UTR Intra-chr p21.31 q22.2 Seq+ 1475 ChimerSeq FusionScan TCGA_RNA-Seq PCMTD1-UBE2E1 PCMTD1 chr8 52758220 - UBE2E1 chr3 23852950 + Exonic hg19 BRCA TCGA-BH-A18P 2 In-Frame Inter-chr q11.23 p24.2 1476 ChimerSeq FusionScan TCGA_RNA-Seq DHRS1-SCAMP3 DHRS1 chr14 24768162 - SCAMP3 chr1 155230450 - Exonic hg19 BRCA TCGA-AR-A0U0 2 In-Frame Inter-chr q12 1477 ChimerSeq FusionScan TCGA_RNA-Seq DUSP16-CREBL2 DUSP16 chr12 12715050 - CREBL2 chr12 12788710 + Exonic hg19 BRCA TCGA-AR-A0U0 2 5'UTR-CDS Intra-chr p13.1 Transcription factor 1478 ChimerSeq FusionScan TCGA_RNA-Seq ASXL2-FKBP8 ASXL2 chr2 26068349 - FKBP8 chr19 18652805 - Exonic hg19 BRCA TCGA-AR-A0U0 2 CDS-5'UTR Inter-chr p23.3 p13.11 Seq+ 1479 ChimerSeq FusionScan TCGA_RNA-Seq MACROD1-PITPNM1 MACROD1 chr11 63918710 - PITPNM1 chr11 67267892 - Exonic hg19 BRCA TCGA-AC-A4ZE 3 In-Frame Intra-chr q13.1 q13.2 Seq+ 1480 ChimerSeq FusionScan TCGA_RNA-Seq SPTBN2-PRIM2 SPTBN2 chr11 66472068 - PRIM2 chr6 57467079 + Exonic hg19 BRCA TCGA-AC-A4ZE 2 Out-of-Frame Inter-chr q13.2 p11.2 Seq+ 1481 ChimerSeq FusionScan TCGA_RNA-Seq C17orf62-TLE3 C17orf62 chr17 80408575 - TLE3 chr15 70388600 - Exonic hg19 BRCA TCGA-A1-A0SD 2 5'UTR-CDS Inter-chr q25.3 q23 1482 ChimerSeq FusionScan TCGA_RNA-Seq FAM82B-ESRP1 FAM82B chr8 87519223 - ESRP1 chr8 95674728 + Exonic hg19 BRCA TCGA-AR-A0TY 5 In-Frame Intra-chr q22.1 Tumor suppressor gene Seq+ 1483 ChimerSeq FusionScan TCGA_RNA-Seq TNFRSF10A-BIN3 TNFRSF10A chr8 23069628 - BIN3 chr8 22502316 - Exonic hg19 BRCA TCGA-AR-A0TY 3 Out-of-Frame Intra-chr p21.3 Tumor suppressor gene p21.3 Seq+ 1484 ChimerSeq FusionScan TCGA_RNA-Seq DNM2-SMARCA4 DNM2 chr19 10829079 + SMARCA4 chr19 11132400 + Exonic hg19 BRCA TCGA-AR-A0TY 2 Out-of-Frame Intra-chr p13.2 p13.2 Oncogene Tumor suppressor gene Seq+ 1485 ChimerSeq FusionScan TCGA_RNA-Seq TAOK1-EFCAB5 TAOK1 chr17 27844674 + EFCAB5 chr17 28434851 + Exonic hg19 BRCA TCGA-AR-A0TY 2 Out-of-Frame Intra-chr q11.2 q11.2 Seq+ 1486 ChimerSeq FusionScan TCGA_RNA-Seq NSMAF-DEPTOR NSMAF chr8 59535778 - DEPTOR chr8 120940639 + Exonic hg19 BRCA TCGA-AR-A0TY 2 In-Frame Intra-chr q12.1 q24.12 Seq+ 1487 ChimerSeq FusionScan TCGA_RNA-Seq PMEPA1-PIGP PMEPA1 chr20 56284529 - PIGP chr21 38444837 - Exonic hg19 BRCA TCGA-BH-A1FE 4 CDS-5'UTR Inter-chr q13.31 q22.13 Seq+ 1488 ChimerSeq FusionScan TCGA_RNA-Seq QSER1-GAS2 QSER1 chr11 32914880 + GAS2 chr11 22747837 + Exonic hg19 BRCA TCGA-B6-A0WT 2 5'UTR-CDS Intra-chr p13 p14.3 Seq+ 1489 ChimerSeq FusionScan TCGA_RNA-Seq MYO1D-TMIGD1 MYO1D chr17 31203795 - TMIGD1 chr17 28656547 - Exonic hg19 BRCA TCGA-E2-A1LB 3 Out-of-Frame Intra-chr q11.2 q11.2 Seq+ 1490 ChimerSeq FusionScan TCGA_RNA-Seq RHOA-C3orf43 RHOA chr3 49449252 - C3orf43 chr3 196236540 - Exonic hg19 BRCA TCGA-EW-A6SB 2 5'UTR-CDS Intra-chr p21.31 Oncogene Tumor suppressor gene Seq+ 1491 ChimerSeq FusionScan TCGA_RNA-Seq TRPS1-SPAG1 TRPS1 chr8 116599227 - SPAG1 chr8 101252630 + Exonic hg19 BRCA TCGA-EW-A6SB 2 In-Frame Intra-chr q23.3 Transcription factor q22.2 Seq+ 1492 ChimerSeq FusionScan TCGA_RNA-Seq TXNDC16-GPR137C TXNDC16 chr14 52936754 - GPR137C chr14 53098877 + Exonic hg19 BRCA TCGA-C8-A26V 3 Out-of-Frame Intra-chr q22.1 q22.1 Seq+ 1493 ChimerSeq FusionScan TCGA_RNA-Seq GABPB1-GALK2 GABPB1 chr15 50647181 - GALK2 chr15 49611800 + Exonic hg19 BRCA TCGA-C8-A12T 4 5'UTR-CDS Intra-chr q21.2 q21.1 Seq+ 1494 ChimerSeq FusionScan TCGA_RNA-Seq ZNF341-DYNLRB1 ZNF341 chr20 32345128 + DYNLRB1 chr20 33128384 + Exonic hg19 BRCA TCGA-C8-A12T 4 In-Frame Intra-chr q11.22 Transcription factor q11.22 Seq+ 1495 ChimerSeq FusionScan TCGA_RNA-Seq RBL1-NDRG3 RBL1 chr20 35651052 - NDRG3 chr20 35335410 - Exonic hg19 BRCA TCGA-C8-A12T 2 In-Frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 1496 ChimerSeq FusionScan TCGA_RNA-Seq TGIF2-NDRG3 TGIF2 chr20 35202055 + NDRG3 chr20 35299800 - Exonic hg19 BRCA TCGA-LL-A441 3 5'UTR-CDS Intra-chr q11.23 Transcription factor q11.23 Seq+ 1497 ChimerSeq FusionScan TCGA_RNA-Seq TGIF2-NDRG3 TGIF2 chr20 35202148 + NDRG3 chr20 35299800 - Exonic hg19 BRCA TCGA-LL-A441 3 5'UTR-CDS Intra-chr q11.23 Transcription factor q11.23 Seq+ 1498 ChimerSeq FusionScan TCGA_RNA-Seq ETV6-LOH12CR1 ETV6 chr12 11905513 + LOH12CR1 chr12 12588561 + Exonic hg19 BRCA TCGA-LL-A441 2 In-Frame Intra-chr p13.2 Tumor suppressor gene Transcription factor Seq+ 1499 ChimerSeq FusionScan TCGA_RNA-Seq RALGAPB-C20orf152 RALGAPB chr20 37101712 + C20orf152 chr20 34618278 + Exonic hg19 BRCA TCGA-LL-A441 2 5'UTR-CDS Intra-chr q11.23 Seq+ 1500 ChimerSeq FusionScan TCGA_RNA-Seq ILF3-SLC44A2 ILF3 chr19 10765163 + SLC44A2 chr19 10736928 + Exonic hg19 BRCA TCGA-AO-A124 6 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 1501 ChimerSeq FusionScan TCGA_RNA-Seq SMC5-IMMP2L SMC5 chr9 72882891 + IMMP2L chr7 110603621 - Exonic hg19 BRCA TCGA-AO-A124 5 In-Frame Inter-chr q21.12 q31.1 Seq+ 1502 ChimerSeq FusionScan TCGA_RNA-Seq KDM5A-NINJ2 KDM5A chr12 404738 - NINJ2 chr12 675344 - Exonic hg19 BRCA TCGA-AO-A124 2 In-Frame Intra-chr p13.33 Tumor suppressor gene p13.33 Seq+ 1503 ChimerSeq FusionScan TCGA_RNA-Seq SEMA4C-WNT5B SEMA4C chr2 97529418 - WNT5B chr12 1740463 + Exonic hg19 BRCA TCGA-AO-A124 2 CDS-5'UTR Inter-chr q11.2 p13.33 Seq+ 1504 ChimerSeq FusionScan TCGA_RNA-Seq TESK2-GPR37L1 TESK2 chr1 45923235 - GPR37L1 chr1 202096868 + Exonic hg19 BRCA TCGA-AO-A124 2 In-Frame Intra-chr p34.1 TKL:LISK q32.1 Seq+ 1505 ChimerSeq FusionScan TCGA_RNA-Seq ATP11A-MCF2L ATP11A chr13 113344769 + MCF2L chr13 113728757 + Exonic hg19 BRCA TCGA-A2-A3XT 3 In-Frame Intra-chr q34 q34 Seq+ 1506 ChimerSeq FusionScan TCGA_RNA-Seq ACTN4-DAZAP1 ACTN4 chr19 39138547 + DAZAP1 chr19 1417498 + Exonic hg19 BRCA TCGA-A2-A3XT 2 Out-of-Frame Intra-chr p13.3 1507 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-SNHG15 RCC1 chr1 28834672 + SNHG15 chr7 45024025 - Exonic hg19 BRCA TCGA-A2-A3XT 2 5'UTR-3'UTR Inter-chr p35.3 p13 1508 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-AR-A24X 3 5'UTR-5'UTR Inter-chr p13.2 p22 1509 ChimerSeq FusionScan TCGA_RNA-Seq RAB18-DCLRE1C RAB18 chr10 27798859 + DCLRE1C chr10 14974954 - Exonic hg19 BRCA TCGA-E9-A1QZ 2 Out-of-Frame Intra-chr p12.1 p13 1510 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175394270 - Exonic hg19 BRCA TCGA-E9-A1QZ 2 5'UTR-CDS Inter-chr q21.1 q35.2 1511 ChimerSeq FusionScan TCGA_RNA-Seq NOMO3-TFAP4 NOMO3 chr16 16350015 + TFAP4 chr16 4312702 - Exonic hg19 BRCA TCGA-S3-AA0Z 4 In-Frame Intra-chr p13.11 p13.3 Transcription factor Seq+ 1512 ChimerSeq FusionScan TCGA_RNA-Seq BCL7C-OTOA BCL7C chr16 30900180 - OTOA chr16 21702904 + Exonic hg19 BRCA TCGA-S3-AA0Z 3 Out-of-Frame Intra-chr p11.2 p12.2 Seq+ 1513 ChimerSeq FusionScan TCGA_RNA-Seq GPRC5B-C16orf96 GPRC5B chr16 19873158 - C16orf96 chr16 4621561 + Exonic hg19 BRCA TCGA-S3-AA0Z 2 In-Frame Intra-chr p12.3 p13.3 Seq+ 1514 ChimerSeq FusionScan TCGA_RNA-Seq PSMD11-CEP112 PSMD11 chr17 30774064 + CEP112 chr17 64179425 - Exonic hg19 BRCA TCGA-A8-A08J 4 CDS-5'UTR Intra-chr q11.2 q24.1 Seq+ 1515 ChimerSeq FusionScan TCGA_RNA-Seq BCAS3-VMP1 BCAS3 chr17 58988063 + VMP1 chr17 57895072 + Exonic hg19 BRCA TCGA-A8-A08J 4 In-Frame Intra-chr q23.2 q23.1 Seq+ 1516 ChimerSeq FusionScan TCGA_RNA-Seq PTRH2-RHBDL3 PTRH2 chr17 57784731 - RHBDL3 chr17 30621312 + Exonic hg19 BRCA TCGA-A8-A08J 3 5'UTR-CDS Intra-chr q23.1 q11.2 Seq+ 1517 ChimerSeq FusionScan TCGA_RNA-Seq PWP2-SFSWAP PWP2 chr21 45537844 + SFSWAP chr12 132271007 + Exonic hg19 BRCA TCGA-A8-A08J 3 In-Frame Inter-chr q22.3 q24.33 Seq+ 1518 ChimerSeq FusionScan TCGA_RNA-Seq SRGAP2P2-LONP2 SRGAP2P2 chr1 144014093 + LONP2 chr16 48368126 + Exonic hg19 BRCA TCGA-A8-A08J 2 5'UTR-CDS Inter-chr q12.1 1519 ChimerSeq FusionScan TCGA_RNA-Seq UBE2G1-SPNS3 UBE2G1 chr17 4269565 - SPNS3 chr17 4381866 + Exonic hg19 BRCA TCGA-A8-A08J 2 Out-of-Frame Intra-chr p13.2 p13.2 Seq+ 1520 ChimerSeq FusionScan TCGA_RNA-Seq ZFP91-RAB6A ZFP91 chr11 58352357 + RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-A8-A08J 2 Out-of-Frame Intra-chr q12.1 Transcription factor q13.4 Seq+ 1521 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD30A-C15orf33 ANKRD30A chr10 37470444 + C15orf33 chr15 49624046 - Exonic hg19 BRCA TCGA-EW-A423 2 Out-of-Frame Inter-chr p11.21 1522 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD30A-C15orf33 ANKRD30A chr10 37447514 + C15orf33 chr15 49624046 - Exonic hg19 BRCA TCGA-EW-A423 2 Out-of-Frame Inter-chr p11.21 1523 ChimerSeq FusionScan TCGA_RNA-Seq TLK2-PITPNC1 TLK2 chr17 60558567 + PITPNC1 chr17 65528917 + Exonic hg19 BRCA TCGA-D8-A27G 7 In-Frame Intra-chr q23.2 Other:TLK q24.2 Seq+ 1524 ChimerSeq FusionScan TCGA_RNA-Seq KPNB1-SKAP1 KPNB1 chr17 45748198 + SKAP1 chr17 46239931 - Exonic hg19 BRCA TCGA-D8-A27G 6 Out-of-Frame Intra-chr q21.32 q21.32 Seq+ 1525 ChimerSeq FusionScan TCGA_RNA-Seq CLNS1A-AQP11 CLNS1A chr11 77336007 - AQP11 chr11 77314600 + Exonic hg19 BRCA TCGA-D8-A27G 5 In-Frame Intra-chr q14.1 q14.1 Seq+ 1526 ChimerSeq FusionScan TCGA_RNA-Seq ATP5G1-USP6 ATP5G1 chr17 46970202 + USP6 chr17 5048699 + Exonic hg19 BRCA TCGA-AN-A04A 3 5'UTR-CDS Intra-chr q21.32 p13.2 1527 ChimerSeq FusionScan TCGA_RNA-Seq TSC22D1-MLL5 TSC22D1 chr13 45147298 - MLL5 chr7 104730455 + Exonic hg19 BRCA TCGA-BH-A0DK 2 In-Frame Inter-chr q14.11 Tumor suppressor gene Transcription factor 1528 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-OTOP3 CLTC chr17 57761117 + OTOP3 chr17 72942755 + Exonic hg19 BRCA TCGA-EW-A1J1 5 Out-of-Frame Intra-chr q23.1 q25.1 Seq+ 1529 ChimerSeq FusionScan TCGA_RNA-Seq USP6-ELOF1 USP6 chr17 5052062 + ELOF1 chr19 11665180 - Exonic hg19 BRCA TCGA-EW-A1J1 5 CDS-5'UTR Inter-chr p13.2 p13.2 Seq+ 1530 ChimerSeq FusionScan TCGA_RNA-Seq ATP6V0A1-MSI2 ATP6V0A1 chr17 40635149 + MSI2 chr17 55607036 + Exonic hg19 BRCA TCGA-EW-A1J1 2 In-Frame Intra-chr q21.2 q22 Seq+ 1531 ChimerSeq FusionScan TCGA_RNA-Seq KAT6A-MSR1 KAT6A chr8 41905895 - MSR1 chr8 16035501 - Exonic hg19 BRCA TCGA-BH-A202 5 CDS-5'UTR Intra-chr p11.21 Oncogene p22 Seq+ 1532 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-PGAP3 GRB7 chr17 37899307 + PGAP3 chr17 37842272 - Exonic hg19 BRCA TCGA-BH-A202 5 In-Frame Intra-chr q12 q12 Oncogene Seq+ 1533 ChimerSeq FusionScan TCGA_RNA-Seq RARA-WIPF2 RARA chr17 38487648 + WIPF2 chr17 38430041 + Exonic hg19 BRCA TCGA-BH-A202 4 In-Frame Intra-chr q21.2 Oncogene Transcription factor q21.2 Seq+ 1534 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-PGAP3 GRB7 chr17 37898969 + PGAP3 chr17 37842272 - Exonic hg19 BRCA TCGA-BH-A202 3 Out-of-Frame Intra-chr q12 q12 Oncogene Seq+ 1535 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-PGAP3 GRB7 chr17 37898709 + PGAP3 chr17 37842272 - Exonic hg19 BRCA TCGA-BH-A202 2 Out-of-Frame Intra-chr q12 q12 Oncogene Seq+ 1536 ChimerSeq FusionScan TCGA_RNA-Seq PHKG2-RPL27 PHKG2 chr16 30759811 + RPL27 chr17 41150765 + Exonic hg19 BRCA TCGA-GM-A2DB 3 5'UTR-5'UTR Inter-chr p11.2 q21.31 Seq+ 1537 ChimerSeq FusionScan TCGA_RNA-Seq ZC3H4-POLR2I ZC3H4 chr19 47597226 - POLR2I chr19 36605314 - Exonic hg19 BRCA TCGA-GM-A2DB 3 In-Frame Intra-chr q13.32 q13.12 Seq+ 1538 ChimerSeq FusionScan TCGA_RNA-Seq ZC3H4-POLR2I ZC3H4 chr19 47597226 - POLR2I chr19 36605615 - Exonic hg19 BRCA TCGA-GM-A2DB 2 Out-of-Frame Intra-chr q13.32 q13.12 Seq+ 1539 ChimerSeq FusionScan TCGA_RNA-Seq CPT1A-GDPD4 CPT1A chr11 68571467 - GDPD4 chr11 76998463 - Exonic hg19 BRCA TCGA-A8-A086 2 CDS-5'UTR Intra-chr q13.3 q13.5 Seq+ 1540 ChimerSeq FusionScan TCGA_RNA-Seq NUMA1-PTH NUMA1 chr11 71791503 - PTH chr11 13514407 - Exonic hg19 BRCA TCGA-A8-A086 2 5'UTR-5'UTR Intra-chr q13.4 Oncogene p15.3 Seq+ 1541 ChimerSeq FusionScan TCGA_RNA-Seq SOS2-NEMF SOS2 chr14 50697914 - NEMF chr14 50262662 - Exonic hg19 BRCA TCGA-AN-A0FF 3 Out-of-Frame Intra-chr q21.3 q21.3 Seq+ 1542 ChimerSeq FusionScan TCGA_RNA-Seq DNAL1-FCF1 DNAL1 chr14 74121588 + FCF1 chr14 75199433 + Exonic hg19 BRCA TCGA-BH-A0B8 2 Out-of-Frame Intra-chr q24.3 q24.3 1543 ChimerSeq FusionScan TCGA_RNA-Seq C16orf5-HMOX2 C16orf5 chr16 4588702 - HMOX2 chr16 4533637 + Exonic hg19 BRCA TCGA-A7-A3J0 2 5'UTR-5'UTR Intra-chr p13.3 1544 ChimerSeq FusionScan TCGA_RNA-Seq USP32-PCTP USP32 chr17 58469242 - PCTP chr17 53844695 + Exonic hg19 BRCA TCGA-A8-A09G 4 Out-of-Frame Intra-chr q23.2 q22 Seq+ 1545 ChimerSeq FusionScan TCGA_RNA-Seq FXR1-PROS1 FXR1 chr3 180630524 + PROS1 chr3 93629549 - Exonic hg19 BRCA TCGA-A8-A09G 2 Out-of-Frame Intra-chr q26.33 q11.1 1546 ChimerSeq FusionScan TCGA_RNA-Seq LRRC8D-C1orf168 LRRC8D chr1 90309341 + C1orf168 chr1 57233611 - Exonic hg19 BRCA TCGA-A8-A09G 2 5'UTR-CDS Intra-chr p22.2 p32.2 Seq+ 1547 ChimerSeq FusionScan TCGA_RNA-Seq LRP12-TRAPPC9 LRP12 chr8 105544134 - TRAPPC9 chr8 141034176 - Exonic hg19 BRCA TCGA-E2-A14X 4 Out-of-Frame Intra-chr q22.3 q24.3 Seq+ 1548 ChimerSeq FusionScan TCGA_RNA-Seq ATP8B1-COG7 ATP8B1 chr18 55317598 - COG7 chr16 23428442 - Exonic hg19 BRCA TCGA-AN-A0XT 2 In-Frame Inter-chr q21.31 p12.2 1549 ChimerSeq FusionScan TCGA_RNA-Seq SBNO2-SERINC2 SBNO2 chr19 1149367 - SERINC2 chr1 31905813 + Exonic hg19 BRCA TCGA-AN-A0XT 2 In-Frame Inter-chr p13.3 p35.2 Seq+ 1550 ChimerSeq FusionScan TCGA_RNA-Seq ULK2-DOCK6 ULK2 chr17 19741813 - DOCK6 chr19 11364402 - Exonic hg19 BRCA TCGA-AN-A0XT 2 Out-of-Frame Inter-chr p11.2 Other:ULK p13.2 Seq+ 1551 ChimerSeq FusionScan TCGA_RNA-Seq BIVM-HNRNPH1 BIVM chr13 103451871 + HNRNPH1 chr5 179050165 - Exonic hg19 BRCA TCGA-C8-A131 2 5'UTR-5'UTR Inter-chr q33.1 q35.3 1552 ChimerSeq FusionScan TCGA_RNA-Seq ST3GAL1-GNAI3 ST3GAL1 chr8 134558016 - GNAI3 chr1 110116358 + Exonic hg19 BRCA TCGA-C8-A131 2 5'UTR-CDS Inter-chr q24.22 p13.3 1553 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R2A-BNIP3L PPP2R2A chr8 26151256 + BNIP3L chr8 26248758 + Exonic hg19 BRCA TCGA-AC-A6IW 6 In-Frame Intra-chr p21.2 p21.2 Tumor suppressor gene Seq+ 1554 ChimerSeq FusionScan TCGA_RNA-Seq RAP1GAP-NIT2 RAP1GAP chr1 21936067 - NIT2 chr3 100073615 + Exonic hg19 BRCA TCGA-AC-A6IW 3 Out-of-Frame Inter-chr p36.12 Tumor suppressor gene q12.2 Tumor suppressor gene Seq+ 1555 ChimerSeq FusionScan TCGA_RNA-Seq ATXN1-HMGCLL1 ATXN1 chr6 16486202 - HMGCLL1 chr6 55406938 - Exonic hg19 BRCA TCGA-E9-A5UO 2 5'UTR-CDS Intra-chr p22.3 p12.1 Seq+ 1556 ChimerSeq FusionScan TCGA_RNA-Seq DSN1-CNKSR1 DSN1 chr20 35402064 - CNKSR1 chr1 26515262 + Exonic hg19 BRCA TCGA-E9-A5UO 2 5'UTR-5'UTR Inter-chr q11.23 p36.11 1557 ChimerSeq FusionScan TCGA_RNA-Seq CHD8-TOX4 CHD8 chr14 21898959 - TOX4 chr14 21957331 + Exonic hg19 BRCA TCGA-AO-A128 2 In-Frame Intra-chr q11.2 q11.2 Seq+ 1558 ChimerSeq FusionScan TCGA_RNA-Seq RNF216-RSPH10B RNF216 chr7 5751391 - RSPH10B chr7 6829261 + Exonic hg19 BRCA TCGA-AO-A128 2 In-Frame Intra-chr p22.1 p22.1 1559 ChimerSeq FusionScan TCGA_RNA-Seq LINC00152-RUFY1 LINC00152 chr2 87755164 + RUFY1 chr5 179028892 + Exonic hg19 BRCA TCGA-EW-A1P8 3 5'UTR-CDS Inter-chr 1560 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-BH-A0HO 2 5'UTR-5'UTR Inter-chr p13.2 p22 1561 ChimerSeq FusionScan TCGA_RNA-Seq B3GALNT2-BMPR1B B3GALNT2 chr1 235657990 - BMPR1B chr4 96046133 + Exonic hg19 BRCA TCGA-E2-A1IU 2 In-Frame Inter-chr q22.3 TKL:STKR 1562 ChimerSeq FusionScan TCGA_RNA-Seq GLG1-COG4 GLG1 chr16 74640554 - COG4 chr16 70553634 - Exonic hg19 BRCA TCGA-BH-A1F8 6 In-Frame Intra-chr q23.1 q22.1 Seq+ 1563 ChimerSeq FusionScan TCGA_RNA-Seq TNFRSF1A-UBC TNFRSF1A chr12 6450941 - UBC chr12 125398320 - Exonic hg19 BRCA TCGA-BH-A1F8 2 CDS-5'UTR Intra-chr p13.31 q24.31 1564 ChimerSeq FusionScan TCGA_RNA-Seq C18orf32-DYM C18orf32 chr18 47013576 - DYM chr18 46956817 - Exonic hg19 BRCA TCGA-BH-A1F8 2 5'UTR-5'UTR Intra-chr q21.1 q21.1 1565 ChimerSeq FusionScan TCGA_RNA-Seq TAF15-AP2B1 TAF15 chr17 34151202 + AP2B1 chr17 33966613 + Exonic hg19 BRCA TCGA-AN-A049 5 In-Frame Intra-chr q12 q12 Seq+ 1566 ChimerSeq FusionScan TCGA_RNA-Seq MECR-NAALADL2 MECR chr1 29557242 - NAALADL2 chr3 175473007 + Exonic hg19 BRCA TCGA-AN-A049 2 Out-of-Frame Inter-chr p35.3 q26.31 Seq+ 1567 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-LYZ FRS2 chr12 69925836 + LYZ chr12 69743887 + Exonic hg19 BRCA TCGA-A8-A06Z 18 5'UTR-CDS Intra-chr q15 q15 Seq+ 1568 ChimerSeq FusionScan TCGA_RNA-Seq TMEM135-CLMP TMEM135 chr11 86802437 + CLMP chr11 122955421 - Exonic hg19 BRCA TCGA-A8-A06Z 4 In-Frame Intra-chr q14.2 q24.1 Seq+ 1569 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-LYZ FRS2 chr12 69925836 + LYZ chr12 69745999 + Exonic hg19 BRCA TCGA-A8-A06Z 4 5'UTR-CDS Intra-chr q15 q15 Seq+ 1570 ChimerSeq FusionScan TCGA_RNA-Seq SLC43A2-SMG6 SLC43A2 chr17 1516488 - SMG6 chr17 2187029 - Exonic hg19 BRCA TCGA-A8-A06Z 2 In-Frame Intra-chr p13.3 Seq+ 1571 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP32-AHNAK ARHGAP32 chr11 128993340 - AHNAK chr11 62201363 - Exonic hg19 BRCA TCGA-A8-A06Z 2 Out-of-Frame Intra-chr q24.3 q12.3 Tumor suppressor gene Seq+ 1572 ChimerSeq FusionScan TCGA_RNA-Seq PDPK1-MAPK8IP3 PDPK1 chr16 2616454 + MAPK8IP3 chr16 1809958 + Exonic hg19 BRCA TCGA-A8-A06Z 2 In-Frame Intra-chr p13.3 p13.3 Seq+ 1573 ChimerSeq FusionScan TCGA_RNA-Seq USP22-SPACA3 USP22 chr17 20945977 - SPACA3 chr17 31323860 + Exonic hg19 BRCA TCGA-A8-A06Z 2 Out-of-Frame Intra-chr p11.2 q11.2 Seq+ 1574 ChimerSeq FusionScan TCGA_RNA-Seq VMP1-MARCH10 VMP1 chr17 57895134 + 2019_ 3_ 10_ chr17 60788705 - Exonic hg19 BRCA TCGA-AO-A0J5 3 Out-of-Frame Intra-chr q23.1 q23.2 Seq+ 1575 ChimerSeq FusionScan TCGA_RNA-Seq CYB561-USP32 CYB561 chr17 61523605 - USP32 chr17 58422969 - Exonic hg19 BRCA TCGA-AO-A0J5 2 5'UTR-CDS Intra-chr q23.3 q23.2 Seq+ 1576 ChimerSeq FusionScan TCGA_RNA-Seq USP32-RAD51C USP32 chr17 58469242 - RAD51C chr17 56774053 + Exonic hg19 BRCA TCGA-AO-A0J5 2 Out-of-Frame Intra-chr q23.2 q22 Tumor suppressor gene Seq+ 1577 ChimerSeq FusionScan TCGA_RNA-Seq USP32-RAD51C USP32 chr17 58469242 - RAD51C chr17 56772291 + Exonic hg19 BRCA TCGA-AO-A0J5 2 In-Frame Intra-chr q23.2 q22 Tumor suppressor gene Seq+ 1578 ChimerSeq FusionScan TCGA_RNA-Seq DDB1-C11orf10 DDB1 chr11 61076454 - C11orf10 chr11 61556707 - Exonic hg19 BRCA TCGA-AR-A256 5 CDS-3'UTR Intra-chr q12.2 Seq+ 1579 ChimerSeq FusionScan TCGA_RNA-Seq CCNY-DENND1A CCNY chr10 35626135 + DENND1A chr9 126520101 - Exonic hg19 BRCA TCGA-AR-A256 5 Out-of-Frame Inter-chr p11.21 q33.3 Seq+ 1580 ChimerSeq FusionScan TCGA_RNA-Seq TIA1-TGFA TIA1 chr2 70475536 - TGFA chr2 70692865 - Exonic hg19 BRCA TCGA-AR-A256 4 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 1581 ChimerSeq FusionScan TCGA_RNA-Seq CHMP4B-CBFA2T2 CHMP4B chr20 32399464 + CBFA2T2 chr20 32232152 + Exonic hg19 BRCA TCGA-AR-A256 4 Out-of-Frame Intra-chr q11.22 q11.21 Seq+ 1582 ChimerSeq FusionScan TCGA_RNA-Seq ST14-ST7 ST14 chr11 130029955 + ST7 chr7 116739815 + Exonic hg19 BRCA TCGA-AR-A256 4 Out-of-Frame Inter-chr q24.3 q31.2 Tumor suppressor gene Seq+ 1583 ChimerSeq FusionScan TCGA_RNA-Seq EXOC4-SLC25A13 EXOC4 chr7 133059756 + SLC25A13 chr7 95776008 - Exonic hg19 BRCA TCGA-AR-A256 3 In-Frame Intra-chr q33 q21.3 Seq+ 1584 ChimerSeq FusionScan TCGA_RNA-Seq SMARCA4-ICAM1 SMARCA4 chr19 11071850 + ICAM1 chr19 10385440 + Exonic hg19 BRCA TCGA-AR-A256 3 5'UTR-CDS Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 1585 ChimerSeq FusionScan TCGA_RNA-Seq CCNY-DENND1A CCNY chr10 35626135 + DENND1A chr9 126439068 - Exonic hg19 BRCA TCGA-AR-A256 2 Out-of-Frame Inter-chr p11.21 q33.3 Seq+ 1586 ChimerSeq FusionScan TCGA_RNA-Seq TSC2-TMEM204 TSC2 chr16 2098066 + TMEM204 chr16 1604782 + Exonic hg19 BRCA TCGA-AR-A256 2 5'UTR-CDS Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 1587 ChimerSeq FusionScan TCGA_RNA-Seq TIA1-TGFA TIA1 chr2 70475536 - TGFA chr2 70692868 - Exonic hg19 BRCA TCGA-AR-A256 2 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 1588 ChimerSeq FusionScan TCGA_RNA-Seq RCAN1-RUNX1 RCAN1 chr21 35987058 - RUNX1 chr21 36171759 - Exonic hg19 BRCA TCGA-AR-A256 2 Out-of-Frame Intra-chr q22.12 q22.12 Oncogene Tumor suppressor gene Transcription factor Seq+ 1589 ChimerSeq FusionScan TCGA_RNA-Seq CPT1A-ADAM2 CPT1A chr11 68540732 - ADAM2 chr8 39607263 - Exonic hg19 BRCA TCGA-E2-A15R 5 In-Frame Inter-chr q13.3 Seq+ 1590 ChimerSeq FusionScan TCGA_RNA-Seq E2F3-AKIRIN2 E2F3 chr6 20404063 + AKIRIN2 chr6 88391481 - Exonic hg19 BRCA TCGA-A2-A3XX 4 Out-of-Frame Intra-chr p22.3 Tumor suppressor gene Transcription factor q15 Seq+ 1591 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BRCA TCGA-A2-A3XX 2 Out-of-Frame Intra-chr q22.2 q22.2 1592 ChimerSeq FusionScan TCGA_RNA-Seq URI1-IL29 URI1 chr19 30433571 + IL29 chr19 39787444 + Exonic hg19 BRCA TCGA-A2-A3XX 2 In-Frame Intra-chr q12 1593 ChimerSeq FusionScan TCGA_RNA-Seq ZNF251-FAHD2A ZNF251 chr8 145979067 - FAHD2A chr2 96071300 + Exonic hg19 BRCA TCGA-AR-A251 3 CDS-5'UTR Inter-chr Transcription factor q11.1 1594 ChimerSeq FusionScan TCGA_RNA-Seq PRUNE2-GNAQ PRUNE2 chr9 79438547 - GNAQ chr9 80412564 - Exonic hg19 BRCA TCGA-AR-A251 3 Out-of-Frame Intra-chr q21.2 q21.2 Oncogene Seq+ 1595 ChimerSeq FusionScan TCGA_RNA-Seq CGNL1-TCF12 CGNL1 chr15 57754090 + TCF12 chr15 57578354 + Exonic hg19 BRCA TCGA-AR-A251 2 CDS-3'UTR Intra-chr q21.3 q21.3 Oncogene Transcription factor Seq+ 1596 ChimerSeq FusionScan TCGA_RNA-Seq PRPSAP1-ST6GALNAC2 PRPSAP1 chr17 74344609 - ST6GALNAC2 chr17 74574898 - Exonic hg19 BRCA TCGA-AR-A251 2 Out-of-Frame Intra-chr q25.1 q25.1 Seq+ 1597 ChimerSeq FusionScan TCGA_RNA-Seq ELK3-AMDHD1 ELK3 chr12 96617551 + AMDHD1 chr12 96346494 + Exonic hg19 BRCA TCGA-AR-A251 2 Out-of-Frame Intra-chr q23.1 Transcription factor q23.1 Seq+ 1598 ChimerSeq FusionScan TCGA_RNA-Seq LONP1-SAFB2 LONP1 chr19 5705782 - SAFB2 chr19 5604947 - Exonic hg19 BRCA TCGA-AR-A251 2 Out-of-Frame Intra-chr p13.3 p13.3 Tumor suppressor gene Transcription factor Seq+ 1599 ChimerSeq FusionScan TCGA_RNA-Seq SQSTM1-CRAT SQSTM1 chr5 179238682 + CRAT chr9 131866585 - Exonic hg19 BRCA TCGA-BH-A1ET 2 5'UTR-CDS Inter-chr q35.3 q34.11 1600 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-BH-A1ET 2 5'UTR-5'UTR Inter-chr p13.2 p22 1601 ChimerSeq FusionScan TCGA_RNA-Seq FLJ31306-PPM1A FLJ31306 chr14 58764672 - PPM1A chr14 60752341 + Exonic hg19 BRCA TCGA-BH-A1ET 2 3'UTR-CDS Intra-chr q23.1 Tumor suppressor gene 1602 ChimerSeq FusionScan TCGA_RNA-Seq INPP4B-ARHGEF26 INPP4B chr4 143324090 - ARHGEF26 chr3 153935657 + Exonic hg19 BRCA TCGA-C8-A12O 2 In-Frame Inter-chr q31.21 Tumor suppressor gene 1603 ChimerSeq FusionScan TCGA_RNA-Seq MAP3K7-DCTN4 MAP3K7 chr6 91256976 - DCTN4 chr5 150110302 - Exonic hg19 BRCA TCGA-B6-A401 2 In-Frame Inter-chr q15 STE:STE11 Oncogene q33.1 1604 ChimerSeq FusionScan TCGA_RNA-Seq UBE2Z-UTP18 UBE2Z chr17 47000299 + UTP18 chr17 49371263 + Exonic hg19 BRCA TCGA-EW-A6SC 4 In-Frame Intra-chr q21.32 q21.33 Seq+ 1605 ChimerSeq FusionScan TCGA_RNA-Seq FCHSD2-SHANK2 FCHSD2 chr11 72632872 - SHANK2 chr11 70319544 - Exonic hg19 BRCA TCGA-EW-A6SC 3 Out-of-Frame Intra-chr q13.4 q13.4 Seq+ 1606 ChimerSeq FusionScan TCGA_RNA-Seq CLMN-EVL CLMN chr14 95786047 - EVL chr14 100551023 + Exonic hg19 BRCA TCGA-EW-A6SC 2 Out-of-Frame Intra-chr q32.13 q32.2 Seq+ 1607 ChimerSeq FusionScan TCGA_RNA-Seq BCL2L11-AFMID BCL2L11 chr2 111881716 + AFMID chr17 76187050 + Exonic hg19 BRCA TCGA-BH-A18Q 2 Out-of-Frame Inter-chr q13 Tumor suppressor gene q25.3 Seq+ 1608 ChimerSeq FusionScan TCGA_RNA-Seq CCBP2-ZNF662 CCBP2 chr3 42851024 + ZNF662 chr3 42950287 + Exonic hg19 BRCA TCGA-BH-A0B3 2 5'UTR-CDS Intra-chr p22.1 Transcription factor 1609 ChimerSeq FusionScan TCGA_RNA-Seq LHFPL2-KCNIP1 LHFPL2 chr5 77860635 - KCNIP1 chr5 170145761 + Exonic hg19 BRCA TCGA-BH-A0B3 2 5'UTR-CDS Intra-chr q14.1 q35.1 Seq+ 1610 ChimerSeq FusionScan TCGA_RNA-Seq HSF1-ADAMTS12 HSF1 chr8 145515556 + ADAMTS12 chr5 33596165 - Exonic hg19 BRCA TCGA-BH-A0B3 2 Out-of-Frame Inter-chr q24.3 Transcription factor p13.2 Seq+ 1611 ChimerSeq FusionScan TCGA_RNA-Seq PDGFA-NT5C3 PDGFA chr7 550445 - NT5C3 chr7 33063720 - Exonic hg19 BRCA TCGA-A2-A0YE 9 In-Frame Intra-chr p22.3 Seq+ 1612 ChimerSeq FusionScan TCGA_RNA-Seq SDF2-RPTOR SDF2 chr17 26988743 - RPTOR chr17 78599490 + Exonic hg19 BRCA TCGA-A2-A0YE 2 Out-of-Frame Intra-chr q11.2 q25.3 Seq+ 1613 ChimerSeq FusionScan TCGA_RNA-Seq KLHL26-KXD1 KLHL26 chr19 18775253 + KXD1 chr19 18679211 + Exonic hg19 BRCA TCGA-A2-A0YE 2 Out-of-Frame Intra-chr p13.11 p13.11 Seq+ 1614 ChimerSeq FusionScan TCGA_RNA-Seq HS2ST1-PRDX1 HS2ST1 chr1 87380843 + PRDX1 chr1 45984726 - Exonic hg19 BRCA TCGA-A2-A0YE 2 CDS-5'UTR Intra-chr p22.3 p34.1 Seq+ 1615 ChimerSeq FusionScan TCGA_RNA-Seq ATF7-CLUAP1 ATF7 chr12 53994736 - CLUAP1 chr16 3554719 + Exonic hg19 BRCA TCGA-A7-A3J1 2 Out-of-Frame Inter-chr q13.13 Transcription factor p13.3 1616 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD12-MTHFD2L ANKRD12 chr18 9221997 + MTHFD2L chr4 75091018 + Exonic hg19 BRCA TCGA-A2-A4S3 3 In-Frame Inter-chr p11.22 q13.3 Seq+ 1617 ChimerSeq FusionScan TCGA_RNA-Seq FAM111B-MS4A5 FAM111B chr11 58877179 + MS4A5 chr11 60198268 + Exonic hg19 BRCA TCGA-B6-A0IG 8 In-Frame Intra-chr q12.1 q12.2 Seq+ 1618 ChimerSeq FusionScan TCGA_RNA-Seq PRRG4-RAPGEFL1 PRRG4 chr11 32852178 + RAPGEFL1 chr17 38345117 + Exonic hg19 BRCA TCGA-B6-A0IG 5 Out-of-Frame Inter-chr p13 q21.1 Seq+ 1619 ChimerSeq FusionScan TCGA_RNA-Seq ERC1-PIK3C2G ERC1 chr12 1299218 + PIK3C2G chr12 18641382 + Exonic hg19 BRCA TCGA-B6-A0IG 4 In-Frame Intra-chr p12.3 Seq+ 1620 ChimerSeq FusionScan TCGA_RNA-Seq EZH1-TOP2A EZH1 chr17 40854894 - TOP2A chr17 38561135 - Exonic hg19 BRCA TCGA-B6-A0IG 2 Out-of-Frame Intra-chr q21.2 Tumor suppressor gene q21.2 Seq+ 1621 ChimerSeq FusionScan TCGA_RNA-Seq GYS1-EML2 GYS1 chr19 49485511 - EML2 chr19 46116929 - Exonic hg19 BRCA TCGA-BH-A1F6 8 Out-of-Frame Intra-chr q13.33 q13.32 Seq+ 1622 ChimerSeq FusionScan TCGA_RNA-Seq BPTF-PITPNC1 BPTF chr17 65936772 + PITPNC1 chr17 65665623 + Exonic hg19 BRCA TCGA-BH-A1F6 5 In-Frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 1623 ChimerSeq FusionScan TCGA_RNA-Seq SPTBN4-C19orf47 SPTBN4 chr19 41026058 + C19orf47 chr19 40842314 - Exonic hg19 BRCA TCGA-BH-A1F6 4 Out-of-Frame Intra-chr q13.2 q13.2 Seq+ 1624 ChimerSeq FusionScan TCGA_RNA-Seq AURKB-MYH10 AURKB chr17 8113847 - MYH10 chr17 8452105 - Exonic hg19 BRCA TCGA-BH-A1F6 3 5'UTR-CDS Intra-chr p13.1 Oncogene p13.1 Seq+ 1625 ChimerSeq FusionScan TCGA_RNA-Seq PUM1-PTPRK PUM1 chr1 31479840 - PTPRK chr6 128643455 - Exonic hg19 BRCA TCGA-BH-A1F6 2 In-Frame Inter-chr p35.2 Tumor suppressor gene Seq+ 1626 ChimerSeq FusionScan TCGA_RNA-Seq GYS1-EML2 GYS1 chr19 49488717 - EML2 chr19 46116929 - Exonic hg19 BRCA TCGA-BH-A1F6 2 In-Frame Intra-chr q13.33 q13.32 Seq+ 1627 ChimerSeq FusionScan TCGA_RNA-Seq PUM1-PTPRK PUM1 chr1 31478699 - PTPRK chr6 128643455 - Exonic hg19 BRCA TCGA-BH-A1F6 2 Out-of-Frame Inter-chr p35.2 Tumor suppressor gene Seq+ 1628 ChimerSeq FusionScan TCGA_RNA-Seq PELI1-APLF PELI1 chr2 64371214 - APLF chr2 68794472 + Exonic hg19 BRCA TCGA-BH-A1F6 2 5'UTR-CDS Intra-chr p14 p13.3 Seq+ 1629 ChimerSeq FusionScan TCGA_RNA-Seq SDCCAG8-C1orf101 SDCCAG8 chr1 243581378 + C1orf101 chr1 244715623 + Exonic hg19 BRCA TCGA-BH-A1F6 2 In-Frame Intra-chr Seq+ 1630 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-A2-A25A 3 5'UTR-5'UTR Inter-chr p13.2 p22 1631 ChimerSeq FusionScan TCGA_RNA-Seq SNAP29-IGLL1 SNAP29 chr22 21224821 + IGLL1 chr22 23917269 - Exonic hg19 BRCA TCGA-PE-A5DE 5 In-Frame Intra-chr q11.21 q11.23 Seq+ 1632 ChimerSeq FusionScan TCGA_RNA-Seq CDC27-ST7L CDC27 chr17 45266511 - ST7L chr1 113143470 - Exonic hg19 BRCA TCGA-A1-A0SH 3 Out-of-Frame Inter-chr q21.32 p13.2 Seq+ 1633 ChimerSeq FusionScan TCGA_RNA-Seq EXOC7-USP22 EXOC7 chr17 74097351 - USP22 chr17 20911309 - Exonic hg19 BRCA TCGA-EW-A2FS 2 Out-of-Frame Intra-chr q25.1 p11.2 Seq+ 1634 ChimerSeq FusionScan TCGA_RNA-Seq THSD4-LRRC49 THSD4 chr15 71447271 + LRRC49 chr15 71272439 + Exonic hg19 BRCA TCGA-EW-A2FS 2 In-Frame Intra-chr q23 q23 Seq+ 1635 ChimerSeq FusionScan TCGA_RNA-Seq TOP1-PTPRT TOP1 chr20 39658095 + PTPRT chr20 40911165 - Exonic hg19 BRCA TCGA-E2-A15F 4 Out-of-Frame Intra-chr q12 Oncogene q13.11 Oncogene Tumor suppressor gene Seq+ 1636 ChimerSeq FusionScan TCGA_RNA-Seq PTPRT-NCOA3 PTPRT chr20 40944362 - NCOA3 chr20 46211926 + Exonic hg19 BRCA TCGA-E2-A15F 3 CDS-5'UTR Intra-chr q13.11 Oncogene Tumor suppressor gene q13.12 Transcription factor Seq+ 1637 ChimerSeq FusionScan TCGA_RNA-Seq SUPT5H-SIPA1L3 SUPT5H chr19 39936605 + SIPA1L3 chr19 38643479 + Exonic hg19 BRCA TCGA-E9-A1RF 7 Out-of-Frame Intra-chr q13.2 q13.13 Seq+ 1638 ChimerSeq FusionScan TCGA_RNA-Seq RWDD1-WASF1 RWDD1 chr6 116892818 + WASF1 chr6 110448832 - Exonic hg19 BRCA TCGA-E9-A1RF 5 5'UTR-5'UTR Intra-chr q22.1 q21 Seq+ 1639 ChimerSeq FusionScan TCGA_RNA-Seq SPAG9-FAM117A SPAG9 chr17 49197714 - FAM117A chr17 47797798 - Exonic hg19 BRCA TCGA-E9-A1RF 5 In-Frame Intra-chr q21.33 q21.33 Seq+ 1640 ChimerSeq FusionScan TCGA_RNA-Seq OSTM1-CEP85L OSTM1 chr6 108395453 - CEP85L chr6 118953774 - Exonic hg19 BRCA TCGA-E9-A1RF 3 Out-of-Frame Intra-chr q21 q22.31 Seq+ 1641 ChimerSeq FusionScan TCGA_RNA-Seq SRCIN1-FNDC8 SRCIN1 chr17 36717698 - FNDC8 chr17 33454060 + Exonic hg19 BRCA TCGA-E9-A1RF 2 In-Frame Intra-chr q12 q12 Seq+ 1642 ChimerSeq FusionScan TCGA_RNA-Seq MICAL1-AKD1 MICAL1 chr6 109771172 - AKD1 chr6 109819168 - Exonic hg19 BRCA TCGA-E9-A1RF 2 Out-of-Frame Intra-chr q21 Seq+ 1643 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF7-TMCO3 ARHGEF7 chr13 111806338 + TMCO3 chr13 114174930 + Exonic hg19 BRCA TCGA-BH-A42V 2 Out-of-Frame Intra-chr q34 q34 1644 ChimerSeq FusionScan TCGA_RNA-Seq RPL36-MFSD12 RPL36 chr19 5690338 + MFSD12 chr19 3544937 - Exonic hg19 BRCA TCGA-C8-A12L 6 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 1645 ChimerSeq FusionScan TCGA_RNA-Seq ALCAM-EIF2A ALCAM chr3 105086325 + EIF2A chr3 150270142 + Exonic hg19 BRCA TCGA-C8-A12L 5 In-Frame Intra-chr q13.11 q25.1 Seq+ 1646 ChimerSeq FusionScan TCGA_RNA-Seq RYBP-TADA3 RYBP chr3 72495646 - TADA3 chr3 9833177 - Exonic hg19 BRCA TCGA-C8-A12L 4 CDS-5'UTR Intra-chr p25.3 Seq+ 1647 ChimerSeq FusionScan TCGA_RNA-Seq PRKDC-DEFB103A PRKDC chr8 48761714 - DEFB103A chr8 7739944 + Exonic hg19 BRCA TCGA-C8-A12L 4 In-Frame Intra-chr q11.21 Oncogene p23.1 1648 ChimerSeq FusionScan TCGA_RNA-Seq PTRH2-DHX40 PTRH2 chr17 57784731 - DHX40 chr17 57676097 + Exonic hg19 BRCA TCGA-C8-A12L 3 5'UTR-CDS Intra-chr q23.1 q23.1 1649 ChimerSeq FusionScan TCGA_RNA-Seq LONP1-MAP2K7 LONP1 chr19 5719714 - MAP2K7 chr19 7974639 + Exonic hg19 BRCA TCGA-C8-A12L 2 Out-of-Frame Intra-chr p13.3 p13.2 STE:STE7 Seq+ 1650 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1109-GPR125 KIAA1109 chr4 123260563 + GPR125 chr4 22394313 - Exonic hg19 BRCA TCGA-C8-A12L 2 Out-of-Frame Intra-chr q27 Seq+ 1651 ChimerSeq FusionScan TCGA_RNA-Seq IGF2R-PCDH17 IGF2R chr6 160390427 + PCDH17 chr13 58240601 + Exonic hg19 BRCA TCGA-C8-A12L 2 Out-of-Frame Inter-chr q25.3 Oncogene Tumor suppressor gene q21.1 Tumor suppressor gene Seq+ 1652 ChimerSeq FusionScan TCGA_RNA-Seq RB1-LINC00441 RB1 chr13 48881542 + LINC00441 chr13 48871266 - Exonic hg19 BRCA TCGA-AR-A24H 2 CDS-3'UTR Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Seq+ 1653 ChimerSeq FusionScan TCGA_RNA-Seq ANXA7-MALSU1 ANXA7 chr10 75173769 - MALSU1 chr7 23340457 + Exonic hg19 BRCA TCGA-AR-A24H 2 5'UTR-CDS Inter-chr q22.2 Tumor suppressor gene p15.3 Seq+ 1654 ChimerSeq FusionScan TCGA_RNA-Seq ASXL2-HSPH1 ASXL2 chr2 26101034 - HSPH1 chr13 31733000 - Exonic hg19 BRCA TCGA-AR-A24H 2 Out-of-Frame Inter-chr p23.3 q12.3 Seq+ 1655 ChimerSeq FusionScan TCGA_RNA-Seq IP6K2-PRKAR2A IP6K2 chr3 48754589 - PRKAR2A chr3 48802782 - Exonic hg19 BRCA TCGA-A1-A0SK 7 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 1656 ChimerSeq FusionScan TCGA_RNA-Seq KDM5A-ANO2 KDM5A chr12 427271 - ANO2 chr12 5708795 - Exonic hg19 BRCA TCGA-A1-A0SK 7 In-Frame Intra-chr p13.33 Tumor suppressor gene p13.31 Seq+ 1657 ChimerSeq FusionScan TCGA_RNA-Seq SRF-F5 SRF chr6 43141851 + F5 chr1 169483697 - Exonic hg19 BRCA TCGA-A1-A0SK 3 In-Frame Inter-chr p21.1 Transcription factor q24.2 Seq+ 1658 ChimerSeq FusionScan TCGA_RNA-Seq PIK3C2G-PPFIBP1 PIK3C2G chr12 18552781 + PPFIBP1 chr12 27826699 + Exonic hg19 BRCA TCGA-A1-A0SK 2 In-Frame Intra-chr p12.3 p11.23 Seq+ 1659 ChimerSeq FusionScan TCGA_RNA-Seq RBFOX2-MYH9 RBFOX2 chr22 36424287 - MYH9 chr22 36712714 - Exonic hg19 BRCA TCGA-E2-A14R 3 In-Frame Intra-chr q12.3 Oncogene Tumor suppressor gene Seq+ 1660 ChimerSeq FusionScan TCGA_RNA-Seq TOP1-PZP TOP1 chr20 39690130 + PZP chr12 9356547 - Exonic hg19 BRCA TCGA-E2-A14R 2 In-Frame Inter-chr q12 Oncogene p13.31 Seq+ 1661 ChimerSeq FusionScan TCGA_RNA-Seq EPRS-DNAH14 EPRS chr1 220160483 - DNAH14 chr1 225506284 + Exonic hg19 BRCA TCGA-A7-A26I 3 Out-of-Frame Intra-chr q41 q42.12 Seq+ 1662 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R12B-EIF2AK4 PPP1R12B chr1 202318270 + EIF2AK4 chr15 40282473 + Exonic hg19 BRCA TCGA-A7-A26I 2 In-Frame Inter-chr q32.1 q15.1 1663 ChimerSeq FusionScan TCGA_RNA-Seq CLPTM1-CYP2A13 CLPTM1 chr19 45488561 + CYP2A13 chr19 41595951 + Exonic hg19 BRCA TCGA-A7-A26I 2 Out-of-Frame Intra-chr q13.32 q13.2 1664 ChimerSeq FusionScan TCGA_RNA-Seq PTPRA-VPS16 PTPRA chr20 2854406 + VPS16 chr20 2840364 + Exonic hg19 BRCA TCGA-A7-A26I 2 5'UTR-CDS Intra-chr p13 p13 Seq+ 1665 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BRCA TCGA-A7-A26I 2 Out-of-Frame Intra-chr q22.2 q22.2 1666 ChimerSeq FusionScan TCGA_RNA-Seq FOXK2-MADCAM1 FOXK2 chr17 80478183 + MADCAM1 chr19 501668 + Exonic hg19 BRCA TCGA-B6-A3ZX 2 Out-of-Frame Inter-chr q25.3 Transcription factor p13.3 Seq+ 1667 ChimerSeq FusionScan TCGA_RNA-Seq EPS15L1-MED26 EPS15L1 chr19 16503114 - MED26 chr19 16689220 - Exonic hg19 BRCA TCGA-B6-A3ZX 2 In-Frame Intra-chr p13.11 p13.11 Seq+ 1668 ChimerSeq FusionScan TCGA_RNA-Seq PMPCB-DNAJC2 PMPCB chr7 102950922 + DNAJC2 chr7 102963241 - Exonic hg19 BRCA TCGA-B6-A3ZX 2 In-Frame Intra-chr q22.1 q22.1 1669 ChimerSeq FusionScan TCGA_RNA-Seq PADI4-AKR7A3 PADI4 chr1 17657644 + AKR7A3 chr1 19612866 - Exonic hg19 BRCA TCGA-B6-A3ZX 2 Out-of-Frame Intra-chr p36.13 Seq+ 1670 ChimerSeq FusionScan TCGA_RNA-Seq RPS11-RUVBL2 RPS11 chr19 50001303 + RUVBL2 chr19 49517740 + Exonic hg19 BRCA TCGA-B6-A3ZX 2 5'UTR-CDS Intra-chr q13.33 q13.33 1671 ChimerSeq FusionScan TCGA_RNA-Seq EPRS-DNAH14 EPRS chr1 220160483 - DNAH14 chr1 225506284 + Exonic hg19 BRCA TCGA-A7-A26I 3 Out-of-Frame Intra-chr q41 q42.12 Seq+ 1672 ChimerSeq FusionScan TCGA_RNA-Seq ANAPC16-MICU1 ANAPC16 chr10 73975830 + MICU1 chr10 74237014 - Exonic hg19 BRCA TCGA-A8-A06Q 2 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 1673 ChimerSeq FusionScan TCGA_RNA-Seq SETDB2-ERH SETDB2 chr13 50042096 + ERH chr14 69847357 - Exonic hg19 BRCA TCGA-BH-A0EE 6 In-Frame Inter-chr q14.2 Transcription factor q24.1 Seq+ 1674 ChimerSeq FusionScan TCGA_RNA-Seq KPNA3-FLJ22447 KPNA3 chr13 50366573 - FLJ22447 chr14 62117679 + Exonic hg19 BRCA TCGA-BH-A0EE 5 CDS-5'UTR Inter-chr q14.2 q23.1 Seq+ 1675 ChimerSeq FusionScan TCGA_RNA-Seq CATSPERB-TRIP11 CATSPERB chr14 92126180 - TRIP11 chr14 92439205 - Exonic hg19 BRCA TCGA-BH-A0EE 3 Out-of-Frame Intra-chr q32.12 Oncogene Seq+ 1676 ChimerSeq FusionScan TCGA_RNA-Seq DOPEY2-TRPM2 DOPEY2 chr21 37537169 + TRPM2 chr21 45825024 + Exonic hg19 BRCA TCGA-BH-A0EE 3 In-Frame Intra-chr q22.12 q22.3 Tumor suppressor gene Seq+ 1677 ChimerSeq FusionScan TCGA_RNA-Seq TC2N-TRIP11 TC2N chr14 92302526 - TRIP11 chr14 92460256 - Exonic hg19 BRCA TCGA-BH-A0EE 2 5'UTR-CDS Intra-chr q32.12 Oncogene Seq+ 1678 ChimerSeq FusionScan TCGA_RNA-Seq TC2N-TRIP11 TC2N chr14 92302714 - TRIP11 chr14 92460256 - Exonic hg19 BRCA TCGA-BH-A0EE 2 5'UTR-CDS Intra-chr q32.12 Oncogene Seq+ 1679 ChimerSeq FusionScan TCGA_RNA-Seq GTF2I-BCAP29 GTF2I chr7 74125440 + BCAP29 chr7 107253776 + Exonic hg19 BRCA TCGA-BH-A0EE 2 In-Frame Intra-chr q11.23 Transcription factor 1680 ChimerSeq FusionScan TCGA_RNA-Seq SETDB2-ERH SETDB2 chr13 50038192 + ERH chr14 69847357 - Exonic hg19 BRCA TCGA-BH-A0EE 2 Out-of-Frame Inter-chr q14.2 Transcription factor q24.1 Seq+ 1681 ChimerSeq FusionScan TCGA_RNA-Seq DGCR2-PPPDE2 DGCR2 chr22 19028570 - PPPDE2 chr22 42003865 - Exonic hg19 BRCA TCGA-BH-A0EE 2 In-Frame Intra-chr q11.21 Seq+ 1682 ChimerSeq FusionScan TCGA_RNA-Seq AKAP8L-BRD4 AKAP8L chr19 15529721 - BRD4 chr19 15383944 - Exonic hg19 BRCA TCGA-C8-A27B 3 CDS-5'UTR Intra-chr p13.12 Transcription factor p13.12 Atypical:BRD Seq+ 1683 ChimerSeq FusionScan TCGA_RNA-Seq PSMD3-C11orf80 PSMD3 chr17 38137443 + C11orf80 chr11 66526513 + Exonic hg19 BRCA TCGA-A1-A0SN 4 In-Frame Inter-chr q21.1 q13.2 Seq+ 1684 ChimerSeq FusionScan TCGA_RNA-Seq CADPS2-LMOD2 CADPS2 chr7 122526052 - LMOD2 chr7 123301913 + Exonic hg19 BRCA TCGA-A1-A0SN 3 In-Frame Intra-chr q31.32 q31.32 Seq+ 1685 ChimerSeq FusionScan TCGA_RNA-Seq DDX42-RPS6KB1 DDX42 chr17 61882535 + RPS6KB1 chr17 57987922 + Exonic hg19 BRCA TCGA-A1-A0SN 3 In-Frame Intra-chr q23.3 q23.1 Oncogene Seq+ 1686 ChimerSeq FusionScan TCGA_RNA-Seq USP6-CLTC USP6 chr17 5052062 + CLTC chr17 57728563 + Exonic hg19 BRCA TCGA-A1-A0SN 3 In-Frame Intra-chr p13.2 q23.1 Seq+ 1687 ChimerSeq FusionScan TCGA_RNA-Seq TANC2-STRADA TANC2 chr17 61086987 + STRADA chr17 61805773 - Exonic hg19 BRCA TCGA-A1-A0SN 2 CDS-5'UTR Intra-chr q23.2 q23.3 Tumor suppressor gene Seq+ 1688 ChimerSeq FusionScan TCGA_RNA-Seq RHOD-PFDN4 RHOD chr11 66824505 + PFDN4 chr20 52830889 + Exonic hg19 BRCA TCGA-A1-A0SN 2 In-Frame Inter-chr q13.2 q13.2 Seq+ 1689 ChimerSeq FusionScan TCGA_RNA-Seq KDM2A-MAP3K3 KDM2A chr11 66999431 + MAP3K3 chr17 61759125 + Exonic hg19 BRCA TCGA-A1-A0SN 2 Out-of-Frame Inter-chr q13.2 Transcription factor q23.3 STE:STE11 Seq+ 1690 ChimerSeq FusionScan TCGA_RNA-Seq SETD3-C12orf23 SETD3 chr14 99924615 - C12orf23 chr12 107360888 + Exonic hg19 BRCA TCGA-A1-A0SN 2 CDS-5'UTR Inter-chr q32.2 1691 ChimerSeq FusionScan TCGA_RNA-Seq TLK2-KCNJ16 TLK2 chr17 60558567 + KCNJ16 chr17 68096798 + Exonic hg19 BRCA TCGA-A1-A0SN 2 CDS-5'UTR Intra-chr q23.2 Other:TLK q24.3 Seq+ 1692 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB1-TEX2 RPS6KB1 chr17 57990165 + TEX2 chr17 62291602 - Exonic hg19 BRCA TCGA-A1-A0SN 2 CDS-5'UTR Intra-chr q23.1 Oncogene q23.3 Seq+ 1693 ChimerSeq FusionScan TCGA_RNA-Seq FAM82A2-SKA2 FAM82A2 chr15 41043623 - SKA2 chr17 57189706 - Exonic hg19 BRCA TCGA-C8-A1HI 4 In-Frame Inter-chr q22 1694 ChimerSeq FusionScan TCGA_RNA-Seq IGF1R-TRIP4 IGF1R chr15 99486281 + TRIP4 chr15 64737204 + Exonic hg19 BRCA TCGA-C8-A1HI 3 Out-of-Frame Intra-chr q26.3 TK:InsR Oncogene q22.31 Seq+ 1695 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BRCA TCGA-A2-A3XS 2 Out-of-Frame Intra-chr q22.2 q22.2 1696 ChimerSeq FusionScan TCGA_RNA-Seq ATP8B1-NARS ATP8B1 chr18 55398858 - NARS chr18 55278939 - Exonic hg19 BRCA TCGA-AO-A03O 4 In-Frame Intra-chr q21.31 q21.31 Seq+ 1697 ChimerSeq FusionScan TCGA_RNA-Seq CCDC57-TMEM120B CCDC57 chr17 80170660 - TMEM120B chr12 122181534 + Exonic hg19 BRCA TCGA-AO-A03O 2 5'UTR-CDS Inter-chr q25.3 q24.31 1698 ChimerSeq FusionScan TCGA_RNA-Seq IL13RA1-SLC25A5 IL13RA1 chrX 117875119 + SLC25A5 chrX 118604335 + Exonic hg19 BRCA TCGA-AO-A03O 2 Out-of-Frame Intra-chr q24 q24 1699 ChimerSeq FusionScan TCGA_RNA-Seq FCHSD2-SHANK2 FCHSD2 chr11 72851075 - SHANK2 chr11 70338570 - Exonic hg19 BRCA TCGA-B6-A0RL 4 Out-of-Frame Intra-chr q13.4 q13.4 Seq+ 1700 ChimerSeq FusionScan TCGA_RNA-Seq TPCN2-RAB11FIP1 TPCN2 chr11 68831435 + RAB11FIP1 chr8 37720631 - Exonic hg19 BRCA TCGA-B6-A0RL 2 In-Frame Inter-chr q13.3 p11.23 Seq+ 1701 ChimerSeq FusionScan TCGA_RNA-Seq ZNF37A-PIP5K1B ZNF37A chr10 38385560 + PIP5K1B chr9 71433376 + Exonic hg19 BRCA TCGA-AR-A2LL 6 CDS-5'UTR Inter-chr p11.1 Transcription factor q21.11 Seq+ 1702 ChimerSeq FusionScan TCGA_RNA-Seq ZNF37A-PIP5K1B ZNF37A chr10 38385560 + PIP5K1B chr9 71357416 + Exonic hg19 BRCA TCGA-AR-A2LL 5 CDS-5'UTR Inter-chr p11.1 Transcription factor q21.11 Seq+ 1703 ChimerSeq FusionScan TCGA_RNA-Seq SLC25A24-DHRS12 SLC25A24 chr1 108724562 - DHRS12 chr13 52373803 - Exonic hg19 BRCA TCGA-AR-A2LL 2 CDS-5'UTR Inter-chr q14.3 Seq+ 1704 ChimerSeq FusionScan TCGA_RNA-Seq PIK3R2-MEF2B PIK3R2 chr19 18264104 + MEF2B chr19 19261573 - Exonic hg19 BRCA TCGA-A2-A1G0 3 5'UTR-5'UTR Intra-chr p13.11 Oncogene p13.11 Transcription factor 1705 ChimerSeq FusionScan TCGA_RNA-Seq EFNA3-PIK3C2G EFNA3 chr1 155057880 + PIK3C2G chr12 18499574 + Exonic hg19 BRCA TCGA-EW-A1PC 3 In-Frame Inter-chr q21.3 p12.3 Seq+ 1706 ChimerSeq FusionScan TCGA_RNA-Seq TOX3-ITFG1 TOX3 chr16 52479905 - ITFG1 chr16 47196575 - Exonic hg19 BRCA TCGA-AR-A24K 3 Out-of-Frame Intra-chr q12.1 q12.1 Seq+ 1707 ChimerSeq FusionScan TCGA_RNA-Seq B3GALTL-STK33 B3GALTL chr13 31789237 + STK33 chr11 8496613 - Exonic hg19 BRCA TCGA-AR-A24K 2 CDS-5'UTR Inter-chr p15.4 CAMK:CAMK-Unique Seq+ 1708 ChimerSeq FusionScan TCGA_RNA-Seq CLPB-MTUS2 CLPB chr11 72069923 - MTUS2 chr13 29674909 + Exonic hg19 BRCA TCGA-AR-A24K 2 In-Frame Inter-chr q13.4 q12.3 Seq+ 1709 ChimerSeq FusionScan TCGA_RNA-Seq ZNF346-PAOX ZNF346 chr5 176449914 + PAOX chr10 135202459 + Exonic hg19 BRCA TCGA-A2-A0ST 2 In-Frame Inter-chr q35.2 Transcription factor q26.3 Seq+ 1710 ChimerSeq FusionScan TCGA_RNA-Seq NAP1L1-STK38L NAP1L1 chr12 76478346 - STK38L chr12 27450642 + Exonic hg19 BRCA TCGA-BH-A1FN 5 5'UTR-5'UTR Intra-chr q21.2 p11.23 Seq+ 1711 ChimerSeq FusionScan TCGA_RNA-Seq LRRN2-KCNMA1 LRRN2 chr1 204654447 - KCNMA1 chr10 78839308 - Exonic hg19 BRCA TCGA-BH-A1FN 2 5'UTR-CDS Inter-chr q32.1 q22.3 1712 ChimerSeq FusionScan TCGA_RNA-Seq ACBD6-PGBD2 ACBD6 chr1 180366650 - PGBD2 chr1 249208014 + Exonic hg19 BRCA TCGA-AC-A3QQ 2 CDS-5'UTR Intra-chr q25.3 q44 Seq+ 1713 ChimerSeq FusionScan TCGA_RNA-Seq DSCR3-TTC3 DSCR3 chr21 38639538 - TTC3 chr21 38480691 + Exonic hg19 BRCA TCGA-AC-A3QQ 2 Out-of-Frame Intra-chr q22.13 q22.13 Seq+ 1714 ChimerSeq FusionScan TCGA_RNA-Seq STARD3NL-KLHL7 STARD3NL chr7 38218022 + KLHL7 chr7 23180387 + Exonic hg19 BRCA TCGA-AC-A3QQ 2 5'UTR-5'UTR Intra-chr p14.1 p15.3 1715 ChimerSeq FusionScan TCGA_RNA-Seq AK3-KIAA2026 AK3 chr9 4740936 - KIAA2026 chr9 5954095 - Exonic hg19 BRCA TCGA-AC-A3QQ 2 In-Frame Intra-chr p24.1 p24.1 1716 ChimerSeq FusionScan TCGA_RNA-Seq MRPL21-SSH3 MRPL21 chr11 68663982 - SSH3 chr11 67074308 + Exonic hg19 BRCA TCGA-E2-A15O 5 In-Frame Intra-chr q13.3 q13.2 Seq+ 1717 ChimerSeq FusionScan TCGA_RNA-Seq SNX30-DENND1A SNX30 chr9 115580095 + DENND1A chr9 126220176 - Exonic hg19 BRCA TCGA-E2-A15M 3 In-Frame Intra-chr q32 q33.3 Seq+ 1718 ChimerSeq FusionScan TCGA_RNA-Seq ESR1-PHF14 ESR1 chr6 152023140 + PHF14 chr7 11150976 + Exonic hg19 BRCA TCGA-E2-A15M 2 5'UTR-5'UTR Inter-chr q25.1 Oncogene Tumor suppressor gene Transcription factor p21.3 1719 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-E2-A15M 2 5'UTR-5'UTR Inter-chr p13.2 p22 1720 ChimerSeq FusionScan TCGA_RNA-Seq YTHDC2-PRKAA1 YTHDC2 chr5 112903546 + PRKAA1 chr5 40771965 - Exonic hg19 BRCA TCGA-E2-A15M 2 Out-of-Frame Intra-chr q22.2 p13.1 Tumor suppressor gene 1721 ChimerSeq FusionScan TCGA_RNA-Seq LINC00152-ANAPC1 LINC00152 chr2 87755164 + ANAPC1 chr2 112566758 - Exonic hg19 BRCA TCGA-E2-A15M 2 5'UTR-CDS Intra-chr q13 Tumor suppressor gene 1722 ChimerSeq FusionScan TCGA_RNA-Seq MATR3-SIL1 MATR3 chr5 138629494 + SIL1 chr5 138463542 - Exonic hg19 BRCA TCGA-C8-A130 2 5'UTR-5'UTR Intra-chr q31.2 q31.2 1723 ChimerSeq FusionScan TCGA_RNA-Seq ATP2A2-RRP1 ATP2A2 chr12 110781239 + RRP1 chr21 45211230 + Exonic hg19 BRCA TCGA-B6-A0RH 3 In-Frame Inter-chr q24.11 q22.3 Seq+ 1724 ChimerSeq FusionScan TCGA_RNA-Seq ATG4B-THAP4 ATG4B chr2 242577139 + THAP4 chr2 242545888 - Exonic hg19 BRCA TCGA-B6-A0RH 2 In-Frame Intra-chr q37.3 q37.3 Transcription factor 1725 ChimerSeq FusionScan TCGA_RNA-Seq SPAG5-BLMH SPAG5 chr17 26925527 - BLMH chr17 28576186 - Exonic hg19 BRCA TCGA-A2-A25B 6 Out-of-Frame Intra-chr q11.2 q11.2 Seq+ 1726 ChimerSeq FusionScan TCGA_RNA-Seq FLOT2-PEX12 FLOT2 chr17 27215962 - PEX12 chr17 33904610 - Exonic hg19 BRCA TCGA-A2-A25B 5 Out-of-Frame Intra-chr q11.2 q12 Seq+ 1727 ChimerSeq FusionScan TCGA_RNA-Seq MAST4-NLN MAST4 chr5 66449408 + NLN chr5 65118608 + Exonic hg19 BRCA TCGA-A2-A25B 4 In-Frame Intra-chr q12.3 AGC:MAST q12.3 Seq+ 1728 ChimerSeq FusionScan TCGA_RNA-Seq RCC2-PADI4 RCC2 chr1 17755601 - PADI4 chr1 17681027 + Exonic hg19 BRCA TCGA-A2-A25B 4 Out-of-Frame Intra-chr Seq+ 1729 ChimerSeq FusionScan TCGA_RNA-Seq DDX42-BRIP1 DDX42 chr17 61884014 + BRIP1 chr17 59886118 - Exonic hg19 BRCA TCGA-A2-A25B 3 In-Frame Intra-chr q23.3 q23.2 Oncogene Seq+ 1730 ChimerSeq FusionScan TCGA_RNA-Seq PITPNC1-BPTF PITPNC1 chr17 65574373 + BPTF chr17 65914829 + Exonic hg19 BRCA TCGA-A2-A25B 3 Out-of-Frame Intra-chr q24.2 q24.2 Transcription factor Seq+ 1731 ChimerSeq FusionScan TCGA_RNA-Seq RABEP1-ASPA RABEP1 chr17 5185815 + ASPA chr17 3397643 + Exonic hg19 BRCA TCGA-A2-A25B 2 In-Frame Intra-chr p13.2 p13.2 Seq+ 1732 ChimerSeq FusionScan TCGA_RNA-Seq CCNK-MRPS22 CCNK chr14 99967208 + MRPS22 chr3 139071488 + Exonic hg19 BRCA TCGA-A2-A25B 2 Out-of-Frame Inter-chr q32.2 q23 1733 ChimerSeq FusionScan TCGA_RNA-Seq RPL5-FASN RPL5 chr1 93297674 + FASN chr17 80053348 - Exonic hg19 BRCA TCGA-A2-A25B 2 Out-of-Frame Inter-chr p22.1 Tumor suppressor gene q25.3 1734 ChimerSeq FusionScan TCGA_RNA-Seq LRRFIP1-CXCR7 LRRFIP1 chr2 238536383 + CXCR7 chr2 237489082 + Exonic hg19 BRCA TCGA-BH-A42U 2 CDS-5'UTR Intra-chr q37.3 1735 ChimerSeq FusionScan TCGA_RNA-Seq UPF3A-C8orf40 UPF3A chr13 115052104 + C8orf40 chr8 42401611 + Exonic hg19 BRCA TCGA-BH-A42U 2 CDS-5'UTR Inter-chr q34 1736 ChimerSeq FusionScan TCGA_RNA-Seq ZNF425-AGAP3 ZNF425 chr7 148809228 - AGAP3 chr7 150813879 + Exonic hg19 BRCA TCGA-BH-A42U 2 In-Frame Intra-chr q36.1 Transcription factor q36.1 1737 ChimerSeq FusionScan TCGA_RNA-Seq PICK1-POLR2F PICK1 chr22 38453857 + POLR2F chr22 38352779 + Exonic hg19 BRCA TCGA-B6-A0IJ 4 In-Frame Intra-chr q13.1 q13.1 Seq+ 1738 ChimerSeq FusionScan TCGA_RNA-Seq MTA1-PACS2 MTA1 chr14 105886400 + PACS2 chr14 105814829 + Exonic hg19 BRCA TCGA-B6-A0IJ 2 Out-of-Frame Intra-chr q32.33 q32.33 Seq+ 1739 ChimerSeq FusionScan TCGA_RNA-Seq ATG5-RSPH10B ATG5 chr6 106696024 - RSPH10B chr7 6831534 + Exonic hg19 BRCA TCGA-AR-A0TW 3 In-Frame Inter-chr q21 p22.1 Seq+ 1740 ChimerSeq FusionScan TCGA_RNA-Seq WDR70-PLCXD3 WDR70 chr5 37516692 + PLCXD3 chr5 41313872 - Exonic hg19 BRCA TCGA-AR-A0TW 2 In-Frame Intra-chr p13.2 p13.1 Seq+ 1741 ChimerSeq FusionScan TCGA_RNA-Seq ADAMTS17-LRRC28 ADAMTS17 chr15 100589061 - LRRC28 chr15 99901540 + Exonic hg19 BRCA TCGA-A2-A4RW 2 In-Frame Intra-chr q26.3 q26.3 Seq+ 1742 ChimerSeq FusionScan TCGA_RNA-Seq EIF4G3-PPP2R3A EIF4G3 chr1 21503214 - PPP2R3A chr3 135806724 + Exonic hg19 BRCA TCGA-E2-A158 2 5'UTR-CDS Inter-chr p36.12 q22.2 Seq+ 1743 ChimerSeq FusionScan TCGA_RNA-Seq UBAC2-CLYBL UBAC2 chr13 99890808 + CLYBL chr13 100543571 + Exonic hg19 BRCA TCGA-D8-A1JK 8 In-Frame Intra-chr q32.3 q32.3 Seq+ 1744 ChimerSeq FusionScan TCGA_RNA-Seq ZNF292-CGA ZNF292 chr6 87865477 + CGA chr6 87797925 - Exonic hg19 BRCA TCGA-D8-A1JK 6 CDS-5'UTR Intra-chr q14.3 Tumor suppressor gene Transcription factor q14.3 Seq+ 1745 ChimerSeq FusionScan TCGA_RNA-Seq TM2D2-MSI2 TM2D2 chr8 38852836 - MSI2 chr17 55478739 + Exonic hg19 BRCA TCGA-D8-A1JK 3 In-Frame Inter-chr p11.22 q22 Seq+ 1746 ChimerSeq FusionScan TCGA_RNA-Seq KLC1-MARK3 KLC1 chr14 104136620 + MARK3 chr14 103915255 + Exonic hg19 BRCA TCGA-D8-A1JK 2 In-Frame Intra-chr q32.33 q32.32 CAMK:CAMKL Seq+ 1747 ChimerSeq FusionScan TCGA_RNA-Seq C10orf46-EIF3A C10orf46 chr10 120488806 - EIF3A chr10 120818909 - Exonic hg19 BRCA TCGA-D8-A1JK 2 In-Frame Intra-chr q26.11 Seq+ 1748 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BRCA TCGA-D8-A1JK 2 Out-of-Frame Intra-chr q22.2 q22.2 1749 ChimerSeq FusionScan TCGA_RNA-Seq RGPD1-NBEA RGPD1 chr2 87185059 + NBEA chr13 36158034 + Exonic hg19 BRCA TCGA-D8-A27R 5 In-Frame Inter-chr p11.2 q13.3 1750 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC7-ASTN2 ZCCHC7 chr9 37126939 + ASTN2 chr9 119626012 - Exonic hg19 BRCA TCGA-D8-A27R 3 Out-of-Frame Intra-chr p13.2 q33.1 Seq+ 1751 ChimerSeq FusionScan TCGA_RNA-Seq LUC7L2-JAKMIP1 LUC7L2 chr7 139045068 + JAKMIP1 chr4 6114724 - Exonic hg19 BRCA TCGA-D8-A27R 3 CDS-5'UTR Inter-chr q34 p16.1 Seq+ 1752 ChimerSeq FusionScan TCGA_RNA-Seq TRIM32-MELK TRIM32 chr9 119449660 + MELK chr9 36607571 + Exonic hg19 BRCA TCGA-D8-A27R 2 5'UTR-5'UTR Intra-chr q33.1 Tumor suppressor gene p13.2 CAMK:CAMKL Seq+ 1753 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0930-ANK3 KIAA0930 chr22 45636520 - ANK3 chr10 61898845 - Exonic hg19 BRCA TCGA-EW-A1OZ 2 In-Frame Inter-chr q13.31 q21.2 Seq+ 1754 ChimerSeq FusionScan TCGA_RNA-Seq RBPMS-RILPL1 RBPMS chr8 30242674 + RILPL1 chr12 123970352 - Exonic hg19 BRCA TCGA-D8-A1JM 8 In-Frame Inter-chr p12 q24.31 Seq+ 1755 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R13B-C14orf2 PPP1R13B chr14 104313635 - C14orf2 chr14 104381526 - Exonic hg19 BRCA TCGA-D8-A1JM 5 In-Frame Intra-chr q32.33 q32.33 Seq+ 1756 ChimerSeq FusionScan TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105495489 - OBFC1 chr10 105648902 - Exonic hg19 BRCA TCGA-D8-A1JM 3 In-Frame Intra-chr q24.33 Seq+ 1757 ChimerSeq FusionScan TCGA_RNA-Seq AKR7A3-CAPZB AKR7A3 chr1 19610489 - CAPZB chr1 19746244 - Exonic hg19 BRCA TCGA-D8-A1JM 2 In-Frame Intra-chr p36.13 p36.13 1758 ChimerSeq FusionScan TCGA_RNA-Seq AKR7L-CAPZB AKR7L chr1 19595065 - CAPZB chr1 19746244 - Exonic hg19 BRCA TCGA-D8-A1JM 2 3'UTR-3'UTR Intra-chr p36.13 p36.13 1759 ChimerSeq FusionScan TCGA_RNA-Seq ST14-BARX2 ST14 chr11 130029955 + BARX2 chr11 129306645 + Exonic hg19 BRCA TCGA-D8-A1JM 2 Out-of-Frame Intra-chr q24.3 q24.3 Transcription factor Seq+ 1760 ChimerSeq FusionScan TCGA_RNA-Seq FANCD2-MTMR14 FANCD2 chr3 10074656 + MTMR14 chr3 9719000 + Exonic hg19 BRCA TCGA-D8-A1JM 2 In-Frame Intra-chr p25.3 Oncogene p25.3 Seq+ 1761 ChimerSeq FusionScan TCGA_RNA-Seq PGAP3-STAC2 PGAP3 chr17 37844086 - STAC2 chr17 37373426 - Exonic hg19 BRCA TCGA-A8-A08X 11 In-Frame Intra-chr q12 Oncogene q12 Seq+ 1762 ChimerSeq FusionScan TCGA_RNA-Seq FAM129B-OLFM1 FAM129B chr9 130331098 - OLFM1 chr9 137982040 + Exonic hg19 BRCA TCGA-A8-A08X 6 Out-of-Frame Intra-chr q34.11 q34.3 Seq+ 1763 ChimerSeq FusionScan TCGA_RNA-Seq MAPKAP1-VAV2 MAPKAP1 chr9 128419929 - VAV2 chr9 136726554 - Exonic hg19 BRCA TCGA-A8-A08X 5 In-Frame Intra-chr q33.3 q34.2 Seq+ 1764 ChimerSeq FusionScan TCGA_RNA-Seq FAM129B-SEC16A FAM129B chr9 130331098 - SEC16A chr9 139342613 - Exonic hg19 BRCA TCGA-A8-A08X 4 Out-of-Frame Intra-chr q34.11 q34.3 Seq+ 1765 ChimerSeq FusionScan TCGA_RNA-Seq SLFN11-MIEN1 SLFN11 chr17 33700492 - MIEN1 chr17 37886544 - Exonic hg19 BRCA TCGA-A8-A08X 3 5'UTR-CDS Intra-chr q12 q12 Seq+ 1766 ChimerSeq FusionScan TCGA_RNA-Seq SEPT2-KANSL1L SEPT2 chr2 242255397 + KANSL1L chr2 211019335 - Exonic hg19 BRCA TCGA-A8-A08X 2 5'UTR-5'UTR Intra-chr q37.3 q34 1767 ChimerSeq FusionScan TCGA_RNA-Seq CDK12-ERBB2 CDK12 chr17 37657692 + ERBB2 chr17 37851240 + Exonic hg19 BRCA TCGA-A8-A08X 2 CDS-5'UTR Intra-chr q12 Oncogene q12 Oncogene Seq+ 1768 ChimerSeq FusionScan TCGA_RNA-Seq NACC2-NUP214 NACC2 chr9 138941481 - NUP214 chr9 134108840 + Exonic hg19 BRCA TCGA-A8-A08X 2 Out-of-Frame Intra-chr q34.3 Transcription factor q34.13 Oncogene Seq+ 1769 ChimerSeq FusionScan TCGA_RNA-Seq CAMSAP1-NACC2 CAMSAP1 chr9 138798845 - NACC2 chr9 138908275 - Exonic hg19 BRCA TCGA-A8-A08X 2 In-Frame Intra-chr q34.3 q34.3 Transcription factor 1770 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-A2-A0SY 3 5'UTR-5'UTR Inter-chr p13.2 p22 1771 ChimerSeq FusionScan TCGA_RNA-Seq ARFGEF2-CNIH2 ARFGEF2 chr20 47558524 + CNIH2 chr11 66049729 + Exonic hg19 BRCA TCGA-BH-A0H6 4 In-Frame Inter-chr q13.13 q13.2 Seq+ 1772 ChimerSeq FusionScan TCGA_RNA-Seq CNPY2-LIMCH1 CNPY2 chr12 56708634 - LIMCH1 chr4 41496552 + Exonic hg19 BRCA TCGA-A2-A0T6 2 In-Frame Inter-chr q13.3 p13 1773 ChimerSeq FusionScan TCGA_RNA-Seq ZEB1-KIAA1462 ZEB1 chr10 31608221 + KIAA1462 chr10 30318795 - Exonic hg19 BRCA TCGA-A2-A0T6 2 Out-of-Frame Intra-chr p11.22 Transcription factor p11.23 1774 ChimerSeq FusionScan TCGA_RNA-Seq KDM4B-C19orf44 KDM4B chr19 5016350 + C19orf44 chr19 16611602 + Exonic hg19 BRCA TCGA-A7-A13E 3 5'UTR-5'UTR Intra-chr p13.3 p13.11 Seq+ 1775 ChimerSeq FusionScan TCGA_RNA-Seq ZC3H3-YY1 ZC3H3 chr8 144557567 - YY1 chr14 100728640 + Exonic hg19 BRCA TCGA-A8-A09N 2 In-Frame Inter-chr q32.2 Transcription factor Seq+ 1776 ChimerSeq FusionScan TCGA_RNA-Seq WHSC2-POLN WHSC2 chr4 2010476 - POLN chr4 2210214 - Exonic hg19 BRCA TCGA-A8-A09N 2 In-Frame Intra-chr p16.3 1777 ChimerSeq FusionScan TCGA_RNA-Seq PRRC2B-NUP214 PRRC2B chr9 134340465 + NUP214 chr9 134050846 + Exonic hg19 BRCA TCGA-A8-A09N 2 In-Frame Intra-chr q34.13 q34.13 Oncogene Seq+ 1778 ChimerSeq FusionScan TCGA_RNA-Seq NTN4-GNAI3 NTN4 chr12 96184032 - GNAI3 chr1 110116358 + Exonic hg19 BRCA TCGA-A8-A09Z 2 In-Frame Inter-chr q22 p13.3 1779 ChimerSeq FusionScan TCGA_RNA-Seq CD58-MAN1A2 CD58 chr1 117113524 - MAN1A2 chr1 117944807 + Exonic hg19 BRCA TCGA-E2-A1LS 2 Out-of-Frame Intra-chr p13.1 p12 1780 ChimerSeq FusionScan TCGA_RNA-Seq PRR15L-AARSD1 PRR15L chr17 46035022 - AARSD1 chr17 41103911 - Exonic hg19 BRCA TCGA-B6-A40C 2 5'UTR-CDS Intra-chr q21.32 q21.31 1781 ChimerSeq FusionScan TCGA_RNA-Seq UBR5-SSTR5 UBR5 chr8 103424400 - SSTR5 chr16 1128841 + Exonic hg19 BRCA TCGA-D8-A27L 3 CDS-5'UTR Inter-chr q22.3 Oncogene p13.3 Seq+ 1782 ChimerSeq FusionScan TCGA_RNA-Seq ERAP2-FAM81B ERAP2 chr5 96212231 + FAM81B chr5 94772503 + Exonic hg19 BRCA TCGA-AR-A24U 3 5'UTR-CDS Intra-chr q15 q15 Seq+ 1783 ChimerSeq FusionScan TCGA_RNA-Seq TEX2-TOB1 TEX2 chr17 62340527 - TOB1 chr17 48941524 - Exonic hg19 BRCA TCGA-AR-A24U 2 5'UTR-5'UTR Intra-chr q23.3 q21.33 Seq+ 1784 ChimerSeq FusionScan TCGA_RNA-Seq QKI-PACRG QKI chr6 163899928 + PACRG chr6 163483181 + Exonic hg19 BRCA TCGA-E9-A1ND 3 In-Frame Intra-chr q26 q26 Tumor suppressor gene Seq+ 1785 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0232-HNRNPD KIAA0232 chr4 6843931 + HNRNPD chr4 83280792 - Exonic hg19 BRCA TCGA-E9-A1ND 2 Out-of-Frame Intra-chr p16.1 q21.22 1786 ChimerSeq FusionScan TCGA_RNA-Seq RNF145-RBM15 RNF145 chr5 158621723 - RBM15 chr1 110888929 + Exonic hg19 BRCA TCGA-E9-A1ND 2 Out-of-Frame Inter-chr q33.3 p13.3 1787 ChimerSeq FusionScan TCGA_RNA-Seq JAK2-INSL4 JAK2 chr9 5126446 + INSL4 chr9 5233653 + Exonic hg19 BRCA TCGA-E9-A1ND 2 Out-of-Frame Intra-chr p24.1 TK:JakA Oncogene p24.1 Seq+ 1788 ChimerSeq FusionScan TCGA_RNA-Seq PPP6R3-SSH2 PPP6R3 chr11 68321725 + SSH2 chr17 28030080 - Exonic hg19 BRCA TCGA-C8-A1HK 4 In-Frame Inter-chr q13.2 q11.2 Seq+ 1789 ChimerSeq FusionScan TCGA_RNA-Seq MYO18A-LRRC37B MYO18A chr17 27413455 - LRRC37B chr17 30357674 + Exonic hg19 BRCA TCGA-C8-A1HK 2 In-Frame Intra-chr q11.2 Oncogene q11.2 1790 ChimerSeq FusionScan TCGA_RNA-Seq ANO1-ABHD15 ANO1 chr11 70028792 + ABHD15 chr17 27890104 - Exonic hg19 BRCA TCGA-C8-A1HK 2 In-Frame Inter-chr q13.3 q11.2 Seq+ 1791 ChimerSeq FusionScan TCGA_RNA-Seq VGLL4-SYNPR VGLL4 chr3 11744444 - SYNPR chr3 63542218 + Exonic hg19 BRCA TCGA-AR-A0TS 7 Out-of-Frame Intra-chr p25.2 p14.2 Seq+ 1792 ChimerSeq FusionScan TCGA_RNA-Seq DSN1-SOGA1 DSN1 chr20 35383165 - SOGA1 chr20 35415040 - Exonic hg19 BRCA TCGA-AR-A0TS 3 Out-of-Frame Intra-chr q11.23 q11.23 Seq+ 1793 ChimerSeq FusionScan TCGA_RNA-Seq KLHDC3-PPP2R5D KLHDC3 chr6 42987104 + PPP2R5D chr6 42978205 + Exonic hg19 BRCA TCGA-AR-A0TS 2 In-Frame Intra-chr p21.1 p21.1 1794 ChimerSeq FusionScan TCGA_RNA-Seq FOXO3-PPP1R9A FOXO3 chr6 108883032 + PPP1R9A chr7 94876784 + Exonic hg19 BRCA TCGA-AR-A0TS 2 In-Frame Inter-chr q21 Oncogene Tumor suppressor gene Transcription factor q21.3 Seq+ 1795 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175394270 - Exonic hg19 BRCA TCGA-AR-A0TS 2 5'UTR-CDS Inter-chr q21.1 q35.2 1796 ChimerSeq FusionScan TCGA_RNA-Seq USP13-KIAA1804 USP13 chr3 179371181 + KIAA1804 chr1 233518050 + Exonic hg19 BRCA TCGA-AR-A0TS 2 Out-of-Frame Inter-chr q26.33 Seq+ 1797 ChimerSeq FusionScan TCGA_RNA-Seq ITGB6-BAZ2B ITGB6 chr2 160964189 - BAZ2B chr2 160335232 - Exonic hg19 BRCA TCGA-C8-A26W 8 CDS-5'UTR Intra-chr q24.2 q24.2 Transcription factor Seq+ 1798 ChimerSeq FusionScan TCGA_RNA-Seq NACC1-DOCK6 NACC1 chr19 13229268 + DOCK6 chr19 11344042 - Exonic hg19 BRCA TCGA-C8-A26W 4 5'UTR-CDS Intra-chr p13.13 p13.2 Seq+ 1799 ChimerSeq FusionScan TCGA_RNA-Seq ZNF551-CDKAL1 ZNF551 chr19 58193612 + CDKAL1 chr6 20649523 + Exonic hg19 BRCA TCGA-C8-A26W 2 Out-of-Frame Inter-chr q13.43 Transcription factor p22.3 1800 ChimerSeq FusionScan TCGA_RNA-Seq IPO11-TNFAIP8 IPO11 chr5 61770291 + TNFAIP8 chr5 118728510 + Exonic hg19 BRCA TCGA-A8-A08L 6 In-Frame Intra-chr q12.1 q23.1 Seq+ 1801 ChimerSeq FusionScan TCGA_RNA-Seq CTBP2-ADAM12 CTBP2 chr10 126799558 - ADAM12 chr10 128019078 - Exonic hg19 BRCA TCGA-A8-A08L 5 5'UTR-CDS Intra-chr q26.13 q26.2 Seq+ 1802 ChimerSeq FusionScan TCGA_RNA-Seq AGPAT3-NAALADL2 AGPAT3 chr21 45323900 + NAALADL2 chr3 175520792 + Exonic hg19 BRCA TCGA-AN-A0XN 2 5'UTR-CDS Inter-chr q22.3 q26.31 Seq+ 1803 ChimerSeq FusionScan TCGA_RNA-Seq LTBP1-CDH23 LTBP1 chr2 33447218 + CDH23 chr10 73269838 + Exonic hg19 BRCA TCGA-AN-A0XN 2 In-Frame Inter-chr p22.3 q22.1 Seq+ 1804 ChimerSeq FusionScan TCGA_RNA-Seq SIPA1L3-LSM14A SIPA1L3 chr19 38519796 + LSM14A chr19 34706028 + Exonic hg19 BRCA TCGA-AN-A0XN 2 5'UTR-CDS Intra-chr q13.13 Seq+ 1805 ChimerSeq FusionScan TCGA_RNA-Seq NHP2L1-PPPDE2 NHP2L1 chr22 42076247 - PPPDE2 chr22 42003865 - Exonic hg19 BRCA TCGA-E9-A22G 8 In-Frame Intra-chr 1806 ChimerSeq FusionScan TCGA_RNA-Seq SORL1-TECTA SORL1 chr11 121403261 + TECTA chr11 121058540 + Exonic hg19 BRCA TCGA-E9-A22G 7 In-Frame Intra-chr q24.1 q23.3 Seq+ 1807 ChimerSeq FusionScan TCGA_RNA-Seq LDLRAD3-CD44 LDLRAD3 chr11 35965694 + CD44 chr11 35198121 + Exonic hg19 BRCA TCGA-E9-A22G 4 In-Frame Intra-chr p13 p13 Oncogene Tumor suppressor gene Seq+ 1808 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BRCA TCGA-E9-A22G 2 Out-of-Frame Intra-chr q22.2 q22.2 1809 ChimerSeq FusionScan TCGA_RNA-Seq ANXA2-RNF114 ANXA2 chr15 60643391 - RNF114 chr20 48565784 + Exonic hg19 BRCA TCGA-C8-A12P 10 In-Frame Inter-chr q22.2 q13.13 Seq+ 1810 ChimerSeq FusionScan TCGA_RNA-Seq ERC1-TOMM34 ERC1 chr12 1517413 + TOMM34 chr20 43572220 - Exonic hg19 BRCA TCGA-C8-A12P 5 Out-of-Frame Inter-chr q13.12 Seq+ 1811 ChimerSeq FusionScan TCGA_RNA-Seq WIPF2-IKZF3 WIPF2 chr17 38421398 + IKZF3 chr17 37949186 - Exonic hg19 BRCA TCGA-C8-A12P 4 In-Frame Intra-chr q21.2 q21.1 Tumor suppressor gene Transcription factor Seq+ 1812 ChimerSeq FusionScan TCGA_RNA-Seq MAPK6-USO1 MAPK6 chr15 52311573 + USO1 chr4 76731584 + Exonic hg19 BRCA TCGA-C8-A12P 3 5'UTR-CDS Inter-chr q21.2 q21.1 Seq+ 1813 ChimerSeq FusionScan TCGA_RNA-Seq NR2F2-MSI2 NR2F2 chr15 96869581 + MSI2 chr17 55607036 + Exonic hg19 BRCA TCGA-C8-A12P 3 Out-of-Frame Inter-chr q26.2 Transcription factor q22 Seq+ 1814 ChimerSeq FusionScan TCGA_RNA-Seq ZMIZ1-SFTPD ZMIZ1 chr10 80829027 + SFTPD chr10 81706418 - Exonic hg19 BRCA TCGA-C8-A12P 2 5'UTR-5'UTR Intra-chr q22.3 q22.3 1815 ChimerSeq FusionScan TCGA_RNA-Seq PSMD12-PRKCA PSMD12 chr17 65340721 - PRKCA chr17 64492318 + Exonic hg19 BRCA TCGA-C8-A12P 2 Out-of-Frame Intra-chr q24.2 q24.2 Seq+ 1816 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-AC-A6NO 2 5'UTR-5'UTR Inter-chr p13.2 p22 1817 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BRCA TCGA-LL-A7T0 2 Out-of-Frame Intra-chr q22.2 q22.2 1818 ChimerSeq FusionScan TCGA_RNA-Seq PTBP2-KAZN PTBP2 chr1 97189150 + KAZN chr1 15361244 + Exonic hg19 BRCA TCGA-BH-A1FC 6 Out-of-Frame Intra-chr p21.3 p36.21 Seq+ 1819 ChimerSeq FusionScan TCGA_RNA-Seq RNF11-TMEM61 RNF11 chr1 51702551 + TMEM61 chr1 55457508 + Exonic hg19 BRCA TCGA-BH-A1FC 5 Out-of-Frame Intra-chr p32.3 p32.3 Seq+ 1820 ChimerSeq FusionScan TCGA_RNA-Seq FAF1-NFIA FAF1 chr1 51425438 - NFIA chr1 61818121 + Exonic hg19 BRCA TCGA-BH-A1FC 4 Out-of-Frame Intra-chr p32.3 p31.3 Transcription factor Seq+ 1821 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1-IDUA WHSC1 chr4 1873269 + IDUA chr4 981596 + Exonic hg19 BRCA TCGA-BH-A1FC 2 5'UTR-CDS Intra-chr Oncogene p16.3 Seq+ 1822 ChimerSeq FusionScan TCGA_RNA-Seq EXOSC8-NDUFS1 EXOSC8 chr13 37574959 + NDUFS1 chr2 206997829 - Exonic hg19 BRCA TCGA-C8-A1HE 2 Out-of-Frame Inter-chr q13.3 1823 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-AR-A24M 2 5'UTR-5'UTR Inter-chr p13.2 p22 1824 ChimerSeq FusionScan TCGA_RNA-Seq PLAC8-RPL9 PLAC8 chr4 84035818 - RPL9 chr4 39458158 - Exonic hg19 BRCA TCGA-E9-A5FK 2 5'UTR-CDS Intra-chr q21.22 p14 1825 ChimerSeq FusionScan TCGA_RNA-Seq FTX-PDXK FTX chrX 73513186 - PDXK chr21 45153949 + Exonic hg19 BRCA TCGA-A2-A4RY 2 3'UTR-CDS Inter-chr q13.2 q22.3 1826 ChimerSeq FusionScan TCGA_RNA-Seq EIF2C2-TRAPPC9 EIF2C2 chr8 141645583 - TRAPPC9 chr8 141381279 - Exonic hg19 BRCA TCGA-D8-A1JP 2 Out-of-Frame Intra-chr q24.3 1827 ChimerSeq FusionScan TCGA_RNA-Seq FAM82B-AKAP6 FAM82B chr8 87487048 - AKAP6 chr14 33299053 + Exonic hg19 BRCA TCGA-E9-A22A 4 CDS-3'UTR Inter-chr q12 Seq+ 1828 ChimerSeq FusionScan TCGA_RNA-Seq SPATA6-MAD2L2 SPATA6 chr1 48917223 - MAD2L2 chr1 11737005 - Exonic hg19 BRCA TCGA-E9-A22A 2 Out-of-Frame Intra-chr p33 p36.22 Seq+ 1829 ChimerSeq FusionScan TCGA_RNA-Seq CLU-PBK CLU chr8 27472171 - PBK chr8 27690650 - Exonic hg19 BRCA TCGA-E9-A22A 2 5'UTR-5'UTR Intra-chr p21.1 Tumor suppressor gene p21.1 Other:TOPK Seq+ 1830 ChimerSeq FusionScan TCGA_RNA-Seq SLFN5-SYNRG SLFN5 chr17 33570162 + SYNRG chr17 35914161 - Exonic hg19 BRCA TCGA-A8-A07I 3 5'UTR-CDS Intra-chr q12 1831 ChimerSeq FusionScan TCGA_RNA-Seq SCD-GPR19 SCD chr10 102108103 + GPR19 chr12 12815404 - Exonic hg19 BRCA TCGA-A8-A07I 3 CDS-5'UTR Inter-chr q24.31 p13.1 Seq+ 1832 ChimerSeq FusionScan TCGA_RNA-Seq ACSF2-SPAG9 ACSF2 chr17 48503750 + SPAG9 chr17 49091714 - Exonic hg19 BRCA TCGA-A8-A07I 2 In-Frame Intra-chr q21.33 q21.33 Seq+ 1833 ChimerSeq FusionScan TCGA_RNA-Seq LASP1-ARHGAP23 LASP1 chr17 37026511 + ARHGAP23 chr17 36614345 + Exonic hg19 BRCA TCGA-A8-A07I 2 In-Frame Intra-chr q12 q12 Seq+ 1834 ChimerSeq FusionScan TCGA_RNA-Seq ARRDC1-EHMT1 ARRDC1 chr9 140500287 + EHMT1 chr9 140605418 + Exonic hg19 BRCA TCGA-A8-A07I 2 Out-of-Frame Intra-chr q34.3 q34.3 Seq+ 1835 ChimerSeq FusionScan TCGA_RNA-Seq CDK8-IKZF3 CDK8 chr13 26828906 + IKZF3 chr17 37988404 - Exonic hg19 BRCA TCGA-A8-A07I 2 Out-of-Frame Inter-chr q12.13 CMGC:CDK Oncogene q21.1 Tumor suppressor gene Transcription factor Seq+ 1836 ChimerSeq FusionScan TCGA_RNA-Seq PRR19-PPP1R37 PRR19 chr19 42806655 + PPP1R37 chr19 45641771 + Exonic hg19 BRCA TCGA-BH-A0H0 2 5'UTR-CDS Intra-chr q13.2 q13.32 Seq+ 1837 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP29-PPAP2A ARHGAP29 chr1 94702970 - PPAP2A chr5 54737736 - Exonic hg19 BRCA TCGA-BH-A0DS 2 5'UTR-CDS Inter-chr p22.1 Tumor suppressor gene 1838 ChimerSeq FusionScan TCGA_RNA-Seq PTPRK-C6orf203 PTPRK chr6 128841403 - C6orf203 chr6 107365463 + Exonic hg19 BRCA TCGA-BH-A1F0 4 Out-of-Frame Intra-chr Tumor suppressor gene q21 Seq+ 1839 ChimerSeq FusionScan TCGA_RNA-Seq ABHD14B-POC1A ABHD14B chr3 52007980 - POC1A chr3 52110001 - Exonic hg19 BRCA TCGA-BH-A1F0 3 Out-of-Frame Intra-chr p21.2 p21.2 Seq+ 1840 ChimerSeq FusionScan TCGA_RNA-Seq PTPRF-GUCA2A PTPRF chr1 44019612 + GUCA2A chr1 42629281 - Exonic hg19 BRCA TCGA-BH-A1F0 3 Out-of-Frame Intra-chr p34.2 p34.2 Seq+ 1841 ChimerSeq FusionScan TCGA_RNA-Seq USP4-RHOA USP4 chr3 49372901 - RHOA chr3 49400059 - Exonic hg19 BRCA TCGA-BH-A1F0 2 In-Frame Intra-chr p21.31 p21.31 Oncogene Tumor suppressor gene Seq+ 1842 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB20-MBD2 ZBTB20 chr3 114693212 - MBD2 chr18 51731527 - Exonic hg19 BRCA TCGA-BH-A1F0 2 5'UTR-CDS Inter-chr q13.31 Transcription factor q21.2 Transcription factor 1843 ChimerSeq FusionScan TCGA_RNA-Seq C6orf170-HBS1L C6orf170 chr6 121600266 - HBS1L chr6 135315013 - Exonic hg19 BRCA TCGA-BH-A1F0 2 In-Frame Intra-chr q23.3 Seq+ 1844 ChimerSeq FusionScan TCGA_RNA-Seq NRCAM-PRIM2 NRCAM chr7 107830088 - PRIM2 chr6 57512471 + Exonic hg19 BRCA TCGA-A8-A06R 6 Out-of-Frame Inter-chr q31.1 Tumor suppressor gene p11.2 Seq+ 1845 ChimerSeq FusionScan TCGA_RNA-Seq AOAH-STAMBPL1 AOAH chr7 36616179 - STAMBPL1 chr10 90661412 + Exonic hg19 BRCA TCGA-A8-A06R 2 CDS-5'UTR Inter-chr p14.2 q23.31 1846 ChimerSeq FusionScan TCGA_RNA-Seq PEG10-COL1A2 PEG10 chr7 94285892 + COL1A2 chr7 94029507 + Exonic hg19 BRCA TCGA-A8-A09R 4 5'UTR-CDS Intra-chr q21.3 q21.3 Seq+ 1847 ChimerSeq FusionScan TCGA_RNA-Seq PCBP2-EEA1 PCBP2 chr12 53865591 + EEA1 chr12 93258763 - Exonic hg19 BRCA TCGA-A8-A076 4 Out-of-Frame Intra-chr q13.13 q22 Transcription factor Seq+ 1848 ChimerSeq FusionScan TCGA_RNA-Seq TANC2-FBXL20 TANC2 chr17 61086987 + FBXL20 chr17 37459892 - Exonic hg19 BRCA TCGA-A8-A076 3 Out-of-Frame Intra-chr q23.2 q12 Seq+ 1849 ChimerSeq FusionScan TCGA_RNA-Seq ZFP91-RAB6A ZFP91 chr11 58352357 + RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-A8-A076 2 Out-of-Frame Intra-chr q12.1 Transcription factor q13.4 Seq+ 1850 ChimerSeq FusionScan TCGA_RNA-Seq FBXL20-TANC2 FBXL20 chr17 37499432 - TANC2 chr17 61086897 + Exonic hg19 BRCA TCGA-A8-A076 2 CDS-5'UTR Intra-chr q12 q23.2 Seq+ 1851 ChimerSeq FusionScan TCGA_RNA-Seq SYTL2-CHRM1 SYTL2 chr11 85411557 - CHRM1 chr11 62678650 - Exonic hg19 BRCA TCGA-BH-A201 3 CDS-5'UTR Intra-chr q14.1 q12.3 Seq+ 1852 ChimerSeq FusionScan TCGA_RNA-Seq LMAN1-TXNL1 LMAN1 chr18 57020433 - TXNL1 chr18 54270287 - Exonic hg19 BRCA TCGA-BH-A201 2 In-Frame Intra-chr q21.32 q21.31 1853 ChimerSeq FusionScan TCGA_RNA-Seq FCHSD2-RNF169 FCHSD2 chr11 72613587 - RNF169 chr11 74500670 + Exonic hg19 BRCA TCGA-BH-A201 2 Out-of-Frame Intra-chr q13.4 q13.4 Seq+ 1854 ChimerSeq FusionScan TCGA_RNA-Seq TMEM136-POU2F3 TMEM136 chr11 120198349 + POU2F3 chr11 120139918 + Exonic hg19 BRCA TCGA-C8-A12U 2 In-Frame Intra-chr q23.3 q23.3 Tumor suppressor gene Transcription factor Seq+ 1855 ChimerSeq FusionScan TCGA_RNA-Seq EXOC2-SH3RF3 EXOC2 chr6 693018 - SH3RF3 chr2 109964129 + Exonic hg19 BRCA TCGA-C8-A12U 2 5'UTR-CDS Inter-chr p25.3 q13 Seq+ 1856 ChimerSeq FusionScan TCGA_RNA-Seq HSD17B7-NPHP1 HSD17B7 chr1 162762652 + NPHP1 chr2 110927575 - Exonic hg19 BRCA TCGA-C8-A12U 2 In-Frame Inter-chr q23.3 q13 Seq+ 1857 ChimerSeq FusionScan TCGA_RNA-Seq ZMYND8-GTPBP1 ZMYND8 chr20 45848908 - GTPBP1 chr22 39111911 + Exonic hg19 BRCA TCGA-EW-A1PF 6 In-Frame Inter-chr q13.12 q13.1 Seq+ 1858 ChimerSeq FusionScan TCGA_RNA-Seq NCOA6-RALGAPA2 NCOA6 chr20 33334610 - RALGAPA2 chr20 20570009 - Exonic hg19 BRCA TCGA-EW-A1PF 2 In-Frame Intra-chr q11.22 p11.23 Seq+ 1859 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0825-FAM172A KIAA0825 chr5 93720072 - FAM172A chr5 93410474 - Exonic hg19 BRCA TCGA-B6-A0RG 2 CDS-5'UTR Intra-chr q15 q15 Tumor suppressor gene 1860 ChimerSeq FusionScan TCGA_RNA-Seq ESR1-ASPH ESR1 chr6 152201906 + ASPH chr8 62416068 - Exonic hg19 BRCA TCGA-A2-A3KD 8 Out-of-Frame Inter-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q12.3 Seq+ 1861 ChimerSeq FusionScan TCGA_RNA-Seq SLC25A32-C8orf56 SLC25A32 chr8 104427011 - C8orf56 chr8 104145597 - Exonic hg19 BRCA TCGA-B6-A0RU 2 CDS-3'UTR Intra-chr q22.3 Seq+ 1862 ChimerSeq FusionScan TCGA_RNA-Seq TCF12-TEX9 TCF12 chr15 57213296 + TEX9 chr15 56665638 + Exonic hg19 BRCA TCGA-A2-A04T 3 Out-of-Frame Intra-chr q21.3 Oncogene Transcription factor q21.3 Seq+ 1863 ChimerSeq FusionScan TCGA_RNA-Seq FAM129B-PYROXD1 FAM129B chr9 130331098 - PYROXD1 chr12 21593301 + Exonic hg19 BRCA TCGA-A2-A04T 2 Out-of-Frame Inter-chr q34.11 p12.1 Seq+ 1864 ChimerSeq FusionScan TCGA_RNA-Seq ATF7-ATP5G2 ATF7 chr12 53994736 - ATP5G2 chr12 54063732 - Exonic hg19 BRCA TCGA-OL-A66P 6 In-Frame Intra-chr q13.13 Transcription factor q13.13 Seq+ 1865 ChimerSeq FusionScan TCGA_RNA-Seq PCBP2-SP1 PCBP2 chr12 53861077 + SP1 chr12 53800368 + Exonic hg19 BRCA TCGA-OL-A66P 2 In-Frame Intra-chr q13.13 q13.13 Transcription factor Seq+ 1866 ChimerSeq FusionScan TCGA_RNA-Seq CALCOCO2-ARSG CALCOCO2 chr17 46908440 + ARSG chr17 66416329 + Exonic hg19 BRCA TCGA-C8-A1HO 7 5'UTR-CDS Intra-chr q21.32 q24.2 Seq+ 1867 ChimerSeq FusionScan TCGA_RNA-Seq GPR158-MYO16 GPR158 chr10 25465251 + MYO16 chr13 109644723 + Exonic hg19 BRCA TCGA-C8-A1HO 5 In-Frame Inter-chr p12.1 Seq+ 1868 ChimerSeq FusionScan TCGA_RNA-Seq FGFR1-TACC1 FGFR1 chr8 38275745 - TACC1 chr8 38646221 + Exonic hg19 BRCA TCGA-C8-A1HO 3 In-Frame Intra-chr p11.23 TK:FGFR Oncogene p11.22 KB Pub Seq+ 1869 ChimerSeq FusionScan TCGA_RNA-Seq AXIN2-LRRC37A3 AXIN2 chr17 63537572 - LRRC37A3 chr17 62852007 - Exonic hg19 BRCA TCGA-C8-A1HO 2 In-Frame Intra-chr q24.1 Tumor suppressor gene q24.1 Seq+ 1870 ChimerSeq FusionScan TCGA_RNA-Seq GRB2-TEX14 GRB2 chr17 73401569 - TEX14 chr17 56707915 - Exonic hg19 BRCA TCGA-C8-A1HO 2 5'UTR-CDS Intra-chr q25.1 q22 Seq+ 1871 ChimerSeq FusionScan TCGA_RNA-Seq WIPF2-IL2RB WIPF2 chr17 38375744 + IL2RB chr22 37540245 - Exonic hg19 BRCA TCGA-C8-A132 23 5'UTR-5'UTR Inter-chr q21.2 q12.3 Seq+ 1872 ChimerSeq FusionScan TCGA_RNA-Seq EME1-LRRC59 EME1 chr17 48453554 + LRRC59 chr17 48460596 - Exonic hg19 BRCA TCGA-C8-A132 4 Out-of-Frame Intra-chr q21.33 q21.33 Seq+ 1873 ChimerSeq FusionScan TCGA_RNA-Seq TCTA-ARIH2 TCTA chr3 49450543 + ARIH2 chr3 49019092 + Exonic hg19 BRCA TCGA-C8-A132 2 Out-of-Frame Intra-chr p21.31 p21.31 Seq+ 1874 ChimerSeq FusionScan TCGA_RNA-Seq MLLT3-CISD3 MLLT3 chr9 20620652 - CISD3 chr17 36887012 + Exonic hg19 BRCA TCGA-C8-A132 2 Out-of-Frame Inter-chr p21.3 Seq+ 1875 ChimerSeq FusionScan TCGA_RNA-Seq ATXN2-GIT2 ATXN2 chr12 111990083 - GIT2 chr12 110405308 - Exonic hg19 BRCA TCGA-C8-A132 2 In-Frame Intra-chr q24.12 q24.11 Seq+ 1876 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS6-EME1 TMPRSS6 chr22 37485617 - EME1 chr17 48455955 + Exonic hg19 BRCA TCGA-C8-A132 2 Out-of-Frame Inter-chr q12.3 Tumor suppressor gene q21.33 Seq+ 1877 ChimerSeq FusionScan TCGA_RNA-Seq NDUFB9-TDRKH NDUFB9 chr8 125551528 + TDRKH chr1 151755525 - Exonic hg19 BRCA TCGA-AC-A6IX 5 CDS-5'UTR Inter-chr q24.13 q21.3 Seq+ 1878 ChimerSeq FusionScan TCGA_RNA-Seq LRP12-LAPTM4B LRP12 chr8 105601046 - LAPTM4B chr8 98863624 + Exonic hg19 BRCA TCGA-AC-A6IX 2 Out-of-Frame Intra-chr q22.3 q22.1 Seq+ 1879 ChimerSeq FusionScan TCGA_RNA-Seq DOT1L-TLE6 DOT1L chr19 2180755 + TLE6 chr19 2978195 + Exonic hg19 BRCA TCGA-B6-A1KF 3 CDS-5'UTR Intra-chr p13.3 Oncogene Transcription factor p13.3 Seq+ 1880 ChimerSeq FusionScan TCGA_RNA-Seq DOT1L-TLE6 DOT1L chr19 2180755 + TLE6 chr19 2980097 + Exonic hg19 BRCA TCGA-B6-A1KF 2 Out-of-Frame Intra-chr p13.3 Oncogene Transcription factor p13.3 Seq+ 1881 ChimerSeq FusionScan TCGA_RNA-Seq IPPK-ASPN IPPK chr9 95396667 - ASPN chr9 95237209 - Exonic hg19 BRCA TCGA-A2-A0SW 2 CDS-5'UTR Intra-chr q22.31 q22.31 Seq+ 1882 ChimerSeq FusionScan TCGA_RNA-Seq DENND1B-RRP15 DENND1B chr1 197741997 - RRP15 chr1 218475635 + Exonic hg19 BRCA TCGA-OK-A5Q2 2 In-Frame Intra-chr q31.3 q41 Seq+ 1883 ChimerSeq FusionScan TCGA_RNA-Seq NFATC3-ZFYVE19 NFATC3 chr16 68225678 + ZFYVE19 chr15 41105535 + Exonic hg19 BRCA TCGA-AC-A62X 2 In-Frame Inter-chr q22.1 Transcription factor q15.1 1884 ChimerSeq FusionScan TCGA_RNA-Seq EPRS-DNAH14 EPRS chr1 220160483 - DNAH14 chr1 225506284 + Exonic hg19 BRCA TCGA-A7-A26I 3 Out-of-Frame Intra-chr q41 q42.12 Seq+ 1885 ChimerSeq FusionScan TCGA_RNA-Seq HPRT1-CTPS2 HPRT1 chrX 133609394 + CTPS2 chrX 16657366 - Exonic hg19 BRCA TCGA-AR-A24W 8 In-Frame Intra-chr q26.2 p22.2 Seq+ 1886 ChimerSeq FusionScan TCGA_RNA-Seq MED1-ODF3L2 MED1 chr17 37604050 - ODF3L2 chr19 464364 - Exonic hg19 BRCA TCGA-LL-A5YN 2 Out-of-Frame Inter-chr q12 Tumor suppressor gene p13.3 Seq+ 1887 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-A7-A26E 4 5'UTR-5'UTR Inter-chr p13.2 p22 1888 ChimerSeq FusionScan TCGA_RNA-Seq PRPF8-SPNS2 PRPF8 chr17 1561546 - SPNS2 chr17 4428351 + Exonic hg19 BRCA TCGA-AC-A2FO 2 Out-of-Frame Intra-chr p13.2 1889 ChimerSeq FusionScan TCGA_RNA-Seq MYO1F-AP1G2 MYO1F chr19 8642190 - AP1G2 chr14 24034408 - Exonic hg19 BRCA TCGA-EW-A1OY 3 In-Frame Inter-chr p13.2 q11.2 1890 ChimerSeq FusionScan TCGA_RNA-Seq RPL27-VAT1 RPL27 chr17 41152119 + VAT1 chr17 41168565 - Exonic hg19 BRCA TCGA-EW-A1OY 2 Out-of-Frame Intra-chr q21.31 q21.31 1891 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD28-PHF21A ANKRD28 chr3 15836729 - PHF21A chr11 45975176 - Exonic hg19 BRCA TCGA-EW-A1OY 2 In-Frame Inter-chr p25.1 p11.2 Transcription factor 1892 ChimerSeq FusionScan TCGA_RNA-Seq SRGAP2-KIF27 SRGAP2 chr1 206628370 + KIF27 chr9 86530593 - Exonic hg19 BRCA TCGA-EW-A1OY 2 CDS-5'UTR Inter-chr q32.1 Tumor suppressor gene q21.32 1893 ChimerSeq FusionScan TCGA_RNA-Seq UNC5B-PSAP UNC5B chr10 72972821 + PSAP chr10 73594262 - Exonic hg19 BRCA TCGA-EW-A1OY 2 In-Frame Intra-chr q22.1 Tumor suppressor gene q22.1 1894 ChimerSeq FusionScan TCGA_RNA-Seq RBM39-VMP1 RBM39 chr20 34309661 - VMP1 chr17 57842331 + Exonic hg19 BRCA TCGA-AC-A62V 5 In-Frame Inter-chr q11.22 q23.1 Seq+ 1895 ChimerSeq FusionScan TCGA_RNA-Seq TLK2-DCAF7 TLK2 chr17 60685509 + DCAF7 chr17 61655830 + Exonic hg19 BRCA TCGA-AC-A62V 4 In-Frame Intra-chr q23.2 Other:TLK q23.3 Seq+ 1896 ChimerSeq FusionScan TCGA_RNA-Seq CLK2-CD244 CLK2 chr1 155239278 - CD244 chr1 160808839 - Exonic hg19 BRCA TCGA-AC-A62V 3 Out-of-Frame Intra-chr q22 CMGC:CLK q23.3 Seq+ 1897 ChimerSeq FusionScan TCGA_RNA-Seq PIGU-PITPNC1 PIGU chr20 33231967 - PITPNC1 chr17 65528917 + Exonic hg19 BRCA TCGA-AC-A62V 2 In-Frame Inter-chr q11.22 q24.2 Seq+ 1898 ChimerSeq FusionScan TCGA_RNA-Seq PMEPA1-RALY PMEPA1 chr20 56284529 - RALY chr20 32619327 + Exonic hg19 BRCA TCGA-AC-A62V 2 CDS-5'UTR Intra-chr q13.31 q11.22 Seq+ 1899 ChimerSeq FusionScan TCGA_RNA-Seq SAE1-ZBTB45 SAE1 chr19 47646862 + ZBTB45 chr19 59029040 - Exonic hg19 BRCA TCGA-C8-A26Z 3 5'UTR-5'UTR Intra-chr q13.32 q13.43 Transcription factor Seq+ 1900 ChimerSeq FusionScan TCGA_RNA-Seq CTDSP2-METTL1 CTDSP2 chr12 58240154 - METTL1 chr12 58163739 - Exonic hg19 BRCA TCGA-C8-A26Z 3 In-Frame Intra-chr q14.1 q14.1 Seq+ 1901 ChimerSeq FusionScan TCGA_RNA-Seq CTDSP2-METTL1 CTDSP2 chr12 58240154 - METTL1 chr12 58165040 - Exonic hg19 BRCA TCGA-C8-A26Z 3 Out-of-Frame Intra-chr q14.1 q14.1 Seq+ 1902 ChimerSeq FusionScan TCGA_RNA-Seq UTRN-HBS1L UTRN chr6 144999714 + HBS1L chr6 135323980 - Exonic hg19 BRCA TCGA-C8-A26Z 2 Out-of-Frame Intra-chr q24.2 q23.3 Seq+ 1903 ChimerSeq FusionScan TCGA_RNA-Seq BCAT1-MRPS35 BCAT1 chr12 25031463 - MRPS35 chr12 27908113 + Exonic hg19 BRCA TCGA-D8-A1XW 2 In-Frame Intra-chr p12.1 p11.22 1904 ChimerSeq FusionScan TCGA_RNA-Seq LPP-ADIPOQ LPP chr3 188059507 + ADIPOQ chr3 186570839 + Exonic hg19 BRCA TCGA-D8-A1XW 2 5'UTR-5'UTR Intra-chr q27.3 Oncogene q27.3 Seq+ 1905 ChimerSeq FusionScan TCGA_RNA-Seq LPP-ADIPOQ LPP chr3 187943315 + ADIPOQ chr3 186570839 + Exonic hg19 BRCA TCGA-D8-A1XW 2 5'UTR-5'UTR Intra-chr q27.3 Oncogene q27.3 Seq+ 1906 ChimerSeq FusionScan TCGA_RNA-Seq TANC2-ACE TANC2 chr17 61457187 + ACE chr17 61563917 + Exonic hg19 BRCA TCGA-D8-A1JJ 5 In-Frame Intra-chr q23.2 q23.3 Seq+ 1907 ChimerSeq FusionScan TCGA_RNA-Seq PLCXD1-RAP1A PLCXD1 chrY 143061 + RAP1A chr1 112233955 + Exonic hg19 BRCA TCGA-AQ-A1H3 2 5'UTR-5'UTR Inter-chr p22.33 p13.2 Tumor suppressor gene 1908 ChimerSeq FusionScan TCGA_RNA-Seq VIPR2-SCTR VIPR2 chr7 158826903 - SCTR chr2 120199175 - Exonic hg19 BRCA TCGA-A2-A0CS 2 Out-of-Frame Inter-chr q36.3 q14.2 1909 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-A2-A0CS 2 5'UTR-5'UTR Inter-chr p13.2 p22 1910 ChimerSeq FusionScan TCGA_RNA-Seq SLC25A26-ARIH2 SLC25A26 chr3 66313803 + ARIH2 chr3 48999044 + Exonic hg19 BRCA TCGA-BH-A0EA 2 In-Frame Intra-chr p21.31 1911 ChimerSeq FusionScan TCGA_RNA-Seq PUM2-HS1BP3 PUM2 chr2 20518297 - HS1BP3 chr2 20845265 - Exonic hg19 BRCA TCGA-A8-A06O 7 Out-of-Frame Intra-chr p24.1 p24.1 Seq+ 1912 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0247-RAD51B KIAA0247 chr14 70078545 + RAD51B chr14 68758600 + Exonic hg19 BRCA TCGA-A8-A06O 3 5'UTR-CDS Intra-chr q24.1 Seq+ 1913 ChimerSeq FusionScan TCGA_RNA-Seq USP22-MYH10 USP22 chr17 20919064 - MYH10 chr17 8508300 - Exonic hg19 BRCA TCGA-A8-A06O 3 Out-of-Frame Intra-chr p11.2 p13.1 Seq+ 1914 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP35-ESR1 ARHGAP35 chr19 47440665 + ESR1 chr6 152201789 + Exonic hg19 BRCA TCGA-A8-A06O 2 In-Frame Inter-chr q13.32 Transcription factor q25.1 Oncogene Tumor suppressor gene Transcription factor 1915 ChimerSeq FusionScan TCGA_RNA-Seq MED1-STAG1 MED1 chr17 37587367 - STAG1 chr3 136221621 - Exonic hg19 BRCA TCGA-A8-A06O 2 In-Frame Inter-chr q12 Tumor suppressor gene q22.3 1916 ChimerSeq FusionScan TCGA_RNA-Seq SSFA2-KANSL1L SSFA2 chr2 182757387 + KANSL1L chr2 211019335 - Exonic hg19 BRCA TCGA-LL-A73Y 2 CDS-5'UTR Intra-chr q31.3 q34 1917 ChimerSeq FusionScan TCGA_RNA-Seq KIF2A-IPO11 KIF2A chr5 61643994 + IPO11 chr5 61733100 + Exonic hg19 BRCA TCGA-LL-A73Y 2 In-Frame Intra-chr q12.1 q12.1 Seq+ 1918 ChimerSeq FusionScan TCGA_RNA-Seq KAT6A-IKBKB KAT6A chr8 41905895 - IKBKB chr8 42146151 + Exonic hg19 BRCA TCGA-A8-A06T 3 In-Frame Intra-chr p11.21 Oncogene p11.21 Oncogene Seq+ 1919 ChimerSeq FusionScan TCGA_RNA-Seq ALDOA-PNKP ALDOA chr16 30080710 + PNKP chr19 50367017 - Exonic hg19 BRCA TCGA-A8-A06T 2 In-Frame Inter-chr p11.2 q13.33 1920 ChimerSeq FusionScan TCGA_RNA-Seq NLK-BCAS3 NLK chr17 26495683 + BCAS3 chr17 59067331 + Exonic hg19 BRCA TCGA-C8-A26X 5 In-Frame Intra-chr q11.2 CMGC:MAPK q23.2 Seq+ 1921 ChimerSeq FusionScan TCGA_RNA-Seq RBM28-MLL3 RBM28 chr7 127961318 - MLL3 chr7 151882716 - Exonic hg19 BRCA TCGA-C8-A26X 2 Out-of-Frame Intra-chr q32.1 Tumor suppressor gene Seq+ 1922 ChimerSeq FusionScan TCGA_RNA-Seq FLNA-TKTL1 FLNA chrX 153602873 - TKTL1 chrX 153533655 + Exonic hg19 BRCA TCGA-D8-A1Y0 13 5'UTR-CDS Intra-chr q28 Tumor suppressor gene q28 Seq+ 1923 ChimerSeq FusionScan TCGA_RNA-Seq WDYHV1-CDHR2 WDYHV1 chr8 124442273 + CDHR2 chr5 175992338 + Exonic hg19 BRCA TCGA-D8-A1Y0 5 CDS-5'UTR Inter-chr q24.13 q35.2 Seq+ 1924 ChimerSeq FusionScan TCGA_RNA-Seq LSM14A-ACTN4 LSM14A chr19 34663668 + ACTN4 chr19 39191239 + Exonic hg19 BRCA TCGA-AQ-A0Y5 6 Out-of-Frame Intra-chr Seq+ 1925 ChimerSeq FusionScan TCGA_RNA-Seq PHOSPHO1-KRT23 PHOSPHO1 chr17 47307829 - KRT23 chr17 39086348 - Exonic hg19 BRCA TCGA-AQ-A0Y5 4 5'UTR-CDS Intra-chr q21.32 Seq+ 1926 ChimerSeq FusionScan TCGA_RNA-Seq RMND5B-CXorf56 RMND5B chr5 177558377 + CXorf56 chrX 118676557 - Exonic hg19 BRCA TCGA-AQ-A0Y5 2 5'UTR-CDS Inter-chr q35.3 q24 1927 ChimerSeq FusionScan TCGA_RNA-Seq ZGPAT-C20orf152 ZGPAT chr20 62340516 + C20orf152 chr20 34575316 + Exonic hg19 BRCA TCGA-E2-A105 4 In-Frame Intra-chr q13.33 Transcription factor Seq+ 1928 ChimerSeq FusionScan TCGA_RNA-Seq ADAM18-LSM1 ADAM18 chr8 39581426 + LSM1 chr8 38029551 - Exonic hg19 BRCA TCGA-E2-A105 3 Out-of-Frame Intra-chr p11.23 Seq+ 1929 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BRCA TCGA-E2-A105 3 Out-of-Frame Intra-chr q22.2 q22.2 1930 ChimerSeq FusionScan TCGA_RNA-Seq MDM4-MTCP1NB MDM4 chr1 204495562 + MTCP1NB chrX 154292308 - Exonic hg19 BRCA TCGA-E2-A105 2 5'UTR-5'UTR Inter-chr q32.1 Oncogene 1931 ChimerSeq FusionScan TCGA_RNA-Seq NPC2-RAD51B NPC2 chr14 74959895 - RAD51B chr14 68878140 + Exonic hg19 BRCA TCGA-A2-A0YT 3 In-Frame Intra-chr q24.3 q24.1 Seq+ 1932 ChimerSeq FusionScan TCGA_RNA-Seq SUZ12-IARS SUZ12 chr17 30264539 + IARS chr9 94985771 - Exonic hg19 BRCA TCGA-A2-A0YT 2 In-Frame Inter-chr q11.2 Tumor suppressor gene q22.31 1933 ChimerSeq FusionScan TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5410005 - RNF216 chr7 5692141 - Exonic hg19 BRCA TCGA-A2-A0YT 2 Out-of-Frame Intra-chr p22.1 p22.1 Seq+ 1934 ChimerSeq FusionScan TCGA_RNA-Seq LARGE-SNW1 LARGE chr22 33960833 - SNW1 chr14 78187171 - Exonic hg19 BRCA TCGA-A2-A0YT 2 Out-of-Frame Inter-chr q24.3 Seq+ 1935 ChimerSeq FusionScan TCGA_RNA-Seq LARGE-SNW1 LARGE chr22 33960833 - SNW1 chr14 78189620 - Exonic hg19 BRCA TCGA-A2-A0YT 2 In-Frame Inter-chr q24.3 Seq+ 1936 ChimerSeq FusionScan TCGA_RNA-Seq TAPBP-DOCK1 TAPBP chr6 33280993 - DOCK1 chr10 128768965 + Exonic hg19 BRCA TCGA-AR-A2LK 2 5'UTR-CDS Inter-chr q26.2 1937 ChimerSeq FusionScan TCGA_RNA-Seq IKBKB-FADD IKBKB chr8 42166543 + FADD chr11 70052238 + Exonic hg19 BRCA TCGA-AR-A2LK 2 Out-of-Frame Inter-chr p11.21 Oncogene q13.3 Tumor suppressor gene Seq+ 1938 ChimerSeq FusionScan TCGA_RNA-Seq NEBL-FBXO11 NEBL chr10 21169722 - FBXO11 chr2 48066908 - Exonic hg19 BRCA TCGA-A7-A13D 5 Out-of-Frame Inter-chr p12.31 p16.3 Seq+ 1939 ChimerSeq FusionScan TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23739997 - APOO chrX 23899069 - Exonic hg19 BRCA TCGA-A7-A13D 4 In-Frame Intra-chr p22.11 p22.11 Seq+ 1940 ChimerSeq FusionScan TCGA_RNA-Seq TMEM123-MMP27 TMEM123 chr11 102319542 - MMP27 chr11 102563772 - Exonic hg19 BRCA TCGA-A7-A13D 3 Out-of-Frame Intra-chr q22.2 q22.2 Seq+ 1941 ChimerSeq FusionScan TCGA_RNA-Seq GANAB-ZNF76 GANAB chr11 62400036 - ZNF76 chr6 35248832 + Exonic hg19 BRCA TCGA-A7-A13D 3 CDS-5'UTR Inter-chr q12.3 Tumor suppressor gene p21.31 Transcription factor Seq+ 1942 ChimerSeq FusionScan TCGA_RNA-Seq RFT1-DCP1A RFT1 chr3 53137968 - DCP1A chr3 53353500 - Exonic hg19 BRCA TCGA-A7-A13D 3 In-Frame Intra-chr p21.1 p21.1 Seq+ 1943 ChimerSeq FusionScan TCGA_RNA-Seq ASXL1-TM9SF4 ASXL1 chr20 30956926 + TM9SF4 chr20 30720815 + Exonic hg19 BRCA TCGA-A7-A13D 2 In-Frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 1944 ChimerSeq FusionScan TCGA_RNA-Seq MTF2-RPL5 MTF2 chr1 93581175 + RPL5 chr1 93306107 + Exonic hg19 BRCA TCGA-A7-A13D 2 Out-of-Frame Intra-chr p22.1 Transcription factor p22.1 Tumor suppressor gene Seq+ 1945 ChimerSeq FusionScan TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23761241 - APOO chrX 23851729 - Exonic hg19 BRCA TCGA-A7-A13D 2 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 1946 ChimerSeq FusionScan TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23748643 - APOO chrX 23851627 - Exonic hg19 BRCA TCGA-A7-A13D 2 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 1947 ChimerSeq FusionScan TCGA_RNA-Seq EAF2-RGS9 EAF2 chr3 121554238 + RGS9 chr17 63221119 + Exonic hg19 BRCA TCGA-AO-A03L 4 Out-of-Frame Inter-chr q13.33 Tumor suppressor gene q24.1 Seq+ 1948 ChimerSeq FusionScan TCGA_RNA-Seq OSBPL2-EDEM2 OSBPL2 chr20 60831277 + EDEM2 chr20 33730281 - Exonic hg19 BRCA TCGA-AO-A03L 3 Out-of-Frame Intra-chr q13.33 q11.22 Seq+ 1949 ChimerSeq FusionScan TCGA_RNA-Seq IQCB1-CACNG4 IQCB1 chr3 121553237 - CACNG4 chr17 65014304 + Exonic hg19 BRCA TCGA-AO-A03L 3 5'UTR-CDS Inter-chr q13.33 q24.2 Seq+ 1950 ChimerSeq FusionScan TCGA_RNA-Seq DHX35-RG9MTD1 DHX35 chr20 37650578 + RG9MTD1 chr3 101283613 + Exonic hg19 BRCA TCGA-AO-A03L 2 5'UTR-5'UTR Inter-chr q11.23 1951 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-AO-A03L 2 5'UTR-5'UTR Inter-chr p13.2 p22 1952 ChimerSeq FusionScan TCGA_RNA-Seq ITGB5-PARP14 ITGB5 chr3 124487859 - PARP14 chr3 122427036 + Exonic hg19 BRCA TCGA-AO-A03L 2 Out-of-Frame Intra-chr q21.2 q21.1 Seq+ 1953 ChimerSeq FusionScan TCGA_RNA-Seq OSBPL2-EDEM2 OSBPL2 chr20 60835181 + EDEM2 chr20 33734738 - Exonic hg19 BRCA TCGA-AO-A03L 2 In-Frame Intra-chr q13.33 q11.22 Seq+ 1954 ChimerSeq FusionScan TCGA_RNA-Seq SCGB1D2-ALDH3B1 SCGB1D2 chr11 62009834 + ALDH3B1 chr11 67785996 + Exonic hg19 BRCA TCGA-A7-A26J 4 Out-of-Frame Intra-chr q12.3 q13.2 Seq+ 1955 ChimerSeq FusionScan TCGA_RNA-Seq PRKRIR-ANO1 PRKRIR chr11 76091791 - ANO1 chr11 70016992 + Exonic hg19 BRCA TCGA-5T-A9QA 3 Out-of-Frame Intra-chr q13.3 Seq+ 1956 ChimerSeq FusionScan TCGA_RNA-Seq SSH2-DTD1 SSH2 chr17 28120911 - DTD1 chr20 18724743 + Exonic hg19 BRCA TCGA-E9-A243 3 Out-of-Frame Inter-chr q11.2 p11.23 Seq+ 1957 ChimerSeq FusionScan TCGA_RNA-Seq WARS2-TPST1 WARS2 chr1 119618972 - TPST1 chr7 65817491 + Exonic hg19 BRCA TCGA-E9-A243 3 In-Frame Inter-chr p12 q11.21 Seq+ 1958 ChimerSeq FusionScan TCGA_RNA-Seq ATAD2-PODXL ATAD2 chr8 124351550 - PODXL chr7 131196192 - Exonic hg19 BRCA TCGA-E9-A243 2 In-Frame Inter-chr q24.13 q32.3 Seq+ 1959 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC7-MICU1 ZCCHC7 chr9 37126939 + MICU1 chr10 74183129 - Exonic hg19 BRCA TCGA-E9-A243 2 Out-of-Frame Inter-chr p13.2 q22.1 1960 ChimerSeq FusionScan TCGA_RNA-Seq CBX4-EFCAB5 CBX4 chr17 77811635 - EFCAB5 chr17 28418888 + Exonic hg19 BRCA TCGA-A8-A09C 8 Out-of-Frame Intra-chr q25.3 q11.2 Seq+ 1961 ChimerSeq FusionScan TCGA_RNA-Seq CBX4-EFCAB5 CBX4 chr17 77811635 - EFCAB5 chr17 28434851 + Exonic hg19 BRCA TCGA-A8-A09C 8 Out-of-Frame Intra-chr q25.3 q11.2 Seq+ 1962 ChimerSeq FusionScan TCGA_RNA-Seq TMEM135-ALDH3B2 TMEM135 chr11 86749228 + ALDH3B2 chr11 67435106 - Exonic hg19 BRCA TCGA-A8-A09C 5 5'UTR-5'UTR Intra-chr q14.2 q13.2 Seq+ 1963 ChimerSeq FusionScan TCGA_RNA-Seq SSH2-NDUFS4 SSH2 chr17 28256955 - NDUFS4 chr5 52899281 + Exonic hg19 BRCA TCGA-A8-A09C 4 Out-of-Frame Inter-chr q11.2 q11.2 Seq+ 1964 ChimerSeq FusionScan TCGA_RNA-Seq TMEM135-ALDH3B2 TMEM135 chr11 86749228 + ALDH3B2 chr11 67434487 - Exonic hg19 BRCA TCGA-A8-A09C 3 5'UTR-5'UTR Intra-chr q14.2 q13.2 Seq+ 1965 ChimerSeq FusionScan TCGA_RNA-Seq WDPCP-C3orf26 WDPCP chr2 63815330 - C3orf26 chr3 99865816 + Exonic hg19 BRCA TCGA-A8-A09C 2 Out-of-Frame Inter-chr p15 1966 ChimerSeq FusionScan TCGA_RNA-Seq SPTBN2-GDPD4 SPTBN2 chr11 66463747 - GDPD4 chr11 76998463 - Exonic hg19 BRCA TCGA-A8-A09C 2 CDS-5'UTR Intra-chr q13.2 q13.5 Seq+ 1967 ChimerSeq FusionScan TCGA_RNA-Seq PACS1-USP28 PACS1 chr11 65838313 + USP28 chr11 113686104 - Exonic hg19 BRCA TCGA-GM-A4E0 2 In-Frame Intra-chr q13.1 q23.2 1968 ChimerSeq FusionScan TCGA_RNA-Seq TYW1-TPST1 TYW1 chr7 66520874 + TPST1 chr7 65751497 + Exonic hg19 BRCA TCGA-A2-A25E 2 Out-of-Frame Intra-chr q11.21 q11.21 Seq+ 1969 ChimerSeq FusionScan TCGA_RNA-Seq ARID1A-YTHDF2 ARID1A chr1 27059283 + YTHDF2 chr1 29064169 + Exonic hg19 BRCA TCGA-E2-A14T 3 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p35.3 Seq+ 1970 ChimerSeq FusionScan TCGA_RNA-Seq TMEM117-ZCRB1 TMEM117 chr12 44238731 + ZCRB1 chr12 42717906 - Exonic hg19 BRCA TCGA-E2-A14T 3 CDS-5'UTR Intra-chr q12 q12 Seq+ 1971 ChimerSeq FusionScan TCGA_RNA-Seq THRAP3-MUTYH THRAP3 chr1 36690106 + MUTYH chr1 45800183 - Exonic hg19 BRCA TCGA-E2-A14T 3 5'UTR-5'UTR Intra-chr p34.3 p34.1 Oncogene Seq+ 1972 ChimerSeq FusionScan TCGA_RNA-Seq PVRL2-C9orf3 PVRL2 chr19 45377735 + C9orf3 chr9 97848963 + Exonic hg19 BRCA TCGA-E2-A14T 2 CDS-3'UTR Inter-chr q22.32 1973 ChimerSeq FusionScan TCGA_RNA-Seq SAMD12-FDCSP SAMD12 chr8 119592953 - FDCSP chr4 71096911 + Exonic hg19 BRCA TCGA-A2-A0T1 3 CDS-5'UTR Inter-chr q24.12 q13.3 Seq+ 1974 ChimerSeq FusionScan TCGA_RNA-Seq ACOT7-NSMCE2 ACOT7 chr1 6453316 - NSMCE2 chr8 126379009 + Exonic hg19 BRCA TCGA-A2-A0T1 2 In-Frame Inter-chr p36.31 q24.13 Seq+ 1975 ChimerSeq FusionScan TCGA_RNA-Seq PCYT2-ANAPC11 PCYT2 chr17 79864339 - ANAPC11 chr17 79857795 + Exonic hg19 BRCA TCGA-A2-A0T1 2 Out-of-Frame Intra-chr q25.3 q25.3 Seq+ 1976 ChimerSeq FusionScan TCGA_RNA-Seq PCYT2-ANAPC11 PCYT2 chr17 79865429 - ANAPC11 chr17 79857795 + Exonic hg19 BRCA TCGA-A2-A0T1 2 Out-of-Frame Intra-chr q25.3 q25.3 Seq+ 1977 ChimerSeq FusionScan TCGA_RNA-Seq DENND1A-LRRC69 DENND1A chr9 126519981 - LRRC69 chr8 92231117 + Exonic hg19 BRCA TCGA-A2-A0T1 2 Out-of-Frame Inter-chr q33.3 q21.3 Seq+ 1978 ChimerSeq FusionScan TCGA_RNA-Seq SACM1L-LIMD1 SACM1L chr3 45730989 + LIMD1 chr3 45707141 + Exonic hg19 BRCA TCGA-AN-A0AT 6 Out-of-Frame Intra-chr p21.31 p21.31 Tumor suppressor gene Seq+ 1979 ChimerSeq FusionScan TCGA_RNA-Seq SMARCA4-DNM2 SMARCA4 chr19 11071850 + DNM2 chr19 10883154 + Exonic hg19 BRCA TCGA-A7-A4SD 4 5'UTR-CDS Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 1980 ChimerSeq FusionScan TCGA_RNA-Seq TLK2-METTL2B TLK2 chr17 60613698 + METTL2B chr7 128140956 + Exonic hg19 BRCA TCGA-A7-A4SD 2 Out-of-Frame Inter-chr q23.2 Other:TLK q32.1 1981 ChimerSeq FusionScan TCGA_RNA-Seq PRICKLE1-SND1 PRICKLE1 chr12 42983266 - SND1 chr7 127361340 + Exonic hg19 BRCA TCGA-A7-A4SD 2 5'UTR-CDS Inter-chr q12 Tumor suppressor gene q32.1 Seq+ 1982 ChimerSeq FusionScan TCGA_RNA-Seq ATP2C2-WDR11 ATP2C2 chr16 84432215 + WDR11 chr10 122640337 + Exonic hg19 BRCA TCGA-D8-A27E 2 Out-of-Frame Inter-chr q24.1 q26.12 Tumor suppressor gene 1983 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-BH-A0H3 3 5'UTR-5'UTR Inter-chr p13.2 p22 1984 ChimerSeq FusionScan TCGA_RNA-Seq SEPT7-VPS45 SEPT7 chr7 35913385 + VPS45 chr1 150082610 + Exonic hg19 BRCA TCGA-BH-A0H3 2 In-Frame Inter-chr p14.2 q21.2 1985 ChimerSeq FusionScan TCGA_RNA-Seq KDM2A-RPS6KB2 KDM2A chr11 66888829 + RPS6KB2 chr11 67200810 + Exonic hg19 BRCA TCGA-AR-A1AY 6 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 1986 ChimerSeq FusionScan TCGA_RNA-Seq DDX39B-PRPH2 DDX39B chr6 31506539 - PRPH2 chr6 42672349 - Exonic hg19 BRCA TCGA-AR-A1AY 2 5'UTR-CDS Intra-chr p21.1 Seq+ 1987 ChimerSeq FusionScan TCGA_RNA-Seq LRP5-HMGN1 LRP5 chr11 68197168 + HMGN1 chr21 40720503 - Exonic hg19 BRCA TCGA-AR-A1AY 2 Out-of-Frame Inter-chr q13.2 q22.2 1988 ChimerSeq FusionScan TCGA_RNA-Seq MBD2-DOCK2 MBD2 chr18 51715243 - DOCK2 chr5 169502950 + Exonic hg19 BRCA TCGA-AR-A1AY 2 In-Frame Inter-chr q21.2 Transcription factor q35.1 Seq+ 1989 ChimerSeq FusionScan TCGA_RNA-Seq BID-BCL2L13 BID chr22 18257146 - BCL2L13 chr22 18209442 + Exonic hg19 BRCA TCGA-E2-A14Z 2 5'UTR-CDS Intra-chr q11.21 q11.21 1990 ChimerSeq FusionScan TCGA_RNA-Seq ATF2-DIRC3 ATF2 chr2 176015787 - DIRC3 chr2 218192875 - Exonic hg19 BRCA TCGA-E2-A14Z 2 3'UTR-3'UTR Intra-chr q31.1 Transcription factor q35 Seq+ 1991 ChimerSeq FusionScan TCGA_RNA-Seq KDM4B-UBA52 KDM4B chr19 5082515 + UBA52 chr19 18684102 + Exonic hg19 BRCA TCGA-E2-A14Z 2 CDS-5'UTR Intra-chr p13.3 p13.11 Seq+ 1992 ChimerSeq FusionScan TCGA_RNA-Seq KATNA1-PPP2R1A KATNA1 chr6 149922729 - PPP2R1A chr19 52719781 + Exonic hg19 BRCA TCGA-A8-A08I 5 In-Frame Inter-chr q25.1 q13.41 Oncogene Seq+ 1993 ChimerSeq FusionScan TCGA_RNA-Seq FAM168A-DNAJB13 FAM168A chr11 73308967 - DNAJB13 chr11 73669361 + Exonic hg19 BRCA TCGA-A8-A08I 4 5'UTR-CDS Intra-chr q13.4 q13.4 Seq+ 1994 ChimerSeq FusionScan TCGA_RNA-Seq C19orf63-MBOAT7 C19orf63 chr19 50984234 + MBOAT7 chr19 54692365 - Exonic hg19 BRCA TCGA-A8-A08I 3 CDS-5'UTR Intra-chr Seq+ 1995 ChimerSeq FusionScan TCGA_RNA-Seq AKAP7-ESR1 AKAP7 chr6 131466556 + ESR1 chr6 152419866 + Exonic hg19 BRCA TCGA-A8-A08I 2 Out-of-Frame Intra-chr q23.2 q25.1 Oncogene Tumor suppressor gene Transcription factor Seq+ 1996 ChimerSeq FusionScan TCGA_RNA-Seq KATNA1-PPP2R1A KATNA1 chr6 149924403 - PPP2R1A chr19 52719781 + Exonic hg19 BRCA TCGA-A8-A08I 2 In-Frame Inter-chr q25.1 q13.41 Oncogene Seq+ 1997 ChimerSeq FusionScan TCGA_RNA-Seq PHF20-DYNLRB1 PHF20 chr20 34360001 + DYNLRB1 chr20 33114072 + Exonic hg19 BRCA TCGA-E2-A1LE 8 5'UTR-CDS Intra-chr q11.22 Transcription factor q11.22 Seq+ 1998 ChimerSeq FusionScan TCGA_RNA-Seq PDE10A-PSMB1 PDE10A chr6 165956927 - PSMB1 chr6 170846428 - Exonic hg19 BRCA TCGA-E2-A1LE 5 In-Frame Intra-chr q27 Seq+ 1999 ChimerSeq FusionScan TCGA_RNA-Seq PLCD4-VIL1 PLCD4 chr2 219487601 + VIL1 chr2 219313945 + Exonic hg19 BRCA TCGA-E2-A1LE 2 Out-of-Frame Intra-chr q35 q35 Tumor suppressor gene Seq+ 2000 ChimerSeq FusionScan TCGA_RNA-Seq STARD3-GRB7 STARD3 chr17 37793484 + GRB7 chr17 37898504 + Exonic hg19 BRCA TCGA-E2-A1LE 2 5'UTR-5'UTR Intra-chr q12 q12 Seq+ 2001 ChimerSeq FusionScan TCGA_RNA-Seq CD276-PARP16 CD276 chr15 73976801 + PARP16 chr15 65563410 - Exonic hg19 BRCA TCGA-E2-A1LE 2 5'UTR-CDS Intra-chr q24.1 q22.31 Seq+ 2002 ChimerSeq FusionScan TCGA_RNA-Seq DCP2-SRP19 DCP2 chr5 112343739 + SRP19 chr5 112203100 + Exonic hg19 BRCA TCGA-E2-A1LE 2 In-Frame Intra-chr q22.2 q22.2 Seq+ 2003 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-AR-A24O 2 5'UTR-5'UTR Inter-chr p13.2 p22 2004 ChimerSeq FusionScan TCGA_RNA-Seq ERBB4-RUFY3 ERBB4 chr2 212285165 - RUFY3 chr4 71670064 + Exonic hg19 BRCA TCGA-B6-A0WW 2 In-Frame Inter-chr q34 Oncogene Tumor suppressor gene q13.3 2005 ChimerSeq FusionScan TCGA_RNA-Seq MSI2-PRR15L MSI2 chr17 55704664 + PRR15L chr17 46030629 - Exonic hg19 BRCA TCGA-C8-A275 3 CDS-5'UTR Intra-chr q22 q21.32 Seq+ 2006 ChimerSeq FusionScan TCGA_RNA-Seq TXNRD1-USP30 TXNRD1 chr12 104682818 + USP30 chr12 109505328 + Exonic hg19 BRCA TCGA-C8-A275 3 Out-of-Frame Intra-chr q23.3 q24.11 Seq+ 2007 ChimerSeq FusionScan TCGA_RNA-Seq TANC2-SSH2 TANC2 chr17 61086987 + SSH2 chr17 28004759 - Exonic hg19 BRCA TCGA-C8-A275 3 Out-of-Frame Intra-chr q23.2 q11.2 Seq+ 2008 ChimerSeq FusionScan TCGA_RNA-Seq STARD3-STRADA STARD3 chr17 37793484 + STRADA chr17 61791468 - Exonic hg19 BRCA TCGA-C8-A275 3 5'UTR-5'UTR Intra-chr q12 q23.3 Tumor suppressor gene Seq+ 2009 ChimerSeq FusionScan TCGA_RNA-Seq SSH2-EFCAB5 SSH2 chr17 28120911 - EFCAB5 chr17 28320182 + Exonic hg19 BRCA TCGA-C8-A275 3 In-Frame Intra-chr q11.2 q11.2 Seq+ 2010 ChimerSeq FusionScan TCGA_RNA-Seq MSI2-EFCAB5 MSI2 chr17 55607085 + EFCAB5 chr17 28434851 + Exonic hg19 BRCA TCGA-C8-A275 2 In-Frame Intra-chr q22 q11.2 Seq+ 2011 ChimerSeq FusionScan TCGA_RNA-Seq SKAP1-YPEL2 SKAP1 chr17 46423266 - YPEL2 chr17 57465687 + Exonic hg19 BRCA TCGA-C8-A275 2 Out-of-Frame Intra-chr q21.32 q22 Seq+ 2012 ChimerSeq FusionScan TCGA_RNA-Seq MSI2-EFCAB5 MSI2 chr17 55607085 + EFCAB5 chr17 28418888 + Exonic hg19 BRCA TCGA-C8-A275 2 In-Frame Intra-chr q22 q11.2 Seq+ 2013 ChimerSeq FusionScan TCGA_RNA-Seq MSI2-EFCAB5 MSI2 chr17 55607085 + EFCAB5 chr17 28378135 + Exonic hg19 BRCA TCGA-C8-A275 2 Out-of-Frame Intra-chr q22 q11.2 Seq+ 2014 ChimerSeq FusionScan TCGA_RNA-Seq TANC2-SSH2 TANC2 chr17 61086987 + SSH2 chr17 27999147 - Exonic hg19 BRCA TCGA-C8-A275 2 Out-of-Frame Intra-chr q23.2 q11.2 Seq+ 2015 ChimerSeq FusionScan TCGA_RNA-Seq KAT6B-C10orf96 KAT6B chr10 76741686 + C10orf96 chr10 118100245 + Exonic hg19 BRCA TCGA-AQ-A04L 15 In-Frame Intra-chr Oncogene Seq+ 2016 ChimerSeq FusionScan TCGA_RNA-Seq RAPGEF5-PPAPDC1A RAPGEF5 chr7 22270464 - PPAPDC1A chr10 122334642 + Exonic hg19 BRCA TCGA-AQ-A04L 6 Out-of-Frame Inter-chr p15.3 Seq+ 2017 ChimerSeq FusionScan TCGA_RNA-Seq RAPGEF5-PPAPDC1A RAPGEF5 chr7 22270464 - PPAPDC1A chr10 122348814 + Exonic hg19 BRCA TCGA-AQ-A04L 4 Out-of-Frame Inter-chr p15.3 Seq+ 2018 ChimerSeq FusionScan TCGA_RNA-Seq CDH1-NPFFR2 CDH1 chr16 68772314 + NPFFR2 chr4 73003756 + Exonic hg19 BRCA TCGA-AQ-A04L 4 In-Frame Inter-chr q22.1 Oncogene Tumor suppressor gene q13.3 Seq+ 2019 ChimerSeq FusionScan TCGA_RNA-Seq TSPAN14-SH2D4B TSPAN14 chr10 82249070 + SH2D4B chr10 82348385 + Exonic hg19 BRCA TCGA-AQ-A04L 4 In-Frame Intra-chr q23.1 q23.1 2020 ChimerSeq FusionScan TCGA_RNA-Seq STK11-TYK2 STK11 chr19 1207202 + TYK2 chr19 10473333 - Exonic hg19 BRCA TCGA-AQ-A04L 4 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.2 TK:JakA Seq+ 2021 ChimerSeq FusionScan TCGA_RNA-Seq UTRN-LYRM4 UTRN chr6 144795895 + LYRM4 chr6 5109725 - Exonic hg19 BRCA TCGA-AQ-A04L 3 In-Frame Intra-chr q24.2 p25.1 Seq+ 2022 ChimerSeq FusionScan TCGA_RNA-Seq MOB1B-PPAPDC1A MOB1B chr4 71768267 + PPAPDC1A chr10 122263329 + Exonic hg19 BRCA TCGA-AQ-A04L 3 In-Frame Inter-chr q13.3 Tumor suppressor gene Seq+ 2023 ChimerSeq FusionScan TCGA_RNA-Seq STK11-TYK2 STK11 chr19 1207202 + TYK2 chr19 10476574 - Exonic hg19 BRCA TCGA-AQ-A04L 3 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.2 TK:JakA Seq+ 2024 ChimerSeq FusionScan TCGA_RNA-Seq TSPAN14-FAM213A TSPAN14 chr10 82214127 + FAM213A chr10 82180221 + Exonic hg19 BRCA TCGA-AQ-A04L 2 5'UTR-5'UTR Intra-chr q23.1 q23.1 Seq+ 2025 ChimerSeq FusionScan TCGA_RNA-Seq FAM213A-YTHDC1 FAM213A chr10 82180401 + YTHDC1 chr4 69180041 - Exonic hg19 BRCA TCGA-AQ-A04L 2 Out-of-Frame Inter-chr q23.1 Seq+ 2026 ChimerSeq FusionScan TCGA_RNA-Seq TCF3-SYTL5 TCF3 chr19 1615283 - SYTL5 chrX 37985840 + Exonic hg19 BRCA TCGA-AR-A0U3 3 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p11.4 Seq+ 2027 ChimerSeq FusionScan TCGA_RNA-Seq AP5S1-RNF24 AP5S1 chr20 3802940 + RNF24 chr20 3928926 - Exonic hg19 BRCA TCGA-AR-A0U3 2 In-Frame Intra-chr p13 p13 Seq+ 2028 ChimerSeq FusionScan TCGA_RNA-Seq TCF3-SYTL5 TCF3 chr19 1615684 - SYTL5 chrX 37985840 + Exonic hg19 BRCA TCGA-AR-A0U3 2 Out-of-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p11.4 Seq+ 2029 ChimerSeq FusionScan TCGA_RNA-Seq FAM173B-CADPS2 FAM173B chr5 10236589 - CADPS2 chr7 122377122 - Exonic hg19 BRCA TCGA-BH-A1F5 2 In-Frame Inter-chr p15.2 q31.32 2030 ChimerSeq FusionScan TCGA_RNA-Seq TUBGCP3-FARP1 TUBGCP3 chr13 113200012 - FARP1 chr13 99098351 + Exonic hg19 BRCA TCGA-GM-A2DF 4 In-Frame Intra-chr q32.2 Seq+ 2031 ChimerSeq FusionScan TCGA_RNA-Seq WAC-UBAC2 WAC chr10 28872434 + UBAC2 chr13 99966350 + Exonic hg19 BRCA TCGA-GM-A2DF 2 Out-of-Frame Inter-chr p12.1 q32.3 Seq+ 2032 ChimerSeq FusionScan TCGA_RNA-Seq GOLGA4-HSPA8 GOLGA4 chr3 37292975 + HSPA8 chr11 122930976 - Exonic hg19 BRCA TCGA-GM-A2DF 2 In-Frame Inter-chr p22.2 q24.1 Seq+ 2033 ChimerSeq FusionScan TCGA_RNA-Seq RARA-SKAP1 RARA chr17 38487648 + SKAP1 chr17 46214699 - Exonic hg19 BRCA TCGA-B6-A0IN 6 Out-of-Frame Intra-chr q21.2 Oncogene Transcription factor q21.32 Seq+ 2034 ChimerSeq FusionScan TCGA_RNA-Seq C7orf42-CALN1 C7orf42 chr7 66386448 + CALN1 chr7 71488754 - Exonic hg19 BRCA TCGA-B6-A0IN 3 5'UTR-CDS Intra-chr q11.22 2035 ChimerSeq FusionScan TCGA_RNA-Seq APPBP2-DCAF7 APPBP2 chr17 58603154 - DCAF7 chr17 61655830 + Exonic hg19 BRCA TCGA-B6-A0IN 3 In-Frame Intra-chr q23.2 q23.3 Seq+ 2036 ChimerSeq FusionScan TCGA_RNA-Seq RARA-SKAP1 RARA chr17 38499119 + SKAP1 chr17 46214699 - Exonic hg19 BRCA TCGA-B6-A0IN 2 Out-of-Frame Intra-chr q21.2 Oncogene Transcription factor q21.32 Seq+ 2037 ChimerSeq FusionScan TCGA_RNA-Seq RARA-SKAP1 RARA chr17 38487648 + SKAP1 chr17 46211178 - Exonic hg19 BRCA TCGA-B6-A0IN 2 CDS-3'UTR Intra-chr q21.2 Oncogene Transcription factor q21.32 Seq+ 2038 ChimerSeq FusionScan TCGA_RNA-Seq FBXL20-CDC6 FBXL20 chr17 37557613 - CDC6 chr17 38445659 + Exonic hg19 BRCA TCGA-C8-A278 2 CDS-3'UTR Intra-chr q12 q21.2 Seq+ 2039 ChimerSeq FusionScan TCGA_RNA-Seq PBX1-RHBG PBX1 chr1 164781386 + RHBG chr1 156354317 + Exonic hg19 BRCA TCGA-C8-A278 2 In-Frame Intra-chr q23.3 Oncogene Transcription factor q22 Seq+ 2040 ChimerSeq FusionScan TCGA_RNA-Seq ZNF451-PRIM2 ZNF451 chr6 56963939 + PRIM2 chr6 57372287 + Exonic hg19 BRCA TCGA-C8-A278 2 In-Frame Intra-chr p12.1 Transcription factor p11.2 Seq+ 2041 ChimerSeq FusionScan TCGA_RNA-Seq FAM3C-SUSD2 FAM3C chr7 121011353 - SUSD2 chr22 24581061 + Exonic hg19 BRCA TCGA-E9-A247 6 In-Frame Inter-chr q31.31 q11.23 Seq+ 2042 ChimerSeq FusionScan TCGA_RNA-Seq TOX3-PHKB TOX3 chr16 52580548 - PHKB chr16 47644736 + Exonic hg19 BRCA TCGA-E9-A247 5 Out-of-Frame Intra-chr q12.1 q12.1 Seq+ 2043 ChimerSeq FusionScan TCGA_RNA-Seq HIPK2-ZC3HAV1 HIPK2 chr7 139477403 - ZC3HAV1 chr7 138774505 - Exonic hg19 BRCA TCGA-E9-A247 4 Out-of-Frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Seq+ 2044 ChimerSeq FusionScan TCGA_RNA-Seq TOX3-PHKB TOX3 chr16 52580548 - PHKB chr16 47627410 + Exonic hg19 BRCA TCGA-E9-A247 3 In-Frame Intra-chr q12.1 q12.1 Seq+ 2045 ChimerSeq FusionScan TCGA_RNA-Seq MBOAT1-FYN MBOAT1 chr6 20212366 - FYN chr6 111983150 - Exonic hg19 BRCA TCGA-OL-A6VO 2 Out-of-Frame Intra-chr p22.3 q21 TK:Src Seq+ 2046 ChimerSeq FusionScan TCGA_RNA-Seq PDS5B-UBR2 PDS5B chr13 33160730 + UBR2 chr6 42658769 + Exonic hg19 BRCA TCGA-BH-A209 11 5'UTR-CDS Inter-chr q13.1 Tumor suppressor gene p21.1 Seq+ 2047 ChimerSeq FusionScan TCGA_RNA-Seq TTC39A-CRISP1 TTC39A chr1 51760062 - CRISP1 chr6 49819842 - Exonic hg19 BRCA TCGA-BH-A209 6 In-Frame Inter-chr p32.3 p12.3 Seq+ 2048 ChimerSeq FusionScan TCGA_RNA-Seq TTC39A-CRISP1 TTC39A chr1 51760062 - CRISP1 chr6 49825115 - Exonic hg19 BRCA TCGA-BH-A209 4 CDS-5'UTR Inter-chr p32.3 p12.3 Seq+ 2049 ChimerSeq FusionScan TCGA_RNA-Seq PCMTD2-SNX6 PCMTD2 chr20 62896782 + SNX6 chr14 35078948 - Exonic hg19 BRCA TCGA-AO-A12D 3 In-Frame Inter-chr q13.1 Seq+ 2050 ChimerSeq FusionScan TCGA_RNA-Seq SUSD4-NVL SUSD4 chr1 223536619 - NVL chr1 224468887 - Exonic hg19 BRCA TCGA-AO-A12D 2 Out-of-Frame Intra-chr q41 q42.11 Seq+ 2051 ChimerSeq FusionScan TCGA_RNA-Seq SRC-MANBAL SRC chr20 35974658 + MANBAL chr20 35929610 + Exonic hg19 BRCA TCGA-E2-A1AZ 2 5'UTR-5'UTR Intra-chr q11.23 TK:Src Oncogene q11.23 Seq+ 2052 ChimerSeq FusionScan TCGA_RNA-Seq WIPF2-SP2 WIPF2 chr17 38375744 + SP2 chr17 46000327 + Exonic hg19 BRCA TCGA-EW-A6SD 15 5'UTR-CDS Intra-chr q21.2 q21.32 Transcription factor Seq+ 2053 ChimerSeq FusionScan TCGA_RNA-Seq PKP2-DNM1L PKP2 chr12 32993961 - DNM1L chr12 32895522 + Exonic hg19 BRCA TCGA-EW-A6SD 5 In-Frame Intra-chr p11.21 p11.21 Seq+ 2054 ChimerSeq FusionScan TCGA_RNA-Seq RNH1-SCT RNH1 chr11 507112 - SCT chr11 626989 - Exonic hg19 BRCA TCGA-E9-A1NA 7 5'UTR-CDS Intra-chr Tumor suppressor gene Seq+ 2055 ChimerSeq FusionScan TCGA_RNA-Seq SEMA4C-AFF3 SEMA4C chr2 97527315 - AFF3 chr2 100266128 - Exonic hg19 BRCA TCGA-E9-A1NA 6 Out-of-Frame Intra-chr q11.2 q11.2 Oncogene Seq+ 2056 ChimerSeq FusionScan TCGA_RNA-Seq DCP2-REEP5 DCP2 chr5 112312683 + REEP5 chr5 112256953 - Exonic hg19 BRCA TCGA-E9-A1NA 4 Out-of-Frame Intra-chr q22.2 q22.2 Seq+ 2057 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHB2-FAM168B PLEKHB2 chr2 131862971 + FAM168B chr2 131840230 - Exonic hg19 BRCA TCGA-E9-A1NA 4 5'UTR-5'UTR Intra-chr q21.1 q21.1 Seq+ 2058 ChimerSeq FusionScan TCGA_RNA-Seq PTPRK-HECA PTPRK chr6 128841403 - HECA chr6 139487420 + Exonic hg19 BRCA TCGA-E9-A1NA 4 In-Frame Intra-chr Tumor suppressor gene q24.1 Tumor suppressor gene Seq+ 2059 ChimerSeq FusionScan TCGA_RNA-Seq BCAS3-WIPI1 BCAS3 chr17 58885437 + WIPI1 chr17 66432620 - Exonic hg19 BRCA TCGA-E9-A1NA 3 Out-of-Frame Intra-chr q23.2 q24.2 Seq+ 2060 ChimerSeq FusionScan TCGA_RNA-Seq RNH1-SCT RNH1 chr11 507112 - SCT chr11 626530 - Exonic hg19 BRCA TCGA-E9-A1NA 3 5'UTR-CDS Intra-chr Tumor suppressor gene Seq+ 2061 ChimerSeq FusionScan TCGA_RNA-Seq UHMK1-PPOX UHMK1 chr1 162487980 + PPOX chr1 161140409 + Exonic hg19 BRCA TCGA-E9-A1NA 3 In-Frame Intra-chr q23.3 q23.3 Seq+ 2062 ChimerSeq FusionScan TCGA_RNA-Seq RNH1-SCT RNH1 chr11 507112 - SCT chr11 626789 - Exonic hg19 BRCA TCGA-E9-A1NA 3 5'UTR-CDS Intra-chr Tumor suppressor gene Seq+ 2063 ChimerSeq FusionScan TCGA_RNA-Seq DCP2-REEP5 DCP2 chr5 112312683 + REEP5 chr5 112238215 - Exonic hg19 BRCA TCGA-E9-A1NA 3 In-Frame Intra-chr q22.2 q22.2 Seq+ 2064 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB1-MTHFD1 ZBTB1 chr14 64990120 + MTHFD1 chr14 64894054 + Exonic hg19 BRCA TCGA-E9-A1NA 2 In-Frame Intra-chr q23.3 Transcription factor q23.3 Seq+ 2065 ChimerSeq FusionScan TCGA_RNA-Seq VMP1-CLTC VMP1 chr17 57816308 + CLTC chr17 57721636 + Exonic hg19 BRCA TCGA-E9-A1NA 2 In-Frame Intra-chr q23.1 q23.1 Seq+ 2066 ChimerSeq FusionScan TCGA_RNA-Seq MFSD12-PIP5K1C MFSD12 chr19 3557103 - PIP5K1C chr19 3646056 - Exonic hg19 BRCA TCGA-E9-A1NA 2 Out-of-Frame Intra-chr p13.3 p13.3 2067 ChimerSeq FusionScan TCGA_RNA-Seq UBE2D3-SLC9B1 UBE2D3 chr4 103789871 - SLC9B1 chr4 103912869 - Exonic hg19 BRCA TCGA-E9-A1NA 2 5'UTR-5'UTR Intra-chr q24 q24 Seq+ 2068 ChimerSeq FusionScan TCGA_RNA-Seq FAM172A-KIAA0825 FAM172A chr5 93217175 - KIAA0825 chr5 93489829 - Exonic hg19 BRCA TCGA-E9-A1NA 2 Out-of-Frame Intra-chr q15 Tumor suppressor gene q15 Seq+ 2069 ChimerSeq FusionScan TCGA_RNA-Seq SLC37A1-PCP4 SLC37A1 chr21 43988548 + PCP4 chr21 41300908 + Exonic hg19 BRCA TCGA-E9-A1NA 2 In-Frame Intra-chr q22.3 q22.2 Seq+ 2070 ChimerSeq FusionScan TCGA_RNA-Seq USP32-APPBP2 USP32 chr17 58422841 - APPBP2 chr17 58543820 - Exonic hg19 BRCA TCGA-E9-A1NA 2 Out-of-Frame Intra-chr q23.2 q23.2 Seq+ 2071 ChimerSeq FusionScan TCGA_RNA-Seq ABL1-NUP214 ABL1 chr9 133589842 + NUP214 chr9 134007982 + Exonic hg19 BRCA TCGA-D8-A1JC 3 Out-of-Frame Intra-chr q34.12 TK:Abl Oncogene q34.13 Oncogene Pub Seq+ 2072 ChimerSeq FusionScan TCGA_RNA-Seq UVRAG-MAP6 UVRAG chr11 75526569 + MAP6 chr11 75319367 - Exonic hg19 BRCA TCGA-D8-A1JC 2 Out-of-Frame Intra-chr q13.5 Tumor suppressor gene q13.5 Seq+ 2073 ChimerSeq FusionScan TCGA_RNA-Seq FARS2-RNF128 FARS2 chr6 5261893 + RNF128 chrX 106016142 + Exonic hg19 BRCA TCGA-BH-A0E7 2 5'UTR-CDS Inter-chr p25.1 q22.3 2074 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-AO-A0JA 2 5'UTR-5'UTR Inter-chr p13.2 p22 2075 ChimerSeq FusionScan TCGA_RNA-Seq ACTB-RNF216 ACTB chr7 5570154 - RNF216 chr7 5756397 - Exonic hg19 BRCA TCGA-BH-A18T 13 3'UTR-CDS Intra-chr p22.1 p22.1 Seq+ 2076 ChimerSeq FusionScan TCGA_RNA-Seq UBE2J2-GNB1 UBE2J2 chr1 1203241 - GNB1 chr1 1736020 - Exonic hg19 BRCA TCGA-BH-A18T 7 Out-of-Frame Intra-chr p36.33 p36.33 Seq+ 2077 ChimerSeq FusionScan TCGA_RNA-Seq MYO5B-DYM MYO5B chr18 47721136 - DYM chr18 46645296 - Exonic hg19 BRCA TCGA-BH-A18T 5 In-Frame Intra-chr q21.1 q21.1 Seq+ 2078 ChimerSeq FusionScan TCGA_RNA-Seq C11orf80-BBS1 C11orf80 chr11 66526567 + BBS1 chr11 66294119 + Exonic hg19 BRCA TCGA-BH-A18T 3 In-Frame Intra-chr q13.2 q13.2 Seq+ 2079 ChimerSeq FusionScan TCGA_RNA-Seq PEX14-PGD PEX14 chr1 10535059 + PGD chr1 10459685 + Exonic hg19 BRCA TCGA-BH-A18T 3 Out-of-Frame Intra-chr p36.22 p36.22 Seq+ 2080 ChimerSeq FusionScan TCGA_RNA-Seq AGPAT6-KCNB2 AGPAT6 chr8 41435797 + KCNB2 chr8 73848169 + Exonic hg19 BRCA TCGA-BH-A18T 2 5'UTR-CDS Intra-chr q21.11 Seq+ 2081 ChimerSeq FusionScan TCGA_RNA-Seq NFE2L3-CBX3 NFE2L3 chr7 26192688 + CBX3 chr7 26245987 + Exonic hg19 BRCA TCGA-BH-A18T 2 In-Frame Intra-chr p15.2 Transcription factor p15.2 2082 ChimerSeq FusionScan TCGA_RNA-Seq MRPS35-PPFIBP1 MRPS35 chr12 27877119 + PPFIBP1 chr12 27829360 + Exonic hg19 BRCA TCGA-BH-A18T 2 In-Frame Intra-chr p11.22 p11.23 Seq+ 2083 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF11-ETV3 ARHGEF11 chr1 157014090 - ETV3 chr1 157106157 - Exonic hg19 BRCA TCGA-BH-A18T 2 CDS-5'UTR Intra-chr q23.1 q23.1 Transcription factor Seq+ 2084 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BRCA TCGA-BH-A18T 2 Out-of-Frame Intra-chr q22.2 q22.2 2085 ChimerSeq FusionScan TCGA_RNA-Seq SETD8-C12orf65 SETD8 chr12 123868755 + C12orf65 chr12 123741359 + Exonic hg19 BRCA TCGA-BH-A18T 2 Out-of-Frame Intra-chr q24.31 Seq+ 2086 ChimerSeq FusionScan TCGA_RNA-Seq PDE4B-GADD45A PDE4B chr1 66834652 + GADD45A chr1 68151707 + Exonic hg19 BRCA TCGA-BH-A18T 2 Out-of-Frame Intra-chr p31.3 p31.3 Tumor suppressor gene Seq+ 2087 ChimerSeq FusionScan TCGA_RNA-Seq SRGAP1-GAB2 SRGAP1 chr12 64480806 + GAB2 chr11 77991947 - Exonic hg19 BRCA TCGA-A8-A0A9 6 Out-of-Frame Inter-chr q14.2 q14.1 Seq+ 2088 ChimerSeq FusionScan TCGA_RNA-Seq PPM1H-SLC6A15 PPM1H chr12 63131281 - SLC6A15 chr12 85264449 - Exonic hg19 BRCA TCGA-A8-A0A9 5 In-Frame Intra-chr q14.2 q21.31 Seq+ 2089 ChimerSeq FusionScan TCGA_RNA-Seq RNF121-PPP6R3 RNF121 chr11 71701763 + PPP6R3 chr11 68331770 + Exonic hg19 BRCA TCGA-A8-A0A9 3 Out-of-Frame Intra-chr q13.4 q13.2 Seq+ 2090 ChimerSeq FusionScan TCGA_RNA-Seq ZNF207-C17orf75 ZNF207 chr17 30678931 + C17orf75 chr17 30661858 - Exonic hg19 BRCA TCGA-B6-A1KN 5 In-Frame Intra-chr q11.2 Transcription factor q11.2 Seq+ 2091 ChimerSeq FusionScan TCGA_RNA-Seq TATDN1-EEF1D TATDN1 chr8 125551265 - EEF1D chr8 144669022 - Exonic hg19 BRCA TCGA-B6-A1KN 2 Out-of-Frame Intra-chr q24.13 2092 ChimerSeq FusionScan TCGA_RNA-Seq ADRBK2-SF3A1 ADRBK2 chr22 26040632 + SF3A1 chr22 30749061 - Exonic hg19 BRCA TCGA-A2-A0T3 2 In-Frame Intra-chr q12.2 Seq+ 2093 ChimerSeq FusionScan TCGA_RNA-Seq RNF19A-COX6C RNF19A chr8 101322094 - COX6C chr8 100904280 - Exonic hg19 BRCA TCGA-AN-A0XV 6 5'UTR-5'UTR Intra-chr q22.2 q22.2 Seq+ 2094 ChimerSeq FusionScan TCGA_RNA-Seq TPD52-COPS5 TPD52 chr8 81083659 - COPS5 chr8 67971680 - Exonic hg19 BRCA TCGA-AN-A0XV 5 Out-of-Frame Intra-chr q21.13 q13.1 Seq+ 2095 ChimerSeq FusionScan TCGA_RNA-Seq PDE7A-NKAIN3 PDE7A chr8 66753605 - NKAIN3 chr8 63492097 + Exonic hg19 BRCA TCGA-AN-A0XV 4 In-Frame Intra-chr q13.1 q12.3 Seq+ 2096 ChimerSeq FusionScan TCGA_RNA-Seq MLLT4-KCNAB1 MLLT4 chr6 168227917 + KCNAB1 chr3 156232152 + Exonic hg19 BRCA TCGA-HN-A2NL 5 Out-of-Frame Inter-chr q25.31 Seq+ 2097 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB20-ULK4 ZBTB20 chr3 114693212 - ULK4 chr3 41746797 - Exonic hg19 BRCA TCGA-HN-A2NL 2 5'UTR-CDS Intra-chr q13.31 Transcription factor p22.1 Other:ULK 2098 ChimerSeq FusionScan TCGA_RNA-Seq PRKCD-CCDC159 PRKCD chr3 53215748 + CCDC159 chr19 11465255 + Exonic hg19 BRCA TCGA-A2-A3XV 2 In-Frame Inter-chr p21.1 Tumor suppressor gene p13.2 2099 ChimerSeq FusionScan TCGA_RNA-Seq ACOT7-FUCA1 ACOT7 chr1 6341161 - FUCA1 chr1 24181050 - Exonic hg19 BRCA TCGA-D8-A1XZ 4 In-Frame Intra-chr p36.31 p36.11 Seq+ 2100 ChimerSeq FusionScan TCGA_RNA-Seq PAK4-CATSPERG PAK4 chr19 39616559 + CATSPERG chr19 38848917 + Exonic hg19 BRCA TCGA-D8-A1XZ 3 5'UTR-CDS Intra-chr q13.2 STE:STE20 q13.2 Seq+ 2101 ChimerSeq FusionScan TCGA_RNA-Seq PDE7A-PREX2 PDE7A chr8 66647028 - PREX2 chr8 68950393 + Exonic hg19 BRCA TCGA-D8-A1XZ 2 In-Frame Intra-chr q13.1 q13.2 Seq+ 2102 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP35-COL22A1 ARHGAP35 chr19 47440665 + COL22A1 chr8 139793223 - Exonic hg19 BRCA TCGA-D8-A1XZ 2 Out-of-Frame Inter-chr q13.32 Transcription factor q24.3 Seq+ 2103 ChimerSeq FusionScan TCGA_RNA-Seq PAK4-CATSPERG PAK4 chr19 39616559 + CATSPERG chr19 38851128 + Exonic hg19 BRCA TCGA-D8-A1XZ 2 5'UTR-CDS Intra-chr q13.2 STE:STE20 q13.2 Seq+ 2104 ChimerSeq FusionScan TCGA_RNA-Seq SRRM1-C1orf135 SRRM1 chr1 24981620 + C1orf135 chr1 26164045 - Exonic hg19 BRCA TCGA-D8-A1XZ 2 Out-of-Frame Intra-chr p36.11 Seq+ 2105 ChimerSeq FusionScan TCGA_RNA-Seq TRAM1-DYNLT1 TRAM1 chr8 71520311 - DYNLT1 chr6 159058926 - Exonic hg19 BRCA TCGA-D8-A1XZ 2 In-Frame Inter-chr q13.3 q25.3 2106 ChimerSeq FusionScan TCGA_RNA-Seq FAM172A-EFNA5 FAM172A chr5 93447215 - EFNA5 chr5 106763210 - Exonic hg19 BRCA TCGA-D8-A1XZ 2 5'UTR-CDS Intra-chr q15 Tumor suppressor gene q21.3 Tumor suppressor gene Seq+ 2107 ChimerSeq FusionScan TCGA_RNA-Seq PAK4-CATSPERG PAK4 chr19 39616559 + CATSPERG chr19 38860798 + Exonic hg19 BRCA TCGA-D8-A1XZ 2 5'UTR-CDS Intra-chr q13.2 STE:STE20 q13.2 Seq+ 2108 ChimerSeq FusionScan TCGA_RNA-Seq CDH1-CIRH1A CDH1 chr16 68835796 + CIRH1A chr16 69170598 + Exonic hg19 BRCA TCGA-A7-A6VX 6 In-Frame Intra-chr q22.1 Oncogene Tumor suppressor gene 2109 ChimerSeq FusionScan TCGA_RNA-Seq DIP2A-PRR4 DIP2A chr21 47910632 + PRR4 chr12 11001006 - Exonic hg19 BRCA TCGA-AO-A0J2 8 In-Frame Inter-chr q22.3 Seq+ 2110 ChimerSeq FusionScan TCGA_RNA-Seq ITPKB-ZC3HAV1 ITPKB chr1 226923227 - ZC3HAV1 chr7 138749745 - Exonic hg19 BRCA TCGA-AO-A0J2 4 In-Frame Inter-chr q42.12 q34 Seq+ 2111 ChimerSeq FusionScan TCGA_RNA-Seq ZNF292-FIG4 ZNF292 chr6 87865477 + FIG4 chr6 110106172 + Exonic hg19 BRCA TCGA-AO-A0J2 2 Out-of-Frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q21 Seq+ 2112 ChimerSeq FusionScan TCGA_RNA-Seq ZC3HAV1-ITPKB ZC3HAV1 chr7 138749624 - ITPKB chr1 226836472 - Exonic hg19 BRCA TCGA-AO-A0J2 2 Out-of-Frame Inter-chr q34 q42.12 Seq+ 2113 ChimerSeq FusionScan TCGA_RNA-Seq ZNF292-FIG4 ZNF292 chr6 87865477 + FIG4 chr6 110098124 + Exonic hg19 BRCA TCGA-AO-A0J2 2 Out-of-Frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q21 Seq+ 2114 ChimerSeq FusionScan TCGA_RNA-Seq ZNF292-FIG4 ZNF292 chr6 87865477 + FIG4 chr6 110113784 + Exonic hg19 BRCA TCGA-AO-A0J2 2 In-Frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q21 Seq+ 2115 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BRCA TCGA-AO-A0J2 2 Out-of-Frame Intra-chr q22.2 q22.2 2116 ChimerSeq FusionScan TCGA_RNA-Seq B4GALNT3-CCDC77 B4GALNT3 chr12 569711 + CCDC77 chr12 527659 + Exonic hg19 BRCA TCGA-AO-A0J2 2 Out-of-Frame Intra-chr p13.33 p13.33 Seq+ 2117 ChimerSeq FusionScan TCGA_RNA-Seq LIMS1-C2orf76 LIMS1 chr2 109151050 + C2orf76 chr2 120097547 - Exonic hg19 BRCA TCGA-BH-A0B0 2 CDS-5'UTR Intra-chr q12.3 q14.2 2118 ChimerSeq FusionScan TCGA_RNA-Seq CTTN-BCAR4 CTTN chr11 70256066 + BCAR4 chr16 11914154 - Exonic hg19 BRCA TCGA-B6-A40B 10 CDS-3'UTR Inter-chr q13.3 p13.13 Seq+ 2119 ChimerSeq FusionScan TCGA_RNA-Seq CTTN-BCAR4 CTTN chr11 70256066 + BCAR4 chr16 11915612 - Exonic hg19 BRCA TCGA-B6-A40B 6 CDS-3'UTR Inter-chr q13.3 p13.13 Seq+ 2120 ChimerSeq FusionScan TCGA_RNA-Seq TM6SF2-RPS5 TM6SF2 chr19 19383929 - RPS5 chr19 58905863 + Exonic hg19 BRCA TCGA-B6-A40B 3 CDS-5'UTR Intra-chr p13.11 q13.43 2121 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-B6-A40B 2 5'UTR-5'UTR Inter-chr p13.2 p22 2122 ChimerSeq FusionScan TCGA_RNA-Seq UHRF1-ACTA2 UHRF1 chr19 4911050 + ACTA2 chr10 90707143 - Exonic hg19 BRCA TCGA-E2-A106 5 In-Frame Inter-chr p13.3 q23.31 Seq+ 2123 ChimerSeq FusionScan TCGA_RNA-Seq KCNMA1-RFX2 KCNMA1 chr10 79397022 - RFX2 chr19 6047515 - Exonic hg19 BRCA TCGA-E2-A106 2 CDS-5'UTR Inter-chr q22.3 p13.3 Transcription factor Seq+ 2124 ChimerSeq FusionScan TCGA_RNA-Seq C10orf57-CREB3L3 C10orf57 chr10 81841960 + CREB3L3 chr19 4170136 + Exonic hg19 BRCA TCGA-E2-A106 2 In-Frame Inter-chr p13.3 Transcription factor Seq+ 2125 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KA1-RASGRP3 RPS6KA1 chr1 26863460 + RASGRP3 chr2 33759389 + Exonic hg19 BRCA TCGA-E2-A106 2 In-Frame Inter-chr p22.3 Seq+ 2126 ChimerSeq FusionScan TCGA_RNA-Seq GATA3-TAF3 GATA3 chr10 8111561 + TAF3 chr10 8055693 + Exonic hg19 BRCA TCGA-AR-A1AP 5 In-Frame Intra-chr p14 Oncogene Transcription factor p14 Seq+ 2127 ChimerSeq FusionScan TCGA_RNA-Seq CLNS1A-TRIM49L2 CLNS1A chr11 77348634 - TRIM49L2 chr11 89765564 + Exonic hg19 BRCA TCGA-AR-A1AP 2 CDS-5'UTR Intra-chr q14.1 2128 ChimerSeq FusionScan TCGA_RNA-Seq MAML3-ACBD3 MAML3 chr4 140810510 - ACBD3 chr1 226347059 - Exonic hg19 BRCA TCGA-AR-A1AP 2 Out-of-Frame Inter-chr q31.1 q42.12 2129 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-A7-A425 2 5'UTR-5'UTR Inter-chr p13.2 p22 2130 ChimerSeq FusionScan TCGA_RNA-Seq C19orf25-MED1 C19orf25 chr19 1478772 - MED1 chr17 37604157 - Exonic hg19 BRCA TCGA-A2-A0EY 6 In-Frame Inter-chr p13.3 q12 Tumor suppressor gene Seq+ 2131 ChimerSeq FusionScan TCGA_RNA-Seq SPECC1-TMEM11 SPECC1 chr17 20059549 + TMEM11 chr17 21102153 - Exonic hg19 BRCA TCGA-A2-A0EY 3 Out-of-Frame Intra-chr p11.2 p11.2 Seq+ 2132 ChimerSeq FusionScan TCGA_RNA-Seq POLR3K-SNRNP25 POLR3K chr16 101557 - SNRNP25 chr16 105458 + Exonic hg19 BRCA TCGA-A2-A0EY 3 Out-of-Frame Intra-chr p13.3 p13.3 2133 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 BRCA TCGA-A2-A0EY 2 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 2134 ChimerSeq FusionScan TCGA_RNA-Seq SMG1-ANO3 SMG1 chr16 18869491 - ANO3 chr11 26669255 + Exonic hg19 BRCA TCGA-A2-A0EY 2 In-Frame Inter-chr p12.3 Atypical:PIKK p14.2 Seq+ 2135 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC7-FAM74A1 ZCCHC7 chr9 37327831 + FAM74A1 chr9 39906142 + Exonic hg19 BRCA TCGA-A2-A0EY 2 CDS-5'UTR Intra-chr p13.2 p12 2136 ChimerSeq FusionScan TCGA_RNA-Seq GAB2-CHKA GAB2 chr11 78128691 - CHKA chr11 67821514 - Exonic hg19 BRCA TCGA-3C-AAAU 2 In-Frame Intra-chr q14.1 q13.2 Seq+ 2137 ChimerSeq FusionScan TCGA_RNA-Seq MDM2-NUP107 MDM2 chr12 69229764 + NUP107 chr12 69113120 + Exonic hg19 BRCA TCGA-3C-AAAU 2 In-Frame Intra-chr q15 Oncogene q15 Seq+ 2138 ChimerSeq FusionScan TCGA_RNA-Seq RNF121-SF1 RNF121 chr11 71640170 + SF1 chr11 64544098 - Exonic hg19 BRCA TCGA-E2-A576 2 Out-of-Frame Intra-chr q13.4 q13.1 Seq+ 2139 ChimerSeq FusionScan TCGA_RNA-Seq NUDCD1-FRA10AC1 NUDCD1 chr8 110283233 - FRA10AC1 chr10 95441355 - Exonic hg19 BRCA TCGA-E2-A576 2 Out-of-Frame Inter-chr q23.1 q23.33 2140 ChimerSeq FusionScan TCGA_RNA-Seq LINC00340-RIT2 LINC00340 chr6 22020771 + RIT2 chr18 40323685 - Exonic hg19 BRCA TCGA-AC-A23C 12 5'UTR-CDS Inter-chr q12.3 2141 ChimerSeq FusionScan TCGA_RNA-Seq RAB27B-PXDC1 RAB27B chr18 52495931 + PXDC1 chr6 3727896 - Exonic hg19 BRCA TCGA-AC-A23C 7 5'UTR-CDS Inter-chr q21.2 p25.2 Seq+ 2142 ChimerSeq FusionScan TCGA_RNA-Seq LINC00340-RIT2 LINC00340 chr6 21979291 + RIT2 chr18 40323685 - Exonic hg19 BRCA TCGA-AC-A23C 3 5'UTR-CDS Inter-chr q12.3 2143 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-AC-A23C 2 5'UTR-5'UTR Inter-chr p13.2 p22 2144 ChimerSeq FusionScan TCGA_RNA-Seq MED1-CAP2 MED1 chr17 37595417 - CAP2 chr6 17539499 + Exonic hg19 BRCA TCGA-AC-A23C 2 Out-of-Frame Inter-chr q12 Tumor suppressor gene p22.3 Seq+ 2145 ChimerSeq FusionScan TCGA_RNA-Seq CCDC144A-PPM1E CCDC144A chr17 16638957 + PPM1E chr17 57033009 + Exonic hg19 BRCA TCGA-OL-A5RZ 3 Out-of-Frame Intra-chr p11.2 q22 Seq+ 2146 ChimerSeq FusionScan TCGA_RNA-Seq SCMH1-GPBP1L1 SCMH1 chr1 41707730 - GPBP1L1 chr1 46099908 - Exonic hg19 BRCA TCGA-OL-A5RZ 3 5'UTR-CDS Intra-chr p34.2 Transcription factor p34.1 Transcription factor Seq+ 2147 ChimerSeq FusionScan TCGA_RNA-Seq SPAG5-SLC47A1 SPAG5 chr17 26912881 - SLC47A1 chr17 19445705 + Exonic hg19 BRCA TCGA-OL-A5RZ 3 In-Frame Intra-chr q11.2 p11.2 Seq+ 2148 ChimerSeq FusionScan TCGA_RNA-Seq RNH1-PNPLA6 RNH1 chr11 507112 - PNPLA6 chr19 7607446 + Exonic hg19 BRCA TCGA-OL-A5RZ 2 5'UTR-CDS Inter-chr Tumor suppressor gene p13.2 2149 ChimerSeq FusionScan TCGA_RNA-Seq HIVEP3-NFIA HIVEP3 chr1 42384083 - NFIA chr1 61818121 + Exonic hg19 BRCA TCGA-OL-A5RZ 2 5'UTR-CDS Intra-chr p34.2 Tumor suppressor gene Transcription factor p31.3 Transcription factor 2150 ChimerSeq FusionScan TCGA_RNA-Seq PDK3-NKAP PDK3 chrX 24537127 + NKAP chrX 119059357 - Exonic hg19 BRCA TCGA-OL-A5RZ 2 Out-of-Frame Intra-chr p22.11 q24 2151 ChimerSeq FusionScan TCGA_RNA-Seq TOM1L1-TMEM11 TOM1L1 chr17 53027487 + TMEM11 chr17 21102153 - Exonic hg19 BRCA TCGA-OL-A5RZ 2 In-Frame Intra-chr q22 p11.2 Seq+ 2152 ChimerSeq FusionScan TCGA_RNA-Seq STARD3-GNAI3 STARD3 chr17 37793484 + GNAI3 chr1 110116358 + Exonic hg19 BRCA TCGA-OL-A5RZ 2 5'UTR-CDS Inter-chr q12 p13.3 2153 ChimerSeq FusionScan TCGA_RNA-Seq CTPS2-RBBP7 CTPS2 chrX 16716358 - RBBP7 chrX 16871965 - Exonic hg19 BRCA TCGA-A2-A0T7 6 In-Frame Intra-chr p22.2 p22.2 Tumor suppressor gene Seq+ 2154 ChimerSeq FusionScan TCGA_RNA-Seq COL4A5-RGAG1 COL4A5 chrX 107683436 + RGAG1 chrX 109688380 + Exonic hg19 BRCA TCGA-A8-A085 5 CDS-5'UTR Intra-chr q22.3 Seq+ 2155 ChimerSeq FusionScan TCGA_RNA-Seq COL4A5-RGAG1 COL4A5 chrX 107683436 + RGAG1 chrX 109693794 + Exonic hg19 BRCA TCGA-A8-A085 5 CDS-5'UTR Intra-chr q22.3 Seq+ 2156 ChimerSeq FusionScan TCGA_RNA-Seq RSPRY1-FAM192A RSPRY1 chr16 57220363 + FAM192A chr16 57207781 - Exonic hg19 BRCA TCGA-AR-A0TU 2 5'UTR-5'UTR Intra-chr q13 q13 2157 ChimerSeq FusionScan TCGA_RNA-Seq MYO10-NPR3 MYO10 chr5 16877717 - NPR3 chr5 32724803 + Exonic hg19 BRCA TCGA-AR-A0TU 2 Out-of-Frame Intra-chr p15.1 p13.3 Seq+ 2158 ChimerSeq FusionScan TCGA_RNA-Seq ANO6-IAPP ANO6 chr12 45816845 + IAPP chr12 21531170 + Exonic hg19 BRCA TCGA-E2-A1L8 5 Out-of-Frame Intra-chr q12 p12.1 Seq+ 2159 ChimerSeq FusionScan TCGA_RNA-Seq USP12-RASL11A USP12 chr13 27745728 - RASL11A chr13 27845620 + Exonic hg19 BRCA TCGA-A2-A0CR 2 Out-of-Frame Intra-chr q12.13 Tumor suppressor gene q12.2 Tumor suppressor gene 2160 ChimerSeq FusionScan TCGA_RNA-Seq TBCD-SLC9A3R1 TBCD chr17 80847573 + SLC9A3R1 chr17 72758150 + Exonic hg19 BRCA TCGA-A7-A26G 9 In-Frame Intra-chr q25.1 Tumor suppressor gene Seq+ 2161 ChimerSeq FusionScan TCGA_RNA-Seq CCM2-PPIA CCM2 chr7 45078025 + PPIA chr7 44838845 + Exonic hg19 BRCA TCGA-A7-A26G 8 In-Frame Intra-chr p13 p13 Seq+ 2162 ChimerSeq FusionScan TCGA_RNA-Seq SMAD3-DIS3L SMAD3 chr15 67358698 + DIS3L chr15 66604061 + Exonic hg19 BRCA TCGA-A7-A26G 4 Out-of-Frame Intra-chr q22.33 Transcription factor q22.31 Seq+ 2163 ChimerSeq FusionScan TCGA_RNA-Seq MSH2-TTC7A MSH2 chr2 47641557 + TTC7A chr2 47233060 + Exonic hg19 BRCA TCGA-A7-A26G 4 In-Frame Intra-chr p21 Oncogene Tumor suppressor gene p21 Seq+ 2164 ChimerSeq FusionScan TCGA_RNA-Seq NSD1-ZNF346 NSD1 chr5 176563031 + ZNF346 chr5 176468126 + Exonic hg19 BRCA TCGA-A7-A26G 3 Out-of-Frame Intra-chr q35.3 Oncogene q35.2 Transcription factor Seq+ 2165 ChimerSeq FusionScan TCGA_RNA-Seq GMEB1-TRNAU1AP GMEB1 chr1 28995351 + TRNAU1AP chr1 28897687 + Exonic hg19 BRCA TCGA-A7-A26G 2 5'UTR-5'UTR Intra-chr p35.3 Transcription factor p35.3 Seq+ 2166 ChimerSeq FusionScan TCGA_RNA-Seq TLL2-PIK3AP1 TLL2 chr10 98273267 - PIK3AP1 chr10 98469740 - Exonic hg19 BRCA TCGA-A7-A26G 2 In-Frame Intra-chr q24.1 q24.1 Seq+ 2167 ChimerSeq FusionScan TCGA_RNA-Seq RIC8B-RFX4 RIC8B chr12 107245372 + RFX4 chr12 107033109 + Exonic hg19 BRCA TCGA-A7-A26G 2 In-Frame Intra-chr q23.3 q23.3 Transcription factor Seq+ 2168 ChimerSeq FusionScan TCGA_RNA-Seq PBRM1-TKT PBRM1 chr3 52692214 - TKT chr3 53276258 - Exonic hg19 BRCA TCGA-A7-A26G 2 Out-of-Frame Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 Tumor suppressor gene Seq+ 2169 ChimerSeq FusionScan TCGA_RNA-Seq SKAP1-ABCC11 SKAP1 chr17 46423266 - ABCC11 chr16 48209328 - Exonic hg19 BRCA TCGA-BH-A0C3 4 In-Frame Inter-chr q21.32 q12.1 Seq+ 2170 ChimerSeq FusionScan TCGA_RNA-Seq PRUNE-SRGAP2P2 PRUNE chr1 150990380 + SRGAP2P2 chr1 144094361 + Exonic hg19 BRCA TCGA-BH-A0C3 3 CDS-5'UTR Intra-chr 2171 ChimerSeq FusionScan TCGA_RNA-Seq PPFIA1-LRP5 PPFIA1 chr11 70222706 + LRP5 chr11 68178903 + Exonic hg19 BRCA TCGA-BH-A0C3 2 Out-of-Frame Intra-chr q13.3 q13.2 Seq+ 2172 ChimerSeq FusionScan TCGA_RNA-Seq MAP7-ECHDC1 MAP7 chr6 136871479 - ECHDC1 chr6 127611422 - Exonic hg19 BRCA TCGA-A2-A04V 6 Out-of-Frame Intra-chr q23.3 q22.33 Seq+ 2173 ChimerSeq FusionScan TCGA_RNA-Seq PDGFRA-UBAP2L PDGFRA chr4 55095582 + UBAP2L chr1 154238976 + Exonic hg19 BRCA TCGA-E2-A14U 2 5'UTR-CDS Inter-chr q12 Oncogene q21.3 2174 ChimerSeq FusionScan TCGA_RNA-Seq AKAP1-PITPNC1 AKAP1 chr17 55162759 + PITPNC1 chr17 65574301 + Exonic hg19 BRCA TCGA-E2-A14V 11 5'UTR-CDS Intra-chr q22 q24.2 Seq+ 2175 ChimerSeq FusionScan TCGA_RNA-Seq SYNCRIP-CDK19 SYNCRIP chr6 86352514 - CDK19 chr6 111067404 - Exonic hg19 BRCA TCGA-E2-A14V 5 5'UTR-CDS Intra-chr q14.3 q21 Seq+ 2176 ChimerSeq FusionScan TCGA_RNA-Seq PPM1D-TRIM37 PPM1D chr17 58711338 + TRIM37 chr17 57060282 - Exonic hg19 BRCA TCGA-E2-A14V 4 Out-of-Frame Intra-chr q23.2 q22 Seq+ 2177 ChimerSeq FusionScan TCGA_RNA-Seq BPTF-FAM117A BPTF chr17 65962772 + FAM117A chr17 47797798 - Exonic hg19 BRCA TCGA-E2-A14V 2 Out-of-Frame Intra-chr q24.2 Transcription factor q21.33 Seq+ 2178 ChimerSeq FusionScan TCGA_RNA-Seq SPOP-TAOK1 SPOP chr17 47679226 - TAOK1 chr17 27869578 + Exonic hg19 BRCA TCGA-E2-A14V 2 Out-of-Frame Intra-chr q21.33 Oncogene Tumor suppressor gene q11.2 Seq+ 2179 ChimerSeq FusionScan TCGA_RNA-Seq PTRH2-MRGPRD PTRH2 chr17 57784731 - MRGPRD chr11 68748455 - Exonic hg19 BRCA TCGA-E2-A14V 2 5'UTR-5'UTR Inter-chr q23.1 q13.3 Seq+ 2180 ChimerSeq FusionScan TCGA_RNA-Seq BPTF-NSF BPTF chr17 65822453 + NSF chr17 44751779 + Exonic hg19 BRCA TCGA-AR-A0TV 2 In-Frame Intra-chr q24.2 Transcription factor 2181 ChimerSeq FusionScan TCGA_RNA-Seq HECTD1-PRPF39 HECTD1 chr14 31675002 - PRPF39 chr14 45564423 + Exonic hg19 BRCA TCGA-AR-A0TV 2 CDS-5'UTR Intra-chr q12 q21.2 Seq+ 2182 ChimerSeq FusionScan TCGA_RNA-Seq AGAP1-WDR11 AGAP1 chr2 236403493 + WDR11 chr10 122659540 + Exonic hg19 BRCA TCGA-A8-A08O 3 In-Frame Inter-chr q37.2 q26.12 Tumor suppressor gene Seq+ 2183 ChimerSeq FusionScan TCGA_RNA-Seq MMD-PRKCA MMD chr17 53499030 - PRKCA chr17 64728805 + Exonic hg19 BRCA TCGA-A8-A08O 2 Out-of-Frame Intra-chr q22 q24.2 Seq+ 2184 ChimerSeq FusionScan TCGA_RNA-Seq IFT172-CAPN2 IFT172 chr2 27700083 - CAPN2 chr1 223946971 + Exonic hg19 BRCA TCGA-BH-A18G 2 Out-of-Frame Inter-chr p23.3 q41 2185 ChimerSeq FusionScan TCGA_RNA-Seq HDAC7-ECH1 HDAC7 chr12 48213549 - ECH1 chr19 39308215 - Exonic hg19 BRCA TCGA-BH-A18G 2 In-Frame Inter-chr q13.11 2186 ChimerSeq FusionScan TCGA_RNA-Seq TCF12-BPGM TCF12 chr15 57213296 + BPGM chr7 134363604 + Exonic hg19 BRCA TCGA-E2-A1IJ 2 In-Frame Inter-chr q21.3 Oncogene Transcription factor q33 2187 ChimerSeq FusionScan TCGA_RNA-Seq BRSK1-HSPBP1 BRSK1 chr19 55795946 + HSPBP1 chr19 55777654 - Exonic hg19 BRCA TCGA-AO-A03V 4 In-Frame Intra-chr q13.42 CAMK:CAMKL Tumor suppressor gene q13.42 Seq+ 2188 ChimerSeq FusionScan TCGA_RNA-Seq PPP6R1-AURKC PPP6R1 chr19 55769802 - AURKC chr19 57743400 + Exonic hg19 BRCA TCGA-AO-A03V 4 5'UTR-CDS Intra-chr q13.42 q13.43 Oncogene Seq+ 2189 ChimerSeq FusionScan TCGA_RNA-Seq TSPAN9-CACNA1C TSPAN9 chr12 3310422 + CACNA1C chr12 2773990 + Exonic hg19 BRCA TCGA-AO-A03V 3 Out-of-Frame Intra-chr p13.33 p13.33 Seq+ 2190 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHA1-FAM187B PLEKHA1 chr10 124134322 + FAM187B chr19 35716115 - Exonic hg19 BRCA TCGA-AO-A03V 3 5'UTR-CDS Inter-chr q26.13 q13.12 Seq+ 2191 ChimerSeq FusionScan TCGA_RNA-Seq DNAJB12-SLC25A16 DNAJB12 chr10 74114522 - SLC25A16 chr10 70266475 - Exonic hg19 BRCA TCGA-AO-A03V 3 In-Frame Intra-chr q22.1 q21.3 Seq+ 2192 ChimerSeq FusionScan TCGA_RNA-Seq ZNF586-SRC ZNF586 chr19 58288037 + SRC chr20 36028517 + Exonic hg19 BRCA TCGA-AO-A03V 2 In-Frame Inter-chr q13.43 Transcription factor q11.23 TK:Src Oncogene Seq+ 2193 ChimerSeq FusionScan TCGA_RNA-Seq SGMS1-PARG SGMS1 chr10 52193235 - PARG chr10 51093341 - Exonic hg19 BRCA TCGA-AO-A03V 2 5'UTR-CDS Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 2194 ChimerSeq FusionScan TCGA_RNA-Seq UNC13B-DNER UNC13B chr9 35162302 + DNER chr2 230282946 - Exonic hg19 BRCA TCGA-AO-A03V 2 In-Frame Inter-chr p13.3 q36.3 Seq+ 2195 ChimerSeq FusionScan TCGA_RNA-Seq SLTM-ATE1 SLTM chr15 59204761 - ATE1 chr10 123503373 - Exonic hg19 BRCA TCGA-AO-A03V 2 Out-of-Frame Inter-chr q22.1 q26.13 Seq+ 2196 ChimerSeq FusionScan TCGA_RNA-Seq ATP13A3-LRRC15 ATP13A3 chr3 194146070 - LRRC15 chr3 194081775 - Exonic hg19 BRCA TCGA-A2-A0ET 2 Out-of-Frame Intra-chr q29 q29 Seq+ 2197 ChimerSeq FusionScan TCGA_RNA-Seq BMPR1B-MCC BMPR1B chr4 95917285 + MCC chr5 112406931 - Exonic hg19 BRCA TCGA-A2-A0ET 2 5'UTR-CDS Inter-chr q22.3 TKL:STKR q22.2 Tumor suppressor gene Seq+ 2198 ChimerSeq FusionScan TCGA_RNA-Seq RSF1-PSMA4 RSF1 chr11 77451775 - PSMA4 chr15 78837210 + Exonic hg19 BRCA TCGA-BH-A0AZ 2 In-Frame Inter-chr q14.1 q25.1 2199 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-CDK12 ERBB2 chr17 37868701 + CDK12 chr17 37680926 + Exonic hg19 BRCA TCGA-BH-A204 2 In-Frame Intra-chr q12 Oncogene q12 Oncogene Seq+ 2200 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-NARS2 ERBB2 chr17 37866734 + NARS2 chr11 78147860 - Exonic hg19 BRCA TCGA-BH-A1EN 12 Out-of-Frame Inter-chr q12 Oncogene q14.1 Seq+ 2201 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-NARS2 ERBB2 chr17 37866134 + NARS2 chr11 78147860 - Exonic hg19 BRCA TCGA-BH-A1EN 8 Out-of-Frame Inter-chr q12 Oncogene q14.1 Seq+ 2202 ChimerSeq FusionScan TCGA_RNA-Seq EXT1-RSF1 EXT1 chr8 118825110 - RSF1 chr11 77451981 - Exonic hg19 BRCA TCGA-BH-A1EN 4 In-Frame Inter-chr q24.11 Oncogene Tumor suppressor gene q14.1 Seq+ 2203 ChimerSeq FusionScan TCGA_RNA-Seq KCTD21-ODZ4 KCTD21 chr11 77899618 - ODZ4 chr11 78776052 - Exonic hg19 BRCA TCGA-BH-A1EN 3 5'UTR-CDS Intra-chr q14.1 2204 ChimerSeq FusionScan TCGA_RNA-Seq ODZ4-RBM4 ODZ4 chr11 78775782 - RBM4 chr11 66433326 + Exonic hg19 BRCA TCGA-BH-A1EN 2 In-Frame Intra-chr q13.2 Tumor suppressor gene Seq+ 2205 ChimerSeq FusionScan TCGA_RNA-Seq GAB2-ALG8 GAB2 chr11 78128691 - ALG8 chr11 77838482 - Exonic hg19 BRCA TCGA-BH-A1EN 2 Out-of-Frame Intra-chr q14.1 q14.1 Seq+ 2206 ChimerSeq FusionScan TCGA_RNA-Seq OXNAD1-LRRTM4 OXNAD1 chr3 16327955 + LRRTM4 chr2 76976042 - Exonic hg19 BRCA TCGA-AR-A0TZ 2 Out-of-Frame Inter-chr p25.1 p12 Seq+ 2207 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1L1-SNX20 WHSC1L1 chr8 38239316 - SNX20 chr16 50711446 - Exonic hg19 BRCA TCGA-BH-A1FB 4 5'UTR-5'UTR Inter-chr p11.23 Tumor suppressor gene q12.1 Seq+ 2208 ChimerSeq FusionScan TCGA_RNA-Seq ACP6-RELL1 ACP6 chr1 147120047 - RELL1 chr4 37640126 - Exonic hg19 BRCA TCGA-BH-A1FB 2 Out-of-Frame Inter-chr q21.2 p14 2209 ChimerSeq FusionScan TCGA_RNA-Seq ARID4B-PHOSPHO2 ARID4B chr1 235341114 - PHOSPHO2 chr2 170557455 + Exonic hg19 BRCA TCGA-BH-A1FB 2 CDS-5'UTR Inter-chr q42.3 q31.1 2210 ChimerSeq FusionScan TCGA_RNA-Seq PRKAA1-RPL37 PRKAA1 chr5 40798164 - RPL37 chr5 40834708 - Exonic hg19 BRCA TCGA-B6-A0RS 9 Out-of-Frame Intra-chr p13.1 Tumor suppressor gene p13.1 Seq+ 2211 ChimerSeq FusionScan TCGA_RNA-Seq SHANK2-ANXA13 SHANK2 chr11 70935742 - ANXA13 chr8 124724993 - Exonic hg19 BRCA TCGA-B6-A0RS 5 5'UTR-CDS Inter-chr q13.4 q24.13 Seq+ 2212 ChimerSeq FusionScan TCGA_RNA-Seq SHANK2-ANXA13 SHANK2 chr11 70935742 - ANXA13 chr8 124714976 - Exonic hg19 BRCA TCGA-B6-A0RS 4 5'UTR-CDS Inter-chr q13.4 q24.13 Seq+ 2213 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R5C-UPF2 PPP2R5C chr14 102252520 + UPF2 chr10 12001355 - Exonic hg19 BRCA TCGA-B6-A0RS 4 Out-of-Frame Inter-chr q32.31 Tumor suppressor gene p14 Seq+ 2214 ChimerSeq FusionScan TCGA_RNA-Seq UPF2-PPP2R5C UPF2 chr10 11984663 - PPP2R5C chr14 102252354 + Exonic hg19 BRCA TCGA-B6-A0RS 2 In-Frame Inter-chr p14 q32.31 Tumor suppressor gene Seq+ 2215 ChimerSeq FusionScan TCGA_RNA-Seq SHANK2-ANXA13 SHANK2 chr11 70935742 - ANXA13 chr8 124748117 - Exonic hg19 BRCA TCGA-B6-A0RS 2 5'UTR-CDS Inter-chr q13.4 q24.13 Seq+ 2216 ChimerSeq FusionScan TCGA_RNA-Seq ELL-C19orf42 ELL chr19 18632730 - C19orf42 chr19 16758072 - Exonic hg19 BRCA TCGA-A2-A04U 6 Out-of-Frame Intra-chr p13.11 Seq+ 2217 ChimerSeq FusionScan TCGA_RNA-Seq MSH2-SLC3A1 MSH2 chr2 47637511 + SLC3A1 chr2 44539724 + Exonic hg19 BRCA TCGA-A2-A04U 4 In-Frame Intra-chr p21 Oncogene Tumor suppressor gene p21 Seq+ 2218 ChimerSeq FusionScan TCGA_RNA-Seq FAM3C-CADPS2 FAM3C chr7 121036215 - CADPS2 chr7 121965635 - Exonic hg19 BRCA TCGA-A2-A04U 3 5'UTR-CDS Intra-chr q31.31 q31.32 Seq+ 2219 ChimerSeq FusionScan TCGA_RNA-Seq MDH1-COMMD1 MDH1 chr2 63821720 + COMMD1 chr2 62227835 + Exonic hg19 BRCA TCGA-A2-A04U 3 In-Frame Intra-chr p15 p15 Seq+ 2220 ChimerSeq FusionScan TCGA_RNA-Seq LSM14A-FXYD3 LSM14A chr19 34706566 + FXYD3 chr19 35610071 + Exonic hg19 BRCA TCGA-A2-A04U 2 In-Frame Intra-chr q13.12 Seq+ 2221 ChimerSeq FusionScan TCGA_RNA-Seq DOCK1-PPAPDC1A DOCK1 chr10 128796513 + PPAPDC1A chr10 122263329 + Exonic hg19 BRCA TCGA-A2-A04U 2 In-Frame Intra-chr q26.2 Seq+ 2222 ChimerSeq FusionScan TCGA_RNA-Seq INSIG1-DPP6 INSIG1 chr7 155094556 + DPP6 chr7 154263926 + Exonic hg19 BRCA TCGA-A2-A04U 2 In-Frame Intra-chr q36.3 Seq+ 2223 ChimerSeq FusionScan TCGA_RNA-Seq TRAPPC9-TSTA3 TRAPPC9 chr8 140898122 - TSTA3 chr8 144697085 - Exonic hg19 BRCA TCGA-A2-A04U 2 Out-of-Frame Intra-chr q24.3 Seq+ 2224 ChimerSeq FusionScan TCGA_RNA-Seq KPNA1-GOLGB1 KPNA1 chr3 122215283 - GOLGB1 chr3 121388202 - Exonic hg19 BRCA TCGA-A2-A04U 2 In-Frame Intra-chr q21.1 q13.33 Seq+ 2225 ChimerSeq FusionScan TCGA_RNA-Seq CDH1-CCDC132 CDH1 chr16 68857529 + CCDC132 chr7 92952922 + Exonic hg19 BRCA TCGA-AO-A12E 7 In-Frame Inter-chr q22.1 Oncogene Tumor suppressor gene Seq+ 2226 ChimerSeq FusionScan TCGA_RNA-Seq GALNT11-PRKAG2 GALNT11 chr7 151810483 + PRKAG2 chr7 151262971 - Exonic hg19 BRCA TCGA-AO-A12E 5 In-Frame Intra-chr q36.1 q36.1 Seq+ 2227 ChimerSeq FusionScan TCGA_RNA-Seq CCDC132-CDH1 CCDC132 chr7 92940584 + CDH1 chr16 68862076 + Exonic hg19 BRCA TCGA-AO-A12E 2 In-Frame Inter-chr q22.1 Oncogene Tumor suppressor gene Seq+ 2228 ChimerSeq FusionScan TCGA_RNA-Seq ZNF738-CHMP1A ZNF738 chr19 21558766 + CHMP1A chr16 89713739 - Exonic hg19 BRCA TCGA-BH-A28O 2 5'UTR-CDS Inter-chr p12 q24.3 Seq+ 2229 ChimerSeq FusionScan TCGA_RNA-Seq NEMF-CDKL1 NEMF chr14 50295008 - CDKL1 chr14 50808940 - Exonic hg19 BRCA TCGA-E9-A1N9 3 In-Frame Intra-chr q21.3 q22.1 CMGC:CDKL Seq+ 2230 ChimerSeq FusionScan TCGA_RNA-Seq ERLIN2-RAB11FIP1 ERLIN2 chr8 37602214 + RAB11FIP1 chr8 37735069 - Exonic hg19 BRCA TCGA-E9-A1N9 2 Out-of-Frame Intra-chr p11.23 p11.23 Seq+ 2231 ChimerSeq FusionScan TCGA_RNA-Seq NUP188-ASTN2 NUP188 chr9 131735528 + ASTN2 chr9 119382722 - Exonic hg19 BRCA TCGA-E9-A1N9 2 In-Frame Intra-chr q34.11 q33.1 Seq+ 2232 ChimerSeq FusionScan TCGA_RNA-Seq SSH2-UST SSH2 chr17 28256955 - UST chr6 149262414 + Exonic hg19 BRCA TCGA-BH-A1EV 4 In-Frame Inter-chr q11.2 q25.1 Seq+ 2233 ChimerSeq FusionScan TCGA_RNA-Seq TMBIM4-INO80 TMBIM4 chr12 66563634 - INO80 chr15 41297885 - Exonic hg19 BRCA TCGA-BH-A1EV 3 Out-of-Frame Inter-chr q14.3 q15.1 Seq+ 2234 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-OSBPL8 FRS2 chr12 69924740 + OSBPL8 chr12 76750508 - Exonic hg19 BRCA TCGA-BH-A1EV 2 5'UTR-CDS Intra-chr q15 q21.2 Seq+ 2235 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-OSBPL8 FRS2 chr12 69924740 + OSBPL8 chr12 76749801 - Exonic hg19 BRCA TCGA-BH-A1EV 2 5'UTR-CDS Intra-chr q15 q21.2 Seq+ 2236 ChimerSeq FusionScan TCGA_RNA-Seq MED24-ERBB2 MED24 chr17 38188901 - ERBB2 chr17 37868574 + Exonic hg19 BRCA TCGA-BH-A1EV 2 Out-of-Frame Intra-chr q21.1 q12 Oncogene 2237 ChimerSeq FusionScan TCGA_RNA-Seq KIRREL-RBP7 KIRREL chr1 157963518 + RBP7 chr1 10075839 + Exonic hg19 BRCA TCGA-BH-A1EV 2 Out-of-Frame Intra-chr q23.1 p36.22 Seq+ 2238 ChimerSeq FusionScan TCGA_RNA-Seq ICAM1-FDX1L ICAM1 chr19 10381902 + FDX1L chr19 10421616 - Exonic hg19 BRCA TCGA-BH-A1EV 2 In-Frame Intra-chr p13.2 2239 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP23-NLK ARHGAP23 chr17 36638919 + NLK chr17 26490568 + Exonic hg19 BRCA TCGA-BH-A1EV 2 Out-of-Frame Intra-chr q12 q11.2 CMGC:MAPK Seq+ 2240 ChimerSeq FusionScan TCGA_RNA-Seq ESR1-BNC2 ESR1 chr6 152163922 + BNC2 chr9 16738483 - Exonic hg19 BRCA TCGA-BH-A1EV 2 Out-of-Frame Inter-chr q25.1 Oncogene Tumor suppressor gene Transcription factor p22.2 Transcription factor Seq+ 2241 ChimerSeq FusionScan TCGA_RNA-Seq RARA-TBC1D3F RARA chr17 38508759 + TBC1D3F chr17 36289993 + Exonic hg19 BRCA TCGA-BH-A1EV 2 Out-of-Frame Intra-chr q21.2 Oncogene Transcription factor q12 2242 ChimerSeq FusionScan TCGA_RNA-Seq SPTA1-GRIP1 SPTA1 chr1 158631076 - GRIP1 chr12 66923694 - Exonic hg19 BRCA TCGA-BH-A1EV 2 In-Frame Inter-chr q23.1 q14.3 Seq+ 2243 ChimerSeq FusionScan TCGA_RNA-Seq HERC4-RUFY2 HERC4 chr10 69792534 - RUFY2 chr10 70105668 - Exonic hg19 BRCA TCGA-AR-A0U4 6 In-Frame Intra-chr q21.3 q21.3 Seq+ 2244 ChimerSeq FusionScan TCGA_RNA-Seq PRMT2-DIP2A PRMT2 chr21 48064400 + DIP2A chr21 47985625 + Exonic hg19 BRCA TCGA-AR-A0U4 5 In-Frame Intra-chr q22.3 q22.3 Seq+ 2245 ChimerSeq FusionScan TCGA_RNA-Seq TMEM245-FRRS1L TMEM245 chr9 111868787 - FRRS1L chr9 111912000 - Exonic hg19 BRCA TCGA-AR-A0U4 4 In-Frame Intra-chr q31.3 q31.3 Seq+ 2246 ChimerSeq FusionScan TCGA_RNA-Seq ZKSCAN5-SMO ZKSCAN5 chr7 99110214 + SMO chr7 128843224 + Exonic hg19 BRCA TCGA-AR-A0U4 3 In-Frame Intra-chr q22.1 Transcription factor q32.1 Oncogene Seq+ 2247 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPC-SUPT16H HNRNPC chr14 21737456 - SUPT16H chr14 21838647 - Exonic hg19 BRCA TCGA-AR-A0U4 2 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 2248 ChimerSeq FusionScan TCGA_RNA-Seq RAB1A-PHTF2 RAB1A chr2 65318116 - PHTF2 chr7 77522924 + Exonic hg19 BRCA TCGA-AR-A0U4 2 In-Frame Inter-chr p14 q11.23 Seq+ 2249 ChimerSeq FusionScan TCGA_RNA-Seq LRRC16A-MRS2 LRRC16A chr6 25285137 + MRS2 chr6 24405395 + Exonic hg19 BRCA TCGA-AR-A0U4 2 Out-of-Frame Intra-chr p22.3 Seq+ 2250 ChimerSeq FusionScan TCGA_RNA-Seq RARA-PRR11 RARA chr17 38474700 + PRR11 chr17 57247108 + Exonic hg19 BRCA TCGA-A2-A0YG 8 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 2251 ChimerSeq FusionScan TCGA_RNA-Seq RARA-PRR11 RARA chr17 38465538 + PRR11 chr17 57247108 + Exonic hg19 BRCA TCGA-A2-A0YG 7 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 2252 ChimerSeq FusionScan TCGA_RNA-Seq RARA-PRR11 RARA chr17 38474700 + PRR11 chr17 57262414 + Exonic hg19 BRCA TCGA-A2-A0YG 3 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 2253 ChimerSeq FusionScan TCGA_RNA-Seq SDHC-KDM3B SDHC chr1 161284215 + KDM3B chr5 137733866 + Exonic hg19 BRCA TCGA-A2-A0YG 2 In-Frame Inter-chr q23.3 Oncogene q31.2 Tumor suppressor gene 2254 ChimerSeq FusionScan TCGA_RNA-Seq UCK2-SNX27 UCK2 chr1 165797169 + SNX27 chr1 151630710 + Exonic hg19 BRCA TCGA-A2-A0YG 2 In-Frame Intra-chr q24.1 q21.3 Seq+ 2255 ChimerSeq FusionScan TCGA_RNA-Seq SGTA-DAZAP1 SGTA chr19 2783230 - DAZAP1 chr19 1417498 + Exonic hg19 BRCA TCGA-A2-A0YG 2 5'UTR-CDS Intra-chr p13.3 p13.3 2256 ChimerSeq FusionScan TCGA_RNA-Seq PTPRK-STXBP6 PTPRK chr6 128505576 - STXBP6 chr14 25326363 - Exonic hg19 BRCA TCGA-A2-A04W 8 In-Frame Inter-chr Tumor suppressor gene q12 Seq+ 2257 ChimerSeq FusionScan TCGA_RNA-Seq NPEPPS-FAM117A NPEPPS chr17 45623359 + FAM117A chr17 47810082 - Exonic hg19 BRCA TCGA-A2-A04W 5 In-Frame Intra-chr q21.32 q21.33 Seq+ 2258 ChimerSeq FusionScan TCGA_RNA-Seq SLC35B1-IGFBP4 SLC35B1 chr17 47784326 - IGFBP4 chr17 38609236 + Exonic hg19 BRCA TCGA-A2-A04W 4 In-Frame Intra-chr q21.33 q21.2 Tumor suppressor gene Seq+ 2259 ChimerSeq FusionScan TCGA_RNA-Seq FBXL20-TBC1D3F FBXL20 chr17 37557613 - TBC1D3F chr17 36285543 + Exonic hg19 BRCA TCGA-A2-A04W 2 CDS-5'UTR Intra-chr q12 q12 2260 ChimerSeq FusionScan TCGA_RNA-Seq RARA-CDK12 RARA chr17 38474700 + CDK12 chr17 37646809 + Exonic hg19 BRCA TCGA-A2-A04W 2 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q12 Oncogene Seq+ 2261 ChimerSeq FusionScan TCGA_RNA-Seq PTPRK-NMBR PTPRK chr6 128643183 - NMBR chr6 142400040 - Exonic hg19 BRCA TCGA-A2-A04W 2 Out-of-Frame Intra-chr Tumor suppressor gene q24.1 2262 ChimerSeq FusionScan TCGA_RNA-Seq SSH2-SLC35B1 SSH2 chr17 27977671 - SLC35B1 chr17 47778872 - Exonic hg19 BRCA TCGA-A2-A04W 2 Out-of-Frame Intra-chr q11.2 q21.33 Seq+ 2263 ChimerSeq FusionScan TCGA_RNA-Seq RARA-CDK12 RARA chr17 38465538 + CDK12 chr17 37646809 + Exonic hg19 BRCA TCGA-A2-A04W 2 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q12 Oncogene Seq+ 2264 ChimerSeq FusionScan TCGA_RNA-Seq KANSL1-LAYN KANSL1 chr17 44127898 - LAYN chr11 111414647 + Exonic hg19 BRCA TCGA-AC-A2FB 3 In-Frame Inter-chr q23.1 Seq+ 2265 ChimerSeq FusionScan TCGA_RNA-Seq UBAC2-GPR183 UBAC2 chr13 99896878 + GPR183 chr13 99948417 - Exonic hg19 BRCA TCGA-AC-A2FB 2 5'UTR-5'UTR Intra-chr q32.3 q32.3 2266 ChimerSeq FusionScan TCGA_RNA-Seq SSH2-ANO1 SSH2 chr17 28256955 - ANO1 chr11 69957812 + Exonic hg19 BRCA TCGA-AC-A2FB 2 Out-of-Frame Inter-chr q11.2 q13.3 Seq+ 2267 ChimerSeq FusionScan TCGA_RNA-Seq FAM211A-PEMT FAM211A chr17 16395058 - PEMT chr17 17480341 - Exonic hg19 BRCA TCGA-AR-A2LJ 8 In-Frame Intra-chr p11.2 Seq+ 2268 ChimerSeq FusionScan TCGA_RNA-Seq NCOR1-RSF1 NCOR1 chr17 16118675 - RSF1 chr11 77396204 - Exonic hg19 BRCA TCGA-AR-A2LJ 6 5'UTR-CDS Inter-chr p11.2 Oncogene q14.1 Seq+ 2269 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BRCA TCGA-AR-A2LJ 2 Out-of-Frame Intra-chr q22.2 q22.2 2270 ChimerSeq FusionScan TCGA_RNA-Seq PTPRU-EPB41 PTPRU chr1 29563229 + EPB41 chr1 29356911 + Exonic hg19 BRCA TCGA-B6-A0X1 2 Out-of-Frame Intra-chr p35.3 p35.3 Tumor suppressor gene Seq+ 2271 ChimerSeq FusionScan TCGA_RNA-Seq ACSL4-AMMECR1 ACSL4 chrX 108976367 - AMMECR1 chrX 109670031 - Exonic hg19 BRCA TCGA-B6-A0X1 2 5'UTR-5'UTR Intra-chr q23 q23 Seq+ 2272 ChimerSeq FusionScan TCGA_RNA-Seq UNK-ICAM2 UNK chr17 73781065 + ICAM2 chr17 62084095 - Exonic hg19 BRCA TCGA-BH-A1ES 3 5'UTR-5'UTR Intra-chr q25.1 q23.3 Seq+ 2273 ChimerSeq FusionScan TCGA_RNA-Seq GNAI3-SARS GNAI3 chr1 110091460 + SARS chr1 109766599 + Exonic hg19 BRCA TCGA-E2-A14P 7 In-Frame Intra-chr p13.3 p13.3 Seq+ 2274 ChimerSeq FusionScan TCGA_RNA-Seq TPTE2-DNAL4 TPTE2 chr13 20066989 - DNAL4 chr22 39178875 - Exonic hg19 BRCA TCGA-E2-A14P 2 CDS-5'UTR Inter-chr q12.11 Tumor suppressor gene q13.1 2275 ChimerSeq FusionScan TCGA_RNA-Seq C20orf194-ITPA C20orf194 chr20 3285086 - ITPA chr20 3202486 + Exonic hg19 BRCA TCGA-E2-A14P 2 In-Frame Intra-chr p13 p13 2276 ChimerSeq FusionScan TCGA_RNA-Seq WDR76-PDIA3 WDR76 chr15 44128414 + PDIA3 chr15 44046021 + Exonic hg19 BRCA TCGA-E2-A14P 2 In-Frame Intra-chr q15.3 q15.3 Seq+ 2277 ChimerSeq FusionScan TCGA_RNA-Seq FRG1-PPP1R1B FRG1 chr4 190876306 + PPP1R1B chr17 37786224 + Exonic hg19 BRCA TCGA-E2-A14P 2 In-Frame Inter-chr q12 Tumor suppressor gene 2278 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BRCA TCGA-E2-A14P 2 Out-of-Frame Intra-chr q22.2 q22.2 2279 ChimerSeq FusionScan TCGA_RNA-Seq TSNARE1-LYNX1 TSNARE1 chr8 143484464 - LYNX1 chr8 143857537 - Exonic hg19 BRCA TCGA-E2-A14P 2 5'UTR-5'UTR Intra-chr q24.3 q24.3 2280 ChimerSeq FusionScan TCGA_RNA-Seq GSK3B-FSTL1 GSK3B chr3 119720892 - FSTL1 chr3 120134874 - Exonic hg19 BRCA TCGA-E2-A14P 2 In-Frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q13.33 Seq+ 2281 ChimerSeq FusionScan TCGA_RNA-Seq NCOA1-GOLGB1 NCOA1 chr2 24896332 + GOLGB1 chr3 121388202 - Exonic hg19 BRCA TCGA-OL-A5RW 2 In-Frame Inter-chr p23.3 Oncogene Transcription factor q13.33 Seq+ 2282 ChimerSeq FusionScan TCGA_RNA-Seq VPS53-RTN4RL1 VPS53 chr17 600657 - RTN4RL1 chr17 1841102 - Exonic hg19 BRCA TCGA-OL-A5RW 2 Out-of-Frame Intra-chr Tumor suppressor gene p13.3 Seq+ 2283 ChimerSeq FusionScan TCGA_RNA-Seq SMURF2-NGFR SMURF2 chr17 62657946 - NGFR chr17 47579424 + Exonic hg19 BRCA TCGA-AR-A250 7 Out-of-Frame Intra-chr q24.1 q21.33 Tumor suppressor gene Seq+ 2284 ChimerSeq FusionScan TCGA_RNA-Seq SMURF2-IKZF3 SMURF2 chr17 62657946 - IKZF3 chr17 37949186 - Exonic hg19 BRCA TCGA-AR-A250 6 In-Frame Intra-chr q24.1 q21.1 Tumor suppressor gene Transcription factor Seq+ 2285 ChimerSeq FusionScan TCGA_RNA-Seq FUT10-GAB2 FUT10 chr8 33310733 - GAB2 chr11 77961446 - Exonic hg19 BRCA TCGA-AR-A250 3 In-Frame Inter-chr p12 q14.1 Seq+ 2286 ChimerSeq FusionScan TCGA_RNA-Seq PDK2-CDK12 PDK2 chr17 48182806 + CDK12 chr17 37627131 + Exonic hg19 BRCA TCGA-AR-A250 3 In-Frame Intra-chr q21.33 q12 Oncogene Seq+ 2287 ChimerSeq FusionScan TCGA_RNA-Seq PITPNC1-MBTD1 PITPNC1 chr17 65574373 + MBTD1 chr17 49302570 - Exonic hg19 BRCA TCGA-AR-A250 2 CDS-5'UTR Intra-chr q24.2 q21.33 Seq+ 2288 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-D8-A27T 2 5'UTR-5'UTR Inter-chr p13.2 p22 2289 ChimerSeq FusionScan TCGA_RNA-Seq CDKL3-PPP2CA CDKL3 chr5 133638280 - PPP2CA chr5 133541822 - Exonic hg19 BRCA TCGA-AO-A0JD 5 In-Frame Intra-chr q31.1 CMGC:CDKL q31.1 Tumor suppressor gene 2290 ChimerSeq FusionScan TCGA_RNA-Seq PPP2CA-CDKL3 PPP2CA chr5 133561450 - CDKL3 chr5 133642393 - Exonic hg19 BRCA TCGA-AO-A0JD 4 Out-of-Frame Intra-chr q31.1 Tumor suppressor gene q31.1 CMGC:CDKL Seq+ 2291 ChimerSeq FusionScan TCGA_RNA-Seq TMEM123-CNTN5 TMEM123 chr11 102272269 - CNTN5 chr11 99426875 + Exonic hg19 BRCA TCGA-AO-A0JD 4 CDS-5'UTR Intra-chr q22.2 q22.1 Seq+ 2292 ChimerSeq FusionScan TCGA_RNA-Seq PPP2CA-CDKL3 PPP2CA chr5 133561450 - CDKL3 chr5 133640258 - Exonic hg19 BRCA TCGA-AO-A0JD 3 In-Frame Intra-chr q31.1 Tumor suppressor gene q31.1 CMGC:CDKL Seq+ 2293 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1009-YAF2 KIAA1009 chr6 84922674 - YAF2 chr12 42555567 - Exonic hg19 BRCA TCGA-AO-A0JD 2 Out-of-Frame Inter-chr q12 2294 ChimerSeq FusionScan TCGA_RNA-Seq PPP2CA-CDKL3 PPP2CA chr5 133561450 - CDKL3 chr5 133644157 - Exonic hg19 BRCA TCGA-AO-A0JD 2 In-Frame Intra-chr q31.1 Tumor suppressor gene q31.1 CMGC:CDKL Seq+ 2295 ChimerSeq FusionScan TCGA_RNA-Seq PPP2CA-CDKL3 PPP2CA chr5 133561450 - CDKL3 chr5 133644418 - Exonic hg19 BRCA TCGA-AO-A0JD 2 Out-of-Frame Intra-chr q31.1 Tumor suppressor gene q31.1 CMGC:CDKL Seq+ 2296 ChimerSeq FusionScan TCGA_RNA-Seq MKL2-SHISA9 MKL2 chr16 14173211 + SHISA9 chr16 13297250 + Exonic hg19 BRCA TCGA-E9-A5FL 2 5'UTR-CDS Intra-chr p13.12 p13.12 Seq+ 2297 ChimerSeq FusionScan TCGA_RNA-Seq ATXN7L1-SHFM1 ATXN7L1 chr7 105516257 - SHFM1 chr7 96324203 - Exonic hg19 BRCA TCGA-E9-A5FL 2 In-Frame Intra-chr q22.3 2298 ChimerSeq FusionScan TCGA_RNA-Seq STK3-POLR2K STK3 chr8 99837742 - POLR2K chr8 101163574 + Exonic hg19 BRCA TCGA-E9-A5FL 2 CDS-5'UTR Intra-chr q22.2 q22.2 Seq+ 2299 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-E9-A1N4 2 5'UTR-5'UTR Inter-chr p13.2 p22 2300 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R12C-C19orf6 PPP1R12C chr19 55610151 - C19orf6 chr19 1014472 - Exonic hg19 BRCA TCGA-A8-A082 2 In-Frame Intra-chr q13.42 2301 ChimerSeq FusionScan TCGA_RNA-Seq AGPAT6-FNTA AGPAT6 chr8 41472567 + FNTA chr8 42940302 + Exonic hg19 BRCA TCGA-AN-A03Y 4 In-Frame Intra-chr p11.21 Seq+ 2302 ChimerSeq FusionScan TCGA_RNA-Seq FNTA-TCEA1 FNTA chr8 42938323 + TCEA1 chr8 54923052 - Exonic hg19 BRCA TCGA-AN-A03Y 2 Out-of-Frame Intra-chr p11.21 q11.23 2303 ChimerSeq FusionScan TCGA_RNA-Seq NBPF24-PICALM NBPF24 chr1 146082162 - PICALM chr11 85692271 - Exonic hg19 BRCA TCGA-AN-A03Y 2 3'UTR-CDS Inter-chr q14.2 2304 ChimerSeq FusionScan TCGA_RNA-Seq UVRAG-MAP6 UVRAG chr11 75623083 + MAP6 chr11 75319367 - Exonic hg19 BRCA TCGA-AN-A03Y 2 In-Frame Intra-chr q13.5 Tumor suppressor gene q13.5 Seq+ 2305 ChimerSeq FusionScan TCGA_RNA-Seq NCK1-IL20RB NCK1 chr3 136647069 + IL20RB chr3 136708282 + Exonic hg19 BRCA TCGA-AN-A03Y 2 In-Frame Intra-chr q22.3 q22.3 Seq+ 2306 ChimerSeq FusionScan TCGA_RNA-Seq MED1-TBC1D3G MED1 chr17 37607290 - TBC1D3G chr17 34806519 - Exonic hg19 BRCA TCGA-A2-A1G1 3 CDS-5'UTR Intra-chr q12 Tumor suppressor gene q12 2307 ChimerSeq FusionScan TCGA_RNA-Seq MED1-TBC1D3F MED1 chr17 37607290 - TBC1D3F chr17 36285543 + Exonic hg19 BRCA TCGA-A2-A1G1 3 CDS-5'UTR Intra-chr q12 Tumor suppressor gene q12 2308 ChimerSeq FusionScan TCGA_RNA-Seq CTIF-WASF2 CTIF chr18 46065683 + WASF2 chr1 27755443 - Exonic hg19 BRCA TCGA-A2-A1G1 2 5'UTR-5'UTR Inter-chr p36.11 Seq+ 2309 ChimerSeq FusionScan TCGA_RNA-Seq BID-MICAL3 BID chr22 18257146 - MICAL3 chr22 18274067 - Exonic hg19 BRCA TCGA-A2-A1G1 2 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 2310 ChimerSeq FusionScan TCGA_RNA-Seq LINC00152-ANAPC1 LINC00152 chr2 87755164 + ANAPC1 chr2 112566758 - Exonic hg19 BRCA TCGA-A2-A1G1 2 5'UTR-CDS Intra-chr q13 Tumor suppressor gene 2311 ChimerSeq FusionScan TCGA_RNA-Seq CASC3-ZNF254 CASC3 chr17 38297860 + ZNF254 chr19 24309055 + Exonic hg19 BRCA TCGA-A2-A1G1 2 Out-of-Frame Inter-chr q21.1 p12 Transcription factor Seq+ 2312 ChimerSeq FusionScan TCGA_RNA-Seq CTIF-WASF2 CTIF chr18 46066202 + WASF2 chr1 27755443 - Exonic hg19 BRCA TCGA-A2-A1G1 2 5'UTR-5'UTR Inter-chr p36.11 Seq+ 2313 ChimerSeq FusionScan TCGA_RNA-Seq RPS12-HSH2D RPS12 chr6 133136227 + HSH2D chr19 16263361 + Exonic hg19 BRCA TCGA-A2-A1G1 2 In-Frame Inter-chr q23.2 p13.11 2314 ChimerSeq FusionScan TCGA_RNA-Seq LRRN2-CTSS LRRN2 chr1 204654447 - CTSS chr1 150730456 - Exonic hg19 BRCA TCGA-BH-A18J 3 5'UTR-CDS Intra-chr q32.1 q21.3 Seq+ 2315 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC14-SNX7 ZCCHC14 chr16 87493613 - SNX7 chr1 99203792 + Exonic hg19 BRCA TCGA-BH-A18J 3 Out-of-Frame Inter-chr q24.2 p21.3 Seq+ 2316 ChimerSeq FusionScan TCGA_RNA-Seq LUC7L-ATXN2L LUC7L chr16 279277 - ATXN2L chr16 28845385 + Exonic hg19 BRCA TCGA-BH-A18J 2 Out-of-Frame Intra-chr p13.3 p11.2 Seq+ 2317 ChimerSeq FusionScan TCGA_RNA-Seq NSL1-TMEM206 NSL1 chr1 212955713 - TMEM206 chr1 212560442 - Exonic hg19 BRCA TCGA-BH-A18J 2 In-Frame Intra-chr q32.3 q32.3 Seq+ 2318 ChimerSeq FusionScan TCGA_RNA-Seq GUK1-ITPKB GUK1 chr1 228328064 + ITPKB chr1 226836472 - Exonic hg19 BRCA TCGA-BH-A18J 2 Out-of-Frame Intra-chr q42.13 q42.12 2319 ChimerSeq FusionScan TCGA_RNA-Seq RPAIN-USP6 RPAIN chr17 5326149 + USP6 chr17 5064822 + Exonic hg19 BRCA TCGA-BH-A18J 2 Out-of-Frame Intra-chr p13.2 p13.2 Seq+ 2320 ChimerSeq FusionScan TCGA_RNA-Seq QKI-PACRG QKI chr6 163899928 + PACRG chr6 163483181 + Exonic hg19 BRCA TCGA-AN-A0XU 7 In-Frame Intra-chr q26 q26 Tumor suppressor gene Seq+ 2321 ChimerSeq FusionScan TCGA_RNA-Seq DTNB-CNOT2 DTNB chr2 25875462 - CNOT2 chr12 70729217 + Exonic hg19 BRCA TCGA-AN-A0XU 2 In-Frame Inter-chr p23.3 q15 2322 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-BH-A1FL 3 5'UTR-5'UTR Inter-chr p13.2 p22 2323 ChimerSeq FusionScan TCGA_RNA-Seq ZMIZ1-L3MBTL3 ZMIZ1 chr10 80976031 + L3MBTL3 chr6 130343371 + Exonic hg19 BRCA TCGA-BH-A1FL 2 CDS-5'UTR Inter-chr q22.3 q23.1 Transcription factor 2324 ChimerSeq FusionScan TCGA_RNA-Seq DLG1-TM4SF19 DLG1 chr3 197009549 - TM4SF19 chr3 196054462 - Exonic hg19 BRCA TCGA-BH-A1FL 2 CDS-5'UTR Intra-chr q29 Tumor suppressor gene q29 Seq+ 2325 ChimerSeq FusionScan TCGA_RNA-Seq SBNO2-C19orf26 SBNO2 chr19 1147307 - C19orf26 chr19 1233635 - Exonic hg19 BRCA TCGA-GM-A2DD 2 In-Frame Intra-chr p13.3 Seq+ 2326 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-E2-A15G 2 5'UTR-5'UTR Inter-chr p13.2 p22 2327 ChimerSeq FusionScan TCGA_RNA-Seq ZNF219-HNRNPC ZNF219 chr14 21566470 - HNRNPC chr14 21702388 - Exonic hg19 BRCA TCGA-B6-A0I6 9 5'UTR-5'UTR Intra-chr q11.2 Transcription factor q11.2 Seq+ 2328 ChimerSeq FusionScan TCGA_RNA-Seq ZNF219-HNRNPC ZNF219 chr14 21572669 - HNRNPC chr14 21702388 - Exonic hg19 BRCA TCGA-B6-A0I6 2 5'UTR-5'UTR Intra-chr q11.2 Transcription factor q11.2 Seq+ 2329 ChimerSeq FusionScan TCGA_RNA-Seq ASMTL-P2RY8 ASMTL chrX 1553914 - P2RY8 chrY 1535475 - Exonic hg19 BRCA TCGA-EW-A1P5 2 5'UTR-5'UTR Inter-chr p22.33 p22.33 Seq+ 2330 ChimerSeq FusionScan TCGA_RNA-Seq CPNE1-ERCC6 CPNE1 chr20 34252681 - ERCC6 chr10 50732823 - Exonic hg19 BRCA TCGA-A7-A2KD 5 5'UTR-CDS Inter-chr q11.22 q11.23 Seq+ 2331 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0182-METTL23 KIAA0182 chr16 85647004 + METTL23 chr17 74729059 + Exonic hg19 BRCA TCGA-A7-A2KD 4 Out-of-Frame Inter-chr q25.1 Seq+ 2332 ChimerSeq FusionScan TCGA_RNA-Seq ZNF136-RNASEH2A ZNF136 chr19 12274021 + RNASEH2A chr19 12917821 + Exonic hg19 BRCA TCGA-A7-A2KD 4 Out-of-Frame Intra-chr p13.2 Transcription factor p13.13 Seq+ 2333 ChimerSeq FusionScan TCGA_RNA-Seq SEPT9-JMJD6 SEPT9 chr17 75277636 + JMJD6 chr17 74721937 - Exonic hg19 BRCA TCGA-A7-A2KD 4 Out-of-Frame Intra-chr q25.1 Seq+ 2334 ChimerSeq FusionScan TCGA_RNA-Seq ERCC6-PREX1 ERCC6 chr10 50736462 - PREX1 chr20 47324959 - Exonic hg19 BRCA TCGA-A7-A2KD 3 Out-of-Frame Inter-chr q11.23 q13.13 Seq+ 2335 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0182-METTL23 KIAA0182 chr16 85647004 + METTL23 chr17 74729374 + Exonic hg19 BRCA TCGA-A7-A2KD 3 In-Frame Inter-chr q25.1 Seq+ 2336 ChimerSeq FusionScan TCGA_RNA-Seq STX8-HSD17B4 STX8 chr17 9395145 - HSD17B4 chr5 118792009 + Exonic hg19 BRCA TCGA-A7-A2KD 2 In-Frame Inter-chr p13.1 q23.1 Seq+ 2337 ChimerSeq FusionScan TCGA_RNA-Seq ADNP2-L3MBTL4 ADNP2 chr18 77867356 + L3MBTL4 chr18 6215834 - Exonic hg19 BRCA TCGA-A7-A2KD 2 5'UTR-CDS Intra-chr q23 Transcription factor p11.31 Tumor suppressor gene Transcription factor Seq+ 2338 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0182-METTL23 KIAA0182 chr16 85645137 + METTL23 chr17 74729374 + Exonic hg19 BRCA TCGA-A7-A2KD 2 5'UTR-5'UTR Inter-chr q25.1 Seq+ 2339 ChimerSeq FusionScan TCGA_RNA-Seq CPNE1-ERCC6 CPNE1 chr20 34252723 - ERCC6 chr10 50732823 - Exonic hg19 BRCA TCGA-A7-A2KD 2 5'UTR-CDS Inter-chr q11.22 q11.23 Seq+ 2340 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0100-TEX14 KIAA0100 chr17 26965269 - TEX14 chr17 56692706 - Exonic hg19 BRCA TCGA-A7-A2KD 2 Out-of-Frame Intra-chr q11.2 q22 Seq+ 2341 ChimerSeq FusionScan TCGA_RNA-Seq DSCR3-TTC3 DSCR3 chr21 38639538 - TTC3 chr21 38480691 + Exonic hg19 BRCA TCGA-A7-A2KD 2 Out-of-Frame Intra-chr q22.13 q22.13 Seq+ 2342 ChimerSeq FusionScan TCGA_RNA-Seq DSE-FAM26F DSE chr6 116720829 + FAM26F chr6 116784445 + Exonic hg19 BRCA TCGA-A7-A2KD 2 Out-of-Frame Intra-chr q22.1 q22.1 2343 ChimerSeq FusionScan TCGA_RNA-Seq HSPA14-MRPS35 HSPA14 chr10 14882156 + MRPS35 chr12 27888379 + Exonic hg19 BRCA TCGA-A7-A2KD 2 Out-of-Frame Inter-chr p13 p11.22 Seq+ 2344 ChimerSeq FusionScan TCGA_RNA-Seq RNF121-SPCS2 RNF121 chr11 71640170 + SPCS2 chr11 74676078 + Exonic hg19 BRCA TCGA-D8-A1XF 10 In-Frame Intra-chr q13.4 q13.4 2345 ChimerSeq FusionScan TCGA_RNA-Seq CASC4-TGM5 CASC4 chr15 44630515 + TGM5 chr15 43533188 - Exonic hg19 BRCA TCGA-BH-A0E6 2 In-Frame Intra-chr q15.3 q15.2 Seq+ 2346 ChimerSeq FusionScan TCGA_RNA-Seq GTF3C6-LACE1 GTF3C6 chr6 111280455 + LACE1 chr6 108831414 + Exonic hg19 BRCA TCGA-E2-A14S 5 In-Frame Intra-chr q21 Seq+ 2347 ChimerSeq FusionScan TCGA_RNA-Seq PPFIA1-ARHGAP32 PPFIA1 chr11 70118542 + ARHGAP32 chr11 128963602 - Exonic hg19 BRCA TCGA-E2-A14S 3 In-Frame Intra-chr q13.3 q24.3 Seq+ 2348 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0146-BAGE5 KIAA0146 chr8 48206619 + BAGE5 chr21 11058324 - Exonic hg19 BRCA TCGA-E2-A14S 2 CDS-3'UTR Inter-chr 2349 ChimerSeq FusionScan TCGA_RNA-Seq BIRC6-NBAS BIRC6 chr2 32774548 + NBAS chr2 15679480 - Exonic hg19 BRCA TCGA-E2-A14S 2 In-Frame Intra-chr p22.3 p24.3 2350 ChimerSeq FusionScan TCGA_RNA-Seq LDLRAD3-ELP4 LDLRAD3 chr11 35965694 + ELP4 chr11 31804940 + Exonic hg19 BRCA TCGA-D8-A142 4 Out-of-Frame Intra-chr p13 p13 Seq+ 2351 ChimerSeq FusionScan TCGA_RNA-Seq EIF2AK2-FAM82A1 EIF2AK2 chr2 37362626 - FAM82A1 chr2 38216683 + Exonic hg19 BRCA TCGA-D8-A142 3 In-Frame Intra-chr p22.2 Seq+ 2352 ChimerSeq FusionScan TCGA_RNA-Seq FGFR2-ATE1 FGFR2 chr10 123357475 - ATE1 chr10 123683844 - Exonic hg19 BRCA TCGA-D8-A142 2 5'UTR-CDS Intra-chr q26.13 TK:FGFR Oncogene q26.13 Seq+ 2353 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BRCA TCGA-D8-A142 2 Out-of-Frame Intra-chr q22.2 q22.2 2354 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0556-XPO6 KIAA0556 chr16 27561498 + XPO6 chr16 28133083 - Exonic hg19 BRCA TCGA-E9-A1RB 2 Out-of-Frame Intra-chr p12.1 p12.1 2355 ChimerSeq FusionScan TCGA_RNA-Seq PHC3-UBR4 PHC3 chr3 169889160 - UBR4 chr1 19455568 - Exonic hg19 BRCA TCGA-E9-A1RB 2 Out-of-Frame Inter-chr q26.2 Tumor suppressor gene p36.13 2356 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-E9-A1RB 2 5'UTR-5'UTR Inter-chr p13.2 p22 2357 ChimerSeq FusionScan TCGA_RNA-Seq BCAS3-POLD4 BCAS3 chr17 59001861 + POLD4 chr11 67120548 - Exonic hg19 BRCA TCGA-AN-A0XW 2 In-Frame Inter-chr q23.2 q13.2 Seq+ 2358 ChimerSeq FusionScan TCGA_RNA-Seq ACO1-TYRP1 ACO1 chr9 32384733 + TYRP1 chr9 12693911 + Exonic hg19 BRCA TCGA-OL-A5RY 4 5'UTR-5'UTR Intra-chr p21.1 p23 Seq+ 2359 ChimerSeq FusionScan TCGA_RNA-Seq EIF4G2-NUP98 EIF4G2 chr11 10827453 - NUP98 chr11 3716836 - Exonic hg19 BRCA TCGA-OL-A5RY 2 Out-of-Frame Intra-chr p15.4 p15.4 Oncogene Tumor suppressor gene 2360 ChimerSeq FusionScan TCGA_RNA-Seq SCMH1-PPT1 SCMH1 chr1 41536266 - PPT1 chr1 40539855 - Exonic hg19 BRCA TCGA-E9-A1R7 3 Out-of-Frame Intra-chr p34.2 Transcription factor p34.2 Seq+ 2361 ChimerSeq FusionScan TCGA_RNA-Seq SEC22B-ACOT11 SEC22B chr1 145096621 + ACOT11 chr1 55062931 + Exonic hg19 BRCA TCGA-E9-A1R7 2 Out-of-Frame Intra-chr p12 p32.3 Seq+ 2362 ChimerSeq FusionScan TCGA_RNA-Seq ACOT11-C8B ACOT11 chr1 55051577 + C8B chr1 57417853 - Exonic hg19 BRCA TCGA-E9-A1R7 2 In-Frame Intra-chr p32.3 p32.2 Seq+ 2363 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-TMEM60 PTPN12 chr7 77221573 + TMEM60 chr7 77423740 - Exonic hg19 BRCA TCGA-E9-A1R7 2 CDS-5'UTR Intra-chr q11.23 Tumor suppressor gene q11.23 2364 ChimerSeq FusionScan TCGA_RNA-Seq PEF1-OSBPL9 PEF1 chr1 32110441 - OSBPL9 chr1 52211207 + Exonic hg19 BRCA TCGA-E9-A1R7 2 In-Frame Intra-chr p35.2 p32.3 Seq+ 2365 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-CLIP2 MLL3 chr7 151871215 - CLIP2 chr7 73811403 + Exonic hg19 BRCA TCGA-AO-A126 3 In-Frame Intra-chr Tumor suppressor gene q11.23 Seq+ 2366 ChimerSeq FusionScan TCGA_RNA-Seq TANC2-CHD6 TANC2 chr17 61086987 + CHD6 chr20 40086068 - Exonic hg19 BRCA TCGA-A1-A0SJ 6 Out-of-Frame Inter-chr q23.2 q12 Seq+ 2367 ChimerSeq FusionScan TCGA_RNA-Seq UVRAG-INTS4 UVRAG chr11 75623083 + INTS4 chr11 77618856 - Exonic hg19 BRCA TCGA-A1-A0SJ 6 In-Frame Intra-chr q13.5 Tumor suppressor gene q14.1 Seq+ 2368 ChimerSeq FusionScan TCGA_RNA-Seq TANC2-CHD6 TANC2 chr17 61086987 + CHD6 chr20 40102157 - Exonic hg19 BRCA TCGA-A1-A0SJ 5 Out-of-Frame Inter-chr q23.2 q12 Seq+ 2369 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP42-PGR ARHGAP42 chr11 100558563 + PGR chr11 100933483 - Exonic hg19 BRCA TCGA-A1-A0SJ 3 In-Frame Intra-chr q22.1 q22.1 Tumor suppressor gene Transcription factor Seq+ 2370 ChimerSeq FusionScan TCGA_RNA-Seq WNT11-TSPAN8 WNT11 chr11 75917368 - TSPAN8 chr12 71551567 - Exonic hg19 BRCA TCGA-A1-A0SJ 2 CDS-5'UTR Inter-chr q13.5 Tumor suppressor gene q21.1 Seq+ 2371 ChimerSeq FusionScan TCGA_RNA-Seq ZC3H11A-TMCC2 ZC3H11A chr1 203800899 + TMCC2 chr1 205238077 + Exonic hg19 BRCA TCGA-A2-A1FW 12 Out-of-Frame Intra-chr q32.1 q32.1 Seq+ 2372 ChimerSeq FusionScan TCGA_RNA-Seq TUFT1-PRKCA TUFT1 chr1 151512902 + PRKCA chr17 64782984 + Exonic hg19 BRCA TCGA-A2-A1FW 12 In-Frame Inter-chr q21.3 q24.2 Seq+ 2373 ChimerSeq FusionScan TCGA_RNA-Seq VMP1-RNFT1 VMP1 chr17 57851246 + RNFT1 chr17 58031507 - Exonic hg19 BRCA TCGA-A2-A1FW 5 In-Frame Intra-chr q23.1 q23.1 Seq+ 2374 ChimerSeq FusionScan TCGA_RNA-Seq CDC42SE1-TNKS CDC42SE1 chr1 151031954 - TNKS chr8 9619025 + Exonic hg19 BRCA TCGA-A2-A1FW 5 5'UTR-CDS Inter-chr q21.3 p23.1 Seq+ 2375 ChimerSeq FusionScan TCGA_RNA-Seq ATRN-RNF24 ATRN chr20 3557644 + RNF24 chr20 3915720 - Exonic hg19 BRCA TCGA-A2-A1FW 5 Out-of-Frame Intra-chr p13 p13 Seq+ 2376 ChimerSeq FusionScan TCGA_RNA-Seq DYNLL2-SEPT4 DYNLL2 chr17 56161044 + SEPT4 chr17 56603674 - Exonic hg19 BRCA TCGA-A2-A1FW 5 5'UTR-5'UTR Intra-chr q22 q22 Tumor suppressor gene Seq+ 2377 ChimerSeq FusionScan TCGA_RNA-Seq RAB3GAP2-CNIH4 RAB3GAP2 chr1 220383729 - CNIH4 chr1 224563496 + Exonic hg19 BRCA TCGA-A2-A1FW 4 Out-of-Frame Intra-chr q41 q42.11 Seq+ 2378 ChimerSeq FusionScan TCGA_RNA-Seq CPD-AATF CPD chr17 28748001 + AATF chr17 35376303 + Exonic hg19 BRCA TCGA-A2-A1FW 4 In-Frame Intra-chr q11.2 Tumor suppressor gene Seq+ 2379 ChimerSeq FusionScan TCGA_RNA-Seq POGK-FMOD POGK chr1 166810325 + FMOD chr1 203311622 - Exonic hg19 BRCA TCGA-A2-A1FW 3 Out-of-Frame Intra-chr q24.1 Transcription factor q32.1 Seq+ 2380 ChimerSeq FusionScan TCGA_RNA-Seq C20orf194-TDRD10 C20orf194 chr20 3354694 - TDRD10 chr1 154514499 + Exonic hg19 BRCA TCGA-A2-A1FW 3 In-Frame Inter-chr p13 q21.3 Seq+ 2381 ChimerSeq FusionScan TCGA_RNA-Seq TNRC6C-PLCB4 TNRC6C chr17 76075622 + PLCB4 chr20 9433993 + Exonic hg19 BRCA TCGA-A2-A1FW 3 In-Frame Inter-chr q25.3 p12.3 Seq+ 2382 ChimerSeq FusionScan TCGA_RNA-Seq NBPF24-USP32 NBPF24 chr1 146082162 - USP32 chr17 58348842 - Exonic hg19 BRCA TCGA-A2-A1FW 3 3'UTR-CDS Inter-chr q23.2 2383 ChimerSeq FusionScan TCGA_RNA-Seq TUFT1-PRKCA TUFT1 chr1 151512902 + PRKCA chr17 64784956 + Exonic hg19 BRCA TCGA-A2-A1FW 3 In-Frame Inter-chr q21.3 q24.2 Seq+ 2384 ChimerSeq FusionScan TCGA_RNA-Seq TNRC6C-PLCB4 TNRC6C chr17 76079247 + PLCB4 chr20 9433993 + Exonic hg19 BRCA TCGA-A2-A1FW 2 In-Frame Inter-chr q25.3 p12.3 Seq+ 2385 ChimerSeq FusionScan TCGA_RNA-Seq ETFB-LIM2 ETFB chr19 51857403 - LIM2 chr19 51883893 - Exonic hg19 BRCA TCGA-B6-A0RT 4 Out-of-Frame Intra-chr q13.41 q13.41 Seq+ 2386 ChimerSeq FusionScan TCGA_RNA-Seq ZC3H7A-LITAF ZC3H7A chr16 11875280 - LITAF chr16 11650591 - Exonic hg19 BRCA TCGA-B6-A0RT 3 CDS-5'UTR Intra-chr p13.13 p13.13 Tumor suppressor gene Seq+ 2387 ChimerSeq FusionScan TCGA_RNA-Seq PPP1CB-BRE PPP1CB chr2 28975042 + BRE chr2 28152698 + Exonic hg19 BRCA TCGA-B6-A0RT 2 Out-of-Frame Intra-chr p23.2 Seq+ 2388 ChimerSeq FusionScan TCGA_RNA-Seq ZFX-KLHL15 ZFX chrX 24227157 + KLHL15 chrX 24007147 - Exonic hg19 BRCA TCGA-BH-A1EX 4 Out-of-Frame Intra-chr p22.11 Transcription factor p22.11 Seq+ 2389 ChimerSeq FusionScan TCGA_RNA-Seq CD300LF-SIL1 CD300LF chr17 72694507 - SIL1 chr5 138463542 - Exonic hg19 BRCA TCGA-BH-A1EX 2 CDS-5'UTR Inter-chr q25.1 q31.2 2390 ChimerSeq FusionScan TCGA_RNA-Seq REC8-HMGB2 REC8 chr14 24648932 + HMGB2 chr4 174254146 - Exonic hg19 BRCA TCGA-EW-A1P0 2 In-Frame Inter-chr q12 q34.1 2391 ChimerSeq FusionScan TCGA_RNA-Seq CREBBP-NUBP1 CREBBP chr16 3819174 - NUBP1 chr16 10846466 + Exonic hg19 BRCA TCGA-B6-A0IA 6 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.13 Seq+ 2392 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC1-FBXL5 DNAJC1 chr10 22171210 - FBXL5 chr4 15607422 - Exonic hg19 BRCA TCGA-B6-A0IA 2 Out-of-Frame Inter-chr p12.31 p15.32 Seq+ 2393 ChimerSeq FusionScan TCGA_RNA-Seq CREBBP-NUBP1 CREBBP chr16 3819174 - NUBP1 chr16 10849577 + Exonic hg19 BRCA TCGA-B6-A0IA 2 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.13 Seq+ 2394 ChimerSeq FusionScan TCGA_RNA-Seq RPL19-CCL11 RPL19 chr17 37356602 + CCL11 chr17 32614114 + Exonic hg19 BRCA TCGA-BH-A0B7 8 Out-of-Frame Intra-chr q12 q12 Seq+ 2395 ChimerSeq FusionScan TCGA_RNA-Seq KIF5B-HPS4 KIF5B chr10 32337391 - HPS4 chr22 26860792 - Exonic hg19 BRCA TCGA-BH-A0B7 5 Out-of-Frame Inter-chr p11.22 q12.1 Seq+ 2396 ChimerSeq FusionScan TCGA_RNA-Seq ANKLE2-NHP2L1 ANKLE2 chr12 133324417 - NHP2L1 chr22 42076368 - Exonic hg19 BRCA TCGA-BH-A0B7 4 In-Frame Inter-chr q24.33 Seq+ 2397 ChimerSeq FusionScan TCGA_RNA-Seq GTF2F2-NBEA GTF2F2 chr13 45781640 + NBEA chr13 35923244 + Exonic hg19 BRCA TCGA-BH-A0B7 3 In-Frame Intra-chr q14.12 q13.3 Seq+ 2398 ChimerSeq FusionScan TCGA_RNA-Seq SCYL1-FRMD8 SCYL1 chr11 65294588 + FRMD8 chr11 65172334 + Exonic hg19 BRCA TCGA-BH-A0B7 2 In-Frame Intra-chr q13.1 Other:SCY1 Tumor suppressor gene q13.1 Seq+ 2399 ChimerSeq FusionScan TCGA_RNA-Seq MTSS1-ST3GAL1 MTSS1 chr8 125740124 - ST3GAL1 chr8 134478333 - Exonic hg19 BRCA TCGA-BH-A0B7 2 In-Frame Intra-chr q24.13 Tumor suppressor gene q24.22 Seq+ 2400 ChimerSeq FusionScan TCGA_RNA-Seq EEA1-PAH EEA1 chr12 93258635 - PAH chr12 103249110 - Exonic hg19 BRCA TCGA-BH-A0B7 2 In-Frame Intra-chr q22 Transcription factor q23.2 Seq+ 2401 ChimerSeq FusionScan TCGA_RNA-Seq ADAM9-PROSC ADAM9 chr8 38865502 + PROSC chr8 37623043 + Exonic hg19 BRCA TCGA-WT-AB41 2 In-Frame Intra-chr Seq+ 2402 ChimerSeq FusionScan TCGA_RNA-Seq KIF16B-PLCB1 KIF16B chr20 16553873 - PLCB1 chr20 8665578 + Exonic hg19 BRCA TCGA-BH-A1FH 5 Out-of-Frame Intra-chr p12.1 p12.3 Seq+ 2403 ChimerSeq FusionScan TCGA_RNA-Seq FAM104A-SLC39A11 FAM104A chr17 71223303 - SLC39A11 chr17 71027853 - Exonic hg19 BRCA TCGA-BH-A1FH 2 In-Frame Intra-chr q25.1 q25.1 Seq+ 2404 ChimerSeq FusionScan TCGA_RNA-Seq ACTN4-FTO ACTN4 chr19 39138547 + FTO chr16 53844051 + Exonic hg19 BRCA TCGA-E2-A150 14 In-Frame Inter-chr q12.2 Seq+ 2405 ChimerSeq FusionScan TCGA_RNA-Seq DSTN-CCT6A DSTN chr20 17550856 + CCT6A chr7 56120114 + Exonic hg19 BRCA TCGA-E2-A150 5 Out-of-Frame Inter-chr p12.1 p11.2 Seq+ 2406 ChimerSeq FusionScan TCGA_RNA-Seq DSTN-CCT6A DSTN chr20 17550856 + CCT6A chr7 56122061 + Exonic hg19 BRCA TCGA-E2-A150 3 In-Frame Inter-chr p12.1 p11.2 Seq+ 2407 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57728677 + VMP1 chr17 57886156 + Exonic hg19 BRCA TCGA-E2-A150 2 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 2408 ChimerSeq FusionScan TCGA_RNA-Seq MPDZ-LURAP1L MPDZ chr9 13247633 - LURAP1L chr9 12821384 + Exonic hg19 BRCA TCGA-E2-A150 2 In-Frame Intra-chr p23 p23 Seq+ 2409 ChimerSeq FusionScan TCGA_RNA-Seq ATP5H-CHCHD2 ATP5H chr17 73043019 - CHCHD2 chr7 56172168 - Exonic hg19 BRCA TCGA-E2-A150 2 5'UTR-CDS Inter-chr q25.1 p11.2 2410 ChimerSeq FusionScan TCGA_RNA-Seq TNS3-TPD52L2 TNS3 chr7 47451324 - TPD52L2 chr20 62514102 + Exonic hg19 BRCA TCGA-E2-A150 2 CDS-5'UTR Inter-chr p12.3 q13.33 2411 ChimerSeq FusionScan TCGA_RNA-Seq LMNB2-GNG7 LMNB2 chr19 2444401 - GNG7 chr19 2555186 - Exonic hg19 BRCA TCGA-A8-A08R 2 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 2412 ChimerSeq FusionScan TCGA_RNA-Seq TMEM181-HMGCLL1 TMEM181 chr6 159029782 + HMGCLL1 chr6 55304357 - Exonic hg19 BRCA TCGA-A8-A08R 2 Out-of-Frame Intra-chr q25.3 p12.1 Seq+ 2413 ChimerSeq FusionScan TCGA_RNA-Seq CTNND1-TMX2 CTNND1 chr11 57529518 + TMX2 chr11 57505079 + Exonic hg19 BRCA TCGA-AR-A1AH 3 5'UTR-5'UTR Intra-chr q12.1 Tumor suppressor gene q12.1 Seq+ 2414 ChimerSeq FusionScan TCGA_RNA-Seq PRICKLE1-FGD4 PRICKLE1 chr12 42983266 - FGD4 chr12 32791588 + Exonic hg19 BRCA TCGA-AR-A1AH 2 5'UTR-CDS Intra-chr q12 Tumor suppressor gene p11.21 Seq+ 2415 ChimerSeq FusionScan TCGA_RNA-Seq SNHG12-YIPF1 SNHG12 chr1 28908101 - YIPF1 chr1 54325826 - Exonic hg19 BRCA TCGA-LD-A9QF 5 3'UTR-3'UTR Intra-chr p35.3 p32.3 Seq+ 2416 ChimerSeq FusionScan TCGA_RNA-Seq MED1-ANKFN1 MED1 chr17 37604050 - ANKFN1 chr17 54305277 + Exonic hg19 BRCA TCGA-LD-A9QF 2 In-Frame Intra-chr q12 Tumor suppressor gene q22 Seq+ 2417 ChimerSeq FusionScan TCGA_RNA-Seq SPOP-RARA SPOP chr17 47755294 - RARA chr17 38487108 + Exonic hg19 BRCA TCGA-LD-A9QF 2 5'UTR-5'UTR Intra-chr q21.33 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor Seq+ 2418 ChimerSeq FusionScan TCGA_RNA-Seq RABGAP1L-MGST3 RABGAP1L chr1 174128795 + MGST3 chr1 165619077 + Exonic hg19 BRCA TCGA-AR-A255 2 5'UTR-5'UTR Intra-chr q25.1 q24.1 Seq+ 2419 ChimerSeq FusionScan TCGA_RNA-Seq SPTAN1-CADPS2 SPTAN1 chr9 131314975 + CADPS2 chr7 122377122 - Exonic hg19 BRCA TCGA-D8-A1JI 8 5'UTR-CDS Inter-chr q34.11 q31.32 Seq+ 2420 ChimerSeq FusionScan TCGA_RNA-Seq PTGES2-DENND1A PTGES2 chr9 130889717 - DENND1A chr9 126345549 - Exonic hg19 BRCA TCGA-D8-A1JI 5 In-Frame Intra-chr q34.11 q33.3 Seq+ 2421 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0368-PACS1 KIAA0368 chr9 114182296 - PACS1 chr11 66000430 + Exonic hg19 BRCA TCGA-D8-A1JI 2 Out-of-Frame Inter-chr q31.3 q13.1 Seq+ 2422 ChimerSeq FusionScan TCGA_RNA-Seq SNX14-EYS SNX14 chr6 86303296 - EYS chr6 66205886 - Exonic hg19 BRCA TCGA-D8-A73W 2 CDS-5'UTR Intra-chr q14.3 q12 Seq+ 2423 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-E9-A1RC 4 5'UTR-5'UTR Inter-chr p13.2 p22 2424 ChimerSeq FusionScan TCGA_RNA-Seq HARS-FAM53C HARS chr5 140070439 - FAM53C chr5 137680513 + Exonic hg19 BRCA TCGA-E9-A1RC 2 Out-of-Frame Intra-chr q31.3 q31.2 Seq+ 2425 ChimerSeq FusionScan TCGA_RNA-Seq HARS-FAM53C HARS chr5 140070439 - FAM53C chr5 137676872 + Exonic hg19 BRCA TCGA-E9-A1RC 2 CDS-5'UTR Intra-chr q31.3 q31.2 Seq+ 2426 ChimerSeq FusionScan TCGA_RNA-Seq TRMT11-TPD52L1 TRMT11 chr6 126307768 + TPD52L1 chr6 125541223 + Exonic hg19 BRCA TCGA-S3-AA15 2 Out-of-Frame Intra-chr q22.32 q22.31 Seq+ 2427 ChimerSeq FusionScan TCGA_RNA-Seq THOC7-LRIG1 THOC7 chr3 63849447 - LRIG1 chr3 66512933 - Exonic hg19 BRCA TCGA-AC-A3OD 6 Out-of-Frame Intra-chr p14.1 Tumor suppressor gene Seq+ 2428 ChimerSeq FusionScan TCGA_RNA-Seq TIAM1-FBLIM1 TIAM1 chr21 32711557 - FBLIM1 chr1 16111042 + Exonic hg19 BRCA TCGA-AC-A3OD 2 5'UTR-CDS Inter-chr q22.11 p36.21 Seq+ 2429 ChimerSeq FusionScan TCGA_RNA-Seq MAPKAP1-ANKMY2 MAPKAP1 chr9 128469249 - ANKMY2 chr7 16655529 - Exonic hg19 BRCA TCGA-A2-A0YF 2 5'UTR-CDS Inter-chr q33.3 p21.1 2430 ChimerSeq FusionScan TCGA_RNA-Seq SMG1-TMC5 SMG1 chr16 18890816 - TMC5 chr16 19490752 + Exonic hg19 BRCA TCGA-E9-A1N8 4 In-Frame Intra-chr p12.3 Atypical:PIKK p12.3 2431 ChimerSeq FusionScan TCGA_RNA-Seq HEATR6-WEE1 HEATR6 chr17 58149575 - WEE1 chr11 9603078 + Exonic hg19 BRCA TCGA-E9-A1N8 2 Out-of-Frame Inter-chr q23.1 p15.4 Seq+ 2432 ChimerSeq FusionScan TCGA_RNA-Seq PIEZO1-APRT PIEZO1 chr16 88792691 - APRT chr16 88876248 - Exonic hg19 BRCA TCGA-A8-A09M 3 Out-of-Frame Intra-chr q24.3 q24.3 Seq+ 2433 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-A8-A09M 2 5'UTR-5'UTR Inter-chr p13.2 p22 2434 ChimerSeq FusionScan TCGA_RNA-Seq TMLHE-SP1 TMLHE chrX 154736558 - SP1 chr12 53775442 + Exonic hg19 BRCA TCGA-AC-A3YI 2 Out-of-Frame Inter-chr q28 q13.13 Transcription factor 2435 ChimerSeq FusionScan TCGA_RNA-Seq NCOR2-TSPO NCOR2 chr12 124856567 - TSPO chr22 43555215 + Exonic hg19 BRCA TCGA-AC-A3YI 2 CDS-5'UTR Inter-chr q24.31 q13.2 2436 ChimerSeq FusionScan TCGA_RNA-Seq LRP12-MYO18B LRP12 chr8 105601046 - MYO18B chr22 26222375 + Exonic hg19 BRCA TCGA-AC-A3YI 2 In-Frame Inter-chr q22.3 q12.1 Tumor suppressor gene 2437 ChimerSeq FusionScan TCGA_RNA-Seq SCFD2-FIP1L1 SCFD2 chr4 54139992 - FIP1L1 chr4 54265896 + Exonic hg19 BRCA TCGA-AC-A3YI 2 In-Frame Intra-chr q12 q12 Seq+ 2438 ChimerSeq FusionScan TCGA_RNA-Seq HSP90AA1-RC3H2 HSP90AA1 chr14 102568211 - RC3H2 chr9 125645658 - Exonic hg19 BRCA TCGA-AC-A3YI 2 Out-of-Frame Inter-chr q32.31 Oncogene q33.2 2439 ChimerSeq FusionScan TCGA_RNA-Seq GIGYF2-EIF4E2 GIGYF2 chr2 233599948 + EIF4E2 chr2 233421125 + Exonic hg19 BRCA TCGA-D8-A140 4 In-Frame Intra-chr q37.1 q37.1 Seq+ 2440 ChimerSeq FusionScan TCGA_RNA-Seq NSD1-ZNF346 NSD1 chr5 176619020 + ZNF346 chr5 176489058 + Exonic hg19 BRCA TCGA-D8-A140 3 In-Frame Intra-chr q35.3 Oncogene q35.2 Transcription factor Seq+ 2441 ChimerSeq FusionScan TCGA_RNA-Seq FCHSD2-FAM168A FCHSD2 chr11 72578909 - FAM168A chr11 73179537 - Exonic hg19 BRCA TCGA-D8-A140 3 CDS-5'UTR Intra-chr q13.4 q13.4 Seq+ 2442 ChimerSeq FusionScan TCGA_RNA-Seq OLFM2-CEP112 OLFM2 chr19 10046979 - CEP112 chr17 63685336 - Exonic hg19 BRCA TCGA-D8-A140 2 In-Frame Inter-chr p13.2 q24.1 Seq+ 2443 ChimerSeq FusionScan TCGA_RNA-Seq NCSTN-CCT3 NCSTN chr1 160324080 + CCT3 chr1 156290816 - Exonic hg19 BRCA TCGA-D8-A140 2 In-Frame Intra-chr q23.2 q22 Seq+ 2444 ChimerSeq FusionScan TCGA_RNA-Seq SDHAF2-RIN1 SDHAF2 chr11 61197654 + RIN1 chr11 66101129 - Exonic hg19 BRCA TCGA-A8-A06N 4 Out-of-Frame Intra-chr q12.2 q13.2 Seq+ 2445 ChimerSeq FusionScan TCGA_RNA-Seq TOM1-PITPNB TOM1 chr22 35695973 + PITPNB chr22 28293880 - Exonic hg19 BRCA TCGA-A8-A06N 2 Out-of-Frame Intra-chr q12.3 q12.1 Seq+ 2446 ChimerSeq FusionScan TCGA_RNA-Seq SEPT9-EWSR1 SEPT9 chr17 75398785 + EWSR1 chr22 29674018 + Exonic hg19 BRCA TCGA-A2-A0EP 2 In-Frame Inter-chr q12.2 2447 ChimerSeq FusionScan TCGA_RNA-Seq HARS-CLINT1 HARS chr5 140070439 - CLINT1 chr5 157221980 - Exonic hg19 BRCA TCGA-A2-A0EP 2 Out-of-Frame Intra-chr q31.3 q33.3 Seq+ 2448 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF37-ETF1 ARHGEF37 chr5 148961187 + ETF1 chr5 137854556 - Exonic hg19 BRCA TCGA-A2-A0EP 2 5'UTR-CDS Intra-chr q32 q31.2 Seq+ 2449 ChimerSeq FusionScan TCGA_RNA-Seq GTF3C4-LMX1B GTF3C4 chr9 135559080 + LMX1B chr9 129453114 + Exonic hg19 BRCA TCGA-BH-A0BP 4 In-Frame Intra-chr q34.13 q33.3 Transcription factor Seq+ 2450 ChimerSeq FusionScan TCGA_RNA-Seq ALCAM-YIF1B ALCAM chr3 105086325 + YIF1B chr19 38800283 - Exonic hg19 BRCA TCGA-BH-A0BP 3 In-Frame Inter-chr q13.11 q13.2 Seq+ 2451 ChimerSeq FusionScan TCGA_RNA-Seq SIRT6-CERS4 SIRT6 chr19 4175676 - CERS4 chr19 8315959 + Exonic hg19 BRCA TCGA-BH-A0BP 2 CDS-5'UTR Intra-chr p13.3 Tumor suppressor gene p13.2 Seq+ 2452 ChimerSeq FusionScan TCGA_RNA-Seq BTBD1-MESP1 BTBD1 chr15 83710479 - MESP1 chr15 90293458 - Exonic hg19 BRCA TCGA-BH-A0BP 2 Out-of-Frame Intra-chr q25.2 q26.1 Transcription factor Seq+ 2453 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BRCA TCGA-D8-A1JG 2 Out-of-Frame Intra-chr q22.2 q22.2 2454 ChimerSeq FusionScan TCGA_RNA-Seq PBXIP1-ACBD6 PBXIP1 chr1 154928544 - ACBD6 chr1 180283857 - Exonic hg19 BRCA TCGA-BH-A8FY 3 5'UTR-CDS Intra-chr q21.3 q25.3 Seq+ 2455 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D15-THAP2 TBC1D15 chr12 72233591 + THAP2 chr12 72067982 + Exonic hg19 BRCA TCGA-E2-A1IO 2 Out-of-Frame Intra-chr q21.1 q21.1 Transcription factor 2456 ChimerSeq FusionScan TCGA_RNA-Seq EAF1-MORF4L1 EAF1 chr3 15473730 + MORF4L1 chr15 79170554 + Exonic hg19 BRCA TCGA-D8-A1J8 2 Out-of-Frame Inter-chr p25.1 Tumor suppressor gene q25.1 2457 ChimerSeq FusionScan TCGA_RNA-Seq BAG6-LY6G5C BAG6 chr6 31616453 - LY6G5C chr6 31644897 - Exonic hg19 BRCA TCGA-AN-A0AL 12 5'UTR-5'UTR Intra-chr p21.33 Seq+ 2458 ChimerSeq FusionScan TCGA_RNA-Seq TRMU-TTC38 TRMU chr22 46733841 + TTC38 chr22 46688687 + Exonic hg19 BRCA TCGA-AN-A0AL 2 In-Frame Intra-chr q13.31 q13.31 Seq+ 2459 ChimerSeq FusionScan TCGA_RNA-Seq SEC23A-PSMC1 SEC23A chr14 39565101 - PSMC1 chr14 90738616 + Exonic hg19 BRCA TCGA-E2-A15P 2 Out-of-Frame Intra-chr q21.1 q32.11 Seq+ 2460 ChimerSeq FusionScan TCGA_RNA-Seq GNAQ-C9orf64 GNAQ chr9 80409378 - C9orf64 chr9 86559904 - Exonic hg19 BRCA TCGA-E2-A159 2 In-Frame Intra-chr q21.2 Oncogene q21.32 Seq+ 2461 ChimerSeq FusionScan TCGA_RNA-Seq RECQL5-WBP2 RECQL5 chr17 73647265 - WBP2 chr17 73847757 - Exonic hg19 BRCA TCGA-A2-A04R 3 In-Frame Intra-chr q25.1 q25.1 Seq+ 2462 ChimerSeq FusionScan TCGA_RNA-Seq HMGN1-BRWD1 HMGN1 chr21 40717071 - BRWD1 chr21 40627754 - Exonic hg19 BRCA TCGA-C8-A138 2 Out-of-Frame Intra-chr q22.2 q22.2 2463 ChimerSeq FusionScan TCGA_RNA-Seq IPO7-RENBP IPO7 chr11 9430186 + RENBP chrX 153201029 - Exonic hg19 BRCA TCGA-A8-A08G 4 Out-of-Frame Inter-chr p15.4 q28 Seq+ 2464 ChimerSeq FusionScan TCGA_RNA-Seq CHID1-IGF1R CHID1 chr11 900935 - IGF1R chr15 99250790 + Exonic hg19 BRCA TCGA-A8-A08G 2 In-Frame Inter-chr p15.5 q26.3 TK:InsR Oncogene 2465 ChimerSeq FusionScan TCGA_RNA-Seq TPD52L1-HDDC2 TPD52L1 chr6 125475116 + HDDC2 chr6 125614055 - Exonic hg19 BRCA TCGA-A8-A08G 2 Out-of-Frame Intra-chr q22.31 q22.31 2466 ChimerSeq FusionScan TCGA_RNA-Seq PRCC-HAPLN2 PRCC chr1 156738031 + HAPLN2 chr1 156593258 + Exonic hg19 BRCA TCGA-BH-A0BZ 3 CDS-5'UTR Intra-chr q23.1 q23.1 Seq+ 2467 ChimerSeq FusionScan TCGA_RNA-Seq FLAD1-UBAP2L FLAD1 chr1 154955873 + UBAP2L chr1 154199757 + Exonic hg19 BRCA TCGA-BH-A0BZ 2 5'UTR-CDS Intra-chr q21.3 q21.3 Seq+ 2468 ChimerSeq FusionScan TCGA_RNA-Seq NAIP-GTF2H2D NAIP chr5 70275695 - GTF2H2D chr5 68874538 + Exonic hg19 BRCA TCGA-OL-A66K 2 Out-of-Frame Intra-chr q13.2 2469 ChimerSeq FusionScan TCGA_RNA-Seq FGFR2-ENPP2 FGFR2 chr10 123274630 - ENPP2 chr8 120650767 - Exonic hg19 BRCA TCGA-LD-A7W5 4 In-Frame Inter-chr q26.13 TK:FGFR Oncogene q24.12 Seq+ 2470 ChimerSeq FusionScan TCGA_RNA-Seq VDAC2-TYSND1 VDAC2 chr10 76989459 + TYSND1 chr10 71899897 - Exonic hg19 BRCA TCGA-LD-A7W5 3 In-Frame Intra-chr q22.2 q22.1 Seq+ 2471 ChimerSeq FusionScan TCGA_RNA-Seq DCAF7-VMP1 DCAF7 chr17 61628176 + VMP1 chr17 57808781 + Exonic hg19 BRCA TCGA-BH-A18R 9 CDS-5'UTR Intra-chr q23.3 q23.1 Seq+ 2472 ChimerSeq FusionScan TCGA_RNA-Seq LUC7L3-C17orf64 LUC7L3 chr17 48814387 + C17orf64 chr17 58506722 + Exonic hg19 BRCA TCGA-BH-A18R 9 Out-of-Frame Intra-chr q21.33 q23.2 Seq+ 2473 ChimerSeq FusionScan TCGA_RNA-Seq WIPF2-USP32 WIPF2 chr17 38375744 + USP32 chr17 58422969 - Exonic hg19 BRCA TCGA-BH-A18R 6 5'UTR-CDS Intra-chr q21.2 q23.2 Seq+ 2474 ChimerSeq FusionScan TCGA_RNA-Seq PGS1-KIF22 PGS1 chr17 76374889 + KIF22 chr16 29808213 + Exonic hg19 BRCA TCGA-BH-A18R 3 Out-of-Frame Inter-chr q25.3 p11.2 Seq+ 2475 ChimerSeq FusionScan TCGA_RNA-Seq SUZ12-USP32 SUZ12 chr17 30264539 + USP32 chr17 58332619 - Exonic hg19 BRCA TCGA-BH-A18R 2 Out-of-Frame Intra-chr q11.2 Tumor suppressor gene q23.2 2476 ChimerSeq FusionScan TCGA_RNA-Seq DCAF7-VMP1 DCAF7 chr17 61628176 + VMP1 chr17 57842331 + Exonic hg19 BRCA TCGA-BH-A18R 2 In-Frame Intra-chr q23.3 q23.1 Seq+ 2477 ChimerSeq FusionScan TCGA_RNA-Seq BCAS3-RNF169 BCAS3 chr17 58786686 + RNF169 chr11 74521228 + Exonic hg19 BRCA TCGA-BH-A18R 2 In-Frame Inter-chr q23.2 q13.4 Seq+ 2478 ChimerSeq FusionScan TCGA_RNA-Seq KDM4B-C19orf44 KDM4B chr19 5016350 + C19orf44 chr19 16611602 + Exonic hg19 BRCA TCGA-A7-A13E 3 5'UTR-5'UTR Intra-chr p13.3 p13.11 Seq+ 2479 ChimerSeq FusionScan TCGA_RNA-Seq SLC39A3-PPAP2C SLC39A3 chr19 2737045 - PPAP2C chr19 288171 - Exonic hg19 BRCA TCGA-A7-A13E 2 Out-of-Frame Intra-chr p13.3 Seq+ 2480 ChimerSeq FusionScan TCGA_RNA-Seq USP34-WDR92 USP34 chr2 61697784 - WDR92 chr2 68374699 - Exonic hg19 BRCA TCGA-E2-A1II 4 Out-of-Frame Intra-chr p15 p14 Seq+ 2481 ChimerSeq FusionScan TCGA_RNA-Seq MRS2-FAM65B MRS2 chr6 24403464 + FAM65B chr6 24876045 - Exonic hg19 BRCA TCGA-E2-A1II 2 CDS-5'UTR Intra-chr p22.3 Seq+ 2482 ChimerSeq FusionScan TCGA_RNA-Seq NUCKS1-SLC26A9 NUCKS1 chr1 205719084 - SLC26A9 chr1 205902212 - Exonic hg19 BRCA TCGA-E2-A1B0 4 In-Frame Intra-chr q32.1 q32.1 Seq+ 2483 ChimerSeq FusionScan TCGA_RNA-Seq ALCAM-C3orf26 ALCAM chr3 105086325 + C3orf26 chr3 99865816 + Exonic hg19 BRCA TCGA-E2-A1B0 2 In-Frame Intra-chr q13.11 2484 ChimerSeq FusionScan TCGA_RNA-Seq ANAPC1-ACTR3 ANAPC1 chr2 112588862 - ACTR3 chr2 114697535 + Exonic hg19 BRCA TCGA-E2-A1B0 2 In-Frame Intra-chr q13 Tumor suppressor gene q14.1 2485 ChimerSeq FusionScan TCGA_RNA-Seq PPFIA1-C11orf24 PPFIA1 chr11 70118542 + C11orf24 chr11 68030386 - Exonic hg19 BRCA TCGA-AR-A24V 2 Out-of-Frame Intra-chr q13.3 q13.2 Seq+ 2486 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-CACNA1C TBL1XR1 chr3 176816253 - CACNA1C chr12 2721068 + Exonic hg19 BRCA TCGA-D8-A27V 5 5'UTR-CDS Inter-chr q26.32 p13.33 Seq+ 2487 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-CACNA1C TBL1XR1 chr3 176914908 - CACNA1C chr12 2721068 + Exonic hg19 BRCA TCGA-D8-A27V 4 5'UTR-CDS Inter-chr q26.32 p13.33 Seq+ 2488 ChimerSeq FusionScan TCGA_RNA-Seq SLC7A1-B4GALT4 SLC7A1 chr13 30169552 - B4GALT4 chr3 118955917 - Exonic hg19 BRCA TCGA-D8-A27V 2 5'UTR-5'UTR Inter-chr q12.3 q13.32 Seq+ 2489 ChimerSeq FusionScan TCGA_RNA-Seq GON4L-IQGAP3 GON4L chr1 155823066 - IQGAP3 chr1 156510708 - Exonic hg19 BRCA TCGA-EW-A1OW 4 In-Frame Intra-chr q22 q22 Seq+ 2490 ChimerSeq FusionScan TCGA_RNA-Seq RNF220-TMEM53 RNF220 chr1 45115629 + TMEM53 chr1 45120881 - Exonic hg19 BRCA TCGA-EW-A1OW 2 In-Frame Intra-chr p34.1 p34.1 Seq+ 2491 ChimerSeq FusionScan TCGA_RNA-Seq MYL12B-ACAP1 MYL12B chr18 3262235 + ACAP1 chr17 7245266 + Exonic hg19 BRCA TCGA-E2-A1L9 3 5'UTR-CDS Inter-chr p11.31 p13.1 Seq+ 2492 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-E2-A1L9 2 5'UTR-5'UTR Inter-chr p13.2 p22 2493 ChimerSeq FusionScan TCGA_RNA-Seq KDM2A-PPP6R3 KDM2A chr11 66888829 + PPP6R3 chr11 68363564 + Exonic hg19 BRCA TCGA-AO-A0J3 7 Out-of-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 2494 ChimerSeq FusionScan TCGA_RNA-Seq ELN-METTL2B ELN chr7 73442599 + METTL2B chr7 128133857 + Exonic hg19 BRCA TCGA-AO-A0J3 5 Out-of-Frame Intra-chr q11.23 q32.1 Seq+ 2495 ChimerSeq FusionScan TCGA_RNA-Seq CCT3-SYT2 CCT3 chr1 156303337 - SYT2 chr1 202574917 - Exonic hg19 BRCA TCGA-AO-A0J3 3 CDS-5'UTR Intra-chr q22 q32.1 Seq+ 2496 ChimerSeq FusionScan TCGA_RNA-Seq ELN-METTL2A ELN chr7 73442599 + METTL2A chr17 60525061 + Exonic hg19 BRCA TCGA-AO-A0J3 2 In-Frame Inter-chr q11.23 q23.2 Seq+ 2497 ChimerSeq FusionScan TCGA_RNA-Seq PROSC-SET PROSC chr8 37623873 + SET chr9 131453448 + Exonic hg19 BRCA TCGA-AO-A0J3 2 In-Frame Inter-chr q34.11 2498 ChimerSeq FusionScan TCGA_RNA-Seq ELN-METTL2B ELN chr7 73442599 + METTL2B chr7 128140956 + Exonic hg19 BRCA TCGA-AO-A0J3 2 In-Frame Intra-chr q11.23 q32.1 Seq+ 2499 ChimerSeq FusionScan TCGA_RNA-Seq CRHR1-KDM2A CRHR1 chr17 43699407 + KDM2A chr11 66888704 + Exonic hg19 BRCA TCGA-AO-A0J3 2 5'UTR-5'UTR Inter-chr q21.31 q13.2 Transcription factor 2500 ChimerSeq FusionScan TCGA_RNA-Seq KRAS-KIAA0528 KRAS chr12 25398207 - KIAA0528 chr12 22610095 - Exonic hg19 BRCA TCGA-AR-A2LM 3 Out-of-Frame Intra-chr p12.1 Oncogene 2501 ChimerSeq FusionScan TCGA_RNA-Seq FCHSD2-CPT1A FCHSD2 chr11 72794739 - CPT1A chr11 68564401 - Exonic hg19 BRCA TCGA-BH-A18I 3 In-Frame Intra-chr q13.4 q13.3 Seq+ 2502 ChimerSeq FusionScan TCGA_RNA-Seq BAG4-PLEKHA2 BAG4 chr8 38065284 + PLEKHA2 chr8 38775424 + Exonic hg19 BRCA TCGA-BH-A18I 2 CDS-5'UTR Intra-chr p11.23 p11.22 Seq+ 2503 ChimerSeq FusionScan TCGA_RNA-Seq FCHSD2-CPT1A FCHSD2 chr11 72794739 - CPT1A chr11 68562379 - Exonic hg19 BRCA TCGA-BH-A18I 2 In-Frame Intra-chr q13.4 q13.3 Seq+ 2504 ChimerSeq FusionScan TCGA_RNA-Seq CTTN-PSME2 CTTN chr11 70244720 + PSME2 chr14 24612880 - Exonic hg19 BRCA TCGA-A2-A0EQ 8 5'UTR-CDS Inter-chr q13.3 q12 Seq+ 2505 ChimerSeq FusionScan TCGA_RNA-Seq CTTN-FAM158A CTTN chr11 70244720 + FAM158A chr14 24610525 - Exonic hg19 BRCA TCGA-A2-A0EQ 4 5'UTR-5'UTR Inter-chr q13.3 2506 ChimerSeq FusionScan TCGA_RNA-Seq TDG-STAB2 TDG chr12 104359838 + STAB2 chr12 104155077 + Exonic hg19 BRCA TCGA-AO-A1KQ 3 Out-of-Frame Intra-chr q23.3 q23.3 Seq+ 2507 ChimerSeq FusionScan TCGA_RNA-Seq ATE1-ZRANB1 ATE1 chr10 123681863 - ZRANB1 chr10 126670277 + Exonic hg19 BRCA TCGA-E9-A229 2 In-Frame Intra-chr q26.13 q26.13 Seq+ 2508 ChimerSeq FusionScan TCGA_RNA-Seq DLG5-PCDH15 DLG5 chr10 79685974 - PCDH15 chr10 56287637 - Exonic hg19 BRCA TCGA-E9-A229 2 In-Frame Intra-chr q22.3 q21.1 Seq+ 2509 ChimerSeq FusionScan TCGA_RNA-Seq ATP2A3-FGF3 ATP2A3 chr17 3832621 - FGF3 chr11 69625468 - Exonic hg19 BRCA TCGA-A2-A0CT 4 In-Frame Inter-chr p13.2 q13.3 Seq+ 2510 ChimerSeq FusionScan TCGA_RNA-Seq SYCP2-ZMYND8 SYCP2 chr20 58467044 - ZMYND8 chr20 45927691 - Exonic hg19 BRCA TCGA-A2-A0CT 2 In-Frame Intra-chr q13.33 q13.12 Seq+ 2511 ChimerSeq FusionScan TCGA_RNA-Seq SLC44A1-RAD23B SLC44A1 chr9 108123611 + RAD23B chr9 110068659 + Exonic hg19 BRCA TCGA-EW-A3U0 3 In-Frame Intra-chr q31.1 q31.2 Tumor suppressor gene Seq+ 2512 ChimerSeq FusionScan TCGA_RNA-Seq RFX3-GLDC RFX3 chr9 3525746 - GLDC chr9 6565429 - Exonic hg19 BRCA TCGA-EW-A3U0 3 5'UTR-CDS Intra-chr p24.2 Transcription factor p24.1 Seq+ 2513 ChimerSeq FusionScan TCGA_RNA-Seq RRM1-STIM1 RRM1 chr11 4116261 + STIM1 chr11 4107706 + Exonic hg19 BRCA TCGA-EW-A3U0 3 3'UTR-CDS Intra-chr p15.4 Oncogene p15.4 Seq+ 2514 ChimerSeq FusionScan TCGA_RNA-Seq MED25-AP2A1 MED25 chr19 50321873 + AP2A1 chr19 50285013 + Exonic hg19 BRCA TCGA-EW-A3U0 2 Out-of-Frame Intra-chr q13.33 q13.33 Seq+ 2515 ChimerSeq FusionScan TCGA_RNA-Seq MED25-AP2A1 MED25 chr19 50322553 + AP2A1 chr19 50285013 + Exonic hg19 BRCA TCGA-EW-A3U0 2 Out-of-Frame Intra-chr q13.33 q13.33 Seq+ 2516 ChimerSeq FusionScan TCGA_RNA-Seq PTPLAD1-ANKDD1A PTPLAD1 chr15 65823056 + ANKDD1A chr15 65223019 + Exonic hg19 BRCA TCGA-EW-A3U0 2 In-Frame Intra-chr q22.31 Seq+ 2517 ChimerSeq FusionScan TCGA_RNA-Seq TRA2A-HECW1 TRA2A chr7 23561325 - HECW1 chr7 43351361 + Exonic hg19 BRCA TCGA-EW-A3U0 2 Out-of-Frame Intra-chr p15.3 p14.1 Seq+ 2518 ChimerSeq FusionScan TCGA_RNA-Seq ALG8-NARS2 ALG8 chr11 77815025 - NARS2 chr11 78204241 - Exonic hg19 BRCA TCGA-A2-A0T4 6 In-Frame Intra-chr q14.1 q14.1 Seq+ 2519 ChimerSeq FusionScan TCGA_RNA-Seq FRK-DTNBP1 FRK chr6 116381130 - DTNBP1 chr6 15533626 - Exonic hg19 BRCA TCGA-AQ-A1H2 2 Out-of-Frame Intra-chr q22.1 TK:Src Tumor suppressor gene p22.3 Seq+ 2520 ChimerSeq FusionScan TCGA_RNA-Seq EEF2K-UQCRC2 EEF2K chr16 22218000 + UQCRC2 chr16 21991867 + Exonic hg19 BRCA TCGA-E2-A14N 2 5'UTR-CDS Intra-chr p12.2 Seq+ 2521 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-DAP3 RCC1 chr1 28832596 + DAP3 chr1 155695172 + Exonic hg19 BRCA TCGA-E2-A14N 2 5'UTR-CDS Intra-chr p35.3 q22 Seq+ 2522 ChimerSeq FusionScan TCGA_RNA-Seq MED13L-ANKRD13A MED13L chr12 116401211 - ANKRD13A chr12 110449809 + Exonic hg19 BRCA TCGA-E2-A14N 2 Out-of-Frame Intra-chr q24.21 q24.11 Seq+ 2523 ChimerSeq FusionScan TCGA_RNA-Seq WDR45L-SEPT4 WDR45L chr17 80583264 - SEPT4 chr17 56599462 - Exonic hg19 BRCA TCGA-AN-A0FT 4 Out-of-Frame Intra-chr q22 Tumor suppressor gene Seq+ 2524 ChimerSeq FusionScan TCGA_RNA-Seq SSH2-LBP SSH2 chr17 28022476 - LBP chr20 37002580 + Exonic hg19 BRCA TCGA-AN-A0FT 2 Out-of-Frame Inter-chr q11.2 q11.23 Seq+ 2525 ChimerSeq FusionScan TCGA_RNA-Seq ACOT7-RPL22 ACOT7 chr1 6387358 - RPL22 chr1 6253114 - Exonic hg19 BRCA TCGA-AN-A0FT 2 Out-of-Frame Intra-chr p36.31 p36.31 2526 ChimerSeq FusionScan TCGA_RNA-Seq ADPRHL2-SHPK ADPRHL2 chr1 36554716 + SHPK chr17 3533640 - Exonic hg19 BRCA TCGA-AR-A5QP 2 Out-of-Frame Inter-chr p34.3 p13.2 Seq+ 2527 ChimerSeq FusionScan TCGA_RNA-Seq EIF2S2-DEFB123 EIF2S2 chr20 32699901 - DEFB123 chr20 30037831 + Exonic hg19 BRCA TCGA-C8-A273 11 Out-of-Frame Intra-chr q11.22 q11.21 Seq+ 2528 ChimerSeq FusionScan TCGA_RNA-Seq TOP1-C17orf64 TOP1 chr20 39729993 + C17orf64 chr17 58503143 + Exonic hg19 BRCA TCGA-C8-A273 5 In-Frame Inter-chr q12 Oncogene q23.2 Seq+ 2529 ChimerSeq FusionScan TCGA_RNA-Seq ZFP28-SLC9A8 ZFP28 chr19 57061974 + SLC9A8 chr20 48456077 + Exonic hg19 BRCA TCGA-C8-A273 5 In-Frame Inter-chr q13.43 Transcription factor q13.13 Seq+ 2530 ChimerSeq FusionScan TCGA_RNA-Seq PARD6B-CASS4 PARD6B chr20 49354616 + CASS4 chr20 55020955 + Exonic hg19 BRCA TCGA-C8-A273 4 Out-of-Frame Intra-chr q13.13 q13.31 Seq+ 2531 ChimerSeq FusionScan TCGA_RNA-Seq RALY-EIF2S2 RALY chr20 32581937 + EIF2S2 chr20 32691371 - Exonic hg19 BRCA TCGA-C8-A273 2 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 2532 ChimerSeq FusionScan TCGA_RNA-Seq CPD-SKAP1 CPD chr17 28712254 + SKAP1 chr17 46474147 - Exonic hg19 BRCA TCGA-C8-A273 2 In-Frame Intra-chr q11.2 Tumor suppressor gene q21.32 Seq+ 2533 ChimerSeq FusionScan TCGA_RNA-Seq SMARCD2-HCK SMARCD2 chr17 61919818 - HCK chr20 30659464 + Exonic hg19 BRCA TCGA-C8-A273 2 Out-of-Frame Inter-chr q23.3 q11.21 TK:Src Seq+ 2534 ChimerSeq FusionScan TCGA_RNA-Seq A2LD1-KIAA0226L A2LD1 chr13 101240994 - KIAA0226L chr13 46946732 - Exonic hg19 BRCA TCGA-A7-A26F 2 5'UTR-5'UTR Intra-chr 2535 ChimerSeq FusionScan TCGA_RNA-Seq COL18A1-HNRNPH1 COL18A1 chr21 46888700 + HNRNPH1 chr5 179048398 - Exonic hg19 BRCA TCGA-A7-A26F 2 Out-of-Frame Inter-chr q22.3 q35.3 2536 ChimerSeq FusionScan TCGA_RNA-Seq ELL2-SPATA9 ELL2 chr5 95297278 - SPATA9 chr5 94999752 - Exonic hg19 BRCA TCGA-A7-A26F 2 In-Frame Intra-chr q15 q15 Seq+ 2537 ChimerSeq FusionScan TCGA_RNA-Seq TNFRSF10B-FAM192A TNFRSF10B chr8 22926263 - FAM192A chr16 57207781 - Exonic hg19 BRCA TCGA-A7-A26F 2 CDS-5'UTR Inter-chr p21.3 Tumor suppressor gene q13 2538 ChimerSeq FusionScan TCGA_RNA-Seq BCAS3-ABCA8 BCAS3 chr17 58885437 + ABCA8 chr17 66865920 - Exonic hg19 BRCA TCGA-EW-A1OX 2 In-Frame Intra-chr q23.2 q24.2 Seq+ 2539 ChimerSeq FusionScan TCGA_RNA-Seq MYH9-FOXRED2 MYH9 chr22 36737414 - FOXRED2 chr22 36889850 - Exonic hg19 BRCA TCGA-A8-A09Q 6 In-Frame Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Seq+ 2540 ChimerSeq FusionScan TCGA_RNA-Seq RAI1-IGF2BP1 RAI1 chr17 17627473 + IGF2BP1 chr17 47076470 + Exonic hg19 BRCA TCGA-A8-A09Q 5 5'UTR-CDS Intra-chr p11.2 q21.32 Seq+ 2541 ChimerSeq FusionScan TCGA_RNA-Seq NVL-NEK2 NVL chr1 224437913 - NEK2 chr1 211847855 - Exonic hg19 BRCA TCGA-A8-A09Q 4 In-Frame Intra-chr q42.11 q32.3 Other:NEK Seq+ 2542 ChimerSeq FusionScan TCGA_RNA-Seq CHFR-OSBPL8 CHFR chr12 133463781 - OSBPL8 chr12 76881398 - Exonic hg19 BRCA TCGA-A8-A09Q 3 CDS-5'UTR Intra-chr q24.33 Tumor suppressor gene q21.2 Seq+ 2543 ChimerSeq FusionScan TCGA_RNA-Seq RSBN1L-SHANK2 RSBN1L chr7 77379381 + SHANK2 chr11 70319544 - Exonic hg19 BRCA TCGA-A8-A09Q 3 Out-of-Frame Inter-chr q11.23 q13.4 Seq+ 2544 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPM-CERS4 HNRNPM chr19 8509995 + CERS4 chr19 8315959 + Exonic hg19 BRCA TCGA-A8-A09Q 3 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 2545 ChimerSeq FusionScan TCGA_RNA-Seq BRWD1-WDR4 BRWD1 chr21 40608520 - WDR4 chr21 44283706 - Exonic hg19 BRCA TCGA-A8-A09Q 3 Out-of-Frame Intra-chr q22.2 q22.3 Seq+ 2546 ChimerSeq FusionScan TCGA_RNA-Seq OPHN1-PIN4 OPHN1 chrX 67652708 - PIN4 chrX 71416634 + Exonic hg19 BRCA TCGA-A8-A09Q 2 Out-of-Frame Intra-chr q12 q13.1 2547 ChimerSeq FusionScan TCGA_RNA-Seq CYTH3-MAD1L1 CYTH3 chr7 6210165 - MAD1L1 chr7 1938026 - Exonic hg19 BRCA TCGA-A8-A09Q 2 In-Frame Intra-chr p22.1 p22.3 Tumor suppressor gene Seq+ 2548 ChimerSeq FusionScan TCGA_RNA-Seq REV3L-SOBP REV3L chr6 111726672 - SOBP chr6 107854662 + Exonic hg19 BRCA TCGA-A8-A09Q 2 In-Frame Intra-chr q21 q21 Seq+ 2549 ChimerSeq FusionScan TCGA_RNA-Seq WRB-NLK WRB chr21 40752412 + NLK chr17 26490568 + Exonic hg19 BRCA TCGA-A8-A09Q 2 Out-of-Frame Inter-chr q22.2 q11.2 CMGC:MAPK Seq+ 2550 ChimerSeq FusionScan TCGA_RNA-Seq NT5M-ZNF652 NT5M chr17 17209957 + ZNF652 chr17 47395345 - Exonic hg19 BRCA TCGA-A8-A09Q 2 CDS-5'UTR Intra-chr p11.2 q21.33 Transcription factor Seq+ 2551 ChimerSeq FusionScan TCGA_RNA-Seq IL6ST-DHX29 IL6ST chr5 55243320 - DHX29 chr5 54565465 - Exonic hg19 BRCA TCGA-A8-A09Q 2 Out-of-Frame Intra-chr q11.2 Oncogene q11.2 Seq+ 2552 ChimerSeq FusionScan TCGA_RNA-Seq STAU2-MSI2 STAU2 chr8 74650518 - MSI2 chr17 55334458 + Exonic hg19 BRCA TCGA-A8-A09Q 2 Out-of-Frame Inter-chr q21.11 q22 Seq+ 2553 ChimerSeq FusionScan TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23739997 - APOO chrX 23899069 - Exonic hg19 BRCA TCGA-A7-A13D 7 In-Frame Intra-chr p22.11 p22.11 Seq+ 2554 ChimerSeq FusionScan TCGA_RNA-Seq TMEM123-MMP27 TMEM123 chr11 102319542 - MMP27 chr11 102563772 - Exonic hg19 BRCA TCGA-A7-A13D 6 Out-of-Frame Intra-chr q22.2 q22.2 Seq+ 2555 ChimerSeq FusionScan TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23748643 - APOO chrX 23851627 - Exonic hg19 BRCA TCGA-A7-A13D 5 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 2556 ChimerSeq FusionScan TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23761241 - APOO chrX 23851627 - Exonic hg19 BRCA TCGA-A7-A13D 3 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 2557 ChimerSeq FusionScan TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23731251 - APOO chrX 23899069 - Exonic hg19 BRCA TCGA-A7-A13D 3 Out-of-Frame Intra-chr p22.11 p22.11 Seq+ 2558 ChimerSeq FusionScan TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23748643 - APOO chrX 23851729 - Exonic hg19 BRCA TCGA-A7-A13D 2 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 2559 ChimerSeq FusionScan TCGA_RNA-Seq SNHG8-CCDC57 SNHG8 chr4 119200292 + CCDC57 chr17 80059742 - Exonic hg19 BRCA TCGA-A7-A13D 2 5'UTR-CDS Inter-chr q26 q25.3 2560 ChimerSeq FusionScan TCGA_RNA-Seq PBX1-DISC1 PBX1 chr1 164532548 + DISC1 chr1 232094573 + Exonic hg19 BRCA TCGA-A7-A13D 2 In-Frame Intra-chr q23.3 Oncogene Transcription factor q42.2 Seq+ 2561 ChimerSeq FusionScan TCGA_RNA-Seq SRSF12-RNGTT SRSF12 chr6 89814837 - RNGTT chr6 89614674 - Exonic hg19 BRCA TCGA-A7-A13D 2 In-Frame Intra-chr q15 q15 2562 ChimerSeq FusionScan TCGA_RNA-Seq RFT1-DCP1A RFT1 chr3 53137968 - DCP1A chr3 53353500 - Exonic hg19 BRCA TCGA-A7-A13D 2 In-Frame Intra-chr p21.1 p21.1 Seq+ 2563 ChimerSeq FusionScan TCGA_RNA-Seq PARN-RRN3 PARN chr16 14711446 - RRN3 chr16 15178562 - Exonic hg19 BRCA TCGA-A7-A13D 2 In-Frame Intra-chr p13.11 Seq+ 2564 ChimerSeq FusionScan TCGA_RNA-Seq ZBED4-SPAG4 ZBED4 chr22 50247637 + SPAG4 chr20 34207116 + Exonic hg19 BRCA TCGA-BH-A0H7 7 5'UTR-CDS Inter-chr q13.33 Transcription factor q11.22 Seq+ 2565 ChimerSeq FusionScan TCGA_RNA-Seq TAF4-LARGE TAF4 chr20 60585101 - LARGE chr22 34252790 - Exonic hg19 BRCA TCGA-BH-A0H7 3 CDS-5'UTR Inter-chr Seq+ 2566 ChimerSeq FusionScan TCGA_RNA-Seq C20orf43-TSHZ2 C20orf43 chr20 55059245 + TSHZ2 chr20 52103682 + Exonic hg19 BRCA TCGA-BH-A0H7 3 CDS-3'UTR Intra-chr q13.2 Transcription factor Seq+ 2567 ChimerSeq FusionScan TCGA_RNA-Seq FBXO46-SYMPK FBXO46 chr19 46234106 - SYMPK chr19 46338486 - Exonic hg19 BRCA TCGA-BH-A0H7 3 5'UTR-CDS Intra-chr q13.32 q13.32 Seq+ 2568 ChimerSeq FusionScan TCGA_RNA-Seq RBFOX2-NTSR1 RBFOX2 chr22 36424287 - NTSR1 chr20 61386036 + Exonic hg19 BRCA TCGA-BH-A0H7 2 In-Frame Inter-chr q13.33 Seq+ 2569 ChimerSeq FusionScan TCGA_RNA-Seq SPECC1L-TH1L SPECC1L chr22 24666951 + TH1L chr20 57561147 + Exonic hg19 BRCA TCGA-BH-A0H7 2 5'UTR-CDS Inter-chr q11.23 Seq+ 2570 ChimerSeq FusionScan TCGA_RNA-Seq ARFGAP1-UQCC ARFGAP1 chr20 61904272 + UQCC chr20 33981999 - Exonic hg19 BRCA TCGA-BH-A0H7 2 5'UTR-CDS Intra-chr q13.33 Seq+ 2571 ChimerSeq FusionScan TCGA_RNA-Seq KDM4B-UHRF1 KDM4B chr19 5144913 + UHRF1 chr19 4929233 + Exonic hg19 BRCA TCGA-BH-A0H7 2 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 2572 ChimerSeq FusionScan TCGA_RNA-Seq ATXN10-APPL1 ATXN10 chr22 46136418 + APPL1 chr3 57280103 + Exonic hg19 BRCA TCGA-BH-A0H7 2 In-Frame Inter-chr q13.31 p14.3 Seq+ 2573 ChimerSeq FusionScan TCGA_RNA-Seq SLMO2-PTPRT SLMO2 chr20 57617753 - PTPRT chr20 41514572 - Exonic hg19 BRCA TCGA-BH-A0H7 2 Out-of-Frame Intra-chr q13.11 Oncogene Tumor suppressor gene Seq+ 2574 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1274-EEF1D KIAA1274 chr10 72307202 + EEF1D chr8 144663498 - Exonic hg19 BRCA TCGA-AO-A1KR 2 In-Frame Inter-chr 2575 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-E2-A570 2 5'UTR-5'UTR Inter-chr p13.2 p22 2576 ChimerSeq FusionScan TCGA_RNA-Seq NOP56-GTF2H2D NOP56 chr20 2634039 + GTF2H2D chr5 68875583 + Exonic hg19 BRCA TCGA-E2-A570 2 In-Frame Inter-chr p13 2577 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP18-COX7A2 ARHGAP18 chr6 129932677 - COX7A2 chr6 75947704 - Exonic hg19 BRCA TCGA-A7-A3IY 2 Out-of-Frame Intra-chr q22.33 q14.1 2578 ChimerSeq FusionScan TCGA_RNA-Seq AP2A1-DHDH AP2A1 chr19 50270457 + DHDH chr19 49442705 + Exonic hg19 BRCA TCGA-A2-A25D 7 Out-of-Frame Intra-chr q13.33 q13.33 Seq+ 2579 ChimerSeq FusionScan TCGA_RNA-Seq STAT3-FAM134C STAT3 chr17 40490748 - FAM134C chr17 40739882 - Exonic hg19 BRCA TCGA-A2-A25D 3 In-Frame Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 2580 ChimerSeq FusionScan TCGA_RNA-Seq MTCH2-FNBP4 MTCH2 chr11 47660250 - FNBP4 chr11 47741638 - Exonic hg19 BRCA TCGA-A2-A25D 2 In-Frame Intra-chr p11.2 p11.2 Seq+ 2581 ChimerSeq FusionScan TCGA_RNA-Seq SF3B2-SART1 SF3B2 chr11 65820575 + SART1 chr11 65734729 + Exonic hg19 BRCA TCGA-GM-A2DO 2 In-Frame Intra-chr q13.1 q13.1 Seq+ 2582 ChimerSeq FusionScan TCGA_RNA-Seq PRPF4B-CDYL PRPF4B chr6 4021700 + CDYL chr6 4952499 + Exonic hg19 BRCA TCGA-BH-A0HB 4 Out-of-Frame Intra-chr p25.2 p25.1 Seq+ 2583 ChimerSeq FusionScan TCGA_RNA-Seq ANXA8L2-IQCA1 ANXA8L2 chr10 47747132 + IQCA1 chr2 237247025 - Exonic hg19 BRCA TCGA-BH-A0HB 2 In-Frame Inter-chr q37.3 2584 ChimerSeq FusionScan TCGA_RNA-Seq TRIM37-TUBD1 TRIM37 chr17 57181653 - TUBD1 chr17 57937785 - Exonic hg19 BRCA TCGA-BH-A0HB 2 Out-of-Frame Intra-chr q22 q23.1 Seq+ 2585 ChimerSeq FusionScan TCGA_RNA-Seq SREBF2-ACO2 SREBF2 chr22 42229362 + ACO2 chr22 41918833 + Exonic hg19 BRCA TCGA-BH-A0HY 5 CDS-5'UTR Intra-chr q13.2 Transcription factor q13.2 Seq+ 2586 ChimerSeq FusionScan TCGA_RNA-Seq ODZ4-INTS4 ODZ4 chr11 78600829 - INTS4 chr11 77594998 - Exonic hg19 BRCA TCGA-BH-A0HY 4 Out-of-Frame Intra-chr q14.1 Seq+ 2587 ChimerSeq FusionScan TCGA_RNA-Seq MAP4K5-NIN MAP4K5 chr14 50971517 - NIN chr14 51205004 - Exonic hg19 BRCA TCGA-BH-A0HY 2 Out-of-Frame Intra-chr q22.1 q22.1 Oncogene Seq+ 2588 ChimerSeq FusionScan TCGA_RNA-Seq DSCR3-TTC3 DSCR3 chr21 38639538 - TTC3 chr21 38480691 + Exonic hg19 BRCA TCGA-BH-A0HY 2 Out-of-Frame Intra-chr q22.13 q22.13 Seq+ 2589 ChimerSeq FusionScan TCGA_RNA-Seq SREBF2-ACO2 SREBF2 chr22 42229362 + ACO2 chr22 41916174 + Exonic hg19 BRCA TCGA-BH-A0HY 2 CDS-5'UTR Intra-chr q13.2 Transcription factor q13.2 Seq+ 2590 ChimerSeq FusionScan TCGA_RNA-Seq ITPK1-ACO1 ITPK1 chr14 93581413 - ACO1 chr9 32405482 + Exonic hg19 BRCA TCGA-BH-A0HY 2 CDS-5'UTR Inter-chr p21.1 Seq+ 2591 ChimerSeq FusionScan TCGA_RNA-Seq RYK-RABL3 RYK chr3 133921573 - RABL3 chr3 120417420 - Exonic hg19 BRCA TCGA-BH-A0DL 4 Out-of-Frame Intra-chr q22.2 TK:Ryk q13.33 Seq+ 2592 ChimerSeq FusionScan TCGA_RNA-Seq RLF-UBE2G1 RLF chr1 40688382 + UBE2G1 chr17 4210418 - Exonic hg19 BRCA TCGA-D8-A1XM 2 Out-of-Frame Inter-chr p34.2 Transcription factor p13.2 2593 ChimerSeq FusionScan TCGA_RNA-Seq PCMTD1-OMA1 PCMTD1 chr8 52758220 - OMA1 chr1 59002413 - Exonic hg19 BRCA TCGA-D8-A1XM 2 In-Frame Inter-chr q11.23 p32.1 2594 ChimerSeq FusionScan TCGA_RNA-Seq SCAMP2-SLC12A8 SCAMP2 chr15 75165539 - SLC12A8 chr3 124811042 - Exonic hg19 BRCA TCGA-D8-A27H 4 Out-of-Frame Inter-chr q24.1 q21.2 Seq+ 2595 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57842331 + Exonic hg19 BRCA TCGA-D8-A27H 2 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 2596 ChimerSeq FusionScan TCGA_RNA-Seq NFKBIB-LGALS7B NFKBIB chr19 39390851 + LGALS7B chr19 39281328 + Exonic hg19 BRCA TCGA-D8-A1JF 3 In-Frame Intra-chr Seq+ 2597 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-A7-A13G 6 5'UTR-5'UTR Inter-chr p13.2 p22 2598 ChimerSeq FusionScan TCGA_RNA-Seq ARL17B-KANSL1 ARL17B chr17 44430185 - KANSL1 chr17 44249598 - Exonic hg19 BRCA TCGA-A7-A13G 2 3'UTR-3'UTR Intra-chr 2599 ChimerSeq FusionScan TCGA_RNA-Seq HSDL2-FRMD3 HSDL2 chr9 115142460 + FRMD3 chr9 86004623 - Exonic hg19 BRCA TCGA-A2-A0EW 2 Out-of-Frame Intra-chr q32 q21.32 Seq+ 2600 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-A2-A0EW 2 5'UTR-5'UTR Inter-chr p13.2 p22 2601 ChimerSeq FusionScan TCGA_RNA-Seq PPFIA1-CBLB PPFIA1 chr11 70208594 + CBLB chr3 105459475 - Exonic hg19 BRCA TCGA-AQ-A04H 4 Out-of-Frame Inter-chr q13.3 q13.11 Seq+ 2602 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB1-RNF213 RPS6KB1 chr17 57970686 + RNF213 chr17 78345673 + Exonic hg19 BRCA TCGA-AQ-A04H 2 Out-of-Frame Intra-chr q23.1 Oncogene q25.3 Oncogene Seq+ 2603 ChimerSeq FusionScan TCGA_RNA-Seq PRIM2-COL21A1 PRIM2 chr6 57246966 + COL21A1 chr6 55929420 - Exonic hg19 BRCA TCGA-BH-A0BL 3 In-Frame Intra-chr p11.2 p12.1 Seq+ 2604 ChimerSeq FusionScan TCGA_RNA-Seq IGF2R-ACVR2A IGF2R chr6 160390427 + ACVR2A chr2 148672759 + Exonic hg19 BRCA TCGA-BH-A0BL 2 Out-of-Frame Inter-chr q25.3 Oncogene Tumor suppressor gene q22.3 Oncogene Seq+ 2605 ChimerSeq FusionScan TCGA_RNA-Seq MAGED1-GOPC MAGED1 chrX 51546213 + GOPC chr6 117900227 - Exonic hg19 BRCA TCGA-A2-A0YH 2 5'UTR-CDS Inter-chr p11.22 q22.1 2606 ChimerSeq FusionScan TCGA_RNA-Seq TGFB2-ZFYVE9 TGFB2 chr1 218520389 + ZFYVE9 chr1 52698842 + Exonic hg19 BRCA TCGA-A2-A0CM 2 CDS-5'UTR Intra-chr q41 p32.3 2607 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R3A-PCCB PPP2R3A chr3 135684691 + PCCB chr3 135974697 + Exonic hg19 BRCA TCGA-A2-A0CM 2 5'UTR-CDS Intra-chr q22.2 q22.3 Seq+ 2608 ChimerSeq FusionScan TCGA_RNA-Seq FXR1-VGLL4 FXR1 chr3 180630524 + VGLL4 chr3 11606493 - Exonic hg19 BRCA TCGA-A2-A0CM 2 Out-of-Frame Intra-chr q26.33 p25.2 Seq+ 2609 ChimerSeq FusionScan TCGA_RNA-Seq SH3GL1-RHOA SH3GL1 chr19 4400320 - RHOA chr3 49397815 - Exonic hg19 BRCA TCGA-A8-A08P 2 In-Frame Inter-chr p13.3 p21.31 Oncogene Tumor suppressor gene 2610 ChimerSeq FusionScan TCGA_RNA-Seq EDC3-SNX29 EDC3 chr15 74988220 - SNX29 chr16 12293457 + Exonic hg19 BRCA TCGA-B6-A0IM 5 5'UTR-CDS Inter-chr q24.1 p13.13 Seq+ 2611 ChimerSeq FusionScan TCGA_RNA-Seq CANT1-PSMD3 CANT1 chr17 77005745 - PSMD3 chr17 38140546 + Exonic hg19 BRCA TCGA-C8-A135 4 5'UTR-CDS Intra-chr q25.3 q21.1 Seq+ 2612 ChimerSeq FusionScan TCGA_RNA-Seq TMX2-C11orf80 TMX2 chr11 57480279 + C11orf80 chr11 66563751 + Exonic hg19 BRCA TCGA-C8-A135 2 In-Frame Intra-chr q12.1 q13.2 Seq+ 2613 ChimerSeq FusionScan TCGA_RNA-Seq NFYC-KCNQ4 NFYC chr1 41232375 + KCNQ4 chr1 41282936 + Exonic hg19 BRCA TCGA-C8-A135 2 Out-of-Frame Intra-chr p34.2 Transcription factor p34.2 2614 ChimerSeq FusionScan TCGA_RNA-Seq GNE-ERP27 GNE chr9 36276890 - ERP27 chr12 15073982 - Exonic hg19 BRCA TCGA-A2-A25F 6 In-Frame Inter-chr p13.3 p12.3 Seq+ 2615 ChimerSeq FusionScan TCGA_RNA-Seq SAV1-CDKL1 SAV1 chr14 51131896 - CDKL1 chr14 50825867 - Exonic hg19 BRCA TCGA-A2-A25F 3 Out-of-Frame Intra-chr q22.1 q22.1 CMGC:CDKL 2616 ChimerSeq FusionScan TCGA_RNA-Seq LANCL2-TFDP2 LANCL2 chr7 55469013 + TFDP2 chr3 141682805 - Exonic hg19 BRCA TCGA-A2-A25F 2 In-Frame Inter-chr p11.2 q23 Transcription factor Seq+ 2617 ChimerSeq FusionScan TCGA_RNA-Seq KANSL1-PHF20 KANSL1 chr17 44171925 - PHF20 chr20 34515701 + Exonic hg19 BRCA TCGA-A2-A25F 2 In-Frame Inter-chr q11.22 Transcription factor 2618 ChimerSeq FusionScan TCGA_RNA-Seq SMG1-MYH11 SMG1 chr16 18844261 - MYH11 chr16 15797980 - Exonic hg19 BRCA TCGA-A2-A04Q 8 In-Frame Intra-chr p12.3 Atypical:PIKK Oncogene Seq+ 2619 ChimerSeq FusionScan TCGA_RNA-Seq COG5-FOXP2 COG5 chr7 107167681 - FOXP2 chr7 114329836 + Exonic hg19 BRCA TCGA-AC-A2QH 2 Out-of-Frame Intra-chr q31.1 Transcription factor Seq+ 2620 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-AC-A2FE 2 5'UTR-5'UTR Inter-chr p13.2 p22 2621 ChimerSeq FusionScan TCGA_RNA-Seq CABLES1-FTO CABLES1 chr18 20716571 + FTO chr16 54145673 + Exonic hg19 BRCA TCGA-S3-AA12 7 In-Frame Inter-chr q11.2 Tumor suppressor gene q12.2 Seq+ 2622 ChimerSeq FusionScan TCGA_RNA-Seq GTF2E2-EIF4EBP1 GTF2E2 chr8 30510949 - EIF4EBP1 chr8 37914598 + Exonic hg19 BRCA TCGA-S3-AA12 3 In-Frame Intra-chr p12 p11.23 Seq+ 2623 ChimerSeq FusionScan TCGA_RNA-Seq TCF7L1-WIF1 TCF7L1 chr2 85361573 + WIF1 chr12 65471634 - Exonic hg19 BRCA TCGA-E2-A1LI 3 In-Frame Inter-chr p11.2 Oncogene Transcription factor q14.3 Tumor suppressor gene Seq+ 2624 ChimerSeq FusionScan TCGA_RNA-Seq MCCC1-MED10 MCCC1 chr3 182788786 - MED10 chr5 6372714 - Exonic hg19 BRCA TCGA-E2-A1LI 2 Out-of-Frame Inter-chr q27.1 p15.31 Seq+ 2625 ChimerSeq FusionScan TCGA_RNA-Seq DNAL4-DDX17 DNAL4 chr22 39190072 - DDX17 chr22 38897285 - Exonic hg19 BRCA TCGA-E2-A1LI 2 5'UTR-CDS Intra-chr q13.1 q13.1 2626 ChimerSeq FusionScan TCGA_RNA-Seq UBR4-ASAH1 UBR4 chr1 19518681 - ASAH1 chr8 17919932 - Exonic hg19 BRCA TCGA-AC-A2FG 2 In-Frame Inter-chr p36.13 p22 2627 ChimerSeq FusionScan TCGA_RNA-Seq KCNH7-SLC38A11 KCNH7 chr2 163693046 - SLC38A11 chr2 165796066 - Exonic hg19 BRCA TCGA-C8-A26Y 2 In-Frame Intra-chr q24.2 q24.3 Seq+ 2628 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD17-WDFY3 ANKRD17 chr4 73962833 - WDFY3 chr4 85630500 - Exonic hg19 BRCA TCGA-C8-A26Y 2 In-Frame Intra-chr q13.3 q21.23 Seq+ 2629 ChimerSeq FusionScan TCGA_RNA-Seq BRWD1-GNAI3 BRWD1 chr21 40670357 - GNAI3 chr1 110116358 + Exonic hg19 BRCA TCGA-D8-A1XT 2 In-Frame Inter-chr q22.2 p13.3 2630 ChimerSeq FusionScan TCGA_RNA-Seq DENND5A-SBF2 DENND5A chr11 9215040 - SBF2 chr11 9879943 - Exonic hg19 BRCA TCGA-D8-A1XT 2 In-Frame Intra-chr p15.4 p15.4 Seq+ 2631 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 BRCA TCGA-D8-A1XT 2 Out-of-Frame Intra-chr q22.2 q22.2 2632 ChimerSeq FusionScan TCGA_RNA-Seq TSPAN15-VPS26A TSPAN15 chr10 71211446 + VPS26A chr10 70915567 + Exonic hg19 BRCA TCGA-E2-A15S 2 In-Frame Intra-chr q22.1 q22.1 Seq+ 2633 ChimerSeq FusionScan TCGA_RNA-Seq HPCAL1-CPSF3 HPCAL1 chr2 10537046 + CPSF3 chr2 9607835 + Exonic hg19 BRCA TCGA-A1-A0SO 5 5'UTR-CDS Intra-chr p25.1 p25.1 Seq+ 2634 ChimerSeq FusionScan TCGA_RNA-Seq UBE2Q1-HPS1 UBE2Q1 chr1 154530702 - HPS1 chr10 100187021 - Exonic hg19 BRCA TCGA-A1-A0SO 5 Out-of-Frame Inter-chr q21.3 q24.2 Seq+ 2635 ChimerSeq FusionScan TCGA_RNA-Seq XRCC5-FLJ33534 XRCC5 chr2 217026771 + FLJ33534 chr2 11264911 - Exonic hg19 BRCA TCGA-A1-A0SO 4 CDS-3'UTR Intra-chr q35 Tumor suppressor gene 2636 ChimerSeq FusionScan TCGA_RNA-Seq UBE2G1-ANKFY1 UBE2G1 chr17 4192524 - ANKFY1 chr17 4077351 - Exonic hg19 BRCA TCGA-A1-A0SO 3 In-Frame Intra-chr p13.2 p13.2 Seq+ 2637 ChimerSeq FusionScan TCGA_RNA-Seq DIXDC1-GAB2 DIXDC1 chr11 111808283 + GAB2 chr11 77991947 - Exonic hg19 BRCA TCGA-A1-A0SO 3 In-Frame Intra-chr q23.1 q14.1 Seq+ 2638 ChimerSeq FusionScan TCGA_RNA-Seq PGBD2-KIRREL3 PGBD2 chr1 249200541 + KIRREL3 chr11 126343361 - Exonic hg19 BRCA TCGA-A1-A0SO 3 5'UTR-CDS Inter-chr q44 q24.2 Seq+ 2639 ChimerSeq FusionScan TCGA_RNA-Seq TRIP12-AGFG1 TRIP12 chr2 230786595 - AGFG1 chr2 228401616 + Exonic hg19 BRCA TCGA-A1-A0SO 3 5'UTR-CDS Intra-chr q36.3 q36.3 Seq+ 2640 ChimerSeq FusionScan TCGA_RNA-Seq HDAC2-RSPO3 HDAC2 chr6 114292020 - RSPO3 chr6 127469792 + Exonic hg19 BRCA TCGA-A1-A0SO 2 In-Frame Intra-chr q21 q22.33 Seq+ 2641 ChimerSeq FusionScan TCGA_RNA-Seq IREB2-PSMA4 IREB2 chr15 78758831 + PSMA4 chr15 78836531 + Exonic hg19 BRCA TCGA-A1-A0SO 2 In-Frame Intra-chr q25.1 q25.1 2642 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD46-TMEM222 ANKRD46 chr8 101571938 - TMEM222 chr1 27657210 + Exonic hg19 BRCA TCGA-AN-A04D 12 5'UTR-5'UTR Inter-chr q22.3 p36.11 Seq+ 2643 ChimerSeq FusionScan TCGA_RNA-Seq NPEPL1-EVI5 NPEPL1 chr20 57282256 + EVI5 chr1 93202184 - Exonic hg19 BRCA TCGA-AN-A04D 2 In-Frame Inter-chr q13.32 p22.1 2644 ChimerSeq FusionScan TCGA_RNA-Seq NDUFB9-TDRKH NDUFB9 chr8 125551528 + TDRKH chr1 151755525 - Exonic hg19 BRCA TCGA-AC-A6IX 3 CDS-5'UTR Inter-chr q24.13 q21.3 Seq+ 2645 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF9-CISD2 ARHGEF9 chrX 62974194 - CISD2 chr4 103806372 + Exonic hg19 BRCA TCGA-A2-A0EM 2 5'UTR-CDS Inter-chr q11.2 q24 Seq+ 2646 ChimerSeq FusionScan TCGA_RNA-Seq SEPT9-NARF SEPT9 chr17 75303279 + NARF chr17 80430439 + Exonic hg19 BRCA TCGA-BH-A0DG 5 In-Frame Intra-chr q25.3 Seq+ 2647 ChimerSeq FusionScan TCGA_RNA-Seq LITAF-BCAR4 LITAF chr16 11680741 - BCAR4 chr16 11914154 - Exonic hg19 BRCA TCGA-BH-A0DG 3 5'UTR-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 2648 ChimerSeq FusionScan TCGA_RNA-Seq SEPT9-NARF SEPT9 chr17 75316430 + NARF chr17 80430439 + Exonic hg19 BRCA TCGA-BH-A0DG 3 In-Frame Intra-chr q25.3 Seq+ 2649 ChimerSeq FusionScan TCGA_RNA-Seq SRP68-LPO SRP68 chr17 74036499 - LPO chr17 56327775 + Exonic hg19 BRCA TCGA-BH-A0DG 2 In-Frame Intra-chr q25.1 q22 Seq+ 2650 ChimerSeq FusionScan TCGA_RNA-Seq RPRD1A-RALGAPA2 RPRD1A chr18 33610770 - RALGAPA2 chr20 20661445 - Exonic hg19 BRCA TCGA-AO-A12F 3 Out-of-Frame Inter-chr q12.2 p11.23 Seq+ 2651 ChimerSeq FusionScan TCGA_RNA-Seq ARF1-C1orf198 ARF1 chr1 228270466 + C1orf198 chr1 230991464 - Exonic hg19 BRCA TCGA-AO-A12F 2 5'UTR-5'UTR Intra-chr q42.13 Tumor suppressor gene q42.2 2652 ChimerSeq FusionScan TCGA_RNA-Seq ILF3-SLC44A2 ILF3 chr19 10765163 + SLC44A2 chr19 10738397 + Exonic hg19 BRCA TCGA-AO-A12F 2 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 2653 ChimerSeq FusionScan TCGA_RNA-Seq FUS-ALDH9A1 FUS chr16 31196500 + ALDH9A1 chr1 165634367 - Exonic hg19 BRCA TCGA-AO-A12F 2 In-Frame Inter-chr p11.2 Tumor suppressor gene q24.1 2654 ChimerSeq FusionScan TCGA_RNA-Seq SMARCA4-DNM2 SMARCA4 chr19 11136184 + DNM2 chr19 10930655 + Exonic hg19 BRCA TCGA-AN-A0FJ 3 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 2655 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-CCDC146 PTPN12 chr7 77200503 + CCDC146 chr7 76796974 + Exonic hg19 BRCA TCGA-AN-A0FJ 3 5'UTR-5'UTR Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 2656 ChimerSeq FusionScan TCGA_RNA-Seq EIF4G3-RAP1GAP EIF4G3 chr1 21329205 - RAP1GAP chr1 21945565 - Exonic hg19 BRCA TCGA-AN-A0FJ 3 In-Frame Intra-chr p36.12 p36.12 Tumor suppressor gene Seq+ 2657 ChimerSeq FusionScan TCGA_RNA-Seq SYNPO2-TRIM24 SYNPO2 chr4 119810296 + TRIM24 chr7 138252225 + Exonic hg19 BRCA TCGA-AN-A0FJ 3 In-Frame Inter-chr q26 Tumor suppressor gene q33 Oncogene Tumor suppressor gene Seq+ 2658 ChimerSeq FusionScan TCGA_RNA-Seq MYH9-EIF3D MYH9 chr22 36737414 - EIF3D chr22 36907833 - Exonic hg19 BRCA TCGA-AN-A0FJ 2 Out-of-Frame Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 KB Pub Seq+ 2659 ChimerSeq FusionScan TCGA_RNA-Seq VDAC1-SKP1 VDAC1 chr5 133340337 - SKP1 chr5 133509713 - Exonic hg19 BRCA TCGA-AN-A0FJ 2 3'UTR-5'UTR Intra-chr q31.1 q31.1 Seq+ 2660 ChimerSeq FusionScan TCGA_RNA-Seq GRB2-ACOX1 GRB2 chr17 73389631 - ACOX1 chr17 73949701 - Exonic hg19 BRCA TCGA-AN-A0FJ 2 In-Frame Intra-chr q25.1 q25.1 Seq+ 2661 ChimerSeq FusionScan TCGA_RNA-Seq MYO9B-DDA1 MYO9B chr19 17213367 + DDA1 chr19 17424831 + Exonic hg19 BRCA TCGA-AN-A0FJ 2 In-Frame Intra-chr p13.11 p13.11 Seq+ 2662 ChimerSeq FusionScan TCGA_RNA-Seq PTK2-FLJ43860 PTK2 chr8 141696730 - FLJ43860 chr8 142490548 - Exonic hg19 BRCA TCGA-AN-A0FJ 2 In-Frame Intra-chr q24.3 2663 ChimerSeq FusionScan TCGA_RNA-Seq AKAP8-UBA52 AKAP8 chr19 15490523 - UBA52 chr19 18684102 + Exonic hg19 BRCA TCGA-V7-A7HQ 2 CDS-5'UTR Intra-chr p13.12 Transcription factor p13.11 2664 ChimerSeq FusionScan TCGA_RNA-Seq IKZF3-PNMT IKZF3 chr17 38020372 - PNMT chr17 37825881 + Exonic hg19 BRCA TCGA-3C-AALI 6 In-Frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q12 Seq+ 2665 ChimerSeq FusionScan TCGA_RNA-Seq ACACA-PRKCA ACACA chr17 35468465 - PRKCA chr17 64637472 + Exonic hg19 BRCA TCGA-3C-AALI 4 Out-of-Frame Intra-chr q24.2 Seq+ 2666 ChimerSeq FusionScan TCGA_RNA-Seq UBE2Z-MRPL45 UBE2Z chr17 46990383 + MRPL45 chr17 36462499 + Exonic hg19 BRCA TCGA-3C-AALI 2 In-Frame Intra-chr q21.32 q12 Seq+ 2667 ChimerSeq FusionScan TCGA_RNA-Seq PSMD12-TLK2 PSMD12 chr17 65362527 - TLK2 chr17 60558481 + Exonic hg19 BRCA TCGA-3C-AALI 2 CDS-5'UTR Intra-chr q24.2 q23.2 Other:TLK Seq+ 2668 ChimerSeq FusionScan TCGA_RNA-Seq CWC25-SLC35B1 CWC25 chr17 36981418 - SLC35B1 chr17 47783696 - Exonic hg19 BRCA TCGA-3C-AALI 2 Out-of-Frame Intra-chr q12 q21.33 Seq+ 2669 ChimerSeq FusionScan TCGA_RNA-Seq PAPSS2-LIPJ PAPSS2 chr10 89419765 + LIPJ chr10 90347022 + Exonic hg19 BRCA TCGA-AR-A1AI 3 CDS-5'UTR Intra-chr q23.2 q23.31 Seq+ 2670 ChimerSeq FusionScan TCGA_RNA-Seq PPP3CB-ANXA7 PPP3CB chr10 75214169 - ANXA7 chr10 75147541 - Exonic hg19 BRCA TCGA-AR-A1AI 2 In-Frame Intra-chr q22.2 q22.2 Tumor suppressor gene 2671 ChimerSeq FusionScan TCGA_RNA-Seq ACBD3-DERL1 ACBD3 chr1 226374090 - DERL1 chr8 124037290 - Exonic hg19 BRCA TCGA-A7-A5ZV 2 In-Frame Inter-chr q42.12 q24.13 2672 ChimerSeq FusionScan TCGA_RNA-Seq RNF19A-COX6C RNF19A chr8 101322094 - COX6C chr8 100904280 - Exonic hg19 BRCA TCGA-AN-A0XV 6 5'UTR-5'UTR Intra-chr q22.2 q22.2 Seq+ 2673 ChimerSeq FusionScan TCGA_RNA-Seq PDE7A-NKAIN3 PDE7A chr8 66753605 - NKAIN3 chr8 63492097 + Exonic hg19 BRCA TCGA-AN-A0XV 2 In-Frame Intra-chr q13.1 q12.3 Seq+ 2674 ChimerSeq FusionScan TCGA_RNA-Seq TPD52-COPS5 TPD52 chr8 81083659 - COPS5 chr8 67971680 - Exonic hg19 BRCA TCGA-AN-A0XV 2 Out-of-Frame Intra-chr q21.13 q13.1 Seq+ 2675 ChimerSeq FusionScan TCGA_RNA-Seq ACLY-DNAJC7 ACLY chr17 40057948 - DNAJC7 chr17 40129341 - Exonic hg19 BRCA TCGA-LL-A6FR 6 In-Frame Intra-chr q21.2 q21.2 Seq+ 2676 ChimerSeq FusionScan TCGA_RNA-Seq IPO11-TNFAIP8 IPO11 chr5 61770291 + TNFAIP8 chr5 118728510 + Exonic hg19 BRCA TCGA-A8-A08L 3 In-Frame Intra-chr q12.1 q23.1 Seq+ 2677 ChimerSeq FusionScan TCGA_RNA-Seq CTBP2-ADAM12 CTBP2 chr10 126799558 - ADAM12 chr10 128019078 - Exonic hg19 BRCA TCGA-A8-A08L 3 5'UTR-CDS Intra-chr q26.13 q26.2 Seq+ 2678 ChimerSeq FusionScan TCGA_RNA-Seq ARF1-C1orf198 ARF1 chr1 228270466 + C1orf198 chr1 230991464 - Exonic hg19 BRCA TCGA-AO-A12F 2 5'UTR-5'UTR Intra-chr q42.13 Tumor suppressor gene q42.2 2679 ChimerSeq FusionScan TCGA_RNA-Seq ILF3-SLC44A2 ILF3 chr19 10765163 + SLC44A2 chr19 10738397 + Exonic hg19 BRCA TCGA-AO-A12F 2 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 2680 ChimerSeq FusionScan TCGA_RNA-Seq UHRF1-ACTA2 UHRF1 chr19 4911050 + ACTA2 chr10 90707143 - Exonic hg19 BRCA TCGA-E2-A106 4 In-Frame Inter-chr p13.3 q23.31 Seq+ 2681 ChimerSeq FusionScan TCGA_RNA-Seq KCNMA1-RFX2 KCNMA1 chr10 79397022 - RFX2 chr19 6047515 - Exonic hg19 BRCA TCGA-E2-A106 2 CDS-5'UTR Inter-chr q22.3 p13.3 Transcription factor Seq+ 2682 ChimerSeq FusionScan TCGA_RNA-Seq C10orf57-CREB3L3 C10orf57 chr10 81841960 + CREB3L3 chr19 4170136 + Exonic hg19 BRCA TCGA-E2-A106 2 In-Frame Inter-chr p13.3 Transcription factor Seq+ 2683 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KA1-RASGRP3 RPS6KA1 chr1 26863460 + RASGRP3 chr2 33759389 + Exonic hg19 BRCA TCGA-E2-A106 2 In-Frame Inter-chr p22.3 Seq+ 2684 ChimerSeq FusionScan TCGA_RNA-Seq USP34-WDR92 USP34 chr2 61697784 - WDR92 chr2 68374699 - Exonic hg19 BRCA TCGA-E2-A1II 2 Out-of-Frame Intra-chr p15 p14 Seq+ 2685 ChimerSeq FusionScan TCGA_RNA-Seq TCF12-TEX9 TCF12 chr15 57213296 + TEX9 chr15 56665638 + Exonic hg19 BRCA TCGA-A2-A04T 2 Out-of-Frame Intra-chr q21.3 Oncogene Transcription factor q21.3 Seq+ 2686 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-PRKAG2 MLL3 chr7 151960100 - PRKAG2 chr7 151273538 - Exonic hg19 BRCA TCGA-A8-A06X 2 In-Frame Intra-chr Tumor suppressor gene q36.1 Seq+ 2687 ChimerSeq FusionScan TCGA_RNA-Seq IMMP1L-NAB1 IMMP1L chr11 31531065 - NAB1 chr2 191520702 + Exonic hg19 BRCA TCGA-A8-A06X 2 5'UTR-5'UTR Inter-chr p13 q32.2 2688 ChimerSeq FusionScan TCGA_RNA-Seq ATXN7L1-SHFM1 ATXN7L1 chr7 105516257 - SHFM1 chr7 96324203 - Exonic hg19 BRCA TCGA-E9-A5FL 2 In-Frame Intra-chr q22.3 2689 ChimerSeq FusionScan TCGA_RNA-Seq MKL2-SHISA9 MKL2 chr16 14173211 + SHISA9 chr16 13297250 + Exonic hg19 BRCA TCGA-E9-A5FL 2 5'UTR-CDS Intra-chr p13.12 p13.12 Seq+ 2690 ChimerSeq FusionScan TCGA_RNA-Seq STK3-POLR2K STK3 chr8 99837742 - POLR2K chr8 101163574 + Exonic hg19 BRCA TCGA-E9-A5FL 2 CDS-5'UTR Intra-chr q22.2 q22.2 Seq+ 2691 ChimerSeq FusionScan TCGA_RNA-Seq IQCB1-CACNG4 IQCB1 chr3 121553237 - CACNG4 chr17 65014304 + Exonic hg19 BRCA TCGA-AO-A03L 3 5'UTR-CDS Inter-chr q13.33 q24.2 Seq+ 2692 ChimerSeq FusionScan TCGA_RNA-Seq EAF2-RGS9 EAF2 chr3 121554238 + RGS9 chr17 63221119 + Exonic hg19 BRCA TCGA-AO-A03L 3 Out-of-Frame Inter-chr q13.33 Tumor suppressor gene q24.1 Seq+ 2693 ChimerSeq FusionScan TCGA_RNA-Seq OSBPL2-EDEM2 OSBPL2 chr20 60831277 + EDEM2 chr20 33730281 - Exonic hg19 BRCA TCGA-AO-A03L 2 Out-of-Frame Intra-chr q13.33 q11.22 Seq+ 2694 ChimerSeq FusionScan TCGA_RNA-Seq MRPL48-DTX4 MRPL48 chr11 73536841 + DTX4 chr11 58972148 + Exonic hg19 BRCA TCGA-A8-A093 4 In-Frame Intra-chr q13.4 q12.1 Seq+ 2695 ChimerSeq FusionScan TCGA_RNA-Seq USP22-MYH10 USP22 chr17 20919064 - MYH10 chr17 8508300 - Exonic hg19 BRCA TCGA-A8-A093 4 Out-of-Frame Intra-chr p11.2 p13.1 Seq+ 2696 ChimerSeq FusionScan TCGA_RNA-Seq ZFP91-RAB6A ZFP91 chr11 58352357 + RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-A8-A093 3 Out-of-Frame Intra-chr q12.1 Transcription factor q13.4 Seq+ 2697 ChimerSeq FusionScan TCGA_RNA-Seq SF3B2-SART1 SF3B2 chr11 65820575 + SART1 chr11 65734729 + Exonic hg19 BRCA TCGA-GM-A2DO 2 In-Frame Intra-chr q13.1 q13.1 Seq+ 2698 ChimerSeq FusionScan TCGA_RNA-Seq ACO1-TYRP1 ACO1 chr9 32384733 + TYRP1 chr9 12693911 + Exonic hg19 BRCA TCGA-OL-A5RY 3 5'UTR-5'UTR Intra-chr p21.1 p23 Seq+ 2699 ChimerSeq FusionScan TCGA_RNA-Seq SMARCC1-MAP4 SMARCC1 chr3 47755904 - MAP4 chr3 47912776 - Exonic hg19 BRCA TCGA-OL-A5D7 4 Out-of-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 2700 ChimerSeq FusionScan TCGA_RNA-Seq STK11-KDM4B STK11 chr19 1207202 + KDM4B chr19 5032876 + Exonic hg19 BRCA TCGA-OL-A5D7 2 CDS-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 2701 ChimerSeq FusionScan TCGA_RNA-Seq FRYL-DTD1 FRYL chr4 48621290 - DTD1 chr20 18724743 + Exonic hg19 BRCA TCGA-OL-A5D7 2 In-Frame Inter-chr p11 p11.23 Seq+ 2702 ChimerSeq FusionScan TCGA_RNA-Seq SOGA1-SAMHD1 SOGA1 chr20 35457456 - SAMHD1 chr20 35547922 - Exonic hg19 BRCA TCGA-OL-A5D7 2 In-Frame Intra-chr q11.23 q11.23 Seq+ 2703 ChimerSeq FusionScan TCGA_RNA-Seq MTMR1-HS1BP3 MTMR1 chrX 149924337 + HS1BP3 chr2 20840940 - Exonic hg19 BRCA TCGA-OL-A5D7 2 In-Frame Inter-chr q28 p24.1 Seq+ 2704 ChimerSeq FusionScan TCGA_RNA-Seq MAN1A2-CD101 MAN1A2 chr1 118009049 + CD101 chr1 117576481 + Exonic hg19 BRCA TCGA-OL-A5D7 2 In-Frame Intra-chr p12 p13.1 Seq+ 2705 ChimerSeq FusionScan TCGA_RNA-Seq UGT3A1-NAT1 UGT3A1 chr5 35997340 - NAT1 chr8 18076919 + Exonic hg19 BRCA TCGA-A2-A0CS 2 5'UTR-5'UTR Inter-chr p13.2 p22 2706 ChimerSeq FusionScan TCGA_RNA-Seq FOXP1-RGAG4 FOXP1 chr3 71542576 - RGAG4 chrX 71347560 - Exonic hg19 BRCA TCGA-BH-A0BR 4 5'UTR-3'UTR Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 2707 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D9-CORO1C TBC1D9 chr4 141591873 - CORO1C chr12 109072170 - Exonic hg19 BRCA TCGA-BH-A0BR 2 In-Frame Inter-chr q31.21 q24.11 Seq+ 2708 ChimerSeq FusionScan TCGA_RNA-Seq EHMT1-ARRDC1 EHMT1 chr9 140513501 + ARRDC1 chr9 140507347 + Exonic hg19 BRCA TCGA-PL-A8LZ 4 Out-of-Frame Intra-chr q34.3 q34.3 Seq+ 2709 ChimerSeq FusionScan TCGA_RNA-Seq GNAQ-C9orf64 GNAQ chr9 80409378 - C9orf64 chr9 86559904 - Exonic hg19 BRCA TCGA-E2-A159 2 In-Frame Intra-chr q21.2 Oncogene q21.32 Seq+ 2710 ChimerSeq FusionScan TCGA_RNA-Seq SNAP29-IGLL1 SNAP29 chr22 21224821 + IGLL1 chr22 23917269 - Exonic hg19 BRCA TCGA-PE-A5DE 5 In-Frame Intra-chr q11.21 q11.23 Seq+ 2711 ChimerSeq FusionScan TCGA_RNA-Seq TCF7L1-WIF1 TCF7L1 chr2 85361573 + WIF1 chr12 65471634 - Exonic hg19 BRCA TCGA-E2-A1LI 2 In-Frame Inter-chr p11.2 Oncogene Transcription factor q14.3 Tumor suppressor gene Seq+ 2712 ChimerSeq FusionScan TCGA_RNA-Seq DNAL4-DDX17 DNAL4 chr22 39190072 - DDX17 chr22 38897285 - Exonic hg19 BRCA TCGA-E2-A1LI 2 5'UTR-CDS Intra-chr q13.1 q13.1 2713 ChimerSeq FusionScan TCGA_RNA-Seq IST1-FAM133B IST1 chr16 71929492 + FAM133B chr7 92210917 - Exonic hg19 BRCA TCGA-B6-A0WX 2 5'UTR-5'UTR Inter-chr q22.2 q21.2 2714 ChimerSeq FusionScan TCGA_RNA-Seq GET4-HEATR2 GET4 chr7 927156 + HEATR2 chr7 794225 + Exonic hg19 CESC TCGA-JW-A5VJ 3 In-Frame Intra-chr p22.3 Seq+ 2715 ChimerSeq FusionScan TCGA_RNA-Seq PMF1-RAB25 PMF1 chr1 156182967 + RAB25 chr1 156038060 + Exonic hg19 CESC TCGA-DS-A1OC 3 In-Frame Intra-chr q22 q22 Tumor suppressor gene Seq+ 2716 ChimerSeq FusionScan TCGA_RNA-Seq FBXL19-RNF40 FBXL19 chr16 30941905 + RNF40 chr16 30785258 + Exonic hg19 CESC TCGA-DS-A1OC 2 Out-of-Frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 2717 ChimerSeq FusionScan TCGA_RNA-Seq CCDC109B-CAMK2D CCDC109B chr4 110481592 + CAMK2D chr4 114582928 - Exonic hg19 CESC TCGA-IR-A3L7 2 Out-of-Frame Intra-chr q26 2718 ChimerSeq FusionScan TCGA_RNA-Seq TMED10-COX7A2L TMED10 chr14 75643057 - COX7A2L chr2 42580483 - Exonic hg19 CESC TCGA-BI-A20A 2 In-Frame Inter-chr q24.3 p21 2719 ChimerSeq FusionScan TCGA_RNA-Seq DANCR-RFWD2 DANCR chr4 53579126 + RFWD2 chr1 175958615 - Exonic hg19 CESC TCGA-FU-A57G 2 5'UTR-CDS Inter-chr q12 q25.2 Tumor suppressor gene 2720 ChimerSeq FusionScan TCGA_RNA-Seq INADL-APITD1 INADL chr1 62293255 + APITD1 chr1 10493898 + Exonic hg19 CESC TCGA-C5-A8YQ 2 In-Frame Intra-chr Tumor suppressor gene Seq+ 2721 ChimerSeq FusionScan TCGA_RNA-Seq SPOCK2-ASCC1 SPOCK2 chr10 73831901 - ASCC1 chr10 73857208 - Exonic hg19 CESC TCGA-EX-A8YF 2 Out-of-Frame Intra-chr q22.1 q22.1 Seq+ 2722 ChimerSeq FusionScan TCGA_RNA-Seq DANCR-PDCD6IP DANCR chr4 53579126 + PDCD6IP chr3 33905497 + Exonic hg19 CESC TCGA-LP-A4AU 2 5'UTR-CDS Inter-chr q12 p22.3 2723 ChimerSeq FusionScan TCGA_RNA-Seq UPF2-CCDC58 UPF2 chr10 12070743 - CCDC58 chr3 122078766 - Exonic hg19 CESC TCGA-EK-A2R7 2 Out-of-Frame Inter-chr p14 q21.1 2724 ChimerSeq FusionScan TCGA_RNA-Seq U2SURP-RHEB U2SURP chr3 142720515 + RHEB chr7 151188100 - Exonic hg19 CESC TCGA-EK-A2R7 2 Out-of-Frame Inter-chr q23 q36.1 Oncogene 2725 ChimerSeq FusionScan TCGA_RNA-Seq VRK3-TGFB1 VRK3 chr19 50504046 - TGFB1 chr19 41838186 - Exonic hg19 CESC TCGA-IR-A3LH 3 Out-of-Frame Intra-chr q13.33 CK1:VRK q13.2 Tumor suppressor gene Seq+ 2726 ChimerSeq FusionScan TCGA_RNA-Seq ZNF226-AKT2 ZNF226 chr19 44669960 + AKT2 chr19 40748594 - Exonic hg19 CESC TCGA-IR-A3LH 2 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.2 AGC:Akt Oncogene Seq+ 2727 ChimerSeq FusionScan TCGA_RNA-Seq MELK-MS4A12 MELK chr9 36607670 + MS4A12 chr11 60264785 + Exonic hg19 CESC TCGA-MU-A5YI 2 5'UTR-5'UTR Inter-chr p13.2 CAMK:CAMKL q12.2 Seq+ 2728 ChimerSeq FusionScan TCGA_RNA-Seq RALY-SLC24A3 RALY chr20 32581937 + SLC24A3 chr20 19560643 + Exonic hg19 CESC TCGA-UC-A7PF 2 5'UTR-CDS Intra-chr q11.22 p11.23 Seq+ 2729 ChimerSeq FusionScan TCGA_RNA-Seq MED21-LTA4H MED21 chr12 27175554 + LTA4H chr12 96394884 - Exonic hg19 CESC TCGA-Q1-A73S 2 Out-of-Frame Intra-chr p11.23 q23.1 2730 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 CESC TCGA-FU-A3WB 2 Out-of-Frame Intra-chr q22.2 q22.2 2731 ChimerSeq FusionScan TCGA_RNA-Seq ARL8B-ITPR1 ARL8B chr3 5164273 + ITPR1 chr3 4887822 + Exonic hg19 CESC TCGA-EA-A50E 3 In-Frame Intra-chr p26.1 p26.1 Seq+ 2732 ChimerSeq FusionScan TCGA_RNA-Seq RASAL1-RPLP0 RASAL1 chr12 113568689 - RPLP0 chr12 120635265 - Exonic hg19 CESC TCGA-EA-A50E 2 Out-of-Frame Intra-chr q24.13 Tumor suppressor gene q24.23 2733 ChimerSeq FusionScan TCGA_RNA-Seq ABCC1-C16orf45 ABCC1 chr16 16043656 + C16orf45 chr16 15609161 + Exonic hg19 CESC TCGA-VS-A953 2 Out-of-Frame Intra-chr Seq+ 2734 ChimerSeq FusionScan TCGA_RNA-Seq LITAF-BCAR4 LITAF chr16 11680741 - BCAR4 chr16 11914154 - Exonic hg19 CESC TCGA-VS-A953 2 5'UTR-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 2735 ChimerSeq FusionScan TCGA_RNA-Seq EXOC6B-PCCB EXOC6B chr2 73052926 - PCCB chr3 136045644 + Exonic hg19 CESC TCGA-VS-A953 2 Out-of-Frame Inter-chr p13.2 q22.3 Seq+ 2736 ChimerSeq FusionScan TCGA_RNA-Seq SHISA5-IP6K2 SHISA5 chr3 48538569 - IP6K2 chr3 48732854 - Exonic hg19 CESC TCGA-VS-A8EC 4 In-Frame Intra-chr p21.31 p21.31 Seq+ 2737 ChimerSeq FusionScan TCGA_RNA-Seq SHISA5-IP6K2 SHISA5 chr3 48538569 - IP6K2 chr3 48732851 - Exonic hg19 CESC TCGA-VS-A8EC 3 In-Frame Intra-chr p21.31 p21.31 Seq+ 2738 ChimerSeq FusionScan TCGA_RNA-Seq CSNK1E-PLA2G6 CSNK1E chr22 38689260 - PLA2G6 chr22 38512218 - Exonic hg19 CESC TCGA-VS-A8EC 3 3'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 2739 ChimerSeq FusionScan TCGA_RNA-Seq CDC42EP2-MRPL49 CDC42EP2 chr11 65082425 + MRPL49 chr11 64892959 + Exonic hg19 CESC TCGA-VS-A8EC 2 5'UTR-5'UTR Intra-chr q13.1 q13.1 Seq+ 2740 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-NEUROD2 ERBB2 chr17 37856564 + NEUROD2 chr17 37762857 - Exonic hg19 CESC TCGA-DS-A7WF 4 CDS-5'UTR Intra-chr q12 Oncogene q12 Transcription factor Seq+ 2741 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57697534 + VMP1 chr17 57915655 + Exonic hg19 CESC TCGA-MA-AA3W 2 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 2742 ChimerSeq FusionScan TCGA_RNA-Seq DSG2-TTR DSG2 chr18 29078259 + TTR chr18 29172858 + Exonic hg19 CESC TCGA-EK-A3GM 7 In-Frame Intra-chr q12.1 q12.1 Seq+ 2743 ChimerSeq FusionScan TCGA_RNA-Seq ZNF709-MAN2B1 ZNF709 chr19 12595468 - MAN2B1 chr19 12758412 - Exonic hg19 CESC TCGA-IR-A3LI 3 In-Frame Intra-chr p13.2 Transcription factor p13.13 Seq+ 2744 ChimerSeq FusionScan TCGA_RNA-Seq KRT16-JUP KRT16 chr17 39768409 - JUP chr17 39915122 - Exonic hg19 CESC TCGA-DS-A5RQ 10 In-Frame Intra-chr q21.2 q21.2 Tumor suppressor gene Seq+ 2745 ChimerSeq FusionScan TCGA_RNA-Seq C19orf48-NOL9 C19orf48 chr19 51307828 - NOL9 chr1 6586063 - Exonic hg19 CESC TCGA-EK-A2IP 2 5'UTR-CDS Inter-chr q13.33 p36.31 2746 ChimerSeq FusionScan TCGA_RNA-Seq FBXO42-TM9SF4 FBXO42 chr1 16678749 - TM9SF4 chr20 30720815 + Exonic hg19 CESC TCGA-C5-A2M2 2 5'UTR-CDS Inter-chr p36.13 q11.21 2747 ChimerSeq FusionScan TCGA_RNA-Seq NFIX-MAST1 NFIX chr19 13136366 + MAST1 chr19 12975622 + Exonic hg19 CESC TCGA-VS-A952 2 In-Frame Intra-chr p13.13 Transcription factor p13.13 AGC:MAST Seq+ 2748 ChimerSeq FusionScan TCGA_RNA-Seq CAPZA2-S100A8 CAPZA2 chr7 116502704 + S100A8 chr1 153363033 - Exonic hg19 CESC TCGA-EA-A44S 2 CDS-5'UTR Inter-chr q31.2 q21.3 Seq+ 2749 ChimerSeq FusionScan TCGA_RNA-Seq PTPN13-C4orf36 PTPN13 chr4 87656899 + C4orf36 chr4 87797596 - Exonic hg19 CESC TCGA-VS-A8QC 4 CDS-3'UTR Intra-chr q21.3 Tumor suppressor gene q21.3 Seq+ 2750 ChimerSeq FusionScan TCGA_RNA-Seq ABCA5-MBTD1 ABCA5 chr17 67290795 - MBTD1 chr17 49258055 - Exonic hg19 CESC TCGA-VS-A8QC 2 In-Frame Intra-chr q24.3 q21.33 Seq+ 2751 ChimerSeq FusionScan TCGA_RNA-Seq B4GALT1-BAG1 B4GALT1 chr9 33166755 - BAG1 chr9 33262828 - Exonic hg19 CESC TCGA-EA-A1QS 4 In-Frame Intra-chr p21.1 p13.3 Seq+ 2752 ChimerSeq FusionScan TCGA_RNA-Seq NOC2L-C1orf159 NOC2L chr1 894594 - C1orf159 chr1 1022977 - Exonic hg19 CESC TCGA-EA-A1QS 2 Out-of-Frame Intra-chr p36.33 p36.33 Seq+ 2753 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 CESC TCGA-EA-A1QS 2 Out-of-Frame Intra-chr q22.2 q22.2 2754 ChimerSeq FusionScan TCGA_RNA-Seq NARG2-PRKD1 NARG2 chr15 60768261 - PRKD1 chr14 30095762 - Exonic hg19 CESC TCGA-EA-A556 2 Out-of-Frame Inter-chr q12 2755 ChimerSeq FusionScan TCGA_RNA-Seq MICALL2-PSMG3 MICALL2 chr7 1498819 - PSMG3 chr7 1607486 - Exonic hg19 CESC TCGA-C5-A1BM 3 Out-of-Frame Intra-chr p22.3 p22.3 Seq+ 2756 ChimerSeq FusionScan TCGA_RNA-Seq DPY19L4-ALG5 DPY19L4 chr8 95782799 + ALG5 chr13 37526736 - Exonic hg19 CESC TCGA-C5-A1BM 2 In-Frame Inter-chr q22.1 q13.3 2757 ChimerSeq FusionScan TCGA_RNA-Seq LITAF-BCAR4 LITAF chr16 11680741 - BCAR4 chr16 11914154 - Exonic hg19 CESC TCGA-VS-A8QA 3 5'UTR-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 2758 ChimerSeq FusionScan TCGA_RNA-Seq NCOA6-AHCY NCOA6 chr20 33356266 - AHCY chr20 32883391 - Exonic hg19 CESC TCGA-EK-A2IR 2 In-Frame Intra-chr q11.22 q11.22 Seq+ 2759 ChimerSeq FusionScan TCGA_RNA-Seq C3orf26-FILIP1L C3orf26 chr3 99536887 + FILIP1L chr3 99569914 - Exonic hg19 CESC TCGA-EK-A2IR 2 Out-of-Frame Intra-chr q12.1 2760 ChimerSeq FusionScan TCGA_RNA-Seq MAP2K5-IQCH MAP2K5 chr15 67885312 + IQCH chr15 67782340 + Exonic hg19 CESC TCGA-C5-A7X3 3 In-Frame Intra-chr q23 STE:STE7 q23 Seq+ 2761 ChimerSeq FusionScan TCGA_RNA-Seq KREMEN1-HSCB KREMEN1 chr22 29538088 + HSCB chr22 29147228 + Exonic hg19 CESC TCGA-C5-A7X3 2 Out-of-Frame Intra-chr q12.1 q12.1 Seq+ 2762 ChimerSeq FusionScan TCGA_RNA-Seq ZNF227-HNRNPUL1 ZNF227 chr19 44722005 + HNRNPUL1 chr19 41798149 + Exonic hg19 CESC TCGA-JW-A5VI 8 In-Frame Intra-chr q13.31 Transcription factor q13.2 Seq+ 2763 ChimerSeq FusionScan TCGA_RNA-Seq ZNF233-HNRNPUL1 ZNF233 chr19 44768528 + HNRNPUL1 chr19 41798149 + Exonic hg19 CESC TCGA-JW-A5VI 8 In-Frame Intra-chr q13.31 Transcription factor q13.2 Seq+ 2764 ChimerSeq FusionScan TCGA_RNA-Seq C17orf28-SRP68 C17orf28 chr17 72968685 - SRP68 chr17 74057655 - Exonic hg19 CESC TCGA-JW-A5VI 2 In-Frame Intra-chr q25.1 Seq+ 2765 ChimerSeq FusionScan TCGA_RNA-Seq ZNF227-HNRNPUL1 ZNF227 chr19 44717397 + HNRNPUL1 chr19 41798149 + Exonic hg19 CESC TCGA-JW-A5VI 2 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.2 Seq+ 2766 ChimerSeq FusionScan TCGA_RNA-Seq KPNA1-C1orf63 KPNA1 chr3 122233603 - C1orf63 chr1 25573520 - Exonic hg19 CESC TCGA-C5-A2M1 2 5'UTR-5'UTR Inter-chr q21.1 2767 ChimerSeq FusionScan TCGA_RNA-Seq ZNF677-WDR88 ZNF677 chr19 53758086 - WDR88 chr19 33666301 + Exonic hg19 CESC TCGA-C5-A907 3 5'UTR-CDS Intra-chr q13.42 Transcription factor q13.11 Seq+ 2768 ChimerSeq FusionScan TCGA_RNA-Seq VMP1-TUBD1 VMP1 chr17 57895134 + TUBD1 chr17 57944110 - Exonic hg19 CESC TCGA-EK-A3GJ 3 Out-of-Frame Intra-chr q23.1 q23.1 Seq+ 2769 ChimerSeq FusionScan TCGA_RNA-Seq NIPBL-WDR70 NIPBL chr5 36877280 + WDR70 chr5 37697756 + Exonic hg19 CESC TCGA-LP-A4AX 2 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 2770 ChimerSeq FusionScan TCGA_RNA-Seq TTLL10-CTAG1B TTLL10 chr1 1120489 + CTAG1B chrX 153814784 + Exonic hg19 CESC TCGA-Q1-A73P 6 Out-of-Frame Inter-chr p36.33 q28 Seq+ 2771 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103217296 + H2BFM chrX 103295394 + Exonic hg19 CESC TCGA-Q1-A73P 2 5'UTR-CDS Intra-chr q22.2 q22.2 2772 ChimerSeq FusionScan TCGA_RNA-Seq RAB11A-PPP6R3 RAB11A chr15 66161963 + PPP6R3 chr11 68377371 + Exonic hg19 CESC TCGA-ZJ-A8QR 4 Out-of-Frame Inter-chr q22.31 q13.2 Seq+ 2773 ChimerSeq FusionScan TCGA_RNA-Seq TAOK3-SUDS3 TAOK3 chr12 118810452 - SUDS3 chr12 118823918 + Exonic hg19 CESC TCGA-DS-A0VM 4 5'UTR-CDS Intra-chr q24.23 q24.23 Seq+ 2774 ChimerSeq FusionScan TCGA_RNA-Seq VPS29-POLE VPS29 chr12 110939853 - POLE chr12 133226475 - Exonic hg19 CESC TCGA-EX-A3L1 2 In-Frame Intra-chr q24.11 q24.33 2775 ChimerSeq FusionScan TCGA_RNA-Seq PIAS4-CCDC94 PIAS4 chr19 4013347 + CCDC94 chr19 4267620 + Exonic hg19 CESC TCGA-C5-A1M7 3 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 2776 ChimerSeq FusionScan TCGA_RNA-Seq MLLT4-SLC25A3 MLLT4 chr6 168307969 + SLC25A3 chr12 98993732 + Exonic hg19 CESC TCGA-C5-A1M7 2 In-Frame Inter-chr q23.1 2777 ChimerSeq FusionScan TCGA_RNA-Seq SRFBP1-HSD17B4 SRFBP1 chr5 121297763 + HSD17B4 chr5 118860910 + Exonic hg19 CESC TCGA-C5-A1M7 2 In-Frame Intra-chr q23.1 q23.1 2778 ChimerSeq FusionScan TCGA_RNA-Seq SRRD-SNX32 SRRD chr22 26882029 + SNX32 chr11 65616948 + Exonic hg19 CESC TCGA-C5-A2LT 3 Out-of-Frame Inter-chr q12.1 q13.1 Seq+ 2779 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-PPP1R1B ERBB2 chr17 37883800 + PPP1R1B chr17 37791859 + Exonic hg19 CESC TCGA-Q1-A73R 29 In-Frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 2780 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-PPP1R1B ERBB2 chr17 37883256 + PPP1R1B chr17 37791859 + Exonic hg19 CESC TCGA-Q1-A73R 10 Out-of-Frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 2781 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-PGAP3 ERBB2 chr17 37851434 + PGAP3 chr17 37830932 - Exonic hg19 CESC TCGA-Q1-A73R 6 5'UTR-CDS Intra-chr q12 Oncogene q12 Oncogene Seq+ 2782 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-STARD3 ERBB2 chr17 37866734 + STARD3 chr17 37815303 + Exonic hg19 CESC TCGA-Q1-A73R 4 In-Frame Intra-chr q12 Oncogene q12 Seq+ 2783 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 CESC TCGA-Q1-A73R 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 2784 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-PNMT ERBB2 chr17 37851434 + PNMT chr17 37825881 + Exonic hg19 CESC TCGA-Q1-A73R 2 5'UTR-CDS Intra-chr q12 Oncogene q12 2785 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-STARD3 GRB7 chr17 37894645 + STARD3 chr17 37813260 + Exonic hg19 CESC TCGA-Q1-A73R 2 5'UTR-CDS Intra-chr q12 q12 Seq+ 2786 ChimerSeq FusionScan TCGA_RNA-Seq INADL-DYNC2H1 INADL chr1 62483619 + DYNC2H1 chr11 103151076 + Exonic hg19 CESC TCGA-Q1-A6DT 5 Out-of-Frame Inter-chr q22.3 Seq+ 2787 ChimerSeq FusionScan TCGA_RNA-Seq SLC16A10-NME7 SLC16A10 chr6 111498868 + NME7 chr1 169102055 - Exonic hg19 CESC TCGA-Q1-A6DT 2 In-Frame Inter-chr q21 q24.2 Seq+ 2788 ChimerSeq FusionScan TCGA_RNA-Seq CHST8-C19orf24 CHST8 chr19 34180297 + C19orf24 chr19 1278775 + Exonic hg19 CESC TCGA-EK-A2RJ 3 Out-of-Frame Intra-chr q13.11 p13.3 Seq+ 2789 ChimerSeq FusionScan TCGA_RNA-Seq ADAMTSL4-RPL36 ADAMTSL4 chr1 150529811 + RPL36 chr19 5691329 + Exonic hg19 CESC TCGA-EK-A2RJ 2 Out-of-Frame Inter-chr q21.2 p13.3 2790 ChimerSeq FusionScan TCGA_RNA-Seq CCBP2-ZNF662 CCBP2 chr3 42861203 + ZNF662 chr3 42949513 + Exonic hg19 CESC TCGA-EK-A2RJ 2 5'UTR-5'UTR Intra-chr p22.1 Transcription factor 2791 ChimerSeq FusionScan TCGA_RNA-Seq TPX2-COX4I2 TPX2 chr20 30327424 + COX4I2 chr20 30232570 + Exonic hg19 CESC TCGA-LP-A7HU 3 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 2792 ChimerSeq FusionScan TCGA_RNA-Seq BIRC2-TMEM123 BIRC2 chr11 102239279 + TMEM123 chr11 102272937 - Exonic hg19 CESC TCGA-DS-A0VL 4 5'UTR-CDS Intra-chr q22.2 Oncogene q22.2 Seq+ 2793 ChimerSeq FusionScan TCGA_RNA-Seq DYRK1A-APP DYRK1A chr21 38865465 + APP chr21 27284274 - Exonic hg19 CESC TCGA-DS-A0VL 3 Out-of-Frame Intra-chr q22.13 CMGC:DYRK q21.3 Seq+ 2794 ChimerSeq FusionScan TCGA_RNA-Seq RUNDC1-RGS9 RUNDC1 chr17 41142453 + RGS9 chr17 63223392 + Exonic hg19 CESC TCGA-4J-AA1J 4 Out-of-Frame Intra-chr q21.31 q24.1 Seq+ 2795 ChimerSeq FusionScan TCGA_RNA-Seq AARSD1-RGS9 AARSD1 chr17 41131186 - RGS9 chr17 63206605 + Exonic hg19 CESC TCGA-4J-AA1J 2 Out-of-Frame Intra-chr q21.31 q24.1 Seq+ 2796 ChimerSeq FusionScan TCGA_RNA-Seq SUGP2-MEF2B SUGP2 chr19 19135427 - MEF2B chr19 19261573 - Exonic hg19 CESC TCGA-UC-A7PD 3 CDS-5'UTR Intra-chr p13.11 p13.11 Transcription factor Seq+ 2797 ChimerSeq FusionScan TCGA_RNA-Seq AGRN-BAD AGRN chr1 957842 + BAD chr11 64039275 - Exonic hg19 CESC TCGA-UC-A7PD 2 In-Frame Inter-chr p36.33 q13.1 Seq+ 2798 ChimerSeq FusionScan TCGA_RNA-Seq LITAF-BCAR4 LITAF chr16 11680741 - BCAR4 chr16 11914154 - Exonic hg19 CESC TCGA-FU-A3EO 2 5'UTR-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 2799 ChimerSeq FusionScan TCGA_RNA-Seq DSP-RCAN2 DSP chr6 7572301 + RCAN2 chr6 46216633 - Exonic hg19 CESC TCGA-DG-A2KL 5 In-Frame Intra-chr p24.3 Tumor suppressor gene p12.3 Seq+ 2800 ChimerSeq FusionScan TCGA_RNA-Seq C18orf25-DYM C18orf25 chr18 43754296 + DYM chr18 46956817 - Exonic hg19 CESC TCGA-DG-A2KL 2 5'UTR-5'UTR Intra-chr q21.1 q21.1 2801 ChimerSeq FusionScan TCGA_RNA-Seq STX3-RPS27A STX3 chr11 59560987 + RPS27A chr2 55459943 + Exonic hg19 CESC TCGA-EA-A4BA 2 CDS-5'UTR Inter-chr q12.1 p16.1 2802 ChimerSeq FusionScan TCGA_RNA-Seq VEGFA-RSPH9 VEGFA chr6 43746655 + RSPH9 chr6 43638525 + Exonic hg19 CESC TCGA-DS-A3LQ 2 In-Frame Intra-chr p21.1 Tumor suppressor gene p21.1 Seq+ 2803 ChimerSeq FusionScan TCGA_RNA-Seq BOLA2-CORO1A BOLA2 chr16 30204678 - CORO1A chr16 30196529 + Exonic hg19 CESC TCGA-EA-A5ZE 3 CDS-5'UTR Intra-chr p11.2 p11.2 Seq+ 2804 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KA3-MAP7D2 RPS6KA3 chrX 20284681 - MAP7D2 chrX 20082923 - Exonic hg19 CESC TCGA-EA-A411 6 Out-of-Frame Intra-chr p22.12 p22.12 Seq+ 2805 ChimerSeq FusionScan TCGA_RNA-Seq NCKAP1-CPSF3 NCKAP1 chr2 183902719 - CPSF3 chr2 9593041 + Exonic hg19 CESC TCGA-BI-A0VR 2 In-Frame Intra-chr q32.1 p25.1 2806 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1-NMRAL1 WHSC1 chr4 1936989 + NMRAL1 chr16 4511960 - Exonic hg19 CESC TCGA-JX-A3PZ 2 In-Frame Inter-chr Oncogene p13.3 2807 ChimerSeq FusionScan TCGA_RNA-Seq NEK2-METTL13 NEK2 chr1 211840447 - METTL13 chr1 171761156 + Exonic hg19 CESC TCGA-DR-A0ZL 2 In-Frame Intra-chr q32.3 Other:NEK q24.3 2808 ChimerSeq FusionScan TCGA_RNA-Seq BCL3-GRIK4 BCL3 chr19 45252303 + GRIK4 chr11 120686086 + Exonic hg19 CESC TCGA-JX-A5QV 2 In-Frame Inter-chr q13.32 Oncogene q23.3 Seq+ 2809 ChimerSeq FusionScan TCGA_RNA-Seq EHMT1-GFI1B EHMT1 chr9 140513501 + GFI1B chr9 135862045 + Exonic hg19 CESC TCGA-C5-A7XC 5 CDS-5'UTR Intra-chr q34.3 q34.13 Transcription factor Seq+ 2810 ChimerSeq FusionScan TCGA_RNA-Seq THSD1-PCCA THSD1 chr13 52980165 - PCCA chr13 100807232 + Exonic hg19 CESC TCGA-EA-A3QE 2 5'UTR-CDS Intra-chr q14.3 Tumor suppressor gene q32.3 2811 ChimerSeq FusionScan TCGA_RNA-Seq KPNA1-CHRNA9 KPNA1 chr3 122233603 - CHRNA9 chr4 40350898 + Exonic hg19 CESC TCGA-LP-A5U2 3 5'UTR-CDS Inter-chr q21.1 p14 Seq+ 2812 ChimerSeq FusionScan TCGA_RNA-Seq PCP4L1-SDHC PCP4L1 chr1 161228773 + SDHC chr1 161293403 + Exonic hg19 CESC TCGA-DG-A2KM 2 Out-of-Frame Intra-chr q23.3 q23.3 Oncogene 2813 ChimerSeq FusionScan TCGA_RNA-Seq MED13-BAHCC1 MED13 chr17 60142500 - BAHCC1 chr17 79430636 + Exonic hg19 CESC TCGA-VS-A8EJ 3 In-Frame Intra-chr q23.2 q25.3 Seq+ 2814 ChimerSeq FusionScan TCGA_RNA-Seq BACE2-FAM3B BACE2 chr21 42629253 + FAM3B chr21 42710304 + Exonic hg19 CESC TCGA-VS-A8EJ 2 In-Frame Intra-chr q22.2 q22.3 Seq+ 2815 ChimerSeq FusionScan TCGA_RNA-Seq TRIM37-MED13 TRIM37 chr17 57148183 - MED13 chr17 60130066 - Exonic hg19 CESC TCGA-VS-A8EJ 2 Out-of-Frame Intra-chr q22 q23.2 Seq+ 2816 ChimerSeq FusionScan TCGA_RNA-Seq SPOP-STXBP4 SPOP chr17 47755294 - STXBP4 chr17 53150260 + Exonic hg19 CESC TCGA-VS-A8EJ 2 5'UTR-CDS Intra-chr q21.33 Oncogene Tumor suppressor gene q22 Seq+ 2817 ChimerSeq FusionScan TCGA_RNA-Seq PPFIA1-ANO1 PPFIA1 chr11 70118542 + ANO1 chr11 69962563 + Exonic hg19 CESC TCGA-IR-A3LA 8 In-Frame Intra-chr q13.3 q13.3 Seq+ 2818 ChimerSeq FusionScan TCGA_RNA-Seq ANO7-SEPT2 ANO7 chr2 242157796 + SEPT2 chr2 242263630 + Exonic hg19 CESC TCGA-HM-A6W2 2 CDS-5'UTR Intra-chr q37.3 q37.3 Seq+ 2819 ChimerSeq FusionScan TCGA_RNA-Seq FGFR2-KIAA1598 FGFR2 chr10 123243211 - KIAA1598 chr10 118708508 - Exonic hg19 CHOL TCGA-W5-AA2Q 8 In-Frame Intra-chr q26.13 TK:FGFR Oncogene Seq+ 2820 ChimerSeq FusionScan TCGA_RNA-Seq SLFN13-ARHGAP44 SLFN13 chr17 33775740 - ARHGAP44 chr17 12855817 + Exonic hg19 CHOL TCGA-W5-AA31 4 5'UTR-CDS Intra-chr q12 p12 Seq+ 2821 ChimerSeq FusionScan TCGA_RNA-Seq SPNS2-PSMD11 SPNS2 chr17 4428488 + PSMD11 chr17 30804538 + Exonic hg19 CHOL TCGA-W5-AA31 2 In-Frame Intra-chr p13.2 q11.2 Seq+ 2822 ChimerSeq FusionScan TCGA_RNA-Seq MZT2B-SMPD4 MZT2B chr2 130940348 + SMPD4 chr2 130940323 - Exonic hg19 CHOL TCGA-W5-AA30 2 CDS-5'UTR Intra-chr q21.1 q21.1 2823 ChimerSeq FusionScan TCGA_RNA-Seq NFYC-KCNQ4 NFYC chr1 41232375 + KCNQ4 chr1 41282936 + Exonic hg19 CHOL TCGA-ZH-A8Y2 2 Out-of-Frame Intra-chr p34.2 Transcription factor p34.2 2824 ChimerSeq FusionScan TCGA_RNA-Seq SHANK2-SPCS2 SHANK2 chr11 70505932 - SPCS2 chr11 74687901 + Exonic hg19 CHOL TCGA-W5-AA2X 2 Out-of-Frame Intra-chr q13.4 q13.4 Seq+ 2825 ChimerSeq FusionScan TCGA_RNA-Seq SLC29A2-RAB6A SLC29A2 chr11 66133406 - RAB6A chr11 73390765 - Exonic hg19 CHOL TCGA-W5-AA2X 2 In-Frame Intra-chr q13.2 q13.4 Seq+ 2826 ChimerSeq FusionScan TCGA_RNA-Seq FGFR2-BICC1 FGFR2 chr10 123243211 - BICC1 chr10 60566343 + Exonic hg19 CHOL TCGA-W5-AA2W 3 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q21.1 Seq+ 2827 ChimerSeq FusionScan TCGA_RNA-Seq PTPRK-SMNDC1 PTPRK chr6 128561179 - SMNDC1 chr10 112058548 - Exonic hg19 CHOL TCGA-ZH-A8Y1 4 In-Frame Inter-chr Tumor suppressor gene q25.2 Seq+ 2828 ChimerSeq FusionScan TCGA_RNA-Seq MPP5-GPHN MPP5 chr14 67708250 + GPHN chr14 67525365 + Exonic hg19 COAD TCGA-AU-6004 3 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 2829 ChimerSeq FusionScan TCGA_RNA-Seq HN1L-CLCN7 HN1L chr16 1728357 + CLCN7 chr16 1515339 - Exonic hg19 COAD TCGA-AA-3549 2 Out-of-Frame Intra-chr p13.3 2830 ChimerSeq FusionScan TCGA_RNA-Seq YWHAE-PITPNA YWHAE chr17 1303340 - PITPNA chr17 1424939 - Exonic hg19 COAD TCGA-AZ-4614 3 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 2831 ChimerSeq FusionScan TCGA_RNA-Seq YWHAE-INPP5K YWHAE chr17 1303340 - INPP5K chr17 1417273 - Exonic hg19 COAD TCGA-AZ-4614 2 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 2832 ChimerSeq FusionScan TCGA_RNA-Seq OXR1-MRPS28 OXR1 chr8 107696587 + MRPS28 chr8 80831383 - Exonic hg19 COAD TCGA-A6-3807 7 Out-of-Frame Intra-chr q23.1 q21.13 Seq+ 2833 ChimerSeq FusionScan TCGA_RNA-Seq USP7-PRKCB USP7 chr16 9057063 - PRKCB chr16 24043456 + Exonic hg19 COAD TCGA-A6-3807 2 Out-of-Frame Intra-chr p13.2 p12.2 Tumor suppressor gene Seq+ 2834 ChimerSeq FusionScan TCGA_RNA-Seq ORMDL1-RALGDS ORMDL1 chr2 190648994 - RALGDS chr9 135979718 - Exonic hg19 COAD TCGA-DM-A28A 3 5'UTR-CDS Inter-chr q32.2 q34.2 Oncogene Seq+ 2835 ChimerSeq FusionScan TCGA_RNA-Seq MRRF-TTLL11 MRRF chr9 125054119 + TTLL11 chr9 124633027 - Exonic hg19 COAD TCGA-DM-A28A 2 In-Frame Intra-chr q33.2 q33.2 Seq+ 2836 ChimerSeq FusionScan TCGA_RNA-Seq SNHG8-SERINC2 SNHG8 chr4 119200292 + SERINC2 chr1 31905813 + Exonic hg19 COAD TCGA-AA-A017 2 5'UTR-CDS Inter-chr q26 p35.2 2837 ChimerSeq FusionScan TCGA_RNA-Seq NUDC-MICU1 NUDC chr1 27250657 + MICU1 chr10 74183129 - Exonic hg19 COAD TCGA-AA-3858 3 In-Frame Inter-chr p36.11 q22.1 Seq+ 2838 ChimerSeq FusionScan TCGA_RNA-Seq C4orf32-EIF4E C4orf32 chr4 113066889 + EIF4E chr4 99823133 - Exonic hg19 COAD TCGA-AA-3858 2 In-Frame Intra-chr q25 q23 2839 ChimerSeq FusionScan TCGA_RNA-Seq YWHAB-GLO1 YWHAB chr20 43514527 + GLO1 chr6 38654750 - Exonic hg19 COAD TCGA-DM-A1D7 4 5'UTR-CDS Inter-chr q13.12 p21.2 Seq+ 2840 ChimerSeq FusionScan TCGA_RNA-Seq RUNX1-PROS1 RUNX1 chr21 36206706 - PROS1 chr3 93646251 - Exonic hg19 COAD TCGA-A6-6654 3 In-Frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q11.1 Seq+ 2841 ChimerSeq FusionScan TCGA_RNA-Seq TMEM131-NDUFA10 TMEM131 chr2 98525120 - NDUFA10 chr2 240929599 - Exonic hg19 COAD TCGA-AA-3966 2 In-Frame Intra-chr q11.2 2842 ChimerSeq FusionScan TCGA_RNA-Seq MAST2-HP1BP3 MAST2 chr1 46295253 + HP1BP3 chr1 21076375 - Exonic hg19 COAD TCGA-AA-A00N 2 In-Frame Intra-chr p34.1 AGC:MAST p36.12 2843 ChimerSeq FusionScan TCGA_RNA-Seq CWC25-LASP1 CWC25 chr17 36971113 - LASP1 chr17 37074857 + Exonic hg19 COAD TCGA-AA-A02K 2 Out-of-Frame Intra-chr q12 q12 Seq+ 2844 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-RSBN1L PTPN12 chr7 77247882 + RSBN1L chr7 77365726 + Exonic hg19 COAD TCGA-AM-5821 2 Out-of-Frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 2845 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0494-PSMB8 KIAA0494 chr1 47181966 - PSMB8 chr6 32808824 - Exonic hg19 COAD TCGA-AM-5821 2 CDS-5'UTR Inter-chr p21.32 2846 ChimerSeq FusionScan TCGA_RNA-Seq KIF3B-TOX2 KIF3B chr20 30898984 + TOX2 chr20 42602006 + Exonic hg19 COAD TCGA-G4-6625 2 In-Frame Intra-chr q11.21 q13.12 Seq+ 2847 ChimerSeq FusionScan TCGA_RNA-Seq KIF16B-SNX5 KIF16B chr20 16506736 - SNX5 chr20 17923839 - Exonic hg19 COAD TCGA-CM-6164 2 Out-of-Frame Intra-chr p12.1 p11.23 Seq+ 2848 ChimerSeq FusionScan TCGA_RNA-Seq HMGCR-TNPO1 HMGCR chr5 74633125 + TNPO1 chr5 72178293 + Exonic hg19 COAD TCGA-A6-5659 2 5'UTR-CDS Intra-chr q13.3 q13.2 2849 ChimerSeq FusionScan TCGA_RNA-Seq NPTN-ANXA2 NPTN chr15 73925465 - ANXA2 chr15 60678285 - Exonic hg19 COAD TCGA-A6-5659 2 In-Frame Intra-chr q24.1 q22.2 2850 ChimerSeq FusionScan TCGA_RNA-Seq HOMER1-SLC25A46 HOMER1 chr5 78692645 - SLC25A46 chr5 110091164 + Exonic hg19 COAD TCGA-A6-5659 2 Out-of-Frame Intra-chr q14.1 q22.1 2851 ChimerSeq FusionScan TCGA_RNA-Seq KLHDC10-UBE2H KLHDC10 chr7 129710649 + UBE2H chr7 129498781 - Exonic hg19 COAD TCGA-A6-5659 2 In-Frame Intra-chr q32.2 q32.2 2852 ChimerSeq FusionScan TCGA_RNA-Seq R3HDM1-RAB3GAP1 R3HDM1 chr2 136362586 + RAB3GAP1 chr2 135815580 + Exonic hg19 COAD TCGA-A6-5659 2 Out-of-Frame Intra-chr q21.3 q21.3 2853 ChimerSeq FusionScan TCGA_RNA-Seq ARL8B-USP4 ARL8B chr3 5164273 + USP4 chr3 49339975 - Exonic hg19 COAD TCGA-D5-6534 2 In-Frame Intra-chr p26.1 p21.31 Seq+ 2854 ChimerSeq FusionScan TCGA_RNA-Seq GAS2L3-SND1 GAS2L3 chr12 100995531 + SND1 chr7 127334881 + Exonic hg19 COAD TCGA-G4-6626 2 In-Frame Inter-chr q23.1 q32.1 Seq+ 2855 ChimerSeq FusionScan TCGA_RNA-Seq LMTK2-BAIAP2L1 LMTK2 chr7 97736592 + BAIAP2L1 chr7 97949610 - Exonic hg19 COAD TCGA-AY-4071 2 In-Frame Intra-chr q21.3 q22.1 Seq+ 2856 ChimerSeq FusionScan TCGA_RNA-Seq PTRH2-SLK PTRH2 chr17 57784731 - SLK chr10 105779491 + Exonic hg19 COAD TCGA-D5-6927 2 5'UTR-CDS Inter-chr q23.1 q24.33 STE:STE20 2857 ChimerSeq FusionScan TCGA_RNA-Seq SAMD4B-SPTBN4 SAMD4B chr19 39839029 + SPTBN4 chr19 41078243 + Exonic hg19 COAD TCGA-AM-5820 2 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 2858 ChimerSeq FusionScan TCGA_RNA-Seq ARID5A-CNNM4 ARID5A chr2 97202567 + CNNM4 chr2 97462748 + Exonic hg19 COAD TCGA-AM-5820 2 In-Frame Intra-chr q11.2 Transcription factor q11.2 Seq+ 2859 ChimerSeq FusionScan TCGA_RNA-Seq ARID5A-CNNM3 ARID5A chr2 97202567 + CNNM3 chr2 97490794 + Exonic hg19 COAD TCGA-AM-5820 2 In-Frame Intra-chr q11.2 Transcription factor q11.2 2860 ChimerSeq FusionScan TCGA_RNA-Seq CHCHD3-ITPKA CHCHD3 chr7 132659928 - ITPKA chr15 41794599 + Exonic hg19 COAD TCGA-AM-5820 2 In-Frame Inter-chr q33 Transcription factor q15.1 Seq+ 2861 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC7-ABCA6 ZCCHC7 chr9 37126939 + ABCA6 chr17 67136889 - Exonic hg19 COAD TCGA-A6-3810 2 CDS-5'UTR Inter-chr p13.2 q24.3 2862 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC7-CPNE1 ZCCHC7 chr9 37126939 + CPNE1 chr20 34246936 - Exonic hg19 COAD TCGA-A6-3809 2 CDS-5'UTR Inter-chr p13.2 q11.22 2863 ChimerSeq FusionScan TCGA_RNA-Seq TRRAP-ASNS TRRAP chr7 98557113 + ASNS chr7 97493808 - Exonic hg19 COAD TCGA-AY-4070 11 In-Frame Intra-chr q22.1 Atypical:PIKK Oncogene q21.3 Seq+ 2864 ChimerSeq FusionScan TCGA_RNA-Seq NF1-ZPBP2 NF1 chr17 29509683 + ZPBP2 chr17 38026946 + Exonic hg19 COAD TCGA-AY-4070 3 Out-of-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q21.1 Seq+ 2865 ChimerSeq FusionScan TCGA_RNA-Seq KCNQ1-SCT KCNQ1 chr11 2549248 + SCT chr11 626530 - Exonic hg19 COAD TCGA-DM-A0XF 4 Out-of-Frame Intra-chr p15.5 Seq+ 2866 ChimerSeq FusionScan TCGA_RNA-Seq PPP2CA-VDAC1 PPP2CA chr5 133561450 - VDAC1 chr5 133309539 - Exonic hg19 COAD TCGA-DM-A0XF 2 In-Frame Intra-chr q31.1 Tumor suppressor gene q31.1 Seq+ 2867 ChimerSeq FusionScan TCGA_RNA-Seq ARFRP1-ADRM1 ARFRP1 chr20 62337708 - ADRM1 chr20 60881252 + Exonic hg19 COAD TCGA-A6-5656 2 In-Frame Intra-chr q13.33 q13.33 2868 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1L1-ADAM18 WHSC1L1 chr8 38137057 - ADAM18 chr8 39587416 + Exonic hg19 COAD TCGA-D5-6926 3 Out-of-Frame Intra-chr p11.23 Tumor suppressor gene Seq+ 2869 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-GYS1 RCC1 chr1 28832596 + GYS1 chr19 49481414 - Exonic hg19 COAD TCGA-DM-A0X9 2 5'UTR-CDS Inter-chr p35.3 q13.33 2870 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF18-MAPKAP1 ARHGEF18 chr19 7506938 + MAPKAP1 chr9 128230388 - Exonic hg19 COAD TCGA-AD-6901 2 In-Frame Inter-chr p13.2 q33.3 Seq+ 2871 ChimerSeq FusionScan TCGA_RNA-Seq SPATS2L-RPS27A SPATS2L chr2 201194203 + RPS27A chr2 55459943 + Exonic hg19 COAD TCGA-A6-6650 2 5'UTR-5'UTR Intra-chr q33.1 p16.1 2872 ChimerSeq FusionScan TCGA_RNA-Seq NCK1-STAG1 NCK1 chr3 136647069 + STAG1 chr3 136096594 - Exonic hg19 COAD TCGA-A6-6650 2 Out-of-Frame Intra-chr q22.3 q22.3 Seq+ 2873 ChimerSeq FusionScan TCGA_RNA-Seq TRNAU1AP-PTPRU TRNAU1AP chr1 28880249 + PTPRU chr1 29618380 + Exonic hg19 COAD TCGA-D5-6931 2 In-Frame Intra-chr p35.3 p35.3 Seq+ 2874 ChimerSeq FusionScan TCGA_RNA-Seq URB1-FBRSL1 URB1 chr21 33765077 - FBRSL1 chr12 133148873 + Exonic hg19 COAD TCGA-AA-3852 2 Out-of-Frame Inter-chr q22.11 q24.33 2875 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC7-TBCD DNAJC7 chr17 40169357 - TBCD chr17 80869633 + Exonic hg19 COAD TCGA-AA-A01Z 2 In-Frame Intra-chr q21.2 Seq+ 2876 ChimerSeq FusionScan TCGA_RNA-Seq SLC16A1-INADL SLC16A1 chr1 113498656 - INADL chr1 62293093 + Exonic hg19 COAD TCGA-AA-A01Z 2 5'UTR-CDS Intra-chr 2877 ChimerSeq FusionScan TCGA_RNA-Seq CMIP-UBE2G1 CMIP chr16 81479146 + UBE2G1 chr17 4210418 - Exonic hg19 COAD TCGA-QL-A97D 2 Out-of-Frame Inter-chr q23.2 p13.2 Seq+ 2878 ChimerSeq FusionScan TCGA_RNA-Seq ITCH-PIGU ITCH chr20 33077731 + PIGU chr20 33148783 - Exonic hg19 COAD TCGA-G4-6303 3 In-Frame Intra-chr q11.22 q11.22 Seq+ 2879 ChimerSeq FusionScan TCGA_RNA-Seq ASL-SMARCB1 ASL chr7 65541080 + SMARCB1 chr22 24158956 + Exonic hg19 COAD TCGA-CK-4948 2 Out-of-Frame Inter-chr q11.21 q11.23 Oncogene Tumor suppressor gene 2880 ChimerSeq FusionScan TCGA_RNA-Seq PHF20L1-CHMP1A PHF20L1 chr8 133811418 + CHMP1A chr16 89713739 - Exonic hg19 COAD TCGA-AA-3821 2 In-Frame Inter-chr q24.22 q24.3 2881 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1109-FSIP2 KIAA1109 chr4 123210347 + FSIP2 chr2 186692882 + Exonic hg19 COAD TCGA-AA-3693 4 In-Frame Inter-chr q27 q32.1 Seq+ 2882 ChimerSeq FusionScan TCGA_RNA-Seq PPA2-YLPM1 PPA2 chr4 106345352 - YLPM1 chr14 75295915 + Exonic hg19 COAD TCGA-AA-3950 2 In-Frame Inter-chr q24 q24.3 2883 ChimerSeq FusionScan TCGA_RNA-Seq FOXN3-CDKL1 FOXN3 chr14 89878277 - CDKL1 chr14 50796899 - Exonic hg19 COAD TCGA-A6-5667 3 In-Frame Intra-chr q32.11 Transcription factor q22.1 CMGC:CDKL Seq+ 2884 ChimerSeq FusionScan TCGA_RNA-Seq WDR62-TBCB WDR62 chr19 36550932 + TBCB chr19 36616352 + Exonic hg19 COAD TCGA-G4-6299 8 Out-of-Frame Intra-chr q13.12 q13.12 2885 ChimerSeq FusionScan TCGA_RNA-Seq NCEH1-EEF1G NCEH1 chr3 172428636 - EEF1G chr11 62327309 - Exonic hg19 COAD TCGA-G4-6323 2 In-Frame Inter-chr q26.31 q12.3 Seq+ 2886 ChimerSeq FusionScan TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12022903 + NTRK3 chr15 88483984 - Exonic hg19 COAD TCGA-CK-5913 2 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 2887 ChimerSeq FusionScan TCGA_RNA-Seq ACACB-UNG ACACB chr12 109665294 + UNG chr12 109547633 + Exonic hg19 COAD TCGA-AA-A01I 3 3'UTR-CDS Intra-chr q24.11 q24.11 Seq+ 2888 ChimerSeq FusionScan TCGA_RNA-Seq SYNDIG1-MYH9 SYNDIG1 chr20 24565629 + MYH9 chr22 36705441 - Exonic hg19 COAD TCGA-D5-5537 2 In-Frame Inter-chr p11.21 q12.3 Oncogene Tumor suppressor gene 2889 ChimerSeq FusionScan TCGA_RNA-Seq PIAS2-ST8SIA5 PIAS2 chr18 44407921 - ST8SIA5 chr18 44284627 - Exonic hg19 COAD TCGA-D5-6531 2 In-Frame Intra-chr q21.1 q21.1 Seq+ 2890 ChimerSeq FusionScan TCGA_RNA-Seq TPX2-LINC00028 TPX2 chr20 30347982 + LINC00028 chr20 30074834 + Exonic hg19 COAD TCGA-D5-6531 2 CDS-5'UTR Intra-chr q11.21 q11.21 Seq+ 2891 ChimerSeq FusionScan TCGA_RNA-Seq FBXL20-MIEN1 FBXL20 chr17 37499432 - MIEN1 chr17 37886544 - Exonic hg19 COAD TCGA-AA-3869 2 In-Frame Intra-chr q12 q12 Seq+ 2892 ChimerSeq FusionScan TCGA_RNA-Seq ADD3-MXI1 ADD3 chr10 111886261 + MXI1 chr10 112039671 + Exonic hg19 COAD TCGA-AA-3869 2 In-Frame Intra-chr q25.1 q25.2 Tumor suppressor gene Transcription factor Seq+ 2893 ChimerSeq FusionScan TCGA_RNA-Seq NDUFS1-RBM39 NDUFS1 chr2 207018341 - RBM39 chr20 34301018 - Exonic hg19 COAD TCGA-G4-6320 2 In-Frame Inter-chr q11.22 2894 ChimerSeq FusionScan TCGA_RNA-Seq LRRFIP2-MS4A6A LRRFIP2 chr3 37105232 - MS4A6A chr11 59950804 - Exonic hg19 COAD TCGA-AA-3855 2 CDS-5'UTR Inter-chr p22.2 q12.2 2895 ChimerSeq FusionScan TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128505576 - RSPO3 chr6 127469792 + Exonic hg19 COAD TCGA-DM-A1HB 4 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 2896 ChimerSeq FusionScan TCGA_RNA-Seq GNG5-NMI GNG5 chr1 84971693 - NMI chr2 152127389 - Exonic hg19 COAD TCGA-DM-A1HB 2 In-Frame Inter-chr p22.3 q23.3 2897 ChimerSeq FusionScan TCGA_RNA-Seq OBSL1-MRPL2 OBSL1 chr2 220429963 - MRPL2 chr6 43024183 - Exonic hg19 COAD TCGA-AA-A02F 2 In-Frame Inter-chr q35 p21.1 2898 ChimerSeq FusionScan TCGA_RNA-Seq BLCAP-RALY BLCAP chr20 36156194 - RALY chr20 32619327 + Exonic hg19 COAD TCGA-AD-6888 2 5'UTR-5'UTR Intra-chr q11.23 Tumor suppressor gene q11.22 2899 ChimerSeq FusionScan TCGA_RNA-Seq SLC29A1-ZFAND3 SLC29A1 chr6 44195079 + ZFAND3 chr6 37897734 + Exonic hg19 COAD TCGA-CM-5341 3 In-Frame Intra-chr p21.1 p21.2 2900 ChimerSeq FusionScan TCGA_RNA-Seq NCALD-NSMCE2 NCALD chr8 102803089 - NSMCE2 chr8 126369460 + Exonic hg19 COAD TCGA-CM-4748 3 5'UTR-CDS Intra-chr q22.3 q24.13 Seq+ 2901 ChimerSeq FusionScan TCGA_RNA-Seq NCALD-NSMCE2 NCALD chr8 102928036 - NSMCE2 chr8 126369460 + Exonic hg19 COAD TCGA-CM-4748 2 5'UTR-CDS Intra-chr q22.3 q24.13 Seq+ 2902 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0146-LAPTM4B KIAA0146 chr8 48511758 + LAPTM4B chr8 98863624 + Exonic hg19 COAD TCGA-AA-3662 5 Out-of-Frame Intra-chr q22.1 Seq+ 2903 ChimerSeq FusionScan TCGA_RNA-Seq RPH3AL-ALOX15B RPH3AL chr17 169210 - ALOX15B chr17 7942703 + Exonic hg19 COAD TCGA-AA-3662 2 In-Frame Intra-chr p13.1 Tumor suppressor gene Seq+ 2904 ChimerSeq FusionScan TCGA_RNA-Seq TANC1-MARCH7 TANC1 chr2 159857701 + 2019_ 3_ 7_ chr2 160585519 + Exonic hg19 COAD TCGA-AD-6895 3 5'UTR-5'UTR Intra-chr q24.2 q24.2 Seq+ 2905 ChimerSeq FusionScan TCGA_RNA-Seq RAI1-PPP1R12C RAI1 chr17 17585107 + PPP1R12C chr19 55607703 - Exonic hg19 COAD TCGA-AA-3980 2 5'UTR-CDS Inter-chr p11.2 q13.42 2906 ChimerSeq FusionScan TCGA_RNA-Seq SNHG7-LCN6 SNHG7 chr9 139621497 - LCN6 chr9 139642015 - Exonic hg19 COAD TCGA-AA-3864 12 3'UTR-CDS Intra-chr q34.3 q34.3 2907 ChimerSeq FusionScan TCGA_RNA-Seq KBTBD2-CYFIP1 KBTBD2 chr7 32914603 - CYFIP1 chr15 22935859 + Exonic hg19 COAD TCGA-A6-2676 2 In-Frame Inter-chr p14.3 q11.2 2908 ChimerSeq FusionScan TCGA_RNA-Seq VPS53-PCNXL2 VPS53 chr17 602570 - PCNXL2 chr1 233231609 - Exonic hg19 COAD TCGA-AA-3952 5 Out-of-Frame Inter-chr Tumor suppressor gene Seq+ 2909 ChimerSeq FusionScan TCGA_RNA-Seq PROM1-FKBP5 PROM1 chr4 16077309 - FKBP5 chr6 35610620 - Exonic hg19 COAD TCGA-AA-3947 2 CDS-5'UTR Inter-chr p15.32 p21.31 2910 ChimerSeq FusionScan TCGA_RNA-Seq EPB41L2-STAT3 EPB41L2 chr6 131384294 - STAT3 chr17 40474512 - Exonic hg19 COAD TCGA-G4-6317 3 5'UTR-CDS Inter-chr q23.2 q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 2911 ChimerSeq FusionScan TCGA_RNA-Seq DIDO1-TCFL5 DIDO1 chr20 61569147 - TCFL5 chr20 61491660 - Exonic hg19 COAD TCGA-AA-3543 2 5'UTR-CDS Intra-chr q13.33 Tumor suppressor gene q13.33 Transcription factor 2912 ChimerSeq FusionScan TCGA_RNA-Seq IGF2BP2-MSL2 IGF2BP2 chr3 185540940 - MSL2 chr3 135871580 - Exonic hg19 COAD TCGA-CK-5915 2 Out-of-Frame Intra-chr q27.2 q22.3 2913 ChimerSeq FusionScan TCGA_RNA-Seq MVP-TMEM219 MVP chr16 29831831 + TMEM219 chr16 29979345 + Exonic hg19 COAD TCGA-CK-5915 2 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 2914 ChimerSeq FusionScan TCGA_RNA-Seq EPN1-CCDC106 EPN1 chr19 56190221 + CCDC106 chr19 56160367 + Exonic hg19 COAD TCGA-AA-3850 7 CDS-5'UTR Intra-chr q13.42 q13.42 Seq+ 2915 ChimerSeq FusionScan TCGA_RNA-Seq MIER2-RPL26 MIER2 chr19 325634 - RPL26 chr17 8285633 - Exonic hg19 COAD TCGA-AA-3850 6 CDS-5'UTR Inter-chr p13.3 p13.1 Seq+ 2916 ChimerSeq FusionScan TCGA_RNA-Seq EPS15L1-CHERP EPS15L1 chr19 16582723 - CHERP chr19 16652854 - Exonic hg19 COAD TCGA-AA-3850 6 Out-of-Frame Intra-chr p13.11 p13.11 Seq+ 2917 ChimerSeq FusionScan TCGA_RNA-Seq DAZAP1-NDUFS7 DAZAP1 chr19 1417539 + NDUFS7 chr19 1387809 + Exonic hg19 COAD TCGA-AA-3850 4 In-Frame Intra-chr p13.3 p13.3 Seq+ 2918 ChimerSeq FusionScan TCGA_RNA-Seq ESR1-MTHFD1L ESR1 chr6 152129499 + MTHFD1L chr6 151330954 + Exonic hg19 COAD TCGA-AA-3850 4 Out-of-Frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 Seq+ 2919 ChimerSeq FusionScan TCGA_RNA-Seq ST3GAL2-COG4 ST3GAL2 chr16 70432094 - COG4 chr16 70524295 - Exonic hg19 COAD TCGA-AA-3850 4 In-Frame Intra-chr q22.1 q22.1 Seq+ 2920 ChimerSeq FusionScan TCGA_RNA-Seq CELSR2-KIAA1324 CELSR2 chr1 109808828 + KIAA1324 chr1 109714487 + Exonic hg19 COAD TCGA-AA-3850 4 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 2921 ChimerSeq FusionScan TCGA_RNA-Seq IP6K2-PRKAR2A IP6K2 chr3 48754589 - PRKAR2A chr3 48845117 - Exonic hg19 COAD TCGA-AA-3850 3 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 2922 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT6 NDUFA11 chr19 5896463 - FUT6 chr19 5832590 - Exonic hg19 COAD TCGA-AA-3850 2 CDS-5'UTR Intra-chr p13.3 p13.3 2923 ChimerSeq FusionScan TCGA_RNA-Seq EIF3J-C21orf59 EIF3J chr15 44829625 + C21orf59 chr21 33974283 - Exonic hg19 COAD TCGA-AA-3850 2 In-Frame Inter-chr q21.1 q22.11 2924 ChimerSeq FusionScan TCGA_RNA-Seq PXMP2-DDB2 PXMP2 chr12 133277955 + DDB2 chr11 47259387 + Exonic hg19 COAD TCGA-AA-3850 2 In-Frame Inter-chr q24.33 p11.2 Oncogene Tumor suppressor gene 2925 ChimerSeq FusionScan TCGA_RNA-Seq CBX1-SKAP1 CBX1 chr17 46178629 - SKAP1 chr17 46214699 - Exonic hg19 COAD TCGA-AA-3850 2 5'UTR-CDS Intra-chr q21.32 q21.32 Seq+ 2926 ChimerSeq FusionScan TCGA_RNA-Seq CBX1-SKAP1 CBX1 chr17 46154226 - SKAP1 chr17 46214699 - Exonic hg19 COAD TCGA-AA-3850 2 Out-of-Frame Intra-chr q21.32 q21.32 Seq+ 2927 ChimerSeq FusionScan TCGA_RNA-Seq CBFB-CES4A CBFB chr16 67070658 + CES4A chr16 67029530 + Exonic hg19 COAD TCGA-AA-3850 2 Out-of-Frame Intra-chr q22.1 q22.1 Seq+ 2928 ChimerSeq FusionScan TCGA_RNA-Seq ENAH-TMEM63A ENAH chr1 225754950 - TMEM63A chr1 226034914 - Exonic hg19 COAD TCGA-AA-3850 2 In-Frame Intra-chr q42.12 q42.12 2929 ChimerSeq FusionScan TCGA_RNA-Seq LRIG1-SLC25A26 LRIG1 chr3 66436404 - SLC25A26 chr3 66419901 + Exonic hg19 COAD TCGA-AA-3850 2 In-Frame Intra-chr Tumor suppressor gene Seq+ 2930 ChimerSeq FusionScan TCGA_RNA-Seq GRSF1-ELFN2 GRSF1 chr4 71698023 - ELFN2 chr22 37772036 - Exonic hg19 COAD TCGA-RU-A8FL 2 CDS-5'UTR Inter-chr q13.3 q13.1 Seq+ 2931 ChimerSeq FusionScan TCGA_RNA-Seq ARFGEF2-SULF2 ARFGEF2 chr20 47538547 + SULF2 chr20 46365686 - Exonic hg19 COAD TCGA-AA-3695 2 In-Frame Intra-chr q13.13 q13.12 KB Pub Seq+ 2932 ChimerSeq FusionScan TCGA_RNA-Seq TNPO3-AHCYL2 TNPO3 chr7 128694704 - AHCYL2 chr7 129019481 + Exonic hg19 COAD TCGA-CM-4747 2 In-Frame Intra-chr q32.1 q32.1 Seq+ 2933 ChimerSeq FusionScan TCGA_RNA-Seq SYMPK-LYZ SYMPK chr19 46366315 - LYZ chr12 69743887 + Exonic hg19 COAD TCGA-AZ-4615 2 5'UTR-CDS Inter-chr q13.32 q15 2934 ChimerSeq FusionScan TCGA_RNA-Seq LRBA-SH3D19 LRBA chr4 151682934 - SH3D19 chr4 152070713 - Exonic hg19 COAD TCGA-CM-6170 2 Out-of-Frame Intra-chr q31.3 q31.3 KB Seq+ 2935 ChimerSeq FusionScan TCGA_RNA-Seq GALNT7-SNX25 GALNT7 chr4 174090112 + SNX25 chr4 186241886 + Exonic hg19 COAD TCGA-AA-3544 2 In-Frame Intra-chr q34.1 q35.1 Seq+ 2936 ChimerSeq FusionScan TCGA_RNA-Seq GSK3B-NCK1 GSK3B chr3 119812193 - NCK1 chr3 136646825 + Exonic hg19 COAD TCGA-AA-3819 2 CDS-5'UTR Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q22.3 2937 ChimerSeq FusionScan TCGA_RNA-Seq LUC7L-NFE2L2 LUC7L chr16 279277 - NFE2L2 chr2 178098999 - Exonic hg19 COAD TCGA-A6-2674 2 Out-of-Frame Inter-chr p13.3 q31.2 Oncogene Transcription factor 2938 ChimerSeq FusionScan TCGA_RNA-Seq CHD7-TCF7L2 CHD7 chr8 61655656 + TCF7L2 chr10 114900942 + Exonic hg19 COAD TCGA-F4-6807 4 In-Frame Inter-chr q12.2 q25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 2939 ChimerSeq FusionScan TCGA_RNA-Seq RNF43-HEATR6 RNF43 chr17 56494377 - HEATR6 chr17 58125749 - Exonic hg19 COAD TCGA-CM-6167 2 5'UTR-CDS Intra-chr q22 Oncogene q23.1 2940 ChimerSeq FusionScan TCGA_RNA-Seq MAPK9-STK4 MAPK9 chr5 179718847 - STK4 chr20 43653613 + Exonic hg19 COAD TCGA-A6-2674 2 5'UTR-CDS Inter-chr q35.3 Tumor suppressor gene q13.12 2941 ChimerSeq FusionScan TCGA_RNA-Seq BANP-PPA2 BANP chr16 88071617 + PPA2 chr4 106377902 - Exonic hg19 COAD TCGA-A6-2674 2 Out-of-Frame Inter-chr q24.2 Tumor suppressor gene q24 2942 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC5-PRPF6 DNAJC5 chr20 62562375 + PRPF6 chr20 62614399 + Exonic hg19 COAD TCGA-A6-2674 2 Out-of-Frame Intra-chr q13.33 q13.33 2943 ChimerSeq FusionScan TCGA_RNA-Seq PRSS3-ADAM23 PRSS3 chr9 33750725 + ADAM23 chr2 207345955 + Exonic hg19 COAD TCGA-AA-3556 2 Out-of-Frame Inter-chr p13.3 q33.3 2944 ChimerSeq FusionScan TCGA_RNA-Seq ANKFY1-UBE2G1 ANKFY1 chr17 4167226 - UBE2G1 chr17 4210418 - Exonic hg19 COAD TCGA-AU-3779 2 In-Frame Intra-chr p13.2 p13.2 Seq+ 2945 ChimerSeq FusionScan TCGA_RNA-Seq RPL18-RPS2 RPL18 chr19 49122397 - RPS2 chr16 2013257 - Exonic hg19 COAD TCGA-DM-A1D8 2 In-Frame Inter-chr q13.33 p13.3 2946 ChimerSeq FusionScan TCGA_RNA-Seq CSNK1G1-TPM1 CSNK1G1 chr15 64648186 - TPM1 chr15 63349183 + Exonic hg19 COAD TCGA-DM-A1D8 2 5'UTR-CDS Intra-chr q22.31 q22.2 2947 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-CEP95 CLTC chr17 57739004 + CEP95 chr17 62532719 + Exonic hg19 COAD TCGA-CA-5254 5 In-Frame Intra-chr q23.1 q23.3 Seq+ 2948 ChimerSeq FusionScan TCGA_RNA-Seq MXI1-C10orf57 MXI1 chr10 111967840 + C10orf57 chr10 81841596 + Exonic hg19 COAD TCGA-CA-5254 2 Out-of-Frame Intra-chr q25.2 Tumor suppressor gene Transcription factor Seq+ 2949 ChimerSeq FusionScan TCGA_RNA-Seq TMEM123-MMP20 TMEM123 chr11 102319542 - MMP20 chr11 102464326 - Exonic hg19 COAD TCGA-CA-5254 2 In-Frame Intra-chr q22.2 q22.2 Seq+ 2950 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHA1-HTRA1 PLEKHA1 chr10 124177484 + HTRA1 chr10 124248417 + Exonic hg19 COAD TCGA-CA-5254 2 Out-of-Frame Intra-chr q26.13 q26.13 Tumor suppressor gene 2951 ChimerSeq FusionScan TCGA_RNA-Seq MSL1-AFMID MSL1 chr17 38282659 + AFMID chr17 76198579 + Exonic hg19 COAD TCGA-AA-3679 2 Out-of-Frame Intra-chr q21.1 q25.3 Seq+ 2952 ChimerSeq FusionScan TCGA_RNA-Seq THRAP3-GNAI3 THRAP3 chr1 36690106 + GNAI3 chr1 110116358 + Exonic hg19 COAD TCGA-A6-6138 2 5'UTR-CDS Intra-chr p34.3 p13.3 2953 ChimerSeq FusionScan TCGA_RNA-Seq THRAP3-PSMB2 THRAP3 chr1 36690106 + PSMB2 chr1 36075009 - Exonic hg19 COAD TCGA-AA-A01T 2 5'UTR-5'UTR Intra-chr p34.3 p34.3 2954 ChimerSeq FusionScan TCGA_RNA-Seq ZNF460-C19orf18 ZNF460 chr19 57792204 + C19orf18 chr19 58470085 - Exonic hg19 COAD TCGA-QG-A5YX 4 Out-of-Frame Intra-chr q13.43 Transcription factor q13.43 Seq+ 2955 ChimerSeq FusionScan TCGA_RNA-Seq ACTR3B-JMJD1C ACTR3B chr7 152522207 + JMJD1C chr10 65140242 - Exonic hg19 COAD TCGA-A6-5656 2 In-Frame Inter-chr q36.1 q21.3 2956 ChimerSeq FusionScan TCGA_RNA-Seq ZFYVE28-RBM33 ZFYVE28 chr4 2355659 - RBM33 chr7 155457868 + Exonic hg19 COAD TCGA-A6-5656 2 Out-of-Frame Inter-chr p16.3 q36.3 2957 ChimerSeq FusionScan TCGA_RNA-Seq RCN2-SCAPER RCN2 chr15 77228063 + SCAPER chr15 77064295 - Exonic hg19 COAD TCGA-A6-5656 2 In-Frame Intra-chr q24.3 q24.3 Seq+ 2958 ChimerSeq FusionScan TCGA_RNA-Seq CD9-SIM2 CD9 chr12 6334700 + SIM2 chr21 38084832 + Exonic hg19 COAD TCGA-A6-5656 2 Out-of-Frame Inter-chr p13.31 q22.13 Transcription factor 2959 ChimerSeq FusionScan TCGA_RNA-Seq SEPT7-ICA1 SEPT7 chr7 35913385 + ICA1 chr7 8198282 - Exonic hg19 COAD TCGA-A6-5656 2 In-Frame Intra-chr p14.2 p21.3 Seq+ 2960 ChimerSeq FusionScan TCGA_RNA-Seq NEK3-ATP7B NEK3 chr13 52733677 - ATP7B chr13 52524535 - Exonic hg19 COAD TCGA-A6-5656 2 5'UTR-CDS Intra-chr q14.3 Other:NEK q14.3 2961 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0182-CYHR1 KIAA0182 chr16 85682357 + CYHR1 chr8 145676153 - Exonic hg19 COAD TCGA-A6-5656 2 Out-of-Frame Inter-chr q24.3 2962 ChimerSeq FusionScan TCGA_RNA-Seq ZNF121-ADCY5 ZNF121 chr19 9695136 - ADCY5 chr3 123022066 - Exonic hg19 COAD TCGA-AA-A02E 2 5'UTR-CDS Inter-chr p13.2 Transcription factor q21.1 Seq+ 2963 ChimerSeq FusionScan TCGA_RNA-Seq POU2F1-NOC4L POU2F1 chr1 167190195 + NOC4L chr12 132635525 + Exonic hg19 COAD TCGA-AA-A02E 2 In-Frame Inter-chr q24.2 Transcription factor q24.33 2964 ChimerSeq FusionScan TCGA_RNA-Seq CD2AP-MDFI CD2AP chr6 47445984 + MDFI chr6 41621056 + Exonic hg19 COAD TCGA-AA-A00O 10 In-Frame Intra-chr p12.3 p21.1 Seq+ 2965 ChimerSeq FusionScan TCGA_RNA-Seq C16orf52-DCUN1D3 C16orf52 chr16 22019728 + DCUN1D3 chr16 20873965 - Exonic hg19 COAD TCGA-AA-A01K 3 CDS-5'UTR Intra-chr p12.3 Tumor suppressor gene 2966 ChimerSeq FusionScan TCGA_RNA-Seq JAG1-INPP5A JAG1 chr20 10653348 - INPP5A chr10 134421418 + Exonic hg19 COAD TCGA-A6-2685 2 In-Frame Inter-chr p12.2 q26.3 2967 ChimerSeq FusionScan TCGA_RNA-Seq PLCL1-ACSL3 PLCL1 chr2 198670063 + ACSL3 chr2 223765391 + Exonic hg19 COAD TCGA-A6-4105 2 CDS-5'UTR Intra-chr q33.1 q36.1 2968 ChimerSeq FusionScan TCGA_RNA-Seq GNA13-ASPSCR1 GNA13 chr17 63049619 - ASPSCR1 chr17 79966912 + Exonic hg19 COAD TCGA-D5-6929 3 In-Frame Intra-chr q24.1 q25.3 Seq+ 2969 ChimerSeq FusionScan TCGA_RNA-Seq PRKAR1A-PITPNC1 PRKAR1A chr17 66511717 + PITPNC1 chr17 65528917 + Exonic hg19 COAD TCGA-D5-6929 2 In-Frame Intra-chr q24.2 Oncogene Tumor suppressor gene q24.2 Seq+ 2970 ChimerSeq FusionScan TCGA_RNA-Seq FBXO46-SKI FBXO46 chr19 46234106 - SKI chr1 2234416 + Exonic hg19 COAD TCGA-AA-3851 2 5'UTR-CDS Inter-chr q13.32 p36.33 Transcription factor 2971 ChimerSeq FusionScan TCGA_RNA-Seq PSMD1-NHEJ1 PSMD1 chr2 232011070 + NHEJ1 chr2 220012517 - Exonic hg19 COAD TCGA-G4-6307 2 In-Frame Intra-chr q37.1 q35 Seq+ 2972 ChimerSeq FusionScan TCGA_RNA-Seq CARD17-CASP1 CARD17 chr11 104972134 - CASP1 chr11 104905201 - Exonic hg19 COAD TCGA-AA-3519 2 In-Frame Intra-chr q22.3 q22.3 2973 ChimerSeq FusionScan TCGA_RNA-Seq PYGB-C20orf152 PYGB chr20 25273249 + C20orf152 chr20 34575316 + Exonic hg19 COAD TCGA-AA-3660 8 In-Frame Intra-chr p11.21 Seq+ 2974 ChimerSeq FusionScan TCGA_RNA-Seq TTYH3-ADSSL1 TTYH3 chr7 2671912 + ADSSL1 chr14 105201356 + Exonic hg19 COAD TCGA-AA-A03J 2 In-Frame Inter-chr p22.3 q32.33 2975 ChimerSeq FusionScan TCGA_RNA-Seq PRCC-RRNAD1 PRCC chr1 156738031 + RRNAD1 chr1 156705516 + Exonic hg19 COAD TCGA-AA-3979 6 In-Frame Intra-chr q23.1 q23.1 Seq+ 2976 ChimerSeq FusionScan TCGA_RNA-Seq RBCK1-CLCN7 RBCK1 chr20 400375 + CLCN7 chr16 1509188 - Exonic hg19 COAD TCGA-AA-3979 2 In-Frame Inter-chr p13 Transcription factor p13.3 Seq+ 2977 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHG1-CCDC170 PLEKHG1 chr6 150971922 + CCDC170 chr6 151857452 + Exonic hg19 COAD TCGA-G4-6322 4 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 2978 ChimerSeq FusionScan TCGA_RNA-Seq MIB1-MYO5B MIB1 chr18 19438607 + MYO5B chr18 47406825 - Exonic hg19 COAD TCGA-G4-6322 3 In-Frame Intra-chr q11.2 q21.1 Seq+ 2979 ChimerSeq FusionScan TCGA_RNA-Seq EIF4ENIF1-COMT EIF4ENIF1 chr22 31867829 - COMT chr22 19948721 + Exonic hg19 COAD TCGA-A6-5657 4 CDS-5'UTR Intra-chr q12.2 q11.21 Seq+ 2980 ChimerSeq FusionScan TCGA_RNA-Seq BCAS3-CA10 BCAS3 chr17 58967132 + CA10 chr17 49731097 - Exonic hg19 COAD TCGA-A6-5657 2 In-Frame Intra-chr q23.2 q22 Seq+ 2981 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF7-ITM2B ARHGEF7 chr13 111926299 + ITM2B chr13 48832261 + Exonic hg19 COAD TCGA-AA-3561 2 In-Frame Intra-chr q34 q14.2 2982 ChimerSeq FusionScan TCGA_RNA-Seq FCGBP-ACSS2 FCGBP chr19 40376312 - ACSS2 chr20 33511125 + Exonic hg19 COAD TCGA-AA-A01Q 2 In-Frame Inter-chr q11.22 2983 ChimerSeq FusionScan TCGA_RNA-Seq CDC42-CELA3B CDC42 chr1 22379235 + CELA3B chr1 22307316 + Exonic hg19 COAD TCGA-G4-6588 2 5'UTR-CDS Intra-chr p36.12 p36.12 2984 ChimerSeq FusionScan TCGA_RNA-Seq CDC42-CELA3A CDC42 chr1 22379235 + CELA3A chr1 22331939 + Exonic hg19 COAD TCGA-G4-6588 2 5'UTR-CDS Intra-chr p36.12 p36.12 Seq+ 2985 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-HMGA1 RCC1 chr1 28834672 + HMGA1 chr6 34208513 + Exonic hg19 COAD TCGA-G4-6588 2 5'UTR-5'UTR Inter-chr p35.3 p21.31 Transcription factor Seq+ 2986 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD50-METTL14 ANKRD50 chr4 125631154 - METTL14 chr4 119609077 + Exonic hg19 COAD TCGA-CK-6746 2 Out-of-Frame Intra-chr q28.1 q26 2987 ChimerSeq FusionScan TCGA_RNA-Seq VTI1A-TCF7L2 VTI1A chr10 114224416 + TCF7L2 chr10 114900942 + Exonic hg19 COAD TCGA-AD-6963 2 In-Frame Intra-chr q25.2 q25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 2988 ChimerSeq FusionScan TCGA_RNA-Seq CDK12-LGALS9 CDK12 chr17 37657692 + LGALS9 chr17 25965288 + Exonic hg19 COAD TCGA-AZ-6600 3 Out-of-Frame Intra-chr q12 Oncogene q11.2 2989 ChimerSeq FusionScan TCGA_RNA-Seq SYBU-NUDCD1 SYBU chr8 110598288 - NUDCD1 chr8 110257710 - Exonic hg19 COAD TCGA-AZ-6600 2 Out-of-Frame Intra-chr q23.2 q23.1 Seq+ 2990 ChimerSeq FusionScan TCGA_RNA-Seq SYBU-NUDCD1 SYBU chr8 110631070 - NUDCD1 chr8 110257710 - Exonic hg19 COAD TCGA-AZ-6600 2 Out-of-Frame Intra-chr q23.2 q23.1 Seq+ 2991 ChimerSeq FusionScan TCGA_RNA-Seq KCNQ1-GALNTL6 KCNQ1 chr11 2799267 + GALNTL6 chr4 173930328 + Exonic hg19 COAD TCGA-D5-5538 2 In-Frame Inter-chr p15.5 q34.1 Seq+ 2992 ChimerSeq FusionScan TCGA_RNA-Seq NFX1-SMC5 NFX1 chr9 33290595 + SMC5 chr9 72920162 + Exonic hg19 COAD TCGA-A6-2677 3 Out-of-Frame Intra-chr p13.3 Transcription factor q21.12 2993 ChimerSeq FusionScan TCGA_RNA-Seq PTPRA-CDK5RAP1 PTPRA chr20 2854406 + CDK5RAP1 chr20 31975339 - Exonic hg19 COAD TCGA-A6-2677 3 5'UTR-CDS Intra-chr p13 q11.21 Seq+ 2994 ChimerSeq FusionScan TCGA_RNA-Seq CNOT2-GPCPD1 CNOT2 chr12 70736087 + GPCPD1 chr20 5548206 - Exonic hg19 COAD TCGA-A6-2677 3 In-Frame Inter-chr q15 p12.3 2995 ChimerSeq FusionScan TCGA_RNA-Seq IMPA1-TTC18 IMPA1 chr8 82598486 - TTC18 chr10 75059423 - Exonic hg19 COAD TCGA-A6-2677 2 5'UTR-CDS Inter-chr q21.13 2996 ChimerSeq FusionScan TCGA_RNA-Seq ATP9A-CXorf23 ATP9A chr20 50290691 - CXorf23 chrX 19935452 - Exonic hg19 COAD TCGA-A6-2677 2 Out-of-Frame Inter-chr q13.2 p22.12 2997 ChimerSeq FusionScan TCGA_RNA-Seq STK39-OXSR1 STK39 chr2 169018296 - OXSR1 chr3 38232221 + Exonic hg19 COAD TCGA-A6-2677 2 Out-of-Frame Inter-chr q24.3 p22.2 2998 ChimerSeq FusionScan TCGA_RNA-Seq TBX19-SFT2D2 TBX19 chr1 168262516 + SFT2D2 chr1 168204338 + Exonic hg19 COAD TCGA-A6-2677 2 Out-of-Frame Intra-chr q24.2 Transcription factor q24.2 2999 ChimerSeq FusionScan TCGA_RNA-Seq WDR37-GNAI3 WDR37 chr10 1102908 + GNAI3 chr1 110116358 + Exonic hg19 COAD TCGA-A6-2677 2 5'UTR-CDS Inter-chr p15.3 p13.3 3000 ChimerSeq FusionScan TCGA_RNA-Seq TRPC4AP-DYNLRB1 TRPC4AP chr20 33622925 - DYNLRB1 chr20 33128384 + Exonic hg19 COAD TCGA-A6-6782 9 In-Frame Intra-chr q11.22 q11.22 Seq+ 3001 ChimerSeq FusionScan TCGA_RNA-Seq AGAP1-CIR1 AGAP1 chr2 236715975 + CIR1 chr2 175252507 - Exonic hg19 COAD TCGA-AY-5543 7 In-Frame Intra-chr q37.2 q31.1 Seq+ 3002 ChimerSeq FusionScan TCGA_RNA-Seq SLC23A2-XRN2 SLC23A2 chr20 4951438 - XRN2 chr20 21319681 + Exonic hg19 COAD TCGA-AY-5543 2 5'UTR-CDS Intra-chr p13 p11.22 3003 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC7-TOR1A DNAJC7 chr17 40169357 - TOR1A chr9 132576501 - Exonic hg19 COAD TCGA-D5-6537 2 Out-of-Frame Inter-chr q21.2 q34.11 3004 ChimerSeq FusionScan TCGA_RNA-Seq DNMT1-ELAVL3 DNMT1 chr19 10264968 - ELAVL3 chr19 11569426 - Exonic hg19 COAD TCGA-AA-A00Z 2 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene Transcription factor p13.2 Seq+ 3005 ChimerSeq FusionScan TCGA_RNA-Seq CISD3-STARD3 CISD3 chr17 36887048 + STARD3 chr17 37813260 + Exonic hg19 COAD TCGA-AA-3994 5 In-Frame Intra-chr q12 Seq+ 3006 ChimerSeq FusionScan TCGA_RNA-Seq WIPF2-TUBD1 WIPF2 chr17 38375744 + TUBD1 chr17 57944110 - Exonic hg19 COAD TCGA-AA-3994 2 5'UTR-CDS Intra-chr q21.2 q23.1 Seq+ 3007 ChimerSeq FusionScan TCGA_RNA-Seq NAPG-MICAL3 NAPG chr18 10526155 + MICAL3 chr22 18389652 - Exonic hg19 COAD TCGA-A6-6780 2 CDS-5'UTR Inter-chr p11.22 q11.21 3008 ChimerSeq FusionScan TCGA_RNA-Seq LRP4-DDB2 LRP4 chr11 46914523 - DDB2 chr11 47260350 + Exonic hg19 COAD TCGA-A6-6780 2 Out-of-Frame Intra-chr p11.2 p11.2 Oncogene Tumor suppressor gene 3009 ChimerSeq FusionScan TCGA_RNA-Seq CCDC47-PMPCA CCDC47 chr17 61843271 - PMPCA chr9 139311402 + Exonic hg19 COAD TCGA-A6-6780 2 In-Frame Inter-chr q23.3 q34.3 3010 ChimerSeq FusionScan TCGA_RNA-Seq CHMP3-SH3BGRL2 CHMP3 chr2 86790426 - SH3BGRL2 chr6 80383330 + Exonic hg19 COAD TCGA-AA-3870 2 In-Frame Inter-chr p11.2 q14.1 3011 ChimerSeq FusionScan TCGA_RNA-Seq PDE4C-KIAA1683 PDE4C chr19 18343759 - KIAA1683 chr19 18368916 - Exonic hg19 COAD TCGA-D5-6541 3 Out-of-Frame Intra-chr p13.11 p13.11 Seq+ 3012 ChimerSeq FusionScan TCGA_RNA-Seq USP15-RPAP3 USP15 chr12 62654284 + RPAP3 chr12 48057373 - Exonic hg19 COAD TCGA-AA-3538 2 Out-of-Frame Intra-chr q14.1 q13.11 3013 ChimerSeq FusionScan TCGA_RNA-Seq EEF1D-HN1L EEF1D chr8 144679517 - HN1L chr16 1735439 + Exonic hg19 COAD TCGA-DM-A0XD 2 5'UTR-CDS Inter-chr 3014 ChimerSeq FusionScan TCGA_RNA-Seq MPP5-EIF2S1 MPP5 chr14 67708250 + EIF2S1 chr14 67831483 + Exonic hg19 COAD TCGA-DM-A0XD 2 5'UTR-5'UTR Intra-chr q23.3 q23.3 3015 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-TUBE1 RCC1 chr1 28832596 + TUBE1 chr6 112396053 - Exonic hg19 COAD TCGA-DM-A0XD 2 5'UTR-CDS Inter-chr p35.3 q21 3016 ChimerSeq FusionScan TCGA_RNA-Seq SLCO3A1-ATPBD4 SLCO3A1 chr15 92669489 + ATPBD4 chr15 35834708 - Exonic hg19 COAD TCGA-CM-5348 3 In-Frame Intra-chr q26.1 Seq+ 3017 ChimerSeq FusionScan TCGA_RNA-Seq YWHAE-ERCC8 YWHAE chr17 1303340 - ERCC8 chr5 60224786 - Exonic hg19 COAD TCGA-CM-5348 3 Out-of-Frame Inter-chr p13.3 q12.1 Seq+ 3018 ChimerSeq FusionScan TCGA_RNA-Seq ATP5A1-HAUS1 ATP5A1 chr18 43684102 - HAUS1 chr18 43699891 + Exonic hg19 COAD TCGA-CM-5348 2 5'UTR-5'UTR Intra-chr q21.1 q21.1 Seq+ 3019 ChimerSeq FusionScan TCGA_RNA-Seq DANCR-RHOA DANCR chr4 53579126 + RHOA chr3 49413024 - Exonic hg19 COAD TCGA-AA-3530 2 5'UTR-5'UTR Inter-chr q12 p21.31 Oncogene Tumor suppressor gene 3020 ChimerSeq FusionScan TCGA_RNA-Seq ABHD12-PPP2R2A ABHD12 chr20 25295560 - PPP2R2A chr8 26196405 + Exonic hg19 COAD TCGA-CM-5860 4 In-Frame Inter-chr p11.21 p21.2 Seq+ 3021 ChimerSeq FusionScan TCGA_RNA-Seq NFAT5-VPS4A NFAT5 chr16 69600277 + VPS4A chr16 69349910 + Exonic hg19 COAD TCGA-CM-5860 2 Out-of-Frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 3022 ChimerSeq FusionScan TCGA_RNA-Seq THRA-MED24 THRA chr17 38241068 + MED24 chr17 38192407 - Exonic hg19 COAD TCGA-AA-A02O 7 In-Frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Seq+ 3023 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0195-LLGL2 KIAA0195 chr17 73452832 + LLGL2 chr17 73552126 + Exonic hg19 COAD TCGA-AZ-6601 2 5'UTR-CDS Intra-chr q25.1 3024 ChimerSeq FusionScan TCGA_RNA-Seq MUC13-TMEM48 MUC13 chr3 124653504 - TMEM48 chr1 54252931 - Exonic hg19 COAD TCGA-AA-3949 2 In-Frame Inter-chr q21.2 3025 ChimerSeq FusionScan TCGA_RNA-Seq TAOK1-VMP1 TAOK1 chr17 27844674 + VMP1 chr17 57842331 + Exonic hg19 COAD TCGA-AZ-4323 3 In-Frame Intra-chr q11.2 q23.1 Seq+ 3026 ChimerSeq FusionScan TCGA_RNA-Seq MBD2-C18orf42 MBD2 chr18 51750387 - C18orf42 chr18 5145754 - Exonic hg19 COAD TCGA-G4-6314 2 Out-of-Frame Intra-chr q21.2 Transcription factor Seq+ 3027 ChimerSeq FusionScan TCGA_RNA-Seq PANK2-PAK7 PANK2 chr20 3870375 + PAK7 chr20 9624987 - Exonic hg19 COAD TCGA-DM-A1HA 2 CDS-5'UTR Intra-chr p13 Seq+ 3028 ChimerSeq FusionScan TCGA_RNA-Seq PTP4A3-DKFZP434K028 PTP4A3 chr8 142437924 + DKFZP434K028 chr11 61523168 - Exonic hg19 COAD TCGA-CM-6172 3 CDS-3'UTR Inter-chr q24.3 q12.2 Seq+ 3029 ChimerSeq FusionScan TCGA_RNA-Seq ZFX-GLYATL2 ZFX chrX 24170947 + GLYATL2 chr11 58611997 - Exonic hg19 COAD TCGA-CM-6172 3 5'UTR-5'UTR Inter-chr p22.11 Transcription factor q12.1 Seq+ 3030 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0146-ANK1 KIAA0146 chr8 48614577 + ANK1 chr8 41615655 - Exonic hg19 COAD TCGA-CM-6172 2 In-Frame Intra-chr p11.21 Seq+ 3031 ChimerSeq FusionScan TCGA_RNA-Seq CHD7-TOX CHD7 chr8 61655656 + TOX chr8 59872567 - Exonic hg19 COAD TCGA-CM-6172 2 In-Frame Intra-chr q12.2 q12.1 Seq+ 3032 ChimerSeq FusionScan TCGA_RNA-Seq TADA3-PRPF6 TADA3 chr3 9826999 - PRPF6 chr20 62663270 + Exonic hg19 COAD TCGA-CM-4750 2 In-Frame Inter-chr p25.3 q13.33 3033 ChimerSeq FusionScan TCGA_RNA-Seq ADNP-RAE1 ADNP chr20 49547362 - RAE1 chr20 55953068 + Exonic hg19 COAD TCGA-CM-4750 2 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.31 3034 ChimerSeq FusionScan TCGA_RNA-Seq CARD17-CASP1 CARD17 chr11 104972134 - CASP1 chr11 104905201 - Exonic hg19 COAD TCGA-A6-4107 3 In-Frame Intra-chr q22.3 q22.3 3035 ChimerSeq FusionScan TCGA_RNA-Seq DDX49-RPLP1 DDX49 chr19 19037186 + RPLP1 chr15 69747508 + Exonic hg19 DLBC TCGA-FA-8693 2 Out-of-Frame Inter-chr p13.11 q23 3036 ChimerSeq FusionScan TCGA_RNA-Seq BCL6-RHOH BCL6 chr3 187463197 - RHOH chr4 40244333 + Exonic hg19 DLBC TCGA-G8-6906 2 5'UTR-5'UTR Inter-chr q27.3 Oncogene Transcription factor p14 Oncogene KB Seq+ 3037 ChimerSeq FusionScan TCGA_RNA-Seq AICDA-SLC9A7 AICDA chr12 8765355 - SLC9A7 chrX 46541970 - Exonic hg19 DLBC TCGA-GS-A9TW 5 Out-of-Frame Inter-chr p13.31 p11.3 Seq+ 3038 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-TP73 TBL1XR1 chr3 176771560 - TP73 chr1 3624112 + Exonic hg19 DLBC TCGA-FA-A4XK 3 In-Frame Inter-chr q26.32 p36.32 Tumor suppressor gene Transcription factor Seq+ 3039 ChimerSeq FusionScan TCGA_RNA-Seq CXCR4-CFLAR CXCR4 chr2 136875615 - CFLAR chr2 201994451 + Exonic hg19 DLBC TCGA-FA-A6HN 4 CDS-5'UTR Intra-chr q22.1 q33.1 Seq+ 3040 ChimerSeq FusionScan TCGA_RNA-Seq HOXB6-PITPNC1 HOXB6 chr17 46681841 - PITPNC1 chr17 65528917 + Exonic hg19 DLBC TCGA-FF-8047 2 5'UTR-CDS Intra-chr q21.32 Transcription factor q24.2 Seq+ 3041 ChimerSeq FusionScan TCGA_RNA-Seq WARS2-RPF1 WARS2 chr1 119683177 - RPF1 chr1 84961564 + Exonic hg19 DLBC TCGA-GR-7353 2 In-Frame Intra-chr p12 p22.3 Tumor suppressor gene Seq+ 3042 ChimerSeq FusionScan TCGA_RNA-Seq CIITA-PRDM16 CIITA chr16 10971239 + PRDM16 chr1 3301715 + Exonic hg19 DLBC TCGA-GS-A9TZ 7 Out-of-Frame Inter-chr p13.13 p36.32 Transcription factor Seq+ 3043 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF10L-ORM1 ARHGEF10L chr1 17966797 + ORM1 chr9 117088571 + Exonic hg19 DLBC TCGA-G8-6325 2 Out-of-Frame Inter-chr p36.13 q32 3044 ChimerSeq FusionScan TCGA_RNA-Seq RAF1-EIF3L RAF1 chr3 12660013 - EIF3L chr22 38282771 + Exonic hg19 DLBC TCGA-G8-6325 2 In-Frame Inter-chr p25.2 TKL:RAF Oncogene q13.1 Seq+ 3045 ChimerSeq FusionScan TCGA_RNA-Seq RFC1-PDS5A RFC1 chr4 39328182 - PDS5A chr4 39827108 - Exonic hg19 DLBC TCGA-GS-A9TV 4 Out-of-Frame Intra-chr p14 p14 Seq+ 3046 ChimerSeq FusionScan TCGA_RNA-Seq ATAD5-IKZF3 ATAD5 chr17 29196664 + IKZF3 chr17 37922746 - Exonic hg19 ESCA TCGA-L5-A4OU 15 In-Frame Intra-chr q11.2 q21.1 Tumor suppressor gene Transcription factor Seq+ 3047 ChimerSeq FusionScan TCGA_RNA-Seq MICALL2-ZFAND2A MICALL2 chr7 1498819 - ZFAND2A chr7 1197893 - Exonic hg19 ESCA TCGA-L5-A4OU 5 CDS-5'UTR Intra-chr p22.3 p22.3 Seq+ 3048 ChimerSeq FusionScan TCGA_RNA-Seq MAP2K4-PRR11 MAP2K4 chr17 11958308 + PRR11 chr17 57262414 + Exonic hg19 ESCA TCGA-L5-A4OU 4 In-Frame Intra-chr p12 STE:STE7 Oncogene Tumor suppressor gene q22 Seq+ 3049 ChimerSeq FusionScan TCGA_RNA-Seq HIPK2-CPSF4 HIPK2 chr7 139477403 - CPSF4 chr7 99042411 + Exonic hg19 ESCA TCGA-L5-A4OU 4 In-Frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q22.1 Seq+ 3050 ChimerSeq FusionScan TCGA_RNA-Seq ITCH-DYNLRB1 ITCH chr20 33059320 + DYNLRB1 chr20 33114072 + Exonic hg19 ESCA TCGA-2H-A9GK 20 In-Frame Intra-chr q11.22 q11.22 Seq+ 3051 ChimerSeq FusionScan TCGA_RNA-Seq TIMM17B-PQBP1 TIMM17B chrX 48755349 - PQBP1 chrX 48755212 + Exonic hg19 ESCA TCGA-2H-A9GK 2 5'UTR-5'UTR Intra-chr p11.23 p11.23 Seq+ 3052 ChimerSeq FusionScan TCGA_RNA-Seq TLK2-SLC38A10 TLK2 chr17 60629758 + SLC38A10 chr17 79256132 - Exonic hg19 ESCA TCGA-2H-A9GK 2 In-Frame Intra-chr q23.2 Other:TLK q25.3 3053 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 ESCA TCGA-2H-A9GK 2 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 3054 ChimerSeq FusionScan TCGA_RNA-Seq RSU1-SRD5A1 RSU1 chr10 16737021 - SRD5A1 chr5 6668314 + Exonic hg19 ESCA TCGA-R6-A6DN 2 CDS-3'UTR Inter-chr p13 p15.31 3055 ChimerSeq FusionScan TCGA_RNA-Seq AHI1-TMEM182 AHI1 chr6 135639656 - TMEM182 chr2 103379045 + Exonic hg19 ESCA TCGA-R6-A6DN 2 In-Frame Inter-chr q23.3 q12.1 3056 ChimerSeq FusionScan TCGA_RNA-Seq EHF-BDNF EHF chr11 34673352 + BDNF chr11 27680132 - Exonic hg19 ESCA TCGA-R6-A6DN 2 Out-of-Frame Intra-chr p13 Tumor suppressor gene Transcription factor p14.1 Seq+ 3057 ChimerSeq FusionScan TCGA_RNA-Seq EHF-BDNF EHF chr11 34673157 + BDNF chr11 27680132 - Exonic hg19 ESCA TCGA-R6-A6DN 2 Out-of-Frame Intra-chr p13 Tumor suppressor gene Transcription factor p14.1 Seq+ 3058 ChimerSeq FusionScan TCGA_RNA-Seq NFE2L3-CBX3 NFE2L3 chr7 26192688 + CBX3 chr7 26245987 + Exonic hg19 ESCA TCGA-V5-AASX 2 In-Frame Intra-chr p15.2 Transcription factor p15.2 3059 ChimerSeq FusionScan TCGA_RNA-Seq GCNT2-LTBP4 GCNT2 chr6 10530069 + LTBP4 chr19 41120220 + Exonic hg19 ESCA TCGA-V5-AASX 2 Out-of-Frame Inter-chr p24.3 q13.2 3060 ChimerSeq FusionScan TCGA_RNA-Seq CDC42EP5-ATP2C1 CDC42EP5 chr19 54982765 - ATP2C1 chr3 130698092 + Exonic hg19 ESCA TCGA-V5-AASX 2 5'UTR-CDS Inter-chr q22.1 3061 ChimerSeq FusionScan TCGA_RNA-Seq PRKAA1-SIN3A PRKAA1 chr5 40777546 - SIN3A chr15 75685156 - Exonic hg19 ESCA TCGA-V5-AASX 2 Out-of-Frame Inter-chr p13.1 Tumor suppressor gene q24.2 3062 ChimerSeq FusionScan TCGA_RNA-Seq FOXN3-UBQLN1 FOXN3 chr14 90085371 - UBQLN1 chr9 86284242 - Exonic hg19 ESCA TCGA-V5-AASX 2 5'UTR-CDS Inter-chr q32.11 Transcription factor q21.32 3063 ChimerSeq FusionScan TCGA_RNA-Seq CDKL1-DNM2 CDKL1 chr14 50862418 - DNM2 chr19 10939711 + Exonic hg19 ESCA TCGA-V5-AASX 2 In-Frame Inter-chr q22.1 CMGC:CDKL p13.2 3064 ChimerSeq FusionScan TCGA_RNA-Seq FAM35A-SEZ6L2 FAM35A chr10 88856746 + SEZ6L2 chr16 29897070 - Exonic hg19 ESCA TCGA-V5-AASX 2 5'UTR-CDS Inter-chr q23.2 p11.2 Seq+ 3065 ChimerSeq FusionScan TCGA_RNA-Seq SPSB3-ECI1 SPSB3 chr16 1832502 - ECI1 chr16 2293225 - Exonic hg19 ESCA TCGA-L5-A8NE 9 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 3066 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0284-C1orf135 KIAA0284 chr14 105331850 + C1orf135 chr1 26164045 - Exonic hg19 ESCA TCGA-L5-A8NE 9 5'UTR-CDS Inter-chr Seq+ 3067 ChimerSeq FusionScan TCGA_RNA-Seq PSMG2-OSBPL1A PSMG2 chr18 12703163 + OSBPL1A chr18 21914294 - Exonic hg19 ESCA TCGA-L5-A8NE 7 Out-of-Frame Intra-chr p11.21 q11.2 Seq+ 3068 ChimerSeq FusionScan TCGA_RNA-Seq FA2H-KARS FA2H chr16 74773920 - KARS chr16 75665753 - Exonic hg19 ESCA TCGA-L5-A8NE 7 In-Frame Intra-chr q23.1 q23.1 Seq+ 3069 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHA7-USH1C PLEKHA7 chr11 17035535 - USH1C chr11 17523527 - Exonic hg19 ESCA TCGA-L5-A8NE 6 Out-of-Frame Intra-chr p15.1 p15.1 Seq+ 3070 ChimerSeq FusionScan TCGA_RNA-Seq ATP6V0E1-ERGIC1 ATP6V0E1 chr5 172410967 + ERGIC1 chr5 172315701 + Exonic hg19 ESCA TCGA-L5-A8NE 6 In-Frame Intra-chr q35.1 q35.1 Seq+ 3071 ChimerSeq FusionScan TCGA_RNA-Seq CCT4-BIRC6 CCT4 chr2 62107420 - BIRC6 chr2 32756421 + Exonic hg19 ESCA TCGA-L5-A8NE 6 In-Frame Intra-chr p15 p22.3 Seq+ 3072 ChimerSeq FusionScan TCGA_RNA-Seq IP6K1-UBA7 IP6K1 chr3 49823786 - UBA7 chr3 49847616 - Exonic hg19 ESCA TCGA-L5-A8NE 5 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 3073 ChimerSeq FusionScan TCGA_RNA-Seq C6orf147-SLC17A5 C6orf147 chr6 74001720 - SLC17A5 chr6 74325170 - Exonic hg19 ESCA TCGA-L5-A8NE 3 3'UTR-CDS Intra-chr q13 3074 ChimerSeq FusionScan TCGA_RNA-Seq PPFIA1-XRRA1 PPFIA1 chr11 70118542 + XRRA1 chr11 74559507 - Exonic hg19 ESCA TCGA-L5-A8NE 3 In-Frame Intra-chr q13.3 q13.4 Seq+ 3075 ChimerSeq FusionScan TCGA_RNA-Seq NPR2-BAIAP2 NPR2 chr9 35807395 + BAIAP2 chr17 79073727 + Exonic hg19 ESCA TCGA-L5-A8NE 3 In-Frame Inter-chr p13.3 Tumor suppressor gene q25.3 3076 ChimerSeq FusionScan TCGA_RNA-Seq CWC25-C17orf98 CWC25 chr17 36981418 - C17orf98 chr17 36993493 - Exonic hg19 ESCA TCGA-L5-A8NE 3 In-Frame Intra-chr q12 q12 Seq+ 3077 ChimerSeq FusionScan TCGA_RNA-Seq PPFIA1-XRRA1 PPFIA1 chr11 70118542 + XRRA1 chr11 74574066 - Exonic hg19 ESCA TCGA-L5-A8NE 2 Out-of-Frame Intra-chr q13.3 q13.4 Seq+ 3078 ChimerSeq FusionScan TCGA_RNA-Seq BAZ2B-ITGB6 BAZ2B chr2 160472752 - ITGB6 chr2 161030650 - Exonic hg19 ESCA TCGA-L5-A8NE 2 5'UTR-CDS Intra-chr q24.2 Transcription factor q24.2 Seq+ 3079 ChimerSeq FusionScan TCGA_RNA-Seq ARRDC1-EHMT1 ARRDC1 chr9 140509452 + EHMT1 chr9 140611077 + Exonic hg19 ESCA TCGA-L5-A8NE 2 In-Frame Intra-chr q34.3 q34.3 Seq+ 3080 ChimerSeq FusionScan TCGA_RNA-Seq IL17RD-ARHGEF3 IL17RD chr3 57131623 - ARHGEF3 chr3 57069204 - Exonic hg19 ESCA TCGA-L5-A8NE 2 CDS-5'UTR Intra-chr p14.3 Tumor suppressor gene p14.3 3081 ChimerSeq FusionScan TCGA_RNA-Seq COPZ1-FLJ12825 COPZ1 chr12 54718965 + FLJ12825 chr12 54512387 + Exonic hg19 ESCA TCGA-L5-A8NE 2 CDS-5'UTR Intra-chr q13.13 q13.13 3082 ChimerSeq FusionScan TCGA_RNA-Seq IP6K1-UBA7 IP6K1 chr3 49823786 - UBA7 chr3 49848105 - Exonic hg19 ESCA TCGA-L5-A8NE 2 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 3083 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPL-TBCB HNRNPL chr19 39342935 - TBCB chr19 36606942 + Exonic hg19 ESCA TCGA-L5-A8NE 2 5'UTR-CDS Intra-chr q13.12 3084 ChimerSeq FusionScan TCGA_RNA-Seq ADIPOR2-CASK ADIPOR2 chr12 1800357 + CASK chrX 41383287 - Exonic hg19 ESCA TCGA-L5-A43M 9 5'UTR-CDS Inter-chr p13.33 p11.4 CAMK:CASK Seq+ 3085 ChimerSeq FusionScan TCGA_RNA-Seq SMAGP-TBC1D30 SMAGP chr12 51663028 - TBC1D30 chr12 65237159 + Exonic hg19 ESCA TCGA-L5-A43M 7 Out-of-Frame Intra-chr q13.13 q14.3 Seq+ 3086 ChimerSeq FusionScan TCGA_RNA-Seq PDGFA-PRKAR1B PDGFA chr7 550445 - PRKAR1B chr7 619014 - Exonic hg19 ESCA TCGA-L5-A43M 5 Out-of-Frame Intra-chr p22.3 p22.3 Seq+ 3087 ChimerSeq FusionScan TCGA_RNA-Seq PPM1H-WIF1 PPM1H chr12 63087715 - WIF1 chr12 65471634 - Exonic hg19 ESCA TCGA-L5-A43M 4 In-Frame Intra-chr q14.2 q14.3 Tumor suppressor gene Seq+ 3088 ChimerSeq FusionScan TCGA_RNA-Seq CTDSP2-MAGEB16 CTDSP2 chr12 58240154 - MAGEB16 chrX 35820247 + Exonic hg19 ESCA TCGA-L5-A43M 3 CDS-5'UTR Inter-chr q14.1 p21.1 Seq+ 3089 ChimerSeq FusionScan TCGA_RNA-Seq C21orf15-FAM95B1 C21orf15 chr21 15219079 - FAM95B1 chr9 42473935 + Exonic hg19 ESCA TCGA-L5-A43M 2 3'UTR-5'UTR Inter-chr p11.2 3090 ChimerSeq FusionScan TCGA_RNA-Seq CNOT2-TMBIM4 CNOT2 chr12 70637260 + TMBIM4 chr12 66547228 - Exonic hg19 ESCA TCGA-L5-A43M 2 5'UTR-CDS Intra-chr q15 q14.3 3091 ChimerSeq FusionScan TCGA_RNA-Seq PPP6R1-SGK110 PPP6R1 chr19 55741980 - SGK110 chr19 56052892 - Exonic hg19 ESCA TCGA-L5-A43M 2 Out-of-Frame Intra-chr q13.42 3092 ChimerSeq FusionScan TCGA_RNA-Seq CSNK1A1-PDE6A CSNK1A1 chr5 148885009 - PDE6A chr5 149264430 - Exonic hg19 ESCA TCGA-L5-A43M 2 Out-of-Frame Intra-chr q32 Tumor suppressor gene q32 Seq+ 3093 ChimerSeq FusionScan TCGA_RNA-Seq WIF1-PAG1 WIF1 chr12 65456260 - PAG1 chr8 81905542 - Exonic hg19 ESCA TCGA-L5-A43M 2 CDS-5'UTR Inter-chr q14.3 Tumor suppressor gene q21.13 3094 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 ESCA TCGA-L5-A43M 2 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 3095 ChimerSeq FusionScan TCGA_RNA-Seq IQGAP3-ARHGEF11 IQGAP3 chr1 156509165 - ARHGEF11 chr1 156950278 - Exonic hg19 ESCA TCGA-L5-A43M 2 Out-of-Frame Intra-chr q22 q23.1 3096 ChimerSeq FusionScan TCGA_RNA-Seq TRA2A-ATP2A2 TRA2A chr7 23571407 - ATP2A2 chr12 110729824 + Exonic hg19 ESCA TCGA-L5-A43M 2 In-Frame Inter-chr p15.3 q24.11 3097 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 ESCA TCGA-LN-A49K 4 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 3098 ChimerSeq FusionScan TCGA_RNA-Seq ABI2-MKI67 ABI2 chr2 204281804 + MKI67 chr10 129917583 - Exonic hg19 ESCA TCGA-LN-A49K 2 Out-of-Frame Inter-chr q33.2 Tumor suppressor gene q26.2 3099 ChimerSeq FusionScan TCGA_RNA-Seq CAP2-CALM1 CAP2 chr6 17421907 + CALM1 chr14 90870205 + Exonic hg19 ESCA TCGA-LN-A49K 2 In-Frame Inter-chr p22.3 q32.11 3100 ChimerSeq FusionScan TCGA_RNA-Seq NSUN3-ALCAM NSUN3 chr3 93813998 + ALCAM chr3 105238910 + Exonic hg19 ESCA TCGA-LN-A49K 2 Out-of-Frame Intra-chr q11.2 q13.11 3101 ChimerSeq FusionScan TCGA_RNA-Seq ZMYM2-MTIF3 ZMYM2 chr13 20580726 + MTIF3 chr13 28010030 - Exonic hg19 ESCA TCGA-LN-A49K 2 In-Frame Intra-chr q12.11 q12.2 3102 ChimerSeq FusionScan TCGA_RNA-Seq VEZF1-KRT222 VEZF1 chr17 56065439 - KRT222 chr17 38816459 - Exonic hg19 ESCA TCGA-JY-A6FB 7 In-Frame Intra-chr q22 Transcription factor q21.2 Seq+ 3103 ChimerSeq FusionScan TCGA_RNA-Seq CD2AP-FAM69A CD2AP chr6 47445984 + FAM69A chr1 93341987 - Exonic hg19 ESCA TCGA-JY-A6FB 6 Out-of-Frame Inter-chr p12.3 p22.1 Seq+ 3104 ChimerSeq FusionScan TCGA_RNA-Seq FOXP4-UBR2 FOXP4 chr6 41555635 + UBR2 chr6 42573458 + Exonic hg19 ESCA TCGA-JY-A6FB 3 In-Frame Intra-chr p21.1 Oncogene Transcription factor p21.1 Seq+ 3105 ChimerSeq FusionScan TCGA_RNA-Seq SLC29A2-PCBP2 SLC29A2 chr11 66133406 - PCBP2 chr12 53854798 + Exonic hg19 ESCA TCGA-JY-A6FB 2 In-Frame Inter-chr q13.2 q13.13 3106 ChimerSeq FusionScan TCGA_RNA-Seq WDR59-RARA WDR59 chr16 74982416 - RARA chr17 38487108 + Exonic hg19 ESCA TCGA-L5-A43C 2 CDS-5'UTR Inter-chr q23.1 q21.2 Oncogene Transcription factor 3107 ChimerSeq FusionScan TCGA_RNA-Seq MAGOHB-CSDA MAGOHB chr12 10762429 - CSDA chr12 10865932 - Exonic hg19 ESCA TCGA-L5-A43C 2 In-Frame Intra-chr p13.2 3108 ChimerSeq FusionScan TCGA_RNA-Seq KDM4B-RNF126 KDM4B chr19 5144913 + RNF126 chr19 652884 - Exonic hg19 ESCA TCGA-L5-A43C 2 In-Frame Intra-chr p13.3 p13.3 3109 ChimerSeq FusionScan TCGA_RNA-Seq AXIN1-TMEM8A AXIN1 chr16 347055 - TMEM8A chr16 422727 - Exonic hg19 ESCA TCGA-L5-A43C 2 Out-of-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 3110 ChimerSeq FusionScan TCGA_RNA-Seq GLCE-NOX5 GLCE chr15 69502745 + NOX5 chr15 69347673 + Exonic hg19 ESCA TCGA-L5-A43C 2 5'UTR-5'UTR Intra-chr q23 q23 Seq+ 3111 ChimerSeq FusionScan TCGA_RNA-Seq DDX50-STOX1 DDX50 chr10 70679737 + STOX1 chr10 70652344 + Exonic hg19 ESCA TCGA-R6-A6Y0 8 In-Frame Intra-chr q22.1 q22.1 Seq+ 3112 ChimerSeq FusionScan TCGA_RNA-Seq RALGAPB-CTNNBL1 RALGAPB chr20 37169835 + CTNNBL1 chr20 36488300 + Exonic hg19 ESCA TCGA-R6-A6Y0 6 Out-of-Frame Intra-chr q11.23 q11.23 Seq+ 3113 ChimerSeq FusionScan TCGA_RNA-Seq MPP5-GPHN MPP5 chr14 67784196 + GPHN chr14 67555699 + Exonic hg19 ESCA TCGA-R6-A6Y0 4 In-Frame Intra-chr q23.3 q23.3 Seq+ 3114 ChimerSeq FusionScan TCGA_RNA-Seq RNF24-SNRPD3 RNF24 chr20 3996083 - SNRPD3 chr22 24963951 + Exonic hg19 ESCA TCGA-R6-A6Y0 4 5'UTR-CDS Inter-chr p13 q11.23 Seq+ 3115 ChimerSeq FusionScan TCGA_RNA-Seq MAPKAPK2-SRGAP2P2 MAPKAPK2 chr1 206858853 + SRGAP2P2 chr1 144094361 + Exonic hg19 ESCA TCGA-R6-A6Y0 3 CDS-5'UTR Intra-chr q32.1 CAMK:MAPKAPK 3116 ChimerSeq FusionScan TCGA_RNA-Seq GNE-LOH12CR1 GNE chr9 36218179 - LOH12CR1 chr12 12588561 + Exonic hg19 ESCA TCGA-R6-A6Y0 2 In-Frame Inter-chr p13.3 3117 ChimerSeq FusionScan TCGA_RNA-Seq USP18-PPP2R5E USP18 chr22 18632989 + PPP2R5E chr14 63888812 - Exonic hg19 ESCA TCGA-R6-A6Y0 2 5'UTR-CDS Inter-chr q11.21 q23.2 3118 ChimerSeq FusionScan TCGA_RNA-Seq AZI1-NPLOC4 AZI1 chr17 79163714 - NPLOC4 chr17 79534559 - Exonic hg19 ESCA TCGA-R6-A6Y0 2 In-Frame Intra-chr q25.3 3119 ChimerSeq FusionScan TCGA_RNA-Seq NFKB1-PDLIM5 NFKB1 chr4 103459113 + PDLIM5 chr4 95494501 + Exonic hg19 ESCA TCGA-R6-A6Y0 2 Out-of-Frame Intra-chr q24 Oncogene Tumor suppressor gene Transcription factor q22.3 3120 ChimerSeq FusionScan TCGA_RNA-Seq GNB2L1-MAP4 GNB2L1 chr5 180666066 - MAP4 chr3 47913590 - Exonic hg19 ESCA TCGA-R6-A6Y0 2 In-Frame Inter-chr Tumor suppressor gene p21.31 3121 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB43-RALGPS1 ZBTB43 chr9 129571194 + RALGPS1 chr9 129724503 + Exonic hg19 ESCA TCGA-R6-A6Y0 2 5'UTR-5'UTR Intra-chr q33.3 Transcription factor q33.3 3122 ChimerSeq FusionScan TCGA_RNA-Seq SPRR3-SERINC2 SPRR3 chr1 152974269 + SERINC2 chr1 31905813 + Exonic hg19 ESCA TCGA-R6-A6Y0 2 5'UTR-CDS Intra-chr q21.3 p35.2 3123 ChimerSeq FusionScan TCGA_RNA-Seq NT5C2-RIPK4 NT5C2 chr10 104899162 - RIPK4 chr21 43169363 - Exonic hg19 ESCA TCGA-R6-A6Y0 2 Out-of-Frame Inter-chr q24.33 q22.3 3124 ChimerSeq FusionScan TCGA_RNA-Seq PRKAR1B-SUN1 PRKAR1B chr7 766846 - SUN1 chr7 872141 + Exonic hg19 ESCA TCGA-R6-A6Y0 2 5'UTR-5'UTR Intra-chr p22.3 p22.3 3125 ChimerSeq FusionScan TCGA_RNA-Seq TACC2-PPAPDC1A TACC2 chr10 123848106 + PPAPDC1A chr10 122348814 + Exonic hg19 ESCA TCGA-R6-A6Y0 2 Out-of-Frame Intra-chr q26.13 Seq+ 3126 ChimerSeq FusionScan TCGA_RNA-Seq SPRED2-RAB1A SPRED2 chr2 65659095 - RAB1A chr2 65331940 - Exonic hg19 ESCA TCGA-R6-A6Y0 2 In-Frame Intra-chr p14 p14 Seq+ 3127 ChimerSeq FusionScan TCGA_RNA-Seq UBP1-TFCP2L1 UBP1 chr3 33453072 - TFCP2L1 chr2 122004546 - Exonic hg19 ESCA TCGA-R6-A6Y0 2 In-Frame Inter-chr p22.3 Transcription factor q14.2 Transcription factor 3128 ChimerSeq FusionScan TCGA_RNA-Seq UVRAG-RPS3 UVRAG chr11 75572825 + RPS3 chr11 75111737 + Exonic hg19 ESCA TCGA-R6-A6Y0 2 In-Frame Intra-chr q13.5 Tumor suppressor gene q13.4 3129 ChimerSeq FusionScan TCGA_RNA-Seq ATG7-PIGG ATG7 chr3 11356967 + PIGG chr4 509761 + Exonic hg19 ESCA TCGA-R6-A6XQ 3 Out-of-Frame Inter-chr p25.3 p16.3 3130 ChimerSeq FusionScan TCGA_RNA-Seq SBF2-ANO3 SBF2 chr11 10215448 - ANO3 chr11 26663442 + Exonic hg19 ESCA TCGA-R6-A6XQ 3 Out-of-Frame Intra-chr p15.4 p14.2 3131 ChimerSeq FusionScan TCGA_RNA-Seq TSPAN14-CTBP2 TSPAN14 chr10 82249070 + CTBP2 chr10 126799662 - Exonic hg19 ESCA TCGA-R6-A6XQ 2 CDS-5'UTR Intra-chr q23.1 q26.13 3132 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R12C-GAK PPP1R12C chr19 55610151 - GAK chr4 898567 - Exonic hg19 ESCA TCGA-R6-A6XQ 2 Out-of-Frame Inter-chr q13.42 p16.3 Other:NAK 3133 ChimerSeq FusionScan TCGA_RNA-Seq ATP6V0A1-NGRN ATP6V0A1 chr17 40666478 + NGRN chr15 90814419 + Exonic hg19 ESCA TCGA-R6-A6XQ 2 In-Frame Inter-chr q21.2 q26.1 3134 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D8-TUT1 TBC1D8 chr2 101706715 - TUT1 chr11 62356693 - Exonic hg19 ESCA TCGA-R6-A6XQ 2 In-Frame Inter-chr q11.2 q12.3 3135 ChimerSeq FusionScan TCGA_RNA-Seq HMGCR-TAF11 HMGCR chr5 74638595 + TAF11 chr6 34846497 - Exonic hg19 ESCA TCGA-R6-A6XQ 2 Out-of-Frame Inter-chr q13.3 p21.31 3136 ChimerSeq FusionScan TCGA_RNA-Seq LUC7L2-SERF2 LUC7L2 chr7 139090533 + SERF2 chr15 44085907 + Exonic hg19 ESCA TCGA-R6-A6XQ 2 Out-of-Frame Inter-chr q34 q15.3 3137 ChimerSeq FusionScan TCGA_RNA-Seq ZNFX1-DDB1 ZNFX1 chr20 47879870 - DDB1 chr11 61081958 - Exonic hg19 ESCA TCGA-R6-A6XQ 2 In-Frame Inter-chr q13.13 q12.2 3138 ChimerSeq FusionScan TCGA_RNA-Seq CHMP3-UBC CHMP3 chr2 86790426 - UBC chr12 125398320 - Exonic hg19 ESCA TCGA-R6-A6XQ 2 5'UTR-5'UTR Inter-chr p11.2 q24.31 3139 ChimerSeq FusionScan TCGA_RNA-Seq VPS54-UGP2 VPS54 chr2 64124629 - UGP2 chr2 64112722 + Exonic hg19 ESCA TCGA-R6-A6XQ 2 In-Frame Intra-chr p14 p15 3140 ChimerSeq FusionScan TCGA_RNA-Seq SBF2-ANO3 SBF2 chr11 10215448 - ANO3 chr11 26664728 + Exonic hg19 ESCA TCGA-R6-A6XQ 2 Out-of-Frame Intra-chr p15.4 p14.2 3141 ChimerSeq FusionScan TCGA_RNA-Seq CSMD1-EIF3E CSMD1 chr8 4494863 - EIF3E chr8 109215732 - Exonic hg19 ESCA TCGA-IG-A3YA 2 In-Frame Intra-chr p23.2 Tumor suppressor gene q23.1 3142 ChimerSeq FusionScan TCGA_RNA-Seq EIF3A-PSME1 EIF3A chr10 120810032 - PSME1 chr14 24606529 + Exonic hg19 ESCA TCGA-IG-A3YA 2 Out-of-Frame Inter-chr q26.11 q12 3143 ChimerSeq FusionScan TCGA_RNA-Seq WDR89-GPHN WDR89 chr14 64108521 - GPHN chr14 67525365 + Exonic hg19 ESCA TCGA-IG-A3YA 2 5'UTR-CDS Intra-chr q23.2 q23.3 3144 ChimerSeq FusionScan TCGA_RNA-Seq USP9X-EFHA1 USP9X chrX 40945362 + EFHA1 chr13 22084240 - Exonic hg19 ESCA TCGA-IG-A3YA 2 5'UTR-CDS Inter-chr p11.4 Oncogene 3145 ChimerSeq FusionScan TCGA_RNA-Seq TPX2-ZMYND8 TPX2 chr20 30327424 + ZMYND8 chr20 45867882 - Exonic hg19 ESCA TCGA-IG-A3YA 2 5'UTR-CDS Intra-chr q11.21 q13.12 3146 ChimerSeq FusionScan TCGA_RNA-Seq SMURF2-PRKAR1A SMURF2 chr17 62557617 - PRKAR1A chr17 66511534 + Exonic hg19 ESCA TCGA-IG-A3YA 2 CDS-5'UTR Intra-chr q24.1 q24.2 Oncogene Tumor suppressor gene 3147 ChimerSeq FusionScan TCGA_RNA-Seq CASP9-FBXO42 CASP9 chr1 15844604 - FBXO42 chr1 16641930 - Exonic hg19 ESCA TCGA-IG-A3YA 2 CDS-5'UTR Intra-chr p36.21 p36.13 3148 ChimerSeq FusionScan TCGA_RNA-Seq DLC1-SKI DLC1 chr8 12990452 - SKI chr1 2234416 + Exonic hg19 ESCA TCGA-IG-A3YA 2 Out-of-Frame Inter-chr p22 Tumor suppressor gene p36.33 Transcription factor 3149 ChimerSeq FusionScan TCGA_RNA-Seq CPT1A-PPFIA1 CPT1A chr11 68552282 - PPFIA1 chr11 70194294 + Exonic hg19 ESCA TCGA-L5-A43H 8 In-Frame Intra-chr q13.3 q13.3 Seq+ 3150 ChimerSeq FusionScan TCGA_RNA-Seq TBL1X-SHROOM2 TBL1X chrX 9622362 + SHROOM2 chrX 9841691 + Exonic hg19 ESCA TCGA-L5-A43H 4 Out-of-Frame Intra-chr p22.31 p22.2 Seq+ 3151 ChimerSeq FusionScan TCGA_RNA-Seq COPB2-NMD3 COPB2 chr3 139108389 - NMD3 chr3 160955900 + Exonic hg19 ESCA TCGA-L5-A43H 2 Out-of-Frame Intra-chr q23 q26.1 3152 ChimerSeq FusionScan TCGA_RNA-Seq AFF1-DMTF1 AFF1 chr4 87869723 + DMTF1 chr7 86792810 + Exonic hg19 ESCA TCGA-L5-A43H 2 CDS-5'UTR Inter-chr q21.3 Oncogene q21.12 Tumor suppressor gene Transcription factor 3153 ChimerSeq FusionScan TCGA_RNA-Seq C19orf47-ALG3 C19orf47 chr19 40854230 - ALG3 chr3 183963600 - Exonic hg19 ESCA TCGA-L5-A43H 2 5'UTR-CDS Inter-chr q13.2 q27.1 3154 ChimerSeq FusionScan TCGA_RNA-Seq WNT7B-TBC1D17 WNT7B chr22 46326977 - TBC1D17 chr19 50390732 + Exonic hg19 ESCA TCGA-L5-A43H 2 Out-of-Frame Inter-chr q13.31 q13.33 3155 ChimerSeq FusionScan TCGA_RNA-Seq MTSS1-BPTF MTSS1 chr8 125711766 - BPTF chr17 65870932 + Exonic hg19 ESCA TCGA-L5-A43H 2 In-Frame Inter-chr q24.13 Tumor suppressor gene q24.2 Transcription factor 3156 ChimerSeq FusionScan TCGA_RNA-Seq GABRE-PRPF3 GABRE chrX 151128310 - PRPF3 chr1 150321632 + Exonic hg19 ESCA TCGA-L5-A43H 2 In-Frame Inter-chr q28 q21.2 3157 ChimerSeq FusionScan TCGA_RNA-Seq CARD14-EVL CARD14 chr17 78172390 + EVL chr14 100607516 + Exonic hg19 ESCA TCGA-L5-A43H 2 Out-of-Frame Inter-chr q25.3 q32.2 3158 ChimerSeq FusionScan TCGA_RNA-Seq KCTD3-C1orf9 KCTD3 chr1 215741111 + C1orf9 chr1 172525008 + Exonic hg19 ESCA TCGA-L5-A43H 2 Out-of-Frame Intra-chr q41 3159 ChimerSeq FusionScan TCGA_RNA-Seq BCL6-CDKN1A BCL6 chr3 187463197 - CDKN1A chr6 36651873 + Exonic hg19 ESCA TCGA-L5-A43H 2 5'UTR-5'UTR Inter-chr q27.3 Oncogene Transcription factor p21.2 Tumor suppressor gene 3160 ChimerSeq FusionScan TCGA_RNA-Seq SAT1-TOX4 SAT1 chrX 23802000 + TOX4 chr14 21956748 + Exonic hg19 ESCA TCGA-L5-A43H 2 Out-of-Frame Inter-chr p22.11 q11.2 3161 ChimerSeq FusionScan TCGA_RNA-Seq CUL2-CREM CUL2 chr10 35349801 - CREM chr10 35437295 + Exonic hg19 ESCA TCGA-L5-A43H 2 In-Frame Intra-chr p11.21 Tumor suppressor gene p11.21 Tumor suppressor gene Transcription factor 3162 ChimerSeq FusionScan TCGA_RNA-Seq GLI4-GALT GLI4 chr8 144351690 + GALT chr9 34649406 + Exonic hg19 ESCA TCGA-L5-A43H 2 In-Frame Inter-chr q24.3 Transcription factor p13.3 3163 ChimerSeq FusionScan TCGA_RNA-Seq KIF22-PRKCB KIF22 chr16 29802150 + PRKCB chr16 24043456 + Exonic hg19 ESCA TCGA-R6-A6XG 3 Out-of-Frame Intra-chr p11.2 p12.2 Tumor suppressor gene Seq+ 3164 ChimerSeq FusionScan TCGA_RNA-Seq DHX37-NCOR2 DHX37 chr12 125467056 - NCOR2 chr12 124922542 - Exonic hg19 ESCA TCGA-R6-A6XG 2 In-Frame Intra-chr q24.31 q24.31 3165 ChimerSeq FusionScan TCGA_RNA-Seq DYNC1LI2-NAE1 DYNC1LI2 chr16 66783099 - NAE1 chr16 66839929 - Exonic hg19 ESCA TCGA-VR-A8Q7 25 In-Frame Intra-chr q22.1 q22.1 Seq+ 3166 ChimerSeq FusionScan TCGA_RNA-Seq TYK2-TMEM205 TYK2 chr19 10490290 - TMEM205 chr19 11456304 - Exonic hg19 ESCA TCGA-VR-A8Q7 10 5'UTR-5'UTR Intra-chr p13.2 TK:JakA p13.2 Seq+ 3167 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57725762 + VMP1 chr17 57915655 + Exonic hg19 ESCA TCGA-VR-A8Q7 9 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 3168 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 ESCA TCGA-VR-A8Q7 4 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 3169 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1432-LARS KIAA1432 chr9 5757451 + LARS chr5 145515227 - Exonic hg19 ESCA TCGA-VR-A8Q7 3 In-Frame Inter-chr q32 Seq+ 3170 ChimerSeq FusionScan TCGA_RNA-Seq SEMA3F-RNF123 SEMA3F chr3 50197167 + RNF123 chr3 49742082 + Exonic hg19 ESCA TCGA-VR-A8Q7 3 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 3171 ChimerSeq FusionScan TCGA_RNA-Seq TLE3-YWHAH TLE3 chr15 70345565 - YWHAH chr22 32352125 + Exonic hg19 ESCA TCGA-VR-A8Q7 3 In-Frame Inter-chr q23 q12.3 Seq+ 3172 ChimerSeq FusionScan TCGA_RNA-Seq PLEK2-RDH11 PLEK2 chr14 67854940 - RDH11 chr14 68159769 - Exonic hg19 ESCA TCGA-VR-A8Q7 2 Out-of-Frame Intra-chr q24.1 q24.1 3173 ChimerSeq FusionScan TCGA_RNA-Seq LSP1-PSMG3 LSP1 chr11 1908544 + PSMG3 chr7 1608996 - Exonic hg19 ESCA TCGA-VR-A8Q7 2 CDS-5'UTR Inter-chr p15.5 p22.3 3174 ChimerSeq FusionScan TCGA_RNA-Seq TYK2-TMEM205 TYK2 chr19 10490290 - TMEM205 chr19 11453796 - Exonic hg19 ESCA TCGA-VR-A8Q7 2 5'UTR-CDS Intra-chr p13.2 TK:JakA p13.2 Seq+ 3175 ChimerSeq FusionScan TCGA_RNA-Seq MGLL-EEFSEC MGLL chr3 127500631 - EEFSEC chr3 127965678 + Exonic hg19 ESCA TCGA-VR-A8Q7 2 In-Frame Intra-chr q21.3 q21.3 Seq+ 3176 ChimerSeq FusionScan TCGA_RNA-Seq CTTN-SHANK2 CTTN chr11 70256066 + SHANK2 chr11 70349036 - Exonic hg19 ESCA TCGA-VR-AA4G 13 In-Frame Intra-chr q13.3 q13.4 Seq+ 3177 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2IP-SREK1 ERBB2IP chr5 65310553 + SREK1 chr5 65449290 + Exonic hg19 ESCA TCGA-VR-AA4G 2 In-Frame Intra-chr q12.3 Seq+ 3178 ChimerSeq FusionScan TCGA_RNA-Seq TSC22D1-ZNF415 TSC22D1 chr13 45147298 - ZNF415 chr19 53613161 - Exonic hg19 ESCA TCGA-VR-AA4G 2 Out-of-Frame Inter-chr q14.11 Tumor suppressor gene Transcription factor q13.42 Transcription factor 3179 ChimerSeq FusionScan TCGA_RNA-Seq TTC23-LRRC28 TTC23 chr15 99789621 - LRRC28 chr15 99926234 + Exonic hg19 ESCA TCGA-VR-AA4G 2 5'UTR-CDS Intra-chr q26.3 q26.3 3180 ChimerSeq FusionScan TCGA_RNA-Seq NCKAP1-TNFSF15 NCKAP1 chr2 183902719 - TNFSF15 chr9 117555848 - Exonic hg19 ESCA TCGA-VR-AA4G 2 In-Frame Inter-chr q32.1 q32 3181 ChimerSeq FusionScan TCGA_RNA-Seq PTPRS-AGTRAP PTPRS chr19 5219320 - AGTRAP chr1 11807496 + Exonic hg19 ESCA TCGA-VR-AA4G 2 In-Frame Inter-chr p13.3 p36.22 3182 ChimerSeq FusionScan TCGA_RNA-Seq RASSF8-ITPR2 RASSF8 chr12 26112081 + ITPR2 chr12 26648193 - Exonic hg19 ESCA TCGA-VR-AA4G 2 5'UTR-CDS Intra-chr p12.1 Tumor suppressor gene p11.23 3183 ChimerSeq FusionScan TCGA_RNA-Seq EXOC4-NAA50 EXOC4 chr7 133041327 + NAA50 chr3 113442942 - Exonic hg19 ESCA TCGA-VR-AA4G 2 In-Frame Inter-chr q33 q13.31 3184 ChimerSeq FusionScan TCGA_RNA-Seq TMX2-CTNND1 TMX2 chr11 57505140 + CTNND1 chr11 57558856 + Exonic hg19 ESCA TCGA-VR-AA4G 2 5'UTR-5'UTR Intra-chr q12.1 q12.1 Tumor suppressor gene 3185 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0753-RSBN1L KIAA0753 chr17 6493098 - RSBN1L chr7 77407654 + Exonic hg19 ESCA TCGA-VR-AA4G 2 In-Frame Inter-chr p13.1 q11.23 3186 ChimerSeq FusionScan TCGA_RNA-Seq BICD2-IPPK BICD2 chr9 95477534 - IPPK chr9 95420963 - Exonic hg19 ESCA TCGA-VR-AA4G 2 In-Frame Intra-chr q22.31 q22.31 3187 ChimerSeq FusionScan TCGA_RNA-Seq RPL27A-ST5 RPL27A chr11 8704363 + ST5 chr11 8747756 - Exonic hg19 ESCA TCGA-VR-AA4G 2 Out-of-Frame Intra-chr p15.4 p15.4 Tumor suppressor gene Seq+ 3188 ChimerSeq FusionScan TCGA_RNA-Seq ARID2-ANO6 ARID2 chr12 46215270 + ANO6 chr12 45822887 + Exonic hg19 ESCA TCGA-VR-AA4G 2 In-Frame Intra-chr q12 Oncogene Tumor suppressor gene Transcription factor q12 3189 ChimerSeq FusionScan TCGA_RNA-Seq OSBPL3-ANO1 OSBPL3 chr7 25019504 - ANO1 chr11 69978024 + Exonic hg19 ESCA TCGA-VR-A8EU 41 5'UTR-5'UTR Inter-chr p15.3 q13.3 Seq+ 3190 ChimerSeq FusionScan TCGA_RNA-Seq OSBPL3-ANO1 OSBPL3 chr7 25019504 - ANO1 chr11 69995815 + Exonic hg19 ESCA TCGA-VR-A8EU 5 5'UTR-5'UTR Inter-chr p15.3 q13.3 Seq+ 3191 ChimerSeq FusionScan TCGA_RNA-Seq KREMEN1-ZNRF3 KREMEN1 chr22 29517469 + ZNRF3 chr22 29449566 + Exonic hg19 ESCA TCGA-VR-A8EU 4 Out-of-Frame Intra-chr q12.1 q12.1 Seq+ 3192 ChimerSeq FusionScan TCGA_RNA-Seq NLRP1-C1QBP NLRP1 chr17 5485178 - C1QBP chr17 5338286 - Exonic hg19 ESCA TCGA-VR-A8EU 4 Out-of-Frame Intra-chr p13.2 Oncogene p13.2 Seq+ 3193 ChimerSeq FusionScan TCGA_RNA-Seq WNK1-ERC1 WNK1 chr12 922980 + ERC1 chr12 1289705 + Exonic hg19 ESCA TCGA-VR-A8EU 4 Out-of-Frame Intra-chr p13.33 Seq+ 3194 ChimerSeq FusionScan TCGA_RNA-Seq GTF2H2D-OCLN GTF2H2D chr5 68882183 + OCLN chr5 68840730 + Exonic hg19 ESCA TCGA-VR-A8EU 3 In-Frame Intra-chr q13.2 3195 ChimerSeq FusionScan TCGA_RNA-Seq COG5-LRGUK COG5 chr7 107167681 - LRGUK chr7 133883971 + Exonic hg19 ESCA TCGA-VR-A8EU 3 Out-of-Frame Intra-chr q33 3196 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1644-CYP19A1 KIAA1644 chr22 44681307 - CYP19A1 chr15 51535147 - Exonic hg19 ESCA TCGA-VR-A8EU 3 CDS-5'UTR Inter-chr q13.31 q21.2 3197 ChimerSeq FusionScan TCGA_RNA-Seq CCBP2-KRBOX1 CCBP2 chr3 42861203 + KRBOX1 chr3 42980341 + Exonic hg19 ESCA TCGA-VR-A8EU 2 5'UTR-5'UTR Intra-chr p22.1 Seq+ 3198 ChimerSeq FusionScan TCGA_RNA-Seq RSRC1-FAM190A RSRC1 chr3 158015864 + FAM190A chr4 92007100 + Exonic hg19 ESCA TCGA-VR-A8EU 2 In-Frame Inter-chr q25.32 Seq+ 3199 ChimerSeq FusionScan TCGA_RNA-Seq CD81-NOTCH1 CD81 chr11 2398845 + NOTCH1 chr9 139414017 - Exonic hg19 ESCA TCGA-VR-A8EU 2 Out-of-Frame Inter-chr p15.5 q34.3 Oncogene Tumor suppressor gene 3200 ChimerSeq FusionScan TCGA_RNA-Seq ADAM17-SEC31A ADAM17 chr2 9634765 - SEC31A chr4 83765662 - Exonic hg19 ESCA TCGA-VR-A8EU 2 In-Frame Inter-chr p25.1 q21.22 3201 ChimerSeq FusionScan TCGA_RNA-Seq TMEM48-PPT1 TMEM48 chr1 54258901 - PPT1 chr1 40544330 - Exonic hg19 ESCA TCGA-R6-A6DN 3 In-Frame Intra-chr p34.2 3202 ChimerSeq FusionScan TCGA_RNA-Seq AHI1-SGK1 AHI1 chr6 135679269 - SGK1 chr6 134528569 - Exonic hg19 ESCA TCGA-R6-A6DN 2 In-Frame Intra-chr q23.3 q23.2 AGC:SGK Oncogene 3203 ChimerSeq FusionScan TCGA_RNA-Seq RSU1-SRD5A1 RSU1 chr10 16737021 - SRD5A1 chr5 6668314 + Exonic hg19 ESCA TCGA-R6-A6DN 2 CDS-3'UTR Inter-chr p13 p15.31 3204 ChimerSeq FusionScan TCGA_RNA-Seq UBP1-TFCP2L1 UBP1 chr3 33453072 - TFCP2L1 chr2 122004546 - Exonic hg19 ESCA TCGA-R6-A6DN 2 In-Frame Inter-chr p22.3 Transcription factor q14.2 Transcription factor 3205 ChimerSeq FusionScan TCGA_RNA-Seq EHF-BDNF EHF chr11 34673352 + BDNF chr11 27680132 - Exonic hg19 ESCA TCGA-R6-A6DN 2 Out-of-Frame Intra-chr p13 Tumor suppressor gene Transcription factor p14.1 Seq+ 3206 ChimerSeq FusionScan TCGA_RNA-Seq RPS17L-RPL13A RPS17L chr15 83208731 - RPL13A chr19 49994035 + Exonic hg19 ESCA TCGA-LN-A9FP 2 Out-of-Frame Inter-chr q13.33 3207 ChimerSeq FusionScan TCGA_RNA-Seq FAM160B2-ADRA1A FAM160B2 chr8 21958483 + ADRA1A chr8 26628183 - Exonic hg19 ESCA TCGA-LN-A9FP 2 Out-of-Frame Intra-chr p21.3 p21.2 3208 ChimerSeq FusionScan TCGA_RNA-Seq MICA-RIPK1 MICA chr6 31368539 + RIPK1 chr6 3104458 + Exonic hg19 ESCA TCGA-LN-A9FP 2 3'UTR-CDS Intra-chr p21.33 p25.2 TKL:RIPK 3209 ChimerSeq FusionScan TCGA_RNA-Seq DECR1-STAU2 DECR1 chr8 91013789 + STAU2 chr8 74464554 - Exonic hg19 ESCA TCGA-2H-A9GG 21 Out-of-Frame Intra-chr q21.3 q21.11 Seq+ 3210 ChimerSeq FusionScan TCGA_RNA-Seq RUNX1T1-ZC2HC1A RUNX1T1 chr8 93115084 - ZC2HC1A chr8 79590797 + Exonic hg19 ESCA TCGA-2H-A9GG 9 Out-of-Frame Intra-chr q21.3 Oncogene q21.13 Seq+ 3211 ChimerSeq FusionScan TCGA_RNA-Seq NFIX-DOCK6 NFIX chr19 13136366 + DOCK6 chr19 11364402 - Exonic hg19 ESCA TCGA-2H-A9GG 7 Out-of-Frame Intra-chr p13.13 Transcription factor p13.2 Seq+ 3212 ChimerSeq FusionScan TCGA_RNA-Seq RUNX1T1-ZC2HC1A RUNX1T1 chr8 93088192 - ZC2HC1A chr8 79590797 + Exonic hg19 ESCA TCGA-2H-A9GG 6 Out-of-Frame Intra-chr q21.3 Oncogene q21.13 Seq+ 3213 ChimerSeq FusionScan TCGA_RNA-Seq RUNX1T1-ZC2HC1A RUNX1T1 chr8 93074773 - ZC2HC1A chr8 79590797 + Exonic hg19 ESCA TCGA-2H-A9GG 6 Out-of-Frame Intra-chr q21.3 Oncogene q21.13 Seq+ 3214 ChimerSeq FusionScan TCGA_RNA-Seq RUNX1T1-ZC2HC1A RUNX1T1 chr8 93107255 - ZC2HC1A chr8 79590797 + Exonic hg19 ESCA TCGA-2H-A9GG 5 Out-of-Frame Intra-chr q21.3 Oncogene q21.13 Seq+ 3215 ChimerSeq FusionScan TCGA_RNA-Seq POU2F1-MAEL POU2F1 chr1 167190195 + MAEL chr1 166973416 + Exonic hg19 ESCA TCGA-2H-A9GG 4 In-Frame Intra-chr q24.2 Transcription factor q24.1 Seq+ 3216 ChimerSeq FusionScan TCGA_RNA-Seq HOXA10-CSN1S1 HOXA10 chr7 27212967 - CSN1S1 chr4 70798261 + Exonic hg19 ESCA TCGA-2H-A9GG 4 CDS-5'UTR Inter-chr p15.2 Transcription factor q13.3 Seq+ 3217 ChimerSeq FusionScan TCGA_RNA-Seq TCEA1-MSRA TCEA1 chr8 54934622 - MSRA chr8 10065342 + Exonic hg19 ESCA TCGA-2H-A9GG 3 Out-of-Frame Intra-chr q11.23 p23.1 3218 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-TMEM67 PVT1 chr8 128806980 + TMEM67 chr8 94807636 + Exonic hg19 ESCA TCGA-2H-A9GG 3 5'UTR-5'UTR Intra-chr q24.21 q22.1 Seq+ 3219 ChimerSeq FusionScan TCGA_RNA-Seq RHOT2-RAB11FIP3 RHOT2 chr16 718699 + RAB11FIP3 chr16 521294 + Exonic hg19 ESCA TCGA-2H-A9GG 3 Out-of-Frame Intra-chr p13.3 Seq+ 3220 ChimerSeq FusionScan TCGA_RNA-Seq HOXB6-NPDC1 HOXB6 chr17 46681841 - NPDC1 chr9 139937525 - Exonic hg19 ESCA TCGA-2H-A9GG 2 5'UTR-CDS Inter-chr q21.32 Transcription factor q34.3 3221 ChimerSeq FusionScan TCGA_RNA-Seq SORT1-CINP SORT1 chr1 109878861 - CINP chr14 102816385 - Exonic hg19 ESCA TCGA-2H-A9GG 2 In-Frame Inter-chr p13.3 q32.31 3222 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-TNFRSF11B PVT1 chr8 128806980 + TNFRSF11B chr8 119945539 - Exonic hg19 ESCA TCGA-2H-A9GG 2 5'UTR-CDS Intra-chr q24.21 q24.12 Seq+ 3223 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-TMEM67 PVT1 chr8 128806980 + TMEM67 chr8 94808128 + Exonic hg19 ESCA TCGA-2H-A9GG 2 5'UTR-5'UTR Intra-chr q24.21 q22.1 Seq+ 3224 ChimerSeq FusionScan TCGA_RNA-Seq EEA1-LRRIQ1 EEA1 chr12 93322818 - LRRIQ1 chr12 85497781 + Exonic hg19 ESCA TCGA-JY-A6FE 11 Out-of-Frame Intra-chr q22 Transcription factor q21.31 Seq+ 3225 ChimerSeq FusionScan TCGA_RNA-Seq FTO-ZNF423 FTO chr16 53738141 + ZNF423 chr16 49559405 - Exonic hg19 ESCA TCGA-JY-A6FE 10 Out-of-Frame Intra-chr q12.2 q12.1 Transcription factor Seq+ 3226 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-COPZ2 RCC1 chr1 28834672 + COPZ2 chr17 46111310 - Exonic hg19 ESCA TCGA-JY-A6FE 2 5'UTR-CDS Inter-chr p35.3 q21.32 3227 ChimerSeq FusionScan TCGA_RNA-Seq NRG1-LRRC28 NRG1 chr8 32474403 + LRRC28 chr15 99926234 + Exonic hg19 ESCA TCGA-JY-A6FE 2 In-Frame Inter-chr p12 q26.3 3228 ChimerSeq FusionScan TCGA_RNA-Seq FN1-HNRPDL FN1 chr2 216238044 - HNRPDL chr4 83346036 - Exonic hg19 ESCA TCGA-JY-A6FE 2 CDS-3'UTR Inter-chr q35 Oncogene 3229 ChimerSeq FusionScan TCGA_RNA-Seq TTC7B-DNAJB6 TTC7B chr14 91282518 - DNAJB6 chr7 157202488 + Exonic hg19 ESCA TCGA-JY-A6FE 2 In-Frame Inter-chr q32.11 q36.3 3230 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D23-C3orf26 TBC1D23 chr3 99979915 + C3orf26 chr3 99879273 + Exonic hg19 ESCA TCGA-LN-A7HZ 11 Out-of-Frame Intra-chr q12.1 Seq+ 3231 ChimerSeq FusionScan TCGA_RNA-Seq CDH13-HSBP1 CDH13 chr16 83159106 + HSBP1 chr16 83842284 + Exonic hg19 ESCA TCGA-LN-A7HZ 2 In-Frame Intra-chr q23.3 Tumor suppressor gene q23.3 Seq+ 3232 ChimerSeq FusionScan TCGA_RNA-Seq CORO2A-PSMB7 CORO2A chr9 100954840 - PSMB7 chr9 127146935 - Exonic hg19 ESCA TCGA-LN-A7HZ 2 5'UTR-CDS Intra-chr q22.33 q33.3 3233 ChimerSeq FusionScan TCGA_RNA-Seq C19orf70-DECR2 C19orf70 chr19 5679355 - DECR2 chr16 454955 + Exonic hg19 ESCA TCGA-LN-A7HZ 2 Out-of-Frame Inter-chr p13.3 3234 ChimerSeq FusionScan TCGA_RNA-Seq LETM1-MAEA LETM1 chr4 1857595 - MAEA chr4 1326544 + Exonic hg19 ESCA TCGA-LN-A7HZ 2 Out-of-Frame Intra-chr p16.3 p16.3 3235 ChimerSeq FusionScan TCGA_RNA-Seq CYP4F11-FAM95B1 CYP4F11 chr19 16038021 - FAM95B1 chr9 42470479 + Exonic hg19 ESCA TCGA-LN-A7HZ 2 CDS-5'UTR Inter-chr p13.12 p11.2 3236 ChimerSeq FusionScan TCGA_RNA-Seq MMD-HDAC5 MMD chr17 53499030 - HDAC5 chr17 42165966 - Exonic hg19 ESCA TCGA-V5-A7RE 14 Out-of-Frame Intra-chr q22 q21.31 Seq+ 3237 ChimerSeq FusionScan TCGA_RNA-Seq ALDOA-BCAR4 ALDOA chr16 30077248 + BCAR4 chr16 11914154 - Exonic hg19 ESCA TCGA-V5-A7RE 13 5'UTR-3'UTR Intra-chr p11.2 p13.13 Seq+ 3238 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-USP32 CLTC chr17 57697534 + USP32 chr17 58422969 - Exonic hg19 ESCA TCGA-V5-A7RE 12 Out-of-Frame Intra-chr q23.1 q23.2 Seq+ 3239 ChimerSeq FusionScan TCGA_RNA-Seq CDC27-CCT6B CDC27 chr17 45266511 - CCT6B chr17 33281618 - Exonic hg19 ESCA TCGA-V5-A7RE 6 In-Frame Intra-chr q21.32 q12 Seq+ 3240 ChimerSeq FusionScan TCGA_RNA-Seq ALDOA-BCAR4 ALDOA chr16 30075826 + BCAR4 chr16 11914154 - Exonic hg19 ESCA TCGA-V5-A7RE 5 5'UTR-3'UTR Intra-chr p11.2 p13.13 Seq+ 3241 ChimerSeq FusionScan TCGA_RNA-Seq SPAG9-TRIM37 SPAG9 chr17 49057106 - TRIM37 chr17 57168701 - Exonic hg19 ESCA TCGA-V5-A7RE 5 Out-of-Frame Intra-chr q21.33 q22 Seq+ 3242 ChimerSeq FusionScan TCGA_RNA-Seq SMARCD2-STRADA SMARCD2 chr17 61910946 - STRADA chr17 61784778 - Exonic hg19 ESCA TCGA-V5-A7RE 5 Out-of-Frame Intra-chr q23.3 q23.3 Tumor suppressor gene Seq+ 3243 ChimerSeq FusionScan TCGA_RNA-Seq ALDOA-BCAR4 ALDOA chr16 30077248 + BCAR4 chr16 11915612 - Exonic hg19 ESCA TCGA-V5-A7RE 4 5'UTR-3'UTR Intra-chr p11.2 p13.13 Seq+ 3244 ChimerSeq FusionScan TCGA_RNA-Seq STRADA-GRB2 STRADA chr17 61790765 - GRB2 chr17 73328878 - Exonic hg19 ESCA TCGA-V5-A7RE 3 In-Frame Intra-chr q23.3 Tumor suppressor gene q25.1 Seq+ 3245 ChimerSeq FusionScan TCGA_RNA-Seq CDC27-CCT6B CDC27 chr17 45266511 - CCT6B chr17 33285713 - Exonic hg19 ESCA TCGA-V5-A7RE 2 In-Frame Intra-chr q21.32 q12 Seq+ 3246 ChimerSeq FusionScan TCGA_RNA-Seq SPAG9-TRIM37 SPAG9 chr17 49059884 - TRIM37 chr17 57168701 - Exonic hg19 ESCA TCGA-V5-A7RE 2 In-Frame Intra-chr q21.33 q22 Seq+ 3247 ChimerSeq FusionScan TCGA_RNA-Seq SMARCD2-STRADA SMARCD2 chr17 61910946 - STRADA chr17 61784099 - Exonic hg19 ESCA TCGA-V5-A7RE 2 In-Frame Intra-chr q23.3 q23.3 Tumor suppressor gene Seq+ 3248 ChimerSeq FusionScan TCGA_RNA-Seq LLGL2-FAM222B LLGL2 chr17 73555491 + FAM222B chr17 27093725 - Exonic hg19 ESCA TCGA-V5-A7RE 2 CDS-5'UTR Intra-chr q25.1 q11.2 Seq+ 3249 ChimerSeq FusionScan TCGA_RNA-Seq TMEM108-SLC24A4 TMEM108 chr3 132948195 + SLC24A4 chr14 92900255 + Exonic hg19 ESCA TCGA-VR-A8EP 2 In-Frame Inter-chr q22.1 q32.12 3250 ChimerSeq FusionScan TCGA_RNA-Seq EEF1G-TUT1 EEF1G chr11 62334277 - TUT1 chr11 62346502 - Exonic hg19 ESCA TCGA-LN-A9FQ 15 Out-of-Frame Intra-chr q12.3 q12.3 Seq+ 3251 ChimerSeq FusionScan TCGA_RNA-Seq CYP4F11-FAM95B1 CYP4F11 chr19 16038021 - FAM95B1 chr9 42470479 + Exonic hg19 ESCA TCGA-LN-A9FQ 4 CDS-5'UTR Inter-chr p13.12 p11.2 3252 ChimerSeq FusionScan TCGA_RNA-Seq EXT1-LRFN5 EXT1 chr8 119122323 - LRFN5 chr14 42236056 + Exonic hg19 ESCA TCGA-LN-A9FQ 2 CDS-5'UTR Inter-chr q24.11 Oncogene Tumor suppressor gene q21.1 3253 ChimerSeq FusionScan TCGA_RNA-Seq ESRRA-SETX ESRRA chr11 64074976 + SETX chr9 135147195 - Exonic hg19 ESCA TCGA-LN-A9FQ 2 Out-of-Frame Inter-chr q13.1 Transcription factor q34.13 3254 ChimerSeq FusionScan TCGA_RNA-Seq UBP1-TFCP2L1 UBP1 chr3 33453072 - TFCP2L1 chr2 122004546 - Exonic hg19 ESCA TCGA-LN-A9FQ 2 In-Frame Inter-chr p22.3 Transcription factor q14.2 Transcription factor 3255 ChimerSeq FusionScan TCGA_RNA-Seq SSH2-HP1BP3 SSH2 chr17 27982578 - HP1BP3 chr1 21100103 - Exonic hg19 ESCA TCGA-L5-A8NQ 2 In-Frame Inter-chr q11.2 p36.12 3256 ChimerSeq FusionScan TCGA_RNA-Seq AAK1-FNTA AAK1 chr2 69732700 - FNTA chr8 42919243 + Exonic hg19 ESCA TCGA-L5-A8NQ 2 In-Frame Inter-chr p13.3 Other:NAK p11.21 3257 ChimerSeq FusionScan TCGA_RNA-Seq GNAI3-CYB561D1 GNAI3 chr1 110129504 + CYB561D1 chr1 110037764 + Exonic hg19 ESCA TCGA-2H-A9GN 12 In-Frame Intra-chr p13.3 p13.3 Seq+ 3258 ChimerSeq FusionScan TCGA_RNA-Seq LRFN1-DLL3 LRFN1 chr19 39804570 - DLL3 chr19 39993454 + Exonic hg19 ESCA TCGA-2H-A9GN 4 Out-of-Frame Intra-chr q13.2 q13.2 Seq+ 3259 ChimerSeq FusionScan TCGA_RNA-Seq DGAT1-TONSL DGAT1 chr8 145544983 - TONSL chr8 145662482 - Exonic hg19 ESCA TCGA-2H-A9GN 4 In-Frame Intra-chr q24.3 q24.3 Seq+ 3260 ChimerSeq FusionScan TCGA_RNA-Seq SMARCA4-DNM2 SMARCA4 chr19 11071850 + DNM2 chr19 10916591 + Exonic hg19 ESCA TCGA-2H-A9GN 4 5'UTR-CDS Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 3261 ChimerSeq FusionScan TCGA_RNA-Seq LTA4H-CDK17 LTA4H chr12 96400091 - CDK17 chr12 96694138 - Exonic hg19 ESCA TCGA-2H-A9GN 3 In-Frame Intra-chr q23.1 q23.1 Seq+ 3262 ChimerSeq FusionScan TCGA_RNA-Seq DMPK-SLPI DMPK chr19 46278206 - SLPI chr20 43882374 - Exonic hg19 ESCA TCGA-2H-A9GN 2 Out-of-Frame Inter-chr q13.32 q13.12 Seq+ 3263 ChimerSeq FusionScan TCGA_RNA-Seq IFT80-SMC4 IFT80 chr3 160093599 - SMC4 chr3 160141212 + Exonic hg19 ESCA TCGA-2H-A9GN 2 Out-of-Frame Intra-chr q25.33 q25.33 3264 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-NEGR1 RCC1 chr1 28834672 + NEGR1 chr1 72400994 - Exonic hg19 ESCA TCGA-2H-A9GN 2 5'UTR-CDS Intra-chr p35.3 p31.1 3265 ChimerSeq FusionScan TCGA_RNA-Seq SERGEF-SPTY2D1 SERGEF chr11 18010143 - SPTY2D1 chr11 18638536 - Exonic hg19 ESCA TCGA-2H-A9GN 2 Out-of-Frame Intra-chr p15.1 p15.1 3266 ChimerSeq FusionScan TCGA_RNA-Seq NR1D1-DMKN NR1D1 chr17 38253317 - DMKN chr19 35990931 - Exonic hg19 ESCA TCGA-2H-A9GN 2 Out-of-Frame Inter-chr q21.1 Transcription factor q13.12 3267 ChimerSeq FusionScan TCGA_RNA-Seq STEAP3-ZNFX1 STEAP3 chr2 119981464 + ZNFX1 chr20 47892424 - Exonic hg19 ESCA TCGA-2H-A9GN 2 5'UTR-5'UTR Inter-chr q14.2 q13.13 3268 ChimerSeq FusionScan TCGA_RNA-Seq PPOX-CDK5RAP3 PPOX chr1 161137024 + CDK5RAP3 chr17 46048727 + Exonic hg19 ESCA TCGA-2H-A9GN 2 In-Frame Inter-chr q23.3 q21.32 3269 ChimerSeq FusionScan TCGA_RNA-Seq TFDP2-XRN1 TFDP2 chr3 141868024 - XRN1 chr3 142145683 - Exonic hg19 ESCA TCGA-2H-A9GN 2 5'UTR-CDS Intra-chr q23 Transcription factor q23 Seq+ 3270 ChimerSeq FusionScan TCGA_RNA-Seq LPCAT4-SPRED1 LPCAT4 chr15 34654396 - SPRED1 chr15 38591573 + Exonic hg19 ESCA TCGA-2H-A9GN 2 In-Frame Intra-chr q14 q14 Seq+ 3271 ChimerSeq FusionScan TCGA_RNA-Seq TIMM17B-PQBP1 TIMM17B chrX 48755349 - PQBP1 chrX 48755212 + Exonic hg19 ESCA TCGA-IG-A97I 2 5'UTR-5'UTR Intra-chr p11.23 p11.23 Seq+ 3272 ChimerSeq FusionScan TCGA_RNA-Seq EXOC6-CYP26A1 EXOC6 chr10 94708136 + CYP26A1 chr10 94834064 + Exonic hg19 ESCA TCGA-IG-A97I 2 In-Frame Intra-chr q23.33 q23.33 3273 ChimerSeq FusionScan TCGA_RNA-Seq VEZF1-KRT222 VEZF1 chr17 56065439 - KRT222 chr17 38816459 - Exonic hg19 ESCA TCGA-JY-A6FB 16 In-Frame Intra-chr q22 Transcription factor q21.2 Seq+ 3274 ChimerSeq FusionScan TCGA_RNA-Seq CD2AP-FAM69A CD2AP chr6 47445984 + FAM69A chr1 93341987 - Exonic hg19 ESCA TCGA-JY-A6FB 13 Out-of-Frame Inter-chr p12.3 p22.1 Seq+ 3275 ChimerSeq FusionScan TCGA_RNA-Seq FOXP4-UBR2 FOXP4 chr6 41555635 + UBR2 chr6 42573458 + Exonic hg19 ESCA TCGA-JY-A6FB 5 In-Frame Intra-chr p21.1 Oncogene Transcription factor p21.1 Seq+ 3276 ChimerSeq FusionScan TCGA_RNA-Seq CD2AP-USP49 CD2AP chr6 47548636 + USP49 chr6 41774749 - Exonic hg19 ESCA TCGA-JY-A6FB 4 CDS-5'UTR Intra-chr p12.3 p21.1 Seq+ 3277 ChimerSeq FusionScan TCGA_RNA-Seq CD2AP-USP49 CD2AP chr6 47547225 + USP49 chr6 41774749 - Exonic hg19 ESCA TCGA-JY-A6FB 3 CDS-5'UTR Intra-chr p12.3 p21.1 Seq+ 3278 ChimerSeq FusionScan TCGA_RNA-Seq SLC29A2-PCBP2 SLC29A2 chr11 66133406 - PCBP2 chr12 53854798 + Exonic hg19 ESCA TCGA-JY-A6FB 2 In-Frame Inter-chr q13.2 q13.13 3279 ChimerSeq FusionScan TCGA_RNA-Seq JUP-C17orf80 JUP chr17 39927898 - C17orf80 chr17 71239034 + Exonic hg19 ESCA TCGA-JY-A6FB 2 In-Frame Intra-chr q21.2 Tumor suppressor gene q25.1 3280 ChimerSeq FusionScan TCGA_RNA-Seq GYS1-FTL GYS1 chr19 49494558 - FTL chr19 49469537 + Exonic hg19 ESCA TCGA-JY-A6FB 2 In-Frame Intra-chr q13.33 q13.33 3281 ChimerSeq FusionScan TCGA_RNA-Seq C19orf25-TJP3 C19orf25 chr19 1478772 - TJP3 chr19 3750135 + Exonic hg19 ESCA TCGA-JY-A6FB 2 Out-of-Frame Intra-chr p13.3 p13.3 3282 ChimerSeq FusionScan TCGA_RNA-Seq RAB3IP-CNOT2 RAB3IP chr12 70178595 + CNOT2 chr12 70713077 + Exonic hg19 ESCA TCGA-JY-A6FB 2 In-Frame Intra-chr q15 q15 Seq+ 3283 ChimerSeq FusionScan TCGA_RNA-Seq ADAP1-C7orf50 ADAP1 chr7 959604 - C7orf50 chr7 1040187 - Exonic hg19 ESCA TCGA-JY-A6FB 2 Out-of-Frame Intra-chr p22.3 p22.3 3284 ChimerSeq FusionScan TCGA_RNA-Seq LYZ-CCT2 LYZ chr12 69746078 + CCT2 chr12 69983264 + Exonic hg19 ESCA TCGA-JY-A6FB 2 In-Frame Intra-chr q15 q15 Seq+ 3285 ChimerSeq FusionScan TCGA_RNA-Seq WAC-STX11 WAC chr10 28824686 + STX11 chr6 144507759 + Exonic hg19 ESCA TCGA-LN-A49N 2 5'UTR-5'UTR Inter-chr p12.1 q24.2 3286 ChimerSeq FusionScan TCGA_RNA-Seq EPN2-FARSA EPN2 chr17 19232200 + FARSA chr19 13035817 - Exonic hg19 ESCA TCGA-LN-A49N 2 Out-of-Frame Inter-chr p11.2 p13.13 3287 ChimerSeq FusionScan TCGA_RNA-Seq BICD2-IPPK BICD2 chr9 95477534 - IPPK chr9 95420963 - Exonic hg19 ESCA TCGA-LN-A49N 2 In-Frame Intra-chr q22.31 q22.31 3288 ChimerSeq FusionScan TCGA_RNA-Seq ZNF655-ABCA13 ZNF655 chr7 99159596 + ABCA13 chr7 48682883 + Exonic hg19 ESCA TCGA-LN-A49N 2 Out-of-Frame Intra-chr q22.1 Transcription factor p12.3 3289 ChimerSeq FusionScan TCGA_RNA-Seq TMSB4Y-KAL1 TMSB4Y chrY 15816315 + KAL1 chrX 8667786 - Exonic hg19 ESCA TCGA-LN-A49N 2 Out-of-Frame Inter-chr q11.221 3290 ChimerSeq FusionScan TCGA_RNA-Seq BMP7-CD99 BMP7 chr20 55840760 - CD99 chrY 2587701 + Exonic hg19 ESCA TCGA-LN-A4A4 2 In-Frame Inter-chr q13.31 p22.33 3291 ChimerSeq FusionScan TCGA_RNA-Seq USP4-CDH1 USP4 chr3 49362134 - CDH1 chr16 68853182 + Exonic hg19 ESCA TCGA-LN-A4A4 2 In-Frame Inter-chr p21.31 q22.1 Oncogene Tumor suppressor gene 3292 ChimerSeq FusionScan TCGA_RNA-Seq MDN1-MYOF MDN1 chr6 90381918 - MYOF chr10 95111603 - Exonic hg19 ESCA TCGA-LN-A4A4 2 Out-of-Frame Inter-chr q15 q23.33 3293 ChimerSeq FusionScan TCGA_RNA-Seq FCHSD2-ANO1 FCHSD2 chr11 72851075 - ANO1 chr11 70026109 + Exonic hg19 ESCA TCGA-LN-A4A4 2 Out-of-Frame Intra-chr q13.4 q13.3 3294 ChimerSeq FusionScan TCGA_RNA-Seq MMP17-NOC4L MMP17 chr12 132313198 + NOC4L chr12 132635525 + Exonic hg19 ESCA TCGA-LN-A4A4 2 Out-of-Frame Intra-chr q24.33 q24.33 Seq+ 3295 ChimerSeq FusionScan TCGA_RNA-Seq TCTN1-GORASP2 TCTN1 chr12 111066723 + GORASP2 chr2 171806048 + Exonic hg19 ESCA TCGA-LN-A4A4 2 In-Frame Inter-chr q24.11 q31.1 3296 ChimerSeq FusionScan TCGA_RNA-Seq MOB1B-CORIN MOB1B chr4 71768267 + CORIN chr4 47809064 - Exonic hg19 ESCA TCGA-LN-A4A4 2 Out-of-Frame Intra-chr q13.3 Tumor suppressor gene p12 3297 ChimerSeq FusionScan TCGA_RNA-Seq UBP1-TFCP2L1 UBP1 chr3 33453072 - TFCP2L1 chr2 122004546 - Exonic hg19 ESCA TCGA-LN-A4A4 2 In-Frame Inter-chr p22.3 Transcription factor q14.2 Transcription factor 3298 ChimerSeq FusionScan TCGA_RNA-Seq DENND4A-PERP DENND4A chr15 65993388 - PERP chr6 138417631 - Exonic hg19 ESCA TCGA-LN-A4A4 2 In-Frame Inter-chr q22.31 q23.3 3299 ChimerSeq FusionScan TCGA_RNA-Seq MKL2-CLEC16A MKL2 chr16 14173211 + CLEC16A chr16 11114049 + Exonic hg19 ESCA TCGA-LN-A4A4 2 5'UTR-CDS Intra-chr p13.12 p13.13 Seq+ 3300 ChimerSeq FusionScan TCGA_RNA-Seq DCUN1D2-PTK2 DCUN1D2 chr13 114144981 - PTK2 chr8 141900868 - Exonic hg19 ESCA TCGA-LN-A4A4 2 Out-of-Frame Inter-chr q34 q24.3 3301 ChimerSeq FusionScan TCGA_RNA-Seq CYP4F11-FAM95B1 CYP4F11 chr19 16038021 - FAM95B1 chr9 42470479 + Exonic hg19 ESCA TCGA-V5-A7RC 5 CDS-5'UTR Inter-chr p13.12 p11.2 3302 ChimerSeq FusionScan TCGA_RNA-Seq GCLC-FAM204A GCLC chr6 53409293 - FAM204A chr10 120085755 - Exonic hg19 ESCA TCGA-V5-A7RC 2 In-Frame Inter-chr p12.1 q26.11 3303 ChimerSeq FusionScan TCGA_RNA-Seq PIP4K2A-KIAA1217 PIP4K2A chr10 23003111 - KIAA1217 chr10 24784075 + Exonic hg19 ESCA TCGA-V5-A7RC 2 Out-of-Frame Intra-chr p12.2 p12.2 3304 ChimerSeq FusionScan TCGA_RNA-Seq PDXK-KLF10 PDXK chr21 45154004 + KLF10 chr8 103664625 - Exonic hg19 ESCA TCGA-L5-A4OX 6 Out-of-Frame Inter-chr q22.3 q22.3 Tumor suppressor gene Transcription factor Seq+ 3305 ChimerSeq FusionScan TCGA_RNA-Seq STAT5B-NSRP1 STAT5B chr17 40428265 - NSRP1 chr17 28499559 + Exonic hg19 ESCA TCGA-L5-A4OX 5 5'UTR-CDS Intra-chr q21.2 Transcription factor q11.2 Seq+ 3306 ChimerSeq FusionScan TCGA_RNA-Seq DYRK1A-DENND3 DYRK1A chr21 38739930 + DENND3 chr8 142185298 + Exonic hg19 ESCA TCGA-L5-A4OX 3 5'UTR-CDS Inter-chr q22.13 CMGC:DYRK q24.3 Seq+ 3307 ChimerSeq FusionScan TCGA_RNA-Seq NRP2-KLF7 NRP2 chr2 206631542 + KLF7 chr2 207953305 - Exonic hg19 ESCA TCGA-L5-A8NT 5 In-Frame Intra-chr q33.3 q33.3 Transcription factor Seq+ 3308 ChimerSeq FusionScan TCGA_RNA-Seq LRBA-PHF20L1 LRBA chr4 151231380 - PHF20L1 chr8 133806655 + Exonic hg19 ESCA TCGA-L5-A8NT 2 Out-of-Frame Inter-chr q31.3 q24.22 3309 ChimerSeq FusionScan TCGA_RNA-Seq ZNF787-TTC3 ZNF787 chr19 56614507 - TTC3 chr21 38480691 + Exonic hg19 ESCA TCGA-L5-A8NT 2 Out-of-Frame Inter-chr q13.43 Transcription factor q22.13 3310 ChimerSeq FusionScan TCGA_RNA-Seq PTPRK-SERINC1 PTPRK chr6 128841403 - SERINC1 chr6 122779826 - Exonic hg19 ESCA TCGA-L5-A8NT 2 Out-of-Frame Intra-chr Tumor suppressor gene q22.31 3311 ChimerSeq FusionScan TCGA_RNA-Seq DENND1B-PRRC2C DENND1B chr1 197741997 - PRRC2C chr1 171481170 + Exonic hg19 ESCA TCGA-L5-A8NT 2 CDS-5'UTR Intra-chr q31.3 q24.3 3312 ChimerSeq FusionScan TCGA_RNA-Seq MAP2-UNC80 MAP2 chr2 210289000 + UNC80 chr2 210843252 + Exonic hg19 ESCA TCGA-L5-A8NT 2 5'UTR-CDS Intra-chr q34 q34 3313 ChimerSeq FusionScan TCGA_RNA-Seq TEFM-SMARCD2 TEFM chr17 29231083 - SMARCD2 chr17 61912927 - Exonic hg19 ESCA TCGA-L5-A8NT 2 In-Frame Intra-chr q11.2 q23.3 3314 ChimerSeq FusionScan TCGA_RNA-Seq EFCAB4B-KCNA6 EFCAB4B chr12 3822402 - KCNA6 chr12 4959903 + Exonic hg19 ESCA TCGA-L5-A8NT 2 5'UTR-3'UTR Intra-chr 3315 ChimerSeq FusionScan TCGA_RNA-Seq BARD1-C6orf222 BARD1 chr2 215645283 - C6orf222 chr6 36291967 - Exonic hg19 ESCA TCGA-L5-A8NT 2 Out-of-Frame Inter-chr q35 Tumor suppressor gene p21.31 Seq+ 3316 ChimerSeq FusionScan TCGA_RNA-Seq CHD1-ST8SIA4 CHD1 chr5 98262037 - ST8SIA4 chr5 100192100 - Exonic hg19 ESCA TCGA-L5-A8NT 2 In-Frame Intra-chr q21.1 Tumor suppressor gene q21.1 Seq+ 3317 ChimerSeq FusionScan TCGA_RNA-Seq TLK1-C14orf101 TLK1 chr2 172016799 - C14orf101 chr14 57051718 + Exonic hg19 ESCA TCGA-L5-A8NT 2 In-Frame Inter-chr q31.1 Other:TLK 3318 ChimerSeq FusionScan TCGA_RNA-Seq MPPE1-PTPN18 MPPE1 chr18 11906201 - PTPN18 chr2 131126705 + Exonic hg19 ESCA TCGA-L5-A8NT 2 5'UTR-CDS Inter-chr p11.21 q21.1 3319 ChimerSeq FusionScan TCGA_RNA-Seq SEP15-IL4R 2019_ 9_ 15_ chr1 87368963 - IL4R chr16 27356189 + Exonic hg19 ESCA TCGA-L5-A8NT 2 Out-of-Frame Inter-chr p12.1 3320 ChimerSeq FusionScan TCGA_RNA-Seq DAB2IP-DOCK8 DAB2IP chr9 124329507 + DOCK8 chr9 286460 + Exonic hg19 ESCA TCGA-L5-A8NT 2 Out-of-Frame Intra-chr q33.2 Tumor suppressor gene p24.3 3321 ChimerSeq FusionScan TCGA_RNA-Seq TGIF1-IMPA2 TGIF1 chr18 3450503 + IMPA2 chr18 11999052 + Exonic hg19 ESCA TCGA-L5-A8NT 2 Out-of-Frame Intra-chr p11.31 Transcription factor p11.21 3322 ChimerSeq FusionScan TCGA_RNA-Seq STK24-PCCA STK24 chr13 99171496 - PCCA chr13 100959445 + Exonic hg19 ESCA TCGA-L5-A8NT 2 In-Frame Intra-chr q32.2 q32.3 3323 ChimerSeq FusionScan TCGA_RNA-Seq IFRD2-RBM5 IFRD2 chr3 50329647 - RBM5 chr3 50150815 + Exonic hg19 ESCA TCGA-L5-A8NT 2 Out-of-Frame Intra-chr p21.31 p21.31 Tumor suppressor gene 3324 ChimerSeq FusionScan TCGA_RNA-Seq CASK-SEPN1 CASK chrX 41712367 - SEPN1 chr1 26127533 + Exonic hg19 ESCA TCGA-L7-A56G 2 Out-of-Frame Inter-chr p11.4 CAMK:CASK 3325 ChimerSeq FusionScan TCGA_RNA-Seq PLCB2-EPN1 PLCB2 chr15 40584049 - EPN1 chr19 56206513 + Exonic hg19 ESCA TCGA-L7-A56G 2 In-Frame Inter-chr q15.1 q13.42 3326 ChimerSeq FusionScan TCGA_RNA-Seq PAPSS1-GAB1 PAPSS1 chr4 108565957 - GAB1 chr4 144336629 + Exonic hg19 ESCA TCGA-L7-A56G 2 In-Frame Intra-chr q25 q31.21 3327 ChimerSeq FusionScan TCGA_RNA-Seq CHRM3-FMN2 CHRM3 chr1 239990678 + FMN2 chr1 240286478 + Exonic hg19 ESCA TCGA-IG-A5S3 2 5'UTR-CDS Intra-chr q43 q43 Seq+ 3328 ChimerSeq FusionScan TCGA_RNA-Seq HNRPDL-GSTA4 HNRPDL chr4 83347189 - GSTA4 chr6 52849403 - Exonic hg19 ESCA TCGA-IG-A5S3 2 3'UTR-CDS Inter-chr p12.2 3329 ChimerSeq FusionScan TCGA_RNA-Seq NUP62-ATF5 NUP62 chr19 50432582 - ATF5 chr19 50435678 + Exonic hg19 ESCA TCGA-IG-A5S3 2 5'UTR-CDS Intra-chr q13.33 q13.33 Transcription factor Seq+ 3330 ChimerSeq FusionScan TCGA_RNA-Seq CDKN2A-MIR31HG CDKN2A chr9 21994137 - MIR31HG chr9 21477291 - Exonic hg19 ESCA TCGA-IG-A5S3 2 CDS-3'UTR Intra-chr p21.3 Oncogene Tumor suppressor gene p21.3 3331 ChimerSeq FusionScan TCGA_RNA-Seq ZC3H3-EEF1D ZC3H3 chr8 144623545 - EEF1D chr8 144663324 - Exonic hg19 ESCA TCGA-IG-A4QS 2 In-Frame Intra-chr 3332 ChimerSeq FusionScan TCGA_RNA-Seq CCAR1-NCAPD2 CCAR1 chr10 70517134 + NCAPD2 chr12 6623430 + Exonic hg19 ESCA TCGA-IG-A4QS 2 Out-of-Frame Inter-chr q21.3 Tumor suppressor gene p13.31 3333 ChimerSeq FusionScan TCGA_RNA-Seq PRKCZ-IFLTD1 PRKCZ chr1 1991030 + IFLTD1 chr12 25702480 - Exonic hg19 ESCA TCGA-IG-A4QS 2 Out-of-Frame Inter-chr p36.33 Tumor suppressor gene Seq+ 3334 ChimerSeq FusionScan TCGA_RNA-Seq PRKCZ-IFLTD1 PRKCZ chr1 1991030 + IFLTD1 chr12 25679889 - Exonic hg19 ESCA TCGA-IG-A4QS 2 Out-of-Frame Inter-chr p36.33 Tumor suppressor gene Seq+ 3335 ChimerSeq FusionScan TCGA_RNA-Seq PARP8-CCDC91 PARP8 chr5 49963959 + CCDC91 chr12 28603093 + Exonic hg19 ESCA TCGA-IG-A4QS 2 Out-of-Frame Inter-chr q11.1 p11.22 3336 ChimerSeq FusionScan TCGA_RNA-Seq PPP5C-AP2S1 PPP5C chr19 46857246 + AP2S1 chr19 47349399 - Exonic hg19 ESCA TCGA-L5-A43J 12 In-Frame Intra-chr q13.32 q13.32 Seq+ 3337 ChimerSeq FusionScan TCGA_RNA-Seq SPATS2-ARPC2 SPATS2 chr12 49854820 + ARPC2 chr2 219082185 + Exonic hg19 ESCA TCGA-L5-A43J 2 CDS-5'UTR Inter-chr q13.12 q35 3338 ChimerSeq FusionScan TCGA_RNA-Seq CNOT1-STK38L CNOT1 chr16 58594115 - STK38L chr12 27461271 + Exonic hg19 ESCA TCGA-L5-A43J 2 In-Frame Inter-chr q21 p11.23 3339 ChimerSeq FusionScan TCGA_RNA-Seq CCDC82-P4HA2 CCDC82 chr11 96123007 - P4HA2 chr5 131554337 - Exonic hg19 ESCA TCGA-L5-A43J 2 5'UTR-5'UTR Inter-chr q21 q31.1 3340 ChimerSeq FusionScan TCGA_RNA-Seq PIN1-PDE4C PIN1 chr19 9949324 + PDE4C chr19 18344210 - Exonic hg19 ESCA TCGA-L5-A43J 2 5'UTR-5'UTR Intra-chr p13.2 Tumor suppressor gene Transcription factor p13.11 Seq+ 3341 ChimerSeq FusionScan TCGA_RNA-Seq IMPAD1-TCF12 IMPAD1 chr8 57890608 - TCF12 chr15 57355947 + Exonic hg19 ESCA TCGA-L5-A43J 2 In-Frame Inter-chr q12.1 q21.3 Oncogene Transcription factor 3342 ChimerSeq FusionScan TCGA_RNA-Seq NUP155-MARCH6 NUP155 chr5 37364348 - 2019_ 3_ 6_ chr5 10402495 + Exonic hg19 ESCA TCGA-L5-A43E 2 Out-of-Frame Intra-chr p13.2 p15.2 3343 ChimerSeq FusionScan TCGA_RNA-Seq YY1AP1-CCDC53 YY1AP1 chr1 155638417 - CCDC53 chr12 102406970 - Exonic hg19 ESCA TCGA-L5-A43E 2 Out-of-Frame Inter-chr q22 3344 ChimerSeq FusionScan TCGA_RNA-Seq RBM33-TMEM120A RBM33 chr7 155437613 + TMEM120A chr7 75618542 - Exonic hg19 ESCA TCGA-L5-A8NG 30 Out-of-Frame Intra-chr q36.3 q11.23 Seq+ 3345 ChimerSeq FusionScan TCGA_RNA-Seq ECSIT-RGL3 ECSIT chr19 11623870 - RGL3 chr19 11508273 - Exonic hg19 ESCA TCGA-L5-A8NG 9 In-Frame Intra-chr p13.2 p13.2 Seq+ 3346 ChimerSeq FusionScan TCGA_RNA-Seq MED24-NR1D1 MED24 chr17 38178207 - NR1D1 chr17 38253656 - Exonic hg19 ESCA TCGA-L5-A8NG 9 In-Frame Intra-chr q21.1 q21.1 Transcription factor Seq+ 3347 ChimerSeq FusionScan TCGA_RNA-Seq FBL-ZNF829 FBL chr19 40327195 - ZNF829 chr19 37406153 - Exonic hg19 ESCA TCGA-L5-A8NG 3 In-Frame Intra-chr q13.12 Transcription factor Seq+ 3348 ChimerSeq FusionScan TCGA_RNA-Seq PLD1-ATP1B3 PLD1 chr3 171528188 - ATP1B3 chr3 141622461 + Exonic hg19 ESCA TCGA-L5-A8NG 2 5'UTR-CDS Intra-chr q26.31 Tumor suppressor gene q23 3349 ChimerSeq FusionScan TCGA_RNA-Seq FOPNL-ABCC1 FOPNL chr16 15982414 - ABCC1 chr16 16196483 + Exonic hg19 ESCA TCGA-L5-A8NG 2 In-Frame Intra-chr p13.11 3350 ChimerSeq FusionScan TCGA_RNA-Seq MBTD1-THRA MBTD1 chr17 49336503 - THRA chr17 38240087 + Exonic hg19 ESCA TCGA-L5-A8NG 2 5'UTR-CDS Intra-chr q21.33 q21.1 Tumor suppressor gene Transcription factor Seq+ 3351 ChimerSeq FusionScan TCGA_RNA-Seq PKD1-RNF126 PKD1 chr16 2147148 - RNF126 chr19 650296 - Exonic hg19 ESCA TCGA-L5-A8NG 2 In-Frame Inter-chr p13.3 CAMK:PKD Tumor suppressor gene p13.3 3352 ChimerSeq FusionScan TCGA_RNA-Seq C11orf65-EPHX1 C11orf65 chr11 108338197 - EPHX1 chr1 226026354 + Exonic hg19 ESCA TCGA-L5-A8NG 2 5'UTR-CDS Inter-chr q22.3 q42.12 3353 ChimerSeq FusionScan TCGA_RNA-Seq HRSP12-LINC00511 HRSP12 chr8 99120873 - LINC00511 chr17 70595283 - Exonic hg19 ESCA TCGA-L5-A4OG 8 CDS-3'UTR Inter-chr q24.3 Seq+ 3354 ChimerSeq FusionScan TCGA_RNA-Seq EIF3J-SORD EIF3J chr15 44829625 + SORD chr15 45332605 + Exonic hg19 ESCA TCGA-L5-A4OG 3 In-Frame Intra-chr q21.1 q21.1 3355 ChimerSeq FusionScan TCGA_RNA-Seq FPGS-SQSTM1 FPGS chr9 130566979 + SQSTM1 chr5 179263435 + Exonic hg19 ESCA TCGA-L5-A4OG 2 Out-of-Frame Inter-chr q34.11 q35.3 3356 ChimerSeq FusionScan TCGA_RNA-Seq GART-SERPINB6 GART chr21 34914370 - SERPINB6 chr6 2959576 - Exonic hg19 ESCA TCGA-L5-A4OG 2 5'UTR-5'UTR Inter-chr p25.2 3357 ChimerSeq FusionScan TCGA_RNA-Seq ONECUT3-SKIL ONECUT3 chr19 1754853 + SKIL chr3 170077486 + Exonic hg19 ESCA TCGA-L5-A4OG 2 CDS-5'UTR Inter-chr p13.3 Transcription factor q26.2 Tumor suppressor gene Transcription factor 3358 ChimerSeq FusionScan TCGA_RNA-Seq WARS-MARS WARS chr14 100842596 - MARS chr12 57909702 + Exonic hg19 ESCA TCGA-L5-A4OG 2 5'UTR-CDS Inter-chr q32.2 q13.3 3359 ChimerSeq FusionScan TCGA_RNA-Seq AP2B1-GAS2L2 AP2B1 chr17 33984810 + GAS2L2 chr17 34077337 - Exonic hg19 ESCA TCGA-R6-A8W8 3 Out-of-Frame Intra-chr q12 q12 Seq+ 3360 ChimerSeq FusionScan TCGA_RNA-Seq NFE2L3-CBX3 NFE2L3 chr7 26192688 + CBX3 chr7 26245987 + Exonic hg19 ESCA TCGA-R6-A8W8 2 In-Frame Intra-chr p15.2 Transcription factor p15.2 3361 ChimerSeq FusionScan TCGA_RNA-Seq BRD9-STARD3 BRD9 chr5 876215 - STARD3 chr17 37813260 + Exonic hg19 ESCA TCGA-R6-A8W5 25 In-Frame Inter-chr p15.33 q12 Seq+ 3362 ChimerSeq FusionScan TCGA_RNA-Seq AGRN-ZC3H18 AGRN chr1 980903 + ZC3H18 chr16 88664585 + Exonic hg19 ESCA TCGA-R6-A8W5 16 In-Frame Inter-chr p36.33 q24.2 Seq+ 3363 ChimerSeq FusionScan TCGA_RNA-Seq OSBP-GIF OSBP chr11 59361076 - GIF chr11 59597018 - Exonic hg19 ESCA TCGA-R6-A8W5 8 In-Frame Intra-chr q12.1 q12.1 Seq+ 3364 ChimerSeq FusionScan TCGA_RNA-Seq XPO5-VARS XPO5 chr6 43492844 - VARS chr6 31747591 - Exonic hg19 ESCA TCGA-R6-A8W5 6 CDS-5'UTR Intra-chr p21.1 Tumor suppressor gene Seq+ 3365 ChimerSeq FusionScan TCGA_RNA-Seq KIF13B-C20orf194 KIF13B chr8 29013242 - C20orf194 chr20 3262412 - Exonic hg19 ESCA TCGA-R6-A8W5 6 In-Frame Inter-chr p12 p13 Seq+ 3366 ChimerSeq FusionScan TCGA_RNA-Seq WDR59-KARS WDR59 chr16 74982416 - KARS chr16 75670445 - Exonic hg19 ESCA TCGA-R6-A8W5 6 In-Frame Intra-chr q23.1 q23.1 Seq+ 3367 ChimerSeq FusionScan TCGA_RNA-Seq PHF2-WNK2 PHF2 chr9 96339153 + WNK2 chr9 96000514 + Exonic hg19 ESCA TCGA-R6-A8W5 5 Out-of-Frame Intra-chr q22.31 q22.31 Tumor suppressor gene Seq+ 3368 ChimerSeq FusionScan TCGA_RNA-Seq RAPGEF5-TOMM7 RAPGEF5 chr7 22270464 - TOMM7 chr7 22857667 - Exonic hg19 ESCA TCGA-R6-A8W5 5 Out-of-Frame Intra-chr p15.3 p15.3 Seq+ 3369 ChimerSeq FusionScan TCGA_RNA-Seq STIM1-PGAP2 STIM1 chr11 3877639 + PGAP2 chr11 3829523 + Exonic hg19 ESCA TCGA-R6-A8W5 4 In-Frame Intra-chr p15.4 p15.4 Seq+ 3370 ChimerSeq FusionScan TCGA_RNA-Seq EIF2C2-TRAPPC9 EIF2C2 chr8 141582910 - TRAPPC9 chr8 141381279 - Exonic hg19 ESCA TCGA-R6-A8W5 4 In-Frame Intra-chr q24.3 3371 ChimerSeq FusionScan TCGA_RNA-Seq ETV4-LSM12 ETV4 chr17 41610041 - LSM12 chr17 42141302 - Exonic hg19 ESCA TCGA-R6-A8W5 4 In-Frame Intra-chr q21.31 Oncogene Transcription factor q21.31 Seq+ 3372 ChimerSeq FusionScan TCGA_RNA-Seq BRD9-TERT BRD9 chr5 889701 - TERT chr5 1282739 - Exonic hg19 ESCA TCGA-R6-A8W5 3 In-Frame Intra-chr p15.33 p15.33 Oncogene Seq+ 3373 ChimerSeq FusionScan TCGA_RNA-Seq BRD9-TERT BRD9 chr5 891269 - TERT chr5 1282739 - Exonic hg19 ESCA TCGA-R6-A8W5 3 In-Frame Intra-chr p15.33 p15.33 Oncogene Seq+ 3374 ChimerSeq FusionScan TCGA_RNA-Seq KDM6A-FANCD2 KDM6A chrX 44733233 + FANCD2 chr3 10105475 + Exonic hg19 ESCA TCGA-R6-A8W5 3 In-Frame Inter-chr p11.3 Oncogene Tumor suppressor gene p25.3 Oncogene 3375 ChimerSeq FusionScan TCGA_RNA-Seq SNAPIN-FMNL1 SNAPIN chr1 153632042 + FMNL1 chr17 43317842 + Exonic hg19 ESCA TCGA-R6-A8W5 3 In-Frame Inter-chr q21.3 q21.31 Seq+ 3376 ChimerSeq FusionScan TCGA_RNA-Seq SPOP-TSPEAR SPOP chr17 47755294 - TSPEAR chr21 45953806 - Exonic hg19 ESCA TCGA-R6-A8W5 3 5'UTR-CDS Inter-chr q21.33 Oncogene Tumor suppressor gene q22.3 Seq+ 3377 ChimerSeq FusionScan TCGA_RNA-Seq EPN3-AGPAT3 EPN3 chr17 48616676 + AGPAT3 chr21 45379514 + Exonic hg19 ESCA TCGA-R6-A8W5 2 CDS-5'UTR Inter-chr q21.33 q22.3 Seq+ 3378 ChimerSeq FusionScan TCGA_RNA-Seq ATAD5-NF1 ATAD5 chr17 29159431 + NF1 chr17 29483000 + Exonic hg19 ESCA TCGA-R6-A8W5 2 In-Frame Intra-chr q11.2 q11.2 Oncogene Tumor suppressor gene Seq+ 3379 ChimerSeq FusionScan TCGA_RNA-Seq RGNEF-BTF3 RGNEF chr5 72980709 + BTF3 chr5 72798312 + Exonic hg19 ESCA TCGA-R6-A8W5 2 In-Frame Intra-chr q13.2 3380 ChimerSeq FusionScan TCGA_RNA-Seq CDH3-PQLC2 CDH3 chr16 68679653 + PQLC2 chr1 19653024 + Exonic hg19 ESCA TCGA-R6-A8W5 2 Out-of-Frame Inter-chr q22.1 p36.13 3381 ChimerSeq FusionScan TCGA_RNA-Seq BRD9-CDK12 BRD9 chr5 876215 - CDK12 chr17 37646809 + Exonic hg19 ESCA TCGA-R6-A8W5 2 Out-of-Frame Inter-chr p15.33 q12 Oncogene 3382 ChimerSeq FusionScan TCGA_RNA-Seq RCOR1-ISCA2 RCOR1 chr14 103059662 + ISCA2 chr14 74960752 + Exonic hg19 ESCA TCGA-R6-A8W5 2 Out-of-Frame Intra-chr q32.31 q24.3 Seq+ 3383 ChimerSeq FusionScan TCGA_RNA-Seq SLC7A5-TMEM219 SLC7A5 chr16 87872319 - TMEM219 chr16 29974430 + Exonic hg19 ESCA TCGA-R6-A8W5 2 CDS-5'UTR Intra-chr q24.2 p11.2 3384 ChimerSeq FusionScan TCGA_RNA-Seq AGRN-ZC3H18 AGRN chr1 970704 + ZC3H18 chr16 88664585 + Exonic hg19 ESCA TCGA-R6-A8W5 2 In-Frame Inter-chr p36.33 q24.2 Seq+ 3385 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD28-COLQ ANKRD28 chr3 15900883 - COLQ chr3 15531144 - Exonic hg19 ESCA TCGA-R6-A8W5 2 Out-of-Frame Intra-chr p25.1 p25.1 Seq+ 3386 ChimerSeq FusionScan TCGA_RNA-Seq SNHG1-PQLC2 SNHG1 chr11 62622604 - PQLC2 chr1 19653024 + Exonic hg19 ESCA TCGA-R6-A8W5 2 3'UTR-CDS Inter-chr q12.3 p36.13 3387 ChimerSeq FusionScan TCGA_RNA-Seq DVL3-RFX6 DVL3 chr3 183873584 + RFX6 chr6 117252493 + Exonic hg19 ESCA TCGA-R6-A8W5 2 Out-of-Frame Inter-chr q27.1 q22.1 Transcription factor Seq+ 3388 ChimerSeq FusionScan TCGA_RNA-Seq PSME4-ACYP2 PSME4 chr2 54197679 - ACYP2 chr2 54531824 + Exonic hg19 ESCA TCGA-R6-A8W5 2 In-Frame Intra-chr p16.2 p16.2 Seq+ 3389 ChimerSeq FusionScan TCGA_RNA-Seq NCK1-IL20RB NCK1 chr3 136647069 + IL20RB chr3 136708282 + Exonic hg19 ESCA TCGA-R6-A8W5 2 In-Frame Intra-chr q22.3 q22.3 Seq+ 3390 ChimerSeq FusionScan TCGA_RNA-Seq NOM1-RNF32 NOM1 chr7 156746992 + RNF32 chr7 156468389 + Exonic hg19 ESCA TCGA-L5-A4OS 22 In-Frame Intra-chr q36.3 q36.3 Seq+ 3391 ChimerSeq FusionScan TCGA_RNA-Seq JUP-KLHL11 JUP chr17 39919234 - KLHL11 chr17 40011573 - Exonic hg19 ESCA TCGA-L5-A4OS 16 Out-of-Frame Intra-chr q21.2 Tumor suppressor gene q21.2 Seq+ 3392 ChimerSeq FusionScan TCGA_RNA-Seq NELF-ZMYND19 NELF chr9 140346816 - ZMYND19 chr9 140477138 - Exonic hg19 ESCA TCGA-L5-A4OS 15 In-Frame Intra-chr q34.3 Seq+ 3393 ChimerSeq FusionScan TCGA_RNA-Seq SMURF1-CFLAR SMURF1 chr7 98741348 - CFLAR chr2 201994451 + Exonic hg19 ESCA TCGA-L5-A4OS 14 CDS-5'UTR Inter-chr q33.1 Seq+ 3394 ChimerSeq FusionScan TCGA_RNA-Seq ACLY-WEE1 ACLY chr17 40030063 - WEE1 chr11 9609995 + Exonic hg19 ESCA TCGA-L5-A4OS 13 In-Frame Inter-chr q21.2 p15.4 Seq+ 3395 ChimerSeq FusionScan TCGA_RNA-Seq GNB1-KIAA1751 GNB1 chr1 1822258 - KIAA1751 chr1 1897965 - Exonic hg19 ESCA TCGA-L5-A4OS 12 5'UTR-CDS Intra-chr p36.33 3396 ChimerSeq FusionScan TCGA_RNA-Seq STAT2-ANKRD52 STAT2 chr12 56753841 - ANKRD52 chr12 56642654 - Exonic hg19 ESCA TCGA-L5-A4OS 12 5'UTR-CDS Intra-chr q13.3 Transcription factor q13.3 Seq+ 3397 ChimerSeq FusionScan TCGA_RNA-Seq CBL-TRAPPC4 CBL chr11 119158656 + TRAPPC4 chr11 118894030 + Exonic hg19 ESCA TCGA-L5-A4OS 10 In-Frame Intra-chr q23.3 Oncogene Tumor suppressor gene Seq+ 3398 ChimerSeq FusionScan TCGA_RNA-Seq DLG1-BDH1 DLG1 chr3 197009549 - BDH1 chr3 197249652 - Exonic hg19 ESCA TCGA-L5-A4OS 9 In-Frame Intra-chr q29 Tumor suppressor gene Seq+ 3399 ChimerSeq FusionScan TCGA_RNA-Seq UBN1-MGRN1 UBN1 chr16 4918904 + MGRN1 chr16 4723498 + Exonic hg19 ESCA TCGA-L5-A4OS 6 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 3400 ChimerSeq FusionScan TCGA_RNA-Seq ACOT7-PLEKHG5 ACOT7 chr1 6341161 - PLEKHG5 chr1 6556629 - Exonic hg19 ESCA TCGA-L5-A4OS 6 Out-of-Frame Intra-chr p36.31 p36.31 Oncogene Seq+ 3401 ChimerSeq FusionScan TCGA_RNA-Seq CRAMP1L-IFT140 CRAMP1L chr16 1664986 + IFT140 chr16 1621535 - Exonic hg19 ESCA TCGA-L5-A4OS 6 Out-of-Frame Intra-chr p13.3 Seq+ 3402 ChimerSeq FusionScan TCGA_RNA-Seq FAM200A-CYP3A5 FAM200A chr7 99149476 - CYP3A5 chr7 99264688 - Exonic hg19 ESCA TCGA-L5-A4OS 5 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 3403 ChimerSeq FusionScan TCGA_RNA-Seq GRB2-PADI1 GRB2 chr17 73317739 - PADI1 chr1 17570504 + Exonic hg19 ESCA TCGA-L5-A4OS 5 In-Frame Inter-chr q25.1 Seq+ 3404 ChimerSeq FusionScan TCGA_RNA-Seq PHF21A-LEUTX PHF21A chr11 46142485 - LEUTX chr19 40275166 + Exonic hg19 ESCA TCGA-L5-A4OS 4 5'UTR-5'UTR Inter-chr p11.2 Transcription factor Transcription factor Seq+ 3405 ChimerSeq FusionScan TCGA_RNA-Seq ANKFY1-CCDC88C ANKFY1 chr17 4145550 - CCDC88C chr14 91757428 - Exonic hg19 ESCA TCGA-L5-A4OS 4 In-Frame Inter-chr p13.2 q32.12 Seq+ 3406 ChimerSeq FusionScan TCGA_RNA-Seq CACNA1D-GNL3 CACNA1D chr3 53804579 + GNL3 chr3 52724607 + Exonic hg19 ESCA TCGA-L5-A4OS 4 Out-of-Frame Intra-chr p21.1 p21.1 Seq+ 3407 ChimerSeq FusionScan TCGA_RNA-Seq ACTL8-ACOX1 ACTL8 chr1 18081999 + ACOX1 chr17 73974774 - Exonic hg19 ESCA TCGA-L5-A4OS 4 5'UTR-5'UTR Inter-chr p36.13 q25.1 Seq+ 3408 ChimerSeq FusionScan TCGA_RNA-Seq C14orf159-CDC42BPB C14orf159 chr14 91636545 + CDC42BPB chr14 103452917 - Exonic hg19 ESCA TCGA-L5-A4OS 3 Out-of-Frame Intra-chr q32.11 q32.32 3409 ChimerSeq FusionScan TCGA_RNA-Seq CACNA1D-GNL3 CACNA1D chr3 53804579 + GNL3 chr3 52724960 + Exonic hg19 ESCA TCGA-L5-A4OS 3 In-Frame Intra-chr p21.1 p21.1 Seq+ 3410 ChimerSeq FusionScan TCGA_RNA-Seq COL27A1-ZNF618 COL27A1 chr9 116999995 + ZNF618 chr9 116750600 + Exonic hg19 ESCA TCGA-L5-A4OS 3 Out-of-Frame Intra-chr q32 q32 Transcription factor Seq+ 3411 ChimerSeq FusionScan TCGA_RNA-Seq EIF3L-TRIOBP EIF3L chr22 38274178 + TRIOBP chr22 38106433 + Exonic hg19 ESCA TCGA-L5-A4OS 3 In-Frame Intra-chr q13.1 q13.1 Seq+ 3412 ChimerSeq FusionScan TCGA_RNA-Seq MAP3K5-IFNGR1 MAP3K5 chr6 137041587 - IFNGR1 chr6 137524822 - Exonic hg19 ESCA TCGA-L5-A4OS 2 In-Frame Intra-chr q23.3 STE:STE11 q23.3 Seq+ 3413 ChimerSeq FusionScan TCGA_RNA-Seq THADA-MYL12A THADA chr2 43547584 - MYL12A chr18 3253230 + Exonic hg19 ESCA TCGA-L5-A4OS 2 CDS-5'UTR Inter-chr p21 p11.31 3414 ChimerSeq FusionScan TCGA_RNA-Seq FKBP5-CLPS FKBP5 chr6 35604790 - CLPS chr6 35763054 - Exonic hg19 ESCA TCGA-L5-A4OS 2 Out-of-Frame Intra-chr p21.31 p21.31 3415 ChimerSeq FusionScan TCGA_RNA-Seq NCK1-IL20RB NCK1 chr3 136665137 + IL20RB chr3 136728954 + Exonic hg19 ESCA TCGA-L5-A4OS 2 In-Frame Intra-chr q22.3 q22.3 Seq+ 3416 ChimerSeq FusionScan TCGA_RNA-Seq PSMG3-R3HDM4 PSMG3 chr7 1608759 - R3HDM4 chr19 897540 - Exonic hg19 ESCA TCGA-L5-A4OS 2 Out-of-Frame Inter-chr p22.3 p13.3 3417 ChimerSeq FusionScan TCGA_RNA-Seq EWSR1-KREMEN1 EWSR1 chr22 29668420 + KREMEN1 chr22 29517344 + Exonic hg19 ESCA TCGA-L5-A4OS 2 Out-of-Frame Intra-chr q12.2 q12.1 Seq+ 3418 ChimerSeq FusionScan TCGA_RNA-Seq TRUB2-MAPKAP1 TRUB2 chr9 131083877 - MAPKAP1 chr9 128348006 - Exonic hg19 ESCA TCGA-L5-A4OS 2 Out-of-Frame Intra-chr q34.11 q33.3 3419 ChimerSeq FusionScan TCGA_RNA-Seq KIF26A-KLC1 KIF26A chr14 104618798 + KLC1 chr14 104120900 + Exonic hg19 ESCA TCGA-L5-A4OS 2 CDS-5'UTR Intra-chr q32.33 q32.33 3420 ChimerSeq FusionScan TCGA_RNA-Seq ADRBK1-MYO18A ADRBK1 chr11 67034283 + MYO18A chr17 27409456 - Exonic hg19 ESCA TCGA-L5-A4OS 2 In-Frame Inter-chr q11.2 Oncogene 3421 ChimerSeq FusionScan TCGA_RNA-Seq NBR1-ZNF680 NBR1 chr17 41322628 + ZNF680 chr7 63982878 - Exonic hg19 ESCA TCGA-L5-A4OS 2 5'UTR-CDS Inter-chr q21.31 q11.21 Transcription factor 3422 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175394270 - Exonic hg19 ESCA TCGA-L5-A4OS 2 5'UTR-CDS Inter-chr q21.1 q35.2 3423 ChimerSeq FusionScan TCGA_RNA-Seq CDH3-C16orf70 CDH3 chr16 68679653 + C16orf70 chr16 67154014 + Exonic hg19 ESCA TCGA-L5-A4OS 2 In-Frame Intra-chr q22.1 q22.1 Seq+ 3424 ChimerSeq FusionScan TCGA_RNA-Seq MAFF-RCOR1 MAFF chr22 38598219 + RCOR1 chr14 103148231 + Exonic hg19 ESCA TCGA-L5-A4OS 2 5'UTR-CDS Inter-chr q13.1 Transcription factor q32.31 Seq+ 3425 ChimerSeq FusionScan TCGA_RNA-Seq C20orf132-AFAP1L1 C20orf132 chr20 35737001 - AFAP1L1 chr5 148719569 + Exonic hg19 ESCA TCGA-L5-A4OS 2 Out-of-Frame Inter-chr q32 3426 ChimerSeq FusionScan TCGA_RNA-Seq DDB2-ATG13 DDB2 chr11 47238600 + ATG13 chr11 46680941 + Exonic hg19 ESCA TCGA-L5-A4OS 2 Out-of-Frame Intra-chr p11.2 Oncogene Tumor suppressor gene p11.2 3427 ChimerSeq FusionScan TCGA_RNA-Seq UBP1-TFCP2L1 UBP1 chr3 33453072 - TFCP2L1 chr2 122004546 - Exonic hg19 ESCA TCGA-L5-A4OS 2 In-Frame Inter-chr p22.3 Transcription factor q14.2 Transcription factor 3428 ChimerSeq FusionScan TCGA_RNA-Seq TSEN54-KIAA0195 TSEN54 chr17 73519860 + KIAA0195 chr17 73485656 + Exonic hg19 ESCA TCGA-L5-A4OS 2 Out-of-Frame Intra-chr q25.1 Seq+ 3429 ChimerSeq FusionScan TCGA_RNA-Seq ZNF43-PLAGL1 ZNF43 chr19 22034706 - PLAGL1 chr6 144290115 - Exonic hg19 ESCA TCGA-L5-A4OS 2 5'UTR-5'UTR Inter-chr p12 Transcription factor q24.2 Tumor suppressor gene Transcription factor 3430 ChimerSeq FusionScan TCGA_RNA-Seq TSPAN14-CTBP2 TSPAN14 chr10 82249070 + CTBP2 chr10 126799662 - Exonic hg19 ESCA TCGA-R6-A6XQ 2 CDS-5'UTR Intra-chr q23.1 q26.13 3431 ChimerSeq FusionScan TCGA_RNA-Seq VPS54-UGP2 VPS54 chr2 64124629 - UGP2 chr2 64112722 + Exonic hg19 ESCA TCGA-R6-A6XQ 2 In-Frame Intra-chr p14 p15 3432 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D8-TUT1 TBC1D8 chr2 101706715 - TUT1 chr11 62356693 - Exonic hg19 ESCA TCGA-R6-A6XQ 2 In-Frame Inter-chr q11.2 q12.3 3433 ChimerSeq FusionScan TCGA_RNA-Seq ZNFX1-DDB1 ZNFX1 chr20 47879870 - DDB1 chr11 61081958 - Exonic hg19 ESCA TCGA-R6-A6XQ 2 In-Frame Inter-chr q13.13 q12.2 3434 ChimerSeq FusionScan TCGA_RNA-Seq CHMP3-UBC CHMP3 chr2 86790426 - UBC chr12 125398320 - Exonic hg19 ESCA TCGA-R6-A6XQ 2 5'UTR-5'UTR Inter-chr p11.2 q24.31 3435 ChimerSeq FusionScan TCGA_RNA-Seq SBF2-ANO3 SBF2 chr11 10215448 - ANO3 chr11 26664728 + Exonic hg19 ESCA TCGA-R6-A6XQ 2 Out-of-Frame Intra-chr p15.4 p14.2 3436 ChimerSeq FusionScan TCGA_RNA-Seq FNDC3B-TNIK FNDC3B chr3 171851336 + TNIK chr3 171065007 - Exonic hg19 ESCA TCGA-L5-A88S 8 CDS-3'UTR Intra-chr q26.31 q26.31 STE:STE20 Seq+ 3437 ChimerSeq FusionScan TCGA_RNA-Seq FNDC3B-TNIK FNDC3B chr3 171851336 + TNIK chr3 170946010 - Exonic hg19 ESCA TCGA-L5-A88S 2 Out-of-Frame Intra-chr q26.31 q26.31 STE:STE20 Seq+ 3438 ChimerSeq FusionScan TCGA_RNA-Seq PHC3-FNDC3B PHC3 chr3 169824619 - FNDC3B chr3 172114953 + Exonic hg19 ESCA TCGA-L5-A88S 2 Out-of-Frame Intra-chr q26.2 Tumor suppressor gene q26.31 Seq+ 3439 ChimerSeq FusionScan TCGA_RNA-Seq ZZZ3-FUBP1 ZZZ3 chr1 78107206 - FUBP1 chr1 78435699 - Exonic hg19 ESCA TCGA-L5-A88S 2 5'UTR-CDS Intra-chr p31.1 Transcription factor p31.1 Oncogene 3440 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57886156 + Exonic hg19 ESCA TCGA-LN-A8HZ 11 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 3441 ChimerSeq FusionScan TCGA_RNA-Seq WWP2-GSG1L WWP2 chr16 69833198 + GSG1L chr16 27856382 - Exonic hg19 ESCA TCGA-LN-A8HZ 11 In-Frame Intra-chr q22.1 p12.1 Seq+ 3442 ChimerSeq FusionScan TCGA_RNA-Seq CYP4F11-FAM95B1 CYP4F11 chr19 16038021 - FAM95B1 chr9 42470479 + Exonic hg19 ESCA TCGA-LN-A8HZ 3 CDS-5'UTR Inter-chr p13.12 p11.2 3443 ChimerSeq FusionScan TCGA_RNA-Seq STRA13-ASPSCR1 STRA13 chr17 79980701 - ASPSCR1 chr17 79974351 + Exonic hg19 ESCA TCGA-LN-A8HZ 2 In-Frame Intra-chr q25.3 3444 ChimerSeq FusionScan TCGA_RNA-Seq PRRC2B-NUP214 PRRC2B chr9 134330553 + NUP214 chr9 134090598 + Exonic hg19 ESCA TCGA-LN-A8HZ 2 Out-of-Frame Intra-chr q34.13 q34.13 Oncogene Seq+ 3445 ChimerSeq FusionScan TCGA_RNA-Seq CEP170-RAD51B CEP170 chr1 243349080 - RAD51B chr14 68758600 + Exonic hg19 ESCA TCGA-LN-A8HZ 2 In-Frame Inter-chr q24.1 3446 ChimerSeq FusionScan TCGA_RNA-Seq TAF11-ACOX1 TAF11 chr6 34848065 - ACOX1 chr17 73947045 - Exonic hg19 ESCA TCGA-LN-A8HZ 2 In-Frame Inter-chr p21.31 q25.1 3447 ChimerSeq FusionScan TCGA_RNA-Seq FXYD3-NAPRT1 FXYD3 chr19 35612149 + NAPRT1 chr8 144657070 - Exonic hg19 ESCA TCGA-LN-A8HZ 2 Out-of-Frame Inter-chr q13.12 3448 ChimerSeq FusionScan TCGA_RNA-Seq LYPLAL1-GPATCH2 LYPLAL1 chr1 219352588 + GPATCH2 chr1 217688231 - Exonic hg19 ESCA TCGA-LN-A8HZ 2 Out-of-Frame Intra-chr q41 q41 3449 ChimerSeq FusionScan TCGA_RNA-Seq PERP-NHSL1 PERP chr6 138428263 - NHSL1 chr6 138817508 - Exonic hg19 ESCA TCGA-LN-A8HZ 2 In-Frame Intra-chr q23.3 q24.1 3450 ChimerSeq FusionScan TCGA_RNA-Seq EPC1-AKR1E2 EPC1 chr10 32635690 - AKR1E2 chr10 4872866 + Exonic hg19 ESCA TCGA-IG-A8O2 15 In-Frame Intra-chr p11.22 p15.1 Seq+ 3451 ChimerSeq FusionScan TCGA_RNA-Seq BCL11A-PTPLA BCL11A chr2 60773105 - PTPLA chr10 17646046 - Exonic hg19 ESCA TCGA-IG-A8O2 13 Out-of-Frame Inter-chr p16.1 Oncogene Transcription factor Seq+ 3452 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 ESCA TCGA-IG-A8O2 11 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 3453 ChimerSeq FusionScan TCGA_RNA-Seq EML4-EPHA3 EML4 chr2 42528532 + EPHA3 chr3 89498374 + Exonic hg19 ESCA TCGA-IG-A8O2 8 In-Frame Inter-chr p21 Oncogene p11.1 Oncogene Tumor suppressor gene Seq+ 3454 ChimerSeq FusionScan TCGA_RNA-Seq PARD3-NRXN1 PARD3 chr10 34985245 - NRXN1 chr2 50318632 - Exonic hg19 ESCA TCGA-IG-A8O2 7 In-Frame Inter-chr p11.21 p16.3 Seq+ 3455 ChimerSeq FusionScan TCGA_RNA-Seq NUMA1-IQSEC3 NUMA1 chr11 71780887 - IQSEC3 chr12 208311 + Exonic hg19 ESCA TCGA-IG-A8O2 5 5'UTR-5'UTR Inter-chr q13.4 Oncogene Seq+ 3456 ChimerSeq FusionScan TCGA_RNA-Seq MPP7-ZEB1 MPP7 chr10 28491081 - ZEB1 chr10 31791275 + Exonic hg19 ESCA TCGA-IG-A8O2 5 Out-of-Frame Intra-chr p12.1 p11.22 Transcription factor Seq+ 3457 ChimerSeq FusionScan TCGA_RNA-Seq NCOA6-DEFB118 NCOA6 chr20 33342524 - DEFB118 chr20 29960659 + Exonic hg19 ESCA TCGA-IG-A8O2 3 In-Frame Intra-chr q11.22 q11.21 3458 ChimerSeq FusionScan TCGA_RNA-Seq CYP4F11-FAM95B1 CYP4F11 chr19 16038021 - FAM95B1 chr9 42470479 + Exonic hg19 ESCA TCGA-IG-A8O2 3 CDS-5'UTR Inter-chr p13.12 p11.2 3459 ChimerSeq FusionScan TCGA_RNA-Seq BAIAP2-ACTG1 BAIAP2 chr17 79009108 + ACTG1 chr17 79479386 - Exonic hg19 ESCA TCGA-IG-A8O2 2 CDS-5'UTR Intra-chr q25.3 q25.3 3460 ChimerSeq FusionScan TCGA_RNA-Seq PPP6R3-ANAPC4 PPP6R3 chr11 68228295 + ANAPC4 chr4 25404592 + Exonic hg19 ESCA TCGA-IG-A8O2 2 5'UTR-CDS Inter-chr q13.2 p15.2 3461 ChimerSeq FusionScan TCGA_RNA-Seq EIF2AK2-ABCC1 EIF2AK2 chr2 37384050 - ABCC1 chr16 16101672 + Exonic hg19 ESCA TCGA-IG-A8O2 2 5'UTR-CDS Inter-chr p22.2 3462 ChimerSeq FusionScan TCGA_RNA-Seq ZNF418-USP25 ZNF418 chr19 58441795 - USP25 chr21 17203719 + Exonic hg19 ESCA TCGA-IG-A8O2 2 Out-of-Frame Inter-chr q13.43 Transcription factor q21.1 Seq+ 3463 ChimerSeq FusionScan TCGA_RNA-Seq FBXO11-NET1 FBXO11 chr2 48065997 - NET1 chr10 5493792 + Exonic hg19 ESCA TCGA-IG-A8O2 2 Out-of-Frame Inter-chr p16.3 p15.1 3464 ChimerSeq FusionScan TCGA_RNA-Seq LRRC28-GNAS LRRC28 chr15 99828156 + GNAS chr20 57470666 + Exonic hg19 ESCA TCGA-IG-A8O2 2 In-Frame Inter-chr q26.3 q13.32 Oncogene 3465 ChimerSeq FusionScan TCGA_RNA-Seq MMP17-NOC4L MMP17 chr12 132313198 + NOC4L chr12 132635525 + Exonic hg19 ESCA TCGA-IG-A8O2 2 Out-of-Frame Intra-chr q24.33 q24.33 Seq+ 3466 ChimerSeq FusionScan TCGA_RNA-Seq WDR20-RCOR1 WDR20 chr14 102661457 + RCOR1 chr14 103188523 + Exonic hg19 ESCA TCGA-VR-AA7D 2 Out-of-Frame Intra-chr q32.31 q32.31 3467 ChimerSeq FusionScan TCGA_RNA-Seq MIER2-DAP3 MIER2 chr19 334399 - DAP3 chr1 155706736 + Exonic hg19 ESCA TCGA-VR-AA7D 2 In-Frame Inter-chr p13.3 q22 3468 ChimerSeq FusionScan TCGA_RNA-Seq FNDC3A-ITM2B FNDC3A chr13 49580425 + ITM2B chr13 48827943 + Exonic hg19 ESCA TCGA-VR-AA7D 2 In-Frame Intra-chr q14.2 q14.2 3469 ChimerSeq FusionScan TCGA_RNA-Seq LGALS8-COPG1 LGALS8 chr1 236705010 + COPG1 chr3 128993680 + Exonic hg19 ESCA TCGA-VR-AA7D 2 In-Frame Inter-chr q43 q21.3 3470 ChimerSeq FusionScan TCGA_RNA-Seq WDR20-RCOR1 WDR20 chr14 102661457 + RCOR1 chr14 103188523 + Exonic hg19 ESCA TCGA-VR-AA7D 2 Out-of-Frame Intra-chr q32.31 q32.31 3471 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC17-SERINC2 ZCCHC17 chr1 31821821 + SERINC2 chr1 31883231 + Exonic hg19 ESCA TCGA-VR-AA7D 2 In-Frame Intra-chr p35.2 p35.2 3472 ChimerSeq FusionScan TCGA_RNA-Seq FNDC3A-ITM2B FNDC3A chr13 49580425 + ITM2B chr13 48827943 + Exonic hg19 ESCA TCGA-VR-AA7D 2 In-Frame Intra-chr q14.2 q14.2 3473 ChimerSeq FusionScan TCGA_RNA-Seq MIER2-DAP3 MIER2 chr19 334399 - DAP3 chr1 155706736 + Exonic hg19 ESCA TCGA-VR-AA7D 2 In-Frame Inter-chr p13.3 q22 3474 ChimerSeq FusionScan TCGA_RNA-Seq NOP58-ACTL6A NOP58 chr2 203157626 + ACTL6A chr3 179291156 + Exonic hg19 ESCA TCGA-VR-AA7D 2 In-Frame Inter-chr q33.1 q26.33 3475 ChimerSeq FusionScan TCGA_RNA-Seq MYH9-PKM2 MYH9 chr22 36681910 - PKM2 chr15 72499618 - Exonic hg19 ESCA TCGA-VR-AA7D 2 In-Frame Inter-chr q12.3 Oncogene Tumor suppressor gene 3476 ChimerSeq FusionScan TCGA_RNA-Seq IGBP1-ROBO1 IGBP1 chrX 69353390 + ROBO1 chr3 78796050 - Exonic hg19 ESCA TCGA-R6-A6L4 2 5'UTR-CDS Inter-chr q13.1 p12.3 Tumor suppressor gene 3477 ChimerSeq FusionScan TCGA_RNA-Seq MBTPS1-TAF1C MBTPS1 chr16 84120962 - TAF1C chr16 84213950 - Exonic hg19 ESCA TCGA-JY-A6FA 15 In-Frame Intra-chr q24.1 q24.1 Seq+ 3478 ChimerSeq FusionScan TCGA_RNA-Seq TOP1-LPIN3 TOP1 chr20 39658095 + LPIN3 chr20 39974435 + Exonic hg19 ESCA TCGA-JY-A6FA 3 CDS-5'UTR Intra-chr q12 Oncogene q12 Seq+ 3479 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0664-NR1D1 KIAA0664 chr17 2599452 - NR1D1 chr17 38249535 - Exonic hg19 ESCA TCGA-JY-A6FA 2 Out-of-Frame Intra-chr q21.1 Transcription factor 3480 ChimerSeq FusionScan TCGA_RNA-Seq CDH13-WFDC1 CDH13 chr16 83520260 + WFDC1 chr16 84358024 + Exonic hg19 ESCA TCGA-JY-A6FA 2 Out-of-Frame Intra-chr q23.3 Tumor suppressor gene q24.1 Tumor suppressor gene Seq+ 3481 ChimerSeq FusionScan TCGA_RNA-Seq BMP2K-CNOT6L BMP2K chr4 79697875 + CNOT6L chr4 78697546 - Exonic hg19 ESCA TCGA-JY-A6FA 2 Out-of-Frame Intra-chr q21.21 q21.1 3482 ChimerSeq FusionScan TCGA_RNA-Seq EIF4B-RNPC3 EIF4B chr12 53416411 + RNPC3 chr1 104097655 + Exonic hg19 ESCA TCGA-R6-A6L6 2 CDS-3'UTR Inter-chr q13.13 p21.1 3483 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT3 NDUFA11 chr19 5903622 - FUT3 chr19 5844862 - Exonic hg19 ESCA TCGA-R6-A6L6 2 CDS-5'UTR Intra-chr p13.3 p13.3 3484 ChimerSeq FusionScan TCGA_RNA-Seq CLDN12-TTBK2 CLDN12 chr7 90034922 + TTBK2 chr15 43170882 - Exonic hg19 ESCA TCGA-R6-A6L6 2 5'UTR-5'UTR Inter-chr q21.13 q15.2 CK1:TTBK 3485 ChimerSeq FusionScan TCGA_RNA-Seq DIDO1-ADRM1 DIDO1 chr20 61557790 - ADRM1 chr20 60881252 + Exonic hg19 ESCA TCGA-R6-A6L6 2 5'UTR-CDS Intra-chr q13.33 Tumor suppressor gene q13.33 3486 ChimerSeq FusionScan TCGA_RNA-Seq REEP3-RTKN2 REEP3 chr10 65359043 + RTKN2 chr10 64005816 - Exonic hg19 ESCA TCGA-L5-A8NR 2 Out-of-Frame Intra-chr q21.3 q21.2 Seq+ 3487 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R12C-SERINC2 PPP1R12C chr19 55610151 - SERINC2 chr1 31905813 + Exonic hg19 ESCA TCGA-VR-AA7I 3 Out-of-Frame Inter-chr q13.42 p35.2 3488 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D2B-PKM2 TBC1D2B chr15 78369634 - PKM2 chr15 72511451 - Exonic hg19 ESCA TCGA-VR-AA7I 2 Out-of-Frame Intra-chr q25.1 3489 ChimerSeq FusionScan TCGA_RNA-Seq DIP2C-SLC7A5 DIP2C chr10 735433 - SLC7A5 chr16 87885455 - Exonic hg19 ESCA TCGA-VR-AA7I 2 In-Frame Inter-chr p15.3 q24.2 3490 ChimerSeq FusionScan TCGA_RNA-Seq NUBPL-FLJ31306 NUBPL chr14 32068585 + FLJ31306 chr14 58758425 - Exonic hg19 ESCA TCGA-VR-AA7I 2 CDS-3'UTR Intra-chr q12 3491 ChimerSeq FusionScan TCGA_RNA-Seq MKI67-DOCK1 MKI67 chr10 129923839 - DOCK1 chr10 129046271 + Exonic hg19 ESCA TCGA-VR-AA7I 2 Out-of-Frame Intra-chr q26.2 q26.2 3492 ChimerSeq FusionScan TCGA_RNA-Seq PTGR1-PTBP3 PTGR1 chr9 114355205 - PTBP3 chr9 115092754 - Exonic hg19 ESCA TCGA-IG-A625 2 In-Frame Intra-chr q31.3 q32 Seq+ 3493 ChimerSeq FusionScan TCGA_RNA-Seq MTAP-FLJ35282 MTAP chr9 21802780 + FLJ35282 chr9 22674441 + Exonic hg19 ESCA TCGA-IG-A625 2 CDS-5'UTR Intra-chr p21.3 Tumor suppressor gene Seq+ 3494 ChimerSeq FusionScan TCGA_RNA-Seq LRRFIP1-CAB39 LRRFIP1 chr2 238617273 + CAB39 chr2 231624673 + Exonic hg19 ESCA TCGA-IG-A625 2 CDS-5'UTR Intra-chr q37.3 q37.1 3495 ChimerSeq FusionScan TCGA_RNA-Seq NUP62-ATF5 NUP62 chr19 50432582 - ATF5 chr19 50435678 + Exonic hg19 ESCA TCGA-IG-A625 2 5'UTR-CDS Intra-chr q13.33 q13.33 Transcription factor Seq+ 3496 ChimerSeq FusionScan TCGA_RNA-Seq FUT11-KRT4 FUT11 chr10 75533573 + KRT4 chr12 53204600 - Exonic hg19 ESCA TCGA-IG-A625 2 In-Frame Inter-chr q22.2 q13.13 3497 ChimerSeq FusionScan TCGA_RNA-Seq G6PC3-ZNF532 G6PC3 chr17 42152138 + ZNF532 chr18 56532701 + Exonic hg19 ESCA TCGA-IG-A625 2 5'UTR-5'UTR Inter-chr q21.31 q21.32 Transcription factor 3498 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 ESCA TCGA-LN-A49K 7 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 3499 ChimerSeq FusionScan TCGA_RNA-Seq RAB3B-NRD1 RAB3B chr1 52398989 - NRD1 chr1 52306186 - Exonic hg19 ESCA TCGA-LN-A49K 2 Out-of-Frame Intra-chr p32.3 3500 ChimerSeq FusionScan TCGA_RNA-Seq NSUN3-ALCAM NSUN3 chr3 93813998 + ALCAM chr3 105238910 + Exonic hg19 ESCA TCGA-LN-A49K 2 Out-of-Frame Intra-chr q11.2 q13.11 3501 ChimerSeq FusionScan TCGA_RNA-Seq CNIH4-CNST CNIH4 chr1 224553693 + CNST chr1 246810440 + Exonic hg19 ESCA TCGA-LN-A49K 2 Out-of-Frame Intra-chr q42.11 q44 3502 ChimerSeq FusionScan TCGA_RNA-Seq PPP3CC-TNFRSF10A PPP3CC chr8 22333137 + TNFRSF10A chr8 23069725 - Exonic hg19 ESCA TCGA-LN-A49K 2 In-Frame Intra-chr p21.3 Tumor suppressor gene p21.3 Tumor suppressor gene 3503 ChimerSeq FusionScan TCGA_RNA-Seq MICALL2-CA3 MICALL2 chr7 1481827 - CA3 chr8 86354301 + Exonic hg19 ESCA TCGA-V5-A7RB 9 In-Frame Inter-chr p22.3 q21.2 Seq+ 3504 ChimerSeq FusionScan TCGA_RNA-Seq CERS6-NOSTRIN CERS6 chr2 169404211 + NOSTRIN chr2 169699501 + Exonic hg19 ESCA TCGA-V5-A7RB 7 In-Frame Intra-chr q24.3 Seq+ 3505 ChimerSeq FusionScan TCGA_RNA-Seq NFE2L3-NPY NFE2L3 chr7 26192688 + NPY chr7 24329117 + Exonic hg19 ESCA TCGA-V5-A7RB 6 Out-of-Frame Intra-chr p15.2 Transcription factor p15.3 Seq+ 3506 ChimerSeq FusionScan TCGA_RNA-Seq NFE2L3-NPY NFE2L3 chr7 26192688 + NPY chr7 24324859 + Exonic hg19 ESCA TCGA-V5-A7RB 6 CDS-5'UTR Intra-chr p15.2 Transcription factor p15.3 Seq+ 3507 ChimerSeq FusionScan TCGA_RNA-Seq LRRFIP1-RAMP1 LRRFIP1 chr2 238668848 + RAMP1 chr2 238785865 + Exonic hg19 ESCA TCGA-V5-A7RB 5 In-Frame Intra-chr q37.3 q37.3 Seq+ 3508 ChimerSeq FusionScan TCGA_RNA-Seq ASAP1-FGF12 ASAP1 chr8 131370262 - FGF12 chr3 192078327 - Exonic hg19 ESCA TCGA-V5-A7RB 3 Out-of-Frame Inter-chr q24.22 q29 Seq+ 3509 ChimerSeq FusionScan TCGA_RNA-Seq AZIN1-NDUFA13 AZIN1 chr8 103848483 - NDUFA13 chr19 19636990 + Exonic hg19 ESCA TCGA-V5-A7RB 2 Out-of-Frame Inter-chr q22.3 p13.11 Seq+ 3510 ChimerSeq FusionScan TCGA_RNA-Seq BACE2-FAM3B BACE2 chr21 42629253 + FAM3B chr21 42710304 + Exonic hg19 ESCA TCGA-V5-A7RB 2 In-Frame Intra-chr q22.2 q22.3 Seq+ 3511 ChimerSeq FusionScan TCGA_RNA-Seq RBM33-TMEM120A RBM33 chr7 155437613 + TMEM120A chr7 75618542 - Exonic hg19 ESCA TCGA-L5-A8NG 17 Out-of-Frame Intra-chr q36.3 q11.23 Seq+ 3512 ChimerSeq FusionScan TCGA_RNA-Seq MED24-NR1D1 MED24 chr17 38178207 - NR1D1 chr17 38253656 - Exonic hg19 ESCA TCGA-L5-A8NG 5 In-Frame Intra-chr q21.1 q21.1 Transcription factor Seq+ 3513 ChimerSeq FusionScan TCGA_RNA-Seq ECSIT-RGL3 ECSIT chr19 11623870 - RGL3 chr19 11508273 - Exonic hg19 ESCA TCGA-L5-A8NG 4 In-Frame Intra-chr p13.2 p13.2 Seq+ 3514 ChimerSeq FusionScan TCGA_RNA-Seq PLD1-ATP1B3 PLD1 chr3 171528188 - ATP1B3 chr3 141622461 + Exonic hg19 ESCA TCGA-L5-A8NG 2 5'UTR-CDS Intra-chr q26.31 Tumor suppressor gene q23 3515 ChimerSeq FusionScan TCGA_RNA-Seq FBL-ZNF829 FBL chr19 40327195 - ZNF829 chr19 37406153 - Exonic hg19 ESCA TCGA-L5-A8NG 2 In-Frame Intra-chr q13.12 Transcription factor Seq+ 3516 ChimerSeq FusionScan TCGA_RNA-Seq STK3-COX6C STK3 chr8 99718694 - COX6C chr8 100899846 - Exonic hg19 ESCA TCGA-L5-A4OT 15 In-Frame Intra-chr q22.2 q22.2 Seq+ 3517 ChimerSeq FusionScan TCGA_RNA-Seq RSF1-PAK1 RSF1 chr11 77531573 - PAK1 chr11 77103586 - Exonic hg19 ESCA TCGA-L5-A4OT 4 CDS-5'UTR Intra-chr q14.1 q14.1 STE:STE20 Seq+ 3518 ChimerSeq FusionScan TCGA_RNA-Seq MAPKAPK5-TRAFD1 MAPKAPK5 chr12 112308984 + TRAFD1 chr12 112568314 + Exonic hg19 ESCA TCGA-L5-A4OT 3 CDS-5'UTR Intra-chr q24.12 CAMK:MAPKAPK q24.13 Transcription factor Seq+ 3519 ChimerSeq FusionScan TCGA_RNA-Seq VCL-C10orf11 VCL chr10 75802911 + C10orf11 chr10 77795765 + Exonic hg19 ESCA TCGA-L5-A4OT 3 In-Frame Intra-chr q22.2 Seq+ 3520 ChimerSeq FusionScan TCGA_RNA-Seq ARFIP1-SMAD5 ARFIP1 chr4 153784866 + SMAD5 chr5 135483520 + Exonic hg19 ESCA TCGA-L5-A4OT 2 CDS-5'UTR Inter-chr q31.3 q31.1 Transcription factor 3521 ChimerSeq FusionScan TCGA_RNA-Seq MAPKAPK5-TRAFD1 MAPKAPK5 chr12 112308984 + TRAFD1 chr12 112572541 + Exonic hg19 ESCA TCGA-L5-A4OT 2 Out-of-Frame Intra-chr q24.12 CAMK:MAPKAPK q24.13 Transcription factor Seq+ 3522 ChimerSeq FusionScan TCGA_RNA-Seq TBCK-GSTCD TBCK chr4 107092251 - GSTCD chr4 106755617 + Exonic hg19 ESCA TCGA-L5-A4OT 2 In-Frame Intra-chr q24 Other:TBCK q24 3523 ChimerSeq FusionScan TCGA_RNA-Seq SAMD14-CCNYL1 SAMD14 chr17 48202280 - CCNYL1 chr2 208589523 + Exonic hg19 ESCA TCGA-L5-A4OT 2 In-Frame Inter-chr q21.33 q33.3 3524 ChimerSeq FusionScan TCGA_RNA-Seq C6orf123-BCAT2 C6orf123 chr6 168187993 - BCAT2 chr19 49298721 - Exonic hg19 ESCA TCGA-L5-A4OT 2 3'UTR-3'UTR Inter-chr q13.33 3525 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC11-NASP ZCCHC11 chr1 52981562 - NASP chr1 46056894 + Exonic hg19 ESCA TCGA-L5-A4OT 2 Out-of-Frame Intra-chr p32.3 p34.1 3526 ChimerSeq FusionScan TCGA_RNA-Seq MICALL2-CA3 MICALL2 chr7 1481827 - CA3 chr8 86354301 + Exonic hg19 ESCA TCGA-V5-A7RB 11 In-Frame Inter-chr p22.3 q21.2 Seq+ 3527 ChimerSeq FusionScan TCGA_RNA-Seq CERS6-NOSTRIN CERS6 chr2 169404211 + NOSTRIN chr2 169699501 + Exonic hg19 ESCA TCGA-V5-A7RB 9 In-Frame Intra-chr q24.3 Seq+ 3528 ChimerSeq FusionScan TCGA_RNA-Seq NFE2L3-NPY NFE2L3 chr7 26192688 + NPY chr7 24324859 + Exonic hg19 ESCA TCGA-V5-A7RB 8 CDS-5'UTR Intra-chr p15.2 Transcription factor p15.3 Seq+ 3529 ChimerSeq FusionScan TCGA_RNA-Seq LRRFIP1-RAMP1 LRRFIP1 chr2 238668848 + RAMP1 chr2 238785865 + Exonic hg19 ESCA TCGA-V5-A7RB 6 In-Frame Intra-chr q37.3 q37.3 Seq+ 3530 ChimerSeq FusionScan TCGA_RNA-Seq NFE2L3-NPY NFE2L3 chr7 26192688 + NPY chr7 24329117 + Exonic hg19 ESCA TCGA-V5-A7RB 4 Out-of-Frame Intra-chr p15.2 Transcription factor p15.3 Seq+ 3531 ChimerSeq FusionScan TCGA_RNA-Seq ASAP1-FGF12 ASAP1 chr8 131370262 - FGF12 chr3 192078327 - Exonic hg19 ESCA TCGA-V5-A7RB 4 Out-of-Frame Inter-chr q24.22 q29 Seq+ 3532 ChimerSeq FusionScan TCGA_RNA-Seq AZIN1-NDUFA13 AZIN1 chr8 103848483 - NDUFA13 chr19 19636990 + Exonic hg19 ESCA TCGA-V5-A7RB 2 Out-of-Frame Inter-chr q22.3 p13.11 Seq+ 3533 ChimerSeq FusionScan TCGA_RNA-Seq BACE2-FAM3B BACE2 chr21 42629253 + FAM3B chr21 42710304 + Exonic hg19 ESCA TCGA-V5-A7RB 2 In-Frame Intra-chr q22.2 q22.3 Seq+ 3534 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA13-AZIN1 NDUFA13 chr19 19627141 + AZIN1 chr8 103852051 - Exonic hg19 ESCA TCGA-V5-A7RB 2 Out-of-Frame Inter-chr p13.11 q22.3 Seq+ 3535 ChimerSeq FusionScan TCGA_RNA-Seq UCHL3-KLF5 UCHL3 chr13 76135017 + KLF5 chr13 73637961 + Exonic hg19 ESCA TCGA-V5-A7RB 2 Out-of-Frame Intra-chr q22.2 q22.1 Tumor suppressor gene Transcription factor Seq+ 3536 ChimerSeq FusionScan TCGA_RNA-Seq MAP2K7-CACNA1A MAP2K7 chr19 7968953 + CACNA1A chr19 13373647 - Exonic hg19 ESCA TCGA-IG-A3YC 3 In-Frame Intra-chr p13.2 STE:STE7 p13.13 3537 ChimerSeq FusionScan TCGA_RNA-Seq USP9X-PNPLA4 USP9X chrX 40945362 + PNPLA4 chrX 7890139 - Exonic hg19 ESCA TCGA-IG-A3YC 3 5'UTR-5'UTR Intra-chr p11.4 Oncogene p22.31 3538 ChimerSeq FusionScan TCGA_RNA-Seq KRT6A-SPINK5 KRT6A chr12 52884641 - SPINK5 chr5 147465967 + Exonic hg19 ESCA TCGA-IG-A3YC 3 In-Frame Inter-chr q13.13 q32 3539 ChimerSeq FusionScan TCGA_RNA-Seq PTRH2-APPBP2 PTRH2 chr17 57784731 - APPBP2 chr17 58556632 - Exonic hg19 ESCA TCGA-IG-A3YC 2 5'UTR-CDS Intra-chr q23.1 q23.2 3540 ChimerSeq FusionScan TCGA_RNA-Seq PLD5-ADSS PLD5 chr1 242687389 - ADSS chr1 244601070 - Exonic hg19 ESCA TCGA-IG-A3YC 2 CDS-5'UTR Intra-chr q43 q44 3541 ChimerSeq FusionScan TCGA_RNA-Seq TRA2A-AGFG2 TRA2A chr7 23547038 - AGFG2 chr7 100146444 + Exonic hg19 ESCA TCGA-IG-A3YC 2 In-Frame Intra-chr p15.3 q22.1 3542 ChimerSeq FusionScan TCGA_RNA-Seq CYTH1-CUX1 CYTH1 chr17 76696412 - CUX1 chr7 101916636 + Exonic hg19 ESCA TCGA-IG-A3YC 2 In-Frame Inter-chr q25.3 q22.1 Tumor suppressor gene Transcription factor 3543 ChimerSeq FusionScan TCGA_RNA-Seq ACSL1-CAPZB ACSL1 chr4 185701485 - CAPZB chr1 19746244 - Exonic hg19 ESCA TCGA-IG-A3YC 2 In-Frame Inter-chr q35.1 p36.13 3544 ChimerSeq FusionScan TCGA_RNA-Seq ZNF226-DDX19B ZNF226 chr19 44677105 + DDX19B chr16 70366870 + Exonic hg19 ESCA TCGA-IG-A3YC 2 In-Frame Inter-chr q13.31 Transcription factor q22.1 3545 ChimerSeq FusionScan TCGA_RNA-Seq CTNND1-TMBIM6 CTNND1 chr11 57529518 + TMBIM6 chr12 50146246 + Exonic hg19 ESCA TCGA-IG-A3YC 2 5'UTR-5'UTR Inter-chr q12.1 Tumor suppressor gene q13.12 3546 ChimerSeq FusionScan TCGA_RNA-Seq CFD-EIF3B CFD chr19 861956 + EIF3B chr7 2411411 + Exonic hg19 ESCA TCGA-L5-A88W 2 In-Frame Inter-chr p13.3 p22.3 3547 ChimerSeq FusionScan TCGA_RNA-Seq HDAC3-DIAPH1 HDAC3 chr5 141004774 - DIAPH1 chr5 140967817 - Exonic hg19 ESCA TCGA-L5-A88W 2 Out-of-Frame Intra-chr q31.3 Tumor suppressor gene q31.3 3548 ChimerSeq FusionScan TCGA_RNA-Seq ZFP36L1-DAGLB ZFP36L1 chr14 69259598 - DAGLB chr7 6450011 - Exonic hg19 ESCA TCGA-L5-A88W 2 In-Frame Inter-chr q24.1 p22.1 3549 ChimerSeq FusionScan TCGA_RNA-Seq SLCO4A1-KLC1 SLCO4A1 chr20 61273905 + KLC1 chr14 104166991 + Exonic hg19 ESCA TCGA-X8-AAAR 2 5'UTR-CDS Inter-chr q13.33 q32.33 3550 ChimerSeq FusionScan TCGA_RNA-Seq SLC35E1-IFT46 SLC35E1 chr19 16677342 - IFT46 chr11 118416568 - Exonic hg19 ESCA TCGA-X8-AAAR 2 In-Frame Inter-chr p13.11 q23.3 3551 ChimerSeq FusionScan TCGA_RNA-Seq NIN-ABHD12B NIN chr14 51288591 - ABHD12B chr14 51344669 + Exonic hg19 ESCA TCGA-X8-AAAR 2 Out-of-Frame Intra-chr q22.1 Oncogene q22.1 3552 ChimerSeq FusionScan TCGA_RNA-Seq AAK1-PAXIP1 AAK1 chr2 69870009 - PAXIP1 chr7 154755476 - Exonic hg19 ESCA TCGA-X8-AAAR 2 Out-of-Frame Inter-chr p13.3 Other:NAK q36.2 3553 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 ESCA TCGA-L5-A8NN 5 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 3554 ChimerSeq FusionScan TCGA_RNA-Seq NUP62-ATF5 NUP62 chr19 50432582 - ATF5 chr19 50435678 + Exonic hg19 ESCA TCGA-L5-A8NN 2 5'UTR-CDS Intra-chr q13.33 q13.33 Transcription factor Seq+ 3555 ChimerSeq FusionScan TCGA_RNA-Seq NKTR-CAST NKTR chr3 42674315 + CAST chr5 96097977 + Exonic hg19 ESCA TCGA-IG-A4P3 2 Out-of-Frame Inter-chr p22.1 q15 3556 ChimerSeq FusionScan TCGA_RNA-Seq CDC23-CYB5B CDC23 chr5 137542235 - CYB5B chr16 69496332 + Exonic hg19 ESCA TCGA-IG-A4P3 2 Out-of-Frame Inter-chr q31.2 q22.1 3557 ChimerSeq FusionScan TCGA_RNA-Seq SRSF3-DNAJC7 SRSF3 chr6 36566760 + DNAJC7 chr17 40135654 - Exonic hg19 ESCA TCGA-IG-A4P3 2 In-Frame Inter-chr p21.31 q21.2 3558 ChimerSeq FusionScan TCGA_RNA-Seq EML4-UGP2 EML4 chr2 42396776 + UGP2 chr2 64083439 + Exonic hg19 ESCA TCGA-IG-A4P3 2 In-Frame Intra-chr p21 Oncogene p15 3559 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPK-PHLDA2 HNRNPK chr9 86587758 - PHLDA2 chr11 2949897 - Exonic hg19 ESCA TCGA-IG-A4P3 2 CDS-3'UTR Inter-chr q21.32 p15.4 Tumor suppressor gene 3560 ChimerSeq FusionScan TCGA_RNA-Seq DSG3-ABTB2 DSG3 chr18 29046717 + ABTB2 chr11 34226237 - Exonic hg19 ESCA TCGA-IG-A4P3 2 In-Frame Inter-chr q12.1 p13 3561 ChimerSeq FusionScan TCGA_RNA-Seq SPTLC2-RBKS SPTLC2 chr14 78063528 - RBKS chr2 28070964 - Exonic hg19 ESCA TCGA-IG-A4P3 2 In-Frame Inter-chr q24.3 p23.2 3562 ChimerSeq FusionScan TCGA_RNA-Seq FBXO44-AGTRAP FBXO44 chr1 11718928 + AGTRAP chr1 11807496 + Exonic hg19 ESCA TCGA-IG-A3YB 6 In-Frame Intra-chr p36.22 p36.22 3563 ChimerSeq FusionScan TCGA_RNA-Seq SOS1-DHX57 SOS1 chr2 39237724 - DHX57 chr2 39065089 - Exonic hg19 ESCA TCGA-IG-A3YB 6 Out-of-Frame Intra-chr p22.1 p22.1 Seq+ 3564 ChimerSeq FusionScan TCGA_RNA-Seq KIF5C-STK39 KIF5C chr2 149633312 + STK39 chr2 169038600 - Exonic hg19 ESCA TCGA-IG-A3YB 2 Out-of-Frame Intra-chr q24.3 Seq+ 3565 ChimerSeq FusionScan TCGA_RNA-Seq IQCG-KIAA0226 IQCG chr3 197686399 - KIAA0226 chr3 197445001 - Exonic hg19 ESCA TCGA-IG-A3YB 2 5'UTR-5'UTR Intra-chr q29 3566 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152498705 + Exonic hg19 ESCA TCGA-IG-A3YB 2 In-Frame Intra-chr q36.1 Seq+ 3567 ChimerSeq FusionScan TCGA_RNA-Seq RFX2-MLLT1 RFX2 chr19 6110403 - MLLT1 chr19 6230724 - Exonic hg19 ESCA TCGA-Z6-A8JD 9 5'UTR-CDS Intra-chr p13.3 Transcription factor p13.3 Seq+ 3568 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 ESCA TCGA-Z6-A8JD 8 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 3569 ChimerSeq FusionScan TCGA_RNA-Seq MMP17-NOC4L MMP17 chr12 132313198 + NOC4L chr12 132635525 + Exonic hg19 ESCA TCGA-Z6-A8JD 4 Out-of-Frame Intra-chr q24.33 q24.33 Seq+ 3570 ChimerSeq FusionScan TCGA_RNA-Seq ERC1-WNT5B ERC1 chr12 1250953 + WNT5B chr12 1740463 + Exonic hg19 ESCA TCGA-Z6-A8JD 4 5'UTR-5'UTR Intra-chr p13.33 Seq+ 3571 ChimerSeq FusionScan TCGA_RNA-Seq CEP170-RAD51B CEP170 chr1 243349080 - RAD51B chr14 68758600 + Exonic hg19 ESCA TCGA-Z6-A8JD 2 In-Frame Inter-chr q24.1 3572 ChimerSeq FusionScan TCGA_RNA-Seq ITPR2-LRMP ITPR2 chr12 26540366 - LRMP chr12 25215753 + Exonic hg19 ESCA TCGA-Z6-A8JD 2 CDS-5'UTR Intra-chr p11.23 p12.1 Tumor suppressor gene 3573 ChimerSeq FusionScan TCGA_RNA-Seq RNF149-C2orf29 RNF149 chr2 101924590 - C2orf29 chr2 101879000 + Exonic hg19 ESCA TCGA-Z6-A8JD 2 In-Frame Intra-chr q11.2 3574 ChimerSeq FusionScan TCGA_RNA-Seq ANXA2-SURF1 ANXA2 chr15 60646352 - SURF1 chr9 136221812 - Exonic hg19 ESCA TCGA-Z6-A8JD 2 Out-of-Frame Inter-chr q22.2 3575 ChimerSeq FusionScan TCGA_RNA-Seq FBXW9-TRMT1 FBXW9 chr19 12801979 - TRMT1 chr19 13218673 - Exonic hg19 ESCA TCGA-Z6-A8JD 2 Out-of-Frame Intra-chr p13.13 p13.13 3576 ChimerSeq FusionScan TCGA_RNA-Seq ZNF133-ICA1 ZNF133 chr20 18269248 + ICA1 chr7 8167772 - Exonic hg19 ESCA TCGA-Z6-A8JD 2 5'UTR-CDS Inter-chr p11.23 Transcription factor p21.3 3577 ChimerSeq FusionScan TCGA_RNA-Seq UBP1-TFCP2L1 UBP1 chr3 33453072 - TFCP2L1 chr2 122004546 - Exonic hg19 ESCA TCGA-Z6-A8JD 2 In-Frame Inter-chr p22.3 Transcription factor q14.2 Transcription factor 3578 ChimerSeq FusionScan TCGA_RNA-Seq PI4KA-SNAP29 PI4KA chr22 21212857 - SNAP29 chr22 21224624 + Exonic hg19 ESCA TCGA-LN-A4A2 17 In-Frame Intra-chr q11.21 q11.21 Seq+ 3579 ChimerSeq FusionScan TCGA_RNA-Seq LPP-CLDN1 LPP chr3 188124101 + CLDN1 chr3 190030825 - Exonic hg19 ESCA TCGA-LN-A4A2 5 In-Frame Intra-chr q27.3 Oncogene q28 Tumor suppressor gene Seq+ 3580 ChimerSeq FusionScan TCGA_RNA-Seq TMEM87B-PTPN4 TMEM87B chr2 112817614 + PTPN4 chr2 120567412 + Exonic hg19 ESCA TCGA-LN-A4A2 2 CDS-5'UTR Intra-chr q13 q14.2 3581 ChimerSeq FusionScan TCGA_RNA-Seq MKL2-AKT3 MKL2 chr16 14234617 + AKT3 chr1 243736350 - Exonic hg19 ESCA TCGA-LN-A4A2 2 Out-of-Frame Inter-chr p13.12 AGC:Akt Oncogene 3582 ChimerSeq FusionScan TCGA_RNA-Seq WDR47-GNAI3 WDR47 chr1 109584483 - GNAI3 chr1 110134664 + Exonic hg19 ESCA TCGA-LN-A4A2 2 5'UTR-CDS Intra-chr p13.3 p13.3 3583 ChimerSeq FusionScan TCGA_RNA-Seq EIF2AK2-ABCC1 EIF2AK2 chr2 37384050 - ABCC1 chr16 16101672 + Exonic hg19 ESCA TCGA-LN-A4A2 2 5'UTR-CDS Inter-chr p22.2 3584 ChimerSeq FusionScan TCGA_RNA-Seq SRI-DERL2 SRI chr7 87840196 - DERL2 chr17 5383902 - Exonic hg19 ESCA TCGA-LN-A4A2 2 In-Frame Inter-chr q21.12 p13.2 3585 ChimerSeq FusionScan TCGA_RNA-Seq ITGAV-ZC3H7A ITGAV chr2 187506315 + ZC3H7A chr16 11852395 - Exonic hg19 ESCA TCGA-LN-A4A2 2 Out-of-Frame Inter-chr q32.1 Tumor suppressor gene p13.13 3586 ChimerSeq FusionScan TCGA_RNA-Seq PPP6R3-PPFIA1 PPP6R3 chr11 68228295 + PPFIA1 chr11 70218320 + Exonic hg19 ESCA TCGA-LN-A4A2 2 5'UTR-5'UTR Intra-chr q13.2 q13.3 3587 ChimerSeq FusionScan TCGA_RNA-Seq NAV3-RPL35 NAV3 chr12 78415642 + RPL35 chr9 127623834 - Exonic hg19 ESCA TCGA-LN-A4A2 2 Out-of-Frame Inter-chr q21.2 q33.3 3588 ChimerSeq FusionScan TCGA_RNA-Seq AFF1-DHRS13 AFF1 chr4 88048269 + DHRS13 chr17 27225910 - Exonic hg19 ESCA TCGA-LN-A4A2 2 Out-of-Frame Inter-chr q21.3 Oncogene q11.2 3589 ChimerSeq FusionScan TCGA_RNA-Seq FBXO42-C1orf144 FBXO42 chr1 16678749 - C1orf144 chr1 16719722 + Exonic hg19 ESCA TCGA-LN-A4A2 2 5'UTR-CDS Intra-chr p36.13 3590 ChimerSeq FusionScan TCGA_RNA-Seq VPS13B-RAD54B VPS13B chr8 100205285 + RAD54B chr8 95423543 - Exonic hg19 ESCA TCGA-LN-A4A2 2 In-Frame Intra-chr q22.2 q22.1 3591 ChimerSeq FusionScan TCGA_RNA-Seq LMBR1-NOB1 LMBR1 chr7 156685621 - NOB1 chr16 69778920 - Exonic hg19 ESCA TCGA-LN-A4A2 2 Out-of-Frame Inter-chr q36.3 q22.1 3592 ChimerSeq FusionScan TCGA_RNA-Seq FAM49B-PVT1 FAM49B chr8 130915557 - PVT1 chr8 129108763 + Exonic hg19 ESCA TCGA-LN-A4A2 2 5'UTR-5'UTR Intra-chr q24.21 q24.21 3593 ChimerSeq FusionScan TCGA_RNA-Seq LARP4B-PSMF1 LARP4B chr10 930386 - PSMF1 chr20 1143773 + Exonic hg19 ESCA TCGA-LN-A4A2 2 Out-of-Frame Inter-chr p15.3 p13 3594 ChimerSeq FusionScan TCGA_RNA-Seq MIR205HG-ATF7IP MIR205HG chr1 209602753 + ATF7IP chr12 14576842 + Exonic hg19 ESCA TCGA-LN-A4A2 2 CDS-5'UTR Inter-chr q32.2 p13.1 3595 ChimerSeq FusionScan TCGA_RNA-Seq SENP5-SELT SENP5 chr3 196630481 + SELT chr3 150340171 + Exonic hg19 ESCA TCGA-LN-A4A2 2 Out-of-Frame Intra-chr q29 3596 ChimerSeq FusionScan TCGA_RNA-Seq NUP62-GNAS NUP62 chr19 50432582 - GNAS chr20 57484216 + Exonic hg19 ESCA TCGA-LN-A4A2 2 5'UTR-5'UTR Inter-chr q13.33 q13.32 Oncogene 3597 ChimerSeq FusionScan TCGA_RNA-Seq PSAT1-WAC PSAT1 chr9 80923499 + WAC chr10 28905101 + Exonic hg19 ESCA TCGA-LN-A4A2 2 In-Frame Inter-chr q21.2 p12.1 3598 ChimerSeq FusionScan TCGA_RNA-Seq TANC2-TSHZ2 TANC2 chr17 61396451 + TSHZ2 chr20 52103682 + Exonic hg19 ESCA TCGA-L5-A8NL 7 CDS-3'UTR Inter-chr q23.2 q13.2 Transcription factor Seq+ 3599 ChimerSeq FusionScan TCGA_RNA-Seq TMEM241-SERPINB7 TMEM241 chr18 20889643 - SERPINB7 chr18 61449588 + Exonic hg19 ESCA TCGA-L5-A8NL 6 CDS-5'UTR Intra-chr q11.2 q21.33 Seq+ 3600 ChimerSeq FusionScan TCGA_RNA-Seq BCAS3-SCN4A BCAS3 chr17 59161925 + SCN4A chr17 62038791 - Exonic hg19 ESCA TCGA-L5-A8NL 6 In-Frame Intra-chr q23.2 q23.3 Seq+ 3601 ChimerSeq FusionScan TCGA_RNA-Seq POLG2-TANC2 POLG2 chr17 62476405 - TANC2 chr17 61271351 + Exonic hg19 ESCA TCGA-L5-A8NL 3 Out-of-Frame Intra-chr q23.3 q23.2 3602 ChimerSeq FusionScan TCGA_RNA-Seq PTPN2-L3MBTL4 PTPN2 chr18 12814201 - L3MBTL4 chr18 5969561 - Exonic hg19 ESCA TCGA-L5-A8NL 2 Out-of-Frame Intra-chr p11.21 Tumor suppressor gene p11.31 Tumor suppressor gene Transcription factor Seq+ 3603 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB44-SNX19 ZBTB44 chr11 130184269 - SNX19 chr11 130776616 - Exonic hg19 ESCA TCGA-L5-A8NL 2 5'UTR-CDS Intra-chr q24.3 Transcription factor q25 3604 ChimerSeq FusionScan TCGA_RNA-Seq PRICKLE1-C19orf79 PRICKLE1 chr12 42877559 - C19orf79 chr19 7695458 + Exonic hg19 ESCA TCGA-L5-A8NL 2 5'UTR-5'UTR Inter-chr q12 Tumor suppressor gene 3605 ChimerSeq FusionScan TCGA_RNA-Seq EDF1-COBRA1 EDF1 chr9 139757739 - COBRA1 chr9 140166532 + Exonic hg19 ESCA TCGA-L5-A8NL 2 Out-of-Frame Intra-chr q34.3 3606 ChimerSeq FusionScan TCGA_RNA-Seq NCOA2-MFSD10 NCOA2 chr8 71315934 - MFSD10 chr4 2935671 - Exonic hg19 ESCA TCGA-L5-A8NL 2 5'UTR-5'UTR Inter-chr q13.3 Oncogene Transcription factor p16.3 3607 ChimerSeq FusionScan TCGA_RNA-Seq ESCO1-SERPINB4 ESCO1 chr18 19140819 - SERPINB4 chr18 61310837 - Exonic hg19 ESCA TCGA-L5-A8NL 2 CDS-5'UTR Intra-chr q11.2 q21.33 3608 ChimerSeq FusionScan TCGA_RNA-Seq RNF213-ZNF384 RNF213 chr17 78355527 + ZNF384 chr12 6797392 - Exonic hg19 ESCA TCGA-R6-A8WG 2 CDS-5'UTR Inter-chr q25.3 Oncogene p13.31 Oncogene Transcription factor 3609 ChimerSeq FusionScan TCGA_RNA-Seq GATS-PILRB GATS chr7 99820219 - PILRB chr7 99952765 + Exonic hg19 ESCA TCGA-R6-A8WG 2 3'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 3610 ChimerSeq FusionScan TCGA_RNA-Seq ZDHHC17-TGIF1 ZDHHC17 chr12 77158109 + TGIF1 chr18 3456351 + Exonic hg19 ESCA TCGA-R6-A8WG 2 Out-of-Frame Inter-chr q21.2 p11.31 Transcription factor 3611 ChimerSeq FusionScan TCGA_RNA-Seq RNF123-CHMP2B RNF123 chr3 49751607 + CHMP2B chr3 87294863 + Exonic hg19 ESCA TCGA-R6-A8WG 2 Out-of-Frame Intra-chr p21.31 p11.2 Seq+ 3612 ChimerSeq FusionScan TCGA_RNA-Seq GAPVD1-RABEPK GAPVD1 chr9 128024238 + RABEPK chr9 127990188 + Exonic hg19 ESCA TCGA-ZR-A9CJ 2 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 3613 ChimerSeq FusionScan TCGA_RNA-Seq SUGT1-DUSP16 SUGT1 chr13 53254290 + DUSP16 chr12 12674397 - Exonic hg19 ESCA TCGA-ZR-A9CJ 2 CDS-5'UTR Inter-chr q14.3 3614 ChimerSeq FusionScan TCGA_RNA-Seq CERS4-HUWE1 CERS4 chr19 8321594 + HUWE1 chrX 53564657 - Exonic hg19 ESCA TCGA-ZR-A9CJ 2 Out-of-Frame Inter-chr p13.2 p11.22 3615 ChimerSeq FusionScan TCGA_RNA-Seq SRGAP2P2-FAM91A2 SRGAP2P2 chr1 143916308 + FAM91A2 chr1 149670205 + Exonic hg19 ESCA TCGA-ZR-A9CJ 2 5'UTR-5'UTR Intra-chr 3616 ChimerSeq FusionScan TCGA_RNA-Seq TNS3-GARS TNS3 chr7 47546504 - GARS chr7 30649200 + Exonic hg19 ESCA TCGA-ZR-A9CJ 2 5'UTR-CDS Intra-chr p12.3 p14.3 3617 ChimerSeq FusionScan TCGA_RNA-Seq HIVEP3-NRCAM HIVEP3 chr1 42094419 - NRCAM chr7 107800937 - Exonic hg19 ESCA TCGA-ZR-A9CJ 2 5'UTR-CDS Inter-chr p34.2 Tumor suppressor gene Transcription factor q31.1 Tumor suppressor gene 3618 ChimerSeq FusionScan TCGA_RNA-Seq FTX-WASF2 FTX chrX 73494176 - WASF2 chr1 27755443 - Exonic hg19 ESCA TCGA-ZR-A9CJ 2 3'UTR-5'UTR Inter-chr q13.2 p36.11 3619 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF18-ATL1 ARHGEF18 chr19 7460133 + ATL1 chr14 51054548 + Exonic hg19 ESCA TCGA-ZR-A9CJ 2 5'UTR-CDS Inter-chr p13.2 q22.1 3620 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57721844 + VMP1 chr17 57895072 + Exonic hg19 ESCA TCGA-R6-A6DQ 7 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 3621 ChimerSeq FusionScan TCGA_RNA-Seq PTBP1-SH3GL1 PTBP1 chr19 799443 + SH3GL1 chr19 4364218 - Exonic hg19 ESCA TCGA-R6-A6DQ 2 Out-of-Frame Intra-chr p13.3 p13.3 3622 ChimerSeq FusionScan TCGA_RNA-Seq MYO10-PFN2 MYO10 chr5 16877717 - PFN2 chr3 149686337 - Exonic hg19 ESCA TCGA-R6-A6DQ 2 In-Frame Inter-chr p15.1 q25.1 3623 ChimerSeq FusionScan TCGA_RNA-Seq EEF1G-AHNAK EEF1G chr11 62334277 - AHNAK chr11 62201363 - Exonic hg19 ESCA TCGA-L5-A8NK 4 Out-of-Frame Intra-chr q12.3 q12.3 Tumor suppressor gene Seq+ 3624 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 ESCA TCGA-L5-A8NK 2 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 3625 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 ESCA TCGA-LN-A49Y 6 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 3626 ChimerSeq FusionScan TCGA_RNA-Seq SLC25A13-MGC72080 SLC25A13 chr7 95906507 - MGC72080 chr7 97599157 - Exonic hg19 ESCA TCGA-LN-A49Y 6 3'UTR-3'UTR Intra-chr q21.3 3627 ChimerSeq FusionScan TCGA_RNA-Seq SLC25A13-CCZ1 SLC25A13 chr7 95906507 - CCZ1 chr7 5940485 + Exonic hg19 ESCA TCGA-LN-A49Y 5 Out-of-Frame Intra-chr q21.3 p22.1 3628 ChimerSeq FusionScan TCGA_RNA-Seq ORC2-C11orf82 ORC2 chr2 201796061 - C11orf82 chr11 82639818 + Exonic hg19 ESCA TCGA-LN-A49Y 4 In-Frame Inter-chr q33.1 3629 ChimerSeq FusionScan TCGA_RNA-Seq PDLIM5-MTERFD2 PDLIM5 chr4 95585186 + MTERFD2 chr2 242029459 - Exonic hg19 ESCA TCGA-LN-A49Y 2 CDS-3'UTR Inter-chr q22.3 3630 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF7-UBQLN1 ARHGEF7 chr13 111930020 + UBQLN1 chr9 86284242 - Exonic hg19 ESCA TCGA-LN-A49Y 2 Out-of-Frame Inter-chr q34 q21.32 3631 ChimerSeq FusionScan TCGA_RNA-Seq PBRM1-PCMTD1 PBRM1 chr3 52661288 - PCMTD1 chr8 52733278 - Exonic hg19 ESCA TCGA-LN-A49Y 2 Out-of-Frame Inter-chr p21.1 Oncogene Tumor suppressor gene q11.23 3632 ChimerSeq FusionScan TCGA_RNA-Seq GPN3-USP36 GPN3 chr12 110893390 - USP36 chr17 76810634 - Exonic hg19 ESCA TCGA-LN-A49Y 2 In-Frame Inter-chr q24.11 q25.3 3633 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57756880 + VMP1 chr17 57886156 + Exonic hg19 ESCA TCGA-R6-A6KZ 13 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 3634 ChimerSeq FusionScan TCGA_RNA-Seq CTBP2-TLX1NB CTBP2 chr10 126848887 - TLX1NB chr10 102886855 - Exonic hg19 ESCA TCGA-R6-A6KZ 8 5'UTR-5'UTR Intra-chr q26.13 q24.31 Seq+ 3635 ChimerSeq FusionScan TCGA_RNA-Seq NDE1-BCAR4 NDE1 chr16 15744151 + BCAR4 chr16 11914154 - Exonic hg19 ESCA TCGA-R6-A6KZ 3 5'UTR-3'UTR Intra-chr p13.11 p13.13 3636 ChimerSeq FusionScan TCGA_RNA-Seq PPFIA1-ARID4B PPFIA1 chr11 70118542 + ARID4B chr1 235359430 - Exonic hg19 ESCA TCGA-R6-A6KZ 2 Out-of-Frame Inter-chr q13.3 q42.3 3637 ChimerSeq FusionScan TCGA_RNA-Seq APLP2-OPCML APLP2 chr11 129939977 + OPCML chr11 132307253 - Exonic hg19 ESCA TCGA-R6-A6KZ 2 Out-of-Frame Intra-chr q24.3 q25 Tumor suppressor gene Seq+ 3638 ChimerSeq FusionScan TCGA_RNA-Seq KIF22-PRKCB KIF22 chr16 29802150 + PRKCB chr16 24043456 + Exonic hg19 ESCA TCGA-R6-A6XG 9 Out-of-Frame Intra-chr p11.2 p12.2 Tumor suppressor gene Seq+ 3639 ChimerSeq FusionScan TCGA_RNA-Seq DHX37-NCOR2 DHX37 chr12 125467056 - NCOR2 chr12 124922542 - Exonic hg19 ESCA TCGA-R6-A6XG 2 In-Frame Intra-chr q24.31 q24.31 3640 ChimerSeq FusionScan TCGA_RNA-Seq PAN3-ZC3H4 PAN3 chr13 28752072 + ZC3H4 chr19 47575970 - Exonic hg19 ESCA TCGA-R6-A6XG 2 In-Frame Inter-chr q12.2 q13.32 3641 ChimerSeq FusionScan TCGA_RNA-Seq GNG5-RPF1 GNG5 chr1 84971693 - RPF1 chr1 84955315 + Exonic hg19 ESCA TCGA-R6-A6XG 2 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene 3642 ChimerSeq FusionScan TCGA_RNA-Seq SEPT2-HSP90B1 SEPT2 chr2 242289618 + HSP90B1 chr12 104326054 + Exonic hg19 ESCA TCGA-R6-A6XG 2 3'UTR-CDS Inter-chr q37.3 q23.3 Tumor suppressor gene 3643 ChimerSeq FusionScan TCGA_RNA-Seq ELF1-FGFR1OP2 ELF1 chr13 41556118 - FGFR1OP2 chr12 27116274 + Exonic hg19 ESCA TCGA-IG-A4QT 3 In-Frame Inter-chr q14.11 Transcription factor p11.23 3644 ChimerSeq FusionScan TCGA_RNA-Seq SLC44A1-SNX30 SLC44A1 chr9 108007185 + SNX30 chr9 115626526 + Exonic hg19 ESCA TCGA-IG-A4QT 2 In-Frame Intra-chr q31.1 q32 3645 ChimerSeq FusionScan TCGA_RNA-Seq TUBGCP2-PAOX TUBGCP2 chr10 135122326 - PAOX chr10 135202459 + Exonic hg19 ESCA TCGA-IG-A4QT 2 5'UTR-CDS Intra-chr q26.3 q26.3 3646 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175394270 - Exonic hg19 ESCA TCGA-IG-A4QT 2 5'UTR-CDS Inter-chr q21.1 q35.2 3647 ChimerSeq FusionScan TCGA_RNA-Seq KDM2A-FOXN2 KDM2A chr11 66888829 + FOXN2 chr2 48600430 + Exonic hg19 ESCA TCGA-IG-A4QT 2 Out-of-Frame Inter-chr q13.2 Transcription factor p16.3 Transcription factor 3648 ChimerSeq FusionScan TCGA_RNA-Seq TXNDC12-ARIH2 TXNDC12 chr1 52507208 - ARIH2 chr3 48960180 + Exonic hg19 ESCA TCGA-IG-A4QT 2 CDS-5'UTR Inter-chr p32.3 p21.31 3649 ChimerSeq FusionScan TCGA_RNA-Seq DYNLL1-RNF10 DYNLL1 chr12 120934356 + RNF10 chr12 120992520 + Exonic hg19 ESCA TCGA-LN-A4A9 24 Out-of-Frame Intra-chr q24.31 q24.31 Seq+ 3650 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 ESCA TCGA-LN-A4A9 8 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 3651 ChimerSeq FusionScan TCGA_RNA-Seq ADCY2-ITCH ADCY2 chr5 7414883 + ITCH chr20 33026278 + Exonic hg19 ESCA TCGA-LN-A4A9 5 Out-of-Frame Inter-chr p15.31 q11.22 3652 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP17-CDC5L ARHGAP17 chr16 24955091 - CDC5L chr6 44376180 + Exonic hg19 ESCA TCGA-LN-A4A9 4 CDS-5'UTR Inter-chr p12.1 p21.1 Transcription factor 3653 ChimerSeq FusionScan TCGA_RNA-Seq HDLBP-LRRFIP1 HDLBP chr2 242202125 - LRRFIP1 chr2 238688064 + Exonic hg19 ESCA TCGA-LN-A4A9 2 In-Frame Intra-chr q37.3 q37.3 3654 ChimerSeq FusionScan TCGA_RNA-Seq ACTR5-FBXO18 ACTR5 chr20 37396239 + FBXO18 chr10 5944982 + Exonic hg19 ESCA TCGA-LN-A4A9 2 Out-of-Frame Inter-chr q11.23 p15.1 3655 ChimerSeq FusionScan TCGA_RNA-Seq PTPRF-TPD52 PTPRF chr1 44054671 + TPD52 chr8 80976828 - Exonic hg19 ESCA TCGA-LN-A4A9 2 In-Frame Inter-chr p34.2 q21.13 3656 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-PION PTPN12 chr7 77221573 + PION chr7 77011960 - Exonic hg19 ESCA TCGA-LN-A4A9 2 In-Frame Intra-chr q11.23 Tumor suppressor gene Seq+ 3657 ChimerSeq FusionScan TCGA_RNA-Seq MTMR10-TMEM85 MTMR10 chr15 31266516 - TMEM85 chr15 34519893 + Exonic hg19 ESCA TCGA-LN-A4A9 2 In-Frame Intra-chr q13.3 3658 ChimerSeq FusionScan TCGA_RNA-Seq RYK-HTATIP2 RYK chr3 133894452 - HTATIP2 chr11 20398125 + Exonic hg19 ESCA TCGA-LN-A4A9 2 Out-of-Frame Inter-chr q22.2 TK:Ryk p15.1 Tumor suppressor gene 3659 ChimerSeq FusionScan TCGA_RNA-Seq DYNLL1-RNF10 DYNLL1 chr12 120934356 + RNF10 chr12 120995084 + Exonic hg19 ESCA TCGA-LN-A4A9 2 In-Frame Intra-chr q24.31 q24.31 Seq+ 3660 ChimerSeq FusionScan TCGA_RNA-Seq THEMIS-SLK THEMIS chr6 128221986 - SLK chr10 105750432 + Exonic hg19 ESCA TCGA-LN-A4A9 2 Out-of-Frame Inter-chr q24.33 STE:STE20 3661 ChimerSeq FusionScan TCGA_RNA-Seq ST3GAL3-PTPRF ST3GAL3 chr1 44280605 + PTPRF chr1 44069086 + Exonic hg19 ESCA TCGA-LN-A7HV 6 Out-of-Frame Intra-chr p34.1 p34.2 Seq+ 3662 ChimerSeq FusionScan TCGA_RNA-Seq RAB9A-EGFL6 RAB9A chrX 13722021 + EGFL6 chrX 13635848 + Exonic hg19 ESCA TCGA-LN-A7HV 4 5'UTR-CDS Intra-chr p22.2 p22.2 Seq+ 3663 ChimerSeq FusionScan TCGA_RNA-Seq RNGTT-SRSF12 RNGTT chr6 89673064 - SRSF12 chr6 89816977 - Exonic hg19 ESCA TCGA-LN-A7HV 3 Out-of-Frame Intra-chr q15 q15 Seq+ 3664 ChimerSeq FusionScan TCGA_RNA-Seq COL1A1-DOK5 COL1A1 chr17 48266737 - DOK5 chr20 53266953 + Exonic hg19 ESCA TCGA-LN-A7HV 2 Out-of-Frame Inter-chr q21.33 Oncogene q13.2 3665 ChimerSeq FusionScan TCGA_RNA-Seq SNRPD1-ABHD3 SNRPD1 chr18 19192404 + ABHD3 chr18 19239304 - Exonic hg19 ESCA TCGA-LN-A7HV 2 In-Frame Intra-chr q11.2 q11.2 3666 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 ESCA TCGA-LN-A7HV 2 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 3667 ChimerSeq FusionScan TCGA_RNA-Seq ITGA9-SPATS2L ITGA9 chr3 37792060 + SPATS2L chr2 201194153 + Exonic hg19 ESCA TCGA-LN-A7HV 2 CDS-5'UTR Inter-chr p22.2 Oncogene q33.1 3668 ChimerSeq FusionScan TCGA_RNA-Seq JAG2-INF2 JAG2 chr14 105611266 - INF2 chr14 105185131 + Exonic hg19 ESCA TCGA-LN-A7HV 2 Out-of-Frame Intra-chr q32.33 q32.33 3669 ChimerSeq FusionScan TCGA_RNA-Seq PCP4L1-SDHC PCP4L1 chr1 161228773 + SDHC chr1 161293403 + Exonic hg19 ESCA TCGA-LN-A7HV 2 Out-of-Frame Intra-chr q23.3 q23.3 Oncogene 3670 ChimerSeq FusionScan TCGA_RNA-Seq AP2B1-GAS2L2 AP2B1 chr17 33984810 + GAS2L2 chr17 34077337 - Exonic hg19 ESCA TCGA-R6-A8W8 5 Out-of-Frame Intra-chr q12 q12 Seq+ 3671 ChimerSeq FusionScan TCGA_RNA-Seq ZNF318-FOXP4 ZNF318 chr6 43316061 - FOXP4 chr6 41533482 + Exonic hg19 ESCA TCGA-R6-A8W8 2 CDS-5'UTR Intra-chr p21.1 Transcription factor p21.1 Oncogene Transcription factor Seq+ 3672 ChimerSeq FusionScan TCGA_RNA-Seq C20orf11-NT5C2 C20orf11 chr20 61569605 + NT5C2 chr10 104899236 - Exonic hg19 ESCA TCGA-R6-A8W8 2 5'UTR-CDS Inter-chr q24.33 3673 ChimerSeq FusionScan TCGA_RNA-Seq NFE2L3-CBX3 NFE2L3 chr7 26192688 + CBX3 chr7 26245987 + Exonic hg19 ESCA TCGA-R6-A8W8 2 In-Frame Intra-chr p15.2 Transcription factor p15.2 3674 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R12C-SERINC2 PPP1R12C chr19 55610151 - SERINC2 chr1 31905813 + Exonic hg19 ESCA TCGA-VR-AA7I 3 Out-of-Frame Inter-chr q13.42 p35.2 3675 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D2B-PKM2 TBC1D2B chr15 78369634 - PKM2 chr15 72511451 - Exonic hg19 ESCA TCGA-VR-AA7I 2 Out-of-Frame Intra-chr q25.1 3676 ChimerSeq FusionScan TCGA_RNA-Seq ARID1A-WDTC1 ARID1A chr1 27024031 + WDTC1 chr1 27587446 + Exonic hg19 ESCA TCGA-L5-A893 4 CDS-5'UTR Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 Seq+ 3677 ChimerSeq FusionScan TCGA_RNA-Seq BTBD9-MANEA BTBD9 chr6 38224184 - MANEA chr6 96044612 + Exonic hg19 ESCA TCGA-L5-A893 3 Out-of-Frame Intra-chr p21.2 q16.1 3678 ChimerSeq FusionScan TCGA_RNA-Seq CAPZA1-C1QBP CAPZA1 chr1 113162505 + C1QBP chr17 5338286 - Exonic hg19 ESCA TCGA-L5-A893 2 Out-of-Frame Inter-chr p13.2 p13.2 3679 ChimerSeq FusionScan TCGA_RNA-Seq ZNF43-NCOR1 ZNF43 chr19 22034706 - NCOR1 chr17 16012226 - Exonic hg19 ESCA TCGA-L5-A893 2 In-Frame Inter-chr p12 Transcription factor p11.2 Oncogene 3680 ChimerSeq FusionScan TCGA_RNA-Seq JHDM1D-DDX5 JHDM1D chr7 139876543 - DDX5 chr17 62500960 - Exonic hg19 ESCA TCGA-L5-A893 2 In-Frame Inter-chr q23.3 3681 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 ESCA TCGA-L5-A893 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 3682 ChimerSeq FusionScan TCGA_RNA-Seq UBP1-TFCP2L1 UBP1 chr3 33453072 - TFCP2L1 chr2 122004546 - Exonic hg19 ESCA TCGA-L5-A893 2 In-Frame Inter-chr p22.3 Transcription factor q14.2 Transcription factor 3683 ChimerSeq FusionScan TCGA_RNA-Seq POGLUT1-FAM116A POGLUT1 chr3 119204234 + FAM116A chr3 57631483 - Exonic hg19 ESCA TCGA-L5-A893 2 In-Frame Intra-chr q13.33 3684 ChimerSeq FusionScan TCGA_RNA-Seq IST1-RBL2 IST1 chr16 71956583 + RBL2 chr16 53493362 + Exonic hg19 ESCA TCGA-L5-A893 2 In-Frame Intra-chr q22.2 q12.2 Tumor suppressor gene 3685 ChimerSeq FusionScan TCGA_RNA-Seq SEC23B-CSRP2BP SEC23B chr20 18496380 + CSRP2BP chr20 18162353 + Exonic hg19 ESCA TCGA-L5-A4ON 16 In-Frame Intra-chr p11.23 Seq+ 3686 ChimerSeq FusionScan TCGA_RNA-Seq ITPK1-BTBD7 ITPK1 chr14 93542939 - BTBD7 chr14 93730339 - Exonic hg19 ESCA TCGA-L5-A4ON 11 Out-of-Frame Intra-chr Seq+ 3687 ChimerSeq FusionScan TCGA_RNA-Seq ITPR2-KIAA0922 ITPR2 chr12 26774055 - KIAA0922 chr4 154501977 + Exonic hg19 ESCA TCGA-L5-A4ON 4 In-Frame Inter-chr p11.23 q31.3 3688 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 ESCA TCGA-L5-A4ON 3 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 3689 ChimerSeq FusionScan TCGA_RNA-Seq KRAS-ETNK1 KRAS chr12 25398207 - ETNK1 chr12 22796696 + Exonic hg19 ESCA TCGA-L5-A4ON 2 In-Frame Intra-chr p12.1 Oncogene p12.1 3690 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-SHARPIN CPSF6 chr12 69656342 + SHARPIN chr8 145158128 - Exonic hg19 ESCA TCGA-L5-A4ON 2 3'UTR-3'UTR Inter-chr q15 q24.3 3691 ChimerSeq FusionScan TCGA_RNA-Seq FTSJD2-CCDC167 FTSJD2 chr6 37447031 + CCDC167 chr6 37452970 - Exonic hg19 ESCA TCGA-L5-A4ON 2 Out-of-Frame Intra-chr p21.2 3692 ChimerSeq FusionScan TCGA_RNA-Seq PTPRH-HSPBP1 PTPRH chr19 55707889 - HSPBP1 chr19 55785990 - Exonic hg19 ESCA TCGA-L5-A4ON 2 In-Frame Intra-chr q13.42 q13.42 3693 ChimerSeq FusionScan TCGA_RNA-Seq CCDC53-RNF128 CCDC53 chr12 102419751 - RNF128 chrX 106016142 + Exonic hg19 ESCA TCGA-L5-A4ON 2 Out-of-Frame Inter-chr q22.3 3694 ChimerSeq FusionScan TCGA_RNA-Seq UPF1-FKBP1A UPF1 chr19 18976259 + FKBP1A chr20 1373525 - Exonic hg19 ESCA TCGA-L5-A4ON 2 In-Frame Inter-chr p13.11 p13 3695 ChimerSeq FusionScan TCGA_RNA-Seq TUBGCP2-PAOX TUBGCP2 chr10 135122326 - PAOX chr10 135202459 + Exonic hg19 ESCA TCGA-IG-A4QT 2 5'UTR-CDS Intra-chr q26.3 q26.3 3696 ChimerSeq FusionScan TCGA_RNA-Seq ELF1-FGFR1OP2 ELF1 chr13 41556118 - FGFR1OP2 chr12 27116274 + Exonic hg19 ESCA TCGA-IG-A4QT 2 In-Frame Inter-chr q14.11 Transcription factor p11.23 3697 ChimerSeq FusionScan TCGA_RNA-Seq CASK-SEPN1 CASK chrX 41712367 - SEPN1 chr1 26127533 + Exonic hg19 ESCA TCGA-L7-A56G 2 Out-of-Frame Inter-chr p11.4 CAMK:CASK 3698 ChimerSeq FusionScan TCGA_RNA-Seq BCL6-SRSF7 BCL6 chr3 187446147 - SRSF7 chr2 38975795 - Exonic hg19 ESCA TCGA-L7-A56G 2 Out-of-Frame Inter-chr q27.3 Oncogene Transcription factor p22.1 3699 ChimerSeq FusionScan TCGA_RNA-Seq PLCB2-EPN1 PLCB2 chr15 40584049 - EPN1 chr19 56206513 + Exonic hg19 ESCA TCGA-L7-A56G 2 In-Frame Inter-chr q15.1 q13.42 3700 ChimerSeq FusionScan TCGA_RNA-Seq KLHL20-DARS2 KLHL20 chr1 173703425 + DARS2 chr1 173819464 + Exonic hg19 ESCA TCGA-L7-A56G 2 In-Frame Intra-chr q25.1 q25.1 3701 ChimerSeq FusionScan TCGA_RNA-Seq PAPSS1-GAB1 PAPSS1 chr4 108565957 - GAB1 chr4 144336629 + Exonic hg19 ESCA TCGA-L7-A56G 2 In-Frame Intra-chr q25 q31.21 3702 ChimerSeq FusionScan TCGA_RNA-Seq RAD54L2-STT3B RAD54L2 chr3 51575666 + STT3B chr3 31656596 + Exonic hg19 ESCA TCGA-L7-A56G 2 5'UTR-CDS Intra-chr p21.2 p23 3703 ChimerSeq FusionScan TCGA_RNA-Seq ZNF611-PIGX ZNF611 chr19 53217267 - PIGX chr3 196454793 + Exonic hg19 ESCA TCGA-IC-A6RF 3 Out-of-Frame Inter-chr q13.41 Transcription factor q29 3704 ChimerSeq FusionScan TCGA_RNA-Seq VCL-ADK VCL chr10 75867112 + ADK chr10 76360136 + Exonic hg19 ESCA TCGA-IC-A6RF 3 In-Frame Intra-chr q22.2 q22.2 Seq+ 3705 ChimerSeq FusionScan TCGA_RNA-Seq ZNF578-PIGX ZNF578 chr19 53008034 + PIGX chr3 196454793 + Exonic hg19 ESCA TCGA-IC-A6RF 3 Out-of-Frame Inter-chr q13.41 Transcription factor q29 3706 ChimerSeq FusionScan TCGA_RNA-Seq SREBF2-SEPT9 SREBF2 chr22 42229362 + SEPT9 chr17 75398140 + Exonic hg19 ESCA TCGA-IC-A6RF 2 In-Frame Inter-chr q13.2 Transcription factor 3707 ChimerSeq FusionScan TCGA_RNA-Seq YWHAE-MYO1C YWHAE chr17 1303340 - MYO1C chr17 1387597 - Exonic hg19 ESCA TCGA-IC-A6RF 2 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 3708 ChimerSeq FusionScan TCGA_RNA-Seq STRN-USP25 STRN chr2 37193372 - USP25 chr21 17236586 + Exonic hg19 ESCA TCGA-IC-A6RF 2 In-Frame Inter-chr p22.2 q21.1 3709 ChimerSeq FusionScan TCGA_RNA-Seq MZT2B-SMPD4 MZT2B chr2 130940348 + SMPD4 chr2 130940323 - Exonic hg19 ESCA TCGA-IC-A6RF 2 CDS-5'UTR Intra-chr q21.1 q21.1 3710 ChimerSeq FusionScan TCGA_RNA-Seq IGHMBP2-CPT1A IGHMBP2 chr11 68685351 + CPT1A chr11 68582955 - Exonic hg19 ESCA TCGA-LN-A9FO 10 CDS-5'UTR Intra-chr q13.3 q13.3 Seq+ 3711 ChimerSeq FusionScan TCGA_RNA-Seq PDPR-DDHD2 PDPR chr16 70154622 + DDHD2 chr8 38117557 + Exonic hg19 ESCA TCGA-LN-A9FO 2 In-Frame Inter-chr q22.1 p11.23 3712 ChimerSeq FusionScan TCGA_RNA-Seq WDR61-RAD21 WDR61 chr15 78581960 - RAD21 chr8 117859930 - Exonic hg19 ESCA TCGA-LN-A9FO 2 Out-of-Frame Inter-chr q25.1 q24.11 3713 ChimerSeq FusionScan TCGA_RNA-Seq TOX2-PSMB1 TOX2 chr20 42543630 + PSMB1 chr6 170858201 - Exonic hg19 ESCA TCGA-LN-A9FO 2 Out-of-Frame Inter-chr q13.12 3714 ChimerSeq FusionScan TCGA_RNA-Seq UBE2E3-METTL8 UBE2E3 chr2 181848820 + METTL8 chr2 172217023 - Exonic hg19 ESCA TCGA-LN-A9FO 2 In-Frame Intra-chr q31.3 q31.1 3715 ChimerSeq FusionScan TCGA_RNA-Seq FAM175A-MRPS18C FAM175A chr4 84384646 - MRPS18C chr4 84380892 + Exonic hg19 ESCA TCGA-LN-A9FO 2 Out-of-Frame Intra-chr q21.23 q21.23 3716 ChimerSeq FusionScan TCGA_RNA-Seq EZH1-FOXK2 EZH1 chr17 40855757 - FOXK2 chr17 80543779 + Exonic hg19 ESCA TCGA-LN-A9FO 2 In-Frame Intra-chr q21.2 Tumor suppressor gene q25.3 Transcription factor 3717 ChimerSeq FusionScan TCGA_RNA-Seq ZMYND8-RNF114 ZMYND8 chr20 45915972 - RNF114 chr20 48568612 + Exonic hg19 ESCA TCGA-LN-A9FO 2 In-Frame Intra-chr q13.12 q13.13 3718 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-USP32 CLTC chr17 57697534 + USP32 chr17 58422969 - Exonic hg19 ESCA TCGA-V5-A7RE 31 Out-of-Frame Intra-chr q23.1 q23.2 Seq+ 3719 ChimerSeq FusionScan TCGA_RNA-Seq ALDOA-BCAR4 ALDOA chr16 30077248 + BCAR4 chr16 11914154 - Exonic hg19 ESCA TCGA-V5-A7RE 31 5'UTR-3'UTR Intra-chr p11.2 p13.13 Seq+ 3720 ChimerSeq FusionScan TCGA_RNA-Seq MMD-HDAC5 MMD chr17 53499030 - HDAC5 chr17 42165966 - Exonic hg19 ESCA TCGA-V5-A7RE 21 Out-of-Frame Intra-chr q22 q21.31 Seq+ 3721 ChimerSeq FusionScan TCGA_RNA-Seq ALDOA-BCAR4 ALDOA chr16 30075826 + BCAR4 chr16 11914154 - Exonic hg19 ESCA TCGA-V5-A7RE 13 5'UTR-3'UTR Intra-chr p11.2 p13.13 Seq+ 3722 ChimerSeq FusionScan TCGA_RNA-Seq SMARCD2-STRADA SMARCD2 chr17 61910946 - STRADA chr17 61784778 - Exonic hg19 ESCA TCGA-V5-A7RE 10 Out-of-Frame Intra-chr q23.3 q23.3 Tumor suppressor gene Seq+ 3723 ChimerSeq FusionScan TCGA_RNA-Seq CDC27-CCT6B CDC27 chr17 45266511 - CCT6B chr17 33281618 - Exonic hg19 ESCA TCGA-V5-A7RE 10 In-Frame Intra-chr q21.32 q12 Seq+ 3724 ChimerSeq FusionScan TCGA_RNA-Seq ALDOA-BCAR4 ALDOA chr16 30077248 + BCAR4 chr16 11915612 - Exonic hg19 ESCA TCGA-V5-A7RE 9 5'UTR-3'UTR Intra-chr p11.2 p13.13 Seq+ 3725 ChimerSeq FusionScan TCGA_RNA-Seq LLGL2-FAM222B LLGL2 chr17 73555491 + FAM222B chr17 27093725 - Exonic hg19 ESCA TCGA-V5-A7RE 9 CDS-5'UTR Intra-chr q25.1 q11.2 Seq+ 3726 ChimerSeq FusionScan TCGA_RNA-Seq STRADA-GRB2 STRADA chr17 61790765 - GRB2 chr17 73328878 - Exonic hg19 ESCA TCGA-V5-A7RE 7 In-Frame Intra-chr q23.3 Tumor suppressor gene q25.1 Seq+ 3727 ChimerSeq FusionScan TCGA_RNA-Seq SPAG9-TRIM37 SPAG9 chr17 49057106 - TRIM37 chr17 57168701 - Exonic hg19 ESCA TCGA-V5-A7RE 5 Out-of-Frame Intra-chr q21.33 q22 Seq+ 3728 ChimerSeq FusionScan TCGA_RNA-Seq MAP3K3-DBF4B MAP3K3 chr17 61730016 + DBF4B chr17 42824450 + Exonic hg19 ESCA TCGA-V5-A7RE 4 Out-of-Frame Intra-chr q23.3 STE:STE11 q21.31 Seq+ 3729 ChimerSeq FusionScan TCGA_RNA-Seq SMARCD2-STRADA SMARCD2 chr17 61910946 - STRADA chr17 61784099 - Exonic hg19 ESCA TCGA-V5-A7RE 3 In-Frame Intra-chr q23.3 q23.3 Tumor suppressor gene Seq+ 3730 ChimerSeq FusionScan TCGA_RNA-Seq ALDOA-BCAR4 ALDOA chr16 30075826 + BCAR4 chr16 11915612 - Exonic hg19 ESCA TCGA-V5-A7RE 3 5'UTR-3'UTR Intra-chr p11.2 p13.13 Seq+ 3731 ChimerSeq FusionScan TCGA_RNA-Seq CDC27-CCT6B CDC27 chr17 45266511 - CCT6B chr17 33285713 - Exonic hg19 ESCA TCGA-V5-A7RE 3 In-Frame Intra-chr q21.32 q12 Seq+ 3732 ChimerSeq FusionScan TCGA_RNA-Seq MCM7-C9orf3 MCM7 chr7 99691795 - C9orf3 chr9 97848963 + Exonic hg19 ESCA TCGA-V5-A7RE 2 CDS-3'UTR Inter-chr q22.1 q22.32 3733 ChimerSeq FusionScan TCGA_RNA-Seq CASC3-NFE2L1 CASC3 chr17 38325699 + NFE2L1 chr17 46133747 + Exonic hg19 ESCA TCGA-V5-A7RE 2 In-Frame Intra-chr q21.1 q21.32 Transcription factor 3734 ChimerSeq FusionScan TCGA_RNA-Seq STX8-COX10 STX8 chr17 9281868 - COX10 chr17 14005434 + Exonic hg19 ESCA TCGA-V5-A7RE 2 In-Frame Intra-chr p13.1 p12 3735 ChimerSeq FusionScan TCGA_RNA-Seq SUPT6H-PROCA1 SUPT6H chr17 27017247 + PROCA1 chr17 27031861 - Exonic hg19 ESCA TCGA-V5-A7RE 2 In-Frame Intra-chr q11.2 q11.2 Seq+ 3736 ChimerSeq FusionScan TCGA_RNA-Seq SPAG9-TRIM37 SPAG9 chr17 49059884 - TRIM37 chr17 57168701 - Exonic hg19 ESCA TCGA-V5-A7RE 2 In-Frame Intra-chr q21.33 q22 Seq+ 3737 ChimerSeq FusionScan TCGA_RNA-Seq DDAH2-SLC44A4 DDAH2 chr6 31697827 - SLC44A4 chr6 31833561 - Exonic hg19 ESCA TCGA-2H-A9GJ 19 5'UTR-5'UTR Intra-chr Seq+ 3738 ChimerSeq FusionScan TCGA_RNA-Seq IRF7-RCC1 IRF7 chr11 615344 - RCC1 chr1 28843236 + Exonic hg19 ESCA TCGA-2H-A9GJ 17 CDS-5'UTR Inter-chr Transcription factor p35.3 Seq+ 3739 ChimerSeq FusionScan TCGA_RNA-Seq KDM4A-MPL KDM4A chr1 44169783 + MPL chr1 43805634 + Exonic hg19 ESCA TCGA-2H-A9GJ 10 In-Frame Intra-chr p34.2 p34.2 Oncogene Seq+ 3740 ChimerSeq FusionScan TCGA_RNA-Seq IRF7-RCC1 IRF7 chr11 615344 - RCC1 chr1 28856369 + Exonic hg19 ESCA TCGA-2H-A9GJ 9 CDS-5'UTR Inter-chr Transcription factor p35.3 Seq+ 3741 ChimerSeq FusionScan TCGA_RNA-Seq EPB41-POLR2L EPB41 chr1 29213722 + POLR2L chr11 840480 - Exonic hg19 ESCA TCGA-2H-A9GJ 6 5'UTR-CDS Inter-chr p35.3 Tumor suppressor gene p15.5 Seq+ 3742 ChimerSeq FusionScan TCGA_RNA-Seq ARL17B-KANSL1 ARL17B chr17 44430185 - KANSL1 chr17 44128070 - Exonic hg19 ESCA TCGA-2H-A9GJ 6 3'UTR-3'UTR Intra-chr 3743 ChimerSeq FusionScan TCGA_RNA-Seq ARL17A-KANSL1 ARL17A chr17 44648124 - KANSL1 chr17 44128070 - Exonic hg19 ESCA TCGA-2H-A9GJ 6 5'UTR-CDS Intra-chr q21.31 Seq+ 3744 ChimerSeq FusionScan TCGA_RNA-Seq PITPNM3-PELP1 PITPNM3 chr17 6428675 - PELP1 chr17 4594737 - Exonic hg19 ESCA TCGA-2H-A9GJ 6 Out-of-Frame Intra-chr p13.1 p13.2 Seq+ 3745 ChimerSeq FusionScan TCGA_RNA-Seq KDM4A-MPL KDM4A chr1 44137546 + MPL chr1 43803769 + Exonic hg19 ESCA TCGA-2H-A9GJ 6 Out-of-Frame Intra-chr p34.2 p34.2 Oncogene Seq+ 3746 ChimerSeq FusionScan TCGA_RNA-Seq TFDP2-XRN1 TFDP2 chr3 141820576 - XRN1 chr3 142103527 - Exonic hg19 ESCA TCGA-2H-A9GJ 4 Out-of-Frame Intra-chr q23 Transcription factor q23 Seq+ 3747 ChimerSeq FusionScan TCGA_RNA-Seq TPX2-RIF1 TPX2 chr20 30347982 + RIF1 chr2 152315324 + Exonic hg19 ESCA TCGA-2H-A9GJ 4 Out-of-Frame Inter-chr q11.21 q23.3 Seq+ 3748 ChimerSeq FusionScan TCGA_RNA-Seq EPSTI1-DNAJC15 EPSTI1 chr13 43491676 - DNAJC15 chr13 43659903 + Exonic hg19 ESCA TCGA-2H-A9GJ 3 Out-of-Frame Intra-chr q14.11 q14.11 Seq+ 3749 ChimerSeq FusionScan TCGA_RNA-Seq CDK13-C7orf10 CDK13 chr7 40102699 + C7orf10 chr7 40356358 + Exonic hg19 ESCA TCGA-2H-A9GJ 3 Out-of-Frame Intra-chr p14.1 Seq+ 3750 ChimerSeq FusionScan TCGA_RNA-Seq STK10-UBTD2 STK10 chr5 171544484 - UBTD2 chr5 171661362 - Exonic hg19 ESCA TCGA-2H-A9GJ 3 In-Frame Intra-chr q35.1 Tumor suppressor gene q35.1 Seq+ 3751 ChimerSeq FusionScan TCGA_RNA-Seq SLC20A2-VDAC3 SLC20A2 chr8 42294506 - VDAC3 chr8 42251362 + Exonic hg19 ESCA TCGA-2H-A9GJ 2 CDS-5'UTR Intra-chr p11.21 p11.21 3752 ChimerSeq FusionScan TCGA_RNA-Seq VDAC3-ZBTB10 VDAC3 chr8 42249446 + ZBTB10 chr8 81426144 + Exonic hg19 ESCA TCGA-2H-A9GJ 2 5'UTR-CDS Intra-chr p11.21 q21.13 Transcription factor 3753 ChimerSeq FusionScan TCGA_RNA-Seq ASCC3-ITPK1 ASCC3 chr6 101328936 - ITPK1 chr14 93483146 - Exonic hg19 ESCA TCGA-2H-A9GJ 2 5'UTR-CDS Inter-chr q16.3 3754 ChimerSeq FusionScan TCGA_RNA-Seq DAP3-MAP6D1 DAP3 chr1 155658965 + MAP6D1 chr3 183535899 - Exonic hg19 ESCA TCGA-2H-A9GJ 2 5'UTR-CDS Inter-chr q22 q27.1 3755 ChimerSeq FusionScan TCGA_RNA-Seq KDM4A-MPL KDM4A chr1 44134970 + MPL chr1 43803769 + Exonic hg19 ESCA TCGA-2H-A9GJ 2 In-Frame Intra-chr p34.2 p34.2 Oncogene Seq+ 3756 ChimerSeq FusionScan TCGA_RNA-Seq SPECC1L-SUSD2 SPECC1L chr22 24765288 + SUSD2 chr22 24579024 + Exonic hg19 ESCA TCGA-2H-A9GJ 2 Out-of-Frame Intra-chr q11.23 q11.23 3757 ChimerSeq FusionScan TCGA_RNA-Seq PPP4R2-KIDINS220 PPP4R2 chr3 73047309 + KIDINS220 chr2 8919944 - Exonic hg19 ESCA TCGA-2H-A9GJ 2 Out-of-Frame Inter-chr p13 p25.1 Seq+ 3758 ChimerSeq FusionScan TCGA_RNA-Seq SLC20A2-VDAC3 SLC20A2 chr8 42294506 - VDAC3 chr8 42251727 + Exonic hg19 ESCA TCGA-2H-A9GJ 2 CDS-5'UTR Intra-chr p11.21 p11.21 3759 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 ESCA TCGA-2H-A9GJ 2 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 3760 ChimerSeq FusionScan TCGA_RNA-Seq FLJ39080-PAG1 FLJ39080 chr8 75615917 + PAG1 chr8 81942324 - Exonic hg19 ESCA TCGA-2H-A9GJ 2 5'UTR-5'UTR Intra-chr q21.13 3761 ChimerSeq FusionScan TCGA_RNA-Seq CYP4F11-FAM95B1 CYP4F11 chr19 16038021 - FAM95B1 chr9 42470479 + Exonic hg19 ESCA TCGA-L5-A88Z 3 CDS-5'UTR Inter-chr p13.12 p11.2 3762 ChimerSeq FusionScan TCGA_RNA-Seq ANKS3-SEPT12 ANKS3 chr16 4774750 - SEPT12 chr16 4829787 - Exonic hg19 ESCA TCGA-S8-A6BW 4 In-Frame Intra-chr p13.3 p13.3 Seq+ 3763 ChimerSeq FusionScan TCGA_RNA-Seq ASH2L-IDS ASH2L chr8 37968351 + IDS chrX 148564749 - Exonic hg19 ESCA TCGA-S8-A6BW 2 Out-of-Frame Inter-chr p11.23 q28 3764 ChimerSeq FusionScan TCGA_RNA-Seq STARD3-RAB5C STARD3 chr17 37810003 + RAB5C chr17 40282608 - Exonic hg19 ESCA TCGA-M9-A5M8 16 Out-of-Frame Intra-chr q12 q21.2 Seq+ 3765 ChimerSeq FusionScan TCGA_RNA-Seq FAM135A-LAMA2 FAM135A chr6 71162274 + LAMA2 chr6 129371062 + Exonic hg19 ESCA TCGA-M9-A5M8 9 In-Frame Intra-chr q13 q22.33 Seq+ 3766 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-MIEN1 GRB7 chr17 37894645 + MIEN1 chr17 37886544 - Exonic hg19 ESCA TCGA-M9-A5M8 6 5'UTR-CDS Intra-chr q12 q12 Seq+ 3767 ChimerSeq FusionScan TCGA_RNA-Seq STARD3-RAB5C STARD3 chr17 37793484 + RAB5C chr17 40282608 - Exonic hg19 ESCA TCGA-M9-A5M8 6 5'UTR-5'UTR Intra-chr q12 q21.2 Seq+ 3768 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-MIEN1 GRB7 chr17 37894386 + MIEN1 chr17 37886544 - Exonic hg19 ESCA TCGA-M9-A5M8 6 5'UTR-CDS Intra-chr q12 q12 Seq+ 3769 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-KRT10 ERBB2 chr17 37851434 + KRT10 chr17 38977369 - Exonic hg19 ESCA TCGA-M9-A5M8 4 5'UTR-CDS Intra-chr q12 Oncogene q21.2 Seq+ 3770 ChimerSeq FusionScan TCGA_RNA-Seq ME2-SMAD4 ME2 chr18 48405678 + SMAD4 chr18 48604625 + Exonic hg19 ESCA TCGA-M9-A5M8 4 5'UTR-CDS Intra-chr q21.2 q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 3771 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-STARD3 ERBB2 chr17 37872858 + STARD3 chr17 37816463 + Exonic hg19 ESCA TCGA-M9-A5M8 2 In-Frame Intra-chr q12 Oncogene q12 Seq+ 3772 ChimerSeq FusionScan TCGA_RNA-Seq MACF1-C12orf23 MACF1 chr1 39854330 + C12orf23 chr12 107360888 + Exonic hg19 ESCA TCGA-M9-A5M8 2 CDS-5'UTR Inter-chr p34.3 3773 ChimerSeq FusionScan TCGA_RNA-Seq ANXA2-RNF111 ANXA2 chr15 60690141 - RNF111 chr15 59323002 + Exonic hg19 ESCA TCGA-M9-A5M8 2 5'UTR-5'UTR Intra-chr q22.2 q22.1 Tumor suppressor gene 3774 ChimerSeq FusionScan TCGA_RNA-Seq REPS1-FOXO3 REPS1 chr6 139308666 - FOXO3 chr6 108882288 + Exonic hg19 ESCA TCGA-M9-A5M8 2 CDS-5'UTR Intra-chr q24.1 q21 Oncogene Tumor suppressor gene Transcription factor 3775 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-KRT10 ERBB2 chr17 37856564 + KRT10 chr17 38977369 - Exonic hg19 ESCA TCGA-M9-A5M8 2 Out-of-Frame Intra-chr q12 Oncogene q21.2 Seq+ 3776 ChimerSeq FusionScan TCGA_RNA-Seq ZFAND3-FTSJD2 ZFAND3 chr6 37787792 + FTSJD2 chr6 37438796 + Exonic hg19 ESCA TCGA-LN-A4A5 5 In-Frame Intra-chr p21.2 3777 ChimerSeq FusionScan TCGA_RNA-Seq NIPBL-WDR70 NIPBL chr5 36877280 + WDR70 chr5 37438023 + Exonic hg19 ESCA TCGA-LN-A4A5 2 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 3778 ChimerSeq FusionScan TCGA_RNA-Seq BICD2-IPPK BICD2 chr9 95477534 - IPPK chr9 95420963 - Exonic hg19 ESCA TCGA-LN-A4A5 2 In-Frame Intra-chr q22.31 q22.31 3779 ChimerSeq FusionScan TCGA_RNA-Seq MBTPS1-TAF1C MBTPS1 chr16 84120962 - TAF1C chr16 84213950 - Exonic hg19 ESCA TCGA-JY-A6FA 24 In-Frame Intra-chr q24.1 q24.1 Seq+ 3780 ChimerSeq FusionScan TCGA_RNA-Seq CDH13-WFDC1 CDH13 chr16 83520260 + WFDC1 chr16 84358024 + Exonic hg19 ESCA TCGA-JY-A6FA 4 Out-of-Frame Intra-chr q23.3 Tumor suppressor gene q24.1 Tumor suppressor gene Seq+ 3781 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-PSMB3 ERBB2 chr17 37876087 + PSMB3 chr17 36916683 + Exonic hg19 ESCA TCGA-JY-A6FA 4 In-Frame Intra-chr q12 Oncogene Seq+ 3782 ChimerSeq FusionScan TCGA_RNA-Seq TOP1-LPIN3 TOP1 chr20 39658095 + LPIN3 chr20 39974435 + Exonic hg19 ESCA TCGA-JY-A6FA 4 CDS-5'UTR Intra-chr q12 Oncogene q12 Seq+ 3783 ChimerSeq FusionScan TCGA_RNA-Seq CYP4F11-FAM95B1 CYP4F11 chr19 16038021 - FAM95B1 chr9 42470479 + Exonic hg19 ESCA TCGA-JY-A6FA 2 CDS-5'UTR Inter-chr p13.12 p11.2 3784 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0664-NR1D1 KIAA0664 chr17 2599452 - NR1D1 chr17 38249535 - Exonic hg19 ESCA TCGA-JY-A6FA 2 Out-of-Frame Intra-chr q21.1 Transcription factor 3785 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP11A-CHRFAM7A ARHGAP11A chr15 32921003 + CHRFAM7A chr15 30675585 - Exonic hg19 ESCA TCGA-JY-A6FA 2 CDS-5'UTR Intra-chr 3786 ChimerSeq FusionScan TCGA_RNA-Seq RBM6-MON1A RBM6 chr3 50000118 + MON1A chr3 49950792 - Exonic hg19 ESCA TCGA-JY-A6FA 2 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 3787 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 ESCA TCGA-L5-A8NN 3 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 3788 ChimerSeq FusionScan TCGA_RNA-Seq ABL1-APBA1 ABL1 chr9 133710912 + APBA1 chr9 72132195 - Exonic hg19 ESCA TCGA-V5-AASW 3 CDS-5'UTR Intra-chr q34.12 TK:Abl Oncogene q21.12 Seq+ 3789 ChimerSeq FusionScan TCGA_RNA-Seq RAC1-ZNF586 RAC1 chr7 6431672 + ZNF586 chr19 58287910 + Exonic hg19 ESCA TCGA-V5-AASW 2 In-Frame Inter-chr p22.1 Oncogene q13.43 Transcription factor 3790 ChimerSeq FusionScan TCGA_RNA-Seq CEP72-EXOC3 CEP72 chr5 648031 + EXOC3 chr5 453484 + Exonic hg19 ESCA TCGA-V5-AASW 2 Out-of-Frame Intra-chr p15.33 Seq+ 3791 ChimerSeq FusionScan TCGA_RNA-Seq GNAQ-FBP1 GNAQ chr9 80646015 - FBP1 chr9 97382773 - Exonic hg19 ESCA TCGA-V5-AASW 2 Out-of-Frame Intra-chr q21.2 Oncogene q22.32 Tumor suppressor gene Seq+ 3792 ChimerSeq FusionScan TCGA_RNA-Seq RALGAPB-KCNB1 RALGAPB chr20 37128276 + KCNB1 chr20 47991529 - Exonic hg19 ESCA TCGA-VR-A8EQ 10 Out-of-Frame Intra-chr q11.23 q13.13 Seq+ 3793 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R12C-CNN2 PPP1R12C chr19 55610151 - CNN2 chr19 1036128 + Exonic hg19 ESCA TCGA-VR-A8EQ 2 In-Frame Intra-chr q13.42 p13.3 Seq+ 3794 ChimerSeq FusionScan TCGA_RNA-Seq SARS-LPCAT4 SARS chr1 109778053 + LPCAT4 chr15 34657902 - Exonic hg19 ESCA TCGA-VR-A8EQ 2 In-Frame Inter-chr p13.3 q14 3795 ChimerSeq FusionScan TCGA_RNA-Seq FAM59A-GLRX3 FAM59A chr18 30050270 - GLRX3 chr10 131967696 + Exonic hg19 ESCA TCGA-VR-A8EQ 2 Out-of-Frame Inter-chr q26.3 3796 ChimerSeq FusionScan TCGA_RNA-Seq ZNF519-PPP4R1 ZNF519 chr18 14132273 - PPP4R1 chr18 9563548 - Exonic hg19 ESCA TCGA-VR-A8EQ 2 Out-of-Frame Intra-chr p11.21 Transcription factor p11.22 3797 ChimerSeq FusionScan TCGA_RNA-Seq TMEM241-TRAPPC8 TMEM241 chr18 20948678 - TRAPPC8 chr18 29477854 - Exonic hg19 ESCA TCGA-VR-A8EQ 2 In-Frame Intra-chr q11.2 q12.1 3798 ChimerSeq FusionScan TCGA_RNA-Seq GTF2IRD1-RPSA GTF2IRD1 chr7 73868506 + RPSA chr3 39450096 + Exonic hg19 ESCA TCGA-VR-A8EQ 2 5'UTR-CDS Inter-chr q11.23 Transcription factor p22.1 3799 ChimerSeq FusionScan TCGA_RNA-Seq FTO-ZNF423 FTO chr16 53738141 + ZNF423 chr16 49559405 - Exonic hg19 ESCA TCGA-JY-A6FE 8 Out-of-Frame Intra-chr q12.2 q12.1 Transcription factor Seq+ 3800 ChimerSeq FusionScan TCGA_RNA-Seq EEA1-LRRIQ1 EEA1 chr12 93322818 - LRRIQ1 chr12 85497781 + Exonic hg19 ESCA TCGA-JY-A6FE 6 Out-of-Frame Intra-chr q22 Transcription factor q21.31 Seq+ 3801 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-COPZ2 RCC1 chr1 28834672 + COPZ2 chr17 46111310 - Exonic hg19 ESCA TCGA-JY-A6FE 2 5'UTR-CDS Inter-chr p35.3 q21.32 3802 ChimerSeq FusionScan TCGA_RNA-Seq FN1-HNRPDL FN1 chr2 216238044 - HNRPDL chr4 83346036 - Exonic hg19 ESCA TCGA-JY-A6FE 2 CDS-3'UTR Inter-chr q35 Oncogene 3803 ChimerSeq FusionScan TCGA_RNA-Seq VPS29-CORO1C VPS29 chr12 110939853 - CORO1C chr12 109095099 - Exonic hg19 ESCA TCGA-JY-A6FE 2 CDS-5'UTR Intra-chr q24.11 q24.11 3804 ChimerSeq FusionScan TCGA_RNA-Seq AFF4-SPATA21 AFF4 chr5 132298950 - SPATA21 chr1 16757917 - Exonic hg19 ESCA TCGA-LN-A49M 3 5'UTR-5'UTR Inter-chr q31.1 p36.13 Seq+ 3805 ChimerSeq FusionScan TCGA_RNA-Seq MYOF-PKM2 MYOF chr10 95241863 - PKM2 chr15 72499618 - Exonic hg19 ESCA TCGA-LN-A49M 2 Out-of-Frame Inter-chr q23.33 3806 ChimerSeq FusionScan TCGA_RNA-Seq MAP3K5-UBE3D MAP3K5 chr6 136901438 - UBE3D chr6 83667169 - Exonic hg19 ESCA TCGA-LN-A49M 2 Out-of-Frame Intra-chr q23.3 STE:STE11 q14.1 3807 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57746301 + VMP1 chr17 57915655 + Exonic hg19 ESCA TCGA-LN-A49M 2 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 3808 ChimerSeq FusionScan TCGA_RNA-Seq ATF6-STX6 ATF6 chr1 161772062 + STX6 chr1 180962561 - Exonic hg19 ESCA TCGA-LN-A49M 2 In-Frame Intra-chr q23.3 Transcription factor q25.3 3809 ChimerSeq FusionScan TCGA_RNA-Seq ATG2B-CCNL1 ATG2B chr14 96755992 - CCNL1 chr3 156868170 - Exonic hg19 ESCA TCGA-LN-A49M 2 Out-of-Frame Inter-chr q32.2 q25.31 3810 ChimerSeq FusionScan TCGA_RNA-Seq MICAL3-CECR5 MICAL3 chr22 18304192 - CECR5 chr22 17630635 - Exonic hg19 ESCA TCGA-LN-A49M 2 In-Frame Intra-chr q11.21 3811 ChimerSeq FusionScan TCGA_RNA-Seq ZNF474-COL16A1 ZNF474 chr5 121465378 + COL16A1 chr1 32126720 - Exonic hg19 ESCA TCGA-LN-A49M 2 5'UTR-CDS Inter-chr q23.2 Transcription factor p35.2 3812 ChimerSeq FusionScan TCGA_RNA-Seq FNBP1-PLOD1 FNBP1 chr9 132687238 - PLOD1 chr1 12017898 + Exonic hg19 ESCA TCGA-LN-A49M 2 In-Frame Inter-chr q34.11 p36.22 3813 ChimerSeq FusionScan TCGA_RNA-Seq ATP5J-EBP ATP5J chr21 27107797 - EBP chrX 48382086 + Exonic hg19 ESCA TCGA-LN-A49M 2 5'UTR-5'UTR Inter-chr q21.3 p11.23 3814 ChimerSeq FusionScan TCGA_RNA-Seq LTBR-SCNN1A LTBR chr12 6494545 + SCNN1A chr12 6458571 - Exonic hg19 ESCA TCGA-LN-A49M 2 In-Frame Intra-chr p13.31 p13.31 3815 ChimerSeq FusionScan TCGA_RNA-Seq WDR44-DOCK11 WDR44 chrX 117544922 + DOCK11 chrX 117758501 + Exonic hg19 ESCA TCGA-VR-A8EW 7 In-Frame Intra-chr q24 q24 Seq+ 3816 ChimerSeq FusionScan TCGA_RNA-Seq GTF3C3-COL5A2 GTF3C3 chr2 197645282 - COL5A2 chr2 189917528 - Exonic hg19 ESCA TCGA-VR-A8EW 4 In-Frame Intra-chr q33.1 q32.2 Seq+ 3817 ChimerSeq FusionScan TCGA_RNA-Seq KAT6A-SPPL2A KAT6A chr8 41832221 - SPPL2A chr15 51041943 - Exonic hg19 ESCA TCGA-VR-A8EW 3 In-Frame Inter-chr p11.21 Oncogene q21.2 3818 ChimerSeq FusionScan TCGA_RNA-Seq PGLYRP3-SPRR2G PGLYRP3 chr1 153274884 - SPRR2G chr1 153122607 - Exonic hg19 ESCA TCGA-VR-A8EW 3 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 3819 ChimerSeq FusionScan TCGA_RNA-Seq ZNF124-FAM48A ZNF124 chr1 247335149 - FAM48A chr13 37586434 - Exonic hg19 ESCA TCGA-VR-A8EW 2 In-Frame Inter-chr q44 Transcription factor 3820 ChimerSeq FusionScan TCGA_RNA-Seq PKP3-BAIAP2 PKP3 chr11 397662 + BAIAP2 chr17 79089569 + Exonic hg19 ESCA TCGA-VR-A8EW 2 Out-of-Frame Inter-chr p15.5 q25.3 3821 ChimerSeq FusionScan TCGA_RNA-Seq KRT6B-PGD KRT6B chr12 52842625 - PGD chr1 10463127 + Exonic hg19 ESCA TCGA-VR-A8EW 2 In-Frame Inter-chr q13.13 p36.22 3822 ChimerSeq FusionScan TCGA_RNA-Seq PBX4-ZC3HAV1 PBX4 chr19 19710100 - ZC3HAV1 chr7 138774505 - Exonic hg19 ESCA TCGA-VR-A8EW 2 Out-of-Frame Inter-chr p13.11 Transcription factor q34 3823 ChimerSeq FusionScan TCGA_RNA-Seq FBXL8-SLC35E2B FBXL8 chr16 67193959 + SLC35E2B chr1 1608285 - Exonic hg19 ESCA TCGA-VR-A8EW 2 5'UTR-5'UTR Inter-chr q22.1 p36.33 3824 ChimerSeq FusionScan TCGA_RNA-Seq SSH1-RAP1B SSH1 chr12 109246413 - RAP1B chr12 69042478 + Exonic hg19 ESCA TCGA-VR-A8EW 2 CDS-5'UTR Intra-chr q24.11 q15 3825 ChimerSeq FusionScan TCGA_RNA-Seq RBM47-NAB1 RBM47 chr4 40631412 - NAB1 chr2 191520702 + Exonic hg19 ESCA TCGA-VR-A8EW 2 5'UTR-5'UTR Inter-chr p14 q32.2 3826 ChimerSeq FusionScan TCGA_RNA-Seq ABL1-NTRK2 ABL1 chr9 133710912 + NTRK2 chr9 87338487 + Exonic hg19 ESCA TCGA-VR-A8EW 2 In-Frame Intra-chr q34.12 TK:Abl Oncogene q21.33 Oncogene 3827 ChimerSeq FusionScan TCGA_RNA-Seq NAMPT-CEP290 NAMPT chr7 105915391 - CEP290 chr12 88452797 - Exonic hg19 ESCA TCGA-VR-A8EW 2 In-Frame Inter-chr q22.3 q21.32 3828 ChimerSeq FusionScan TCGA_RNA-Seq NQO1-COA5 NQO1 chr16 69752025 - COA5 chr2 99217256 - Exonic hg19 ESCA TCGA-VR-A8EW 2 In-Frame Inter-chr q22.1 q11.2 3829 ChimerSeq FusionScan TCGA_RNA-Seq LPAR5-MAPKAPK3 LPAR5 chr12 6745072 - MAPKAPK3 chr3 50683140 + Exonic hg19 ESCA TCGA-VR-A8EW 2 5'UTR-CDS Inter-chr p13.31 p21.2 CAMK:MAPKAPK 3830 ChimerSeq FusionScan TCGA_RNA-Seq MB21D1-BTRC MB21D1 chr6 74161247 - BTRC chr10 103281395 + Exonic hg19 ESCA TCGA-VR-A8EW 2 In-Frame Inter-chr q13 q24.32 3831 ChimerSeq FusionScan TCGA_RNA-Seq KLK9-CELA1 KLK9 chr19 51506959 - CELA1 chr12 51723617 - Exonic hg19 ESCA TCGA-VR-A8EW 2 In-Frame Inter-chr q13.41 q13.13 3832 ChimerSeq FusionScan TCGA_RNA-Seq RPL10-CST4 RPL10 chrX 153628282 + CST4 chr20 23666614 - Exonic hg19 ESCA TCGA-VR-A8EW 2 Out-of-Frame Inter-chr q28 Tumor suppressor gene p11.21 3833 ChimerSeq FusionScan TCGA_RNA-Seq TRAPPC6B-CTAGE5 TRAPPC6B chr14 39639218 - CTAGE5 chr14 39746137 + Exonic hg19 ESCA TCGA-VR-A8EW 2 In-Frame Intra-chr q21.1 q21.1 3834 ChimerSeq FusionScan TCGA_RNA-Seq SSH2-SUCLG1 SSH2 chr17 28029976 - SUCLG1 chr2 84660559 - Exonic hg19 ESCA TCGA-VR-A8EW 2 In-Frame Inter-chr q11.2 p11.2 3835 ChimerSeq FusionScan TCGA_RNA-Seq ETV6-PSPC1 ETV6 chr12 11803094 + PSPC1 chr13 20251963 - Exonic hg19 ESCA TCGA-VR-A8EW 2 CDS-3'UTR Inter-chr p13.2 Tumor suppressor gene Transcription factor q12.11 3836 ChimerSeq FusionScan TCGA_RNA-Seq JMJD1C-TMOD3 JMJD1C chr10 65024410 - TMOD3 chr15 52186011 + Exonic hg19 ESCA TCGA-VR-A8EW 2 Out-of-Frame Inter-chr q21.3 q21.2 3837 ChimerSeq FusionScan TCGA_RNA-Seq UBA3-RAB12 UBA3 chr3 69110964 - RAB12 chr18 8624935 + Exonic hg19 ESCA TCGA-VR-A8EW 2 In-Frame Inter-chr p14.1 p11.22 3838 ChimerSeq FusionScan TCGA_RNA-Seq PINX1-FDFT1 PINX1 chr8 10677702 - FDFT1 chr8 11666302 + Exonic hg19 ESCA TCGA-VR-A8EW 2 In-Frame Intra-chr p23.1 Tumor suppressor gene p23.1 3839 ChimerSeq FusionScan TCGA_RNA-Seq DHX9-XPR1 DHX9 chr1 182829319 + XPR1 chr1 180651495 + Exonic hg19 ESCA TCGA-VR-A8EW 2 In-Frame Intra-chr q25.3 q25.3 3840 ChimerSeq FusionScan TCGA_RNA-Seq DDX5-MRPS7 DDX5 chr17 62502193 - MRPS7 chr17 73258577 + Exonic hg19 ESCA TCGA-VR-A8EW 2 In-Frame Intra-chr q23.3 q25.1 3841 ChimerSeq FusionScan TCGA_RNA-Seq CLN6-PIAS1 CLN6 chr15 68510873 - PIAS1 chr15 68466069 + Exonic hg19 ESCA TCGA-VR-A8EW 2 In-Frame Intra-chr q23 q23 Tumor suppressor gene 3842 ChimerSeq FusionScan TCGA_RNA-Seq WIPF2-CD99 WIPF2 chr17 38375744 + CD99 chrY 2591354 + Exonic hg19 ESCA TCGA-VR-A8EW 2 5'UTR-CDS Inter-chr q21.2 p22.33 Seq+ 3843 ChimerSeq FusionScan TCGA_RNA-Seq HNRPDL-GSTA4 HNRPDL chr4 83347189 - GSTA4 chr6 52849403 - Exonic hg19 ESCA TCGA-IG-A5S3 2 3'UTR-CDS Inter-chr p12.2 3844 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 ESCA TCGA-VR-A8EP 5 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 3845 ChimerSeq FusionScan TCGA_RNA-Seq CEP170-RAD51B CEP170 chr1 243349080 - RAD51B chr14 68758600 + Exonic hg19 ESCA TCGA-VR-A8EP 2 In-Frame Inter-chr q24.1 3846 ChimerSeq FusionScan TCGA_RNA-Seq TMEM108-SLC24A4 TMEM108 chr3 132948195 + SLC24A4 chr14 92900255 + Exonic hg19 ESCA TCGA-VR-A8EP 2 In-Frame Inter-chr q22.1 q32.12 3847 ChimerSeq FusionScan TCGA_RNA-Seq SNIP1-GNL2 SNIP1 chr1 38005757 - GNL2 chr1 38034903 - Exonic hg19 ESCA TCGA-VR-A8EP 2 Out-of-Frame Intra-chr p34.3 p34.3 3848 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0753-WSB1 KIAA0753 chr17 6524107 - WSB1 chr17 25636125 + Exonic hg19 ESCA TCGA-VR-A8EP 2 Out-of-Frame Intra-chr p13.1 q11.1 3849 ChimerSeq FusionScan TCGA_RNA-Seq AXIN1-TMEM8A AXIN1 chr16 347055 - TMEM8A chr16 422727 - Exonic hg19 ESCA TCGA-L5-A43C 8 Out-of-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 3850 ChimerSeq FusionScan TCGA_RNA-Seq MAGOHB-CSDA MAGOHB chr12 10762429 - CSDA chr12 10865932 - Exonic hg19 ESCA TCGA-L5-A43C 6 In-Frame Intra-chr p13.2 3851 ChimerSeq FusionScan TCGA_RNA-Seq IMPA2-GNAL IMPA2 chr18 11981764 + GNAL chr18 11862393 + Exonic hg19 ESCA TCGA-L5-A43C 4 Out-of-Frame Intra-chr p11.21 p11.21 Seq+ 3852 ChimerSeq FusionScan TCGA_RNA-Seq GLCE-NOX5 GLCE chr15 69502745 + NOX5 chr15 69347673 + Exonic hg19 ESCA TCGA-L5-A43C 3 5'UTR-5'UTR Intra-chr q23 q23 Seq+ 3853 ChimerSeq FusionScan TCGA_RNA-Seq WDR59-RARA WDR59 chr16 74982416 - RARA chr17 38487108 + Exonic hg19 ESCA TCGA-L5-A43C 2 CDS-5'UTR Inter-chr q23.1 q21.2 Oncogene Transcription factor 3854 ChimerSeq FusionScan TCGA_RNA-Seq KDM4B-RNF126 KDM4B chr19 5144913 + RNF126 chr19 652884 - Exonic hg19 ESCA TCGA-L5-A43C 2 In-Frame Intra-chr p13.3 p13.3 3855 ChimerSeq FusionScan TCGA_RNA-Seq AXIN1-TMEM8A AXIN1 chr16 347055 - TMEM8A chr16 422283 - Exonic hg19 ESCA TCGA-L5-A43C 2 Out-of-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 3856 ChimerSeq FusionScan TCGA_RNA-Seq PINX1-SOX17 PINX1 chr8 10683661 - SOX17 chr8 55371617 + Exonic hg19 ESCA TCGA-L5-A43C 2 In-Frame Intra-chr p23.1 Tumor suppressor gene q11.23 Transcription factor 3857 ChimerSeq FusionScan TCGA_RNA-Seq LSM12-TIA1 LSM12 chr17 42141168 - TIA1 chr2 70444126 - Exonic hg19 ESCA TCGA-L5-A43C 2 In-Frame Inter-chr q21.31 p13.3 3858 ChimerSeq FusionScan TCGA_RNA-Seq SYNRG-HNF1B SYNRG chr17 35921296 - HNF1B chr17 36070671 - Exonic hg19 ESCA TCGA-L5-A88T 4 In-Frame Intra-chr q12 Transcription factor 3859 ChimerSeq FusionScan TCGA_RNA-Seq GPRC5A-APOLD1 GPRC5A chr12 13044598 + APOLD1 chr12 12939842 + Exonic hg19 ESCA TCGA-L5-A88T 3 5'UTR-CDS Intra-chr p13.1 Tumor suppressor gene p13.1 Seq+ 3860 ChimerSeq FusionScan TCGA_RNA-Seq FBXO9-SF1 FBXO9 chr6 52957622 + SF1 chr11 64537880 - Exonic hg19 ESCA TCGA-L5-A88T 2 In-Frame Inter-chr p12.1 q13.1 3861 ChimerSeq FusionScan TCGA_RNA-Seq C10orf28-AVPI1 C10orf28 chr10 99894463 + AVPI1 chr10 99439672 - Exonic hg19 ESCA TCGA-L5-A88T 2 5'UTR-5'UTR Intra-chr q24.2 3862 ChimerSeq FusionScan TCGA_RNA-Seq SLC35E2B-FAM208A SLC35E2B chr1 1599765 - FAM208A chr3 56707753 - Exonic hg19 ESCA TCGA-L5-A88T 2 Out-of-Frame Inter-chr p36.33 p14.3 3863 ChimerSeq FusionScan TCGA_RNA-Seq MRPL30-STAT1 MRPL30 chr2 99797712 + STAT1 chr2 191856046 - Exonic hg19 ESCA TCGA-L5-A88T 2 5'UTR-CDS Intra-chr q11.2 q32.2 Tumor suppressor gene Transcription factor 3864 ChimerSeq FusionScan TCGA_RNA-Seq UBP1-TFCP2L1 UBP1 chr3 33453072 - TFCP2L1 chr2 122004546 - Exonic hg19 ESCA TCGA-L5-A88T 2 In-Frame Inter-chr p22.3 Transcription factor q14.2 Transcription factor 3865 ChimerSeq FusionScan TCGA_RNA-Seq HSP90AB1-MKL2 HSP90AB1 chr6 44220004 + MKL2 chr16 14354765 + Exonic hg19 ESCA TCGA-L5-A88T 2 Out-of-Frame Inter-chr p21.1 Oncogene p13.12 3866 ChimerSeq FusionScan TCGA_RNA-Seq FAM118A-CYB5R3 FAM118A chr22 45719308 + CYB5R3 chr22 43032852 - Exonic hg19 ESCA TCGA-JY-A93D 2 In-Frame Intra-chr q13.31 q13.2 3867 ChimerSeq FusionScan TCGA_RNA-Seq ZFY-HNRNPC ZFY chrY 2803487 + HNRNPC chr14 21702388 - Exonic hg19 ESCA TCGA-JY-A93D 2 5'UTR-5'UTR Inter-chr p11.2 Transcription factor q11.2 3868 ChimerSeq FusionScan TCGA_RNA-Seq IFIT2-PBX2 IFIT2 chr10 91061885 + PBX2 chr6 32155559 - Exonic hg19 ESCA TCGA-JY-A93D 2 CDS-5'UTR Inter-chr q23.31 p21.32 Transcription factor 3869 ChimerSeq FusionScan TCGA_RNA-Seq LAMA3-APOBEC1 LAMA3 chr18 21519350 + APOBEC1 chr12 7805431 - Exonic hg19 ESCA TCGA-L5-A8NJ 7 In-Frame Inter-chr q11.2 p13.31 Seq+ 3870 ChimerSeq FusionScan TCGA_RNA-Seq ACACA-C17orf78 ACACA chr17 35766351 - C17orf78 chr17 35746180 + Exonic hg19 ESCA TCGA-L5-A8NJ 3 Out-of-Frame Intra-chr 3871 ChimerSeq FusionScan TCGA_RNA-Seq PLCH1-CDK5RAP2 PLCH1 chr3 155301260 - CDK5RAP2 chr9 123334319 - Exonic hg19 ESCA TCGA-L5-A8NJ 2 Out-of-Frame Inter-chr q25.31 q33.2 3872 ChimerSeq FusionScan TCGA_RNA-Seq PLD1-MEIS1 PLD1 chr3 171528188 - MEIS1 chr2 66739280 + Exonic hg19 ESCA TCGA-L5-A8NJ 2 5'UTR-CDS Inter-chr q26.31 Tumor suppressor gene p14 Transcription factor 3873 ChimerSeq FusionScan TCGA_RNA-Seq SF1-NCBP2 SF1 chr11 64543969 - NCBP2 chr3 196664502 - Exonic hg19 ESCA TCGA-L5-A8NJ 2 In-Frame Inter-chr q13.1 q29 3874 ChimerSeq FusionScan TCGA_RNA-Seq PITPNC1-TEX14 PITPNC1 chr17 65529066 + TEX14 chr17 56729363 - Exonic hg19 ESCA TCGA-L5-A8NJ 2 CDS-5'UTR Intra-chr q24.2 q22 3875 ChimerSeq FusionScan TCGA_RNA-Seq ATP5D-SNHG12 ATP5D chr19 1242608 + SNHG12 chr1 28906493 - Exonic hg19 ESCA TCGA-L5-A8NJ 2 CDS-3'UTR Inter-chr p13.3 p35.3 3876 ChimerSeq FusionScan TCGA_RNA-Seq USP36-EXOSC9 USP36 chr17 76814748 - EXOSC9 chr4 122737523 + Exonic hg19 ESCA TCGA-IG-A7DP 2 Out-of-Frame Inter-chr q25.3 q27 3877 ChimerSeq FusionScan TCGA_RNA-Seq IP6K1-DAG1 IP6K1 chr3 49785250 - DAG1 chr3 49547851 + Exonic hg19 ESCA TCGA-IG-A7DP 2 CDS-5'UTR Intra-chr p21.31 p21.31 3878 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-KIAA0368 RCC1 chr1 28835417 + KIAA0368 chr9 114141010 - Exonic hg19 ESCA TCGA-JY-A93F 2 5'UTR-CDS Inter-chr p35.3 q31.3 3879 ChimerSeq FusionScan TCGA_RNA-Seq CARM1-NDUFS1 CARM1 chr19 11019883 + NDUFS1 chr2 207007555 - Exonic hg19 ESCA TCGA-JY-A93F 2 In-Frame Inter-chr p13.2 3880 ChimerSeq FusionScan TCGA_RNA-Seq CTCF-KIAA0895L CTCF chr16 67605167 + KIAA0895L chr16 67212407 - Exonic hg19 ESCA TCGA-JY-A93F 2 5'UTR-CDS Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 Seq+ 3881 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP28-L3MBTL4 ARHGAP28 chr18 6873774 + L3MBTL4 chr18 6301956 - Exonic hg19 ESCA TCGA-L5-A4OR 12 In-Frame Intra-chr p11.31 p11.31 Tumor suppressor gene Transcription factor Seq+ 3882 ChimerSeq FusionScan TCGA_RNA-Seq L3MBTL4-C18orf1 L3MBTL4 chr18 6301901 - C18orf1 chr18 13438242 + Exonic hg19 ESCA TCGA-L5-A4OR 12 In-Frame Intra-chr p11.31 Tumor suppressor gene Transcription factor 3883 ChimerSeq FusionScan TCGA_RNA-Seq EPC1-ARHGAP28 EPC1 chr10 32580090 - ARHGAP28 chr18 6873407 + Exonic hg19 ESCA TCGA-L5-A4OR 12 In-Frame Inter-chr p11.22 p11.31 Seq+ 3884 ChimerSeq FusionScan TCGA_RNA-Seq EPC1-L3MBTL4 EPC1 chr10 32580090 - L3MBTL4 chr18 6301956 - Exonic hg19 ESCA TCGA-L5-A4OR 4 In-Frame Inter-chr p11.22 p11.31 Tumor suppressor gene Transcription factor 3885 ChimerSeq FusionScan TCGA_RNA-Seq PTGES3-SPATS2 PTGES3 chr12 57081781 - SPATS2 chr12 49908337 + Exonic hg19 ESCA TCGA-L5-A4OR 3 In-Frame Intra-chr q13.3 q13.12 Seq+ 3886 ChimerSeq FusionScan TCGA_RNA-Seq CNOT2-DAD1 CNOT2 chr12 70637260 + DAD1 chr14 23044133 - Exonic hg19 ESCA TCGA-L5-A4OR 2 5'UTR-CDS Inter-chr q15 q11.2 3887 ChimerSeq FusionScan TCGA_RNA-Seq UBE2G1-ANKFY1 UBE2G1 chr17 4269565 - ANKFY1 chr17 4145743 - Exonic hg19 ESCA TCGA-LN-A7HW 5 In-Frame Intra-chr p13.2 p13.2 Seq+ 3888 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 ESCA TCGA-LN-A7HW 2 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 3889 ChimerSeq FusionScan TCGA_RNA-Seq ATP7A-SEMA5A ATP7A chrX 77298286 + SEMA5A chr5 9119253 - Exonic hg19 ESCA TCGA-LN-A7HW 2 Out-of-Frame Inter-chr q21.1 p15.31 3890 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-BAGE5 MLL3 chr7 151960100 - BAGE5 chr21 11026839 - Exonic hg19 ESCA TCGA-2H-A9GL 6 CDS-3'UTR Inter-chr Tumor suppressor gene 3891 ChimerSeq FusionScan TCGA_RNA-Seq PYGB-CDC20B PYGB chr20 25229057 + CDC20B chr5 54410146 - Exonic hg19 ESCA TCGA-2H-A9GL 4 Out-of-Frame Inter-chr p11.21 q11.2 3892 ChimerSeq FusionScan TCGA_RNA-Seq AGAP1-WRB AGAP1 chr2 236403493 + WRB chr21 40762623 + Exonic hg19 ESCA TCGA-2H-A9GL 4 Out-of-Frame Inter-chr q37.2 q22.2 3893 ChimerSeq FusionScan TCGA_RNA-Seq MYO9B-VPS13A MYO9B chr19 17213367 + VPS13A chr9 80018151 + Exonic hg19 ESCA TCGA-2H-A9GL 2 In-Frame Inter-chr p13.11 q21.2 3894 ChimerSeq FusionScan TCGA_RNA-Seq LHFPL2-HPSE LHFPL2 chr5 77860635 - HPSE chr4 84243517 - Exonic hg19 ESCA TCGA-2H-A9GL 2 5'UTR-CDS Inter-chr q14.1 q21.23 3895 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-CCDC138 RCC1 chr1 28834672 + CCDC138 chr2 109455640 + Exonic hg19 ESCA TCGA-2H-A9GL 2 5'UTR-CDS Inter-chr p35.3 q13 3896 ChimerSeq FusionScan TCGA_RNA-Seq TIMM17B-PQBP1 TIMM17B chrX 48755349 - PQBP1 chrX 48755212 + Exonic hg19 ESCA TCGA-2H-A9GL 2 5'UTR-5'UTR Intra-chr p11.23 p11.23 Seq+ 3897 ChimerSeq FusionScan TCGA_RNA-Seq RAB27A-RNGTT RAB27A chr15 55562362 - RNGTT chr6 89388138 - Exonic hg19 ESCA TCGA-2H-A9GL 2 5'UTR-CDS Inter-chr q21.3 q15 3898 ChimerSeq FusionScan TCGA_RNA-Seq CTDSPL2-UBR5 CTDSPL2 chr15 44751398 + UBR5 chr8 103358623 - Exonic hg19 ESCA TCGA-2H-A9GL 2 In-Frame Inter-chr q15.3 q22.3 Oncogene 3899 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 ESCA TCGA-2H-A9GL 2 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 3900 ChimerSeq FusionScan TCGA_RNA-Seq TPR-TGM2 TPR chr1 186300629 - TGM2 chr20 36768056 - Exonic hg19 ESCA TCGA-2H-A9GL 2 Out-of-Frame Inter-chr q31.1 Oncogene q11.23 3901 ChimerSeq FusionScan TCGA_RNA-Seq NUP62-ATF5 NUP62 chr19 50432582 - ATF5 chr19 50435678 + Exonic hg19 ESCA TCGA-2H-A9GL 2 5'UTR-CDS Intra-chr q13.33 q13.33 Transcription factor Seq+ 3902 ChimerSeq FusionScan TCGA_RNA-Seq LDB2-C4orf34 LDB2 chr4 16760780 - C4orf34 chr4 39606800 - Exonic hg19 ESCA TCGA-2H-A9GL 2 CDS-5'UTR Intra-chr p15.32 3903 ChimerSeq FusionScan TCGA_RNA-Seq KIF18B-C17orf104 KIF18B chr17 43010279 - C17orf104 chr17 42734494 + Exonic hg19 ESCA TCGA-VR-A8EY 3 In-Frame Intra-chr q21.31 Seq+ 3904 ChimerSeq FusionScan TCGA_RNA-Seq RAB38-SCAMP1 RAB38 chr11 87882842 - SCAMP1 chr5 77684660 + Exonic hg19 ESCA TCGA-VR-A8EY 2 Out-of-Frame Inter-chr q14.2 q14.1 3905 ChimerSeq FusionScan TCGA_RNA-Seq STRA13-ASPSCR1 STRA13 chr17 79980701 - ASPSCR1 chr17 79974351 + Exonic hg19 ESCA TCGA-VR-A8EY 2 In-Frame Intra-chr q25.3 3906 ChimerSeq FusionScan TCGA_RNA-Seq PGLYRP3-SPRR2G PGLYRP3 chr1 153283086 - SPRR2G chr1 153122607 - Exonic hg19 ESCA TCGA-VR-A8EY 2 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 3907 ChimerSeq FusionScan TCGA_RNA-Seq FARP1-DOCK9 FARP1 chr13 98865667 + DOCK9 chr13 99556960 - Exonic hg19 ESCA TCGA-VR-A8EY 2 In-Frame Intra-chr q32.2 q32.3 3908 ChimerSeq FusionScan TCGA_RNA-Seq ADH7-KDM1B ADH7 chr4 100348929 - KDM1B chr6 18212718 + Exonic hg19 ESCA TCGA-VR-A8EY 2 In-Frame Inter-chr q23 p22.3 3909 ChimerSeq FusionScan TCGA_RNA-Seq U2SURP-PAFAH1B2 U2SURP chr3 142720515 + PAFAH1B2 chr11 117023156 + Exonic hg19 ESCA TCGA-VR-A8EY 2 CDS-5'UTR Inter-chr q23 q23.3 3910 ChimerSeq FusionScan TCGA_RNA-Seq ZNF217-MAVS ZNF217 chr20 52188259 - MAVS chr20 3841978 + Exonic hg19 ESCA TCGA-IG-A50L 10 3'UTR-CDS Intra-chr q13.2 Oncogene Transcription factor p13 Seq+ 3911 ChimerSeq FusionScan TCGA_RNA-Seq CLASRP-GEMIN7 CLASRP chr19 45542366 + GEMIN7 chr19 45593364 + Exonic hg19 ESCA TCGA-IG-A50L 4 5'UTR-5'UTR Intra-chr q13.32 q13.32 3912 ChimerSeq FusionScan TCGA_RNA-Seq XPO1-TARS XPO1 chr2 61724013 - TARS chr5 33461262 + Exonic hg19 ESCA TCGA-IG-A50L 2 In-Frame Inter-chr p15 Oncogene p13.3 3913 ChimerSeq FusionScan TCGA_RNA-Seq ZNF217-MAVS ZNF217 chr20 52188259 - MAVS chr20 3842900 + Exonic hg19 ESCA TCGA-IG-A50L 2 3'UTR-CDS Intra-chr q13.2 Oncogene Transcription factor p13 Seq+ 3914 ChimerSeq FusionScan TCGA_RNA-Seq MIR181A2HG-DTNB MIR181A2HG chr9 127421020 + DTNB chr2 25851253 - Exonic hg19 ESCA TCGA-IG-A50L 2 5'UTR-5'UTR Inter-chr q33.3 p23.3 3915 ChimerSeq FusionScan TCGA_RNA-Seq HMG20B-CSAG2 HMG20B chr19 3573798 + CSAG2 chrX 151928358 + Exonic hg19 ESCA TCGA-IG-A50L 2 Out-of-Frame Inter-chr p13.3 Transcription factor q28 3916 ChimerSeq FusionScan TCGA_RNA-Seq TSPAN5-ADH5 TSPAN5 chr4 99428828 - ADH5 chr4 99998074 - Exonic hg19 ESCA TCGA-IG-A50L 2 Out-of-Frame Intra-chr q23 q23 3917 ChimerSeq FusionScan TCGA_RNA-Seq NFAT5-TRIP12 NFAT5 chr16 69600277 + TRIP12 chr2 230744844 - Exonic hg19 ESCA TCGA-IG-A50L 2 5'UTR-5'UTR Inter-chr q22.1 Transcription factor q36.3 3918 ChimerSeq FusionScan TCGA_RNA-Seq FBXW11-UIMC1 FBXW11 chr5 171433461 - UIMC1 chr5 176402481 - Exonic hg19 ESCA TCGA-IG-A50L 2 In-Frame Intra-chr q35.1 q35.2 Tumor suppressor gene 3919 ChimerSeq FusionScan TCGA_RNA-Seq CDIPT-SEZ6L2 CDIPT chr16 29871901 - SEZ6L2 chr16 29885050 - Exonic hg19 ESCA TCGA-LN-A8I0 5 Out-of-Frame Intra-chr p11.2 p11.2 Seq+ 3920 ChimerSeq FusionScan TCGA_RNA-Seq RBBP4-C16orf55 RBBP4 chr1 33123173 + C16orf55 chr16 89735693 + Exonic hg19 ESCA TCGA-LN-A8I0 2 In-Frame Inter-chr p35.1 3921 ChimerSeq FusionScan TCGA_RNA-Seq COL7A1-PLXNB1 COL7A1 chr3 48605006 - PLXNB1 chr3 48457168 - Exonic hg19 ESCA TCGA-LN-A8I0 2 Out-of-Frame Intra-chr p21.31 p21.31 3922 ChimerSeq FusionScan TCGA_RNA-Seq DSC3-ATG10 DSC3 chr18 28598036 - ATG10 chr5 81354313 + Exonic hg19 ESCA TCGA-LN-A8I0 2 In-Frame Inter-chr q12.1 Tumor suppressor gene q14.1 3923 ChimerSeq FusionScan TCGA_RNA-Seq SLC7A11-STIP1 SLC7A11 chr4 139162946 - STIP1 chr11 63961950 + Exonic hg19 ESCA TCGA-LN-A8I0 2 In-Frame Inter-chr q28.3 q13.1 3924 ChimerSeq FusionScan TCGA_RNA-Seq HK1-VPS26A HK1 chr10 71078766 + VPS26A chr10 70915567 + Exonic hg19 ESCA TCGA-LN-A8I0 2 In-Frame Intra-chr q22.1 q22.1 3925 ChimerSeq FusionScan TCGA_RNA-Seq ATP6V1A-ATG3 ATP6V1A chr3 113465960 + ATG3 chr3 112257027 - Exonic hg19 ESCA TCGA-LN-A8I0 2 5'UTR-CDS Intra-chr q13.31 q13.2 3926 ChimerSeq FusionScan TCGA_RNA-Seq AZIN1-YWHAZ AZIN1 chr8 103870240 - YWHAZ chr8 101932980 - Exonic hg19 ESCA TCGA-LN-A8I0 2 5'UTR-CDS Intra-chr q22.3 q22.3 3927 ChimerSeq FusionScan TCGA_RNA-Seq CYP4F11-FAM95B1 CYP4F11 chr19 16038021 - FAM95B1 chr9 42470479 + Exonic hg19 ESCA TCGA-LN-A8I0 2 CDS-5'UTR Inter-chr p13.12 p11.2 3928 ChimerSeq FusionScan TCGA_RNA-Seq CDIPT-SEZ6L2 CDIPT chr16 29871901 - SEZ6L2 chr16 29885050 - Exonic hg19 ESCA TCGA-LN-A8I0 2 Out-of-Frame Intra-chr p11.2 p11.2 Seq+ 3929 ChimerSeq FusionScan TCGA_RNA-Seq RBBP4-C16orf55 RBBP4 chr1 33123173 + C16orf55 chr16 89735693 + Exonic hg19 ESCA TCGA-LN-A8I0 2 In-Frame Inter-chr p35.1 3930 ChimerSeq FusionScan TCGA_RNA-Seq DSC3-ATG10 DSC3 chr18 28598036 - ATG10 chr5 81354313 + Exonic hg19 ESCA TCGA-LN-A8I0 2 In-Frame Inter-chr q12.1 Tumor suppressor gene q14.1 3931 ChimerSeq FusionScan TCGA_RNA-Seq LYN-SET LYN chr8 56792662 + SET chr9 131453448 + Exonic hg19 ESCA TCGA-LN-A8I0 2 5'UTR-CDS Inter-chr q12.1 TK:Src q34.11 3932 ChimerSeq FusionScan TCGA_RNA-Seq AZIN1-YWHAZ AZIN1 chr8 103870240 - YWHAZ chr8 101932980 - Exonic hg19 ESCA TCGA-LN-A8I0 2 5'UTR-CDS Intra-chr q22.3 q22.3 3933 ChimerSeq FusionScan TCGA_RNA-Seq ATP6V1A-ATG3 ATP6V1A chr3 113465960 + ATG3 chr3 112257027 - Exonic hg19 ESCA TCGA-LN-A8I0 2 5'UTR-CDS Intra-chr q13.31 q13.2 3934 ChimerSeq FusionScan TCGA_RNA-Seq IRF7-RCC1 IRF7 chr11 615344 - RCC1 chr1 28843236 + Exonic hg19 ESCA TCGA-2H-A9GJ 8 CDS-5'UTR Inter-chr Transcription factor p35.3 Seq+ 3935 ChimerSeq FusionScan TCGA_RNA-Seq DDAH2-SLC44A4 DDAH2 chr6 31697827 - SLC44A4 chr6 31833561 - Exonic hg19 ESCA TCGA-2H-A9GJ 7 5'UTR-5'UTR Intra-chr Seq+ 3936 ChimerSeq FusionScan TCGA_RNA-Seq KDM4A-MPL KDM4A chr1 44169783 + MPL chr1 43805634 + Exonic hg19 ESCA TCGA-2H-A9GJ 6 In-Frame Intra-chr p34.2 p34.2 Oncogene Seq+ 3937 ChimerSeq FusionScan TCGA_RNA-Seq IRF7-RCC1 IRF7 chr11 615344 - RCC1 chr1 28856369 + Exonic hg19 ESCA TCGA-2H-A9GJ 5 CDS-5'UTR Inter-chr Transcription factor p35.3 Seq+ 3938 ChimerSeq FusionScan TCGA_RNA-Seq ARL17B-KANSL1 ARL17B chr17 44430185 - KANSL1 chr17 44128070 - Exonic hg19 ESCA TCGA-2H-A9GJ 3 3'UTR-3'UTR Intra-chr 3939 ChimerSeq FusionScan TCGA_RNA-Seq KDM4A-MPL KDM4A chr1 44137546 + MPL chr1 43803769 + Exonic hg19 ESCA TCGA-2H-A9GJ 3 Out-of-Frame Intra-chr p34.2 p34.2 Oncogene Seq+ 3940 ChimerSeq FusionScan TCGA_RNA-Seq TPX2-RIF1 TPX2 chr20 30347982 + RIF1 chr2 152315324 + Exonic hg19 ESCA TCGA-2H-A9GJ 3 Out-of-Frame Inter-chr q11.21 q23.3 Seq+ 3941 ChimerSeq FusionScan TCGA_RNA-Seq PITPNM3-PELP1 PITPNM3 chr17 6428675 - PELP1 chr17 4594737 - Exonic hg19 ESCA TCGA-2H-A9GJ 2 Out-of-Frame Intra-chr p13.1 p13.2 Seq+ 3942 ChimerSeq FusionScan TCGA_RNA-Seq CDK13-C7orf10 CDK13 chr7 40102699 + C7orf10 chr7 40356358 + Exonic hg19 ESCA TCGA-2H-A9GJ 2 Out-of-Frame Intra-chr p14.1 Seq+ 3943 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 ESCA TCGA-2H-A9GJ 2 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 3944 ChimerSeq FusionScan TCGA_RNA-Seq BAZ2B-WDR96 BAZ2B chr2 160472752 - WDR96 chr10 105893542 - Exonic hg19 ESCA TCGA-IG-A5B8 7 5'UTR-CDS Inter-chr q24.2 Transcription factor Seq+ 3945 ChimerSeq FusionScan TCGA_RNA-Seq COL5A2-AP5Z1 COL5A2 chr2 189927735 - AP5Z1 chr7 4830303 + Exonic hg19 ESCA TCGA-IG-A5B8 2 In-Frame Inter-chr q32.2 p22.1 3946 ChimerSeq FusionScan TCGA_RNA-Seq SEMA4B-GLUD1 SEMA4B chr15 90744967 + GLUD1 chr10 88827914 - Exonic hg19 ESCA TCGA-IG-A5B8 2 In-Frame Inter-chr q26.1 q23.2 3947 ChimerSeq FusionScan TCGA_RNA-Seq ZNRF3-KREMEN1 ZNRF3 chr22 29383189 + KREMEN1 chr22 29490245 + Exonic hg19 ESCA TCGA-2H-A9GR 3 Out-of-Frame Intra-chr q12.1 q12.1 Seq+ 3948 ChimerSeq FusionScan TCGA_RNA-Seq TACC1-ADAM9 TACC1 chr8 38688695 + ADAM9 chr8 38865404 + Exonic hg19 ESCA TCGA-2H-A9GR 2 Out-of-Frame Intra-chr p11.22 Seq+ 3949 ChimerSeq FusionScan TCGA_RNA-Seq SKIL-LEPREL1 SKIL chr3 170079217 + LEPREL1 chr3 189713231 - Exonic hg19 ESCA TCGA-2H-A9GR 2 In-Frame Intra-chr q26.2 Tumor suppressor gene Transcription factor 3950 ChimerSeq FusionScan TCGA_RNA-Seq SOLH-DEFB105B SOLH chr16 583998 + DEFB105B chr8 7680945 - Exonic hg19 ESCA TCGA-2H-A9GR 2 5'UTR-CDS Inter-chr 3951 ChimerSeq FusionScan TCGA_RNA-Seq ATP7B-KLF5 ATP7B chr13 52585422 - KLF5 chr13 73635998 + Exonic hg19 ESCA TCGA-LN-A7HX 9 In-Frame Intra-chr q14.3 q22.1 Tumor suppressor gene Transcription factor Seq+ 3952 ChimerSeq FusionScan TCGA_RNA-Seq ATP2C1-NEK11 ATP2C1 chr3 130688240 + NEK11 chr3 131068400 + Exonic hg19 ESCA TCGA-LN-A7HX 5 Out-of-Frame Intra-chr q22.1 q22.1 Other:NEK Seq+ 3953 ChimerSeq FusionScan TCGA_RNA-Seq SRGAP2P2-RASSF5 SRGAP2P2 chr1 143916308 + RASSF5 chr1 206711500 + Exonic hg19 ESCA TCGA-LN-A7HX 3 5'UTR-CDS Intra-chr q32.1 Tumor suppressor gene 3954 ChimerSeq FusionScan TCGA_RNA-Seq ATP2C1-NEK11 ATP2C1 chr3 130686263 + NEK11 chr3 131068400 + Exonic hg19 ESCA TCGA-LN-A7HX 2 Out-of-Frame Intra-chr q22.1 q22.1 Other:NEK Seq+ 3955 ChimerSeq FusionScan TCGA_RNA-Seq PARP2-ABCD4 PARP2 chr14 20822406 + ABCD4 chr14 74755468 - Exonic hg19 ESCA TCGA-LN-A7HX 2 In-Frame Intra-chr q11.2 q24.3 3956 ChimerSeq FusionScan TCGA_RNA-Seq TMX2-CTNND1 TMX2 chr11 57505140 + CTNND1 chr11 57558856 + Exonic hg19 ESCA TCGA-LN-A7HX 2 5'UTR-5'UTR Intra-chr q12.1 q12.1 Tumor suppressor gene 3957 ChimerSeq FusionScan TCGA_RNA-Seq WDR44-DOCK11 WDR44 chrX 117544922 + DOCK11 chrX 117758501 + Exonic hg19 ESCA TCGA-VR-A8EW 3 In-Frame Intra-chr q24 q24 Seq+ 3958 ChimerSeq FusionScan TCGA_RNA-Seq KAT6A-SPPL2A KAT6A chr8 41832221 - SPPL2A chr15 51041943 - Exonic hg19 ESCA TCGA-VR-A8EW 3 In-Frame Inter-chr p11.21 Oncogene q21.2 3959 ChimerSeq FusionScan TCGA_RNA-Seq GTF3C3-COL5A2 GTF3C3 chr2 197645282 - COL5A2 chr2 189917528 - Exonic hg19 ESCA TCGA-VR-A8EW 3 In-Frame Intra-chr q33.1 q32.2 Seq+ 3960 ChimerSeq FusionScan TCGA_RNA-Seq PKP3-BAIAP2 PKP3 chr11 397662 + BAIAP2 chr17 79089569 + Exonic hg19 ESCA TCGA-VR-A8EW 2 Out-of-Frame Inter-chr p15.5 q25.3 3961 ChimerSeq FusionScan TCGA_RNA-Seq KLK9-CELA1 KLK9 chr19 51506959 - CELA1 chr12 51723617 - Exonic hg19 ESCA TCGA-VR-A8EW 2 In-Frame Inter-chr q13.41 q13.13 3962 ChimerSeq FusionScan TCGA_RNA-Seq NAMPT-CEP290 NAMPT chr7 105915391 - CEP290 chr12 88452797 - Exonic hg19 ESCA TCGA-VR-A8EW 2 In-Frame Inter-chr q22.3 q21.32 3963 ChimerSeq FusionScan TCGA_RNA-Seq PBX4-ZC3HAV1 PBX4 chr19 19710100 - ZC3HAV1 chr7 138774505 - Exonic hg19 ESCA TCGA-VR-A8EW 2 Out-of-Frame Inter-chr p13.11 Transcription factor q34 3964 ChimerSeq FusionScan TCGA_RNA-Seq RPL10-CST4 RPL10 chrX 153628282 + CST4 chr20 23666614 - Exonic hg19 ESCA TCGA-VR-A8EW 2 Out-of-Frame Inter-chr q28 Tumor suppressor gene p11.21 3965 ChimerSeq FusionScan TCGA_RNA-Seq NQO1-COA5 NQO1 chr16 69752025 - COA5 chr2 99217256 - Exonic hg19 ESCA TCGA-VR-A8EW 2 In-Frame Inter-chr q22.1 q11.2 3966 ChimerSeq FusionScan TCGA_RNA-Seq ETV6-PSPC1 ETV6 chr12 11803094 + PSPC1 chr13 20251963 - Exonic hg19 ESCA TCGA-VR-A8EW 2 CDS-3'UTR Inter-chr p13.2 Tumor suppressor gene Transcription factor q12.11 3967 ChimerSeq FusionScan TCGA_RNA-Seq FBXL8-SLC35E2B FBXL8 chr16 67193959 + SLC35E2B chr1 1608285 - Exonic hg19 ESCA TCGA-VR-A8EW 2 5'UTR-5'UTR Inter-chr q22.1 p36.33 3968 ChimerSeq FusionScan TCGA_RNA-Seq DHX9-XPR1 DHX9 chr1 182829319 + XPR1 chr1 180651495 + Exonic hg19 ESCA TCGA-VR-A8EW 2 In-Frame Intra-chr q25.3 q25.3 3969 ChimerSeq FusionScan TCGA_RNA-Seq MB21D1-BTRC MB21D1 chr6 74161247 - BTRC chr10 103281395 + Exonic hg19 ESCA TCGA-VR-A8EW 2 In-Frame Inter-chr q13 q24.32 3970 ChimerSeq FusionScan TCGA_RNA-Seq RBM47-NAB1 RBM47 chr4 40631412 - NAB1 chr2 191520702 + Exonic hg19 ESCA TCGA-VR-A8EW 2 5'UTR-5'UTR Inter-chr p14 q32.2 3971 ChimerSeq FusionScan TCGA_RNA-Seq ABL1-NTRK2 ABL1 chr9 133710912 + NTRK2 chr9 87338487 + Exonic hg19 ESCA TCGA-VR-A8EW 2 In-Frame Intra-chr q34.12 TK:Abl Oncogene q21.33 Oncogene 3972 ChimerSeq FusionScan TCGA_RNA-Seq PGLYRP3-SPRR2G PGLYRP3 chr1 153274884 - SPRR2G chr1 153122607 - Exonic hg19 ESCA TCGA-VR-A8EW 2 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 3973 ChimerSeq FusionScan TCGA_RNA-Seq WIPF2-CD99 WIPF2 chr17 38375744 + CD99 chrY 2591354 + Exonic hg19 ESCA TCGA-VR-A8EW 2 5'UTR-CDS Inter-chr q21.2 p22.33 Seq+ 3974 ChimerSeq FusionScan TCGA_RNA-Seq TACC1-ADAM9 TACC1 chr8 38688695 + ADAM9 chr8 38865404 + Exonic hg19 ESCA TCGA-2H-A9GR 3 Out-of-Frame Intra-chr p11.22 Seq+ 3975 ChimerSeq FusionScan TCGA_RNA-Seq ZNRF3-KREMEN1 ZNRF3 chr22 29383189 + KREMEN1 chr22 29490245 + Exonic hg19 ESCA TCGA-2H-A9GR 3 Out-of-Frame Intra-chr q12.1 q12.1 Seq+ 3976 ChimerSeq FusionScan TCGA_RNA-Seq FUT8-CDK12 FUT8 chr14 65922436 + CDK12 chr17 37627131 + Exonic hg19 ESCA TCGA-2H-A9GR 2 5'UTR-CDS Inter-chr q23.3 q12 Oncogene 3977 ChimerSeq FusionScan TCGA_RNA-Seq SKIL-LEPREL1 SKIL chr3 170079217 + LEPREL1 chr3 189713231 - Exonic hg19 ESCA TCGA-2H-A9GR 2 In-Frame Intra-chr q26.2 Tumor suppressor gene Transcription factor 3978 ChimerSeq FusionScan TCGA_RNA-Seq VCPIP1-C8orf44 VCPIP1 chr8 67576483 - C8orf44 chr8 67589876 + Exonic hg19 ESCA TCGA-2H-A9GR 2 CDS-5'UTR Intra-chr q13.1 q13.1 3979 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 ESCA TCGA-2H-A9GR 2 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 3980 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R4-PRRX2 PPP2R4 chr9 131898874 + PRRX2 chr9 132481509 + Exonic hg19 ESCA TCGA-2H-A9GR 2 In-Frame Intra-chr Tumor suppressor gene q34.11 Transcription factor 3981 ChimerSeq FusionScan TCGA_RNA-Seq PUM1-YARS PUM1 chr1 31532050 - YARS chr1 33276658 - Exonic hg19 ESCA TCGA-JY-A6FH 31 In-Frame Intra-chr p35.2 p35.1 Seq+ 3982 ChimerSeq FusionScan TCGA_RNA-Seq U2AF2-KIR3DL2 U2AF2 chr19 56170711 + KIR3DL2 chr19 55363452 + Exonic hg19 ESCA TCGA-JY-A6FH 28 Out-of-Frame Intra-chr q13.42 Seq+ 3983 ChimerSeq FusionScan TCGA_RNA-Seq U2AF2-KIR3DL1 U2AF2 chr19 56170711 + KIR3DL1 chr19 55329769 + Exonic hg19 ESCA TCGA-JY-A6FH 21 Out-of-Frame Intra-chr q13.42 Seq+ 3984 ChimerSeq FusionScan TCGA_RNA-Seq TAX1BP1-CHN2 TAX1BP1 chr7 27827222 + CHN2 chr7 29394240 + Exonic hg19 ESCA TCGA-JY-A6FH 15 Out-of-Frame Intra-chr p15.2 p14.3 Seq+ 3985 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R13B-L2HGDH PPP1R13B chr14 104313635 - L2HGDH chr14 50750751 - Exonic hg19 ESCA TCGA-JY-A6FH 14 In-Frame Intra-chr q32.33 q21.3 Seq+ 3986 ChimerSeq FusionScan TCGA_RNA-Seq DRAM1-SYCP3 DRAM1 chr12 102271698 + SYCP3 chr12 102128822 - Exonic hg19 ESCA TCGA-JY-A6FH 13 Out-of-Frame Intra-chr q23.2 q23.2 Seq+ 3987 ChimerSeq FusionScan TCGA_RNA-Seq CYB561D2-SLC38A3 CYB561D2 chr3 50388991 + SLC38A3 chr3 50251581 + Exonic hg19 ESCA TCGA-JY-A6FH 11 CDS-5'UTR Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 3988 ChimerSeq FusionScan TCGA_RNA-Seq CYB561D2-SLC38A3 CYB561D2 chr3 50389477 + SLC38A3 chr3 50251581 + Exonic hg19 ESCA TCGA-JY-A6FH 10 CDS-5'UTR Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 3989 ChimerSeq FusionScan TCGA_RNA-Seq URI1-PDCD5 URI1 chr19 30462134 + PDCD5 chr19 33073100 + Exonic hg19 ESCA TCGA-JY-A6FH 10 Out-of-Frame Intra-chr q12 q13.11 Tumor suppressor gene Seq+ 3990 ChimerSeq FusionScan TCGA_RNA-Seq IQGAP1-NGRN IQGAP1 chr15 90934105 + NGRN chr15 90814419 + Exonic hg19 ESCA TCGA-JY-A6FH 9 In-Frame Intra-chr q26.1 q26.1 Seq+ 3991 ChimerSeq FusionScan TCGA_RNA-Seq URI1-PDCD5 URI1 chr19 30433571 + PDCD5 chr19 33073100 + Exonic hg19 ESCA TCGA-JY-A6FH 9 In-Frame Intra-chr q12 q13.11 Tumor suppressor gene Seq+ 3992 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHG5-KHDRBS1 PLEKHG5 chr1 6579504 - KHDRBS1 chr1 32495898 + Exonic hg19 ESCA TCGA-JY-A6FH 8 In-Frame Intra-chr p36.31 Oncogene p35.2 Seq+ 3993 ChimerSeq FusionScan TCGA_RNA-Seq COBRA1-FBXW5 COBRA1 chr9 140161798 + FBXW5 chr9 139836136 - Exonic hg19 ESCA TCGA-JY-A6FH 8 In-Frame Intra-chr q34.3 Seq+ 3994 ChimerSeq FusionScan TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105561039 - OBFC1 chr10 105677414 - Exonic hg19 ESCA TCGA-JY-A6FH 8 CDS-5'UTR Intra-chr q24.33 Seq+ 3995 ChimerSeq FusionScan TCGA_RNA-Seq SLC16A9-CCDC6 SLC16A9 chr10 61469236 - CCDC6 chr10 61552869 - Exonic hg19 ESCA TCGA-JY-A6FH 7 5'UTR-CDS Intra-chr q21.2 q21.2 Seq+ 3996 ChimerSeq FusionScan TCGA_RNA-Seq CRHR1-KANSL1 CRHR1 chr17 43699407 + KANSL1 chr17 44172067 - Exonic hg19 ESCA TCGA-JY-A6FH 5 5'UTR-CDS Intra-chr q21.31 Pub 3997 ChimerSeq FusionScan TCGA_RNA-Seq TYW1-DMTF1 TYW1 chr7 66582605 + DMTF1 chr7 86795798 + Exonic hg19 ESCA TCGA-JY-A6FH 5 Out-of-Frame Intra-chr q11.21 q21.12 Tumor suppressor gene Transcription factor Seq+ 3998 ChimerSeq FusionScan TCGA_RNA-Seq RERE-GNB1 RERE chr1 8716031 - GNB1 chr1 1770677 - Exonic hg19 ESCA TCGA-JY-A6FH 5 CDS-5'UTR Intra-chr p36.23 p36.33 3999 ChimerSeq FusionScan TCGA_RNA-Seq SMARCA4-SLC44A2 SMARCA4 chr19 11107220 + SLC44A2 chr19 10745431 + Exonic hg19 ESCA TCGA-JY-A6FH 5 Out-of-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 4000 ChimerSeq FusionScan TCGA_RNA-Seq AFAP1L2-GLUD1 AFAP1L2 chr10 116164198 - GLUD1 chr10 88835780 - Exonic hg19 ESCA TCGA-JY-A6FH 5 In-Frame Intra-chr q25.3 Tumor suppressor gene q23.2 4001 ChimerSeq FusionScan TCGA_RNA-Seq DNM2-ULK3 DNM2 chr19 10829079 + ULK3 chr15 75134761 - Exonic hg19 ESCA TCGA-JY-A6FH 3 Out-of-Frame Inter-chr p13.2 q24.1 Other:ULK 4002 ChimerSeq FusionScan TCGA_RNA-Seq ITGA7-RNF41 ITGA7 chr12 56091478 - RNF41 chr12 56610397 - Exonic hg19 ESCA TCGA-JY-A6FH 3 CDS-5'UTR Intra-chr q13.2 Tumor suppressor gene q13.3 4003 ChimerSeq FusionScan TCGA_RNA-Seq ACTN4-MAP4K1 ACTN4 chr19 39138547 + MAP4K1 chr19 39108265 - Exonic hg19 ESCA TCGA-JY-A6FH 3 In-Frame Intra-chr Tumor suppressor gene 4004 ChimerSeq FusionScan TCGA_RNA-Seq YARS-ZMYND8 YARS chr1 33252540 - ZMYND8 chr20 45976670 - Exonic hg19 ESCA TCGA-JY-A6FH 2 Out-of-Frame Inter-chr p35.1 q13.12 4005 ChimerSeq FusionScan TCGA_RNA-Seq INPP5D-C2orf82 INPP5D chr2 233944108 + C2orf82 chr2 233734993 + Exonic hg19 ESCA TCGA-JY-A6FH 2 CDS-5'UTR Intra-chr q37.1 4006 ChimerSeq FusionScan TCGA_RNA-Seq GNA12-ITSN1 GNA12 chr7 2883486 - ITSN1 chr21 35091101 + Exonic hg19 ESCA TCGA-JY-A6FH 2 CDS-5'UTR Inter-chr p22.2 q22.11 4007 ChimerSeq FusionScan TCGA_RNA-Seq CDKAL1-E2F3 CDKAL1 chr6 20739846 + E2F3 chr6 20488343 + Exonic hg19 ESCA TCGA-JY-A6FH 2 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Transcription factor Seq+ 4008 ChimerSeq FusionScan TCGA_RNA-Seq C10orf76-LDB1 C10orf76 chr10 103699619 - LDB1 chr10 103871293 - Exonic hg19 ESCA TCGA-JY-A6FH 2 Out-of-Frame Intra-chr q24.32 q24.32 Seq+ 4009 ChimerSeq FusionScan TCGA_RNA-Seq BMPR2-PARD3B BMPR2 chr2 203242273 + PARD3B chr2 206110501 + Exonic hg19 ESCA TCGA-JY-A6FH 2 3'UTR-CDS Intra-chr q33.1 TKL:STKR Tumor suppressor gene q33.3 4010 ChimerSeq FusionScan TCGA_RNA-Seq CHN2-CREB5 CHN2 chr7 29407603 + CREB5 chr7 28758369 + Exonic hg19 ESCA TCGA-JY-A6FH 2 Out-of-Frame Intra-chr p14.3 p15.1 Transcription factor 4011 ChimerSeq FusionScan TCGA_RNA-Seq DIS3L2-SPATA3 DIS3L2 chr2 233075115 + SPATA3 chr2 231865080 + Exonic hg19 ESCA TCGA-JY-A6FH 2 In-Frame Intra-chr q37.1 q37.1 4012 ChimerSeq FusionScan TCGA_RNA-Seq CLEC16A-ATF7IP2 CLEC16A chr16 11220003 + ATF7IP2 chr16 10565966 + Exonic hg19 ESCA TCGA-JY-A6FH 2 Out-of-Frame Intra-chr p13.13 p13.2 Seq+ 4013 ChimerSeq FusionScan TCGA_RNA-Seq CES4A-ACHE CES4A chr16 67040720 + ACHE chr7 100488959 - Exonic hg19 ESCA TCGA-L5-A4OE 3 In-Frame Inter-chr q22.1 q22.1 Tumor suppressor gene 4014 ChimerSeq FusionScan TCGA_RNA-Seq SYMPK-MUM1 SYMPK chr19 46324641 - MUM1 chr19 1356322 + Exonic hg19 ESCA TCGA-L5-A4OE 2 CDS-5'UTR Intra-chr q13.32 p13.3 Tumor suppressor gene 4015 ChimerSeq FusionScan TCGA_RNA-Seq SEMA7A-WIPI2 SEMA7A chr15 74726081 - WIPI2 chr7 5267734 + Exonic hg19 ESCA TCGA-L5-A4OE 2 Out-of-Frame Inter-chr q24.1 p22.1 4016 ChimerSeq FusionScan TCGA_RNA-Seq PTPRC-HNRPLL PTPRC chr1 198661502 + HNRPLL chr2 38818790 - Exonic hg19 ESCA TCGA-L5-A4OE 2 Out-of-Frame Inter-chr Tumor suppressor gene 4017 ChimerSeq FusionScan TCGA_RNA-Seq EIF2S1-GPHN EIF2S1 chr14 67827173 + GPHN chr14 67576856 + Exonic hg19 ESCA TCGA-LN-A5U5 16 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 4018 ChimerSeq FusionScan TCGA_RNA-Seq DMXL1-TNFAIP8 DMXL1 chr5 118452031 + TNFAIP8 chr5 118728510 + Exonic hg19 ESCA TCGA-LN-A5U5 5 Out-of-Frame Intra-chr q23.1 q23.1 Seq+ 4019 ChimerSeq FusionScan TCGA_RNA-Seq CEP170-RAD51B CEP170 chr1 243349080 - RAD51B chr14 68758600 + Exonic hg19 ESCA TCGA-LN-A5U5 2 In-Frame Inter-chr q24.1 4020 ChimerSeq FusionScan TCGA_RNA-Seq PARD3B-MYO1B PARD3B chr2 205551005 + MYO1B chr2 192275791 + Exonic hg19 ESCA TCGA-LN-A5U5 2 In-Frame Intra-chr q33.3 q32.3 4021 ChimerSeq FusionScan TCGA_RNA-Seq ACLY-WEE1 ACLY chr17 40030063 - WEE1 chr11 9609995 + Exonic hg19 ESCA TCGA-LN-A5U5 2 In-Frame Inter-chr q21.2 p15.4 Seq+ 4022 ChimerSeq FusionScan TCGA_RNA-Seq NOS2-MYO18A NOS2 chr17 26125725 - MYO18A chr17 27449271 - Exonic hg19 ESCA TCGA-L5-A4OH 4 Out-of-Frame Intra-chr q11.2 q11.2 Oncogene Seq+ 4023 ChimerSeq FusionScan TCGA_RNA-Seq SPOP-ITGB3 SPOP chr17 47755294 - ITGB3 chr17 45351784 + Exonic hg19 ESCA TCGA-L5-A4OH 2 5'UTR-CDS Intra-chr q21.33 Oncogene Tumor suppressor gene q21.32 Oncogene Tumor suppressor gene 4024 ChimerSeq FusionScan TCGA_RNA-Seq PTPN14-APLP2 PTPN14 chr1 214585026 - APLP2 chr11 129996594 + Exonic hg19 ESCA TCGA-L5-A4OH 2 Out-of-Frame Inter-chr q41 q24.3 4025 ChimerSeq FusionScan TCGA_RNA-Seq FUS-IL9R FUS chr16 31193985 + IL9R chrY 59337090 + Exonic hg19 ESCA TCGA-IG-A51D 6 In-Frame Inter-chr p11.2 Tumor suppressor gene q28 Seq+ 4026 ChimerSeq FusionScan TCGA_RNA-Seq ZMAT3-HAUS1 ZMAT3 chr3 178789114 - HAUS1 chr18 43698146 + Exonic hg19 ESCA TCGA-IG-A51D 2 5'UTR-5'UTR Inter-chr q26.32 q21.1 4027 ChimerSeq FusionScan TCGA_RNA-Seq PHKB-VRK2 PHKB chr16 47531399 + VRK2 chr2 58313473 + Exonic hg19 ESCA TCGA-IG-A51D 2 In-Frame Inter-chr q12.1 p16.1 CK1:VRK 4028 ChimerSeq FusionScan TCGA_RNA-Seq PFKM-ZDHHC13 PFKM chr12 48534654 + ZDHHC13 chr11 19186598 + Exonic hg19 ESCA TCGA-IG-A51D 2 In-Frame Inter-chr q13.11 p15.1 4029 ChimerSeq FusionScan TCGA_RNA-Seq HIVEP3-LRP8 HIVEP3 chr1 42041214 - LRP8 chr1 53792664 - Exonic hg19 ESCA TCGA-IG-A51D 2 Out-of-Frame Intra-chr p34.2 Tumor suppressor gene Transcription factor p32.3 4030 ChimerSeq FusionScan TCGA_RNA-Seq NCK1-IL20RB NCK1 chr3 136647069 + IL20RB chr3 136699307 + Exonic hg19 ESCA TCGA-IG-A51D 2 In-Frame Intra-chr q22.3 q22.3 Seq+ 4031 ChimerSeq FusionScan TCGA_RNA-Seq EFR3A-KCNQ3 EFR3A chr8 132916569 + KCNQ3 chr8 133198428 - Exonic hg19 ESCA TCGA-IG-A51D 2 Out-of-Frame Intra-chr q24.22 q24.22 4032 ChimerSeq FusionScan TCGA_RNA-Seq ITCH-DYNLRB1 ITCH chr20 33059320 + DYNLRB1 chr20 33114072 + Exonic hg19 ESCA TCGA-2H-A9GK 10 In-Frame Intra-chr q11.22 q11.22 Seq+ 4033 ChimerSeq FusionScan TCGA_RNA-Seq GNB1-SSU72 GNB1 chr1 1770628 - SSU72 chr1 1500296 - Exonic hg19 ESCA TCGA-LN-A4A1 17 5'UTR-CDS Intra-chr p36.33 p36.33 Seq+ 4034 ChimerSeq FusionScan TCGA_RNA-Seq GNB1-SSU72 GNB1 chr1 1822258 - SSU72 chr1 1500296 - Exonic hg19 ESCA TCGA-LN-A4A1 6 5'UTR-CDS Intra-chr p36.33 p36.33 Seq+ 4035 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R13B-XRCC3 PPP1R13B chr14 104313635 - XRCC3 chr14 104169664 - Exonic hg19 ESCA TCGA-LN-A4A1 5 Out-of-Frame Intra-chr q32.33 q32.33 Seq+ 4036 ChimerSeq FusionScan TCGA_RNA-Seq SOS2-CHD8 SOS2 chr14 50612194 - CHD8 chr14 21854335 - Exonic hg19 ESCA TCGA-LN-A4A1 3 Out-of-Frame Intra-chr q21.3 q11.2 4037 ChimerSeq FusionScan TCGA_RNA-Seq ENOPH1-CCNI ENOPH1 chr4 83352066 + CCNI chr4 77969815 - Exonic hg19 ESCA TCGA-LN-A4A1 2 In-Frame Intra-chr q21.22 q21.1 4038 ChimerSeq FusionScan TCGA_RNA-Seq SMARCAD1-GRID2 SMARCAD1 chr4 95174158 + GRID2 chr4 94128554 + Exonic hg19 ESCA TCGA-LN-A4A1 2 In-Frame Intra-chr q22.3 q22.1 Seq+ 4039 ChimerSeq FusionScan TCGA_RNA-Seq ZFAND3-PERP ZFAND3 chr6 37787792 + PERP chr6 138417631 - Exonic hg19 ESCA TCGA-LN-A4A1 2 Out-of-Frame Intra-chr p21.2 q23.3 4040 ChimerSeq FusionScan TCGA_RNA-Seq ATP9B-ZNF521 ATP9B chr18 76903860 + ZNF521 chr18 22672045 - Exonic hg19 ESCA TCGA-2H-A9GM 3 Out-of-Frame Intra-chr q11.2 Oncogene Transcription factor 4041 ChimerSeq FusionScan TCGA_RNA-Seq CTCF-IGJ CTCF chr16 67605167 + IGJ chr4 71527932 - Exonic hg19 ESCA TCGA-2H-A9GM 2 5'UTR-CDS Inter-chr q22.1 Tumor suppressor gene Transcription factor 4042 ChimerSeq FusionScan TCGA_RNA-Seq HS2ST1-FNBP1L HS2ST1 chr1 87380843 + FNBP1L chr1 93965024 + Exonic hg19 ESCA TCGA-2H-A9GM 2 Out-of-Frame Intra-chr p22.3 p22.1 4043 ChimerSeq FusionScan TCGA_RNA-Seq PPM1G-IFT172 PPM1G chr2 27632169 - IFT172 chr2 27667972 - Exonic hg19 ESCA TCGA-VR-A8EZ 4 Out-of-Frame Intra-chr p23.3 p23.3 Seq+ 4044 ChimerSeq FusionScan TCGA_RNA-Seq WDFY3-BRAF WDFY3 chr4 85853422 - BRAF chr7 140449218 - Exonic hg19 ESCA TCGA-VR-A8EZ 3 5'UTR-CDS Inter-chr q21.23 q34 TKL:RAF Oncogene 4045 ChimerSeq FusionScan TCGA_RNA-Seq CYP4F11-FAM95B1 CYP4F11 chr19 16038021 - FAM95B1 chr9 42470479 + Exonic hg19 ESCA TCGA-VR-A8EZ 3 CDS-5'UTR Inter-chr p13.12 p11.2 4046 ChimerSeq FusionScan TCGA_RNA-Seq PGLYRP3-SPRR2G PGLYRP3 chr1 153271588 - SPRR2G chr1 153122607 - Exonic hg19 ESCA TCGA-VR-A8EZ 2 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 4047 ChimerSeq FusionScan TCGA_RNA-Seq PPM1G-IFT172 PPM1G chr2 27632169 - IFT172 chr2 27667388 - Exonic hg19 ESCA TCGA-VR-A8EZ 2 In-Frame Intra-chr p23.3 p23.3 Seq+ 4048 ChimerSeq FusionScan TCGA_RNA-Seq APPL1-ASB14 APPL1 chr3 57291079 + ASB14 chr3 57303646 - Exonic hg19 ESCA TCGA-VR-A8EZ 2 CDS-3'UTR Intra-chr p14.3 p14.3 4049 ChimerSeq FusionScan TCGA_RNA-Seq DIAPH2-TAF15 DIAPH2 chrX 96639043 + TAF15 chr17 34160910 + Exonic hg19 ESCA TCGA-VR-A8EZ 2 Out-of-Frame Inter-chr q21.33 q12 4050 ChimerSeq FusionScan TCGA_RNA-Seq BBS9-FKBP9 BBS9 chr7 33427756 + FKBP9 chr7 33035774 + Exonic hg19 ESCA TCGA-VR-A8EZ 2 Out-of-Frame Intra-chr p14.3 p14.3 4051 ChimerSeq FusionScan TCGA_RNA-Seq NUP62-ATF5 NUP62 chr19 50432582 - ATF5 chr19 50435678 + Exonic hg19 ESCA TCGA-VR-A8EZ 2 5'UTR-CDS Intra-chr q13.33 q13.33 Transcription factor Seq+ 4052 ChimerSeq FusionScan TCGA_RNA-Seq ZNF43-NCOR1 ZNF43 chr19 22034706 - NCOR1 chr17 16012226 - Exonic hg19 ESCA TCGA-L5-A893 2 In-Frame Inter-chr p12 Transcription factor p11.2 Oncogene 4053 ChimerSeq FusionScan TCGA_RNA-Seq CAPZA1-C1QBP CAPZA1 chr1 113162505 + C1QBP chr17 5338286 - Exonic hg19 ESCA TCGA-L5-A893 2 Out-of-Frame Inter-chr p13.2 p13.2 4054 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 ESCA TCGA-L5-A893 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 4055 ChimerSeq FusionScan TCGA_RNA-Seq POGLUT1-FAM116A POGLUT1 chr3 119204234 + FAM116A chr3 57631483 - Exonic hg19 ESCA TCGA-L5-A893 2 In-Frame Intra-chr q13.33 4056 ChimerSeq FusionScan TCGA_RNA-Seq ZNF420-DPF1 ZNF420 chr19 37582023 + DPF1 chr19 38704396 - Exonic hg19 ESCA TCGA-XP-A8T6 3 In-Frame Intra-chr q13.12 Transcription factor q13.2 Transcription factor Seq+ 4057 ChimerSeq FusionScan TCGA_RNA-Seq ACTR3C-AUH ACTR3C chr7 149981841 - AUH chr9 94087686 - Exonic hg19 ESCA TCGA-XP-A8T6 2 Out-of-Frame Inter-chr q36.1 q22.31 4058 ChimerSeq FusionScan TCGA_RNA-Seq ACER3-FCHSD2 ACER3 chr11 76572123 + FCHSD2 chr11 72613683 - Exonic hg19 ESCA TCGA-XP-A8T6 2 Out-of-Frame Intra-chr q13.5 q13.4 4059 ChimerSeq FusionScan TCGA_RNA-Seq ACLY-NEUROD2 ACLY chr17 40039374 - NEUROD2 chr17 37762857 - Exonic hg19 ESCA TCGA-VR-AA4D 8 CDS-5'UTR Intra-chr q21.2 q12 Transcription factor Seq+ 4060 ChimerSeq FusionScan TCGA_RNA-Seq ACAA2-MYO5B ACAA2 chr18 47339838 - MYO5B chr18 47380017 - Exonic hg19 ESCA TCGA-VR-AA4D 4 Out-of-Frame Intra-chr q21.1 q21.1 Seq+ 4061 ChimerSeq FusionScan TCGA_RNA-Seq USP14-DDB2 USP14 chr18 166819 + DDB2 chr11 47259387 + Exonic hg19 ESCA TCGA-VR-AA4D 2 In-Frame Inter-chr p11.32 p11.2 Oncogene Tumor suppressor gene 4062 ChimerSeq FusionScan TCGA_RNA-Seq ANKS3-SEPT12 ANKS3 chr16 4774750 - SEPT12 chr16 4829787 - Exonic hg19 ESCA TCGA-S8-A6BW 9 In-Frame Intra-chr p13.3 p13.3 Seq+ 4063 ChimerSeq FusionScan TCGA_RNA-Seq COBLL1-PSMD14 COBLL1 chr2 165697665 - PSMD14 chr2 162223988 + Exonic hg19 ESCA TCGA-S8-A6BW 2 Out-of-Frame Intra-chr q24.3 q24.2 4064 ChimerSeq FusionScan TCGA_RNA-Seq LARP4B-WDR37 LARP4B chr10 875324 - WDR37 chr10 1170157 + Exonic hg19 ESCA TCGA-LN-A4A8 2 Out-of-Frame Intra-chr p15.3 p15.3 4065 ChimerSeq FusionScan TCGA_RNA-Seq DLG1-ACAP2 DLG1 chr3 196921295 - ACAP2 chr3 195066046 - Exonic hg19 ESCA TCGA-LN-A4A8 2 In-Frame Intra-chr q29 Tumor suppressor gene q29 4066 ChimerSeq FusionScan TCGA_RNA-Seq AAK1-NOP58 AAK1 chr2 69732700 - NOP58 chr2 203160396 + Exonic hg19 ESCA TCGA-LN-A4A8 2 In-Frame Intra-chr p13.3 Other:NAK q33.1 4067 ChimerSeq FusionScan TCGA_RNA-Seq CLK3-CTR9 CLK3 chr15 74900767 + CTR9 chr11 10777224 + Exonic hg19 ESCA TCGA-LN-A4A8 2 5'UTR-CDS Inter-chr q24.1 CMGC:CLK p15.4 4068 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992064 + VMP1 chr17 57808781 + Exonic hg19 ESCA TCGA-LN-A4A8 2 CDS-5'UTR Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 4069 ChimerSeq FusionScan TCGA_RNA-Seq FUBP3-ABL1 FUBP3 chr9 133455151 + ABL1 chr9 133738149 + Exonic hg19 ESCA TCGA-LN-A4A8 2 In-Frame Intra-chr q34.11 q34.12 TK:Abl Oncogene 4070 ChimerSeq FusionScan TCGA_RNA-Seq DSP-LY86 DSP chr6 7542318 + LY86 chr6 6649857 + Exonic hg19 ESCA TCGA-JY-A6FD 80 Out-of-Frame Intra-chr p24.3 Tumor suppressor gene p25.1 Seq+ 4071 ChimerSeq FusionScan TCGA_RNA-Seq NOV-ENPP2 NOV chr8 120431585 + ENPP2 chr8 120606100 - Exonic hg19 ESCA TCGA-JY-A6FD 38 In-Frame Intra-chr q24.12 Tumor suppressor gene q24.12 Seq+ 4072 ChimerSeq FusionScan TCGA_RNA-Seq MLL2-ARF3 MLL2 chr12 49443464 - ARF3 chr12 49334971 - Exonic hg19 ESCA TCGA-JY-A6FD 18 CDS-5'UTR Intra-chr q13.12 4073 ChimerSeq FusionScan TCGA_RNA-Seq DSP-LY86 DSP chr6 7542318 + LY86 chr6 6654776 + Exonic hg19 ESCA TCGA-JY-A6FD 16 Out-of-Frame Intra-chr p24.3 Tumor suppressor gene p25.1 Seq+ 4074 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R2A-ATCAY PPP2R2A chr8 26151256 + ATCAY chr19 3913755 + Exonic hg19 ESCA TCGA-JY-A6FD 10 Out-of-Frame Inter-chr p21.2 p13.3 Seq+ 4075 ChimerSeq FusionScan TCGA_RNA-Seq NUP62-DYRK1B NUP62 chr19 50430950 - DYRK1B chr19 40322608 - Exonic hg19 ESCA TCGA-JY-A6FD 3 5'UTR-5'UTR Intra-chr q13.33 CMGC:DYRK Seq+ 4076 ChimerSeq FusionScan TCGA_RNA-Seq ATP2C1-NEK11 ATP2C1 chr3 130613181 + NEK11 chr3 130871231 + Exonic hg19 ESCA TCGA-JY-A6FD 3 5'UTR-CDS Intra-chr q22.1 q22.1 Other:NEK Seq+ 4077 ChimerSeq FusionScan TCGA_RNA-Seq PTPN13-AFF1 PTPN13 chr4 87556524 + AFF1 chr4 87869649 + Exonic hg19 ESCA TCGA-JY-A6FD 3 CDS-5'UTR Intra-chr q21.3 Tumor suppressor gene q21.3 Oncogene Seq+ 4078 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R37-RTN2 PPP1R37 chr19 45646891 + RTN2 chr19 45989371 - Exonic hg19 ESCA TCGA-JY-A6FD 3 In-Frame Intra-chr q13.32 q13.32 Seq+ 4079 ChimerSeq FusionScan TCGA_RNA-Seq MINA-BCL2L13 MINA chr3 97680432 - BCL2L13 chr22 18209442 + Exonic hg19 ESCA TCGA-JY-A6FD 2 In-Frame Inter-chr q11.21 4080 ChimerSeq FusionScan TCGA_RNA-Seq QSOX1-LHX4 QSOX1 chr1 180165734 + LHX4 chr1 180217419 + Exonic hg19 ESCA TCGA-JY-A6FD 2 Out-of-Frame Intra-chr q25.2 q25.2 Tumor suppressor gene Transcription factor Seq+ 4081 ChimerSeq FusionScan TCGA_RNA-Seq BCAR3-TMED5 BCAR3 chr1 94107859 - TMED5 chr1 93625783 - Exonic hg19 ESCA TCGA-JY-A6FD 2 In-Frame Intra-chr p22.1 p22.1 4082 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R37-RTN2 PPP1R37 chr19 45645716 + RTN2 chr19 45989371 - Exonic hg19 ESCA TCGA-JY-A6FD 2 Out-of-Frame Intra-chr q13.32 q13.32 Seq+ 4083 ChimerSeq FusionScan TCGA_RNA-Seq ATP10D-GNAS ATP10D chr4 47514847 + GNAS chr20 57470666 + Exonic hg19 ESCA TCGA-JY-A6FD 2 Out-of-Frame Inter-chr p12 q13.32 Oncogene 4084 ChimerSeq FusionScan TCGA_RNA-Seq TMEM91-PHLDB1 TMEM91 chr19 41884424 + PHLDB1 chr11 118501923 + Exonic hg19 ESCA TCGA-JY-A6FD 2 In-Frame Inter-chr q13.2 q23.3 4085 ChimerSeq FusionScan TCGA_RNA-Seq ALG12-IL17REL ALG12 chr22 50303541 - IL17REL chr22 50447093 - Exonic hg19 ESCA TCGA-LN-A4MQ 4 CDS-5'UTR Intra-chr q13.33 q13.33 Seq+ 4086 ChimerSeq FusionScan TCGA_RNA-Seq ROCK1-CHD2 ROCK1 chr18 18600111 - CHD2 chr15 93510554 + Exonic hg19 ESCA TCGA-LN-A4MQ 2 In-Frame Inter-chr q11.1 AGC:DMPK q26.1 4087 ChimerSeq FusionScan TCGA_RNA-Seq SDK1-FOXK1 SDK1 chr7 3861215 + FOXK1 chr7 4794089 + Exonic hg19 ESCA TCGA-LN-A4MQ 2 Out-of-Frame Intra-chr p22.2 p22.1 Transcription factor 4088 ChimerSeq FusionScan TCGA_RNA-Seq FUS-IL9R FUS chr16 31193985 + IL9R chrY 59337090 + Exonic hg19 ESCA TCGA-IG-A51D 4 In-Frame Inter-chr p11.2 Tumor suppressor gene q28 Seq+ 4089 ChimerSeq FusionScan TCGA_RNA-Seq PFKM-ZDHHC13 PFKM chr12 48534654 + ZDHHC13 chr11 19186598 + Exonic hg19 ESCA TCGA-IG-A51D 2 In-Frame Inter-chr q13.11 p15.1 4090 ChimerSeq FusionScan TCGA_RNA-Seq IGBP1-ROBO1 IGBP1 chrX 69353390 + ROBO1 chr3 78796050 - Exonic hg19 ESCA TCGA-R6-A6L4 3 5'UTR-CDS Inter-chr q13.1 p12.3 Tumor suppressor gene 4091 ChimerSeq FusionScan TCGA_RNA-Seq ZMPSTE24-MEAF6 ZMPSTE24 chr1 40724066 + MEAF6 chr1 37959708 - Exonic hg19 ESCA TCGA-R6-A6L4 2 In-Frame Intra-chr p34.2 p34.3 4092 ChimerSeq FusionScan TCGA_RNA-Seq SPRR2A-SERINC2 SPRR2A chr1 153029946 - SERINC2 chr1 31905813 + Exonic hg19 ESCA TCGA-R6-A6L4 2 5'UTR-CDS Intra-chr q21.3 p35.2 4093 ChimerSeq FusionScan TCGA_RNA-Seq CD99L2-BCAP31 CD99L2 chrX 150066994 - BCAP31 chrX 152981144 - Exonic hg19 ESCA TCGA-R6-A6L4 2 In-Frame Intra-chr q28 q28 4094 ChimerSeq FusionScan TCGA_RNA-Seq AAK1-FNTA AAK1 chr2 69732700 - FNTA chr8 42919243 + Exonic hg19 ESCA TCGA-L5-A8NQ 2 In-Frame Inter-chr p13.3 Other:NAK p11.21 4095 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 ESCA TCGA-L5-A4OM 4 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 4096 ChimerSeq FusionScan TCGA_RNA-Seq ATP6V1D-ZFYVE26 ATP6V1D chr14 67826374 - ZFYVE26 chr14 68272335 - Exonic hg19 ESCA TCGA-L5-A4OM 2 Out-of-Frame Intra-chr q23.3 q24.1 Seq+ 4097 ChimerSeq FusionScan TCGA_RNA-Seq LAMA3-APOBEC1 LAMA3 chr18 21519350 + APOBEC1 chr12 7805431 - Exonic hg19 ESCA TCGA-L5-A8NJ 13 In-Frame Inter-chr q11.2 p13.31 Seq+ 4098 ChimerSeq FusionScan TCGA_RNA-Seq ACACA-C17orf78 ACACA chr17 35766351 - C17orf78 chr17 35746180 + Exonic hg19 ESCA TCGA-L5-A8NJ 12 Out-of-Frame Intra-chr 4099 ChimerSeq FusionScan TCGA_RNA-Seq PITPNC1-TEX14 PITPNC1 chr17 65529066 + TEX14 chr17 56729363 - Exonic hg19 ESCA TCGA-L5-A8NJ 3 CDS-5'UTR Intra-chr q24.2 q22 4100 ChimerSeq FusionScan TCGA_RNA-Seq PLD1-MEIS1 PLD1 chr3 171528188 - MEIS1 chr2 66739280 + Exonic hg19 ESCA TCGA-L5-A8NJ 2 5'UTR-CDS Inter-chr q26.31 Tumor suppressor gene p14 Transcription factor 4101 ChimerSeq FusionScan TCGA_RNA-Seq PLCH1-CDK5RAP2 PLCH1 chr3 155301260 - CDK5RAP2 chr9 123334319 - Exonic hg19 ESCA TCGA-L5-A8NJ 2 Out-of-Frame Inter-chr q25.31 q33.2 4102 ChimerSeq FusionScan TCGA_RNA-Seq SF1-NCBP2 SF1 chr11 64543969 - NCBP2 chr3 196664502 - Exonic hg19 ESCA TCGA-L5-A8NJ 2 In-Frame Inter-chr q13.1 q29 4103 ChimerSeq FusionScan TCGA_RNA-Seq HEATR7A-NOP14 HEATR7A chr8 145255444 + NOP14 chr4 2956290 - Exonic hg19 ESCA TCGA-L5-A8NJ 2 In-Frame Inter-chr p16.3 4104 ChimerSeq FusionScan TCGA_RNA-Seq ATP5D-SNHG12 ATP5D chr19 1242608 + SNHG12 chr1 28906493 - Exonic hg19 ESCA TCGA-L5-A8NJ 2 CDS-3'UTR Inter-chr p13.3 p35.3 4105 ChimerSeq FusionScan TCGA_RNA-Seq RANBP9-ZDHHC7 RANBP9 chr6 13639794 - ZDHHC7 chr16 85015600 - Exonic hg19 ESCA TCGA-L5-A8NJ 2 Out-of-Frame Inter-chr p23 Tumor suppressor gene q24.1 4106 ChimerSeq FusionScan TCGA_RNA-Seq RTN3-NMRAL1 RTN3 chr11 63449250 + NMRAL1 chr16 4519466 - Exonic hg19 ESCA TCGA-L5-A8NJ 2 In-Frame Inter-chr q13.1 p13.3 4107 ChimerSeq FusionScan TCGA_RNA-Seq PGAP3-ERBB2 PGAP3 chr17 37840849 - ERBB2 chr17 37844948 + Exonic hg19 ESCA TCGA-L5-A8NJ 2 CDS-5'UTR Intra-chr q12 Oncogene q12 Oncogene Seq+ 4108 ChimerSeq FusionScan TCGA_RNA-Seq ADAP1-SUN1 ADAP1 chr7 959604 - SUN1 chr7 908985 + Exonic hg19 ESCA TCGA-L5-A8NJ 2 Out-of-Frame Intra-chr p22.3 p22.3 Seq+ 4109 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D23-C3orf26 TBC1D23 chr3 99979915 + C3orf26 chr3 99879273 + Exonic hg19 ESCA TCGA-LN-A7HZ 8 Out-of-Frame Intra-chr q12.1 Seq+ 4110 ChimerSeq FusionScan TCGA_RNA-Seq CDH13-HSBP1 CDH13 chr16 83159106 + HSBP1 chr16 83842284 + Exonic hg19 ESCA TCGA-LN-A7HZ 2 In-Frame Intra-chr q23.3 Tumor suppressor gene q23.3 Seq+ 4111 ChimerSeq FusionScan TCGA_RNA-Seq C19orf70-DECR2 C19orf70 chr19 5679355 - DECR2 chr16 454955 + Exonic hg19 ESCA TCGA-LN-A7HZ 2 Out-of-Frame Inter-chr p13.3 4112 ChimerSeq FusionScan TCGA_RNA-Seq CORO2A-PSMB7 CORO2A chr9 100954840 - PSMB7 chr9 127146935 - Exonic hg19 ESCA TCGA-LN-A7HZ 2 5'UTR-CDS Intra-chr q22.33 q33.3 4113 ChimerSeq FusionScan TCGA_RNA-Seq CLTCL1-EIF3D CLTCL1 chr22 19175069 - EIF3D chr22 36922178 - Exonic hg19 ESCA TCGA-LN-A7HZ 2 CDS-5'UTR Intra-chr q11.21 q12.3 4114 ChimerSeq FusionScan TCGA_RNA-Seq PRKCZ-IFLTD1 PRKCZ chr1 1991030 + IFLTD1 chr12 25702480 - Exonic hg19 ESCA TCGA-IG-A4QS 3 Out-of-Frame Inter-chr p36.33 Tumor suppressor gene Seq+ 4115 ChimerSeq FusionScan TCGA_RNA-Seq YEATS2-NUDT5 YEATS2 chr3 183436380 + NUDT5 chr10 12209810 - Exonic hg19 ESCA TCGA-IG-A4QS 2 Out-of-Frame Inter-chr q27.1 p14 4116 ChimerSeq FusionScan TCGA_RNA-Seq PRKCZ-KRAS PRKCZ chr1 1982140 + KRAS chr12 25398329 - Exonic hg19 ESCA TCGA-IG-A4QS 2 CDS-5'UTR Inter-chr p36.33 p12.1 Oncogene 4117 ChimerSeq FusionScan TCGA_RNA-Seq LYRM5-CASC1 LYRM5 chr12 25348271 + CASC1 chr12 25314131 - Exonic hg19 ESCA TCGA-IG-A4QS 2 5'UTR-5'UTR Intra-chr p12.1 Tumor suppressor gene 4118 ChimerSeq FusionScan TCGA_RNA-Seq WDR92-NOP58 WDR92 chr2 68384505 - NOP58 chr2 203162101 + Exonic hg19 ESCA TCGA-IG-A4QS 2 3'UTR-CDS Intra-chr p14 q33.1 4119 ChimerSeq FusionScan TCGA_RNA-Seq SMG1-ABCC1 SMG1 chr16 18902184 - ABCC1 chr16 16196483 + Exonic hg19 ESCA TCGA-IG-A4QS 2 Out-of-Frame Intra-chr p12.3 Atypical:PIKK 4120 ChimerSeq FusionScan TCGA_RNA-Seq PARP8-CCDC91 PARP8 chr5 49963959 + CCDC91 chr12 28603093 + Exonic hg19 ESCA TCGA-IG-A4QS 2 Out-of-Frame Inter-chr q11.1 p11.22 4121 ChimerSeq FusionScan TCGA_RNA-Seq PRKCZ-IFLTD1 PRKCZ chr1 1991030 + IFLTD1 chr12 25679889 - Exonic hg19 ESCA TCGA-IG-A4QS 2 Out-of-Frame Inter-chr p36.33 Tumor suppressor gene Seq+ 4122 ChimerSeq FusionScan TCGA_RNA-Seq ZC3H3-EEF1D ZC3H3 chr8 144623545 - EEF1D chr8 144663324 - Exonic hg19 ESCA TCGA-IG-A4QS 2 In-Frame Intra-chr 4123 ChimerSeq FusionScan TCGA_RNA-Seq CCAR1-NCAPD2 CCAR1 chr10 70517134 + NCAPD2 chr12 6623430 + Exonic hg19 ESCA TCGA-IG-A4QS 2 Out-of-Frame Inter-chr q21.3 Tumor suppressor gene p13.31 4124 ChimerSeq FusionScan TCGA_RNA-Seq UBQLN4-SERINC2 UBQLN4 chr1 156023384 - SERINC2 chr1 31896539 + Exonic hg19 ESCA TCGA-IG-A4QS 2 In-Frame Intra-chr q22 p35.2 4125 ChimerSeq FusionScan TCGA_RNA-Seq STK3-NIPAL2 STK3 chr8 99538969 - NIPAL2 chr8 99266315 - Exonic hg19 ESCA TCGA-IC-A6RE 6 In-Frame Intra-chr q22.2 q22.2 Seq+ 4126 ChimerSeq FusionScan TCGA_RNA-Seq CASP7-TRUB1 CASP7 chr10 115457362 + TRUB1 chr10 116702403 + Exonic hg19 ESCA TCGA-IC-A6RE 4 Out-of-Frame Intra-chr q25.3 q25.3 Seq+ 4127 ChimerSeq FusionScan TCGA_RNA-Seq RELB-CLPTM1 RELB chr19 45532250 + CLPTM1 chr19 45476343 + Exonic hg19 ESCA TCGA-IC-A6RE 3 Out-of-Frame Intra-chr q13.32 Transcription factor q13.32 4128 ChimerSeq FusionScan TCGA_RNA-Seq MEPCE-SDC1 MEPCE chr7 100026528 + SDC1 chr2 20405185 - Exonic hg19 ESCA TCGA-IC-A6RE 3 5'UTR-CDS Inter-chr q22.1 p24.1 4129 ChimerSeq FusionScan TCGA_RNA-Seq CNOT2-MAP4 CNOT2 chr12 70637260 + MAP4 chr3 47919013 - Exonic hg19 ESCA TCGA-IC-A6RE 2 5'UTR-CDS Inter-chr q15 p21.31 4130 ChimerSeq FusionScan TCGA_RNA-Seq ADK-C10orf11 ADK chr10 75984349 + C10orf11 chr10 77795765 + Exonic hg19 ESCA TCGA-IC-A6RE 2 In-Frame Intra-chr q22.2 Seq+ 4131 ChimerSeq FusionScan TCGA_RNA-Seq LRRCC1-CYP51A1 LRRCC1 chr8 86027819 + CYP51A1 chr7 91743157 - Exonic hg19 ESCA TCGA-IC-A6RE 2 Out-of-Frame Inter-chr q21.2 q21.2 4132 ChimerSeq FusionScan TCGA_RNA-Seq TCTN3-EPB41L1 TCTN3 chr10 97453109 - EPB41L1 chr20 34700347 + Exonic hg19 ESCA TCGA-IC-A6RE 2 CDS-5'UTR Inter-chr q24.1 q11.23 4133 ChimerSeq FusionScan TCGA_RNA-Seq CUL4A-PCID2 CUL4A chr13 113873362 + PCID2 chr13 113850534 - Exonic hg19 ESCA TCGA-LN-A5U6 2 Out-of-Frame Intra-chr q34 q34 4134 ChimerSeq FusionScan TCGA_RNA-Seq C15orf29-AVEN C15orf29 chr15 34502151 - AVEN chr15 34168196 - Exonic hg19 ESCA TCGA-LN-A5U6 2 5'UTR-CDS Intra-chr q14 4135 ChimerSeq FusionScan TCGA_RNA-Seq PHF2-WWOX PHF2 chr9 96339153 + WWOX chr16 78420756 + Exonic hg19 ESCA TCGA-LN-A5U6 2 Out-of-Frame Inter-chr q22.31 q23.1 Tumor suppressor gene 4136 ChimerSeq FusionScan TCGA_RNA-Seq NFAT5-WWP2 NFAT5 chr16 69728142 + WWP2 chr16 69905706 + Exonic hg19 ESCA TCGA-LN-A5U6 2 Out-of-Frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 4137 ChimerSeq FusionScan TCGA_RNA-Seq GOSR1-USP7 GOSR1 chr17 28804482 + USP7 chr16 8993045 - Exonic hg19 ESCA TCGA-LN-A5U6 2 Out-of-Frame Inter-chr q11.2 p13.2 4138 ChimerSeq FusionScan TCGA_RNA-Seq KANSL3-HN1L KANSL3 chr2 97297048 - HN1L chr16 1735439 + Exonic hg19 ESCA TCGA-S8-A6BV 2 In-Frame Inter-chr q11.2 4139 ChimerSeq FusionScan TCGA_RNA-Seq JMJD6-GLT8D1 JMJD6 chr17 74714814 - GLT8D1 chr3 52730056 - Exonic hg19 ESCA TCGA-S8-A6BV 2 Out-of-Frame Inter-chr q25.1 p21.1 Seq+ 4140 ChimerSeq FusionScan TCGA_RNA-Seq LRFN3-FXYD7 LRFN3 chr19 36428457 + FXYD7 chr19 35639596 + Exonic hg19 ESCA TCGA-LN-A49L 18 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 4141 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-RHBDD2 PTPN12 chr7 77166962 + RHBDD2 chr7 75510682 + Exonic hg19 ESCA TCGA-LN-A49L 16 CDS-5'UTR Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 4142 ChimerSeq FusionScan TCGA_RNA-Seq SEC61A2-CDC123 SEC61A2 chr10 12191960 + CDC123 chr10 12277046 + Exonic hg19 ESCA TCGA-LN-A49L 12 In-Frame Intra-chr p14 p14 4143 ChimerSeq FusionScan TCGA_RNA-Seq BRCC3-FAM50A BRCC3 chrX 154306978 + FAM50A chrX 153673980 + Exonic hg19 ESCA TCGA-LN-A49L 10 Out-of-Frame Intra-chr q28 q28 Seq+ 4144 ChimerSeq FusionScan TCGA_RNA-Seq CHD7-KAT6A CHD7 chr8 61591641 + KAT6A chr8 41845081 - Exonic hg19 ESCA TCGA-LN-A49L 6 5'UTR-CDS Intra-chr q12.2 p11.21 Oncogene Seq+ 4145 ChimerSeq FusionScan TCGA_RNA-Seq C16orf70-DNAAF1 C16orf70 chr16 67144142 + DNAAF1 chr16 84193279 + Exonic hg19 ESCA TCGA-LN-A49L 5 Out-of-Frame Intra-chr q22.1 q24.1 Seq+ 4146 ChimerSeq FusionScan TCGA_RNA-Seq PSMD5-CDK5RAP2 PSMD5 chr9 123593608 - CDK5RAP2 chr9 123308068 - Exonic hg19 ESCA TCGA-LN-A49L 5 In-Frame Intra-chr q33.2 q33.2 Seq+ 4147 ChimerSeq FusionScan TCGA_RNA-Seq N4BP1-ABCC12 N4BP1 chr16 48594664 - ABCC12 chr16 48167746 - Exonic hg19 ESCA TCGA-LN-A49L 4 Out-of-Frame Intra-chr q12.1 q12.1 Seq+ 4148 ChimerSeq FusionScan TCGA_RNA-Seq CAMK1D-ECHDC3 CAMK1D chr10 12391909 + ECHDC3 chr10 11789347 + Exonic hg19 ESCA TCGA-LN-A49L 4 In-Frame Intra-chr p13 p14 Seq+ 4149 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-RHBDD2 PTPN12 chr7 77166962 + RHBDD2 chr7 75511146 + Exonic hg19 ESCA TCGA-LN-A49L 4 Out-of-Frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 4150 ChimerSeq FusionScan TCGA_RNA-Seq STAG1-MSL2 STAG1 chr3 136471036 - MSL2 chr3 135871580 - Exonic hg19 ESCA TCGA-LN-A49L 3 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 4151 ChimerSeq FusionScan TCGA_RNA-Seq UBR5-ATP5C1 UBR5 chr8 103372298 - ATP5C1 chr10 7848936 + Exonic hg19 ESCA TCGA-LN-A49L 2 In-Frame Inter-chr q22.3 Oncogene p14 4152 ChimerSeq FusionScan TCGA_RNA-Seq EIF2S1-GPHN EIF2S1 chr14 67827173 + GPHN chr14 67576856 + Exonic hg19 ESCA TCGA-LN-A5U5 8 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 4153 ChimerSeq FusionScan TCGA_RNA-Seq DMXL1-TNFAIP8 DMXL1 chr5 118452031 + TNFAIP8 chr5 118728510 + Exonic hg19 ESCA TCGA-LN-A5U5 2 Out-of-Frame Intra-chr q23.1 q23.1 Seq+ 4154 ChimerSeq FusionScan TCGA_RNA-Seq IST1-ATXN1L IST1 chr16 71929492 + ATXN1L chr16 71917019 + Exonic hg19 ESCA TCGA-IG-A97H 4 5'UTR-5'UTR Intra-chr q22.2 q22.2 4155 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-PLXNB2 CPSF6 chr12 69656342 + PLXNB2 chr22 50727571 - Exonic hg19 ESCA TCGA-IG-A97H 2 3'UTR-CDS Inter-chr q15 q13.33 4156 ChimerSeq FusionScan TCGA_RNA-Seq PPM1G-IFT172 PPM1G chr2 27632169 - IFT172 chr2 27682389 - Exonic hg19 ESCA TCGA-IG-A97H 2 Out-of-Frame Intra-chr p23.3 p23.3 Seq+ 4157 ChimerSeq FusionScan TCGA_RNA-Seq ARFGEF2-TBL2 ARFGEF2 chr20 47592736 + TBL2 chr7 72985671 - Exonic hg19 ESCA TCGA-IG-A97H 2 In-Frame Inter-chr q13.13 q11.23 Tumor suppressor gene 4158 ChimerSeq FusionScan TCGA_RNA-Seq CHMP1A-FANCA CHMP1A chr16 89723989 - FANCA chr16 89851372 - Exonic hg19 ESCA TCGA-IG-A97H 2 Out-of-Frame Intra-chr q24.3 q24.3 Oncogene Seq+ 4159 ChimerSeq FusionScan TCGA_RNA-Seq NOM1-RNF32 NOM1 chr7 156746992 + RNF32 chr7 156468389 + Exonic hg19 ESCA TCGA-L5-A4OS 9 In-Frame Intra-chr q36.3 q36.3 Seq+ 4160 ChimerSeq FusionScan TCGA_RNA-Seq NELF-ZMYND19 NELF chr9 140346816 - ZMYND19 chr9 140477138 - Exonic hg19 ESCA TCGA-L5-A4OS 8 In-Frame Intra-chr q34.3 Seq+ 4161 ChimerSeq FusionScan TCGA_RNA-Seq SMURF1-CFLAR SMURF1 chr7 98741348 - CFLAR chr2 201994451 + Exonic hg19 ESCA TCGA-L5-A4OS 7 CDS-5'UTR Inter-chr q33.1 Seq+ 4162 ChimerSeq FusionScan TCGA_RNA-Seq STAT2-ANKRD52 STAT2 chr12 56753841 - ANKRD52 chr12 56642654 - Exonic hg19 ESCA TCGA-L5-A4OS 6 5'UTR-CDS Intra-chr q13.3 Transcription factor q13.3 Seq+ 4163 ChimerSeq FusionScan TCGA_RNA-Seq JUP-KLHL11 JUP chr17 39919234 - KLHL11 chr17 40011573 - Exonic hg19 ESCA TCGA-L5-A4OS 6 Out-of-Frame Intra-chr q21.2 Tumor suppressor gene q21.2 Seq+ 4164 ChimerSeq FusionScan TCGA_RNA-Seq GNB1-KIAA1751 GNB1 chr1 1822258 - KIAA1751 chr1 1897965 - Exonic hg19 ESCA TCGA-L5-A4OS 5 5'UTR-CDS Intra-chr p36.33 4165 ChimerSeq FusionScan TCGA_RNA-Seq CBL-TRAPPC4 CBL chr11 119158656 + TRAPPC4 chr11 118894030 + Exonic hg19 ESCA TCGA-L5-A4OS 5 In-Frame Intra-chr q23.3 Oncogene Tumor suppressor gene Seq+ 4166 ChimerSeq FusionScan TCGA_RNA-Seq ACLY-WEE1 ACLY chr17 40030063 - WEE1 chr11 9609995 + Exonic hg19 ESCA TCGA-L5-A4OS 5 In-Frame Inter-chr q21.2 p15.4 Seq+ 4167 ChimerSeq FusionScan TCGA_RNA-Seq CRAMP1L-IFT140 CRAMP1L chr16 1664986 + IFT140 chr16 1621535 - Exonic hg19 ESCA TCGA-L5-A4OS 4 Out-of-Frame Intra-chr p13.3 Seq+ 4168 ChimerSeq FusionScan TCGA_RNA-Seq UBN1-MGRN1 UBN1 chr16 4918904 + MGRN1 chr16 4723498 + Exonic hg19 ESCA TCGA-L5-A4OS 4 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 4169 ChimerSeq FusionScan TCGA_RNA-Seq ACOT7-PLEKHG5 ACOT7 chr1 6341161 - PLEKHG5 chr1 6556629 - Exonic hg19 ESCA TCGA-L5-A4OS 3 Out-of-Frame Intra-chr p36.31 p36.31 Oncogene Seq+ 4170 ChimerSeq FusionScan TCGA_RNA-Seq EIF3L-TRIOBP EIF3L chr22 38274178 + TRIOBP chr22 38106433 + Exonic hg19 ESCA TCGA-L5-A4OS 3 In-Frame Intra-chr q13.1 q13.1 Seq+ 4171 ChimerSeq FusionScan TCGA_RNA-Seq DLG1-BDH1 DLG1 chr3 197009549 - BDH1 chr3 197249652 - Exonic hg19 ESCA TCGA-L5-A4OS 3 In-Frame Intra-chr q29 Tumor suppressor gene Seq+ 4172 ChimerSeq FusionScan TCGA_RNA-Seq GRB2-PADI1 GRB2 chr17 73317739 - PADI1 chr1 17570504 + Exonic hg19 ESCA TCGA-L5-A4OS 3 In-Frame Inter-chr q25.1 Seq+ 4173 ChimerSeq FusionScan TCGA_RNA-Seq CACNA1D-GNL3 CACNA1D chr3 53804579 + GNL3 chr3 52724607 + Exonic hg19 ESCA TCGA-L5-A4OS 2 Out-of-Frame Intra-chr p21.1 p21.1 Seq+ 4174 ChimerSeq FusionScan TCGA_RNA-Seq MAFF-RCOR1 MAFF chr22 38598219 + RCOR1 chr14 103148231 + Exonic hg19 ESCA TCGA-L5-A4OS 2 5'UTR-CDS Inter-chr q13.1 Transcription factor q32.31 Seq+ 4175 ChimerSeq FusionScan TCGA_RNA-Seq C20orf132-AFAP1L1 C20orf132 chr20 35737001 - AFAP1L1 chr5 148719569 + Exonic hg19 ESCA TCGA-L5-A4OS 2 Out-of-Frame Inter-chr q32 4176 ChimerSeq FusionScan TCGA_RNA-Seq FKBP5-CLPS FKBP5 chr6 35604790 - CLPS chr6 35763054 - Exonic hg19 ESCA TCGA-L5-A4OS 2 Out-of-Frame Intra-chr p21.31 p21.31 4177 ChimerSeq FusionScan TCGA_RNA-Seq NCK1-IL20RB NCK1 chr3 136665137 + IL20RB chr3 136728954 + Exonic hg19 ESCA TCGA-L5-A4OS 2 In-Frame Intra-chr q22.3 q22.3 Seq+ 4178 ChimerSeq FusionScan TCGA_RNA-Seq ADRBK1-MYO18A ADRBK1 chr11 67034283 + MYO18A chr17 27409456 - Exonic hg19 ESCA TCGA-L5-A4OS 2 In-Frame Inter-chr q11.2 Oncogene 4179 ChimerSeq FusionScan TCGA_RNA-Seq ACTL8-ACOX1 ACTL8 chr1 18081999 + ACOX1 chr17 73974774 - Exonic hg19 ESCA TCGA-L5-A4OS 2 5'UTR-5'UTR Inter-chr p36.13 q25.1 Seq+ 4180 ChimerSeq FusionScan TCGA_RNA-Seq ZNF43-PLAGL1 ZNF43 chr19 22034706 - PLAGL1 chr6 144290115 - Exonic hg19 ESCA TCGA-L5-A4OS 2 5'UTR-5'UTR Inter-chr p12 Transcription factor q24.2 Tumor suppressor gene Transcription factor 4181 ChimerSeq FusionScan TCGA_RNA-Seq EWSR1-KREMEN1 EWSR1 chr22 29668420 + KREMEN1 chr22 29517344 + Exonic hg19 ESCA TCGA-L5-A4OS 2 Out-of-Frame Intra-chr q12.2 q12.1 Seq+ 4182 ChimerSeq FusionScan TCGA_RNA-Seq FAM200A-CYP3A5 FAM200A chr7 99149476 - CYP3A5 chr7 99264688 - Exonic hg19 ESCA TCGA-L5-A4OS 2 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 4183 ChimerSeq FusionScan TCGA_RNA-Seq PEAK1-SCAPER PEAK1 chr15 77544708 - SCAPER chr15 77067458 - Exonic hg19 ESCA TCGA-IG-A97I 2 5'UTR-CDS Intra-chr q24.3 q24.3 4184 ChimerSeq FusionScan TCGA_RNA-Seq TIMM17B-PQBP1 TIMM17B chrX 48755349 - PQBP1 chrX 48755212 + Exonic hg19 ESCA TCGA-IG-A97I 2 5'UTR-5'UTR Intra-chr p11.23 p11.23 Seq+ 4185 ChimerSeq FusionScan TCGA_RNA-Seq EXOC6-CYP26A1 EXOC6 chr10 94708136 + CYP26A1 chr10 94834064 + Exonic hg19 ESCA TCGA-IG-A97I 2 In-Frame Intra-chr q23.33 q23.33 4186 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPH3-EIF4G3 HNRNPH3 chr10 70091973 + EIF4G3 chr1 21437876 - Exonic hg19 ESCA TCGA-IG-A97I 2 5'UTR-5'UTR Inter-chr q21.3 p36.12 4187 ChimerSeq FusionScan TCGA_RNA-Seq LDLR-DOCK6 LDLR chr19 11224438 + DOCK6 chr19 11364402 - Exonic hg19 ESCA TCGA-IG-A97I 2 In-Frame Intra-chr p13.2 p13.2 4188 ChimerSeq FusionScan TCGA_RNA-Seq BTN3A2-MACF1 BTN3A2 chr6 26370831 + MACF1 chr1 39920580 + Exonic hg19 ESCA TCGA-IG-A97I 2 Out-of-Frame Inter-chr p22.2 p34.3 4189 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KA3-NUP50 RPS6KA3 chrX 20187519 - NUP50 chr22 45567480 + Exonic hg19 ESCA TCGA-IG-A97I 2 In-Frame Inter-chr p22.12 q13.31 4190 ChimerSeq FusionScan TCGA_RNA-Seq CASP8-STRADB CASP8 chr2 202098835 + STRADB chr2 202337677 + Exonic hg19 ESCA TCGA-LN-A49O 5 5'UTR-CDS Intra-chr q33.1 Oncogene Tumor suppressor gene q33.1 Seq+ 4191 ChimerSeq FusionScan TCGA_RNA-Seq SLC24A3-RIN2 SLC24A3 chr20 19261731 + RIN2 chr20 19970649 + Exonic hg19 ESCA TCGA-LN-A49O 4 In-Frame Intra-chr p11.23 p11.23 Seq+ 4192 ChimerSeq FusionScan TCGA_RNA-Seq CRHR1-KANSL1 CRHR1 chr17 43699407 + KANSL1 chr17 44128070 - Exonic hg19 ESCA TCGA-LN-A49O 3 5'UTR-CDS Intra-chr q21.31 Pub 4193 ChimerSeq FusionScan TCGA_RNA-Seq CARM1-SMARCA4 CARM1 chr19 11019883 + SMARCA4 chr19 11094796 + Exonic hg19 ESCA TCGA-LN-A49O 3 CDS-5'UTR Intra-chr p13.2 p13.2 Oncogene Tumor suppressor gene Seq+ 4194 ChimerSeq FusionScan TCGA_RNA-Seq TRIP12-HERC3 TRIP12 chr2 230744697 - HERC3 chr4 89625248 + Exonic hg19 ESCA TCGA-LN-A49O 2 In-Frame Inter-chr q36.3 q22.1 4195 ChimerSeq FusionScan TCGA_RNA-Seq SEPT2-HDLBP SEPT2 chr2 242255397 + HDLBP chr2 242207956 - Exonic hg19 ESCA TCGA-L5-A8NM 2 5'UTR-5'UTR Intra-chr q37.3 q37.3 4196 ChimerSeq FusionScan TCGA_RNA-Seq GOLGA8A-DDB2 GOLGA8A chr15 34680033 - DDB2 chr11 47259387 + Exonic hg19 ESCA TCGA-L5-A8NM 2 In-Frame Inter-chr q14 p11.2 Oncogene Tumor suppressor gene 4197 ChimerSeq FusionScan TCGA_RNA-Seq GOLGA8B-DDB2 GOLGA8B chr15 34826254 - DDB2 chr11 47259387 + Exonic hg19 ESCA TCGA-L5-A8NM 2 In-Frame Inter-chr q14 p11.2 Oncogene Tumor suppressor gene 4198 ChimerSeq FusionScan TCGA_RNA-Seq UBASH3A-KIAA0195 UBASH3A chr21 43833331 + KIAA0195 chr17 73485346 + Exonic hg19 ESCA TCGA-L5-A8NM 2 Out-of-Frame Inter-chr q22.3 4199 ChimerSeq FusionScan TCGA_RNA-Seq SMAP2-B3GNTL1 SMAP2 chr1 40875507 + B3GNTL1 chr17 81006661 - Exonic hg19 ESCA TCGA-L5-A8NM 2 In-Frame Inter-chr p34.2 4200 ChimerSeq FusionScan TCGA_RNA-Seq ZC3H13-TCF7L2 ZC3H13 chr13 46626832 - TCF7L2 chr10 114799783 + Exonic hg19 ESCA TCGA-L5-A8NM 2 5'UTR-CDS Inter-chr q14.13 q25.2 Oncogene Tumor suppressor gene Transcription factor 4201 ChimerSeq FusionScan TCGA_RNA-Seq GNB1-SSU72 GNB1 chr1 1770628 - SSU72 chr1 1500296 - Exonic hg19 ESCA TCGA-LN-A4A1 36 5'UTR-CDS Intra-chr p36.33 p36.33 Seq+ 4202 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R13B-XRCC3 PPP1R13B chr14 104313635 - XRCC3 chr14 104169664 - Exonic hg19 ESCA TCGA-LN-A4A1 16 Out-of-Frame Intra-chr q32.33 q32.33 Seq+ 4203 ChimerSeq FusionScan TCGA_RNA-Seq GNB1-SSU72 GNB1 chr1 1822258 - SSU72 chr1 1500296 - Exonic hg19 ESCA TCGA-LN-A4A1 13 5'UTR-CDS Intra-chr p36.33 p36.33 Seq+ 4204 ChimerSeq FusionScan TCGA_RNA-Seq SMARCAD1-GRID2 SMARCAD1 chr4 95174158 + GRID2 chr4 94128554 + Exonic hg19 ESCA TCGA-LN-A4A1 5 In-Frame Intra-chr q22.3 q22.1 Seq+ 4205 ChimerSeq FusionScan TCGA_RNA-Seq CPEB4-SHISA5 CPEB4 chr5 173337607 + SHISA5 chr3 48520666 - Exonic hg19 ESCA TCGA-LN-A4A1 4 Out-of-Frame Inter-chr q35.2 p21.31 Seq+ 4206 ChimerSeq FusionScan TCGA_RNA-Seq SOS2-CHD8 SOS2 chr14 50612194 - CHD8 chr14 21854335 - Exonic hg19 ESCA TCGA-LN-A4A1 3 Out-of-Frame Intra-chr q21.3 q11.2 4207 ChimerSeq FusionScan TCGA_RNA-Seq ENOPH1-CCNI ENOPH1 chr4 83352066 + CCNI chr4 77969815 - Exonic hg19 ESCA TCGA-LN-A4A1 2 In-Frame Intra-chr q21.22 q21.1 4208 ChimerSeq FusionScan TCGA_RNA-Seq PPP3R1-CBWD2 PPP3R1 chr2 68413599 - CBWD2 chr2 114251333 + Exonic hg19 ESCA TCGA-LN-A4A1 2 In-Frame Intra-chr p14 q14.1 4209 ChimerSeq FusionScan TCGA_RNA-Seq SMARCAD1-GRID2 SMARCAD1 chr4 95174822 + GRID2 chr4 94128554 + Exonic hg19 ESCA TCGA-LN-A4A1 2 5'UTR-CDS Intra-chr q22.3 q22.1 Seq+ 4210 ChimerSeq FusionScan TCGA_RNA-Seq ZFAND3-PERP ZFAND3 chr6 37787792 + PERP chr6 138417631 - Exonic hg19 ESCA TCGA-LN-A4A1 2 Out-of-Frame Intra-chr p21.2 q23.3 4211 ChimerSeq FusionScan TCGA_RNA-Seq EEF1G-TUT1 EEF1G chr11 62334277 - TUT1 chr11 62346502 - Exonic hg19 ESCA TCGA-LN-A9FQ 9 Out-of-Frame Intra-chr q12.3 q12.3 Seq+ 4212 ChimerSeq FusionScan TCGA_RNA-Seq ESRRA-SETX ESRRA chr11 64074976 + SETX chr9 135147195 - Exonic hg19 ESCA TCGA-LN-A9FQ 2 Out-of-Frame Inter-chr q13.1 Transcription factor q34.13 4213 ChimerSeq FusionScan TCGA_RNA-Seq KIF16B-C18orf34 KIF16B chr20 16352309 - C18orf34 chr18 30554645 - Exonic hg19 ESCA TCGA-LN-A49P 3 In-Frame Inter-chr p12.1 4214 ChimerSeq FusionScan TCGA_RNA-Seq LDLRAD3-PVRL2 LDLRAD3 chr11 35965694 + PVRL2 chr19 45368527 + Exonic hg19 ESCA TCGA-LN-A49P 2 In-Frame Inter-chr p13 4215 ChimerSeq FusionScan TCGA_RNA-Seq CAMK1D-ZMIZ1 CAMK1D chr10 12811798 + ZMIZ1 chr10 80878671 + Exonic hg19 ESCA TCGA-LN-A49P 2 CDS-5'UTR Intra-chr p13 q22.3 4216 ChimerSeq FusionScan TCGA_RNA-Seq RYK-MAN1A2 RYK chr3 133969266 - MAN1A2 chr1 117944807 + Exonic hg19 ESCA TCGA-LN-A49P 2 In-Frame Inter-chr q22.2 TK:Ryk p12 4217 ChimerSeq FusionScan TCGA_RNA-Seq IQCG-ARAP2 IQCG chr3 197686399 - ARAP2 chr4 36075445 - Exonic hg19 ESCA TCGA-LN-A49P 2 5'UTR-CDS Inter-chr q29 p14 4218 ChimerSeq FusionScan TCGA_RNA-Seq SEL1L3-MFSD11 SEL1L3 chr4 25789845 - MFSD11 chr17 74765827 + Exonic hg19 ESCA TCGA-LN-A49P 2 Out-of-Frame Inter-chr p15.2 q25.1 4219 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 ESCA TCGA-IG-A8O2 7 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 4220 ChimerSeq FusionScan TCGA_RNA-Seq EPC1-AKR1E2 EPC1 chr10 32635690 - AKR1E2 chr10 4872866 + Exonic hg19 ESCA TCGA-IG-A8O2 5 In-Frame Intra-chr p11.22 p15.1 Seq+ 4221 ChimerSeq FusionScan TCGA_RNA-Seq PARD3-NRXN1 PARD3 chr10 34985245 - NRXN1 chr2 50318632 - Exonic hg19 ESCA TCGA-IG-A8O2 4 In-Frame Inter-chr p11.21 p16.3 Seq+ 4222 ChimerSeq FusionScan TCGA_RNA-Seq BCL11A-PTPLA BCL11A chr2 60773105 - PTPLA chr10 17646046 - Exonic hg19 ESCA TCGA-IG-A8O2 4 Out-of-Frame Inter-chr p16.1 Oncogene Transcription factor Seq+ 4223 ChimerSeq FusionScan TCGA_RNA-Seq MPP7-ZEB1 MPP7 chr10 28491081 - ZEB1 chr10 31791275 + Exonic hg19 ESCA TCGA-IG-A8O2 3 Out-of-Frame Intra-chr p12.1 p11.22 Transcription factor Seq+ 4224 ChimerSeq FusionScan TCGA_RNA-Seq PPP6R3-ANAPC4 PPP6R3 chr11 68228295 + ANAPC4 chr4 25404592 + Exonic hg19 ESCA TCGA-IG-A8O2 2 5'UTR-CDS Inter-chr q13.2 p15.2 4225 ChimerSeq FusionScan TCGA_RNA-Seq FBXO11-NET1 FBXO11 chr2 48065997 - NET1 chr10 5493792 + Exonic hg19 ESCA TCGA-IG-A8O2 2 Out-of-Frame Inter-chr p16.3 p15.1 4226 ChimerSeq FusionScan TCGA_RNA-Seq ZNF418-USP25 ZNF418 chr19 58441795 - USP25 chr21 17203719 + Exonic hg19 ESCA TCGA-IG-A8O2 2 Out-of-Frame Inter-chr q13.43 Transcription factor q21.1 Seq+ 4227 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 ESCA TCGA-LN-A49Y 3 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 4228 ChimerSeq FusionScan TCGA_RNA-Seq SLC25A13-MGC72080 SLC25A13 chr7 95906507 - MGC72080 chr7 97599157 - Exonic hg19 ESCA TCGA-LN-A49Y 3 3'UTR-3'UTR Intra-chr q21.3 4229 ChimerSeq FusionScan TCGA_RNA-Seq GPN3-USP36 GPN3 chr12 110893390 - USP36 chr17 76810634 - Exonic hg19 ESCA TCGA-LN-A49Y 2 In-Frame Inter-chr q24.11 q25.3 4230 ChimerSeq FusionScan TCGA_RNA-Seq PBRM1-PCMTD1 PBRM1 chr3 52661288 - PCMTD1 chr8 52733278 - Exonic hg19 ESCA TCGA-LN-A49Y 2 Out-of-Frame Inter-chr p21.1 Oncogene Tumor suppressor gene q11.23 4231 ChimerSeq FusionScan TCGA_RNA-Seq EEF1G-AHNAK EEF1G chr11 62334277 - AHNAK chr11 62201363 - Exonic hg19 ESCA TCGA-L5-A8NK 6 Out-of-Frame Intra-chr q12.3 q12.3 Tumor suppressor gene Seq+ 4232 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP10-RPL30 ARHGAP10 chr4 148944564 + RPL30 chr8 99057627 - Exonic hg19 ESCA TCGA-L5-A8NK 2 CDS-5'UTR Inter-chr q31.23 q22.2 4233 ChimerSeq FusionScan TCGA_RNA-Seq UBE3B-PTPN11 UBE3B chr12 109915914 + PTPN11 chr12 112884079 + Exonic hg19 ESCA TCGA-L5-A8NK 2 5'UTR-CDS Intra-chr q24.11 q24.13 Oncogene Tumor suppressor gene 4234 ChimerSeq FusionScan TCGA_RNA-Seq SEP15-CLTC 2019_ 9_ 15_ chr1 87368963 - CLTC chr17 57760267 + Exonic hg19 ESCA TCGA-L5-A8NK 2 In-Frame Inter-chr q23.1 4235 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 ESCA TCGA-L5-A8NK 2 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 4236 ChimerSeq FusionScan TCGA_RNA-Seq CERS5-INO80C CERS5 chr12 50560883 - INO80C chr18 33060527 - Exonic hg19 ESCA TCGA-L5-A8NK 2 Out-of-Frame Inter-chr q13.12 q12.2 4237 ChimerSeq FusionScan TCGA_RNA-Seq NCK1-IL20RB NCK1 chr3 136647069 + IL20RB chr3 136699307 + Exonic hg19 ESCA TCGA-V5-A7RC 3 In-Frame Intra-chr q22.3 q22.3 Seq+ 4238 ChimerSeq FusionScan TCGA_RNA-Seq TAOK1-APEX1 TAOK1 chr17 27794234 + APEX1 chr14 20923736 + Exonic hg19 ESCA TCGA-V5-A7RC 2 CDS-5'UTR Inter-chr q11.2 q11.2 Oncogene 4239 ChimerSeq FusionScan TCGA_RNA-Seq TRIM26-DHX16 TRIM26 chr6 30181081 - DHX16 chr6 30627611 - Exonic hg19 ESCA TCGA-JY-A939 33 5'UTR-5'UTR Intra-chr Seq+ 4240 ChimerSeq FusionScan TCGA_RNA-Seq TRIM26-DHX16 TRIM26 chr6 30181081 - DHX16 chr6 30628019 - Exonic hg19 ESCA TCGA-JY-A939 9 5'UTR-5'UTR Intra-chr Seq+ 4241 ChimerSeq FusionScan TCGA_RNA-Seq HIP1R-UBL5 HIP1R chr12 123332641 + UBL5 chr19 9939267 + Exonic hg19 ESCA TCGA-JY-A939 2 Out-of-Frame Inter-chr q24.31 p13.2 Tumor suppressor gene 4242 ChimerSeq FusionScan TCGA_RNA-Seq C22orf39-MAPK1 C22orf39 chr22 19434900 - MAPK1 chr22 22162135 - Exonic hg19 ESCA TCGA-JY-A939 2 Out-of-Frame Intra-chr q11.21 q11.22 Oncogene 4243 ChimerSeq FusionScan TCGA_RNA-Seq KPNB1-UBAP2L KPNB1 chr17 45736026 + UBAP2L chr1 154231452 + Exonic hg19 ESCA TCGA-JY-A939 2 In-Frame Inter-chr q21.32 q21.3 4244 ChimerSeq FusionScan TCGA_RNA-Seq ABI2-PPP1R1C ABI2 chr2 204193354 + PPP1R1C chr2 182926168 + Exonic hg19 ESCA TCGA-LN-A49V 14 Out-of-Frame Intra-chr q33.2 Tumor suppressor gene q31.3 Seq+ 4245 ChimerSeq FusionScan TCGA_RNA-Seq CNOT10-CMTM7 CNOT10 chr3 32758729 + CMTM7 chr3 32493883 + Exonic hg19 ESCA TCGA-LN-A49V 13 In-Frame Intra-chr p22.3 p22.3 Seq+ 4246 ChimerSeq FusionScan TCGA_RNA-Seq MRPL48-PLEKHB1 MRPL48 chr11 73519395 + PLEKHB1 chr11 73360056 + Exonic hg19 ESCA TCGA-LN-A49V 6 Out-of-Frame Intra-chr q13.4 q13.4 Seq+ 4247 ChimerSeq FusionScan TCGA_RNA-Seq SH3GLB2-WDR34 SH3GLB2 chr9 131771384 - WDR34 chr9 131403218 - Exonic hg19 ESCA TCGA-LN-A49V 5 In-Frame Intra-chr q34.11 q34.11 Seq+ 4248 ChimerSeq FusionScan TCGA_RNA-Seq PRPF8-ENY2 PRPF8 chr17 1578445 - ENY2 chr8 110355633 + Exonic hg19 ESCA TCGA-LN-A49V 2 Out-of-Frame Inter-chr q23.1 4249 ChimerSeq FusionScan TCGA_RNA-Seq HNRPDL-ANKS6 HNRPDL chr4 83350400 - ANKS6 chr9 101547158 - Exonic hg19 ESCA TCGA-LN-A49V 2 Out-of-Frame Inter-chr q22.33 4250 ChimerSeq FusionScan TCGA_RNA-Seq PUM1-MBOAT2 PUM1 chr1 31478699 - MBOAT2 chr2 9098771 - Exonic hg19 ESCA TCGA-LN-A49V 2 In-Frame Inter-chr p35.2 p25.1 4251 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R5C-INSR PPP2R5C chr14 102349899 + INSR chr19 7184648 - Exonic hg19 ESCA TCGA-LN-A49V 2 Out-of-Frame Inter-chr q32.31 Tumor suppressor gene p13.2 TK:InsR 4252 ChimerSeq FusionScan TCGA_RNA-Seq CTTN-CISD2 CTTN chr11 70263229 + CISD2 chr4 103808497 + Exonic hg19 ESCA TCGA-IG-A3Y9 4 Out-of-Frame Inter-chr q13.3 q24 Seq+ 4253 ChimerSeq FusionScan TCGA_RNA-Seq AARS-CEP192 AARS chr16 70316522 - CEP192 chr18 13114128 + Exonic hg19 ESCA TCGA-IG-A3Y9 3 In-Frame Inter-chr q22.1 p11.21 4254 ChimerSeq FusionScan TCGA_RNA-Seq EPDR1-STARD3NL EPDR1 chr7 37960810 + STARD3NL chr7 38253957 + Exonic hg19 ESCA TCGA-IG-A3Y9 2 Out-of-Frame Intra-chr p14.1 p14.1 4255 ChimerSeq FusionScan TCGA_RNA-Seq UBA1-DST UBA1 chrX 47069522 + DST chr6 56342286 - Exonic hg19 ESCA TCGA-IG-A3Y9 2 In-Frame Inter-chr p11.3 p12.1 Oncogene 4256 ChimerSeq FusionScan TCGA_RNA-Seq CD44-BPIFC CD44 chr11 35211612 + BPIFC chr22 32810412 - Exonic hg19 ESCA TCGA-IG-A3Y9 2 Out-of-Frame Inter-chr p13 Oncogene Tumor suppressor gene q12.3 4257 ChimerSeq FusionScan TCGA_RNA-Seq TMSB4X-KRT14 TMSB4X chrX 12993287 + KRT14 chr17 39738784 - Exonic hg19 ESCA TCGA-IG-A3Y9 2 5'UTR-CDS Inter-chr p22.2 q21.2 4258 ChimerSeq FusionScan TCGA_RNA-Seq RBFOX2-MICAL3 RBFOX2 chr22 36424287 - MICAL3 chr22 18293579 - Exonic hg19 ESCA TCGA-IG-A3Y9 2 In-Frame Intra-chr q11.21 4259 ChimerSeq FusionScan TCGA_RNA-Seq SEPT2-HDLBP SEPT2 chr2 242255397 + HDLBP chr2 242207956 - Exonic hg19 ESCA TCGA-L5-A8NM 2 5'UTR-5'UTR Intra-chr q37.3 q37.3 4260 ChimerSeq FusionScan TCGA_RNA-Seq GOLGA8A-DDB2 GOLGA8A chr15 34680033 - DDB2 chr11 47259387 + Exonic hg19 ESCA TCGA-L5-A8NM 2 In-Frame Inter-chr q14 p11.2 Oncogene Tumor suppressor gene 4261 ChimerSeq FusionScan TCGA_RNA-Seq GOLGA8B-DDB2 GOLGA8B chr15 34826254 - DDB2 chr11 47259387 + Exonic hg19 ESCA TCGA-L5-A8NM 2 In-Frame Inter-chr q14 p11.2 Oncogene Tumor suppressor gene 4262 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 ESCA TCGA-Z6-A8JD 4 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 4263 ChimerSeq FusionScan TCGA_RNA-Seq RFX2-MLLT1 RFX2 chr19 6110403 - MLLT1 chr19 6230724 - Exonic hg19 ESCA TCGA-Z6-A8JD 3 5'UTR-CDS Intra-chr p13.3 Transcription factor p13.3 Seq+ 4264 ChimerSeq FusionScan TCGA_RNA-Seq MMP17-NOC4L MMP17 chr12 132313198 + NOC4L chr12 132635525 + Exonic hg19 ESCA TCGA-Z6-A8JD 3 Out-of-Frame Intra-chr q24.33 q24.33 Seq+ 4265 ChimerSeq FusionScan TCGA_RNA-Seq ANXA2-SURF1 ANXA2 chr15 60646352 - SURF1 chr9 136221812 - Exonic hg19 ESCA TCGA-Z6-A8JD 2 Out-of-Frame Inter-chr q22.2 4266 ChimerSeq FusionScan TCGA_RNA-Seq ZNF133-ICA1 ZNF133 chr20 18269248 + ICA1 chr7 8167772 - Exonic hg19 ESCA TCGA-Z6-A8JD 2 5'UTR-CDS Inter-chr p11.23 Transcription factor p21.3 4267 ChimerSeq FusionScan TCGA_RNA-Seq ERC1-WNT5B ERC1 chr12 1250953 + WNT5B chr12 1740463 + Exonic hg19 ESCA TCGA-Z6-A8JD 2 5'UTR-5'UTR Intra-chr p13.33 Seq+ 4268 ChimerSeq FusionScan TCGA_RNA-Seq MAP3K5-UBE3D MAP3K5 chr6 136901438 - UBE3D chr6 83667169 - Exonic hg19 ESCA TCGA-LN-A49M 2 Out-of-Frame Intra-chr q23.3 STE:STE11 q14.1 4269 ChimerSeq FusionScan TCGA_RNA-Seq ATP5J-EBP ATP5J chr21 27107797 - EBP chrX 48382086 + Exonic hg19 ESCA TCGA-LN-A49M 2 5'UTR-5'UTR Inter-chr q21.3 p11.23 4270 ChimerSeq FusionScan TCGA_RNA-Seq ATF6-STX6 ATF6 chr1 161772062 + STX6 chr1 180962561 - Exonic hg19 ESCA TCGA-LN-A49M 2 In-Frame Intra-chr q23.3 Transcription factor q25.3 4271 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57746301 + VMP1 chr17 57915655 + Exonic hg19 ESCA TCGA-LN-A49M 2 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 4272 ChimerSeq FusionScan TCGA_RNA-Seq MICAL3-CECR5 MICAL3 chr22 18304192 - CECR5 chr22 17630635 - Exonic hg19 ESCA TCGA-LN-A49M 2 In-Frame Intra-chr q11.21 4273 ChimerSeq FusionScan TCGA_RNA-Seq ZNF474-COL16A1 ZNF474 chr5 121465378 + COL16A1 chr1 32126720 - Exonic hg19 ESCA TCGA-LN-A49M 2 5'UTR-CDS Inter-chr q23.2 Transcription factor p35.2 4274 ChimerSeq FusionScan TCGA_RNA-Seq ATG2B-CCNL1 ATG2B chr14 96755992 - CCNL1 chr3 156868170 - Exonic hg19 ESCA TCGA-LN-A49M 2 Out-of-Frame Inter-chr q32.2 q25.31 4275 ChimerSeq FusionScan TCGA_RNA-Seq FNBP1-PLOD1 FNBP1 chr9 132687238 - PLOD1 chr1 12017898 + Exonic hg19 ESCA TCGA-LN-A49M 2 In-Frame Inter-chr q34.11 p36.22 4276 ChimerSeq FusionScan TCGA_RNA-Seq LTBR-SCNN1A LTBR chr12 6494545 + SCNN1A chr12 6458571 - Exonic hg19 ESCA TCGA-LN-A49M 2 In-Frame Intra-chr p13.31 p13.31 4277 ChimerSeq FusionScan TCGA_RNA-Seq TMEM241-SERPINB7 TMEM241 chr18 20889643 - SERPINB7 chr18 61449588 + Exonic hg19 ESCA TCGA-L5-A8NL 4 CDS-5'UTR Intra-chr q11.2 q21.33 Seq+ 4278 ChimerSeq FusionScan TCGA_RNA-Seq TANC2-TSHZ2 TANC2 chr17 61396451 + TSHZ2 chr20 52103682 + Exonic hg19 ESCA TCGA-L5-A8NL 3 CDS-3'UTR Inter-chr q23.2 q13.2 Transcription factor Seq+ 4279 ChimerSeq FusionScan TCGA_RNA-Seq BCAS3-SCN4A BCAS3 chr17 59161925 + SCN4A chr17 62038791 - Exonic hg19 ESCA TCGA-L5-A8NL 3 In-Frame Intra-chr q23.2 q23.3 Seq+ 4280 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB44-SNX19 ZBTB44 chr11 130184269 - SNX19 chr11 130776616 - Exonic hg19 ESCA TCGA-L5-A8NL 2 5'UTR-CDS Intra-chr q24.3 Transcription factor q25 4281 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-PSMB3 ERBB2 chr17 37876087 + PSMB3 chr17 36916683 + Exonic hg19 ESCA TCGA-L5-A88V 264 In-Frame Intra-chr q12 Oncogene Seq+ 4282 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-PIP4K2B GRB7 chr17 37898969 + PIP4K2B chr17 36927525 - Exonic hg19 ESCA TCGA-L5-A88V 44 In-Frame Intra-chr q12 q12 Seq+ 4283 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-PSMB3 ERBB2 chr17 37873733 + PSMB3 chr17 36916683 + Exonic hg19 ESCA TCGA-L5-A88V 31 In-Frame Intra-chr q12 Oncogene Seq+ 4284 ChimerSeq FusionScan TCGA_RNA-Seq MED1-STARD3 MED1 chr17 37580879 - STARD3 chr17 37809733 + Exonic hg19 ESCA TCGA-L5-A88V 24 CDS-5'UTR Intra-chr q12 Tumor suppressor gene q12 Seq+ 4285 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF10L-PADI6 ARHGEF10L chr1 17930086 + PADI6 chr1 17714875 + Exonic hg19 ESCA TCGA-L5-A88V 11 In-Frame Intra-chr p36.13 Seq+ 4286 ChimerSeq FusionScan TCGA_RNA-Seq STARD3-FBXL20 STARD3 chr17 37793484 + FBXL20 chr17 37459892 - Exonic hg19 ESCA TCGA-L5-A88V 8 5'UTR-CDS Intra-chr q12 q12 Seq+ 4287 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-PIP4K2B GRB7 chr17 37898709 + PIP4K2B chr17 36927525 - Exonic hg19 ESCA TCGA-L5-A88V 7 Out-of-Frame Intra-chr q12 q12 Seq+ 4288 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-PIP4K2B GRB7 chr17 37894386 + PIP4K2B chr17 36927525 - Exonic hg19 ESCA TCGA-L5-A88V 6 5'UTR-CDS Intra-chr q12 q12 Seq+ 4289 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-PSMB3 ERBB2 chr17 37876087 + PSMB3 chr17 36918663 + Exonic hg19 ESCA TCGA-L5-A88V 5 Out-of-Frame Intra-chr q12 Oncogene Seq+ 4290 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-PIP4K2B GRB7 chr17 37899307 + PIP4K2B chr17 36927525 - Exonic hg19 ESCA TCGA-L5-A88V 3 Out-of-Frame Intra-chr q12 q12 Seq+ 4291 ChimerSeq FusionScan TCGA_RNA-Seq COG3-GTF2F2 COG3 chr13 46039345 + GTF2F2 chr13 45781558 + Exonic hg19 ESCA TCGA-L5-A88V 3 Out-of-Frame Intra-chr q14.13 q14.12 4292 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-PIP4K2B GRB7 chr17 37894645 + PIP4K2B chr17 36927525 - Exonic hg19 ESCA TCGA-L5-A88V 3 5'UTR-CDS Intra-chr q12 q12 Seq+ 4293 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC1-PIP4K2A DNAJC1 chr10 22292141 - PIP4K2A chr10 22880710 - Exonic hg19 ESCA TCGA-L5-A88V 2 In-Frame Intra-chr p12.31 p12.2 4294 ChimerSeq FusionScan TCGA_RNA-Seq MED1-PGAP3 MED1 chr17 37595417 - PGAP3 chr17 37842272 - Exonic hg19 ESCA TCGA-L5-A88V 2 Out-of-Frame Intra-chr q12 Tumor suppressor gene q12 Oncogene 4295 ChimerSeq FusionScan TCGA_RNA-Seq RAC1-AIMP2 RAC1 chr7 6431672 + AIMP2 chr7 6054776 + Exonic hg19 ESCA TCGA-L5-A88V 2 In-Frame Intra-chr p22.1 Oncogene p22.1 Tumor suppressor gene 4296 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57886156 + Exonic hg19 ESCA TCGA-LN-A8HZ 8 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 4297 ChimerSeq FusionScan TCGA_RNA-Seq WWP2-GSG1L WWP2 chr16 69833198 + GSG1L chr16 27856382 - Exonic hg19 ESCA TCGA-LN-A8HZ 6 In-Frame Intra-chr q22.1 p12.1 Seq+ 4298 ChimerSeq FusionScan TCGA_RNA-Seq TAF11-ACOX1 TAF11 chr6 34848065 - ACOX1 chr17 73947045 - Exonic hg19 ESCA TCGA-LN-A8HZ 2 In-Frame Inter-chr p21.31 q25.1 4299 ChimerSeq FusionScan TCGA_RNA-Seq LYPLAL1-GPATCH2 LYPLAL1 chr1 219352588 + GPATCH2 chr1 217688231 - Exonic hg19 ESCA TCGA-LN-A8HZ 2 Out-of-Frame Intra-chr q41 q41 4300 ChimerSeq FusionScan TCGA_RNA-Seq SCAF4-SNX5 SCAF4 chr21 33057361 - SNX5 chr20 17923839 - Exonic hg19 ESCA TCGA-VR-AA7B 2 In-Frame Inter-chr q22.11 p11.23 4301 ChimerSeq FusionScan TCGA_RNA-Seq ZC3H7B-USP49 ZC3H7B chr22 41728231 + USP49 chr6 41774749 - Exonic hg19 ESCA TCGA-VR-AA7B 2 CDS-5'UTR Inter-chr q13.2 p21.1 Seq+ 4302 ChimerSeq FusionScan TCGA_RNA-Seq VRK2-JAG1 VRK2 chr2 58276102 + JAG1 chr20 10639370 - Exonic hg19 ESCA TCGA-VR-AA7B 2 In-Frame Inter-chr p16.1 CK1:VRK p12.2 4303 ChimerSeq FusionScan TCGA_RNA-Seq ZC3H7B-USP49 ZC3H7B chr22 41728231 + USP49 chr6 41774749 - Exonic hg19 ESCA TCGA-VR-AA7B 5 CDS-5'UTR Inter-chr q13.2 p21.1 Seq+ 4304 ChimerSeq FusionScan TCGA_RNA-Seq C7orf10-ARMC10 C7orf10 chr7 40535985 + ARMC10 chr7 102737723 + Exonic hg19 ESCA TCGA-VR-AA7B 2 In-Frame Intra-chr Tumor suppressor gene 4305 ChimerSeq FusionScan TCGA_RNA-Seq VRK2-JAG1 VRK2 chr2 58276102 + JAG1 chr20 10639370 - Exonic hg19 ESCA TCGA-VR-AA7B 2 In-Frame Inter-chr p16.1 CK1:VRK p12.2 4306 ChimerSeq FusionScan TCGA_RNA-Seq SF1-SAGE1 SF1 chr11 64543969 - SAGE1 chrX 134988182 + Exonic hg19 ESCA TCGA-VR-AA7B 2 In-Frame Inter-chr q13.1 q26.3 4307 ChimerSeq FusionScan TCGA_RNA-Seq ZNF148-C21orf37 ZNF148 chr3 125042152 - C21orf37 chr21 18816400 + Exonic hg19 ESCA TCGA-VR-AA7B 2 5'UTR-5'UTR Inter-chr q21.2 Transcription factor 4308 ChimerSeq FusionScan TCGA_RNA-Seq RAB21-SYT10 RAB21 chr12 72167802 + SYT10 chr12 33560291 - Exonic hg19 ESCA TCGA-VR-AA7B 2 Out-of-Frame Intra-chr q21.1 p11.1 4309 ChimerSeq FusionScan TCGA_RNA-Seq SERPINB13-LRIG3 SERPINB13 chr18 61254684 + LRIG3 chr12 59279684 - Exonic hg19 ESCA TCGA-VR-AA7B 2 5'UTR-CDS Inter-chr q21.33 q14.1 Tumor suppressor gene 4310 ChimerSeq FusionScan TCGA_RNA-Seq SCAF4-SNX5 SCAF4 chr21 33057361 - SNX5 chr20 17923839 - Exonic hg19 ESCA TCGA-VR-AA7B 2 In-Frame Inter-chr q22.11 p11.23 4311 ChimerSeq FusionScan TCGA_RNA-Seq TSHZ2-SGK2 TSHZ2 chr20 51589872 + SGK2 chr20 42198024 + Exonic hg19 ESCA TCGA-VR-AA7B 2 Out-of-Frame Intra-chr q13.2 Transcription factor q13.12 AGC:SGK 4312 ChimerSeq FusionScan TCGA_RNA-Seq RAB21-SYT10 RAB21 chr12 72167802 + SYT10 chr12 33538226 - Exonic hg19 ESCA TCGA-VR-AA7B 2 Out-of-Frame Intra-chr q21.1 p11.1 4313 ChimerSeq FusionScan TCGA_RNA-Seq TSHZ2-SGK2 TSHZ2 chr20 51589872 + SGK2 chr20 42199256 + Exonic hg19 ESCA TCGA-VR-AA7B 2 Out-of-Frame Intra-chr q13.2 Transcription factor q13.12 AGC:SGK 4314 ChimerSeq FusionScan TCGA_RNA-Seq SMG5-CCT3 SMG5 chr1 156228795 - CCT3 chr1 156288808 - Exonic hg19 ESCA TCGA-Z6-AAPN 25 In-Frame Intra-chr q22 q22 Seq+ 4315 ChimerSeq FusionScan TCGA_RNA-Seq DNM3-C1orf9 DNM3 chr1 171958288 + C1orf9 chr1 172520651 + Exonic hg19 ESCA TCGA-Z6-AAPN 2 Out-of-Frame Intra-chr q24.3 4316 ChimerSeq FusionScan TCGA_RNA-Seq DHRS7B-PHF14 DHRS7B chr17 21030304 + PHF14 chr7 11150976 + Exonic hg19 ESCA TCGA-Z6-AAPN 2 CDS-5'UTR Inter-chr p11.2 p21.3 4317 ChimerSeq FusionScan TCGA_RNA-Seq CFD-EIF3B CFD chr19 861956 + EIF3B chr7 2411411 + Exonic hg19 ESCA TCGA-L5-A88W 2 In-Frame Inter-chr p13.3 p22.3 4318 ChimerSeq FusionScan TCGA_RNA-Seq HDAC3-DIAPH1 HDAC3 chr5 141004774 - DIAPH1 chr5 140967817 - Exonic hg19 ESCA TCGA-L5-A88W 2 Out-of-Frame Intra-chr q31.3 Tumor suppressor gene q31.3 4319 ChimerSeq FusionScan TCGA_RNA-Seq ZFP36L1-DAGLB ZFP36L1 chr14 69259598 - DAGLB chr7 6450011 - Exonic hg19 ESCA TCGA-L5-A88W 2 In-Frame Inter-chr q24.1 p22.1 4320 ChimerSeq FusionScan TCGA_RNA-Seq HRSP12-LINC00511 HRSP12 chr8 99120873 - LINC00511 chr17 70595283 - Exonic hg19 ESCA TCGA-L5-A4OG 5 CDS-3'UTR Inter-chr q24.3 Seq+ 4321 ChimerSeq FusionScan TCGA_RNA-Seq EIF3J-SORD EIF3J chr15 44829625 + SORD chr15 45332605 + Exonic hg19 ESCA TCGA-L5-A4OG 3 In-Frame Intra-chr q21.1 q21.1 4322 ChimerSeq FusionScan TCGA_RNA-Seq FPGS-SQSTM1 FPGS chr9 130566979 + SQSTM1 chr5 179263435 + Exonic hg19 ESCA TCGA-L5-A4OG 2 Out-of-Frame Inter-chr q34.11 q35.3 4323 ChimerSeq FusionScan TCGA_RNA-Seq ONECUT3-SKIL ONECUT3 chr19 1754853 + SKIL chr3 170077486 + Exonic hg19 ESCA TCGA-L5-A4OG 2 CDS-5'UTR Inter-chr p13.3 Transcription factor q26.2 Tumor suppressor gene Transcription factor 4324 ChimerSeq FusionScan TCGA_RNA-Seq USP9X-PNPLA4 USP9X chrX 40945362 + PNPLA4 chrX 7890139 - Exonic hg19 ESCA TCGA-IG-A3YC 3 5'UTR-5'UTR Intra-chr p11.4 Oncogene p22.31 4325 ChimerSeq FusionScan TCGA_RNA-Seq KRT6A-SPINK5 KRT6A chr12 52884641 - SPINK5 chr5 147465967 + Exonic hg19 ESCA TCGA-IG-A3YC 3 In-Frame Inter-chr q13.13 q32 4326 ChimerSeq FusionScan TCGA_RNA-Seq TRA2A-AGFG2 TRA2A chr7 23547038 - AGFG2 chr7 100146444 + Exonic hg19 ESCA TCGA-IG-A3YC 2 In-Frame Intra-chr p15.3 q22.1 4327 ChimerSeq FusionScan TCGA_RNA-Seq CYTH1-CUX1 CYTH1 chr17 76696412 - CUX1 chr7 101916636 + Exonic hg19 ESCA TCGA-IG-A3YC 2 In-Frame Inter-chr q25.3 q22.1 Tumor suppressor gene Transcription factor 4328 ChimerSeq FusionScan TCGA_RNA-Seq ACSL1-CAPZB ACSL1 chr4 185701485 - CAPZB chr1 19746244 - Exonic hg19 ESCA TCGA-IG-A3YC 2 In-Frame Inter-chr q35.1 p36.13 4329 ChimerSeq FusionScan TCGA_RNA-Seq NR2C2-PARL NR2C2 chr3 14989413 + PARL chr3 183585848 - Exonic hg19 ESCA TCGA-R6-A6Y2 37 5'UTR-CDS Intra-chr p25.1 Tumor suppressor gene Transcription factor q27.1 Seq+ 4330 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHM2-IGF2BP2 PLEKHM2 chr1 16046415 + IGF2BP2 chr3 185410550 - Exonic hg19 ESCA TCGA-R6-A6Y2 14 In-Frame Inter-chr p36.21 q27.2 Seq+ 4331 ChimerSeq FusionScan TCGA_RNA-Seq TAF15-ZNHIT3 TAF15 chr17 34136580 + ZNHIT3 chr17 34848656 + Exonic hg19 ESCA TCGA-R6-A6Y2 7 In-Frame Intra-chr q12 q12 Seq+ 4332 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB17-CROCC ZBTB17 chr1 16299533 - CROCC chr1 17263131 + Exonic hg19 ESCA TCGA-R6-A6Y2 4 5'UTR-CDS Intra-chr p36.13 Transcription factor p36.13 Seq+ 4333 ChimerSeq FusionScan TCGA_RNA-Seq VAPB-FARP1 VAPB chr20 56964573 + FARP1 chr13 98865473 + Exonic hg19 ESCA TCGA-R6-A6Y2 3 5'UTR-5'UTR Inter-chr q13.32 q32.2 4334 ChimerSeq FusionScan TCGA_RNA-Seq ANKHD1-GLS ANKHD1 chr5 139815842 + GLS chr2 191765289 + Exonic hg19 ESCA TCGA-R6-A6Y2 2 Out-of-Frame Inter-chr q31.3 q32.2 Tumor suppressor gene 4335 ChimerSeq FusionScan TCGA_RNA-Seq MALT1-RTKN2 MALT1 chr18 56367823 + RTKN2 chr10 63959620 - Exonic hg19 ESCA TCGA-R6-A6Y2 2 In-Frame Inter-chr q21.32 Oncogene q21.2 4336 ChimerSeq FusionScan TCGA_RNA-Seq MRPL3-TTLL11 MRPL3 chr3 131206523 - TTLL11 chr9 124801647 - Exonic hg19 ESCA TCGA-R6-A6Y2 2 Out-of-Frame Inter-chr q22.1 q33.2 4337 ChimerSeq FusionScan TCGA_RNA-Seq SAMD4A-FBXO38 SAMD4A chr14 55034830 + FBXO38 chr5 147774276 + Exonic hg19 ESCA TCGA-R6-A6Y2 2 CDS-5'UTR Inter-chr q22.2 q32 4338 ChimerSeq FusionScan TCGA_RNA-Seq TAF15-ZNHIT3 TAF15 chr17 34136580 + ZNHIT3 chr17 34842778 + Exonic hg19 ESCA TCGA-R6-A6Y2 2 Out-of-Frame Intra-chr q12 q12 Seq+ 4339 ChimerSeq FusionScan TCGA_RNA-Seq LAMA5-IRF9 LAMA5 chr20 60907427 - IRF9 chr14 24632174 + Exonic hg19 ESCA TCGA-R6-A6Y2 2 In-Frame Inter-chr q13.33 q12 Transcription factor 4340 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0146-C3orf39 KIAA0146 chr8 48203726 + C3orf39 chr3 43123028 - Exonic hg19 ESCA TCGA-Q9-A6FU 24 CDS-5'UTR Inter-chr 4341 ChimerSeq FusionScan TCGA_RNA-Seq GAB1-PPP2R2C GAB1 chr4 144361535 + PPP2R2C chr4 6349737 - Exonic hg19 ESCA TCGA-Q9-A6FU 11 In-Frame Intra-chr q31.21 p16.1 Tumor suppressor gene Seq+ 4342 ChimerSeq FusionScan TCGA_RNA-Seq MEX3D-TCF3 MEX3D chr19 1567462 - TCF3 chr19 1646426 - Exonic hg19 ESCA TCGA-Q9-A6FU 10 Out-of-Frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Transcription factor Seq+ 4343 ChimerSeq FusionScan TCGA_RNA-Seq USP37-TMBIM1 USP37 chr2 219339352 - TMBIM1 chr2 219146904 - Exonic hg19 ESCA TCGA-Q9-A6FU 5 CDS-5'UTR Intra-chr q35 q35 Seq+ 4344 ChimerSeq FusionScan TCGA_RNA-Seq MEX3D-TCF3 MEX3D chr19 1567462 - TCF3 chr19 1632404 - Exonic hg19 ESCA TCGA-Q9-A6FU 2 In-Frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Transcription factor Seq+ 4345 ChimerSeq FusionScan TCGA_RNA-Seq FYB-TTC33 FYB chr5 39219544 - TTC33 chr5 40747121 - Exonic hg19 ESCA TCGA-Q9-A6FU 2 5'UTR-5'UTR Intra-chr p13.1 p13.1 4346 ChimerSeq FusionScan TCGA_RNA-Seq ZDHHC17-NAP1L1 ZDHHC17 chr12 77158109 + NAP1L1 chr12 76461253 - Exonic hg19 ESCA TCGA-Q9-A6FU 2 Out-of-Frame Intra-chr q21.2 q21.2 4347 ChimerSeq FusionScan TCGA_RNA-Seq POLB-XYLT1 POLB chr8 42202537 + XYLT1 chr16 17294511 - Exonic hg19 ESCA TCGA-Q9-A6FU 2 Out-of-Frame Inter-chr p11.21 p12.3 4348 ChimerSeq FusionScan TCGA_RNA-Seq TXNL4B-SMG1 TXNL4B chr16 72122885 - SMG1 chr16 18891041 - Exonic hg19 ESCA TCGA-Q9-A6FU 2 Out-of-Frame Intra-chr q22.2 p12.3 Atypical:PIKK 4349 ChimerSeq FusionScan TCGA_RNA-Seq CASZ1-IPO13 CASZ1 chr1 10704973 - IPO13 chr1 44423648 + Exonic hg19 ESCA TCGA-Q9-A6FU 2 In-Frame Intra-chr p36.22 Transcription factor p34.1 4350 ChimerSeq FusionScan TCGA_RNA-Seq ATP9B-ZNF521 ATP9B chr18 76903860 + ZNF521 chr18 22672045 - Exonic hg19 ESCA TCGA-2H-A9GM 3 Out-of-Frame Intra-chr q11.2 Oncogene Transcription factor 4351 ChimerSeq FusionScan TCGA_RNA-Seq LAMA3-CTIF LAMA3 chr18 21464817 + CTIF chr18 46145908 + Exonic hg19 ESCA TCGA-2H-A9GM 2 CDS-5'UTR Intra-chr q11.2 4352 ChimerSeq FusionScan TCGA_RNA-Seq DOCK7-CHMP1A DOCK7 chr1 63052177 - CHMP1A chr16 89713739 - Exonic hg19 ESCA TCGA-2H-A9GM 2 In-Frame Inter-chr p31.3 q24.3 4353 ChimerSeq FusionScan TCGA_RNA-Seq HIATL1-FBP1 HIATL1 chr9 97137209 + FBP1 chr9 97382773 - Exonic hg19 ESCA TCGA-2H-A9GM 2 Out-of-Frame Intra-chr q22.32 Tumor suppressor gene 4354 ChimerSeq FusionScan TCGA_RNA-Seq HS2ST1-FNBP1L HS2ST1 chr1 87380843 + FNBP1L chr1 93965024 + Exonic hg19 ESCA TCGA-2H-A9GM 2 Out-of-Frame Intra-chr p22.3 p22.1 4355 ChimerSeq FusionScan TCGA_RNA-Seq ZNRF2-PIBF1 ZNRF2 chr7 30402072 + PIBF1 chr13 73482668 + Exonic hg19 ESCA TCGA-2H-A9GM 2 3'UTR-CDS Inter-chr p14.3 q21.33 4356 ChimerSeq FusionScan TCGA_RNA-Seq TNFSF10-LMNA TNFSF10 chr3 172241042 - LMNA chr1 156108278 + Exonic hg19 ESCA TCGA-2H-A9GM 2 In-Frame Inter-chr q26.31 q22 4357 ChimerSeq FusionScan TCGA_RNA-Seq ECHDC1-SNX14 ECHDC1 chr6 127664480 - SNX14 chr6 86284096 - Exonic hg19 ESCA TCGA-2H-A9GM 2 5'UTR-CDS Intra-chr q22.33 q14.3 4358 ChimerSeq FusionScan TCGA_RNA-Seq CTCF-IGJ CTCF chr16 67605167 + IGJ chr4 71527932 - Exonic hg19 ESCA TCGA-2H-A9GM 2 5'UTR-CDS Inter-chr q22.1 Tumor suppressor gene Transcription factor 4359 ChimerSeq FusionScan TCGA_RNA-Seq VCL-ADK VCL chr10 75867112 + ADK chr10 76468078 + Exonic hg19 ESCA TCGA-VR-A8ET 20 Out-of-Frame Intra-chr q22.2 q22.2 Seq+ 4360 ChimerSeq FusionScan TCGA_RNA-Seq LYRM4-RPP40 LYRM4 chr6 5216850 - RPP40 chr6 5002479 - Exonic hg19 ESCA TCGA-VR-A8ET 13 In-Frame Intra-chr p25.1 p25.1 Seq+ 4361 ChimerSeq FusionScan TCGA_RNA-Seq TBK1-RBM48 TBK1 chr12 64889555 + RBM48 chr7 92161717 + Exonic hg19 ESCA TCGA-VR-A8ET 11 Out-of-Frame Inter-chr q14.2 Other:IKK q21.2 Seq+ 4362 ChimerSeq FusionScan TCGA_RNA-Seq YWHAB-STK4 YWHAB chr20 43514527 + STK4 chr20 43703658 + Exonic hg19 ESCA TCGA-VR-A8ET 8 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 4363 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-PHTF2 PTPN12 chr7 77221573 + PHTF2 chr7 77469537 + Exonic hg19 ESCA TCGA-VR-A8ET 6 CDS-5'UTR Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 4364 ChimerSeq FusionScan TCGA_RNA-Seq VCL-ADK VCL chr10 75865111 + ADK chr10 76468078 + Exonic hg19 ESCA TCGA-VR-A8ET 4 In-Frame Intra-chr q22.2 q22.2 Seq+ 4365 ChimerSeq FusionScan TCGA_RNA-Seq YWHAB-STK4 YWHAB chr20 43516383 + STK4 chr20 43703658 + Exonic hg19 ESCA TCGA-VR-A8ET 3 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 4366 ChimerSeq FusionScan TCGA_RNA-Seq IPO7-SRP68 IPO7 chr11 9406394 + SRP68 chr17 74046607 - Exonic hg19 ESCA TCGA-VR-A8ET 2 In-Frame Inter-chr p15.4 q25.1 4367 ChimerSeq FusionScan TCGA_RNA-Seq NMB-ACTR10 NMB chr15 85201226 - ACTR10 chr14 58690339 + Exonic hg19 ESCA TCGA-VR-A8ET 2 In-Frame Inter-chr q25.2 q23.1 4368 ChimerSeq FusionScan TCGA_RNA-Seq FAM134C-AP2B1 FAM134C chr17 40738782 - AP2B1 chr17 34001194 + Exonic hg19 ESCA TCGA-L5-A8NH 12 In-Frame Intra-chr q12 Seq+ 4369 ChimerSeq FusionScan TCGA_RNA-Seq CPT1A-RNFT1 CPT1A chr11 68527036 - RNFT1 chr17 58031507 - Exonic hg19 ESCA TCGA-L5-A8NH 10 In-Frame Inter-chr q13.3 q23.1 Seq+ 4370 ChimerSeq FusionScan TCGA_RNA-Seq CPT1A-RNFT1 CPT1A chr11 68527036 - RNFT1 chr17 58030472 - Exonic hg19 ESCA TCGA-L5-A8NH 9 In-Frame Inter-chr q13.3 q23.1 Seq+ 4371 ChimerSeq FusionScan TCGA_RNA-Seq PTP4A1-NOTCH3 PTP4A1 chr6 64282624 + NOTCH3 chr19 15281636 - Exonic hg19 ESCA TCGA-L5-A8NH 6 5'UTR-CDS Inter-chr q12 p13.12 Oncogene Tumor suppressor gene Seq+ 4372 ChimerSeq FusionScan TCGA_RNA-Seq PTP4A1-NOTCH3 PTP4A1 chr6 64282624 + NOTCH3 chr19 15280981 - Exonic hg19 ESCA TCGA-L5-A8NH 4 5'UTR-CDS Inter-chr q12 p13.12 Oncogene Tumor suppressor gene Seq+ 4373 ChimerSeq FusionScan TCGA_RNA-Seq ZNF696-MED16 ZNF696 chr8 144375235 + MED16 chr19 880148 - Exonic hg19 ESCA TCGA-L5-A8NH 2 In-Frame Inter-chr q24.3 Transcription factor p13.3 4374 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R12A-IRAK3 PPP1R12A chr12 80214553 - IRAK3 chr12 66610950 + Exonic hg19 ESCA TCGA-L5-A8NH 2 Out-of-Frame Intra-chr q21.31 q14.3 TKL:IRAK 4375 ChimerSeq FusionScan TCGA_RNA-Seq DSP-LY86 DSP chr6 7542318 + LY86 chr6 6649857 + Exonic hg19 ESCA TCGA-JY-A6FD 46 Out-of-Frame Intra-chr p24.3 Tumor suppressor gene p25.1 Seq+ 4376 ChimerSeq FusionScan TCGA_RNA-Seq NOV-ENPP2 NOV chr8 120431585 + ENPP2 chr8 120606100 - Exonic hg19 ESCA TCGA-JY-A6FD 21 In-Frame Intra-chr q24.12 Tumor suppressor gene q24.12 Seq+ 4377 ChimerSeq FusionScan TCGA_RNA-Seq MLL2-ARF3 MLL2 chr12 49443464 - ARF3 chr12 49334971 - Exonic hg19 ESCA TCGA-JY-A6FD 12 CDS-5'UTR Intra-chr q13.12 4378 ChimerSeq FusionScan TCGA_RNA-Seq DSP-LY86 DSP chr6 7542318 + LY86 chr6 6654776 + Exonic hg19 ESCA TCGA-JY-A6FD 11 Out-of-Frame Intra-chr p24.3 Tumor suppressor gene p25.1 Seq+ 4379 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R2A-ATCAY PPP2R2A chr8 26151256 + ATCAY chr19 3913755 + Exonic hg19 ESCA TCGA-JY-A6FD 4 Out-of-Frame Inter-chr p21.2 p13.3 Seq+ 4380 ChimerSeq FusionScan TCGA_RNA-Seq MINA-BCL2L13 MINA chr3 97680432 - BCL2L13 chr22 18209442 + Exonic hg19 ESCA TCGA-JY-A6FD 2 In-Frame Inter-chr q11.21 4381 ChimerSeq FusionScan TCGA_RNA-Seq PTPN13-AFF1 PTPN13 chr4 87556524 + AFF1 chr4 87869649 + Exonic hg19 ESCA TCGA-JY-A6FD 2 CDS-5'UTR Intra-chr q21.3 Tumor suppressor gene q21.3 Oncogene Seq+ 4382 ChimerSeq FusionScan TCGA_RNA-Seq TMEM91-PHLDB1 TMEM91 chr19 41884424 + PHLDB1 chr11 118501923 + Exonic hg19 ESCA TCGA-JY-A6FD 2 In-Frame Inter-chr q13.2 q23.3 4383 ChimerSeq FusionScan TCGA_RNA-Seq MAP1S-CEACAM6 MAP1S chr19 17835017 + CEACAM6 chr19 42270090 + Exonic hg19 ESCA TCGA-L5-A891 50 Out-of-Frame Intra-chr p13.11 q13.2 Seq+ 4384 ChimerSeq FusionScan TCGA_RNA-Seq MAP1S-CEACAM6 MAP1S chr19 17831846 + CEACAM6 chr19 42270090 + Exonic hg19 ESCA TCGA-L5-A891 24 In-Frame Intra-chr p13.11 q13.2 Seq+ 4385 ChimerSeq FusionScan TCGA_RNA-Seq ARID3A-PRPF31 ARID3A chr19 932742 + PRPF31 chr19 54634737 + Exonic hg19 ESCA TCGA-L5-A891 17 In-Frame Intra-chr p13.3 Transcription factor Seq+ 4386 ChimerSeq FusionScan TCGA_RNA-Seq B9D2-REEP6 B9D2 chr19 41869336 - REEP6 chr19 1495292 + Exonic hg19 ESCA TCGA-L5-A891 13 In-Frame Intra-chr q13.2 p13.3 Seq+ 4387 ChimerSeq FusionScan TCGA_RNA-Seq FBXO46-ZNF90 FBXO46 chr19 46234106 - ZNF90 chr19 20216029 + Exonic hg19 ESCA TCGA-L5-A891 12 5'UTR-CDS Intra-chr q13.32 p12 Transcription factor Seq+ 4388 ChimerSeq FusionScan TCGA_RNA-Seq DAZAP1-ZNF226 DAZAP1 chr19 1422395 + ZNF226 chr19 44679136 + Exonic hg19 ESCA TCGA-L5-A891 9 In-Frame Intra-chr p13.3 q13.31 Transcription factor Seq+ 4389 ChimerSeq FusionScan TCGA_RNA-Seq MAP1S-CEACAM6 MAP1S chr19 17835017 + CEACAM6 chr19 42274706 + Exonic hg19 ESCA TCGA-L5-A891 7 CDS-3'UTR Intra-chr p13.11 q13.2 Seq+ 4390 ChimerSeq FusionScan TCGA_RNA-Seq GIPR-RBM42 GIPR chr19 46173992 + RBM42 chr19 36128059 + Exonic hg19 ESCA TCGA-L5-A891 6 In-Frame Intra-chr q13.32 q13.12 Seq+ 4391 ChimerSeq FusionScan TCGA_RNA-Seq OLA1-GPR155 OLA1 chr2 175087760 - GPR155 chr2 175326400 - Exonic hg19 ESCA TCGA-L5-A891 5 In-Frame Intra-chr q31.1 q31.1 Seq+ 4392 ChimerSeq FusionScan TCGA_RNA-Seq ZNF295-TFF1 ZNF295 chr21 43430360 - TFF1 chr21 43783516 - Exonic hg19 ESCA TCGA-L5-A891 5 5'UTR-CDS Intra-chr q22.3 Seq+ 4393 ChimerSeq FusionScan TCGA_RNA-Seq ELL-MKNK2 ELL chr19 18569014 - MKNK2 chr19 2046690 - Exonic hg19 ESCA TCGA-L5-A891 4 Out-of-Frame Intra-chr p13.11 p13.3 Seq+ 4394 ChimerSeq FusionScan TCGA_RNA-Seq CARM1-PLA2G4C CARM1 chr19 10982598 + PLA2G4C chr19 48558306 - Exonic hg19 ESCA TCGA-L5-A891 4 Out-of-Frame Intra-chr p13.2 q13.33 Seq+ 4395 ChimerSeq FusionScan TCGA_RNA-Seq GATAD2A-ZNF350 GATAD2A chr19 19496947 + ZNF350 chr19 52477784 - Exonic hg19 ESCA TCGA-L5-A891 4 5'UTR-5'UTR Intra-chr p13.11 Transcription factor q13.41 Transcription factor Seq+ 4396 ChimerSeq FusionScan TCGA_RNA-Seq PRKD2-KLHL26 PRKD2 chr19 47204055 - KLHL26 chr19 18778473 + Exonic hg19 ESCA TCGA-L5-A891 3 In-Frame Intra-chr q13.32 p13.11 Seq+ 4397 ChimerSeq FusionScan TCGA_RNA-Seq HKR1-CEACAM7 HKR1 chr19 37838774 + CEACAM7 chr19 42191152 - Exonic hg19 ESCA TCGA-L5-A891 3 In-Frame Intra-chr q13.12 Transcription factor Seq+ 4398 ChimerSeq FusionScan TCGA_RNA-Seq SNX8-MAD1L1 SNX8 chr7 2353962 - MAD1L1 chr7 2054277 - Exonic hg19 ESCA TCGA-L5-A891 3 Out-of-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 4399 ChimerSeq FusionScan TCGA_RNA-Seq ASXL1-TPX2 ASXL1 chr20 30956926 + TPX2 chr20 30359362 + Exonic hg19 ESCA TCGA-L5-A891 3 Out-of-Frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 4400 ChimerSeq FusionScan TCGA_RNA-Seq WASF2-FGR WASF2 chr1 27816496 - FGR chr1 27951662 - Exonic hg19 ESCA TCGA-L5-A891 3 5'UTR-5'UTR Intra-chr p36.11 p35.3 TK:Src Seq+ 4401 ChimerSeq FusionScan TCGA_RNA-Seq PIP5K1B-PGM5 PIP5K1B chr9 71491710 + PGM5 chr9 71094333 + Exonic hg19 ESCA TCGA-L5-A891 2 Out-of-Frame Intra-chr q21.11 q21.11 Seq+ 4402 ChimerSeq FusionScan TCGA_RNA-Seq TMEM38A-PPP5C TMEM38A chr19 16772152 + PPP5C chr19 46878860 + Exonic hg19 ESCA TCGA-L5-A891 2 Out-of-Frame Intra-chr p13.11 q13.32 4403 ChimerSeq FusionScan TCGA_RNA-Seq MAP1S-CEACAM6 MAP1S chr19 17831846 + CEACAM6 chr19 42274706 + Exonic hg19 ESCA TCGA-L5-A891 2 CDS-3'UTR Intra-chr p13.11 q13.2 Seq+ 4404 ChimerSeq FusionScan TCGA_RNA-Seq SIM2-MORC3 SIM2 chr21 38103452 + MORC3 chr21 37721608 + Exonic hg19 ESCA TCGA-L5-A891 2 Out-of-Frame Intra-chr q22.13 Transcription factor q22.12 Seq+ 4405 ChimerSeq FusionScan TCGA_RNA-Seq CARD8-MYH14 CARD8 chr19 48759048 - MYH14 chr19 50752243 + Exonic hg19 ESCA TCGA-L5-A891 2 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 4406 ChimerSeq FusionScan TCGA_RNA-Seq KANSL1-NME1 KANSL1 chr17 44248220 - NME1 chr17 49233011 + Exonic hg19 ESCA TCGA-L5-A891 2 In-Frame Intra-chr q21.33 Tumor suppressor gene 4407 ChimerSeq FusionScan TCGA_RNA-Seq RAD54L-HGS RAD54L chr1 46725771 + HGS chr17 79662815 + Exonic hg19 ESCA TCGA-L5-A891 2 Out-of-Frame Inter-chr p34.1 q25.3 4408 ChimerSeq FusionScan TCGA_RNA-Seq ZNF542-ANGPTL6 ZNF542 chr19 56880305 + ANGPTL6 chr19 10205614 - Exonic hg19 ESCA TCGA-L5-A891 2 5'UTR-CDS Intra-chr p13.2 Seq+ 4409 ChimerSeq FusionScan TCGA_RNA-Seq LSR-NLRP2 LSR chr19 35741562 + NLRP2 chr19 55481366 + Exonic hg19 ESCA TCGA-L5-A891 2 CDS-5'UTR Intra-chr q13.12 Seq+ 4410 ChimerSeq FusionScan TCGA_RNA-Seq ZNF790-C19orf45 ZNF790 chr19 37340903 - C19orf45 chr19 7570209 + Exonic hg19 ESCA TCGA-L5-A891 2 5'UTR-CDS Intra-chr q13.12 Transcription factor Seq+ 4411 ChimerSeq FusionScan TCGA_RNA-Seq CAPZA1-CLCC1 CAPZA1 chr1 113162505 + CLCC1 chr1 109490340 - Exonic hg19 ESCA TCGA-L5-A891 2 In-Frame Intra-chr p13.2 p13.3 4412 ChimerSeq FusionScan TCGA_RNA-Seq PTPRS-MBD3 PTPRS chr19 5211600 - MBD3 chr19 1582711 - Exonic hg19 ESCA TCGA-L5-A891 2 Out-of-Frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 4413 ChimerSeq FusionScan TCGA_RNA-Seq NT5C3-KBTBD2 NT5C3 chr7 33102179 - KBTBD2 chr7 32919554 - Exonic hg19 ESCA TCGA-L5-A891 2 5'UTR-5'UTR Intra-chr p14.3 4414 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R13L-MBOAT7 PPP1R13L chr19 45885784 - MBOAT7 chr19 54678125 - Exonic hg19 ESCA TCGA-L5-A891 2 Out-of-Frame Intra-chr q13.32 Seq+ 4415 ChimerSeq FusionScan TCGA_RNA-Seq PXN-PLA2G1B PXN chr12 120703419 - PLA2G1B chr12 120763823 - Exonic hg19 ESCA TCGA-L5-A891 2 In-Frame Intra-chr q24.23 q24.31 Seq+ 4416 ChimerSeq FusionScan TCGA_RNA-Seq SCAP-C19orf53 SCAP chr3 47484361 - C19orf53 chr19 13888865 + Exonic hg19 ESCA TCGA-L5-A891 2 Out-of-Frame Inter-chr p21.31 p13.13 4417 ChimerSeq FusionScan TCGA_RNA-Seq ZNF542-ANGPTL6 ZNF542 chr19 56880706 + ANGPTL6 chr19 10205614 - Exonic hg19 ESCA TCGA-L5-A891 2 5'UTR-CDS Intra-chr p13.2 Seq+ 4418 ChimerSeq FusionScan TCGA_RNA-Seq FBXO46-ZNF92 FBXO46 chr19 46234106 - ZNF92 chr7 64853718 + Exonic hg19 ESCA TCGA-L5-A891 2 5'UTR-5'UTR Inter-chr q13.32 q11.21 Transcription factor 4419 ChimerSeq FusionScan TCGA_RNA-Seq RASSF8-CASC1 RASSF8 chr12 26148063 + CASC1 chr12 25308346 - Exonic hg19 ESCA TCGA-Z6-A8JE 5 5'UTR-CDS Intra-chr p12.1 Tumor suppressor gene p12.1 Tumor suppressor gene Seq+ 4420 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPF-ANKLE2 HNRNPF chr10 43904578 - ANKLE2 chr12 133331719 - Exonic hg19 ESCA TCGA-Z6-A8JE 2 5'UTR-CDS Inter-chr q11.21 q24.33 4421 ChimerSeq FusionScan TCGA_RNA-Seq GNA12-PERP GNA12 chr7 2834561 - PERP chr6 138413405 - Exonic hg19 ESCA TCGA-Z6-A8JE 2 Out-of-Frame Inter-chr p22.2 q23.3 4422 ChimerSeq FusionScan TCGA_RNA-Seq METTL21B-LANCL1 METTL21B chr12 58166911 + LANCL1 chr2 211341136 - Exonic hg19 ESCA TCGA-Z6-A8JE 2 CDS-5'UTR Inter-chr q34 4423 ChimerSeq FusionScan TCGA_RNA-Seq FAF1-FNBP1L FAF1 chr1 51425438 - FNBP1L chr1 93965024 + Exonic hg19 ESCA TCGA-Z6-A8JE 2 In-Frame Intra-chr p32.3 p22.1 4424 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP11A-CHRFAM7A ARHGAP11A chr15 32921003 + CHRFAM7A chr15 30675585 - Exonic hg19 ESCA TCGA-Z6-A8JE 2 CDS-5'UTR Intra-chr 4425 ChimerSeq FusionScan TCGA_RNA-Seq GRHL2-CDC42 GRHL2 chr8 102505017 + CDC42 chr1 22404921 + Exonic hg19 ESCA TCGA-Z6-A8JE 2 CDS-5'UTR Inter-chr q22.3 Transcription factor p36.12 4426 ChimerSeq FusionScan TCGA_RNA-Seq STK3-COX6C STK3 chr8 99718694 - COX6C chr8 100899846 - Exonic hg19 ESCA TCGA-L5-A4OT 7 In-Frame Intra-chr q22.2 q22.2 Seq+ 4427 ChimerSeq FusionScan TCGA_RNA-Seq VCL-C10orf11 VCL chr10 75802911 + C10orf11 chr10 77795765 + Exonic hg19 ESCA TCGA-L5-A4OT 3 In-Frame Intra-chr q22.2 Seq+ 4428 ChimerSeq FusionScan TCGA_RNA-Seq MAPKAPK5-TRAFD1 MAPKAPK5 chr12 112308984 + TRAFD1 chr12 112568314 + Exonic hg19 ESCA TCGA-L5-A4OT 2 CDS-5'UTR Intra-chr q24.12 CAMK:MAPKAPK q24.13 Transcription factor Seq+ 4429 ChimerSeq FusionScan TCGA_RNA-Seq MAPKAPK5-TRAFD1 MAPKAPK5 chr12 112308984 + TRAFD1 chr12 112572541 + Exonic hg19 ESCA TCGA-L5-A4OT 2 Out-of-Frame Intra-chr q24.12 CAMK:MAPKAPK q24.13 Transcription factor Seq+ 4430 ChimerSeq FusionScan TCGA_RNA-Seq TBCK-GSTCD TBCK chr4 107092251 - GSTCD chr4 106755617 + Exonic hg19 ESCA TCGA-L5-A4OT 2 In-Frame Intra-chr q24 Other:TBCK q24 4431 ChimerSeq FusionScan TCGA_RNA-Seq C6orf123-BCAT2 C6orf123 chr6 168187993 - BCAT2 chr19 49298721 - Exonic hg19 ESCA TCGA-L5-A4OT 2 3'UTR-3'UTR Inter-chr q13.33 4432 ChimerSeq FusionScan TCGA_RNA-Seq RSF1-PAK1 RSF1 chr11 77531573 - PAK1 chr11 77103586 - Exonic hg19 ESCA TCGA-L5-A4OT 2 CDS-5'UTR Intra-chr q14.1 q14.1 STE:STE20 Seq+ 4433 ChimerSeq FusionScan TCGA_RNA-Seq TNS4-WIPF2 TNS4 chr17 38636951 - WIPF2 chr17 38412642 + Exonic hg19 ESCA TCGA-2H-A9GI 9 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 4434 ChimerSeq FusionScan TCGA_RNA-Seq YTHDC1-GAK YTHDC1 chr4 69215443 - GAK chr4 891946 - Exonic hg19 ESCA TCGA-2H-A9GI 4 In-Frame Intra-chr p16.3 Other:NAK Seq+ 4435 ChimerSeq FusionScan TCGA_RNA-Seq MAN2B1-FBXW9 MAN2B1 chr19 12759949 - FBXW9 chr19 12802268 - Exonic hg19 ESCA TCGA-2H-A9GI 4 In-Frame Intra-chr p13.13 p13.13 Seq+ 4436 ChimerSeq FusionScan TCGA_RNA-Seq SPOP-IKZF3 SPOP chr17 47696342 - IKZF3 chr17 37988404 - Exonic hg19 ESCA TCGA-2H-A9GI 2 Out-of-Frame Intra-chr q21.33 Oncogene Tumor suppressor gene q21.1 Tumor suppressor gene Transcription factor 4437 ChimerSeq FusionScan TCGA_RNA-Seq RB1-ITM2B RB1 chr13 48955579 + ITM2B chr13 48827943 + Exonic hg19 ESCA TCGA-2H-A9GI 2 In-Frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Seq+ 4438 ChimerSeq FusionScan TCGA_RNA-Seq B4GALT5-STAU1 B4GALT5 chr20 48330112 - STAU1 chr20 47790806 - Exonic hg19 ESCA TCGA-2H-A9GI 2 CDS-5'UTR Intra-chr q13.13 q13.13 4439 ChimerSeq FusionScan TCGA_RNA-Seq EPS15L1-UBB EPS15L1 chr19 16582723 - UBB chr17 16285215 + Exonic hg19 ESCA TCGA-2H-A9GI 2 CDS-5'UTR Inter-chr p13.11 p11.2 4440 ChimerSeq FusionScan TCGA_RNA-Seq TNS4-WIPF2 TNS4 chr17 38635925 - WIPF2 chr17 38412642 + Exonic hg19 ESCA TCGA-2H-A9GI 2 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 4441 ChimerSeq FusionScan TCGA_RNA-Seq AGFG1-C1orf63 AGFG1 chr2 228389631 + C1orf63 chr1 25573520 - Exonic hg19 ESCA TCGA-2H-A9GI 2 CDS-5'UTR Inter-chr q36.3 4442 ChimerSeq FusionScan TCGA_RNA-Seq SMG5-CCT3 SMG5 chr1 156228795 - CCT3 chr1 156288808 - Exonic hg19 ESCA TCGA-Z6-AAPN 42 In-Frame Intra-chr q22 q22 Seq+ 4443 ChimerSeq FusionScan TCGA_RNA-Seq EXT1-TSNARE1 EXT1 chr8 119122323 - TSNARE1 chr8 143293674 - Exonic hg19 ESCA TCGA-Z6-AAPN 4 CDS-3'UTR Intra-chr q24.11 Oncogene Tumor suppressor gene q24.3 Seq+ 4444 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP11A-CHRFAM7A ARHGAP11A chr15 32921003 + CHRFAM7A chr15 30675585 - Exonic hg19 ESCA TCGA-Z6-AAPN 2 CDS-5'UTR Intra-chr 4445 ChimerSeq FusionScan TCGA_RNA-Seq DHRS7B-PHF14 DHRS7B chr17 21030304 + PHF14 chr7 11150976 + Exonic hg19 ESCA TCGA-Z6-AAPN 2 CDS-5'UTR Inter-chr p11.2 p21.3 4446 ChimerSeq FusionScan TCGA_RNA-Seq BICD2-IPPK BICD2 chr9 95477534 - IPPK chr9 95420963 - Exonic hg19 ESCA TCGA-Z6-AAPN 2 In-Frame Intra-chr q22.31 q22.31 4447 ChimerSeq FusionScan TCGA_RNA-Seq DNM3-C1orf9 DNM3 chr1 171958288 + C1orf9 chr1 172520651 + Exonic hg19 ESCA TCGA-Z6-AAPN 2 Out-of-Frame Intra-chr q24.3 4448 ChimerSeq FusionScan TCGA_RNA-Seq ZDHHC4-LAMA3 ZDHHC4 chr7 6621882 + LAMA3 chr18 21422358 + Exonic hg19 ESCA TCGA-Z6-AAPN 2 Out-of-Frame Inter-chr p22.1 q11.2 4449 ChimerSeq FusionScan TCGA_RNA-Seq DECR1-STAU2 DECR1 chr8 91013789 + STAU2 chr8 74464554 - Exonic hg19 ESCA TCGA-2H-A9GG 40 Out-of-Frame Intra-chr q21.3 q21.11 Seq+ 4450 ChimerSeq FusionScan TCGA_RNA-Seq RUNX1T1-ZC2HC1A RUNX1T1 chr8 93115084 - ZC2HC1A chr8 79590797 + Exonic hg19 ESCA TCGA-2H-A9GG 19 Out-of-Frame Intra-chr q21.3 Oncogene q21.13 Seq+ 4451 ChimerSeq FusionScan TCGA_RNA-Seq NFIX-DOCK6 NFIX chr19 13136366 + DOCK6 chr19 11364402 - Exonic hg19 ESCA TCGA-2H-A9GG 14 Out-of-Frame Intra-chr p13.13 Transcription factor p13.2 Seq+ 4452 ChimerSeq FusionScan TCGA_RNA-Seq POU2F1-MAEL POU2F1 chr1 167190195 + MAEL chr1 166973416 + Exonic hg19 ESCA TCGA-2H-A9GG 13 In-Frame Intra-chr q24.2 Transcription factor q24.1 Seq+ 4453 ChimerSeq FusionScan TCGA_RNA-Seq RUNX1T1-ZC2HC1A RUNX1T1 chr8 93088192 - ZC2HC1A chr8 79590797 + Exonic hg19 ESCA TCGA-2H-A9GG 12 Out-of-Frame Intra-chr q21.3 Oncogene q21.13 Seq+ 4454 ChimerSeq FusionScan TCGA_RNA-Seq RUNX1T1-ZC2HC1A RUNX1T1 chr8 93107255 - ZC2HC1A chr8 79590797 + Exonic hg19 ESCA TCGA-2H-A9GG 10 Out-of-Frame Intra-chr q21.3 Oncogene q21.13 Seq+ 4455 ChimerSeq FusionScan TCGA_RNA-Seq DOCK6-NFIX DOCK6 chr19 11373072 - NFIX chr19 13183860 + Exonic hg19 ESCA TCGA-2H-A9GG 9 Out-of-Frame Intra-chr p13.2 p13.13 Transcription factor Seq+ 4456 ChimerSeq FusionScan TCGA_RNA-Seq RUNX1T1-ZC2HC1A RUNX1T1 chr8 93074773 - ZC2HC1A chr8 79590797 + Exonic hg19 ESCA TCGA-2H-A9GG 9 Out-of-Frame Intra-chr q21.3 Oncogene q21.13 Seq+ 4457 ChimerSeq FusionScan TCGA_RNA-Seq RHOT2-RAB11FIP3 RHOT2 chr16 718699 + RAB11FIP3 chr16 521294 + Exonic hg19 ESCA TCGA-2H-A9GG 6 Out-of-Frame Intra-chr p13.3 Seq+ 4458 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-TMEM67 PVT1 chr8 128806980 + TMEM67 chr8 94807636 + Exonic hg19 ESCA TCGA-2H-A9GG 5 5'UTR-5'UTR Intra-chr q24.21 q22.1 Seq+ 4459 ChimerSeq FusionScan TCGA_RNA-Seq HOXA10-CSN1S1 HOXA10 chr7 27212967 - CSN1S1 chr4 70798261 + Exonic hg19 ESCA TCGA-2H-A9GG 5 CDS-5'UTR Inter-chr p15.2 Transcription factor q13.3 Seq+ 4460 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-TMEM67 PVT1 chr8 128806980 + TMEM67 chr8 94808128 + Exonic hg19 ESCA TCGA-2H-A9GG 5 5'UTR-5'UTR Intra-chr q24.21 q22.1 Seq+ 4461 ChimerSeq FusionScan TCGA_RNA-Seq PIEZO1-CBFA2T3 PIEZO1 chr16 88815791 - CBFA2T3 chr16 88968064 - Exonic hg19 ESCA TCGA-2H-A9GG 4 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene Seq+ 4462 ChimerSeq FusionScan TCGA_RNA-Seq TMEM106A-ATP6V0A1 TMEM106A chr17 41365910 + ATP6V0A1 chr17 40665878 + Exonic hg19 ESCA TCGA-2H-A9GG 3 Out-of-Frame Intra-chr q21.31 q21.2 4463 ChimerSeq FusionScan TCGA_RNA-Seq ASPSCR1-MRPL12 ASPSCR1 chr17 79943483 + MRPL12 chr17 79673935 + Exonic hg19 ESCA TCGA-2H-A9GG 3 Out-of-Frame Intra-chr q25.3 q25.3 4464 ChimerSeq FusionScan TCGA_RNA-Seq ZNF696-CHRAC1 ZNF696 chr8 144375235 + CHRAC1 chr8 141524467 + Exonic hg19 ESCA TCGA-2H-A9GG 2 Out-of-Frame Intra-chr q24.3 Transcription factor q24.3 4465 ChimerSeq FusionScan TCGA_RNA-Seq MAD1L1-PRKAR1B MAD1L1 chr7 2108828 - PRKAR1B chr7 591107 - Exonic hg19 ESCA TCGA-2H-A9GG 2 In-Frame Intra-chr p22.3 Tumor suppressor gene p22.3 4466 ChimerSeq FusionScan TCGA_RNA-Seq ACP6-BCL9 ACP6 chr1 147120047 - BCL9 chr1 147090621 + Exonic hg19 ESCA TCGA-2H-A9GG 2 In-Frame Intra-chr q21.2 q21.2 Oncogene 4467 ChimerSeq FusionScan TCGA_RNA-Seq SORT1-CINP SORT1 chr1 109878861 - CINP chr14 102816385 - Exonic hg19 ESCA TCGA-2H-A9GG 2 In-Frame Inter-chr p13.3 q32.31 4468 ChimerSeq FusionScan TCGA_RNA-Seq ST18-RB1CC1 ST18 chr8 53142591 - RB1CC1 chr8 53543088 - Exonic hg19 ESCA TCGA-2H-A9GG 2 5'UTR-CDS Intra-chr q11.23 Transcription factor q11.23 Tumor suppressor gene 4469 ChimerSeq FusionScan TCGA_RNA-Seq GALNT13-LAPTM4A GALNT13 chr2 154728816 + LAPTM4A chr2 20240772 - Exonic hg19 ESCA TCGA-2H-A9GG 2 5'UTR-CDS Intra-chr q23.3 p24.1 4470 ChimerSeq FusionScan TCGA_RNA-Seq CIR1-GPR155 CIR1 chr2 175243650 - GPR155 chr2 175304763 - Exonic hg19 ESCA TCGA-2H-A9GG 2 Out-of-Frame Intra-chr q31.1 q31.1 4471 ChimerSeq FusionScan TCGA_RNA-Seq RUNX1T1-ZC2HC1A RUNX1T1 chr8 93093461 - ZC2HC1A chr8 79590797 + Exonic hg19 ESCA TCGA-2H-A9GG 2 5'UTR-CDS Intra-chr q21.3 Oncogene q21.13 Seq+ 4472 ChimerSeq FusionScan TCGA_RNA-Seq RB1-ITM2B RB1 chr13 48881542 + ITM2B chr13 48827943 + Exonic hg19 ESCA TCGA-LN-A4A6 3 In-Frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Seq+ 4473 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175394270 - Exonic hg19 ESCA TCGA-LN-A4A6 3 5'UTR-CDS Inter-chr q21.1 q35.2 4474 ChimerSeq FusionScan TCGA_RNA-Seq PDS5A-UBE2K PDS5A chr4 39978059 - UBE2K chr4 39776453 + Exonic hg19 ESCA TCGA-LN-A4A6 2 Out-of-Frame Intra-chr p14 p14 4475 ChimerSeq FusionScan TCGA_RNA-Seq CHST8-NOTCH2NL CHST8 chr19 34113202 + NOTCH2NL chr1 145248812 + Exonic hg19 ESCA TCGA-LN-A4A6 2 5'UTR-5'UTR Inter-chr q13.11 q21.1 4476 ChimerSeq FusionScan TCGA_RNA-Seq FZD6-EIF3E FZD6 chr8 104312512 + EIF3E chr8 109254142 - Exonic hg19 ESCA TCGA-LN-A4A6 2 In-Frame Intra-chr q22.3 q23.1 4477 ChimerSeq FusionScan TCGA_RNA-Seq RAD51-HNRNPH1 RAD51 chr15 41011097 + HNRNPH1 chr5 179043959 - Exonic hg19 ESCA TCGA-LN-A4A6 2 Out-of-Frame Inter-chr q15.1 q35.3 4478 ChimerSeq FusionScan TCGA_RNA-Seq USP13-SKIL USP13 chr3 179371181 + SKIL chr3 170077486 + Exonic hg19 ESCA TCGA-LN-A4A6 2 CDS-5'UTR Intra-chr q26.33 q26.2 Tumor suppressor gene Transcription factor 4479 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57721844 + VMP1 chr17 57895072 + Exonic hg19 ESCA TCGA-R6-A6DQ 14 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 4480 ChimerSeq FusionScan TCGA_RNA-Seq UBP1-TFCP2L1 UBP1 chr3 33453072 - TFCP2L1 chr2 122004546 - Exonic hg19 ESCA TCGA-R6-A6DQ 2 In-Frame Inter-chr p22.3 Transcription factor q14.2 Transcription factor 4481 ChimerSeq FusionScan TCGA_RNA-Seq PTBP1-SH3GL1 PTBP1 chr19 799443 + SH3GL1 chr19 4364218 - Exonic hg19 ESCA TCGA-R6-A6DQ 2 Out-of-Frame Intra-chr p13.3 p13.3 4482 ChimerSeq FusionScan TCGA_RNA-Seq MYO10-PFN2 MYO10 chr5 16877717 - PFN2 chr3 149686337 - Exonic hg19 ESCA TCGA-R6-A6DQ 2 In-Frame Inter-chr p15.1 q25.1 4483 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57756880 + VMP1 chr17 57886156 + Exonic hg19 ESCA TCGA-R6-A6KZ 9 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 4484 ChimerSeq FusionScan TCGA_RNA-Seq CTBP2-TLX1NB CTBP2 chr10 126848887 - TLX1NB chr10 102886855 - Exonic hg19 ESCA TCGA-R6-A6KZ 5 5'UTR-5'UTR Intra-chr q26.13 q24.31 Seq+ 4485 ChimerSeq FusionScan TCGA_RNA-Seq APLP2-OPCML APLP2 chr11 129939977 + OPCML chr11 132307253 - Exonic hg19 ESCA TCGA-R6-A6KZ 3 Out-of-Frame Intra-chr q24.3 q25 Tumor suppressor gene Seq+ 4486 ChimerSeq FusionScan TCGA_RNA-Seq NDE1-BCAR4 NDE1 chr16 15744151 + BCAR4 chr16 11914154 - Exonic hg19 ESCA TCGA-R6-A6KZ 2 5'UTR-3'UTR Intra-chr p13.11 p13.13 4487 ChimerSeq FusionScan TCGA_RNA-Seq TFG-CCDC14 TFG chr3 100463775 + CCDC14 chr3 123667979 - Exonic hg19 ESCA TCGA-R6-A6KZ 2 In-Frame Intra-chr q12.2 q21.1 4488 ChimerSeq FusionScan TCGA_RNA-Seq CLPB-GOLGA8B CLPB chr11 72069923 - GOLGA8B chr15 34846157 - Exonic hg19 ESCA TCGA-LN-A49W 9 CDS-3'UTR Inter-chr q13.4 q14 Seq+ 4489 ChimerSeq FusionScan TCGA_RNA-Seq CLPB-GOLGA8A CLPB chr11 72069923 - GOLGA8A chr15 34699936 - Exonic hg19 ESCA TCGA-LN-A49W 9 CDS-3'UTR Inter-chr q13.4 q14 Seq+ 4490 ChimerSeq FusionScan TCGA_RNA-Seq SLTM-LPHN1 SLTM chr15 59224554 - LPHN1 chr19 14288556 - Exonic hg19 ESCA TCGA-LN-A49W 5 In-Frame Inter-chr q22.1 Seq+ 4491 ChimerSeq FusionScan TCGA_RNA-Seq C11orf49-LRRC4C C11orf49 chr11 47008861 + LRRC4C chr11 40955273 - Exonic hg19 ESCA TCGA-LN-A49W 4 CDS-5'UTR Intra-chr p11.2 p12 4492 ChimerSeq FusionScan TCGA_RNA-Seq DICER1-SERPINA12 DICER1 chr14 95590532 - SERPINA12 chr14 94982491 - Exonic hg19 ESCA TCGA-LN-A49W 3 CDS-5'UTR Intra-chr q32.13 Oncogene Tumor suppressor gene q32.13 4493 ChimerSeq FusionScan TCGA_RNA-Seq PDIA3-SF3B1 PDIA3 chr15 44059108 + SF3B1 chr2 198257912 - Exonic hg19 ESCA TCGA-LN-A49W 2 In-Frame Inter-chr q15.3 q33.1 Oncogene 4494 ChimerSeq FusionScan TCGA_RNA-Seq TMED3-ST20 TMED3 chr15 79606347 + ST20 chr15 80191467 - Exonic hg19 ESCA TCGA-LN-A49W 2 In-Frame Intra-chr q25.1 q25.1 Tumor suppressor gene 4495 ChimerSeq FusionScan TCGA_RNA-Seq CNOT4-EYS CNOT4 chr7 135122905 - EYS chr6 65336138 - Exonic hg19 ESCA TCGA-LN-A49W 2 Out-of-Frame Inter-chr q33 q12 4496 ChimerSeq FusionScan TCGA_RNA-Seq ACO1-NFIB ACO1 chr9 32384733 + NFIB chr9 14155892 - Exonic hg19 ESCA TCGA-LN-A49W 2 5'UTR-CDS Intra-chr p21.1 p22.3 Transcription factor 4497 ChimerSeq FusionScan TCGA_RNA-Seq CARS-SLC22A18AS CARS chr11 3028108 - SLC22A18AS chr11 2909865 - Exonic hg19 ESCA TCGA-L5-A4OF 28 Out-of-Frame Intra-chr Seq+ 4498 ChimerSeq FusionScan TCGA_RNA-Seq PPP6R2-SBF1 PPP6R2 chr22 50781979 + SBF1 chr22 50887079 - Exonic hg19 ESCA TCGA-L5-A4OF 17 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 4499 ChimerSeq FusionScan TCGA_RNA-Seq SNRPD1-OSBPL1A SNRPD1 chr18 19192404 + OSBPL1A chr18 21957499 - Exonic hg19 ESCA TCGA-L5-A4OF 8 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 4500 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175388437 - Exonic hg19 ESCA TCGA-L5-A4OF 7 5'UTR-CDS Inter-chr q21.1 q35.2 4501 ChimerSeq FusionScan TCGA_RNA-Seq SLMAP-FAF1 SLMAP chr3 57894877 + FAF1 chr1 51267349 - Exonic hg19 ESCA TCGA-L5-A4OF 7 Out-of-Frame Inter-chr p14.3 p32.3 Seq+ 4502 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175394270 - Exonic hg19 ESCA TCGA-L5-A4OF 5 5'UTR-CDS Inter-chr q21.1 q35.2 4503 ChimerSeq FusionScan TCGA_RNA-Seq PDZD8-BCAS1 PDZD8 chr10 119078382 - BCAS1 chr20 52602038 - Exonic hg19 ESCA TCGA-L5-A4OF 2 In-Frame Inter-chr q26.11 q13.2 4504 ChimerSeq FusionScan TCGA_RNA-Seq C21orf15-FAM95B1 C21orf15 chr21 15219079 - FAM95B1 chr9 42473935 + Exonic hg19 ESCA TCGA-L5-A4OF 2 3'UTR-5'UTR Inter-chr p11.2 4505 ChimerSeq FusionScan TCGA_RNA-Seq KRT13-TIMM22 KRT13 chr17 39658938 - TIMM22 chr17 902751 + Exonic hg19 ESCA TCGA-L5-A4OF 2 In-Frame Intra-chr q21.2 4506 ChimerSeq FusionScan TCGA_RNA-Seq BCAS3-POLD4 BCAS3 chr17 59161925 + POLD4 chr11 67120548 - Exonic hg19 ESCA TCGA-L5-A4OF 2 In-Frame Inter-chr q23.2 q13.2 Seq+ 4507 ChimerSeq FusionScan TCGA_RNA-Seq DMWD-SYMPK DMWD chr19 46294162 - SYMPK chr19 46324743 - Exonic hg19 ESCA TCGA-L5-A4OF 2 Out-of-Frame Intra-chr q13.32 q13.32 4508 ChimerSeq FusionScan TCGA_RNA-Seq PPP1CB-SALL4 PPP1CB chr2 29006844 + SALL4 chr20 50408891 - Exonic hg19 ESCA TCGA-L5-A4OF 2 In-Frame Inter-chr p23.2 q13.2 Tumor suppressor gene Transcription factor 4509 ChimerSeq FusionScan TCGA_RNA-Seq PLXNA2-CNOT1 PLXNA2 chr1 208383624 - CNOT1 chr16 58633415 - Exonic hg19 ESCA TCGA-L5-A4OF 2 CDS-5'UTR Inter-chr q32.2 q21 4510 ChimerSeq FusionScan TCGA_RNA-Seq MITF-CEP57 MITF chr3 69928534 + CEP57 chr11 95532395 + Exonic hg19 ESCA TCGA-L5-A4OF 2 In-Frame Inter-chr p13 Oncogene Transcription factor q21 4511 ChimerSeq FusionScan TCGA_RNA-Seq TRPV1-KRT13 TRPV1 chr17 3474817 - KRT13 chr17 39659064 - Exonic hg19 ESCA TCGA-L5-A4OF 2 Out-of-Frame Intra-chr p13.2 q21.2 4512 ChimerSeq FusionScan TCGA_RNA-Seq SMPDL3A-RNF146 SMPDL3A chr6 123110603 + RNF146 chr6 127601375 + Exonic hg19 ESCA TCGA-L5-A4OF 2 CDS-5'UTR Intra-chr q22.31 q22.33 4513 ChimerSeq FusionScan TCGA_RNA-Seq SPECC1L-EP400 SPECC1L chr22 24709434 + EP400 chr12 132445129 + Exonic hg19 ESCA TCGA-L5-A4OF 2 CDS-5'UTR Inter-chr q11.23 q24.33 Oncogene 4514 ChimerSeq FusionScan TCGA_RNA-Seq ME1-UBE3D ME1 chr6 84108085 - UBE3D chr6 83667169 - Exonic hg19 ESCA TCGA-VR-A8EO 5 In-Frame Intra-chr q14.2 q14.1 Seq+ 4515 ChimerSeq FusionScan TCGA_RNA-Seq UQCRH-KIAA0494 UQCRH chr1 46775988 + KIAA0494 chr1 47157609 - Exonic hg19 ESCA TCGA-VR-A8EO 2 In-Frame Intra-chr p33 4516 ChimerSeq FusionScan TCGA_RNA-Seq ZNF160-EXOSC5 ZNF160 chr19 53577392 - EXOSC5 chr19 41893508 - Exonic hg19 ESCA TCGA-VR-A8EO 2 Out-of-Frame Intra-chr q13.42 Transcription factor q13.2 4517 ChimerSeq FusionScan TCGA_RNA-Seq IGF2R-GJC1 IGF2R chr6 160510285 + GJC1 chr17 42884837 - Exonic hg19 ESCA TCGA-VR-A8EO 2 CDS-5'UTR Inter-chr q25.3 Oncogene Tumor suppressor gene q21.31 4518 ChimerSeq FusionScan TCGA_RNA-Seq MRPL35-AKT2 MRPL35 chr2 86437736 + AKT2 chr19 40761176 - Exonic hg19 ESCA TCGA-VR-A8EO 2 Out-of-Frame Inter-chr p11.2 q13.2 AGC:Akt Oncogene 4519 ChimerSeq FusionScan TCGA_RNA-Seq UCHL5-SLC6A17 UCHL5 chr1 193018875 - SLC6A17 chr1 110734593 + Exonic hg19 ESCA TCGA-VR-A8EO 2 In-Frame Intra-chr q31.2 p13.3 4520 ChimerSeq FusionScan TCGA_RNA-Seq ZNF512-H2AFV ZNF512 chr2 27840438 + H2AFV chr7 44874161 - Exonic hg19 ESCA TCGA-VR-A8EO 2 In-Frame Inter-chr p23.3 Transcription factor p13 4521 ChimerSeq FusionScan TCGA_RNA-Seq SLC3A2-PUM1 SLC3A2 chr11 62649538 + PUM1 chr1 31414970 - Exonic hg19 ESCA TCGA-VR-A8EO 2 Out-of-Frame Inter-chr q12.3 p35.2 4522 ChimerSeq FusionScan TCGA_RNA-Seq LEF1-RPL34 LEF1 chr4 109010280 - RPL34 chr4 109543106 + Exonic hg19 ESCA TCGA-VR-A8EO 2 CDS-5'UTR Intra-chr q25 Transcription factor q25 4523 ChimerSeq FusionScan TCGA_RNA-Seq PPP3R1-C1D PPP3R1 chr2 68479256 - C1D chr2 68274451 - Exonic hg19 ESCA TCGA-2H-A9GO 4 CDS-5'UTR Intra-chr p14 p14 Seq+ 4524 ChimerSeq FusionScan TCGA_RNA-Seq FOXJ3-VSTM4 FOXJ3 chr1 42776720 - VSTM4 chr10 50272781 - Exonic hg19 ESCA TCGA-2H-A9GO 2 Out-of-Frame Inter-chr p34.2 Transcription factor q11.23 4525 ChimerSeq FusionScan TCGA_RNA-Seq ZKSCAN1-SLC22A18 ZKSCAN1 chr7 99627998 + SLC22A18 chr11 2924443 + Exonic hg19 ESCA TCGA-2H-A9GO 2 CDS-5'UTR Inter-chr q22.1 Transcription factor p15.4 4526 ChimerSeq FusionScan TCGA_RNA-Seq SLC25A15-C11orf82 SLC25A15 chr13 41373451 + C11orf82 chr11 82625764 + Exonic hg19 ESCA TCGA-2H-A9GO 2 CDS-5'UTR Inter-chr q14.11 4527 ChimerSeq FusionScan TCGA_RNA-Seq GOLGB1-C1orf21 GOLGB1 chr3 121468478 - C1orf21 chr1 184446519 + Exonic hg19 ESCA TCGA-2H-A9GO 2 5'UTR-5'UTR Inter-chr q13.33 q25.3 4528 ChimerSeq FusionScan TCGA_RNA-Seq ZNF429-RBMS3 ZNF429 chr19 21688576 + RBMS3 chr3 29476233 + Exonic hg19 ESCA TCGA-2H-A9GO 2 In-Frame Inter-chr p12 Transcription factor p24.1 Tumor suppressor gene 4529 ChimerSeq FusionScan TCGA_RNA-Seq HSPA8-UBC HSPA8 chr11 122932771 - UBC chr12 125398320 - Exonic hg19 ESCA TCGA-2H-A9GO 2 5'UTR-5'UTR Inter-chr q24.1 q24.31 4530 ChimerSeq FusionScan TCGA_RNA-Seq PARD3-SRSF11 PARD3 chr10 34558584 - SRSF11 chr1 70687297 + Exonic hg19 ESCA TCGA-2H-A9GO 2 CDS-5'UTR Inter-chr p11.21 p31.1 4531 ChimerSeq FusionScan TCGA_RNA-Seq FAM102A-WDR93 FAM102A chr9 130715853 - WDR93 chr15 90286522 + Exonic hg19 ESCA TCGA-L5-A4OQ 21 Out-of-Frame Inter-chr q34.11 q26.1 Seq+ 4532 ChimerSeq FusionScan TCGA_RNA-Seq OLA1-CIR1 OLA1 chr2 175087760 - CIR1 chr2 175216453 - Exonic hg19 ESCA TCGA-L5-A4OQ 16 In-Frame Intra-chr q31.1 q31.1 Seq+ 4533 ChimerSeq FusionScan TCGA_RNA-Seq ACACA-LASP1 ACACA chr17 35536200 - LASP1 chr17 37034338 + Exonic hg19 ESCA TCGA-L5-A4OQ 15 In-Frame Intra-chr q12 Seq+ 4534 ChimerSeq FusionScan TCGA_RNA-Seq CTNNA1-EGR1 CTNNA1 chr5 138163407 + EGR1 chr5 137802445 + Exonic hg19 ESCA TCGA-L5-A4OQ 15 Out-of-Frame Intra-chr q31.2 Oncogene q31.2 Tumor suppressor gene Transcription factor Seq+ 4535 ChimerSeq FusionScan TCGA_RNA-Seq C7orf50-MAD1L1 C7orf50 chr7 1166892 - MAD1L1 chr7 1855864 - Exonic hg19 ESCA TCGA-L5-A4OQ 13 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 4536 ChimerSeq FusionScan TCGA_RNA-Seq TRPC4AP-RBM39 TRPC4AP chr20 33657098 - RBM39 chr20 34304727 - Exonic hg19 ESCA TCGA-L5-A4OQ 13 In-Frame Intra-chr q11.22 q11.22 Seq+ 4537 ChimerSeq FusionScan TCGA_RNA-Seq PIEZO1-CBFA2T3 PIEZO1 chr16 88815791 - CBFA2T3 chr16 88968064 - Exonic hg19 ESCA TCGA-L5-A4OQ 13 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene Seq+ 4538 ChimerSeq FusionScan TCGA_RNA-Seq TATDN2-FANCD2 TATDN2 chr3 10291298 + FANCD2 chr3 10142871 + Exonic hg19 ESCA TCGA-L5-A4OQ 9 In-Frame Intra-chr p25.3 p25.3 Oncogene Seq+ 4539 ChimerSeq FusionScan TCGA_RNA-Seq UBA2-MIER2 UBA2 chr19 34941269 + MIER2 chr19 334542 - Exonic hg19 ESCA TCGA-L5-A4OQ 7 In-Frame Intra-chr q13.11 p13.3 Seq+ 4540 ChimerSeq FusionScan TCGA_RNA-Seq MACROD1-BAD MACROD1 chr11 63918710 - BAD chr11 64051848 - Exonic hg19 ESCA TCGA-L5-A4OQ 7 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 4541 ChimerSeq FusionScan TCGA_RNA-Seq FAM222B-PHF12 FAM222B chr17 27169699 - PHF12 chr17 27237387 - Exonic hg19 ESCA TCGA-L5-A4OQ 6 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 4542 ChimerSeq FusionScan TCGA_RNA-Seq NCOA6-TRPC4AP NCOA6 chr20 33413274 - TRPC4AP chr20 33637797 - Exonic hg19 ESCA TCGA-L5-A4OQ 6 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 4543 ChimerSeq FusionScan TCGA_RNA-Seq TLK1-KCNH7 TLK1 chr2 171974248 - KCNH7 chr2 163393590 - Exonic hg19 ESCA TCGA-L5-A4OQ 6 Out-of-Frame Intra-chr q31.1 Other:TLK q24.2 Seq+ 4544 ChimerSeq FusionScan TCGA_RNA-Seq SNX27-PIP5K1A SNX27 chr1 151655921 + PIP5K1A chr1 151212430 + Exonic hg19 ESCA TCGA-L5-A4OQ 6 In-Frame Intra-chr q21.3 q21.3 Seq+ 4545 ChimerSeq FusionScan TCGA_RNA-Seq NUP188-PHYHD1 NUP188 chr9 131711522 + PHYHD1 chr9 131703723 + Exonic hg19 ESCA TCGA-L5-A4OQ 5 In-Frame Intra-chr q34.11 q34.11 Seq+ 4546 ChimerSeq FusionScan TCGA_RNA-Seq MPRIP-CCDC144A MPRIP chr17 16946285 + CCDC144A chr17 16664738 + Exonic hg19 ESCA TCGA-L5-A4OQ 5 In-Frame Intra-chr p11.2 p11.2 4547 ChimerSeq FusionScan TCGA_RNA-Seq SMURF1-PTCD1 SMURF1 chr7 98741348 - PTCD1 chr7 99027429 - Exonic hg19 ESCA TCGA-L5-A4OQ 5 Out-of-Frame Intra-chr q22.1 Seq+ 4548 ChimerSeq FusionScan TCGA_RNA-Seq TTLL5-JDP2 TTLL5 chr14 76259443 + JDP2 chr14 75928128 + Exonic hg19 ESCA TCGA-L5-A4OQ 5 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene Transcription factor Seq+ 4549 ChimerSeq FusionScan TCGA_RNA-Seq FAM222B-PHF12 FAM222B chr17 27161310 - PHF12 chr17 27237387 - Exonic hg19 ESCA TCGA-L5-A4OQ 4 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 4550 ChimerSeq FusionScan TCGA_RNA-Seq USP32-RBFOX3 USP32 chr17 58422841 - RBFOX3 chr17 77303906 - Exonic hg19 ESCA TCGA-L5-A4OQ 4 CDS-5'UTR Intra-chr q23.2 q25.3 Seq+ 4551 ChimerSeq FusionScan TCGA_RNA-Seq NUP188-PHYHD1 NUP188 chr9 131711522 + PHYHD1 chr9 131702877 + Exonic hg19 ESCA TCGA-L5-A4OQ 4 In-Frame Intra-chr q34.11 q34.11 Seq+ 4552 ChimerSeq FusionScan TCGA_RNA-Seq NUP214-ABL1 NUP214 chr9 134027281 + ABL1 chr9 133747515 + Exonic hg19 ESCA TCGA-L5-A4OQ 4 In-Frame Intra-chr q34.13 Oncogene q34.12 TK:Abl Oncogene KB Pub Seq+ 4553 ChimerSeq FusionScan TCGA_RNA-Seq CBFB-NAE1 CBFB chr16 67070658 + NAE1 chr16 66857503 - Exonic hg19 ESCA TCGA-L5-A4OQ 3 In-Frame Intra-chr q22.1 q22.1 Seq+ 4554 ChimerSeq FusionScan TCGA_RNA-Seq SAT1-APOO SAT1 chrX 23802000 + APOO chrX 23899069 - Exonic hg19 ESCA TCGA-L5-A4OQ 3 Out-of-Frame Intra-chr p22.11 p22.11 4555 ChimerSeq FusionScan TCGA_RNA-Seq PTPN4-PCDP1 PTPN4 chr2 120658382 + PCDP1 chr2 120306660 + Exonic hg19 ESCA TCGA-L5-A4OQ 3 CDS-5'UTR Intra-chr q14.2 Seq+ 4556 ChimerSeq FusionScan TCGA_RNA-Seq RAD54L-MAST2 RAD54L chr1 46715791 + MAST2 chr1 46498267 + Exonic hg19 ESCA TCGA-L5-A4OQ 3 In-Frame Intra-chr p34.1 p34.1 AGC:MAST Seq+ 4557 ChimerSeq FusionScan TCGA_RNA-Seq EPHB2-ZBTB40 EPHB2 chr1 23111569 + ZBTB40 chr1 22843792 + Exonic hg19 ESCA TCGA-L5-A4OQ 3 In-Frame Intra-chr p36.12 Tumor suppressor gene p36.12 Transcription factor Seq+ 4558 ChimerSeq FusionScan TCGA_RNA-Seq SMC3-MXI1 SMC3 chr10 112350330 + MXI1 chr10 112038937 + Exonic hg19 ESCA TCGA-L5-A4OQ 3 In-Frame Intra-chr q25.2 q25.2 Tumor suppressor gene Transcription factor Seq+ 4559 ChimerSeq FusionScan TCGA_RNA-Seq EEA1-UBE2N EEA1 chr12 93322818 - UBE2N chr12 93805075 - Exonic hg19 ESCA TCGA-L5-A4OQ 3 In-Frame Intra-chr q22 Transcription factor q22 Seq+ 4560 ChimerSeq FusionScan TCGA_RNA-Seq PXN-SRSF9 PXN chr12 120660351 - SRSF9 chr12 120903590 - Exonic hg19 ESCA TCGA-L5-A4OQ 3 In-Frame Intra-chr q24.23 q24.31 4561 ChimerSeq FusionScan TCGA_RNA-Seq SNX27-PIP5K1A SNX27 chr1 151584988 + PIP5K1A chr1 151206672 + Exonic hg19 ESCA TCGA-L5-A4OQ 2 Out-of-Frame Intra-chr q21.3 q21.3 Seq+ 4562 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 ESCA TCGA-L5-A4OQ 2 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 4563 ChimerSeq FusionScan TCGA_RNA-Seq API5-LCMT1 API5 chr11 43357544 + LCMT1 chr16 25172422 + Exonic hg19 ESCA TCGA-L5-A4OQ 2 In-Frame Inter-chr p12 p12.1 4564 ChimerSeq FusionScan TCGA_RNA-Seq VPS33A-ABCB9 VPS33A chr12 122734417 - ABCB9 chr12 123435112 - Exonic hg19 ESCA TCGA-L5-A4OQ 2 In-Frame Intra-chr q24.31 q24.31 Seq+ 4565 ChimerSeq FusionScan TCGA_RNA-Seq ATG10-CERS6 ATG10 chr5 81354421 + CERS6 chr2 169622101 + Exonic hg19 ESCA TCGA-L5-A4OQ 2 Out-of-Frame Inter-chr q14.1 q24.3 4566 ChimerSeq FusionScan TCGA_RNA-Seq UBQLN1-DNAJC8 UBQLN1 chr9 86292641 - DNAJC8 chr1 28541507 - Exonic hg19 ESCA TCGA-L5-A4OQ 2 Out-of-Frame Inter-chr q21.32 p35.3 4567 ChimerSeq FusionScan TCGA_RNA-Seq MYH14-GPR19 MYH14 chr19 50714027 + GPR19 chr12 12848445 - Exonic hg19 ESCA TCGA-L5-A4OQ 2 CDS-5'UTR Inter-chr q13.33 p13.1 Seq+ 4568 ChimerSeq FusionScan TCGA_RNA-Seq SNX30-KIAA1958 SNX30 chr9 115513437 + KIAA1958 chr9 115407929 + Exonic hg19 ESCA TCGA-L5-A4OQ 2 Out-of-Frame Intra-chr q32 q32 Seq+ 4569 ChimerSeq FusionScan TCGA_RNA-Seq COL27A1-ZNF618 COL27A1 chr9 117054490 + ZNF618 chr9 116731396 + Exonic hg19 ESCA TCGA-L5-A4OQ 2 In-Frame Intra-chr q32 q32 Transcription factor Seq+ 4570 ChimerSeq FusionScan TCGA_RNA-Seq TMSB10-CTNNB1 TMSB10 chr2 85132842 + CTNNB1 chr3 41265511 + Exonic hg19 ESCA TCGA-L5-A4OQ 2 5'UTR-5'UTR Inter-chr p11.2 p22.1 Oncogene 4571 ChimerSeq FusionScan TCGA_RNA-Seq CCDC84-RPS25 CCDC84 chr11 118886455 + RPS25 chr11 118886468 - Exonic hg19 ESCA TCGA-L5-A4OQ 2 3'UTR-3'UTR Intra-chr 4572 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB17-ARHGEF19 ZBTB17 chr1 16273429 - ARHGEF19 chr1 16531920 - Exonic hg19 ESCA TCGA-L5-A4OQ 2 In-Frame Intra-chr p36.13 Transcription factor p36.13 4573 ChimerSeq FusionScan TCGA_RNA-Seq ADNP-NFATC2 ADNP chr20 49545187 - NFATC2 chr20 50007988 - Exonic hg19 ESCA TCGA-L5-A4OQ 2 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.2 Tumor suppressor gene Transcription factor Seq+ 4574 ChimerSeq FusionScan TCGA_RNA-Seq CBL-PHLDB1 CBL chr11 119077322 + PHLDB1 chr11 118484530 + Exonic hg19 ESCA TCGA-L5-A4OQ 2 CDS-5'UTR Intra-chr q23.3 Oncogene Tumor suppressor gene q23.3 Seq+ 4575 ChimerSeq FusionScan TCGA_RNA-Seq CYP4F11-FAM95B1 CYP4F11 chr19 16038021 - FAM95B1 chr9 42470479 + Exonic hg19 ESCA TCGA-LN-A5U7 4 CDS-5'UTR Inter-chr p13.12 p11.2 4576 ChimerSeq FusionScan TCGA_RNA-Seq STAG1-NCK1 STAG1 chr3 136471036 - NCK1 chr3 136646825 + Exonic hg19 ESCA TCGA-LN-A5U7 2 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 4577 ChimerSeq FusionScan TCGA_RNA-Seq NRIP1-USP25 NRIP1 chr21 16386664 - USP25 chr21 17177439 + Exonic hg19 ESCA TCGA-LN-A5U7 2 5'UTR-CDS Intra-chr q21.1 q21.1 Seq+ 4578 ChimerSeq FusionScan TCGA_RNA-Seq RG9MTD1-CAMK4 RG9MTD1 chr3 101280847 + CAMK4 chr5 110679721 + Exonic hg19 ESCA TCGA-LN-A5U7 2 5'UTR-CDS Inter-chr q22.1 Seq+ 4579 ChimerSeq FusionScan TCGA_RNA-Seq PAPL-ACTN4 PAPL chr19 39576030 + ACTN4 chr19 39195573 + Exonic hg19 ESCA TCGA-L5-A8NI 26 In-Frame Intra-chr Seq+ 4580 ChimerSeq FusionScan TCGA_RNA-Seq MSH2-EPCAM MSH2 chr2 47630541 + EPCAM chr2 47612304 + Exonic hg19 ESCA TCGA-L5-A8NI 23 Out-of-Frame Intra-chr p21 Oncogene Tumor suppressor gene p21 Seq+ 4581 ChimerSeq FusionScan TCGA_RNA-Seq IST1-DHX38 IST1 chr16 71929492 + DHX38 chr16 72130037 + Exonic hg19 ESCA TCGA-L5-A8NI 15 5'UTR-5'UTR Intra-chr q22.2 q22.2 Seq+ 4582 ChimerSeq FusionScan TCGA_RNA-Seq CUX1-EMID2 CUX1 chr7 101559505 + EMID2 chr7 101176362 + Exonic hg19 ESCA TCGA-L5-A8NI 11 Out-of-Frame Intra-chr q22.1 Tumor suppressor gene Transcription factor Seq+ 4583 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD11-FANCA ANKRD11 chr16 89556652 - FANCA chr16 89818630 - Exonic hg19 ESCA TCGA-L5-A8NI 10 5'UTR-CDS Intra-chr q24.3 q24.3 Oncogene Seq+ 4584 ChimerSeq FusionScan TCGA_RNA-Seq KDM5A-NINJ2 KDM5A chr12 430160 - NINJ2 chr12 675344 - Exonic hg19 ESCA TCGA-L5-A8NI 9 In-Frame Intra-chr p13.33 Tumor suppressor gene p13.33 Seq+ 4585 ChimerSeq FusionScan TCGA_RNA-Seq FAM102A-C11orf30 FAM102A chr9 130742270 - C11orf30 chr11 76255302 + Exonic hg19 ESCA TCGA-L5-A8NI 9 Out-of-Frame Inter-chr q34.11 Seq+ 4586 ChimerSeq FusionScan TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104681470 + LHFPL3 chr7 104546633 + Exonic hg19 ESCA TCGA-L5-A8NI 8 Out-of-Frame Intra-chr q22.2 Seq+ 4587 ChimerSeq FusionScan TCGA_RNA-Seq RBM39-CPNE1 RBM39 chr20 34319862 - CPNE1 chr20 34220845 - Exonic hg19 ESCA TCGA-L5-A8NI 8 Out-of-Frame Intra-chr q11.22 q11.22 4588 ChimerSeq FusionScan TCGA_RNA-Seq NIPBL-C5orf42 NIPBL chr5 36962376 + C5orf42 chr5 37115151 - Exonic hg19 ESCA TCGA-L5-A8NI 7 In-Frame Intra-chr p13.2 p13.2 Seq+ 4589 ChimerSeq FusionScan TCGA_RNA-Seq WNK2-SUSD3 WNK2 chr9 96031028 + SUSD3 chr9 95838065 + Exonic hg19 ESCA TCGA-L5-A8NI 7 In-Frame Intra-chr q22.31 Tumor suppressor gene q22.31 Seq+ 4590 ChimerSeq FusionScan TCGA_RNA-Seq ZNF292-SLC35A1 ZNF292 chr6 87865477 + SLC35A1 chr6 88210225 + Exonic hg19 ESCA TCGA-L5-A8NI 6 Out-of-Frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q15 Seq+ 4591 ChimerSeq FusionScan TCGA_RNA-Seq UNK-KIAA0195 UNK chr17 73781065 + KIAA0195 chr17 73467880 + Exonic hg19 ESCA TCGA-L5-A8NI 6 5'UTR-5'UTR Intra-chr q25.1 Seq+ 4592 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD11-FANCA ANKRD11 chr16 89556652 - FANCA chr16 89825113 - Exonic hg19 ESCA TCGA-L5-A8NI 6 5'UTR-CDS Intra-chr q24.3 q24.3 Oncogene Seq+ 4593 ChimerSeq FusionScan TCGA_RNA-Seq RELB-ZNF227 RELB chr19 45532250 + ZNF227 chr19 44738854 + Exonic hg19 ESCA TCGA-L5-A8NI 6 Out-of-Frame Intra-chr q13.32 Transcription factor q13.31 Transcription factor Seq+ 4594 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R2A-MATR3 PPP2R2A chr8 26151256 + MATR3 chr5 138650363 + Exonic hg19 ESCA TCGA-L5-A8NI 5 Out-of-Frame Inter-chr p21.2 q31.2 Seq+ 4595 ChimerSeq FusionScan TCGA_RNA-Seq SUV420H1-RNPS1 SUV420H1 chr11 67980604 - RNPS1 chr16 2305727 - Exonic hg19 ESCA TCGA-L5-A8NI 5 5'UTR-CDS Inter-chr p13.3 Seq+ 4596 ChimerSeq FusionScan TCGA_RNA-Seq ETHE1-PLAUR ETHE1 chr19 44030666 - PLAUR chr19 44159725 - Exonic hg19 ESCA TCGA-L5-A8NI 5 In-Frame Intra-chr q13.31 q13.31 Seq+ 4597 ChimerSeq FusionScan TCGA_RNA-Seq DGKD-SAG DGKD chr2 234299129 + SAG chr2 234243607 + Exonic hg19 ESCA TCGA-L5-A8NI 4 Out-of-Frame Intra-chr Seq+ 4598 ChimerSeq FusionScan TCGA_RNA-Seq RBM47-APBB2 RBM47 chr4 40631412 - APBB2 chr4 40832594 - Exonic hg19 ESCA TCGA-L5-A8NI 4 5'UTR-5'UTR Intra-chr p14 p13 Seq+ 4599 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D14-MRFAP1 TBC1D14 chr4 6925838 + MRFAP1 chr4 6643456 + Exonic hg19 ESCA TCGA-L5-A8NI 3 CDS-3'UTR Intra-chr p16.1 p16.1 Seq+ 4600 ChimerSeq FusionScan TCGA_RNA-Seq USF2-ZNF30 USF2 chr19 35760906 + ZNF30 chr19 35433497 + Exonic hg19 ESCA TCGA-L5-A8NI 3 CDS-5'UTR Intra-chr q13.12 Transcription factor q13.11 Transcription factor Seq+ 4601 ChimerSeq FusionScan TCGA_RNA-Seq TRIM14-CORO2A TRIM14 chr9 100881263 - CORO2A chr9 100899970 - Exonic hg19 ESCA TCGA-L5-A8NI 3 In-Frame Intra-chr q22.33 q22.33 Seq+ 4602 ChimerSeq FusionScan TCGA_RNA-Seq ERC1-WNK1 ERC1 chr12 1213990 + WNK1 chr12 987377 + Exonic hg19 ESCA TCGA-L5-A8NI 3 In-Frame Intra-chr p13.33 Seq+ 4603 ChimerSeq FusionScan TCGA_RNA-Seq GOLPH3-IKZF3 GOLPH3 chr5 32173915 - IKZF3 chr17 37934020 - Exonic hg19 ESCA TCGA-L5-A8NI 3 Out-of-Frame Inter-chr p13.3 q21.1 Tumor suppressor gene Transcription factor Seq+ 4604 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1671-CNIH3 KIAA1671 chr22 25445331 + CNIH3 chr1 224868659 + Exonic hg19 ESCA TCGA-L5-A8NI 3 In-Frame Inter-chr q11.23 q42.12 Seq+ 4605 ChimerSeq FusionScan TCGA_RNA-Seq PLA2G6-TPTE2 PLA2G6 chr22 38541444 - TPTE2 chr13 20067641 - Exonic hg19 ESCA TCGA-L5-A8NI 3 In-Frame Inter-chr q13.1 q12.11 Tumor suppressor gene 4606 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-SND1 MLL3 chr7 152132710 - SND1 chr7 127447537 + Exonic hg19 ESCA TCGA-L5-A8NI 2 Out-of-Frame Intra-chr Tumor suppressor gene q32.1 Seq+ 4607 ChimerSeq FusionScan TCGA_RNA-Seq TRAPPC10-AGPAT3 TRAPPC10 chr21 45432441 + AGPAT3 chr21 45402184 + Exonic hg19 ESCA TCGA-L5-A8NI 2 In-Frame Intra-chr q22.3 q22.3 Seq+ 4608 ChimerSeq FusionScan TCGA_RNA-Seq CCDC169-FAM176C CCDC169 chr13 36857605 - FAM176C chr21 33873724 + Exonic hg19 ESCA TCGA-L5-A8NI 2 Out-of-Frame Inter-chr q13.3 4609 ChimerSeq FusionScan TCGA_RNA-Seq NISCH-DNAH1 NISCH chr3 52492860 + DNAH1 chr3 52413920 + Exonic hg19 ESCA TCGA-L5-A8NI 2 In-Frame Intra-chr p21.1 p21.1 Seq+ 4610 ChimerSeq FusionScan TCGA_RNA-Seq SND1-MLL3 SND1 chr7 127292505 + MLL3 chr7 152055760 - Exonic hg19 ESCA TCGA-L5-A8NI 2 Out-of-Frame Intra-chr q32.1 Tumor suppressor gene 4611 ChimerSeq FusionScan TCGA_RNA-Seq NISCH-DNAH1 NISCH chr3 52492860 + DNAH1 chr3 52415655 + Exonic hg19 ESCA TCGA-L5-A8NI 2 In-Frame Intra-chr p21.1 p21.1 Seq+ 4612 ChimerSeq FusionScan TCGA_RNA-Seq USF2-ZNF30 USF2 chr19 35760602 + ZNF30 chr19 35434126 + Exonic hg19 ESCA TCGA-L5-A8NI 2 Out-of-Frame Intra-chr q13.12 Transcription factor q13.11 Transcription factor Seq+ 4613 ChimerSeq FusionScan TCGA_RNA-Seq DDB1-CPSF7 DDB1 chr11 61080970 - CPSF7 chr11 61183991 - Exonic hg19 ESCA TCGA-L5-A8NI 2 Out-of-Frame Intra-chr q12.2 q12.2 Seq+ 4614 ChimerSeq FusionScan TCGA_RNA-Seq MAP4-CDC25A MAP4 chr3 48130262 - CDC25A chr3 48215947 - Exonic hg19 ESCA TCGA-L5-A8NI 2 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 4615 ChimerSeq FusionScan TCGA_RNA-Seq RNF123-CROCC RNF123 chr3 49728680 + CROCC chr1 17263131 + Exonic hg19 ESCA TCGA-L5-A8NI 2 Out-of-Frame Inter-chr p21.31 p36.13 4616 ChimerSeq FusionScan TCGA_RNA-Seq ERO1L-TXNDC16 ERO1L chr14 53133092 - TXNDC16 chr14 52922180 - Exonic hg19 ESCA TCGA-L5-A8NI 2 In-Frame Intra-chr q22.1 Seq+ 4617 ChimerSeq FusionScan TCGA_RNA-Seq ZNF292-SLC35A1 ZNF292 chr6 87865477 + SLC35A1 chr6 88210875 + Exonic hg19 ESCA TCGA-L5-A8NI 2 In-Frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q15 Seq+ 4618 ChimerSeq FusionScan TCGA_RNA-Seq GOLPH3-IKZF3 GOLPH3 chr5 32173915 - IKZF3 chr17 37922746 - Exonic hg19 ESCA TCGA-L5-A8NI 2 Out-of-Frame Inter-chr p13.3 q21.1 Tumor suppressor gene Transcription factor Seq+ 4619 ChimerSeq FusionScan TCGA_RNA-Seq KDELR2-ZNF12 KDELR2 chr7 6523597 - ZNF12 chr7 6744854 - Exonic hg19 ESCA TCGA-L5-A8NI 2 CDS-5'UTR Intra-chr p22.1 p22.1 Transcription factor 4620 ChimerSeq FusionScan TCGA_RNA-Seq IKBKAP-PTPN3 IKBKAP chr9 111673289 - PTPN3 chr9 112153841 - Exonic hg19 ESCA TCGA-L5-A8NI 2 Out-of-Frame Intra-chr q31.3 q31.3 4621 ChimerSeq FusionScan TCGA_RNA-Seq THRAP3-ARHGEF10L THRAP3 chr1 36690106 + ARHGEF10L chr1 17907047 + Exonic hg19 ESCA TCGA-L5-A8NI 2 5'UTR-5'UTR Intra-chr p34.3 p36.13 Seq+ 4622 ChimerSeq FusionScan TCGA_RNA-Seq SPRED1-C15orf39 SPRED1 chr15 38591748 + C15orf39 chr15 75498339 + Exonic hg19 ESCA TCGA-L5-A8NI 2 CDS-5'UTR Intra-chr q14 q24.2 4623 ChimerSeq FusionScan TCGA_RNA-Seq SHROOM3-LUC7L SHROOM3 chr4 77476916 + LUC7L chr16 258187 - Exonic hg19 ESCA TCGA-L5-A8NI 2 Out-of-Frame Inter-chr q21.1 p13.3 Seq+ 4624 ChimerSeq FusionScan TCGA_RNA-Seq PGM2L1-CHRDL2 PGM2L1 chr11 74109095 - CHRDL2 chr11 74429877 - Exonic hg19 ESCA TCGA-L5-A8NI 2 Out-of-Frame Intra-chr q13.4 q13.4 Seq+ 4625 ChimerSeq FusionScan TCGA_RNA-Seq RPH3AL-NXN RPH3AL chr17 131558 - NXN chr17 729318 - Exonic hg19 ESCA TCGA-JY-A93C 3 In-Frame Intra-chr p13.3 4626 ChimerSeq FusionScan TCGA_RNA-Seq SSU72-ITGAL SSU72 chr1 1509857 - ITGAL chr16 30485516 + Exonic hg19 ESCA TCGA-JY-A93C 2 Out-of-Frame Inter-chr p36.33 p11.2 4627 ChimerSeq FusionScan TCGA_RNA-Seq PIP5K1B-FXN PIP5K1B chr9 71606173 + FXN chr9 71661300 + Exonic hg19 ESCA TCGA-JY-A93C 2 In-Frame Intra-chr q21.11 q21.11 Tumor suppressor gene Seq+ 4628 ChimerSeq FusionScan TCGA_RNA-Seq RPH3AL-NXN RPH3AL chr17 96901 - NXN chr17 729318 - Exonic hg19 ESCA TCGA-JY-A93C 2 Out-of-Frame Intra-chr p13.3 4629 ChimerSeq FusionScan TCGA_RNA-Seq FARP1-DOCK9 FARP1 chr13 98865667 + DOCK9 chr13 99556960 - Exonic hg19 ESCA TCGA-VR-A8EY 2 In-Frame Intra-chr q32.2 q32.3 4630 ChimerSeq FusionScan TCGA_RNA-Seq PGLYRP3-SPRR2G PGLYRP3 chr1 153283086 - SPRR2G chr1 153122607 - Exonic hg19 ESCA TCGA-VR-A8EY 2 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 4631 ChimerSeq FusionScan TCGA_RNA-Seq IST1-ATXN1L IST1 chr16 71929492 + ATXN1L chr16 71917019 + Exonic hg19 ESCA TCGA-IG-A97H 10 5'UTR-5'UTR Intra-chr q22.2 q22.2 4632 ChimerSeq FusionScan TCGA_RNA-Seq PPM1G-IFT172 PPM1G chr2 27632169 - IFT172 chr2 27682389 - Exonic hg19 ESCA TCGA-IG-A97H 3 Out-of-Frame Intra-chr p23.3 p23.3 Seq+ 4633 ChimerSeq FusionScan TCGA_RNA-Seq HEATR1-SIAH1 HEATR1 chr1 236739518 - SIAH1 chr16 48396341 - Exonic hg19 ESCA TCGA-IG-A97H 2 Out-of-Frame Inter-chr q43 q12.1 Tumor suppressor gene 4634 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-PLXNB2 CPSF6 chr12 69656342 + PLXNB2 chr22 50727571 - Exonic hg19 ESCA TCGA-IG-A97H 2 3'UTR-CDS Inter-chr q15 q13.33 4635 ChimerSeq FusionScan TCGA_RNA-Seq TYMS-SLC12A4 TYMS chr18 662320 + SLC12A4 chr16 67997462 - Exonic hg19 ESCA TCGA-IG-A97H 2 3'UTR-CDS Inter-chr p11.32 q22.1 4636 ChimerSeq FusionScan TCGA_RNA-Seq DANCR-BMP1 DANCR chr4 53579126 + BMP1 chr8 22054192 + Exonic hg19 ESCA TCGA-IG-A97H 2 5'UTR-5'UTR Inter-chr q12 p21.3 4637 ChimerSeq FusionScan TCGA_RNA-Seq USP34-XPO1 USP34 chr2 61597455 - XPO1 chr2 61761038 - Exonic hg19 ESCA TCGA-IG-A97H 2 CDS-5'UTR Intra-chr p15 p15 Oncogene Seq+ 4638 ChimerSeq FusionScan TCGA_RNA-Seq CHMP1A-FANCA CHMP1A chr16 89723989 - FANCA chr16 89851372 - Exonic hg19 ESCA TCGA-IG-A97H 2 Out-of-Frame Intra-chr q24.3 q24.3 Oncogene Seq+ 4639 ChimerSeq FusionScan TCGA_RNA-Seq ACLY-NEUROD2 ACLY chr17 40039374 - NEUROD2 chr17 37762857 - Exonic hg19 ESCA TCGA-VR-AA4D 23 CDS-5'UTR Intra-chr q21.2 q12 Transcription factor Seq+ 4640 ChimerSeq FusionScan TCGA_RNA-Seq ACAA2-MYO5B ACAA2 chr18 47339838 - MYO5B chr18 47380017 - Exonic hg19 ESCA TCGA-VR-AA4D 6 Out-of-Frame Intra-chr q21.1 q21.1 Seq+ 4641 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-SLMAP RPL22 chr1 6252989 - SLMAP chr3 57908615 + Exonic hg19 ESCA TCGA-VR-AA4D 2 Out-of-Frame Inter-chr p36.31 p14.3 4642 ChimerSeq FusionScan TCGA_RNA-Seq USP14-DDB2 USP14 chr18 166819 + DDB2 chr11 47259387 + Exonic hg19 ESCA TCGA-VR-AA4D 2 In-Frame Inter-chr p11.32 p11.2 Oncogene Tumor suppressor gene 4643 ChimerSeq FusionScan TCGA_RNA-Seq KHDRBS1-IPPK KHDRBS1 chr1 32496023 + IPPK chr9 95396770 - Exonic hg19 ESCA TCGA-VR-AA4D 2 Out-of-Frame Inter-chr p35.2 q22.31 4644 ChimerSeq FusionScan TCGA_RNA-Seq GLE1-C16orf88 GLE1 chr9 131267183 + C16orf88 chr16 19726359 - Exonic hg19 ESCA TCGA-VR-AA4D 2 CDS-5'UTR Inter-chr q34.11 4645 ChimerSeq FusionScan TCGA_RNA-Seq CDC42EP5-ATP2C1 CDC42EP5 chr19 54982765 - ATP2C1 chr3 130698092 + Exonic hg19 ESCA TCGA-V5-AASX 2 5'UTR-CDS Inter-chr q22.1 4646 ChimerSeq FusionScan TCGA_RNA-Seq PRKAA1-SIN3A PRKAA1 chr5 40777546 - SIN3A chr15 75685156 - Exonic hg19 ESCA TCGA-V5-AASX 2 Out-of-Frame Inter-chr p13.1 Tumor suppressor gene q24.2 4647 ChimerSeq FusionScan TCGA_RNA-Seq FOXN3-UBQLN1 FOXN3 chr14 90085371 - UBQLN1 chr9 86284242 - Exonic hg19 ESCA TCGA-V5-AASX 2 5'UTR-CDS Inter-chr q32.11 Transcription factor q21.32 4648 ChimerSeq FusionScan TCGA_RNA-Seq GNAI3-CYB561D1 GNAI3 chr1 110129504 + CYB561D1 chr1 110037764 + Exonic hg19 ESCA TCGA-2H-A9GN 14 In-Frame Intra-chr p13.3 p13.3 Seq+ 4649 ChimerSeq FusionScan TCGA_RNA-Seq SMARCA4-DNM2 SMARCA4 chr19 11071850 + DNM2 chr19 10916591 + Exonic hg19 ESCA TCGA-2H-A9GN 11 5'UTR-CDS Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 4650 ChimerSeq FusionScan TCGA_RNA-Seq LPCAT4-SPRED1 LPCAT4 chr15 34654396 - SPRED1 chr15 38591573 + Exonic hg19 ESCA TCGA-2H-A9GN 10 In-Frame Intra-chr q14 q14 Seq+ 4651 ChimerSeq FusionScan TCGA_RNA-Seq LRFN1-DLL3 LRFN1 chr19 39804570 - DLL3 chr19 39993454 + Exonic hg19 ESCA TCGA-2H-A9GN 8 Out-of-Frame Intra-chr q13.2 q13.2 Seq+ 4652 ChimerSeq FusionScan TCGA_RNA-Seq DGAT1-TONSL DGAT1 chr8 145544983 - TONSL chr8 145662482 - Exonic hg19 ESCA TCGA-2H-A9GN 6 In-Frame Intra-chr q24.3 q24.3 Seq+ 4653 ChimerSeq FusionScan TCGA_RNA-Seq LTA4H-CDK17 LTA4H chr12 96400091 - CDK17 chr12 96694138 - Exonic hg19 ESCA TCGA-2H-A9GN 4 In-Frame Intra-chr q23.1 q23.1 Seq+ 4654 ChimerSeq FusionScan TCGA_RNA-Seq DMPK-SLPI DMPK chr19 46278206 - SLPI chr20 43882374 - Exonic hg19 ESCA TCGA-2H-A9GN 4 Out-of-Frame Inter-chr q13.32 q13.12 Seq+ 4655 ChimerSeq FusionScan TCGA_RNA-Seq PANK4-TTC34 PANK4 chr1 2441300 - TTC34 chr1 2577002 - Exonic hg19 ESCA TCGA-2H-A9GN 3 Out-of-Frame Intra-chr p36.32 Seq+ 4656 ChimerSeq FusionScan TCGA_RNA-Seq TFDP2-XRN1 TFDP2 chr3 141868024 - XRN1 chr3 142145683 - Exonic hg19 ESCA TCGA-2H-A9GN 3 5'UTR-CDS Intra-chr q23 Transcription factor q23 Seq+ 4657 ChimerSeq FusionScan TCGA_RNA-Seq NDE1-C16orf45 NDE1 chr16 15790717 + C16orf45 chr16 15609161 + Exonic hg19 ESCA TCGA-2H-A9GN 3 Out-of-Frame Intra-chr p13.11 4658 ChimerSeq FusionScan TCGA_RNA-Seq GGCT-ZSCAN21 GGCT chr7 30544184 - ZSCAN21 chr7 99661410 + Exonic hg19 ESCA TCGA-2H-A9GN 2 Out-of-Frame Intra-chr p14.3 q22.1 Transcription factor 4659 ChimerSeq FusionScan TCGA_RNA-Seq NR1D1-DMKN NR1D1 chr17 38253317 - DMKN chr19 35990931 - Exonic hg19 ESCA TCGA-2H-A9GN 2 Out-of-Frame Inter-chr q21.1 Transcription factor q13.12 4660 ChimerSeq FusionScan TCGA_RNA-Seq GNAI3-CYB561D1 GNAI3 chr1 110129504 + CYB561D1 chr1 110037141 + Exonic hg19 ESCA TCGA-2H-A9GN 2 In-Frame Intra-chr p13.3 p13.3 Seq+ 4661 ChimerSeq FusionScan TCGA_RNA-Seq IFT80-SMC4 IFT80 chr3 160093599 - SMC4 chr3 160141212 + Exonic hg19 ESCA TCGA-2H-A9GN 2 Out-of-Frame Intra-chr q25.33 q25.33 4662 ChimerSeq FusionScan TCGA_RNA-Seq PPOX-CDK5RAP3 PPOX chr1 161137024 + CDK5RAP3 chr17 46048727 + Exonic hg19 ESCA TCGA-2H-A9GN 2 In-Frame Inter-chr q23.3 q21.32 4663 ChimerSeq FusionScan TCGA_RNA-Seq TRPC4AP-UQCC TRPC4AP chr20 33632307 - UQCC chr20 33894582 - Exonic hg19 ESCA TCGA-2H-A9GN 2 Out-of-Frame Intra-chr q11.22 4664 ChimerSeq FusionScan TCGA_RNA-Seq PRIM1-R3HDM2 PRIM1 chr12 57127930 - R3HDM2 chr12 57663777 - Exonic hg19 ESCA TCGA-2H-A9GN 2 Out-of-Frame Intra-chr q13.3 q13.3 4665 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-NEGR1 RCC1 chr1 28834672 + NEGR1 chr1 72400994 - Exonic hg19 ESCA TCGA-2H-A9GN 2 5'UTR-CDS Intra-chr p35.3 p31.1 4666 ChimerSeq FusionScan TCGA_RNA-Seq SERGEF-SPTY2D1 SERGEF chr11 18010143 - SPTY2D1 chr11 18638536 - Exonic hg19 ESCA TCGA-2H-A9GN 2 Out-of-Frame Intra-chr p15.1 p15.1 4667 ChimerSeq FusionScan TCGA_RNA-Seq STEAP3-ZNFX1 STEAP3 chr2 119981464 + ZNFX1 chr20 47892424 - Exonic hg19 ESCA TCGA-2H-A9GN 2 5'UTR-5'UTR Inter-chr q14.2 q13.13 4668 ChimerSeq FusionScan TCGA_RNA-Seq ATP7B-KLF5 ATP7B chr13 52585422 - KLF5 chr13 73635998 + Exonic hg19 ESCA TCGA-LN-A7HX 17 In-Frame Intra-chr q14.3 q22.1 Tumor suppressor gene Transcription factor Seq+ 4669 ChimerSeq FusionScan TCGA_RNA-Seq SRGAP2P2-RASSF5 SRGAP2P2 chr1 143916308 + RASSF5 chr1 206711500 + Exonic hg19 ESCA TCGA-LN-A7HX 9 5'UTR-CDS Intra-chr q32.1 Tumor suppressor gene 4670 ChimerSeq FusionScan TCGA_RNA-Seq ATP2C1-NEK11 ATP2C1 chr3 130688240 + NEK11 chr3 131068400 + Exonic hg19 ESCA TCGA-LN-A7HX 8 Out-of-Frame Intra-chr q22.1 q22.1 Other:NEK Seq+ 4671 ChimerSeq FusionScan TCGA_RNA-Seq ATP2C1-NEK11 ATP2C1 chr3 130686263 + NEK11 chr3 131068400 + Exonic hg19 ESCA TCGA-LN-A7HX 3 Out-of-Frame Intra-chr q22.1 q22.1 Other:NEK Seq+ 4672 ChimerSeq FusionScan TCGA_RNA-Seq DCUN1D2-TMCO3 DCUN1D2 chr13 114144981 - TMCO3 chr13 114164552 + Exonic hg19 ESCA TCGA-LN-A7HX 2 In-Frame Intra-chr q34 q34 Seq+ 4673 ChimerSeq FusionScan TCGA_RNA-Seq DCUN1D2-TFDP1 DCUN1D2 chr13 114144981 - TFDP1 chr13 114265310 + Exonic hg19 ESCA TCGA-LN-A7HX 2 In-Frame Intra-chr q34 q34 Transcription factor Seq+ 4674 ChimerSeq FusionScan TCGA_RNA-Seq TMX2-CTNND1 TMX2 chr11 57505140 + CTNND1 chr11 57558856 + Exonic hg19 ESCA TCGA-LN-A7HX 2 5'UTR-5'UTR Intra-chr q12.1 q12.1 Tumor suppressor gene 4675 ChimerSeq FusionScan TCGA_RNA-Seq PARP2-ABCD4 PARP2 chr14 20822406 + ABCD4 chr14 74755468 - Exonic hg19 ESCA TCGA-LN-A7HX 2 In-Frame Intra-chr q11.2 q24.3 4676 ChimerSeq FusionScan TCGA_RNA-Seq RALGAPB-KCNB1 RALGAPB chr20 37128276 + KCNB1 chr20 47991529 - Exonic hg19 ESCA TCGA-VR-A8EQ 16 Out-of-Frame Intra-chr q11.23 q13.13 Seq+ 4677 ChimerSeq FusionScan TCGA_RNA-Seq DSC2-TAF4B DSC2 chr18 28669401 - TAF4B chr18 23845133 + Exonic hg19 ESCA TCGA-VR-A8EQ 3 Out-of-Frame Intra-chr q12.1 Tumor suppressor gene q11.2 4678 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R12C-CNN2 PPP1R12C chr19 55610151 - CNN2 chr19 1036128 + Exonic hg19 ESCA TCGA-VR-A8EQ 2 In-Frame Intra-chr q13.42 p13.3 Seq+ 4679 ChimerSeq FusionScan TCGA_RNA-Seq FAM59A-GLRX3 FAM59A chr18 30050270 - GLRX3 chr10 131967696 + Exonic hg19 ESCA TCGA-VR-A8EQ 2 Out-of-Frame Inter-chr q26.3 4680 ChimerSeq FusionScan TCGA_RNA-Seq ZNF519-PPP4R1 ZNF519 chr18 14132273 - PPP4R1 chr18 9563548 - Exonic hg19 ESCA TCGA-VR-A8EQ 2 Out-of-Frame Intra-chr p11.21 Transcription factor p11.22 4681 ChimerSeq FusionScan TCGA_RNA-Seq GTF2IRD1-RPSA GTF2IRD1 chr7 73868506 + RPSA chr3 39450096 + Exonic hg19 ESCA TCGA-VR-A8EQ 2 5'UTR-CDS Inter-chr q11.23 Transcription factor p22.1 4682 ChimerSeq FusionScan TCGA_RNA-Seq AGAP1-COPS7B AGAP1 chr2 236659132 + COPS7B chr2 232672196 + Exonic hg19 ESCA TCGA-VR-A8EQ 2 Out-of-Frame Intra-chr q37.2 q37.1 4683 ChimerSeq FusionScan TCGA_RNA-Seq CSNK1D-TAF15 CSNK1D chr17 80210309 - TAF15 chr17 34151081 + Exonic hg19 ESCA TCGA-VR-A8EQ 2 In-Frame Intra-chr q25.3 q12 4684 ChimerSeq FusionScan TCGA_RNA-Seq CMPK1-SERINC2 CMPK1 chr1 47799788 + SERINC2 chr1 31905813 + Exonic hg19 ESCA TCGA-VR-A8EQ 2 Out-of-Frame Intra-chr p33 Oncogene p35.2 4685 ChimerSeq FusionScan TCGA_RNA-Seq ASAH1-ANKZF1 ASAH1 chr8 17921965 - ANKZF1 chr2 220099547 + Exonic hg19 ESCA TCGA-VR-A8EQ 2 In-Frame Inter-chr p22 q35 Transcription factor 4686 ChimerSeq FusionScan TCGA_RNA-Seq SARS-LPCAT4 SARS chr1 109778053 + LPCAT4 chr15 34657902 - Exonic hg19 ESCA TCGA-VR-A8EQ 2 In-Frame Inter-chr p13.3 q14 4687 ChimerSeq FusionScan TCGA_RNA-Seq TMEM241-TRAPPC8 TMEM241 chr18 20948678 - TRAPPC8 chr18 29477854 - Exonic hg19 ESCA TCGA-VR-A8EQ 2 In-Frame Intra-chr q11.2 q12.1 4688 ChimerSeq FusionScan TCGA_RNA-Seq BIRC6-TTC27 BIRC6 chr2 32695369 + TTC27 chr2 33002948 + Exonic hg19 ESCA TCGA-LN-A49U 3 Out-of-Frame Intra-chr p22.3 p22.3 Seq+ 4689 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-PION PTPN12 chr7 77221573 + PION chr7 77035422 - Exonic hg19 ESCA TCGA-LN-A49U 2 Out-of-Frame Intra-chr q11.23 Tumor suppressor gene Seq+ 4690 ChimerSeq FusionScan TCGA_RNA-Seq LIN52-AHSA1 LIN52 chr14 74551696 + AHSA1 chr14 77928502 + Exonic hg19 ESCA TCGA-IG-A6QS 13 In-Frame Intra-chr q24.3 q24.3 Seq+ 4691 ChimerSeq FusionScan TCGA_RNA-Seq TASP1-SEL1L2 TASP1 chr20 13604092 - SEL1L2 chr20 13830965 - Exonic hg19 ESCA TCGA-IG-A6QS 4 In-Frame Intra-chr p12.1 p12.1 Seq+ 4692 ChimerSeq FusionScan TCGA_RNA-Seq TP63-PINX1 TP63 chr3 189526315 + PINX1 chr8 10623426 - Exonic hg19 ESCA TCGA-IG-A6QS 3 In-Frame Inter-chr q28 Tumor suppressor gene Transcription factor p23.1 Tumor suppressor gene 4693 ChimerSeq FusionScan TCGA_RNA-Seq SAMHD1-MRPL52 SAMHD1 chr20 35559162 - MRPL52 chr14 23303380 + Exonic hg19 ESCA TCGA-IG-A6QS 2 In-Frame Inter-chr q11.23 q11.2 4694 ChimerSeq FusionScan TCGA_RNA-Seq DUOX1-COL17A1 DUOX1 chr15 45430212 + COL17A1 chr10 105799398 - Exonic hg19 ESCA TCGA-IG-A6QS 2 Out-of-Frame Inter-chr q21.1 q25.1 4695 ChimerSeq FusionScan TCGA_RNA-Seq CEP72-EXOC3 CEP72 chr5 648031 + EXOC3 chr5 453484 + Exonic hg19 ESCA TCGA-V5-AASW 9 Out-of-Frame Intra-chr p15.33 Seq+ 4696 ChimerSeq FusionScan TCGA_RNA-Seq GNAQ-FBP1 GNAQ chr9 80646015 - FBP1 chr9 97382773 - Exonic hg19 ESCA TCGA-V5-AASW 4 Out-of-Frame Intra-chr q21.2 Oncogene q22.32 Tumor suppressor gene Seq+ 4697 ChimerSeq FusionScan TCGA_RNA-Seq ABL1-APBA1 ABL1 chr9 133710912 + APBA1 chr9 72132195 - Exonic hg19 ESCA TCGA-V5-AASW 4 CDS-5'UTR Intra-chr q34.12 TK:Abl Oncogene q21.12 Seq+ 4698 ChimerSeq FusionScan TCGA_RNA-Seq AGTPBP1-GNAQ AGTPBP1 chr9 88292350 - GNAQ chr9 80336429 - Exonic hg19 ESCA TCGA-V5-AASW 2 In-Frame Intra-chr q21.33 q21.2 Oncogene Seq+ 4699 ChimerSeq FusionScan TCGA_RNA-Seq IGSF1-LRPPRC IGSF1 chrX 130420578 - LRPPRC chr2 44139697 - Exonic hg19 ESCA TCGA-V5-AASW 2 In-Frame Inter-chr q26.2 p21 4700 ChimerSeq FusionScan TCGA_RNA-Seq RAC1-ZNF586 RAC1 chr7 6431672 + ZNF586 chr19 58287910 + Exonic hg19 ESCA TCGA-V5-AASW 2 In-Frame Inter-chr p22.1 Oncogene q13.43 Transcription factor 4701 ChimerSeq FusionScan TCGA_RNA-Seq ZNF148-C21orf37 ZNF148 chr3 125042152 - C21orf37 chr21 18816400 + Exonic hg19 ESCA TCGA-V5-AASW 2 5'UTR-5'UTR Inter-chr q21.2 Transcription factor 4702 ChimerSeq FusionScan TCGA_RNA-Seq TRIM29-RHCG TRIM29 chr11 119998043 - RHCG chr15 90021205 - Exonic hg19 ESCA TCGA-L5-A8NW 2 In-Frame Inter-chr q23.3 q26.1 4703 ChimerSeq FusionScan TCGA_RNA-Seq DSG3-DSC3 DSG3 chr18 29027888 + DSC3 chr18 28588491 - Exonic hg19 ESCA TCGA-L5-A8NW 2 In-Frame Intra-chr q12.1 q12.1 Tumor suppressor gene 4704 ChimerSeq FusionScan TCGA_RNA-Seq PCM1-HMBOX1 PCM1 chr8 17851128 + HMBOX1 chr8 28866588 + Exonic hg19 ESCA TCGA-L5-A8NW 2 Out-of-Frame Intra-chr p22 p21.1 Transcription factor 4705 ChimerSeq FusionScan TCGA_RNA-Seq SRD5A1-GRK4 SRD5A1 chr5 6663079 + GRK4 chr4 3024140 + Exonic hg19 ESCA TCGA-L5-A8NW 2 3'UTR-CDS Inter-chr p15.31 p16.3 4706 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 ESCA TCGA-L5-A8NW 2 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 4707 ChimerSeq FusionScan TCGA_RNA-Seq RGS12-SH3KBP1 RGS12 chr4 3372048 + SH3KBP1 chrX 19725102 - Exonic hg19 ESCA TCGA-L5-A8NW 2 Out-of-Frame Inter-chr p16.3 p22.12 4708 ChimerSeq FusionScan TCGA_RNA-Seq FAM118A-CYB5R3 FAM118A chr22 45719308 + CYB5R3 chr22 43032852 - Exonic hg19 ESCA TCGA-JY-A93D 2 In-Frame Intra-chr q13.31 q13.2 4709 ChimerSeq FusionScan TCGA_RNA-Seq ZFY-HNRNPC ZFY chrY 2803487 + HNRNPC chr14 21702388 - Exonic hg19 ESCA TCGA-JY-A93D 2 5'UTR-5'UTR Inter-chr p11.2 Transcription factor q11.2 4710 ChimerSeq FusionScan TCGA_RNA-Seq IFIT2-PBX2 IFIT2 chr10 91061885 + PBX2 chr6 32155559 - Exonic hg19 ESCA TCGA-JY-A93D 2 CDS-5'UTR Inter-chr q23.31 p21.32 Transcription factor 4711 ChimerSeq FusionScan TCGA_RNA-Seq RBM39-C22orf24 RBM39 chr20 34326889 - C22orf24 chr22 32334101 - Exonic hg19 ESCA TCGA-L5-A8NF 22 CDS-5'UTR Inter-chr q11.22 q12.3 Seq+ 4712 ChimerSeq FusionScan TCGA_RNA-Seq BAIAP2L1-ANKIB1 BAIAP2L1 chr7 97933507 - ANKIB1 chr7 91924202 + Exonic hg19 ESCA TCGA-L5-A8NF 9 CDS-5'UTR Intra-chr q22.1 q21.2 Seq+ 4713 ChimerSeq FusionScan TCGA_RNA-Seq STARD10-DAGLA STARD10 chr11 72492019 - DAGLA chr11 61487583 + Exonic hg19 ESCA TCGA-L5-A8NF 3 CDS-5'UTR Intra-chr q13.4 q12.2 4714 ChimerSeq FusionScan TCGA_RNA-Seq ARRB1-FCHSD2 ARRB1 chr11 75062631 - FCHSD2 chr11 72726930 - Exonic hg19 ESCA TCGA-L5-A8NF 3 Out-of-Frame Intra-chr q13.4 q13.4 4715 ChimerSeq FusionScan TCGA_RNA-Seq PUS7L-CPSF6 PUS7L chr12 44152532 - CPSF6 chr12 69646830 + Exonic hg19 ESCA TCGA-L5-A8NF 3 5'UTR-CDS Intra-chr q12 q15 Seq+ 4716 ChimerSeq FusionScan TCGA_RNA-Seq ZNF234-DDX42 ZNF234 chr19 44654658 + DDX42 chr17 61887872 + Exonic hg19 ESCA TCGA-L5-A8NF 2 In-Frame Inter-chr q13.31 Transcription factor q23.3 4717 ChimerSeq FusionScan TCGA_RNA-Seq CDH1-CIRH1A CDH1 chr16 68849662 + CIRH1A chr16 69194258 + Exonic hg19 ESCA TCGA-L5-A8NF 2 Out-of-Frame Intra-chr q22.1 Oncogene Tumor suppressor gene 4718 ChimerSeq FusionScan TCGA_RNA-Seq STAG1-MKI67 STAG1 chr3 136341987 - MKI67 chr10 129917583 - Exonic hg19 ESCA TCGA-L5-A8NF 2 Out-of-Frame Inter-chr q22.3 q26.2 4719 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D15-PTPRR TBC1D15 chr12 72266783 + PTPRR chr12 71286757 - Exonic hg19 ESCA TCGA-L5-A8NF 2 Out-of-Frame Intra-chr q21.1 q15 Seq+ 4720 ChimerSeq FusionScan TCGA_RNA-Seq VCL-ADK VCL chr10 75802911 + ADK chr10 76349039 + Exonic hg19 ESCA TCGA-L5-A8NF 2 Out-of-Frame Intra-chr q22.2 q22.2 Seq+ 4721 ChimerSeq FusionScan TCGA_RNA-Seq FUT8-FNTB FUT8 chr14 65879932 + FNTB chr14 65479034 + Exonic hg19 ESCA TCGA-L5-A8NS 4 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 4722 ChimerSeq FusionScan TCGA_RNA-Seq BECN1-AP2B1 BECN1 chr17 40965965 - AP2B1 chr17 34036242 + Exonic hg19 ESCA TCGA-L5-A8NS 2 In-Frame Intra-chr q21.31 Tumor suppressor gene q12 Seq+ 4723 ChimerSeq FusionScan TCGA_RNA-Seq ARAP1-IL12RB2 ARAP1 chr11 72404369 - IL12RB2 chr1 67816552 + Exonic hg19 ESCA TCGA-L5-A8NS 2 In-Frame Inter-chr q13.4 p31.3 Seq+ 4724 ChimerSeq FusionScan TCGA_RNA-Seq DYNLL1-RNF10 DYNLL1 chr12 120934356 + RNF10 chr12 120992520 + Exonic hg19 ESCA TCGA-LN-A4A9 12 Out-of-Frame Intra-chr q24.31 q24.31 Seq+ 4725 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 ESCA TCGA-LN-A4A9 4 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 4726 ChimerSeq FusionScan TCGA_RNA-Seq ACTR5-FBXO18 ACTR5 chr20 37396239 + FBXO18 chr10 5944982 + Exonic hg19 ESCA TCGA-LN-A4A9 2 Out-of-Frame Inter-chr q11.23 p15.1 4727 ChimerSeq FusionScan TCGA_RNA-Seq HDLBP-LRRFIP1 HDLBP chr2 242202125 - LRRFIP1 chr2 238688064 + Exonic hg19 ESCA TCGA-LN-A4A9 2 In-Frame Intra-chr q37.3 q37.3 4728 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0146-BLK KIAA0146 chr8 48206619 + BLK chr8 11400732 + Exonic hg19 ESCA TCGA-JY-A93E 3 CDS-5'UTR Intra-chr p23.1 TK:Src 4729 ChimerSeq FusionScan TCGA_RNA-Seq BAIAP2L1-TRRAP BAIAP2L1 chr7 97984353 - TRRAP chr7 98545843 + Exonic hg19 ESCA TCGA-JY-A93E 2 Out-of-Frame Intra-chr q22.1 q22.1 Atypical:PIKK Oncogene 4730 ChimerSeq FusionScan TCGA_RNA-Seq CES4A-ACHE CES4A chr16 67040720 + ACHE chr7 100488959 - Exonic hg19 ESCA TCGA-L5-A4OE 3 In-Frame Inter-chr q22.1 q22.1 Tumor suppressor gene 4731 ChimerSeq FusionScan TCGA_RNA-Seq RBM47-RAPGEF2 RBM47 chr4 40631412 - RAPGEF2 chr4 160225493 + Exonic hg19 ESCA TCGA-L5-A4OE 2 5'UTR-CDS Intra-chr p14 q32.1 4732 ChimerSeq FusionScan TCGA_RNA-Seq SEMA7A-WIPI2 SEMA7A chr15 74726081 - WIPI2 chr7 5267734 + Exonic hg19 ESCA TCGA-L5-A4OE 2 Out-of-Frame Inter-chr q24.1 p22.1 4733 ChimerSeq FusionScan TCGA_RNA-Seq NPAT-RSL1D1 NPAT chr11 108093226 - RSL1D1 chr16 11933842 - Exonic hg19 ESCA TCGA-L5-A4OE 2 Out-of-Frame Inter-chr q22.3 p13.13 4734 ChimerSeq FusionScan TCGA_RNA-Seq PTPRC-HNRPLL PTPRC chr1 198661502 + HNRPLL chr2 38818790 - Exonic hg19 ESCA TCGA-L5-A4OE 2 Out-of-Frame Inter-chr Tumor suppressor gene 4735 ChimerSeq FusionScan TCGA_RNA-Seq SMYD3-TFB2M SMYD3 chr1 246518332 - TFB2M chr1 246720836 - Exonic hg19 ESCA TCGA-L5-A4OE 2 In-Frame Intra-chr q44 Transcription factor q44 Seq+ 4736 ChimerSeq FusionScan TCGA_RNA-Seq FRMD6-SMCHD1 FRMD6 chr14 52182217 + SMCHD1 chr18 2666155 + Exonic hg19 ESCA TCGA-L5-A4OE 2 Out-of-Frame Inter-chr q22.1 p11.32 Tumor suppressor gene 4737 ChimerSeq FusionScan TCGA_RNA-Seq UBP1-TFCP2L1 UBP1 chr3 33453072 - TFCP2L1 chr2 122004546 - Exonic hg19 ESCA TCGA-L5-A4OE 2 In-Frame Inter-chr p22.3 Transcription factor q14.2 Transcription factor 4738 ChimerSeq FusionScan TCGA_RNA-Seq FAM175A-MRPS18C FAM175A chr4 84384646 - MRPS18C chr4 84380892 + Exonic hg19 ESCA TCGA-LN-A9FO 2 Out-of-Frame Intra-chr q21.23 q21.23 4739 ChimerSeq FusionScan TCGA_RNA-Seq IGHMBP2-CPT1A IGHMBP2 chr11 68685351 + CPT1A chr11 68582955 - Exonic hg19 ESCA TCGA-LN-A9FO 2 CDS-5'UTR Intra-chr q13.3 q13.3 Seq+ 4740 ChimerSeq FusionScan TCGA_RNA-Seq PDPR-DDHD2 PDPR chr16 70154622 + DDHD2 chr8 38117557 + Exonic hg19 ESCA TCGA-LN-A9FO 2 In-Frame Inter-chr q22.1 p11.23 4741 ChimerSeq FusionScan TCGA_RNA-Seq TOX2-PSMB1 TOX2 chr20 42543630 + PSMB1 chr6 170858201 - Exonic hg19 ESCA TCGA-LN-A9FO 2 Out-of-Frame Inter-chr q13.12 4742 ChimerSeq FusionScan TCGA_RNA-Seq TACC3-SCO2 TACC3 chr4 1737561 + SCO2 chr22 50962853 - Exonic hg19 ESCA TCGA-LN-A9FO 2 CDS-5'UTR Inter-chr p16.3 q13.33 4743 ChimerSeq FusionScan TCGA_RNA-Seq WDR61-RAD21 WDR61 chr15 78581960 - RAD21 chr8 117859930 - Exonic hg19 ESCA TCGA-LN-A9FO 2 Out-of-Frame Inter-chr q25.1 q24.11 4744 ChimerSeq FusionScan TCGA_RNA-Seq ZNF420-DPF1 ZNF420 chr19 37582023 + DPF1 chr19 38704396 - Exonic hg19 ESCA TCGA-XP-A8T6 7 In-Frame Intra-chr q13.12 Transcription factor q13.2 Transcription factor Seq+ 4745 ChimerSeq FusionScan TCGA_RNA-Seq CYP4F11-FAM95B1 CYP4F11 chr19 16038021 - FAM95B1 chr9 42470479 + Exonic hg19 ESCA TCGA-XP-A8T6 4 CDS-5'UTR Inter-chr p13.12 p11.2 4746 ChimerSeq FusionScan TCGA_RNA-Seq OTUD7B-EPAS1 OTUD7B chr1 149949360 - EPAS1 chr2 46596965 + Exonic hg19 ESCA TCGA-XP-A8T6 2 Out-of-Frame Inter-chr q21.2 p21 Tumor suppressor gene Transcription factor 4747 ChimerSeq FusionScan TCGA_RNA-Seq ACTR3C-AUH ACTR3C chr7 149981841 - AUH chr9 94087686 - Exonic hg19 ESCA TCGA-XP-A8T6 2 Out-of-Frame Inter-chr q36.1 q22.31 4748 ChimerSeq FusionScan TCGA_RNA-Seq ACER3-FCHSD2 ACER3 chr11 76572123 + FCHSD2 chr11 72613683 - Exonic hg19 ESCA TCGA-XP-A8T6 2 Out-of-Frame Intra-chr q13.5 q13.4 4749 ChimerSeq FusionScan TCGA_RNA-Seq RASSF8-CASC1 RASSF8 chr12 26148063 + CASC1 chr12 25308346 - Exonic hg19 ESCA TCGA-Z6-A8JE 4 5'UTR-CDS Intra-chr p12.1 Tumor suppressor gene p12.1 Tumor suppressor gene Seq+ 4750 ChimerSeq FusionScan TCGA_RNA-Seq GRHL2-CDC42 GRHL2 chr8 102505017 + CDC42 chr1 22404921 + Exonic hg19 ESCA TCGA-Z6-A8JE 2 CDS-5'UTR Inter-chr q22.3 Transcription factor p36.12 4751 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPF-ANKLE2 HNRNPF chr10 43904578 - ANKLE2 chr12 133331719 - Exonic hg19 ESCA TCGA-Z6-A8JE 2 5'UTR-CDS Inter-chr q11.21 q24.33 4752 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57746301 + VMP1 chr17 57915655 + Exonic hg19 ESCA TCGA-LN-A7HY 4 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 4753 ChimerSeq FusionScan TCGA_RNA-Seq ASAP2-CPSF3 ASAP2 chr2 9475308 + CPSF3 chr2 9573999 + Exonic hg19 ESCA TCGA-LN-A7HY 4 In-Frame Intra-chr p25.1 p25.1 Seq+ 4754 ChimerSeq FusionScan TCGA_RNA-Seq NEK7-PTPRC NEK7 chr1 198126406 + PTPRC chr1 198608355 + Exonic hg19 ESCA TCGA-LN-A7HY 3 5'UTR-5'UTR Intra-chr q31.3 Other:NEK Tumor suppressor gene Seq+ 4755 ChimerSeq FusionScan TCGA_RNA-Seq CTPS2-AKAP8 CTPS2 chrX 16711263 - AKAP8 chr19 15480990 - Exonic hg19 ESCA TCGA-LN-A7HY 2 In-Frame Inter-chr p22.2 p13.12 Transcription factor 4756 ChimerSeq FusionScan TCGA_RNA-Seq CYB5R1-LAMA5 CYB5R1 chr1 202935876 - LAMA5 chr20 60903501 - Exonic hg19 ESCA TCGA-LN-A7HY 2 Out-of-Frame Inter-chr q32.1 q13.33 4757 ChimerSeq FusionScan TCGA_RNA-Seq ASAP2-CPSF3 ASAP2 chr2 9468040 + CPSF3 chr2 9568893 + Exonic hg19 ESCA TCGA-2H-A9GQ 23 In-Frame Intra-chr p25.1 p25.1 Seq+ 4758 ChimerSeq FusionScan TCGA_RNA-Seq UHRF1BP1-ANKS1A UHRF1BP1 chr6 34825694 + ANKS1A chr6 35050467 + Exonic hg19 ESCA TCGA-2H-A9GQ 17 In-Frame Intra-chr p21.31 p21.31 Seq+ 4759 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R2A-DPYSL2 PPP2R2A chr8 26196503 + DPYSL2 chr8 26439484 + Exonic hg19 ESCA TCGA-2H-A9GQ 8 In-Frame Intra-chr p21.2 p21.2 Seq+ 4760 ChimerSeq FusionScan TCGA_RNA-Seq FAM172A-FLJ42709 FAM172A chr5 93294481 - FLJ42709 chr5 92774447 - Exonic hg19 ESCA TCGA-2H-A9GQ 7 CDS-3'UTR Intra-chr q15 Tumor suppressor gene Seq+ 4761 ChimerSeq FusionScan TCGA_RNA-Seq RNF111-TLN2 RNF111 chr15 59280267 + TLN2 chr15 63084839 + Exonic hg19 ESCA TCGA-2H-A9GQ 6 5'UTR-CDS Intra-chr q22.1 Tumor suppressor gene q22.2 Seq+ 4762 ChimerSeq FusionScan TCGA_RNA-Seq DMXL1-TNFAIP8 DMXL1 chr5 118569162 + TNFAIP8 chr5 118728510 + Exonic hg19 ESCA TCGA-2H-A9GQ 5 Out-of-Frame Intra-chr q23.1 q23.1 Seq+ 4763 ChimerSeq FusionScan TCGA_RNA-Seq NUDC-TRNP1 NUDC chr1 27250657 + TRNP1 chr1 27326337 + Exonic hg19 ESCA TCGA-2H-A9GQ 4 CDS-3'UTR Intra-chr p36.11 p36.11 4764 ChimerSeq FusionScan TCGA_RNA-Seq SUV420H1-CHKA SUV420H1 chr11 67938481 - CHKA chr11 67842297 - Exonic hg19 ESCA TCGA-2H-A9GQ 4 Out-of-Frame Intra-chr q13.2 4765 ChimerSeq FusionScan TCGA_RNA-Seq PSMD1-ARMC9 PSMD1 chr2 231951895 + ARMC9 chr2 232196504 + Exonic hg19 ESCA TCGA-2H-A9GQ 4 Out-of-Frame Intra-chr q37.1 q37.1 Seq+ 4766 ChimerSeq FusionScan TCGA_RNA-Seq FAM172A-FLJ42709 FAM172A chr5 93294481 - FLJ42709 chr5 92747215 - Exonic hg19 ESCA TCGA-2H-A9GQ 4 CDS-3'UTR Intra-chr q15 Tumor suppressor gene Seq+ 4767 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1L1-LSM1 WHSC1L1 chr8 38239316 - LSM1 chr8 38021358 - Exonic hg19 ESCA TCGA-2H-A9GQ 4 5'UTR-CDS Intra-chr p11.23 Tumor suppressor gene p11.23 Seq+ 4768 ChimerSeq FusionScan TCGA_RNA-Seq MGA-MAPKBP1 MGA chr15 41962156 + MAPKBP1 chr15 42092020 + Exonic hg19 ESCA TCGA-2H-A9GQ 4 Out-of-Frame Intra-chr q15.1 Transcription factor q15.1 Seq+ 4769 ChimerSeq FusionScan TCGA_RNA-Seq EIF2C2-TRAPPC9 EIF2C2 chr8 141645583 - TRAPPC9 chr8 141321473 - Exonic hg19 ESCA TCGA-2H-A9GQ 4 In-Frame Intra-chr q24.3 4770 ChimerSeq FusionScan TCGA_RNA-Seq MAP4K5-L2HGDH MAP4K5 chr14 50901111 - L2HGDH chr14 50736048 - Exonic hg19 ESCA TCGA-2H-A9GQ 3 Out-of-Frame Intra-chr q22.1 q21.3 Seq+ 4771 ChimerSeq FusionScan TCGA_RNA-Seq IQCH-MAP2K5 IQCH chr15 67553732 + MAP2K5 chr15 68098983 + Exonic hg19 ESCA TCGA-2H-A9GQ 3 In-Frame Intra-chr q23 q23 STE:STE7 Seq+ 4772 ChimerSeq FusionScan TCGA_RNA-Seq ANKS1B-UHRF1BP1L ANKS1B chr12 100377881 - UHRF1BP1L chr12 100444096 - Exonic hg19 ESCA TCGA-2H-A9GQ 3 Out-of-Frame Intra-chr q23.1 q23.1 Seq+ 4773 ChimerSeq FusionScan TCGA_RNA-Seq LYPLAL1-KCTD3 LYPLAL1 chr1 219352588 + KCTD3 chr1 215768697 + Exonic hg19 ESCA TCGA-2H-A9GQ 2 Out-of-Frame Intra-chr q41 q41 4774 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0319L-SFPQ KIAA0319L chr1 35972212 - SFPQ chr1 35657130 - Exonic hg19 ESCA TCGA-2H-A9GQ 2 In-Frame Intra-chr p34.3 p34.3 4775 ChimerSeq FusionScan TCGA_RNA-Seq PCDH15-FAM134C PCDH15 chr10 56423931 - FAM134C chr17 40744180 - Exonic hg19 ESCA TCGA-2H-A9GQ 2 Out-of-Frame Inter-chr q21.1 4776 ChimerSeq FusionScan TCGA_RNA-Seq EIF2C2-TRAPPC9 EIF2C2 chr8 141645583 - TRAPPC9 chr8 141034176 - Exonic hg19 ESCA TCGA-2H-A9GQ 2 Out-of-Frame Intra-chr q24.3 4777 ChimerSeq FusionScan TCGA_RNA-Seq NT5C2-NRD1 NT5C2 chr10 104934614 - NRD1 chr1 52306186 - Exonic hg19 ESCA TCGA-2H-A9GQ 2 In-Frame Inter-chr q24.33 4778 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-RPL22 RCC1 chr1 28834672 + RPL22 chr1 6257816 - Exonic hg19 ESCA TCGA-2H-A9GQ 2 5'UTR-CDS Intra-chr p35.3 p36.31 Seq+ 4779 ChimerSeq FusionScan TCGA_RNA-Seq SDHC-MPZ SDHC chr1 161284215 + MPZ chr1 161277214 - Exonic hg19 ESCA TCGA-2H-A9GQ 2 Out-of-Frame Intra-chr q23.3 Oncogene q23.3 4780 ChimerSeq FusionScan TCGA_RNA-Seq DDX50-STOX1 DDX50 chr10 70679737 + STOX1 chr10 70652344 + Exonic hg19 ESCA TCGA-R6-A6Y0 5 In-Frame Intra-chr q22.1 q22.1 Seq+ 4781 ChimerSeq FusionScan TCGA_RNA-Seq SPRR3-SERINC2 SPRR3 chr1 152974269 + SERINC2 chr1 31905813 + Exonic hg19 ESCA TCGA-R6-A6Y0 2 5'UTR-CDS Intra-chr q21.3 p35.2 4782 ChimerSeq FusionScan TCGA_RNA-Seq MAPKAPK2-SRGAP2P2 MAPKAPK2 chr1 206858853 + SRGAP2P2 chr1 144094361 + Exonic hg19 ESCA TCGA-R6-A6Y0 2 CDS-5'UTR Intra-chr q32.1 CAMK:MAPKAPK 4783 ChimerSeq FusionScan TCGA_RNA-Seq PRKAR1B-SUN1 PRKAR1B chr7 766846 - SUN1 chr7 872141 + Exonic hg19 ESCA TCGA-R6-A6Y0 2 5'UTR-5'UTR Intra-chr p22.3 p22.3 4784 ChimerSeq FusionScan TCGA_RNA-Seq USP18-PPP2R5E USP18 chr22 18632989 + PPP2R5E chr14 63888812 - Exonic hg19 ESCA TCGA-R6-A6Y0 2 5'UTR-CDS Inter-chr q11.21 q23.2 4785 ChimerSeq FusionScan TCGA_RNA-Seq MPP5-GPHN MPP5 chr14 67784196 + GPHN chr14 67555699 + Exonic hg19 ESCA TCGA-R6-A6Y0 2 In-Frame Intra-chr q23.3 q23.3 Seq+ 4786 ChimerSeq FusionScan TCGA_RNA-Seq ZFAND3-FTSJD2 ZFAND3 chr6 37897775 + FTSJD2 chr6 37446184 + Exonic hg19 ESCA TCGA-R6-A6Y0 2 Out-of-Frame Intra-chr p21.2 4787 ChimerSeq FusionScan TCGA_RNA-Seq AZIN1-EIF3H AZIN1 chr8 103876034 - EIF3H chr8 117671219 - Exonic hg19 ESCA TCGA-R6-A6Y0 2 5'UTR-CDS Intra-chr q22.3 q24.11 4788 ChimerSeq FusionScan TCGA_RNA-Seq NFKB1-PDLIM5 NFKB1 chr4 103459113 + PDLIM5 chr4 95494501 + Exonic hg19 ESCA TCGA-R6-A6Y0 2 Out-of-Frame Intra-chr q24 Oncogene Tumor suppressor gene Transcription factor q22.3 4789 ChimerSeq FusionScan TCGA_RNA-Seq GNB2L1-MAP4 GNB2L1 chr5 180666066 - MAP4 chr3 47913590 - Exonic hg19 ESCA TCGA-R6-A6Y0 2 In-Frame Inter-chr Tumor suppressor gene p21.31 4790 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB43-RALGPS1 ZBTB43 chr9 129571194 + RALGPS1 chr9 129724503 + Exonic hg19 ESCA TCGA-R6-A6Y0 2 5'UTR-5'UTR Intra-chr q33.3 Transcription factor q33.3 4791 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175394270 - Exonic hg19 ESCA TCGA-LN-A4A6 7 5'UTR-CDS Inter-chr q21.1 q35.2 4792 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175388437 - Exonic hg19 ESCA TCGA-LN-A4A6 6 5'UTR-CDS Inter-chr q21.1 q35.2 4793 ChimerSeq FusionScan TCGA_RNA-Seq RB1-ITM2B RB1 chr13 48881542 + ITM2B chr13 48827943 + Exonic hg19 ESCA TCGA-LN-A4A6 3 In-Frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Seq+ 4794 ChimerSeq FusionScan TCGA_RNA-Seq CHST8-NOTCH2NL CHST8 chr19 34113202 + NOTCH2NL chr1 145248812 + Exonic hg19 ESCA TCGA-LN-A4A6 2 5'UTR-5'UTR Inter-chr q13.11 q21.1 4795 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA4-PHF14 NDUFA4 chr7 10979642 - PHF14 chr7 11150976 + Exonic hg19 ESCA TCGA-LN-A4A6 2 CDS-5'UTR Intra-chr p21.3 p21.3 Seq+ 4796 ChimerSeq FusionScan TCGA_RNA-Seq FZD6-EIF3E FZD6 chr8 104312512 + EIF3E chr8 109254142 - Exonic hg19 ESCA TCGA-LN-A4A6 2 In-Frame Intra-chr q22.3 q23.1 4797 ChimerSeq FusionScan TCGA_RNA-Seq FAM185A-FBXL13 FAM185A chr7 102427916 + FBXL13 chr7 102453978 - Exonic hg19 ESCA TCGA-LN-A4A6 2 Out-of-Frame Intra-chr q22.1 q22.1 Tumor suppressor gene 4798 ChimerSeq FusionScan TCGA_RNA-Seq RAD51-HNRNPH1 RAD51 chr15 41011097 + HNRNPH1 chr5 179043959 - Exonic hg19 ESCA TCGA-LN-A4A6 2 Out-of-Frame Inter-chr q15.1 q35.3 4799 ChimerSeq FusionScan TCGA_RNA-Seq FAM168A-PPP6R3 FAM168A chr11 73308967 - PPP6R3 chr11 68286968 + Exonic hg19 ESCA TCGA-LN-A4A6 2 5'UTR-5'UTR Intra-chr q13.4 q13.2 4800 ChimerSeq FusionScan TCGA_RNA-Seq C12orf51-CNOT2 C12orf51 chr12 112666450 - CNOT2 chr12 70704674 + Exonic hg19 ESCA TCGA-LN-A4A6 2 In-Frame Intra-chr q15 4801 ChimerSeq FusionScan TCGA_RNA-Seq USP13-SKIL USP13 chr3 179371181 + SKIL chr3 170077486 + Exonic hg19 ESCA TCGA-LN-A4A6 2 CDS-5'UTR Intra-chr q26.33 q26.2 Tumor suppressor gene Transcription factor 4802 ChimerSeq FusionScan TCGA_RNA-Seq NEK7-PTPRC NEK7 chr1 198126406 + PTPRC chr1 198608355 + Exonic hg19 ESCA TCGA-LN-A7HY 11 5'UTR-5'UTR Intra-chr q31.3 Other:NEK Tumor suppressor gene Seq+ 4803 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57746301 + VMP1 chr17 57915655 + Exonic hg19 ESCA TCGA-LN-A7HY 7 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 4804 ChimerSeq FusionScan TCGA_RNA-Seq ASAP2-CPSF3 ASAP2 chr2 9475308 + CPSF3 chr2 9573999 + Exonic hg19 ESCA TCGA-LN-A7HY 7 In-Frame Intra-chr p25.1 p25.1 Seq+ 4805 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0825-FAM172A KIAA0825 chr5 93918137 - FAM172A chr5 93300228 - Exonic hg19 ESCA TCGA-LN-A7HY 2 5'UTR-CDS Intra-chr q15 q15 Tumor suppressor gene 4806 ChimerSeq FusionScan TCGA_RNA-Seq SLC10A6-NUP214 SLC10A6 chr4 87769891 - NUP214 chr9 134090598 + Exonic hg19 ESCA TCGA-LN-A7HY 2 Out-of-Frame Inter-chr q21.3 q34.13 Oncogene 4807 ChimerSeq FusionScan TCGA_RNA-Seq CTPS2-AKAP8 CTPS2 chrX 16711263 - AKAP8 chr19 15480990 - Exonic hg19 ESCA TCGA-LN-A7HY 2 In-Frame Inter-chr p22.2 p13.12 Transcription factor 4808 ChimerSeq FusionScan TCGA_RNA-Seq CYB5R1-LAMA5 CYB5R1 chr1 202935876 - LAMA5 chr20 60903501 - Exonic hg19 ESCA TCGA-LN-A7HY 2 Out-of-Frame Inter-chr q32.1 q13.33 4809 ChimerSeq FusionScan TCGA_RNA-Seq EDIL3-DHFR EDIL3 chr5 83680125 - DHFR chr5 79933828 - Exonic hg19 ESCA TCGA-LN-A7HY 2 Out-of-Frame Intra-chr q14.3 q14.1 4810 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-DCUN1D1 TBL1XR1 chr3 176914908 - DCUN1D1 chr3 182683541 - Exonic hg19 ESCA TCGA-LN-A8I1 18 5'UTR-CDS Intra-chr q26.32 q26.33 Oncogene Seq+ 4811 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-MCF2L2 TBL1XR1 chr3 176914908 - MCF2L2 chr3 183107567 - Exonic hg19 ESCA TCGA-LN-A8I1 11 5'UTR-CDS Intra-chr q26.32 q27.1 Seq+ 4812 ChimerSeq FusionScan TCGA_RNA-Seq NFE2L3-C16orf62 NFE2L3 chr7 26192688 + C16orf62 chr16 19680481 + Exonic hg19 ESCA TCGA-LN-A8I1 4 Out-of-Frame Inter-chr p15.2 Transcription factor p12.3 4813 ChimerSeq FusionScan TCGA_RNA-Seq CYP4F11-FAM95B1 CYP4F11 chr19 16038021 - FAM95B1 chr9 42470479 + Exonic hg19 ESCA TCGA-LN-A8I1 4 CDS-5'UTR Inter-chr p13.12 p11.2 4814 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-DCUN1D1 TBL1XR1 chr3 176914908 - DCUN1D1 chr3 182681837 - Exonic hg19 ESCA TCGA-LN-A8I1 3 5'UTR-CDS Intra-chr q26.32 q26.33 Oncogene Seq+ 4815 ChimerSeq FusionScan TCGA_RNA-Seq IQCE-CCDC57 IQCE chr7 2641098 + CCDC57 chr17 80086473 - Exonic hg19 ESCA TCGA-LN-A8I1 3 In-Frame Inter-chr p22.3 q25.3 4816 ChimerSeq FusionScan TCGA_RNA-Seq DST-AKR1C3 DST chr6 56494047 - AKR1C3 chr10 5144292 + Exonic hg19 ESCA TCGA-LN-A8I1 2 Out-of-Frame Inter-chr p12.1 Oncogene p15.1 4817 ChimerSeq FusionScan TCGA_RNA-Seq YWHAZ-MAL2 YWHAZ chr8 101960823 - MAL2 chr8 120233826 + Exonic hg19 ESCA TCGA-LN-A8I1 2 In-Frame Intra-chr q22.3 q24.12 4818 ChimerSeq FusionScan TCGA_RNA-Seq NUP35-VSNL1 NUP35 chr2 183998351 + VSNL1 chr2 17773336 + Exonic hg19 ESCA TCGA-LN-A8I1 2 CDS-5'UTR Intra-chr q32.1 p24.2 Tumor suppressor gene 4819 ChimerSeq FusionScan TCGA_RNA-Seq OXR1-KRT17 OXR1 chr8 107758090 + KRT17 chr17 39778006 - Exonic hg19 ESCA TCGA-LN-A8I1 2 Out-of-Frame Inter-chr q23.1 q21.2 4820 ChimerSeq FusionScan TCGA_RNA-Seq RPL24-CNBD1 RPL24 chr3 101401614 - CNBD1 chr8 88218220 + Exonic hg19 ESCA TCGA-LN-A8I1 2 In-Frame Inter-chr q12.3 q21.3 4821 ChimerSeq FusionScan TCGA_RNA-Seq AKR1B10-POLR2I AKR1B10 chr7 134215562 + POLR2I chr19 36605314 - Exonic hg19 ESCA TCGA-LN-A8I1 2 In-Frame Inter-chr q33 q13.12 4822 ChimerSeq FusionScan TCGA_RNA-Seq RAF1-DNMT1 RAF1 chr3 12650264 - DNMT1 chr19 10288043 - Exonic hg19 ESCA TCGA-LN-A8I1 2 Out-of-Frame Inter-chr p25.2 TKL:RAF Oncogene p13.2 Oncogene Tumor suppressor gene Transcription factor 4823 ChimerSeq FusionScan TCGA_RNA-Seq NFRKB-RRP1 NFRKB chr11 129765390 - RRP1 chr21 45222154 + Exonic hg19 ESCA TCGA-JY-A6FG 2 5'UTR-CDS Inter-chr q24.3 q22.3 4824 ChimerSeq FusionScan TCGA_RNA-Seq TECPR2-RCOR1 TECPR2 chr14 102918964 + RCOR1 chr14 103167614 + Exonic hg19 ESCA TCGA-JY-A6FG 2 In-Frame Intra-chr q32.31 q32.31 4825 ChimerSeq FusionScan TCGA_RNA-Seq C11orf80-UBAP2L C11orf80 chr11 66526567 + UBAP2L chr1 154231452 + Exonic hg19 ESCA TCGA-JY-A6FG 2 Out-of-Frame Inter-chr q13.2 q21.3 4826 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-PION PTPN12 chr7 77221573 + PION chr7 77035422 - Exonic hg19 ESCA TCGA-LN-A49U 3 Out-of-Frame Intra-chr q11.23 Tumor suppressor gene Seq+ 4827 ChimerSeq FusionScan TCGA_RNA-Seq BIRC6-TTC27 BIRC6 chr2 32695369 + TTC27 chr2 33002948 + Exonic hg19 ESCA TCGA-LN-A49U 3 Out-of-Frame Intra-chr p22.3 p22.3 Seq+ 4828 ChimerSeq FusionScan TCGA_RNA-Seq ASPSCR1-SLC16A3 ASPSCR1 chr17 79943483 + SLC16A3 chr17 80193858 + Exonic hg19 ESCA TCGA-LN-A49U 2 5'UTR-5'UTR Intra-chr q25.3 q25.3 4829 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-BAGE5 MLL3 chr7 151960100 - BAGE5 chr21 11026839 - Exonic hg19 ESCA TCGA-2H-A9GL 4 CDS-3'UTR Inter-chr Tumor suppressor gene 4830 ChimerSeq FusionScan TCGA_RNA-Seq MYO9B-VPS13A MYO9B chr19 17213367 + VPS13A chr9 80018151 + Exonic hg19 ESCA TCGA-2H-A9GL 2 In-Frame Inter-chr p13.11 q21.2 4831 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-CCDC138 RCC1 chr1 28834672 + CCDC138 chr2 109455640 + Exonic hg19 ESCA TCGA-2H-A9GL 2 5'UTR-CDS Inter-chr p35.3 q13 4832 ChimerSeq FusionScan TCGA_RNA-Seq AGAP1-WRB AGAP1 chr2 236403493 + WRB chr21 40762623 + Exonic hg19 ESCA TCGA-2H-A9GL 2 Out-of-Frame Inter-chr q37.2 q22.2 4833 ChimerSeq FusionScan TCGA_RNA-Seq RAB27A-RNGTT RAB27A chr15 55562362 - RNGTT chr6 89388138 - Exonic hg19 ESCA TCGA-2H-A9GL 2 5'UTR-CDS Inter-chr q21.3 q15 4834 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 ESCA TCGA-2H-A9GL 2 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 4835 ChimerSeq FusionScan TCGA_RNA-Seq LDB2-C4orf34 LDB2 chr4 16760780 - C4orf34 chr4 39606800 - Exonic hg19 ESCA TCGA-2H-A9GL 2 CDS-5'UTR Intra-chr p15.32 4836 ChimerSeq FusionScan TCGA_RNA-Seq MAP4K4-OGT MAP4K4 chr2 102315000 + OGT chrX 70764416 + Exonic hg19 ESCA TCGA-L5-A8NU 3 In-Frame Inter-chr q11.2 q13.1 4837 ChimerSeq FusionScan TCGA_RNA-Seq EI24-RBM42 EI24 chr11 125448964 + RBM42 chr19 36128343 + Exonic hg19 ESCA TCGA-L5-A8NU 2 Out-of-Frame Inter-chr q24.2 Tumor suppressor gene q13.12 4838 ChimerSeq FusionScan TCGA_RNA-Seq ATXN7-PEX7 ATXN7 chr3 63965843 + PEX7 chr6 137219279 + Exonic hg19 ESCA TCGA-L5-A8NU 2 In-Frame Inter-chr p14.1 q23.3 4839 ChimerSeq FusionScan TCGA_RNA-Seq CARHSP1-MVP CARHSP1 chr16 8962822 - MVP chr16 29841835 + Exonic hg19 ESCA TCGA-L5-A8NU 2 5'UTR-5'UTR Intra-chr p13.2 p11.2 4840 ChimerSeq FusionScan TCGA_RNA-Seq CYP4F11-FAM95B1 CYP4F11 chr19 16038021 - FAM95B1 chr9 42470479 + Exonic hg19 ESCA TCGA-V5-A7RC 4 CDS-5'UTR Inter-chr p13.12 p11.2 4841 ChimerSeq FusionScan TCGA_RNA-Seq NCK1-IL20RB NCK1 chr3 136647069 + IL20RB chr3 136699307 + Exonic hg19 ESCA TCGA-V5-A7RC 3 In-Frame Intra-chr q22.3 q22.3 Seq+ 4842 ChimerSeq FusionScan TCGA_RNA-Seq MBOAT7-DPY19L3 MBOAT7 chr19 54692070 - DPY19L3 chr19 32944050 + Exonic hg19 ESCA TCGA-V5-A7RC 2 In-Frame Intra-chr q13.11 4843 ChimerSeq FusionScan TCGA_RNA-Seq TAOK1-APEX1 TAOK1 chr17 27794234 + APEX1 chr14 20923736 + Exonic hg19 ESCA TCGA-V5-A7RC 2 CDS-5'UTR Inter-chr q11.2 q11.2 Oncogene 4844 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0146-C3orf39 KIAA0146 chr8 48203726 + C3orf39 chr3 43123028 - Exonic hg19 ESCA TCGA-Q9-A6FU 11 CDS-5'UTR Inter-chr 4845 ChimerSeq FusionScan TCGA_RNA-Seq GAB1-PPP2R2C GAB1 chr4 144361535 + PPP2R2C chr4 6349737 - Exonic hg19 ESCA TCGA-Q9-A6FU 5 In-Frame Intra-chr q31.21 p16.1 Tumor suppressor gene Seq+ 4846 ChimerSeq FusionScan TCGA_RNA-Seq MEX3D-TCF3 MEX3D chr19 1567462 - TCF3 chr19 1646426 - Exonic hg19 ESCA TCGA-Q9-A6FU 4 Out-of-Frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Transcription factor Seq+ 4847 ChimerSeq FusionScan TCGA_RNA-Seq FAM83A-PDS5A FAM83A chr8 124206388 + PDS5A chr4 39827108 - Exonic hg19 ESCA TCGA-Q9-A6FU 2 In-Frame Inter-chr q24.13 p14 4848 ChimerSeq FusionScan TCGA_RNA-Seq GCLC-FAM204A GCLC chr6 53409293 - FAM204A chr10 120085755 - Exonic hg19 ESCA TCGA-V5-A7RC 2 In-Frame Inter-chr p12.1 q26.11 4849 ChimerSeq FusionScan TCGA_RNA-Seq DSP-COL4A1 DSP chr6 7568139 + COL4A1 chr13 110817337 - Exonic hg19 ESCA TCGA-V5-A7RC 2 Out-of-Frame Inter-chr p24.3 Tumor suppressor gene q34 4850 ChimerSeq FusionScan TCGA_RNA-Seq FAM134C-AP2B1 FAM134C chr17 40738782 - AP2B1 chr17 34001194 + Exonic hg19 ESCA TCGA-L5-A8NH 29 In-Frame Intra-chr q12 Seq+ 4851 ChimerSeq FusionScan TCGA_RNA-Seq CPT1A-RNFT1 CPT1A chr11 68527036 - RNFT1 chr17 58031507 - Exonic hg19 ESCA TCGA-L5-A8NH 18 In-Frame Inter-chr q13.3 q23.1 Seq+ 4852 ChimerSeq FusionScan TCGA_RNA-Seq CPT1A-RNFT1 CPT1A chr11 68527036 - RNFT1 chr17 58030472 - Exonic hg19 ESCA TCGA-L5-A8NH 16 In-Frame Inter-chr q13.3 q23.1 Seq+ 4853 ChimerSeq FusionScan TCGA_RNA-Seq PTP4A1-NOTCH3 PTP4A1 chr6 64282624 + NOTCH3 chr19 15281636 - Exonic hg19 ESCA TCGA-L5-A8NH 12 5'UTR-CDS Inter-chr q12 p13.12 Oncogene Tumor suppressor gene Seq+ 4854 ChimerSeq FusionScan TCGA_RNA-Seq PTP4A1-NOTCH3 PTP4A1 chr6 64282624 + NOTCH3 chr19 15280981 - Exonic hg19 ESCA TCGA-L5-A8NH 7 5'UTR-CDS Inter-chr q12 p13.12 Oncogene Tumor suppressor gene Seq+ 4855 ChimerSeq FusionScan TCGA_RNA-Seq ATP6V0A1-STAT3 ATP6V0A1 chr17 40666478 + STAT3 chr17 40498731 - Exonic hg19 ESCA TCGA-L5-A8NH 7 In-Frame Intra-chr q21.2 q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 4856 ChimerSeq FusionScan TCGA_RNA-Seq ZNF827-ANAPC10 ZNF827 chr4 146744573 - ANAPC10 chr4 145916755 - Exonic hg19 ESCA TCGA-L5-A8NH 4 Out-of-Frame Intra-chr q31.22 Transcription factor q31.21 Seq+ 4857 ChimerSeq FusionScan TCGA_RNA-Seq PTP4A1-NOTCH3 PTP4A1 chr6 64282624 + NOTCH3 chr19 15276902 - Exonic hg19 ESCA TCGA-L5-A8NH 4 5'UTR-CDS Inter-chr q12 p13.12 Oncogene Tumor suppressor gene Seq+ 4858 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R12A-IRAK3 PPP1R12A chr12 80214553 - IRAK3 chr12 66610950 + Exonic hg19 ESCA TCGA-L5-A8NH 2 Out-of-Frame Intra-chr q21.31 q14.3 TKL:IRAK 4859 ChimerSeq FusionScan TCGA_RNA-Seq ZNF696-MED16 ZNF696 chr8 144375235 + MED16 chr19 880148 - Exonic hg19 ESCA TCGA-L5-A8NH 2 In-Frame Inter-chr q24.3 Transcription factor p13.3 4860 ChimerSeq FusionScan TCGA_RNA-Seq GPR111-TNFRSF21 GPR111 chr6 47631313 + TNFRSF21 chr6 47221257 - Exonic hg19 ESCA TCGA-L5-A88Y 7 5'UTR-CDS Intra-chr p12.3 Seq+ 4861 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHA1-CYP2C19 PLEKHA1 chr10 124159904 + CYP2C19 chr10 96602593 + Exonic hg19 ESCA TCGA-L5-A88Y 5 In-Frame Intra-chr q26.13 q23.33 Oncogene Seq+ 4862 ChimerSeq FusionScan TCGA_RNA-Seq TXN-GNB1 TXN chr9 113007057 - GNB1 chr1 1720708 - Exonic hg19 ESCA TCGA-LN-A9FR 13 In-Frame Inter-chr q31.3 p36.33 Seq+ 4863 ChimerSeq FusionScan TCGA_RNA-Seq C18orf25-ZFPM2 C18orf25 chr18 43833786 + ZFPM2 chr8 106573590 + Exonic hg19 ESCA TCGA-LN-A9FR 6 Out-of-Frame Inter-chr q21.1 q22.3 Transcription factor 4864 ChimerSeq FusionScan TCGA_RNA-Seq MOB3B-NTM MOB3B chr9 27529552 - NTM chr11 131781457 + Exonic hg19 ESCA TCGA-LN-A9FR 5 5'UTR-CDS Inter-chr p21.2 q25 4865 ChimerSeq FusionScan TCGA_RNA-Seq ZNF160-PRKAR1A ZNF160 chr19 53594665 - PRKAR1A chr17 66521894 + Exonic hg19 ESCA TCGA-LN-A9FR 2 5'UTR-CDS Inter-chr q13.42 Transcription factor q24.2 Oncogene Tumor suppressor gene 4866 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0355-GPI KIAA0355 chr19 34745519 + GPI chr19 34868407 + Exonic hg19 ESCA TCGA-LN-A9FR 2 5'UTR-CDS Intra-chr 4867 ChimerSeq FusionScan TCGA_RNA-Seq CUX1-PCBP2 CUX1 chr7 101459373 + PCBP2 chr12 53848509 + Exonic hg19 ESCA TCGA-LN-A9FR 2 CDS-5'UTR Inter-chr q22.1 Tumor suppressor gene Transcription factor q13.13 4868 ChimerSeq FusionScan TCGA_RNA-Seq SEC31A-SMAD1 SEC31A chr4 83778104 - SMAD1 chr4 146435589 + Exonic hg19 ESCA TCGA-LN-A9FR 2 CDS-5'UTR Intra-chr q21.22 q31.21 Transcription factor 4869 ChimerSeq FusionScan TCGA_RNA-Seq GALNT2-AATF GALNT2 chr1 230339036 + AATF chr17 35343915 + Exonic hg19 ESCA TCGA-LN-A9FR 2 Out-of-Frame Inter-chr q42.13 4870 ChimerSeq FusionScan TCGA_RNA-Seq CYP4F11-FAM95B1 CYP4F11 chr19 16038021 - FAM95B1 chr9 42470479 + Exonic hg19 ESCA TCGA-LN-A9FR 2 CDS-5'UTR Inter-chr p13.12 p11.2 4871 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC17-SERINC2 ZCCHC17 chr1 31821821 + SERINC2 chr1 31883231 + Exonic hg19 ESCA TCGA-L5-A4OP 3 In-Frame Intra-chr p35.2 p35.2 4872 ChimerSeq FusionScan TCGA_RNA-Seq DIS3L2-INPP5D DIS3L2 chr2 233103355 + INPP5D chr2 234054804 + Exonic hg19 ESCA TCGA-L5-A4OP 2 In-Frame Intra-chr q37.1 4873 ChimerSeq FusionScan TCGA_RNA-Seq CTTN-KIRREL3 CTTN chr11 70244720 + KIRREL3 chr11 126343361 - Exonic hg19 ESCA TCGA-IG-A3I8 35 5'UTR-CDS Intra-chr q13.3 q24.2 Seq+ 4874 ChimerSeq FusionScan TCGA_RNA-Seq ST3GAL4-C11orf70 ST3GAL4 chr11 126279306 + C11orf70 chr11 101929610 + Exonic hg19 ESCA TCGA-IG-A3I8 15 In-Frame Intra-chr q24.2 q22.1 Seq+ 4875 ChimerSeq FusionScan TCGA_RNA-Seq DCPS-CCND1 DCPS chr11 126176639 + CCND1 chr11 69462761 + Exonic hg19 ESCA TCGA-IG-A3I8 14 In-Frame Intra-chr q24.2 q13.3 Oncogene Seq+ 4876 ChimerSeq FusionScan TCGA_RNA-Seq ST3GAL4-C11orf70 ST3GAL4 chr11 126283543 + C11orf70 chr11 101929610 + Exonic hg19 ESCA TCGA-IG-A3I8 11 In-Frame Intra-chr q24.2 q22.1 Seq+ 4877 ChimerSeq FusionScan TCGA_RNA-Seq ST3GAL4-FGF19 ST3GAL4 chr11 126225737 + FGF19 chr11 69518132 - Exonic hg19 ESCA TCGA-IG-A3I8 10 5'UTR-CDS Intra-chr q24.2 q13.3 Seq+ 4878 ChimerSeq FusionScan TCGA_RNA-Seq SOCS6-CTDP1 SOCS6 chr18 67956326 + CTDP1 chr18 77455224 + Exonic hg19 ESCA TCGA-IG-A3I8 9 5'UTR-5'UTR Intra-chr q22.2 Seq+ 4879 ChimerSeq FusionScan TCGA_RNA-Seq ST3GAL4-FGF19 ST3GAL4 chr11 126225737 + FGF19 chr11 69514344 - Exonic hg19 ESCA TCGA-IG-A3I8 8 5'UTR-CDS Intra-chr q24.2 q13.3 Seq+ 4880 ChimerSeq FusionScan TCGA_RNA-Seq DCPS-YAP1 DCPS chr11 126176639 + YAP1 chr11 102033186 + Exonic hg19 ESCA TCGA-IG-A3I8 6 Out-of-Frame Intra-chr q24.2 q22.1 Tumor suppressor gene Seq+ 4881 ChimerSeq FusionScan TCGA_RNA-Seq ZNRF3-SLC5A1 ZNRF3 chr22 29280054 + SLC5A1 chr22 32445929 + Exonic hg19 ESCA TCGA-IG-A3I8 5 In-Frame Intra-chr q12.1 q12.3 Seq+ 4882 ChimerSeq FusionScan TCGA_RNA-Seq CCND1-YAP1 CCND1 chr11 69462910 + YAP1 chr11 102033186 + Exonic hg19 ESCA TCGA-IG-A3I8 3 Out-of-Frame Intra-chr q13.3 Oncogene q22.1 Tumor suppressor gene 4883 ChimerSeq FusionScan TCGA_RNA-Seq DCPS-CCND1 DCPS chr11 126176639 + CCND1 chr11 69457798 + Exonic hg19 ESCA TCGA-IG-A3I8 3 Out-of-Frame Intra-chr q24.2 q13.3 Oncogene Seq+ 4884 ChimerSeq FusionScan TCGA_RNA-Seq MSL2-DCUN1D5 MSL2 chr3 135913813 - DCUN1D5 chr11 102937296 - Exonic hg19 ESCA TCGA-IG-A3I8 2 Out-of-Frame Inter-chr q22.3 q22.3 4885 ChimerSeq FusionScan TCGA_RNA-Seq YAP1-CDON YAP1 chr11 101985125 + CDON chr11 125893432 - Exonic hg19 ESCA TCGA-IG-A3I8 2 CDS-5'UTR Intra-chr q22.1 Tumor suppressor gene q24.2 4886 ChimerSeq FusionScan TCGA_RNA-Seq CBFA2T2-GNAS CBFA2T2 chr20 32078107 + GNAS chr20 57470666 + Exonic hg19 ESCA TCGA-IG-A3I8 2 In-Frame Intra-chr q11.21 q13.32 Oncogene 4887 ChimerSeq FusionScan TCGA_RNA-Seq MAPKAPK5-ATXN2 MAPKAPK5 chr12 112280573 + ATXN2 chr12 111908546 - Exonic hg19 ESCA TCGA-IG-A3I8 2 Out-of-Frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 4888 ChimerSeq FusionScan TCGA_RNA-Seq CBFA2T2-GNAI3 CBFA2T2 chr20 32078107 + GNAI3 chr1 110116358 + Exonic hg19 ESCA TCGA-IG-A3I8 2 In-Frame Inter-chr q11.21 p13.3 4889 ChimerSeq FusionScan TCGA_RNA-Seq UBP1-TFCP2L1 UBP1 chr3 33453072 - TFCP2L1 chr2 122004546 - Exonic hg19 ESCA TCGA-IG-A3I8 2 In-Frame Inter-chr p22.3 Transcription factor q14.2 Transcription factor 4890 ChimerSeq FusionScan TCGA_RNA-Seq TBCD-CCDC57 TBCD chr17 80772810 + CCDC57 chr17 80059742 - Exonic hg19 ESCA TCGA-L5-A4OW 14 In-Frame Intra-chr q25.3 Seq+ 4891 ChimerSeq FusionScan TCGA_RNA-Seq STAT3-NOS2 STAT3 chr17 40540296 - NOS2 chr17 26116714 - Exonic hg19 ESCA TCGA-L5-A4OW 12 5'UTR-CDS Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q11.2 Seq+ 4892 ChimerSeq FusionScan TCGA_RNA-Seq PGS1-BPTF PGS1 chr17 76400170 + BPTF chr17 65916130 + Exonic hg19 ESCA TCGA-L5-A4OW 12 In-Frame Intra-chr q25.3 q24.2 Transcription factor Seq+ 4893 ChimerSeq FusionScan TCGA_RNA-Seq ETV4-TCAP ETV4 chr17 41610041 - TCAP chr17 37821968 + Exonic hg19 ESCA TCGA-L5-A4OW 6 Out-of-Frame Intra-chr q21.31 Oncogene Transcription factor q12 Seq+ 4894 ChimerSeq FusionScan TCGA_RNA-Seq CERS6-NOSTRIN CERS6 chr2 169404211 + NOSTRIN chr2 169707593 + Exonic hg19 ESCA TCGA-L5-A4OW 6 In-Frame Intra-chr q24.3 Seq+ 4895 ChimerSeq FusionScan TCGA_RNA-Seq SEPT9-BAIAP2 SEPT9 chr17 75303279 + BAIAP2 chr17 79089569 + Exonic hg19 ESCA TCGA-L5-A4OW 6 Out-of-Frame Intra-chr q25.3 Seq+ 4896 ChimerSeq FusionScan TCGA_RNA-Seq JUP-TTLL6 JUP chr17 39925220 - TTLL6 chr17 46865361 - Exonic hg19 ESCA TCGA-L5-A4OW 6 In-Frame Intra-chr q21.2 Tumor suppressor gene q21.32 Seq+ 4897 ChimerSeq FusionScan TCGA_RNA-Seq TTLL6-NOS2 TTLL6 chr17 46862284 - NOS2 chr17 26116714 - Exonic hg19 ESCA TCGA-L5-A4OW 5 Out-of-Frame Intra-chr q21.32 q11.2 Seq+ 4898 ChimerSeq FusionScan TCGA_RNA-Seq MBOAT1-TPMT MBOAT1 chr6 20212366 - TPMT chr6 18149402 - Exonic hg19 ESCA TCGA-L5-A4OW 5 CDS-5'UTR Intra-chr p22.3 p22.3 Seq+ 4899 ChimerSeq FusionScan TCGA_RNA-Seq FKBP10-FAM134C FKBP10 chr17 39973455 + FAM134C chr17 40739882 - Exonic hg19 ESCA TCGA-L5-A4OW 4 In-Frame Intra-chr q21.2 4900 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC24-ELP4 DNAJC24 chr11 31392406 + ELP4 chr11 31616316 + Exonic hg19 ESCA TCGA-L5-A4OW 3 In-Frame Intra-chr p13 p13 Seq+ 4901 ChimerSeq FusionScan TCGA_RNA-Seq TPMT-BTBD9 TPMT chr6 18149218 - BTBD9 chr6 38312869 - Exonic hg19 ESCA TCGA-L5-A4OW 3 In-Frame Intra-chr p22.3 p21.2 Seq+ 4902 ChimerSeq FusionScan TCGA_RNA-Seq KRIT1-CDK6 KRIT1 chr7 91871347 - CDK6 chr7 92247521 - Exonic hg19 ESCA TCGA-L5-A4OW 3 Out-of-Frame Intra-chr q21.2 Tumor suppressor gene q21.2 CMGC:CDK Oncogene Tumor suppressor gene Seq+ 4903 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHH1-ARG2 PLEKHH1 chr14 68000115 + ARG2 chr14 68087610 + Exonic hg19 ESCA TCGA-L5-A4OW 2 5'UTR-5'UTR Intra-chr q24.1 q24.1 4904 ChimerSeq FusionScan TCGA_RNA-Seq SEPT9-BAIAP2 SEPT9 chr17 75316430 + BAIAP2 chr17 79089569 + Exonic hg19 ESCA TCGA-L5-A4OW 2 Out-of-Frame Intra-chr q25.3 Seq+ 4905 ChimerSeq FusionScan TCGA_RNA-Seq CWC25-LPCAT1 CWC25 chr17 36962549 - LPCAT1 chr5 1489973 - Exonic hg19 ESCA TCGA-L5-A4OW 2 Out-of-Frame Inter-chr q12 Seq+ 4906 ChimerSeq FusionScan TCGA_RNA-Seq RPTOR-SPAG9 RPTOR chr17 78811797 + SPAG9 chr17 49084687 - Exonic hg19 ESCA TCGA-L5-A4OW 2 Out-of-Frame Intra-chr q25.3 q21.33 4907 ChimerSeq FusionScan TCGA_RNA-Seq ADAP1-SUN1 ADAP1 chr7 966188 - SUN1 chr7 908985 + Exonic hg19 ESCA TCGA-L5-A4OW 2 Out-of-Frame Intra-chr p22.3 p22.3 Seq+ 4908 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-ANXA13 PVT1 chr8 128806980 + ANXA13 chr8 124724993 - Exonic hg19 ESCA TCGA-JY-A6F8 27 5'UTR-CDS Intra-chr q24.21 q24.13 Seq+ 4909 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0247-SLC39A9 KIAA0247 chr14 70170309 + SLC39A9 chr14 69908785 + Exonic hg19 ESCA TCGA-JY-A6F8 12 In-Frame Intra-chr q24.1 Seq+ 4910 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-ANXA13 PVT1 chr8 128806980 + ANXA13 chr8 124714976 - Exonic hg19 ESCA TCGA-JY-A6F8 10 5'UTR-CDS Intra-chr q24.21 q24.13 Seq+ 4911 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0247-SLC39A9 KIAA0247 chr14 70125430 + SLC39A9 chr14 69908785 + Exonic hg19 ESCA TCGA-JY-A6F8 8 In-Frame Intra-chr q24.1 Seq+ 4912 ChimerSeq FusionScan TCGA_RNA-Seq FAF1-TESK2 FAF1 chr1 51121113 - TESK2 chr1 45821121 - Exonic hg19 ESCA TCGA-JY-A6F8 7 In-Frame Intra-chr p32.3 p34.1 TKL:LISK Seq+ 4913 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-PCAT1 PVT1 chr8 128806980 + PCAT1 chr8 128031888 + Exonic hg19 ESCA TCGA-JY-A6F8 3 5'UTR-5'UTR Intra-chr q24.21 q24.21 Seq+ 4914 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0247-SLC39A9 KIAA0247 chr14 70170309 + SLC39A9 chr14 69908548 + Exonic hg19 ESCA TCGA-JY-A6F8 3 CDS-5'UTR Intra-chr q24.1 Seq+ 4915 ChimerSeq FusionScan TCGA_RNA-Seq TYW1-C7orf42 TYW1 chr7 66483130 + C7orf42 chr7 66406834 + Exonic hg19 ESCA TCGA-JY-A6F8 3 CDS-5'UTR Intra-chr q11.21 Seq+ 4916 ChimerSeq FusionScan TCGA_RNA-Seq TMLHE-DERL1 TMLHE chrX 154842452 - DERL1 chr8 124042956 - Exonic hg19 ESCA TCGA-JY-A6F8 2 5'UTR-CDS Inter-chr q28 q24.13 4917 ChimerSeq FusionScan TCGA_RNA-Seq TMEM19-CD63 TMEM19 chr12 72083484 + CD63 chr12 56119680 - Exonic hg19 ESCA TCGA-JY-A6F8 2 Out-of-Frame Intra-chr q21.1 q13.2 4918 ChimerSeq FusionScan TCGA_RNA-Seq SRGAP2P2-OLFML2B SRGAP2P2 chr1 143916308 + OLFML2B chr1 161989972 - Exonic hg19 ESCA TCGA-JY-A6F8 2 5'UTR-CDS Intra-chr q23.3 4919 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-ICA1 RCC1 chr1 28834672 + ICA1 chr7 8183602 - Exonic hg19 ESCA TCGA-JY-A6F8 2 5'UTR-CDS Inter-chr p35.3 p21.3 Seq+ 4920 ChimerSeq FusionScan TCGA_RNA-Seq BICD2-IPPK BICD2 chr9 95477534 - IPPK chr9 95420963 - Exonic hg19 ESCA TCGA-JY-A6F8 2 In-Frame Intra-chr q22.31 q22.31 4921 ChimerSeq FusionScan TCGA_RNA-Seq MAGI3-RGS18 MAGI3 chr1 114092253 + RGS18 chr1 192150421 + Exonic hg19 ESCA TCGA-JY-A6F8 2 In-Frame Intra-chr p13.2 q31.2 4922 ChimerSeq FusionScan TCGA_RNA-Seq MYO1D-WAPAL MYO1D chr17 31065270 - WAPAL chr10 88233730 - Exonic hg19 ESCA TCGA-JY-A6F8 2 In-Frame Inter-chr q11.2 4923 ChimerSeq FusionScan TCGA_RNA-Seq NRP2-KLF7 NRP2 chr2 206631542 + KLF7 chr2 207953305 - Exonic hg19 ESCA TCGA-L5-A8NT 4 In-Frame Intra-chr q33.3 q33.3 Transcription factor Seq+ 4924 ChimerSeq FusionScan TCGA_RNA-Seq DENND1B-PRRC2C DENND1B chr1 197741997 - PRRC2C chr1 171481170 + Exonic hg19 ESCA TCGA-L5-A8NT 2 CDS-5'UTR Intra-chr q31.3 q24.3 4925 ChimerSeq FusionScan TCGA_RNA-Seq SEP15-IL4R 2019_ 9_ 15_ chr1 87368963 - IL4R chr16 27356189 + Exonic hg19 ESCA TCGA-L5-A8NT 2 Out-of-Frame Inter-chr p12.1 4926 ChimerSeq FusionScan TCGA_RNA-Seq MAP2-UNC80 MAP2 chr2 210289000 + UNC80 chr2 210843252 + Exonic hg19 ESCA TCGA-L5-A8NT 2 5'UTR-CDS Intra-chr q34 q34 4927 ChimerSeq FusionScan TCGA_RNA-Seq DAB2IP-DOCK8 DAB2IP chr9 124329507 + DOCK8 chr9 286460 + Exonic hg19 ESCA TCGA-L5-A8NT 2 Out-of-Frame Intra-chr q33.2 Tumor suppressor gene p24.3 4928 ChimerSeq FusionScan TCGA_RNA-Seq LRBA-PHF20L1 LRBA chr4 151231380 - PHF20L1 chr8 133806655 + Exonic hg19 ESCA TCGA-L5-A8NT 2 Out-of-Frame Inter-chr q31.3 q24.22 4929 ChimerSeq FusionScan TCGA_RNA-Seq TEFM-SMARCD2 TEFM chr17 29231083 - SMARCD2 chr17 61912927 - Exonic hg19 ESCA TCGA-L5-A8NT 2 In-Frame Intra-chr q11.2 q23.3 4930 ChimerSeq FusionScan TCGA_RNA-Seq EFCAB4B-KCNA6 EFCAB4B chr12 3822402 - KCNA6 chr12 4959903 + Exonic hg19 ESCA TCGA-L5-A8NT 2 5'UTR-3'UTR Intra-chr 4931 ChimerSeq FusionScan TCGA_RNA-Seq TLK1-C14orf101 TLK1 chr2 172016799 - C14orf101 chr14 57051718 + Exonic hg19 ESCA TCGA-L5-A8NT 2 In-Frame Inter-chr q31.1 Other:TLK 4932 ChimerSeq FusionScan TCGA_RNA-Seq TGIF1-IMPA2 TGIF1 chr18 3450503 + IMPA2 chr18 11999052 + Exonic hg19 ESCA TCGA-L5-A8NT 2 Out-of-Frame Intra-chr p11.31 Transcription factor p11.21 4933 ChimerSeq FusionScan TCGA_RNA-Seq STK24-PCCA STK24 chr13 99171496 - PCCA chr13 100959445 + Exonic hg19 ESCA TCGA-L5-A8NT 2 In-Frame Intra-chr q32.2 q32.3 4934 ChimerSeq FusionScan TCGA_RNA-Seq IFRD2-RBM5 IFRD2 chr3 50329647 - RBM5 chr3 50150815 + Exonic hg19 ESCA TCGA-L5-A8NT 2 Out-of-Frame Intra-chr p21.31 p21.31 Tumor suppressor gene 4935 ChimerSeq FusionScan TCGA_RNA-Seq CHD1-ST8SIA4 CHD1 chr5 98262037 - ST8SIA4 chr5 100192100 - Exonic hg19 ESCA TCGA-L5-A8NT 2 In-Frame Intra-chr q21.1 Tumor suppressor gene q21.1 Seq+ 4936 ChimerSeq FusionScan TCGA_RNA-Seq FUT10-SH2D4A FUT10 chr8 33310733 - SH2D4A chr8 19221582 + Exonic hg19 ESCA TCGA-LN-A49S 3 In-Frame Intra-chr p12 p21.3 4937 ChimerSeq FusionScan TCGA_RNA-Seq TIAM1-NARS2 TIAM1 chr21 32537278 - NARS2 chr11 78239982 - Exonic hg19 ESCA TCGA-LN-A49S 2 In-Frame Inter-chr q22.11 q14.1 4938 ChimerSeq FusionScan TCGA_RNA-Seq ZNF76-SLU7 ZNF76 chr6 35255622 + SLU7 chr5 159842317 - Exonic hg19 ESCA TCGA-LN-A49S 2 CDS-5'UTR Inter-chr p21.31 Transcription factor q33.3 4939 ChimerSeq FusionScan TCGA_RNA-Seq CTTN-SHANK2 CTTN chr11 70256066 + SHANK2 chr11 70349036 - Exonic hg19 ESCA TCGA-VR-AA4G 7 In-Frame Intra-chr q13.3 q13.4 Seq+ 4940 ChimerSeq FusionScan TCGA_RNA-Seq PTPRS-AGTRAP PTPRS chr19 5219320 - AGTRAP chr1 11807496 + Exonic hg19 ESCA TCGA-VR-AA4G 2 In-Frame Inter-chr p13.3 p36.22 4941 ChimerSeq FusionScan TCGA_RNA-Seq TSC22D1-ZNF415 TSC22D1 chr13 45147298 - ZNF415 chr19 53613161 - Exonic hg19 ESCA TCGA-VR-AA4G 2 Out-of-Frame Inter-chr q14.11 Tumor suppressor gene Transcription factor q13.42 Transcription factor 4942 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0753-RSBN1L KIAA0753 chr17 6493098 - RSBN1L chr7 77407654 + Exonic hg19 ESCA TCGA-VR-AA4G 2 In-Frame Inter-chr p13.1 q11.23 4943 ChimerSeq FusionScan TCGA_RNA-Seq RASSF8-ITPR2 RASSF8 chr12 26112081 + ITPR2 chr12 26648193 - Exonic hg19 ESCA TCGA-VR-AA4G 2 5'UTR-CDS Intra-chr p12.1 Tumor suppressor gene p11.23 4944 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2IP-SREK1 ERBB2IP chr5 65310553 + SREK1 chr5 65449290 + Exonic hg19 ESCA TCGA-VR-AA4G 2 In-Frame Intra-chr q12.3 Seq+ 4945 ChimerSeq FusionScan TCGA_RNA-Seq CPNE8-MGST1 CPNE8 chr12 39155913 - MGST1 chr12 16507164 + Exonic hg19 ESCA TCGA-2H-A9GH 7 CDS-5'UTR Intra-chr q12 p12.3 Seq+ 4946 ChimerSeq FusionScan TCGA_RNA-Seq NLRC5-FTO NLRC5 chr16 57080553 + FTO chr16 54145673 + Exonic hg19 ESCA TCGA-2H-A9GH 7 In-Frame Intra-chr q13 q12.2 Seq+ 4947 ChimerSeq FusionScan TCGA_RNA-Seq LEPR-MEF2D LEPR chr1 66070920 + MEF2D chr1 156438812 - Exonic hg19 ESCA TCGA-2H-A9GH 2 In-Frame Intra-chr p31.3 q22 Transcription factor Seq+ 4948 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-RSBN1L PTPN12 chr7 77256992 + RSBN1L chr7 77365726 + Exonic hg19 ESCA TCGA-2H-A9GH 2 In-Frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 4949 ChimerSeq FusionScan TCGA_RNA-Seq OSBPL10-LINC00578 OSBPL10 chr3 32022390 - LINC00578 chr3 177347204 + Exonic hg19 ESCA TCGA-2H-A9GH 2 CDS-5'UTR Intra-chr p22.3 q26.32 4950 ChimerSeq FusionScan TCGA_RNA-Seq EIF4ENIF1-SEC61B EIF4ENIF1 chr22 31854460 - SEC61B chr9 101992618 + Exonic hg19 ESCA TCGA-2H-A9GH 2 Out-of-Frame Inter-chr q12.2 q22.33 4951 ChimerSeq FusionScan TCGA_RNA-Seq NLRC5-FTO NLRC5 chr16 57079404 + FTO chr16 54145673 + Exonic hg19 ESCA TCGA-2H-A9GH 2 In-Frame Intra-chr q13 q12.2 Seq+ 4952 ChimerSeq FusionScan TCGA_RNA-Seq LGALS3-STK39 LGALS3 chr14 55596018 + STK39 chr2 168997268 - Exonic hg19 ESCA TCGA-2H-A9GH 2 5'UTR-CDS Inter-chr q22.3 q24.3 4953 ChimerSeq FusionScan TCGA_RNA-Seq UBE2J1-SET UBE2J1 chr6 90062257 - SET chr9 131453448 + Exonic hg19 ESCA TCGA-2H-A9GH 2 In-Frame Inter-chr q15 q34.11 4954 ChimerSeq FusionScan TCGA_RNA-Seq RPH3AL-NXN RPH3AL chr17 96901 - NXN chr17 729318 - Exonic hg19 ESCA TCGA-JY-A93C 2 Out-of-Frame Intra-chr p13.3 4955 ChimerSeq FusionScan TCGA_RNA-Seq SEC23B-CSRP2BP SEC23B chr20 18496380 + CSRP2BP chr20 18162353 + Exonic hg19 ESCA TCGA-L5-A4ON 9 In-Frame Intra-chr p11.23 Seq+ 4956 ChimerSeq FusionScan TCGA_RNA-Seq ITPK1-BTBD7 ITPK1 chr14 93542939 - BTBD7 chr14 93730339 - Exonic hg19 ESCA TCGA-L5-A4ON 7 Out-of-Frame Intra-chr Seq+ 4957 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 ESCA TCGA-L5-A4ON 3 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 4958 ChimerSeq FusionScan TCGA_RNA-Seq KRAS-ETNK1 KRAS chr12 25398207 - ETNK1 chr12 22796696 + Exonic hg19 ESCA TCGA-L5-A4ON 2 In-Frame Intra-chr p12.1 Oncogene p12.1 4959 ChimerSeq FusionScan TCGA_RNA-Seq ITPR2-KIAA0922 ITPR2 chr12 26774055 - KIAA0922 chr4 154501977 + Exonic hg19 ESCA TCGA-L5-A4ON 2 In-Frame Inter-chr p11.23 q31.3 4960 ChimerSeq FusionScan TCGA_RNA-Seq UPF1-FKBP1A UPF1 chr19 18976259 + FKBP1A chr20 1373525 - Exonic hg19 ESCA TCGA-L5-A4ON 2 In-Frame Inter-chr p13.11 p13 4961 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-MIEN1 GRB7 chr17 37898709 + MIEN1 chr17 37886544 - Exonic hg19 ESCA TCGA-2H-A9GF 74 In-Frame Intra-chr q12 q12 Seq+ 4962 ChimerSeq FusionScan TCGA_RNA-Seq STARD3-IKZF3 STARD3 chr17 37793484 + IKZF3 chr17 37988404 - Exonic hg19 ESCA TCGA-2H-A9GF 39 5'UTR-CDS Intra-chr q12 q21.1 Tumor suppressor gene Transcription factor Seq+ 4963 ChimerSeq FusionScan TCGA_RNA-Seq AGAP1-C1orf115 AGAP1 chr2 236877267 + C1orf115 chr1 220869953 + Exonic hg19 ESCA TCGA-2H-A9GF 14 Out-of-Frame Inter-chr q37.2 q41 Seq+ 4964 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-PGAP3 ERBB2 chr17 37856564 + PGAP3 chr17 37830932 - Exonic hg19 ESCA TCGA-2H-A9GF 6 Out-of-Frame Intra-chr q12 Oncogene q12 Oncogene Seq+ 4965 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-PGAP3 ERBB2 chr17 37856564 + PGAP3 chr17 37842272 - Exonic hg19 ESCA TCGA-2H-A9GF 6 In-Frame Intra-chr q12 Oncogene q12 Oncogene Seq+ 4966 ChimerSeq FusionScan TCGA_RNA-Seq TFDP2-XRN1 TFDP2 chr3 141820576 - XRN1 chr3 142084208 - Exonic hg19 ESCA TCGA-2H-A9GF 4 In-Frame Intra-chr q23 Transcription factor q23 Seq+ 4967 ChimerSeq FusionScan TCGA_RNA-Seq STARD3-IKZF3 STARD3 chr17 37793484 + IKZF3 chr17 37985741 - Exonic hg19 ESCA TCGA-2H-A9GF 2 5'UTR-CDS Intra-chr q12 q21.1 Tumor suppressor gene Transcription factor Seq+ 4968 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R1B-IKZF3 PPP1R1B chr17 37791979 + IKZF3 chr17 37988404 - Exonic hg19 ESCA TCGA-2H-A9GF 2 In-Frame Intra-chr q12 Tumor suppressor gene q21.1 Tumor suppressor gene Transcription factor 4969 ChimerSeq FusionScan TCGA_RNA-Seq PI4KA-SNAP29 PI4KA chr22 21212857 - SNAP29 chr22 21224624 + Exonic hg19 ESCA TCGA-LN-A4A2 7 In-Frame Intra-chr q11.21 q11.21 Seq+ 4970 ChimerSeq FusionScan TCGA_RNA-Seq VPS13B-RAD54B VPS13B chr8 100205285 + RAD54B chr8 95423543 - Exonic hg19 ESCA TCGA-LN-A4A2 2 In-Frame Intra-chr q22.2 q22.1 4971 ChimerSeq FusionScan TCGA_RNA-Seq FAM49B-PVT1 FAM49B chr8 130915557 - PVT1 chr8 129108763 + Exonic hg19 ESCA TCGA-LN-A4A2 2 5'UTR-5'UTR Intra-chr q24.21 q24.21 4972 ChimerSeq FusionScan TCGA_RNA-Seq LPP-CLDN1 LPP chr3 188124101 + CLDN1 chr3 190030825 - Exonic hg19 ESCA TCGA-LN-A4A2 2 In-Frame Intra-chr q27.3 Oncogene q28 Tumor suppressor gene Seq+ 4973 ChimerSeq FusionScan TCGA_RNA-Seq WDR47-GNAI3 WDR47 chr1 109584483 - GNAI3 chr1 110134664 + Exonic hg19 ESCA TCGA-LN-A4A2 2 5'UTR-CDS Intra-chr p13.3 p13.3 4974 ChimerSeq FusionScan TCGA_RNA-Seq NAV3-RPL35 NAV3 chr12 78415642 + RPL35 chr9 127623834 - Exonic hg19 ESCA TCGA-LN-A4A2 2 Out-of-Frame Inter-chr q21.2 q33.3 4975 ChimerSeq FusionScan TCGA_RNA-Seq MIR205HG-ATF7IP MIR205HG chr1 209602753 + ATF7IP chr12 14576842 + Exonic hg19 ESCA TCGA-LN-A4A2 2 CDS-5'UTR Inter-chr q32.2 p13.1 4976 ChimerSeq FusionScan TCGA_RNA-Seq ITGAV-ZC3H7A ITGAV chr2 187506315 + ZC3H7A chr16 11852395 - Exonic hg19 ESCA TCGA-LN-A4A2 2 Out-of-Frame Inter-chr q32.1 Tumor suppressor gene p13.13 4977 ChimerSeq FusionScan TCGA_RNA-Seq SRI-DERL2 SRI chr7 87840196 - DERL2 chr17 5383902 - Exonic hg19 ESCA TCGA-LN-A4A2 2 In-Frame Inter-chr q21.12 p13.2 4978 ChimerSeq FusionScan TCGA_RNA-Seq NUP62-GNAS NUP62 chr19 50432582 - GNAS chr20 57484216 + Exonic hg19 ESCA TCGA-LN-A4A2 2 5'UTR-5'UTR Inter-chr q13.33 q13.32 Oncogene 4979 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC11-STAT5B ZCCHC11 chr1 52902426 - STAT5B chr17 40369482 - Exonic hg19 ESCA TCGA-JY-A6FG 2 Out-of-Frame Inter-chr p32.3 q21.2 Transcription factor 4980 ChimerSeq FusionScan TCGA_RNA-Seq C11orf80-UBAP2L C11orf80 chr11 66526567 + UBAP2L chr1 154231452 + Exonic hg19 ESCA TCGA-JY-A6FG 2 Out-of-Frame Inter-chr q13.2 q21.3 4981 ChimerSeq FusionScan TCGA_RNA-Seq NUP155-MARCH6 NUP155 chr5 37364348 - 2019_ 3_ 6_ chr5 10402495 + Exonic hg19 ESCA TCGA-L5-A43E 2 Out-of-Frame Intra-chr p13.2 p15.2 4982 ChimerSeq FusionScan TCGA_RNA-Seq GLRX3-SGMS1 GLRX3 chr10 131934776 + SGMS1 chr10 52279681 - Exonic hg19 ESCA TCGA-L5-A43E 2 CDS-5'UTR Intra-chr q26.3 q11.23 Tumor suppressor gene Seq+ 4983 ChimerSeq FusionScan TCGA_RNA-Seq BAIAP2L1-ACAP2 BAIAP2L1 chr7 97935750 - ACAP2 chr3 195009960 - Exonic hg19 ESCA TCGA-L5-A43E 2 In-Frame Inter-chr q22.1 q29 4984 ChimerSeq FusionScan TCGA_RNA-Seq OAZ1-FAM83H OAZ1 chr19 2269743 + FAM83H chr8 144812767 - Exonic hg19 ESCA TCGA-L5-A43E 2 CDS-5'UTR Inter-chr p13.3 4985 ChimerSeq FusionScan TCGA_RNA-Seq YY1AP1-CCDC53 YY1AP1 chr1 155638417 - CCDC53 chr12 102406970 - Exonic hg19 ESCA TCGA-L5-A43E 2 Out-of-Frame Inter-chr q22 4986 ChimerSeq FusionScan TCGA_RNA-Seq BRD9-STARD3 BRD9 chr5 876215 - STARD3 chr17 37813260 + Exonic hg19 ESCA TCGA-R6-A8W5 46 In-Frame Inter-chr p15.33 q12 Seq+ 4987 ChimerSeq FusionScan TCGA_RNA-Seq AGRN-ZC3H18 AGRN chr1 980903 + ZC3H18 chr16 88664585 + Exonic hg19 ESCA TCGA-R6-A8W5 21 In-Frame Inter-chr p36.33 q24.2 Seq+ 4988 ChimerSeq FusionScan TCGA_RNA-Seq WDR59-KARS WDR59 chr16 74982416 - KARS chr16 75670445 - Exonic hg19 ESCA TCGA-R6-A8W5 21 In-Frame Intra-chr q23.1 q23.1 Seq+ 4989 ChimerSeq FusionScan TCGA_RNA-Seq OSBP-GIF OSBP chr11 59361076 - GIF chr11 59597018 - Exonic hg19 ESCA TCGA-R6-A8W5 16 In-Frame Intra-chr q12.1 q12.1 Seq+ 4990 ChimerSeq FusionScan TCGA_RNA-Seq ETV4-LSM12 ETV4 chr17 41610041 - LSM12 chr17 42141302 - Exonic hg19 ESCA TCGA-R6-A8W5 12 In-Frame Intra-chr q21.31 Oncogene Transcription factor q21.31 Seq+ 4991 ChimerSeq FusionScan TCGA_RNA-Seq XPO5-VARS XPO5 chr6 43492844 - VARS chr6 31747591 - Exonic hg19 ESCA TCGA-R6-A8W5 11 CDS-5'UTR Intra-chr p21.1 Tumor suppressor gene Seq+ 4992 ChimerSeq FusionScan TCGA_RNA-Seq SNAPIN-FMNL1 SNAPIN chr1 153632042 + FMNL1 chr17 43317842 + Exonic hg19 ESCA TCGA-R6-A8W5 11 In-Frame Inter-chr q21.3 q21.31 Seq+ 4993 ChimerSeq FusionScan TCGA_RNA-Seq KIF13B-C20orf194 KIF13B chr8 29013242 - C20orf194 chr20 3262412 - Exonic hg19 ESCA TCGA-R6-A8W5 10 In-Frame Inter-chr p12 p13 Seq+ 4994 ChimerSeq FusionScan TCGA_RNA-Seq EIF2C2-TRAPPC9 EIF2C2 chr8 141582910 - TRAPPC9 chr8 141381279 - Exonic hg19 ESCA TCGA-R6-A8W5 7 In-Frame Intra-chr q24.3 4995 ChimerSeq FusionScan TCGA_RNA-Seq BRD9-TERT BRD9 chr5 891269 - TERT chr5 1282739 - Exonic hg19 ESCA TCGA-R6-A8W5 7 In-Frame Intra-chr p15.33 p15.33 Oncogene Seq+ 4996 ChimerSeq FusionScan TCGA_RNA-Seq UVRAG-SLCO2B1 UVRAG chr11 75563045 + SLCO2B1 chr11 74873699 + Exonic hg19 ESCA TCGA-R6-A8W5 5 In-Frame Intra-chr q13.5 Tumor suppressor gene q13.4 Seq+ 4997 ChimerSeq FusionScan TCGA_RNA-Seq PILRB-ZKSCAN1 PILRB chr7 99935887 + ZKSCAN1 chr7 99627871 + Exonic hg19 ESCA TCGA-R6-A8W5 4 5'UTR-CDS Intra-chr q22.1 q22.1 Transcription factor 4998 ChimerSeq FusionScan TCGA_RNA-Seq STIM1-PGAP2 STIM1 chr11 3877639 + PGAP2 chr11 3829523 + Exonic hg19 ESCA TCGA-R6-A8W5 3 In-Frame Intra-chr p15.4 p15.4 Seq+ 4999 ChimerSeq FusionScan TCGA_RNA-Seq TM9SF4-TTLL9 TM9SF4 chr20 30697558 + TTLL9 chr20 30474998 + Exonic hg19 ESCA TCGA-R6-A8W5 3 In-Frame Intra-chr q11.21 q11.21 Seq+ 5000 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-PGAP3 GRB7 chr17 37902455 + PGAP3 chr17 37830932 - Exonic hg19 ESCA TCGA-R6-A8W5 3 In-Frame Intra-chr q12 q12 Oncogene Seq+ 5001 ChimerSeq FusionScan TCGA_RNA-Seq BRD9-TERT BRD9 chr5 889701 - TERT chr5 1282739 - Exonic hg19 ESCA TCGA-R6-A8W5 3 In-Frame Intra-chr p15.33 p15.33 Oncogene Seq+ 5002 ChimerSeq FusionScan TCGA_RNA-Seq PSME4-ACYP2 PSME4 chr2 54197679 - ACYP2 chr2 54531824 + Exonic hg19 ESCA TCGA-R6-A8W5 3 In-Frame Intra-chr p16.2 p16.2 Seq+ 5003 ChimerSeq FusionScan TCGA_RNA-Seq BRD9-STARD3 BRD9 chr5 876215 - STARD3 chr17 37814027 + Exonic hg19 ESCA TCGA-R6-A8W5 3 In-Frame Inter-chr p15.33 q12 Seq+ 5004 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD28-COLQ ANKRD28 chr3 15900883 - COLQ chr3 15531144 - Exonic hg19 ESCA TCGA-R6-A8W5 3 Out-of-Frame Intra-chr p25.1 p25.1 Seq+ 5005 ChimerSeq FusionScan TCGA_RNA-Seq SPOP-TSPEAR SPOP chr17 47755294 - TSPEAR chr21 45953806 - Exonic hg19 ESCA TCGA-R6-A8W5 3 5'UTR-CDS Inter-chr q21.33 Oncogene Tumor suppressor gene q22.3 Seq+ 5006 ChimerSeq FusionScan TCGA_RNA-Seq ATAD5-NF1 ATAD5 chr17 29159431 + NF1 chr17 29483000 + Exonic hg19 ESCA TCGA-R6-A8W5 3 In-Frame Intra-chr q11.2 q11.2 Oncogene Tumor suppressor gene Seq+ 5007 ChimerSeq FusionScan TCGA_RNA-Seq RGNEF-BTF3 RGNEF chr5 72980709 + BTF3 chr5 72798312 + Exonic hg19 ESCA TCGA-R6-A8W5 3 In-Frame Intra-chr q13.2 5008 ChimerSeq FusionScan TCGA_RNA-Seq PUM1-PPP1R1B PUM1 chr1 31425080 - PPP1R1B chr17 37785422 + Exonic hg19 ESCA TCGA-R6-A8W5 2 In-Frame Inter-chr p35.2 q12 Tumor suppressor gene 5009 ChimerSeq FusionScan TCGA_RNA-Seq CDH3-PQLC2 CDH3 chr16 68679653 + PQLC2 chr1 19653024 + Exonic hg19 ESCA TCGA-R6-A8W5 2 Out-of-Frame Inter-chr q22.1 p36.13 5010 ChimerSeq FusionScan TCGA_RNA-Seq RCOR1-ISCA2 RCOR1 chr14 103059662 + ISCA2 chr14 74960752 + Exonic hg19 ESCA TCGA-R6-A8W5 2 Out-of-Frame Intra-chr q32.31 q24.3 Seq+ 5011 ChimerSeq FusionScan TCGA_RNA-Seq SLC33A1-PLCH1 SLC33A1 chr3 155571011 - PLCH1 chr3 155314167 - Exonic hg19 ESCA TCGA-R6-A8W5 2 In-Frame Intra-chr q25.31 q25.31 5012 ChimerSeq FusionScan TCGA_RNA-Seq KDM6A-NUP210 KDM6A chrX 44733233 + NUP210 chr3 13441361 - Exonic hg19 ESCA TCGA-R6-A8W5 2 Out-of-Frame Inter-chr p11.3 Oncogene Tumor suppressor gene p25.1 5013 ChimerSeq FusionScan TCGA_RNA-Seq S100A13-MAP3K14 S100A13 chr1 153603486 - MAP3K14 chr17 43347930 - Exonic hg19 ESCA TCGA-R6-A8W5 2 5'UTR-CDS Inter-chr q21.3 q21.31 5014 ChimerSeq FusionScan TCGA_RNA-Seq DVL3-RFX6 DVL3 chr3 183873584 + RFX6 chr6 117252493 + Exonic hg19 ESCA TCGA-R6-A8W5 2 Out-of-Frame Inter-chr q27.1 q22.1 Transcription factor Seq+ 5015 ChimerSeq FusionScan TCGA_RNA-Seq EPN3-AGPAT3 EPN3 chr17 48616676 + AGPAT3 chr21 45379514 + Exonic hg19 ESCA TCGA-R6-A8W5 2 CDS-5'UTR Inter-chr q21.33 q22.3 Seq+ 5016 ChimerSeq FusionScan TCGA_RNA-Seq SLC7A7-ACIN1 SLC7A7 chr14 23282108 - ACIN1 chr14 23533697 - Exonic hg19 ESCA TCGA-R6-A8W5 2 In-Frame Intra-chr q11.2 q11.2 Seq+ 5017 ChimerSeq FusionScan TCGA_RNA-Seq KDM6A-FANCD2 KDM6A chrX 44733233 + FANCD2 chr3 10105475 + Exonic hg19 ESCA TCGA-R6-A8W5 2 In-Frame Inter-chr p11.3 Oncogene Tumor suppressor gene p25.3 Oncogene 5018 ChimerSeq FusionScan TCGA_RNA-Seq NFIX-RNASEH2A NFIX chr19 13136366 + RNASEH2A chr19 12917821 + Exonic hg19 ESCA TCGA-R6-A8W5 2 In-Frame Intra-chr p13.13 Transcription factor p13.13 5019 ChimerSeq FusionScan TCGA_RNA-Seq CD44-PDHX CD44 chr11 35211612 + PDHX chr11 34952950 + Exonic hg19 ESCA TCGA-R6-A8W5 2 In-Frame Intra-chr p13 Oncogene Tumor suppressor gene p13 Seq+ 5020 ChimerSeq FusionScan TCGA_RNA-Seq AGRN-ZC3H18 AGRN chr1 970704 + ZC3H18 chr16 88664585 + Exonic hg19 ESCA TCGA-R6-A8W5 2 In-Frame Inter-chr p36.33 q24.2 Seq+ 5021 ChimerSeq FusionScan TCGA_RNA-Seq TMEM231-CHST6 TMEM231 chr16 75579249 - CHST6 chr16 75515789 - Exonic hg19 ESCA TCGA-L5-A4OI 2 CDS-5'UTR Intra-chr q23.1 q23.1 5022 ChimerSeq FusionScan TCGA_RNA-Seq TMBIM1-ABCB10 TMBIM1 chr2 219157188 - ABCB10 chr1 229685181 - Exonic hg19 ESCA TCGA-L5-A4OI 2 5'UTR-CDS Inter-chr q35 q42.13 5023 ChimerSeq FusionScan TCGA_RNA-Seq ZDHHC5-ASPSCR1 ZDHHC5 chr11 57435659 + ASPSCR1 chr17 79966912 + Exonic hg19 ESCA TCGA-L5-A4OI 2 5'UTR-5'UTR Inter-chr q12.1 q25.3 5024 ChimerSeq FusionScan TCGA_RNA-Seq SRGAP2P2-FAM91A2 SRGAP2P2 chr1 143916308 + FAM91A2 chr1 149670205 + Exonic hg19 ESCA TCGA-ZR-A9CJ 3 5'UTR-5'UTR Intra-chr 5025 ChimerSeq FusionScan TCGA_RNA-Seq GAPVD1-RABEPK GAPVD1 chr9 128024238 + RABEPK chr9 127990188 + Exonic hg19 ESCA TCGA-ZR-A9CJ 2 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 5026 ChimerSeq FusionScan TCGA_RNA-Seq CTCF-RPL27 CTCF chr16 67605167 + RPL27 chr17 41150765 + Exonic hg19 ESCA TCGA-ZR-A9CJ 2 5'UTR-5'UTR Inter-chr q22.1 Tumor suppressor gene Transcription factor q21.31 5027 ChimerSeq FusionScan TCGA_RNA-Seq TDRD5-RABGAP1L TDRD5 chr1 179563002 + RABGAP1L chr1 174652659 + Exonic hg19 ESCA TCGA-ZR-A9CJ 2 Out-of-Frame Intra-chr q25.2 q25.1 5028 ChimerSeq FusionScan TCGA_RNA-Seq TOP1-PHF20 TOP1 chr20 39729993 + PHF20 chr20 34501170 + Exonic hg19 ESCA TCGA-ZR-A9CJ 2 Out-of-Frame Intra-chr q12 Oncogene q11.22 Transcription factor 5029 ChimerSeq FusionScan TCGA_RNA-Seq CERS4-HUWE1 CERS4 chr19 8321594 + HUWE1 chrX 53564657 - Exonic hg19 ESCA TCGA-ZR-A9CJ 2 Out-of-Frame Inter-chr p13.2 p11.22 5030 ChimerSeq FusionScan TCGA_RNA-Seq MIR31HG-STARD3NL MIR31HG chr9 21559487 - STARD3NL chr7 38247047 + Exonic hg19 ESCA TCGA-ZR-A9CJ 2 3'UTR-5'UTR Inter-chr p21.3 p14.1 5031 ChimerSeq FusionScan TCGA_RNA-Seq SUGT1-DUSP16 SUGT1 chr13 53254290 + DUSP16 chr12 12674397 - Exonic hg19 ESCA TCGA-ZR-A9CJ 2 CDS-5'UTR Inter-chr q14.3 5032 ChimerSeq FusionScan TCGA_RNA-Seq TNS3-GARS TNS3 chr7 47546504 - GARS chr7 30649200 + Exonic hg19 ESCA TCGA-ZR-A9CJ 2 5'UTR-CDS Intra-chr p12.3 p14.3 5033 ChimerSeq FusionScan TCGA_RNA-Seq HIVEP3-NRCAM HIVEP3 chr1 42094419 - NRCAM chr7 107800937 - Exonic hg19 ESCA TCGA-ZR-A9CJ 2 5'UTR-CDS Inter-chr p34.2 Tumor suppressor gene Transcription factor q31.1 Tumor suppressor gene 5034 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC24-IMMP1L DNAJC24 chr11 31392406 + IMMP1L chr11 31455117 - Exonic hg19 ESCA TCGA-ZR-A9CJ 2 In-Frame Intra-chr p13 p13 Seq+ 5035 ChimerSeq FusionScan TCGA_RNA-Seq SKAP2-C1GALT1 SKAP2 chr7 26883648 - C1GALT1 chr7 7273933 + Exonic hg19 ESCA TCGA-ZR-A9CJ 2 CDS-5'UTR Intra-chr p15.2 p22.1 5036 ChimerSeq FusionScan TCGA_RNA-Seq FTX-WASF2 FTX chrX 73494176 - WASF2 chr1 27755443 - Exonic hg19 ESCA TCGA-ZR-A9CJ 2 3'UTR-5'UTR Inter-chr q13.2 p36.11 5037 ChimerSeq FusionScan TCGA_RNA-Seq RPS3-NETO2 RPS3 chr11 75111868 + NETO2 chr16 47117712 - Exonic hg19 ESCA TCGA-ZR-A9CJ 2 Out-of-Frame Inter-chr q13.4 q12.1 5038 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF18-ATL1 ARHGEF18 chr19 7460133 + ATL1 chr14 51054548 + Exonic hg19 ESCA TCGA-ZR-A9CJ 2 5'UTR-CDS Inter-chr p13.2 q22.1 5039 ChimerSeq FusionScan TCGA_RNA-Seq VCL-ADK VCL chr10 75867112 + ADK chr10 76360136 + Exonic hg19 ESCA TCGA-IC-A6RF 3 In-Frame Intra-chr q22.2 q22.2 Seq+ 5040 ChimerSeq FusionScan TCGA_RNA-Seq YWHAE-MYO1C YWHAE chr17 1303340 - MYO1C chr17 1387597 - Exonic hg19 ESCA TCGA-IC-A6RF 2 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 5041 ChimerSeq FusionScan TCGA_RNA-Seq STRN-USP25 STRN chr2 37193372 - USP25 chr21 17236586 + Exonic hg19 ESCA TCGA-IC-A6RF 2 In-Frame Inter-chr p22.2 q21.1 5042 ChimerSeq FusionScan TCGA_RNA-Seq WASF2-IFI6 WASF2 chr1 27816496 - IFI6 chr1 27995857 - Exonic hg19 ESCA TCGA-VR-A8EX 5 5'UTR-5'UTR Intra-chr p36.11 p35.3 Seq+ 5043 ChimerSeq FusionScan TCGA_RNA-Seq COX6C-VPS13B COX6C chr8 100905866 - VPS13B chr8 100883675 + Exonic hg19 ESCA TCGA-VR-A8EX 4 5'UTR-CDS Intra-chr q22.2 q22.2 Seq+ 5044 ChimerSeq FusionScan TCGA_RNA-Seq TRA2A-FAM174A TRA2A chr7 23571407 - FAM174A chr5 99921884 + Exonic hg19 ESCA TCGA-VR-A8EX 2 Out-of-Frame Inter-chr p15.3 q21.1 5045 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D22A-TRMU TBC1D22A chr22 47393605 + TRMU chr22 46752738 + Exonic hg19 ESCA TCGA-VR-A8EX 2 Out-of-Frame Intra-chr q13.31 q13.31 Seq+ 5046 ChimerSeq FusionScan TCGA_RNA-Seq MAP3K7-KIAA1009 MAP3K7 chr6 91296482 - KIAA1009 chr6 84872989 - Exonic hg19 ESCA TCGA-VR-A8EX 2 In-Frame Intra-chr q15 STE:STE11 Oncogene 5047 ChimerSeq FusionScan TCGA_RNA-Seq MAP1S-CEACAM6 MAP1S chr19 17835017 + CEACAM6 chr19 42270090 + Exonic hg19 ESCA TCGA-L5-A891 77 Out-of-Frame Intra-chr p13.11 q13.2 Seq+ 5048 ChimerSeq FusionScan TCGA_RNA-Seq MAP1S-CEACAM6 MAP1S chr19 17831846 + CEACAM6 chr19 42270090 + Exonic hg19 ESCA TCGA-L5-A891 52 In-Frame Intra-chr p13.11 q13.2 Seq+ 5049 ChimerSeq FusionScan TCGA_RNA-Seq ARID3A-PRPF31 ARID3A chr19 932742 + PRPF31 chr19 54634737 + Exonic hg19 ESCA TCGA-L5-A891 33 In-Frame Intra-chr p13.3 Transcription factor Seq+ 5050 ChimerSeq FusionScan TCGA_RNA-Seq B9D2-REEP6 B9D2 chr19 41869336 - REEP6 chr19 1495292 + Exonic hg19 ESCA TCGA-L5-A891 31 In-Frame Intra-chr q13.2 p13.3 Seq+ 5051 ChimerSeq FusionScan TCGA_RNA-Seq MAP1S-CEACAM6 MAP1S chr19 17835017 + CEACAM6 chr19 42274706 + Exonic hg19 ESCA TCGA-L5-A891 20 CDS-3'UTR Intra-chr p13.11 q13.2 Seq+ 5052 ChimerSeq FusionScan TCGA_RNA-Seq FBXO46-ZNF90 FBXO46 chr19 46234106 - ZNF90 chr19 20216029 + Exonic hg19 ESCA TCGA-L5-A891 18 5'UTR-CDS Intra-chr q13.32 p12 Transcription factor Seq+ 5053 ChimerSeq FusionScan TCGA_RNA-Seq DAZAP1-ZNF226 DAZAP1 chr19 1422395 + ZNF226 chr19 44679136 + Exonic hg19 ESCA TCGA-L5-A891 15 In-Frame Intra-chr p13.3 q13.31 Transcription factor Seq+ 5054 ChimerSeq FusionScan TCGA_RNA-Seq OLA1-GPR155 OLA1 chr2 175087760 - GPR155 chr2 175326400 - Exonic hg19 ESCA TCGA-L5-A891 9 In-Frame Intra-chr q31.1 q31.1 Seq+ 5055 ChimerSeq FusionScan TCGA_RNA-Seq GATAD2A-ZNF350 GATAD2A chr19 19496947 + ZNF350 chr19 52477784 - Exonic hg19 ESCA TCGA-L5-A891 9 5'UTR-5'UTR Intra-chr p13.11 Transcription factor q13.41 Transcription factor Seq+ 5056 ChimerSeq FusionScan TCGA_RNA-Seq ZNF542-ANGPTL6 ZNF542 chr19 56880305 + ANGPTL6 chr19 10205614 - Exonic hg19 ESCA TCGA-L5-A891 9 5'UTR-CDS Intra-chr p13.2 Seq+ 5057 ChimerSeq FusionScan TCGA_RNA-Seq GIPR-RBM42 GIPR chr19 46173992 + RBM42 chr19 36128059 + Exonic hg19 ESCA TCGA-L5-A891 9 In-Frame Intra-chr q13.32 q13.12 Seq+ 5058 ChimerSeq FusionScan TCGA_RNA-Seq ZNF295-TFF1 ZNF295 chr21 43430360 - TFF1 chr21 43783516 - Exonic hg19 ESCA TCGA-L5-A891 8 5'UTR-CDS Intra-chr q22.3 Seq+ 5059 ChimerSeq FusionScan TCGA_RNA-Seq PRKD2-KLHL26 PRKD2 chr19 47204055 - KLHL26 chr19 18778473 + Exonic hg19 ESCA TCGA-L5-A891 8 In-Frame Intra-chr q13.32 p13.11 Seq+ 5060 ChimerSeq FusionScan TCGA_RNA-Seq CARM1-PLA2G4C CARM1 chr19 10982598 + PLA2G4C chr19 48558306 - Exonic hg19 ESCA TCGA-L5-A891 7 Out-of-Frame Intra-chr p13.2 q13.33 Seq+ 5061 ChimerSeq FusionScan TCGA_RNA-Seq ASXL1-TPX2 ASXL1 chr20 30956926 + TPX2 chr20 30359362 + Exonic hg19 ESCA TCGA-L5-A891 6 Out-of-Frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 5062 ChimerSeq FusionScan TCGA_RNA-Seq ZNF295-TFF1 ZNF295 chr21 43423005 - TFF1 chr21 43783516 - Exonic hg19 ESCA TCGA-L5-A891 5 5'UTR-CDS Intra-chr q22.3 Seq+ 5063 ChimerSeq FusionScan TCGA_RNA-Seq SNX8-MAD1L1 SNX8 chr7 2353962 - MAD1L1 chr7 2054277 - Exonic hg19 ESCA TCGA-L5-A891 5 Out-of-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 5064 ChimerSeq FusionScan TCGA_RNA-Seq PIP5K1B-PGM5 PIP5K1B chr9 71491710 + PGM5 chr9 71094333 + Exonic hg19 ESCA TCGA-L5-A891 5 Out-of-Frame Intra-chr q21.11 q21.11 Seq+ 5065 ChimerSeq FusionScan TCGA_RNA-Seq ELL-MKNK2 ELL chr19 18569014 - MKNK2 chr19 2046690 - Exonic hg19 ESCA TCGA-L5-A891 5 Out-of-Frame Intra-chr p13.11 p13.3 Seq+ 5066 ChimerSeq FusionScan TCGA_RNA-Seq MAP1S-CEACAM6 MAP1S chr19 17831846 + CEACAM6 chr19 42274706 + Exonic hg19 ESCA TCGA-L5-A891 5 CDS-3'UTR Intra-chr p13.11 q13.2 Seq+ 5067 ChimerSeq FusionScan TCGA_RNA-Seq KLF9-FOXRED2 KLF9 chr9 73027774 - FOXRED2 chr22 36889850 - Exonic hg19 ESCA TCGA-L5-A891 4 5'UTR-CDS Inter-chr q21.12 Transcription factor q12.3 Seq+ 5068 ChimerSeq FusionScan TCGA_RNA-Seq ATAD3A-CPSF3L ATAD3A chr1 1447853 + CPSF3L chr1 1250998 - Exonic hg19 ESCA TCGA-L5-A891 4 Out-of-Frame Intra-chr p36.33 5069 ChimerSeq FusionScan TCGA_RNA-Seq ATAD3B-CPSF3L ATAD3B chr1 1407469 + CPSF3L chr1 1250998 - Exonic hg19 ESCA TCGA-L5-A891 4 Out-of-Frame Intra-chr p36.33 5070 ChimerSeq FusionScan TCGA_RNA-Seq WASF2-FGR WASF2 chr1 27816496 - FGR chr1 27951662 - Exonic hg19 ESCA TCGA-L5-A891 4 5'UTR-5'UTR Intra-chr p36.11 p35.3 TK:Src Seq+ 5071 ChimerSeq FusionScan TCGA_RNA-Seq R3HDM4-JAK3 R3HDM4 chr19 913086 - JAK3 chr19 17953981 - Exonic hg19 ESCA TCGA-L5-A891 3 Out-of-Frame Intra-chr p13.3 p13.11 TK:JakA Oncogene Seq+ 5072 ChimerSeq FusionScan TCGA_RNA-Seq PXN-PLA2G1B PXN chr12 120703419 - PLA2G1B chr12 120763823 - Exonic hg19 ESCA TCGA-L5-A891 3 In-Frame Intra-chr q24.23 q24.31 Seq+ 5073 ChimerSeq FusionScan TCGA_RNA-Seq EVI5L-PTPRS EVI5L chr19 7915008 + PTPRS chr19 5225855 - Exonic hg19 ESCA TCGA-L5-A891 3 In-Frame Intra-chr p13.2 p13.3 Seq+ 5074 ChimerSeq FusionScan TCGA_RNA-Seq PTPRS-MBD3 PTPRS chr19 5211600 - MBD3 chr19 1582711 - Exonic hg19 ESCA TCGA-L5-A891 3 Out-of-Frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 5075 ChimerSeq FusionScan TCGA_RNA-Seq CARM1-PLA2G4C CARM1 chr19 10982598 + PLA2G4C chr19 48551645 - Exonic hg19 ESCA TCGA-L5-A891 3 Out-of-Frame Intra-chr p13.2 q13.33 Seq+ 5076 ChimerSeq FusionScan TCGA_RNA-Seq OLA1-GPR155 OLA1 chr2 175087760 - GPR155 chr2 175326220 - Exonic hg19 ESCA TCGA-L5-A891 3 Out-of-Frame Intra-chr q31.1 q31.1 Seq+ 5077 ChimerSeq FusionScan TCGA_RNA-Seq OLA1-GPR155 OLA1 chr2 175087760 - GPR155 chr2 175324816 - Exonic hg19 ESCA TCGA-L5-A891 3 Out-of-Frame Intra-chr q31.1 q31.1 Seq+ 5078 ChimerSeq FusionScan TCGA_RNA-Seq LSR-NLRP2 LSR chr19 35741562 + NLRP2 chr19 55481366 + Exonic hg19 ESCA TCGA-L5-A891 3 CDS-5'UTR Intra-chr q13.12 Seq+ 5079 ChimerSeq FusionScan TCGA_RNA-Seq HKR1-CEACAM7 HKR1 chr19 37838774 + CEACAM7 chr19 42191152 - Exonic hg19 ESCA TCGA-L5-A891 3 In-Frame Intra-chr q13.12 Transcription factor Seq+ 5080 ChimerSeq FusionScan TCGA_RNA-Seq SIM2-MORC3 SIM2 chr21 38103452 + MORC3 chr21 37721608 + Exonic hg19 ESCA TCGA-L5-A891 2 Out-of-Frame Intra-chr q22.13 Transcription factor q22.12 Seq+ 5081 ChimerSeq FusionScan TCGA_RNA-Seq KANSL1-NME1 KANSL1 chr17 44248220 - NME1 chr17 49233011 + Exonic hg19 ESCA TCGA-L5-A891 2 In-Frame Intra-chr q21.33 Tumor suppressor gene 5082 ChimerSeq FusionScan TCGA_RNA-Seq RAD54L-HGS RAD54L chr1 46725771 + HGS chr17 79662815 + Exonic hg19 ESCA TCGA-L5-A891 2 Out-of-Frame Inter-chr p34.1 q25.3 5083 ChimerSeq FusionScan TCGA_RNA-Seq CARM1-PLA2G4C CARM1 chr19 10982598 + PLA2G4C chr19 48556404 - Exonic hg19 ESCA TCGA-L5-A891 2 In-Frame Intra-chr p13.2 q13.33 Seq+ 5084 ChimerSeq FusionScan TCGA_RNA-Seq SMAD6-NPAS2 SMAD6 chr15 67004062 + NPAS2 chr2 101580519 + Exonic hg19 ESCA TCGA-L5-A891 2 In-Frame Inter-chr q22.31 q11.2 Tumor suppressor gene Transcription factor 5085 ChimerSeq FusionScan TCGA_RNA-Seq MAFF-MICALL1 MAFF chr22 38598219 + MICALL1 chr22 38313713 + Exonic hg19 ESCA TCGA-L5-A891 2 5'UTR-CDS Intra-chr q13.1 Transcription factor q13.1 5086 ChimerSeq FusionScan TCGA_RNA-Seq IP6K1-FOXRED2 IP6K1 chr3 49823786 - FOXRED2 chr22 36902470 - Exonic hg19 ESCA TCGA-L5-A891 2 5'UTR-5'UTR Inter-chr p21.31 q12.3 5087 ChimerSeq FusionScan TCGA_RNA-Seq DCUN1D2-RNF149 DCUN1D2 chr13 114144981 - RNF149 chr2 101898519 - Exonic hg19 ESCA TCGA-L5-A891 2 In-Frame Inter-chr q34 q11.2 5088 ChimerSeq FusionScan TCGA_RNA-Seq ANO7-HDLBP ANO7 chr2 242157796 + HDLBP chr2 242207956 - Exonic hg19 ESCA TCGA-L5-A891 2 CDS-5'UTR Intra-chr q37.3 q37.3 5089 ChimerSeq FusionScan TCGA_RNA-Seq PRPF31-ZNF547 PRPF31 chr19 54629992 + ZNF547 chr19 57879911 + Exonic hg19 ESCA TCGA-L5-A891 2 CDS-5'UTR Intra-chr q13.43 Transcription factor Seq+ 5090 ChimerSeq FusionScan TCGA_RNA-Seq SCAP-C19orf53 SCAP chr3 47484361 - C19orf53 chr19 13888865 + Exonic hg19 ESCA TCGA-L5-A891 2 Out-of-Frame Inter-chr p21.31 p13.13 5091 ChimerSeq FusionScan TCGA_RNA-Seq FBXO46-ZNF92 FBXO46 chr19 46234106 - ZNF92 chr7 64853718 + Exonic hg19 ESCA TCGA-L5-A891 2 5'UTR-5'UTR Inter-chr q13.32 q11.21 Transcription factor 5092 ChimerSeq FusionScan TCGA_RNA-Seq ZNF83-LIN7B ZNF83 chr19 53193695 - LIN7B chr19 49621111 + Exonic hg19 ESCA TCGA-L5-A891 2 5'UTR-CDS Intra-chr q13.41 Transcription factor q13.33 5093 ChimerSeq FusionScan TCGA_RNA-Seq CARD8-MYH14 CARD8 chr19 48759048 - MYH14 chr19 50752243 + Exonic hg19 ESCA TCGA-L5-A891 2 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 5094 ChimerSeq FusionScan TCGA_RNA-Seq ZNF542-ANGPTL6 ZNF542 chr19 56880706 + ANGPTL6 chr19 10205614 - Exonic hg19 ESCA TCGA-L5-A891 2 5'UTR-CDS Intra-chr p13.2 Seq+ 5095 ChimerSeq FusionScan TCGA_RNA-Seq TMEM38A-PPP5C TMEM38A chr19 16772152 + PPP5C chr19 46878860 + Exonic hg19 ESCA TCGA-L5-A891 2 Out-of-Frame Intra-chr p13.11 q13.32 5096 ChimerSeq FusionScan TCGA_RNA-Seq NT5C3-KBTBD2 NT5C3 chr7 33102179 - KBTBD2 chr7 32919554 - Exonic hg19 ESCA TCGA-L5-A891 2 5'UTR-5'UTR Intra-chr p14.3 5097 ChimerSeq FusionScan TCGA_RNA-Seq TTLL3-EEF1D TTLL3 chr3 9855029 + EEF1D chr8 144672251 - Exonic hg19 ESCA TCGA-L5-A891 2 5'UTR-5'UTR Inter-chr p25.3 5098 ChimerSeq FusionScan TCGA_RNA-Seq MEF2BNB-BCL3 MEF2BNB chr19 19291494 - BCL3 chr19 45261980 + Exonic hg19 ESCA TCGA-L5-A891 2 3'UTR-CDS Intra-chr q13.32 Oncogene 5099 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R13L-MBOAT7 PPP1R13L chr19 45885784 - MBOAT7 chr19 54678125 - Exonic hg19 ESCA TCGA-L5-A891 2 Out-of-Frame Intra-chr q13.32 Seq+ 5100 ChimerSeq FusionScan TCGA_RNA-Seq OLA1-GPR155 OLA1 chr2 175087760 - GPR155 chr2 175318569 - Exonic hg19 ESCA TCGA-L5-A891 2 In-Frame Intra-chr q31.1 q31.1 Seq+ 5101 ChimerSeq FusionScan TCGA_RNA-Seq ZNF790-C19orf45 ZNF790 chr19 37340903 - C19orf45 chr19 7570209 + Exonic hg19 ESCA TCGA-L5-A891 2 5'UTR-CDS Intra-chr q13.12 Transcription factor Seq+ 5102 ChimerSeq FusionScan TCGA_RNA-Seq DHX30-SMARCC1 DHX30 chr3 47870624 + SMARCC1 chr3 47814426 - Exonic hg19 ESCA TCGA-L5-A891 2 In-Frame Intra-chr p21.31 p21.31 Tumor suppressor gene 5103 ChimerSeq FusionScan TCGA_RNA-Seq ZNF417-CNFN ZNF417 chr19 58427746 - CNFN chr19 42893191 - Exonic hg19 ESCA TCGA-L5-A891 2 CDS-5'UTR Intra-chr q13.43 Transcription factor q13.2 Seq+ 5104 ChimerSeq FusionScan TCGA_RNA-Seq R3HCC1-GRIK5 R3HCC1 chr8 23147982 + GRIK5 chr19 42526506 - Exonic hg19 ESCA TCGA-L5-A891 2 In-Frame Inter-chr p21.3 q13.2 Seq+ 5105 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D15-LGR5 TBC1D15 chr12 72266783 + LGR5 chr12 71971704 + Exonic hg19 ESCA TCGA-L5-A891 2 Out-of-Frame Intra-chr q21.1 q21.1 Seq+ 5106 ChimerSeq FusionScan TCGA_RNA-Seq UBE2Q2-SCAPER UBE2Q2 chr15 76146828 + SCAPER chr15 76697020 - Exonic hg19 ESCA TCGA-L5-A891 2 Out-of-Frame Intra-chr q24.2 q24.3 5107 ChimerSeq FusionScan TCGA_RNA-Seq CAPZA1-CLCC1 CAPZA1 chr1 113162505 + CLCC1 chr1 109490340 - Exonic hg19 ESCA TCGA-L5-A891 2 In-Frame Intra-chr p13.2 p13.3 5108 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-TAF6 RCC1 chr1 28834672 + TAF6 chr7 99711891 - Exonic hg19 ESCA TCGA-L5-A891 2 5'UTR-5'UTR Inter-chr p35.3 q22.1 5109 ChimerSeq FusionScan TCGA_RNA-Seq HK2-ZNF121 HK2 chr2 75101576 + ZNF121 chr19 9679758 - Exonic hg19 ESCA TCGA-L5-A891 2 CDS-5'UTR Inter-chr p12 p13.2 Transcription factor Seq+ 5110 ChimerSeq FusionScan TCGA_RNA-Seq DLG1-ACAP2 DLG1 chr3 196921295 - ACAP2 chr3 195066046 - Exonic hg19 ESCA TCGA-LN-A4A8 2 In-Frame Intra-chr q29 Tumor suppressor gene q29 5111 ChimerSeq FusionScan TCGA_RNA-Seq FUBP3-ABL1 FUBP3 chr9 133455151 + ABL1 chr9 133738149 + Exonic hg19 ESCA TCGA-LN-A4A8 2 In-Frame Intra-chr q34.11 q34.12 TK:Abl Oncogene 5112 ChimerSeq FusionScan TCGA_RNA-Seq AAK1-NOP58 AAK1 chr2 69732700 - NOP58 chr2 203160396 + Exonic hg19 ESCA TCGA-LN-A4A8 2 In-Frame Intra-chr p13.3 Other:NAK q33.1 5113 ChimerSeq FusionScan TCGA_RNA-Seq ATAD5-IKZF3 ATAD5 chr17 29196664 + IKZF3 chr17 37922746 - Exonic hg19 ESCA TCGA-L5-A4OU 5 In-Frame Intra-chr q11.2 q21.1 Tumor suppressor gene Transcription factor Seq+ 5114 ChimerSeq FusionScan TCGA_RNA-Seq GATS-PILRB GATS chr7 99820219 - PILRB chr7 99952765 + Exonic hg19 ESCA TCGA-L5-A4OU 2 3'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 5115 ChimerSeq FusionScan TCGA_RNA-Seq MICALL2-ZFAND2A MICALL2 chr7 1498819 - ZFAND2A chr7 1197893 - Exonic hg19 ESCA TCGA-L5-A4OU 2 CDS-5'UTR Intra-chr p22.3 p22.3 Seq+ 5116 ChimerSeq FusionScan TCGA_RNA-Seq MAP2K4-PRR11 MAP2K4 chr17 11958308 + PRR11 chr17 57262414 + Exonic hg19 ESCA TCGA-L5-A4OU 2 In-Frame Intra-chr p12 STE:STE7 Oncogene Tumor suppressor gene q22 Seq+ 5117 ChimerSeq FusionScan TCGA_RNA-Seq PDXK-KLF10 PDXK chr21 45154004 + KLF10 chr8 103664625 - Exonic hg19 ESCA TCGA-L5-A4OX 14 Out-of-Frame Inter-chr q22.3 q22.3 Tumor suppressor gene Transcription factor Seq+ 5118 ChimerSeq FusionScan TCGA_RNA-Seq STAT5B-NSRP1 STAT5B chr17 40428265 - NSRP1 chr17 28499559 + Exonic hg19 ESCA TCGA-L5-A4OX 14 5'UTR-CDS Intra-chr q21.2 Transcription factor q11.2 Seq+ 5119 ChimerSeq FusionScan TCGA_RNA-Seq DYRK1A-DENND3 DYRK1A chr21 38739930 + DENND3 chr8 142185298 + Exonic hg19 ESCA TCGA-L5-A4OX 4 5'UTR-CDS Inter-chr q22.13 CMGC:DYRK q24.3 Seq+ 5120 ChimerSeq FusionScan TCGA_RNA-Seq ZHX2-ELP3 ZHX2 chr8 123875778 + ELP3 chr8 28013458 + Exonic hg19 ESCA TCGA-L5-A4OX 2 5'UTR-CDS Intra-chr q24.13 Tumor suppressor gene Transcription factor p21.1 5121 ChimerSeq FusionScan TCGA_RNA-Seq C16orf7-ANKRD11 C16orf7 chr16 89787170 - ANKRD11 chr16 89383486 - Exonic hg19 ESCA TCGA-L5-A4OX 2 CDS-5'UTR Intra-chr q24.3 5122 ChimerSeq FusionScan TCGA_RNA-Seq UBP1-TFCP2L1 UBP1 chr3 33453072 - TFCP2L1 chr2 122004546 - Exonic hg19 ESCA TCGA-L5-A4OX 2 In-Frame Inter-chr p22.3 Transcription factor q14.2 Transcription factor 5123 ChimerSeq FusionScan TCGA_RNA-Seq ZDHHC5-ASPSCR1 ZDHHC5 chr11 57435659 + ASPSCR1 chr17 79966912 + Exonic hg19 ESCA TCGA-L5-A4OI 2 5'UTR-5'UTR Inter-chr q12.1 q25.3 5124 ChimerSeq FusionScan TCGA_RNA-Seq TMBIM1-ABCB10 TMBIM1 chr2 219157188 - ABCB10 chr1 229685181 - Exonic hg19 ESCA TCGA-L5-A4OI 2 5'UTR-CDS Inter-chr q35 q42.13 5125 ChimerSeq FusionScan TCGA_RNA-Seq UBP1-TFCP2L1 UBP1 chr3 33453072 - TFCP2L1 chr2 122004546 - Exonic hg19 ESCA TCGA-R6-A8WC 2 In-Frame Inter-chr p22.3 Transcription factor q14.2 Transcription factor 5126 ChimerSeq FusionScan TCGA_RNA-Seq BTAF1-PHF10 BTAF1 chr10 93726514 + PHF10 chr6 170121207 - Exonic hg19 ESCA TCGA-R6-A8WC 2 In-Frame Inter-chr q23.32 q27 5127 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC17-SERINC2 ZCCHC17 chr1 31821821 + SERINC2 chr1 31883231 + Exonic hg19 ESCA TCGA-R6-A8WC 2 In-Frame Intra-chr p35.2 p35.2 5128 ChimerSeq FusionScan TCGA_RNA-Seq LIN52-AHSA1 LIN52 chr14 74551696 + AHSA1 chr14 77928502 + Exonic hg19 ESCA TCGA-IG-A6QS 3 In-Frame Intra-chr q24.3 q24.3 Seq+ 5129 ChimerSeq FusionScan TCGA_RNA-Seq TP63-PINX1 TP63 chr3 189526315 + PINX1 chr8 10623426 - Exonic hg19 ESCA TCGA-IG-A6QS 3 In-Frame Inter-chr q28 Tumor suppressor gene Transcription factor p23.1 Tumor suppressor gene 5130 ChimerSeq FusionScan TCGA_RNA-Seq TASP1-SEL1L2 TASP1 chr20 13604092 - SEL1L2 chr20 13830965 - Exonic hg19 ESCA TCGA-IG-A6QS 3 In-Frame Intra-chr p12.1 p12.1 Seq+ 5131 ChimerSeq FusionScan TCGA_RNA-Seq SAMHD1-MRPL52 SAMHD1 chr20 35559162 - MRPL52 chr14 23303380 + Exonic hg19 ESCA TCGA-IG-A6QS 2 In-Frame Inter-chr q11.23 q11.2 5132 ChimerSeq FusionScan TCGA_RNA-Seq DUOX1-COL17A1 DUOX1 chr15 45430212 + COL17A1 chr10 105799398 - Exonic hg19 ESCA TCGA-IG-A6QS 2 Out-of-Frame Inter-chr q21.1 q25.1 5133 ChimerSeq FusionScan TCGA_RNA-Seq ITGB1-GTF2I ITGB1 chr10 33247072 - GTF2I chr7 74143123 + Exonic hg19 ESCA TCGA-S8-A6BV 2 5'UTR-CDS Inter-chr p11.22 Tumor suppressor gene q11.23 Transcription factor 5134 ChimerSeq FusionScan TCGA_RNA-Seq STK24-MLPH STK24 chr13 99171496 - MLPH chr2 238419216 + Exonic hg19 ESCA TCGA-S8-A6BV 2 Out-of-Frame Inter-chr q32.2 q37.3 5135 ChimerSeq FusionScan TCGA_RNA-Seq CTNNBIP1-C1orf187 CTNNBIP1 chr1 9970152 - C1orf187 chr1 11766305 + Exonic hg19 ESCA TCGA-S8-A6BV 2 5'UTR-5'UTR Intra-chr p36.22 Tumor suppressor gene 5136 ChimerSeq FusionScan TCGA_RNA-Seq CTNND1-CLPB CTNND1 chr11 57577695 + CLPB chr11 72091428 - Exonic hg19 ESCA TCGA-L5-A4OO 8 Out-of-Frame Intra-chr q12.1 Tumor suppressor gene q13.4 Seq+ 5137 ChimerSeq FusionScan TCGA_RNA-Seq ATP8A1-SHISA3 ATP8A1 chr4 42524176 - SHISA3 chr4 42403028 + Exonic hg19 ESCA TCGA-L5-A4OO 4 Out-of-Frame Intra-chr p13 p13 Tumor suppressor gene Seq+ 5138 ChimerSeq FusionScan TCGA_RNA-Seq STARD3-RAB5C STARD3 chr17 37810003 + RAB5C chr17 40282608 - Exonic hg19 ESCA TCGA-M9-A5M8 10 Out-of-Frame Intra-chr q12 q21.2 Seq+ 5139 ChimerSeq FusionScan TCGA_RNA-Seq STARD3-RAB5C STARD3 chr17 37793484 + RAB5C chr17 40282608 - Exonic hg19 ESCA TCGA-M9-A5M8 3 5'UTR-5'UTR Intra-chr q12 q21.2 Seq+ 5140 ChimerSeq FusionScan TCGA_RNA-Seq FAM135A-LAMA2 FAM135A chr6 71162274 + LAMA2 chr6 129371062 + Exonic hg19 ESCA TCGA-M9-A5M8 3 In-Frame Intra-chr q13 q22.33 Seq+ 5141 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-MIEN1 GRB7 chr17 37894386 + MIEN1 chr17 37886544 - Exonic hg19 ESCA TCGA-M9-A5M8 3 5'UTR-CDS Intra-chr q12 q12 Seq+ 5142 ChimerSeq FusionScan TCGA_RNA-Seq ME2-SMAD4 ME2 chr18 48405678 + SMAD4 chr18 48604625 + Exonic hg19 ESCA TCGA-M9-A5M8 3 5'UTR-CDS Intra-chr q21.2 q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 5143 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-STARD3 ERBB2 chr17 37872858 + STARD3 chr17 37816463 + Exonic hg19 ESCA TCGA-M9-A5M8 2 In-Frame Intra-chr q12 Oncogene q12 Seq+ 5144 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-KRT10 ERBB2 chr17 37851434 + KRT10 chr17 38977369 - Exonic hg19 ESCA TCGA-M9-A5M8 2 5'UTR-CDS Intra-chr q12 Oncogene q21.2 Seq+ 5145 ChimerSeq FusionScan TCGA_RNA-Seq RNF4-WHSC1 RNF4 chr4 2502465 + WHSC1 chr4 1952798 + Exonic hg19 ESCA TCGA-JY-A938 9 In-Frame Intra-chr p16.3 Oncogene Seq+ 5146 ChimerSeq FusionScan TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128505576 - RSPO3 chr6 127469792 + Exonic hg19 ESCA TCGA-JY-A938 8 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 5147 ChimerSeq FusionScan TCGA_RNA-Seq LETM1-RGS12 LETM1 chr4 1824714 - RGS12 chr4 3344663 + Exonic hg19 ESCA TCGA-JY-A938 3 In-Frame Intra-chr p16.3 p16.3 5148 ChimerSeq FusionScan TCGA_RNA-Seq GPR111-TNFRSF21 GPR111 chr6 47631313 + TNFRSF21 chr6 47221257 - Exonic hg19 ESCA TCGA-L5-A88Y 15 5'UTR-CDS Intra-chr p12.3 Seq+ 5149 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHA1-CYP2C19 PLEKHA1 chr10 124159904 + CYP2C19 chr10 96602593 + Exonic hg19 ESCA TCGA-L5-A88Y 8 In-Frame Intra-chr q26.13 q23.33 Oncogene Seq+ 5150 ChimerSeq FusionScan TCGA_RNA-Seq GPR111-TNFRSF21 GPR111 chr6 47624395 + TNFRSF21 chr6 47221257 - Exonic hg19 ESCA TCGA-L5-A88Y 3 5'UTR-CDS Intra-chr p12.3 Seq+ 5151 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHA1-CYP2C18 PLEKHA1 chr10 124159904 + CYP2C18 chr10 96484102 + Exonic hg19 ESCA TCGA-L5-A88Y 3 In-Frame Intra-chr q26.13 q23.33 5152 ChimerSeq FusionScan TCGA_RNA-Seq PPP4R1L-ZNF706 PPP4R1L chr20 56884281 - ZNF706 chr8 102213971 - Exonic hg19 ESCA TCGA-L5-A88Y 2 3'UTR-5'UTR Inter-chr q13.32 q22.3 Transcription factor 5153 ChimerSeq FusionScan TCGA_RNA-Seq HPSE2-TIMM23 HPSE2 chr10 100903994 - TIMM23 chr10 51592619 - Exonic hg19 ESCA TCGA-L5-A88Y 2 In-Frame Intra-chr q24.2 q11.22 5154 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-MIEN1 GRB7 chr17 37898709 + MIEN1 chr17 37886544 - Exonic hg19 ESCA TCGA-2H-A9GF 45 In-Frame Intra-chr q12 q12 Seq+ 5155 ChimerSeq FusionScan TCGA_RNA-Seq STARD3-IKZF3 STARD3 chr17 37793484 + IKZF3 chr17 37988404 - Exonic hg19 ESCA TCGA-2H-A9GF 20 5'UTR-CDS Intra-chr q12 q21.1 Tumor suppressor gene Transcription factor Seq+ 5156 ChimerSeq FusionScan TCGA_RNA-Seq AGAP1-C1orf115 AGAP1 chr2 236877267 + C1orf115 chr1 220869953 + Exonic hg19 ESCA TCGA-2H-A9GF 9 Out-of-Frame Inter-chr q37.2 q41 Seq+ 5157 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-PGAP3 ERBB2 chr17 37856564 + PGAP3 chr17 37842272 - Exonic hg19 ESCA TCGA-2H-A9GF 3 In-Frame Intra-chr q12 Oncogene q12 Oncogene Seq+ 5158 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-PGAP3 ERBB2 chr17 37856564 + PGAP3 chr17 37830932 - Exonic hg19 ESCA TCGA-2H-A9GF 2 Out-of-Frame Intra-chr q12 Oncogene q12 Oncogene Seq+ 5159 ChimerSeq FusionScan TCGA_RNA-Seq TFDP2-XRN1 TFDP2 chr3 141820576 - XRN1 chr3 142084208 - Exonic hg19 ESCA TCGA-2H-A9GF 2 In-Frame Intra-chr q23 Transcription factor q23 Seq+ 5160 ChimerSeq FusionScan TCGA_RNA-Seq COX6C-VPS13B COX6C chr8 100905866 - VPS13B chr8 100883675 + Exonic hg19 ESCA TCGA-VR-A8EX 5 5'UTR-CDS Intra-chr q22.2 q22.2 Seq+ 5161 ChimerSeq FusionScan TCGA_RNA-Seq MDH1-USP18 MDH1 chr2 63816180 + USP18 chr22 18659538 + Exonic hg19 ESCA TCGA-VR-A8EX 2 Out-of-Frame Inter-chr p15 q11.21 5162 ChimerSeq FusionScan TCGA_RNA-Seq WASF2-IFI6 WASF2 chr1 27816496 - IFI6 chr1 27995857 - Exonic hg19 ESCA TCGA-VR-A8EX 2 5'UTR-5'UTR Intra-chr p36.11 p35.3 Seq+ 5163 ChimerSeq FusionScan TCGA_RNA-Seq PRKAG2-C7orf42 PRKAG2 chr7 151269749 - C7orf42 chr7 66409962 + Exonic hg19 ESCA TCGA-VR-A8EX 2 Out-of-Frame Intra-chr q36.1 5164 ChimerSeq FusionScan TCGA_RNA-Seq MAP3K7-KIAA1009 MAP3K7 chr6 91296482 - KIAA1009 chr6 84872989 - Exonic hg19 ESCA TCGA-VR-A8EX 2 In-Frame Intra-chr q15 STE:STE11 Oncogene 5165 ChimerSeq FusionScan TCGA_RNA-Seq CLPB-GOLGA8A CLPB chr11 72069923 - GOLGA8A chr15 34699936 - Exonic hg19 ESCA TCGA-LN-A49W 5 CDS-3'UTR Inter-chr q13.4 q14 Seq+ 5166 ChimerSeq FusionScan TCGA_RNA-Seq SLTM-LPHN1 SLTM chr15 59224554 - LPHN1 chr19 14288556 - Exonic hg19 ESCA TCGA-LN-A49W 2 In-Frame Inter-chr q22.1 Seq+ 5167 ChimerSeq FusionScan TCGA_RNA-Seq ACO1-NFIB ACO1 chr9 32384733 + NFIB chr9 14155892 - Exonic hg19 ESCA TCGA-LN-A49W 2 5'UTR-CDS Intra-chr p21.1 p22.3 Transcription factor 5168 ChimerSeq FusionScan TCGA_RNA-Seq DYNC1LI2-NAE1 DYNC1LI2 chr16 66783099 - NAE1 chr16 66839929 - Exonic hg19 ESCA TCGA-VR-A8Q7 42 In-Frame Intra-chr q22.1 q22.1 Seq+ 5169 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57725762 + VMP1 chr17 57915655 + Exonic hg19 ESCA TCGA-VR-A8Q7 21 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 5170 ChimerSeq FusionScan TCGA_RNA-Seq TYK2-TMEM205 TYK2 chr19 10490290 - TMEM205 chr19 11456304 - Exonic hg19 ESCA TCGA-VR-A8Q7 20 5'UTR-5'UTR Intra-chr p13.2 TK:JakA p13.2 Seq+ 5171 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1432-LARS KIAA1432 chr9 5757451 + LARS chr5 145515227 - Exonic hg19 ESCA TCGA-VR-A8Q7 13 In-Frame Inter-chr q32 Seq+ 5172 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 ESCA TCGA-VR-A8Q7 7 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 5173 ChimerSeq FusionScan TCGA_RNA-Seq TYK2-TMEM205 TYK2 chr19 10490290 - TMEM205 chr19 11453796 - Exonic hg19 ESCA TCGA-VR-A8Q7 5 5'UTR-CDS Intra-chr p13.2 TK:JakA p13.2 Seq+ 5174 ChimerSeq FusionScan TCGA_RNA-Seq SEMA3F-RNF123 SEMA3F chr3 50197167 + RNF123 chr3 49742082 + Exonic hg19 ESCA TCGA-VR-A8Q7 5 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 5175 ChimerSeq FusionScan TCGA_RNA-Seq PLEK2-RDH11 PLEK2 chr14 67854940 - RDH11 chr14 68159769 - Exonic hg19 ESCA TCGA-VR-A8Q7 3 Out-of-Frame Intra-chr q24.1 q24.1 5176 ChimerSeq FusionScan TCGA_RNA-Seq TYK2-RAB3D TYK2 chr19 10490290 - RAB3D chr19 11448136 - Exonic hg19 ESCA TCGA-VR-A8Q7 3 5'UTR-5'UTR Intra-chr p13.2 TK:JakA p13.2 5177 ChimerSeq FusionScan TCGA_RNA-Seq LARS-KIAA1432 LARS chr5 145519766 - KIAA1432 chr9 5762540 + Exonic hg19 ESCA TCGA-VR-A8Q7 2 In-Frame Inter-chr q32 5178 ChimerSeq FusionScan TCGA_RNA-Seq SYNJ1-GCFC1 SYNJ1 chr21 34099082 - GCFC1 chr21 34109719 - Exonic hg19 ESCA TCGA-VR-A8Q7 2 Out-of-Frame Intra-chr q22.11 5179 ChimerSeq FusionScan TCGA_RNA-Seq S100PBP-ZBTB8A S100PBP chr1 33293682 + ZBTB8A chr1 33058531 + Exonic hg19 ESCA TCGA-VR-A8Q7 2 CDS-5'UTR Intra-chr p35.1 p35.1 Transcription factor Seq+ 5180 ChimerSeq FusionScan TCGA_RNA-Seq TLE3-YWHAH TLE3 chr15 70345565 - YWHAH chr22 32352125 + Exonic hg19 ESCA TCGA-VR-A8Q7 2 In-Frame Inter-chr q23 q12.3 Seq+ 5181 ChimerSeq FusionScan TCGA_RNA-Seq MGLL-EEFSEC MGLL chr3 127500631 - EEFSEC chr3 127965678 + Exonic hg19 ESCA TCGA-VR-A8Q7 2 In-Frame Intra-chr q21.3 q21.3 Seq+ 5182 ChimerSeq FusionScan TCGA_RNA-Seq METTL10-CTBP2 METTL10 chr10 126453960 - CTBP2 chr10 126678267 - Exonic hg19 ESCA TCGA-VR-A8Q7 2 Out-of-Frame Intra-chr q26.13 Seq+ 5183 ChimerSeq FusionScan TCGA_RNA-Seq C10orf28-AVPI1 C10orf28 chr10 99894463 + AVPI1 chr10 99439672 - Exonic hg19 ESCA TCGA-L5-A88T 2 5'UTR-5'UTR Intra-chr q24.2 5184 ChimerSeq FusionScan TCGA_RNA-Seq SYNRG-HNF1B SYNRG chr17 35921296 - HNF1B chr17 36070671 - Exonic hg19 ESCA TCGA-L5-A88T 2 In-Frame Intra-chr q12 Transcription factor 5185 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-DCUN1D1 TBL1XR1 chr3 176914908 - DCUN1D1 chr3 182683541 - Exonic hg19 ESCA TCGA-LN-A8I1 7 5'UTR-CDS Intra-chr q26.32 q26.33 Oncogene Seq+ 5186 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-MCF2L2 TBL1XR1 chr3 176914908 - MCF2L2 chr3 183107567 - Exonic hg19 ESCA TCGA-LN-A8I1 4 5'UTR-CDS Intra-chr q26.32 q27.1 Seq+ 5187 ChimerSeq FusionScan TCGA_RNA-Seq AKR1B10-POLR2I AKR1B10 chr7 134215562 + POLR2I chr19 36605314 - Exonic hg19 ESCA TCGA-LN-A8I1 2 In-Frame Inter-chr q33 q13.12 5188 ChimerSeq FusionScan TCGA_RNA-Seq IQCE-CCDC57 IQCE chr7 2641098 + CCDC57 chr17 80086473 - Exonic hg19 ESCA TCGA-LN-A8I1 2 In-Frame Inter-chr p22.3 q25.3 5189 ChimerSeq FusionScan TCGA_RNA-Seq NFE2L3-C16orf62 NFE2L3 chr7 26192688 + C16orf62 chr16 19680481 + Exonic hg19 ESCA TCGA-LN-A8I1 2 Out-of-Frame Inter-chr p15.2 Transcription factor p12.3 5190 ChimerSeq FusionScan TCGA_RNA-Seq ST3GAL3-PTPRF ST3GAL3 chr1 44280605 + PTPRF chr1 44069086 + Exonic hg19 ESCA TCGA-LN-A7HV 6 Out-of-Frame Intra-chr p34.1 p34.2 Seq+ 5191 ChimerSeq FusionScan TCGA_RNA-Seq RAB9A-EGFL6 RAB9A chrX 13722021 + EGFL6 chrX 13635848 + Exonic hg19 ESCA TCGA-LN-A7HV 5 5'UTR-CDS Intra-chr p22.2 p22.2 Seq+ 5192 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 ESCA TCGA-LN-A7HV 4 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 5193 ChimerSeq FusionScan TCGA_RNA-Seq RNGTT-SRSF12 RNGTT chr6 89673064 - SRSF12 chr6 89816977 - Exonic hg19 ESCA TCGA-LN-A7HV 3 Out-of-Frame Intra-chr q15 q15 Seq+ 5194 ChimerSeq FusionScan TCGA_RNA-Seq SP2-KPNB1 SP2 chr17 45973659 + KPNB1 chr17 45740454 + Exonic hg19 ESCA TCGA-LN-A7HV 3 Out-of-Frame Intra-chr q21.32 Transcription factor q21.32 Seq+ 5195 ChimerSeq FusionScan TCGA_RNA-Seq ATXN2L-TCF25 ATXN2L chr16 28834879 + TCF25 chr16 89976998 + Exonic hg19 ESCA TCGA-LN-A7HV 2 In-Frame Intra-chr p11.2 q24.3 5196 ChimerSeq FusionScan TCGA_RNA-Seq ITGA9-SPATS2L ITGA9 chr3 37792060 + SPATS2L chr2 201194153 + Exonic hg19 ESCA TCGA-LN-A7HV 2 CDS-5'UTR Inter-chr p22.2 Oncogene q33.1 5197 ChimerSeq FusionScan TCGA_RNA-Seq SHC3-MYH10 SHC3 chr9 91727470 - MYH10 chr17 8452105 - Exonic hg19 ESCA TCGA-LN-A7HV 2 Out-of-Frame Inter-chr q22.1 p13.1 5198 ChimerSeq FusionScan TCGA_RNA-Seq CECR7-SRSF2 CECR7 chr22 17518234 + SRSF2 chr17 74731240 - Exonic hg19 ESCA TCGA-LN-A7HV 2 5'UTR-3'UTR Inter-chr q11.1 q25.1 Oncogene 5199 ChimerSeq FusionScan TCGA_RNA-Seq SNRPD1-ABHD3 SNRPD1 chr18 19192404 + ABHD3 chr18 19239304 - Exonic hg19 ESCA TCGA-LN-A7HV 2 In-Frame Intra-chr q11.2 q11.2 5200 ChimerSeq FusionScan TCGA_RNA-Seq C1orf172-SLC9A1 C1orf172 chr1 27286840 - SLC9A1 chr1 27428621 - Exonic hg19 ESCA TCGA-LN-A7HV 2 5'UTR-CDS Intra-chr p36.11 5201 ChimerSeq FusionScan TCGA_RNA-Seq ACACA-LASP1 ACACA chr17 35536200 - LASP1 chr17 37034338 + Exonic hg19 ESCA TCGA-L5-A4OQ 30 In-Frame Intra-chr q12 Seq+ 5202 ChimerSeq FusionScan TCGA_RNA-Seq OLA1-CIR1 OLA1 chr2 175087760 - CIR1 chr2 175216453 - Exonic hg19 ESCA TCGA-L5-A4OQ 30 In-Frame Intra-chr q31.1 q31.1 Seq+ 5203 ChimerSeq FusionScan TCGA_RNA-Seq TRPC4AP-RBM39 TRPC4AP chr20 33657098 - RBM39 chr20 34304727 - Exonic hg19 ESCA TCGA-L5-A4OQ 27 In-Frame Intra-chr q11.22 q11.22 Seq+ 5204 ChimerSeq FusionScan TCGA_RNA-Seq FAM102A-WDR93 FAM102A chr9 130715853 - WDR93 chr15 90286522 + Exonic hg19 ESCA TCGA-L5-A4OQ 26 Out-of-Frame Inter-chr q34.11 q26.1 Seq+ 5205 ChimerSeq FusionScan TCGA_RNA-Seq TATDN2-FANCD2 TATDN2 chr3 10291298 + FANCD2 chr3 10142871 + Exonic hg19 ESCA TCGA-L5-A4OQ 24 In-Frame Intra-chr p25.3 p25.3 Oncogene Seq+ 5206 ChimerSeq FusionScan TCGA_RNA-Seq PIEZO1-CBFA2T3 PIEZO1 chr16 88815791 - CBFA2T3 chr16 88968064 - Exonic hg19 ESCA TCGA-L5-A4OQ 23 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene Seq+ 5207 ChimerSeq FusionScan TCGA_RNA-Seq CTNNA1-EGR1 CTNNA1 chr5 138163407 + EGR1 chr5 137802445 + Exonic hg19 ESCA TCGA-L5-A4OQ 23 Out-of-Frame Intra-chr q31.2 Oncogene q31.2 Tumor suppressor gene Transcription factor Seq+ 5208 ChimerSeq FusionScan TCGA_RNA-Seq C7orf50-MAD1L1 C7orf50 chr7 1166892 - MAD1L1 chr7 1855864 - Exonic hg19 ESCA TCGA-L5-A4OQ 22 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 5209 ChimerSeq FusionScan TCGA_RNA-Seq NUP188-PHYHD1 NUP188 chr9 131711522 + PHYHD1 chr9 131703723 + Exonic hg19 ESCA TCGA-L5-A4OQ 16 In-Frame Intra-chr q34.11 q34.11 Seq+ 5210 ChimerSeq FusionScan TCGA_RNA-Seq MACROD1-BAD MACROD1 chr11 63918710 - BAD chr11 64051848 - Exonic hg19 ESCA TCGA-L5-A4OQ 15 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 5211 ChimerSeq FusionScan TCGA_RNA-Seq UBA2-MIER2 UBA2 chr19 34941269 + MIER2 chr19 334542 - Exonic hg19 ESCA TCGA-L5-A4OQ 14 In-Frame Intra-chr q13.11 p13.3 Seq+ 5212 ChimerSeq FusionScan TCGA_RNA-Seq TTLL5-JDP2 TTLL5 chr14 76259443 + JDP2 chr14 75928128 + Exonic hg19 ESCA TCGA-L5-A4OQ 13 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene Transcription factor Seq+ 5213 ChimerSeq FusionScan TCGA_RNA-Seq NUP188-PHYHD1 NUP188 chr9 131711522 + PHYHD1 chr9 131702877 + Exonic hg19 ESCA TCGA-L5-A4OQ 12 In-Frame Intra-chr q34.11 q34.11 Seq+ 5214 ChimerSeq FusionScan TCGA_RNA-Seq TLK1-KCNH7 TLK1 chr2 171974248 - KCNH7 chr2 163393590 - Exonic hg19 ESCA TCGA-L5-A4OQ 11 Out-of-Frame Intra-chr q31.1 Other:TLK q24.2 Seq+ 5215 ChimerSeq FusionScan TCGA_RNA-Seq SMURF1-PTCD1 SMURF1 chr7 98741348 - PTCD1 chr7 99027429 - Exonic hg19 ESCA TCGA-L5-A4OQ 11 Out-of-Frame Intra-chr q22.1 Seq+ 5216 ChimerSeq FusionScan TCGA_RNA-Seq USP32-RBFOX3 USP32 chr17 58422841 - RBFOX3 chr17 77303906 - Exonic hg19 ESCA TCGA-L5-A4OQ 11 CDS-5'UTR Intra-chr q23.2 q25.3 Seq+ 5217 ChimerSeq FusionScan TCGA_RNA-Seq NCOA6-TRPC4AP NCOA6 chr20 33413274 - TRPC4AP chr20 33637797 - Exonic hg19 ESCA TCGA-L5-A4OQ 10 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 5218 ChimerSeq FusionScan TCGA_RNA-Seq EEA1-UBE2N EEA1 chr12 93322818 - UBE2N chr12 93805075 - Exonic hg19 ESCA TCGA-L5-A4OQ 10 In-Frame Intra-chr q22 Transcription factor q22 Seq+ 5219 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 ESCA TCGA-L5-A4OQ 8 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 5220 ChimerSeq FusionScan TCGA_RNA-Seq CBFB-NAE1 CBFB chr16 67070658 + NAE1 chr16 66857503 - Exonic hg19 ESCA TCGA-L5-A4OQ 8 In-Frame Intra-chr q22.1 q22.1 Seq+ 5221 ChimerSeq FusionScan TCGA_RNA-Seq BAIAP2L2-TMEM184B BAIAP2L2 chr22 38493038 - TMEM184B chr22 38627340 - Exonic hg19 ESCA TCGA-L5-A4OQ 8 Out-of-Frame Intra-chr q13.1 q13.1 Seq+ 5222 ChimerSeq FusionScan TCGA_RNA-Seq SAT1-APOO SAT1 chrX 23802000 + APOO chrX 23899069 - Exonic hg19 ESCA TCGA-L5-A4OQ 7 Out-of-Frame Intra-chr p22.11 p22.11 5223 ChimerSeq FusionScan TCGA_RNA-Seq MPRIP-CCDC144A MPRIP chr17 16946285 + CCDC144A chr17 16664738 + Exonic hg19 ESCA TCGA-L5-A4OQ 7 In-Frame Intra-chr p11.2 p11.2 5224 ChimerSeq FusionScan TCGA_RNA-Seq FAM222B-PHF12 FAM222B chr17 27169699 - PHF12 chr17 27237387 - Exonic hg19 ESCA TCGA-L5-A4OQ 7 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 5225 ChimerSeq FusionScan TCGA_RNA-Seq NUP214-ABL1 NUP214 chr9 134027281 + ABL1 chr9 133747515 + Exonic hg19 ESCA TCGA-L5-A4OQ 7 In-Frame Intra-chr q34.13 Oncogene q34.12 TK:Abl Oncogene KB Pub Seq+ 5226 ChimerSeq FusionScan TCGA_RNA-Seq EPHB2-ZBTB40 EPHB2 chr1 23111569 + ZBTB40 chr1 22843792 + Exonic hg19 ESCA TCGA-L5-A4OQ 7 In-Frame Intra-chr p36.12 Tumor suppressor gene p36.12 Transcription factor Seq+ 5227 ChimerSeq FusionScan TCGA_RNA-Seq SNX27-PIP5K1A SNX27 chr1 151655921 + PIP5K1A chr1 151212430 + Exonic hg19 ESCA TCGA-L5-A4OQ 7 In-Frame Intra-chr q21.3 q21.3 Seq+ 5228 ChimerSeq FusionScan TCGA_RNA-Seq PTPN4-PCDP1 PTPN4 chr2 120658382 + PCDP1 chr2 120306660 + Exonic hg19 ESCA TCGA-L5-A4OQ 6 CDS-5'UTR Intra-chr q14.2 Seq+ 5229 ChimerSeq FusionScan TCGA_RNA-Seq SMC3-MXI1 SMC3 chr10 112350330 + MXI1 chr10 112038937 + Exonic hg19 ESCA TCGA-L5-A4OQ 6 In-Frame Intra-chr q25.2 q25.2 Tumor suppressor gene Transcription factor Seq+ 5230 ChimerSeq FusionScan TCGA_RNA-Seq PXN-SRSF9 PXN chr12 120660351 - SRSF9 chr12 120903590 - Exonic hg19 ESCA TCGA-L5-A4OQ 6 In-Frame Intra-chr q24.23 q24.31 5231 ChimerSeq FusionScan TCGA_RNA-Seq MYH14-GPR19 MYH14 chr19 50714027 + GPR19 chr12 12848445 - Exonic hg19 ESCA TCGA-L5-A4OQ 5 CDS-5'UTR Inter-chr q13.33 p13.1 Seq+ 5232 ChimerSeq FusionScan TCGA_RNA-Seq MXD3-FAM193B MXD3 chr5 176734781 - FAM193B chr5 176966148 - Exonic hg19 ESCA TCGA-L5-A4OQ 5 Out-of-Frame Intra-chr q35.3 Transcription factor q35.3 5233 ChimerSeq FusionScan TCGA_RNA-Seq FAM222B-PHF12 FAM222B chr17 27161310 - PHF12 chr17 27237387 - Exonic hg19 ESCA TCGA-L5-A4OQ 5 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 5234 ChimerSeq FusionScan TCGA_RNA-Seq PTK2-SLC45A4 PTK2 chr8 141900641 - SLC45A4 chr8 142231864 - Exonic hg19 ESCA TCGA-L5-A4OQ 4 Out-of-Frame Intra-chr q24.3 q24.3 Seq+ 5235 ChimerSeq FusionScan TCGA_RNA-Seq COL27A1-ZNF618 COL27A1 chr9 117054490 + ZNF618 chr9 116731396 + Exonic hg19 ESCA TCGA-L5-A4OQ 4 In-Frame Intra-chr q32 q32 Transcription factor Seq+ 5236 ChimerSeq FusionScan TCGA_RNA-Seq PACSIN2-SCUBE1 PACSIN2 chr22 43308026 - SCUBE1 chr22 43716071 - Exonic hg19 ESCA TCGA-L5-A4OQ 4 Out-of-Frame Intra-chr q13.2 q13.2 5237 ChimerSeq FusionScan TCGA_RNA-Seq TUBB3-TCF25 TUBB3 chr16 89999986 + TCF25 chr16 89976998 + Exonic hg19 ESCA TCGA-L5-A4OQ 4 Out-of-Frame Intra-chr q24.3 q24.3 5238 ChimerSeq FusionScan TCGA_RNA-Seq CBL-PHLDB1 CBL chr11 119077322 + PHLDB1 chr11 118484530 + Exonic hg19 ESCA TCGA-L5-A4OQ 4 CDS-5'UTR Intra-chr q23.3 Oncogene Tumor suppressor gene q23.3 Seq+ 5239 ChimerSeq FusionScan TCGA_RNA-Seq STK4-YWHAB STK4 chr20 43653771 + YWHAB chr20 43530171 + Exonic hg19 ESCA TCGA-L5-A4OQ 3 CDS-5'UTR Intra-chr q13.12 q13.12 5240 ChimerSeq FusionScan TCGA_RNA-Seq C19orf55-MARCH2 C19orf55 chr19 36259138 + 2019_ 3_ 2_ chr19 8503271 + Exonic hg19 ESCA TCGA-L5-A4OQ 3 Out-of-Frame Intra-chr p13.2 5241 ChimerSeq FusionScan TCGA_RNA-Seq SNX30-KIAA1958 SNX30 chr9 115513437 + KIAA1958 chr9 115407929 + Exonic hg19 ESCA TCGA-L5-A4OQ 3 Out-of-Frame Intra-chr q32 q32 Seq+ 5242 ChimerSeq FusionScan TCGA_RNA-Seq RAD54L-MAST2 RAD54L chr1 46715791 + MAST2 chr1 46498267 + Exonic hg19 ESCA TCGA-L5-A4OQ 3 In-Frame Intra-chr p34.1 p34.1 AGC:MAST Seq+ 5243 ChimerSeq FusionScan TCGA_RNA-Seq VPS33A-ABCB9 VPS33A chr12 122734417 - ABCB9 chr12 123435112 - Exonic hg19 ESCA TCGA-L5-A4OQ 3 In-Frame Intra-chr q24.31 q24.31 Seq+ 5244 ChimerSeq FusionScan TCGA_RNA-Seq PLCE1-LGI1 PLCE1 chr10 95995877 + LGI1 chr10 95537135 + Exonic hg19 ESCA TCGA-L5-A4OQ 3 In-Frame Intra-chr q23.33 Tumor suppressor gene q23.33 5245 ChimerSeq FusionScan TCGA_RNA-Seq PRPF3-VPS45 PRPF3 chr1 150312953 + VPS45 chr1 150116886 + Exonic hg19 ESCA TCGA-L5-A4OQ 3 Out-of-Frame Intra-chr q21.2 q21.2 5246 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB17-ARHGEF19 ZBTB17 chr1 16273429 - ARHGEF19 chr1 16531920 - Exonic hg19 ESCA TCGA-L5-A4OQ 3 In-Frame Intra-chr p36.13 Transcription factor p36.13 5247 ChimerSeq FusionScan TCGA_RNA-Seq RHPN2-BRSK1 RHPN2 chr19 33555689 - BRSK1 chr19 55798374 + Exonic hg19 ESCA TCGA-L5-A4OQ 3 Out-of-Frame Intra-chr q13.11 q13.42 CAMK:CAMKL Tumor suppressor gene Seq+ 5248 ChimerSeq FusionScan TCGA_RNA-Seq SNX27-PIP5K1A SNX27 chr1 151584988 + PIP5K1A chr1 151206672 + Exonic hg19 ESCA TCGA-L5-A4OQ 2 Out-of-Frame Intra-chr q21.3 q21.3 Seq+ 5249 ChimerSeq FusionScan TCGA_RNA-Seq NAIP-GTF2H2D NAIP chr5 70275695 - GTF2H2D chr5 68874538 + Exonic hg19 ESCA TCGA-L5-A4OQ 2 Out-of-Frame Intra-chr q13.2 5250 ChimerSeq FusionScan TCGA_RNA-Seq API5-LCMT1 API5 chr11 43357544 + LCMT1 chr16 25172422 + Exonic hg19 ESCA TCGA-L5-A4OQ 2 In-Frame Inter-chr p12 p12.1 5251 ChimerSeq FusionScan TCGA_RNA-Seq ATG10-CERS6 ATG10 chr5 81354421 + CERS6 chr2 169622101 + Exonic hg19 ESCA TCGA-L5-A4OQ 2 Out-of-Frame Inter-chr q14.1 q24.3 5252 ChimerSeq FusionScan TCGA_RNA-Seq NUP188-PHYHD1 NUP188 chr9 131711522 + PHYHD1 chr9 131702647 + Exonic hg19 ESCA TCGA-L5-A4OQ 2 In-Frame Intra-chr q34.11 q34.11 Seq+ 5253 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC17-SERINC2 ZCCHC17 chr1 31821821 + SERINC2 chr1 31883231 + Exonic hg19 ESCA TCGA-L5-A4OQ 2 In-Frame Intra-chr p35.2 p35.2 5254 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2IP-PPWD1 ERBB2IP chr5 65222634 + PPWD1 chr5 64863339 + Exonic hg19 ESCA TCGA-L5-A4OQ 2 5'UTR-5'UTR Intra-chr q12.3 Seq+ 5255 ChimerSeq FusionScan TCGA_RNA-Seq UBQLN1-DNAJC8 UBQLN1 chr9 86292641 - DNAJC8 chr1 28541507 - Exonic hg19 ESCA TCGA-L5-A4OQ 2 Out-of-Frame Inter-chr q21.32 p35.3 5256 ChimerSeq FusionScan TCGA_RNA-Seq INPP5F-PAPSS2 INPP5F chr10 121485871 + PAPSS2 chr10 89500991 + Exonic hg19 ESCA TCGA-L5-A4OQ 2 Out-of-Frame Intra-chr q26.11 q23.2 5257 ChimerSeq FusionScan TCGA_RNA-Seq SMC3-MXI1 SMC3 chr10 112350890 + MXI1 chr10 112038937 + Exonic hg19 ESCA TCGA-L5-A4OQ 2 Out-of-Frame Intra-chr q25.2 q25.2 Tumor suppressor gene Transcription factor Seq+ 5258 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0232-RPL30 KIAA0232 chr4 6826411 + RPL30 chr8 99057627 - Exonic hg19 ESCA TCGA-L5-A4OQ 2 CDS-5'UTR Inter-chr p16.1 q22.2 5259 ChimerSeq FusionScan TCGA_RNA-Seq STRBP-DENND1A STRBP chr9 126030714 - DENND1A chr9 126146192 - Exonic hg19 ESCA TCGA-L5-A4OQ 2 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 5260 ChimerSeq FusionScan TCGA_RNA-Seq ATP11A-TIMP2 ATP11A chr13 113439571 + TIMP2 chr17 76870001 - Exonic hg19 ESCA TCGA-L5-A4OQ 2 Out-of-Frame Inter-chr q34 q25.3 5261 ChimerSeq FusionScan TCGA_RNA-Seq HNF1B-ARHGAP40 HNF1B chr17 36091585 - ARHGAP40 chr20 37252001 + Exonic hg19 ESCA TCGA-L5-A4OQ 2 Out-of-Frame Inter-chr q12 Transcription factor q11.23 5262 ChimerSeq FusionScan TCGA_RNA-Seq TMSB10-CTNNB1 TMSB10 chr2 85132842 + CTNNB1 chr3 41265511 + Exonic hg19 ESCA TCGA-L5-A4OQ 2 5'UTR-5'UTR Inter-chr p11.2 p22.1 Oncogene 5263 ChimerSeq FusionScan TCGA_RNA-Seq ADNP-NFATC2 ADNP chr20 49547362 - NFATC2 chr20 50007988 - Exonic hg19 ESCA TCGA-L5-A4OQ 2 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.2 Tumor suppressor gene Transcription factor Seq+ 5264 ChimerSeq FusionScan TCGA_RNA-Seq TATDN2-BRK1 TATDN2 chr3 10291298 + BRK1 chr3 10167309 + Exonic hg19 ESCA TCGA-L5-A4OQ 2 Out-of-Frame Intra-chr p25.3 p25.3 5265 ChimerSeq FusionScan TCGA_RNA-Seq ADNP-NFATC2 ADNP chr20 49547362 - NFATC2 chr20 50015267 - Exonic hg19 ESCA TCGA-L5-A4OQ 2 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.2 Tumor suppressor gene Transcription factor Seq+ 5266 ChimerSeq FusionScan TCGA_RNA-Seq CEP89-GTF2E2 CEP89 chr19 33422334 - GTF2E2 chr8 30437913 - Exonic hg19 ESCA TCGA-L5-A4OQ 2 Out-of-Frame Inter-chr q13.11 p12 5267 ChimerSeq FusionScan TCGA_RNA-Seq FAM222B-MYO18A FAM222B chr17 27161310 - MYO18A chr17 27409456 - Exonic hg19 ESCA TCGA-L5-A4OQ 2 5'UTR-CDS Intra-chr q11.2 q11.2 Oncogene Seq+ 5268 ChimerSeq FusionScan TCGA_RNA-Seq CCDC84-RPS25 CCDC84 chr11 118886455 + RPS25 chr11 118886468 - Exonic hg19 ESCA TCGA-L5-A4OQ 2 3'UTR-3'UTR Intra-chr 5269 ChimerSeq FusionScan TCGA_RNA-Seq SEC31A-FAM175A SEC31A chr4 83812240 - FAM175A chr4 84403397 - Exonic hg19 ESCA TCGA-L5-A4OQ 2 Out-of-Frame Intra-chr q21.22 q21.23 Seq+ 5270 ChimerSeq FusionScan TCGA_RNA-Seq PRPF3-VPS45 PRPF3 chr1 150315928 + VPS45 chr1 150116886 + Exonic hg19 ESCA TCGA-L5-A4OQ 2 Out-of-Frame Intra-chr q21.2 q21.2 5271 ChimerSeq FusionScan TCGA_RNA-Seq ADNP-NFATC2 ADNP chr20 49545187 - NFATC2 chr20 50015267 - Exonic hg19 ESCA TCGA-L5-A4OQ 2 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.2 Tumor suppressor gene Transcription factor Seq+ 5272 ChimerSeq FusionScan TCGA_RNA-Seq SF3B3-DDX19B SF3B3 chr16 70573110 + DDX19B chr16 70348804 + Exonic hg19 ESCA TCGA-L5-A4OQ 2 Out-of-Frame Intra-chr q22.1 q22.1 Seq+ 5273 ChimerSeq FusionScan TCGA_RNA-Seq ADNP-NFATC2 ADNP chr20 49545187 - NFATC2 chr20 50007988 - Exonic hg19 ESCA TCGA-L5-A4OQ 2 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.2 Tumor suppressor gene Transcription factor Seq+ 5274 ChimerSeq FusionScan TCGA_RNA-Seq GPATCH1-TAF3 GPATCH1 chr19 33616108 + TAF3 chr10 8005882 + Exonic hg19 ESCA TCGA-L5-A4OQ 2 Out-of-Frame Inter-chr q13.11 p14 5275 ChimerSeq FusionScan TCGA_RNA-Seq NR2C2-PARL NR2C2 chr3 14989413 + PARL chr3 183585848 - Exonic hg19 ESCA TCGA-R6-A6Y2 14 5'UTR-CDS Intra-chr p25.1 Tumor suppressor gene Transcription factor q27.1 Seq+ 5276 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHM2-IGF2BP2 PLEKHM2 chr1 16046415 + IGF2BP2 chr3 185410550 - Exonic hg19 ESCA TCGA-R6-A6Y2 7 In-Frame Inter-chr p36.21 q27.2 Seq+ 5277 ChimerSeq FusionScan TCGA_RNA-Seq TAF15-ZNHIT3 TAF15 chr17 34136580 + ZNHIT3 chr17 34848656 + Exonic hg19 ESCA TCGA-R6-A6Y2 5 In-Frame Intra-chr q12 q12 Seq+ 5278 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB17-CROCC ZBTB17 chr1 16299533 - CROCC chr1 17263131 + Exonic hg19 ESCA TCGA-R6-A6Y2 3 5'UTR-CDS Intra-chr p36.13 Transcription factor p36.13 Seq+ 5279 ChimerSeq FusionScan TCGA_RNA-Seq FOXJ3-VSTM4 FOXJ3 chr1 42776720 - VSTM4 chr10 50272781 - Exonic hg19 ESCA TCGA-2H-A9GO 2 Out-of-Frame Inter-chr p34.2 Transcription factor q11.23 5280 ChimerSeq FusionScan TCGA_RNA-Seq SLC25A15-C11orf82 SLC25A15 chr13 41373451 + C11orf82 chr11 82625764 + Exonic hg19 ESCA TCGA-2H-A9GO 2 CDS-5'UTR Inter-chr q14.11 5281 ChimerSeq FusionScan TCGA_RNA-Seq PPP3R1-C1D PPP3R1 chr2 68479256 - C1D chr2 68274451 - Exonic hg19 ESCA TCGA-2H-A9GO 2 CDS-5'UTR Intra-chr p14 p14 Seq+ 5282 ChimerSeq FusionScan TCGA_RNA-Seq PARD3-SRSF11 PARD3 chr10 34558584 - SRSF11 chr1 70687297 + Exonic hg19 ESCA TCGA-2H-A9GO 2 CDS-5'UTR Inter-chr p11.21 p31.1 5283 ChimerSeq FusionScan TCGA_RNA-Seq VCL-ADK VCL chr10 75867112 + ADK chr10 76468078 + Exonic hg19 ESCA TCGA-VR-A8ET 11 Out-of-Frame Intra-chr q22.2 q22.2 Seq+ 5284 ChimerSeq FusionScan TCGA_RNA-Seq TBK1-RBM48 TBK1 chr12 64889555 + RBM48 chr7 92161717 + Exonic hg19 ESCA TCGA-VR-A8ET 6 Out-of-Frame Inter-chr q14.2 Other:IKK q21.2 Seq+ 5285 ChimerSeq FusionScan TCGA_RNA-Seq LYRM4-RPP40 LYRM4 chr6 5216850 - RPP40 chr6 5002479 - Exonic hg19 ESCA TCGA-VR-A8ET 6 In-Frame Intra-chr p25.1 p25.1 Seq+ 5286 ChimerSeq FusionScan TCGA_RNA-Seq YWHAB-STK4 YWHAB chr20 43514527 + STK4 chr20 43703658 + Exonic hg19 ESCA TCGA-VR-A8ET 5 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 5287 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-PHTF2 PTPN12 chr7 77221573 + PHTF2 chr7 77469537 + Exonic hg19 ESCA TCGA-VR-A8ET 5 CDS-5'UTR Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 5288 ChimerSeq FusionScan TCGA_RNA-Seq YWHAB-STK4 YWHAB chr20 43516383 + STK4 chr20 43703658 + Exonic hg19 ESCA TCGA-VR-A8ET 2 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 5289 ChimerSeq FusionScan TCGA_RNA-Seq VCL-ADK VCL chr10 75865111 + ADK chr10 76468078 + Exonic hg19 ESCA TCGA-VR-A8ET 2 In-Frame Intra-chr q22.2 q22.2 Seq+ 5290 ChimerSeq FusionScan TCGA_RNA-Seq FUT8-FNTB FUT8 chr14 65879932 + FNTB chr14 65479034 + Exonic hg19 ESCA TCGA-L5-A8NS 5 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 5291 ChimerSeq FusionScan TCGA_RNA-Seq DTX4-FAM111B DTX4 chr11 58967246 + FAM111B chr11 58891651 + Exonic hg19 ESCA TCGA-L5-A8NS 4 In-Frame Intra-chr q12.1 q12.1 Seq+ 5292 ChimerSeq FusionScan TCGA_RNA-Seq ARAP1-IL12RB2 ARAP1 chr11 72404369 - IL12RB2 chr1 67816552 + Exonic hg19 ESCA TCGA-L5-A8NS 4 In-Frame Inter-chr q13.4 p31.3 Seq+ 5293 ChimerSeq FusionScan TCGA_RNA-Seq BECN1-AP2B1 BECN1 chr17 40965965 - AP2B1 chr17 34036242 + Exonic hg19 ESCA TCGA-L5-A8NS 3 In-Frame Intra-chr q21.31 Tumor suppressor gene q12 Seq+ 5294 ChimerSeq FusionScan TCGA_RNA-Seq NF1-EVI2B NF1 chr17 29490394 + EVI2B chr17 29641130 - Exonic hg19 ESCA TCGA-L5-A8NS 2 CDS-5'UTR Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 5295 ChimerSeq FusionScan TCGA_RNA-Seq ARPC1B-BAIAP2L1 ARPC1B chr7 98972404 + BAIAP2L1 chr7 97944924 - Exonic hg19 ESCA TCGA-L5-A8NS 2 5'UTR-CDS Intra-chr q22.1 q22.1 5296 ChimerSeq FusionScan TCGA_RNA-Seq MAN1C1-TTC40 MAN1C1 chr1 26075826 + TTC40 chr10 134686328 - Exonic hg19 ESCA TCGA-L5-A8NS 2 In-Frame Inter-chr p36.11 Seq+ 5297 ChimerSeq FusionScan TCGA_RNA-Seq MSH2-EPCAM MSH2 chr2 47630541 + EPCAM chr2 47612304 + Exonic hg19 ESCA TCGA-L5-A8NI 46 Out-of-Frame Intra-chr p21 Oncogene Tumor suppressor gene p21 Seq+ 5298 ChimerSeq FusionScan TCGA_RNA-Seq PAPL-ACTN4 PAPL chr19 39576030 + ACTN4 chr19 39195573 + Exonic hg19 ESCA TCGA-L5-A8NI 41 In-Frame Intra-chr Seq+ 5299 ChimerSeq FusionScan TCGA_RNA-Seq IST1-DHX38 IST1 chr16 71929492 + DHX38 chr16 72130037 + Exonic hg19 ESCA TCGA-L5-A8NI 25 5'UTR-5'UTR Intra-chr q22.2 q22.2 Seq+ 5300 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD11-FANCA ANKRD11 chr16 89556652 - FANCA chr16 89818630 - Exonic hg19 ESCA TCGA-L5-A8NI 23 5'UTR-CDS Intra-chr q24.3 q24.3 Oncogene Seq+ 5301 ChimerSeq FusionScan TCGA_RNA-Seq KDM5A-NINJ2 KDM5A chr12 430160 - NINJ2 chr12 675344 - Exonic hg19 ESCA TCGA-L5-A8NI 21 In-Frame Intra-chr p13.33 Tumor suppressor gene p13.33 Seq+ 5302 ChimerSeq FusionScan TCGA_RNA-Seq FAM102A-C11orf30 FAM102A chr9 130742270 - C11orf30 chr11 76255302 + Exonic hg19 ESCA TCGA-L5-A8NI 20 Out-of-Frame Inter-chr q34.11 Seq+ 5303 ChimerSeq FusionScan TCGA_RNA-Seq CUX1-EMID2 CUX1 chr7 101559505 + EMID2 chr7 101176362 + Exonic hg19 ESCA TCGA-L5-A8NI 18 Out-of-Frame Intra-chr q22.1 Tumor suppressor gene Transcription factor Seq+ 5304 ChimerSeq FusionScan TCGA_RNA-Seq NIPBL-C5orf42 NIPBL chr5 36962376 + C5orf42 chr5 37115151 - Exonic hg19 ESCA TCGA-L5-A8NI 17 In-Frame Intra-chr p13.2 p13.2 Seq+ 5305 ChimerSeq FusionScan TCGA_RNA-Seq WNK2-SUSD3 WNK2 chr9 96031028 + SUSD3 chr9 95838065 + Exonic hg19 ESCA TCGA-L5-A8NI 14 In-Frame Intra-chr q22.31 Tumor suppressor gene q22.31 Seq+ 5306 ChimerSeq FusionScan TCGA_RNA-Seq RBM39-CPNE1 RBM39 chr20 34319862 - CPNE1 chr20 34220845 - Exonic hg19 ESCA TCGA-L5-A8NI 14 Out-of-Frame Intra-chr q11.22 q11.22 5307 ChimerSeq FusionScan TCGA_RNA-Seq DDB1-CPSF7 DDB1 chr11 61080970 - CPSF7 chr11 61183991 - Exonic hg19 ESCA TCGA-L5-A8NI 12 Out-of-Frame Intra-chr q12.2 q12.2 Seq+ 5308 ChimerSeq FusionScan TCGA_RNA-Seq ETHE1-PLAUR ETHE1 chr19 44030666 - PLAUR chr19 44159725 - Exonic hg19 ESCA TCGA-L5-A8NI 11 In-Frame Intra-chr q13.31 q13.31 Seq+ 5309 ChimerSeq FusionScan TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104681470 + LHFPL3 chr7 104546633 + Exonic hg19 ESCA TCGA-L5-A8NI 11 Out-of-Frame Intra-chr q22.2 Seq+ 5310 ChimerSeq FusionScan TCGA_RNA-Seq DGKD-SAG DGKD chr2 234299129 + SAG chr2 234243607 + Exonic hg19 ESCA TCGA-L5-A8NI 10 Out-of-Frame Intra-chr Seq+ 5311 ChimerSeq FusionScan TCGA_RNA-Seq ZNF292-SLC35A1 ZNF292 chr6 87865477 + SLC35A1 chr6 88210225 + Exonic hg19 ESCA TCGA-L5-A8NI 10 Out-of-Frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q15 Seq+ 5312 ChimerSeq FusionScan TCGA_RNA-Seq MAP4-CDC25A MAP4 chr3 48130262 - CDC25A chr3 48215947 - Exonic hg19 ESCA TCGA-L5-A8NI 10 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 5313 ChimerSeq FusionScan TCGA_RNA-Seq UNK-KIAA0195 UNK chr17 73781065 + KIAA0195 chr17 73467880 + Exonic hg19 ESCA TCGA-L5-A8NI 10 5'UTR-5'UTR Intra-chr q25.1 Seq+ 5314 ChimerSeq FusionScan TCGA_RNA-Seq RBM47-APBB2 RBM47 chr4 40631412 - APBB2 chr4 40832594 - Exonic hg19 ESCA TCGA-L5-A8NI 9 5'UTR-5'UTR Intra-chr p14 p13 Seq+ 5315 ChimerSeq FusionScan TCGA_RNA-Seq TRIM14-CORO2A TRIM14 chr9 100881263 - CORO2A chr9 100899970 - Exonic hg19 ESCA TCGA-L5-A8NI 9 In-Frame Intra-chr q22.33 q22.33 Seq+ 5316 ChimerSeq FusionScan TCGA_RNA-Seq RELB-ZNF227 RELB chr19 45532250 + ZNF227 chr19 44738854 + Exonic hg19 ESCA TCGA-L5-A8NI 9 Out-of-Frame Intra-chr q13.32 Transcription factor q13.31 Transcription factor Seq+ 5317 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R2A-MATR3 PPP2R2A chr8 26151256 + MATR3 chr5 138650363 + Exonic hg19 ESCA TCGA-L5-A8NI 8 Out-of-Frame Inter-chr p21.2 q31.2 Seq+ 5318 ChimerSeq FusionScan TCGA_RNA-Seq THRAP3-ARHGEF10L THRAP3 chr1 36690106 + ARHGEF10L chr1 17907047 + Exonic hg19 ESCA TCGA-L5-A8NI 8 5'UTR-5'UTR Intra-chr p34.3 p36.13 Seq+ 5319 ChimerSeq FusionScan TCGA_RNA-Seq SUV420H1-RNPS1 SUV420H1 chr11 67980604 - RNPS1 chr16 2305727 - Exonic hg19 ESCA TCGA-L5-A8NI 7 5'UTR-CDS Inter-chr p13.3 Seq+ 5320 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD11-FANCA ANKRD11 chr16 89556652 - FANCA chr16 89825113 - Exonic hg19 ESCA TCGA-L5-A8NI 7 5'UTR-CDS Intra-chr q24.3 q24.3 Oncogene Seq+ 5321 ChimerSeq FusionScan TCGA_RNA-Seq ZNF292-SLC35A1 ZNF292 chr6 87865477 + SLC35A1 chr6 88210875 + Exonic hg19 ESCA TCGA-L5-A8NI 6 In-Frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q15 Seq+ 5322 ChimerSeq FusionScan TCGA_RNA-Seq USF2-ZNF30 USF2 chr19 35760906 + ZNF30 chr19 35433497 + Exonic hg19 ESCA TCGA-L5-A8NI 6 CDS-5'UTR Intra-chr q13.12 Transcription factor q13.11 Transcription factor Seq+ 5323 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1671-CNIH3 KIAA1671 chr22 25445331 + CNIH3 chr1 224868659 + Exonic hg19 ESCA TCGA-L5-A8NI 6 In-Frame Inter-chr q11.23 q42.12 Seq+ 5324 ChimerSeq FusionScan TCGA_RNA-Seq GOLPH3-IKZF3 GOLPH3 chr5 32173915 - IKZF3 chr17 37922746 - Exonic hg19 ESCA TCGA-L5-A8NI 5 Out-of-Frame Inter-chr p13.3 q21.1 Tumor suppressor gene Transcription factor Seq+ 5325 ChimerSeq FusionScan TCGA_RNA-Seq GOLPH3-IKZF3 GOLPH3 chr5 32173915 - IKZF3 chr17 37934020 - Exonic hg19 ESCA TCGA-L5-A8NI 5 Out-of-Frame Inter-chr p13.3 q21.1 Tumor suppressor gene Transcription factor Seq+ 5326 ChimerSeq FusionScan TCGA_RNA-Seq PLA2G6-TPTE2 PLA2G6 chr22 38541444 - TPTE2 chr13 20067641 - Exonic hg19 ESCA TCGA-L5-A8NI 4 In-Frame Inter-chr q13.1 q12.11 Tumor suppressor gene 5327 ChimerSeq FusionScan TCGA_RNA-Seq NISCH-DNAH1 NISCH chr3 52492860 + DNAH1 chr3 52413920 + Exonic hg19 ESCA TCGA-L5-A8NI 4 In-Frame Intra-chr p21.1 p21.1 Seq+ 5328 ChimerSeq FusionScan TCGA_RNA-Seq USF2-ZNF30 USF2 chr19 35760602 + ZNF30 chr19 35433497 + Exonic hg19 ESCA TCGA-L5-A8NI 4 CDS-5'UTR Intra-chr q13.12 Transcription factor q13.11 Transcription factor Seq+ 5329 ChimerSeq FusionScan TCGA_RNA-Seq SMG5-CCT3 SMG5 chr1 156230241 - CCT3 chr1 156290816 - Exonic hg19 ESCA TCGA-L5-A8NI 4 Out-of-Frame Intra-chr q22 q22 Seq+ 5330 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D14-MRFAP1 TBC1D14 chr4 6925838 + MRFAP1 chr4 6643456 + Exonic hg19 ESCA TCGA-L5-A8NI 4 CDS-3'UTR Intra-chr p16.1 p16.1 Seq+ 5331 ChimerSeq FusionScan TCGA_RNA-Seq ERC1-WNK1 ERC1 chr12 1213990 + WNK1 chr12 987377 + Exonic hg19 ESCA TCGA-L5-A8NI 4 In-Frame Intra-chr p13.33 Seq+ 5332 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-SND1 MLL3 chr7 152132710 - SND1 chr7 127447537 + Exonic hg19 ESCA TCGA-L5-A8NI 3 Out-of-Frame Intra-chr Tumor suppressor gene q32.1 Seq+ 5333 ChimerSeq FusionScan TCGA_RNA-Seq EFHA1-CD101 EFHA1 chr13 22140935 - CD101 chr1 117552471 + Exonic hg19 ESCA TCGA-L5-A8NI 3 In-Frame Inter-chr p13.1 Seq+ 5334 ChimerSeq FusionScan TCGA_RNA-Seq GPR160-LRRIQ4 GPR160 chr3 169797685 + LRRIQ4 chr3 169555266 + Exonic hg19 ESCA TCGA-L5-A8NI 3 5'UTR-CDS Intra-chr q26.2 q26.2 5335 ChimerSeq FusionScan TCGA_RNA-Seq IKBKAP-PTPN3 IKBKAP chr9 111673289 - PTPN3 chr9 112153841 - Exonic hg19 ESCA TCGA-L5-A8NI 3 Out-of-Frame Intra-chr q31.3 q31.3 5336 ChimerSeq FusionScan TCGA_RNA-Seq SND1-MLL3 SND1 chr7 127292505 + MLL3 chr7 152055760 - Exonic hg19 ESCA TCGA-L5-A8NI 3 Out-of-Frame Intra-chr q32.1 Tumor suppressor gene 5337 ChimerSeq FusionScan TCGA_RNA-Seq SPRED1-C15orf39 SPRED1 chr15 38591748 + C15orf39 chr15 75498339 + Exonic hg19 ESCA TCGA-L5-A8NI 3 CDS-5'UTR Intra-chr q14 q24.2 5338 ChimerSeq FusionScan TCGA_RNA-Seq CCDC169-FAM176C CCDC169 chr13 36857605 - FAM176C chr21 33873724 + Exonic hg19 ESCA TCGA-L5-A8NI 2 Out-of-Frame Inter-chr q13.3 5339 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1671-CNIH3 KIAA1671 chr22 25445331 + CNIH3 chr1 224918163 + Exonic hg19 ESCA TCGA-L5-A8NI 2 In-Frame Inter-chr q11.23 q42.12 Seq+ 5340 ChimerSeq FusionScan TCGA_RNA-Seq OXR1-ASAP1 OXR1 chr8 107371864 + ASAP1 chr8 131104389 - Exonic hg19 ESCA TCGA-L5-A8NI 2 Out-of-Frame Intra-chr q23.1 q24.22 5341 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD11-FANCA ANKRD11 chr16 89497663 - FANCA chr16 89818630 - Exonic hg19 ESCA TCGA-L5-A8NI 2 5'UTR-CDS Intra-chr q24.3 q24.3 Oncogene Seq+ 5342 ChimerSeq FusionScan TCGA_RNA-Seq ERO1L-TXNDC16 ERO1L chr14 53133092 - TXNDC16 chr14 52922180 - Exonic hg19 ESCA TCGA-L5-A8NI 2 In-Frame Intra-chr q22.1 Seq+ 5343 ChimerSeq FusionScan TCGA_RNA-Seq UBE2Q2-SNX33 UBE2Q2 chr15 76136187 + SNX33 chr15 75949302 + Exonic hg19 ESCA TCGA-L5-A8NI 2 Out-of-Frame Intra-chr q24.2 q24.2 5344 ChimerSeq FusionScan TCGA_RNA-Seq APOO-MTERF APOO chrX 23886709 - MTERF chr7 91504078 - Exonic hg19 ESCA TCGA-L5-A8NI 2 Out-of-Frame Inter-chr p22.11 5345 ChimerSeq FusionScan TCGA_RNA-Seq QRICH1-USP4 QRICH1 chr3 49094294 - USP4 chr3 49315884 - Exonic hg19 ESCA TCGA-L5-A8NI 2 In-Frame Intra-chr p21.31 p21.31 Seq+ 5346 ChimerSeq FusionScan TCGA_RNA-Seq RNF123-CROCC RNF123 chr3 49728680 + CROCC chr1 17263131 + Exonic hg19 ESCA TCGA-L5-A8NI 2 Out-of-Frame Inter-chr p21.31 p36.13 5347 ChimerSeq FusionScan TCGA_RNA-Seq SHROOM3-LUC7L SHROOM3 chr4 77476916 + LUC7L chr16 258187 - Exonic hg19 ESCA TCGA-L5-A8NI 2 Out-of-Frame Inter-chr q21.1 p13.3 Seq+ 5348 ChimerSeq FusionScan TCGA_RNA-Seq PGM2L1-CHRDL2 PGM2L1 chr11 74109095 - CHRDL2 chr11 74429877 - Exonic hg19 ESCA TCGA-L5-A8NI 2 Out-of-Frame Intra-chr q13.4 q13.4 Seq+ 5349 ChimerSeq FusionScan TCGA_RNA-Seq USF2-ZNF30 USF2 chr19 35760602 + ZNF30 chr19 35434126 + Exonic hg19 ESCA TCGA-L5-A8NI 2 Out-of-Frame Intra-chr q13.12 Transcription factor q13.11 Transcription factor Seq+ 5350 ChimerSeq FusionScan TCGA_RNA-Seq CLASRP-ZNF317 CLASRP chr19 45543569 + ZNF317 chr19 9266600 + Exonic hg19 ESCA TCGA-L5-A8NI 2 CDS-5'UTR Intra-chr q13.32 p13.2 Transcription factor 5351 ChimerSeq FusionScan TCGA_RNA-Seq SQSTM1-CDKN1C SQSTM1 chr5 179251323 + CDKN1C chr11 2905364 - Exonic hg19 ESCA TCGA-L5-A8NI 2 In-Frame Inter-chr q35.3 Tumor suppressor gene 5352 ChimerSeq FusionScan TCGA_RNA-Seq KDM2A-CD47 KDM2A chr11 66888829 + CD47 chr3 107766139 - Exonic hg19 ESCA TCGA-L5-A8NI 2 In-Frame Inter-chr q13.2 Transcription factor q13.12 5353 ChimerSeq FusionScan TCGA_RNA-Seq PACSIN2-OSBPL9 PACSIN2 chr22 43272142 - OSBPL9 chr1 52249586 + Exonic hg19 ESCA TCGA-L5-A8NI 2 In-Frame Inter-chr q13.2 p32.3 5354 ChimerSeq FusionScan TCGA_RNA-Seq TRAPPC10-AGPAT3 TRAPPC10 chr21 45432441 + AGPAT3 chr21 45402184 + Exonic hg19 ESCA TCGA-L5-A8NI 2 In-Frame Intra-chr q22.3 q22.3 Seq+ 5355 ChimerSeq FusionScan TCGA_RNA-Seq DHX8-TRPM7 DHX8 chr17 41585888 + TRPM7 chr15 50906460 - Exonic hg19 ESCA TCGA-L5-A8NI 2 In-Frame Inter-chr q21.31 q21.2 5356 ChimerSeq FusionScan TCGA_RNA-Seq NISCH-DNAH1 NISCH chr3 52492860 + DNAH1 chr3 52415655 + Exonic hg19 ESCA TCGA-L5-A8NI 2 In-Frame Intra-chr p21.1 p21.1 Seq+ 5357 ChimerSeq FusionScan TCGA_RNA-Seq KDELR2-ZNF12 KDELR2 chr7 6523597 - ZNF12 chr7 6744854 - Exonic hg19 ESCA TCGA-L5-A8NI 2 CDS-5'UTR Intra-chr p22.1 p22.1 Transcription factor 5358 ChimerSeq FusionScan TCGA_RNA-Seq C5orf42-NIPBL C5orf42 chr5 37138821 - NIPBL chr5 36995723 + Exonic hg19 ESCA TCGA-L5-A8NI 2 Out-of-Frame Intra-chr p13.2 p13.2 5359 ChimerSeq FusionScan TCGA_RNA-Seq IGF2R-DYNLT1 IGF2R chr6 160511135 + DYNLT1 chr6 159062392 - Exonic hg19 ESCA TCGA-L5-A8NI 2 Out-of-Frame Intra-chr q25.3 Oncogene Tumor suppressor gene q25.3 5360 ChimerSeq FusionScan TCGA_RNA-Seq ETHE1-PLAUR ETHE1 chr19 44030666 - PLAUR chr19 44156523 - Exonic hg19 ESCA TCGA-L5-A8NI 2 In-Frame Intra-chr q13.31 q13.31 Seq+ 5361 ChimerSeq FusionScan TCGA_RNA-Seq AGSK1-CPEB1 AGSK1 chr15 83182643 - CPEB1 chr15 83240282 - Exonic hg19 ESCA TCGA-L5-A8NI 2 3'UTR-CDS Intra-chr q25.2 Transcription factor 5362 ChimerSeq FusionScan TCGA_RNA-Seq STK3-NIPAL2 STK3 chr8 99538969 - NIPAL2 chr8 99266315 - Exonic hg19 ESCA TCGA-IC-A6RE 5 In-Frame Intra-chr q22.2 q22.2 Seq+ 5363 ChimerSeq FusionScan TCGA_RNA-Seq CASP7-TRUB1 CASP7 chr10 115457362 + TRUB1 chr10 116702403 + Exonic hg19 ESCA TCGA-IC-A6RE 4 Out-of-Frame Intra-chr q25.3 q25.3 Seq+ 5364 ChimerSeq FusionScan TCGA_RNA-Seq RELB-CLPTM1 RELB chr19 45532250 + CLPTM1 chr19 45476343 + Exonic hg19 ESCA TCGA-IC-A6RE 3 Out-of-Frame Intra-chr q13.32 Transcription factor q13.32 5365 ChimerSeq FusionScan TCGA_RNA-Seq ERMP1-UHRF2 ERMP1 chr9 5797816 - UHRF2 chr9 6420911 + Exonic hg19 ESCA TCGA-IC-A6RE 2 Out-of-Frame Intra-chr p24.1 p24.1 Tumor suppressor gene 5366 ChimerSeq FusionScan TCGA_RNA-Seq SEC61A2-CDC123 SEC61A2 chr10 12191960 + CDC123 chr10 12277046 + Exonic hg19 ESCA TCGA-LN-A49L 27 In-Frame Intra-chr p14 p14 5367 ChimerSeq FusionScan TCGA_RNA-Seq LRFN3-FXYD7 LRFN3 chr19 36428457 + FXYD7 chr19 35639596 + Exonic hg19 ESCA TCGA-LN-A49L 27 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 5368 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-RHBDD2 PTPN12 chr7 77166962 + RHBDD2 chr7 75510682 + Exonic hg19 ESCA TCGA-LN-A49L 21 CDS-5'UTR Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 5369 ChimerSeq FusionScan TCGA_RNA-Seq BRCC3-FAM50A BRCC3 chrX 154306978 + FAM50A chrX 153673980 + Exonic hg19 ESCA TCGA-LN-A49L 15 Out-of-Frame Intra-chr q28 q28 Seq+ 5370 ChimerSeq FusionScan TCGA_RNA-Seq PSMD5-CDK5RAP2 PSMD5 chr9 123593608 - CDK5RAP2 chr9 123308068 - Exonic hg19 ESCA TCGA-LN-A49L 9 In-Frame Intra-chr q33.2 q33.2 Seq+ 5371 ChimerSeq FusionScan TCGA_RNA-Seq CHD7-KAT6A CHD7 chr8 61591641 + KAT6A chr8 41845081 - Exonic hg19 ESCA TCGA-LN-A49L 9 5'UTR-CDS Intra-chr q12.2 p11.21 Oncogene Seq+ 5372 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-RHBDD2 PTPN12 chr7 77166962 + RHBDD2 chr7 75511146 + Exonic hg19 ESCA TCGA-LN-A49L 8 Out-of-Frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 5373 ChimerSeq FusionScan TCGA_RNA-Seq CAMK1D-ECHDC3 CAMK1D chr10 12391909 + ECHDC3 chr10 11789347 + Exonic hg19 ESCA TCGA-LN-A49L 8 In-Frame Intra-chr p13 p14 Seq+ 5374 ChimerSeq FusionScan TCGA_RNA-Seq C16orf70-DNAAF1 C16orf70 chr16 67144142 + DNAAF1 chr16 84193279 + Exonic hg19 ESCA TCGA-LN-A49L 8 Out-of-Frame Intra-chr q22.1 q24.1 Seq+ 5375 ChimerSeq FusionScan TCGA_RNA-Seq N4BP1-ABCC12 N4BP1 chr16 48594664 - ABCC12 chr16 48167746 - Exonic hg19 ESCA TCGA-LN-A49L 6 Out-of-Frame Intra-chr q12.1 q12.1 Seq+ 5376 ChimerSeq FusionScan TCGA_RNA-Seq STAG1-MSL2 STAG1 chr3 136471036 - MSL2 chr3 135871580 - Exonic hg19 ESCA TCGA-LN-A49L 4 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 5377 ChimerSeq FusionScan TCGA_RNA-Seq ATAD1-PTEN ATAD1 chr10 89574194 - PTEN chr10 89685269 + Exonic hg19 ESCA TCGA-LN-A49L 4 Out-of-Frame Intra-chr q23.31 Oncogene Tumor suppressor gene Seq+ 5378 ChimerSeq FusionScan TCGA_RNA-Seq CRHR1-KANSL1 CRHR1 chr17 43699407 + KANSL1 chr17 44172067 - Exonic hg19 ESCA TCGA-LN-A49L 3 5'UTR-CDS Intra-chr q21.31 Pub 5379 ChimerSeq FusionScan TCGA_RNA-Seq UBR5-ATP5C1 UBR5 chr8 103372298 - ATP5C1 chr10 7848936 + Exonic hg19 ESCA TCGA-LN-A49L 2 In-Frame Inter-chr q22.3 Oncogene p14 5380 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC9-CDC42EP1 DNAJC9 chr10 75003600 - CDC42EP1 chr22 37962078 + Exonic hg19 ESCA TCGA-LN-A49L 2 CDS-5'UTR Inter-chr q22.2 q13.1 5381 ChimerSeq FusionScan TCGA_RNA-Seq ADD1-GRK4 ADD1 chr4 2916767 + GRK4 chr4 3021367 + Exonic hg19 ESCA TCGA-LN-A49L 2 Out-of-Frame Intra-chr p16.3 p16.3 5382 ChimerSeq FusionScan TCGA_RNA-Seq TAPBPL-CD9 TAPBPL chr12 6562882 + CD9 chr12 6344394 + Exonic hg19 ESCA TCGA-LN-A49L 2 Out-of-Frame Intra-chr p13.31 p13.31 5383 ChimerSeq FusionScan TCGA_RNA-Seq FAM171A1-NMT2 FAM171A1 chr10 15412954 - NMT2 chr10 15183556 - Exonic hg19 ESCA TCGA-LN-A49L 2 Out-of-Frame Intra-chr p13 p13 5384 ChimerSeq FusionScan TCGA_RNA-Seq NPC2-KIAA0317 NPC2 chr14 74959895 - KIAA0317 chr14 75143455 - Exonic hg19 ESCA TCGA-LN-A9FP 3 In-Frame Intra-chr q24.3 5385 ChimerSeq FusionScan TCGA_RNA-Seq MICA-RIPK1 MICA chr6 31368539 + RIPK1 chr6 3104458 + Exonic hg19 ESCA TCGA-LN-A9FP 2 3'UTR-CDS Intra-chr p21.33 p25.2 TKL:RIPK 5386 ChimerSeq FusionScan TCGA_RNA-Seq ELAVL1-BSG ELAVL1 chr19 8045966 - BSG chr19 580378 + Exonic hg19 ESCA TCGA-L5-A8NV 2 Out-of-Frame Intra-chr p13.2 p13.3 5387 ChimerSeq FusionScan TCGA_RNA-Seq MAP2K4-DNAH9 MAP2K4 chr17 11924318 + DNAH9 chr17 11827130 + Exonic hg19 ESCA TCGA-L5-A8NV 2 In-Frame Intra-chr p12 STE:STE7 Oncogene Tumor suppressor gene p12 Seq+ 5388 ChimerSeq FusionScan TCGA_RNA-Seq MRPL1-FAM190A MRPL1 chr4 78830526 + FAM190A chr4 92007100 + Exonic hg19 ESCA TCGA-LN-A49X 3 In-Frame Intra-chr q21.1 5389 ChimerSeq FusionScan TCGA_RNA-Seq ADORA2B-TTC19 ADORA2B chr17 15848897 + TTC19 chr17 15905228 + Exonic hg19 ESCA TCGA-LN-A49X 2 Out-of-Frame Intra-chr p12 p12 5390 ChimerSeq FusionScan TCGA_RNA-Seq PGLYRP3-SPRR2G PGLYRP3 chr1 153271588 - SPRR2G chr1 153122607 - Exonic hg19 ESCA TCGA-VR-A8EZ 2 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 5391 ChimerSeq FusionScan TCGA_RNA-Seq APPL1-ASB14 APPL1 chr3 57291079 + ASB14 chr3 57303646 - Exonic hg19 ESCA TCGA-VR-A8EZ 2 CDS-3'UTR Intra-chr p14.3 p14.3 5392 ChimerSeq FusionScan TCGA_RNA-Seq BBS9-FKBP9 BBS9 chr7 33427756 + FKBP9 chr7 33035774 + Exonic hg19 ESCA TCGA-VR-A8EZ 2 Out-of-Frame Intra-chr p14.3 p14.3 5393 ChimerSeq FusionScan TCGA_RNA-Seq NUP62-ATF5 NUP62 chr19 50432582 - ATF5 chr19 50435678 + Exonic hg19 ESCA TCGA-VR-A8EZ 2 5'UTR-CDS Intra-chr q13.33 q13.33 Transcription factor Seq+ 5394 ChimerSeq FusionScan TCGA_RNA-Seq GNPAT-C1orf131 GNPAT chr1 231377202 + C1orf131 chr1 231364955 - Exonic hg19 ESCA TCGA-L7-A6VZ 2 In-Frame Intra-chr q42.2 q42.2 5395 ChimerSeq FusionScan TCGA_RNA-Seq NAA25-KIF20A NAA25 chr12 112546519 - KIF20A chr5 137520200 + Exonic hg19 ESCA TCGA-L7-A6VZ 2 Out-of-Frame Inter-chr q24.13 q31.2 5396 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D12-CYP2C18 TBC1D12 chr10 96256929 + CYP2C18 chr10 96447526 + Exonic hg19 ESCA TCGA-L7-A6VZ 2 Out-of-Frame Intra-chr q23.33 q23.33 Seq+ 5397 ChimerSeq FusionScan TCGA_RNA-Seq SEMA4B-ARID1B SEMA4B chr15 90744967 + ARID1B chr6 157495141 + Exonic hg19 ESCA TCGA-L7-A6VZ 2 In-Frame Inter-chr q26.1 q25.3 Oncogene 5398 ChimerSeq FusionScan TCGA_RNA-Seq TRIM29-RHCG TRIM29 chr11 119998043 - RHCG chr15 90021205 - Exonic hg19 ESCA TCGA-L5-A8NW 2 In-Frame Inter-chr q23.3 q26.1 5399 ChimerSeq FusionScan TCGA_RNA-Seq TMTC4-PCCA TMTC4 chr13 101315217 - PCCA chr13 101179928 + Exonic hg19 ESCA TCGA-L5-A8NW 2 In-Frame Intra-chr q32.3 q32.3 5400 ChimerSeq FusionScan TCGA_RNA-Seq SRD5A1-GRK4 SRD5A1 chr5 6663079 + GRK4 chr4 3024140 + Exonic hg19 ESCA TCGA-L5-A8NW 2 3'UTR-CDS Inter-chr p15.31 p16.3 5401 ChimerSeq FusionScan TCGA_RNA-Seq RGS12-SH3KBP1 RGS12 chr4 3372048 + SH3KBP1 chrX 19725102 - Exonic hg19 ESCA TCGA-L5-A8NW 2 Out-of-Frame Inter-chr p16.3 p22.12 5402 ChimerSeq FusionScan TCGA_RNA-Seq PCM1-HMBOX1 PCM1 chr8 17851128 + HMBOX1 chr8 28866588 + Exonic hg19 ESCA TCGA-L5-A8NW 2 Out-of-Frame Intra-chr p22 p21.1 Transcription factor 5403 ChimerSeq FusionScan TCGA_RNA-Seq DSG3-DSC3 DSG3 chr18 29027888 + DSC3 chr18 28588491 - Exonic hg19 ESCA TCGA-L5-A8NW 2 In-Frame Intra-chr q12.1 q12.1 Tumor suppressor gene 5404 ChimerSeq FusionScan TCGA_RNA-Seq CDK8-ATP8A2 CDK8 chr13 26928017 + ATP8A2 chr13 26402255 + Exonic hg19 ESCA TCGA-L5-A8NW 2 In-Frame Intra-chr q12.13 CMGC:CDK Oncogene q12.13 Seq+ 5405 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 ESCA TCGA-L5-A8NW 2 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 5406 ChimerSeq FusionScan TCGA_RNA-Seq IP6K1-FAM208A IP6K1 chr3 49785250 - FAM208A chr3 56707753 - Exonic hg19 ESCA TCGA-L5-A8NW 2 In-Frame Intra-chr p21.31 p14.3 5407 ChimerSeq FusionScan TCGA_RNA-Seq PTPN14-APLP2 PTPN14 chr1 214585026 - APLP2 chr11 129996594 + Exonic hg19 ESCA TCGA-L5-A4OH 2 Out-of-Frame Inter-chr q41 q24.3 5408 ChimerSeq FusionScan TCGA_RNA-Seq EXD3-CPSF7 EXD3 chr9 140289754 - CPSF7 chr11 61196762 - Exonic hg19 ESCA TCGA-L5-A4OH 2 Out-of-Frame Inter-chr q34.3 q12.2 5409 ChimerSeq FusionScan TCGA_RNA-Seq RBM14-ARHGAP32 RBM14 chr11 66384528 + ARHGAP32 chr11 128994789 - Exonic hg19 ESCA TCGA-LN-A4MR 3 Out-of-Frame Intra-chr q13.2 Tumor suppressor gene q24.3 5410 ChimerSeq FusionScan TCGA_RNA-Seq PERP-B3GNT5 PERP chr6 138428263 - B3GNT5 chr3 182987285 + Exonic hg19 ESCA TCGA-LN-A4MR 2 CDS-5'UTR Inter-chr q23.3 q27.1 5411 ChimerSeq FusionScan TCGA_RNA-Seq DENND5A-TMEM9B DENND5A chr11 9286507 - TMEM9B chr11 8970022 - Exonic hg19 ESCA TCGA-LN-A4MR 2 Out-of-Frame Intra-chr p15.4 p15.4 5412 ChimerSeq FusionScan TCGA_RNA-Seq RUSC2-UBE2R2 RUSC2 chr9 35490169 + UBE2R2 chr9 33886878 + Exonic hg19 ESCA TCGA-LN-A4MR 2 5'UTR-CDS Intra-chr p13.3 p13.3 5413 ChimerSeq FusionScan TCGA_RNA-Seq EFTUD2-GNL2 EFTUD2 chr17 42956923 - GNL2 chr1 38042157 - Exonic hg19 ESCA TCGA-LN-A4MR 2 In-Frame Inter-chr q21.31 p34.3 5414 ChimerSeq FusionScan TCGA_RNA-Seq CAMK2B-ICT1 CAMK2B chr7 44302603 - ICT1 chr17 73015794 + Exonic hg19 ESCA TCGA-LN-A4MR 2 In-Frame Inter-chr p13 5415 ChimerSeq FusionScan TCGA_RNA-Seq LHFP-GSDMB LHFP chr13 40174968 - GSDMB chr17 38062524 - Exonic hg19 ESCA TCGA-LN-A4MR 2 In-Frame Inter-chr q14.11 q21.1 5416 ChimerSeq FusionScan TCGA_RNA-Seq PIK3C2A-ITGAV PIK3C2A chr11 17172044 - ITGAV chr2 187540330 + Exonic hg19 ESCA TCGA-LN-A4MR 2 Out-of-Frame Inter-chr p15.1 q32.1 Tumor suppressor gene 5417 ChimerSeq FusionScan TCGA_RNA-Seq PUM1-YARS PUM1 chr1 31532050 - YARS chr1 33276658 - Exonic hg19 ESCA TCGA-JY-A6FH 14 In-Frame Intra-chr p35.2 p35.1 Seq+ 5418 ChimerSeq FusionScan TCGA_RNA-Seq TAX1BP1-CHN2 TAX1BP1 chr7 27827222 + CHN2 chr7 29394240 + Exonic hg19 ESCA TCGA-JY-A6FH 13 Out-of-Frame Intra-chr p15.2 p14.3 Seq+ 5419 ChimerSeq FusionScan TCGA_RNA-Seq U2AF2-KIR3DL2 U2AF2 chr19 56170711 + KIR3DL2 chr19 55363452 + Exonic hg19 ESCA TCGA-JY-A6FH 12 Out-of-Frame Intra-chr q13.42 Seq+ 5420 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R13B-L2HGDH PPP1R13B chr14 104313635 - L2HGDH chr14 50750751 - Exonic hg19 ESCA TCGA-JY-A6FH 9 In-Frame Intra-chr q32.33 q21.3 Seq+ 5421 ChimerSeq FusionScan TCGA_RNA-Seq U2AF2-KIR3DL1 U2AF2 chr19 56170711 + KIR3DL1 chr19 55329769 + Exonic hg19 ESCA TCGA-JY-A6FH 8 Out-of-Frame Intra-chr q13.42 Seq+ 5422 ChimerSeq FusionScan TCGA_RNA-Seq CYB561D2-SLC38A3 CYB561D2 chr3 50389477 + SLC38A3 chr3 50251581 + Exonic hg19 ESCA TCGA-JY-A6FH 8 CDS-5'UTR Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 5423 ChimerSeq FusionScan TCGA_RNA-Seq URI1-PDCD5 URI1 chr19 30462134 + PDCD5 chr19 33073100 + Exonic hg19 ESCA TCGA-JY-A6FH 7 Out-of-Frame Intra-chr q12 q13.11 Tumor suppressor gene Seq+ 5424 ChimerSeq FusionScan TCGA_RNA-Seq DRAM1-SYCP3 DRAM1 chr12 102271698 + SYCP3 chr12 102128822 - Exonic hg19 ESCA TCGA-JY-A6FH 6 Out-of-Frame Intra-chr q23.2 q23.2 Seq+ 5425 ChimerSeq FusionScan TCGA_RNA-Seq URI1-PDCD5 URI1 chr19 30433571 + PDCD5 chr19 33073100 + Exonic hg19 ESCA TCGA-JY-A6FH 6 In-Frame Intra-chr q12 q13.11 Tumor suppressor gene Seq+ 5426 ChimerSeq FusionScan TCGA_RNA-Seq AFAP1L2-GLUD1 AFAP1L2 chr10 116164198 - GLUD1 chr10 88835780 - Exonic hg19 ESCA TCGA-JY-A6FH 5 In-Frame Intra-chr q25.3 Tumor suppressor gene q23.2 5427 ChimerSeq FusionScan TCGA_RNA-Seq IQGAP1-NGRN IQGAP1 chr15 90934105 + NGRN chr15 90814419 + Exonic hg19 ESCA TCGA-JY-A6FH 4 In-Frame Intra-chr q26.1 q26.1 Seq+ 5428 ChimerSeq FusionScan TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105561039 - OBFC1 chr10 105677414 - Exonic hg19 ESCA TCGA-JY-A6FH 4 CDS-5'UTR Intra-chr q24.33 Seq+ 5429 ChimerSeq FusionScan TCGA_RNA-Seq CYB561D2-SLC38A3 CYB561D2 chr3 50388991 + SLC38A3 chr3 50251581 + Exonic hg19 ESCA TCGA-JY-A6FH 4 CDS-5'UTR Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 5430 ChimerSeq FusionScan TCGA_RNA-Seq SLC16A9-CCDC6 SLC16A9 chr10 61469236 - CCDC6 chr10 61552869 - Exonic hg19 ESCA TCGA-JY-A6FH 3 5'UTR-CDS Intra-chr q21.2 q21.2 Seq+ 5431 ChimerSeq FusionScan TCGA_RNA-Seq COBRA1-FBXW5 COBRA1 chr9 140161798 + FBXW5 chr9 139836136 - Exonic hg19 ESCA TCGA-JY-A6FH 3 In-Frame Intra-chr q34.3 Seq+ 5432 ChimerSeq FusionScan TCGA_RNA-Seq CRHR1-KANSL1 CRHR1 chr17 43699407 + KANSL1 chr17 44172067 - Exonic hg19 ESCA TCGA-JY-A6FH 2 5'UTR-CDS Intra-chr q21.31 Pub 5433 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHG5-KHDRBS1 PLEKHG5 chr1 6579504 - KHDRBS1 chr1 32495898 + Exonic hg19 ESCA TCGA-JY-A6FH 2 In-Frame Intra-chr p36.31 Oncogene p35.2 Seq+ 5434 ChimerSeq FusionScan TCGA_RNA-Seq DIS3L2-SPATA3 DIS3L2 chr2 233075115 + SPATA3 chr2 231865080 + Exonic hg19 ESCA TCGA-JY-A6FH 2 In-Frame Intra-chr q37.1 q37.1 5435 ChimerSeq FusionScan TCGA_RNA-Seq ITGA7-RNF41 ITGA7 chr12 56091478 - RNF41 chr12 56610397 - Exonic hg19 ESCA TCGA-JY-A6FH 2 CDS-5'UTR Intra-chr q13.2 Tumor suppressor gene q13.3 5436 ChimerSeq FusionScan TCGA_RNA-Seq YARS-ZMYND8 YARS chr1 33252540 - ZMYND8 chr20 45976670 - Exonic hg19 ESCA TCGA-JY-A6FH 2 Out-of-Frame Inter-chr p35.1 q13.12 5437 ChimerSeq FusionScan TCGA_RNA-Seq RERE-GNB1 RERE chr1 8716031 - GNB1 chr1 1770677 - Exonic hg19 ESCA TCGA-JY-A6FH 2 CDS-5'UTR Intra-chr p36.23 p36.33 5438 ChimerSeq FusionScan TCGA_RNA-Seq C10orf76-LDB1 C10orf76 chr10 103699619 - LDB1 chr10 103871293 - Exonic hg19 ESCA TCGA-JY-A6FH 2 Out-of-Frame Intra-chr q24.32 q24.32 Seq+ 5439 ChimerSeq FusionScan TCGA_RNA-Seq TBCD-CCDC57 TBCD chr17 80772810 + CCDC57 chr17 80059742 - Exonic hg19 ESCA TCGA-L5-A4OW 17 In-Frame Intra-chr q25.3 Seq+ 5440 ChimerSeq FusionScan TCGA_RNA-Seq PGS1-BPTF PGS1 chr17 76400170 + BPTF chr17 65916130 + Exonic hg19 ESCA TCGA-L5-A4OW 16 In-Frame Intra-chr q25.3 q24.2 Transcription factor Seq+ 5441 ChimerSeq FusionScan TCGA_RNA-Seq STAT3-NOS2 STAT3 chr17 40540296 - NOS2 chr17 26116714 - Exonic hg19 ESCA TCGA-L5-A4OW 10 5'UTR-CDS Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q11.2 Seq+ 5442 ChimerSeq FusionScan TCGA_RNA-Seq JUP-TTLL6 JUP chr17 39925220 - TTLL6 chr17 46865361 - Exonic hg19 ESCA TCGA-L5-A4OW 9 In-Frame Intra-chr q21.2 Tumor suppressor gene q21.32 Seq+ 5443 ChimerSeq FusionScan TCGA_RNA-Seq CERS6-NOSTRIN CERS6 chr2 169404211 + NOSTRIN chr2 169707593 + Exonic hg19 ESCA TCGA-L5-A4OW 8 In-Frame Intra-chr q24.3 Seq+ 5444 ChimerSeq FusionScan TCGA_RNA-Seq SEPT9-BAIAP2 SEPT9 chr17 75303279 + BAIAP2 chr17 79089569 + Exonic hg19 ESCA TCGA-L5-A4OW 8 Out-of-Frame Intra-chr q25.3 Seq+ 5445 ChimerSeq FusionScan TCGA_RNA-Seq ETV4-TCAP ETV4 chr17 41610041 - TCAP chr17 37821968 + Exonic hg19 ESCA TCGA-L5-A4OW 7 Out-of-Frame Intra-chr q21.31 Oncogene Transcription factor q12 Seq+ 5446 ChimerSeq FusionScan TCGA_RNA-Seq KRIT1-CDK6 KRIT1 chr7 91871347 - CDK6 chr7 92247521 - Exonic hg19 ESCA TCGA-L5-A4OW 6 Out-of-Frame Intra-chr q21.2 Tumor suppressor gene q21.2 CMGC:CDK Oncogene Tumor suppressor gene Seq+ 5447 ChimerSeq FusionScan TCGA_RNA-Seq TTLL6-NOS2 TTLL6 chr17 46862284 - NOS2 chr17 26116714 - Exonic hg19 ESCA TCGA-L5-A4OW 5 Out-of-Frame Intra-chr q21.32 q11.2 Seq+ 5448 ChimerSeq FusionScan TCGA_RNA-Seq FKBP10-FAM134C FKBP10 chr17 39973455 + FAM134C chr17 40739882 - Exonic hg19 ESCA TCGA-L5-A4OW 3 In-Frame Intra-chr q21.2 5449 ChimerSeq FusionScan TCGA_RNA-Seq TPMT-BTBD9 TPMT chr6 18149218 - BTBD9 chr6 38312869 - Exonic hg19 ESCA TCGA-L5-A4OW 3 In-Frame Intra-chr p22.3 p21.2 Seq+ 5450 ChimerSeq FusionScan TCGA_RNA-Seq CPD-CCDC57 CPD chr17 28769468 + CCDC57 chr17 80146295 - Exonic hg19 ESCA TCGA-L5-A4OW 3 Out-of-Frame Intra-chr q11.2 Tumor suppressor gene q25.3 5451 ChimerSeq FusionScan TCGA_RNA-Seq JMJD6-CD300LF JMJD6 chr17 74719853 - CD300LF chr17 72700955 - Exonic hg19 ESCA TCGA-L5-A4OW 2 In-Frame Intra-chr q25.1 q25.1 5452 ChimerSeq FusionScan TCGA_RNA-Seq CYP51A1-ANKIB1 CYP51A1 chr7 91763486 - ANKIB1 chr7 91924202 + Exonic hg19 ESCA TCGA-L5-A4OW 2 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 5453 ChimerSeq FusionScan TCGA_RNA-Seq SEPT9-BAIAP2 SEPT9 chr17 75316430 + BAIAP2 chr17 79089569 + Exonic hg19 ESCA TCGA-L5-A4OW 2 Out-of-Frame Intra-chr q25.3 Seq+ 5454 ChimerSeq FusionScan TCGA_RNA-Seq FKBP10-FAM134C FKBP10 chr17 39969531 + FAM134C chr17 40738909 - Exonic hg19 ESCA TCGA-L5-A4OW 2 In-Frame Intra-chr q21.2 5455 ChimerSeq FusionScan TCGA_RNA-Seq CTNNB1-CHEK1 CTNNB1 chr3 41241161 + CHEK1 chr11 125496643 + Exonic hg19 ESCA TCGA-L5-A4OW 2 5'UTR-5'UTR Inter-chr p22.1 Oncogene q24.2 Oncogene Tumor suppressor gene 5456 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC24-ELP4 DNAJC24 chr11 31392406 + ELP4 chr11 31616316 + Exonic hg19 ESCA TCGA-L5-A4OW 2 In-Frame Intra-chr p13 p13 Seq+ 5457 ChimerSeq FusionScan TCGA_RNA-Seq USP36-DNAH17 USP36 chr17 76808941 - DNAH17 chr17 76433950 - Exonic hg19 ESCA TCGA-V5-AASV 6 In-Frame Intra-chr q25.3 q25.3 Seq+ 5458 ChimerSeq FusionScan TCGA_RNA-Seq CBWD2-ZADH2 CBWD2 chr2 114239805 + ZADH2 chr18 72914295 - Exonic hg19 ESCA TCGA-V5-AASV 2 Out-of-Frame Inter-chr q14.1 q22.3 5459 ChimerSeq FusionScan TCGA_RNA-Seq FNDC3B-TNIK FNDC3B chr3 171851336 + TNIK chr3 171065007 - Exonic hg19 ESCA TCGA-L5-A88S 4 CDS-3'UTR Intra-chr q26.31 q26.31 STE:STE20 Seq+ 5460 ChimerSeq FusionScan TCGA_RNA-Seq FNDC3B-TNIK FNDC3B chr3 171851336 + TNIK chr3 170946010 - Exonic hg19 ESCA TCGA-L5-A88S 2 Out-of-Frame Intra-chr q26.31 q26.31 STE:STE20 Seq+ 5461 ChimerSeq FusionScan TCGA_RNA-Seq MCTP1-PIBF1 MCTP1 chr5 94134717 - PIBF1 chr13 73482668 + Exonic hg19 ESCA TCGA-L5-A88S 2 In-Frame Inter-chr q15 q21.33 5462 ChimerSeq FusionScan TCGA_RNA-Seq ATF2-MTX2 ATF2 chr2 176032777 - MTX2 chr2 177202220 + Exonic hg19 ESCA TCGA-L5-A88S 2 5'UTR-5'UTR Intra-chr q31.1 Transcription factor q31.1 5463 ChimerSeq FusionScan TCGA_RNA-Seq PHC3-NCEH1 PHC3 chr3 169824619 - NCEH1 chr3 172365904 - Exonic hg19 ESCA TCGA-L5-A88S 2 Out-of-Frame Intra-chr q26.2 Tumor suppressor gene q26.31 Seq+ 5464 ChimerSeq FusionScan TCGA_RNA-Seq ZZZ3-FUBP1 ZZZ3 chr1 78107206 - FUBP1 chr1 78435699 - Exonic hg19 ESCA TCGA-L5-A88S 2 5'UTR-CDS Intra-chr p31.1 Transcription factor p31.1 Oncogene 5465 ChimerSeq FusionScan TCGA_RNA-Seq FBXO44-AGTRAP FBXO44 chr1 11718928 + AGTRAP chr1 11807496 + Exonic hg19 ESCA TCGA-IG-A3YB 10 In-Frame Intra-chr p36.22 p36.22 5466 ChimerSeq FusionScan TCGA_RNA-Seq SOS1-DHX57 SOS1 chr2 39237724 - DHX57 chr2 39065089 - Exonic hg19 ESCA TCGA-IG-A3YB 9 Out-of-Frame Intra-chr p22.1 p22.1 Seq+ 5467 ChimerSeq FusionScan TCGA_RNA-Seq KIF5C-STK39 KIF5C chr2 149633312 + STK39 chr2 169038600 - Exonic hg19 ESCA TCGA-IG-A3YB 3 Out-of-Frame Intra-chr q24.3 Seq+ 5468 ChimerSeq FusionScan TCGA_RNA-Seq IQCG-KIAA0226 IQCG chr3 197686399 - KIAA0226 chr3 197445001 - Exonic hg19 ESCA TCGA-IG-A3YB 2 5'UTR-5'UTR Intra-chr q29 5469 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC17-SERINC2 ZCCHC17 chr1 31821821 + SERINC2 chr1 31883231 + Exonic hg19 ESCA TCGA-IG-A3YB 2 In-Frame Intra-chr p35.2 p35.2 5470 ChimerSeq FusionScan TCGA_RNA-Seq ZC3H8-GPR56 ZC3H8 chr2 113007767 - GPR56 chr16 57695608 + Exonic hg19 ESCA TCGA-IG-A3YB 2 Out-of-Frame Inter-chr q14.1 Transcription factor q21 5471 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152498705 + Exonic hg19 ESCA TCGA-IG-A3YB 2 In-Frame Intra-chr q36.1 Seq+ 5472 ChimerSeq FusionScan TCGA_RNA-Seq PTCD3-MPRIP PTCD3 chr2 86362110 + MPRIP chr17 17075031 + Exonic hg19 ESCA TCGA-VR-A8ER 2 Out-of-Frame Inter-chr p11.2 p11.2 5473 ChimerSeq FusionScan TCGA_RNA-Seq DPM2-MAP4K4 DPM2 chr9 130698831 - MAP4K4 chr2 102482892 + Exonic hg19 ESCA TCGA-VR-A8ER 2 Out-of-Frame Inter-chr q34.11 q11.2 5474 ChimerSeq FusionScan TCGA_RNA-Seq BAZ2B-WDR96 BAZ2B chr2 160472752 - WDR96 chr10 105893542 - Exonic hg19 ESCA TCGA-IG-A5B8 15 5'UTR-CDS Inter-chr q24.2 Transcription factor Seq+ 5475 ChimerSeq FusionScan TCGA_RNA-Seq SEMA4B-GLUD1 SEMA4B chr15 90744967 + GLUD1 chr10 88827914 - Exonic hg19 ESCA TCGA-IG-A5B8 2 In-Frame Inter-chr q26.1 q23.2 5476 ChimerSeq FusionScan TCGA_RNA-Seq SCAF4-FAM165B SCAF4 chr21 33103975 - FAM165B chr21 35751726 + Exonic hg19 ESCA TCGA-IG-A5B8 2 CDS-5'UTR Intra-chr q22.11 5477 ChimerSeq FusionScan TCGA_RNA-Seq PGLYRP3-SPRR2G PGLYRP3 chr1 153274884 - SPRR2G chr1 153122607 - Exonic hg19 ESCA TCGA-IG-A5B8 2 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 5478 ChimerSeq FusionScan TCGA_RNA-Seq COL5A2-AP5Z1 COL5A2 chr2 189927735 - AP5Z1 chr7 4830303 + Exonic hg19 ESCA TCGA-IG-A5B8 2 In-Frame Inter-chr q32.2 p22.1 5479 ChimerSeq FusionScan TCGA_RNA-Seq CTTN-KIRREL3 CTTN chr11 70244720 + KIRREL3 chr11 126343361 - Exonic hg19 ESCA TCGA-IG-A3I8 21 5'UTR-CDS Intra-chr q13.3 q24.2 Seq+ 5480 ChimerSeq FusionScan TCGA_RNA-Seq ST3GAL4-C11orf70 ST3GAL4 chr11 126279306 + C11orf70 chr11 101929610 + Exonic hg19 ESCA TCGA-IG-A3I8 10 In-Frame Intra-chr q24.2 q22.1 Seq+ 5481 ChimerSeq FusionScan TCGA_RNA-Seq DCPS-CCND1 DCPS chr11 126176639 + CCND1 chr11 69462761 + Exonic hg19 ESCA TCGA-IG-A3I8 10 In-Frame Intra-chr q24.2 q13.3 Oncogene Seq+ 5482 ChimerSeq FusionScan TCGA_RNA-Seq ST3GAL4-C11orf70 ST3GAL4 chr11 126283543 + C11orf70 chr11 101929610 + Exonic hg19 ESCA TCGA-IG-A3I8 8 In-Frame Intra-chr q24.2 q22.1 Seq+ 5483 ChimerSeq FusionScan TCGA_RNA-Seq SOCS6-CTDP1 SOCS6 chr18 67956326 + CTDP1 chr18 77455224 + Exonic hg19 ESCA TCGA-IG-A3I8 7 5'UTR-5'UTR Intra-chr q22.2 Seq+ 5484 ChimerSeq FusionScan TCGA_RNA-Seq DCPS-YAP1 DCPS chr11 126176639 + YAP1 chr11 102033186 + Exonic hg19 ESCA TCGA-IG-A3I8 5 Out-of-Frame Intra-chr q24.2 q22.1 Tumor suppressor gene Seq+ 5485 ChimerSeq FusionScan TCGA_RNA-Seq ST3GAL4-FGF19 ST3GAL4 chr11 126225737 + FGF19 chr11 69514344 - Exonic hg19 ESCA TCGA-IG-A3I8 5 5'UTR-CDS Intra-chr q24.2 q13.3 Seq+ 5486 ChimerSeq FusionScan TCGA_RNA-Seq ST3GAL4-FGF19 ST3GAL4 chr11 126225737 + FGF19 chr11 69518132 - Exonic hg19 ESCA TCGA-IG-A3I8 3 5'UTR-CDS Intra-chr q24.2 q13.3 Seq+ 5487 ChimerSeq FusionScan TCGA_RNA-Seq CBFA2T2-GNAI3 CBFA2T2 chr20 32078107 + GNAI3 chr1 110116358 + Exonic hg19 ESCA TCGA-IG-A3I8 2 In-Frame Inter-chr q11.21 p13.3 5488 ChimerSeq FusionScan TCGA_RNA-Seq TANC1-AGAP3 TANC1 chr2 160043535 + AGAP3 chr7 150815296 + Exonic hg19 ESCA TCGA-IG-A3I8 2 Out-of-Frame Inter-chr q24.2 q36.1 5489 ChimerSeq FusionScan TCGA_RNA-Seq YAP1-CDON YAP1 chr11 101985125 + CDON chr11 125893432 - Exonic hg19 ESCA TCGA-IG-A3I8 2 CDS-5'UTR Intra-chr q22.1 Tumor suppressor gene q24.2 5490 ChimerSeq FusionScan TCGA_RNA-Seq CCND1-YAP1 CCND1 chr11 69462910 + YAP1 chr11 102033186 + Exonic hg19 ESCA TCGA-IG-A3I8 2 Out-of-Frame Intra-chr q13.3 Oncogene q22.1 Tumor suppressor gene 5491 ChimerSeq FusionScan TCGA_RNA-Seq CBFA2T2-GNAS CBFA2T2 chr20 32078107 + GNAS chr20 57470666 + Exonic hg19 ESCA TCGA-IG-A3I8 2 In-Frame Intra-chr q11.21 q13.32 Oncogene 5492 ChimerSeq FusionScan TCGA_RNA-Seq NUP62-ATF5 NUP62 chr19 50432582 - ATF5 chr19 50435678 + Exonic hg19 ESCA TCGA-IG-A625 2 5'UTR-CDS Intra-chr q13.33 q13.33 Transcription factor Seq+ 5493 ChimerSeq FusionScan TCGA_RNA-Seq ASAP2-CPSF3 ASAP2 chr2 9468040 + CPSF3 chr2 9568893 + Exonic hg19 ESCA TCGA-2H-A9GQ 15 In-Frame Intra-chr p25.1 p25.1 Seq+ 5494 ChimerSeq FusionScan TCGA_RNA-Seq UHRF1BP1-ANKS1A UHRF1BP1 chr6 34825694 + ANKS1A chr6 35050467 + Exonic hg19 ESCA TCGA-2H-A9GQ 8 In-Frame Intra-chr p21.31 p21.31 Seq+ 5495 ChimerSeq FusionScan TCGA_RNA-Seq FAM172A-FLJ42709 FAM172A chr5 93294481 - FLJ42709 chr5 92774447 - Exonic hg19 ESCA TCGA-2H-A9GQ 4 CDS-3'UTR Intra-chr q15 Tumor suppressor gene Seq+ 5496 ChimerSeq FusionScan TCGA_RNA-Seq MAP4K5-L2HGDH MAP4K5 chr14 50901111 - L2HGDH chr14 50736048 - Exonic hg19 ESCA TCGA-2H-A9GQ 3 Out-of-Frame Intra-chr q22.1 q21.3 Seq+ 5497 ChimerSeq FusionScan TCGA_RNA-Seq DMXL1-TNFAIP8 DMXL1 chr5 118569162 + TNFAIP8 chr5 118728510 + Exonic hg19 ESCA TCGA-2H-A9GQ 3 Out-of-Frame Intra-chr q23.1 q23.1 Seq+ 5498 ChimerSeq FusionScan TCGA_RNA-Seq RNF111-TLN2 RNF111 chr15 59280267 + TLN2 chr15 63084839 + Exonic hg19 ESCA TCGA-2H-A9GQ 3 5'UTR-CDS Intra-chr q22.1 Tumor suppressor gene q22.2 Seq+ 5499 ChimerSeq FusionScan TCGA_RNA-Seq EIF2C2-TRAPPC9 EIF2C2 chr8 141645583 - TRAPPC9 chr8 141321473 - Exonic hg19 ESCA TCGA-2H-A9GQ 3 In-Frame Intra-chr q24.3 5500 ChimerSeq FusionScan TCGA_RNA-Seq FAM172A-FLJ42709 FAM172A chr5 93294481 - FLJ42709 chr5 92747215 - Exonic hg19 ESCA TCGA-2H-A9GQ 3 CDS-3'UTR Intra-chr q15 Tumor suppressor gene Seq+ 5501 ChimerSeq FusionScan TCGA_RNA-Seq NUDC-TRNP1 NUDC chr1 27250657 + TRNP1 chr1 27326337 + Exonic hg19 ESCA TCGA-2H-A9GQ 2 CDS-3'UTR Intra-chr p36.11 p36.11 5502 ChimerSeq FusionScan TCGA_RNA-Seq IQCH-MAP2K5 IQCH chr15 67553732 + MAP2K5 chr15 68098983 + Exonic hg19 ESCA TCGA-2H-A9GQ 2 In-Frame Intra-chr q23 q23 STE:STE7 Seq+ 5503 ChimerSeq FusionScan TCGA_RNA-Seq PCDH15-FAM134C PCDH15 chr10 56423931 - FAM134C chr17 40744180 - Exonic hg19 ESCA TCGA-2H-A9GQ 2 Out-of-Frame Inter-chr q21.1 5504 ChimerSeq FusionScan TCGA_RNA-Seq LYPLAL1-KCTD3 LYPLAL1 chr1 219352588 + KCTD3 chr1 215768697 + Exonic hg19 ESCA TCGA-2H-A9GQ 2 Out-of-Frame Intra-chr q41 q41 5505 ChimerSeq FusionScan TCGA_RNA-Seq PSMD1-ARMC9 PSMD1 chr2 231951895 + ARMC9 chr2 232196504 + Exonic hg19 ESCA TCGA-2H-A9GQ 2 Out-of-Frame Intra-chr q37.1 q37.1 Seq+ 5506 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1L1-LSM1 WHSC1L1 chr8 38239316 - LSM1 chr8 38021358 - Exonic hg19 ESCA TCGA-2H-A9GQ 2 5'UTR-CDS Intra-chr p11.23 Tumor suppressor gene p11.23 Seq+ 5507 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-RPL22 RCC1 chr1 28834672 + RPL22 chr1 6257816 - Exonic hg19 ESCA TCGA-2H-A9GQ 2 5'UTR-CDS Intra-chr p35.3 p36.31 Seq+ 5508 ChimerSeq FusionScan TCGA_RNA-Seq MGA-MAPKBP1 MGA chr15 41962156 + MAPKBP1 chr15 42092020 + Exonic hg19 ESCA TCGA-2H-A9GQ 2 Out-of-Frame Intra-chr q15.1 Transcription factor q15.1 Seq+ 5509 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R2A-DPYSL2 PPP2R2A chr8 26196503 + DPYSL2 chr8 26439484 + Exonic hg19 ESCA TCGA-2H-A9GQ 2 In-Frame Intra-chr p21.2 p21.2 Seq+ 5510 ChimerSeq FusionScan TCGA_RNA-Seq EPC1-ARHGAP28 EPC1 chr10 32580090 - ARHGAP28 chr18 6873407 + Exonic hg19 ESCA TCGA-L5-A4OR 29 In-Frame Inter-chr p11.22 p11.31 Seq+ 5511 ChimerSeq FusionScan TCGA_RNA-Seq L3MBTL4-C18orf1 L3MBTL4 chr18 6301901 - C18orf1 chr18 13438242 + Exonic hg19 ESCA TCGA-L5-A4OR 23 In-Frame Intra-chr p11.31 Tumor suppressor gene Transcription factor 5512 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP28-L3MBTL4 ARHGAP28 chr18 6873774 + L3MBTL4 chr18 6301956 - Exonic hg19 ESCA TCGA-L5-A4OR 20 In-Frame Intra-chr p11.31 p11.31 Tumor suppressor gene Transcription factor Seq+ 5513 ChimerSeq FusionScan TCGA_RNA-Seq PTGES3-SPATS2 PTGES3 chr12 57081781 - SPATS2 chr12 49908337 + Exonic hg19 ESCA TCGA-L5-A4OR 6 In-Frame Intra-chr q13.3 q13.12 Seq+ 5514 ChimerSeq FusionScan TCGA_RNA-Seq EPC1-L3MBTL4 EPC1 chr10 32580090 - L3MBTL4 chr18 6301956 - Exonic hg19 ESCA TCGA-L5-A4OR 4 In-Frame Inter-chr p11.22 p11.31 Tumor suppressor gene Transcription factor 5515 ChimerSeq FusionScan TCGA_RNA-Seq USP54-PIK3CD USP54 chr10 75280665 - PIK3CD chr1 9775598 + Exonic hg19 ESCA TCGA-L5-A4OR 2 Out-of-Frame Inter-chr q22.2 p36.22 Oncogene 5516 ChimerSeq FusionScan TCGA_RNA-Seq RG9MTD1-MGC34034 RG9MTD1 chr3 101280847 + MGC34034 chr6 134158730 + Exonic hg19 ESCA TCGA-L5-A4OR 2 5'UTR-5'UTR Inter-chr 5517 ChimerSeq FusionScan TCGA_RNA-Seq VTI1A-TAX1BP1 VTI1A chr10 114428757 + TAX1BP1 chr7 27867356 + Exonic hg19 ESCA TCGA-L5-A4OR 2 Out-of-Frame Inter-chr q25.2 p15.2 5518 ChimerSeq FusionScan TCGA_RNA-Seq PIH1D1-KPNB1 PIH1D1 chr19 49954741 - KPNB1 chr17 45757385 + Exonic hg19 ESCA TCGA-Z6-A9VB 2 Out-of-Frame Inter-chr q13.33 q21.32 5519 ChimerSeq FusionScan TCGA_RNA-Seq CDON-GSTA4 CDON chr11 125893295 - GSTA4 chr6 52849403 - Exonic hg19 ESCA TCGA-Z6-A9VB 2 Out-of-Frame Inter-chr q24.2 p12.2 5520 ChimerSeq FusionScan TCGA_RNA-Seq CERS6-NFE2L2 CERS6 chr2 169313128 + NFE2L2 chr2 178098999 - Exonic hg19 ESCA TCGA-Z6-A9VB 2 Out-of-Frame Intra-chr q24.3 q31.2 Oncogene Transcription factor 5521 ChimerSeq FusionScan TCGA_RNA-Seq TXN-GNB1 TXN chr9 113007057 - GNB1 chr1 1720708 - Exonic hg19 ESCA TCGA-LN-A9FR 6 In-Frame Inter-chr q31.3 p36.33 Seq+ 5522 ChimerSeq FusionScan TCGA_RNA-Seq MOB3B-NTM MOB3B chr9 27529552 - NTM chr11 131781457 + Exonic hg19 ESCA TCGA-LN-A9FR 4 5'UTR-CDS Inter-chr p21.2 q25 5523 ChimerSeq FusionScan TCGA_RNA-Seq C18orf25-ZFPM2 C18orf25 chr18 43833786 + ZFPM2 chr8 106573590 + Exonic hg19 ESCA TCGA-LN-A9FR 3 Out-of-Frame Inter-chr q21.1 q22.3 Transcription factor 5524 ChimerSeq FusionScan TCGA_RNA-Seq ZNF160-PRKAR1A ZNF160 chr19 53594665 - PRKAR1A chr17 66521894 + Exonic hg19 ESCA TCGA-LN-A9FR 2 5'UTR-CDS Inter-chr q13.42 Transcription factor q24.2 Oncogene Tumor suppressor gene 5525 ChimerSeq FusionScan TCGA_RNA-Seq SEC31A-SMAD1 SEC31A chr4 83778104 - SMAD1 chr4 146435589 + Exonic hg19 ESCA TCGA-LN-A9FR 2 CDS-5'UTR Intra-chr q21.22 q31.21 Transcription factor 5526 ChimerSeq FusionScan TCGA_RNA-Seq GALNT2-AATF GALNT2 chr1 230339036 + AATF chr17 35343915 + Exonic hg19 ESCA TCGA-LN-A9FR 2 Out-of-Frame Inter-chr q42.13 5527 ChimerSeq FusionScan TCGA_RNA-Seq ST3GAL2-COG4 ST3GAL2 chr16 70472851 - COG4 chr16 70517872 - Exonic hg19 ESCA TCGA-L5-A4OJ 13 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 5528 ChimerSeq FusionScan TCGA_RNA-Seq GATA4-TRIB1 GATA4 chr8 11566437 + TRIB1 chr8 126448247 + Exonic hg19 ESCA TCGA-L5-A4OJ 10 Out-of-Frame Intra-chr p23.1 Tumor suppressor gene Transcription factor q24.13 Seq+ 5529 ChimerSeq FusionScan TCGA_RNA-Seq CAPZA2-KCNK1 CAPZA2 chr7 116502704 + KCNK1 chr1 233802340 + Exonic hg19 ESCA TCGA-L5-A4OJ 2 Out-of-Frame Inter-chr q31.2 q42.2 5530 ChimerSeq FusionScan TCGA_RNA-Seq EGFR-VOPP1 EGFR chr7 55087058 + VOPP1 chr7 55588823 - Exonic hg19 ESCA TCGA-L5-A4OJ 2 Out-of-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 5531 ChimerSeq FusionScan TCGA_RNA-Seq SNHG8-PSPH SNHG8 chr4 119200292 + PSPH chr7 56079562 - Exonic hg19 ESCA TCGA-L5-A4OJ 2 5'UTR-CDS Inter-chr q26 p11.2 5532 ChimerSeq FusionScan TCGA_RNA-Seq EIF4G3-GBP2 EIF4G3 chr1 21377358 - GBP2 chr1 89575949 - Exonic hg19 ESCA TCGA-L5-A4OJ 2 5'UTR-CDS Intra-chr p36.12 p22.2 5533 ChimerSeq FusionScan TCGA_RNA-Seq POLR1C-MRPS18A POLR1C chr6 43488786 + MRPS18A chr6 43639643 - Exonic hg19 ESCA TCGA-L5-A4OJ 2 In-Frame Intra-chr p21.1 p21.1 5534 ChimerSeq FusionScan TCGA_RNA-Seq RB1-ITM2B RB1 chr13 48881542 + ITM2B chr13 48827943 + Exonic hg19 ESCA TCGA-L5-A4OJ 2 In-Frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Seq+ 5535 ChimerSeq FusionScan TCGA_RNA-Seq ANXA2-TPM1 ANXA2 chr15 60690141 - TPM1 chr15 63349183 + Exonic hg19 ESCA TCGA-L5-A4OJ 2 5'UTR-CDS Intra-chr q22.2 q22.2 5536 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 ESCA TCGA-L5-A4OJ 2 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 5537 ChimerSeq FusionScan TCGA_RNA-Seq CTSB-FDFT1 CTSB chr8 11704560 - FDFT1 chr8 11695896 + Exonic hg19 ESCA TCGA-L5-A4OJ 2 Out-of-Frame Intra-chr p23.1 p23.1 5538 ChimerSeq FusionScan TCGA_RNA-Seq TGFBR2-CLASP2 TGFBR2 chr3 30715738 + CLASP2 chr3 33686395 - Exonic hg19 ESCA TCGA-L5-A4OJ 2 In-Frame Intra-chr p24.1 Oncogene Tumor suppressor gene p22.3 5539 ChimerSeq FusionScan TCGA_RNA-Seq USP36-DNAH17 USP36 chr17 76808941 - DNAH17 chr17 76433950 - Exonic hg19 ESCA TCGA-V5-AASV 10 In-Frame Intra-chr q25.3 q25.3 Seq+ 5540 ChimerSeq FusionScan TCGA_RNA-Seq CBWD2-ZADH2 CBWD2 chr2 114239805 + ZADH2 chr18 72914295 - Exonic hg19 ESCA TCGA-V5-AASV 2 Out-of-Frame Inter-chr q14.1 q22.3 5541 ChimerSeq FusionScan TCGA_RNA-Seq RNGTT-GABRR2 RNGTT chr6 89600213 - GABRR2 chr6 89967700 - Exonic hg19 ESCA TCGA-V5-AASV 2 Out-of-Frame Intra-chr q15 q15 5542 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152480271 + Exonic hg19 ESCA TCGA-V5-AASV 2 Out-of-Frame Intra-chr q36.1 Seq+ 5543 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 ESCA TCGA-L5-A4OM 10 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 5544 ChimerSeq FusionScan TCGA_RNA-Seq ATP6V1D-ZFYVE26 ATP6V1D chr14 67826374 - ZFYVE26 chr14 68272335 - Exonic hg19 ESCA TCGA-L5-A4OM 4 Out-of-Frame Intra-chr q23.3 q24.1 Seq+ 5545 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-EMP1 RCC1 chr1 28834672 + EMP1 chr12 13364402 + Exonic hg19 ESCA TCGA-L5-A4OM 2 5'UTR-5'UTR Inter-chr p35.3 p13.1 Tumor suppressor gene 5546 ChimerSeq FusionScan TCGA_RNA-Seq FTX-SMC2 FTX chrX 73494176 - SMC2 chr9 106862669 + Exonic hg19 ESCA TCGA-L5-A4OM 2 3'UTR-CDS Inter-chr q13.2 q31.1 5547 ChimerSeq FusionScan TCGA_RNA-Seq SECISBP2-HSPH1 SECISBP2 chr9 91934712 + HSPH1 chr13 31719905 - Exonic hg19 ESCA TCGA-L5-A4OM 2 Out-of-Frame Inter-chr q22.2 q12.3 5548 ChimerSeq FusionScan TCGA_RNA-Seq TRPC4-DCLK1 TRPC4 chr13 38443731 - DCLK1 chr13 36686352 - Exonic hg19 ESCA TCGA-L5-A4OM 2 5'UTR-CDS Intra-chr q13.3 q13.3 CAMK:DCAMKL 5549 ChimerSeq FusionScan TCGA_RNA-Seq UBP1-TFCP2L1 UBP1 chr3 33453072 - TFCP2L1 chr2 122004546 - Exonic hg19 ESCA TCGA-L5-A4OM 2 In-Frame Inter-chr p22.3 Transcription factor q14.2 Transcription factor 5550 ChimerSeq FusionScan TCGA_RNA-Seq TRIM26-DHX16 TRIM26 chr6 30181081 - DHX16 chr6 30627611 - Exonic hg19 ESCA TCGA-JY-A939 47 5'UTR-5'UTR Intra-chr Seq+ 5551 ChimerSeq FusionScan TCGA_RNA-Seq TRIM26-DHX16 TRIM26 chr6 30181081 - DHX16 chr6 30628019 - Exonic hg19 ESCA TCGA-JY-A939 13 5'UTR-5'UTR Intra-chr Seq+ 5552 ChimerSeq FusionScan TCGA_RNA-Seq ATP4A-FKBP4 ATP4A chr19 36049894 - FKBP4 chr12 2908253 + Exonic hg19 ESCA TCGA-JY-A939 2 In-Frame Inter-chr q13.12 p13.33 5553 ChimerSeq FusionScan TCGA_RNA-Seq HIP1R-UBL5 HIP1R chr12 123332641 + UBL5 chr19 9939267 + Exonic hg19 ESCA TCGA-JY-A939 2 Out-of-Frame Inter-chr q24.31 p13.2 Tumor suppressor gene 5554 ChimerSeq FusionScan TCGA_RNA-Seq C22orf39-MAPK1 C22orf39 chr22 19434900 - MAPK1 chr22 22162135 - Exonic hg19 ESCA TCGA-JY-A939 2 Out-of-Frame Intra-chr q11.21 q11.22 Oncogene 5555 ChimerSeq FusionScan TCGA_RNA-Seq KPNB1-UBAP2L KPNB1 chr17 45736026 + UBAP2L chr1 154231452 + Exonic hg19 ESCA TCGA-JY-A939 2 In-Frame Inter-chr q21.32 q21.3 5556 ChimerSeq FusionScan TCGA_RNA-Seq PAN3-KPNA3 PAN3 chr13 28752072 + KPNA3 chr13 50321129 - Exonic hg19 ESCA TCGA-JY-A939 2 In-Frame Intra-chr q12.2 q14.2 5557 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0284-C1orf135 KIAA0284 chr14 105331850 + C1orf135 chr1 26164045 - Exonic hg19 ESCA TCGA-L5-A8NE 24 5'UTR-CDS Inter-chr Seq+ 5558 ChimerSeq FusionScan TCGA_RNA-Seq SPSB3-ECI1 SPSB3 chr16 1832502 - ECI1 chr16 2293225 - Exonic hg19 ESCA TCGA-L5-A8NE 22 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 5559 ChimerSeq FusionScan TCGA_RNA-Seq ATP6V0E1-ERGIC1 ATP6V0E1 chr5 172410967 + ERGIC1 chr5 172315701 + Exonic hg19 ESCA TCGA-L5-A8NE 16 In-Frame Intra-chr q35.1 q35.1 Seq+ 5560 ChimerSeq FusionScan TCGA_RNA-Seq FA2H-KARS FA2H chr16 74773920 - KARS chr16 75665753 - Exonic hg19 ESCA TCGA-L5-A8NE 15 In-Frame Intra-chr q23.1 q23.1 Seq+ 5561 ChimerSeq FusionScan TCGA_RNA-Seq CCT4-BIRC6 CCT4 chr2 62107420 - BIRC6 chr2 32756421 + Exonic hg19 ESCA TCGA-L5-A8NE 14 In-Frame Intra-chr p15 p22.3 Seq+ 5562 ChimerSeq FusionScan TCGA_RNA-Seq PPFIA1-XRRA1 PPFIA1 chr11 70118542 + XRRA1 chr11 74559507 - Exonic hg19 ESCA TCGA-L5-A8NE 10 In-Frame Intra-chr q13.3 q13.4 Seq+ 5563 ChimerSeq FusionScan TCGA_RNA-Seq PSMG2-OSBPL1A PSMG2 chr18 12703163 + OSBPL1A chr18 21914294 - Exonic hg19 ESCA TCGA-L5-A8NE 10 Out-of-Frame Intra-chr p11.21 q11.2 Seq+ 5564 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPL-TBCB HNRNPL chr19 39342935 - TBCB chr19 36606942 + Exonic hg19 ESCA TCGA-L5-A8NE 9 5'UTR-CDS Intra-chr q13.12 5565 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHA7-USH1C PLEKHA7 chr11 17035535 - USH1C chr11 17523527 - Exonic hg19 ESCA TCGA-L5-A8NE 8 Out-of-Frame Intra-chr p15.1 p15.1 Seq+ 5566 ChimerSeq FusionScan TCGA_RNA-Seq IP6K1-UBA7 IP6K1 chr3 49823786 - UBA7 chr3 49847616 - Exonic hg19 ESCA TCGA-L5-A8NE 8 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 5567 ChimerSeq FusionScan TCGA_RNA-Seq C6orf147-SLC17A5 C6orf147 chr6 74001720 - SLC17A5 chr6 74325170 - Exonic hg19 ESCA TCGA-L5-A8NE 5 3'UTR-CDS Intra-chr q13 5568 ChimerSeq FusionScan TCGA_RNA-Seq CWC25-C17orf98 CWC25 chr17 36981418 - C17orf98 chr17 36993493 - Exonic hg19 ESCA TCGA-L5-A8NE 5 In-Frame Intra-chr q12 q12 Seq+ 5569 ChimerSeq FusionScan TCGA_RNA-Seq NPR2-BAIAP2 NPR2 chr9 35807395 + BAIAP2 chr17 79073727 + Exonic hg19 ESCA TCGA-L5-A8NE 4 In-Frame Inter-chr p13.3 Tumor suppressor gene q25.3 5570 ChimerSeq FusionScan TCGA_RNA-Seq IP6K1-UBA7 IP6K1 chr3 49823786 - UBA7 chr3 49847312 - Exonic hg19 ESCA TCGA-L5-A8NE 3 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 5571 ChimerSeq FusionScan TCGA_RNA-Seq HBS1L-AHI1 HBS1L chr6 135360710 - AHI1 chr6 135788772 - Exonic hg19 ESCA TCGA-L5-A8NE 3 Out-of-Frame Intra-chr q23.3 q23.3 5572 ChimerSeq FusionScan TCGA_RNA-Seq COPZ1-FLJ12825 COPZ1 chr12 54718965 + FLJ12825 chr12 54512387 + Exonic hg19 ESCA TCGA-L5-A8NE 3 CDS-5'UTR Intra-chr q13.13 q13.13 5573 ChimerSeq FusionScan TCGA_RNA-Seq IP6K1-UBA7 IP6K1 chr3 49823786 - UBA7 chr3 49848105 - Exonic hg19 ESCA TCGA-L5-A8NE 3 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 5574 ChimerSeq FusionScan TCGA_RNA-Seq CWC25-C17orf98 CWC25 chr17 36981418 - C17orf98 chr17 36991599 - Exonic hg19 ESCA TCGA-L5-A8NE 2 Out-of-Frame Intra-chr q12 q12 Seq+ 5575 ChimerSeq FusionScan TCGA_RNA-Seq AK4-TMEM48 AK4 chr1 65656512 + TMEM48 chr1 54291609 - Exonic hg19 ESCA TCGA-L5-A8NE 2 Out-of-Frame Intra-chr p31.3 5576 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-NFIX RCC1 chr1 28832596 + NFIX chr19 13135834 + Exonic hg19 ESCA TCGA-L5-A8NE 2 5'UTR-CDS Inter-chr p35.3 p13.13 Transcription factor 5577 ChimerSeq FusionScan TCGA_RNA-Seq LYZ-CCT2 LYZ chr12 69746078 + CCT2 chr12 69983264 + Exonic hg19 ESCA TCGA-L5-A8NE 2 In-Frame Intra-chr q15 q15 Seq+ 5578 ChimerSeq FusionScan TCGA_RNA-Seq ARRDC1-EHMT1 ARRDC1 chr9 140509452 + EHMT1 chr9 140611077 + Exonic hg19 ESCA TCGA-L5-A8NE 2 In-Frame Intra-chr q34.3 q34.3 Seq+ 5579 ChimerSeq FusionScan TCGA_RNA-Seq NUP188-ENDOG NUP188 chr9 131762084 + ENDOG chr9 131583017 + Exonic hg19 ESCA TCGA-L5-A8NE 2 In-Frame Intra-chr q34.11 q34.11 5580 ChimerSeq FusionScan TCGA_RNA-Seq USP25-KIF3A USP25 chr21 17138460 + KIF3A chr5 132039311 - Exonic hg19 ESCA TCGA-L5-A8NE 2 In-Frame Inter-chr q21.1 q31.1 5581 ChimerSeq FusionScan TCGA_RNA-Seq PPFIA1-XRRA1 PPFIA1 chr11 70118542 + XRRA1 chr11 74574066 - Exonic hg19 ESCA TCGA-L5-A8NE 2 Out-of-Frame Intra-chr q13.3 q13.4 Seq+ 5582 ChimerSeq FusionScan TCGA_RNA-Seq AK4-TMEM48 AK4 chr1 65656512 + TMEM48 chr1 54293846 - Exonic hg19 ESCA TCGA-L5-A8NE 2 In-Frame Intra-chr p31.3 5583 ChimerSeq FusionScan TCGA_RNA-Seq BAZ2B-ITGB6 BAZ2B chr2 160472752 - ITGB6 chr2 161030650 - Exonic hg19 ESCA TCGA-L5-A8NE 2 5'UTR-CDS Intra-chr q24.2 Transcription factor q24.2 Seq+ 5584 ChimerSeq FusionScan TCGA_RNA-Seq EMID2-GTF2IRD1 EMID2 chr7 101091068 + GTF2IRD1 chr7 73944063 + Exonic hg19 ESCA TCGA-L5-A8NE 2 In-Frame Intra-chr q11.23 Transcription factor 5585 ChimerSeq FusionScan TCGA_RNA-Seq IL17RD-ARHGEF3 IL17RD chr3 57131623 - ARHGEF3 chr3 57069204 - Exonic hg19 ESCA TCGA-L5-A8NE 2 CDS-5'UTR Intra-chr p14.3 Tumor suppressor gene p14.3 5586 ChimerSeq FusionScan TCGA_RNA-Seq PPFIA1-XRRA1 PPFIA1 chr11 70118542 + XRRA1 chr11 74563127 - Exonic hg19 ESCA TCGA-L5-A8NE 2 In-Frame Intra-chr q13.3 q13.4 Seq+ 5587 ChimerSeq FusionScan TCGA_RNA-Seq TNRC18-ACTB TNRC18 chr7 5460690 - ACTB chr7 5569294 - Exonic hg19 ESCA TCGA-L5-A8NE 2 CDS-3'UTR Intra-chr p22.1 p22.1 Seq+ 5588 ChimerSeq FusionScan TCGA_RNA-Seq PDLIM2-SORBS3 PDLIM2 chr8 22451345 + SORBS3 chr8 22411964 + Exonic hg19 ESCA TCGA-L5-A8NE 2 CDS-5'UTR Intra-chr p21.3 p21.3 Seq+ 5589 ChimerSeq FusionScan TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128505576 - RSPO3 chr6 127469792 + Exonic hg19 ESCA TCGA-JY-A938 13 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 5590 ChimerSeq FusionScan TCGA_RNA-Seq RNF4-WHSC1 RNF4 chr4 2502465 + WHSC1 chr4 1952798 + Exonic hg19 ESCA TCGA-JY-A938 10 In-Frame Intra-chr p16.3 Oncogene Seq+ 5591 ChimerSeq FusionScan TCGA_RNA-Seq LETM1-RGS12 LETM1 chr4 1824714 - RGS12 chr4 3344663 + Exonic hg19 ESCA TCGA-JY-A938 4 In-Frame Intra-chr p16.3 p16.3 5592 ChimerSeq FusionScan TCGA_RNA-Seq SLC2A12-SAMD3 SLC2A12 chr6 134373515 - SAMD3 chr6 130634238 - Exonic hg19 ESCA TCGA-JY-A938 2 CDS-5'UTR Intra-chr q23.2 q23.1 Seq+ 5593 ChimerSeq FusionScan TCGA_RNA-Seq PTPRK-ARHGAP18 PTPRK chr6 128505576 - ARHGAP18 chr6 129939997 - Exonic hg19 ESCA TCGA-JY-A938 2 Out-of-Frame Intra-chr Tumor suppressor gene q22.33 Seq+ 5594 ChimerSeq FusionScan TCGA_RNA-Seq MMP17-NOC4L MMP17 chr12 132313198 + NOC4L chr12 132635525 + Exonic hg19 ESCA TCGA-LN-A4A4 2 Out-of-Frame Intra-chr q24.33 q24.33 Seq+ 5595 ChimerSeq FusionScan TCGA_RNA-Seq MOB1B-CORIN MOB1B chr4 71768267 + CORIN chr4 47809064 - Exonic hg19 ESCA TCGA-LN-A4A4 2 Out-of-Frame Intra-chr q13.3 Tumor suppressor gene p12 5596 ChimerSeq FusionScan TCGA_RNA-Seq MKL2-CLEC16A MKL2 chr16 14173211 + CLEC16A chr16 11114049 + Exonic hg19 ESCA TCGA-LN-A4A4 2 5'UTR-CDS Intra-chr p13.12 p13.13 Seq+ 5597 ChimerSeq FusionScan TCGA_RNA-Seq MDN1-MYOF MDN1 chr6 90381918 - MYOF chr10 95111603 - Exonic hg19 ESCA TCGA-LN-A4A4 2 Out-of-Frame Inter-chr q15 q23.33 5598 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0146-BLK KIAA0146 chr8 48206619 + BLK chr8 11400732 + Exonic hg19 ESCA TCGA-JY-A93E 3 CDS-5'UTR Intra-chr p23.1 TK:Src 5599 ChimerSeq FusionScan TCGA_RNA-Seq DET1-PPIP5K2 DET1 chr15 89060012 - PPIP5K2 chr5 102490373 + Exonic hg19 ESCA TCGA-JY-A93E 2 In-Frame Inter-chr q26.1 q21.1 5600 ChimerSeq FusionScan TCGA_RNA-Seq IMMP1L-DCDC1 IMMP1L chr11 31531065 - DCDC1 chr11 31329455 - Exonic hg19 ESCA TCGA-JY-A93E 2 5'UTR-CDS Intra-chr p13 p13 Seq+ 5601 ChimerSeq FusionScan TCGA_RNA-Seq BAIAP2L1-TRRAP BAIAP2L1 chr7 97984353 - TRRAP chr7 98545843 + Exonic hg19 ESCA TCGA-JY-A93E 2 Out-of-Frame Intra-chr q22.1 q22.1 Atypical:PIKK Oncogene 5602 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC17-SERINC2 ZCCHC17 chr1 31821821 + SERINC2 chr1 31883231 + Exonic hg19 ESCA TCGA-JY-A93E 2 In-Frame Intra-chr p35.2 p35.2 5603 ChimerSeq FusionScan TCGA_RNA-Seq MRPL1-FAM190A MRPL1 chr4 78830526 + FAM190A chr4 92007100 + Exonic hg19 ESCA TCGA-LN-A49X 6 In-Frame Intra-chr q21.1 5604 ChimerSeq FusionScan TCGA_RNA-Seq GRAMD4-TNFAIP8L1 GRAMD4 chr22 47033857 + TNFAIP8L1 chr19 4651878 + Exonic hg19 ESCA TCGA-LN-A49X 4 CDS-5'UTR Inter-chr q13.31 p13.3 5605 ChimerSeq FusionScan TCGA_RNA-Seq STK17A-HECW1 STK17A chr7 43647999 + HECW1 chr7 43580761 + Exonic hg19 ESCA TCGA-LN-A49X 3 Out-of-Frame Intra-chr p13 p14.1 Seq+ 5606 ChimerSeq FusionScan TCGA_RNA-Seq PINX1-SOX17 PINX1 chr8 10683661 - SOX17 chr8 55371617 + Exonic hg19 ESCA TCGA-LN-A49X 2 In-Frame Intra-chr p23.1 Tumor suppressor gene q11.23 Transcription factor 5607 ChimerSeq FusionScan TCGA_RNA-Seq ADORA2B-TTC19 ADORA2B chr17 15848897 + TTC19 chr17 15905228 + Exonic hg19 ESCA TCGA-LN-A49X 2 Out-of-Frame Intra-chr p12 p12 5608 ChimerSeq FusionScan TCGA_RNA-Seq MRPL21-DLG2 MRPL21 chr11 68660357 - DLG2 chr11 83962334 - Exonic hg19 ESCA TCGA-LN-A49X 2 Out-of-Frame Intra-chr q13.3 q14.1 5609 ChimerSeq FusionScan TCGA_RNA-Seq GON4L-TRAK1 GON4L chr1 155734790 - TRAK1 chr3 42166911 + Exonic hg19 ESCA TCGA-LN-A49X 2 Out-of-Frame Inter-chr q22 p22.1 5610 ChimerSeq FusionScan TCGA_RNA-Seq ODZ4-EXT2 ODZ4 chr11 78926852 - EXT2 chr11 44129232 + Exonic hg19 ESCA TCGA-LN-A49X 2 5'UTR-5'UTR Intra-chr p11.2 Oncogene Tumor suppressor gene 5611 ChimerSeq FusionScan TCGA_RNA-Seq FAM108C1-NRIP1 FAM108C1 chr15 80988360 + NRIP1 chr21 16340847 - Exonic hg19 ESCA TCGA-LN-A49X 2 CDS-5'UTR Inter-chr q21.1 5612 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-PSMB3 ERBB2 chr17 37876087 + PSMB3 chr17 36916683 + Exonic hg19 ESCA TCGA-L5-A88V 307 In-Frame Intra-chr q12 Oncogene Seq+ 5613 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-PIP4K2B GRB7 chr17 37898969 + PIP4K2B chr17 36927525 - Exonic hg19 ESCA TCGA-L5-A88V 65 In-Frame Intra-chr q12 q12 Seq+ 5614 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-PSMB3 ERBB2 chr17 37873733 + PSMB3 chr17 36916683 + Exonic hg19 ESCA TCGA-L5-A88V 63 In-Frame Intra-chr q12 Oncogene Seq+ 5615 ChimerSeq FusionScan TCGA_RNA-Seq MED1-STARD3 MED1 chr17 37580879 - STARD3 chr17 37809733 + Exonic hg19 ESCA TCGA-L5-A88V 46 CDS-5'UTR Intra-chr q12 Tumor suppressor gene q12 Seq+ 5616 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF10L-PADI6 ARHGEF10L chr1 17930086 + PADI6 chr1 17714875 + Exonic hg19 ESCA TCGA-L5-A88V 15 In-Frame Intra-chr p36.13 Seq+ 5617 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-PIP4K2B GRB7 chr17 37898709 + PIP4K2B chr17 36927525 - Exonic hg19 ESCA TCGA-L5-A88V 15 Out-of-Frame Intra-chr q12 q12 Seq+ 5618 ChimerSeq FusionScan TCGA_RNA-Seq STARD3-FBXL20 STARD3 chr17 37793484 + FBXL20 chr17 37459892 - Exonic hg19 ESCA TCGA-L5-A88V 14 5'UTR-CDS Intra-chr q12 q12 Seq+ 5619 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-PSMB3 ERBB2 chr17 37876087 + PSMB3 chr17 36918663 + Exonic hg19 ESCA TCGA-L5-A88V 9 Out-of-Frame Intra-chr q12 Oncogene Seq+ 5620 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-PIP4K2B GRB7 chr17 37894386 + PIP4K2B chr17 36927525 - Exonic hg19 ESCA TCGA-L5-A88V 6 5'UTR-CDS Intra-chr q12 q12 Seq+ 5621 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-PIP4K2B GRB7 chr17 37899307 + PIP4K2B chr17 36927525 - Exonic hg19 ESCA TCGA-L5-A88V 5 Out-of-Frame Intra-chr q12 q12 Seq+ 5622 ChimerSeq FusionScan TCGA_RNA-Seq COG3-GTF2F2 COG3 chr13 46039345 + GTF2F2 chr13 45781558 + Exonic hg19 ESCA TCGA-L5-A88V 4 Out-of-Frame Intra-chr q14.13 q14.12 5623 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-PIP4K2B GRB7 chr17 37894645 + PIP4K2B chr17 36927525 - Exonic hg19 ESCA TCGA-L5-A88V 4 5'UTR-CDS Intra-chr q12 q12 Seq+ 5624 ChimerSeq FusionScan TCGA_RNA-Seq PRRG2-RPL13A PRRG2 chr19 50091889 + RPL13A chr19 49994985 + Exonic hg19 ESCA TCGA-L5-A88V 3 Out-of-Frame Intra-chr q13.33 q13.33 Seq+ 5625 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1109-FSTL5 KIAA1109 chr4 123171728 + FSTL5 chr4 162463845 - Exonic hg19 ESCA TCGA-L5-A88V 3 Out-of-Frame Intra-chr q27 q32.2 5626 ChimerSeq FusionScan TCGA_RNA-Seq MED1-PGAP3 MED1 chr17 37595417 - PGAP3 chr17 37842272 - Exonic hg19 ESCA TCGA-L5-A88V 3 Out-of-Frame Intra-chr q12 Tumor suppressor gene q12 Oncogene 5627 ChimerSeq FusionScan TCGA_RNA-Seq ENTPD6-ADRM1 ENTPD6 chr20 25205953 + ADRM1 chr20 60882426 + Exonic hg19 ESCA TCGA-L5-A88V 2 Out-of-Frame Intra-chr p11.21 q13.33 5628 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-C1orf43 RCC1 chr1 28832596 + C1orf43 chr1 154192413 - Exonic hg19 ESCA TCGA-L5-A88V 2 5'UTR-CDS Intra-chr p35.3 q21.3 5629 ChimerSeq FusionScan TCGA_RNA-Seq RAC1-AIMP2 RAC1 chr7 6431672 + AIMP2 chr7 6054776 + Exonic hg19 ESCA TCGA-L5-A88V 2 In-Frame Intra-chr p22.1 Oncogene p22.1 Tumor suppressor gene 5630 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC1-PIP4K2A DNAJC1 chr10 22292141 - PIP4K2A chr10 22880710 - Exonic hg19 ESCA TCGA-L5-A88V 2 In-Frame Intra-chr p12.31 p12.2 5631 ChimerSeq FusionScan TCGA_RNA-Seq OSBPL3-ANO1 OSBPL3 chr7 25019504 - ANO1 chr11 69978024 + Exonic hg19 ESCA TCGA-VR-A8EU 18 5'UTR-5'UTR Inter-chr p15.3 q13.3 Seq+ 5632 ChimerSeq FusionScan TCGA_RNA-Seq CCBP2-KRBOX1 CCBP2 chr3 42861203 + KRBOX1 chr3 42980341 + Exonic hg19 ESCA TCGA-VR-A8EU 2 5'UTR-5'UTR Intra-chr p22.1 Seq+ 5633 ChimerSeq FusionScan TCGA_RNA-Seq KREMEN1-ZNRF3 KREMEN1 chr22 29517469 + ZNRF3 chr22 29449566 + Exonic hg19 ESCA TCGA-VR-A8EU 2 Out-of-Frame Intra-chr q12.1 q12.1 Seq+ 5634 ChimerSeq FusionScan TCGA_RNA-Seq OSBPL3-ANO1 OSBPL3 chr7 25019504 - ANO1 chr11 69995815 + Exonic hg19 ESCA TCGA-VR-A8EU 2 5'UTR-5'UTR Inter-chr p15.3 q13.3 Seq+ 5635 ChimerSeq FusionScan TCGA_RNA-Seq RSRC1-FAM190A RSRC1 chr3 158015864 + FAM190A chr4 92007100 + Exonic hg19 ESCA TCGA-VR-A8EU 2 In-Frame Inter-chr q25.32 Seq+ 5636 ChimerSeq FusionScan TCGA_RNA-Seq CD81-NOTCH1 CD81 chr11 2398845 + NOTCH1 chr9 139414017 - Exonic hg19 ESCA TCGA-VR-A8EU 2 Out-of-Frame Inter-chr p15.5 q34.3 Oncogene Tumor suppressor gene 5637 ChimerSeq FusionScan TCGA_RNA-Seq WNK1-ERC1 WNK1 chr12 922980 + ERC1 chr12 1289705 + Exonic hg19 ESCA TCGA-VR-A8EU 2 Out-of-Frame Intra-chr p13.33 Seq+ 5638 ChimerSeq FusionScan TCGA_RNA-Seq MPND-CHAF1A MPND chr19 4345978 + CHAF1A chr19 4418016 + Exonic hg19 ESCA TCGA-IG-A3QL 9 In-Frame Intra-chr p13.3 p13.3 5639 ChimerSeq FusionScan TCGA_RNA-Seq DNAJB6-REPS1 DNAJB6 chr7 157160177 + REPS1 chr6 139242261 - Exonic hg19 ESCA TCGA-IG-A3QL 2 Out-of-Frame Inter-chr q36.3 q24.1 5640 ChimerSeq FusionScan TCGA_RNA-Seq ZNF251-RBX1 ZNF251 chr8 145979067 - RBX1 chr22 41360050 + Exonic hg19 ESCA TCGA-IG-A3QL 2 In-Frame Inter-chr Transcription factor q13.2 5641 ChimerSeq FusionScan TCGA_RNA-Seq ABCC5-MANSC1 ABCC5 chr3 183705557 - MANSC1 chr12 12483892 - Exonic hg19 ESCA TCGA-IG-A3QL 2 Out-of-Frame Inter-chr q27.1 5642 ChimerSeq FusionScan TCGA_RNA-Seq CTNND1-C8orf40 CTNND1 chr11 57529518 + C8orf40 chr8 42401611 + Exonic hg19 ESCA TCGA-IG-A3QL 2 5'UTR-5'UTR Inter-chr q12.1 Tumor suppressor gene 5643 ChimerSeq FusionScan TCGA_RNA-Seq QKI-WHSC1L1 QKI chr6 163836367 + WHSC1L1 chr8 38205733 - Exonic hg19 ESCA TCGA-IG-A3QL 2 CDS-5'UTR Inter-chr q26 p11.23 Tumor suppressor gene 5644 ChimerSeq FusionScan TCGA_RNA-Seq KANSL1L-TRIP12 KANSL1L chr2 210962809 - TRIP12 chr2 230632466 - Exonic hg19 ESCA TCGA-IG-A3QL 2 Out-of-Frame Intra-chr q34 q36.3 5645 ChimerSeq FusionScan TCGA_RNA-Seq MFSD6-ABCC1 MFSD6 chr2 191273229 + ABCC1 chr16 16215831 + Exonic hg19 ESCA TCGA-IG-A3QL 2 5'UTR-CDS Inter-chr q32.2 5646 ChimerSeq FusionScan TCGA_RNA-Seq ZFAND1-NFE2L2 ZFAND1 chr8 82627038 - NFE2L2 chr2 178098999 - Exonic hg19 ESCA TCGA-IG-A3QL 2 Out-of-Frame Inter-chr q21.13 q31.2 Oncogene Transcription factor 5647 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-TMCO3 TBL1XR1 chr3 176914908 - TMCO3 chr13 114164552 + Exonic hg19 ESCA TCGA-IG-A3QL 2 5'UTR-CDS Inter-chr q26.32 q34 5648 ChimerSeq FusionScan TCGA_RNA-Seq ASNA1-NDUFA7 ASNA1 chr19 12849472 + NDUFA7 chr19 8381529 - Exonic hg19 ESCA TCGA-IG-A3QL 2 Out-of-Frame Intra-chr p13.13 p13.2 5649 ChimerSeq FusionScan TCGA_RNA-Seq GAS5-ELMOD3 GAS5 chr1 173834366 - ELMOD3 chr2 85584089 + Exonic hg19 ESCA TCGA-IG-A3QL 2 3'UTR-5'UTR Inter-chr q25.1 Tumor suppressor gene p11.2 5650 ChimerSeq FusionScan TCGA_RNA-Seq RPS27A-TIA1 RPS27A chr2 55461340 + TIA1 chr2 70444126 - Exonic hg19 ESCA TCGA-L7-A6VZ 2 In-Frame Intra-chr p16.1 p13.3 5651 ChimerSeq FusionScan TCGA_RNA-Seq CHMP3-CD8A CHMP3 chr2 86756340 - CD8A chr2 87028780 - Exonic hg19 ESCA TCGA-L7-A6VZ 2 CDS-5'UTR Intra-chr p11.2 p11.2 Seq+ 5652 ChimerSeq FusionScan TCGA_RNA-Seq TTC35-EIF3E TTC35 chr8 109455927 + EIF3E chr8 109241424 - Exonic hg19 ESCA TCGA-L7-A6VZ 2 Out-of-Frame Intra-chr q23.1 5653 ChimerSeq FusionScan TCGA_RNA-Seq MARVELD2-PAFAH1B1 MARVELD2 chr5 68710997 + PAFAH1B1 chr17 2541392 + Exonic hg19 ESCA TCGA-L7-A6VZ 2 5'UTR-5'UTR Inter-chr q13.2 p13.3 Tumor suppressor gene 5654 ChimerSeq FusionScan TCGA_RNA-Seq GNPAT-C1orf131 GNPAT chr1 231377202 + C1orf131 chr1 231364955 - Exonic hg19 ESCA TCGA-L7-A6VZ 2 In-Frame Intra-chr q42.2 q42.2 5655 ChimerSeq FusionScan TCGA_RNA-Seq SEMA4B-ARID1B SEMA4B chr15 90744967 + ARID1B chr6 157495141 + Exonic hg19 ESCA TCGA-L7-A6VZ 2 In-Frame Inter-chr q26.1 q25.3 Oncogene 5656 ChimerSeq FusionScan TCGA_RNA-Seq NAA25-KIF20A NAA25 chr12 112546519 - KIF20A chr5 137520200 + Exonic hg19 ESCA TCGA-L7-A6VZ 2 Out-of-Frame Inter-chr q24.13 q31.2 5657 ChimerSeq FusionScan TCGA_RNA-Seq CHMP3-CD8A CHMP3 chr2 86756340 - CD8A chr2 87034905 - Exonic hg19 ESCA TCGA-L7-A6VZ 2 CDS-5'UTR Intra-chr p11.2 p11.2 Seq+ 5658 ChimerSeq FusionScan TCGA_RNA-Seq UBP1-TFCP2L1 UBP1 chr3 33453072 - TFCP2L1 chr2 122004546 - Exonic hg19 ESCA TCGA-L7-A6VZ 2 In-Frame Inter-chr p22.3 Transcription factor q14.2 Transcription factor 5659 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D12-CYP2C18 TBC1D12 chr10 96256929 + CYP2C18 chr10 96447526 + Exonic hg19 ESCA TCGA-L7-A6VZ 2 Out-of-Frame Intra-chr q23.33 q23.33 Seq+ 5660 ChimerSeq FusionScan TCGA_RNA-Seq CARS-SLC22A18AS CARS chr11 3028108 - SLC22A18AS chr11 2909865 - Exonic hg19 ESCA TCGA-L5-A4OF 16 Out-of-Frame Intra-chr Seq+ 5661 ChimerSeq FusionScan TCGA_RNA-Seq PPP6R2-SBF1 PPP6R2 chr22 50781979 + SBF1 chr22 50887079 - Exonic hg19 ESCA TCGA-L5-A4OF 8 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 5662 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175394270 - Exonic hg19 ESCA TCGA-L5-A4OF 4 5'UTR-CDS Inter-chr q21.1 q35.2 5663 ChimerSeq FusionScan TCGA_RNA-Seq SLMAP-FAF1 SLMAP chr3 57894877 + FAF1 chr1 51267349 - Exonic hg19 ESCA TCGA-L5-A4OF 3 Out-of-Frame Inter-chr p14.3 p32.3 Seq+ 5664 ChimerSeq FusionScan TCGA_RNA-Seq PDZD8-BCAS1 PDZD8 chr10 119078382 - BCAS1 chr20 52602038 - Exonic hg19 ESCA TCGA-L5-A4OF 2 In-Frame Inter-chr q26.11 q13.2 5665 ChimerSeq FusionScan TCGA_RNA-Seq PPP1CB-SALL4 PPP1CB chr2 29006844 + SALL4 chr20 50408891 - Exonic hg19 ESCA TCGA-L5-A4OF 2 In-Frame Inter-chr p23.2 q13.2 Tumor suppressor gene Transcription factor 5666 ChimerSeq FusionScan TCGA_RNA-Seq SNRPD1-OSBPL1A SNRPD1 chr18 19192404 + OSBPL1A chr18 21957499 - Exonic hg19 ESCA TCGA-L5-A4OF 2 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 5667 ChimerSeq FusionScan TCGA_RNA-Seq BCAS3-POLD4 BCAS3 chr17 59161925 + POLD4 chr11 67120548 - Exonic hg19 ESCA TCGA-L5-A4OF 2 In-Frame Inter-chr q23.2 q13.2 Seq+ 5668 ChimerSeq FusionScan TCGA_RNA-Seq GATAD2A-CHST1 GATAD2A chr19 19576423 + CHST1 chr11 45674156 - Exonic hg19 ESCA TCGA-XP-A8T8 8 CDS-5'UTR Inter-chr p13.11 Transcription factor p11.2 Seq+ 5669 ChimerSeq FusionScan TCGA_RNA-Seq GATS-PILRB GATS chr7 99820219 - PILRB chr7 99952765 + Exonic hg19 ESCA TCGA-XP-A8T8 2 3'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 5670 ChimerSeq FusionScan TCGA_RNA-Seq ADH7-ABCG2 ADH7 chr4 100336634 - ABCG2 chr4 89061166 - Exonic hg19 ESCA TCGA-XP-A8T8 2 CDS-5'UTR Intra-chr q23 q22.1 Tumor suppressor gene 5671 ChimerSeq FusionScan TCGA_RNA-Seq PHF11-ITM2B PHF11 chr13 50070231 + ITM2B chr13 48827943 + Exonic hg19 ESCA TCGA-XP-A8T8 2 Out-of-Frame Intra-chr q14.2 q14.2 5672 ChimerSeq FusionScan TCGA_RNA-Seq STT3B-GOLGA4 STT3B chr3 31617996 + GOLGA4 chr3 37402733 + Exonic hg19 ESCA TCGA-XP-A8T8 2 In-Frame Intra-chr p23 p22.2 5673 ChimerSeq FusionScan TCGA_RNA-Seq ERGIC3-RSL1D1 ERGIC3 chr20 34144042 + RSL1D1 chr16 11935677 - Exonic hg19 ESCA TCGA-XP-A8T8 2 In-Frame Inter-chr q11.22 p13.13 5674 ChimerSeq FusionScan TCGA_RNA-Seq CPNE8-MGST1 CPNE8 chr12 39155913 - MGST1 chr12 16507164 + Exonic hg19 ESCA TCGA-2H-A9GH 5 CDS-5'UTR Intra-chr q12 p12.3 Seq+ 5675 ChimerSeq FusionScan TCGA_RNA-Seq NLRC5-FTO NLRC5 chr16 57080553 + FTO chr16 54145673 + Exonic hg19 ESCA TCGA-2H-A9GH 3 In-Frame Intra-chr q13 q12.2 Seq+ 5676 ChimerSeq FusionScan TCGA_RNA-Seq LGALS3-STK39 LGALS3 chr14 55596018 + STK39 chr2 168997268 - Exonic hg19 ESCA TCGA-2H-A9GH 2 5'UTR-CDS Inter-chr q22.3 q24.3 5677 ChimerSeq FusionScan TCGA_RNA-Seq LEPR-MEF2D LEPR chr1 66070920 + MEF2D chr1 156438812 - Exonic hg19 ESCA TCGA-2H-A9GH 2 In-Frame Intra-chr p31.3 q22 Transcription factor Seq+ 5678 ChimerSeq FusionScan TCGA_RNA-Seq UBE2J1-SET UBE2J1 chr6 90062257 - SET chr9 131453448 + Exonic hg19 ESCA TCGA-2H-A9GH 2 In-Frame Inter-chr q15 q34.11 5679 ChimerSeq FusionScan TCGA_RNA-Seq BIRC6-LTBP1 BIRC6 chr2 32756618 + LTBP1 chr2 33442618 + Exonic hg19 ESCA TCGA-L5-A8NR 3 In-Frame Intra-chr p22.3 p22.3 5680 ChimerSeq FusionScan TCGA_RNA-Seq REEP3-RTKN2 REEP3 chr10 65359043 + RTKN2 chr10 64005816 - Exonic hg19 ESCA TCGA-L5-A8NR 3 Out-of-Frame Intra-chr q21.3 q21.2 Seq+ 5681 ChimerSeq FusionScan TCGA_RNA-Seq MKNK2-WIZ MKNK2 chr19 2050799 - WIZ chr19 15538344 - Exonic hg19 ESCA TCGA-L5-A8NR 2 Out-of-Frame Intra-chr p13.3 p13.12 Transcription factor 5682 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT6 NDUFA11 chr19 5896463 - FUT6 chr19 5832590 - Exonic hg19 ESCA TCGA-L5-A8NR 2 CDS-5'UTR Intra-chr p13.3 p13.3 5683 ChimerSeq FusionScan TCGA_RNA-Seq SYDE2-DDAH1 SYDE2 chr1 85665934 - DDAH1 chr1 85817262 - Exonic hg19 ESCA TCGA-L5-A8NR 2 In-Frame Intra-chr p22.3 p22.3 5684 ChimerSeq FusionScan TCGA_RNA-Seq TMEM144-DAPP1 TMEM144 chr4 159133928 + DAPP1 chr4 100756779 + Exonic hg19 ESCA TCGA-L5-A8NR 2 Out-of-Frame Intra-chr q32.1 q23 5685 ChimerSeq FusionScan TCGA_RNA-Seq DMBT1-ARMS2 DMBT1 chr10 124380896 + ARMS2 chr10 124216422 + Exonic hg19 ESCA TCGA-Q9-A6FW 6 Out-of-Frame Intra-chr q26.13 Tumor suppressor gene q26.13 Seq+ 5686 ChimerSeq FusionScan TCGA_RNA-Seq PGAP1-AOX1 PGAP1 chr2 197740469 - AOX1 chr2 201473706 + Exonic hg19 ESCA TCGA-Q9-A6FW 2 CDS-5'UTR Intra-chr q33.1 q33.1 5687 ChimerSeq FusionScan TCGA_RNA-Seq DMBT1-ARMS2 DMBT1 chr10 124339417 + ARMS2 chr10 124216422 + Exonic hg19 ESCA TCGA-Q9-A6FW 2 Out-of-Frame Intra-chr q26.13 Tumor suppressor gene q26.13 Seq+ 5688 ChimerSeq FusionScan TCGA_RNA-Seq PPP2CA-MSN PPP2CA chr5 133561450 - MSN chrX 64936679 + Exonic hg19 ESCA TCGA-Q9-A6FW 2 In-Frame Inter-chr q31.1 Tumor suppressor gene q12 5689 ChimerSeq FusionScan TCGA_RNA-Seq PLAU-C10orf55 PLAU chr10 75672856 + C10orf55 chr10 75672833 - Exonic hg19 ESCA TCGA-Q9-A6FW 2 CDS-5'UTR Intra-chr q22.2 q22.2 5690 ChimerSeq FusionScan TCGA_RNA-Seq IFT80-TNIK IFT80 chr3 160116933 - TNIK chr3 170946010 - Exonic hg19 ESCA TCGA-VR-A8ER 4 5'UTR-CDS Intra-chr q25.33 q26.31 STE:STE20 Seq+ 5691 ChimerSeq FusionScan TCGA_RNA-Seq CYP4F11-FAM95B1 CYP4F11 chr19 16038021 - FAM95B1 chr9 42470479 + Exonic hg19 ESCA TCGA-VR-A8ER 3 CDS-5'UTR Inter-chr p13.12 p11.2 5692 ChimerSeq FusionScan TCGA_RNA-Seq DPM2-MAP4K4 DPM2 chr9 130698831 - MAP4K4 chr2 102482892 + Exonic hg19 ESCA TCGA-VR-A8ER 2 Out-of-Frame Inter-chr q34.11 q11.2 5693 ChimerSeq FusionScan TCGA_RNA-Seq POLD3-RNF169 POLD3 chr11 74347320 + RNF169 chr11 74500670 + Exonic hg19 ESCA TCGA-VR-A8ER 2 In-Frame Intra-chr q13.4 q13.4 Seq+ 5694 ChimerSeq FusionScan TCGA_RNA-Seq DPM2-MAP4K4 DPM2 chr9 130698831 - MAP4K4 chr2 102482889 + Exonic hg19 ESCA TCGA-VR-A8ER 2 Out-of-Frame Inter-chr q34.11 q11.2 5695 ChimerSeq FusionScan TCGA_RNA-Seq PTCD3-MPRIP PTCD3 chr2 86362110 + MPRIP chr17 17075031 + Exonic hg19 ESCA TCGA-VR-A8ER 2 Out-of-Frame Inter-chr p11.2 p11.2 5696 ChimerSeq FusionScan TCGA_RNA-Seq TXNRD1-CHST11 TXNRD1 chr12 104733051 + CHST11 chr12 104995683 + Exonic hg19 ESCA TCGA-VR-A8ER 2 Out-of-Frame Intra-chr q23.3 q23.3 Seq+ 5697 ChimerSeq FusionScan TCGA_RNA-Seq UBP1-TFCP2L1 UBP1 chr3 33453072 - TFCP2L1 chr2 122004546 - Exonic hg19 ESCA TCGA-VR-A8ER 2 In-Frame Inter-chr p22.3 Transcription factor q14.2 Transcription factor 5698 ChimerSeq FusionScan TCGA_RNA-Seq SNX5-MATN2 SNX5 chr20 17928129 - MATN2 chr8 98943180 + Exonic hg19 ESCA TCGA-VR-A8ER 2 In-Frame Inter-chr p11.23 q22.1 5699 ChimerSeq FusionScan TCGA_RNA-Seq TXNDC9-EIF5B TXNDC9 chr2 99938417 - EIF5B chr2 99976698 + Exonic hg19 ESCA TCGA-IG-A7DP 2 In-Frame Intra-chr q11.2 q11.2 5700 ChimerSeq FusionScan TCGA_RNA-Seq USP36-EXOSC9 USP36 chr17 76814748 - EXOSC9 chr4 122737523 + Exonic hg19 ESCA TCGA-IG-A7DP 2 Out-of-Frame Inter-chr q25.3 q27 5701 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-FLOT1 RCC1 chr1 28832596 + FLOT1 chr6 30695922 - Exonic hg19 ESCA TCGA-IG-A7DP 2 5'UTR-5'UTR Inter-chr p35.3 5702 ChimerSeq FusionScan TCGA_RNA-Seq PAPOLG-NRG1 PAPOLG chr2 61019424 + NRG1 chr8 32585466 + Exonic hg19 ESCA TCGA-IG-A7DP 2 Out-of-Frame Inter-chr p16.1 p12 5703 ChimerSeq FusionScan TCGA_RNA-Seq AKAP7-PRKCH AKAP7 chr6 131540948 + PRKCH chr14 61952219 + Exonic hg19 ESCA TCGA-IG-A7DP 2 Out-of-Frame Inter-chr q23.2 q23.1 5704 ChimerSeq FusionScan TCGA_RNA-Seq IP6K1-DAG1 IP6K1 chr3 49785250 - DAG1 chr3 49547851 + Exonic hg19 ESCA TCGA-IG-A7DP 2 CDS-5'UTR Intra-chr p21.31 p21.31 5705 ChimerSeq FusionScan TCGA_RNA-Seq PRDM2-PUM1 PRDM2 chr1 14075982 + PUM1 chr1 31426828 - Exonic hg19 ESCA TCGA-IG-A7DP 2 In-Frame Intra-chr p36.21 Tumor suppressor gene Transcription factor p35.2 5706 ChimerSeq FusionScan TCGA_RNA-Seq IGLL5-FBXW4 IGLL5 chr22 23230439 + FBXW4 chr10 103436193 - Exonic hg19 ESCA TCGA-IG-A7DP 2 In-Frame Inter-chr q11.22 q24.32 5707 ChimerSeq FusionScan TCGA_RNA-Seq CLASRP-GEMIN7 CLASRP chr19 45542366 + GEMIN7 chr19 45593364 + Exonic hg19 ESCA TCGA-IG-A50L 3 5'UTR-5'UTR Intra-chr q13.32 q13.32 5708 ChimerSeq FusionScan TCGA_RNA-Seq XPO1-TARS XPO1 chr2 61724013 - TARS chr5 33461262 + Exonic hg19 ESCA TCGA-IG-A50L 2 In-Frame Inter-chr p15 Oncogene p13.3 5709 ChimerSeq FusionScan TCGA_RNA-Seq ZNF217-MAVS ZNF217 chr20 52188259 - MAVS chr20 3841978 + Exonic hg19 ESCA TCGA-IG-A50L 2 3'UTR-CDS Intra-chr q13.2 Oncogene Transcription factor p13 Seq+ 5710 ChimerSeq FusionScan TCGA_RNA-Seq ZNF217-MAVS ZNF217 chr20 52188259 - MAVS chr20 3842900 + Exonic hg19 ESCA TCGA-IG-A50L 2 3'UTR-CDS Intra-chr q13.2 Oncogene Transcription factor p13 Seq+ 5711 ChimerSeq FusionScan TCGA_RNA-Seq TSPAN5-ADH5 TSPAN5 chr4 99428828 - ADH5 chr4 99998074 - Exonic hg19 ESCA TCGA-IG-A50L 2 Out-of-Frame Intra-chr q23 q23 5712 ChimerSeq FusionScan TCGA_RNA-Seq FBXW11-UIMC1 FBXW11 chr5 171433461 - UIMC1 chr5 176402481 - Exonic hg19 ESCA TCGA-IG-A50L 2 In-Frame Intra-chr q35.1 q35.2 Tumor suppressor gene 5713 ChimerSeq FusionScan TCGA_RNA-Seq DMBT1-ARMS2 DMBT1 chr10 124380896 + ARMS2 chr10 124216422 + Exonic hg19 ESCA TCGA-Q9-A6FW 4 Out-of-Frame Intra-chr q26.13 Tumor suppressor gene q26.13 Seq+ 5714 ChimerSeq FusionScan TCGA_RNA-Seq PLAU-C10orf55 PLAU chr10 75672856 + C10orf55 chr10 75672833 - Exonic hg19 ESCA TCGA-Q9-A6FW 2 CDS-5'UTR Intra-chr q22.2 q22.2 5715 ChimerSeq FusionScan TCGA_RNA-Seq GATA4-TRIB1 GATA4 chr8 11566437 + TRIB1 chr8 126448247 + Exonic hg19 ESCA TCGA-L5-A4OJ 4 Out-of-Frame Intra-chr p23.1 Tumor suppressor gene Transcription factor q24.13 Seq+ 5716 ChimerSeq FusionScan TCGA_RNA-Seq ST3GAL2-COG4 ST3GAL2 chr16 70472851 - COG4 chr16 70517872 - Exonic hg19 ESCA TCGA-L5-A4OJ 3 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 5717 ChimerSeq FusionScan TCGA_RNA-Seq SNHG8-PSPH SNHG8 chr4 119200292 + PSPH chr7 56079562 - Exonic hg19 ESCA TCGA-L5-A4OJ 2 5'UTR-CDS Inter-chr q26 p11.2 5718 ChimerSeq FusionScan TCGA_RNA-Seq EIF4G3-GBP2 EIF4G3 chr1 21377358 - GBP2 chr1 89575949 - Exonic hg19 ESCA TCGA-L5-A4OJ 2 5'UTR-CDS Intra-chr p36.12 p22.2 5719 ChimerSeq FusionScan TCGA_RNA-Seq ANXA2-TPM1 ANXA2 chr15 60690141 - TPM1 chr15 63349183 + Exonic hg19 ESCA TCGA-L5-A4OJ 2 5'UTR-CDS Intra-chr q22.2 q22.2 5720 ChimerSeq FusionScan TCGA_RNA-Seq CAPZA2-KCNK1 CAPZA2 chr7 116502704 + KCNK1 chr1 233802340 + Exonic hg19 ESCA TCGA-L5-A4OJ 2 Out-of-Frame Inter-chr q31.2 q42.2 5721 ChimerSeq FusionScan TCGA_RNA-Seq POLR1C-MRPS18A POLR1C chr6 43488786 + MRPS18A chr6 43639643 - Exonic hg19 ESCA TCGA-L5-A4OJ 2 In-Frame Intra-chr p21.1 p21.1 5722 ChimerSeq FusionScan TCGA_RNA-Seq ALG12-IL17REL ALG12 chr22 50303541 - IL17REL chr22 50447093 - Exonic hg19 ESCA TCGA-LN-A4MQ 5 CDS-5'UTR Intra-chr q13.33 q13.33 Seq+ 5723 ChimerSeq FusionScan TCGA_RNA-Seq CYP4F11-FAM95B1 CYP4F11 chr19 16038021 - FAM95B1 chr9 42470479 + Exonic hg19 ESCA TCGA-LN-A4MQ 4 CDS-5'UTR Inter-chr p13.12 p11.2 5724 ChimerSeq FusionScan TCGA_RNA-Seq MNT-SMG6 MNT chr17 2297336 - SMG6 chr17 2091809 - Exonic hg19 ESCA TCGA-LN-A4MQ 4 Out-of-Frame Intra-chr p13.3 Tumor suppressor gene Transcription factor p13.3 5725 ChimerSeq FusionScan TCGA_RNA-Seq SEPT2-RHOH SEPT2 chr2 242277205 + RHOH chr4 40244333 + Exonic hg19 ESCA TCGA-LN-A4MQ 3 CDS-5'UTR Inter-chr q37.3 p14 Oncogene Seq+ 5726 ChimerSeq FusionScan TCGA_RNA-Seq ZNF655-R3HDM1 ZNF655 chr7 99158318 + R3HDM1 chr2 136432901 + Exonic hg19 ESCA TCGA-LN-A4MQ 2 In-Frame Inter-chr q22.1 Transcription factor q21.3 5727 ChimerSeq FusionScan TCGA_RNA-Seq SDK1-FOXK1 SDK1 chr7 3861215 + FOXK1 chr7 4794089 + Exonic hg19 ESCA TCGA-LN-A4MQ 2 Out-of-Frame Intra-chr p22.2 p22.1 Transcription factor 5728 ChimerSeq FusionScan TCGA_RNA-Seq ROCK1-CHD2 ROCK1 chr18 18600111 - CHD2 chr15 93510554 + Exonic hg19 ESCA TCGA-LN-A4MQ 2 In-Frame Inter-chr q11.1 AGC:DMPK q26.1 5729 ChimerSeq FusionScan TCGA_RNA-Seq SMEK2-PTBP3 SMEK2 chr2 55842586 - PTBP3 chr9 115060196 - Exonic hg19 ESCA TCGA-LN-A4MQ 2 In-Frame Inter-chr q32 5730 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-ANXA13 PVT1 chr8 128806980 + ANXA13 chr8 124724993 - Exonic hg19 ESCA TCGA-JY-A6F8 9 5'UTR-CDS Intra-chr q24.21 q24.13 Seq+ 5731 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-ANXA13 PVT1 chr8 128806980 + ANXA13 chr8 124714976 - Exonic hg19 ESCA TCGA-JY-A6F8 7 5'UTR-CDS Intra-chr q24.21 q24.13 Seq+ 5732 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0247-SLC39A9 KIAA0247 chr14 70125430 + SLC39A9 chr14 69908785 + Exonic hg19 ESCA TCGA-JY-A6F8 4 In-Frame Intra-chr q24.1 Seq+ 5733 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0247-SLC39A9 KIAA0247 chr14 70170309 + SLC39A9 chr14 69908785 + Exonic hg19 ESCA TCGA-JY-A6F8 4 In-Frame Intra-chr q24.1 Seq+ 5734 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0247-SLC39A9 KIAA0247 chr14 70170309 + SLC39A9 chr14 69908548 + Exonic hg19 ESCA TCGA-JY-A6F8 3 CDS-5'UTR Intra-chr q24.1 Seq+ 5735 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-ICA1 RCC1 chr1 28834672 + ICA1 chr7 8183602 - Exonic hg19 ESCA TCGA-JY-A6F8 2 5'UTR-CDS Inter-chr p35.3 p21.3 Seq+ 5736 ChimerSeq FusionScan TCGA_RNA-Seq TMEM19-CD63 TMEM19 chr12 72083484 + CD63 chr12 56119680 - Exonic hg19 ESCA TCGA-JY-A6F8 2 Out-of-Frame Intra-chr q21.1 q13.2 5737 ChimerSeq FusionScan TCGA_RNA-Seq SRGAP2P2-OLFML2B SRGAP2P2 chr1 143916308 + OLFML2B chr1 161989972 - Exonic hg19 ESCA TCGA-JY-A6F8 2 5'UTR-CDS Intra-chr q23.3 5738 ChimerSeq FusionScan TCGA_RNA-Seq TYW1-C7orf42 TYW1 chr7 66483130 + C7orf42 chr7 66406834 + Exonic hg19 ESCA TCGA-JY-A6F8 2 CDS-5'UTR Intra-chr q11.21 Seq+ 5739 ChimerSeq FusionScan TCGA_RNA-Seq MYO1D-WAPAL MYO1D chr17 31065270 - WAPAL chr10 88233730 - Exonic hg19 ESCA TCGA-JY-A6F8 2 In-Frame Inter-chr q11.2 5740 ChimerSeq FusionScan TCGA_RNA-Seq RNF213-ZNF384 RNF213 chr17 78355527 + ZNF384 chr12 6797392 - Exonic hg19 ESCA TCGA-R6-A8WG 2 CDS-5'UTR Inter-chr q25.3 Oncogene p13.31 Oncogene Transcription factor 5741 ChimerSeq FusionScan TCGA_RNA-Seq ZDHHC17-TGIF1 ZDHHC17 chr12 77158109 + TGIF1 chr18 3456351 + Exonic hg19 ESCA TCGA-R6-A8WG 2 Out-of-Frame Inter-chr q21.2 p11.31 Transcription factor 5742 ChimerSeq FusionScan TCGA_RNA-Seq RNF123-CHMP2B RNF123 chr3 49751607 + CHMP2B chr3 87294863 + Exonic hg19 ESCA TCGA-R6-A8WG 2 Out-of-Frame Intra-chr p21.31 p11.2 Seq+ 5743 ChimerSeq FusionScan TCGA_RNA-Seq STT3B-GOLGA4 STT3B chr3 31617996 + GOLGA4 chr3 37402733 + Exonic hg19 ESCA TCGA-XP-A8T8 2 In-Frame Intra-chr p23 p22.2 5744 ChimerSeq FusionScan TCGA_RNA-Seq ERGIC3-RSL1D1 ERGIC3 chr20 34144042 + RSL1D1 chr16 11935677 - Exonic hg19 ESCA TCGA-XP-A8T8 2 In-Frame Inter-chr q11.22 p13.13 5745 ChimerSeq FusionScan TCGA_RNA-Seq PCMTD1-PXDNL PCMTD1 chr8 52773404 - PXDNL chr8 52567320 - Exonic hg19 GBM TCGA-06-0645 2 Out-of-Frame Intra-chr q11.23 q11.23 Seq+ 5746 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152498705 + Exonic hg19 GBM TCGA-06-0645 2 In-Frame Intra-chr q36.1 Seq+ 5747 ChimerSeq FusionScan TCGA_RNA-Seq CAPRIN1-RNF216 CAPRIN1 chr11 34074183 + RNF216 chr7 5681007 - Exonic hg19 GBM TCGA-12-0619 2 Out-of-Frame Inter-chr p13 p22.1 Seq+ 5748 ChimerSeq FusionScan TCGA_RNA-Seq RECK-UNC13B RECK chr9 36058898 + UNC13B chr9 35366943 + Exonic hg19 GBM TCGA-12-0619 2 In-Frame Intra-chr p13.3 Tumor suppressor gene p13.3 Seq+ 5749 ChimerSeq FusionScan TCGA_RNA-Seq RHBDD2-POR RHBDD2 chr7 75513166 + POR chr7 75583306 + Exonic hg19 GBM TCGA-12-0619 2 CDS-5'UTR Intra-chr q11.23 q11.23 5750 ChimerSeq FusionScan TCGA_RNA-Seq SCD5-HNRPDL SCD5 chr4 83719458 - HNRPDL chr4 83349599 - Exonic hg19 GBM TCGA-27-2521 2 Out-of-Frame Intra-chr q21.22 Seq+ 5751 ChimerSeq FusionScan TCGA_RNA-Seq PPM1H-RAP1B PPM1H chr12 63182005 - RAP1B chr12 69042478 + Exonic hg19 GBM TCGA-19-2624 9 CDS-5'UTR Intra-chr q14.2 q15 Seq+ 5752 ChimerSeq FusionScan TCGA_RNA-Seq EGFR-PPM1H EGFR chr7 55087058 + PPM1H chr12 63195940 - Exonic hg19 GBM TCGA-19-2624 7 Out-of-Frame Inter-chr p11.2 TK:EGFR Oncogene q14.2 Seq+ 5753 ChimerSeq FusionScan TCGA_RNA-Seq EGFR-GNS EGFR chr7 55240817 + GNS chr12 65110599 - Exonic hg19 GBM TCGA-19-2624 7 Out-of-Frame Inter-chr p11.2 TK:EGFR Oncogene q14.3 Seq+ 5754 ChimerSeq FusionScan TCGA_RNA-Seq MDM2-EGFR MDM2 chr12 69203072 + EGFR chr7 55231425 + Exonic hg19 GBM TCGA-19-2624 6 Out-of-Frame Inter-chr q15 Oncogene p11.2 TK:EGFR Oncogene Seq+ 5755 ChimerSeq FusionScan TCGA_RNA-Seq TSFM-NUP107 TSFM chr12 58186856 + NUP107 chr12 69103017 + Exonic hg19 GBM TCGA-19-2624 5 Out-of-Frame Intra-chr q14.1 q15 Seq+ 5756 ChimerSeq FusionScan TCGA_RNA-Seq MDM2-PPM1H MDM2 chr12 69230529 + PPM1H chr12 63195940 - Exonic hg19 GBM TCGA-19-2624 3 In-Frame Intra-chr q15 Oncogene q14.2 5757 ChimerSeq FusionScan TCGA_RNA-Seq LMO1-RIC3 LMO1 chr11 8248521 - RIC3 chr11 8161740 - Exonic hg19 GBM TCGA-19-2624 3 Out-of-Frame Intra-chr p15.4 p15.4 Seq+ 5758 ChimerSeq FusionScan TCGA_RNA-Seq LMO1-RIC3 LMO1 chr11 8248521 - RIC3 chr11 8174970 - Exonic hg19 GBM TCGA-19-2624 3 CDS-3'UTR Intra-chr p15.4 p15.4 Seq+ 5759 ChimerSeq FusionScan TCGA_RNA-Seq TSFM-NUP107 TSFM chr12 58180945 + NUP107 chr12 69103017 + Exonic hg19 GBM TCGA-19-2624 3 In-Frame Intra-chr q14.1 q15 Seq+ 5760 ChimerSeq FusionScan TCGA_RNA-Seq GNS-NUP107 GNS chr12 65130783 - NUP107 chr12 69121130 + Exonic hg19 GBM TCGA-19-2624 2 In-Frame Intra-chr q14.3 q15 Seq+ 5761 ChimerSeq FusionScan TCGA_RNA-Seq VOPP1-MDM2 VOPP1 chr7 55639963 - MDM2 chr12 69218142 + Exonic hg19 GBM TCGA-19-2624 2 Out-of-Frame Inter-chr p11.2 q15 Oncogene 5762 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D30-PPM1H TBC1D30 chr12 65232631 + PPM1H chr12 63226059 - Exonic hg19 GBM TCGA-19-2624 2 In-Frame Intra-chr q14.3 q14.2 Seq+ 5763 ChimerSeq FusionScan TCGA_RNA-Seq PPM1H-RAP1B PPM1H chr12 63182005 - RAP1B chr12 69044179 + Exonic hg19 GBM TCGA-19-2624 2 Out-of-Frame Intra-chr q14.2 q15 Seq+ 5764 ChimerSeq FusionScan TCGA_RNA-Seq MPV17L-SULT1A2 MPV17L chr16 15494714 + SULT1A2 chr16 28606785 - Exonic hg19 GBM TCGA-27-1832 2 Out-of-Frame Intra-chr p13.11 p11.2 5765 ChimerSeq FusionScan TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741428 + Exonic hg19 GBM TCGA-27-1832 2 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 5766 ChimerSeq FusionScan TCGA_RNA-Seq FKBP8-SLC1A6 FKBP8 chr19 18644079 - SLC1A6 chr19 15061202 - Exonic hg19 GBM TCGA-14-1034 6 Out-of-Frame Intra-chr p13.11 p13.12 Seq+ 5767 ChimerSeq FusionScan TCGA_RNA-Seq EIF4A1-PHOSPHO1 EIF4A1 chr17 7478576 + PHOSPHO1 chr17 47302493 - Exonic hg19 GBM TCGA-14-1034 3 CDS-5'UTR Intra-chr p13.1 q21.32 Seq+ 5768 ChimerSeq FusionScan TCGA_RNA-Seq ADAMTS17-LPAR1 ADAMTS17 chr15 100589061 - LPAR1 chr9 113638002 - Exonic hg19 GBM TCGA-14-1034 2 Out-of-Frame Inter-chr q26.3 q31.3 Seq+ 5769 ChimerSeq FusionScan TCGA_RNA-Seq TSFM-MX1 TSFM chr12 58186856 + MX1 chr21 42821063 + Exonic hg19 GBM TCGA-14-1034 2 In-Frame Inter-chr q14.1 q22.3 Seq+ 5770 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-KIF5A FRS2 chr12 69864310 + KIF5A chr12 57957221 + Exonic hg19 GBM TCGA-06-0129 6 5'UTR-CDS Intra-chr q15 q13.3 Seq+ 5771 ChimerSeq FusionScan TCGA_RNA-Seq DNAH8-TMEM217 DNAH8 chr6 38919296 + TMEM217 chr6 37180772 - Exonic hg19 GBM TCGA-06-0129 5 CDS-3'UTR Intra-chr p21.2 p21.2 Seq+ 5772 ChimerSeq FusionScan TCGA_RNA-Seq PCDHGC3-QKI PCDHGC3 chr5 140858113 + QKI chr6 163956013 + Exonic hg19 GBM TCGA-06-0129 5 In-Frame Inter-chr q31.3 Tumor suppressor gene q26 Seq+ 5773 ChimerSeq FusionScan TCGA_RNA-Seq CCDC167-CPNE5 CCDC167 chr6 37467597 - CPNE5 chr6 36733153 - Exonic hg19 GBM TCGA-06-0129 4 Out-of-Frame Intra-chr p21.2 p21.2 Seq+ 5774 ChimerSeq FusionScan TCGA_RNA-Seq ANKS1A-TFAP2D ANKS1A chr6 35021942 + TFAP2D chr6 50740357 + Exonic hg19 GBM TCGA-06-0129 4 Out-of-Frame Intra-chr p21.31 p12.3 Transcription factor Seq+ 5775 ChimerSeq FusionScan TCGA_RNA-Seq ZFAND3-DNAH8 ZFAND3 chr6 37897775 + DNAH8 chr6 38754540 + Exonic hg19 GBM TCGA-06-0129 4 In-Frame Intra-chr p21.2 p21.2 Seq+ 5776 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1033-LGR5 KIAA1033 chr12 105538650 + LGR5 chr12 71928894 + Exonic hg19 GBM TCGA-06-0129 3 Out-of-Frame Intra-chr q21.1 Seq+ 5777 ChimerSeq FusionScan TCGA_RNA-Seq C6orf106-ANKS1A C6orf106 chr6 34664222 - ANKS1A chr6 35021875 + Exonic hg19 GBM TCGA-06-0129 3 Out-of-Frame Intra-chr p21.31 p21.31 Seq+ 5778 ChimerSeq FusionScan TCGA_RNA-Seq SLC2A13-ANAPC7 SLC2A13 chr12 40345058 - ANAPC7 chr12 110834257 - Exonic hg19 GBM TCGA-06-0129 3 In-Frame Intra-chr q12 q24.11 Seq+ 5779 ChimerSeq FusionScan TCGA_RNA-Seq DIP2B-TAF8 DIP2B chr12 51128913 + TAF8 chr6 42019094 + Exonic hg19 GBM TCGA-06-0129 3 In-Frame Inter-chr q13.12 p21.1 Seq+ 5780 ChimerSeq FusionScan TCGA_RNA-Seq CAMKK2-NR2C1 CAMKK2 chr12 121682942 - NR2C1 chr12 95461167 - Exonic hg19 GBM TCGA-06-0129 3 CDS-5'UTR Intra-chr q24.31 q22 Transcription factor Seq+ 5781 ChimerSeq FusionScan TCGA_RNA-Seq PCBP2-UHRF1BP1L PCBP2 chr12 53861077 + UHRF1BP1L chr12 100482873 - Exonic hg19 GBM TCGA-06-0129 3 Out-of-Frame Intra-chr q13.13 q23.1 Seq+ 5782 ChimerSeq FusionScan TCGA_RNA-Seq COQ10A-USP5 COQ10A chr12 56663345 + USP5 chr12 6964564 + Exonic hg19 GBM TCGA-06-0129 3 In-Frame Intra-chr q13.3 p13.31 Seq+ 5783 ChimerSeq FusionScan TCGA_RNA-Seq NAA15-LPAR1 NAA15 chr4 140222985 + LPAR1 chr9 113638002 - Exonic hg19 GBM TCGA-06-0129 3 Out-of-Frame Inter-chr q31.1 q31.3 Seq+ 5784 ChimerSeq FusionScan TCGA_RNA-Seq MDGA1-PTK7 MDGA1 chr6 37623475 - PTK7 chr6 43126554 + Exonic hg19 GBM TCGA-06-0129 2 In-Frame Intra-chr p21.2 p21.1 Seq+ 5785 ChimerSeq FusionScan TCGA_RNA-Seq NOC4L-SDS NOC4L chr12 132629150 + SDS chr12 113837515 - Exonic hg19 GBM TCGA-06-0129 2 CDS-5'UTR Intra-chr q24.33 q24.13 Seq+ 5786 ChimerSeq FusionScan TCGA_RNA-Seq LRFN2-BYSL LRFN2 chr6 40399452 - BYSL chr6 41898372 + Exonic hg19 GBM TCGA-06-0129 2 Out-of-Frame Intra-chr p21.1 p21.1 5787 ChimerSeq FusionScan TCGA_RNA-Seq TFEB-DIP2B TFEB chr6 41703883 - DIP2B chr12 51116984 + Exonic hg19 GBM TCGA-06-0129 2 5'UTR-CDS Inter-chr p21.1 Transcription factor q13.12 Seq+ 5788 ChimerSeq FusionScan TCGA_RNA-Seq PPIL1-PGC PPIL1 chr6 36824361 - PGC chr6 41710227 - Exonic hg19 GBM TCGA-06-0129 2 Out-of-Frame Intra-chr p21.2 p21.1 Seq+ 5789 ChimerSeq FusionScan TCGA_RNA-Seq NOC4L-SDS NOC4L chr12 132630210 + SDS chr12 113837515 - Exonic hg19 GBM TCGA-06-0129 2 CDS-5'UTR Intra-chr q24.33 q24.13 Seq+ 5790 ChimerSeq FusionScan TCGA_RNA-Seq KRBOX1-FAM198A KRBOX1 chr3 42983563 + FAM198A chr3 43073758 + Exonic hg19 GBM TCGA-06-0646 2 Out-of-Frame Intra-chr p22.1 p22.1 Seq+ 5791 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152480271 + Exonic hg19 GBM TCGA-32-2638 2 Out-of-Frame Intra-chr q36.1 Seq+ 5792 ChimerSeq FusionScan TCGA_RNA-Seq MED15-COMT MED15 chr22 20891491 + COMT chr22 19948721 + Exonic hg19 GBM TCGA-32-2638 2 CDS-5'UTR Intra-chr q11.21 q11.21 Seq+ 5793 ChimerSeq FusionScan TCGA_RNA-Seq RAP1B-CTDSP2 RAP1B chr12 69004823 + CTDSP2 chr12 58223379 - Exonic hg19 GBM TCGA-26-5135 3 5'UTR-CDS Intra-chr q15 q14.1 Seq+ 5794 ChimerSeq FusionScan TCGA_RNA-Seq RAP1B-CTDSP2 RAP1B chr12 69004832 + CTDSP2 chr12 58223379 - Exonic hg19 GBM TCGA-26-5135 2 5'UTR-CDS Intra-chr q15 q14.1 Seq+ 5795 ChimerSeq FusionScan TCGA_RNA-Seq MDM1-PTPRR MDM1 chr12 68724886 - PTPRR chr12 71158558 - Exonic hg19 GBM TCGA-26-5135 2 Out-of-Frame Intra-chr q15 q15 Seq+ 5796 ChimerSeq FusionScan TCGA_RNA-Seq ST7-CAV1 ST7 chr7 116593745 + CAV1 chr7 116198999 + Exonic hg19 GBM TCGA-06-0184 10 Out-of-Frame Intra-chr q31.2 Tumor suppressor gene q31.2 Tumor suppressor gene Seq+ 5797 ChimerSeq FusionScan TCGA_RNA-Seq SRRT-PPP1R17 SRRT chr7 100479862 + PPP1R17 chr7 31732019 + Exonic hg19 GBM TCGA-06-0184 2 CDS-5'UTR Intra-chr q22.1 p14.3 Seq+ 5798 ChimerSeq FusionScan TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741428 + Exonic hg19 GBM TCGA-06-2570 2 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 5799 ChimerSeq FusionScan TCGA_RNA-Seq NUDT2-GLIPR2 NUDT2 chr9 34339164 + GLIPR2 chr9 36162358 + Exonic hg19 GBM TCGA-27-2523 2 In-Frame Intra-chr p13.3 p13.3 Seq+ 5800 ChimerSeq FusionScan TCGA_RNA-Seq DLG1-EHHADH DLG1 chr3 196863412 - EHHADH chr3 184966305 - Exonic hg19 GBM TCGA-27-2523 2 Out-of-Frame Intra-chr q29 Tumor suppressor gene q27.2 Seq+ 5801 ChimerSeq FusionScan TCGA_RNA-Seq EIF3K-ACTN4 EIF3K chr19 39125758 + ACTN4 chr19 39191239 + Exonic hg19 GBM TCGA-27-2523 2 Out-of-Frame Intra-chr 5802 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152498705 + Exonic hg19 GBM TCGA-27-2523 2 In-Frame Intra-chr q36.1 Seq+ 5803 ChimerSeq FusionScan TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1739324 + Exonic hg19 GBM TCGA-76-4925 11 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 5804 ChimerSeq FusionScan TCGA_RNA-Seq SRP68-AP1M2 SRP68 chr17 74046508 - AP1M2 chr19 10694746 - Exonic hg19 GBM TCGA-76-4925 3 In-Frame Inter-chr q25.1 p13.2 Seq+ 5805 ChimerSeq FusionScan TCGA_RNA-Seq RAP1B-CPM RAP1B chr12 69004823 + CPM chr12 69326620 - Exonic hg19 GBM TCGA-06-0686 6 5'UTR-5'UTR Intra-chr q15 q15 Seq+ 5806 ChimerSeq FusionScan TCGA_RNA-Seq LRP1-XPO5 LRP1 chr12 57539273 + XPO5 chr6 43530083 - Exonic hg19 GBM TCGA-06-0686 3 Out-of-Frame Inter-chr q13.3 p21.1 Tumor suppressor gene Seq+ 5807 ChimerSeq FusionScan TCGA_RNA-Seq RAP1B-CPM RAP1B chr12 69004832 + CPM chr12 69326620 - Exonic hg19 GBM TCGA-06-0686 3 5'UTR-5'UTR Intra-chr q15 q15 Seq+ 5808 ChimerSeq FusionScan TCGA_RNA-Seq RAP1B-CPM RAP1B chr12 69004823 + CPM chr12 69279669 - Exonic hg19 GBM TCGA-06-0686 2 5'UTR-CDS Intra-chr q15 q15 Seq+ 5809 ChimerSeq FusionScan TCGA_RNA-Seq CTNNBIP1-CLSTN1 CTNNBIP1 chr1 9931244 - CLSTN1 chr1 9833452 - Exonic hg19 GBM TCGA-02-0047 2 In-Frame Intra-chr p36.22 Tumor suppressor gene p36.22 Seq+ 5810 ChimerSeq FusionScan TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741428 + Exonic hg19 GBM TCGA-14-1825 2 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 5811 ChimerSeq FusionScan TCGA_RNA-Seq MTERF-VOPP1 MTERF chr7 91509970 - VOPP1 chr7 55540738 - Exonic hg19 GBM TCGA-14-1823 4 5'UTR-CDS Intra-chr p11.2 Seq+ 5812 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152480271 + Exonic hg19 GBM TCGA-14-1823 2 Out-of-Frame Intra-chr q36.1 Seq+ 5813 ChimerSeq FusionScan TCGA_RNA-Seq OTUD7A-ASCC3 OTUD7A chr15 31862220 - ASCC3 chr6 100988263 - Exonic hg19 GBM TCGA-27-2526 2 Out-of-Frame Inter-chr q13.3 q16.3 Seq+ 5814 ChimerSeq FusionScan TCGA_RNA-Seq ATP9A-PICALM ATP9A chr20 50312631 - PICALM chr11 85742653 - Exonic hg19 GBM TCGA-27-2526 2 In-Frame Inter-chr q13.2 q14.2 Seq+ 5815 ChimerSeq FusionScan TCGA_RNA-Seq BCAN-NTRK1 BCAN chr1 156628525 + NTRK1 chr1 156844697 + Exonic hg19 GBM TCGA-19-2619 12 In-Frame Intra-chr q23.1 q23.1 Oncogene Seq+ 5816 ChimerSeq FusionScan TCGA_RNA-Seq NUCKS1-PM20D1 NUCKS1 chr1 205719084 - PM20D1 chr1 205811017 - Exonic hg19 GBM TCGA-19-2619 7 In-Frame Intra-chr q32.1 q32.1 Seq+ 5817 ChimerSeq FusionScan TCGA_RNA-Seq AGTRAP-VPS13D AGTRAP chr1 11796292 + VPS13D chr1 12516053 + Exonic hg19 GBM TCGA-19-2619 2 In-Frame Intra-chr p36.22 p36.22 Seq+ 5818 ChimerSeq FusionScan TCGA_RNA-Seq LANCL2-SEPT14 LANCL2 chr7 55479782 + SEPT14 chr7 55886916 - Exonic hg19 GBM TCGA-06-0211 15 In-Frame Intra-chr p11.2 p11.2 Seq+ 5819 ChimerSeq FusionScan TCGA_RNA-Seq GNG7-SGTA GNG7 chr19 2702643 - SGTA chr19 2769089 - Exonic hg19 GBM TCGA-14-1402 4 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 5820 ChimerSeq FusionScan TCGA_RNA-Seq RHEB-PRKAG2 RHEB chr7 151216545 - PRKAG2 chr7 151329224 - Exonic hg19 GBM TCGA-14-1402 2 Out-of-Frame Intra-chr q36.1 Oncogene q36.1 Seq+ 5821 ChimerSeq FusionScan TCGA_RNA-Seq HOPX-PDCL2 HOPX chr4 57547420 - PDCL2 chr4 56448404 - Exonic hg19 GBM TCGA-06-2559 8 5'UTR-CDS Intra-chr q12 Tumor suppressor gene q12 Seq+ 5822 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1211-NMU KIAA1211 chr4 57045596 + NMU chr4 56496627 - Exonic hg19 GBM TCGA-06-2559 4 5'UTR-CDS Intra-chr q12 q12 Seq+ 5823 ChimerSeq FusionScan TCGA_RNA-Seq AASDH-LRRC66 AASDH chr4 57217507 - LRRC66 chr4 52864103 - Exonic hg19 GBM TCGA-06-2559 3 In-Frame Intra-chr q12 q12 Seq+ 5824 ChimerSeq FusionScan TCGA_RNA-Seq TMEM165-PDGFRA TMEM165 chr4 56262563 + PDGFRA chr4 55133455 + Exonic hg19 GBM TCGA-06-2559 2 In-Frame Intra-chr q12 q12 Oncogene Seq+ 5825 ChimerSeq FusionScan TCGA_RNA-Seq CTDSP2-DCUN1D4 CTDSP2 chr12 58240154 - DCUN1D4 chr4 52765435 + Exonic hg19 GBM TCGA-06-2559 2 Out-of-Frame Inter-chr q14.1 q12 Seq+ 5826 ChimerSeq FusionScan TCGA_RNA-Seq SLIT1-SFRP5 SLIT1 chr10 98790513 - SFRP5 chr10 99527617 - Exonic hg19 GBM TCGA-12-5299 9 Out-of-Frame Intra-chr q24.1 q24.2 Tumor suppressor gene Seq+ 5827 ChimerSeq FusionScan TCGA_RNA-Seq MTOR-CAMTA1 MTOR chr1 11313895 - CAMTA1 chr1 6880240 + Exonic hg19 GBM TCGA-32-5222 3 In-Frame Intra-chr p36.22 Oncogene p36.31 Tumor suppressor gene Transcription factor Seq+ 5828 ChimerSeq FusionScan TCGA_RNA-Seq GIGYF2-THAP4 GIGYF2 chr2 233562102 + THAP4 chr2 242573494 - Exonic hg19 GBM TCGA-28-2499 2 5'UTR-CDS Intra-chr q37.1 q37.3 Transcription factor Seq+ 5829 ChimerSeq FusionScan TCGA_RNA-Seq DGKD-SPP2 DGKD chr2 234299129 + SPP2 chr2 234967479 + Exonic hg19 GBM TCGA-28-2499 2 In-Frame Intra-chr q37.1 Seq+ 5830 ChimerSeq FusionScan TCGA_RNA-Seq AHDC1-WASF2 AHDC1 chr1 27929907 - WASF2 chr1 27755443 - Exonic hg19 GBM TCGA-28-2499 2 5'UTR-5'UTR Intra-chr p35.3 Transcription factor p36.11 Seq+ 5831 ChimerSeq FusionScan TCGA_RNA-Seq LRP5-ATG16L2 LRP5 chr11 68207384 + ATG16L2 chr11 72539403 + Exonic hg19 GBM TCGA-06-2561 2 Out-of-Frame Intra-chr q13.2 q13.4 Seq+ 5832 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152498705 + Exonic hg19 GBM TCGA-02-2485 2 In-Frame Intra-chr q36.1 Seq+ 5833 ChimerSeq FusionScan TCGA_RNA-Seq ZNF610-RALA ZNF610 chr19 52839759 + RALA chr7 39745721 + Exonic hg19 GBM TCGA-32-1970 6 5'UTR-CDS Inter-chr q13.41 Transcription factor p14.1 Seq+ 5834 ChimerSeq FusionScan TCGA_RNA-Seq HIBADH-C7orf10 HIBADH chr7 27668989 - C7orf10 chr7 40789032 + Exonic hg19 GBM TCGA-32-1970 4 Out-of-Frame Intra-chr p15.2 Seq+ 5835 ChimerSeq FusionScan TCGA_RNA-Seq JAZF1-CPT1C JAZF1 chr7 28220081 - CPT1C chr19 50211979 + Exonic hg19 GBM TCGA-32-1970 3 Out-of-Frame Inter-chr p15.1 Transcription factor q13.33 Seq+ 5836 ChimerSeq FusionScan TCGA_RNA-Seq ELMO1-BLVRA ELMO1 chr7 37488277 - BLVRA chr7 43810736 + Exonic hg19 GBM TCGA-32-1970 3 5'UTR-5'UTR Intra-chr p14.1 p13 Seq+ 5837 ChimerSeq FusionScan TCGA_RNA-Seq RHPN2-CHN2 RHPN2 chr19 33481419 - CHN2 chr7 29394240 + Exonic hg19 GBM TCGA-32-1970 2 Out-of-Frame Inter-chr q13.11 p14.3 Seq+ 5838 ChimerSeq FusionScan TCGA_RNA-Seq ZNF419-SNRPD2 ZNF419 chr19 58002965 + SNRPD2 chr19 46190985 - Exonic hg19 GBM TCGA-32-1970 2 Out-of-Frame Intra-chr q13.43 Transcription factor q13.32 Seq+ 5839 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHO2-ANKDD1A PLEKHO2 chr15 65153774 + ANKDD1A chr15 65214119 + Exonic hg19 GBM TCGA-32-1970 2 In-Frame Intra-chr q22.31 q22.31 5840 ChimerSeq FusionScan TCGA_RNA-Seq KRBOX1-FAM198A KRBOX1 chr3 42983563 + FAM198A chr3 43073758 + Exonic hg19 GBM TCGA-32-1970 2 Out-of-Frame Intra-chr p22.1 p22.1 Seq+ 5841 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152498705 + Exonic hg19 GBM TCGA-06-2558 2 In-Frame Intra-chr q36.1 Seq+ 5842 ChimerSeq FusionScan TCGA_RNA-Seq NFASC-PRELP NFASC chr1 204797910 + PRELP chr1 203452296 + Exonic hg19 GBM TCGA-06-0210 6 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 5843 ChimerSeq FusionScan TCGA_RNA-Seq C7orf44-HECW1 C7orf44 chr7 43769027 - HECW1 chr7 43580761 + Exonic hg19 GBM TCGA-06-0210 3 5'UTR-CDS Intra-chr p14.1 Seq+ 5844 ChimerSeq FusionScan TCGA_RNA-Seq ZC3H18-CHMP1A ZC3H18 chr16 88636974 + CHMP1A chr16 89713739 - Exonic hg19 GBM TCGA-06-0210 3 5'UTR-CDS Intra-chr q24.2 q24.3 Seq+ 5845 ChimerSeq FusionScan TCGA_RNA-Seq B4GALT1-SMU1 B4GALT1 chr9 33135186 - SMU1 chr9 33068932 - Exonic hg19 GBM TCGA-32-2616 2 In-Frame Intra-chr p21.1 p21.1 5846 ChimerSeq FusionScan TCGA_RNA-Seq CARD8-SULT2B1 CARD8 chr19 48752779 - SULT2B1 chr19 49099995 + Exonic hg19 GBM TCGA-06-5415 12 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 5847 ChimerSeq FusionScan TCGA_RNA-Seq UBXN7-RPL39L UBXN7 chr3 196159197 - RPL39L chr3 186845850 - Exonic hg19 GBM TCGA-06-5415 11 CDS-5'UTR Intra-chr q29 q27.3 Seq+ 5848 ChimerSeq FusionScan TCGA_RNA-Seq TXNDC15-ARPC2 TXNDC15 chr5 134210220 + ARPC2 chr2 219103386 + Exonic hg19 GBM TCGA-06-5415 4 In-Frame Inter-chr q31.1 q35 Seq+ 5849 ChimerSeq FusionScan TCGA_RNA-Seq CARD8-SULT2B1 CARD8 chr19 48753007 - SULT2B1 chr19 49099995 + Exonic hg19 GBM TCGA-06-5415 4 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 5850 ChimerSeq FusionScan TCGA_RNA-Seq RPL36-TTYH1 RPL36 chr19 5690611 + TTYH1 chr19 54946721 + Exonic hg19 GBM TCGA-06-5415 4 In-Frame Intra-chr p13.3 Seq+ 5851 ChimerSeq FusionScan TCGA_RNA-Seq APBA2-CHD4 APBA2 chr15 29213952 + CHD4 chr12 6710932 - Exonic hg19 GBM TCGA-06-5415 2 5'UTR-CDS Inter-chr p13.31 Seq+ 5852 ChimerSeq FusionScan TCGA_RNA-Seq LRRN2-LEMD1 LRRN2 chr1 204654447 - LEMD1 chr1 205389702 - Exonic hg19 GBM TCGA-06-5415 2 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 5853 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP21-ENKUR ARHGAP21 chr10 24955913 - ENKUR chr10 25284798 - Exonic hg19 GBM TCGA-06-5415 2 In-Frame Intra-chr p12.1 p12.1 Seq+ 5854 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152498705 + Exonic hg19 GBM TCGA-06-5415 2 In-Frame Intra-chr q36.1 Seq+ 5855 ChimerSeq FusionScan TCGA_RNA-Seq UBXN7-RPL39L UBXN7 chr3 196159197 - RPL39L chr3 186839116 - Exonic hg19 GBM TCGA-06-5415 2 CDS-5'UTR Intra-chr q29 q27.3 Seq+ 5856 ChimerSeq FusionScan TCGA_RNA-Seq RREB1-EEF1E1 RREB1 chr6 7108293 + EEF1E1 chr6 8097700 - Exonic hg19 GBM TCGA-06-5412 2 5'UTR-CDS Intra-chr p24.3 Transcription factor p24.3 Tumor suppressor gene Seq+ 5857 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152480271 + Exonic hg19 GBM TCGA-06-5412 2 Out-of-Frame Intra-chr q36.1 Seq+ 5858 ChimerSeq FusionScan TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741428 + Exonic hg19 GBM TCGA-27-1837 2 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 5859 ChimerSeq FusionScan TCGA_RNA-Seq ASTN2-ARHGDIG ASTN2 chr9 119976636 - ARHGDIG chr16 332024 + Exonic hg19 GBM TCGA-02-2483 4 In-Frame Inter-chr q33.1 p13.3 Seq+ 5860 ChimerSeq FusionScan TCGA_RNA-Seq LHPP-FANK1 LHPP chr10 126205840 + FANK1 chr10 127668729 + Exonic hg19 GBM TCGA-02-2483 3 Out-of-Frame Intra-chr q26.13 q26.2 Seq+ 5861 ChimerSeq FusionScan TCGA_RNA-Seq ZNF626-ALG8 ZNF626 chr19 20844249 - ALG8 chr11 77820627 - Exonic hg19 GBM TCGA-02-2483 2 Out-of-Frame Inter-chr p12 Transcription factor q14.1 Seq+ 5862 ChimerSeq FusionScan TCGA_RNA-Seq CSNK2A1-SMARCA2 CSNK2A1 chr20 524315 - SMARCA2 chr9 2028986 + Exonic hg19 GBM TCGA-02-2483 2 5'UTR-5'UTR Inter-chr p13 Oncogene p24.3 Tumor suppressor gene Seq+ 5863 ChimerSeq FusionScan TCGA_RNA-Seq PPP2CA-SKP1 PPP2CA chr5 133561450 - SKP1 chr5 133509713 - Exonic hg19 GBM TCGA-32-1980 2 CDS-5'UTR Intra-chr q31.1 Tumor suppressor gene q31.1 5864 ChimerSeq FusionScan TCGA_RNA-Seq FKBP8-SLC1A6 FKBP8 chr19 18644079 - SLC1A6 chr19 15061202 - Exonic hg19 GBM TCGA-14-1034 6 Out-of-Frame Intra-chr p13.11 p13.12 Seq+ 5865 ChimerSeq FusionScan TCGA_RNA-Seq EIF4A1-PHOSPHO1 EIF4A1 chr17 7478576 + PHOSPHO1 chr17 47302366 - Exonic hg19 GBM TCGA-14-1034 3 In-Frame Intra-chr p13.1 q21.32 Seq+ 5866 ChimerSeq FusionScan TCGA_RNA-Seq EIF4A1-PHOSPHO1 EIF4A1 chr17 7478576 + PHOSPHO1 chr17 47302493 - Exonic hg19 GBM TCGA-14-1034 2 CDS-5'UTR Intra-chr p13.1 q21.32 Seq+ 5867 ChimerSeq FusionScan TCGA_RNA-Seq AKAP6-EGLN3 AKAP6 chr14 32903023 + EGLN3 chr14 34400421 - Exonic hg19 GBM TCGA-06-5413 9 In-Frame Intra-chr q12 q13.1 Tumor suppressor gene Seq+ 5868 ChimerSeq FusionScan TCGA_RNA-Seq MRC2-RND2 MRC2 chr17 60705281 + RND2 chr17 41177976 + Exonic hg19 GBM TCGA-27-2524 7 Out-of-Frame Intra-chr q23.2 q21.31 Seq+ 5869 ChimerSeq FusionScan TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741428 + Exonic hg19 GBM TCGA-27-1835 21 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 5870 ChimerSeq FusionScan TCGA_RNA-Seq C6orf228-TTLL5 C6orf228 chr6 11094622 + TTLL5 chr14 76184203 + Exonic hg19 GBM TCGA-27-1835 2 Out-of-Frame Inter-chr q24.3 5871 ChimerSeq FusionScan TCGA_RNA-Seq SPRED2-G2E3 SPRED2 chr2 65659095 - G2E3 chr14 31050281 + Exonic hg19 GBM TCGA-28-2514 5 CDS-5'UTR Inter-chr p14 q12 Seq+ 5872 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152498705 + Exonic hg19 GBM TCGA-28-2514 2 In-Frame Intra-chr q36.1 Seq+ 5873 ChimerSeq FusionScan TCGA_RNA-Seq SNX6-CD8B SNX6 chr14 35062250 - CD8B chr2 87085539 - Exonic hg19 GBM TCGA-28-2514 2 In-Frame Inter-chr q13.1 p11.2 Seq+ 5874 ChimerSeq FusionScan TCGA_RNA-Seq CTNNBIP1-CLSTN1 CTNNBIP1 chr1 9931244 - CLSTN1 chr1 9833452 - Exonic hg19 GBM TCGA-28-2514 2 In-Frame Intra-chr p36.22 Tumor suppressor gene p36.22 Seq+ 5875 ChimerSeq FusionScan TCGA_RNA-Seq ARID1A-BEND5 ARID1A chr1 27024031 + BEND5 chr1 49202124 - Exonic hg19 GBM TCGA-28-2514 2 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p33 Seq+ 5876 ChimerSeq FusionScan TCGA_RNA-Seq C14orf178-ADCK1 C14orf178 chr14 78227459 + ADCK1 chr14 78285310 + Exonic hg19 GBM TCGA-06-5858 2 5'UTR-5'UTR Intra-chr q24.3 q24.3 Atypical:ABC1 5877 ChimerSeq FusionScan TCGA_RNA-Seq CTNNBIP1-CLSTN1 CTNNBIP1 chr1 9931244 - CLSTN1 chr1 9833452 - Exonic hg19 GBM TCGA-06-5418 2 In-Frame Intra-chr p36.22 Tumor suppressor gene p36.22 Seq+ 5878 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHO2-ANKDD1A PLEKHO2 chr15 65153774 + ANKDD1A chr15 65223019 + Exonic hg19 GBM TCGA-06-5418 2 In-Frame Intra-chr q22.31 q22.31 5879 ChimerSeq FusionScan TCGA_RNA-Seq CTNNBIP1-CLSTN1 CTNNBIP1 chr1 9931244 - CLSTN1 chr1 9833452 - Exonic hg19 GBM TCGA-28-2510 2 In-Frame Intra-chr p36.22 Tumor suppressor gene p36.22 Seq+ 5880 ChimerSeq FusionScan TCGA_RNA-Seq NFASC-NTRK1 NFASC chr1 204951148 + NTRK1 chr1 156844362 + Exonic hg19 GBM TCGA-06-5411 15 In-Frame Intra-chr q32.1 q23.1 Oncogene Seq+ 5881 ChimerSeq FusionScan TCGA_RNA-Seq ATP2B4-NFASC ATP2B4 chr1 203596347 + NFASC chr1 204889759 + Exonic hg19 GBM TCGA-06-5411 3 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 5882 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHO2-ANKDD1A PLEKHO2 chr15 65153774 + ANKDD1A chr15 65214119 + Exonic hg19 GBM TCGA-06-5411 2 In-Frame Intra-chr q22.31 q22.31 5883 ChimerSeq FusionScan TCGA_RNA-Seq CLIC4-SRRM1 CLIC4 chr1 25140710 + SRRM1 chr1 24972474 + Exonic hg19 GBM TCGA-06-2565 3 Out-of-Frame Intra-chr p36.11 p36.11 Seq+ 5884 ChimerSeq FusionScan TCGA_RNA-Seq LMO1-RIC3 LMO1 chr11 8248521 - RIC3 chr11 8161740 - Exonic hg19 GBM TCGA-06-2565 2 Out-of-Frame Intra-chr p15.4 p15.4 Seq+ 5885 ChimerSeq FusionScan TCGA_RNA-Seq YEATS4-XRCC6BP1 YEATS4 chr12 69764755 + XRCC6BP1 chr12 58339410 + Exonic hg19 GBM TCGA-06-0138 16 In-Frame Intra-chr q15 Seq+ 5886 ChimerSeq FusionScan TCGA_RNA-Seq YEATS4-MARS YEATS4 chr12 69764755 + MARS chr12 57905480 + Exonic hg19 GBM TCGA-06-0138 6 Out-of-Frame Intra-chr q15 q13.3 Seq+ 5887 ChimerSeq FusionScan TCGA_RNA-Seq SLC35E3-OS9 SLC35E3 chr12 69145970 + OS9 chr12 58109542 + Exonic hg19 GBM TCGA-06-0138 5 In-Frame Intra-chr q15 q13.3 Seq+ 5888 ChimerSeq FusionScan TCGA_RNA-Seq METTL21B-CPM METTL21B chr12 58166911 + CPM chr12 69326620 - Exonic hg19 GBM TCGA-06-0138 3 CDS-5'UTR Intra-chr q15 Seq+ 5889 ChimerSeq FusionScan TCGA_RNA-Seq METTL21B-LYZ METTL21B chr12 58166911 + LYZ chr12 69743887 + Exonic hg19 GBM TCGA-06-0138 2 In-Frame Intra-chr q15 Seq+ 5890 ChimerSeq FusionScan TCGA_RNA-Seq CPM-LYZ CPM chr12 69326457 - LYZ chr12 69743887 + Exonic hg19 GBM TCGA-06-0138 2 In-Frame Intra-chr q15 q15 Seq+ 5891 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152498705 + Exonic hg19 GBM TCGA-41-2572 3 In-Frame Intra-chr q36.1 Seq+ 5892 ChimerSeq FusionScan TCGA_RNA-Seq AP1B1-SGSM3 AP1B1 chr22 29734978 - SGSM3 chr22 40796699 + Exonic hg19 GBM TCGA-41-2572 3 CDS-5'UTR Intra-chr q12.2 q13.1 Seq+ 5893 ChimerSeq FusionScan TCGA_RNA-Seq SP3-PRCP SP3 chr2 174819600 - PRCP chr11 82564320 - Exonic hg19 GBM TCGA-41-2572 2 Out-of-Frame Inter-chr q31.1 Transcription factor q14.1 Seq+ 5894 ChimerSeq FusionScan TCGA_RNA-Seq EML4-CASK EML4 chr2 42396776 + CASK chrX 41420897 - Exonic hg19 GBM TCGA-06-0158 4 In-Frame Inter-chr p21 Oncogene p11.4 CAMK:CASK Seq+ 5895 ChimerSeq FusionScan TCGA_RNA-Seq EIF3K-ACTN4 EIF3K chr19 39116742 + ACTN4 chr19 39191239 + Exonic hg19 GBM TCGA-06-0158 2 In-Frame Intra-chr 5896 ChimerSeq FusionScan TCGA_RNA-Seq AAK1-YIPF1 AAK1 chr2 69870009 - YIPF1 chr1 54325826 - Exonic hg19 GBM TCGA-28-5213 3 Out-of-Frame Inter-chr p13.3 Other:NAK p32.3 Seq+ 5897 ChimerSeq FusionScan TCGA_RNA-Seq MRPL50-ERP44 MRPL50 chr9 104160782 - ERP44 chr9 102822454 - Exonic hg19 GBM TCGA-06-0744 4 Out-of-Frame Intra-chr q31.1 q31.1 Seq+ 5898 ChimerSeq FusionScan TCGA_RNA-Seq EGFR-SEC61G EGFR chr7 55087058 + SEC61G chr7 54825287 - Exonic hg19 GBM TCGA-06-0744 3 CDS-5'UTR Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 5899 ChimerSeq FusionScan TCGA_RNA-Seq FAM219A-POLN FAM219A chr9 34458201 - POLN chr4 2097660 - Exonic hg19 GBM TCGA-06-0744 2 Out-of-Frame Inter-chr p13.3 p16.3 Seq+ 5900 ChimerSeq FusionScan TCGA_RNA-Seq EGFR-ERP44 EGFR chr7 55087058 + ERP44 chr9 102784508 - Exonic hg19 GBM TCGA-06-0744 2 In-Frame Inter-chr p11.2 TK:EGFR Oncogene q31.1 Seq+ 5901 ChimerSeq FusionScan TCGA_RNA-Seq OS9-KIF5A OS9 chr12 58090156 + KIF5A chr12 57960908 + Exonic hg19 GBM TCGA-41-5651 3 In-Frame Intra-chr q13.3 q13.3 Seq+ 5902 ChimerSeq FusionScan TCGA_RNA-Seq TSFM-INHBE TSFM chr12 58186856 + INHBE chr12 57849876 + Exonic hg19 GBM TCGA-41-5651 3 In-Frame Intra-chr q14.1 q13.3 Seq+ 5903 ChimerSeq FusionScan TCGA_RNA-Seq ADAM17-YWHAQ ADAM17 chr2 9675962 - YWHAQ chr2 9731644 - Exonic hg19 GBM TCGA-76-4929 3 In-Frame Intra-chr p25.1 p25.1 Seq+ 5904 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-DTX3 FRS2 chr12 69864310 + DTX3 chr12 58002302 + Exonic hg19 GBM TCGA-41-2571 13 5'UTR-CDS Intra-chr q15 q13.3 Seq+ 5905 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-DTX3 FRS2 chr12 69864310 + DTX3 chr12 58002859 + Exonic hg19 GBM TCGA-41-2571 10 5'UTR-CDS Intra-chr q15 q13.3 Seq+ 5906 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-RAB3IP FRS2 chr12 69925836 + RAB3IP chr12 70178499 + Exonic hg19 GBM TCGA-41-2571 10 5'UTR-5'UTR Intra-chr q15 q15 Seq+ 5907 ChimerSeq FusionScan TCGA_RNA-Seq CTDSP2-C12orf10 CTDSP2 chr12 58240154 - C12orf10 chr12 53699691 + Exonic hg19 GBM TCGA-41-2571 8 Out-of-Frame Intra-chr q14.1 q13.13 Seq+ 5908 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-RAB3IP FRS2 chr12 69931763 + RAB3IP chr12 70178499 + Exonic hg19 GBM TCGA-41-2571 6 5'UTR-5'UTR Intra-chr q15 q15 Seq+ 5909 ChimerSeq FusionScan TCGA_RNA-Seq USP15-PCBP2 USP15 chr12 62654284 + PCBP2 chr12 53848509 + Exonic hg19 GBM TCGA-41-2571 5 CDS-5'UTR Intra-chr q14.1 q13.13 Seq+ 5910 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-ARHGEF25 FRS2 chr12 69864310 + ARHGEF25 chr12 58007222 + Exonic hg19 GBM TCGA-41-2571 4 5'UTR-5'UTR Intra-chr q15 q13.3 5911 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-DTX3 FRS2 chr12 69874139 + DTX3 chr12 58002302 + Exonic hg19 GBM TCGA-41-2571 2 5'UTR-CDS Intra-chr q15 q13.3 Seq+ 5912 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-RAB3IP FRS2 chr12 69925836 + RAB3IP chr12 70193988 + Exonic hg19 GBM TCGA-41-2571 2 5'UTR-CDS Intra-chr q15 q15 Seq+ 5913 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-DTX3 FRS2 chr12 69874139 + DTX3 chr12 58002859 + Exonic hg19 GBM TCGA-41-2571 2 5'UTR-CDS Intra-chr q15 q13.3 Seq+ 5914 ChimerSeq FusionScan TCGA_RNA-Seq CTDSP2-C12orf10 CTDSP2 chr12 58240154 - C12orf10 chr12 53699981 + Exonic hg19 GBM TCGA-41-2571 2 Out-of-Frame Intra-chr q14.1 q13.13 Seq+ 5915 ChimerSeq FusionScan TCGA_RNA-Seq CNN3-ALG14 CNN3 chr1 95392393 - ALG14 chr1 95448862 - Exonic hg19 GBM TCGA-26-5136 3 In-Frame Intra-chr p21.3 p21.3 Seq+ 5916 ChimerSeq FusionScan TCGA_RNA-Seq FBXW9-PRDX2 FBXW9 chr19 12805407 - PRDX2 chr19 12912084 - Exonic hg19 GBM TCGA-26-5136 2 CDS-5'UTR Intra-chr p13.13 p13.13 Seq+ 5917 ChimerSeq FusionScan TCGA_RNA-Seq GALNT8-KCNA6 GALNT8 chr12 4874712 + KCNA6 chr12 4959903 + Exonic hg19 GBM TCGA-06-0132 2 CDS-3'UTR Intra-chr p13.32 5918 ChimerSeq FusionScan TCGA_RNA-Seq WDR20-ASNA1 WDR20 chr14 102606509 + ASNA1 chr19 12856190 + Exonic hg19 GBM TCGA-14-0736 7 In-Frame Inter-chr q32.31 p13.13 Seq+ 5919 ChimerSeq FusionScan TCGA_RNA-Seq KLHL7-TMEM106B KLHL7 chr7 23191828 + TMEM106B chr7 12254434 + Exonic hg19 GBM TCGA-14-0736 2 5'UTR-5'UTR Intra-chr p15.3 p21.3 Seq+ 5920 ChimerSeq FusionScan TCGA_RNA-Seq PGD-CAMTA1 PGD chr1 10459761 + CAMTA1 chr1 7309550 + Exonic hg19 GBM TCGA-06-0190 3 Out-of-Frame Intra-chr p36.22 p36.31 Tumor suppressor gene Transcription factor Seq+ 5921 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHO2-ANKDD1A PLEKHO2 chr15 65153774 + ANKDD1A chr15 65214119 + Exonic hg19 GBM TCGA-06-0190 2 In-Frame Intra-chr q22.31 q22.31 5922 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152480271 + Exonic hg19 GBM TCGA-15-0742 2 Out-of-Frame Intra-chr q36.1 Seq+ 5923 ChimerSeq FusionScan TCGA_RNA-Seq EBF4-TMC2 EBF4 chr20 2674428 + TMC2 chr20 2621779 + Exonic hg19 GBM TCGA-06-0747 3 Out-of-Frame Intra-chr p13 Transcription factor p13 Seq+ 5924 ChimerSeq FusionScan TCGA_RNA-Seq GIGYF2-ECEL1 GIGYF2 chr2 233562102 + ECEL1 chr2 233345866 - Exonic hg19 GBM TCGA-06-0141 8 5'UTR-CDS Intra-chr q37.1 q37.1 Seq+ 5925 ChimerSeq FusionScan TCGA_RNA-Seq DPF2-POLA2 DPF2 chr11 65113830 + POLA2 chr11 65049949 + Exonic hg19 GBM TCGA-06-0141 5 In-Frame Intra-chr q13.1 q13.1 Seq+ 5926 ChimerSeq FusionScan TCGA_RNA-Seq TMSB4Y-KAL1 TMSB4Y chrY 15816315 + KAL1 chrX 8667786 - Exonic hg19 GBM TCGA-06-0141 2 Out-of-Frame Inter-chr q11.221 5927 ChimerSeq FusionScan TCGA_RNA-Seq RHBDD2-POR RHBDD2 chr7 75513166 + POR chr7 75583306 + Exonic hg19 GBM TCGA-32-2634 2 CDS-5'UTR Intra-chr q11.23 q11.23 5928 ChimerSeq FusionScan TCGA_RNA-Seq RAB27A-ASTN2 RAB27A chr15 55516086 - ASTN2 chr9 119626012 - Exonic hg19 GBM TCGA-06-2562 2 In-Frame Inter-chr q21.3 q33.1 Seq+ 5929 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152498705 + Exonic hg19 GBM TCGA-06-2562 2 In-Frame Intra-chr q36.1 Seq+ 5930 ChimerSeq FusionScan TCGA_RNA-Seq C12orf5-TSPAN9 C12orf5 chr12 4430469 + TSPAN9 chr12 3310342 + Exonic hg19 GBM TCGA-06-0157 9 CDS-5'UTR Intra-chr p13.33 Seq+ 5931 ChimerSeq FusionScan TCGA_RNA-Seq C12orf5-TSPAN9 C12orf5 chr12 4430469 + TSPAN9 chr12 3387586 + Exonic hg19 GBM TCGA-06-0157 6 Out-of-Frame Intra-chr p13.33 Seq+ 5932 ChimerSeq FusionScan TCGA_RNA-Seq RBMS2-LITAF RBMS2 chr12 56915873 + LITAF chr16 11650591 - Exonic hg19 GBM TCGA-06-0157 4 CDS-5'UTR Inter-chr q13.3 p13.13 Tumor suppressor gene Seq+ 5933 ChimerSeq FusionScan TCGA_RNA-Seq NFASC-SOX13 NFASC chr1 204797910 + SOX13 chr1 204082042 + Exonic hg19 GBM TCGA-06-0157 3 5'UTR-5'UTR Intra-chr q32.1 q32.1 Transcription factor Seq+ 5934 ChimerSeq FusionScan TCGA_RNA-Seq NAT8L-DBNDD1 NAT8L chr4 2062889 + DBNDD1 chr16 90075838 - Exonic hg19 GBM TCGA-06-0157 2 In-Frame Inter-chr p16.3 q24.3 Seq+ 5935 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152498705 + Exonic hg19 GBM TCGA-28-1747 3 In-Frame Intra-chr q36.1 Seq+ 5936 ChimerSeq FusionScan TCGA_RNA-Seq SCAF1-TRAPPC6A SCAF1 chr19 50150087 + TRAPPC6A chr19 45668452 - Exonic hg19 GBM TCGA-19-2620 3 Out-of-Frame Intra-chr q13.33 q13.32 Seq+ 5937 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHO2-ANKDD1A PLEKHO2 chr15 65153774 + ANKDD1A chr15 65214119 + Exonic hg19 GBM TCGA-19-2620 2 In-Frame Intra-chr q22.31 q22.31 5938 ChimerSeq FusionScan TCGA_RNA-Seq RBFOX2-LGALS2 RBFOX2 chr22 36424287 - LGALS2 chr22 37967938 - Exonic hg19 GBM TCGA-19-2625 5 In-Frame Intra-chr q13.1 Seq+ 5939 ChimerSeq FusionScan TCGA_RNA-Seq MYO18B-UBE2R2 MYO18B chr22 26228964 + UBE2R2 chr9 33911961 + Exonic hg19 GBM TCGA-19-2625 5 Out-of-Frame Inter-chr q12.1 Tumor suppressor gene p13.3 Seq+ 5940 ChimerSeq FusionScan TCGA_RNA-Seq DRG1-MYH9 DRG1 chr22 31823168 + MYH9 chr22 36723533 - Exonic hg19 GBM TCGA-19-2625 4 Out-of-Frame Intra-chr q12.2 Tumor suppressor gene q12.3 Oncogene Tumor suppressor gene Seq+ 5941 ChimerSeq FusionScan TCGA_RNA-Seq CLTA-UBE2R2 CLTA chr9 36204176 + UBE2R2 chr9 33911961 + Exonic hg19 GBM TCGA-28-5204 9 In-Frame Intra-chr p13.3 p13.3 Seq+ 5942 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D14-HTRA3 TBC1D14 chr4 6996029 + HTRA3 chr4 8288287 + Exonic hg19 GBM TCGA-28-5204 6 In-Frame Intra-chr p16.1 p16.1 Tumor suppressor gene Seq+ 5943 ChimerSeq FusionScan TCGA_RNA-Seq FAM102A-PTGES2 FAM102A chr9 130742270 - PTGES2 chr9 130887720 - Exonic hg19 GBM TCGA-28-5204 2 Out-of-Frame Intra-chr q34.11 q34.11 Seq+ 5944 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152498705 + Exonic hg19 GBM TCGA-28-5204 2 In-Frame Intra-chr q36.1 Seq+ 5945 ChimerSeq FusionScan TCGA_RNA-Seq ZSWIM5-EIF2B3 ZSWIM5 chr1 45553552 - EIF2B3 chr1 45392411 - Exonic hg19 GBM TCGA-06-0649 5 In-Frame Intra-chr p34.1 p34.1 Seq+ 5946 ChimerSeq FusionScan TCGA_RNA-Seq MYL6B-VWA3A MYL6B chr12 56547876 + VWA3A chr16 22161107 + Exonic hg19 GBM TCGA-06-0156 5 Out-of-Frame Inter-chr q13.2 Seq+ 5947 ChimerSeq FusionScan TCGA_RNA-Seq SEC61G-CHCHD2 SEC61G chr7 54826850 - CHCHD2 chr7 56172168 - Exonic hg19 GBM TCGA-28-2513 15 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 5948 ChimerSeq FusionScan TCGA_RNA-Seq SEC61G-CHCHD2 SEC61G chr7 54826854 - CHCHD2 chr7 56172168 - Exonic hg19 GBM TCGA-28-2513 9 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 5949 ChimerSeq FusionScan TCGA_RNA-Seq SEC61G-PHKG1 SEC61G chr7 54826850 - PHKG1 chr7 56156668 - Exonic hg19 GBM TCGA-28-2513 2 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 5950 ChimerSeq FusionScan TCGA_RNA-Seq NFASC-PRELP NFASC chr1 204797910 + PRELP chr1 203452296 + Exonic hg19 GBM TCGA-06-0210 2 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 5951 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152480271 + Exonic hg19 GBM TCGA-06-0210 2 Out-of-Frame Intra-chr q36.1 Seq+ 5952 ChimerSeq FusionScan TCGA_RNA-Seq PATL1-TECTA PATL1 chr11 59434325 - TECTA chr11 121058540 + Exonic hg19 GBM TCGA-26-5132 9 Out-of-Frame Intra-chr q12.1 q23.3 Seq+ 5953 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHO2-ANKDD1A PLEKHO2 chr15 65153774 + ANKDD1A chr15 65214119 + Exonic hg19 GBM TCGA-26-5132 2 In-Frame Intra-chr q22.31 q22.31 5954 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D15-LGR5 TBC1D15 chr12 72233591 + LGR5 chr12 71898393 + Exonic hg19 GBM TCGA-26-5132 2 Out-of-Frame Intra-chr q21.1 q21.1 Seq+ 5955 ChimerSeq FusionScan TCGA_RNA-Seq KIF1B-UBE4B KIF1B chr1 10292492 + UBE4B chr1 10238701 + Exonic hg19 GBM TCGA-16-1045 10 Out-of-Frame Intra-chr p36.22 Tumor suppressor gene p36.22 Tumor suppressor gene Seq+ 5956 ChimerSeq FusionScan TCGA_RNA-Seq THRA-GSDMA THRA chr17 38233861 + GSDMA chr17 38121935 + Exonic hg19 GBM TCGA-16-1045 6 CDS-5'UTR Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Seq+ 5957 ChimerSeq FusionScan TCGA_RNA-Seq BAI2-HS3ST4 BAI2 chr1 32221599 - HS3ST4 chr16 26146932 + Exonic hg19 GBM TCGA-16-1045 2 Out-of-Frame Inter-chr p12.1 Seq+ 5958 ChimerSeq FusionScan TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741428 + Exonic hg19 GBM TCGA-16-1045 2 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 5959 ChimerSeq FusionScan TCGA_RNA-Seq SCD5-TMEM150C SCD5 chr4 83601859 - TMEM150C chr4 83425820 - Exonic hg19 GBM TCGA-06-5416 2 CDS-5'UTR Intra-chr q21.22 q21.22 Seq+ 5960 ChimerSeq FusionScan TCGA_RNA-Seq EIF4H-GTF2I EIF4H chr7 73604248 + GTF2I chr7 74173109 + Exonic hg19 GBM TCGA-06-2557 9 In-Frame Intra-chr q11.23 q11.23 Transcription factor Seq+ 5961 ChimerSeq FusionScan TCGA_RNA-Seq EIF4H-GTF2I EIF4H chr7 73604636 + GTF2I chr7 74173109 + Exonic hg19 GBM TCGA-06-2557 7 In-Frame Intra-chr q11.23 q11.23 Transcription factor Seq+ 5962 ChimerSeq FusionScan TCGA_RNA-Seq SYS1-SMYD3 SYS1 chr20 43994326 + SMYD3 chr1 245927451 - Exonic hg19 GBM TCGA-06-2557 2 In-Frame Inter-chr q13.12 q44 Transcription factor Seq+ 5963 ChimerSeq FusionScan TCGA_RNA-Seq NFIA-RNLS NFIA chr1 61554352 + RNLS chr10 90122482 - Exonic hg19 GBM TCGA-19-0957 2 In-Frame Inter-chr p31.3 Transcription factor q23.31 Seq+ 5964 ChimerSeq FusionScan TCGA_RNA-Seq ARIH2-CAMP ARIH2 chr3 48965246 + CAMP chr3 48265843 + Exonic hg19 GBM TCGA-14-2554 5 In-Frame Intra-chr p21.31 p21.31 Seq+ 5965 ChimerSeq FusionScan TCGA_RNA-Seq PRKAR2A-SPINK8 PRKAR2A chr3 48884767 - SPINK8 chr3 48351436 - Exonic hg19 GBM TCGA-14-2554 3 Out-of-Frame Intra-chr p21.31 p21.31 Seq+ 5966 ChimerSeq FusionScan TCGA_RNA-Seq ARIH2-CAMP ARIH2 chr3 48956431 + CAMP chr3 48265843 + Exonic hg19 GBM TCGA-14-2554 2 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 5967 ChimerSeq FusionScan TCGA_RNA-Seq CEP85L-SYTL3 CEP85L chr6 118953615 - SYTL3 chr6 159166511 + Exonic hg19 GBM TCGA-14-2554 2 Out-of-Frame Intra-chr q22.31 q25.3 Seq+ 5968 ChimerSeq FusionScan TCGA_RNA-Seq KRBOX1-FAM198A KRBOX1 chr3 42983563 + FAM198A chr3 43073758 + Exonic hg19 GBM TCGA-14-2554 2 Out-of-Frame Intra-chr p22.1 p22.1 Seq+ 5969 ChimerSeq FusionScan TCGA_RNA-Seq NFASC-LRRN2 NFASC chr1 204797910 + LRRN2 chr1 204589346 - Exonic hg19 GBM TCGA-27-1834 3 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 5970 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152498705 + Exonic hg19 GBM TCGA-26-5134 2 In-Frame Intra-chr q36.1 Seq+ 5971 ChimerSeq FusionScan TCGA_RNA-Seq FABP7-EPRS FABP7 chr6 123102339 + EPRS chr1 220146740 - Exonic hg19 GBM TCGA-06-2563 2 In-Frame Inter-chr q22.31 q41 5972 ChimerSeq FusionScan TCGA_RNA-Seq LMO1-RIC3 LMO1 chr11 8248521 - RIC3 chr11 8161740 - Exonic hg19 GBM TCGA-06-2563 2 Out-of-Frame Intra-chr p15.4 p15.4 Seq+ 5973 ChimerSeq FusionScan TCGA_RNA-Seq DDIT3-CTDSP2 DDIT3 chr12 57914200 - CTDSP2 chr12 58218102 - Exonic hg19 GBM TCGA-06-0238 3 5'UTR-CDS Intra-chr q13.3 Oncogene Transcription factor q14.1 Seq+ 5974 ChimerSeq FusionScan TCGA_RNA-Seq TM9SF4-HM13 TM9SF4 chr20 30697558 + HM13 chr20 30136831 + Exonic hg19 GBM TCGA-06-0238 2 Out-of-Frame Intra-chr q11.21 q11.21 Seq+ 5975 ChimerSeq FusionScan TCGA_RNA-Seq KRBOX1-FAM198A KRBOX1 chr3 42983563 + FAM198A chr3 43073758 + Exonic hg19 GBM TCGA-06-5408 4 Out-of-Frame Intra-chr p22.1 p22.1 Seq+ 5976 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152498705 + Exonic hg19 GBM TCGA-06-5408 2 In-Frame Intra-chr q36.1 Seq+ 5977 ChimerSeq FusionScan TCGA_RNA-Seq CTNNBIP1-CLSTN1 CTNNBIP1 chr1 9931244 - CLSTN1 chr1 9833452 - Exonic hg19 GBM TCGA-15-1444 2 In-Frame Intra-chr p36.22 Tumor suppressor gene p36.22 Seq+ 5978 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHO2-ANKDD1A PLEKHO2 chr15 65147236 + ANKDD1A chr15 65223019 + Exonic hg19 GBM TCGA-08-0386 2 In-Frame Intra-chr q22.31 q22.31 5979 ChimerSeq FusionScan TCGA_RNA-Seq CCDC122-ENOX1 CCDC122 chr13 44448977 - ENOX1 chr13 44241680 - Exonic hg19 GBM TCGA-08-0386 2 5'UTR-5'UTR Intra-chr q14.11 q14.11 Seq+ 5980 ChimerSeq FusionScan TCGA_RNA-Seq UBE2L3-PA2G4 UBE2L3 chr22 21922060 + PA2G4 chr12 56503013 + Exonic hg19 GBM TCGA-32-1982 2 In-Frame Inter-chr q11.21 q13.2 Transcription factor 5981 ChimerSeq FusionScan TCGA_RNA-Seq ADAM17-NHEJ1 ADAM17 chr2 9633875 - NHEJ1 chr2 220023084 - Exonic hg19 GBM TCGA-19-2629 4 CDS-5'UTR Intra-chr p25.1 q35 Seq+ 5982 ChimerSeq FusionScan TCGA_RNA-Seq KRBOX1-FAM198A KRBOX1 chr3 42983563 + FAM198A chr3 43073758 + Exonic hg19 GBM TCGA-19-2629 2 Out-of-Frame Intra-chr p22.1 p22.1 Seq+ 5983 ChimerSeq FusionScan TCGA_RNA-Seq CCDC127-TERT CCDC127 chr5 216843 - TERT chr5 1282739 - Exonic hg19 GBM TCGA-06-2564 2 In-Frame Intra-chr p15.33 p15.33 Oncogene Seq+ 5984 ChimerSeq FusionScan TCGA_RNA-Seq KRBOX1-FAM198A KRBOX1 chr3 42983563 + FAM198A chr3 43073758 + Exonic hg19 GBM TCGA-06-2564 2 Out-of-Frame Intra-chr p22.1 p22.1 Seq+ 5985 ChimerSeq FusionScan TCGA_RNA-Seq CDKL3-PPP2CA CDKL3 chr5 133638280 - PPP2CA chr5 133541822 - Exonic hg19 GBM TCGA-26-5139 2 In-Frame Intra-chr q31.1 CMGC:CDKL q31.1 Tumor suppressor gene 5986 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152498705 + Exonic hg19 GBM TCGA-06-0125 5 In-Frame Intra-chr q36.1 Seq+ 5987 ChimerSeq FusionScan TCGA_RNA-Seq ARID1A-RNF31 ARID1A chr1 27094490 + RNF31 chr14 24624365 + Exonic hg19 GBM TCGA-06-0125 2 In-Frame Inter-chr p36.11 Oncogene Tumor suppressor gene q12 Seq+ 5988 ChimerSeq FusionScan TCGA_RNA-Seq FDX1-SLC35E2 FDX1 chr11 110327771 + SLC35E2 chr1 1666274 - Exonic hg19 GBM TCGA-06-0125 2 Out-of-Frame Inter-chr q22.3 p36.33 Seq+ 5989 ChimerSeq FusionScan TCGA_RNA-Seq SEC61G-EGFR SEC61G chr7 54825187 - EGFR chr7 55224225 + Exonic hg19 GBM TCGA-06-0211 9 In-Frame Intra-chr p11.2 p11.2 TK:EGFR Oncogene Seq+ 5990 ChimerSeq FusionScan TCGA_RNA-Seq LANCL2-SEPT14 LANCL2 chr7 55479782 + SEPT14 chr7 55886916 - Exonic hg19 GBM TCGA-06-0211 2 In-Frame Intra-chr p11.2 p11.2 Seq+ 5991 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152480271 + Exonic hg19 GBM TCGA-14-0790 3 Out-of-Frame Intra-chr q36.1 Seq+ 5992 ChimerSeq FusionScan TCGA_RNA-Seq PXDN-TRIP12 PXDN chr2 1651943 - TRIP12 chr2 230638977 - Exonic hg19 GBM TCGA-06-0882 2 Out-of-Frame Intra-chr p25.3 q36.3 Seq+ 5993 ChimerSeq FusionScan TCGA_RNA-Seq FBRSL1-SFSWAP FBRSL1 chr12 133067447 + SFSWAP chr12 132262609 + Exonic hg19 GBM TCGA-06-0882 2 In-Frame Intra-chr q24.33 q24.33 Seq+ 5994 ChimerSeq FusionScan TCGA_RNA-Seq ASH1L-YY1AP1 ASH1L chr1 155531943 - YY1AP1 chr1 155640255 - Exonic hg19 GBM TCGA-28-5207 3 5'UTR-CDS Intra-chr q22 Transcription factor q22 Seq+ 5995 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152480271 + Exonic hg19 GBM TCGA-28-5207 2 Out-of-Frame Intra-chr q36.1 Seq+ 5996 ChimerSeq FusionScan TCGA_RNA-Seq CNOT2-TSPAN8 CNOT2 chr12 70637260 + TSPAN8 chr12 71551567 - Exonic hg19 GBM TCGA-06-0187 3 5'UTR-5'UTR Intra-chr q15 q21.1 Seq+ 5997 ChimerSeq FusionScan TCGA_RNA-Seq GALNT8-KCNA6 GALNT8 chr12 4874712 + KCNA6 chr12 4959903 + Exonic hg19 GBM TCGA-06-1804 4 CDS-3'UTR Intra-chr p13.32 5998 ChimerSeq FusionScan TCGA_RNA-Seq EIF3K-ACTN4 EIF3K chr19 39123318 + ACTN4 chr19 39191239 + Exonic hg19 GBM TCGA-28-5215 2 Out-of-Frame Intra-chr 5999 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152498705 + Exonic hg19 GBM TCGA-28-5215 2 In-Frame Intra-chr q36.1 Seq+ 6000 ChimerSeq FusionScan TCGA_RNA-Seq NELL2-OS9 NELL2 chr12 45269007 - OS9 chr12 58109542 + Exonic hg19 GBM TCGA-19-5960 3 Out-of-Frame Intra-chr q12 q13.3 Seq+ 6001 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152480271 + Exonic hg19 GBM TCGA-19-5960 2 Out-of-Frame Intra-chr q36.1 Seq+ 6002 ChimerSeq FusionScan TCGA_RNA-Seq CTDSP2-TSPAN31 CTDSP2 chr12 58240154 - TSPAN31 chr12 58140371 + Exonic hg19 GBM TCGA-16-0846 4 Out-of-Frame Intra-chr q14.1 q14.1 Seq+ 6003 ChimerSeq FusionScan TCGA_RNA-Seq CTDSP2-TSPAN31 CTDSP2 chr12 58240154 - TSPAN31 chr12 58139527 + Exonic hg19 GBM TCGA-16-0846 2 Out-of-Frame Intra-chr q14.1 q14.1 Seq+ 6004 ChimerSeq FusionScan TCGA_RNA-Seq KRBOX1-FAM198A KRBOX1 chr3 42983563 + FAM198A chr3 43073758 + Exonic hg19 GBM TCGA-19-1390 2 Out-of-Frame Intra-chr p22.1 p22.1 Seq+ 6005 ChimerSeq FusionScan TCGA_RNA-Seq CTNNBIP1-CLSTN1 CTNNBIP1 chr1 9931244 - CLSTN1 chr1 9833452 - Exonic hg19 GBM TCGA-19-1390 2 In-Frame Intra-chr p36.22 Tumor suppressor gene p36.22 Seq+ 6006 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152498705 + Exonic hg19 GBM TCGA-19-1390 2 In-Frame Intra-chr q36.1 Seq+ 6007 ChimerSeq FusionScan TCGA_RNA-Seq HCG18-MAP2K4 HCG18 chr6 30294130 - MAP2K4 chr17 12011106 + Exonic hg19 GBM TCGA-06-0221 2 5'UTR-CDS Inter-chr p12 STE:STE7 Oncogene Tumor suppressor gene Seq+ 6008 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53897827 - Exonic hg19 GBM TCGA-06-2567 2 5'UTR-CDS Intra-chr p16.2 p16.2 6009 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152480271 + Exonic hg19 GBM TCGA-06-2567 2 Out-of-Frame Intra-chr q36.1 Seq+ 6010 ChimerSeq FusionScan TCGA_RNA-Seq GALNT8-KCNA6 GALNT8 chr12 4874712 + KCNA6 chr12 4959903 + Exonic hg19 GBM TCGA-12-0821 2 CDS-3'UTR Intra-chr p13.32 6011 ChimerSeq FusionScan TCGA_RNA-Seq RHBDD2-POR RHBDD2 chr7 75513166 + POR chr7 75583306 + Exonic hg19 GBM TCGA-12-0821 2 CDS-5'UTR Intra-chr q11.23 q11.23 6012 ChimerSeq FusionScan TCGA_RNA-Seq VOPP1-SUMF2 VOPP1 chr7 55639963 - SUMF2 chr7 56136174 + Exonic hg19 GBM TCGA-06-0743 6 Out-of-Frame Intra-chr p11.2 p11.2 6013 ChimerSeq FusionScan TCGA_RNA-Seq MRPS17-PSPH MRPS17 chr7 56021011 + PSPH chr7 56079562 - Exonic hg19 GBM TCGA-06-0743 2 In-Frame Intra-chr p11.2 p11.2 Seq+ 6014 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHO2-ANKDD1A PLEKHO2 chr15 65153774 + ANKDD1A chr15 65214119 + Exonic hg19 GBM TCGA-32-2632 2 In-Frame Intra-chr q22.31 q22.31 6015 ChimerSeq FusionScan TCGA_RNA-Seq SRP68-URM1 SRP68 chr17 74039909 - URM1 chr9 131150094 + Exonic hg19 GBM TCGA-06-0219 3 Out-of-Frame Inter-chr q25.1 q34.11 Seq+ 6016 ChimerSeq FusionScan TCGA_RNA-Seq EML1-FSIP1 EML1 chr14 100259880 + FSIP1 chr15 40005782 - Exonic hg19 GBM TCGA-12-3652 2 Out-of-Frame Inter-chr q32.2 q14 6017 ChimerSeq FusionScan TCGA_RNA-Seq NFX1-C9orf24 NFX1 chr9 33295425 + C9orf24 chr9 34382867 - Exonic hg19 GBM TCGA-12-3652 2 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 6018 ChimerSeq FusionScan TCGA_RNA-Seq LANCL2-SEPT14 LANCL2 chr7 55479782 + SEPT14 chr7 55886916 - Exonic hg19 GBM TCGA-06-0211 16 In-Frame Intra-chr p11.2 p11.2 Seq+ 6019 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHO2-ANKDD1A PLEKHO2 chr15 65153774 + ANKDD1A chr15 65214119 + Exonic hg19 GBM TCGA-06-0211 3 In-Frame Intra-chr q22.31 q22.31 6020 ChimerSeq FusionScan TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978964 + Exonic hg19 GBM TCGA-06-0211 2 CDS-5'UTR Intra-chr q23 Seq+ 6021 ChimerSeq FusionScan TCGA_RNA-Seq ASH1L-C1orf61 ASH1L chr1 155385534 - C1orf61 chr1 156384545 - Exonic hg19 GBM TCGA-14-0787 8 In-Frame Intra-chr q22 Transcription factor q22 Seq+ 6022 ChimerSeq FusionScan TCGA_RNA-Seq ASH1L-C1orf61 ASH1L chr1 155385534 - C1orf61 chr1 156374393 - Exonic hg19 GBM TCGA-14-0787 3 Out-of-Frame Intra-chr q22 Transcription factor q22 Seq+ 6023 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHO2-ANKDD1A PLEKHO2 chr15 65147236 + ANKDD1A chr15 65223019 + Exonic hg19 GBM TCGA-12-3653 2 In-Frame Intra-chr q22.31 q22.31 6024 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-DTX3 FRS2 chr12 69864310 + DTX3 chr12 58002859 + Exonic hg19 GBM TCGA-12-3653 2 5'UTR-CDS Intra-chr q15 q13.3 Seq+ 6025 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152498705 + Exonic hg19 GBM TCGA-12-3653 2 In-Frame Intra-chr q36.1 Seq+ 6026 ChimerSeq FusionScan TCGA_RNA-Seq SNX13-SDK1 SNX13 chr7 17979906 - SDK1 chr7 4245510 + Exonic hg19 GBM TCGA-12-0616 2 Out-of-Frame Intra-chr p21.1 p22.2 Seq+ 6027 ChimerSeq FusionScan TCGA_RNA-Seq ARID1A-RNF31 ARID1A chr1 27094490 + RNF31 chr14 24624365 + Exonic hg19 GBM TCGA-06-0125 2 In-Frame Inter-chr p36.11 Oncogene Tumor suppressor gene q12 Seq+ 6028 ChimerSeq FusionScan TCGA_RNA-Seq LANCL2-PSPH LANCL2 chr7 55433922 + PSPH chr7 56079562 - Exonic hg19 GBM TCGA-28-5208 6 In-Frame Intra-chr p11.2 p11.2 Seq+ 6029 ChimerSeq FusionScan TCGA_RNA-Seq COBL-SEPT14 COBL chr7 51203854 - SEPT14 chr7 55886916 - Exonic hg19 GBM TCGA-28-5208 5 In-Frame Intra-chr p12.1 p11.2 Seq+ 6030 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHO2-ANKDD1A PLEKHO2 chr15 65153774 + ANKDD1A chr15 65214119 + Exonic hg19 GBM TCGA-28-5208 2 In-Frame Intra-chr q22.31 q22.31 6031 ChimerSeq FusionScan TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978964 + Exonic hg19 GBM TCGA-28-5208 2 CDS-5'UTR Intra-chr q23 Seq+ 6032 ChimerSeq FusionScan TCGA_RNA-Seq PGD-CAMTA1 PGD chr1 10459761 + CAMTA1 chr1 7309550 + Exonic hg19 GBM TCGA-06-0190 2 Out-of-Frame Intra-chr p36.22 p36.31 Tumor suppressor gene Transcription factor Seq+ 6033 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152498705 + Exonic hg19 GBM TCGA-06-0190 2 In-Frame Intra-chr q36.1 Seq+ 6034 ChimerSeq FusionScan TCGA_RNA-Seq BMPR1A-LIPA BMPR1A chr10 88516676 + LIPA chr10 91007406 - Exonic hg19 GBM TCGA-76-4926 5 5'UTR-5'UTR Intra-chr q23.2 TKL:STKR Oncogene Tumor suppressor gene q23.31 Seq+ 6035 ChimerSeq FusionScan TCGA_RNA-Seq STAG2-PAK3 STAG2 chrX 123191827 + PAK3 chrX 110257055 + Exonic hg19 GBM TCGA-76-4926 4 CDS-5'UTR Intra-chr q25 Oncogene q23 STE:STE20 Oncogene Seq+ 6036 ChimerSeq FusionScan TCGA_RNA-Seq STAU2-LRRC6 STAU2 chr8 74659017 - LRRC6 chr8 133673873 - Exonic hg19 GBM TCGA-41-3915 2 5'UTR-CDS Intra-chr q21.11 q24.22 Seq+ 6037 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHO2-ANKDD1A PLEKHO2 chr15 65153774 + ANKDD1A chr15 65223019 + Exonic hg19 GBM TCGA-06-5414 2 In-Frame Intra-chr q22.31 q22.31 6038 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 GBM TCGA-06-5414 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 6039 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHO2-ANKDD1A PLEKHO2 chr15 65153774 + ANKDD1A chr15 65214119 + Exonic hg19 GBM TCGA-06-5414 2 In-Frame Intra-chr q22.31 q22.31 6040 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152498705 + Exonic hg19 GBM TCGA-06-5414 2 In-Frame Intra-chr q36.1 Seq+ 6041 ChimerSeq FusionScan TCGA_RNA-Seq L2HGDH-MTX1 L2HGDH chr14 50760832 - MTX1 chr1 155182175 + Exonic hg19 GBM TCGA-26-5133 3 In-Frame Inter-chr q21.3 q22 6042 ChimerSeq FusionScan TCGA_RNA-Seq DENND3-PTK2 DENND3 chr8 142154358 + PTK2 chr8 141669777 - Exonic hg19 GBM TCGA-26-5133 2 In-Frame Intra-chr q24.3 q24.3 Seq+ 6043 ChimerSeq FusionScan TCGA_RNA-Seq TAB1-PICK1 TAB1 chr22 39817976 + PICK1 chr22 38467688 + Exonic hg19 GBM TCGA-26-5133 2 Out-of-Frame Intra-chr q13.1 q13.1 Seq+ 6044 ChimerSeq FusionScan TCGA_RNA-Seq EGFR-PSPH EGFR chr7 55268106 + PSPH chr7 56079562 - Exonic hg19 GBM TCGA-28-5209 19 In-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 6045 ChimerSeq FusionScan TCGA_RNA-Seq UBE2D2-CXXC5 UBE2D2 chr5 139003046 + CXXC5 chr5 139059948 + Exonic hg19 GBM TCGA-28-5209 2 CDS-5'UTR Intra-chr q31.2 q31.2 Tumor suppressor gene Transcription factor Seq+ 6046 ChimerSeq FusionScan TCGA_RNA-Seq KRBOX1-FAM198A KRBOX1 chr3 42983563 + FAM198A chr3 43073758 + Exonic hg19 GBM TCGA-28-5209 2 Out-of-Frame Intra-chr p22.1 p22.1 Seq+ 6047 ChimerSeq FusionScan TCGA_RNA-Seq CDK5RAP2-RCC1 CDK5RAP2 chr9 123342197 - RCC1 chr1 28864343 + Exonic hg19 GBM TCGA-06-0171 2 Out-of-Frame Inter-chr q33.2 p35.3 Seq+ 6048 ChimerSeq FusionScan TCGA_RNA-Seq SETD1B-KDM2B SETD1B chr12 122248741 + KDM2B chr12 122013764 - Exonic hg19 GBM TCGA-06-5856 7 Out-of-Frame Intra-chr q24.31 q24.31 Transcription factor Seq+ 6049 ChimerSeq FusionScan TCGA_RNA-Seq KDM2B-KSR2 KDM2B chr12 121986781 - KSR2 chr12 118298236 - Exonic hg19 GBM TCGA-06-5856 7 Out-of-Frame Intra-chr q24.31 Transcription factor q24.23 TKL:RAF Seq+ 6050 ChimerSeq FusionScan TCGA_RNA-Seq C12orf49-MDM2 C12orf49 chr12 117175594 - MDM2 chr12 69229608 + Exonic hg19 GBM TCGA-06-5856 6 In-Frame Intra-chr q24.22 q15 Oncogene Seq+ 6051 ChimerSeq FusionScan TCGA_RNA-Seq TMEM120B-AVIL TMEM120B chr12 122150870 + AVIL chr12 58193703 - Exonic hg19 GBM TCGA-06-5856 6 In-Frame Intra-chr q24.31 q14.1 Seq+ 6052 ChimerSeq FusionScan TCGA_RNA-Seq PSPC1-CRYL1 PSPC1 chr13 20304378 - CRYL1 chr13 20987526 - Exonic hg19 GBM TCGA-06-5856 5 In-Frame Intra-chr q12.11 q12.11 Seq+ 6053 ChimerSeq FusionScan TCGA_RNA-Seq NAA60-IL32 NAA60 chr16 3498540 + IL32 chr16 3115784 + Exonic hg19 GBM TCGA-06-5856 5 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 6054 ChimerSeq FusionScan TCGA_RNA-Seq NAA60-IL32 NAA60 chr16 3508181 + IL32 chr16 3115784 + Exonic hg19 GBM TCGA-06-5856 4 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 6055 ChimerSeq FusionScan TCGA_RNA-Seq CTDSP2-MDM2 CTDSP2 chr12 58240154 - MDM2 chr12 69202987 + Exonic hg19 GBM TCGA-06-5856 4 Out-of-Frame Intra-chr q14.1 q15 Oncogene Seq+ 6056 ChimerSeq FusionScan TCGA_RNA-Seq VASN-RBFOX1 VASN chr16 4421994 + RBFOX1 chr16 7759057 + Exonic hg19 GBM TCGA-06-5856 3 5'UTR-CDS Intra-chr p13.3 Seq+ 6057 ChimerSeq FusionScan TCGA_RNA-Seq LUC7L-KCTD5 LUC7L chr16 249060 - KCTD5 chr16 2745935 + Exonic hg19 GBM TCGA-06-5856 2 In-Frame Intra-chr p13.3 p13.3 Seq+ 6058 ChimerSeq FusionScan TCGA_RNA-Seq SETD1B-KDM2B SETD1B chr12 122248741 + KDM2B chr12 122012498 - Exonic hg19 GBM TCGA-06-5856 2 Out-of-Frame Intra-chr q24.31 q24.31 Transcription factor Seq+ 6059 ChimerSeq FusionScan TCGA_RNA-Seq KRIT1-GNGT1 KRIT1 chr7 91866980 - GNGT1 chr7 93536047 + Exonic hg19 GBM TCGA-32-2615 7 CDS-5'UTR Intra-chr q21.2 Tumor suppressor gene q21.3 Seq+ 6060 ChimerSeq FusionScan TCGA_RNA-Seq R3HDM2-SORBS2 R3HDM2 chr12 57704046 - SORBS2 chr4 186696520 - Exonic hg19 GBM TCGA-06-0178 2 CDS-5'UTR Inter-chr q13.3 q35.1 Seq+ 6061 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152498705 + Exonic hg19 GBM TCGA-76-4928 3 In-Frame Intra-chr q36.1 Seq+ 6062 ChimerSeq FusionScan TCGA_RNA-Seq OS9-C12orf66 OS9 chr12 58090156 + C12orf66 chr12 64588438 - Exonic hg19 GBM TCGA-06-0174 14 Out-of-Frame Intra-chr q13.3 q14.2 Seq+ 6063 ChimerSeq FusionScan TCGA_RNA-Seq OS9-XRCC6BP1 OS9 chr12 58089626 + XRCC6BP1 chr12 58339410 + Exonic hg19 GBM TCGA-06-0174 7 In-Frame Intra-chr q13.3 Seq+ 6064 ChimerSeq FusionScan TCGA_RNA-Seq MEIS2-ZNF143 MEIS2 chr15 37329014 - ZNF143 chr11 9516192 + Exonic hg19 GBM TCGA-06-0174 5 In-Frame Inter-chr q14 Transcription factor p15.4 Transcription factor Seq+ 6065 ChimerSeq FusionScan TCGA_RNA-Seq R3HDM2-PIP4K2C R3HDM2 chr12 57689181 - PIP4K2C chr12 57992847 + Exonic hg19 GBM TCGA-06-0174 5 In-Frame Intra-chr q13.3 q13.3 Seq+ 6066 ChimerSeq FusionScan TCGA_RNA-Seq R3HDM2-PIP4K2C R3HDM2 chr12 57689181 - PIP4K2C chr12 57989670 + Exonic hg19 GBM TCGA-06-0174 4 In-Frame Intra-chr q13.3 q13.3 Seq+ 6067 ChimerSeq FusionScan TCGA_RNA-Seq OS9-C12orf66 OS9 chr12 58089626 + C12orf66 chr12 64588438 - Exonic hg19 GBM TCGA-06-0174 4 Out-of-Frame Intra-chr q13.3 q14.2 Seq+ 6068 ChimerSeq FusionScan TCGA_RNA-Seq OS9-CPSF6 OS9 chr12 58090156 + CPSF6 chr12 69644908 + Exonic hg19 GBM TCGA-06-0174 3 In-Frame Intra-chr q13.3 q15 Seq+ 6069 ChimerSeq FusionScan TCGA_RNA-Seq R3HDM2-PIP4K2C R3HDM2 chr12 57682791 - PIP4K2C chr12 57989670 + Exonic hg19 GBM TCGA-06-0174 2 Out-of-Frame Intra-chr q13.3 q13.3 Seq+ 6070 ChimerSeq FusionScan TCGA_RNA-Seq SGCB-FIP1L1 SGCB chr4 52894895 - FIP1L1 chr4 54319086 + Exonic hg19 GBM TCGA-06-0174 2 Out-of-Frame Intra-chr q12 q12 6071 ChimerSeq FusionScan TCGA_RNA-Seq SDC4-SPCS1 SDC4 chr20 43976964 - SPCS1 chr3 52740659 + Exonic hg19 GBM TCGA-12-5295 5 In-Frame Inter-chr q13.12 p21.1 Seq+ 6072 ChimerSeq FusionScan TCGA_RNA-Seq LIN54-SEC31A LIN54 chr4 83857133 - SEC31A chr4 83795904 - Exonic hg19 HNSC TCGA-CN-6023 2 In-Frame Intra-chr q21.22 Transcription factor q21.22 Seq+ 6073 ChimerSeq FusionScan TCGA_RNA-Seq ZNF485-THADA ZNF485 chr10 44104798 + THADA chr2 43625278 - Exonic hg19 HNSC TCGA-CQ-A4C9 2 Out-of-Frame Inter-chr q11.21 Transcription factor p21 6074 ChimerSeq FusionScan TCGA_RNA-Seq LAMB1-PUS7 LAMB1 chr7 107626466 - PUS7 chr7 105098373 - Exonic hg19 HNSC TCGA-BA-6868 4 In-Frame Intra-chr q31.1 q22.3 Seq+ 6075 ChimerSeq FusionScan TCGA_RNA-Seq MAMDC2-MRPS28 MAMDC2 chr9 72746528 + MRPS28 chr8 80831383 - Exonic hg19 HNSC TCGA-BA-6868 3 Out-of-Frame Inter-chr q21.12 q21.13 Seq+ 6076 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57990165 + VMP1 chr17 57915655 + Exonic hg19 HNSC TCGA-BA-6868 2 Out-of-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 6077 ChimerSeq FusionScan TCGA_RNA-Seq MAP3K5-ARFIP1 MAP3K5 chr6 137112847 - ARFIP1 chr4 153793603 + Exonic hg19 HNSC TCGA-CN-4736 2 In-Frame Inter-chr q23.3 STE:STE11 q31.3 Seq+ 6078 ChimerSeq FusionScan TCGA_RNA-Seq DHTKD1-CDC123 DHTKD1 chr10 12111186 + CDC123 chr10 12272946 + Exonic hg19 HNSC TCGA-DQ-7592 3 Out-of-Frame Intra-chr p14 p14 Seq+ 6079 ChimerSeq FusionScan TCGA_RNA-Seq TFRC-MINA TFRC chr3 195800800 - MINA chr3 97678023 - Exonic hg19 HNSC TCGA-CV-6942 2 Out-of-Frame Intra-chr q29 6080 ChimerSeq FusionScan TCGA_RNA-Seq MBP-ZNF516 MBP chr18 74817166 - ZNF516 chr18 74092259 - Exonic hg19 HNSC TCGA-CV-6942 2 Out-of-Frame Intra-chr q23 q23 Transcription factor 6081 ChimerSeq FusionScan TCGA_RNA-Seq ESYT2-ZNF595 ESYT2 chr7 158590632 - ZNF595 chr4 59322 + Exonic hg19 HNSC TCGA-QK-A8ZA 3 Out-of-Frame Inter-chr q36.3 p16.3 Transcription factor Seq+ 6082 ChimerSeq FusionScan TCGA_RNA-Seq ZFAT-TNKS1BP1 ZFAT chr8 135521861 - TNKS1BP1 chr11 57070299 - Exonic hg19 HNSC TCGA-BA-A6DD 2 Out-of-Frame Inter-chr q24.22 Transcription factor q12.1 6083 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57756880 + VMP1 chr17 57895072 + Exonic hg19 HNSC TCGA-CV-A463 3 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 6084 ChimerSeq FusionScan TCGA_RNA-Seq NR4A2-GPD2 NR4A2 chr2 157187179 - GPD2 chr2 157332609 + Exonic hg19 HNSC TCGA-HD-A634 2 5'UTR-5'UTR Intra-chr q24.1 Transcription factor q24.1 Seq+ 6085 ChimerSeq FusionScan TCGA_RNA-Seq GPD2-NR4A2 GPD2 chr2 157332719 + NR4A2 chr2 157182840 - Exonic hg19 HNSC TCGA-HD-A634 2 Out-of-Frame Intra-chr q24.1 q24.1 Transcription factor Seq+ 6086 ChimerSeq FusionScan TCGA_RNA-Seq TMED10-TTLL5 TMED10 chr14 75643057 - TTLL5 chr14 76286349 + Exonic hg19 HNSC TCGA-CV-6961 7 In-Frame Intra-chr q24.3 q24.3 Seq+ 6087 ChimerSeq FusionScan TCGA_RNA-Seq EED-C11orf73 EED chr11 85961490 + C11orf73 chr11 86017286 + Exonic hg19 HNSC TCGA-CV-6961 2 In-Frame Intra-chr q14.2 Tumor suppressor gene 6088 ChimerSeq FusionScan TCGA_RNA-Seq EHBP1-MDH1 EHBP1 chr2 63101667 + MDH1 chr2 63821621 + Exonic hg19 HNSC TCGA-CQ-A4CH 4 In-Frame Intra-chr p15 p15 Seq+ 6089 ChimerSeq FusionScan TCGA_RNA-Seq CHST10-MAP4K4 CHST10 chr2 101019025 - MAP4K4 chr2 102440389 + Exonic hg19 HNSC TCGA-CQ-A4CH 3 In-Frame Intra-chr q11.2 Tumor suppressor gene q11.2 Seq+ 6090 ChimerSeq FusionScan TCGA_RNA-Seq MAPKBP1-ZC3H12A MAPKBP1 chr15 42067587 + ZC3H12A chr1 37941059 + Exonic hg19 HNSC TCGA-CV-A45Q 2 CDS-5'UTR Inter-chr q15.1 p34.3 6091 ChimerSeq FusionScan TCGA_RNA-Seq HIATL1-ZCCHC6 HIATL1 chr9 97177535 + ZCCHC6 chr9 88903659 - Exonic hg19 HNSC TCGA-CV-5966 2 Out-of-Frame Intra-chr q21.33 6092 ChimerSeq FusionScan TCGA_RNA-Seq NIPAL3-GRHL3 NIPAL3 chr1 24779994 + GRHL3 chr1 24690674 + Exonic hg19 HNSC TCGA-HD-8314 2 Out-of-Frame Intra-chr p36.11 p36.11 Transcription factor Seq+ 6093 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF18-SOCS6 ARHGEF18 chr19 7460133 + SOCS6 chr18 67991778 + Exonic hg19 HNSC TCGA-CR-7394 2 5'UTR-5'UTR Inter-chr p13.2 q22.2 6094 ChimerSeq FusionScan TCGA_RNA-Seq SNHG9-ANP32B SNHG9 chr16 2015130 + ANP32B chr9 100756912 + Exonic hg19 HNSC TCGA-BB-A6UM 2 5'UTR-CDS Inter-chr p13.3 q22.33 6095 ChimerSeq FusionScan TCGA_RNA-Seq SUFU-ADK SUFU chr10 104309863 + ADK chr10 76468078 + Exonic hg19 HNSC TCGA-4P-AA8J 3 In-Frame Intra-chr q24.32 Oncogene Tumor suppressor gene q22.2 Seq+ 6096 ChimerSeq FusionScan TCGA_RNA-Seq NLE1-FNDC8 NLE1 chr17 33466253 - FNDC8 chr17 33454060 + Exonic hg19 HNSC TCGA-DQ-7591 4 Out-of-Frame Intra-chr q12 q12 Seq+ 6097 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC8-C1orf172 DNAJC8 chr1 28559431 - C1orf172 chr1 27278903 - Exonic hg19 HNSC TCGA-DQ-7591 3 CDS-5'UTR Intra-chr p35.3 Seq+ 6098 ChimerSeq FusionScan TCGA_RNA-Seq WDTC1-TMEM39B WDTC1 chr1 27561442 + TMEM39B chr1 32540551 + Exonic hg19 HNSC TCGA-DQ-7591 2 5'UTR-CDS Intra-chr p36.11 p35.2 Seq+ 6099 ChimerSeq FusionScan TCGA_RNA-Seq IGF2R-PPAP2A IGF2R chr6 160448346 + PPAP2A chr5 54737736 - Exonic hg19 HNSC TCGA-DQ-7591 2 In-Frame Inter-chr q25.3 Oncogene Tumor suppressor gene 6100 ChimerSeq FusionScan TCGA_RNA-Seq PARD6G-CHST1 PARD6G chr18 77960592 - CHST1 chr11 45674156 - Exonic hg19 HNSC TCGA-DQ-7591 2 CDS-5'UTR Inter-chr q23 p11.2 Seq+ 6101 ChimerSeq FusionScan TCGA_RNA-Seq KPNA6-RHCE KPNA6 chr1 32573735 + RHCE chr1 25697031 - Exonic hg19 HNSC TCGA-DQ-7591 2 In-Frame Intra-chr p35.2 p36.11 Seq+ 6102 ChimerSeq FusionScan TCGA_RNA-Seq RLF-SMAP2 RLF chr1 40661436 + SMAP2 chr1 40872407 + Exonic hg19 HNSC TCGA-DQ-7591 2 In-Frame Intra-chr p34.2 Transcription factor p34.2 6103 ChimerSeq FusionScan TCGA_RNA-Seq TTN-ZNF385B TTN chr2 179527692 - ZNF385B chr2 180311497 - Exonic hg19 HNSC TCGA-HD-8224 2 In-Frame Intra-chr q31.2 CAMK:MLCK q31.3 Transcription factor 6104 ChimerSeq FusionScan TCGA_RNA-Seq RNF213-CSNK1D RNF213 chr17 78354787 + CSNK1D chr17 80211120 - Exonic hg19 HNSC TCGA-CV-7414 2 In-Frame Intra-chr q25.3 Oncogene q25.3 6105 ChimerSeq FusionScan TCGA_RNA-Seq NCEH1-CCDC50 NCEH1 chr3 172428636 - CCDC50 chr3 191087707 + Exonic hg19 HNSC TCGA-CV-7414 2 In-Frame Intra-chr q26.31 q28 6106 ChimerSeq FusionScan TCGA_RNA-Seq NEDD4L-UBE2G1 NEDD4L chr18 55833093 + UBE2G1 chr17 4210418 - Exonic hg19 HNSC TCGA-CV-7435 3 Out-of-Frame Inter-chr q21.31 Tumor suppressor gene p13.2 Seq+ 6107 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0247-NDUFA12 KIAA0247 chr14 70078545 + NDUFA12 chr12 95388033 - Exonic hg19 HNSC TCGA-CV-7435 2 5'UTR-CDS Inter-chr q22 6108 ChimerSeq FusionScan TCGA_RNA-Seq KPNA4-IFT80 KPNA4 chr3 160283001 - IFT80 chr3 160102434 - Exonic hg19 HNSC TCGA-CV-7413 2 CDS-5'UTR Intra-chr q25.33 q25.33 Seq+ 6109 ChimerSeq FusionScan TCGA_RNA-Seq FAT1-ACSL1 FAT1 chr4 187627716 - ACSL1 chr4 185724700 - Exonic hg19 HNSC TCGA-CN-4722 12 CDS-5'UTR Intra-chr q35.2 Tumor suppressor gene q35.1 Seq+ 6110 ChimerSeq FusionScan TCGA_RNA-Seq MYO1B-NFE2L2 MYO1B chr2 192110352 + NFE2L2 chr2 178098999 - Exonic hg19 HNSC TCGA-CQ-7068 2 5'UTR-5'UTR Intra-chr q32.3 q31.2 Oncogene Transcription factor 6111 ChimerSeq FusionScan TCGA_RNA-Seq NAA25-SLC25A21 NAA25 chr12 112525486 - SLC25A21 chr14 37154130 - Exonic hg19 HNSC TCGA-CV-6940 2 In-Frame Inter-chr q24.13 q13.3 Seq+ 6112 ChimerSeq FusionScan TCGA_RNA-Seq PARD6G-RFTN2 PARD6G chr18 78005159 - RFTN2 chr2 198437004 - Exonic hg19 HNSC TCGA-HD-7753 7 In-Frame Inter-chr q23 q33.1 Seq+ 6113 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1-PIBF1 WHSC1 chr4 1873269 + PIBF1 chr13 73539411 + Exonic hg19 HNSC TCGA-HD-7753 6 5'UTR-CDS Inter-chr Oncogene q21.33 Seq+ 6114 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1-PIBF1 WHSC1 chr4 1873269 + PIBF1 chr13 73572959 + Exonic hg19 HNSC TCGA-HD-7753 5 5'UTR-CDS Inter-chr Oncogene q21.33 Seq+ 6115 ChimerSeq FusionScan TCGA_RNA-Seq FILIP1L-IMPG2 FILIP1L chr3 99594915 - IMPG2 chr3 100988417 - Exonic hg19 HNSC TCGA-HD-7753 3 5'UTR-CDS Intra-chr q12.1 q12.3 Seq+ 6116 ChimerSeq FusionScan TCGA_RNA-Seq MKL1-ST13 MKL1 chr22 40948109 - ST13 chr22 41240913 - Exonic hg19 HNSC TCGA-HD-7753 2 5'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 6117 ChimerSeq FusionScan TCGA_RNA-Seq LAMC2-CCDC53 LAMC2 chr1 183200238 + CCDC53 chr12 102439897 - Exonic hg19 HNSC TCGA-HD-7753 2 In-Frame Inter-chr q25.3 Seq+ 6118 ChimerSeq FusionScan TCGA_RNA-Seq TUBGCP3-TFDP1 TUBGCP3 chr13 113219424 - TFDP1 chr13 114265310 + Exonic hg19 HNSC TCGA-CV-7416 6 In-Frame Intra-chr q34 Transcription factor Seq+ 6119 ChimerSeq FusionScan TCGA_RNA-Seq MFN2-CROCC MFN2 chr1 12042171 + CROCC chr1 17297130 + Exonic hg19 HNSC TCGA-CV-7416 2 5'UTR-CDS Intra-chr p36.22 p36.13 6120 ChimerSeq FusionScan TCGA_RNA-Seq COL1A1-THOC6 COL1A1 chr17 48269835 - THOC6 chr16 3076679 + Exonic hg19 HNSC TCGA-CV-7416 2 In-Frame Inter-chr q21.33 Oncogene p13.3 6121 ChimerSeq FusionScan TCGA_RNA-Seq LMBRD1-COL19A1 LMBRD1 chr6 70506704 - COL19A1 chr6 70778314 + Exonic hg19 HNSC TCGA-CR-7389 2 In-Frame Intra-chr q13 q13 6122 ChimerSeq FusionScan TCGA_RNA-Seq UBE3C-PTPRN2 UBE3C chr7 156932032 + PTPRN2 chr7 157997965 - Exonic hg19 HNSC TCGA-CR-7389 2 Out-of-Frame Intra-chr q36.3 q36.3 Seq+ 6123 ChimerSeq FusionScan TCGA_RNA-Seq SLAIN2-CWH43 SLAIN2 chr4 48385801 + CWH43 chr4 49009217 + Exonic hg19 HNSC TCGA-CN-4725 4 In-Frame Intra-chr p11 p11 Seq+ 6124 ChimerSeq FusionScan TCGA_RNA-Seq SLAIN2-CWH43 SLAIN2 chr4 48385801 + CWH43 chr4 49005751 + Exonic hg19 HNSC TCGA-CN-4725 3 In-Frame Intra-chr p11 p11 Seq+ 6125 ChimerSeq FusionScan TCGA_RNA-Seq APLP2-ST14 APLP2 chr11 129990713 + ST14 chr11 130066233 + Exonic hg19 HNSC TCGA-CV-6948 3 In-Frame Intra-chr q24.3 q24.3 6126 ChimerSeq FusionScan TCGA_RNA-Seq DTX2-CCDC146 DTX2 chr7 76112464 + CCDC146 chr7 76866263 + Exonic hg19 HNSC TCGA-CV-6948 3 Out-of-Frame Intra-chr q11.23 6127 ChimerSeq FusionScan TCGA_RNA-Seq ZNF410-LIN52 ZNF410 chr14 74376133 + LIN52 chr14 74665624 + Exonic hg19 HNSC TCGA-CV-6948 2 In-Frame Intra-chr q24.3 Transcription factor q24.3 Seq+ 6128 ChimerSeq FusionScan TCGA_RNA-Seq ERC1-WNT5B ERC1 chr12 1225199 + WNT5B chr12 1740463 + Exonic hg19 HNSC TCGA-CV-6948 2 5'UTR-5'UTR Intra-chr p13.33 Seq+ 6129 ChimerSeq FusionScan TCGA_RNA-Seq SLC39A6-MAST2 SLC39A6 chr18 33694059 - MAST2 chr1 46485267 + Exonic hg19 HNSC TCGA-CV-7235 3 Out-of-Frame Inter-chr q12.2 p34.1 AGC:MAST Seq+ 6130 ChimerSeq FusionScan TCGA_RNA-Seq PARD3-CUL2 PARD3 chr10 35103803 - CUL2 chr10 35360267 - Exonic hg19 HNSC TCGA-CR-7404 2 Out-of-Frame Intra-chr p11.21 p11.21 Tumor suppressor gene Seq+ 6131 ChimerSeq FusionScan TCGA_RNA-Seq SPATA6-FAF1 SPATA6 chr1 48918665 - FAF1 chr1 51061888 - Exonic hg19 HNSC TCGA-CR-6472 2 In-Frame Intra-chr p33 p32.3 6132 ChimerSeq FusionScan TCGA_RNA-Seq IKBKG-GAB3 IKBKG chrX 153775960 + GAB3 chrX 153944604 - Exonic hg19 HNSC TCGA-CV-6953 2 5'UTR-CDS Intra-chr q28 q28 Seq+ 6133 ChimerSeq FusionScan TCGA_RNA-Seq ROCK1-B4GALT6 ROCK1 chr18 18690778 - B4GALT6 chr18 29246335 - Exonic hg19 HNSC TCGA-CV-6953 2 Out-of-Frame Intra-chr q11.1 AGC:DMPK q12.1 Seq+ 6134 ChimerSeq FusionScan TCGA_RNA-Seq SYNE2-ITPK1 SYNE2 chr14 64486811 + ITPK1 chr14 93460342 - Exonic hg19 HNSC TCGA-CQ-6229 2 In-Frame Intra-chr q23.2 Seq+ 6135 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-COL16A1 CPSF6 chr12 69656342 + COL16A1 chr1 32118454 - Exonic hg19 HNSC TCGA-KU-A6H7 5 3'UTR-CDS Inter-chr q15 p35.2 Seq+ 6136 ChimerSeq FusionScan TCGA_RNA-Seq COL16A1-CPSF6 COL16A1 chr1 32119199 - CPSF6 chr12 69663291 + Exonic hg19 HNSC TCGA-KU-A6H7 3 CDS-3'UTR Inter-chr p35.2 q15 Seq+ 6137 ChimerSeq FusionScan TCGA_RNA-Seq MYO1B-NFE2L2 MYO1B chr2 192110352 + NFE2L2 chr2 178098999 - Exonic hg19 HNSC TCGA-CQ-7068 2 5'UTR-5'UTR Intra-chr q32.3 q31.2 Oncogene Transcription factor 6138 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175388437 - Exonic hg19 HNSC TCGA-CN-A63U 2 5'UTR-CDS Inter-chr q21.1 q35.2 6139 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA7-PRKCG NDUFA7 chr19 8381379 - PRKCG chr19 54406326 + Exonic hg19 HNSC TCGA-D6-6515 2 Out-of-Frame Intra-chr p13.2 q13.42 Seq+ 6140 ChimerSeq FusionScan TCGA_RNA-Seq DENND1A-NDUFA8 DENND1A chr9 126371714 - NDUFA8 chr9 124914687 - Exonic hg19 HNSC TCGA-H7-A76A 2 In-Frame Intra-chr q33.3 q33.2 Seq+ 6141 ChimerSeq FusionScan TCGA_RNA-Seq ESYT2-ZNF595 ESYT2 chr7 158590632 - ZNF595 chr4 59322 + Exonic hg19 HNSC TCGA-QK-A8ZA 3 Out-of-Frame Inter-chr q36.3 p16.3 Transcription factor Seq+ 6142 ChimerSeq FusionScan TCGA_RNA-Seq CUL5-ATM CUL5 chr11 107969256 + ATM chr11 108235808 + Exonic hg19 HNSC TCGA-CV-6952 2 In-Frame Intra-chr q22.3 Tumor suppressor gene q22.3 Atypical:PIKK Oncogene Tumor suppressor gene Seq+ 6143 ChimerSeq FusionScan TCGA_RNA-Seq VMP1-RPS6KB1 VMP1 chr17 57915758 + RPS6KB1 chr17 57987922 + Exonic hg19 HNSC TCGA-CV-6952 2 In-Frame Intra-chr q23.1 q23.1 Oncogene Seq+ 6144 ChimerSeq FusionScan TCGA_RNA-Seq TMEM11-UBAP1 TMEM11 chr17 21117403 - UBAP1 chr9 34220905 + Exonic hg19 HNSC TCGA-DQ-5629 2 Out-of-Frame Inter-chr p11.2 p13.3 Seq+ 6145 ChimerSeq FusionScan TCGA_RNA-Seq C12orf10-NFX1 C12orf10 chr12 53700104 + NFX1 chr9 33366626 + Exonic hg19 HNSC TCGA-CV-6956 2 In-Frame Inter-chr q13.13 p13.3 Transcription factor 6146 ChimerSeq FusionScan TCGA_RNA-Seq PARD3-CUL2 PARD3 chr10 35103803 - CUL2 chr10 35360267 - Exonic hg19 HNSC TCGA-CR-7404 2 Out-of-Frame Intra-chr p11.21 p11.21 Tumor suppressor gene Seq+ 6147 ChimerSeq FusionScan TCGA_RNA-Seq SNHG6-PPP1R42 SNHG6 chr8 67837671 - PPP1R42 chr8 67923066 - Exonic hg19 HNSC TCGA-UF-A7JD 3 3'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 6148 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC3-FOXN3 DNAJC3 chr13 96377506 + FOXN3 chr14 89817152 - Exonic hg19 HNSC TCGA-CV-7438 2 In-Frame Inter-chr q32.1 q32.11 Transcription factor 6149 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-RAB3IP FRS2 chr12 69864310 + RAB3IP chr12 70209143 + Exonic hg19 HNSC TCGA-CV-7438 2 5'UTR-CDS Intra-chr q15 q15 Seq+ 6150 ChimerSeq FusionScan TCGA_RNA-Seq TATDN1-MTSS1 TATDN1 chr8 125551265 - MTSS1 chr8 125580777 - Exonic hg19 HNSC TCGA-CV-7410 2 In-Frame Intra-chr q24.13 q24.13 Tumor suppressor gene 6151 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175388437 - Exonic hg19 HNSC TCGA-BB-4217 2 5'UTR-CDS Inter-chr q21.1 q35.2 6152 ChimerSeq FusionScan TCGA_RNA-Seq HEBP1-NCK1 HEBP1 chr12 13140085 - NCK1 chr3 136667100 + Exonic hg19 HNSC TCGA-QK-A8ZB 3 Out-of-Frame Inter-chr p13.1 q22.3 Seq+ 6153 ChimerSeq FusionScan TCGA_RNA-Seq PDIA6-DKK3 PDIA6 chr2 10952803 - DKK3 chr11 11990034 - Exonic hg19 HNSC TCGA-QK-A8ZB 3 Out-of-Frame Inter-chr p25.1 p15.3 Tumor suppressor gene Seq+ 6154 ChimerSeq FusionScan TCGA_RNA-Seq BRWD3-FAM155A BRWD3 chrX 80047352 - FAM155A chr13 107823134 - Exonic hg19 HNSC TCGA-QK-A8ZB 2 In-Frame Inter-chr q21.1 q33.3 Seq+ 6155 ChimerSeq FusionScan TCGA_RNA-Seq NCK1-HEBP1 NCK1 chr3 136665137 + HEBP1 chr12 13128413 - Exonic hg19 HNSC TCGA-QK-A8ZB 2 Out-of-Frame Inter-chr q22.3 p13.1 Seq+ 6156 ChimerSeq FusionScan TCGA_RNA-Seq STIP1-UBE2G1 STIP1 chr11 63953742 + UBE2G1 chr17 4210418 - Exonic hg19 HNSC TCGA-D6-A74Q 4 Out-of-Frame Inter-chr q13.1 p13.2 Seq+ 6157 ChimerSeq FusionScan TCGA_RNA-Seq SLC39A6-MAST2 SLC39A6 chr18 33694059 - MAST2 chr1 46485267 + Exonic hg19 HNSC TCGA-CV-7235 3 Out-of-Frame Inter-chr q12.2 p34.1 AGC:MAST Seq+ 6158 ChimerSeq FusionScan TCGA_RNA-Seq FBXO28-LYZL2 FBXO28 chr1 224302098 + LYZL2 chr10 30901829 - Exonic hg19 HNSC TCGA-CV-7406 2 Out-of-Frame Inter-chr q42.11 p11.23 Seq+ 6159 ChimerSeq FusionScan TCGA_RNA-Seq EPS8L2-AGPAT2 EPS8L2 chr11 709608 + AGPAT2 chr9 139569259 - Exonic hg19 HNSC TCGA-CQ-5333 7 Out-of-Frame Inter-chr p15.5 q34.3 Seq+ 6160 ChimerSeq FusionScan TCGA_RNA-Seq EPS8L2-AGPAT2 EPS8L2 chr11 706288 + AGPAT2 chr9 139569259 - Exonic hg19 HNSC TCGA-CQ-5333 6 5'UTR-CDS Inter-chr p15.5 q34.3 Seq+ 6161 ChimerSeq FusionScan TCGA_RNA-Seq ZFPM2-ANXA13 ZFPM2 chr8 106646585 + ANXA13 chr8 124693599 - Exonic hg19 HNSC TCGA-MZ-A5BI 5 Out-of-Frame Intra-chr q22.3 Transcription factor q24.13 Seq+ 6162 ChimerSeq FusionScan TCGA_RNA-Seq NFE2L3-TPST1 NFE2L3 chr7 26217742 + TPST1 chr7 65817491 + Exonic hg19 HNSC TCGA-MZ-A5BI 2 In-Frame Intra-chr p15.2 Transcription factor q11.21 Seq+ 6163 ChimerSeq FusionScan TCGA_RNA-Seq NFE2L3-TPST1 NFE2L3 chr7 26223404 + TPST1 chr7 65817491 + Exonic hg19 HNSC TCGA-MZ-A5BI 2 In-Frame Intra-chr p15.2 Transcription factor q11.21 Seq+ 6164 ChimerSeq FusionScan TCGA_RNA-Seq ZNF485-THADA ZNF485 chr10 44104798 + THADA chr2 43625278 - Exonic hg19 HNSC TCGA-CQ-A4C9 2 Out-of-Frame Inter-chr q11.21 Transcription factor p21 6165 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-COL16A1 CPSF6 chr12 69656342 + COL16A1 chr1 32118454 - Exonic hg19 HNSC TCGA-KU-A6H7 5 3'UTR-CDS Inter-chr q15 p35.2 Seq+ 6166 ChimerSeq FusionScan TCGA_RNA-Seq COL16A1-CPSF6 COL16A1 chr1 32119199 - CPSF6 chr12 69663291 + Exonic hg19 HNSC TCGA-KU-A6H7 3 CDS-3'UTR Inter-chr p35.2 q15 Seq+ 6167 ChimerSeq FusionScan TCGA_RNA-Seq PARD6G-RFTN2 PARD6G chr18 78005159 - RFTN2 chr2 198437004 - Exonic hg19 HNSC TCGA-HD-7753 7 In-Frame Inter-chr q23 q33.1 Seq+ 6168 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1-PIBF1 WHSC1 chr4 1873269 + PIBF1 chr13 73539411 + Exonic hg19 HNSC TCGA-HD-7753 6 5'UTR-CDS Inter-chr Oncogene q21.33 Seq+ 6169 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1-PIBF1 WHSC1 chr4 1873269 + PIBF1 chr13 73572959 + Exonic hg19 HNSC TCGA-HD-7753 5 5'UTR-CDS Inter-chr Oncogene q21.33 Seq+ 6170 ChimerSeq FusionScan TCGA_RNA-Seq FILIP1L-IMPG2 FILIP1L chr3 99594915 - IMPG2 chr3 100988417 - Exonic hg19 HNSC TCGA-HD-7753 3 5'UTR-CDS Intra-chr q12.1 q12.3 Seq+ 6171 ChimerSeq FusionScan TCGA_RNA-Seq MKL1-ST13 MKL1 chr22 40948109 - ST13 chr22 41240913 - Exonic hg19 HNSC TCGA-HD-7753 2 5'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 6172 ChimerSeq FusionScan TCGA_RNA-Seq LAMC2-CCDC53 LAMC2 chr1 183200238 + CCDC53 chr12 102439897 - Exonic hg19 HNSC TCGA-HD-7753 2 In-Frame Inter-chr q25.3 Seq+ 6173 ChimerSeq FusionScan TCGA_RNA-Seq CSNK2A1-SEPT9 CSNK2A1 chr20 524315 - SEPT9 chr17 75478225 + Exonic hg19 HNSC TCGA-QK-A8Z9 2 5'UTR-5'UTR Inter-chr p13 Oncogene 6174 ChimerSeq FusionScan TCGA_RNA-Seq FRMD6-BPIFB1 FRMD6 chr14 52037128 + BPIFB1 chr20 31873838 + Exonic hg19 HNSC TCGA-CQ-6227 3 5'UTR-5'UTR Inter-chr q22.1 q11.21 Seq+ 6175 ChimerSeq FusionScan TCGA_RNA-Seq DLG1-BDH1 DLG1 chr3 197023216 - BDH1 chr3 197241287 - Exonic hg19 HNSC TCGA-P3-A5QA 3 In-Frame Intra-chr q29 Tumor suppressor gene Seq+ 6176 ChimerSeq FusionScan TCGA_RNA-Seq RIOK3-TAF4B RIOK3 chr18 21033466 + TAF4B chr18 23969808 + Exonic hg19 HNSC TCGA-CV-7101 3 In-Frame Intra-chr q11.2 Atypical:RIO q11.2 Seq+ 6177 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-KIAA1456 TBL1XR1 chr3 176914908 - KIAA1456 chr8 12863710 + Exonic hg19 HNSC TCGA-CV-7101 2 5'UTR-5'UTR Inter-chr q26.32 p22 Seq+ 6178 ChimerSeq FusionScan TCGA_RNA-Seq NLRC5-CYB5B NLRC5 chr16 57051100 + CYB5B chr16 69492995 + Exonic hg19 HNSC TCGA-D6-8568 2 5'UTR-CDS Intra-chr q13 q22.1 Seq+ 6179 ChimerSeq FusionScan TCGA_RNA-Seq TMEM161A-KLHL26 TMEM161A chr19 19249234 - KLHL26 chr19 18778473 + Exonic hg19 HNSC TCGA-CR-5250 2 Out-of-Frame Intra-chr p13.11 p13.11 6180 ChimerSeq FusionScan TCGA_RNA-Seq C1orf174-RAD18 C1orf174 chr1 3809446 - RAD18 chr3 8923143 - Exonic hg19 HNSC TCGA-CR-6480 2 Out-of-Frame Inter-chr p36.32 p25.3 Seq+ 6181 ChimerSeq FusionScan TCGA_RNA-Seq ASH2L-C8orf86 ASH2L chr8 37968351 + C8orf86 chr8 38374030 - Exonic hg19 HNSC TCGA-CR-7364 2 In-Frame Intra-chr p11.23 p11.22 Seq+ 6182 ChimerSeq FusionScan TCGA_RNA-Seq C9orf86-KIAA1984 C9orf86 chr9 139702778 + KIAA1984 chr9 139697115 + Exonic hg19 HNSC TCGA-QK-AA3J 2 Out-of-Frame Intra-chr 6183 ChimerSeq FusionScan TCGA_RNA-Seq C14orf2-BRF1 C14orf2 chr14 104387806 - BRF1 chr14 105718916 - Exonic hg19 HNSC TCGA-CV-A45W 3 5'UTR-CDS Intra-chr q32.33 q32.33 Tumor suppressor gene Seq+ 6184 ChimerSeq FusionScan TCGA_RNA-Seq IL4R-RBBP6 IL4R chr16 27351594 + RBBP6 chr16 24557483 + Exonic hg19 HNSC TCGA-CN-A6V1 2 In-Frame Intra-chr p12.1 p12.1 6185 ChimerSeq FusionScan TCGA_RNA-Seq PTPN1-P2RX4 PTPN1 chr20 49127127 + P2RX4 chr12 121659715 + Exonic hg19 HNSC TCGA-CN-5364 2 In-Frame Inter-chr q13.13 Tumor suppressor gene q24.31 Seq+ 6186 ChimerSeq FusionScan TCGA_RNA-Seq BICD2-IPPK BICD2 chr9 95477534 - IPPK chr9 95420963 - Exonic hg19 HNSC TCGA-CN-5364 2 In-Frame Intra-chr q22.31 q22.31 6187 ChimerSeq FusionScan TCGA_RNA-Seq SEMA4B-MCM7 SEMA4B chr15 90728313 + MCM7 chr7 99691024 - Exonic hg19 HNSC TCGA-CV-7247 2 5'UTR-CDS Inter-chr q26.1 q22.1 6188 ChimerSeq FusionScan TCGA_RNA-Seq EPB41L1-TGM3 EPB41L1 chr20 34680735 + TGM3 chr20 2290302 + Exonic hg19 HNSC TCGA-CN-4733 2 5'UTR-CDS Intra-chr q11.23 p13 Tumor suppressor gene Seq+ 6189 ChimerSeq FusionScan TCGA_RNA-Seq RCL1-PLGRKT RCL1 chr9 4793227 + PLGRKT chr9 5361888 - Exonic hg19 HNSC TCGA-CN-4733 2 Out-of-Frame Intra-chr p24.1 p24.1 Seq+ 6190 ChimerSeq FusionScan TCGA_RNA-Seq MRPL30-FAM178B MRPL30 chr2 99797712 + FAM178B chr2 97626177 - Exonic hg19 HNSC TCGA-CV-A465 2 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 6191 ChimerSeq FusionScan TCGA_RNA-Seq RNF216-MTHFD1L RNF216 chr7 5764954 - MTHFD1L chr6 151330954 + Exonic hg19 HNSC TCGA-CV-7236 3 In-Frame Inter-chr p22.1 q25.1 Seq+ 6192 ChimerSeq FusionScan TCGA_RNA-Seq MIRLET7BHG-SCUBE1 MIRLET7BHG chr22 46499129 + SCUBE1 chr22 43735241 - Exonic hg19 HNSC TCGA-CN-6020 2 5'UTR-CDS Intra-chr q13.31 q13.2 Seq+ 6193 ChimerSeq FusionScan TCGA_RNA-Seq LIMK1-GGA1 LIMK1 chr7 73500174 + GGA1 chr22 38014454 + Exonic hg19 HNSC TCGA-CN-6019 2 Out-of-Frame Inter-chr q11.23 TKL:LISK q13.1 6194 ChimerSeq FusionScan TCGA_RNA-Seq ERP44-CHRDL2 ERP44 chr9 102814698 - CHRDL2 chr11 74429877 - Exonic hg19 HNSC TCGA-DQ-5624 4 In-Frame Inter-chr q31.1 q13.4 Seq+ 6195 ChimerSeq FusionScan TCGA_RNA-Seq ALG10B-IGFBP6 ALG10B chr12 38712260 + IGFBP6 chr12 53495828 + Exonic hg19 HNSC TCGA-DQ-5624 2 In-Frame Intra-chr q12 q13.13 Seq+ 6196 ChimerSeq FusionScan TCGA_RNA-Seq SLC2A11-LLPH SLC2A11 chr22 24217428 + LLPH chr12 66517798 - Exonic hg19 HNSC TCGA-DQ-5624 2 In-Frame Inter-chr q11.23 q14.3 Seq+ 6197 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175388437 - Exonic hg19 HNSC TCGA-CV-5441 2 5'UTR-CDS Inter-chr q21.1 q35.2 6198 ChimerSeq FusionScan TCGA_RNA-Seq MSI2-UTP18 MSI2 chr17 55478832 + UTP18 chr17 49374325 + Exonic hg19 HNSC TCGA-BB-4227 3 Out-of-Frame Intra-chr q22 q21.33 Seq+ 6199 ChimerSeq FusionScan TCGA_RNA-Seq DCAKD-EFTUD2 DCAKD chr17 43138255 - EFTUD2 chr17 42945265 - Exonic hg19 HNSC TCGA-BB-4227 2 5'UTR-CDS Intra-chr q21.31 q21.31 6200 ChimerSeq FusionScan TCGA_RNA-Seq RAP2A-ANAPC16 RAP2A chr13 98087038 + ANAPC16 chr10 73990123 + Exonic hg19 HNSC TCGA-BB-4227 2 Out-of-Frame Inter-chr q32.1 q22.1 6201 ChimerSeq FusionScan TCGA_RNA-Seq PARD3-ARMC4 PARD3 chr10 35103803 - ARMC4 chr10 28196706 - Exonic hg19 HNSC TCGA-CR-7377 2 Out-of-Frame Intra-chr p11.21 p12.1 Seq+ 6202 ChimerSeq FusionScan TCGA_RNA-Seq EIF4G3-KIF17 EIF4G3 chr1 21377358 - KIF17 chr1 21024981 - Exonic hg19 HNSC TCGA-CV-6954 2 5'UTR-CDS Intra-chr p36.12 p36.12 Seq+ 6203 ChimerSeq FusionScan TCGA_RNA-Seq FCHSD2-GUCY1A2 FCHSD2 chr11 72851075 - GUCY1A2 chr11 106856857 - Exonic hg19 HNSC TCGA-CN-5367 3 Out-of-Frame Intra-chr q13.4 q22.3 Oncogene Seq+ 6204 ChimerSeq FusionScan TCGA_RNA-Seq KPNA1-PARP14 KPNA1 chr3 122215283 - PARP14 chr3 122446658 + Exonic hg19 HNSC TCGA-CN-5367 2 In-Frame Intra-chr q21.1 q21.1 6205 ChimerSeq FusionScan TCGA_RNA-Seq PBRM1-GLT8D1 PBRM1 chr3 52712515 - GLT8D1 chr3 52734512 - Exonic hg19 HNSC TCGA-QK-A6VC 3 CDS-5'UTR Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 Seq+ 6206 ChimerSeq FusionScan TCGA_RNA-Seq GMNN-C6orf62 GMNN chr6 24777525 + C6orf62 chr6 24709139 - Exonic hg19 HNSC TCGA-CN-6996 2 In-Frame Intra-chr p22.3 p22.3 6207 ChimerSeq FusionScan TCGA_RNA-Seq ZDHHC13-SERGEF ZDHHC13 chr11 19138823 + SERGEF chr11 18014540 - Exonic hg19 HNSC TCGA-CN-6996 2 Out-of-Frame Intra-chr p15.1 p15.1 6208 ChimerSeq FusionScan TCGA_RNA-Seq GRHL2-CRMP1 GRHL2 chr8 102505017 + CRMP1 chr4 5830395 - Exonic hg19 HNSC TCGA-IQ-A61H 2 Out-of-Frame Inter-chr q22.3 Transcription factor p16.2 Seq+ 6209 ChimerSeq FusionScan TCGA_RNA-Seq OBSCN-CASZ1 OBSCN chr1 228412435 + CASZ1 chr1 10725628 - Exonic hg19 HNSC TCGA-BB-4223 2 In-Frame Intra-chr q42.13 p36.22 Transcription factor Seq+ 6210 ChimerSeq FusionScan TCGA_RNA-Seq AK3-IL33 AK3 chr9 4740936 - IL33 chr9 6241683 + Exonic hg19 HNSC TCGA-C9-A47Z 9 CDS-5'UTR Intra-chr p24.1 p24.1 Seq+ 6211 ChimerSeq FusionScan TCGA_RNA-Seq WDR36-GPNMB WDR36 chr5 110440516 + GPNMB chr7 23292925 + Exonic hg19 HNSC TCGA-C9-A47Z 2 In-Frame Inter-chr q22.1 p15.3 6212 ChimerSeq FusionScan TCGA_RNA-Seq RB1-HTR2C RB1 chr13 48881542 + HTR2C chrX 114141151 + Exonic hg19 HNSC TCGA-D6-6827 2 Out-of-Frame Inter-chr q14.2 Oncogene Tumor suppressor gene q23 Seq+ 6213 ChimerSeq FusionScan TCGA_RNA-Seq NT5DC1-SEC63 NT5DC1 chr6 116436933 + SEC63 chr6 108204350 - Exonic hg19 HNSC TCGA-MT-A7BN 4 In-Frame Intra-chr q22.1 q21 Seq+ 6214 ChimerSeq FusionScan TCGA_RNA-Seq ZAK-C12orf35 ZAK chr2 174074563 + C12orf35 chr12 32140172 + Exonic hg19 HNSC TCGA-CV-5436 2 Out-of-Frame Inter-chr TKL:MLK 6215 ChimerSeq FusionScan TCGA_RNA-Seq KIAA2026-PLGRKT KIAA2026 chr9 6007194 - PLGRKT chr9 5361187 - Exonic hg19 HNSC TCGA-CV-A45X 6 In-Frame Intra-chr p24.1 p24.1 Seq+ 6216 ChimerSeq FusionScan TCGA_RNA-Seq GNA12-PHC3 GNA12 chr7 2883486 - PHC3 chr3 169896726 - Exonic hg19 HNSC TCGA-CQ-A4CA 2 Out-of-Frame Inter-chr p22.2 q26.2 Tumor suppressor gene Seq+ 6217 ChimerSeq FusionScan TCGA_RNA-Seq ATP5C1-MGEA5 ATP5C1 chr10 7841157 + MGEA5 chr10 103572884 - Exonic hg19 HNSC TCGA-CQ-A4CA 2 In-Frame Intra-chr p14 q24.32 6218 ChimerSeq FusionScan TCGA_RNA-Seq DYRK1A-IFNGR2 DYRK1A chr21 38739930 + IFNGR2 chr21 34793786 + Exonic hg19 HNSC TCGA-D6-A4Z9 2 5'UTR-CDS Intra-chr q22.13 CMGC:DYRK Seq+ 6219 ChimerSeq FusionScan TCGA_RNA-Seq ABCA1-NDUFB2 ABCA1 chr9 107690215 - NDUFB2 chr7 140402665 + Exonic hg19 HNSC TCGA-CQ-6223 2 5'UTR-CDS Inter-chr q31.1 q34 6220 ChimerSeq FusionScan TCGA_RNA-Seq RAI1-PEMT RAI1 chr17 17627473 + PEMT chr17 17480341 - Exonic hg19 HNSC TCGA-BA-6869 2 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 6221 ChimerSeq FusionScan TCGA_RNA-Seq PEMT-RAI1 PEMT chr17 17480233 - RAI1 chr17 17627341 + Exonic hg19 HNSC TCGA-BA-6869 2 CDS-5'UTR Intra-chr p11.2 p11.2 Seq+ 6222 ChimerSeq FusionScan TCGA_RNA-Seq TGIF1-C9orf3 TGIF1 chr18 3456578 + C9orf3 chr9 97848963 + Exonic hg19 HNSC TCGA-BA-6869 2 CDS-3'UTR Inter-chr p11.31 Transcription factor q22.32 6223 ChimerSeq FusionScan TCGA_RNA-Seq KLHL2-OPTN KLHL2 chr4 166220808 + OPTN chr10 13165994 + Exonic hg19 HNSC TCGA-BA-6869 2 In-Frame Inter-chr q32.3 p13 6224 ChimerSeq FusionScan TCGA_RNA-Seq RB1-HTR2C RB1 chr13 48881542 + HTR2C chrX 114141151 + Exonic hg19 HNSC TCGA-D6-6827 2 Out-of-Frame Inter-chr q14.2 Oncogene Tumor suppressor gene q23 Seq+ 6225 ChimerSeq FusionScan TCGA_RNA-Seq ZMAT5-NIPSNAP1 ZMAT5 chr22 30162860 - NIPSNAP1 chr22 29957851 - Exonic hg19 HNSC TCGA-T3-A92M 2 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 6226 ChimerSeq FusionScan TCGA_RNA-Seq NEDD4L-CDH19 NEDD4L chr18 55833093 + CDH19 chr18 64239553 - Exonic hg19 HNSC TCGA-CN-5359 3 5'UTR-5'UTR Intra-chr q21.31 Tumor suppressor gene q22.1 Seq+ 6227 ChimerSeq FusionScan TCGA_RNA-Seq WAC-MRPL46 WAC chr10 28824686 + MRPL46 chr15 89003094 - Exonic hg19 HNSC TCGA-CV-7099 2 In-Frame Inter-chr p12.1 q25.3 6228 ChimerSeq FusionScan TCGA_RNA-Seq HIRA-BCL2L13 HIRA chr22 19418962 - BCL2L13 chr22 18209442 + Exonic hg19 HNSC TCGA-CV-7255 3 Out-of-Frame Intra-chr q11.21 Tumor suppressor gene q11.21 Seq+ 6229 ChimerSeq FusionScan TCGA_RNA-Seq TLN1-CREB3 TLN1 chr9 35732071 - CREB3 chr9 35732992 + Exonic hg19 HNSC TCGA-QK-A64Z 9 5'UTR-CDS Intra-chr p13.3 p13.3 Transcription factor Seq+ 6230 ChimerSeq FusionScan TCGA_RNA-Seq CREB3-TLN1 CREB3 chr9 35733482 + TLN1 chr9 35711789 - Exonic hg19 HNSC TCGA-QK-A64Z 7 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 6231 ChimerSeq FusionScan TCGA_RNA-Seq CREB3-TLN1 CREB3 chr9 35733279 + TLN1 chr9 35711789 - Exonic hg19 HNSC TCGA-QK-A64Z 2 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 6232 ChimerSeq FusionScan TCGA_RNA-Seq RPS18-EVL RPS18 chr6 33239899 + EVL chr14 100607516 + Exonic hg19 HNSC TCGA-MT-A67A 2 3'UTR-CDS Inter-chr q32.2 6233 ChimerSeq FusionScan TCGA_RNA-Seq PHACTR2-PLAGL1 PHACTR2 chr6 143999346 + PLAGL1 chr6 144290115 - Exonic hg19 HNSC TCGA-BA-4076 2 CDS-5'UTR Intra-chr q24.2 q24.2 Tumor suppressor gene Transcription factor Seq+ 6234 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC19-ADK DNAJC19 chr3 180705810 - ADK chr10 76285013 + Exonic hg19 HNSC TCGA-CV-7103 5 In-Frame Inter-chr q26.33 q22.2 Seq+ 6235 ChimerSeq FusionScan TCGA_RNA-Seq ACTL6A-ALG3 ACTL6A chr3 179288029 + ALG3 chr3 183963600 - Exonic hg19 HNSC TCGA-CV-7103 4 In-Frame Intra-chr q26.33 q27.1 Seq+ 6236 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC19-ADK DNAJC19 chr3 180705810 - ADK chr10 76349039 + Exonic hg19 HNSC TCGA-CV-7103 3 In-Frame Inter-chr q26.33 q22.2 Seq+ 6237 ChimerSeq FusionScan TCGA_RNA-Seq CCDC59-TMTC2 CCDC59 chr12 82750738 - TMTC2 chr12 83289596 + Exonic hg19 HNSC TCGA-CN-6989 2 Out-of-Frame Intra-chr q21.31 q21.31 6238 ChimerSeq FusionScan TCGA_RNA-Seq SIK3-MRPS9 SIK3 chr11 116968858 - MRPS9 chr2 105687770 + Exonic hg19 HNSC TCGA-D6-A6EM 2 In-Frame Inter-chr q23.3 q12.1 6239 ChimerSeq FusionScan TCGA_RNA-Seq SEC23B-ZCCHC7 SEC23B chr20 18506576 + ZCCHC7 chr9 37349353 + Exonic hg19 HNSC TCGA-CV-A45T 2 In-Frame Inter-chr p11.23 p13.2 Seq+ 6240 ChimerSeq FusionScan TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105614952 - OBFC1 chr10 105642599 - Exonic hg19 HNSC TCGA-DQ-5630 4 Out-of-Frame Intra-chr q24.33 Seq+ 6241 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57697534 + VMP1 chr17 57915655 + Exonic hg19 HNSC TCGA-DQ-5630 3 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 6242 ChimerSeq FusionScan TCGA_RNA-Seq TOM1L2-ATPAF2 TOM1L2 chr17 17810760 - ATPAF2 chr17 17928018 - Exonic hg19 HNSC TCGA-CV-7253 5 In-Frame Intra-chr p11.2 Tumor suppressor gene p11.2 Seq+ 6243 ChimerSeq FusionScan TCGA_RNA-Seq DHCR24-PCNXL2 DHCR24 chr1 55319709 - PCNXL2 chr1 233314921 - Exonic hg19 HNSC TCGA-CV-7253 5 In-Frame Intra-chr p32.3 Seq+ 6244 ChimerSeq FusionScan TCGA_RNA-Seq PXN-MSI1 PXN chr12 120659425 - MSI1 chr12 120780908 - Exonic hg19 HNSC TCGA-CV-7253 2 CDS-3'UTR Intra-chr q24.23 q24.31 Seq+ 6245 ChimerSeq FusionScan TCGA_RNA-Seq BDP1-PMCH BDP1 chr5 70779723 + PMCH chr12 102590479 - Exonic hg19 HNSC TCGA-BB-A5HY 2 In-Frame Inter-chr q23.2 6246 ChimerSeq FusionScan TCGA_RNA-Seq CXCL1-AFP CXCL1 chr4 74735706 + AFP chr4 74319481 + Exonic hg19 HNSC TCGA-IQ-A61I 3 5'UTR-5'UTR Intra-chr q13.3 q13.3 Seq+ 6247 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175394270 - Exonic hg19 HNSC TCGA-CQ-7072 2 5'UTR-CDS Inter-chr q21.1 q35.2 6248 ChimerSeq FusionScan TCGA_RNA-Seq TMEM117-KIF16B TMEM117 chr12 44537427 + KIF16B chr20 16293063 - Exonic hg19 HNSC TCGA-CQ-7072 2 In-Frame Inter-chr q12 p12.1 Seq+ 6249 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 HNSC TCGA-CQ-7072 2 Out-of-Frame Intra-chr q22.2 q22.2 6250 ChimerSeq FusionScan TCGA_RNA-Seq SDCBP-PPHLN1 SDCBP chr8 59465862 + PPHLN1 chr12 42729684 + Exonic hg19 HNSC TCGA-BA-5557 2 5'UTR-5'UTR Inter-chr q12.1 q12 6251 ChimerSeq FusionScan TCGA_RNA-Seq NT5DC1-SEC63 NT5DC1 chr6 116436933 + SEC63 chr6 108204350 - Exonic hg19 HNSC TCGA-MT-A7BN 4 In-Frame Intra-chr q22.1 q21 Seq+ 6252 ChimerSeq FusionScan TCGA_RNA-Seq P2RY6-ARHGEF17 P2RY6 chr11 72975694 + ARHGEF17 chr11 73057927 + Exonic hg19 HNSC TCGA-DQ-5631 2 5'UTR-CDS Intra-chr q13.4 q13.4 6253 ChimerSeq FusionScan TCGA_RNA-Seq KPNA6-EIF3I KPNA6 chr1 32573735 + EIF3I chr1 32694099 + Exonic hg19 HNSC TCGA-CR-7379 3 Out-of-Frame Intra-chr p35.2 p35.2 Seq+ 6254 ChimerSeq FusionScan TCGA_RNA-Seq ABCA1-NDUFB2 ABCA1 chr9 107690215 - NDUFB2 chr7 140402665 + Exonic hg19 HNSC TCGA-CQ-6223 2 5'UTR-CDS Inter-chr q31.1 q34 6255 ChimerSeq FusionScan TCGA_RNA-Seq SEMA4B-MCM7 SEMA4B chr15 90728313 + MCM7 chr7 99691024 - Exonic hg19 HNSC TCGA-CV-7247 2 5'UTR-CDS Inter-chr q26.1 q22.1 6256 ChimerSeq FusionScan TCGA_RNA-Seq USP14-THOC1 USP14 chr18 180339 + THOC1 chr18 216633 - Exonic hg19 HNSC TCGA-IQ-A61G 2 In-Frame Intra-chr p11.32 p11.32 Seq+ 6257 ChimerSeq FusionScan TCGA_RNA-Seq TRIO-PPP2R5E TRIO chr5 14280545 + PPP2R5E chr14 63848875 - Exonic hg19 HNSC TCGA-BA-5153 2 In-Frame Inter-chr p15.2 q23.2 Seq+ 6258 ChimerSeq FusionScan TCGA_RNA-Seq CDKN2A-MTAP CDKN2A chr9 21974676 - MTAP chr9 21815431 + Exonic hg19 HNSC TCGA-CQ-7063 3 In-Frame Intra-chr p21.3 Oncogene Tumor suppressor gene p21.3 Tumor suppressor gene Seq+ 6259 ChimerSeq FusionScan TCGA_RNA-Seq TSC1-DOLPP1 TSC1 chr9 135796749 - DOLPP1 chr9 131848987 + Exonic hg19 HNSC TCGA-CR-6487 4 In-Frame Intra-chr q34.13 Oncogene Tumor suppressor gene q34.11 Seq+ 6260 ChimerSeq FusionScan TCGA_RNA-Seq TMX2-CTNND1 TMX2 chr11 57506732 + CTNND1 chr11 57561481 + Exonic hg19 HNSC TCGA-CR-6487 2 In-Frame Intra-chr q12.1 q12.1 Tumor suppressor gene 6261 ChimerSeq FusionScan TCGA_RNA-Seq THBS1-NRG1 THBS1 chr15 39876623 + NRG1 chr8 32585466 + Exonic hg19 HNSC TCGA-CN-5370 4 Out-of-Frame Inter-chr q14 Oncogene Tumor suppressor gene p12 Seq+ 6262 ChimerSeq FusionScan TCGA_RNA-Seq EFTUD2-KRT24 EFTUD2 chr17 42956923 - KRT24 chr17 38858185 - Exonic hg19 HNSC TCGA-CN-5370 3 In-Frame Intra-chr q21.31 q21.2 Seq+ 6263 ChimerSeq FusionScan TCGA_RNA-Seq GOLIM4-SLC40A1 GOLIM4 chr3 167742313 - SLC40A1 chr2 190440046 - Exonic hg19 HNSC TCGA-CV-7261 3 In-Frame Inter-chr q26.2 q32.2 Seq+ 6264 ChimerSeq FusionScan TCGA_RNA-Seq ZHX2-DERL1 ZHX2 chr8 123794185 + DERL1 chr8 124037290 - Exonic hg19 HNSC TCGA-CV-7261 2 5'UTR-CDS Intra-chr q24.13 Tumor suppressor gene Transcription factor q24.13 6265 ChimerSeq FusionScan TCGA_RNA-Seq BRI3-FIS1 BRI3 chr7 97911765 + FIS1 chr7 100884187 - Exonic hg19 HNSC TCGA-CV-7254 2 Out-of-Frame Intra-chr q21.3 q22.1 6266 ChimerSeq FusionScan TCGA_RNA-Seq KEAP1-RAD23A KEAP1 chr19 10610070 - RAD23A chr19 13063502 + Exonic hg19 HNSC TCGA-CV-7254 2 In-Frame Intra-chr p13.2 Oncogene p13.13 6267 ChimerSeq FusionScan TCGA_RNA-Seq UQCRC2-NFU1 UQCRC2 chr16 21987564 + NFU1 chr2 69627670 - Exonic hg19 HNSC TCGA-BB-7871 2 In-Frame Inter-chr p13.3 6268 ChimerSeq FusionScan TCGA_RNA-Seq TMEM11-UBAP1 TMEM11 chr17 21117403 - UBAP1 chr9 34220905 + Exonic hg19 HNSC TCGA-DQ-5629 2 Out-of-Frame Inter-chr p11.2 p13.3 Seq+ 6269 ChimerSeq FusionScan TCGA_RNA-Seq PTPRF-ST3GAL3 PTPRF chr1 44019612 + ST3GAL3 chr1 44360054 + Exonic hg19 HNSC TCGA-CV-7097 3 Out-of-Frame Intra-chr p34.2 p34.1 Seq+ 6270 ChimerSeq FusionScan TCGA_RNA-Seq MCTP1-TNC MCTP1 chr5 94259666 - TNC chr9 117783546 - Exonic hg19 HNSC TCGA-CV-7097 2 In-Frame Inter-chr q15 q33.1 Seq+ 6271 ChimerSeq FusionScan TCGA_RNA-Seq STAG1-SPSB4 STAG1 chr3 136117590 - SPSB4 chr3 140865983 + Exonic hg19 HNSC TCGA-UF-A7JA 2 Out-of-Frame Intra-chr q22.3 q23 Seq+ 6272 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-IVNS1ABP CPSF6 chr12 69656342 + IVNS1ABP chr1 185274775 - Exonic hg19 HNSC TCGA-CN-5365 2 3'UTR-CDS Inter-chr q15 q25.3 6273 ChimerSeq FusionScan TCGA_RNA-Seq SETX-EIF3B SETX chr9 135172273 - EIF3B chr7 2416584 + Exonic hg19 HNSC TCGA-UF-A71B 2 In-Frame Inter-chr q34.13 p22.3 6274 ChimerSeq FusionScan TCGA_RNA-Seq P2RY6-ARHGEF17 P2RY6 chr11 72975694 + ARHGEF17 chr11 73057927 + Exonic hg19 HNSC TCGA-DQ-5631 2 5'UTR-CDS Intra-chr q13.4 q13.4 6275 ChimerSeq FusionScan TCGA_RNA-Seq SELK-DSP SELK chr3 53925796 - DSP chr6 7582874 + Exonic hg19 HNSC TCGA-CV-A45U 2 Out-of-Frame Inter-chr p24.3 Tumor suppressor gene 6276 ChimerSeq FusionScan TCGA_RNA-Seq FMR1-FIP1L1 FMR1 chrX 146993748 + FIP1L1 chr4 54265896 + Exonic hg19 HNSC TCGA-CV-A45U 2 In-Frame Inter-chr q27.3 q12 6277 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0391-FAM177A1 KIAA0391 chr14 35649983 + FAM177A1 chr14 35546355 + Exonic hg19 HNSC TCGA-CV-A45U 2 In-Frame Intra-chr q13.2 q13.2 Seq+ 6278 ChimerSeq FusionScan TCGA_RNA-Seq LRP5-CLPB LRP5 chr11 68080273 + CLPB chr11 72070052 - Exonic hg19 HNSC TCGA-CV-7418 7 In-Frame Intra-chr q13.2 q13.4 Seq+ 6279 ChimerSeq FusionScan TCGA_RNA-Seq RORA-ANXA2 RORA chr15 60884585 - ANXA2 chr15 60678285 - Exonic hg19 HNSC TCGA-CV-7418 5 In-Frame Intra-chr q22.2 Transcription factor q22.2 Seq+ 6280 ChimerSeq FusionScan TCGA_RNA-Seq LRP5-CLPB LRP5 chr11 68080273 + CLPB chr11 72084058 - Exonic hg19 HNSC TCGA-CV-7418 3 In-Frame Intra-chr q13.2 q13.4 Seq+ 6281 ChimerSeq FusionScan TCGA_RNA-Seq LAMB3-NAB1 LAMB3 chr1 209795880 - NAB1 chr2 191537826 + Exonic hg19 HNSC TCGA-D6-6825 3 Out-of-Frame Inter-chr q32.2 q32.2 Seq+ 6282 ChimerSeq FusionScan TCGA_RNA-Seq IKBKG-GAB3 IKBKG chrX 153775960 + GAB3 chrX 153944604 - Exonic hg19 HNSC TCGA-CV-6953 2 5'UTR-CDS Intra-chr q28 q28 Seq+ 6283 ChimerSeq FusionScan TCGA_RNA-Seq ROCK1-B4GALT6 ROCK1 chr18 18690778 - B4GALT6 chr18 29246335 - Exonic hg19 HNSC TCGA-CV-6953 2 Out-of-Frame Intra-chr q11.1 AGC:DMPK q12.1 Seq+ 6284 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC3-FOXN3 DNAJC3 chr13 96377506 + FOXN3 chr14 89817152 - Exonic hg19 HNSC TCGA-CV-7438 2 In-Frame Inter-chr q32.1 q32.11 Transcription factor 6285 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-RAB3IP FRS2 chr12 69864310 + RAB3IP chr12 70209143 + Exonic hg19 HNSC TCGA-CV-7438 2 5'UTR-CDS Intra-chr q15 q15 Seq+ 6286 ChimerSeq FusionScan TCGA_RNA-Seq TMEM161A-KLHL26 TMEM161A chr19 19249234 - KLHL26 chr19 18778473 + Exonic hg19 HNSC TCGA-CR-5250 2 Out-of-Frame Intra-chr p13.11 p13.11 6287 ChimerSeq FusionScan TCGA_RNA-Seq LYN-NTRK3 LYN chr8 56866543 + NTRK3 chr15 88576276 - Exonic hg19 HNSC TCGA-CN-6997 5 In-Frame Inter-chr q12.1 TK:Src q25.3 Oncogene Tumor suppressor gene Seq+ 6288 ChimerSeq FusionScan TCGA_RNA-Seq CD58-CXCL13 CD58 chr1 117064527 - CXCL13 chr4 78532141 + Exonic hg19 HNSC TCGA-CR-6472 2 Out-of-Frame Inter-chr p13.1 q21.1 6289 ChimerSeq FusionScan TCGA_RNA-Seq SPATA6-FAF1 SPATA6 chr1 48918665 - FAF1 chr1 51061888 - Exonic hg19 HNSC TCGA-CR-6472 2 In-Frame Intra-chr p33 p32.3 6290 ChimerSeq FusionScan TCGA_RNA-Seq CLCC1-PABPC1 CLCC1 chr1 109505982 - PABPC1 chr8 101717901 - Exonic hg19 HNSC TCGA-BA-A4IG 2 5'UTR-CDS Inter-chr p13.3 q22.3 6291 ChimerSeq FusionScan TCGA_RNA-Seq CCT2-CTSL2 CCT2 chr12 69980124 + CTSL2 chr9 99795330 - Exonic hg19 HNSC TCGA-CQ-A4C6 2 Out-of-Frame Inter-chr q15 6292 ChimerSeq FusionScan TCGA_RNA-Seq CEP135-DCAF13 CEP135 chr4 56830568 + DCAF13 chr8 104433202 + Exonic hg19 HNSC TCGA-CQ-A4C6 2 In-Frame Inter-chr q12 q22.3 6293 ChimerSeq FusionScan TCGA_RNA-Seq PTPRF-ST3GAL3 PTPRF chr1 44019612 + ST3GAL3 chr1 44360054 + Exonic hg19 HNSC TCGA-CV-7097 3 Out-of-Frame Intra-chr p34.2 p34.1 Seq+ 6294 ChimerSeq FusionScan TCGA_RNA-Seq MCTP1-TNC MCTP1 chr5 94259666 - TNC chr9 117783546 - Exonic hg19 HNSC TCGA-CV-7097 2 In-Frame Inter-chr q15 q33.1 Seq+ 6295 ChimerSeq FusionScan TCGA_RNA-Seq SH2D3A-GPM6A SH2D3A chr19 6767397 - GPM6A chr4 176573138 - Exonic hg19 HNSC TCGA-CQ-A4CI 2 5'UTR-CDS Inter-chr p13.3 q34.2 Seq+ 6296 ChimerSeq FusionScan TCGA_RNA-Seq DNM3-RFWD2 DNM3 chr1 171810957 + RFWD2 chr1 176015460 - Exonic hg19 HNSC TCGA-CQ-A4CI 2 In-Frame Intra-chr q24.3 q25.2 Tumor suppressor gene 6297 ChimerSeq FusionScan TCGA_RNA-Seq RPS27A-MIR4426 RPS27A chr2 55462098 + MIR4426 chr2 55461299 + Exonic hg19 HNSC TCGA-CV-6955 2 CDS-5'UTR Intra-chr p16.1 q31.2 6298 ChimerSeq FusionScan TCGA_RNA-Seq P4HB-CDK5RAP3 P4HB chr17 79813328 - CDK5RAP3 chr17 46055197 + Exonic hg19 HNSC TCGA-CV-6955 2 In-Frame Intra-chr q25.3 q21.32 6299 ChimerSeq FusionScan TCGA_RNA-Seq SEC23B-ZCCHC7 SEC23B chr20 18506576 + ZCCHC7 chr9 37349353 + Exonic hg19 HNSC TCGA-CV-A45T 2 In-Frame Inter-chr p11.23 p13.2 Seq+ 6300 ChimerSeq FusionScan TCGA_RNA-Seq SH2D3A-GPM6A SH2D3A chr19 6767397 - GPM6A chr4 176573138 - Exonic hg19 HNSC TCGA-CQ-A4CI 2 5'UTR-CDS Inter-chr p13.3 q34.2 Seq+ 6301 ChimerSeq FusionScan TCGA_RNA-Seq DNM3-RFWD2 DNM3 chr1 171810957 + RFWD2 chr1 176015460 - Exonic hg19 HNSC TCGA-CQ-A4CI 2 In-Frame Intra-chr q24.3 q25.2 Tumor suppressor gene 6302 ChimerSeq FusionScan TCGA_RNA-Seq FCHSD2-GUCY1A2 FCHSD2 chr11 72851075 - GUCY1A2 chr11 106856857 - Exonic hg19 HNSC TCGA-CN-5367 3 Out-of-Frame Intra-chr q13.4 q22.3 Oncogene Seq+ 6303 ChimerSeq FusionScan TCGA_RNA-Seq KPNA1-PARP14 KPNA1 chr3 122215283 - PARP14 chr3 122446658 + Exonic hg19 HNSC TCGA-CN-5367 2 In-Frame Intra-chr q21.1 q21.1 6304 ChimerSeq FusionScan TCGA_RNA-Seq MOB3A-DAND5 MOB3A chr19 2078138 - DAND5 chr19 13084202 + Exonic hg19 HNSC TCGA-CV-A461 2 Out-of-Frame Intra-chr p13.3 p13.13 Seq+ 6305 ChimerSeq FusionScan TCGA_RNA-Seq TLN1-CREB3 TLN1 chr9 35732071 - CREB3 chr9 35732992 + Exonic hg19 HNSC TCGA-QK-A64Z 9 5'UTR-CDS Intra-chr p13.3 p13.3 Transcription factor Seq+ 6306 ChimerSeq FusionScan TCGA_RNA-Seq CREB3-TLN1 CREB3 chr9 35733482 + TLN1 chr9 35711789 - Exonic hg19 HNSC TCGA-QK-A64Z 7 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 6307 ChimerSeq FusionScan TCGA_RNA-Seq CREB3-TLN1 CREB3 chr9 35733279 + TLN1 chr9 35711789 - Exonic hg19 HNSC TCGA-QK-A64Z 2 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 6308 ChimerSeq FusionScan TCGA_RNA-Seq MAPKBP1-ZC3H12A MAPKBP1 chr15 42067587 + ZC3H12A chr1 37941059 + Exonic hg19 HNSC TCGA-CV-A45Q 2 CDS-5'UTR Inter-chr q15.1 p34.3 6309 ChimerSeq FusionScan TCGA_RNA-Seq LIN54-SEC31A LIN54 chr4 83857133 - SEC31A chr4 83795904 - Exonic hg19 HNSC TCGA-CN-6023 2 In-Frame Intra-chr q21.22 Transcription factor q21.22 Seq+ 6310 ChimerSeq FusionScan TCGA_RNA-Seq NLRC5-CYB5B NLRC5 chr16 57051100 + CYB5B chr16 69492995 + Exonic hg19 HNSC TCGA-D6-8568 2 5'UTR-CDS Intra-chr q13 q22.1 Seq+ 6311 ChimerSeq FusionScan TCGA_RNA-Seq CREBBP-ATG10 CREBBP chr16 3900297 - ATG10 chr5 81354313 + Exonic hg19 HNSC TCGA-CR-7374 2 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene q14.1 Seq+ 6312 ChimerSeq FusionScan TCGA_RNA-Seq TMEM165-KIAA1211 TMEM165 chr4 56290810 + KIAA1211 chr4 57138486 + Exonic hg19 HNSC TCGA-QK-A8Z8 2 CDS-5'UTR Intra-chr q12 q12 Seq+ 6313 ChimerSeq FusionScan TCGA_RNA-Seq KBTBD2-PDE1C KBTBD2 chr7 32931147 - PDE1C chr7 32209568 - Exonic hg19 HNSC TCGA-BA-A8YP 4 5'UTR-CDS Intra-chr p14.3 p14.3 Seq+ 6314 ChimerSeq FusionScan TCGA_RNA-Seq KDM6A-DLL1 KDM6A chrX 44833960 + DLL1 chr6 170595386 - Exonic hg19 HNSC TCGA-BA-A8YP 2 Out-of-Frame Inter-chr p11.3 Oncogene Tumor suppressor gene Seq+ 6315 ChimerSeq FusionScan TCGA_RNA-Seq NRIP1-GDPD1 NRIP1 chr21 16437065 - GDPD1 chr17 57322774 + Exonic hg19 HNSC TCGA-BA-A8YP 2 5'UTR-CDS Inter-chr q21.1 q22 Seq+ 6316 ChimerSeq FusionScan TCGA_RNA-Seq SCAP-SMARCC1 SCAP chr3 47517288 - SMARCC1 chr3 47712207 - Exonic hg19 HNSC TCGA-CV-6962 6 5'UTR-CDS Intra-chr p21.31 p21.31 Tumor suppressor gene Seq+ 6317 ChimerSeq FusionScan TCGA_RNA-Seq AKAP8-SUGP2 AKAP8 chr19 15490523 - SUGP2 chr19 19112483 - Exonic hg19 HNSC TCGA-CV-6962 2 In-Frame Intra-chr p13.12 Transcription factor p13.11 6318 ChimerSeq FusionScan TCGA_RNA-Seq PITX1-P4HA2 PITX1 chr5 134369402 - P4HA2 chr5 131554337 - Exonic hg19 HNSC TCGA-DQ-7590 2 CDS-5'UTR Intra-chr q31.1 Transcription factor q31.1 Seq+ 6319 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD11-PAK2 ANKRD11 chr16 89484691 - PAK2 chr3 196509496 + Exonic hg19 HNSC TCGA-DQ-7590 2 5'UTR-5'UTR Inter-chr q24.3 q29 STE:STE20 6320 ChimerSeq FusionScan TCGA_RNA-Seq USP9X-BLVRB USP9X chrX 41078484 + BLVRB chr19 40964452 - Exonic hg19 HNSC TCGA-T2-A6WZ 2 In-Frame Inter-chr p11.4 Oncogene q13.2 Seq+ 6321 ChimerSeq FusionScan TCGA_RNA-Seq ERRFI1-UBE2J2 ERRFI1 chr1 8086217 - UBE2J2 chr1 1203372 - Exonic hg19 HNSC TCGA-UF-A718 2 5'UTR-5'UTR Intra-chr p36.23 Tumor suppressor gene p36.33 6322 ChimerSeq FusionScan TCGA_RNA-Seq GRHL2-CRMP1 GRHL2 chr8 102505017 + CRMP1 chr4 5830395 - Exonic hg19 HNSC TCGA-IQ-A61H 3 Out-of-Frame Inter-chr q22.3 Transcription factor p16.2 Seq+ 6323 ChimerSeq FusionScan TCGA_RNA-Seq KANK1-DOCK8 KANK1 chr9 504754 + DOCK8 chr9 441874 + Exonic hg19 HNSC TCGA-F7-A50J 4 5'UTR-CDS Intra-chr p24.3 Tumor suppressor gene p24.3 Seq+ 6324 ChimerSeq FusionScan TCGA_RNA-Seq TMBIM4-TMEM131 TMBIM4 chr12 66563634 - TMEM131 chr2 98430851 - Exonic hg19 HNSC TCGA-CR-6478 4 Out-of-Frame Inter-chr q14.3 q11.2 Seq+ 6325 ChimerSeq FusionScan TCGA_RNA-Seq GPI-EYS GPI chr19 34887335 + EYS chr6 65767620 - Exonic hg19 HNSC TCGA-CR-6478 4 In-Frame Inter-chr q12 Seq+ 6326 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD39-FAM178B ANKRD39 chr2 97523624 - FAM178B chr2 97568444 - Exonic hg19 HNSC TCGA-CR-6478 3 Out-of-Frame Intra-chr q11.2 q11.2 Seq+ 6327 ChimerSeq FusionScan TCGA_RNA-Seq KIF21A-TSPAN8 KIF21A chr12 39836728 - TSPAN8 chr12 71551567 - Exonic hg19 HNSC TCGA-CR-6478 3 CDS-5'UTR Intra-chr q12 q21.1 Seq+ 6328 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD39-FAM178B ANKRD39 chr2 97520074 - FAM178B chr2 97544230 - Exonic hg19 HNSC TCGA-CR-6478 2 In-Frame Intra-chr q11.2 q11.2 Seq+ 6329 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD39-FAM178B ANKRD39 chr2 97520074 - FAM178B chr2 97559788 - Exonic hg19 HNSC TCGA-CR-6478 2 In-Frame Intra-chr q11.2 q11.2 Seq+ 6330 ChimerSeq FusionScan TCGA_RNA-Seq FRMD6-BPIFB1 FRMD6 chr14 52037128 + BPIFB1 chr20 31873838 + Exonic hg19 HNSC TCGA-CQ-6227 3 5'UTR-5'UTR Inter-chr q22.1 q11.21 Seq+ 6331 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC19-ADK DNAJC19 chr3 180705810 - ADK chr10 76285013 + Exonic hg19 HNSC TCGA-CV-7103 5 In-Frame Inter-chr q26.33 q22.2 Seq+ 6332 ChimerSeq FusionScan TCGA_RNA-Seq ACTL6A-ALG3 ACTL6A chr3 179288029 + ALG3 chr3 183963600 - Exonic hg19 HNSC TCGA-CV-7103 4 In-Frame Intra-chr q26.33 q27.1 Seq+ 6333 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC19-ADK DNAJC19 chr3 180705810 - ADK chr10 76349039 + Exonic hg19 HNSC TCGA-CV-7103 3 In-Frame Inter-chr q26.33 q22.2 Seq+ 6334 ChimerSeq FusionScan TCGA_RNA-Seq PPHLN1-PTPRZ1 PPHLN1 chr12 42749024 + PTPRZ1 chr7 121699806 + Exonic hg19 HNSC TCGA-D6-6823 2 In-Frame Inter-chr q12 q31.32 6335 ChimerSeq FusionScan TCGA_RNA-Seq CLCN3-TCF4 CLCN3 chr4 170542214 + TCF4 chr18 52896307 - Exonic hg19 HNSC TCGA-CR-6473 2 5'UTR-CDS Inter-chr q33 q21.2 Tumor suppressor gene Transcription factor 6336 ChimerSeq FusionScan TCGA_RNA-Seq TLE3-THAP10 TLE3 chr15 70386870 - THAP10 chr15 71175247 - Exonic hg19 HNSC TCGA-CN-4738 2 In-Frame Intra-chr q23 q23 Transcription factor Seq+ 6337 ChimerSeq FusionScan TCGA_RNA-Seq FAM133B-STMN1 FAM133B chr7 92219581 - STMN1 chr1 26231229 - Exonic hg19 HNSC TCGA-UF-A7JV 2 5'UTR-5'UTR Inter-chr q21.2 p36.11 6338 ChimerSeq FusionScan TCGA_RNA-Seq YAP1-SHANK2 YAP1 chr11 102033302 + SHANK2 chr11 70349036 - Exonic hg19 HNSC TCGA-UF-A7JV 2 Out-of-Frame Intra-chr q22.1 Tumor suppressor gene q13.4 Seq+ 6339 ChimerSeq FusionScan TCGA_RNA-Seq FAT1-KIAA1430 FAT1 chr4 187554837 - KIAA1430 chr4 186085333 - Exonic hg19 HNSC TCGA-DQ-7588 13 In-Frame Intra-chr q35.2 Tumor suppressor gene Seq+ 6340 ChimerSeq FusionScan TCGA_RNA-Seq LDLR-HSH2D LDLR chr19 11200291 + HSH2D chr19 16263361 + Exonic hg19 HNSC TCGA-CV-7100 6 Out-of-Frame Intra-chr p13.2 p13.11 Seq+ 6341 ChimerSeq FusionScan TCGA_RNA-Seq ZC3H3-TOP1MT ZC3H3 chr8 144618426 - TOP1MT chr8 144413509 - Exonic hg19 HNSC TCGA-CV-7238 2 Out-of-Frame Intra-chr q24.3 Seq+ 6342 ChimerSeq FusionScan TCGA_RNA-Seq NLE1-FNDC8 NLE1 chr17 33466253 - FNDC8 chr17 33454060 + Exonic hg19 HNSC TCGA-DQ-7591 4 Out-of-Frame Intra-chr q12 q12 Seq+ 6343 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC8-C1orf172 DNAJC8 chr1 28559431 - C1orf172 chr1 27278903 - Exonic hg19 HNSC TCGA-DQ-7591 3 CDS-5'UTR Intra-chr p35.3 Seq+ 6344 ChimerSeq FusionScan TCGA_RNA-Seq WDTC1-TMEM39B WDTC1 chr1 27561442 + TMEM39B chr1 32540551 + Exonic hg19 HNSC TCGA-DQ-7591 2 5'UTR-CDS Intra-chr p36.11 p35.2 Seq+ 6345 ChimerSeq FusionScan TCGA_RNA-Seq RLF-SMAP2 RLF chr1 40661436 + SMAP2 chr1 40872407 + Exonic hg19 HNSC TCGA-DQ-7591 2 In-Frame Intra-chr p34.2 Transcription factor p34.2 6346 ChimerSeq FusionScan TCGA_RNA-Seq PARD6G-CHST1 PARD6G chr18 77960592 - CHST1 chr11 45674156 - Exonic hg19 HNSC TCGA-DQ-7591 2 CDS-5'UTR Inter-chr q23 p11.2 Seq+ 6347 ChimerSeq FusionScan TCGA_RNA-Seq KPNA6-RHCE KPNA6 chr1 32573735 + RHCE chr1 25697031 - Exonic hg19 HNSC TCGA-DQ-7591 2 In-Frame Intra-chr p35.2 p36.11 Seq+ 6348 ChimerSeq FusionScan TCGA_RNA-Seq IGF2R-PPAP2A IGF2R chr6 160448346 + PPAP2A chr5 54737736 - Exonic hg19 HNSC TCGA-DQ-7591 2 In-Frame Inter-chr q25.3 Oncogene Tumor suppressor gene 6349 ChimerSeq FusionScan TCGA_RNA-Seq ASMTL-P2RY8 ASMTL chrX 1553914 - P2RY8 chrY 1535475 - Exonic hg19 HNSC TCGA-BA-5559 4 5'UTR-5'UTR Inter-chr p22.33 p22.33 Seq+ 6350 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175388437 - Exonic hg19 HNSC TCGA-BB-4217 2 5'UTR-CDS Inter-chr q21.1 q35.2 6351 ChimerSeq FusionScan TCGA_RNA-Seq PBRM1-GLT8D1 PBRM1 chr3 52712515 - GLT8D1 chr3 52734512 - Exonic hg19 HNSC TCGA-QK-A6VC 3 CDS-5'UTR Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 Seq+ 6352 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0182-COX4NB KIAA0182 chr16 85647004 + COX4NB chr16 85822656 - Exonic hg19 HNSC TCGA-BA-A4II 3 Out-of-Frame Intra-chr Seq+ 6353 ChimerSeq FusionScan TCGA_RNA-Seq AKAP9-ANKIB1 AKAP9 chr7 91570461 + ANKIB1 chr7 91924202 + Exonic hg19 HNSC TCGA-BA-A4II 2 CDS-5'UTR Intra-chr q21.2 Oncogene q21.2 Seq+ 6354 ChimerSeq FusionScan TCGA_RNA-Seq COL16A1-CPSF6 COL16A1 chr1 32119199 - CPSF6 chr12 69663291 + Exonic hg19 HNSC TCGA-KU-A6H7 8 CDS-3'UTR Inter-chr p35.2 q15 Seq+ 6355 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-COL16A1 CPSF6 chr12 69656342 + COL16A1 chr1 32118454 - Exonic hg19 HNSC TCGA-KU-A6H7 8 3'UTR-CDS Inter-chr q15 p35.2 Seq+ 6356 ChimerSeq FusionScan TCGA_RNA-Seq COPS7B-PSMC6 COPS7B chr2 232653442 + PSMC6 chr14 53185694 + Exonic hg19 HNSC TCGA-KU-A6H7 2 Out-of-Frame Inter-chr q37.1 q22.1 6357 ChimerSeq FusionScan TCGA_RNA-Seq MYO9B-ABHD8 MYO9B chr19 17286550 + ABHD8 chr19 17405654 - Exonic hg19 HNSC TCGA-KU-A6H7 2 In-Frame Intra-chr p13.11 p13.11 6358 ChimerSeq FusionScan TCGA_RNA-Seq PROSC-C22orf43 PROSC chr8 37623873 + C22orf43 chr22 23959844 - Exonic hg19 HNSC TCGA-KU-A6H7 2 In-Frame Inter-chr 6359 ChimerSeq FusionScan TCGA_RNA-Seq SETX-EIF3B SETX chr9 135172273 - EIF3B chr7 2416584 + Exonic hg19 HNSC TCGA-UF-A71B 2 In-Frame Inter-chr q34.13 p22.3 6360 ChimerSeq FusionScan TCGA_RNA-Seq GLIPR2-ZCCHC7 GLIPR2 chr9 36136788 + ZCCHC7 chr9 37302184 + Exonic hg19 HNSC TCGA-CR-7372 3 In-Frame Intra-chr p13.3 p13.2 6361 ChimerSeq FusionScan TCGA_RNA-Seq IFI6-ATP1B3 IFI6 chr1 27994736 - ATP1B3 chr3 141644372 + Exonic hg19 HNSC TCGA-CR-7372 2 Out-of-Frame Inter-chr p35.3 q23 6362 ChimerSeq FusionScan TCGA_RNA-Seq NEDD4L-UBE2G1 NEDD4L chr18 55833093 + UBE2G1 chr17 4210418 - Exonic hg19 HNSC TCGA-CV-7435 3 Out-of-Frame Inter-chr q21.31 Tumor suppressor gene p13.2 Seq+ 6363 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0247-NDUFA12 KIAA0247 chr14 70078545 + NDUFA12 chr12 95388033 - Exonic hg19 HNSC TCGA-CV-7435 2 5'UTR-CDS Inter-chr q22 6364 ChimerSeq FusionScan TCGA_RNA-Seq MINK1-ALOX12 MINK1 chr17 4736935 + ALOX12 chr17 6903654 + Exonic hg19 HNSC TCGA-D6-A6EN 3 In-Frame Intra-chr p13.2 p13.1 Seq+ 6365 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57728677 + VMP1 chr17 57915655 + Exonic hg19 HNSC TCGA-CV-7434 9 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 6366 ChimerSeq FusionScan TCGA_RNA-Seq PQLC1-HSBP1L1 PQLC1 chr18 77703328 - HSBP1L1 chr18 77726611 + Exonic hg19 HNSC TCGA-CV-7434 4 Out-of-Frame Intra-chr q23 q23 Seq+ 6367 ChimerSeq FusionScan TCGA_RNA-Seq OPA1-ATP13A4 OPA1 chr3 193311198 + ATP13A4 chr3 193177020 - Exonic hg19 HNSC TCGA-CV-7434 4 In-Frame Intra-chr q29 q29 Seq+ 6368 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-PHF16 RPL22 chr1 6252989 - PHF16 chrX 46844284 + Exonic hg19 HNSC TCGA-CV-7434 2 CDS-5'UTR Inter-chr p36.31 6369 ChimerSeq FusionScan TCGA_RNA-Seq MSI2-UTP18 MSI2 chr17 55478832 + UTP18 chr17 49374325 + Exonic hg19 HNSC TCGA-BB-4227 4 Out-of-Frame Intra-chr q22 q21.33 Seq+ 6370 ChimerSeq FusionScan TCGA_RNA-Seq GLS-MYO1B GLS chr2 191789319 + MYO1B chr2 192141612 + Exonic hg19 HNSC TCGA-BB-4227 3 CDS-5'UTR Intra-chr q32.2 Tumor suppressor gene q32.3 Seq+ 6371 ChimerSeq FusionScan TCGA_RNA-Seq CTDSPL2-EIF3J CTDSPL2 chr15 44751398 + EIF3J chr15 44843073 + Exonic hg19 HNSC TCGA-BB-4227 2 In-Frame Intra-chr q15.3 q21.1 6372 ChimerSeq FusionScan TCGA_RNA-Seq DCAKD-EFTUD2 DCAKD chr17 43138255 - EFTUD2 chr17 42945265 - Exonic hg19 HNSC TCGA-BB-4227 2 5'UTR-CDS Intra-chr q21.31 q21.31 6373 ChimerSeq FusionScan TCGA_RNA-Seq RAP2A-ANAPC16 RAP2A chr13 98087038 + ANAPC16 chr10 73990123 + Exonic hg19 HNSC TCGA-BB-4227 2 Out-of-Frame Inter-chr q32.1 q22.1 6374 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175388437 - Exonic hg19 HNSC TCGA-CN-A63U 2 5'UTR-CDS Inter-chr q21.1 q35.2 6375 ChimerSeq FusionScan TCGA_RNA-Seq MRPL21-SHANK2 MRPL21 chr11 68660357 - SHANK2 chr11 70319544 - Exonic hg19 HNSC TCGA-F7-7848 5 Out-of-Frame Intra-chr q13.3 q13.4 Seq+ 6376 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB2-PCNXL3 RPS6KB2 chr11 67196711 + PCNXL3 chr11 65385410 + Exonic hg19 HNSC TCGA-F7-7848 2 Out-of-Frame Intra-chr q13.2 Seq+ 6377 ChimerSeq FusionScan TCGA_RNA-Seq DGCR2-ANO1 DGCR2 chr22 19109640 - ANO1 chr11 69949171 + Exonic hg19 HNSC TCGA-CR-7399 5 Out-of-Frame Inter-chr q11.21 q13.3 Seq+ 6378 ChimerSeq FusionScan TCGA_RNA-Seq AK3-RCL1 AK3 chr9 4740936 - RCL1 chr9 4823547 + Exonic hg19 HNSC TCGA-CR-7399 5 In-Frame Intra-chr p24.1 p24.1 Seq+ 6379 ChimerSeq FusionScan TCGA_RNA-Seq PPFIA1-RNF167 PPFIA1 chr11 70176425 + RNF167 chr17 4845871 + Exonic hg19 HNSC TCGA-CR-7399 2 In-Frame Inter-chr q13.3 p13.2 6380 ChimerSeq FusionScan TCGA_RNA-Seq MIRLET7BHG-SCUBE1 MIRLET7BHG chr22 46499129 + SCUBE1 chr22 43735241 - Exonic hg19 HNSC TCGA-CN-6020 2 5'UTR-CDS Intra-chr q13.31 q13.2 Seq+ 6381 ChimerSeq FusionScan TCGA_RNA-Seq RPS27A-MIR4426 RPS27A chr2 55462098 + MIR4426 chr2 55461299 + Exonic hg19 HNSC TCGA-CV-7429 2 CDS-5'UTR Intra-chr p16.1 q31.2 6382 ChimerSeq FusionScan TCGA_RNA-Seq ENPEP-SLC9B2 ENPEP chr4 111409838 + SLC9B2 chr4 103947748 - Exonic hg19 HNSC TCGA-CV-7429 2 In-Frame Intra-chr q25 q24 6383 ChimerSeq FusionScan TCGA_RNA-Seq C12orf10-NFX1 C12orf10 chr12 53700104 + NFX1 chr9 33366626 + Exonic hg19 HNSC TCGA-CV-6956 2 In-Frame Inter-chr q13.13 p13.3 Transcription factor 6384 ChimerSeq FusionScan TCGA_RNA-Seq ITM2B-RB1 ITM2B chr13 48828072 + RB1 chr13 48916734 + Exonic hg19 HNSC TCGA-HD-7832 10 In-Frame Intra-chr q14.2 q14.2 Oncogene Tumor suppressor gene Seq+ 6385 ChimerSeq FusionScan TCGA_RNA-Seq TMBIM4-TMEM131 TMBIM4 chr12 66563634 - TMEM131 chr2 98430851 - Exonic hg19 HNSC TCGA-CR-6478 4 Out-of-Frame Inter-chr q14.3 q11.2 Seq+ 6386 ChimerSeq FusionScan TCGA_RNA-Seq GPI-EYS GPI chr19 34887335 + EYS chr6 65767620 - Exonic hg19 HNSC TCGA-CR-6478 4 In-Frame Inter-chr q12 Seq+ 6387 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD39-FAM178B ANKRD39 chr2 97523624 - FAM178B chr2 97568444 - Exonic hg19 HNSC TCGA-CR-6478 3 Out-of-Frame Intra-chr q11.2 q11.2 Seq+ 6388 ChimerSeq FusionScan TCGA_RNA-Seq KIF21A-TSPAN8 KIF21A chr12 39836728 - TSPAN8 chr12 71551567 - Exonic hg19 HNSC TCGA-CR-6478 3 CDS-5'UTR Intra-chr q12 q21.1 Seq+ 6389 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD39-FAM178B ANKRD39 chr2 97520074 - FAM178B chr2 97544230 - Exonic hg19 HNSC TCGA-CR-6478 2 In-Frame Intra-chr q11.2 q11.2 Seq+ 6390 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD39-FAM178B ANKRD39 chr2 97520074 - FAM178B chr2 97559788 - Exonic hg19 HNSC TCGA-CR-6478 2 In-Frame Intra-chr q11.2 q11.2 Seq+ 6391 ChimerSeq FusionScan TCGA_RNA-Seq MTDH-MATN2 MTDH chr8 98657115 + MATN2 chr8 98973635 + Exonic hg19 HNSC TCGA-CR-6467 3 Out-of-Frame Intra-chr q22.1 q22.1 Seq+ 6392 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-EZH2 CPSF6 chr12 69656342 + EZH2 chr7 148512638 - Exonic hg19 HNSC TCGA-CR-6467 2 3'UTR-CDS Inter-chr q15 q36.1 Oncogene Tumor suppressor gene 6393 ChimerSeq FusionScan TCGA_RNA-Seq TRIP12-PID1 TRIP12 chr2 230744697 - PID1 chr2 230020680 - Exonic hg19 HNSC TCGA-CR-6467 2 Out-of-Frame Intra-chr q36.3 q36.3 Seq+ 6394 ChimerSeq FusionScan TCGA_RNA-Seq RPS20-POMT2 RPS20 chr8 56986618 - POMT2 chr14 77750216 - Exonic hg19 HNSC TCGA-CR-6467 2 In-Frame Inter-chr q12.1 q24.3 6395 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57752204 + VMP1 chr17 57915655 + Exonic hg19 HNSC TCGA-CN-A63V 5 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 6396 ChimerSeq FusionScan TCGA_RNA-Seq FKBP1A-CDS2 FKBP1A chr20 1373477 - CDS2 chr20 5169712 + Exonic hg19 HNSC TCGA-CV-6937 3 Out-of-Frame Intra-chr p13 p12.3 Seq+ 6397 ChimerSeq FusionScan TCGA_RNA-Seq TCEB1-LRSAM1 TCEB1 chr8 74868145 - LRSAM1 chr9 130263288 + Exonic hg19 HNSC TCGA-QK-A6II 2 In-Frame Inter-chr q33.3 6398 ChimerSeq FusionScan TCGA_RNA-Seq A2ML1-RBM39 A2ML1 chr12 8988262 + RBM39 chr20 34301018 - Exonic hg19 HNSC TCGA-QK-A6II 2 In-Frame Inter-chr p13.31 q11.22 6399 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA7-PRKCG NDUFA7 chr19 8381379 - PRKCG chr19 54406326 + Exonic hg19 HNSC TCGA-D6-6515 2 Out-of-Frame Intra-chr p13.2 q13.42 Seq+ 6400 ChimerSeq FusionScan TCGA_RNA-Seq MINK1-ALOX12 MINK1 chr17 4736935 + ALOX12 chr17 6903654 + Exonic hg19 HNSC TCGA-D6-A6EN 3 In-Frame Intra-chr p13.2 p13.1 Seq+ 6401 ChimerSeq FusionScan TCGA_RNA-Seq ZNF780A-CAPN12 ZNF780A chr19 40596072 - CAPN12 chr19 39233168 - Exonic hg19 HNSC TCGA-CR-6488 2 5'UTR-CDS Intra-chr Transcription factor q13.2 6402 ChimerSeq FusionScan TCGA_RNA-Seq CREBBP-ATG10 CREBBP chr16 3900297 - ATG10 chr5 81354313 + Exonic hg19 HNSC TCGA-CR-7374 2 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene q14.1 Seq+ 6403 ChimerSeq FusionScan TCGA_RNA-Seq TXLNG-KIFAP3 TXLNG chrX 16838378 + KIFAP3 chr1 169930376 - Exonic hg19 HNSC TCGA-CV-A45R 2 In-Frame Inter-chr p22.2 q24.2 6404 ChimerSeq FusionScan TCGA_RNA-Seq NOTCH1-SEC16A NOTCH1 chr9 139438475 - SEC16A chr9 139372136 - Exonic hg19 HNSC TCGA-CV-6441 4 CDS-5'UTR Intra-chr q34.3 Oncogene Tumor suppressor gene q34.3 6405 ChimerSeq FusionScan TCGA_RNA-Seq ASMTL-P2RY8 ASMTL chrX 1553914 - P2RY8 chrY 1535475 - Exonic hg19 HNSC TCGA-BA-5559 4 5'UTR-5'UTR Inter-chr p22.33 p22.33 Seq+ 6406 ChimerSeq FusionScan TCGA_RNA-Seq RBM17-PRKACB RBM17 chr10 6148201 + PRKACB chr1 84644859 + Exonic hg19 HNSC TCGA-MT-A67F 4 In-Frame Inter-chr p15.1 p31.1 Seq+ 6407 ChimerSeq FusionScan TCGA_RNA-Seq CTCF-GFOD2 CTCF chr16 67663436 + GFOD2 chr16 67719705 - Exonic hg19 HNSC TCGA-P3-A6T7 2 CDS-5'UTR Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 Seq+ 6408 ChimerSeq FusionScan TCGA_RNA-Seq COL16A1-CPSF6 COL16A1 chr1 32119199 - CPSF6 chr12 69663291 + Exonic hg19 HNSC TCGA-KU-A6H7 8 CDS-3'UTR Inter-chr p35.2 q15 Seq+ 6409 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-COL16A1 CPSF6 chr12 69656342 + COL16A1 chr1 32118454 - Exonic hg19 HNSC TCGA-KU-A6H7 8 3'UTR-CDS Inter-chr q15 p35.2 Seq+ 6410 ChimerSeq FusionScan TCGA_RNA-Seq PROSC-C22orf43 PROSC chr8 37623873 + C22orf43 chr22 23959844 - Exonic hg19 HNSC TCGA-KU-A6H7 2 In-Frame Inter-chr 6411 ChimerSeq FusionScan TCGA_RNA-Seq PTRH2-VMP1 PTRH2 chr17 57784731 - VMP1 chr17 57886156 + Exonic hg19 HNSC TCGA-CX-7086 6 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 6412 ChimerSeq FusionScan TCGA_RNA-Seq VMP1-PTRH2 VMP1 chr17 57785109 + PTRH2 chr17 57775339 - Exonic hg19 HNSC TCGA-CX-7086 3 5'UTR-5'UTR Intra-chr q23.1 q23.1 Seq+ 6413 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D10A-POLR3H TBC1D10A chr22 30695432 - POLR3H chr22 41936799 - Exonic hg19 HNSC TCGA-CX-7086 3 In-Frame Intra-chr q12.2 q13.2 Seq+ 6414 ChimerSeq FusionScan TCGA_RNA-Seq DHX40-VMP1 DHX40 chr17 57683035 + VMP1 chr17 57895072 + Exonic hg19 HNSC TCGA-CR-6493 3 Out-of-Frame Intra-chr q23.1 q23.1 Seq+ 6415 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57733388 + VMP1 chr17 57915655 + Exonic hg19 HNSC TCGA-CV-7425 3 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 6416 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB40-PSMB7 ZBTB40 chr1 22778497 + PSMB7 chr9 127146935 - Exonic hg19 HNSC TCGA-CV-A45Z 2 5'UTR-CDS Inter-chr p36.12 Transcription factor q33.3 6417 ChimerSeq FusionScan TCGA_RNA-Seq SCAF1-FLT3LG SCAF1 chr19 50156962 + FLT3LG chr19 49982165 + Exonic hg19 HNSC TCGA-CN-4731 3 Out-of-Frame Intra-chr q13.33 q13.33 Seq+ 6418 ChimerSeq FusionScan TCGA_RNA-Seq ANKFY1-MRPL9 ANKFY1 chr17 4145550 - MRPL9 chr1 151733375 - Exonic hg19 HNSC TCGA-CN-4731 2 Out-of-Frame Inter-chr p13.2 q21.3 6419 ChimerSeq FusionScan TCGA_RNA-Seq PPP3CC-PIWIL2 PPP3CC chr8 22333137 + PIWIL2 chr8 22138632 + Exonic hg19 HNSC TCGA-CN-4731 2 In-Frame Intra-chr p21.3 Tumor suppressor gene p21.3 Tumor suppressor gene Seq+ 6420 ChimerSeq FusionScan TCGA_RNA-Seq LIMK1-GGA1 LIMK1 chr7 73500174 + GGA1 chr22 38014454 + Exonic hg19 HNSC TCGA-CN-6019 2 Out-of-Frame Inter-chr q11.23 TKL:LISK q13.1 6421 ChimerSeq FusionScan TCGA_RNA-Seq YTHDF1-C11orf24 YTHDF1 chr20 61845215 - C11orf24 chr11 68035719 - Exonic hg19 HNSC TCGA-CN-5360 2 CDS-5'UTR Inter-chr q13.33 q13.2 6422 ChimerSeq FusionScan TCGA_RNA-Seq PIP5K1C-MATK PIP5K1C chr19 3700294 - MATK chr19 3781670 - Exonic hg19 HNSC TCGA-CN-4741 3 In-Frame Intra-chr p13.3 p13.3 Seq+ 6423 ChimerSeq FusionScan TCGA_RNA-Seq BICD2-IPPK BICD2 chr9 95477534 - IPPK chr9 95420963 - Exonic hg19 HNSC TCGA-CN-4741 2 In-Frame Intra-chr q22.31 q22.31 6424 ChimerSeq FusionScan TCGA_RNA-Seq PIP5K1C-MATK PIP5K1C chr19 3700294 - MATK chr19 3779795 - Exonic hg19 HNSC TCGA-CN-4741 2 In-Frame Intra-chr p13.3 p13.3 Seq+ 6425 ChimerSeq FusionScan TCGA_RNA-Seq PHACTR2-PLAGL1 PHACTR2 chr6 143999346 + PLAGL1 chr6 144290115 - Exonic hg19 HNSC TCGA-BA-4076 2 CDS-5'UTR Intra-chr q24.2 q24.2 Tumor suppressor gene Transcription factor Seq+ 6426 ChimerSeq FusionScan TCGA_RNA-Seq SULF2-PHF20 SULF2 chr20 46331262 - PHF20 chr20 34515701 + Exonic hg19 HNSC TCGA-CV-7178 2 In-Frame Intra-chr q13.12 q11.22 Transcription factor 6427 ChimerSeq FusionScan TCGA_RNA-Seq DSC3-MBD3 DSC3 chr18 28622557 - MBD3 chr19 1585213 - Exonic hg19 HNSC TCGA-CV-7178 2 Out-of-Frame Inter-chr q12.1 Tumor suppressor gene p13.3 Transcription factor 6428 ChimerSeq FusionScan TCGA_RNA-Seq VPS41-AES VPS41 chr7 38829400 - AES chr19 3054192 - Exonic hg19 HNSC TCGA-CV-7421 3 Out-of-Frame Inter-chr p14.1 p13.3 Seq+ 6429 ChimerSeq FusionScan TCGA_RNA-Seq EWSR1-ABR EWSR1 chr22 29669853 + ABR chr17 1028702 - Exonic hg19 HNSC TCGA-CV-7421 3 In-Frame Inter-chr q12.2 p13.3 Seq+ 6430 ChimerSeq FusionScan TCGA_RNA-Seq FOXN3-ZC3H14 FOXN3 chr14 90085371 - ZC3H14 chr14 89073586 + Exonic hg19 HNSC TCGA-CV-A6JM 2 5'UTR-CDS Intra-chr q32.11 Transcription factor q31.3 6431 ChimerSeq FusionScan TCGA_RNA-Seq CNFN-RIN3 CNFN chr19 42894391 - RIN3 chr14 93142819 + Exonic hg19 HNSC TCGA-CV-A6JM 2 5'UTR-CDS Inter-chr q13.2 q32.12 6432 ChimerSeq FusionScan TCGA_RNA-Seq PIP5K1C-MATK PIP5K1C chr19 3700294 - MATK chr19 3781670 - Exonic hg19 HNSC TCGA-CN-4741 3 In-Frame Intra-chr p13.3 p13.3 Seq+ 6433 ChimerSeq FusionScan TCGA_RNA-Seq BICD2-IPPK BICD2 chr9 95477534 - IPPK chr9 95420963 - Exonic hg19 HNSC TCGA-CN-4741 2 In-Frame Intra-chr q22.31 q22.31 6434 ChimerSeq FusionScan TCGA_RNA-Seq PIP5K1C-MATK PIP5K1C chr19 3700294 - MATK chr19 3779795 - Exonic hg19 HNSC TCGA-CN-4741 2 In-Frame Intra-chr p13.3 p13.3 Seq+ 6435 ChimerSeq FusionScan TCGA_RNA-Seq DNM1-LCN2 DNM1 chr9 130965910 + LCN2 chr9 130913916 + Exonic hg19 HNSC TCGA-CN-4723 4 In-Frame Intra-chr q34.11 q34.11 Seq+ 6436 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0319L-DLGAP3 KIAA0319L chr1 36019950 - DLGAP3 chr1 35334690 - Exonic hg19 HNSC TCGA-CN-4723 2 Out-of-Frame Intra-chr p34.3 p34.3 Seq+ 6437 ChimerSeq FusionScan TCGA_RNA-Seq NFYC-KCNQ4 NFYC chr1 41232375 + KCNQ4 chr1 41282936 + Exonic hg19 HNSC TCGA-CN-4723 2 Out-of-Frame Intra-chr p34.2 Transcription factor p34.2 6438 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-SRSF7 RCC1 chr1 28834672 + SRSF7 chr2 38973889 - Exonic hg19 HNSC TCGA-CV-6950 2 5'UTR-CDS Inter-chr p35.3 p22.1 6439 ChimerSeq FusionScan TCGA_RNA-Seq FUT10-RNF122 FUT10 chr8 33330581 - RNF122 chr8 33416289 - Exonic hg19 HNSC TCGA-F7-A623 3 5'UTR-CDS Intra-chr p12 p12 Seq+ 6440 ChimerSeq FusionScan TCGA_RNA-Seq IST1-ATXN1L IST1 chr16 71929492 + ATXN1L chr16 71917019 + Exonic hg19 HNSC TCGA-F7-A623 3 5'UTR-5'UTR Intra-chr q22.2 q22.2 6441 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57697534 + VMP1 chr17 57915655 + Exonic hg19 HNSC TCGA-F7-A623 3 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 6442 ChimerSeq FusionScan TCGA_RNA-Seq SMAP1-C6orf147 SMAP1 chr6 71508440 + C6orf147 chr6 74001763 - Exonic hg19 HNSC TCGA-F7-A623 2 CDS-3'UTR Intra-chr q13 6443 ChimerSeq FusionScan TCGA_RNA-Seq DNM1-LCN2 DNM1 chr9 130965910 + LCN2 chr9 130913916 + Exonic hg19 HNSC TCGA-CN-4723 4 In-Frame Intra-chr q34.11 q34.11 Seq+ 6444 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0319L-DLGAP3 KIAA0319L chr1 36019950 - DLGAP3 chr1 35334690 - Exonic hg19 HNSC TCGA-CN-4723 2 Out-of-Frame Intra-chr p34.3 p34.3 Seq+ 6445 ChimerSeq FusionScan TCGA_RNA-Seq NFYC-KCNQ4 NFYC chr1 41232375 + KCNQ4 chr1 41282936 + Exonic hg19 HNSC TCGA-CN-4723 2 Out-of-Frame Intra-chr p34.2 Transcription factor p34.2 6446 ChimerSeq FusionScan TCGA_RNA-Seq ROCK1-DCC ROCK1 chr18 18586311 - DCC chr18 50912412 + Exonic hg19 HNSC TCGA-CV-5434 2 In-Frame Intra-chr q11.1 AGC:DMPK q21.2 Oncogene Tumor suppressor gene Seq+ 6447 ChimerSeq FusionScan TCGA_RNA-Seq NXN-WRAP53 NXN chr17 882558 - WRAP53 chr17 7604058 + Exonic hg19 HNSC TCGA-CQ-7065 4 In-Frame Intra-chr p13.3 p13.1 Seq+ 6448 ChimerSeq FusionScan TCGA_RNA-Seq KIAA2026-PLGRKT KIAA2026 chr9 6007194 - PLGRKT chr9 5361187 - Exonic hg19 HNSC TCGA-CV-A45X 6 In-Frame Intra-chr p24.1 p24.1 Seq+ 6449 ChimerSeq FusionScan TCGA_RNA-Seq PTEN-HSPBAP1 PTEN chr10 89653866 + HSPBAP1 chr3 122459960 - Exonic hg19 HNSC TCGA-CV-7446 2 Out-of-Frame Inter-chr q23.31 Oncogene Tumor suppressor gene q21.1 6450 ChimerSeq FusionScan TCGA_RNA-Seq CRHR1-KANSL1 CRHR1 chr17 43699407 + KANSL1 chr17 44172067 - Exonic hg19 HNSC TCGA-CV-7446 2 5'UTR-CDS Intra-chr q21.31 Pub 6451 ChimerSeq FusionScan TCGA_RNA-Seq IPPK-VTI1B IPPK chr9 95418737 - VTI1B chr14 68118198 - Exonic hg19 HNSC TCGA-CV-7446 2 Out-of-Frame Inter-chr q22.31 q24.1 Seq+ 6452 ChimerSeq FusionScan TCGA_RNA-Seq IGF2BP3-PKNOX2 IGF2BP3 chr7 23508100 - PKNOX2 chr11 125104940 + Exonic hg19 HNSC TCGA-CV-7446 2 CDS-5'UTR Inter-chr p15.3 q24.2 Transcription factor 6453 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHA1-PAPD7 PLEKHA1 chr10 124177484 + PAPD7 chr5 6737622 + Exonic hg19 HNSC TCGA-CV-7446 2 CDS-5'UTR Inter-chr q26.13 p15.31 6454 ChimerSeq FusionScan TCGA_RNA-Seq TPX2-RALY TPX2 chr20 30366787 + RALY chr20 32659871 + Exonic hg19 HNSC TCGA-CV-6959 4 CDS-5'UTR Intra-chr q11.21 q11.22 Seq+ 6455 ChimerSeq FusionScan TCGA_RNA-Seq AK3-IL33 AK3 chr9 4740936 - IL33 chr9 6241683 + Exonic hg19 HNSC TCGA-C9-A47Z 9 CDS-5'UTR Intra-chr p24.1 p24.1 Seq+ 6456 ChimerSeq FusionScan TCGA_RNA-Seq WDR36-GPNMB WDR36 chr5 110440516 + GPNMB chr7 23292925 + Exonic hg19 HNSC TCGA-C9-A47Z 2 In-Frame Inter-chr q22.1 p15.3 6457 ChimerSeq FusionScan TCGA_RNA-Seq SEPW1-EHD2 SEPW1 chr19 48282071 + EHD2 chr19 48244137 + Exonic hg19 HNSC TCGA-BA-6872 4 Out-of-Frame Intra-chr q13.33 Seq+ 6458 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-ARAF RCC1 chr1 28834672 + ARAF chrX 47426037 + Exonic hg19 HNSC TCGA-BA-6872 2 5'UTR-CDS Inter-chr p35.3 p11.3 TKL:RAF Oncogene 6459 ChimerSeq FusionScan TCGA_RNA-Seq RBM17-PRKACB RBM17 chr10 6148201 + PRKACB chr1 84644859 + Exonic hg19 HNSC TCGA-MT-A67F 4 In-Frame Inter-chr p15.1 p31.1 Seq+ 6460 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175388437 - Exonic hg19 HNSC TCGA-CV-5441 2 5'UTR-CDS Inter-chr q21.1 q35.2 6461 ChimerSeq FusionScan TCGA_RNA-Seq PHF21A-GLIS2 PHF21A chr11 45967390 - GLIS2 chr16 4386725 + Exonic hg19 HNSC TCGA-CN-6994 2 Out-of-Frame Inter-chr p11.2 Transcription factor p13.3 Transcription factor Seq+ 6462 ChimerSeq FusionScan TCGA_RNA-Seq CLCN3-TCF4 CLCN3 chr4 170542214 + TCF4 chr18 52896307 - Exonic hg19 HNSC TCGA-CR-6473 2 5'UTR-CDS Inter-chr q33 q21.2 Tumor suppressor gene Transcription factor 6463 ChimerSeq FusionScan TCGA_RNA-Seq YWHAQ-ITGB1BP1 YWHAQ chr2 9771069 - ITGB1BP1 chr2 9548334 - Exonic hg19 HNSC TCGA-MZ-A7D7 2 5'UTR-CDS Intra-chr p25.1 p25.1 Seq+ 6464 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57756880 + VMP1 chr17 57895072 + Exonic hg19 HNSC TCGA-CV-A463 2 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 6465 ChimerSeq FusionScan TCGA_RNA-Seq GPD2-NR4A2 GPD2 chr2 157332719 + NR4A2 chr2 157182840 - Exonic hg19 HNSC TCGA-HD-A634 2 Out-of-Frame Intra-chr q24.1 q24.1 Transcription factor Seq+ 6466 ChimerSeq FusionScan TCGA_RNA-Seq NR4A2-GPD2 NR4A2 chr2 157187179 - GPD2 chr2 157332609 + Exonic hg19 HNSC TCGA-HD-A634 2 5'UTR-5'UTR Intra-chr q24.1 Transcription factor q24.1 Seq+ 6467 ChimerSeq FusionScan TCGA_RNA-Seq ERRFI1-UBE2J2 ERRFI1 chr1 8086217 - UBE2J2 chr1 1203372 - Exonic hg19 HNSC TCGA-UF-A718 2 5'UTR-5'UTR Intra-chr p36.23 Tumor suppressor gene p36.33 6468 ChimerSeq FusionScan TCGA_RNA-Seq FOXN3-ZC3H14 FOXN3 chr14 90085371 - ZC3H14 chr14 89073586 + Exonic hg19 HNSC TCGA-CV-A6JM 2 5'UTR-CDS Intra-chr q32.11 Transcription factor q31.3 6469 ChimerSeq FusionScan TCGA_RNA-Seq CNFN-RIN3 CNFN chr19 42894391 - RIN3 chr14 93142819 + Exonic hg19 HNSC TCGA-CV-A6JM 2 5'UTR-CDS Inter-chr q13.2 q32.12 6470 ChimerSeq FusionScan TCGA_RNA-Seq FAM60A-TEAD4 FAM60A chr12 31478957 - TEAD4 chr12 3147133 + Exonic hg19 HNSC TCGA-BA-5558 2 5'UTR-CDS Intra-chr p13.33 Transcription factor 6471 ChimerSeq FusionScan TCGA_RNA-Seq TP53TG1-ABCB1 TP53TG1 chr7 86970838 - ABCB1 chr7 87183248 - Exonic hg19 HNSC TCGA-BB-7872 2 3'UTR-CDS Intra-chr q21.12 q21.12 Seq+ 6472 ChimerSeq FusionScan TCGA_RNA-Seq USP25-C5orf42 USP25 chr21 17135287 + C5orf42 chr5 37125511 - Exonic hg19 HNSC TCGA-BB-7872 2 Out-of-Frame Inter-chr q21.1 p13.2 6473 ChimerSeq FusionScan TCGA_RNA-Seq DEGS1-PCID2 DEGS1 chr1 224371120 + PCID2 chr13 113839874 - Exonic hg19 HNSC TCGA-BB-7872 2 Out-of-Frame Inter-chr q42.11 q34 6474 ChimerSeq FusionScan TCGA_RNA-Seq CAPN2-HHIPL2 CAPN2 chr1 223905533 + HHIPL2 chr1 222705453 - Exonic hg19 HNSC TCGA-BB-7872 2 Out-of-Frame Intra-chr q41 q41 6475 ChimerSeq FusionScan TCGA_RNA-Seq YIPF1-YTHDF2 YIPF1 chr1 54343987 - YTHDF2 chr1 29095440 + Exonic hg19 HNSC TCGA-CQ-6228 6 Out-of-Frame Intra-chr p32.3 p35.3 Seq+ 6476 ChimerSeq FusionScan TCGA_RNA-Seq YIPF1-YTHDF2 YIPF1 chr1 54344314 - YTHDF2 chr1 29095440 + Exonic hg19 HNSC TCGA-CQ-6228 2 In-Frame Intra-chr p32.3 p35.3 Seq+ 6477 ChimerSeq FusionScan TCGA_RNA-Seq GALK2-C15orf43 GALK2 chr15 49584734 + C15orf43 chr15 45270686 + Exonic hg19 HNSC TCGA-CQ-6228 2 In-Frame Intra-chr q21.1 Seq+ 6478 ChimerSeq FusionScan TCGA_RNA-Seq PANX1-KIAA1377 PANX1 chr11 93886796 + KIAA1377 chr11 101814995 + Exonic hg19 HNSC TCGA-CQ-6228 2 Out-of-Frame Intra-chr q21 Seq+ 6479 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-SNHG15 RCC1 chr1 28834672 + SNHG15 chr7 45024025 - Exonic hg19 HNSC TCGA-CV-A6K1 2 5'UTR-3'UTR Inter-chr p35.3 p13 6480 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175388437 - Exonic hg19 HNSC TCGA-CV-7440 2 5'UTR-CDS Inter-chr q21.1 q35.2 6481 ChimerSeq FusionScan TCGA_RNA-Seq TFB2M-SMYD3 TFB2M chr1 246727647 - SMYD3 chr1 246498776 - Exonic hg19 HNSC TCGA-CR-6474 3 In-Frame Intra-chr q44 q44 Transcription factor Seq+ 6482 ChimerSeq FusionScan TCGA_RNA-Seq URGCP-CHD2 URGCP chr7 43965730 - CHD2 chr15 93540186 + Exonic hg19 HNSC TCGA-CR-6474 2 5'UTR-CDS Inter-chr p13 q26.1 6483 ChimerSeq FusionScan TCGA_RNA-Seq TRIO-PPP2R5E TRIO chr5 14280545 + PPP2R5E chr14 63848875 - Exonic hg19 HNSC TCGA-BA-5153 2 In-Frame Inter-chr p15.2 q23.2 Seq+ 6484 ChimerSeq FusionScan TCGA_RNA-Seq MRPL21-SHANK2 MRPL21 chr11 68660357 - SHANK2 chr11 70319544 - Exonic hg19 HNSC TCGA-F7-7848 5 Out-of-Frame Intra-chr q13.3 q13.4 Seq+ 6485 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB2-PCNXL3 RPS6KB2 chr11 67196711 + PCNXL3 chr11 65385410 + Exonic hg19 HNSC TCGA-F7-7848 2 Out-of-Frame Intra-chr q13.2 Seq+ 6486 ChimerSeq FusionScan TCGA_RNA-Seq SNHG6-PPP1R42 SNHG6 chr8 67837671 - PPP1R42 chr8 67923066 - Exonic hg19 HNSC TCGA-UF-A7JD 3 3'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 6487 ChimerSeq FusionScan TCGA_RNA-Seq EIF4B-C19orf71 EIF4B chr12 53400280 + C19orf71 chr19 3543232 + Exonic hg19 HNSC TCGA-BA-5152 2 Out-of-Frame Inter-chr q13.13 p13.3 6488 ChimerSeq FusionScan TCGA_RNA-Seq VMP1-TUBD1 VMP1 chr17 57895134 + TUBD1 chr17 57955695 - Exonic hg19 HNSC TCGA-BA-A6DJ 2 Out-of-Frame Intra-chr q23.1 q23.1 Seq+ 6489 ChimerSeq FusionScan TCGA_RNA-Seq SIK3-MRPS9 SIK3 chr11 116968858 - MRPS9 chr2 105687770 + Exonic hg19 HNSC TCGA-D6-A6EM 2 In-Frame Inter-chr q23.3 q12.1 6490 ChimerSeq FusionScan TCGA_RNA-Seq RPS27A-MIR4426 RPS27A chr2 55462098 + MIR4426 chr2 55461299 + Exonic hg19 HNSC TCGA-CV-7429 2 CDS-5'UTR Intra-chr p16.1 q31.2 6491 ChimerSeq FusionScan TCGA_RNA-Seq ENPEP-SLC9B2 ENPEP chr4 111409838 + SLC9B2 chr4 103947748 - Exonic hg19 HNSC TCGA-CV-7429 2 In-Frame Intra-chr q25 q24 6492 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1L1-TCEA1 WHSC1L1 chr8 38162104 - TCEA1 chr8 54883023 - Exonic hg19 HNSC TCGA-KU-A66T 8 Out-of-Frame Intra-chr p11.23 Tumor suppressor gene q11.23 Seq+ 6493 ChimerSeq FusionScan TCGA_RNA-Seq KDM5C-HUWE1 KDM5C chrX 53245255 - HUWE1 chrX 53707139 - Exonic hg19 HNSC TCGA-KU-A66T 6 CDS-5'UTR Intra-chr p11.22 Oncogene p11.22 Seq+ 6494 ChimerSeq FusionScan TCGA_RNA-Seq MYO1B-NCKAP1 MYO1B chr2 192110352 + NCKAP1 chr2 183829536 - Exonic hg19 HNSC TCGA-KU-A66T 2 5'UTR-CDS Intra-chr q32.3 q32.1 Seq+ 6495 ChimerSeq FusionScan TCGA_RNA-Seq SMARCA2-DMRT1 SMARCA2 chr9 2088613 + DMRT1 chr9 916762 + Exonic hg19 HNSC TCGA-CV-7415 2 In-Frame Intra-chr p24.3 Tumor suppressor gene p24.3 Transcription factor Seq+ 6496 ChimerSeq FusionScan TCGA_RNA-Seq PHLDB2-CD96 PHLDB2 chr3 111564782 + CD96 chr3 111366389 + Exonic hg19 HNSC TCGA-BA-5555 3 In-Frame Intra-chr q13.2 q13.13 Seq+ 6497 ChimerSeq FusionScan TCGA_RNA-Seq EBPL-LPAR6 EBPL chr13 50265389 - LPAR6 chr13 48989946 - Exonic hg19 HNSC TCGA-BA-5555 3 CDS-5'UTR Intra-chr q14.2 q14.2 Seq+ 6498 ChimerSeq FusionScan TCGA_RNA-Seq GTF2H2D-NAIP GTF2H2D chr5 68878256 + NAIP chr5 70266295 - Exonic hg19 HNSC TCGA-BA-5555 2 Out-of-Frame Intra-chr q13.2 6499 ChimerSeq FusionScan TCGA_RNA-Seq NEDD4L-CDH19 NEDD4L chr18 55833093 + CDH19 chr18 64239553 - Exonic hg19 HNSC TCGA-CN-5359 3 5'UTR-5'UTR Intra-chr q21.31 Tumor suppressor gene q22.1 Seq+ 6500 ChimerSeq FusionScan TCGA_RNA-Seq DGCR2-ANO1 DGCR2 chr22 19109640 - ANO1 chr11 69949171 + Exonic hg19 HNSC TCGA-CR-7399 5 Out-of-Frame Inter-chr q11.21 q13.3 Seq+ 6501 ChimerSeq FusionScan TCGA_RNA-Seq AK3-RCL1 AK3 chr9 4740936 - RCL1 chr9 4823547 + Exonic hg19 HNSC TCGA-CR-7399 5 In-Frame Intra-chr p24.1 p24.1 Seq+ 6502 ChimerSeq FusionScan TCGA_RNA-Seq PPFIA1-RNF167 PPFIA1 chr11 70176425 + RNF167 chr17 4845871 + Exonic hg19 HNSC TCGA-CR-7399 2 In-Frame Inter-chr q13.3 p13.2 6503 ChimerSeq FusionScan TCGA_RNA-Seq RNF216-MTHFD1L RNF216 chr7 5764954 - MTHFD1L chr6 151330954 + Exonic hg19 HNSC TCGA-CV-7236 3 In-Frame Inter-chr p22.1 q25.1 Seq+ 6504 ChimerSeq FusionScan TCGA_RNA-Seq ADD1-ADK ADD1 chr4 2845751 + ADK chr10 76153898 + Exonic hg19 HNSC TCGA-CV-5978 3 5'UTR-CDS Inter-chr p16.3 q22.2 Seq+ 6505 ChimerSeq FusionScan TCGA_RNA-Seq SLBP-LETM1 SLBP chr4 1696500 - LETM1 chr4 1827410 - Exonic hg19 HNSC TCGA-CR-7370 4 In-Frame Intra-chr p16.3 p16.3 Seq+ 6506 ChimerSeq FusionScan TCGA_RNA-Seq PLA2R1-ITGB6 PLA2R1 chr2 160832578 - ITGB6 chr2 160998582 - Exonic hg19 HNSC TCGA-CR-7370 2 In-Frame Intra-chr q24.2 Tumor suppressor gene q24.2 Seq+ 6507 ChimerSeq FusionScan TCGA_RNA-Seq FKBP1A-CDS2 FKBP1A chr20 1373477 - CDS2 chr20 5169712 + Exonic hg19 HNSC TCGA-CV-6937 3 Out-of-Frame Intra-chr p13 p12.3 Seq+ 6508 ChimerSeq FusionScan TCGA_RNA-Seq KANK1-DOCK8 KANK1 chr9 504754 + DOCK8 chr9 441874 + Exonic hg19 HNSC TCGA-F7-A50J 4 5'UTR-CDS Intra-chr p24.3 Tumor suppressor gene p24.3 Seq+ 6509 ChimerSeq FusionScan TCGA_RNA-Seq BRI3-FIS1 BRI3 chr7 97911765 + FIS1 chr7 100884187 - Exonic hg19 HNSC TCGA-CV-7254 2 Out-of-Frame Intra-chr q21.3 q22.1 6510 ChimerSeq FusionScan TCGA_RNA-Seq KEAP1-RAD23A KEAP1 chr19 10610070 - RAD23A chr19 13063502 + Exonic hg19 HNSC TCGA-CV-7254 2 In-Frame Intra-chr p13.2 Oncogene p13.13 6511 ChimerSeq FusionScan TCGA_RNA-Seq AGAP1-UBE2F AGAP1 chr2 236403493 + UBE2F chr2 238881733 + Exonic hg19 HNSC TCGA-CR-6484 3 CDS-5'UTR Intra-chr q37.2 q37.3 Seq+ 6512 ChimerSeq FusionScan TCGA_RNA-Seq ITCH-DEFB118 ITCH chr20 33059320 + DEFB118 chr20 29960659 + Exonic hg19 HNSC TCGA-CV-5443 3 Out-of-Frame Intra-chr q11.22 q11.21 Seq+ 6513 ChimerSeq FusionScan TCGA_RNA-Seq HMGXB3-CAPN1 HMGXB3 chr5 149380742 + CAPN1 chr11 64972153 + Exonic hg19 HNSC TCGA-CN-5355 2 5'UTR-5'UTR Inter-chr q32 q13.1 Seq+ 6514 ChimerSeq FusionScan TCGA_RNA-Seq TCF12-PYGO1 TCF12 chr15 57356021 + PYGO1 chr15 55841193 - Exonic hg19 HNSC TCGA-CN-5355 2 Out-of-Frame Intra-chr q21.3 Oncogene Transcription factor q21.3 6515 ChimerSeq FusionScan TCGA_RNA-Seq RNF126-PRSS57 RNF126 chr19 649678 - PRSS57 chr19 687188 - Exonic hg19 HNSC TCGA-CN-A6V6 11 In-Frame Intra-chr p13.3 p13.3 Seq+ 6516 ChimerSeq FusionScan TCGA_RNA-Seq RBM34-SNX3 RBM34 chr1 235311718 - SNX3 chr6 108544249 - Exonic hg19 HNSC TCGA-CN-A6V6 2 Out-of-Frame Inter-chr q42.3 q21 6517 ChimerSeq FusionScan TCGA_RNA-Seq INTS4L2-KSR1 INTS4L2 chr7 65112960 + KSR1 chr17 25877593 + Exonic hg19 HNSC TCGA-CN-A6V6 2 5'UTR-5'UTR Inter-chr q11.2 TKL:RAF 6518 ChimerSeq FusionScan TCGA_RNA-Seq TLN1-PLEKHM1 TLN1 chr9 35732071 - PLEKHM1 chr17 43531638 - Exonic hg19 HNSC TCGA-IQ-7632 2 5'UTR-5'UTR Inter-chr p13.3 6519 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57728677 + VMP1 chr17 57915655 + Exonic hg19 HNSC TCGA-CV-7434 9 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 6520 ChimerSeq FusionScan TCGA_RNA-Seq PQLC1-HSBP1L1 PQLC1 chr18 77703328 - HSBP1L1 chr18 77726611 + Exonic hg19 HNSC TCGA-CV-7434 4 Out-of-Frame Intra-chr q23 q23 Seq+ 6521 ChimerSeq FusionScan TCGA_RNA-Seq OPA1-ATP13A4 OPA1 chr3 193311198 + ATP13A4 chr3 193177020 - Exonic hg19 HNSC TCGA-CV-7434 4 In-Frame Intra-chr q29 q29 Seq+ 6522 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-PHF16 RPL22 chr1 6252989 - PHF16 chrX 46844284 + Exonic hg19 HNSC TCGA-CV-7434 2 CDS-5'UTR Inter-chr p36.31 6523 ChimerSeq FusionScan TCGA_RNA-Seq RABEP1-RNF167 RABEP1 chr17 5235447 + RNF167 chr17 4843781 + Exonic hg19 HNSC TCGA-UF-A71A 2 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 6524 ChimerSeq FusionScan TCGA_RNA-Seq MYO1B-STAT4 MYO1B chr2 192110352 + STAT4 chr2 192012930 - Exonic hg19 HNSC TCGA-BA-4075 10 5'UTR-5'UTR Intra-chr q32.3 q32.3 Transcription factor Seq+ 6525 ChimerSeq FusionScan TCGA_RNA-Seq TTC13-FAM89A TTC13 chr1 231114305 - FAM89A chr1 231155872 - Exonic hg19 HNSC TCGA-BA-4075 2 Out-of-Frame Intra-chr q42.2 q42.2 6526 ChimerSeq FusionScan TCGA_RNA-Seq GLIPR2-ZCCHC7 GLIPR2 chr9 36136788 + ZCCHC7 chr9 37302184 + Exonic hg19 HNSC TCGA-CR-7372 3 In-Frame Intra-chr p13.3 p13.2 6527 ChimerSeq FusionScan TCGA_RNA-Seq IFI6-ATP1B3 IFI6 chr1 27994736 - ATP1B3 chr3 141644372 + Exonic hg19 HNSC TCGA-CR-7372 2 Out-of-Frame Inter-chr p35.3 q23 6528 ChimerSeq FusionScan TCGA_RNA-Seq NXN-WRAP53 NXN chr17 882558 - WRAP53 chr17 7604058 + Exonic hg19 HNSC TCGA-CQ-7065 3 In-Frame Intra-chr p13.3 p13.1 Seq+ 6529 ChimerSeq FusionScan TCGA_RNA-Seq VMP1-RPS6KB1 VMP1 chr17 57915758 + RPS6KB1 chr17 57987922 + Exonic hg19 HNSC TCGA-CQ-5327 2 In-Frame Intra-chr q23.1 q23.1 Oncogene Seq+ 6530 ChimerSeq FusionScan TCGA_RNA-Seq TYMS-C18orf56 TYMS chr18 659714 + C18orf56 chr18 649964 - Exonic hg19 HNSC TCGA-CV-6935 4 3'UTR-3'UTR Intra-chr p11.32 6531 ChimerSeq FusionScan TCGA_RNA-Seq SLC2A12-SGK1 SLC2A12 chr6 134373515 - SGK1 chr6 134583286 - Exonic hg19 HNSC TCGA-BA-4078 3 Out-of-Frame Intra-chr q23.2 q23.2 AGC:SGK Oncogene Seq+ 6532 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-PTEN RCC1 chr1 28832596 + PTEN chr10 89725043 + Exonic hg19 HNSC TCGA-BA-4078 2 5'UTR-CDS Inter-chr p35.3 q23.31 Oncogene Tumor suppressor gene 6533 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 HNSC TCGA-BA-4078 2 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 6534 ChimerSeq FusionScan TCGA_RNA-Seq SPHK2-TMEM106B SPHK2 chr19 49123810 + TMEM106B chr7 12263851 + Exonic hg19 HNSC TCGA-BA-4078 2 Out-of-Frame Inter-chr q13.33 p21.3 6535 ChimerSeq FusionScan TCGA_RNA-Seq TBL1X-GPR143 TBL1X chrX 9469889 + GPR143 chrX 9711713 - Exonic hg19 HNSC TCGA-HL-7533 4 5'UTR-CDS Intra-chr p22.31 p22.2 Seq+ 6536 ChimerSeq FusionScan TCGA_RNA-Seq NF1-RNF135 NF1 chr17 29497015 + RNF135 chr17 29324259 + Exonic hg19 HNSC TCGA-HL-7533 2 Out-of-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 6537 ChimerSeq FusionScan TCGA_RNA-Seq CPT1A-SHANK2 CPT1A chr11 68609242 - SHANK2 chr11 70653276 - Exonic hg19 HNSC TCGA-CQ-5323 3 5'UTR-CDS Intra-chr q13.3 q13.4 Seq+ 6538 ChimerSeq FusionScan TCGA_RNA-Seq NFIX-RALGPS1 NFIX chr19 13136366 + RALGPS1 chr9 129928347 + Exonic hg19 HNSC TCGA-CV-7428 3 In-Frame Inter-chr p13.13 Transcription factor q33.3 Seq+ 6539 ChimerSeq FusionScan TCGA_RNA-Seq FLJ31306-PSMA3 FLJ31306 chr14 58758352 - PSMA3 chr14 58737135 + Exonic hg19 HNSC TCGA-CV-7428 2 3'UTR-CDS Intra-chr q23.1 Seq+ 6540 ChimerSeq FusionScan TCGA_RNA-Seq TCEB1-LRSAM1 TCEB1 chr8 74868145 - LRSAM1 chr9 130263288 + Exonic hg19 HNSC TCGA-QK-A6II 2 In-Frame Inter-chr q33.3 6541 ChimerSeq FusionScan TCGA_RNA-Seq A2ML1-RBM39 A2ML1 chr12 8988262 + RBM39 chr20 34301018 - Exonic hg19 HNSC TCGA-QK-A6II 2 In-Frame Inter-chr p13.31 q11.22 6542 ChimerSeq FusionScan TCGA_RNA-Seq TMEM181-HP1BP3 TMEM181 chr6 159029782 + HP1BP3 chr1 21100103 - Exonic hg19 HNSC TCGA-BB-4228 2 In-Frame Inter-chr q25.3 p36.12 6543 ChimerSeq FusionScan TCGA_RNA-Seq HIRA-BCL2L13 HIRA chr22 19418962 - BCL2L13 chr22 18209442 + Exonic hg19 HNSC TCGA-CV-7255 6 Out-of-Frame Intra-chr q11.21 Tumor suppressor gene q11.21 Seq+ 6544 ChimerSeq FusionScan TCGA_RNA-Seq VMP1-TUBD1 VMP1 chr17 57895134 + TUBD1 chr17 57955695 - Exonic hg19 HNSC TCGA-BA-A6DJ 2 Out-of-Frame Intra-chr q23.1 q23.1 Seq+ 6545 ChimerSeq FusionScan TCGA_RNA-Seq SH3GL1-STAP2 SH3GL1 chr19 4400320 - STAP2 chr19 4334041 - Exonic hg19 HNSC TCGA-CR-7371 3 In-Frame Intra-chr p13.3 p13.3 Seq+ 6546 ChimerSeq FusionScan TCGA_RNA-Seq CCT2-CTSL2 CCT2 chr12 69980124 + CTSL2 chr9 99795330 - Exonic hg19 HNSC TCGA-CQ-A4C6 2 Out-of-Frame Inter-chr q15 6547 ChimerSeq FusionScan TCGA_RNA-Seq CEP135-DCAF13 CEP135 chr4 56830568 + DCAF13 chr8 104433202 + Exonic hg19 HNSC TCGA-CQ-A4C6 2 In-Frame Inter-chr q12 q22.3 6548 ChimerSeq FusionScan TCGA_RNA-Seq TFRC-MINA TFRC chr3 195800800 - MINA chr3 97678023 - Exonic hg19 HNSC TCGA-CV-6942 2 Out-of-Frame Intra-chr q29 6549 ChimerSeq FusionScan TCGA_RNA-Seq MBP-ZNF516 MBP chr18 74817166 - ZNF516 chr18 74092259 - Exonic hg19 HNSC TCGA-CV-6942 2 Out-of-Frame Intra-chr q23 q23 Transcription factor 6550 ChimerSeq FusionScan TCGA_RNA-Seq SYNE2-ITPK1 SYNE2 chr14 64486811 + ITPK1 chr14 93460342 - Exonic hg19 HNSC TCGA-CQ-6229 2 In-Frame Intra-chr q23.2 Seq+ 6551 ChimerSeq FusionScan TCGA_RNA-Seq CUL5-ATM CUL5 chr11 107969256 + ATM chr11 108235808 + Exonic hg19 HNSC TCGA-CV-6952 2 In-Frame Intra-chr q22.3 Tumor suppressor gene q22.3 Atypical:PIKK Oncogene Tumor suppressor gene Seq+ 6552 ChimerSeq FusionScan TCGA_RNA-Seq VMP1-RPS6KB1 VMP1 chr17 57915758 + RPS6KB1 chr17 57987922 + Exonic hg19 HNSC TCGA-CV-6952 2 In-Frame Intra-chr q23.1 q23.1 Oncogene Seq+ 6553 ChimerSeq FusionScan TCGA_RNA-Seq TLN1-PLEKHM1 TLN1 chr9 35732071 - PLEKHM1 chr17 43531638 - Exonic hg19 HNSC TCGA-IQ-7632 2 5'UTR-5'UTR Inter-chr p13.3 6554 ChimerSeq FusionScan TCGA_RNA-Seq DTX2-ZP3 DTX2 chr7 76093026 + ZP3 chr7 76054368 + Exonic hg19 HNSC TCGA-BB-A5HY 6 5'UTR-5'UTR Intra-chr q11.23 Seq+ 6555 ChimerSeq FusionScan TCGA_RNA-Seq BDP1-PMCH BDP1 chr5 70779723 + PMCH chr12 102590479 - Exonic hg19 HNSC TCGA-BB-A5HY 2 In-Frame Inter-chr q23.2 6556 ChimerSeq FusionScan TCGA_RNA-Seq DTX2-ZP3 DTX2 chr7 76091153 + ZP3 chr7 76054368 + Exonic hg19 HNSC TCGA-BB-A5HY 2 5'UTR-5'UTR Intra-chr q11.23 Seq+ 6557 ChimerSeq FusionScan TCGA_RNA-Seq SIN3A-SNUPN SIN3A chr15 75743763 - SNUPN chr15 75913397 - Exonic hg19 HNSC TCGA-BB-A5HY 2 5'UTR-5'UTR Intra-chr q24.2 q24.2 Seq+ 6558 ChimerSeq FusionScan TCGA_RNA-Seq GOLIM4-SLC40A1 GOLIM4 chr3 167742313 - SLC40A1 chr2 190440046 - Exonic hg19 HNSC TCGA-CV-7261 3 In-Frame Inter-chr q26.2 q32.2 Seq+ 6559 ChimerSeq FusionScan TCGA_RNA-Seq ZHX2-DERL1 ZHX2 chr8 123794185 + DERL1 chr8 124037290 - Exonic hg19 HNSC TCGA-CV-7261 2 5'UTR-CDS Intra-chr q24.13 Tumor suppressor gene Transcription factor q24.13 6560 ChimerSeq FusionScan TCGA_RNA-Seq RNF213-CSNK1D RNF213 chr17 78354787 + CSNK1D chr17 80211120 - Exonic hg19 HNSC TCGA-CV-7414 2 In-Frame Intra-chr q25.3 Oncogene q25.3 6561 ChimerSeq FusionScan TCGA_RNA-Seq NCEH1-CCDC50 NCEH1 chr3 172428636 - CCDC50 chr3 191087707 + Exonic hg19 HNSC TCGA-CV-7414 2 In-Frame Intra-chr q26.31 q28 6562 ChimerSeq FusionScan TCGA_RNA-Seq CLCC1-PABPC1 CLCC1 chr1 109505982 - PABPC1 chr8 101717901 - Exonic hg19 HNSC TCGA-BA-A4IG 2 5'UTR-CDS Inter-chr p13.3 q22.3 6563 ChimerSeq FusionScan TCGA_RNA-Seq PTEN-HSPBAP1 PTEN chr10 89653866 + HSPBAP1 chr3 122459960 - Exonic hg19 HNSC TCGA-CV-7446 2 Out-of-Frame Inter-chr q23.31 Oncogene Tumor suppressor gene q21.1 6564 ChimerSeq FusionScan TCGA_RNA-Seq CRHR1-KANSL1 CRHR1 chr17 43699407 + KANSL1 chr17 44172067 - Exonic hg19 HNSC TCGA-CV-7446 2 5'UTR-CDS Intra-chr q21.31 Pub 6565 ChimerSeq FusionScan TCGA_RNA-Seq IGF2BP3-PKNOX2 IGF2BP3 chr7 23508100 - PKNOX2 chr11 125104940 + Exonic hg19 HNSC TCGA-CV-7446 2 CDS-5'UTR Inter-chr p15.3 q24.2 Transcription factor 6566 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHA1-PAPD7 PLEKHA1 chr10 124177484 + PAPD7 chr5 6737622 + Exonic hg19 HNSC TCGA-CV-7446 2 CDS-5'UTR Inter-chr q26.13 p15.31 6567 ChimerSeq FusionScan TCGA_RNA-Seq IPPK-VTI1B IPPK chr9 95418737 - VTI1B chr14 68118198 - Exonic hg19 HNSC TCGA-CV-7446 2 Out-of-Frame Inter-chr q22.31 q24.1 Seq+ 6568 ChimerSeq FusionScan TCGA_RNA-Seq FAM195B-P4HB FAM195B chr17 79782162 - P4HB chr17 79805223 - Exonic hg19 HNSC TCGA-CN-4729 3 Out-of-Frame Intra-chr q25.3 Seq+ 6569 ChimerSeq FusionScan TCGA_RNA-Seq MBTD1-SPG7 MBTD1 chr17 49336503 - SPG7 chr16 89590413 + Exonic hg19 HNSC TCGA-CN-4729 2 5'UTR-CDS Inter-chr q21.33 q24.3 6570 ChimerSeq FusionScan TCGA_RNA-Seq NUAK2-LEMD1 NUAK2 chr1 205280832 - LEMD1 chr1 205389702 - Exonic hg19 HNSC TCGA-BA-6871 8 CDS-5'UTR Intra-chr q32.1 q32.1 Seq+ 6571 ChimerSeq FusionScan TCGA_RNA-Seq NR4A1-IL20RB NR4A1 chr12 52435713 + IL20RB chr3 136699307 + Exonic hg19 HNSC TCGA-BA-6871 3 In-Frame Inter-chr q13.13 Tumor suppressor gene Transcription factor q22.3 Seq+ 6572 ChimerSeq FusionScan TCGA_RNA-Seq BAIAP2-TBCD BAIAP2 chr17 79060380 + TBCD chr17 80847543 + Exonic hg19 HNSC TCGA-BA-6871 2 In-Frame Intra-chr q25.3 Seq+ 6573 ChimerSeq FusionScan TCGA_RNA-Seq MATR3-SIL1 MATR3 chr5 138629494 + SIL1 chr5 138463542 - Exonic hg19 HNSC TCGA-BA-6871 2 5'UTR-5'UTR Intra-chr q31.2 q31.2 6574 ChimerSeq FusionScan TCGA_RNA-Seq SLTM-ATL2 SLTM chr15 59193458 - ATL2 chr2 38523255 - Exonic hg19 HNSC TCGA-BA-6871 2 Out-of-Frame Inter-chr q22.1 p22.1 6575 ChimerSeq FusionScan TCGA_RNA-Seq KIF24-AKT3 KIF24 chr9 34310721 - AKT3 chr1 244006584 - Exonic hg19 HNSC TCGA-BA-6871 2 CDS-5'UTR Inter-chr p13.3 AGC:Akt Oncogene 6576 ChimerSeq FusionScan TCGA_RNA-Seq NIPAL3-GRHL3 NIPAL3 chr1 24779994 + GRHL3 chr1 24690674 + Exonic hg19 HNSC TCGA-HD-8314 2 Out-of-Frame Intra-chr p36.11 p36.11 Transcription factor Seq+ 6577 ChimerSeq FusionScan TCGA_RNA-Seq HEBP1-NCK1 HEBP1 chr12 13140085 - NCK1 chr3 136667100 + Exonic hg19 HNSC TCGA-QK-A8ZB 3 Out-of-Frame Inter-chr p13.1 q22.3 Seq+ 6578 ChimerSeq FusionScan TCGA_RNA-Seq PDIA6-DKK3 PDIA6 chr2 10952803 - DKK3 chr11 11990034 - Exonic hg19 HNSC TCGA-QK-A8ZB 3 Out-of-Frame Inter-chr p25.1 p15.3 Tumor suppressor gene Seq+ 6579 ChimerSeq FusionScan TCGA_RNA-Seq BRWD3-FAM155A BRWD3 chrX 80047352 - FAM155A chr13 107823134 - Exonic hg19 HNSC TCGA-QK-A8ZB 2 In-Frame Inter-chr q21.1 q33.3 Seq+ 6580 ChimerSeq FusionScan TCGA_RNA-Seq NCK1-HEBP1 NCK1 chr3 136665137 + HEBP1 chr12 13128413 - Exonic hg19 HNSC TCGA-QK-A8ZB 2 Out-of-Frame Inter-chr q22.3 p13.1 Seq+ 6581 ChimerSeq FusionScan TCGA_RNA-Seq FOXN2-PLB1 FOXN2 chr2 48541953 + PLB1 chr2 28863792 + Exonic hg19 HNSC TCGA-BA-7269 9 5'UTR-CDS Intra-chr p16.3 Transcription factor p23.2 Seq+ 6582 ChimerSeq FusionScan TCGA_RNA-Seq FOXN2-PLB1 FOXN2 chr2 48541953 + PLB1 chr2 28865723 + Exonic hg19 HNSC TCGA-BA-7269 2 5'UTR-CDS Intra-chr p16.3 Transcription factor p23.2 Seq+ 6583 ChimerSeq FusionScan TCGA_RNA-Seq PHF21A-GLIS2 PHF21A chr11 45967390 - GLIS2 chr16 4386725 + Exonic hg19 HNSC TCGA-CN-6994 2 Out-of-Frame Inter-chr p11.2 Transcription factor p13.3 Transcription factor Seq+ 6584 ChimerSeq FusionScan TCGA_RNA-Seq STAG1-SPSB4 STAG1 chr3 136117590 - SPSB4 chr3 140865983 + Exonic hg19 HNSC TCGA-UF-A7JA 2 Out-of-Frame Intra-chr q22.3 q23 Seq+ 6585 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-TTF2 RCC1 chr1 28832596 + TTF2 chr1 117631422 + Exonic hg19 HNSC TCGA-CQ-6221 2 5'UTR-CDS Intra-chr p35.3 p13.1 6586 ChimerSeq FusionScan TCGA_RNA-Seq FAM172A-FLJ42709 FAM172A chr5 93111864 - FLJ42709 chr5 92774447 - Exonic hg19 HNSC TCGA-CV-7407 4 3'UTR-3'UTR Intra-chr q15 Tumor suppressor gene Seq+ 6587 ChimerSeq FusionScan TCGA_RNA-Seq TSHZ3-IL29 TSHZ3 chr19 31840085 - IL29 chr19 39787444 + Exonic hg19 HNSC TCGA-CV-7407 3 Out-of-Frame Intra-chr q12 Transcription factor Seq+ 6588 ChimerSeq FusionScan TCGA_RNA-Seq WDR36-NREP WDR36 chr5 110428316 + NREP chr5 111071204 - Exonic hg19 HNSC TCGA-BA-4077 2 In-Frame Intra-chr q22.1 q22.1 Seq+ 6589 ChimerSeq FusionScan TCGA_RNA-Seq NCKAP1-PARD3 NCKAP1 chr2 183888533 - PARD3 chr10 34985347 - Exonic hg19 HNSC TCGA-CN-4742 4 In-Frame Inter-chr q32.1 p11.21 Seq+ 6590 ChimerSeq FusionScan TCGA_RNA-Seq NF1-CCDC47 NF1 chr17 29580018 + CCDC47 chr17 61824321 - Exonic hg19 HNSC TCGA-CQ-7069 2 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q23.3 6591 ChimerSeq FusionScan TCGA_RNA-Seq SULF2-YLPM1 SULF2 chr20 46305237 - YLPM1 chr14 75301967 + Exonic hg19 HNSC TCGA-CR-7382 2 In-Frame Inter-chr q13.12 q24.3 6592 ChimerSeq FusionScan TCGA_RNA-Seq IFI35-BRCA1 IFI35 chr17 41164294 + BRCA1 chr17 41209152 - Exonic hg19 HNSC TCGA-CR-7382 2 In-Frame Intra-chr q21.31 q21.31 Oncogene Tumor suppressor gene 6593 ChimerSeq FusionScan TCGA_RNA-Seq RNF126-PRSS57 RNF126 chr19 649678 - PRSS57 chr19 687188 - Exonic hg19 HNSC TCGA-CN-A6V6 11 In-Frame Intra-chr p13.3 p13.3 Seq+ 6594 ChimerSeq FusionScan TCGA_RNA-Seq RBM34-SNX3 RBM34 chr1 235311718 - SNX3 chr6 108544249 - Exonic hg19 HNSC TCGA-CN-A6V6 2 Out-of-Frame Inter-chr q42.3 q21 6595 ChimerSeq FusionScan TCGA_RNA-Seq INTS4L2-KSR1 INTS4L2 chr7 65112960 + KSR1 chr17 25877593 + Exonic hg19 HNSC TCGA-CN-A6V6 2 5'UTR-5'UTR Inter-chr q11.2 TKL:RAF 6596 ChimerSeq FusionScan TCGA_RNA-Seq CSNK2A1-SEPT9 CSNK2A1 chr20 524315 - SEPT9 chr17 75478225 + Exonic hg19 HNSC TCGA-QK-A8Z9 2 5'UTR-5'UTR Inter-chr p13 Oncogene 6597 ChimerSeq FusionScan TCGA_RNA-Seq PSD3-ANO1 PSD3 chr8 18725183 - ANO1 chr11 69933857 + Exonic hg19 HNSC TCGA-CN-4735 3 Out-of-Frame Inter-chr p22 q13.3 Seq+ 6598 ChimerSeq FusionScan TCGA_RNA-Seq HIVEP3-ANO6 HIVEP3 chr1 42384083 - ANO6 chr12 45725077 + Exonic hg19 HNSC TCGA-CN-4735 2 5'UTR-CDS Inter-chr p34.2 Tumor suppressor gene Transcription factor q12 6599 ChimerSeq FusionScan TCGA_RNA-Seq NDUFS1-BRCA1 NDUFS1 chr2 207018341 - BRCA1 chr17 41209152 - Exonic hg19 HNSC TCGA-CN-4735 2 Out-of-Frame Inter-chr q21.31 Oncogene Tumor suppressor gene 6600 ChimerSeq FusionScan TCGA_RNA-Seq CDC5L-SH3TC1 CDC5L chr6 44376369 + SH3TC1 chr4 8233702 + Exonic hg19 HNSC TCGA-CN-4735 2 5'UTR-CDS Inter-chr p21.1 Transcription factor p16.1 6601 ChimerSeq FusionScan TCGA_RNA-Seq TMEM131-OLA1 TMEM131 chr2 98611938 - OLA1 chr2 175006728 - Exonic hg19 HNSC TCGA-CN-4735 2 In-Frame Intra-chr q11.2 q31.1 6602 ChimerSeq FusionScan TCGA_RNA-Seq ADC-ISOC1 ADC chr1 33563780 + ISOC1 chr5 128440648 + Exonic hg19 HNSC TCGA-CN-4735 2 In-Frame Inter-chr q23.3 6603 ChimerSeq FusionScan TCGA_RNA-Seq FAT1-ACSL1 FAT1 chr4 187627716 - ACSL1 chr4 185724700 - Exonic hg19 HNSC TCGA-CN-4722 12 CDS-5'UTR Intra-chr q35.2 Tumor suppressor gene q35.1 Seq+ 6604 ChimerSeq FusionScan TCGA_RNA-Seq NF1-CCDC47 NF1 chr17 29580018 + CCDC47 chr17 61824321 - Exonic hg19 HNSC TCGA-CQ-7069 2 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q23.3 6605 ChimerSeq FusionScan TCGA_RNA-Seq COBLL1-SLC38A11 COBLL1 chr2 165697665 - SLC38A11 chr2 165796066 - Exonic hg19 HNSC TCGA-QK-A6VB 2 Out-of-Frame Intra-chr q24.3 q24.3 Seq+ 6606 ChimerSeq FusionScan TCGA_RNA-Seq OR51B5-HBG1 OR51B5 chr11 5367002 - HBG1 chr11 5270820 - Exonic hg19 HNSC TCGA-CQ-6225 2 5'UTR-CDS Intra-chr p15.4 p15.4 Seq+ 6607 ChimerSeq FusionScan TCGA_RNA-Seq POLR2D-ASAP2 POLR2D chr2 128615601 - ASAP2 chr2 9496175 + Exonic hg19 HNSC TCGA-CQ-6225 2 In-Frame Intra-chr q14.3 p25.1 6608 ChimerSeq FusionScan TCGA_RNA-Seq VGLL4-CHL1 VGLL4 chr3 11643306 - CHL1 chr3 407632 + Exonic hg19 HNSC TCGA-D6-6826 2 Out-of-Frame Intra-chr p25.2 p26.3 Seq+ 6609 ChimerSeq FusionScan TCGA_RNA-Seq ASMTL-P2RY8 ASMTL chrX 1553914 - P2RY8 chrY 1535475 - Exonic hg19 HNSC TCGA-D6-6826 2 5'UTR-5'UTR Inter-chr p22.33 p22.33 Seq+ 6610 ChimerSeq FusionScan TCGA_RNA-Seq DENND1A-NDUFA8 DENND1A chr9 126371714 - NDUFA8 chr9 124914687 - Exonic hg19 HNSC TCGA-H7-A76A 2 In-Frame Intra-chr q33.3 q33.2 Seq+ 6611 ChimerSeq FusionScan TCGA_RNA-Seq FBXL20-UNC45B FBXL20 chr17 37557613 - UNC45B chr17 33498340 + Exonic hg19 HNSC TCGA-CV-5431 2 In-Frame Intra-chr q12 q12 Seq+ 6612 ChimerSeq FusionScan TCGA_RNA-Seq VCL-SEC24C VCL chr10 75802911 + SEC24C chr10 75526517 + Exonic hg19 HNSC TCGA-CR-7402 2 In-Frame Intra-chr q22.2 q22.2 Seq+ 6613 ChimerSeq FusionScan TCGA_RNA-Seq EIF2S1-ATP6V1D EIF2S1 chr14 67827173 + ATP6V1D chr14 67817407 - Exonic hg19 HNSC TCGA-CN-A49A 5 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 6614 ChimerSeq FusionScan TCGA_RNA-Seq TATDN1-MTSS1 TATDN1 chr8 125551265 - MTSS1 chr8 125580777 - Exonic hg19 HNSC TCGA-CV-7410 2 In-Frame Intra-chr q24.13 q24.13 Tumor suppressor gene 6615 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57733388 + VMP1 chr17 57915655 + Exonic hg19 HNSC TCGA-CV-7425 3 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 6616 ChimerSeq FusionScan TCGA_RNA-Seq EPC1-QPCT EPC1 chr10 32594699 - QPCT chr2 37586722 + Exonic hg19 HNSC TCGA-UF-A71E 3 Out-of-Frame Inter-chr p11.22 p22.2 Seq+ 6617 ChimerSeq FusionScan TCGA_RNA-Seq MRPL21-IGHMBP2 MRPL21 chr11 68671190 - IGHMBP2 chr11 68682290 + Exonic hg19 HNSC TCGA-UF-A71E 2 Out-of-Frame Intra-chr q13.3 q13.3 Seq+ 6618 ChimerSeq FusionScan TCGA_RNA-Seq GCNT1-HMOX2 GCNT1 chr9 79075093 + HMOX2 chr16 4555484 + Exonic hg19 HNSC TCGA-CN-4730 2 5'UTR-5'UTR Inter-chr q21.13 p13.3 6619 ChimerSeq FusionScan TCGA_RNA-Seq TIAM1-PCBP3 TIAM1 chr21 32711557 - PCBP3 chr21 47316121 + Exonic hg19 HNSC TCGA-CR-7367 3 5'UTR-CDS Intra-chr q22.11 q22.3 Seq+ 6620 ChimerSeq FusionScan TCGA_RNA-Seq TFB2M-SMYD3 TFB2M chr1 246711846 - SMYD3 chr1 246093239 - Exonic hg19 HNSC TCGA-CR-7367 2 In-Frame Intra-chr q44 q44 Transcription factor Seq+ 6621 ChimerSeq FusionScan TCGA_RNA-Seq MPP5-EIF2S1 MPP5 chr14 67708250 + EIF2S1 chr14 67831483 + Exonic hg19 HNSC TCGA-CR-7367 2 5'UTR-5'UTR Intra-chr q23.3 q23.3 6622 ChimerSeq FusionScan TCGA_RNA-Seq SF1-HRASLS2 SF1 chr11 64534371 - HRASLS2 chr11 63326132 - Exonic hg19 HNSC TCGA-BB-8596 5 In-Frame Intra-chr q13.1 q12.3 Tumor suppressor gene Seq+ 6623 ChimerSeq FusionScan TCGA_RNA-Seq CPT1A-SHANK2 CPT1A chr11 68609242 - SHANK2 chr11 70653276 - Exonic hg19 HNSC TCGA-CQ-5323 3 5'UTR-CDS Intra-chr q13.3 q13.4 Seq+ 6624 ChimerSeq FusionScan TCGA_RNA-Seq RIOK3-TAF4B RIOK3 chr18 21033466 + TAF4B chr18 23969808 + Exonic hg19 HNSC TCGA-CV-7101 4 In-Frame Intra-chr q11.2 Atypical:RIO q11.2 Seq+ 6625 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-KIAA1456 TBL1XR1 chr3 176914908 - KIAA1456 chr8 12863710 + Exonic hg19 HNSC TCGA-CV-7101 2 5'UTR-5'UTR Inter-chr q26.32 p22 Seq+ 6626 ChimerSeq FusionScan TCGA_RNA-Seq KPNA6-EIF3I KPNA6 chr1 32573735 + EIF3I chr1 32694099 + Exonic hg19 HNSC TCGA-CR-7379 3 Out-of-Frame Intra-chr p35.2 p35.2 Seq+ 6627 ChimerSeq FusionScan TCGA_RNA-Seq TTN-ZNF385B TTN chr2 179527692 - ZNF385B chr2 180311497 - Exonic hg19 HNSC TCGA-HD-8224 2 In-Frame Intra-chr q31.2 CAMK:MLCK q31.3 Transcription factor 6628 ChimerSeq FusionScan TCGA_RNA-Seq TIAM1-PCBP3 TIAM1 chr21 32711557 - PCBP3 chr21 47316121 + Exonic hg19 HNSC TCGA-CR-7367 3 5'UTR-CDS Intra-chr q22.11 q22.3 Seq+ 6629 ChimerSeq FusionScan TCGA_RNA-Seq MPP5-EIF2S1 MPP5 chr14 67708250 + EIF2S1 chr14 67831483 + Exonic hg19 HNSC TCGA-CR-7367 2 5'UTR-5'UTR Intra-chr q23.3 q23.3 6630 ChimerSeq FusionScan TCGA_RNA-Seq TFB2M-SMYD3 TFB2M chr1 246711846 - SMYD3 chr1 246093239 - Exonic hg19 HNSC TCGA-CR-7367 2 In-Frame Intra-chr q44 q44 Transcription factor Seq+ 6631 ChimerSeq FusionScan TCGA_RNA-Seq ETV6-ST8SIA1 ETV6 chr12 11803094 + ST8SIA1 chr12 22354972 - Exonic hg19 HNSC TCGA-DQ-7593 2 Out-of-Frame Intra-chr p13.2 Tumor suppressor gene Transcription factor p12.1 6632 ChimerSeq FusionScan TCGA_RNA-Seq ADCY3-CENPO ADCY3 chr2 25141181 - CENPO chr2 25037244 + Exonic hg19 HNSC TCGA-DQ-7593 2 In-Frame Intra-chr p23.3 p23.3 6633 ChimerSeq FusionScan TCGA_RNA-Seq DYNC1H1-HSP90AA1 DYNC1H1 chr14 102489217 + HSP90AA1 chr14 102548781 - Exonic hg19 HNSC TCGA-DQ-7593 2 In-Frame Intra-chr q32.31 q32.31 Oncogene 6634 ChimerSeq FusionScan TCGA_RNA-Seq COBLL1-SLC38A11 COBLL1 chr2 165697665 - SLC38A11 chr2 165796066 - Exonic hg19 HNSC TCGA-QK-A6VB 2 Out-of-Frame Intra-chr q24.3 q24.3 Seq+ 6635 ChimerSeq FusionScan TCGA_RNA-Seq EIF2S2-NCOA6 EIF2S2 chr20 32686303 - NCOA6 chr20 33331145 - Exonic hg19 HNSC TCGA-BB-7866 2 In-Frame Intra-chr q11.22 q11.22 Seq+ 6636 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57760375 + VMP1 chr17 57915655 + Exonic hg19 HNSC TCGA-HD-7917 3 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 6637 ChimerSeq FusionScan TCGA_RNA-Seq SULF2-YLPM1 SULF2 chr20 46305237 - YLPM1 chr14 75301967 + Exonic hg19 HNSC TCGA-CR-7382 2 In-Frame Inter-chr q13.12 q24.3 6638 ChimerSeq FusionScan TCGA_RNA-Seq IFI35-BRCA1 IFI35 chr17 41164294 + BRCA1 chr17 41209152 - Exonic hg19 HNSC TCGA-CR-7382 2 In-Frame Intra-chr q21.31 q21.31 Oncogene Tumor suppressor gene 6639 ChimerSeq FusionScan TCGA_RNA-Seq CHM-MTM1 CHM chrX 85282494 - MTM1 chrX 149814155 + Exonic hg19 HNSC TCGA-BA-4074 2 Out-of-Frame Intra-chr q21.2 q28 6640 ChimerSeq FusionScan TCGA_RNA-Seq NKTR-RNF41 NKTR chr3 42674315 + RNF41 chr12 56602082 - Exonic hg19 HNSC TCGA-BA-4074 2 In-Frame Inter-chr p22.1 q13.3 6641 ChimerSeq FusionScan TCGA_RNA-Seq KPNA4-IFT80 KPNA4 chr3 160283001 - IFT80 chr3 160102434 - Exonic hg19 HNSC TCGA-CV-7413 2 CDS-5'UTR Intra-chr q25.33 q25.33 Seq+ 6642 ChimerSeq FusionScan TCGA_RNA-Seq C9orf86-KIAA1984 C9orf86 chr9 139702778 + KIAA1984 chr9 139697115 + Exonic hg19 HNSC TCGA-QK-AA3J 2 Out-of-Frame Intra-chr 6643 ChimerSeq FusionScan TCGA_RNA-Seq EGFR-ACADM EGFR chr7 55087058 + ACADM chr1 76198328 + Exonic hg19 HNSC TCGA-CV-6941 6 In-Frame Inter-chr p11.2 TK:EGFR Oncogene p31.1 Seq+ 6644 ChimerSeq FusionScan TCGA_RNA-Seq GPI-C9orf3 GPI chr19 34859607 + C9orf3 chr9 97848963 + Exonic hg19 HNSC TCGA-CV-6941 2 CDS-3'UTR Inter-chr q22.32 6645 ChimerSeq FusionScan TCGA_RNA-Seq SPEN-C1orf64 SPEN chr1 16174645 + C1orf64 chr1 16332413 + Exonic hg19 HNSC TCGA-CN-6024 5 Out-of-Frame Intra-chr p36.21 Transcription factor p36.13 Seq+ 6646 ChimerSeq FusionScan TCGA_RNA-Seq KBTBD2-PDE1C KBTBD2 chr7 32931147 - PDE1C chr7 32209568 - Exonic hg19 HNSC TCGA-BA-A8YP 4 5'UTR-CDS Intra-chr p14.3 p14.3 Seq+ 6647 ChimerSeq FusionScan TCGA_RNA-Seq KDM6A-DLL1 KDM6A chrX 44833960 + DLL1 chr6 170595386 - Exonic hg19 HNSC TCGA-BA-A8YP 2 Out-of-Frame Inter-chr p11.3 Oncogene Tumor suppressor gene Seq+ 6648 ChimerSeq FusionScan TCGA_RNA-Seq NRIP1-GDPD1 NRIP1 chr21 16437065 - GDPD1 chr17 57322774 + Exonic hg19 HNSC TCGA-BA-A8YP 2 5'UTR-CDS Inter-chr q21.1 q22 Seq+ 6649 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-IVNS1ABP CPSF6 chr12 69656342 + IVNS1ABP chr1 185274775 - Exonic hg19 HNSC TCGA-CN-5365 2 3'UTR-CDS Inter-chr q15 q25.3 6650 ChimerSeq FusionScan TCGA_RNA-Seq TAF9-PLXNB2 TAF9 chr5 68665483 - PLXNB2 chr22 50717440 - Exonic hg19 HNSC TCGA-BA-A4IF 2 Out-of-Frame Inter-chr q13.33 6651 ChimerSeq FusionScan TCGA_RNA-Seq LOH12CR1-CCT6A LOH12CR1 chr12 12514283 + CCT6A chr7 56120114 + Exonic hg19 HNSC TCGA-BB-4225 2 Out-of-Frame Inter-chr p11.2 6652 ChimerSeq FusionScan TCGA_RNA-Seq VGLL4-CHL1 VGLL4 chr3 11643306 - CHL1 chr3 407632 + Exonic hg19 HNSC TCGA-D6-6826 2 Out-of-Frame Intra-chr p25.2 p26.3 Seq+ 6653 ChimerSeq FusionScan TCGA_RNA-Seq ASMTL-P2RY8 ASMTL chrX 1553914 - P2RY8 chrY 1535475 - Exonic hg19 HNSC TCGA-D6-6826 2 5'UTR-5'UTR Inter-chr p22.33 p22.33 Seq+ 6654 ChimerSeq FusionScan TCGA_RNA-Seq FAM195B-P4HB FAM195B chr17 79782162 - P4HB chr17 79805223 - Exonic hg19 HNSC TCGA-CN-4729 3 Out-of-Frame Intra-chr q25.3 Seq+ 6655 ChimerSeq FusionScan TCGA_RNA-Seq MBTD1-SPG7 MBTD1 chr17 49336503 - SPG7 chr16 89590413 + Exonic hg19 HNSC TCGA-CN-4729 2 5'UTR-CDS Inter-chr q21.33 q24.3 6656 ChimerSeq FusionScan TCGA_RNA-Seq PARL-ABCC5 PARL chr3 183602509 - ABCC5 chr3 183732235 - Exonic hg19 HNSC TCGA-BA-A6DL 3 CDS-5'UTR Intra-chr q27.1 q27.1 Seq+ 6657 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0182-COX4NB KIAA0182 chr16 85647004 + COX4NB chr16 85822656 - Exonic hg19 HNSC TCGA-BA-A4II 3 Out-of-Frame Intra-chr Seq+ 6658 ChimerSeq FusionScan TCGA_RNA-Seq AKAP9-ANKIB1 AKAP9 chr7 91570461 + ANKIB1 chr7 91924202 + Exonic hg19 HNSC TCGA-BA-A4II 2 CDS-5'UTR Intra-chr q21.2 Oncogene q21.2 Seq+ 6659 ChimerSeq FusionScan TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105614952 - OBFC1 chr10 105642599 - Exonic hg19 HNSC TCGA-DQ-5630 4 Out-of-Frame Intra-chr q24.33 Seq+ 6660 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57697534 + VMP1 chr17 57915655 + Exonic hg19 HNSC TCGA-DQ-5630 3 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 6661 ChimerSeq FusionScan TCGA_RNA-Seq YWHAE-GLOD4 YWHAE chr17 1303340 - GLOD4 chr17 674701 - Exonic hg19 HNSC TCGA-CR-7383 5 In-Frame Intra-chr p13.3 p13.3 Seq+ 6662 ChimerSeq FusionScan TCGA_RNA-Seq SDCBP-PPHLN1 SDCBP chr8 59465862 + PPHLN1 chr12 42729684 + Exonic hg19 HNSC TCGA-BA-5557 2 5'UTR-5'UTR Inter-chr q12.1 q12 6663 ChimerSeq FusionScan TCGA_RNA-Seq WAC-MRPL46 WAC chr10 28824686 + MRPL46 chr15 89003094 - Exonic hg19 HNSC TCGA-CV-7099 2 In-Frame Inter-chr p12.1 q25.3 6664 ChimerSeq FusionScan TCGA_RNA-Seq ARID3B-EIF3J ARID3B chr15 74833671 + EIF3J chr15 44843073 + Exonic hg19 HNSC TCGA-BB-7870 2 5'UTR-CDS Intra-chr q24.1 Transcription factor q21.1 6665 ChimerSeq FusionScan TCGA_RNA-Seq PHLDB2-CD96 PHLDB2 chr3 111564782 + CD96 chr3 111366389 + Exonic hg19 HNSC TCGA-BA-5555 3 In-Frame Intra-chr q13.2 q13.13 Seq+ 6666 ChimerSeq FusionScan TCGA_RNA-Seq EBPL-LPAR6 EBPL chr13 50265389 - LPAR6 chr13 48989946 - Exonic hg19 HNSC TCGA-BA-5555 3 CDS-5'UTR Intra-chr q14.2 q14.2 Seq+ 6667 ChimerSeq FusionScan TCGA_RNA-Seq GTF2H2D-NAIP GTF2H2D chr5 68878256 + NAIP chr5 70266295 - Exonic hg19 HNSC TCGA-BA-5555 2 Out-of-Frame Intra-chr q13.2 6668 ChimerSeq FusionScan TCGA_RNA-Seq NOTCH1-SDCCAG3 NOTCH1 chr9 139438475 - SDCCAG3 chr9 139302390 - Exonic hg19 HNSC TCGA-BB-4224 2 Out-of-Frame Intra-chr q34.3 Oncogene Tumor suppressor gene q34.3 Seq+ 6669 ChimerSeq FusionScan TCGA_RNA-Seq TRAK2-KCTD18 TRAK2 chr2 202285139 - KCTD18 chr2 201371814 - Exonic hg19 HNSC TCGA-CV-7409 2 CDS-5'UTR Intra-chr q33.1 q33.1 Seq+ 6670 ChimerSeq FusionScan TCGA_RNA-Seq ZC3H3-TOP1MT ZC3H3 chr8 144618426 - TOP1MT chr8 144413509 - Exonic hg19 HNSC TCGA-CV-7238 2 Out-of-Frame Intra-chr q24.3 Seq+ 6671 ChimerSeq FusionScan TCGA_RNA-Seq DAPP1-COL4A3 DAPP1 chr4 100784229 + COL4A3 chr2 228176501 + Exonic hg19 HNSC TCGA-T2-A6X0 2 Out-of-Frame Inter-chr q23 q36.3 Seq+ 6672 ChimerSeq FusionScan TCGA_RNA-Seq BCL2L13-CUX2 BCL2L13 chr22 18138598 + CUX2 chr12 111772244 + Exonic hg19 HNSC TCGA-T2-A6X0 2 In-Frame Inter-chr q11.21 q24.11 Transcription factor Seq+ 6673 ChimerSeq FusionScan TCGA_RNA-Seq PGAP1-ZDBF2 PGAP1 chr2 197735664 - ZDBF2 chr2 207169440 + Exonic hg19 HNSC TCGA-CV-7568 2 Out-of-Frame Intra-chr q33.1 Seq+ 6674 ChimerSeq FusionScan TCGA_RNA-Seq SLCO3A1-MTFMT SLCO3A1 chr15 92459688 + MTFMT chr15 65297274 - Exonic hg19 HNSC TCGA-CV-7568 2 In-Frame Intra-chr q26.1 q22.31 6675 ChimerSeq FusionScan TCGA_RNA-Seq COBLL1-MTERFD1 COBLL1 chr2 165697665 - MTERFD1 chr8 97269342 - Exonic hg19 HNSC TCGA-CV-7568 2 Out-of-Frame Inter-chr q24.3 6676 ChimerSeq FusionScan TCGA_RNA-Seq C20orf7-SLC7A1 C20orf7 chr20 13765936 + SLC7A1 chr13 30127997 - Exonic hg19 HNSC TCGA-CV-7568 2 5'UTR-5'UTR Inter-chr q12.3 6677 ChimerSeq FusionScan TCGA_RNA-Seq ZNF780A-CAPN12 ZNF780A chr19 40596072 - CAPN12 chr19 39233168 - Exonic hg19 HNSC TCGA-CR-6488 2 5'UTR-CDS Intra-chr Transcription factor q13.2 6678 ChimerSeq FusionScan TCGA_RNA-Seq MAP2-ICA1L MAP2 chr2 210289000 + ICA1L chr2 203680732 - Exonic hg19 HNSC TCGA-BA-A6DE 4 5'UTR-CDS Intra-chr q34 q33.2 Seq+ 6679 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57752204 + VMP1 chr17 57915655 + Exonic hg19 HNSC TCGA-QK-A6IG 5 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 6680 ChimerSeq FusionScan TCGA_RNA-Seq RAB11B-B2M RAB11B chr19 8455340 + B2M chr15 45007620 + Exonic hg19 HNSC TCGA-QK-A6IG 2 In-Frame Inter-chr p13.2 Oncogene 6681 ChimerSeq FusionScan TCGA_RNA-Seq MACROD1-TCN1 MACROD1 chr11 63918710 - TCN1 chr11 59622308 - Exonic hg19 HNSC TCGA-CN-A49C 7 In-Frame Intra-chr q13.1 q12.1 Seq+ 6682 ChimerSeq FusionScan TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105614952 - OBFC1 chr10 105652010 - Exonic hg19 HNSC TCGA-CV-7242 2 In-Frame Intra-chr q24.33 Seq+ 6683 ChimerSeq FusionScan TCGA_RNA-Seq APTX-NOL6 APTX chr9 33001564 - NOL6 chr9 33472410 - Exonic hg19 HNSC TCGA-CR-7376 2 Out-of-Frame Intra-chr p21.1 p13.3 Seq+ 6684 ChimerSeq FusionScan TCGA_RNA-Seq TSC1-DOLPP1 TSC1 chr9 135796749 - DOLPP1 chr9 131848987 + Exonic hg19 HNSC TCGA-CR-6487 4 In-Frame Intra-chr q34.13 Oncogene Tumor suppressor gene q34.11 Seq+ 6685 ChimerSeq FusionScan TCGA_RNA-Seq TMX2-CTNND1 TMX2 chr11 57506732 + CTNND1 chr11 57561481 + Exonic hg19 HNSC TCGA-CR-6487 2 In-Frame Intra-chr q12.1 q12.1 Tumor suppressor gene 6686 ChimerSeq FusionScan TCGA_RNA-Seq RAI1-PEMT RAI1 chr17 17627473 + PEMT chr17 17480341 - Exonic hg19 HNSC TCGA-BA-6869 2 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 6687 ChimerSeq FusionScan TCGA_RNA-Seq TGIF1-C9orf3 TGIF1 chr18 3456578 + C9orf3 chr9 97848963 + Exonic hg19 HNSC TCGA-BA-6869 2 CDS-3'UTR Inter-chr p11.31 Transcription factor q22.32 6688 ChimerSeq FusionScan TCGA_RNA-Seq PEMT-RAI1 PEMT chr17 17480233 - RAI1 chr17 17627341 + Exonic hg19 HNSC TCGA-BA-6869 2 CDS-5'UTR Intra-chr p11.2 p11.2 Seq+ 6689 ChimerSeq FusionScan TCGA_RNA-Seq KLHL2-OPTN KLHL2 chr4 166220808 + OPTN chr10 13165994 + Exonic hg19 HNSC TCGA-BA-6869 2 In-Frame Inter-chr q32.3 p13 6690 ChimerSeq FusionScan TCGA_RNA-Seq OR51B5-HBG1 OR51B5 chr11 5367002 - HBG1 chr11 5270820 - Exonic hg19 HNSC TCGA-CQ-6225 2 5'UTR-CDS Intra-chr p15.4 p15.4 Seq+ 6691 ChimerSeq FusionScan TCGA_RNA-Seq POLR2D-ASAP2 POLR2D chr2 128615601 - ASAP2 chr2 9496175 + Exonic hg19 HNSC TCGA-CQ-6225 2 In-Frame Intra-chr q14.3 p25.1 6692 ChimerSeq FusionScan TCGA_RNA-Seq OBSCN-CASZ1 OBSCN chr1 228412435 + CASZ1 chr1 10725628 - Exonic hg19 HNSC TCGA-BB-4223 2 In-Frame Intra-chr q42.13 p36.22 Transcription factor Seq+ 6693 ChimerSeq FusionScan TCGA_RNA-Seq MIR205HG-LPHN2 MIR205HG chr1 209602753 + LPHN2 chr1 82431741 + Exonic hg19 HNSC TCGA-CN-5369 2 Out-of-Frame Intra-chr q32.2 6694 ChimerSeq FusionScan TCGA_RNA-Seq ADD1-ADK ADD1 chr4 2845751 + ADK chr10 76153898 + Exonic hg19 HNSC TCGA-CV-5978 3 5'UTR-CDS Inter-chr p16.3 q22.2 Seq+ 6695 ChimerSeq FusionScan TCGA_RNA-Seq TAF9-PLXNB2 TAF9 chr5 68665483 - PLXNB2 chr22 50717440 - Exonic hg19 HNSC TCGA-BA-A4IF 2 Out-of-Frame Inter-chr q13.33 6696 ChimerSeq FusionScan TCGA_RNA-Seq DDRGK1-RAC1 DDRGK1 chr20 3175475 - RAC1 chr7 6439756 + Exonic hg19 HNSC TCGA-DQ-7594 2 In-Frame Inter-chr p13 p22.1 Oncogene 6697 ChimerSeq FusionScan TCGA_RNA-Seq MPP5-COX16 MPP5 chr14 67790529 + COX16 chr14 70795953 - Exonic hg19 HNSC TCGA-DQ-7594 2 In-Frame Intra-chr q23.3 q24.2 6698 ChimerSeq FusionScan TCGA_RNA-Seq BCL2L11-MERTK BCL2L11 chr2 111907724 + MERTK chr2 112751827 + Exonic hg19 HNSC TCGA-DQ-7594 2 In-Frame Intra-chr q13 Tumor suppressor gene q13 Seq+ 6699 ChimerSeq FusionScan TCGA_RNA-Seq NFE2L2-RFTN2 NFE2L2 chr2 178129259 - RFTN2 chr2 198437004 - Exonic hg19 HNSC TCGA-DQ-7594 2 In-Frame Intra-chr q31.2 Oncogene Transcription factor q33.1 Seq+ 6700 ChimerSeq FusionScan TCGA_RNA-Seq LINC00152-RNF13 LINC00152 chr2 87779942 + RNF13 chr3 149677842 + Exonic hg19 HNSC TCGA-DQ-7594 2 5'UTR-CDS Inter-chr q25.1 6701 ChimerSeq FusionScan TCGA_RNA-Seq RPS27A-MIR4426 RPS27A chr2 55462098 + MIR4426 chr2 55461299 + Exonic hg19 HNSC TCGA-CV-6955 2 CDS-5'UTR Intra-chr p16.1 q31.2 6702 ChimerSeq FusionScan TCGA_RNA-Seq P4HB-CDK5RAP3 P4HB chr17 79813328 - CDK5RAP3 chr17 46055197 + Exonic hg19 HNSC TCGA-CV-6955 2 In-Frame Intra-chr q25.3 q21.32 6703 ChimerSeq FusionScan TCGA_RNA-Seq KDM2A-KTN1 KDM2A chr11 66888829 + KTN1 chr14 56128239 + Exonic hg19 HNSC TCGA-D6-6517 2 Out-of-Frame Inter-chr q13.2 Transcription factor q22.3 6704 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57697534 + VMP1 chr17 57915655 + Exonic hg19 HNSC TCGA-D6-6517 2 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 6705 ChimerSeq FusionScan TCGA_RNA-Seq NUAK2-LEMD1 NUAK2 chr1 205280832 - LEMD1 chr1 205389702 - Exonic hg19 HNSC TCGA-BA-6871 4 CDS-5'UTR Intra-chr q32.1 q32.1 Seq+ 6706 ChimerSeq FusionScan TCGA_RNA-Seq SLTM-ATL2 SLTM chr15 59193458 - ATL2 chr2 38523255 - Exonic hg19 HNSC TCGA-BA-6871 2 Out-of-Frame Inter-chr q22.1 p22.1 6707 ChimerSeq FusionScan TCGA_RNA-Seq NR4A1-IL20RB NR4A1 chr12 52435713 + IL20RB chr3 136699307 + Exonic hg19 HNSC TCGA-BA-6871 2 In-Frame Inter-chr q13.13 Tumor suppressor gene Transcription factor q22.3 Seq+ 6708 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57737949 + VMP1 chr17 57915655 + Exonic hg19 HNSC TCGA-P3-A6T4 5 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 6709 ChimerSeq FusionScan TCGA_RNA-Seq CHST11-TXNRD1 CHST11 chr12 104995769 + TXNRD1 chr12 104742130 + Exonic hg19 HNSC TCGA-P3-A6T4 2 In-Frame Intra-chr q23.3 q23.3 Seq+ 6710 ChimerSeq FusionScan TCGA_RNA-Seq TPX2-RALY TPX2 chr20 30366787 + RALY chr20 32659871 + Exonic hg19 HNSC TCGA-CV-6959 2 CDS-5'UTR Intra-chr q11.21 q11.22 Seq+ 6711 ChimerSeq FusionScan TCGA_RNA-Seq SCAP-SMARCC1 SCAP chr3 47517288 - SMARCC1 chr3 47712207 - Exonic hg19 HNSC TCGA-CV-6962 6 5'UTR-CDS Intra-chr p21.31 p21.31 Tumor suppressor gene Seq+ 6712 ChimerSeq FusionScan TCGA_RNA-Seq AKAP8-SUGP2 AKAP8 chr19 15490523 - SUGP2 chr19 19112483 - Exonic hg19 HNSC TCGA-CV-6962 2 In-Frame Intra-chr p13.12 Transcription factor p13.11 6713 ChimerSeq FusionScan TCGA_RNA-Seq SCAF1-FLT3LG SCAF1 chr19 50156962 + FLT3LG chr19 49982165 + Exonic hg19 HNSC TCGA-CN-4731 3 Out-of-Frame Intra-chr q13.33 q13.33 Seq+ 6714 ChimerSeq FusionScan TCGA_RNA-Seq PPP3CC-PIWIL2 PPP3CC chr8 22333137 + PIWIL2 chr8 22138632 + Exonic hg19 HNSC TCGA-CN-4731 2 In-Frame Intra-chr p21.3 Tumor suppressor gene p21.3 Tumor suppressor gene Seq+ 6715 ChimerSeq FusionScan TCGA_RNA-Seq ANKFY1-MRPL9 ANKFY1 chr17 4145550 - MRPL9 chr1 151733375 - Exonic hg19 HNSC TCGA-CN-4731 2 Out-of-Frame Inter-chr p13.2 q21.3 6716 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-HSF2BP TMPRSS2 chr21 42843732 - HSF2BP chr21 44949842 - Exonic hg19 HNSC TCGA-P3-A6T8 7 In-Frame Intra-chr q22.3 q22.3 Seq+ 6717 ChimerSeq FusionScan TCGA_RNA-Seq SLC35G2-IL20RB SLC35G2 chr3 136538056 + IL20RB chr3 136699307 + Exonic hg19 HNSC TCGA-P3-A6T8 2 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 6718 ChimerSeq FusionScan TCGA_RNA-Seq EIF3A-TBC1D1 EIF3A chr10 120809312 - TBC1D1 chr4 38091552 + Exonic hg19 HNSC TCGA-P3-A6T8 2 Out-of-Frame Inter-chr q26.11 p14 Seq+ 6719 ChimerSeq FusionScan TCGA_RNA-Seq PTRH2-VMP1 PTRH2 chr17 57784731 - VMP1 chr17 57886156 + Exonic hg19 HNSC TCGA-CX-7086 6 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 6720 ChimerSeq FusionScan TCGA_RNA-Seq VMP1-PTRH2 VMP1 chr17 57785109 + PTRH2 chr17 57775339 - Exonic hg19 HNSC TCGA-CX-7086 2 5'UTR-5'UTR Intra-chr q23.1 q23.1 Seq+ 6721 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D10A-POLR3H TBC1D10A chr22 30695432 - POLR3H chr22 41936799 - Exonic hg19 HNSC TCGA-CX-7086 2 In-Frame Intra-chr q12.2 q13.2 Seq+ 6722 ChimerSeq FusionScan TCGA_RNA-Seq THBS1-AGBL1 THBS1 chr15 39881555 + AGBL1 chr15 86790901 + Exonic hg19 HNSC TCGA-CV-6960 10 Out-of-Frame Intra-chr q14 Oncogene Tumor suppressor gene q25.3 Seq+ 6723 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175388437 - Exonic hg19 HNSC TCGA-DQ-7595 3 5'UTR-CDS Inter-chr q21.1 q35.2 6724 ChimerSeq FusionScan TCGA_RNA-Seq SPRY2-PSPC1 SPRY2 chr13 80914756 - PSPC1 chr13 20251963 - Exonic hg19 KICH TCGA-KM-8439 2 5'UTR-3'UTR Intra-chr q31.1 Tumor suppressor gene q12.11 6725 ChimerSeq FusionScan TCGA_RNA-Seq SLC43A2-VAT1 SLC43A2 chr17 1516488 - VAT1 chr17 41170816 - Exonic hg19 KICH TCGA-KO-8415 2 In-Frame Intra-chr q21.31 6726 ChimerSeq FusionScan TCGA_RNA-Seq PROSC-TOR1AIP1 PROSC chr8 37623873 + TOR1AIP1 chr1 179869260 + Exonic hg19 KICH TCGA-KN-8427 2 In-Frame Inter-chr q25.2 6727 ChimerSeq FusionScan TCGA_RNA-Seq HECTD1-DHRS4 HECTD1 chr14 31614012 - DHRS4 chr14 24424243 + Exonic hg19 KICH TCGA-KL-8339 2 Out-of-Frame Intra-chr q12 q11.2 6728 ChimerSeq FusionScan TCGA_RNA-Seq BACE2-FAM3B BACE2 chr21 42629253 + FAM3B chr21 42694849 + Exonic hg19 KICH TCGA-KL-8329 2 In-Frame Intra-chr q22.2 q22.3 Seq+ 6729 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB38-RPL22 ZBTB38 chr3 141087646 + RPL22 chr1 6257816 - Exonic hg19 KICH TCGA-KO-8404 2 5'UTR-CDS Inter-chr q23 Transcription factor p36.31 6730 ChimerSeq FusionScan TCGA_RNA-Seq HSD17B12-WT1 HSD17B12 chr11 43702537 + WT1 chr11 32450165 - Exonic hg19 KICH TCGA-KL-8335 4 In-Frame Intra-chr p11.2 p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 6731 ChimerSeq FusionScan TCGA_RNA-Seq TH1L-CHD6 TH1L chr20 57568167 + CHD6 chr20 40086068 - Exonic hg19 KICH TCGA-KO-8409 2 In-Frame Intra-chr q12 6732 ChimerSeq FusionScan TCGA_RNA-Seq PDCD6-TERT PDCD6 chr5 272887 + TERT chr5 1282739 - Exonic hg19 KIRC TCGA-BP-4991 3 In-Frame Intra-chr p15.33 p15.33 Oncogene Seq+ 6733 ChimerSeq FusionScan TCGA_RNA-Seq AFF1-ANO6 AFF1 chr4 87869723 + ANO6 chr12 45761470 + Exonic hg19 KIRC TCGA-BP-4790 2 In-Frame Inter-chr q21.3 Oncogene q12 6734 ChimerSeq FusionScan TCGA_RNA-Seq SLC31A1-TMEM219 SLC31A1 chr9 116021142 + TMEM219 chr16 29974430 + Exonic hg19 KIRC TCGA-BP-4790 2 CDS-5'UTR Inter-chr q32 p11.2 6735 ChimerSeq FusionScan TCGA_RNA-Seq PDPR-VIM PDPR chr16 70164447 + VIM chr10 17276691 + Exonic hg19 KIRC TCGA-BP-4790 2 In-Frame Inter-chr q22.1 p13 Tumor suppressor gene 6736 ChimerSeq FusionScan TCGA_RNA-Seq CAMK1D-MCM5 CAMK1D chr10 12391909 + MCM5 chr22 35806736 + Exonic hg19 KIRC TCGA-BP-4790 2 In-Frame Inter-chr p13 q12.3 6737 ChimerSeq FusionScan TCGA_RNA-Seq RNF216-EIF2AK1 RNF216 chr7 5756346 - EIF2AK1 chr7 6064432 - Exonic hg19 KIRC TCGA-DV-5576 3 In-Frame Intra-chr p22.1 p22.1 Seq+ 6738 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0319L-GOLGA1 KIAA0319L chr1 35972212 - GOLGA1 chr9 127652757 - Exonic hg19 KIRC TCGA-DV-5576 2 In-Frame Inter-chr p34.3 q33.3 Seq+ 6739 ChimerSeq FusionScan TCGA_RNA-Seq SLC25A29-WARS SLC25A29 chr14 100765178 - WARS chr14 100813183 - Exonic hg19 KIRC TCGA-BP-4331 2 Out-of-Frame Intra-chr q32.2 q32.2 Seq+ 6740 ChimerSeq FusionScan TCGA_RNA-Seq TMEM63B-MRPL14 TMEM63B chr6 44122182 + MRPL14 chr6 44084366 - Exonic hg19 KIRC TCGA-B0-4836 3 CDS-5'UTR Intra-chr p21.1 p21.1 Seq+ 6741 ChimerSeq FusionScan TCGA_RNA-Seq WASH1-DCAF5 WASH1 chr9 16717 - DCAF5 chr14 69529228 - Exonic hg19 KIRC TCGA-B0-4836 2 In-Frame Inter-chr q24.1 6742 ChimerSeq FusionScan TCGA_RNA-Seq PCMTD1-MTCP1NB PCMTD1 chr8 52758220 - MTCP1NB chrX 154292308 - Exonic hg19 KIRC TCGA-B0-4836 2 CDS-5'UTR Inter-chr q11.23 6743 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 KIRC TCGA-AK-3453 2 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 6744 ChimerSeq FusionScan TCGA_RNA-Seq TLK2-METTL2B TLK2 chr17 60558567 + METTL2B chr7 128119211 + Exonic hg19 KIRC TCGA-B0-5077 3 Out-of-Frame Inter-chr q23.2 Other:TLK q32.1 6745 ChimerSeq FusionScan TCGA_RNA-Seq USP45-MYL12B USP45 chr6 99912479 - MYL12B chr18 3277250 + Exonic hg19 KIRC TCGA-B4-5835 2 Out-of-Frame Inter-chr q16.2 p11.31 6746 ChimerSeq FusionScan TCGA_RNA-Seq ERLIN1-FIP1L1 ERLIN1 chr10 101935701 - FIP1L1 chr4 54319086 + Exonic hg19 KIRC TCGA-MW-A4EC 2 In-Frame Inter-chr q24.31 q12 6747 ChimerSeq FusionScan TCGA_RNA-Seq SLC28A1-UBE2D2 SLC28A1 chr15 85427982 + UBE2D2 chr5 138979956 + Exonic hg19 KIRC TCGA-CW-5589 2 5'UTR-5'UTR Inter-chr q25.3 q31.2 Seq+ 6748 ChimerSeq FusionScan TCGA_RNA-Seq DMGDH-NMNAT2 DMGDH chr5 78301095 - NMNAT2 chr1 183230438 - Exonic hg19 KIRC TCGA-CW-5589 2 In-Frame Inter-chr q14.1 q25.3 Seq+ 6749 ChimerSeq FusionScan TCGA_RNA-Seq AGPS-LMNA AGPS chr2 178310354 + LMNA chr1 156104595 + Exonic hg19 KIRC TCGA-B0-5399 2 In-Frame Inter-chr q31.2 q22 6750 ChimerSeq FusionScan TCGA_RNA-Seq KDM2A-ZNF410 KDM2A chr11 66888829 + ZNF410 chr14 74390097 + Exonic hg19 KIRC TCGA-BP-4770 2 Out-of-Frame Inter-chr q13.2 Transcription factor q24.3 Transcription factor 6751 ChimerSeq FusionScan TCGA_RNA-Seq SCARF2-FKBP8 SCARF2 chr22 20791868 - FKBP8 chr19 18652805 - Exonic hg19 KIRC TCGA-BP-4770 2 CDS-5'UTR Inter-chr q11.21 p13.11 6752 ChimerSeq FusionScan TCGA_RNA-Seq TMEM141-TBC1D15 TMEM141 chr9 139685876 + TBC1D15 chr12 72307605 + Exonic hg19 KIRC TCGA-BP-4770 2 Out-of-Frame Inter-chr q34.3 q21.1 6753 ChimerSeq FusionScan TCGA_RNA-Seq ZNF512-SLC4A1AP ZNF512 chr2 27806009 + SLC4A1AP chr2 27916551 + Exonic hg19 KIRC TCGA-BP-4770 2 In-Frame Intra-chr p23.3 Transcription factor p23.3 6754 ChimerSeq FusionScan TCGA_RNA-Seq ANXA11-ZMIZ1 ANXA11 chr10 81917396 - ZMIZ1 chr10 81036937 + Exonic hg19 KIRC TCGA-BP-4770 2 Out-of-Frame Intra-chr q22.3 q22.3 6755 ChimerSeq FusionScan TCGA_RNA-Seq MAP2K4-CCBL1 MAP2K4 chr17 11924318 + CCBL1 chr9 131600416 - Exonic hg19 KIRC TCGA-A3-3378 2 Out-of-Frame Inter-chr p12 STE:STE7 Oncogene Tumor suppressor gene Seq+ 6756 ChimerSeq FusionScan TCGA_RNA-Seq SFMBT2-EPB41L2 SFMBT2 chr10 7262372 - EPB41L2 chr6 131161738 - Exonic hg19 KIRP TCGA-DW-7838 2 CDS-3'UTR Inter-chr p14 q23.2 6757 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD11-RAB11FIP3 ANKRD11 chr16 89371613 - RAB11FIP3 chr16 538850 + Exonic hg19 KIRP TCGA-IA-A40X 2 Out-of-Frame Intra-chr q24.3 Seq+ 6758 ChimerSeq FusionScan TCGA_RNA-Seq MAP3K3-BRIP1 MAP3K3 chr17 61744420 + BRIP1 chr17 59763526 - Exonic hg19 KIRP TCGA-2Z-A9JI 3 In-Frame Intra-chr q23.3 STE:STE11 q23.2 Oncogene Seq+ 6759 ChimerSeq FusionScan TCGA_RNA-Seq MKL2-ERI3 MKL2 chr16 14173211 + ERI3 chr1 44750579 - Exonic hg19 KIRP TCGA-BQ-7058 2 5'UTR-CDS Inter-chr p13.12 p34.1 6760 ChimerSeq FusionScan TCGA_RNA-Seq CFI-RPL34 CFI chr4 110723070 - RPL34 chr4 109543670 + Exonic hg19 KIRP TCGA-P4-A5E6 2 In-Frame Intra-chr q25 q25 6761 ChimerSeq FusionScan TCGA_RNA-Seq PIK3C3-OXR1 PIK3C3 chr18 39629569 + OXR1 chr8 107749747 + Exonic hg19 KIRP TCGA-P4-A5E6 2 Out-of-Frame Inter-chr q12.3 q23.1 6762 ChimerSeq FusionScan TCGA_RNA-Seq CFLAR-AGBL5 CFLAR chr2 201997857 + AGBL5 chr2 27290361 + Exonic hg19 KIRP TCGA-A4-A5Y0 4 Out-of-Frame Intra-chr q33.1 p23.3 Seq+ 6763 ChimerSeq FusionScan TCGA_RNA-Seq ZNF318-COL21A1 ZNF318 chr6 43316061 - COL21A1 chr6 55990947 - Exonic hg19 KIRP TCGA-UZ-A9PQ 3 In-Frame Intra-chr p21.1 Transcription factor p12.1 Seq+ 6764 ChimerSeq FusionScan TCGA_RNA-Seq CD2AP-TRERF1 CD2AP chr6 47522502 + TRERF1 chr6 42268487 - Exonic hg19 KIRP TCGA-UZ-A9PQ 2 CDS-5'UTR Intra-chr p12.3 p21.1 Transcription factor Seq+ 6765 ChimerSeq FusionScan TCGA_RNA-Seq NFAT5-CSMD2 NFAT5 chr16 69600277 + CSMD2 chr1 34015950 - Exonic hg19 KIRP TCGA-SX-A71S 7 In-Frame Inter-chr q22.1 Transcription factor p35.1 Seq+ 6766 ChimerSeq FusionScan TCGA_RNA-Seq UTRN-COL4A2 UTRN chr6 144898424 + COL4A2 chr13 111114460 + Exonic hg19 KIRP TCGA-A4-7828 2 In-Frame Inter-chr q24.2 q34 6767 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 KIRP TCGA-BQ-7062 3 Out-of-Frame Intra-chr q22.2 q22.2 6768 ChimerSeq FusionScan TCGA_RNA-Seq SULT1A2-CLN3 SULT1A2 chr16 28608317 - CLN3 chr16 28497971 - Exonic hg19 KIRP TCGA-BQ-5878 2 5'UTR-CDS Intra-chr p11.2 p12.1 6769 ChimerSeq FusionScan TCGA_RNA-Seq KLHL24-ATP11B KLHL24 chr3 183390272 + ATP11B chr3 182631648 + Exonic hg19 KIRP TCGA-G7-6793 5 In-Frame Intra-chr q27.1 q26.33 Oncogene Seq+ 6770 ChimerSeq FusionScan TCGA_RNA-Seq PTPRA-VPS16 PTPRA chr20 2903931 + VPS16 chr20 2840364 + Exonic hg19 KIRP TCGA-G7-6793 4 5'UTR-CDS Intra-chr p13 p13 Seq+ 6771 ChimerSeq FusionScan TCGA_RNA-Seq PIK3CB-SEMA5B PIK3CB chr3 138452202 - SEMA5B chr3 122667556 - Exonic hg19 KIRP TCGA-G7-6793 4 Out-of-Frame Intra-chr q22.3 Oncogene q21.1 Seq+ 6772 ChimerSeq FusionScan TCGA_RNA-Seq SEMA5B-PLS1 SEMA5B chr3 122667352 - PLS1 chr3 142422709 + Exonic hg19 KIRP TCGA-G7-6793 3 Out-of-Frame Intra-chr q21.1 q23 Seq+ 6773 ChimerSeq FusionScan TCGA_RNA-Seq RPN1-MAP6D1 RPN1 chr3 128363761 - MAP6D1 chr3 183535899 - Exonic hg19 KIRP TCGA-G7-6793 2 In-Frame Intra-chr q21.3 q27.1 Seq+ 6774 ChimerSeq FusionScan TCGA_RNA-Seq CDV3-KLHL24 CDV3 chr3 133293959 + KLHL24 chr3 183390083 + Exonic hg19 KIRP TCGA-G7-6793 2 Out-of-Frame Intra-chr q22.1 q27.1 Seq+ 6775 ChimerSeq FusionScan TCGA_RNA-Seq RAB7A-PARP15 RAB7A chr3 128445202 + PARP15 chr3 122324782 + Exonic hg19 KIRP TCGA-G7-6793 2 5'UTR-CDS Intra-chr q21.3 Tumor suppressor gene q21.1 Seq+ 6776 ChimerSeq FusionScan TCGA_RNA-Seq PIK3CB-HHLA2 PIK3CB chr3 138478014 - HHLA2 chr3 108070634 + Exonic hg19 KIRP TCGA-G7-6793 2 CDS-5'UTR Intra-chr q22.3 Oncogene q13.13 Seq+ 6777 ChimerSeq FusionScan TCGA_RNA-Seq DPP4-PDK1 DPP4 chr2 162902041 - PDK1 chr2 173451005 + Exonic hg19 KIRP TCGA-Q2-A5QZ 3 In-Frame Intra-chr q24.2 Tumor suppressor gene q31.1 AGC:PDK1 Seq+ 6778 ChimerSeq FusionScan TCGA_RNA-Seq BAIAP2L1-MET BAIAP2L1 chr7 97939756 - MET chr7 116414934 + Exonic hg19 KIRP TCGA-BQ-7049 5 In-Frame Intra-chr q22.1 q31.2 TK:Met Oncogene Seq+ 6779 ChimerSeq FusionScan TCGA_RNA-Seq GATS-PILRB GATS chr7 99820219 - PILRB chr7 99952765 + Exonic hg19 KIRP TCGA-BQ-7049 2 3'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 6780 ChimerSeq FusionScan TCGA_RNA-Seq GAS7-MYH1 GAS7 chr17 10101524 - MYH1 chr17 10415863 - Exonic hg19 KIRP TCGA-BQ-7049 2 In-Frame Intra-chr p13.1 p13.1 Seq+ 6781 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 KIRP TCGA-DW-7839 2 Out-of-Frame Intra-chr q22.2 q22.2 6782 ChimerSeq FusionScan TCGA_RNA-Seq PRCC-TFE3 PRCC chr1 156738031 + TFE3 chrX 48895967 - Exonic hg19 KIRP TCGA-BQ-5882 7 In-Frame Inter-chr q23.1 p11.23 Oncogene Transcription factor KB Pub Seq+ 6783 ChimerSeq FusionScan TCGA_RNA-Seq TFE3-PRCC TFE3 chrX 48896631 - PRCC chr1 156752073 + Exonic hg19 KIRP TCGA-BQ-5882 2 In-Frame Inter-chr p11.23 Oncogene Transcription factor q23.1 KB Seq+ 6784 ChimerSeq FusionScan TCGA_RNA-Seq ESYT2-VIPR2 ESYT2 chr7 158580694 - VIPR2 chr7 158851269 - Exonic hg19 KIRP TCGA-GL-8500 3 In-Frame Intra-chr q36.3 q36.3 Seq+ 6785 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD33B-NIPBL ANKRD33B chr5 10564945 + NIPBL chr5 37058992 + Exonic hg19 KIRP TCGA-B9-A5W9 8 In-Frame Intra-chr p15.2 p13.2 Seq+ 6786 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD33B-NIPBL ANKRD33B chr5 10564945 + NIPBL chr5 37063891 + Exonic hg19 KIRP TCGA-B9-A5W9 7 In-Frame Intra-chr p15.2 p13.2 Seq+ 6787 ChimerSeq FusionScan TCGA_RNA-Seq ATP5J-HCN1 ATP5J chr21 27107163 - HCN1 chr5 45462109 - Exonic hg19 KIRP TCGA-B9-A5W9 3 5'UTR-CDS Inter-chr q21.3 p12 Seq+ 6788 ChimerSeq FusionScan TCGA_RNA-Seq NDUFS4-TMPRSS2 NDUFS4 chr5 52954454 + TMPRSS2 chr21 42838080 - Exonic hg19 KIRP TCGA-B9-A5W9 2 Out-of-Frame Inter-chr q11.2 q22.3 Seq+ 6789 ChimerSeq FusionScan TCGA_RNA-Seq SLC22A5-RAD50 SLC22A5 chr5 131722843 + RAD50 chr5 131976363 + Exonic hg19 KIRP TCGA-BQ-5876 3 In-Frame Intra-chr q31.1 q31.1 Oncogene Seq+ 6790 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R18-MDC1 PPP1R18 chr6 30654890 - MDC1 chr6 30668409 - Exonic hg19 KIRP TCGA-BQ-5891 2 5'UTR-5'UTR Intra-chr p21.33 Tumor suppressor gene Seq+ 6791 ChimerSeq FusionScan TCGA_RNA-Seq HNF1B-NOTCH1 HNF1B chr17 36099430 - NOTCH1 chr9 139396940 - Exonic hg19 KIRP TCGA-BQ-7053 15 In-Frame Inter-chr q12 Transcription factor q34.3 Oncogene Tumor suppressor gene Seq+ 6792 ChimerSeq FusionScan TCGA_RNA-Seq NOTCH1-HNF1B NOTCH1 chr9 139397633 - HNF1B chr17 36093736 - Exonic hg19 KIRP TCGA-BQ-7053 8 In-Frame Inter-chr q34.3 Oncogene Tumor suppressor gene q12 Transcription factor Seq+ 6793 ChimerSeq FusionScan TCGA_RNA-Seq NOTCH1-HNF1B NOTCH1 chr9 139397633 - HNF1B chr17 36093814 - Exonic hg19 KIRP TCGA-BQ-7053 4 In-Frame Inter-chr q34.3 Oncogene Tumor suppressor gene q12 Transcription factor Seq+ 6794 ChimerSeq FusionScan TCGA_RNA-Seq GAPVD1-YWHAB GAPVD1 chr9 128024238 + YWHAB chr20 43530171 + Exonic hg19 KIRP TCGA-BQ-7053 2 5'UTR-5'UTR Inter-chr q33.3 q13.12 6795 ChimerSeq FusionScan TCGA_RNA-Seq NRBP1-FOXRED1 NRBP1 chr2 27651598 + FOXRED1 chr11 126146965 + Exonic hg19 KIRP TCGA-MH-A857 2 5'UTR-5'UTR Inter-chr p23.3 Other:NRBP Tumor suppressor gene q24.2 6796 ChimerSeq FusionScan TCGA_RNA-Seq NAV1-CEP164 NAV1 chr1 201709204 + CEP164 chr11 117209281 + Exonic hg19 KIRP TCGA-B9-4113 2 CDS-5'UTR Inter-chr q32.1 q23.3 6797 ChimerSeq FusionScan TCGA_RNA-Seq IL9R-FLJ43681 IL9R chrY 59338150 + FLJ43681 chr17 81187692 + Exonic hg19 KIRP TCGA-DZ-6132 3 5'UTR-5'UTR Inter-chr q28 6798 ChimerSeq FusionScan TCGA_RNA-Seq TTYH3-NOC4L TTYH3 chr7 2671912 + NOC4L chr12 132635525 + Exonic hg19 KIRP TCGA-A4-A772 2 Out-of-Frame Inter-chr p22.3 q24.33 Seq+ 6799 ChimerSeq FusionScan TCGA_RNA-Seq PPARA-SAMM50 PPARA chr22 46547873 + SAMM50 chr22 44384990 + Exonic hg19 KIRP TCGA-P4-A5EB 7 5'UTR-CDS Intra-chr q13.31 Tumor suppressor gene Transcription factor q13.31 Seq+ 6800 ChimerSeq FusionScan TCGA_RNA-Seq SDHA-MIF SDHA chr5 236714 + MIF chr22 24236958 + Exonic hg19 KIRP TCGA-P4-A5EB 6 Out-of-Frame Inter-chr p15.33 Oncogene Tumor suppressor gene q11.23 Tumor suppressor gene Seq+ 6801 ChimerSeq FusionScan TCGA_RNA-Seq PPARA-SAMM50 PPARA chr22 46572733 + SAMM50 chr22 44384990 + Exonic hg19 KIRP TCGA-P4-A5EB 4 5'UTR-CDS Intra-chr q13.31 Tumor suppressor gene Transcription factor q13.31 Seq+ 6802 ChimerSeq FusionScan TCGA_RNA-Seq ZFR-RAI14 ZFR chr5 32444334 - RAI14 chr5 34796043 + Exonic hg19 KIRP TCGA-P4-A5EB 2 In-Frame Intra-chr p13.3 p13.2 Seq+ 6803 ChimerSeq FusionScan TCGA_RNA-Seq PLXNB2-MAST4 PLXNB2 chr22 50722030 - MAST4 chr5 66195778 + Exonic hg19 KIRP TCGA-P4-A5EB 2 Out-of-Frame Inter-chr q13.33 q12.3 AGC:MAST Seq+ 6804 ChimerSeq FusionScan TCGA_RNA-Seq TYW1B-VWC2 TYW1B chr7 72277658 - VWC2 chr7 49951629 + Exonic hg19 KIRP TCGA-A4-A4ZT 3 Out-of-Frame Intra-chr q11.23 p12.2 Seq+ 6805 ChimerSeq FusionScan TCGA_RNA-Seq FAM134B-TERT FAM134B chr5 16508686 - TERT chr5 1282739 - Exonic hg19 KIRP TCGA-UZ-A9PN 2 Out-of-Frame Intra-chr p15.33 Oncogene Seq+ 6806 ChimerSeq FusionScan TCGA_RNA-Seq C7orf50-CD177 C7orf50 chr7 1166892 - CD177 chr19 43858004 + Exonic hg19 KIRP TCGA-B9-A44B 3 Out-of-Frame Inter-chr p22.3 q13.31 Seq+ 6807 ChimerSeq FusionScan TCGA_RNA-Seq BMS1-PDXDC1 BMS1 chr10 43294073 + PDXDC1 chr16 15129872 + Exonic hg19 KIRP TCGA-A4-8310 2 Out-of-Frame Inter-chr q11.21 p13.11 6808 ChimerSeq FusionScan TCGA_RNA-Seq EMX1-HLX EMX1 chr2 73145501 + HLX chr1 221057536 + Exonic hg19 KIRP TCGA-B9-A5W7 2 Out-of-Frame Inter-chr p13.2 Transcription factor q41 Transcription factor 6809 ChimerSeq FusionScan TCGA_RNA-Seq PRCC-TFE3 PRCC chr1 156738031 + TFE3 chrX 48895967 - Exonic hg19 KIRP TCGA-BQ-5887 3 In-Frame Inter-chr q23.1 p11.23 Oncogene Transcription factor KB Pub Seq+ 6810 ChimerSeq FusionScan TCGA_RNA-Seq EEF2K-ACSM3 EEF2K chr16 22262643 + ACSM3 chr16 20781305 + Exonic hg19 KIRP TCGA-BQ-5887 2 CDS-5'UTR Intra-chr p12.2 p12.3 Seq+ 6811 ChimerSeq FusionScan TCGA_RNA-Seq TFE3-PRCC TFE3 chrX 48896631 - PRCC chr1 156756399 + Exonic hg19 KIRP TCGA-BQ-5887 2 In-Frame Inter-chr p11.23 Oncogene Transcription factor q23.1 KB Seq+ 6812 ChimerSeq FusionScan TCGA_RNA-Seq SFPQ-TFE3 SFPQ chr1 35654603 - TFE3 chrX 48898095 - Exonic hg19 KIRP TCGA-SX-A7SO 4 In-Frame Inter-chr p34.3 p11.23 Oncogene Transcription factor KB Pub Seq+ 6813 ChimerSeq FusionScan TCGA_RNA-Seq TEF-L3MBTL3 TEF chr22 41763603 + L3MBTL3 chr6 130343371 + Exonic hg19 KIRP TCGA-BQ-5889 2 CDS-5'UTR Inter-chr q13.2 Transcription factor q23.1 Transcription factor 6814 ChimerSeq FusionScan TCGA_RNA-Seq CBFA2T2-RALY CBFA2T2 chr20 32078107 + RALY chr20 32619327 + Exonic hg19 KIRP TCGA-2Z-A9J5 2 CDS-5'UTR Intra-chr q11.21 q11.22 6815 ChimerSeq FusionScan TCGA_RNA-Seq CLCF1-PPP1CA CLCF1 chr11 67140994 - PPP1CA chr11 67168670 - Exonic hg19 KIRP TCGA-BQ-5890 5 In-Frame Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 6816 ChimerSeq FusionScan TCGA_RNA-Seq MRI1-MYO1F MRI1 chr19 13879862 + MYO1F chr19 8587713 - Exonic hg19 KIRP TCGA-BQ-5890 2 In-Frame Intra-chr p13.13 p13.2 Seq+ 6817 ChimerSeq FusionScan TCGA_RNA-Seq CUL9-KIF6 CUL9 chr6 43156453 + KIF6 chr6 39311591 - Exonic hg19 KIRP TCGA-B9-A69E 8 In-Frame Intra-chr p21.1 p21.2 Seq+ 6818 ChimerSeq FusionScan TCGA_RNA-Seq CUL9-KIF6 CUL9 chr6 43155856 + KIF6 chr6 39311591 - Exonic hg19 KIRP TCGA-B9-A69E 2 Out-of-Frame Intra-chr p21.1 p21.2 Seq+ 6819 ChimerSeq FusionScan TCGA_RNA-Seq PRCC-TFE3 PRCC chr1 156738031 + TFE3 chrX 48895967 - Exonic hg19 KIRP TCGA-BQ-7050 3 In-Frame Inter-chr q23.1 p11.23 Oncogene Transcription factor KB Pub Seq+ 6820 ChimerSeq FusionScan TCGA_RNA-Seq DCTN3-IPO9 DCTN3 chr9 34617881 - IPO9 chr1 201821231 + Exonic hg19 KIRP TCGA-AT-A5NU 2 In-Frame Inter-chr p13.3 q32.1 6821 ChimerSeq FusionScan TCGA_RNA-Seq GNPTG-PTTG1IP GNPTG chr16 1402307 + PTTG1IP chr21 46276279 - Exonic hg19 KIRP TCGA-AT-A5NU 2 In-Frame Inter-chr p13.3 q22.3 6822 ChimerSeq FusionScan TCGA_RNA-Seq SNAP91-RIN3 SNAP91 chr6 84417516 - RIN3 chr14 93081751 + Exonic hg19 KIRP TCGA-BQ-5884 2 In-Frame Inter-chr q14.2 q32.12 6823 ChimerSeq FusionScan TCGA_RNA-Seq RBM10-TFE3 RBM10 chrX 47041725 + TFE3 chrX 48895639 - Exonic hg19 KIRP TCGA-DZ-6131 6 In-Frame Intra-chr p11.3 p11.23 Oncogene Transcription factor KB Pub Seq+ 6824 ChimerSeq FusionScan TCGA_RNA-Seq HDAC3-DIAPH1 HDAC3 chr5 141004774 - DIAPH1 chr5 140967817 - Exonic hg19 KIRP TCGA-DZ-6131 2 Out-of-Frame Intra-chr q31.3 Tumor suppressor gene q31.3 6825 ChimerSeq FusionScan TCGA_RNA-Seq DECR1-UBE2G1 DECR1 chr8 91013789 + UBE2G1 chr17 4210418 - Exonic hg19 KIRP TCGA-BQ-7060 2 Out-of-Frame Inter-chr q21.3 p13.2 6826 ChimerSeq FusionScan TCGA_RNA-Seq STRN-ALK STRN chr2 37143220 - ALK chr2 29446394 - Exonic hg19 KIRP TCGA-G7-6792 4 In-Frame Intra-chr p22.2 p23.1 TK:ALK Oncogene KB Pub Seq+ 6827 ChimerSeq FusionScan TCGA_RNA-Seq CRIM1-HAAO CRIM1 chr2 36726490 + HAAO chr2 42997722 - Exonic hg19 KIRP TCGA-G7-6792 2 Out-of-Frame Intra-chr p22.2 p21 Seq+ 6828 ChimerSeq FusionScan TCGA_RNA-Seq KDM3A-CRIM1 KDM3A chr2 86691339 + CRIM1 chr2 36691676 + Exonic hg19 KIRP TCGA-G7-6792 2 In-Frame Intra-chr p11.2 Tumor suppressor gene p22.2 Seq+ 6829 ChimerSeq FusionScan TCGA_RNA-Seq LRBA-CHCHD3 LRBA chr4 151199004 - CHCHD3 chr7 132481338 - Exonic hg19 KIRP TCGA-G7-A8LD 7 In-Frame Inter-chr q31.3 q33 Transcription factor Seq+ 6830 ChimerSeq FusionScan TCGA_RNA-Seq CTPS1-ASB3 CTPS1 chr1 41474562 + ASB3 chr2 53897827 - Exonic hg19 KIRP TCGA-G7-A8LD 4 In-Frame Inter-chr p34.2 p16.2 Seq+ 6831 ChimerSeq FusionScan TCGA_RNA-Seq OAZ2-SPAST OAZ2 chr15 64995227 - SPAST chr2 32366972 + Exonic hg19 KIRP TCGA-G7-A8LD 2 In-Frame Inter-chr q22.31 p22.3 Seq+ 6832 ChimerSeq FusionScan TCGA_RNA-Seq AKAP7-COG2 AKAP7 chr6 131540948 + COG2 chr1 230820830 + Exonic hg19 KIRP TCGA-B9-5156 2 In-Frame Inter-chr q23.2 q42.2 6833 ChimerSeq FusionScan TCGA_RNA-Seq COPZ2-MPV17 COPZ2 chr17 46109521 - MPV17 chr2 27535114 - Exonic hg19 KIRP TCGA-BQ-5880 2 Out-of-Frame Inter-chr q21.32 p23.3 6834 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0319L-UBA6 KIAA0319L chr1 35972212 - UBA6 chr4 68534392 - Exonic hg19 KIRP TCGA-J7-8537 4 In-Frame Inter-chr p34.3 q13.2 Seq+ 6835 ChimerSeq FusionScan TCGA_RNA-Seq GSR-CSMD1 GSR chr8 30541604 - CSMD1 chr8 2887035 - Exonic hg19 KIRP TCGA-J7-8537 2 In-Frame Intra-chr p12 p23.2 Tumor suppressor gene Seq+ 6836 ChimerSeq FusionScan TCGA_RNA-Seq TFE3-DVL2 TFE3 chrX 48897981 - DVL2 chr17 7132766 - Exonic hg19 KIRP TCGA-J7-8537 2 Out-of-Frame Inter-chr p11.23 Oncogene Transcription factor p13.1 Seq+ 6837 ChimerSeq FusionScan TCGA_RNA-Seq CSDC2-ACO2 CSDC2 chr22 41957187 + ACO2 chr22 41895729 + Exonic hg19 KIRP TCGA-J7-8537 2 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 6838 ChimerSeq FusionScan TCGA_RNA-Seq DVL2-TFE3 DVL2 chr17 7133126 - TFE3 chrX 48896935 - Exonic hg19 KIRP TCGA-J7-8537 2 In-Frame Inter-chr p13.1 p11.23 Oncogene Transcription factor KB Pub Seq+ 6839 ChimerSeq FusionScan TCGA_RNA-Seq SFPQ-TFE3 SFPQ chr1 35654603 - TFE3 chrX 48898095 - Exonic hg19 KIRP TCGA-G7-7501 6 In-Frame Inter-chr p34.3 p11.23 Oncogene Transcription factor KB Pub Seq+ 6840 ChimerSeq FusionScan TCGA_RNA-Seq ASPM-PRKAG2 ASPM chr1 197113086 - PRKAG2 chr7 151372723 - Exonic hg19 KIRP TCGA-G7-7501 2 Out-of-Frame Inter-chr q31.3 q36.1 6841 ChimerSeq FusionScan TCGA_RNA-Seq EML4-ALK EML4 chr2 42472827 + ALK chr2 29446394 - Exonic hg19 KIRP TCGA-2Z-A9JJ 4 In-Frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 6842 ChimerSeq FusionScan TCGA_RNA-Seq PXN-PLA2G1B PXN chr12 120703419 - PLA2G1B chr12 120760120 - Exonic hg19 KIRP TCGA-SX-A7SM 2 In-Frame Intra-chr q24.23 q24.31 Seq+ 6843 ChimerSeq FusionScan TCGA_RNA-Seq LTBR-PRSS3 LTBR chr12 6495610 + PRSS3 chr9 33796640 + Exonic hg19 KIRP TCGA-P4-AAVM 6 In-Frame Inter-chr p13.31 p13.3 Seq+ 6844 ChimerSeq FusionScan TCGA_RNA-Seq TICAM1-C19orf10 TICAM1 chr19 4831625 - C19orf10 chr19 4664949 - Exonic hg19 KIRP TCGA-B3-3925 2 5'UTR-CDS Intra-chr p13.3 6845 ChimerSeq FusionScan TCGA_RNA-Seq SRPK2-PRKAR2B SRPK2 chr7 104800953 - PRKAR2B chr7 106791366 + Exonic hg19 KIRP TCGA-5P-A9JZ 4 In-Frame Intra-chr q22.3 CMGC:SRPK Seq+ 6846 ChimerSeq FusionScan TCGA_RNA-Seq BRAF-CUL1 BRAF chr7 140549910 - CUL1 chr7 148427053 + Exonic hg19 KIRP TCGA-5P-A9JZ 3 CDS-5'UTR Intra-chr q34 TKL:RAF Oncogene q36.1 Tumor suppressor gene Seq+ 6847 ChimerSeq FusionScan TCGA_RNA-Seq BACE2-FAM3B BACE2 chr21 42540502 + FAM3B chr21 42710304 + Exonic hg19 KIRP TCGA-A4-A5Y1 2 Out-of-Frame Intra-chr q22.2 q22.3 Seq+ 6848 ChimerSeq FusionScan TCGA_RNA-Seq BACE2-FAM3B BACE2 chr21 42629253 + FAM3B chr21 42710304 + Exonic hg19 KIRP TCGA-A4-A5Y1 2 In-Frame Intra-chr q22.2 q22.3 Seq+ 6849 ChimerSeq FusionScan TCGA_RNA-Seq ACACA-DDX52 ACACA chr17 35766351 - DDX52 chr17 35974398 - Exonic hg19 KIRP TCGA-P4-A5E7 2 In-Frame Intra-chr q12 Seq+ 6850 ChimerSeq FusionScan TCGA_RNA-Seq ZNF791-HOOK2 ZNF791 chr19 12721896 + HOOK2 chr19 12874592 - Exonic hg19 KIRP TCGA-HE-7130 4 In-Frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 6851 ChimerSeq FusionScan TCGA_RNA-Seq PTPN21-TTC8 PTPN21 chr14 89016581 - TTC8 chr14 89305795 + Exonic hg19 KIRP TCGA-HE-7130 2 In-Frame Intra-chr q31.3 q31.3 Seq+ 6852 ChimerSeq FusionScan TCGA_RNA-Seq CREM-MCMBP CREM chr10 35416495 + MCMBP chr10 121609088 - Exonic hg19 KIRP TCGA-G7-A8LE 2 5'UTR-CDS Intra-chr p11.21 Tumor suppressor gene Transcription factor q26.11 6853 ChimerSeq FusionScan TCGA_RNA-Seq MET-C8orf34 MET chr7 116412043 + C8orf34 chr8 69358563 + Exonic hg19 KIRP TCGA-GL-7773 5 In-Frame Inter-chr q31.2 TK:Met Oncogene q13.2 Seq+ 6854 ChimerSeq FusionScan TCGA_RNA-Seq C8orf34-MET C8orf34 chr8 69351881 + MET chr7 116414934 + Exonic hg19 KIRP TCGA-GL-7773 3 In-Frame Inter-chr q13.2 q31.2 TK:Met Oncogene Seq+ 6855 ChimerSeq FusionScan TCGA_RNA-Seq ZNF277-IMMP2L ZNF277 chr7 111958328 + IMMP2L chr7 110303777 - Exonic hg19 KIRP TCGA-B9-4116 9 Out-of-Frame Intra-chr q31.1 Transcription factor q31.1 Seq+ 6856 ChimerSeq FusionScan TCGA_RNA-Seq AKAP9-ZNF3 AKAP9 chr7 91570461 + ZNF3 chr7 99675056 - Exonic hg19 KIRP TCGA-B9-4116 6 CDS-5'UTR Intra-chr q21.2 Oncogene q22.1 Transcription factor Seq+ 6857 ChimerSeq FusionScan TCGA_RNA-Seq ZC3HC1-ADAM22 ZC3HC1 chr7 129691060 - ADAM22 chr7 87704940 + Exonic hg19 KIRP TCGA-B9-4116 4 In-Frame Intra-chr q32.2 q21.12 Seq+ 6858 ChimerSeq FusionScan TCGA_RNA-Seq AKAP9-ZNF3 AKAP9 chr7 91570461 + ZNF3 chr7 99673253 - Exonic hg19 KIRP TCGA-B9-4116 3 Out-of-Frame Intra-chr q21.2 Oncogene q22.1 Transcription factor Seq+ 6859 ChimerSeq FusionScan TCGA_RNA-Seq AKAP9-ZNF3 AKAP9 chr7 91570461 + ZNF3 chr7 99677279 - Exonic hg19 KIRP TCGA-B9-4116 2 CDS-5'UTR Intra-chr q21.2 Oncogene q22.1 Transcription factor Seq+ 6860 ChimerSeq FusionScan TCGA_RNA-Seq NOTCH2-ACSM2B NOTCH2 chr1 120465258 - ACSM2B chr16 20576175 - Exonic hg19 KIRP TCGA-BQ-7056 2 CDS-5'UTR Inter-chr p12 Oncogene Tumor suppressor gene p12.3 Seq+ 6861 ChimerSeq FusionScan TCGA_RNA-Seq NSF-LRRC37B NSF chr17 44782220 + LRRC37B chr17 30351729 + Exonic hg19 LAML TCGA-AB-2946 2 Out-of-Frame Intra-chr q11.2 6862 ChimerSeq FusionScan TCGA_RNA-Seq NUCB1-RUVBL2 NUCB1 chr19 49407711 + RUVBL2 chr19 49513032 + Exonic hg19 LAML TCGA-AB-2935 3 In-Frame Intra-chr q13.33 q13.33 Seq+ 6863 ChimerSeq FusionScan TCGA_RNA-Seq SLC2A5-SH3KBP1 SLC2A5 chr1 9129562 - SH3KBP1 chrX 19555898 - Exonic hg19 LAML TCGA-AB-2808 2 Out-of-Frame Inter-chr p36.23 p22.12 6864 ChimerSeq FusionScan TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 + MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2892 2 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 6865 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPH1-ERG HNRNPH1 chr5 179047892 - ERG chr21 39755845 - Exonic hg19 LAML TCGA-AB-2814 6 In-Frame Inter-chr q35.3 q22.2 Oncogene Transcription factor Seq+ 6866 ChimerSeq FusionScan TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 + MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2815 4 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 6867 ChimerSeq FusionScan TCGA_RNA-Seq IQCE-FSCN1 IQCE chr7 2598851 + FSCN1 chr7 5642887 + Exonic hg19 LAML TCGA-AB-2815 2 Out-of-Frame Intra-chr p22.3 p22.1 6868 ChimerSeq FusionScan TCGA_RNA-Seq PML-RARA PML chr15 74315749 + RARA chr17 38504567 + Exonic hg19 LAML TCGA-AB-3007 5 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 6869 ChimerSeq FusionScan TCGA_RNA-Seq EIF4A1-KLF2 EIF4A1 chr17 7476182 + KLF2 chr19 16437666 + Exonic hg19 LAML TCGA-AB-2810 3 Out-of-Frame Inter-chr p13.1 p13.11 Transcription factor Seq+ 6870 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD11-EBAG9 ANKRD11 chr16 89484691 - EBAG9 chr8 110563038 + Exonic hg19 LAML TCGA-AB-2810 2 5'UTR-5'UTR Inter-chr q24.3 q23.2 6871 ChimerSeq FusionScan TCGA_RNA-Seq CCDC104-METTL9 CCDC104 chr2 55750958 + METTL9 chr16 21629185 + Exonic hg19 LAML TCGA-AB-2833 2 Out-of-Frame Inter-chr 6872 ChimerSeq FusionScan TCGA_RNA-Seq RUNX1-MECOM RUNX1 chr21 36206706 - MECOM chr3 169099312 - Exonic hg19 LAML TCGA-AB-2915 4 In-Frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q26.2 Transcription factor KB Pub Seq+ 6873 ChimerSeq FusionScan TCGA_RNA-Seq DPM1-GRID1 DPM1 chr20 49571722 - GRID1 chr10 87675996 - Exonic hg19 LAML TCGA-AB-2915 2 In-Frame Inter-chr q13.13 q23.2 Seq+ 6874 ChimerSeq FusionScan TCGA_RNA-Seq SIK3-C11orf1 SIK3 chr11 116968858 - C11orf1 chr11 111753091 + Exonic hg19 LAML TCGA-AB-2832 4 In-Frame Intra-chr q23.3 q23.1 Seq+ 6875 ChimerSeq FusionScan TCGA_RNA-Seq RNF220-ZXDC RNF220 chr1 44878394 + ZXDC chr3 126181063 - Exonic hg19 LAML TCGA-AB-2969 2 In-Frame Inter-chr p34.1 q21.3 Transcription factor 6876 ChimerSeq FusionScan TCGA_RNA-Seq NSD1-NUP98 NSD1 chr5 176639196 + NUP98 chr11 3756554 - Exonic hg19 LAML TCGA-AB-2856 2 In-Frame Inter-chr q35.3 Oncogene p15.4 Oncogene Tumor suppressor gene KB Pub Seq+ 6877 ChimerSeq FusionScan TCGA_RNA-Seq ABL1-BCR ABL1 chr9 133589842 + BCR chr22 23634727 + Exonic hg19 LAML TCGA-AB-2941 2 In-Frame Inter-chr q34.12 TK:Abl Oncogene q11.23 Atypical:BCR Oncogene Tumor suppressor gene Seq+ 6878 ChimerSeq FusionScan TCGA_RNA-Seq INTS4L2-KSR1 INTS4L2 chr7 65112960 + KSR1 chr17 25877593 + Exonic hg19 LAML TCGA-AB-2941 2 5'UTR-5'UTR Inter-chr q11.2 TKL:RAF 6879 ChimerSeq FusionScan TCGA_RNA-Seq PML-RARA PML chr15 74325755 + RARA chr17 38504567 + Exonic hg19 LAML TCGA-AB-2862 2 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 6880 ChimerSeq FusionScan TCGA_RNA-Seq RPS11-FLT3LG RPS11 chr19 50001303 + FLT3LG chr19 49977859 + Exonic hg19 LAML TCGA-AB-2912 8 5'UTR-5'UTR Intra-chr q13.33 q13.33 Seq+ 6881 ChimerSeq FusionScan TCGA_RNA-Seq POLR2A-FBN3 POLR2A chr17 7388176 + FBN3 chr19 8156474 - Exonic hg19 LAML TCGA-AB-2938 3 Out-of-Frame Inter-chr p13.1 p13.2 Seq+ 6882 ChimerSeq FusionScan TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 + MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2881 2 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 6883 ChimerSeq FusionScan TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 + MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2870 2 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 6884 ChimerSeq FusionScan TCGA_RNA-Seq SMARCA2-YWHAH SMARCA2 chr9 2015404 + YWHAH chr22 32352125 + Exonic hg19 LAML TCGA-AB-2990 2 5'UTR-CDS Inter-chr p24.3 Tumor suppressor gene q12.3 6885 ChimerSeq FusionScan TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 + MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2846 4 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 6886 ChimerSeq FusionScan TCGA_RNA-Seq RARA-PML RARA chr17 38487648 + PML chr15 74326818 + Exonic hg19 LAML TCGA-AB-2994 4 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 6887 ChimerSeq FusionScan TCGA_RNA-Seq PICALM-MLLT10 PICALM chr11 85685750 - MLLT10 chr10 21940601 + Exonic hg19 LAML TCGA-AB-2849 2 In-Frame Inter-chr q14.2 p12.31 Oncogene KB Pub Seq+ 6888 ChimerSeq FusionScan TCGA_RNA-Seq MLLT10-PICALM MLLT10 chr10 21906136 + PICALM chr11 85670103 - Exonic hg19 LAML TCGA-AB-2849 2 In-Frame Inter-chr p12.31 Oncogene q14.2 KB Pub Seq+ 6889 ChimerSeq FusionScan TCGA_RNA-Seq RARA-PML RARA chr17 38487648 + PML chr15 74326818 + Exonic hg19 LAML TCGA-AB-2841 2 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 6890 ChimerSeq FusionScan TCGA_RNA-Seq EIF4A1-DDX5 EIF4A1 chr17 7476182 + DDX5 chr17 62500960 - Exonic hg19 LAML TCGA-AB-2812 2 In-Frame Intra-chr p13.1 q23.3 6891 ChimerSeq FusionScan TCGA_RNA-Seq NSD1-NUP98 NSD1 chr5 176639196 + NUP98 chr11 3756554 - Exonic hg19 LAML TCGA-AB-2930 3 In-Frame Inter-chr q35.3 Oncogene p15.4 Oncogene Tumor suppressor gene KB Pub Seq+ 6892 ChimerSeq FusionScan TCGA_RNA-Seq CDC73-FAM172A CDC73 chr1 193121574 + FAM172A chr5 92956835 - Exonic hg19 LAML TCGA-AB-2939 3 Out-of-Frame Inter-chr q31.2 Oncogene Tumor suppressor gene q15 Tumor suppressor gene Seq+ 6893 ChimerSeq FusionScan TCGA_RNA-Seq CHD1-MTOR CHD1 chr5 98199111 - MTOR chr1 11273623 - Exonic hg19 LAML TCGA-AB-2939 3 Out-of-Frame Inter-chr q21.1 Tumor suppressor gene p36.22 Oncogene Seq+ 6894 ChimerSeq FusionScan TCGA_RNA-Seq BZW2-GUSB BZW2 chr7 16714213 + GUSB chr7 65432894 - Exonic hg19 LAML TCGA-AB-2939 2 Out-of-Frame Intra-chr p21.1 q11.21 Seq+ 6895 ChimerSeq FusionScan TCGA_RNA-Seq UBE2Q2-DKFZP434L187 UBE2Q2 chr15 76165909 + DKFZP434L187 chr15 30491477 + Exonic hg19 LAML TCGA-AB-2986 2 CDS-5'UTR Intra-chr q24.2 6896 ChimerSeq FusionScan TCGA_RNA-Seq TPM4-KLF2 TPM4 chr19 16187507 + KLF2 chr19 16437666 + Exonic hg19 LAML TCGA-AB-2944 2 Out-of-Frame Intra-chr p13.12 p13.11 Transcription factor 6897 ChimerSeq FusionScan TCGA_RNA-Seq PML-RARA PML chr15 74315749 + RARA chr17 38504567 + Exonic hg19 LAML TCGA-AB-3007 2 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 6898 ChimerSeq FusionScan TCGA_RNA-Seq ATP5C1-VCAN ATP5C1 chr10 7841157 + VCAN chr5 82832825 + Exonic hg19 LAML TCGA-AB-2965 2 Out-of-Frame Inter-chr p14 q14.2 6899 ChimerSeq FusionScan TCGA_RNA-Seq BCR-ABL1 BCR chr22 23632600 + ABL1 chr9 133729450 + Exonic hg19 LAML TCGA-AB-2901 2 In-Frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q34.12 TK:Abl Oncogene KB Pub Seq+ 6900 ChimerSeq FusionScan TCGA_RNA-Seq TTI1-CTNNBL1 TTI1 chr20 36661805 - CTNNBL1 chr20 36488300 + Exonic hg19 LAML TCGA-AB-2867 2 5'UTR-CDS Intra-chr q11.23 q11.23 6901 ChimerSeq FusionScan TCGA_RNA-Seq MRPL12-CCDC137 MRPL12 chr17 79671746 + CCDC137 chr17 79634758 + Exonic hg19 LAML TCGA-AB-2889 2 Out-of-Frame Intra-chr q25.3 q25.3 6902 ChimerSeq FusionScan TCGA_RNA-Seq RARA-PML RARA chr17 38487648 + PML chr15 74317197 + Exonic hg19 LAML TCGA-AB-3001 2 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 6903 ChimerSeq FusionScan TCGA_RNA-Seq RARA-PML RARA chr17 38499119 + PML chr15 74326818 + Exonic hg19 LAML TCGA-AB-3012 2 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 6904 ChimerSeq FusionScan TCGA_RNA-Seq BCR-ABL1 BCR chr22 23524426 + ABL1 chr9 133729450 + Exonic hg19 LAML TCGA-AB-2817 2 In-Frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q34.12 TK:Abl Oncogene KB Pub Seq+ 6905 ChimerSeq FusionScan TCGA_RNA-Seq PML-RARA PML chr15 74315749 + RARA chr17 38504567 + Exonic hg19 LAML TCGA-AB-3007 5 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 6906 ChimerSeq FusionScan TCGA_RNA-Seq RPS9-CDC45 RPS9 chr19 54705477 + CDC45 chr22 19468475 + Exonic hg19 LAML TCGA-AB-2894 2 3'UTR-CDS Inter-chr q11.21 6907 ChimerSeq FusionScan TCGA_RNA-Seq DNMT3B-MDM4 DNMT3B chr20 31390276 + MDM4 chr1 204494611 + Exonic hg19 LAML TCGA-AB-2904 3 CDS-5'UTR Inter-chr q11.21 Tumor suppressor gene q32.1 Oncogene Seq+ 6908 ChimerSeq FusionScan TCGA_RNA-Seq HIST1H2BD-RNF19A HIST1H2BD chr6 26158787 + RNF19A chr8 101300495 - Exonic hg19 LAML TCGA-AB-2904 2 3'UTR-5'UTR Inter-chr p22.2 q22.2 6909 ChimerSeq FusionScan TCGA_RNA-Seq CCDC82-L3MBTL3 CCDC82 chr11 96123007 - L3MBTL3 chr6 130343371 + Exonic hg19 LAML TCGA-AB-2978 2 5'UTR-5'UTR Inter-chr q21 q23.1 Transcription factor 6910 ChimerSeq FusionScan TCGA_RNA-Seq ZEB2-CXCR4 ZEB2 chr2 145277505 - CXCR4 chr2 136873482 - Exonic hg19 LAML TCGA-AB-2835 2 5'UTR-CDS Intra-chr q22.3 Transcription factor q22.1 6911 ChimerSeq FusionScan TCGA_RNA-Seq RARA-PML RARA chr17 38487648 + PML chr15 74317197 + Exonic hg19 LAML TCGA-AB-2840 2 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 6912 ChimerSeq FusionScan TCGA_RNA-Seq RPS9-CDC45 RPS9 chr19 54705477 + CDC45 chr22 19468475 + Exonic hg19 LAML TCGA-AB-2894 2 3'UTR-CDS Inter-chr q11.21 6913 ChimerSeq FusionScan TCGA_RNA-Seq CBFA2T3-NOC4L CBFA2T3 chr16 89007427 - NOC4L chr12 132635525 + Exonic hg19 LGG TCGA-HT-A61B 2 5'UTR-CDS Inter-chr q24.3 Tumor suppressor gene q24.33 6914 ChimerSeq FusionScan TCGA_RNA-Seq CEP85L-SNX3 CEP85L chr6 119031198 - SNX3 chr6 108544249 - Exonic hg19 LGG TCGA-CS-6186 4 5'UTR-CDS Intra-chr q22.31 q21 6915 ChimerSeq FusionScan TCGA_RNA-Seq FGFR3-ELAVL3 FGFR3 chr4 1808661 + ELAVL3 chr19 11577642 - Exonic hg19 LGG TCGA-CS-6186 3 In-Frame Inter-chr p16.3 TK:FGFR Oncogene p13.2 Seq+ 6916 ChimerSeq FusionScan TCGA_RNA-Seq BRAP-KLRB1 BRAP chr12 112123514 - KLRB1 chr12 9754195 - Exonic hg19 LGG TCGA-RY-A83Z 4 In-Frame Intra-chr q24.12 p13.31 Seq+ 6917 ChimerSeq FusionScan TCGA_RNA-Seq EFTUD2-PFKL EFTUD2 chr17 42956923 - PFKL chr21 45745843 + Exonic hg19 LGG TCGA-DU-7298 2 In-Frame Inter-chr q21.31 q22.3 6918 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-QH-A870 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 6919 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-DU-8165 3 Out-of-Frame Intra-chr q22.2 q22.2 6920 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT6 NDUFA11 chr19 5896463 - FUT6 chr19 5832590 - Exonic hg19 LGG TCGA-HW-8320 2 CDS-5'UTR Intra-chr p13.3 p13.3 6921 ChimerSeq FusionScan TCGA_RNA-Seq MRPL21-CPT1A MRPL21 chr11 68660357 - CPT1A chr11 68582955 - Exonic hg19 LGG TCGA-HW-8320 2 CDS-5'UTR Intra-chr q13.3 q13.3 Seq+ 6922 ChimerSeq FusionScan TCGA_RNA-Seq MAGED4B-CERKL MAGED4B chrX 51806082 - CERKL chr2 182413584 - Exonic hg19 LGG TCGA-HT-7468 2 Out-of-Frame Inter-chr p11.22 q31.3 6923 ChimerSeq FusionScan TCGA_RNA-Seq PCID2-SNRPA PCID2 chr13 113862912 - SNRPA chr19 41265335 + Exonic hg19 LGG TCGA-E1-A7Z2 7 In-Frame Inter-chr q34 q13.2 Seq+ 6924 ChimerSeq FusionScan TCGA_RNA-Seq PMS2-DNAH11 PMS2 chr7 6048627 - DNAH11 chr7 21813383 + Exonic hg19 LGG TCGA-E1-A7Z2 3 Out-of-Frame Intra-chr p22.1 Oncogene p15.3 Seq+ 6925 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-E1-A7Z2 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 6926 ChimerSeq FusionScan TCGA_RNA-Seq HDAC11-FBLN2 HDAC11 chr3 13525064 + FBLN2 chr3 13611814 + Exonic hg19 LGG TCGA-HW-8321 2 CDS-5'UTR Intra-chr p25.1 p25.1 6927 ChimerSeq FusionScan TCGA_RNA-Seq ATRX-BCL2 ATRX chrX 77041467 - BCL2 chr18 60795992 - Exonic hg19 LGG TCGA-DB-A4XF 3 Out-of-Frame Inter-chr q21.1 Oncogene q21.33 Oncogene Seq+ 6928 ChimerSeq FusionScan TCGA_RNA-Seq BCAS3-RNFT1 BCAS3 chr17 59161925 + RNFT1 chr17 58040645 - Exonic hg19 LGG TCGA-DB-A4XF 2 Out-of-Frame Intra-chr q23.2 q23.1 Seq+ 6929 ChimerSeq FusionScan TCGA_RNA-Seq MBTD1-UTP18 MBTD1 chr17 49337195 - UTP18 chr17 49362605 + Exonic hg19 LGG TCGA-F6-A8O4 7 5'UTR-CDS Intra-chr q21.33 q21.33 Seq+ 6930 ChimerSeq FusionScan TCGA_RNA-Seq MBTD1-UTP18 MBTD1 chr17 49336503 - UTP18 chr17 49362605 + Exonic hg19 LGG TCGA-F6-A8O4 3 5'UTR-CDS Intra-chr q21.33 q21.33 Seq+ 6931 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-HT-7485 4 5'UTR-5'UTR Intra-chr p16.2 p16.2 6932 ChimerSeq FusionScan TCGA_RNA-Seq CEP170-RAD51B CEP170 chr1 243349080 - RAD51B chr14 68758600 + Exonic hg19 LGG TCGA-HT-7485 2 In-Frame Inter-chr q24.1 6933 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-HT-7485 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 6934 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-TM-A7C5 3 Out-of-Frame Intra-chr q22.2 q22.2 6935 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-RY-A83Y 2 Out-of-Frame Intra-chr q22.2 q22.2 6936 ChimerSeq FusionScan TCGA_RNA-Seq SOX5-DLG2 SOX5 chr12 24715266 - DLG2 chr11 83243826 - Exonic hg19 LGG TCGA-TM-A84I 12 5'UTR-CDS Inter-chr p12.1 Transcription factor q14.1 6937 ChimerSeq FusionScan TCGA_RNA-Seq ADCY9-TEAD4 ADCY9 chr16 4163750 - TEAD4 chr12 3103903 + Exonic hg19 LGG TCGA-TM-A84I 9 CDS-5'UTR Inter-chr p13.3 p13.33 Transcription factor Seq+ 6938 ChimerSeq FusionScan TCGA_RNA-Seq LYST-NARS2 LYST chr1 236030142 - NARS2 chr11 78177059 - Exonic hg19 LGG TCGA-TM-A84I 8 5'UTR-CDS Inter-chr q42.3 q14.1 Seq+ 6939 ChimerSeq FusionScan TCGA_RNA-Seq MARCH9-SLCO1B1 2019_ 3_ 9_ chr12 58150867 + SLCO1B1 chr12 21325583 + Exonic hg19 LGG TCGA-TM-A84I 7 In-Frame Intra-chr q14.1 p12.1 Seq+ 6940 ChimerSeq FusionScan TCGA_RNA-Seq CCNF-NOL4 CCNF chr16 2489827 + NOL4 chr18 31673561 - Exonic hg19 LGG TCGA-TM-A84I 5 In-Frame Inter-chr p13.3 q12.1 Seq+ 6941 ChimerSeq FusionScan TCGA_RNA-Seq TSPAN9-LINC00592 TSPAN9 chr12 3192885 + LINC00592 chr12 52617229 + Exonic hg19 LGG TCGA-TM-A84I 3 5'UTR-5'UTR Intra-chr p13.33 q13.13 Seq+ 6942 ChimerSeq FusionScan TCGA_RNA-Seq GALNT1-TAF4B GALNT1 chr18 33234765 + TAF4B chr18 23937653 + Exonic hg19 LGG TCGA-TM-A84I 2 Out-of-Frame Intra-chr q12.2 q11.2 Seq+ 6943 ChimerSeq FusionScan TCGA_RNA-Seq SOX5-DLG2 SOX5 chr12 24715266 - DLG2 chr11 83183820 - Exonic hg19 LGG TCGA-TM-A84I 2 5'UTR-CDS Inter-chr p12.1 Transcription factor q14.1 6944 ChimerSeq FusionScan TCGA_RNA-Seq DTX3-PLEKHA5 DTX3 chr12 57998641 + PLEKHA5 chr12 19473495 + Exonic hg19 LGG TCGA-TM-A84I 2 5'UTR-CDS Intra-chr q13.3 p12.3 Seq+ 6945 ChimerSeq FusionScan TCGA_RNA-Seq TSPAN9-TEAD4 TSPAN9 chr12 3186619 + TEAD4 chr12 3126563 + Exonic hg19 LGG TCGA-TM-A84I 2 5'UTR-5'UTR Intra-chr p13.33 p13.33 Transcription factor 6946 ChimerSeq FusionScan TCGA_RNA-Seq TSPAN9-KRT7 TSPAN9 chr12 3192885 + KRT7 chr12 52628938 + Exonic hg19 LGG TCGA-TM-A84I 2 5'UTR-CDS Intra-chr p13.33 q13.13 Seq+ 6947 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-TM-A84M 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 6948 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-CS-5395 3 5'UTR-5'UTR Intra-chr p16.2 p16.2 6949 ChimerSeq FusionScan TCGA_RNA-Seq ST7-CFTR ST7 chr7 116593745 + CFTR chr7 117199517 + Exonic hg19 LGG TCGA-HT-A61C 3 Out-of-Frame Intra-chr q31.2 Tumor suppressor gene q31.2 Tumor suppressor gene Seq+ 6950 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-F6-A8O3 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 6951 ChimerSeq FusionScan TCGA_RNA-Seq GON4L-SSR2 GON4L chr1 155823066 - SSR2 chr1 155979441 - Exonic hg19 LGG TCGA-TM-A84R 2 Out-of-Frame Intra-chr q22 q22 Seq+ 6952 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-TM-A84R 2 Out-of-Frame Intra-chr q22.2 q22.2 6953 ChimerSeq FusionScan TCGA_RNA-Seq SNRPN-SNURF SNRPN chr15 25131736 + SNURF chr15 25207260 + Exonic hg19 LGG TCGA-TM-A84R 2 5'UTR-CDS Intra-chr q11.2 q11.2 6954 ChimerSeq FusionScan TCGA_RNA-Seq LRP6-NINJ2 LRP6 chr12 12332743 - NINJ2 chr12 675344 - Exonic hg19 LGG TCGA-E1-5304 4 In-Frame Intra-chr p13.33 Seq+ 6955 ChimerSeq FusionScan TCGA_RNA-Seq ZNF292-FLJ26245 ZNF292 chr6 87928449 + FLJ26245 chr16 34983131 + Exonic hg19 LGG TCGA-E1-5304 4 CDS-5'UTR Inter-chr q14.3 Tumor suppressor gene Transcription factor 6956 ChimerSeq FusionScan TCGA_RNA-Seq VCP-C9orf131 VCP chr9 35072333 - C9orf131 chr9 35042857 + Exonic hg19 LGG TCGA-E1-5304 3 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 6957 ChimerSeq FusionScan TCGA_RNA-Seq KCNJ10-CISD2 KCNJ10 chr1 160039811 - CISD2 chr4 103806372 + Exonic hg19 LGG TCGA-E1-5304 3 5'UTR-CDS Inter-chr q23.2 q24 Seq+ 6958 ChimerSeq FusionScan TCGA_RNA-Seq ARID1B-PREP ARID1B chr6 157150555 + PREP chr6 105845802 - Exonic hg19 LGG TCGA-E1-5304 3 In-Frame Intra-chr q25.3 Oncogene q21 Seq+ 6959 ChimerSeq FusionScan TCGA_RNA-Seq PHF2-HIATL1 PHF2 chr9 96339153 + HIATL1 chr9 97200682 + Exonic hg19 LGG TCGA-E1-5304 3 Out-of-Frame Intra-chr q22.31 6960 ChimerSeq FusionScan TCGA_RNA-Seq COPZ1-PPP1R1A COPZ1 chr12 54718965 + PPP1R1A chr12 54974834 - Exonic hg19 LGG TCGA-E1-5304 2 Out-of-Frame Intra-chr q13.13 q13.2 Seq+ 6961 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD6-ZDHHC14 ANKRD6 chr6 90276815 + ZDHHC14 chr6 158049380 + Exonic hg19 LGG TCGA-E1-5304 2 Out-of-Frame Intra-chr q15 q25.3 Seq+ 6962 ChimerSeq FusionScan TCGA_RNA-Seq ABCA2-TRIM14 ABCA2 chr9 139922526 - TRIM14 chr9 100862446 - Exonic hg19 LGG TCGA-E1-5304 2 In-Frame Intra-chr q34.3 q22.33 Seq+ 6963 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-E1-5304 2 Out-of-Frame Intra-chr q22.2 q22.2 6964 ChimerSeq FusionScan TCGA_RNA-Seq ZNF790-RHPN2 ZNF790 chr19 37329238 - RHPN2 chr19 33535270 - Exonic hg19 LGG TCGA-E1-5304 2 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.11 Seq+ 6965 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-RY-A83X 3 Out-of-Frame Intra-chr q22.2 q22.2 6966 ChimerSeq FusionScan TCGA_RNA-Seq COL11A1-VKORC1L1 COL11A1 chr1 103573628 - VKORC1L1 chr7 65419060 + Exonic hg19 LGG TCGA-DU-7301 2 In-Frame Inter-chr p21.1 q11.21 6967 ChimerSeq FusionScan TCGA_RNA-Seq BAP1-DNAH1 BAP1 chr3 52439780 - DNAH1 chr3 52378505 + Exonic hg19 LGG TCGA-TQ-A7RW 3 Out-of-Frame Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 Seq+ 6968 ChimerSeq FusionScan TCGA_RNA-Seq USP3-SECISBP2L USP3 chr15 63797029 + SECISBP2L chr15 49329966 - Exonic hg19 LGG TCGA-HT-8018 2 Out-of-Frame Intra-chr q22.31 q21.1 6969 ChimerSeq FusionScan TCGA_RNA-Seq IFNGR1-PEX7 IFNGR1 chr6 137540379 - PEX7 chr6 137187764 + Exonic hg19 LGG TCGA-HT-8018 2 In-Frame Intra-chr q23.3 q23.3 Seq+ 6970 ChimerSeq FusionScan TCGA_RNA-Seq RAB21-WDR73 RAB21 chr12 72176438 + WDR73 chr15 85196033 - Exonic hg19 LGG TCGA-HT-8105 2 In-Frame Inter-chr q21.1 q25.2 6971 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-TM-A84H 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 6972 ChimerSeq FusionScan TCGA_RNA-Seq PTEN-PYGB PTEN chr10 89693008 + PYGB chr20 25249764 + Exonic hg19 LGG TCGA-FG-A87N 2 In-Frame Inter-chr q23.31 Oncogene Tumor suppressor gene p11.21 Seq+ 6973 ChimerSeq FusionScan TCGA_RNA-Seq CTDSP2-COL15A1 CTDSP2 chr12 58240154 - COL15A1 chr9 101759215 + Exonic hg19 LGG TCGA-IK-7675 5 Out-of-Frame Inter-chr q14.1 q22.33 Seq+ 6974 ChimerSeq FusionScan TCGA_RNA-Seq FOXO1-TTL FOXO1 chr13 41239719 - TTL chr13 41034543 - Exonic hg19 LGG TCGA-E1-A7YQ 2 CDS-3'UTR Intra-chr q14.11 Oncogene Tumor suppressor gene Transcription factor q14.1 6975 ChimerSeq FusionScan TCGA_RNA-Seq TMX2-CTNND1 TMX2 chr11 57480279 + CTNND1 chr11 57556508 + Exonic hg19 LGG TCGA-CS-5396 2 5'UTR-5'UTR Intra-chr q12.1 q12.1 Tumor suppressor gene 6976 ChimerSeq FusionScan TCGA_RNA-Seq SNRPN-SNURF SNRPN chr15 25131736 + SNURF chr15 25207260 + Exonic hg19 LGG TCGA-CS-5396 2 5'UTR-CDS Intra-chr q11.2 q11.2 6977 ChimerSeq FusionScan TCGA_RNA-Seq SUMF2-SEPT14 SUMF2 chr7 56146201 + SEPT14 chr7 55886916 - Exonic hg19 LGG TCGA-HW-A5KK 2 Out-of-Frame Intra-chr p11.2 p11.2 Seq+ 6978 ChimerSeq FusionScan TCGA_RNA-Seq BAI1-EXT1 BAI1 chr8 143592434 + EXT1 chr8 118834836 - Exonic hg19 LGG TCGA-HW-A5KK 2 In-Frame Intra-chr q24.11 Oncogene Tumor suppressor gene Seq+ 6979 ChimerSeq FusionScan TCGA_RNA-Seq PARD3-LYAR PARD3 chr10 35103803 - LYAR chr4 4276496 - Exonic hg19 LGG TCGA-DH-A669 10 In-Frame Inter-chr p11.21 p16.3 Seq+ 6980 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1-CPLX1 WHSC1 chr4 1920350 + CPLX1 chr4 786396 - Exonic hg19 LGG TCGA-DH-A669 6 Out-of-Frame Intra-chr Oncogene p16.3 Seq+ 6981 ChimerSeq FusionScan TCGA_RNA-Seq CCDC14-ANK3 CCDC14 chr3 123679990 - ANK3 chr10 61802517 - Exonic hg19 LGG TCGA-DH-A669 2 In-Frame Inter-chr q21.1 q21.2 6982 ChimerSeq FusionScan TCGA_RNA-Seq MAPK10-ARHGAP24 MAPK10 chr4 87275682 - ARHGAP24 chr4 86893188 + Exonic hg19 LGG TCGA-DH-A669 2 5'UTR-CDS Intra-chr q21.3 Tumor suppressor gene q21.23 Seq+ 6983 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-DH-A669 2 Out-of-Frame Intra-chr q22.2 q22.2 6984 ChimerSeq FusionScan TCGA_RNA-Seq XRCC6BP1-HIGD1C XRCC6BP1 chr12 58340859 + HIGD1C chr12 51354750 + Exonic hg19 LGG TCGA-S9-A7R2 2 Out-of-Frame Intra-chr q13.12 Seq+ 6985 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-DU-7292 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 6986 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-DU-7292 2 Out-of-Frame Intra-chr q22.2 q22.2 6987 ChimerSeq FusionScan TCGA_RNA-Seq CALM3-CCDC9 CALM3 chr19 47104694 + CCDC9 chr19 47761586 + Exonic hg19 LGG TCGA-DU-8166 3 CDS-5'UTR Intra-chr q13.32 q13.32 Seq+ 6988 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-DU-8166 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 6989 ChimerSeq FusionScan TCGA_RNA-Seq NOVA2-LEUTX NOVA2 chr19 46464267 - LEUTX chr19 40275166 + Exonic hg19 LGG TCGA-DU-8166 2 CDS-5'UTR Intra-chr q13.32 Transcription factor Seq+ 6990 ChimerSeq FusionScan TCGA_RNA-Seq SPON1-SIRT3 SPON1 chr11 14063201 + SIRT3 chr11 233215 - Exonic hg19 LGG TCGA-DU-8166 2 In-Frame Intra-chr p15.2 p15.5 Tumor suppressor gene Seq+ 6991 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT6 NDUFA11 chr19 5896463 - FUT6 chr19 5832590 - Exonic hg19 LGG TCGA-DU-8166 2 CDS-5'UTR Intra-chr p13.3 p13.3 6992 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-HW-7486 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 6993 ChimerSeq FusionScan TCGA_RNA-Seq C11orf95-NRXN2 C11orf95 chr11 63533278 - NRXN2 chr11 64402924 - Exonic hg19 LGG TCGA-DU-7018 2 In-Frame Intra-chr q13.1 Transcription factor q13.1 6994 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-DU-7018 2 Out-of-Frame Intra-chr q22.2 q22.2 6995 ChimerSeq FusionScan TCGA_RNA-Seq ZNF564-CACNA1A ZNF564 chr19 12662143 - CACNA1A chr19 13397780 - Exonic hg19 LGG TCGA-S9-A6WM 2 Out-of-Frame Intra-chr p13.2 Transcription factor p13.13 Seq+ 6996 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-TM-A84G 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 6997 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-TQ-A7RP 3 5'UTR-5'UTR Intra-chr p16.2 p16.2 6998 ChimerSeq FusionScan TCGA_RNA-Seq CTNND2-NRBP1 CTNND2 chr5 11732247 - NRBP1 chr2 27656539 + Exonic hg19 LGG TCGA-QH-A6XC 2 In-Frame Inter-chr p15.2 p23.3 Other:NRBP Tumor suppressor gene Seq+ 6999 ChimerSeq FusionScan TCGA_RNA-Seq NRBP1-DROSHA NRBP1 chr2 27651598 + DROSHA chr5 31410994 - Exonic hg19 LGG TCGA-QH-A6XC 2 5'UTR-CDS Inter-chr p23.3 Other:NRBP Tumor suppressor gene p13.3 Seq+ 7000 ChimerSeq FusionScan TCGA_RNA-Seq ACOT7-RPL22 ACOT7 chr1 6387358 - RPL22 chr1 6246876 - Exonic hg19 LGG TCGA-DU-A5TT 3 Out-of-Frame Intra-chr p36.31 p36.31 7001 ChimerSeq FusionScan TCGA_RNA-Seq CDKL3-PPP2CA CDKL3 chr5 133638280 - PPP2CA chr5 133541822 - Exonic hg19 LGG TCGA-HT-7620 2 In-Frame Intra-chr q31.1 CMGC:CDKL q31.1 Tumor suppressor gene 7002 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R2B-WWOX PPP2R2B chr5 146460621 - WWOX chr16 78420756 + Exonic hg19 LGG TCGA-HT-7620 2 5'UTR-CDS Inter-chr q32 q23.1 Tumor suppressor gene 7003 ChimerSeq FusionScan TCGA_RNA-Seq KIAA2026-CMTM7 KIAA2026 chr9 6007194 - CMTM7 chr3 32483331 + Exonic hg19 LGG TCGA-DU-7014 2 Out-of-Frame Inter-chr p24.1 p22.3 Seq+ 7004 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-DB-A4XD 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 7005 ChimerSeq FusionScan TCGA_RNA-Seq OS9-KIF5A OS9 chr12 58088709 + KIF5A chr12 57960908 + Exonic hg19 LGG TCGA-DU-7013 5 In-Frame Intra-chr q13.3 q13.3 Seq+ 7006 ChimerSeq FusionScan TCGA_RNA-Seq AVIL-MBD6 AVIL chr12 58207934 - MBD6 chr12 57921630 + Exonic hg19 LGG TCGA-DU-7013 3 Out-of-Frame Intra-chr q14.1 q13.3 Transcription factor Seq+ 7007 ChimerSeq FusionScan TCGA_RNA-Seq ZSCAN18-ATP9B ZSCAN18 chr19 58609540 - ATP9B chr18 77063603 + Exonic hg19 LGG TCGA-E1-A7YL 7 5'UTR-CDS Inter-chr q13.43 Transcription factor Seq+ 7008 ChimerSeq FusionScan TCGA_RNA-Seq ZNF583-CCDC106 ZNF583 chr19 56925809 + CCDC106 chr19 56162648 + Exonic hg19 LGG TCGA-E1-A7YL 4 In-Frame Intra-chr q13.43 Transcription factor q13.42 Seq+ 7009 ChimerSeq FusionScan TCGA_RNA-Seq ZSCAN18-ZNF837 ZSCAN18 chr19 58629714 - ZNF837 chr19 58881295 - Exonic hg19 LGG TCGA-E1-A7YL 4 CDS-5'UTR Intra-chr q13.43 Transcription factor q13.43 Transcription factor Seq+ 7010 ChimerSeq FusionScan TCGA_RNA-Seq LOH12CR1-CREBL2 LOH12CR1 chr12 12588719 + CREBL2 chr12 12788710 + Exonic hg19 LGG TCGA-E1-A7YL 2 In-Frame Intra-chr p13.1 Transcription factor 7011 ChimerSeq FusionScan TCGA_RNA-Seq ZNF460-HSPD1 ZNF460 chr19 57792204 + HSPD1 chr2 198363574 - Exonic hg19 LGG TCGA-E1-A7YL 2 CDS-5'UTR Inter-chr q13.43 Transcription factor q33.1 Tumor suppressor gene Seq+ 7012 ChimerSeq FusionScan TCGA_RNA-Seq NRD1-VPS53 NRD1 chr1 52258048 - VPS53 chr17 440416 - Exonic hg19 LGG TCGA-E1-A7YL 2 In-Frame Inter-chr Tumor suppressor gene Seq+ 7013 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-E1-A7YY 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 7014 ChimerSeq FusionScan TCGA_RNA-Seq MATR3-PAIP2 MATR3 chr5 138629494 + PAIP2 chr5 138699447 + Exonic hg19 LGG TCGA-HW-8319 2 5'UTR-5'UTR Intra-chr q31.2 q31.2 Tumor suppressor gene 7015 ChimerSeq FusionScan TCGA_RNA-Seq CDKL3-PPP2CA CDKL3 chr5 133638280 - PPP2CA chr5 133541822 - Exonic hg19 LGG TCGA-S9-A6TV 2 In-Frame Intra-chr q31.1 CMGC:CDKL q31.1 Tumor suppressor gene 7016 ChimerSeq FusionScan TCGA_RNA-Seq BTBD2-OAS2 BTBD2 chr19 1993018 - OAS2 chr12 113424842 + Exonic hg19 LGG TCGA-FG-A4MU 5 In-Frame Inter-chr p13.3 q24.13 Seq+ 7017 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-FG-A4MU 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 7018 ChimerSeq FusionScan TCGA_RNA-Seq DYM-MYL12B DYM chr18 46986767 - MYL12B chr18 3272881 + Exonic hg19 LGG TCGA-DU-6401 2 5'UTR-5'UTR Intra-chr q21.1 p11.31 7019 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-DB-A75L 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 7020 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-R8-A6ML 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 7021 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-HT-7694 3 5'UTR-5'UTR Intra-chr p16.2 p16.2 7022 ChimerSeq FusionScan TCGA_RNA-Seq HIF1A-VRK1 HIF1A chr14 62162557 + VRK1 chr14 97299803 + Exonic hg19 LGG TCGA-R8-A6MK 2 CDS-5'UTR Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q32.2 CK1:VRK Seq+ 7023 ChimerSeq FusionScan TCGA_RNA-Seq FLJ31306-KIAA0586 FLJ31306 chr14 58764672 - KIAA0586 chr14 58975272 + Exonic hg19 LGG TCGA-DU-7006 6 3'UTR-CDS Intra-chr q23.1 7024 ChimerSeq FusionScan TCGA_RNA-Seq FLJ31306-KIAA0586 FLJ31306 chr14 58764672 - KIAA0586 chr14 59014498 + Exonic hg19 LGG TCGA-DU-7006 5 3'UTR-CDS Intra-chr q23.1 7025 ChimerSeq FusionScan TCGA_RNA-Seq TIMM9-FCF1 TIMM9 chr14 58890725 - FCF1 chr14 75189974 + Exonic hg19 LGG TCGA-DU-7006 4 5'UTR-CDS Intra-chr q23.1 q24.3 Seq+ 7026 ChimerSeq FusionScan TCGA_RNA-Seq BFAR-SPNS1 BFAR chr16 14749067 + SPNS1 chr16 28994177 + Exonic hg19 LGG TCGA-DU-7006 3 In-Frame Intra-chr p11.2 Seq+ 7027 ChimerSeq FusionScan TCGA_RNA-Seq SUFU-ZCCHC24 SUFU chr10 104309863 + ZCCHC24 chr10 81154196 - Exonic hg19 LGG TCGA-DU-7006 2 Out-of-Frame Intra-chr q24.32 Oncogene Tumor suppressor gene q22.3 Seq+ 7028 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-DU-7006 2 Out-of-Frame Intra-chr q22.2 q22.2 7029 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KA2-MCHR2 RPS6KA2 chr6 167271687 - MCHR2 chr6 100404050 - Exonic hg19 LGG TCGA-DU-7006 2 CDS-5'UTR Intra-chr q27 Oncogene Tumor suppressor gene q16.2 Seq+ 7030 ChimerSeq FusionScan TCGA_RNA-Seq HTRA1-KLC1 HTRA1 chr10 124249142 + KLC1 chr14 104166991 + Exonic hg19 LGG TCGA-HT-7880 2 In-Frame Inter-chr q26.13 Tumor suppressor gene q32.33 7031 ChimerSeq FusionScan TCGA_RNA-Seq PIEZO2-SPATS2L PIEZO2 chr18 11066125 - SPATS2L chr2 201305371 + Exonic hg19 LGG TCGA-HT-7880 2 In-Frame Inter-chr p11.21 q33.1 7032 ChimerSeq FusionScan TCGA_RNA-Seq SNRPN-SNURF SNRPN chr15 25131736 + SNURF chr15 25207260 + Exonic hg19 LGG TCGA-HT-7880 2 5'UTR-CDS Intra-chr q11.2 q11.2 7033 ChimerSeq FusionScan TCGA_RNA-Seq ATP6V1B2-KHDRBS2 ATP6V1B2 chr8 20070416 + KHDRBS2 chr6 62611276 - Exonic hg19 LGG TCGA-DU-A7TC 3 In-Frame Inter-chr p21.3 q11.1 Seq+ 7034 ChimerSeq FusionScan TCGA_RNA-Seq TP53BP1-DAPK2 TP53BP1 chr15 43771594 - DAPK2 chr15 64263760 - Exonic hg19 LGG TCGA-DU-A7TC 2 In-Frame Intra-chr q15.3 Tumor suppressor gene q22.31 CAMK:DAPK Tumor suppressor gene Seq+ 7035 ChimerSeq FusionScan TCGA_RNA-Seq CEP170-RAD51B CEP170 chr1 243349080 - RAD51B chr14 68758600 + Exonic hg19 LGG TCGA-DB-5273 2 In-Frame Inter-chr q24.1 7036 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-HT-7481 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 7037 ChimerSeq FusionScan TCGA_RNA-Seq CEP170-RAD51B CEP170 chr1 243349080 - RAD51B chr14 68758600 + Exonic hg19 LGG TCGA-S9-A6U6 2 In-Frame Inter-chr q24.1 7038 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-DH-A7UT 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 7039 ChimerSeq FusionScan TCGA_RNA-Seq SCN8A-ATF1 SCN8A chr12 52184286 + ATF1 chr12 51189691 + Exonic hg19 LGG TCGA-DH-A66G 3 In-Frame Intra-chr q13.13 q13.12 Oncogene Transcription factor Seq+ 7040 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-DU-6397 2 Out-of-Frame Intra-chr q22.2 q22.2 7041 ChimerSeq FusionScan TCGA_RNA-Seq INTS4L2-KSR1 INTS4L2 chr7 65112960 + KSR1 chr17 25877593 + Exonic hg19 LGG TCGA-DU-8163 2 5'UTR-5'UTR Inter-chr q11.2 TKL:RAF 7042 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-E1-A7Z6 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 7043 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHA6-LRRN2 PLEKHA6 chr1 204328821 - LRRN2 chr1 204589346 - Exonic hg19 LGG TCGA-FG-A4MW 7 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 7044 ChimerSeq FusionScan TCGA_RNA-Seq SEC24A-KCNK7 SEC24A chr5 133984863 + KCNK7 chr11 65361345 - Exonic hg19 LGG TCGA-VM-A8CD 3 In-Frame Inter-chr q31.1 q13.1 Seq+ 7045 ChimerSeq FusionScan TCGA_RNA-Seq TULP3-C12orf57 TULP3 chr12 3018746 + C12orf57 chr12 7054933 + Exonic hg19 LGG TCGA-DU-6407 4 Out-of-Frame Intra-chr p13.33 p13.31 Seq+ 7046 ChimerSeq FusionScan TCGA_RNA-Seq ZNF528-CACNG6 ZNF528 chr19 52909286 + CACNG6 chr19 54501492 + Exonic hg19 LGG TCGA-DU-6407 3 In-Frame Intra-chr q13.41 Transcription factor q13.42 7047 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-QH-A6CZ 2 Out-of-Frame Intra-chr q22.2 q22.2 7048 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-QH-A6CZ 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 7049 ChimerSeq FusionScan TCGA_RNA-Seq SNX15-C11orf85 SNX15 chr11 64795108 + C11orf85 chr11 64708118 - Exonic hg19 LGG TCGA-HT-7686 4 Out-of-Frame Intra-chr q13.1 Seq+ 7050 ChimerSeq FusionScan TCGA_RNA-Seq HIRA-ZBTB16 HIRA chr22 19384309 - ZBTB16 chr11 114027058 + Exonic hg19 LGG TCGA-HT-7686 3 Out-of-Frame Inter-chr q11.21 Tumor suppressor gene q23.2 Tumor suppressor gene Transcription factor Seq+ 7051 ChimerSeq FusionScan TCGA_RNA-Seq PVRL3-CASK PVRL3 chr3 110845182 + CASK chrX 41469278 - Exonic hg19 LGG TCGA-HT-7686 2 In-Frame Inter-chr p11.4 CAMK:CASK 7052 ChimerSeq FusionScan TCGA_RNA-Seq TRAPPC2-ATP2B3 TRAPPC2 chrX 13737989 - ATP2B3 chrX 152845435 + Exonic hg19 LGG TCGA-TQ-A8XE 3 In-Frame Intra-chr p22.2 q28 Seq+ 7053 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-TQ-A8XE 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 7054 ChimerSeq FusionScan TCGA_RNA-Seq SMURF1-GJC3 SMURF1 chr7 98741348 - GJC3 chr7 99521226 - Exonic hg19 LGG TCGA-FG-5963 5 In-Frame Intra-chr q22.1 Seq+ 7055 ChimerSeq FusionScan TCGA_RNA-Seq GLI3-C7orf23 GLI3 chr7 42063066 - C7orf23 chr7 86828373 - Exonic hg19 LGG TCGA-FG-5963 3 In-Frame Intra-chr p14.1 Transcription factor Seq+ 7056 ChimerSeq FusionScan TCGA_RNA-Seq DMTF1-SEMA3D DMTF1 chr7 86800405 + SEMA3D chr7 84702397 - Exonic hg19 LGG TCGA-FG-5963 3 In-Frame Intra-chr q21.12 Tumor suppressor gene Transcription factor q21.11 Seq+ 7057 ChimerSeq FusionScan TCGA_RNA-Seq MPPED2-AMOTL1 MPPED2 chr11 30601792 - AMOTL1 chr11 94554695 + Exonic hg19 LGG TCGA-FG-5963 3 In-Frame Intra-chr p14.1 q21 Seq+ 7058 ChimerSeq FusionScan TCGA_RNA-Seq SMURF1-TRIM4 SMURF1 chr7 98741348 - TRIM4 chr7 99507283 - Exonic hg19 LGG TCGA-FG-5963 2 Out-of-Frame Intra-chr q22.1 Seq+ 7059 ChimerSeq FusionScan TCGA_RNA-Seq TMEM135-GPD1L TMEM135 chr11 86749228 + GPD1L chr3 32169567 + Exonic hg19 LGG TCGA-FG-5963 2 Out-of-Frame Inter-chr q14.2 p22.3 Seq+ 7060 ChimerSeq FusionScan TCGA_RNA-Seq HARBI1-TNS3 HARBI1 chr11 46637117 - TNS3 chr7 47344601 - Exonic hg19 LGG TCGA-FG-5963 2 In-Frame Inter-chr p11.2 p12.3 Seq+ 7061 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-FG-5963 2 Out-of-Frame Intra-chr q22.2 q22.2 7062 ChimerSeq FusionScan TCGA_RNA-Seq AMOTL1-CCDC88B AMOTL1 chr11 94587247 + CCDC88B chr11 64119601 + Exonic hg19 LGG TCGA-FG-5963 2 In-Frame Intra-chr q21 q13.1 Seq+ 7063 ChimerSeq FusionScan TCGA_RNA-Seq SMURF1-GJC3 SMURF1 chr7 98741348 - GJC3 chr7 99527243 - Exonic hg19 LGG TCGA-FG-5963 2 CDS-5'UTR Intra-chr q22.1 Seq+ 7064 ChimerSeq FusionScan TCGA_RNA-Seq USP46-PDGFRA USP46 chr4 53525281 - PDGFRA chr4 55140697 + Exonic hg19 LGG TCGA-CS-6665 7 Out-of-Frame Intra-chr q12 q12 Oncogene Seq+ 7065 ChimerSeq FusionScan TCGA_RNA-Seq USP46-SCFD2 USP46 chr4 53525281 - SCFD2 chr4 53752033 - Exonic hg19 LGG TCGA-CS-6665 2 In-Frame Intra-chr q12 q12 Seq+ 7066 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-HW-7493 3 5'UTR-5'UTR Intra-chr p16.2 p16.2 7067 ChimerSeq FusionScan TCGA_RNA-Seq PTPN23-MAP4 PTPN23 chr3 47437707 + MAP4 chr3 47899002 - Exonic hg19 LGG TCGA-HT-8106 2 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 7068 ChimerSeq FusionScan TCGA_RNA-Seq RAB12-FLJ42709 RAB12 chr18 8624996 + FLJ42709 chr5 92747215 - Exonic hg19 LGG TCGA-HT-A74L 2 CDS-3'UTR Inter-chr p11.22 7069 ChimerSeq FusionScan TCGA_RNA-Seq SOBP-FAM189A2 SOBP chr6 107854814 + FAM189A2 chr9 71951128 + Exonic hg19 LGG TCGA-HT-7879 2 CDS-5'UTR Inter-chr q21 q21.12 7070 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-HT-7602 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 7071 ChimerSeq FusionScan TCGA_RNA-Seq FLJ31306-PSMA3 FLJ31306 chr14 58758352 - PSMA3 chr14 58730422 + Exonic hg19 LGG TCGA-DB-5281 2 3'UTR-CDS Intra-chr q23.1 Seq+ 7072 ChimerSeq FusionScan TCGA_RNA-Seq ARNT-MRPS21 ARNT chr1 150818738 - MRPS21 chr1 150280481 + Exonic hg19 LGG TCGA-FG-8191 2 In-Frame Intra-chr q21.3 Oncogene Transcription factor q21.2 7073 ChimerSeq FusionScan TCGA_RNA-Seq MMD2-RADIL MMD2 chr7 4998601 - RADIL chr7 4917834 - Exonic hg19 LGG TCGA-TQ-A7RN 2 CDS-5'UTR Intra-chr p22.1 p22.1 7074 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-TQ-A7RN 2 Out-of-Frame Intra-chr q22.2 q22.2 7075 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-TQ-A7RK 2 Out-of-Frame Intra-chr q22.2 q22.2 7076 ChimerSeq FusionScan TCGA_RNA-Seq ASMTL-P2RY8 ASMTL chrX 1553914 - P2RY8 chrY 1535475 - Exonic hg19 LGG TCGA-S9-A7QY 2 5'UTR-5'UTR Inter-chr p22.33 p22.33 Seq+ 7077 ChimerSeq FusionScan TCGA_RNA-Seq VAX1-KIAA1598 VAX1 chr10 118895982 - KIAA1598 chr10 118808021 - Exonic hg19 LGG TCGA-HT-7475 2 CDS-5'UTR Intra-chr q25.3 Transcription factor 7078 ChimerSeq FusionScan TCGA_RNA-Seq KPNA6-PSMB2 KPNA6 chr1 32573735 + PSMB2 chr1 36102033 - Exonic hg19 LGG TCGA-HT-7475 2 In-Frame Intra-chr p35.2 p34.3 7079 ChimerSeq FusionScan TCGA_RNA-Seq BOP1-NIPAL2 BOP1 chr8 145514953 - NIPAL2 chr8 99234828 - Exonic hg19 LGG TCGA-HT-7475 2 Out-of-Frame Intra-chr q24.3 q22.2 Seq+ 7080 ChimerSeq FusionScan TCGA_RNA-Seq CLSTN3-GNAI3 CLSTN3 chr12 7283308 + GNAI3 chr1 110116358 + Exonic hg19 LGG TCGA-HT-8011 2 In-Frame Inter-chr p13.31 p13.3 7081 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-EZ-7264 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 7082 ChimerSeq FusionScan TCGA_RNA-Seq AFTPH-KIAA1841 AFTPH chr2 64751746 + KIAA1841 chr2 61343113 + Exonic hg19 LGG TCGA-DU-A7TJ 5 5'UTR-CDS Intra-chr p14 p15 Seq+ 7083 ChimerSeq FusionScan TCGA_RNA-Seq ATRX-OGT ATRX chrX 76972607 - OGT chrX 70775803 + Exonic hg19 LGG TCGA-HT-7695 2 Out-of-Frame Intra-chr q21.1 Oncogene q13.1 7084 ChimerSeq FusionScan TCGA_RNA-Seq NCK1-IL20RB NCK1 chr3 136647069 + IL20RB chr3 136708282 + Exonic hg19 LGG TCGA-HT-7695 2 In-Frame Intra-chr q22.3 q22.3 Seq+ 7085 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-HT-7688 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 7086 ChimerSeq FusionScan TCGA_RNA-Seq KHDRBS3-DECR1 KHDRBS3 chr8 136533598 + DECR1 chr8 91029351 + Exonic hg19 LGG TCGA-DB-A64X 2 In-Frame Intra-chr q24.23 q21.3 7087 ChimerSeq FusionScan TCGA_RNA-Seq CCDC127-SDHA CCDC127 chr5 216843 - SDHA chr5 233591 + Exonic hg19 LGG TCGA-S9-A6UA 3 In-Frame Intra-chr p15.33 p15.33 Oncogene Tumor suppressor gene Seq+ 7088 ChimerSeq FusionScan TCGA_RNA-Seq CCDC14-AGAP1 CCDC14 chr3 123679990 - AGAP1 chr2 236706402 + Exonic hg19 LGG TCGA-P5-A5F0 2 Out-of-Frame Inter-chr q21.1 q37.2 7089 ChimerSeq FusionScan TCGA_RNA-Seq TMX2-CTNND1 TMX2 chr11 57480279 + CTNND1 chr11 57556508 + Exonic hg19 LGG TCGA-P5-A5F0 2 5'UTR-5'UTR Intra-chr q12.1 q12.1 Tumor suppressor gene 7090 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-HT-7480 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 7091 ChimerSeq FusionScan TCGA_RNA-Seq PRKCH-MNAT1 PRKCH chr14 61789182 + MNAT1 chr14 61434946 + Exonic hg19 LGG TCGA-TQ-A7RS 2 Out-of-Frame Intra-chr q23.1 q23.1 Seq+ 7092 ChimerSeq FusionScan TCGA_RNA-Seq ZNF676-KANK3 ZNF676 chr19 22375817 - KANK3 chr19 8389980 - Exonic hg19 LGG TCGA-P5-A77X 9 In-Frame Intra-chr Transcription factor p13.2 Seq+ 7093 ChimerSeq FusionScan TCGA_RNA-Seq ZNF726-KANK3 ZNF726 chr19 24102884 + KANK3 chr19 8389980 - Exonic hg19 LGG TCGA-P5-A77X 2 In-Frame Intra-chr p12 Transcription factor p13.2 7094 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-HT-7609 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 7095 ChimerSeq FusionScan TCGA_RNA-Seq STARD7-RDX STARD7 chr2 96860695 - RDX chr11 110128638 - Exonic hg19 LGG TCGA-HT-7606 2 Out-of-Frame Inter-chr q11.2 q22.3 7096 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-DU-7300 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 7097 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-SSR1 CPSF6 chr12 69656342 + SSR1 chr6 7310262 - Exonic hg19 LGG TCGA-E1-5311 2 3'UTR-CDS Inter-chr q15 p24.3 7098 ChimerSeq FusionScan TCGA_RNA-Seq ITGB1-SNRPC ITGB1 chr10 33197295 - SNRPC chr6 34741222 + Exonic hg19 LGG TCGA-HT-A5R5 2 Out-of-Frame Inter-chr p11.22 Tumor suppressor gene p21.31 7099 ChimerSeq FusionScan TCGA_RNA-Seq NRSN1-FAM120B NRSN1 chr6 24134744 + FAM120B chr6 170704574 + Exonic hg19 LGG TCGA-HT-A5R5 2 Out-of-Frame Intra-chr p22.3 7100 ChimerSeq FusionScan TCGA_RNA-Seq REEP5-SEC22C REEP5 chr5 112256859 - SEC22C chr3 42590149 - Exonic hg19 LGG TCGA-HT-A5R5 2 Out-of-Frame Inter-chr q22.2 p22.1 7101 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-PTPRB CPSF6 chr12 69633486 + PTPRB chr12 70975082 - Exonic hg19 LGG TCGA-CS-4941 11 Out-of-Frame Intra-chr q15 q15 Seq+ 7102 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-DU-A6S2 3 In-Frame Intra-chr p13.13 p13.3 Transcription factor 7103 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-DU-A6S2 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 7104 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-HT-8114 3 5'UTR-5'UTR Intra-chr p16.2 p16.2 7105 ChimerSeq FusionScan TCGA_RNA-Seq NFIC-TPD52L2 NFIC chr19 3382241 + TPD52L2 chr20 62514071 + Exonic hg19 LGG TCGA-HT-8114 2 Out-of-Frame Inter-chr p13.3 Transcription factor q13.33 7106 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-FG-8182 2 Out-of-Frame Intra-chr q22.2 q22.2 7107 ChimerSeq FusionScan TCGA_RNA-Seq TMX2-CTNND1 TMX2 chr11 57480279 + CTNND1 chr11 57556508 + Exonic hg19 LGG TCGA-FG-8182 2 5'UTR-5'UTR Intra-chr q12.1 q12.1 Tumor suppressor gene 7108 ChimerSeq FusionScan TCGA_RNA-Seq TMEM14B-SYCP2L TMEM14B chr6 10749931 + SYCP2L chr6 10891745 + Exonic hg19 LGG TCGA-FG-A4MY 2 Out-of-Frame Intra-chr p24.2 p24.2 7109 ChimerSeq FusionScan TCGA_RNA-Seq VIPR2-SCTR VIPR2 chr7 158826903 - SCTR chr2 120199175 - Exonic hg19 LGG TCGA-DU-6404 2 Out-of-Frame Inter-chr q36.3 q14.2 7110 ChimerSeq FusionScan TCGA_RNA-Seq VIPR2-SCTR VIPR2 chr7 158826903 - SCTR chr2 120199175 - Exonic hg19 LGG TCGA-DU-A76K 2 Out-of-Frame Inter-chr q36.3 q14.2 7111 ChimerSeq FusionScan TCGA_RNA-Seq BCAT2-IRF3 BCAT2 chr19 49314240 - IRF3 chr19 50166515 - Exonic hg19 LGG TCGA-DU-7010 9 Out-of-Frame Intra-chr q13.33 q13.33 Tumor suppressor gene Transcription factor Seq+ 7112 ChimerSeq FusionScan TCGA_RNA-Seq ZNF175-CYP27B1 ZNF175 chr19 52085135 + CYP27B1 chr12 58158333 - Exonic hg19 LGG TCGA-DU-7010 5 Out-of-Frame Inter-chr q13.41 Transcription factor q14.1 Seq+ 7113 ChimerSeq FusionScan TCGA_RNA-Seq HELZ-KGFLP1 HELZ chr17 65212014 - KGFLP1 chr9 46744176 + Exonic hg19 LGG TCGA-DU-7010 4 CDS-5'UTR Inter-chr q24.2 7114 ChimerSeq FusionScan TCGA_RNA-Seq BCAT2-IRF3 BCAT2 chr19 49302931 - IRF3 chr19 50166515 - Exonic hg19 LGG TCGA-DU-7010 3 Out-of-Frame Intra-chr q13.33 q13.33 Tumor suppressor gene Transcription factor Seq+ 7115 ChimerSeq FusionScan TCGA_RNA-Seq ATG5-CDC123 ATG5 chr6 106763975 - CDC123 chr10 12259359 + Exonic hg19 LGG TCGA-DU-7010 2 In-Frame Inter-chr q21 p14 7116 ChimerSeq FusionScan TCGA_RNA-Seq BCAT2-IRF3 BCAT2 chr19 49314240 - IRF3 chr19 50166771 - Exonic hg19 LGG TCGA-DU-7010 2 In-Frame Intra-chr q13.33 q13.33 Tumor suppressor gene Transcription factor Seq+ 7117 ChimerSeq FusionScan TCGA_RNA-Seq ATAD1-LIPF ATAD1 chr10 89550066 - LIPF chr10 90427043 + Exonic hg19 LGG TCGA-E1-A7YN 3 In-Frame Intra-chr q23.31 Seq+ 7118 ChimerSeq FusionScan TCGA_RNA-Seq DTX2-TBRG4 DTX2 chr7 76093026 + TBRG4 chr7 45148886 - Exonic hg19 LGG TCGA-DU-8162 2 5'UTR-5'UTR Intra-chr p13 7119 ChimerSeq FusionScan TCGA_RNA-Seq SMURF1-GJC3 SMURF1 chr7 98741348 - GJC3 chr7 99521226 - Exonic hg19 LGG TCGA-FG-5963 3 In-Frame Intra-chr q22.1 Seq+ 7120 ChimerSeq FusionScan TCGA_RNA-Seq SOX6-PTPRJ SOX6 chr11 16362557 - PTPRJ chr11 48134298 + Exonic hg19 LGG TCGA-FG-5963 3 Out-of-Frame Intra-chr p15.2 Transcription factor p11.2 Tumor suppressor gene Seq+ 7121 ChimerSeq FusionScan TCGA_RNA-Seq NCKAP5-DYNC2H1 NCKAP5 chr2 133971287 - DYNC2H1 chr11 103306670 + Exonic hg19 LGG TCGA-FG-5963 2 In-Frame Inter-chr q21.2 q22.3 Seq+ 7122 ChimerSeq FusionScan TCGA_RNA-Seq TMEM135-GPD1L TMEM135 chr11 86749228 + GPD1L chr3 32169567 + Exonic hg19 LGG TCGA-FG-5963 2 Out-of-Frame Inter-chr q14.2 p22.3 Seq+ 7123 ChimerSeq FusionScan TCGA_RNA-Seq CELF1-ANKIB1 CELF1 chr11 47574543 - ANKIB1 chr7 91924202 + Exonic hg19 LGG TCGA-FG-5963 2 5'UTR-5'UTR Inter-chr p11.2 q21.2 7124 ChimerSeq FusionScan TCGA_RNA-Seq SMURF1-GJC3 SMURF1 chr7 98741348 - GJC3 chr7 99527243 - Exonic hg19 LGG TCGA-FG-5963 2 CDS-5'UTR Intra-chr q22.1 Seq+ 7125 ChimerSeq FusionScan TCGA_RNA-Seq PORCN-MAGED1 PORCN chrX 48370323 + MAGED1 chrX 51640642 + Exonic hg19 LGG TCGA-HT-8558 2 In-Frame Intra-chr p11.23 p11.22 7126 ChimerSeq FusionScan TCGA_RNA-Seq CEP170-RAD51B CEP170 chr1 243349080 - RAD51B chr14 68758600 + Exonic hg19 LGG TCGA-DU-6399 2 In-Frame Inter-chr q24.1 7127 ChimerSeq FusionScan TCGA_RNA-Seq AKTIP-COTL1 AKTIP chr16 53537058 - COTL1 chr16 84600561 - Exonic hg19 LGG TCGA-S9-A7R7 2 5'UTR-CDS Intra-chr q12.2 q24.1 Seq+ 7128 ChimerSeq FusionScan TCGA_RNA-Seq RBFOX2-MPPED1 RBFOX2 chr22 36334894 - MPPED1 chr22 43870615 + Exonic hg19 LGG TCGA-S9-A7R7 2 Out-of-Frame Intra-chr q13.2 Seq+ 7129 ChimerSeq FusionScan TCGA_RNA-Seq HDAC3-DIAPH1 HDAC3 chr5 141004774 - DIAPH1 chr5 140967817 - Exonic hg19 LGG TCGA-KT-A74X 2 Out-of-Frame Intra-chr q31.3 Tumor suppressor gene q31.3 7130 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-HT-7478 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 7131 ChimerSeq FusionScan TCGA_RNA-Seq PRRC2B-CAMLG PRRC2B chr9 134354006 + CAMLG chr5 134076752 + Exonic hg19 LGG TCGA-HT-7478 2 Out-of-Frame Inter-chr q34.13 q31.1 7132 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-HT-7875 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 7133 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-DB-A64U 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 7134 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-DB-A64U 2 Out-of-Frame Intra-chr q22.2 q22.2 7135 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-WY-A85E 3 Out-of-Frame Intra-chr q22.2 q22.2 7136 ChimerSeq FusionScan TCGA_RNA-Seq KDM5B-PPP1R12B KDM5B chr1 202743740 - PPP1R12B chr1 202385914 + Exonic hg19 LGG TCGA-FG-5965 2 In-Frame Intra-chr q32.1 Transcription factor q32.1 Seq+ 7137 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175388437 - Exonic hg19 LGG TCGA-FG-5965 2 5'UTR-CDS Inter-chr q21.1 q35.2 7138 ChimerSeq FusionScan TCGA_RNA-Seq SNX13-ACN9 SNX13 chr7 17979906 - ACN9 chr7 96810323 + Exonic hg19 LGG TCGA-DU-A5TR 2 In-Frame Intra-chr p21.1 7139 ChimerSeq FusionScan TCGA_RNA-Seq CDKL3-PPP2CA CDKL3 chr5 133638280 - PPP2CA chr5 133541822 - Exonic hg19 LGG TCGA-TQ-A7RI 2 In-Frame Intra-chr q31.1 CMGC:CDKL q31.1 Tumor suppressor gene 7140 ChimerSeq FusionScan TCGA_RNA-Seq ANK2-ALPK1 ANK2 chr4 113825670 + ALPK1 chr4 113350304 + Exonic hg19 LGG TCGA-HT-8104 3 In-Frame Intra-chr q25 q25 Seq+ 7141 ChimerSeq FusionScan TCGA_RNA-Seq SBF2-CALM3 SBF2 chr11 10215448 - CALM3 chr19 47109083 + Exonic hg19 LGG TCGA-HT-8104 2 In-Frame Inter-chr p15.4 q13.32 Seq+ 7142 ChimerSeq FusionScan TCGA_RNA-Seq RASSF8-SSPN RASSF8 chr12 26208379 + SSPN chr12 26377225 + Exonic hg19 LGG TCGA-HT-8104 2 Out-of-Frame Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 7143 ChimerSeq FusionScan TCGA_RNA-Seq VIPR2-SCTR VIPR2 chr7 158826903 - SCTR chr2 120199175 - Exonic hg19 LGG TCGA-DU-7008 2 Out-of-Frame Inter-chr q36.3 q14.2 7144 ChimerSeq FusionScan TCGA_RNA-Seq ZNF480-UBE2L3 ZNF480 chr19 52819215 + UBE2L3 chr22 21947149 + Exonic hg19 LGG TCGA-P5-A5EV 2 Out-of-Frame Inter-chr q13.41 Transcription factor q11.21 7145 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-S9-A7J1 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 7146 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D15-BMPER TBC1D15 chr12 72266783 + BMPER chr7 33976900 + Exonic hg19 LGG TCGA-DU-A5TY 3 In-Frame Inter-chr q21.1 p14.3 Seq+ 7147 ChimerSeq FusionScan TCGA_RNA-Seq JAZF1-SNX13 JAZF1 chr7 28220081 - SNX13 chr7 17931258 - Exonic hg19 LGG TCGA-DU-A5TY 2 Out-of-Frame Intra-chr p15.1 Transcription factor p21.1 Seq+ 7148 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-GRIP1 FRS2 chr12 69864310 + GRIP1 chr12 66800208 - Exonic hg19 LGG TCGA-DU-A5TY 2 5'UTR-CDS Intra-chr q15 q14.3 Seq+ 7149 ChimerSeq FusionScan TCGA_RNA-Seq DOT1L-TECR DOT1L chr19 2194576 + TECR chr19 14673336 + Exonic hg19 LGG TCGA-TM-A7CF 7 In-Frame Intra-chr p13.3 Oncogene Transcription factor p13.12 Seq+ 7150 ChimerSeq FusionScan TCGA_RNA-Seq VPS52-ZNF358 VPS52 chr6 33231260 - ZNF358 chr19 7584090 + Exonic hg19 LGG TCGA-TM-A7CF 5 5'UTR-5'UTR Inter-chr p13.2 Transcription factor Seq+ 7151 ChimerSeq FusionScan TCGA_RNA-Seq GNG7-LSM7 GNG7 chr19 2702643 - LSM7 chr19 2324195 - Exonic hg19 LGG TCGA-TM-A7CF 3 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 7152 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-HT-7854 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 7153 ChimerSeq FusionScan TCGA_RNA-Seq MATR3-PAIP2 MATR3 chr5 138629494 + PAIP2 chr5 138699447 + Exonic hg19 LGG TCGA-HT-7854 2 5'UTR-5'UTR Intra-chr q31.2 q31.2 Tumor suppressor gene 7154 ChimerSeq FusionScan TCGA_RNA-Seq COQ6-FLRT1 COQ6 chr14 74417198 + FLRT1 chr11 63883690 + Exonic hg19 LGG TCGA-HT-A619 2 CDS-5'UTR Inter-chr q24.3 q13.1 Seq+ 7155 ChimerSeq FusionScan TCGA_RNA-Seq ANO6-HNRNPUL1 ANO6 chr12 45610174 + HNRNPUL1 chr19 41774127 + Exonic hg19 LGG TCGA-S9-A7R3 3 In-Frame Inter-chr q12 q13.2 Seq+ 7156 ChimerSeq FusionScan TCGA_RNA-Seq TCERG1L-CNTN1 TCERG1L chr10 133106473 - CNTN1 chr12 41302158 + Exonic hg19 LGG TCGA-S9-A7R3 2 CDS-5'UTR Inter-chr q26.3 q12 Seq+ 7157 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT3 NDUFA11 chr19 5896463 - FUT3 chr19 5844862 - Exonic hg19 LGG TCGA-S9-A6TW 2 CDS-5'UTR Intra-chr p13.3 p13.3 7158 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT6 NDUFA11 chr19 5896463 - FUT6 chr19 5832590 - Exonic hg19 LGG TCGA-S9-A6TW 2 CDS-5'UTR Intra-chr p13.3 p13.3 7159 ChimerSeq FusionScan TCGA_RNA-Seq RUFY2-FERMT2 RUFY2 chr10 70161376 - FERMT2 chr14 53327183 - Exonic hg19 LGG TCGA-DB-A4XG 2 Out-of-Frame Inter-chr q21.3 q22.1 7160 ChimerSeq FusionScan TCGA_RNA-Seq ZNF532-NR3C1 ZNF532 chr18 56532811 + NR3C1 chr5 142693733 - Exonic hg19 LGG TCGA-HW-7489 2 5'UTR-CDS Inter-chr q21.32 Transcription factor q31.3 Transcription factor 7161 ChimerSeq FusionScan TCGA_RNA-Seq SOX10-FAM168A SOX10 chr22 38373873 - FAM168A chr11 73122581 - Exonic hg19 LGG TCGA-DH-5140 4 In-Frame Inter-chr q13.1 Transcription factor q13.4 Seq+ 7162 ChimerSeq FusionScan TCGA_RNA-Seq AFF2-ZBTB7A AFF2 chrX 147733640 + ZBTB7A chr19 4055245 - Exonic hg19 LGG TCGA-HT-8015 2 CDS-5'UTR Inter-chr q28 p13.3 Transcription factor 7163 ChimerSeq FusionScan TCGA_RNA-Seq TMEM108-PHACTR3 TMEM108 chr3 132764864 + PHACTR3 chr20 58381095 + Exonic hg19 LGG TCGA-HT-8564 2 5'UTR-CDS Inter-chr q22.1 q13.32 7164 ChimerSeq FusionScan TCGA_RNA-Seq TMEM150C-SCD5 TMEM150C chr4 83483058 - SCD5 chr4 83626566 - Exonic hg19 LGG TCGA-HT-8564 2 5'UTR-CDS Intra-chr q21.22 q21.22 Seq+ 7165 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-P5-A5EW 3 5'UTR-5'UTR Intra-chr p16.2 p16.2 7166 ChimerSeq FusionScan TCGA_RNA-Seq C17orf62-C1orf61 C17orf62 chr17 80408408 - C1orf61 chr1 156374393 - Exonic hg19 LGG TCGA-HW-7490 2 5'UTR-CDS Inter-chr q25.3 q22 7167 ChimerSeq FusionScan TCGA_RNA-Seq ABR-YWHAE ABR chr17 982569 - YWHAE chr17 1268352 - Exonic hg19 LGG TCGA-HT-7693 6 In-Frame Intra-chr p13.3 p13.3 Seq+ 7168 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB20-LSAMP ZBTB20 chr3 114619150 - LSAMP chr3 115571464 - Exonic hg19 LGG TCGA-E1-5307 4 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.31 Tumor suppressor gene Seq+ 7169 ChimerSeq FusionScan TCGA_RNA-Seq PAPSS2-ATAD1 PAPSS2 chr10 89475600 + ATAD1 chr10 89574369 - Exonic hg19 LGG TCGA-HT-7873 5 CDS-5'UTR Intra-chr q23.2 Seq+ 7170 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-HT-7873 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 7171 ChimerSeq FusionScan TCGA_RNA-Seq DHRSX-SYAP1 DHRSX chrY 2159542 - SYAP1 chrX 16753349 + Exonic hg19 LGG TCGA-DU-7299 3 Out-of-Frame Inter-chr p22.33 p22.2 Seq+ 7172 ChimerSeq FusionScan TCGA_RNA-Seq CD99-DHRSX CD99 chrY 2559468 + DHRSX chrY 2159644 - Exonic hg19 LGG TCGA-DU-7299 3 Out-of-Frame Intra-chr p22.33 p22.33 7173 ChimerSeq FusionScan TCGA_RNA-Seq SNRPN-SNURF SNRPN chr15 25131736 + SNURF chr15 25207260 + Exonic hg19 LGG TCGA-VW-A7QS 2 5'UTR-CDS Intra-chr q11.2 q11.2 7174 ChimerSeq FusionScan TCGA_RNA-Seq GIGYF2-NGEF GIGYF2 chr2 233684695 + NGEF chr2 233759626 - Exonic hg19 LGG TCGA-P5-A72U 4 In-Frame Intra-chr q37.1 q37.1 Seq+ 7175 ChimerSeq FusionScan TCGA_RNA-Seq MFSD2A-LAPTM5 MFSD2A chr1 40421057 + LAPTM5 chr1 31215396 - Exonic hg19 LGG TCGA-CS-6188 4 In-Frame Intra-chr p34.2 Tumor suppressor gene p35.2 Seq+ 7176 ChimerSeq FusionScan TCGA_RNA-Seq FARP1-NME1 FARP1 chr13 98865667 + NME1 chr17 49233011 + Exonic hg19 LGG TCGA-DB-5275 3 Out-of-Frame Inter-chr q32.2 q21.33 Tumor suppressor gene Seq+ 7177 ChimerSeq FusionScan TCGA_RNA-Seq FARP1-NME1 FARP1 chr13 98865667 + NME1 chr17 49237340 + Exonic hg19 LGG TCGA-DB-5275 2 In-Frame Inter-chr q32.2 q21.33 Tumor suppressor gene Seq+ 7178 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-DYNC1I1 PTPN12 chr7 77166962 + DYNC1I1 chr7 95705368 + Exonic hg19 LGG TCGA-DU-5855 8 In-Frame Intra-chr q11.23 Tumor suppressor gene q21.3 Seq+ 7179 ChimerSeq FusionScan TCGA_RNA-Seq ACTR3B-PARK7 ACTR3B chr7 152497740 + PARK7 chr1 8030953 + Exonic hg19 LGG TCGA-DU-5855 2 In-Frame Inter-chr q36.1 p36.23 Tumor suppressor gene 7180 ChimerSeq FusionScan TCGA_RNA-Seq CAMK2D-ANK2 CAMK2D chr4 114436224 - ANK2 chr4 114179205 + Exonic hg19 LGG TCGA-DU-5855 2 In-Frame Intra-chr q26 q25 Seq+ 7181 ChimerSeq FusionScan TCGA_RNA-Seq AIP-LYZL6 AIP chr11 67250728 + LYZL6 chr17 34266560 - Exonic hg19 LGG TCGA-CS-5397 3 CDS-5'UTR Inter-chr q13.2 Tumor suppressor gene q12 Seq+ 7182 ChimerSeq FusionScan TCGA_RNA-Seq RUSC2-ABAT RUSC2 chr9 35490169 + ABAT chr16 8857925 + Exonic hg19 LGG TCGA-CS-5397 2 5'UTR-CDS Inter-chr p13.3 p13.2 Seq+ 7183 ChimerSeq FusionScan TCGA_RNA-Seq PCP4L1-SDHC PCP4L1 chr1 161228773 + SDHC chr1 161293403 + Exonic hg19 LGG TCGA-S9-A6WI 2 Out-of-Frame Intra-chr q23.3 q23.3 Oncogene 7184 ChimerSeq FusionScan TCGA_RNA-Seq PCGF3-NPTXR PCGF3 chr4 724899 + NPTXR chr22 39224517 - Exonic hg19 LGG TCGA-TQ-A7RM 4 5'UTR-CDS Inter-chr p16.3 q13.1 Seq+ 7185 ChimerSeq FusionScan TCGA_RNA-Seq RGMB-CCDC112 RGMB chr5 98109910 + CCDC112 chr5 114620605 - Exonic hg19 LGG TCGA-TQ-A7RM 4 Out-of-Frame Intra-chr q15 q22.3 Seq+ 7186 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-DU-7009 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 7187 ChimerSeq FusionScan TCGA_RNA-Seq ZNF419-DYNC1LI2 ZNF419 chr19 57999351 + DYNC1LI2 chr16 66764126 - Exonic hg19 LGG TCGA-DU-5872 2 Out-of-Frame Inter-chr q13.43 Transcription factor q22.1 7188 ChimerSeq FusionScan TCGA_RNA-Seq ALDH5A1-DCDC2 ALDH5A1 chr6 24495578 + DCDC2 chr6 24178860 - Exonic hg19 LGG TCGA-DU-7015 2 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene 7189 ChimerSeq FusionScan TCGA_RNA-Seq DGKI-CSMD3 DGKI chr7 137531207 - CSMD3 chr8 113418956 - Exonic hg19 LGG TCGA-DU-7015 2 Out-of-Frame Inter-chr q33 q23.3 Oncogene Seq+ 7190 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-QH-A86X 2 Out-of-Frame Intra-chr q22.2 q22.2 7191 ChimerSeq FusionScan TCGA_RNA-Seq TMTC1-CASC1 TMTC1 chr12 29664975 - CASC1 chr12 25264873 - Exonic hg19 LGG TCGA-DU-7007 2 In-Frame Intra-chr p11.22 p12.1 Tumor suppressor gene Seq+ 7192 ChimerSeq FusionScan TCGA_RNA-Seq TMEM25-PPP1CB TMEM25 chr11 118401949 + PPP1CB chr2 29004603 + Exonic hg19 LGG TCGA-FG-7643 2 5'UTR-CDS Inter-chr q23.3 p23.2 7193 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-FG-7643 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 7194 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-HT-7690 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 7195 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-FG-6690 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 7196 ChimerSeq FusionScan TCGA_RNA-Seq C16orf7-ZNF827 C16orf7 chr16 89787170 - ZNF827 chr4 146700663 - Exonic hg19 LGG TCGA-HT-7857 2 Out-of-Frame Inter-chr q31.22 Transcription factor Seq+ 7197 ChimerSeq FusionScan TCGA_RNA-Seq RPS27A-MIR4426 RPS27A chr2 55462098 + MIR4426 chr2 55461299 + Exonic hg19 LGG TCGA-R8-A73M 2 CDS-5'UTR Intra-chr p16.1 q31.2 7198 ChimerSeq FusionScan TCGA_RNA-Seq PARD3-LYAR PARD3 chr10 35103803 - LYAR chr4 4276496 - Exonic hg19 LGG TCGA-DH-A669 5 In-Frame Inter-chr p11.21 p16.3 Seq+ 7199 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1-CPLX1 WHSC1 chr4 1920350 + CPLX1 chr4 786396 - Exonic hg19 LGG TCGA-DH-A669 2 Out-of-Frame Intra-chr Oncogene p16.3 Seq+ 7200 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-DH-A669 2 Out-of-Frame Intra-chr q22.2 q22.2 7201 ChimerSeq FusionScan TCGA_RNA-Seq RPL38-BCAS3 RPL38 chr17 72200329 + BCAS3 chr17 58979980 + Exonic hg19 LGG TCGA-HT-7479 2 Out-of-Frame Intra-chr q25.1 q23.2 Seq+ 7202 ChimerSeq FusionScan TCGA_RNA-Seq TOR1B-SPTAN1 TOR1B chr9 132566617 + SPTAN1 chr9 131329016 + Exonic hg19 LGG TCGA-HT-7479 2 CDS-5'UTR Intra-chr q34.11 q34.11 7203 ChimerSeq FusionScan TCGA_RNA-Seq KCNB1-ATP6V1E1 KCNB1 chr20 48098450 - ATP6V1E1 chr22 18083947 - Exonic hg19 LGG TCGA-HT-8113 2 In-Frame Inter-chr q13.13 q11.21 7204 ChimerSeq FusionScan TCGA_RNA-Seq VIPR2-SCTR VIPR2 chr7 158826903 - SCTR chr2 120199175 - Exonic hg19 LGG TCGA-DB-A4XA 2 Out-of-Frame Inter-chr q36.3 q14.2 7205 ChimerSeq FusionScan TCGA_RNA-Seq PRRG1-LANCL3 PRRG1 chrX 37285253 + LANCL3 chrX 37514940 + Exonic hg19 LGG TCGA-DU-8161 2 In-Frame Intra-chr p21.1 p21.1 7206 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-DB-A64O 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 7207 ChimerSeq FusionScan TCGA_RNA-Seq KCNH8-TBC1D5 KCNH8 chr3 19190287 + TBC1D5 chr3 17550097 - Exonic hg19 LGG TCGA-DU-5853 2 CDS-5'UTR Intra-chr p24.3 p24.3 7208 ChimerSeq FusionScan TCGA_RNA-Seq PHF1-IVNS1ABP PHF1 chr6 33380199 + IVNS1ABP chr1 185274775 - Exonic hg19 LGG TCGA-DU-5853 2 3'UTR-CDS Inter-chr Transcription factor q25.3 7209 ChimerSeq FusionScan TCGA_RNA-Seq RIMKLB-UPF3A RIMKLB chr12 8866637 + UPF3A chr13 115064314 + Exonic hg19 LGG TCGA-HT-7474 2 Out-of-Frame Inter-chr p13.31 q34 7210 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-S9-A7J2 4 In-Frame Intra-chr p13.13 p13.3 Transcription factor 7211 ChimerSeq FusionScan TCGA_RNA-Seq RBM4-CLASP1 RBM4 chr11 66407594 + CLASP1 chr2 122145482 - Exonic hg19 LGG TCGA-E1-A7YE 2 Out-of-Frame Inter-chr q13.2 Tumor suppressor gene q14.3 7212 ChimerSeq FusionScan TCGA_RNA-Seq MRPL21-CPT1A MRPL21 chr11 68660357 - CPT1A chr11 68582955 - Exonic hg19 LGG TCGA-FG-6691 2 CDS-5'UTR Intra-chr q13.3 q13.3 Seq+ 7213 ChimerSeq FusionScan TCGA_RNA-Seq PTGDS-HIP1R PTGDS chr9 139872144 + HIP1R chr12 123342648 + Exonic hg19 LGG TCGA-E1-A7YK 3 In-Frame Inter-chr q34.3 q24.31 Seq+ 7214 ChimerSeq FusionScan TCGA_RNA-Seq HDAC11-FBLN2 HDAC11 chr3 13525064 + FBLN2 chr3 13611814 + Exonic hg19 LGG TCGA-E1-5318 2 CDS-5'UTR Intra-chr p25.1 p25.1 7215 ChimerSeq FusionScan TCGA_RNA-Seq WNK2-CENPP WNK2 chr9 96052329 + CENPP chr9 95373595 + Exonic hg19 LGG TCGA-TQ-A7RR 2 Out-of-Frame Intra-chr q22.31 Tumor suppressor gene q22.31 Seq+ 7216 ChimerSeq FusionScan TCGA_RNA-Seq PDGFRA-FIP1L1 PDGFRA chr4 55156721 + FIP1L1 chr4 54310214 + Exonic hg19 LGG TCGA-E1-A7YI 18 In-Frame Intra-chr q12 Oncogene q12 KB Seq+ 7217 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-E1-A7YI 2 Out-of-Frame Intra-chr q22.2 q22.2 7218 ChimerSeq FusionScan TCGA_RNA-Seq FIP1L1-CHIC2 FIP1L1 chr4 54294350 + CHIC2 chr4 54880286 - Exonic hg19 LGG TCGA-E1-A7YI 2 Out-of-Frame Intra-chr q12 q12 Seq+ 7219 ChimerSeq FusionScan TCGA_RNA-Seq SUPT3H-TDRG1 SUPT3H chr6 45332937 - TDRG1 chr6 40347020 + Exonic hg19 LGG TCGA-E1-A7YI 2 5'UTR-5'UTR Intra-chr p21.1 p21.2 Tumor suppressor gene Seq+ 7220 ChimerSeq FusionScan TCGA_RNA-Seq C12orf35-MLIP C12orf35 chr12 32113805 + MLIP chr6 54095511 + Exonic hg19 LGG TCGA-E1-A7YI 2 5'UTR-CDS Inter-chr p12.1 Seq+ 7221 ChimerSeq FusionScan TCGA_RNA-Seq CDKL3-PPP2CA CDKL3 chr5 133638280 - PPP2CA chr5 133541822 - Exonic hg19 LGG TCGA-HT-8012 2 In-Frame Intra-chr q31.1 CMGC:CDKL q31.1 Tumor suppressor gene 7222 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-HT-7881 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 7223 ChimerSeq FusionScan TCGA_RNA-Seq KDM5B-UAP1 KDM5B chr1 202777229 - UAP1 chr1 162535801 + Exonic hg19 LGG TCGA-DU-6542 3 CDS-5'UTR Intra-chr q32.1 Transcription factor q23.3 Seq+ 7224 ChimerSeq FusionScan TCGA_RNA-Seq RYR2-WLS RYR2 chr1 237205869 + WLS chr1 68659910 - Exonic hg19 LGG TCGA-DU-6542 3 5'UTR-CDS Intra-chr q43 p31.3 Seq+ 7225 ChimerSeq FusionScan TCGA_RNA-Seq NEK11-BDH1 NEK11 chr3 130889731 + BDH1 chr3 197241287 - Exonic hg19 LGG TCGA-HT-A5RA 3 In-Frame Intra-chr q22.1 Other:NEK Seq+ 7226 ChimerSeq FusionScan TCGA_RNA-Seq ALG8-MAP6 ALG8 chr11 77850539 - MAP6 chr11 75299229 - Exonic hg19 LGG TCGA-FG-8181 2 In-Frame Intra-chr q14.1 q13.5 7227 ChimerSeq FusionScan TCGA_RNA-Seq MRPL21-CPT1A MRPL21 chr11 68660357 - CPT1A chr11 68582955 - Exonic hg19 LGG TCGA-DU-5871 2 CDS-5'UTR Intra-chr q13.3 q13.3 Seq+ 7228 ChimerSeq FusionScan TCGA_RNA-Seq TRIM24-AKR1D1 TRIM24 chr7 138189153 + AKR1D1 chr7 137773346 + Exonic hg19 LGG TCGA-DU-6396 4 In-Frame Intra-chr q33 Oncogene Tumor suppressor gene q33 Seq+ 7229 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175388437 - Exonic hg19 LGG TCGA-S9-A7IX 2 5'UTR-CDS Inter-chr q21.1 q35.2 7230 ChimerSeq FusionScan TCGA_RNA-Seq TAOK1-C17orf105 TAOK1 chr17 27838010 + C17orf105 chr17 41861204 + Exonic hg19 LGG TCGA-TQ-A7RJ 3 In-Frame Intra-chr q11.2 q21.31 Seq+ 7231 ChimerSeq FusionScan TCGA_RNA-Seq TAOK1-C17orf105 TAOK1 chr17 27838010 + C17orf105 chr17 41861750 + Exonic hg19 LGG TCGA-TQ-A7RJ 2 CDS-3'UTR Intra-chr q11.2 q21.31 Seq+ 7232 ChimerSeq FusionScan TCGA_RNA-Seq ZNF37A-FAM188A ZNF37A chr10 38384732 + FAM188A chr10 15838171 - Exonic hg19 LGG TCGA-DU-A6S7 2 5'UTR-CDS Intra-chr p11.1 Transcription factor Tumor suppressor gene Seq+ 7233 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-HW-7495 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 7234 ChimerSeq FusionScan TCGA_RNA-Seq NOTCH2NL-SLC24A3 NOTCH2NL chr1 145281704 + SLC24A3 chr20 19634705 + Exonic hg19 LGG TCGA-QH-A65Z 2 Out-of-Frame Inter-chr q21.1 p11.23 7235 ChimerSeq FusionScan TCGA_RNA-Seq NRCAM-PPP2CA NRCAM chr7 108039879 - PPP2CA chr5 133541822 - Exonic hg19 LGG TCGA-DU-6392 2 5'UTR-CDS Inter-chr q31.1 Tumor suppressor gene q31.1 Tumor suppressor gene 7236 ChimerSeq FusionScan TCGA_RNA-Seq RAD51AP1-ST8SIA1 RAD51AP1 chr12 4648122 + ST8SIA1 chr12 22402032 - Exonic hg19 LGG TCGA-CS-4943 5 In-Frame Intra-chr p13.32 p12.1 Seq+ 7237 ChimerSeq FusionScan TCGA_RNA-Seq TOMM70A-KCTD8 TOMM70A chr3 100119469 - KCTD8 chr4 44177267 - Exonic hg19 LGG TCGA-CS-4943 4 Out-of-Frame Inter-chr p13 Seq+ 7238 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-S9-A7J3 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 7239 ChimerSeq FusionScan TCGA_RNA-Seq NPNT-GSTCD NPNT chr4 106819158 + GSTCD chr4 106744110 + Exonic hg19 LGG TCGA-QH-A6CV 3 In-Frame Intra-chr q24 q24 Seq+ 7240 ChimerSeq FusionScan TCGA_RNA-Seq SPOP-NBPF1 SPOP chr17 47688641 - NBPF1 chr1 16890681 - Exonic hg19 LGG TCGA-QH-A6CV 2 Out-of-Frame Inter-chr q21.33 Oncogene Tumor suppressor gene p36.13 Seq+ 7241 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KA5-PHF14 RPS6KA5 chr14 91386549 - PHF14 chr7 11150976 + Exonic hg19 LGG TCGA-HT-A616 2 CDS-5'UTR Inter-chr q32.11 p21.3 7242 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-P5-A733 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 7243 ChimerSeq FusionScan TCGA_RNA-Seq SNRPN-CYFIP1 SNRPN chr15 25101863 + CYFIP1 chr15 22939174 + Exonic hg19 LGG TCGA-KT-A7W1 3 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 7244 ChimerSeq FusionScan TCGA_RNA-Seq KIF26B-FMN2 KIF26B chr1 245852109 + FMN2 chr1 240286478 + Exonic hg19 LGG TCGA-KT-A7W1 2 In-Frame Intra-chr q43 Seq+ 7245 ChimerSeq FusionScan TCGA_RNA-Seq FMN2-SMYD3 FMN2 chr1 240341368 + SMYD3 chr1 245927451 - Exonic hg19 LGG TCGA-KT-A7W1 2 Out-of-Frame Intra-chr q43 q44 Transcription factor 7246 ChimerSeq FusionScan TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55268106 + SEPT14 chr7 55863785 - Exonic hg19 LGG TCGA-DU-6406 3 In-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 7247 ChimerSeq FusionScan TCGA_RNA-Seq SF1-GNAS SF1 chr11 64543969 - GNAS chr20 57470666 + Exonic hg19 LGG TCGA-DU-6406 2 In-Frame Inter-chr q13.1 q13.32 Oncogene Seq+ 7248 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-HW-7491 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 7249 ChimerSeq FusionScan TCGA_RNA-Seq CCT7-SMARCB1 CCT7 chr2 73461512 + SMARCB1 chr22 24175758 + Exonic hg19 LGG TCGA-DU-A5TS 2 Out-of-Frame Inter-chr p13.2 q11.23 Oncogene Tumor suppressor gene 7250 ChimerSeq FusionScan TCGA_RNA-Seq GRIA4-NAALAD2 GRIA4 chr11 105732934 + NAALAD2 chr11 89906991 + Exonic hg19 LGG TCGA-DB-5277 6 In-Frame Intra-chr q22.3 q14.3 Seq+ 7251 ChimerSeq FusionScan TCGA_RNA-Seq IGDCC3-GLDN IGDCC3 chr15 65667434 - GLDN chr15 51675981 + Exonic hg19 LGG TCGA-DB-5277 3 In-Frame Intra-chr q22.31 q21.2 Seq+ 7252 ChimerSeq FusionScan TCGA_RNA-Seq CEP170-RAD51B CEP170 chr1 243349080 - RAD51B chr14 68758600 + Exonic hg19 LGG TCGA-FG-A711 2 In-Frame Inter-chr q24.1 7253 ChimerSeq FusionScan TCGA_RNA-Seq RASA3-KCNG2 RASA3 chr13 114817526 - KCNG2 chr18 77659039 + Exonic hg19 LGG TCGA-FG-A711 2 Out-of-Frame Inter-chr q23 Seq+ 7254 ChimerSeq FusionScan TCGA_RNA-Seq EI24-FEZ1 EI24 chr11 125442465 + FEZ1 chr11 125359718 - Exonic hg19 LGG TCGA-E1-A7YW 2 CDS-5'UTR Intra-chr q24.2 Tumor suppressor gene q24.2 Tumor suppressor gene Seq+ 7255 ChimerSeq FusionScan TCGA_RNA-Seq PICALM-PPME1 PICALM chr11 85779692 - PPME1 chr11 73914772 + Exonic hg19 LGG TCGA-DU-A7T6 2 Out-of-Frame Intra-chr q14.2 q13.4 Seq+ 7256 ChimerSeq FusionScan TCGA_RNA-Seq CORO1C-ZNF664 CORO1C chr12 109125204 - ZNF664 chr12 124495927 + Exonic hg19 LGG TCGA-HW-A5KL 2 5'UTR-5'UTR Intra-chr q24.11 q24.31 Transcription factor Seq+ 7257 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT6 NDUFA11 chr19 5896463 - FUT6 chr19 5832590 - Exonic hg19 LGG TCGA-E1-5305 2 CDS-5'UTR Intra-chr p13.3 p13.3 7258 ChimerSeq FusionScan TCGA_RNA-Seq C20orf194-PON2 C20orf194 chr20 3354694 - PON2 chr7 95041789 - Exonic hg19 LGG TCGA-E1-5302 2 In-Frame Inter-chr p13 q21.3 7259 ChimerSeq FusionScan TCGA_RNA-Seq SCD-SEC61A2 SCD chr10 102116521 + SEC61A2 chr10 12191593 + Exonic hg19 LGG TCGA-TM-A84J 12 In-Frame Intra-chr q24.31 p14 Seq+ 7260 ChimerSeq FusionScan TCGA_RNA-Seq PDGFB-DGCR2 PDGFB chr22 39626088 - DGCR2 chr22 19077003 - Exonic hg19 LGG TCGA-TM-A84J 9 In-Frame Intra-chr q13.1 Oncogene q11.21 Seq+ 7261 ChimerSeq FusionScan TCGA_RNA-Seq ZNF239-SEC31B ZNF239 chr10 44063346 - SEC31B chr10 102257037 - Exonic hg19 LGG TCGA-TM-A84J 7 5'UTR-CDS Intra-chr q11.21 Transcription factor q24.31 Seq+ 7262 ChimerSeq FusionScan TCGA_RNA-Seq EPHB2-NTRK1 EPHB2 chr1 23111569 + NTRK1 chr1 156843424 + Exonic hg19 LGG TCGA-TM-A84J 5 In-Frame Intra-chr p36.12 Tumor suppressor gene q23.1 Oncogene Seq+ 7263 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB40-PRCC ZBTB40 chr1 22778497 + PRCC chr1 156752073 + Exonic hg19 LGG TCGA-TM-A84J 4 5'UTR-CDS Intra-chr p36.12 Transcription factor q23.1 Seq+ 7264 ChimerSeq FusionScan TCGA_RNA-Seq CWF19L1-HSPA12A CWF19L1 chr10 102027327 - HSPA12A chr10 118466796 - Exonic hg19 LGG TCGA-TM-A84J 3 Out-of-Frame Intra-chr q24.31 q25.3 Seq+ 7265 ChimerSeq FusionScan TCGA_RNA-Seq PDGFB-DGCR2 PDGFB chr22 39626088 - DGCR2 chr22 19055738 - Exonic hg19 LGG TCGA-TM-A84J 2 In-Frame Intra-chr q13.1 Oncogene q11.21 Seq+ 7266 ChimerSeq FusionScan TCGA_RNA-Seq NPTXR-PDXP NPTXR chr22 39239239 - PDXP chr22 38061561 + Exonic hg19 LGG TCGA-TM-A84J 2 Out-of-Frame Intra-chr q13.1 q13.1 Seq+ 7267 ChimerSeq FusionScan TCGA_RNA-Seq LUZP1-SORL1 LUZP1 chr1 23495258 - SORL1 chr11 121340715 + Exonic hg19 LGG TCGA-TM-A84J 2 5'UTR-CDS Inter-chr p36.12 q24.1 Seq+ 7268 ChimerSeq FusionScan TCGA_RNA-Seq SLC19A3-KTN1 SLC19A3 chr2 228582658 - KTN1 chr14 56094629 + Exonic hg19 LGG TCGA-CS-4944 2 5'UTR-CDS Inter-chr q36.3 q22.3 7269 ChimerSeq FusionScan TCGA_RNA-Seq MARCH1-ADCK2 2019_ 3_ 1_ chr4 165304338 - ADCK2 chr7 140374410 + Exonic hg19 LGG TCGA-CS-4944 2 5'UTR-CDS Inter-chr q32.3 q34 Atypical:ABC1 7270 ChimerSeq FusionScan TCGA_RNA-Seq CLCN7-MLST8 CLCN7 chr16 1510816 - MLST8 chr16 2256358 + Exonic hg19 LGG TCGA-CS-4944 2 Out-of-Frame Intra-chr p13.3 p13.3 7271 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-FG-5962 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 7272 ChimerSeq FusionScan TCGA_RNA-Seq MFSD11-THAP10 MFSD11 chr17 74735075 + THAP10 chr15 71175247 - Exonic hg19 LGG TCGA-FG-5962 2 Out-of-Frame Inter-chr q25.1 q23 Transcription factor 7273 ChimerSeq FusionScan TCGA_RNA-Seq SNRPN-SNURF SNRPN chr15 25068970 + SNURF chr15 25207260 + Exonic hg19 LGG TCGA-DU-7019 2 5'UTR-CDS Intra-chr q11.2 q11.2 7274 ChimerSeq FusionScan TCGA_RNA-Seq SMAD5-COL5A1 SMAD5 chr5 135468651 + COL5A1 chr9 137591754 + Exonic hg19 LGG TCGA-WY-A859 2 5'UTR-CDS Inter-chr q31.1 Transcription factor q34.3 Seq+ 7275 ChimerSeq FusionScan TCGA_RNA-Seq MMP17-NOC4L MMP17 chr12 132313198 + NOC4L chr12 132635802 + Exonic hg19 LGG TCGA-WY-A859 2 Out-of-Frame Intra-chr q24.33 q24.33 Seq+ 7276 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-QH-A6CS 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 7277 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-DU-5870 2 Out-of-Frame Intra-chr q22.2 q22.2 7278 ChimerSeq FusionScan TCGA_RNA-Seq ZNRF3-CRYBB2 ZNRF3 chr22 29280054 + CRYBB2 chr22 25617370 + Exonic hg19 LGG TCGA-HT-A74H 3 CDS-5'UTR Intra-chr q12.1 q11.23 Seq+ 7279 ChimerSeq FusionScan TCGA_RNA-Seq NFASC-ATP2B4 NFASC chr1 204797910 + ATP2B4 chr1 203667284 + Exonic hg19 LGG TCGA-DU-A7TD 12 5'UTR-CDS Intra-chr q32.1 q32.1 Seq+ 7280 ChimerSeq FusionScan TCGA_RNA-Seq ZFYVE1-DENND4A ZFYVE1 chr14 73459850 - DENND4A chr15 65998562 - Exonic hg19 LGG TCGA-DU-A7TD 2 In-Frame Inter-chr q24.2 q22.31 Seq+ 7281 ChimerSeq FusionScan TCGA_RNA-Seq PTPRZ1-TSPAN3 PTPRZ1 chr7 121513611 + TSPAN3 chr15 77348597 - Exonic hg19 LGG TCGA-DU-A7TD 2 Out-of-Frame Inter-chr q31.32 q24.3 7282 ChimerSeq FusionScan TCGA_RNA-Seq SMARCAD1-GRID2 SMARCAD1 chr4 95174158 + GRID2 chr4 94547419 + Exonic hg19 LGG TCGA-DU-A7TD 2 In-Frame Intra-chr q22.3 q22.1 Seq+ 7283 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-CS-6666 2 Out-of-Frame Intra-chr q22.2 q22.2 7284 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-TQ-A7RO 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 7285 ChimerSeq FusionScan TCGA_RNA-Seq CDKL3-PPP2CA CDKL3 chr5 133638280 - PPP2CA chr5 133541822 - Exonic hg19 LGG TCGA-DU-6394 2 In-Frame Intra-chr q31.1 CMGC:CDKL q31.1 Tumor suppressor gene 7286 ChimerSeq FusionScan TCGA_RNA-Seq AFAP1-NTRK2 AFAP1 chr4 7780488 - NTRK2 chr9 87356806 + Exonic hg19 LGG TCGA-HT-7680 2 In-Frame Inter-chr p16.1 q21.33 Oncogene Seq+ 7287 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-HT-7680 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 7288 ChimerSeq FusionScan TCGA_RNA-Seq CDKL3-PPP2CA CDKL3 chr5 133638280 - PPP2CA chr5 133541822 - Exonic hg19 LGG TCGA-HT-7476 2 In-Frame Intra-chr q31.1 CMGC:CDKL q31.1 Tumor suppressor gene 7289 ChimerSeq FusionScan TCGA_RNA-Seq PKD1-RELB PKD1 chr16 2163161 - RELB chr19 45525310 + Exonic hg19 LGG TCGA-HT-8110 2 In-Frame Inter-chr p13.3 CAMK:PKD Tumor suppressor gene q13.32 Transcription factor 7290 ChimerSeq FusionScan TCGA_RNA-Seq TRA2A-CBL TRA2A chr7 23571407 - CBL chr11 119142444 + Exonic hg19 LGG TCGA-HT-8110 2 Out-of-Frame Inter-chr p15.3 q23.3 Oncogene Tumor suppressor gene 7291 ChimerSeq FusionScan TCGA_RNA-Seq SFPQ-FAM134B SFPQ chr1 35654603 - FAM134B chr5 16572211 - Exonic hg19 LGG TCGA-HT-8110 2 In-Frame Inter-chr p34.3 7292 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-DU-8164 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 7293 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-DU-8164 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 7294 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-QH-A6X8 3 In-Frame Intra-chr p13.13 p13.3 Transcription factor 7295 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1211-SCFD2 KIAA1211 chr4 57045596 + SCFD2 chr4 53773758 - Exonic hg19 LGG TCGA-HT-A5R7 4 5'UTR-CDS Intra-chr q12 q12 Seq+ 7296 ChimerSeq FusionScan TCGA_RNA-Seq CCDC14-STXBP5 CCDC14 chr3 123679990 - STXBP5 chr6 147674458 + Exonic hg19 LGG TCGA-HT-A5R7 2 Out-of-Frame Inter-chr q21.1 q24.3 7297 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-HT-A5R7 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 7298 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1211-SCFD2 KIAA1211 chr4 57045596 + SCFD2 chr4 53752033 - Exonic hg19 LGG TCGA-HT-A5R7 2 5'UTR-CDS Intra-chr q12 q12 Seq+ 7299 ChimerSeq FusionScan TCGA_RNA-Seq MATR3-ARL6IP6 MATR3 chr5 138629494 + ARL6IP6 chr2 153577046 + Exonic hg19 LGG TCGA-DB-5280 2 5'UTR-5'UTR Inter-chr q31.2 q23.3 7300 ChimerSeq FusionScan TCGA_RNA-Seq TIA1-C6orf48 TIA1 chr2 70456190 - C6orf48 chr6 31805012 + Exonic hg19 LGG TCGA-HT-7676 2 CDS-3'UTR Inter-chr p13.3 7301 ChimerSeq FusionScan TCGA_RNA-Seq EP300-BCOR EP300 chr22 41572532 + BCOR chrX 39930412 - Exonic hg19 LGG TCGA-DU-6404 4 In-Frame Inter-chr q13.2 Oncogene p11.4 Oncogene Seq+ 7302 ChimerSeq FusionScan TCGA_RNA-Seq EP300-BCOR EP300 chr22 41572532 + BCOR chrX 39930943 - Exonic hg19 LGG TCGA-DU-6404 3 In-Frame Inter-chr q13.2 Oncogene p11.4 Oncogene Seq+ 7303 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-DU-6404 2 Out-of-Frame Intra-chr q22.2 q22.2 7304 ChimerSeq FusionScan TCGA_RNA-Seq ZNF136-NFIC ZNF136 chr19 12274021 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-HT-7604 5 In-Frame Intra-chr p13.2 Transcription factor p13.3 Transcription factor 7305 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-HT-7604 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 7306 ChimerSeq FusionScan TCGA_RNA-Seq INTS4L2-KSR1 INTS4L2 chr7 65112960 + KSR1 chr17 25877593 + Exonic hg19 LGG TCGA-HT-7860 2 5'UTR-5'UTR Inter-chr q11.2 TKL:RAF 7307 ChimerSeq FusionScan TCGA_RNA-Seq MED13L-MYBPC1 MED13L chr12 116444110 - MYBPC1 chr12 102061509 + Exonic hg19 LGG TCGA-E1-5303 4 In-Frame Intra-chr q24.21 q23.2 Seq+ 7308 ChimerSeq FusionScan TCGA_RNA-Seq HPS3-SLC1A3 HPS3 chr3 148847727 + SLC1A3 chr5 36671130 + Exonic hg19 LGG TCGA-E1-5303 2 In-Frame Inter-chr q24 p13.2 7309 ChimerSeq FusionScan TCGA_RNA-Seq GLG1-HMGXB3 GLG1 chr16 74508443 - HMGXB3 chr5 149431287 + Exonic hg19 LGG TCGA-DU-8168 2 In-Frame Inter-chr q23.1 q32 7310 ChimerSeq FusionScan TCGA_RNA-Seq RIMKLB-PIP4K2A RIMKLB chr12 8850893 + PIP4K2A chr10 22898646 - Exonic hg19 LGG TCGA-FG-8185 2 5'UTR-CDS Inter-chr p13.31 p12.2 Seq+ 7311 ChimerSeq FusionScan TCGA_RNA-Seq SUZ12-LRRC37A2 SUZ12 chr17 30303633 + LRRC37A2 chr17 44623620 + Exonic hg19 LGG TCGA-DU-5874 2 CDS-5'UTR Intra-chr q11.2 Tumor suppressor gene 7312 ChimerSeq FusionScan TCGA_RNA-Seq SUZ12-LRRC37A SUZ12 chr17 30303633 + LRRC37A chr17 44405757 + Exonic hg19 LGG TCGA-DU-5874 2 CDS-5'UTR Intra-chr q11.2 Tumor suppressor gene 7313 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-HW-8322 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 7314 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-QH-A6X5 2 Out-of-Frame Intra-chr q22.2 q22.2 7315 ChimerSeq FusionScan TCGA_RNA-Seq RORA-CLSTN2 RORA chr15 61521251 - CLSTN2 chr3 139894792 + Exonic hg19 LGG TCGA-DB-5278 3 In-Frame Inter-chr q22.2 Transcription factor q23 Seq+ 7316 ChimerSeq FusionScan TCGA_RNA-Seq PPM1K-SHB PPM1K chr4 89205557 - SHB chr9 37974834 - Exonic hg19 LGG TCGA-DB-5278 2 5'UTR-CDS Inter-chr q22.1 p13.1 7317 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-QH-A65R 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 7318 ChimerSeq FusionScan TCGA_RNA-Seq TSFM-CYP27B1 TSFM chr12 58180945 + CYP27B1 chr12 58159980 - Exonic hg19 LGG TCGA-E1-A7YD 4 In-Frame Intra-chr q14.1 q14.1 Seq+ 7319 ChimerSeq FusionScan TCGA_RNA-Seq OS9-MARCH9 OS9 chr12 58090156 + 2019_ 3_ 9_ chr12 58150711 + Exonic hg19 LGG TCGA-E1-A7YD 2 In-Frame Intra-chr q13.3 q14.1 7320 ChimerSeq FusionScan TCGA_RNA-Seq ZC3H11A-FIP1L1 ZC3H11A chr1 203787817 + FIP1L1 chr4 54292038 + Exonic hg19 LGG TCGA-E1-A7YD 2 Out-of-Frame Inter-chr q32.1 q12 Seq+ 7321 ChimerSeq FusionScan TCGA_RNA-Seq METTL21B-GLI1 METTL21B chr12 58166911 + GLI1 chr12 57858455 + Exonic hg19 LGG TCGA-TM-A84B 10 In-Frame Intra-chr q13.3 Tumor suppressor gene Transcription factor Seq+ 7322 ChimerSeq FusionScan TCGA_RNA-Seq ADCYAP1R1-AQP1 ADCYAP1R1 chr7 31092293 + AQP1 chr7 30961680 + Exonic hg19 LGG TCGA-TM-A84B 7 5'UTR-CDS Intra-chr p14.3 p14.3 Seq+ 7323 ChimerSeq FusionScan TCGA_RNA-Seq METTL21B-GLI1 METTL21B chr12 58166911 + GLI1 chr12 57857447 + Exonic hg19 LGG TCGA-TM-A84B 7 CDS-5'UTR Intra-chr q13.3 Tumor suppressor gene Transcription factor Seq+ 7324 ChimerSeq FusionScan TCGA_RNA-Seq FGFR3-FBXO28 FGFR3 chr4 1808661 + FBXO28 chr1 224340843 + Exonic hg19 LGG TCGA-TM-A84B 7 In-Frame Inter-chr p16.3 TK:FGFR Oncogene q42.11 Seq+ 7325 ChimerSeq FusionScan TCGA_RNA-Seq ADCYAP1R1-AQP1 ADCYAP1R1 chr7 31092293 + AQP1 chr7 30961295 + Exonic hg19 LGG TCGA-TM-A84B 5 5'UTR-5'UTR Intra-chr p14.3 p14.3 Seq+ 7326 ChimerSeq FusionScan TCGA_RNA-Seq ZNF345-LGALS13 ZNF345 chr19 37342806 + LGALS13 chr19 40095817 + Exonic hg19 LGG TCGA-TM-A84B 5 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.2 Seq+ 7327 ChimerSeq FusionScan TCGA_RNA-Seq ZNF345-LGALS13 ZNF345 chr19 37342806 + LGALS13 chr19 40097862 + Exonic hg19 LGG TCGA-TM-A84B 3 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.2 Seq+ 7328 ChimerSeq FusionScan TCGA_RNA-Seq METTL21B-GLI1 METTL21B chr12 58168550 + GLI1 chr12 57857447 + Exonic hg19 LGG TCGA-TM-A84B 2 CDS-5'UTR Intra-chr q13.3 Tumor suppressor gene Transcription factor Seq+ 7329 ChimerSeq FusionScan TCGA_RNA-Seq RFX7-TBC1D2B RFX7 chr15 56535322 - TBC1D2B chr15 78322512 - Exonic hg19 LGG TCGA-TM-A84B 2 In-Frame Intra-chr q21.3 Transcription factor q25.1 7330 ChimerSeq FusionScan TCGA_RNA-Seq REV3L-PDE10A REV3L chr6 111803952 - PDE10A chr6 165832265 - Exonic hg19 LGG TCGA-TM-A84B 2 Out-of-Frame Intra-chr q21 q27 7331 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-TM-A84B 2 Out-of-Frame Intra-chr q22.2 q22.2 7332 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHO2-TRIP4 PLEKHO2 chr15 65153774 + TRIP4 chr15 64737204 + Exonic hg19 LGG TCGA-TM-A84B 2 In-Frame Intra-chr q22.31 q22.31 Seq+ 7333 ChimerSeq FusionScan TCGA_RNA-Seq CDKL3-PPP2CA CDKL3 chr5 133638280 - PPP2CA chr5 133541822 - Exonic hg19 LGG TCGA-S9-A7R4 2 In-Frame Intra-chr q31.1 CMGC:CDKL q31.1 Tumor suppressor gene 7334 ChimerSeq FusionScan TCGA_RNA-Seq NRD1-KIF5A NRD1 chr1 52305897 - KIF5A chr12 57957221 + Exonic hg19 LGG TCGA-HT-A61A 2 In-Frame Inter-chr q13.3 7335 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-HT-8010 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 7336 ChimerSeq FusionScan TCGA_RNA-Seq TTYH3-NOC4L TTYH3 chr7 2671912 + NOC4L chr12 132635525 + Exonic hg19 LGG TCGA-CS-4938 2 Out-of-Frame Inter-chr p22.3 q24.33 Seq+ 7337 ChimerSeq FusionScan TCGA_RNA-Seq NCK1-IL20RB NCK1 chr3 136647069 + IL20RB chr3 136708282 + Exonic hg19 LGG TCGA-CS-4938 2 In-Frame Intra-chr q22.3 q22.3 Seq+ 7338 ChimerSeq FusionScan TCGA_RNA-Seq NDUFS7-CNN2 NDUFS7 chr19 1383941 + CNN2 chr19 1031069 + Exonic hg19 LGG TCGA-DU-7306 3 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 7339 ChimerSeq FusionScan TCGA_RNA-Seq DLGAP1-TGIF1 DLGAP1 chr18 4455005 - TGIF1 chr18 3456351 + Exonic hg19 LGG TCGA-DU-7306 2 5'UTR-5'UTR Intra-chr p11.31 p11.31 Transcription factor Seq+ 7340 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-DU-7306 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 7341 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-DU-7306 2 5'UTR-5'UTR Intra-chr p16.2 p16.2 7342 ChimerSeq FusionScan TCGA_RNA-Seq TTLL5-IFT43 TTLL5 chr14 76330205 + IFT43 chr14 76455227 + Exonic hg19 LGG TCGA-DU-7306 2 In-Frame Intra-chr q24.3 q24.3 Seq+ 7343 ChimerSeq FusionScan TCGA_RNA-Seq PTPRZ1-MET PTPRZ1 chr7 121513611 + MET chr7 116339124 + Exonic hg19 LGG TCGA-DU-6407 7 CDS-5'UTR Intra-chr q31.32 q31.2 TK:Met Oncogene Pub Seq+ 7344 ChimerSeq FusionScan TCGA_RNA-Seq PTPRZ1-MET PTPRZ1 chr7 121513611 + MET chr7 116371721 + Exonic hg19 LGG TCGA-DU-6407 4 Out-of-Frame Intra-chr q31.32 q31.2 TK:Met Oncogene Pub Seq+ 7345 ChimerSeq FusionScan TCGA_RNA-Seq LUC7L-AXIN1 LUC7L chr16 270647 - AXIN1 chr16 364683 - Exonic hg19 LGG TCGA-DU-6407 4 Out-of-Frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Seq+ 7346 ChimerSeq FusionScan TCGA_RNA-Seq KIF5B-SVIL KIF5B chr10 32337391 - SVIL chr10 29975580 - Exonic hg19 LGG TCGA-DU-6407 3 CDS-5'UTR Intra-chr p11.22 p11.23 Seq+ 7347 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-DU-6407 3 Out-of-Frame Intra-chr q22.2 q22.2 7348 ChimerSeq FusionScan TCGA_RNA-Seq FAM49A-VSNL1 FAM49A chr2 16847047 - VSNL1 chr2 17773336 + Exonic hg19 LGG TCGA-DU-6407 3 5'UTR-5'UTR Intra-chr p24.2 p24.2 Tumor suppressor gene 7349 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-TM-A84S 2 Out-of-Frame Intra-chr q22.2 q22.2 7350 ChimerSeq FusionScan TCGA_RNA-Seq ATAD1-PAPSS2 ATAD1 chr10 89574194 - PAPSS2 chr10 89468952 + Exonic hg19 LGG TCGA-FG-A70Z 2 In-Frame Intra-chr q23.2 Seq+ 7351 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LGG TCGA-FG-A70Z 2 Out-of-Frame Intra-chr q22.2 q22.2 7352 ChimerSeq FusionScan TCGA_RNA-Seq PTEN-ATAD1 PTEN chr10 89653866 + ATAD1 chr10 89550187 - Exonic hg19 LGG TCGA-FG-A70Z 2 Out-of-Frame Intra-chr q23.31 Oncogene Tumor suppressor gene Seq+ 7353 ChimerSeq FusionScan TCGA_RNA-Seq GPR75-ASB3 GPR75 chr2 54086964 - ASB3 chr2 53978078 - Exonic hg19 LGG TCGA-CS-5393 3 5'UTR-5'UTR Intra-chr p16.2 p16.2 7354 ChimerSeq FusionScan TCGA_RNA-Seq DAND5-NFIC DAND5 chr19 13080798 + NFIC chr19 3381709 + Exonic hg19 LGG TCGA-CS-5393 2 In-Frame Intra-chr p13.13 p13.3 Transcription factor 7355 ChimerSeq FusionScan TCGA_RNA-Seq DENND1A-ASTN2 DENND1A chr9 126319848 - ASTN2 chr9 119188367 - Exonic hg19 LGG TCGA-DH-A66B 3 Out-of-Frame Intra-chr q33.3 q33.1 Seq+ 7356 ChimerSeq FusionScan TCGA_RNA-Seq CEP170-RAD51B CEP170 chr1 243349080 - RAD51B chr14 68758600 + Exonic hg19 LGG TCGA-DU-A7TI 3 In-Frame Inter-chr q24.1 7357 ChimerSeq FusionScan TCGA_RNA-Seq ACBD5-YME1L1 ACBD5 chr10 27493368 - YME1L1 chr10 27437969 - Exonic hg19 LGG TCGA-DU-A7TI 2 Out-of-Frame Intra-chr p12.1 p12.1 7358 ChimerSeq FusionScan TCGA_RNA-Seq PNKP-CDK5RAP3 PNKP chr19 50369655 - CDK5RAP3 chr17 46054077 + Exonic hg19 LGG TCGA-FG-6692 2 In-Frame Inter-chr q13.33 q21.32 7359 ChimerSeq FusionScan TCGA_RNA-Seq CDKL3-PPP2CA CDKL3 chr5 133638280 - PPP2CA chr5 133541822 - Exonic hg19 LGG TCGA-DB-A64L 3 In-Frame Intra-chr q31.1 CMGC:CDKL q31.1 Tumor suppressor gene 7360 ChimerSeq FusionScan TCGA_RNA-Seq PBRM1-KYNU PBRM1 chr3 52692214 - KYNU chr2 143742652 + Exonic hg19 LGG TCGA-HT-7477 4 In-Frame Inter-chr p21.1 Oncogene Tumor suppressor gene q22.2 Seq+ 7361 ChimerSeq FusionScan TCGA_RNA-Seq ZNF804A-IRF2 ZNF804A chr2 185463797 + IRF2 chr4 185350224 - Exonic hg19 LGG TCGA-HT-7477 3 CDS-5'UTR Inter-chr q32.1 Transcription factor q35.1 Transcription factor Seq+ 7362 ChimerSeq FusionScan TCGA_RNA-Seq MIER3-PDE4D MIER3 chr5 56246454 - PDE4D chr5 58489362 - Exonic hg19 LGG TCGA-HT-7477 2 Out-of-Frame Intra-chr q11.2 q12.1 Seq+ 7363 ChimerSeq FusionScan TCGA_RNA-Seq DOT1L-TECR DOT1L chr19 2194576 + TECR chr19 14673336 + Exonic hg19 LGG TCGA-TM-A7CF 4 In-Frame Intra-chr p13.3 Oncogene Transcription factor p13.12 Seq+ 7364 ChimerSeq FusionScan TCGA_RNA-Seq RANBP3-ALDH16A1 RANBP3 chr19 5978071 - ALDH16A1 chr19 49961742 + Exonic hg19 LGG TCGA-TM-A7CF 3 Out-of-Frame Intra-chr p13.3 q13.33 Seq+ 7365 ChimerSeq FusionScan TCGA_RNA-Seq VPS52-ZNF358 VPS52 chr6 33231260 - ZNF358 chr19 7584090 + Exonic hg19 LGG TCGA-TM-A7CF 2 5'UTR-5'UTR Inter-chr p13.2 Transcription factor Seq+ 7366 ChimerSeq FusionScan TCGA_RNA-Seq GLT25D1-COPE GLT25D1 chr19 17671274 + COPE chr19 19021880 - Exonic hg19 LGG TCGA-TM-A7CF 2 In-Frame Intra-chr p13.11 Seq+ 7367 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS6-PPP6R3 TMPRSS6 chr22 37499255 - PPP6R3 chr11 68377371 + Exonic hg19 LIHC TCGA-2Y-A9GT 7 Out-of-Frame Inter-chr q12.3 Tumor suppressor gene q13.2 Seq+ 7368 ChimerSeq FusionScan TCGA_RNA-Seq EHBP1-COMMD1 EHBP1 chr2 63223901 + COMMD1 chr2 62362965 + Exonic hg19 LIHC TCGA-DD-A3A5 7 Out-of-Frame Intra-chr p15 p15 Seq+ 7369 ChimerSeq FusionScan TCGA_RNA-Seq HMGCS1-SLC38A9 HMGCS1 chr5 43292575 - SLC38A9 chr5 54965707 - Exonic hg19 LIHC TCGA-DD-A3A5 2 In-Frame Intra-chr p12 q11.2 Seq+ 7370 ChimerSeq FusionScan TCGA_RNA-Seq BID-ATP6V1E1 BID chr22 18220782 - ATP6V1E1 chr22 18096086 - Exonic hg19 LIHC TCGA-BC-4073 9 In-Frame Intra-chr q11.21 q11.21 Seq+ 7371 ChimerSeq FusionScan TCGA_RNA-Seq PTPN11-RPL6 PTPN11 chr12 112884202 + RPL6 chr12 112843180 - Exonic hg19 LIHC TCGA-BC-4073 6 Out-of-Frame Intra-chr q24.13 Oncogene Tumor suppressor gene q24.13 Seq+ 7372 ChimerSeq FusionScan TCGA_RNA-Seq RORA-ANXA2 RORA chr15 61521251 - ANXA2 chr15 60678285 - Exonic hg19 LIHC TCGA-BC-4073 6 In-Frame Intra-chr q22.2 Transcription factor q22.2 Seq+ 7373 ChimerSeq FusionScan TCGA_RNA-Seq FEN1-FADS2 FEN1 chr11 61560500 + FADS2 chr11 61624482 + Exonic hg19 LIHC TCGA-BC-4073 4 5'UTR-CDS Intra-chr q12.2 q12.2 7374 ChimerSeq FusionScan TCGA_RNA-Seq ZDHHC2-VPS37A ZDHHC2 chr8 17014362 + VPS37A chr8 17143855 + Exonic hg19 LIHC TCGA-BC-4073 2 Out-of-Frame Intra-chr p22 Tumor suppressor gene p22 Seq+ 7375 ChimerSeq FusionScan TCGA_RNA-Seq MICAL3-BID MICAL3 chr22 18368643 - BID chr22 18226779 - Exonic hg19 LIHC TCGA-BC-4073 2 In-Frame Intra-chr q11.21 q11.21 7376 ChimerSeq FusionScan TCGA_RNA-Seq CPT1A-ZNF705D CPT1A chr11 68609242 - ZNF705D chr8 11965631 + Exonic hg19 LIHC TCGA-BC-4073 2 5'UTR-5'UTR Inter-chr q13.3 p23.1 Transcription factor 7377 ChimerSeq FusionScan TCGA_RNA-Seq KIF20B-LIPJ KIF20B chr10 91505716 + LIPJ chr10 90362332 + Exonic hg19 LIHC TCGA-BC-A112 2 Out-of-Frame Intra-chr q23.31 q23.31 Seq+ 7378 ChimerSeq FusionScan TCGA_RNA-Seq PSMB2-FAM116B PSMB2 chr1 36096874 - FAM116B chr22 50750846 - Exonic hg19 LIHC TCGA-BC-A112 2 In-Frame Inter-chr p34.3 Seq+ 7379 ChimerSeq FusionScan TCGA_RNA-Seq CLIP1-RSRC2 CLIP1 chr12 122907067 - RSRC2 chr12 122999774 - Exonic hg19 LIHC TCGA-BC-A216 5 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 7380 ChimerSeq FusionScan TCGA_RNA-Seq AGPAT3-RRP1 AGPAT3 chr21 45323900 + RRP1 chr21 45211230 + Exonic hg19 LIHC TCGA-BC-A216 2 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 7381 ChimerSeq FusionScan TCGA_RNA-Seq PSMA3-STRADA PSMA3 chr14 58724716 + STRADA chr17 61781111 - Exonic hg19 LIHC TCGA-FV-A495 2 Out-of-Frame Inter-chr q23.1 q23.3 Tumor suppressor gene Seq+ 7382 ChimerSeq FusionScan TCGA_RNA-Seq XRRA1-SHANK2 XRRA1 chr11 74641344 - SHANK2 chr11 70821095 - Exonic hg19 LIHC TCGA-2Y-A9GS 7 Out-of-Frame Intra-chr q13.4 q13.4 Seq+ 7383 ChimerSeq FusionScan TCGA_RNA-Seq TOP3A-ANAPC16 TOP3A chr17 18186011 - ANAPC16 chr10 73990123 + Exonic hg19 LIHC TCGA-MR-A8JO 2 Out-of-Frame Inter-chr q22.1 Seq+ 7384 ChimerSeq FusionScan TCGA_RNA-Seq TTC28-PITPNB TTC28 chr22 29025539 - PITPNB chr22 28269803 - Exonic hg19 LIHC TCGA-DD-A1EB 5 In-Frame Intra-chr q12.1 q12.1 Seq+ 7385 ChimerSeq FusionScan TCGA_RNA-Seq ZNF385B-CWC22 ZNF385B chr2 180725827 - CWC22 chr2 180858181 - Exonic hg19 LIHC TCGA-DD-A1EB 2 5'UTR-5'UTR Intra-chr q31.3 Transcription factor q31.3 Seq+ 7386 ChimerSeq FusionScan TCGA_RNA-Seq EWSR1-SF1 EWSR1 chr22 29684775 + SF1 chr11 64532990 - Exonic hg19 LIHC TCGA-K7-A5RF 2 In-Frame Inter-chr q12.2 q13.1 7387 ChimerSeq FusionScan TCGA_RNA-Seq PGPEP1-ZNF564 PGPEP1 chr19 18468425 + ZNF564 chr19 12639510 - Exonic hg19 LIHC TCGA-K7-A5RF 2 Out-of-Frame Intra-chr p13.11 p13.2 Transcription factor 7388 ChimerSeq FusionScan TCGA_RNA-Seq MAP4-GTF2H5 MAP4 chr3 48130262 - GTF2H5 chr6 158613008 + Exonic hg19 LIHC TCGA-BC-A69H 2 5'UTR-CDS Inter-chr p21.31 q25.3 Seq+ 7389 ChimerSeq FusionScan TCGA_RNA-Seq AP3D1-AQP3 AP3D1 chr19 2137009 - AQP3 chr9 33443890 - Exonic hg19 LIHC TCGA-DD-A11D 2 In-Frame Inter-chr p13.3 p13.3 7390 ChimerSeq FusionScan TCGA_RNA-Seq ALB-ADH1C ALB chr4 74272478 + ADH1C chr4 100264212 - Exonic hg19 LIHC TCGA-DD-A1EJ 2 In-Frame Intra-chr q13.3 q23 Seq+ 7391 ChimerSeq FusionScan TCGA_RNA-Seq ITPR2-DCDC2 ITPR2 chr12 26780965 - DCDC2 chr6 24278439 - Exonic hg19 LIHC TCGA-DD-A1EJ 2 Out-of-Frame Inter-chr p11.23 p22.3 Tumor suppressor gene Seq+ 7392 ChimerSeq FusionScan TCGA_RNA-Seq MOB3A-VCL MOB3A chr19 2096224 - VCL chr10 75877780 + Exonic hg19 LIHC TCGA-CC-A7IJ 2 5'UTR-CDS Inter-chr p13.3 q22.2 Seq+ 7393 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LIHC TCGA-CC-A7IJ 2 Out-of-Frame Intra-chr q22.2 q22.2 7394 ChimerSeq FusionScan TCGA_RNA-Seq PSMB2-POLG2 PSMB2 chr1 36096874 - POLG2 chr17 62474105 - Exonic hg19 LIHC TCGA-CC-A5UC 2 Out-of-Frame Inter-chr p34.3 q23.3 7395 ChimerSeq FusionScan TCGA_RNA-Seq DNAJB1-PRKACA DNAJB1 chr19 14628950 - PRKACA chr19 14218221 - Exonic hg19 LIHC TCGA-DD-A4NB 5 In-Frame Intra-chr p13.12 Tumor suppressor gene p13.12 KB Pub Seq+ 7396 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0319L-CIB2 KIAA0319L chr1 36022807 - CIB2 chr15 78403618 - Exonic hg19 LIHC TCGA-BW-A5NO 2 5'UTR-CDS Inter-chr p34.3 q25.1 Seq+ 7397 ChimerSeq FusionScan TCGA_RNA-Seq ZNF148-LYPLA2 ZNF148 chr3 125093945 - LYPLA2 chr1 24119146 + Exonic hg19 LIHC TCGA-BW-A5NO 2 5'UTR-5'UTR Inter-chr q21.2 Transcription factor p36.11 Seq+ 7398 ChimerSeq FusionScan TCGA_RNA-Seq NFYC-ZBTB7B NFYC chr1 41157539 + ZBTB7B chr1 154987130 + Exonic hg19 LIHC TCGA-DD-A4NE 2 5'UTR-5'UTR Intra-chr p34.2 Transcription factor q21.3 Transcription factor Seq+ 7399 ChimerSeq FusionScan TCGA_RNA-Seq KDM4B-DKKL1 KDM4B chr19 5047680 + DKKL1 chr19 49877973 + Exonic hg19 LIHC TCGA-KR-A7K8 4 Out-of-Frame Intra-chr p13.3 q13.33 Seq+ 7400 ChimerSeq FusionScan TCGA_RNA-Seq PIK3AP1-AVPI1 PIK3AP1 chr10 98408415 - AVPI1 chr10 99437782 - Exonic hg19 LIHC TCGA-KR-A7K8 2 Out-of-Frame Intra-chr q24.1 q24.2 Seq+ 7401 ChimerSeq FusionScan TCGA_RNA-Seq CDC27-SNF8 CDC27 chr17 45266511 - SNF8 chr17 47018424 - Exonic hg19 LIHC TCGA-KR-A7K8 2 In-Frame Intra-chr q21.32 q21.32 Seq+ 7402 ChimerSeq FusionScan TCGA_RNA-Seq TFB2M-ZNF124 TFB2M chr1 246711846 - ZNF124 chr1 247287173 - Exonic hg19 LIHC TCGA-KR-A7K8 2 Out-of-Frame Intra-chr q44 q44 Transcription factor Seq+ 7403 ChimerSeq FusionScan TCGA_RNA-Seq CPT1A-PPFIA1 CPT1A chr11 68609242 - PPFIA1 chr11 70170507 + Exonic hg19 LIHC TCGA-DD-A4ND 2 5'UTR-5'UTR Intra-chr q13.3 q13.3 Seq+ 7404 ChimerSeq FusionScan TCGA_RNA-Seq HSD17B11-UGT2A3 HSD17B11 chr4 88312012 - UGT2A3 chr4 69798477 - Exonic hg19 LIHC TCGA-BD-A2L6 4 CDS-5'UTR Intra-chr q22.1 Seq+ 7405 ChimerSeq FusionScan TCGA_RNA-Seq MTHFS-BCL2A1 MTHFS chr15 80189213 - BCL2A1 chr15 80253516 - Exonic hg19 LIHC TCGA-DD-A73G 2 In-Frame Intra-chr q25.1 q25.1 Seq+ 7406 ChimerSeq FusionScan TCGA_RNA-Seq BACE2-FAM3B BACE2 chr21 42629253 + FAM3B chr21 42710304 + Exonic hg19 LIHC TCGA-G3-A7M9 2 In-Frame Intra-chr q22.2 q22.3 Seq+ 7407 ChimerSeq FusionScan TCGA_RNA-Seq NCK1-IL20RB NCK1 chr3 136647069 + IL20RB chr3 136699307 + Exonic hg19 LIHC TCGA-DD-A1EE 2 In-Frame Intra-chr q22.3 q22.3 Seq+ 7408 ChimerSeq FusionScan TCGA_RNA-Seq CIDEB-PTEN CIDEB chr14 24775579 - PTEN chr10 89711874 + Exonic hg19 LIHC TCGA-BC-A3KG 5 In-Frame Inter-chr q12 q23.31 Oncogene Tumor suppressor gene Seq+ 7409 ChimerSeq FusionScan TCGA_RNA-Seq COBLL1-SLC38A11 COBLL1 chr2 165697665 - SLC38A11 chr2 165772483 - Exonic hg19 LIHC TCGA-BC-A3KG 3 In-Frame Intra-chr q24.3 q24.3 Seq+ 7410 ChimerSeq FusionScan TCGA_RNA-Seq PPP6R2-CBX1 PPP6R2 chr22 50845304 + CBX1 chr17 46152462 - Exonic hg19 LIHC TCGA-BC-A3KG 3 In-Frame Inter-chr q13.33 q21.32 Seq+ 7411 ChimerSeq FusionScan TCGA_RNA-Seq HIVEP1-PTCRA HIVEP1 chr6 12015901 + PTCRA chr6 42890764 + Exonic hg19 LIHC TCGA-4R-AA8I 2 In-Frame Intra-chr p24.1 Tumor suppressor gene Transcription factor p21.1 Seq+ 7412 ChimerSeq FusionScan TCGA_RNA-Seq SEPT9-MYH13 SEPT9 chr17 75303279 + MYH13 chr17 10263505 - Exonic hg19 LIHC TCGA-4R-AA8I 2 In-Frame Intra-chr p13.1 Seq+ 7413 ChimerSeq FusionScan TCGA_RNA-Seq APP-LINC00159 APP chr21 27277335 - LINC00159 chr21 33458608 - Exonic hg19 LIHC TCGA-RC-A6M3 2 CDS-5'UTR Intra-chr q21.3 q22.11 Seq+ 7414 ChimerSeq FusionScan TCGA_RNA-Seq DNAJB1-PRKACA DNAJB1 chr19 14628950 - PRKACA chr19 14218221 - Exonic hg19 LIHC TCGA-RC-A6M3 2 In-Frame Intra-chr p13.12 Tumor suppressor gene p13.12 KB Pub Seq+ 7415 ChimerSeq FusionScan TCGA_RNA-Seq RARRES3-ATL3 RARRES3 chr11 63307096 + ATL3 chr11 63396877 - Exonic hg19 LIHC TCGA-DD-A73B 2 Out-of-Frame Intra-chr q12.3 Tumor suppressor gene q13.1 7416 ChimerSeq FusionScan TCGA_RNA-Seq FAM20C-GLUL FAM20C chr7 208976 + GLUL chr1 182357885 - Exonic hg19 LIHC TCGA-DD-A4NQ 2 CDS-5'UTR Inter-chr p22.3 q25.3 7417 ChimerSeq FusionScan TCGA_RNA-Seq DFNB31-AMBP DFNB31 chr9 117228546 - AMBP chr9 116839020 - Exonic hg19 LIHC TCGA-BC-A8YO 8 In-Frame Intra-chr q32 Seq+ 7418 ChimerSeq FusionScan TCGA_RNA-Seq WNK1-B4GALNT3 WNK1 chr12 939326 + B4GALNT3 chr12 657396 + Exonic hg19 LIHC TCGA-BC-A8YO 3 In-Frame Intra-chr p13.33 p13.33 KB Pub Seq+ 7419 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP42-KMO ARHGAP42 chr11 100730356 + KMO chr1 241749980 + Exonic hg19 LIHC TCGA-BC-A8YO 2 In-Frame Inter-chr q22.1 q43 Seq+ 7420 ChimerSeq FusionScan TCGA_RNA-Seq ATL3-RTN3 ATL3 chr11 63426232 - RTN3 chr11 63517462 + Exonic hg19 LIHC TCGA-BC-A8YO 2 Out-of-Frame Intra-chr q13.1 q13.1 Seq+ 7421 ChimerSeq FusionScan TCGA_RNA-Seq NFE2L2-TMEM194B NFE2L2 chr2 178129259 - TMEM194B chr2 191390104 - Exonic hg19 LIHC TCGA-BC-A8YO 2 Out-of-Frame Intra-chr q31.2 Oncogene Transcription factor Seq+ 7422 ChimerSeq FusionScan TCGA_RNA-Seq TM2D2-IDO2 TM2D2 chr8 38853731 - IDO2 chr8 39871083 + Exonic hg19 LIHC TCGA-CC-A9FU 2 In-Frame Intra-chr p11.22 p11.21 Seq+ 7423 ChimerSeq FusionScan TCGA_RNA-Seq PDHB-C3orf67 PDHB chr3 58415434 - C3orf67 chr3 58739590 - Exonic hg19 LIHC TCGA-DD-A73A 2 Out-of-Frame Intra-chr p14.3 p14.2 Seq+ 7424 ChimerSeq FusionScan TCGA_RNA-Seq HDAC4-THAP4 HDAC4 chr2 240274372 - THAP4 chr2 242545888 - Exonic hg19 LIHC TCGA-CC-A3MA 7 In-Frame Intra-chr q37.3 q37.3 Transcription factor Seq+ 7425 ChimerSeq FusionScan TCGA_RNA-Seq RNF115-FAM72D RNF115 chr1 145650540 + FAM72D chr1 143897641 - Exonic hg19 LIHC TCGA-CC-A3MA 4 Out-of-Frame Intra-chr q21.1 q21.1 Seq+ 7426 ChimerSeq FusionScan TCGA_RNA-Seq CEBPG-GPATCH1 CEBPG chr19 33864801 + GPATCH1 chr19 33617493 + Exonic hg19 LIHC TCGA-DD-A73F 5 5'UTR-CDS Intra-chr q13.11 Transcription factor q13.11 Seq+ 7427 ChimerSeq FusionScan TCGA_RNA-Seq GNB1-TXNDC11 GNB1 chr1 1822258 - TXNDC11 chr16 11778101 - Exonic hg19 LIHC TCGA-DD-A73F 3 5'UTR-CDS Inter-chr p36.33 p13.13 Seq+ 7428 ChimerSeq FusionScan TCGA_RNA-Seq EP300-RBX1 EP300 chr22 41551117 + RBX1 chr22 41363802 + Exonic hg19 LIHC TCGA-DD-A73F 2 In-Frame Intra-chr q13.2 Oncogene q13.2 Seq+ 7429 ChimerSeq FusionScan TCGA_RNA-Seq PRRG4-CROT PRRG4 chr11 32861785 + CROT chr7 87027839 + Exonic hg19 LIHC TCGA-DD-A73F 2 In-Frame Inter-chr p13 q21.12 Seq+ 7430 ChimerSeq FusionScan TCGA_RNA-Seq CACNA1D-IL17RB CACNA1D chr3 53535747 + IL17RB chr3 53898772 + Exonic hg19 LIHC TCGA-ED-A4XI 2 Out-of-Frame Intra-chr p21.1 p21.1 Seq+ 7431 ChimerSeq FusionScan TCGA_RNA-Seq C4BPA-MAPKAPK2 C4BPA chr1 207307937 + MAPKAPK2 chr1 206902054 + Exonic hg19 LIHC TCGA-FV-A496 2 Out-of-Frame Intra-chr q32.2 q32.1 CAMK:MAPKAPK Seq+ 7432 ChimerSeq FusionScan TCGA_RNA-Seq USP9X-ATP6AP2 USP9X chrX 41031211 + ATP6AP2 chrX 40464812 + Exonic hg19 LIHC TCGA-FV-A496 2 Out-of-Frame Intra-chr p11.4 Oncogene p11.4 Seq+ 7433 ChimerSeq FusionScan TCGA_RNA-Seq DNAJB1-PRKACA DNAJB1 chr19 14628950 - PRKACA chr19 14218221 - Exonic hg19 LIHC TCGA-DD-A1EC 8 In-Frame Intra-chr p13.12 Tumor suppressor gene p13.12 KB Pub Seq+ 7434 ChimerSeq FusionScan TCGA_RNA-Seq SFXN2-SUFU SFXN2 chr10 104474438 + SUFU chr10 104352338 + Exonic hg19 LIHC TCGA-CC-A7IG 3 5'UTR-CDS Intra-chr q24.32 q24.32 Oncogene Tumor suppressor gene Seq+ 7435 ChimerSeq FusionScan TCGA_RNA-Seq APOC2-NOXRED1 APOC2 chr19 45449332 + NOXRED1 chr14 77872478 - Exonic hg19 LIHC TCGA-NI-A4U2 3 5'UTR-CDS Inter-chr q13.32 q24.3 7436 ChimerSeq FusionScan TCGA_RNA-Seq CYB5A-ZNF516 CYB5A chr18 71958981 - ZNF516 chr18 74074512 - Exonic hg19 LIHC TCGA-NI-A4U2 2 In-Frame Intra-chr q22.3 Tumor suppressor gene q23 Transcription factor 7437 ChimerSeq FusionScan TCGA_RNA-Seq CMPK2-C7orf31 CMPK2 chr2 7001314 - C7orf31 chr7 25176412 - Exonic hg19 LIHC TCGA-NI-A4U2 2 Out-of-Frame Inter-chr p25.2 p15.3 7438 ChimerSeq FusionScan TCGA_RNA-Seq FLCN-NCBP2 FLCN chr17 17122332 - NCBP2 chr3 196663953 - Exonic hg19 LIHC TCGA-NI-A4U2 2 In-Frame Inter-chr p11.2 Oncogene Tumor suppressor gene q29 7439 ChimerSeq FusionScan TCGA_RNA-Seq HBS1L-POLN HBS1L chr6 135360710 - POLN chr4 2087471 - Exonic hg19 LIHC TCGA-CC-A7IH 2 In-Frame Inter-chr q23.3 p16.3 7440 ChimerSeq FusionScan TCGA_RNA-Seq SOBP-VTA1 SOBP chr6 107908379 + VTA1 chr6 142510562 + Exonic hg19 LIHC TCGA-CC-5261 2 In-Frame Intra-chr q21 q24.1 7441 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS6-PPP6R3 TMPRSS6 chr22 37499255 - PPP6R3 chr11 68377371 + Exonic hg19 LIHC TCGA-2Y-A9H2 5 Out-of-Frame Inter-chr q12.3 Tumor suppressor gene q13.2 Seq+ 7442 ChimerSeq FusionScan TCGA_RNA-Seq NUMA1-CADM2 NUMA1 chr11 71791503 - CADM2 chr3 86114754 + Exonic hg19 LIHC TCGA-2Y-A9H2 2 5'UTR-CDS Inter-chr q13.4 Oncogene p12.1 Tumor suppressor gene Seq+ 7443 ChimerSeq FusionScan TCGA_RNA-Seq SOCS7-TBC1D3F SOCS7 chr17 36508915 + TBC1D3F chr17 36287147 + Exonic hg19 LIHC TCGA-2Y-A9GX 2 In-Frame Intra-chr q12 q12 7444 ChimerSeq FusionScan TCGA_RNA-Seq PFDN2-APOA2 PFDN2 chr1 161087741 - APOA2 chr1 161192840 - Exonic hg19 LIHC TCGA-CC-5263 16 Out-of-Frame Intra-chr q23.3 q23.3 Seq+ 7445 ChimerSeq FusionScan TCGA_RNA-Seq NIN-TPM1 NIN chr14 51297181 - TPM1 chr15 63349183 + Exonic hg19 LIHC TCGA-CC-5263 8 5'UTR-CDS Inter-chr q22.1 Oncogene q22.2 Seq+ 7446 ChimerSeq FusionScan TCGA_RNA-Seq PFDN2-APOA2 PFDN2 chr1 161087741 - APOA2 chr1 161192312 - Exonic hg19 LIHC TCGA-CC-5263 7 Out-of-Frame Intra-chr q23.3 q23.3 Seq+ 7447 ChimerSeq FusionScan TCGA_RNA-Seq OCLN-GPR98 OCLN chr5 68788486 + GPR98 chr5 90261231 + Exonic hg19 LIHC TCGA-CC-5263 6 5'UTR-5'UTR Intra-chr q13.2 Seq+ 7448 ChimerSeq FusionScan TCGA_RNA-Seq CNN3-ALG14 CNN3 chr1 95392393 - ALG14 chr1 95448862 - Exonic hg19 LIHC TCGA-CC-5263 5 In-Frame Intra-chr p21.3 p21.3 Seq+ 7449 ChimerSeq FusionScan TCGA_RNA-Seq TMCO6-CYSTM1 TMCO6 chr5 140021365 + CYSTM1 chr5 139622889 + Exonic hg19 LIHC TCGA-CC-5263 4 Out-of-Frame Intra-chr q31.3 q31.3 Seq+ 7450 ChimerSeq FusionScan TCGA_RNA-Seq ABL1-PRDM12 ABL1 chr9 133589842 + PRDM12 chr9 133553915 + Exonic hg19 LIHC TCGA-CC-5263 4 Out-of-Frame Intra-chr q34.12 TK:Abl Oncogene q34.12 Transcription factor Seq+ 7451 ChimerSeq FusionScan TCGA_RNA-Seq NECAB3-PXMP4 NECAB3 chr20 32257180 - PXMP4 chr20 32302542 - Exonic hg19 LIHC TCGA-CC-5263 3 Out-of-Frame Intra-chr q11.22 q11.22 Seq+ 7452 ChimerSeq FusionScan TCGA_RNA-Seq FAM222B-FLOT2 FAM222B chr17 27169699 - FLOT2 chr17 27211333 - Exonic hg19 LIHC TCGA-CC-5263 3 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 7453 ChimerSeq FusionScan TCGA_RNA-Seq CLMN-VTI1B CLMN chr14 95786047 - VTI1B chr14 68120215 - Exonic hg19 LIHC TCGA-CC-5263 2 Out-of-Frame Intra-chr q32.13 q24.1 Seq+ 7454 ChimerSeq FusionScan TCGA_RNA-Seq FAM222B-FLOT2 FAM222B chr17 27161310 - FLOT2 chr17 27211333 - Exonic hg19 LIHC TCGA-CC-5263 2 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 7455 ChimerSeq FusionScan TCGA_RNA-Seq ANXA4-PKN1 ANXA4 chr2 70008706 + PKN1 chr19 14578376 + Exonic hg19 LIHC TCGA-BC-4072 9 5'UTR-CDS Inter-chr p13.3 p13.12 AGC:PKN Seq+ 7456 ChimerSeq FusionScan TCGA_RNA-Seq PKN1-ANXA4 PKN1 chr19 14574965 + ANXA4 chr2 70015185 + Exonic hg19 LIHC TCGA-BC-4072 2 CDS-5'UTR Inter-chr p13.12 AGC:PKN p13.3 Seq+ 7457 ChimerSeq FusionScan TCGA_RNA-Seq DNM2-SLC44A2 DNM2 chr19 10930765 + SLC44A2 chr19 10736928 + Exonic hg19 LIHC TCGA-GJ-A6C0 2 Out-of-Frame Intra-chr p13.2 p13.2 Seq+ 7458 ChimerSeq FusionScan TCGA_RNA-Seq SMG7-ZC3H3 SMG7 chr1 183441784 + ZC3H3 chr8 144557755 - Exonic hg19 LIHC TCGA-GJ-A6C0 2 In-Frame Inter-chr q25.3 7459 ChimerSeq FusionScan TCGA_RNA-Seq RBFOX2-FAM86A RBFOX2 chr22 36424287 - FAM86A chr16 5135733 - Exonic hg19 LIHC TCGA-LG-A9QC 2 Out-of-Frame Inter-chr Seq+ 7460 ChimerSeq FusionScan TCGA_RNA-Seq PLXND1-IL32 PLXND1 chr3 129303227 - IL32 chr16 3119281 + Exonic hg19 LIHC TCGA-DD-A1EG 2 Out-of-Frame Inter-chr q22.1 p13.3 7461 ChimerSeq FusionScan TCGA_RNA-Seq ARID4B-SMYD3 ARID4B chr1 235490228 - SMYD3 chr1 246027188 - Exonic hg19 LIHC TCGA-DD-A1EG 2 In-Frame Intra-chr q42.3 q44 Transcription factor 7462 ChimerSeq FusionScan TCGA_RNA-Seq ZNF781-FIP1L1 ZNF781 chr19 38182421 - FIP1L1 chr4 54265896 + Exonic hg19 LIHC TCGA-DD-A1EG 2 5'UTR-CDS Inter-chr q13.12 Transcription factor q12 7463 ChimerSeq FusionScan TCGA_RNA-Seq HBS1L-POLN HBS1L chr6 135360710 - POLN chr4 2087471 - Exonic hg19 LIHC TCGA-EP-A26S 2 In-Frame Inter-chr q23.3 p16.3 7464 ChimerSeq FusionScan TCGA_RNA-Seq ECHDC2-AMACR ECHDC2 chr1 53387224 - AMACR chr5 34006004 - Exonic hg19 LIHC TCGA-DD-A39W 2 In-Frame Inter-chr p32.3 p13.2 7465 ChimerSeq FusionScan TCGA_RNA-Seq MTMR3-TSHZ2 MTMR3 chr22 30279348 + TSHZ2 chr20 52103682 + Exonic hg19 LIHC TCGA-EP-A2KA 5 5'UTR-3'UTR Inter-chr q12.2 q13.2 Transcription factor Seq+ 7466 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-RNF207 RPL22 chr1 6252989 - RNF207 chr1 6278348 + Exonic hg19 LIHC TCGA-EP-A2KA 3 In-Frame Intra-chr p36.31 p36.31 Seq+ 7467 ChimerSeq FusionScan TCGA_RNA-Seq CTIF-C18orf25 CTIF chr18 46197115 + C18orf25 chr18 43833662 + Exonic hg19 LIHC TCGA-EP-A2KA 2 Out-of-Frame Intra-chr q21.1 Seq+ 7468 ChimerSeq FusionScan TCGA_RNA-Seq UTRN-AIG1 UTRN chr6 144860579 + AIG1 chr6 143457971 + Exonic hg19 LIHC TCGA-EP-A2KA 2 In-Frame Intra-chr q24.2 q24.2 Seq+ 7469 ChimerSeq FusionScan TCGA_RNA-Seq DIS3L2-SP100 DIS3L2 chr2 232826475 + SP100 chr2 231307651 + Exonic hg19 LIHC TCGA-EP-A2KA 2 5'UTR-CDS Intra-chr q37.1 q37.1 Tumor suppressor gene Transcription factor Seq+ 7470 ChimerSeq FusionScan TCGA_RNA-Seq ACAP2-DLG1 ACAP2 chr3 195112818 - DLG1 chr3 196778539 - Exonic hg19 LIHC TCGA-EP-A2KA 2 Out-of-Frame Intra-chr q29 q29 Tumor suppressor gene Seq+ 7471 ChimerSeq FusionScan TCGA_RNA-Seq ST7-FOXP2 ST7 chr7 116593745 + FOXP2 chr7 114066556 + Exonic hg19 LIHC TCGA-EP-A2KA 2 CDS-5'UTR Intra-chr q31.2 Tumor suppressor gene q31.1 Transcription factor Seq+ 7472 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R5C-CCDC28B PPP2R5C chr14 102360897 + CCDC28B chr1 32667513 + Exonic hg19 LIHC TCGA-EP-A2KA 2 CDS-5'UTR Inter-chr q32.31 Tumor suppressor gene p35.2 Seq+ 7473 ChimerSeq FusionScan TCGA_RNA-Seq MAP4-QRICH1 MAP4 chr3 47956306 - QRICH1 chr3 49068077 - Exonic hg19 LIHC TCGA-EP-A2KA 2 Out-of-Frame Intra-chr p21.31 p21.31 Seq+ 7474 ChimerSeq FusionScan TCGA_RNA-Seq MTSS1-KIAA0196 MTSS1 chr8 125597327 - KIAA0196 chr8 126040949 - Exonic hg19 LIHC TCGA-QA-A7B7 13 Out-of-Frame Intra-chr q24.13 Tumor suppressor gene Seq+ 7475 ChimerSeq FusionScan TCGA_RNA-Seq PDLIM5-SMARCAD1 PDLIM5 chr4 95497185 + SMARCAD1 chr4 95210623 + Exonic hg19 LIHC TCGA-QA-A7B7 5 Out-of-Frame Intra-chr q22.3 q22.3 Seq+ 7476 ChimerSeq FusionScan TCGA_RNA-Seq CCNT2-ACMSD CCNT2 chr2 135677461 + ACMSD chr2 135602802 + Exonic hg19 LIHC TCGA-BC-A10R 4 In-Frame Intra-chr q21.3 q21.3 Seq+ 7477 ChimerSeq FusionScan TCGA_RNA-Seq CCNT2-ACMSD CCNT2 chr2 135677461 + ACMSD chr2 135616830 + Exonic hg19 LIHC TCGA-BC-A10R 2 In-Frame Intra-chr q21.3 q21.3 Seq+ 7478 ChimerSeq FusionScan TCGA_RNA-Seq EIF3L-AK7 EIF3L chr22 38270531 + AK7 chr14 96922683 + Exonic hg19 LIHC TCGA-BC-A10R 2 In-Frame Inter-chr q13.1 q32.2 Seq+ 7479 ChimerSeq FusionScan TCGA_RNA-Seq VNN1-SLC18B1 VNN1 chr6 133032847 - SLC18B1 chr6 133091475 - Exonic hg19 LIHC TCGA-BC-A10R 2 In-Frame Intra-chr q23.2 q23.2 Seq+ 7480 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC17-ZFYVE19 DNAJC17 chr15 41071420 - ZFYVE19 chr15 41104896 + Exonic hg19 LIHC TCGA-G3-A25T 3 In-Frame Intra-chr q15.1 q15.1 Seq+ 7481 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC17-ZFYVE19 DNAJC17 chr15 41071420 - ZFYVE19 chr15 41105535 + Exonic hg19 LIHC TCGA-G3-A25T 3 In-Frame Intra-chr q15.1 q15.1 Seq+ 7482 ChimerSeq FusionScan TCGA_RNA-Seq ILF3-SMARCA4 ILF3 chr19 10782211 + SMARCA4 chr19 11134193 + Exonic hg19 LIHC TCGA-CC-A7IE 3 In-Frame Intra-chr p13.2 p13.2 Oncogene Tumor suppressor gene Seq+ 7483 ChimerSeq FusionScan TCGA_RNA-Seq ST7-COG5 ST7 chr7 116593745 + COG5 chr7 107053077 - Exonic hg19 LIHC TCGA-RC-A6M6 5 In-Frame Intra-chr q31.2 Tumor suppressor gene Seq+ 7484 ChimerSeq FusionScan TCGA_RNA-Seq PPARA-MTA2 PPARA chr22 46547873 + MTA2 chr11 62362964 - Exonic hg19 LIHC TCGA-CC-A9FV 2 5'UTR-CDS Inter-chr q13.31 Tumor suppressor gene Transcription factor q12.3 7485 ChimerSeq FusionScan TCGA_RNA-Seq MATR3-PAIP2 MATR3 chr5 138629494 + PAIP2 chr5 138699447 + Exonic hg19 LIHC TCGA-DD-A113 2 5'UTR-5'UTR Intra-chr q31.2 q31.2 Tumor suppressor gene 7486 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D2B-CIB2 TBC1D2B chr15 78346375 - CIB2 chr15 78403618 - Exonic hg19 LIHC TCGA-ED-A7PX 3 Out-of-Frame Intra-chr q25.1 q25.1 Seq+ 7487 ChimerSeq FusionScan TCGA_RNA-Seq FGFR2-BICC1 FGFR2 chr10 123243211 - BICC1 chr10 60461833 + Exonic hg19 LIHC TCGA-ED-A7PX 3 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q21.1 Seq+ 7488 ChimerSeq FusionScan TCGA_RNA-Seq POP1-TATDN1 POP1 chr8 99146887 + TATDN1 chr8 125500937 - Exonic hg19 LIHC TCGA-HP-A5N0 3 Out-of-Frame Intra-chr q22.2 q24.13 Seq+ 7489 ChimerSeq FusionScan TCGA_RNA-Seq ATXN1-DTNBP1 ATXN1 chr6 16486202 - DTNBP1 chr6 15533626 - Exonic hg19 LIHC TCGA-HP-A5N0 2 5'UTR-CDS Intra-chr p22.3 p22.3 Seq+ 7490 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KA3-EIF1AY RPS6KA3 chrX 20284681 - EIF1AY chrY 22744475 + Exonic hg19 LIHC TCGA-DD-AADJ 4 Out-of-Frame Inter-chr p22.12 q11.223 7491 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KA3-EIF1AX RPS6KA3 chrX 20284681 - EIF1AX chrX 20153959 - Exonic hg19 LIHC TCGA-DD-AADJ 4 Out-of-Frame Intra-chr p22.12 p22.12 Seq+ 7492 ChimerSeq FusionScan TCGA_RNA-Seq IDUA-ALS2CR12 IDUA chr4 981737 + ALS2CR12 chr2 202154508 - Exonic hg19 LIHC TCGA-DD-AAD5 2 Out-of-Frame Inter-chr p16.3 q33.1 Seq+ 7493 ChimerSeq FusionScan TCGA_RNA-Seq TECR-NDUFB7 TECR chr19 14640523 + NDUFB7 chr19 14677745 - Exonic hg19 LIHC TCGA-DD-AADB 3 Out-of-Frame Intra-chr p13.12 p13.12 Seq+ 7494 ChimerSeq FusionScan TCGA_RNA-Seq FAM168A-PPME1 FAM168A chr11 73308967 - PPME1 chr11 73914772 + Exonic hg19 LIHC TCGA-DD-AADY 2 5'UTR-CDS Intra-chr q13.4 q13.4 Seq+ 7495 ChimerSeq FusionScan TCGA_RNA-Seq ABCC2-CTNNA3 ABCC2 chr10 101544538 + CTNNA3 chr10 67680375 - Exonic hg19 LIHC TCGA-DD-AAEA 5 In-Frame Intra-chr q24.2 q21.3 Tumor suppressor gene Seq+ 7496 ChimerSeq FusionScan TCGA_RNA-Seq SMURF1-CDRT15L2 SMURF1 chr7 98741348 - CDRT15L2 chr17 20483461 + Exonic hg19 LIHC TCGA-DD-AACH 2 In-Frame Inter-chr p11.2 Seq+ 7497 ChimerSeq FusionScan TCGA_RNA-Seq AHSG-KNG1 AHSG chr3 186335139 + KNG1 chr3 186461493 + Exonic hg19 LIHC TCGA-DD-AACG 2 In-Frame Intra-chr q27.3 q27.3 7498 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-PRKCA CLTC chr17 57697534 + PRKCA chr17 64683228 + Exonic hg19 LIHC TCGA-DD-AADC 2 Out-of-Frame Intra-chr q23.1 q24.2 Seq+ 7499 ChimerSeq FusionScan TCGA_RNA-Seq EXOSC5-FCGBP EXOSC5 chr19 41893418 - FCGBP chr19 40354532 - Exonic hg19 LIHC TCGA-DD-AADC 2 In-Frame Intra-chr q13.2 Seq+ 7500 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KA3-MAP7D2 RPS6KA3 chrX 20284681 - MAP7D2 chrX 20044070 - Exonic hg19 LIHC TCGA-CC-A123 2 Out-of-Frame Intra-chr p22.12 p22.12 Seq+ 7501 ChimerSeq FusionScan TCGA_RNA-Seq CLSTN3-LRRC23 CLSTN3 chr12 7295907 + LRRC23 chr12 7023054 + Exonic hg19 LIHC TCGA-DD-AADA 7 In-Frame Intra-chr p13.31 p13.31 Seq+ 7502 ChimerSeq FusionScan TCGA_RNA-Seq SEC14L2-CCDC157 SEC14L2 chr22 30812392 + CCDC157 chr22 30757949 + Exonic hg19 LIHC TCGA-DD-AADL 2 CDS-5'UTR Intra-chr q12.2 Tumor suppressor gene q12.2 Seq+ 7503 ChimerSeq FusionScan TCGA_RNA-Seq RXRA-WDR5 RXRA chr9 137218505 + WDR5 chr9 137017104 + Exonic hg19 LIHC TCGA-2Y-A9GZ 2 Out-of-Frame Intra-chr q34.2 Transcription factor q34.2 Seq+ 7504 ChimerSeq FusionScan TCGA_RNA-Seq ESRRA-KCNK4 ESRRA chr11 64074976 + KCNK4 chr11 64064349 + Exonic hg19 LIHC TCGA-2Y-A9GZ 2 Out-of-Frame Intra-chr q13.1 Transcription factor q13.1 Seq+ 7505 ChimerSeq FusionScan TCGA_RNA-Seq PAPSS2-PTEN PAPSS2 chr10 89419765 + PTEN chr10 89717609 + Exonic hg19 LIHC TCGA-WJ-A86L 3 Out-of-Frame Intra-chr q23.2 q23.31 Oncogene Tumor suppressor gene Seq+ 7506 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD40-LRRC6 ANKRD40 chr17 48774300 - LRRC6 chr8 133622507 - Exonic hg19 LUAD TCGA-L9-A443 2 In-Frame Inter-chr q21.33 q24.22 Seq+ 7507 ChimerSeq FusionScan TCGA_RNA-Seq SLC22A25-PACS1 SLC22A25 chr11 62995932 - PACS1 chr11 65998018 + Exonic hg19 LUAD TCGA-97-8174 4 Out-of-Frame Intra-chr q12.3 q13.1 Seq+ 7508 ChimerSeq FusionScan TCGA_RNA-Seq ECHDC1-FYN ECHDC1 chr6 127635960 - FYN chr6 112029223 - Exonic hg19 LUAD TCGA-97-8174 4 In-Frame Intra-chr q22.33 q21 TK:Src Seq+ 7509 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57762587 + VMP1 chr17 57851114 + Exonic hg19 LUAD TCGA-86-8279 2 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 7510 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57761346 + VMP1 chr17 57851114 + Exonic hg19 LUAD TCGA-86-8279 2 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 7511 ChimerSeq FusionScan TCGA_RNA-Seq COL5A1-DNPEP COL5A1 chr9 137681054 + DNPEP chr2 220239744 - Exonic hg19 LUAD TCGA-NJ-A4YP 2 In-Frame Inter-chr q34.3 q35 7512 ChimerSeq FusionScan TCGA_RNA-Seq ZNF512-BRE ZNF512 chr2 27806009 + BRE chr2 28561316 + Exonic hg19 LUAD TCGA-44-3398 2 Out-of-Frame Intra-chr p23.3 Transcription factor Seq+ 7513 ChimerSeq FusionScan TCGA_RNA-Seq TANC2-CRB3 TANC2 chr17 61345234 + CRB3 chr19 6465555 + Exonic hg19 LUAD TCGA-50-5946 4 In-Frame Inter-chr q23.2 p13.3 Seq+ 7514 ChimerSeq FusionScan TCGA_RNA-Seq RFX2-EPOR RFX2 chr19 6110403 - EPOR chr19 11489454 - Exonic hg19 LUAD TCGA-50-5946 2 5'UTR-CDS Intra-chr p13.3 Transcription factor p13.2 Seq+ 7515 ChimerSeq FusionScan TCGA_RNA-Seq UNK-ZNF266 UNK chr17 73781065 + ZNF266 chr19 9530894 - Exonic hg19 LUAD TCGA-50-5946 2 5'UTR-5'UTR Inter-chr q25.1 p13.2 Transcription factor Seq+ 7516 ChimerSeq FusionScan TCGA_RNA-Seq NIPBL-SLC1A3 NIPBL chr5 36877280 + SLC1A3 chr5 36671130 + Exonic hg19 LUAD TCGA-50-5946 2 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 7517 ChimerSeq FusionScan TCGA_RNA-Seq ZNF587-BAX ZNF587 chr19 58367601 + BAX chr19 49464066 + Exonic hg19 LUAD TCGA-50-6591 7 Out-of-Frame Intra-chr q13.43 Transcription factor q13.33 Tumor suppressor gene Seq+ 7518 ChimerSeq FusionScan TCGA_RNA-Seq ZNF417-BAX ZNF417 chr19 58423427 - BAX chr19 49464066 + Exonic hg19 LUAD TCGA-50-6591 7 Out-of-Frame Intra-chr q13.43 Transcription factor q13.33 Tumor suppressor gene Seq+ 7519 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LUAD TCGA-50-6591 2 Out-of-Frame Intra-chr q22.2 q22.2 7520 ChimerSeq FusionScan TCGA_RNA-Seq MYO1E-BNIP2 MYO1E chr15 59664696 - BNIP2 chr15 59956319 - Exonic hg19 LUAD TCGA-44-7660 2 Out-of-Frame Intra-chr q22.2 q22.2 Seq+ 7521 ChimerSeq FusionScan TCGA_RNA-Seq SCAMP1-RAP1B SCAMP1 chr5 77656552 + RAP1B chr12 69042478 + Exonic hg19 LUAD TCGA-55-1594 2 CDS-5'UTR Inter-chr q14.1 q15 7522 ChimerSeq FusionScan TCGA_RNA-Seq TSPAN14-DYDC2 TSPAN14 chr10 82249070 + DYDC2 chr10 82122190 + Exonic hg19 LUAD TCGA-55-1594 2 CDS-5'UTR Intra-chr q23.1 q23.1 Seq+ 7523 ChimerSeq FusionScan TCGA_RNA-Seq COX6B1-TTYH1 COX6B1 chr19 36142251 + TTYH1 chr19 54937849 + Exonic hg19 LUAD TCGA-49-4488 2 Out-of-Frame Intra-chr q13.12 Seq+ 7524 ChimerSeq FusionScan TCGA_RNA-Seq CRLF1-FKBP8 CRLF1 chr19 18717351 - FKBP8 chr19 18643065 - Exonic hg19 LUAD TCGA-69-7763 6 Out-of-Frame Intra-chr p13.11 p13.11 7525 ChimerSeq FusionScan TCGA_RNA-Seq CLSTN1-CTNNBIP1 CLSTN1 chr1 9809518 - CTNNBIP1 chr1 9910834 - Exonic hg19 LUAD TCGA-55-8616 2 In-Frame Intra-chr p36.22 p36.22 Tumor suppressor gene Seq+ 7526 ChimerSeq FusionScan TCGA_RNA-Seq MAL2-ARFGEF1 MAL2 chr8 120220844 + ARFGEF1 chr8 68130373 - Exonic hg19 LUAD TCGA-05-4422 7 In-Frame Intra-chr q24.12 q13.2 Seq+ 7527 ChimerSeq FusionScan TCGA_RNA-Seq ZHX1-RALYL ZHX1 chr8 124286456 - RALYL chr8 85686813 + Exonic hg19 LUAD TCGA-05-4422 3 5'UTR-CDS Intra-chr q24.13 Transcription factor q21.2 Seq+ 7528 ChimerSeq FusionScan TCGA_RNA-Seq NDRG1-SNTB1 NDRG1 chr8 134292474 - SNTB1 chr8 121706148 - Exonic hg19 LUAD TCGA-05-4422 2 Out-of-Frame Intra-chr q24.22 Tumor suppressor gene q24.12 Seq+ 7529 ChimerSeq FusionScan TCGA_RNA-Seq STK38-PXT1 STK38 chr6 36507848 - PXT1 chr6 36368361 - Exonic hg19 LUAD TCGA-44-3917 2 Out-of-Frame Intra-chr p21.31 p21.31 Seq+ 7530 ChimerSeq FusionScan TCGA_RNA-Seq ITCH-TSHZ2 ITCH chr20 33012331 + TSHZ2 chr20 52103682 + Exonic hg19 LUAD TCGA-86-7955 2 CDS-3'UTR Intra-chr q11.22 q13.2 Transcription factor Seq+ 7531 ChimerSeq FusionScan TCGA_RNA-Seq TMED3-KIAA1024 TMED3 chr15 79606347 + KIAA1024 chr15 79748439 + Exonic hg19 LUAD TCGA-86-7955 2 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 7532 ChimerSeq FusionScan TCGA_RNA-Seq ANLN-EEPD1 ANLN chr7 36436028 + EEPD1 chr7 36336601 + Exonic hg19 LUAD TCGA-44-6778 2 In-Frame Intra-chr p14.2 p14.2 Seq+ 7533 ChimerSeq FusionScan TCGA_RNA-Seq THRAP3-ERI3 THRAP3 chr1 36690106 + ERI3 chr1 44778900 - Exonic hg19 LUAD TCGA-71-8520 4 5'UTR-CDS Intra-chr p34.3 p34.1 Seq+ 7534 ChimerSeq FusionScan TCGA_RNA-Seq SNIP1-PUM1 SNIP1 chr1 38018245 - PUM1 chr1 31501711 - Exonic hg19 LUAD TCGA-71-8520 2 In-Frame Intra-chr p34.3 p35.2 Seq+ 7535 ChimerSeq FusionScan TCGA_RNA-Seq RARA-STAC2 RARA chr17 38474700 + STAC2 chr17 37374426 - Exonic hg19 LUAD TCGA-55-1592 2 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q12 Seq+ 7536 ChimerSeq FusionScan TCGA_RNA-Seq ASAP1-SAMD12 ASAP1 chr8 131370262 - SAMD12 chr8 119209971 - Exonic hg19 LUAD TCGA-35-4122 2 Out-of-Frame Intra-chr q24.22 q24.12 Seq+ 7537 ChimerSeq FusionScan TCGA_RNA-Seq THUMPD2-VSNL1 THUMPD2 chr2 40006253 - VSNL1 chr2 17830676 + Exonic hg19 LUAD TCGA-55-A4DG 2 In-Frame Intra-chr p22.1 p24.2 Tumor suppressor gene Seq+ 7538 ChimerSeq FusionScan TCGA_RNA-Seq SMURF2-LRRC37A3 SMURF2 chr17 62657946 - LRRC37A3 chr17 62852007 - Exonic hg19 LUAD TCGA-78-8662 5 Out-of-Frame Intra-chr q24.1 q24.1 Seq+ 7539 ChimerSeq FusionScan TCGA_RNA-Seq LMAN2-F12 LMAN2 chr5 176761284 - F12 chr5 176831091 - Exonic hg19 LUAD TCGA-55-8299 2 In-Frame Intra-chr q35.3 q35.3 Seq+ 7540 ChimerSeq FusionScan TCGA_RNA-Seq RRBP1-TASP1 RRBP1 chr20 17614104 - TASP1 chr20 13398168 - Exonic hg19 LUAD TCGA-91-6831 3 Out-of-Frame Intra-chr p12.1 p12.1 Seq+ 7541 ChimerSeq FusionScan TCGA_RNA-Seq SNAI1-PFDN4 SNAI1 chr20 48600888 + PFDN4 chr20 52835557 + Exonic hg19 LUAD TCGA-91-6831 2 Out-of-Frame Intra-chr q13.13 Transcription factor q13.2 Seq+ 7542 ChimerSeq FusionScan TCGA_RNA-Seq TANC2-SPAG9 TANC2 chr17 61086987 + SPAG9 chr17 49157065 - Exonic hg19 LUAD TCGA-83-5908 4 Out-of-Frame Intra-chr q23.2 q21.33 Seq+ 7543 ChimerSeq FusionScan TCGA_RNA-Seq BRD9-TPPP BRD9 chr5 886706 - TPPP chr5 666238 - Exonic hg19 LUAD TCGA-83-5908 2 In-Frame Intra-chr p15.33 p15.33 Seq+ 7544 ChimerSeq FusionScan TCGA_RNA-Seq EARS2-VMP1 EARS2 chr16 23555834 - VMP1 chr17 57915655 + Exonic hg19 LUAD TCGA-83-5908 2 In-Frame Inter-chr p12.2 q23.1 Seq+ 7545 ChimerSeq FusionScan TCGA_RNA-Seq TRAPPC8-ANK3 TRAPPC8 chr18 29522570 - ANK3 chr10 61965648 - Exonic hg19 LUAD TCGA-55-6971 3 Out-of-Frame Inter-chr q12.1 q21.2 Seq+ 7546 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHO2-ANKDD1A PLEKHO2 chr15 65153774 + ANKDD1A chr15 65214119 + Exonic hg19 LUAD TCGA-78-7633 2 In-Frame Intra-chr q22.31 q22.31 7547 ChimerSeq FusionScan TCGA_RNA-Seq EML4-ALK EML4 chr2 42491871 + ALK chr2 29446394 - Exonic hg19 LUAD TCGA-67-6215 5 In-Frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 7548 ChimerSeq FusionScan TCGA_RNA-Seq TFDP1-CUL4A TFDP1 chr13 114265377 + CUL4A chr13 113873258 + Exonic hg19 LUAD TCGA-55-8620 8 Out-of-Frame Intra-chr q34 Transcription factor q34 Seq+ 7549 ChimerSeq FusionScan TCGA_RNA-Seq TFDP1-PCID2 TFDP1 chr13 114240164 + PCID2 chr13 113839874 - Exonic hg19 LUAD TCGA-55-8620 4 Out-of-Frame Intra-chr q34 Transcription factor q34 Seq+ 7550 ChimerSeq FusionScan TCGA_RNA-Seq MED25-SIGLEC12 MED25 chr19 50322553 + SIGLEC12 chr19 51995083 - Exonic hg19 LUAD TCGA-55-8620 3 Out-of-Frame Intra-chr q13.33 q13.41 Seq+ 7551 ChimerSeq FusionScan TCGA_RNA-Seq CENPM-ITGB3BP CENPM chr22 42336142 - ITGB3BP chr1 63920639 - Exonic hg19 LUAD TCGA-55-8620 2 Out-of-Frame Inter-chr q13.2 p31.3 7552 ChimerSeq FusionScan TCGA_RNA-Seq SLC16A14-SP110 SLC16A14 chr2 230914476 - SP110 chr2 231076268 - Exonic hg19 LUAD TCGA-78-7536 8 In-Frame Intra-chr q36.3 q37.1 Transcription factor Seq+ 7553 ChimerSeq FusionScan TCGA_RNA-Seq SLC16A14-SP110 SLC16A14 chr2 230923809 - SP110 chr2 231076268 - Exonic hg19 LUAD TCGA-78-7536 6 In-Frame Intra-chr q36.3 q37.1 Transcription factor Seq+ 7554 ChimerSeq FusionScan TCGA_RNA-Seq EPS8-PRH2 EPS8 chr12 15942094 - PRH2 chr12 11082867 + Exonic hg19 LUAD TCGA-78-7536 3 5'UTR-CDS Intra-chr p12.3 Seq+ 7555 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R13B-BAG5 PPP1R13B chr14 104313635 - BAG5 chr14 104027529 - Exonic hg19 LUAD TCGA-78-7536 2 Out-of-Frame Intra-chr q32.33 q32.33 Seq+ 7556 ChimerSeq FusionScan TCGA_RNA-Seq TADA1-CADM3 TADA1 chr1 166838681 - CADM3 chr1 159169540 + Exonic hg19 LUAD TCGA-05-4432 2 In-Frame Intra-chr q24.1 q23.2 Tumor suppressor gene Seq+ 7557 ChimerSeq FusionScan TCGA_RNA-Seq E2F5-CA3 E2F5 chr8 86124439 + CA3 chr8 86351940 + Exonic hg19 LUAD TCGA-55-6975 4 In-Frame Intra-chr q21.2 Transcription factor q21.2 Seq+ 7558 ChimerSeq FusionScan TCGA_RNA-Seq ZDHHC20-MIPEP ZDHHC20 chr13 21987790 - MIPEP chr13 24330757 - Exonic hg19 LUAD TCGA-93-A4JO 4 Out-of-Frame Intra-chr q12.11 q12.12 Seq+ 7559 ChimerSeq FusionScan TCGA_RNA-Seq GALNT8-KCNA6 GALNT8 chr12 4874712 + KCNA6 chr12 4959903 + Exonic hg19 LUAD TCGA-MP-A4TA 2 CDS-3'UTR Intra-chr p13.32 7560 ChimerSeq FusionScan TCGA_RNA-Seq CPNE1-GNAS CPNE1 chr20 34252681 - GNAS chr20 57478585 + Exonic hg19 LUAD TCGA-55-8206 2 5'UTR-5'UTR Intra-chr q11.22 q13.32 Oncogene Seq+ 7561 ChimerSeq FusionScan TCGA_RNA-Seq DSTN-DZANK1 DSTN chr20 17550856 + DZANK1 chr20 18436005 - Exonic hg19 LUAD TCGA-55-8206 2 Out-of-Frame Intra-chr p12.1 p11.23 Seq+ 7562 ChimerSeq FusionScan TCGA_RNA-Seq HIF1A-PRKCH HIF1A chr14 62207906 + PRKCH chr14 61995792 + Exonic hg19 LUAD TCGA-44-2668 4 In-Frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 Seq+ 7563 ChimerSeq FusionScan TCGA_RNA-Seq CLPTM1-AP1M1 CLPTM1 chr19 45458724 + AP1M1 chr19 16337231 + Exonic hg19 LUAD TCGA-55-6972 2 In-Frame Intra-chr q13.32 p13.11 Seq+ 7564 ChimerSeq FusionScan TCGA_RNA-Seq CNOT2-RAB3IP CNOT2 chr12 70637260 + RAB3IP chr12 70206743 + Exonic hg19 LUAD TCGA-75-5122 2 5'UTR-CDS Intra-chr q15 q15 Seq+ 7565 ChimerSeq FusionScan TCGA_RNA-Seq OSBPL2-DLGAP4 OSBPL2 chr20 60813653 + DLGAP4 chr20 35152652 + Exonic hg19 LUAD TCGA-75-6211 3 5'UTR-CDS Intra-chr q13.33 q11.23 Seq+ 7566 ChimerSeq FusionScan TCGA_RNA-Seq SPINT2-LGALS7B SPINT2 chr19 38778575 + LGALS7B chr19 39280255 + Exonic hg19 LUAD TCGA-64-5778 2 Out-of-Frame Intra-chr q13.2 Tumor suppressor gene Seq+ 7567 ChimerSeq FusionScan TCGA_RNA-Seq ERC1-VWF ERC1 chr12 1372331 + VWF chr12 6085426 - Exonic hg19 LUAD TCGA-05-4415 2 In-Frame Intra-chr p13.31 Seq+ 7568 ChimerSeq FusionScan TCGA_RNA-Seq ATP2A2-IFT81 ATP2A2 chr12 110720600 + IFT81 chr12 110628724 + Exonic hg19 LUAD TCGA-78-7161 5 In-Frame Intra-chr q24.11 q24.11 Seq+ 7569 ChimerSeq FusionScan TCGA_RNA-Seq RAPGEF6-SUSD4 RAPGEF6 chr5 130928075 - SUSD4 chr1 223408442 - Exonic hg19 LUAD TCGA-78-7161 3 Out-of-Frame Inter-chr q31.1 q41 Seq+ 7570 ChimerSeq FusionScan TCGA_RNA-Seq PAK1-CNIH4 PAK1 chr11 77103375 - CNIH4 chr1 224553580 + Exonic hg19 LUAD TCGA-78-7161 2 Out-of-Frame Inter-chr q14.1 STE:STE20 q42.11 Seq+ 7571 ChimerSeq FusionScan TCGA_RNA-Seq C16orf57-CCDC135 C16orf57 chr16 58036549 + CCDC135 chr16 57761210 + Exonic hg19 LUAD TCGA-L4-A4E5 2 Out-of-Frame Intra-chr Seq+ 7572 ChimerSeq FusionScan TCGA_RNA-Seq EFR3A-PHF20L1 EFR3A chr8 132916569 + PHF20L1 chr8 133823290 + Exonic hg19 LUAD TCGA-78-8640 2 In-Frame Intra-chr q24.22 q24.22 Seq+ 7573 ChimerSeq FusionScan TCGA_RNA-Seq EFR3A-ZFAT EFR3A chr8 132999949 + ZFAT chr8 135577664 - Exonic hg19 LUAD TCGA-78-8640 2 In-Frame Intra-chr q24.22 q24.22 Transcription factor Seq+ 7574 ChimerSeq FusionScan TCGA_RNA-Seq CTNND1-ZDHHC5 CTNND1 chr11 57529518 + ZDHHC5 chr11 57466030 + Exonic hg19 LUAD TCGA-78-8640 2 5'UTR-CDS Intra-chr q12.1 Tumor suppressor gene q12.1 Seq+ 7575 ChimerSeq FusionScan TCGA_RNA-Seq GALNT8-KCNA6 GALNT8 chr12 4874712 + KCNA6 chr12 4959903 + Exonic hg19 LUAD TCGA-78-8640 2 CDS-3'UTR Intra-chr p13.32 7576 ChimerSeq FusionScan TCGA_RNA-Seq NRF1-SKA2 NRF1 chr7 129251665 + SKA2 chr17 57208728 - Exonic hg19 LUAD TCGA-78-8640 2 5'UTR-CDS Inter-chr q32.2 Tumor suppressor gene Transcription factor q22 7577 ChimerSeq FusionScan TCGA_RNA-Seq ARRB1-GDPD5 ARRB1 chr11 74993005 - GDPD5 chr11 75173934 - Exonic hg19 LUAD TCGA-MP-A4TC 2 In-Frame Intra-chr q13.4 q13.5 Seq+ 7578 ChimerSeq FusionScan TCGA_RNA-Seq THRAP3-CAPZB THRAP3 chr1 36690106 + CAPZB chr1 19705147 - Exonic hg19 LUAD TCGA-49-4507 5 5'UTR-CDS Intra-chr p34.3 p36.13 Seq+ 7579 ChimerSeq FusionScan TCGA_RNA-Seq AP3D1-REXO1 AP3D1 chr19 2108685 - REXO1 chr19 1816812 - Exonic hg19 LUAD TCGA-49-4507 4 In-Frame Intra-chr p13.3 p13.3 Seq+ 7580 ChimerSeq FusionScan TCGA_RNA-Seq CYP24A1-RNF213 CYP24A1 chr20 52773707 - RNF213 chr17 78298829 + Exonic hg19 LUAD TCGA-MP-A4TJ 2 3'UTR-CDS Inter-chr q13.2 q25.3 Oncogene 7581 ChimerSeq FusionScan TCGA_RNA-Seq FHOD3-MYOM1 FHOD3 chr18 33952707 + MYOM1 chr18 3102628 - Exonic hg19 LUAD TCGA-86-8075 3 In-Frame Intra-chr q12.2 p11.31 Seq+ 7582 ChimerSeq FusionScan TCGA_RNA-Seq SECISBP2-NEDD4L SECISBP2 chr9 91956394 + NEDD4L chr18 56063398 + Exonic hg19 LUAD TCGA-86-8075 3 Out-of-Frame Inter-chr q22.2 q21.31 Tumor suppressor gene Seq+ 7583 ChimerSeq FusionScan TCGA_RNA-Seq NDUFV2-CHST9 NDUFV2 chr18 9119386 + CHST9 chr18 24524330 - Exonic hg19 LUAD TCGA-86-8075 2 Out-of-Frame Intra-chr p11.22 q11.2 Seq+ 7584 ChimerSeq FusionScan TCGA_RNA-Seq DAPK1-AGTPBP1 DAPK1 chr9 90114054 + AGTPBP1 chr9 88236200 - Exonic hg19 LUAD TCGA-86-8075 2 In-Frame Intra-chr q21.33 CAMK:DAPK Tumor suppressor gene q21.33 Seq+ 7585 ChimerSeq FusionScan TCGA_RNA-Seq PPP2CA-SKP1 PPP2CA chr5 133561450 - SKP1 chr5 133509713 - Exonic hg19 LUAD TCGA-49-4506 2 CDS-5'UTR Intra-chr q31.1 Tumor suppressor gene q31.1 7586 ChimerSeq FusionScan TCGA_RNA-Seq KIF5B-MET KIF5B chr10 32306070 - MET chr7 116411902 + Exonic hg19 LUAD TCGA-93-A4JN 2 In-Frame Inter-chr p11.22 q31.2 TK:Met Oncogene KB Pub Seq+ 7587 ChimerSeq FusionScan TCGA_RNA-Seq UBE2D2-CXXC5 UBE2D2 chr5 139003046 + CXXC5 chr5 139059948 + Exonic hg19 LUAD TCGA-64-5815 2 CDS-5'UTR Intra-chr q31.2 q31.2 Tumor suppressor gene Transcription factor Seq+ 7588 ChimerSeq FusionScan TCGA_RNA-Seq HIF1A-PRKCH HIF1A chr14 62207906 + PRKCH chr14 61995792 + Exonic hg19 LUAD TCGA-44-2668 4 In-Frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 Seq+ 7589 ChimerSeq FusionScan TCGA_RNA-Seq HEATR7B2-MRPS30 HEATR7B2 chr5 41017951 - MRPS30 chr5 44813207 + Exonic hg19 LUAD TCGA-55-1596 4 In-Frame Intra-chr p12 Seq+ 7590 ChimerSeq FusionScan TCGA_RNA-Seq MAP3K8-HEATR7B2 MAP3K8 chr10 30723307 + HEATR7B2 chr5 41019120 - Exonic hg19 LUAD TCGA-55-1596 3 5'UTR-CDS Inter-chr p11.23 STE:STE11 Tumor suppressor gene Seq+ 7591 ChimerSeq FusionScan TCGA_RNA-Seq GALNT8-KCNA6 GALNT8 chr12 4874712 + KCNA6 chr12 4959903 + Exonic hg19 LUAD TCGA-55-1596 2 CDS-3'UTR Intra-chr p13.32 7592 ChimerSeq FusionScan TCGA_RNA-Seq SF3B3-CDH15 SF3B3 chr16 70578436 + CDH15 chr16 89245823 + Exonic hg19 LUAD TCGA-44-7667 3 In-Frame Intra-chr q22.1 q24.3 Seq+ 7593 ChimerSeq FusionScan TCGA_RNA-Seq TGIF1-DDX19B TGIF1 chr18 3447795 + DDX19B chr16 70348804 + Exonic hg19 LUAD TCGA-44-7667 3 In-Frame Inter-chr p11.31 Transcription factor q22.1 Seq+ 7594 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD11-TGIF1 ANKRD11 chr16 89556652 - TGIF1 chr18 3456351 + Exonic hg19 LUAD TCGA-44-7667 2 5'UTR-5'UTR Inter-chr q24.3 p11.31 Transcription factor Seq+ 7595 ChimerSeq FusionScan TCGA_RNA-Seq GTF2F2-CTIF GTF2F2 chr13 45781640 + CTIF chr18 46284289 + Exonic hg19 LUAD TCGA-44-7667 2 In-Frame Inter-chr q14.12 Seq+ 7596 ChimerSeq FusionScan TCGA_RNA-Seq GOLGA4-CYB5A GOLGA4 chr3 37343823 + CYB5A chr18 71928179 - Exonic hg19 LUAD TCGA-67-4679 2 Out-of-Frame Inter-chr p22.2 q22.3 Tumor suppressor gene 7597 ChimerSeq FusionScan TCGA_RNA-Seq SPINT2-MAP4K1 SPINT2 chr19 38781215 + MAP4K1 chr19 39087777 - Exonic hg19 LUAD TCGA-55-A492 2 In-Frame Intra-chr q13.2 Tumor suppressor gene Tumor suppressor gene Seq+ 7598 ChimerSeq FusionScan TCGA_RNA-Seq CBL-VWA5A CBL chr11 119077322 + VWA5A chr11 123988203 + Exonic hg19 LUAD TCGA-38-4632 3 CDS-5'UTR Intra-chr q23.3 Oncogene Tumor suppressor gene q24.2 Tumor suppressor gene Seq+ 7599 ChimerSeq FusionScan TCGA_RNA-Seq RNF121-VWA5A RNF121 chr11 71640170 + VWA5A chr11 123988203 + Exonic hg19 LUAD TCGA-38-4632 2 5'UTR-5'UTR Intra-chr q13.4 q24.2 Tumor suppressor gene Seq+ 7600 ChimerSeq FusionScan TCGA_RNA-Seq TMC5-HN1 TMC5 chr16 19441962 + HN1 chr17 73144766 - Exonic hg19 LUAD TCGA-55-A493 3 5'UTR-5'UTR Inter-chr p12.3 Seq+ 7601 ChimerSeq FusionScan TCGA_RNA-Seq SMARCA4-DOCK6 SMARCA4 chr19 11130377 + DOCK6 chr19 11311728 - Exonic hg19 LUAD TCGA-55-8505 3 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 7602 ChimerSeq FusionScan TCGA_RNA-Seq IKZF5-UBC IKZF5 chr10 124768209 - UBC chr12 125398320 - Exonic hg19 LUAD TCGA-55-8505 2 5'UTR-5'UTR Inter-chr q26.13 Transcription factor q24.31 7603 ChimerSeq FusionScan TCGA_RNA-Seq RDH13-PPP6R1 RDH13 chr19 55568020 - PPP6R1 chr19 55758477 - Exonic hg19 LUAD TCGA-55-8505 2 CDS-5'UTR Intra-chr q13.42 Seq+ 7604 ChimerSeq FusionScan TCGA_RNA-Seq PEX14-KIF1B PEX14 chr1 10535059 + KIF1B chr1 10434373 + Exonic hg19 LUAD TCGA-05-4395 3 Out-of-Frame Intra-chr p36.22 p36.22 Tumor suppressor gene Seq+ 7605 ChimerSeq FusionScan TCGA_RNA-Seq KDM5A-RAE1 KDM5A chr12 459786 - RAE1 chr20 55940411 + Exonic hg19 LUAD TCGA-44-A47B 6 In-Frame Inter-chr p13.33 Tumor suppressor gene q13.31 Seq+ 7606 ChimerSeq FusionScan TCGA_RNA-Seq WSB1-FN3KRP WSB1 chr17 25621461 + FN3KRP chr17 80676781 + Exonic hg19 LUAD TCGA-44-A47B 2 Out-of-Frame Intra-chr q11.1 q25.3 Seq+ 7607 ChimerSeq FusionScan TCGA_RNA-Seq KRTCAP3-AVIL KRTCAP3 chr2 27666399 + AVIL chr12 58194995 - Exonic hg19 LUAD TCGA-44-A47B 2 In-Frame Inter-chr p23.3 q14.1 7608 ChimerSeq FusionScan TCGA_RNA-Seq LAPTM4B-MTDH LAPTM4B chr8 98817692 + MTDH chr8 98731276 + Exonic hg19 LUAD TCGA-64-5781 2 Out-of-Frame Intra-chr q22.1 q22.1 Seq+ 7609 ChimerSeq FusionScan TCGA_RNA-Seq UBE2K-FAM216B UBE2K chr4 39700010 + FAM216B chr13 43360898 + Exonic hg19 LUAD TCGA-86-A4P7 3 In-Frame Inter-chr p14 q14.11 Seq+ 7610 ChimerSeq FusionScan TCGA_RNA-Seq FBXL20-TTC17 FBXL20 chr17 37499432 - TTC17 chr11 43511788 + Exonic hg19 LUAD TCGA-86-A4P7 2 Out-of-Frame Inter-chr q12 p12 Seq+ 7611 ChimerSeq FusionScan TCGA_RNA-Seq VBP1-GABRA3 VBP1 chrX 154444852 + GABRA3 chrX 151393317 - Exonic hg19 LUAD TCGA-55-6712 4 Out-of-Frame Intra-chr q28 q28 Seq+ 7612 ChimerSeq FusionScan TCGA_RNA-Seq TBL1X-SHROOM2 TBL1X chrX 9469889 + SHROOM2 chrX 9841691 + Exonic hg19 LUAD TCGA-55-6712 3 5'UTR-CDS Intra-chr p22.31 p22.2 Seq+ 7613 ChimerSeq FusionScan TCGA_RNA-Seq AKIRIN1-MEAF6 AKIRIN1 chr1 39463983 + MEAF6 chr1 37967597 - Exonic hg19 LUAD TCGA-55-6712 3 In-Frame Intra-chr p34.3 p34.3 Seq+ 7614 ChimerSeq FusionScan TCGA_RNA-Seq MTM1-VBP1 MTM1 chrX 149787612 + VBP1 chrX 154448459 + Exonic hg19 LUAD TCGA-55-6712 2 In-Frame Intra-chr q28 q28 Seq+ 7615 ChimerSeq FusionScan TCGA_RNA-Seq CBFB-NUTF2 CBFB chr16 67070658 + NUTF2 chr16 67902242 + Exonic hg19 LUAD TCGA-78-8660 4 In-Frame Intra-chr q22.1 q22.1 Seq+ 7616 ChimerSeq FusionScan TCGA_RNA-Seq INPP5B-SF3A3 INPP5B chr1 38338601 - SF3A3 chr1 38435407 - Exonic hg19 LUAD TCGA-78-8660 3 In-Frame Intra-chr p34.3 p34.3 Seq+ 7617 ChimerSeq FusionScan TCGA_RNA-Seq GTF2A1-KIAA0391 GTF2A1 chr14 81682756 - KIAA0391 chr14 35649875 + Exonic hg19 LUAD TCGA-78-8660 3 In-Frame Intra-chr q31.1 q13.2 Seq+ 7618 ChimerSeq FusionScan TCGA_RNA-Seq SAFB2-LONP1 SAFB2 chr19 5598803 - LONP1 chr19 5708414 - Exonic hg19 LUAD TCGA-78-8660 2 In-Frame Intra-chr p13.3 Tumor suppressor gene Transcription factor p13.3 Seq+ 7619 ChimerSeq FusionScan TCGA_RNA-Seq RALY-DEFB123 RALY chr20 32581937 + DEFB123 chr20 30037831 + Exonic hg19 LUAD TCGA-78-8660 2 5'UTR-CDS Intra-chr q11.22 q11.21 Seq+ 7620 ChimerSeq FusionScan TCGA_RNA-Seq FAM177A1-KIAA0391 FAM177A1 chr14 35522657 + KIAA0391 chr14 35649875 + Exonic hg19 LUAD TCGA-91-6836 5 In-Frame Intra-chr q13.2 q13.2 Seq+ 7621 ChimerSeq FusionScan TCGA_RNA-Seq SSH2-NUFIP2 SSH2 chr17 28256955 - NUFIP2 chr17 27594548 - Exonic hg19 LUAD TCGA-91-6836 3 Out-of-Frame Intra-chr q11.2 q11.2 Seq+ 7622 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-RSBN1L PTPN12 chr7 77166962 + RSBN1L chr7 77365726 + Exonic hg19 LUAD TCGA-91-6836 3 Out-of-Frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 7623 ChimerSeq FusionScan TCGA_RNA-Seq DGKD-UGT1A4 DGKD chr2 234263320 + UGT1A4 chr2 234675679 + Exonic hg19 LUAD TCGA-91-6836 2 In-Frame Intra-chr q37.1 Seq+ 7624 ChimerSeq FusionScan TCGA_RNA-Seq CDH1-VPS4A CDH1 chr16 68772314 + VPS4A chr16 69349910 + Exonic hg19 LUAD TCGA-91-6836 2 Out-of-Frame Intra-chr q22.1 Oncogene Tumor suppressor gene q22.1 Seq+ 7625 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF3-ANO10 ARHGEF3 chr3 56807736 - ANO10 chr3 43474219 - Exonic hg19 LUAD TCGA-35-4123 4 In-Frame Intra-chr p14.3 p21.33 Seq+ 7626 ChimerSeq FusionScan TCGA_RNA-Seq MET-WNT2 MET chr7 116417523 + WNT2 chr7 116937930 - Exonic hg19 LUAD TCGA-44-7662 2 Out-of-Frame Intra-chr q31.2 TK:Met Oncogene q31.2 Seq+ 7627 ChimerSeq FusionScan TCGA_RNA-Seq TRIM33-RET TRIM33 chr1 114964057 - RET chr10 43612031 + Exonic hg19 LUAD TCGA-55-6543 2 In-Frame Inter-chr p13.2 Oncogene q11.21 TK:Ret Oncogene KB Pub Seq+ 7628 ChimerSeq FusionScan TCGA_RNA-Seq IPO7-TMEM41B IPO7 chr11 9406394 + TMEM41B chr11 9321248 - Exonic hg19 LUAD TCGA-69-7974 2 Out-of-Frame Intra-chr p15.4 p15.4 Seq+ 7629 ChimerSeq FusionScan TCGA_RNA-Seq GALNT8-KCNA6 GALNT8 chr12 4874712 + KCNA6 chr12 4959903 + Exonic hg19 LUAD TCGA-NJ-A55R 2 CDS-3'UTR Intra-chr p13.32 7630 ChimerSeq FusionScan TCGA_RNA-Seq SLC35E2-GNB1 SLC35E2 chr1 1675689 - GNB1 chr1 1756938 - Exonic hg19 LUAD TCGA-55-6985 2 5'UTR-5'UTR Intra-chr p36.33 p36.33 Seq+ 7631 ChimerSeq FusionScan TCGA_RNA-Seq ATP11A-C13orf35 ATP11A chr13 113439571 + C13orf35 chr13 113337587 + Exonic hg19 LUAD TCGA-44-2655 2 Out-of-Frame Intra-chr q34 Seq+ 7632 ChimerSeq FusionScan TCGA_RNA-Seq SLU7-FAM204A SLU7 chr5 159840905 - FAM204A chr10 120070825 - Exonic hg19 LUAD TCGA-55-A491 2 In-Frame Inter-chr q33.3 q26.11 7633 ChimerSeq FusionScan TCGA_RNA-Seq EEA1-UBE2N EEA1 chr12 93285404 - UBE2N chr12 93805075 - Exonic hg19 LUAD TCGA-55-A491 2 In-Frame Intra-chr q22 Transcription factor q22 Seq+ 7634 ChimerSeq FusionScan TCGA_RNA-Seq LMO7-ITGBL1 LMO7 chr13 76412332 + ITGBL1 chr13 102220049 + Exonic hg19 LUAD TCGA-69-7979 4 In-Frame Intra-chr q22.2 q33.1 Seq+ 7635 ChimerSeq FusionScan TCGA_RNA-Seq FARP1-UCHL3 FARP1 chr13 98795746 + UCHL3 chr13 76134888 + Exonic hg19 LUAD TCGA-69-7979 4 5'UTR-CDS Intra-chr q32.2 q22.2 Seq+ 7636 ChimerSeq FusionScan TCGA_RNA-Seq S1PR2-RAVER1 S1PR2 chr19 10341879 - RAVER1 chr19 10429916 - Exonic hg19 LUAD TCGA-69-7979 4 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 7637 ChimerSeq FusionScan TCGA_RNA-Seq ACSL3-PHGDH ACSL3 chr2 223725976 + PHGDH chr1 120263792 + Exonic hg19 LUAD TCGA-69-7979 3 5'UTR-CDS Inter-chr q36.1 p12 Seq+ 7638 ChimerSeq FusionScan TCGA_RNA-Seq DOCK9-SPACA7 DOCK9 chr13 99532800 - SPACA7 chr13 113086757 + Exonic hg19 LUAD TCGA-69-7979 3 Out-of-Frame Intra-chr q32.3 Seq+ 7639 ChimerSeq FusionScan TCGA_RNA-Seq EIF3L-VPS13B EIF3L chr22 38251651 + VPS13B chr8 100861003 + Exonic hg19 LUAD TCGA-69-7979 2 Out-of-Frame Inter-chr q13.1 q22.2 Seq+ 7640 ChimerSeq FusionScan TCGA_RNA-Seq CBFA2T2-DOK5 CBFA2T2 chr20 32078107 + DOK5 chr20 53259996 + Exonic hg19 LUAD TCGA-MP-A4SV 2 Out-of-Frame Intra-chr q11.21 q13.2 Seq+ 7641 ChimerSeq FusionScan TCGA_RNA-Seq KDM4B-AKAP8L KDM4B chr19 5144913 + AKAP8L chr19 15491423 - Exonic hg19 LUAD TCGA-49-4486 3 In-Frame Intra-chr p13.3 p13.12 Transcription factor Seq+ 7642 ChimerSeq FusionScan TCGA_RNA-Seq ADCK4-AKAP8 ADCK4 chr19 41201893 - AKAP8 chr19 15469873 - Exonic hg19 LUAD TCGA-49-4486 2 In-Frame Intra-chr Atypical:ABC1 p13.12 Transcription factor Seq+ 7643 ChimerSeq FusionScan TCGA_RNA-Seq STARD3-GSDMB STARD3 chr17 37793484 + GSDMB chr17 38061217 - Exonic hg19 LUAD TCGA-38-4630 7 5'UTR-CDS Intra-chr q12 q21.1 Seq+ 7644 ChimerSeq FusionScan TCGA_RNA-Seq WDR34-ZER1 WDR34 chr9 131402969 - ZER1 chr9 131505024 - Exonic hg19 LUAD TCGA-38-4630 6 In-Frame Intra-chr q34.11 q34.11 Seq+ 7645 ChimerSeq FusionScan TCGA_RNA-Seq SPEN-CERS4 SPEN chr1 16174645 + CERS4 chr19 8315959 + Exonic hg19 LUAD TCGA-38-4630 5 CDS-5'UTR Inter-chr p36.21 Transcription factor p13.2 Seq+ 7646 ChimerSeq FusionScan TCGA_RNA-Seq CLIC4-GRHL3 CLIC4 chr1 25072116 + GRHL3 chr1 24671386 + Exonic hg19 LUAD TCGA-38-4630 5 In-Frame Intra-chr p36.11 p36.11 Transcription factor Seq+ 7647 ChimerSeq FusionScan TCGA_RNA-Seq SSR2-KIAA0907 SSR2 chr1 155990678 - KIAA0907 chr1 155903640 - Exonic hg19 LUAD TCGA-38-4630 5 5'UTR-CDS Intra-chr q22 q22 7648 ChimerSeq FusionScan TCGA_RNA-Seq TOP3A-MYO18A TOP3A chr17 18202872 - MYO18A chr17 27430682 - Exonic hg19 LUAD TCGA-38-4630 4 In-Frame Intra-chr q11.2 Oncogene Seq+ 7649 ChimerSeq FusionScan TCGA_RNA-Seq TGFBRAP1-FHL2 TGFBRAP1 chr2 105912812 - FHL2 chr2 106002997 - Exonic hg19 LUAD TCGA-38-4630 4 CDS-5'UTR Intra-chr q12.2 q12.2 Seq+ 7650 ChimerSeq FusionScan TCGA_RNA-Seq ITPK1-BTBD7 ITPK1 chr14 93418290 - BTBD7 chr14 93717998 - Exonic hg19 LUAD TCGA-38-4630 3 In-Frame Intra-chr Seq+ 7651 ChimerSeq FusionScan TCGA_RNA-Seq EIF4H-ELN EIF4H chr7 73604636 + ELN chr7 73449693 + Exonic hg19 LUAD TCGA-38-4630 3 In-Frame Intra-chr q11.23 q11.23 Seq+ 7652 ChimerSeq FusionScan TCGA_RNA-Seq APOPT1-MARK3 APOPT1 chr14 104040507 + MARK3 chr14 103941329 + Exonic hg19 LUAD TCGA-38-4630 3 In-Frame Intra-chr q32.33 q32.32 CAMK:CAMKL Seq+ 7653 ChimerSeq FusionScan TCGA_RNA-Seq WBP1L-SUFU WBP1L chr10 104536174 + SUFU chr10 104352338 + Exonic hg19 LUAD TCGA-38-4630 3 Out-of-Frame Intra-chr q24.32 q24.32 Oncogene Tumor suppressor gene Seq+ 7654 ChimerSeq FusionScan TCGA_RNA-Seq BCAP31-PDZD4 BCAP31 chrX 152986326 - PDZD4 chrX 153074050 - Exonic hg19 LUAD TCGA-38-4630 3 Out-of-Frame Intra-chr q28 q28 Seq+ 7655 ChimerSeq FusionScan TCGA_RNA-Seq EIF4H-ELN EIF4H chr7 73604248 + ELN chr7 73449693 + Exonic hg19 LUAD TCGA-38-4630 3 In-Frame Intra-chr q11.23 q11.23 Seq+ 7656 ChimerSeq FusionScan TCGA_RNA-Seq DOCK3-SMARCC1 DOCK3 chr3 50712731 + SMARCC1 chr3 47663831 - Exonic hg19 LUAD TCGA-38-4630 3 Out-of-Frame Intra-chr p21.2 p21.31 Tumor suppressor gene Seq+ 7657 ChimerSeq FusionScan TCGA_RNA-Seq SPEN-CERS4 SPEN chr1 16174645 + CERS4 chr19 8319382 + Exonic hg19 LUAD TCGA-38-4630 3 In-Frame Inter-chr p36.21 Transcription factor p13.2 Seq+ 7658 ChimerSeq FusionScan TCGA_RNA-Seq SLC1A3-C20orf196 SLC1A3 chr5 36608706 + C20orf196 chr20 5753507 + Exonic hg19 LUAD TCGA-38-4630 3 CDS-5'UTR Inter-chr p13.2 p12.3 Seq+ 7659 ChimerSeq FusionScan TCGA_RNA-Seq OSBPL2-TPX2 OSBPL2 chr20 60847315 + TPX2 chr20 30330343 + Exonic hg19 LUAD TCGA-38-4630 2 CDS-5'UTR Intra-chr q13.33 q11.21 Seq+ 7660 ChimerSeq FusionScan TCGA_RNA-Seq PHF12-PLXDC1 PHF12 chr17 27277082 - PLXDC1 chr17 37265644 - Exonic hg19 LUAD TCGA-38-4630 2 Out-of-Frame Intra-chr q11.2 q12 Seq+ 7661 ChimerSeq FusionScan TCGA_RNA-Seq FRMD5-MFAP1 FRMD5 chr15 44487150 - MFAP1 chr15 44109646 - Exonic hg19 LUAD TCGA-38-4630 2 Out-of-Frame Intra-chr q15.3 q15.3 Seq+ 7662 ChimerSeq FusionScan TCGA_RNA-Seq RBM17-PFKFB3 RBM17 chr10 6154324 + PFKFB3 chr10 6255585 + Exonic hg19 LUAD TCGA-38-4630 2 In-Frame Intra-chr p15.1 p15.1 Seq+ 7663 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1-GSDMB WHSC1 chr4 1957915 + GSDMB chr17 38068750 - Exonic hg19 LUAD TCGA-38-4630 2 In-Frame Inter-chr Oncogene q21.1 Seq+ 7664 ChimerSeq FusionScan TCGA_RNA-Seq USP6NL-ARMC3 USP6NL chr10 11531100 - ARMC3 chr10 23297743 + Exonic hg19 LUAD TCGA-38-4630 2 Out-of-Frame Intra-chr p14 p12.2 Seq+ 7665 ChimerSeq FusionScan TCGA_RNA-Seq SUV420H1-MTL5 SUV420H1 chr11 67980604 - MTL5 chr11 68480875 - Exonic hg19 LUAD TCGA-38-4630 2 5'UTR-CDS Intra-chr Seq+ 7666 ChimerSeq FusionScan TCGA_RNA-Seq CC2D1A-RNF207 CC2D1A chr19 14030015 + RNF207 chr1 6278348 + Exonic hg19 LUAD TCGA-38-4630 2 Out-of-Frame Inter-chr p13.12 Transcription factor p36.31 Seq+ 7667 ChimerSeq FusionScan TCGA_RNA-Seq HEATR7A-ZNF623 HEATR7A chr8 145255444 + ZNF623 chr8 144732067 + Exonic hg19 LUAD TCGA-38-4630 2 CDS-5'UTR Intra-chr Transcription factor Seq+ 7668 ChimerSeq FusionScan TCGA_RNA-Seq RCCD1-BLM RCCD1 chr15 91500955 + BLM chr15 91328150 + Exonic hg19 LUAD TCGA-38-4630 2 In-Frame Intra-chr q26.1 q26.1 Oncogene Tumor suppressor gene Seq+ 7669 ChimerSeq FusionScan TCGA_RNA-Seq RCCD1-BLM RCCD1 chr15 91498178 + BLM chr15 91328150 + Exonic hg19 LUAD TCGA-38-4630 2 5'UTR-CDS Intra-chr q26.1 q26.1 Oncogene Tumor suppressor gene Seq+ 7670 ChimerSeq FusionScan TCGA_RNA-Seq UNC45A-BLM UNC45A chr15 91493845 + BLM chr15 91298040 + Exonic hg19 LUAD TCGA-38-4630 2 In-Frame Intra-chr q26.1 q26.1 Oncogene Tumor suppressor gene Seq+ 7671 ChimerSeq FusionScan TCGA_RNA-Seq PDLIM1-SORBS1 PDLIM1 chr10 97006971 - SORBS1 chr10 97200937 - Exonic hg19 LUAD TCGA-38-4630 2 CDS-5'UTR Intra-chr q23.33 q24.1 Seq+ 7672 ChimerSeq FusionScan TCGA_RNA-Seq WBP1L-SUFU WBP1L chr10 104503900 + SUFU chr10 104352338 + Exonic hg19 LUAD TCGA-38-4630 2 Out-of-Frame Intra-chr q24.32 q24.32 Oncogene Tumor suppressor gene Seq+ 7673 ChimerSeq FusionScan TCGA_RNA-Seq RCCD1-BLM RCCD1 chr15 91498178 + BLM chr15 91326051 + Exonic hg19 LUAD TCGA-38-4630 2 5'UTR-CDS Intra-chr q26.1 q26.1 Oncogene Tumor suppressor gene Seq+ 7674 ChimerSeq FusionScan TCGA_RNA-Seq BANP-SLC7A5 BANP chr16 87985121 + SLC7A5 chr16 87874761 - Exonic hg19 LUAD TCGA-38-4630 2 5'UTR-CDS Intra-chr q24.2 Tumor suppressor gene q24.2 7675 ChimerSeq FusionScan TCGA_RNA-Seq NUP210-FBLN2 NUP210 chr3 13393378 - FBLN2 chr3 13679061 + Exonic hg19 LUAD TCGA-38-4630 2 Out-of-Frame Intra-chr p25.1 p25.1 Seq+ 7676 ChimerSeq FusionScan TCGA_RNA-Seq MED13L-COL23A1 MED13L chr12 116714864 - COL23A1 chr5 177690325 - Exonic hg19 LUAD TCGA-93-A4JQ 3 In-Frame Inter-chr q24.21 q35.3 Seq+ 7677 ChimerSeq FusionScan TCGA_RNA-Seq PLAA-PTPLAD2 PLAA chr9 26946894 - PTPLAD2 chr9 21029397 - Exonic hg19 LUAD TCGA-93-A4JQ 3 In-Frame Intra-chr p21.2 Tumor suppressor gene Seq+ 7678 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992064 + VMP1 chr17 57842331 + Exonic hg19 LUAD TCGA-93-A4JQ 3 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 7679 ChimerSeq FusionScan TCGA_RNA-Seq TEC-NCAM2 TEC chr4 48271768 - NCAM2 chr21 22746182 + Exonic hg19 LUAD TCGA-93-A4JQ 2 5'UTR-CDS Inter-chr p11 TK:Tec Tumor suppressor gene q21.1 Tumor suppressor gene Seq+ 7680 ChimerSeq FusionScan TCGA_RNA-Seq ATAD2-LRP12 ATAD2 chr8 124408426 - LRP12 chr8 105521302 - Exonic hg19 LUAD TCGA-93-A4JQ 2 Out-of-Frame Intra-chr q24.13 q22.3 Seq+ 7681 ChimerSeq FusionScan TCGA_RNA-Seq TIFAB-H2AFY TIFAB chr5 134787898 - H2AFY chr5 134724816 - Exonic hg19 LUAD TCGA-L4-A4E6 2 5'UTR-5'UTR Intra-chr q31.1 q31.1 7682 ChimerSeq FusionScan TCGA_RNA-Seq KDM2A-DDR2 KDM2A chr11 67007840 + DDR2 chr1 162749901 + Exonic hg19 LUAD TCGA-86-8054 2 In-Frame Inter-chr q13.2 Transcription factor q23.3 TK:DDR Oncogene Tumor suppressor gene Seq+ 7683 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LUAD TCGA-86-8054 2 Out-of-Frame Intra-chr q22.2 q22.2 7684 ChimerSeq FusionScan TCGA_RNA-Seq GPBP1-STAG2 GPBP1 chr5 56527148 + STAG2 chrX 123156380 + Exonic hg19 LUAD TCGA-86-8054 2 5'UTR-5'UTR Inter-chr q11.2 Transcription factor q25 Oncogene 7685 ChimerSeq FusionScan TCGA_RNA-Seq CELSR1-CD52 CELSR1 chr22 46859603 - CD52 chr1 26646661 + Exonic hg19 LUAD TCGA-62-8394 4 Out-of-Frame Inter-chr q13.31 p36.11 Seq+ 7686 ChimerSeq FusionScan TCGA_RNA-Seq ERBB3-BCAR4 ERBB3 chr12 56493529 + BCAR4 chr16 11915612 - Exonic hg19 LUAD TCGA-05-5429 3 CDS-3'UTR Inter-chr q13.2 Oncogene p13.13 Seq+ 7687 ChimerSeq FusionScan TCGA_RNA-Seq ERBB3-BCAR4 ERBB3 chr12 56493813 + BCAR4 chr16 11914154 - Exonic hg19 LUAD TCGA-05-5429 3 CDS-3'UTR Inter-chr q13.2 Oncogene p13.13 Seq+ 7688 ChimerSeq FusionScan TCGA_RNA-Seq ERBB3-BCAR4 ERBB3 chr12 56493813 + BCAR4 chr16 11915612 - Exonic hg19 LUAD TCGA-05-5429 2 CDS-3'UTR Inter-chr q13.2 Oncogene p13.13 Seq+ 7689 ChimerSeq FusionScan TCGA_RNA-Seq NCSTN-SPRR2G NCSTN chr1 160324080 + SPRR2G chr1 153122607 - Exonic hg19 LUAD TCGA-97-A4M3 4 CDS-5'UTR Intra-chr q23.2 q21.3 Seq+ 7690 ChimerSeq FusionScan TCGA_RNA-Seq DPP3-FKBP2 DPP3 chr11 66272245 + FKBP2 chr11 64011312 + Exonic hg19 LUAD TCGA-97-A4M3 3 In-Frame Intra-chr q13.2 q13.1 Seq+ 7691 ChimerSeq FusionScan TCGA_RNA-Seq FAT3-DPP3 FAT3 chr11 92088570 + DPP3 chr11 66276549 + Exonic hg19 LUAD TCGA-97-A4M3 2 In-Frame Intra-chr q13.2 Seq+ 7692 ChimerSeq FusionScan TCGA_RNA-Seq POLB-UVRAG POLB chr8 42202537 + UVRAG chr11 75719850 + Exonic hg19 LUAD TCGA-95-8039 2 In-Frame Inter-chr p11.21 q13.5 Tumor suppressor gene Seq+ 7693 ChimerSeq FusionScan TCGA_RNA-Seq B4GALT3-BCAS3 B4GALT3 chr1 161147212 - BCAS3 chr17 59161827 + Exonic hg19 LUAD TCGA-55-8511 7 5'UTR-CDS Inter-chr q23.3 q23.2 Seq+ 7694 ChimerSeq FusionScan TCGA_RNA-Seq PTK2-TRAPPC9 PTK2 chr8 142011223 - TRAPPC9 chr8 140744445 - Exonic hg19 LUAD TCGA-55-8511 2 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 7695 ChimerSeq FusionScan TCGA_RNA-Seq IQGAP2-C12orf35 IQGAP2 chr5 75699416 + C12orf35 chr12 32145311 + Exonic hg19 LUAD TCGA-86-8359 2 In-Frame Inter-chr q13.3 Tumor suppressor gene 7696 ChimerSeq FusionScan TCGA_RNA-Seq GAS7-MYH1 GAS7 chr17 10101524 - MYH1 chr17 10415863 - Exonic hg19 LUAD TCGA-97-8172 2 In-Frame Intra-chr p13.1 p13.1 Seq+ 7697 ChimerSeq FusionScan TCGA_RNA-Seq CHD6-C20orf152 CHD6 chr20 40246978 - C20orf152 chr20 34560550 + Exonic hg19 LUAD TCGA-49-4501 2 5'UTR-CDS Intra-chr q12 Seq+ 7698 ChimerSeq FusionScan TCGA_RNA-Seq FAM60A-CD27 FAM60A chr12 31478957 - CD27 chr12 6554589 + Exonic hg19 LUAD TCGA-64-5779 5 5'UTR-3'UTR Intra-chr p13.31 Seq+ 7699 ChimerSeq FusionScan TCGA_RNA-Seq TMEM132D-STX2 TMEM132D chr12 130387805 - STX2 chr12 131297576 - Exonic hg19 LUAD TCGA-55-7907 2 In-Frame Intra-chr q24.33 q24.33 Seq+ 7700 ChimerSeq FusionScan TCGA_RNA-Seq HELZ-CACNG4 HELZ chr17 65116520 - CACNG4 chr17 65026581 + Exonic hg19 LUAD TCGA-78-7146 2 In-Frame Intra-chr q24.2 q24.2 Seq+ 7701 ChimerSeq FusionScan TCGA_RNA-Seq F11R-NOS1AP F11R chr1 160990799 - NOS1AP chr1 162324976 + Exonic hg19 LUAD TCGA-78-7146 2 In-Frame Intra-chr q23.3 q23.3 Seq+ 7702 ChimerSeq FusionScan TCGA_RNA-Seq SLC12A7-RASGEF1C SLC12A7 chr5 1111982 - RASGEF1C chr5 179565058 - Exonic hg19 LUAD TCGA-95-A4VK 2 CDS-5'UTR Intra-chr p15.33 q35.3 Seq+ 7703 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57760623 + VMP1 chr17 57886156 + Exonic hg19 LUAD TCGA-78-7542 3 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 7704 ChimerSeq FusionScan TCGA_RNA-Seq PRPF4B-CDYL PRPF4B chr6 4021700 + CDYL chr6 4935748 + Exonic hg19 LUAD TCGA-78-7542 2 Out-of-Frame Intra-chr p25.2 p25.1 Seq+ 7705 ChimerSeq FusionScan TCGA_RNA-Seq RERE-GPR157 RERE chr1 8482786 - GPR157 chr1 9171548 - Exonic hg19 LUAD TCGA-55-7574 2 Out-of-Frame Intra-chr p36.23 p36.22 Seq+ 7706 ChimerSeq FusionScan TCGA_RNA-Seq TRIP12-DNER TRIP12 chr2 230642030 - DNER chr2 230456604 - Exonic hg19 LUAD TCGA-50-5930 2 In-Frame Intra-chr q36.3 q36.3 Seq+ 7707 ChimerSeq FusionScan TCGA_RNA-Seq SPDEF-VSTM2B SPDEF chr6 34523705 - VSTM2B chr19 30054752 + Exonic hg19 LUAD TCGA-55-7913 4 5'UTR-CDS Inter-chr p21.31 Transcription factor q12 Seq+ 7708 ChimerSeq FusionScan TCGA_RNA-Seq C6orf106-NUDT3 C6orf106 chr6 34614377 - NUDT3 chr6 34309749 - Exonic hg19 LUAD TCGA-55-7913 2 Out-of-Frame Intra-chr p21.31 p21.31 Seq+ 7709 ChimerSeq FusionScan TCGA_RNA-Seq PTRH2-VMP1 PTRH2 chr17 57784731 - VMP1 chr17 57842331 + Exonic hg19 LUAD TCGA-64-1679 2 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 7710 ChimerSeq FusionScan TCGA_RNA-Seq AHNAK-STIP1 AHNAK chr11 62314131 - STIP1 chr11 63960549 + Exonic hg19 LUAD TCGA-97-7937 6 5'UTR-CDS Intra-chr q12.3 Tumor suppressor gene q13.1 Seq+ 7711 ChimerSeq FusionScan TCGA_RNA-Seq RNF10-FBXO21 RNF10 chr12 120972771 + FBXO21 chr12 117615446 - Exonic hg19 LUAD TCGA-97-7937 2 Out-of-Frame Intra-chr q24.31 q24.22 Seq+ 7712 ChimerSeq FusionScan TCGA_RNA-Seq PUM1-NKAIN1 PUM1 chr1 31532050 - NKAIN1 chr1 31661034 - Exonic hg19 LUAD TCGA-38-4631 3 In-Frame Intra-chr p35.2 p35.2 Seq+ 7713 ChimerSeq FusionScan TCGA_RNA-Seq EEF2K-KCTD1 EEF2K chr16 22268706 + KCTD1 chr18 24081214 - Exonic hg19 LUAD TCGA-78-7150 2 Out-of-Frame Inter-chr p12.2 q11.2 Seq+ 7714 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 58007535 + VMP1 chr17 57915655 + Exonic hg19 LUAD TCGA-50-6592 4 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 7715 ChimerSeq FusionScan TCGA_RNA-Seq ATP2C1-NEK11 ATP2C1 chr3 130660543 + NEK11 chr3 131068400 + Exonic hg19 LUAD TCGA-50-6592 2 Out-of-Frame Intra-chr q22.1 q22.1 Other:NEK Seq+ 7716 ChimerSeq FusionScan TCGA_RNA-Seq GALNT8-KCNA6 GALNT8 chr12 4874712 + KCNA6 chr12 4959903 + Exonic hg19 LUAD TCGA-38-4625 3 CDS-3'UTR Intra-chr p13.32 7717 ChimerSeq FusionScan TCGA_RNA-Seq EML4-ALK EML4 chr2 42522656 + ALK chr2 29446394 - Exonic hg19 LUAD TCGA-78-7163 4 In-Frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 7718 ChimerSeq FusionScan TCGA_RNA-Seq ZBED4-C7orf10 ZBED4 chr22 50247637 + C7orf10 chr7 40277233 + Exonic hg19 LUAD TCGA-38-4628 2 5'UTR-CDS Inter-chr q13.33 Transcription factor Seq+ 7719 ChimerSeq FusionScan TCGA_RNA-Seq AGFG1-MFF AGFG1 chr2 228389631 + MFF chr2 228220392 + Exonic hg19 LUAD TCGA-62-A471 2 Out-of-Frame Intra-chr q36.3 q36.3 Seq+ 7720 ChimerSeq FusionScan TCGA_RNA-Seq AGFG1-MFF AGFG1 chr2 228395926 + MFF chr2 228220392 + Exonic hg19 LUAD TCGA-62-A471 2 Out-of-Frame Intra-chr q36.3 q36.3 Seq+ 7721 ChimerSeq FusionScan TCGA_RNA-Seq SDHAF2-PPP1R32 SDHAF2 chr11 61197654 + PPP1R32 chr11 61249253 + Exonic hg19 LUAD TCGA-44-6776 2 CDS-5'UTR Intra-chr q12.2 q12.2 7722 ChimerSeq FusionScan TCGA_RNA-Seq SMARCC1-MAP4 SMARCC1 chr3 47702783 - MAP4 chr3 47919013 - Exonic hg19 LUAD TCGA-55-8085 2 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 7723 ChimerSeq FusionScan TCGA_RNA-Seq ARL17B-KANSL1 ARL17B chr17 44430185 - KANSL1 chr17 44172067 - Exonic hg19 LUAD TCGA-44-2662 2 3'UTR-3'UTR Intra-chr 7724 ChimerSeq FusionScan TCGA_RNA-Seq NFIX-GCDH NFIX chr19 13136366 + GCDH chr19 13002929 + Exonic hg19 LUAD TCGA-55-8506 3 In-Frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 7725 ChimerSeq FusionScan TCGA_RNA-Seq NUP107-SHD NUP107 chr12 69109520 + SHD chr19 4290443 + Exonic hg19 LUAD TCGA-55-8506 2 Out-of-Frame Inter-chr q15 p13.3 Seq+ 7726 ChimerSeq FusionScan TCGA_RNA-Seq LITAF-BCAR4 LITAF chr16 11680741 - BCAR4 chr16 11914154 - Exonic hg19 LUAD TCGA-55-8506 2 5'UTR-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 7727 ChimerSeq FusionScan TCGA_RNA-Seq PDLIM1-SORBS1 PDLIM1 chr10 97031389 - SORBS1 chr10 97081778 - Exonic hg19 LUAD TCGA-69-7978 2 Out-of-Frame Intra-chr q23.33 q24.1 Seq+ 7728 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992064 + VMP1 chr17 57886156 + Exonic hg19 LUAD TCGA-69-7978 2 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 7729 ChimerSeq FusionScan TCGA_RNA-Seq IL13RA1-WDR44 IL13RA1 chrX 117875119 + WDR44 chrX 117521302 + Exonic hg19 LUAD TCGA-91-8499 4 In-Frame Intra-chr q24 q24 Seq+ 7730 ChimerSeq FusionScan TCGA_RNA-Seq BTF3L4-INADL BTF3L4 chr1 52525573 + INADL chr1 62483527 + Exonic hg19 LUAD TCGA-91-8499 3 In-Frame Intra-chr p32.3 7731 ChimerSeq FusionScan TCGA_RNA-Seq FAM162A-CASR FAM162A chr3 122103146 + CASR chr3 121980374 + Exonic hg19 LUAD TCGA-91-8499 3 Out-of-Frame Intra-chr q21.1 q13.33 Seq+ 7732 ChimerSeq FusionScan TCGA_RNA-Seq DGKD-SAG DGKD chr2 234299129 + SAG chr2 234217807 + Exonic hg19 LUAD TCGA-91-8499 2 CDS-5'UTR Intra-chr Seq+ 7733 ChimerSeq FusionScan TCGA_RNA-Seq IPO7-AKIP1 IPO7 chr11 9442245 + AKIP1 chr11 8933999 + Exonic hg19 LUAD TCGA-55-6969 2 In-Frame Intra-chr p15.4 p15.4 Seq+ 7734 ChimerSeq FusionScan TCGA_RNA-Seq SEMA3F-RBM6 SEMA3F chr3 50211783 + RBM6 chr3 50085677 + Exonic hg19 LUAD TCGA-55-6969 2 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene Seq+ 7735 ChimerSeq FusionScan TCGA_RNA-Seq G2E3-NAP1L1 G2E3 chr14 31050322 + NAP1L1 chr12 76443565 - Exonic hg19 LUAD TCGA-69-7760 3 Out-of-Frame Inter-chr q12 q21.2 Seq+ 7736 ChimerSeq FusionScan TCGA_RNA-Seq FRYL-OCIAD2 FRYL chr4 48712535 - OCIAD2 chr4 48896070 - Exonic hg19 LUAD TCGA-64-5774 3 5'UTR-CDS Intra-chr p11 p11 Seq+ 7737 ChimerSeq FusionScan TCGA_RNA-Seq P2RY6-ARHGEF17 P2RY6 chr11 72975694 + ARHGEF17 chr11 73057927 + Exonic hg19 LUAD TCGA-73-4666 2 5'UTR-CDS Intra-chr q13.4 q13.4 7738 ChimerSeq FusionScan TCGA_RNA-Seq ROCK1-CABYR ROCK1 chr18 18690778 - CABYR chr18 21735664 + Exonic hg19 LUAD TCGA-97-7552 2 Out-of-Frame Intra-chr q11.1 AGC:DMPK q11.2 Seq+ 7739 ChimerSeq FusionScan TCGA_RNA-Seq SDC4-YWHAB SDC4 chr20 43976964 - YWHAB chr20 43532633 + Exonic hg19 LUAD TCGA-97-8177 3 In-Frame Intra-chr q13.12 q13.12 Seq+ 7740 ChimerSeq FusionScan TCGA_RNA-Seq ROS1-CD74 ROS1 chr6 117700221 - CD74 chr5 149782188 - Exonic hg19 LUAD TCGA-86-8278 6 Out-of-Frame Inter-chr q22.1 Oncogene q33.1 Seq+ 7741 ChimerSeq FusionScan TCGA_RNA-Seq CD74-ROS1 CD74 chr5 149784242 - ROS1 chr6 117645578 - Exonic hg19 LUAD TCGA-86-8278 5 In-Frame Inter-chr q33.1 q22.1 Oncogene KB Pub Seq+ 7742 ChimerSeq FusionScan TCGA_RNA-Seq ACTN4-YIF1B ACTN4 chr19 39138547 + YIF1B chr19 38800283 - Exonic hg19 LUAD TCGA-55-A4DF 3 Out-of-Frame Intra-chr q13.2 Seq+ 7743 ChimerSeq FusionScan TCGA_RNA-Seq ZNF295-C2CD2 ZNF295 chr21 43430360 - C2CD2 chr21 43342194 - Exonic hg19 LUAD TCGA-55-A4DF 2 5'UTR-5'UTR Intra-chr q22.3 7744 ChimerSeq FusionScan TCGA_RNA-Seq PRKAA1-TBC1D5 PRKAA1 chr5 40798164 - TBC1D5 chr3 17255862 - Exonic hg19 LUAD TCGA-55-7994 4 In-Frame Inter-chr p13.1 Tumor suppressor gene p24.3 Seq+ 7745 ChimerSeq FusionScan TCGA_RNA-Seq CSPP1-MAN1A2 CSPP1 chr8 68071372 + MAN1A2 chr1 117944807 + Exonic hg19 LUAD TCGA-78-7167 2 Out-of-Frame Inter-chr q13.1 p12 Seq+ 7746 ChimerSeq FusionScan TCGA_RNA-Seq SREBF2-PPAPDC1A SREBF2 chr22 42229362 + PPAPDC1A chr10 122334642 + Exonic hg19 LUAD TCGA-97-8175 3 In-Frame Inter-chr q13.2 Transcription factor Seq+ 7747 ChimerSeq FusionScan TCGA_RNA-Seq CACNB1-LRRC37B CACNB1 chr17 37353664 - LRRC37B chr17 30358396 + Exonic hg19 LUAD TCGA-97-8175 2 Out-of-Frame Intra-chr q12 q11.2 7748 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHA2-HTRA4 PLEKHA2 chr8 38775588 + HTRA4 chr8 38835471 + Exonic hg19 LUAD TCGA-50-5933 2 In-Frame Intra-chr p11.22 p11.22 7749 ChimerSeq FusionScan TCGA_RNA-Seq HOOK3-TM2D2 HOOK3 chr8 42761401 + TM2D2 chr8 38853212 - Exonic hg19 LUAD TCGA-50-5933 2 CDS-5'UTR Intra-chr p11.21 Oncogene p11.22 Seq+ 7750 ChimerSeq FusionScan TCGA_RNA-Seq KRBOX1-FAM198A KRBOX1 chr3 42983563 + FAM198A chr3 43073758 + Exonic hg19 LUAD TCGA-05-4382 2 Out-of-Frame Intra-chr p22.1 p22.1 Seq+ 7751 ChimerSeq FusionScan TCGA_RNA-Seq EZR-ROS1 EZR chr6 159191795 - ROS1 chr6 117645578 - Exonic hg19 LUAD TCGA-55-6986 8 In-Frame Intra-chr q25.3 q22.1 Oncogene KB Pub Seq+ 7752 ChimerSeq FusionScan TCGA_RNA-Seq IL9R-FLJ43681 IL9R chrY 59338150 + FLJ43681 chr17 81187692 + Exonic hg19 LUAD TCGA-55-6980 2 5'UTR-5'UTR Inter-chr q28 7753 ChimerSeq FusionScan TCGA_RNA-Seq AGPS-NCKAP5 AGPS chr2 178333252 + NCKAP5 chr2 133721442 - Exonic hg19 LUAD TCGA-J2-A4AG 2 Out-of-Frame Intra-chr q31.2 q21.2 7754 ChimerSeq FusionScan TCGA_RNA-Seq EGFR-VOPP1 EGFR chr7 55087058 + VOPP1 chr7 55588823 - Exonic hg19 LUAD TCGA-55-8089 5 Out-of-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 7755 ChimerSeq FusionScan TCGA_RNA-Seq LINC00265-NXPH1 LINC00265 chr7 39773643 + NXPH1 chr7 8790637 + Exonic hg19 LUAD TCGA-55-8089 5 5'UTR-CDS Intra-chr p14.1 p21.3 Seq+ 7756 ChimerSeq FusionScan TCGA_RNA-Seq KLHL7-DNAH11 KLHL7 chr7 23145765 + DNAH11 chr7 21584623 + Exonic hg19 LUAD TCGA-55-8089 5 In-Frame Intra-chr p15.3 p15.3 Seq+ 7757 ChimerSeq FusionScan TCGA_RNA-Seq HAS2-HHLA1 HAS2 chr8 122653092 - HHLA1 chr8 133112381 - Exonic hg19 LUAD TCGA-55-8089 3 5'UTR-CDS Intra-chr q24.13 q24.22 Seq+ 7758 ChimerSeq FusionScan TCGA_RNA-Seq VOPP1-RAPGEF5 VOPP1 chr7 55639963 - RAPGEF5 chr7 22357656 - Exonic hg19 LUAD TCGA-55-8089 2 CDS-5'UTR Intra-chr p11.2 p15.3 Seq+ 7759 ChimerSeq FusionScan TCGA_RNA-Seq HEATR7A-GPAA1 HEATR7A chr8 145202979 + GPAA1 chr8 145138291 + Exonic hg19 LUAD TCGA-62-A46O 3 5'UTR-CDS Intra-chr q24.3 Seq+ 7760 ChimerSeq FusionScan TCGA_RNA-Seq ETV6-PLEKHG6 ETV6 chr12 11803094 + PLEKHG6 chr12 6424170 + Exonic hg19 LUAD TCGA-62-A46O 2 In-Frame Intra-chr p13.2 Tumor suppressor gene Transcription factor p13.31 Seq+ 7761 ChimerSeq FusionScan TCGA_RNA-Seq ASXL2-SRBD1 ASXL2 chr2 26101034 - SRBD1 chr2 45715470 - Exonic hg19 LUAD TCGA-44-7670 3 Out-of-Frame Intra-chr p23.3 p21 Seq+ 7762 ChimerSeq FusionScan TCGA_RNA-Seq FRMD6-SCFD1 FRMD6 chr14 52118714 + SCFD1 chr14 31163978 + Exonic hg19 LUAD TCGA-44-7670 3 5'UTR-5'UTR Intra-chr q22.1 q12 Seq+ 7763 ChimerSeq FusionScan TCGA_RNA-Seq MTMR12-ZFR MTMR12 chr5 32312863 - ZFR chr5 32364381 - Exonic hg19 LUAD TCGA-44-7670 2 In-Frame Intra-chr p13.3 p13.3 Seq+ 7764 ChimerSeq FusionScan TCGA_RNA-Seq SCMH1-CUL3 SCMH1 chr1 41707730 - CUL3 chr2 225346795 - Exonic hg19 LUAD TCGA-44-7670 2 5'UTR-CDS Inter-chr p34.2 Transcription factor q36.2 Seq+ 7765 ChimerSeq FusionScan TCGA_RNA-Seq CPNE8-CADM2 CPNE8 chr12 39299238 - CADM2 chr3 85851196 + Exonic hg19 LUAD TCGA-44-7670 2 Out-of-Frame Inter-chr q12 p12.1 Tumor suppressor gene Seq+ 7766 ChimerSeq FusionScan TCGA_RNA-Seq PRCC-NTRK1 PRCC chr1 156738031 + NTRK1 chr1 156811872 + Exonic hg19 LUAD TCGA-55-8615 2 In-Frame Intra-chr q23.1 q23.1 Oncogene 7767 ChimerSeq FusionScan TCGA_RNA-Seq DCHS2-FGG DCHS2 chr4 155410455 - FGG chr4 155533353 - Exonic hg19 LUAD TCGA-49-6743 6 In-Frame Intra-chr q32.1 Seq+ 7768 ChimerSeq FusionScan TCGA_RNA-Seq CCDC97-GTF2A2 CCDC97 chr19 41816261 + GTF2A2 chr15 59944525 - Exonic hg19 LUAD TCGA-49-6743 4 CDS-5'UTR Inter-chr q13.2 q22.2 Seq+ 7769 ChimerSeq FusionScan TCGA_RNA-Seq REL-MVP REL chr2 61144152 + MVP chr16 29847024 + Exonic hg19 LUAD TCGA-49-6743 3 In-Frame Inter-chr p16.1 Oncogene Transcription factor p11.2 Seq+ 7770 ChimerSeq FusionScan TCGA_RNA-Seq GALNT8-KCNA6 GALNT8 chr12 4874712 + KCNA6 chr12 4959903 + Exonic hg19 LUAD TCGA-49-6743 2 CDS-3'UTR Intra-chr p13.32 7771 ChimerSeq FusionScan TCGA_RNA-Seq CSNK1D-CCDC57 CSNK1D chr17 80209254 - CCDC57 chr17 80059742 - Exonic hg19 LUAD TCGA-95-7944 2 Out-of-Frame Intra-chr q25.3 q25.3 Seq+ 7772 ChimerSeq FusionScan TCGA_RNA-Seq SDC4-NRG1 SDC4 chr20 43959005 - NRG1 chr8 32585466 + Exonic hg19 LUAD TCGA-86-7954 8 In-Frame Inter-chr q13.12 p12 KB Pub Seq+ 7773 ChimerSeq FusionScan TCGA_RNA-Seq USP9X-KDM6A USP9X chrX 41031211 + KDM6A chrX 44870205 + Exonic hg19 LUAD TCGA-86-7954 4 Out-of-Frame Intra-chr p11.4 Oncogene p11.3 Oncogene Tumor suppressor gene Seq+ 7774 ChimerSeq FusionScan TCGA_RNA-Seq TRA2A-EPDR1 TRA2A chr7 23571407 - EPDR1 chr7 37988441 + Exonic hg19 LUAD TCGA-86-7954 4 Out-of-Frame Intra-chr p15.3 p14.1 Seq+ 7775 ChimerSeq FusionScan TCGA_RNA-Seq KDM6A-METTL20 KDM6A chrX 44733233 + METTL20 chr12 31814774 + Exonic hg19 LUAD TCGA-86-7954 4 CDS-5'UTR Inter-chr p11.3 Oncogene Tumor suppressor gene Seq+ 7776 ChimerSeq FusionScan TCGA_RNA-Seq TRA2A-EPDR1 TRA2A chr7 23571407 - EPDR1 chr7 37989801 + Exonic hg19 LUAD TCGA-86-7954 2 Out-of-Frame Intra-chr p15.3 p14.1 Seq+ 7777 ChimerSeq FusionScan TCGA_RNA-Seq PPP2CA-CDH3 PPP2CA chr5 133561450 - CDH3 chr16 68710287 + Exonic hg19 LUAD TCGA-05-4427 3 Out-of-Frame Inter-chr q31.1 Tumor suppressor gene q22.1 Seq+ 7778 ChimerSeq FusionScan TCGA_RNA-Seq CDH1-CDKL3 CDH1 chr16 68856128 + CDKL3 chr5 133644157 - Exonic hg19 LUAD TCGA-05-4427 2 Out-of-Frame Inter-chr q22.1 Oncogene Tumor suppressor gene q31.1 CMGC:CDKL Seq+ 7779 ChimerSeq FusionScan TCGA_RNA-Seq IL6ST-ANKRD55 IL6ST chr5 55272042 - ANKRD55 chr5 55412609 - Exonic hg19 LUAD TCGA-05-4427 2 Out-of-Frame Intra-chr q11.2 Oncogene q11.2 Seq+ 7780 ChimerSeq FusionScan TCGA_RNA-Seq PLS3-CCDC64 PLS3 chrX 114874815 + CCDC64 chr12 120499513 + Exonic hg19 LUAD TCGA-05-4427 2 In-Frame Inter-chr q23 Seq+ 7781 ChimerSeq FusionScan TCGA_RNA-Seq MTUS1-FGL1 MTUS1 chr8 17570722 - FGL1 chr8 17726513 - Exonic hg19 LUAD TCGA-55-8094 4 In-Frame Intra-chr p22 Tumor suppressor gene p22 Seq+ 7782 ChimerSeq FusionScan TCGA_RNA-Seq DYNLT3-U2AF2 DYNLT3 chrX 37700280 - U2AF2 chr19 56179872 + Exonic hg19 LUAD TCGA-55-8094 4 In-Frame Inter-chr p11.4 q13.42 Seq+ 7783 ChimerSeq FusionScan TCGA_RNA-Seq GRB10-DDC GRB10 chr7 50737418 - DDC chr7 50537869 - Exonic hg19 LUAD TCGA-55-8094 3 In-Frame Intra-chr p12.1 p12.1 Seq+ 7784 ChimerSeq FusionScan TCGA_RNA-Seq YWHAE-SLC43A2 YWHAE chr17 1257504 - SLC43A2 chr17 1489345 - Exonic hg19 LUAD TCGA-55-8094 2 In-Frame Intra-chr p13.3 Seq+ 7785 ChimerSeq FusionScan TCGA_RNA-Seq HAT1-EXOC6B HAT1 chr2 172844276 + EXOC6B chr2 72411316 - Exonic hg19 LUAD TCGA-05-4420 2 In-Frame Intra-chr q31.1 p13.2 Seq+ 7786 ChimerSeq FusionScan TCGA_RNA-Seq B4GALT5-TOX2 B4GALT5 chr20 48330112 - TOX2 chr20 42602006 + Exonic hg19 LUAD TCGA-75-6214 3 Out-of-Frame Intra-chr q13.13 q13.12 Seq+ 7787 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57763169 + VMP1 chr17 57886156 + Exonic hg19 LUAD TCGA-75-6214 3 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 7788 ChimerSeq FusionScan TCGA_RNA-Seq LAMA3-ZNF521 LAMA3 chr18 21529888 + ZNF521 chr18 22807661 - Exonic hg19 LUAD TCGA-75-6214 3 In-Frame Intra-chr q11.2 q11.2 Oncogene Transcription factor Seq+ 7789 ChimerSeq FusionScan TCGA_RNA-Seq THBS3-HDGF THBS3 chr1 155175990 - HDGF chr1 156715165 - Exonic hg19 LUAD TCGA-78-7539 2 Out-of-Frame Intra-chr q22 q23.1 Seq+ 7790 ChimerSeq FusionScan TCGA_RNA-Seq BMPR2-KANSL1L BMPR2 chr2 203242273 + KANSL1L chr2 210962931 - Exonic hg19 LUAD TCGA-78-7539 2 3'UTR-CDS Intra-chr q33.1 TKL:STKR Tumor suppressor gene q34 Seq+ 7791 ChimerSeq FusionScan TCGA_RNA-Seq WARS-C8orf12 WARS chr14 100835423 - C8orf12 chr8 11291428 + Exonic hg19 LUAD TCGA-91-7771 2 CDS-5'UTR Inter-chr q32.2 Seq+ 7792 ChimerSeq FusionScan TCGA_RNA-Seq TICAM1-IL12RB1 TICAM1 chr19 4831625 - IL12RB1 chr19 18180523 - Exonic hg19 LUAD TCGA-05-4426 5 5'UTR-CDS Intra-chr p13.3 p13.11 Seq+ 7793 ChimerSeq FusionScan TCGA_RNA-Seq THRAP3-EIF2C3 THRAP3 chr1 36725085 + EIF2C3 chr1 36499774 + Exonic hg19 LUAD TCGA-05-4426 2 5'UTR-CDS Intra-chr p34.3 Seq+ 7794 ChimerSeq FusionScan TCGA_RNA-Seq ADNP-DDX27 ADNP chr20 49547362 - DDX27 chr20 47837988 + Exonic hg19 LUAD TCGA-78-7152 5 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.13 Seq+ 7795 ChimerSeq FusionScan TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 125051853 - SCARB1 chr12 125302253 - Exonic hg19 LUAD TCGA-78-7152 4 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 7796 ChimerSeq FusionScan TCGA_RNA-Seq IL34-ST3GAL2 IL34 chr16 70613952 + ST3GAL2 chr16 70433436 - Exonic hg19 LUAD TCGA-05-4402 3 5'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 7797 ChimerSeq FusionScan TCGA_RNA-Seq CD2AP-NFKBIE CD2AP chr6 47445984 + NFKBIE chr6 44228276 - Exonic hg19 LUAD TCGA-05-4402 3 In-Frame Intra-chr p12.3 p21.1 Seq+ 7798 ChimerSeq FusionScan TCGA_RNA-Seq LPCAT1-TERT LPCAT1 chr5 1523824 - TERT chr5 1282739 - Exonic hg19 LUAD TCGA-05-4402 2 Out-of-Frame Intra-chr p15.33 Oncogene Seq+ 7799 ChimerSeq FusionScan TCGA_RNA-Seq ZNF679-VOPP1 ZNF679 chr7 63709534 + VOPP1 chr7 55588823 - Exonic hg19 LUAD TCGA-05-4402 2 In-Frame Intra-chr q11.21 Transcription factor p11.2 Seq+ 7800 ChimerSeq FusionScan TCGA_RNA-Seq RAP1B-ITPR2 RAP1B chr12 69004832 + ITPR2 chr12 26493261 - Exonic hg19 LUAD TCGA-44-3918 2 5'UTR-CDS Intra-chr q15 p11.23 7801 ChimerSeq FusionScan TCGA_RNA-Seq GALNT8-KCNA6 GALNT8 chr12 4874712 + KCNA6 chr12 4959903 + Exonic hg19 LUAD TCGA-75-5147 2 CDS-3'UTR Intra-chr p13.32 7802 ChimerSeq FusionScan TCGA_RNA-Seq LAMA3-FAM59A LAMA3 chr18 21462009 + FAM59A chr18 29850346 - Exonic hg19 LUAD TCGA-05-5425 5 Out-of-Frame Intra-chr q11.2 Seq+ 7803 ChimerSeq FusionScan TCGA_RNA-Seq IGFBPL1-SHB IGFBPL1 chr9 38423961 - SHB chr9 37920001 - Exonic hg19 LUAD TCGA-05-5425 2 Out-of-Frame Intra-chr p13.1 Tumor suppressor gene p13.1 7804 ChimerSeq FusionScan TCGA_RNA-Seq SPATA2-GSTA5 SPATA2 chr20 48531916 - GSTA5 chr6 52697788 - Exonic hg19 LUAD TCGA-49-4487 2 5'UTR-CDS Inter-chr q13.13 p12.2 Seq+ 7805 ChimerSeq FusionScan TCGA_RNA-Seq STIM1-NUP98 STIM1 chr11 3877639 + NUP98 chr11 3756554 - Exonic hg19 LUAD TCGA-93-A4JP 2 In-Frame Intra-chr p15.4 p15.4 Oncogene Tumor suppressor gene Seq+ 7806 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KC1-CD34 RPS6KC1 chr1 213290752 + CD34 chr1 208073348 - Exonic hg19 LUAD TCGA-50-5932 2 In-Frame Intra-chr q32.3 q32.2 Seq+ 7807 ChimerSeq FusionScan TCGA_RNA-Seq SDHB-MST1P9 SDHB chr1 17380442 - MST1P9 chr1 17087597 - Exonic hg19 LUAD TCGA-MP-A4SW 2 CDS-3'UTR Intra-chr p36.13 Oncogene Tumor suppressor gene 7808 ChimerSeq FusionScan TCGA_RNA-Seq MYH9-ORAOV1 MYH9 chr22 36744948 - ORAOV1 chr11 69488089 - Exonic hg19 LUAD TCGA-64-1678 2 Out-of-Frame Inter-chr q12.3 Oncogene Tumor suppressor gene q13.3 Seq+ 7809 ChimerSeq FusionScan TCGA_RNA-Seq LINS-CERS3 LINS chr15 101142325 - CERS3 chr15 101042055 - Exonic hg19 LUAD TCGA-62-8399 2 5'UTR-5'UTR Intra-chr q26.3 Seq+ 7810 ChimerSeq FusionScan TCGA_RNA-Seq KDM3B-AKAP3 KDM3B chr5 137688676 + AKAP3 chr12 4725060 - Exonic hg19 LUAD TCGA-86-8073 2 In-Frame Inter-chr q31.2 Tumor suppressor gene p13.32 7811 ChimerSeq FusionScan TCGA_RNA-Seq PLA2G10-CLEC16A PLA2G10 chr16 14787989 - CLEC16A chr16 11096930 + Exonic hg19 LUAD TCGA-97-7547 2 Out-of-Frame Intra-chr p13.13 Seq+ 7812 ChimerSeq FusionScan TCGA_RNA-Seq PPP2CA-SKP1 PPP2CA chr5 133561450 - SKP1 chr5 133509713 - Exonic hg19 LUAD TCGA-91-6847 2 CDS-5'UTR Intra-chr q31.1 Tumor suppressor gene q31.1 7813 ChimerSeq FusionScan TCGA_RNA-Seq BCAS3-GIT1 BCAS3 chr17 58946044 + GIT1 chr17 27905797 - Exonic hg19 LUAD TCGA-91-6847 2 In-Frame Intra-chr q23.2 q11.2 Seq+ 7814 ChimerSeq FusionScan TCGA_RNA-Seq PACSIN2-TTLL1 PACSIN2 chr22 43308026 - TTLL1 chr22 43435911 - Exonic hg19 LUAD TCGA-50-6597 4 Out-of-Frame Intra-chr q13.2 q13.2 Seq+ 7815 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC17-SERINC2 ZCCHC17 chr1 31821821 + SERINC2 chr1 31883231 + Exonic hg19 LUAD TCGA-99-8032 2 In-Frame Intra-chr p35.2 p35.2 7816 ChimerSeq FusionScan TCGA_RNA-Seq POFUT1-ITCH POFUT1 chr20 30804524 + ITCH chr20 33030012 + Exonic hg19 LUAD TCGA-50-6590 3 In-Frame Intra-chr q11.21 q11.22 Seq+ 7817 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D14-BRSK2 TBC1D14 chr4 6925838 + BRSK2 chr11 1457269 + Exonic hg19 LUAD TCGA-50-6590 2 Out-of-Frame Inter-chr p16.1 p15.5 CAMK:CAMKL Seq+ 7818 ChimerSeq FusionScan TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23739997 - APOO chrX 23899069 - Exonic hg19 LUAD TCGA-05-5423 2 In-Frame Intra-chr p22.11 p22.11 Seq+ 7819 ChimerSeq FusionScan TCGA_RNA-Seq WASF2-IFI6 WASF2 chr1 27816496 - IFI6 chr1 27995857 - Exonic hg19 LUAD TCGA-49-4505 3 5'UTR-5'UTR Intra-chr p36.11 p35.3 Seq+ 7820 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57990165 + VMP1 chr17 57915655 + Exonic hg19 LUAD TCGA-49-4505 3 Out-of-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 7821 ChimerSeq FusionScan TCGA_RNA-Seq TMEM230-LMTK2 TMEM230 chr20 5086833 - LMTK2 chr7 97820039 + Exonic hg19 LUAD TCGA-62-A46U 2 Out-of-Frame Inter-chr p12.3 q21.3 7822 ChimerSeq FusionScan TCGA_RNA-Seq MSI2-NPEPPS MSI2 chr17 55335715 + NPEPPS chr17 45668082 + Exonic hg19 LUAD TCGA-62-A46U 2 In-Frame Intra-chr q22 q21.32 Seq+ 7823 ChimerSeq FusionScan TCGA_RNA-Seq SMCHD1-NDC80 SMCHD1 chr18 2688745 + NDC80 chr18 2585111 + Exonic hg19 LUAD TCGA-62-A46U 2 In-Frame Intra-chr p11.32 Tumor suppressor gene p11.32 Seq+ 7824 ChimerSeq FusionScan TCGA_RNA-Seq NCLN-ACSBG2 NCLN chr19 3193426 + ACSBG2 chr19 6187293 + Exonic hg19 LUAD TCGA-75-5125 2 In-Frame Intra-chr p13.3 p13.3 Seq+ 7825 ChimerSeq FusionScan TCGA_RNA-Seq LINC00271-NAALADL2 LINC00271 chr6 135819138 + NAALADL2 chr3 174814579 + Exonic hg19 LUAD TCGA-55-7727 2 5'UTR-CDS Inter-chr q23.3 q26.31 7826 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1432-AARD KIAA1432 chr9 5690038 + AARD chr8 117954796 + Exonic hg19 LUAD TCGA-75-6207 4 Out-of-Frame Inter-chr q24.11 Seq+ 7827 ChimerSeq FusionScan TCGA_RNA-Seq TRIO-UHRF2 TRIO chr5 14143991 + UHRF2 chr9 6420911 + Exonic hg19 LUAD TCGA-75-6207 2 Out-of-Frame Inter-chr p15.2 p24.1 Tumor suppressor gene Seq+ 7828 ChimerSeq FusionScan TCGA_RNA-Seq ARL17A-KANSL1 ARL17A chr17 44648124 - KANSL1 chr17 44172067 - Exonic hg19 LUAD TCGA-44-6147 2 5'UTR-CDS Intra-chr q21.31 Seq+ 7829 ChimerSeq FusionScan TCGA_RNA-Seq ARL17B-KANSL1 ARL17B chr17 44430185 - KANSL1 chr17 44172067 - Exonic hg19 LUAD TCGA-44-6147 2 3'UTR-3'UTR Intra-chr 7830 ChimerSeq FusionScan TCGA_RNA-Seq RPLP2-TALDO1 RPLP2 chr11 811645 + TALDO1 chr11 755878 + Exonic hg19 LUAD TCGA-67-3771 3 5'UTR-CDS Intra-chr p15.5 p15.5 Seq+ 7831 ChimerSeq FusionScan TCGA_RNA-Seq BIN3-PEBP4 BIN3 chr8 22502267 - PEBP4 chr8 22571049 - Exonic hg19 LUAD TCGA-MN-A4N1 2 Out-of-Frame Intra-chr p21.3 p21.3 Seq+ 7832 ChimerSeq FusionScan TCGA_RNA-Seq POLD3-ODZ4 POLD3 chr11 74331134 + ODZ4 chr11 78781054 - Exonic hg19 LUAD TCGA-MN-A4N1 2 5'UTR-5'UTR Intra-chr q13.4 Seq+ 7833 ChimerSeq FusionScan TCGA_RNA-Seq SIK3-CD3D SIK3 chr11 116968858 - CD3D chr11 118210209 - Exonic hg19 LUAD TCGA-73-4658 2 Out-of-Frame Intra-chr q23.3 q23.3 Seq+ 7834 ChimerSeq FusionScan TCGA_RNA-Seq KDM2A-PACS1 KDM2A chr11 66888829 + PACS1 chr11 65960956 + Exonic hg19 LUAD TCGA-99-8025 2 Out-of-Frame Intra-chr q13.2 Transcription factor q13.1 Seq+ 7835 ChimerSeq FusionScan TCGA_RNA-Seq STK3-CPQ STK3 chr8 99608259 - CPQ chr8 97797091 + Exonic hg19 LUAD TCGA-44-6775 2 CDS-5'UTR Intra-chr q22.2 q22.1 Seq+ 7836 ChimerSeq FusionScan TCGA_RNA-Seq ZFAND3-LYRM4 ZFAND3 chr6 37897775 + LYRM4 chr6 5109725 - Exonic hg19 LUAD TCGA-44-2656 5 Out-of-Frame Intra-chr p21.2 p25.1 Seq+ 7837 ChimerSeq FusionScan TCGA_RNA-Seq FBXO34-LGALS3 FBXO34 chr14 55738255 + LGALS3 chr14 55606992 + Exonic hg19 LUAD TCGA-44-4112 5 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 7838 ChimerSeq FusionScan TCGA_RNA-Seq C5orf28-PAIP1 C5orf28 chr5 43483923 - PAIP1 chr5 43556101 - Exonic hg19 LUAD TCGA-44-4112 2 5'UTR-5'UTR Intra-chr p12 Seq+ 7839 ChimerSeq FusionScan TCGA_RNA-Seq SNED1-PPP1R7 SNED1 chr2 241938467 + PPP1R7 chr2 242102699 + Exonic hg19 LUAD TCGA-MN-A4N5 3 In-Frame Intra-chr q37.3 q37.3 Seq+ 7840 ChimerSeq FusionScan TCGA_RNA-Seq CD74-ROS1 CD74 chr5 149784242 - ROS1 chr6 117645578 - Exonic hg19 LUAD TCGA-64-1680 4 In-Frame Inter-chr q33.1 q22.1 Oncogene KB Pub Seq+ 7841 ChimerSeq FusionScan TCGA_RNA-Seq SHC1-ASH1L SHC1 chr1 154946723 - ASH1L chr1 155309159 - Exonic hg19 LUAD TCGA-55-7903 2 5'UTR-CDS Intra-chr q21.3 q22 Transcription factor Seq+ 7842 ChimerSeq FusionScan TCGA_RNA-Seq RHOBTB1-ANK3 RHOBTB1 chr10 62701561 - ANK3 chr10 62374982 - Exonic hg19 LUAD TCGA-55-7903 2 5'UTR-CDS Intra-chr q21.2 q21.2 7843 ChimerSeq FusionScan TCGA_RNA-Seq YWHAE-SPNS3 YWHAE chr17 1264385 - SPNS3 chr17 4381866 + Exonic hg19 LUAD TCGA-80-5611 2 Out-of-Frame Intra-chr p13.3 p13.2 Seq+ 7844 ChimerSeq FusionScan TCGA_RNA-Seq NCK1-IL20RB NCK1 chr3 136647069 + IL20RB chr3 136699307 + Exonic hg19 LUAD TCGA-80-5611 2 In-Frame Intra-chr q22.3 q22.3 Seq+ 7845 ChimerSeq FusionScan TCGA_RNA-Seq LARP4-MUCL1 LARP4 chr12 50794811 + MUCL1 chr12 55248899 + Exonic hg19 LUAD TCGA-91-6840 5 Out-of-Frame Intra-chr q13.12 q13.2 Seq+ 7846 ChimerSeq FusionScan TCGA_RNA-Seq TAF8-CRISP1 TAF8 chr6 42036345 + CRISP1 chr6 49819842 - Exonic hg19 LUAD TCGA-91-6840 4 In-Frame Intra-chr p21.1 p12.3 Seq+ 7847 ChimerSeq FusionScan TCGA_RNA-Seq LARP4-MUCL1 LARP4 chr12 50794811 + MUCL1 chr12 55250553 + Exonic hg19 LUAD TCGA-91-6840 2 Out-of-Frame Intra-chr q13.12 q13.2 Seq+ 7848 ChimerSeq FusionScan TCGA_RNA-Seq PPTC7-ARPC3 PPTC7 chr12 111020613 - ARPC3 chr12 110878193 - Exonic hg19 LUAD TCGA-91-6840 2 In-Frame Intra-chr q24.11 q24.11 Seq+ 7849 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57915655 + Exonic hg19 LUAD TCGA-86-8056 2 Out-of-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 7850 ChimerSeq FusionScan TCGA_RNA-Seq MBTD1-PHB MBTD1 chr17 49336503 - PHB chr17 47490653 - Exonic hg19 LUAD TCGA-50-6595 2 5'UTR-5'UTR Intra-chr q21.33 q21.33 Tumor suppressor gene Seq+ 7851 ChimerSeq FusionScan TCGA_RNA-Seq TPD52L2-PDZRN4 TPD52L2 chr20 62500794 + PDZRN4 chr12 41900257 + Exonic hg19 LUAD TCGA-55-8087 7 In-Frame Inter-chr q13.33 q12 Seq+ 7852 ChimerSeq FusionScan TCGA_RNA-Seq GPBP1-GOLGA8A GPBP1 chr5 56543042 + GOLGA8A chr15 34692960 - Exonic hg19 LUAD TCGA-86-8669 3 CDS-3'UTR Inter-chr q11.2 Transcription factor q14 Seq+ 7853 ChimerSeq FusionScan TCGA_RNA-Seq TMEM107-WRAP53 TMEM107 chr17 8079517 - WRAP53 chr17 7604058 + Exonic hg19 LUAD TCGA-50-6673 4 In-Frame Intra-chr p13.1 p13.1 Seq+ 7854 ChimerSeq FusionScan TCGA_RNA-Seq UNK-B4GALNT2 UNK chr17 73781065 + B4GALNT2 chr17 47218608 + Exonic hg19 LUAD TCGA-50-6673 3 In-Frame Intra-chr q25.1 q21.32 Seq+ 7855 ChimerSeq FusionScan TCGA_RNA-Seq SLC39A11-DHX29 SLC39A11 chr17 71027694 - DHX29 chr5 54552368 - Exonic hg19 LUAD TCGA-50-6673 2 Out-of-Frame Inter-chr q25.1 q11.2 Seq+ 7856 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0146-HNRPDL KIAA0146 chr8 48586503 + HNRPDL chr4 83346036 - Exonic hg19 LUAD TCGA-50-6673 2 CDS-3'UTR Inter-chr 7857 ChimerSeq FusionScan TCGA_RNA-Seq RNF170-SFRP1 RNF170 chr8 42742870 - SFRP1 chr8 41123008 - Exonic hg19 LUAD TCGA-50-6673 2 Out-of-Frame Intra-chr p11.21 p11.21 Tumor suppressor gene Seq+ 7858 ChimerSeq FusionScan TCGA_RNA-Seq FNDC3B-KHDRBS3 FNDC3B chr3 171758414 + KHDRBS3 chr8 136619197 + Exonic hg19 LUAD TCGA-78-7147 6 5'UTR-CDS Inter-chr q26.31 q24.23 Seq+ 7859 ChimerSeq FusionScan TCGA_RNA-Seq FNDC3B-KHDRBS3 FNDC3B chr3 171757561 + KHDRBS3 chr8 136657301 + Exonic hg19 LUAD TCGA-78-7147 5 5'UTR-CDS Inter-chr q26.31 q24.23 Seq+ 7860 ChimerSeq FusionScan TCGA_RNA-Seq FNDC3B-KHDRBS3 FNDC3B chr3 171757561 + KHDRBS3 chr8 136619197 + Exonic hg19 LUAD TCGA-78-7147 5 5'UTR-CDS Inter-chr q26.31 q24.23 Seq+ 7861 ChimerSeq FusionScan TCGA_RNA-Seq FNDC3B-KHDRBS3 FNDC3B chr3 171758414 + KHDRBS3 chr8 136657301 + Exonic hg19 LUAD TCGA-78-7147 2 5'UTR-CDS Inter-chr q26.31 q24.23 Seq+ 7862 ChimerSeq FusionScan TCGA_RNA-Seq KPNA1-GMPS KPNA1 chr3 122215283 - GMPS chr3 155637021 + Exonic hg19 LUAD TCGA-78-7147 2 In-Frame Intra-chr q21.1 q25.31 Seq+ 7863 ChimerSeq FusionScan TCGA_RNA-Seq PDE4D-CRABP1 PDE4D chr5 58334685 - CRABP1 chr15 78640268 + Exonic hg19 LUAD TCGA-86-7713 6 In-Frame Inter-chr q12.1 q25.1 Seq+ 7864 ChimerSeq FusionScan TCGA_RNA-Seq DDX58-TCERG1L DDX58 chr9 32526058 - TCERG1L chr10 132902617 - Exonic hg19 LUAD TCGA-86-7713 4 Out-of-Frame Inter-chr p21.1 Tumor suppressor gene q26.3 Seq+ 7865 ChimerSeq FusionScan TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 125020110 - SCARB1 chr12 125284788 - Exonic hg19 LUAD TCGA-55-8301 2 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 7866 ChimerSeq FusionScan TCGA_RNA-Seq TANC2-CRB3 TANC2 chr17 61345234 + CRB3 chr19 6465555 + Exonic hg19 LUAD TCGA-50-5946 4 In-Frame Inter-chr q23.2 p13.3 Seq+ 7867 ChimerSeq FusionScan TCGA_RNA-Seq ACO2-FLJ43681 ACO2 chr22 41904053 + FLJ43681 chr17 81187692 + Exonic hg19 LUAD TCGA-50-5066 3 5'UTR-5'UTR Inter-chr q13.2 Seq+ 7868 ChimerSeq FusionScan TCGA_RNA-Seq TOP1-LPHN3 TOP1 chr20 39725981 + LPHN3 chr4 62758373 + Exonic hg19 LUAD TCGA-73-4662 2 Out-of-Frame Inter-chr q12 Oncogene Seq+ 7869 ChimerSeq FusionScan TCGA_RNA-Seq PEAK1-TSPAN3 PEAK1 chr15 77425346 - TSPAN3 chr15 77348597 - Exonic hg19 LUAD TCGA-MP-A4T8 2 In-Frame Intra-chr q24.3 q24.3 7870 ChimerSeq FusionScan TCGA_RNA-Seq TOP1-CDH4 TOP1 chr20 39658095 + CDH4 chr20 60318618 + Exonic hg19 LUAD TCGA-05-4244 4 In-Frame Intra-chr q12 Oncogene q13.33 Tumor suppressor gene Seq+ 7871 ChimerSeq FusionScan TCGA_RNA-Seq MYO6-SENP6 MYO6 chr6 76459140 + SENP6 chr6 76385575 + Exonic hg19 LUAD TCGA-05-4244 2 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 7872 ChimerSeq FusionScan TCGA_RNA-Seq SSR1-FARS2 SSR1 chr6 7303782 - FARS2 chr6 5545412 + Exonic hg19 LUAD TCGA-62-A46S 7 In-Frame Intra-chr p24.3 p25.1 Seq+ 7873 ChimerSeq FusionScan TCGA_RNA-Seq NUMA1-DHCR7 NUMA1 chr11 71717080 - DHCR7 chr11 71150129 - Exonic hg19 LUAD TCGA-62-A46S 3 Out-of-Frame Intra-chr q13.4 Oncogene q13.4 Seq+ 7874 ChimerSeq FusionScan TCGA_RNA-Seq MINK1-NQO2 MINK1 chr17 4736935 + NQO2 chr6 3010258 + Exonic hg19 LUAD TCGA-50-8460 2 Out-of-Frame Inter-chr p13.2 p25.2 Seq+ 7875 ChimerSeq FusionScan TCGA_RNA-Seq STAT4-CXCR7 STAT4 chr2 192011338 - CXCR7 chr2 237489082 + Exonic hg19 LUAD TCGA-05-4398 3 CDS-5'UTR Intra-chr q32.3 Transcription factor Seq+ 7876 ChimerSeq FusionScan TCGA_RNA-Seq ATP2B4-ERBB4 ATP2B4 chr1 203596347 + ERBB4 chr2 212989628 - Exonic hg19 LUAD TCGA-05-4398 2 5'UTR-CDS Inter-chr q32.1 q34 Oncogene Tumor suppressor gene Seq+ 7877 ChimerSeq FusionScan TCGA_RNA-Seq PTPRK-KGFLP1 PTPRK chr6 128505576 - KGFLP1 chr9 46744176 + Exonic hg19 LUAD TCGA-80-5608 2 CDS-5'UTR Inter-chr Tumor suppressor gene 7878 ChimerSeq FusionScan TCGA_RNA-Seq ARID1B-PARK2 ARID1B chr6 157150555 + PARK2 chr6 162864505 - Exonic hg19 LUAD TCGA-80-5608 2 Out-of-Frame Intra-chr q25.3 Oncogene Tumor suppressor gene Seq+ 7879 ChimerSeq FusionScan TCGA_RNA-Seq NUP54-CXCL9 NUP54 chr4 77045801 - CXCL9 chr4 76927427 - Exonic hg19 LUAD TCGA-69-8255 2 Out-of-Frame Intra-chr q21.1 q21.1 Seq+ 7880 ChimerSeq FusionScan TCGA_RNA-Seq CLIP1-KNTC1 CLIP1 chr12 122837272 - KNTC1 chr12 123062218 + Exonic hg19 LUAD TCGA-49-4514 5 In-Frame Intra-chr q24.31 q24.31 Seq+ 7881 ChimerSeq FusionScan TCGA_RNA-Seq ITGA9-SEC13 ITGA9 chr3 37792060 + SEC13 chr3 10347376 - Exonic hg19 LUAD TCGA-MP-A4TK 3 In-Frame Intra-chr p22.2 Oncogene p25.3 Seq+ 7882 ChimerSeq FusionScan TCGA_RNA-Seq PCSK5-OSTF1 PCSK5 chr9 78506289 + OSTF1 chr9 77761598 + Exonic hg19 LUAD TCGA-MP-A4TK 2 Out-of-Frame Intra-chr q21.13 q21.13 Seq+ 7883 ChimerSeq FusionScan TCGA_RNA-Seq ZNF343-PRPSAP2 ZNF343 chr20 2489526 - PRPSAP2 chr17 18827226 + Exonic hg19 LUAD TCGA-97-A4LX 2 5'UTR-CDS Inter-chr p13 Transcription factor p11.2 Seq+ 7884 ChimerSeq FusionScan TCGA_RNA-Seq C16orf52-OTOA C16orf52 chr16 22019728 + OTOA chr16 21752041 + Exonic hg19 LUAD TCGA-NJ-A4YF 4 In-Frame Intra-chr p12.2 Seq+ 7885 ChimerSeq FusionScan TCGA_RNA-Seq FAM168A-RAB6A FAM168A chr11 73308967 - RAB6A chr11 73390765 - Exonic hg19 LUAD TCGA-NJ-A4YF 3 5'UTR-CDS Intra-chr q13.4 q13.4 Seq+ 7886 ChimerSeq FusionScan TCGA_RNA-Seq KIF1A-C2orf54 KIF1A chr2 241682345 - C2orf54 chr2 241831180 - Exonic hg19 LUAD TCGA-NJ-A4YF 2 In-Frame Intra-chr q37.3 q37.3 Seq+ 7887 ChimerSeq FusionScan TCGA_RNA-Seq STK11-HMHA1 STK11 chr19 1222005 + HMHA1 chr19 1080253 + Exonic hg19 LUAD TCGA-NJ-A4YF 2 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene Seq+ 7888 ChimerSeq FusionScan TCGA_RNA-Seq PPM1B-ABCG8 PPM1B chr2 44445676 + ABCG8 chr2 44071645 + Exonic hg19 LUAD TCGA-NJ-A4YF 2 In-Frame Intra-chr p21 p21 Seq+ 7889 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 58003943 + VMP1 chr17 57917128 + Exonic hg19 LUAD TCGA-86-7711 2 Out-of-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 7890 ChimerSeq FusionScan TCGA_RNA-Seq NF1-PSMD11 NF1 chr17 29497015 + PSMD11 chr17 30773962 + Exonic hg19 LUAD TCGA-44-5644 2 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 7891 ChimerSeq FusionScan TCGA_RNA-Seq TTC28-ODF1 TTC28 chr22 29025539 - ODF1 chr8 103572679 + Exonic hg19 LUAD TCGA-44-5644 2 Out-of-Frame Inter-chr q12.1 q22.3 Seq+ 7892 ChimerSeq FusionScan TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104707254 + LHFPL3 chr7 104546633 + Exonic hg19 LUAD TCGA-44-5644 2 Out-of-Frame Intra-chr q22.2 Seq+ 7893 ChimerSeq FusionScan TCGA_RNA-Seq RAI1-MRGPRF RAI1 chr17 17585107 + MRGPRF chr11 68773729 - Exonic hg19 LUAD TCGA-93-8067 4 5'UTR-CDS Inter-chr p11.2 q13.3 Seq+ 7894 ChimerSeq FusionScan TCGA_RNA-Seq ZNF143-TMEM41B ZNF143 chr11 9482623 + TMEM41B chr11 9309353 - Exonic hg19 LUAD TCGA-93-8067 3 5'UTR-CDS Intra-chr p15.4 Transcription factor p15.4 Seq+ 7895 ChimerSeq FusionScan TCGA_RNA-Seq RHOT1-LRRC37B RHOT1 chr17 30469748 + LRRC37B chr17 30372718 + Exonic hg19 LUAD TCGA-93-8067 3 Out-of-Frame Intra-chr q11.2 q11.2 Seq+ 7896 ChimerSeq FusionScan TCGA_RNA-Seq STAT5B-NTN1 STAT5B chr17 40428265 - NTN1 chr17 9142956 + Exonic hg19 LUAD TCGA-93-8067 2 5'UTR-CDS Intra-chr q21.2 Transcription factor p13.1 Seq+ 7897 ChimerSeq FusionScan TCGA_RNA-Seq PAPSS2-BID PAPSS2 chr10 89469070 + BID chr22 18222254 - Exonic hg19 LUSC TCGA-77-A5GH 2 In-Frame Inter-chr q23.2 q11.21 Seq+ 7898 ChimerSeq FusionScan TCGA_RNA-Seq USP39-GGCX USP39 chr2 85868241 + GGCX chr2 85786198 - Exonic hg19 LUSC TCGA-77-A5GH 2 Out-of-Frame Intra-chr p11.2 p11.2 Seq+ 7899 ChimerSeq FusionScan TCGA_RNA-Seq TYK2-KEAP1 TYK2 chr19 10476192 - KEAP1 chr19 10602938 - Exonic hg19 LUSC TCGA-77-A5GH 2 In-Frame Intra-chr p13.2 TK:JakA p13.2 Oncogene Seq+ 7900 ChimerSeq FusionScan TCGA_RNA-Seq MEF2BNB-RFXANK MEF2BNB chr19 19302889 - RFXANK chr19 19304747 + Exonic hg19 LUSC TCGA-MF-A522 4 CDS-5'UTR Intra-chr p13.11 Seq+ 7901 ChimerSeq FusionScan TCGA_RNA-Seq EMP2-TERF2 EMP2 chr16 10637426 - TERF2 chr16 69419389 - Exonic hg19 LUSC TCGA-77-7463 3 In-Frame Intra-chr p13.13 Tumor suppressor gene q22.1 Transcription factor Seq+ 7902 ChimerSeq FusionScan TCGA_RNA-Seq EML1-TTLL5 EML1 chr14 100259880 + TTLL5 chr14 76349027 + Exonic hg19 LUSC TCGA-77-A5G6 4 Out-of-Frame Intra-chr q32.2 q24.3 Seq+ 7903 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KA5-ITPK1 RPS6KA5 chr14 91386549 - ITPK1 chr14 93483146 - Exonic hg19 LUSC TCGA-77-A5G6 2 Out-of-Frame Intra-chr q32.11 Seq+ 7904 ChimerSeq FusionScan TCGA_RNA-Seq TTLL5-RGS6 TTLL5 chr14 76249873 + RGS6 chr14 72921235 + Exonic hg19 LUSC TCGA-77-A5G6 2 In-Frame Intra-chr q24.3 q24.2 Seq+ 7905 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1L1-C15orf55 WHSC1L1 chr8 38184247 - C15orf55 chr15 34640169 + Exonic hg19 LUSC TCGA-60-2716 2 In-Frame Inter-chr p11.23 Tumor suppressor gene Seq+ 7906 ChimerSeq FusionScan TCGA_RNA-Seq GALNTL4-ST5 GALNTL4 chr11 11642905 - ST5 chr11 8772272 - Exonic hg19 LUSC TCGA-34-A5IX 5 CDS-5'UTR Intra-chr p15.4 Tumor suppressor gene Seq+ 7907 ChimerSeq FusionScan TCGA_RNA-Seq ETV6-LOH12CR1 ETV6 chr12 11803094 + LOH12CR1 chr12 12588561 + Exonic hg19 LUSC TCGA-34-A5IX 3 Out-of-Frame Intra-chr p13.2 Tumor suppressor gene Transcription factor Seq+ 7908 ChimerSeq FusionScan TCGA_RNA-Seq KAT6A-C8orf40 KAT6A chr8 41905895 - C8orf40 chr8 42401611 + Exonic hg19 LUSC TCGA-98-A53B 2 CDS-5'UTR Intra-chr p11.21 Oncogene 7909 ChimerSeq FusionScan TCGA_RNA-Seq NEMF-C14orf182 NEMF chr14 50307435 - C14orf182 chr14 50459591 - Exonic hg19 LUSC TCGA-37-3783 4 In-Frame Intra-chr q21.3 Seq+ 7910 ChimerSeq FusionScan TCGA_RNA-Seq CTTNBP2NL-CAPZA1 CTTNBP2NL chr1 112958886 + CAPZA1 chr1 113212164 + Exonic hg19 LUSC TCGA-18-3407 2 In-Frame Intra-chr p13.2 p13.2 Seq+ 7911 ChimerSeq FusionScan TCGA_RNA-Seq USP13-FXR1 USP13 chr3 179399791 + FXR1 chr3 180651121 + Exonic hg19 LUSC TCGA-85-8355 3 In-Frame Intra-chr q26.33 q26.33 Seq+ 7912 ChimerSeq FusionScan TCGA_RNA-Seq FAF1-OSBPL9 FAF1 chr1 51425438 - OSBPL9 chr1 52231493 + Exonic hg19 LUSC TCGA-85-8355 2 Out-of-Frame Intra-chr p32.3 p32.3 Seq+ 7913 ChimerSeq FusionScan TCGA_RNA-Seq ZNF678-CHMP1A ZNF678 chr1 227834371 + CHMP1A chr16 89713739 - Exonic hg19 LUSC TCGA-85-8355 2 In-Frame Inter-chr q42.13 Transcription factor q24.3 7914 ChimerSeq FusionScan TCGA_RNA-Seq METTL21B-RASSF3 METTL21B chr12 58166911 + RASSF3 chr12 65078566 + Exonic hg19 LUSC TCGA-43-2581 7 Out-of-Frame Intra-chr q14.2 Tumor suppressor gene Seq+ 7915 ChimerSeq FusionScan TCGA_RNA-Seq AVIL-TSFM AVIL chr12 58197029 - TSFM chr12 58186768 + Exonic hg19 LUSC TCGA-43-2581 4 In-Frame Intra-chr q14.1 q14.1 7916 ChimerSeq FusionScan TCGA_RNA-Seq ERICH1-IYD ERICH1 chr8 618597 - IYD chr6 150710487 + Exonic hg19 LUSC TCGA-94-7943 2 In-Frame Inter-chr q25.1 Seq+ 7917 ChimerSeq FusionScan TCGA_RNA-Seq EHBP1L1-FRMD8 EHBP1L1 chr11 65353062 + FRMD8 chr11 65178712 + Exonic hg19 LUSC TCGA-94-7943 2 Out-of-Frame Intra-chr q13.1 q13.1 Seq+ 7918 ChimerSeq FusionScan TCGA_RNA-Seq CTNNBIP1-PUS1 CTNNBIP1 chr1 9970152 - PUS1 chr12 132416719 + Exonic hg19 LUSC TCGA-56-8625 3 5'UTR-CDS Inter-chr p36.22 Tumor suppressor gene q24.33 7919 ChimerSeq FusionScan TCGA_RNA-Seq VPS13C-ANXA2 VPS13C chr15 62352473 - ANXA2 chr15 60678285 - Exonic hg19 LUSC TCGA-56-8625 2 In-Frame Intra-chr q22.2 q22.2 7920 ChimerSeq FusionScan TCGA_RNA-Seq PUS1-CTNNBIP1 PUS1 chr12 132416857 + CTNNBIP1 chr1 9938047 - Exonic hg19 LUSC TCGA-56-8625 2 CDS-5'UTR Inter-chr q24.33 p36.22 Tumor suppressor gene Seq+ 7921 ChimerSeq FusionScan TCGA_RNA-Seq XPA-CORO2A XPA chr9 100449377 - CORO2A chr9 100919942 - Exonic hg19 LUSC TCGA-96-A4JK 2 CDS-5'UTR Intra-chr q22.33 Oncogene Transcription factor q22.33 Seq+ 7922 ChimerSeq FusionScan TCGA_RNA-Seq RTN4R-DNAH2 RTN4R chr22 20255593 - DNAH2 chr17 7719888 + Exonic hg19 LUSC TCGA-96-A4JK 2 Out-of-Frame Inter-chr q11.21 p13.1 Seq+ 7923 ChimerSeq FusionScan TCGA_RNA-Seq MED15-DNAJC11 MED15 chr22 20862033 + DNAJC11 chr1 6700117 - Exonic hg19 LUSC TCGA-56-8304 2 In-Frame Inter-chr q11.21 p36.31 Tumor suppressor gene 7924 ChimerSeq FusionScan TCGA_RNA-Seq MDM2-NUP107 MDM2 chr12 69202271 + NUP107 chr12 69082741 + Exonic hg19 LUSC TCGA-NC-A5HE 4 In-Frame Intra-chr q15 Oncogene q15 Seq+ 7925 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-TBC1D4 CPSF6 chr12 69656342 + TBC1D4 chr13 75901962 - Exonic hg19 LUSC TCGA-39-5027 2 3'UTR-CDS Inter-chr q15 q22.2 7926 ChimerSeq FusionScan TCGA_RNA-Seq PARP8-CRYL1 PARP8 chr5 49963959 + CRYL1 chr13 20987526 - Exonic hg19 LUSC TCGA-56-7823 4 Out-of-Frame Inter-chr q11.1 q12.11 Seq+ 7927 ChimerSeq FusionScan TCGA_RNA-Seq TFDP1-ATP11A TFDP1 chr13 114240164 + ATP11A chr13 113439448 + Exonic hg19 LUSC TCGA-56-7823 3 In-Frame Intra-chr q34 Transcription factor q34 Seq+ 7928 ChimerSeq FusionScan TCGA_RNA-Seq ATP11B-FXR1 ATP11B chr3 182511574 + FXR1 chr3 180685838 + Exonic hg19 LUSC TCGA-56-7823 2 Out-of-Frame Intra-chr q26.33 Oncogene q26.33 Seq+ 7929 ChimerSeq FusionScan TCGA_RNA-Seq RAB4B-ADCK4 RAB4B chr19 41284296 + ADCK4 chr19 41201959 - Exonic hg19 LUSC TCGA-43-7657 5 Out-of-Frame Intra-chr q13.2 Atypical:ABC1 Seq+ 7930 ChimerSeq FusionScan TCGA_RNA-Seq CELF1-CHMP4B CELF1 chr11 47574543 - CHMP4B chr20 32438757 + Exonic hg19 LUSC TCGA-43-7657 4 5'UTR-CDS Inter-chr p11.2 q11.22 Seq+ 7931 ChimerSeq FusionScan TCGA_RNA-Seq ANK3-CDK1 ANK3 chr10 62493020 - CDK1 chr10 62544462 + Exonic hg19 LUSC TCGA-43-7657 2 Out-of-Frame Intra-chr q21.2 q21.2 Seq+ 7932 ChimerSeq FusionScan TCGA_RNA-Seq MATR3-PAIP2 MATR3 chr5 138629494 + PAIP2 chr5 138699447 + Exonic hg19 LUSC TCGA-43-7657 2 5'UTR-5'UTR Intra-chr q31.2 q31.2 Tumor suppressor gene 7933 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1L1-FGFR1 WHSC1L1 chr8 38162104 - FGFR1 chr8 38277253 - Exonic hg19 LUSC TCGA-77-8008 2 In-Frame Intra-chr p11.23 Tumor suppressor gene p11.23 TK:FGFR Oncogene Seq+ 7934 ChimerSeq FusionScan TCGA_RNA-Seq AKT2-MAP3K10 AKT2 chr19 40791087 - MAP3K10 chr19 40711817 + Exonic hg19 LUSC TCGA-85-A510 5 5'UTR-CDS Intra-chr q13.2 AGC:Akt Oncogene q13.2 Seq+ 7935 ChimerSeq FusionScan TCGA_RNA-Seq MAP3K10-C19orf47 MAP3K10 chr19 40715126 + C19orf47 chr19 40847797 - Exonic hg19 LUSC TCGA-85-A510 5 Out-of-Frame Intra-chr q13.2 q13.2 Seq+ 7936 ChimerSeq FusionScan TCGA_RNA-Seq AKT2-MAP3K10 AKT2 chr19 40791087 - MAP3K10 chr19 40715009 + Exonic hg19 LUSC TCGA-85-A510 3 5'UTR-CDS Intra-chr q13.2 AGC:Akt Oncogene q13.2 Seq+ 7937 ChimerSeq FusionScan TCGA_RNA-Seq TXNRD1-GLT8D2 TXNRD1 chr12 104682818 + GLT8D2 chr12 104415269 - Exonic hg19 LUSC TCGA-33-AASB 9 5'UTR-5'UTR Intra-chr q23.3 q23.3 Seq+ 7938 ChimerSeq FusionScan TCGA_RNA-Seq TXNRD1-GLT8D2 TXNRD1 chr12 104682818 + GLT8D2 chr12 104413454 - Exonic hg19 LUSC TCGA-33-AASB 5 5'UTR-5'UTR Intra-chr q23.3 q23.3 Seq+ 7939 ChimerSeq FusionScan TCGA_RNA-Seq TXNRD1-GLT8D2 TXNRD1 chr12 104680887 + GLT8D2 chr12 104413454 - Exonic hg19 LUSC TCGA-33-AASB 4 5'UTR-5'UTR Intra-chr q23.3 q23.3 Seq+ 7940 ChimerSeq FusionScan TCGA_RNA-Seq RHOQ-EPAS1 RHOQ chr2 46770951 + EPAS1 chr2 46596965 + Exonic hg19 LUSC TCGA-33-AASB 2 Out-of-Frame Intra-chr p21 p21 Tumor suppressor gene Transcription factor 7941 ChimerSeq FusionScan TCGA_RNA-Seq TXNRD1-GLT8D2 TXNRD1 chr12 104681124 + GLT8D2 chr12 104415269 - Exonic hg19 LUSC TCGA-33-AASB 2 5'UTR-5'UTR Intra-chr q23.3 q23.3 Seq+ 7942 ChimerSeq FusionScan TCGA_RNA-Seq TXNRD1-GLT8D2 TXNRD1 chr12 104680887 + GLT8D2 chr12 104415269 - Exonic hg19 LUSC TCGA-33-AASB 2 5'UTR-5'UTR Intra-chr q23.3 q23.3 Seq+ 7943 ChimerSeq FusionScan TCGA_RNA-Seq GNL3-MANF GNL3 chr3 52720121 + MANF chr3 51423638 + Exonic hg19 LUSC TCGA-33-AASB 2 In-Frame Intra-chr p21.1 p21.2 Seq+ 7944 ChimerSeq FusionScan TCGA_RNA-Seq TULP4-ESR1 TULP4 chr6 158735300 + ESR1 chr6 152201789 + Exonic hg19 LUSC TCGA-66-2788 3 Out-of-Frame Intra-chr q25.3 q25.1 Oncogene Tumor suppressor gene Transcription factor Seq+ 7945 ChimerSeq FusionScan TCGA_RNA-Seq CUX1-AHCYL2 CUX1 chr7 101459373 + AHCYL2 chr7 129019481 + Exonic hg19 LUSC TCGA-22-5480 2 In-Frame Intra-chr q22.1 Tumor suppressor gene Transcription factor q32.1 Seq+ 7946 ChimerSeq FusionScan TCGA_RNA-Seq UBE2Q2-FBXO22 UBE2Q2 chr15 76146828 + FBXO22 chr15 76205543 + Exonic hg19 LUSC TCGA-21-5786 4 In-Frame Intra-chr q24.2 q24.2 7947 ChimerSeq FusionScan TCGA_RNA-Seq SETD6-IFT172 SETD6 chr16 58550832 + IFT172 chr2 27672963 - Exonic hg19 LUSC TCGA-21-5786 2 In-Frame Inter-chr q21 p23.3 7948 ChimerSeq FusionScan TCGA_RNA-Seq DCAF8-NME7 DCAF8 chr1 160231074 - NME7 chr1 169279318 - Exonic hg19 LUSC TCGA-18-3417 2 5'UTR-CDS Intra-chr q23.2 q24.2 Seq+ 7949 ChimerSeq FusionScan TCGA_RNA-Seq CARS-NAP1L4 CARS chr11 3068982 - NAP1L4 chr11 3000467 - Exonic hg19 LUSC TCGA-18-3417 2 CDS-5'UTR Intra-chr 7950 ChimerSeq FusionScan TCGA_RNA-Seq TUBD1-PTRH2 TUBD1 chr17 57958254 - PTRH2 chr17 57775339 - Exonic hg19 LUSC TCGA-66-2768 2 CDS-5'UTR Intra-chr q23.1 q23.1 Seq+ 7951 ChimerSeq FusionScan TCGA_RNA-Seq CARD11-FSCN1 CARD11 chr7 2972168 - FSCN1 chr7 5642887 + Exonic hg19 LUSC TCGA-66-2768 2 In-Frame Intra-chr p22.2 Oncogene p22.1 7952 ChimerSeq FusionScan TCGA_RNA-Seq DIAPH1-CYSTM1 DIAPH1 chr5 140998364 - CYSTM1 chr5 139622889 + Exonic hg19 LUSC TCGA-66-2768 2 Out-of-Frame Intra-chr q31.3 q31.3 Seq+ 7953 ChimerSeq FusionScan TCGA_RNA-Seq GNB1-CALML6 GNB1 chr1 1822258 - CALML6 chr1 1847879 + Exonic hg19 LUSC TCGA-34-8454 5 5'UTR-CDS Intra-chr p36.33 p36.33 Seq+ 7954 ChimerSeq FusionScan TCGA_RNA-Seq GNB1-CALML6 GNB1 chr1 1822258 - CALML6 chr1 1848190 + Exonic hg19 LUSC TCGA-34-8454 2 5'UTR-CDS Intra-chr p36.33 p36.33 Seq+ 7955 ChimerSeq FusionScan TCGA_RNA-Seq FNDC3B-SLC7A14 FNDC3B chr3 171757561 + SLC7A14 chr3 170204157 - Exonic hg19 LUSC TCGA-51-6867 7 5'UTR-CDS Intra-chr q26.31 q26.2 Seq+ 7956 ChimerSeq FusionScan TCGA_RNA-Seq FNDC3B-SLC7A14 FNDC3B chr3 171758414 + SLC7A14 chr3 170204157 - Exonic hg19 LUSC TCGA-51-6867 5 5'UTR-CDS Intra-chr q26.31 q26.2 Seq+ 7957 ChimerSeq FusionScan TCGA_RNA-Seq DLG1-WDR53 DLG1 chr3 197009549 - WDR53 chr3 196288362 - Exonic hg19 LUSC TCGA-51-6867 5 CDS-5'UTR Intra-chr q29 Tumor suppressor gene q29 Seq+ 7958 ChimerSeq FusionScan TCGA_RNA-Seq B4GALT5-ZFP64 B4GALT5 chr20 48330112 - ZFP64 chr20 50769967 - Exonic hg19 LUSC TCGA-51-6867 2 In-Frame Intra-chr q13.13 q13.2 Transcription factor Seq+ 7959 ChimerSeq FusionScan TCGA_RNA-Seq GALNT2-EYS GALNT2 chr1 230203153 + EYS chr6 64436573 - Exonic hg19 LUSC TCGA-51-6867 2 Out-of-Frame Inter-chr q42.13 q12 Seq+ 7960 ChimerSeq FusionScan TCGA_RNA-Seq STON2-CEP128 STON2 chr14 81893445 - CEP128 chr14 81372425 - Exonic hg19 LUSC TCGA-O2-A52S 2 5'UTR-CDS Intra-chr q31.1 q31.1 7961 ChimerSeq FusionScan TCGA_RNA-Seq PHGDH-HMGCS2 PHGDH chr1 120283141 + HMGCS2 chr1 120295297 - Exonic hg19 LUSC TCGA-85-8277 7 In-Frame Intra-chr p12 p12 Seq+ 7962 ChimerSeq FusionScan TCGA_RNA-Seq NOTCH2-SEC22B NOTCH2 chr1 120539619 - SEC22B chr1 145115734 + Exonic hg19 LUSC TCGA-85-8277 3 In-Frame Intra-chr p12 Oncogene Tumor suppressor gene p12 Seq+ 7963 ChimerSeq FusionScan TCGA_RNA-Seq DNMBP-TPTE2 DNMBP chr10 101769594 - TPTE2 chr13 20012293 - Exonic hg19 LUSC TCGA-60-2720 3 5'UTR-CDS Inter-chr q24.2 q12.11 Tumor suppressor gene Seq+ 7964 ChimerSeq FusionScan TCGA_RNA-Seq GART-TMEM50B GART chr21 34914370 - TMEM50B chr21 34811604 - Exonic hg19 LUSC TCGA-77-7337 2 5'UTR-3'UTR Intra-chr Seq+ 7965 ChimerSeq FusionScan TCGA_RNA-Seq PSME4-FLJ30838 PSME4 chr2 54146287 - FLJ30838 chr2 59231083 + Exonic hg19 LUSC TCGA-39-5028 2 CDS-5'UTR Intra-chr p16.2 7966 ChimerSeq FusionScan TCGA_RNA-Seq TP63-LEPREL1 TP63 chr3 189507631 + LEPREL1 chr3 189705458 - Exonic hg19 LUSC TCGA-39-5028 2 Out-of-Frame Intra-chr q28 Tumor suppressor gene Transcription factor Seq+ 7967 ChimerSeq FusionScan TCGA_RNA-Seq ABCA1-ZBTB6 ABCA1 chr9 107645319 - ZBTB6 chr9 125674360 - Exonic hg19 LUSC TCGA-39-5028 2 CDS-5'UTR Intra-chr q31.1 q33.2 Transcription factor Seq+ 7968 ChimerSeq FusionScan TCGA_RNA-Seq GCN1L1-RPLP0 GCN1L1 chr12 120568449 - RPLP0 chr12 120635265 - Exonic hg19 LUSC TCGA-21-5782 2 In-Frame Intra-chr q24.23 Seq+ 7969 ChimerSeq FusionScan TCGA_RNA-Seq SMAD4-NRG1 SMAD4 chr18 48556993 + NRG1 chr8 32585466 + Exonic hg19 LUSC TCGA-63-A5MP 4 5'UTR-CDS Inter-chr q21.2 Oncogene Tumor suppressor gene Transcription factor p12 Seq+ 7970 ChimerSeq FusionScan TCGA_RNA-Seq PIGX-CEP19 PIGX chr3 196449427 + CEP19 chr3 196435598 - Exonic hg19 LUSC TCGA-63-A5MP 4 CDS-5'UTR Intra-chr q29 q29 7971 ChimerSeq FusionScan TCGA_RNA-Seq GCN1L1-RPLP0 GCN1L1 chr12 120628100 - RPLP0 chr12 120635265 - Exonic hg19 LUSC TCGA-63-A5MP 3 Out-of-Frame Intra-chr q24.23 Seq+ 7972 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1L1-DDHD2 WHSC1L1 chr8 38178589 - DDHD2 chr8 38095606 + Exonic hg19 LUSC TCGA-63-A5MP 2 In-Frame Intra-chr p11.23 Tumor suppressor gene p11.23 Seq+ 7973 ChimerSeq FusionScan TCGA_RNA-Seq KDM4A-ST3GAL3 KDM4A chr1 44137546 + ST3GAL3 chr1 44201903 + Exonic hg19 LUSC TCGA-63-A5MP 2 CDS-5'UTR Intra-chr p34.2 p34.1 7974 ChimerSeq FusionScan TCGA_RNA-Seq NAALADL2-ABCC5 NAALADL2 chr3 175345174 + ABCC5 chr3 183643507 - Exonic hg19 LUSC TCGA-33-4538 4 In-Frame Intra-chr q26.31 q27.1 Seq+ 7975 ChimerSeq FusionScan TCGA_RNA-Seq ADAM23-CERKL ADAM23 chr2 207424842 + CERKL chr2 182468806 - Exonic hg19 LUSC TCGA-33-4538 2 Out-of-Frame Intra-chr q33.3 q31.3 Seq+ 7976 ChimerSeq FusionScan TCGA_RNA-Seq MAP7D2-GTF2I MAP7D2 chrX 20070995 - GTF2I chr7 74171151 + Exonic hg19 LUSC TCGA-33-4538 2 In-Frame Inter-chr p22.12 q11.23 Transcription factor 7977 ChimerSeq FusionScan TCGA_RNA-Seq ADAM9-RNF170 ADAM9 chr8 38865502 + RNF170 chr8 42716998 - Exonic hg19 LUSC TCGA-21-1076 8 In-Frame Intra-chr p11.21 Seq+ 7978 ChimerSeq FusionScan TCGA_RNA-Seq NPLOC4-P4HB NPLOC4 chr17 79596750 - P4HB chr17 79805223 - Exonic hg19 LUSC TCGA-21-1076 5 In-Frame Intra-chr q25.3 q25.3 Seq+ 7979 ChimerSeq FusionScan TCGA_RNA-Seq ITGB4-RBM39 ITGB4 chr17 73720862 + RBM39 chr20 34301018 - Exonic hg19 LUSC TCGA-21-1076 2 In-Frame Inter-chr q25.1 q11.22 7980 ChimerSeq FusionScan TCGA_RNA-Seq BRD9-CEP72 BRD9 chr5 891269 - CEP72 chr5 647919 + Exonic hg19 LUSC TCGA-90-6837 3 In-Frame Intra-chr p15.33 Seq+ 7981 ChimerSeq FusionScan TCGA_RNA-Seq WDR45L-B3GNTL1 WDR45L chr17 80601824 - B3GNTL1 chr17 80904859 - Exonic hg19 LUSC TCGA-90-6837 3 Out-of-Frame Intra-chr Seq+ 7982 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57728677 + VMP1 chr17 57915655 + Exonic hg19 LUSC TCGA-77-7142 8 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 7983 ChimerSeq FusionScan TCGA_RNA-Seq NF1-RNF135 NF1 chr17 29422387 + RNF135 chr17 29324259 + Exonic hg19 LUSC TCGA-77-7142 3 Out-of-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 7984 ChimerSeq FusionScan TCGA_RNA-Seq SERINC5-THBS4 SERINC5 chr5 79470776 - THBS4 chr5 79372677 + Exonic hg19 LUSC TCGA-77-7142 3 In-Frame Intra-chr q14.1 q14.1 Seq+ 7985 ChimerSeq FusionScan TCGA_RNA-Seq PDE4D-RAB3C PDE4D chr5 59064072 - RAB3C chr5 58120864 + Exonic hg19 LUSC TCGA-77-7142 2 In-Frame Intra-chr q12.1 q11.2 Seq+ 7986 ChimerSeq FusionScan TCGA_RNA-Seq TEC-HMGCLL1 TEC chr4 48230493 - HMGCLL1 chr6 55304357 - Exonic hg19 LUSC TCGA-56-A49D 2 In-Frame Inter-chr p11 TK:Tec Tumor suppressor gene p12.1 Seq+ 7987 ChimerSeq FusionScan TCGA_RNA-Seq GNE-ROCK1 GNE chr9 36236828 - ROCK1 chr18 18650574 - Exonic hg19 LUSC TCGA-56-A49D 2 Out-of-Frame Inter-chr p13.3 q11.1 AGC:DMPK Seq+ 7988 ChimerSeq FusionScan TCGA_RNA-Seq RBM25-VPS26A RBM25 chr14 73566458 + VPS26A chr10 70892653 + Exonic hg19 LUSC TCGA-56-A49D 2 In-Frame Inter-chr q24.2 q22.1 7989 ChimerSeq FusionScan TCGA_RNA-Seq BTBD3-TASP1 BTBD3 chr20 11871602 + TASP1 chr20 13415801 - Exonic hg19 LUSC TCGA-66-2769 2 5'UTR-CDS Intra-chr p12.2 p12.1 7990 ChimerSeq FusionScan TCGA_RNA-Seq ABR-GAS7 ABR chr17 1082960 - GAS7 chr17 9923214 - Exonic hg19 LUSC TCGA-66-2769 2 Out-of-Frame Intra-chr p13.3 p13.1 Seq+ 7991 ChimerSeq FusionScan TCGA_RNA-Seq IKBKB-ANK1 IKBKB chr8 42129723 + ANK1 chr8 41615655 - Exonic hg19 LUSC TCGA-96-8170 4 In-Frame Intra-chr p11.21 Oncogene p11.21 Seq+ 7992 ChimerSeq FusionScan TCGA_RNA-Seq NADSYN1-C11orf34 NADSYN1 chr11 71192450 + C11orf34 chr11 112123132 - Exonic hg19 LUSC TCGA-18-4086 3 Out-of-Frame Intra-chr q13.4 Seq+ 7993 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-CREBZF CPSF6 chr12 69656342 + CREBZF chr11 85371641 - Exonic hg19 LUSC TCGA-18-4086 2 3'UTR-3'UTR Inter-chr q15 q14.1 Transcription factor 7994 ChimerSeq FusionScan TCGA_RNA-Seq FYN-DYM FYN chr6 112101768 - DYM chr18 46812986 - Exonic hg19 LUSC TCGA-18-4086 2 5'UTR-CDS Inter-chr q21 TK:Src q21.1 7995 ChimerSeq FusionScan TCGA_RNA-Seq RPRD1B-C20orf111 RPRD1B chr20 36662500 + C20orf111 chr20 42835638 - Exonic hg19 LUSC TCGA-18-4086 2 CDS-5'UTR Intra-chr q11.23 7996 ChimerSeq FusionScan TCGA_RNA-Seq RALA-C7orf10 RALA chr7 39663424 + C7orf10 chr7 40789032 + Exonic hg19 LUSC TCGA-85-8354 2 5'UTR-CDS Intra-chr p14.1 Seq+ 7997 ChimerSeq FusionScan TCGA_RNA-Seq DANCR-FAM192A DANCR chr4 53579126 + FAM192A chr16 57207781 - Exonic hg19 LUSC TCGA-77-A5G7 2 5'UTR-5'UTR Inter-chr q12 q13 Seq+ 7998 ChimerSeq FusionScan TCGA_RNA-Seq RPS27A-MIR4426 RPS27A chr2 55462098 + MIR4426 chr2 55461299 + Exonic hg19 LUSC TCGA-21-1083 2 CDS-5'UTR Intra-chr p16.1 q31.2 7999 ChimerSeq FusionScan TCGA_RNA-Seq SMAD2-CD226 SMAD2 chr18 45456731 - CD226 chr18 67563281 - Exonic hg19 LUSC TCGA-21-1083 2 5'UTR-CDS Intra-chr q21.1 Oncogene Tumor suppressor gene q22.2 Seq+ 8000 ChimerSeq FusionScan TCGA_RNA-Seq B4GALT4-ACSL5 B4GALT4 chr3 118945655 - ACSL5 chr10 114182082 + Exonic hg19 LUSC TCGA-56-5897 3 In-Frame Inter-chr q13.32 q25.2 Seq+ 8001 ChimerSeq FusionScan TCGA_RNA-Seq MRC2-VMP1 MRC2 chr17 60751531 + VMP1 chr17 57917128 + Exonic hg19 LUSC TCGA-58-8386 6 In-Frame Intra-chr q23.2 q23.1 Seq+ 8002 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D23-C3orf26 TBC1D23 chr3 100009545 + C3orf26 chr3 99879273 + Exonic hg19 LUSC TCGA-58-8386 3 In-Frame Intra-chr q12.1 Seq+ 8003 ChimerSeq FusionScan TCGA_RNA-Seq SBF2-PRMT3 SBF2 chr11 10315561 - PRMT3 chr11 20473675 + Exonic hg19 LUSC TCGA-37-4132 4 Out-of-Frame Intra-chr p15.4 p15.1 Transcription factor Seq+ 8004 ChimerSeq FusionScan TCGA_RNA-Seq ZNRF3-ZC3H7B ZNRF3 chr22 29383189 + ZC3H7B chr22 41716658 + Exonic hg19 LUSC TCGA-68-A59I 4 CDS-5'UTR Intra-chr q12.1 q13.2 Seq+ 8005 ChimerSeq FusionScan TCGA_RNA-Seq ZNF219-NDRG2 ZNF219 chr14 21566969 - NDRG2 chr14 21491480 - Exonic hg19 LUSC TCGA-66-2770 2 5'UTR-5'UTR Intra-chr q11.2 Transcription factor q11.2 Tumor suppressor gene 8006 ChimerSeq FusionScan TCGA_RNA-Seq KIF13A-CCHCR1 KIF13A chr6 17849607 - CCHCR1 chr6 31113585 - Exonic hg19 LUSC TCGA-77-8138 2 CDS-5'UTR Intra-chr p22.3 Seq+ 8007 ChimerSeq FusionScan TCGA_RNA-Seq PTP4A1-GTPBP6 PTP4A1 chr6 64282624 + GTPBP6 chrY 174547 - Exonic hg19 LUSC TCGA-98-8021 2 5'UTR-CDS Inter-chr q12 p22.33 8008 ChimerSeq FusionScan TCGA_RNA-Seq MLL2-DDX23 MLL2 chr12 49418592 - DDX23 chr12 49239565 - Exonic hg19 LUSC TCGA-56-A62T 2 CDS-5'UTR Intra-chr q13.12 8009 ChimerSeq FusionScan TCGA_RNA-Seq MLL2-DDX23 MLL2 chr12 49418360 - DDX23 chr12 49239565 - Exonic hg19 LUSC TCGA-56-A62T 2 CDS-5'UTR Intra-chr q13.12 8010 ChimerSeq FusionScan TCGA_RNA-Seq EXD3-PNPLA7 EXD3 chr9 140317565 - PNPLA7 chr9 140358908 - Exonic hg19 LUSC TCGA-46-3765 8 5'UTR-CDS Intra-chr q34.3 q34.3 Seq+ 8011 ChimerSeq FusionScan TCGA_RNA-Seq MCCC1-ADAMTSL3 MCCC1 chr3 182817139 - ADAMTSL3 chr15 84558860 + Exonic hg19 LUSC TCGA-46-3765 4 Out-of-Frame Inter-chr q27.1 q25.2 Seq+ 8012 ChimerSeq FusionScan TCGA_RNA-Seq SRPK2-LRP5 SRPK2 chr7 105029094 - LRP5 chr11 68213903 + Exonic hg19 LUSC TCGA-85-8352 5 Out-of-Frame Inter-chr q22.3 CMGC:SRPK q13.2 Seq+ 8013 ChimerSeq FusionScan TCGA_RNA-Seq IL1RN-FTL IL1RN chr2 113877705 + FTL chr19 49469537 + Exonic hg19 LUSC TCGA-56-7731 2 Out-of-Frame Inter-chr q14.1 q13.33 8014 ChimerSeq FusionScan TCGA_RNA-Seq PIGR-SFTPA1 PIGR chr1 207108830 - SFTPA1 chr10 81373492 + Exonic hg19 LUSC TCGA-56-7731 2 In-Frame Inter-chr q32.1 q22.3 8015 ChimerSeq FusionScan TCGA_RNA-Seq DIDO1-RPS4X DIDO1 chr20 61569147 - RPS4X chrX 71495574 - Exonic hg19 LUSC TCGA-43-3920 10 5'UTR-3'UTR Inter-chr q13.33 Tumor suppressor gene q13.1 Seq+ 8016 ChimerSeq FusionScan TCGA_RNA-Seq ART3-NUP54 ART3 chr4 77025122 + NUP54 chr4 77036647 - Exonic hg19 LUSC TCGA-43-3920 4 Out-of-Frame Intra-chr q21.1 q21.1 Seq+ 8017 ChimerSeq FusionScan TCGA_RNA-Seq UNK-DPYD UNK chr17 73781065 + DPYD chr1 98058943 - Exonic hg19 LUSC TCGA-43-3920 2 Out-of-Frame Inter-chr q25.1 p21.3 Oncogene Seq+ 8018 ChimerSeq FusionScan TCGA_RNA-Seq PUM1-EIF4G3 PUM1 chr1 31532050 - EIF4G3 chr1 21329301 - Exonic hg19 LUSC TCGA-34-5239 2 CDS-5'UTR Intra-chr p35.2 p36.12 Seq+ 8019 ChimerSeq FusionScan TCGA_RNA-Seq TBCD-ASPSCR1 TBCD chr17 80730383 + ASPSCR1 chr17 79967361 + Exonic hg19 LUSC TCGA-39-5034 2 In-Frame Intra-chr q25.3 Seq+ 8020 ChimerSeq FusionScan TCGA_RNA-Seq AGAP1-DIS3L2 AGAP1 chr2 236715975 + DIS3L2 chr2 233164749 + Exonic hg19 LUSC TCGA-39-5034 2 In-Frame Intra-chr q37.2 q37.1 8021 ChimerSeq FusionScan TCGA_RNA-Seq SOLH-DECR2 SOLH chr16 578029 + DECR2 chr16 454955 + Exonic hg19 LUSC TCGA-39-5034 2 5'UTR-CDS Intra-chr 8022 ChimerSeq FusionScan TCGA_RNA-Seq YAP1-BIRC2 YAP1 chr11 102080295 + BIRC2 chr11 102248226 + Exonic hg19 LUSC TCGA-22-1016 5 CDS-5'UTR Intra-chr q22.1 Tumor suppressor gene q22.2 Oncogene Seq+ 8023 ChimerSeq FusionScan TCGA_RNA-Seq ATP6V1F-C7orf58 ATP6V1F chr7 128503116 + C7orf58 chr7 120935493 + Exonic hg19 LUSC TCGA-39-5011 6 Out-of-Frame Intra-chr q32.1 Seq+ 8024 ChimerSeq FusionScan TCGA_RNA-Seq SYPL1-TMEM168 SYPL1 chr7 105738135 - TMEM168 chr7 112407799 - Exonic hg19 LUSC TCGA-39-5011 5 Out-of-Frame Intra-chr q22.3 q31.1 Seq+ 8025 ChimerSeq FusionScan TCGA_RNA-Seq AKAP9-PPP2R3B AKAP9 chr7 91570461 + PPP2R3B chrX 322325 - Exonic hg19 LUSC TCGA-39-5011 3 Out-of-Frame Inter-chr q21.2 Oncogene p22.33 Seq+ 8026 ChimerSeq FusionScan TCGA_RNA-Seq HIPK2-GRM8 HIPK2 chr7 139285162 - GRM8 chr7 126249552 - Exonic hg19 LUSC TCGA-39-5011 2 Out-of-Frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q31.33 Oncogene Seq+ 8027 ChimerSeq FusionScan TCGA_RNA-Seq SIK2-CARD17 SIK2 chr11 111491126 + CARD17 chr11 104970148 - Exonic hg19 LUSC TCGA-94-7557 4 In-Frame Intra-chr q23.1 q22.3 Seq+ 8028 ChimerSeq FusionScan TCGA_RNA-Seq MARK2-BUB1B MARK2 chr11 63607032 + BUB1B chr15 40468677 + Exonic hg19 LUSC TCGA-94-7557 3 In-Frame Inter-chr q13.1 CAMK:CAMKL q15.1 Oncogene Seq+ 8029 ChimerSeq FusionScan TCGA_RNA-Seq STIP1-PAK1 STIP1 chr11 63953742 + PAK1 chr11 77043912 - Exonic hg19 LUSC TCGA-94-7557 2 In-Frame Intra-chr q13.1 q14.1 STE:STE20 Seq+ 8030 ChimerSeq FusionScan TCGA_RNA-Seq PTEN-EMX2 PTEN chr10 89653866 + EMX2 chr10 119305142 + Exonic hg19 LUSC TCGA-94-7557 2 Out-of-Frame Intra-chr q23.31 Oncogene Tumor suppressor gene q26.11 Transcription factor Seq+ 8031 ChimerSeq FusionScan TCGA_RNA-Seq CEP170-RAD51B CEP170 chr1 243349080 - RAD51B chr14 68758600 + Exonic hg19 LUSC TCGA-85-6798 2 In-Frame Inter-chr q24.1 8032 ChimerSeq FusionScan TCGA_RNA-Seq ZNF519-IMPA2 ZNF519 chr18 14132273 - IMPA2 chr18 11999052 + Exonic hg19 LUSC TCGA-85-6798 2 In-Frame Intra-chr p11.21 Transcription factor p11.21 8033 ChimerSeq FusionScan TCGA_RNA-Seq CRK-STX8 CRK chr17 1359170 - STX8 chr17 9153962 - Exonic hg19 LUSC TCGA-85-A4CN 2 In-Frame Intra-chr p13.3 p13.1 Seq+ 8034 ChimerSeq FusionScan TCGA_RNA-Seq FAM98C-BLVRB FAM98C chr19 38894334 + BLVRB chr19 40964452 - Exonic hg19 LUSC TCGA-LA-A7SW 5 In-Frame Intra-chr q13.2 q13.2 Seq+ 8035 ChimerSeq FusionScan TCGA_RNA-Seq SLBP-LETM1 SLBP chr4 1713600 - LETM1 chr4 1817529 - Exonic hg19 LUSC TCGA-LA-A7SW 4 In-Frame Intra-chr p16.3 p16.3 Seq+ 8036 ChimerSeq FusionScan TCGA_RNA-Seq PCNXL3-PACS1 PCNXL3 chr11 65391115 + PACS1 chr11 66006274 + Exonic hg19 LUSC TCGA-LA-A7SW 3 In-Frame Intra-chr q13.1 Seq+ 8037 ChimerSeq FusionScan TCGA_RNA-Seq URM1-C9orf3 URM1 chr9 131133694 + C9orf3 chr9 97822975 + Exonic hg19 LUSC TCGA-LA-A7SW 3 Out-of-Frame Intra-chr q34.11 q22.32 Seq+ 8038 ChimerSeq FusionScan TCGA_RNA-Seq EIF2S2-ADRA1D EIF2S2 chr20 32678322 - ADRA1D chr20 4202777 - Exonic hg19 LUSC TCGA-LA-A7SW 3 In-Frame Intra-chr q11.22 p13 Seq+ 8039 ChimerSeq FusionScan TCGA_RNA-Seq ROCK1-CDH2 ROCK1 chr18 18571136 - CDH2 chr18 25532323 - Exonic hg19 LUSC TCGA-LA-A7SW 2 Out-of-Frame Intra-chr q11.1 AGC:DMPK q12.1 Oncogene Seq+ 8040 ChimerSeq FusionScan TCGA_RNA-Seq HGS-GNAO1 HGS chr17 79654125 + GNAO1 chr16 56377674 + Exonic hg19 LUSC TCGA-37-3792 3 Out-of-Frame Inter-chr q25.3 q13 Seq+ 8041 ChimerSeq FusionScan TCGA_RNA-Seq IGFBP7-SPINK2 IGFBP7 chr4 57976042 - SPINK2 chr4 57686745 - Exonic hg19 LUSC TCGA-66-2744 4 In-Frame Intra-chr q12 Tumor suppressor gene q12 Seq+ 8042 ChimerSeq FusionScan TCGA_RNA-Seq RGNEF-BTF3 RGNEF chr5 72980709 + BTF3 chr5 72798312 + Exonic hg19 LUSC TCGA-22-4607 3 In-Frame Intra-chr q13.2 8043 ChimerSeq FusionScan TCGA_RNA-Seq CEBPG-PEPD CEBPG chr19 33864801 + PEPD chr19 33892775 - Exonic hg19 LUSC TCGA-22-4607 2 5'UTR-CDS Intra-chr q13.11 Transcription factor q13.11 8044 ChimerSeq FusionScan TCGA_RNA-Seq PIAS2-ST8SIA5 PIAS2 chr18 44407921 - ST8SIA5 chr18 44272218 - Exonic hg19 LUSC TCGA-58-8390 2 In-Frame Intra-chr q21.1 q21.1 Seq+ 8045 ChimerSeq FusionScan TCGA_RNA-Seq EHBP1-COMMD1 EHBP1 chr2 62991496 + COMMD1 chr2 62362965 + Exonic hg19 LUSC TCGA-63-A5MR 4 In-Frame Intra-chr p15 p15 Seq+ 8046 ChimerSeq FusionScan TCGA_RNA-Seq NFE2L2-ZC3H13 NFE2L2 chr2 178129259 - ZC3H13 chr13 46554139 - Exonic hg19 LUSC TCGA-18-3415 12 Out-of-Frame Inter-chr q31.2 Oncogene Transcription factor q14.13 Seq+ 8047 ChimerSeq FusionScan TCGA_RNA-Seq NFE2L2-ZC3H13 NFE2L2 chr2 178128130 - ZC3H13 chr13 46554139 - Exonic hg19 LUSC TCGA-18-3415 9 5'UTR-CDS Inter-chr q31.2 Oncogene Transcription factor q14.13 Seq+ 8048 ChimerSeq FusionScan TCGA_RNA-Seq HOOK2-RTBDN HOOK2 chr19 12885482 - RTBDN chr19 12937685 - Exonic hg19 LUSC TCGA-18-3415 6 Out-of-Frame Intra-chr p13.13 p13.13 Seq+ 8049 ChimerSeq FusionScan TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105614952 - OBFC1 chr10 105670380 - Exonic hg19 LUSC TCGA-18-3415 5 Out-of-Frame Intra-chr q24.33 Seq+ 8050 ChimerSeq FusionScan TCGA_RNA-Seq UBQLN1-LINC00152 UBQLN1 chr9 86322414 - LINC00152 chr2 87820725 + Exonic hg19 LUSC TCGA-18-3415 5 CDS-5'UTR Inter-chr q21.32 8051 ChimerSeq FusionScan TCGA_RNA-Seq C6orf62-FAM65B C6orf62 chr6 24716375 - FAM65B chr6 24818853 - Exonic hg19 LUSC TCGA-18-3415 3 In-Frame Intra-chr p22.3 Seq+ 8052 ChimerSeq FusionScan TCGA_RNA-Seq N4BP1-DDX19B N4BP1 chr16 48643685 - DDX19B chr16 70358487 + Exonic hg19 LUSC TCGA-94-A4VJ 2 Out-of-Frame Intra-chr q12.1 q22.1 Seq+ 8053 ChimerSeq FusionScan TCGA_RNA-Seq NINL-GINS1 NINL chr20 25507043 - GINS1 chr20 25397739 + Exonic hg19 LUSC TCGA-77-7465 2 Out-of-Frame Intra-chr p11.21 p11.21 Seq+ 8054 ChimerSeq FusionScan TCGA_RNA-Seq GLI3-CROT GLI3 chr7 42116350 - CROT chr7 86975655 + Exonic hg19 LUSC TCGA-77-7465 2 CDS-5'UTR Intra-chr p14.1 Transcription factor q21.12 Seq+ 8055 ChimerSeq FusionScan TCGA_RNA-Seq PACSIN2-A4GALT PACSIN2 chr22 43411026 - A4GALT chr22 43091637 - Exonic hg19 LUSC TCGA-18-5595 2 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 8056 ChimerSeq FusionScan TCGA_RNA-Seq TCF7L2-CASC2 TCF7L2 chr10 114799885 + CASC2 chr10 119966033 + Exonic hg19 LUSC TCGA-22-5491 2 CDS-5'UTR Intra-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q26.11 Tumor suppressor gene Seq+ 8057 ChimerSeq FusionScan TCGA_RNA-Seq ESYT2-DNAJB6 ESYT2 chr7 158621779 - DNAJB6 chr7 157151240 + Exonic hg19 LUSC TCGA-22-5491 2 CDS-5'UTR Intra-chr q36.3 q36.3 8058 ChimerSeq FusionScan TCGA_RNA-Seq NRIP1-LINC00478 NRIP1 chr21 16415815 - LINC00478 chr21 17966659 + Exonic hg19 LUSC TCGA-34-5236 7 5'UTR-5'UTR Intra-chr q21.1 Seq+ 8059 ChimerSeq FusionScan TCGA_RNA-Seq NRIP1-LINC00478 NRIP1 chr21 16415815 - LINC00478 chr21 17979313 + Exonic hg19 LUSC TCGA-34-5236 5 5'UTR-5'UTR Intra-chr q21.1 Seq+ 8060 ChimerSeq FusionScan TCGA_RNA-Seq HHAT-PPPDE1 HHAT chr1 210637999 + PPPDE1 chr1 244868857 + Exonic hg19 LUSC TCGA-34-5236 2 Out-of-Frame Intra-chr Seq+ 8061 ChimerSeq FusionScan TCGA_RNA-Seq PANX1-CCDC67 PANX1 chr11 93862659 + CCDC67 chr11 93170708 + Exonic hg19 LUSC TCGA-34-5236 2 Out-of-Frame Intra-chr q21 Tumor suppressor gene Seq+ 8062 ChimerSeq FusionScan TCGA_RNA-Seq ERGIC1-RANBP17 ERGIC1 chr5 172341841 + RANBP17 chr5 170720886 + Exonic hg19 LUSC TCGA-33-6737 14 In-Frame Intra-chr q35.1 q35.1 Seq+ 8063 ChimerSeq FusionScan TCGA_RNA-Seq ALDH3A1-MYH9 ALDH3A1 chr17 19651571 - MYH9 chr22 36723533 - Exonic hg19 LUSC TCGA-33-6737 8 5'UTR-CDS Inter-chr p11.2 q12.3 Oncogene Tumor suppressor gene Seq+ 8064 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57697534 + VMP1 chr17 57842331 + Exonic hg19 LUSC TCGA-33-6737 4 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 8065 ChimerSeq FusionScan TCGA_RNA-Seq NKAIN2-MS4A12 NKAIN2 chr6 124979532 + MS4A12 chr11 60264785 + Exonic hg19 LUSC TCGA-33-6737 3 CDS-5'UTR Inter-chr q22.31 q12.2 Seq+ 8066 ChimerSeq FusionScan TCGA_RNA-Seq CLASRP-MYH14 CLASRP chr19 45543569 + MYH14 chr19 50792692 + Exonic hg19 LUSC TCGA-33-6737 2 In-Frame Intra-chr q13.32 q13.33 8067 ChimerSeq FusionScan TCGA_RNA-Seq RPS12-MRPL3 RPS12 chr6 133135752 + MRPL3 chr3 131190123 - Exonic hg19 LUSC TCGA-18-3421 2 5'UTR-CDS Inter-chr q23.2 q22.1 8068 ChimerSeq FusionScan TCGA_RNA-Seq RPL24-SLC9A9 RPL24 chr3 101401272 - SLC9A9 chr3 143214290 - Exonic hg19 LUSC TCGA-18-3421 2 In-Frame Intra-chr q12.3 q24 Seq+ 8069 ChimerSeq FusionScan TCGA_RNA-Seq FXR1-MCCC1 FXR1 chr3 180630524 + MCCC1 chr3 182790275 - Exonic hg19 LUSC TCGA-85-8580 9 In-Frame Intra-chr q26.33 q27.1 Seq+ 8070 ChimerSeq FusionScan TCGA_RNA-Seq CLIP2-MYH9 CLIP2 chr7 73774608 + MYH9 chr22 36681999 - Exonic hg19 LUSC TCGA-77-8156 2 Out-of-Frame Inter-chr q11.23 q12.3 Oncogene Tumor suppressor gene 8071 ChimerSeq FusionScan TCGA_RNA-Seq TECR-PKN1 TECR chr19 14640523 + PKN1 chr19 14574478 + Exonic hg19 LUSC TCGA-43-7658 6 In-Frame Intra-chr p13.12 p13.12 AGC:PKN Seq+ 8072 ChimerSeq FusionScan TCGA_RNA-Seq SRCAP-IL11RA SRCAP chr16 30725032 + IL11RA chr9 34655214 + Exonic hg19 LUSC TCGA-43-7658 3 CDS-5'UTR Inter-chr p11.2 Transcription factor p13.3 Seq+ 8073 ChimerSeq FusionScan TCGA_RNA-Seq ART3-SLC25A13 ART3 chr4 76997111 + SLC25A13 chr7 95776008 - Exonic hg19 LUSC TCGA-43-7658 3 In-Frame Inter-chr q21.1 q21.3 Seq+ 8074 ChimerSeq FusionScan TCGA_RNA-Seq ART3-SLC25A13 ART3 chr4 77003688 + SLC25A13 chr7 95776008 - Exonic hg19 LUSC TCGA-43-7658 3 Out-of-Frame Inter-chr q21.1 q21.3 Seq+ 8075 ChimerSeq FusionScan TCGA_RNA-Seq STRBP-DENND1A STRBP chr9 126030714 - DENND1A chr9 126165769 - Exonic hg19 LUSC TCGA-43-7658 2 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 8076 ChimerSeq FusionScan TCGA_RNA-Seq STRBP-DENND1A STRBP chr9 125999108 - DENND1A chr9 126165769 - Exonic hg19 LUSC TCGA-43-7658 2 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 8077 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LUSC TCGA-43-7658 2 Out-of-Frame Intra-chr q22.2 q22.2 8078 ChimerSeq FusionScan TCGA_RNA-Seq SGMS2-HADH SGMS2 chr4 108779709 + HADH chr4 108930914 + Exonic hg19 LUSC TCGA-NC-A5HN 2 5'UTR-CDS Intra-chr q25 q25 Seq+ 8079 ChimerSeq FusionScan TCGA_RNA-Seq BCAS3-MARCH10 BCAS3 chr17 59024713 + 2019_ 3_ 10_ chr17 60837367 - Exonic hg19 LUSC TCGA-63-7023 4 In-Frame Intra-chr q23.2 q23.2 Seq+ 8080 ChimerSeq FusionScan TCGA_RNA-Seq AGAP3-RELN AGAP3 chr7 150784159 + RELN chr7 103191743 - Exonic hg19 LUSC TCGA-68-8250 3 Out-of-Frame Intra-chr q36.1 q22.1 Seq+ 8081 ChimerSeq FusionScan TCGA_RNA-Seq RELN-CHRM2 RELN chr7 103191513 - CHRM2 chr7 136635749 + Exonic hg19 LUSC TCGA-68-8250 2 CDS-5'UTR Intra-chr q22.1 q33 Seq+ 8082 ChimerSeq FusionScan TCGA_RNA-Seq PRKRIP1-ORAI3 PRKRIP1 chr7 102045130 + ORAI3 chr16 30964505 + Exonic hg19 LUSC TCGA-66-2767 2 Out-of-Frame Inter-chr q22.1 p11.2 8083 ChimerSeq FusionScan TCGA_RNA-Seq RPS27L-SPPL2A RPS27L chr15 63448611 - SPPL2A chr15 51028399 - Exonic hg19 LUSC TCGA-66-2767 2 Out-of-Frame Intra-chr q22.2 q21.2 8084 ChimerSeq FusionScan TCGA_RNA-Seq RABEP1-RPAIN RABEP1 chr17 5212117 + RPAIN chr17 5324615 + Exonic hg19 LUSC TCGA-60-2711 2 Out-of-Frame Intra-chr p13.2 p13.2 Seq+ 8085 ChimerSeq FusionScan TCGA_RNA-Seq C18orf1-PRDM2 C18orf1 chr18 13438383 + PRDM2 chr1 14142921 + Exonic hg19 LUSC TCGA-22-1005 2 In-Frame Inter-chr p36.21 Tumor suppressor gene Transcription factor 8086 ChimerSeq FusionScan TCGA_RNA-Seq LIPA-PIK3AP1 LIPA chr10 91011493 - PIK3AP1 chr10 98469740 - Exonic hg19 LUSC TCGA-60-2698 2 5'UTR-CDS Intra-chr q23.31 q24.1 8087 ChimerSeq FusionScan TCGA_RNA-Seq NXN-GLOD4 NXN chr17 729200 - GLOD4 chr17 679159 - Exonic hg19 LUSC TCGA-60-2714 2 Out-of-Frame Intra-chr p13.3 p13.3 8088 ChimerSeq FusionScan TCGA_RNA-Seq CDC42BPB-ZFYVE1 CDC42BPB chr14 103452823 - ZFYVE1 chr14 73465023 - Exonic hg19 LUSC TCGA-NC-A5HI 3 In-Frame Intra-chr q32.32 q24.2 Seq+ 8089 ChimerSeq FusionScan TCGA_RNA-Seq BRAP-FAM216A BRAP chr12 112103442 - FAM216A chr12 110927823 + Exonic hg19 LUSC TCGA-18-4083 4 Out-of-Frame Intra-chr q24.12 q24.11 Seq+ 8090 ChimerSeq FusionScan TCGA_RNA-Seq BRAP-FAM216A BRAP chr12 112110464 - FAM216A chr12 110927823 + Exonic hg19 LUSC TCGA-18-4083 2 Out-of-Frame Intra-chr q24.12 q24.11 Seq+ 8091 ChimerSeq FusionScan TCGA_RNA-Seq GPN3-LINC00478 GPN3 chr12 110905960 - LINC00478 chr21 17763933 + Exonic hg19 LUSC TCGA-18-4083 2 CDS-5'UTR Inter-chr q24.11 Seq+ 8092 ChimerSeq FusionScan TCGA_RNA-Seq KIRREL-CD1A KIRREL chr1 157963518 + CD1A chr1 158224873 + Exonic hg19 LUSC TCGA-85-7710 3 In-Frame Intra-chr q23.1 q23.1 Seq+ 8093 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA4-PHF14 NDUFA4 chr7 10979642 - PHF14 chr7 11150976 + Exonic hg19 LUSC TCGA-85-7697 2 CDS-5'UTR Intra-chr p21.3 p21.3 Seq+ 8094 ChimerSeq FusionScan TCGA_RNA-Seq MAPK1-SSU72 MAPK1 chr22 22221611 - SSU72 chr1 1480382 - Exonic hg19 LUSC TCGA-85-7697 2 In-Frame Inter-chr q11.22 Oncogene p36.33 Seq+ 8095 ChimerSeq FusionScan TCGA_RNA-Seq GCN1L1-CCND2 GCN1L1 chr12 120600873 - CCND2 chr12 4398007 + Exonic hg19 LUSC TCGA-22-1017 2 In-Frame Intra-chr p13.32 Oncogene Seq+ 8096 ChimerSeq FusionScan TCGA_RNA-Seq C14orf101-MLIP C14orf101 chr14 57052630 + MLIP chr6 53986244 + Exonic hg19 LUSC TCGA-22-1017 2 Out-of-Frame Inter-chr p12.1 Seq+ 8097 ChimerSeq FusionScan TCGA_RNA-Seq SMURF2-PLEKHM1 SMURF2 chr17 62657946 - PLEKHM1 chr17 43559891 - Exonic hg19 LUSC TCGA-22-1017 2 CDS-5'UTR Intra-chr q24.1 8098 ChimerSeq FusionScan TCGA_RNA-Seq NFX1-TMEM8B NFX1 chr9 33354890 + TMEM8B chr9 35845971 + Exonic hg19 LUSC TCGA-22-4604 3 Out-of-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 8099 ChimerSeq FusionScan TCGA_RNA-Seq VEZF1-DDX42 VEZF1 chr17 56065439 - DDX42 chr17 61864393 + Exonic hg19 LUSC TCGA-66-2783 6 CDS-5'UTR Intra-chr q22 Transcription factor q23.3 Seq+ 8100 ChimerSeq FusionScan TCGA_RNA-Seq SYNGR2-MSI2 SYNGR2 chr17 76167135 + MSI2 chr17 55478739 + Exonic hg19 LUSC TCGA-66-2783 5 Out-of-Frame Intra-chr q25.3 q22 Seq+ 8101 ChimerSeq FusionScan TCGA_RNA-Seq MSI2-ICAM2 MSI2 chr17 55704664 + ICAM2 chr17 62081324 - Exonic hg19 LUSC TCGA-66-2783 4 In-Frame Intra-chr q22 q23.3 Seq+ 8102 ChimerSeq FusionScan TCGA_RNA-Seq BTRC-FBXW4 BTRC chr10 103113985 + FBXW4 chr10 103384567 - Exonic hg19 LUSC TCGA-66-2783 2 Out-of-Frame Intra-chr q24.32 q24.32 8103 ChimerSeq FusionScan TCGA_RNA-Seq CSNK1D-SCPEP1 CSNK1D chr17 80231181 - SCPEP1 chr17 55072867 + Exonic hg19 LUSC TCGA-66-2783 2 Out-of-Frame Intra-chr q25.3 q22 Seq+ 8104 ChimerSeq FusionScan TCGA_RNA-Seq MGRN1-C16orf96 MGRN1 chr16 4675049 + C16orf96 chr16 4621561 + Exonic hg19 LUSC TCGA-77-8140 3 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 8105 ChimerSeq FusionScan TCGA_RNA-Seq IPO7-WEE1 IPO7 chr11 9406394 + WEE1 chr11 9597434 + Exonic hg19 LUSC TCGA-22-4593 5 In-Frame Intra-chr p15.4 p15.4 Seq+ 8106 ChimerSeq FusionScan TCGA_RNA-Seq NCK1-IL20RB NCK1 chr3 136647069 + IL20RB chr3 136728954 + Exonic hg19 LUSC TCGA-63-A5MH 2 Out-of-Frame Intra-chr q22.3 q22.3 Seq+ 8107 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0247-FARP1 KIAA0247 chr14 70125430 + FARP1 chr13 99036983 + Exonic hg19 LUSC TCGA-56-8626 2 In-Frame Inter-chr q32.2 8108 ChimerSeq FusionScan TCGA_RNA-Seq RPS19-CEACAM5 RPS19 chr19 42365281 + CEACAM5 chr19 42224841 + Exonic hg19 LUSC TCGA-58-8387 8 In-Frame Intra-chr q13.2 q13.2 Seq+ 8109 ChimerSeq FusionScan TCGA_RNA-Seq RPS19-CEACAM5 RPS19 chr19 42365281 + CEACAM5 chr19 42231153 + Exonic hg19 LUSC TCGA-58-8387 7 In-Frame Intra-chr q13.2 q13.2 Seq+ 8110 ChimerSeq FusionScan TCGA_RNA-Seq NRBF2-REEP3 NRBF2 chr10 64893260 + REEP3 chr10 65369946 + Exonic hg19 LUSC TCGA-58-8387 2 In-Frame Intra-chr q21.3 q21.3 Seq+ 8111 ChimerSeq FusionScan TCGA_RNA-Seq TCF20-CYP2D6 TCF20 chr22 42605656 - CYP2D6 chr22 42524946 - Exonic hg19 LUSC TCGA-58-8387 2 Out-of-Frame Intra-chr Transcription factor Oncogene Seq+ 8112 ChimerSeq FusionScan TCGA_RNA-Seq PPFIA1-RBFOX2 PPFIA1 chr11 70118542 + RBFOX2 chr22 36164396 - Exonic hg19 LUSC TCGA-85-A4QQ 4 In-Frame Inter-chr q13.3 Seq+ 8113 ChimerSeq FusionScan TCGA_RNA-Seq UBE2D2-ARHGAP26 UBE2D2 chr5 138994551 + ARHGAP26 chr5 142434003 + Exonic hg19 LUSC TCGA-85-A4QQ 2 In-Frame Intra-chr q31.2 q31.3 Seq+ 8114 ChimerSeq FusionScan TCGA_RNA-Seq U2AF2-NLRP9 U2AF2 chr19 56181058 + NLRP9 chr19 56220410 - Exonic hg19 LUSC TCGA-33-4547 8 Out-of-Frame Intra-chr q13.42 q13.42 Seq+ 8115 ChimerSeq FusionScan TCGA_RNA-Seq FOSL2-BRE FOSL2 chr2 28627225 + BRE chr2 28561316 + Exonic hg19 LUSC TCGA-66-2771 5 Out-of-Frame Intra-chr p23.2 Transcription factor Seq+ 8116 ChimerSeq FusionScan TCGA_RNA-Seq RNF19A-ANKRD46 RNF19A chr8 101322094 - ANKRD46 chr8 101545539 - Exonic hg19 LUSC TCGA-66-2771 4 5'UTR-5'UTR Intra-chr q22.2 q22.3 Seq+ 8117 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPC-SUPT16H HNRNPC chr14 21698477 - SUPT16H chr14 21831308 - Exonic hg19 LUSC TCGA-66-2771 3 Out-of-Frame Intra-chr q11.2 q11.2 Seq+ 8118 ChimerSeq FusionScan TCGA_RNA-Seq EFNA3-FLAD1 EFNA3 chr1 155051545 + FLAD1 chr1 154965188 + Exonic hg19 LUSC TCGA-66-2771 3 Out-of-Frame Intra-chr q21.3 q21.3 Seq+ 8119 ChimerSeq FusionScan TCGA_RNA-Seq ZZZ3-UGP2 ZZZ3 chr1 78148269 - UGP2 chr2 64109599 + Exonic hg19 LUSC TCGA-66-2771 2 5'UTR-CDS Inter-chr p31.1 Transcription factor p15 8120 ChimerSeq FusionScan TCGA_RNA-Seq PRRC2C-FMO1 PRRC2C chr1 171454874 + FMO1 chr1 171236681 + Exonic hg19 LUSC TCGA-96-8169 5 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 8121 ChimerSeq FusionScan TCGA_RNA-Seq MAPKAP1-PSMB7 MAPKAP1 chr9 128305337 - PSMB7 chr9 127119194 - Exonic hg19 LUSC TCGA-33-4589 2 Out-of-Frame Intra-chr q33.3 q33.3 8122 ChimerSeq FusionScan TCGA_RNA-Seq TFRC-CPA3 TFRC chr3 195787050 - CPA3 chr3 148614306 + Exonic hg19 LUSC TCGA-22-5474 3 Out-of-Frame Intra-chr q29 q24 Seq+ 8123 ChimerSeq FusionScan TCGA_RNA-Seq TMBIM4-CNOT2 TMBIM4 chr12 66563634 - CNOT2 chr12 70671911 + Exonic hg19 LUSC TCGA-22-5474 2 CDS-5'UTR Intra-chr q14.3 q15 8124 ChimerSeq FusionScan TCGA_RNA-Seq DTX2-PEX5 DTX2 chr7 76093026 + PEX5 chr12 7342957 + Exonic hg19 LUSC TCGA-22-5474 2 5'UTR-5'UTR Inter-chr p13.31 8125 ChimerSeq FusionScan TCGA_RNA-Seq UBQLN1-TTLL4 UBQLN1 chr9 86279944 - TTLL4 chr2 219613558 + Exonic hg19 LUSC TCGA-56-8309 2 In-Frame Inter-chr q21.32 q35 8126 ChimerSeq FusionScan TCGA_RNA-Seq KIF13A-F13A1 KIF13A chr6 17987284 - F13A1 chr6 6197559 - Exonic hg19 LUSC TCGA-37-A5EM 8 In-Frame Intra-chr p22.3 p25.1 Seq+ 8127 ChimerSeq FusionScan TCGA_RNA-Seq TFDP1-CUL4A TFDP1 chr13 114265377 + CUL4A chr13 113873258 + Exonic hg19 LUSC TCGA-56-8622 2 Out-of-Frame Intra-chr q34 Transcription factor q34 Seq+ 8128 ChimerSeq FusionScan TCGA_RNA-Seq PHC3-FNDC3B PHC3 chr3 169863210 - FNDC3B chr3 172114953 + Exonic hg19 LUSC TCGA-56-1622 3 In-Frame Intra-chr q26.2 Tumor suppressor gene q26.31 Seq+ 8129 ChimerSeq FusionScan TCGA_RNA-Seq LAMA5-C20orf151 LAMA5 chr20 60905543 - C20orf151 chr20 60994786 - Exonic hg19 LUSC TCGA-O2-A52N 9 CDS-5'UTR Intra-chr q13.33 Seq+ 8130 ChimerSeq FusionScan TCGA_RNA-Seq LSM1-WHSC1L1 LSM1 chr8 38033792 - WHSC1L1 chr8 38196125 - Exonic hg19 LUSC TCGA-33-6738 3 Out-of-Frame Intra-chr p11.23 p11.23 Tumor suppressor gene Seq+ 8131 ChimerSeq FusionScan TCGA_RNA-Seq ERGIC1-RANBP17 ERGIC1 chr5 172341841 + RANBP17 chr5 170720886 + Exonic hg19 LUSC TCGA-33-6738 2 In-Frame Intra-chr q35.1 q35.1 Seq+ 8132 ChimerSeq FusionScan TCGA_RNA-Seq ACIN1-HAUS4 ACIN1 chr14 23547359 - HAUS4 chr14 23424385 - Exonic hg19 LUSC TCGA-18-4721 2 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 8133 ChimerSeq FusionScan TCGA_RNA-Seq ITFG2-TULP3 ITFG2 chr12 2922022 + TULP3 chr12 3046796 + Exonic hg19 LUSC TCGA-18-4721 2 In-Frame Intra-chr p13.33 p13.33 Seq+ 8134 ChimerSeq FusionScan TCGA_RNA-Seq ABHD12-ENTPD6 ABHD12 chr20 25371148 - ENTPD6 chr20 25203473 + Exonic hg19 LUSC TCGA-85-7696 3 Out-of-Frame Intra-chr p11.21 p11.21 Seq+ 8135 ChimerSeq FusionScan TCGA_RNA-Seq EIF3D-MYH9 EIF3D chr22 36925122 - MYH9 chr22 36682892 - Exonic hg19 LUSC TCGA-85-7696 3 5'UTR-CDS Intra-chr q12.3 q12.3 Oncogene Tumor suppressor gene Seq+ 8136 ChimerSeq FusionScan TCGA_RNA-Seq CSNK1A1-NOMO2 CSNK1A1 chr5 148889441 - NOMO2 chr16 18511366 - Exonic hg19 LUSC TCGA-85-7696 2 Out-of-Frame Inter-chr q32 Tumor suppressor gene p12.3 8137 ChimerSeq FusionScan TCGA_RNA-Seq SELT-RNF13 SELT chr3 150321286 + RNF13 chr3 149638920 + Exonic hg19 LUSC TCGA-58-A46L 2 Out-of-Frame Intra-chr q25.1 8138 ChimerSeq FusionScan TCGA_RNA-Seq MED23-RNF217 MED23 chr6 131908848 - RNF217 chr6 125366356 + Exonic hg19 LUSC TCGA-NC-A5HH 3 In-Frame Intra-chr q23.2 q22.31 Seq+ 8139 ChimerSeq FusionScan TCGA_RNA-Seq EIF4B-MTCP1NB EIF4B chr12 53416411 + MTCP1NB chrX 154292308 - Exonic hg19 LUSC TCGA-NC-A5HH 2 CDS-5'UTR Inter-chr q13.13 8140 ChimerSeq FusionScan TCGA_RNA-Seq DHX40-TUBD1 DHX40 chr17 57665414 + TUBD1 chr17 57963591 - Exonic hg19 LUSC TCGA-56-8201 2 In-Frame Intra-chr q23.1 q23.1 Seq+ 8141 ChimerSeq FusionScan TCGA_RNA-Seq SDC4-PCIF1 SDC4 chr20 43976964 - PCIF1 chr20 44575711 + Exonic hg19 LUSC TCGA-34-5929 2 Out-of-Frame Intra-chr q13.12 q13.12 8142 ChimerSeq FusionScan TCGA_RNA-Seq TM9SF4-HM13 TM9SF4 chr20 30747914 + HM13 chr20 30154012 + Exonic hg19 LUSC TCGA-66-2789 3 In-Frame Intra-chr q11.21 q11.21 Seq+ 8143 ChimerSeq FusionScan TCGA_RNA-Seq RAB30-PRCP RAB30 chr11 82782732 - PRCP chr11 82571159 - Exonic hg19 LUSC TCGA-66-2789 2 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 8144 ChimerSeq FusionScan TCGA_RNA-Seq CDKN2A-SRGAP2 CDKN2A chr9 21974676 - SRGAP2 chr1 206634381 + Exonic hg19 LUSC TCGA-60-2715 6 In-Frame Inter-chr p21.3 Oncogene Tumor suppressor gene q32.1 Tumor suppressor gene Seq+ 8145 ChimerSeq FusionScan TCGA_RNA-Seq FOXN2-SPTBN1 FOXN2 chr2 48573890 + SPTBN1 chr2 54849436 + Exonic hg19 LUSC TCGA-60-2715 3 In-Frame Intra-chr p16.3 Transcription factor p16.2 Tumor suppressor gene Seq+ 8146 ChimerSeq FusionScan TCGA_RNA-Seq FBXL20-GRB7 FBXL20 chr17 37557613 - GRB7 chr17 37898504 + Exonic hg19 LUSC TCGA-60-2715 2 Out-of-Frame Intra-chr q12 q12 Seq+ 8147 ChimerSeq FusionScan TCGA_RNA-Seq STX12-WDTC1 STX12 chr1 28146243 + WDTC1 chr1 27608729 + Exonic hg19 LUSC TCGA-85-8287 2 In-Frame Intra-chr p35.3 p36.11 Seq+ 8148 ChimerSeq FusionScan TCGA_RNA-Seq ATP10D-GABRA2 ATP10D chr4 47527659 + GABRA2 chr4 46252621 - Exonic hg19 LUSC TCGA-O2-A52V 2 Out-of-Frame Intra-chr p12 p12 Seq+ 8149 ChimerSeq FusionScan TCGA_RNA-Seq SS18L1-GPR108 SS18L1 chr20 60718945 + GPR108 chr19 6736722 - Exonic hg19 LUSC TCGA-O2-A52V 2 In-Frame Inter-chr q13.33 p13.3 8150 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57728677 + VMP1 chr17 57915655 + Exonic hg19 LUSC TCGA-O2-A52V 2 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 8151 ChimerSeq FusionScan TCGA_RNA-Seq RELT-PAAF1 RELT chr11 73103513 + PAAF1 chr11 73620443 + Exonic hg19 LUSC TCGA-85-7950 3 In-Frame Intra-chr q13.4 q13.4 Seq+ 8152 ChimerSeq FusionScan TCGA_RNA-Seq RNF121-PPP6R3 RNF121 chr11 71640170 + PPP6R3 chr11 68334481 + Exonic hg19 LUSC TCGA-85-A511 2 In-Frame Intra-chr q13.4 q13.2 Seq+ 8153 ChimerSeq FusionScan TCGA_RNA-Seq TRIP12-KIF1A TRIP12 chr2 230786595 - KIF1A chr2 241737229 - Exonic hg19 LUSC TCGA-46-6026 3 5'UTR-5'UTR Intra-chr q36.3 q37.3 Seq+ 8154 ChimerSeq FusionScan TCGA_RNA-Seq PREP-SIM1 PREP chr6 105736632 - SIM1 chr6 100868834 - Exonic hg19 LUSC TCGA-46-6026 3 In-Frame Intra-chr q21 q16.3 Transcription factor Seq+ 8155 ChimerSeq FusionScan TCGA_RNA-Seq YWHAG-HDLBP YWHAG chr7 75988038 - HDLBP chr2 242207956 - Exonic hg19 LUSC TCGA-46-6026 2 CDS-5'UTR Inter-chr q11.23 q37.3 8156 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175388437 - Exonic hg19 LUSC TCGA-46-6026 2 5'UTR-CDS Inter-chr q21.1 q35.2 8157 ChimerSeq FusionScan TCGA_RNA-Seq PNRC2-BSDC1 PNRC2 chr1 24287624 + BSDC1 chr1 32842342 - Exonic hg19 LUSC TCGA-60-2721 4 5'UTR-CDS Intra-chr p36.11 p35.1 Seq+ 8158 ChimerSeq FusionScan TCGA_RNA-Seq BOC-SIDT1 BOC chr3 112997630 + SIDT1 chr3 113320434 + Exonic hg19 LUSC TCGA-63-A5MW 3 In-Frame Intra-chr q13.2 q13.2 Seq+ 8159 ChimerSeq FusionScan TCGA_RNA-Seq ANXA2-RPL10 ANXA2 chr15 60690141 - RPL10 chrX 153626837 + Exonic hg19 LUSC TCGA-33-4566 2 5'UTR-5'UTR Inter-chr q22.2 q28 Tumor suppressor gene Seq+ 8160 ChimerSeq FusionScan TCGA_RNA-Seq GPNMB-KLHL7 GPNMB chr7 23313233 + KLHL7 chr7 23163395 + Exonic hg19 LUSC TCGA-34-2596 2 Out-of-Frame Intra-chr p15.3 p15.3 Seq+ 8161 ChimerSeq FusionScan TCGA_RNA-Seq DLEU2-CPT1A DLEU2 chr13 50642232 - CPT1A chr11 68560870 - Exonic hg19 LUSC TCGA-34-2596 2 3'UTR-CDS Inter-chr q14.2 Tumor suppressor gene q13.3 8162 ChimerSeq FusionScan TCGA_RNA-Seq GPI-COG4 GPI chr19 34859607 + COG4 chr16 70553634 - Exonic hg19 LUSC TCGA-34-2596 2 In-Frame Inter-chr q22.1 8163 ChimerSeq FusionScan TCGA_RNA-Seq SLC25A45-RELA SLC25A45 chr11 65149385 - RELA chr11 65427686 - Exonic hg19 LUSC TCGA-NC-A5HP 2 Out-of-Frame Intra-chr q13.1 q13.1 Transcription factor 8164 ChimerSeq FusionScan TCGA_RNA-Seq PACS1-CHKA PACS1 chr11 65838313 + CHKA chr11 67821514 - Exonic hg19 LUSC TCGA-85-8276 3 Out-of-Frame Intra-chr q13.1 q13.2 Seq+ 8165 ChimerSeq FusionScan TCGA_RNA-Seq AHNAK-DPF2 AHNAK chr11 62259203 - DPF2 chr11 65116320 + Exonic hg19 LUSC TCGA-85-8276 3 Out-of-Frame Intra-chr q12.3 Tumor suppressor gene q13.1 Seq+ 8166 ChimerSeq FusionScan TCGA_RNA-Seq ABCA5-C17orf67 ABCA5 chr17 67280093 - C17orf67 chr17 54872541 - Exonic hg19 LUSC TCGA-6A-AB49 2 Out-of-Frame Intra-chr q24.3 q22 Seq+ 8167 ChimerSeq FusionScan TCGA_RNA-Seq DKFZp686K1684-ELP4 DKFZp686K1684 chr11 31838187 + ELP4 chr11 31653763 + Exonic hg19 LUSC TCGA-21-5787 2 5'UTR-CDS Intra-chr p13 8168 ChimerSeq FusionScan TCGA_RNA-Seq DPY19L1-CDKAL1 DPY19L1 chr7 35029495 - CDKAL1 chr6 21198251 + Exonic hg19 LUSC TCGA-21-5787 2 In-Frame Inter-chr p14.2 p22.3 Seq+ 8169 ChimerSeq FusionScan TCGA_RNA-Seq DRG1-MYO18B DRG1 chr22 31799190 + MYO18B chr22 26317223 + Exonic hg19 LUSC TCGA-33-4532 3 In-Frame Intra-chr q12.2 Tumor suppressor gene q12.1 Tumor suppressor gene Seq+ 8170 ChimerSeq FusionScan TCGA_RNA-Seq GALNT7-SAP30 GALNT7 chr4 174090112 + SAP30 chr4 174294540 + Exonic hg19 LUSC TCGA-21-5783 4 In-Frame Intra-chr q34.1 q34.1 Seq+ 8171 ChimerSeq FusionScan TCGA_RNA-Seq NFE2L2-HNRNPA3 NFE2L2 chr2 178128130 - HNRNPA3 chr2 178080266 + Exonic hg19 LUSC TCGA-34-7107 2 5'UTR-CDS Intra-chr q31.2 Oncogene Transcription factor q31.2 8172 ChimerSeq FusionScan TCGA_RNA-Seq SAMD12-RTN1 SAMD12 chr8 119634042 - RTN1 chr14 60074210 - Exonic hg19 LUSC TCGA-22-4594 5 In-Frame Inter-chr q24.12 q23.1 Seq+ 8173 ChimerSeq FusionScan TCGA_RNA-Seq ZNF146-IL13RA1 ZNF146 chr19 36709097 + IL13RA1 chrX 117925724 + Exonic hg19 LUSC TCGA-98-A53A 2 5'UTR-CDS Inter-chr q13.12 Transcription factor q24 8174 ChimerSeq FusionScan TCGA_RNA-Seq FAM104A-CDC42EP4 FAM104A chr17 71228224 - CDC42EP4 chr17 71282751 - Exonic hg19 LUSC TCGA-98-A53A 2 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 8175 ChimerSeq FusionScan TCGA_RNA-Seq TXNRD1-LAMTOR3 TXNRD1 chr12 104707095 + LAMTOR3 chr4 100803224 - Exonic hg19 LUSC TCGA-98-A53A 2 In-Frame Inter-chr q23.3 q23 Seq+ 8176 ChimerSeq FusionScan TCGA_RNA-Seq SENP2-VPS8 SENP2 chr3 185307957 + VPS8 chr3 184742123 + Exonic hg19 LUSC TCGA-56-8628 6 Out-of-Frame Intra-chr q27.2 q27.2 Seq+ 8177 ChimerSeq FusionScan TCGA_RNA-Seq AP2M1-MAP3K13 AP2M1 chr3 183898772 + MAP3K13 chr3 185146284 + Exonic hg19 LUSC TCGA-56-8628 2 CDS-5'UTR Intra-chr q27.1 q27.2 Seq+ 8178 ChimerSeq FusionScan TCGA_RNA-Seq SENP2-VPS8 SENP2 chr3 185304302 + VPS8 chr3 184742123 + Exonic hg19 LUSC TCGA-56-8628 2 Out-of-Frame Intra-chr q27.2 q27.2 Seq+ 8179 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHA1-BTBD16 PLEKHA1 chr10 124159904 + BTBD16 chr10 124043365 + Exonic hg19 LUSC TCGA-33-AASJ 4 Out-of-Frame Intra-chr q26.13 q26.13 Seq+ 8180 ChimerSeq FusionScan TCGA_RNA-Seq DCTN2-DDX23 DCTN2 chr12 57939810 - DDX23 chr12 49230049 - Exonic hg19 LUSC TCGA-85-6175 11 In-Frame Intra-chr q13.3 q13.12 Seq+ 8181 ChimerSeq FusionScan TCGA_RNA-Seq LOH12CR1-PTPRR LOH12CR1 chr12 12514283 + PTPRR chr12 71095103 - Exonic hg19 LUSC TCGA-85-6175 2 Out-of-Frame Intra-chr q15 Seq+ 8182 ChimerSeq FusionScan TCGA_RNA-Seq SLC25A36-PEX5L SLC25A36 chr3 140660937 + PEX5L chr3 179533792 - Exonic hg19 LUSC TCGA-85-6175 2 Out-of-Frame Intra-chr q23 q26.33 Seq+ 8183 ChimerSeq FusionScan TCGA_RNA-Seq PRKDC-PRIM2 PRKDC chr8 48824969 - PRIM2 chr6 57244698 + Exonic hg19 LUSC TCGA-33-4582 2 In-Frame Inter-chr q11.21 Oncogene p11.2 Seq+ 8184 ChimerSeq FusionScan TCGA_RNA-Seq STK38-PXT1 STK38 chr6 36483114 - PXT1 chr6 36359651 - Exonic hg19 LUSC TCGA-33-4582 2 In-Frame Intra-chr p21.31 p21.31 Seq+ 8185 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-TMCC1 PTPN12 chr7 77256992 + TMCC1 chr3 129390107 - Exonic hg19 LUSC TCGA-33-4582 2 Out-of-Frame Inter-chr q11.23 Tumor suppressor gene q22.1 8186 ChimerSeq FusionScan TCGA_RNA-Seq EGFR-SEC61G EGFR chr7 55087058 + SEC61G chr7 54825287 - Exonic hg19 LUSC TCGA-85-8351 6 CDS-5'UTR Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 8187 ChimerSeq FusionScan TCGA_RNA-Seq CAMTA1-DHRS3 CAMTA1 chr1 6845635 + DHRS3 chr1 12640694 - Exonic hg19 LUSC TCGA-46-3769 5 In-Frame Intra-chr p36.31 Tumor suppressor gene Transcription factor p36.21 Seq+ 8188 ChimerSeq FusionScan TCGA_RNA-Seq THAP3-CAMTA1 THAP3 chr1 6685352 + CAMTA1 chr1 6880240 + Exonic hg19 LUSC TCGA-46-3769 4 Out-of-Frame Intra-chr p36.31 Transcription factor p36.31 Tumor suppressor gene Transcription factor Seq+ 8189 ChimerSeq FusionScan TCGA_RNA-Seq FOXP4-CCND3 FOXP4 chr6 41545819 + CCND3 chr6 41905132 - Exonic hg19 LUSC TCGA-46-3769 3 In-Frame Intra-chr p21.1 Oncogene Transcription factor p21.1 Seq+ 8190 ChimerSeq FusionScan TCGA_RNA-Seq FOXP4-CCND3 FOXP4 chr6 41545819 + CCND3 chr6 41908323 - Exonic hg19 LUSC TCGA-46-3769 2 In-Frame Intra-chr p21.1 Oncogene Transcription factor p21.1 Seq+ 8191 ChimerSeq FusionScan TCGA_RNA-Seq FOXP4-CCND3 FOXP4 chr6 41552629 + CCND3 chr6 41905132 - Exonic hg19 LUSC TCGA-46-3769 2 In-Frame Intra-chr p21.1 Oncogene Transcription factor p21.1 Seq+ 8192 ChimerSeq FusionScan TCGA_RNA-Seq LRRC1-TINAG LRRC1 chr6 53707025 + TINAG chr6 54208023 + Exonic hg19 LUSC TCGA-46-3769 2 Out-of-Frame Intra-chr p12.1 p12.1 Seq+ 8193 ChimerSeq FusionScan TCGA_RNA-Seq FNDC3B-NAALADL2 FNDC3B chr3 171757561 + NAALADL2 chr3 174814579 + Exonic hg19 LUSC TCGA-21-1077 2 5'UTR-CDS Intra-chr q26.31 q26.31 Seq+ 8194 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-REEP3 RCC1 chr1 28832596 + REEP3 chr10 65326097 + Exonic hg19 LUSC TCGA-21-1077 2 5'UTR-CDS Inter-chr p35.3 q21.3 8195 ChimerSeq FusionScan TCGA_RNA-Seq ECT2-KALRN ECT2 chr3 172491812 + KALRN chr3 124065989 + Exonic hg19 LUSC TCGA-60-2710 2 In-Frame Intra-chr q26.31 Tumor suppressor gene q21.1 Seq+ 8196 ChimerSeq FusionScan TCGA_RNA-Seq UBAP2L-EEFSEC UBAP2L chr1 154214041 + EEFSEC chr3 128126911 + Exonic hg19 LUSC TCGA-37-4130 5 Out-of-Frame Inter-chr q21.3 q21.3 Seq+ 8197 ChimerSeq FusionScan TCGA_RNA-Seq FN1-PECR FN1 chr2 216242897 - PECR chr2 216931241 - Exonic hg19 LUSC TCGA-37-4130 3 In-Frame Intra-chr q35 Oncogene q35 Seq+ 8198 ChimerSeq FusionScan TCGA_RNA-Seq EML4-TTC27 EML4 chr2 42396776 + TTC27 chr2 33007692 + Exonic hg19 LUSC TCGA-37-4130 2 Out-of-Frame Intra-chr p21 Oncogene p22.3 8199 ChimerSeq FusionScan TCGA_RNA-Seq ANO1-FGF19 ANO1 chr11 70026162 + FGF19 chr11 69518132 - Exonic hg19 LUSC TCGA-85-7699 3 Out-of-Frame Intra-chr q13.3 q13.3 Seq+ 8200 ChimerSeq FusionScan TCGA_RNA-Seq OTUD7B-CTSS OTUD7B chr1 149949360 - CTSS chr1 150705621 - Exonic hg19 LUSC TCGA-68-7755 4 Out-of-Frame Intra-chr q21.2 q21.3 Seq+ 8201 ChimerSeq FusionScan TCGA_RNA-Seq NETO2-TMEM184B NETO2 chr16 47177489 - TMEM184B chr22 38644025 - Exonic hg19 LUSC TCGA-22-5472 2 CDS-5'UTR Inter-chr q12.1 q13.1 8202 ChimerSeq FusionScan TCGA_RNA-Seq ADAM10-ATP13A3 ADAM10 chr15 58904006 - ATP13A3 chr3 194126845 - Exonic hg19 LUSC TCGA-39-5024 2 3'UTR-CDS Inter-chr q21.3 q29 8203 ChimerSeq FusionScan TCGA_RNA-Seq PIP5K1A-SCNM1 PIP5K1A chr1 151171557 + SCNM1 chr1 151139409 + Exonic hg19 LUSC TCGA-39-5024 2 Out-of-Frame Intra-chr q21.3 q21.3 Seq+ 8204 ChimerSeq FusionScan TCGA_RNA-Seq GXYLT1-TMEM117 GXYLT1 chr12 42523560 - TMEM117 chr12 44537327 + Exonic hg19 LUSC TCGA-18-3408 2 In-Frame Intra-chr q12 q12 8205 ChimerSeq FusionScan TCGA_RNA-Seq RBL2-TBC1D19 RBL2 chr16 53488754 + TBC1D19 chr4 26744129 + Exonic hg19 LUSC TCGA-18-3408 2 In-Frame Inter-chr q12.2 Tumor suppressor gene p15.2 8206 ChimerSeq FusionScan TCGA_RNA-Seq RAB25-PMF1 RAB25 chr1 156031234 + PMF1 chr1 156202110 + Exonic hg19 LUSC TCGA-39-5037 6 Out-of-Frame Intra-chr q22 Tumor suppressor gene q22 Seq+ 8207 ChimerSeq FusionScan TCGA_RNA-Seq GBAS-PSPH GBAS chr7 56032394 + PSPH chr7 56082864 - Exonic hg19 LUSC TCGA-21-A5DI 9 Out-of-Frame Intra-chr p11.2 Seq+ 8208 ChimerSeq FusionScan TCGA_RNA-Seq PIK3CB-BFSP2 PIK3CB chr3 138452202 - BFSP2 chr3 133185671 + Exonic hg19 LUSC TCGA-66-2756 7 In-Frame Intra-chr q22.3 Oncogene q22.1 Seq+ 8209 ChimerSeq FusionScan TCGA_RNA-Seq RTN4-MITD1 RTN4 chr2 55276880 - MITD1 chr2 99790479 - Exonic hg19 LUSC TCGA-66-2756 4 In-Frame Intra-chr p16.1 Tumor suppressor gene q11.2 Seq+ 8210 ChimerSeq FusionScan TCGA_RNA-Seq PAK2-ECE2 PAK2 chr3 196467028 + ECE2 chr3 183975260 + Exonic hg19 LUSC TCGA-66-2756 3 5'UTR-CDS Intra-chr q29 STE:STE20 q27.1 Seq+ 8211 ChimerSeq FusionScan TCGA_RNA-Seq UBR1-TGM5 UBR1 chr15 43276094 - TGM5 chr15 43528035 - Exonic hg19 LUSC TCGA-66-2756 3 In-Frame Intra-chr q15.2 q15.2 Seq+ 8212 ChimerSeq FusionScan TCGA_RNA-Seq TMCO7-CLEC2L TMCO7 chr16 69074324 + CLEC2L chr7 139221019 + Exonic hg19 LUSC TCGA-66-2756 2 Out-of-Frame Inter-chr q34 8213 ChimerSeq FusionScan TCGA_RNA-Seq CCP110-GOLPH3L CCP110 chr16 19539344 + GOLPH3L chr1 150621224 - Exonic hg19 LUSC TCGA-66-2756 2 Out-of-Frame Inter-chr p12.3 q21.3 Seq+ 8214 ChimerSeq FusionScan TCGA_RNA-Seq MTIF3-GNAI3 MTIF3 chr13 28019224 - GNAI3 chr1 110116358 + Exonic hg19 LUSC TCGA-22-5481 2 5'UTR-CDS Inter-chr q12.2 p13.3 8215 ChimerSeq FusionScan TCGA_RNA-Seq ATP11A-CUL4A ATP11A chr13 113344769 + CUL4A chr13 113907395 + Exonic hg19 LUSC TCGA-21-1081 7 In-Frame Intra-chr q34 q34 Seq+ 8216 ChimerSeq FusionScan TCGA_RNA-Seq SOLH-WHSC1L1 SOLH chr16 583998 + WHSC1L1 chr8 38205733 - Exonic hg19 LUSC TCGA-21-1081 7 5'UTR-5'UTR Inter-chr p11.23 Tumor suppressor gene Seq+ 8217 ChimerSeq FusionScan TCGA_RNA-Seq PI4KA-RREB1 PI4KA chr22 21188849 - RREB1 chr6 7211036 + Exonic hg19 LUSC TCGA-21-1081 5 Out-of-Frame Inter-chr q11.21 p24.3 Transcription factor Seq+ 8218 ChimerSeq FusionScan TCGA_RNA-Seq C19orf48-ACPT C19orf48 chr19 51302550 - ACPT chr19 51297144 + Exonic hg19 LUSC TCGA-21-1081 2 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 8219 ChimerSeq FusionScan TCGA_RNA-Seq C19orf48-ACPT C19orf48 chr19 51305473 - ACPT chr19 51297144 + Exonic hg19 LUSC TCGA-21-1081 2 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 8220 ChimerSeq FusionScan TCGA_RNA-Seq SLC22A23-TRAF3 SLC22A23 chr6 3410421 - TRAF3 chr14 103336521 + Exonic hg19 LUSC TCGA-21-1081 2 CDS-5'UTR Inter-chr p25.2 q32.32 Seq+ 8221 ChimerSeq FusionScan TCGA_RNA-Seq USP48-MAN1C1 USP48 chr1 22109316 - MAN1C1 chr1 26110153 + Exonic hg19 LUSC TCGA-85-8070 8 In-Frame Intra-chr p36.12 p36.11 Seq+ 8222 ChimerSeq FusionScan TCGA_RNA-Seq USP48-SEPN1 USP48 chr1 22109316 - SEPN1 chr1 26127533 + Exonic hg19 LUSC TCGA-85-8070 3 Out-of-Frame Intra-chr p36.12 Seq+ 8223 ChimerSeq FusionScan TCGA_RNA-Seq USP48-SEPN1 USP48 chr1 22109316 - SEPN1 chr1 26131632 + Exonic hg19 LUSC TCGA-85-8070 2 Out-of-Frame Intra-chr p36.12 Seq+ 8224 ChimerSeq FusionScan TCGA_RNA-Seq FGFR2-KIAA1967 FGFR2 chr10 123243211 - KIAA1967 chr8 22464119 + Exonic hg19 LUSC TCGA-66-2765 3 In-Frame Inter-chr q26.13 TK:FGFR Oncogene Tumor suppressor gene Seq+ 8225 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1967-FGFR2 KIAA1967 chr8 22462355 + FGFR2 chr10 123239535 - Exonic hg19 LUSC TCGA-66-2765 2 5'UTR-CDS Inter-chr Tumor suppressor gene q26.13 TK:FGFR Oncogene Seq+ 8226 ChimerSeq FusionScan TCGA_RNA-Seq CREBBP-PRSS33 CREBBP chr16 3929832 - PRSS33 chr16 2836122 - Exonic hg19 LUSC TCGA-33-4587 5 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 8227 ChimerSeq FusionScan TCGA_RNA-Seq CREBBP-TCEB2 CREBBP chr16 3929832 - TCEB2 chr16 2827128 - Exonic hg19 LUSC TCGA-33-4587 2 Out-of-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene Seq+ 8228 ChimerSeq FusionScan TCGA_RNA-Seq CDKAL1-ASH1L CDKAL1 chr6 20846409 + ASH1L chr1 155349907 - Exonic hg19 LUSC TCGA-33-4587 2 In-Frame Inter-chr p22.3 q22 Transcription factor Seq+ 8229 ChimerSeq FusionScan TCGA_RNA-Seq TNS3-ZNF736 TNS3 chr7 47384352 - ZNF736 chr7 63796636 + Exonic hg19 LUSC TCGA-77-8143 3 Out-of-Frame Intra-chr p12.3 q11.21 Transcription factor 8230 ChimerSeq FusionScan TCGA_RNA-Seq PDE4D-DEPDC1B PDE4D chr5 59783768 - DEPDC1B chr5 59943360 - Exonic hg19 LUSC TCGA-77-8143 2 5'UTR-CDS Intra-chr q12.1 q12.1 Seq+ 8231 ChimerSeq FusionScan TCGA_RNA-Seq MCCC1-FXR1 MCCC1 chr3 182788786 - FXR1 chr3 180679255 + Exonic hg19 LUSC TCGA-56-7223 3 Out-of-Frame Intra-chr q27.1 q26.33 Seq+ 8232 ChimerSeq FusionScan TCGA_RNA-Seq KLHL24-MCF2L2 KLHL24 chr3 183361330 + MCF2L2 chr3 182948805 - Exonic hg19 LUSC TCGA-56-7223 2 5'UTR-CDS Intra-chr q27.1 q27.1 Seq+ 8233 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R2-CLDN1 PPP1R2 chr3 195256594 - CLDN1 chr3 190030825 - Exonic hg19 LUSC TCGA-56-7223 2 Out-of-Frame Intra-chr q29 q28 Tumor suppressor gene Seq+ 8234 ChimerSeq FusionScan TCGA_RNA-Seq ATP11B-NIT2 ATP11B chr3 182566345 + NIT2 chr3 100071247 + Exonic hg19 LUSC TCGA-60-2726 2 In-Frame Intra-chr q26.33 Oncogene q12.2 Tumor suppressor gene 8235 ChimerSeq FusionScan TCGA_RNA-Seq PTRH2-RNFT1 PTRH2 chr17 57784731 - RNFT1 chr17 58035805 - Exonic hg19 LUSC TCGA-33-4586 5 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 8236 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57746301 + VMP1 chr17 57886156 + Exonic hg19 LUSC TCGA-66-2781 5 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 8237 ChimerSeq FusionScan TCGA_RNA-Seq ALDH18A1-PDLIM1 ALDH18A1 chr10 97416353 - PDLIM1 chr10 97031541 - Exonic hg19 LUSC TCGA-66-2781 4 5'UTR-CDS Intra-chr q24.1 q23.33 Seq+ 8238 ChimerSeq FusionScan TCGA_RNA-Seq CDK13-C7orf10 CDK13 chr7 40118450 + C7orf10 chr7 40789032 + Exonic hg19 LUSC TCGA-66-2781 4 Out-of-Frame Intra-chr p14.1 Seq+ 8239 ChimerSeq FusionScan TCGA_RNA-Seq LSM14A-GPI LSM14A chr19 34712643 + GPI chr19 34887205 + Exonic hg19 LUSC TCGA-66-2781 3 In-Frame Intra-chr Seq+ 8240 ChimerSeq FusionScan TCGA_RNA-Seq FOXK2-TBCD FOXK2 chr17 80478183 + TBCD chr17 80772715 + Exonic hg19 LUSC TCGA-66-2781 3 In-Frame Intra-chr q25.3 Transcription factor Seq+ 8241 ChimerSeq FusionScan TCGA_RNA-Seq CDK13-C7orf10 CDK13 chr7 40118450 + C7orf10 chr7 40723654 + Exonic hg19 LUSC TCGA-66-2781 2 Out-of-Frame Intra-chr p14.1 Seq+ 8242 ChimerSeq FusionScan TCGA_RNA-Seq FOXK2-TBCD FOXK2 chr17 80478183 + TBCD chr17 80842020 + Exonic hg19 LUSC TCGA-66-2781 2 In-Frame Intra-chr q25.3 Transcription factor Seq+ 8243 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57763169 + VMP1 chr17 57895072 + Exonic hg19 LUSC TCGA-66-2781 2 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 8244 ChimerSeq FusionScan TCGA_RNA-Seq SPPL3-ACADS SPPL3 chr12 121341647 - ACADS chr12 121164828 + Exonic hg19 LUSC TCGA-85-8479 8 Out-of-Frame Intra-chr q24.31 q24.31 Seq+ 8245 ChimerSeq FusionScan TCGA_RNA-Seq UBQLN4-MEF2D UBQLN4 chr1 156023384 - MEF2D chr1 156453222 - Exonic hg19 LUSC TCGA-85-8479 2 CDS-5'UTR Intra-chr q22 q22 Transcription factor Seq+ 8246 ChimerSeq FusionScan TCGA_RNA-Seq EPAS1-CRIPT EPAS1 chr2 46525076 + CRIPT chr2 46845911 + Exonic hg19 LUSC TCGA-NC-A5HG 2 Out-of-Frame Intra-chr p21 Tumor suppressor gene Transcription factor p21 Seq+ 8247 ChimerSeq FusionScan TCGA_RNA-Seq MON2-WBSCR16 MON2 chr12 62895478 + WBSCR16 chr7 74471723 - Exonic hg19 LUSC TCGA-85-A513 3 In-Frame Inter-chr q14.1 Seq+ 8248 ChimerSeq FusionScan TCGA_RNA-Seq MYSM1-DAB1 MYSM1 chr1 59150824 - DAB1 chr1 57611102 - Exonic hg19 LUSC TCGA-85-A513 2 Out-of-Frame Intra-chr p32.1 Transcription factor p32.1 Seq+ 8249 ChimerSeq FusionScan TCGA_RNA-Seq ROBO2-ERLIN2 ROBO2 chr3 77147491 + ERLIN2 chr8 37602088 + Exonic hg19 LUSC TCGA-56-6546 3 In-Frame Inter-chr p12.3 p11.23 Seq+ 8250 ChimerSeq FusionScan TCGA_RNA-Seq MAT2B-RARS MAT2B chr5 162939202 + RARS chr5 167927595 + Exonic hg19 LUSC TCGA-56-6546 2 In-Frame Intra-chr q34 q34 8251 ChimerSeq FusionScan TCGA_RNA-Seq TPD52-RALYL TPD52 chr8 81083659 - RALYL chr8 85785518 + Exonic hg19 LUSC TCGA-77-8009 4 In-Frame Intra-chr q21.13 q21.2 Seq+ 8252 ChimerSeq FusionScan TCGA_RNA-Seq PTGES3-UBE2K PTGES3 chr12 57081781 - UBE2K chr4 39776453 + Exonic hg19 LUSC TCGA-77-8009 2 In-Frame Inter-chr q13.3 p14 8253 ChimerSeq FusionScan TCGA_RNA-Seq TPCN2-TMEM179B TPCN2 chr11 68816574 + TMEM179B chr11 62556494 + Exonic hg19 LUSC TCGA-77-8009 2 Out-of-Frame Intra-chr q13.3 q12.3 Seq+ 8254 ChimerSeq FusionScan TCGA_RNA-Seq C10orf76-MGEA5 C10orf76 chr10 103716353 - MGEA5 chr10 103563776 - Exonic hg19 LUSC TCGA-77-8009 2 In-Frame Intra-chr q24.32 q24.32 Seq+ 8255 ChimerSeq FusionScan TCGA_RNA-Seq EGLN2-PLD3 EGLN2 chr19 41307320 + PLD3 chr19 40877579 + Exonic hg19 LUSC TCGA-66-2759 2 In-Frame Intra-chr q13.2 q13.2 Seq+ 8256 ChimerSeq FusionScan TCGA_RNA-Seq SYMPK-ZNF573 SYMPK chr19 46330767 - ZNF573 chr19 38231095 - Exonic hg19 LUSC TCGA-66-2759 2 Out-of-Frame Intra-chr q13.32 q13.13 Transcription factor Seq+ 8257 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-UBE2D3 RPL22 chr1 6252989 - UBE2D3 chr4 103747793 - Exonic hg19 LUSC TCGA-60-2703 2 CDS-5'UTR Inter-chr p36.31 q24 8258 ChimerSeq FusionScan TCGA_RNA-Seq BMP2K-CDS1 BMP2K chr4 79697875 + CDS1 chr4 85552971 + Exonic hg19 LUSC TCGA-NC-A5HT 3 In-Frame Intra-chr q21.21 q21.23 Tumor suppressor gene Seq+ 8259 ChimerSeq FusionScan TCGA_RNA-Seq GMPS-C3orf55 GMPS chr3 155588686 + C3orf55 chr3 157271018 + Exonic hg19 LUSC TCGA-66-2766 10 CDS-5'UTR Intra-chr q25.31 Seq+ 8260 ChimerSeq FusionScan TCGA_RNA-Seq STK3-SULT1A3 STK3 chr8 99718694 - SULT1A3 chr16 29474665 + Exonic hg19 LUSC TCGA-66-2766 4 In-Frame Inter-chr q22.2 p11.2 Seq+ 8261 ChimerSeq FusionScan TCGA_RNA-Seq RRP12-EXOSC1 RRP12 chr10 99160061 - EXOSC1 chr10 99197507 - Exonic hg19 LUSC TCGA-66-2766 4 In-Frame Intra-chr q24.1 q24.1 Seq+ 8262 ChimerSeq FusionScan TCGA_RNA-Seq C9orf3-WDR53 C9orf3 chr9 97767898 + WDR53 chr3 196281678 - Exonic hg19 LUSC TCGA-77-8145 4 In-Frame Inter-chr q22.32 q29 Seq+ 8263 ChimerSeq FusionScan TCGA_RNA-Seq C9orf3-WDR53 C9orf3 chr9 97767898 + WDR53 chr3 196288362 - Exonic hg19 LUSC TCGA-77-8145 2 CDS-5'UTR Inter-chr q22.32 q29 Seq+ 8264 ChimerSeq FusionScan TCGA_RNA-Seq NAGLU-SH3GL1 NAGLU chr17 40693224 + SH3GL1 chr19 4364218 - Exonic hg19 LUSC TCGA-21-1072 2 In-Frame Inter-chr q21.2 p13.3 8265 ChimerSeq FusionScan TCGA_RNA-Seq PTDSS2-MNT PTDSS2 chr11 479152 + MNT chr17 2298748 - Exonic hg19 LUSC TCGA-21-1072 2 Out-of-Frame Inter-chr p13.3 Tumor suppressor gene Transcription factor 8266 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-CREBZF CPSF6 chr12 69656342 + CREBZF chr11 85371641 - Exonic hg19 LUSC TCGA-46-3768 2 3'UTR-3'UTR Inter-chr q15 q14.1 Transcription factor 8267 ChimerSeq FusionScan TCGA_RNA-Seq YEATS2-ATP11B YEATS2 chr3 183495488 + ATP11B chr3 182590143 + Exonic hg19 LUSC TCGA-56-A4BY 9 In-Frame Intra-chr q27.1 q26.33 Oncogene Seq+ 8268 ChimerSeq FusionScan TCGA_RNA-Seq FBXW7-TMEM154 FBXW7 chr4 153456092 - TMEM154 chr4 153574079 - Exonic hg19 LUSC TCGA-56-A4BY 2 5'UTR-CDS Intra-chr q31.3 Oncogene Tumor suppressor gene q31.3 Seq+ 8269 ChimerSeq FusionScan TCGA_RNA-Seq CYB561-AMZ2 CYB561 chr17 61523605 - AMZ2 chr17 66252954 + Exonic hg19 LUSC TCGA-77-7140 7 5'UTR-CDS Intra-chr q23.3 q24.2 8270 ChimerSeq FusionScan TCGA_RNA-Seq BMPR1A-PTEN BMPR1A chr10 88516676 + PTEN chr10 89711874 + Exonic hg19 LUSC TCGA-77-7140 4 5'UTR-CDS Intra-chr q23.2 TKL:STKR Oncogene Tumor suppressor gene q23.31 Oncogene Tumor suppressor gene 8271 ChimerSeq FusionScan TCGA_RNA-Seq PARD3-NSUN6 PARD3 chr10 34558584 - NSUN6 chr10 18905222 - Exonic hg19 LUSC TCGA-77-7140 4 In-Frame Intra-chr p11.21 p12.31 Seq+ 8272 ChimerSeq FusionScan TCGA_RNA-Seq ADNP-PCIF1 ADNP chr20 49545187 - PCIF1 chr20 44569691 + Exonic hg19 LUSC TCGA-77-7140 3 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.12 Seq+ 8273 ChimerSeq FusionScan TCGA_RNA-Seq ADNP-PCIF1 ADNP chr20 49545187 - PCIF1 chr20 44571735 + Exonic hg19 LUSC TCGA-77-7140 3 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.12 Seq+ 8274 ChimerSeq FusionScan TCGA_RNA-Seq TMEM131-BAGE5 TMEM131 chr2 98504514 - BAGE5 chr21 11058324 - Exonic hg19 LUSC TCGA-77-7140 2 CDS-3'UTR Inter-chr q11.2 8275 ChimerSeq FusionScan TCGA_RNA-Seq CSTA-CASR CSTA chr3 122056495 + CASR chr3 121994658 + Exonic hg19 LUSC TCGA-92-8065 3 In-Frame Intra-chr q21.1 q13.33 Seq+ 8276 ChimerSeq FusionScan TCGA_RNA-Seq MATN2-C8orf47 MATN2 chr8 99033555 + C8orf47 chr8 99101303 + Exonic hg19 LUSC TCGA-63-7021 3 In-Frame Intra-chr q22.1 8277 ChimerSeq FusionScan TCGA_RNA-Seq CELF1-PTPMT1 CELF1 chr11 47574543 - PTPMT1 chr11 47587457 + Exonic hg19 LUSC TCGA-63-A5MT 3 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 8278 ChimerSeq FusionScan TCGA_RNA-Seq C12orf5-PRR4 C12orf5 chr12 4440483 + PRR4 chr12 11001006 - Exonic hg19 LUSC TCGA-77-A5GB 4 In-Frame Intra-chr Seq+ 8279 ChimerSeq FusionScan TCGA_RNA-Seq C12orf5-PRR4 C12orf5 chr12 4446326 + PRR4 chr12 11001006 - Exonic hg19 LUSC TCGA-77-A5GB 2 Out-of-Frame Intra-chr Seq+ 8280 ChimerSeq FusionScan TCGA_RNA-Seq NRIP1-YLPM1 NRIP1 chr21 16415815 - YLPM1 chr14 75290958 + Exonic hg19 LUSC TCGA-21-1079 2 5'UTR-CDS Inter-chr q21.1 q24.3 8281 ChimerSeq FusionScan TCGA_RNA-Seq ANXA2-RORA ANXA2 chr15 60674540 - RORA chr15 60824050 - Exonic hg19 LUSC TCGA-58-8393 3 In-Frame Intra-chr q22.2 q22.2 Transcription factor Seq+ 8282 ChimerSeq FusionScan TCGA_RNA-Seq UBE3D-ME1 UBE3D chr6 83667030 - ME1 chr6 83963457 - Exonic hg19 LUSC TCGA-21-1075 2 Out-of-Frame Intra-chr q14.1 q14.2 8283 ChimerSeq FusionScan TCGA_RNA-Seq PJA2-GPR98 PJA2 chr5 108745542 - GPR98 chr5 90445846 + Exonic hg19 LUSC TCGA-56-6545 9 5'UTR-5'UTR Intra-chr q21.3 Seq+ 8284 ChimerSeq FusionScan TCGA_RNA-Seq PJA2-GPR98 PJA2 chr5 108745542 - GPR98 chr5 90449037 + Exonic hg19 LUSC TCGA-56-6545 7 5'UTR-5'UTR Intra-chr q21.3 Seq+ 8285 ChimerSeq FusionScan TCGA_RNA-Seq TANK-MNAT1 TANK chr2 162036272 + MNAT1 chr14 61434946 + Exonic hg19 LUSC TCGA-56-6545 4 Out-of-Frame Inter-chr q24.2 Tumor suppressor gene q23.1 Seq+ 8286 ChimerSeq FusionScan TCGA_RNA-Seq TANK-SLC38A6 TANK chr2 162036272 + SLC38A6 chr14 61449225 + Exonic hg19 LUSC TCGA-56-6545 2 In-Frame Inter-chr q24.2 Tumor suppressor gene q23.1 Seq+ 8287 ChimerSeq FusionScan TCGA_RNA-Seq RBM6-IDH2 RBM6 chr3 49977658 + IDH2 chr15 90634876 - Exonic hg19 LUSC TCGA-85-A53L 4 5'UTR-CDS Inter-chr p21.31 Tumor suppressor gene q26.1 Oncogene Seq+ 8288 ChimerSeq FusionScan TCGA_RNA-Seq ELL-LDLRAD1 ELL chr19 18572387 - LDLRAD1 chr1 54476083 - Exonic hg19 LUSC TCGA-85-A53L 2 Out-of-Frame Inter-chr p13.11 p32.3 Seq+ 8289 ChimerSeq FusionScan TCGA_RNA-Seq SACS-MIPEP SACS chr13 23985358 - MIPEP chr13 24415627 - Exonic hg19 LUSC TCGA-46-3767 2 In-Frame Intra-chr q12.12 q12.12 Seq+ 8290 ChimerSeq FusionScan TCGA_RNA-Seq RBPMS-GTF2E2 RBPMS chr8 30242674 + GTF2E2 chr8 30437913 - Exonic hg19 LUSC TCGA-85-A4JC 2 Out-of-Frame Intra-chr p12 p12 8291 ChimerSeq FusionScan TCGA_RNA-Seq DCBLD2-ABI3BP DCBLD2 chr3 98619965 - ABI3BP chr3 100499053 - Exonic hg19 LUSC TCGA-92-7341 3 In-Frame Intra-chr q12.1 q12.2 Seq+ 8292 ChimerSeq FusionScan TCGA_RNA-Seq BAIAP2L1-ANKIB1 BAIAP2L1 chr7 98030113 - ANKIB1 chr7 91924202 + Exonic hg19 LUSC TCGA-56-A4BW 2 CDS-5'UTR Intra-chr q22.1 q21.2 Seq+ 8293 ChimerSeq FusionScan TCGA_RNA-Seq TPM2-TMEM176B TPM2 chr9 35685060 - TMEM176B chr7 150488711 - Exonic hg19 LUSC TCGA-51-4079 2 In-Frame Inter-chr p13.3 q36.1 8294 ChimerSeq FusionScan TCGA_RNA-Seq HIPK3-GYLTL1B HIPK3 chr11 33279435 + GYLTL1B chr11 45947772 + Exonic hg19 LUSC TCGA-43-6771 9 5'UTR-CDS Intra-chr p13 CMGC:DYRK Seq+ 8295 ChimerSeq FusionScan TCGA_RNA-Seq PPFIA1-ALDH3B1 PPFIA1 chr11 70189998 + ALDH3B1 chr11 67795216 + Exonic hg19 LUSC TCGA-43-6771 6 In-Frame Intra-chr q13.3 q13.2 Seq+ 8296 ChimerSeq FusionScan TCGA_RNA-Seq PPP6R3-ARHGAP1 PPP6R3 chr11 68228295 + ARHGAP1 chr11 46717706 - Exonic hg19 LUSC TCGA-43-6771 5 5'UTR-5'UTR Intra-chr q13.2 p11.2 Seq+ 8297 ChimerSeq FusionScan TCGA_RNA-Seq MRPL21-FAM168A MRPL21 chr11 68660870 - FAM168A chr11 73118688 - Exonic hg19 LUSC TCGA-43-6771 4 Out-of-Frame Intra-chr q13.3 q13.4 Seq+ 8298 ChimerSeq FusionScan TCGA_RNA-Seq CELF1-MTCH2 CELF1 chr11 47494639 - MTCH2 chr11 47660603 - Exonic hg19 LUSC TCGA-43-6771 4 Out-of-Frame Intra-chr p11.2 p11.2 Seq+ 8299 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-ERAP1 RCC1 chr1 28832596 + ERAP1 chr5 96139646 - Exonic hg19 LUSC TCGA-43-6771 2 5'UTR-5'UTR Inter-chr p35.3 q15 8300 ChimerSeq FusionScan TCGA_RNA-Seq CLN6-RPL4 CLN6 chr15 68510873 - RPL4 chr15 66791990 - Exonic hg19 LUSC TCGA-21-1070 2 In-Frame Intra-chr q23 q22.31 8301 ChimerSeq FusionScan TCGA_RNA-Seq SLC2A10-ACSS2 SLC2A10 chr20 45338379 + ACSS2 chr20 33500898 + Exonic hg19 LUSC TCGA-85-8664 3 Out-of-Frame Intra-chr q13.12 q11.22 Seq+ 8302 ChimerSeq FusionScan TCGA_RNA-Seq TMEM65-EXT1 TMEM65 chr8 125384094 - EXT1 chr8 118849440 - Exonic hg19 LUSC TCGA-85-8664 2 Out-of-Frame Intra-chr q24.13 q24.11 Oncogene Tumor suppressor gene Seq+ 8303 ChimerSeq FusionScan TCGA_RNA-Seq USP9X-NXF2B USP9X chrX 40945362 + NXF2B chrX 101561987 + Exonic hg19 LUSC TCGA-63-A5MV 2 5'UTR-5'UTR Intra-chr p11.4 Oncogene q22.1 8304 ChimerSeq FusionScan TCGA_RNA-Seq BTAF1-MARCH5 BTAF1 chr10 93683847 + 2019_ 3_ 5_ chr10 94070891 + Exonic hg19 LUSC TCGA-85-8071 2 In-Frame Intra-chr q23.32 q23.32 Seq+ 8305 ChimerSeq FusionScan TCGA_RNA-Seq MCFD2-TTC7A MCFD2 chr2 47142861 - TTC7A chr2 47177501 + Exonic hg19 LUSC TCGA-96-7545 6 5'UTR-CDS Intra-chr p21 p21 Seq+ 8306 ChimerSeq FusionScan TCGA_RNA-Seq SKIL-FNDC3B SKIL chr3 170079217 + FNDC3B chr3 172064116 + Exonic hg19 LUSC TCGA-56-7580 4 In-Frame Intra-chr q26.2 Tumor suppressor gene Transcription factor q26.31 Seq+ 8307 ChimerSeq FusionScan TCGA_RNA-Seq SKIL-FNDC3B SKIL chr3 170079217 + FNDC3B chr3 172065001 + Exonic hg19 LUSC TCGA-56-7580 4 In-Frame Intra-chr q26.2 Tumor suppressor gene Transcription factor q26.31 Seq+ 8308 ChimerSeq FusionScan TCGA_RNA-Seq LYST-AFF1 LYST chr1 236030142 - AFF1 chr4 88005271 + Exonic hg19 LUSC TCGA-22-1012 2 5'UTR-CDS Inter-chr q42.3 q21.3 Oncogene 8309 ChimerSeq FusionScan TCGA_RNA-Seq TYMS-YES1 TYMS chr18 662320 + YES1 chr18 732965 - Exonic hg19 LUSC TCGA-85-8353 5 3'UTR-CDS Intra-chr p11.32 p11.32 Seq+ 8310 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB40-TCEA3 ZBTB40 chr1 22778497 + TCEA3 chr1 23724448 - Exonic hg19 LUSC TCGA-63-6202 2 5'UTR-CDS Intra-chr p36.12 Transcription factor Seq+ 8311 ChimerSeq FusionScan TCGA_RNA-Seq OSBPL2-GNAI3 OSBPL2 chr20 60813653 + GNAI3 chr1 110116358 + Exonic hg19 LUSC TCGA-60-2707 2 5'UTR-CDS Inter-chr q13.33 p13.3 8312 ChimerSeq FusionScan TCGA_RNA-Seq FKBP1A-ACSL1 FKBP1A chr20 1356134 - ACSL1 chr4 185689604 - Exonic hg19 LUSC TCGA-51-4081 2 In-Frame Inter-chr p13 q35.1 8313 ChimerSeq FusionScan TCGA_RNA-Seq TMTC1-STRAP TMTC1 chr12 29904598 - STRAP chr12 16042861 + Exonic hg19 LUSC TCGA-51-4081 2 In-Frame Intra-chr p11.22 p12.3 8314 ChimerSeq FusionScan TCGA_RNA-Seq PAK1-LNP1 PAK1 chr11 77184596 - LNP1 chr3 100148540 + Exonic hg19 LUSC TCGA-56-A4BX 3 5'UTR-5'UTR Inter-chr q14.1 STE:STE20 q12.2 Seq+ 8315 ChimerSeq FusionScan TCGA_RNA-Seq VPS8-NLGN1 VPS8 chr3 184742177 + NLGN1 chr3 173322068 + Exonic hg19 LUSC TCGA-56-A4BX 2 CDS-5'UTR Intra-chr q27.2 q26.31 Seq+ 8316 ChimerSeq FusionScan TCGA_RNA-Seq TAF8-SLC22A16 TAF8 chr6 42023752 + SLC22A16 chr6 110763978 - Exonic hg19 LUSC TCGA-43-A475 2 Out-of-Frame Intra-chr p21.1 q21 Seq+ 8317 ChimerSeq FusionScan TCGA_RNA-Seq NSF-LRRC37B NSF chr17 44782220 + LRRC37B chr17 30351729 + Exonic hg19 LUSC TCGA-66-2734 2 Out-of-Frame Intra-chr q11.2 8318 ChimerSeq FusionScan TCGA_RNA-Seq NUB1-ABCB8 NUB1 chr7 151042552 + ABCB8 chr7 150742295 + Exonic hg19 LUSC TCGA-66-2800 5 In-Frame Intra-chr q36.1 q36.1 Seq+ 8319 ChimerSeq FusionScan TCGA_RNA-Seq ARID1B-ENPP4 ARID1B chr6 157406039 + ENPP4 chr6 46107287 + Exonic hg19 LUSC TCGA-66-2800 3 CDS-5'UTR Intra-chr q25.3 Oncogene p21.1 Seq+ 8320 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 LUSC TCGA-66-2800 2 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 8321 ChimerSeq FusionScan TCGA_RNA-Seq RAC1-TTC7A RAC1 chr7 6431672 + TTC7A chr2 47300840 + Exonic hg19 LUSC TCGA-66-2800 2 In-Frame Inter-chr p22.1 Oncogene p21 8322 ChimerSeq FusionScan TCGA_RNA-Seq C1QL1-SLC16A5 C1QL1 chr17 43044819 - SLC16A5 chr17 73094132 + Exonic hg19 LUSC TCGA-66-2800 2 Out-of-Frame Intra-chr q21.31 q25.1 Seq+ 8323 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1432-EPYC KIAA1432 chr9 5690038 + EPYC chr12 91372039 - Exonic hg19 LUSC TCGA-96-7544 4 Out-of-Frame Inter-chr q21.33 Seq+ 8324 ChimerSeq FusionScan TCGA_RNA-Seq FNBP4-PVRL1 FNBP4 chr11 47786821 - PVRL1 chr11 119548567 - Exonic hg19 LUSC TCGA-96-7544 3 In-Frame Intra-chr p11.2 Seq+ 8325 ChimerSeq FusionScan TCGA_RNA-Seq C10orf47-CELF2 C10orf47 chr10 11865469 + CELF2 chr10 11259387 + Exonic hg19 LUSC TCGA-96-7544 2 5'UTR-CDS Intra-chr p14 8326 ChimerSeq FusionScan TCGA_RNA-Seq FARSB-PHLDB2 FARSB chr2 223493555 - PHLDB2 chr3 111671418 + Exonic hg19 LUSC TCGA-96-7544 2 In-Frame Inter-chr q36.1 q13.2 8327 ChimerSeq FusionScan TCGA_RNA-Seq BLCAP-ZMYM2 BLCAP chr20 36156194 - ZMYM2 chr13 20534097 + Exonic hg19 LUSC TCGA-66-2778 2 5'UTR-5'UTR Inter-chr q11.23 Tumor suppressor gene q12.11 8328 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175388437 - Exonic hg19 LUSC TCGA-37-4141 2 5'UTR-CDS Inter-chr q21.1 q35.2 8329 ChimerSeq FusionScan TCGA_RNA-Seq ZNF8-SSBP4 ZNF8 chr19 58790513 + SSBP4 chr19 18538160 + Exonic hg19 LUSC TCGA-22-5478 7 Out-of-Frame Intra-chr q13.43 Transcription factor p13.11 Seq+ 8330 ChimerSeq FusionScan TCGA_RNA-Seq GATAD2A-RPL28 GATAD2A chr19 19496947 + RPL28 chr19 55897717 + Exonic hg19 LUSC TCGA-22-5478 2 5'UTR-5'UTR Intra-chr p13.11 Transcription factor q13.42 Seq+ 8331 ChimerSeq FusionScan TCGA_RNA-Seq CLOCK-SRD5A3 CLOCK chr4 56308598 - SRD5A3 chr4 56225512 + Exonic hg19 LUSC TCGA-22-5478 2 In-Frame Intra-chr q12 Transcription factor q12 Seq+ 8332 ChimerSeq FusionScan TCGA_RNA-Seq VOPP1-HS3ST2 VOPP1 chr7 55559974 - HS3ST2 chr16 22926264 + Exonic hg19 LUSC TCGA-85-7843 4 Out-of-Frame Inter-chr p11.2 p12.2 Seq+ 8333 ChimerSeq FusionScan TCGA_RNA-Seq RASSF7-DEAF1 RASSF7 chr11 561033 + DEAF1 chr11 654051 - Exonic hg19 LUSC TCGA-85-7843 3 5'UTR-CDS Intra-chr p15.5 Transcription factor Seq+ 8334 ChimerSeq FusionScan TCGA_RNA-Seq SHB-PAX5 SHB chr9 38016007 - PAX5 chr9 37020798 - Exonic hg19 LUSC TCGA-22-4609 2 In-Frame Intra-chr p13.1 p13.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 8335 ChimerSeq FusionScan TCGA_RNA-Seq AGK-FAM133B AGK chr7 141255367 + FAM133B chr7 92210917 - Exonic hg19 LUSC TCGA-77-7335 2 Out-of-Frame Intra-chr q21.2 8336 ChimerSeq FusionScan TCGA_RNA-Seq ATP13A1-PBX4 ATP13A1 chr19 19760375 - PBX4 chr19 19710174 - Exonic hg19 LUSC TCGA-63-A5MY 2 Out-of-Frame Intra-chr p13.11 p13.11 Transcription factor 8337 ChimerSeq FusionScan TCGA_RNA-Seq RAD21-EIF3H RAD21 chr8 117886849 - EIF3H chr8 117738411 - Exonic hg19 LUSC TCGA-63-A5MY 2 5'UTR-CDS Intra-chr q24.11 q24.11 Seq+ 8338 ChimerSeq FusionScan TCGA_RNA-Seq EIF2C2-TRAPPC9 EIF2C2 chr8 141595217 - TRAPPC9 chr8 141461482 - Exonic hg19 LUSC TCGA-63-A5MY 2 In-Frame Intra-chr q24.3 8339 ChimerSeq FusionScan TCGA_RNA-Seq MIRLET7BHG-FBLN1 MIRLET7BHG chr22 46494438 + FBLN1 chr22 45996186 + Exonic hg19 LUSC TCGA-98-A538 3 5'UTR-CDS Intra-chr q13.31 q13.31 Tumor suppressor gene Seq+ 8340 ChimerSeq FusionScan TCGA_RNA-Seq EPB41L1-C20orf152 EPB41L1 chr20 34802362 + C20orf152 chr20 34582959 + Exonic hg19 LUSC TCGA-98-A538 2 In-Frame Intra-chr q11.23 Seq+ 8341 ChimerSeq FusionScan TCGA_RNA-Seq DCAF15-C19orf57 DCAF15 chr19 14063456 + C19orf57 chr19 14006359 - Exonic hg19 LUSC TCGA-52-7810 3 Out-of-Frame Intra-chr p13.12 p13.12 Seq+ 8342 ChimerSeq FusionScan TCGA_RNA-Seq XRN2-TMEM40 XRN2 chr20 21335510 + TMEM40 chr3 12791339 - Exonic hg19 LUSC TCGA-52-7810 3 CDS-5'UTR Inter-chr p11.22 p25.2 Seq+ 8343 ChimerSeq FusionScan TCGA_RNA-Seq CEP72-GALNT13 CEP72 chr5 644540 + GALNT13 chr2 155098542 + Exonic hg19 LUSC TCGA-52-7810 2 Out-of-Frame Inter-chr q23.3 8344 ChimerSeq FusionScan TCGA_RNA-Seq IL1RAP-TP63 IL1RAP chr3 190232008 + TP63 chr3 189526060 + Exonic hg19 LUSC TCGA-39-5035 5 5'UTR-CDS Intra-chr q28 q28 Tumor suppressor gene Transcription factor Seq+ 8345 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA10-SGPP2 NDUFA10 chr2 240929490 - SGPP2 chr2 223386485 + Exonic hg19 LUSC TCGA-39-5035 3 In-Frame Intra-chr q36.1 Seq+ 8346 ChimerSeq FusionScan TCGA_RNA-Seq C12orf51-PEBP1 C12orf51 chr12 112743867 - PEBP1 chr12 118575843 + Exonic hg19 LUSC TCGA-34-5232 5 In-Frame Intra-chr q24.23 Tumor suppressor gene Seq+ 8347 ChimerSeq FusionScan TCGA_RNA-Seq APPL2-CIT APPL2 chr12 105629736 - CIT chr12 120198859 - Exonic hg19 LUSC TCGA-34-5232 2 In-Frame Intra-chr q23.3 q24.23 Seq+ 8348 ChimerSeq FusionScan TCGA_RNA-Seq ULK1-FBXW8 ULK1 chr12 132403929 + FBXW8 chr12 117461951 + Exonic hg19 LUSC TCGA-34-5232 2 In-Frame Intra-chr q24.33 Other:ULK q24.22 Seq+ 8349 ChimerSeq FusionScan TCGA_RNA-Seq PPFIA1-MTL5 PPFIA1 chr11 70208594 + MTL5 chr11 68506256 - Exonic hg19 LUSC TCGA-63-A5M9 2 In-Frame Intra-chr q13.3 Seq+ 8350 ChimerSeq FusionScan TCGA_RNA-Seq STX5-SNHG1 STX5 chr11 62591637 - SNHG1 chr11 62620153 - Exonic hg19 LUSC TCGA-46-6025 4 CDS-3'UTR Intra-chr q12.3 q12.3 Seq+ 8351 ChimerSeq FusionScan TCGA_RNA-Seq RAPGEF5-MRPS22 RAPGEF5 chr7 22270464 - MRPS22 chr3 139065719 + Exonic hg19 LUSC TCGA-46-6025 2 Out-of-Frame Inter-chr p15.3 q23 Seq+ 8352 ChimerSeq FusionScan TCGA_RNA-Seq STX5-SNHG1 STX5 chr11 62591637 - SNHG1 chr11 62620311 - Exonic hg19 LUSC TCGA-46-6025 2 CDS-3'UTR Intra-chr q12.3 q12.3 Seq+ 8353 ChimerSeq FusionScan TCGA_RNA-Seq TLK1-CREG2 TLK1 chr2 171902683 - CREG2 chr2 101971828 - Exonic hg19 LUSC TCGA-46-6025 2 In-Frame Intra-chr q31.1 Other:TLK q11.2 Seq+ 8354 ChimerSeq FusionScan TCGA_RNA-Seq GRB2-PCYT1A GRB2 chr17 73389631 - PCYT1A chr3 195997412 - Exonic hg19 LUSC TCGA-46-6025 2 CDS-5'UTR Inter-chr q25.1 q29 Seq+ 8355 ChimerSeq FusionScan TCGA_RNA-Seq MARK3-TDRD9 MARK3 chr14 103958371 + TDRD9 chr14 104506532 + Exonic hg19 LUSC TCGA-77-7139 3 In-Frame Intra-chr q32.32 CAMK:CAMKL q32.33 Seq+ 8356 ChimerSeq FusionScan TCGA_RNA-Seq TMCC1-TOPBP1 TMCC1 chr3 129546645 - TOPBP1 chr3 133347577 - Exonic hg19 LUSC TCGA-77-7139 2 In-Frame Intra-chr q22.1 q22.1 8357 ChimerSeq FusionScan TCGA_RNA-Seq CBFA2T2-RALY CBFA2T2 chr20 32078107 + RALY chr20 32619327 + Exonic hg19 LUSC TCGA-77-7139 2 CDS-5'UTR Intra-chr q11.21 q11.22 8358 ChimerSeq FusionScan TCGA_RNA-Seq CCZ1-AHSA1 CCZ1 chr7 5940563 + AHSA1 chr14 77935419 + Exonic hg19 LUSC TCGA-98-A539 2 Out-of-Frame Inter-chr p22.1 q24.3 8359 ChimerSeq FusionScan TCGA_RNA-Seq CNOT1-GOT2 CNOT1 chr16 58663631 - GOT2 chr16 58757806 - Exonic hg19 LUSC TCGA-98-A539 2 5'UTR-CDS Intra-chr q21 q21 Seq+ 8360 ChimerSeq FusionScan TCGA_RNA-Seq RPGR-SDF2 RPGR chrX 38186592 - SDF2 chr17 26976294 - Exonic hg19 LUSC TCGA-98-A539 2 Out-of-Frame Inter-chr p11.4 q11.2 8361 ChimerSeq FusionScan TCGA_RNA-Seq API5-FOLH1B API5 chr11 43357544 + FOLH1B chr11 89431577 + Exonic hg19 LUSC TCGA-39-5016 2 Out-of-Frame Intra-chr p12 q14.3 8362 ChimerSeq FusionScan TCGA_RNA-Seq NCAPH-KCNIP3 NCAPH chr2 97001586 + KCNIP3 chr2 96040043 + Exonic hg19 LUSC TCGA-90-7767 3 In-Frame Intra-chr q11.2 q11.1 Transcription factor Seq+ 8363 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-NFIC RCC1 chr1 28834672 + NFIC chr19 3381709 + Exonic hg19 LUSC TCGA-90-7767 2 5'UTR-CDS Inter-chr p35.3 p13.3 Transcription factor 8364 ChimerSeq FusionScan TCGA_RNA-Seq ZHX2-LELP1 ZHX2 chr8 123794185 + LELP1 chr1 153177162 + Exonic hg19 LUSC TCGA-98-8023 2 5'UTR-5'UTR Inter-chr q24.13 Tumor suppressor gene Transcription factor q21.3 Seq+ 8365 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-TRIB1 PVT1 chr8 128806980 + TRIB1 chr8 126448247 + Exonic hg19 LUSC TCGA-43-8116 7 5'UTR-CDS Intra-chr q24.21 q24.13 Seq+ 8366 ChimerSeq FusionScan TCGA_RNA-Seq ATG7-ARMC3 ATG7 chr3 11406208 + ARMC3 chr10 23319524 + Exonic hg19 LUSC TCGA-43-8116 2 Out-of-Frame Inter-chr p25.3 p12.2 Seq+ 8367 ChimerSeq FusionScan TCGA_RNA-Seq UBE2Q2-FBXO22 UBE2Q2 chr15 76165909 + FBXO22 chr15 76222224 + Exonic hg19 LUSC TCGA-NC-A5HM 2 Out-of-Frame Intra-chr q24.2 q24.2 8368 ChimerSeq FusionScan TCGA_RNA-Seq ICAM1-HNRNPM ICAM1 chr19 10385704 + HNRNPM chr19 8550486 + Exonic hg19 LUSC TCGA-77-7338 4 In-Frame Intra-chr p13.2 p13.2 Seq+ 8369 ChimerSeq FusionScan TCGA_RNA-Seq EIF3K-PPP2R2A EIF3K chr19 39116742 + PPP2R2A chr8 26227649 + Exonic hg19 LUSC TCGA-77-7338 2 Out-of-Frame Inter-chr p21.2 Seq+ 8370 ChimerSeq FusionScan TCGA_RNA-Seq RNF19A-PRSS3 RNF19A chr8 101322094 - PRSS3 chr9 33796640 + Exonic hg19 LUSC TCGA-21-1080 12 5'UTR-CDS Inter-chr q22.2 p13.3 Seq+ 8371 ChimerSeq FusionScan TCGA_RNA-Seq PRRC2A-CUL9 PRRC2A chr6 31590678 + CUL9 chr6 43182816 + Exonic hg19 LUSC TCGA-18-3409 2 Out-of-Frame Intra-chr p21.1 8372 ChimerSeq FusionScan TCGA_RNA-Seq GIGYF2-EFHD1 GIGYF2 chr2 233562102 + EFHD1 chr2 233546294 + Exonic hg19 LUSC TCGA-94-8491 3 5'UTR-CDS Intra-chr q37.1 q37.1 Seq+ 8373 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1191-NOP16 KIAA1191 chr5 175777615 - NOP16 chr5 175811284 - Exonic hg19 LUSC TCGA-94-8491 2 In-Frame Intra-chr q35.2 q35.2 Seq+ 8374 ChimerSeq FusionScan TCGA_RNA-Seq G3BP1-SLC36A1 G3BP1 chr5 151151597 + SLC36A1 chr5 150856150 + Exonic hg19 LUSC TCGA-94-8491 2 5'UTR-CDS Intra-chr q33.1 q33.1 Seq+ 8375 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1191-NOP16 KIAA1191 chr5 175777615 - NOP16 chr5 175811375 - Exonic hg19 LUSC TCGA-94-8491 2 In-Frame Intra-chr q35.2 q35.2 Seq+ 8376 ChimerSeq FusionScan TCGA_RNA-Seq ZSWIM6-NDUFAF2 ZSWIM6 chr5 60628775 + NDUFAF2 chr5 60368951 + Exonic hg19 LUSC TCGA-94-8491 2 In-Frame Intra-chr q12.1 q12.1 Seq+ 8377 ChimerSeq FusionScan TCGA_RNA-Seq CRIPT-GAS5 CRIPT chr2 46846820 + GAS5 chr1 173835705 - Exonic hg19 LUSC TCGA-77-6845 3 CDS-3'UTR Inter-chr p21 q25.1 Tumor suppressor gene Seq+ 8378 ChimerSeq FusionScan TCGA_RNA-Seq EEF2K-C10orf35 EEF2K chr16 22218000 + C10orf35 chr10 71391235 + Exonic hg19 LUSC TCGA-77-6845 2 5'UTR-5'UTR Inter-chr p12.2 q22.1 Seq+ 8379 ChimerSeq FusionScan TCGA_RNA-Seq HYOU1-FOSL2 HYOU1 chr11 118922530 - FOSL2 chr2 28634796 + Exonic hg19 LUSC TCGA-90-A4EE 2 In-Frame Inter-chr p23.2 Transcription factor 8380 ChimerSeq FusionScan TCGA_RNA-Seq FAT1-IRF2 FAT1 chr4 187530336 - IRF2 chr4 185350224 - Exonic hg19 LUSC TCGA-63-A5MJ 2 CDS-5'UTR Intra-chr q35.2 Tumor suppressor gene q35.1 Transcription factor Seq+ 8381 ChimerSeq FusionScan TCGA_RNA-Seq NCALD-NSMCE2 NCALD chr8 102803089 - NSMCE2 chr8 126369460 + Exonic hg19 LUSC TCGA-66-2754 4 5'UTR-CDS Intra-chr q22.3 q24.13 Seq+ 8382 ChimerSeq FusionScan TCGA_RNA-Seq NCALD-NSMCE2 NCALD chr8 102928036 - NSMCE2 chr8 126369460 + Exonic hg19 LUSC TCGA-66-2754 4 5'UTR-CDS Intra-chr q22.3 q24.13 Seq+ 8383 ChimerSeq FusionScan TCGA_RNA-Seq ELMO1-SCIN ELMO1 chr7 37136223 - SCIN chr7 12684208 + Exonic hg19 LUSC TCGA-77-6842 3 In-Frame Intra-chr p14.1 p21.3 Seq+ 8384 ChimerSeq FusionScan TCGA_RNA-Seq SUMF2-PHKG1 SUMF2 chr7 56132071 + PHKG1 chr7 56149448 - Exonic hg19 LUSC TCGA-66-2777 2 Out-of-Frame Intra-chr p11.2 p11.2 Seq+ 8385 ChimerSeq FusionScan TCGA_RNA-Seq ZC3H3-PYCRL ZC3H3 chr8 144618426 - PYCRL chr8 144690296 - Exonic hg19 LUSC TCGA-66-2793 2 In-Frame Intra-chr Seq+ 8386 ChimerSeq FusionScan TCGA_RNA-Seq CLCN4-TFAP2A CLCN4 chrX 10126591 + TFAP2A chr6 10398938 - Exonic hg19 LUSC TCGA-56-8307 5 5'UTR-CDS Inter-chr p22.2 p24.3 Tumor suppressor gene Transcription factor Seq+ 8387 ChimerSeq FusionScan TCGA_RNA-Seq ITM2B-RB1 ITM2B chr13 48828072 + RB1 chr13 49027128 + Exonic hg19 LUSC TCGA-56-8307 4 In-Frame Intra-chr q14.2 q14.2 Oncogene Tumor suppressor gene Seq+ 8388 ChimerSeq FusionScan TCGA_RNA-Seq ITM2B-RB1 ITM2B chr13 48830519 + RB1 chr13 49027128 + Exonic hg19 LUSC TCGA-56-8307 3 In-Frame Intra-chr q14.2 q14.2 Oncogene Tumor suppressor gene Seq+ 8389 ChimerSeq FusionScan TCGA_RNA-Seq HIBCH-INPP1 HIBCH chr2 191184441 - INPP1 chr2 191224764 + Exonic hg19 LUSC TCGA-56-8083 2 CDS-5'UTR Intra-chr q32.2 q32.2 Seq+ 8390 ChimerSeq FusionScan TCGA_RNA-Seq SFT2D2-C1orf9 SFT2D2 chr1 168208398 + C1orf9 chr1 172520651 + Exonic hg19 LUSC TCGA-43-2576 9 In-Frame Intra-chr q24.2 Seq+ 8391 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF11-SMCP ARHGEF11 chr1 157014090 - SMCP chr1 152856878 + Exonic hg19 LUSC TCGA-43-2576 2 CDS-5'UTR Intra-chr q23.1 q21.3 Seq+ 8392 ChimerSeq FusionScan TCGA_RNA-Seq HS6ST3-EIF4EBP1 HS6ST3 chr13 96743823 + EIF4EBP1 chr8 37914598 + Exonic hg19 LUSC TCGA-43-2576 2 Out-of-Frame Inter-chr q32.1 p11.23 Seq+ 8393 ChimerSeq FusionScan TCGA_RNA-Seq HEXA-BBS4 HEXA chr15 72668060 - BBS4 chr15 72987517 + Exonic hg19 LUSC TCGA-L3-A524 7 Out-of-Frame Intra-chr q23 q24.1 Seq+ 8394 ChimerSeq FusionScan TCGA_RNA-Seq UBE2K-LIAS UBE2K chr4 39739133 + LIAS chr4 39471638 + Exonic hg19 LUSC TCGA-L3-A524 4 Out-of-Frame Intra-chr p14 p14 Seq+ 8395 ChimerSeq FusionScan TCGA_RNA-Seq RBM38-FRMD4B RBM38 chr20 55968389 + FRMD4B chr3 69267530 - Exonic hg19 LUSC TCGA-L3-A524 4 In-Frame Inter-chr q13.31 Tumor suppressor gene p14.1 Seq+ 8396 ChimerSeq FusionScan TCGA_RNA-Seq HEXA-BBS4 HEXA chr15 72668060 - BBS4 chr15 73002040 + Exonic hg19 LUSC TCGA-L3-A524 3 In-Frame Intra-chr q23 q24.1 Seq+ 8397 ChimerSeq FusionScan TCGA_RNA-Seq KREMEN1-ZNRF3 KREMEN1 chr22 29538088 + ZNRF3 chr22 29438482 + Exonic hg19 LUSC TCGA-L3-A524 2 In-Frame Intra-chr q12.1 q12.1 Seq+ 8398 ChimerSeq FusionScan TCGA_RNA-Seq PLXNC1-CRADD PLXNC1 chr12 94659001 + CRADD chr12 94243745 + Exonic hg19 LUSC TCGA-L3-A524 2 Out-of-Frame Intra-chr q22 Tumor suppressor gene q22 Seq+ 8399 ChimerSeq FusionScan TCGA_RNA-Seq EEF1G-AHNAK EEF1G chr11 62334277 - AHNAK chr11 62201363 - Exonic hg19 LUSC TCGA-NC-A5HK 8 Out-of-Frame Intra-chr q12.3 q12.3 Tumor suppressor gene Seq+ 8400 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57739004 + VMP1 chr17 57915655 + Exonic hg19 LUSC TCGA-NC-A5HK 7 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 8401 ChimerSeq FusionScan TCGA_RNA-Seq EEF1G-AHNAK EEF1G chr11 62334277 - AHNAK chr11 62259303 - Exonic hg19 LUSC TCGA-NC-A5HK 4 Out-of-Frame Intra-chr q12.3 q12.3 Tumor suppressor gene Seq+ 8402 ChimerSeq FusionScan TCGA_RNA-Seq ITCH-DYNLRB1 ITCH chr20 32957276 + DYNLRB1 chr20 33114072 + Exonic hg19 LUSC TCGA-NC-A5HK 2 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 8403 ChimerSeq FusionScan TCGA_RNA-Seq ROR1-PGM1 ROR1 chr1 64240179 + PGM1 chr1 64095095 + Exonic hg19 LUSC TCGA-77-8144 2 Out-of-Frame Intra-chr p31.3 TK:Ror p31.3 Seq+ 8404 ChimerSeq FusionScan TCGA_RNA-Seq RAI1-IFT20 RAI1 chr17 17627473 + IFT20 chr17 26659013 - Exonic hg19 LUSC TCGA-33-4533 8 5'UTR-5'UTR Intra-chr p11.2 q11.2 Seq+ 8405 ChimerSeq FusionScan TCGA_RNA-Seq PDE10A-RPS6KA2 PDE10A chr6 166075434 - RPS6KA2 chr6 166923845 - Exonic hg19 LUSC TCGA-33-4533 2 In-Frame Intra-chr q27 q27 Oncogene Tumor suppressor gene 8406 ChimerSeq FusionScan TCGA_RNA-Seq RAI1-IFT20 RAI1 chr17 17585107 + IFT20 chr17 26659013 - Exonic hg19 LUSC TCGA-33-4533 2 5'UTR-5'UTR Intra-chr p11.2 q11.2 Seq+ 8407 ChimerSeq FusionScan TCGA_RNA-Seq ADCY9-PRKCB ADCY9 chr16 4163750 - PRKCB chr16 23999828 + Exonic hg19 LUSC TCGA-33-4533 2 In-Frame Intra-chr p13.3 p12.2 Tumor suppressor gene Seq+ 8408 ChimerSeq FusionScan TCGA_RNA-Seq TAX1BP3-C17orf85 TAX1BP3 chr17 3571781 - C17orf85 chr17 3719564 - Exonic hg19 LUSC TCGA-66-2795 5 Out-of-Frame Intra-chr p13.2 Seq+ 8409 ChimerSeq FusionScan TCGA_RNA-Seq MXRA8-CDK11A MXRA8 chr1 1293835 - CDK11A chr1 1654270 - Exonic hg19 LUSC TCGA-43-5670 3 CDS-5'UTR Intra-chr p36.33 p36.33 Seq+ 8410 ChimerSeq FusionScan TCGA_RNA-Seq CCDC88B-C11orf20 CCDC88B chr11 64119858 + C11orf20 chr11 64072014 + Exonic hg19 LUSC TCGA-43-5670 3 Out-of-Frame Intra-chr q13.1 Seq+ 8411 ChimerSeq FusionScan TCGA_RNA-Seq ZNF490-FARSA ZNF490 chr19 12719971 - FARSA chr19 13041563 - Exonic hg19 LUSC TCGA-43-5670 2 In-Frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 8412 ChimerSeq FusionScan TCGA_RNA-Seq TNPO2-DNASE2 TNPO2 chr19 12816053 - DNASE2 chr19 12987177 - Exonic hg19 LUSC TCGA-43-5670 2 Out-of-Frame Intra-chr p13.13 p13.13 Seq+ 8413 ChimerSeq FusionScan TCGA_RNA-Seq REV1-MRPL30 REV1 chr2 100078957 - MRPL30 chr2 99811213 + Exonic hg19 LUSC TCGA-43-5670 2 Out-of-Frame Intra-chr q11.2 q11.2 8414 ChimerSeq FusionScan TCGA_RNA-Seq ITM2B-ESD ITM2B chr13 48807613 + ESD chr13 47367579 - Exonic hg19 LUSC TCGA-60-2706 3 CDS-5'UTR Intra-chr q14.2 q14.2 Seq+ 8415 ChimerSeq FusionScan TCGA_RNA-Seq FOXO1-ELF1 FOXO1 chr13 41239719 - ELF1 chr13 41533152 - Exonic hg19 LUSC TCGA-60-2706 2 In-Frame Intra-chr q14.11 Oncogene Tumor suppressor gene Transcription factor q14.11 Transcription factor Seq+ 8416 ChimerSeq FusionScan TCGA_RNA-Seq ZNF714-C19orf75 ZNF714 chr19 21266875 + C19orf75 chr19 51771824 + Exonic hg19 LUSC TCGA-60-2706 2 5'UTR-CDS Intra-chr p12 Transcription factor Seq+ 8417 ChimerSeq FusionScan TCGA_RNA-Seq PASK-STK25 PASK chr2 242088828 - STK25 chr2 242440211 - Exonic hg19 LUSC TCGA-39-5022 2 5'UTR-CDS Intra-chr q37.3 CAMK:CAMKL q37.3 8418 ChimerSeq FusionScan TCGA_RNA-Seq TC2N-LPP TC2N chr14 92280046 - LPP chr3 188583987 + Exonic hg19 LUSC TCGA-43-5668 4 Out-of-Frame Inter-chr q27.3 Oncogene Seq+ 8419 ChimerSeq FusionScan TCGA_RNA-Seq TC2N-LPP TC2N chr14 92302714 - LPP chr3 188583987 + Exonic hg19 LUSC TCGA-43-5668 4 5'UTR-CDS Inter-chr q27.3 Oncogene Seq+ 8420 ChimerSeq FusionScan TCGA_RNA-Seq THOC5-LYZ THOC5 chr22 29913017 - LYZ chr12 69745999 + Exonic hg19 LUSC TCGA-43-5668 2 In-Frame Inter-chr q12.2 q15 Seq+ 8421 ChimerSeq FusionScan TCGA_RNA-Seq EIF3L-TRIOBP EIF3L chr22 38274178 + TRIOBP chr22 38147778 + Exonic hg19 LUSC TCGA-43-5668 2 In-Frame Intra-chr q13.1 q13.1 Seq+ 8422 ChimerSeq FusionScan TCGA_RNA-Seq NDUFS4-EXTL3 NDUFS4 chr5 52899360 + EXTL3 chr8 28595035 + Exonic hg19 LUSC TCGA-43-5668 2 Out-of-Frame Inter-chr q11.2 p21.1 Tumor suppressor gene Seq+ 8423 ChimerSeq FusionScan TCGA_RNA-Seq ING3-IVNS1ABP ING3 chr7 120595678 + IVNS1ABP chr1 185274775 - Exonic hg19 LUSC TCGA-22-5489 2 In-Frame Inter-chr q31.31 Tumor suppressor gene q25.3 8424 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC7-LRRC19 ZCCHC7 chr9 37126939 + LRRC19 chr9 26995847 - Exonic hg19 LUSC TCGA-22-5489 2 In-Frame Intra-chr p13.2 p21.2 Seq+ 8425 ChimerSeq FusionScan TCGA_RNA-Seq LRRC19-SNAPC3 LRRC19 chr9 26996308 - SNAPC3 chr9 15453038 + Exonic hg19 LUSC TCGA-22-5489 2 Out-of-Frame Intra-chr p21.2 p22.3 Seq+ 8426 ChimerSeq FusionScan TCGA_RNA-Seq BAG2-PRIM2 BAG2 chr6 57046939 + PRIM2 chr6 57244698 + Exonic hg19 LUSC TCGA-37-A5EL 3 Out-of-Frame Intra-chr p12.1 p11.2 Seq+ 8427 ChimerSeq FusionScan TCGA_RNA-Seq PSMC6-GPR137C PSMC6 chr14 53180686 + GPR137C chr14 53064989 + Exonic hg19 LUSC TCGA-37-A5EL 2 Out-of-Frame Intra-chr q22.1 q22.1 Seq+ 8428 ChimerSeq FusionScan TCGA_RNA-Seq MRPL48-GDPD5 MRPL48 chr11 73519395 + GDPD5 chr11 75155540 - Exonic hg19 LUSC TCGA-37-4135 5 Out-of-Frame Intra-chr q13.4 q13.5 Seq+ 8429 ChimerSeq FusionScan TCGA_RNA-Seq ATG10-SHFM1 ATG10 chr5 81354421 + SHFM1 chr7 96318278 - Exonic hg19 LUSC TCGA-37-4135 2 Out-of-Frame Inter-chr q14.1 8430 ChimerSeq FusionScan TCGA_RNA-Seq ADD1-FAM193A ADD1 chr4 2845751 + FAM193A chr4 2733501 + Exonic hg19 LUSC TCGA-37-4135 2 5'UTR-5'UTR Intra-chr p16.3 p16.3 Seq+ 8431 ChimerSeq FusionScan TCGA_RNA-Seq SEMA3F-RBM6 SEMA3F chr3 50197167 + RBM6 chr3 50085677 + Exonic hg19 LUSC TCGA-37-4135 2 Out-of-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene Seq+ 8432 ChimerSeq FusionScan TCGA_RNA-Seq ARL5A-CARD8 ARL5A chr2 152663334 - CARD8 chr19 48744320 - Exonic hg19 LUSC TCGA-63-A5MM 2 CDS-5'UTR Inter-chr q23.3 q13.33 8433 ChimerSeq FusionScan TCGA_RNA-Seq GPSM2-WARS GPSM2 chr1 109419850 + WARS chr14 100809724 - Exonic hg19 LUSC TCGA-63-A5MM 2 5'UTR-CDS Inter-chr p13.3 q32.2 8434 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57728677 + VMP1 chr17 57915655 + Exonic hg19 LUSC TCGA-60-2724 3 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 8435 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57768072 + VMP1 chr17 57895072 + Exonic hg19 LUSC TCGA-60-2724 2 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 8436 ChimerSeq FusionScan TCGA_RNA-Seq PTK2-TRAPPC9 PTK2 chr8 141771263 - TRAPPC9 chr8 141034176 - Exonic hg19 LUSC TCGA-98-8020 3 In-Frame Intra-chr q24.3 q24.3 Seq+ 8437 ChimerSeq FusionScan TCGA_RNA-Seq STRBP-DENND1A STRBP chr9 126030714 - DENND1A chr9 126165769 - Exonic hg19 LUSC TCGA-NC-A5HL 4 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 8438 ChimerSeq FusionScan TCGA_RNA-Seq LRRC8D-TMEM9 LRRC8D chr1 90286850 + TMEM9 chr1 201115976 - Exonic hg19 LUSC TCGA-NC-A5HL 2 5'UTR-CDS Intra-chr p22.2 q32.1 Seq+ 8439 ChimerSeq FusionScan TCGA_RNA-Seq PCID2-ATP4B PCID2 chr13 113862912 - ATP4B chr13 114309257 - Exonic hg19 LUSC TCGA-56-A4ZK 21 Out-of-Frame Intra-chr q34 q34 Seq+ 8440 ChimerSeq FusionScan TCGA_RNA-Seq TFDP1-LAMP1 TFDP1 chr13 114240164 + LAMP1 chr13 113973783 + Exonic hg19 LUSC TCGA-56-A4ZK 8 Out-of-Frame Intra-chr q34 Transcription factor q34 Oncogene Seq+ 8441 ChimerSeq FusionScan TCGA_RNA-Seq PCID2-ATP4B PCID2 chr13 113862912 - ATP4B chr13 114307749 - Exonic hg19 LUSC TCGA-56-A4ZK 2 Out-of-Frame Intra-chr q34 q34 Seq+ 8442 ChimerSeq FusionScan TCGA_RNA-Seq MCF2L-F10 MCF2L chr13 113720484 + F10 chr13 113803229 + Exonic hg19 LUSC TCGA-56-A4ZK 2 Out-of-Frame Intra-chr q34 q34 Seq+ 8443 ChimerSeq FusionScan TCGA_RNA-Seq CECR7-MOV10L1 CECR7 chr22 17518234 + MOV10L1 chr22 50563820 + Exonic hg19 LUSC TCGA-33-AASD 2 5'UTR-CDS Intra-chr q11.1 q13.33 8444 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-LINC00578 TBL1XR1 chr3 176914908 - LINC00578 chr3 177469698 + Exonic hg19 LUSC TCGA-56-7730 11 5'UTR-5'UTR Intra-chr q26.32 q26.32 Seq+ 8445 ChimerSeq FusionScan TCGA_RNA-Seq CTNNBIP1-UBE4B CTNNBIP1 chr1 9970152 - UBE4B chr1 10238701 + Exonic hg19 LUSC TCGA-56-7730 9 5'UTR-CDS Intra-chr p36.22 Tumor suppressor gene p36.22 Tumor suppressor gene Seq+ 8446 ChimerSeq FusionScan TCGA_RNA-Seq UBE4B-PLEKHG5 UBE4B chr1 10093752 + PLEKHG5 chr1 6537718 - Exonic hg19 LUSC TCGA-56-7730 2 In-Frame Intra-chr p36.22 Tumor suppressor gene p36.31 Oncogene Seq+ 8447 ChimerSeq FusionScan TCGA_RNA-Seq CCBP2-ZNF662 CCBP2 chr3 42861203 + ZNF662 chr3 42949513 + Exonic hg19 LUSC TCGA-39-5040 3 5'UTR-5'UTR Intra-chr p22.1 Transcription factor 8448 ChimerSeq FusionScan TCGA_RNA-Seq GLG1-CFDP1 GLG1 chr16 74566018 - CFDP1 chr16 75327940 - Exonic hg19 LUSC TCGA-43-2578 5 Out-of-Frame Intra-chr q23.1 q23.1 Seq+ 8449 ChimerSeq FusionScan TCGA_RNA-Seq GBE1-ZNF385D GBE1 chr3 81627075 - ZNF385D chr3 21478695 - Exonic hg19 LUSC TCGA-43-2578 4 In-Frame Intra-chr p12.2 p24.3 Transcription factor Seq+ 8450 ChimerSeq FusionScan TCGA_RNA-Seq TXNRD1-HCFC2 TXNRD1 chr12 104682818 + HCFC2 chr12 104474523 + Exonic hg19 LUSC TCGA-43-2578 2 Out-of-Frame Intra-chr q23.3 q23.3 Seq+ 8451 ChimerSeq FusionScan TCGA_RNA-Seq TXNRD1-HCFC2 TXNRD1 chr12 104681124 + HCFC2 chr12 104476277 + Exonic hg19 LUSC TCGA-43-2578 2 Out-of-Frame Intra-chr q23.3 q23.3 Seq+ 8452 ChimerSeq FusionScan TCGA_RNA-Seq BTBD1-MRPL46 BTBD1 chr15 83725140 - MRPL46 chr15 89009004 - Exonic hg19 LUSC TCGA-66-2758 8 In-Frame Intra-chr q25.2 q25.3 Seq+ 8453 ChimerSeq FusionScan TCGA_RNA-Seq SPIN1-FUT9 SPIN1 chr9 91003453 + FUT9 chr6 96561914 + Exonic hg19 LUSC TCGA-66-2758 6 5'UTR-5'UTR Inter-chr q22.1 q16.1 Seq+ 8454 ChimerSeq FusionScan TCGA_RNA-Seq AP2A2-PSMD13 AP2A2 chr11 977224 + PSMD13 chr11 251545 + Exonic hg19 LUSC TCGA-66-2758 5 In-Frame Intra-chr p15.5 p15.5 Seq+ 8455 ChimerSeq FusionScan TCGA_RNA-Seq AP2A2-PSMD13 AP2A2 chr11 977224 + PSMD13 chr11 252504 + Exonic hg19 LUSC TCGA-66-2758 5 In-Frame Intra-chr p15.5 p15.5 Seq+ 8456 ChimerSeq FusionScan TCGA_RNA-Seq AP2A2-PSMD13 AP2A2 chr11 977224 + PSMD13 chr11 251819 + Exonic hg19 LUSC TCGA-66-2758 3 In-Frame Intra-chr p15.5 p15.5 Seq+ 8457 ChimerSeq FusionScan TCGA_RNA-Seq PPIG-MCCC1 PPIG chr2 170441000 + MCCC1 chr3 182740342 - Exonic hg19 LUSC TCGA-66-2758 2 5'UTR-CDS Inter-chr q31.1 q27.1 8458 ChimerSeq FusionScan TCGA_RNA-Seq STX12-TMEM222 STX12 chr1 28116142 + TMEM222 chr1 27657210 + Exonic hg19 LUSC TCGA-66-2758 2 In-Frame Intra-chr p35.3 p36.11 Seq+ 8459 ChimerSeq FusionScan TCGA_RNA-Seq SERINC2-ZCCHC17 SERINC2 chr1 31901915 + ZCCHC17 chr1 31836878 + Exonic hg19 LUSC TCGA-66-2758 2 Out-of-Frame Intra-chr p35.2 p35.2 Seq+ 8460 ChimerSeq FusionScan TCGA_RNA-Seq C8orf44-YWHAE C8orf44 chr8 67579936 + YWHAE chr17 1268352 - Exonic hg19 LUSC TCGA-66-2758 2 5'UTR-CDS Inter-chr q13.1 p13.3 8461 ChimerSeq FusionScan TCGA_RNA-Seq CREB1-ZBTB7A CREB1 chr2 208394858 + ZBTB7A chr19 4055245 - Exonic hg19 LUSC TCGA-94-8035 2 5'UTR-5'UTR Inter-chr q33.3 Oncogene Transcription factor p13.3 Transcription factor 8462 ChimerSeq FusionScan TCGA_RNA-Seq ABCA13-BLVRA ABCA13 chr7 48211149 + BLVRA chr7 43843274 + Exonic hg19 LUSC TCGA-90-7769 2 Out-of-Frame Intra-chr p12.3 p13 Seq+ 8463 ChimerSeq FusionScan TCGA_RNA-Seq CASP8-TTLL7 CASP8 chr2 202098835 + TTLL7 chr1 84335765 - Exonic hg19 LUSC TCGA-66-2727 3 5'UTR-CDS Inter-chr q33.1 Oncogene Tumor suppressor gene p31.1 Seq+ 8464 ChimerSeq FusionScan TCGA_RNA-Seq UHRF1BP1-ANKS1A UHRF1BP1 chr6 34791125 + ANKS1A chr6 35021875 + Exonic hg19 LUSC TCGA-66-2727 2 Out-of-Frame Intra-chr p21.31 p21.31 Seq+ 8465 ChimerSeq FusionScan TCGA_RNA-Seq LIMCH1-OCIAD2 LIMCH1 chr4 41362953 + OCIAD2 chr4 48906628 - Exonic hg19 LUSC TCGA-22-A5C4 3 CDS-5'UTR Intra-chr p13 p11 Seq+ 8466 ChimerSeq FusionScan TCGA_RNA-Seq FAHD2B-DROSHA FAHD2B chr2 97755845 - DROSHA chr5 31407052 - Exonic hg19 LUSC TCGA-22-A5C4 3 Out-of-Frame Inter-chr q11.2 p13.3 Seq+ 8467 ChimerSeq FusionScan TCGA_RNA-Seq FAHD2A-DROSHA FAHD2A chr2 96072905 + DROSHA chr5 31407052 - Exonic hg19 LUSC TCGA-22-A5C4 3 Out-of-Frame Inter-chr q11.1 p13.3 8468 ChimerSeq FusionScan TCGA_RNA-Seq ZAK-GORASP2 ZAK chr2 173955918 + GORASP2 chr2 171804859 + Exonic hg19 LUSC TCGA-22-A5C4 2 In-Frame Intra-chr TKL:MLK q31.1 8469 ChimerSeq FusionScan TCGA_RNA-Seq BCR-MYH11 BCR chr22 23637342 + MYH11 chr16 15880589 - Exonic hg19 LUSC TCGA-22-A5C4 2 Out-of-Frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene Oncogene Seq+ 8470 ChimerSeq FusionScan TCGA_RNA-Seq MAGED1-CYP4F2 MAGED1 chrX 51643392 + CYP4F2 chr19 16003392 - Exonic hg19 LUSC TCGA-22-A5C4 2 CDS-5'UTR Inter-chr p11.22 p13.12 Seq+ 8471 ChimerSeq FusionScan TCGA_RNA-Seq MKKS-MMP24 MKKS chr20 10414755 - MMP24 chr20 33834642 + Exonic hg19 LUSC TCGA-22-A5C4 2 5'UTR-CDS Intra-chr p12.2 q11.22 Seq+ 8472 ChimerSeq FusionScan TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23739997 - APOO chrX 23899069 - Exonic hg19 LUSC TCGA-43-A56U 3 In-Frame Intra-chr p22.11 p22.11 Seq+ 8473 ChimerSeq FusionScan TCGA_RNA-Seq RB1-CNIH3 RB1 chr13 48881542 + CNIH3 chr1 224868659 + Exonic hg19 LUSC TCGA-60-2695 4 In-Frame Inter-chr q14.2 Oncogene Tumor suppressor gene q42.12 Seq+ 8474 ChimerSeq FusionScan TCGA_RNA-Seq NIPBL-FGF10 NIPBL chr5 36962376 + FGF10 chr5 44310632 - Exonic hg19 LUSC TCGA-22-4595 3 In-Frame Intra-chr p13.2 p12 Seq+ 8475 ChimerSeq FusionScan TCGA_RNA-Seq TARS2-VPS45 TARS2 chr1 150464965 + VPS45 chr1 150116886 + Exonic hg19 LUSC TCGA-85-6560 3 Out-of-Frame Intra-chr q21.2 q21.2 Seq+ 8476 ChimerSeq FusionScan TCGA_RNA-Seq RPH3AL-LRRC37B RPH3AL chr17 169210 - LRRC37B chr17 30358396 + Exonic hg19 LUSC TCGA-85-6560 2 Out-of-Frame Intra-chr q11.2 8477 ChimerSeq FusionScan TCGA_RNA-Seq MDH2-STYXL1 MDH2 chr7 75677544 + STYXL1 chr7 75659842 - Exonic hg19 LUSC TCGA-22-4591 3 CDS-5'UTR Intra-chr q11.23 q11.23 Seq+ 8478 ChimerSeq FusionScan TCGA_RNA-Seq ZNF253-LINC00466 ZNF253 chr19 19976808 + LINC00466 chr1 63628353 - Exonic hg19 LUSC TCGA-18-3412 2 CDS-3'UTR Inter-chr p13.11 Transcription factor p31.3 Seq+ 8479 ChimerSeq FusionScan TCGA_RNA-Seq ZNF253-LINC00466 ZNF253 chr19 19976808 + LINC00466 chr1 63625933 - Exonic hg19 LUSC TCGA-18-3412 2 CDS-3'UTR Inter-chr p13.11 Transcription factor p31.3 Seq+ 8480 ChimerSeq FusionScan TCGA_RNA-Seq MACF1-LYPLA1 MACF1 chr1 39854330 + LYPLA1 chr8 54965316 - Exonic hg19 LUSC TCGA-70-6722 2 In-Frame Inter-chr p34.3 q11.23 8481 ChimerSeq FusionScan TCGA_RNA-Seq ECE2-HTR3D ECE2 chr3 183967678 + HTR3D chr3 183756196 + Exonic hg19 LUSC TCGA-56-5898 8 In-Frame Intra-chr q27.1 q27.1 8482 ChimerSeq FusionScan TCGA_RNA-Seq ECE2-HTR3C ECE2 chr3 183967678 + HTR3C chr3 183777615 + Exonic hg19 LUSC TCGA-56-5898 8 In-Frame Intra-chr q27.1 q27.1 Seq+ 8483 ChimerSeq FusionScan TCGA_RNA-Seq ECE2-HTR3E ECE2 chr3 183967678 + HTR3E chr3 183823915 + Exonic hg19 LUSC TCGA-56-5898 8 In-Frame Intra-chr q27.1 q27.1 8484 ChimerSeq FusionScan TCGA_RNA-Seq STRADA-LYZ STRADA chr17 61805693 - LYZ chr12 69743887 + Exonic hg19 LUSC TCGA-56-5898 2 Out-of-Frame Inter-chr q23.3 Tumor suppressor gene q15 Seq+ 8485 ChimerSeq FusionScan TCGA_RNA-Seq B3GNT5-ALG3 B3GNT5 chr3 182971260 + ALG3 chr3 183963600 - Exonic hg19 LUSC TCGA-56-5898 2 5'UTR-CDS Intra-chr q27.1 q27.1 Seq+ 8486 ChimerSeq FusionScan TCGA_RNA-Seq PPM1B-SRBD1 PPM1B chr2 44396413 + SRBD1 chr2 45647033 - Exonic hg19 LUSC TCGA-52-7809 2 5'UTR-CDS Intra-chr p21 p21 Seq+ 8487 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 LUSC TCGA-52-7809 2 Out-of-Frame Intra-chr q22.2 q22.2 8488 ChimerSeq FusionScan TCGA_RNA-Seq C12orf35-ITPR2 C12orf35 chr12 32113805 + ITPR2 chr12 26540527 - Exonic hg19 LUSC TCGA-85-8584 2 5'UTR-CDS Intra-chr p11.23 Seq+ 8489 ChimerSeq FusionScan TCGA_RNA-Seq CSMD1-C15orf41 CSMD1 chr8 4851853 - C15orf41 chr15 37100524 + Exonic hg19 LUSC TCGA-63-5131 4 Out-of-Frame Inter-chr p23.2 Tumor suppressor gene q14 Seq+ 8490 ChimerSeq FusionScan TCGA_RNA-Seq PCGF3-FANCI PCGF3 chr4 738476 + FANCI chr15 89856134 + Exonic hg19 LUSC TCGA-43-6770 9 In-Frame Inter-chr p16.3 q26.1 Seq+ 8491 ChimerSeq FusionScan TCGA_RNA-Seq RPAP3-ADAM32 RPAP3 chr12 48073275 - ADAM32 chr8 39141104 + Exonic hg19 LUSC TCGA-43-6770 2 Out-of-Frame Inter-chr q13.11 Seq+ 8492 ChimerSeq FusionScan TCGA_RNA-Seq RPAP3-ADAM32 RPAP3 chr12 48073486 - ADAM32 chr8 39141104 + Exonic hg19 LUSC TCGA-43-6770 2 Out-of-Frame Inter-chr q13.11 Seq+ 8493 ChimerSeq FusionScan TCGA_RNA-Seq SIRT1-DNAJC12 SIRT1 chr10 69651312 + DNAJC12 chr10 69583150 - Exonic hg19 LUSC TCGA-85-A50M 5 In-Frame Intra-chr q21.3 Tumor suppressor gene q21.3 Seq+ 8494 ChimerSeq FusionScan TCGA_RNA-Seq NSD1-C11orf58 NSD1 chr5 176666866 + C11orf58 chr11 16766147 + Exonic hg19 LUSC TCGA-85-A50M 4 In-Frame Inter-chr q35.3 Oncogene p15.2 Seq+ 8495 ChimerSeq FusionScan TCGA_RNA-Seq SDHAF2-FNBP4 SDHAF2 chr11 61197654 + FNBP4 chr11 47744868 - Exonic hg19 LUSC TCGA-85-A50M 3 Out-of-Frame Intra-chr q12.2 p11.2 Seq+ 8496 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D22A-FBLN1 TBC1D22A chr22 47193517 + FBLN1 chr22 45946371 + Exonic hg19 LUSC TCGA-85-A50M 2 In-Frame Intra-chr q13.31 q13.31 Tumor suppressor gene Seq+ 8497 ChimerSeq FusionScan TCGA_RNA-Seq G3BP1-PCDH9 G3BP1 chr5 151166276 + PCDH9 chr13 66879160 - Exonic hg19 LUSC TCGA-85-A50M 2 Out-of-Frame Inter-chr q33.1 q21.32 Tumor suppressor gene Seq+ 8498 ChimerSeq FusionScan TCGA_RNA-Seq VCL-ADK VCL chr10 75834661 + ADK chr10 76285013 + Exonic hg19 LUSC TCGA-77-A5G3 4 In-Frame Intra-chr q22.2 q22.2 Seq+ 8499 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0100-ALKBH5 KIAA0100 chr17 26970627 - ALKBH5 chr17 18110128 + Exonic hg19 LUSC TCGA-60-2722 6 In-Frame Intra-chr q11.2 p11.2 Seq+ 8500 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0100-ALKBH5 KIAA0100 chr17 26971075 - ALKBH5 chr17 18110128 + Exonic hg19 LUSC TCGA-60-2722 3 Out-of-Frame Intra-chr q11.2 p11.2 Seq+ 8501 ChimerSeq FusionScan TCGA_RNA-Seq ZNF33B-CCPG1 ZNF33B chr10 43127376 - CCPG1 chr15 55670574 - Exonic hg19 LUSC TCGA-37-5819 5 In-Frame Inter-chr q11.21 Transcription factor q21.3 Seq+ 8502 ChimerSeq FusionScan TCGA_RNA-Seq FAM21C-LURAP1L FAM21C chr10 46274583 + LURAP1L chr9 12821384 + Exonic hg19 LUSC TCGA-37-5819 3 In-Frame Inter-chr p23 8503 ChimerSeq FusionScan TCGA_RNA-Seq DSTN-ARPC5 DSTN chr20 17550856 + ARPC5 chr1 183602289 - Exonic hg19 LUSC TCGA-52-7812 3 Out-of-Frame Inter-chr p12.1 q25.3 Seq+ 8504 ChimerSeq FusionScan TCGA_RNA-Seq SRPK1-CEP57L1 SRPK1 chr6 35810311 - CEP57L1 chr6 109481774 + Exonic hg19 LUSC TCGA-94-7033 3 Out-of-Frame Intra-chr p21.31 CMGC:SRPK q21 Seq+ 8505 ChimerSeq FusionScan TCGA_RNA-Seq CTTN-DSG1 CTTN chr11 70269101 + DSG1 chr18 28906543 + Exonic hg19 LUSC TCGA-94-7033 2 In-Frame Inter-chr q13.3 q12.1 Seq+ 8506 ChimerSeq FusionScan TCGA_RNA-Seq CDKAL1-E2F3 CDKAL1 chr6 20649608 + E2F3 chr6 20480076 + Exonic hg19 LUSC TCGA-66-2757 2 Out-of-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Transcription factor Seq+ 8507 ChimerSeq FusionScan TCGA_RNA-Seq GON4L-SSR2 GON4L chr1 155823066 - SSR2 chr1 155979441 - Exonic hg19 LUSC TCGA-66-2757 2 Out-of-Frame Intra-chr q22 q22 Seq+ 8508 ChimerSeq FusionScan TCGA_RNA-Seq CDC42EP4-SEPT10 CDC42EP4 chr17 71308031 - SEPT10 chr2 110350696 - Exonic hg19 LUSC TCGA-66-2782 3 5'UTR-CDS Inter-chr q25.1 q13 Seq+ 8509 ChimerSeq FusionScan TCGA_RNA-Seq CISD1-GABRA1 CISD1 chr10 60029064 + GABRA1 chr5 161322671 + Exonic hg19 LUSC TCGA-66-2782 2 In-Frame Inter-chr q21.1 q34 Seq+ 8510 ChimerSeq FusionScan TCGA_RNA-Seq TP53-FXR2 TP53 chr17 7573926 - FXR2 chr17 7499312 - Exonic hg19 LUSC TCGA-22-0940 2 Out-of-Frame Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.1 KB Pub 8511 ChimerSeq FusionScan TCGA_RNA-Seq FMR1-GPC3 FMR1 chrX 146993748 + GPC3 chrX 132730627 - Exonic hg19 LUSC TCGA-37-4133 2 In-Frame Intra-chr q27.3 q26.2 Tumor suppressor gene 8512 ChimerSeq FusionScan TCGA_RNA-Seq CHD6-LIMK2 CHD6 chr20 40246978 - LIMK2 chr22 31661931 + Exonic hg19 LUSC TCGA-37-4133 2 5'UTR-CDS Inter-chr q12 q12.2 TKL:LISK 8513 ChimerSeq FusionScan TCGA_RNA-Seq TMEM167A-LRRN2 TMEM167A chr5 82373139 - LRRN2 chr1 204589346 - Exonic hg19 LUSC TCGA-37-4133 2 CDS-5'UTR Inter-chr q14.2 q32.1 8514 ChimerSeq FusionScan TCGA_RNA-Seq C20orf94-TXNL4A C20orf94 chr20 10438879 + TXNL4A chr18 77737701 - Exonic hg19 LUSC TCGA-21-1071 2 In-Frame Inter-chr q23 8515 ChimerSeq FusionScan TCGA_RNA-Seq CSDE1-GBE1 CSDE1 chr1 115300545 - GBE1 chr3 81720104 - Exonic hg19 LUSC TCGA-21-1071 2 5'UTR-CDS Inter-chr p13.2 p12.2 8516 ChimerSeq FusionScan TCGA_RNA-Seq BAG6-TPT1 BAG6 chr6 31619432 - TPT1 chr13 45911523 - Exonic hg19 LUSC TCGA-21-1071 2 In-Frame Inter-chr p21.33 q14.13 8517 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-PHF10 CPSF6 chr12 69656342 + PHF10 chr6 170116184 - Exonic hg19 LUSC TCGA-21-1071 2 3'UTR-CDS Inter-chr q15 q27 8518 ChimerSeq FusionScan TCGA_RNA-Seq VLDLR-SLC1A1 VLDLR chr9 2622271 + SLC1A1 chr9 4544566 + Exonic hg19 MESO TCGA-SH-A7BC 2 In-Frame Intra-chr p24.2 p24.2 Seq+ 8519 ChimerSeq FusionScan TCGA_RNA-Seq ARL2BP-RLN3 ARL2BP chr16 57280053 + RLN3 chr19 14141521 + Exonic hg19 MESO TCGA-MQ-A6BN 2 In-Frame Inter-chr q13 p13.12 8520 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 MESO TCGA-MQ-A4LV 2 Out-of-Frame Intra-chr q22.2 q22.2 8521 ChimerSeq FusionScan TCGA_RNA-Seq AKAP13-CASC4 AKAP13 chr15 86129054 + CASC4 chr15 44624185 + Exonic hg19 MESO TCGA-LK-A4NY 2 Out-of-Frame Intra-chr q25.3 q15.3 Seq+ 8522 ChimerSeq FusionScan TCGA_RNA-Seq BAP1-RILP BAP1 chr3 52443569 - RILP chr17 1551789 - Exonic hg19 MESO TCGA-SH-A7BD 5 Out-of-Frame Inter-chr p21.1 Oncogene Tumor suppressor gene Tumor suppressor gene Seq+ 8523 ChimerSeq FusionScan TCGA_RNA-Seq DCTN1-WDR54 DCTN1 chr2 74618920 - WDR54 chr2 74649996 + Exonic hg19 MESO TCGA-SH-A7BD 3 5'UTR-CDS Intra-chr p13.1 p13.1 Seq+ 8524 ChimerSeq FusionScan TCGA_RNA-Seq CATSPERG-RASSF1 CATSPERG chr19 38828144 + RASSF1 chr3 50369585 - Exonic hg19 MESO TCGA-SH-A7BD 2 In-Frame Inter-chr q13.2 p21.31 Tumor suppressor gene Seq+ 8525 ChimerSeq FusionScan TCGA_RNA-Seq C19orf25-PEPD C19orf25 chr19 1478772 - PEPD chr19 33882385 - Exonic hg19 MESO TCGA-MQ-A4LP 3 In-Frame Intra-chr p13.3 q13.11 Seq+ 8526 ChimerSeq FusionScan TCGA_RNA-Seq SPTBN1-RTN4 SPTBN1 chr2 54753703 + RTN4 chr2 55214834 - Exonic hg19 MESO TCGA-MQ-A4LP 2 In-Frame Intra-chr p16.2 Tumor suppressor gene p16.1 Tumor suppressor gene 8527 ChimerSeq FusionScan TCGA_RNA-Seq ATRX-ARHGEF9 ATRX chrX 77041467 - ARHGEF9 chrX 62875617 - Exonic hg19 MESO TCGA-MQ-A4LP 2 Out-of-Frame Intra-chr q21.1 Oncogene q11.2 Seq+ 8528 ChimerSeq FusionScan TCGA_RNA-Seq TASP1-TRDN TASP1 chr20 13610580 - TRDN chr6 123600227 - Exonic hg19 MESO TCGA-SC-A6LM 2 In-Frame Inter-chr p12.1 q22.31 Seq+ 8529 ChimerSeq FusionScan TCGA_RNA-Seq PRRC2A-FKBPL PRRC2A chr6 31602142 + FKBPL chr6 32097631 - Exonic hg19 MESO TCGA-TS-A7P0 2 CDS-5'UTR Intra-chr Seq+ 8530 ChimerSeq FusionScan TCGA_RNA-Seq SLC35A4-MTSS1 SLC35A4 chr5 139945556 + MTSS1 chr8 125603476 - Exonic hg19 MESO TCGA-TS-A7P0 2 5'UTR-CDS Inter-chr q31.3 q24.13 Tumor suppressor gene Seq+ 8531 ChimerSeq FusionScan TCGA_RNA-Seq SEPT9-COL7A1 SEPT9 chr17 75303279 + COL7A1 chr3 48624122 - Exonic hg19 MESO TCGA-3H-AB3M 4 Out-of-Frame Inter-chr p21.31 Seq+ 8532 ChimerSeq FusionScan TCGA_RNA-Seq VCAN-GABRA5 VCAN chr5 82849341 + GABRA5 chr15 27188361 + Exonic hg19 MESO TCGA-3H-AB3M 2 In-Frame Inter-chr q14.2 q12 Seq+ 8533 ChimerSeq FusionScan TCGA_RNA-Seq SEPT9-COL7A1 SEPT9 chr17 75277636 + COL7A1 chr3 48624122 - Exonic hg19 MESO TCGA-3H-AB3M 2 Out-of-Frame Inter-chr p21.31 Seq+ 8534 ChimerSeq FusionScan TCGA_RNA-Seq ZHX3-SMG9 ZHX3 chr20 39897629 - SMG9 chr19 44242369 - Exonic hg19 MESO TCGA-TS-A7P7 4 5'UTR-CDS Inter-chr q12 Transcription factor q13.31 Seq+ 8535 ChimerSeq FusionScan TCGA_RNA-Seq BCAT2-TMEM143 BCAT2 chr19 49314240 - TMEM143 chr19 48848611 - Exonic hg19 MESO TCGA-TS-A7P7 2 In-Frame Intra-chr q13.33 q13.33 Seq+ 8536 ChimerSeq FusionScan TCGA_RNA-Seq SETD2-SPATA12 SETD2 chr3 47155365 - SPATA12 chr3 57107393 + Exonic hg19 MESO TCGA-ZN-A9VW 3 CDS-5'UTR Intra-chr p21.31 Oncogene Tumor suppressor gene p14.3 Seq+ 8537 ChimerSeq FusionScan TCGA_RNA-Seq HSDL2-TEX10 HSDL2 chr9 115142460 + TEX10 chr9 103111654 - Exonic hg19 MESO TCGA-TS-A8AY 2 5'UTR-5'UTR Intra-chr q32 q31.1 Seq+ 8538 ChimerSeq FusionScan TCGA_RNA-Seq PCCA-SLC16A7 PCCA chr13 101020828 + SLC16A7 chr12 60098552 + Exonic hg19 MESO TCGA-3U-A98G 2 CDS-5'UTR Inter-chr q32.3 q14.1 8539 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103217296 + H2BFM chrX 103295394 + Exonic hg19 MESO TCGA-SH-A9CU 2 5'UTR-CDS Intra-chr q22.2 q22.2 8540 ChimerSeq FusionScan TCGA_RNA-Seq NRIP1-IGSF8 NRIP1 chr21 16386664 - IGSF8 chr1 160062485 - Exonic hg19 MESO TCGA-TS-A7OZ 2 5'UTR-CDS Inter-chr q21.1 q23.2 Seq+ 8541 ChimerSeq FusionScan TCGA_RNA-Seq MAP1S-ECH1 MAP1S chr19 17835998 + ECH1 chr19 39306647 - Exonic hg19 MESO TCGA-TS-A8AI 8 Out-of-Frame Intra-chr p13.11 Seq+ 8542 ChimerSeq FusionScan TCGA_RNA-Seq FRMD4A-FAM107B FRMD4A chr10 14372056 - FAM107B chr10 14572514 - Exonic hg19 MESO TCGA-TS-A8AI 2 Out-of-Frame Intra-chr p13 p13 Seq+ 8543 ChimerSeq FusionScan TCGA_RNA-Seq MICA-NCR3 MICA chr6 31368539 + NCR3 chr6 31557903 - Exonic hg19 MESO TCGA-XT-AASU 4 3'UTR-CDS Intra-chr p21.33 Seq+ 8544 ChimerSeq FusionScan TCGA_RNA-Seq KPNA1-NCK1 KPNA1 chr3 122215283 - NCK1 chr3 136646825 + Exonic hg19 MESO TCGA-XT-AASU 3 CDS-5'UTR Intra-chr q21.1 q22.3 Seq+ 8545 ChimerSeq FusionScan TCGA_RNA-Seq MICA-NCR3 MICA chr6 31368560 + NCR3 chr6 31557903 - Exonic hg19 MESO TCGA-XT-AASU 2 5'UTR-5'UTR Intra-chr p21.33 Seq+ 8546 ChimerSeq FusionScan TCGA_RNA-Seq AKT3-HEATR1 AKT3 chr1 243800912 - HEATR1 chr1 236714290 - Exonic hg19 MESO TCGA-UT-A88E 3 Out-of-Frame Intra-chr AGC:Akt Oncogene q43 Seq+ 8547 ChimerSeq FusionScan TCGA_RNA-Seq ALG9-PDGFD ALG9 chr11 111706887 - PDGFD chr11 103818452 - Exonic hg19 MESO TCGA-UT-A88E 3 In-Frame Intra-chr q23.1 q22.3 Seq+ 8548 ChimerSeq FusionScan TCGA_RNA-Seq SHB-CDKN2A SHB chr9 38067925 - CDKN2A chr9 21968241 - Exonic hg19 MESO TCGA-TS-A7P1 2 Out-of-Frame Intra-chr p13.1 p21.3 Oncogene Tumor suppressor gene Seq+ 8549 ChimerSeq FusionScan TCGA_RNA-Seq RIOK3-C10orf76 RIOK3 chr18 21033466 + C10orf76 chr10 103735057 - Exonic hg19 MESO TCGA-ZN-A9VQ 2 Out-of-Frame Inter-chr q11.2 Atypical:RIO q24.32 Seq+ 8550 ChimerSeq FusionScan TCGA_RNA-Seq CDCA7L-PASD1 CDCA7L chr7 21956371 - PASD1 chrX 150828184 + Exonic hg19 MESO TCGA-ZN-A9VP 4 In-Frame Inter-chr p15.3 q28 Seq+ 8551 ChimerSeq FusionScan TCGA_RNA-Seq NCK2-NUP93 NCK2 chr2 106471745 + NUP93 chr16 56782145 + Exonic hg19 MESO TCGA-ZN-A9VP 4 CDS-5'UTR Inter-chr q12.2 q13 Seq+ 8552 ChimerSeq FusionScan TCGA_RNA-Seq OSCP1-NF1 OSCP1 chr1 36915858 - NF1 chr17 29701030 + Exonic hg19 MESO TCGA-UD-AAC4 3 In-Frame Inter-chr p34.3 Tumor suppressor gene q11.2 Oncogene Tumor suppressor gene Seq+ 8553 ChimerSeq FusionScan TCGA_RNA-Seq EXOSC4-NEIL2 EXOSC4 chr8 145133802 + NEIL2 chr8 11637106 + Exonic hg19 MESO TCGA-UD-AAC4 2 In-Frame Intra-chr q24.3 p23.1 Seq+ 8554 ChimerSeq FusionScan TCGA_RNA-Seq CLDND1-ARPP21 CLDND1 chr3 98241692 - ARPP21 chr3 35721278 + Exonic hg19 MESO TCGA-TS-A7P3 2 5'UTR-5'UTR Intra-chr q11.2 p22.3 Seq+ 8555 ChimerSeq FusionScan TCGA_RNA-Seq TUBB4A-RSPRY1 TUBB4A chr19 6502166 - RSPRY1 chr16 57238415 + Exonic hg19 MESO TCGA-YS-AA4M 3 CDS-5'UTR Inter-chr p13.3 q13 8556 ChimerSeq FusionScan TCGA_RNA-Seq TUBB3-RSPRY1 TUBB3 chr16 89989866 + RSPRY1 chr16 57238415 + Exonic hg19 MESO TCGA-YS-AA4M 3 CDS-5'UTR Intra-chr q24.3 q13 Seq+ 8557 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD11-MAP1LC3B ANKRD11 chr16 89556652 - MAP1LC3B chr16 87432420 + Exonic hg19 MESO TCGA-YS-AA4M 2 5'UTR-CDS Intra-chr q24.3 q24.2 8558 ChimerSeq FusionScan TCGA_RNA-Seq NFAT5-NUP93 NFAT5 chr16 69600277 + NUP93 chr16 56832387 + Exonic hg19 MESO TCGA-YS-AA4M 2 Out-of-Frame Intra-chr q22.1 Transcription factor q13 Seq+ 8559 ChimerSeq FusionScan TCGA_RNA-Seq COL5A1-FAM3C COL5A1 chr9 137534142 + FAM3C chr7 120991323 - Exonic hg19 OV TCGA-13-1485 2 Out-of-Frame Inter-chr q34.3 q31.31 8560 ChimerSeq FusionScan TCGA_RNA-Seq FBXW11-NPM1 FBXW11 chr5 171433461 - NPM1 chr5 170832305 + Exonic hg19 OV TCGA-24-1563 2 In-Frame Intra-chr q35.1 q35.1 Oncogene Tumor suppressor gene 8561 ChimerSeq FusionScan TCGA_RNA-Seq DCUN1D2-NVL DCUN1D2 chr13 114144981 - NVL chr1 224455835 - Exonic hg19 OV TCGA-24-1563 2 In-Frame Inter-chr q34 q42.11 8562 ChimerSeq FusionScan TCGA_RNA-Seq WDR1-ITGB1 WDR1 chr4 10105519 - ITGB1 chr10 33224486 - Exonic hg19 OV TCGA-24-1563 2 CDS-5'UTR Inter-chr p16.1 p11.22 Tumor suppressor gene 8563 ChimerSeq FusionScan TCGA_RNA-Seq ZMPSTE24-CAP1 ZMPSTE24 chr1 40737707 + CAP1 chr1 40535361 + Exonic hg19 OV TCGA-61-1736 15 In-Frame Intra-chr p34.2 p34.2 Seq+ 8564 ChimerSeq FusionScan TCGA_RNA-Seq PPT1-CAP1 PPT1 chr1 40544231 - CAP1 chr1 40527406 + Exonic hg19 OV TCGA-61-1736 14 In-Frame Intra-chr p34.2 p34.2 Seq+ 8565 ChimerSeq FusionScan TCGA_RNA-Seq YY1AP1-ARHGEF2 YY1AP1 chr1 155638417 - ARHGEF2 chr1 155939091 - Exonic hg19 OV TCGA-61-1736 11 In-Frame Intra-chr q22 q22 Seq+ 8566 ChimerSeq FusionScan TCGA_RNA-Seq TPX2-DEFB123 TPX2 chr20 30371724 + DEFB123 chr20 30037831 + Exonic hg19 OV TCGA-61-1736 2 Out-of-Frame Intra-chr q11.21 q11.21 Seq+ 8567 ChimerSeq FusionScan TCGA_RNA-Seq SNHG1-EIF4A1 SNHG1 chr11 62622895 - EIF4A1 chr17 7481144 + Exonic hg19 OV TCGA-61-1736 2 3'UTR-CDS Inter-chr q12.3 p13.1 8568 ChimerSeq FusionScan TCGA_RNA-Seq DDTL-C21orf33 DDTL chr22 24309749 + C21orf33 chr21 45555941 + Exonic hg19 OV TCGA-13-0797 22 In-Frame Inter-chr q22.3 Seq+ 8569 ChimerSeq FusionScan TCGA_RNA-Seq SWI5-RINT1 SWI5 chr9 131048312 + RINT1 chr7 105207565 + Exonic hg19 OV TCGA-13-0797 7 Out-of-Frame Inter-chr q34.11 q22.3 Tumor suppressor gene Seq+ 8570 ChimerSeq FusionScan TCGA_RNA-Seq KLF3-FAM114A1 KLF3 chr4 38682303 + FAM114A1 chr4 38924390 + Exonic hg19 OV TCGA-13-0797 6 In-Frame Intra-chr p14 Transcription factor p14 Seq+ 8571 ChimerSeq FusionScan TCGA_RNA-Seq GAS6-GET4 GAS6 chr13 114566547 - GET4 chr7 925692 + Exonic hg19 OV TCGA-13-0797 2 Out-of-Frame Inter-chr q34 Oncogene p22.3 8572 ChimerSeq FusionScan TCGA_RNA-Seq KPNA4-ANXA2 KPNA4 chr3 160225894 - ANXA2 chr15 60649435 - Exonic hg19 OV TCGA-13-0797 2 Out-of-Frame Inter-chr q25.33 q22.2 8573 ChimerSeq FusionScan TCGA_RNA-Seq TFCP2-MT1E TFCP2 chr12 51566083 - MT1E chr16 56660377 + Exonic hg19 OV TCGA-13-0797 2 Out-of-Frame Inter-chr q13.13 Transcription factor q13 8574 ChimerSeq FusionScan TCGA_RNA-Seq NRBP2-SLC25A10 NRBP2 chr8 144920851 - SLC25A10 chr17 79686860 + Exonic hg19 OV TCGA-13-0797 2 In-Frame Inter-chr q24.3 Other:NRBP q25.3 8575 ChimerSeq FusionScan TCGA_RNA-Seq ZNF341-C12orf65 ZNF341 chr20 32319858 + C12orf65 chr12 123738193 + Exonic hg19 OV TCGA-13-0797 2 CDS-5'UTR Inter-chr q11.22 Transcription factor q24.31 8576 ChimerSeq FusionScan TCGA_RNA-Seq EML4-LUC7L2 EML4 chr2 42531691 + LUC7L2 chr7 139056132 + Exonic hg19 OV TCGA-13-0797 2 CDS-5'UTR Inter-chr p21 Oncogene q34 8577 ChimerSeq FusionScan TCGA_RNA-Seq PUS7L-GNB1 PUS7L chr12 44152532 - GNB1 chr1 1718876 - Exonic hg19 OV TCGA-13-0797 2 5'UTR-CDS Inter-chr q12 p36.33 8578 ChimerSeq FusionScan TCGA_RNA-Seq RBFA-SPG11 RBFA chr18 77794653 + SPG11 chr15 44952814 - Exonic hg19 OV TCGA-13-0797 2 In-Frame Inter-chr q23 q21.1 8579 ChimerSeq FusionScan TCGA_RNA-Seq ZNF160-CYHR1 ZNF160 chr19 53594889 - CYHR1 chr8 145690479 - Exonic hg19 OV TCGA-13-0797 2 5'UTR-5'UTR Inter-chr q13.42 Transcription factor q24.3 8580 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD17-AK2 ANKRD17 chr4 74123992 - AK2 chr1 33480195 - Exonic hg19 OV TCGA-29-1691 17 Out-of-Frame Inter-chr q13.3 p35.1 Seq+ 8581 ChimerSeq FusionScan TCGA_RNA-Seq ROCK2-MEIS1 ROCK2 chr2 11484121 - MEIS1 chr2 66775074 + Exonic hg19 OV TCGA-29-1691 9 In-Frame Intra-chr p25.1 AGC:DMPK p14 Transcription factor Seq+ 8582 ChimerSeq FusionScan TCGA_RNA-Seq ADRBK2-NOTCH2NL ADRBK2 chr22 26000420 + NOTCH2NL chr1 145248812 + Exonic hg19 OV TCGA-29-1691 6 CDS-5'UTR Inter-chr q21.1 8583 ChimerSeq FusionScan TCGA_RNA-Seq NUP133-PARPBP NUP133 chr1 229633882 - PARPBP chr12 102589728 + Exonic hg19 OV TCGA-29-1691 4 Out-of-Frame Inter-chr q42.13 q23.2 Seq+ 8584 ChimerSeq FusionScan TCGA_RNA-Seq DSP-FARS2 DSP chr6 7542318 + FARS2 chr6 5545412 + Exonic hg19 OV TCGA-29-1691 3 Out-of-Frame Intra-chr p24.3 Tumor suppressor gene p25.1 Seq+ 8585 ChimerSeq FusionScan TCGA_RNA-Seq NIPAL2-EBAG9 NIPAL2 chr8 99306230 - EBAG9 chr8 110576667 + Exonic hg19 OV TCGA-29-1691 3 Out-of-Frame Intra-chr q22.2 q23.2 Seq+ 8586 ChimerSeq FusionScan TCGA_RNA-Seq GMCL1-ARHGAP25 GMCL1 chr2 70098964 + ARHGAP25 chr2 69046254 + Exonic hg19 OV TCGA-29-1691 3 Out-of-Frame Intra-chr p13.3 p13.3 8587 ChimerSeq FusionScan TCGA_RNA-Seq MCRS1-URI1 MCRS1 chr12 49960504 - URI1 chr19 30462099 + Exonic hg19 OV TCGA-29-1691 2 Out-of-Frame Inter-chr q13.12 q12 8588 ChimerSeq FusionScan TCGA_RNA-Seq TAF11-MYO19 TAF11 chr6 34847743 - MYO19 chr17 34863763 - Exonic hg19 OV TCGA-29-1691 2 In-Frame Inter-chr p21.31 q12 8589 ChimerSeq FusionScan TCGA_RNA-Seq ALDH3B1-C11orf24 ALDH3B1 chr11 67782929 + C11orf24 chr11 68035719 - Exonic hg19 OV TCGA-29-1691 2 CDS-5'UTR Intra-chr q13.2 q13.2 8590 ChimerSeq FusionScan TCGA_RNA-Seq SUGP2-PTMS SUGP2 chr19 19105174 - PTMS chr12 6879557 + Exonic hg19 OV TCGA-29-1691 2 3'UTR-CDS Inter-chr p13.11 p13.31 8591 ChimerSeq FusionScan TCGA_RNA-Seq IPPK-IARS IPPK chr9 95396667 - IARS chr9 94973171 - Exonic hg19 OV TCGA-29-1691 2 Out-of-Frame Intra-chr q22.31 q22.31 Seq+ 8592 ChimerSeq FusionScan TCGA_RNA-Seq NSD1-ZNF346 NSD1 chr5 176678854 + ZNF346 chr5 176468126 + Exonic hg19 OV TCGA-24-1427 7 In-Frame Intra-chr q35.3 Oncogene q35.2 Transcription factor Seq+ 8593 ChimerSeq FusionScan TCGA_RNA-Seq PGS1-SYNGR2 PGS1 chr17 76374889 + SYNGR2 chr17 76167819 + Exonic hg19 OV TCGA-24-1427 3 Out-of-Frame Intra-chr q25.3 q25.3 Seq+ 8594 ChimerSeq FusionScan TCGA_RNA-Seq PSMF1-RAB6A PSMF1 chr20 1115949 + RAB6A chr11 73390765 - Exonic hg19 OV TCGA-24-1427 2 Out-of-Frame Inter-chr p13 q13.4 8595 ChimerSeq FusionScan TCGA_RNA-Seq SEC31A-SCD5 SEC31A chr4 83812240 - SCD5 chr4 83557976 - Exonic hg19 OV TCGA-59-2352 2 Out-of-Frame Intra-chr q21.22 q21.22 Seq+ 8596 ChimerSeq FusionScan TCGA_RNA-Seq PAFAH1B1-NTN1 PAFAH1B1 chr17 2497300 + NTN1 chr17 9066129 + Exonic hg19 OV TCGA-59-2352 2 5'UTR-CDS Intra-chr p13.3 Tumor suppressor gene p13.1 Seq+ 8597 ChimerSeq FusionScan TCGA_RNA-Seq LCLAT1-SNHG11 LCLAT1 chr2 30756180 + SNHG11 chr20 37076108 + Exonic hg19 OV TCGA-13-0795 3 CDS-5'UTR Inter-chr p23.1 q11.23 8598 ChimerSeq FusionScan TCGA_RNA-Seq VTCN1-C11orf73 VTCN1 chr1 117753445 - C11orf73 chr11 86055644 + Exonic hg19 OV TCGA-13-0795 2 Out-of-Frame Inter-chr p12 8599 ChimerSeq FusionScan TCGA_RNA-Seq SPAST-TRAF1 SPAST chr2 32289315 + TRAF1 chr9 123688966 - Exonic hg19 OV TCGA-13-0795 2 CDS-5'UTR Inter-chr p22.3 q33.2 8600 ChimerSeq FusionScan TCGA_RNA-Seq SPRED3-RFXANK SPRED3 chr19 38885116 + RFXANK chr19 19304747 + Exonic hg19 OV TCGA-13-0795 2 3'UTR-5'UTR Intra-chr q13.2 p13.11 8601 ChimerSeq FusionScan TCGA_RNA-Seq TRIM44-SERGEF TRIM44 chr11 35706884 + SERGEF chr11 17809960 - Exonic hg19 OV TCGA-13-0795 2 Out-of-Frame Intra-chr p13 p15.1 8602 ChimerSeq FusionScan TCGA_RNA-Seq C1orf198-AGT C1orf198 chr1 230979099 - AGT chr1 230846599 - Exonic hg19 OV TCGA-13-0795 2 CDS-5'UTR Intra-chr q42.2 q42.2 Seq+ 8603 ChimerSeq FusionScan TCGA_RNA-Seq SNORD76-C7orf59 SNORD76 chr1 173835772 - C7orf59 chr7 99746529 + Exonic hg19 OV TCGA-13-0795 2 3'UTR-5'UTR Inter-chr 8604 ChimerSeq FusionScan TCGA_RNA-Seq RPL18A-FCHO1 RPL18A chr19 17970783 + FCHO1 chr19 17865125 + Exonic hg19 OV TCGA-29-1694 7 CDS-5'UTR Intra-chr p13.11 p13.11 8605 ChimerSeq FusionScan TCGA_RNA-Seq RPL18A-FCHO1 RPL18A chr19 17970783 + FCHO1 chr19 17873570 + Exonic hg19 OV TCGA-29-1694 3 In-Frame Intra-chr p13.11 p13.11 8606 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB20-LSAMP ZBTB20 chr3 114866065 - LSAMP chr3 115571464 - Exonic hg19 OV TCGA-29-1694 2 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.31 Tumor suppressor gene Seq+ 8607 ChimerSeq FusionScan TCGA_RNA-Seq EPS15L1-C19orf42 EPS15L1 chr19 16582723 - C19orf42 chr19 16758072 - Exonic hg19 OV TCGA-29-1694 2 Out-of-Frame Intra-chr p13.11 8608 ChimerSeq FusionScan TCGA_RNA-Seq DCUN1D2-TMCO3 DCUN1D2 chr13 114144981 - TMCO3 chr13 114174930 + Exonic hg19 OV TCGA-29-1694 2 Out-of-Frame Intra-chr q34 q34 Seq+ 8609 ChimerSeq FusionScan TCGA_RNA-Seq WDR44-PHF21A WDR44 chrX 117566857 + PHF21A chr11 45959863 - Exonic hg19 OV TCGA-29-1694 2 In-Frame Inter-chr q24 p11.2 Transcription factor 8610 ChimerSeq FusionScan TCGA_RNA-Seq PSMC4-RFC3 PSMC4 chr19 40480735 + RFC3 chr13 34540223 + Exonic hg19 OV TCGA-29-1701 6 Out-of-Frame Inter-chr q13.2 8611 ChimerSeq FusionScan TCGA_RNA-Seq ZNF136-CALR ZNF136 chr19 12274021 + CALR chr19 13049947 + Exonic hg19 OV TCGA-29-1701 3 Out-of-Frame Intra-chr p13.2 Transcription factor p13.13 Seq+ 8612 ChimerSeq FusionScan TCGA_RNA-Seq ZFAND1-RAD54B ZFAND1 chr8 82626152 - RAD54B chr8 95406110 - Exonic hg19 OV TCGA-29-1701 2 Out-of-Frame Intra-chr q21.13 q22.1 8613 ChimerSeq FusionScan TCGA_RNA-Seq IL4I1-CDK5RAP3 IL4I1 chr19 50400091 - CDK5RAP3 chr17 46054077 + Exonic hg19 OV TCGA-29-1701 2 5'UTR-CDS Inter-chr q13.33 q21.32 8614 ChimerSeq FusionScan TCGA_RNA-Seq COL18A1-DAZAP1 COL18A1 chr21 46825388 + DAZAP1 chr19 1417498 + Exonic hg19 OV TCGA-29-1701 2 Out-of-Frame Inter-chr q22.3 p13.3 8615 ChimerSeq FusionScan TCGA_RNA-Seq SCRIB-PUF60 SCRIB chr8 144889093 - PUF60 chr8 144906569 - Exonic hg19 OV TCGA-23-1023 10 In-Frame Intra-chr Tumor suppressor gene Seq+ 8616 ChimerSeq FusionScan TCGA_RNA-Seq ERO1LB-HEATR1 ERO1LB chr1 236415349 - HEATR1 chr1 236721829 - Exonic hg19 OV TCGA-23-1023 6 In-Frame Intra-chr q43 Seq+ 8617 ChimerSeq FusionScan TCGA_RNA-Seq RASSF5-SRGAP2 RASSF5 chr1 206711622 + SRGAP2 chr1 206626545 + Exonic hg19 OV TCGA-23-1023 4 Out-of-Frame Intra-chr q32.1 Tumor suppressor gene q32.1 Tumor suppressor gene 8618 ChimerSeq FusionScan TCGA_RNA-Seq DLGAP1-GNAS DLGAP1 chr18 3534191 - GNAS chr20 57470666 + Exonic hg19 OV TCGA-23-1023 2 In-Frame Inter-chr p11.31 q13.32 Oncogene 8619 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-TTC7B RCC1 chr1 28832596 + TTC7B chr14 91196540 - Exonic hg19 OV TCGA-23-1023 2 5'UTR-CDS Inter-chr p35.3 q32.11 8620 ChimerSeq FusionScan TCGA_RNA-Seq CSTF3-PRMT2 CSTF3 chr11 33163212 - PRMT2 chr21 48063446 + Exonic hg19 OV TCGA-23-1023 2 In-Frame Inter-chr p13 q22.3 8621 ChimerSeq FusionScan TCGA_RNA-Seq ABCC1-RAB1A ABCC1 chr16 16150152 + RAB1A chr2 65318212 - Exonic hg19 OV TCGA-23-1023 2 In-Frame Inter-chr p14 8622 ChimerSeq FusionScan TCGA_RNA-Seq EPS15L1-SLC15A5 EPS15L1 chr19 16495939 - SLC15A5 chr12 16392801 - Exonic hg19 OV TCGA-23-1023 2 In-Frame Inter-chr p13.11 p12.3 8623 ChimerSeq FusionScan TCGA_RNA-Seq KCNQ3-NDRG1 KCNQ3 chr8 133492393 - NDRG1 chr8 134276895 - Exonic hg19 OV TCGA-23-1023 2 Out-of-Frame Intra-chr q24.22 q24.22 Tumor suppressor gene Seq+ 8624 ChimerSeq FusionScan TCGA_RNA-Seq LAMA5-C20orf151 LAMA5 chr20 60889854 - C20orf151 chr20 60990343 - Exonic hg19 OV TCGA-23-1023 2 In-Frame Intra-chr q13.33 Seq+ 8625 ChimerSeq FusionScan TCGA_RNA-Seq PUF60-PTTG1 PUF60 chr8 144902835 - PTTG1 chr5 159848864 + Exonic hg19 OV TCGA-23-1023 2 CDS-5'UTR Inter-chr q33.3 8626 ChimerSeq FusionScan TCGA_RNA-Seq AHSA2-C2orf74 AHSA2 chr2 61413632 + C2orf74 chr2 61389976 + Exonic hg19 OV TCGA-23-1023 2 Out-of-Frame Intra-chr p15 p15 Seq+ 8627 ChimerSeq FusionScan TCGA_RNA-Seq NMNAT3-RBP1 NMNAT3 chr3 139346457 - RBP1 chr3 139237364 - Exonic hg19 OV TCGA-24-2261 4 Out-of-Frame Intra-chr q23 q23 Tumor suppressor gene Seq+ 8628 ChimerSeq FusionScan TCGA_RNA-Seq GAS6-SETD3 GAS6 chr13 114566547 - SETD3 chr14 99866596 - Exonic hg19 OV TCGA-24-2261 2 Out-of-Frame Inter-chr q34 Oncogene q32.2 8629 ChimerSeq FusionScan TCGA_RNA-Seq SCARB2-APBB2 SCARB2 chr4 77116859 - APBB2 chr4 41145159 - Exonic hg19 OV TCGA-24-2261 2 CDS-5'UTR Intra-chr q21.1 p13 8630 ChimerSeq FusionScan TCGA_RNA-Seq MCM5-LYN MCM5 chr22 35799535 + LYN chr8 56910904 + Exonic hg19 OV TCGA-25-1329 2 In-Frame Inter-chr q12.3 q12.1 TK:Src Seq+ 8631 ChimerSeq FusionScan TCGA_RNA-Seq UVRAG-TRIM29 UVRAG chr11 75572825 + TRIM29 chr11 119983184 - Exonic hg19 OV TCGA-23-1030 34 In-Frame Intra-chr q13.5 Tumor suppressor gene q23.3 Seq+ 8632 ChimerSeq FusionScan TCGA_RNA-Seq HEATR7A-XRCC5 HEATR7A chr8 145255444 + XRCC5 chr2 217054947 + Exonic hg19 OV TCGA-23-1030 9 In-Frame Inter-chr q35 Tumor suppressor gene 8633 ChimerSeq FusionScan TCGA_RNA-Seq FAM222B-SEZ6 FAM222B chr17 27093603 - SEZ6 chr17 27309057 - Exonic hg19 OV TCGA-23-1030 6 In-Frame Intra-chr q11.2 q11.2 Seq+ 8634 ChimerSeq FusionScan TCGA_RNA-Seq NCOA3-EYA2 NCOA3 chr20 46130763 + EYA2 chr20 45801354 + Exonic hg19 OV TCGA-23-1030 6 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.12 Seq+ 8635 ChimerSeq FusionScan TCGA_RNA-Seq YWHAE-SLC43A2 YWHAE chr17 1303340 - SLC43A2 chr17 1496573 - Exonic hg19 OV TCGA-23-1030 5 Out-of-Frame Intra-chr p13.3 Seq+ 8636 ChimerSeq FusionScan TCGA_RNA-Seq SPRED3-RFXANK SPRED3 chr19 38885116 + RFXANK chr19 19304747 + Exonic hg19 OV TCGA-23-1030 2 3'UTR-5'UTR Intra-chr q13.2 p13.11 8637 ChimerSeq FusionScan TCGA_RNA-Seq CCND3-C6orf132 CCND3 chr6 42016238 - C6orf132 chr6 42078029 - Exonic hg19 OV TCGA-23-1030 2 5'UTR-CDS Intra-chr p21.1 p21.1 Seq+ 8638 ChimerSeq FusionScan TCGA_RNA-Seq DLG1-PAK2 DLG1 chr3 197009549 - PAK2 chr3 196534652 + Exonic hg19 OV TCGA-25-1328 4 In-Frame Intra-chr q29 Tumor suppressor gene q29 STE:STE20 Seq+ 8639 ChimerSeq FusionScan TCGA_RNA-Seq PAK2-DLG1 PAK2 chr3 196532254 + DLG1 chr3 196876667 - Exonic hg19 OV TCGA-25-1328 3 In-Frame Intra-chr q29 STE:STE20 q29 Tumor suppressor gene Seq+ 8640 ChimerSeq FusionScan TCGA_RNA-Seq PARD3-CCNY PARD3 chr10 35103803 - CCNY chr10 35537036 + Exonic hg19 OV TCGA-04-1542 6 CDS-5'UTR Intra-chr p11.21 p11.21 Seq+ 8641 ChimerSeq FusionScan TCGA_RNA-Seq SSBP2-SERINC5 SSBP2 chr5 80762792 - SERINC5 chr5 79407525 - Exonic hg19 OV TCGA-04-1542 4 CDS-3'UTR Intra-chr q14.1 Tumor suppressor gene q14.1 Seq+ 8642 ChimerSeq FusionScan TCGA_RNA-Seq POLDIP3-RRP7A POLDIP3 chr22 43010804 - RRP7A chr22 42909001 - Exonic hg19 OV TCGA-04-1542 3 Out-of-Frame Intra-chr q13.2 q13.2 8643 ChimerSeq FusionScan TCGA_RNA-Seq RAB40C-C21orf56 RAB40C chr16 640433 + C21orf56 chr21 47588572 - Exonic hg19 OV TCGA-04-1542 2 In-Frame Inter-chr p13.3 8644 ChimerSeq FusionScan TCGA_RNA-Seq PPIA-TOP1 PPIA chr7 44836392 + TOP1 chr20 39690033 + Exonic hg19 OV TCGA-04-1542 2 Out-of-Frame Inter-chr p13 q12 Oncogene 8645 ChimerSeq FusionScan TCGA_RNA-Seq MIER2-RPL26 MIER2 chr19 325634 - RPL26 chr17 8285633 - Exonic hg19 OV TCGA-29-1697 8 CDS-5'UTR Inter-chr p13.3 p13.1 Seq+ 8646 ChimerSeq FusionScan TCGA_RNA-Seq EPN1-CCDC106 EPN1 chr19 56190221 + CCDC106 chr19 56160367 + Exonic hg19 OV TCGA-29-1697 8 CDS-5'UTR Intra-chr q13.42 q13.42 Seq+ 8647 ChimerSeq FusionScan TCGA_RNA-Seq DAZAP1-NDUFS7 DAZAP1 chr19 1417539 + NDUFS7 chr19 1387809 + Exonic hg19 OV TCGA-29-1697 8 In-Frame Intra-chr p13.3 p13.3 Seq+ 8648 ChimerSeq FusionScan TCGA_RNA-Seq CELSR2-KIAA1324 CELSR2 chr1 109808828 + KIAA1324 chr1 109714487 + Exonic hg19 OV TCGA-29-1697 8 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 8649 ChimerSeq FusionScan TCGA_RNA-Seq CBFB-CES4A CBFB chr16 67070658 + CES4A chr16 67029530 + Exonic hg19 OV TCGA-29-1697 6 Out-of-Frame Intra-chr q22.1 q22.1 Seq+ 8650 ChimerSeq FusionScan TCGA_RNA-Seq EPS15L1-CHERP EPS15L1 chr19 16582723 - CHERP chr19 16652854 - Exonic hg19 OV TCGA-29-1697 6 Out-of-Frame Intra-chr p13.11 p13.11 Seq+ 8651 ChimerSeq FusionScan TCGA_RNA-Seq CBX1-SKAP1 CBX1 chr17 46154226 - SKAP1 chr17 46214699 - Exonic hg19 OV TCGA-29-1697 5 Out-of-Frame Intra-chr q21.32 q21.32 Seq+ 8652 ChimerSeq FusionScan TCGA_RNA-Seq ESR1-MTHFD1L ESR1 chr6 152129499 + MTHFD1L chr6 151330954 + Exonic hg19 OV TCGA-29-1697 5 Out-of-Frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 Seq+ 8653 ChimerSeq FusionScan TCGA_RNA-Seq ST3GAL2-COG4 ST3GAL2 chr16 70432094 - COG4 chr16 70524295 - Exonic hg19 OV TCGA-29-1697 5 In-Frame Intra-chr q22.1 q22.1 Seq+ 8654 ChimerSeq FusionScan TCGA_RNA-Seq LRIG1-SLC25A26 LRIG1 chr3 66436404 - SLC25A26 chr3 66419901 + Exonic hg19 OV TCGA-29-1697 4 In-Frame Intra-chr Tumor suppressor gene Seq+ 8655 ChimerSeq FusionScan TCGA_RNA-Seq IP6K2-PRKAR2A IP6K2 chr3 48754589 - PRKAR2A chr3 48845117 - Exonic hg19 OV TCGA-29-1697 3 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 8656 ChimerSeq FusionScan TCGA_RNA-Seq FBXL8-LCAT FBXL8 chr16 67195840 + LCAT chr16 67974381 - Exonic hg19 OV TCGA-29-1697 2 Out-of-Frame Intra-chr q22.1 q22.1 8657 ChimerSeq FusionScan TCGA_RNA-Seq PXMP2-DDB2 PXMP2 chr12 133277955 + DDB2 chr11 47259387 + Exonic hg19 OV TCGA-29-1697 2 In-Frame Inter-chr q24.33 p11.2 Oncogene Tumor suppressor gene 8658 ChimerSeq FusionScan TCGA_RNA-Seq VWC2-C7orf72 VWC2 chr7 49842436 + C7orf72 chr7 50143909 + Exonic hg19 OV TCGA-29-1697 2 In-Frame Intra-chr p12.2 p12.2 8659 ChimerSeq FusionScan TCGA_RNA-Seq CBX1-SKAP1 CBX1 chr17 46178629 - SKAP1 chr17 46214699 - Exonic hg19 OV TCGA-29-1697 2 5'UTR-CDS Intra-chr q21.32 q21.32 Seq+ 8660 ChimerSeq FusionScan TCGA_RNA-Seq GNAI3-PTAFR GNAI3 chr1 110091460 + PTAFR chr1 28477570 - Exonic hg19 OV TCGA-29-1697 2 CDS-5'UTR Intra-chr p13.3 p35.3 8661 ChimerSeq FusionScan TCGA_RNA-Seq EPN1-CCDC106 EPN1 chr19 56190221 + CCDC106 chr19 56160570 + Exonic hg19 OV TCGA-29-1697 2 Out-of-Frame Intra-chr q13.42 q13.42 Seq+ 8662 ChimerSeq FusionScan TCGA_RNA-Seq ENAH-TMEM63A ENAH chr1 225754950 - TMEM63A chr1 226034914 - Exonic hg19 OV TCGA-29-1697 2 In-Frame Intra-chr q42.12 q42.12 8663 ChimerSeq FusionScan TCGA_RNA-Seq EIF3J-C21orf59 EIF3J chr15 44829625 + C21orf59 chr21 33974283 - Exonic hg19 OV TCGA-29-1697 2 In-Frame Inter-chr q21.1 q22.11 8664 ChimerSeq FusionScan TCGA_RNA-Seq RFX5-POGZ RFX5 chr1 151316672 - POGZ chr1 151414681 - Exonic hg19 OV TCGA-29-1697 2 CDS-5'UTR Intra-chr q21.3 Transcription factor q21.3 Seq+ 8665 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT6 NDUFA11 chr19 5896463 - FUT6 chr19 5832590 - Exonic hg19 OV TCGA-29-1697 2 CDS-5'UTR Intra-chr p13.3 p13.3 8666 ChimerSeq FusionScan TCGA_RNA-Seq ASNA1-RLN3 ASNA1 chr19 12849472 + RLN3 chr19 14141521 + Exonic hg19 OV TCGA-25-1319 16 Out-of-Frame Intra-chr p13.13 p13.12 Seq+ 8667 ChimerSeq FusionScan TCGA_RNA-Seq ZNF791-RNASEH2A ZNF791 chr19 12721896 + RNASEH2A chr19 12917821 + Exonic hg19 OV TCGA-25-1319 4 Out-of-Frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 8668 ChimerSeq FusionScan TCGA_RNA-Seq HIVEP3-FOXO3 HIVEP3 chr1 42094419 - FOXO3 chr6 108984657 + Exonic hg19 OV TCGA-25-1319 3 5'UTR-CDS Inter-chr p34.2 Tumor suppressor gene Transcription factor q21 Oncogene Tumor suppressor gene Transcription factor 8669 ChimerSeq FusionScan TCGA_RNA-Seq DNAJB1-MED26 DNAJB1 chr19 14627277 - MED26 chr19 16689220 - Exonic hg19 OV TCGA-25-1319 2 In-Frame Intra-chr p13.12 Tumor suppressor gene p13.11 Seq+ 8670 ChimerSeq FusionScan TCGA_RNA-Seq ILVBL-TECR ILVBL chr19 15226962 - TECR chr19 14673336 + Exonic hg19 OV TCGA-25-1319 2 Out-of-Frame Intra-chr p13.12 p13.12 Seq+ 8671 ChimerSeq FusionScan TCGA_RNA-Seq NCK2-ACTR3 NCK2 chr2 106433070 + ACTR3 chr2 114670748 + Exonic hg19 OV TCGA-25-1319 2 5'UTR-CDS Intra-chr q12.2 q14.1 Seq+ 8672 ChimerSeq FusionScan TCGA_RNA-Seq IFI27-QTRT1 IFI27 chr14 94577143 + QTRT1 chr19 10812625 + Exonic hg19 OV TCGA-25-1319 2 5'UTR-CDS Inter-chr q32.12 p13.2 8673 ChimerSeq FusionScan TCGA_RNA-Seq RBBP4-HIVEP3 RBBP4 chr1 33138502 + HIVEP3 chr1 42094618 - Exonic hg19 OV TCGA-25-1319 2 CDS-5'UTR Intra-chr p35.1 p34.2 Tumor suppressor gene Transcription factor Seq+ 8674 ChimerSeq FusionScan TCGA_RNA-Seq TATDN1-RNF139 TATDN1 chr8 125551265 - RNF139 chr8 125498071 + Exonic hg19 OV TCGA-25-1319 2 In-Frame Intra-chr q24.13 q24.13 8675 ChimerSeq FusionScan TCGA_RNA-Seq HDAC3-DIAPH1 HDAC3 chr5 141004774 - DIAPH1 chr5 140967817 - Exonic hg19 OV TCGA-25-1319 2 Out-of-Frame Intra-chr q31.3 Tumor suppressor gene q31.3 8676 ChimerSeq FusionScan TCGA_RNA-Seq ZNF684-CPA6 ZNF684 chr1 40998853 + CPA6 chr8 68536486 - Exonic hg19 OV TCGA-25-1319 2 Out-of-Frame Inter-chr p34.2 Transcription factor q13.2 Seq+ 8677 ChimerSeq FusionScan TCGA_RNA-Seq LUZP1-CASP6 LUZP1 chr1 23495258 - CASP6 chr4 110619498 - Exonic hg19 OV TCGA-25-1319 2 5'UTR-CDS Inter-chr p36.12 q25 8678 ChimerSeq FusionScan TCGA_RNA-Seq COL1A1-SCARA3 COL1A1 chr17 48264375 - SCARA3 chr8 27528416 + Exonic hg19 OV TCGA-24-0975 2 Out-of-Frame Inter-chr q21.33 Oncogene p21.1 8679 ChimerSeq FusionScan TCGA_RNA-Seq NCL-CLU NCL chr2 232326250 - CLU chr8 27464041 - Exonic hg19 OV TCGA-24-0975 2 Out-of-Frame Inter-chr q37.1 p21.1 Tumor suppressor gene 8680 ChimerSeq FusionScan TCGA_RNA-Seq FN1-SEC31A FN1 chr2 216248742 - SEC31A chr4 83750211 - Exonic hg19 OV TCGA-24-0975 2 In-Frame Inter-chr q35 Oncogene q21.22 8681 ChimerSeq FusionScan TCGA_RNA-Seq XPO1-USP34 XPO1 chr2 61753554 - USP34 chr2 61434021 - Exonic hg19 OV TCGA-24-1422 11 In-Frame Intra-chr p15 Oncogene p15 Seq+ 8682 ChimerSeq FusionScan TCGA_RNA-Seq RHBDL2-FAM151A RHBDL2 chr1 39381233 - FAM151A chr1 55075614 - Exonic hg19 OV TCGA-24-1422 4 Out-of-Frame Intra-chr p34.3 p32.3 8683 ChimerSeq FusionScan TCGA_RNA-Seq CRHR1-KANSL1 CRHR1 chr17 43699407 + KANSL1 chr17 44249598 - Exonic hg19 OV TCGA-24-1422 2 5'UTR-5'UTR Intra-chr q21.31 Pub 8684 ChimerSeq FusionScan TCGA_RNA-Seq KIDINS220-S100A4 KIDINS220 chr2 8977609 - S100A4 chr1 153517285 - Exonic hg19 OV TCGA-13-0888 2 5'UTR-5'UTR Inter-chr p25.1 q21.3 8685 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1804-EFHC1 KIAA1804 chr1 233489701 + EFHC1 chr6 52343834 + Exonic hg19 OV TCGA-13-0888 2 Out-of-Frame Inter-chr p12.2 8686 ChimerSeq FusionScan TCGA_RNA-Seq SEMA4B-ZNF710 SEMA4B chr15 90728313 + ZNF710 chr15 90616302 + Exonic hg19 OV TCGA-13-0888 2 5'UTR-CDS Intra-chr q26.1 q26.1 Transcription factor Seq+ 8687 ChimerSeq FusionScan TCGA_RNA-Seq LIMA1-RGL1 LIMA1 chr12 50677202 - RGL1 chr1 183849749 + Exonic hg19 OV TCGA-13-0888 2 5'UTR-CDS Inter-chr q13.12 Tumor suppressor gene q25.3 Seq+ 8688 ChimerSeq FusionScan TCGA_RNA-Seq STAU2-MFSD10 STAU2 chr8 74659017 - MFSD10 chr4 2935671 - Exonic hg19 OV TCGA-13-0899 3 5'UTR-5'UTR Inter-chr q21.11 p16.3 8689 ChimerSeq FusionScan TCGA_RNA-Seq FBXL7-RPL30 FBXL7 chr5 15616181 + RPL30 chr8 99054078 - Exonic hg19 OV TCGA-13-0899 3 In-Frame Inter-chr p15.1 q22.2 8690 ChimerSeq FusionScan TCGA_RNA-Seq MED28-NCAPG MED28 chr4 17621590 + NCAPG chr4 17842229 + Exonic hg19 OV TCGA-13-0899 3 In-Frame Intra-chr p15.32 p15.31 8691 ChimerSeq FusionScan TCGA_RNA-Seq TP73-CEP104 TP73 chr1 3599744 + CEP104 chr1 3740126 - Exonic hg19 OV TCGA-13-0899 2 In-Frame Intra-chr p36.32 Tumor suppressor gene Transcription factor p36.32 Seq+ 8692 ChimerSeq FusionScan TCGA_RNA-Seq PES1-CD97 PES1 chr22 30976557 - CD97 chr19 14517680 + Exonic hg19 OV TCGA-13-0899 2 Out-of-Frame Inter-chr q12.2 8693 ChimerSeq FusionScan TCGA_RNA-Seq RHPN2-GPATCH1 RHPN2 chr19 33535154 - GPATCH1 chr19 33621035 + Exonic hg19 OV TCGA-13-0899 2 In-Frame Intra-chr q13.11 q13.11 8694 ChimerSeq FusionScan TCGA_RNA-Seq PTGDS-MFSD10 PTGDS chr9 139872144 + MFSD10 chr4 2935671 - Exonic hg19 OV TCGA-13-0899 2 CDS-5'UTR Inter-chr q34.3 p16.3 Seq+ 8695 ChimerSeq FusionScan TCGA_RNA-Seq RSF1-PAK1 RSF1 chr11 77475642 - PAK1 chr11 77070062 - Exonic hg19 OV TCGA-13-0899 2 In-Frame Intra-chr q14.1 q14.1 STE:STE20 Seq+ 8696 ChimerSeq FusionScan TCGA_RNA-Seq LUC7L-NME4 LUC7L chr16 279277 - NME4 chr16 448989 + Exonic hg19 OV TCGA-13-0899 2 In-Frame Intra-chr p13.3 p13.3 8697 ChimerSeq FusionScan TCGA_RNA-Seq MOB4-HSPE1 MOB4 chr2 198380870 + HSPE1 chr2 198367762 + Exonic hg19 OV TCGA-13-0899 2 In-Frame Intra-chr q33.1 q33.1 8698 ChimerSeq FusionScan TCGA_RNA-Seq BNIP2-ANXA2 BNIP2 chr15 59981333 - ANXA2 chr15 60678285 - Exonic hg19 OV TCGA-13-0899 2 Out-of-Frame Intra-chr q22.2 q22.2 8699 ChimerSeq FusionScan TCGA_RNA-Seq FDFT1-MTX2 FDFT1 chr8 11660440 + MTX2 chr2 177161587 + Exonic hg19 OV TCGA-13-0899 2 Out-of-Frame Inter-chr p23.1 q31.1 8700 ChimerSeq FusionScan TCGA_RNA-Seq MACROD2-TASP1 MACROD2 chr20 13983050 + TASP1 chr20 13415801 - Exonic hg19 OV TCGA-13-0899 2 In-Frame Intra-chr p12.1 p12.1 Seq+ 8701 ChimerSeq FusionScan TCGA_RNA-Seq ATN1-PRDX6 ATN1 chr12 7043741 + PRDX6 chr1 173446485 + Exonic hg19 OV TCGA-13-0899 2 CDS-5'UTR Inter-chr p13.31 q25.1 8702 ChimerSeq FusionScan TCGA_RNA-Seq TYMS-USP14 TYMS chr18 671451 + USP14 chr18 209970 + Exonic hg19 OV TCGA-13-0899 2 3'UTR-CDS Intra-chr p11.32 p11.32 8703 ChimerSeq FusionScan TCGA_RNA-Seq SMARCC1-DAD1 SMARCC1 chr3 47814306 - DAD1 chr14 23044133 - Exonic hg19 OV TCGA-13-1501 7 Out-of-Frame Inter-chr p21.31 Tumor suppressor gene q11.2 Seq+ 8704 ChimerSeq FusionScan TCGA_RNA-Seq TRPM4-ELOF1 TRPM4 chr19 49661147 + ELOF1 chr19 11665180 - Exonic hg19 OV TCGA-13-1501 5 CDS-5'UTR Intra-chr q13.33 p13.2 Seq+ 8705 ChimerSeq FusionScan TCGA_RNA-Seq EXOC2-GMDS EXOC2 chr6 572519 - GMDS chr6 1742820 - Exonic hg19 OV TCGA-13-1501 2 In-Frame Intra-chr p25.3 p25.3 Seq+ 8706 ChimerSeq FusionScan TCGA_RNA-Seq INADL-EIF3E INADL chr1 62456036 + EIF3E chr8 109241424 - Exonic hg19 OV TCGA-13-1501 2 In-Frame Inter-chr q23.1 8707 ChimerSeq FusionScan TCGA_RNA-Seq PSMG4-GMDS PSMG4 chr6 3259430 + GMDS chr6 1742820 - Exonic hg19 OV TCGA-13-1501 2 In-Frame Intra-chr p25.2 p25.3 8708 ChimerSeq FusionScan TCGA_RNA-Seq CHD2-MYH9 CHD2 chr15 93444529 + MYH9 chr22 36701148 - Exonic hg19 OV TCGA-29-1688 2 In-Frame Inter-chr q26.1 q12.3 Oncogene Tumor suppressor gene 8709 ChimerSeq FusionScan TCGA_RNA-Seq IFI6-PSMA6 IFI6 chr1 27994736 - PSMA6 chr14 35782086 + Exonic hg19 OV TCGA-29-1688 2 In-Frame Inter-chr p35.3 q13.2 8710 ChimerSeq FusionScan TCGA_RNA-Seq DCUN1D2-PTPN1 DCUN1D2 chr13 114144981 - PTPN1 chr20 49195704 + Exonic hg19 OV TCGA-29-1688 2 In-Frame Inter-chr q34 q13.13 Tumor suppressor gene 8711 ChimerSeq FusionScan TCGA_RNA-Seq TRIM33-ABCA4 TRIM33 chr1 115053171 - ABCA4 chr1 94458798 - Exonic hg19 OV TCGA-04-1347 3 Out-of-Frame Intra-chr p13.2 Oncogene p22.1 Seq+ 8712 ChimerSeq FusionScan TCGA_RNA-Seq USP46-SCFD2 USP46 chr4 53525281 - SCFD2 chr4 53787037 - Exonic hg19 OV TCGA-13-0766 2 Out-of-Frame Intra-chr q12 q12 Seq+ 8713 ChimerSeq FusionScan TCGA_RNA-Seq FAM122B-AGXT2L2 FAM122B chrX 133923252 - AGXT2L2 chr5 177641886 - Exonic hg19 OV TCGA-13-0766 2 In-Frame Inter-chr q26.3 8714 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPF-ZNF569 HNRNPF chr10 43904578 - ZNF569 chr19 37956375 - Exonic hg19 OV TCGA-13-0916 2 5'UTR-5'UTR Inter-chr q11.21 q13.12 Transcription factor Seq+ 8715 ChimerSeq FusionScan TCGA_RNA-Seq THRAP3-SH3D21 THRAP3 chr1 36725085 + SH3D21 chr1 36785275 + Exonic hg19 OV TCGA-24-2035 6 5'UTR-CDS Intra-chr p34.3 p34.3 8716 ChimerSeq FusionScan TCGA_RNA-Seq CD58-PEX14 CD58 chr1 117061852 - PEX14 chr1 10678388 + Exonic hg19 OV TCGA-24-2035 2 Out-of-Frame Intra-chr p13.1 p36.22 8717 ChimerSeq FusionScan TCGA_RNA-Seq THRAP3-SH3D21 THRAP3 chr1 36725085 + SH3D21 chr1 36784671 + Exonic hg19 OV TCGA-24-2035 2 5'UTR-CDS Intra-chr p34.3 p34.3 8718 ChimerSeq FusionScan TCGA_RNA-Seq PKN1-MGAT4C PKN1 chr19 14581494 + MGAT4C chr12 86727905 - Exonic hg19 OV TCGA-24-2035 2 CDS-5'UTR Inter-chr p13.12 AGC:PKN 8719 ChimerSeq FusionScan TCGA_RNA-Seq DPY19L4-SNTG1 DPY19L4 chr8 95738669 + SNTG1 chr8 51705230 + Exonic hg19 OV TCGA-24-2035 2 Out-of-Frame Intra-chr q22.1 q11.21 Seq+ 8720 ChimerSeq FusionScan TCGA_RNA-Seq EMID2-ARPC1B EMID2 chr7 101006471 + ARPC1B chr7 98983324 + Exonic hg19 OV TCGA-10-0933 2 CDS-5'UTR Intra-chr q22.1 8721 ChimerSeq FusionScan TCGA_RNA-Seq ADAMTS16-N4BP2L2 ADAMTS16 chr5 5232629 + N4BP2L2 chr13 33101669 - Exonic hg19 OV TCGA-10-0933 2 In-Frame Inter-chr p15.32 q13.1 8722 ChimerSeq FusionScan TCGA_RNA-Seq ZMYND8-SULF2 ZMYND8 chr20 45976599 - SULF2 chr20 46319039 - Exonic hg19 OV TCGA-09-1673 21 Out-of-Frame Intra-chr q13.12 q13.12 Seq+ 8723 ChimerSeq FusionScan TCGA_RNA-Seq C18orf1-IMPA2 C18orf1 chr18 13278187 + IMPA2 chr18 11999052 + Exonic hg19 OV TCGA-09-1673 10 5'UTR-CDS Intra-chr p11.21 Seq+ 8724 ChimerSeq FusionScan TCGA_RNA-Seq KCTD21-NARS2 KCTD21 chr11 77899618 - NARS2 chr11 78154804 - Exonic hg19 OV TCGA-09-1673 8 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 8725 ChimerSeq FusionScan TCGA_RNA-Seq SPECC1L-TMEM62 SPECC1L chr22 24743144 + TMEM62 chr15 43461790 + Exonic hg19 OV TCGA-09-1673 6 Out-of-Frame Inter-chr q11.23 q15.2 Seq+ 8726 ChimerSeq FusionScan TCGA_RNA-Seq PCCA-MBNL2 PCCA chr13 100861717 + MBNL2 chr13 97986529 + Exonic hg19 OV TCGA-09-1673 4 In-Frame Intra-chr q32.3 q32.1 Transcription factor Seq+ 8727 ChimerSeq FusionScan TCGA_RNA-Seq CORO1C-ATXN2 CORO1C chr12 109094899 - ATXN2 chr12 111926584 - Exonic hg19 OV TCGA-09-1673 4 In-Frame Intra-chr q24.11 q24.12 Seq+ 8728 ChimerSeq FusionScan TCGA_RNA-Seq RSBN1L-RHBDD2 RSBN1L chr7 77326372 + RHBDD2 chr7 75511146 + Exonic hg19 OV TCGA-09-1673 3 In-Frame Intra-chr q11.23 q11.23 Seq+ 8729 ChimerSeq FusionScan TCGA_RNA-Seq SPRED3-RFXANK SPRED3 chr19 38885116 + RFXANK chr19 19304747 + Exonic hg19 OV TCGA-09-1673 2 3'UTR-5'UTR Intra-chr q13.2 p13.11 8730 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-LRCH2 RCC1 chr1 28834672 + LRCH2 chrX 114358565 - Exonic hg19 OV TCGA-09-1673 2 5'UTR-CDS Inter-chr p35.3 q23 8731 ChimerSeq FusionScan TCGA_RNA-Seq RALBP1-RAB31 RALBP1 chr18 9475689 + RAB31 chr18 9775274 + Exonic hg19 OV TCGA-09-1673 2 5'UTR-CDS Intra-chr p11.22 p11.22 Seq+ 8732 ChimerSeq FusionScan TCGA_RNA-Seq CCDC122-ENOX1 CCDC122 chr13 44448977 - ENOX1 chr13 44241680 - Exonic hg19 OV TCGA-09-1673 2 5'UTR-5'UTR Intra-chr q14.11 q14.11 Seq+ 8733 ChimerSeq FusionScan TCGA_RNA-Seq BACE2-MLL3 BACE2 chr21 42629253 + MLL3 chr7 151962294 - Exonic hg19 OV TCGA-09-1673 2 In-Frame Inter-chr q22.2 Tumor suppressor gene 8734 ChimerSeq FusionScan TCGA_RNA-Seq CHD6-NCOA5 CHD6 chr20 40246978 - NCOA5 chr20 44691528 - Exonic hg19 OV TCGA-09-1673 2 5'UTR-CDS Intra-chr q12 q13.12 Tumor suppressor gene Seq+ 8735 ChimerSeq FusionScan TCGA_RNA-Seq INTS6-DCBLD2 INTS6 chr13 52025160 - DCBLD2 chr3 98600611 - Exonic hg19 OV TCGA-23-1114 4 Out-of-Frame Inter-chr q14.3 Tumor suppressor gene q12.1 Seq+ 8736 ChimerSeq FusionScan TCGA_RNA-Seq SPRED3-RFXANK SPRED3 chr19 38885116 + RFXANK chr19 19304747 + Exonic hg19 OV TCGA-23-1114 3 3'UTR-5'UTR Intra-chr q13.2 p13.11 8737 ChimerSeq FusionScan TCGA_RNA-Seq RYBP-ROBO2 RYBP chr3 72495646 - ROBO2 chr3 77526564 + Exonic hg19 OV TCGA-23-1114 3 Out-of-Frame Intra-chr p12.3 Seq+ 8738 ChimerSeq FusionScan TCGA_RNA-Seq ORC2-CPEB1 ORC2 chr2 201828212 - CPEB1 chr15 83240282 - Exonic hg19 OV TCGA-23-1114 3 5'UTR-5'UTR Inter-chr q33.1 q25.2 Transcription factor Seq+ 8739 ChimerSeq FusionScan TCGA_RNA-Seq VDAC3-MLL3 VDAC3 chr8 42260979 + MLL3 chr7 151850039 - Exonic hg19 OV TCGA-23-1114 2 In-Frame Inter-chr p11.21 Tumor suppressor gene 8740 ChimerSeq FusionScan TCGA_RNA-Seq RALGAPA2-CNGA1 RALGAPA2 chr20 20656879 - CNGA1 chr4 47951912 - Exonic hg19 OV TCGA-23-1114 2 Out-of-Frame Inter-chr p11.23 p12 8741 ChimerSeq FusionScan TCGA_RNA-Seq CTBP1-SPON2 CTBP1 chr4 1242703 - SPON2 chr4 1173329 - Exonic hg19 OV TCGA-23-1114 2 5'UTR-5'UTR Intra-chr p16.3 p16.3 8742 ChimerSeq FusionScan TCGA_RNA-Seq SCAF8-DIMT1 SCAF8 chr6 155109156 + DIMT1 chr5 61686809 - Exonic hg19 OV TCGA-23-1809 3 In-Frame Inter-chr q25.2 q12.1 8743 ChimerSeq FusionScan TCGA_RNA-Seq SCAF8-DIMT1 SCAF8 chr6 155099179 + DIMT1 chr5 61686809 - Exonic hg19 OV TCGA-23-1809 2 In-Frame Inter-chr q25.2 q12.1 8744 ChimerSeq FusionScan TCGA_RNA-Seq PTGDS-MFSD10 PTGDS chr9 139872144 + MFSD10 chr4 2935671 - Exonic hg19 OV TCGA-23-1809 2 CDS-5'UTR Inter-chr q34.3 p16.3 Seq+ 8745 ChimerSeq FusionScan TCGA_RNA-Seq ANO8-SLC27A1 ANO8 chr19 17443738 - SLC27A1 chr19 17615263 + Exonic hg19 OV TCGA-23-1809 2 In-Frame Intra-chr p13.11 p13.11 8746 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1522-RBBP4 KIAA1522 chr1 33207790 + RBBP4 chr1 33133825 + Exonic hg19 OV TCGA-13-1483 5 In-Frame Intra-chr p35.1 p35.1 Seq+ 8747 ChimerSeq FusionScan TCGA_RNA-Seq ZNF564-GBAS ZNF564 chr19 12662143 - GBAS chr7 56045818 + Exonic hg19 OV TCGA-13-1483 2 Out-of-Frame Inter-chr p13.2 Transcription factor 8748 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R37-CEACAM19 PPP1R37 chr19 45596785 + CEACAM19 chr19 45185838 + Exonic hg19 OV TCGA-OY-A56Q 37 Out-of-Frame Intra-chr q13.32 q13.31 Seq+ 8749 ChimerSeq FusionScan TCGA_RNA-Seq PPP6R3-GNB2L1 PPP6R3 chr11 68287119 + GNB2L1 chr5 180665239 - Exonic hg19 OV TCGA-OY-A56Q 21 5'UTR-CDS Inter-chr q13.2 Tumor suppressor gene Seq+ 8750 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPL-SRRT HNRNPL chr19 39334481 - SRRT chr7 100484940 + Exonic hg19 OV TCGA-OY-A56Q 2 In-Frame Inter-chr q22.1 8751 ChimerSeq FusionScan TCGA_RNA-Seq CROCC-NBPF3 CROCC chr1 17265637 + NBPF3 chr1 21771440 + Exonic hg19 OV TCGA-OY-A56Q 2 CDS-5'UTR Intra-chr p36.13 p36.12 8752 ChimerSeq FusionScan TCGA_RNA-Seq CRYL1-MTCP1NB CRYL1 chr13 21063508 - MTCP1NB chrX 154292308 - Exonic hg19 OV TCGA-OY-A56Q 2 CDS-5'UTR Inter-chr q12.11 8753 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT6 NDUFA11 chr19 5896463 - FUT6 chr19 5832590 - Exonic hg19 OV TCGA-OY-A56Q 2 CDS-5'UTR Intra-chr p13.3 p13.3 8754 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 OV TCGA-OY-A56Q 2 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 8755 ChimerSeq FusionScan TCGA_RNA-Seq IFT46-MYH9 IFT46 chr11 118425962 - MYH9 chr22 36681999 - Exonic hg19 OV TCGA-OY-A56Q 2 Out-of-Frame Inter-chr q23.3 q12.3 Oncogene Tumor suppressor gene 8756 ChimerSeq FusionScan TCGA_RNA-Seq PCMTD1-KLHDC8A PCMTD1 chr8 52811489 - KLHDC8A chr1 205312921 - Exonic hg19 OV TCGA-29-2427 2 5'UTR-5'UTR Inter-chr q11.23 q32.1 Seq+ 8757 ChimerSeq FusionScan TCGA_RNA-Seq E2F5-NDRG1 E2F5 chr8 86089889 + NDRG1 chr8 134276895 - Exonic hg19 OV TCGA-25-2396 2 In-Frame Intra-chr q21.2 Transcription factor q24.22 Tumor suppressor gene 8758 ChimerSeq FusionScan TCGA_RNA-Seq NFIX-CALR NFIX chr19 13136366 + CALR chr19 13050866 + Exonic hg19 OV TCGA-25-2396 2 In-Frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 8759 ChimerSeq FusionScan TCGA_RNA-Seq INPP5A-TIMELESS INPP5A chr10 134351675 + TIMELESS chr12 56815975 - Exonic hg19 OV TCGA-25-2396 2 Out-of-Frame Inter-chr q26.3 q13.3 8760 ChimerSeq FusionScan TCGA_RNA-Seq RAPGEF1-EIF3D RAPGEF1 chr9 134525515 - EIF3D chr22 36907047 - Exonic hg19 OV TCGA-25-2396 2 Out-of-Frame Inter-chr q34.13 q12.3 8761 ChimerSeq FusionScan TCGA_RNA-Seq FKBP8-DAND5 FKBP8 chr19 18654295 - DAND5 chr19 13084202 + Exonic hg19 OV TCGA-13-0800 13 5'UTR-CDS Intra-chr p13.11 p13.13 Seq+ 8762 ChimerSeq FusionScan TCGA_RNA-Seq ZNF227-PDCD5 ZNF227 chr19 44716738 + PDCD5 chr19 33073100 + Exonic hg19 OV TCGA-13-0800 7 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.11 Tumor suppressor gene Seq+ 8763 ChimerSeq FusionScan TCGA_RNA-Seq TNPO2-ASNA1 TNPO2 chr19 12833290 - ASNA1 chr19 12858010 + Exonic hg19 OV TCGA-13-0800 6 5'UTR-CDS Intra-chr p13.13 p13.13 Seq+ 8764 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT6 NDUFA11 chr19 5896463 - FUT6 chr19 5832590 - Exonic hg19 OV TCGA-13-0800 3 CDS-5'UTR Intra-chr p13.3 p13.3 8765 ChimerSeq FusionScan TCGA_RNA-Seq TNPO2-ASNA1 TNPO2 chr19 12834062 - ASNA1 chr19 12858010 + Exonic hg19 OV TCGA-13-0800 2 5'UTR-CDS Intra-chr p13.13 p13.13 Seq+ 8766 ChimerSeq FusionScan TCGA_RNA-Seq AKD1-PDSS2 AKD1 chr6 110012349 - PDSS2 chr6 107595431 - Exonic hg19 OV TCGA-13-0800 2 5'UTR-CDS Intra-chr q21 Tumor suppressor gene 8767 ChimerSeq FusionScan TCGA_RNA-Seq CKS1B-ADAM15 CKS1B chr1 154947280 + ADAM15 chr1 155034720 + Exonic hg19 OV TCGA-13-0800 2 In-Frame Intra-chr q21.3 Oncogene q21.3 8768 ChimerSeq FusionScan TCGA_RNA-Seq IFT172-KRTCAP3 IFT172 chr2 27669126 - KRTCAP3 chr2 27669167 + Exonic hg19 OV TCGA-13-0800 2 CDS-3'UTR Intra-chr p23.3 p23.3 8769 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD11-TBCD ANKRD11 chr16 89484691 - TBCD chr17 80828099 + Exonic hg19 OV TCGA-09-2056 13 5'UTR-CDS Inter-chr q24.3 Seq+ 8770 ChimerSeq FusionScan TCGA_RNA-Seq C11orf51-MUC16 C11orf51 chr11 71821133 - MUC16 chr19 9002673 - Exonic hg19 OV TCGA-09-2056 3 Out-of-Frame Inter-chr p13.2 8771 ChimerSeq FusionScan TCGA_RNA-Seq ZNF787-EPN1 ZNF787 chr19 56614507 - EPN1 chr19 56196761 + Exonic hg19 OV TCGA-09-2056 2 Out-of-Frame Intra-chr q13.43 Transcription factor q13.42 8772 ChimerSeq FusionScan TCGA_RNA-Seq PRRC2C-GFM2 PRRC2C chr1 171454874 + GFM2 chr5 74059591 - Exonic hg19 OV TCGA-09-2056 2 5'UTR-5'UTR Inter-chr q24.3 q13.3 8773 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC11-GNB1 DNAJC11 chr1 6761788 - GNB1 chr1 1756938 - Exonic hg19 OV TCGA-09-2056 2 CDS-5'UTR Intra-chr p36.31 Tumor suppressor gene p36.33 8774 ChimerSeq FusionScan TCGA_RNA-Seq RPL5-SRSF11 RPL5 chr1 93297674 + SRSF11 chr1 70694104 + Exonic hg19 OV TCGA-09-2056 2 Out-of-Frame Intra-chr p22.1 Tumor suppressor gene p31.1 8775 ChimerSeq FusionScan TCGA_RNA-Seq HEXB-UBA6 HEXB chr5 73989529 + UBA6 chr4 68531010 - Exonic hg19 OV TCGA-09-2056 2 In-Frame Inter-chr q13.3 q13.2 8776 ChimerSeq FusionScan TCGA_RNA-Seq COX6A1-CAPZA1 COX6A1 chr12 120876324 + CAPZA1 chr1 113201643 + Exonic hg19 OV TCGA-09-2056 2 In-Frame Inter-chr q24.31 p13.2 8777 ChimerSeq FusionScan TCGA_RNA-Seq PAAF1-ARGLU1 PAAF1 chr11 73602246 + ARGLU1 chr13 107209479 - Exonic hg19 OV TCGA-09-2056 2 In-Frame Inter-chr q13.4 q33.3 8778 ChimerSeq FusionScan TCGA_RNA-Seq SKAP1-WDR1 SKAP1 chr17 46423266 - WDR1 chr4 10117858 - Exonic hg19 OV TCGA-09-2056 2 In-Frame Inter-chr q21.32 p16.1 8779 ChimerSeq FusionScan TCGA_RNA-Seq CAP1-ARL5A CAP1 chr1 40506455 + ARL5A chr2 152671713 - Exonic hg19 OV TCGA-09-2056 2 5'UTR-5'UTR Inter-chr p34.2 q23.3 8780 ChimerSeq FusionScan TCGA_RNA-Seq EEF2-CKS1B EEF2 chr19 3977816 - CKS1B chr1 154947117 + Exonic hg19 OV TCGA-09-2056 2 CDS-5'UTR Inter-chr p13.3 q21.3 Oncogene 8781 ChimerSeq FusionScan TCGA_RNA-Seq GAS6-TFDP1 GAS6 chr13 114566547 - TFDP1 chr13 114265310 + Exonic hg19 OV TCGA-09-2056 2 In-Frame Intra-chr q34 Oncogene q34 Transcription factor 8782 ChimerSeq FusionScan TCGA_RNA-Seq ADD1-FAM193A ADD1 chr4 2845751 + FAM193A chr4 2733501 + Exonic hg19 OV TCGA-29-1693 4 5'UTR-5'UTR Intra-chr p16.3 p16.3 Seq+ 8783 ChimerSeq FusionScan TCGA_RNA-Seq UBE2G1-PELP1 UBE2G1 chr17 4269565 - PELP1 chr17 4580107 - Exonic hg19 OV TCGA-20-1684 22 Out-of-Frame Intra-chr p13.2 p13.2 Seq+ 8784 ChimerSeq FusionScan TCGA_RNA-Seq MYH9-PVALB MYH9 chr22 36783851 - PVALB chr22 37213056 - Exonic hg19 OV TCGA-20-1684 12 5'UTR-5'UTR Intra-chr q12.3 Oncogene Tumor suppressor gene Seq+ 8785 ChimerSeq FusionScan TCGA_RNA-Seq ITCH-CBFA2T2 ITCH chr20 32981687 + CBFA2T2 chr20 32232152 + Exonic hg19 OV TCGA-20-1684 12 Out-of-Frame Intra-chr q11.22 q11.21 Seq+ 8786 ChimerSeq FusionScan TCGA_RNA-Seq ERGIC1-KCNIP1 ERGIC1 chr5 172261436 + KCNIP1 chr5 170145761 + Exonic hg19 OV TCGA-20-1684 9 Out-of-Frame Intra-chr q35.1 q35.1 Seq+ 8787 ChimerSeq FusionScan TCGA_RNA-Seq CACNA2D3-DAP3 CACNA2D3 chr3 54676268 + DAP3 chr1 155707947 + Exonic hg19 OV TCGA-20-1684 7 Out-of-Frame Inter-chr p21.1 Tumor suppressor gene q22 Seq+ 8788 ChimerSeq FusionScan TCGA_RNA-Seq GLG1-CFDP1 GLG1 chr16 74501653 - CFDP1 chr16 75339080 - Exonic hg19 OV TCGA-20-1684 6 Out-of-Frame Intra-chr q23.1 q23.1 Seq+ 8789 ChimerSeq FusionScan TCGA_RNA-Seq C9orf3-HIATL1 C9orf3 chr9 97843062 + HIATL1 chr9 97191470 + Exonic hg19 OV TCGA-20-1684 6 In-Frame Intra-chr q22.32 Seq+ 8790 ChimerSeq FusionScan TCGA_RNA-Seq C9orf3-HIATL1 C9orf3 chr9 97845001 + HIATL1 chr9 97191470 + Exonic hg19 OV TCGA-20-1684 6 3'UTR-CDS Intra-chr q22.32 Seq+ 8791 ChimerSeq FusionScan TCGA_RNA-Seq PSMF1-ABRA PSMF1 chr20 1099545 + ABRA chr8 107773742 - Exonic hg19 OV TCGA-20-1684 4 Out-of-Frame Inter-chr p13 q23.1 Seq+ 8792 ChimerSeq FusionScan TCGA_RNA-Seq RSF1-KCTD21 RSF1 chr11 77531573 - KCTD21 chr11 77885629 - Exonic hg19 OV TCGA-20-1684 3 CDS-5'UTR Intra-chr q14.1 q14.1 Seq+ 8793 ChimerSeq FusionScan TCGA_RNA-Seq SYNGAP1-NUDT3 SYNGAP1 chr6 33388108 + NUDT3 chr6 34309749 - Exonic hg19 OV TCGA-20-1684 3 3'UTR-CDS Intra-chr p21.31 8794 ChimerSeq FusionScan TCGA_RNA-Seq LDLR-DNM2 LDLR chr19 11218190 + DNM2 chr19 10935732 + Exonic hg19 OV TCGA-20-1684 3 Out-of-Frame Intra-chr p13.2 p13.2 Seq+ 8795 ChimerSeq FusionScan TCGA_RNA-Seq ATG4C-NFIA ATG4C chr1 63270926 + NFIA chr1 61798183 + Exonic hg19 OV TCGA-20-1684 3 In-Frame Intra-chr p31.3 p31.3 Transcription factor Seq+ 8796 ChimerSeq FusionScan TCGA_RNA-Seq AKAP13-FAM108C1 AKAP13 chr15 86028984 + FAM108C1 chr15 81041853 + Exonic hg19 OV TCGA-20-1684 2 Out-of-Frame Intra-chr q25.3 8797 ChimerSeq FusionScan TCGA_RNA-Seq SEPN1-RBMX SEPN1 chr1 26138370 + RBMX chrX 135956611 - Exonic hg19 OV TCGA-20-1684 2 Out-of-Frame Inter-chr q26.3 Tumor suppressor gene 8798 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD26-MKX ANKRD26 chr10 27371731 - MKX chr10 27964483 - Exonic hg19 OV TCGA-20-1684 2 Out-of-Frame Intra-chr p12.1 p12.1 Transcription factor 8799 ChimerSeq FusionScan TCGA_RNA-Seq DYNC2H1-YAP1 DYNC2H1 chr11 103153814 + YAP1 chr11 102033186 + Exonic hg19 OV TCGA-20-1684 2 Out-of-Frame Intra-chr q22.3 q22.1 Tumor suppressor gene Seq+ 8800 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-FAM192A RCC1 chr1 28834672 + FAM192A chr16 57207781 - Exonic hg19 OV TCGA-20-1684 2 5'UTR-5'UTR Inter-chr p35.3 q13 8801 ChimerSeq FusionScan TCGA_RNA-Seq MRPS27-GNAI2 MRPS27 chr5 71609907 - GNAI2 chr3 50289531 + Exonic hg19 OV TCGA-20-1684 2 In-Frame Inter-chr q13.2 p21.31 8802 ChimerSeq FusionScan TCGA_RNA-Seq ZNF589-CLIP4 ZNF589 chr3 48302429 + CLIP4 chr2 29397238 + Exonic hg19 OV TCGA-20-1684 2 In-Frame Inter-chr p21.31 Transcription factor p23.2 8803 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 OV TCGA-20-1684 2 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 8804 ChimerSeq FusionScan TCGA_RNA-Seq MAP4K5-TIA1 MAP4K5 chr14 50906730 - TIA1 chr2 70443631 - Exonic hg19 OV TCGA-20-1684 2 In-Frame Inter-chr q22.1 p13.3 8805 ChimerSeq FusionScan TCGA_RNA-Seq FOXJ3-LRRC41 FOXJ3 chr1 42693553 - LRRC41 chr1 46764042 - Exonic hg19 OV TCGA-20-1684 2 Out-of-Frame Intra-chr p34.2 Transcription factor p33 Seq+ 8806 ChimerSeq FusionScan TCGA_RNA-Seq WAC-BAMBI WAC chr10 28884970 + BAMBI chr10 28970186 + Exonic hg19 OV TCGA-25-1634 3 In-Frame Intra-chr p12.1 p12.1 8807 ChimerSeq FusionScan TCGA_RNA-Seq WAC-BAMBI WAC chr10 28879761 + BAMBI chr10 28970186 + Exonic hg19 OV TCGA-25-1634 3 In-Frame Intra-chr p12.1 p12.1 8808 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R2A-ZDHHC2 PPP2R2A chr8 26151256 + ZDHHC2 chr8 17074680 + Exonic hg19 OV TCGA-25-1632 13 In-Frame Intra-chr p21.2 p22 Tumor suppressor gene Seq+ 8809 ChimerSeq FusionScan TCGA_RNA-Seq PIN4-LPCAT2 PIN4 chrX 71401678 + LPCAT2 chr16 55579646 + Exonic hg19 OV TCGA-25-1632 8 Out-of-Frame Inter-chr q13.1 q12.2 Seq+ 8810 ChimerSeq FusionScan TCGA_RNA-Seq NPAS3-RB1 NPAS3 chr14 33408572 + RB1 chr13 49039133 + Exonic hg19 OV TCGA-25-1632 6 Out-of-Frame Inter-chr q13.1 Transcription factor q14.2 Oncogene Tumor suppressor gene Seq+ 8811 ChimerSeq FusionScan TCGA_RNA-Seq ANKFY1-SPINT2 ANKFY1 chr17 4077203 - SPINT2 chr19 38774266 + Exonic hg19 OV TCGA-25-1632 5 In-Frame Inter-chr p13.2 q13.2 Tumor suppressor gene Seq+ 8812 ChimerSeq FusionScan TCGA_RNA-Seq CCNF-ATP6V0C CCNF chr16 2499916 + ATP6V0C chr16 2569218 + Exonic hg19 OV TCGA-25-1632 2 Out-of-Frame Intra-chr p13.3 p13.3 8813 ChimerSeq FusionScan TCGA_RNA-Seq PRKCI-SAMD7 PRKCI chr3 169940558 + SAMD7 chr3 169637245 + Exonic hg19 OV TCGA-25-1632 2 CDS-5'UTR Intra-chr q26.2 q26.2 Seq+ 8814 ChimerSeq FusionScan TCGA_RNA-Seq AIDA-VAMP5 AIDA chr1 222876489 - VAMP5 chr2 85818847 + Exonic hg19 OV TCGA-25-1632 2 In-Frame Inter-chr q41 p11.2 8815 ChimerSeq FusionScan TCGA_RNA-Seq LUC7L-DOK5 LUC7L chr16 242925 - DOK5 chr20 53226926 + Exonic hg19 OV TCGA-25-1632 2 In-Frame Inter-chr p13.3 q13.2 8816 ChimerSeq FusionScan TCGA_RNA-Seq RBPJ-SORCS2 RBPJ chr4 26322670 + SORCS2 chr4 7398014 + Exonic hg19 OV TCGA-25-1632 2 Out-of-Frame Intra-chr p15.2 Transcription factor p16.1 8817 ChimerSeq FusionScan TCGA_RNA-Seq STK3-NIPAL2 STK3 chr8 99538969 - NIPAL2 chr8 99224729 - Exonic hg19 OV TCGA-25-1632 2 In-Frame Intra-chr q22.2 q22.2 Seq+ 8818 ChimerSeq FusionScan TCGA_RNA-Seq FAM59A-DNAH9 FAM59A chr18 29972857 - DNAH9 chr17 11772450 + Exonic hg19 OV TCGA-24-2036 2 Out-of-Frame Inter-chr p12 8819 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT6 NDUFA11 chr19 5896463 - FUT6 chr19 5832590 - Exonic hg19 OV TCGA-24-2036 2 CDS-5'UTR Intra-chr p13.3 p13.3 8820 ChimerSeq FusionScan TCGA_RNA-Seq TMEM135-MIPEP TMEM135 chr11 86749228 + MIPEP chr13 24304584 - Exonic hg19 OV TCGA-24-1556 14 Out-of-Frame Inter-chr q14.2 q12.12 Seq+ 8821 ChimerSeq FusionScan TCGA_RNA-Seq SMARCA4-DNM2 SMARCA4 chr19 11138626 + DNM2 chr19 10887793 + Exonic hg19 OV TCGA-24-1556 8 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 8822 ChimerSeq FusionScan TCGA_RNA-Seq MACF1-CMTM4 MACF1 chr1 39854330 + CMTM4 chr16 66670484 - Exonic hg19 OV TCGA-24-1556 5 In-Frame Inter-chr p34.3 q22.1 Seq+ 8823 ChimerSeq FusionScan TCGA_RNA-Seq MAST4-DOCK2 MAST4 chr5 65892846 + DOCK2 chr5 169445963 + Exonic hg19 OV TCGA-24-1556 3 Out-of-Frame Intra-chr q12.3 AGC:MAST q35.1 8824 ChimerSeq FusionScan TCGA_RNA-Seq ATP6V1H-FAM150A ATP6V1H chr8 54656136 - FAM150A chr8 53447160 - Exonic hg19 OV TCGA-24-1556 2 CDS-3'UTR Intra-chr q11.23 Seq+ 8825 ChimerSeq FusionScan TCGA_RNA-Seq ZNF652-YAP1 ZNF652 chr17 47439270 - YAP1 chr11 102056748 + Exonic hg19 OV TCGA-24-1556 2 5'UTR-CDS Inter-chr q21.33 Transcription factor q22.1 Tumor suppressor gene 8826 ChimerSeq FusionScan TCGA_RNA-Seq TIMM17B-PQBP1 TIMM17B chrX 48755349 - PQBP1 chrX 48755212 + Exonic hg19 OV TCGA-24-1556 2 5'UTR-5'UTR Intra-chr p11.23 p11.23 Seq+ 8827 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1598-YTHDF1 KIAA1598 chr10 118764532 - YTHDF1 chr20 61828086 - Exonic hg19 OV TCGA-24-1556 2 Out-of-Frame Inter-chr q13.33 Seq+ 8828 ChimerSeq FusionScan TCGA_RNA-Seq DHX30-ANKLE2 DHX30 chr3 47860754 + ANKLE2 chr12 133331719 - Exonic hg19 OV TCGA-24-1556 2 In-Frame Inter-chr p21.31 q24.33 8829 ChimerSeq FusionScan TCGA_RNA-Seq TMEFF1-ERP44 TMEFF1 chr9 103279053 + ERP44 chr9 102747351 - Exonic hg19 OV TCGA-24-1556 2 In-Frame Intra-chr q31.1 Tumor suppressor gene q31.1 8830 ChimerSeq FusionScan TCGA_RNA-Seq RHPN2-CEP89 RHPN2 chr19 33555689 - CEP89 chr19 33430791 - Exonic hg19 OV TCGA-24-1556 2 Out-of-Frame Intra-chr q13.11 q13.11 8831 ChimerSeq FusionScan TCGA_RNA-Seq MACROD1-RBM39 MACROD1 chr11 63918710 - RBM39 chr20 34304727 - Exonic hg19 OV TCGA-24-1556 2 Out-of-Frame Inter-chr q13.1 q11.22 8832 ChimerSeq FusionScan TCGA_RNA-Seq ROMO1-NFS1 ROMO1 chr20 34287685 + NFS1 chr20 34269903 - Exonic hg19 OV TCGA-61-1741 7 Out-of-Frame Intra-chr q11.22 q11.22 Seq+ 8833 ChimerSeq FusionScan TCGA_RNA-Seq UQCC-MMP24 UQCC chr20 33894468 - MMP24 chr20 33834642 + Exonic hg19 OV TCGA-61-1741 2 In-Frame Intra-chr q11.22 8834 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT6 NDUFA11 chr19 5896463 - FUT6 chr19 5832590 - Exonic hg19 OV TCGA-61-1741 2 CDS-5'UTR Intra-chr p13.3 p13.3 8835 ChimerSeq FusionScan TCGA_RNA-Seq USF2-LEPREL1 USF2 chr19 35762044 + LEPREL1 chr3 189713231 - Exonic hg19 OV TCGA-61-1741 2 Out-of-Frame Inter-chr q13.12 Transcription factor Seq+ 8836 ChimerSeq FusionScan TCGA_RNA-Seq CCDC9-SAE1 CCDC9 chr19 47759866 + SAE1 chr19 47673074 + Exonic hg19 OV TCGA-24-1467 5 5'UTR-5'UTR Intra-chr q13.32 q13.32 Seq+ 8837 ChimerSeq FusionScan TCGA_RNA-Seq SCAP-SLC25A20 SCAP chr3 47517288 - SLC25A20 chr3 48929505 - Exonic hg19 OV TCGA-24-1467 5 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 8838 ChimerSeq FusionScan TCGA_RNA-Seq SKAP1-ZNF74 SKAP1 chr17 46474041 - ZNF74 chr22 20754921 + Exonic hg19 OV TCGA-24-1467 5 Out-of-Frame Inter-chr q21.32 q11.21 Transcription factor Seq+ 8839 ChimerSeq FusionScan TCGA_RNA-Seq CCDC57-RAB40B CCDC57 chr17 80146094 - RAB40B chr17 80622432 - Exonic hg19 OV TCGA-24-1467 3 Out-of-Frame Intra-chr q25.3 q25.3 Seq+ 8840 ChimerSeq FusionScan TCGA_RNA-Seq TAF2-DEPTOR TAF2 chr8 120843916 - DEPTOR chr8 120940639 + Exonic hg19 OV TCGA-24-1467 3 Out-of-Frame Intra-chr q24.12 q24.12 Seq+ 8841 ChimerSeq FusionScan TCGA_RNA-Seq TAF2-DEPTOR TAF2 chr8 120831585 - DEPTOR chr8 120940639 + Exonic hg19 OV TCGA-24-1467 2 In-Frame Intra-chr q24.12 q24.12 Seq+ 8842 ChimerSeq FusionScan TCGA_RNA-Seq HELZ-SRSF4 HELZ chr17 65186272 - SRSF4 chr1 29481422 - Exonic hg19 OV TCGA-24-1467 2 In-Frame Inter-chr q24.2 p35.3 8843 ChimerSeq FusionScan TCGA_RNA-Seq SP3-GPR155 SP3 chr2 174819600 - GPR155 chr2 175318569 - Exonic hg19 OV TCGA-09-1662 8 In-Frame Intra-chr q31.1 Transcription factor q31.1 Seq+ 8844 ChimerSeq FusionScan TCGA_RNA-Seq SPRED3-RFXANK SPRED3 chr19 38885116 + RFXANK chr19 19304747 + Exonic hg19 OV TCGA-09-1662 4 3'UTR-5'UTR Intra-chr q13.2 p13.11 8845 ChimerSeq FusionScan TCGA_RNA-Seq HK2-ONECUT3 HK2 chr2 75101576 + ONECUT3 chr19 1775151 + Exonic hg19 OV TCGA-09-1662 3 Out-of-Frame Inter-chr p12 p13.3 Transcription factor Seq+ 8846 ChimerSeq FusionScan TCGA_RNA-Seq CUL4B-XPO6 CUL4B chrX 119672514 - XPO6 chr16 28109960 - Exonic hg19 OV TCGA-09-1662 2 Out-of-Frame Inter-chr q24 p12.1 8847 ChimerSeq FusionScan TCGA_RNA-Seq STYX-C14orf166 STYX chr14 53197249 + C14orf166 chr14 52458034 + Exonic hg19 OV TCGA-09-1662 2 Out-of-Frame Intra-chr q22.1 q22.1 Seq+ 8848 ChimerSeq FusionScan TCGA_RNA-Seq MTX2-PSPC1 MTX2 chr2 177135147 + PSPC1 chr13 20251963 - Exonic hg19 OV TCGA-09-1662 2 5'UTR-3'UTR Inter-chr q31.1 q12.11 8849 ChimerSeq FusionScan TCGA_RNA-Seq TIMM17B-PQBP1 TIMM17B chrX 48755349 - PQBP1 chrX 48755212 + Exonic hg19 OV TCGA-09-1662 2 5'UTR-5'UTR Intra-chr p11.23 p11.23 Seq+ 8850 ChimerSeq FusionScan TCGA_RNA-Seq NAP1L4-SLC22A18AS NAP1L4 chr11 2991032 - SLC22A18AS chr11 2909865 - Exonic hg19 OV TCGA-24-1565 11 In-Frame Intra-chr 8851 ChimerSeq FusionScan TCGA_RNA-Seq SPRED3-RFXANK SPRED3 chr19 38885116 + RFXANK chr19 19304747 + Exonic hg19 OV TCGA-24-1565 2 3'UTR-5'UTR Intra-chr q13.2 p13.11 8852 ChimerSeq FusionScan TCGA_RNA-Seq EEF1D-LMF1 EEF1D chr8 144679517 - LMF1 chr16 943072 - Exonic hg19 OV TCGA-24-1565 2 5'UTR-CDS Inter-chr p13.3 8853 ChimerSeq FusionScan TCGA_RNA-Seq GNAZ-MIF GNAZ chr22 23412756 + MIF chr22 24236958 + Exonic hg19 OV TCGA-24-2019 20 5'UTR-CDS Intra-chr q11.22 q11.23 Tumor suppressor gene Seq+ 8854 ChimerSeq FusionScan TCGA_RNA-Seq ST3GAL2-CATSPERB ST3GAL2 chr16 70472851 - CATSPERB chr14 92047451 - Exonic hg19 OV TCGA-24-2019 9 5'UTR-CDS Inter-chr q22.1 Seq+ 8855 ChimerSeq FusionScan TCGA_RNA-Seq ZDHHC21-PSIP1 ZDHHC21 chr9 14680030 - PSIP1 chr9 15472748 - Exonic hg19 OV TCGA-24-2019 6 5'UTR-CDS Intra-chr p22.3 p22.3 Oncogene Seq+ 8856 ChimerSeq FusionScan TCGA_RNA-Seq NXN-WWOX NXN chr17 882558 - WWOX chr16 79245504 + Exonic hg19 OV TCGA-24-2019 5 In-Frame Inter-chr p13.3 q23.1 Tumor suppressor gene Seq+ 8857 ChimerSeq FusionScan TCGA_RNA-Seq PRUNE-VPS45 PRUNE chr1 151001420 + VPS45 chr1 150116886 + Exonic hg19 OV TCGA-24-2019 3 Out-of-Frame Intra-chr q21.2 Seq+ 8858 ChimerSeq FusionScan TCGA_RNA-Seq MSH2-TTC7A MSH2 chr2 47643568 + TTC7A chr2 47287907 + Exonic hg19 OV TCGA-24-2019 3 Out-of-Frame Intra-chr p21 Oncogene Tumor suppressor gene p21 Seq+ 8859 ChimerSeq FusionScan TCGA_RNA-Seq ZNF644-LPHN2 ZNF644 chr1 91487546 - LPHN2 chr1 82421560 + Exonic hg19 OV TCGA-24-2019 2 5'UTR-CDS Intra-chr p22.2 Transcription factor 8860 ChimerSeq FusionScan TCGA_RNA-Seq LIMK2-MTMR3 LIMK2 chr22 31621805 + MTMR3 chr22 30353024 + Exonic hg19 OV TCGA-24-2019 2 CDS-5'UTR Intra-chr q12.2 TKL:LISK q12.2 8861 ChimerSeq FusionScan TCGA_RNA-Seq MLST8-C16orf79 MLST8 chr16 2259418 + C16orf79 chr16 2259457 - Exonic hg19 OV TCGA-24-2019 2 3'UTR-CDS Intra-chr p13.3 8862 ChimerSeq FusionScan TCGA_RNA-Seq SDCCAG8-GNAS SDCCAG8 chr1 243419542 + GNAS chr20 57470666 + Exonic hg19 OV TCGA-24-2019 2 In-Frame Inter-chr q13.32 Oncogene 8863 ChimerSeq FusionScan TCGA_RNA-Seq PET112-FAM160A1 PET112 chr4 152622480 - FAM160A1 chr4 152498601 + Exonic hg19 OV TCGA-24-2019 2 In-Frame Intra-chr q31.3 8864 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0564-LSM5 KIAA0564 chr13 42361572 - LSM5 chr7 32527369 - Exonic hg19 OV TCGA-24-2019 2 Out-of-Frame Inter-chr p14.3 8865 ChimerSeq FusionScan TCGA_RNA-Seq EZH2-ZNF746 EZH2 chr7 148543561 - ZNF746 chr7 149191594 - Exonic hg19 OV TCGA-24-2019 2 In-Frame Intra-chr q36.1 Oncogene Tumor suppressor gene q36.1 Transcription factor 8866 ChimerSeq FusionScan TCGA_RNA-Seq CCBP2-ZNF662 CCBP2 chr3 42861203 + ZNF662 chr3 42950287 + Exonic hg19 OV TCGA-24-2019 2 5'UTR-CDS Intra-chr p22.1 Transcription factor 8867 ChimerSeq FusionScan TCGA_RNA-Seq DZIP1-GTF2I DZIP1 chr13 96236989 - GTF2I chr7 74171151 + Exonic hg19 OV TCGA-24-2019 2 In-Frame Inter-chr q32.1 Transcription factor q11.23 Transcription factor 8868 ChimerSeq FusionScan TCGA_RNA-Seq DCTN6-CCDC23 DCTN6 chr8 30021691 + CCDC23 chr1 43282251 - Exonic hg19 OV TCGA-24-2019 2 CDS-5'UTR Inter-chr p12 8869 ChimerSeq FusionScan TCGA_RNA-Seq LAMP2-SLC25A43 LAMP2 chrX 119575584 - SLC25A43 chrX 118585971 + Exonic hg19 OV TCGA-24-2019 2 Out-of-Frame Intra-chr q24 q24 8870 ChimerSeq FusionScan TCGA_RNA-Seq MMP17-NOC4L MMP17 chr12 132313198 + NOC4L chr12 132635525 + Exonic hg19 OV TCGA-24-2019 2 Out-of-Frame Intra-chr q24.33 q24.33 Seq+ 8871 ChimerSeq FusionScan TCGA_RNA-Seq CHMP4A-MRPL52 CHMP4A chr14 24682614 - MRPL52 chr14 23303380 + Exonic hg19 OV TCGA-24-2019 2 In-Frame Intra-chr q12 q11.2 8872 ChimerSeq FusionScan TCGA_RNA-Seq RAB33B-SEC24D RAB33B chr4 140375598 + SEC24D chr4 119666215 - Exonic hg19 OV TCGA-13-1497 4 In-Frame Intra-chr q31.1 q26 Seq+ 8873 ChimerSeq FusionScan TCGA_RNA-Seq SP3-NDUFB3 SP3 chr2 174819600 - NDUFB3 chr2 201943603 + Exonic hg19 OV TCGA-13-1497 4 CDS-5'UTR Intra-chr q31.1 Transcription factor q33.1 Seq+ 8874 ChimerSeq FusionScan TCGA_RNA-Seq GGT7-GSS GGT7 chr20 33460449 - GSS chr20 33539663 - Exonic hg19 OV TCGA-13-1497 3 CDS-5'UTR Intra-chr q11.22 q11.22 8875 ChimerSeq FusionScan TCGA_RNA-Seq FAF2-METTL2B FAF2 chr5 175875471 + METTL2B chr7 128138089 + Exonic hg19 OV TCGA-13-1497 3 Out-of-Frame Inter-chr q35.2 q32.1 8876 ChimerSeq FusionScan TCGA_RNA-Seq SPRED3-RFXANK SPRED3 chr19 38885116 + RFXANK chr19 19304747 + Exonic hg19 OV TCGA-13-1497 2 3'UTR-5'UTR Intra-chr q13.2 p13.11 8877 ChimerSeq FusionScan TCGA_RNA-Seq PRKAG2-NUB1 PRKAG2 chr7 151329154 - NUB1 chr7 151042433 + Exonic hg19 OV TCGA-13-1497 2 In-Frame Intra-chr q36.1 q36.1 Seq+ 8878 ChimerSeq FusionScan TCGA_RNA-Seq BRI3-C1orf122 BRI3 chr7 97911765 + C1orf122 chr1 38274202 + Exonic hg19 OV TCGA-13-1497 2 In-Frame Inter-chr q21.3 p34.3 8879 ChimerSeq FusionScan TCGA_RNA-Seq SP3-NDUFB3 SP3 chr2 174828488 - NDUFB3 chr2 201943603 + Exonic hg19 OV TCGA-13-1497 2 CDS-5'UTR Intra-chr q31.1 Transcription factor q33.1 Seq+ 8880 ChimerSeq FusionScan TCGA_RNA-Seq MBOAT1-POT1 MBOAT1 chr6 20212366 - POT1 chr7 124465411 - Exonic hg19 OV TCGA-13-1497 2 In-Frame Inter-chr p22.3 q31.33 Oncogene 8881 ChimerSeq FusionScan TCGA_RNA-Seq MTSS1L-DGCR8 MTSS1L chr16 70719625 - DGCR8 chr22 20077498 + Exonic hg19 OV TCGA-13-1497 2 In-Frame Inter-chr q22.1 q11.21 8882 ChimerSeq FusionScan TCGA_RNA-Seq METTL2B-FAF2 METTL2B chr7 128117227 + FAF2 chr5 175906188 + Exonic hg19 OV TCGA-13-1497 2 Out-of-Frame Inter-chr q32.1 q35.2 8883 ChimerSeq FusionScan TCGA_RNA-Seq RPL36-MSLN RPL36 chr19 5691464 + MSLN chr16 817375 + Exonic hg19 OV TCGA-13-1497 2 Out-of-Frame Inter-chr p13.3 p13.3 8884 ChimerSeq FusionScan TCGA_RNA-Seq INSR-ANKDD1A INSR chr19 7293802 - ANKDD1A chr15 65207995 + Exonic hg19 OV TCGA-61-1900 3 In-Frame Inter-chr p13.2 TK:InsR q22.31 8885 ChimerSeq FusionScan TCGA_RNA-Seq DONSON-TMCO3 DONSON chr21 34959827 - TMCO3 chr13 114149816 + Exonic hg19 OV TCGA-61-1900 2 CDS-5'UTR Inter-chr q22.11 q34 8886 ChimerSeq FusionScan TCGA_RNA-Seq IGF2BP2-TCF12 IGF2BP2 chr3 185540940 - TCF12 chr15 57355947 + Exonic hg19 OV TCGA-61-1900 2 Out-of-Frame Inter-chr q27.2 q21.3 Oncogene Transcription factor 8887 ChimerSeq FusionScan TCGA_RNA-Seq LHFPL2-TARS LHFPL2 chr5 77860635 - TARS chr5 33445429 + Exonic hg19 OV TCGA-61-1900 2 5'UTR-CDS Intra-chr q14.1 p13.3 8888 ChimerSeq FusionScan TCGA_RNA-Seq HSP90AA1-EIF4A2 HSP90AA1 chr14 102549370 - EIF4A2 chr3 186504915 + Exonic hg19 OV TCGA-61-1900 2 In-Frame Inter-chr q32.31 Oncogene q27.3 8889 ChimerSeq FusionScan TCGA_RNA-Seq PPP3R1-YLPM1 PPP3R1 chr2 68444223 - YLPM1 chr14 75295915 + Exonic hg19 OV TCGA-61-1900 2 In-Frame Inter-chr p14 q24.3 8890 ChimerSeq FusionScan TCGA_RNA-Seq RASA2-PLS1 RASA2 chr3 141235273 + PLS1 chr3 142383043 + Exonic hg19 OV TCGA-61-1900 2 CDS-5'UTR Intra-chr q23 q23 8891 ChimerSeq FusionScan TCGA_RNA-Seq NKD1-NOD2 NKD1 chr16 50666319 + NOD2 chr16 50744468 + Exonic hg19 OV TCGA-04-1514 2 In-Frame Intra-chr q12.1 q12.1 Seq+ 8892 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC3-BAZ1B DNAJC3 chr13 96361591 + BAZ1B chr7 72884813 - Exonic hg19 OV TCGA-04-1514 2 In-Frame Inter-chr q32.1 q11.23 8893 ChimerSeq FusionScan TCGA_RNA-Seq KLF13-DTX2 KLF13 chr15 31619992 + DTX2 chr7 76092861 + Exonic hg19 OV TCGA-24-1425 3 CDS-5'UTR Inter-chr Transcription factor Seq+ 8894 ChimerSeq FusionScan TCGA_RNA-Seq KIF26B-SMYD3 KIF26B chr1 245319985 + SMYD3 chr1 246093239 - Exonic hg19 OV TCGA-24-1425 2 In-Frame Intra-chr q44 Transcription factor Seq+ 8895 ChimerSeq FusionScan TCGA_RNA-Seq NAT10-SLC3A2 NAT10 chr11 34133770 + SLC3A2 chr11 62655606 + Exonic hg19 OV TCGA-24-1425 2 In-Frame Intra-chr p13 q12.3 8896 ChimerSeq FusionScan TCGA_RNA-Seq NF1-RBX1 NF1 chr17 29422387 + RBX1 chr22 41349558 + Exonic hg19 OV TCGA-61-1738 9 In-Frame Inter-chr q11.2 Oncogene Tumor suppressor gene q13.2 Seq+ 8897 ChimerSeq FusionScan TCGA_RNA-Seq FOSL2-SNX17 FOSL2 chr2 28616689 + SNX17 chr2 27594135 + Exonic hg19 OV TCGA-61-1738 8 In-Frame Intra-chr p23.2 Transcription factor p23.3 Seq+ 8898 ChimerSeq FusionScan TCGA_RNA-Seq GDF15-MAST3 GDF15 chr19 18497276 + MAST3 chr19 18260000 + Exonic hg19 OV TCGA-61-1738 3 In-Frame Intra-chr p13.11 p13.11 AGC:MAST Seq+ 8899 ChimerSeq FusionScan TCGA_RNA-Seq NF1-RBX1 NF1 chr17 29422387 + RBX1 chr22 41360050 + Exonic hg19 OV TCGA-61-1738 3 Out-of-Frame Inter-chr q11.2 Oncogene Tumor suppressor gene q13.2 Seq+ 8900 ChimerSeq FusionScan TCGA_RNA-Seq AHDC1-IFI6 AHDC1 chr1 27873771 - IFI6 chr1 27992986 - Exonic hg19 OV TCGA-61-1738 2 3'UTR-CDS Intra-chr p35.3 Transcription factor p35.3 Seq+ 8901 ChimerSeq FusionScan TCGA_RNA-Seq NCOA6-SLC10A1 NCOA6 chr20 33413274 - SLC10A1 chr14 70246077 - Exonic hg19 OV TCGA-61-1738 2 5'UTR-CDS Inter-chr q11.22 q24.1 Seq+ 8902 ChimerSeq FusionScan TCGA_RNA-Seq SEMA4B-YIPF1 SEMA4B chr15 90764997 + YIPF1 chr1 54320724 - Exonic hg19 OV TCGA-61-1738 2 CDS-3'UTR Inter-chr q26.1 p32.3 8903 ChimerSeq FusionScan TCGA_RNA-Seq DNM2-PDE4A DNM2 chr19 10829079 + PDE4A chr19 10556893 + Exonic hg19 OV TCGA-61-1738 2 In-Frame Intra-chr p13.2 p13.2 Seq+ 8904 ChimerSeq FusionScan TCGA_RNA-Seq ARL8B-ITPR1 ARL8B chr3 5164273 + ITPR1 chr3 4725069 + Exonic hg19 OV TCGA-61-1738 2 Out-of-Frame Intra-chr p26.1 p26.1 Seq+ 8905 ChimerSeq FusionScan TCGA_RNA-Seq GEMIN7-APOC1 GEMIN7 chr19 45583287 + APOC1 chr19 45422429 + Exonic hg19 OV TCGA-61-1738 2 5'UTR-CDS Intra-chr q13.32 q13.32 Seq+ 8906 ChimerSeq FusionScan TCGA_RNA-Seq SUMO2-POLR2K SUMO2 chr17 73178908 - POLR2K chr8 101163574 + Exonic hg19 OV TCGA-61-1738 2 CDS-5'UTR Inter-chr q25.1 q22.2 Seq+ 8907 ChimerSeq FusionScan TCGA_RNA-Seq XPO7-NBN XPO7 chr8 21777299 + NBN chr8 90983518 - Exonic hg19 OV TCGA-57-1585 8 Out-of-Frame Intra-chr p21.3 q21.3 Oncogene Tumor suppressor gene Seq+ 8908 ChimerSeq FusionScan TCGA_RNA-Seq NSD1-ZNF346 NSD1 chr5 176560953 + ZNF346 chr5 176477751 + Exonic hg19 OV TCGA-57-1585 5 5'UTR-CDS Intra-chr q35.3 Oncogene q35.2 Transcription factor Seq+ 8909 ChimerSeq FusionScan TCGA_RNA-Seq EIF2C2-POM121 EIF2C2 chr8 141645583 - POM121 chr7 72409128 + Exonic hg19 OV TCGA-57-1585 5 Out-of-Frame Inter-chr q11.23 8910 ChimerSeq FusionScan TCGA_RNA-Seq XPO7-NBN XPO7 chr8 21777299 + NBN chr8 90976735 - Exonic hg19 OV TCGA-57-1585 5 Out-of-Frame Intra-chr p21.3 q21.3 Oncogene Tumor suppressor gene Seq+ 8911 ChimerSeq FusionScan TCGA_RNA-Seq AFAP1-EVC2 AFAP1 chr4 7941382 - EVC2 chr4 5570367 - Exonic hg19 OV TCGA-57-1585 4 5'UTR-CDS Intra-chr p16.1 p16.2 Seq+ 8912 ChimerSeq FusionScan TCGA_RNA-Seq EIF2C2-POM121C EIF2C2 chr8 141645583 - POM121C chr7 75054991 - Exonic hg19 OV TCGA-57-1585 3 Out-of-Frame Inter-chr q11.23 8913 ChimerSeq FusionScan TCGA_RNA-Seq PRR7-GRK6 PRR7 chr5 176873961 + GRK6 chr5 176857872 + Exonic hg19 OV TCGA-57-1585 3 5'UTR-CDS Intra-chr q35.3 q35.3 8914 ChimerSeq FusionScan TCGA_RNA-Seq FMNL1-NMT1 FMNL1 chr17 43299620 + NMT1 chr17 43159011 + Exonic hg19 OV TCGA-57-1585 3 Out-of-Frame Intra-chr q21.31 q21.31 Seq+ 8915 ChimerSeq FusionScan TCGA_RNA-Seq CAPZA2-C7orf33 CAPZA2 chr7 116538889 + C7orf33 chr7 148311133 + Exonic hg19 OV TCGA-57-1585 3 In-Frame Intra-chr q31.2 q36.1 Seq+ 8916 ChimerSeq FusionScan TCGA_RNA-Seq CD55-UBE2G2 CD55 chr1 207510754 + UBE2G2 chr21 46208010 - Exonic hg19 OV TCGA-57-1585 2 In-Frame Inter-chr q32.2 q22.3 8917 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-CKB RCC1 chr1 28832596 + CKB chr14 103986929 - Exonic hg19 OV TCGA-57-1585 2 5'UTR-CDS Inter-chr p35.3 q32.33 8918 ChimerSeq FusionScan TCGA_RNA-Seq CRHR1-KANSL1 CRHR1 chr17 43699407 + KANSL1 chr17 44249598 - Exonic hg19 OV TCGA-57-1585 2 5'UTR-5'UTR Intra-chr q21.31 Pub 8919 ChimerSeq FusionScan TCGA_RNA-Seq CD2AP-LELP1 CD2AP chr6 47549801 + LELP1 chr1 153177162 + Exonic hg19 OV TCGA-57-1585 2 CDS-5'UTR Inter-chr p12.3 q21.3 8920 ChimerSeq FusionScan TCGA_RNA-Seq JAK1-FNBP1 JAK1 chr1 65432015 - FNBP1 chr9 132671278 - Exonic hg19 OV TCGA-57-1585 2 5'UTR-CDS Inter-chr p31.3 TK:JakA Oncogene q34.11 8921 ChimerSeq FusionScan TCGA_RNA-Seq PRRC2A-ACBD3 PRRC2A chr6 31592299 + ACBD3 chr1 226352630 - Exonic hg19 OV TCGA-57-1585 2 Out-of-Frame Inter-chr q42.12 8922 ChimerSeq FusionScan TCGA_RNA-Seq STK36-BCS1L STK36 chr2 219538679 + BCS1L chr2 219527605 + Exonic hg19 OV TCGA-57-1585 2 Out-of-Frame Intra-chr q35 Oncogene q35 8923 ChimerSeq FusionScan TCGA_RNA-Seq SIL1-AGTPBP1 SIL1 chr5 138456723 - AGTPBP1 chr9 88162201 - Exonic hg19 OV TCGA-57-1585 2 Out-of-Frame Inter-chr q31.2 q21.33 8924 ChimerSeq FusionScan TCGA_RNA-Seq PCBP4-TLR9 PCBP4 chr3 51994881 - TLR9 chr3 52258328 - Exonic hg19 OV TCGA-57-1585 2 In-Frame Intra-chr p21.2 p21.2 8925 ChimerSeq FusionScan TCGA_RNA-Seq SORL1-TECTA SORL1 chr11 121360819 + TECTA chr11 121058540 + Exonic hg19 OV TCGA-13-1487 12 In-Frame Intra-chr q24.1 q23.3 Seq+ 8926 ChimerSeq FusionScan TCGA_RNA-Seq EZR-C1orf50 EZR chr6 159239113 - C1orf50 chr1 43239233 + Exonic hg19 OV TCGA-13-1487 6 In-Frame Inter-chr q25.3 p34.2 Seq+ 8927 ChimerSeq FusionScan TCGA_RNA-Seq C1orf31-SLC35F3 C1orf31 chr1 234510135 + SLC35F3 chr1 234444846 + Exonic hg19 OV TCGA-13-1487 5 Out-of-Frame Intra-chr q42.2 8928 ChimerSeq FusionScan TCGA_RNA-Seq LONP1-CATSPERD LONP1 chr19 5719714 - CATSPERD chr19 5727278 + Exonic hg19 OV TCGA-13-1487 3 In-Frame Intra-chr p13.3 p13.3 Seq+ 8929 ChimerSeq FusionScan TCGA_RNA-Seq PSMD1-ARSG PSMD1 chr2 231921755 + ARSG chr17 66416329 + Exonic hg19 OV TCGA-13-1487 3 In-Frame Inter-chr q37.1 q24.2 Seq+ 8930 ChimerSeq FusionScan TCGA_RNA-Seq SUMF1-NNT SUMF1 chr3 4452548 - NNT chr5 43615949 + Exonic hg19 OV TCGA-13-1487 2 In-Frame Inter-chr p26.1 p12 8931 ChimerSeq FusionScan TCGA_RNA-Seq TOP1-FAM193B TOP1 chr20 39658095 + FAM193B chr5 176952206 - Exonic hg19 OV TCGA-13-1487 2 Out-of-Frame Inter-chr q12 Oncogene q35.3 Seq+ 8932 ChimerSeq FusionScan TCGA_RNA-Seq TOP1-FAM193B TOP1 chr20 39658095 + FAM193B chr5 176949072 - Exonic hg19 OV TCGA-13-1487 2 Out-of-Frame Inter-chr q12 Oncogene q35.3 Seq+ 8933 ChimerSeq FusionScan TCGA_RNA-Seq MCM5-LYN MCM5 chr22 35799535 + LYN chr8 56910904 + Exonic hg19 OV TCGA-25-1329 2 In-Frame Inter-chr q12.3 q12.1 TK:Src Seq+ 8934 ChimerSeq FusionScan TCGA_RNA-Seq PPM1H-C19orf54 PPM1H chr12 63328271 - C19orf54 chr19 41251103 - Exonic hg19 OV TCGA-09-2048 2 In-Frame Inter-chr q14.2 q13.2 8935 ChimerSeq FusionScan TCGA_RNA-Seq TAF13-LAMP1 TAF13 chr1 109618542 - LAMP1 chr13 113960799 + Exonic hg19 OV TCGA-09-2048 2 Out-of-Frame Inter-chr p13.3 q34 Oncogene 8936 ChimerSeq FusionScan TCGA_RNA-Seq SIRT2-TSPAN4 SIRT2 chr19 39390145 - TSPAN4 chr11 847200 + Exonic hg19 OV TCGA-09-2048 2 5'UTR-5'UTR Inter-chr Tumor suppressor gene p15.5 8937 ChimerSeq FusionScan TCGA_RNA-Seq C2CD3-SYTL1 C2CD3 chr11 73849764 - SYTL1 chr1 27671787 + Exonic hg19 OV TCGA-09-2048 2 CDS-5'UTR Inter-chr q13.4 p36.11 Seq+ 8938 ChimerSeq FusionScan TCGA_RNA-Seq VCL-ADK VCL chr10 75868914 + ADK chr10 76349039 + Exonic hg19 OV TCGA-24-2254 22 In-Frame Intra-chr q22.2 q22.2 Seq+ 8939 ChimerSeq FusionScan TCGA_RNA-Seq TYMS-SUMO1 TYMS chr18 662320 + SUMO1 chr2 203075529 - Exonic hg19 OV TCGA-24-2254 2 3'UTR-CDS Inter-chr p11.32 q33.1 8940 ChimerSeq FusionScan TCGA_RNA-Seq NFKB1-PHF3 NFKB1 chr4 103459113 + PHF3 chr6 64389900 + Exonic hg19 OV TCGA-24-2254 2 Out-of-Frame Inter-chr q24 Oncogene Tumor suppressor gene Transcription factor q12 8941 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 OV TCGA-24-2254 2 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 8942 ChimerSeq FusionScan TCGA_RNA-Seq TRAF7-RAB26 TRAF7 chr16 2205859 + RAB26 chr16 2201569 + Exonic hg19 OV TCGA-57-1582 5 5'UTR-CDS Intra-chr p13.3 Oncogene p13.3 Seq+ 8943 ChimerSeq FusionScan TCGA_RNA-Seq FAM168A-DCAF8 FAM168A chr11 73179449 - DCAF8 chr1 160213824 - Exonic hg19 OV TCGA-57-1582 3 CDS-5'UTR Inter-chr q13.4 q23.2 Seq+ 8944 ChimerSeq FusionScan TCGA_RNA-Seq MCEE-CDC42 MCEE chr2 71357309 - CDC42 chr1 22404921 + Exonic hg19 OV TCGA-57-1582 2 CDS-5'UTR Inter-chr p13.3 p36.12 8945 ChimerSeq FusionScan TCGA_RNA-Seq ADAM10-BLVRB ADAM10 chr15 59041678 - BLVRB chr19 40964452 - Exonic hg19 OV TCGA-57-1582 2 3'UTR-CDS Inter-chr q21.3 q13.2 Seq+ 8946 ChimerSeq FusionScan TCGA_RNA-Seq EPS15L1-CALR3 EPS15L1 chr19 16582723 - CALR3 chr19 16591517 - Exonic hg19 OV TCGA-57-1582 2 In-Frame Intra-chr p13.11 p13.11 Seq+ 8947 ChimerSeq FusionScan TCGA_RNA-Seq STUB1-MECP2 STUB1 chr16 730684 + MECP2 chrX 153298008 - Exonic hg19 OV TCGA-57-1582 2 Out-of-Frame Inter-chr p13.3 Tumor suppressor gene q28 Transcription factor Seq+ 8948 ChimerSeq FusionScan TCGA_RNA-Seq FUT8-C4orf34 FUT8 chr14 65922436 + C4orf34 chr4 39606800 - Exonic hg19 OV TCGA-57-1582 2 5'UTR-5'UTR Inter-chr q23.3 8949 ChimerSeq FusionScan TCGA_RNA-Seq PCGF2-CISD3 PCGF2 chr17 36892342 - CISD3 chr17 36889528 + Exonic hg19 OV TCGA-57-1582 2 In-Frame Intra-chr Tumor suppressor gene Transcription factor 8950 ChimerSeq FusionScan TCGA_RNA-Seq RCOR1-PPP2R5C RCOR1 chr14 103059662 + PPP2R5C chr14 102391477 + Exonic hg19 OV TCGA-13-1410 9 Out-of-Frame Intra-chr q32.31 q32.31 Tumor suppressor gene Seq+ 8951 ChimerSeq FusionScan TCGA_RNA-Seq ASXL1-TM9SF4 ASXL1 chr20 30956926 + TM9SF4 chr20 30720815 + Exonic hg19 OV TCGA-13-1410 8 In-Frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 8952 ChimerSeq FusionScan TCGA_RNA-Seq MAP2K2-INSR MAP2K2 chr19 4110506 - INSR chr19 7132328 - Exonic hg19 OV TCGA-13-1410 6 In-Frame Intra-chr p13.3 STE:STE7 Oncogene p13.2 TK:InsR Seq+ 8953 ChimerSeq FusionScan TCGA_RNA-Seq SUPT5H-CALR3 SUPT5H chr19 39936605 + CALR3 chr19 16594926 - Exonic hg19 OV TCGA-13-1410 5 In-Frame Intra-chr q13.2 p13.11 Seq+ 8954 ChimerSeq FusionScan TCGA_RNA-Seq SUPT5H-CALR3 SUPT5H chr19 39936605 + CALR3 chr19 16601381 - Exonic hg19 OV TCGA-13-1410 4 Out-of-Frame Intra-chr q13.2 p13.11 Seq+ 8955 ChimerSeq FusionScan TCGA_RNA-Seq CALCOCO2-PALM CALCOCO2 chr17 46908440 + PALM chr19 726137 + Exonic hg19 OV TCGA-13-1410 2 5'UTR-CDS Inter-chr q21.32 p13.3 8956 ChimerSeq FusionScan TCGA_RNA-Seq TIMM23-PKM2 TIMM23 chr10 51620323 - PKM2 chr15 72501232 - Exonic hg19 OV TCGA-13-1410 2 Out-of-Frame Inter-chr q11.22 8957 ChimerSeq FusionScan TCGA_RNA-Seq RPL27A-TFG RPL27A chr11 8705628 + TFG chr3 100455419 + Exonic hg19 OV TCGA-13-1410 2 Out-of-Frame Inter-chr p15.4 q12.2 8958 ChimerSeq FusionScan TCGA_RNA-Seq CBS-MIF CBS chr21 44476912 - MIF chr22 24236564 + Exonic hg19 OV TCGA-13-1410 2 CDS-5'UTR Inter-chr q22.3 q11.23 Tumor suppressor gene 8959 ChimerSeq FusionScan TCGA_RNA-Seq POLR2A-SERINC2 POLR2A chr17 7388176 + SERINC2 chr1 31905813 + Exonic hg19 OV TCGA-13-1410 2 Out-of-Frame Inter-chr p13.1 p35.2 8960 ChimerSeq FusionScan TCGA_RNA-Seq TRERF1-MBOAT1 TRERF1 chr6 42268375 - MBOAT1 chr6 20109980 - Exonic hg19 OV TCGA-13-1410 2 5'UTR-CDS Intra-chr p21.1 Transcription factor p22.3 8961 ChimerSeq FusionScan TCGA_RNA-Seq SPATA2-SHC1 SPATA2 chr20 48524691 - SHC1 chr1 154942675 - Exonic hg19 OV TCGA-13-1410 2 CDS-5'UTR Inter-chr q13.13 q21.3 8962 ChimerSeq FusionScan TCGA_RNA-Seq PSMC1-HSD17B14 PSMC1 chr14 90722944 + HSD17B14 chr19 49318398 - Exonic hg19 OV TCGA-13-1410 2 In-Frame Inter-chr q32.11 q13.33 8963 ChimerSeq FusionScan TCGA_RNA-Seq YWHAH-DEPDC5 YWHAH chr22 32340806 + DEPDC5 chr22 32297727 + Exonic hg19 OV TCGA-23-1022 8 Out-of-Frame Intra-chr q12.3 q12.2 Seq+ 8964 ChimerSeq FusionScan TCGA_RNA-Seq C15orf27-SMAD6 C15orf27 chr15 76452509 + SMAD6 chr15 67073334 + Exonic hg19 OV TCGA-23-1022 4 Out-of-Frame Intra-chr q22.31 Seq+ 8965 ChimerSeq FusionScan TCGA_RNA-Seq ITGB1-SEPT2 ITGB1 chr10 33197295 - SEPT2 chr2 242289487 + Exonic hg19 OV TCGA-23-1022 2 In-Frame Inter-chr p11.22 Tumor suppressor gene q37.3 8966 ChimerSeq FusionScan TCGA_RNA-Seq C17orf62-EXOSC1 C17orf62 chr17 80408575 - EXOSC1 chr10 99197507 - Exonic hg19 OV TCGA-23-1022 2 5'UTR-CDS Inter-chr q25.3 q24.1 8967 ChimerSeq FusionScan TCGA_RNA-Seq TSC2-RBP1 TSC2 chr16 2108874 + RBP1 chr3 139258671 - Exonic hg19 OV TCGA-24-1552 9 CDS-5'UTR Inter-chr p13.3 Oncogene Tumor suppressor gene q23 Tumor suppressor gene Seq+ 8968 ChimerSeq FusionScan TCGA_RNA-Seq NUDT19-SLC7A9 NUDT19 chr19 33183580 + SLC7A9 chr19 33324229 - Exonic hg19 OV TCGA-24-1552 7 In-Frame Intra-chr q13.11 q13.11 Seq+ 8969 ChimerSeq FusionScan TCGA_RNA-Seq NNT-NIM1 NNT chr5 43628489 + NIM1 chr5 43277158 + Exonic hg19 OV TCGA-24-1552 5 In-Frame Intra-chr p12 CAMK:CAMKL Seq+ 8970 ChimerSeq FusionScan TCGA_RNA-Seq DSTN-SLC24A3 DSTN chr20 17581690 + SLC24A3 chr20 19560643 + Exonic hg19 OV TCGA-24-1552 2 Out-of-Frame Intra-chr p12.1 p11.23 Seq+ 8971 ChimerSeq FusionScan TCGA_RNA-Seq PIGT-ZBTB8OS PIGT chr20 44045334 + ZBTB8OS chr1 33099673 - Exonic hg19 OV TCGA-24-1552 2 In-Frame Inter-chr q13.12 p35.1 8972 ChimerSeq FusionScan TCGA_RNA-Seq MFSD6-NAB1 MFSD6 chr2 191302287 + NAB1 chr2 191523883 + Exonic hg19 OV TCGA-24-1552 2 CDS-5'UTR Intra-chr q32.2 q32.2 8973 ChimerSeq FusionScan TCGA_RNA-Seq PNKD-OLA1 PNKD chr2 219188154 + OLA1 chr2 175094179 - Exonic hg19 OV TCGA-24-1552 2 In-Frame Intra-chr q35 q31.1 8974 ChimerSeq FusionScan TCGA_RNA-Seq SLC24A3-DSTN SLC24A3 chr20 19566188 + DSTN chr20 17585199 + Exonic hg19 OV TCGA-24-1552 2 Out-of-Frame Intra-chr p11.23 p12.1 Seq+ 8975 ChimerSeq FusionScan TCGA_RNA-Seq NSFL1C-EPSTI1 NSFL1C chr20 1435611 - EPSTI1 chr13 43528157 - Exonic hg19 OV TCGA-61-1911 2 In-Frame Inter-chr p13 q14.11 Seq+ 8976 ChimerSeq FusionScan TCGA_RNA-Seq TPX2-DEFB123 TPX2 chr20 30371724 + DEFB123 chr20 30037831 + Exonic hg19 OV TCGA-61-1911 2 Out-of-Frame Intra-chr q11.21 q11.21 Seq+ 8977 ChimerSeq FusionScan TCGA_RNA-Seq AKAP9-CDK14 AKAP9 chr7 91570461 + CDK14 chr7 90419887 + Exonic hg19 OV TCGA-61-1725 2 Out-of-Frame Intra-chr q21.2 Oncogene q21.13 Seq+ 8978 ChimerSeq FusionScan TCGA_RNA-Seq TMEM93-CEACAM19 TMEM93 chr17 3572193 + CEACAM19 chr19 45185838 + Exonic hg19 OV TCGA-30-1866 5 5'UTR-CDS Inter-chr q13.31 Seq+ 8979 ChimerSeq FusionScan TCGA_RNA-Seq SPTLC2-ATP5S SPTLC2 chr14 78036726 - ATP5S chr14 50789228 + Exonic hg19 OV TCGA-30-1866 2 Out-of-Frame Intra-chr q24.3 q21.3 Seq+ 8980 ChimerSeq FusionScan TCGA_RNA-Seq TYK2-ZNRF1 TYK2 chr19 10488889 - ZNRF1 chr16 75127469 + Exonic hg19 OV TCGA-30-1866 2 In-Frame Inter-chr p13.2 TK:JakA q23.1 8981 ChimerSeq FusionScan TCGA_RNA-Seq OS9-KPNA2 OS9 chr12 58114046 + KPNA2 chr17 66038200 + Exonic hg19 OV TCGA-30-1866 2 Out-of-Frame Inter-chr q13.3 q24.2 8982 ChimerSeq FusionScan TCGA_RNA-Seq AKAP13-SPI1 AKAP13 chr15 86129054 + SPI1 chr11 47380557 - Exonic hg19 OV TCGA-30-1866 2 In-Frame Inter-chr q25.3 p11.2 Tumor suppressor gene Transcription factor 8983 ChimerSeq FusionScan TCGA_RNA-Seq MED18-UNC50 MED18 chr1 28655691 + UNC50 chr2 99226218 + Exonic hg19 OV TCGA-30-1866 2 5'UTR-5'UTR Inter-chr p35.3 q11.2 8984 ChimerSeq FusionScan TCGA_RNA-Seq RB1CC1-ATP6V1H RB1CC1 chr8 53626634 - ATP6V1H chr8 54742093 - Exonic hg19 OV TCGA-30-1866 2 5'UTR-CDS Intra-chr q11.23 Tumor suppressor gene q11.23 8985 ChimerSeq FusionScan TCGA_RNA-Seq BMP7-RBM38 BMP7 chr20 55749986 - RBM38 chr20 55982598 + Exonic hg19 OV TCGA-24-2288 26 Out-of-Frame Intra-chr q13.31 q13.31 Tumor suppressor gene Seq+ 8986 ChimerSeq FusionScan TCGA_RNA-Seq SPON1-STXBP6 SPON1 chr11 13984689 + STXBP6 chr14 25326363 - Exonic hg19 OV TCGA-24-2288 19 In-Frame Inter-chr p15.2 q12 Seq+ 8987 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPK-UBQLN1 HNRNPK chr9 86591909 - UBQLN1 chr9 86301070 - Exonic hg19 OV TCGA-24-2288 15 In-Frame Intra-chr q21.32 q21.32 Seq+ 8988 ChimerSeq FusionScan TCGA_RNA-Seq TOR1AIP2-ACBD6 TOR1AIP2 chr1 179846373 - ACBD6 chr1 180283857 - Exonic hg19 OV TCGA-24-2288 12 5'UTR-CDS Intra-chr q25.2 q25.3 Seq+ 8989 ChimerSeq FusionScan TCGA_RNA-Seq CYTH3-USP42 CYTH3 chr7 6226680 - USP42 chr7 6199080 + Exonic hg19 OV TCGA-24-2288 11 Out-of-Frame Intra-chr p22.1 p22.1 Seq+ 8990 ChimerSeq FusionScan TCGA_RNA-Seq STIP1-GPR137 STIP1 chr11 63965446 + GPR137 chr11 64056508 + Exonic hg19 OV TCGA-24-2288 10 In-Frame Intra-chr q13.1 q13.1 8991 ChimerSeq FusionScan TCGA_RNA-Seq TNS3-SUN3 TNS3 chr7 47621648 - SUN3 chr7 48035743 - Exonic hg19 OV TCGA-24-2288 6 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 8992 ChimerSeq FusionScan TCGA_RNA-Seq SETD5-CIDEC SETD5 chr3 9466210 + CIDEC chr3 9920195 - Exonic hg19 OV TCGA-24-2288 5 5'UTR-5'UTR Intra-chr p25.3 p25.3 Seq+ 8993 ChimerSeq FusionScan TCGA_RNA-Seq TNS3-SUN3 TNS3 chr7 47621648 - SUN3 chr7 48028477 - Exonic hg19 OV TCGA-24-2288 4 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 8994 ChimerSeq FusionScan TCGA_RNA-Seq NCOA3-LRRC49 NCOA3 chr20 46130763 + LRRC49 chr15 71302145 + Exonic hg19 OV TCGA-24-2288 3 5'UTR-CDS Inter-chr q13.12 Transcription factor q23 Seq+ 8995 ChimerSeq FusionScan TCGA_RNA-Seq STIP1-GPR137 STIP1 chr11 63965446 + GPR137 chr11 64056614 + Exonic hg19 OV TCGA-24-2288 3 Out-of-Frame Intra-chr q13.1 q13.1 8996 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R2A-DHTKD1 PPP2R2A chr8 26151256 + DHTKD1 chr10 12123470 + Exonic hg19 OV TCGA-24-2288 3 In-Frame Inter-chr p21.2 p14 Seq+ 8997 ChimerSeq FusionScan TCGA_RNA-Seq C10orf11-MYO1D C10orf11 chr10 77818541 + MYO1D chr17 30821933 - Exonic hg19 OV TCGA-24-2288 2 Out-of-Frame Inter-chr q11.2 Seq+ 8998 ChimerSeq FusionScan TCGA_RNA-Seq SETD5-CIDEC SETD5 chr3 9466210 + CIDEC chr3 9920740 - Exonic hg19 OV TCGA-24-2288 2 5'UTR-5'UTR Intra-chr p25.3 p25.3 Seq+ 8999 ChimerSeq FusionScan TCGA_RNA-Seq WNK1-ERC1 WNK1 chr12 863490 + ERC1 chr12 1192329 + Exonic hg19 OV TCGA-24-2288 2 In-Frame Intra-chr p13.33 Seq+ 9000 ChimerSeq FusionScan TCGA_RNA-Seq PHF20-EPB41L1 PHF20 chr20 34389527 + EPB41L1 chr20 34785780 + Exonic hg19 OV TCGA-24-2288 2 Out-of-Frame Intra-chr q11.22 Transcription factor q11.23 Seq+ 9001 ChimerSeq FusionScan TCGA_RNA-Seq BMP7-DYNC2LI1 BMP7 chr20 55777530 - DYNC2LI1 chr2 44031780 + Exonic hg19 OV TCGA-29-2414 3 In-Frame Inter-chr q13.31 p21 Seq+ 9002 ChimerSeq FusionScan TCGA_RNA-Seq CHCHD7-CSPP1 CHCHD7 chr8 57124396 + CSPP1 chr8 67998241 + Exonic hg19 OV TCGA-29-2414 2 5'UTR-CDS Intra-chr q12.1 q13.1 9003 ChimerSeq FusionScan TCGA_RNA-Seq RPP21-NCOA5 RPP21 chr6 30313005 + NCOA5 chr20 44708092 - Exonic hg19 OV TCGA-29-2414 2 CDS-5'UTR Inter-chr q13.12 Tumor suppressor gene 9004 ChimerSeq FusionScan TCGA_RNA-Seq RAB34-NUFIP2 RAB34 chr17 27044230 - NUFIP2 chr17 27594548 - Exonic hg19 OV TCGA-24-1416 5 Out-of-Frame Intra-chr q11.2 q11.2 Seq+ 9005 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-COX5B RCC1 chr1 28835413 + COX5B chr2 98263529 + Exonic hg19 OV TCGA-24-1416 2 5'UTR-CDS Inter-chr p35.3 q11.2 9006 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-GNAS RCC1 chr1 28834672 + GNAS chr20 57470666 + Exonic hg19 OV TCGA-24-1416 2 5'UTR-5'UTR Inter-chr p35.3 q13.32 Oncogene 9007 ChimerSeq FusionScan TCGA_RNA-Seq SSNA1-GNB2L1 SSNA1 chr9 140083230 + GNB2L1 chr5 180666177 - Exonic hg19 OV TCGA-24-1416 2 Out-of-Frame Inter-chr q34.3 Tumor suppressor gene 9008 ChimerSeq FusionScan TCGA_RNA-Seq BCL2L14-ST6GALNAC2 BCL2L14 chr12 12224071 + ST6GALNAC2 chr17 74574898 - Exonic hg19 OV TCGA-24-1416 2 5'UTR-CDS Inter-chr q25.1 9009 ChimerSeq FusionScan TCGA_RNA-Seq PRPF4B-DSP PRPF4B chr6 4021700 + DSP chr6 7582874 + Exonic hg19 OV TCGA-24-1416 2 Out-of-Frame Intra-chr p25.2 p24.3 Tumor suppressor gene 9010 ChimerSeq FusionScan TCGA_RNA-Seq C6orf201-ECI2 C6orf201 chr6 4130595 + ECI2 chr6 4130483 - Exonic hg19 OV TCGA-24-1416 2 3'UTR-3'UTR Intra-chr p25.2 p25.2 9011 ChimerSeq FusionScan TCGA_RNA-Seq SSBP4-FKBP8 SSBP4 chr19 18530517 + FKBP8 chr19 18652805 - Exonic hg19 OV TCGA-24-1416 2 CDS-5'UTR Intra-chr p13.11 p13.11 9012 ChimerSeq FusionScan TCGA_RNA-Seq NUP54-APOA1 NUP54 chr4 77069460 - APOA1 chr11 116708123 - Exonic hg19 OV TCGA-24-1416 2 CDS-5'UTR Inter-chr q21.1 q23.3 9013 ChimerSeq FusionScan TCGA_RNA-Seq METTL2B-EFCAB3 METTL2B chr7 128117227 + EFCAB3 chr17 60491092 + Exonic hg19 OV TCGA-25-2042 4 Out-of-Frame Inter-chr q32.1 q23.2 9014 ChimerSeq FusionScan TCGA_RNA-Seq PTGIS-COL1A1 PTGIS chr20 48160841 - COL1A1 chr17 48276951 - Exonic hg19 OV TCGA-25-2042 2 Out-of-Frame Inter-chr q13.13 q21.33 Oncogene 9015 ChimerSeq FusionScan TCGA_RNA-Seq LAMA5-C20orf151 LAMA5 chr20 60901732 - C20orf151 chr20 60986052 - Exonic hg19 OV TCGA-25-2042 2 Out-of-Frame Intra-chr q13.33 Seq+ 9016 ChimerSeq FusionScan TCGA_RNA-Seq CLTB-GRHPR CLTB chr5 175824607 - GRHPR chr9 37426534 + Exonic hg19 OV TCGA-25-2042 2 In-Frame Inter-chr q35.2 p13.2 9017 ChimerSeq FusionScan TCGA_RNA-Seq PTCD3-TPI1 PTCD3 chr2 86335659 + TPI1 chr12 6978851 + Exonic hg19 OV TCGA-25-2042 2 Out-of-Frame Inter-chr p11.2 p13.31 9018 ChimerSeq FusionScan TCGA_RNA-Seq SEL1L3-BHLHE41 SEL1L3 chr4 25836818 - BHLHE41 chr12 26277515 - Exonic hg19 OV TCGA-25-2042 2 In-Frame Inter-chr p15.2 p12.1 Tumor suppressor gene Transcription factor 9019 ChimerSeq FusionScan TCGA_RNA-Seq NCK2-RHOQ NCK2 chr2 106471745 + RHOQ chr2 46803225 + Exonic hg19 OV TCGA-25-2042 2 Out-of-Frame Intra-chr q12.2 p21 9020 ChimerSeq FusionScan TCGA_RNA-Seq C19orf47-SCN1B C19orf47 chr19 40847745 - SCN1B chr19 35523431 + Exonic hg19 OV TCGA-25-1877 8 In-Frame Intra-chr q13.2 q13.11 Seq+ 9021 ChimerSeq FusionScan TCGA_RNA-Seq UBA2-ZNF146 UBA2 chr19 34955036 + ZNF146 chr19 36726560 + Exonic hg19 OV TCGA-25-1877 6 CDS-5'UTR Intra-chr q13.11 q13.12 Transcription factor Seq+ 9022 ChimerSeq FusionScan TCGA_RNA-Seq FXYD5-HNRNPUL1 FXYD5 chr19 35648404 + HNRNPUL1 chr19 41774127 + Exonic hg19 OV TCGA-25-1877 3 In-Frame Intra-chr q13.12 q13.2 Seq+ 9023 ChimerSeq FusionScan TCGA_RNA-Seq TANC1-PKP4 TANC1 chr2 159825294 + PKP4 chr2 159535092 + Exonic hg19 OV TCGA-25-1877 3 5'UTR-CDS Intra-chr q24.2 q24.1 Seq+ 9024 ChimerSeq FusionScan TCGA_RNA-Seq LARP4-NUP98 LARP4 chr12 50848200 + NUP98 chr11 3727857 - Exonic hg19 OV TCGA-25-1877 2 Out-of-Frame Inter-chr q13.12 p15.4 Oncogene Tumor suppressor gene 9025 ChimerSeq FusionScan TCGA_RNA-Seq PFDN2-DROSHA PFDN2 chr1 161071837 - DROSHA chr5 31521322 - Exonic hg19 OV TCGA-25-1877 2 Out-of-Frame Inter-chr q23.3 p13.3 9026 ChimerSeq FusionScan TCGA_RNA-Seq KDM3A-SDHAF2 KDM3A chr2 86683689 + SDHAF2 chr11 61213412 + Exonic hg19 OV TCGA-25-1877 2 Out-of-Frame Inter-chr p11.2 Tumor suppressor gene q12.2 9027 ChimerSeq FusionScan TCGA_RNA-Seq WDR59-UBAP2L WDR59 chr16 75018861 - UBAP2L chr1 154232423 + Exonic hg19 OV TCGA-25-1877 2 In-Frame Inter-chr q23.1 q21.3 9028 ChimerSeq FusionScan TCGA_RNA-Seq ZNF280D-HIAT1 ZNF280D chr15 57025655 - HIAT1 chr1 100515464 + Exonic hg19 OV TCGA-25-1877 2 5'UTR-CDS Inter-chr q21.3 Transcription factor 9029 ChimerSeq FusionScan TCGA_RNA-Seq MYO6-ADCK4 MYO6 chr6 76618344 + ADCK4 chr19 41216041 - Exonic hg19 OV TCGA-25-1877 2 In-Frame Inter-chr q14.1 Atypical:ABC1 9030 ChimerSeq FusionScan TCGA_RNA-Seq RNF135-RAB11FIP4 RNF135 chr17 29298463 + RAB11FIP4 chr17 29844668 + Exonic hg19 OV TCGA-61-2000 8 In-Frame Intra-chr q11.2 q11.2 Seq+ 9031 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHA7-SERGEF PLEKHA7 chr11 17035535 - SERGEF chr11 17809960 - Exonic hg19 OV TCGA-61-2000 7 Out-of-Frame Intra-chr p15.1 p15.1 Seq+ 9032 ChimerSeq FusionScan TCGA_RNA-Seq HBP1-LHFPL3 HBP1 chr7 106809472 + LHFPL3 chr7 104377121 + Exonic hg19 OV TCGA-61-2000 5 Out-of-Frame Intra-chr Tumor suppressor gene Transcription factor q22.2 Seq+ 9033 ChimerSeq FusionScan TCGA_RNA-Seq PARD3-CUL2 PARD3 chr10 34985245 - CUL2 chr10 35324224 - Exonic hg19 OV TCGA-61-2000 4 Out-of-Frame Intra-chr p11.21 p11.21 Tumor suppressor gene Seq+ 9034 ChimerSeq FusionScan TCGA_RNA-Seq FKBP8-MEF2B FKBP8 chr19 18649025 - MEF2B chr19 19258641 - Exonic hg19 OV TCGA-61-2000 3 Out-of-Frame Intra-chr p13.11 p13.11 Transcription factor Seq+ 9035 ChimerSeq FusionScan TCGA_RNA-Seq EXO1-WDR64 EXO1 chr1 242013888 + WDR64 chr1 241951150 + Exonic hg19 OV TCGA-61-2000 3 In-Frame Intra-chr q43 q43 Seq+ 9036 ChimerSeq FusionScan TCGA_RNA-Seq ZFYVE26-NEMF ZFYVE26 chr14 68234420 - NEMF chr14 50252038 - Exonic hg19 OV TCGA-61-2000 2 In-Frame Intra-chr q24.1 q21.3 9037 ChimerSeq FusionScan TCGA_RNA-Seq MGAT5-OLA1 MGAT5 chr2 135028121 + OLA1 chr2 175006728 - Exonic hg19 OV TCGA-61-2000 2 In-Frame Intra-chr q21.2 q31.1 9038 ChimerSeq FusionScan TCGA_RNA-Seq GTF2H3-CCDC60 GTF2H3 chr12 124130108 + CCDC60 chr12 119866487 + Exonic hg19 OV TCGA-61-2000 2 Out-of-Frame Intra-chr q24.31 q24.23 9039 ChimerSeq FusionScan TCGA_RNA-Seq MED4-PHF20L1 MED4 chr13 48669089 - PHF20L1 chr8 133806655 + Exonic hg19 OV TCGA-61-2000 2 In-Frame Inter-chr q14.2 q24.22 9040 ChimerSeq FusionScan TCGA_RNA-Seq TCF7L2-VTI1A TCF7L2 chr10 114799885 + VTI1A chr10 114575048 + Exonic hg19 OV TCGA-61-2000 2 Out-of-Frame Intra-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q25.2 Seq+ 9041 ChimerSeq FusionScan TCGA_RNA-Seq MTMR3-THOC5 MTMR3 chr22 30279348 + THOC5 chr22 29945147 - Exonic hg19 OV TCGA-61-2000 2 5'UTR-5'UTR Intra-chr q12.2 q12.2 9042 ChimerSeq FusionScan TCGA_RNA-Seq TMEM61-PHLDA3 TMEM61 chr1 55446753 + PHLDA3 chr1 201435306 - Exonic hg19 OV TCGA-23-1024 7 CDS-3'UTR Intra-chr p32.3 q32.1 Tumor suppressor gene Seq+ 9043 ChimerSeq FusionScan TCGA_RNA-Seq MAP4-CDC25A MAP4 chr3 48019354 - CDC25A chr3 48226185 - Exonic hg19 OV TCGA-23-1024 7 In-Frame Intra-chr p21.31 p21.31 Seq+ 9044 ChimerSeq FusionScan TCGA_RNA-Seq SCAP-SMARCC1 SCAP chr3 47476497 - SMARCC1 chr3 47680270 - Exonic hg19 OV TCGA-23-1024 5 Out-of-Frame Intra-chr p21.31 p21.31 Tumor suppressor gene Seq+ 9045 ChimerSeq FusionScan TCGA_RNA-Seq KLK8-NLRP4 KLK8 chr19 51504353 - NLRP4 chr19 56388361 + Exonic hg19 OV TCGA-23-1024 4 Out-of-Frame Intra-chr q13.41 q13.43 Seq+ 9046 ChimerSeq FusionScan TCGA_RNA-Seq MB21D2-SCARB1 MB21D2 chr3 192635418 - SCARB1 chr12 125263132 - Exonic hg19 OV TCGA-23-1024 2 Out-of-Frame Inter-chr q29 q24.31 9047 ChimerSeq FusionScan TCGA_RNA-Seq PEX7-SULT1C2 PEX7 chr6 137191141 + SULT1C2 chr2 108910102 + Exonic hg19 OV TCGA-23-1024 2 CDS-5'UTR Inter-chr q23.3 q12.3 9048 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 OV TCGA-23-1024 2 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 9049 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPK-PTMS HNRNPK chr9 86589431 - PTMS chr12 6879557 + Exonic hg19 OV TCGA-23-1024 2 In-Frame Inter-chr q21.32 p13.31 9050 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-SUMO1 RCC1 chr1 28834672 + SUMO1 chr2 203079157 - Exonic hg19 OV TCGA-23-1024 2 5'UTR-CDS Inter-chr p35.3 q33.1 9051 ChimerSeq FusionScan TCGA_RNA-Seq EYA3-DNAJC8 EYA3 chr1 28415034 - DNAJC8 chr1 28541507 - Exonic hg19 OV TCGA-23-1024 2 5'UTR-CDS Intra-chr p35.3 p35.3 9052 ChimerSeq FusionScan TCGA_RNA-Seq NMRAL1-PRKCB NMRAL1 chr16 4516153 - PRKCB chr16 24231281 + Exonic hg19 OV TCGA-61-1907 4 Out-of-Frame Intra-chr p13.3 p12.2 Tumor suppressor gene Seq+ 9053 ChimerSeq FusionScan TCGA_RNA-Seq NCAPD2-SEPT9 NCAPD2 chr12 6604391 + SEPT9 chr17 75483505 + Exonic hg19 OV TCGA-13-1489 2 In-Frame Inter-chr p13.31 9054 ChimerSeq FusionScan TCGA_RNA-Seq TRIP12-MFI2 TRIP12 chr2 230642030 - MFI2 chr3 196730970 - Exonic hg19 OV TCGA-13-1489 2 In-Frame Inter-chr q36.3 9055 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R12A-PRKCA PPP1R12A chr12 80187642 - PRKCA chr17 64799990 + Exonic hg19 OV TCGA-13-1489 2 In-Frame Inter-chr q21.31 q24.2 9056 ChimerSeq FusionScan TCGA_RNA-Seq ORMDL1-GNAI3 ORMDL1 chr2 190648994 - GNAI3 chr1 110116358 + Exonic hg19 OV TCGA-13-1489 2 5'UTR-CDS Inter-chr q32.2 p13.3 9057 ChimerSeq FusionScan TCGA_RNA-Seq SEPT9-SRSF2 SEPT9 chr17 75277636 + SRSF2 chr17 74732546 - Exonic hg19 OV TCGA-13-1489 2 Out-of-Frame Intra-chr q25.1 Oncogene 9058 ChimerSeq FusionScan TCGA_RNA-Seq C21orf90-ADAM32 C21orf90 chr21 45937718 + ADAM32 chr8 39114705 + Exonic hg19 OV TCGA-13-1489 2 5'UTR-CDS Inter-chr 9059 ChimerSeq FusionScan TCGA_RNA-Seq CASC1-ST8SIA1 CASC1 chr12 25348009 - ST8SIA1 chr12 22408323 - Exonic hg19 OV TCGA-13-1489 2 In-Frame Intra-chr p12.1 Tumor suppressor gene p12.1 9060 ChimerSeq FusionScan TCGA_RNA-Seq SAFB-RFX2 SAFB chr19 5626500 + RFX2 chr19 6047515 - Exonic hg19 OV TCGA-OY-A56P 5 5'UTR-5'UTR Intra-chr p13.3 Tumor suppressor gene Transcription factor p13.3 Transcription factor Seq+ 9061 ChimerSeq FusionScan TCGA_RNA-Seq ANO6-PKP2 ANO6 chr12 45771896 + PKP2 chr12 32955490 - Exonic hg19 OV TCGA-OY-A56P 3 Out-of-Frame Intra-chr q12 p11.21 Seq+ 9062 ChimerSeq FusionScan TCGA_RNA-Seq PTPN1-SLC9A8 PTPN1 chr20 49127127 + SLC9A8 chr20 48456077 + Exonic hg19 OV TCGA-OY-A56P 2 Out-of-Frame Intra-chr q13.13 Tumor suppressor gene q13.13 Seq+ 9063 ChimerSeq FusionScan TCGA_RNA-Seq LRRC8E-TNPO2 LRRC8E chr19 7953485 + TNPO2 chr19 12826553 - Exonic hg19 OV TCGA-OY-A56P 2 5'UTR-CDS Intra-chr p13.2 p13.13 9064 ChimerSeq FusionScan TCGA_RNA-Seq ETNK1-MYO9B ETNK1 chr12 22778520 + MYO9B chr19 17298743 + Exonic hg19 OV TCGA-OY-A56P 2 In-Frame Inter-chr p12.1 p13.11 Seq+ 9065 ChimerSeq FusionScan TCGA_RNA-Seq PDCD10-CNKSR2 PDCD10 chr3 167452593 - CNKSR2 chrX 21627188 + Exonic hg19 OV TCGA-59-2354 5 5'UTR-CDS Inter-chr q26.1 p22.12 Seq+ 9066 ChimerSeq FusionScan TCGA_RNA-Seq PDCD10-CNKSR2 PDCD10 chr3 167452593 - CNKSR2 chrX 21666948 + Exonic hg19 OV TCGA-59-2354 4 5'UTR-CDS Inter-chr q26.1 p22.12 Seq+ 9067 ChimerSeq FusionScan TCGA_RNA-Seq CCDC125-SMN2 CCDC125 chr5 68588014 - SMN2 chr5 69363120 + Exonic hg19 OV TCGA-59-2354 4 Out-of-Frame Intra-chr 9068 ChimerSeq FusionScan TCGA_RNA-Seq SIPA1L1-TRAM1 SIPA1L1 chr14 71996087 + TRAM1 chr8 71487240 - Exonic hg19 OV TCGA-59-2354 2 5'UTR-CDS Inter-chr q24.2 q13.3 9069 ChimerSeq FusionScan TCGA_RNA-Seq MAST2-TSPAN1 MAST2 chr1 46295253 + TSPAN1 chr1 46649862 + Exonic hg19 OV TCGA-59-2354 2 In-Frame Intra-chr p34.1 AGC:MAST p34.1 9070 ChimerSeq FusionScan TCGA_RNA-Seq STOML2-B2M STOML2 chr9 35101706 - B2M chr15 45008526 + Exonic hg19 OV TCGA-59-2354 2 Out-of-Frame Inter-chr p13.3 Oncogene 9071 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175394270 - Exonic hg19 OV TCGA-59-2354 2 5'UTR-CDS Inter-chr q21.1 q35.2 9072 ChimerSeq FusionScan TCGA_RNA-Seq RBM26-ATG5 RBM26 chr13 79979838 - ATG5 chr6 106649964 - Exonic hg19 OV TCGA-59-2354 2 Out-of-Frame Inter-chr q31.1 q21 9073 ChimerSeq FusionScan TCGA_RNA-Seq NUP62-ATF5 NUP62 chr19 50432582 - ATF5 chr19 50435678 + Exonic hg19 OV TCGA-59-2354 2 5'UTR-CDS Intra-chr q13.33 q13.33 Transcription factor Seq+ 9074 ChimerSeq FusionScan TCGA_RNA-Seq NPLOC4-HEXDC NPLOC4 chr17 79589191 - HEXDC chr17 80386433 + Exonic hg19 OV TCGA-30-1861 10 In-Frame Intra-chr q25.3 q25.3 Seq+ 9075 ChimerSeq FusionScan TCGA_RNA-Seq TGFBR3-LRTM1 TGFBR3 chr1 92174219 - LRTM1 chr3 54959242 - Exonic hg19 OV TCGA-30-1861 6 In-Frame Inter-chr p22.1 Tumor suppressor gene p14.3 Seq+ 9076 ChimerSeq FusionScan TCGA_RNA-Seq SETD2-MRPL44 SETD2 chr3 47205343 - MRPL44 chr2 224824250 + Exonic hg19 OV TCGA-30-1861 6 In-Frame Inter-chr p21.31 Oncogene Tumor suppressor gene q36.1 Seq+ 9077 ChimerSeq FusionScan TCGA_RNA-Seq DOK5-TSHZ2 DOK5 chr20 53092551 + TSHZ2 chr20 52103682 + Exonic hg19 OV TCGA-30-1861 5 CDS-3'UTR Intra-chr q13.2 q13.2 Transcription factor Seq+ 9078 ChimerSeq FusionScan TCGA_RNA-Seq DOPEY1-C6orf162 DOPEY1 chr6 83777498 + C6orf162 chr6 88046726 + Exonic hg19 OV TCGA-30-1861 3 5'UTR-5'UTR Intra-chr q14.1 9079 ChimerSeq FusionScan TCGA_RNA-Seq VMP1-CLTC VMP1 chr17 57785109 + CLTC chr17 57771088 + Exonic hg19 OV TCGA-30-1861 3 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 9080 ChimerSeq FusionScan TCGA_RNA-Seq GANC-AP2S1 GANC chr15 42602661 + AP2S1 chr19 47342835 - Exonic hg19 OV TCGA-30-1861 2 In-Frame Inter-chr q15.1 q13.32 9081 ChimerSeq FusionScan TCGA_RNA-Seq EPC2-LYPD6B EPC2 chr2 149402739 + LYPD6B chr2 150061766 + Exonic hg19 OV TCGA-30-1861 2 Out-of-Frame Intra-chr q23.1 q23.2 9082 ChimerSeq FusionScan TCGA_RNA-Seq RPS21-C10orf47 RPS21 chr20 60962444 + C10orf47 chr10 11908529 + Exonic hg19 OV TCGA-30-1861 2 3'UTR-CDS Inter-chr q13.33 9083 ChimerSeq FusionScan TCGA_RNA-Seq FAM60A-SH3BP5 FAM60A chr12 31478957 - SH3BP5 chr3 15311384 - Exonic hg19 OV TCGA-30-1861 2 5'UTR-5'UTR Inter-chr p25.1 9084 ChimerSeq FusionScan TCGA_RNA-Seq GAS5-MAN2B1 GAS5 chr1 173836128 - MAN2B1 chr19 12760242 - Exonic hg19 OV TCGA-29-1768 2 3'UTR-CDS Inter-chr q25.1 Tumor suppressor gene p13.13 9085 ChimerSeq FusionScan TCGA_RNA-Seq ERRFI1-RERE ERRFI1 chr1 8086217 - RERE chr1 8482867 - Exonic hg19 OV TCGA-29-1768 2 5'UTR-5'UTR Intra-chr p36.23 Tumor suppressor gene p36.23 9086 ChimerSeq FusionScan TCGA_RNA-Seq CDC25A-PRKAR2A CDC25A chr3 48215773 - PRKAR2A chr3 48820525 - Exonic hg19 OV TCGA-36-1575 8 In-Frame Intra-chr p21.31 p21.31 Seq+ 9087 ChimerSeq FusionScan TCGA_RNA-Seq BUB1B-EIF2AK4 BUB1B chr15 40462882 + EIF2AK4 chr15 40284375 + Exonic hg19 OV TCGA-36-1575 7 In-Frame Intra-chr q15.1 Oncogene q15.1 Seq+ 9088 ChimerSeq FusionScan TCGA_RNA-Seq FAM129B-PTGES FAM129B chr9 130331098 - PTGES chr9 132515344 - Exonic hg19 OV TCGA-36-1575 6 CDS-5'UTR Intra-chr q34.11 q34.11 Seq+ 9089 ChimerSeq FusionScan TCGA_RNA-Seq KANSL3-ANKRD36 KANSL3 chr2 97297048 - ANKRD36 chr2 97930065 + Exonic hg19 OV TCGA-36-1575 5 3'UTR-3'UTR Intra-chr q11.2 q11.2 Seq+ 9090 ChimerSeq FusionScan TCGA_RNA-Seq ACD-RAB11FIP3 ACD chr16 67693604 - RAB11FIP3 chr16 546823 + Exonic hg19 OV TCGA-36-1575 4 Out-of-Frame Intra-chr q22.1 9091 ChimerSeq FusionScan TCGA_RNA-Seq TMX2-CTNND1 TMX2 chr11 57505140 + CTNND1 chr11 57558856 + Exonic hg19 OV TCGA-36-1575 3 5'UTR-5'UTR Intra-chr q12.1 q12.1 Tumor suppressor gene 9092 ChimerSeq FusionScan TCGA_RNA-Seq MTMR3-ZNRF3 MTMR3 chr22 30279348 + ZNRF3 chr22 29383063 + Exonic hg19 OV TCGA-36-1575 2 5'UTR-5'UTR Intra-chr q12.2 q12.1 Seq+ 9093 ChimerSeq FusionScan TCGA_RNA-Seq MEGF9-FNBP1 MEGF9 chr9 123476035 - FNBP1 chr9 132652825 - Exonic hg19 OV TCGA-36-1575 2 In-Frame Intra-chr q33.2 q34.11 9094 ChimerSeq FusionScan TCGA_RNA-Seq BICD2-IPPK BICD2 chr9 95477534 - IPPK chr9 95420963 - Exonic hg19 OV TCGA-36-1575 2 In-Frame Intra-chr q22.31 q22.31 9095 ChimerSeq FusionScan TCGA_RNA-Seq FLJ31306-C14orf37 FLJ31306 chr14 58758352 - C14orf37 chr14 58606132 - Exonic hg19 OV TCGA-36-1575 2 3'UTR-5'UTR Intra-chr q23.1 Seq+ 9096 ChimerSeq FusionScan TCGA_RNA-Seq PCBP2-AMHR2 PCBP2 chr12 53848653 + AMHR2 chr12 53819238 + Exonic hg19 OV TCGA-36-1575 2 Out-of-Frame Intra-chr q13.13 q13.13 Seq+ 9097 ChimerSeq FusionScan TCGA_RNA-Seq RAD52-C19orf42 RAD52 chr12 1040385 - C19orf42 chr19 16758072 - Exonic hg19 OV TCGA-36-1575 2 Out-of-Frame Inter-chr p13.33 9098 ChimerSeq FusionScan TCGA_RNA-Seq TTC27-LTBP1 TTC27 chr2 33012216 + LTBP1 chr2 33335648 + Exonic hg19 OV TCGA-36-1575 2 Out-of-Frame Intra-chr p22.3 p22.3 9099 ChimerSeq FusionScan TCGA_RNA-Seq MAN1A2-TTF2 MAN1A2 chr1 117963271 + TTF2 chr1 117622189 + Exonic hg19 OV TCGA-13-0760 13 In-Frame Intra-chr p12 p13.1 Seq+ 9100 ChimerSeq FusionScan TCGA_RNA-Seq LPP-F2 LPP chr3 188059507 + F2 chr11 46741251 + Exonic hg19 OV TCGA-13-0760 12 5'UTR-CDS Inter-chr q27.3 Oncogene p11.2 Seq+ 9101 ChimerSeq FusionScan TCGA_RNA-Seq PARVB-SAMM50 PARVB chr22 44420331 + SAMM50 chr22 44392217 + Exonic hg19 OV TCGA-13-0760 9 Out-of-Frame Intra-chr q13.31 q13.31 Seq+ 9102 ChimerSeq FusionScan TCGA_RNA-Seq MCCC1-RAD51B MCCC1 chr3 182763200 - RAD51B chr14 68758600 + Exonic hg19 OV TCGA-13-0760 7 In-Frame Inter-chr q27.1 q24.1 Seq+ 9103 ChimerSeq FusionScan TCGA_RNA-Seq SLC10A7-TTC29 SLC10A7 chr4 147438189 - TTC29 chr4 147628703 - Exonic hg19 OV TCGA-13-0760 6 Out-of-Frame Intra-chr q31.22 q31.22 Seq+ 9104 ChimerSeq FusionScan TCGA_RNA-Seq IRF9-GCFC1 IRF9 chr14 24630547 + GCFC1 chr21 34113933 - Exonic hg19 OV TCGA-13-0760 5 5'UTR-CDS Inter-chr q12 Transcription factor 9105 ChimerSeq FusionScan TCGA_RNA-Seq XAF1-ROR1 XAF1 chr17 6665559 + ROR1 chr1 64643110 + Exonic hg19 OV TCGA-13-0760 3 In-Frame Inter-chr p13.1 Tumor suppressor gene p31.3 TK:Ror 9106 ChimerSeq FusionScan TCGA_RNA-Seq SNX10-CBX3 SNX10 chr7 26331706 + CBX3 chr7 26245987 + Exonic hg19 OV TCGA-13-0760 3 5'UTR-CDS Intra-chr p15.2 p15.2 9107 ChimerSeq FusionScan TCGA_RNA-Seq TRAPPC9-PTK2 TRAPPC9 chr8 141370148 - PTK2 chr8 141669777 - Exonic hg19 OV TCGA-13-0760 3 Out-of-Frame Intra-chr q24.3 q24.3 Seq+ 9108 ChimerSeq FusionScan TCGA_RNA-Seq PAIP1-FBXO38 PAIP1 chr5 43533839 - FBXO38 chr5 147817894 + Exonic hg19 OV TCGA-13-0760 3 In-Frame Intra-chr p12 q32 9109 ChimerSeq FusionScan TCGA_RNA-Seq SNX29-DERA SNX29 chr16 12070670 + DERA chr12 16135241 + Exonic hg19 OV TCGA-13-0760 3 In-Frame Inter-chr p13.13 p12.3 Seq+ 9110 ChimerSeq FusionScan TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61665879 - ANK3 chr10 61802517 - Exonic hg19 OV TCGA-13-0760 3 In-Frame Intra-chr q21.2 q21.2 Seq+ 9111 ChimerSeq FusionScan TCGA_RNA-Seq PRKAG2-ORC5 PRKAG2 chr7 151329154 - ORC5 chr7 103808973 - Exonic hg19 OV TCGA-13-0760 3 Out-of-Frame Intra-chr q36.1 q22.2 Seq+ 9112 ChimerSeq FusionScan TCGA_RNA-Seq MSLN-BICD1 MSLN chr16 811174 + BICD1 chr12 32530473 + Exonic hg19 OV TCGA-13-0760 2 5'UTR-CDS Inter-chr p13.3 p11.21 9113 ChimerSeq FusionScan TCGA_RNA-Seq STK10-PCBD2 STK10 chr5 171583627 - PCBD2 chr5 134294729 + Exonic hg19 OV TCGA-13-0760 2 In-Frame Intra-chr q35.1 Tumor suppressor gene q31.1 9114 ChimerSeq FusionScan TCGA_RNA-Seq FBXL8-CCDC159 FBXL8 chr16 67195840 + CCDC159 chr19 11464126 + Exonic hg19 OV TCGA-13-0760 2 Out-of-Frame Inter-chr q22.1 p13.2 9115 ChimerSeq FusionScan TCGA_RNA-Seq EIF2C2-SLC45A4 EIF2C2 chr8 141645583 - SLC45A4 chr8 142231864 - Exonic hg19 OV TCGA-13-0760 2 In-Frame Intra-chr q24.3 9116 ChimerSeq FusionScan TCGA_RNA-Seq ZNF160-EPN1 ZNF160 chr19 53589514 - EPN1 chr19 56196761 + Exonic hg19 OV TCGA-13-0760 2 In-Frame Intra-chr q13.42 Transcription factor q13.42 9117 ChimerSeq FusionScan TCGA_RNA-Seq TRIM35-PRPF38B TRIM35 chr8 27151596 - PRPF38B chr1 109241225 + Exonic hg19 OV TCGA-13-0760 2 In-Frame Inter-chr p21.2 Tumor suppressor gene p13.3 9118 ChimerSeq FusionScan TCGA_RNA-Seq MPG-MTCP1NB MPG chr16 133255 + MTCP1NB chrX 154292308 - Exonic hg19 OV TCGA-13-0760 2 CDS-5'UTR Inter-chr p13.3 9119 ChimerSeq FusionScan TCGA_RNA-Seq ASCC2-CCNL2 ASCC2 chr22 30221075 - CCNL2 chr1 1326245 - Exonic hg19 OV TCGA-13-0760 2 Out-of-Frame Inter-chr q12.2 p36.33 9120 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT6 NDUFA11 chr19 5896463 - FUT6 chr19 5832590 - Exonic hg19 OV TCGA-13-0760 2 CDS-5'UTR Intra-chr p13.3 p13.3 9121 ChimerSeq FusionScan TCGA_RNA-Seq DTX2-ZP3 DTX2 chr7 76093026 + ZP3 chr7 76069566 + Exonic hg19 OV TCGA-13-0765 24 5'UTR-CDS Intra-chr q11.23 Seq+ 9122 ChimerSeq FusionScan TCGA_RNA-Seq PAIP2-UBE2D2 PAIP2 chr5 138677669 + UBE2D2 chr5 138979956 + Exonic hg19 OV TCGA-13-0765 9 5'UTR-5'UTR Intra-chr q31.2 Tumor suppressor gene q31.2 Seq+ 9123 ChimerSeq FusionScan TCGA_RNA-Seq REC8-RNF31 REC8 chr14 24649112 + RNF31 chr14 24629447 + Exonic hg19 OV TCGA-13-0765 3 Out-of-Frame Intra-chr q12 q12 Seq+ 9124 ChimerSeq FusionScan TCGA_RNA-Seq DTX2-ZP3 DTX2 chr7 76091153 + ZP3 chr7 76069566 + Exonic hg19 OV TCGA-13-0765 3 5'UTR-CDS Intra-chr q11.23 Seq+ 9125 ChimerSeq FusionScan TCGA_RNA-Seq TNRC6A-LCMT1 TNRC6A chr16 24741621 + LCMT1 chr16 25139795 + Exonic hg19 OV TCGA-13-0765 2 In-Frame Intra-chr p12.1 p12.1 Seq+ 9126 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC17-SERINC2 ZCCHC17 chr1 31821821 + SERINC2 chr1 31883231 + Exonic hg19 OV TCGA-13-0765 2 In-Frame Intra-chr p35.2 p35.2 9127 ChimerSeq FusionScan TCGA_RNA-Seq ROR1-ALG6 ROR1 chr1 64516388 + ALG6 chr1 63867924 + Exonic hg19 OV TCGA-13-0765 2 In-Frame Intra-chr p31.3 TK:Ror p31.3 Seq+ 9128 ChimerSeq FusionScan TCGA_RNA-Seq ZNF644-ALG14 ZNF644 chr1 91447866 - ALG14 chr1 95492816 - Exonic hg19 OV TCGA-13-0765 2 Out-of-Frame Intra-chr p22.2 Transcription factor p21.3 9129 ChimerSeq FusionScan TCGA_RNA-Seq LIPH-VPS8 LIPH chr3 185270210 - VPS8 chr3 184766266 + Exonic hg19 OV TCGA-13-0765 2 Out-of-Frame Intra-chr q27.2 q27.2 9130 ChimerSeq FusionScan TCGA_RNA-Seq MRPL9-CYBA MRPL9 chr1 151734580 - CYBA chr16 88712605 - Exonic hg19 OV TCGA-13-0765 2 Out-of-Frame Inter-chr q21.3 q24.2 9131 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-CD47 CPSF6 chr12 69656342 + CD47 chr3 107766139 - Exonic hg19 OV TCGA-13-0765 2 3'UTR-CDS Inter-chr q15 q13.12 9132 ChimerSeq FusionScan TCGA_RNA-Seq TNRC6A-LCMT1 TNRC6A chr16 24762134 + LCMT1 chr16 25139795 + Exonic hg19 OV TCGA-13-0765 2 Out-of-Frame Intra-chr p12.1 p12.1 Seq+ 9133 ChimerSeq FusionScan TCGA_RNA-Seq ZNF772-CYP4F2 ZNF772 chr19 57988001 - CYP4F2 chr19 16003392 - Exonic hg19 OV TCGA-61-2003 2 CDS-5'UTR Intra-chr q13.43 Transcription factor p13.12 Seq+ 9134 ChimerSeq FusionScan TCGA_RNA-Seq MYH9-USF2 MYH9 chr22 36680448 - USF2 chr19 35760348 + Exonic hg19 OV TCGA-61-2003 2 Out-of-Frame Inter-chr q12.3 Oncogene Tumor suppressor gene q13.12 Transcription factor 9135 ChimerSeq FusionScan TCGA_RNA-Seq DNM2-PRKCSH DNM2 chr19 10829079 + PRKCSH chr19 11546861 + Exonic hg19 OV TCGA-25-2399 12 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 9136 ChimerSeq FusionScan TCGA_RNA-Seq ZNF486-NUMBL ZNF486 chr19 20296891 + NUMBL chr19 41183326 - Exonic hg19 OV TCGA-25-2399 3 Out-of-Frame Intra-chr p12 Transcription factor q13.2 9137 ChimerSeq FusionScan TCGA_RNA-Seq ZNF253-NUMBL ZNF253 chr19 19990955 + NUMBL chr19 41183326 - Exonic hg19 OV TCGA-25-2399 3 Out-of-Frame Intra-chr p13.11 Transcription factor q13.2 9138 ChimerSeq FusionScan TCGA_RNA-Seq C19orf79-STXBP2 C19orf79 chr19 7695732 + STXBP2 chr19 7703611 + Exonic hg19 OV TCGA-25-2399 2 Out-of-Frame Intra-chr p13.2 9139 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF18-INSR ARHGEF18 chr19 7460133 + INSR chr19 7267907 - Exonic hg19 OV TCGA-25-2399 2 5'UTR-CDS Intra-chr p13.2 p13.2 TK:InsR Seq+ 9140 ChimerSeq FusionScan TCGA_RNA-Seq RNF25-NHEJ1 RNF25 chr2 219530638 - NHEJ1 chr2 220012517 - Exonic hg19 OV TCGA-25-2399 2 In-Frame Intra-chr q35 q35 9141 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC17-CAPZB ZCCHC17 chr1 31811895 + CAPZB chr1 19705147 - Exonic hg19 OV TCGA-13-0924 2 In-Frame Intra-chr p35.2 p36.13 9142 ChimerSeq FusionScan TCGA_RNA-Seq AP3D1-MOB3A AP3D1 chr19 2151237 - MOB3A chr19 2085327 - Exonic hg19 OV TCGA-13-0924 2 CDS-5'UTR Intra-chr p13.3 p13.3 9143 ChimerSeq FusionScan TCGA_RNA-Seq RARA-CDK12 RARA chr17 38504716 + CDK12 chr17 37686856 + Exonic hg19 OV TCGA-3P-A9WA 17 Out-of-Frame Intra-chr q21.2 Oncogene Transcription factor q12 Oncogene Seq+ 9144 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0232-MAN2B2 KIAA0232 chr4 6878484 + MAN2B2 chr4 6610833 + Exonic hg19 OV TCGA-3P-A9WA 14 Out-of-Frame Intra-chr p16.1 p16.1 Seq+ 9145 ChimerSeq FusionScan TCGA_RNA-Seq STX18-LYAR STX18 chr4 4440120 - LYAR chr4 4288299 - Exonic hg19 OV TCGA-3P-A9WA 10 CDS-5'UTR Intra-chr p16.2 p16.3 Seq+ 9146 ChimerSeq FusionScan TCGA_RNA-Seq STX18-LYAR STX18 chr4 4440120 - LYAR chr4 4285522 - Exonic hg19 OV TCGA-3P-A9WA 9 CDS-5'UTR Intra-chr p16.2 p16.3 Seq+ 9147 ChimerSeq FusionScan TCGA_RNA-Seq RARA-CDK12 RARA chr17 38504716 + CDK12 chr17 37686883 + Exonic hg19 OV TCGA-3P-A9WA 8 Out-of-Frame Intra-chr q21.2 Oncogene Transcription factor q12 Oncogene Seq+ 9148 ChimerSeq FusionScan TCGA_RNA-Seq VDAC3-RNF24 VDAC3 chr8 42249446 + RNF24 chr20 3928926 - Exonic hg19 OV TCGA-3P-A9WA 6 5'UTR-CDS Inter-chr p11.21 p13 9149 ChimerSeq FusionScan TCGA_RNA-Seq SEMA3B-RBM6 SEMA3B chr3 50305201 + RBM6 chr3 50085677 + Exonic hg19 OV TCGA-3P-A9WA 3 5'UTR-5'UTR Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene 9150 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KC1-FLVCR1 RPS6KC1 chr1 213224851 + FLVCR1 chr1 213068327 + Exonic hg19 OV TCGA-3P-A9WA 2 Out-of-Frame Intra-chr q32.3 q32.3 9151 ChimerSeq FusionScan TCGA_RNA-Seq DUSP4-RBPMS DUSP4 chr8 29197614 - RBPMS chr8 30428153 + Exonic hg19 OV TCGA-3P-A9WA 2 CDS-3'UTR Intra-chr p12 p12 9152 ChimerSeq FusionScan TCGA_RNA-Seq LGR6-GPR37L1 LGR6 chr1 202205121 + GPR37L1 chr1 202096868 + Exonic hg19 OV TCGA-3P-A9WA 2 Out-of-Frame Intra-chr q32.1 q32.1 Seq+ 9153 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D15-E2F5 TBC1D15 chr12 72233591 + E2F5 chr8 86114381 + Exonic hg19 OV TCGA-3P-A9WA 2 In-Frame Inter-chr q21.1 q21.2 Transcription factor 9154 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0232-MAN2B2 KIAA0232 chr4 6873409 + MAN2B2 chr4 6611524 + Exonic hg19 OV TCGA-3P-A9WA 2 Out-of-Frame Intra-chr p16.1 p16.1 Seq+ 9155 ChimerSeq FusionScan TCGA_RNA-Seq UBP1-TFCP2L1 UBP1 chr3 33453072 - TFCP2L1 chr2 122004546 - Exonic hg19 OV TCGA-3P-A9WA 2 In-Frame Inter-chr p22.3 Transcription factor q14.2 Transcription factor 9156 ChimerSeq FusionScan TCGA_RNA-Seq TRPC4AP-GDF5 TRPC4AP chr20 33596466 - GDF5 chr20 34022581 - Exonic hg19 OV TCGA-3P-A9WA 2 Out-of-Frame Intra-chr q11.22 q11.22 9157 ChimerSeq FusionScan TCGA_RNA-Seq LGR6-GPR37L1 LGR6 chr1 202205121 + GPR37L1 chr1 202096868 + Exonic hg19 OV TCGA-VG-A8LO 38 Out-of-Frame Intra-chr q32.1 q32.1 Seq+ 9158 ChimerSeq FusionScan TCGA_RNA-Seq SORL1-CEP164 SORL1 chr11 121367758 + CEP164 chr11 117251329 + Exonic hg19 OV TCGA-VG-A8LO 31 In-Frame Intra-chr q24.1 q23.3 Seq+ 9159 ChimerSeq FusionScan TCGA_RNA-Seq ATP6V1H-TCEA1 ATP6V1H chr8 54742003 - TCEA1 chr8 54912610 - Exonic hg19 OV TCGA-VG-A8LO 23 In-Frame Intra-chr q11.23 q11.23 Seq+ 9160 ChimerSeq FusionScan TCGA_RNA-Seq LMBR1-PTPRN2 LMBR1 chr7 156516805 - PTPRN2 chr7 157691429 - Exonic hg19 OV TCGA-VG-A8LO 18 In-Frame Intra-chr q36.3 q36.3 Seq+ 9161 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R37-CLASRP PPP1R37 chr19 45596785 + CLASRP chr19 45570594 + Exonic hg19 OV TCGA-VG-A8LO 16 Out-of-Frame Intra-chr q13.32 q13.32 Seq+ 9162 ChimerSeq FusionScan TCGA_RNA-Seq PICALM-ME3 PICALM chr11 85707868 - ME3 chr11 86198482 - Exonic hg19 OV TCGA-VG-A8LO 15 Out-of-Frame Intra-chr q14.2 q14.2 Seq+ 9163 ChimerSeq FusionScan TCGA_RNA-Seq EPB41L4B-PTPN3 EPB41L4B chr9 112042096 - PTPN3 chr9 112153841 - Exonic hg19 OV TCGA-VG-A8LO 11 In-Frame Intra-chr q31.3 q31.3 Seq+ 9164 ChimerSeq FusionScan TCGA_RNA-Seq CPSF1-RECQL4 CPSF1 chr8 145624665 - RECQL4 chr8 145742148 - Exonic hg19 OV TCGA-VG-A8LO 10 In-Frame Intra-chr q24.3 q24.3 Oncogene Seq+ 9165 ChimerSeq FusionScan TCGA_RNA-Seq FN3K-HEXDC FN3K chr17 80693653 + HEXDC chr17 80398872 + Exonic hg19 OV TCGA-VG-A8LO 7 Out-of-Frame Intra-chr q25.3 q25.3 Seq+ 9166 ChimerSeq FusionScan TCGA_RNA-Seq SKAP1-HOXB9 SKAP1 chr17 46423266 - HOXB9 chr17 46700497 - Exonic hg19 OV TCGA-VG-A8LO 7 In-Frame Intra-chr q21.32 q21.32 Transcription factor Seq+ 9167 ChimerSeq FusionScan TCGA_RNA-Seq PPIL3-ORC2 PPIL3 chr2 201752335 - ORC2 chr2 201785862 - Exonic hg19 OV TCGA-VG-A8LO 6 Out-of-Frame Intra-chr q33.1 q33.1 9168 ChimerSeq FusionScan TCGA_RNA-Seq PICALM-ME3 PICALM chr11 85707868 - ME3 chr11 86176242 - Exonic hg19 OV TCGA-VG-A8LO 5 Out-of-Frame Intra-chr q14.2 q14.2 Seq+ 9169 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT6 NDUFA11 chr19 5896463 - FUT6 chr19 5832590 - Exonic hg19 OV TCGA-VG-A8LO 4 CDS-5'UTR Intra-chr p13.3 p13.3 9170 ChimerSeq FusionScan TCGA_RNA-Seq PARD6B-PTPN1 PARD6B chr20 49348389 + PTPN1 chr20 49177899 + Exonic hg19 OV TCGA-VG-A8LO 3 In-Frame Intra-chr q13.13 q13.13 Tumor suppressor gene Seq+ 9171 ChimerSeq FusionScan TCGA_RNA-Seq DDX10-NTM DDX10 chr11 108594189 + NTM chr11 131781457 + Exonic hg19 OV TCGA-VG-A8LO 3 Out-of-Frame Intra-chr q22.3 q25 9172 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 OV TCGA-VG-A8LO 3 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 9173 ChimerSeq FusionScan TCGA_RNA-Seq HOXB6-TEC HOXB6 chr17 46681841 - TEC chr4 48230676 - Exonic hg19 OV TCGA-VG-A8LO 3 5'UTR-5'UTR Inter-chr q21.32 Transcription factor p11 TK:Tec Tumor suppressor gene 9174 ChimerSeq FusionScan TCGA_RNA-Seq PICALM-ME3 PICALM chr11 85701292 - ME3 chr11 86198482 - Exonic hg19 OV TCGA-VG-A8LO 2 Out-of-Frame Intra-chr q14.2 q14.2 Seq+ 9175 ChimerSeq FusionScan TCGA_RNA-Seq ARPC1B-BOP1 ARPC1B chr7 98984412 + BOP1 chr8 145487599 - Exonic hg19 OV TCGA-VG-A8LO 2 In-Frame Inter-chr q22.1 q24.3 9176 ChimerSeq FusionScan TCGA_RNA-Seq GFOD2-C16orf48 GFOD2 chr16 67753065 - C16orf48 chr16 67700168 - Exonic hg19 OV TCGA-VG-A8LO 2 5'UTR-CDS Intra-chr q22.1 9177 ChimerSeq FusionScan TCGA_RNA-Seq SKAP1-HOXB7 SKAP1 chr17 46423266 - HOXB7 chr17 46685457 - Exonic hg19 OV TCGA-VG-A8LO 2 In-Frame Intra-chr q21.32 q21.32 Transcription factor Seq+ 9178 ChimerSeq FusionScan TCGA_RNA-Seq BACE2-FAM3B BACE2 chr21 42629253 + FAM3B chr21 42710304 + Exonic hg19 OV TCGA-VG-A8LO 2 In-Frame Intra-chr q22.2 q22.3 Seq+ 9179 ChimerSeq FusionScan TCGA_RNA-Seq SLC22A3-PVT1 SLC22A3 chr6 160769880 + PVT1 chr8 129108763 + Exonic hg19 OV TCGA-25-2398 2 CDS-5'UTR Inter-chr q25.3 q24.21 Seq+ 9180 ChimerSeq FusionScan TCGA_RNA-Seq NDRG1-OC90 NDRG1 chr8 134292474 - OC90 chr8 133037023 - Exonic hg19 OV TCGA-10-0938 11 Out-of-Frame Intra-chr q24.22 Tumor suppressor gene q24.22 Seq+ 9181 ChimerSeq FusionScan TCGA_RNA-Seq MRPL48-CHKA MRPL48 chr11 73519395 + CHKA chr11 67848924 - Exonic hg19 OV TCGA-10-0938 2 Out-of-Frame Intra-chr q13.4 q13.2 Seq+ 9182 ChimerSeq FusionScan TCGA_RNA-Seq ZNF43-MKL1 ZNF43 chr19 22034706 - MKL1 chr22 40990739 - Exonic hg19 OV TCGA-61-2113 2 5'UTR-5'UTR Inter-chr p12 Transcription factor q13.2 9183 ChimerSeq FusionScan TCGA_RNA-Seq MGAT3-APOBEC3F MGAT3 chr22 39853562 + APOBEC3F chr22 39438941 + Exonic hg19 OV TCGA-61-2113 2 5'UTR-CDS Intra-chr q13.1 q13.1 9184 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 OV TCGA-61-2113 2 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 9185 ChimerSeq FusionScan TCGA_RNA-Seq WDR13-TUBGCP2 WDR13 chrX 48456425 + TUBGCP2 chr10 135097506 - Exonic hg19 OV TCGA-61-2113 2 In-Frame Inter-chr p11.23 q26.3 9186 ChimerSeq FusionScan TCGA_RNA-Seq MLST8-C16orf79 MLST8 chr16 2259418 + C16orf79 chr16 2259457 - Exonic hg19 OV TCGA-61-2002 2 3'UTR-CDS Intra-chr p13.3 9187 ChimerSeq FusionScan TCGA_RNA-Seq CEP104-MDGA1 CEP104 chr1 3761470 - MDGA1 chr6 37606443 - Exonic hg19 OV TCGA-61-2002 2 Out-of-Frame Inter-chr p36.32 p21.2 9188 ChimerSeq FusionScan TCGA_RNA-Seq TMC4-CHD6 TMC4 chr19 54669152 - CHD6 chr20 40052340 - Exonic hg19 OV TCGA-61-2002 2 Out-of-Frame Inter-chr q12 9189 ChimerSeq FusionScan TCGA_RNA-Seq UBL4A-SPP1 UBL4A chrX 153714566 - SPP1 chr4 88902626 + Exonic hg19 OV TCGA-61-2002 2 Out-of-Frame Inter-chr q28 q22.1 9190 ChimerSeq FusionScan TCGA_RNA-Seq MECOM-LRRC34 MECOM chr3 169381123 - LRRC34 chr3 169526533 - Exonic hg19 OV TCGA-24-2026 10 In-Frame Intra-chr q26.2 Transcription factor q26.2 Seq+ 9191 ChimerSeq FusionScan TCGA_RNA-Seq P4HB-PCYT2 P4HB chr17 79817056 - PCYT2 chr17 79864774 - Exonic hg19 OV TCGA-24-2026 8 Out-of-Frame Intra-chr q25.3 q25.3 Seq+ 9192 ChimerSeq FusionScan TCGA_RNA-Seq MTMR3-NF2 MTMR3 chr22 30279348 + NF2 chr22 30067814 + Exonic hg19 OV TCGA-24-2026 8 5'UTR-CDS Intra-chr q12.2 q12.2 Oncogene Tumor suppressor gene Seq+ 9193 ChimerSeq FusionScan TCGA_RNA-Seq PILRB-SLC22A20 PILRB chr7 99950746 + SLC22A20 chr11 65009460 + Exonic hg19 OV TCGA-24-2026 5 5'UTR-5'UTR Inter-chr q22.1 q13.1 Seq+ 9194 ChimerSeq FusionScan TCGA_RNA-Seq WWP2-TMCO7 WWP2 chr16 69820983 + TMCO7 chr16 69007930 + Exonic hg19 OV TCGA-24-2026 5 In-Frame Intra-chr q22.1 Seq+ 9195 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 OV TCGA-24-2026 4 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 9196 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD33B-ADAMTS16 ANKRD33B chr5 10564945 + ADAMTS16 chr5 5232480 + Exonic hg19 OV TCGA-24-2026 4 In-Frame Intra-chr p15.2 p15.32 Seq+ 9197 ChimerSeq FusionScan TCGA_RNA-Seq SS18-CHST9 SS18 chr18 23619252 - CHST9 chr18 24524330 - Exonic hg19 OV TCGA-24-2026 4 In-Frame Intra-chr q11.2 q11.2 Seq+ 9198 ChimerSeq FusionScan TCGA_RNA-Seq FAM222B-SEZ6 FAM222B chr17 27161310 - SEZ6 chr17 27306831 - Exonic hg19 OV TCGA-24-2026 4 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 9199 ChimerSeq FusionScan TCGA_RNA-Seq SS18-CHST9 SS18 chr18 23619252 - CHST9 chr18 24497314 - Exonic hg19 OV TCGA-24-2026 3 In-Frame Intra-chr q11.2 q11.2 Seq+ 9200 ChimerSeq FusionScan TCGA_RNA-Seq ASH1L-C1orf85 ASH1L chr1 155365249 - C1orf85 chr1 156264356 - Exonic hg19 OV TCGA-24-2026 3 Out-of-Frame Intra-chr q22 Transcription factor 9201 ChimerSeq FusionScan TCGA_RNA-Seq ST5-SBF2 ST5 chr11 8772167 - SBF2 chr11 9817504 - Exonic hg19 OV TCGA-24-2026 3 Out-of-Frame Intra-chr p15.4 Tumor suppressor gene p15.4 9202 ChimerSeq FusionScan TCGA_RNA-Seq TMEM179B-SCGB1D1 TMEM179B chr11 62554999 + SCGB1D1 chr11 61959527 + Exonic hg19 OV TCGA-24-2026 3 Out-of-Frame Intra-chr q12.3 q12.3 Seq+ 9203 ChimerSeq FusionScan TCGA_RNA-Seq NR6A1-GOLGA1 NR6A1 chr9 127495586 - GOLGA1 chr9 127662826 - Exonic hg19 OV TCGA-24-2026 3 Out-of-Frame Intra-chr q33.3 Transcription factor q33.3 Seq+ 9204 ChimerSeq FusionScan TCGA_RNA-Seq EPB41L1-ROMO1 EPB41L1 chr20 34785963 + ROMO1 chr20 34287554 + Exonic hg19 OV TCGA-24-2026 3 CDS-5'UTR Intra-chr q11.23 q11.22 Seq+ 9205 ChimerSeq FusionScan TCGA_RNA-Seq ERBB4-IKZF2 ERBB4 chr2 212812154 - IKZF2 chr2 213921823 - Exonic hg19 OV TCGA-24-2026 3 In-Frame Intra-chr q34 Oncogene Tumor suppressor gene q34 Tumor suppressor gene Transcription factor 9206 ChimerSeq FusionScan TCGA_RNA-Seq YAP1-PPP1CB YAP1 chr11 102033302 + PPP1CB chr2 28974903 + Exonic hg19 OV TCGA-24-2026 2 CDS-5'UTR Inter-chr q22.1 Tumor suppressor gene p23.2 9207 ChimerSeq FusionScan TCGA_RNA-Seq MATR3-HP1BP3 MATR3 chr5 138655190 + HP1BP3 chr1 21103243 - Exonic hg19 OV TCGA-24-2026 2 Out-of-Frame Inter-chr q31.2 p36.12 9208 ChimerSeq FusionScan TCGA_RNA-Seq FRG1-RABGEF1 FRG1 chr4 190864427 + RABGEF1 chr7 66273872 + Exonic hg19 OV TCGA-24-2026 2 Out-of-Frame Inter-chr q11.21 9209 ChimerSeq FusionScan TCGA_RNA-Seq SLC39A11-LINC00469 SLC39A11 chr17 70943890 - LINC00469 chr17 71757165 - Exonic hg19 OV TCGA-24-2026 2 CDS-3'UTR Intra-chr q25.1 q25.1 9210 ChimerSeq FusionScan TCGA_RNA-Seq ENY2-APPL1 ENY2 chr8 110352792 + APPL1 chr3 57293055 + Exonic hg19 OV TCGA-24-2026 2 Out-of-Frame Inter-chr q23.1 p14.3 9211 ChimerSeq FusionScan TCGA_RNA-Seq SLC39A11-LINC00469 SLC39A11 chr17 70943869 - LINC00469 chr17 71757165 - Exonic hg19 OV TCGA-24-2026 2 CDS-3'UTR Intra-chr q25.1 q25.1 9212 ChimerSeq FusionScan TCGA_RNA-Seq RAD51B-MPP5 RAD51B chr14 68353921 + MPP5 chr14 67770238 + Exonic hg19 OV TCGA-24-2026 2 In-Frame Intra-chr q24.1 q23.3 9213 ChimerSeq FusionScan TCGA_RNA-Seq B3GNT2-KIAA1841 B3GNT2 chr2 62423490 + KIAA1841 chr2 61308586 + Exonic hg19 OV TCGA-24-2026 2 5'UTR-CDS Intra-chr p15 p15 9214 ChimerSeq FusionScan TCGA_RNA-Seq PPP3R1-C1D PPP3R1 chr2 68444223 - C1D chr2 68280269 - Exonic hg19 OV TCGA-24-2026 2 CDS-5'UTR Intra-chr p14 p14 Seq+ 9215 ChimerSeq FusionScan TCGA_RNA-Seq PAIP1-DAB2 PAIP1 chr5 43555931 - DAB2 chr5 39375186 - Exonic hg19 OV TCGA-13-1506 13 In-Frame Intra-chr p12 p13.1 Tumor suppressor gene Seq+ 9216 ChimerSeq FusionScan TCGA_RNA-Seq FLOT2-MYO18A FLOT2 chr17 27224543 - MYO18A chr17 27422077 - Exonic hg19 OV TCGA-13-1506 5 Out-of-Frame Intra-chr q11.2 q11.2 Oncogene Seq+ 9217 ChimerSeq FusionScan TCGA_RNA-Seq ZMYND8-EYA2 ZMYND8 chr20 45852969 - EYA2 chr20 45700823 + Exonic hg19 OV TCGA-13-1506 5 In-Frame Intra-chr q13.12 q13.12 Seq+ 9218 ChimerSeq FusionScan TCGA_RNA-Seq TPM3-FAM193A TPM3 chr1 154155463 - FAM193A chr4 2733501 + Exonic hg19 OV TCGA-13-1506 5 Out-of-Frame Inter-chr q21.3 p16.3 Seq+ 9219 ChimerSeq FusionScan TCGA_RNA-Seq MAP4-SPINK8 MAP4 chr3 48130262 - SPINK8 chr3 48351436 - Exonic hg19 OV TCGA-13-1506 3 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 9220 ChimerSeq FusionScan TCGA_RNA-Seq XPR1-LHX4 XPR1 chr1 180651547 + LHX4 chr1 180217419 + Exonic hg19 OV TCGA-13-1506 3 In-Frame Intra-chr q25.3 q25.2 Tumor suppressor gene Transcription factor Seq+ 9221 ChimerSeq FusionScan TCGA_RNA-Seq SFSWAP-ALG9 SFSWAP chr12 132195992 + ALG9 chr11 111728460 - Exonic hg19 OV TCGA-13-1506 2 Out-of-Frame Inter-chr q24.33 q23.1 9222 ChimerSeq FusionScan TCGA_RNA-Seq TRIM2-ARFIP1 TRIM2 chr4 154125712 + ARFIP1 chr4 153831215 + Exonic hg19 OV TCGA-13-1506 2 In-Frame Intra-chr q31.3 q31.3 Seq+ 9223 ChimerSeq FusionScan TCGA_RNA-Seq CSNK1A1-PDE6A CSNK1A1 chr5 148899852 - PDE6A chr5 149242829 - Exonic hg19 OV TCGA-13-1506 2 In-Frame Intra-chr q32 Tumor suppressor gene q32 Seq+ 9224 ChimerSeq FusionScan TCGA_RNA-Seq ATF7IP2-STYXL1 ATF7IP2 chr16 10479979 + STYXL1 chr7 75634722 - Exonic hg19 OV TCGA-24-1558 19 5'UTR-CDS Inter-chr p13.2 q11.23 Seq+ 9225 ChimerSeq FusionScan TCGA_RNA-Seq ZNF20-DAND5 ZNF20 chr19 12250994 - DAND5 chr19 13084202 + Exonic hg19 OV TCGA-24-1558 18 In-Frame Intra-chr p13.2 Transcription factor p13.13 Seq+ 9226 ChimerSeq FusionScan TCGA_RNA-Seq ZNF791-ETHE1 ZNF791 chr19 12721896 + ETHE1 chr19 44015718 - Exonic hg19 OV TCGA-24-1558 17 In-Frame Intra-chr p13.13 Transcription factor q13.31 Seq+ 9227 ChimerSeq FusionScan TCGA_RNA-Seq ATF7IP2-STYXL1 ATF7IP2 chr16 10479979 + STYXL1 chr7 75643205 - Exonic hg19 OV TCGA-24-1558 13 5'UTR-CDS Inter-chr p13.2 q11.23 Seq+ 9228 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD11-KLHL32 ANKRD11 chr16 89556652 - KLHL32 chr6 97489367 + Exonic hg19 OV TCGA-24-1558 12 5'UTR-CDS Inter-chr q24.3 q16.1 Seq+ 9229 ChimerSeq FusionScan TCGA_RNA-Seq ZNF607-ARMC5 ZNF607 chr19 38198814 - ARMC5 chr16 31473242 + Exonic hg19 OV TCGA-24-1558 11 In-Frame Inter-chr q13.12 Transcription factor p11.2 Tumor suppressor gene Seq+ 9230 ChimerSeq FusionScan TCGA_RNA-Seq URI1-XRCC1 URI1 chr19 30433571 + XRCC1 chr19 44065172 - Exonic hg19 OV TCGA-24-1558 11 In-Frame Intra-chr q12 q13.31 Seq+ 9231 ChimerSeq FusionScan TCGA_RNA-Seq PLD3-CD79A PLD3 chr19 40873786 + CD79A chr19 42383059 + Exonic hg19 OV TCGA-24-1558 8 Out-of-Frame Intra-chr q13.2 q13.2 Oncogene Seq+ 9232 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R37-PAFAH1B3 PPP1R37 chr19 45596785 + PAFAH1B3 chr19 42806477 - Exonic hg19 OV TCGA-24-1558 8 CDS-5'UTR Intra-chr q13.32 q13.2 Seq+ 9233 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R37-RHPN2 PPP1R37 chr19 45596785 + RHPN2 chr19 33535270 - Exonic hg19 OV TCGA-24-1558 6 Out-of-Frame Intra-chr q13.32 q13.11 Seq+ 9234 ChimerSeq FusionScan TCGA_RNA-Seq MTPAP-ALKBH3 MTPAP chr10 30611319 - ALKBH3 chr11 43940587 + Exonic hg19 OV TCGA-24-1558 6 Out-of-Frame Inter-chr p11.23 p11.2 Seq+ 9235 ChimerSeq FusionScan TCGA_RNA-Seq ZSWIM4-ZNF540 ZSWIM4 chr19 13915962 + ZNF540 chr19 38089276 + Exonic hg19 OV TCGA-24-1558 4 CDS-5'UTR Intra-chr p13.13 q13.12 Transcription factor Seq+ 9236 ChimerSeq FusionScan TCGA_RNA-Seq ALDH9A1-TMCO1 ALDH9A1 chr1 165667614 - TMCO1 chr1 165697358 - Exonic hg19 OV TCGA-24-1558 3 Out-of-Frame Intra-chr q24.1 q24.1 Seq+ 9237 ChimerSeq FusionScan TCGA_RNA-Seq TMX2-CTNND1 TMX2 chr11 57505140 + CTNND1 chr11 57561481 + Exonic hg19 OV TCGA-24-1558 2 Out-of-Frame Intra-chr q12.1 q12.1 Tumor suppressor gene 9238 ChimerSeq FusionScan TCGA_RNA-Seq HIP1-STYXL1 HIP1 chr7 75368118 - STYXL1 chr7 75634722 - Exonic hg19 OV TCGA-24-1558 2 In-Frame Intra-chr q11.23 q11.23 Seq+ 9239 ChimerSeq FusionScan TCGA_RNA-Seq URI1-XRCC1 URI1 chr19 30433571 + XRCC1 chr19 44058956 - Exonic hg19 OV TCGA-24-1558 2 In-Frame Intra-chr q12 q13.31 Seq+ 9240 ChimerSeq FusionScan TCGA_RNA-Seq SLC39A10-C9orf3 SLC39A10 chr2 196522005 + C9orf3 chr9 97848963 + Exonic hg19 OV TCGA-24-1558 2 5'UTR-3'UTR Inter-chr q32.3 q22.32 9241 ChimerSeq FusionScan TCGA_RNA-Seq YWHAE-C14orf43 YWHAE chr17 1303340 - C14orf43 chr14 74206958 - Exonic hg19 OV TCGA-24-1558 2 CDS-5'UTR Inter-chr p13.3 9242 ChimerSeq FusionScan TCGA_RNA-Seq NEO1-CNRIP1 NEO1 chr15 73428368 + CNRIP1 chr2 68521158 - Exonic hg19 OV TCGA-25-1326 17 Out-of-Frame Inter-chr q24.1 p14 Seq+ 9243 ChimerSeq FusionScan TCGA_RNA-Seq DHX30-NT5DC2 DHX30 chr3 47870624 + NT5DC2 chr3 52562327 - Exonic hg19 OV TCGA-25-1326 15 In-Frame Intra-chr p21.31 p21.1 Seq+ 9244 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC2-PSMC2 DNAJC2 chr7 102978182 - PSMC2 chr7 102996140 + Exonic hg19 OV TCGA-25-1326 2 In-Frame Intra-chr q22.1 q22.1 Seq+ 9245 ChimerSeq FusionScan TCGA_RNA-Seq NEO1-CNRIP1 NEO1 chr15 73428368 + CNRIP1 chr2 68511616 - Exonic hg19 OV TCGA-25-1326 2 Out-of-Frame Inter-chr q24.1 p14 Seq+ 9246 ChimerSeq FusionScan TCGA_RNA-Seq FAM53B-LY86 FAM53B chr10 126384726 - LY86 chr6 6654776 + Exonic hg19 OV TCGA-25-1326 2 Out-of-Frame Inter-chr q26.13 p25.1 Seq+ 9247 ChimerSeq FusionScan TCGA_RNA-Seq PTBP1-FGF22 PTBP1 chr19 808762 + FGF22 chr19 643234 + Exonic hg19 OV TCGA-25-1326 2 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 9248 ChimerSeq FusionScan TCGA_RNA-Seq USP18-FLJ41941 USP18 chr22 18644702 + FLJ41941 chr22 18518525 + Exonic hg19 OV TCGA-24-1436 10 CDS-5'UTR Intra-chr q11.21 9249 ChimerSeq FusionScan TCGA_RNA-Seq ZFP82-POLR2I ZFP82 chr19 36900682 - POLR2I chr19 36605615 - Exonic hg19 OV TCGA-24-1436 5 Out-of-Frame Intra-chr q13.12 Tumor suppressor gene Transcription factor q13.12 9250 ChimerSeq FusionScan TCGA_RNA-Seq INTS4-ALG8 INTS4 chr11 77602364 - ALG8 chr11 77817992 - Exonic hg19 OV TCGA-24-1436 5 In-Frame Intra-chr q14.1 q14.1 Seq+ 9251 ChimerSeq FusionScan TCGA_RNA-Seq ZFP82-POLR2I ZFP82 chr19 36900682 - POLR2I chr19 36605314 - Exonic hg19 OV TCGA-24-1436 4 In-Frame Intra-chr q13.12 Tumor suppressor gene Transcription factor q13.12 9252 ChimerSeq FusionScan TCGA_RNA-Seq IFT172-KRTCAP3 IFT172 chr2 27669126 - KRTCAP3 chr2 27669167 + Exonic hg19 OV TCGA-24-1436 2 CDS-3'UTR Intra-chr p23.3 p23.3 9253 ChimerSeq FusionScan TCGA_RNA-Seq NOC4L-FBRSL1 NOC4L chr12 132633440 + FBRSL1 chr12 133144066 + Exonic hg19 OV TCGA-61-1721 2 Out-of-Frame Intra-chr q24.33 q24.33 9254 ChimerSeq FusionScan TCGA_RNA-Seq EMID1-CBY1 EMID1 chr22 29630338 + CBY1 chr22 39069163 + Exonic hg19 OV TCGA-04-1341 31 In-Frame Intra-chr q12.2 q13.1 Seq+ 9255 ChimerSeq FusionScan TCGA_RNA-Seq RNF11-C8A RNF11 chr1 51702551 + C8A chr1 57349153 + Exonic hg19 OV TCGA-04-1341 19 In-Frame Intra-chr p32.3 p32.2 Seq+ 9256 ChimerSeq FusionScan TCGA_RNA-Seq SLC2A1-FLJ32224 SLC2A1 chr1 43424304 - FLJ32224 chr1 43435919 + Exonic hg19 OV TCGA-04-1341 18 CDS-5'UTR Intra-chr p34.2 9257 ChimerSeq FusionScan TCGA_RNA-Seq RNF11-C8A RNF11 chr1 51702551 + C8A chr1 57347117 + Exonic hg19 OV TCGA-04-1341 15 Out-of-Frame Intra-chr p32.3 p32.2 Seq+ 9258 ChimerSeq FusionScan TCGA_RNA-Seq EIF3B-RASSF7 EIF3B chr7 2411484 + RASSF7 chr11 561761 + Exonic hg19 OV TCGA-04-1341 3 CDS-5'UTR Inter-chr p22.3 p15.5 9259 ChimerSeq FusionScan TCGA_RNA-Seq C11orf30-CAPN5 C11orf30 chr11 76239510 + CAPN5 chr11 76795897 + Exonic hg19 OV TCGA-04-1341 3 CDS-5'UTR Intra-chr q13.5 Seq+ 9260 ChimerSeq FusionScan TCGA_RNA-Seq CDC20-RRAGC CDC20 chr1 43826916 + RRAGC chr1 39311759 - Exonic hg19 OV TCGA-04-1341 3 5'UTR-CDS Intra-chr p34.2 p34.3 Seq+ 9261 ChimerSeq FusionScan TCGA_RNA-Seq NOC4L-ASPSCR1 NOC4L chr12 132630210 + ASPSCR1 chr17 79966912 + Exonic hg19 OV TCGA-04-1341 2 In-Frame Inter-chr q24.33 q25.3 9262 ChimerSeq FusionScan TCGA_RNA-Seq ANXA4-SERINC2 ANXA4 chr2 69969307 + SERINC2 chr1 31905813 + Exonic hg19 OV TCGA-04-1341 2 5'UTR-CDS Inter-chr p13.3 p35.2 9263 ChimerSeq FusionScan TCGA_RNA-Seq ZNF680-INTS4L1 ZNF680 chr7 64023302 - INTS4L1 chr7 64691918 + Exonic hg19 OV TCGA-04-1341 2 CDS-5'UTR Intra-chr q11.21 Transcription factor Seq+ 9264 ChimerSeq FusionScan TCGA_RNA-Seq HMGA2-ZNF569 HMGA2 chr12 66232349 + ZNF569 chr19 37917280 - Exonic hg19 OV TCGA-04-1341 2 In-Frame Inter-chr q14.3 Transcription factor q13.12 Transcription factor 9265 ChimerSeq FusionScan TCGA_RNA-Seq SEC23B-ALAS1 SEC23B chr20 18523046 + ALAS1 chr3 52233225 + Exonic hg19 OV TCGA-04-1341 2 CDS-5'UTR Inter-chr p11.23 p21.2 9266 ChimerSeq FusionScan TCGA_RNA-Seq ZNF680-INTS4L1 ZNF680 chr7 64023302 - INTS4L1 chr7 64693442 + Exonic hg19 OV TCGA-04-1341 2 CDS-5'UTR Intra-chr q11.21 Transcription factor Seq+ 9267 ChimerSeq FusionScan TCGA_RNA-Seq GAB2-LRRC32 GAB2 chr11 78128691 - LRRC32 chr11 76377002 - Exonic hg19 OV TCGA-09-0366 20 CDS-5'UTR Intra-chr q14.1 q13.5 Seq+ 9268 ChimerSeq FusionScan TCGA_RNA-Seq CTNNA1-KDM3B CTNNA1 chr5 138163407 + KDM3B chr5 137708362 + Exonic hg19 OV TCGA-09-0366 7 In-Frame Intra-chr q31.2 Oncogene q31.2 Tumor suppressor gene Seq+ 9269 ChimerSeq FusionScan TCGA_RNA-Seq ENSA-SEC22B ENSA chr1 150598117 - SEC22B chr1 145109523 + Exonic hg19 OV TCGA-09-0366 5 In-Frame Intra-chr q21.3 p12 Seq+ 9270 ChimerSeq FusionScan TCGA_RNA-Seq NEK6-PTGS1 NEK6 chr9 127020364 + PTGS1 chr9 125143649 + Exonic hg19 OV TCGA-09-0366 4 5'UTR-CDS Intra-chr q33.3 Other:NEK q33.2 Seq+ 9271 ChimerSeq FusionScan TCGA_RNA-Seq OLFM2-TMEM205 OLFM2 chr19 10046979 - TMEM205 chr19 11456304 - Exonic hg19 OV TCGA-09-0366 3 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 9272 ChimerSeq FusionScan TCGA_RNA-Seq POLR2D-WDR33 POLR2D chr2 128615601 - WDR33 chr2 128528578 - Exonic hg19 OV TCGA-09-0366 2 CDS-5'UTR Intra-chr q14.3 q14.3 9273 ChimerSeq FusionScan TCGA_RNA-Seq SLC25A36-CCNL2 SLC25A36 chr3 140682069 + CCNL2 chr1 1326245 - Exonic hg19 OV TCGA-09-0366 2 Out-of-Frame Inter-chr q23 p36.33 9274 ChimerSeq FusionScan TCGA_RNA-Seq UBE2K-TRAPPC6A UBE2K chr4 39757359 + TRAPPC6A chr19 45668452 - Exonic hg19 OV TCGA-09-0366 2 Out-of-Frame Inter-chr p14 q13.32 9275 ChimerSeq FusionScan TCGA_RNA-Seq SOCS6-CASP1 SOCS6 chr18 67956326 + CASP1 chr11 104897678 - Exonic hg19 OV TCGA-09-0366 2 5'UTR-CDS Inter-chr q22.2 q22.3 9276 ChimerSeq FusionScan TCGA_RNA-Seq RNF2-SEC31A RNF2 chr1 185056772 + SEC31A chr4 83770130 - Exonic hg19 OV TCGA-09-0366 2 In-Frame Inter-chr q25.3 Oncogene q21.22 9277 ChimerSeq FusionScan TCGA_RNA-Seq PAK1-IL17RA PAK1 chr11 77184596 - IL17RA chr22 17577951 + Exonic hg19 OV TCGA-09-0366 2 5'UTR-CDS Inter-chr q14.1 STE:STE20 q11.1 9278 ChimerSeq FusionScan TCGA_RNA-Seq CDC42SE2-SMYD3 CDC42SE2 chr5 130651837 + SMYD3 chr1 246093239 - Exonic hg19 OV TCGA-09-0366 2 5'UTR-CDS Inter-chr q31.1 q44 Transcription factor 9279 ChimerSeq FusionScan TCGA_RNA-Seq CISD2-ARHGEF38 CISD2 chr4 103790344 + ARHGEF38 chr4 106587333 + Exonic hg19 OV TCGA-09-0366 2 Out-of-Frame Intra-chr q24 q24 9280 ChimerSeq FusionScan TCGA_RNA-Seq AGRN-CNKSR1 AGRN chr1 989931 + CNKSR1 chr1 26514724 + Exonic hg19 OV TCGA-09-0366 2 Out-of-Frame Intra-chr p36.33 p36.11 9281 ChimerSeq FusionScan TCGA_RNA-Seq ABI2-SIRT5 ABI2 chr2 204193354 + SIRT5 chr6 13579682 + Exonic hg19 OV TCGA-09-0366 2 CDS-5'UTR Inter-chr q33.2 Tumor suppressor gene p23 9282 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-XPNPEP1 TBL1XR1 chr3 176914908 - XPNPEP1 chr10 111667573 - Exonic hg19 OV TCGA-09-0366 2 5'UTR-CDS Inter-chr q26.32 q25.1 9283 ChimerSeq FusionScan TCGA_RNA-Seq NEK6-PTGS1 NEK6 chr9 127020640 + PTGS1 chr9 125143649 + Exonic hg19 OV TCGA-09-0366 2 5'UTR-CDS Intra-chr q33.3 Other:NEK q33.2 Seq+ 9284 ChimerSeq FusionScan TCGA_RNA-Seq C19orf12-GLYATL2 C19orf12 chr19 30199160 - GLYATL2 chr11 58611997 - Exonic hg19 OV TCGA-09-0366 2 CDS-5'UTR Inter-chr q12 q12.1 Seq+ 9285 ChimerSeq FusionScan TCGA_RNA-Seq FOXP1-CYB5B FOXP1 chr3 71408300 - CYB5B chr16 69481052 + Exonic hg19 OV TCGA-09-0366 2 5'UTR-CDS Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor q22.1 9286 ChimerSeq FusionScan TCGA_RNA-Seq BTBD9-SUPT3H BTBD9 chr6 38545375 - SUPT3H chr6 44797594 - Exonic hg19 OV TCGA-61-2088 8 Out-of-Frame Intra-chr p21.2 p21.1 Seq+ 9287 ChimerSeq FusionScan TCGA_RNA-Seq C20orf94-DEFB126 C20orf94 chr20 10438879 + DEFB126 chr20 126055 + Exonic hg19 OV TCGA-61-2088 4 Out-of-Frame Intra-chr p13 9288 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT6 NDUFA11 chr19 5896463 - FUT6 chr19 5832590 - Exonic hg19 OV TCGA-61-2088 4 CDS-5'UTR Intra-chr p13.3 p13.3 9289 ChimerSeq FusionScan TCGA_RNA-Seq SOX5-NOL4 SOX5 chr12 23908571 - NOL4 chr18 31709984 - Exonic hg19 OV TCGA-61-2088 2 Out-of-Frame Inter-chr p12.1 Transcription factor q12.1 9290 ChimerSeq FusionScan TCGA_RNA-Seq NUDT3-MOCS1 NUDT3 chr6 34309638 - MOCS1 chr6 39883976 - Exonic hg19 OV TCGA-61-2088 2 Out-of-Frame Intra-chr p21.31 p21.2 Seq+ 9291 ChimerSeq FusionScan TCGA_RNA-Seq SCMH1-TRAPPC3 SCMH1 chr1 41707730 - TRAPPC3 chr1 36605767 - Exonic hg19 OV TCGA-25-2400 9 5'UTR-CDS Intra-chr p34.2 Transcription factor p34.3 Seq+ 9292 ChimerSeq FusionScan TCGA_RNA-Seq USP34-FAM178B USP34 chr2 61697784 - FAM178B chr2 97613639 - Exonic hg19 OV TCGA-25-2400 5 Out-of-Frame Intra-chr p15 q11.2 Seq+ 9293 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB20-LSAMP ZBTB20 chr3 114519947 - LSAMP chr3 115571464 - Exonic hg19 OV TCGA-24-1560 4 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.31 Tumor suppressor gene Seq+ 9294 ChimerSeq FusionScan TCGA_RNA-Seq SSRP1-MED19 SSRP1 chr11 57101936 - MED19 chr11 57472701 - Exonic hg19 OV TCGA-24-1560 4 Out-of-Frame Intra-chr q12.1 q12.1 Seq+ 9295 ChimerSeq FusionScan TCGA_RNA-Seq GLYR1-SRL GLYR1 chr16 4895074 - SRL chr16 4245787 - Exonic hg19 OV TCGA-24-1560 3 Out-of-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 9296 ChimerSeq FusionScan TCGA_RNA-Seq PNKP-ENO1 PNKP chr19 50369655 - ENO1 chr1 8921488 - Exonic hg19 OV TCGA-24-1560 3 Out-of-Frame Inter-chr q13.33 p36.23 9297 ChimerSeq FusionScan TCGA_RNA-Seq MYOF-NFYA MYOF chr10 95211806 - NFYA chr6 41046767 + Exonic hg19 OV TCGA-24-1560 2 CDS-5'UTR Inter-chr q23.33 p21.1 Transcription factor 9298 ChimerSeq FusionScan TCGA_RNA-Seq GPBP1L1-TMEM131 GPBP1L1 chr1 46151247 - TMEM131 chr2 98392481 - Exonic hg19 OV TCGA-24-1560 2 5'UTR-CDS Inter-chr p34.1 Transcription factor q11.2 9299 ChimerSeq FusionScan TCGA_RNA-Seq ZMYM4-EFTUD1 ZMYM4 chr1 35791006 + EFTUD1 chr15 82456325 - Exonic hg19 OV TCGA-24-1560 2 In-Frame Inter-chr p34.3 9300 ChimerSeq FusionScan TCGA_RNA-Seq RBM39-CPNE1 RBM39 chr20 34317233 - CPNE1 chr20 34243266 - Exonic hg19 OV TCGA-36-1581 9 3'UTR-3'UTR Intra-chr q11.22 q11.22 9301 ChimerSeq FusionScan TCGA_RNA-Seq PITPNA-PRPF8 PITPNA chr17 1444859 - PRPF8 chr17 1565447 - Exonic hg19 OV TCGA-36-1581 5 In-Frame Intra-chr p13.3 Seq+ 9302 ChimerSeq FusionScan TCGA_RNA-Seq PPP1CB-PLB1 PPP1CB chr2 28975042 + PLB1 chr2 28739674 + Exonic hg19 OV TCGA-36-1581 5 In-Frame Intra-chr p23.2 p23.2 Seq+ 9303 ChimerSeq FusionScan TCGA_RNA-Seq NFAT5-WWP2 NFAT5 chr16 69600277 + WWP2 chr16 69874028 + Exonic hg19 OV TCGA-36-1581 5 In-Frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 9304 ChimerSeq FusionScan TCGA_RNA-Seq GTPBP10-CDK14 GTPBP10 chr7 90003668 + CDK14 chr7 90836479 + Exonic hg19 OV TCGA-36-1581 2 CDS-3'UTR Intra-chr q21.13 q21.13 Seq+ 9305 ChimerSeq FusionScan TCGA_RNA-Seq PLB1-PPP1CB PLB1 chr2 28719036 + PPP1CB chr2 28999716 + Exonic hg19 OV TCGA-36-1581 2 In-Frame Intra-chr p23.2 p23.2 9306 ChimerSeq FusionScan TCGA_RNA-Seq CDKAL1-GMDS CDKAL1 chr6 20548936 + GMDS chr6 1961200 - Exonic hg19 OV TCGA-04-1331 4 Out-of-Frame Intra-chr p22.3 p25.3 9307 ChimerSeq FusionScan TCGA_RNA-Seq MFHAS1-MAST2 MFHAS1 chr8 8747570 - MAST2 chr1 46425057 + Exonic hg19 OV TCGA-04-1331 2 Out-of-Frame Inter-chr p23.1 p34.1 AGC:MAST 9308 ChimerSeq FusionScan TCGA_RNA-Seq PARD3-ZNF521 PARD3 chr10 34805906 - ZNF521 chr18 22672045 - Exonic hg19 OV TCGA-24-1426 14 In-Frame Inter-chr p11.21 q11.2 Oncogene Transcription factor Seq+ 9309 ChimerSeq FusionScan TCGA_RNA-Seq WBSCR16-GTF2IRD1 WBSCR16 chr7 74466817 - GTF2IRD1 chr7 74009340 + Exonic hg19 OV TCGA-24-1426 7 Out-of-Frame Intra-chr q11.23 Transcription factor 9310 ChimerSeq FusionScan TCGA_RNA-Seq TNPO3-DYM TNPO3 chr7 128694704 - DYM chr18 46690157 - Exonic hg19 OV TCGA-24-1426 6 Out-of-Frame Inter-chr q32.1 q21.1 Seq+ 9311 ChimerSeq FusionScan TCGA_RNA-Seq TNPO3-DYM TNPO3 chr7 128694704 - DYM chr18 46645296 - Exonic hg19 OV TCGA-24-1426 3 In-Frame Inter-chr q32.1 q21.1 Seq+ 9312 ChimerSeq FusionScan TCGA_RNA-Seq OSBPL1A-SSBP1 OSBPL1A chr18 21776088 - SSBP1 chr7 141450110 + Exonic hg19 OV TCGA-24-1426 3 Out-of-Frame Inter-chr q11.2 Seq+ 9313 ChimerSeq FusionScan TCGA_RNA-Seq ADK-FAM149B1 ADK chr10 75936644 + FAM149B1 chr10 74987817 + Exonic hg19 OV TCGA-24-1426 2 Out-of-Frame Intra-chr q22.2 q22.2 Seq+ 9314 ChimerSeq FusionScan TCGA_RNA-Seq TMX2-ARHGAP4 TMX2 chr11 57480279 + ARHGAP4 chrX 153179333 - Exonic hg19 OV TCGA-24-1426 2 In-Frame Inter-chr q12.1 q28 9315 ChimerSeq FusionScan TCGA_RNA-Seq CPNE2-FAM192A CPNE2 chr16 57126702 + FAM192A chr16 57197977 - Exonic hg19 OV TCGA-61-1728 13 5'UTR-CDS Intra-chr q13 q13 Seq+ 9316 ChimerSeq FusionScan TCGA_RNA-Seq USP34-FLJ30838 USP34 chr2 61697784 - FLJ30838 chr2 58883784 + Exonic hg19 OV TCGA-61-1728 8 CDS-5'UTR Intra-chr p15 9317 ChimerSeq FusionScan TCGA_RNA-Seq AURKA-SOGA1 AURKA chr20 54956488 - SOGA1 chr20 35445872 - Exonic hg19 OV TCGA-61-1728 8 In-Frame Intra-chr q13.2 Oncogene q11.23 Seq+ 9318 ChimerSeq FusionScan TCGA_RNA-Seq DAB2IP-SLC44A4 DAB2IP chr9 124533003 + SLC44A4 chr6 31837414 - Exonic hg19 OV TCGA-61-1728 7 CDS-5'UTR Inter-chr q33.2 Tumor suppressor gene Seq+ 9319 ChimerSeq FusionScan TCGA_RNA-Seq MED26-SLC1A6 MED26 chr19 16738682 - SLC1A6 chr19 15083730 - Exonic hg19 OV TCGA-61-1728 7 CDS-5'UTR Intra-chr p13.11 p13.12 Seq+ 9320 ChimerSeq FusionScan TCGA_RNA-Seq MED26-SLC1A6 MED26 chr19 16738682 - SLC1A6 chr19 15067521 - Exonic hg19 OV TCGA-61-1728 5 Out-of-Frame Intra-chr p13.11 p13.12 Seq+ 9321 ChimerSeq FusionScan TCGA_RNA-Seq MYO9B-ZNF430 MYO9B chr19 17186684 + ZNF430 chr19 21239436 + Exonic hg19 OV TCGA-61-1728 4 5'UTR-CDS Intra-chr p13.11 Transcription factor Seq+ 9322 ChimerSeq FusionScan TCGA_RNA-Seq MED26-SLC1A6 MED26 chr19 16738682 - SLC1A6 chr19 15075173 - Exonic hg19 OV TCGA-61-1728 2 Out-of-Frame Intra-chr p13.11 p13.12 Seq+ 9323 ChimerSeq FusionScan TCGA_RNA-Seq CASC1-EMP1 CASC1 chr12 25348009 - EMP1 chr12 13364402 + Exonic hg19 OV TCGA-61-1728 2 5'UTR-5'UTR Intra-chr p12.1 Tumor suppressor gene p13.1 Tumor suppressor gene 9324 ChimerSeq FusionScan TCGA_RNA-Seq DARS-R3HDM1 DARS chr2 136668708 - R3HDM1 chr2 136481506 + Exonic hg19 OV TCGA-61-1728 2 In-Frame Intra-chr q21.3 q21.3 Seq+ 9325 ChimerSeq FusionScan TCGA_RNA-Seq GNB2-EEF2 GNB2 chr7 100275038 + EEF2 chr19 3978170 - Exonic hg19 OV TCGA-61-1728 2 In-Frame Inter-chr q22.1 p13.3 9326 ChimerSeq FusionScan TCGA_RNA-Seq UBE2G1-PELP1 UBE2G1 chr17 4269565 - PELP1 chr17 4586247 - Exonic hg19 OV TCGA-29-1710 4 Out-of-Frame Intra-chr p13.2 p13.2 Seq+ 9327 ChimerSeq FusionScan TCGA_RNA-Seq INPP5E-LCN6 INPP5E chr9 139326275 - LCN6 chr9 139642015 - Exonic hg19 OV TCGA-29-1710 2 Out-of-Frame Intra-chr q34.3 q34.3 9328 ChimerSeq FusionScan TCGA_RNA-Seq MLL5-UBE3C MLL5 chr7 104681470 + UBE3C chr7 157013382 + Exonic hg19 OV TCGA-29-1710 2 Out-of-Frame Intra-chr q36.3 9329 ChimerSeq FusionScan TCGA_RNA-Seq ASUN-OS9 ASUN chr12 27090728 - OS9 chr12 58109542 + Exonic hg19 OV TCGA-29-1710 2 5'UTR-CDS Intra-chr q13.3 9330 ChimerSeq FusionScan TCGA_RNA-Seq ADCK3-EPHX1 ADCK3 chr1 227128100 + EPHX1 chr1 226032198 + Exonic hg19 OV TCGA-61-1998 6 5'UTR-CDS Intra-chr Atypical:ABC1 q42.12 Seq+ 9331 ChimerSeq FusionScan TCGA_RNA-Seq CALD1-EXOC4 CALD1 chr7 134552555 + EXOC4 chr7 133502077 + Exonic hg19 OV TCGA-61-1998 3 In-Frame Intra-chr q33 q33 Seq+ 9332 ChimerSeq FusionScan TCGA_RNA-Seq EZH2-ACTR3B EZH2 chr7 148581255 - ACTR3B chr7 152480271 + Exonic hg19 OV TCGA-61-1998 2 5'UTR-CDS Intra-chr q36.1 Oncogene Tumor suppressor gene q36.1 9333 ChimerSeq FusionScan TCGA_RNA-Seq KHDRBS1-KPNA6 KHDRBS1 chr1 32479978 + KPNA6 chr1 32620188 + Exonic hg19 OV TCGA-61-1998 2 In-Frame Intra-chr p35.2 p35.2 9334 ChimerSeq FusionScan TCGA_RNA-Seq EZH2-ACTR3B EZH2 chr7 148581255 - ACTR3B chr7 152498705 + Exonic hg19 OV TCGA-61-1998 2 5'UTR-CDS Intra-chr q36.1 Oncogene Tumor suppressor gene q36.1 9335 ChimerSeq FusionScan TCGA_RNA-Seq PAK4-LSM4 PAK4 chr19 39616559 + LSM4 chr19 18426875 - Exonic hg19 OV TCGA-10-0927 4 5'UTR-CDS Intra-chr q13.2 STE:STE20 p13.11 Seq+ 9336 ChimerSeq FusionScan TCGA_RNA-Seq GNB1-CDK11B GNB1 chr1 1822258 - CDK11B chr1 1577869 - Exonic hg19 OV TCGA-10-0927 2 5'UTR-CDS Intra-chr p36.33 p36.33 Seq+ 9337 ChimerSeq FusionScan TCGA_RNA-Seq ING3-CDH6 ING3 chr7 120595678 + CDH6 chr5 31322924 + Exonic hg19 OV TCGA-10-0927 2 Out-of-Frame Inter-chr q31.31 Tumor suppressor gene p13.3 9338 ChimerSeq FusionScan TCGA_RNA-Seq STAG1-ZNF148 STAG1 chr3 136471036 - ZNF148 chr3 124953173 - Exonic hg19 OV TCGA-61-2110 4 5'UTR-CDS Intra-chr q22.3 q21.2 Transcription factor Seq+ 9339 ChimerSeq FusionScan TCGA_RNA-Seq RPS23-BEX1 RPS23 chr5 81573511 - BEX1 chrX 102318207 - Exonic hg19 OV TCGA-61-2110 2 5'UTR-5'UTR Inter-chr q14.2 q22.1 Tumor suppressor gene 9340 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152480271 + Exonic hg19 OV TCGA-61-2110 2 Out-of-Frame Intra-chr q36.1 Seq+ 9341 ChimerSeq FusionScan TCGA_RNA-Seq GCLM-ARHGAP29 GCLM chr1 94374593 - ARHGAP29 chr1 94674906 - Exonic hg19 OV TCGA-61-2110 2 Out-of-Frame Intra-chr p22.1 p22.1 Tumor suppressor gene 9342 ChimerSeq FusionScan TCGA_RNA-Seq PHRF1-PTDSS2 PHRF1 chr11 609720 + PTDSS2 chr11 479084 + Exonic hg19 OV TCGA-36-1576 3 In-Frame Intra-chr p15.5 Seq+ 9343 ChimerSeq FusionScan TCGA_RNA-Seq CD81-KCNQ1 CD81 chr11 2398845 + KCNQ1 chr11 2683190 + Exonic hg19 OV TCGA-36-1576 3 Out-of-Frame Intra-chr p15.5 p15.5 Seq+ 9344 ChimerSeq FusionScan TCGA_RNA-Seq FAM20A-BTBD6 FAM20A chr17 66596403 - BTBD6 chr14 105715118 + Exonic hg19 OV TCGA-36-1576 2 5'UTR-5'UTR Inter-chr q24.2 q32.33 9345 ChimerSeq FusionScan TCGA_RNA-Seq NRF1-FAM40B NRF1 chr7 129251665 + FAM40B chr7 129091453 + Exonic hg19 OV TCGA-36-1576 2 5'UTR-CDS Intra-chr q32.2 Tumor suppressor gene Transcription factor Seq+ 9346 ChimerSeq FusionScan TCGA_RNA-Seq COL1A1-SCARA3 COL1A1 chr17 48264375 - SCARA3 chr8 27528416 + Exonic hg19 OV TCGA-36-1576 2 Out-of-Frame Inter-chr q21.33 Oncogene p21.1 9347 ChimerSeq FusionScan TCGA_RNA-Seq RHPN2-SLC7A10 RHPN2 chr19 33555689 - SLC7A10 chr19 33706879 - Exonic hg19 OV TCGA-36-1576 2 Out-of-Frame Intra-chr q13.11 q13.11 Seq+ 9348 ChimerSeq FusionScan TCGA_RNA-Seq YWHAE-SLC43A2 YWHAE chr17 1257504 - SLC43A2 chr17 1496573 - Exonic hg19 OV TCGA-29-1774 2 Out-of-Frame Intra-chr p13.3 Seq+ 9349 ChimerSeq FusionScan TCGA_RNA-Seq AFMID-AGXT2L2 AFMID chr17 76198832 + AGXT2L2 chr5 177652430 - Exonic hg19 OV TCGA-29-1774 2 In-Frame Inter-chr q25.3 9350 ChimerSeq FusionScan TCGA_RNA-Seq NUP62-ATF5 NUP62 chr19 50432582 - ATF5 chr19 50435678 + Exonic hg19 OV TCGA-29-1774 2 5'UTR-CDS Intra-chr q13.33 q13.33 Transcription factor Seq+ 9351 ChimerSeq FusionScan TCGA_RNA-Seq DNAJB1-EPS15L1 DNAJB1 chr19 14628950 - EPS15L1 chr19 16472795 - Exonic hg19 OV TCGA-04-1519 2 In-Frame Intra-chr p13.12 Tumor suppressor gene p13.11 Seq+ 9352 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0319L-PSMB2 KIAA0319L chr1 36019950 - PSMB2 chr1 36102033 - Exonic hg19 OV TCGA-61-1910 4 In-Frame Intra-chr p34.3 p34.3 Seq+ 9353 ChimerSeq FusionScan TCGA_RNA-Seq CIITA-FCHSD2 CIITA chr16 10996658 + FCHSD2 chr11 72632995 - Exonic hg19 OV TCGA-61-1910 4 Out-of-Frame Inter-chr p13.13 q13.4 Seq+ 9354 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC7-GHDC DNAJC7 chr17 40169357 - GHDC chr17 40345612 - Exonic hg19 OV TCGA-61-1910 3 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 9355 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC7-GHDC DNAJC7 chr17 40169357 - GHDC chr17 40345868 - Exonic hg19 OV TCGA-61-1910 3 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 9356 ChimerSeq FusionScan TCGA_RNA-Seq NF1-ADAP2 NF1 chr17 29422387 + ADAP2 chr17 29281495 + Exonic hg19 OV TCGA-61-1910 2 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 9357 ChimerSeq FusionScan TCGA_RNA-Seq CADM1-PARD6G CADM1 chr11 115374988 - PARD6G chr18 77960815 - Exonic hg19 OV TCGA-61-1910 2 Out-of-Frame Inter-chr q23.3 Tumor suppressor gene q23 9358 ChimerSeq FusionScan TCGA_RNA-Seq NUCB1-BAX NUCB1 chr19 49403629 + BAX chr19 49459454 + Exonic hg19 OV TCGA-13-0726 2 5'UTR-5'UTR Intra-chr q13.33 q13.33 Tumor suppressor gene 9359 ChimerSeq FusionScan TCGA_RNA-Seq ARF1-CNIH4 ARF1 chr1 228270466 + CNIH4 chr1 224553580 + Exonic hg19 OV TCGA-13-0726 2 5'UTR-CDS Intra-chr q42.13 Tumor suppressor gene q42.11 9360 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D22A-POLDIP3 TBC1D22A chr22 47193517 + POLDIP3 chr22 42983578 - Exonic hg19 OV TCGA-24-1434 6 In-Frame Intra-chr q13.31 q13.2 Seq+ 9361 ChimerSeq FusionScan TCGA_RNA-Seq ILK-LPPR1 ILK chr11 6629441 + LPPR1 chr9 104075079 + Exonic hg19 OV TCGA-24-1434 3 In-Frame Inter-chr p15.4 TKL:MLK Tumor suppressor gene Seq+ 9362 ChimerSeq FusionScan TCGA_RNA-Seq C1D-FAM213A C1D chr2 68290089 - FAM213A chr10 82180221 + Exonic hg19 OV TCGA-24-1434 2 5'UTR-5'UTR Inter-chr p14 q23.1 9363 ChimerSeq FusionScan TCGA_RNA-Seq RNF212-CTBP1 RNF212 chr4 1090552 - CTBP1 chr4 1235307 - Exonic hg19 OV TCGA-24-1434 2 CDS-5'UTR Intra-chr p16.3 p16.3 9364 ChimerSeq FusionScan TCGA_RNA-Seq ATG16L2-TP53BP2 ATG16L2 chr11 72528900 + TP53BP2 chr1 223980224 - Exonic hg19 OV TCGA-24-1434 2 In-Frame Inter-chr q13.4 q41 Tumor suppressor gene 9365 ChimerSeq FusionScan TCGA_RNA-Seq AAK1-ACAD10 AAK1 chr2 69754347 - ACAD10 chr12 112150301 + Exonic hg19 OV TCGA-24-1434 2 In-Frame Inter-chr p13.3 Other:NAK q24.12 9366 ChimerSeq FusionScan TCGA_RNA-Seq EEF1D-PUF60 EEF1D chr8 144679517 - PUF60 chr8 144904083 - Exonic hg19 OV TCGA-25-2392 9 5'UTR-5'UTR Intra-chr Seq+ 9367 ChimerSeq FusionScan TCGA_RNA-Seq KTN1-LGALS3 KTN1 chr14 56047072 + LGALS3 chr14 55604087 + Exonic hg19 OV TCGA-25-2392 6 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 9368 ChimerSeq FusionScan TCGA_RNA-Seq MYO3B-TSHZ2 MYO3B chr2 171092646 + TSHZ2 chr20 52103682 + Exonic hg19 OV TCGA-25-2392 3 CDS-3'UTR Inter-chr q31.1 STE:STE20 q13.2 Transcription factor Seq+ 9369 ChimerSeq FusionScan TCGA_RNA-Seq SPECC1L-BCR SPECC1L chr22 24666951 + BCR chr22 23651610 + Exonic hg19 OV TCGA-25-2392 3 5'UTR-CDS Intra-chr q11.23 q11.23 Atypical:BCR Oncogene Tumor suppressor gene Seq+ 9370 ChimerSeq FusionScan TCGA_RNA-Seq SVIL-KGFLP2 SVIL chr10 29852129 - KGFLP2 chr9 41963942 - Exonic hg19 OV TCGA-25-2392 3 5'UTR-3'UTR Inter-chr p11.23 9371 ChimerSeq FusionScan TCGA_RNA-Seq ARIH1-THSD4 ARIH1 chr15 72810475 + THSD4 chr15 72057358 + Exonic hg19 OV TCGA-25-2392 2 Out-of-Frame Intra-chr q24.1 q23 9372 ChimerSeq FusionScan TCGA_RNA-Seq MAP2K4-NDUFC2 MAP2K4 chr17 12032604 + NDUFC2 chr11 77784187 - Exonic hg19 OV TCGA-25-2392 2 Out-of-Frame Inter-chr p12 STE:STE7 Oncogene Tumor suppressor gene q14.1 9373 ChimerSeq FusionScan TCGA_RNA-Seq NUP35-KCNH7 NUP35 chr2 184016377 + KCNH7 chr2 163292107 - Exonic hg19 OV TCGA-25-2392 2 Out-of-Frame Intra-chr q32.1 q24.2 Seq+ 9374 ChimerSeq FusionScan TCGA_RNA-Seq XRCC5-VWA3B XRCC5 chr2 217026771 + VWA3B chr2 98732114 + Exonic hg19 OV TCGA-25-2392 2 In-Frame Intra-chr q35 Tumor suppressor gene q11.2 9375 ChimerSeq FusionScan TCGA_RNA-Seq NOTCH3-ERF NOTCH3 chr19 15303187 - ERF chr19 42754717 - Exonic hg19 OV TCGA-23-1109 3 In-Frame Intra-chr p13.12 Oncogene Tumor suppressor gene q13.2 Tumor suppressor gene Transcription factor 9376 ChimerSeq FusionScan TCGA_RNA-Seq PPP3R1-C1D PPP3R1 chr2 68444223 - C1D chr2 68274451 - Exonic hg19 OV TCGA-23-1109 2 CDS-5'UTR Intra-chr p14 p14 Seq+ 9377 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD27-ATP5C1 ANKRD27 chr19 33135230 - ATP5C1 chr10 7839009 + Exonic hg19 OV TCGA-23-1109 2 Out-of-Frame Inter-chr q13.11 p14 9378 ChimerSeq FusionScan TCGA_RNA-Seq RNF212-MFSD10 RNF212 chr4 1107143 - MFSD10 chr4 2935671 - Exonic hg19 OV TCGA-23-1109 2 CDS-5'UTR Intra-chr p16.3 p16.3 9379 ChimerSeq FusionScan TCGA_RNA-Seq PLOD2-PTTG1 PLOD2 chr3 145878667 - PTTG1 chr5 159849308 + Exonic hg19 OV TCGA-23-1109 2 CDS-5'UTR Inter-chr q24 q33.3 9380 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D15-ANKLE2 TBC1D15 chr12 72233591 + ANKLE2 chr12 133331719 - Exonic hg19 OV TCGA-23-1109 2 Out-of-Frame Intra-chr q21.1 q24.33 9381 ChimerSeq FusionScan TCGA_RNA-Seq PIGS-SPAG5 PIGS chr17 26887066 - SPAG5 chr17 26913517 - Exonic hg19 OV TCGA-24-1847 7 In-Frame Intra-chr q11.2 q11.2 Seq+ 9382 ChimerSeq FusionScan TCGA_RNA-Seq PHF12-MYO18A PHF12 chr17 27248705 - MYO18A chr17 27401932 - Exonic hg19 OV TCGA-24-1847 6 In-Frame Intra-chr q11.2 q11.2 Oncogene Seq+ 9383 ChimerSeq FusionScan TCGA_RNA-Seq PRKAR1B-GNA12 PRKAR1B chr7 645829 - GNA12 chr7 2773135 - Exonic hg19 OV TCGA-24-1847 3 In-Frame Intra-chr p22.3 p22.2 Seq+ 9384 ChimerSeq FusionScan TCGA_RNA-Seq ACYP2-YBX1 ACYP2 chr2 54365885 + YBX1 chr1 43166451 + Exonic hg19 OV TCGA-24-1847 2 In-Frame Inter-chr p16.2 p34.2 Transcription factor 9385 ChimerSeq FusionScan TCGA_RNA-Seq CREBL2-PAFAH1B1 CREBL2 chr12 12765121 + PAFAH1B1 chr17 2583457 + Exonic hg19 OV TCGA-24-1847 2 In-Frame Inter-chr p13.1 Transcription factor p13.3 Tumor suppressor gene 9386 ChimerSeq FusionScan TCGA_RNA-Seq ALDH3B1-MYL4 ALDH3B1 chr11 67782929 + MYL4 chr17 45286754 + Exonic hg19 OV TCGA-29-1695 3 CDS-5'UTR Inter-chr q13.2 q21.32 Seq+ 9387 ChimerSeq FusionScan TCGA_RNA-Seq SIN3A-CYP11A1 SIN3A chr15 75714987 - CYP11A1 chr15 74640396 - Exonic hg19 OV TCGA-29-1695 3 Out-of-Frame Intra-chr q24.2 q24.1 Seq+ 9388 ChimerSeq FusionScan TCGA_RNA-Seq TATDN1-PVT1 TATDN1 chr8 125551265 - PVT1 chr8 129108763 + Exonic hg19 OV TCGA-29-1695 2 5'UTR-5'UTR Intra-chr q24.13 q24.21 9389 ChimerSeq FusionScan TCGA_RNA-Seq ABI3BP-TFG ABI3BP chr3 100470395 - TFG chr3 100463676 + Exonic hg19 OV TCGA-29-1695 2 In-Frame Intra-chr q12.2 q12.2 9390 ChimerSeq FusionScan TCGA_RNA-Seq CELSR1-FLOT1 CELSR1 chr22 46804892 - FLOT1 chr6 30698877 - Exonic hg19 OV TCGA-29-1695 2 CDS-5'UTR Inter-chr q13.31 9391 ChimerSeq FusionScan TCGA_RNA-Seq IGFBP2-XRCC5 IGFBP2 chr2 217498688 + XRCC5 chr2 217054947 + Exonic hg19 OV TCGA-29-1695 2 In-Frame Intra-chr q35 q35 Tumor suppressor gene 9392 ChimerSeq FusionScan TCGA_RNA-Seq NUP62-ATF5 NUP62 chr19 50432582 - ATF5 chr19 50435678 + Exonic hg19 OV TCGA-29-1695 2 5'UTR-CDS Intra-chr q13.33 q13.33 Transcription factor Seq+ 9393 ChimerSeq FusionScan TCGA_RNA-Seq RFX1-CCDC107 RFX1 chr19 14104336 - CCDC107 chr9 35658572 + Exonic hg19 OV TCGA-13-0801 14 In-Frame Inter-chr p13.12 Transcription factor p13.3 Seq+ 9394 ChimerSeq FusionScan TCGA_RNA-Seq EHD1-ATG2A EHD1 chr11 64645532 - ATG2A chr11 64662681 - Exonic hg19 OV TCGA-13-0801 8 Out-of-Frame Intra-chr q13.1 q13.1 Seq+ 9395 ChimerSeq FusionScan TCGA_RNA-Seq MAP4-LRRC43 MAP4 chr3 48130262 - LRRC43 chr12 122674676 + Exonic hg19 OV TCGA-13-0801 8 5'UTR-CDS Inter-chr p21.31 q24.31 Seq+ 9396 ChimerSeq FusionScan TCGA_RNA-Seq KDM3A-LTBP1 KDM3A chr2 86694006 + LTBP1 chr2 33614250 + Exonic hg19 OV TCGA-13-0801 6 In-Frame Intra-chr p11.2 Tumor suppressor gene p22.3 Seq+ 9397 ChimerSeq FusionScan TCGA_RNA-Seq MAST2-CLDN14 MAST2 chr1 46295253 + CLDN14 chr21 37834074 - Exonic hg19 OV TCGA-13-0801 5 CDS-5'UTR Inter-chr p34.1 AGC:MAST q22.13 Seq+ 9398 ChimerSeq FusionScan TCGA_RNA-Seq DOT1L-OAZ1 DOT1L chr19 2164264 + OAZ1 chr19 2271780 + Exonic hg19 OV TCGA-13-0801 4 In-Frame Intra-chr p13.3 Oncogene Transcription factor p13.3 Seq+ 9399 ChimerSeq FusionScan TCGA_RNA-Seq MECOM-LRRC31 MECOM chr3 169381123 - LRRC31 chr3 169587660 - Exonic hg19 OV TCGA-13-0801 4 5'UTR-5'UTR Intra-chr q26.2 Transcription factor q26.2 Seq+ 9400 ChimerSeq FusionScan TCGA_RNA-Seq ARF1-GUK1 ARF1 chr1 228270466 + GUK1 chr1 228333211 + Exonic hg19 OV TCGA-13-0801 4 5'UTR-5'UTR Intra-chr q42.13 Tumor suppressor gene q42.13 9401 ChimerSeq FusionScan TCGA_RNA-Seq USP39-VAMP8 USP39 chr2 85830204 + VAMP8 chr2 85808698 + Exonic hg19 OV TCGA-13-0801 4 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 9402 ChimerSeq FusionScan TCGA_RNA-Seq CHCHD3-BDH1 CHCHD3 chr7 132709305 - BDH1 chr3 197249652 - Exonic hg19 OV TCGA-13-0801 3 Out-of-Frame Inter-chr q33 Transcription factor Seq+ 9403 ChimerSeq FusionScan TCGA_RNA-Seq USP39-VAMP8 USP39 chr2 85830204 + VAMP8 chr2 85806131 + Exonic hg19 OV TCGA-13-0801 3 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 9404 ChimerSeq FusionScan TCGA_RNA-Seq DOT1L-OAZ1 DOT1L chr19 2164264 + OAZ1 chr19 2271383 + Exonic hg19 OV TCGA-13-0801 2 Out-of-Frame Intra-chr p13.3 Oncogene Transcription factor p13.3 Seq+ 9405 ChimerSeq FusionScan TCGA_RNA-Seq CAP1-WFDC8 CAP1 chr1 40506473 + WFDC8 chr20 44190858 - Exonic hg19 OV TCGA-13-0801 2 5'UTR-CDS Inter-chr p34.2 q13.12 9406 ChimerSeq FusionScan TCGA_RNA-Seq PFKFB3-NOC4L PFKFB3 chr10 6186976 + NOC4L chr12 132635525 + Exonic hg19 OV TCGA-13-0801 2 In-Frame Inter-chr p15.1 q24.33 9407 ChimerSeq FusionScan TCGA_RNA-Seq ZNF3-MCM7 ZNF3 chr7 99677158 - MCM7 chr7 99691024 - Exonic hg19 OV TCGA-13-0801 2 5'UTR-CDS Intra-chr q22.1 Transcription factor q22.1 Seq+ 9408 ChimerSeq FusionScan TCGA_RNA-Seq MAST2-CLDN14 MAST2 chr1 46295253 + CLDN14 chr21 37882798 - Exonic hg19 OV TCGA-13-0801 2 CDS-5'UTR Inter-chr p34.1 AGC:MAST q22.13 Seq+ 9409 ChimerSeq FusionScan TCGA_RNA-Seq SMARCA2-CTDP1 SMARCA2 chr9 2015404 + CTDP1 chr18 77496354 + Exonic hg19 OV TCGA-13-0801 2 5'UTR-CDS Inter-chr p24.3 Tumor suppressor gene 9410 ChimerSeq FusionScan TCGA_RNA-Seq PAQR7-ANXA7 PAQR7 chr1 26197099 - ANXA7 chr10 75148172 - Exonic hg19 OV TCGA-13-0801 2 5'UTR-5'UTR Inter-chr p36.11 q22.2 Tumor suppressor gene 9411 ChimerSeq FusionScan TCGA_RNA-Seq SCYL1-ASNA1 SCYL1 chr11 65299154 + ASNA1 chr19 12856190 + Exonic hg19 OV TCGA-13-0801 2 In-Frame Inter-chr q13.1 Other:SCY1 Tumor suppressor gene p13.13 9412 ChimerSeq FusionScan TCGA_RNA-Seq IQSEC3-GABRE IQSEC3 chr12 250451 + GABRE chrX 151124332 - Exonic hg19 OV TCGA-13-0801 2 Out-of-Frame Inter-chr q28 9413 ChimerSeq FusionScan TCGA_RNA-Seq RPS6-NCAPG RPS6 chr9 19380187 - NCAPG chr4 17838781 + Exonic hg19 OV TCGA-13-0801 2 3'UTR-CDS Inter-chr p22.1 p15.31 9414 ChimerSeq FusionScan TCGA_RNA-Seq CCT4-ACP1 CCT4 chr2 62096574 - ACP1 chr2 271865 + Exonic hg19 OV TCGA-13-1403 10 Out-of-Frame Intra-chr p15 p25.3 9415 ChimerSeq FusionScan TCGA_RNA-Seq MATR3-UBE2D2 MATR3 chr5 138629717 + UBE2D2 chr5 138979956 + Exonic hg19 OV TCGA-13-1403 8 In-Frame Intra-chr q31.2 q31.2 Seq+ 9416 ChimerSeq FusionScan TCGA_RNA-Seq SH3YL1-ACP1 SH3YL1 chr2 263983 - ACP1 chr2 271865 + Exonic hg19 OV TCGA-13-1403 6 In-Frame Intra-chr p25.3 p25.3 Seq+ 9417 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0100-FAM222B KIAA0100 chr17 26958496 - FAM222B chr17 27093725 - Exonic hg19 OV TCGA-13-1403 3 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 9418 ChimerSeq FusionScan TCGA_RNA-Seq DDX10-ATM DDX10 chr11 108722936 + ATM chr11 108235808 + Exonic hg19 OV TCGA-13-1403 3 In-Frame Intra-chr q22.3 q22.3 Atypical:PIKK Oncogene Tumor suppressor gene Seq+ 9419 ChimerSeq FusionScan TCGA_RNA-Seq SBNO2-CCL26 SBNO2 chr19 1154182 - CCL26 chr7 75401572 - Exonic hg19 OV TCGA-13-1403 2 CDS-5'UTR Inter-chr p13.3 q11.23 9420 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R37-IGSF23 PPP1R37 chr19 45596785 + IGSF23 chr19 45130716 + Exonic hg19 OV TCGA-13-1403 2 In-Frame Intra-chr q13.32 q13.31 Seq+ 9421 ChimerSeq FusionScan TCGA_RNA-Seq WASF2-IFI6 WASF2 chr1 27816496 - IFI6 chr1 27995857 - Exonic hg19 OV TCGA-13-1403 2 5'UTR-5'UTR Intra-chr p36.11 p35.3 Seq+ 9422 ChimerSeq FusionScan TCGA_RNA-Seq PCCB-KDM4A PCCB chr3 136019953 + KDM4A chr1 44128564 + Exonic hg19 OV TCGA-13-1403 2 In-Frame Inter-chr q22.3 p34.2 9423 ChimerSeq FusionScan TCGA_RNA-Seq KDM4C-GMPS KDM4C chr9 6893232 + GMPS chr3 155611306 + Exonic hg19 OV TCGA-13-1403 2 In-Frame Inter-chr p24.1 q25.31 9424 ChimerSeq FusionScan TCGA_RNA-Seq NDUFV1-HAGHL NDUFV1 chr11 67378678 + HAGHL chr16 779287 + Exonic hg19 OV TCGA-13-1403 2 Out-of-Frame Inter-chr q13.2 p13.3 9425 ChimerSeq FusionScan TCGA_RNA-Seq SNHG4-UBE2D2 SNHG4 chr5 138614818 + UBE2D2 chr5 138979956 + Exonic hg19 OV TCGA-13-1403 2 5'UTR-5'UTR Intra-chr q31.2 q31.2 9426 ChimerSeq FusionScan TCGA_RNA-Seq TUBGCP6-PLXNB2 TUBGCP6 chr22 50678632 - PLXNB2 chr22 50723094 - Exonic hg19 OV TCGA-13-1403 2 Out-of-Frame Intra-chr q13.33 q13.33 Seq+ 9427 ChimerSeq FusionScan TCGA_RNA-Seq SRCAP-SLX1B SRCAP chr16 30727800 + SLX1B chr16 29469248 + Exonic hg19 OV TCGA-23-1118 3 Out-of-Frame Intra-chr p11.2 Transcription factor p11.2 9428 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R5D-GNMT PPP2R5D chr6 42957426 + GNMT chr6 42929949 + Exonic hg19 OV TCGA-23-1118 2 Out-of-Frame Intra-chr p21.1 p21.1 Tumor suppressor gene 9429 ChimerSeq FusionScan TCGA_RNA-Seq DCUN1D2-UPF3A DCUN1D2 chr13 114144981 - UPF3A chr13 115057108 + Exonic hg19 OV TCGA-23-1118 2 In-Frame Intra-chr q34 q34 9430 ChimerSeq FusionScan TCGA_RNA-Seq DCAF7-MAP3K3 DCAF7 chr17 61628176 + MAP3K3 chr17 61729916 + Exonic hg19 OV TCGA-23-1118 2 Out-of-Frame Intra-chr q23.3 q23.3 STE:STE11 Seq+ 9431 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1109-FSIP2 KIAA1109 chr4 123210347 + FSIP2 chr2 186689160 + Exonic hg19 OV TCGA-23-1028 5 Out-of-Frame Inter-chr q27 q32.1 Seq+ 9432 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1109-FSIP2 KIAA1109 chr4 123210347 + FSIP2 chr2 186692882 + Exonic hg19 OV TCGA-23-1028 5 In-Frame Inter-chr q27 q32.1 Seq+ 9433 ChimerSeq FusionScan TCGA_RNA-Seq STIM1-WT1 STIM1 chr11 4076867 + WT1 chr11 32421590 - Exonic hg19 OV TCGA-23-1028 2 In-Frame Intra-chr p15.4 p13 Oncogene Tumor suppressor gene Transcription factor 9434 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD12-C18orf34 ANKRD12 chr18 9136963 + C18orf34 chr18 30554645 - Exonic hg19 OV TCGA-04-1651 10 5'UTR-CDS Intra-chr p11.22 9435 ChimerSeq FusionScan TCGA_RNA-Seq GOLPH3-ZFR GOLPH3 chr5 32173915 - ZFR chr5 32385755 - Exonic hg19 OV TCGA-04-1651 4 In-Frame Intra-chr p13.3 p13.3 Seq+ 9436 ChimerSeq FusionScan TCGA_RNA-Seq SPECC1L-PILRB SPECC1L chr22 24666951 + PILRB chr7 99952765 + Exonic hg19 OV TCGA-04-1651 2 5'UTR-5'UTR Inter-chr q11.23 q22.1 9437 ChimerSeq FusionScan TCGA_RNA-Seq CBLB-PGK1 CBLB chr3 105452852 - PGK1 chrX 77369512 + Exonic hg19 OV TCGA-04-1651 2 Out-of-Frame Inter-chr q13.11 q21.1 9438 ChimerSeq FusionScan TCGA_RNA-Seq SMARCB1-RPLP0 SMARCB1 chr22 24129449 + RPLP0 chr12 120635265 - Exonic hg19 OV TCGA-04-1651 2 In-Frame Inter-chr q11.23 Oncogene Tumor suppressor gene q24.23 9439 ChimerSeq FusionScan TCGA_RNA-Seq CSDE1-PPM1B CSDE1 chr1 115300545 - PPM1B chr2 44428324 + Exonic hg19 OV TCGA-04-1651 2 5'UTR-5'UTR Inter-chr p13.2 p21 9440 ChimerSeq FusionScan TCGA_RNA-Seq SPON1-PSMB1 SPON1 chr11 14063201 + PSMB1 chr6 170858201 - Exonic hg19 OV TCGA-04-1651 2 In-Frame Inter-chr p15.2 9441 ChimerSeq FusionScan TCGA_RNA-Seq ERAP1-CAST ERAP1 chr5 96143562 - CAST chr5 96093147 + Exonic hg19 OV TCGA-04-1651 2 5'UTR-5'UTR Intra-chr q15 q15 9442 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0430-MYH11 KIAA0430 chr16 15718872 - MYH11 chr16 15797980 - Exonic hg19 OV TCGA-04-1651 2 In-Frame Intra-chr Oncogene 9443 ChimerSeq FusionScan TCGA_RNA-Seq RERE-FAM192A RERE chr1 8877218 - FAM192A chr16 57207781 - Exonic hg19 OV TCGA-04-1651 2 5'UTR-5'UTR Inter-chr p36.23 q13 9444 ChimerSeq FusionScan TCGA_RNA-Seq NTN1-STX8 NTN1 chr17 9086286 + STX8 chr17 9153962 - Exonic hg19 OV TCGA-04-1651 2 In-Frame Intra-chr p13.1 p13.1 Seq+ 9445 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1L1-MUCL1 WHSC1L1 chr8 38239316 - MUCL1 chr12 55250553 + Exonic hg19 OV TCGA-29-1702 3 5'UTR-CDS Inter-chr p11.23 Tumor suppressor gene q13.2 Seq+ 9446 ChimerSeq FusionScan TCGA_RNA-Seq PAFAH1B1-SMYD4 PAFAH1B1 chr17 2497300 + SMYD4 chr17 1731300 - Exonic hg19 OV TCGA-29-1702 2 5'UTR-5'UTR Intra-chr p13.3 Tumor suppressor gene p13.3 Tumor suppressor gene Seq+ 9447 ChimerSeq FusionScan TCGA_RNA-Seq ZDHHC17-ANO4 ZDHHC17 chr12 77158109 + ANO4 chr12 101295423 + Exonic hg19 OV TCGA-29-1702 2 CDS-5'UTR Intra-chr q21.2 q23.1 Seq+ 9448 ChimerSeq FusionScan TCGA_RNA-Seq CHP-SMAD3 CHP chr15 41555081 + SMAD3 chr15 67482750 + Exonic hg19 OV TCGA-29-1702 2 Out-of-Frame Intra-chr q22.33 Transcription factor 9449 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1L1-MUCL1 WHSC1L1 chr8 38239316 - MUCL1 chr12 55248899 + Exonic hg19 OV TCGA-29-1702 2 5'UTR-CDS Inter-chr p11.23 Tumor suppressor gene q13.2 Seq+ 9450 ChimerSeq FusionScan TCGA_RNA-Seq RALGPS2-PPP2R5A RALGPS2 chr1 178876002 + PPP2R5A chr1 212502476 + Exonic hg19 OV TCGA-24-1463 2 Out-of-Frame Intra-chr q25.2 q32.3 9451 ChimerSeq FusionScan TCGA_RNA-Seq SF1-IVNS1ABP SF1 chr11 64543969 - IVNS1ABP chr1 185274775 - Exonic hg19 OV TCGA-24-1463 2 Out-of-Frame Inter-chr q13.1 q25.3 9452 ChimerSeq FusionScan TCGA_RNA-Seq SOGA2-NRD1 SOGA2 chr18 8720494 + NRD1 chr1 52306186 - Exonic hg19 OV TCGA-24-1463 2 Out-of-Frame Inter-chr 9453 ChimerSeq FusionScan TCGA_RNA-Seq ZC3H7B-SLC9A8 ZC3H7B chr22 41742212 + SLC9A8 chr20 48504365 + Exonic hg19 OV TCGA-61-2111 5 In-Frame Inter-chr q13.2 q13.13 Seq+ 9454 ChimerSeq FusionScan TCGA_RNA-Seq CPD-MYL4 CPD chr17 28712254 + MYL4 chr17 45286754 + Exonic hg19 OV TCGA-61-2111 5 CDS-5'UTR Intra-chr q11.2 Tumor suppressor gene q21.32 Seq+ 9455 ChimerSeq FusionScan TCGA_RNA-Seq YWHAE-METTL16 YWHAE chr17 1303340 - METTL16 chr17 2405625 - Exonic hg19 OV TCGA-61-2111 4 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 9456 ChimerSeq FusionScan TCGA_RNA-Seq AMDHD2-COG7 AMDHD2 chr16 2571124 + COG7 chr16 23409450 - Exonic hg19 OV TCGA-61-2111 4 In-Frame Intra-chr p13.3 p12.2 Seq+ 9457 ChimerSeq FusionScan TCGA_RNA-Seq ACTR3-POLR1B ACTR3 chr2 114647900 + POLR1B chr2 113315486 + Exonic hg19 OV TCGA-61-2111 3 Out-of-Frame Intra-chr q14.1 q14.1 Seq+ 9458 ChimerSeq FusionScan TCGA_RNA-Seq ACTR3-POLR1B ACTR3 chr2 114647900 + POLR1B chr2 113316869 + Exonic hg19 OV TCGA-61-2111 3 Out-of-Frame Intra-chr q14.1 q14.1 Seq+ 9459 ChimerSeq FusionScan TCGA_RNA-Seq SNN-LITAF SNN chr16 11762396 + LITAF chr16 11650591 - Exonic hg19 OV TCGA-61-2111 3 5'UTR-5'UTR Intra-chr p13.13 p13.13 Tumor suppressor gene Seq+ 9460 ChimerSeq FusionScan TCGA_RNA-Seq ADSL-PVALB ADSL chr22 40742715 + PVALB chr22 37196962 - Exonic hg19 OV TCGA-61-2111 2 Out-of-Frame Intra-chr q13.1 Seq+ 9461 ChimerSeq FusionScan TCGA_RNA-Seq NUMB-NRG2 NUMB chr14 73876644 - NRG2 chr5 139260559 - Exonic hg19 OV TCGA-61-2111 2 5'UTR-CDS Inter-chr q24.3 Tumor suppressor gene q31.2 9462 ChimerSeq FusionScan TCGA_RNA-Seq C12orf51-SRP19 C12orf51 chr12 112702978 - SRP19 chr5 112227299 + Exonic hg19 OV TCGA-61-2111 2 Out-of-Frame Inter-chr q22.2 9463 ChimerSeq FusionScan TCGA_RNA-Seq FXR1-ST6GAL1 FXR1 chr3 180630524 + ST6GAL1 chr3 186756529 + Exonic hg19 OV TCGA-61-2016 7 5'UTR-5'UTR Intra-chr q26.33 q27.3 Seq+ 9464 ChimerSeq FusionScan TCGA_RNA-Seq MLLT4-TCP10 MLLT4 chr6 168227917 + TCP10 chr6 167791580 - Exonic hg19 OV TCGA-61-2016 3 In-Frame Intra-chr q27 Seq+ 9465 ChimerSeq FusionScan TCGA_RNA-Seq SOS1-CMTM6 SOS1 chr2 39347476 - CMTM6 chr3 32533378 - Exonic hg19 OV TCGA-61-2016 2 In-Frame Inter-chr p22.1 p22.3 9466 ChimerSeq FusionScan TCGA_RNA-Seq TXNIP-HSD17B4 TXNIP chr1 145440788 + HSD17B4 chr5 118877599 + Exonic hg19 OV TCGA-61-2016 2 Out-of-Frame Inter-chr q21.1 Tumor suppressor gene q23.1 9467 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT6 NDUFA11 chr19 5896463 - FUT6 chr19 5832590 - Exonic hg19 OV TCGA-61-2016 2 CDS-5'UTR Intra-chr p13.3 p13.3 9468 ChimerSeq FusionScan TCGA_RNA-Seq PTK2-PHF20L1 PTK2 chr8 141684396 - PHF20L1 chr8 133858025 + Exonic hg19 OV TCGA-61-2016 2 Out-of-Frame Intra-chr q24.3 q24.22 9469 ChimerSeq FusionScan TCGA_RNA-Seq VAV1-EXOC3 VAV1 chr19 6828498 + EXOC3 chr5 465225 + Exonic hg19 OV TCGA-61-2016 2 In-Frame Inter-chr p13.3 p15.33 9470 ChimerSeq FusionScan TCGA_RNA-Seq EHMT1-ATP13A1 EHMT1 chr9 140611634 + ATP13A1 chr19 19770796 - Exonic hg19 OV TCGA-61-1733 5 In-Frame Inter-chr q34.3 p13.11 Seq+ 9471 ChimerSeq FusionScan TCGA_RNA-Seq PELP1-CAMTA2 PELP1 chr17 4577804 - CAMTA2 chr17 4877795 - Exonic hg19 OV TCGA-61-1733 3 In-Frame Intra-chr p13.2 p13.2 Transcription factor Seq+ 9472 ChimerSeq FusionScan TCGA_RNA-Seq SNX5-EIF3C SNX5 chr20 17949017 - EIF3C chr16 28737925 + Exonic hg19 OV TCGA-61-1733 2 Out-of-Frame Inter-chr p11.23 p11.2 9473 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-RSBN1L PTPN12 chr7 77212967 + RSBN1L chr7 77365726 + Exonic hg19 OV TCGA-61-1733 2 Out-of-Frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 9474 ChimerSeq FusionScan TCGA_RNA-Seq ANK3-COBRA1 ANK3 chr10 62374943 - COBRA1 chr9 140157488 + Exonic hg19 OV TCGA-61-1733 2 In-Frame Inter-chr q21.2 9475 ChimerSeq FusionScan TCGA_RNA-Seq SPINT2-TYROBP SPINT2 chr19 38755638 + TYROBP chr19 36399211 - Exonic hg19 OV TCGA-57-1994 5 CDS-5'UTR Intra-chr q13.2 Tumor suppressor gene q13.12 Seq+ 9476 ChimerSeq FusionScan TCGA_RNA-Seq CHD7-CLVS1 CHD7 chr8 61591641 + CLVS1 chr8 62289163 + Exonic hg19 OV TCGA-57-1994 3 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 9477 ChimerSeq FusionScan TCGA_RNA-Seq DVL3-ECE2 DVL3 chr3 183885853 + ECE2 chr3 184009849 + Exonic hg19 OV TCGA-57-1994 3 Out-of-Frame Intra-chr q27.1 q27.1 Seq+ 9478 ChimerSeq FusionScan TCGA_RNA-Seq SUGT1-CNOT10 SUGT1 chr13 53238192 + CNOT10 chr3 32800949 + Exonic hg19 OV TCGA-57-1994 2 In-Frame Inter-chr q14.3 p22.3 9479 ChimerSeq FusionScan TCGA_RNA-Seq MBNL1-COMMD2 MBNL1 chr3 152018156 + COMMD2 chr3 149459505 - Exonic hg19 OV TCGA-57-1994 2 In-Frame Intra-chr q25.1 q25.1 9480 ChimerSeq FusionScan TCGA_RNA-Seq NOTCH3-HOXD11 NOTCH3 chr19 15308310 - HOXD11 chr2 176973634 + Exonic hg19 OV TCGA-57-1994 2 Out-of-Frame Inter-chr p13.12 Oncogene Tumor suppressor gene q31.1 Transcription factor Seq+ 9481 ChimerSeq FusionScan TCGA_RNA-Seq SDHAF2-API5 SDHAF2 chr11 61197654 + API5 chr11 43340189 + Exonic hg19 OV TCGA-57-1994 2 In-Frame Intra-chr q12.2 p12 9482 ChimerSeq FusionScan TCGA_RNA-Seq CEP192-PSMG2 CEP192 chr18 13092526 + PSMG2 chr18 12718515 + Exonic hg19 OV TCGA-57-1994 2 Out-of-Frame Intra-chr p11.21 p11.21 9483 ChimerSeq FusionScan TCGA_RNA-Seq MAP2K1-CCNB2 MAP2K1 chr15 66737045 + CCNB2 chr15 59415715 + Exonic hg19 OV TCGA-57-1994 2 Out-of-Frame Intra-chr q22.31 STE:STE7 Oncogene q22.2 9484 ChimerSeq FusionScan TCGA_RNA-Seq SYCP2-CTCFL SYCP2 chr20 58442765 - CTCFL chr20 56090890 - Exonic hg19 OV TCGA-57-1994 2 In-Frame Intra-chr q13.33 q13.31 Tumor suppressor gene Transcription factor 9485 ChimerSeq FusionScan TCGA_RNA-Seq FLI1-NSMCE2 FLI1 chr11 128564171 + NSMCE2 chr8 126163412 + Exonic hg19 OV TCGA-57-1994 2 Out-of-Frame Inter-chr q24.3 Oncogene Transcription factor q24.13 9486 ChimerSeq FusionScan TCGA_RNA-Seq PGK1-ATP7A PGK1 chrX 77365414 + ATP7A chrX 77294333 + Exonic hg19 OV TCGA-24-1548 10 Out-of-Frame Intra-chr q21.1 q21.1 Seq+ 9487 ChimerSeq FusionScan TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61665879 - ANK3 chr10 61827767 - Exonic hg19 OV TCGA-24-1548 4 Out-of-Frame Intra-chr q21.2 q21.2 Seq+ 9488 ChimerSeq FusionScan TCGA_RNA-Seq RUNX3-LDLRAP1 RUNX3 chr1 25245730 - LDLRAP1 chr1 25880412 + Exonic hg19 OV TCGA-24-1548 2 In-Frame Intra-chr p36.11 Tumor suppressor gene Transcription factor p36.11 9489 ChimerSeq FusionScan TCGA_RNA-Seq SENP2-ZNF532 SENP2 chr3 185318643 + ZNF532 chr18 56606676 + Exonic hg19 OV TCGA-24-1548 2 In-Frame Inter-chr q27.2 q21.32 Transcription factor 9490 ChimerSeq FusionScan TCGA_RNA-Seq HDAC3-DIAPH1 HDAC3 chr5 141004774 - DIAPH1 chr5 140967817 - Exonic hg19 OV TCGA-24-1548 2 Out-of-Frame Intra-chr q31.3 Tumor suppressor gene q31.3 9491 ChimerSeq FusionScan TCGA_RNA-Seq NOP56-TTF2 NOP56 chr20 2634039 + TTF2 chr1 117631422 + Exonic hg19 OV TCGA-24-1548 2 Out-of-Frame Inter-chr p13 p13.1 9492 ChimerSeq FusionScan TCGA_RNA-Seq DPY30-LCLAT1 DPY30 chr2 32264347 - LCLAT1 chr2 30785011 + Exonic hg19 OV TCGA-24-1548 2 Out-of-Frame Intra-chr p22.3 p23.1 9493 ChimerSeq FusionScan TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61665879 - ANK3 chr10 61802517 - Exonic hg19 OV TCGA-61-1914 10 In-Frame Intra-chr q21.2 q21.2 Seq+ 9494 ChimerSeq FusionScan TCGA_RNA-Seq MAP2K4-MYH3 MAP2K4 chr17 11924318 + MYH3 chr17 10539170 - Exonic hg19 OV TCGA-61-1914 4 In-Frame Intra-chr p12 STE:STE7 Oncogene Tumor suppressor gene p13.1 Seq+ 9495 ChimerSeq FusionScan TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61665879 - ANK3 chr10 61815794 - Exonic hg19 OV TCGA-61-1914 4 Out-of-Frame Intra-chr q21.2 q21.2 Seq+ 9496 ChimerSeq FusionScan TCGA_RNA-Seq C1orf159-UBE2J2 C1orf159 chr1 1051439 - UBE2J2 chr1 1198766 - Exonic hg19 OV TCGA-61-1914 2 5'UTR-5'UTR Intra-chr p36.33 p36.33 9497 ChimerSeq FusionScan TCGA_RNA-Seq SLC25A53-C11orf10 SLC25A53 chrX 103401558 - C11orf10 chr11 61558074 - Exonic hg19 OV TCGA-61-1914 2 5'UTR-CDS Inter-chr q22.2 9498 ChimerSeq FusionScan TCGA_RNA-Seq XPR1-LRRC48 XPR1 chr1 180601406 + LRRC48 chr17 17919377 + Exonic hg19 OV TCGA-24-2297 31 In-Frame Inter-chr q25.3 Seq+ 9499 ChimerSeq FusionScan TCGA_RNA-Seq SORL1-TBCEL SORL1 chr11 121393698 + TBCEL chr11 120957486 + Exonic hg19 OV TCGA-24-2297 8 Out-of-Frame Intra-chr q24.1 q23.3 Seq+ 9500 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R9A-FBXO16 PPP1R9A chr7 94540820 + FBXO16 chr8 28309993 - Exonic hg19 OV TCGA-24-2297 7 In-Frame Inter-chr q21.3 p21.1 Seq+ 9501 ChimerSeq FusionScan TCGA_RNA-Seq SKAP1-HOXB3 SKAP1 chr17 46423266 - HOXB3 chr17 46632980 - Exonic hg19 OV TCGA-24-2297 6 CDS-5'UTR Intra-chr q21.32 q21.32 Transcription factor Seq+ 9502 ChimerSeq FusionScan TCGA_RNA-Seq GORASP2-MYO3B GORASP2 chr2 171785913 + MYO3B chr2 171508137 + Exonic hg19 OV TCGA-24-2297 6 Out-of-Frame Intra-chr q31.1 q31.1 STE:STE20 Seq+ 9503 ChimerSeq FusionScan TCGA_RNA-Seq TSPAN14-ADARB2 TSPAN14 chr10 82249070 + ADARB2 chr10 1421355 - Exonic hg19 OV TCGA-24-2297 4 Out-of-Frame Intra-chr q23.1 p15.3 Seq+ 9504 ChimerSeq FusionScan TCGA_RNA-Seq NUMA1-PDE2A NUMA1 chr11 71780887 - PDE2A chr11 72353370 - Exonic hg19 OV TCGA-24-2297 4 5'UTR-CDS Intra-chr q13.4 Oncogene q13.4 Seq+ 9505 ChimerSeq FusionScan TCGA_RNA-Seq ERBB4-RBM33 ERBB4 chr2 213403172 - RBM33 chr7 155567252 + Exonic hg19 OV TCGA-24-2297 4 Out-of-Frame Inter-chr q34 Oncogene Tumor suppressor gene q36.3 Seq+ 9506 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1967-PPP3CC KIAA1967 chr8 22470649 + PPP3CC chr8 22368598 + Exonic hg19 OV TCGA-24-2297 4 Out-of-Frame Intra-chr Tumor suppressor gene p21.3 Tumor suppressor gene 9507 ChimerSeq FusionScan TCGA_RNA-Seq PTPN14-MARK3 PTPN14 chr1 214637972 - MARK3 chr14 103928741 + Exonic hg19 OV TCGA-24-2297 2 In-Frame Inter-chr q41 q32.32 CAMK:CAMKL 9508 ChimerSeq FusionScan TCGA_RNA-Seq SPRED3-RFXANK SPRED3 chr19 38885116 + RFXANK chr19 19304747 + Exonic hg19 OV TCGA-24-2297 2 3'UTR-5'UTR Intra-chr q13.2 p13.11 9509 ChimerSeq FusionScan TCGA_RNA-Seq NUP153-CDKAL1 NUP153 chr6 17616757 - CDKAL1 chr6 21198251 + Exonic hg19 OV TCGA-24-2297 2 Out-of-Frame Intra-chr p22.3 p22.3 9510 ChimerSeq FusionScan TCGA_RNA-Seq GAK-OPTN GAK chr4 891820 - OPTN chr10 13175501 + Exonic hg19 OV TCGA-24-2297 2 Out-of-Frame Inter-chr p16.3 Other:NAK p13 9511 ChimerSeq FusionScan TCGA_RNA-Seq OPTN-ADH5 OPTN chr10 13150289 + ADH5 chr4 99996200 - Exonic hg19 OV TCGA-24-2297 2 5'UTR-CDS Inter-chr p13 q23 9512 ChimerSeq FusionScan TCGA_RNA-Seq AKAP1-SCPEP1 AKAP1 chr17 55162759 + SCPEP1 chr17 55083533 + Exonic hg19 OV TCGA-24-2297 2 5'UTR-CDS Intra-chr q22 q22 9513 ChimerSeq FusionScan TCGA_RNA-Seq PGM2L1-C1orf61 PGM2L1 chr11 74079536 - C1orf61 chr1 156384545 - Exonic hg19 OV TCGA-23-1107 8 Out-of-Frame Inter-chr q13.4 q22 Seq+ 9514 ChimerSeq FusionScan TCGA_RNA-Seq FAM129B-C9orf50 FAM129B chr9 130331098 - C9orf50 chr9 132375876 - Exonic hg19 OV TCGA-23-1107 4 In-Frame Intra-chr q34.11 q34.11 Seq+ 9515 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC17-SERINC2 ZCCHC17 chr1 31821821 + SERINC2 chr1 31883231 + Exonic hg19 OV TCGA-23-1107 3 In-Frame Intra-chr p35.2 p35.2 9516 ChimerSeq FusionScan TCGA_RNA-Seq PGM2L1-C1orf61 PGM2L1 chr11 74079536 - C1orf61 chr1 156374393 - Exonic hg19 OV TCGA-23-1107 3 In-Frame Inter-chr q13.4 q22 Seq+ 9517 ChimerSeq FusionScan TCGA_RNA-Seq TANC1-PKP4 TANC1 chr2 159825294 + PKP4 chr2 159530188 + Exonic hg19 OV TCGA-04-1365 15 5'UTR-CDS Intra-chr q24.2 q24.1 Seq+ 9518 ChimerSeq FusionScan TCGA_RNA-Seq ZMYND8-EYA2 ZMYND8 chr20 45874751 - EYA2 chr20 45717877 + Exonic hg19 OV TCGA-04-1365 10 In-Frame Intra-chr q13.12 q13.12 Seq+ 9519 ChimerSeq FusionScan TCGA_RNA-Seq RNF217-NKAIN2 RNF217 chr6 125366590 + NKAIN2 chr6 125112484 + Exonic hg19 OV TCGA-04-1365 3 In-Frame Intra-chr q22.31 q22.31 Seq+ 9520 ChimerSeq FusionScan TCGA_RNA-Seq SPRED3-RFXANK SPRED3 chr19 38885116 + RFXANK chr19 19304747 + Exonic hg19 OV TCGA-04-1365 2 3'UTR-5'UTR Intra-chr q13.2 p13.11 9521 ChimerSeq FusionScan TCGA_RNA-Seq BET1-SMARCB1 BET1 chr7 93633509 - SMARCB1 chr22 24175758 + Exonic hg19 OV TCGA-04-1365 2 Out-of-Frame Inter-chr q21.3 q11.23 Oncogene Tumor suppressor gene 9522 ChimerSeq FusionScan TCGA_RNA-Seq RB1-FNDC3A RB1 chr13 48942740 + FNDC3A chr13 49742748 + Exonic hg19 OV TCGA-04-1365 2 In-Frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 9523 ChimerSeq FusionScan TCGA_RNA-Seq SRGAP3-C3orf24 SRGAP3 chr3 9146363 - C3orf24 chr3 10146466 - Exonic hg19 OV TCGA-04-1365 2 CDS-5'UTR Intra-chr p25.3 Tumor suppressor gene 9524 ChimerSeq FusionScan TCGA_RNA-Seq SHFM1-BAIAP2L1 SHFM1 chr7 96338999 - BAIAP2L1 chr7 97949610 - Exonic hg19 OV TCGA-04-1365 2 In-Frame Intra-chr q22.1 9525 ChimerSeq FusionScan TCGA_RNA-Seq SKA2-MAPK1 SKA2 chr17 57232491 - MAPK1 chr22 22162135 - Exonic hg19 OV TCGA-04-1365 2 Out-of-Frame Inter-chr q22 q11.22 Oncogene 9526 ChimerSeq FusionScan TCGA_RNA-Seq GFOD1-TRAPPC9 GFOD1 chr6 13486869 - TRAPPC9 chr8 140744445 - Exonic hg19 OV TCGA-04-1365 2 In-Frame Inter-chr p23 q24.3 9527 ChimerSeq FusionScan TCGA_RNA-Seq RPL6-NAE1 RPL6 chr12 112844097 - NAE1 chr16 66850575 - Exonic hg19 OV TCGA-04-1365 2 In-Frame Inter-chr q24.13 q22.1 9528 ChimerSeq FusionScan TCGA_RNA-Seq PRDX3-TIMM23 PRDX3 chr10 120931893 - TIMM23 chr10 51592619 - Exonic hg19 OV TCGA-04-1365 2 Out-of-Frame Intra-chr q26.11 q11.22 9529 ChimerSeq FusionScan TCGA_RNA-Seq ACO2-ZC3H7B ACO2 chr22 41865186 + ZC3H7B chr22 41721567 + Exonic hg19 OV TCGA-10-0936 4 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 9530 ChimerSeq FusionScan TCGA_RNA-Seq ELOF1-CHERP ELOF1 chr19 11670005 - CHERP chr19 16646447 - Exonic hg19 OV TCGA-10-0936 3 5'UTR-CDS Intra-chr p13.2 p13.11 9531 ChimerSeq FusionScan TCGA_RNA-Seq UBE2D2-LPHN1 UBE2D2 chr5 138941400 + LPHN1 chr19 14294509 - Exonic hg19 OV TCGA-10-0936 2 5'UTR-5'UTR Inter-chr q31.2 9532 ChimerSeq FusionScan TCGA_RNA-Seq NCOA2-EIF3H NCOA2 chr8 71126137 - EIF3H chr8 117671219 - Exonic hg19 OV TCGA-10-0936 2 In-Frame Intra-chr q13.3 Oncogene Transcription factor q24.11 9533 ChimerSeq FusionScan TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61612310 - ANK3 chr10 61848116 - Exonic hg19 OV TCGA-10-0936 2 Out-of-Frame Intra-chr q21.2 q21.2 Seq+ 9534 ChimerSeq FusionScan TCGA_RNA-Seq NARS2-GAB4 NARS2 chr11 78152136 - GAB4 chr22 17473066 - Exonic hg19 OV TCGA-10-0936 2 Out-of-Frame Inter-chr q14.1 q11.1 9535 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT6 NDUFA11 chr19 5896463 - FUT6 chr19 5832590 - Exonic hg19 OV TCGA-10-0936 2 CDS-5'UTR Intra-chr p13.3 p13.3 9536 ChimerSeq FusionScan TCGA_RNA-Seq DIS3L2-LRRFIP1 DIS3L2 chr2 232894790 + LRRFIP1 chr2 238617186 + Exonic hg19 OV TCGA-10-0936 2 In-Frame Intra-chr q37.1 q37.3 9537 ChimerSeq FusionScan TCGA_RNA-Seq RAB7A-CHCHD6 RAB7A chr3 128445202 + CHCHD6 chr3 126571489 + Exonic hg19 OV TCGA-31-1953 10 5'UTR-CDS Intra-chr q21.3 Tumor suppressor gene q21.3 Seq+ 9538 ChimerSeq FusionScan TCGA_RNA-Seq LTBR-ITFG2 LTBR chr12 6494545 + ITFG2 chr12 2926388 + Exonic hg19 OV TCGA-31-1953 5 Out-of-Frame Intra-chr p13.31 p13.33 Seq+ 9539 ChimerSeq FusionScan TCGA_RNA-Seq ASXL1-HCK ASXL1 chr20 30946635 + HCK chr20 30659464 + Exonic hg19 OV TCGA-31-1953 5 Out-of-Frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 TK:Src Seq+ 9540 ChimerSeq FusionScan TCGA_RNA-Seq DVL1-ITPA DVL1 chr1 1273356 - ITPA chr20 3202486 + Exonic hg19 OV TCGA-31-1953 4 Out-of-Frame Inter-chr p36.33 p13 Seq+ 9541 ChimerSeq FusionScan TCGA_RNA-Seq OXSR1-CTDSPL OXSR1 chr3 38265404 + CTDSPL chr3 38009316 + Exonic hg19 OV TCGA-31-1953 3 In-Frame Intra-chr p22.2 p22.2 Tumor suppressor gene Seq+ 9542 ChimerSeq FusionScan TCGA_RNA-Seq ST5-TMEM9B ST5 chr11 8772167 - TMEM9B chr11 8977845 - Exonic hg19 OV TCGA-31-1953 3 In-Frame Intra-chr p15.4 Tumor suppressor gene p15.4 Seq+ 9543 ChimerSeq FusionScan TCGA_RNA-Seq ASXL1-HCK ASXL1 chr20 30946635 + HCK chr20 30642018 + Exonic hg19 OV TCGA-31-1953 2 CDS-5'UTR Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 TK:Src Seq+ 9544 ChimerSeq FusionScan TCGA_RNA-Seq VHL-CPNE9 VHL chr3 10183871 + CPNE9 chr3 9767632 + Exonic hg19 OV TCGA-31-1953 2 Out-of-Frame Intra-chr p25.3 Oncogene Tumor suppressor gene p25.3 Seq+ 9545 ChimerSeq FusionScan TCGA_RNA-Seq WDFY3-CCT3 WDFY3 chr4 85781564 - CCT3 chr1 156294880 - Exonic hg19 OV TCGA-31-1953 2 Out-of-Frame Inter-chr q21.23 q22 9546 ChimerSeq FusionScan TCGA_RNA-Seq VHL-CPNE9 VHL chr3 10183871 + CPNE9 chr3 9771190 + Exonic hg19 OV TCGA-31-1953 2 Out-of-Frame Intra-chr p25.3 Oncogene Tumor suppressor gene p25.3 Seq+ 9547 ChimerSeq FusionScan TCGA_RNA-Seq STAMBP-SPR STAMBP chr2 74058186 + SPR chr2 73115442 + Exonic hg19 OV TCGA-31-1953 2 Out-of-Frame Intra-chr p13.1 p13.2 Seq+ 9548 ChimerSeq FusionScan TCGA_RNA-Seq BABAM1-USHBP1 BABAM1 chr19 17379900 + USHBP1 chr19 17375156 - Exonic hg19 OV TCGA-24-1549 5 CDS-5'UTR Intra-chr p13.11 p13.11 9549 ChimerSeq FusionScan TCGA_RNA-Seq NF1-RAB11FIP4 NF1 chr17 29422387 + RAB11FIP4 chr17 29758830 + Exonic hg19 OV TCGA-24-1549 4 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 9550 ChimerSeq FusionScan TCGA_RNA-Seq CMTM7-METTL2B CMTM7 chr3 32433557 + METTL2B chr7 128119211 + Exonic hg19 OV TCGA-24-1549 4 Out-of-Frame Inter-chr p22.3 q32.1 Seq+ 9551 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1958-SETD4 KIAA1958 chr9 115249398 + SETD4 chr21 37431222 - Exonic hg19 OV TCGA-24-1549 2 5'UTR-5'UTR Inter-chr q32 q22.12 Seq+ 9552 ChimerSeq FusionScan TCGA_RNA-Seq FAM126B-SPATS2L FAM126B chr2 201936332 - SPATS2L chr2 201194153 + Exonic hg19 OV TCGA-24-1549 2 5'UTR-5'UTR Intra-chr q33.1 q33.1 9553 ChimerSeq FusionScan TCGA_RNA-Seq SKAP1-SP2 SKAP1 chr17 46423266 - SP2 chr17 45992677 + Exonic hg19 OV TCGA-24-1549 2 In-Frame Intra-chr q21.32 q21.32 Transcription factor Seq+ 9554 ChimerSeq FusionScan TCGA_RNA-Seq MAGI3-DENND5A MAGI3 chr1 113933971 + DENND5A chr11 9161401 - Exonic hg19 OV TCGA-24-1549 2 In-Frame Inter-chr p13.2 p15.4 Seq+ 9555 ChimerSeq FusionScan TCGA_RNA-Seq PPP4R4-UNC79 PPP4R4 chr14 94642464 + UNC79 chr14 94170970 + Exonic hg19 OV TCGA-24-2293 5 Out-of-Frame Intra-chr q32.12 Seq+ 9556 ChimerSeq FusionScan TCGA_RNA-Seq TNS3-PKD1L1 TNS3 chr7 47463698 - PKD1L1 chr7 47874841 - Exonic hg19 OV TCGA-24-2293 5 Out-of-Frame Intra-chr p12.3 p12.3 Seq+ 9557 ChimerSeq FusionScan TCGA_RNA-Seq SMARCC1-SPINK8 SMARCC1 chr3 47721926 - SPINK8 chr3 48351436 - Exonic hg19 OV TCGA-24-2293 5 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 9558 ChimerSeq FusionScan TCGA_RNA-Seq SLC25A25-CIZ1 SLC25A25 chr9 130830859 + CIZ1 chr9 130932386 - Exonic hg19 OV TCGA-24-2293 3 Out-of-Frame Intra-chr q34.11 q34.11 Tumor suppressor gene Seq+ 9559 ChimerSeq FusionScan TCGA_RNA-Seq PPP4R4-UNC79 PPP4R4 chr14 94642464 + UNC79 chr14 94155010 + Exonic hg19 OV TCGA-24-2293 3 Out-of-Frame Intra-chr q32.12 Seq+ 9560 ChimerSeq FusionScan TCGA_RNA-Seq CPD-NSRP1 CPD chr17 28776766 + NSRP1 chr17 28499559 + Exonic hg19 OV TCGA-24-2293 2 In-Frame Intra-chr q11.2 Tumor suppressor gene q11.2 9561 ChimerSeq FusionScan TCGA_RNA-Seq REEP3-CAMK1D REEP3 chr10 65281337 + CAMK1D chr10 12833156 + Exonic hg19 OV TCGA-24-2293 2 Out-of-Frame Intra-chr q21.3 p13 9562 ChimerSeq FusionScan TCGA_RNA-Seq BMPR1B-WDR66 BMPR1B chr4 95679219 + WDR66 chr12 122404860 + Exonic hg19 OV TCGA-24-2293 2 5'UTR-CDS Inter-chr q22.3 TKL:STKR q24.31 9563 ChimerSeq FusionScan TCGA_RNA-Seq FBXL13-FAM192A FBXL13 chr7 102696090 - FAM192A chr16 57207781 - Exonic hg19 OV TCGA-10-0931 2 5'UTR-5'UTR Inter-chr q22.1 Tumor suppressor gene q13 9564 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0528-LCMT1 KIAA0528 chr12 22696994 - LCMT1 chr16 25175918 + Exonic hg19 OV TCGA-10-0931 2 Out-of-Frame Inter-chr p12.1 9565 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R13B-KLC1 PPP1R13B chr14 104313635 - KLC1 chr14 104166991 + Exonic hg19 OV TCGA-10-0931 2 In-Frame Intra-chr q32.33 q32.33 9566 ChimerSeq FusionScan TCGA_RNA-Seq CASC1-C1orf53 CASC1 chr12 25348009 - C1orf53 chr1 197874925 + Exonic hg19 OV TCGA-10-0931 2 In-Frame Inter-chr p12.1 Tumor suppressor gene q31.3 9567 ChimerSeq FusionScan TCGA_RNA-Seq UHRF2-LSM3 UHRF2 chr9 6421142 + LSM3 chr3 14239535 + Exonic hg19 OV TCGA-10-0931 2 In-Frame Inter-chr p24.1 Tumor suppressor gene p25.1 9568 ChimerSeq FusionScan TCGA_RNA-Seq ABHD14B-TTC9C ABHD14B chr3 52007980 - TTC9C chr11 62502853 + Exonic hg19 OV TCGA-10-0931 2 In-Frame Inter-chr p21.2 q12.3 9569 ChimerSeq FusionScan TCGA_RNA-Seq C20orf132-NOA1 C20orf132 chr20 35796523 - NOA1 chr4 57830692 - Exonic hg19 OV TCGA-10-0931 2 Out-of-Frame Inter-chr q12 9570 ChimerSeq FusionScan TCGA_RNA-Seq SCAF1-MED25 SCAF1 chr19 50145499 + MED25 chr19 50338242 + Exonic hg19 OV TCGA-24-1464 11 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 9571 ChimerSeq FusionScan TCGA_RNA-Seq WDHD1-LGALS3 WDHD1 chr14 55493428 - LGALS3 chr14 55606992 + Exonic hg19 OV TCGA-24-1464 5 Out-of-Frame Intra-chr q22.3 q22.3 Seq+ 9572 ChimerSeq FusionScan TCGA_RNA-Seq RPS23-ATP5B RPS23 chr5 81572216 - ATP5B chr12 57036615 - Exonic hg19 OV TCGA-24-1464 2 5'UTR-CDS Inter-chr q14.2 q13.3 9573 ChimerSeq FusionScan TCGA_RNA-Seq DMWD-VASP DMWD chr19 46294162 - VASP chr19 46029203 + Exonic hg19 OV TCGA-24-1464 2 In-Frame Intra-chr q13.32 q13.32 9574 ChimerSeq FusionScan TCGA_RNA-Seq GTF2E2-RBPMS GTF2E2 chr8 30510949 - RBPMS chr8 30361802 + Exonic hg19 OV TCGA-24-1464 2 Out-of-Frame Intra-chr p12 p12 Seq+ 9575 ChimerSeq FusionScan TCGA_RNA-Seq EEF1G-BSCL2 EEF1G chr11 62338436 - BSCL2 chr11 62462183 - Exonic hg19 OV TCGA-24-0979 7 In-Frame Intra-chr q12.3 q12.3 Seq+ 9576 ChimerSeq FusionScan TCGA_RNA-Seq MIPOL1-DHRS4 MIPOL1 chr14 37717112 + DHRS4 chr14 24429110 + Exonic hg19 OV TCGA-24-0979 3 Out-of-Frame Intra-chr q13.3 q11.2 9577 ChimerSeq FusionScan TCGA_RNA-Seq BTBD2-SBNO2 BTBD2 chr19 1997342 - SBNO2 chr19 1111613 - Exonic hg19 OV TCGA-24-0979 2 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 9578 ChimerSeq FusionScan TCGA_RNA-Seq MYBBP1A-POU5F1 MYBBP1A chr17 4458155 - POU5F1 chr6 31133824 - Exonic hg19 OV TCGA-24-0979 2 CDS-5'UTR Inter-chr p13.2 Tumor suppressor gene Oncogene Transcription factor 9579 ChimerSeq FusionScan TCGA_RNA-Seq NF1-TPMT NF1 chr17 29422387 + TPMT chr6 18149402 - Exonic hg19 OV TCGA-13-0714 2 CDS-5'UTR Inter-chr q11.2 Oncogene Tumor suppressor gene p22.3 Seq+ 9580 ChimerSeq FusionScan TCGA_RNA-Seq FAM222B-NEK8 FAM222B chr17 27093603 - NEK8 chr17 27061000 + Exonic hg19 OV TCGA-24-1431 26 Out-of-Frame Intra-chr q11.2 q11.2 Other:NEK Seq+ 9581 ChimerSeq FusionScan TCGA_RNA-Seq SCYL1-FRMD8 SCYL1 chr11 65300276 + FRMD8 chr11 65172334 + Exonic hg19 OV TCGA-24-1431 9 In-Frame Intra-chr q13.1 Other:SCY1 Tumor suppressor gene q13.1 Seq+ 9582 ChimerSeq FusionScan TCGA_RNA-Seq TAX1BP3-PMP22 TAX1BP3 chr17 3567972 - PMP22 chr17 15134397 - Exonic hg19 OV TCGA-24-1431 7 Out-of-Frame Intra-chr p13.2 p12 Seq+ 9583 ChimerSeq FusionScan TCGA_RNA-Seq SORL1-SC5DL SORL1 chr11 121393698 + SC5DL chr11 121177765 + Exonic hg19 OV TCGA-24-1431 6 In-Frame Intra-chr q24.1 Seq+ 9584 ChimerSeq FusionScan TCGA_RNA-Seq PPP1CB-PLB1 PPP1CB chr2 28999848 + PLB1 chr2 28796063 + Exonic hg19 OV TCGA-24-1431 5 In-Frame Intra-chr p23.2 p23.2 Seq+ 9585 ChimerSeq FusionScan TCGA_RNA-Seq SKAP1-RBM6 SKAP1 chr17 46423266 - RBM6 chr3 50085677 + Exonic hg19 OV TCGA-24-1431 4 Out-of-Frame Inter-chr q21.32 p21.31 Tumor suppressor gene Seq+ 9586 ChimerSeq FusionScan TCGA_RNA-Seq NFIC-CELF5 NFIC chr19 3382241 + CELF5 chr19 3273869 + Exonic hg19 OV TCGA-24-1431 4 Out-of-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 9587 ChimerSeq FusionScan TCGA_RNA-Seq SBNO2-PIAS4 SBNO2 chr19 1174170 - PIAS4 chr19 4012920 + Exonic hg19 OV TCGA-24-1431 4 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 9588 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF17-P2RY6 ARHGEF17 chr11 73022875 + P2RY6 chr11 73006774 + Exonic hg19 OV TCGA-24-1431 3 CDS-5'UTR Intra-chr q13.4 q13.4 9589 ChimerSeq FusionScan TCGA_RNA-Seq SIGIRR-DEAF1 SIGIRR chr11 407061 - DEAF1 chr11 644654 - Exonic hg19 OV TCGA-24-1431 3 Out-of-Frame Intra-chr p15.5 Transcription factor Seq+ 9590 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0284-ADSSL1 KIAA0284 chr14 105360186 + ADSSL1 chr14 105212572 + Exonic hg19 OV TCGA-24-1431 3 Out-of-Frame Intra-chr q32.33 9591 ChimerSeq FusionScan TCGA_RNA-Seq DNASE2-MAST1 DNASE2 chr19 12991615 - MAST1 chr19 12984422 + Exonic hg19 OV TCGA-25-1623 5 In-Frame Intra-chr p13.13 p13.13 AGC:MAST Seq+ 9592 ChimerSeq FusionScan TCGA_RNA-Seq SPRED3-RFXANK SPRED3 chr19 38885116 + RFXANK chr19 19304747 + Exonic hg19 OV TCGA-25-1623 2 3'UTR-5'UTR Intra-chr q13.2 p13.11 9593 ChimerSeq FusionScan TCGA_RNA-Seq PDXDC1-VAC14 PDXDC1 chr16 15103616 + VAC14 chr16 70732714 - Exonic hg19 OV TCGA-13-1496 3 Out-of-Frame Intra-chr p13.11 q22.2 9594 ChimerSeq FusionScan TCGA_RNA-Seq FAM118B-HPRT1 FAM118B chr11 126110939 + HPRT1 chrX 133634059 + Exonic hg19 OV TCGA-13-1496 2 In-Frame Inter-chr q24.2 q26.2 9595 ChimerSeq FusionScan TCGA_RNA-Seq MATR3-UBE2D2 MATR3 chr5 138658656 + UBE2D2 chr5 138979956 + Exonic hg19 OV TCGA-13-0724 8 In-Frame Intra-chr q31.2 q31.2 Seq+ 9596 ChimerSeq FusionScan TCGA_RNA-Seq ZNRF1-ZBTB7A ZNRF1 chr16 75140469 + ZBTB7A chr19 4055245 - Exonic hg19 OV TCGA-13-0724 3 3'UTR-5'UTR Inter-chr q23.1 p13.3 Transcription factor 9597 ChimerSeq FusionScan TCGA_RNA-Seq TRAF3-IL29 TRAF3 chr14 103244012 + IL29 chr19 39787444 + Exonic hg19 OV TCGA-13-0724 2 5'UTR-CDS Inter-chr q32.32 9598 ChimerSeq FusionScan TCGA_RNA-Seq STK11-HOXD4 STK11 chr19 1207202 + HOXD4 chr2 177017335 + Exonic hg19 OV TCGA-13-0724 2 Out-of-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene q31.1 Transcription factor 9599 ChimerSeq FusionScan TCGA_RNA-Seq RASA2-SUCNR1 RASA2 chr3 141235273 + SUCNR1 chr3 151597639 + Exonic hg19 OV TCGA-09-1669 9 CDS-5'UTR Intra-chr q23 q25.1 Seq+ 9600 ChimerSeq FusionScan TCGA_RNA-Seq PAK1-KCTD21 PAK1 chr11 77066712 - KCTD21 chr11 77885629 - Exonic hg19 OV TCGA-09-1669 3 CDS-5'UTR Intra-chr q14.1 STE:STE20 q14.1 Seq+ 9601 ChimerSeq FusionScan TCGA_RNA-Seq MTMR1-LRIF1 MTMR1 chrX 149867773 + LRIF1 chr1 111492745 - Exonic hg19 OV TCGA-09-1669 2 In-Frame Inter-chr q28 p13.3 9602 ChimerSeq FusionScan TCGA_RNA-Seq FAM13B-HSP90AA1 FAM13B chr5 137368470 - HSP90AA1 chr14 102548781 - Exonic hg19 OV TCGA-09-1669 2 5'UTR-CDS Inter-chr q31.2 q32.31 Oncogene 9603 ChimerSeq FusionScan TCGA_RNA-Seq PDCL3-IMPA2 PDCL3 chr2 101179535 + IMPA2 chr18 12030341 + Exonic hg19 OV TCGA-09-1669 2 Out-of-Frame Inter-chr q11.2 p11.21 9604 ChimerSeq FusionScan TCGA_RNA-Seq UNC45A-IQGAP1 UNC45A chr15 91483703 + IQGAP1 chr15 91029261 + Exonic hg19 OV TCGA-24-2023 15 In-Frame Intra-chr q26.1 q26.1 Seq+ 9605 ChimerSeq FusionScan TCGA_RNA-Seq GMEB1-TRNAU1AP GMEB1 chr1 28995351 + TRNAU1AP chr1 28897687 + Exonic hg19 OV TCGA-24-2023 13 5'UTR-5'UTR Intra-chr p35.3 Transcription factor p35.3 Seq+ 9606 ChimerSeq FusionScan TCGA_RNA-Seq GMEB1-TRNAU1AP GMEB1 chr1 28995351 + TRNAU1AP chr1 28898378 + Exonic hg19 OV TCGA-24-2023 7 5'UTR-5'UTR Intra-chr p35.3 Transcription factor p35.3 Seq+ 9607 ChimerSeq FusionScan TCGA_RNA-Seq SFMBT1-TKT SFMBT1 chr3 53079831 - TKT chr3 53276258 - Exonic hg19 OV TCGA-24-2023 7 5'UTR-CDS Intra-chr p21.1 p21.1 Tumor suppressor gene Seq+ 9608 ChimerSeq FusionScan TCGA_RNA-Seq ANLN-EEPD1 ANLN chr7 36459088 + EEPD1 chr7 36320723 + Exonic hg19 OV TCGA-24-2023 5 In-Frame Intra-chr p14.2 p14.2 Seq+ 9609 ChimerSeq FusionScan TCGA_RNA-Seq RNF214-PAFAH1B2 RNF214 chr11 117115301 + PAFAH1B2 chr11 117042337 + Exonic hg19 OV TCGA-24-2023 5 In-Frame Intra-chr q23.3 q23.3 Seq+ 9610 ChimerSeq FusionScan TCGA_RNA-Seq USP32-NPTN USP32 chr17 58469242 - NPTN chr15 73866136 - Exonic hg19 OV TCGA-24-2023 5 In-Frame Inter-chr q23.2 q24.1 Seq+ 9611 ChimerSeq FusionScan TCGA_RNA-Seq MXD1-ANTXR1 MXD1 chr2 70148897 + ANTXR1 chr2 69267175 + Exonic hg19 OV TCGA-24-2023 4 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 9612 ChimerSeq FusionScan TCGA_RNA-Seq NUMA1-ZNF705D NUMA1 chr11 71780887 - ZNF705D chr8 11965631 + Exonic hg19 OV TCGA-24-2023 3 5'UTR-5'UTR Inter-chr q13.4 Oncogene p23.1 Transcription factor 9613 ChimerSeq FusionScan TCGA_RNA-Seq PDIA5-CASR PDIA5 chr3 122829851 + CASR chr3 121972794 + Exonic hg19 OV TCGA-24-2023 3 5'UTR-5'UTR Intra-chr q21.1 q13.33 Seq+ 9614 ChimerSeq FusionScan TCGA_RNA-Seq PIK3R3-RDH10 PIK3R3 chr1 46597518 - RDH10 chr8 74209428 + Exonic hg19 OV TCGA-24-2023 2 In-Frame Inter-chr p34.1 q21.11 Seq+ 9615 ChimerSeq FusionScan TCGA_RNA-Seq GON4L-RIT1 GON4L chr1 155790396 - RIT1 chr1 155874595 - Exonic hg19 OV TCGA-24-2023 2 Out-of-Frame Intra-chr q22 q22 Seq+ 9616 ChimerSeq FusionScan TCGA_RNA-Seq GBX1-PRKAG2 GBX1 chr7 150864097 - PRKAG2 chr7 151372723 - Exonic hg19 OV TCGA-24-2023 2 In-Frame Intra-chr q36.1 Transcription factor q36.1 Seq+ 9617 ChimerSeq FusionScan TCGA_RNA-Seq PUM1-YARS PUM1 chr1 31501642 - YARS chr1 33276658 - Exonic hg19 OV TCGA-24-2023 2 In-Frame Intra-chr p35.2 p35.1 Seq+ 9618 ChimerSeq FusionScan TCGA_RNA-Seq RPS16-EIF3K RPS16 chr19 39926246 - EIF3K chr19 39123069 + Exonic hg19 OV TCGA-25-2404 2 3'UTR-CDS Intra-chr q13.2 9619 ChimerSeq FusionScan TCGA_RNA-Seq SSR3-CLU SSR3 chr3 156271443 - CLU chr8 27455767 - Exonic hg19 OV TCGA-04-1536 2 In-Frame Inter-chr q25.31 p21.1 Tumor suppressor gene 9620 ChimerSeq FusionScan TCGA_RNA-Seq TTLL5-IFT43 TTLL5 chr14 76368567 + IFT43 chr14 76455227 + Exonic hg19 OV TCGA-09-1670 3 Out-of-Frame Intra-chr q24.3 q24.3 Seq+ 9621 ChimerSeq FusionScan TCGA_RNA-Seq PEAR1-ARFGAP2 PEAR1 chr1 156880172 + ARFGAP2 chr11 47193884 - Exonic hg19 OV TCGA-09-1670 2 In-Frame Inter-chr q23.1 p11.2 9622 ChimerSeq FusionScan TCGA_RNA-Seq RALY-TTC27 RALY chr20 32619410 + TTC27 chr2 33042523 + Exonic hg19 OV TCGA-09-1670 2 5'UTR-CDS Inter-chr q11.22 p22.3 9623 ChimerSeq FusionScan TCGA_RNA-Seq RPS24-CAT RPS24 chr10 79797062 + CAT chr11 34473623 + Exonic hg19 OV TCGA-09-1670 2 Out-of-Frame Inter-chr q22.3 p13 Tumor suppressor gene 9624 ChimerSeq FusionScan TCGA_RNA-Seq CELSR1-TBC1D22A CELSR1 chr22 46929523 - TBC1D22A chr22 47507403 + Exonic hg19 OV TCGA-09-1670 2 Out-of-Frame Intra-chr q13.31 q13.31 9625 ChimerSeq FusionScan TCGA_RNA-Seq CAPZA2-LAMP1 CAPZA2 chr7 116502704 + LAMP1 chr13 113960799 + Exonic hg19 OV TCGA-09-1670 2 Out-of-Frame Inter-chr q31.2 q34 Oncogene 9626 ChimerSeq FusionScan TCGA_RNA-Seq CTIF-AGXT2L2 CTIF chr18 46163056 + AGXT2L2 chr5 177652430 - Exonic hg19 OV TCGA-09-1670 2 Out-of-Frame Inter-chr 9627 ChimerSeq FusionScan TCGA_RNA-Seq ZNF626-SBF1 ZNF626 chr19 20844249 - SBF1 chr22 50887079 - Exonic hg19 OV TCGA-09-1670 2 In-Frame Inter-chr p12 Transcription factor q13.33 9628 ChimerSeq FusionScan TCGA_RNA-Seq MUC16-SBNO2 MUC16 chr19 8968879 - SBNO2 chr19 1127764 - Exonic hg19 OV TCGA-09-1670 2 Out-of-Frame Intra-chr p13.2 p13.3 Seq+ 9629 ChimerSeq FusionScan TCGA_RNA-Seq HSPA8-GRIK5 HSPA8 chr11 122932771 - GRIK5 chr19 42546907 - Exonic hg19 OV TCGA-09-1670 2 5'UTR-CDS Inter-chr q24.1 q13.2 Seq+ 9630 ChimerSeq FusionScan TCGA_RNA-Seq HOOK2-MAST1 HOOK2 chr19 12881745 - MAST1 chr19 12958661 + Exonic hg19 OV TCGA-09-1668 4 Out-of-Frame Intra-chr p13.13 p13.13 AGC:MAST Seq+ 9631 ChimerSeq FusionScan TCGA_RNA-Seq CHMP4A-MPHOSPH8 CHMP4A chr14 24682614 - MPHOSPH8 chr13 20245345 + Exonic hg19 OV TCGA-09-1668 2 Out-of-Frame Inter-chr q12 q12.11 9632 ChimerSeq FusionScan TCGA_RNA-Seq R3HDM4-PLEKHA4 R3HDM4 chr19 913086 - PLEKHA4 chr19 49344567 - Exonic hg19 OV TCGA-29-1783 18 Out-of-Frame Intra-chr p13.3 q13.33 Seq+ 9633 ChimerSeq FusionScan TCGA_RNA-Seq R3HDM4-PLEKHA4 R3HDM4 chr19 913086 - PLEKHA4 chr19 49341386 - Exonic hg19 OV TCGA-29-1783 8 In-Frame Intra-chr p13.3 q13.33 Seq+ 9634 ChimerSeq FusionScan TCGA_RNA-Seq PRKCZ-SKI PRKCZ chr1 1991030 + SKI chr1 2234416 + Exonic hg19 OV TCGA-29-1783 7 Out-of-Frame Intra-chr p36.33 p36.33 Transcription factor Seq+ 9635 ChimerSeq FusionScan TCGA_RNA-Seq UBXN6-GRM4 UBXN6 chr19 4452360 - GRM4 chr6 34008525 - Exonic hg19 OV TCGA-29-1783 3 Out-of-Frame Inter-chr p13.3 p21.31 Seq+ 9636 ChimerSeq FusionScan TCGA_RNA-Seq ADNP-KCNG1 ADNP chr20 49547362 - KCNG1 chr20 49626901 - Exonic hg19 OV TCGA-29-1783 3 5'UTR-5'UTR Intra-chr q13.13 Transcription factor q13.13 Seq+ 9637 ChimerSeq FusionScan TCGA_RNA-Seq R3HDM4-PLEKHA4 R3HDM4 chr19 913086 - PLEKHA4 chr19 49342520 - Exonic hg19 OV TCGA-29-1783 3 Out-of-Frame Intra-chr p13.3 q13.33 Seq+ 9638 ChimerSeq FusionScan TCGA_RNA-Seq SMYD2-KCNK2 SMYD2 chr1 214454770 + KCNK2 chr1 215259710 + Exonic hg19 OV TCGA-29-1783 2 Out-of-Frame Intra-chr q32.3 q41 Seq+ 9639 ChimerSeq FusionScan TCGA_RNA-Seq TMX2-CTNND1 TMX2 chr11 57505140 + CTNND1 chr11 57561481 + Exonic hg19 OV TCGA-29-1783 2 Out-of-Frame Intra-chr q12.1 q12.1 Tumor suppressor gene 9640 ChimerSeq FusionScan TCGA_RNA-Seq UNC5A-TTC38 UNC5A chr5 176237821 + TTC38 chr22 46681137 + Exonic hg19 OV TCGA-36-1570 5 Out-of-Frame Inter-chr q35.2 Tumor suppressor gene q13.31 Seq+ 9641 ChimerSeq FusionScan TCGA_RNA-Seq C20orf7-ESF1 C20orf7 chr20 13775587 + ESF1 chr20 13756916 - Exonic hg19 OV TCGA-36-1570 4 Out-of-Frame Intra-chr p12.1 9642 ChimerSeq FusionScan TCGA_RNA-Seq AMY2A-RNPC3 AMY2A chr1 104161730 + RNPC3 chr1 104088869 + Exonic hg19 OV TCGA-36-1570 2 Out-of-Frame Intra-chr p21.1 p21.1 9643 ChimerSeq FusionScan TCGA_RNA-Seq BBS1-DDB2 BBS1 chr11 66291353 + DDB2 chr11 47259387 + Exonic hg19 OV TCGA-36-1570 2 In-Frame Intra-chr q13.2 p11.2 Oncogene Tumor suppressor gene 9644 ChimerSeq FusionScan TCGA_RNA-Seq SLC30A9-NAP1L1 SLC30A9 chr4 42025401 + NAP1L1 chr12 76441498 - Exonic hg19 OV TCGA-36-1570 2 CDS-3'UTR Inter-chr p13 q21.2 9645 ChimerSeq FusionScan TCGA_RNA-Seq ARMC1-PRMT10 ARMC1 chr8 66534497 - PRMT10 chr4 148559898 - Exonic hg19 OV TCGA-36-1570 2 Out-of-Frame Inter-chr q13.1 9646 ChimerSeq FusionScan TCGA_RNA-Seq RASGRP1-TBC1D3F RASGRP1 chr15 38852021 - TBC1D3F chr17 36285543 + Exonic hg19 OV TCGA-61-1743 7 CDS-5'UTR Inter-chr q14 q12 9647 ChimerSeq FusionScan TCGA_RNA-Seq SPEG-MIRLET7BHG SPEG chr2 220329330 + MIRLET7BHG chr22 46493805 + Exonic hg19 OV TCGA-61-1743 5 CDS-5'UTR Inter-chr q35 CAMK:Trio q13.31 Seq+ 9648 ChimerSeq FusionScan TCGA_RNA-Seq VCL-KIAA0913 VCL chr10 75758133 + KIAA0913 chr10 75553345 + Exonic hg19 OV TCGA-61-1743 4 In-Frame Intra-chr q22.2 Seq+ 9649 ChimerSeq FusionScan TCGA_RNA-Seq RPL36-GAB2 RPL36 chr19 5690611 + GAB2 chr11 77936248 - Exonic hg19 OV TCGA-61-1743 3 Out-of-Frame Inter-chr p13.3 q14.1 9650 ChimerSeq FusionScan TCGA_RNA-Seq INTS4-CYP2R1 INTS4 chr11 77602364 - CYP2R1 chr11 14907463 - Exonic hg19 OV TCGA-61-1743 3 In-Frame Intra-chr q14.1 p15.2 9651 ChimerSeq FusionScan TCGA_RNA-Seq ZNF627-THRAP3 ZNF627 chr19 11708445 + THRAP3 chr1 36756974 + Exonic hg19 OV TCGA-61-1743 2 Out-of-Frame Inter-chr p13.2 Transcription factor p34.3 9652 ChimerSeq FusionScan TCGA_RNA-Seq NFX1-DNAJA1 NFX1 chr9 33328676 + DNAJA1 chr9 33034213 + Exonic hg19 OV TCGA-61-1743 2 Out-of-Frame Intra-chr p13.3 Transcription factor p21.1 Seq+ 9653 ChimerSeq FusionScan TCGA_RNA-Seq SLC18B1-STAT1 SLC18B1 chr6 133119552 - STAT1 chr2 191854400 - Exonic hg19 OV TCGA-61-1743 2 Out-of-Frame Inter-chr q23.2 q32.2 Tumor suppressor gene Transcription factor 9654 ChimerSeq FusionScan TCGA_RNA-Seq THRA-NR1D1 THRA chr17 38244753 + NR1D1 chr17 38249535 - Exonic hg19 OV TCGA-61-1743 2 In-Frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Transcription factor 9655 ChimerSeq FusionScan TCGA_RNA-Seq PRRC2C-LRCH4 PRRC2C chr1 171548605 + LRCH4 chr7 100179790 - Exonic hg19 OV TCGA-61-1743 2 Out-of-Frame Inter-chr q24.3 q22.1 9656 ChimerSeq FusionScan TCGA_RNA-Seq AFF1-UBR5 AFF1 chr4 87928576 + UBR5 chr8 103373854 - Exonic hg19 OV TCGA-61-1743 2 In-Frame Inter-chr q21.3 Oncogene q22.3 Oncogene 9657 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D10A-OSBP2 TBC1D10A chr22 30722661 - OSBP2 chr22 31266415 + Exonic hg19 OV TCGA-61-1743 2 Out-of-Frame Intra-chr q12.2 q12.2 Seq+ 9658 ChimerSeq FusionScan TCGA_RNA-Seq ACTL6A-UBL5 ACTL6A chr3 179292255 + UBL5 chr19 9939267 + Exonic hg19 OV TCGA-61-1743 2 In-Frame Inter-chr q26.33 p13.2 Tumor suppressor gene 9659 ChimerSeq FusionScan TCGA_RNA-Seq HCG18-TRIM26 HCG18 chr6 30263908 - TRIM26 chr6 30172542 - Exonic hg19 OV TCGA-61-1743 2 5'UTR-5'UTR Intra-chr Seq+ 9660 ChimerSeq FusionScan TCGA_RNA-Seq PRR13-ESPL1 PRR13 chr12 53835576 + ESPL1 chr12 53662538 + Exonic hg19 OV TCGA-61-1743 2 5'UTR-5'UTR Intra-chr q13.13 q13.13 9661 ChimerSeq FusionScan TCGA_RNA-Seq PHYH-FAM211B PHYH chr10 13337495 - FAM211B chr22 24985917 - Exonic hg19 OV TCGA-61-1743 2 Out-of-Frame Inter-chr p13 9662 ChimerSeq FusionScan TCGA_RNA-Seq CSDE1-RBFOX1 CSDE1 chr1 115292441 - RBFOX1 chr16 7568148 + Exonic hg19 OV TCGA-31-1946 2 5'UTR-CDS Inter-chr p13.2 p13.3 Seq+ 9663 ChimerSeq FusionScan TCGA_RNA-Seq SRGAP3-PTTG1 SRGAP3 chr3 9290568 - PTTG1 chr5 159849308 + Exonic hg19 OV TCGA-13-0885 3 CDS-5'UTR Inter-chr p25.3 Tumor suppressor gene q33.3 Seq+ 9664 ChimerSeq FusionScan TCGA_RNA-Seq IPO7-DLG1 IPO7 chr11 9459832 + DLG1 chr3 196778539 - Exonic hg19 OV TCGA-13-0885 2 Out-of-Frame Inter-chr p15.4 q29 Tumor suppressor gene 9665 ChimerSeq FusionScan TCGA_RNA-Seq SF1-C11orf85 SF1 chr11 64540901 - C11orf85 chr11 64706045 - Exonic hg19 OV TCGA-61-1917 16 CDS-3'UTR Intra-chr q13.1 Seq+ 9666 ChimerSeq FusionScan TCGA_RNA-Seq AGPAT3-SOAT2 AGPAT3 chr21 45323900 + SOAT2 chr12 53509880 + Exonic hg19 OV TCGA-61-1917 10 5'UTR-CDS Inter-chr q22.3 q13.13 Seq+ 9667 ChimerSeq FusionScan TCGA_RNA-Seq TMC6-TK1 TMC6 chr17 76124692 - TK1 chr17 76171699 - Exonic hg19 OV TCGA-61-1917 9 5'UTR-CDS Intra-chr q25.3 q25.3 Seq+ 9668 ChimerSeq FusionScan TCGA_RNA-Seq GRB10-CSTF3 GRB10 chr7 50771517 - CSTF3 chr11 33108687 - Exonic hg19 OV TCGA-61-1917 5 Out-of-Frame Inter-chr p12.1 p13 Seq+ 9669 ChimerSeq FusionScan TCGA_RNA-Seq RNF185-INPP5J RNF185 chr22 31556289 + INPP5J chr22 31529083 + Exonic hg19 OV TCGA-61-1917 4 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 9670 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1199-LRRC49 KIAA1199 chr15 81224380 + LRRC49 chr15 71229099 + Exonic hg19 OV TCGA-61-1917 4 In-Frame Intra-chr q23 Seq+ 9671 ChimerSeq FusionScan TCGA_RNA-Seq RNF4-FAM193A RNF4 chr4 2498848 + FAM193A chr4 2664564 + Exonic hg19 OV TCGA-61-1917 3 Out-of-Frame Intra-chr p16.3 p16.3 Seq+ 9672 ChimerSeq FusionScan TCGA_RNA-Seq SRGAP2P2-MAPKAPK2 SRGAP2P2 chr1 143916308 + MAPKAPK2 chr1 206904482 + Exonic hg19 OV TCGA-61-1917 3 5'UTR-CDS Intra-chr q32.1 CAMK:MAPKAPK 9673 ChimerSeq FusionScan TCGA_RNA-Seq GLG1-CIAPIN1 GLG1 chr16 74640554 - CIAPIN1 chr16 57474895 - Exonic hg19 OV TCGA-61-1917 3 CDS-5'UTR Intra-chr q23.1 q21 9674 ChimerSeq FusionScan TCGA_RNA-Seq KPNB1-SLC25A3 KPNB1 chr17 45738544 + SLC25A3 chr12 98991633 + Exonic hg19 OV TCGA-61-1917 2 In-Frame Inter-chr q21.32 q23.1 9675 ChimerSeq FusionScan TCGA_RNA-Seq MECOM-SLC7A14 MECOM chr3 169381123 - SLC7A14 chr3 170219134 - Exonic hg19 OV TCGA-61-1917 2 In-Frame Intra-chr q26.2 Transcription factor q26.2 Seq+ 9676 ChimerSeq FusionScan TCGA_RNA-Seq SYVN1-NDUFS8 SYVN1 chr11 64900940 - NDUFS8 chr11 67803719 + Exonic hg19 OV TCGA-61-1917 2 In-Frame Intra-chr q13.1 q13.2 9677 ChimerSeq FusionScan TCGA_RNA-Seq NUCB1-TOMM5 NUCB1 chr19 49409142 + TOMM5 chr9 37588929 - Exonic hg19 OV TCGA-61-1917 2 In-Frame Inter-chr q13.33 p13.2 9678 ChimerSeq FusionScan TCGA_RNA-Seq BIK-YLPM1 BIK chr22 43506809 + YLPM1 chr14 75287759 + Exonic hg19 OV TCGA-61-1917 2 5'UTR-CDS Inter-chr q13.2 Tumor suppressor gene q24.3 9679 ChimerSeq FusionScan TCGA_RNA-Seq AKAP13-C15orf44 AKAP13 chr15 85924029 + C15orf44 chr15 65884069 - Exonic hg19 OV TCGA-61-1917 2 5'UTR-CDS Intra-chr q25.3 9680 ChimerSeq FusionScan TCGA_RNA-Seq AGPAT3-SOAT2 AGPAT3 chr21 45323900 + SOAT2 chr12 53509173 + Exonic hg19 OV TCGA-61-1917 2 5'UTR-CDS Inter-chr q22.3 q13.13 Seq+ 9681 ChimerSeq FusionScan TCGA_RNA-Seq KDM2B-BCAS3 KDM2B chr12 121883077 - BCAS3 chr17 59469337 + Exonic hg19 OV TCGA-61-1917 2 Out-of-Frame Inter-chr q24.31 Transcription factor q23.2 9682 ChimerSeq FusionScan TCGA_RNA-Seq RORA-NAP1L1 RORA chr15 61521251 - NAP1L1 chr12 76468019 - Exonic hg19 OV TCGA-61-1917 2 CDS-5'UTR Inter-chr q22.2 Transcription factor q21.2 9683 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-GALNTL5 MLL3 chr7 152132710 - GALNTL5 chr7 151699798 + Exonic hg19 OV TCGA-61-1917 2 Out-of-Frame Intra-chr Tumor suppressor gene q36.1 Seq+ 9684 ChimerSeq FusionScan TCGA_RNA-Seq CDK13-C7orf10 CDK13 chr7 40041630 + C7orf10 chr7 40277233 + Exonic hg19 OV TCGA-61-1917 2 In-Frame Intra-chr p14.1 Seq+ 9685 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPR-TIA1 HNRNPR chr1 23664246 - TIA1 chr2 70444126 - Exonic hg19 OV TCGA-61-1917 2 In-Frame Inter-chr p13.3 9686 ChimerSeq FusionScan TCGA_RNA-Seq SPPL2B-DBN1 SPPL2B chr19 2345328 + DBN1 chr5 176886269 - Exonic hg19 OV TCGA-61-1917 2 Out-of-Frame Inter-chr p13.3 q35.3 9687 ChimerSeq FusionScan TCGA_RNA-Seq CCNE1-PSMA4 CCNE1 chr19 30311755 + PSMA4 chr15 78834824 + Exonic hg19 OV TCGA-61-1917 2 Out-of-Frame Inter-chr q12 Oncogene q25.1 9688 ChimerSeq FusionScan TCGA_RNA-Seq ZNF428-ETHE1 ZNF428 chr19 44123709 - ETHE1 chr19 44015718 - Exonic hg19 OV TCGA-09-1674 8 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.31 Seq+ 9689 ChimerSeq FusionScan TCGA_RNA-Seq ZNF420-SIPA1L3 ZNF420 chr19 37582023 + SIPA1L3 chr19 38590601 + Exonic hg19 OV TCGA-09-1674 5 Out-of-Frame Intra-chr q13.12 Transcription factor q13.13 Seq+ 9690 ChimerSeq FusionScan TCGA_RNA-Seq GPCPD1-ZNF385D GPCPD1 chr20 5573972 - ZNF385D chr3 21706520 - Exonic hg19 OV TCGA-09-1674 3 Out-of-Frame Inter-chr p12.3 p24.3 Transcription factor 9691 ChimerSeq FusionScan TCGA_RNA-Seq PHACTR4-SCMH1 PHACTR4 chr1 28696336 + SCMH1 chr1 41541123 - Exonic hg19 OV TCGA-09-1674 3 5'UTR-CDS Intra-chr p35.3 Tumor suppressor gene p34.2 Transcription factor Seq+ 9692 ChimerSeq FusionScan TCGA_RNA-Seq CCT7-ALMS1 CCT7 chr2 73461512 + ALMS1 chr2 73716760 + Exonic hg19 OV TCGA-09-1674 2 In-Frame Intra-chr p13.2 p13.1 Seq+ 9693 ChimerSeq FusionScan TCGA_RNA-Seq PSIP1-ERGIC1 PSIP1 chr9 15506558 - ERGIC1 chr5 172377711 + Exonic hg19 OV TCGA-61-1995 2 Out-of-Frame Inter-chr p22.3 Oncogene q35.1 9694 ChimerSeq FusionScan TCGA_RNA-Seq JAZF1-SLAIN2 JAZF1 chr7 28220081 - SLAIN2 chr4 48371865 + Exonic hg19 OV TCGA-61-1995 2 Out-of-Frame Inter-chr p15.1 Transcription factor p11 9695 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152480271 + Exonic hg19 OV TCGA-61-1995 2 Out-of-Frame Intra-chr q36.1 Seq+ 9696 ChimerSeq FusionScan TCGA_RNA-Seq SMARCC1-MAP4 SMARCC1 chr3 47814306 - MAP4 chr3 47899002 - Exonic hg19 OV TCGA-61-1995 2 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 9697 ChimerSeq FusionScan TCGA_RNA-Seq BMP7-DYNC2LI1 BMP7 chr20 55777530 - DYNC2LI1 chr2 44031780 + Exonic hg19 OV TCGA-29-2414 5 In-Frame Inter-chr q13.31 p21 Seq+ 9698 ChimerSeq FusionScan TCGA_RNA-Seq MOB3B-LINGO2 MOB3B chr9 27529552 - LINGO2 chr9 27950704 - Exonic hg19 OV TCGA-29-2414 2 5'UTR-5'UTR Intra-chr p21.2 p21.1 9699 ChimerSeq FusionScan TCGA_RNA-Seq RPS6-DPP10 RPS6 chr9 19380187 - DPP10 chr2 116066814 + Exonic hg19 OV TCGA-29-2414 2 3'UTR-CDS Inter-chr p22.1 q14.1 9700 ChimerSeq FusionScan TCGA_RNA-Seq PSAP-SGPL1 PSAP chr10 73610938 - SGPL1 chr10 72617370 + Exonic hg19 OV TCGA-29-1766 2 In-Frame Intra-chr q22.1 q22.1 9701 ChimerSeq FusionScan TCGA_RNA-Seq CEP44-FBXO8 CEP44 chr4 175205212 + FBXO8 chr4 175184251 - Exonic hg19 OV TCGA-29-1766 2 5'UTR-5'UTR Intra-chr q34.1 q34.1 9702 ChimerSeq FusionScan TCGA_RNA-Seq CCNY-CUL2 CCNY chr10 35790463 + CUL2 chr10 35360267 - Exonic hg19 OV TCGA-29-1766 2 Out-of-Frame Intra-chr p11.21 p11.21 Tumor suppressor gene 9703 ChimerSeq FusionScan TCGA_RNA-Seq ZNF586-EIF4A1 ZNF586 chr19 58288037 + EIF4A1 chr17 7478436 + Exonic hg19 OV TCGA-29-1766 2 In-Frame Inter-chr q13.43 Transcription factor p13.1 9704 ChimerSeq FusionScan TCGA_RNA-Seq B4GALT1-STRA8 B4GALT1 chr9 33166755 - STRA8 chr7 134925270 + Exonic hg19 OV TCGA-23-1026 4 Out-of-Frame Inter-chr p21.1 q33 Seq+ 9705 ChimerSeq FusionScan TCGA_RNA-Seq EPB41L1-C20orf152 EPB41L1 chr20 34700402 + C20orf152 chr20 34618278 + Exonic hg19 OV TCGA-23-1026 4 5'UTR-CDS Intra-chr q11.23 Seq+ 9706 ChimerSeq FusionScan TCGA_RNA-Seq BOLA3-MOB1A BOLA3 chr2 74374947 - MOB1A chr2 74386381 - Exonic hg19 OV TCGA-23-1026 2 Out-of-Frame Intra-chr p13.1 p13.1 Tumor suppressor gene 9707 ChimerSeq FusionScan TCGA_RNA-Seq SBF1-DOM3Z SBF1 chr22 50905766 - DOM3Z chr6 31937801 - Exonic hg19 OV TCGA-04-1655 2 CDS-5'UTR Inter-chr q13.33 9708 ChimerSeq FusionScan TCGA_RNA-Seq SEC62-C6orf130 SEC62 chr3 169684646 + C6orf130 chr6 41039414 - Exonic hg19 OV TCGA-13-1505 3 CDS-5'UTR Inter-chr q26.2 9709 ChimerSeq FusionScan TCGA_RNA-Seq PEX6-PPP2R5D PEX6 chr6 42946006 - PPP2R5D chr6 42957348 + Exonic hg19 OV TCGA-13-1505 2 In-Frame Intra-chr p21.1 p21.1 Seq+ 9710 ChimerSeq FusionScan TCGA_RNA-Seq MYO9B-TECR MYO9B chr19 17186684 + TECR chr19 14673336 + Exonic hg19 OV TCGA-13-1505 2 5'UTR-5'UTR Intra-chr p13.11 p13.12 Seq+ 9711 ChimerSeq FusionScan TCGA_RNA-Seq PTPRS-RGS6 PTPRS chr19 5286060 - RGS6 chr14 72818802 + Exonic hg19 OV TCGA-09-0369 4 Out-of-Frame Inter-chr p13.3 q24.2 Seq+ 9712 ChimerSeq FusionScan TCGA_RNA-Seq PPP4R2-AHRR PPP4R2 chr3 73047309 + AHRR chr5 422843 + Exonic hg19 OV TCGA-09-0369 3 Out-of-Frame Inter-chr p13 p15.33 Tumor suppressor gene Transcription factor Seq+ 9713 ChimerSeq FusionScan TCGA_RNA-Seq PBX1-LRP8 PBX1 chr1 164761975 + LRP8 chr1 53730068 - Exonic hg19 OV TCGA-09-0369 2 Out-of-Frame Intra-chr q23.3 Oncogene Transcription factor p32.3 9714 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF11-CIT ARHGEF11 chr1 157014090 - CIT chr12 120173162 - Exonic hg19 OV TCGA-09-0369 2 Out-of-Frame Inter-chr q23.1 q24.23 9715 ChimerSeq FusionScan TCGA_RNA-Seq KIRREL-FHL2 KIRREL chr1 157963518 + FHL2 chr2 105990190 - Exonic hg19 OV TCGA-09-0369 2 Out-of-Frame Inter-chr q23.1 q12.2 9716 ChimerSeq FusionScan TCGA_RNA-Seq RANGAP1-PPPDE2 RANGAP1 chr22 41676936 - PPPDE2 chr22 42003865 - Exonic hg19 OV TCGA-04-1356 10 In-Frame Intra-chr q13.2 9717 ChimerSeq FusionScan TCGA_RNA-Seq DAK-TMEM109 DAK chr11 61113418 + TMEM109 chr11 60687157 + Exonic hg19 OV TCGA-04-1356 4 CDS-5'UTR Intra-chr q12.2 Seq+ 9718 ChimerSeq FusionScan TCGA_RNA-Seq C1orf159-GNB1 C1orf159 chr1 1051439 - GNB1 chr1 1749314 - Exonic hg19 OV TCGA-04-1356 4 5'UTR-CDS Intra-chr p36.33 p36.33 9719 ChimerSeq FusionScan TCGA_RNA-Seq ADD1-SH3BP2 ADD1 chr4 2845751 + SH3BP2 chr4 2822340 + Exonic hg19 OV TCGA-04-1356 4 5'UTR-5'UTR Intra-chr p16.3 p16.3 Seq+ 9720 ChimerSeq FusionScan TCGA_RNA-Seq SAR1A-NODAL SAR1A chr10 71920759 - NODAL chr10 72195739 - Exonic hg19 OV TCGA-04-1356 3 In-Frame Intra-chr q22.1 q22.1 Seq+ 9721 ChimerSeq FusionScan TCGA_RNA-Seq UST-MYB UST chr6 149208165 + MYB chr6 135539001 + Exonic hg19 OV TCGA-04-1356 3 In-Frame Intra-chr q25.1 q23.3 Oncogene Transcription factor Seq+ 9722 ChimerSeq FusionScan TCGA_RNA-Seq SCEL-LMO7 SCEL chr13 78130848 + LMO7 chr13 76427227 + Exonic hg19 OV TCGA-04-1356 3 In-Frame Intra-chr q22.3 q22.2 Seq+ 9723 ChimerSeq FusionScan TCGA_RNA-Seq MCPH1-S100A7A MCPH1 chr8 6357450 + S100A7A chr1 153390541 + Exonic hg19 OV TCGA-04-1356 2 CDS-5'UTR Inter-chr p23.1 Tumor suppressor gene q21.3 9724 ChimerSeq FusionScan TCGA_RNA-Seq TPM2-BAIAP2 TPM2 chr9 35684242 - BAIAP2 chr17 79077301 + Exonic hg19 OV TCGA-04-1356 2 Out-of-Frame Inter-chr p13.3 q25.3 9725 ChimerSeq FusionScan TCGA_RNA-Seq INSR-EIF6 INSR chr19 7267355 - EIF6 chr20 33868632 - Exonic hg19 OV TCGA-04-1356 2 In-Frame Inter-chr p13.2 TK:InsR q11.22 Seq+ 9726 ChimerSeq FusionScan TCGA_RNA-Seq TMX2-CTNND1 TMX2 chr11 57506732 + CTNND1 chr11 57561481 + Exonic hg19 OV TCGA-04-1356 2 In-Frame Intra-chr q12.1 q12.1 Tumor suppressor gene 9727 ChimerSeq FusionScan TCGA_RNA-Seq ARID1A-NUDC ARID1A chr1 27059283 + NUDC chr1 27267947 + Exonic hg19 OV TCGA-24-1928 9 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 Seq+ 9728 ChimerSeq FusionScan TCGA_RNA-Seq SMARCA4-CARM1 SMARCA4 chr19 11071850 + CARM1 chr19 11022859 + Exonic hg19 OV TCGA-24-1928 7 5'UTR-CDS Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 9729 ChimerSeq FusionScan TCGA_RNA-Seq SRP68-EXOC7 SRP68 chr17 74053483 - EXOC7 chr17 74090662 - Exonic hg19 OV TCGA-24-1928 4 Out-of-Frame Intra-chr q25.1 q25.1 Seq+ 9730 ChimerSeq FusionScan TCGA_RNA-Seq SRP68-EXOC7 SRP68 chr17 74063297 - EXOC7 chr17 74094099 - Exonic hg19 OV TCGA-24-1928 3 Out-of-Frame Intra-chr q25.1 q25.1 Seq+ 9731 ChimerSeq FusionScan TCGA_RNA-Seq AMDHD2-SLC25A33 AMDHD2 chr16 2579096 + SLC25A33 chr1 9613683 + Exonic hg19 OV TCGA-24-1928 2 Out-of-Frame Inter-chr p13.3 p36.22 9732 ChimerSeq FusionScan TCGA_RNA-Seq CTDP1-ZNF271 CTDP1 chr18 77473138 + ZNF271 chr18 32885939 + Exonic hg19 OV TCGA-24-1928 2 CDS-5'UTR Intra-chr 9733 ChimerSeq FusionScan TCGA_RNA-Seq DSC2-NINL DSC2 chr18 28666538 - NINL chr20 25507234 - Exonic hg19 OV TCGA-24-1928 2 CDS-5'UTR Inter-chr q12.1 Tumor suppressor gene p11.21 Seq+ 9734 ChimerSeq FusionScan TCGA_RNA-Seq TSNARE1-FOXO3 TSNARE1 chr8 143484464 - FOXO3 chr6 108984657 + Exonic hg19 OV TCGA-13-1492 2 5'UTR-CDS Inter-chr q24.3 q21 Oncogene Tumor suppressor gene Transcription factor 9735 ChimerSeq FusionScan TCGA_RNA-Seq CSNK2A1-CDKN2A CSNK2A1 chr20 524315 - CDKN2A chr9 21971207 - Exonic hg19 OV TCGA-13-1492 2 5'UTR-CDS Inter-chr p13 Oncogene p21.3 Oncogene Tumor suppressor gene 9736 ChimerSeq FusionScan TCGA_RNA-Seq ALS2CR8-LIMS1 ALS2CR8 chr2 203807690 + LIMS1 chr2 109276060 + Exonic hg19 OV TCGA-13-1492 2 Out-of-Frame Intra-chr q12.3 9737 ChimerSeq FusionScan TCGA_RNA-Seq PCGF5-RPP30 PCGF5 chr10 93021181 + RPP30 chr10 92655636 + Exonic hg19 OV TCGA-13-0911 21 In-Frame Intra-chr q23.32 q23.31 Seq+ 9738 ChimerSeq FusionScan TCGA_RNA-Seq NT5C2-LINC00592 NT5C2 chr10 104934614 - LINC00592 chr12 52617229 + Exonic hg19 OV TCGA-13-0911 12 CDS-5'UTR Inter-chr q24.33 q13.13 Seq+ 9739 ChimerSeq FusionScan TCGA_RNA-Seq ADD1-FAM193A ADD1 chr4 2901162 + FAM193A chr4 2659529 + Exonic hg19 OV TCGA-13-0911 3 In-Frame Intra-chr p16.3 p16.3 Seq+ 9740 ChimerSeq FusionScan TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5463071 - RNF216 chr7 5692141 - Exonic hg19 OV TCGA-13-0911 2 5'UTR-CDS Intra-chr p22.1 p22.1 Seq+ 9741 ChimerSeq FusionScan TCGA_RNA-Seq PLXDC2-METTL3 PLXDC2 chr10 20466338 + METTL3 chr14 21967946 - Exonic hg19 OV TCGA-13-0911 2 In-Frame Inter-chr p12.31 q11.2 9742 ChimerSeq FusionScan TCGA_RNA-Seq IGFL2-NNMT IGFL2 chr19 46652294 + NNMT chr11 114182766 + Exonic hg19 OV TCGA-13-0911 2 Out-of-Frame Inter-chr q13.32 q23.2 9743 ChimerSeq FusionScan TCGA_RNA-Seq CCDC122-ENOX1 CCDC122 chr13 44448977 - ENOX1 chr13 44241680 - Exonic hg19 OV TCGA-13-0911 2 5'UTR-5'UTR Intra-chr q14.11 q14.11 Seq+ 9744 ChimerSeq FusionScan TCGA_RNA-Seq TLK1-PRPF40A TLK1 chr2 171917590 - PRPF40A chr2 153537850 - Exonic hg19 OV TCGA-29-2425 5 Out-of-Frame Intra-chr q31.1 Other:TLK q23.3 Seq+ 9745 ChimerSeq FusionScan TCGA_RNA-Seq EFR3A-NTF3 EFR3A chr8 132916569 + NTF3 chr12 5603359 + Exonic hg19 OV TCGA-29-2425 2 Out-of-Frame Inter-chr q24.22 p13.31 9746 ChimerSeq FusionScan TCGA_RNA-Seq PSMA6-SRP54 PSMA6 chr14 35761758 + SRP54 chr14 35476488 + Exonic hg19 OV TCGA-29-1770 3 Out-of-Frame Intra-chr q13.2 q13.2 Seq+ 9747 ChimerSeq FusionScan TCGA_RNA-Seq LYPD6B-C14orf159 LYPD6B chr2 149895315 + C14orf159 chr14 91623982 + Exonic hg19 OV TCGA-29-1770 2 5'UTR-5'UTR Inter-chr q23.2 q32.11 9748 ChimerSeq FusionScan TCGA_RNA-Seq SLC25A32-SMYD3 SLC25A32 chr8 104427011 - SMYD3 chr1 246518396 - Exonic hg19 OV TCGA-29-1770 2 Out-of-Frame Inter-chr q22.3 q44 Transcription factor Seq+ 9749 ChimerSeq FusionScan TCGA_RNA-Seq NPEPPS-MLLT10 NPEPPS chr17 45608921 + MLLT10 chr10 21875222 + Exonic hg19 OV TCGA-29-1770 2 In-Frame Inter-chr q21.32 p12.31 Oncogene 9750 ChimerSeq FusionScan TCGA_RNA-Seq SLC25A32-SMYD3 SLC25A32 chr8 104419861 - SMYD3 chr1 246518396 - Exonic hg19 OV TCGA-29-1770 2 In-Frame Inter-chr q22.3 q44 Transcription factor Seq+ 9751 ChimerSeq FusionScan TCGA_RNA-Seq ACO2-TOB2 ACO2 chr22 41865186 + TOB2 chr22 41833411 - Exonic hg19 OV TCGA-29-1770 2 5'UTR-5'UTR Intra-chr q13.2 q13.2 9752 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT6 NDUFA11 chr19 5896463 - FUT6 chr19 5832590 - Exonic hg19 OV TCGA-29-1770 2 CDS-5'UTR Intra-chr p13.3 p13.3 9753 ChimerSeq FusionScan TCGA_RNA-Seq HYAL2-ZBTB4 HYAL2 chr3 50358796 - ZBTB4 chr17 7370646 - Exonic hg19 OV TCGA-24-2038 3 5'UTR-5'UTR Inter-chr p21.31 Tumor suppressor gene Transcription factor 9754 ChimerSeq FusionScan TCGA_RNA-Seq RPL3-PLXNB1 RPL3 chr22 39713465 - PLXNB1 chr3 48454578 - Exonic hg19 OV TCGA-24-2038 2 In-Frame Inter-chr q13.1 p21.31 9755 ChimerSeq FusionScan TCGA_RNA-Seq SSC5D-RPS16 SSC5D chr19 56002447 + RPS16 chr19 39924401 - Exonic hg19 OV TCGA-24-2038 2 CDS-3'UTR Intra-chr q13.42 q13.2 9756 ChimerSeq FusionScan TCGA_RNA-Seq PIK3R4-PARL PIK3R4 chr3 130463329 - PARL chr3 183562114 - Exonic hg19 OV TCGA-24-2038 2 In-Frame Intra-chr q22.1 Other:VPS15 q27.1 9757 ChimerSeq FusionScan TCGA_RNA-Seq GAPDH-UBC GAPDH chr12 6643735 + UBC chr12 125398320 - Exonic hg19 OV TCGA-24-2038 2 5'UTR-5'UTR Intra-chr p13.31 q24.31 9758 ChimerSeq FusionScan TCGA_RNA-Seq VPS72-LMNA VPS72 chr1 151158273 - LMNA chr1 156100407 + Exonic hg19 OV TCGA-24-2038 2 Out-of-Frame Intra-chr q21.3 q22 9759 ChimerSeq FusionScan TCGA_RNA-Seq AKAP13-SLCO3A1 AKAP13 chr15 85924029 + SLCO3A1 chr15 92638110 + Exonic hg19 OV TCGA-24-2038 2 5'UTR-CDS Intra-chr q25.3 q26.1 9760 ChimerSeq FusionScan TCGA_RNA-Seq KIF21A-NF1 KIF21A chr12 39726015 - NF1 chr17 29685986 + Exonic hg19 OV TCGA-24-2038 2 Out-of-Frame Inter-chr q12 q11.2 Oncogene Tumor suppressor gene 9761 ChimerSeq FusionScan TCGA_RNA-Seq DNAJB9-DENND5B DNAJB9 chr7 108212387 + DENND5B chr12 31648853 - Exonic hg19 OV TCGA-25-1317 2 In-Frame Inter-chr q31.1 p11.21 9762 ChimerSeq FusionScan TCGA_RNA-Seq ERN1-DHRSX ERN1 chr17 62149340 - DHRSX chrY 2134988 - Exonic hg19 OV TCGA-25-1317 2 Out-of-Frame Inter-chr q23.3 p22.33 9763 ChimerSeq FusionScan TCGA_RNA-Seq ZNF133-NADSYN1 ZNF133 chr20 18269248 + NADSYN1 chr11 71189440 + Exonic hg19 OV TCGA-25-1317 2 5'UTR-CDS Inter-chr p11.23 Transcription factor q13.4 9764 ChimerSeq FusionScan TCGA_RNA-Seq THSD4-BTBD6 THSD4 chr15 71953073 + BTBD6 chr14 105715118 + Exonic hg19 OV TCGA-25-1317 2 CDS-5'UTR Inter-chr q23 q32.33 9765 ChimerSeq FusionScan TCGA_RNA-Seq NEK7-CDC73 NEK7 chr1 198126406 + CDC73 chr1 193172924 + Exonic hg19 OV TCGA-25-1317 2 5'UTR-CDS Intra-chr q31.3 Other:NEK q31.2 Oncogene Tumor suppressor gene 9766 ChimerSeq FusionScan TCGA_RNA-Seq FOXJ3-CCDC23 FOXJ3 chr1 42800729 - CCDC23 chr1 43282251 - Exonic hg19 OV TCGA-13-0890 4 5'UTR-5'UTR Intra-chr p34.2 Transcription factor Seq+ 9767 ChimerSeq FusionScan TCGA_RNA-Seq CDK13-POU6F2 CDK13 chr7 39991451 + POU6F2 chr7 39446198 + Exonic hg19 OV TCGA-13-0890 2 Out-of-Frame Intra-chr p14.1 p14.1 Tumor suppressor gene Transcription factor Seq+ 9768 ChimerSeq FusionScan TCGA_RNA-Seq PGM2L1-CHRDL2 PGM2L1 chr11 74079536 - CHRDL2 chr11 74424524 - Exonic hg19 OV TCGA-13-0890 2 In-Frame Intra-chr q13.4 q13.4 Seq+ 9769 ChimerSeq FusionScan TCGA_RNA-Seq CDK13-POU6F2 CDK13 chr7 39991451 + POU6F2 chr7 39472675 + Exonic hg19 OV TCGA-13-0890 2 Out-of-Frame Intra-chr p14.1 p14.1 Tumor suppressor gene Transcription factor Seq+ 9770 ChimerSeq FusionScan TCGA_RNA-Seq TMEM201-RBP7 TMEM201 chr1 9657111 + RBP7 chr1 10075839 + Exonic hg19 OV TCGA-13-0890 2 In-Frame Intra-chr p36.22 p36.22 Seq+ 9771 ChimerSeq FusionScan TCGA_RNA-Seq MMP23B-DTX3 MMP23B chr1 1568734 + DTX3 chr12 58002859 + Exonic hg19 OV TCGA-13-0890 2 Out-of-Frame Inter-chr p36.33 q13.3 9772 ChimerSeq FusionScan TCGA_RNA-Seq TRIM27-PFDN4 TRIM27 chr6 28889668 - PFDN4 chr20 52835557 + Exonic hg19 OV TCGA-13-0890 2 5'UTR-CDS Inter-chr q13.2 9773 ChimerSeq FusionScan TCGA_RNA-Seq SRCRB4D-REC8 SRCRB4D chr7 76033623 - REC8 chr14 24644751 + Exonic hg19 OV TCGA-13-0890 2 Out-of-Frame Inter-chr q12 9774 ChimerSeq FusionScan TCGA_RNA-Seq SCAF4-RAB10 SCAF4 chr21 33057361 - RAB10 chr2 26321530 + Exonic hg19 OV TCGA-13-0890 2 In-Frame Inter-chr q22.11 p23.3 9775 ChimerSeq FusionScan TCGA_RNA-Seq MOCOS-RPRD1A MOCOS chr18 33837036 + RPRD1A chr18 33573263 - Exonic hg19 OV TCGA-13-0890 2 Out-of-Frame Intra-chr q12.2 q12.2 9776 ChimerSeq FusionScan TCGA_RNA-Seq PTBP1-COL1A2 PTBP1 chr19 804208 + COL1A2 chr7 94047035 + Exonic hg19 OV TCGA-13-0890 2 In-Frame Inter-chr p13.3 q21.3 9777 ChimerSeq FusionScan TCGA_RNA-Seq EIF2C2-TRAPPC9 EIF2C2 chr8 141595217 - TRAPPC9 chr8 141301177 - Exonic hg19 OV TCGA-29-1705 6 Out-of-Frame Intra-chr q24.3 9778 ChimerSeq FusionScan TCGA_RNA-Seq COPZ1-KLHL35 COPZ1 chr12 54718965 + KLHL35 chr11 75139671 - Exonic hg19 OV TCGA-29-1705 2 Out-of-Frame Inter-chr q13.13 q13.4 9779 ChimerSeq FusionScan TCGA_RNA-Seq PARG-SGMS1 PARG chr10 51370853 - SGMS1 chr10 52087082 - Exonic hg19 OV TCGA-29-1705 2 Out-of-Frame Intra-chr q11.23 q11.23 Tumor suppressor gene 9780 ChimerSeq FusionScan TCGA_RNA-Seq EIF2C2-TRAPPC9 EIF2C2 chr8 141645583 - TRAPPC9 chr8 141301177 - Exonic hg19 OV TCGA-29-1705 2 In-Frame Intra-chr q24.3 9781 ChimerSeq FusionScan TCGA_RNA-Seq DCUN1D2-TMCO3 DCUN1D2 chr13 114144981 - TMCO3 chr13 114193671 + Exonic hg19 OV TCGA-29-1705 2 In-Frame Intra-chr q34 q34 Seq+ 9782 ChimerSeq FusionScan TCGA_RNA-Seq CHD7-WHSC1L1 CHD7 chr8 61591641 + WHSC1L1 chr8 38162963 - Exonic hg19 OV TCGA-24-1604 10 5'UTR-CDS Intra-chr q12.2 p11.23 Tumor suppressor gene Seq+ 9783 ChimerSeq FusionScan TCGA_RNA-Seq DERL1-C6orf132 DERL1 chr8 124054209 - C6orf132 chr6 42078029 - Exonic hg19 OV TCGA-24-1604 3 In-Frame Inter-chr q24.13 p21.1 Seq+ 9784 ChimerSeq FusionScan TCGA_RNA-Seq ANK1-FUT10 ANK1 chr8 41553880 - FUT10 chr8 33247316 - Exonic hg19 OV TCGA-24-1604 3 Out-of-Frame Intra-chr p11.21 p12 Seq+ 9785 ChimerSeq FusionScan TCGA_RNA-Seq CADM1-GNAS CADM1 chr11 115374988 - GNAS chr20 57470666 + Exonic hg19 OV TCGA-25-1316 2 In-Frame Inter-chr q23.3 Tumor suppressor gene q13.32 Oncogene 9786 ChimerSeq FusionScan TCGA_RNA-Seq LYST-COG2 LYST chr1 236030142 - COG2 chr1 230795209 + Exonic hg19 OV TCGA-25-1316 2 5'UTR-CDS Intra-chr q42.3 q42.2 9787 ChimerSeq FusionScan TCGA_RNA-Seq GAPDH-SNRPD2 GAPDH chr12 6643735 + SNRPD2 chr19 46191824 - Exonic hg19 OV TCGA-25-1316 2 5'UTR-5'UTR Inter-chr p13.31 q13.32 9788 ChimerSeq FusionScan TCGA_RNA-Seq AVPR2-HUWE1 AVPR2 chrX 153168346 + HUWE1 chrX 53565415 - Exonic hg19 OV TCGA-25-1316 2 5'UTR-CDS Intra-chr q28 p11.22 9789 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC7-PRSS1 ZCCHC7 chr9 37302228 + PRSS1 chr7 142459624 + Exonic hg19 OV TCGA-10-0934 8 Out-of-Frame Inter-chr p13.2 9790 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC7-PRSS3 ZCCHC7 chr9 37302228 + PRSS3 chr9 33797826 + Exonic hg19 OV TCGA-10-0934 8 Out-of-Frame Intra-chr p13.2 p13.3 Seq+ 9791 ChimerSeq FusionScan TCGA_RNA-Seq TXNDC11-GSPT1 TXNDC11 chr16 11836332 - GSPT1 chr16 11980788 - Exonic hg19 OV TCGA-10-0934 6 Out-of-Frame Intra-chr p13.13 p13.13 Seq+ 9792 ChimerSeq FusionScan TCGA_RNA-Seq RHPN2-CEP89 RHPN2 chr19 33535154 - CEP89 chr19 33450964 - Exonic hg19 OV TCGA-10-0934 5 In-Frame Intra-chr q13.11 q13.11 9793 ChimerSeq FusionScan TCGA_RNA-Seq LPCAT3-PTPN6 LPCAT3 chr12 7125577 - PTPN6 chr12 7070288 + Exonic hg19 OV TCGA-10-0934 4 CDS-3'UTR Intra-chr p13.31 p13.31 Tumor suppressor gene 9794 ChimerSeq FusionScan TCGA_RNA-Seq MECOM-LMAN2L MECOM chr3 169381123 - LMAN2L chr2 97400263 - Exonic hg19 OV TCGA-10-0934 4 Out-of-Frame Inter-chr q26.2 Transcription factor q11.2 Seq+ 9795 ChimerSeq FusionScan TCGA_RNA-Seq RAB11FIP5-UBE2E3 RAB11FIP5 chr2 73303120 - UBE2E3 chr2 181925391 + Exonic hg19 OV TCGA-10-0934 4 In-Frame Intra-chr p13.2 q31.3 Seq+ 9796 ChimerSeq FusionScan TCGA_RNA-Seq RPL32-WNT7A RPL32 chr3 12880847 - WNT7A chr3 13896300 - Exonic hg19 OV TCGA-10-0934 4 Out-of-Frame Intra-chr p25.2 p25.1 Tumor suppressor gene Seq+ 9797 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-COQ6 PVT1 chr8 128806980 + COQ6 chr14 74420137 + Exonic hg19 OV TCGA-10-0934 3 5'UTR-CDS Inter-chr q24.21 q24.3 Seq+ 9798 ChimerSeq FusionScan TCGA_RNA-Seq RPS19-THOC7 RPS19 chr19 42365281 + THOC7 chr3 63825449 - Exonic hg19 OV TCGA-10-0934 2 In-Frame Inter-chr q13.2 p14.1 9799 ChimerSeq FusionScan TCGA_RNA-Seq METTL24-SLC22A16 METTL24 chr6 110643976 - SLC22A16 chr6 110746288 - Exonic hg19 OV TCGA-10-0934 2 In-Frame Intra-chr q21 q21 Seq+ 9800 ChimerSeq FusionScan TCGA_RNA-Seq KANSL3-LMAN2L KANSL3 chr2 97297048 - LMAN2L chr2 97377762 - Exonic hg19 OV TCGA-10-0934 2 Out-of-Frame Intra-chr q11.2 q11.2 Seq+ 9801 ChimerSeq FusionScan TCGA_RNA-Seq EPS8-PLEKHA5 EPS8 chr12 15942094 - PLEKHA5 chr12 19489448 + Exonic hg19 OV TCGA-61-2102 18 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 9802 ChimerSeq FusionScan TCGA_RNA-Seq VPS41-VOPP1 VPS41 chr7 38902144 - VOPP1 chr7 55565383 - Exonic hg19 OV TCGA-61-2102 5 Out-of-Frame Intra-chr p14.1 p11.2 Seq+ 9803 ChimerSeq FusionScan TCGA_RNA-Seq MYO9B-ATP13A1 MYO9B chr19 17213367 + ATP13A1 chr19 19758337 - Exonic hg19 OV TCGA-61-2102 4 In-Frame Intra-chr p13.11 p13.11 Seq+ 9804 ChimerSeq FusionScan TCGA_RNA-Seq MYO9B-ATP13A1 MYO9B chr19 17213367 + ATP13A1 chr19 19758568 - Exonic hg19 OV TCGA-61-2102 3 Out-of-Frame Intra-chr p13.11 p13.11 Seq+ 9805 ChimerSeq FusionScan TCGA_RNA-Seq FNDC3B-CYB5A FNDC3B chr3 171944737 + CYB5A chr18 71923010 - Exonic hg19 OV TCGA-61-2102 2 In-Frame Inter-chr q26.31 q22.3 Tumor suppressor gene 9806 ChimerSeq FusionScan TCGA_RNA-Seq EPS8-PLEKHA5 EPS8 chr12 15942094 - PLEKHA5 chr12 19496256 + Exonic hg19 OV TCGA-61-2102 2 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 9807 ChimerSeq FusionScan TCGA_RNA-Seq FBRSL1-GALNT9 FBRSL1 chr12 133067447 + GALNT9 chr12 132863016 - Exonic hg19 OV TCGA-61-2102 2 Out-of-Frame Intra-chr q24.33 q24.33 Seq+ 9808 ChimerSeq FusionScan TCGA_RNA-Seq MED24-KRT40 MED24 chr17 38209550 - KRT40 chr17 39135276 - Exonic hg19 OV TCGA-29-2428 19 In-Frame Intra-chr q21.1 Seq+ 9809 ChimerSeq FusionScan TCGA_RNA-Seq MUC16-RARA MUC16 chr19 9045563 - RARA chr17 38487108 + Exonic hg19 OV TCGA-29-2428 5 CDS-5'UTR Inter-chr p13.2 q21.2 Oncogene Transcription factor Seq+ 9810 ChimerSeq FusionScan TCGA_RNA-Seq IDH2-CAPNS1 IDH2 chr15 90631590 - CAPNS1 chr19 36640479 + Exonic hg19 OV TCGA-29-2428 2 Out-of-Frame Inter-chr q26.1 Oncogene q13.12 9811 ChimerSeq FusionScan TCGA_RNA-Seq ATP11A-NUCB2 ATP11A chr13 113344769 + NUCB2 chr11 17351673 + Exonic hg19 OV TCGA-29-2428 2 In-Frame Inter-chr q34 p15.1 9812 ChimerSeq FusionScan TCGA_RNA-Seq ASH1L-RAB1A ASH1L chr1 155531943 - RAB1A chr2 65315824 - Exonic hg19 OV TCGA-29-2428 2 5'UTR-CDS Inter-chr q22 Transcription factor p14 9813 ChimerSeq FusionScan TCGA_RNA-Seq GCN1L1-RPLP0 GCN1L1 chr12 120611456 - RPLP0 chr12 120635265 - Exonic hg19 OV TCGA-24-1418 17 Out-of-Frame Intra-chr q24.23 Seq+ 9814 ChimerSeq FusionScan TCGA_RNA-Seq TMEM30A-RBPJ TMEM30A chr6 75974946 - RBPJ chr4 26417096 + Exonic hg19 OV TCGA-24-1418 2 Out-of-Frame Inter-chr q14.1 p15.2 Transcription factor 9815 ChimerSeq FusionScan TCGA_RNA-Seq ZNRF3-MYOM3 ZNRF3 chr22 29280054 + MYOM3 chr1 24407946 - Exonic hg19 OV TCGA-24-1418 2 In-Frame Inter-chr q12.1 p36.11 9816 ChimerSeq FusionScan TCGA_RNA-Seq OTUD5-PCSK1N OTUD5 chrX 48791736 - PCSK1N chrX 48690751 - Exonic hg19 OV TCGA-29-1761 8 In-Frame Intra-chr p11.23 p11.23 Seq+ 9817 ChimerSeq FusionScan TCGA_RNA-Seq SGPL1-COL13A1 SGPL1 chr10 72617447 + COL13A1 chr10 71655305 + Exonic hg19 OV TCGA-29-1761 4 In-Frame Intra-chr q22.1 q22.1 Seq+ 9818 ChimerSeq FusionScan TCGA_RNA-Seq CNOT3-TFPT CNOT3 chr19 54641709 + TFPT chr19 54613504 - Exonic hg19 OV TCGA-29-1761 3 5'UTR-CDS Intra-chr Tumor suppressor gene 9819 ChimerSeq FusionScan TCGA_RNA-Seq AP1M2-TMED1 AP1M2 chr19 10697865 - TMED1 chr19 10943889 - Exonic hg19 OV TCGA-29-1761 3 In-Frame Intra-chr p13.2 p13.2 Seq+ 9820 ChimerSeq FusionScan TCGA_RNA-Seq SGPL1-COL13A1 SGPL1 chr10 72617447 + COL13A1 chr10 71662503 + Exonic hg19 OV TCGA-29-1761 3 In-Frame Intra-chr q22.1 q22.1 Seq+ 9821 ChimerSeq FusionScan TCGA_RNA-Seq CLPX-SPG21 CLPX chr15 65477412 - SPG21 chr15 65275931 - Exonic hg19 OV TCGA-29-1761 2 CDS-5'UTR Intra-chr q22.31 q22.31 9822 ChimerSeq FusionScan TCGA_RNA-Seq B4GALT1-ACER2 B4GALT1 chr9 33166755 - ACER2 chr9 19450447 + Exonic hg19 OV TCGA-29-1761 2 Out-of-Frame Intra-chr p21.1 p22.1 9823 ChimerSeq FusionScan TCGA_RNA-Seq RBM10-PTCD3 RBM10 chrX 47006897 + PTCD3 chr2 86363643 + Exonic hg19 OV TCGA-29-1761 2 In-Frame Inter-chr p11.3 p11.2 9824 ChimerSeq FusionScan TCGA_RNA-Seq RASSF8-PTEN RASSF8 chr12 26148063 + PTEN chr10 89711874 + Exonic hg19 OV TCGA-29-1761 2 5'UTR-CDS Inter-chr p12.1 Tumor suppressor gene q23.31 Oncogene Tumor suppressor gene 9825 ChimerSeq FusionScan TCGA_RNA-Seq CERS4-PRKCSH CERS4 chr19 8275746 + PRKCSH chr19 11561460 + Exonic hg19 OV TCGA-29-1761 2 5'UTR-3'UTR Intra-chr p13.2 p13.2 9826 ChimerSeq FusionScan TCGA_RNA-Seq PCBP2-PFDN5 PCBP2 chr12 53856351 + PFDN5 chr12 53691633 + Exonic hg19 OV TCGA-25-1631 15 In-Frame Intra-chr q13.13 q13.13 Seq+ 9827 ChimerSeq FusionScan TCGA_RNA-Seq HDAC11-FBLN2 HDAC11 chr3 13525064 + FBLN2 chr3 13611814 + Exonic hg19 OV TCGA-25-1631 2 CDS-5'UTR Intra-chr p25.1 p25.1 9828 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-C14orf166 RCC1 chr1 28834672 + C14orf166 chr14 52465211 + Exonic hg19 OV TCGA-25-1631 2 5'UTR-CDS Inter-chr p35.3 q22.1 9829 ChimerSeq FusionScan TCGA_RNA-Seq XPO7-PDLIM2 XPO7 chr8 21777299 + PDLIM2 chr8 22447108 + Exonic hg19 OV TCGA-25-1631 2 Out-of-Frame Intra-chr p21.3 p21.3 9830 ChimerSeq FusionScan TCGA_RNA-Seq FLOT2-PHF12 FLOT2 chr17 27224543 - PHF12 chr17 27235899 - Exonic hg19 OV TCGA-25-1631 2 In-Frame Intra-chr q11.2 q11.2 Seq+ 9831 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R2A-BNIP3L PPP2R2A chr8 26151256 + BNIP3L chr8 26248758 + Exonic hg19 OV TCGA-13-1507 3 In-Frame Intra-chr p21.2 p21.2 Tumor suppressor gene Seq+ 9832 ChimerSeq FusionScan TCGA_RNA-Seq SF1-TC2N SF1 chr11 64543969 - TC2N chr14 92249554 - Exonic hg19 OV TCGA-13-1507 2 Out-of-Frame Inter-chr q13.1 9833 ChimerSeq FusionScan TCGA_RNA-Seq RNF144A-HDLBP RNF144A chr2 7057753 + HDLBP chr2 242207956 - Exonic hg19 OV TCGA-13-1507 2 5'UTR-5'UTR Intra-chr p25.1 Tumor suppressor gene q37.3 Seq+ 9834 ChimerSeq FusionScan TCGA_RNA-Seq RAD21-EIF3H RAD21 chr8 117874079 - EIF3H chr8 117738411 - Exonic hg19 OV TCGA-13-1507 2 Out-of-Frame Intra-chr q24.11 q24.11 Seq+ 9835 ChimerSeq FusionScan TCGA_RNA-Seq RAD21-EIF3H RAD21 chr8 117875368 - EIF3H chr8 117671219 - Exonic hg19 OV TCGA-13-1507 2 In-Frame Intra-chr q24.11 q24.11 Seq+ 9836 ChimerSeq FusionScan TCGA_RNA-Seq SEL1L-MIOS SEL1L chr14 82000018 - MIOS chr7 7625266 + Exonic hg19 OV TCGA-59-A5PD 8 In-Frame Inter-chr q31.1 p21.3 Seq+ 9837 ChimerSeq FusionScan TCGA_RNA-Seq TLK1-ADK TLK1 chr2 171939290 - ADK chr10 76429940 + Exonic hg19 OV TCGA-59-A5PD 7 Out-of-Frame Inter-chr q31.1 Other:TLK q22.2 Seq+ 9838 ChimerSeq FusionScan TCGA_RNA-Seq RHOC-TDRKH RHOC chr1 113249699 - TDRKH chr1 151751718 - Exonic hg19 OV TCGA-59-A5PD 6 5'UTR-CDS Intra-chr p13.2 q21.3 Seq+ 9839 ChimerSeq FusionScan TCGA_RNA-Seq KIF3C-ADCY3 KIF3C chr2 26203241 - ADCY3 chr2 25095588 - Exonic hg19 OV TCGA-59-A5PD 4 In-Frame Intra-chr p23.3 p23.3 Seq+ 9840 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D1-NMU TBC1D1 chr4 38055959 + NMU chr4 56466742 - Exonic hg19 OV TCGA-59-A5PD 4 Out-of-Frame Intra-chr p14 q12 Seq+ 9841 ChimerSeq FusionScan TCGA_RNA-Seq DHX57-HS2ST1 DHX57 chr2 39081195 - HS2ST1 chr1 87558213 + Exonic hg19 OV TCGA-59-A5PD 2 In-Frame Inter-chr p22.1 p22.3 Seq+ 9842 ChimerSeq FusionScan TCGA_RNA-Seq CBL-ATP5L CBL chr11 119077322 + ATP5L chr11 118277651 + Exonic hg19 OV TCGA-59-A5PD 2 Out-of-Frame Intra-chr q23.3 Oncogene Tumor suppressor gene q23.3 Seq+ 9843 ChimerSeq FusionScan TCGA_RNA-Seq IFT57-MLXIP IFT57 chr3 107886639 - MLXIP chr12 122613683 + Exonic hg19 OV TCGA-59-A5PD 2 In-Frame Inter-chr q13.13 Transcription factor 9844 ChimerSeq FusionScan TCGA_RNA-Seq FANCA-PRKD2 FANCA chr16 89880927 - PRKD2 chr19 47214295 - Exonic hg19 OV TCGA-59-A5PD 2 In-Frame Inter-chr q24.3 Oncogene q13.32 9845 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC17-SERINC2 ZCCHC17 chr1 31821821 + SERINC2 chr1 31883231 + Exonic hg19 OV TCGA-59-A5PD 2 In-Frame Intra-chr p35.2 p35.2 9846 ChimerSeq FusionScan TCGA_RNA-Seq RCOR1-TECPR2 RCOR1 chr14 103059662 + TECPR2 chr14 102931477 + Exonic hg19 OV TCGA-59-A5PD 2 In-Frame Intra-chr q32.31 q32.31 Seq+ 9847 ChimerSeq FusionScan TCGA_RNA-Seq FAM171A1-DCLRE1C FAM171A1 chr10 15412954 - DCLRE1C chr10 14981868 - Exonic hg19 OV TCGA-24-1430 6 Out-of-Frame Intra-chr p13 p13 9848 ChimerSeq FusionScan TCGA_RNA-Seq PVRIG-PILRB PVRIG chr7 99818443 + PILRB chr7 99952765 + Exonic hg19 OV TCGA-24-1430 5 CDS-5'UTR Intra-chr q22.1 q22.1 9849 ChimerSeq FusionScan TCGA_RNA-Seq ZNF292-SLIRP ZNF292 chr6 87865477 + SLIRP chr14 78177180 + Exonic hg19 OV TCGA-24-1430 4 Out-of-Frame Inter-chr q14.3 Tumor suppressor gene Transcription factor q24.3 Seq+ 9850 ChimerSeq FusionScan TCGA_RNA-Seq OXR1-CLEC18A OXR1 chr8 107531367 + CLEC18A chr16 69992844 + Exonic hg19 OV TCGA-24-1430 4 Out-of-Frame Inter-chr q23.1 q22.1 9851 ChimerSeq FusionScan TCGA_RNA-Seq AGAP1-ZNF706 AGAP1 chr2 236403493 + ZNF706 chr8 102214675 - Exonic hg19 OV TCGA-24-1430 2 CDS-5'UTR Inter-chr q37.2 q22.3 Transcription factor 9852 ChimerSeq FusionScan TCGA_RNA-Seq PROSC-CHMP1A PROSC chr8 37623873 + CHMP1A chr16 89713739 - Exonic hg19 OV TCGA-24-1430 2 In-Frame Inter-chr q24.3 Seq+ 9853 ChimerSeq FusionScan TCGA_RNA-Seq OXR1-CLEC18C OXR1 chr8 107531367 + CLEC18C chr16 70211143 + Exonic hg19 OV TCGA-24-1430 2 Out-of-Frame Inter-chr q23.1 q22.1 Seq+ 9854 ChimerSeq FusionScan TCGA_RNA-Seq FOXJ3-TAF11 FOXJ3 chr1 42730785 - TAF11 chr6 34850857 - Exonic hg19 OV TCGA-24-1430 2 In-Frame Inter-chr p34.2 Transcription factor p21.31 9855 ChimerSeq FusionScan TCGA_RNA-Seq SCD5-PLAC8 SCD5 chr4 83719458 - PLAC8 chr4 84026173 - Exonic hg19 OV TCGA-24-1555 6 In-Frame Intra-chr q21.22 q21.22 Seq+ 9856 ChimerSeq FusionScan TCGA_RNA-Seq SRGAP3-OXTR SRGAP3 chr3 9290568 - OXTR chr3 8810277 - Exonic hg19 OV TCGA-24-1555 6 CDS-5'UTR Intra-chr p25.3 Tumor suppressor gene p25.3 Seq+ 9857 ChimerSeq FusionScan TCGA_RNA-Seq COL4A1-SLIT3 COL4A1 chr13 110959290 - SLIT3 chr5 168150009 - Exonic hg19 OV TCGA-24-1555 3 Out-of-Frame Inter-chr q34 q35.1 9858 ChimerSeq FusionScan TCGA_RNA-Seq ZNF738-CHMP1A ZNF738 chr19 21558766 + CHMP1A chr16 89713739 - Exonic hg19 OV TCGA-24-1555 2 5'UTR-CDS Inter-chr p12 q24.3 Seq+ 9859 ChimerSeq FusionScan TCGA_RNA-Seq EDF1-ZC3H3 EDF1 chr9 139757357 - ZC3H3 chr8 144550829 - Exonic hg19 OV TCGA-24-1555 2 In-Frame Inter-chr q34.3 9860 ChimerSeq FusionScan TCGA_RNA-Seq ESCO1-FAM65C ESCO1 chr18 19180583 - FAM65C chr20 49247393 - Exonic hg19 OV TCGA-24-1555 2 5'UTR-5'UTR Inter-chr q11.2 Seq+ 9861 ChimerSeq FusionScan TCGA_RNA-Seq CCDC124-COL28A1 CCDC124 chr19 18047388 + COL28A1 chr7 7421243 - Exonic hg19 OV TCGA-61-1724 7 In-Frame Inter-chr p13.11 p21.3 Seq+ 9862 ChimerSeq FusionScan TCGA_RNA-Seq DOCK1-NPS DOCK1 chr10 128780237 + NPS chr10 129350723 + Exonic hg19 OV TCGA-61-1724 5 Out-of-Frame Intra-chr q26.2 q26.2 Seq+ 9863 ChimerSeq FusionScan TCGA_RNA-Seq NFE2L2-PDE11A NFE2L2 chr2 178128130 - PDE11A chr2 178705110 - Exonic hg19 OV TCGA-61-1724 4 5'UTR-CDS Intra-chr q31.2 Oncogene Transcription factor q31.2 Seq+ 9864 ChimerSeq FusionScan TCGA_RNA-Seq NFE2L2-PDE11A NFE2L2 chr2 178129259 - PDE11A chr2 178705110 - Exonic hg19 OV TCGA-61-1724 4 Out-of-Frame Intra-chr q31.2 Oncogene Transcription factor q31.2 Seq+ 9865 ChimerSeq FusionScan TCGA_RNA-Seq MYO9A-PARP6 MYO9A chr15 72196269 - PARP6 chr15 72535040 - Exonic hg19 OV TCGA-61-1724 3 Out-of-Frame Intra-chr q23 q23 Seq+ 9866 ChimerSeq FusionScan TCGA_RNA-Seq RALGPS1-GAPVD1 RALGPS1 chr9 129831635 + GAPVD1 chr9 128109097 + Exonic hg19 OV TCGA-61-1724 3 In-Frame Intra-chr q33.3 q33.3 Seq+ 9867 ChimerSeq FusionScan TCGA_RNA-Seq SACM1L-DOCK3 SACM1L chr3 45773643 + DOCK3 chr3 50879105 + Exonic hg19 OV TCGA-61-1724 3 Out-of-Frame Intra-chr p21.31 p21.2 9868 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT6 NDUFA11 chr19 5896463 - FUT6 chr19 5832590 - Exonic hg19 OV TCGA-61-1724 3 CDS-5'UTR Intra-chr p13.3 p13.3 9869 ChimerSeq FusionScan TCGA_RNA-Seq PTRH2-REPS1 PTRH2 chr17 57784731 - REPS1 chr6 139269050 - Exonic hg19 OV TCGA-61-1724 2 5'UTR-CDS Inter-chr q23.1 q24.1 9870 ChimerSeq FusionScan TCGA_RNA-Seq TONSL-NDUFV1 TONSL chr8 145660193 - NDUFV1 chr11 67375866 + Exonic hg19 OV TCGA-61-1724 2 Out-of-Frame Inter-chr q24.3 q13.2 9871 ChimerSeq FusionScan TCGA_RNA-Seq ZC3H3-ATF6B ZC3H3 chr8 144623545 - ATF6B chr6 32087734 - Exonic hg19 OV TCGA-61-1724 2 CDS-5'UTR Inter-chr Transcription factor 9872 ChimerSeq FusionScan TCGA_RNA-Seq UBC-GAPVD1 UBC chr12 125399132 - GAPVD1 chr9 128092356 + Exonic hg19 OV TCGA-61-1724 2 5'UTR-CDS Inter-chr q24.31 q33.3 9873 ChimerSeq FusionScan TCGA_RNA-Seq MIR17HG-ZFYVE20 MIR17HG chr13 92002480 + ZFYVE20 chr3 15139781 - Exonic hg19 OV TCGA-61-1724 2 5'UTR-5'UTR Inter-chr q31.3 9874 ChimerSeq FusionScan TCGA_RNA-Seq ABCA1-PRR5L ABCA1 chr9 107620802 - PRR5L chr11 36453402 + Exonic hg19 OV TCGA-61-1724 2 In-Frame Inter-chr q31.1 p13 9875 ChimerSeq FusionScan TCGA_RNA-Seq VPS16-DGKA VPS16 chr20 2846141 + DGKA chr12 56333865 + Exonic hg19 OV TCGA-61-1724 2 Out-of-Frame Inter-chr p13 q13.2 9876 ChimerSeq FusionScan TCGA_RNA-Seq ITGA7-MIP ITGA7 chr12 56086627 - MIP chr12 56847539 - Exonic hg19 OV TCGA-61-1724 2 In-Frame Intra-chr q13.2 Tumor suppressor gene q13.3 Seq+ 9877 ChimerSeq FusionScan TCGA_RNA-Seq WASF2-SLC9A1 WASF2 chr1 27816496 - SLC9A1 chr1 27429803 - Exonic hg19 OV TCGA-24-1545 10 5'UTR-CDS Intra-chr p36.11 p36.11 Seq+ 9878 ChimerSeq FusionScan TCGA_RNA-Seq RAB11FIP3-SOLH RAB11FIP3 chr16 476720 + SOLH chr16 596816 + Exonic hg19 OV TCGA-24-1545 6 CDS-5'UTR Intra-chr 9879 ChimerSeq FusionScan TCGA_RNA-Seq TMEM67-UBE2K TMEM67 chr8 94770804 + UBE2K chr4 39779979 + Exonic hg19 OV TCGA-24-1545 2 Out-of-Frame Inter-chr q22.1 p14 9880 ChimerSeq FusionScan TCGA_RNA-Seq RANGAP1-PMM1 RANGAP1 chr22 41664100 - PMM1 chr22 41974885 - Exonic hg19 OV TCGA-24-2280 9 In-Frame Intra-chr q13.2 q13.2 Seq+ 9881 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-CTNNB1 TBL1XR1 chr3 176914908 - CTNNB1 chr3 41274831 + Exonic hg19 OV TCGA-24-2280 6 5'UTR-CDS Intra-chr q26.32 p22.1 Oncogene Seq+ 9882 ChimerSeq FusionScan TCGA_RNA-Seq CLSTN1-SERTAD1 CLSTN1 chr1 9883700 - SERTAD1 chr19 40929453 - Exonic hg19 OV TCGA-24-2280 5 CDS-5'UTR Inter-chr p36.22 q13.2 Seq+ 9883 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57889030 + Exonic hg19 OV TCGA-24-2280 4 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 9884 ChimerSeq FusionScan TCGA_RNA-Seq TRIM52-ABL1 TRIM52 chr5 180687001 - ABL1 chr9 133759355 + Exonic hg19 OV TCGA-24-2280 2 Out-of-Frame Inter-chr q35.3 q34.12 TK:Abl Oncogene 9885 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC10-TCERG1 DNAJC10 chr2 183584896 + TCERG1 chr5 145863102 + Exonic hg19 OV TCGA-24-2280 2 Out-of-Frame Inter-chr q32.1 q32 9886 ChimerSeq FusionScan TCGA_RNA-Seq SCYL1-MICAL2 SCYL1 chr11 65294588 + MICAL2 chr11 12278331 + Exonic hg19 OV TCGA-24-2280 2 In-Frame Intra-chr q13.1 Other:SCY1 Tumor suppressor gene p15.3 9887 ChimerSeq FusionScan TCGA_RNA-Seq GGT7-SLA2 GGT7 chr20 33460449 - SLA2 chr20 35243777 - Exonic hg19 OV TCGA-24-2280 2 In-Frame Intra-chr q11.22 q11.23 Seq+ 9888 ChimerSeq FusionScan TCGA_RNA-Seq SH3PXD2A-RB1 SH3PXD2A chr10 105371337 - RB1 chr13 49039133 + Exonic hg19 OV TCGA-24-1469 12 In-Frame Inter-chr q24.33 q14.2 Oncogene Tumor suppressor gene Seq+ 9889 ChimerSeq FusionScan TCGA_RNA-Seq MOB3B-CAAP1 MOB3B chr9 27529552 - CAAP1 chr9 26861137 - Exonic hg19 OV TCGA-24-1469 7 5'UTR-CDS Intra-chr p21.2 p21.2 Seq+ 9890 ChimerSeq FusionScan TCGA_RNA-Seq MCL1-CTSS MCL1 chr1 150551318 - CTSS chr1 150720355 - Exonic hg19 OV TCGA-24-1469 7 In-Frame Intra-chr q21.2 Oncogene q21.3 Seq+ 9891 ChimerSeq FusionScan TCGA_RNA-Seq ANTXR1-APLF ANTXR1 chr2 69298919 + APLF chr2 68804951 + Exonic hg19 OV TCGA-24-1469 5 In-Frame Intra-chr p13.3 p13.3 Seq+ 9892 ChimerSeq FusionScan TCGA_RNA-Seq MECOM-LRRC31 MECOM chr3 169381123 - LRRC31 chr3 169587660 - Exonic hg19 OV TCGA-24-1469 4 5'UTR-5'UTR Intra-chr q26.2 Transcription factor q26.2 Seq+ 9893 ChimerSeq FusionScan TCGA_RNA-Seq INTS4-LGALS3BP INTS4 chr11 77705635 - LGALS3BP chr17 76968786 - Exonic hg19 OV TCGA-24-1469 3 Out-of-Frame Inter-chr q14.1 q25.3 Seq+ 9894 ChimerSeq FusionScan TCGA_RNA-Seq HMGCS1-PAIP1 HMGCS1 chr5 43307867 - PAIP1 chr5 43527571 - Exonic hg19 OV TCGA-24-1469 3 5'UTR-CDS Intra-chr p12 p12 Seq+ 9895 ChimerSeq FusionScan TCGA_RNA-Seq FCHSD2-FAM168A FCHSD2 chr11 72851075 - FAM168A chr11 73179537 - Exonic hg19 OV TCGA-24-1469 3 CDS-5'UTR Intra-chr q13.4 q13.4 Seq+ 9896 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2IP-SREK1 ERBB2IP chr5 65290692 + SREK1 chr5 65455046 + Exonic hg19 OV TCGA-24-1469 2 In-Frame Intra-chr q12.3 Seq+ 9897 ChimerSeq FusionScan TCGA_RNA-Seq GIGYF2-DIS3L2 GIGYF2 chr2 233562102 + DIS3L2 chr2 233194522 + Exonic hg19 OV TCGA-24-1469 2 5'UTR-CDS Intra-chr q37.1 q37.1 Seq+ 9898 ChimerSeq FusionScan TCGA_RNA-Seq HMGCS1-PAIP1 HMGCS1 chr5 43313457 - PAIP1 chr5 43527571 - Exonic hg19 OV TCGA-24-1469 2 5'UTR-CDS Intra-chr p12 p12 Seq+ 9899 ChimerSeq FusionScan TCGA_RNA-Seq TRIM28-CSMD1 TRIM28 chr19 59060607 + CSMD1 chr8 3351248 - Exonic hg19 OV TCGA-24-1469 2 In-Frame Inter-chr q13.43 p23.2 Tumor suppressor gene 9900 ChimerSeq FusionScan TCGA_RNA-Seq MACF1-BMP8A MACF1 chr1 39854330 + BMP8A chr1 39987047 + Exonic hg19 OV TCGA-24-1469 2 Out-of-Frame Intra-chr p34.3 p34.3 Seq+ 9901 ChimerSeq FusionScan TCGA_RNA-Seq ZNF341-CBFA2T2 ZNF341 chr20 32371670 + CBFA2T2 chr20 32194761 + Exonic hg19 OV TCGA-24-1469 2 In-Frame Intra-chr q11.22 Transcription factor q11.21 Seq+ 9902 ChimerSeq FusionScan TCGA_RNA-Seq RPS6-UGGT1 RPS6 chr9 19379484 - UGGT1 chr2 128918711 + Exonic hg19 OV TCGA-24-1469 2 3'UTR-CDS Inter-chr p22.1 q14.3 9903 ChimerSeq FusionScan TCGA_RNA-Seq HEATR7A-SPATC1 HEATR7A chr8 145202979 + SPATC1 chr8 145101527 + Exonic hg19 OV TCGA-13-0887 10 5'UTR-CDS Intra-chr q24.3 9904 ChimerSeq FusionScan TCGA_RNA-Seq SAFB-HSD11B1L SAFB chr19 5626500 + HSD11B1L chr19 5684829 + Exonic hg19 OV TCGA-13-0887 5 5'UTR-5'UTR Intra-chr p13.3 Tumor suppressor gene Transcription factor p13.3 9905 ChimerSeq FusionScan TCGA_RNA-Seq NFIX-CALR NFIX chr19 13136366 + CALR chr19 13049947 + Exonic hg19 OV TCGA-13-0887 3 In-Frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 9906 ChimerSeq FusionScan TCGA_RNA-Seq RPL37-MPHOSPH9 RPL37 chr5 40834282 - MPHOSPH9 chr12 123641455 - Exonic hg19 OV TCGA-13-0887 2 Out-of-Frame Inter-chr p13.1 q24.31 9907 ChimerSeq FusionScan TCGA_RNA-Seq C3orf52-AIFM1 C3orf52 chr3 111812336 + AIFM1 chrX 129265774 - Exonic hg19 OV TCGA-13-0887 2 Out-of-Frame Inter-chr q13.2 q26.1 9908 ChimerSeq FusionScan TCGA_RNA-Seq CPNE1-RALY CPNE1 chr20 34252681 - RALY chr20 32619327 + Exonic hg19 OV TCGA-13-0887 2 5'UTR-5'UTR Intra-chr q11.22 q11.22 9909 ChimerSeq FusionScan TCGA_RNA-Seq DGKG-CRYGS DGKG chr3 186079734 - CRYGS chr3 186257386 - Exonic hg19 OV TCGA-13-0887 2 5'UTR-CDS Intra-chr q27.3 q27.3 Seq+ 9910 ChimerSeq FusionScan TCGA_RNA-Seq NFIC-CELF5 NFIC chr19 3382241 + CELF5 chr19 3290269 + Exonic hg19 OV TCGA-13-0887 2 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 9911 ChimerSeq FusionScan TCGA_RNA-Seq C10orf47-PRPF3 C10orf47 chr10 11894214 + PRPF3 chr1 150325308 + Exonic hg19 OV TCGA-13-0887 2 In-Frame Inter-chr q21.2 9912 ChimerSeq FusionScan TCGA_RNA-Seq DYRK1A-PHF6 DYRK1A chr21 38739930 + PHF6 chrX 133511601 + Exonic hg19 OV TCGA-61-2101 5 5'UTR-5'UTR Inter-chr q22.13 CMGC:DYRK q26.2 Oncogene Tumor suppressor gene Seq+ 9913 ChimerSeq FusionScan TCGA_RNA-Seq LARGE-CBX7 LARGE chr22 34157357 - CBX7 chr22 39545837 - Exonic hg19 OV TCGA-61-2101 2 Out-of-Frame Intra-chr q13.1 Seq+ 9914 ChimerSeq FusionScan TCGA_RNA-Seq GUK1-NFATC4 GUK1 chr1 228333325 + NFATC4 chr14 24846843 + Exonic hg19 OV TCGA-61-2101 2 In-Frame Inter-chr q42.13 q12 Transcription factor 9915 ChimerSeq FusionScan TCGA_RNA-Seq WDR45L-CSNK1D WDR45L chr17 80601824 - CSNK1D chr17 80223672 - Exonic hg19 OV TCGA-61-2101 2 In-Frame Intra-chr q25.3 9916 ChimerSeq FusionScan TCGA_RNA-Seq FPGS-CERCAM FPGS chr9 130566979 + CERCAM chr9 131193449 + Exonic hg19 OV TCGA-61-2101 2 In-Frame Intra-chr q34.11 q34.11 9917 ChimerSeq FusionScan TCGA_RNA-Seq PSD3-DUSP14 PSD3 chr8 18793543 - DUSP14 chr17 35870778 + Exonic hg19 OV TCGA-61-2101 2 CDS-5'UTR Inter-chr p22 q12 9918 ChimerSeq FusionScan TCGA_RNA-Seq GPBP1L1-NRD1 GPBP1L1 chr1 46151247 - NRD1 chr1 52306186 - Exonic hg19 OV TCGA-61-2101 2 5'UTR-5'UTR Intra-chr p34.1 Transcription factor 9919 ChimerSeq FusionScan TCGA_RNA-Seq NUCB1-FAM83E NUCB1 chr19 49416821 + FAM83E chr19 49104626 - Exonic hg19 OV TCGA-20-0987 11 Out-of-Frame Intra-chr q13.33 q13.33 Seq+ 9920 ChimerSeq FusionScan TCGA_RNA-Seq SRPK1-CPNE5 SRPK1 chr6 35888244 - CPNE5 chr6 36733153 - Exonic hg19 OV TCGA-20-0987 5 In-Frame Intra-chr p21.31 CMGC:SRPK p21.2 Seq+ 9921 ChimerSeq FusionScan TCGA_RNA-Seq NUCB1-FAM83E NUCB1 chr19 49416453 + FAM83E chr19 49104626 - Exonic hg19 OV TCGA-20-0987 4 In-Frame Intra-chr q13.33 q13.33 Seq+ 9922 ChimerSeq FusionScan TCGA_RNA-Seq SLC39A11-CDC42EP4 SLC39A11 chr17 71027694 - CDC42EP4 chr17 71282751 - Exonic hg19 OV TCGA-20-0987 2 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 9923 ChimerSeq FusionScan TCGA_RNA-Seq CACNA2D3-TEX264 CACNA2D3 chr3 54798378 + TEX264 chr3 51718428 + Exonic hg19 OV TCGA-20-0987 2 In-Frame Intra-chr p21.1 Tumor suppressor gene p21.2 9924 ChimerSeq FusionScan TCGA_RNA-Seq VPS13B-CPQ VPS13B chr8 100733275 + CPQ chr8 98078236 + Exonic hg19 OV TCGA-20-0987 2 In-Frame Intra-chr q22.2 q22.1 Seq+ 9925 ChimerSeq FusionScan TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61665879 - ANK3 chr10 61789584 - Exonic hg19 OV TCGA-04-1517 25 CDS-3'UTR Intra-chr q21.2 q21.2 Seq+ 9926 ChimerSeq FusionScan TCGA_RNA-Seq MTMR3-UQCR10 MTMR3 chr22 30279348 + UQCR10 chr22 30165666 + Exonic hg19 OV TCGA-04-1517 22 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 9927 ChimerSeq FusionScan TCGA_RNA-Seq FUT8-FNTB FUT8 chr14 65922436 + FNTB chr14 65494170 + Exonic hg19 OV TCGA-04-1517 14 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 9928 ChimerSeq FusionScan TCGA_RNA-Seq RAB40C-RAD51B RAB40C chr16 640433 + RAD51B chr14 68758600 + Exonic hg19 OV TCGA-04-1517 9 Out-of-Frame Inter-chr p13.3 q24.1 Seq+ 9929 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF2-GON4L ARHGEF2 chr1 155924692 - GON4L chr1 155755165 - Exonic hg19 OV TCGA-04-1517 8 In-Frame Intra-chr q22 q22 Seq+ 9930 ChimerSeq FusionScan TCGA_RNA-Seq PIEZO1-GALNS PIEZO1 chr16 88815791 - GALNS chr16 88880933 - Exonic hg19 OV TCGA-04-1517 7 Out-of-Frame Intra-chr q24.3 q24.3 Seq+ 9931 ChimerSeq FusionScan TCGA_RNA-Seq WDR66-JUP WDR66 chr12 122400068 + JUP chr17 39912466 - Exonic hg19 OV TCGA-04-1517 5 Out-of-Frame Inter-chr q24.31 q21.2 Tumor suppressor gene Seq+ 9932 ChimerSeq FusionScan TCGA_RNA-Seq THRAP3-STK11 THRAP3 chr1 36690106 + STK11 chr19 1218415 + Exonic hg19 OV TCGA-04-1517 5 5'UTR-CDS Inter-chr p34.3 p13.3 Oncogene Tumor suppressor gene Seq+ 9933 ChimerSeq FusionScan TCGA_RNA-Seq MIDN-MAP7D1 MIDN chr19 1255693 + MAP7D1 chr1 36643473 + Exonic hg19 OV TCGA-04-1517 4 Out-of-Frame Inter-chr p13.3 p34.3 Seq+ 9934 ChimerSeq FusionScan TCGA_RNA-Seq SCNN1A-PKNOX1 SCNN1A chr12 6483533 - PKNOX1 chr21 44424435 + Exonic hg19 OV TCGA-04-1517 4 5'UTR-5'UTR Inter-chr p13.31 q22.3 Tumor suppressor gene Transcription factor Seq+ 9935 ChimerSeq FusionScan TCGA_RNA-Seq SOGA1-SAMHD1 SOGA1 chr20 35467619 - SAMHD1 chr20 35547922 - Exonic hg19 OV TCGA-04-1517 3 In-Frame Intra-chr q11.23 q11.23 Seq+ 9936 ChimerSeq FusionScan TCGA_RNA-Seq ARMC9-PSMD1 ARMC9 chr2 232100094 + PSMD1 chr2 232018277 + Exonic hg19 OV TCGA-04-1517 3 In-Frame Intra-chr q37.1 q37.1 Seq+ 9937 ChimerSeq FusionScan TCGA_RNA-Seq BLVRA-HECW1 BLVRA chr7 43810769 + HECW1 chr7 43400484 + Exonic hg19 OV TCGA-04-1517 3 Out-of-Frame Intra-chr p13 p14.1 9938 ChimerSeq FusionScan TCGA_RNA-Seq DHX8-ARL4D DHX8 chr17 41577471 + ARL4D chr17 41477028 + Exonic hg19 OV TCGA-04-1517 3 CDS-5'UTR Intra-chr q21.31 q21.31 Seq+ 9939 ChimerSeq FusionScan TCGA_RNA-Seq GRB2-CKB GRB2 chr17 73389631 - CKB chr14 103988842 - Exonic hg19 OV TCGA-04-1517 2 CDS-5'UTR Inter-chr q25.1 q32.33 Seq+ 9940 ChimerSeq FusionScan TCGA_RNA-Seq MAP3K6-AHDC1 MAP3K6 chr1 27690407 - AHDC1 chr1 27861427 - Exonic hg19 OV TCGA-04-1517 2 CDS-3'UTR Intra-chr p36.11 STE:STE11 p35.3 Transcription factor Seq+ 9941 ChimerSeq FusionScan TCGA_RNA-Seq MED18-SEL1L3 MED18 chr1 28657246 + SEL1L3 chr4 25750186 - Exonic hg19 OV TCGA-04-1517 2 In-Frame Inter-chr p35.3 p15.2 9942 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC10-NCKAP1 DNAJC10 chr2 183581799 + NCKAP1 chr2 183795516 - Exonic hg19 OV TCGA-04-1517 2 5'UTR-CDS Intra-chr q32.1 q32.1 9943 ChimerSeq FusionScan TCGA_RNA-Seq KCNQ1-TSPAN32 KCNQ1 chr11 2466714 + TSPAN32 chr11 2334883 + Exonic hg19 OV TCGA-04-1517 2 Out-of-Frame Intra-chr p15.5 p15.5 Tumor suppressor gene Seq+ 9944 ChimerSeq FusionScan TCGA_RNA-Seq XPO7-USP39 XPO7 chr8 21777299 + USP39 chr2 85846342 + Exonic hg19 OV TCGA-04-1517 2 Out-of-Frame Inter-chr p21.3 p11.2 9945 ChimerSeq FusionScan TCGA_RNA-Seq ESR1-MTHFD1L ESR1 chr6 152382259 + MTHFD1L chr6 151330954 + Exonic hg19 OV TCGA-04-1517 2 In-Frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 Seq+ 9946 ChimerSeq FusionScan TCGA_RNA-Seq LACE1-SNX3 LACE1 chr6 108616422 + SNX3 chr6 108544249 - Exonic hg19 OV TCGA-24-1603 3 Out-of-Frame Intra-chr q21 Seq+ 9947 ChimerSeq FusionScan TCGA_RNA-Seq MARS-PIP4K2C MARS chr12 57898082 + PIP4K2C chr12 57988908 + Exonic hg19 OV TCGA-24-1603 3 Out-of-Frame Intra-chr q13.3 q13.3 9948 ChimerSeq FusionScan TCGA_RNA-Seq CACNA1D-DNAH1 CACNA1D chr3 53535747 + DNAH1 chr3 52391629 + Exonic hg19 OV TCGA-24-1603 3 In-Frame Intra-chr p21.1 p21.1 Seq+ 9949 ChimerSeq FusionScan TCGA_RNA-Seq TUBB6-INTS8 TUBB6 chr18 12311052 + INTS8 chr8 95885601 + Exonic hg19 OV TCGA-24-1603 2 In-Frame Inter-chr p11.21 q22.1 9950 ChimerSeq FusionScan TCGA_RNA-Seq ZNF419-DNAJA3 ZNF419 chr19 58002965 + DNAJA3 chr16 4493017 + Exonic hg19 OV TCGA-24-1603 2 Out-of-Frame Inter-chr q13.43 Transcription factor Tumor suppressor gene 9951 ChimerSeq FusionScan TCGA_RNA-Seq ESCO1-CHST9 ESCO1 chr18 19140819 - CHST9 chr18 24524330 - Exonic hg19 OV TCGA-24-1603 2 Out-of-Frame Intra-chr q11.2 q11.2 9952 ChimerSeq FusionScan TCGA_RNA-Seq SLC30A6-BRE SLC30A6 chr2 32400430 + BRE chr2 28460068 + Exonic hg19 OV TCGA-57-1583 11 In-Frame Intra-chr p22.3 Seq+ 9953 ChimerSeq FusionScan TCGA_RNA-Seq THRA-GSDMA THRA chr17 38233191 + GSDMA chr17 38121935 + Exonic hg19 OV TCGA-57-1583 5 CDS-5'UTR Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Seq+ 9954 ChimerSeq FusionScan TCGA_RNA-Seq THRA-GSDMA THRA chr17 38233861 + GSDMA chr17 38121935 + Exonic hg19 OV TCGA-57-1583 3 CDS-5'UTR Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Seq+ 9955 ChimerSeq FusionScan TCGA_RNA-Seq PLAU-C10orf55 PLAU chr10 75672856 + C10orf55 chr10 75672833 - Exonic hg19 OV TCGA-57-1583 2 CDS-5'UTR Intra-chr q22.2 q22.2 9956 ChimerSeq FusionScan TCGA_RNA-Seq WDR33-LIMS2 WDR33 chr2 128568585 - LIMS2 chr2 128400647 - Exonic hg19 OV TCGA-25-1625 5 5'UTR-5'UTR Intra-chr q14.3 q14.3 9957 ChimerSeq FusionScan TCGA_RNA-Seq WDR33-LIMS2 WDR33 chr2 128568585 - LIMS2 chr2 128415136 - Exonic hg19 OV TCGA-25-1625 3 5'UTR-5'UTR Intra-chr q14.3 q14.3 9958 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-RSBN1L PTPN12 chr7 77256992 + RSBN1L chr7 77378740 + Exonic hg19 OV TCGA-25-1625 3 In-Frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 9959 ChimerSeq FusionScan TCGA_RNA-Seq MDFIC-PICALM MDFIC chr7 114582452 + PICALM chr11 85670103 - Exonic hg19 OV TCGA-25-1625 2 Out-of-Frame Inter-chr q31.1 q14.2 9960 ChimerSeq FusionScan TCGA_RNA-Seq RYK-CEP63 RYK chr3 133969266 - CEP63 chr3 134250686 + Exonic hg19 OV TCGA-25-1625 2 Out-of-Frame Intra-chr q22.2 TK:Ryk q22.2 9961 ChimerSeq FusionScan TCGA_RNA-Seq PITRM1-PAFAH1B3 PITRM1 chr10 3201105 - PAFAH1B3 chr19 42801517 - Exonic hg19 OV TCGA-25-1625 2 Out-of-Frame Inter-chr p15.2 q13.2 9962 ChimerSeq FusionScan TCGA_RNA-Seq NNMT-RBM7 NNMT chr11 114168880 + RBM7 chr11 114272419 + Exonic hg19 OV TCGA-25-1625 2 Out-of-Frame Intra-chr q23.2 q23.2 Seq+ 9963 ChimerSeq FusionScan TCGA_RNA-Seq CPNE2-EIF1 CPNE2 chr16 57151479 + EIF1 chr17 39846029 + Exonic hg19 OV TCGA-25-1625 2 Out-of-Frame Inter-chr q13 q21.2 9964 ChimerSeq FusionScan TCGA_RNA-Seq GAS5-SNX2 GAS5 chr1 173835314 - SNX2 chr5 122130960 + Exonic hg19 OV TCGA-25-1625 2 3'UTR-CDS Inter-chr q25.1 Tumor suppressor gene q23.2 9965 ChimerSeq FusionScan TCGA_RNA-Seq ITGB3-DYNLRB1 ITGB3 chr17 45331306 + DYNLRB1 chr20 33122431 + Exonic hg19 OV TCGA-24-1103 2 In-Frame Inter-chr q21.32 Oncogene Tumor suppressor gene q11.22 9966 ChimerSeq FusionScan TCGA_RNA-Seq ADIPOR2-NINJ2 ADIPOR2 chr12 1800357 + NINJ2 chr12 675344 - Exonic hg19 OV TCGA-24-1616 11 5'UTR-CDS Intra-chr p13.33 p13.33 Seq+ 9967 ChimerSeq FusionScan TCGA_RNA-Seq PPP1CB-PLB1 PPP1CB chr2 28975042 + PLB1 chr2 28752183 + Exonic hg19 OV TCGA-24-1616 7 In-Frame Intra-chr p23.2 p23.2 Seq+ 9968 ChimerSeq FusionScan TCGA_RNA-Seq PKN1-EMR3 PKN1 chr19 14544354 + EMR3 chr19 14749152 - Exonic hg19 OV TCGA-24-1616 7 In-Frame Intra-chr p13.12 AGC:PKN Seq+ 9969 ChimerSeq FusionScan TCGA_RNA-Seq KPNA1-MGLL KPNA1 chr3 122233603 - MGLL chr3 127500738 - Exonic hg19 OV TCGA-24-1616 2 5'UTR-CDS Intra-chr q21.1 q21.3 9970 ChimerSeq FusionScan TCGA_RNA-Seq RFC2-LIMK1 RFC2 chr7 73664068 - LIMK1 chr7 73530131 + Exonic hg19 OV TCGA-24-1616 2 In-Frame Intra-chr q11.23 q11.23 TKL:LISK 9971 ChimerSeq FusionScan TCGA_RNA-Seq LAMA4-FYN LAMA4 chr6 112575157 - FYN chr6 111995833 - Exonic hg19 OV TCGA-24-1616 2 Out-of-Frame Intra-chr q21 q21 TK:Src 9972 ChimerSeq FusionScan TCGA_RNA-Seq RPS8-TLN1 RPS8 chr1 45242446 + TLN1 chr9 35698169 - Exonic hg19 OV TCGA-24-1616 2 3'UTR-CDS Inter-chr p34.1 p13.3 9973 ChimerSeq FusionScan TCGA_RNA-Seq MKRN1-MRPS33 MKRN1 chr7 140178959 - MRPS33 chr7 140706335 - Exonic hg19 OV TCGA-36-1577 11 In-Frame Intra-chr q34 q34 Seq+ 9974 ChimerSeq FusionScan TCGA_RNA-Seq NFIX-CALR NFIX chr19 13192669 + CALR chr19 13054350 + Exonic hg19 OV TCGA-36-1577 9 In-Frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 9975 ChimerSeq FusionScan TCGA_RNA-Seq MKRN1-MRPS33 MKRN1 chr7 140178959 - MRPS33 chr7 140710460 - Exonic hg19 OV TCGA-36-1577 8 CDS-5'UTR Intra-chr q34 q34 Seq+ 9976 ChimerSeq FusionScan TCGA_RNA-Seq CAND2-IFT122 CAND2 chr3 12845130 + IFT122 chr3 129202327 + Exonic hg19 OV TCGA-36-1577 7 Out-of-Frame Intra-chr p25.2 q21.3 9977 ChimerSeq FusionScan TCGA_RNA-Seq THRAP3-TEKT2 THRAP3 chr1 36762371 + TEKT2 chr1 36550470 + Exonic hg19 OV TCGA-36-1577 5 CDS-5'UTR Intra-chr p34.3 p34.3 Seq+ 9978 ChimerSeq FusionScan TCGA_RNA-Seq PFKFB3-ECHDC3 PFKFB3 chr10 6268328 + ECHDC3 chr10 11789347 + Exonic hg19 OV TCGA-36-1577 2 Out-of-Frame Intra-chr p15.1 p14 9979 ChimerSeq FusionScan TCGA_RNA-Seq CENPP-LMO7 CENPP chr9 95094633 + LMO7 chr13 76423214 + Exonic hg19 OV TCGA-36-1577 2 In-Frame Inter-chr q22.31 q22.2 9980 ChimerSeq FusionScan TCGA_RNA-Seq OPN3-RGS7 OPN3 chr1 241803183 - RGS7 chr1 241262062 - Exonic hg19 OV TCGA-36-1577 2 Out-of-Frame Intra-chr q43 q43 Seq+ 9981 ChimerSeq FusionScan TCGA_RNA-Seq CBR4-RHOT1 CBR4 chr4 169923221 - RHOT1 chr17 30509775 + Exonic hg19 OV TCGA-36-1577 2 Out-of-Frame Inter-chr q32.3 q11.2 9982 ChimerSeq FusionScan TCGA_RNA-Seq FYTTD1-DDOST FYTTD1 chr3 197483428 + DDOST chr1 20982680 - Exonic hg19 OV TCGA-36-1577 2 In-Frame Inter-chr q29 p36.12 Seq+ 9983 ChimerSeq FusionScan TCGA_RNA-Seq TTC28-UBE2L3 TTC28 chr22 29025539 - UBE2L3 chr22 21947149 + Exonic hg19 OV TCGA-36-1577 2 In-Frame Intra-chr q12.1 q11.21 Seq+ 9984 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0146-DSCAM KIAA0146 chr8 48206619 + DSCAM chr21 41559914 - Exonic hg19 OV TCGA-36-1577 2 In-Frame Inter-chr q22.2 9985 ChimerSeq FusionScan TCGA_RNA-Seq SRPK2-MTSS1L SRPK2 chr7 104909252 - MTSS1L chr16 70699443 - Exonic hg19 OV TCGA-25-1313 4 Out-of-Frame Inter-chr q22.3 CMGC:SRPK q22.1 9986 ChimerSeq FusionScan TCGA_RNA-Seq ZNF433-DNAH17 ZNF433 chr19 12146351 - DNAH17 chr17 76547720 - Exonic hg19 OV TCGA-25-1313 4 Out-of-Frame Inter-chr p13.2 Transcription factor q25.3 Seq+ 9987 ChimerSeq FusionScan TCGA_RNA-Seq SRPK2-MTSS1L SRPK2 chr7 105029094 - MTSS1L chr16 70699443 - Exonic hg19 OV TCGA-25-1313 3 Out-of-Frame Inter-chr q22.3 CMGC:SRPK q22.1 9988 ChimerSeq FusionScan TCGA_RNA-Seq TTLL11-VWCE TTLL11 chr9 124801550 - VWCE chr11 61050377 - Exonic hg19 OV TCGA-25-1313 2 In-Frame Inter-chr q33.2 q12.2 Seq+ 9989 ChimerSeq FusionScan TCGA_RNA-Seq VPS13A-SLC44A1 VPS13A chr9 79917978 + SLC44A1 chr9 108061500 + Exonic hg19 OV TCGA-25-1313 2 In-Frame Intra-chr q21.2 q31.1 9990 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPA3-TSNARE1 HNRNPA3 chr2 178080916 + TSNARE1 chr8 143356224 - Exonic hg19 OV TCGA-25-1313 2 In-Frame Inter-chr q31.2 q24.3 9991 ChimerSeq FusionScan TCGA_RNA-Seq RTN4-KIAA0196 RTN4 chr2 55209650 - KIAA0196 chr8 126052140 - Exonic hg19 OV TCGA-25-1313 2 In-Frame Inter-chr p16.1 Tumor suppressor gene 9992 ChimerSeq FusionScan TCGA_RNA-Seq COL6A3-RPS9 COL6A3 chr2 238305369 - RPS9 chr19 54710143 + Exonic hg19 OV TCGA-31-1956 3 CDS-3'UTR Inter-chr q37.3 9993 ChimerSeq FusionScan TCGA_RNA-Seq CHN2-SKAP2 CHN2 chr7 29234606 + SKAP2 chr7 26779583 - Exonic hg19 OV TCGA-31-1956 2 In-Frame Intra-chr p14.3 p15.2 Seq+ 9994 ChimerSeq FusionScan TCGA_RNA-Seq TM9SF4-TTLL9 TM9SF4 chr20 30737569 + TTLL9 chr20 30510765 + Exonic hg19 OV TCGA-30-1862 4 Out-of-Frame Intra-chr q11.21 q11.21 Seq+ 9995 ChimerSeq FusionScan TCGA_RNA-Seq TM9SF4-TTLL9 TM9SF4 chr20 30737569 + TTLL9 chr20 30512811 + Exonic hg19 OV TCGA-30-1862 4 In-Frame Intra-chr q11.21 q11.21 Seq+ 9996 ChimerSeq FusionScan TCGA_RNA-Seq SLX1B-FOXRED1 SLX1B chr16 29467206 + FOXRED1 chr11 126146965 + Exonic hg19 OV TCGA-30-1862 2 In-Frame Inter-chr p11.2 q24.2 9997 ChimerSeq FusionScan TCGA_RNA-Seq ARID1A-FAM76A ARID1A chr1 27024031 + FAM76A chr1 28053982 + Exonic hg19 OV TCGA-30-1862 2 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p35.3 Seq+ 9998 ChimerSeq FusionScan TCGA_RNA-Seq ZSCAN1-HRC ZSCAN1 chr19 58551912 + HRC chr19 49654589 - Exonic hg19 OV TCGA-30-1862 2 Out-of-Frame Intra-chr q13.43 Transcription factor q13.33 9999 ChimerSeq FusionScan TCGA_RNA-Seq SARNP-KCNN4 SARNP chr12 56211449 - KCNN4 chr19 44280788 - Exonic hg19 OV TCGA-09-1666 4 In-Frame Inter-chr q13.2 q13.31 Seq+ 10000 ChimerSeq FusionScan TCGA_RNA-Seq EEF1B2-NCL EEF1B2 chr2 207026196 + NCL chr2 232325275 - Exonic hg19 OV TCGA-09-1666 3 Out-of-Frame Intra-chr q37.1 10001 ChimerSeq FusionScan TCGA_RNA-Seq TIAL1-PRMT2 TIAL1 chr10 121347663 - PRMT2 chr21 48068369 + Exonic hg19 OV TCGA-09-1666 2 In-Frame Inter-chr q26.11 q22.3 10002 ChimerSeq FusionScan TCGA_RNA-Seq FAM193A-TTC28 FAM193A chr4 2702271 + TTC28 chr22 28426354 - Exonic hg19 OV TCGA-09-1666 2 Out-of-Frame Inter-chr p16.3 q12.1 10003 ChimerSeq FusionScan TCGA_RNA-Seq MKNK2-AP3D1 MKNK2 chr19 2050799 - AP3D1 chr19 2102267 - Exonic hg19 OV TCGA-09-1666 2 In-Frame Intra-chr p13.3 p13.3 Seq+ 10004 ChimerSeq FusionScan TCGA_RNA-Seq ITM2B-MATR3 ITM2B chr13 48807613 + MATR3 chr5 138665033 + Exonic hg19 OV TCGA-13-0799 22 In-Frame Inter-chr q14.2 q31.2 Seq+ 10005 ChimerSeq FusionScan TCGA_RNA-Seq CEP350-TDRD5 CEP350 chr1 180010383 + TDRD5 chr1 179659830 + Exonic hg19 OV TCGA-13-0799 3 Out-of-Frame Intra-chr q25.2 q25.2 Seq+ 10006 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT6 NDUFA11 chr19 5896463 - FUT6 chr19 5832590 - Exonic hg19 OV TCGA-13-0799 3 CDS-5'UTR Intra-chr p13.3 p13.3 10007 ChimerSeq FusionScan TCGA_RNA-Seq ASAP1-VARS2 ASAP1 chr8 131124339 - VARS2 chr6 30882581 + Exonic hg19 OV TCGA-13-0799 2 CDS-3'UTR Inter-chr q24.22 10008 ChimerSeq FusionScan TCGA_RNA-Seq SBNO2-KLF16 SBNO2 chr19 1174170 - KLF16 chr19 1854759 - Exonic hg19 OV TCGA-13-0799 2 5'UTR-CDS Intra-chr p13.3 p13.3 Transcription factor 10009 ChimerSeq FusionScan TCGA_RNA-Seq TOMM20-RBM34 TOMM20 chr1 235291909 - RBM34 chr1 235295312 - Exonic hg19 OV TCGA-61-2008 7 Out-of-Frame Intra-chr q42.3 q42.3 Seq+ 10010 ChimerSeq FusionScan TCGA_RNA-Seq TOP2A-STAU1 TOP2A chr17 38560403 - STAU1 chr20 47752468 - Exonic hg19 OV TCGA-61-2008 4 In-Frame Inter-chr q21.2 q13.13 Seq+ 10011 ChimerSeq FusionScan TCGA_RNA-Seq C6orf106-KIF6 C6orf106 chr6 34664222 - KIF6 chr6 39398937 - Exonic hg19 OV TCGA-61-2008 2 Out-of-Frame Intra-chr p21.31 p21.2 Seq+ 10012 ChimerSeq FusionScan TCGA_RNA-Seq ITM2B-RB1 ITM2B chr13 48807613 + RB1 chr13 48916734 + Exonic hg19 OV TCGA-61-2109 6 In-Frame Intra-chr q14.2 q14.2 Oncogene Tumor suppressor gene Seq+ 10013 ChimerSeq FusionScan TCGA_RNA-Seq AXIN1-BBX AXIN1 chr16 396147 - BBX chr3 107466811 + Exonic hg19 OV TCGA-61-2109 3 Out-of-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene q13.12 Transcription factor Seq+ 10014 ChimerSeq FusionScan TCGA_RNA-Seq UBAP2-C15orf41 UBAP2 chr9 33923183 - C15orf41 chr15 37100524 + Exonic hg19 OV TCGA-61-2109 3 Out-of-Frame Inter-chr p13.3 q14 Seq+ 10015 ChimerSeq FusionScan TCGA_RNA-Seq P2RY6-ARHGEF17 P2RY6 chr11 72975694 + ARHGEF17 chr11 73057927 + Exonic hg19 OV TCGA-61-2109 2 5'UTR-CDS Intra-chr q13.4 q13.4 10016 ChimerSeq FusionScan TCGA_RNA-Seq VPS13C-C16orf48 VPS13C chr15 62221699 - C16orf48 chr16 67697459 - Exonic hg19 OV TCGA-61-2109 2 Out-of-Frame Inter-chr q22.2 10017 ChimerSeq FusionScan TCGA_RNA-Seq ZNF805-ETFB ZNF805 chr19 57752289 + ETFB chr19 51857562 - Exonic hg19 OV TCGA-24-1551 26 In-Frame Intra-chr q13.43 Transcription factor q13.41 Seq+ 10018 ChimerSeq FusionScan TCGA_RNA-Seq ZDHHC5-SMTNL1 ZDHHC5 chr11 57435659 + SMTNL1 chr11 57313353 + Exonic hg19 OV TCGA-24-1551 15 5'UTR-CDS Intra-chr q12.1 q12.1 Seq+ 10019 ChimerSeq FusionScan TCGA_RNA-Seq TRAPPC10-RRP1 TRAPPC10 chr21 45432441 + RRP1 chr21 45211230 + Exonic hg19 OV TCGA-24-1551 13 In-Frame Intra-chr q22.3 q22.3 Seq+ 10020 ChimerSeq FusionScan TCGA_RNA-Seq CABIN1-MIF CABIN1 chr22 24530382 + MIF chr22 24236958 + Exonic hg19 OV TCGA-24-1551 11 In-Frame Intra-chr q11.23 Tumor suppressor gene Seq+ 10021 ChimerSeq FusionScan TCGA_RNA-Seq WDR59-CTRB1 WDR59 chr16 74982416 - CTRB1 chr16 75256665 + Exonic hg19 OV TCGA-24-1551 3 In-Frame Intra-chr q23.1 q23.1 10022 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC2-SLC26A5 DNAJC2 chr7 102982210 - SLC26A5 chr7 102993373 - Exonic hg19 OV TCGA-24-1551 3 Out-of-Frame Intra-chr q22.1 q22.1 Seq+ 10023 ChimerSeq FusionScan TCGA_RNA-Seq SET-GLE1 SET chr9 131447492 + GLE1 chr9 131284946 + Exonic hg19 OV TCGA-24-1551 3 Out-of-Frame Intra-chr q34.11 q34.11 Seq+ 10024 ChimerSeq FusionScan TCGA_RNA-Seq NNMT-RBM7 NNMT chr11 114168880 + RBM7 chr11 114272419 + Exonic hg19 OV TCGA-24-1551 3 Out-of-Frame Intra-chr q23.2 q23.2 Seq+ 10025 ChimerSeq FusionScan TCGA_RNA-Seq RBM10-LCMT1 RBM10 chrX 47006897 + LCMT1 chr16 25175918 + Exonic hg19 OV TCGA-24-1551 2 In-Frame Inter-chr p11.3 p12.1 10026 ChimerSeq FusionScan TCGA_RNA-Seq PTK2-TSTA3 PTK2 chr8 141684396 - TSTA3 chr8 144698893 - Exonic hg19 OV TCGA-24-1551 2 CDS-5'UTR Intra-chr q24.3 Seq+ 10027 ChimerSeq FusionScan TCGA_RNA-Seq SGPL1-ADAMTS14 SGPL1 chr10 72576636 + ADAMTS14 chr10 72492009 + Exonic hg19 OV TCGA-24-1551 2 Out-of-Frame Intra-chr q22.1 q22.1 Seq+ 10028 ChimerSeq FusionScan TCGA_RNA-Seq NAB1-MFSD6 NAB1 chr2 191537878 + MFSD6 chr2 191353382 + Exonic hg19 OV TCGA-24-1551 2 Out-of-Frame Intra-chr q32.2 q32.2 Seq+ 10029 ChimerSeq FusionScan TCGA_RNA-Seq RGS6-KIAA0247 RGS6 chr14 72431592 + KIAA0247 chr14 70170111 + Exonic hg19 OV TCGA-24-1551 2 Out-of-Frame Intra-chr q24.2 10030 ChimerSeq FusionScan TCGA_RNA-Seq NSUN2-SRD5A1 NSUN2 chr5 6632711 - SRD5A1 chr5 6656190 + Exonic hg19 OV TCGA-24-1551 2 3'UTR-3'UTR Intra-chr p15.31 p15.31 10031 ChimerSeq FusionScan TCGA_RNA-Seq PSPH-UBE3C PSPH chr7 56118830 - UBE3C chr7 156961741 + Exonic hg19 OV TCGA-24-1551 2 5'UTR-CDS Intra-chr p11.2 q36.3 10032 ChimerSeq FusionScan TCGA_RNA-Seq ATP8A1-CRMP1 ATP8A1 chr4 42626552 - CRMP1 chr4 5844888 - Exonic hg19 OV TCGA-25-1324 17 In-Frame Intra-chr p13 p16.2 Seq+ 10033 ChimerSeq FusionScan TCGA_RNA-Seq PVR-HPN PVR chr19 45162033 + HPN chr19 35556153 + Exonic hg19 OV TCGA-25-1324 9 In-Frame Intra-chr q13.31 q13.11 Seq+ 10034 ChimerSeq FusionScan TCGA_RNA-Seq PVR-HPN PVR chr19 45162168 + HPN chr19 35556153 + Exonic hg19 OV TCGA-25-1324 5 In-Frame Intra-chr q13.31 q13.11 Seq+ 10035 ChimerSeq FusionScan TCGA_RNA-Seq PVR-HPN PVR chr19 45161178 + HPN chr19 35556153 + Exonic hg19 OV TCGA-25-1324 4 In-Frame Intra-chr q13.31 q13.11 Seq+ 10036 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0195-CASKIN2 KIAA0195 chr17 73482507 + CASKIN2 chr17 73504366 - Exonic hg19 OV TCGA-25-1324 3 In-Frame Intra-chr q25.1 Seq+ 10037 ChimerSeq FusionScan TCGA_RNA-Seq NEK3-DZIP1 NEK3 chr13 52733677 - DZIP1 chr13 96277183 - Exonic hg19 OV TCGA-25-1324 2 5'UTR-CDS Intra-chr q14.3 Other:NEK q32.1 Transcription factor 10038 ChimerSeq FusionScan TCGA_RNA-Seq TPST1-ANLN TPST1 chr7 65751696 + ANLN chr7 36435874 + Exonic hg19 OV TCGA-25-1324 2 In-Frame Intra-chr q11.21 p14.2 10039 ChimerSeq FusionScan TCGA_RNA-Seq C15orf40-BTBD1 C15orf40 chr15 83678988 - BTBD1 chr15 83699080 - Exonic hg19 OV TCGA-13-0905 3 In-Frame Intra-chr q25.2 q25.2 10040 ChimerSeq FusionScan TCGA_RNA-Seq CAT-CD3D CAT chr11 34460626 + CD3D chr11 118210621 - Exonic hg19 OV TCGA-13-0905 3 Out-of-Frame Intra-chr p13 Tumor suppressor gene q23.3 Seq+ 10041 ChimerSeq FusionScan TCGA_RNA-Seq CAT-CD3D CAT chr11 34460626 + CD3D chr11 118210209 - Exonic hg19 OV TCGA-13-0905 2 Out-of-Frame Intra-chr p13 Tumor suppressor gene q23.3 Seq+ 10042 ChimerSeq FusionScan TCGA_RNA-Seq SETD3-GNAS SETD3 chr14 99929822 - GNAS chr20 57470666 + Exonic hg19 OV TCGA-13-0905 2 In-Frame Inter-chr q32.2 q13.32 Oncogene 10043 ChimerSeq FusionScan TCGA_RNA-Seq USP6NL-UBE3A USP6NL chr10 11653441 - UBE3A chr15 25585375 - Exonic hg19 OV TCGA-13-0905 2 5'UTR-CDS Inter-chr p14 q11.2 10044 ChimerSeq FusionScan TCGA_RNA-Seq ROCK1-DHX9 ROCK1 chr18 18690778 - DHX9 chr1 182847155 + Exonic hg19 OV TCGA-13-0905 2 Out-of-Frame Inter-chr q11.1 AGC:DMPK q25.3 10045 ChimerSeq FusionScan TCGA_RNA-Seq ARF5-SORBS3 ARF5 chr7 127229648 + SORBS3 chr8 22429852 + Exonic hg19 OV TCGA-13-0905 2 Out-of-Frame Inter-chr q32.1 p21.3 10046 ChimerSeq FusionScan TCGA_RNA-Seq CAT-CD3D CAT chr11 34460626 + CD3D chr11 118211308 - Exonic hg19 OV TCGA-13-0905 2 Out-of-Frame Intra-chr p13 Tumor suppressor gene q23.3 Seq+ 10047 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R21-TTC7B PPP1R21 chr2 48737252 + TTC7B chr14 91124731 - Exonic hg19 OV TCGA-13-0905 2 In-Frame Inter-chr p16.3 q32.11 Seq+ 10048 ChimerSeq FusionScan TCGA_RNA-Seq TYMS-CARKD TYMS chr18 662320 + CARKD chr13 111274562 + Exonic hg19 OV TCGA-13-0905 2 3'UTR-CDS Inter-chr p11.32 10049 ChimerSeq FusionScan TCGA_RNA-Seq MARK3-GLIS3 MARK3 chr14 103894777 + GLIS3 chr9 3856184 - Exonic hg19 OV TCGA-61-1919 4 Out-of-Frame Inter-chr q32.32 CAMK:CAMKL p24.2 Transcription factor Seq+ 10050 ChimerSeq FusionScan TCGA_RNA-Seq ZC3H12C-VPS52 ZC3H12C chr11 110008139 + VPS52 chr6 33232677 - Exonic hg19 OV TCGA-61-1919 2 CDS-5'UTR Inter-chr q22.3 Seq+ 10051 ChimerSeq FusionScan TCGA_RNA-Seq TNS3-AMPH TNS3 chr7 47331552 - AMPH chr7 38433814 - Exonic hg19 OV TCGA-61-1919 2 Out-of-Frame Intra-chr p12.3 p14.1 10052 ChimerSeq FusionScan TCGA_RNA-Seq MUC16-RNASEH2B MUC16 chr19 9080450 - RNASEH2B chr13 51501542 + Exonic hg19 OV TCGA-09-0367 3 In-Frame Inter-chr p13.2 q14.3 Seq+ 10053 ChimerSeq FusionScan TCGA_RNA-Seq PRRC2A-UHRF1BP1 PRRC2A chr6 31590678 + UHRF1BP1 chr6 34789429 + Exonic hg19 OV TCGA-09-0367 3 Out-of-Frame Intra-chr p21.31 10054 ChimerSeq FusionScan TCGA_RNA-Seq RTN4RL2-CTNND1 RTN4RL2 chr11 57235563 + CTNND1 chr11 57561481 + Exonic hg19 OV TCGA-09-0367 3 In-Frame Intra-chr q12.1 q12.1 Tumor suppressor gene Seq+ 10055 ChimerSeq FusionScan TCGA_RNA-Seq TAGLN-SIDT2 TAGLN chr11 117070148 + SIDT2 chr11 117066517 + Exonic hg19 OV TCGA-09-0367 2 5'UTR-CDS Intra-chr q23.3 Tumor suppressor gene q23.3 10056 ChimerSeq FusionScan TCGA_RNA-Seq C3orf37-BCAM C3orf37 chr3 129017378 + BCAM chr19 45322838 + Exonic hg19 OV TCGA-09-0367 2 Out-of-Frame Inter-chr q13.32 10057 ChimerSeq FusionScan TCGA_RNA-Seq CYTH3-DAGLB CYTH3 chr7 6312104 - DAGLB chr7 6452665 - Exonic hg19 OV TCGA-13-0768 2 Out-of-Frame Intra-chr p22.1 p22.1 10058 ChimerSeq FusionScan TCGA_RNA-Seq WDR70-RNASEH2A WDR70 chr5 37727147 + RNASEH2A chr19 12918019 + Exonic hg19 OV TCGA-13-0768 2 Out-of-Frame Inter-chr p13.2 p13.13 10059 ChimerSeq FusionScan TCGA_RNA-Seq ADSL-MKL1 ADSL chr22 40750331 + MKL1 chr22 40807911 - Exonic hg19 OV TCGA-13-0768 2 Out-of-Frame Intra-chr q13.1 q13.2 Seq+ 10060 ChimerSeq FusionScan TCGA_RNA-Seq MECOM-LRRC34 MECOM chr3 169381123 - LRRC34 chr3 169526533 - Exonic hg19 OV TCGA-13-0768 2 In-Frame Intra-chr q26.2 Transcription factor q26.2 Seq+ 10061 ChimerSeq FusionScan TCGA_RNA-Seq CHERP-CPAMD8 CHERP chr19 16652680 - CPAMD8 chr19 17017927 - Exonic hg19 OV TCGA-13-0768 2 Out-of-Frame Intra-chr p13.11 p13.11 Seq+ 10062 ChimerSeq FusionScan TCGA_RNA-Seq CHSY3-NINJ2 CHSY3 chr5 129244053 + NINJ2 chr12 675344 - Exonic hg19 OV TCGA-24-1104 20 In-Frame Inter-chr q23.3 p13.33 Seq+ 10063 ChimerSeq FusionScan TCGA_RNA-Seq SERPINB1-RNPEP SERPINB1 chr6 2836089 - RNPEP chr1 201958031 + Exonic hg19 OV TCGA-24-1104 2 In-Frame Inter-chr p25.2 q32.1 10064 ChimerSeq FusionScan TCGA_RNA-Seq GPN2-C1orf172 GPN2 chr1 27215459 - C1orf172 chr1 27276642 - Exonic hg19 OV TCGA-24-1104 2 In-Frame Intra-chr p36.11 Seq+ 10065 ChimerSeq FusionScan TCGA_RNA-Seq EZH1-ZC3H3 EZH1 chr17 40880842 - ZC3H3 chr8 144523290 - Exonic hg19 OV TCGA-36-1574 14 In-Frame Inter-chr q21.2 Tumor suppressor gene Seq+ 10066 ChimerSeq FusionScan TCGA_RNA-Seq NOTCH2-PSMA5 NOTCH2 chr1 120611947 - PSMA5 chr1 109964548 - Exonic hg19 OV TCGA-36-1574 12 Out-of-Frame Intra-chr p12 Oncogene Tumor suppressor gene p13.3 Seq+ 10067 ChimerSeq FusionScan TCGA_RNA-Seq FRMD8-SLC22A20 FRMD8 chr11 65172539 + SLC22A20 chr11 65003879 + Exonic hg19 OV TCGA-36-1574 6 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 10068 ChimerSeq FusionScan TCGA_RNA-Seq DDX60L-DSCAM DDX60L chr4 169374274 - DSCAM chr21 41559914 - Exonic hg19 OV TCGA-36-1574 6 In-Frame Inter-chr q32.3 q22.2 Seq+ 10069 ChimerSeq FusionScan TCGA_RNA-Seq LARGE-OPA3 LARGE chr22 33960833 - OPA3 chr19 46057169 - Exonic hg19 OV TCGA-36-1574 5 In-Frame Inter-chr q13.32 Seq+ 10070 ChimerSeq FusionScan TCGA_RNA-Seq NOTCH2-PSMA5 NOTCH2 chr1 120611947 - PSMA5 chr1 109957985 - Exonic hg19 OV TCGA-36-1574 5 Out-of-Frame Intra-chr p12 Oncogene Tumor suppressor gene p13.3 Seq+ 10071 ChimerSeq FusionScan TCGA_RNA-Seq LARGE-OPA3 LARGE chr22 33960833 - OPA3 chr19 46032714 - Exonic hg19 OV TCGA-36-1574 3 In-Frame Inter-chr q13.32 Seq+ 10072 ChimerSeq FusionScan TCGA_RNA-Seq TPTE2-KDELR3 TPTE2 chr13 20066989 - KDELR3 chr22 38870527 + Exonic hg19 OV TCGA-36-1574 3 Out-of-Frame Inter-chr q12.11 Tumor suppressor gene q13.1 10073 ChimerSeq FusionScan TCGA_RNA-Seq UBA2-GPI UBA2 chr19 34925873 + GPI chr19 34887205 + Exonic hg19 OV TCGA-36-1574 2 In-Frame Intra-chr q13.11 Seq+ 10074 ChimerSeq FusionScan TCGA_RNA-Seq GART-DONSON GART chr21 34914370 - DONSON chr21 34954361 - Exonic hg19 OV TCGA-36-1574 2 5'UTR-CDS Intra-chr q22.11 10075 ChimerSeq FusionScan TCGA_RNA-Seq VCL-ADK VCL chr10 75758133 + ADK chr10 76349039 + Exonic hg19 OV TCGA-04-1530 4 In-Frame Intra-chr q22.2 q22.2 Seq+ 10076 ChimerSeq FusionScan TCGA_RNA-Seq ODZ4-ZDHHC18 ODZ4 chr11 79151552 - ZDHHC18 chr1 27158937 + Exonic hg19 OV TCGA-04-1530 2 5'UTR-CDS Inter-chr p36.11 10077 ChimerSeq FusionScan TCGA_RNA-Seq KPNA1-CCDC58 KPNA1 chr3 122233603 - CCDC58 chr3 122081874 - Exonic hg19 OV TCGA-04-1530 2 5'UTR-CDS Intra-chr q21.1 q21.1 Seq+ 10078 ChimerSeq FusionScan TCGA_RNA-Seq YWHAG-GPR37L1 YWHAG chr7 75988038 - GPR37L1 chr1 202096868 + Exonic hg19 OV TCGA-24-1471 16 In-Frame Inter-chr q11.23 q32.1 Seq+ 10079 ChimerSeq FusionScan TCGA_RNA-Seq MAP4-HADHA MAP4 chr3 48130262 - HADHA chr2 26462011 - Exonic hg19 OV TCGA-24-1471 12 5'UTR-CDS Inter-chr p21.31 p23.3 Seq+ 10080 ChimerSeq FusionScan TCGA_RNA-Seq RGNEF-SEZ6 RGNEF chr5 72980709 + SEZ6 chr17 27296970 - Exonic hg19 OV TCGA-24-1471 5 In-Frame Inter-chr q11.2 10081 ChimerSeq FusionScan TCGA_RNA-Seq RPL30-GUK1 RPL30 chr8 99057170 - GUK1 chr1 228336365 + Exonic hg19 OV TCGA-24-1471 2 Out-of-Frame Inter-chr q22.2 q42.13 10082 ChimerSeq FusionScan TCGA_RNA-Seq DNAJB6-FBL DNAJB6 chr7 157159255 + FBL chr19 40331155 - Exonic hg19 OV TCGA-24-1471 2 In-Frame Inter-chr q36.3 10083 ChimerSeq FusionScan TCGA_RNA-Seq PDE8A-N4BP2L2 PDE8A chr15 85658718 + N4BP2L2 chr13 33095586 - Exonic hg19 OV TCGA-24-1471 2 Out-of-Frame Inter-chr q25.3 q13.1 10084 ChimerSeq FusionScan TCGA_RNA-Seq LPAR3-SAMD13 LPAR3 chr1 85331067 - SAMD13 chr1 84791319 + Exonic hg19 OV TCGA-24-1471 2 Out-of-Frame Intra-chr p22.3 p31.1 10085 ChimerSeq FusionScan TCGA_RNA-Seq PKP4-PDE1A PKP4 chr2 159459616 + PDE1A chr2 183011879 - Exonic hg19 OV TCGA-23-2081 27 In-Frame Intra-chr q24.1 q32.1 Seq+ 10086 ChimerSeq FusionScan TCGA_RNA-Seq BCAP29-SEPT9 BCAP29 chr7 107224427 + SEPT9 chr17 75478225 + Exonic hg19 OV TCGA-23-2081 2 In-Frame Inter-chr 10087 ChimerSeq FusionScan TCGA_RNA-Seq TGFBR3-FUBP1 TGFBR3 chr1 92262843 - FUBP1 chr1 78435699 - Exonic hg19 OV TCGA-23-2081 2 In-Frame Intra-chr p22.1 Tumor suppressor gene p31.1 Oncogene 10088 ChimerSeq FusionScan TCGA_RNA-Seq NCALD-GRHL2 NCALD chr8 103032464 - GRHL2 chr8 102676681 + Exonic hg19 OV TCGA-23-2081 2 5'UTR-CDS Intra-chr q22.3 q22.3 Transcription factor 10089 ChimerSeq FusionScan TCGA_RNA-Seq DTX4-KRT7 DTX4 chr11 58949935 + KRT7 chr12 52631292 + Exonic hg19 OV TCGA-23-2081 2 In-Frame Inter-chr q12.1 q13.13 10090 ChimerSeq FusionScan TCGA_RNA-Seq FMR1-ATRX FMR1 chrX 146993748 + ATRX chrX 76829823 - Exonic hg19 OV TCGA-23-2081 2 Out-of-Frame Intra-chr q27.3 q21.1 Oncogene 10091 ChimerSeq FusionScan TCGA_RNA-Seq ZNF540-PTPN12 ZNF540 chr19 38042567 + PTPN12 chr7 77200394 + Exonic hg19 OV TCGA-23-2081 2 5'UTR-5'UTR Inter-chr q13.12 Transcription factor q11.23 Tumor suppressor gene 10092 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT6 NDUFA11 chr19 5896463 - FUT6 chr19 5832590 - Exonic hg19 OV TCGA-23-2081 2 CDS-5'UTR Intra-chr p13.3 p13.3 10093 ChimerSeq FusionScan TCGA_RNA-Seq ITGB3-DYNLRB1 ITGB3 chr17 45331306 + DYNLRB1 chr20 33122431 + Exonic hg19 OV TCGA-24-1103 2 In-Frame Inter-chr q21.32 Oncogene Tumor suppressor gene q11.22 10094 ChimerSeq FusionScan TCGA_RNA-Seq ACO2-UBE2A ACO2 chr22 41865186 + UBE2A chrX 118716550 + Exonic hg19 OV TCGA-09-1659 22 5'UTR-CDS Inter-chr q13.2 q24 Seq+ 10095 ChimerSeq FusionScan TCGA_RNA-Seq ACO2-UBE2A ACO2 chr22 41865186 + UBE2A chrX 118715469 + Exonic hg19 OV TCGA-09-1659 14 5'UTR-CDS Inter-chr q13.2 q24 Seq+ 10096 ChimerSeq FusionScan TCGA_RNA-Seq CRK-PITPNA CRK chr17 1359170 - PITPNA chr17 1442246 - Exonic hg19 OV TCGA-09-1659 9 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 10097 ChimerSeq FusionScan TCGA_RNA-Seq FAM222B-C16orf62 FAM222B chr17 27169699 - C16orf62 chr16 19627435 + Exonic hg19 OV TCGA-09-1659 7 5'UTR-CDS Inter-chr q11.2 p12.3 Seq+ 10098 ChimerSeq FusionScan TCGA_RNA-Seq RPTOR-GAA RPTOR chr17 78811797 + GAA chr17 78078353 + Exonic hg19 OV TCGA-09-1659 3 CDS-5'UTR Intra-chr q25.3 q25.3 Seq+ 10099 ChimerSeq FusionScan TCGA_RNA-Seq UVRAG-TMEM194A UVRAG chr11 75728024 + TMEM194A chr12 57453842 - Exonic hg19 OV TCGA-09-1659 2 In-Frame Inter-chr q13.5 Tumor suppressor gene 10100 ChimerSeq FusionScan TCGA_RNA-Seq THADA-PTTG1 THADA chr2 43712372 - PTTG1 chr5 159849308 + Exonic hg19 OV TCGA-09-1659 2 CDS-5'UTR Inter-chr p21 q33.3 10101 ChimerSeq FusionScan TCGA_RNA-Seq MRPL30-ZFAND6 MRPL30 chr2 99797712 + ZFAND6 chr15 80412669 + Exonic hg19 OV TCGA-09-1659 2 5'UTR-5'UTR Inter-chr q11.2 q25.1 10102 ChimerSeq FusionScan TCGA_RNA-Seq DSTYK-LEMD1 DSTYK chr1 205126400 - LEMD1 chr1 205389702 - Exonic hg19 OV TCGA-09-1659 2 CDS-5'UTR Intra-chr q32.1 q32.1 Seq+ 10103 ChimerSeq FusionScan TCGA_RNA-Seq SPRED3-RFXANK SPRED3 chr19 38885116 + RFXANK chr19 19304747 + Exonic hg19 OV TCGA-09-1659 2 3'UTR-5'UTR Intra-chr q13.2 p13.11 10104 ChimerSeq FusionScan TCGA_RNA-Seq JAZF1-HIBADH JAZF1 chr7 28031527 - HIBADH chr7 27672064 - Exonic hg19 OV TCGA-09-1659 2 Out-of-Frame Intra-chr p15.1 Transcription factor p15.2 Seq+ 10105 ChimerSeq FusionScan TCGA_RNA-Seq ZNF329-DAP3 ZNF329 chr19 58662118 - DAP3 chr1 155706736 + Exonic hg19 OV TCGA-09-1659 2 5'UTR-CDS Inter-chr q13.43 Transcription factor q22 10106 ChimerSeq FusionScan TCGA_RNA-Seq HS2ST1-NXNL2 HS2ST1 chr1 87380843 + NXNL2 chr9 91190001 + Exonic hg19 OV TCGA-09-1659 2 CDS-3'UTR Inter-chr p22.3 q22.1 Seq+ 10107 ChimerSeq FusionScan TCGA_RNA-Seq LAMA5-GRB7 LAMA5 chr20 60907427 - GRB7 chr17 37903003 + Exonic hg19 OV TCGA-09-1659 2 In-Frame Inter-chr q13.33 q12 10108 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT6 NDUFA11 chr19 5896463 - FUT6 chr19 5832590 - Exonic hg19 OV TCGA-09-1659 2 CDS-5'UTR Intra-chr p13.3 p13.3 10109 ChimerSeq FusionScan TCGA_RNA-Seq SMARCA4-C19orf38 SMARCA4 chr19 11170863 + C19orf38 chr19 10973845 + Exonic hg19 OV TCGA-09-1659 2 Out-of-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 10110 ChimerSeq FusionScan TCGA_RNA-Seq ERLEC1-SPTBN1 ERLEC1 chr2 54021586 + SPTBN1 chr2 54876122 + Exonic hg19 OV TCGA-09-1659 2 Out-of-Frame Intra-chr p16.2 p16.2 Tumor suppressor gene 10111 ChimerSeq FusionScan TCGA_RNA-Seq PUM1-NKAIN1 PUM1 chr1 31501642 - NKAIN1 chr1 31661034 - Exonic hg19 OV TCGA-30-1857 5 In-Frame Intra-chr p35.2 p35.2 Seq+ 10112 ChimerSeq FusionScan TCGA_RNA-Seq PPARA-POLDIP3 PPARA chr22 46547873 + POLDIP3 chr22 42983578 - Exonic hg19 OV TCGA-30-1857 5 5'UTR-CDS Intra-chr q13.31 Tumor suppressor gene Transcription factor q13.2 Seq+ 10113 ChimerSeq FusionScan TCGA_RNA-Seq BRCA1-AARSD1 BRCA1 chr17 41277293 - AARSD1 chr17 41103911 - Exonic hg19 OV TCGA-30-1857 3 5'UTR-CDS Intra-chr q21.31 Oncogene Tumor suppressor gene q21.31 10114 ChimerSeq FusionScan TCGA_RNA-Seq PIP5K1A-VPS45 PIP5K1A chr1 151211654 + VPS45 chr1 150116886 + Exonic hg19 OV TCGA-30-1857 3 Out-of-Frame Intra-chr q21.3 q21.2 10115 ChimerSeq FusionScan TCGA_RNA-Seq BTN2A1-SPINT2 BTN2A1 chr6 26460056 + SPINT2 chr19 38778515 + Exonic hg19 OV TCGA-30-1857 2 In-Frame Inter-chr p22.2 q13.2 Tumor suppressor gene 10116 ChimerSeq FusionScan TCGA_RNA-Seq AAK1-C2orf42 AAK1 chr2 69783991 - C2orf42 chr2 70377696 - Exonic hg19 OV TCGA-24-1423 24 Out-of-Frame Intra-chr p13.3 Other:NAK p13.3 Seq+ 10117 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D23-C3orf26 TBC1D23 chr3 100039815 + C3orf26 chr3 99865816 + Exonic hg19 OV TCGA-24-1423 2 Out-of-Frame Intra-chr q12.1 Seq+ 10118 ChimerSeq FusionScan TCGA_RNA-Seq WWP2-WWOX WWP2 chr16 69922152 + WWOX chr16 78420756 + Exonic hg19 OV TCGA-24-1423 2 Out-of-Frame Intra-chr q22.1 q23.1 Tumor suppressor gene 10119 ChimerSeq FusionScan TCGA_RNA-Seq XPR1-AHNAK XPR1 chr1 180601406 + AHNAK chr11 62259303 - Exonic hg19 OV TCGA-61-1740 5 In-Frame Inter-chr q25.3 q12.3 Tumor suppressor gene Seq+ 10120 ChimerSeq FusionScan TCGA_RNA-Seq SFXN5-C2orf65 SFXN5 chr2 73226077 - C2orf65 chr2 74789550 - Exonic hg19 OV TCGA-61-1740 2 In-Frame Intra-chr p13.2 10121 ChimerSeq FusionScan TCGA_RNA-Seq KAT6B-ADK KAT6B chr10 76603236 + ADK chr10 76349039 + Exonic hg19 OV TCGA-24-1553 19 In-Frame Intra-chr Oncogene q22.2 Seq+ 10122 ChimerSeq FusionScan TCGA_RNA-Seq KCNMA1-DLG5 KCNMA1 chr10 79397022 - DLG5 chr10 79584234 - Exonic hg19 OV TCGA-24-1553 9 In-Frame Intra-chr q22.3 q22.3 Seq+ 10123 ChimerSeq FusionScan TCGA_RNA-Seq CAMSAP1-KCNT1 CAMSAP1 chr9 138758301 - KCNT1 chr9 138656876 + Exonic hg19 OV TCGA-24-1553 7 In-Frame Intra-chr q34.3 q34.3 Seq+ 10124 ChimerSeq FusionScan TCGA_RNA-Seq SLC34A2-ZCCHC4 SLC34A2 chr4 25657512 + ZCCHC4 chr4 25363480 + Exonic hg19 OV TCGA-24-1553 7 5'UTR-CDS Intra-chr p15.2 p15.2 Seq+ 10125 ChimerSeq FusionScan TCGA_RNA-Seq SLC34A2-ZCCHC4 SLC34A2 chr4 25657512 + ZCCHC4 chr4 25351113 + Exonic hg19 OV TCGA-24-1553 6 5'UTR-CDS Intra-chr p15.2 p15.2 Seq+ 10126 ChimerSeq FusionScan TCGA_RNA-Seq ZFAND3-DSCAM ZFAND3 chr6 37787792 + DSCAM chr21 41741172 - Exonic hg19 OV TCGA-24-1553 5 Out-of-Frame Inter-chr p21.2 q22.2 Seq+ 10127 ChimerSeq FusionScan TCGA_RNA-Seq PHF12-DNM2 PHF12 chr17 27240896 - DNM2 chr19 10883154 + Exonic hg19 OV TCGA-24-1553 5 Out-of-Frame Inter-chr q11.2 p13.2 Seq+ 10128 ChimerSeq FusionScan TCGA_RNA-Seq RNF19A-SPAG1 RNF19A chr8 101299728 - SPAG1 chr8 101252630 + Exonic hg19 OV TCGA-24-1553 5 Out-of-Frame Intra-chr q22.2 q22.2 Seq+ 10129 ChimerSeq FusionScan TCGA_RNA-Seq SAMD12-SNTB1 SAMD12 chr8 119592953 - SNTB1 chr8 121644891 - Exonic hg19 OV TCGA-24-1553 3 Out-of-Frame Intra-chr q24.12 q24.12 Seq+ 10130 ChimerSeq FusionScan TCGA_RNA-Seq FANCD2-CSF2RB FANCD2 chr3 10068157 + CSF2RB chr22 37318077 + Exonic hg19 OV TCGA-24-1553 3 5'UTR-5'UTR Inter-chr p25.3 Oncogene q12.3 10131 ChimerSeq FusionScan TCGA_RNA-Seq ASH1L-C1orf87 ASH1L chr1 155349833 - C1orf87 chr1 60521110 - Exonic hg19 OV TCGA-24-1553 2 Out-of-Frame Intra-chr q22 Transcription factor p32.1 Seq+ 10132 ChimerSeq FusionScan TCGA_RNA-Seq RPL24-MAP2K5 RPL24 chr3 101404661 - MAP2K5 chr15 68061939 + Exonic hg19 OV TCGA-24-1553 2 In-Frame Inter-chr q12.3 q23 STE:STE7 10133 ChimerSeq FusionScan TCGA_RNA-Seq DSC2-DTNB DSC2 chr18 28681865 - DTNB chr2 25705742 - Exonic hg19 OV TCGA-24-1553 2 Out-of-Frame Inter-chr q12.1 Tumor suppressor gene p23.3 10134 ChimerSeq FusionScan TCGA_RNA-Seq KCNMA1-DLG5 KCNMA1 chr10 79397022 - DLG5 chr10 79556352 - Exonic hg19 OV TCGA-24-1553 2 Out-of-Frame Intra-chr q22.3 q22.3 Seq+ 10135 ChimerSeq FusionScan TCGA_RNA-Seq ASH1L-NCF2 ASH1L chr1 155531943 - NCF2 chr1 183546842 - Exonic hg19 OV TCGA-24-1553 2 5'UTR-CDS Intra-chr q22 Transcription factor q25.3 10136 ChimerSeq FusionScan TCGA_RNA-Seq PTPRK-C11orf48 PTPRK chr6 128841403 - C11orf48 chr11 62432445 - Exonic hg19 OV TCGA-24-1553 2 In-Frame Inter-chr Tumor suppressor gene 10137 ChimerSeq FusionScan TCGA_RNA-Seq C3orf17-NRBP1 C3orf17 chr3 112736294 - NRBP1 chr2 27659619 + Exonic hg19 OV TCGA-24-1553 2 Out-of-Frame Inter-chr p23.3 Other:NRBP Tumor suppressor gene 10138 ChimerSeq FusionScan TCGA_RNA-Seq PRRX2-PPP2R4 PRRX2 chr9 132428405 + PPP2R4 chr9 131882791 + Exonic hg19 OV TCGA-24-1553 2 In-Frame Intra-chr q34.11 Transcription factor Tumor suppressor gene Seq+ 10139 ChimerSeq FusionScan TCGA_RNA-Seq LYAR-CTBP1 LYAR chr4 4285347 - CTBP1 chr4 1222131 - Exonic hg19 OV TCGA-25-2391 5 Out-of-Frame Intra-chr p16.3 p16.3 Seq+ 10140 ChimerSeq FusionScan TCGA_RNA-Seq ALMS1-TNC ALMS1 chr2 73800551 + TNC chr9 117804620 - Exonic hg19 OV TCGA-25-2391 4 Out-of-Frame Inter-chr p13.1 q33.1 10141 ChimerSeq FusionScan TCGA_RNA-Seq GAK-DERL2 GAK chr4 905460 - DERL2 chr17 5388536 - Exonic hg19 OV TCGA-25-2391 2 Out-of-Frame Inter-chr p16.3 Other:NAK p13.2 10142 ChimerSeq FusionScan TCGA_RNA-Seq POLA1-TSPAN7 POLA1 chrX 24767109 + TSPAN7 chrX 38525374 + Exonic hg19 OV TCGA-13-1407 7 In-Frame Intra-chr p22.11 p11.4 Seq+ 10143 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 OV TCGA-13-1407 2 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 10144 ChimerSeq FusionScan TCGA_RNA-Seq WRAP73-GRB14 WRAP73 chr1 3553558 - GRB14 chr2 165354000 - Exonic hg19 OV TCGA-13-1407 2 In-Frame Inter-chr p36.32 q24.3 10145 ChimerSeq FusionScan TCGA_RNA-Seq CRIP2-NAPRT1 CRIP2 chr14 105941242 + NAPRT1 chr8 144660113 - Exonic hg19 OV TCGA-13-1407 2 In-Frame Inter-chr q32.33 10146 ChimerSeq FusionScan TCGA_RNA-Seq ATG4D-UHRF1 ATG4D chr19 10655001 + UHRF1 chr19 4929233 + Exonic hg19 OV TCGA-13-1407 2 In-Frame Intra-chr p13.2 p13.3 Seq+ 10147 ChimerSeq FusionScan TCGA_RNA-Seq PSMD13-NCOR2 PSMD13 chr11 239076 + NCOR2 chr12 124815444 - Exonic hg19 OV TCGA-13-1407 2 Out-of-Frame Inter-chr p15.5 q24.31 10148 ChimerSeq FusionScan TCGA_RNA-Seq FAM195B-DUS1L FAM195B chr17 79781084 - DUS1L chr17 80018837 - Exonic hg19 OV TCGA-13-1407 2 3'UTR-CDS Intra-chr q25.3 10149 ChimerSeq FusionScan TCGA_RNA-Seq C19orf48-KLK7 C19orf48 chr19 51305473 - KLK7 chr19 51485170 - Exonic hg19 OV TCGA-23-2078 32 5'UTR-5'UTR Intra-chr q13.33 q13.41 Seq+ 10150 ChimerSeq FusionScan TCGA_RNA-Seq WASF2-FGR WASF2 chr1 27816496 - FGR chr1 27951662 - Exonic hg19 OV TCGA-23-2078 10 5'UTR-5'UTR Intra-chr p36.11 p35.3 TK:Src Seq+ 10151 ChimerSeq FusionScan TCGA_RNA-Seq C19orf48-KLK7 C19orf48 chr19 51305473 - KLK7 chr19 51483180 - Exonic hg19 OV TCGA-23-2078 8 5'UTR-CDS Intra-chr q13.33 q13.41 Seq+ 10152 ChimerSeq FusionScan TCGA_RNA-Seq C19orf48-KLK7 C19orf48 chr19 51305473 - KLK7 chr19 51485713 - Exonic hg19 OV TCGA-23-2078 3 5'UTR-5'UTR Intra-chr q13.33 q13.41 Seq+ 10153 ChimerSeq FusionScan TCGA_RNA-Seq RIMS3-SCMH1 RIMS3 chr1 41131065 - SCMH1 chr1 41541123 - Exonic hg19 OV TCGA-23-2078 3 5'UTR-CDS Intra-chr p34.2 p34.2 Transcription factor Seq+ 10154 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPM-KDM4B HNRNPM chr19 8539128 + KDM4B chr19 5016267 + Exonic hg19 OV TCGA-23-2078 2 CDS-5'UTR Intra-chr p13.2 p13.3 Seq+ 10155 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-SSR3 TBL1XR1 chr3 176914908 - SSR3 chr3 156262228 - Exonic hg19 OV TCGA-23-2078 2 5'UTR-CDS Intra-chr q26.32 q25.31 10156 ChimerSeq FusionScan TCGA_RNA-Seq MECOM-LRRC34 MECOM chr3 169381123 - LRRC34 chr3 169526533 - Exonic hg19 OV TCGA-23-2078 2 In-Frame Intra-chr q26.2 Transcription factor q26.2 Seq+ 10157 ChimerSeq FusionScan TCGA_RNA-Seq MORC3-IL10RB MORC3 chr21 37711219 + IL10RB chr21 34655398 + Exonic hg19 OV TCGA-23-2078 2 Out-of-Frame Intra-chr q22.12 q22.11 Seq+ 10158 ChimerSeq FusionScan TCGA_RNA-Seq ILF2-GATAD2B ILF2 chr1 153642311 - GATAD2B chr1 153800824 - Exonic hg19 OV TCGA-23-2078 2 CDS-5'UTR Intra-chr q21.3 Transcription factor 10159 ChimerSeq FusionScan TCGA_RNA-Seq SORL1-TECTA SORL1 chr11 121403261 + TECTA chr11 121058540 + Exonic hg19 OV TCGA-23-2078 2 In-Frame Intra-chr q24.1 q23.3 Seq+ 10160 ChimerSeq FusionScan TCGA_RNA-Seq RPL4-KIAA0317 RPL4 chr15 66792393 - KIAA0317 chr14 75134297 - Exonic hg19 OV TCGA-23-2078 2 In-Frame Inter-chr q22.31 10161 ChimerSeq FusionScan TCGA_RNA-Seq NDUFS2-APOA2 NDUFS2 chr1 161183522 + APOA2 chr1 161193215 - Exonic hg19 OV TCGA-23-1111 12 CDS-5'UTR Intra-chr q23.3 q23.3 Seq+ 10162 ChimerSeq FusionScan TCGA_RNA-Seq SPECC1L-MKL1 SPECC1L chr22 24743144 + MKL1 chr22 40820385 - Exonic hg19 OV TCGA-23-1111 9 In-Frame Intra-chr q11.23 q13.2 Seq+ 10163 ChimerSeq FusionScan TCGA_RNA-Seq POC1A-TNNC1 POC1A chr3 52156394 - TNNC1 chr3 52486529 - Exonic hg19 OV TCGA-23-1111 6 In-Frame Intra-chr p21.2 p21.1 Seq+ 10164 ChimerSeq FusionScan TCGA_RNA-Seq PCBP2-TNFRSF1A PCBP2 chr12 53859757 + TNFRSF1A chr12 6443410 - Exonic hg19 OV TCGA-23-1111 6 In-Frame Intra-chr q13.13 p13.31 Seq+ 10165 ChimerSeq FusionScan TCGA_RNA-Seq PSMD3-ZPBP2 PSMD3 chr17 38142965 + ZPBP2 chr17 38026946 + Exonic hg19 OV TCGA-23-1111 5 Out-of-Frame Intra-chr q21.1 q21.1 Seq+ 10166 ChimerSeq FusionScan TCGA_RNA-Seq ZNF564-TNPO2 ZNF564 chr19 12662143 - TNPO2 chr19 12831804 - Exonic hg19 OV TCGA-23-1111 5 CDS-5'UTR Intra-chr p13.2 Transcription factor p13.13 Seq+ 10167 ChimerSeq FusionScan TCGA_RNA-Seq IKZF3-MIEN1 IKZF3 chr17 37944510 - MIEN1 chr17 37886544 - Exonic hg19 OV TCGA-23-1111 3 Out-of-Frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q12 10168 ChimerSeq FusionScan TCGA_RNA-Seq NSD1-ZNF346 NSD1 chr5 176639196 + ZNF346 chr5 176468126 + Exonic hg19 OV TCGA-23-1111 3 In-Frame Intra-chr q35.3 Oncogene q35.2 Transcription factor Seq+ 10169 ChimerSeq FusionScan TCGA_RNA-Seq EIF3C-AGAP3 EIF3C chr16 28725087 + AGAP3 chr7 150839249 + Exonic hg19 OV TCGA-23-1111 2 Out-of-Frame Inter-chr p11.2 q36.1 10170 ChimerSeq FusionScan TCGA_RNA-Seq PGAP3-MLPH PGAP3 chr17 37840849 - MLPH chr2 238455248 + Exonic hg19 OV TCGA-23-1111 2 In-Frame Inter-chr q12 Oncogene q37.3 10171 ChimerSeq FusionScan TCGA_RNA-Seq C10orf137-CASP7 C10orf137 chr10 127409981 + CASP7 chr10 115457252 + Exonic hg19 OV TCGA-04-1361 2 Out-of-Frame Intra-chr q25.3 10172 ChimerSeq FusionScan TCGA_RNA-Seq APH1B-MTCH2 APH1B chr15 63571530 + MTCH2 chr11 47647293 - Exonic hg19 OV TCGA-04-1361 2 Out-of-Frame Inter-chr q22.2 p11.2 10173 ChimerSeq FusionScan TCGA_RNA-Seq AHNAK-UBB AHNAK chr11 62314131 - UBB chr17 16285215 + Exonic hg19 OV TCGA-04-1361 2 5'UTR-5'UTR Inter-chr q12.3 Tumor suppressor gene p11.2 10174 ChimerSeq FusionScan TCGA_RNA-Seq SNHG12-ESRP1 SNHG12 chr1 28908101 - ESRP1 chr8 95690430 + Exonic hg19 OV TCGA-04-1361 2 3'UTR-CDS Inter-chr p35.3 q22.1 Tumor suppressor gene Seq+ 10175 ChimerSeq FusionScan TCGA_RNA-Seq SNHG12-ESRP1 SNHG12 chr1 28908101 - ESRP1 chr8 95686535 + Exonic hg19 OV TCGA-04-1361 2 3'UTR-CDS Inter-chr p35.3 q22.1 Tumor suppressor gene Seq+ 10176 ChimerSeq FusionScan TCGA_RNA-Seq GAPDH-MRPL51 GAPDH chr12 6643735 + MRPL51 chr12 6602138 - Exonic hg19 OV TCGA-04-1361 2 5'UTR-CDS Intra-chr p13.31 p13.31 10177 ChimerSeq FusionScan TCGA_RNA-Seq ATP6V1H-RB1CC1 ATP6V1H chr8 54745543 - RB1CC1 chr8 53543088 - Exonic hg19 OV TCGA-04-1361 2 In-Frame Intra-chr q11.23 q11.23 Tumor suppressor gene 10178 ChimerSeq FusionScan TCGA_RNA-Seq CSNK2A1-SNRPB CSNK2A1 chr20 524315 - SNRPB chr20 2448404 - Exonic hg19 OV TCGA-13-0727 12 5'UTR-CDS Intra-chr p13 Oncogene p13 Seq+ 10179 ChimerSeq FusionScan TCGA_RNA-Seq LINC00493-SEC23B LINC00493 chr20 18548240 + SEC23B chr20 18541294 + Exonic hg19 OV TCGA-13-0727 4 5'UTR-CDS Intra-chr p11.23 Seq+ 10180 ChimerSeq FusionScan TCGA_RNA-Seq IGSF9B-C9orf3 IGSF9B chr11 133800878 - C9orf3 chr9 97848963 + Exonic hg19 OV TCGA-13-0727 2 CDS-3'UTR Inter-chr q25 q22.32 10181 ChimerSeq FusionScan TCGA_RNA-Seq ZFAND1-RBPMS ZFAND1 chr8 82627038 - RBPMS chr8 30361802 + Exonic hg19 OV TCGA-13-0727 2 Out-of-Frame Intra-chr q21.13 p12 10182 ChimerSeq FusionScan TCGA_RNA-Seq MNF1-DYRK1B MNF1 chr6 33679325 - DYRK1B chr19 40317507 - Exonic hg19 OV TCGA-13-0727 2 In-Frame Inter-chr CMGC:DYRK 10183 ChimerSeq FusionScan TCGA_RNA-Seq RPS19-INTS10 RPS19 chr19 42365281 + INTS10 chr8 19703214 + Exonic hg19 OV TCGA-24-1923 2 In-Frame Inter-chr q13.2 p21.3 10184 ChimerSeq FusionScan TCGA_RNA-Seq SECISBP2-RIF1 SECISBP2 chr9 91934712 + RIF1 chr2 152315324 + Exonic hg19 OV TCGA-24-1923 2 In-Frame Inter-chr q22.2 q23.3 10185 ChimerSeq FusionScan TCGA_RNA-Seq FAM49A-WLS FAM49A chr2 16847047 - WLS chr1 68659910 - Exonic hg19 OV TCGA-24-1923 2 5'UTR-CDS Inter-chr p24.2 p31.3 10186 ChimerSeq FusionScan TCGA_RNA-Seq ZNF195-EEF1D ZNF195 chr11 3392204 - EEF1D chr8 144669022 - Exonic hg19 OV TCGA-24-1923 2 Out-of-Frame Inter-chr p15.4 Transcription factor 10187 ChimerSeq FusionScan TCGA_RNA-Seq NCDN-STARD10 NCDN chr1 36029510 + STARD10 chr11 72492339 - Exonic hg19 OV TCGA-13-1499 2 CDS-5'UTR Inter-chr p34.3 q13.4 10188 ChimerSeq FusionScan TCGA_RNA-Seq KLRG2-C4orf34 KLRG2 chr7 139164372 - C4orf34 chr4 39574083 - Exonic hg19 OV TCGA-13-1499 2 In-Frame Inter-chr q34 10189 ChimerSeq FusionScan TCGA_RNA-Seq TTYH2-APOO TTYH2 chr17 72227138 + APOO chrX 23858494 - Exonic hg19 OV TCGA-20-1687 5 In-Frame Inter-chr q25.1 p22.11 Seq+ 10190 ChimerSeq FusionScan TCGA_RNA-Seq GAPDH-CLDN3 GAPDH chr12 6643735 + CLDN3 chr7 73184600 - Exonic hg19 OV TCGA-20-1687 2 5'UTR-5'UTR Inter-chr p13.31 q11.23 10191 ChimerSeq FusionScan TCGA_RNA-Seq BCAT1-PRB3 BCAT1 chr12 24995015 - PRB3 chr12 11421602 - Exonic hg19 OV TCGA-25-1870 18 In-Frame Intra-chr p12.1 p13.2 Seq+ 10192 ChimerSeq FusionScan TCGA_RNA-Seq CD22-CADPS CD22 chr19 35820133 + CADPS chr3 62751659 - Exonic hg19 OV TCGA-25-1870 16 5'UTR-CDS Inter-chr q13.12 p14.2 Seq+ 10193 ChimerSeq FusionScan TCGA_RNA-Seq SOX5-FFAR2 SOX5 chr12 23818377 - FFAR2 chr19 35940616 + Exonic hg19 OV TCGA-25-1870 14 CDS-5'UTR Inter-chr p12.1 Transcription factor q13.12 Seq+ 10194 ChimerSeq FusionScan TCGA_RNA-Seq ABCC9-DMKN ABCC9 chr12 22028587 - DMKN chr19 35996888 - Exonic hg19 OV TCGA-25-1870 10 Out-of-Frame Inter-chr p12.1 q13.12 Seq+ 10195 ChimerSeq FusionScan TCGA_RNA-Seq EFCAB4B-SOX5 EFCAB4B chr12 3822402 - SOX5 chr12 23818498 - Exonic hg19 OV TCGA-25-1870 8 5'UTR-CDS Intra-chr p12.1 Transcription factor Seq+ 10196 ChimerSeq FusionScan TCGA_RNA-Seq GIPC1-UBL3 GIPC1 chr19 14602467 - UBL3 chr13 30351400 - Exonic hg19 OV TCGA-25-1870 7 5'UTR-CDS Inter-chr p13.12 q12.3 Seq+ 10197 ChimerSeq FusionScan TCGA_RNA-Seq CD22-CADPS CD22 chr19 35823827 + CADPS chr3 62751659 - Exonic hg19 OV TCGA-25-1870 5 Out-of-Frame Inter-chr q13.12 p14.2 Seq+ 10198 ChimerSeq FusionScan TCGA_RNA-Seq ELL-GRIN2B ELL chr19 18632730 - GRIN2B chr12 14019160 - Exonic hg19 OV TCGA-25-1870 3 CDS-5'UTR Inter-chr p13.11 p13.1 Seq+ 10199 ChimerSeq FusionScan TCGA_RNA-Seq FAM91A2-RNF115 FAM91A2 chr1 149577662 + RNF115 chr1 145682022 + Exonic hg19 OV TCGA-25-1870 2 5'UTR-CDS Intra-chr q21.1 10200 ChimerSeq FusionScan TCGA_RNA-Seq CCDC148-GCG CCDC148 chr2 159312926 - GCG chr2 163005697 - Exonic hg19 OV TCGA-24-1417 5 5'UTR-5'UTR Intra-chr q24.1 q24.2 Seq+ 10201 ChimerSeq FusionScan TCGA_RNA-Seq MTMR3-UBE2L3 MTMR3 chr22 30279348 + UBE2L3 chr22 21965145 + Exonic hg19 OV TCGA-24-1417 2 5'UTR-5'UTR Intra-chr q12.2 q11.21 10202 ChimerSeq FusionScan TCGA_RNA-Seq NAP1L4-CFTR NAP1L4 chr11 2972488 - CFTR chr7 117227792 + Exonic hg19 OV TCGA-24-1417 2 In-Frame Inter-chr q31.2 Tumor suppressor gene Seq+ 10203 ChimerSeq FusionScan TCGA_RNA-Seq SDK1-RBFOX1 SDK1 chr7 4119216 + RBFOX1 chr16 7102057 + Exonic hg19 OV TCGA-24-1417 2 CDS-5'UTR Inter-chr p22.2 p13.3 10204 ChimerSeq FusionScan TCGA_RNA-Seq KPNA6-C6orf48 KPNA6 chr1 32573735 + C6orf48 chr6 31803187 + Exonic hg19 OV TCGA-13-0913 11 CDS-3'UTR Inter-chr p35.2 Seq+ 10205 ChimerSeq FusionScan TCGA_RNA-Seq C9orf86-TMEM141 C9orf86 chr9 139702778 + TMEM141 chr9 139686702 + Exonic hg19 OV TCGA-13-0913 11 In-Frame Intra-chr q34.3 Seq+ 10206 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHA3-OSBPL6 PLEKHA3 chr2 179345636 + OSBPL6 chr2 179236852 + Exonic hg19 OV TCGA-13-0913 7 Out-of-Frame Intra-chr q31.2 q31.2 Seq+ 10207 ChimerSeq FusionScan TCGA_RNA-Seq CPSF1-ARHGAP39 CPSF1 chr8 145634398 - ARHGAP39 chr8 145781027 - Exonic hg19 OV TCGA-13-0913 3 Out-of-Frame Intra-chr q24.3 q24.3 Seq+ 10208 ChimerSeq FusionScan TCGA_RNA-Seq C9orf86-TMEM141 C9orf86 chr9 139702778 + TMEM141 chr9 139686398 + Exonic hg19 OV TCGA-13-0913 3 In-Frame Intra-chr q34.3 Seq+ 10209 ChimerSeq FusionScan TCGA_RNA-Seq SMEK2-FDX1 SMEK2 chr2 55842586 - FDX1 chr11 110327641 + Exonic hg19 OV TCGA-13-0913 2 Out-of-Frame Inter-chr q22.3 10210 ChimerSeq FusionScan TCGA_RNA-Seq CUEDC1-BRMS1 CUEDC1 chr17 55945510 - BRMS1 chr11 66106256 - Exonic hg19 OV TCGA-13-0913 2 Out-of-Frame Inter-chr q22 q13.2 Tumor suppressor gene 10211 ChimerSeq FusionScan TCGA_RNA-Seq TSNARE1-AK2 TSNARE1 chr8 143356141 - AK2 chr1 33476434 - Exonic hg19 OV TCGA-13-0913 2 Out-of-Frame Inter-chr q24.3 p35.1 10212 ChimerSeq FusionScan TCGA_RNA-Seq KRT7-EIF3C KRT7 chr12 52632559 + EIF3C chr16 28746751 + Exonic hg19 OV TCGA-13-0913 2 Out-of-Frame Inter-chr q13.13 p11.2 10213 ChimerSeq FusionScan TCGA_RNA-Seq PUM1-WDYHV1 PUM1 chr1 31538462 - WDYHV1 chr8 124440163 + Exonic hg19 OV TCGA-13-0913 2 5'UTR-CDS Inter-chr p35.2 q24.13 10214 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHA3-OSBPL6 PLEKHA3 chr2 179345636 + OSBPL6 chr2 179238616 + Exonic hg19 OV TCGA-13-0913 2 Out-of-Frame Intra-chr q31.2 q31.2 Seq+ 10215 ChimerSeq FusionScan TCGA_RNA-Seq U2AF2-POLR2E U2AF2 chr19 56172555 + POLR2E chr19 1089550 - Exonic hg19 OV TCGA-13-0913 2 In-Frame Intra-chr q13.42 p13.3 10216 ChimerSeq FusionScan TCGA_RNA-Seq ATG2A-KLK10 ATG2A chr11 64673034 - KLK10 chr19 51519412 - Exonic hg19 OV TCGA-13-0913 2 In-Frame Inter-chr q13.1 q13.41 Tumor suppressor gene 10217 ChimerSeq FusionScan TCGA_RNA-Seq TAF1C-TSTA3 TAF1C chr16 84215807 - TSTA3 chr8 144695465 - Exonic hg19 OV TCGA-13-0913 2 Out-of-Frame Inter-chr q24.1 10218 ChimerSeq FusionScan TCGA_RNA-Seq NARS2-GAB4 NARS2 chr11 78277177 - GAB4 chr22 17473066 - Exonic hg19 OV TCGA-25-1628 2 In-Frame Inter-chr q14.1 q11.1 10219 ChimerSeq FusionScan TCGA_RNA-Seq HSPA8-GRIK5 HSPA8 chr11 122932771 - GRIK5 chr19 42546907 - Exonic hg19 OV TCGA-20-1685 24 5'UTR-CDS Inter-chr q24.1 q13.2 Seq+ 10220 ChimerSeq FusionScan TCGA_RNA-Seq HSP90B1-TEX261 HSP90B1 chr12 104324342 + TEX261 chr2 71219113 - Exonic hg19 OV TCGA-20-1685 16 Out-of-Frame Inter-chr q23.3 Tumor suppressor gene p13.3 Seq+ 10221 ChimerSeq FusionScan TCGA_RNA-Seq MID1-SPAG17 MID1 chrX 10450519 - SPAG17 chr1 118598537 - Exonic hg19 OV TCGA-20-1685 5 In-Frame Inter-chr p22.2 p12 Seq+ 10222 ChimerSeq FusionScan TCGA_RNA-Seq HSP90B1-TEX261 HSP90B1 chr12 104324342 + TEX261 chr2 71216946 - Exonic hg19 OV TCGA-20-1685 5 In-Frame Inter-chr q23.3 Tumor suppressor gene p13.3 Seq+ 10223 ChimerSeq FusionScan TCGA_RNA-Seq POLR3H-ACO2 POLR3H chr22 41936702 - ACO2 chr22 41914484 + Exonic hg19 OV TCGA-20-1685 3 CDS-5'UTR Intra-chr q13.2 q13.2 Seq+ 10224 ChimerSeq FusionScan TCGA_RNA-Seq PML-AGBL3 PML chr15 74287282 + AGBL3 chr7 134819592 + Exonic hg19 OV TCGA-20-1685 2 Out-of-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q33 Seq+ 10225 ChimerSeq FusionScan TCGA_RNA-Seq TSPAN13-AHR TSPAN13 chr7 16793655 + AHR chr7 17349559 + Exonic hg19 OV TCGA-20-1685 2 Out-of-Frame Intra-chr p21.1 Tumor suppressor gene p21.1 Tumor suppressor gene Transcription factor 10226 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT6 NDUFA11 chr19 5896463 - FUT6 chr19 5832590 - Exonic hg19 OV TCGA-20-1685 2 CDS-5'UTR Intra-chr p13.3 p13.3 10227 ChimerSeq FusionScan TCGA_RNA-Seq SERPINH1-RYBP SERPINH1 chr11 75273364 + RYBP chr3 72495774 - Exonic hg19 OV TCGA-20-1685 2 5'UTR-5'UTR Inter-chr q13.5 10228 ChimerSeq FusionScan TCGA_RNA-Seq FBXO31-TTC28 FBXO31 chr16 87393900 - TTC28 chr22 28559587 - Exonic hg19 OV TCGA-61-2104 2 Out-of-Frame Inter-chr q24.2 Tumor suppressor gene q12.1 Seq+ 10229 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC17-SERINC2 ZCCHC17 chr1 31821821 + SERINC2 chr1 31883231 + Exonic hg19 OV TCGA-61-2104 2 In-Frame Intra-chr p35.2 p35.2 10230 ChimerSeq FusionScan TCGA_RNA-Seq MACROD1-TBC1D22A MACROD1 chr11 63918710 - TBC1D22A chr22 47274548 + Exonic hg19 OV TCGA-61-2104 2 In-Frame Inter-chr q13.1 q13.31 Seq+ 10231 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-MIPEP TBL1XR1 chr3 176914908 - MIPEP chr13 24330757 - Exonic hg19 OV TCGA-31-1959 15 5'UTR-CDS Inter-chr q26.32 q12.12 Seq+ 10232 ChimerSeq FusionScan TCGA_RNA-Seq DICER1-UVRAG DICER1 chr14 95623566 - UVRAG chr11 75826967 + Exonic hg19 OV TCGA-31-1959 3 5'UTR-CDS Inter-chr q32.13 Oncogene Tumor suppressor gene q13.5 Tumor suppressor gene Seq+ 10233 ChimerSeq FusionScan TCGA_RNA-Seq NFKBID-TYROBP NFKBID chr19 36386881 - TYROBP chr19 36395536 - Exonic hg19 OV TCGA-31-1959 2 In-Frame Intra-chr q13.12 q13.12 Seq+ 10234 ChimerSeq FusionScan TCGA_RNA-Seq LCOR-SLAIN2 LCOR chr10 98711953 + SLAIN2 chr4 48422141 + Exonic hg19 OV TCGA-31-1959 2 Out-of-Frame Inter-chr q24.1 Transcription factor p11 10235 ChimerSeq FusionScan TCGA_RNA-Seq USP6NL-AHCY USP6NL chr10 11639629 - AHCY chr20 32883391 - Exonic hg19 OV TCGA-29-1778 7 In-Frame Inter-chr p14 q11.22 Seq+ 10236 ChimerSeq FusionScan TCGA_RNA-Seq EPG5-RAB38 EPG5 chr18 43467715 - RAB38 chr11 87847308 - Exonic hg19 OV TCGA-29-1778 6 In-Frame Inter-chr q21.1 q14.2 Seq+ 10237 ChimerSeq FusionScan TCGA_RNA-Seq GTPBP2-VEGFA GTPBP2 chr6 43592246 - VEGFA chr6 43752277 + Exonic hg19 OV TCGA-29-1778 6 In-Frame Intra-chr p21.1 p21.1 Tumor suppressor gene Seq+ 10238 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB20-RERE ZBTB20 chr3 114619150 - RERE chr1 8674745 - Exonic hg19 OV TCGA-29-1778 5 5'UTR-CDS Inter-chr q13.31 Transcription factor p36.23 Seq+ 10239 ChimerSeq FusionScan TCGA_RNA-Seq SPRED3-RFXANK SPRED3 chr19 38885116 + RFXANK chr19 19304747 + Exonic hg19 OV TCGA-29-1778 4 3'UTR-5'UTR Intra-chr q13.2 p13.11 10240 ChimerSeq FusionScan TCGA_RNA-Seq CAP1-NARS2 CAP1 chr1 40525842 + NARS2 chr11 78154804 - Exonic hg19 OV TCGA-29-1778 3 In-Frame Inter-chr p34.2 q14.1 Seq+ 10241 ChimerSeq FusionScan TCGA_RNA-Seq EPG5-RAB38 EPG5 chr18 43479368 - RAB38 chr11 87847308 - Exonic hg19 OV TCGA-29-1778 2 In-Frame Inter-chr q21.1 q14.2 Seq+ 10242 ChimerSeq FusionScan TCGA_RNA-Seq RERE-MFSD2A RERE chr1 8482786 - MFSD2A chr1 40422758 + Exonic hg19 OV TCGA-29-1778 2 In-Frame Intra-chr p36.23 p34.2 Tumor suppressor gene 10243 ChimerSeq FusionScan TCGA_RNA-Seq ACVR1-NFATC1 ACVR1 chr2 158674896 - NFATC1 chr18 77246247 + Exonic hg19 OV TCGA-24-2281 4 5'UTR-CDS Inter-chr q24.1 q23 Transcription factor Seq+ 10244 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-TBCA RCC1 chr1 28834672 + TBCA chr5 77004172 - Exonic hg19 OV TCGA-04-1343 2 5'UTR-CDS Inter-chr p35.3 q14.1 10245 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 OV TCGA-04-1343 2 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 10246 ChimerSeq FusionScan TCGA_RNA-Seq PSAP-HNRNPK PSAP chr10 73578373 - HNRNPK chr9 86593367 - Exonic hg19 OV TCGA-04-1343 2 CDS-5'UTR Inter-chr q22.1 q21.32 10247 ChimerSeq FusionScan TCGA_RNA-Seq UCKL1-NOC4L UCKL1 chr20 62587612 - NOC4L chr12 132635525 + Exonic hg19 OV TCGA-04-1343 2 Out-of-Frame Inter-chr q13.33 q24.33 10248 ChimerSeq FusionScan TCGA_RNA-Seq PAFAH1B1-SMYD4 PAFAH1B1 chr17 2497300 + SMYD4 chr17 1731300 - Exonic hg19 OV TCGA-29-1702 6 5'UTR-5'UTR Intra-chr p13.3 Tumor suppressor gene p13.3 Tumor suppressor gene Seq+ 10249 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1L1-MUCL1 WHSC1L1 chr8 38239316 - MUCL1 chr12 55250553 + Exonic hg19 OV TCGA-29-1702 4 5'UTR-CDS Inter-chr p11.23 Tumor suppressor gene q13.2 Seq+ 10250 ChimerSeq FusionScan TCGA_RNA-Seq ZDHHC17-ANO4 ZDHHC17 chr12 77158109 + ANO4 chr12 101295423 + Exonic hg19 OV TCGA-29-1702 4 CDS-5'UTR Intra-chr q21.2 q23.1 Seq+ 10251 ChimerSeq FusionScan TCGA_RNA-Seq CHP-SMAD3 CHP chr15 41555081 + SMAD3 chr15 67482750 + Exonic hg19 OV TCGA-29-1702 4 Out-of-Frame Intra-chr q22.33 Transcription factor 10252 ChimerSeq FusionScan TCGA_RNA-Seq DDX54-CHST11 DDX54 chr12 113607574 - CHST11 chr12 105150726 + Exonic hg19 OV TCGA-29-1702 3 Out-of-Frame Intra-chr q24.13 q23.3 10253 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1L1-MUCL1 WHSC1L1 chr8 38239316 - MUCL1 chr12 55248899 + Exonic hg19 OV TCGA-29-1702 3 5'UTR-CDS Inter-chr p11.23 Tumor suppressor gene q13.2 Seq+ 10254 ChimerSeq FusionScan TCGA_RNA-Seq GTF2H3-EIF2B1 GTF2H3 chr12 124118419 + EIF2B1 chr12 124115080 - Exonic hg19 OV TCGA-29-1702 3 In-Frame Intra-chr q24.31 q24.31 Seq+ 10255 ChimerSeq FusionScan TCGA_RNA-Seq STAU2-PAWR STAU2 chr8 74650518 - PAWR chr12 80014987 - Exonic hg19 OV TCGA-29-1702 2 In-Frame Inter-chr q21.11 q21.2 Tumor suppressor gene Seq+ 10256 ChimerSeq FusionScan TCGA_RNA-Seq RPL23-TCOF1 RPL23 chr17 37006320 - TCOF1 chr5 149777916 + Exonic hg19 OV TCGA-23-1023 2 3'UTR-CDS Inter-chr q12 q32 10257 ChimerSeq FusionScan TCGA_RNA-Seq MYO10-MAST1 MYO10 chr5 16685846 - MAST1 chr19 12969175 + Exonic hg19 OV TCGA-23-1023 2 In-Frame Inter-chr p15.1 p13.13 AGC:MAST 10258 ChimerSeq FusionScan TCGA_RNA-Seq MPI-ESYT1 MPI chr15 75185143 + ESYT1 chr12 56537606 + Exonic hg19 OV TCGA-23-1023 2 Out-of-Frame Inter-chr q24.1 q13.2 10259 ChimerSeq FusionScan TCGA_RNA-Seq HPS1-PAX8 HPS1 chr10 100205056 - PAX8 chr2 113977755 - Exonic hg19 OV TCGA-23-1023 2 5'UTR-CDS Inter-chr q24.2 q14.1 Oncogene Transcription factor 10260 ChimerSeq FusionScan TCGA_RNA-Seq FXR1-TTC14 FXR1 chr3 180630524 + TTC14 chr3 180320678 + Exonic hg19 OV TCGA-24-1550 17 Out-of-Frame Intra-chr q26.33 q26.33 Seq+ 10261 ChimerSeq FusionScan TCGA_RNA-Seq NFYC-CAP1 NFYC chr1 41157539 + CAP1 chr1 40525008 + Exonic hg19 OV TCGA-24-1550 10 5'UTR-5'UTR Intra-chr p34.2 Transcription factor p34.2 Seq+ 10262 ChimerSeq FusionScan TCGA_RNA-Seq CLSTN1-SPA17 CLSTN1 chr1 9883700 - SPA17 chr11 124561591 + Exonic hg19 OV TCGA-24-1550 7 Out-of-Frame Inter-chr p36.22 q24.2 Seq+ 10263 ChimerSeq FusionScan TCGA_RNA-Seq ATP8A2-CRYL1 ATP8A2 chr13 26436546 + CRYL1 chr13 20987526 - Exonic hg19 OV TCGA-24-1550 2 In-Frame Intra-chr q12.13 q12.11 Seq+ 10264 ChimerSeq FusionScan TCGA_RNA-Seq ANO7-C7orf50 ANO7 chr2 242157796 + C7orf50 chr7 1167022 - Exonic hg19 OV TCGA-24-1550 2 CDS-5'UTR Inter-chr q37.3 p22.3 10265 ChimerSeq FusionScan TCGA_RNA-Seq WFDC8-PMEPA1 WFDC8 chr20 44180661 - PMEPA1 chr20 56234753 - Exonic hg19 OV TCGA-24-1550 2 3'UTR-CDS Intra-chr q13.12 q13.31 10266 ChimerSeq FusionScan TCGA_RNA-Seq STRBP-ZBTB26 STRBP chr9 125895123 - ZBTB26 chr9 125682223 - Exonic hg19 OV TCGA-24-1550 2 CDS-5'UTR Intra-chr q33.3 q33.2 Transcription factor 10267 ChimerSeq FusionScan TCGA_RNA-Seq ASB4-UBTF ASB4 chr7 95115470 + UBTF chr17 42295664 - Exonic hg19 OV TCGA-24-1550 2 CDS-5'UTR Inter-chr q21.3 q21.31 10268 ChimerSeq FusionScan TCGA_RNA-Seq NPEPPS-NDUFAF2 NPEPPS chr17 45646860 + NDUFAF2 chr5 60368951 + Exonic hg19 OV TCGA-20-1683 14 In-Frame Inter-chr q21.32 q12.1 Seq+ 10269 ChimerSeq FusionScan TCGA_RNA-Seq FCHSD2-FAM168A FCHSD2 chr11 72851075 - FAM168A chr11 73122581 - Exonic hg19 OV TCGA-20-1683 13 Out-of-Frame Intra-chr q13.4 q13.4 Seq+ 10270 ChimerSeq FusionScan TCGA_RNA-Seq SCAP-SMARCC1 SCAP chr3 47484361 - SMARCC1 chr3 47779600 - Exonic hg19 OV TCGA-20-1683 5 In-Frame Intra-chr p21.31 p21.31 Tumor suppressor gene Seq+ 10271 ChimerSeq FusionScan TCGA_RNA-Seq FCGRT-PRMT1 FCGRT chr19 50017743 + PRMT1 chr19 50183743 + Exonic hg19 OV TCGA-20-1683 3 Out-of-Frame Intra-chr q13.33 q13.33 Seq+ 10272 ChimerSeq FusionScan TCGA_RNA-Seq VOPP1-PPHLN1 VOPP1 chr7 55639963 - PPHLN1 chr12 42768664 + Exonic hg19 OV TCGA-20-1683 2 Out-of-Frame Inter-chr p11.2 q12 10273 ChimerSeq FusionScan TCGA_RNA-Seq P2RY6-ARHGEF17 P2RY6 chr11 72975694 + ARHGEF17 chr11 73057927 + Exonic hg19 OV TCGA-20-1683 2 5'UTR-CDS Intra-chr q13.4 q13.4 10274 ChimerSeq FusionScan TCGA_RNA-Seq NADK-KIAA1751 NADK chr1 1709727 - KIAA1751 chr1 1903521 - Exonic hg19 OV TCGA-20-1683 2 5'UTR-CDS Intra-chr p36.33 10275 ChimerSeq FusionScan TCGA_RNA-Seq DDX5-EHMT1 DDX5 chr17 62502193 - EHMT1 chr9 140728800 + Exonic hg19 OV TCGA-20-1683 2 Out-of-Frame Inter-chr q23.3 q34.3 10276 ChimerSeq FusionScan TCGA_RNA-Seq BAG4-ZNF672 BAG4 chr8 38050313 + ZNF672 chr1 249138681 + Exonic hg19 OV TCGA-20-1683 2 CDS-5'UTR Inter-chr p11.23 q44 Transcription factor Seq+ 10277 ChimerSeq FusionScan TCGA_RNA-Seq KLHDC10-TGIF1 KLHDC10 chr7 129710649 + TGIF1 chr18 3456351 + Exonic hg19 OV TCGA-20-1683 2 In-Frame Inter-chr q32.2 p11.31 Transcription factor 10278 ChimerSeq FusionScan TCGA_RNA-Seq FBXO46-ZNF574 FBXO46 chr19 46234106 - ZNF574 chr19 42582738 + Exonic hg19 OV TCGA-20-1683 2 5'UTR-5'UTR Intra-chr q13.32 q13.2 Transcription factor 10279 ChimerSeq FusionScan TCGA_RNA-Seq EIF2C2-TRAPPC9 EIF2C2 chr8 141595217 - TRAPPC9 chr8 141301177 - Exonic hg19 OV TCGA-29-1705 8 Out-of-Frame Intra-chr q24.3 10280 ChimerSeq FusionScan TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61612310 - ANK3 chr10 62039397 - Exonic hg19 OV TCGA-29-1705 4 In-Frame Intra-chr q21.2 q21.2 Seq+ 10281 ChimerSeq FusionScan TCGA_RNA-Seq ALDOA-COL1A1 ALDOA chr16 30077248 + COL1A1 chr17 48275865 - Exonic hg19 OV TCGA-29-1705 2 5'UTR-CDS Inter-chr p11.2 q21.33 Oncogene Seq+ 10282 ChimerSeq FusionScan TCGA_RNA-Seq CDR2L-C17orf28 CDR2L chr17 72984217 + C17orf28 chr17 72960727 - Exonic hg19 OV TCGA-09-0364 14 Out-of-Frame Intra-chr q25.1 Seq+ 10283 ChimerSeq FusionScan TCGA_RNA-Seq RBFOX3-DCDC2 RBFOX3 chr17 77303805 - DCDC2 chr6 24358075 - Exonic hg19 OV TCGA-09-0364 2 5'UTR-5'UTR Inter-chr q25.3 p22.3 Tumor suppressor gene 10284 ChimerSeq FusionScan TCGA_RNA-Seq RRBP1-YWHAE RRBP1 chr20 17662672 - YWHAE chr17 1268352 - Exonic hg19 OV TCGA-24-2020 11 5'UTR-CDS Inter-chr p12.1 p13.3 Seq+ 10285 ChimerSeq FusionScan TCGA_RNA-Seq KLF6-CREM KLF6 chr10 3827104 - CREM chr10 35437295 + Exonic hg19 OV TCGA-24-2020 8 Out-of-Frame Intra-chr p15.2 Oncogene Tumor suppressor gene Transcription factor p11.21 Tumor suppressor gene Transcription factor Seq+ 10286 ChimerSeq FusionScan TCGA_RNA-Seq SNTB1-FGGY SNTB1 chr8 121823512 - FGGY chr1 60019795 + Exonic hg19 OV TCGA-24-2020 5 In-Frame Inter-chr q24.12 p32.1 Seq+ 10287 ChimerSeq FusionScan TCGA_RNA-Seq RMND5A-ANAPC1 RMND5A chr2 86947932 + ANAPC1 chr2 112638426 - Exonic hg19 OV TCGA-24-2020 4 CDS-5'UTR Intra-chr p11.2 q13 Tumor suppressor gene 10288 ChimerSeq FusionScan TCGA_RNA-Seq RRBP1-YWHAE RRBP1 chr20 17660643 - YWHAE chr17 1268352 - Exonic hg19 OV TCGA-24-2020 4 5'UTR-CDS Inter-chr p12.1 p13.3 Seq+ 10289 ChimerSeq FusionScan TCGA_RNA-Seq CTBP2-KCNMA1 CTBP2 chr10 126848887 - KCNMA1 chr10 79011014 - Exonic hg19 OV TCGA-24-2020 3 5'UTR-CDS Intra-chr q26.13 q22.3 Seq+ 10290 ChimerSeq FusionScan TCGA_RNA-Seq RRBP1-YWHAE RRBP1 chr20 17660643 - YWHAE chr17 1273035 - Exonic hg19 OV TCGA-24-2020 3 5'UTR-3'UTR Inter-chr p12.1 p13.3 Seq+ 10291 ChimerSeq FusionScan TCGA_RNA-Seq RAMP1-GAS5 RAMP1 chr2 238786004 + GAS5 chr1 173833442 - Exonic hg19 OV TCGA-24-2020 2 CDS-3'UTR Inter-chr q37.3 q25.1 Tumor suppressor gene 10292 ChimerSeq FusionScan TCGA_RNA-Seq BDKRB2-PHF10 BDKRB2 chr14 96671296 + PHF10 chr6 170121207 - Exonic hg19 OV TCGA-24-2020 2 5'UTR-CDS Inter-chr q32.2 q27 10293 ChimerSeq FusionScan TCGA_RNA-Seq ABCC4-UPF3A ABCC4 chr13 95899228 - UPF3A chr13 115070263 + Exonic hg19 OV TCGA-24-2020 2 In-Frame Intra-chr q32.1 q34 10294 ChimerSeq FusionScan TCGA_RNA-Seq SIK2-ZNF131 SIK2 chr11 111491126 + ZNF131 chr5 43122140 + Exonic hg19 OV TCGA-24-2020 2 CDS-5'UTR Inter-chr q23.1 p12 Transcription factor 10295 ChimerSeq FusionScan TCGA_RNA-Seq RRBP1-BFSP1 RRBP1 chr20 17660643 - BFSP1 chr20 17505553 - Exonic hg19 OV TCGA-24-2020 2 5'UTR-CDS Intra-chr p12.1 p12.1 Seq+ 10296 ChimerSeq FusionScan TCGA_RNA-Seq PLCXD1-GOLPH3 PLCXD1 chrY 148351 + GOLPH3 chr5 32143986 - Exonic hg19 OV TCGA-24-2020 2 5'UTR-CDS Inter-chr p22.33 p13.3 10297 ChimerSeq FusionScan TCGA_RNA-Seq SDSL-OAS2 SDSL chr12 113874680 + OAS2 chr12 113424842 + Exonic hg19 OV TCGA-24-2020 2 Out-of-Frame Intra-chr q24.13 q24.13 10298 ChimerSeq FusionScan TCGA_RNA-Seq DOK4-PLLP DOK4 chr16 57513353 - PLLP chr16 57295982 - Exonic hg19 OV TCGA-25-1871 6 In-Frame Intra-chr q21 q13 Seq+ 10299 ChimerSeq FusionScan TCGA_RNA-Seq MAP4-TXNRD3 MAP4 chr3 48130262 - TXNRD3 chr3 126366139 - Exonic hg19 OV TCGA-25-1871 2 5'UTR-CDS Intra-chr p21.31 q21.3 10300 ChimerSeq FusionScan TCGA_RNA-Seq NUP62-ATF5 NUP62 chr19 50432582 - ATF5 chr19 50435678 + Exonic hg19 OV TCGA-25-1871 2 5'UTR-CDS Intra-chr q13.33 q13.33 Transcription factor Seq+ 10301 ChimerSeq FusionScan TCGA_RNA-Seq ACADS-GTPBP10 ACADS chr12 121174938 + GTPBP10 chr7 89982129 + Exonic hg19 OV TCGA-25-2401 4 In-Frame Inter-chr q24.31 q21.13 Seq+ 10302 ChimerSeq FusionScan TCGA_RNA-Seq CCDC149-C9orf3 CCDC149 chr4 24878157 - C9orf3 chr9 97822975 + Exonic hg19 OV TCGA-25-2401 4 In-Frame Inter-chr p15.2 q22.32 Seq+ 10303 ChimerSeq FusionScan TCGA_RNA-Seq ITGB3-MYL4 ITGB3 chr17 45331306 + MYL4 chr17 45286754 + Exonic hg19 OV TCGA-25-2401 3 CDS-5'UTR Intra-chr q21.32 Oncogene Tumor suppressor gene q21.32 Seq+ 10304 ChimerSeq FusionScan TCGA_RNA-Seq NR1H2-MYH14 NR1H2 chr19 50885431 + MYH14 chr19 50792692 + Exonic hg19 OV TCGA-25-2401 3 In-Frame Intra-chr q13.33 Transcription factor q13.33 Seq+ 10305 ChimerSeq FusionScan TCGA_RNA-Seq SPRED3-RFXANK SPRED3 chr19 38885116 + RFXANK chr19 19304747 + Exonic hg19 OV TCGA-25-2401 2 3'UTR-5'UTR Intra-chr q13.2 p13.11 10306 ChimerSeq FusionScan TCGA_RNA-Seq COL12A1-SYTL2 COL12A1 chr6 75912435 - SYTL2 chr11 85429886 - Exonic hg19 OV TCGA-25-2401 2 In-Frame Inter-chr q14.1 q14.1 10307 ChimerSeq FusionScan TCGA_RNA-Seq ERBB4-DIRC3 ERBB4 chr2 213403172 - DIRC3 chr2 218192875 - Exonic hg19 OV TCGA-13-0891 4 CDS-3'UTR Intra-chr q34 Oncogene Tumor suppressor gene q35 Seq+ 10308 ChimerSeq FusionScan TCGA_RNA-Seq JMJD1C-CTNNA3 JMJD1C chr10 65024410 - CTNNA3 chr10 68979628 - Exonic hg19 OV TCGA-13-0891 3 In-Frame Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 10309 ChimerSeq FusionScan TCGA_RNA-Seq VGLL4-MKRN2 VGLL4 chr3 11744444 - MKRN2 chr3 12623306 + Exonic hg19 OV TCGA-13-0891 2 Out-of-Frame Intra-chr p25.2 p25.2 Seq+ 10310 ChimerSeq FusionScan TCGA_RNA-Seq PRDX2-BLVRB PRDX2 chr19 12910672 - BLVRB chr19 40957399 - Exonic hg19 OV TCGA-13-0891 2 In-Frame Intra-chr p13.13 q13.2 10311 ChimerSeq FusionScan TCGA_RNA-Seq KAT6B-ADK KAT6B chr10 76603236 + ADK chr10 76468078 + Exonic hg19 OV TCGA-13-0762 4 Out-of-Frame Intra-chr Oncogene q22.2 Seq+ 10312 ChimerSeq FusionScan TCGA_RNA-Seq IRF3-BCL2L12 IRF3 chr19 50163969 - BCL2L12 chr19 50169941 + Exonic hg19 OV TCGA-13-0762 4 In-Frame Intra-chr q13.33 Tumor suppressor gene Transcription factor q13.33 Seq+ 10313 ChimerSeq FusionScan TCGA_RNA-Seq SPRED3-RFXANK SPRED3 chr19 38885116 + RFXANK chr19 19304747 + Exonic hg19 OV TCGA-13-0762 3 3'UTR-5'UTR Intra-chr q13.2 p13.11 10314 ChimerSeq FusionScan TCGA_RNA-Seq COL9A2-EWSR1 COL9A2 chr1 40777730 - EWSR1 chr22 29694722 + Exonic hg19 OV TCGA-13-0762 3 Out-of-Frame Inter-chr p34.2 q12.2 10315 ChimerSeq FusionScan TCGA_RNA-Seq MFGE8-CRTC1 MFGE8 chr15 89444781 - CRTC1 chr19 18882251 + Exonic hg19 OV TCGA-13-0762 3 In-Frame Inter-chr q26.1 p13.11 Oncogene 10316 ChimerSeq FusionScan TCGA_RNA-Seq FLAD1-PHYHD1 FLAD1 chr1 154956542 + PHYHD1 chr9 131696060 + Exonic hg19 OV TCGA-13-0762 2 In-Frame Inter-chr q21.3 q34.11 10317 ChimerSeq FusionScan TCGA_RNA-Seq ABHD8-FLAD1 ABHD8 chr19 17411664 - FLAD1 chr1 154960580 + Exonic hg19 OV TCGA-13-0762 2 Out-of-Frame Inter-chr p13.11 q21.3 10318 ChimerSeq FusionScan TCGA_RNA-Seq OSBPL1A-EIF3E OSBPL1A chr18 21851585 - EIF3E chr8 109215732 - Exonic hg19 OV TCGA-13-0762 2 5'UTR-CDS Inter-chr q11.2 q23.1 10319 ChimerSeq FusionScan TCGA_RNA-Seq DNMT3A-BAG6 DNMT3A chr2 25467023 - BAG6 chr6 31619553 - Exonic hg19 OV TCGA-13-0762 2 CDS-5'UTR Inter-chr p23.3 Oncogene Tumor suppressor gene p21.33 10320 ChimerSeq FusionScan TCGA_RNA-Seq TXNDC9-EIF5B TXNDC9 chr2 99938417 - EIF5B chr2 99976698 + Exonic hg19 OV TCGA-13-0762 2 In-Frame Intra-chr q11.2 q11.2 10321 ChimerSeq FusionScan TCGA_RNA-Seq FAT1-BEND7 FAT1 chr4 187584452 - BEND7 chr10 13534876 - Exonic hg19 OV TCGA-25-2393 2 In-Frame Inter-chr q35.2 Tumor suppressor gene p13 10322 ChimerSeq FusionScan TCGA_RNA-Seq GFOD2-C16orf48 GFOD2 chr16 67753065 - C16orf48 chr16 67697459 - Exonic hg19 OV TCGA-25-2393 2 5'UTR-CDS Intra-chr q22.1 10323 ChimerSeq FusionScan TCGA_RNA-Seq NXF1-MFF NXF1 chr11 62563537 - MFF chr2 228193393 + Exonic hg19 OV TCGA-25-2393 2 CDS-5'UTR Inter-chr q12.3 q36.3 10324 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-C1orf189 RCC1 chr1 28832596 + C1orf189 chr1 154178114 - Exonic hg19 OV TCGA-25-2393 2 5'UTR-CDS Intra-chr p35.3 q21.3 10325 ChimerSeq FusionScan TCGA_RNA-Seq NCK1-IL20RB NCK1 chr3 136647069 + IL20RB chr3 136699307 + Exonic hg19 OV TCGA-25-2393 2 In-Frame Intra-chr q22.3 q22.3 Seq+ 10326 ChimerSeq FusionScan TCGA_RNA-Seq HMGA2-HNRNPM HMGA2 chr12 66221867 + HNRNPM chr19 8520288 + Exonic hg19 OV TCGA-25-2393 2 Out-of-Frame Inter-chr q14.3 Transcription factor p13.2 Seq+ 10327 ChimerSeq FusionScan TCGA_RNA-Seq TLK1-POLR2I TLK1 chr2 171974248 - POLR2I chr19 36605615 - Exonic hg19 OV TCGA-25-2393 2 Out-of-Frame Inter-chr q31.1 Other:TLK q13.12 10328 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-EHBP1L1 RCC1 chr1 28835413 + EHBP1L1 chr11 65359270 + Exonic hg19 OV TCGA-25-2393 2 5'UTR-CDS Inter-chr p35.3 q13.1 10329 ChimerSeq FusionScan TCGA_RNA-Seq EXOC4-TRUB2 EXOC4 chr7 133164892 + TRUB2 chr9 131079505 - Exonic hg19 OV TCGA-09-2045 3 In-Frame Inter-chr q33 q34.11 Seq+ 10330 ChimerSeq FusionScan TCGA_RNA-Seq TMX2-ILF3 TMX2 chr11 57505140 + ILF3 chr19 10799225 + Exonic hg19 OV TCGA-09-2045 2 In-Frame Inter-chr q12.1 p13.2 10331 ChimerSeq FusionScan TCGA_RNA-Seq P4HB-STRA13 P4HB chr17 79813017 - STRA13 chr17 79977785 - Exonic hg19 OV TCGA-09-2045 2 In-Frame Intra-chr q25.3 10332 ChimerSeq FusionScan TCGA_RNA-Seq LCN2-LMX1B LCN2 chr9 130915405 + LMX1B chr9 129458117 + Exonic hg19 OV TCGA-09-2045 2 3'UTR-CDS Intra-chr q34.11 q33.3 Transcription factor Seq+ 10333 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152498705 + Exonic hg19 OV TCGA-09-2045 2 In-Frame Intra-chr q36.1 Seq+ 10334 ChimerSeq FusionScan TCGA_RNA-Seq TRA2A-IGF2BP3 TRA2A chr7 23545364 - IGF2BP3 chr7 23401360 - Exonic hg19 OV TCGA-25-1318 2 Out-of-Frame Intra-chr p15.3 p15.3 10335 ChimerSeq FusionScan TCGA_RNA-Seq B4GALT5-SPATA2 B4GALT5 chr20 48257014 - SPATA2 chr20 48525129 - Exonic hg19 OV TCGA-25-1318 2 CDS-5'UTR Intra-chr q13.13 q13.13 Seq+ 10336 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT6 NDUFA11 chr19 5896463 - FUT6 chr19 5832590 - Exonic hg19 OV TCGA-10-0937 3 CDS-5'UTR Intra-chr p13.3 p13.3 10337 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPF-ZNF569 HNRNPF chr10 43904578 - ZNF569 chr19 37956375 - Exonic hg19 OV TCGA-13-0916 2 5'UTR-5'UTR Inter-chr q11.21 q13.12 Transcription factor Seq+ 10338 ChimerSeq FusionScan TCGA_RNA-Seq CIAO1-TMEM127 CIAO1 chr2 96932227 + TMEM127 chr2 96920735 - Exonic hg19 OV TCGA-WR-A838 16 In-Frame Intra-chr q11.2 q11.2 Tumor suppressor gene Seq+ 10339 ChimerSeq FusionScan TCGA_RNA-Seq PAFAH1B1-VPS53 PAFAH1B1 chr17 2541614 + VPS53 chr17 505136 - Exonic hg19 OV TCGA-61-2012 6 Out-of-Frame Intra-chr p13.3 Tumor suppressor gene Tumor suppressor gene Seq+ 10340 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 OV TCGA-61-2012 2 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 10341 ChimerSeq FusionScan TCGA_RNA-Seq ABR-SMG6 ABR chr17 953289 - SMG6 chr17 1989195 - Exonic hg19 OV TCGA-61-2012 2 In-Frame Intra-chr p13.3 p13.3 10342 ChimerSeq FusionScan TCGA_RNA-Seq PDE4D-DEPDC1B PDE4D chr5 59481383 - DEPDC1B chr5 59943360 - Exonic hg19 OV TCGA-61-2012 2 Out-of-Frame Intra-chr q12.1 q12.1 Seq+ 10343 ChimerSeq FusionScan TCGA_RNA-Seq PRMT1-CCDC155 PRMT1 chr19 50185516 + CCDC155 chr19 49910142 + Exonic hg19 OV TCGA-61-2012 2 Out-of-Frame Intra-chr q13.33 q13.33 Seq+ 10344 ChimerSeq FusionScan TCGA_RNA-Seq TANC1-PKP4 TANC1 chr2 160055564 + PKP4 chr2 159389691 + Exonic hg19 OV TCGA-36-1568 9 CDS-5'UTR Intra-chr q24.2 q24.1 Seq+ 10345 ChimerSeq FusionScan TCGA_RNA-Seq TANC1-PKP4 TANC1 chr2 159922483 + PKP4 chr2 159389691 + Exonic hg19 OV TCGA-36-1568 3 CDS-5'UTR Intra-chr q24.2 q24.1 Seq+ 10346 ChimerSeq FusionScan TCGA_RNA-Seq MARK4-CKM MARK4 chr19 45754897 + CKM chr19 45810908 - Exonic hg19 OV TCGA-36-1568 2 In-Frame Intra-chr q13.32 CAMK:CAMKL Oncogene q13.32 Seq+ 10347 ChimerSeq FusionScan TCGA_RNA-Seq STAU2-MAVS STAU2 chr8 74659017 - MAVS chr20 3835204 + Exonic hg19 OV TCGA-36-1568 2 5'UTR-5'UTR Inter-chr q21.11 p13 10348 ChimerSeq FusionScan TCGA_RNA-Seq BNIP3-ABI1 BNIP3 chr10 133784141 - ABI1 chr10 27054247 - Exonic hg19 OV TCGA-36-1568 2 In-Frame Intra-chr q26.3 p12.1 10349 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-FAM192A RCC1 chr1 28834672 + FAM192A chr16 57207781 - Exonic hg19 OV TCGA-36-1568 2 5'UTR-5'UTR Inter-chr p35.3 q13 10350 ChimerSeq FusionScan TCGA_RNA-Seq SPPL3-C12orf43 SPPL3 chr12 121341647 - C12orf43 chr12 121448949 - Exonic hg19 OV TCGA-36-1568 2 Out-of-Frame Intra-chr q24.31 q24.31 10351 ChimerSeq FusionScan TCGA_RNA-Seq PAPOLA-BTF3 PAPOLA chr14 97027048 + BTF3 chr5 72798312 + Exonic hg19 OV TCGA-36-1568 2 In-Frame Inter-chr q32.2 q13.2 10352 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R2A-BNIP3L PPP2R2A chr8 26151256 + BNIP3L chr8 26265515 + Exonic hg19 OV TCGA-24-1564 3 Out-of-Frame Intra-chr p21.2 p21.2 Tumor suppressor gene Seq+ 10353 ChimerSeq FusionScan TCGA_RNA-Seq ST3GAL2-COG4 ST3GAL2 chr16 70422269 - COG4 chr16 70534994 - Exonic hg19 OV TCGA-13-1411 7 In-Frame Intra-chr q22.1 q22.1 Seq+ 10354 ChimerSeq FusionScan TCGA_RNA-Seq CBFA2T2-BPIFB3 CBFA2T2 chr20 32078107 + BPIFB3 chr20 31647183 + Exonic hg19 OV TCGA-13-1411 3 Out-of-Frame Intra-chr q11.21 q11.21 10355 ChimerSeq FusionScan TCGA_RNA-Seq RPS9-CLTA RPS9 chr19 54705149 + CLTA chr9 36197547 + Exonic hg19 OV TCGA-29-1777 2 3'UTR-CDS Inter-chr p13.3 10356 ChimerSeq FusionScan TCGA_RNA-Seq LRRFIP1-MSRB2 LRRFIP1 chr2 238617273 + MSRB2 chr10 23393072 + Exonic hg19 OV TCGA-29-1777 2 Out-of-Frame Inter-chr q37.3 p12.2 10357 ChimerSeq FusionScan TCGA_RNA-Seq ALDH2-ATXN2 ALDH2 chr12 112204900 + ATXN2 chr12 111908546 - Exonic hg19 OV TCGA-29-1777 2 Out-of-Frame Intra-chr q24.12 q24.12 Seq+ 10358 ChimerSeq FusionScan TCGA_RNA-Seq RCOR3-TTI1 RCOR3 chr1 211433506 + TTI1 chr20 36624864 - Exonic hg19 OV TCGA-29-1696 2 In-Frame Inter-chr q32.2 q11.23 10359 ChimerSeq FusionScan TCGA_RNA-Seq PIGH-AFTPH PIGH chr14 68060459 - AFTPH chr2 64800079 + Exonic hg19 OV TCGA-29-1696 2 In-Frame Inter-chr q24.1 p14 10360 ChimerSeq FusionScan TCGA_RNA-Seq PLAA-CCS PLAA chr9 26907831 - CCS chr11 66372959 + Exonic hg19 OV TCGA-29-1696 2 Out-of-Frame Inter-chr p21.2 q13.2 10361 ChimerSeq FusionScan TCGA_RNA-Seq INPP5B-TRIT1 INPP5B chr1 38351309 - TRIT1 chr1 40313332 - Exonic hg19 OV TCGA-25-1633 6 In-Frame Intra-chr p34.3 p34.2 Tumor suppressor gene Seq+ 10362 ChimerSeq FusionScan TCGA_RNA-Seq IFT172-KRTCAP3 IFT172 chr2 27669126 - KRTCAP3 chr2 27669167 + Exonic hg19 OV TCGA-25-1633 3 CDS-3'UTR Intra-chr p23.3 p23.3 10363 ChimerSeq FusionScan TCGA_RNA-Seq ZNF7-PPIE ZNF7 chr8 146062892 + PPIE chr1 40205836 + Exonic hg19 OV TCGA-25-1633 2 In-Frame Inter-chr q24.3 Transcription factor p34.2 Seq+ 10364 ChimerSeq FusionScan TCGA_RNA-Seq ZNF611-GNAS ZNF611 chr19 53238253 - GNAS chr20 57470666 + Exonic hg19 OV TCGA-25-1633 2 5'UTR-5'UTR Inter-chr q13.41 Transcription factor q13.32 Oncogene 10365 ChimerSeq FusionScan TCGA_RNA-Seq MAN1A2-CD101 MAN1A2 chr1 118045592 + CD101 chr1 117576481 + Exonic hg19 OV TCGA-13-1512 6 Out-of-Frame Intra-chr p12 p13.1 Seq+ 10366 ChimerSeq FusionScan TCGA_RNA-Seq ARID4B-GNPAT ARID4B chr1 235490228 - GNPAT chr1 231398468 + Exonic hg19 OV TCGA-13-1512 4 In-Frame Intra-chr q42.3 q42.2 Seq+ 10367 ChimerSeq FusionScan TCGA_RNA-Seq ACAP3-CPSF3L ACAP3 chr1 1243148 - CPSF3L chr1 1250818 - Exonic hg19 OV TCGA-13-1512 3 Out-of-Frame Intra-chr p36.33 Seq+ 10368 ChimerSeq FusionScan TCGA_RNA-Seq ATAD2-ERGIC2 ATAD2 chr8 124392768 - ERGIC2 chr12 29514618 - Exonic hg19 OV TCGA-13-1512 2 Out-of-Frame Inter-chr q24.13 p11.22 10369 ChimerSeq FusionScan TCGA_RNA-Seq EEF1D-IGF2 EEF1D chr8 144679517 - IGF2 chr11 2156759 - Exonic hg19 OV TCGA-13-1512 2 5'UTR-5'UTR Inter-chr p15.5 Oncogene 10370 ChimerSeq FusionScan TCGA_RNA-Seq FN1-COL3A1 FN1 chr2 216246934 - COL3A1 chr2 189875373 + Exonic hg19 OV TCGA-13-1512 2 Out-of-Frame Intra-chr q35 Oncogene q32.2 10371 ChimerSeq FusionScan TCGA_RNA-Seq RNF115-GPHN RNF115 chr1 145650540 + GPHN chr14 67490349 + Exonic hg19 OV TCGA-13-1512 2 In-Frame Inter-chr q21.1 q23.3 10372 ChimerSeq FusionScan TCGA_RNA-Seq ARID4B-GNPAT ARID4B chr1 235490228 - GNPAT chr1 231401038 + Exonic hg19 OV TCGA-13-1512 2 Out-of-Frame Intra-chr q42.3 q42.2 Seq+ 10373 ChimerSeq FusionScan TCGA_RNA-Seq KLHL22-UBE2L3 KLHL22 chr22 20843271 - UBE2L3 chr22 21947149 + Exonic hg19 OV TCGA-24-1845 5 Out-of-Frame Intra-chr q11.21 q11.21 Seq+ 10374 ChimerSeq FusionScan TCGA_RNA-Seq MED1-CLPB MED1 chr17 37607290 - CLPB chr11 72040848 - Exonic hg19 OV TCGA-24-1845 3 In-Frame Inter-chr q12 Tumor suppressor gene q13.4 Seq+ 10375 ChimerSeq FusionScan TCGA_RNA-Seq MREG-COMMD1 MREG chr2 216861028 - COMMD1 chr2 62362965 + Exonic hg19 OV TCGA-24-1845 2 In-Frame Intra-chr q35 p15 10376 ChimerSeq FusionScan TCGA_RNA-Seq FRMD8-AHSA1 FRMD8 chr11 65154592 + AHSA1 chr14 77935419 + Exonic hg19 OV TCGA-24-1845 2 In-Frame Inter-chr q13.1 q24.3 10377 ChimerSeq FusionScan TCGA_RNA-Seq RELB-DRG1 RELB chr19 45515534 + DRG1 chr22 31806997 + Exonic hg19 OV TCGA-24-1845 2 Out-of-Frame Inter-chr q13.32 Transcription factor q12.2 Tumor suppressor gene 10378 ChimerSeq FusionScan TCGA_RNA-Seq SARNP-PTGES3 SARNP chr12 56211449 - PTGES3 chr12 57065631 - Exonic hg19 OV TCGA-30-1714 18 In-Frame Intra-chr q13.2 q13.3 Seq+ 10379 ChimerSeq FusionScan TCGA_RNA-Seq CNNM2-RBP4 CNNM2 chr10 104679858 + RBP4 chr10 95353792 - Exonic hg19 OV TCGA-30-1714 4 In-Frame Intra-chr q24.32 q23.33 Seq+ 10380 ChimerSeq FusionScan TCGA_RNA-Seq RNF115-NOTCH2NL RNF115 chr1 145650540 + NOTCH2NL chr1 145281368 + Exonic hg19 OV TCGA-30-1714 4 Out-of-Frame Intra-chr q21.1 q21.1 Seq+ 10381 ChimerSeq FusionScan TCGA_RNA-Seq SPECC1L-CDH4 SPECC1L chr22 24765288 + CDH4 chr20 60427809 + Exonic hg19 OV TCGA-30-1714 3 In-Frame Inter-chr q11.23 q13.33 Tumor suppressor gene Seq+ 10382 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R4-PHYHD1 PPP2R4 chr9 131882889 + PHYHD1 chr9 131689316 + Exonic hg19 OV TCGA-30-1714 3 In-Frame Intra-chr Tumor suppressor gene q34.11 Seq+ 10383 ChimerSeq FusionScan TCGA_RNA-Seq ACVR1-GNLY ACVR1 chr2 158732307 - GNLY chr2 85922442 + Exonic hg19 OV TCGA-30-1714 3 5'UTR-CDS Intra-chr q24.1 p11.2 Seq+ 10384 ChimerSeq FusionScan TCGA_RNA-Seq DANCR-FAM192A DANCR chr4 53579126 + FAM192A chr16 57207781 - Exonic hg19 OV TCGA-30-1714 2 5'UTR-5'UTR Inter-chr q12 q13 Seq+ 10385 ChimerSeq FusionScan TCGA_RNA-Seq ATP6V1B1-FUNDC1 ATP6V1B1 chr2 71170843 + FUNDC1 chrX 44401347 - Exonic hg19 OV TCGA-30-1714 2 Out-of-Frame Inter-chr p13.3 p11.3 10386 ChimerSeq FusionScan TCGA_RNA-Seq SARNP-PTGES3 SARNP chr12 56211449 - PTGES3 chr12 57064148 - Exonic hg19 OV TCGA-30-1714 2 In-Frame Intra-chr q13.2 q13.3 Seq+ 10387 ChimerSeq FusionScan TCGA_RNA-Seq SPRED3-RFXANK SPRED3 chr19 38885116 + RFXANK chr19 19304747 + Exonic hg19 OV TCGA-30-1714 2 3'UTR-5'UTR Intra-chr q13.2 p13.11 10388 ChimerSeq FusionScan TCGA_RNA-Seq MCM8-DNAJC21 MCM8 chr20 5948671 + DNAJC21 chr5 34954030 + Exonic hg19 OV TCGA-30-1714 2 In-Frame Inter-chr p12.3 p13.2 10389 ChimerSeq FusionScan TCGA_RNA-Seq HOMER2-TM6SF1 HOMER2 chr15 83621282 - TM6SF1 chr15 83781548 + Exonic hg19 OV TCGA-59-2363 8 In-Frame Intra-chr q25.2 Tumor suppressor gene q25.2 Seq+ 10390 ChimerSeq FusionScan TCGA_RNA-Seq SPAG1-POLR2K SPAG1 chr8 101174648 + POLR2K chr8 101163574 + Exonic hg19 OV TCGA-59-2363 4 CDS-5'UTR Intra-chr q22.2 q22.2 Seq+ 10391 ChimerSeq FusionScan TCGA_RNA-Seq MAST4-PPWD1 MAST4 chr5 66386059 + PPWD1 chr5 64863339 + Exonic hg19 OV TCGA-59-2363 3 Out-of-Frame Intra-chr q12.3 AGC:MAST q12.3 Seq+ 10392 ChimerSeq FusionScan TCGA_RNA-Seq PPM1B-CTNND1 PPM1B chr2 44445676 + CTNND1 chr11 57569204 + Exonic hg19 OV TCGA-59-2363 2 Out-of-Frame Inter-chr p21 q12.1 Tumor suppressor gene 10393 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152480271 + Exonic hg19 OV TCGA-59-2363 2 Out-of-Frame Intra-chr q36.1 Seq+ 10394 ChimerSeq FusionScan TCGA_RNA-Seq CCNY-PARD3 CCNY chr10 35626135 + PARD3 chr10 34985347 - Exonic hg19 OV TCGA-59-2363 2 Out-of-Frame Intra-chr p11.21 p11.21 KB Seq+ 10395 ChimerSeq FusionScan TCGA_RNA-Seq NPLOC4-PLCE1 NPLOC4 chr17 79577235 - PLCE1 chr10 96081657 + Exonic hg19 OV TCGA-59-2363 2 In-Frame Inter-chr q25.3 q23.33 Tumor suppressor gene 10396 ChimerSeq FusionScan TCGA_RNA-Seq EXT1-PTK2 EXT1 chr8 118816960 - PTK2 chr8 141774389 - Exonic hg19 OV TCGA-59-2363 2 Out-of-Frame Intra-chr q24.11 Oncogene Tumor suppressor gene q24.3 Seq+ 10397 ChimerSeq FusionScan TCGA_RNA-Seq AFAP1-KCNIP4 AFAP1 chr4 7787920 - KCNIP4 chr4 20731752 - Exonic hg19 OV TCGA-24-1562 10 In-Frame Intra-chr p16.1 p15.2 Seq+ 10398 ChimerSeq FusionScan TCGA_RNA-Seq CREBBP-SRL CREBBP chr16 3794894 - SRL chr16 4254635 - Exonic hg19 OV TCGA-24-1562 5 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 10399 ChimerSeq FusionScan TCGA_RNA-Seq MORF4L1-PSMA4 MORF4L1 chr15 79186572 + PSMA4 chr15 78841131 + Exonic hg19 OV TCGA-24-1562 2 In-Frame Intra-chr q25.1 q25.1 10400 ChimerSeq FusionScan TCGA_RNA-Seq EGFL6-KDM4C EGFL6 chrX 13618213 + KDM4C chr9 7046861 + Exonic hg19 OV TCGA-24-1562 2 Out-of-Frame Inter-chr p22.2 p24.1 10401 ChimerSeq FusionScan TCGA_RNA-Seq RBM47-EXOC1 RBM47 chr4 40546438 - EXOC1 chr4 56744082 + Exonic hg19 OV TCGA-36-1571 7 5'UTR-CDS Intra-chr p14 q12 Seq+ 10402 ChimerSeq FusionScan TCGA_RNA-Seq FARP2-AFF3 FARP2 chr2 242357524 + AFF3 chr2 100453986 - Exonic hg19 OV TCGA-36-1571 2 In-Frame Intra-chr q37.3 q11.2 Oncogene 10403 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPH1-TRAFD1 HNRNPH1 chr5 179047892 - TRAFD1 chr12 112579892 + Exonic hg19 OV TCGA-36-1571 2 In-Frame Inter-chr q35.3 q24.13 Transcription factor 10404 ChimerSeq FusionScan TCGA_RNA-Seq DOK5-CLEC17A DOK5 chr20 53260117 + CLEC17A chr19 14717804 + Exonic hg19 OV TCGA-36-1571 2 Out-of-Frame Inter-chr q13.2 p13.12 Seq+ 10405 ChimerSeq FusionScan TCGA_RNA-Seq NEO1-THSD4 NEO1 chr15 73470768 + THSD4 chr15 71704025 + Exonic hg19 OV TCGA-24-1428 16 In-Frame Intra-chr q24.1 q23 Seq+ 10406 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC5-TPD52L2 DNAJC5 chr20 62562375 + TPD52L2 chr20 62500648 + Exonic hg19 OV TCGA-24-1428 14 In-Frame Intra-chr q13.33 q13.33 Seq+ 10407 ChimerSeq FusionScan TCGA_RNA-Seq FOXK2-NARF FOXK2 chr17 80478183 + NARF chr17 80436675 + Exonic hg19 OV TCGA-24-1428 9 Out-of-Frame Intra-chr q25.3 Transcription factor q25.3 Seq+ 10408 ChimerSeq FusionScan TCGA_RNA-Seq ACAP2-DOCK8 ACAP2 chr3 195112818 - DOCK8 chr9 340158 + Exonic hg19 OV TCGA-24-1428 9 Out-of-Frame Inter-chr q29 p24.3 Seq+ 10409 ChimerSeq FusionScan TCGA_RNA-Seq MRPL9-RORC MRPL9 chr1 151733291 - RORC chr1 151789756 - Exonic hg19 OV TCGA-24-1428 4 Out-of-Frame Intra-chr q21.3 q21.3 Transcription factor 10410 ChimerSeq FusionScan TCGA_RNA-Seq TTC19-TMEM45A TTC19 chr17 15930016 + TMEM45A chr3 100287665 + Exonic hg19 OV TCGA-24-1428 3 Out-of-Frame Inter-chr p12 q12.2 Seq+ 10411 ChimerSeq FusionScan TCGA_RNA-Seq PKD1-RAVER1 PKD1 chr16 2168676 - RAVER1 chr19 10439787 - Exonic hg19 OV TCGA-24-1428 3 In-Frame Inter-chr p13.3 CAMK:PKD Tumor suppressor gene p13.2 10412 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R12C-CNN2 PPP1R12C chr19 55610151 - CNN2 chr19 1036128 + Exonic hg19 OV TCGA-24-1428 2 In-Frame Intra-chr q13.42 p13.3 Seq+ 10413 ChimerSeq FusionScan TCGA_RNA-Seq ENC1-TBCD ENC1 chr5 73936131 - TBCD chr17 80863811 + Exonic hg19 OV TCGA-24-1428 2 5'UTR-CDS Inter-chr q13.3 10414 ChimerSeq FusionScan TCGA_RNA-Seq C21orf15-FAM95B1 C21orf15 chr21 15219079 - FAM95B1 chr9 42473935 + Exonic hg19 OV TCGA-24-1428 2 3'UTR-5'UTR Inter-chr p11.2 10415 ChimerSeq FusionScan TCGA_RNA-Seq ARF1-SIRT3 ARF1 chr1 228270466 + SIRT3 chr11 233215 - Exonic hg19 OV TCGA-24-1428 2 5'UTR-CDS Inter-chr q42.13 Tumor suppressor gene p15.5 Tumor suppressor gene 10416 ChimerSeq FusionScan TCGA_RNA-Seq EPN1-ZNF787 EPN1 chr19 56197011 + ZNF787 chr19 56614596 - Exonic hg19 OV TCGA-24-1428 2 CDS-5'UTR Intra-chr q13.42 q13.43 Transcription factor 10417 ChimerSeq FusionScan TCGA_RNA-Seq MKNK1-ATPAF1 MKNK1 chr1 47059784 - ATPAF1 chr1 47110928 - Exonic hg19 OV TCGA-24-1428 2 Out-of-Frame Intra-chr p33 p33 Seq+ 10418 ChimerSeq FusionScan TCGA_RNA-Seq ALDOA-HSPB1 ALDOA chr16 30080299 + HSPB1 chr7 75933118 + Exonic hg19 OV TCGA-24-1428 2 Out-of-Frame Inter-chr p11.2 q11.23 10419 ChimerSeq FusionScan TCGA_RNA-Seq RYBP-TAX1BP1 RYBP chr3 72495646 - TAX1BP1 chr7 27788136 + Exonic hg19 OV TCGA-24-1428 2 CDS-5'UTR Inter-chr p15.2 10420 ChimerSeq FusionScan TCGA_RNA-Seq NEO1-YWHAE NEO1 chr15 73470768 + YWHAE chr17 1268352 - Exonic hg19 OV TCGA-24-1428 2 In-Frame Inter-chr q24.1 p13.3 10421 ChimerSeq FusionScan TCGA_RNA-Seq BRWD1-DSCAM BRWD1 chr21 40641824 - DSCAM chr21 41385313 - Exonic hg19 OV TCGA-24-2289 7 Out-of-Frame Intra-chr q22.2 q22.2 Seq+ 10422 ChimerSeq FusionScan TCGA_RNA-Seq VPS37B-ABCB9 VPS37B chr12 123380498 - ABCB9 chr12 123416875 - Exonic hg19 OV TCGA-24-2289 6 Out-of-Frame Intra-chr q24.31 q24.31 Seq+ 10423 ChimerSeq FusionScan TCGA_RNA-Seq PPP3CC-PIWIL2 PPP3CC chr8 22298971 + PIWIL2 chr8 22171840 + Exonic hg19 OV TCGA-24-2289 3 Out-of-Frame Intra-chr p21.3 Tumor suppressor gene p21.3 Tumor suppressor gene Seq+ 10424 ChimerSeq FusionScan TCGA_RNA-Seq CELF1-STK32A CELF1 chr11 47508301 - STK32A chr5 146703460 + Exonic hg19 OV TCGA-24-2289 2 Out-of-Frame Inter-chr p11.2 q32 Seq+ 10425 ChimerSeq FusionScan TCGA_RNA-Seq SMAD3-MAP2K1 SMAD3 chr15 67358698 + MAP2K1 chr15 66727364 + Exonic hg19 OV TCGA-59-2351 5 In-Frame Intra-chr q22.33 Transcription factor q22.31 STE:STE7 Oncogene Seq+ 10426 ChimerSeq FusionScan TCGA_RNA-Seq MID1-PHKB MID1 chrX 10851672 - PHKB chr16 47549431 + Exonic hg19 OV TCGA-59-2351 2 5'UTR-CDS Inter-chr p22.2 q12.1 10427 ChimerSeq FusionScan TCGA_RNA-Seq ENOX1-RAD51B ENOX1 chr13 44360787 - RAD51B chr14 68934888 + Exonic hg19 OV TCGA-25-1312 2 5'UTR-CDS Inter-chr q14.11 q24.1 Seq+ 10428 ChimerSeq FusionScan TCGA_RNA-Seq LPHN1-C19orf43 LPHN1 chr19 14316796 - C19orf43 chr19 12842235 - Exonic hg19 OV TCGA-04-1350 12 5'UTR-CDS Intra-chr p13.13 Seq+ 10429 ChimerSeq FusionScan TCGA_RNA-Seq HSH2D-CIB3 HSH2D chr19 16259685 + CIB3 chr19 16275724 - Exonic hg19 OV TCGA-04-1350 3 Out-of-Frame Intra-chr p13.11 p13.11 Seq+ 10430 ChimerSeq FusionScan TCGA_RNA-Seq CAPZA1-CDYL CAPZA1 chr1 113162505 + CDYL chr6 4935748 + Exonic hg19 OV TCGA-04-1350 2 Out-of-Frame Inter-chr p13.2 p25.1 10431 ChimerSeq FusionScan TCGA_RNA-Seq RPS19-PRKCSH RPS19 chr19 42365281 + PRKCSH chr19 11561460 + Exonic hg19 OV TCGA-04-1350 2 CDS-3'UTR Intra-chr q13.2 p13.2 10432 ChimerSeq FusionScan TCGA_RNA-Seq RPL5-EIF3M RPL5 chr1 93297674 + EIF3M chr11 32616459 + Exonic hg19 OV TCGA-04-1350 2 Out-of-Frame Inter-chr p22.1 Tumor suppressor gene p13 10433 ChimerSeq FusionScan TCGA_RNA-Seq CNOT2-C3orf19 CNOT2 chr12 70738008 + C3orf19 chr3 14706534 + Exonic hg19 OV TCGA-04-1350 2 In-Frame Inter-chr q15 10434 ChimerSeq FusionScan TCGA_RNA-Seq TPI1-SMARCC2 TPI1 chr12 6978937 + SMARCC2 chr12 56557549 - Exonic hg19 OV TCGA-04-1350 2 Out-of-Frame Intra-chr p13.31 q13.2 10435 ChimerSeq FusionScan TCGA_RNA-Seq FGFR2-USP10 FGFR2 chr10 123353222 - USP10 chr16 84792321 + Exonic hg19 OV TCGA-24-1424 18 In-Frame Inter-chr q26.13 TK:FGFR Oncogene q24.1 Seq+ 10436 ChimerSeq FusionScan TCGA_RNA-Seq PPP1CB-PLB1 PPP1CB chr2 28975042 + PLB1 chr2 28808627 + Exonic hg19 OV TCGA-24-1424 8 Out-of-Frame Intra-chr p23.2 p23.2 Seq+ 10437 ChimerSeq FusionScan TCGA_RNA-Seq MBOAT2-YWHAE MBOAT2 chr2 9143668 - YWHAE chr17 1257641 - Exonic hg19 OV TCGA-24-1424 8 Out-of-Frame Inter-chr p25.1 p13.3 Seq+ 10438 ChimerSeq FusionScan TCGA_RNA-Seq GPATCH8-MYO1D GPATCH8 chr17 42580693 - MYO1D chr17 30821933 - Exonic hg19 OV TCGA-24-1424 6 Out-of-Frame Intra-chr q21.31 q11.2 Seq+ 10439 ChimerSeq FusionScan TCGA_RNA-Seq DNAH17-NCAN DNAH17 chr17 76503359 - NCAN chr19 19327755 + Exonic hg19 OV TCGA-24-1424 6 CDS-5'UTR Inter-chr q25.3 p13.11 Seq+ 10440 ChimerSeq FusionScan TCGA_RNA-Seq USP18-BAG6 USP18 chr22 18640587 + BAG6 chr6 31607003 - Exonic hg19 OV TCGA-24-1424 6 In-Frame Inter-chr q11.21 p21.33 Seq+ 10441 ChimerSeq FusionScan TCGA_RNA-Seq TAX1BP1-JAZF1 TAX1BP1 chr7 27797752 + JAZF1 chr7 28031600 - Exonic hg19 OV TCGA-24-1424 5 In-Frame Intra-chr p15.2 p15.1 Transcription factor Seq+ 10442 ChimerSeq FusionScan TCGA_RNA-Seq NUPL2-EPCAM NUPL2 chr7 23221825 + EPCAM chr2 47604152 + Exonic hg19 OV TCGA-24-1424 5 Out-of-Frame Inter-chr p15.3 p21 Seq+ 10443 ChimerSeq FusionScan TCGA_RNA-Seq MBOAT2-YWHAE MBOAT2 chr2 9143668 - YWHAE chr17 1248793 - Exonic hg19 OV TCGA-24-1424 5 Out-of-Frame Inter-chr p25.1 p13.3 Seq+ 10444 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC17-NDP ZCCHC17 chr1 31821821 + NDP chrX 43818098 - Exonic hg19 OV TCGA-24-1424 4 CDS-5'UTR Inter-chr p35.2 p11.3 Seq+ 10445 ChimerSeq FusionScan TCGA_RNA-Seq AGRN-NDUFS5 AGRN chr1 970704 + NDUFS5 chr1 39494394 + Exonic hg19 OV TCGA-24-1424 4 CDS-5'UTR Intra-chr p36.33 p34.3 Seq+ 10446 ChimerSeq FusionScan TCGA_RNA-Seq ZMIZ1-C10orf107 ZMIZ1 chr10 80921890 + C10orf107 chr10 63445798 + Exonic hg19 OV TCGA-24-1424 3 5'UTR-CDS Intra-chr q22.3 q21.2 Seq+ 10447 ChimerSeq FusionScan TCGA_RNA-Seq ACTN4-LGALS7B ACTN4 chr19 39138547 + LGALS7B chr19 39280255 + Exonic hg19 OV TCGA-24-1424 3 In-Frame Intra-chr Seq+ 10448 ChimerSeq FusionScan TCGA_RNA-Seq ZNF234-CEACAM20 ZNF234 chr19 44654658 + CEACAM20 chr19 45029277 - Exonic hg19 OV TCGA-24-1424 3 In-Frame Intra-chr q13.31 Transcription factor q13.31 Seq+ 10449 ChimerSeq FusionScan TCGA_RNA-Seq GOLGA4-WFDC2 GOLGA4 chr3 37369316 + WFDC2 chr20 44099028 + Exonic hg19 OV TCGA-24-1424 2 Out-of-Frame Inter-chr p22.2 q13.12 10450 ChimerSeq FusionScan TCGA_RNA-Seq LYPLA1-TPD52 LYPLA1 chr8 55013467 - TPD52 chr8 80954903 - Exonic hg19 OV TCGA-20-1686 12 In-Frame Intra-chr q11.23 q21.13 Seq+ 10451 ChimerSeq FusionScan TCGA_RNA-Seq NOS2-AATF NOS2 chr17 26107792 - AATF chr17 35413900 + Exonic hg19 OV TCGA-20-1686 6 In-Frame Intra-chr q11.2 Seq+ 10452 ChimerSeq FusionScan TCGA_RNA-Seq EPT1-CHST8 EPT1 chr2 26598016 + CHST8 chr19 34262317 + Exonic hg19 OV TCGA-20-1686 2 In-Frame Inter-chr q13.11 10453 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-MUC1 ERBB2 chr17 37872192 + MUC1 chr1 155159850 - Exonic hg19 OV TCGA-20-1686 2 In-Frame Inter-chr q12 Oncogene q22 Oncogene 10454 ChimerSeq FusionScan TCGA_RNA-Seq WFDC2-ANP32A WFDC2 chr20 44099172 + ANP32A chr15 69075392 - Exonic hg19 OV TCGA-20-1686 2 In-Frame Inter-chr q13.12 q23 Tumor suppressor gene 10455 ChimerSeq FusionScan TCGA_RNA-Seq EPT1-CHST8 EPT1 chr2 26596497 + CHST8 chr19 34262317 + Exonic hg19 OV TCGA-20-1686 2 Out-of-Frame Inter-chr q13.11 10456 ChimerSeq FusionScan TCGA_RNA-Seq RARA-CDK12 RARA chr17 38504716 + CDK12 chr17 37686856 + Exonic hg19 OV TCGA-3P-A9WA 8 Out-of-Frame Intra-chr q21.2 Oncogene Transcription factor q12 Oncogene Seq+ 10457 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0232-MAN2B2 KIAA0232 chr4 6878484 + MAN2B2 chr4 6610833 + Exonic hg19 OV TCGA-3P-A9WA 8 Out-of-Frame Intra-chr p16.1 p16.1 Seq+ 10458 ChimerSeq FusionScan TCGA_RNA-Seq STX18-LYAR STX18 chr4 4440120 - LYAR chr4 4285522 - Exonic hg19 OV TCGA-3P-A9WA 5 CDS-5'UTR Intra-chr p16.2 p16.3 Seq+ 10459 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D15-E2F5 TBC1D15 chr12 72233591 + E2F5 chr8 86114381 + Exonic hg19 OV TCGA-3P-A9WA 2 In-Frame Inter-chr q21.1 q21.2 Transcription factor 10460 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KC1-FLVCR1 RPS6KC1 chr1 213224851 + FLVCR1 chr1 213068327 + Exonic hg19 OV TCGA-3P-A9WA 2 Out-of-Frame Intra-chr q32.3 q32.3 10461 ChimerSeq FusionScan TCGA_RNA-Seq STX18-LYAR STX18 chr4 4440120 - LYAR chr4 4288299 - Exonic hg19 OV TCGA-3P-A9WA 2 CDS-5'UTR Intra-chr p16.2 p16.3 Seq+ 10462 ChimerSeq FusionScan TCGA_RNA-Seq RARA-CDK12 RARA chr17 38504716 + CDK12 chr17 37686883 + Exonic hg19 OV TCGA-3P-A9WA 2 Out-of-Frame Intra-chr q21.2 Oncogene Transcription factor q12 Oncogene Seq+ 10463 ChimerSeq FusionScan TCGA_RNA-Seq VDAC3-RNF24 VDAC3 chr8 42249446 + RNF24 chr20 3928926 - Exonic hg19 OV TCGA-3P-A9WA 2 5'UTR-CDS Inter-chr p11.21 p13 10464 ChimerSeq FusionScan TCGA_RNA-Seq PPP6R1-TNNI3 PPP6R1 chr19 55758244 - TNNI3 chr19 55669100 - Exonic hg19 OV TCGA-09-1665 7 CDS-5'UTR Intra-chr q13.42 q13.42 10465 ChimerSeq FusionScan TCGA_RNA-Seq TTC12-TYR TTC12 chr11 113215162 + TYR chr11 89017940 + Exonic hg19 OV TCGA-09-1665 3 In-Frame Intra-chr q23.2 q14.3 10466 ChimerSeq FusionScan TCGA_RNA-Seq EPB41L4A-REEP5 EPB41L4A chr5 111519712 - REEP5 chr5 112238215 - Exonic hg19 OV TCGA-09-1665 3 In-Frame Intra-chr q22.2 q22.2 Seq+ 10467 ChimerSeq FusionScan TCGA_RNA-Seq FBXO46-CLASRP FBXO46 chr19 46234106 - CLASRP chr19 45570594 + Exonic hg19 OV TCGA-09-1665 3 5'UTR-CDS Intra-chr q13.32 q13.32 10468 ChimerSeq FusionScan TCGA_RNA-Seq FNBP4-SPEF2 FNBP4 chr11 47772467 - SPEF2 chr5 35800069 + Exonic hg19 OV TCGA-09-1665 2 In-Frame Inter-chr p11.2 p13.2 10469 ChimerSeq FusionScan TCGA_RNA-Seq RPL18A-SSBP4 RPL18A chr19 17970783 + SSBP4 chr19 18538160 + Exonic hg19 OV TCGA-09-1665 2 Out-of-Frame Intra-chr p13.11 p13.11 10470 ChimerSeq FusionScan TCGA_RNA-Seq ZNRF3-PREPL ZNRF3 chr22 29280054 + PREPL chr2 44556251 - Exonic hg19 OV TCGA-09-1665 2 In-Frame Inter-chr q12.1 p21 Seq+ 10471 ChimerSeq FusionScan TCGA_RNA-Seq KIF27-FAM48A KIF27 chr9 86536285 - FAM48A chr13 37598579 - Exonic hg19 OV TCGA-09-1665 2 5'UTR-CDS Inter-chr q21.32 10472 ChimerSeq FusionScan TCGA_RNA-Seq NADKD1-FOXP1 NADKD1 chr5 36227578 - FOXP1 chr3 71247543 - Exonic hg19 OV TCGA-09-1665 2 5'UTR-5'UTR Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor 10473 ChimerSeq FusionScan TCGA_RNA-Seq PAK1-GNAS PAK1 chr11 77184596 - GNAS chr20 57470666 + Exonic hg19 OV TCGA-29-1690 2 5'UTR-5'UTR Inter-chr q14.1 STE:STE20 q13.32 Oncogene 10474 ChimerSeq FusionScan TCGA_RNA-Seq UBE2V1-FARP1 UBE2V1 chr20 48729643 - FARP1 chr13 98865473 + Exonic hg19 OV TCGA-29-1690 2 5'UTR-5'UTR Inter-chr q13.13 q32.2 10475 ChimerSeq FusionScan TCGA_RNA-Seq PPFIBP1-VIM PPFIBP1 chr12 27807747 + VIM chr10 17277167 + Exonic hg19 OV TCGA-29-1690 2 In-Frame Inter-chr p11.23 p13 Tumor suppressor gene 10476 ChimerSeq FusionScan TCGA_RNA-Seq PAK1-GNAI3 PAK1 chr11 77184596 - GNAI3 chr1 110116358 + Exonic hg19 OV TCGA-29-1690 2 5'UTR-CDS Inter-chr q14.1 STE:STE20 p13.3 10477 ChimerSeq FusionScan TCGA_RNA-Seq SLC39A11-PITPNC1 SLC39A11 chr17 71027694 - PITPNC1 chr17 65528917 + Exonic hg19 OV TCGA-25-2397 4 In-Frame Intra-chr q25.1 q24.2 Seq+ 10478 ChimerSeq FusionScan TCGA_RNA-Seq NR6A1-GOLGA1 NR6A1 chr9 127495586 - GOLGA1 chr9 127652757 - Exonic hg19 OV TCGA-25-2397 3 Out-of-Frame Intra-chr q33.3 Transcription factor q33.3 Seq+ 10479 ChimerSeq FusionScan TCGA_RNA-Seq NBN-XRN2 NBN chr8 90994949 - XRN2 chr20 21367505 + Exonic hg19 OV TCGA-25-2397 2 Out-of-Frame Inter-chr q21.3 Oncogene Tumor suppressor gene p11.22 10480 ChimerSeq FusionScan TCGA_RNA-Seq YWHAG-RAB11FIP1 YWHAG chr7 75988038 - RAB11FIP1 chr8 37735069 - Exonic hg19 OV TCGA-13-0908 10 Out-of-Frame Inter-chr q11.23 p11.23 Seq+ 10481 ChimerSeq FusionScan TCGA_RNA-Seq DNMT3A-NCKAP1 DNMT3A chr2 25564694 - NCKAP1 chr2 183853914 - Exonic hg19 OV TCGA-13-0908 4 5'UTR-CDS Intra-chr p23.3 Oncogene Tumor suppressor gene q32.1 Seq+ 10482 ChimerSeq FusionScan TCGA_RNA-Seq STAG1-TBL1XR1 STAG1 chr3 136471036 - TBL1XR1 chr3 176782810 - Exonic hg19 OV TCGA-13-0908 3 5'UTR-5'UTR Intra-chr q22.3 q26.32 Seq+ 10483 ChimerSeq FusionScan TCGA_RNA-Seq ASMTL-CLEC7A ASMTL chrX 1540550 - CLEC7A chr12 10271189 - Exonic hg19 OV TCGA-13-0908 3 In-Frame Inter-chr p22.33 p13.2 Seq+ 10484 ChimerSeq FusionScan TCGA_RNA-Seq PUM1-EXT1 PUM1 chr1 31409489 - EXT1 chr8 118849440 - Exonic hg19 OV TCGA-13-0908 2 Out-of-Frame Inter-chr p35.2 q24.11 Oncogene Tumor suppressor gene 10485 ChimerSeq FusionScan TCGA_RNA-Seq DNMT3A-NCKAP1 DNMT3A chr2 25565298 - NCKAP1 chr2 183853914 - Exonic hg19 OV TCGA-13-0908 2 5'UTR-CDS Intra-chr p23.3 Oncogene Tumor suppressor gene q32.1 Seq+ 10486 ChimerSeq FusionScan TCGA_RNA-Seq TNKS-KHDRBS3 TNKS chr8 9622300 + KHDRBS3 chr8 136619197 + Exonic hg19 OV TCGA-13-0884 5 In-Frame Intra-chr p23.1 q24.23 Seq+ 10487 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 OV TCGA-13-0884 2 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 10488 ChimerSeq FusionScan TCGA_RNA-Seq HPS3-CPB1 HPS3 chr3 148847727 + CPB1 chr3 148575243 + Exonic hg19 OV TCGA-13-1495 17 Out-of-Frame Intra-chr q24 q24 Seq+ 10489 ChimerSeq FusionScan TCGA_RNA-Seq KAT6B-ADK KAT6B chr10 76603236 + ADK chr10 76468078 + Exonic hg19 OV TCGA-13-1495 12 Out-of-Frame Intra-chr Oncogene q22.2 Seq+ 10490 ChimerSeq FusionScan TCGA_RNA-Seq PRPSAP1-SRSF2 PRPSAP1 chr17 74344609 - SRSF2 chr17 74731240 - Exonic hg19 OV TCGA-13-1495 8 CDS-3'UTR Intra-chr q25.1 q25.1 Oncogene Seq+ 10491 ChimerSeq FusionScan TCGA_RNA-Seq FAM195A-RAB11FIP3 FAM195A chr16 692249 + RAB11FIP3 chr16 532524 + Exonic hg19 OV TCGA-13-1495 5 Out-of-Frame Intra-chr Seq+ 10492 ChimerSeq FusionScan TCGA_RNA-Seq CTXN1-BLVRB CTXN1 chr19 7990851 - BLVRB chr19 40964452 - Exonic hg19 OV TCGA-13-1495 3 5'UTR-CDS Intra-chr p13.2 q13.2 Seq+ 10493 ChimerSeq FusionScan TCGA_RNA-Seq GAL3ST2-AGXT GAL3ST2 chr2 242716399 + AGXT chr2 241810060 + Exonic hg19 OV TCGA-13-1495 2 Out-of-Frame Intra-chr q37.3 10494 ChimerSeq FusionScan TCGA_RNA-Seq ENAH-LIN9 ENAH chr1 225742607 - LIN9 chr1 226438620 - Exonic hg19 OV TCGA-13-1495 2 Out-of-Frame Intra-chr q42.12 q42.12 Tumor suppressor gene Seq+ 10495 ChimerSeq FusionScan TCGA_RNA-Seq LPP-POLR2H LPP chr3 188590551 + POLR2H chr3 184085964 + Exonic hg19 OV TCGA-13-1495 2 Out-of-Frame Intra-chr q27.3 Oncogene q27.1 10496 ChimerSeq FusionScan TCGA_RNA-Seq NRD1-ZCCHC11 NRD1 chr1 52343946 - ZCCHC11 chr1 52891179 - Exonic hg19 OV TCGA-13-1495 2 Out-of-Frame Intra-chr p32.3 10497 ChimerSeq FusionScan TCGA_RNA-Seq EIF3D-NDUFB2 EIF3D chr22 36914809 - NDUFB2 chr7 140406362 + Exonic hg19 OV TCGA-13-1495 2 CDS-3'UTR Inter-chr q12.3 q34 10498 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-COX5B RCC1 chr1 28832596 + COX5B chr2 98263529 + Exonic hg19 OV TCGA-13-1495 2 5'UTR-CDS Inter-chr p35.3 q11.2 10499 ChimerSeq FusionScan TCGA_RNA-Seq MSL2-STAG1 MSL2 chr3 135913813 - STAG1 chr3 136068205 - Exonic hg19 OV TCGA-13-1511 13 Out-of-Frame Intra-chr q22.3 q22.3 Seq+ 10500 ChimerSeq FusionScan TCGA_RNA-Seq LTBP1-BRE LTBP1 chr2 33174012 + BRE chr2 28352137 + Exonic hg19 OV TCGA-13-1511 9 Out-of-Frame Intra-chr p22.3 Seq+ 10501 ChimerSeq FusionScan TCGA_RNA-Seq USP6NL-FRMD4A USP6NL chr10 11639629 - FRMD4A chr10 13900912 - Exonic hg19 OV TCGA-13-1511 8 Out-of-Frame Intra-chr p14 p13 Seq+ 10502 ChimerSeq FusionScan TCGA_RNA-Seq MRPS18C-ENOPH1 MRPS18C chr4 84378111 + ENOPH1 chr4 83369072 + Exonic hg19 OV TCGA-13-1511 7 In-Frame Intra-chr q21.23 q21.22 Seq+ 10503 ChimerSeq FusionScan TCGA_RNA-Seq TSPAN4-VPREB3 TSPAN4 chr11 850367 + VPREB3 chr22 24095385 - Exonic hg19 OV TCGA-13-1511 6 Out-of-Frame Inter-chr p15.5 q11.23 Seq+ 10504 ChimerSeq FusionScan TCGA_RNA-Seq LITAF-BCAR4 LITAF chr16 11680741 - BCAR4 chr16 11914154 - Exonic hg19 OV TCGA-13-1511 4 5'UTR-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 10505 ChimerSeq FusionScan TCGA_RNA-Seq MRPS18C-ENOPH1 MRPS18C chr4 84379582 + ENOPH1 chr4 83369072 + Exonic hg19 OV TCGA-13-1511 4 In-Frame Intra-chr q21.23 q21.22 Seq+ 10506 ChimerSeq FusionScan TCGA_RNA-Seq PTPN9-SCAPER PTPN9 chr15 75871054 - SCAPER chr15 76726651 - Exonic hg19 OV TCGA-13-1511 4 In-Frame Intra-chr q24.2 q24.3 Seq+ 10507 ChimerSeq FusionScan TCGA_RNA-Seq LUC7L-AXIN1 LUC7L chr16 249060 - AXIN1 chr16 364683 - Exonic hg19 OV TCGA-13-1511 3 Out-of-Frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Seq+ 10508 ChimerSeq FusionScan TCGA_RNA-Seq ARID5B-BICC1 ARID5B chr10 63700167 + BICC1 chr10 60461833 + Exonic hg19 OV TCGA-13-1511 3 Out-of-Frame Intra-chr q21.2 Transcription factor q21.1 10509 ChimerSeq FusionScan TCGA_RNA-Seq SGPL1-ADAMTS14 SGPL1 chr10 72576636 + ADAMTS14 chr10 72517717 + Exonic hg19 OV TCGA-13-1511 3 In-Frame Intra-chr q22.1 q22.1 Seq+ 10510 ChimerSeq FusionScan TCGA_RNA-Seq VPS26A-LRRTM3 VPS26A chr10 70884036 + LRRTM3 chr10 68857344 + Exonic hg19 OV TCGA-13-1511 3 In-Frame Intra-chr q22.1 q21.3 Seq+ 10511 ChimerSeq FusionScan TCGA_RNA-Seq SLC35D1-MEIS1 SLC35D1 chr1 67507918 - MEIS1 chr2 66794584 + Exonic hg19 OV TCGA-13-1511 2 Out-of-Frame Inter-chr p31.3 p14 Transcription factor 10512 ChimerSeq FusionScan TCGA_RNA-Seq SEMA3F-RBM6 SEMA3F chr3 50197167 + RBM6 chr3 50000008 + Exonic hg19 OV TCGA-13-1511 2 CDS-5'UTR Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene Seq+ 10513 ChimerSeq FusionScan TCGA_RNA-Seq UBE2D2-PSD2 UBE2D2 chr5 138994551 + PSD2 chr5 139188975 + Exonic hg19 OV TCGA-13-1511 2 CDS-5'UTR Intra-chr q31.2 q31.2 Seq+ 10514 ChimerSeq FusionScan TCGA_RNA-Seq DNAJB14-C2orf76 DNAJB14 chr4 100867595 - C2orf76 chr2 120097547 - Exonic hg19 OV TCGA-13-1511 2 CDS-5'UTR Inter-chr q23 q14.2 10515 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 OV TCGA-13-1511 2 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 10516 ChimerSeq FusionScan TCGA_RNA-Seq SLC26A2-ARHGEF37 SLC26A2 chr5 149340542 + ARHGEF37 chr5 149003574 + Exonic hg19 OV TCGA-13-1511 2 5'UTR-CDS Intra-chr q32 q32 Seq+ 10517 ChimerSeq FusionScan TCGA_RNA-Seq TNS1-TMBIM1 TNS1 chr2 218682412 - TMBIM1 chr2 219142393 - Exonic hg19 OV TCGA-13-1511 2 Out-of-Frame Intra-chr q35 q35 Seq+ 10518 ChimerSeq FusionScan TCGA_RNA-Seq BICD1-CYP2F1 BICD1 chr12 32260478 + CYP2F1 chr19 41633805 + Exonic hg19 OV TCGA-5X-AA5U 5 Out-of-Frame Inter-chr p11.21 q13.2 10519 ChimerSeq FusionScan TCGA_RNA-Seq BCAT1-SLCO1A2 BCAT1 chr12 24982756 - SLCO1A2 chr12 21487643 - Exonic hg19 OV TCGA-5X-AA5U 4 CDS-5'UTR Intra-chr p12.1 p12.1 Seq+ 10520 ChimerSeq FusionScan TCGA_RNA-Seq SARS2-SIPA1L3 SARS2 chr19 39416844 - SIPA1L3 chr19 38519728 + Exonic hg19 OV TCGA-5X-AA5U 4 CDS-5'UTR Intra-chr q13.13 Seq+ 10521 ChimerSeq FusionScan TCGA_RNA-Seq SIPA1L3-ERC1 SIPA1L3 chr19 38579491 + ERC1 chr12 1192329 + Exonic hg19 OV TCGA-5X-AA5U 3 In-Frame Inter-chr q13.13 Seq+ 10522 ChimerSeq FusionScan TCGA_RNA-Seq ERC1-CACNA1C ERC1 chr12 1346070 + CACNA1C chr12 2558141 + Exonic hg19 OV TCGA-5X-AA5U 3 In-Frame Intra-chr p13.33 10523 ChimerSeq FusionScan TCGA_RNA-Seq SARS2-SIPA1L3 SARS2 chr19 39421109 - SIPA1L3 chr19 38519728 + Exonic hg19 OV TCGA-5X-AA5U 3 CDS-5'UTR Intra-chr q13.13 Seq+ 10524 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R21-STON1 PPP1R21 chr2 48738607 + STON1 chr2 48807725 + Exonic hg19 OV TCGA-5X-AA5U 2 5'UTR-5'UTR Intra-chr p16.3 p16.3 10525 ChimerSeq FusionScan TCGA_RNA-Seq PIGN-TMEM241 PIGN chr18 59828365 - TMEM241 chr18 21001408 - Exonic hg19 OV TCGA-5X-AA5U 2 In-Frame Intra-chr q21.33 q11.2 Seq+ 10526 ChimerSeq FusionScan TCGA_RNA-Seq ADD1-FAM193A ADD1 chr4 2845751 + FAM193A chr4 2733501 + Exonic hg19 OV TCGA-29-1693 2 5'UTR-5'UTR Intra-chr p16.3 p16.3 Seq+ 10527 ChimerSeq FusionScan TCGA_RNA-Seq SLC48A1-HECA SLC48A1 chr12 48167223 + HECA chr6 139487420 + Exonic hg19 OV TCGA-59-2348 4 In-Frame Inter-chr q13.11 q24.1 Tumor suppressor gene Seq+ 10528 ChimerSeq FusionScan TCGA_RNA-Seq PARD3-CUL2 PARD3 chr10 35103803 - CUL2 chr10 35305322 - Exonic hg19 OV TCGA-59-2348 3 Out-of-Frame Intra-chr p11.21 p11.21 Tumor suppressor gene Seq+ 10529 ChimerSeq FusionScan TCGA_RNA-Seq POR-MDH2 POR chr7 75544497 + MDH2 chr7 75684147 + Exonic hg19 OV TCGA-59-2348 3 5'UTR-CDS Intra-chr q11.23 q11.23 Seq+ 10530 ChimerSeq FusionScan TCGA_RNA-Seq RPL27A-EEF1G RPL27A chr11 8706439 + EEF1G chr11 62339373 - Exonic hg19 OV TCGA-59-2348 2 In-Frame Intra-chr p15.4 q12.3 10531 ChimerSeq FusionScan TCGA_RNA-Seq ZNF83-TARM1 ZNF83 chr19 53158813 - TARM1 chr19 54573414 - Exonic hg19 OV TCGA-59-2348 2 5'UTR-CDS Intra-chr q13.41 Transcription factor Seq+ 10532 ChimerSeq FusionScan TCGA_RNA-Seq PFKFB2-GDAP1L1 PFKFB2 chr1 207238505 + GDAP1L1 chr20 42891869 + Exonic hg19 OV TCGA-59-2348 2 Out-of-Frame Inter-chr q32.1 q13.12 Seq+ 10533 ChimerSeq FusionScan TCGA_RNA-Seq RBM47-CNOT3 RBM47 chr4 40546438 - CNOT3 chr19 54647395 + Exonic hg19 OV TCGA-59-2348 2 5'UTR-CDS Inter-chr p14 Tumor suppressor gene 10534 ChimerSeq FusionScan TCGA_RNA-Seq POR-MDH2 POR chr7 75544497 + MDH2 chr7 75686727 + Exonic hg19 OV TCGA-59-2348 2 5'UTR-CDS Intra-chr q11.23 q11.23 Seq+ 10535 ChimerSeq FusionScan TCGA_RNA-Seq QKI-MRPL14 QKI chr6 163899928 + MRPL14 chr6 44084366 - Exonic hg19 OV TCGA-13-0897 4 CDS-5'UTR Intra-chr q26 p21.1 Seq+ 10536 ChimerSeq FusionScan TCGA_RNA-Seq AMPD2-STXBP3 AMPD2 chr1 110162900 + STXBP3 chr1 109338855 + Exonic hg19 OV TCGA-13-0897 3 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 10537 ChimerSeq FusionScan TCGA_RNA-Seq PPM1A-FHIT PPM1A chr14 60716395 + FHIT chr3 61186339 - Exonic hg19 OV TCGA-13-0897 2 5'UTR-5'UTR Inter-chr q23.1 Tumor suppressor gene p14.2 Tumor suppressor gene 10538 ChimerSeq FusionScan TCGA_RNA-Seq SNHG8-SERINC2 SNHG8 chr4 119200292 + SERINC2 chr1 31905813 + Exonic hg19 OV TCGA-13-0897 2 5'UTR-CDS Inter-chr q26 p35.2 10539 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R7-PLK1 PPP1R7 chr2 242093019 + PLK1 chr16 23700558 + Exonic hg19 OV TCGA-13-0897 2 In-Frame Inter-chr q37.3 p12.2 Other:PLK Tumor suppressor gene 10540 ChimerSeq FusionScan TCGA_RNA-Seq BABAM1-CCDC61 BABAM1 chr19 17378336 + CCDC61 chr19 46519951 + Exonic hg19 OV TCGA-13-0897 2 5'UTR-CDS Intra-chr p13.11 q13.32 10541 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-CD47 CPSF6 chr12 69656342 + CD47 chr3 107766139 - Exonic hg19 OV TCGA-13-0897 2 3'UTR-CDS Inter-chr q15 q13.12 10542 ChimerSeq FusionScan TCGA_RNA-Seq KLHL20-DARS2 KLHL20 chr1 173721061 + DARS2 chr1 173825803 + Exonic hg19 OV TCGA-13-0897 2 In-Frame Intra-chr q25.1 q25.1 10543 ChimerSeq FusionScan TCGA_RNA-Seq PSMB2-C1orf94 PSMB2 chr1 36096874 - C1orf94 chr1 34673757 + Exonic hg19 OV TCGA-59-2355 31 In-Frame Intra-chr p34.3 p35.1 Seq+ 10544 ChimerSeq FusionScan TCGA_RNA-Seq FBXO34-LGALS3 FBXO34 chr14 55738255 + LGALS3 chr14 55604087 + Exonic hg19 OV TCGA-59-2355 19 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 10545 ChimerSeq FusionScan TCGA_RNA-Seq PSMB2-C1orf94 PSMB2 chr1 36096874 - C1orf94 chr1 34677810 + Exonic hg19 OV TCGA-59-2355 13 In-Frame Intra-chr p34.3 p35.1 Seq+ 10546 ChimerSeq FusionScan TCGA_RNA-Seq FAM168A-RAB6A FAM168A chr11 73308967 - RAB6A chr11 73441868 - Exonic hg19 OV TCGA-59-2355 2 5'UTR-5'UTR Intra-chr q13.4 q13.4 Seq+ 10547 ChimerSeq FusionScan TCGA_RNA-Seq FBXO34-LGALS3 FBXO34 chr14 55738255 + LGALS3 chr14 55604762 + Exonic hg19 OV TCGA-59-2355 2 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 10548 ChimerSeq FusionScan TCGA_RNA-Seq RPL32-NEXN RPL32 chr3 12881640 - NEXN chr1 78383809 + Exonic hg19 OV TCGA-59-2355 2 Out-of-Frame Inter-chr p25.2 p31.1 10549 ChimerSeq FusionScan TCGA_RNA-Seq FRAS1-MGST2 FRAS1 chr4 79322041 + MGST2 chr4 140616350 + Exonic hg19 OV TCGA-29-A5NZ 10 Out-of-Frame Intra-chr q21.21 q31.1 Seq+ 10550 ChimerSeq FusionScan TCGA_RNA-Seq PHACTR4-LRRC42 PHACTR4 chr1 28733974 + LRRC42 chr1 54426028 + Exonic hg19 OV TCGA-29-A5NZ 7 Out-of-Frame Intra-chr p35.3 Tumor suppressor gene p32.3 Seq+ 10551 ChimerSeq FusionScan TCGA_RNA-Seq DCAF5-RAD51B DCAF5 chr14 69558390 - RAD51B chr14 68934888 + Exonic hg19 OV TCGA-29-A5NZ 6 In-Frame Intra-chr q24.1 q24.1 KB Seq+ 10552 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPF-ZNF33A HNRNPF chr10 43891903 - ZNF33A chr10 38301225 + Exonic hg19 OV TCGA-29-A5NZ 5 5'UTR-5'UTR Intra-chr q11.21 p11.1 Transcription factor 10553 ChimerSeq FusionScan TCGA_RNA-Seq PHACTR4-LRRC42 PHACTR4 chr1 28764941 + LRRC42 chr1 54426028 + Exonic hg19 OV TCGA-29-A5NZ 4 Out-of-Frame Intra-chr p35.3 Tumor suppressor gene p32.3 Seq+ 10554 ChimerSeq FusionScan TCGA_RNA-Seq SPECC1L-XPNPEP3 SPECC1L chr22 24709434 + XPNPEP3 chr22 41318336 + Exonic hg19 OV TCGA-29-A5NZ 3 Out-of-Frame Intra-chr q11.23 q13.2 Seq+ 10555 ChimerSeq FusionScan TCGA_RNA-Seq EPHB2-MAST2 EPHB2 chr1 23037536 + MAST2 chr1 46468476 + Exonic hg19 OV TCGA-29-A5NZ 3 Out-of-Frame Intra-chr p36.12 Tumor suppressor gene p34.1 AGC:MAST Seq+ 10556 ChimerSeq FusionScan TCGA_RNA-Seq TRPM4-PPFIA3 TRPM4 chr19 49675365 + PPFIA3 chr19 49636257 + Exonic hg19 OV TCGA-29-A5NZ 3 Out-of-Frame Intra-chr q13.33 q13.33 Seq+ 10557 ChimerSeq FusionScan TCGA_RNA-Seq JDP2-PLEKHH1 JDP2 chr14 75904824 + PLEKHH1 chr14 68008550 + Exonic hg19 OV TCGA-29-A5NZ 3 CDS-5'UTR Intra-chr q24.3 Tumor suppressor gene Transcription factor q24.1 Seq+ 10558 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPF-ZNF33B HNRNPF chr10 43891903 - ZNF33B chr10 43127887 - Exonic hg19 OV TCGA-29-A5NZ 3 5'UTR-CDS Intra-chr q11.21 q11.21 Transcription factor Seq+ 10559 ChimerSeq FusionScan TCGA_RNA-Seq FRAS1-MGST2 FRAS1 chr4 79322041 + MGST2 chr4 140624608 + Exonic hg19 OV TCGA-29-A5NZ 2 In-Frame Intra-chr q21.21 q31.1 Seq+ 10560 ChimerSeq FusionScan TCGA_RNA-Seq C14orf43-VSX2 C14orf43 chr14 74253804 - VSX2 chr14 74707884 + Exonic hg19 OV TCGA-29-A5NZ 2 5'UTR-CDS Intra-chr q24.3 Transcription factor Seq+ 10561 ChimerSeq FusionScan TCGA_RNA-Seq MOCS1-LEMD3 MOCS1 chr6 39893421 - LEMD3 chr12 65632281 + Exonic hg19 OV TCGA-29-A5NZ 2 Out-of-Frame Inter-chr p21.2 q14.3 Seq+ 10562 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPF-ZNF33B HNRNPF chr10 43891903 - ZNF33B chr10 43127472 - Exonic hg19 OV TCGA-29-A5NZ 2 5'UTR-CDS Intra-chr q11.21 q11.21 Transcription factor Seq+ 10563 ChimerSeq FusionScan TCGA_RNA-Seq DCAF4-IFT140 DCAF4 chr14 73404778 + IFT140 chr16 1576797 - Exonic hg19 OV TCGA-29-A5NZ 2 In-Frame Inter-chr q24.2 p13.3 Seq+ 10564 ChimerSeq FusionScan TCGA_RNA-Seq C19orf57-ELAVL3 C19orf57 chr19 14000000 - ELAVL3 chr19 11577642 - Exonic hg19 OV TCGA-29-A5NZ 2 In-Frame Intra-chr p13.12 p13.2 10565 ChimerSeq FusionScan TCGA_RNA-Seq SYT7-AHNAK SYT7 chr11 61348261 - AHNAK chr11 62259303 - Exonic hg19 OV TCGA-24-0970 19 Out-of-Frame Intra-chr q12.2 q12.3 Tumor suppressor gene Seq+ 10566 ChimerSeq FusionScan TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104654982 + LHFPL3 chr7 104546633 + Exonic hg19 OV TCGA-24-0970 11 5'UTR-CDS Intra-chr q22.2 Seq+ 10567 ChimerSeq FusionScan TCGA_RNA-Seq UVRAG-FAM168A UVRAG chr11 75572825 + FAM168A chr11 73179537 - Exonic hg19 OV TCGA-24-0970 7 CDS-5'UTR Intra-chr q13.5 Tumor suppressor gene q13.4 Seq+ 10568 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-MAST3 TBL1XR1 chr3 176914908 - MAST3 chr19 18245388 + Exonic hg19 OV TCGA-24-0970 6 5'UTR-CDS Inter-chr q26.32 p13.11 AGC:MAST Seq+ 10569 ChimerSeq FusionScan TCGA_RNA-Seq UBE2Z-NPEPPS UBE2Z chr17 46993549 + NPEPPS chr17 45673718 + Exonic hg19 OV TCGA-24-0970 4 Out-of-Frame Intra-chr q21.32 q21.32 Seq+ 10570 ChimerSeq FusionScan TCGA_RNA-Seq WNK1-IQSEC3 WNK1 chr12 863490 + IQSEC3 chr12 247432 + Exonic hg19 OV TCGA-24-0970 3 In-Frame Intra-chr p13.33 Seq+ 10571 ChimerSeq FusionScan TCGA_RNA-Seq ACADS-PRKAB1 ACADS chr12 121164992 + PRKAB1 chr12 120111768 + Exonic hg19 OV TCGA-24-0970 3 Out-of-Frame Intra-chr q24.31 q24.23 Seq+ 10572 ChimerSeq FusionScan TCGA_RNA-Seq TOLLIP-AP2A2 TOLLIP chr11 1330695 - AP2A2 chr11 970168 + Exonic hg19 OV TCGA-24-0970 2 Out-of-Frame Intra-chr p15.5 p15.5 Seq+ 10573 ChimerSeq FusionScan TCGA_RNA-Seq CAPNS1-PRPF6 CAPNS1 chr19 36636776 + PRPF6 chr20 62657291 + Exonic hg19 OV TCGA-24-0970 2 In-Frame Inter-chr q13.12 q13.33 10574 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-ITGB3BP RCC1 chr1 28834672 + ITGB3BP chr1 63920639 - Exonic hg19 OV TCGA-24-0970 2 5'UTR-CDS Intra-chr p35.3 p31.3 Seq+ 10575 ChimerSeq FusionScan TCGA_RNA-Seq RPS13-PSMG3 RPS13 chr11 17098714 - PSMG3 chr7 1608996 - Exonic hg19 OV TCGA-24-0970 2 3'UTR-5'UTR Inter-chr p15.1 p22.3 10576 ChimerSeq FusionScan TCGA_RNA-Seq LLGL2-TMEM104 LLGL2 chr17 73568145 + TMEM104 chr17 72832065 + Exonic hg19 OV TCGA-24-0970 2 Out-of-Frame Intra-chr q25.1 q25.1 Seq+ 10577 ChimerSeq FusionScan TCGA_RNA-Seq LRBA-SH3D19 LRBA chr4 151935578 - SH3D19 chr4 152056284 - Exonic hg19 OV TCGA-24-0970 2 In-Frame Intra-chr q31.3 q31.3 KB Seq+ 10578 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0146-TGFB1 KIAA0146 chr8 48206619 + TGFB1 chr19 41838186 - Exonic hg19 OV TCGA-09-2051 10 Out-of-Frame Inter-chr q13.2 Tumor suppressor gene 10579 ChimerSeq FusionScan TCGA_RNA-Seq XPOT-C12orf56 XPOT chr12 64803875 + C12orf56 chr12 64746836 - Exonic hg19 OV TCGA-09-2051 8 In-Frame Intra-chr q14.2 q14.2 Seq+ 10580 ChimerSeq FusionScan TCGA_RNA-Seq FDFT1-GATA4 FDFT1 chr8 11667359 + GATA4 chr8 11612554 + Exonic hg19 OV TCGA-09-2051 8 In-Frame Intra-chr p23.1 p23.1 Tumor suppressor gene Transcription factor Seq+ 10581 ChimerSeq FusionScan TCGA_RNA-Seq KAZN-TMEM51 KAZN chr1 15251068 + TMEM51 chr1 15541390 + Exonic hg19 OV TCGA-09-2051 6 CDS-5'UTR Intra-chr p36.21 p36.21 Seq+ 10582 ChimerSeq FusionScan TCGA_RNA-Seq KAZN-TMEM51 KAZN chr1 15251068 + TMEM51 chr1 15536985 + Exonic hg19 OV TCGA-09-2051 4 CDS-5'UTR Intra-chr p36.21 p36.21 Seq+ 10583 ChimerSeq FusionScan TCGA_RNA-Seq DTX4-MS4A1 DTX4 chr11 58949935 + MS4A1 chr11 60229831 + Exonic hg19 OV TCGA-09-2051 3 CDS-5'UTR Intra-chr q12.1 q12.2 Seq+ 10584 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC17-SERINC2 ZCCHC17 chr1 31821821 + SERINC2 chr1 31883231 + Exonic hg19 OV TCGA-09-2051 3 In-Frame Intra-chr p35.2 p35.2 10585 ChimerSeq FusionScan TCGA_RNA-Seq CCDC85A-EYA2 CCDC85A chr2 56570090 + EYA2 chr20 45771697 + Exonic hg19 OV TCGA-09-2051 3 In-Frame Inter-chr p16.1 q13.12 Seq+ 10586 ChimerSeq FusionScan TCGA_RNA-Seq VTI1A-GLUD1 VTI1A chr10 114298089 + GLUD1 chr10 88827914 - Exonic hg19 OV TCGA-09-2051 2 In-Frame Intra-chr q25.2 q23.2 10587 ChimerSeq FusionScan TCGA_RNA-Seq USP53-EIF3E USP53 chr4 120138828 + EIF3E chr8 109229689 - Exonic hg19 OV TCGA-09-2051 2 5'UTR-CDS Inter-chr q26 q23.1 10588 ChimerSeq FusionScan TCGA_RNA-Seq ASMTL-P2RY8 ASMTL chrX 1553914 - P2RY8 chrY 1535475 - Exonic hg19 OV TCGA-09-2051 2 5'UTR-5'UTR Inter-chr p22.33 p22.33 Seq+ 10589 ChimerSeq FusionScan TCGA_RNA-Seq SCAF4-RUNX1 SCAF4 chr21 33057361 - RUNX1 chr21 36259393 - Exonic hg19 OV TCGA-09-2051 2 In-Frame Intra-chr q22.11 q22.12 Oncogene Tumor suppressor gene Transcription factor 10590 ChimerSeq FusionScan TCGA_RNA-Seq PARD6G-CARS2 PARD6G chr18 78005159 - CARS2 chr13 111299586 - Exonic hg19 OV TCGA-13-0919 2 Out-of-Frame Inter-chr q23 q34 10591 ChimerSeq FusionScan TCGA_RNA-Seq HSF1-RPS21 HSF1 chr8 145515556 + RPS21 chr20 60962376 + Exonic hg19 OV TCGA-13-0919 2 CDS-3'UTR Inter-chr q24.3 Transcription factor q13.33 10592 ChimerSeq FusionScan TCGA_RNA-Seq C8orf76-UBR5 C8orf76 chr8 124253469 - UBR5 chr8 103282411 - Exonic hg19 OV TCGA-13-0919 2 Out-of-Frame Intra-chr q24.13 q22.3 Oncogene 10593 ChimerSeq FusionScan TCGA_RNA-Seq GTPBP4-MAFF GTPBP4 chr10 1034467 + MAFF chr22 38609829 + Exonic hg19 OV TCGA-13-0919 2 CDS-5'UTR Inter-chr p15.3 Tumor suppressor gene q13.1 Transcription factor 10594 ChimerSeq FusionScan TCGA_RNA-Seq CALR-QSOX1 CALR chr19 13051468 + QSOX1 chr1 180165396 + Exonic hg19 OV TCGA-13-0919 2 Out-of-Frame Inter-chr p13.13 q25.2 10595 ChimerSeq FusionScan TCGA_RNA-Seq C10orf76-TRAK1 C10orf76 chr10 103815841 - TRAK1 chr3 42166911 + Exonic hg19 OV TCGA-13-0919 2 5'UTR-CDS Inter-chr q24.32 p22.1 10596 ChimerSeq FusionScan TCGA_RNA-Seq PITRM1-PFKP PITRM1 chr10 3201105 - PFKP chr10 3160973 + Exonic hg19 OV TCGA-13-0919 2 In-Frame Intra-chr p15.2 p15.2 10597 ChimerSeq FusionScan TCGA_RNA-Seq C19orf48-KLK6 C19orf48 chr19 51305473 - KLK6 chr19 51470581 - Exonic hg19 OV TCGA-13-0919 2 5'UTR-5'UTR Intra-chr q13.33 q13.41 Tumor suppressor gene 10598 ChimerSeq FusionScan TCGA_RNA-Seq EZR-PARP3 EZR chr6 159188292 - PARP3 chr3 51978793 + Exonic hg19 OV TCGA-13-0919 2 In-Frame Inter-chr q25.3 p21.2 10599 ChimerSeq FusionScan TCGA_RNA-Seq VTCN1-GNAI3 VTCN1 chr1 117712728 - GNAI3 chr1 110116358 + Exonic hg19 OV TCGA-13-0919 2 In-Frame Intra-chr p12 p13.3 10600 ChimerSeq FusionScan TCGA_RNA-Seq LFNG-MAD1L1 LFNG chr7 2559927 + MAD1L1 chr7 1976533 - Exonic hg19 OV TCGA-13-0919 2 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene 10601 ChimerSeq FusionScan TCGA_RNA-Seq KPNA6-C6orf48 KPNA6 chr1 32573735 + C6orf48 chr6 31803187 + Exonic hg19 OV TCGA-13-0913 9 CDS-3'UTR Inter-chr p35.2 Seq+ 10602 ChimerSeq FusionScan TCGA_RNA-Seq C9orf86-TMEM141 C9orf86 chr9 139702778 + TMEM141 chr9 139686702 + Exonic hg19 OV TCGA-13-0913 3 In-Frame Intra-chr q34.3 Seq+ 10603 ChimerSeq FusionScan TCGA_RNA-Seq DDX4-POLR2I DDX4 chr5 55063768 + POLR2I chr19 36605615 - Exonic hg19 OV TCGA-13-0913 2 Out-of-Frame Inter-chr q11.2 q13.12 10604 ChimerSeq FusionScan TCGA_RNA-Seq NMT2-GSTO2 NMT2 chr10 15210501 - GSTO2 chr10 106057335 + Exonic hg19 OV TCGA-13-0913 2 Out-of-Frame Intra-chr p13 q25.1 10605 ChimerSeq FusionScan TCGA_RNA-Seq ACOX1-EIF4A3 ACOX1 chr17 73974614 - EIF4A3 chr17 78109305 - Exonic hg19 OV TCGA-13-0913 2 Out-of-Frame Intra-chr q25.1 q25.3 10606 ChimerSeq FusionScan TCGA_RNA-Seq PACS2-MTA1 PACS2 chr14 105814917 + MTA1 chr14 105936177 + Exonic hg19 OV TCGA-24-1419 4 In-Frame Intra-chr q32.33 q32.33 Seq+ 10607 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152480271 + Exonic hg19 OV TCGA-24-1419 2 Out-of-Frame Intra-chr q36.1 Seq+ 10608 ChimerSeq FusionScan TCGA_RNA-Seq GMEB1-KDM3A GMEB1 chr1 29010252 + KDM3A chr2 86707289 + Exonic hg19 OV TCGA-24-1419 2 Out-of-Frame Inter-chr p35.3 Transcription factor p11.2 Tumor suppressor gene 10609 ChimerSeq FusionScan TCGA_RNA-Seq GRAMD1A-FXYD3 GRAMD1A chr19 35505291 + FXYD3 chr19 35613668 + Exonic hg19 OV TCGA-24-1419 2 In-Frame Intra-chr q13.11 q13.12 10610 ChimerSeq FusionScan TCGA_RNA-Seq PACS2-NOC4L PACS2 chr14 105851324 + NOC4L chr12 132635525 + Exonic hg19 OV TCGA-24-1419 2 Out-of-Frame Inter-chr q32.33 q24.33 10611 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D17-WASL TBC1D17 chr19 50381829 + WASL chr7 123324634 - Exonic hg19 OV TCGA-23-1029 4 Out-of-Frame Inter-chr q13.33 q31.32 10612 ChimerSeq FusionScan TCGA_RNA-Seq SPRED3-RFXANK SPRED3 chr19 38885116 + RFXANK chr19 19304747 + Exonic hg19 OV TCGA-23-1029 2 3'UTR-5'UTR Intra-chr q13.2 p13.11 10613 ChimerSeq FusionScan TCGA_RNA-Seq CELSR1-STK24 CELSR1 chr22 46829289 - STK24 chr13 99127612 - Exonic hg19 OV TCGA-23-1029 2 In-Frame Inter-chr q13.31 q32.2 10614 ChimerSeq FusionScan TCGA_RNA-Seq ATP5C1-KIN ATP5C1 chr10 7842054 + KIN chr10 7820982 - Exonic hg19 OV TCGA-23-1029 2 In-Frame Intra-chr p14 p14 Transcription factor 10615 ChimerSeq FusionScan TCGA_RNA-Seq RBM47-SP1 RBM47 chr4 40546438 - SP1 chr12 53775442 + Exonic hg19 OV TCGA-23-1029 2 5'UTR-5'UTR Inter-chr p14 q13.13 Transcription factor 10616 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC17-SERINC2 ZCCHC17 chr1 31821821 + SERINC2 chr1 31883231 + Exonic hg19 OV TCGA-23-1029 2 In-Frame Intra-chr p35.2 p35.2 10617 ChimerSeq FusionScan TCGA_RNA-Seq OSBP2-CHCHD3 OSBP2 chr22 31266669 + CHCHD3 chr7 132470421 - Exonic hg19 OV TCGA-24-1435 10 In-Frame Inter-chr q12.2 q33 Transcription factor Seq+ 10618 ChimerSeq FusionScan TCGA_RNA-Seq PGAM5-CCL28 PGAM5 chr12 133287653 + CCL28 chr5 43388578 - Exonic hg19 OV TCGA-24-1435 7 Out-of-Frame Inter-chr q24.33 p12 Seq+ 10619 ChimerSeq FusionScan TCGA_RNA-Seq CRKL-LZTR1 CRKL chr22 21272533 + LZTR1 chr22 21337315 + Exonic hg19 OV TCGA-24-1435 3 In-Frame Intra-chr q11.21 Oncogene q11.21 10620 ChimerSeq FusionScan TCGA_RNA-Seq METAP2-VEZT METAP2 chr12 95869954 + VEZT chr12 95688047 + Exonic hg19 OV TCGA-24-1435 3 In-Frame Intra-chr q22 q22 Tumor suppressor gene Seq+ 10621 ChimerSeq FusionScan TCGA_RNA-Seq SLC6A6-STAU2 SLC6A6 chr3 14489324 + STAU2 chr8 74601048 - Exonic hg19 OV TCGA-24-1435 3 Out-of-Frame Inter-chr p25.1 q21.11 10622 ChimerSeq FusionScan TCGA_RNA-Seq DOT1L-PTPN7 DOT1L chr19 2202778 + PTPN7 chr1 202121827 - Exonic hg19 OV TCGA-24-1435 2 Out-of-Frame Inter-chr p13.3 Oncogene Transcription factor q32.1 10623 ChimerSeq FusionScan TCGA_RNA-Seq RPL36-ALG3 RPL36 chr19 5691464 + ALG3 chr3 183966759 - Exonic hg19 OV TCGA-24-1435 2 CDS-5'UTR Inter-chr p13.3 q27.1 10624 ChimerSeq FusionScan TCGA_RNA-Seq CHSY1-SELS CHSY1 chr15 101775286 - SELS chr15 101815566 - Exonic hg19 OV TCGA-24-1435 2 Out-of-Frame Intra-chr q26.3 10625 ChimerSeq FusionScan TCGA_RNA-Seq FDPS-CLK2 FDPS chr1 155282186 + CLK2 chr1 155234565 - Exonic hg19 OV TCGA-24-1435 2 In-Frame Intra-chr q22 q22 CMGC:CLK 10626 ChimerSeq FusionScan TCGA_RNA-Seq SLC3A2-DLGAP4 SLC3A2 chr11 62623853 + DLGAP4 chr20 35152652 + Exonic hg19 OV TCGA-24-1435 2 In-Frame Inter-chr q12.3 q11.23 Seq+ 10627 ChimerSeq FusionScan TCGA_RNA-Seq GANAB-SSRP1 GANAB chr11 62414033 - SSRP1 chr11 57102714 - Exonic hg19 OV TCGA-24-2290 11 CDS-5'UTR Intra-chr q12.3 Tumor suppressor gene q12.1 Seq+ 10628 ChimerSeq FusionScan TCGA_RNA-Seq EIF2A-ANKUB1 EIF2A chr3 150270212 + ANKUB1 chr3 149479400 - Exonic hg19 OV TCGA-24-2290 4 In-Frame Intra-chr q25.1 q25.1 Seq+ 10629 ChimerSeq FusionScan TCGA_RNA-Seq NUP160-AGBL2 NUP160 chr11 47869399 - AGBL2 chr11 47727469 - Exonic hg19 OV TCGA-24-2290 3 Out-of-Frame Intra-chr p11.2 p11.2 Seq+ 10630 ChimerSeq FusionScan TCGA_RNA-Seq C6orf106-ZFAND3 C6orf106 chr6 34622401 - ZFAND3 chr6 38050167 + Exonic hg19 OV TCGA-24-2290 2 In-Frame Intra-chr p21.31 p21.2 10631 ChimerSeq FusionScan TCGA_RNA-Seq AGFG1-TAF1A AGFG1 chr2 228388641 + TAF1A chr1 222737467 - Exonic hg19 OV TCGA-24-2290 2 In-Frame Inter-chr q36.3 q41 10632 ChimerSeq FusionScan TCGA_RNA-Seq NUP160-AGBL2 NUP160 chr11 47869399 - AGBL2 chr11 47726280 - Exonic hg19 OV TCGA-24-2290 2 Out-of-Frame Intra-chr p11.2 p11.2 Seq+ 10633 ChimerSeq FusionScan TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61665879 - ANK3 chr10 61802517 - Exonic hg19 OV TCGA-24-2033 28 In-Frame Intra-chr q21.2 q21.2 Seq+ 10634 ChimerSeq FusionScan TCGA_RNA-Seq GADD45GIP1-DAND5 GADD45GIP1 chr19 13067676 - DAND5 chr19 13084202 + Exonic hg19 OV TCGA-24-2033 6 Out-of-Frame Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 10635 ChimerSeq FusionScan TCGA_RNA-Seq PAK1-NARS2 PAK1 chr11 77184596 - NARS2 chr11 78189729 - Exonic hg19 OV TCGA-24-2033 4 5'UTR-CDS Intra-chr q14.1 STE:STE20 q14.1 Seq+ 10636 ChimerSeq FusionScan TCGA_RNA-Seq DDX39A-EMR3 DDX39A chr19 14523824 - EMR3 chr19 14762016 - Exonic hg19 OV TCGA-24-2033 4 In-Frame Intra-chr p13.12 Seq+ 10637 ChimerSeq FusionScan TCGA_RNA-Seq NXN-IL6R NXN chr17 882558 - IL6R chr1 154406994 + Exonic hg19 OV TCGA-24-2033 3 Out-of-Frame Inter-chr p13.3 q21.3 Seq+ 10638 ChimerSeq FusionScan TCGA_RNA-Seq SRSF11-C11orf49 SRSF11 chr1 70694238 + C11orf49 chr11 47008758 + Exonic hg19 OV TCGA-24-2033 2 In-Frame Inter-chr p31.1 p11.2 10639 ChimerSeq FusionScan TCGA_RNA-Seq MAP4K2-FXR2 MAP4K2 chr11 64563744 - FXR2 chr17 7506320 - Exonic hg19 OV TCGA-24-2033 2 In-Frame Inter-chr q13.1 p13.1 10640 ChimerSeq FusionScan TCGA_RNA-Seq BAIAP2L1-ELK4 BAIAP2L1 chr7 97984353 - ELK4 chr1 205589966 - Exonic hg19 OV TCGA-24-2033 2 Out-of-Frame Inter-chr q22.1 q32.1 Transcription factor 10641 ChimerSeq FusionScan TCGA_RNA-Seq IDH2-ZNF710 IDH2 chr15 90645507 - ZNF710 chr15 90610341 + Exonic hg19 OV TCGA-25-1626 7 CDS-5'UTR Intra-chr q26.1 Oncogene q26.1 Transcription factor Seq+ 10642 ChimerSeq FusionScan TCGA_RNA-Seq KRI1-DNM2 KRI1 chr19 10672342 - DNM2 chr19 10916591 + Exonic hg19 OV TCGA-25-1626 3 In-Frame Intra-chr p13.2 p13.2 Seq+ 10643 ChimerSeq FusionScan TCGA_RNA-Seq PALLD-NFE2L2 PALLD chr4 169825057 + NFE2L2 chr2 178098999 - Exonic hg19 OV TCGA-25-1626 2 In-Frame Inter-chr q32.3 q31.2 Oncogene Transcription factor 10644 ChimerSeq FusionScan TCGA_RNA-Seq PNISR-SMAP2 PNISR chr6 99873090 - SMAP2 chr1 40878687 + Exonic hg19 OV TCGA-25-1626 2 5'UTR-CDS Inter-chr q16.2 p34.2 10645 ChimerSeq FusionScan TCGA_RNA-Seq FKRP-TAC4 FKRP chr19 47251922 + TAC4 chr17 47921519 - Exonic hg19 OV TCGA-25-1626 2 5'UTR-CDS Inter-chr q13.32 q21.33 Seq+ 10646 ChimerSeq FusionScan TCGA_RNA-Seq MED16-POLR2E MED16 chr19 879936 - POLR2E chr19 1089550 - Exonic hg19 OV TCGA-13-A5FT 21 In-Frame Intra-chr p13.3 p13.3 Seq+ 10647 ChimerSeq FusionScan TCGA_RNA-Seq NCOR2-NPEPPS NCOR2 chr12 125051853 - NPEPPS chr17 45646782 + Exonic hg19 OV TCGA-13-A5FT 12 5'UTR-CDS Inter-chr q24.31 q21.32 10648 ChimerSeq FusionScan TCGA_RNA-Seq TMEM30A-FILIP1 TMEM30A chr6 75994117 - FILIP1 chr6 76124694 - Exonic hg19 OV TCGA-13-A5FT 12 CDS-5'UTR Intra-chr q14.1 q14.1 Seq+ 10649 ChimerSeq FusionScan TCGA_RNA-Seq PRPF31-CACNG7 PRPF31 chr19 54622013 + CACNG7 chr19 54445289 + Exonic hg19 OV TCGA-13-A5FT 8 Out-of-Frame Intra-chr q13.42 Seq+ 10650 ChimerSeq FusionScan TCGA_RNA-Seq UVRAG-SERPINH1 UVRAG chr11 75623083 + SERPINH1 chr11 75277360 + Exonic hg19 OV TCGA-13-A5FT 8 CDS-5'UTR Intra-chr q13.5 Tumor suppressor gene q13.5 Seq+ 10651 ChimerSeq FusionScan TCGA_RNA-Seq PRPF31-CACNG7 PRPF31 chr19 54622013 + CACNG7 chr19 54444723 + Exonic hg19 OV TCGA-13-A5FT 6 In-Frame Intra-chr q13.42 Seq+ 10652 ChimerSeq FusionScan TCGA_RNA-Seq CCT3-ARHGEF11 CCT3 chr1 156304503 - ARHGEF11 chr1 156931567 - Exonic hg19 OV TCGA-13-A5FT 6 In-Frame Intra-chr q22 q23.1 Seq+ 10653 ChimerSeq FusionScan TCGA_RNA-Seq PDXDC1-NOB1 PDXDC1 chr16 15069077 + NOB1 chr16 69788629 - Exonic hg19 OV TCGA-13-A5FT 5 In-Frame Intra-chr p13.11 q22.1 10654 ChimerSeq FusionScan TCGA_RNA-Seq GRK6-ZNF346 GRK6 chr5 176863531 + ZNF346 chr5 176471389 + Exonic hg19 OV TCGA-13-A5FT 4 In-Frame Intra-chr q35.3 q35.2 Transcription factor Seq+ 10655 ChimerSeq FusionScan TCGA_RNA-Seq NCOR2-PIP4K2B NCOR2 chr12 125051853 - PIP4K2B chr17 36943173 - Exonic hg19 OV TCGA-13-A5FT 3 5'UTR-CDS Inter-chr q24.31 q12 Seq+ 10656 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 OV TCGA-13-A5FT 3 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 10657 ChimerSeq FusionScan TCGA_RNA-Seq RNF123-ARIH2 RNF123 chr3 49744331 + ARIH2 chr3 49011131 + Exonic hg19 OV TCGA-13-A5FT 3 Out-of-Frame Intra-chr p21.31 p21.31 Seq+ 10658 ChimerSeq FusionScan TCGA_RNA-Seq CRK-SLC43A2 CRK chr17 1359170 - SLC43A2 chr17 1496573 - Exonic hg19 OV TCGA-13-A5FT 2 Out-of-Frame Intra-chr p13.3 Seq+ 10659 ChimerSeq FusionScan TCGA_RNA-Seq XRCC6-L3MBTL2 XRCC6 chr22 42054356 + L3MBTL2 chr22 41621797 + Exonic hg19 OV TCGA-13-A5FT 2 Out-of-Frame Intra-chr q13.2 q13.2 Seq+ 10660 ChimerSeq FusionScan TCGA_RNA-Seq TMEM48-MTMR12 TMEM48 chr1 54262571 - MTMR12 chr5 32274228 - Exonic hg19 OV TCGA-13-A5FT 2 In-Frame Inter-chr p13.3 10661 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152480271 + Exonic hg19 OV TCGA-13-A5FT 2 Out-of-Frame Intra-chr q36.1 Seq+ 10662 ChimerSeq FusionScan TCGA_RNA-Seq CDC42BPB-PPP1R13B CDC42BPB chr14 103406382 - PPP1R13B chr14 104216271 - Exonic hg19 OV TCGA-13-A5FT 2 Out-of-Frame Intra-chr q32.32 q32.33 10663 ChimerSeq FusionScan TCGA_RNA-Seq SNHG4-CRTAC1 SNHG4 chr5 138614097 + CRTAC1 chr10 99696123 - Exonic hg19 OV TCGA-13-A5FT 2 5'UTR-CDS Inter-chr q31.2 q24.2 10664 ChimerSeq FusionScan TCGA_RNA-Seq PSAT1-MICB PSAT1 chr9 80932720 + MICB chr6 31473393 + Exonic hg19 OV TCGA-13-A5FT 2 CDS-3'UTR Inter-chr q21.2 Seq+ 10665 ChimerSeq FusionScan TCGA_RNA-Seq NCOR2-DHX37 NCOR2 chr12 124970986 - DHX37 chr12 125470811 - Exonic hg19 OV TCGA-13-A5FT 2 Out-of-Frame Intra-chr q24.31 q24.31 Seq+ 10666 ChimerSeq FusionScan TCGA_RNA-Seq SP1-C12orf10 SP1 chr12 53803345 + C12orf10 chr12 53699691 + Exonic hg19 OV TCGA-13-A5FT 2 Out-of-Frame Intra-chr q13.13 Transcription factor q13.13 Seq+ 10667 ChimerSeq FusionScan TCGA_RNA-Seq EZH1-MAP3K14 EZH1 chr17 40861863 - MAP3K14 chr17 43368131 - Exonic hg19 OV TCGA-13-A5FT 2 CDS-5'UTR Intra-chr q21.2 Tumor suppressor gene q21.31 Seq+ 10668 ChimerSeq FusionScan TCGA_RNA-Seq ENTPD5-FBXO18 ENTPD5 chr14 74477793 - FBXO18 chr10 5944982 + Exonic hg19 OV TCGA-13-A5FT 2 5'UTR-5'UTR Inter-chr q24.3 p15.1 10669 ChimerSeq FusionScan TCGA_RNA-Seq DAGLA-LINC00301 DAGLA chr11 61447976 + LINC00301 chr11 60388493 + Exonic hg19 OV TCGA-13-A5FT 2 5'UTR-5'UTR Intra-chr q12.2 q12.2 Seq+ 10670 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1-YIPF7 WHSC1 chr4 1962878 + YIPF7 chr4 44652118 - Exonic hg19 OV TCGA-23-1123 7 Out-of-Frame Intra-chr Oncogene p12 Seq+ 10671 ChimerSeq FusionScan TCGA_RNA-Seq PANK2-HSPA12B PANK2 chr20 3870375 + HSPA12B chr20 3719304 + Exonic hg19 OV TCGA-23-1123 7 CDS-5'UTR Intra-chr p13 p13 Seq+ 10672 ChimerSeq FusionScan TCGA_RNA-Seq LSM7-GNG7 LSM7 chr19 2328385 - GNG7 chr19 2520723 - Exonic hg19 OV TCGA-23-1123 6 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 10673 ChimerSeq FusionScan TCGA_RNA-Seq BAIAP2-RPTOR BAIAP2 chr17 79079946 + RPTOR chr17 78914295 + Exonic hg19 OV TCGA-23-1123 2 Out-of-Frame Intra-chr q25.3 q25.3 Seq+ 10674 ChimerSeq FusionScan TCGA_RNA-Seq SPRED3-RFXANK SPRED3 chr19 38885116 + RFXANK chr19 19304747 + Exonic hg19 OV TCGA-23-1123 2 3'UTR-5'UTR Intra-chr q13.2 p13.11 10675 ChimerSeq FusionScan TCGA_RNA-Seq NPLOC4-FASN NPLOC4 chr17 79564270 - FASN chr17 80042829 - Exonic hg19 OV TCGA-23-1123 2 Out-of-Frame Intra-chr q25.3 q25.3 Seq+ 10676 ChimerSeq FusionScan TCGA_RNA-Seq TIMM17B-PQBP1 TIMM17B chrX 48755349 - PQBP1 chrX 48755212 + Exonic hg19 OV TCGA-23-1123 2 5'UTR-5'UTR Intra-chr p11.23 p11.23 Seq+ 10677 ChimerSeq FusionScan TCGA_RNA-Seq SMARCA4-LDLR SMARCA4 chr19 11071850 + LDLR chr19 11238683 + Exonic hg19 OV TCGA-23-1123 2 5'UTR-CDS Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 10678 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1-YIPF7 WHSC1 chr4 1962878 + YIPF7 chr4 44638102 - Exonic hg19 OV TCGA-23-1123 2 Out-of-Frame Intra-chr Oncogene p12 Seq+ 10679 ChimerSeq FusionScan TCGA_RNA-Seq VPS37C-AHNAK VPS37C chr11 60928862 - AHNAK chr11 62259303 - Exonic hg19 OV TCGA-13-0920 5 5'UTR-CDS Intra-chr q12.2 q12.3 Tumor suppressor gene Seq+ 10680 ChimerSeq FusionScan TCGA_RNA-Seq WASF2-IFI6 WASF2 chr1 27816496 - IFI6 chr1 27995857 - Exonic hg19 OV TCGA-13-0920 3 5'UTR-5'UTR Intra-chr p36.11 p35.3 Seq+ 10681 ChimerSeq FusionScan TCGA_RNA-Seq DTD1-TTC29 DTD1 chr20 18608877 + TTC29 chr4 147628703 - Exonic hg19 OV TCGA-13-0920 3 Out-of-Frame Inter-chr p11.23 q31.22 Seq+ 10682 ChimerSeq FusionScan TCGA_RNA-Seq COL23A1-FAM193B COL23A1 chr5 177987682 - FAM193B chr5 176947182 - Exonic hg19 OV TCGA-24-2024 9 CDS-3'UTR Intra-chr q35.3 q35.3 Seq+ 10683 ChimerSeq FusionScan TCGA_RNA-Seq PIAS3-REN PIAS3 chr1 145576102 + REN chr1 204131291 - Exonic hg19 OV TCGA-24-2024 4 Out-of-Frame Intra-chr q21.1 q32.1 Seq+ 10684 ChimerSeq FusionScan TCGA_RNA-Seq SPRED3-RFXANK SPRED3 chr19 38885116 + RFXANK chr19 19304747 + Exonic hg19 OV TCGA-24-2024 3 3'UTR-5'UTR Intra-chr q13.2 p13.11 10685 ChimerSeq FusionScan TCGA_RNA-Seq DCAF6-PBX1 DCAF6 chr1 167974031 + PBX1 chr1 164761730 + Exonic hg19 OV TCGA-24-2024 3 In-Frame Intra-chr q24.2 q23.3 Oncogene Transcription factor 10686 ChimerSeq FusionScan TCGA_RNA-Seq USP14-LARP1B USP14 chr18 166819 + LARP1B chr4 129028293 + Exonic hg19 OV TCGA-24-2024 2 In-Frame Inter-chr p11.32 q28.2 10687 ChimerSeq FusionScan TCGA_RNA-Seq NUSAP1-OIP5 NUSAP1 chr15 41669502 + OIP5 chr15 41611978 - Exonic hg19 OV TCGA-24-2024 2 In-Frame Intra-chr q15.1 q15.1 10688 ChimerSeq FusionScan TCGA_RNA-Seq CYSTM1-COG7 CYSTM1 chr5 139574237 + COG7 chr16 23404668 - Exonic hg19 OV TCGA-24-2024 2 Out-of-Frame Inter-chr q31.3 p12.2 10689 ChimerSeq FusionScan TCGA_RNA-Seq METRNL-BACE2 METRNL chr17 81043199 + BACE2 chr21 42609439 + Exonic hg19 OV TCGA-24-2024 2 Out-of-Frame Inter-chr q22.2 10690 ChimerSeq FusionScan TCGA_RNA-Seq ACAP2-APOD ACAP2 chr3 195101737 - APOD chr3 195300842 - Exonic hg19 OV TCGA-24-2262 19 In-Frame Intra-chr q29 q29 Seq+ 10691 ChimerSeq FusionScan TCGA_RNA-Seq SDHAF2-CD5 SDHAF2 chr11 61197654 + CD5 chr11 60891355 + Exonic hg19 OV TCGA-24-2262 13 Out-of-Frame Intra-chr q12.2 q12.2 Seq+ 10692 ChimerSeq FusionScan TCGA_RNA-Seq SDHAF2-CD5 SDHAF2 chr11 61197654 + CD5 chr11 60890378 + Exonic hg19 OV TCGA-24-2262 11 Out-of-Frame Intra-chr q12.2 q12.2 Seq+ 10693 ChimerSeq FusionScan TCGA_RNA-Seq UBE2O-RHBDF2 UBE2O chr17 74448806 - RHBDF2 chr17 74477627 - Exonic hg19 OV TCGA-24-2262 10 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 10694 ChimerSeq FusionScan TCGA_RNA-Seq PAK1-GAB2 PAK1 chr11 77184596 - GAB2 chr11 77991947 - Exonic hg19 OV TCGA-24-2262 3 5'UTR-5'UTR Intra-chr q14.1 STE:STE20 q14.1 Seq+ 10695 ChimerSeq FusionScan TCGA_RNA-Seq CASC4-YIF1A CASC4 chr15 44581554 + YIF1A chr11 66055387 - Exonic hg19 OV TCGA-24-2262 3 In-Frame Inter-chr q15.3 q13.2 Seq+ 10696 ChimerSeq FusionScan TCGA_RNA-Seq POLR2C-HS3ST4 POLR2C chr16 57496990 + HS3ST4 chr16 26146932 + Exonic hg19 OV TCGA-24-2262 3 Out-of-Frame Intra-chr q21 p12.1 Seq+ 10697 ChimerSeq FusionScan TCGA_RNA-Seq VTI1A-GTF2H5 VTI1A chr10 114298089 + GTF2H5 chr6 158613008 + Exonic hg19 OV TCGA-24-2262 3 Out-of-Frame Inter-chr q25.2 q25.3 Seq+ 10698 ChimerSeq FusionScan TCGA_RNA-Seq ADAM10-MYO1E ADAM10 chr15 59009775 - MYO1E chr15 59480415 - Exonic hg19 OV TCGA-24-2262 2 3'UTR-CDS Intra-chr q21.3 q22.2 Seq+ 10699 ChimerSeq FusionScan TCGA_RNA-Seq TRADD-GFOD2 TRADD chr16 67193740 - GFOD2 chr16 67719705 - Exonic hg19 OV TCGA-24-2262 2 5'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 10700 ChimerSeq FusionScan TCGA_RNA-Seq USP54-CASC2 USP54 chr10 75296026 - CASC2 chr10 119857706 + Exonic hg19 OV TCGA-24-2262 2 CDS-5'UTR Intra-chr q22.2 q26.11 Tumor suppressor gene Seq+ 10701 ChimerSeq FusionScan TCGA_RNA-Seq C16orf57-MAPKAPK5 C16orf57 chr16 58051343 + MAPKAPK5 chr12 112308888 + Exonic hg19 OV TCGA-24-2262 2 In-Frame Inter-chr q24.12 CAMK:MAPKAPK 10702 ChimerSeq FusionScan TCGA_RNA-Seq PCBP2-FGR PCBP2 chr12 53865591 + FGR chr1 27951662 - Exonic hg19 OV TCGA-24-2262 2 CDS-5'UTR Inter-chr q13.13 p35.3 TK:Src Seq+ 10703 ChimerSeq FusionScan TCGA_RNA-Seq SRM-MTOR SRM chr1 11118856 - MTOR chr1 11227574 - Exonic hg19 OV TCGA-24-2262 2 Out-of-Frame Intra-chr p36.22 TK:Src p36.22 Oncogene Seq+ 10704 ChimerSeq FusionScan TCGA_RNA-Seq C16orf57-MAPKAPK5 C16orf57 chr16 58051343 + MAPKAPK5 chr12 112308074 + Exonic hg19 OV TCGA-24-2262 2 In-Frame Inter-chr q24.12 CAMK:MAPKAPK 10705 ChimerSeq FusionScan TCGA_RNA-Seq USP54-CASC2 USP54 chr10 75296026 - CASC2 chr10 119966033 + Exonic hg19 OV TCGA-24-2262 2 CDS-5'UTR Intra-chr q22.2 q26.11 Tumor suppressor gene Seq+ 10706 ChimerSeq FusionScan TCGA_RNA-Seq MIEN1-WIPF2 MIEN1 chr17 37886446 - WIPF2 chr17 38412642 + Exonic hg19 OV TCGA-30-1853 3 CDS-5'UTR Intra-chr q12 q21.2 Seq+ 10707 ChimerSeq FusionScan TCGA_RNA-Seq SLC25A32-SMYD3 SLC25A32 chr8 104419861 - SMYD3 chr1 246518396 - Exonic hg19 OV TCGA-29-1770 4 In-Frame Inter-chr q22.3 q44 Transcription factor Seq+ 10708 ChimerSeq FusionScan TCGA_RNA-Seq RPA2-STX12 RPA2 chr1 28240573 - STX12 chr1 28136756 + Exonic hg19 OV TCGA-29-1770 4 In-Frame Intra-chr p35.3 p35.3 Seq+ 10709 ChimerSeq FusionScan TCGA_RNA-Seq PXN-EP400 PXN chr12 120703419 - EP400 chr12 132472249 + Exonic hg19 OV TCGA-29-1770 2 Out-of-Frame Intra-chr q24.23 q24.33 Oncogene 10710 ChimerSeq FusionScan TCGA_RNA-Seq EP300-PCBP3 EP300 chr22 41558783 + PCBP3 chr21 47330815 + Exonic hg19 OV TCGA-24-1546 7 Out-of-Frame Inter-chr q13.2 Oncogene q22.3 Seq+ 10711 ChimerSeq FusionScan TCGA_RNA-Seq HIPK2-DENND2A HIPK2 chr7 139477403 - DENND2A chr7 140287580 - Exonic hg19 OV TCGA-24-1546 3 Out-of-Frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Seq+ 10712 ChimerSeq FusionScan TCGA_RNA-Seq UBR1-TMEM62 UBR1 chr15 43398139 - TMEM62 chr15 43427709 + Exonic hg19 OV TCGA-24-1546 2 Out-of-Frame Intra-chr q15.2 q15.2 10713 ChimerSeq FusionScan TCGA_RNA-Seq AVEN-GOLGA8A AVEN chr15 34295232 - GOLGA8A chr15 34699936 - Exonic hg19 OV TCGA-24-1546 2 CDS-3'UTR Intra-chr q14 q14 Seq+ 10714 ChimerSeq FusionScan TCGA_RNA-Seq MEIS1-SUPT3H MEIS1 chr2 66739426 + SUPT3H chr6 44900500 - Exonic hg19 OV TCGA-24-1546 2 In-Frame Inter-chr p14 Transcription factor p21.1 10715 ChimerSeq FusionScan TCGA_RNA-Seq COX6B1-KLF12 COX6B1 chr19 36139305 + KLF12 chr13 74289662 - Exonic hg19 OV TCGA-24-1546 2 5'UTR-CDS Inter-chr q13.12 q22.1 Transcription factor 10716 ChimerSeq FusionScan TCGA_RNA-Seq NXF1-KLK10 NXF1 chr11 62567848 - KLK10 chr19 51520546 - Exonic hg19 OV TCGA-24-1546 2 Out-of-Frame Inter-chr q12.3 q13.41 Tumor suppressor gene 10717 ChimerSeq FusionScan TCGA_RNA-Seq TMX2-CTNND1 TMX2 chr11 57505140 + CTNND1 chr11 57563048 + Exonic hg19 OV TCGA-24-1546 2 Out-of-Frame Intra-chr q12.1 q12.1 Tumor suppressor gene 10718 ChimerSeq FusionScan TCGA_RNA-Seq ARF1-GUK1 ARF1 chr1 228270466 + GUK1 chr1 228333211 + Exonic hg19 OV TCGA-25-1630 33 5'UTR-5'UTR Intra-chr q42.13 Tumor suppressor gene q42.13 10719 ChimerSeq FusionScan TCGA_RNA-Seq BRSK1-COX6B1 BRSK1 chr19 55816954 + COX6B1 chr19 36149495 + Exonic hg19 OV TCGA-24-1544 12 In-Frame Intra-chr q13.42 CAMK:CAMKL Tumor suppressor gene q13.12 Seq+ 10720 ChimerSeq FusionScan TCGA_RNA-Seq RHPN2-GRIN2D RHPN2 chr19 33481419 - GRIN2D chr19 48919258 + Exonic hg19 OV TCGA-24-1544 12 In-Frame Intra-chr q13.11 q13.33 Seq+ 10721 ChimerSeq FusionScan TCGA_RNA-Seq AGAP1-PINX1 AGAP1 chr2 236403493 + PINX1 chr8 10683754 - Exonic hg19 OV TCGA-24-1544 4 In-Frame Inter-chr q37.2 p23.1 Tumor suppressor gene Seq+ 10722 ChimerSeq FusionScan TCGA_RNA-Seq THRAP3-EIF2C1 THRAP3 chr1 36690106 + EIF2C1 chr1 36367074 + Exonic hg19 OV TCGA-24-1544 3 5'UTR-CDS Intra-chr p34.3 10723 ChimerSeq FusionScan TCGA_RNA-Seq PAK4-ZNF837 PAK4 chr19 39616559 + ZNF837 chr19 58881295 - Exonic hg19 OV TCGA-24-1544 2 5'UTR-5'UTR Intra-chr q13.2 STE:STE20 q13.43 Transcription factor Seq+ 10724 ChimerSeq FusionScan TCGA_RNA-Seq LTBP4-RBM39 LTBP4 chr19 41114509 + RBM39 chr20 34301018 - Exonic hg19 OV TCGA-24-1544 2 In-Frame Inter-chr q13.2 q11.22 10725 ChimerSeq FusionScan TCGA_RNA-Seq SPRED3-RFXANK SPRED3 chr19 38885116 + RFXANK chr19 19304747 + Exonic hg19 OV TCGA-24-0966 4 3'UTR-5'UTR Intra-chr q13.2 p13.11 10726 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT6 NDUFA11 chr19 5896463 - FUT6 chr19 5832590 - Exonic hg19 OV TCGA-24-0966 2 CDS-5'UTR Intra-chr p13.3 p13.3 10727 ChimerSeq FusionScan TCGA_RNA-Seq LCMT1-AQP8 LCMT1 chr16 25182126 + AQP8 chr16 25238388 + Exonic hg19 OV TCGA-24-0966 2 CDS-5'UTR Intra-chr p12.1 p12.1 10728 ChimerSeq FusionScan TCGA_RNA-Seq PACS1-GNA15 PACS1 chr11 65838313 + GNA15 chr19 3148588 + Exonic hg19 OV TCGA-36-1580 2 Out-of-Frame Inter-chr q13.1 p13.3 10729 ChimerSeq FusionScan TCGA_RNA-Seq CIAO1-TMEM127 CIAO1 chr2 96932227 + TMEM127 chr2 96920735 - Exonic hg19 OV TCGA-WR-A838 33 In-Frame Intra-chr q11.2 q11.2 Tumor suppressor gene Seq+ 10730 ChimerSeq FusionScan TCGA_RNA-Seq POLB-ASH2L POLB chr8 42227506 + ASH2L chr8 37976787 + Exonic hg19 OV TCGA-WR-A838 3 In-Frame Intra-chr p11.21 p11.23 Seq+ 10731 ChimerSeq FusionScan TCGA_RNA-Seq CYP4F11-FAM95B1 CYP4F11 chr19 16038021 - FAM95B1 chr9 42470479 + Exonic hg19 OV TCGA-WR-A838 2 CDS-5'UTR Inter-chr p13.12 p11.2 10732 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT6 NDUFA11 chr19 5896463 - FUT6 chr19 5832590 - Exonic hg19 OV TCGA-WR-A838 2 CDS-5'UTR Intra-chr p13.3 p13.3 10733 ChimerSeq FusionScan TCGA_RNA-Seq BIRC6-C2orf28 BIRC6 chr2 32658872 + C2orf28 chr2 27438188 + Exonic hg19 OV TCGA-WR-A838 2 Out-of-Frame Intra-chr p22.3 10734 ChimerSeq FusionScan TCGA_RNA-Seq WAC-SH3BGRL3 WAC chr10 28872434 + SH3BGRL3 chr1 26607255 + Exonic hg19 OV TCGA-WR-A838 2 In-Frame Inter-chr p12.1 p36.11 10735 ChimerSeq FusionScan TCGA_RNA-Seq FBXL5-PROM1 FBXL5 chr4 15613888 - PROM1 chr4 16020163 - Exonic hg19 OV TCGA-31-1951 12 In-Frame Intra-chr p15.32 p15.32 Seq+ 10736 ChimerSeq FusionScan TCGA_RNA-Seq ANAPC7-PDE11A ANAPC7 chr12 110832905 - PDE11A chr2 178592900 - Exonic hg19 OV TCGA-31-1951 11 In-Frame Inter-chr q24.11 q31.2 Seq+ 10737 ChimerSeq FusionScan TCGA_RNA-Seq PERP-TULP1 PERP chr6 138428263 - TULP1 chr6 35477705 - Exonic hg19 OV TCGA-31-1951 11 In-Frame Intra-chr q23.3 p21.31 Seq+ 10738 ChimerSeq FusionScan TCGA_RNA-Seq CTNND1-TMX2 CTNND1 chr11 57561553 + TMX2 chr11 57505079 + Exonic hg19 OV TCGA-31-1951 10 In-Frame Intra-chr q12.1 Tumor suppressor gene q12.1 Seq+ 10739 ChimerSeq FusionScan TCGA_RNA-Seq CTNND1-TMX2 CTNND1 chr11 57529518 + TMX2 chr11 57505079 + Exonic hg19 OV TCGA-31-1951 10 5'UTR-5'UTR Intra-chr q12.1 Tumor suppressor gene q12.1 Seq+ 10740 ChimerSeq FusionScan TCGA_RNA-Seq SAP30BP-LLGL2 SAP30BP chr17 73667943 + LLGL2 chr17 73559096 + Exonic hg19 OV TCGA-31-1951 8 Out-of-Frame Intra-chr q25.1 q25.1 Seq+ 10741 ChimerSeq FusionScan TCGA_RNA-Seq SEC23B-DTD1 SEC23B chr20 18488634 + DTD1 chr20 18724743 + Exonic hg19 OV TCGA-31-1951 7 5'UTR-CDS Intra-chr p11.23 p11.23 Seq+ 10742 ChimerSeq FusionScan TCGA_RNA-Seq GALNT11-ORAI1 GALNT11 chr7 151722969 + ORAI1 chr12 122078946 + Exonic hg19 OV TCGA-31-1951 6 5'UTR-CDS Inter-chr q36.1 q24.31 Seq+ 10743 ChimerSeq FusionScan TCGA_RNA-Seq CDK5RAP1-C7orf42 CDK5RAP1 chr20 31967266 - C7orf42 chr7 66406834 + Exonic hg19 OV TCGA-31-1951 4 CDS-5'UTR Inter-chr q11.21 10744 ChimerSeq FusionScan TCGA_RNA-Seq KHDRBS1-PTP4A2 KHDRBS1 chr1 32479978 + PTP4A2 chr1 32385259 - Exonic hg19 OV TCGA-31-1951 4 CDS-5'UTR Intra-chr p35.2 p35.2 10745 ChimerSeq FusionScan TCGA_RNA-Seq POR-CTTNBP2 POR chr7 75583498 + CTTNBP2 chr7 117368321 - Exonic hg19 OV TCGA-31-1951 4 Out-of-Frame Intra-chr q11.23 q31.31 Seq+ 10746 ChimerSeq FusionScan TCGA_RNA-Seq TRAF3IP1-GALNTL5 TRAF3IP1 chr2 239258049 + GALNTL5 chr7 151716730 + Exonic hg19 OV TCGA-31-1951 3 Out-of-Frame Inter-chr q37.3 q36.1 Seq+ 10747 ChimerSeq FusionScan TCGA_RNA-Seq TPRA1-MCM2 TPRA1 chr3 127309252 - MCM2 chr3 127334704 + Exonic hg19 OV TCGA-31-1951 3 5'UTR-CDS Intra-chr q21.3 q21.3 Seq+ 10748 ChimerSeq FusionScan TCGA_RNA-Seq PIP5K1A-CSDE1 PIP5K1A chr1 151205179 + CSDE1 chr1 115261366 - Exonic hg19 OV TCGA-31-1951 2 Out-of-Frame Intra-chr q21.3 p13.2 10749 ChimerSeq FusionScan TCGA_RNA-Seq CTNND1-TMX2 CTNND1 chr11 57529591 + TMX2 chr11 57505079 + Exonic hg19 OV TCGA-31-1951 2 5'UTR-5'UTR Intra-chr q12.1 Tumor suppressor gene q12.1 Seq+ 10750 ChimerSeq FusionScan TCGA_RNA-Seq C19orf48-KLK7 C19orf48 chr19 51305473 - KLK7 chr19 51485170 - Exonic hg19 OV TCGA-31-1951 2 5'UTR-5'UTR Intra-chr q13.33 q13.41 Seq+ 10751 ChimerSeq FusionScan TCGA_RNA-Seq ENGASE-TNRC6C ENGASE chr17 77076446 + TNRC6C chr17 76082583 + Exonic hg19 OV TCGA-31-1951 2 In-Frame Intra-chr q25.3 q25.3 Seq+ 10752 ChimerSeq FusionScan TCGA_RNA-Seq SLC39A14-PPP3CC SLC39A14 chr8 22273793 + PPP3CC chr8 22332466 + Exonic hg19 OV TCGA-31-1951 2 In-Frame Intra-chr p21.3 p21.3 Tumor suppressor gene 10753 ChimerSeq FusionScan TCGA_RNA-Seq SEC23B-DTD1 SEC23B chr20 18488616 + DTD1 chr20 18724743 + Exonic hg19 OV TCGA-31-1951 2 5'UTR-CDS Intra-chr p11.23 p11.23 Seq+ 10754 ChimerSeq FusionScan TCGA_RNA-Seq NSMCE2-PBX3 NSMCE2 chr8 126194498 + PBX3 chr9 128677964 + Exonic hg19 OV TCGA-24-1567 3 In-Frame Inter-chr q24.13 q33.3 Transcription factor Seq+ 10755 ChimerSeq FusionScan TCGA_RNA-Seq MTHFD1-CASK MTHFD1 chr14 64916340 + CASK chrX 41530783 - Exonic hg19 OV TCGA-24-1567 2 In-Frame Inter-chr q23.3 p11.4 CAMK:CASK 10756 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152498705 + Exonic hg19 OV TCGA-24-1567 2 In-Frame Intra-chr q36.1 Seq+ 10757 ChimerSeq FusionScan TCGA_RNA-Seq SMC5-CDKN2A SMC5 chr9 72879361 + CDKN2A chr9 21971207 - Exonic hg19 OV TCGA-13-0725 2 In-Frame Intra-chr q21.12 p21.3 Oncogene Tumor suppressor gene 10758 ChimerSeq FusionScan TCGA_RNA-Seq NIPA2-CYFIP1 NIPA2 chr15 23012278 - CYFIP1 chr15 23002875 + Exonic hg19 OV TCGA-13-0725 2 Out-of-Frame Intra-chr q11.2 q11.2 10759 ChimerSeq FusionScan TCGA_RNA-Seq RNF2-TMCO3 RNF2 chr1 185014781 + TMCO3 chr13 114193671 + Exonic hg19 OV TCGA-09-1661 2 5'UTR-CDS Inter-chr q25.3 Oncogene q34 10760 ChimerSeq FusionScan TCGA_RNA-Seq SHFM1-PALMD SHFM1 chr7 96324109 - PALMD chr1 100152231 + Exonic hg19 OV TCGA-09-1661 2 In-Frame Inter-chr p21.2 10761 ChimerSeq FusionScan TCGA_RNA-Seq ZFP36-CSPP1 ZFP36 chr19 39897568 + CSPP1 chr8 68084650 + Exonic hg19 OV TCGA-09-1661 2 Out-of-Frame Inter-chr q13.2 Tumor suppressor gene q13.1 10762 ChimerSeq FusionScan TCGA_RNA-Seq UTRN-WDR67 UTRN chr6 145161968 + WDR67 chr8 124162275 + Exonic hg19 OV TCGA-23-1122 7 In-Frame Inter-chr q24.2 Seq+ 10763 ChimerSeq FusionScan TCGA_RNA-Seq LGR6-RNPEP LGR6 chr1 202163329 + RNPEP chr1 201965274 + Exonic hg19 OV TCGA-23-1122 6 In-Frame Intra-chr q32.1 q32.1 Seq+ 10764 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0195-TTYH2 KIAA0195 chr17 73452832 + TTYH2 chr17 72227026 + Exonic hg19 OV TCGA-23-1122 4 5'UTR-CDS Intra-chr q25.1 Seq+ 10765 ChimerSeq FusionScan TCGA_RNA-Seq RHEB-MLL3 RHEB chr7 151167656 - MLL3 chr7 151856157 - Exonic hg19 OV TCGA-23-1122 2 In-Frame Intra-chr q36.1 Oncogene Tumor suppressor gene 10766 ChimerSeq FusionScan TCGA_RNA-Seq HSPA9-EIF3E HSPA9 chr5 137897268 - EIF3E chr8 109226945 - Exonic hg19 OV TCGA-23-1122 2 In-Frame Inter-chr q31.2 q23.1 10767 ChimerSeq FusionScan TCGA_RNA-Seq UTRN-WDR67 UTRN chr6 145161968 + WDR67 chr8 124164045 + Exonic hg19 OV TCGA-23-1122 2 In-Frame Inter-chr q24.2 Seq+ 10768 ChimerSeq FusionScan TCGA_RNA-Seq CAAP1-TNNI3K CAAP1 chr9 26861063 - TNNI3K chr1 74832939 + Exonic hg19 OV TCGA-61-2095 8 In-Frame Inter-chr p21.2 p31.1 Seq+ 10769 ChimerSeq FusionScan TCGA_RNA-Seq CRYZ-VPS13D CRYZ chr1 75184892 - VPS13D chr1 12475139 + Exonic hg19 OV TCGA-61-2095 5 Out-of-Frame Intra-chr p31.1 p36.22 Seq+ 10770 ChimerSeq FusionScan TCGA_RNA-Seq PCNX-TTC19 PCNX chr14 71435827 + TTC19 chr17 15928330 + Exonic hg19 OV TCGA-61-2095 2 In-Frame Inter-chr p12 10771 ChimerSeq FusionScan TCGA_RNA-Seq SRGAP2P2-C1orf173 SRGAP2P2 chr1 143916308 + C1orf173 chr1 75114999 - Exonic hg19 OV TCGA-61-2095 2 5'UTR-CDS Intra-chr 10772 ChimerSeq FusionScan TCGA_RNA-Seq CDKL3-PPP2CA CDKL3 chr5 133638280 - PPP2CA chr5 133541822 - Exonic hg19 OV TCGA-61-2095 2 In-Frame Intra-chr q31.1 CMGC:CDKL q31.1 Tumor suppressor gene 10773 ChimerSeq FusionScan TCGA_RNA-Seq SPRED3-RFXANK SPRED3 chr19 38885116 + RFXANK chr19 19304747 + Exonic hg19 OV TCGA-61-2095 2 3'UTR-5'UTR Intra-chr q13.2 p13.11 10774 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-ITGB3BP RCC1 chr1 28834672 + ITGB3BP chr1 63920639 - Exonic hg19 OV TCGA-61-2095 2 5'UTR-CDS Intra-chr p35.3 p31.3 Seq+ 10775 ChimerSeq FusionScan TCGA_RNA-Seq MFSD11-ASF1B MFSD11 chr17 74772623 + ASF1B chr19 14237049 - Exonic hg19 OV TCGA-61-2095 2 Out-of-Frame Inter-chr q25.1 p13.12 10776 ChimerSeq FusionScan TCGA_RNA-Seq TOR4A-C9orf86 TOR4A chr9 140172359 + C9orf86 chr9 139717976 + Exonic hg19 OV TCGA-61-2095 2 5'UTR-CDS Intra-chr q34.3 10777 ChimerSeq FusionScan TCGA_RNA-Seq DNAJB1-EPS15L1 DNAJB1 chr19 14628950 - EPS15L1 chr19 16472795 - Exonic hg19 OV TCGA-04-1519 7 In-Frame Intra-chr p13.12 Tumor suppressor gene p13.11 Seq+ 10778 ChimerSeq FusionScan TCGA_RNA-Seq INSR-ERCC1 INSR chr19 7293802 - ERCC1 chr19 45926639 - Exonic hg19 OV TCGA-24-2027 4 CDS-5'UTR Intra-chr p13.2 TK:InsR q13.32 Oncogene Seq+ 10779 ChimerSeq FusionScan TCGA_RNA-Seq NSUN6-ARMS2 NSUN6 chr10 18940057 - ARMS2 chr10 124216422 + Exonic hg19 OV TCGA-24-2027 3 In-Frame Intra-chr p12.31 q26.13 Seq+ 10780 ChimerSeq FusionScan TCGA_RNA-Seq ISG20-UBA2 ISG20 chr15 89195541 + UBA2 chr19 34949673 + Exonic hg19 OV TCGA-24-2027 2 In-Frame Inter-chr q26.1 q13.11 10781 ChimerSeq FusionScan TCGA_RNA-Seq NTN1-PKD2L2 NTN1 chr17 9086286 + PKD2L2 chr5 137275778 + Exonic hg19 OV TCGA-24-2027 2 Out-of-Frame Inter-chr p13.1 q31.2 Seq+ 10782 ChimerSeq FusionScan TCGA_RNA-Seq LRCH3-SLC16A13 LRCH3 chr3 197518411 + SLC16A13 chr17 6943081 + Exonic hg19 OV TCGA-24-0968 8 In-Frame Inter-chr q29 p13.1 Seq+ 10783 ChimerSeq FusionScan TCGA_RNA-Seq EWSR1-AP1B1 EWSR1 chr22 29664338 + AP1B1 chr22 29763259 - Exonic hg19 OV TCGA-24-0968 6 CDS-5'UTR Intra-chr q12.2 q12.2 Seq+ 10784 ChimerSeq FusionScan TCGA_RNA-Seq SF3B3-DDX19B SF3B3 chr16 70595687 + DDX19B chr16 70351398 + Exonic hg19 OV TCGA-24-0968 6 In-Frame Intra-chr q22.1 q22.1 Seq+ 10785 ChimerSeq FusionScan TCGA_RNA-Seq NPLOC4-RBPMS2 NPLOC4 chr17 79596750 - RBPMS2 chr15 65033441 - Exonic hg19 OV TCGA-24-0968 3 In-Frame Inter-chr q25.3 q22.31 Seq+ 10786 ChimerSeq FusionScan TCGA_RNA-Seq EWSR1-EMID1 EWSR1 chr22 29669853 + EMID1 chr22 29650191 + Exonic hg19 OV TCGA-24-0968 3 Out-of-Frame Intra-chr q12.2 q12.2 Seq+ 10787 ChimerSeq FusionScan TCGA_RNA-Seq NSD1-ZNF346 NSD1 chr5 176631293 + ZNF346 chr5 176468126 + Exonic hg19 OV TCGA-24-0968 2 Out-of-Frame Intra-chr q35.3 Oncogene q35.2 Transcription factor Seq+ 10788 ChimerSeq FusionScan TCGA_RNA-Seq ROCK2-HOXD4 ROCK2 chr2 11332273 - HOXD4 chr2 177017335 + Exonic hg19 OV TCGA-24-0968 2 Out-of-Frame Intra-chr p25.1 AGC:DMPK q31.1 Transcription factor 10789 ChimerSeq FusionScan TCGA_RNA-Seq EWSR1-EMID1 EWSR1 chr22 29674205 + EMID1 chr22 29639433 + Exonic hg19 OV TCGA-24-0968 2 Out-of-Frame Intra-chr q12.2 q12.2 Seq+ 10790 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-DDX39B RCC1 chr1 28834672 + DDX39B chr6 31503262 - Exonic hg19 OV TCGA-24-0968 2 5'UTR-5'UTR Inter-chr p35.3 10791 ChimerSeq FusionScan TCGA_RNA-Seq SLC44A4-TNXB SLC44A4 chr6 31836931 - TNXB chr6 32010139 - Exonic hg19 OV TCGA-24-1470 22 5'UTR-5'UTR Intra-chr Seq+ 10792 ChimerSeq FusionScan TCGA_RNA-Seq EHBP1L1-POLA2 EHBP1L1 chr11 65343877 + POLA2 chr11 65061623 + Exonic hg19 OV TCGA-24-1470 11 In-Frame Intra-chr q13.1 q13.1 Seq+ 10793 ChimerSeq FusionScan TCGA_RNA-Seq SRRM2-KCTD5 SRRM2 chr16 2810500 + KCTD5 chr16 2745935 + Exonic hg19 OV TCGA-24-1470 9 In-Frame Intra-chr p13.3 p13.3 Seq+ 10794 ChimerSeq FusionScan TCGA_RNA-Seq SETD8-RILPL2 SETD8 chr12 123880979 + RILPL2 chr12 123915206 - Exonic hg19 OV TCGA-24-1470 7 In-Frame Intra-chr q24.31 Seq+ 10795 ChimerSeq FusionScan TCGA_RNA-Seq SLC5A1-DEPDC5 SLC5A1 chr22 32487749 + DEPDC5 chr22 32266575 + Exonic hg19 OV TCGA-24-1470 4 Out-of-Frame Intra-chr q12.3 q12.2 Seq+ 10796 ChimerSeq FusionScan TCGA_RNA-Seq TTLL5-AUP1 TTLL5 chr14 76368567 + AUP1 chr2 74755133 - Exonic hg19 OV TCGA-24-1470 3 Out-of-Frame Inter-chr q24.3 p13.1 10797 ChimerSeq FusionScan TCGA_RNA-Seq ZFR-SND1 ZFR chr5 32444334 - SND1 chr7 127527954 + Exonic hg19 OV TCGA-24-1470 3 In-Frame Inter-chr p13.3 q32.1 Seq+ 10798 ChimerSeq FusionScan TCGA_RNA-Seq FBXL18-ACTB FBXL18 chr7 5530861 - ACTB chr7 5567816 - Exonic hg19 OV TCGA-24-1470 3 CDS-3'UTR Intra-chr p22.1 p22.1 Seq+ 10799 ChimerSeq FusionScan TCGA_RNA-Seq JAZF1-TAX1BP1 JAZF1 chr7 28220081 - TAX1BP1 chr7 27824781 + Exonic hg19 OV TCGA-24-1470 2 Out-of-Frame Intra-chr p15.1 Transcription factor p15.2 Seq+ 10800 ChimerSeq FusionScan TCGA_RNA-Seq PARD3-CAMK1D PARD3 chr10 34739244 - CAMK1D chr10 12708734 + Exonic hg19 OV TCGA-25-1635 3 Out-of-Frame Intra-chr p11.21 p13 Seq+ 10801 ChimerSeq FusionScan TCGA_RNA-Seq ZNF251-TMEM2 ZNF251 chr8 145979067 - TMEM2 chr9 74347436 - Exonic hg19 OV TCGA-25-1635 2 In-Frame Inter-chr Transcription factor q21.13 10802 ChimerSeq FusionScan TCGA_RNA-Seq CAPNS1-CXCL16 CAPNS1 chr19 36641255 + CXCL16 chr17 4638803 - Exonic hg19 OV TCGA-25-1635 2 3'UTR-CDS Inter-chr q13.12 p13.2 10803 ChimerSeq FusionScan TCGA_RNA-Seq MTERFD1-SLC13A3 MTERFD1 chr8 97263133 - SLC13A3 chr20 45242364 - Exonic hg19 OV TCGA-25-1635 2 Out-of-Frame Inter-chr q13.12 10804 ChimerSeq FusionScan TCGA_RNA-Seq TRPC4AP-RAC1 TRPC4AP chr20 33680416 - RAC1 chr7 6439756 + Exonic hg19 OV TCGA-25-1635 2 In-Frame Inter-chr q11.22 p22.1 Oncogene 10805 ChimerSeq FusionScan TCGA_RNA-Seq MTMR3-AATF MTMR3 chr22 30375041 + AATF chr17 35413900 + Exonic hg19 OV TCGA-24-1846 2 Out-of-Frame Inter-chr q12.2 10806 ChimerSeq FusionScan TCGA_RNA-Seq CASZ1-EXOSC10 CASZ1 chr1 10725139 - EXOSC10 chr1 11134383 - Exonic hg19 OV TCGA-24-1846 2 Out-of-Frame Intra-chr p36.22 Transcription factor p36.22 Seq+ 10807 ChimerSeq FusionScan TCGA_RNA-Seq MPHOSPH10-ATP6V1B1 MPHOSPH10 chr2 71365761 + ATP6V1B1 chr2 71185175 + Exonic hg19 OV TCGA-24-1846 2 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 10808 ChimerSeq FusionScan TCGA_RNA-Seq TAF1D-PHF14 TAF1D chr11 93470229 - PHF14 chr7 11150976 + Exonic hg19 OV TCGA-24-1846 2 CDS-5'UTR Inter-chr q21 p21.3 10809 ChimerSeq FusionScan TCGA_RNA-Seq MPHOSPH10-ATP6V1B1 MPHOSPH10 chr2 71361927 + ATP6V1B1 chr2 71185175 + Exonic hg19 OV TCGA-24-1846 2 In-Frame Intra-chr p13.3 p13.3 Seq+ 10810 ChimerSeq FusionScan TCGA_RNA-Seq NOTCH2-MNDA NOTCH2 chr1 120478094 - MNDA chr1 158815376 + Exonic hg19 OV TCGA-24-1474 55 Out-of-Frame Intra-chr p12 Oncogene Tumor suppressor gene q23.1 Seq+ 10811 ChimerSeq FusionScan TCGA_RNA-Seq EPS15L1-CIB3 EPS15L1 chr19 16582723 - CIB3 chr19 16275724 - Exonic hg19 OV TCGA-24-1474 17 Out-of-Frame Intra-chr p13.11 p13.11 Seq+ 10812 ChimerSeq FusionScan TCGA_RNA-Seq ATP5I-WHSC1 ATP5I chr4 667700 - WHSC1 chr4 1936870 + Exonic hg19 OV TCGA-24-1474 13 In-Frame Intra-chr p16.3 Oncogene Seq+ 10813 ChimerSeq FusionScan TCGA_RNA-Seq NAA25-ATXN2 NAA25 chr12 112498073 - ATXN2 chr12 111891649 - Exonic hg19 OV TCGA-24-1474 7 Out-of-Frame Intra-chr q24.13 q24.12 Seq+ 10814 ChimerSeq FusionScan TCGA_RNA-Seq MICA-LY6G6C MICA chr6 31368539 + LY6G6C chr6 31687087 - Exonic hg19 OV TCGA-24-1474 5 3'UTR-5'UTR Intra-chr p21.33 Seq+ 10815 ChimerSeq FusionScan TCGA_RNA-Seq EPS15L1-CIB3 EPS15L1 chr19 16582723 - CIB3 chr19 16279095 - Exonic hg19 OV TCGA-24-1474 4 In-Frame Intra-chr p13.11 p13.11 Seq+ 10816 ChimerSeq FusionScan TCGA_RNA-Seq SLC7A2-DHTKD1 SLC7A2 chr8 17354746 + DHTKD1 chr10 12154898 + Exonic hg19 OV TCGA-24-1474 4 5'UTR-CDS Inter-chr p22 p14 Seq+ 10817 ChimerSeq FusionScan TCGA_RNA-Seq ST3GAL1-GPR39 ST3GAL1 chr8 134583935 - GPR39 chr2 133402673 + Exonic hg19 OV TCGA-24-1474 4 5'UTR-CDS Inter-chr q24.22 q21.2 Seq+ 10818 ChimerSeq FusionScan TCGA_RNA-Seq SSH2-NCOR1 SSH2 chr17 28120911 - NCOR1 chr17 16097953 - Exonic hg19 OV TCGA-24-1474 3 CDS-5'UTR Intra-chr q11.2 p11.2 Oncogene 10819 ChimerSeq FusionScan TCGA_RNA-Seq ZNF93-CYP4F22 ZNF93 chr19 20011900 + CYP4F22 chr19 15634503 + Exonic hg19 OV TCGA-24-1474 3 CDS-5'UTR Intra-chr p12 Transcription factor p13.12 Seq+ 10820 ChimerSeq FusionScan TCGA_RNA-Seq TP53-SLC6A4 TP53 chr17 7590694 - SLC6A4 chr17 28549933 - Exonic hg19 OV TCGA-24-1474 3 5'UTR-3'UTR Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor q11.2 Seq+ 10821 ChimerSeq FusionScan TCGA_RNA-Seq KNTC1-FBXL12 KNTC1 chr12 123065217 + FBXL12 chr19 9922393 - Exonic hg19 OV TCGA-24-1474 2 In-Frame Inter-chr q24.31 p13.2 10822 ChimerSeq FusionScan TCGA_RNA-Seq ZNF587B-LHFPL4 ZNF587B chr19 58350517 + LHFPL4 chr3 9547887 - Exonic hg19 OV TCGA-24-1474 2 In-Frame Inter-chr q13.43 Transcription factor p25.3 Seq+ 10823 ChimerSeq FusionScan TCGA_RNA-Seq EPS15L1-CIB3 EPS15L1 chr19 16582723 - CIB3 chr19 16280552 - Exonic hg19 OV TCGA-24-1474 2 Out-of-Frame Intra-chr p13.11 p13.11 Seq+ 10824 ChimerSeq FusionScan TCGA_RNA-Seq LGR6-GPR37L1 LGR6 chr1 202205121 + GPR37L1 chr1 202096868 + Exonic hg19 OV TCGA-VG-A8LO 22 Out-of-Frame Intra-chr q32.1 q32.1 Seq+ 10825 ChimerSeq FusionScan TCGA_RNA-Seq SORL1-CEP164 SORL1 chr11 121367758 + CEP164 chr11 117251329 + Exonic hg19 OV TCGA-VG-A8LO 15 In-Frame Intra-chr q24.1 q23.3 Seq+ 10826 ChimerSeq FusionScan TCGA_RNA-Seq PICALM-ME3 PICALM chr11 85707868 - ME3 chr11 86198482 - Exonic hg19 OV TCGA-VG-A8LO 9 Out-of-Frame Intra-chr q14.2 q14.2 Seq+ 10827 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R37-CLASRP PPP1R37 chr19 45596785 + CLASRP chr19 45570594 + Exonic hg19 OV TCGA-VG-A8LO 9 Out-of-Frame Intra-chr q13.32 q13.32 Seq+ 10828 ChimerSeq FusionScan TCGA_RNA-Seq LMBR1-PTPRN2 LMBR1 chr7 156516805 - PTPRN2 chr7 157691429 - Exonic hg19 OV TCGA-VG-A8LO 8 In-Frame Intra-chr q36.3 q36.3 Seq+ 10829 ChimerSeq FusionScan TCGA_RNA-Seq ATP6V1H-TCEA1 ATP6V1H chr8 54742003 - TCEA1 chr8 54912610 - Exonic hg19 OV TCGA-VG-A8LO 7 In-Frame Intra-chr q11.23 q11.23 Seq+ 10830 ChimerSeq FusionScan TCGA_RNA-Seq FN3K-HEXDC FN3K chr17 80693653 + HEXDC chr17 80398872 + Exonic hg19 OV TCGA-VG-A8LO 4 Out-of-Frame Intra-chr q25.3 q25.3 Seq+ 10831 ChimerSeq FusionScan TCGA_RNA-Seq CPSF1-RECQL4 CPSF1 chr8 145624665 - RECQL4 chr8 145742148 - Exonic hg19 OV TCGA-VG-A8LO 4 In-Frame Intra-chr q24.3 q24.3 Oncogene Seq+ 10832 ChimerSeq FusionScan TCGA_RNA-Seq EPB41L4B-PTPN3 EPB41L4B chr9 112042096 - PTPN3 chr9 112153841 - Exonic hg19 OV TCGA-VG-A8LO 3 In-Frame Intra-chr q31.3 q31.3 Seq+ 10833 ChimerSeq FusionScan TCGA_RNA-Seq PPIL3-ORC2 PPIL3 chr2 201752335 - ORC2 chr2 201785862 - Exonic hg19 OV TCGA-VG-A8LO 3 Out-of-Frame Intra-chr q33.1 q33.1 10834 ChimerSeq FusionScan TCGA_RNA-Seq SKAP1-HOXB9 SKAP1 chr17 46423266 - HOXB9 chr17 46700497 - Exonic hg19 OV TCGA-VG-A8LO 3 In-Frame Intra-chr q21.32 q21.32 Transcription factor Seq+ 10835 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA11-FUT6 NDUFA11 chr19 5896463 - FUT6 chr19 5832590 - Exonic hg19 OV TCGA-VG-A8LO 3 CDS-5'UTR Intra-chr p13.3 p13.3 10836 ChimerSeq FusionScan TCGA_RNA-Seq PARD6B-PTPN1 PARD6B chr20 49348389 + PTPN1 chr20 49177899 + Exonic hg19 OV TCGA-VG-A8LO 2 In-Frame Intra-chr q13.13 q13.13 Tumor suppressor gene Seq+ 10837 ChimerSeq FusionScan TCGA_RNA-Seq DDX10-NTM DDX10 chr11 108594189 + NTM chr11 131781457 + Exonic hg19 OV TCGA-VG-A8LO 2 Out-of-Frame Intra-chr q22.3 q25 10838 ChimerSeq FusionScan TCGA_RNA-Seq SKAP1-HOXB7 SKAP1 chr17 46423266 - HOXB7 chr17 46685457 - Exonic hg19 OV TCGA-VG-A8LO 2 In-Frame Intra-chr q21.32 q21.32 Transcription factor Seq+ 10839 ChimerSeq FusionScan TCGA_RNA-Seq BACE2-FAM3B BACE2 chr21 42629253 + FAM3B chr21 42710304 + Exonic hg19 OV TCGA-VG-A8LO 2 In-Frame Intra-chr q22.2 q22.3 Seq+ 10840 ChimerSeq FusionScan TCGA_RNA-Seq HOXB6-TEC HOXB6 chr17 46681841 - TEC chr4 48230676 - Exonic hg19 OV TCGA-VG-A8LO 2 5'UTR-5'UTR Inter-chr q21.32 Transcription factor p11 TK:Tec Tumor suppressor gene 10841 ChimerSeq FusionScan TCGA_RNA-Seq URI1-TYW1B URI1 chr19 30433571 + TYW1B chr7 72081824 - Exonic hg19 OV TCGA-36-1578 9 In-Frame Inter-chr q12 q11.23 Seq+ 10842 ChimerSeq FusionScan TCGA_RNA-Seq URI1-TYW1B URI1 chr19 30462134 + TYW1B chr7 72081824 - Exonic hg19 OV TCGA-36-1578 9 Out-of-Frame Inter-chr q12 q11.23 Seq+ 10843 ChimerSeq FusionScan TCGA_RNA-Seq CHERP-MED26 CHERP chr19 16652680 - MED26 chr19 16689220 - Exonic hg19 OV TCGA-36-1578 6 Out-of-Frame Intra-chr p13.11 p13.11 Seq+ 10844 ChimerSeq FusionScan TCGA_RNA-Seq SARNP-SMARCC2 SARNP chr12 56182858 - SMARCC2 chr12 56571877 - Exonic hg19 OV TCGA-36-1578 3 Out-of-Frame Intra-chr q13.2 q13.2 10845 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-NREP RCC1 chr1 28834672 + NREP chr5 111092876 - Exonic hg19 OV TCGA-36-1578 2 5'UTR-5'UTR Inter-chr p35.3 q22.1 10846 ChimerSeq FusionScan TCGA_RNA-Seq BOP1-TCF3 BOP1 chr8 145500211 - TCF3 chr19 1650286 - Exonic hg19 OV TCGA-36-1578 2 CDS-5'UTR Inter-chr q24.3 p13.3 Oncogene Tumor suppressor gene Transcription factor 10847 ChimerSeq FusionScan TCGA_RNA-Seq FKBP4-GNB2L1 FKBP4 chr12 2904410 + GNB2L1 chr5 180664042 - Exonic hg19 OV TCGA-36-1578 2 In-Frame Inter-chr p13.33 Tumor suppressor gene 10848 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-FKBP8 RCC1 chr1 28834672 + FKBP8 chr19 18652805 - Exonic hg19 OV TCGA-36-1578 2 5'UTR-5'UTR Inter-chr p35.3 p13.11 10849 ChimerSeq FusionScan TCGA_RNA-Seq CD99L2-G6PD CD99L2 chrX 149999703 - G6PD chrX 153764393 - Exonic hg19 OV TCGA-61-2008 6 Out-of-Frame Intra-chr q28 q28 Oncogene Seq+ 10850 ChimerSeq FusionScan TCGA_RNA-Seq CTSB-UBAP2L CTSB chr8 11710837 - UBAP2L chr1 154234067 + Exonic hg19 OV TCGA-61-2008 2 In-Frame Inter-chr p23.1 q21.3 10851 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP18-L3MBTL3 ARHGAP18 chr6 130031168 - L3MBTL3 chr6 130343371 + Exonic hg19 OV TCGA-61-2008 2 CDS-5'UTR Intra-chr q22.33 q23.1 Transcription factor 10852 ChimerSeq FusionScan TCGA_RNA-Seq SULF1-RPS29 SULF1 chr8 70512988 + RPS29 chr14 50052767 - Exonic hg19 OV TCGA-09-1667 6 Out-of-Frame Inter-chr q13.2 q21.3 Seq+ 10853 ChimerSeq FusionScan TCGA_RNA-Seq WWP1-C8orf34 WWP1 chr8 87442980 + C8orf34 chr8 69688633 + Exonic hg19 OV TCGA-09-1667 5 Out-of-Frame Intra-chr q21.3 q13.2 Seq+ 10854 ChimerSeq FusionScan TCGA_RNA-Seq CERS2-GOLPH3L CERS2 chr1 150941393 - GOLPH3L chr1 150621224 - Exonic hg19 OV TCGA-09-1667 5 Out-of-Frame Intra-chr q21.3 q21.3 Seq+ 10855 ChimerSeq FusionScan TCGA_RNA-Seq RIMS4-AKAP10 RIMS4 chr20 43438815 - AKAP10 chr17 19871774 - Exonic hg19 OV TCGA-09-1667 4 In-Frame Inter-chr q13.12 p11.2 Seq+ 10856 ChimerSeq FusionScan TCGA_RNA-Seq SULF1-RPS29 SULF1 chr8 70512988 + RPS29 chr14 50044571 - Exonic hg19 OV TCGA-09-1667 2 In-Frame Inter-chr q13.2 q21.3 Seq+ 10857 ChimerSeq FusionScan TCGA_RNA-Seq SPRED3-RFXANK SPRED3 chr19 38885116 + RFXANK chr19 19304747 + Exonic hg19 OV TCGA-09-1667 2 3'UTR-5'UTR Intra-chr q13.2 p13.11 10858 ChimerSeq FusionScan TCGA_RNA-Seq PDK1-RBMS1 PDK1 chr2 173421074 + RBMS1 chr2 161143595 - Exonic hg19 OV TCGA-09-1667 2 In-Frame Intra-chr q31.1 AGC:PDK1 q24.2 10859 ChimerSeq FusionScan TCGA_RNA-Seq TUBGCP5-PPP1R13B TUBGCP5 chr15 22864369 + PPP1R13B chr14 104263855 - Exonic hg19 OV TCGA-09-1667 2 Out-of-Frame Inter-chr q11.2 q32.33 10860 ChimerSeq FusionScan TCGA_RNA-Seq IGF2BP2-SRPRB IGF2BP2 chr3 185540940 - SRPRB chr3 133534433 + Exonic hg19 OV TCGA-09-1667 2 In-Frame Intra-chr q27.2 q22.1 10861 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-ZBTB7A RCC1 chr1 28834672 + ZBTB7A chr19 4055245 - Exonic hg19 OV TCGA-09-1667 2 5'UTR-5'UTR Inter-chr p35.3 p13.3 Transcription factor 10862 ChimerSeq FusionScan TCGA_RNA-Seq JAK1-HSD11B1 JAK1 chr1 65432015 - HSD11B1 chr1 209878261 + Exonic hg19 OV TCGA-09-1667 2 5'UTR-5'UTR Intra-chr p31.3 TK:JakA Oncogene q32.2 Seq+ 10863 ChimerSeq FusionScan TCGA_RNA-Seq PPP5C-NDE1 PPP5C chr19 46879831 + NDE1 chr16 15818047 + Exonic hg19 PAAD TCGA-US-A77E 2 Out-of-Frame Inter-chr q13.32 p13.11 10864 ChimerSeq FusionScan TCGA_RNA-Seq MZT2B-SMPD4 MZT2B chr2 130940348 + SMPD4 chr2 130940323 - Exonic hg19 PAAD TCGA-S4-A8RO 2 CDS-5'UTR Intra-chr q21.1 q21.1 10865 ChimerSeq FusionScan TCGA_RNA-Seq LASP1-RBX1 LASP1 chr17 37046757 + RBX1 chr22 41349558 + Exonic hg19 PAAD TCGA-FB-AAQ3 3 In-Frame Inter-chr q12 q13.2 Seq+ 10866 ChimerSeq FusionScan TCGA_RNA-Seq DHRSX-RPS4Y1 DHRSX chrY 2159542 - RPS4Y1 chrY 2733128 + Exonic hg19 PAAD TCGA-F2-A7TX 2 CDS-5'UTR Intra-chr p22.33 p11.2 Seq+ 10867 ChimerSeq FusionScan TCGA_RNA-Seq SLC39A11-SDK2 SLC39A11 chr17 71080946 - SDK2 chr17 71364732 - Exonic hg19 PAAD TCGA-F2-6879 3 In-Frame Intra-chr q25.1 q25.1 Seq+ 10868 ChimerSeq FusionScan TCGA_RNA-Seq LRP6-PTPRO LRP6 chr12 12332743 - PTPRO chr12 15733630 + Exonic hg19 PAAD TCGA-F2-6879 2 In-Frame Intra-chr p12.3 Seq+ 10869 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF3-ARF4 ARHGEF3 chr3 56916319 - ARF4 chr3 57558025 - Exonic hg19 PAAD TCGA-HZ-8637 2 In-Frame Intra-chr p14.3 p14.3 Seq+ 10870 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 PAAD TCGA-HZ-8637 2 Out-of-Frame Intra-chr q22.2 q22.2 10871 ChimerSeq FusionScan TCGA_RNA-Seq SSBP3-TBC1D1 SSBP3 chr1 54867533 - TBC1D1 chr4 38134704 + Exonic hg19 PAAD TCGA-FB-AAPU 2 In-Frame Inter-chr p32.3 p14 10872 ChimerSeq FusionScan TCGA_RNA-Seq TMEM170B-C6orf228 TMEM170B chr6 11538607 + C6orf228 chr6 11134635 + Exonic hg19 PAAD TCGA-LB-A7SX 3 In-Frame Intra-chr p24.2 10873 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-PPP1R1B ERBB2 chr17 37883800 + PPP1R1B chr17 37791859 + Exonic hg19 PAAD TCGA-LB-A7SX 3 In-Frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 10874 ChimerSeq FusionScan TCGA_RNA-Seq KIF26B-C1orf101 KIF26B chr1 245530669 + C1orf101 chr1 244773541 + Exonic hg19 PAAD TCGA-LB-A7SX 2 In-Frame Intra-chr Seq+ 10875 ChimerSeq FusionScan TCGA_RNA-Seq TSHZ3-CDH2 TSHZ3 chr19 31840085 - CDH2 chr18 25593873 - Exonic hg19 PAAD TCGA-HV-A5A3 2 In-Frame Inter-chr q12 Transcription factor q12.1 Oncogene Seq+ 10876 ChimerSeq FusionScan TCGA_RNA-Seq CEL-NTRK1 CEL chr9 135942592 + NTRK1 chr1 156843424 + Exonic hg19 PAAD TCGA-HZ-7918 2 In-Frame Inter-chr q34.13 q23.1 Oncogene Seq+ 10877 ChimerSeq FusionScan TCGA_RNA-Seq DECR1-SAMSN1 DECR1 chr8 91031400 + SAMSN1 chr21 15870913 - Exonic hg19 PAAD TCGA-Q3-A5QY 2 In-Frame Inter-chr q21.3 q11.2 10878 ChimerSeq FusionScan TCGA_RNA-Seq B3GALNT2-ATXN10 B3GALNT2 chr1 235667440 - ATXN10 chr22 46125304 + Exonic hg19 PAAD TCGA-Q3-A5QY 2 Out-of-Frame Inter-chr q13.31 10879 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 PAAD TCGA-IB-AAUS 2 Out-of-Frame Intra-chr q22.2 q22.2 10880 ChimerSeq FusionScan TCGA_RNA-Seq SUPT5H-SAMD4B SUPT5H chr19 39950600 + SAMD4B chr19 39871629 + Exonic hg19 PAAD TCGA-IB-A7LX 2 In-Frame Intra-chr q13.2 q13.2 Seq+ 10881 ChimerSeq FusionScan TCGA_RNA-Seq CELA3B-PRSS1 CELA3B chr1 22310824 + PRSS1 chr7 142460718 + Exonic hg19 PAAD TCGA-F2-6880 2 In-Frame Inter-chr p36.12 10882 ChimerSeq FusionScan TCGA_RNA-Seq LRIG3-ATF7 LRIG3 chr12 59307762 - ATF7 chr12 53994805 - Exonic hg19 PAAD TCGA-HZ-A49I 8 CDS-5'UTR Intra-chr q14.1 Tumor suppressor gene q13.13 Transcription factor Seq+ 10883 ChimerSeq FusionScan TCGA_RNA-Seq CCDC9-PVRL2 CCDC9 chr19 47764096 + PVRL2 chr19 45368527 + Exonic hg19 PAAD TCGA-3A-A9IU 3 Out-of-Frame Intra-chr q13.32 Seq+ 10884 ChimerSeq FusionScan TCGA_RNA-Seq CTRB1-KLK10 CTRB1 chr16 75258086 + KLK10 chr19 51518208 - Exonic hg19 PAAD TCGA-F2-7273 2 In-Frame Inter-chr q23.1 q13.41 Tumor suppressor gene Seq+ 10885 ChimerSeq FusionScan TCGA_RNA-Seq LHFPL2-ENC1 LHFPL2 chr5 77944321 - ENC1 chr5 73932323 - Exonic hg19 PAAD TCGA-F2-7273 2 5'UTR-5'UTR Intra-chr q14.1 q13.3 10886 ChimerSeq FusionScan TCGA_RNA-Seq LETMD1-HTRA4 LETMD1 chr12 51442261 + HTRA4 chr8 38840471 + Exonic hg19 PAAD TCGA-F2-7273 2 In-Frame Inter-chr q13.12 p11.22 10887 ChimerSeq FusionScan TCGA_RNA-Seq EPB41L1-PROSC EPB41L1 chr20 34680735 + PROSC chr8 37630272 + Exonic hg19 PAAD TCGA-HZ-8638 2 5'UTR-CDS Inter-chr q11.23 10888 ChimerSeq FusionScan TCGA_RNA-Seq SEPN1-TMEM59 SEPN1 chr1 26139283 + TMEM59 chr1 54506510 - Exonic hg19 PAAD TCGA-3A-A9IH 5 In-Frame Intra-chr p32.3 Seq+ 10889 ChimerSeq FusionScan TCGA_RNA-Seq AXIN2-VWA3B AXIN2 chr17 63553923 - VWA3B chr2 98872586 + Exonic hg19 PAAD TCGA-IB-AAUP 3 In-Frame Inter-chr q24.1 Tumor suppressor gene q11.2 Seq+ 10890 ChimerSeq FusionScan TCGA_RNA-Seq XPO7-ASAH1 XPO7 chr8 21777299 + ASAH1 chr8 17933096 - Exonic hg19 PAAD TCGA-IB-7897 2 In-Frame Intra-chr p21.3 p22 10891 ChimerSeq FusionScan TCGA_RNA-Seq ATP1B1-NRG1 ATP1B1 chr1 169080736 + NRG1 chr8 32453345 + Exonic hg19 PAAD TCGA-3A-A9I5 3 In-Frame Inter-chr q24.2 p12 KB Pub Seq+ 10892 ChimerSeq FusionScan TCGA_RNA-Seq PCMTD1-MRPL15 PCMTD1 chr8 52811489 - MRPL15 chr8 55049070 + Exonic hg19 PAAD TCGA-HZ-A77P 2 5'UTR-CDS Intra-chr q11.23 q11.23 Seq+ 10893 ChimerSeq FusionScan TCGA_RNA-Seq PRDM2-BMP8B PRDM2 chr1 14075982 + BMP8B chr1 40240710 - Exonic hg19 PAAD TCGA-HZ-A9TJ 2 In-Frame Intra-chr p36.21 Tumor suppressor gene Transcription factor p34.2 10894 ChimerSeq FusionScan TCGA_RNA-Seq LAMA3-TAF4B LAMA3 chr18 21294036 + TAF4B chr18 23969808 + Exonic hg19 PAAD TCGA-HZ-A9TJ 2 In-Frame Intra-chr q11.2 q11.2 10895 ChimerSeq FusionScan TCGA_RNA-Seq PRDM2-BMP8A PRDM2 chr1 14075982 + BMP8A chr1 39976845 + Exonic hg19 PAAD TCGA-HZ-A9TJ 2 In-Frame Intra-chr p36.21 Tumor suppressor gene Transcription factor p34.3 Seq+ 10896 ChimerSeq FusionScan TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39212328 + CAPN12 chr19 39221863 - Exonic hg19 PAAD TCGA-IB-AAUQ 2 Out-of-Frame Intra-chr q13.2 Seq+ 10897 ChimerSeq FusionScan TCGA_RNA-Seq ATG5-RTN4IP1 ATG5 chr6 106649846 - RTN4IP1 chr6 107040175 - Exonic hg19 PAAD TCGA-IB-AAUQ 2 Out-of-Frame Intra-chr q21 q21 Tumor suppressor gene Seq+ 10898 ChimerSeq FusionScan TCGA_RNA-Seq CTRB1-CELA3B CTRB1 chr16 75257526 + CELA3B chr1 22313023 + Exonic hg19 PAAD TCGA-IB-AAUM 3 Out-of-Frame Inter-chr q23.1 p36.12 10899 ChimerSeq FusionScan TCGA_RNA-Seq CTRB1-TPSD1 CTRB1 chr16 75257526 + TPSD1 chr16 1308332 + Exonic hg19 PAAD TCGA-IB-AAUM 3 Out-of-Frame Intra-chr q23.1 p13.3 10900 ChimerSeq FusionScan TCGA_RNA-Seq CTRB1-KLK10 CTRB1 chr16 75257526 + KLK10 chr19 51518208 - Exonic hg19 PAAD TCGA-IB-AAUM 2 Out-of-Frame Inter-chr q23.1 q13.41 Tumor suppressor gene Seq+ 10901 ChimerSeq FusionScan TCGA_RNA-Seq TBCD-FOXK2 TBCD chr17 80714091 + FOXK2 chr17 80544938 + Exonic hg19 PAAD TCGA-RB-A7B8 2 In-Frame Intra-chr q25.3 Transcription factor Seq+ 10902 ChimerSeq FusionScan TCGA_RNA-Seq VSIG1-MID2 VSIG1 chrX 107288409 + MID2 chrX 107169323 + Exonic hg19 PAAD TCGA-US-A77G 18 In-Frame Intra-chr q22.3 q22.3 Seq+ 10903 ChimerSeq FusionScan TCGA_RNA-Seq UBE2G2-ABCG1 UBE2G2 chr21 46207834 - ABCG1 chr21 43704669 + Exonic hg19 PAAD TCGA-3E-AAAY 3 In-Frame Intra-chr q22.3 q22.3 Seq+ 10904 ChimerSeq FusionScan TCGA_RNA-Seq WRB-ERG WRB chr21 40752412 + ERG chr21 39817544 - Exonic hg19 PAAD TCGA-3E-AAAY 2 In-Frame Intra-chr q22.2 q22.2 Oncogene Transcription factor Seq+ 10905 ChimerSeq FusionScan TCGA_RNA-Seq CHD9-CDH11 CHD9 chr16 53191453 + CDH11 chr16 65032759 - Exonic hg19 PAAD TCGA-HZ-A4BK 2 In-Frame Intra-chr q12.2 q21 Oncogene Tumor suppressor gene 10906 ChimerSeq FusionScan TCGA_RNA-Seq IFNGR2-NUDCD3 IFNGR2 chr21 34805178 + NUDCD3 chr7 44444182 - Exonic hg19 PAAD TCGA-L1-A7W4 6 In-Frame Inter-chr p13 Seq+ 10907 ChimerSeq FusionScan TCGA_RNA-Seq PAK4-B9D1 PAK4 chr19 39616559 + B9D1 chr17 19251193 - Exonic hg19 PAAD TCGA-L1-A7W4 3 5'UTR-CDS Inter-chr q13.2 STE:STE20 p11.2 Seq+ 10908 ChimerSeq FusionScan TCGA_RNA-Seq CTRB1-CELA3B CTRB1 chr16 75257526 + CELA3B chr1 22313023 + Exonic hg19 PAAD TCGA-F2-7276 2 Out-of-Frame Inter-chr q23.1 p36.12 10909 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPC-SUPT16H HNRNPC chr14 21731469 - SUPT16H chr14 21841589 - Exonic hg19 PAAD TCGA-IB-A6UF 2 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 10910 ChimerSeq FusionScan TCGA_RNA-Seq PPP6R3-SSH3 PPP6R3 chr11 68287119 + SSH3 chr11 67074308 + Exonic hg19 PAAD TCGA-IB-7654 3 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 10911 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175388437 - Exonic hg19 PAAD TCGA-IB-7654 2 5'UTR-CDS Inter-chr q21.1 q35.2 10912 ChimerSeq FusionScan TCGA_RNA-Seq GMDS-VAPB GMDS chr6 1930336 - VAPB chr20 57019132 + Exonic hg19 PAAD TCGA-IB-7647 8 In-Frame Inter-chr p25.3 q13.32 Seq+ 10913 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 PAAD TCGA-3A-A9IB 2 Out-of-Frame Intra-chr q22.2 q22.2 10914 ChimerSeq FusionScan TCGA_RNA-Seq SMARCA2-BEND2 SMARCA2 chr9 2039900 + BEND2 chrX 18213562 - Exonic hg19 PAAD TCGA-3A-A9IR 2 In-Frame Inter-chr p24.3 Tumor suppressor gene p22.13 Seq+ 10915 ChimerSeq FusionScan TCGA_RNA-Seq ARID1A-WDTC1 ARID1A chr1 27102198 + WDTC1 chr1 27608729 + Exonic hg19 PAAD TCGA-IB-7893 4 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 Seq+ 10916 ChimerSeq FusionScan TCGA_RNA-Seq ADAM15-CHD1L ADAM15 chr1 155032450 + CHD1L chr1 146739084 + Exonic hg19 PAAD TCGA-2J-AABK 3 In-Frame Intra-chr q21.3 q21.1 Seq+ 10917 ChimerSeq FusionScan TCGA_RNA-Seq CFLAR-THADA CFLAR chr2 201983624 + THADA chr2 43520352 - Exonic hg19 PAAD TCGA-XD-AAUI 2 5'UTR-CDS Intra-chr q33.1 p21 10918 ChimerSeq FusionScan TCGA_RNA-Seq KANSL1-LINC00469 KANSL1 chr17 44143902 - LINC00469 chr17 71757165 - Exonic hg19 PAAD TCGA-XD-AAUI 2 3'UTR-3'UTR Intra-chr q25.1 Seq+ 10919 ChimerSeq FusionScan TCGA_RNA-Seq CASZ1-SLC9A1 CASZ1 chr1 10753930 - SLC9A1 chr1 27440777 - Exonic hg19 PAAD TCGA-3A-A9J0 2 In-Frame Intra-chr p36.22 Transcription factor p36.11 Seq+ 10920 ChimerSeq FusionScan TCGA_RNA-Seq STX8-RTN1 STX8 chr17 9281868 - RTN1 chr14 60074210 - Exonic hg19 PAAD TCGA-3A-A9J0 2 In-Frame Inter-chr p13.1 q23.1 Seq+ 10921 ChimerSeq FusionScan TCGA_RNA-Seq LAMA5-CABLES2 LAMA5 chr20 60926759 - CABLES2 chr20 60971648 - Exonic hg19 PAAD TCGA-IB-7644 5 In-Frame Intra-chr q13.33 q13.33 Seq+ 10922 ChimerSeq FusionScan TCGA_RNA-Seq BGN-MYL6 BGN chrX 152772643 + MYL6 chr12 56552467 + Exonic hg19 PAAD TCGA-HZ-7926 2 In-Frame Inter-chr q28 q13.2 10923 ChimerSeq FusionScan TCGA_RNA-Seq CTRB1-KLK10 CTRB1 chr16 75257526 + KLK10 chr19 51518208 - Exonic hg19 PAAD TCGA-HZ-8003 2 Out-of-Frame Inter-chr q23.1 q13.41 Tumor suppressor gene Seq+ 10924 ChimerSeq FusionScan TCGA_RNA-Seq CTRB1-CELA3B CTRB1 chr16 75257526 + CELA3B chr1 22313023 + Exonic hg19 PAAD TCGA-HZ-8003 2 Out-of-Frame Inter-chr q23.1 p36.12 10925 ChimerSeq FusionScan TCGA_RNA-Seq CTRB2-KLK10 CTRB2 chr16 75239230 - KLK10 chr19 51518208 - Exonic hg19 PAAD TCGA-HZ-8003 2 Out-of-Frame Inter-chr q23.1 q13.41 Tumor suppressor gene 10926 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 PAAD TCGA-3A-A9IV 2 Out-of-Frame Intra-chr q22.2 q22.2 10927 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R13L-CCDC9 PPP1R13L chr19 45908256 - CCDC9 chr19 47769867 + Exonic hg19 PAAD TCGA-HZ-8315 5 5'UTR-CDS Intra-chr q13.32 q13.32 Seq+ 10928 ChimerSeq FusionScan TCGA_RNA-Seq TEX10-ANP32B TEX10 chr9 103102538 - ANP32B chr9 100756912 + Exonic hg19 PAAD TCGA-HZ-8315 3 Out-of-Frame Intra-chr q31.1 q22.33 10929 ChimerSeq FusionScan TCGA_RNA-Seq SH3GL1-UNC13B SH3GL1 chr19 4400320 - UNC13B chr9 35295692 + Exonic hg19 PAAD TCGA-HZ-8315 2 Out-of-Frame Inter-chr p13.3 p13.3 10930 ChimerSeq FusionScan TCGA_RNA-Seq MAD1L1-C7orf50 MAD1L1 chr7 1937835 - C7orf50 chr7 1049779 - Exonic hg19 PAAD TCGA-FB-AAQ2 2 In-Frame Intra-chr p22.3 Tumor suppressor gene p22.3 10931 ChimerSeq FusionScan TCGA_RNA-Seq CREB3-TMEM8B CREB3 chr9 35733482 + TMEM8B chr9 35845971 + Exonic hg19 PAAD TCGA-IB-A5ST 2 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 10932 ChimerSeq FusionScan TCGA_RNA-Seq DSTN-PLK1S1 DSTN chr20 17581690 + PLK1S1 chr20 21209648 + Exonic hg19 PAAD TCGA-2L-AAQE 2 Out-of-Frame Intra-chr p12.1 Seq+ 10933 ChimerSeq FusionScan TCGA_RNA-Seq MKL2-PARN MKL2 chr16 14234617 + PARN chr16 14576684 - Exonic hg19 PAAD TCGA-HZ-8519 2 In-Frame Intra-chr p13.12 Seq+ 10934 ChimerSeq FusionScan TCGA_RNA-Seq THUMPD2-RALGAPA1 THUMPD2 chr2 40006253 - RALGAPA1 chr14 36104804 - Exonic hg19 PAAD TCGA-HZ-8519 2 In-Frame Inter-chr p22.1 q13.2 10935 ChimerSeq FusionScan TCGA_RNA-Seq SPATS2L-MPP6 SPATS2L chr2 201194203 + MPP6 chr7 24720010 + Exonic hg19 PAAD TCGA-HZ-8519 2 5'UTR-CDS Inter-chr q33.1 p15.3 10936 ChimerSeq FusionScan TCGA_RNA-Seq TP53BP2-CAPN2 TP53BP2 chr1 223976709 - CAPN2 chr1 223931801 + Exonic hg19 PAAD TCGA-HZ-8519 2 In-Frame Intra-chr q41 Tumor suppressor gene q41 10937 ChimerSeq FusionScan TCGA_RNA-Seq MTAP-PTPRD MTAP chr9 21838009 + PTPRD chr9 9766851 - Exonic hg19 PAAD TCGA-US-A779 6 CDS-5'UTR Intra-chr p21.3 Tumor suppressor gene Oncogene Tumor suppressor gene Seq+ 10938 ChimerSeq FusionScan TCGA_RNA-Seq HACE1-PLEKHG1 HACE1 chr6 105291097 - PLEKHG1 chr6 150971863 + Exonic hg19 PAAD TCGA-H6-8124 2 CDS-5'UTR Intra-chr q16.3 Tumor suppressor gene q25.1 10939 ChimerSeq FusionScan TCGA_RNA-Seq GTF2IRD1-CCDC146 GTF2IRD1 chr7 73868506 + CCDC146 chr7 76796974 + Exonic hg19 PAAD TCGA-H6-8124 2 5'UTR-5'UTR Intra-chr q11.23 Transcription factor q11.23 Seq+ 10940 ChimerSeq FusionScan TCGA_RNA-Seq PPA2-CD47 PPA2 chr4 106367539 - CD47 chr3 107766139 - Exonic hg19 PAAD TCGA-HZ-8636 2 In-Frame Inter-chr q24 q13.12 10941 ChimerSeq FusionScan TCGA_RNA-Seq FRMD4B-OXCT1 FRMD4B chr3 69271008 - OXCT1 chr5 41801172 - Exonic hg19 PAAD TCGA-HZ-8636 2 Out-of-Frame Inter-chr p14.1 p13.1 Seq+ 10942 ChimerSeq FusionScan TCGA_RNA-Seq SNRPN-SNURF SNRPN chr15 25131736 + SNURF chr15 25207260 + Exonic hg19 PCPG TCGA-WB-A817 2 5'UTR-CDS Intra-chr q11.2 q11.2 10943 ChimerSeq FusionScan TCGA_RNA-Seq GFRA3-TTC8 GFRA3 chr5 137588975 - TTC8 chr14 89341369 + Exonic hg19 PCPG TCGA-TT-A6YN 5 In-Frame Inter-chr q31.2 q31.3 Seq+ 10944 ChimerSeq FusionScan TCGA_RNA-Seq GFRA3-TTC8 GFRA3 chr5 137589454 - TTC8 chr14 89341369 + Exonic hg19 PCPG TCGA-TT-A6YN 3 Out-of-Frame Inter-chr q31.2 q31.3 Seq+ 10945 ChimerSeq FusionScan TCGA_RNA-Seq GFRA3-TTC8 GFRA3 chr5 137593327 - TTC8 chr14 89341369 + Exonic hg19 PCPG TCGA-TT-A6YN 3 Out-of-Frame Inter-chr q31.2 q31.3 Seq+ 10946 ChimerSeq FusionScan TCGA_RNA-Seq TNRC6A-LIX1L TNRC6A chr16 24809287 + LIX1L chr1 145492234 + Exonic hg19 PCPG TCGA-TT-A6YN 3 Out-of-Frame Inter-chr p12.1 q21.1 Seq+ 10947 ChimerSeq FusionScan TCGA_RNA-Seq GFRA3-TTC8 GFRA3 chr5 137588975 - TTC8 chr14 89343637 + Exonic hg19 PCPG TCGA-TT-A6YN 2 In-Frame Inter-chr q31.2 q31.3 Seq+ 10948 ChimerSeq FusionScan TCGA_RNA-Seq CCRN4L-MGST2 CCRN4L chr4 139937325 + MGST2 chr4 140599696 + Exonic hg19 PCPG TCGA-QT-A5XJ 3 In-Frame Intra-chr q31.1 Seq+ 10949 ChimerSeq FusionScan TCGA_RNA-Seq CCRN4L-MGST2 CCRN4L chr4 139937325 + MGST2 chr4 140616350 + Exonic hg19 PCPG TCGA-QT-A5XJ 2 Out-of-Frame Intra-chr q31.1 Seq+ 10950 ChimerSeq FusionScan TCGA_RNA-Seq PSIP1-TBL1X PSIP1 chr9 15486003 - TBL1X chrX 9621584 + Exonic hg19 PCPG TCGA-QT-A5XJ 2 CDS-5'UTR Inter-chr p22.3 Oncogene p22.31 Seq+ 10951 ChimerSeq FusionScan TCGA_RNA-Seq APIP-S100A13 APIP chr11 34937774 - S100A13 chr1 153599009 - Exonic hg19 PCPG TCGA-RW-A686 2 CDS-5'UTR Inter-chr p13 q21.3 Seq+ 10952 ChimerSeq FusionScan TCGA_RNA-Seq STAU2-RALYL STAU2 chr8 74585341 - RALYL chr8 85762214 + Exonic hg19 PCPG TCGA-RW-A686 2 In-Frame Intra-chr q21.11 q21.2 Seq+ 10953 ChimerSeq FusionScan TCGA_RNA-Seq ERC2-TXNL4A ERC2 chr3 56502275 - TXNL4A chr18 77737701 - Exonic hg19 PCPG TCGA-QR-A6H5 2 5'UTR-CDS Inter-chr p14.3 q23 10954 ChimerSeq FusionScan TCGA_RNA-Seq NFAT5-CYB5B NFAT5 chr16 69600277 + CYB5B chr16 69481052 + Exonic hg19 PCPG TCGA-QT-A5XO 6 Out-of-Frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 10955 ChimerSeq FusionScan TCGA_RNA-Seq NFAT5-CYB5B NFAT5 chr16 69602451 + CYB5B chr16 69481052 + Exonic hg19 PCPG TCGA-QT-A5XO 2 Out-of-Frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 10956 ChimerSeq FusionScan TCGA_RNA-Seq PTPRN2-GTF2I PTPRN2 chr7 158282426 - GTF2I chr7 74103457 + Exonic hg19 PCPG TCGA-S7-A7WQ 2 CDS-5'UTR Intra-chr q36.3 q11.23 Transcription factor 10957 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 PCPG TCGA-RW-A681 2 Out-of-Frame Intra-chr q22.2 q22.2 10958 ChimerSeq FusionScan TCGA_RNA-Seq EXOSC1-RRP12 EXOSC1 chr10 99200927 - RRP12 chr10 99150601 - Exonic hg19 PCPG TCGA-WB-A81N 3 In-Frame Intra-chr q24.1 q24.1 10959 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1737-NGFR KIAA1737 chr14 77564704 + NGFR chr17 47579424 + Exonic hg19 PCPG TCGA-QT-A5XN 4 5'UTR-CDS Inter-chr q21.33 Tumor suppressor gene Seq+ 10960 ChimerSeq FusionScan TCGA_RNA-Seq TTC39A-FGGY TTC39A chr1 51787392 - FGGY chr1 59977982 + Exonic hg19 PCPG TCGA-QT-A5XN 2 Out-of-Frame Intra-chr p32.3 p32.1 Seq+ 10961 ChimerSeq FusionScan TCGA_RNA-Seq FNDC3A-WRAP53 FNDC3A chr13 49720071 + WRAP53 chr17 7606560 + Exonic hg19 PCPG TCGA-WB-A81T 2 In-Frame Inter-chr q14.2 p13.1 10962 ChimerSeq FusionScan TCGA_RNA-Seq INTS4L2-KSR1 INTS4L2 chr7 65112960 + KSR1 chr17 25877593 + Exonic hg19 PCPG TCGA-QT-A7U0 2 5'UTR-5'UTR Inter-chr q11.2 TKL:RAF 10963 ChimerSeq FusionScan TCGA_RNA-Seq SNRPN-SNURF SNRPN chr15 25131736 + SNURF chr15 25207260 + Exonic hg19 PCPG TCGA-W2-A7H5 2 5'UTR-CDS Intra-chr q11.2 q11.2 10964 ChimerSeq FusionScan TCGA_RNA-Seq NCK1-IL20RB NCK1 chr3 136647069 + IL20RB chr3 136699307 + Exonic hg19 PCPG TCGA-QR-A70P 2 In-Frame Intra-chr q22.3 q22.3 Seq+ 10965 ChimerSeq FusionScan TCGA_RNA-Seq EP400NL-NOC4L EP400NL chr12 132568944 + NOC4L chr12 132635525 + Exonic hg19 PCPG TCGA-QR-A70A 2 5'UTR-CDS Intra-chr q24.33 q24.33 10966 ChimerSeq FusionScan TCGA_RNA-Seq UBTF-MAML3 UBTF chr17 42286719 - MAML3 chr4 140812121 - Exonic hg19 PCPG TCGA-WB-A80K 5 In-Frame Inter-chr q21.31 q31.1 Seq+ 10967 ChimerSeq FusionScan TCGA_RNA-Seq MAML3-FAM171A2 MAML3 chr4 141074013 - FAM171A2 chr17 42433956 - Exonic hg19 PCPG TCGA-WB-A80K 3 Out-of-Frame Inter-chr q31.1 q21.31 Seq+ 10968 ChimerSeq FusionScan TCGA_RNA-Seq MGRN1-RNPS1 MGRN1 chr16 4675049 + RNPS1 chr16 2314761 - Exonic hg19 PCPG TCGA-WB-A80K 2 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 10969 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 PCPG TCGA-RM-A68T 2 Out-of-Frame Intra-chr q22.2 q22.2 10970 ChimerSeq FusionScan TCGA_RNA-Seq AMPD3-ANKH AMPD3 chr11 10523137 + ANKH chr5 14711419 - Exonic hg19 PCPG TCGA-WB-A81H 3 In-Frame Inter-chr p15.4 p15.2 Seq+ 10971 ChimerSeq FusionScan TCGA_RNA-Seq TRAF3-ITPK1 TRAF3 chr14 103342862 + ITPK1 chr14 93424711 - Exonic hg19 PCPG TCGA-S7-A7WM 4 In-Frame Intra-chr q32.32 Seq+ 10972 ChimerSeq FusionScan TCGA_RNA-Seq SF1-GNAS SF1 chr11 64543969 - GNAS chr20 57470666 + Exonic hg19 PCPG TCGA-QR-A6H2 2 In-Frame Inter-chr q13.1 q13.32 Oncogene Seq+ 10973 ChimerSeq FusionScan TCGA_RNA-Seq GPC1-NOC4L GPC1 chr2 241375501 + NOC4L chr12 132635802 + Exonic hg19 PCPG TCGA-QT-A5XP 2 Out-of-Frame Inter-chr q37.3 q24.33 10974 ChimerSeq FusionScan TCGA_RNA-Seq EML1-MEG3 EML1 chr14 100363631 + MEG3 chr14 101311794 + Exonic hg19 PCPG TCGA-QR-A70J 4 CDS-5'UTR Intra-chr q32.2 q32.2 Tumor suppressor gene Seq+ 10975 ChimerSeq FusionScan TCGA_RNA-Seq NFAT5-CYB5B NFAT5 chr16 69600277 + CYB5B chr16 69481052 + Exonic hg19 PCPG TCGA-QT-A5XO 3 Out-of-Frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 10976 ChimerSeq FusionScan TCGA_RNA-Seq KDM4B-PHYHIPL KDM4B chr19 5082515 + PHYHIPL chr10 61004816 + Exonic hg19 PCPG TCGA-WB-A80M 2 Out-of-Frame Inter-chr p13.3 q21.1 Seq+ 10977 ChimerSeq FusionScan TCGA_RNA-Seq HAND2-SLC30A9 HAND2 chr4 174449885 - SLC30A9 chr4 42041002 + Exonic hg19 PCPG TCGA-SP-A6QI 6 In-Frame Intra-chr q34.1 Transcription factor p13 Seq+ 10978 ChimerSeq FusionScan TCGA_RNA-Seq MAML3-FAM171A2 MAML3 chr4 141074013 - FAM171A2 chr17 42433956 - Exonic hg19 PCPG TCGA-WB-A80K 2 Out-of-Frame Inter-chr q31.1 q21.31 Seq+ 10979 ChimerSeq FusionScan TCGA_RNA-Seq MATR3-PAIP2 MATR3 chr5 138629494 + PAIP2 chr5 138699447 + Exonic hg19 PCPG TCGA-QR-A6H6 2 5'UTR-5'UTR Intra-chr q31.2 q31.2 Tumor suppressor gene 10980 ChimerSeq FusionScan TCGA_RNA-Seq EXOSC1-RRP12 EXOSC1 chr10 99200927 - RRP12 chr10 99150601 - Exonic hg19 PCPG TCGA-WB-A81N 2 In-Frame Intra-chr q24.1 q24.1 10981 ChimerSeq FusionScan TCGA_RNA-Seq RNF216-RSPH10B RNF216 chr7 5778906 - RSPH10B chr7 6837993 + Exonic hg19 PCPG TCGA-W2-A7HD 2 In-Frame Intra-chr p22.1 p22.1 10982 ChimerSeq FusionScan TCGA_RNA-Seq TRAF3-ITPK1 TRAF3 chr14 103342862 + ITPK1 chr14 93424711 - Exonic hg19 PCPG TCGA-S7-A7WM 4 In-Frame Intra-chr q32.32 Seq+ 10983 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 PCPG TCGA-RM-A68W 2 Out-of-Frame Intra-chr q22.2 q22.2 10984 ChimerSeq FusionScan TCGA_RNA-Seq UBE2W-STAU2 UBE2W chr8 74791042 - STAU2 chr8 74334937 - Exonic hg19 PCPG TCGA-RW-A68F 2 In-Frame Intra-chr q21.11 q21.11 Seq+ 10985 ChimerSeq FusionScan TCGA_RNA-Seq APIP-S100A13 APIP chr11 34937774 - S100A13 chr1 153599009 - Exonic hg19 PCPG TCGA-RW-A686 2 CDS-5'UTR Inter-chr p13 q21.3 Seq+ 10986 ChimerSeq FusionScan TCGA_RNA-Seq SNTG1-CHCHD7 SNTG1 chr8 51503477 + CHCHD7 chr8 57127156 + Exonic hg19 PRAD TCGA-CH-5788 2 Out-of-Frame Intra-chr q11.21 q12.1 10987 ChimerSeq FusionScan TCGA_RNA-Seq APC-KIAA0825 APC chr5 112128226 + KIAA0825 chr5 93489829 - Exonic hg19 PRAD TCGA-CH-5788 2 Out-of-Frame Intra-chr q22.2 Oncogene Tumor suppressor gene q15 Seq+ 10988 ChimerSeq FusionScan TCGA_RNA-Seq RNF10-FBL RNF10 chr12 120972771 + FBL chr19 40325453 - Exonic hg19 PRAD TCGA-G9-6378 4 Out-of-Frame Inter-chr q24.31 Seq+ 10989 ChimerSeq FusionScan TCGA_RNA-Seq DIAPH3-DOK5 DIAPH3 chr13 60582677 - DOK5 chr20 53266953 + Exonic hg19 PRAD TCGA-KK-A59V 2 Out-of-Frame Inter-chr q21.2 q13.2 10990 ChimerSeq FusionScan TCGA_RNA-Seq SLC19A1-SNX4 SLC19A1 chr21 46957684 - SNX4 chr3 125195600 - Exonic hg19 PRAD TCGA-KK-A59V 2 In-Frame Inter-chr q22.3 q21.2 10991 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD22-LRRTM3 ANKRD22 chr10 90611343 - LRRTM3 chr10 68857344 + Exonic hg19 PRAD TCGA-XQ-A8TB 4 In-Frame Intra-chr q23.31 q21.3 Seq+ 10992 ChimerSeq FusionScan TCGA_RNA-Seq ACPP-TRPM4 ACPP chr3 132075699 + TRPM4 chr19 49705220 + Exonic hg19 PRAD TCGA-EJ-A65M 2 In-Frame Inter-chr q22.1 q13.33 10993 ChimerSeq FusionScan TCGA_RNA-Seq DSG2-TTR DSG2 chr18 29078259 + TTR chr18 29172858 + Exonic hg19 PRAD TCGA-ZG-A9N3 6 In-Frame Intra-chr q12.1 q12.1 Seq+ 10994 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649521 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-HC-A6AQ 2 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 10995 ChimerSeq FusionScan TCGA_RNA-Seq ARF1-HSPA9 ARF1 chr1 228270466 + HSPA9 chr5 137904738 - Exonic hg19 PRAD TCGA-KK-A6E1 6 5'UTR-CDS Inter-chr q42.13 Tumor suppressor gene q31.2 Seq+ 10996 ChimerSeq FusionScan TCGA_RNA-Seq RYK-KALRN RYK chr3 133907680 - KALRN chr3 124149502 + Exonic hg19 PRAD TCGA-KK-A6E1 5 Out-of-Frame Intra-chr q22.2 TK:Ryk q21.1 Seq+ 10997 ChimerSeq FusionScan TCGA_RNA-Seq ERG-KCNJ6 ERG chr21 39947585 - KCNJ6 chr21 38997786 - Exonic hg19 PRAD TCGA-KK-A6E1 4 Out-of-Frame Intra-chr q22.2 Oncogene Transcription factor q22.13 Seq+ 10998 ChimerSeq FusionScan TCGA_RNA-Seq PLA2G16-SNHG1 PLA2G16 chr11 63365532 - SNHG1 chr11 62621305 - Exonic hg19 PRAD TCGA-KK-A6E1 3 CDS-3'UTR Intra-chr q13.1 Tumor suppressor gene q12.3 Seq+ 10999 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D25-HSPA9 TBC1D25 chrX 48399830 + HSPA9 chr5 137897478 - Exonic hg19 PRAD TCGA-KK-A6E1 2 Out-of-Frame Inter-chr p11.23 q31.2 Seq+ 11000 ChimerSeq FusionScan TCGA_RNA-Seq FAU-SRRM1 FAU chr11 64888452 - SRRM1 chr1 24975349 + Exonic hg19 PRAD TCGA-KK-A6E1 2 In-Frame Inter-chr q13.1 p36.11 Seq+ 11001 ChimerSeq FusionScan TCGA_RNA-Seq ATP11B-CARS ATP11B chr3 182563310 + CARS chr11 3026663 - Exonic hg19 PRAD TCGA-EJ-5507 10 In-Frame Inter-chr q26.33 Oncogene Seq+ 11002 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-PIK3CA TBL1XR1 chr3 176914908 - PIK3CA chr3 178916537 + Exonic hg19 PRAD TCGA-EJ-5507 3 5'UTR-5'UTR Intra-chr q26.32 q26.32 Oncogene Seq+ 11003 ChimerSeq FusionScan TCGA_RNA-Seq ATP11B-CARS ATP11B chr3 182566345 + CARS chr11 3026663 - Exonic hg19 PRAD TCGA-EJ-5507 2 Out-of-Frame Inter-chr q26.33 Oncogene Seq+ 11004 ChimerSeq FusionScan TCGA_RNA-Seq NAA25-WSCD2 NAA25 chr12 112546519 - WSCD2 chr12 108620766 + Exonic hg19 PRAD TCGA-HC-7230 2 Out-of-Frame Intra-chr q24.13 q23.3 Seq+ 11005 ChimerSeq FusionScan TCGA_RNA-Seq PEX14-HMOX2 PEX14 chr1 10596354 + HMOX2 chr16 4555484 + Exonic hg19 PRAD TCGA-CH-5768 5 CDS-5'UTR Inter-chr p36.22 p13.3 Seq+ 11006 ChimerSeq FusionScan TCGA_RNA-Seq PHF3-R3HCC1 PHF3 chr6 64356700 + R3HCC1 chr8 23146018 + Exonic hg19 PRAD TCGA-KK-A8I4 2 CDS-5'UTR Inter-chr q12 p21.3 Seq+ 11007 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-MLLT3 TMPRSS2 chr21 42851098 - MLLT3 chr9 20620833 - Exonic hg19 PRAD TCGA-ZG-A9L1 5 Out-of-Frame Inter-chr q22.3 p21.3 Seq+ 11008 ChimerSeq FusionScan TCGA_RNA-Seq ACTN4-TIMM50 ACTN4 chr19 39138547 + TIMM50 chr19 39976327 + Exonic hg19 PRAD TCGA-ZG-A9L1 3 In-Frame Intra-chr q13.2 Seq+ 11009 ChimerSeq FusionScan TCGA_RNA-Seq ACTN4-TIMM50 ACTN4 chr19 39138547 + TIMM50 chr19 39978700 + Exonic hg19 PRAD TCGA-ZG-A9L1 3 In-Frame Intra-chr q13.2 Seq+ 11010 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41623036 - Exonic hg19 PRAD TCGA-KC-A7FD 14 5'UTR-5'UTR Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11011 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-KC-A7FD 14 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11012 ChimerSeq FusionScan TCGA_RNA-Seq CTNND1-AMACR CTNND1 chr11 57529518 + AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-KC-A7FD 2 5'UTR-CDS Inter-chr q12.1 Tumor suppressor gene p13.2 11013 ChimerSeq FusionScan TCGA_RNA-Seq EIF5A-MRPL39 EIF5A chr17 7214970 + MRPL39 chr21 26969726 - Exonic hg19 PRAD TCGA-KC-A7FD 2 3'UTR-CDS Inter-chr p13.1 q21.3 11014 ChimerSeq FusionScan TCGA_RNA-Seq CPE-AMACR CPE chr4 166300680 + AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-KC-A7FD 2 In-Frame Inter-chr q32.3 p13.2 11015 ChimerSeq FusionScan TCGA_RNA-Seq MRPL39-SLC35G6 MRPL39 chr21 26972110 - SLC35G6 chr17 7385306 + Exonic hg19 PRAD TCGA-KC-A7FD 2 In-Frame Inter-chr q21.3 Seq+ 11016 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41613847 - Exonic hg19 PRAD TCGA-KC-A7FD 2 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11017 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42879876 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-KC-A7FD 2 Out-of-Frame Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11018 ChimerSeq FusionScan TCGA_RNA-Seq SLC9A9-PDLIM3 SLC9A9 chr3 143513842 - PDLIM3 chr4 186427806 - Exonic hg19 PRAD TCGA-4L-AA1F 2 In-Frame Inter-chr q24 q35.1 Seq+ 11019 ChimerSeq FusionScan TCGA_RNA-Seq ACPP-MYC ACPP chr3 132051188 + MYC chr8 128750493 + Exonic hg19 PRAD TCGA-G9-6366 8 In-Frame Inter-chr q22.1 q24.21 Oncogene Transcription factor Seq+ 11020 ChimerSeq FusionScan TCGA_RNA-Seq ZNF626-MPHOSPH8 ZNF626 chr19 20844249 - MPHOSPH8 chr13 20245345 + Exonic hg19 PRAD TCGA-G9-6366 2 In-Frame Inter-chr p12 Transcription factor q12.11 11021 ChimerSeq FusionScan TCGA_RNA-Seq WWC1-SNTG2 WWC1 chr5 167841595 + SNTG2 chr2 1161233 + Exonic hg19 PRAD TCGA-J4-A83J 4 Out-of-Frame Inter-chr q34 Seq+ 11022 ChimerSeq FusionScan TCGA_RNA-Seq KIF5B-HHAT KIF5B chr10 32337391 - HHAT chr1 210637848 + Exonic hg19 PRAD TCGA-VN-A88L 2 In-Frame Inter-chr p11.22 Seq+ 11023 ChimerSeq FusionScan TCGA_RNA-Seq ERG-RPS18 ERG chr21 39947585 - RPS18 chr6 33240404 + Exonic hg19 PRAD TCGA-VN-A88L 2 CDS-3'UTR Inter-chr q22.2 Oncogene Transcription factor Seq+ 11024 ChimerSeq FusionScan TCGA_RNA-Seq TRIO-IQUB TRIO chr5 14304701 + IQUB chr7 123097620 - Exonic hg19 PRAD TCGA-CH-5741 3 In-Frame Inter-chr p15.2 q31.32 Seq+ 11025 ChimerSeq FusionScan TCGA_RNA-Seq C3orf78-AMACR C3orf78 chr3 52570922 + AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-HC-7749 2 In-Frame Inter-chr p13.2 11026 ChimerSeq FusionScan TCGA_RNA-Seq RHBDD1-AMACR RHBDD1 chr2 227779067 + AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-HC-7749 2 In-Frame Inter-chr q36.3 p13.2 11027 ChimerSeq FusionScan TCGA_RNA-Seq ZNF350-PPAP2A ZNF350 chr19 52490022 - PPAP2A chr5 54737736 - Exonic hg19 PRAD TCGA-HC-7749 2 5'UTR-CDS Inter-chr q13.41 Transcription factor 11028 ChimerSeq FusionScan TCGA_RNA-Seq MBNL1-NMNAT3 MBNL1 chr3 151986881 + NMNAT3 chr3 139297897 - Exonic hg19 PRAD TCGA-EJ-7792 6 5'UTR-5'UTR Intra-chr q25.1 q23 Seq+ 11029 ChimerSeq FusionScan TCGA_RNA-Seq GALNT7-CHIC2 GALNT7 chr4 174169591 + CHIC2 chr4 54915472 - Exonic hg19 PRAD TCGA-EJ-7792 2 In-Frame Intra-chr q34.1 q12 11030 ChimerSeq FusionScan TCGA_RNA-Seq BLCAP-AMACR BLCAP chr20 36156194 - AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-EJ-7792 2 5'UTR-CDS Inter-chr q11.23 Tumor suppressor gene p13.2 11031 ChimerSeq FusionScan TCGA_RNA-Seq KDM2A-C11orf80 KDM2A chr11 66888829 + C11orf80 chr11 66555630 + Exonic hg19 PRAD TCGA-EJ-A46G 8 Out-of-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 11032 ChimerSeq FusionScan TCGA_RNA-Seq LPHN2-AK5 LPHN2 chr1 82302742 + AK5 chr1 77759477 + Exonic hg19 PRAD TCGA-EJ-A46G 6 In-Frame Intra-chr p31.1 Seq+ 11033 ChimerSeq FusionScan TCGA_RNA-Seq ARID1A-HMGN2 ARID1A chr1 27024031 + HMGN2 chr1 26799973 + Exonic hg19 PRAD TCGA-EJ-A46G 5 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 Seq+ 11034 ChimerSeq FusionScan TCGA_RNA-Seq KDM2A-C11orf80 KDM2A chr11 66888829 + C11orf80 chr11 66563751 + Exonic hg19 PRAD TCGA-EJ-A46G 3 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 11035 ChimerSeq FusionScan TCGA_RNA-Seq PAK1-NARS2 PAK1 chr11 77184596 - NARS2 chr11 78282489 - Exonic hg19 PRAD TCGA-EJ-A46G 3 5'UTR-5'UTR Intra-chr q14.1 STE:STE20 q14.1 Seq+ 11036 ChimerSeq FusionScan TCGA_RNA-Seq EHMT1-GRIN1 EHMT1 chr9 140707982 + GRIN1 chr9 140036464 + Exonic hg19 PRAD TCGA-EJ-A46G 2 In-Frame Intra-chr q34.3 q34.3 Seq+ 11037 ChimerSeq FusionScan TCGA_RNA-Seq EHMT1-C9orf86 EHMT1 chr9 140513501 + C9orf86 chr9 139730193 + Exonic hg19 PRAD TCGA-EJ-A46G 2 In-Frame Intra-chr q34.3 11038 ChimerSeq FusionScan TCGA_RNA-Seq FRYL-OCIAD2 FRYL chr4 48686689 - OCIAD2 chr4 48887582 - Exonic hg19 PRAD TCGA-EJ-A46G 2 5'UTR-CDS Intra-chr p11 p11 Seq+ 11039 ChimerSeq FusionScan TCGA_RNA-Seq KDM2A-C11orf80 KDM2A chr11 66888829 + C11orf80 chr11 66568111 + Exonic hg19 PRAD TCGA-EJ-A46G 2 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 11040 ChimerSeq FusionScan TCGA_RNA-Seq PRR15L-RAB5C PRR15L chr17 46035022 - RAB5C chr17 40282608 - Exonic hg19 PRAD TCGA-G9-6348 3 5'UTR-5'UTR Intra-chr q21.32 q21.2 Seq+ 11041 ChimerSeq FusionScan TCGA_RNA-Seq PRR15L-KCNH4 PRR15L chr17 46035022 - KCNH4 chr17 40309136 - Exonic hg19 PRAD TCGA-G9-6348 3 5'UTR-3'UTR Intra-chr q21.32 q21.2 Seq+ 11042 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-NUP93 CPSF6 chr12 69656342 + NUP93 chr16 56839415 + Exonic hg19 PRAD TCGA-G9-6348 2 3'UTR-CDS Inter-chr q15 q13 11043 ChimerSeq FusionScan TCGA_RNA-Seq CCAR1-AMACR CCAR1 chr10 70532856 + AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-G9-6348 2 In-Frame Inter-chr q21.3 Tumor suppressor gene p13.2 11044 ChimerSeq FusionScan TCGA_RNA-Seq FAM217B-CDH12 FAM217B chr20 58517567 + CDH12 chr5 21975494 - Exonic hg19 PRAD TCGA-G9-6348 2 5'UTR-CDS Inter-chr q13.33 p14.3 Seq+ 11045 ChimerSeq FusionScan TCGA_RNA-Seq SLC37A3-FLYWCH2 SLC37A3 chr7 140043211 - FLYWCH2 chr16 2945220 + Exonic hg19 PRAD TCGA-EJ-A7NN 4 CDS-5'UTR Inter-chr q34 p13.3 Seq+ 11046 ChimerSeq FusionScan TCGA_RNA-Seq CD46-FAM124A CD46 chr1 207959027 + FAM124A chr13 51805483 + Exonic hg19 PRAD TCGA-EJ-A7NN 2 In-Frame Inter-chr q32.2 q14.3 11047 ChimerSeq FusionScan TCGA_RNA-Seq GAS5-C1orf98 GAS5 chr1 173835898 - C1orf98 chr1 200342297 - Exonic hg19 PRAD TCGA-EJ-A7NN 2 3'UTR-3'UTR Intra-chr q25.1 Tumor suppressor gene 11048 ChimerSeq FusionScan TCGA_RNA-Seq MED6-PSMC6 MED6 chr14 71059596 - PSMC6 chr14 53190682 + Exonic hg19 PRAD TCGA-FC-A66V 2 In-Frame Intra-chr q24.2 q22.1 11049 ChimerSeq FusionScan TCGA_RNA-Seq SERINC5-PPAP2A SERINC5 chr5 79551714 - PPAP2A chr5 54721867 - Exonic hg19 PRAD TCGA-HC-A6AS 7 In-Frame Intra-chr q14.1 Seq+ 11050 ChimerSeq FusionScan TCGA_RNA-Seq KIF2A-RNF180 KIF2A chr5 61602363 + RNF180 chr5 63665441 + Exonic hg19 PRAD TCGA-J9-A52D 3 In-Frame Intra-chr q12.1 q12.3 Tumor suppressor gene Seq+ 11051 ChimerSeq FusionScan TCGA_RNA-Seq FGFR3-AES FGFR3 chr4 1808661 + AES chr19 3061255 - Exonic hg19 PRAD TCGA-EJ-A7NM 7 In-Frame Inter-chr p16.3 TK:FGFR Oncogene p13.3 Seq+ 11052 ChimerSeq FusionScan TCGA_RNA-Seq APC-KIAA0825 APC chr5 112128226 + KIAA0825 chr5 93489829 - Exonic hg19 PRAD TCGA-CH-5788 2 Out-of-Frame Intra-chr q22.2 Oncogene Tumor suppressor gene q15 Seq+ 11053 ChimerSeq FusionScan TCGA_RNA-Seq SNTG1-CHCHD7 SNTG1 chr8 51503477 + CHCHD7 chr8 57127156 + Exonic hg19 PRAD TCGA-CH-5788 2 Out-of-Frame Intra-chr q11.21 q12.1 11054 ChimerSeq FusionScan TCGA_RNA-Seq SMYD3-TRIM58 SMYD3 chr1 246490502 - TRIM58 chr1 248023918 + Exonic hg19 PRAD TCGA-EJ-7789 2 In-Frame Intra-chr q44 Transcription factor q44 Seq+ 11055 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-G9-6371 20 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11056 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42879876 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-G9-6371 3 Out-of-Frame Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11057 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41613847 - Exonic hg19 PRAD TCGA-G9-6371 2 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11058 ChimerSeq FusionScan TCGA_RNA-Seq FIP1L1-SLC38A8 FIP1L1 chr4 54306775 + SLC38A8 chr16 84046657 - Exonic hg19 PRAD TCGA-EJ-A65B 5 In-Frame Inter-chr q12 q23.3 Seq+ 11059 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R12A-IMMT PPP1R12A chr12 80328474 - IMMT chr2 86408495 - Exonic hg19 PRAD TCGA-VN-A88P 2 In-Frame Inter-chr q21.31 p11.2 Seq+ 11060 ChimerSeq FusionScan TCGA_RNA-Seq SEC24A-C10orf11 SEC24A chr5 133984863 + C10orf11 chr10 77795765 + Exonic hg19 PRAD TCGA-YL-A8SA 3 Out-of-Frame Inter-chr q31.1 Seq+ 11061 ChimerSeq FusionScan TCGA_RNA-Seq PTEN-GRID1 PTEN chr10 89690846 + GRID1 chr10 87489371 - Exonic hg19 PRAD TCGA-YL-A8SA 3 Out-of-Frame Intra-chr q23.31 Oncogene Tumor suppressor gene q23.2 Seq+ 11062 ChimerSeq FusionScan TCGA_RNA-Seq HDLBP-TMC1 HDLBP chr2 242186470 - TMC1 chr9 75445366 + Exonic hg19 PRAD TCGA-HC-A631 7 Out-of-Frame Inter-chr q37.3 q21.13 Seq+ 11063 ChimerSeq FusionScan TCGA_RNA-Seq SF3B3-SLC7A6 SF3B3 chr16 70557831 + SLC7A6 chr16 68328607 + Exonic hg19 PRAD TCGA-HC-A631 2 5'UTR-CDS Intra-chr q22.1 q22.1 11064 ChimerSeq FusionScan TCGA_RNA-Seq DDX17-AARSD1 DDX17 chr22 38889714 - AARSD1 chr17 41109212 - Exonic hg19 PRAD TCGA-HC-A631 2 In-Frame Inter-chr q13.1 q21.31 11065 ChimerSeq FusionScan TCGA_RNA-Seq MATR3-GNAI3 MATR3 chr5 138629494 + GNAI3 chr1 110116358 + Exonic hg19 PRAD TCGA-CH-5746 2 5'UTR-CDS Inter-chr q31.2 p13.3 11066 ChimerSeq FusionScan TCGA_RNA-Seq AFF4-DTWD2 AFF4 chr5 132298950 - DTWD2 chr5 118183913 - Exonic hg19 PRAD TCGA-CH-5744 4 5'UTR-CDS Intra-chr q31.1 q23.1 Seq+ 11067 ChimerSeq FusionScan TCGA_RNA-Seq ERG-CDHR2 ERG chr21 39947585 - CDHR2 chr5 175992338 + Exonic hg19 PRAD TCGA-CH-5744 2 5'UTR-5'UTR Inter-chr q22.2 Oncogene Transcription factor q35.2 Seq+ 11068 ChimerSeq FusionScan TCGA_RNA-Seq GFOD2-TMEM241 GFOD2 chr16 67753065 - TMEM241 chr18 20936627 - Exonic hg19 PRAD TCGA-CH-5744 2 5'UTR-CDS Inter-chr q22.1 q11.2 Seq+ 11069 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-TNFRSF19 PVT1 chr8 128903244 + TNFRSF19 chr13 24242118 + Exonic hg19 PRAD TCGA-ZG-A8QW 2 5'UTR-CDS Inter-chr q24.21 q12.12 Seq+ 11070 ChimerSeq FusionScan TCGA_RNA-Seq C7orf44-AMPH C7orf44 chr7 43769027 - AMPH chr7 38574611 - Exonic hg19 PRAD TCGA-TP-A8TV 2 5'UTR-CDS Intra-chr p14.1 Seq+ 11071 ChimerSeq FusionScan TCGA_RNA-Seq IPO8-KRT86 IPO8 chr12 30837234 - KRT86 chr12 52702016 + Exonic hg19 PRAD TCGA-VP-A87D 4 In-Frame Intra-chr p11.21 q13.13 Seq+ 11072 ChimerSeq FusionScan TCGA_RNA-Seq GTF2E2-FBXO16 GTF2E2 chr8 30492548 - FBXO16 chr8 28286253 - Exonic hg19 PRAD TCGA-VP-A87D 2 Out-of-Frame Intra-chr p12 p21.1 Seq+ 11073 ChimerSeq FusionScan TCGA_RNA-Seq C3orf78-AMACR C3orf78 chr3 52570922 + AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-HC-7749 2 In-Frame Inter-chr p13.2 11074 ChimerSeq FusionScan TCGA_RNA-Seq RHBDD1-AMACR RHBDD1 chr2 227779067 + AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-HC-7749 2 In-Frame Inter-chr q36.3 p13.2 11075 ChimerSeq FusionScan TCGA_RNA-Seq ZNF350-PPAP2A ZNF350 chr19 52490022 - PPAP2A chr5 54737736 - Exonic hg19 PRAD TCGA-HC-7749 2 5'UTR-CDS Inter-chr q13.41 Transcription factor 11076 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649521 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-HC-7820 11 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 11077 ChimerSeq FusionScan TCGA_RNA-Seq OR51E2-AMACR OR51E2 chr11 4718882 - AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-HC-7820 2 5'UTR-CDS Inter-chr p15.4 p13.2 Seq+ 11078 ChimerSeq FusionScan TCGA_RNA-Seq CSPP1-CPA6 CSPP1 chr8 67976731 + CPA6 chr8 68346475 - Exonic hg19 PRAD TCGA-YL-A9WY 3 Out-of-Frame Intra-chr q13.1 q13.2 Seq+ 11079 ChimerSeq FusionScan TCGA_RNA-Seq NSF-ATP6V0E1 NSF chr17 44707816 + ATP6V0E1 chr5 172447240 + Exonic hg19 PRAD TCGA-YL-A9WY 2 Out-of-Frame Inter-chr q35.1 Seq+ 11080 ChimerSeq FusionScan TCGA_RNA-Seq NCALD-PAXIP1 NCALD chr8 102928036 - PAXIP1 chr7 154759620 - Exonic hg19 PRAD TCGA-YL-A9WY 2 5'UTR-CDS Inter-chr q22.3 q36.2 11081 ChimerSeq FusionScan TCGA_RNA-Seq USP6NL-ANKRD16 USP6NL chr10 11639629 - ANKRD16 chr10 5922339 - Exonic hg19 PRAD TCGA-YL-A9WY 2 Out-of-Frame Intra-chr p14 p15.1 Seq+ 11082 ChimerSeq FusionScan TCGA_RNA-Seq UBE3A-SNRPN UBE3A chr15 25683635 - SNRPN chr15 25207260 + Exonic hg19 PRAD TCGA-EJ-A65J 2 5'UTR-5'UTR Intra-chr q11.2 q11.2 11083 ChimerSeq FusionScan TCGA_RNA-Seq PPAP2A-CNTLN PPAP2A chr5 54830399 - CNTLN chr9 17484292 + Exonic hg19 PRAD TCGA-2A-A8VV 5 Out-of-Frame Inter-chr p22.2 Seq+ 11084 ChimerSeq FusionScan TCGA_RNA-Seq MZT2B-SOD2 MZT2B chr2 130940348 + SOD2 chr6 160106065 - Exonic hg19 PRAD TCGA-2A-A8VV 3 In-Frame Inter-chr q21.1 q25.3 Tumor suppressor gene 11085 ChimerSeq FusionScan TCGA_RNA-Seq SPTBN1-ECI2 SPTBN1 chr2 54826380 + ECI2 chr6 4133935 - Exonic hg19 PRAD TCGA-KK-A8II 2 CDS-5'UTR Inter-chr p16.2 Tumor suppressor gene p25.2 Seq+ 11086 ChimerSeq FusionScan TCGA_RNA-Seq PPAP2A-SMN2 PPAP2A chr5 54830399 - SMN2 chr5 69372845 + Exonic hg19 PRAD TCGA-V1-A8MJ 4 Out-of-Frame Intra-chr 11087 ChimerSeq FusionScan TCGA_RNA-Seq PPAP2A-SMN1 PPAP2A chr5 54830399 - SMN1 chr5 70248265 + Exonic hg19 PRAD TCGA-V1-A8MJ 4 CDS-3'UTR Intra-chr Seq+ 11088 ChimerSeq FusionScan TCGA_RNA-Seq PPAP2A-SMN1 PPAP2A chr5 54830399 - SMN1 chr5 70247767 + Exonic hg19 PRAD TCGA-V1-A8MJ 4 Out-of-Frame Intra-chr Seq+ 11089 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC14-IMPA2 ZCCHC14 chr16 87493613 - IMPA2 chr18 11999052 + Exonic hg19 PRAD TCGA-ZG-A9M4 2 Out-of-Frame Inter-chr q24.2 p11.21 Seq+ 11090 ChimerSeq FusionScan TCGA_RNA-Seq PRPSAP1-RBX1 PRPSAP1 chr17 74349614 - RBX1 chr22 41363802 + Exonic hg19 PRAD TCGA-G9-6379 2 Out-of-Frame Inter-chr q25.1 q13.2 11091 ChimerSeq FusionScan TCGA_RNA-Seq ALDH3A2-PITPNM2 ALDH3A2 chr17 19568360 + PITPNM2 chr12 123477216 - Exonic hg19 PRAD TCGA-G9-6494 2 In-Frame Inter-chr p11.2 q24.31 Seq+ 11092 ChimerSeq FusionScan TCGA_RNA-Seq HSD17B6-PATZ1 HSD17B6 chr12 57157198 + PATZ1 chr22 31738946 - Exonic hg19 PRAD TCGA-G9-6494 2 5'UTR-CDS Inter-chr q13.3 q12.2 Transcription factor 11093 ChimerSeq FusionScan TCGA_RNA-Seq C1orf135-TRPM8 C1orf135 chr1 26185770 - TRPM8 chr2 234904969 + Exonic hg19 PRAD TCGA-KK-A7AZ 4 Out-of-Frame Inter-chr q37.1 11094 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV5 TMPRSS2 chr21 42861433 - ETV5 chr3 185823731 - Exonic hg19 PRAD TCGA-KK-A7AZ 4 CDS-5'UTR Inter-chr q22.3 q27.2 Oncogene Transcription factor KB Pub Seq+ 11095 ChimerSeq FusionScan TCGA_RNA-Seq SLC4A4-C1orf135 SLC4A4 chr4 72263370 + C1orf135 chr1 26162337 - Exonic hg19 PRAD TCGA-KK-A7AZ 2 Out-of-Frame Inter-chr q13.3 Seq+ 11096 ChimerSeq FusionScan TCGA_RNA-Seq NEDD4L-ZC3H7A NEDD4L chr18 55919286 + ZC3H7A chr16 11876244 - Exonic hg19 PRAD TCGA-EJ-8470 2 5'UTR-5'UTR Inter-chr q21.31 Tumor suppressor gene p13.13 Seq+ 11097 ChimerSeq FusionScan TCGA_RNA-Seq NEDD4L-BCAR4 NEDD4L chr18 55919286 + BCAR4 chr16 11922248 - Exonic hg19 PRAD TCGA-EJ-8470 2 CDS-3'UTR Inter-chr q21.31 Tumor suppressor gene p13.13 Seq+ 11098 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649521 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-G9-7522 9 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 11099 ChimerSeq FusionScan TCGA_RNA-Seq ITGA5-C9orf3 ITGA5 chr12 54812764 - C9orf3 chr9 97848963 + Exonic hg19 PRAD TCGA-HC-8258 2 CDS-3'UTR Inter-chr q13.13 Tumor suppressor gene q22.32 11100 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1377-SRCAP KIAA1377 chr11 101818873 + SRCAP chr16 30740286 + Exonic hg19 PRAD TCGA-HC-8258 2 Out-of-Frame Inter-chr p11.2 Transcription factor 11101 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP21-WAC ARHGAP21 chr10 25010765 - WAC chr10 28872327 + Exonic hg19 PRAD TCGA-HC-8258 2 Out-of-Frame Intra-chr p12.1 p12.1 11102 ChimerSeq FusionScan TCGA_RNA-Seq IPO8-KRT86 IPO8 chr12 30837234 - KRT86 chr12 52702016 + Exonic hg19 PRAD TCGA-VP-A87D 4 In-Frame Intra-chr p11.21 q13.13 Seq+ 11103 ChimerSeq FusionScan TCGA_RNA-Seq GTF2E2-FBXO16 GTF2E2 chr8 30492548 - FBXO16 chr8 28286253 - Exonic hg19 PRAD TCGA-VP-A87D 2 Out-of-Frame Intra-chr p12 p21.1 Seq+ 11104 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649521 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-HC-A8CY 5 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 11105 ChimerSeq FusionScan TCGA_RNA-Seq PTPRM-MC2R PTPRM chr18 7774269 + MC2R chr18 13885645 - Exonic hg19 PRAD TCGA-HC-A8CY 2 CDS-5'UTR Intra-chr p11.23 p11.21 Seq+ 11106 ChimerSeq FusionScan TCGA_RNA-Seq KLK2-FGFR2 KLK2 chr19 51376775 + FGFR2 chr10 123310973 - Exonic hg19 PRAD TCGA-V1-A9O5 3 In-Frame Inter-chr q13.33 q26.13 TK:FGFR Oncogene KB Pub Seq+ 11107 ChimerSeq FusionScan TCGA_RNA-Seq CEP70-TNFSF10 CEP70 chr3 138216872 - TNFSF10 chr3 172227111 - Exonic hg19 PRAD TCGA-V1-A9O5 2 In-Frame Intra-chr q22.3 q26.31 Seq+ 11108 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-ADAM33 TBL1XR1 chr3 176914908 - ADAM33 chr20 3657790 - Exonic hg19 PRAD TCGA-EJ-8469 7 5'UTR-CDS Inter-chr q26.32 p13 Seq+ 11109 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-MRPS6 TMPRSS2 chr21 42845251 - MRPS6 chr21 35497640 + Exonic hg19 PRAD TCGA-EJ-8469 3 Out-of-Frame Intra-chr q22.3 q22.11 Seq+ 11110 ChimerSeq FusionScan TCGA_RNA-Seq DTD1-KIF16B DTD1 chr20 18608877 + KIF16B chr20 16496309 - Exonic hg19 PRAD TCGA-EJ-8469 2 In-Frame Intra-chr p11.23 p12.1 Seq+ 11111 ChimerSeq FusionScan TCGA_RNA-Seq GOLIM4-ZBBX GOLIM4 chr3 167812886 - ZBBX chr3 167000283 - Exonic hg19 PRAD TCGA-EJ-8469 2 In-Frame Intra-chr q26.2 q26.1 Seq+ 11112 ChimerSeq FusionScan TCGA_RNA-Seq KDM6A-ARHGAP6 KDM6A chrX 44918711 + ARHGAP6 chrX 11272827 - Exonic hg19 PRAD TCGA-EJ-8469 2 In-Frame Intra-chr p11.3 Oncogene Tumor suppressor gene p22.2 Seq+ 11113 ChimerSeq FusionScan TCGA_RNA-Seq MGC23284-BANP MGC23284 chr16 88729808 + BANP chr16 88052033 + Exonic hg19 PRAD TCGA-G9-6377 2 5'UTR-CDS Intra-chr q24.2 Tumor suppressor gene 11114 ChimerSeq FusionScan TCGA_RNA-Seq C11orf49-CD5 C11orf49 chr11 47074069 + CD5 chr11 60882527 + Exonic hg19 PRAD TCGA-G9-6377 2 In-Frame Intra-chr p11.2 q12.2 Seq+ 11115 ChimerSeq FusionScan TCGA_RNA-Seq VGLL4-AMACR VGLL4 chr3 11684910 - AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-G9-6377 2 In-Frame Inter-chr p25.2 p13.2 11116 ChimerSeq FusionScan TCGA_RNA-Seq MAPRE3-NRBP1 MAPRE3 chr2 27193670 + NRBP1 chr2 27662632 + Exonic hg19 PRAD TCGA-G9-6377 2 5'UTR-CDS Intra-chr p23.3 p23.3 Other:NRBP Tumor suppressor gene 11117 ChimerSeq FusionScan TCGA_RNA-Seq ZNHIT6-CFHR5 ZNHIT6 chr1 86167839 - CFHR5 chr1 196977616 + Exonic hg19 PRAD TCGA-KC-A7F3 2 Out-of-Frame Intra-chr p22.3 q31.3 11118 ChimerSeq FusionScan TCGA_RNA-Seq DYNC1LI1-MRPS11 DYNC1LI1 chr3 32582528 - MRPS11 chr15 89020219 + Exonic hg19 PRAD TCGA-G9-6354 4 In-Frame Inter-chr p22.3 q25.3 Seq+ 11119 ChimerSeq FusionScan TCGA_RNA-Seq NFIC-ZBTB7A NFIC chr19 3359683 + ZBTB7A chr19 4055245 - Exonic hg19 PRAD TCGA-G9-6354 2 CDS-5'UTR Intra-chr p13.3 Transcription factor p13.3 Transcription factor 11120 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649521 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-HC-A6AN 7 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 11121 ChimerSeq FusionScan TCGA_RNA-Seq IPPK-CDC26 IPPK chr9 95396667 - CDC26 chr9 116029719 - Exonic hg19 PRAD TCGA-HC-A6AN 2 In-Frame Intra-chr q22.31 q32 11122 ChimerSeq FusionScan TCGA_RNA-Seq PHF20-EPB41L1 PHF20 chr20 34389527 + EPB41L1 chr20 34763472 + Exonic hg19 PRAD TCGA-EJ-5499 2 Out-of-Frame Intra-chr q11.22 Transcription factor q11.23 Seq+ 11123 ChimerSeq FusionScan TCGA_RNA-Seq SLC9A3R1-FBXO18 SLC9A3R1 chr17 72745426 + FBXO18 chr10 5978418 + Exonic hg19 PRAD TCGA-EJ-7318 3 In-Frame Inter-chr q25.1 Tumor suppressor gene p15.1 Seq+ 11124 ChimerSeq FusionScan TCGA_RNA-Seq TMEM104-LIN52 TMEM104 chr17 72773514 + LIN52 chr14 74557934 + Exonic hg19 PRAD TCGA-EJ-7318 3 Out-of-Frame Inter-chr q25.1 q24.3 Seq+ 11125 ChimerSeq FusionScan TCGA_RNA-Seq PCA3-AMACR PCA3 chr9 79379471 + AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-EJ-7318 2 5'UTR-CDS Inter-chr q21.2 p13.2 11126 ChimerSeq FusionScan TCGA_RNA-Seq SLC37A3-FLYWCH2 SLC37A3 chr7 140043211 - FLYWCH2 chr16 2945220 + Exonic hg19 PRAD TCGA-EJ-A7NN 4 CDS-5'UTR Inter-chr q34 p13.3 Seq+ 11127 ChimerSeq FusionScan TCGA_RNA-Seq CD46-FAM124A CD46 chr1 207959027 + FAM124A chr13 51805483 + Exonic hg19 PRAD TCGA-EJ-A7NN 2 In-Frame Inter-chr q32.2 q14.3 11128 ChimerSeq FusionScan TCGA_RNA-Seq GAS5-C1orf98 GAS5 chr1 173835898 - C1orf98 chr1 200342297 - Exonic hg19 PRAD TCGA-EJ-A7NN 2 3'UTR-3'UTR Intra-chr q25.1 Tumor suppressor gene 11129 ChimerSeq FusionScan TCGA_RNA-Seq LEPROT-SGIP1 LEPROT chr1 65886423 + SGIP1 chr1 67184976 + Exonic hg19 PRAD TCGA-HC-7737 2 In-Frame Intra-chr p31.3 p31.3 Seq+ 11130 ChimerSeq FusionScan TCGA_RNA-Seq SPAST-MEMO1 SPAST chr2 32314674 + MEMO1 chr2 32168452 - Exonic hg19 PRAD TCGA-HC-7737 2 In-Frame Intra-chr p22.3 p22.3 Seq+ 11131 ChimerSeq FusionScan TCGA_RNA-Seq JARID2-ARHGAP39 JARID2 chr6 15374483 + ARHGAP39 chr8 145831080 - Exonic hg19 PRAD TCGA-G9-6356 2 CDS-5'UTR Inter-chr p22.3 q24.3 11132 ChimerSeq FusionScan TCGA_RNA-Seq GPATCH8-KRT25 GPATCH8 chr17 42512432 - KRT25 chr17 38904638 - Exonic hg19 PRAD TCGA-G9-6356 2 Out-of-Frame Intra-chr q21.31 q21.2 Seq+ 11133 ChimerSeq FusionScan TCGA_RNA-Seq KLK2-ETV1 KLK2 chr19 51376775 + ETV1 chr7 13971374 - Exonic hg19 PRAD TCGA-ZG-A9LY 8 Out-of-Frame Inter-chr q13.33 p21.2 Oncogene Transcription factor KB Seq+ 11134 ChimerSeq FusionScan TCGA_RNA-Seq KLK2-ETV1 KLK2 chr19 51378136 + ETV1 chr7 13971374 - Exonic hg19 PRAD TCGA-ZG-A9LY 7 In-Frame Inter-chr q13.33 p21.2 Oncogene Transcription factor KB Seq+ 11135 ChimerSeq FusionScan TCGA_RNA-Seq ATF6-VCL ATF6 chr1 161736232 + VCL chr10 75854028 + Exonic hg19 PRAD TCGA-ZG-A9LY 3 Out-of-Frame Inter-chr q23.3 Transcription factor q22.2 Seq+ 11136 ChimerSeq FusionScan TCGA_RNA-Seq LRP1-OS9 LRP1 chr12 57552421 + OS9 chr12 58114188 + Exonic hg19 PRAD TCGA-H9-A6BY 8 In-Frame Intra-chr q13.3 q13.3 Seq+ 11137 ChimerSeq FusionScan TCGA_RNA-Seq LRP1-OS9 LRP1 chr12 57552421 + OS9 chr12 58113881 + Exonic hg19 PRAD TCGA-H9-A6BY 4 In-Frame Intra-chr q13.3 q13.3 Seq+ 11138 ChimerSeq FusionScan TCGA_RNA-Seq SERBP1-JTB SERBP1 chr1 67891817 - JTB chr1 153947311 - Exonic hg19 PRAD TCGA-H9-A6BY 2 In-Frame Intra-chr p31.3 q21.3 11139 ChimerSeq FusionScan TCGA_RNA-Seq ACTN4-MGST2 ACTN4 chr19 39138547 + MGST2 chr4 140616350 + Exonic hg19 PRAD TCGA-EJ-A46E 2 Out-of-Frame Inter-chr q31.1 Seq+ 11140 ChimerSeq FusionScan TCGA_RNA-Seq DENND4C-RHOBTB2 DENND4C chr9 19357152 + RHOBTB2 chr8 22861937 + Exonic hg19 PRAD TCGA-EJ-7785 2 In-Frame Inter-chr p22.1 p21.3 Tumor suppressor gene Seq+ 11141 ChimerSeq FusionScan TCGA_RNA-Seq CDH1-TRHDE CDH1 chr16 68835796 + TRHDE chr12 72771774 + Exonic hg19 PRAD TCGA-VP-A879 3 In-Frame Inter-chr q22.1 Oncogene Tumor suppressor gene q21.1 Seq+ 11142 ChimerSeq FusionScan TCGA_RNA-Seq ZMYND8-GNAI3 ZMYND8 chr20 45976599 - GNAI3 chr1 110116358 + Exonic hg19 PRAD TCGA-2A-A8VO 2 In-Frame Inter-chr q13.12 p13.3 11143 ChimerSeq FusionScan TCGA_RNA-Seq PTEN-LIPJ PTEN chr10 89690846 + LIPJ chr10 90362332 + Exonic hg19 PRAD TCGA-KK-A7B1 2 Out-of-Frame Intra-chr q23.31 Oncogene Tumor suppressor gene q23.31 KB Seq+ 11144 ChimerSeq FusionScan TCGA_RNA-Seq ZFHX3-ALS2CR11 ZFHX3 chr16 72984367 - ALS2CR11 chr2 202436743 - Exonic hg19 PRAD TCGA-HC-7232 2 In-Frame Inter-chr q22.3 Tumor suppressor gene Transcription factor Seq+ 11145 ChimerSeq FusionScan TCGA_RNA-Seq EIF4E2-AGAP1 EIF4E2 chr2 233431924 + AGAP1 chr2 236617822 + Exonic hg19 PRAD TCGA-HC-7232 2 Out-of-Frame Intra-chr q37.1 q37.2 11146 ChimerSeq FusionScan TCGA_RNA-Seq CADM1-SORL1 CADM1 chr11 115374988 - SORL1 chr11 121424645 + Exonic hg19 PRAD TCGA-CH-5739 2 In-Frame Intra-chr q23.3 Tumor suppressor gene q24.1 Seq+ 11147 ChimerSeq FusionScan TCGA_RNA-Seq RNF41-SARNP RNF41 chr12 56615543 - SARNP chr12 56146624 - Exonic hg19 PRAD TCGA-J4-A67S 7 3'UTR-3'UTR Intra-chr q13.3 q13.2 Seq+ 11148 ChimerSeq FusionScan TCGA_RNA-Seq RNF41-SARNP RNF41 chr12 56615686 - SARNP chr12 56146624 - Exonic hg19 PRAD TCGA-J4-A67S 3 5'UTR-3'UTR Intra-chr q13.3 q13.2 Seq+ 11149 ChimerSeq FusionScan TCGA_RNA-Seq CASZ1-PRKD2 CASZ1 chr1 10710748 - PRKD2 chr19 47185005 - Exonic hg19 PRAD TCGA-J4-A67S 2 In-Frame Inter-chr p36.22 Transcription factor q13.32 Seq+ 11150 ChimerSeq FusionScan TCGA_RNA-Seq FAM110B-PREX2 FAM110B chr8 58907365 + PREX2 chr8 69103956 + Exonic hg19 PRAD TCGA-V1-A9OL 5 5'UTR-CDS Intra-chr q12.1 q13.2 Seq+ 11151 ChimerSeq FusionScan TCGA_RNA-Seq HTT-WDR19 HTT chr4 3190820 + WDR19 chr4 39257467 + Exonic hg19 PRAD TCGA-V1-A9OL 3 In-Frame Intra-chr p16.3 p14 Seq+ 11152 ChimerSeq FusionScan TCGA_RNA-Seq NUCB1-BAX NUCB1 chr19 49404188 + BAX chr19 49464066 + Exonic hg19 PRAD TCGA-HC-A76W 7 In-Frame Intra-chr q13.33 q13.33 Tumor suppressor gene 11153 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-ADAM33 TBL1XR1 chr3 176914908 - ADAM33 chr20 3657790 - Exonic hg19 PRAD TCGA-EJ-8469 7 5'UTR-CDS Inter-chr q26.32 p13 Seq+ 11154 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-MRPS6 TMPRSS2 chr21 42845251 - MRPS6 chr21 35497640 + Exonic hg19 PRAD TCGA-EJ-8469 3 Out-of-Frame Intra-chr q22.3 q22.11 Seq+ 11155 ChimerSeq FusionScan TCGA_RNA-Seq DTD1-KIF16B DTD1 chr20 18608877 + KIF16B chr20 16496309 - Exonic hg19 PRAD TCGA-EJ-8469 2 In-Frame Intra-chr p11.23 p12.1 Seq+ 11156 ChimerSeq FusionScan TCGA_RNA-Seq GOLIM4-ZBBX GOLIM4 chr3 167812886 - ZBBX chr3 167000283 - Exonic hg19 PRAD TCGA-EJ-8469 2 In-Frame Intra-chr q26.2 q26.1 Seq+ 11157 ChimerSeq FusionScan TCGA_RNA-Seq KDM6A-ARHGAP6 KDM6A chrX 44918711 + ARHGAP6 chrX 11272827 - Exonic hg19 PRAD TCGA-EJ-8469 2 In-Frame Intra-chr p11.3 Oncogene Tumor suppressor gene p22.2 Seq+ 11158 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-M7-A725 18 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11159 ChimerSeq FusionScan TCGA_RNA-Seq SLC4A4-ARHGAP6 SLC4A4 chr4 72263370 + ARHGAP6 chrX 11272827 - Exonic hg19 PRAD TCGA-M7-A725 6 In-Frame Inter-chr q13.3 p22.2 Seq+ 11160 ChimerSeq FusionScan TCGA_RNA-Seq BBS4-CSNK1G1 BBS4 chr15 73028307 + CSNK1G1 chr15 64472653 - Exonic hg19 PRAD TCGA-M7-A725 3 In-Frame Intra-chr q24.1 q22.31 Seq+ 11161 ChimerSeq FusionScan TCGA_RNA-Seq ZFHX3-ZNF821 ZFHX3 chr16 72923629 - ZNF821 chr16 71898145 - Exonic hg19 PRAD TCGA-M7-A725 2 Out-of-Frame Intra-chr q22.3 Tumor suppressor gene Transcription factor q22.2 Transcription factor Seq+ 11162 ChimerSeq FusionScan TCGA_RNA-Seq C21orf2-UMODL1 C21orf2 chr21 45759000 - UMODL1 chr21 43562205 + Exonic hg19 PRAD TCGA-M7-A725 2 CDS-3'UTR Intra-chr q22.3 q22.3 Seq+ 11163 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649521 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-M7-A71Y 4 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 11164 ChimerSeq FusionScan TCGA_RNA-Seq C4orf29-SLC25A31 C4orf29 chr4 128910976 + SLC25A31 chr4 128694540 + Exonic hg19 PRAD TCGA-J9-A8CL 3 Out-of-Frame Intra-chr q28.1 Seq+ 11165 ChimerSeq FusionScan TCGA_RNA-Seq PIAS1-ZNF609 PIAS1 chr15 68346688 + ZNF609 chr15 64970314 + Exonic hg19 PRAD TCGA-J9-A8CL 2 In-Frame Intra-chr q23 Tumor suppressor gene q22.31 Transcription factor Seq+ 11166 ChimerSeq FusionScan TCGA_RNA-Seq AGAP1-SP140 AGAP1 chr2 236403493 + SP140 chr2 231162135 + Exonic hg19 PRAD TCGA-J9-A8CL 2 Out-of-Frame Intra-chr q37.2 q37.1 Transcription factor Seq+ 11167 ChimerSeq FusionScan TCGA_RNA-Seq ZMYND8-GNAI3 ZMYND8 chr20 45976599 - GNAI3 chr1 110116358 + Exonic hg19 PRAD TCGA-2A-A8VO 2 In-Frame Inter-chr q13.12 p13.3 11168 ChimerSeq FusionScan TCGA_RNA-Seq NFAT5-TCF7L2 NFAT5 chr16 69600277 + TCF7L2 chr10 114900942 + Exonic hg19 PRAD TCGA-HC-7209 4 Out-of-Frame Inter-chr q22.1 Transcription factor q25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 11169 ChimerSeq FusionScan TCGA_RNA-Seq KCNMA1-FARP1 KCNMA1 chr10 79397022 - FARP1 chr13 98865473 + Exonic hg19 PRAD TCGA-HC-7209 3 CDS-5'UTR Inter-chr q22.3 q32.2 Seq+ 11170 ChimerSeq FusionScan TCGA_RNA-Seq RNF144B-PPP3CA RNF144B chr6 18399930 + PPP3CA chr4 102117273 - Exonic hg19 PRAD TCGA-HC-7209 3 Out-of-Frame Inter-chr p22.3 q24 Seq+ 11171 ChimerSeq FusionScan TCGA_RNA-Seq CDKAL1-KIF11 CDKAL1 chr6 20535625 + KIF11 chr10 94366021 + Exonic hg19 PRAD TCGA-HC-7209 2 5'UTR-CDS Inter-chr p22.3 q23.33 11172 ChimerSeq FusionScan TCGA_RNA-Seq AARSD1-CCR7 AARSD1 chr17 41113208 - CCR7 chr17 38715194 - Exonic hg19 PRAD TCGA-HC-7209 2 In-Frame Intra-chr q21.31 q21.2 Seq+ 11173 ChimerSeq FusionScan TCGA_RNA-Seq STX3-MS4A15 STX3 chr11 59523108 + MS4A15 chr11 60535039 + Exonic hg19 PRAD TCGA-HC-7209 2 CDS-5'UTR Intra-chr q12.1 q12.2 Seq+ 11174 ChimerSeq FusionScan TCGA_RNA-Seq EFTUD2-DUSP3 EFTUD2 chr17 42961016 - DUSP3 chr17 41847182 - Exonic hg19 PRAD TCGA-HC-7209 2 Out-of-Frame Intra-chr q21.31 q21.31 Seq+ 11175 ChimerSeq FusionScan TCGA_RNA-Seq COPA-STAC2 COPA chr1 160312920 - STAC2 chr17 37374426 - Exonic hg19 PRAD TCGA-CH-5745 2 Out-of-Frame Inter-chr q23.2 q12 Seq+ 11176 ChimerSeq FusionScan TCGA_RNA-Seq BANK1-GSTCD BANK1 chr4 102965064 + GSTCD chr4 106744110 + Exonic hg19 PRAD TCGA-YL-A8S8 3 In-Frame Intra-chr q24 q24 Seq+ 11177 ChimerSeq FusionScan TCGA_RNA-Seq CDC27-MYL4 CDC27 chr17 45266511 - MYL4 chr17 45286754 + Exonic hg19 PRAD TCGA-HC-7213 4 CDS-5'UTR Intra-chr q21.32 q21.32 Seq+ 11178 ChimerSeq FusionScan TCGA_RNA-Seq ELAC2-COX10 ELAC2 chr17 12919084 - COX10 chr17 14063193 + Exonic hg19 PRAD TCGA-HC-7213 3 In-Frame Intra-chr p12 p12 Seq+ 11179 ChimerSeq FusionScan TCGA_RNA-Seq GALNT2-TAF5L GALNT2 chr1 230391090 + TAF5L chr1 229750232 - Exonic hg19 PRAD TCGA-HC-7213 2 CDS-5'UTR Intra-chr q42.13 q42.13 11180 ChimerSeq FusionScan TCGA_RNA-Seq WDR4-CUX1 WDR4 chr21 44270150 - CUX1 chr7 101559394 + Exonic hg19 PRAD TCGA-HC-7213 2 3'UTR-CDS Inter-chr q22.3 q22.1 Tumor suppressor gene Transcription factor 11181 ChimerSeq FusionScan TCGA_RNA-Seq CDK7-SH3BGR CDK7 chr5 68531280 + SH3BGR chr21 40871748 + Exonic hg19 PRAD TCGA-ZG-A9NI 2 In-Frame Inter-chr CMGC:CDK q22.2 Seq+ 11182 ChimerSeq FusionScan TCGA_RNA-Seq SMARCA2-AMACR SMARCA2 chr9 2015404 + AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-VP-A87B 2 5'UTR-CDS Inter-chr p24.3 Tumor suppressor gene p13.2 11183 ChimerSeq FusionScan TCGA_RNA-Seq LNPEP-PPIP5K2 LNPEP chr5 96322374 + PPIP5K2 chr5 102537222 + Exonic hg19 PRAD TCGA-XK-AAJ3 2 Out-of-Frame Intra-chr q15 q21.1 Seq+ 11184 ChimerSeq FusionScan TCGA_RNA-Seq CYB561-PHB CYB561 chr17 61523605 - PHB chr17 47482566 - Exonic hg19 PRAD TCGA-J9-A52B 2 5'UTR-CDS Intra-chr q23.3 q21.33 Tumor suppressor gene Seq+ 11185 ChimerSeq FusionScan TCGA_RNA-Seq PRCC-C8orf80 PRCC chr1 156738031 + C8orf80 chr8 27913571 - Exonic hg19 PRAD TCGA-HC-7744 3 In-Frame Inter-chr q23.1 11186 ChimerSeq FusionScan TCGA_RNA-Seq TTC21B-SLC38A11 TTC21B chr2 166810194 - SLC38A11 chr2 165802237 - Exonic hg19 PRAD TCGA-HC-7744 3 Out-of-Frame Intra-chr q24.3 q24.3 Seq+ 11187 ChimerSeq FusionScan TCGA_RNA-Seq C8orf44-FAM192A C8orf44 chr8 67579936 + FAM192A chr16 57207781 - Exonic hg19 PRAD TCGA-HC-7744 2 5'UTR-5'UTR Inter-chr q13.1 q13 11188 ChimerSeq FusionScan TCGA_RNA-Seq CDYL2-VEPH1 CDYL2 chr16 80838046 - VEPH1 chr3 157082301 - Exonic hg19 PRAD TCGA-HC-7744 2 Out-of-Frame Inter-chr q23.2 q25.32 Seq+ 11189 ChimerSeq FusionScan TCGA_RNA-Seq NCK1-AMACR NCK1 chr3 136581161 + AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-HC-8213 2 5'UTR-CDS Inter-chr q22.3 p13.2 11190 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-ETV4 CLTC chr17 57744338 + ETV4 chr17 41613847 - Exonic hg19 PRAD TCGA-V1-A9ZR 5 In-Frame Intra-chr q23.1 q21.31 Oncogene Transcription factor Seq+ 11191 ChimerSeq FusionScan TCGA_RNA-Seq SMG1-SNF8 SMG1 chr16 18937271 - SNF8 chr17 47018424 - Exonic hg19 PRAD TCGA-XJ-A9DK 2 Out-of-Frame Inter-chr p12.3 Atypical:PIKK q21.32 Seq+ 11192 ChimerSeq FusionScan TCGA_RNA-Seq KLHL2-GALNTL6 KLHL2 chr4 166141211 + GALNTL6 chr4 173852311 + Exonic hg19 PRAD TCGA-EJ-5498 2 Out-of-Frame Intra-chr q32.3 q34.1 Seq+ 11193 ChimerSeq FusionScan TCGA_RNA-Seq SUFU-KCNH2 SUFU chr10 104309863 + KCNH2 chr7 150672029 - Exonic hg19 PRAD TCGA-G9-A9S4 2 In-Frame Inter-chr q24.32 Oncogene Tumor suppressor gene q36.1 Seq+ 11194 ChimerSeq FusionScan TCGA_RNA-Seq MAPRE1-TM9SF4 MAPRE1 chr20 31427662 + TM9SF4 chr20 30720815 + Exonic hg19 PRAD TCGA-J9-A8CN 6 In-Frame Intra-chr q11.21 q11.21 Seq+ 11195 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41623036 - Exonic hg19 PRAD TCGA-KC-A7FD 14 5'UTR-5'UTR Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11196 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-KC-A7FD 14 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11197 ChimerSeq FusionScan TCGA_RNA-Seq CTNND1-AMACR CTNND1 chr11 57529518 + AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-KC-A7FD 2 5'UTR-CDS Inter-chr q12.1 Tumor suppressor gene p13.2 11198 ChimerSeq FusionScan TCGA_RNA-Seq EIF5A-MRPL39 EIF5A chr17 7214970 + MRPL39 chr21 26969726 - Exonic hg19 PRAD TCGA-KC-A7FD 2 3'UTR-CDS Inter-chr p13.1 q21.3 11199 ChimerSeq FusionScan TCGA_RNA-Seq CPE-AMACR CPE chr4 166300680 + AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-KC-A7FD 2 In-Frame Inter-chr q32.3 p13.2 11200 ChimerSeq FusionScan TCGA_RNA-Seq MRPL39-SLC35G6 MRPL39 chr21 26972110 - SLC35G6 chr17 7385306 + Exonic hg19 PRAD TCGA-KC-A7FD 2 In-Frame Inter-chr q21.3 Seq+ 11201 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41613847 - Exonic hg19 PRAD TCGA-KC-A7FD 2 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11202 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42879876 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-KC-A7FD 2 Out-of-Frame Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11203 ChimerSeq FusionScan TCGA_RNA-Seq ST14-RABEP2 ST14 chr11 130064632 + RABEP2 chr16 28922500 - Exonic hg19 PRAD TCGA-XK-AAJP 2 In-Frame Inter-chr q24.3 p11.2 11204 ChimerSeq FusionScan TCGA_RNA-Seq AP1AR-NDST4 AP1AR chr4 113153330 + NDST4 chr4 115792106 - Exonic hg19 PRAD TCGA-HC-7738 4 Out-of-Frame Intra-chr q25 q26 Tumor suppressor gene Seq+ 11205 ChimerSeq FusionScan TCGA_RNA-Seq PRRC1-SPINK6 PRRC1 chr5 126853468 + SPINK6 chr5 147594467 + Exonic hg19 PRAD TCGA-YL-A8SH 2 5'UTR-CDS Intra-chr q23.2 q32 Seq+ 11206 ChimerSeq FusionScan TCGA_RNA-Seq GPBP1-MTRR GPBP1 chr5 56527148 + MTRR chr5 7889207 + Exonic hg19 PRAD TCGA-EJ-7327 4 In-Frame Intra-chr q11.2 Transcription factor p15.31 Oncogene Seq+ 11207 ChimerSeq FusionScan TCGA_RNA-Seq NEO1-DPP8 NEO1 chr15 73345146 + DPP8 chr15 65766626 - Exonic hg19 PRAD TCGA-EJ-7327 3 In-Frame Intra-chr q24.1 q22.31 11208 ChimerSeq FusionScan TCGA_RNA-Seq RUFY1-TARP RUFY1 chr5 178977880 + TARP chr7 38301819 - Exonic hg19 PRAD TCGA-EJ-7327 2 In-Frame Inter-chr 11209 ChimerSeq FusionScan TCGA_RNA-Seq C17orf62-CCDC159 C17orf62 chr17 80408575 - CCDC159 chr19 11464467 + Exonic hg19 PRAD TCGA-EJ-7327 2 5'UTR-CDS Inter-chr q25.3 p13.2 11210 ChimerSeq FusionScan TCGA_RNA-Seq GPBP1-MTRR GPBP1 chr5 56527148 + MTRR chr5 7870882 + Exonic hg19 PRAD TCGA-EJ-7327 2 Out-of-Frame Intra-chr q11.2 Transcription factor p15.31 Oncogene Seq+ 11211 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-GRHL2 TMPRSS2 chr21 42861433 - GRHL2 chr8 102564942 + Exonic hg19 PRAD TCGA-EJ-7314 7 Out-of-Frame Inter-chr q22.3 q22.3 Transcription factor Seq+ 11212 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-GRHL2 TMPRSS2 chr21 42860320 - GRHL2 chr8 102564942 + Exonic hg19 PRAD TCGA-EJ-7314 4 Out-of-Frame Inter-chr q22.3 q22.3 Transcription factor Seq+ 11213 ChimerSeq FusionScan TCGA_RNA-Seq UBE3A-SNRPN UBE3A chr15 25683635 - SNRPN chr15 25207260 + Exonic hg19 PRAD TCGA-EJ-A65J 2 5'UTR-5'UTR Intra-chr q11.2 q11.2 11214 ChimerSeq FusionScan TCGA_RNA-Seq CAMKK2-KDM2B CAMKK2 chr12 121735341 - KDM2B chr12 121951205 - Exonic hg19 PRAD TCGA-EJ-A65J 2 5'UTR-CDS Intra-chr q24.31 q24.31 Transcription factor Seq+ 11215 ChimerSeq FusionScan TCGA_RNA-Seq LEO1-FBN1 LEO1 chr15 52263884 - FBN1 chr15 48830005 - Exonic hg19 PRAD TCGA-EJ-7783 2 In-Frame Intra-chr q21.2 q21.1 Seq+ 11216 ChimerSeq FusionScan TCGA_RNA-Seq PHF11-SEP15 PHF11 chr13 50070231 + 2019_ 9_ 15_ chr1 87369131 - Exonic hg19 PRAD TCGA-EJ-7783 2 Out-of-Frame Inter-chr q14.2 11217 ChimerSeq FusionScan TCGA_RNA-Seq ATF7IP-TMPRSS2 ATF7IP chr12 14610229 + TMPRSS2 chr21 42861520 - Exonic hg19 PRAD TCGA-EJ-7784 5 In-Frame Inter-chr p13.1 q22.3 Seq+ 11218 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ATF7IP TMPRSS2 chr21 42870045 - ATF7IP chr12 14613428 + Exonic hg19 PRAD TCGA-EJ-7784 3 Out-of-Frame Inter-chr q22.3 p13.1 Seq+ 11219 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ATF7IP TMPRSS2 chr21 42880007 - ATF7IP chr12 14613428 + Exonic hg19 PRAD TCGA-EJ-7784 2 5'UTR-CDS Inter-chr q22.3 p13.1 Seq+ 11220 ChimerSeq FusionScan TCGA_RNA-Seq TP53-CD68 TP53 chr17 7590694 - CD68 chr17 7484028 + Exonic hg19 PRAD TCGA-G9-6329 3 5'UTR-CDS Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.1 Seq+ 11221 ChimerSeq FusionScan TCGA_RNA-Seq TP53-CD68 TP53 chr17 7590694 - CD68 chr17 7483783 + Exonic hg19 PRAD TCGA-G9-6329 3 5'UTR-CDS Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.1 Seq+ 11222 ChimerSeq FusionScan TCGA_RNA-Seq APBA2-SNRPN APBA2 chr15 29288009 + SNRPN chr15 25207260 + Exonic hg19 PRAD TCGA-G9-6329 2 5'UTR-5'UTR Intra-chr q11.2 11223 ChimerSeq FusionScan TCGA_RNA-Seq IL6ST-YTHDC2 IL6ST chr5 55272042 - YTHDC2 chr5 112926737 + Exonic hg19 PRAD TCGA-G9-6329 2 Out-of-Frame Intra-chr q11.2 Oncogene q22.2 11224 ChimerSeq FusionScan TCGA_RNA-Seq MPZL1-DCAF6 MPZL1 chr1 167691479 + DCAF6 chr1 167935866 + Exonic hg19 PRAD TCGA-EJ-A65F 4 Out-of-Frame Intra-chr q24.2 q24.2 Seq+ 11225 ChimerSeq FusionScan TCGA_RNA-Seq MBOAT2-ADI1 MBOAT2 chr2 9143668 - ADI1 chr2 3504764 - Exonic hg19 PRAD TCGA-EJ-7325 4 In-Frame Intra-chr p25.1 Seq+ 11226 ChimerSeq FusionScan TCGA_RNA-Seq CLIP1-MCEE CLIP1 chr12 122907067 - MCEE chr2 71337252 - Exonic hg19 PRAD TCGA-EJ-7325 2 5'UTR-CDS Inter-chr q24.31 p13.3 11227 ChimerSeq FusionScan TCGA_RNA-Seq CXADR-APP CXADR chr21 18885490 + APP chr21 27425664 - Exonic hg19 PRAD TCGA-CH-5792 6 In-Frame Intra-chr q21.1 q21.3 Seq+ 11228 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649521 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-YL-A9WX 3 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 11229 ChimerSeq FusionScan TCGA_RNA-Seq SHQ1-PSMB7 SHQ1 chr3 72897348 - PSMB7 chr9 127146935 - Exonic hg19 PRAD TCGA-ZG-A9LZ 5 Out-of-Frame Inter-chr p13 Tumor suppressor gene q33.3 Seq+ 11230 ChimerSeq FusionScan TCGA_RNA-Seq FLJ43663-DEPDC1B FLJ43663 chr7 130737183 - DEPDC1B chr5 59901683 - Exonic hg19 PRAD TCGA-ZG-A9LZ 4 3'UTR-CDS Inter-chr q12.1 11231 ChimerSeq FusionScan TCGA_RNA-Seq SHQ1-PSMB7 SHQ1 chr3 72897348 - PSMB7 chr9 127167711 - Exonic hg19 PRAD TCGA-ZG-A9LZ 3 In-Frame Inter-chr p13 Tumor suppressor gene q33.3 Seq+ 11232 ChimerSeq FusionScan TCGA_RNA-Seq PTEN-LIPJ PTEN chr10 89712016 + LIPJ chr10 90362332 + Exonic hg19 PRAD TCGA-ZG-A9LZ 3 Out-of-Frame Intra-chr q23.31 Oncogene Tumor suppressor gene q23.31 KB Seq+ 11233 ChimerSeq FusionScan TCGA_RNA-Seq FLJ43663-DEPDC1B FLJ43663 chr7 130792478 - DEPDC1B chr5 59901683 - Exonic hg19 PRAD TCGA-ZG-A9LZ 2 3'UTR-CDS Inter-chr q12.1 11234 ChimerSeq FusionScan TCGA_RNA-Seq ZNF292-EYS ZNF292 chr6 87865477 + EYS chr6 66205886 - Exonic hg19 PRAD TCGA-YL-A8SR 3 CDS-5'UTR Intra-chr q14.3 Tumor suppressor gene Transcription factor q12 Seq+ 11235 ChimerSeq FusionScan TCGA_RNA-Seq RBM47-IDO2 RBM47 chr4 40546438 - IDO2 chr8 39821126 + Exonic hg19 PRAD TCGA-YL-A8SR 2 5'UTR-CDS Inter-chr p14 p11.21 Seq+ 11236 ChimerSeq FusionScan TCGA_RNA-Seq SHOC2-TMEM178 SHOC2 chr10 112679415 + TMEM178 chr2 39931220 + Exonic hg19 PRAD TCGA-HC-8262 3 5'UTR-5'UTR Inter-chr q25.2 11237 ChimerSeq FusionScan TCGA_RNA-Seq KLK2-FGFR2 KLK2 chr19 51376775 + FGFR2 chr10 123310973 - Exonic hg19 PRAD TCGA-V1-A9O5 3 In-Frame Inter-chr q13.33 q26.13 TK:FGFR Oncogene KB Pub Seq+ 11238 ChimerSeq FusionScan TCGA_RNA-Seq FAM110B-PREX2 FAM110B chr8 58907365 + PREX2 chr8 69103956 + Exonic hg19 PRAD TCGA-V1-A9OL 5 5'UTR-CDS Intra-chr q12.1 q13.2 Seq+ 11239 ChimerSeq FusionScan TCGA_RNA-Seq HTT-WDR19 HTT chr4 3190820 + WDR19 chr4 39257467 + Exonic hg19 PRAD TCGA-V1-A9OL 3 In-Frame Intra-chr p16.3 p14 Seq+ 11240 ChimerSeq FusionScan TCGA_RNA-Seq C17orf62-NARF C17orf62 chr17 80408575 - NARF chr17 80445791 + Exonic hg19 PRAD TCGA-EJ-7115 2 5'UTR-CDS Intra-chr q25.3 q25.3 Seq+ 11241 ChimerSeq FusionScan TCGA_RNA-Seq RPL5-HSD17B4 RPL5 chr1 93297674 + HSD17B4 chr5 118842512 + Exonic hg19 PRAD TCGA-EJ-7115 2 Out-of-Frame Inter-chr p22.1 Tumor suppressor gene q23.1 11242 ChimerSeq FusionScan TCGA_RNA-Seq MTA1-GEMIN4 MTA1 chr14 105905076 + GEMIN4 chr17 651272 - Exonic hg19 PRAD TCGA-EJ-7115 2 Out-of-Frame Inter-chr q32.33 p13.3 11243 ChimerSeq FusionScan TCGA_RNA-Seq SLC35C2-B4GALT5 SLC35C2 chr20 44993009 - B4GALT5 chr20 48273239 - Exonic hg19 PRAD TCGA-KK-A8ID 4 5'UTR-CDS Intra-chr q13.12 q13.13 Seq+ 11244 ChimerSeq FusionScan TCGA_RNA-Seq FOXP4-DNAH8 FOXP4 chr6 41514605 + DNAH8 chr6 38950121 + Exonic hg19 PRAD TCGA-KK-A8ID 2 5'UTR-CDS Intra-chr p21.1 Oncogene Transcription factor p21.2 Seq+ 11245 ChimerSeq FusionScan TCGA_RNA-Seq C5orf45-RNF130 C5orf45 chr5 179268906 - RNF130 chr5 179440311 - Exonic hg19 PRAD TCGA-KK-A8ID 2 Out-of-Frame Intra-chr q35.3 Seq+ 11246 ChimerSeq FusionScan TCGA_RNA-Seq SF3A2-AZU1 SF3A2 chr19 2243543 + AZU1 chr19 828229 + Exonic hg19 PRAD TCGA-KK-A8ID 2 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 11247 ChimerSeq FusionScan TCGA_RNA-Seq AFF4-DTWD2 AFF4 chr5 132298950 - DTWD2 chr5 118183913 - Exonic hg19 PRAD TCGA-CH-5744 3 5'UTR-CDS Intra-chr q31.1 q23.1 Seq+ 11248 ChimerSeq FusionScan TCGA_RNA-Seq C1orf135-TRPM8 C1orf135 chr1 26185770 - TRPM8 chr2 234904969 + Exonic hg19 PRAD TCGA-KK-A7AZ 4 Out-of-Frame Inter-chr q37.1 11249 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV5 TMPRSS2 chr21 42861433 - ETV5 chr3 185823731 - Exonic hg19 PRAD TCGA-KK-A7AZ 4 CDS-5'UTR Inter-chr q22.3 q27.2 Oncogene Transcription factor KB Pub Seq+ 11250 ChimerSeq FusionScan TCGA_RNA-Seq SLC4A4-C1orf135 SLC4A4 chr4 72263370 + C1orf135 chr1 26162337 - Exonic hg19 PRAD TCGA-KK-A7AZ 2 Out-of-Frame Inter-chr q13.3 Seq+ 11251 ChimerSeq FusionScan TCGA_RNA-Seq MGC23284-BANP MGC23284 chr16 88729808 + BANP chr16 88052033 + Exonic hg19 PRAD TCGA-G9-6377 2 5'UTR-CDS Intra-chr q24.2 Tumor suppressor gene 11252 ChimerSeq FusionScan TCGA_RNA-Seq C11orf49-CD5 C11orf49 chr11 47074069 + CD5 chr11 60882527 + Exonic hg19 PRAD TCGA-G9-6377 2 In-Frame Intra-chr p11.2 q12.2 Seq+ 11253 ChimerSeq FusionScan TCGA_RNA-Seq VGLL4-AMACR VGLL4 chr3 11684910 - AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-G9-6377 2 In-Frame Inter-chr p25.2 p13.2 11254 ChimerSeq FusionScan TCGA_RNA-Seq MAPRE3-NRBP1 MAPRE3 chr2 27193670 + NRBP1 chr2 27662632 + Exonic hg19 PRAD TCGA-G9-6377 2 5'UTR-CDS Intra-chr p23.3 p23.3 Other:NRBP Tumor suppressor gene 11255 ChimerSeq FusionScan TCGA_RNA-Seq CASP7-LRRC27 CASP7 chr10 115439737 + LRRC27 chr10 134165110 + Exonic hg19 PRAD TCGA-TP-A8TT 3 5'UTR-5'UTR Intra-chr q25.3 q26.3 Seq+ 11256 ChimerSeq FusionScan TCGA_RNA-Seq SMG1-SNF8 SMG1 chr16 18937271 - SNF8 chr17 47018424 - Exonic hg19 PRAD TCGA-XJ-A9DK 2 Out-of-Frame Inter-chr p12.3 Atypical:PIKK q21.32 Seq+ 11257 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-INPP4B TMPRSS2 chr21 42880007 - INPP4B chr4 143191927 - Exonic hg19 PRAD TCGA-V1-A8WS 8 5'UTR-CDS Inter-chr q22.3 q31.21 Tumor suppressor gene Seq+ 11258 ChimerSeq FusionScan TCGA_RNA-Seq CHTF8-TBC1D22A CHTF8 chr16 69165991 - TBC1D22A chr22 47569140 + Exonic hg19 PRAD TCGA-V1-A8WS 7 5'UTR-CDS Inter-chr q22.1 q13.31 Seq+ 11259 ChimerSeq FusionScan TCGA_RNA-Seq HERC2-TMEM145 HERC2 chr15 28544547 - TMEM145 chr19 42818423 + Exonic hg19 PRAD TCGA-V1-A8WS 3 Out-of-Frame Inter-chr q13.2 Seq+ 11260 ChimerSeq FusionScan TCGA_RNA-Seq ERG-TMPRSS2 ERG chr21 39947585 - TMPRSS2 chr21 42852529 - Exonic hg19 PRAD TCGA-V1-A8WS 2 Out-of-Frame Intra-chr q22.2 Oncogene Transcription factor q22.3 Seq+ 11261 ChimerSeq FusionScan TCGA_RNA-Seq ECI1-CDKN3 ECI1 chr16 2301316 - CDKN3 chr14 54868241 + Exonic hg19 PRAD TCGA-V1-A8WS 2 Out-of-Frame Inter-chr p13.3 q22.2 Seq+ 11262 ChimerSeq FusionScan TCGA_RNA-Seq BCL2L13-GAB4 BCL2L13 chr22 18138598 + GAB4 chr22 17446158 - Exonic hg19 PRAD TCGA-HI-7168 4 In-Frame Intra-chr q11.21 q11.1 Seq+ 11263 ChimerSeq FusionScan TCGA_RNA-Seq MYEF2-DSTN MYEF2 chr15 48458129 - DSTN chr20 17581382 + Exonic hg19 PRAD TCGA-HI-7168 2 In-Frame Inter-chr q21.1 p12.1 11264 ChimerSeq FusionScan TCGA_RNA-Seq CAPZA2-TES CAPZA2 chr7 116502704 + TES chr7 115874587 + Exonic hg19 PRAD TCGA-HI-7168 2 In-Frame Intra-chr q31.2 q31.2 Tumor suppressor gene Seq+ 11265 ChimerSeq FusionScan TCGA_RNA-Seq EXD3-PPP1R12C EXD3 chr9 140317565 - PPP1R12C chr19 55607703 - Exonic hg19 PRAD TCGA-HI-7168 2 5'UTR-CDS Inter-chr q34.3 q13.42 11266 ChimerSeq FusionScan TCGA_RNA-Seq PDXDC1-SNF8 PDXDC1 chr16 15123913 + SNF8 chr17 47014486 - Exonic hg19 PRAD TCGA-J4-A67R 2 In-Frame Inter-chr p13.11 q21.32 11267 ChimerSeq FusionScan TCGA_RNA-Seq VAV2-COL27A1 VAV2 chr9 136804224 - COL27A1 chr9 117047003 + Exonic hg19 PRAD TCGA-XQ-A8TA 6 In-Frame Intra-chr q34.2 q32 Seq+ 11268 ChimerSeq FusionScan TCGA_RNA-Seq CDC14B-AUH CDC14B chr9 99381500 - AUH chr9 94060358 - Exonic hg19 PRAD TCGA-XQ-A8TA 5 In-Frame Intra-chr q22.33 q22.31 Seq+ 11269 ChimerSeq FusionScan TCGA_RNA-Seq TMEM8A-CSDA TMEM8A chr16 431700 - CSDA chr12 10856747 - Exonic hg19 PRAD TCGA-XQ-A8TA 3 Out-of-Frame Inter-chr p13.3 Seq+ 11270 ChimerSeq FusionScan TCGA_RNA-Seq RGS3-ABCA1 RGS3 chr9 116226161 + ABCA1 chr9 107602800 - Exonic hg19 PRAD TCGA-XQ-A8TA 2 Out-of-Frame Intra-chr q32 q31.1 Seq+ 11271 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 PRAD TCGA-XQ-A8TA 2 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 11272 ChimerSeq FusionScan TCGA_RNA-Seq CSDA-TMEM8A CSDA chr12 10862506 - TMEM8A chr16 427848 - Exonic hg19 PRAD TCGA-XQ-A8TA 2 Out-of-Frame Inter-chr p13.3 Seq+ 11273 ChimerSeq FusionScan TCGA_RNA-Seq PTPRG-FHIT PTPRG chr3 61734656 + FHIT chr3 60522712 - Exonic hg19 PRAD TCGA-XQ-A8TA 2 CDS-5'UTR Intra-chr p14.2 p14.2 Tumor suppressor gene Seq+ 11274 ChimerSeq FusionScan TCGA_RNA-Seq CXADR-APP CXADR chr21 18885490 + APP chr21 27425664 - Exonic hg19 PRAD TCGA-CH-5792 6 In-Frame Intra-chr q21.1 q21.3 Seq+ 11275 ChimerSeq FusionScan TCGA_RNA-Seq PSD3-NEFL PSD3 chr8 18871072 - NEFL chr8 24811819 - Exonic hg19 PRAD TCGA-MG-AAMC 3 In-Frame Intra-chr p22 p21.2 Seq+ 11276 ChimerSeq FusionScan TCGA_RNA-Seq RBM5-CYB561D2 RBM5 chr3 50143142 + CYB561D2 chr3 50390671 + Exonic hg19 PRAD TCGA-MG-AAMC 2 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene Seq+ 11277 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ZBTB7B SLC45A3 chr1 205649521 - ZBTB7B chr1 154987130 + Exonic hg19 PRAD TCGA-FC-A5OB 12 5'UTR-5'UTR Intra-chr q32.1 q21.3 Transcription factor Seq+ 11278 ChimerSeq FusionScan TCGA_RNA-Seq SGMS1-CYP2C8 SGMS1 chr10 52193235 - CYP2C8 chr10 96827448 - Exonic hg19 PRAD TCGA-FC-A5OB 2 5'UTR-5'UTR Intra-chr q11.23 Tumor suppressor gene q23.33 11279 ChimerSeq FusionScan TCGA_RNA-Seq MBOAT2-ADI1 MBOAT2 chr2 9143668 - ADI1 chr2 3504764 - Exonic hg19 PRAD TCGA-EJ-7325 4 In-Frame Intra-chr p25.1 Seq+ 11280 ChimerSeq FusionScan TCGA_RNA-Seq CLIP1-MCEE CLIP1 chr12 122907067 - MCEE chr2 71337252 - Exonic hg19 PRAD TCGA-EJ-7325 2 5'UTR-CDS Inter-chr q24.31 p13.3 11281 ChimerSeq FusionScan TCGA_RNA-Seq VPS29-SVOP VPS29 chr12 110939853 - SVOP chr12 109306517 - Exonic hg19 PRAD TCGA-HC-A632 2 In-Frame Intra-chr q24.11 q24.11 Seq+ 11282 ChimerSeq FusionScan TCGA_RNA-Seq DTX2-POR DTX2 chr7 76091153 + POR chr7 75583306 + Exonic hg19 PRAD TCGA-ZG-A9KY 2 5'UTR-5'UTR Intra-chr q11.23 Seq+ 11283 ChimerSeq FusionScan TCGA_RNA-Seq BMPR1A-ENTPD1 BMPR1A chr10 88659883 + ENTPD1 chr10 97604232 + Exonic hg19 PRAD TCGA-HC-7231 8 In-Frame Intra-chr q23.2 TKL:STKR Oncogene Tumor suppressor gene q24.1 Seq+ 11284 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-EPB41L4B SLC45A3 chr1 205630988 - EPB41L4B chr9 112042201 - Exonic hg19 PRAD TCGA-HC-7211 2 In-Frame Inter-chr q32.1 q31.3 Seq+ 11285 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB20-CLDN11 ZBTB20 chr3 114069120 - CLDN11 chr3 170140950 + Exonic hg19 PRAD TCGA-HC-7211 2 In-Frame Intra-chr q13.31 Transcription factor q26.2 Seq+ 11286 ChimerSeq FusionScan TCGA_RNA-Seq EPN2-SLC5A10 EPN2 chr17 19140844 + SLC5A10 chr17 18916722 + Exonic hg19 PRAD TCGA-KK-A5A1 2 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 11287 ChimerSeq FusionScan TCGA_RNA-Seq MYRIP-MLH1 MYRIP chr3 39942417 + MLH1 chr3 37090394 + Exonic hg19 PRAD TCGA-KK-A5A1 2 Out-of-Frame Intra-chr p22.1 p22.2 Oncogene Tumor suppressor gene Seq+ 11288 ChimerSeq FusionScan TCGA_RNA-Seq DCUN1D1-SLC22A1 DCUN1D1 chr3 182698274 - SLC22A1 chr6 160575829 + Exonic hg19 PRAD TCGA-HC-A76X 3 Out-of-Frame Inter-chr q26.33 Oncogene q25.3 Seq+ 11289 ChimerSeq FusionScan TCGA_RNA-Seq DCUN1D1-SLC22A1 DCUN1D1 chr3 182698274 - SLC22A1 chr6 160579547 + Exonic hg19 PRAD TCGA-HC-A76X 2 In-Frame Inter-chr q26.33 Oncogene q25.3 Seq+ 11290 ChimerSeq FusionScan TCGA_RNA-Seq CADM1-SORL1 CADM1 chr11 115374988 - SORL1 chr11 121424645 + Exonic hg19 PRAD TCGA-CH-5739 2 In-Frame Intra-chr q23.3 Tumor suppressor gene q24.1 Seq+ 11291 ChimerSeq FusionScan TCGA_RNA-Seq PSD3-NEFL PSD3 chr8 18871072 - NEFL chr8 24811819 - Exonic hg19 PRAD TCGA-MG-AAMC 3 In-Frame Intra-chr p22 p21.2 Seq+ 11292 ChimerSeq FusionScan TCGA_RNA-Seq RBM5-CYB561D2 RBM5 chr3 50143142 + CYB561D2 chr3 50390671 + Exonic hg19 PRAD TCGA-MG-AAMC 2 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene Seq+ 11293 ChimerSeq FusionScan TCGA_RNA-Seq CASP7-LRRC27 CASP7 chr10 115439737 + LRRC27 chr10 134165110 + Exonic hg19 PRAD TCGA-TP-A8TT 3 5'UTR-5'UTR Intra-chr q25.3 q26.3 Seq+ 11294 ChimerSeq FusionScan TCGA_RNA-Seq VIPR2-SCTR VIPR2 chr7 158826903 - SCTR chr2 120199175 - Exonic hg19 PRAD TCGA-G9-6333 2 Out-of-Frame Inter-chr q36.3 q14.2 11295 ChimerSeq FusionScan TCGA_RNA-Seq ITCH-PIGU ITCH chr20 33028149 + PIGU chr20 33148783 - Exonic hg19 PRAD TCGA-HC-7752 3 Out-of-Frame Intra-chr q11.22 q11.22 Seq+ 11296 ChimerSeq FusionScan TCGA_RNA-Seq UPF3B-TRPM4 UPF3B chrX 118979160 - TRPM4 chr19 49705220 + Exonic hg19 PRAD TCGA-CH-5767 2 In-Frame Inter-chr q24 q13.33 11297 ChimerSeq FusionScan TCGA_RNA-Seq AZIN1-ZFPM2 AZIN1 chr8 103862226 - ZFPM2 chr8 106456507 + Exonic hg19 PRAD TCGA-CH-5767 2 5'UTR-CDS Intra-chr q22.3 q22.3 Transcription factor Seq+ 11298 ChimerSeq FusionScan TCGA_RNA-Seq NCOR1-CCDC144C NCOR1 chr17 15964714 - CCDC144C chr17 20294787 + Exonic hg19 PRAD TCGA-VP-A876 3 CDS-5'UTR Intra-chr p11.2 Oncogene 11299 ChimerSeq FusionScan TCGA_RNA-Seq NCOR1-CCDC144A NCOR1 chr17 15964714 - CCDC144A chr17 16664738 + Exonic hg19 PRAD TCGA-VP-A876 3 Out-of-Frame Intra-chr p11.2 Oncogene p11.2 Seq+ 11300 ChimerSeq FusionScan TCGA_RNA-Seq LRP3-LSM14A LRP3 chr19 33685764 + LSM14A chr19 34685382 + Exonic hg19 PRAD TCGA-J4-A83I 2 In-Frame Intra-chr q13.11 Seq+ 11301 ChimerSeq FusionScan TCGA_RNA-Seq SLC38A10-SPTAN1 SLC38A10 chr17 79244717 - SPTAN1 chr9 131329016 + Exonic hg19 PRAD TCGA-ZG-A9LN 2 CDS-5'UTR Inter-chr q25.3 q34.11 11302 ChimerSeq FusionScan TCGA_RNA-Seq EYA2-PI3 EYA2 chr20 45523626 + PI3 chr20 43804501 + Exonic hg19 PRAD TCGA-ZG-A9LN 2 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 11303 ChimerSeq FusionScan TCGA_RNA-Seq C12orf29-IRAK4 C12orf29 chr12 88429515 + IRAK4 chr12 44161905 + Exonic hg19 PRAD TCGA-KK-A8I8 2 CDS-5'UTR Intra-chr q21.32 q12 TKL:IRAK Seq+ 11304 ChimerSeq FusionScan TCGA_RNA-Seq SNX13-TSPAN13 SNX13 chr7 17979906 - TSPAN13 chr7 16815835 + Exonic hg19 PRAD TCGA-HC-7819 2 In-Frame Intra-chr p21.1 p21.1 Tumor suppressor gene 11305 ChimerSeq FusionScan TCGA_RNA-Seq NEK7-RPS6KC1 NEK7 chr1 198201767 + RPS6KC1 chr1 213251037 + Exonic hg19 PRAD TCGA-HC-7817 2 In-Frame Intra-chr q31.3 Other:NEK q32.3 11306 ChimerSeq FusionScan TCGA_RNA-Seq C5AR1-HSD17B14 C5AR1 chr19 47813155 + HSD17B14 chr19 49318398 - Exonic hg19 PRAD TCGA-KK-A6E7 2 In-Frame Intra-chr q13.32 q13.33 11307 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649521 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-KK-A8I5 4 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 11308 ChimerSeq FusionScan TCGA_RNA-Seq RAF1-GXYLT2 RAF1 chr3 12705311 - GXYLT2 chr3 72957517 + Exonic hg19 PRAD TCGA-EJ-5497 2 5'UTR-CDS Intra-chr p25.2 TKL:RAF Oncogene p13 Seq+ 11309 ChimerSeq FusionScan TCGA_RNA-Seq TMEM39A-EPHA6 TMEM39A chr3 119171293 - EPHA6 chr3 96706173 + Exonic hg19 PRAD TCGA-EJ-5505 2 In-Frame Intra-chr q13.33 q11.2 Seq+ 11310 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649521 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-HC-A6AN 7 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 11311 ChimerSeq FusionScan TCGA_RNA-Seq IPPK-CDC26 IPPK chr9 95396667 - CDC26 chr9 116029719 - Exonic hg19 PRAD TCGA-HC-A6AN 2 In-Frame Intra-chr q22.31 q32 11312 ChimerSeq FusionScan TCGA_RNA-Seq COBLL1-CYP27A1 COBLL1 chr2 165600196 - CYP27A1 chr2 219674299 + Exonic hg19 PRAD TCGA-CH-5761 2 Out-of-Frame Intra-chr q24.3 q35 11313 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-IRS2 TMPRSS2 chr21 42860320 - IRS2 chr13 110408655 - Exonic hg19 PRAD TCGA-HI-7171 7 In-Frame Inter-chr q22.3 q34 Oncogene Seq+ 11314 ChimerSeq FusionScan TCGA_RNA-Seq CUX2-ANAPC11 CUX2 chr12 111472044 + ANAPC11 chr17 79852342 + Exonic hg19 PRAD TCGA-HI-7171 3 CDS-5'UTR Inter-chr q24.11 Transcription factor q25.3 Seq+ 11315 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-IRS2 TMPRSS2 chr21 42861433 - IRS2 chr13 110408655 - Exonic hg19 PRAD TCGA-HI-7171 2 In-Frame Inter-chr q22.3 q34 Oncogene Seq+ 11316 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 PRAD TCGA-HI-7171 2 Out-of-Frame Intra-chr q22.2 q22.2 11317 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPL-PTMA HNRNPL chr19 39342935 - PTMA chr2 232576057 + Exonic hg19 PRAD TCGA-HI-7171 2 5'UTR-CDS Inter-chr q37.1 11318 ChimerSeq FusionScan TCGA_RNA-Seq NEK7-RPS6KC1 NEK7 chr1 198201767 + RPS6KC1 chr1 213251037 + Exonic hg19 PRAD TCGA-HC-7817 2 In-Frame Intra-chr q31.3 Other:NEK q32.3 11319 ChimerSeq FusionScan TCGA_RNA-Seq TP53-KIAA0753 TP53 chr17 7590694 - KIAA0753 chr17 6498373 - Exonic hg19 PRAD TCGA-EJ-5525 3 5'UTR-CDS Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.1 Seq+ 11320 ChimerSeq FusionScan TCGA_RNA-Seq TFDP2-XRN1 TFDP2 chr3 141820576 - XRN1 chr3 142084208 - Exonic hg19 PRAD TCGA-EJ-5525 2 In-Frame Intra-chr q23 Transcription factor q23 Seq+ 11321 ChimerSeq FusionScan TCGA_RNA-Seq DOPEY2-ELF2 DOPEY2 chr21 37572799 + ELF2 chr4 139983211 - Exonic hg19 PRAD TCGA-EJ-5525 2 Out-of-Frame Inter-chr q22.12 q31.1 Transcription factor Seq+ 11322 ChimerSeq FusionScan TCGA_RNA-Seq ETV6-PDE6H ETV6 chr12 11803094 + PDE6H chr12 15130905 + Exonic hg19 PRAD TCGA-J4-AATZ 6 CDS-5'UTR Intra-chr p13.2 Tumor suppressor gene Transcription factor p12.3 Seq+ 11323 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB20-LSAMP ZBTB20 chr3 114693212 - LSAMP chr3 115738487 - Exonic hg19 PRAD TCGA-J4-AATZ 3 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.31 Tumor suppressor gene Seq+ 11324 ChimerSeq FusionScan TCGA_RNA-Seq PHF2-AGK PHF2 chr9 96339153 + AGK chr7 141349062 + Exonic hg19 PRAD TCGA-J4-AATZ 2 Out-of-Frame Inter-chr q22.31 11325 ChimerSeq FusionScan TCGA_RNA-Seq SMAD9-CCNA1 SMAD9 chr13 37427555 - CCNA1 chr13 37007172 + Exonic hg19 PRAD TCGA-J4-AATZ 2 In-Frame Intra-chr q13.3 Transcription factor q13.3 Seq+ 11326 ChimerSeq FusionScan TCGA_RNA-Seq SMAD9-CCNA1 SMAD9 chr13 37427555 - CCNA1 chr13 37007169 + Exonic hg19 PRAD TCGA-J4-AATZ 2 In-Frame Intra-chr q13.3 Transcription factor q13.3 Seq+ 11327 ChimerSeq FusionScan TCGA_RNA-Seq PDIA4-HACE1 PDIA4 chr7 148725412 - HACE1 chr6 105232360 - Exonic hg19 PRAD TCGA-KK-A6E6 2 Out-of-Frame Inter-chr q36.1 q16.3 Tumor suppressor gene Seq+ 11328 ChimerSeq FusionScan TCGA_RNA-Seq CDH1-TRHDE CDH1 chr16 68835796 + TRHDE chr12 72771774 + Exonic hg19 PRAD TCGA-VP-A879 3 In-Frame Inter-chr q22.1 Oncogene Tumor suppressor gene q21.1 Seq+ 11329 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-BRAF TMPRSS2 chr21 42866282 - BRAF chr7 140481493 - Exonic hg19 PRAD TCGA-FC-A6HD 3 Out-of-Frame Inter-chr q22.3 q34 TKL:RAF Oncogene Seq+ 11330 ChimerSeq FusionScan TCGA_RNA-Seq ACPP-MYC ACPP chr3 132051188 + MYC chr8 128750493 + Exonic hg19 PRAD TCGA-G9-6366 8 In-Frame Inter-chr q22.1 q24.21 Oncogene Transcription factor Seq+ 11331 ChimerSeq FusionScan TCGA_RNA-Seq ZNF626-MPHOSPH8 ZNF626 chr19 20844249 - MPHOSPH8 chr13 20245345 + Exonic hg19 PRAD TCGA-G9-6366 2 In-Frame Inter-chr p12 Transcription factor q12.11 11332 ChimerSeq FusionScan TCGA_RNA-Seq TMEM68-ZNF821 TMEM68 chr8 56685827 - ZNF821 chr16 71913926 - Exonic hg19 PRAD TCGA-KK-A8IM 2 5'UTR-5'UTR Inter-chr q12.1 q22.2 Transcription factor Seq+ 11333 ChimerSeq FusionScan TCGA_RNA-Seq NEDD4L-MORC3 NEDD4L chr18 55833093 + MORC3 chr21 37728917 + Exonic hg19 PRAD TCGA-KK-A8IL 2 In-Frame Inter-chr q21.31 Tumor suppressor gene q22.12 Seq+ 11334 ChimerSeq FusionScan TCGA_RNA-Seq ACSL3-LINC00592 ACSL3 chr2 223797998 + LINC00592 chr12 52617229 + Exonic hg19 PRAD TCGA-J9-A8CK 3 CDS-5'UTR Inter-chr q36.1 q13.13 Seq+ 11335 ChimerSeq FusionScan TCGA_RNA-Seq OPN3-SLC39A11 OPN3 chr1 241803183 - SLC39A11 chr17 70944014 - Exonic hg19 PRAD TCGA-KC-A7F5 2 Out-of-Frame Inter-chr q43 q25.1 Seq+ 11336 ChimerSeq FusionScan TCGA_RNA-Seq TIA1-ACTR2 TIA1 chr2 70463210 - ACTR2 chr2 65478160 + Exonic hg19 PRAD TCGA-KK-A7AP 5 In-Frame Intra-chr p13.3 p14 TKL:STKR Seq+ 11337 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649521 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-KK-A7AP 5 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 11338 ChimerSeq FusionScan TCGA_RNA-Seq PHF21B-AMACR PHF21B chr22 45404425 - AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-KK-A7AP 2 Out-of-Frame Inter-chr q13.31 p13.2 11339 ChimerSeq FusionScan TCGA_RNA-Seq NEDD4L-ZC3H7A NEDD4L chr18 55919286 + ZC3H7A chr16 11876244 - Exonic hg19 PRAD TCGA-EJ-8470 2 5'UTR-5'UTR Inter-chr q21.31 Tumor suppressor gene p13.13 Seq+ 11340 ChimerSeq FusionScan TCGA_RNA-Seq NEDD4L-BCAR4 NEDD4L chr18 55919286 + BCAR4 chr16 11922248 - Exonic hg19 PRAD TCGA-EJ-8470 2 CDS-3'UTR Inter-chr q21.31 Tumor suppressor gene p13.13 Seq+ 11341 ChimerSeq FusionScan TCGA_RNA-Seq ITCH-PIGU ITCH chr20 33028149 + PIGU chr20 33148783 - Exonic hg19 PRAD TCGA-HC-7752 3 Out-of-Frame Intra-chr q11.22 q11.22 Seq+ 11342 ChimerSeq FusionScan TCGA_RNA-Seq FIP1L1-SLC38A8 FIP1L1 chr4 54306775 + SLC38A8 chr16 84046657 - Exonic hg19 PRAD TCGA-EJ-A65B 5 In-Frame Inter-chr q12 q23.3 Seq+ 11343 ChimerSeq FusionScan TCGA_RNA-Seq VPS29-SVOP VPS29 chr12 110939853 - SVOP chr12 109306517 - Exonic hg19 PRAD TCGA-HC-A632 4 In-Frame Intra-chr q24.11 q24.11 Seq+ 11344 ChimerSeq FusionScan TCGA_RNA-Seq ZNF644-ORC4 ZNF644 chr1 91447866 - ORC4 chr2 148716435 - Exonic hg19 PRAD TCGA-HC-A632 2 Out-of-Frame Inter-chr p22.2 Transcription factor q23.1 11345 ChimerSeq FusionScan TCGA_RNA-Seq TCF3-MEX3D TCF3 chr19 1615283 - MEX3D chr19 1556922 - Exonic hg19 PRAD TCGA-CH-5751 3 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p13.3 11346 ChimerSeq FusionScan TCGA_RNA-Seq ACSL3-SGPP2 ACSL3 chr2 223725976 + SGPP2 chr2 223386485 + Exonic hg19 PRAD TCGA-CH-5751 3 5'UTR-CDS Intra-chr q36.1 q36.1 Seq+ 11347 ChimerSeq FusionScan TCGA_RNA-Seq RPL23-BRD2 RPL23 chr17 37008856 - BRD2 chr6 32939371 + Exonic hg19 PRAD TCGA-CH-5751 2 CDS-3'UTR Inter-chr q12 Atypical:BRD Seq+ 11348 ChimerSeq FusionScan TCGA_RNA-Seq TRIM33-CSDE1 TRIM33 chr1 114945381 - CSDE1 chr1 115282511 - Exonic hg19 PRAD TCGA-CH-5751 2 In-Frame Intra-chr p13.2 Oncogene p13.2 Seq+ 11349 ChimerSeq FusionScan TCGA_RNA-Seq CPD-PIGW CPD chr17 28706744 + PIGW chr17 34892942 + Exonic hg19 PRAD TCGA-CH-5740 2 CDS-5'UTR Intra-chr q11.2 Tumor suppressor gene q12 Seq+ 11350 ChimerSeq FusionScan TCGA_RNA-Seq THRAP3-RPN1 THRAP3 chr1 36690106 + RPN1 chr3 128363826 - Exonic hg19 PRAD TCGA-CH-5740 2 5'UTR-CDS Inter-chr p34.3 q21.3 Seq+ 11351 ChimerSeq FusionScan TCGA_RNA-Seq UHRF1BP1-RIOK1 UHRF1BP1 chr6 34825694 + RIOK1 chr6 7417563 + Exonic hg19 PRAD TCGA-CH-5740 2 In-Frame Intra-chr p21.31 p24.3 Atypical:RIO Seq+ 11352 ChimerSeq FusionScan TCGA_RNA-Seq DHX9-PRELID1 DHX9 chr1 182850782 + PRELID1 chr5 176733422 + Exonic hg19 PRAD TCGA-TK-A8OK 4 In-Frame Inter-chr q25.3 q35.3 Seq+ 11353 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ZBTB7B SLC45A3 chr1 205649521 - ZBTB7B chr1 154987130 + Exonic hg19 PRAD TCGA-FC-A5OB 12 5'UTR-5'UTR Intra-chr q32.1 q21.3 Transcription factor Seq+ 11354 ChimerSeq FusionScan TCGA_RNA-Seq SGMS1-CYP2C8 SGMS1 chr10 52193235 - CYP2C8 chr10 96827448 - Exonic hg19 PRAD TCGA-FC-A5OB 2 5'UTR-5'UTR Intra-chr q11.23 Tumor suppressor gene q23.33 11355 ChimerSeq FusionScan TCGA_RNA-Seq EXTL2-RPS6KC1 EXTL2 chr1 101360188 - RPS6KC1 chr1 213415911 + Exonic hg19 PRAD TCGA-EJ-7123 2 5'UTR-CDS Intra-chr p21.2 Tumor suppressor gene q32.3 11356 ChimerSeq FusionScan TCGA_RNA-Seq TP53-CD68 TP53 chr17 7590694 - CD68 chr17 7483783 + Exonic hg19 PRAD TCGA-G9-6329 3 5'UTR-CDS Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.1 Seq+ 11357 ChimerSeq FusionScan TCGA_RNA-Seq TP53-CD68 TP53 chr17 7590694 - CD68 chr17 7484028 + Exonic hg19 PRAD TCGA-G9-6329 3 5'UTR-CDS Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.1 Seq+ 11358 ChimerSeq FusionScan TCGA_RNA-Seq APBA2-SNRPN APBA2 chr15 29288009 + SNRPN chr15 25207260 + Exonic hg19 PRAD TCGA-G9-6329 2 5'UTR-5'UTR Intra-chr q11.2 11359 ChimerSeq FusionScan TCGA_RNA-Seq IL6ST-YTHDC2 IL6ST chr5 55272042 - YTHDC2 chr5 112926737 + Exonic hg19 PRAD TCGA-G9-6329 2 Out-of-Frame Intra-chr q11.2 Oncogene q22.2 11360 ChimerSeq FusionScan TCGA_RNA-Seq C12orf29-IRAK4 C12orf29 chr12 88429515 + IRAK4 chr12 44161905 + Exonic hg19 PRAD TCGA-KK-A8I8 2 CDS-5'UTR Intra-chr q21.32 q12 TKL:IRAK Seq+ 11361 ChimerSeq FusionScan TCGA_RNA-Seq BANK1-C4orf22 BANK1 chr4 102839346 + C4orf22 chr4 81884670 + Exonic hg19 PRAD TCGA-XK-AAJT 3 In-Frame Intra-chr q24 q21.21 Seq+ 11362 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649521 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-XJ-A9DQ 3 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 11363 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R12A-IMMT PPP1R12A chr12 80328474 - IMMT chr2 86408495 - Exonic hg19 PRAD TCGA-VN-A88P 2 In-Frame Inter-chr q21.31 p11.2 Seq+ 11364 ChimerSeq FusionScan TCGA_RNA-Seq EIF2AK4-BUB1B EIF2AK4 chr15 40309443 + BUB1B chr15 40504699 + Exonic hg19 PRAD TCGA-CH-5771 3 In-Frame Intra-chr q15.1 q15.1 Oncogene Seq+ 11365 ChimerSeq FusionScan TCGA_RNA-Seq OSBPL9-SERINC5 OSBPL9 chr1 52082893 + SERINC5 chr5 79454785 - Exonic hg19 PRAD TCGA-CH-5771 2 Out-of-Frame Inter-chr p32.3 q14.1 Seq+ 11366 ChimerSeq FusionScan TCGA_RNA-Seq SERINC5-CDYL2 SERINC5 chr5 79551714 - CDYL2 chr16 80719026 - Exonic hg19 PRAD TCGA-CH-5771 2 In-Frame Inter-chr q14.1 q23.2 Seq+ 11367 ChimerSeq FusionScan TCGA_RNA-Seq TSC22D1-NUFIP1 TSC22D1 chr13 45147298 - NUFIP1 chr13 45540071 - Exonic hg19 PRAD TCGA-KK-A6E2 2 In-Frame Intra-chr q14.11 Tumor suppressor gene Transcription factor q14.12 Seq+ 11368 ChimerSeq FusionScan TCGA_RNA-Seq CCDC57-NPY CCDC57 chr17 80170660 - NPY chr7 24331281 + Exonic hg19 PRAD TCGA-G9-6338 3 5'UTR-CDS Inter-chr q25.3 p15.3 11369 ChimerSeq FusionScan TCGA_RNA-Seq BEND7-FRMD4A BEND7 chr10 13541738 - FRMD4A chr10 13900912 - Exonic hg19 PRAD TCGA-V1-A8WV 2 Out-of-Frame Intra-chr p13 p13 Seq+ 11370 ChimerSeq FusionScan TCGA_RNA-Seq ACPP-ATP2C1 ACPP chr3 132036420 + ATP2C1 chr3 130649259 + Exonic hg19 PRAD TCGA-V1-A9O9 6 In-Frame Intra-chr q22.1 q22.1 Seq+ 11371 ChimerSeq FusionScan TCGA_RNA-Seq SLC30A4-VPS53 SLC30A4 chr15 45814161 - VPS53 chr17 565135 - Exonic hg19 PRAD TCGA-V1-A9O9 3 Out-of-Frame Inter-chr q21.1 Tumor suppressor gene Seq+ 11372 ChimerSeq FusionScan TCGA_RNA-Seq PLDN-SCMH1 PLDN chr15 45884474 + SCMH1 chr1 41514562 - Exonic hg19 PRAD TCGA-V1-A9O9 2 Out-of-Frame Inter-chr p34.2 Transcription factor Seq+ 11373 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-CH-5763 7 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11374 ChimerSeq FusionScan TCGA_RNA-Seq ACTG2-REG3G ACTG2 chr2 74120178 + REG3G chr2 79253208 + Exonic hg19 PRAD TCGA-CH-5763 2 5'UTR-5'UTR Intra-chr p13.1 p12 11375 ChimerSeq FusionScan TCGA_RNA-Seq NFAT5-TCF7L2 NFAT5 chr16 69600277 + TCF7L2 chr10 114900942 + Exonic hg19 PRAD TCGA-HC-7209 4 Out-of-Frame Inter-chr q22.1 Transcription factor q25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 11376 ChimerSeq FusionScan TCGA_RNA-Seq KCNMA1-FARP1 KCNMA1 chr10 79397022 - FARP1 chr13 98865473 + Exonic hg19 PRAD TCGA-HC-7209 3 CDS-5'UTR Inter-chr q22.3 q32.2 Seq+ 11377 ChimerSeq FusionScan TCGA_RNA-Seq RNF144B-PPP3CA RNF144B chr6 18399930 + PPP3CA chr4 102117273 - Exonic hg19 PRAD TCGA-HC-7209 3 Out-of-Frame Inter-chr p22.3 q24 Seq+ 11378 ChimerSeq FusionScan TCGA_RNA-Seq CDKAL1-KIF11 CDKAL1 chr6 20535625 + KIF11 chr10 94366021 + Exonic hg19 PRAD TCGA-HC-7209 2 5'UTR-CDS Inter-chr p22.3 q23.33 11379 ChimerSeq FusionScan TCGA_RNA-Seq AARSD1-CCR7 AARSD1 chr17 41113208 - CCR7 chr17 38715194 - Exonic hg19 PRAD TCGA-HC-7209 2 In-Frame Intra-chr q21.31 q21.2 Seq+ 11380 ChimerSeq FusionScan TCGA_RNA-Seq EFTUD2-DUSP3 EFTUD2 chr17 42961016 - DUSP3 chr17 41847182 - Exonic hg19 PRAD TCGA-HC-7209 2 Out-of-Frame Intra-chr q21.31 q21.31 Seq+ 11381 ChimerSeq FusionScan TCGA_RNA-Seq STX3-MS4A15 STX3 chr11 59523108 + MS4A15 chr11 60535039 + Exonic hg19 PRAD TCGA-HC-7209 2 CDS-5'UTR Intra-chr q12.1 q12.2 Seq+ 11382 ChimerSeq FusionScan TCGA_RNA-Seq MPZL1-DCAF6 MPZL1 chr1 167691479 + DCAF6 chr1 167935866 + Exonic hg19 PRAD TCGA-EJ-A65F 4 Out-of-Frame Intra-chr q24.2 q24.2 Seq+ 11383 ChimerSeq FusionScan TCGA_RNA-Seq PHF3-R3HCC1 PHF3 chr6 64356700 + R3HCC1 chr8 23146018 + Exonic hg19 PRAD TCGA-KK-A8I4 2 CDS-5'UTR Inter-chr q12 p21.3 Seq+ 11384 ChimerSeq FusionScan TCGA_RNA-Seq SLC38A10-SPTAN1 SLC38A10 chr17 79244717 - SPTAN1 chr9 131329016 + Exonic hg19 PRAD TCGA-ZG-A9LN 2 CDS-5'UTR Inter-chr q25.3 q34.11 11385 ChimerSeq FusionScan TCGA_RNA-Seq EYA2-PI3 EYA2 chr20 45523626 + PI3 chr20 43804501 + Exonic hg19 PRAD TCGA-ZG-A9LN 2 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 11386 ChimerSeq FusionScan TCGA_RNA-Seq KDM4B-ASTN2 KDM4B chr19 4969241 + ASTN2 chr9 119382722 - Exonic hg19 PRAD TCGA-G9-A9S7 4 5'UTR-CDS Inter-chr p13.3 q33.1 Seq+ 11387 ChimerSeq FusionScan TCGA_RNA-Seq DIS3L2-DNM1 DIS3L2 chr2 233128150 + DNM1 chr9 130996299 + Exonic hg19 PRAD TCGA-G9-A9S7 3 Out-of-Frame Inter-chr q37.1 q34.11 Seq+ 11388 ChimerSeq FusionScan TCGA_RNA-Seq SREBF1-STAT3 SREBF1 chr17 17726831 - STAT3 chr17 40500557 - Exonic hg19 PRAD TCGA-VP-A87C 4 CDS-5'UTR Intra-chr p11.2 Transcription factor q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 11389 ChimerSeq FusionScan TCGA_RNA-Seq SREBF1-STAT3 SREBF1 chr17 17740040 - STAT3 chr17 40500557 - Exonic hg19 PRAD TCGA-VP-A87C 3 CDS-5'UTR Intra-chr p11.2 Transcription factor q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 11390 ChimerSeq FusionScan TCGA_RNA-Seq PPAP2A-CDC20B PPAP2A chr5 54737678 - CDC20B chr5 54442684 - Exonic hg19 PRAD TCGA-CH-5766 5 In-Frame Intra-chr q11.2 Seq+ 11391 ChimerSeq FusionScan TCGA_RNA-Seq PPAP2A-CDC20B PPAP2A chr5 54830399 - CDC20B chr5 54442684 - Exonic hg19 PRAD TCGA-CH-5766 2 Out-of-Frame Intra-chr q11.2 Seq+ 11392 ChimerSeq FusionScan TCGA_RNA-Seq CAMK2G-NDUFA13 CAMK2G chr10 75574760 - NDUFA13 chr19 19636990 + Exonic hg19 PRAD TCGA-CH-5766 2 3'UTR-CDS Inter-chr q22.2 p13.11 Seq+ 11393 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-M7-A725 18 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11394 ChimerSeq FusionScan TCGA_RNA-Seq SLC4A4-ARHGAP6 SLC4A4 chr4 72263370 + ARHGAP6 chrX 11272827 - Exonic hg19 PRAD TCGA-M7-A725 6 In-Frame Inter-chr q13.3 p22.2 Seq+ 11395 ChimerSeq FusionScan TCGA_RNA-Seq BBS4-CSNK1G1 BBS4 chr15 73028307 + CSNK1G1 chr15 64472653 - Exonic hg19 PRAD TCGA-M7-A725 3 In-Frame Intra-chr q24.1 q22.31 Seq+ 11396 ChimerSeq FusionScan TCGA_RNA-Seq ZFHX3-ZNF821 ZFHX3 chr16 72923629 - ZNF821 chr16 71898145 - Exonic hg19 PRAD TCGA-M7-A725 2 Out-of-Frame Intra-chr q22.3 Tumor suppressor gene Transcription factor q22.2 Transcription factor Seq+ 11397 ChimerSeq FusionScan TCGA_RNA-Seq C21orf2-UMODL1 C21orf2 chr21 45759000 - UMODL1 chr21 43562205 + Exonic hg19 PRAD TCGA-M7-A725 2 CDS-3'UTR Intra-chr q22.3 q22.3 Seq+ 11398 ChimerSeq FusionScan TCGA_RNA-Seq YBX1-AXDND1 YBX1 chr1 43149137 + AXDND1 chr1 179437577 + Exonic hg19 PRAD TCGA-M7-A71Z 2 Out-of-Frame Intra-chr p34.2 Transcription factor q25.2 Seq+ 11399 ChimerSeq FusionScan TCGA_RNA-Seq PMEPA1-ETV4 PMEPA1 chr20 56284529 - ETV4 chr17 41613847 - Exonic hg19 PRAD TCGA-CH-5762 11 In-Frame Inter-chr q13.31 q21.31 Oncogene Transcription factor Seq+ 11400 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-MORC3 TMPRSS2 chr21 42880007 - MORC3 chr21 37705943 + Exonic hg19 PRAD TCGA-CH-5762 3 5'UTR-CDS Intra-chr q22.3 q22.12 Seq+ 11401 ChimerSeq FusionScan TCGA_RNA-Seq PMEPA1-ETV4 PMEPA1 chr20 56286379 - ETV4 chr17 41613847 - Exonic hg19 PRAD TCGA-CH-5762 2 5'UTR-CDS Inter-chr q13.31 q21.31 Oncogene Transcription factor Seq+ 11402 ChimerSeq FusionScan TCGA_RNA-Seq TRIO-IQUB TRIO chr5 14304701 + IQUB chr7 123097620 - Exonic hg19 PRAD TCGA-CH-5741 4 In-Frame Inter-chr p15.2 q31.32 Seq+ 11403 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649521 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-HC-7821 8 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 11404 ChimerSeq FusionScan TCGA_RNA-Seq RABGAP1-NIPSNAP3A RABGAP1 chr9 125761045 + NIPSNAP3A chr9 107521365 + Exonic hg19 PRAD TCGA-HC-7821 4 Out-of-Frame Intra-chr q33.2 q31.1 11405 ChimerSeq FusionScan TCGA_RNA-Seq PIGZ-PRPSAP2 PIGZ chr3 196695557 - PRPSAP2 chr17 18793134 + Exonic hg19 PRAD TCGA-EJ-7797 3 5'UTR-CDS Inter-chr q29 p11.2 Seq+ 11406 ChimerSeq FusionScan TCGA_RNA-Seq TEAD1-MICAL2 TEAD1 chr11 12697108 + MICAL2 chr11 12229569 + Exonic hg19 PRAD TCGA-EJ-5503 4 5'UTR-CDS Intra-chr p15.3 Transcription factor p15.3 Seq+ 11407 ChimerSeq FusionScan TCGA_RNA-Seq ZNF585A-CCDC3 ZNF585A chr19 37646766 - CCDC3 chr10 13040512 - Exonic hg19 PRAD TCGA-V1-A9O5 5 Out-of-Frame Inter-chr q13.12 Transcription factor p13 Seq+ 11408 ChimerSeq FusionScan TCGA_RNA-Seq DMWD-KDM4C DMWD chr19 46294162 - KDM4C chr9 7128065 + Exonic hg19 PRAD TCGA-V1-A9O5 4 In-Frame Inter-chr q13.32 p24.1 Seq+ 11409 ChimerSeq FusionScan TCGA_RNA-Seq KLK2-FGFR2 KLK2 chr19 51376775 + FGFR2 chr10 123310973 - Exonic hg19 PRAD TCGA-V1-A9O5 4 In-Frame Inter-chr q13.33 q26.13 TK:FGFR Oncogene KB Pub Seq+ 11410 ChimerSeq FusionScan TCGA_RNA-Seq LSM14A-TDRD12 LSM14A chr19 34706566 + TDRD12 chr19 33263658 + Exonic hg19 PRAD TCGA-V1-A9O5 3 In-Frame Intra-chr q13.11 Seq+ 11411 ChimerSeq FusionScan TCGA_RNA-Seq KLK2-FGFR2 KLK2 chr19 51380014 + FGFR2 chr10 123310973 - Exonic hg19 PRAD TCGA-V1-A9O5 3 In-Frame Inter-chr q13.33 q26.13 TK:FGFR Oncogene KB Pub Seq+ 11412 ChimerSeq FusionScan TCGA_RNA-Seq KIAA2022-CXorf26 KIAA2022 chrX 74144717 - CXorf26 chrX 75393419 + Exonic hg19 PRAD TCGA-V1-A9O5 2 5'UTR-CDS Intra-chr q13.3 Seq+ 11413 ChimerSeq FusionScan TCGA_RNA-Seq TDRD12-TEAD2 TDRD12 chr19 33268135 + TEAD2 chr19 49854622 - Exonic hg19 PRAD TCGA-V1-A9O5 2 In-Frame Intra-chr q13.11 q13.33 Transcription factor Seq+ 11414 ChimerSeq FusionScan TCGA_RNA-Seq ZFAT-OC90 ZFAT chr8 135725087 - OC90 chr8 133058130 - Exonic hg19 PRAD TCGA-V1-A9O5 2 In-Frame Intra-chr q24.22 Transcription factor q24.22 11415 ChimerSeq FusionScan TCGA_RNA-Seq CCDC3-FXYD1 CCDC3 chr10 13040337 - FXYD1 chr19 35630979 + Exonic hg19 PRAD TCGA-V1-A9O5 2 CDS-5'UTR Inter-chr p13 q13.12 Seq+ 11416 ChimerSeq FusionScan TCGA_RNA-Seq GYS1-PLD3 GYS1 chr19 49488717 - PLD3 chr19 40880387 + Exonic hg19 PRAD TCGA-V1-A9O5 2 Out-of-Frame Intra-chr q13.33 q13.2 11417 ChimerSeq FusionScan TCGA_RNA-Seq FGFR3-AES FGFR3 chr4 1808661 + AES chr19 3061255 - Exonic hg19 PRAD TCGA-EJ-A7NM 7 In-Frame Inter-chr p16.3 TK:FGFR Oncogene p13.3 Seq+ 11418 ChimerSeq FusionScan TCGA_RNA-Seq DDX60-SPOCK3 DDX60 chr4 169157402 - SPOCK3 chr4 167983688 - Exonic hg19 PRAD TCGA-EJ-5509 2 In-Frame Intra-chr q32.3 q32.3 Seq+ 11419 ChimerSeq FusionScan TCGA_RNA-Seq TRAPPC9-JPH1 TRAPPC9 chr8 141034033 - JPH1 chr8 75171738 - Exonic hg19 PRAD TCGA-EJ-5509 2 In-Frame Intra-chr q24.3 q21.11 Seq+ 11420 ChimerSeq FusionScan TCGA_RNA-Seq NRF1-MLXIPL NRF1 chr7 129251665 + MLXIPL chr7 73030507 - Exonic hg19 PRAD TCGA-KK-A7B4 4 5'UTR-CDS Intra-chr q32.2 Tumor suppressor gene Transcription factor q11.23 Transcription factor Seq+ 11421 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649521 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-KK-A8I5 6 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 11422 ChimerSeq FusionScan TCGA_RNA-Seq GTF2H2D-NAIP GTF2H2D chr5 68878256 + NAIP chr5 70266295 - Exonic hg19 PRAD TCGA-HC-8258 2 Out-of-Frame Intra-chr q13.2 11423 ChimerSeq FusionScan TCGA_RNA-Seq BMPR2-MARCH4 BMPR2 chr2 203407170 + 2019_ 3_ 4_ chr2 217124402 - Exonic hg19 PRAD TCGA-HC-8258 2 3'UTR-CDS Intra-chr q33.1 TKL:STKR Tumor suppressor gene q35 Seq+ 11424 ChimerSeq FusionScan TCGA_RNA-Seq C5orf45-RNF130 C5orf45 chr5 179268906 - RNF130 chr5 179440311 - Exonic hg19 PRAD TCGA-KK-A8ID 2 Out-of-Frame Intra-chr q35.3 Seq+ 11425 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42880007 - ETV1 chr7 13971374 - Exonic hg19 PRAD TCGA-HC-7818 8 5'UTR-CDS Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 11426 ChimerSeq FusionScan TCGA_RNA-Seq ZNF329-EPN1 ZNF329 chr19 58653923 - EPN1 chr19 56189892 + Exonic hg19 PRAD TCGA-HC-7818 5 5'UTR-5'UTR Intra-chr q13.43 Transcription factor q13.42 Seq+ 11427 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42870045 - ETV1 chr7 13971374 - Exonic hg19 PRAD TCGA-HC-7818 4 Out-of-Frame Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 11428 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42866282 - ETV1 chr7 13971374 - Exonic hg19 PRAD TCGA-HC-7818 4 Out-of-Frame Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 11429 ChimerSeq FusionScan TCGA_RNA-Seq ZMYND11-LYZL1 ZMYND11 chr10 181499 + LYZL1 chr10 29599038 + Exonic hg19 PRAD TCGA-HC-7818 2 5'UTR-CDS Intra-chr p15.3 Tumor suppressor gene p12.1 Seq+ 11430 ChimerSeq FusionScan TCGA_RNA-Seq KDM6B-DDX42 KDM6B chr17 7743342 + DDX42 chr17 61864393 + Exonic hg19 PRAD TCGA-HC-7818 2 5'UTR-5'UTR Intra-chr p13.1 q23.3 11431 ChimerSeq FusionScan TCGA_RNA-Seq SF1-AMACR SF1 chr11 64543969 - AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-HC-7818 2 In-Frame Inter-chr q13.1 p13.2 11432 ChimerSeq FusionScan TCGA_RNA-Seq SEC24A-C10orf11 SEC24A chr5 133984863 + C10orf11 chr10 77795765 + Exonic hg19 PRAD TCGA-YL-A8SA 3 Out-of-Frame Inter-chr q31.1 Seq+ 11433 ChimerSeq FusionScan TCGA_RNA-Seq PTEN-GRID1 PTEN chr10 89690846 + GRID1 chr10 87489371 - Exonic hg19 PRAD TCGA-YL-A8SA 3 Out-of-Frame Intra-chr q23.31 Oncogene Tumor suppressor gene q23.2 Seq+ 11434 ChimerSeq FusionScan TCGA_RNA-Seq TUSC3-LOXL2 TUSC3 chr8 15601121 + LOXL2 chr8 23225947 - Exonic hg19 PRAD TCGA-HC-7210 3 CDS-5'UTR Intra-chr p22 p21.3 Seq+ 11435 ChimerSeq FusionScan TCGA_RNA-Seq SLC30A6-GNA11 SLC30A6 chr2 32396442 + GNA11 chr19 3110146 + Exonic hg19 PRAD TCGA-CH-5754 2 Out-of-Frame Inter-chr p22.3 p13.3 Oncogene Seq+ 11436 ChimerSeq FusionScan TCGA_RNA-Seq CDC42EP3-REEP1 CDC42EP3 chr2 37898568 - REEP1 chr2 86509365 - Exonic hg19 PRAD TCGA-G9-6347 2 5'UTR-CDS Intra-chr p22.2 p11.2 11437 ChimerSeq FusionScan TCGA_RNA-Seq GABPB2-CCS GABPB2 chr1 151060773 + CCS chr11 66372959 + Exonic hg19 PRAD TCGA-EJ-7791 2 In-Frame Inter-chr q21.3 q13.2 11438 ChimerSeq FusionScan TCGA_RNA-Seq PIGZ-PRPSAP2 PIGZ chr3 196695557 - PRPSAP2 chr17 18793134 + Exonic hg19 PRAD TCGA-EJ-7797 5 5'UTR-CDS Inter-chr q29 p11.2 Seq+ 11439 ChimerSeq FusionScan TCGA_RNA-Seq PCGF3-GET4 PCGF3 chr4 738476 + GET4 chr7 925692 + Exonic hg19 PRAD TCGA-CH-5794 2 Out-of-Frame Inter-chr p16.3 p22.3 11440 ChimerSeq FusionScan TCGA_RNA-Seq PUM2-FAM49A PUM2 chr2 20494136 - FAM49A chr2 16769397 - Exonic hg19 PRAD TCGA-CH-5794 2 CDS-5'UTR Intra-chr p24.1 p24.2 Seq+ 11441 ChimerSeq FusionScan TCGA_RNA-Seq GTF2H2D-NAIP GTF2H2D chr5 68878256 + NAIP chr5 70266295 - Exonic hg19 PRAD TCGA-HC-8258 2 Out-of-Frame Intra-chr q13.2 11442 ChimerSeq FusionScan TCGA_RNA-Seq BMPR2-MARCH4 BMPR2 chr2 203407170 + 2019_ 3_ 4_ chr2 217124402 - Exonic hg19 PRAD TCGA-HC-8258 2 3'UTR-CDS Intra-chr q33.1 TKL:STKR Tumor suppressor gene q35 Seq+ 11443 ChimerSeq FusionScan TCGA_RNA-Seq CHD1-SLCO6A1 CHD1 chr5 98228228 - SLCO6A1 chr5 101748847 - Exonic hg19 PRAD TCGA-HC-A6AP 2 In-Frame Intra-chr q21.1 Tumor suppressor gene q21.1 Seq+ 11444 ChimerSeq FusionScan TCGA_RNA-Seq SHQ1-PSMB7 SHQ1 chr3 72897348 - PSMB7 chr9 127146935 - Exonic hg19 PRAD TCGA-ZG-A9LZ 5 Out-of-Frame Inter-chr p13 Tumor suppressor gene q33.3 Seq+ 11445 ChimerSeq FusionScan TCGA_RNA-Seq FLJ43663-DEPDC1B FLJ43663 chr7 130737183 - DEPDC1B chr5 59901683 - Exonic hg19 PRAD TCGA-ZG-A9LZ 4 3'UTR-CDS Inter-chr q12.1 11446 ChimerSeq FusionScan TCGA_RNA-Seq SHQ1-PSMB7 SHQ1 chr3 72897348 - PSMB7 chr9 127167711 - Exonic hg19 PRAD TCGA-ZG-A9LZ 3 In-Frame Inter-chr p13 Tumor suppressor gene q33.3 Seq+ 11447 ChimerSeq FusionScan TCGA_RNA-Seq PTEN-LIPJ PTEN chr10 89712016 + LIPJ chr10 90362332 + Exonic hg19 PRAD TCGA-ZG-A9LZ 3 Out-of-Frame Intra-chr q23.31 Oncogene Tumor suppressor gene q23.31 KB Seq+ 11448 ChimerSeq FusionScan TCGA_RNA-Seq FLJ43663-DEPDC1B FLJ43663 chr7 130792478 - DEPDC1B chr5 59901683 - Exonic hg19 PRAD TCGA-ZG-A9LZ 2 3'UTR-CDS Inter-chr q12.1 11449 ChimerSeq FusionScan TCGA_RNA-Seq TIA1-ACTR2 TIA1 chr2 70463210 - ACTR2 chr2 65478160 + Exonic hg19 PRAD TCGA-KK-A7AP 5 In-Frame Intra-chr p13.3 p14 TKL:STKR Seq+ 11450 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649521 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-KK-A7AP 5 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 11451 ChimerSeq FusionScan TCGA_RNA-Seq PHF21B-AMACR PHF21B chr22 45404425 - AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-KK-A7AP 2 Out-of-Frame Inter-chr q13.31 p13.2 11452 ChimerSeq FusionScan TCGA_RNA-Seq EYA2-C20orf43 EYA2 chr20 45523626 + C20orf43 chr20 55088370 + Exonic hg19 PRAD TCGA-KK-A7AV 2 5'UTR-CDS Intra-chr q13.12 11453 ChimerSeq FusionScan TCGA_RNA-Seq ZNHIT6-CFHR5 ZNHIT6 chr1 86167839 - CFHR5 chr1 196977616 + Exonic hg19 PRAD TCGA-KC-A7F3 2 Out-of-Frame Intra-chr p22.3 q31.3 11454 ChimerSeq FusionScan TCGA_RNA-Seq YBX1-AXDND1 YBX1 chr1 43149137 + AXDND1 chr1 179437577 + Exonic hg19 PRAD TCGA-M7-A71Z 3 Out-of-Frame Intra-chr p34.2 Transcription factor q25.2 Seq+ 11455 ChimerSeq FusionScan TCGA_RNA-Seq MAPRE1-TM9SF4 MAPRE1 chr20 31427662 + TM9SF4 chr20 30720815 + Exonic hg19 PRAD TCGA-J9-A8CN 6 In-Frame Intra-chr q11.21 q11.21 Seq+ 11456 ChimerSeq FusionScan TCGA_RNA-Seq CSDA-MRPL42 CSDA chr12 10875448 - MRPL42 chr12 93894951 + Exonic hg19 PRAD TCGA-EJ-7315 2 Out-of-Frame Intra-chr q22 Seq+ 11457 ChimerSeq FusionScan TCGA_RNA-Seq FAM91A2-ZADH2 FAM91A2 chr1 149577662 + ZADH2 chr18 72914295 - Exonic hg19 PRAD TCGA-EJ-7315 2 5'UTR-CDS Inter-chr q22.3 11458 ChimerSeq FusionScan TCGA_RNA-Seq POLR2E-SLC44A4 POLR2E chr19 1095257 - SLC44A4 chr6 31831525 - Exonic hg19 PRAD TCGA-EJ-7315 2 CDS-5'UTR Inter-chr p13.3 11459 ChimerSeq FusionScan TCGA_RNA-Seq WWTR1-ATR WWTR1 chr3 149374662 - ATR chr3 142168444 - Exonic hg19 PRAD TCGA-VN-A88M 4 CDS-3'UTR Intra-chr q25.1 q23 Atypical:PIKK Oncogene Tumor suppressor gene Seq+ 11460 ChimerSeq FusionScan TCGA_RNA-Seq MAF1-TMEM205 MAF1 chr8 145161367 + TMEM205 chr19 11456304 - Exonic hg19 PRAD TCGA-YL-A8SB 2 CDS-5'UTR Inter-chr q24.3 p13.2 Seq+ 11461 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-INPP4B TMPRSS2 chr21 42880007 - INPP4B chr4 143191927 - Exonic hg19 PRAD TCGA-V1-A8WS 8 5'UTR-CDS Inter-chr q22.3 q31.21 Tumor suppressor gene Seq+ 11462 ChimerSeq FusionScan TCGA_RNA-Seq CHTF8-TBC1D22A CHTF8 chr16 69165991 - TBC1D22A chr22 47569140 + Exonic hg19 PRAD TCGA-V1-A8WS 7 5'UTR-CDS Inter-chr q22.1 q13.31 Seq+ 11463 ChimerSeq FusionScan TCGA_RNA-Seq HERC2-TMEM145 HERC2 chr15 28544547 - TMEM145 chr19 42818423 + Exonic hg19 PRAD TCGA-V1-A8WS 3 Out-of-Frame Inter-chr q13.2 Seq+ 11464 ChimerSeq FusionScan TCGA_RNA-Seq ERG-TMPRSS2 ERG chr21 39947585 - TMPRSS2 chr21 42852529 - Exonic hg19 PRAD TCGA-V1-A8WS 2 Out-of-Frame Intra-chr q22.2 Oncogene Transcription factor q22.3 Seq+ 11465 ChimerSeq FusionScan TCGA_RNA-Seq ECI1-CDKN3 ECI1 chr16 2301316 - CDKN3 chr14 54868241 + Exonic hg19 PRAD TCGA-V1-A8WS 2 Out-of-Frame Inter-chr p13.3 q22.2 Seq+ 11466 ChimerSeq FusionScan TCGA_RNA-Seq KIF2A-RNF180 KIF2A chr5 61602363 + RNF180 chr5 63665441 + Exonic hg19 PRAD TCGA-J9-A52D 3 In-Frame Intra-chr q12.1 q12.3 Tumor suppressor gene Seq+ 11467 ChimerSeq FusionScan TCGA_RNA-Seq SREBF1-STAT3 SREBF1 chr17 17726831 - STAT3 chr17 40500557 - Exonic hg19 PRAD TCGA-VP-A87C 4 CDS-5'UTR Intra-chr p11.2 Transcription factor q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 11468 ChimerSeq FusionScan TCGA_RNA-Seq SREBF1-STAT3 SREBF1 chr17 17740040 - STAT3 chr17 40500557 - Exonic hg19 PRAD TCGA-VP-A87C 3 CDS-5'UTR Intra-chr p11.2 Transcription factor q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 11469 ChimerSeq FusionScan TCGA_RNA-Seq COBLL1-CYP27A1 COBLL1 chr2 165600196 - CYP27A1 chr2 219674299 + Exonic hg19 PRAD TCGA-CH-5761 2 Out-of-Frame Intra-chr q24.3 q35 11470 ChimerSeq FusionScan TCGA_RNA-Seq RAB11FIP4-ARHGAP23 RAB11FIP4 chr17 29852248 + ARHGAP23 chr17 36614345 + Exonic hg19 PRAD TCGA-G9-A9S0 2 Out-of-Frame Intra-chr q11.2 q12 Seq+ 11471 ChimerSeq FusionScan TCGA_RNA-Seq LSR-CHMP1A LSR chr19 35749967 + CHMP1A chr16 89713739 - Exonic hg19 PRAD TCGA-G9-A9S0 2 In-Frame Inter-chr q13.12 q24.3 11472 ChimerSeq FusionScan TCGA_RNA-Seq TP53-KIAA0753 TP53 chr17 7590694 - KIAA0753 chr17 6498373 - Exonic hg19 PRAD TCGA-EJ-5525 3 5'UTR-CDS Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.1 Seq+ 11473 ChimerSeq FusionScan TCGA_RNA-Seq TFDP2-XRN1 TFDP2 chr3 141820576 - XRN1 chr3 142084208 - Exonic hg19 PRAD TCGA-EJ-5525 2 In-Frame Intra-chr q23 Transcription factor q23 Seq+ 11474 ChimerSeq FusionScan TCGA_RNA-Seq DOPEY2-ELF2 DOPEY2 chr21 37572799 + ELF2 chr4 139983211 - Exonic hg19 PRAD TCGA-EJ-5525 2 Out-of-Frame Inter-chr q22.12 q31.1 Transcription factor Seq+ 11475 ChimerSeq FusionScan TCGA_RNA-Seq ACPP-AXL ACPP chr3 132075699 + AXL chr19 41748787 + Exonic hg19 PRAD TCGA-J4-A6G3 4 In-Frame Inter-chr q22.1 q13.2 TK:Axl Oncogene Seq+ 11476 ChimerSeq FusionScan TCGA_RNA-Seq RASA1-FAM174A RASA1 chr5 86649052 + FAM174A chr5 99897757 + Exonic hg19 PRAD TCGA-ZG-A8QX 3 Out-of-Frame Intra-chr q14.3 q21.1 Seq+ 11477 ChimerSeq FusionScan TCGA_RNA-Seq GRB10-ZPBP GRB10 chr7 50799968 - ZPBP chr7 49977218 - Exonic hg19 PRAD TCGA-ZG-A8QX 2 Out-of-Frame Intra-chr p12.1 p12.2 Seq+ 11478 ChimerSeq FusionScan TCGA_RNA-Seq LRP1-OS9 LRP1 chr12 57552421 + OS9 chr12 58114188 + Exonic hg19 PRAD TCGA-H9-A6BY 8 In-Frame Intra-chr q13.3 q13.3 Seq+ 11479 ChimerSeq FusionScan TCGA_RNA-Seq LRP1-OS9 LRP1 chr12 57552421 + OS9 chr12 58113881 + Exonic hg19 PRAD TCGA-H9-A6BY 4 In-Frame Intra-chr q13.3 q13.3 Seq+ 11480 ChimerSeq FusionScan TCGA_RNA-Seq SERBP1-JTB SERBP1 chr1 67891817 - JTB chr1 153947311 - Exonic hg19 PRAD TCGA-H9-A6BY 2 In-Frame Intra-chr p31.3 q21.3 11481 ChimerSeq FusionScan TCGA_RNA-Seq GOLPH3-SLC6A19 GOLPH3 chr5 32173915 - SLC6A19 chr5 1219017 + Exonic hg19 PRAD TCGA-EJ-5496 2 In-Frame Intra-chr p13.3 p15.33 Seq+ 11482 ChimerSeq FusionScan TCGA_RNA-Seq DTX2-POR DTX2 chr7 76093026 + POR chr7 75583306 + Exonic hg19 PRAD TCGA-ZG-A9KY 3 5'UTR-5'UTR Intra-chr q11.23 Seq+ 11483 ChimerSeq FusionScan TCGA_RNA-Seq AKT3-ADSS AKT3 chr1 244006426 - ADSS chr1 244601070 - Exonic hg19 PRAD TCGA-ZG-A9KY 3 CDS-5'UTR Intra-chr AGC:Akt Oncogene q44 Seq+ 11484 ChimerSeq FusionScan TCGA_RNA-Seq KDM4B-ATCAY KDM4B chr19 5047680 + ATCAY chr19 3902484 + Exonic hg19 PRAD TCGA-ZG-A9KY 2 In-Frame Intra-chr p13.3 p13.3 Seq+ 11485 ChimerSeq FusionScan TCGA_RNA-Seq GSK3B-SEMA5B GSK3B chr3 119582265 - SEMA5B chr3 122680148 - Exonic hg19 PRAD TCGA-ZG-A9KY 2 In-Frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q21.1 Seq+ 11486 ChimerSeq FusionScan TCGA_RNA-Seq MAST2-ST3GAL3 MAST2 chr1 46348067 + ST3GAL3 chr1 44365212 + Exonic hg19 PRAD TCGA-ZG-A9KY 2 In-Frame Intra-chr p34.1 AGC:MAST p34.1 Seq+ 11487 ChimerSeq FusionScan TCGA_RNA-Seq MAGI1-SUCLG2 MAGI1 chr3 66023670 - SUCLG2 chr3 67451275 - Exonic hg19 PRAD TCGA-ZG-A9KY 2 Out-of-Frame Intra-chr Oncogene p14.1 Seq+ 11488 ChimerSeq FusionScan TCGA_RNA-Seq DTX2-POR DTX2 chr7 76091153 + POR chr7 75583306 + Exonic hg19 PRAD TCGA-ZG-A9KY 2 5'UTR-5'UTR Intra-chr q11.23 Seq+ 11489 ChimerSeq FusionScan TCGA_RNA-Seq PKHD1-CAGE1 PKHD1 chr6 51875106 - CAGE1 chr6 7334323 - Exonic hg19 PRAD TCGA-EJ-7782 2 Out-of-Frame Intra-chr p12.2 Oncogene p24.3 Seq+ 11490 ChimerSeq FusionScan TCGA_RNA-Seq CCM2-PEX1 CCM2 chr7 45078025 + PEX1 chr7 92147569 - Exonic hg19 PRAD TCGA-EJ-7782 2 In-Frame Intra-chr p13 q21.2 11491 ChimerSeq FusionScan TCGA_RNA-Seq NBPF15-ARID1A NBPF15 chr1 148568877 + ARID1A chr1 27056141 + Exonic hg19 PRAD TCGA-EJ-7782 2 5'UTR-CDS Intra-chr q21.1 p36.11 Oncogene Tumor suppressor gene 11492 ChimerSeq FusionScan TCGA_RNA-Seq TEAD1-MICAL2 TEAD1 chr11 12697108 + MICAL2 chr11 12229569 + Exonic hg19 PRAD TCGA-EJ-5503 4 5'UTR-CDS Intra-chr p15.3 Transcription factor p15.3 Seq+ 11493 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF38-GSTCD ARHGEF38 chr4 106575326 + GSTCD chr4 106647735 + Exonic hg19 PRAD TCGA-G9-7525 3 In-Frame Intra-chr q24 q24 11494 ChimerSeq FusionScan TCGA_RNA-Seq SMAD9-BEND7 SMAD9 chr13 37494252 - BEND7 chr10 13542080 - Exonic hg19 PRAD TCGA-G9-7525 2 5'UTR-5'UTR Inter-chr q13.3 Transcription factor p13 11495 ChimerSeq FusionScan TCGA_RNA-Seq NCK2-KDM4C NCK2 chr2 106361595 + KDM4C chr9 7165237 + Exonic hg19 PRAD TCGA-G9-7525 2 5'UTR-CDS Inter-chr q12.2 p24.1 Seq+ 11496 ChimerSeq FusionScan TCGA_RNA-Seq DUSP16-LOH12CR1 DUSP16 chr12 12715050 - LOH12CR1 chr12 12588561 + Exonic hg19 PRAD TCGA-G9-7525 2 5'UTR-CDS Intra-chr Seq+ 11497 ChimerSeq FusionScan TCGA_RNA-Seq MBD3-GAK MBD3 chr19 1592520 - GAK chr4 871597 - Exonic hg19 PRAD TCGA-YL-A9WL 3 In-Frame Inter-chr p13.3 Transcription factor p16.3 Other:NAK Seq+ 11498 ChimerSeq FusionScan TCGA_RNA-Seq GAK-MEX3D GAK chr4 875694 - MEX3D chr19 1556922 - Exonic hg19 PRAD TCGA-YL-A9WL 3 Out-of-Frame Inter-chr p16.3 Other:NAK p13.3 Seq+ 11499 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF38-ZNF622 ARHGEF38 chr4 106474118 + ZNF622 chr5 16463851 - Exonic hg19 PRAD TCGA-YL-A9WL 3 In-Frame Inter-chr q24 p15.1 Seq+ 11500 ChimerSeq FusionScan TCGA_RNA-Seq URI1-WDR88 URI1 chr19 30433571 + WDR88 chr19 33655102 + Exonic hg19 PRAD TCGA-YL-A9WL 2 In-Frame Intra-chr q12 q13.11 Seq+ 11501 ChimerSeq FusionScan TCGA_RNA-Seq VGLL3-RBMS3 VGLL3 chr3 87017739 - RBMS3 chr3 29628604 + Exonic hg19 PRAD TCGA-G9-7510 2 In-Frame Intra-chr p12.1 p24.1 Tumor suppressor gene Seq+ 11502 ChimerSeq FusionScan TCGA_RNA-Seq TRIM33-CSDE1 TRIM33 chr1 114945381 - CSDE1 chr1 115282511 - Exonic hg19 PRAD TCGA-CH-5750 2 In-Frame Intra-chr p13.2 Oncogene p13.2 Seq+ 11503 ChimerSeq FusionScan TCGA_RNA-Seq RNF10-FBL RNF10 chr12 120972771 + FBL chr19 40325453 - Exonic hg19 PRAD TCGA-G9-6378 4 Out-of-Frame Inter-chr q24.31 Seq+ 11504 ChimerSeq FusionScan TCGA_RNA-Seq FBXO25-YLPM1 FBXO25 chr8 363213 + YLPM1 chr14 75295915 + Exonic hg19 PRAD TCGA-G9-6496 2 Out-of-Frame Inter-chr p23.3 Tumor suppressor gene q24.3 11505 ChimerSeq FusionScan TCGA_RNA-Seq CBLB-ALCAM CBLB chr3 105572257 - ALCAM chr3 105290695 + Exonic hg19 PRAD TCGA-HC-7075 2 In-Frame Intra-chr q13.11 q13.11 11506 ChimerSeq FusionScan TCGA_RNA-Seq SKIV2L2-SCCPDH SKIV2L2 chr5 54711960 + SCCPDH chr1 246890193 + Exonic hg19 PRAD TCGA-EJ-5519 5 In-Frame Inter-chr q11.2 q44 Seq+ 11507 ChimerSeq FusionScan TCGA_RNA-Seq SLC11A2-CDC27 SLC11A2 chr12 51420092 - CDC27 chr17 45206887 - Exonic hg19 PRAD TCGA-X4-A8KQ 3 5'UTR-CDS Inter-chr q13.12 q21.32 Seq+ 11508 ChimerSeq FusionScan TCGA_RNA-Seq SLC11A2-CDC27 SLC11A2 chr12 51420097 - CDC27 chr17 45206887 - Exonic hg19 PRAD TCGA-X4-A8KQ 3 5'UTR-CDS Inter-chr q13.12 q21.32 Seq+ 11509 ChimerSeq FusionScan TCGA_RNA-Seq ANTXR2-GDEP ANTXR2 chr4 80952776 - GDEP chr4 80782443 + Exonic hg19 PRAD TCGA-EJ-7312 2 CDS-5'UTR Intra-chr q21.21 Seq+ 11510 ChimerSeq FusionScan TCGA_RNA-Seq ACTN4-MGST2 ACTN4 chr19 39138547 + MGST2 chr4 140616350 + Exonic hg19 PRAD TCGA-EJ-A46E 2 Out-of-Frame Inter-chr q31.1 Seq+ 11511 ChimerSeq FusionScan TCGA_RNA-Seq TMEM39A-EPHA6 TMEM39A chr3 119171293 - EPHA6 chr3 96706173 + Exonic hg19 PRAD TCGA-EJ-5505 2 In-Frame Intra-chr q13.33 q11.2 Seq+ 11512 ChimerSeq FusionScan TCGA_RNA-Seq WWTR1-ATR WWTR1 chr3 149374662 - ATR chr3 142168444 - Exonic hg19 PRAD TCGA-VN-A88M 4 CDS-3'UTR Intra-chr q25.1 q23 Atypical:PIKK Oncogene Tumor suppressor gene Seq+ 11513 ChimerSeq FusionScan TCGA_RNA-Seq GALNT7-CEP44 GALNT7 chr4 174225269 + CEP44 chr4 175252632 + Exonic hg19 PRAD TCGA-VP-AA1N 2 In-Frame Intra-chr q34.1 q34.1 Seq+ 11514 ChimerSeq FusionScan TCGA_RNA-Seq SRRM2-SNRPE SRRM2 chr16 2810500 + SNRPE chr1 203839004 + Exonic hg19 PRAD TCGA-V1-A8X3 3 Out-of-Frame Inter-chr p13.3 q32.1 Seq+ 11515 ChimerSeq FusionScan TCGA_RNA-Seq MBD3-GAK MBD3 chr19 1592520 - GAK chr4 871597 - Exonic hg19 PRAD TCGA-YL-A9WL 3 In-Frame Inter-chr p13.3 Transcription factor p16.3 Other:NAK Seq+ 11516 ChimerSeq FusionScan TCGA_RNA-Seq GAK-MEX3D GAK chr4 875694 - MEX3D chr19 1556922 - Exonic hg19 PRAD TCGA-YL-A9WL 3 Out-of-Frame Inter-chr p16.3 Other:NAK p13.3 Seq+ 11517 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF38-ZNF622 ARHGEF38 chr4 106474118 + ZNF622 chr5 16463851 - Exonic hg19 PRAD TCGA-YL-A9WL 3 In-Frame Inter-chr q24 p15.1 Seq+ 11518 ChimerSeq FusionScan TCGA_RNA-Seq URI1-WDR88 URI1 chr19 30433571 + WDR88 chr19 33655102 + Exonic hg19 PRAD TCGA-YL-A9WL 2 In-Frame Intra-chr q12 q13.11 Seq+ 11519 ChimerSeq FusionScan TCGA_RNA-Seq CCT3-RAB13 CCT3 chr1 156303337 - RAB13 chr1 153957257 - Exonic hg19 PRAD TCGA-KK-A8I6 4 In-Frame Intra-chr q22 q21.3 Seq+ 11520 ChimerSeq FusionScan TCGA_RNA-Seq NDRG1-ERG NDRG1 chr8 134292474 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-KK-A8I6 2 In-Frame Inter-chr q24.22 Tumor suppressor gene q22.2 Oncogene Transcription factor KB Pub Seq+ 11521 ChimerSeq FusionScan TCGA_RNA-Seq PPIB-FNIP2 PPIB chr15 64452302 - FNIP2 chr4 159782758 + Exonic hg19 PRAD TCGA-KK-A8I6 2 Out-of-Frame Inter-chr q22.31 q32.1 11522 ChimerSeq FusionScan TCGA_RNA-Seq SMYD3-TRIM58 SMYD3 chr1 246490502 - TRIM58 chr1 248023918 + Exonic hg19 PRAD TCGA-EJ-7789 3 In-Frame Intra-chr q44 Transcription factor q44 Seq+ 11523 ChimerSeq FusionScan TCGA_RNA-Seq KLK2-PVRL2 KLK2 chr19 51376775 + PVRL2 chr19 45368527 + Exonic hg19 PRAD TCGA-G9-7509 5 In-Frame Intra-chr q13.33 Seq+ 11524 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-HC-7077 14 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11525 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41623036 - Exonic hg19 PRAD TCGA-HC-7077 7 5'UTR-5'UTR Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11526 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42870045 - ETV4 chr17 41623036 - Exonic hg19 PRAD TCGA-HC-7077 5 CDS-5'UTR Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11527 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41613847 - Exonic hg19 PRAD TCGA-HC-7077 4 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11528 ChimerSeq FusionScan TCGA_RNA-Seq POLR2J2-DAD1 POLR2J2 chr7 102311998 - DAD1 chr14 23044133 - Exonic hg19 PRAD TCGA-HC-7077 2 Out-of-Frame Inter-chr q22.1 q11.2 Seq+ 11529 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42870045 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-HC-7077 2 In-Frame Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11530 ChimerSeq FusionScan TCGA_RNA-Seq GCN1L1-METTL1 GCN1L1 chr12 120632482 - METTL1 chr12 58165040 - Exonic hg19 PRAD TCGA-2A-A8VT 3 Out-of-Frame Intra-chr q14.1 Seq+ 11531 ChimerSeq FusionScan TCGA_RNA-Seq STAT3-ETV4 STAT3 chr17 40468806 - ETV4 chr17 41611353 - Exonic hg19 PRAD TCGA-EJ-5511 6 In-Frame Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q21.31 Oncogene Transcription factor Seq+ 11532 ChimerSeq FusionScan TCGA_RNA-Seq TM2D3-PTRF TM2D3 chr15 102190206 - PTRF chr17 40557406 - Exonic hg19 PRAD TCGA-EJ-5511 4 In-Frame Inter-chr q26.3 Seq+ 11533 ChimerSeq FusionScan TCGA_RNA-Seq TM2D3-PTRF TM2D3 chr15 102192473 - PTRF chr17 40557406 - Exonic hg19 PRAD TCGA-EJ-5511 2 Out-of-Frame Inter-chr q26.3 Seq+ 11534 ChimerSeq FusionScan TCGA_RNA-Seq CSDA-MRPL42 CSDA chr12 10875448 - MRPL42 chr12 93894951 + Exonic hg19 PRAD TCGA-EJ-7315 2 Out-of-Frame Intra-chr q22 Seq+ 11535 ChimerSeq FusionScan TCGA_RNA-Seq FAM91A2-ZADH2 FAM91A2 chr1 149577662 + ZADH2 chr18 72914295 - Exonic hg19 PRAD TCGA-EJ-7315 2 5'UTR-CDS Inter-chr q22.3 11536 ChimerSeq FusionScan TCGA_RNA-Seq POLR2E-SLC44A4 POLR2E chr19 1095257 - SLC44A4 chr6 31831525 - Exonic hg19 PRAD TCGA-EJ-7315 2 CDS-5'UTR Inter-chr p13.3 11537 ChimerSeq FusionScan TCGA_RNA-Seq PRRC1-SPINK6 PRRC1 chr5 126853468 + SPINK6 chr5 147594467 + Exonic hg19 PRAD TCGA-YL-A8SH 2 5'UTR-CDS Intra-chr q23.2 q32 Seq+ 11538 ChimerSeq FusionScan TCGA_RNA-Seq CDC27-MYL4 CDC27 chr17 45266511 - MYL4 chr17 45286754 + Exonic hg19 PRAD TCGA-HC-7213 4 CDS-5'UTR Intra-chr q21.32 q21.32 Seq+ 11539 ChimerSeq FusionScan TCGA_RNA-Seq ELAC2-COX10 ELAC2 chr17 12919084 - COX10 chr17 14063193 + Exonic hg19 PRAD TCGA-HC-7213 3 In-Frame Intra-chr p12 p12 Seq+ 11540 ChimerSeq FusionScan TCGA_RNA-Seq GALNT2-TAF5L GALNT2 chr1 230391090 + TAF5L chr1 229750232 - Exonic hg19 PRAD TCGA-HC-7213 2 CDS-5'UTR Intra-chr q42.13 q42.13 11541 ChimerSeq FusionScan TCGA_RNA-Seq WDR4-CUX1 WDR4 chr21 44270150 - CUX1 chr7 101559394 + Exonic hg19 PRAD TCGA-HC-7213 2 3'UTR-CDS Inter-chr q22.3 q22.1 Tumor suppressor gene Transcription factor 11542 ChimerSeq FusionScan TCGA_RNA-Seq SLC9A9-PDLIM3 SLC9A9 chr3 143513842 - PDLIM3 chr4 186427806 - Exonic hg19 PRAD TCGA-4L-AA1F 2 In-Frame Inter-chr q24 q35.1 Seq+ 11543 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42880007 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-EJ-7788 14 5'UTR-CDS Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 11544 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42870045 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-EJ-7788 4 Out-of-Frame Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 11545 ChimerSeq FusionScan TCGA_RNA-Seq TMEM68-ZNF821 TMEM68 chr8 56685827 - ZNF821 chr16 71913926 - Exonic hg19 PRAD TCGA-KK-A8IM 2 5'UTR-5'UTR Inter-chr q12.1 q22.2 Transcription factor Seq+ 11546 ChimerSeq FusionScan TCGA_RNA-Seq RRAS2-FHIT RRAS2 chr11 14380308 - FHIT chr3 59908140 - Exonic hg19 PRAD TCGA-KK-A7B3 6 In-Frame Inter-chr p15.2 p14.2 Tumor suppressor gene Seq+ 11547 ChimerSeq FusionScan TCGA_RNA-Seq RRAS2-FHIT RRAS2 chr11 14380308 - FHIT chr3 59738047 - Exonic hg19 PRAD TCGA-KK-A7B3 6 In-Frame Inter-chr p15.2 p14.2 Tumor suppressor gene Seq+ 11548 ChimerSeq FusionScan TCGA_RNA-Seq STAT3-ETV4 STAT3 chr17 40468806 - ETV4 chr17 41611353 - Exonic hg19 PRAD TCGA-EJ-5511 6 In-Frame Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q21.31 Oncogene Transcription factor Seq+ 11549 ChimerSeq FusionScan TCGA_RNA-Seq TM2D3-PTRF TM2D3 chr15 102190206 - PTRF chr17 40557406 - Exonic hg19 PRAD TCGA-EJ-5511 4 In-Frame Inter-chr q26.3 Seq+ 11550 ChimerSeq FusionScan TCGA_RNA-Seq TM2D3-PTRF TM2D3 chr15 102192473 - PTRF chr17 40557406 - Exonic hg19 PRAD TCGA-EJ-5511 2 Out-of-Frame Inter-chr q26.3 Seq+ 11551 ChimerSeq FusionScan TCGA_RNA-Seq SIK3-TMPRSS2 SIK3 chr11 116968858 - TMPRSS2 chr21 42870116 - Exonic hg19 PRAD TCGA-EJ-5495 2 Out-of-Frame Inter-chr q23.3 q22.3 Seq+ 11552 ChimerSeq FusionScan TCGA_RNA-Seq HBS1L-IL9 HBS1L chr6 135371719 - IL9 chr5 135228199 - Exonic hg19 PRAD TCGA-EJ-7794 2 Out-of-Frame Inter-chr q23.3 q31.1 Seq+ 11553 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-HC-7077 14 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11554 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41623036 - Exonic hg19 PRAD TCGA-HC-7077 7 5'UTR-5'UTR Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11555 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42870045 - ETV4 chr17 41623036 - Exonic hg19 PRAD TCGA-HC-7077 5 CDS-5'UTR Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11556 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41613847 - Exonic hg19 PRAD TCGA-HC-7077 4 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11557 ChimerSeq FusionScan TCGA_RNA-Seq POLR2J2-DAD1 POLR2J2 chr7 102311998 - DAD1 chr14 23044133 - Exonic hg19 PRAD TCGA-HC-7077 2 Out-of-Frame Inter-chr q22.1 q11.2 Seq+ 11558 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42870045 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-HC-7077 2 In-Frame Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11559 ChimerSeq FusionScan TCGA_RNA-Seq PPAP2A-CDC20B PPAP2A chr5 54737678 - CDC20B chr5 54442684 - Exonic hg19 PRAD TCGA-CH-5766 6 In-Frame Intra-chr q11.2 Seq+ 11560 ChimerSeq FusionScan TCGA_RNA-Seq PPAP2A-CDC20B PPAP2A chr5 54830399 - CDC20B chr5 54442684 - Exonic hg19 PRAD TCGA-CH-5766 2 Out-of-Frame Intra-chr q11.2 Seq+ 11561 ChimerSeq FusionScan TCGA_RNA-Seq CAMK2G-NDUFA13 CAMK2G chr10 75574760 - NDUFA13 chr19 19636990 + Exonic hg19 PRAD TCGA-CH-5766 2 3'UTR-CDS Inter-chr q22.2 p13.11 Seq+ 11562 ChimerSeq FusionScan TCGA_RNA-Seq GOLGA4-NPC1 GOLGA4 chr3 37343823 + NPC1 chr18 21153538 - Exonic hg19 PRAD TCGA-CH-5766 2 Out-of-Frame Inter-chr p22.2 q11.2 11563 ChimerSeq FusionScan TCGA_RNA-Seq BRWD1-RAPGEF4 BRWD1 chr21 40670357 - RAPGEF4 chr2 173913327 + Exonic hg19 PRAD TCGA-HC-7081 3 Out-of-Frame Inter-chr q22.2 q31.1 Seq+ 11564 ChimerSeq FusionScan TCGA_RNA-Seq NAA25-WSCD2 NAA25 chr12 112546519 - WSCD2 chr12 108620766 + Exonic hg19 PRAD TCGA-HC-7230 2 Out-of-Frame Intra-chr q24.13 q23.3 Seq+ 11565 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-CH-5763 11 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11566 ChimerSeq FusionScan TCGA_RNA-Seq ACTG2-REG3G ACTG2 chr2 74120178 + REG3G chr2 79253208 + Exonic hg19 PRAD TCGA-CH-5763 2 5'UTR-5'UTR Intra-chr p13.1 p12 11567 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42880007 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-EJ-5501 17 5'UTR-CDS Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 11568 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42879876 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-EJ-5501 6 In-Frame Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 11569 ChimerSeq FusionScan TCGA_RNA-Seq PHF21B-AMACR PHF21B chr22 45404425 - AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-EJ-5501 2 Out-of-Frame Inter-chr q13.31 p13.2 11570 ChimerSeq FusionScan TCGA_RNA-Seq MEF2D-APOA2 MEF2D chr1 156470277 - APOA2 chr1 161193215 - Exonic hg19 PRAD TCGA-EJ-5518 3 5'UTR-5'UTR Intra-chr q22 Transcription factor q23.3 Seq+ 11571 ChimerSeq FusionScan TCGA_RNA-Seq ZNF329-ZSCAN18 ZNF329 chr19 58653923 - ZSCAN18 chr19 58601753 - Exonic hg19 PRAD TCGA-EJ-5518 2 5'UTR-5'UTR Intra-chr q13.43 Transcription factor q13.43 Transcription factor 11572 ChimerSeq FusionScan TCGA_RNA-Seq TOR1AIP2-IFI16 TOR1AIP2 chr1 179846373 - IFI16 chr1 159015086 + Exonic hg19 PRAD TCGA-EJ-5518 2 5'UTR-CDS Intra-chr q25.2 q23.1 Tumor suppressor gene Seq+ 11573 ChimerSeq FusionScan TCGA_RNA-Seq WWC1-SNTG2 WWC1 chr5 167841595 + SNTG2 chr2 1161233 + Exonic hg19 PRAD TCGA-J4-A83J 4 Out-of-Frame Inter-chr q34 Seq+ 11574 ChimerSeq FusionScan TCGA_RNA-Seq TUBB3-TRPM5 TUBB3 chr16 89989866 + TRPM5 chr11 2439821 - Exonic hg19 PRAD TCGA-V1-A9ZI 2 Out-of-Frame Inter-chr q24.3 p15.5 Seq+ 11575 ChimerSeq FusionScan TCGA_RNA-Seq DYNC1H1-EVL DYNC1H1 chr14 102478807 + EVL chr14 100551023 + Exonic hg19 PRAD TCGA-YJ-A8SW 5 Out-of-Frame Intra-chr q32.31 q32.2 Seq+ 11576 ChimerSeq FusionScan TCGA_RNA-Seq DHX30-LIMD1 DHX30 chr3 47844702 + LIMD1 chr3 45707141 + Exonic hg19 PRAD TCGA-YJ-A8SW 4 5'UTR-CDS Intra-chr p21.31 p21.31 Tumor suppressor gene Seq+ 11577 ChimerSeq FusionScan TCGA_RNA-Seq EPS15L1-CPAMD8 EPS15L1 chr19 16582723 - CPAMD8 chr19 17049256 - Exonic hg19 PRAD TCGA-YJ-A8SW 4 In-Frame Intra-chr p13.11 p13.11 Seq+ 11578 ChimerSeq FusionScan TCGA_RNA-Seq PRUNE-RAB7A PRUNE chr1 150981147 + RAB7A chr3 128514202 + Exonic hg19 PRAD TCGA-YJ-A8SW 2 CDS-5'UTR Inter-chr q21.3 Tumor suppressor gene Seq+ 11579 ChimerSeq FusionScan TCGA_RNA-Seq IMMP2L-DOCK4 IMMP2L chr7 111161368 - DOCK4 chr7 111409733 - Exonic hg19 PRAD TCGA-YJ-A8SW 2 Out-of-Frame Intra-chr q31.1 q31.1 KB Pub Seq+ 11580 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-RNF139 PVT1 chr8 128806980 + RNF139 chr8 125498071 + Exonic hg19 PRAD TCGA-YJ-A8SW 2 5'UTR-CDS Intra-chr q24.21 q24.13 Seq+ 11581 ChimerSeq FusionScan TCGA_RNA-Seq HDLBP-NSRP1 HDLBP chr2 242169247 - NSRP1 chr17 28499559 + Exonic hg19 PRAD TCGA-YJ-A8SW 2 In-Frame Inter-chr q37.3 q11.2 Seq+ 11582 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649521 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-G9-7522 9 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 11583 ChimerSeq FusionScan TCGA_RNA-Seq RNF41-SARNP RNF41 chr12 56615543 - SARNP chr12 56146624 - Exonic hg19 PRAD TCGA-J4-A67S 7 3'UTR-3'UTR Intra-chr q13.3 q13.2 Seq+ 11584 ChimerSeq FusionScan TCGA_RNA-Seq RNF41-SARNP RNF41 chr12 56615686 - SARNP chr12 56146624 - Exonic hg19 PRAD TCGA-J4-A67S 3 5'UTR-3'UTR Intra-chr q13.3 q13.2 Seq+ 11585 ChimerSeq FusionScan TCGA_RNA-Seq CASZ1-PRKD2 CASZ1 chr1 10710748 - PRKD2 chr19 47185005 - Exonic hg19 PRAD TCGA-J4-A67S 2 In-Frame Inter-chr p36.22 Transcription factor q13.32 Seq+ 11586 ChimerSeq FusionScan TCGA_RNA-Seq FBXL5-RAB28 FBXL5 chr4 15656826 - RAB28 chr4 13481150 - Exonic hg19 PRAD TCGA-M7-A724 2 In-Frame Intra-chr p15.32 p15.33 Seq+ 11587 ChimerSeq FusionScan TCGA_RNA-Seq ATP11B-CARS ATP11B chr3 182563310 + CARS chr11 3026663 - Exonic hg19 PRAD TCGA-EJ-5507 10 In-Frame Inter-chr q26.33 Oncogene Seq+ 11588 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-PIK3CA TBL1XR1 chr3 176914908 - PIK3CA chr3 178916537 + Exonic hg19 PRAD TCGA-EJ-5507 3 5'UTR-5'UTR Intra-chr q26.32 q26.32 Oncogene Seq+ 11589 ChimerSeq FusionScan TCGA_RNA-Seq ATP11B-CARS ATP11B chr3 182566345 + CARS chr11 3026663 - Exonic hg19 PRAD TCGA-EJ-5507 2 Out-of-Frame Inter-chr q26.33 Oncogene Seq+ 11590 ChimerSeq FusionScan TCGA_RNA-Seq RRBP1-MACROD2 RRBP1 chr20 17662672 - MACROD2 chr20 15843389 + Exonic hg19 PRAD TCGA-HC-7736 6 5'UTR-5'UTR Intra-chr p12.1 p12.1 Seq+ 11591 ChimerSeq FusionScan TCGA_RNA-Seq ST14-RABEP2 ST14 chr11 130064632 + RABEP2 chr16 28922500 - Exonic hg19 PRAD TCGA-XK-AAJP 2 In-Frame Inter-chr q24.3 p11.2 11592 ChimerSeq FusionScan TCGA_RNA-Seq C2orf63-FAM98A C2orf63 chr2 55459358 - FAM98A chr2 33812387 - Exonic hg19 PRAD TCGA-HC-A48F 2 5'UTR-CDS Intra-chr p22.3 Seq+ 11593 ChimerSeq FusionScan TCGA_RNA-Seq BRWD1-RAPGEF4 BRWD1 chr21 40670357 - RAPGEF4 chr2 173913327 + Exonic hg19 PRAD TCGA-HC-7081 3 Out-of-Frame Inter-chr q22.2 q31.1 Seq+ 11594 ChimerSeq FusionScan TCGA_RNA-Seq PDIA4-HACE1 PDIA4 chr7 148725412 - HACE1 chr6 105232360 - Exonic hg19 PRAD TCGA-KK-A6E6 2 Out-of-Frame Inter-chr q36.1 q16.3 Tumor suppressor gene Seq+ 11595 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-SKIL SLC45A3 chr1 205649521 - SKIL chr3 170077486 + Exonic hg19 PRAD TCGA-KK-A8IL 3 5'UTR-5'UTR Inter-chr q32.1 q26.2 Tumor suppressor gene Transcription factor Seq+ 11596 ChimerSeq FusionScan TCGA_RNA-Seq NEDD4L-MORC3 NEDD4L chr18 55833093 + MORC3 chr21 37728917 + Exonic hg19 PRAD TCGA-KK-A8IL 2 In-Frame Inter-chr q21.31 Tumor suppressor gene q22.12 Seq+ 11597 ChimerSeq FusionScan TCGA_RNA-Seq KLK2-PVRL2 KLK2 chr19 51376775 + PVRL2 chr19 45368527 + Exonic hg19 PRAD TCGA-G9-7509 5 In-Frame Intra-chr q13.33 Seq+ 11598 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42880007 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-EJ-7788 14 5'UTR-CDS Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 11599 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42870045 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-EJ-7788 4 Out-of-Frame Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 11600 ChimerSeq FusionScan TCGA_RNA-Seq BMPR1A-ENTPD1 BMPR1A chr10 88659883 + ENTPD1 chr10 97604232 + Exonic hg19 PRAD TCGA-HC-7231 8 In-Frame Intra-chr q23.2 TKL:STKR Oncogene Tumor suppressor gene q24.1 Seq+ 11601 ChimerSeq FusionScan TCGA_RNA-Seq RASA1-FAM174A RASA1 chr5 86649052 + FAM174A chr5 99897757 + Exonic hg19 PRAD TCGA-ZG-A8QX 3 Out-of-Frame Intra-chr q14.3 q21.1 Seq+ 11602 ChimerSeq FusionScan TCGA_RNA-Seq GRB10-ZPBP GRB10 chr7 50799968 - ZPBP chr7 49977218 - Exonic hg19 PRAD TCGA-ZG-A8QX 2 Out-of-Frame Intra-chr p12.1 p12.2 Seq+ 11603 ChimerSeq FusionScan TCGA_RNA-Seq PPAP2A-SMN2 PPAP2A chr5 54830399 - SMN2 chr5 69372845 + Exonic hg19 PRAD TCGA-V1-A8MJ 4 Out-of-Frame Intra-chr 11604 ChimerSeq FusionScan TCGA_RNA-Seq PPAP2A-SMN1 PPAP2A chr5 54830399 - SMN1 chr5 70248265 + Exonic hg19 PRAD TCGA-V1-A8MJ 4 CDS-3'UTR Intra-chr Seq+ 11605 ChimerSeq FusionScan TCGA_RNA-Seq PPAP2A-SMN1 PPAP2A chr5 54830399 - SMN1 chr5 70247767 + Exonic hg19 PRAD TCGA-V1-A8MJ 4 Out-of-Frame Intra-chr Seq+ 11606 ChimerSeq FusionScan TCGA_RNA-Seq FUBP1-DNAJB4 FUBP1 chr1 78444568 - DNAJB4 chr1 78478734 + Exonic hg19 PRAD TCGA-YL-A8SF 2 Out-of-Frame Intra-chr p31.1 Oncogene p31.1 Tumor suppressor gene Seq+ 11607 ChimerSeq FusionScan TCGA_RNA-Seq DYNC1LI1-MRPS11 DYNC1LI1 chr3 32582528 - MRPS11 chr15 89020219 + Exonic hg19 PRAD TCGA-G9-6354 4 In-Frame Inter-chr p22.3 q25.3 Seq+ 11608 ChimerSeq FusionScan TCGA_RNA-Seq NFIC-ZBTB7A NFIC chr19 3359683 + ZBTB7A chr19 4055245 - Exonic hg19 PRAD TCGA-G9-6354 2 CDS-5'UTR Intra-chr p13.3 Transcription factor p13.3 Transcription factor 11609 ChimerSeq FusionScan TCGA_RNA-Seq GNA11-NOC4L GNA11 chr19 3094785 + NOC4L chr12 132635525 + Exonic hg19 PRAD TCGA-EJ-A46B 2 In-Frame Inter-chr p13.3 Oncogene q24.33 11610 ChimerSeq FusionScan TCGA_RNA-Seq ALDH3A2-PITPNM2 ALDH3A2 chr17 19568360 + PITPNM2 chr12 123477216 - Exonic hg19 PRAD TCGA-G9-6494 2 In-Frame Inter-chr p11.2 q24.31 Seq+ 11611 ChimerSeq FusionScan TCGA_RNA-Seq HSD17B6-PATZ1 HSD17B6 chr12 57157198 + PATZ1 chr22 31738946 - Exonic hg19 PRAD TCGA-G9-6494 2 5'UTR-CDS Inter-chr q13.3 q12.2 Transcription factor 11612 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42880007 - ETV1 chr7 13971374 - Exonic hg19 PRAD TCGA-HC-7818 8 5'UTR-CDS Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 11613 ChimerSeq FusionScan TCGA_RNA-Seq ZNF329-EPN1 ZNF329 chr19 58653923 - EPN1 chr19 56189892 + Exonic hg19 PRAD TCGA-HC-7818 5 5'UTR-5'UTR Intra-chr q13.43 Transcription factor q13.42 Seq+ 11614 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42866282 - ETV1 chr7 13971374 - Exonic hg19 PRAD TCGA-HC-7818 4 Out-of-Frame Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 11615 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42870045 - ETV1 chr7 13971374 - Exonic hg19 PRAD TCGA-HC-7818 4 Out-of-Frame Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 11616 ChimerSeq FusionScan TCGA_RNA-Seq KDM6B-DDX42 KDM6B chr17 7743342 + DDX42 chr17 61864393 + Exonic hg19 PRAD TCGA-HC-7818 2 5'UTR-5'UTR Intra-chr p13.1 q23.3 11617 ChimerSeq FusionScan TCGA_RNA-Seq SF1-AMACR SF1 chr11 64543969 - AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-HC-7818 2 In-Frame Inter-chr q13.1 p13.2 11618 ChimerSeq FusionScan TCGA_RNA-Seq ZMYND11-LYZL1 ZMYND11 chr10 181499 + LYZL1 chr10 29599038 + Exonic hg19 PRAD TCGA-HC-7818 2 5'UTR-CDS Intra-chr p15.3 Tumor suppressor gene p12.1 Seq+ 11619 ChimerSeq FusionScan TCGA_RNA-Seq ELK4-HDAC3 ELK4 chr1 205600759 - HDAC3 chr5 141007754 - Exonic hg19 PRAD TCGA-YL-A8SK 2 5'UTR-CDS Inter-chr q32.1 Transcription factor q31.3 Tumor suppressor gene 11620 ChimerSeq FusionScan TCGA_RNA-Seq PDS5B-CRYBB1 PDS5B chr13 33160730 + CRYBB1 chr22 27012302 - Exonic hg19 PRAD TCGA-KK-A8IJ 5 5'UTR-5'UTR Inter-chr q13.1 Tumor suppressor gene q12.1 Seq+ 11621 ChimerSeq FusionScan TCGA_RNA-Seq PDS5B-CRYBB1 PDS5B chr13 33160730 + CRYBB1 chr22 27008154 - Exonic hg19 PRAD TCGA-KK-A8IJ 4 5'UTR-CDS Inter-chr q13.1 Tumor suppressor gene q12.1 Seq+ 11622 ChimerSeq FusionScan TCGA_RNA-Seq PNPLA7-WDR85 PNPLA7 chr9 140409830 - WDR85 chr9 140450100 - Exonic hg19 PRAD TCGA-HC-7740 2 In-Frame Intra-chr q34.3 Seq+ 11623 ChimerSeq FusionScan TCGA_RNA-Seq NCK1-AMACR NCK1 chr3 136581161 + AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-HC-8213 2 5'UTR-CDS Inter-chr q22.3 p13.2 11624 ChimerSeq FusionScan TCGA_RNA-Seq TOB2-MRPS18B TOB2 chr22 41842382 - MRPS18B chr6 30592659 + Exonic hg19 PRAD TCGA-2A-A8W1 4 5'UTR-3'UTR Inter-chr q13.2 Seq+ 11625 ChimerSeq FusionScan TCGA_RNA-Seq UBE2E2-ZNF385D UBE2E2 chr3 23258803 + ZNF385D chr3 21706520 - Exonic hg19 PRAD TCGA-2A-A8W1 3 Out-of-Frame Intra-chr p24.3 p24.3 Transcription factor Seq+ 11626 ChimerSeq FusionScan TCGA_RNA-Seq ST7-PTPRZ1 ST7 chr7 116593745 + PTPRZ1 chr7 121568209 + Exonic hg19 PRAD TCGA-2A-A8W1 3 In-Frame Intra-chr q31.2 Tumor suppressor gene q31.32 Seq+ 11627 ChimerSeq FusionScan TCGA_RNA-Seq SH3GLB2-GTSE1 SH3GLB2 chr9 131790370 - GTSE1 chr22 46722332 + Exonic hg19 PRAD TCGA-2A-A8W1 2 Out-of-Frame Inter-chr q34.11 q13.31 Seq+ 11628 ChimerSeq FusionScan TCGA_RNA-Seq TMEM97-BLMH TMEM97 chr17 26646391 + BLMH chr17 28601215 - Exonic hg19 PRAD TCGA-HC-7742 4 In-Frame Intra-chr q11.2 q11.2 Seq+ 11629 ChimerSeq FusionScan TCGA_RNA-Seq PTEN-C1orf226 PTEN chr10 89653866 + C1orf226 chr1 162352971 + Exonic hg19 PRAD TCGA-VP-A87J 5 In-Frame Inter-chr q23.31 Oncogene Tumor suppressor gene q23.3 Seq+ 11630 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-GUCA2A TMPRSS2 chr21 42880007 - GUCA2A chr1 42629281 - Exonic hg19 PRAD TCGA-KC-A4BR 16 5'UTR-CDS Inter-chr q22.3 p34.2 Seq+ 11631 ChimerSeq FusionScan TCGA_RNA-Seq GUCA2A-ERG GUCA2A chr1 42629073 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-KC-A4BR 2 Out-of-Frame Inter-chr p34.2 q22.2 Oncogene Transcription factor Seq+ 11632 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-GUCA2A TMPRSS2 chr21 42879876 - GUCA2A chr1 42629281 - Exonic hg19 PRAD TCGA-KC-A4BR 2 Out-of-Frame Inter-chr q22.3 p34.2 Seq+ 11633 ChimerSeq FusionScan TCGA_RNA-Seq CDC42EP3-REEP1 CDC42EP3 chr2 37898568 - REEP1 chr2 86509365 - Exonic hg19 PRAD TCGA-G9-6347 2 5'UTR-CDS Intra-chr p22.2 p11.2 11634 ChimerSeq FusionScan TCGA_RNA-Seq EIF2AK4-BUB1B EIF2AK4 chr15 40309443 + BUB1B chr15 40504699 + Exonic hg19 PRAD TCGA-CH-5771 3 In-Frame Intra-chr q15.1 q15.1 Oncogene Seq+ 11635 ChimerSeq FusionScan TCGA_RNA-Seq OSBPL9-SERINC5 OSBPL9 chr1 52082893 + SERINC5 chr5 79454785 - Exonic hg19 PRAD TCGA-CH-5771 2 Out-of-Frame Inter-chr p32.3 q14.1 Seq+ 11636 ChimerSeq FusionScan TCGA_RNA-Seq SERINC5-CDYL2 SERINC5 chr5 79551714 - CDYL2 chr16 80719026 - Exonic hg19 PRAD TCGA-CH-5771 2 In-Frame Inter-chr q14.1 q23.2 Seq+ 11637 ChimerSeq FusionScan TCGA_RNA-Seq FLJ43663-ORC5 FLJ43663 chr7 130737183 - ORC5 chr7 103808973 - Exonic hg19 PRAD TCGA-J4-A67K 2 3'UTR-CDS Intra-chr q22.2 11638 ChimerSeq FusionScan TCGA_RNA-Seq KLC1-BTK KLC1 chr14 104129264 + BTK chrX 100604944 - Exonic hg19 PRAD TCGA-KK-A59Z 2 Out-of-Frame Inter-chr q32.33 q22.1 TK:Tec Oncogene Tumor suppressor gene 11639 ChimerSeq FusionScan TCGA_RNA-Seq NBPF15-ARID1A NBPF15 chr1 148568877 + ARID1A chr1 27056141 + Exonic hg19 PRAD TCGA-EJ-7782 2 5'UTR-CDS Intra-chr q21.1 p36.11 Oncogene Tumor suppressor gene 11640 ChimerSeq FusionScan TCGA_RNA-Seq CCM2-PEX1 CCM2 chr7 45078025 + PEX1 chr7 92147569 - Exonic hg19 PRAD TCGA-EJ-7782 2 In-Frame Intra-chr p13 q21.2 11641 ChimerSeq FusionScan TCGA_RNA-Seq PKHD1-CAGE1 PKHD1 chr6 51875106 - CAGE1 chr6 7334323 - Exonic hg19 PRAD TCGA-EJ-7782 2 Out-of-Frame Intra-chr p12.2 Oncogene p24.3 Seq+ 11642 ChimerSeq FusionScan TCGA_RNA-Seq NCOR1-CCDC144C NCOR1 chr17 15964714 - CCDC144C chr17 20294787 + Exonic hg19 PRAD TCGA-VP-A876 3 CDS-5'UTR Intra-chr p11.2 Oncogene 11643 ChimerSeq FusionScan TCGA_RNA-Seq NCOR1-CCDC144A NCOR1 chr17 15964714 - CCDC144A chr17 16664738 + Exonic hg19 PRAD TCGA-VP-A876 3 Out-of-Frame Intra-chr p11.2 Oncogene p11.2 Seq+ 11644 ChimerSeq FusionScan TCGA_RNA-Seq RGPD5-TMEM18 RGPD5 chr2 110552114 + TMEM18 chr2 675630 - Exonic hg19 PRAD TCGA-HC-7078 3 In-Frame Intra-chr q13 p25.3 Seq+ 11645 ChimerSeq FusionScan TCGA_RNA-Seq CTPS1-HIVEP3 CTPS1 chr1 41445501 + HIVEP3 chr1 42384195 - Exonic hg19 PRAD TCGA-HC-7078 2 5'UTR-3'UTR Intra-chr p34.2 p34.2 Tumor suppressor gene Transcription factor Seq+ 11646 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-MLLT3 TMPRSS2 chr21 42851098 - MLLT3 chr9 20620833 - Exonic hg19 PRAD TCGA-ZG-A9L1 5 Out-of-Frame Inter-chr q22.3 p21.3 Seq+ 11647 ChimerSeq FusionScan TCGA_RNA-Seq ACTN4-TIMM50 ACTN4 chr19 39138547 + TIMM50 chr19 39978700 + Exonic hg19 PRAD TCGA-ZG-A9L1 3 In-Frame Intra-chr q13.2 Seq+ 11648 ChimerSeq FusionScan TCGA_RNA-Seq ACTN4-TIMM50 ACTN4 chr19 39138547 + TIMM50 chr19 39976327 + Exonic hg19 PRAD TCGA-ZG-A9L1 3 In-Frame Intra-chr q13.2 Seq+ 11649 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649521 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-HC-7821 8 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 11650 ChimerSeq FusionScan TCGA_RNA-Seq RABGAP1-NIPSNAP3A RABGAP1 chr9 125761045 + NIPSNAP3A chr9 107521365 + Exonic hg19 PRAD TCGA-HC-7821 4 Out-of-Frame Intra-chr q33.2 q31.1 11651 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-GRHL2 TMPRSS2 chr21 42861433 - GRHL2 chr8 102564942 + Exonic hg19 PRAD TCGA-EJ-7314 7 Out-of-Frame Inter-chr q22.3 q22.3 Transcription factor Seq+ 11652 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-GRHL2 TMPRSS2 chr21 42860320 - GRHL2 chr8 102564942 + Exonic hg19 PRAD TCGA-EJ-7314 4 Out-of-Frame Inter-chr q22.3 q22.3 Transcription factor Seq+ 11653 ChimerSeq FusionScan TCGA_RNA-Seq BANK1-GSTCD BANK1 chr4 102965064 + GSTCD chr4 106744110 + Exonic hg19 PRAD TCGA-YL-A8S8 3 In-Frame Intra-chr q24 q24 Seq+ 11654 ChimerSeq FusionScan TCGA_RNA-Seq FAM110B-DIABLO FAM110B chr8 58907365 + DIABLO chr12 122702944 - Exonic hg19 PRAD TCGA-EJ-5526 2 5'UTR-CDS Inter-chr q12.1 q24.31 Tumor suppressor gene Seq+ 11655 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF38-GSTCD ARHGEF38 chr4 106575326 + GSTCD chr4 106647735 + Exonic hg19 PRAD TCGA-G9-7525 3 In-Frame Intra-chr q24 q24 11656 ChimerSeq FusionScan TCGA_RNA-Seq NCK2-KDM4C NCK2 chr2 106361595 + KDM4C chr9 7165237 + Exonic hg19 PRAD TCGA-G9-7525 2 5'UTR-CDS Inter-chr q12.2 p24.1 Seq+ 11657 ChimerSeq FusionScan TCGA_RNA-Seq SMAD9-BEND7 SMAD9 chr13 37494252 - BEND7 chr10 13542080 - Exonic hg19 PRAD TCGA-G9-7525 2 5'UTR-5'UTR Inter-chr q13.3 Transcription factor p13 11658 ChimerSeq FusionScan TCGA_RNA-Seq DUSP16-LOH12CR1 DUSP16 chr12 12715050 - LOH12CR1 chr12 12588561 + Exonic hg19 PRAD TCGA-G9-7525 2 5'UTR-CDS Intra-chr Seq+ 11659 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-GUCA2A TMPRSS2 chr21 42880007 - GUCA2A chr1 42629281 - Exonic hg19 PRAD TCGA-KC-A4BR 16 5'UTR-CDS Inter-chr q22.3 p34.2 Seq+ 11660 ChimerSeq FusionScan TCGA_RNA-Seq GUCA2A-ERG GUCA2A chr1 42629073 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-KC-A4BR 2 Out-of-Frame Inter-chr p34.2 q22.2 Oncogene Transcription factor Seq+ 11661 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-GUCA2A TMPRSS2 chr21 42879876 - GUCA2A chr1 42629281 - Exonic hg19 PRAD TCGA-KC-A4BR 2 Out-of-Frame Inter-chr q22.3 p34.2 Seq+ 11662 ChimerSeq FusionScan TCGA_RNA-Seq LNPEP-PPIP5K2 LNPEP chr5 96322374 + PPIP5K2 chr5 102537222 + Exonic hg19 PRAD TCGA-XK-AAJ3 2 Out-of-Frame Intra-chr q15 q21.1 Seq+ 11663 ChimerSeq FusionScan TCGA_RNA-Seq MAP3K10-ALDH16A1 MAP3K10 chr19 40698620 + ALDH16A1 chr19 49971637 + Exonic hg19 PRAD TCGA-ZG-A9LM 3 Out-of-Frame Intra-chr q13.2 q13.33 Seq+ 11664 ChimerSeq FusionScan TCGA_RNA-Seq MAP3K10-ALDH16A1 MAP3K10 chr19 40698620 + ALDH16A1 chr19 49972120 + Exonic hg19 PRAD TCGA-ZG-A9LM 3 Out-of-Frame Intra-chr q13.2 q13.33 Seq+ 11665 ChimerSeq FusionScan TCGA_RNA-Seq TMEFF2-TMPRSS11B TMEFF2 chr2 193044393 - TMPRSS11B chr4 69098134 - Exonic hg19 PRAD TCGA-ZG-A9LM 2 In-Frame Inter-chr q32.3 Tumor suppressor gene q13.2 Seq+ 11666 ChimerSeq FusionScan TCGA_RNA-Seq CCBP2-ZNF662 CCBP2 chr3 42861203 + ZNF662 chr3 42949513 + Exonic hg19 PRAD TCGA-ZG-A9LM 2 5'UTR-5'UTR Intra-chr p22.1 Transcription factor 11667 ChimerSeq FusionScan TCGA_RNA-Seq MAP3K10-ALDH16A1 MAP3K10 chr19 40698620 + ALDH16A1 chr19 49971637 + Exonic hg19 PRAD TCGA-ZG-A9LM 3 Out-of-Frame Intra-chr q13.2 q13.33 Seq+ 11668 ChimerSeq FusionScan TCGA_RNA-Seq MAP3K10-ALDH16A1 MAP3K10 chr19 40698620 + ALDH16A1 chr19 49972120 + Exonic hg19 PRAD TCGA-ZG-A9LM 3 Out-of-Frame Intra-chr q13.2 q13.33 Seq+ 11669 ChimerSeq FusionScan TCGA_RNA-Seq TMEFF2-TMPRSS11B TMEFF2 chr2 193044393 - TMPRSS11B chr4 69098134 - Exonic hg19 PRAD TCGA-ZG-A9LM 2 In-Frame Inter-chr q32.3 Tumor suppressor gene q13.2 Seq+ 11670 ChimerSeq FusionScan TCGA_RNA-Seq CCBP2-ZNF662 CCBP2 chr3 42861203 + ZNF662 chr3 42949513 + Exonic hg19 PRAD TCGA-ZG-A9LM 2 5'UTR-5'UTR Intra-chr p22.1 Transcription factor 11671 ChimerSeq FusionScan TCGA_RNA-Seq SYNCRIP-EPB41L2 SYNCRIP chr6 86333694 - EPB41L2 chr6 131161738 - Exonic hg19 PRAD TCGA-VN-A88Q 2 CDS-3'UTR Intra-chr q14.3 q23.2 11672 ChimerSeq FusionScan TCGA_RNA-Seq PPAP2A-CDC42SE2 PPAP2A chr5 54763696 - CDC42SE2 chr5 130694901 + Exonic hg19 PRAD TCGA-HC-8260 3 CDS-5'UTR Intra-chr q31.1 Seq+ 11673 ChimerSeq FusionScan TCGA_RNA-Seq CRYL1-SNX5 CRYL1 chr13 21006240 - SNX5 chr20 17923839 - Exonic hg19 PRAD TCGA-HC-8260 2 Out-of-Frame Inter-chr q12.11 p11.23 11674 ChimerSeq FusionScan TCGA_RNA-Seq EPC1-ARHGAP12 EPC1 chr10 32635690 - ARHGAP12 chr10 32120728 - Exonic hg19 PRAD TCGA-HC-8260 2 In-Frame Intra-chr p11.22 p11.22 Seq+ 11675 ChimerSeq FusionScan TCGA_RNA-Seq SPTBN1-ECI2 SPTBN1 chr2 54826380 + ECI2 chr6 4133935 - Exonic hg19 PRAD TCGA-KK-A8II 2 CDS-5'UTR Inter-chr p16.2 Tumor suppressor gene p25.2 Seq+ 11676 ChimerSeq FusionScan TCGA_RNA-Seq MAGI1-TBC1D30 MAGI1 chr3 66023670 - TBC1D30 chr12 65221614 + Exonic hg19 PRAD TCGA-KK-A8II 2 In-Frame Inter-chr Oncogene q14.3 Seq+ 11677 ChimerSeq FusionScan TCGA_RNA-Seq ZNF329-ZSCAN18 ZNF329 chr19 58653923 - ZSCAN18 chr19 58601753 - Exonic hg19 PRAD TCGA-EJ-5518 6 5'UTR-5'UTR Intra-chr q13.43 Transcription factor q13.43 Transcription factor 11678 ChimerSeq FusionScan TCGA_RNA-Seq TOR1AIP2-IFI16 TOR1AIP2 chr1 179846373 - IFI16 chr1 159015086 + Exonic hg19 PRAD TCGA-EJ-5518 6 5'UTR-CDS Intra-chr q25.2 q23.1 Tumor suppressor gene Seq+ 11679 ChimerSeq FusionScan TCGA_RNA-Seq MEF2D-APOA2 MEF2D chr1 156470277 - APOA2 chr1 161193215 - Exonic hg19 PRAD TCGA-EJ-5518 4 5'UTR-5'UTR Intra-chr q22 Transcription factor q23.3 Seq+ 11680 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPUL1-SLC8A2 HNRNPUL1 chr19 41787180 + SLC8A2 chr19 47960851 - Exonic hg19 PRAD TCGA-EJ-5518 4 In-Frame Intra-chr q13.2 q13.32 Seq+ 11681 ChimerSeq FusionScan TCGA_RNA-Seq C1orf9-RASAL2 C1orf9 chr1 172502637 + RASAL2 chr1 178359234 + Exonic hg19 PRAD TCGA-EJ-5518 3 Out-of-Frame Intra-chr q25.2 Tumor suppressor gene Seq+ 11682 ChimerSeq FusionScan TCGA_RNA-Seq NOTCH2NL-NUAK2 NOTCH2NL chr1 145209436 + NUAK2 chr1 205280953 - Exonic hg19 PRAD TCGA-EJ-5518 2 5'UTR-CDS Intra-chr q21.1 q32.1 Seq+ 11683 ChimerSeq FusionScan TCGA_RNA-Seq MEF2D-APOA2 MEF2D chr1 156470277 - APOA2 chr1 161192840 - Exonic hg19 PRAD TCGA-EJ-5518 2 5'UTR-CDS Intra-chr q22 Transcription factor q23.3 Seq+ 11684 ChimerSeq FusionScan TCGA_RNA-Seq PIP5K1A-ITLN1 PIP5K1A chr1 151204841 + ITLN1 chr1 160854673 - Exonic hg19 PRAD TCGA-EJ-5518 2 CDS-5'UTR Intra-chr q21.3 q23.3 Seq+ 11685 ChimerSeq FusionScan TCGA_RNA-Seq RASAL2-COPA RASAL2 chr1 178310743 + COPA chr1 160305112 - Exonic hg19 PRAD TCGA-EJ-5518 2 Out-of-Frame Intra-chr q25.2 Tumor suppressor gene q23.2 Seq+ 11686 ChimerSeq FusionScan TCGA_RNA-Seq C1orf9-RASAL2 C1orf9 chr1 172520766 + RASAL2 chr1 178359234 + Exonic hg19 PRAD TCGA-EJ-5518 2 Out-of-Frame Intra-chr q25.2 Tumor suppressor gene Seq+ 11687 ChimerSeq FusionScan TCGA_RNA-Seq CEP350-GPR161 CEP350 chr1 179924277 + GPR161 chr1 168074132 - Exonic hg19 PRAD TCGA-EJ-5518 2 5'UTR-5'UTR Intra-chr q25.2 q24.2 Seq+ 11688 ChimerSeq FusionScan TCGA_RNA-Seq MEF2D-APOA2 MEF2D chr1 156470277 - APOA2 chr1 161192312 - Exonic hg19 PRAD TCGA-EJ-5518 2 5'UTR-CDS Intra-chr q22 Transcription factor q23.3 Seq+ 11689 ChimerSeq FusionScan TCGA_RNA-Seq SESTD1-CERKL SESTD1 chr2 180129225 - CERKL chr2 182412453 - Exonic hg19 PRAD TCGA-HC-8265 2 5'UTR-CDS Intra-chr q31.2 q31.3 11690 ChimerSeq FusionScan TCGA_RNA-Seq SESTD1-CERKL SESTD1 chr2 180129225 - CERKL chr2 182409523 - Exonic hg19 PRAD TCGA-HC-8265 2 5'UTR-CDS Intra-chr q31.2 q31.3 11691 ChimerSeq FusionScan TCGA_RNA-Seq RAB11FIP4-ARHGAP23 RAB11FIP4 chr17 29852248 + ARHGAP23 chr17 36614345 + Exonic hg19 PRAD TCGA-G9-A9S0 2 Out-of-Frame Intra-chr q11.2 q12 Seq+ 11692 ChimerSeq FusionScan TCGA_RNA-Seq LSR-CHMP1A LSR chr19 35749967 + CHMP1A chr16 89713739 - Exonic hg19 PRAD TCGA-G9-A9S0 2 In-Frame Inter-chr q13.12 q24.3 11693 ChimerSeq FusionScan TCGA_RNA-Seq ETV6-PDE6H ETV6 chr12 11803094 + PDE6H chr12 15130905 + Exonic hg19 PRAD TCGA-J4-AATZ 3 CDS-5'UTR Intra-chr p13.2 Tumor suppressor gene Transcription factor p12.3 Seq+ 11694 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB20-LSAMP ZBTB20 chr3 114693212 - LSAMP chr3 115738487 - Exonic hg19 PRAD TCGA-J4-AATZ 2 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.31 Tumor suppressor gene Seq+ 11695 ChimerSeq FusionScan TCGA_RNA-Seq HDLBP-TMC1 HDLBP chr2 242186470 - TMC1 chr9 75445366 + Exonic hg19 PRAD TCGA-HC-A631 7 Out-of-Frame Inter-chr q37.3 q21.13 Seq+ 11696 ChimerSeq FusionScan TCGA_RNA-Seq SF3B3-SLC7A6 SF3B3 chr16 70557831 + SLC7A6 chr16 68328607 + Exonic hg19 PRAD TCGA-HC-A631 2 5'UTR-CDS Intra-chr q22.1 q22.1 11697 ChimerSeq FusionScan TCGA_RNA-Seq DDX17-AARSD1 DDX17 chr22 38889714 - AARSD1 chr17 41109212 - Exonic hg19 PRAD TCGA-HC-A631 2 In-Frame Inter-chr q13.1 q21.31 11698 ChimerSeq FusionScan TCGA_RNA-Seq ZNF716-C7orf72 ZNF716 chr7 57510033 + C7orf72 chr7 50191045 + Exonic hg19 PRAD TCGA-J9-A8CP 3 Out-of-Frame Intra-chr p11.2 Transcription factor p12.2 Seq+ 11699 ChimerSeq FusionScan TCGA_RNA-Seq UHRF1BP1-RIOK1 UHRF1BP1 chr6 34825694 + RIOK1 chr6 7417563 + Exonic hg19 PRAD TCGA-CH-5740 3 In-Frame Intra-chr p21.31 p24.3 Atypical:RIO Seq+ 11700 ChimerSeq FusionScan TCGA_RNA-Seq CPD-PIGW CPD chr17 28706744 + PIGW chr17 34892942 + Exonic hg19 PRAD TCGA-CH-5740 2 CDS-5'UTR Intra-chr q11.2 Tumor suppressor gene q12 Seq+ 11701 ChimerSeq FusionScan TCGA_RNA-Seq THRAP3-RPN1 THRAP3 chr1 36690106 + RPN1 chr3 128363826 - Exonic hg19 PRAD TCGA-CH-5740 2 5'UTR-CDS Inter-chr p34.3 q21.3 Seq+ 11702 ChimerSeq FusionScan TCGA_RNA-Seq SRP54-METTL3 SRP54 chr14 35488280 + METTL3 chr14 21967946 - Exonic hg19 PRAD TCGA-KK-A7B2 2 Out-of-Frame Intra-chr q13.2 q11.2 11703 ChimerSeq FusionScan TCGA_RNA-Seq PDS5B-CRYBB1 PDS5B chr13 33160730 + CRYBB1 chr22 27012302 - Exonic hg19 PRAD TCGA-KK-A8IJ 5 5'UTR-5'UTR Inter-chr q13.1 Tumor suppressor gene q12.1 Seq+ 11704 ChimerSeq FusionScan TCGA_RNA-Seq PDS5B-CRYBB1 PDS5B chr13 33160730 + CRYBB1 chr22 27008154 - Exonic hg19 PRAD TCGA-KK-A8IJ 4 5'UTR-CDS Inter-chr q13.1 Tumor suppressor gene q12.1 Seq+ 11705 ChimerSeq FusionScan TCGA_RNA-Seq CSGALNACT1-TMEM150A CSGALNACT1 chr8 19315936 - TMEM150A chr2 85826825 - Exonic hg19 PRAD TCGA-EJ-A46F 3 Out-of-Frame Inter-chr p21.3 p11.2 Seq+ 11706 ChimerSeq FusionScan TCGA_RNA-Seq CYB561-PHB CYB561 chr17 61523605 - PHB chr17 47482566 - Exonic hg19 PRAD TCGA-J9-A52B 2 5'UTR-CDS Intra-chr q23.3 q21.33 Tumor suppressor gene Seq+ 11707 ChimerSeq FusionScan TCGA_RNA-Seq PDXDC1-SNF8 PDXDC1 chr16 15123913 + SNF8 chr17 47014486 - Exonic hg19 PRAD TCGA-J4-A67R 2 In-Frame Inter-chr p13.11 q21.32 11708 ChimerSeq FusionScan TCGA_RNA-Seq DENND4C-RHOBTB2 DENND4C chr9 19357152 + RHOBTB2 chr8 22861937 + Exonic hg19 PRAD TCGA-EJ-7785 2 In-Frame Inter-chr p22.1 p21.3 Tumor suppressor gene Seq+ 11709 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649521 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-M7-A71Y 4 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 11710 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649521 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-HC-7748 18 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 11711 ChimerSeq FusionScan TCGA_RNA-Seq CTBP2-METTL10 CTBP2 chr10 126727565 - METTL10 chr10 126463351 - Exonic hg19 PRAD TCGA-HC-7748 4 Out-of-Frame Intra-chr q26.13 Seq+ 11712 ChimerSeq FusionScan TCGA_RNA-Seq PSMA1-PBX3 PSMA1 chr11 14665000 - PBX3 chr9 128510828 + Exonic hg19 PRAD TCGA-HC-7748 2 5'UTR-5'UTR Inter-chr p15.2 q33.3 Transcription factor 11713 ChimerSeq FusionScan TCGA_RNA-Seq BAZ2B-LAPTM4A BAZ2B chr2 160472752 - LAPTM4A chr2 20240772 - Exonic hg19 PRAD TCGA-HC-7748 2 5'UTR-CDS Intra-chr q24.2 Transcription factor p24.1 11714 ChimerSeq FusionScan TCGA_RNA-Seq UBE2D3-CA10 UBE2D3 chr4 103747641 - CA10 chr17 49726615 - Exonic hg19 PRAD TCGA-EJ-7781 4 In-Frame Inter-chr q24 q22 Seq+ 11715 ChimerSeq FusionScan TCGA_RNA-Seq GNG4-SH3D19 GNG4 chr1 235813848 - SH3D19 chr4 152086848 - Exonic hg19 PRAD TCGA-EJ-7781 2 5'UTR-CDS Inter-chr q31.3 Seq+ 11716 ChimerSeq FusionScan TCGA_RNA-Seq MBNL1-NMNAT3 MBNL1 chr3 151986881 + NMNAT3 chr3 139297897 - Exonic hg19 PRAD TCGA-EJ-7792 6 5'UTR-5'UTR Intra-chr q25.1 q23 Seq+ 11717 ChimerSeq FusionScan TCGA_RNA-Seq GALNT7-CHIC2 GALNT7 chr4 174169591 + CHIC2 chr4 54915472 - Exonic hg19 PRAD TCGA-EJ-7792 2 In-Frame Intra-chr q34.1 q12 11718 ChimerSeq FusionScan TCGA_RNA-Seq BLCAP-AMACR BLCAP chr20 36156194 - AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-EJ-7792 2 5'UTR-CDS Inter-chr q11.23 Tumor suppressor gene p13.2 11719 ChimerSeq FusionScan TCGA_RNA-Seq BMPR1B-ETV1 BMPR1B chr4 95679219 + ETV1 chr7 14028764 - Exonic hg19 PRAD TCGA-SU-A7E7 2 5'UTR-5'UTR Inter-chr q22.3 TKL:STKR p21.2 Oncogene Transcription factor Seq+ 11720 ChimerSeq FusionScan TCGA_RNA-Seq FZR1-CELF5 FZR1 chr19 3506472 + CELF5 chr19 3293316 + Exonic hg19 PRAD TCGA-XJ-A9DX 4 5'UTR-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 11721 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D23-TMEM45A TBC1D23 chr3 99998604 + TMEM45A chr3 100287665 + Exonic hg19 PRAD TCGA-XJ-A9DX 2 In-Frame Intra-chr q12.1 q12.2 Seq+ 11722 ChimerSeq FusionScan TCGA_RNA-Seq FZR1-CELF5 FZR1 chr19 3506472 + CELF5 chr19 3293316 + Exonic hg19 PRAD TCGA-XJ-A9DX 4 5'UTR-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 11723 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D23-TMEM45A TBC1D23 chr3 99998604 + TMEM45A chr3 100287665 + Exonic hg19 PRAD TCGA-XJ-A9DX 2 In-Frame Intra-chr q12.1 q12.2 Seq+ 11724 ChimerSeq FusionScan TCGA_RNA-Seq SHOC2-TMEM178 SHOC2 chr10 112679415 + TMEM178 chr2 39931220 + Exonic hg19 PRAD TCGA-HC-8262 3 5'UTR-5'UTR Inter-chr q25.2 11725 ChimerSeq FusionScan TCGA_RNA-Seq GPBP1-MTRR GPBP1 chr5 56527148 + MTRR chr5 7889207 + Exonic hg19 PRAD TCGA-EJ-7327 4 In-Frame Intra-chr q11.2 Transcription factor p15.31 Oncogene Seq+ 11726 ChimerSeq FusionScan TCGA_RNA-Seq NEO1-DPP8 NEO1 chr15 73345146 + DPP8 chr15 65766626 - Exonic hg19 PRAD TCGA-EJ-7327 3 In-Frame Intra-chr q24.1 q22.31 11727 ChimerSeq FusionScan TCGA_RNA-Seq C17orf62-CCDC159 C17orf62 chr17 80408575 - CCDC159 chr19 11464467 + Exonic hg19 PRAD TCGA-EJ-7327 2 5'UTR-CDS Inter-chr q25.3 p13.2 11728 ChimerSeq FusionScan TCGA_RNA-Seq GPBP1-MTRR GPBP1 chr5 56527148 + MTRR chr5 7870882 + Exonic hg19 PRAD TCGA-EJ-7327 2 Out-of-Frame Intra-chr q11.2 Transcription factor p15.31 Oncogene Seq+ 11729 ChimerSeq FusionScan TCGA_RNA-Seq RUFY1-TARP RUFY1 chr5 178977880 + TARP chr7 38301819 - Exonic hg19 PRAD TCGA-EJ-7327 2 In-Frame Inter-chr 11730 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-AMACR RCC1 chr1 28834672 + AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-G9-6343 2 5'UTR-CDS Inter-chr p35.3 p13.2 11731 ChimerSeq FusionScan TCGA_RNA-Seq UBE2D3-CA10 UBE2D3 chr4 103747641 - CA10 chr17 49726615 - Exonic hg19 PRAD TCGA-EJ-7781 4 In-Frame Inter-chr q24 q22 Seq+ 11732 ChimerSeq FusionScan TCGA_RNA-Seq GNG4-SH3D19 GNG4 chr1 235813848 - SH3D19 chr4 152086848 - Exonic hg19 PRAD TCGA-EJ-7781 2 5'UTR-CDS Inter-chr q31.3 Seq+ 11733 ChimerSeq FusionScan TCGA_RNA-Seq CSPP1-CPA6 CSPP1 chr8 67976731 + CPA6 chr8 68346475 - Exonic hg19 PRAD TCGA-YL-A9WY 3 Out-of-Frame Intra-chr q13.1 q13.2 Seq+ 11734 ChimerSeq FusionScan TCGA_RNA-Seq NCALD-PAXIP1 NCALD chr8 102928036 - PAXIP1 chr7 154759620 - Exonic hg19 PRAD TCGA-YL-A9WY 2 5'UTR-CDS Inter-chr q22.3 q36.2 11735 ChimerSeq FusionScan TCGA_RNA-Seq USP6NL-ANKRD16 USP6NL chr10 11639629 - ANKRD16 chr10 5922339 - Exonic hg19 PRAD TCGA-YL-A9WY 2 Out-of-Frame Intra-chr p14 p15.1 Seq+ 11736 ChimerSeq FusionScan TCGA_RNA-Seq EPHA6-CNTN6 EPHA6 chr3 96585733 + CNTN6 chr3 1443116 + Exonic hg19 PRAD TCGA-KK-A59X 2 Out-of-Frame Intra-chr q11.2 p26.3 Seq+ 11737 ChimerSeq FusionScan TCGA_RNA-Seq KLHL2-GALNTL6 KLHL2 chr4 166141211 + GALNTL6 chr4 173852311 + Exonic hg19 PRAD TCGA-EJ-5498 2 Out-of-Frame Intra-chr q32.3 q34.1 Seq+ 11738 ChimerSeq FusionScan TCGA_RNA-Seq SNHG4-KDM3B SNHG4 chr5 138614097 + KDM3B chr5 137726701 + Exonic hg19 PRAD TCGA-EJ-5515 2 5'UTR-CDS Intra-chr q31.2 q31.2 Tumor suppressor gene Seq+ 11739 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649521 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-J4-A83N 7 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 11740 ChimerSeq FusionScan TCGA_RNA-Seq ANTXR2-GDEP ANTXR2 chr4 80952776 - GDEP chr4 80782443 + Exonic hg19 PRAD TCGA-EJ-7312 2 CDS-5'UTR Intra-chr q21.21 Seq+ 11741 ChimerSeq FusionScan TCGA_RNA-Seq NAP1L4-ATP11B NAP1L4 chr11 2985909 - ATP11B chr3 182631648 + Exonic hg19 PRAD TCGA-FC-A4JI 5 In-Frame Inter-chr q26.33 Oncogene Seq+ 11742 ChimerSeq FusionScan TCGA_RNA-Seq CAPZA2-C3orf26 CAPZA2 chr7 116528244 + C3orf26 chr3 99865816 + Exonic hg19 PRAD TCGA-FC-A4JI 2 In-Frame Inter-chr q31.2 Seq+ 11743 ChimerSeq FusionScan TCGA_RNA-Seq NCOA2-EIF4EBP1 NCOA2 chr8 71315934 - EIF4EBP1 chr8 37914598 + Exonic hg19 PRAD TCGA-FC-A4JI 2 5'UTR-CDS Intra-chr q13.3 Oncogene Transcription factor p11.23 Seq+ 11744 ChimerSeq FusionScan TCGA_RNA-Seq ZNF292-C6orf162 ZNF292 chr6 87865477 + C6orf162 chr6 88046726 + Exonic hg19 PRAD TCGA-EJ-A65G 2 CDS-5'UTR Intra-chr q14.3 Tumor suppressor gene Transcription factor 11745 ChimerSeq FusionScan TCGA_RNA-Seq FAM210A-PSMG2 FAM210A chr18 13726327 - PSMG2 chr18 12712700 + Exonic hg19 PRAD TCGA-ZG-A9L2 2 5'UTR-CDS Intra-chr p11.21 p11.21 Seq+ 11746 ChimerSeq FusionScan TCGA_RNA-Seq PDE9A-TMPRSS2 PDE9A chr21 44153536 + TMPRSS2 chr21 42870116 - Exonic hg19 PRAD TCGA-ZG-A9L2 2 In-Frame Intra-chr q22.3 q22.3 Seq+ 11747 ChimerSeq FusionScan TCGA_RNA-Seq NDUFS3-ERO1LB NDUFS3 chr11 47604020 + ERO1LB chr1 236381876 - Exonic hg19 PRAD TCGA-EJ-5527 4 Out-of-Frame Inter-chr p11.2 Seq+ 11748 ChimerSeq FusionScan TCGA_RNA-Seq NOTCH2NL-PDE4DIP NOTCH2NL chr1 145248894 + PDE4DIP chr1 145021167 - Exonic hg19 PRAD TCGA-EJ-5527 2 In-Frame Intra-chr q21.1 q21.2 Oncogene 11749 ChimerSeq FusionScan TCGA_RNA-Seq UBQLN4-AHCYL1 UBQLN4 chr1 156011275 - AHCYL1 chr1 110551655 + Exonic hg19 PRAD TCGA-VP-A87K 2 In-Frame Intra-chr q22 p13.3 Tumor suppressor gene Seq+ 11750 ChimerSeq FusionScan TCGA_RNA-Seq PRR15L-RAB5C PRR15L chr17 46035022 - RAB5C chr17 40282608 - Exonic hg19 PRAD TCGA-G9-6348 3 5'UTR-5'UTR Intra-chr q21.32 q21.2 Seq+ 11751 ChimerSeq FusionScan TCGA_RNA-Seq PRR15L-KCNH4 PRR15L chr17 46035022 - KCNH4 chr17 40309136 - Exonic hg19 PRAD TCGA-G9-6348 3 5'UTR-3'UTR Intra-chr q21.32 q21.2 Seq+ 11752 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-NUP93 CPSF6 chr12 69656342 + NUP93 chr16 56839415 + Exonic hg19 PRAD TCGA-G9-6348 2 3'UTR-CDS Inter-chr q15 q13 11753 ChimerSeq FusionScan TCGA_RNA-Seq CCAR1-AMACR CCAR1 chr10 70532856 + AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-G9-6348 2 In-Frame Inter-chr q21.3 Tumor suppressor gene p13.2 11754 ChimerSeq FusionScan TCGA_RNA-Seq FAM217B-CDH12 FAM217B chr20 58517567 + CDH12 chr5 21975494 - Exonic hg19 PRAD TCGA-G9-6348 2 5'UTR-CDS Inter-chr q13.33 p14.3 Seq+ 11755 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649521 - ETV1 chr7 14017105 - Exonic hg19 PRAD TCGA-J4-A83M 4 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 11756 ChimerSeq FusionScan TCGA_RNA-Seq ZNF716-C7orf72 ZNF716 chr7 57510033 + C7orf72 chr7 50191045 + Exonic hg19 PRAD TCGA-J9-A8CP 3 Out-of-Frame Intra-chr p11.2 Transcription factor p12.2 Seq+ 11757 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-TNFRSF19 PVT1 chr8 128903244 + TNFRSF19 chr13 24242118 + Exonic hg19 PRAD TCGA-ZG-A8QW 2 5'UTR-CDS Inter-chr q24.21 q12.12 Seq+ 11758 ChimerSeq FusionScan TCGA_RNA-Seq PTEN-LIPJ PTEN chr10 89690846 + LIPJ chr10 90362332 + Exonic hg19 PRAD TCGA-KK-A7B1 2 Out-of-Frame Intra-chr q23.31 Oncogene Tumor suppressor gene q23.31 KB Seq+ 11759 ChimerSeq FusionScan TCGA_RNA-Seq JARID2-ARHGAP39 JARID2 chr6 15374483 + ARHGAP39 chr8 145831080 - Exonic hg19 PRAD TCGA-G9-6356 2 CDS-5'UTR Inter-chr p22.3 q24.3 11760 ChimerSeq FusionScan TCGA_RNA-Seq GPATCH8-KRT25 GPATCH8 chr17 42512432 - KRT25 chr17 38904638 - Exonic hg19 PRAD TCGA-G9-6356 2 Out-of-Frame Intra-chr q21.31 q21.2 Seq+ 11761 ChimerSeq FusionScan TCGA_RNA-Seq VAV2-COL27A1 VAV2 chr9 136804224 - COL27A1 chr9 117047003 + Exonic hg19 PRAD TCGA-XQ-A8TA 5 In-Frame Intra-chr q34.2 q32 Seq+ 11762 ChimerSeq FusionScan TCGA_RNA-Seq CDC14B-AUH CDC14B chr9 99381500 - AUH chr9 94060358 - Exonic hg19 PRAD TCGA-XQ-A8TA 4 In-Frame Intra-chr q22.33 q22.31 Seq+ 11763 ChimerSeq FusionScan TCGA_RNA-Seq TMEM8A-CSDA TMEM8A chr16 431700 - CSDA chr12 10856747 - Exonic hg19 PRAD TCGA-XQ-A8TA 3 Out-of-Frame Inter-chr p13.3 Seq+ 11764 ChimerSeq FusionScan TCGA_RNA-Seq PTPRG-FHIT PTPRG chr3 61734656 + FHIT chr3 60522712 - Exonic hg19 PRAD TCGA-XQ-A8TA 2 CDS-5'UTR Intra-chr p14.2 p14.2 Tumor suppressor gene Seq+ 11765 ChimerSeq FusionScan TCGA_RNA-Seq RGS3-ABCA1 RGS3 chr9 116226161 + ABCA1 chr9 107602800 - Exonic hg19 PRAD TCGA-XQ-A8TA 2 Out-of-Frame Intra-chr q32 q31.1 Seq+ 11766 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 PRAD TCGA-XQ-A8TA 2 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 11767 ChimerSeq FusionScan TCGA_RNA-Seq CSDA-TMEM8A CSDA chr12 10862506 - TMEM8A chr16 427848 - Exonic hg19 PRAD TCGA-XQ-A8TA 2 Out-of-Frame Inter-chr p13.3 Seq+ 11768 ChimerSeq FusionScan TCGA_RNA-Seq EYA2-C20orf43 EYA2 chr20 45523626 + C20orf43 chr20 55088370 + Exonic hg19 PRAD TCGA-KK-A7AV 2 5'UTR-CDS Intra-chr q13.12 11769 ChimerSeq FusionScan TCGA_RNA-Seq ZNF292-EYS ZNF292 chr6 87865477 + EYS chr6 66205886 - Exonic hg19 PRAD TCGA-YL-A8SR 3 CDS-5'UTR Intra-chr q14.3 Tumor suppressor gene Transcription factor q12 Seq+ 11770 ChimerSeq FusionScan TCGA_RNA-Seq RBM47-IDO2 RBM47 chr4 40546438 - IDO2 chr8 39821126 + Exonic hg19 PRAD TCGA-YL-A8SR 2 5'UTR-CDS Inter-chr p14 p11.21 Seq+ 11771 ChimerSeq FusionScan TCGA_RNA-Seq DCUN1D1-SLC22A1 DCUN1D1 chr3 182698274 - SLC22A1 chr6 160575829 + Exonic hg19 PRAD TCGA-HC-A76X 3 Out-of-Frame Inter-chr q26.33 Oncogene q25.3 Seq+ 11772 ChimerSeq FusionScan TCGA_RNA-Seq DCUN1D1-SLC22A1 DCUN1D1 chr3 182698274 - SLC22A1 chr6 160579547 + Exonic hg19 PRAD TCGA-HC-A76X 2 In-Frame Inter-chr q26.33 Oncogene q25.3 Seq+ 11773 ChimerSeq FusionScan TCGA_RNA-Seq NFIX-CAPN12 NFIX chr19 13192669 + CAPN12 chr19 39233168 - Exonic hg19 PRAD TCGA-HC-A4ZV 7 Out-of-Frame Intra-chr p13.13 Transcription factor q13.2 Seq+ 11774 ChimerSeq FusionScan TCGA_RNA-Seq NFIX-CAPN12 NFIX chr19 13192669 + CAPN12 chr19 39233742 - Exonic hg19 PRAD TCGA-HC-A4ZV 3 In-Frame Intra-chr p13.13 Transcription factor q13.2 Seq+ 11775 ChimerSeq FusionScan TCGA_RNA-Seq NUDT22-RRP7A NUDT22 chr11 63997043 + RRP7A chr22 42914153 - Exonic hg19 PRAD TCGA-HC-A4ZV 2 Out-of-Frame Inter-chr q13.1 q13.2 11776 ChimerSeq FusionScan TCGA_RNA-Seq ACPP-ZNF462 ACPP chr3 132036420 + ZNF462 chr9 109685634 + Exonic hg19 PRAD TCGA-WW-A8ZI 3 5'UTR-5'UTR Inter-chr q22.1 q31.2 Transcription factor Seq+ 11777 ChimerSeq FusionScan TCGA_RNA-Seq LEO1-FBN1 LEO1 chr15 52263884 - FBN1 chr15 48830005 - Exonic hg19 PRAD TCGA-EJ-7783 2 In-Frame Intra-chr q21.2 q21.1 Seq+ 11778 ChimerSeq FusionScan TCGA_RNA-Seq PHF11-SEP15 PHF11 chr13 50070231 + 2019_ 9_ 15_ chr1 87369131 - Exonic hg19 PRAD TCGA-EJ-7783 2 Out-of-Frame Inter-chr q14.2 11779 ChimerSeq FusionScan TCGA_RNA-Seq DIAPH3-DOK5 DIAPH3 chr13 60582677 - DOK5 chr20 53266953 + Exonic hg19 PRAD TCGA-KK-A59V 2 Out-of-Frame Inter-chr q21.2 q13.2 11780 ChimerSeq FusionScan TCGA_RNA-Seq SLC19A1-SNX4 SLC19A1 chr21 46957684 - SNX4 chr3 125195600 - Exonic hg19 PRAD TCGA-KK-A59V 2 In-Frame Inter-chr q22.3 q21.2 11781 ChimerSeq FusionScan TCGA_RNA-Seq LEPROT-SGIP1 LEPROT chr1 65886423 + SGIP1 chr1 67184976 + Exonic hg19 PRAD TCGA-HC-7737 2 In-Frame Intra-chr p31.3 p31.3 Seq+ 11782 ChimerSeq FusionScan TCGA_RNA-Seq SPAST-MEMO1 SPAST chr2 32314674 + MEMO1 chr2 32168452 - Exonic hg19 PRAD TCGA-HC-7737 2 In-Frame Intra-chr p22.3 p22.3 Seq+ 11783 ChimerSeq FusionScan TCGA_RNA-Seq KDM4B-ASTN2 KDM4B chr19 4969241 + ASTN2 chr9 119382722 - Exonic hg19 PRAD TCGA-G9-A9S7 4 5'UTR-CDS Inter-chr p13.3 q33.1 Seq+ 11784 ChimerSeq FusionScan TCGA_RNA-Seq DIS3L2-DNM1 DIS3L2 chr2 233128150 + DNM1 chr9 130996299 + Exonic hg19 PRAD TCGA-G9-A9S7 3 Out-of-Frame Inter-chr q37.1 q34.11 Seq+ 11785 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV5 TMPRSS2 chr21 42880007 - ETV5 chr3 185823731 - Exonic hg19 PRAD TCGA-ZG-A9L5 8 5'UTR-5'UTR Inter-chr q22.3 q27.2 Oncogene Transcription factor KB Pub Seq+ 11786 ChimerSeq FusionScan TCGA_RNA-Seq TRIM35-AMACR TRIM35 chr8 27168317 - AMACR chr5 33989607 - Exonic hg19 PRAD TCGA-ZG-A9L5 6 Out-of-Frame Inter-chr p21.2 Tumor suppressor gene p13.2 Seq+ 11787 ChimerSeq FusionScan TCGA_RNA-Seq MYO1E-C9orf3 MYO1E chr15 59548482 - C9orf3 chr9 97822975 + Exonic hg19 PRAD TCGA-ZG-A9L5 5 Out-of-Frame Inter-chr q22.2 q22.32 Seq+ 11788 ChimerSeq FusionScan TCGA_RNA-Seq KLK2-ORMDL2 KLK2 chr19 51376775 + ORMDL2 chr12 56211805 + Exonic hg19 PRAD TCGA-ZG-A9L5 5 5'UTR-5'UTR Inter-chr q13.33 q13.2 Seq+ 11789 ChimerSeq FusionScan TCGA_RNA-Seq ZNF528-SARNP ZNF528 chr19 52909286 + SARNP chr12 56197512 - Exonic hg19 PRAD TCGA-ZG-A9L5 3 Out-of-Frame Inter-chr q13.41 Transcription factor q13.2 11790 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV5 TMPRSS2 chr21 42870045 - ETV5 chr3 185823731 - Exonic hg19 PRAD TCGA-ZG-A9L5 3 CDS-5'UTR Inter-chr q22.3 q27.2 Oncogene Transcription factor KB Pub Seq+ 11791 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV5 TMPRSS2 chr21 42866282 - ETV5 chr3 185823731 - Exonic hg19 PRAD TCGA-ZG-A9L5 3 CDS-5'UTR Inter-chr q22.3 q27.2 Oncogene Transcription factor KB Pub Seq+ 11792 ChimerSeq FusionScan TCGA_RNA-Seq TSC22D1-NUFIP1 TSC22D1 chr13 45147298 - NUFIP1 chr13 45540071 - Exonic hg19 PRAD TCGA-KK-A6E2 2 In-Frame Intra-chr q14.11 Tumor suppressor gene Transcription factor q14.12 Seq+ 11793 ChimerSeq FusionScan TCGA_RNA-Seq GSR-RBPMS GSR chr8 30585046 - RBPMS chr8 30416403 + Exonic hg19 PRAD TCGA-EJ-5521 4 In-Frame Intra-chr p12 p12 Seq+ 11794 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1-RNF4 WHSC1 chr4 1873269 + RNF4 chr4 2492063 + Exonic hg19 PRAD TCGA-EJ-5521 2 5'UTR-5'UTR Intra-chr Oncogene p16.3 Seq+ 11795 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649521 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-HC-A8CY 5 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 11796 ChimerSeq FusionScan TCGA_RNA-Seq PTPRM-MC2R PTPRM chr18 7774269 + MC2R chr18 13885645 - Exonic hg19 PRAD TCGA-HC-A8CY 2 CDS-5'UTR Intra-chr p11.23 p11.21 Seq+ 11797 ChimerSeq FusionScan TCGA_RNA-Seq DOPEY2-BRI3 DOPEY2 chr21 37537169 + BRI3 chr7 97911662 + Exonic hg19 PRAD TCGA-YL-A9WH 2 Out-of-Frame Inter-chr q22.12 q21.3 11798 ChimerSeq FusionScan TCGA_RNA-Seq C17orf62-NARF C17orf62 chr17 80408575 - NARF chr17 80445791 + Exonic hg19 PRAD TCGA-EJ-7115 2 5'UTR-CDS Intra-chr q25.3 q25.3 Seq+ 11799 ChimerSeq FusionScan TCGA_RNA-Seq RPL5-HSD17B4 RPL5 chr1 93297674 + HSD17B4 chr5 118842512 + Exonic hg19 PRAD TCGA-EJ-7115 2 Out-of-Frame Inter-chr p22.1 Tumor suppressor gene q23.1 11800 ChimerSeq FusionScan TCGA_RNA-Seq RRAS2-FHIT RRAS2 chr11 14380308 - FHIT chr3 59908140 - Exonic hg19 PRAD TCGA-KK-A7B3 6 In-Frame Inter-chr p15.2 p14.2 Tumor suppressor gene Seq+ 11801 ChimerSeq FusionScan TCGA_RNA-Seq RRAS2-FHIT RRAS2 chr11 14380308 - FHIT chr3 59738047 - Exonic hg19 PRAD TCGA-KK-A7B3 6 In-Frame Inter-chr p15.2 p14.2 Tumor suppressor gene Seq+ 11802 ChimerSeq FusionScan TCGA_RNA-Seq PEX14-HMOX2 PEX14 chr1 10596354 + HMOX2 chr16 4555484 + Exonic hg19 PRAD TCGA-CH-5768 5 CDS-5'UTR Inter-chr p36.22 p13.3 Seq+ 11803 ChimerSeq FusionScan TCGA_RNA-Seq TUSC3-LOXL2 TUSC3 chr8 15601121 + LOXL2 chr8 23225947 - Exonic hg19 PRAD TCGA-HC-7210 3 CDS-5'UTR Intra-chr p22 p21.3 Seq+ 11804 ChimerSeq FusionScan TCGA_RNA-Seq NFIC-CELF5 NFIC chr19 3359683 + CELF5 chr19 3273869 + Exonic hg19 PRAD TCGA-ZG-A8QY 3 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 11805 ChimerSeq FusionScan TCGA_RNA-Seq NFIC-CELF5 NFIC chr19 3366664 + CELF5 chr19 3273869 + Exonic hg19 PRAD TCGA-ZG-A8QY 3 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 11806 ChimerSeq FusionScan TCGA_RNA-Seq CYB561D2-ERC2 CYB561D2 chr3 50388415 + ERC2 chr3 56053059 - Exonic hg19 PRAD TCGA-ZG-A8QY 3 5'UTR-CDS Intra-chr p21.31 Tumor suppressor gene p14.3 Seq+ 11807 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649521 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-G9-6351 5 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 11808 ChimerSeq FusionScan TCGA_RNA-Seq NINL-NAA20 NINL chr20 25507043 - NAA20 chr20 20007427 + Exonic hg19 PRAD TCGA-G9-6351 3 Out-of-Frame Intra-chr p11.21 p11.23 Seq+ 11809 ChimerSeq FusionScan TCGA_RNA-Seq SCARB1-SUB1 SCARB1 chr12 125348140 - SUB1 chr5 32599066 + Exonic hg19 PRAD TCGA-KK-A7AU 2 In-Frame Inter-chr q24.31 p13.3 Seq+ 11810 ChimerSeq FusionScan TCGA_RNA-Seq DSTN-DTD1 DSTN chr20 17550856 + DTD1 chr20 18724743 + Exonic hg19 PRAD TCGA-KK-A7AU 2 In-Frame Intra-chr p12.1 p11.23 Seq+ 11811 ChimerSeq FusionScan TCGA_RNA-Seq MATR3-GNAI3 MATR3 chr5 138629494 + GNAI3 chr1 110116358 + Exonic hg19 PRAD TCGA-CH-5746 2 5'UTR-CDS Inter-chr q31.2 p13.3 11812 ChimerSeq FusionScan TCGA_RNA-Seq NUCB1-BAX NUCB1 chr19 49404188 + BAX chr19 49464066 + Exonic hg19 PRAD TCGA-HC-A76W 7 In-Frame Intra-chr q13.33 q13.33 Tumor suppressor gene 11813 ChimerSeq FusionScan TCGA_RNA-Seq NDRG1-MYC NDRG1 chr8 134292474 - MYC chr8 128750493 + Exonic hg19 PRAD TCGA-XK-AAIV 3 In-Frame Intra-chr q24.22 Tumor suppressor gene q24.21 Oncogene Transcription factor Seq+ 11814 ChimerSeq FusionScan TCGA_RNA-Seq RBM47-LEF1 RBM47 chr4 40631412 - LEF1 chr4 108969907 - Exonic hg19 PRAD TCGA-XK-AAIV 2 5'UTR-CDS Intra-chr p14 q25 Transcription factor Seq+ 11815 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD22-MSMB ANKRD22 chr10 90585794 - MSMB chr10 51555730 + Exonic hg19 PRAD TCGA-XK-AAIV 2 In-Frame Intra-chr q23.31 q11.22 Tumor suppressor gene Seq+ 11816 ChimerSeq FusionScan TCGA_RNA-Seq FRMD8-PSMD9 FRMD8 chr11 65172539 + PSMD9 chr12 122353761 + Exonic hg19 PRAD TCGA-XK-AAIV 2 Out-of-Frame Inter-chr q13.1 q24.31 Seq+ 11817 ChimerSeq FusionScan TCGA_RNA-Seq FAM168B-ANKRD42 FAM168B chr2 131840149 - ANKRD42 chr11 82935896 + Exonic hg19 PRAD TCGA-XK-AAIV 2 In-Frame Inter-chr q21.1 q14.1 Seq+ 11818 ChimerSeq FusionScan TCGA_RNA-Seq MAT2B-SFXN1 MAT2B chr5 162932755 + SFXN1 chr5 174919097 + Exonic hg19 PRAD TCGA-XK-AAIV 2 CDS-5'UTR Intra-chr q34 q35.2 Seq+ 11819 ChimerSeq FusionScan TCGA_RNA-Seq HSF1-MICALL1 HSF1 chr8 145515556 + MICALL1 chr22 38307958 + Exonic hg19 PRAD TCGA-XK-AAIV 2 Out-of-Frame Inter-chr q24.3 Transcription factor q13.1 Seq+ 11820 ChimerSeq FusionScan TCGA_RNA-Seq EPN2-SLC5A10 EPN2 chr17 19140844 + SLC5A10 chr17 18916722 + Exonic hg19 PRAD TCGA-KK-A5A1 2 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 11821 ChimerSeq FusionScan TCGA_RNA-Seq MYRIP-MLH1 MYRIP chr3 39942417 + MLH1 chr3 37090394 + Exonic hg19 PRAD TCGA-KK-A5A1 2 Out-of-Frame Intra-chr p22.1 p22.2 Oncogene Tumor suppressor gene Seq+ 11822 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649521 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-2A-A8W3 6 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 11823 ChimerSeq FusionScan TCGA_RNA-Seq COLEC12-AMACR COLEC12 chr18 480706 - AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-2A-A8W3 2 In-Frame Inter-chr p11.32 p13.2 11824 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42880007 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-YL-A8SC 14 5'UTR-CDS Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 11825 ChimerSeq FusionScan TCGA_RNA-Seq NBR1-C17orf104 NBR1 chr17 41345655 + C17orf104 chr17 42751343 + Exonic hg19 PRAD TCGA-YL-A8SC 4 Out-of-Frame Intra-chr q21.31 Seq+ 11826 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42880007 - ETV1 chr7 13971374 - Exonic hg19 PRAD TCGA-YL-A8SC 2 5'UTR-CDS Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 11827 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42879876 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-YL-A8SC 2 In-Frame Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 11828 ChimerSeq FusionScan TCGA_RNA-Seq MATR3-AMACR MATR3 chr5 138629494 + AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-YL-A8SC 2 5'UTR-CDS Intra-chr q31.2 p13.2 11829 ChimerSeq FusionScan TCGA_RNA-Seq PHF12-KIAA0100 PHF12 chr17 27277082 - KIAA0100 chr17 26971205 - Exonic hg19 PRAD TCGA-YL-A8SC 2 In-Frame Intra-chr q11.2 q11.2 Seq+ 11830 ChimerSeq FusionScan TCGA_RNA-Seq SLC30A4-AMACR SLC30A4 chr15 45814161 - AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-YL-A8SC 2 In-Frame Inter-chr q21.1 p13.2 11831 ChimerSeq FusionScan TCGA_RNA-Seq TTC21B-SLC38A11 TTC21B chr2 166810194 - SLC38A11 chr2 165802237 - Exonic hg19 PRAD TCGA-HC-7744 4 Out-of-Frame Intra-chr q24.3 q24.3 Seq+ 11832 ChimerSeq FusionScan TCGA_RNA-Seq PRCC-C8orf80 PRCC chr1 156738031 + C8orf80 chr8 27913571 - Exonic hg19 PRAD TCGA-HC-7744 3 In-Frame Inter-chr q23.1 11833 ChimerSeq FusionScan TCGA_RNA-Seq C8orf44-FAM192A C8orf44 chr8 67579936 + FAM192A chr16 57207781 - Exonic hg19 PRAD TCGA-HC-7744 2 5'UTR-5'UTR Inter-chr q13.1 q13 11834 ChimerSeq FusionScan TCGA_RNA-Seq ZNF618-PARP4 ZNF618 chr9 116638693 + PARP4 chr13 25027792 - Exonic hg19 PRAD TCGA-HC-7744 2 Out-of-Frame Inter-chr q32 Transcription factor q12.12 Seq+ 11835 ChimerSeq FusionScan TCGA_RNA-Seq CDYL2-VEPH1 CDYL2 chr16 80838046 - VEPH1 chr3 157082301 - Exonic hg19 PRAD TCGA-HC-7744 2 Out-of-Frame Inter-chr q23.2 q25.32 Seq+ 11836 ChimerSeq FusionScan TCGA_RNA-Seq ACPP-SAFB2 ACPP chr3 132036420 + SAFB2 chr19 5616346 - Exonic hg19 PRAD TCGA-HC-7233 6 In-Frame Inter-chr q22.1 p13.3 Tumor suppressor gene Transcription factor Seq+ 11837 ChimerSeq FusionScan TCGA_RNA-Seq EBPL-MIPEP EBPL chr13 50265389 - MIPEP chr13 24334356 - Exonic hg19 PRAD TCGA-HC-7233 2 In-Frame Intra-chr q14.2 q12.12 Seq+ 11838 ChimerSeq FusionScan TCGA_RNA-Seq TXNDC16-ARG2 TXNDC16 chr14 53009088 - ARG2 chr14 68108902 + Exonic hg19 PRAD TCGA-HC-7233 2 CDS-5'UTR Intra-chr q22.1 q24.1 Seq+ 11839 ChimerSeq FusionScan TCGA_RNA-Seq ACSL3-SGPP2 ACSL3 chr2 223725976 + SGPP2 chr2 223386485 + Exonic hg19 PRAD TCGA-CH-5751 4 5'UTR-CDS Intra-chr q36.1 q36.1 Seq+ 11840 ChimerSeq FusionScan TCGA_RNA-Seq TCF3-MEX3D TCF3 chr19 1615283 - MEX3D chr19 1556922 - Exonic hg19 PRAD TCGA-CH-5751 3 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p13.3 11841 ChimerSeq FusionScan TCGA_RNA-Seq RPL23-BRD2 RPL23 chr17 37008856 - BRD2 chr6 32939371 + Exonic hg19 PRAD TCGA-CH-5751 2 CDS-3'UTR Inter-chr q12 Atypical:BRD Seq+ 11842 ChimerSeq FusionScan TCGA_RNA-Seq GNAQ-VEPH1 GNAQ chr9 80409378 - VEPH1 chr3 156983451 - Exonic hg19 PRAD TCGA-CH-5751 2 Out-of-Frame Inter-chr q21.2 Oncogene q25.32 Seq+ 11843 ChimerSeq FusionScan TCGA_RNA-Seq TRIM33-CSDE1 TRIM33 chr1 114945381 - CSDE1 chr1 115282511 - Exonic hg19 PRAD TCGA-CH-5751 2 In-Frame Intra-chr p13.2 Oncogene p13.2 Seq+ 11844 ChimerSeq FusionScan TCGA_RNA-Seq SEC23B-CSRP2BP SEC23B chr20 18496380 + CSRP2BP chr20 18162353 + Exonic hg19 PRAD TCGA-CH-5751 2 In-Frame Intra-chr p11.23 Seq+ 11845 ChimerSeq FusionScan TCGA_RNA-Seq CSGALNACT1-TMEM150A CSGALNACT1 chr8 19315936 - TMEM150A chr2 85826825 - Exonic hg19 PRAD TCGA-EJ-A46F 3 Out-of-Frame Inter-chr p21.3 p11.2 Seq+ 11846 ChimerSeq FusionScan TCGA_RNA-Seq BMPR1B-ETV1 BMPR1B chr4 95679219 + ETV1 chr7 14028764 - Exonic hg19 PRAD TCGA-SU-A7E7 2 5'UTR-5'UTR Inter-chr q22.3 TKL:STKR p21.2 Oncogene Transcription factor Seq+ 11847 ChimerSeq FusionScan TCGA_RNA-Seq INTS7-DTL INTS7 chr1 212208685 - DTL chr1 212236225 + Exonic hg19 PRAD TCGA-CH-5752 2 In-Frame Intra-chr q32.3 q32.3 Seq+ 11848 ChimerSeq FusionScan TCGA_RNA-Seq NET1-ACSM3 NET1 chr10 5471192 + ACSM3 chr16 20807691 + Exonic hg19 PRAD TCGA-CH-5752 2 In-Frame Inter-chr p15.1 p12.3 Seq+ 11849 ChimerSeq FusionScan TCGA_RNA-Seq DTL-INTS7 DTL chr1 212220759 + INTS7 chr1 212194554 - Exonic hg19 PRAD TCGA-CH-5752 2 In-Frame Intra-chr q32.3 q32.3 Seq+ 11850 ChimerSeq FusionScan TCGA_RNA-Seq UPF3B-TRPM4 UPF3B chrX 118979160 - TRPM4 chr19 49705220 + Exonic hg19 PRAD TCGA-CH-5767 2 In-Frame Inter-chr q24 q13.33 11851 ChimerSeq FusionScan TCGA_RNA-Seq AZIN1-ZFPM2 AZIN1 chr8 103862226 - ZFPM2 chr8 106456507 + Exonic hg19 PRAD TCGA-CH-5767 2 5'UTR-CDS Intra-chr q22.3 q22.3 Transcription factor Seq+ 11852 ChimerSeq FusionScan TCGA_RNA-Seq EZR-SNX9 EZR chr6 159239113 - SNX9 chr6 158317858 + Exonic hg19 PRAD TCGA-VP-A875 2 In-Frame Intra-chr q25.3 q25.3 Seq+ 11853 ChimerSeq FusionScan TCGA_RNA-Seq TERF2IP-AMY1A TERF2IP chr16 75682450 + AMY1A chr1 104301090 + Exonic hg19 PRAD TCGA-YL-A8S9 4 Out-of-Frame Inter-chr q23.1 p21.1 Seq+ 11854 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649521 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-HC-A6AQ 2 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 11855 ChimerSeq FusionScan TCGA_RNA-Seq NDRG1-ERG NDRG1 chr8 134292474 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-V1-A8WW 4 In-Frame Inter-chr q24.22 Tumor suppressor gene q22.2 Oncogene Transcription factor KB Pub Seq+ 11856 ChimerSeq FusionScan TCGA_RNA-Seq PIEZO1-MNS1 PIEZO1 chr16 88851308 - MNS1 chr15 56756445 - Exonic hg19 PRAD TCGA-V1-A8WL 4 Out-of-Frame Inter-chr q24.3 q21.3 Seq+ 11857 ChimerSeq FusionScan TCGA_RNA-Seq FBXO34-ATG7 FBXO34 chr14 55738255 + ATG7 chr3 11596284 + Exonic hg19 PRAD TCGA-V1-A8WL 2 5'UTR-CDS Inter-chr q22.3 p25.3 Seq+ 11858 ChimerSeq FusionScan TCGA_RNA-Seq MRPL30-CCDC57 MRPL30 chr2 99797712 + CCDC57 chr17 80115824 - Exonic hg19 PRAD TCGA-EJ-5532 4 5'UTR-CDS Inter-chr q11.2 q25.3 Seq+ 11859 ChimerSeq FusionScan TCGA_RNA-Seq SAE1-BAX SAE1 chr19 47646862 + BAX chr19 49464066 + Exonic hg19 PRAD TCGA-EJ-5532 4 In-Frame Intra-chr q13.32 q13.33 Tumor suppressor gene Seq+ 11860 ChimerSeq FusionScan TCGA_RNA-Seq SENP6-ACACB SENP6 chr6 76333676 + ACACB chr12 109680241 + Exonic hg19 PRAD TCGA-YL-A9WJ 5 CDS-3'UTR Inter-chr q14.1 q24.11 Seq+ 11861 ChimerSeq FusionScan TCGA_RNA-Seq TESC-ASAH1 TESC chr12 117537029 - ASAH1 chr8 17933096 - Exonic hg19 PRAD TCGA-YL-A9WJ 5 Out-of-Frame Inter-chr q24.22 p22 Seq+ 11862 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-CHMP1A CPSF6 chr12 69656342 + CHMP1A chr16 89713739 - Exonic hg19 PRAD TCGA-YL-A9WJ 3 3'UTR-3'UTR Inter-chr q15 q24.3 Seq+ 11863 ChimerSeq FusionScan TCGA_RNA-Seq TMEM97-BLMH TMEM97 chr17 26646391 + BLMH chr17 28601215 - Exonic hg19 PRAD TCGA-HC-7742 2 In-Frame Intra-chr q11.2 q11.2 Seq+ 11864 ChimerSeq FusionScan TCGA_RNA-Seq AGPAT6-ADAM9 AGPAT6 chr8 41456823 + ADAM9 chr8 38899464 + Exonic hg19 PRAD TCGA-EJ-5522 3 Out-of-Frame Intra-chr Seq+ 11865 ChimerSeq FusionScan TCGA_RNA-Seq POLR2J3-KLK3 POLR2J3 chr7 102180461 - KLK3 chr19 51363227 + Exonic hg19 PRAD TCGA-QU-A6IO 2 3'UTR-CDS Inter-chr q22.1 q13.33 11866 ChimerSeq FusionScan TCGA_RNA-Seq DYNC1H1-EVL DYNC1H1 chr14 102478807 + EVL chr14 100551023 + Exonic hg19 PRAD TCGA-YJ-A8SW 5 Out-of-Frame Intra-chr q32.31 q32.2 Seq+ 11867 ChimerSeq FusionScan TCGA_RNA-Seq EPS15L1-CPAMD8 EPS15L1 chr19 16582723 - CPAMD8 chr19 17049256 - Exonic hg19 PRAD TCGA-YJ-A8SW 4 In-Frame Intra-chr p13.11 p13.11 Seq+ 11868 ChimerSeq FusionScan TCGA_RNA-Seq DHX30-LIMD1 DHX30 chr3 47844702 + LIMD1 chr3 45707141 + Exonic hg19 PRAD TCGA-YJ-A8SW 4 5'UTR-CDS Intra-chr p21.31 p21.31 Tumor suppressor gene Seq+ 11869 ChimerSeq FusionScan TCGA_RNA-Seq IMMP2L-DOCK4 IMMP2L chr7 111161368 - DOCK4 chr7 111409733 - Exonic hg19 PRAD TCGA-YJ-A8SW 2 Out-of-Frame Intra-chr q31.1 q31.1 KB Pub Seq+ 11870 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-RNF139 PVT1 chr8 128806980 + RNF139 chr8 125498071 + Exonic hg19 PRAD TCGA-YJ-A8SW 2 5'UTR-CDS Intra-chr q24.21 q24.13 Seq+ 11871 ChimerSeq FusionScan TCGA_RNA-Seq PRUNE-RAB7A PRUNE chr1 150981147 + RAB7A chr3 128514202 + Exonic hg19 PRAD TCGA-YJ-A8SW 2 CDS-5'UTR Inter-chr q21.3 Tumor suppressor gene Seq+ 11872 ChimerSeq FusionScan TCGA_RNA-Seq HDLBP-NSRP1 HDLBP chr2 242169247 - NSRP1 chr17 28499559 + Exonic hg19 PRAD TCGA-YJ-A8SW 2 In-Frame Inter-chr q37.3 q11.2 Seq+ 11873 ChimerSeq FusionScan TCGA_RNA-Seq SETD5-GADL1 SETD5 chr3 9439661 + GADL1 chr3 30898633 - Exonic hg19 PRAD TCGA-ZG-A8QZ 4 5'UTR-CDS Intra-chr p25.3 p23 Seq+ 11874 ChimerSeq FusionScan TCGA_RNA-Seq RAD17-SEC24A RAD17 chr5 68670538 + SEC24A chr5 134050713 + Exonic hg19 PRAD TCGA-EJ-5524 2 In-Frame Intra-chr q31.1 Seq+ 11875 ChimerSeq FusionScan TCGA_RNA-Seq PPM1H-KIAA1467 PPM1H chr12 63131281 - KIAA1467 chr12 13214508 + Exonic hg19 PRAD TCGA-EJ-5524 2 Out-of-Frame Intra-chr q14.2 Seq+ 11876 ChimerSeq FusionScan TCGA_RNA-Seq AMACR-NDUFAF2 AMACR chr5 33998745 - NDUFAF2 chr5 60368951 + Exonic hg19 PRAD TCGA-EJ-8474 3 In-Frame Intra-chr p13.2 q12.1 Seq+ 11877 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-SARS TMPRSS2 chr21 42860320 - SARS chr1 109766599 + Exonic hg19 PRAD TCGA-EJ-8474 3 In-Frame Inter-chr q22.3 p13.3 Seq+ 11878 ChimerSeq FusionScan TCGA_RNA-Seq FAM13C-S100P FAM13C chr10 61112029 - S100P chr4 6698619 + Exonic hg19 PRAD TCGA-EJ-8474 3 In-Frame Inter-chr q21.1 p16.1 Seq+ 11879 ChimerSeq FusionScan TCGA_RNA-Seq C7orf44-AMPH C7orf44 chr7 43769027 - AMPH chr7 38574611 - Exonic hg19 PRAD TCGA-TP-A8TV 2 5'UTR-CDS Intra-chr p14.1 Seq+ 11880 ChimerSeq FusionScan TCGA_RNA-Seq TXLNG-CTPS2 TXLNG chrX 16804712 + CTPS2 chrX 16657366 - Exonic hg19 PRAD TCGA-EJ-5514 2 In-Frame Intra-chr p22.2 p22.2 11881 ChimerSeq FusionScan TCGA_RNA-Seq HKR1-FECH HKR1 chr19 37838774 + FECH chr18 55218606 - Exonic hg19 PRAD TCGA-EJ-5514 2 Out-of-Frame Inter-chr q13.12 Transcription factor q21.31 Seq+ 11882 ChimerSeq FusionScan TCGA_RNA-Seq ACPP-AXL ACPP chr3 132075699 + AXL chr19 41748787 + Exonic hg19 PRAD TCGA-J4-A6G3 4 In-Frame Inter-chr q22.1 q13.2 TK:Axl Oncogene Seq+ 11883 ChimerSeq FusionScan TCGA_RNA-Seq NINL-NAA20 NINL chr20 25507043 - NAA20 chr20 20007427 + Exonic hg19 PRAD TCGA-G9-6351 2 Out-of-Frame Intra-chr p11.21 p11.23 Seq+ 11884 ChimerSeq FusionScan TCGA_RNA-Seq KANSL1-DHX30 KANSL1 chr17 44270188 - DHX30 chr3 47891356 + Exonic hg19 PRAD TCGA-CH-5737 2 3'UTR-CDS Inter-chr p21.31 Seq+ 11885 ChimerSeq FusionScan TCGA_RNA-Seq VGLL3-RBMS3 VGLL3 chr3 87017739 - RBMS3 chr3 29628604 + Exonic hg19 PRAD TCGA-G9-7510 2 In-Frame Intra-chr p12.1 p24.1 Tumor suppressor gene Seq+ 11886 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ATF7IP TMPRSS2 chr21 42870045 - ATF7IP chr12 14613428 + Exonic hg19 PRAD TCGA-EJ-7784 2 Out-of-Frame Inter-chr q22.3 p13.1 Seq+ 11887 ChimerSeq FusionScan TCGA_RNA-Seq ATF7IP-TMPRSS2 ATF7IP chr12 14610229 + TMPRSS2 chr21 42861520 - Exonic hg19 PRAD TCGA-EJ-7784 2 In-Frame Inter-chr p13.1 q22.3 Seq+ 11888 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R21-DNAH6 PPP1R21 chr2 48692781 + DNAH6 chr2 85046428 + Exonic hg19 PRAD TCGA-EJ-7321 2 Out-of-Frame Intra-chr p16.3 p11.2 Seq+ 11889 ChimerSeq FusionScan TCGA_RNA-Seq RRBP1-MACROD2 RRBP1 chr20 17662672 - MACROD2 chr20 15843389 + Exonic hg19 PRAD TCGA-HC-7736 6 5'UTR-5'UTR Intra-chr p12.1 p12.1 Seq+ 11890 ChimerSeq FusionScan TCGA_RNA-Seq SNX4-LINC00152 SNX4 chr3 125238875 - LINC00152 chr2 87820725 + Exonic hg19 PRAD TCGA-J4-A67Q 2 CDS-5'UTR Inter-chr q21.2 11891 ChimerSeq FusionScan TCGA_RNA-Seq FDPS-IPO9 FDPS chr1 155282186 + IPO9 chr1 201840288 + Exonic hg19 PRAD TCGA-J4-A67Q 2 In-Frame Intra-chr q22 q32.1 Seq+ 11892 ChimerSeq FusionScan TCGA_RNA-Seq SRP54-METTL3 SRP54 chr14 35488280 + METTL3 chr14 21967946 - Exonic hg19 PRAD TCGA-KK-A7B2 2 Out-of-Frame Intra-chr q13.2 q11.2 11893 ChimerSeq FusionScan TCGA_RNA-Seq PCNP-ALDH9A1 PCNP chr3 101293123 + ALDH9A1 chr1 165634367 - Exonic hg19 PRAD TCGA-HC-7745 2 Out-of-Frame Inter-chr q12.3 q24.1 11894 ChimerSeq FusionScan TCGA_RNA-Seq PPAP2A-CNTLN PPAP2A chr5 54830399 - CNTLN chr9 17484292 + Exonic hg19 PRAD TCGA-2A-A8VV 5 Out-of-Frame Inter-chr p22.2 Seq+ 11895 ChimerSeq FusionScan TCGA_RNA-Seq MZT2B-SOD2 MZT2B chr2 130940348 + SOD2 chr6 160106065 - Exonic hg19 PRAD TCGA-2A-A8VV 3 In-Frame Inter-chr q21.1 q25.3 Tumor suppressor gene 11896 ChimerSeq FusionScan TCGA_RNA-Seq FBXL5-RAB28 FBXL5 chr4 15656826 - RAB28 chr4 13481150 - Exonic hg19 PRAD TCGA-M7-A724 2 In-Frame Intra-chr p15.32 p15.33 Seq+ 11897 ChimerSeq FusionScan TCGA_RNA-Seq PMEPA1-ETV4 PMEPA1 chr20 56284529 - ETV4 chr17 41613847 - Exonic hg19 PRAD TCGA-CH-5762 13 In-Frame Inter-chr q13.31 q21.31 Oncogene Transcription factor Seq+ 11898 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-MORC3 TMPRSS2 chr21 42880007 - MORC3 chr21 37705943 + Exonic hg19 PRAD TCGA-CH-5762 3 5'UTR-CDS Intra-chr q22.3 q22.12 Seq+ 11899 ChimerSeq FusionScan TCGA_RNA-Seq PMEPA1-ETV4 PMEPA1 chr20 56286379 - ETV4 chr17 41613847 - Exonic hg19 PRAD TCGA-CH-5762 2 5'UTR-CDS Inter-chr q13.31 q21.31 Oncogene Transcription factor Seq+ 11900 ChimerSeq FusionScan TCGA_RNA-Seq PHC2-HSP90AA1 PHC2 chr1 33794470 - HSP90AA1 chr14 102568422 - Exonic hg19 PRAD TCGA-YL-A8HM 2 Out-of-Frame Inter-chr p35.1 q32.31 Oncogene Seq+ 11901 ChimerSeq FusionScan TCGA_RNA-Seq TXLNG-CTPS2 TXLNG chrX 16804712 + CTPS2 chrX 16657366 - Exonic hg19 PRAD TCGA-EJ-5514 2 In-Frame Intra-chr p22.2 p22.2 11902 ChimerSeq FusionScan TCGA_RNA-Seq HKR1-FECH HKR1 chr19 37838774 + FECH chr18 55218606 - Exonic hg19 PRAD TCGA-EJ-5514 2 Out-of-Frame Inter-chr q13.12 Transcription factor q21.31 Seq+ 11903 ChimerSeq FusionScan TCGA_RNA-Seq MRPL30-CCDC57 MRPL30 chr2 99797712 + CCDC57 chr17 80115824 - Exonic hg19 PRAD TCGA-EJ-5532 4 5'UTR-CDS Inter-chr q11.2 q25.3 Seq+ 11904 ChimerSeq FusionScan TCGA_RNA-Seq SAE1-BAX SAE1 chr19 47646862 + BAX chr19 49464066 + Exonic hg19 PRAD TCGA-EJ-5532 4 In-Frame Intra-chr q13.32 q13.33 Tumor suppressor gene Seq+ 11905 ChimerSeq FusionScan TCGA_RNA-Seq EPHA6-CNTN6 EPHA6 chr3 96585733 + CNTN6 chr3 1443116 + Exonic hg19 PRAD TCGA-KK-A59X 2 Out-of-Frame Intra-chr q11.2 p26.3 Seq+ 11906 ChimerSeq FusionScan TCGA_RNA-Seq FAM35A-PTEN FAM35A chr10 88855005 + PTEN chr10 89685269 + Exonic hg19 PRAD TCGA-ZG-A9L9 2 5'UTR-CDS Intra-chr q23.2 q23.31 Oncogene Tumor suppressor gene Seq+ 11907 ChimerSeq FusionScan TCGA_RNA-Seq SLC9A3R1-FBXO18 SLC9A3R1 chr17 72745426 + FBXO18 chr10 5978418 + Exonic hg19 PRAD TCGA-EJ-7318 3 In-Frame Inter-chr q25.1 Tumor suppressor gene p15.1 Seq+ 11908 ChimerSeq FusionScan TCGA_RNA-Seq TMEM104-LIN52 TMEM104 chr17 72773514 + LIN52 chr14 74557934 + Exonic hg19 PRAD TCGA-EJ-7318 3 Out-of-Frame Inter-chr q25.1 q24.3 Seq+ 11909 ChimerSeq FusionScan TCGA_RNA-Seq PCA3-AMACR PCA3 chr9 79379471 + AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-EJ-7318 2 5'UTR-CDS Inter-chr q21.2 p13.2 11910 ChimerSeq FusionScan TCGA_RNA-Seq SKIV2L2-SCCPDH SKIV2L2 chr5 54711960 + SCCPDH chr1 246890193 + Exonic hg19 PRAD TCGA-EJ-5519 5 In-Frame Inter-chr q11.2 q44 Seq+ 11911 ChimerSeq FusionScan TCGA_RNA-Seq FBXO25-YLPM1 FBXO25 chr8 363213 + YLPM1 chr14 75295915 + Exonic hg19 PRAD TCGA-G9-6496 2 Out-of-Frame Inter-chr p23.3 Tumor suppressor gene q24.3 11912 ChimerSeq FusionScan TCGA_RNA-Seq WDFY3-HNRNPD WDFY3 chr4 85818063 - HNRNPD chr4 83276554 - Exonic hg19 PRAD TCGA-J4-A67M 2 5'UTR-CDS Intra-chr q21.23 q21.22 Seq+ 11913 ChimerSeq FusionScan TCGA_RNA-Seq AGPAT6-ADAM9 AGPAT6 chr8 41456823 + ADAM9 chr8 38899464 + Exonic hg19 PRAD TCGA-EJ-5522 2 Out-of-Frame Intra-chr Seq+ 11914 ChimerSeq FusionScan TCGA_RNA-Seq SLC30A6-GNA11 SLC30A6 chr2 32396442 + GNA11 chr19 3110146 + Exonic hg19 PRAD TCGA-CH-5754 3 Out-of-Frame Inter-chr p22.3 p13.3 Oncogene Seq+ 11915 ChimerSeq FusionScan TCGA_RNA-Seq GNA11-SLC30A6 GNA11 chr19 3094785 + SLC30A6 chr2 32400387 + Exonic hg19 PRAD TCGA-CH-5754 2 In-Frame Inter-chr p13.3 Oncogene p22.3 Seq+ 11916 ChimerSeq FusionScan TCGA_RNA-Seq GALNT7-CEP44 GALNT7 chr4 174225269 + CEP44 chr4 175252632 + Exonic hg19 PRAD TCGA-VP-AA1N 2 In-Frame Intra-chr q34.1 q34.1 Seq+ 11917 ChimerSeq FusionScan TCGA_RNA-Seq GSR-RBPMS GSR chr8 30585046 - RBPMS chr8 30416403 + Exonic hg19 PRAD TCGA-EJ-5521 5 In-Frame Intra-chr p12 p12 Seq+ 11918 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1-RNF4 WHSC1 chr4 1873269 + RNF4 chr4 2492063 + Exonic hg19 PRAD TCGA-EJ-5521 2 5'UTR-5'UTR Intra-chr Oncogene p16.3 Seq+ 11919 ChimerSeq FusionScan TCGA_RNA-Seq DSG2-TTR DSG2 chr18 29078259 + TTR chr18 29172858 + Exonic hg19 PRAD TCGA-ZG-A9N3 6 In-Frame Intra-chr q12.1 q12.1 Seq+ 11920 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649521 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-YL-A9WX 3 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 11921 ChimerSeq FusionScan TCGA_RNA-Seq NRP1-PTEN NRP1 chr10 33619635 - PTEN chr10 89717609 + Exonic hg19 PRAD TCGA-HC-A48F 3 Out-of-Frame Intra-chr p11.22 q23.31 Oncogene Tumor suppressor gene Seq+ 11922 ChimerSeq FusionScan TCGA_RNA-Seq C2orf63-FAM98A C2orf63 chr2 55459358 - FAM98A chr2 33812387 - Exonic hg19 PRAD TCGA-HC-A48F 2 5'UTR-CDS Intra-chr p22.3 Seq+ 11923 ChimerSeq FusionScan TCGA_RNA-Seq PCGF3-GET4 PCGF3 chr4 738476 + GET4 chr7 925692 + Exonic hg19 PRAD TCGA-CH-5794 2 Out-of-Frame Inter-chr p16.3 p22.3 11924 ChimerSeq FusionScan TCGA_RNA-Seq PUM2-FAM49A PUM2 chr2 20494136 - FAM49A chr2 16769397 - Exonic hg19 PRAD TCGA-CH-5794 2 CDS-5'UTR Intra-chr p24.1 p24.2 Seq+ 11925 ChimerSeq FusionScan TCGA_RNA-Seq KIF5B-HHAT KIF5B chr10 32337391 - HHAT chr1 210637848 + Exonic hg19 PRAD TCGA-VN-A88L 2 In-Frame Inter-chr p11.22 Seq+ 11926 ChimerSeq FusionScan TCGA_RNA-Seq ERG-RPS18 ERG chr21 39947585 - RPS18 chr6 33240404 + Exonic hg19 PRAD TCGA-VN-A88L 2 CDS-3'UTR Inter-chr q22.2 Oncogene Transcription factor Seq+ 11927 ChimerSeq FusionScan TCGA_RNA-Seq SYNCRIP-EPB41L2 SYNCRIP chr6 86333694 - EPB41L2 chr6 131161738 - Exonic hg19 PRAD TCGA-VN-A88Q 2 CDS-3'UTR Intra-chr q14.3 q23.2 11928 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-KK-A7AW 4 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11929 ChimerSeq FusionScan TCGA_RNA-Seq MATR3-PAIP2 MATR3 chr5 138629494 + PAIP2 chr5 138699447 + Exonic hg19 PRAD TCGA-HC-8261 2 5'UTR-5'UTR Intra-chr q31.2 q31.2 Tumor suppressor gene 11930 ChimerSeq FusionScan TCGA_RNA-Seq TOB2-MRPS18B TOB2 chr22 41842382 - MRPS18B chr6 30592659 + Exonic hg19 PRAD TCGA-2A-A8W1 3 5'UTR-3'UTR Inter-chr q13.2 Seq+ 11931 ChimerSeq FusionScan TCGA_RNA-Seq ACSL3-LINC00592 ACSL3 chr2 223797998 + LINC00592 chr12 52617229 + Exonic hg19 PRAD TCGA-J9-A8CK 4 CDS-5'UTR Inter-chr q36.1 q13.13 Seq+ 11932 ChimerSeq FusionScan TCGA_RNA-Seq BAZ1B-ZP3 BAZ1B chr7 72873865 - ZP3 chr7 76069566 + Exonic hg19 PRAD TCGA-HC-8265 3 In-Frame Intra-chr q11.23 q11.23 Seq+ 11933 ChimerSeq FusionScan TCGA_RNA-Seq SMARCC1-SPINK8 SMARCC1 chr3 47777523 - SPINK8 chr3 48351436 - Exonic hg19 PRAD TCGA-HC-8265 3 Out-of-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 11934 ChimerSeq FusionScan TCGA_RNA-Seq BAZ1B-POMZP3 BAZ1B chr7 72873865 - POMZP3 chr7 76241130 - Exonic hg19 PRAD TCGA-HC-8265 3 In-Frame Intra-chr q11.23 Seq+ 11935 ChimerSeq FusionScan TCGA_RNA-Seq WARS2-SEC22B WARS2 chr1 119683177 - SEC22B chr1 145103907 + Exonic hg19 PRAD TCGA-HC-8265 2 In-Frame Intra-chr p12 p12 11936 ChimerSeq FusionScan TCGA_RNA-Seq NPDC1-TMEM63A NPDC1 chr9 139940329 - TMEM63A chr1 226050551 - Exonic hg19 PRAD TCGA-HC-8265 2 Out-of-Frame Inter-chr q34.3 q42.12 11937 ChimerSeq FusionScan TCGA_RNA-Seq HBS1L-IL9 HBS1L chr6 135371719 - IL9 chr5 135228199 - Exonic hg19 PRAD TCGA-EJ-7794 2 Out-of-Frame Inter-chr q23.3 q31.1 Seq+ 11938 ChimerSeq FusionScan TCGA_RNA-Seq TUBB3-TRPM5 TUBB3 chr16 89989866 + TRPM5 chr11 2439821 - Exonic hg19 PRAD TCGA-V1-A9ZI 2 Out-of-Frame Inter-chr q24.3 p15.5 Seq+ 11939 ChimerSeq FusionScan TCGA_RNA-Seq MLLT4-SYK MLLT4 chr6 168227917 + SYK chr9 93606139 + Exonic hg19 PRAD TCGA-V1-A9OY 2 CDS-5'UTR Inter-chr q22.2 TK:Syk Oncogene Tumor suppressor gene Seq+ 11940 ChimerSeq FusionScan TCGA_RNA-Seq KDM2A-C11orf80 KDM2A chr11 66888829 + C11orf80 chr11 66555630 + Exonic hg19 PRAD TCGA-EJ-A46G 4 Out-of-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 11941 ChimerSeq FusionScan TCGA_RNA-Seq ARID1A-HMGN2 ARID1A chr1 27024031 + HMGN2 chr1 26799973 + Exonic hg19 PRAD TCGA-EJ-A46G 3 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 Seq+ 11942 ChimerSeq FusionScan TCGA_RNA-Seq EHMT1-GRIN1 EHMT1 chr9 140707982 + GRIN1 chr9 140036464 + Exonic hg19 PRAD TCGA-EJ-A46G 2 In-Frame Intra-chr q34.3 q34.3 Seq+ 11943 ChimerSeq FusionScan TCGA_RNA-Seq KDM2A-C11orf80 KDM2A chr11 66888829 + C11orf80 chr11 66568111 + Exonic hg19 PRAD TCGA-EJ-A46G 2 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 11944 ChimerSeq FusionScan TCGA_RNA-Seq SLC11A2-CDC27 SLC11A2 chr12 51420092 - CDC27 chr17 45206887 - Exonic hg19 PRAD TCGA-X4-A8KQ 4 5'UTR-CDS Inter-chr q13.12 q21.32 Seq+ 11945 ChimerSeq FusionScan TCGA_RNA-Seq SLC11A2-CDC27 SLC11A2 chr12 51420097 - CDC27 chr17 45206887 - Exonic hg19 PRAD TCGA-X4-A8KQ 3 5'UTR-CDS Inter-chr q13.12 q21.32 Seq+ 11946 ChimerSeq FusionScan TCGA_RNA-Seq KANSL1-DHX30 KANSL1 chr17 44270188 - DHX30 chr3 47891356 + Exonic hg19 PRAD TCGA-CH-5737 2 3'UTR-CDS Inter-chr p21.31 Seq+ 11947 ChimerSeq FusionScan TCGA_RNA-Seq SRRM2-SNRPE SRRM2 chr16 2810500 + SNRPE chr1 203839004 + Exonic hg19 PRAD TCGA-V1-A8X3 3 Out-of-Frame Inter-chr p13.3 q32.1 Seq+ 11948 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-SARS TMPRSS2 chr21 42860320 - SARS chr1 109766599 + Exonic hg19 PRAD TCGA-EJ-8474 5 In-Frame Inter-chr q22.3 p13.3 Seq+ 11949 ChimerSeq FusionScan TCGA_RNA-Seq AMACR-NDUFAF2 AMACR chr5 33998745 - NDUFAF2 chr5 60368951 + Exonic hg19 PRAD TCGA-EJ-8474 4 In-Frame Intra-chr p13.2 q12.1 Seq+ 11950 ChimerSeq FusionScan TCGA_RNA-Seq FAM13C-S100P FAM13C chr10 61112029 - S100P chr4 6698619 + Exonic hg19 PRAD TCGA-EJ-8474 3 In-Frame Inter-chr q21.1 p16.1 Seq+ 11951 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42880007 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-YL-A8SC 14 5'UTR-CDS Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 11952 ChimerSeq FusionScan TCGA_RNA-Seq NBR1-C17orf104 NBR1 chr17 41345655 + C17orf104 chr17 42751343 + Exonic hg19 PRAD TCGA-YL-A8SC 4 Out-of-Frame Intra-chr q21.31 Seq+ 11953 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42880007 - ETV1 chr7 13971374 - Exonic hg19 PRAD TCGA-YL-A8SC 2 5'UTR-CDS Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 11954 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42879876 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-YL-A8SC 2 In-Frame Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 11955 ChimerSeq FusionScan TCGA_RNA-Seq MATR3-AMACR MATR3 chr5 138629494 + AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-YL-A8SC 2 5'UTR-CDS Intra-chr q31.2 p13.2 11956 ChimerSeq FusionScan TCGA_RNA-Seq PHF12-KIAA0100 PHF12 chr17 27277082 - KIAA0100 chr17 26971205 - Exonic hg19 PRAD TCGA-YL-A8SC 2 In-Frame Intra-chr q11.2 q11.2 Seq+ 11957 ChimerSeq FusionScan TCGA_RNA-Seq SLC30A4-AMACR SLC30A4 chr15 45814161 - AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-YL-A8SC 2 In-Frame Inter-chr q21.1 p13.2 11958 ChimerSeq FusionScan TCGA_RNA-Seq NRF1-MLXIPL NRF1 chr7 129251665 + MLXIPL chr7 73030507 - Exonic hg19 PRAD TCGA-KK-A7B4 4 5'UTR-CDS Intra-chr q32.2 Tumor suppressor gene Transcription factor q11.23 Transcription factor Seq+ 11959 ChimerSeq FusionScan TCGA_RNA-Seq SUFU-KCNH2 SUFU chr10 104309863 + KCNH2 chr7 150672029 - Exonic hg19 PRAD TCGA-G9-A9S4 2 In-Frame Inter-chr q24.32 Oncogene Tumor suppressor gene q36.1 Seq+ 11960 ChimerSeq FusionScan TCGA_RNA-Seq C5AR1-HSD17B14 C5AR1 chr19 47813155 + HSD17B14 chr19 49318398 - Exonic hg19 PRAD TCGA-KK-A6E7 2 In-Frame Intra-chr q13.32 q13.33 11961 ChimerSeq FusionScan TCGA_RNA-Seq CHD1-SLCO6A1 CHD1 chr5 98228228 - SLCO6A1 chr5 101748847 - Exonic hg19 PRAD TCGA-HC-A6AP 2 In-Frame Intra-chr q21.1 Tumor suppressor gene q21.1 Seq+ 11962 ChimerSeq FusionScan TCGA_RNA-Seq SNX13-TSPAN13 SNX13 chr7 17979906 - TSPAN13 chr7 16815835 + Exonic hg19 PRAD TCGA-HC-7819 2 In-Frame Intra-chr p21.1 p21.1 Tumor suppressor gene 11963 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649521 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-2A-A8W3 7 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 11964 ChimerSeq FusionScan TCGA_RNA-Seq COLEC12-AMACR COLEC12 chr18 480706 - AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-2A-A8W3 2 In-Frame Inter-chr p11.32 p13.2 11965 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-BRAF TMPRSS2 chr21 42866282 - BRAF chr7 140481493 - Exonic hg19 PRAD TCGA-FC-A6HD 3 Out-of-Frame Inter-chr q22.3 q34 TKL:RAF Oncogene Seq+ 11966 ChimerSeq FusionScan TCGA_RNA-Seq SNX4-LINC00152 SNX4 chr3 125238875 - LINC00152 chr2 87820725 + Exonic hg19 PRAD TCGA-J4-A67Q 2 CDS-5'UTR Inter-chr q21.2 11967 ChimerSeq FusionScan TCGA_RNA-Seq FDPS-IPO9 FDPS chr1 155282186 + IPO9 chr1 201840288 + Exonic hg19 PRAD TCGA-J4-A67Q 2 In-Frame Intra-chr q22 q32.1 Seq+ 11968 ChimerSeq FusionScan TCGA_RNA-Seq DYNLRB1-C20orf152 DYNLRB1 chr20 33114148 + C20orf152 chr20 34596218 + Exonic hg19 PRAD TCGA-HC-8257 3 In-Frame Intra-chr q11.22 11969 ChimerSeq FusionScan TCGA_RNA-Seq NDRG1-MYC NDRG1 chr8 134292474 - MYC chr8 128750493 + Exonic hg19 PRAD TCGA-XK-AAIV 3 In-Frame Intra-chr q24.22 Tumor suppressor gene q24.21 Oncogene Transcription factor Seq+ 11970 ChimerSeq FusionScan TCGA_RNA-Seq RBM47-LEF1 RBM47 chr4 40631412 - LEF1 chr4 108969907 - Exonic hg19 PRAD TCGA-XK-AAIV 2 5'UTR-CDS Intra-chr p14 q25 Transcription factor Seq+ 11971 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD22-MSMB ANKRD22 chr10 90585794 - MSMB chr10 51555730 + Exonic hg19 PRAD TCGA-XK-AAIV 2 In-Frame Intra-chr q23.31 q11.22 Tumor suppressor gene Seq+ 11972 ChimerSeq FusionScan TCGA_RNA-Seq FRMD8-PSMD9 FRMD8 chr11 65172539 + PSMD9 chr12 122353761 + Exonic hg19 PRAD TCGA-XK-AAIV 2 Out-of-Frame Inter-chr q13.1 q24.31 Seq+ 11973 ChimerSeq FusionScan TCGA_RNA-Seq FAM168B-ANKRD42 FAM168B chr2 131840149 - ANKRD42 chr11 82935896 + Exonic hg19 PRAD TCGA-XK-AAIV 2 In-Frame Inter-chr q21.1 q14.1 Seq+ 11974 ChimerSeq FusionScan TCGA_RNA-Seq MAT2B-SFXN1 MAT2B chr5 162932755 + SFXN1 chr5 174919097 + Exonic hg19 PRAD TCGA-XK-AAIV 2 CDS-5'UTR Intra-chr q34 q35.2 Seq+ 11975 ChimerSeq FusionScan TCGA_RNA-Seq HSF1-MICALL1 HSF1 chr8 145515556 + MICALL1 chr22 38307958 + Exonic hg19 PRAD TCGA-XK-AAIV 2 Out-of-Frame Inter-chr q24.3 Transcription factor q13.1 Seq+ 11976 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-ETV4 CLTC chr17 57744338 + ETV4 chr17 41613847 - Exonic hg19 PRAD TCGA-V1-A9ZR 5 In-Frame Intra-chr q23.1 q21.31 Oncogene Transcription factor Seq+ 11977 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-G9-6371 20 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11978 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42879876 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-G9-6371 3 Out-of-Frame Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11979 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41613847 - Exonic hg19 PRAD TCGA-G9-6371 2 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11980 ChimerSeq FusionScan TCGA_RNA-Seq WDFY3-HNRNPD WDFY3 chr4 85818063 - HNRNPD chr4 83276554 - Exonic hg19 PRAD TCGA-J4-A67M 2 5'UTR-CDS Intra-chr q21.23 q21.22 Seq+ 11981 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-KK-A7AW 4 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 11982 ChimerSeq FusionScan TCGA_RNA-Seq TERF2IP-AMY1A TERF2IP chr16 75682450 + AMY1A chr1 104301090 + Exonic hg19 PRAD TCGA-YL-A8S9 4 Out-of-Frame Inter-chr q23.1 p21.1 Seq+ 11983 ChimerSeq FusionScan TCGA_RNA-Seq COL6A2-FUS COL6A2 chr21 47546455 + FUS chr16 31199645 + Exonic hg19 PRAD TCGA-FC-7961 2 In-Frame Inter-chr q22.3 p11.2 Tumor suppressor gene 11984 ChimerSeq FusionScan TCGA_RNA-Seq SERINC5-PPAP2A SERINC5 chr5 79551714 - PPAP2A chr5 54721867 - Exonic hg19 PRAD TCGA-HC-A6AS 7 In-Frame Intra-chr q14.1 Seq+ 11985 ChimerSeq FusionScan TCGA_RNA-Seq NFIX-CAPN12 NFIX chr19 13192669 + CAPN12 chr19 39233168 - Exonic hg19 PRAD TCGA-HC-A4ZV 7 Out-of-Frame Intra-chr p13.13 Transcription factor q13.2 Seq+ 11986 ChimerSeq FusionScan TCGA_RNA-Seq NFIX-CAPN12 NFIX chr19 13192669 + CAPN12 chr19 39233742 - Exonic hg19 PRAD TCGA-HC-A4ZV 3 In-Frame Intra-chr p13.13 Transcription factor q13.2 Seq+ 11987 ChimerSeq FusionScan TCGA_RNA-Seq NUDT22-RRP7A NUDT22 chr11 63997043 + RRP7A chr22 42914153 - Exonic hg19 PRAD TCGA-HC-A4ZV 2 Out-of-Frame Inter-chr q13.1 q13.2 11988 ChimerSeq FusionScan TCGA_RNA-Seq NCOA2-EIF4EBP1 NCOA2 chr8 71315934 - EIF4EBP1 chr8 37914598 + Exonic hg19 PRAD TCGA-FC-A4JI 6 5'UTR-CDS Intra-chr q13.3 Oncogene Transcription factor p11.23 Seq+ 11989 ChimerSeq FusionScan TCGA_RNA-Seq NAP1L4-ATP11B NAP1L4 chr11 2985909 - ATP11B chr3 182631648 + Exonic hg19 PRAD TCGA-FC-A4JI 5 In-Frame Inter-chr q26.33 Oncogene Seq+ 11990 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0146-SLA KIAA0146 chr8 48320523 + SLA chr8 134087375 - Exonic hg19 PRAD TCGA-FC-A4JI 3 CDS-5'UTR Intra-chr q24.22 Seq+ 11991 ChimerSeq FusionScan TCGA_RNA-Seq CAPZA2-C3orf26 CAPZA2 chr7 116528244 + C3orf26 chr3 99865816 + Exonic hg19 PRAD TCGA-FC-A4JI 2 In-Frame Inter-chr q31.2 Seq+ 11992 ChimerSeq FusionScan TCGA_RNA-Seq MAF1-TMEM205 MAF1 chr8 145161367 + TMEM205 chr19 11456304 - Exonic hg19 PRAD TCGA-YL-A8SB 2 CDS-5'UTR Inter-chr q24.3 p13.2 Seq+ 11993 ChimerSeq FusionScan TCGA_RNA-Seq DDX60-SPOCK3 DDX60 chr4 169157402 - SPOCK3 chr4 167983688 - Exonic hg19 PRAD TCGA-EJ-5509 2 In-Frame Intra-chr q32.3 q32.3 Seq+ 11994 ChimerSeq FusionScan TCGA_RNA-Seq TRAPPC9-JPH1 TRAPPC9 chr8 141034033 - JPH1 chr8 75171738 - Exonic hg19 PRAD TCGA-EJ-5509 2 In-Frame Intra-chr q24.3 q21.11 Seq+ 11995 ChimerSeq FusionScan TCGA_RNA-Seq ACPP-SAFB2 ACPP chr3 132036420 + SAFB2 chr19 5616346 - Exonic hg19 PRAD TCGA-HC-7233 5 In-Frame Inter-chr q22.1 p13.3 Tumor suppressor gene Transcription factor Seq+ 11996 ChimerSeq FusionScan TCGA_RNA-Seq ARF1-HSPA9 ARF1 chr1 228270466 + HSPA9 chr5 137904738 - Exonic hg19 PRAD TCGA-KK-A6E1 6 5'UTR-CDS Inter-chr q42.13 Tumor suppressor gene q31.2 Seq+ 11997 ChimerSeq FusionScan TCGA_RNA-Seq RYK-KALRN RYK chr3 133907680 - KALRN chr3 124149502 + Exonic hg19 PRAD TCGA-KK-A6E1 5 Out-of-Frame Intra-chr q22.2 TK:Ryk q21.1 Seq+ 11998 ChimerSeq FusionScan TCGA_RNA-Seq ERG-KCNJ6 ERG chr21 39947585 - KCNJ6 chr21 38997786 - Exonic hg19 PRAD TCGA-KK-A6E1 4 Out-of-Frame Intra-chr q22.2 Oncogene Transcription factor q22.13 Seq+ 11999 ChimerSeq FusionScan TCGA_RNA-Seq PLA2G16-SNHG1 PLA2G16 chr11 63365532 - SNHG1 chr11 62621305 - Exonic hg19 PRAD TCGA-KK-A6E1 3 CDS-3'UTR Intra-chr q13.1 Tumor suppressor gene q12.3 Seq+ 12000 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D25-HSPA9 TBC1D25 chrX 48399830 + HSPA9 chr5 137897478 - Exonic hg19 PRAD TCGA-KK-A6E1 2 Out-of-Frame Inter-chr p11.23 q31.2 Seq+ 12001 ChimerSeq FusionScan TCGA_RNA-Seq FAU-SRRM1 FAU chr11 64888452 - SRRM1 chr1 24975349 + Exonic hg19 PRAD TCGA-KK-A6E1 2 In-Frame Inter-chr q13.1 p36.11 Seq+ 12002 ChimerSeq FusionScan TCGA_RNA-Seq C4orf29-SLC25A31 C4orf29 chr4 128910976 + SLC25A31 chr4 128694540 + Exonic hg19 PRAD TCGA-J9-A8CL 3 Out-of-Frame Intra-chr q28.1 Seq+ 12003 ChimerSeq FusionScan TCGA_RNA-Seq PIAS1-ZNF609 PIAS1 chr15 68346688 + ZNF609 chr15 64970314 + Exonic hg19 PRAD TCGA-J9-A8CL 2 In-Frame Intra-chr q23 Tumor suppressor gene q22.31 Transcription factor Seq+ 12004 ChimerSeq FusionScan TCGA_RNA-Seq AGAP1-SP140 AGAP1 chr2 236403493 + SP140 chr2 231162135 + Exonic hg19 PRAD TCGA-J9-A8CL 2 Out-of-Frame Intra-chr q37.2 q37.1 Transcription factor Seq+ 12005 ChimerSeq FusionScan TCGA_RNA-Seq GOLPH3-SLC6A19 GOLPH3 chr5 32173915 - SLC6A19 chr5 1219017 + Exonic hg19 PRAD TCGA-EJ-5496 2 In-Frame Intra-chr p13.3 p15.33 Seq+ 12006 ChimerSeq FusionScan TCGA_RNA-Seq UBQLN4-AHCYL1 UBQLN4 chr1 156011275 - AHCYL1 chr1 110551655 + Exonic hg19 PRAD TCGA-VP-A87K 2 In-Frame Intra-chr q22 p13.3 Tumor suppressor gene Seq+ 12007 ChimerSeq FusionScan TCGA_RNA-Seq SIK3-TMPRSS2 SIK3 chr11 116968858 - TMPRSS2 chr21 42870116 - Exonic hg19 PRAD TCGA-EJ-5495 2 Out-of-Frame Inter-chr q23.3 q22.3 Seq+ 12008 ChimerSeq FusionScan TCGA_RNA-Seq EZR-SNX9 EZR chr6 159239113 - SNX9 chr6 158317858 + Exonic hg19 PRAD TCGA-VP-A875 2 In-Frame Intra-chr q25.3 q25.3 Seq+ 12009 ChimerSeq FusionScan TCGA_RNA-Seq CBLB-ALCAM CBLB chr3 105572257 - ALCAM chr3 105290695 + Exonic hg19 PRAD TCGA-HC-7075 2 In-Frame Intra-chr q13.11 q13.11 12010 ChimerSeq FusionScan TCGA_RNA-Seq NET1-ACSM3 NET1 chr10 5471192 + ACSM3 chr16 20807691 + Exonic hg19 PRAD TCGA-CH-5752 2 In-Frame Inter-chr p15.1 p12.3 Seq+ 12011 ChimerSeq FusionScan TCGA_RNA-Seq DTL-INTS7 DTL chr1 212220759 + INTS7 chr1 212194554 - Exonic hg19 PRAD TCGA-CH-5752 2 In-Frame Intra-chr q32.3 q32.3 Seq+ 12012 ChimerSeq FusionScan TCGA_RNA-Seq INTS7-DTL INTS7 chr1 212208685 - DTL chr1 212236225 + Exonic hg19 PRAD TCGA-CH-5752 2 In-Frame Intra-chr q32.3 q32.3 Seq+ 12013 ChimerSeq FusionScan TCGA_RNA-Seq FAM110B-DIABLO FAM110B chr8 58907365 + DIABLO chr12 122702944 - Exonic hg19 PRAD TCGA-EJ-5526 4 5'UTR-CDS Inter-chr q12.1 q24.31 Tumor suppressor gene Seq+ 12014 ChimerSeq FusionScan TCGA_RNA-Seq SNHG4-KDM3B SNHG4 chr5 138614097 + KDM3B chr5 137726701 + Exonic hg19 PRAD TCGA-EJ-5515 2 5'UTR-CDS Intra-chr q31.2 q31.2 Tumor suppressor gene Seq+ 12015 ChimerSeq FusionScan TCGA_RNA-Seq RAD17-SEC24A RAD17 chr5 68670538 + SEC24A chr5 134050713 + Exonic hg19 PRAD TCGA-EJ-5524 2 In-Frame Intra-chr q31.1 Seq+ 12016 ChimerSeq FusionScan TCGA_RNA-Seq PPM1H-KIAA1467 PPM1H chr12 63131281 - KIAA1467 chr12 13214508 + Exonic hg19 PRAD TCGA-EJ-5524 2 Out-of-Frame Intra-chr q14.2 Seq+ 12017 ChimerSeq FusionScan TCGA_RNA-Seq GCN1L1-METTL1 GCN1L1 chr12 120632482 - METTL1 chr12 58165040 - Exonic hg19 PRAD TCGA-2A-A8VT 3 Out-of-Frame Intra-chr q14.1 Seq+ 12018 ChimerSeq FusionScan TCGA_RNA-Seq PHC2-HSP90AA1 PHC2 chr1 33794470 - HSP90AA1 chr14 102568422 - Exonic hg19 PRAD TCGA-YL-A8HM 2 Out-of-Frame Inter-chr p35.1 q32.31 Oncogene Seq+ 12019 ChimerSeq FusionScan TCGA_RNA-Seq DOCK6-NSMCE4A DOCK6 chr19 11324950 - NSMCE4A chr10 123721032 - Exonic hg19 PRAD TCGA-G9-6365 2 Out-of-Frame Inter-chr p13.2 q26.13 12020 ChimerSeq FusionScan TCGA_RNA-Seq ELK4-HDAC3 ELK4 chr1 205600759 - HDAC3 chr5 141007754 - Exonic hg19 PRAD TCGA-YL-A8SK 2 5'UTR-CDS Inter-chr q32.1 Transcription factor q31.3 Tumor suppressor gene 12021 ChimerSeq FusionScan TCGA_RNA-Seq ZNF292-C6orf162 ZNF292 chr6 87865477 + C6orf162 chr6 88046726 + Exonic hg19 PRAD TCGA-EJ-A65G 2 CDS-5'UTR Intra-chr q14.3 Tumor suppressor gene Transcription factor 12022 ChimerSeq FusionScan TCGA_RNA-Seq COPA-STAC2 COPA chr1 160312920 - STAC2 chr17 37374426 - Exonic hg19 PRAD TCGA-CH-5745 2 Out-of-Frame Inter-chr q23.2 q12 Seq+ 12023 ChimerSeq FusionScan TCGA_RNA-Seq CCDC57-NPY CCDC57 chr17 80170660 - NPY chr7 24331281 + Exonic hg19 PRAD TCGA-G9-6338 3 5'UTR-CDS Inter-chr q25.3 p15.3 12024 ChimerSeq FusionScan TCGA_RNA-Seq SESTD1-CERKL SESTD1 chr2 180129225 - CERKL chr2 182412453 - Exonic hg19 PRAD TCGA-HC-8265 2 5'UTR-CDS Intra-chr q31.2 q31.3 12025 ChimerSeq FusionScan TCGA_RNA-Seq SESTD1-CERKL SESTD1 chr2 180129225 - CERKL chr2 182409523 - Exonic hg19 PRAD TCGA-HC-8265 2 5'UTR-CDS Intra-chr q31.2 q31.3 12026 ChimerSeq FusionScan TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649521 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-HC-7820 12 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 12027 ChimerSeq FusionScan TCGA_RNA-Seq OR51E2-AMACR OR51E2 chr11 4718882 - AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-HC-7820 2 5'UTR-CDS Inter-chr p15.4 p13.2 Seq+ 12028 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV5 TMPRSS2 chr21 42880007 - ETV5 chr3 185823731 - Exonic hg19 PRAD TCGA-ZG-A9L5 7 5'UTR-5'UTR Inter-chr q22.3 q27.2 Oncogene Transcription factor KB Pub Seq+ 12029 ChimerSeq FusionScan TCGA_RNA-Seq TRIM35-AMACR TRIM35 chr8 27168317 - AMACR chr5 33989607 - Exonic hg19 PRAD TCGA-ZG-A9L5 5 Out-of-Frame Inter-chr p21.2 Tumor suppressor gene p13.2 Seq+ 12030 ChimerSeq FusionScan TCGA_RNA-Seq KLK2-ORMDL2 KLK2 chr19 51376775 + ORMDL2 chr12 56211805 + Exonic hg19 PRAD TCGA-ZG-A9L5 5 5'UTR-5'UTR Inter-chr q13.33 q13.2 Seq+ 12031 ChimerSeq FusionScan TCGA_RNA-Seq MYO1E-C9orf3 MYO1E chr15 59548482 - C9orf3 chr9 97822975 + Exonic hg19 PRAD TCGA-ZG-A9L5 3 Out-of-Frame Inter-chr q22.2 q22.32 Seq+ 12032 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV5 TMPRSS2 chr21 42866282 - ETV5 chr3 185823731 - Exonic hg19 PRAD TCGA-ZG-A9L5 3 CDS-5'UTR Inter-chr q22.3 q27.2 Oncogene Transcription factor KB Pub Seq+ 12033 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV5 TMPRSS2 chr21 42870045 - ETV5 chr3 185823731 - Exonic hg19 PRAD TCGA-ZG-A9L5 3 CDS-5'UTR Inter-chr q22.3 q27.2 Oncogene Transcription factor KB Pub Seq+ 12034 ChimerSeq FusionScan TCGA_RNA-Seq LRP3-LSM14A LRP3 chr19 33685764 + LSM14A chr19 34685382 + Exonic hg19 PRAD TCGA-J4-A83I 2 In-Frame Intra-chr q13.11 Seq+ 12035 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42880007 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-EJ-5501 17 5'UTR-CDS Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 12036 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42879876 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-EJ-5501 6 In-Frame Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 12037 ChimerSeq FusionScan TCGA_RNA-Seq PHF21B-AMACR PHF21B chr22 45404425 - AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-EJ-5501 2 Out-of-Frame Inter-chr q13.31 p13.2 12038 ChimerSeq FusionScan TCGA_RNA-Seq COL6A2-FUS COL6A2 chr21 47546455 + FUS chr16 31199645 + Exonic hg19 PRAD TCGA-FC-7961 2 In-Frame Inter-chr q22.3 p11.2 Tumor suppressor gene 12039 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-IRS2 TMPRSS2 chr21 42860320 - IRS2 chr13 110408655 - Exonic hg19 PRAD TCGA-HI-7171 7 In-Frame Inter-chr q22.3 q34 Oncogene Seq+ 12040 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-IRS2 TMPRSS2 chr21 42861433 - IRS2 chr13 110408655 - Exonic hg19 PRAD TCGA-HI-7171 2 In-Frame Inter-chr q22.3 q34 Oncogene Seq+ 12041 ChimerSeq FusionScan TCGA_RNA-Seq CUX2-ANAPC11 CUX2 chr12 111472044 + ANAPC11 chr17 79852342 + Exonic hg19 PRAD TCGA-HI-7171 2 CDS-5'UTR Inter-chr q24.11 Transcription factor q25.3 Seq+ 12042 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPL-PTMA HNRNPL chr19 39342935 - PTMA chr2 232576057 + Exonic hg19 PRAD TCGA-HI-7171 2 5'UTR-CDS Inter-chr q37.1 12043 ChimerSeq FusionScan TCGA_RNA-Seq ZNF585A-CCDC3 ZNF585A chr19 37646766 - CCDC3 chr10 13040512 - Exonic hg19 PRAD TCGA-V1-A9O5 5 Out-of-Frame Inter-chr q13.12 Transcription factor p13 Seq+ 12044 ChimerSeq FusionScan TCGA_RNA-Seq DMWD-KDM4C DMWD chr19 46294162 - KDM4C chr9 7128065 + Exonic hg19 PRAD TCGA-V1-A9O5 4 In-Frame Inter-chr q13.32 p24.1 Seq+ 12045 ChimerSeq FusionScan TCGA_RNA-Seq KLK2-FGFR2 KLK2 chr19 51376775 + FGFR2 chr10 123310973 - Exonic hg19 PRAD TCGA-V1-A9O5 4 In-Frame Inter-chr q13.33 q26.13 TK:FGFR Oncogene KB Pub Seq+ 12046 ChimerSeq FusionScan TCGA_RNA-Seq LSM14A-TDRD12 LSM14A chr19 34706566 + TDRD12 chr19 33263658 + Exonic hg19 PRAD TCGA-V1-A9O5 3 In-Frame Intra-chr q13.11 Seq+ 12047 ChimerSeq FusionScan TCGA_RNA-Seq KLK2-FGFR2 KLK2 chr19 51380014 + FGFR2 chr10 123310973 - Exonic hg19 PRAD TCGA-V1-A9O5 3 In-Frame Inter-chr q13.33 q26.13 TK:FGFR Oncogene KB Pub Seq+ 12048 ChimerSeq FusionScan TCGA_RNA-Seq KIAA2022-CXorf26 KIAA2022 chrX 74144717 - CXorf26 chrX 75393419 + Exonic hg19 PRAD TCGA-V1-A9O5 2 5'UTR-CDS Intra-chr q13.3 Seq+ 12049 ChimerSeq FusionScan TCGA_RNA-Seq TDRD12-TEAD2 TDRD12 chr19 33268135 + TEAD2 chr19 49854622 - Exonic hg19 PRAD TCGA-V1-A9O5 2 In-Frame Intra-chr q13.11 q13.33 Transcription factor Seq+ 12050 ChimerSeq FusionScan TCGA_RNA-Seq ZFAT-OC90 ZFAT chr8 135725087 - OC90 chr8 133058130 - Exonic hg19 PRAD TCGA-V1-A9O5 2 In-Frame Intra-chr q24.22 Transcription factor q24.22 12051 ChimerSeq FusionScan TCGA_RNA-Seq CCDC3-FXYD1 CCDC3 chr10 13040337 - FXYD1 chr19 35630979 + Exonic hg19 PRAD TCGA-V1-A9O5 2 CDS-5'UTR Inter-chr p13 q13.12 Seq+ 12052 ChimerSeq FusionScan TCGA_RNA-Seq GYS1-PLD3 GYS1 chr19 49488717 - PLD3 chr19 40880387 + Exonic hg19 PRAD TCGA-V1-A9O5 2 Out-of-Frame Intra-chr q13.33 q13.2 12053 ChimerSeq FusionScan TCGA_RNA-Seq MRAS-DIAPH3 MRAS chr3 138091918 + DIAPH3 chr13 60348957 - Exonic hg19 READ TCGA-AG-3601 2 In-Frame Inter-chr q22.3 q21.2 12054 ChimerSeq FusionScan TCGA_RNA-Seq KCTD13-TNFAIP1 KCTD13 chr16 29922298 - TNFAIP1 chr17 26671389 + Exonic hg19 READ TCGA-AG-3593 2 In-Frame Inter-chr p11.2 q11.2 12055 ChimerSeq FusionScan TCGA_RNA-Seq TGFBR2-DAG1 TGFBR2 chr3 30691952 + DAG1 chr3 49547851 + Exonic hg19 READ TCGA-AG-3593 2 CDS-5'UTR Intra-chr p24.1 Oncogene Tumor suppressor gene p21.31 12056 ChimerSeq FusionScan TCGA_RNA-Seq TPD52-EBAG9 TPD52 chr8 81083659 - EBAG9 chr8 110563038 + Exonic hg19 READ TCGA-AG-A00H 2 CDS-5'UTR Intra-chr q21.13 q23.2 12057 ChimerSeq FusionScan TCGA_RNA-Seq LRCH1-SPG20 LRCH1 chr13 47127838 + SPG20 chr13 36878769 - Exonic hg19 READ TCGA-AG-3594 3 Out-of-Frame Intra-chr q14.13 q13.3 Seq+ 12058 ChimerSeq FusionScan TCGA_RNA-Seq ADAM9-FLJ43860 ADAM9 chr8 38880844 + FLJ43860 chr8 142477648 - Exonic hg19 READ TCGA-AG-3594 2 Out-of-Frame Intra-chr 12059 ChimerSeq FusionScan TCGA_RNA-Seq TIMM17A-RBBP5 TIMM17A chr1 201934671 + RBBP5 chr1 205074296 - Exonic hg19 READ TCGA-AG-A011 2 Out-of-Frame Intra-chr q32.1 q32.1 12060 ChimerSeq FusionScan TCGA_RNA-Seq HSF1-BOP1 HSF1 chr8 145515556 + BOP1 chr8 145500292 - Exonic hg19 READ TCGA-AG-A02N 2 In-Frame Intra-chr q24.3 Transcription factor q24.3 12061 ChimerSeq FusionScan TCGA_RNA-Seq ZNRF3-PI4KA ZNRF3 chr22 29383189 + PI4KA chr22 21193019 - Exonic hg19 READ TCGA-AG-3578 4 In-Frame Intra-chr q12.1 q11.21 Seq+ 12062 ChimerSeq FusionScan TCGA_RNA-Seq PRCC-TFE3 PRCC chr1 156738031 + TFE3 chrX 48895967 - Exonic hg19 READ TCGA-AG-3605 6 In-Frame Inter-chr q23.1 p11.23 Oncogene Transcription factor KB Pub Seq+ 12063 ChimerSeq FusionScan TCGA_RNA-Seq ENTPD6-C20orf26 ENTPD6 chr20 25205953 + C20orf26 chr20 20269252 + Exonic hg19 READ TCGA-AG-3605 5 In-Frame Intra-chr p11.21 Seq+ 12064 ChimerSeq FusionScan TCGA_RNA-Seq JHDM1D-NDUFB2 JHDM1D chr7 139876543 - NDUFB2 chr7 140402665 + Exonic hg19 READ TCGA-AG-3605 2 In-Frame Intra-chr q34 12065 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-STAT3 TBL1XR1 chr3 176914908 - STAT3 chr17 40500535 - Exonic hg19 READ TCGA-AG-3731 8 5'UTR-5'UTR Inter-chr q26.32 q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 12066 ChimerSeq FusionScan TCGA_RNA-Seq GPAA1-GRINA GPAA1 chr8 145139233 + GRINA chr8 145065367 + Exonic hg19 READ TCGA-AG-3731 6 CDS-5'UTR Intra-chr q24.3 q24.3 Seq+ 12067 ChimerSeq FusionScan TCGA_RNA-Seq SMAD6-FAM96A SMAD6 chr15 67008836 + FAM96A chr15 64367736 - Exonic hg19 READ TCGA-AG-3731 3 In-Frame Intra-chr q22.31 q22.31 Seq+ 12068 ChimerSeq FusionScan TCGA_RNA-Seq SSH1-SVOP SSH1 chr12 109246413 - SVOP chr12 109332731 - Exonic hg19 READ TCGA-AG-3731 3 Out-of-Frame Intra-chr q24.11 q24.11 Seq+ 12069 ChimerSeq FusionScan TCGA_RNA-Seq TCF7L2-VTI1A TCF7L2 chr10 114799885 + VTI1A chr10 114286845 + Exonic hg19 READ TCGA-AG-3731 2 In-Frame Intra-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q25.2 Seq+ 12070 ChimerSeq FusionScan TCGA_RNA-Seq SMAD6-FAM96A SMAD6 chr15 67008836 + FAM96A chr15 64373350 - Exonic hg19 READ TCGA-AG-3731 2 In-Frame Intra-chr q22.31 q22.31 Seq+ 12071 ChimerSeq FusionScan TCGA_RNA-Seq SAE1-GRIN2D SAE1 chr19 47634285 + GRIN2D chr19 48945025 + Exonic hg19 READ TCGA-AG-3731 2 In-Frame Intra-chr q13.32 q13.33 Seq+ 12072 ChimerSeq FusionScan TCGA_RNA-Seq MRPL37-SLC52A2 MRPL37 chr1 54671083 + SLC52A2 chr8 145584462 + Exonic hg19 READ TCGA-AG-3731 2 Out-of-Frame Inter-chr p32.3 q24.3 12073 ChimerSeq FusionScan TCGA_RNA-Seq HMG20B-UCKL1 HMG20B chr19 3577105 + UCKL1 chr20 62572561 - Exonic hg19 READ TCGA-AG-A00Y 2 Out-of-Frame Inter-chr p13.3 Transcription factor q13.33 12074 ChimerSeq FusionScan TCGA_RNA-Seq FBXL20-GRB7 FBXL20 chr17 37557613 - GRB7 chr17 37898504 + Exonic hg19 READ TCGA-AF-A56L 9 Out-of-Frame Intra-chr q12 q12 Seq+ 12075 ChimerSeq FusionScan TCGA_RNA-Seq TNS4-FBXL20 TNS4 chr17 38657785 - FBXL20 chr17 37499494 - Exonic hg19 READ TCGA-AF-A56L 5 5'UTR-CDS Intra-chr q21.2 q12 Seq+ 12076 ChimerSeq FusionScan TCGA_RNA-Seq WIPF2-CACNB1 WIPF2 chr17 38375744 + CACNB1 chr17 37343854 - Exonic hg19 READ TCGA-AF-A56L 3 5'UTR-CDS Intra-chr q21.2 q12 Seq+ 12077 ChimerSeq FusionScan TCGA_RNA-Seq TOP2A-IKZF3 TOP2A chr17 38567360 - IKZF3 chr17 37922746 - Exonic hg19 READ TCGA-AF-A56L 3 Out-of-Frame Intra-chr q21.2 q21.1 Tumor suppressor gene Transcription factor Seq+ 12078 ChimerSeq FusionScan TCGA_RNA-Seq TOP2A-IKZF3 TOP2A chr17 38567605 - IKZF3 chr17 37922746 - Exonic hg19 READ TCGA-AF-A56L 2 Out-of-Frame Intra-chr q21.2 q21.1 Tumor suppressor gene Transcription factor Seq+ 12079 ChimerSeq FusionScan TCGA_RNA-Seq WIPF2-KRT19 WIPF2 chr17 38375744 + KRT19 chr17 39681525 - Exonic hg19 READ TCGA-AF-A56L 2 5'UTR-CDS Intra-chr q21.2 q21.2 Tumor suppressor gene 12080 ChimerSeq FusionScan TCGA_RNA-Seq TARDBP-EIF4A3 TARDBP chr1 11080656 + EIF4A3 chr17 78113939 - Exonic hg19 READ TCGA-DC-6157 2 In-Frame Inter-chr p36.22 q25.3 12081 ChimerSeq FusionScan TCGA_RNA-Seq NUPL2-YBX1 NUPL2 chr7 23226765 + YBX1 chr1 43149073 + Exonic hg19 READ TCGA-DC-6157 2 In-Frame Inter-chr p15.3 p34.2 Transcription factor 12082 ChimerSeq FusionScan TCGA_RNA-Seq ACVR1B-GRASP ACVR1B chr12 52345618 + GRASP chr12 52402973 + Exonic hg19 READ TCGA-CL-4957 2 Out-of-Frame Intra-chr q13.13 Oncogene q13.13 12083 ChimerSeq FusionScan TCGA_RNA-Seq SOCS7-MIEN1 SOCS7 chr17 36523933 + MIEN1 chr17 37886544 - Exonic hg19 READ TCGA-EI-6509 15 Out-of-Frame Intra-chr q12 q12 Seq+ 12084 ChimerSeq FusionScan TCGA_RNA-Seq MRPL45-ARHGAP23 MRPL45 chr17 36455434 + ARHGAP23 chr17 36614345 + Exonic hg19 READ TCGA-EI-6509 7 Out-of-Frame Intra-chr q12 q12 Seq+ 12085 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP23-CCR7 ARHGAP23 chr17 36584792 + CCR7 chr17 38715194 - Exonic hg19 READ TCGA-EI-6509 2 Out-of-Frame Intra-chr q12 q21.2 Seq+ 12086 ChimerSeq FusionScan TCGA_RNA-Seq IKZF3-SMARCE1 IKZF3 chr17 37985639 - SMARCE1 chr17 38788619 - Exonic hg19 READ TCGA-EI-6509 2 In-Frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.2 12087 ChimerSeq FusionScan TCGA_RNA-Seq NFAT5-CRYM NFAT5 chr16 69602451 + CRYM chr16 21281212 - Exonic hg19 READ TCGA-AH-6549 3 Out-of-Frame Intra-chr q22.1 Transcription factor Seq+ 12088 ChimerSeq FusionScan TCGA_RNA-Seq SEPT10-TRUB2 SEPT10 chr2 110303626 - TRUB2 chr9 131084009 - Exonic hg19 READ TCGA-DY-A1DF 2 Out-of-Frame Inter-chr q13 q34.11 12089 ChimerSeq FusionScan TCGA_RNA-Seq RBL2-TOP1MT RBL2 chr16 53513137 + TOP1MT chr8 144413509 - Exonic hg19 READ TCGA-AG-3598 2 Out-of-Frame Inter-chr q12.2 Tumor suppressor gene q24.3 12090 ChimerSeq FusionScan TCGA_RNA-Seq ARSG-ZBTB49 ARSG chr17 66397591 + ZBTB49 chr4 4322366 + Exonic hg19 READ TCGA-AG-3612 2 In-Frame Inter-chr q24.2 p16.3 Transcription factor 12091 ChimerSeq FusionScan TCGA_RNA-Seq BRI3BP-MARS BRI3BP chr12 125478549 + MARS chr12 57905480 + Exonic hg19 READ TCGA-AG-4015 3 In-Frame Intra-chr q24.31 q13.3 Seq+ 12092 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF38-PPA2 ARHGEF38 chr4 106474118 + PPA2 chr4 106320321 - Exonic hg19 READ TCGA-DC-6154 2 In-Frame Intra-chr q24 q24 Seq+ 12093 ChimerSeq FusionScan TCGA_RNA-Seq WAC-C10orf76 WAC chr10 28824686 + C10orf76 chr10 103699695 - Exonic hg19 READ TCGA-AG-3887 2 In-Frame Intra-chr p12.1 q24.32 12094 ChimerSeq FusionScan TCGA_RNA-Seq GIGYF2-C6orf52 GIGYF2 chr2 233660931 + C6orf52 chr6 10671831 - Exonic hg19 READ TCGA-AH-6544 2 In-Frame Inter-chr q37.1 p24.2 Seq+ 12095 ChimerSeq FusionScan TCGA_RNA-Seq SMARCE1-RARA SMARCE1 chr17 38792182 - RARA chr17 38511514 + Exonic hg19 READ TCGA-AH-6643 7 In-Frame Intra-chr q21.2 q21.2 Oncogene Transcription factor Seq+ 12096 ChimerSeq FusionScan TCGA_RNA-Seq ATXN1-DTNBP1 ATXN1 chr6 16486202 - DTNBP1 chr6 15533626 - Exonic hg19 READ TCGA-F5-6465 2 5'UTR-CDS Intra-chr p22.3 p22.3 Seq+ 12097 ChimerSeq FusionScan TCGA_RNA-Seq UBA2-ZNF146 UBA2 chr19 34955036 + ZNF146 chr19 36726560 + Exonic hg19 READ TCGA-AG-3892 4 CDS-5'UTR Intra-chr q13.11 q13.12 Transcription factor Seq+ 12098 ChimerSeq FusionScan TCGA_RNA-Seq TANC1-PKP4 TANC1 chr2 159825294 + PKP4 chr2 159535092 + Exonic hg19 READ TCGA-AG-3892 3 5'UTR-CDS Intra-chr q24.2 q24.1 Seq+ 12099 ChimerSeq FusionScan TCGA_RNA-Seq C19orf47-SCN1B C19orf47 chr19 40847745 - SCN1B chr19 35523431 + Exonic hg19 READ TCGA-AG-3892 2 In-Frame Intra-chr q13.2 q13.11 Seq+ 12100 ChimerSeq FusionScan TCGA_RNA-Seq LARP4-NUP98 LARP4 chr12 50848200 + NUP98 chr11 3727857 - Exonic hg19 READ TCGA-AG-3892 2 Out-of-Frame Inter-chr q13.12 p15.4 Oncogene Tumor suppressor gene 12101 ChimerSeq FusionScan TCGA_RNA-Seq WDR59-UBAP2L WDR59 chr16 75018861 - UBAP2L chr1 154232423 + Exonic hg19 READ TCGA-AG-3892 2 In-Frame Inter-chr q23.1 q21.3 12102 ChimerSeq FusionScan TCGA_RNA-Seq CKMT1A-PDIA3 CKMT1A chr15 43986397 + PDIA3 chr15 44046021 + Exonic hg19 READ TCGA-EF-5831 5 In-Frame Intra-chr q15.3 q15.3 12103 ChimerSeq FusionScan TCGA_RNA-Seq CKMT1B-PDIA3 CKMT1B chr15 43886565 + PDIA3 chr15 44046021 + Exonic hg19 READ TCGA-EF-5831 5 In-Frame Intra-chr q15.3 q15.3 12104 ChimerSeq FusionScan TCGA_RNA-Seq POLR1A-CTNNA2 POLR1A chr2 86265822 - CTNNA2 chr2 80831198 + Exonic hg19 READ TCGA-EF-5831 3 In-Frame Intra-chr p11.2 p12 Tumor suppressor gene Seq+ 12105 ChimerSeq FusionScan TCGA_RNA-Seq GNA13-SLC39A11 GNA13 chr17 63049619 - SLC39A11 chr17 71027853 - Exonic hg19 READ TCGA-EF-5831 2 In-Frame Intra-chr q24.1 q25.1 Seq+ 12106 ChimerSeq FusionScan TCGA_RNA-Seq RPS19-CEACAM5 RPS19 chr19 42365281 + CEACAM5 chr19 42213598 + Exonic hg19 READ TCGA-EI-6506 3 In-Frame Intra-chr q13.2 q13.2 Seq+ 12107 ChimerSeq FusionScan TCGA_RNA-Seq YEATS4-CPSF6 YEATS4 chr12 69764755 + CPSF6 chr12 69663291 + Exonic hg19 READ TCGA-EI-6506 2 CDS-3'UTR Intra-chr q15 q15 Seq+ 12108 ChimerSeq FusionScan TCGA_RNA-Seq MTF2-ZNF644 MTF2 chr1 93545088 + ZNF644 chr1 91447927 - Exonic hg19 READ TCGA-CL-5918 2 5'UTR-5'UTR Intra-chr p22.1 Transcription factor p22.2 Transcription factor 12109 ChimerSeq FusionScan TCGA_RNA-Seq GMEB1-TRNAU1AP GMEB1 chr1 28995351 + TRNAU1AP chr1 28897687 + Exonic hg19 READ TCGA-AG-A036 10 5'UTR-5'UTR Intra-chr p35.3 Transcription factor p35.3 Seq+ 12110 ChimerSeq FusionScan TCGA_RNA-Seq UNC45A-IQGAP1 UNC45A chr15 91483703 + IQGAP1 chr15 91029261 + Exonic hg19 READ TCGA-AG-A036 8 In-Frame Intra-chr q26.1 q26.1 Seq+ 12111 ChimerSeq FusionScan TCGA_RNA-Seq SFMBT1-TKT SFMBT1 chr3 53079831 - TKT chr3 53276258 - Exonic hg19 READ TCGA-AG-A036 6 5'UTR-CDS Intra-chr p21.1 p21.1 Tumor suppressor gene Seq+ 12112 ChimerSeq FusionScan TCGA_RNA-Seq USP32-NPTN USP32 chr17 58469242 - NPTN chr15 73866136 - Exonic hg19 READ TCGA-AG-A036 5 In-Frame Inter-chr q23.2 q24.1 Seq+ 12113 ChimerSeq FusionScan TCGA_RNA-Seq ANLN-EEPD1 ANLN chr7 36459088 + EEPD1 chr7 36320723 + Exonic hg19 READ TCGA-AG-A036 5 In-Frame Intra-chr p14.2 p14.2 Seq+ 12114 ChimerSeq FusionScan TCGA_RNA-Seq RNF214-PAFAH1B2 RNF214 chr11 117115301 + PAFAH1B2 chr11 117042337 + Exonic hg19 READ TCGA-AG-A036 4 In-Frame Intra-chr q23.3 q23.3 Seq+ 12115 ChimerSeq FusionScan TCGA_RNA-Seq GMEB1-TRNAU1AP GMEB1 chr1 28995351 + TRNAU1AP chr1 28898378 + Exonic hg19 READ TCGA-AG-A036 3 5'UTR-5'UTR Intra-chr p35.3 Transcription factor p35.3 Seq+ 12116 ChimerSeq FusionScan TCGA_RNA-Seq PDIA5-CASR PDIA5 chr3 122829851 + CASR chr3 121972794 + Exonic hg19 READ TCGA-AG-A036 3 5'UTR-5'UTR Intra-chr q21.1 q13.33 Seq+ 12117 ChimerSeq FusionScan TCGA_RNA-Seq PIK3R3-RDH10 PIK3R3 chr1 46597518 - RDH10 chr8 74209428 + Exonic hg19 READ TCGA-AG-A036 2 In-Frame Inter-chr p34.1 q21.11 Seq+ 12118 ChimerSeq FusionScan TCGA_RNA-Seq NUMA1-ZNF705D NUMA1 chr11 71780887 - ZNF705D chr8 11965631 + Exonic hg19 READ TCGA-AG-A036 2 5'UTR-5'UTR Inter-chr q13.4 Oncogene p23.1 Transcription factor 12119 ChimerSeq FusionScan TCGA_RNA-Seq FAM73B-SRRM2 FAM73B chr9 131830611 + SRRM2 chr16 2820352 + Exonic hg19 READ TCGA-AG-A036 2 Out-of-Frame Inter-chr p13.3 12120 ChimerSeq FusionScan TCGA_RNA-Seq NUBPL-APP NUBPL chr14 32142780 + APP chr21 27462388 - Exonic hg19 READ TCGA-AG-A036 2 In-Frame Inter-chr q12 q21.3 12121 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF1-UCKL1 ARHGEF1 chr19 42400555 + UCKL1 chr20 62572561 - Exonic hg19 READ TCGA-G5-6572 2 In-Frame Inter-chr q13.2 q13.33 Seq+ 12122 ChimerSeq FusionScan TCGA_RNA-Seq DANCR-FAF1 DANCR chr4 53579126 + FAF1 chr1 51061888 - Exonic hg19 READ TCGA-EF-5830 2 5'UTR-CDS Inter-chr q12 p32.3 12123 ChimerSeq FusionScan TCGA_RNA-Seq MAL2-B2M MAL2 chr8 120220844 + B2M chr15 45007620 + Exonic hg19 READ TCGA-EF-5830 2 Out-of-Frame Inter-chr q24.12 Oncogene Seq+ 12124 ChimerSeq FusionScan TCGA_RNA-Seq ASAP1-EFR3A ASAP1 chr8 131164981 - EFR3A chr8 132952745 + Exonic hg19 READ TCGA-AG-4022 2 Out-of-Frame Intra-chr q24.22 q24.22 12125 ChimerSeq FusionScan TCGA_RNA-Seq FNDC3B-C3orf58 FNDC3B chr3 171757561 + C3orf58 chr3 143704384 + Exonic hg19 READ TCGA-EI-6882 2 5'UTR-CDS Intra-chr q26.31 q24 12126 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R2A-BNIP3L PPP2R2A chr8 26151256 + BNIP3L chr8 26248758 + Exonic hg19 READ TCGA-AF-6136 2 In-Frame Intra-chr p21.2 p21.2 Tumor suppressor gene Seq+ 12127 ChimerSeq FusionScan TCGA_RNA-Seq CBFA2T2-EIF2S2 CBFA2T2 chr20 32078107 + EIF2S2 chr20 32693351 - Exonic hg19 READ TCGA-AH-6903 2 Out-of-Frame Intra-chr q11.21 q11.22 Seq+ 12128 ChimerSeq FusionScan TCGA_RNA-Seq ANO9-CHMP1A ANO9 chr11 428087 - CHMP1A chr16 89713739 - Exonic hg19 READ TCGA-DY-A1DD 2 Out-of-Frame Inter-chr p15.5 q24.3 12129 ChimerSeq FusionScan TCGA_RNA-Seq FRG1-NSUN2 FRG1 chr4 190883087 + NSUN2 chr5 6607025 - Exonic hg19 READ TCGA-DY-A1DD 2 In-Frame Inter-chr p15.31 12130 ChimerSeq FusionScan TCGA_RNA-Seq BACE2-FAM3B BACE2 chr21 42629253 + FAM3B chr21 42710304 + Exonic hg19 READ TCGA-F5-6812 2 In-Frame Intra-chr q22.2 q22.3 Seq+ 12131 ChimerSeq FusionScan TCGA_RNA-Seq TRIM33-PIP5K1A TRIM33 chr1 115053171 - PIP5K1A chr1 151196723 + Exonic hg19 READ TCGA-DC-6160 2 In-Frame Intra-chr p13.2 Oncogene q21.3 12132 ChimerSeq FusionScan TCGA_RNA-Seq HELLS-CDH23 HELLS chr10 96336562 + CDH23 chr10 73434868 + Exonic hg19 READ TCGA-AG-A020 2 In-Frame Intra-chr q23.33 q22.1 Seq+ 12133 ChimerSeq FusionScan TCGA_RNA-Seq RPS27A-MIR4426 RPS27A chr2 55462098 + MIR4426 chr2 55461299 + Exonic hg19 READ TCGA-F5-6813 2 CDS-5'UTR Intra-chr p16.1 q31.2 12134 ChimerSeq FusionScan TCGA_RNA-Seq GMDS-TMTC2 GMDS chr6 2245554 - TMTC2 chr12 83324209 + Exonic hg19 READ TCGA-BM-6198 4 Out-of-Frame Inter-chr p25.3 q21.31 Seq+ 12135 ChimerSeq FusionScan TCGA_RNA-Seq C12orf4-HDLBP C12orf4 chr12 4647574 - HDLBP chr2 242192450 - Exonic hg19 READ TCGA-BM-6198 2 5'UTR-CDS Inter-chr p13.32 q37.3 12136 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF1-RPS19 ARHGEF1 chr19 42397374 + RPS19 chr19 42373100 + Exonic hg19 READ TCGA-F5-6814 4 Out-of-Frame Intra-chr q13.2 q13.2 Seq+ 12137 ChimerSeq FusionScan TCGA_RNA-Seq RNF130-MGAT4B RNF130 chr5 179467452 - MGAT4B chr5 179226636 - Exonic hg19 READ TCGA-F5-6814 3 In-Frame Intra-chr q35.3 Seq+ 12138 ChimerSeq FusionScan TCGA_RNA-Seq DANCR-SERINC2 DANCR chr4 53579126 + SERINC2 chr1 31905813 + Exonic hg19 READ TCGA-F5-6814 3 5'UTR-CDS Inter-chr q12 p35.2 Seq+ 12139 ChimerSeq FusionScan TCGA_RNA-Seq DTX2-SRRT DTX2 chr7 76110094 + SRRT chr7 100483867 + Exonic hg19 READ TCGA-CI-6621 3 Out-of-Frame Intra-chr q22.1 Seq+ 12140 ChimerSeq FusionScan TCGA_RNA-Seq ATP6V0A1-RARA ATP6V0A1 chr17 40642655 + RARA chr17 38487108 + Exonic hg19 READ TCGA-AG-3581 2 CDS-5'UTR Intra-chr q21.2 q21.2 Oncogene Transcription factor Seq+ 12141 ChimerSeq FusionScan TCGA_RNA-Seq CRNDE-NCOA6 CRNDE chr16 54957496 - NCOA6 chr20 33338322 - Exonic hg19 READ TCGA-AG-3581 2 3'UTR-CDS Inter-chr q12.2 q11.22 12142 ChimerSeq FusionScan TCGA_RNA-Seq C2CD3-VPS37C C2CD3 chr11 73753098 - VPS37C chr11 60906307 - Exonic hg19 READ TCGA-DC-6158 2 CDS-5'UTR Intra-chr q13.4 q12.2 Seq+ 12143 ChimerSeq FusionScan TCGA_RNA-Seq PIAS1-GNAI3 PIAS1 chr15 68346688 + GNAI3 chr1 110116358 + Exonic hg19 READ TCGA-DY-A0XA 3 Out-of-Frame Inter-chr q23 Tumor suppressor gene p13.3 12144 ChimerSeq FusionScan TCGA_RNA-Seq MED1-SRCIN1 MED1 chr17 37595417 - SRCIN1 chr17 36720549 - Exonic hg19 READ TCGA-AG-3898 3 Out-of-Frame Intra-chr q12 Tumor suppressor gene q12 Seq+ 12145 ChimerSeq FusionScan TCGA_RNA-Seq MYBL2-C20orf152 MYBL2 chr20 42328684 + C20orf152 chr20 34582959 + Exonic hg19 READ TCGA-AG-3898 2 In-Frame Intra-chr q13.12 Transcription factor 12146 ChimerSeq FusionScan TCGA_RNA-Seq DPEP1-TCF25 DPEP1 chr16 89696922 + TCF25 chr16 89976998 + Exonic hg19 READ TCGA-CI-6622 2 In-Frame Intra-chr q24.3 q24.3 Seq+ 12147 ChimerSeq FusionScan TCGA_RNA-Seq ITPR3-PPIL1 ITPR3 chr6 33589468 + PPIL1 chr6 36839648 - Exonic hg19 READ TCGA-AG-3587 2 In-Frame Intra-chr p21.31 p21.2 12148 ChimerSeq FusionScan TCGA_RNA-Seq RAD21-EIF3H RAD21 chr8 117886849 - EIF3H chr8 117671219 - Exonic hg19 READ TCGA-DY-A1DE 5 5'UTR-CDS Intra-chr q24.11 q24.11 Seq+ 12149 ChimerSeq FusionScan TCGA_RNA-Seq RABGAP1L-CACYBP RABGAP1L chr1 174846743 + CACYBP chr1 174973749 + Exonic hg19 READ TCGA-DY-A1DE 3 In-Frame Intra-chr q25.1 q25.1 Seq+ 12150 ChimerSeq FusionScan TCGA_RNA-Seq RHOA-TMEM111 RHOA chr3 49405860 - TMEM111 chr3 10011485 - Exonic hg19 READ TCGA-EI-6510 11 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene Seq+ 12151 ChimerSeq FusionScan TCGA_RNA-Seq RHOA-TMEM111 RHOA chr3 49405860 - TMEM111 chr3 10005881 - Exonic hg19 READ TCGA-EI-6510 4 Out-of-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene Seq+ 12152 ChimerSeq FusionScan TCGA_RNA-Seq CD2AP-SLC25A13 CD2AP chr6 47501491 + SLC25A13 chr7 95800836 - Exonic hg19 READ TCGA-EI-6510 4 In-Frame Inter-chr p12.3 q21.3 Seq+ 12153 ChimerSeq FusionScan TCGA_RNA-Seq TMEM111-RHOA TMEM111 chr3 10012265 - RHOA chr3 49400059 - Exonic hg19 READ TCGA-EI-6510 2 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene Seq+ 12154 ChimerSeq FusionScan TCGA_RNA-Seq MYH9-SORCS1 MYH9 chr22 36701078 - SORCS1 chr10 108489872 - Exonic hg19 READ TCGA-EI-7004 3 Out-of-Frame Inter-chr q12.3 Oncogene Tumor suppressor gene q25.1 Seq+ 12155 ChimerSeq FusionScan TCGA_RNA-Seq C21orf58-IFNGR2 C21orf58 chr21 47731369 - IFNGR2 chr21 34804483 + Exonic hg19 READ TCGA-F5-6810 3 Out-of-Frame Intra-chr q22.3 Seq+ 12156 ChimerSeq FusionScan TCGA_RNA-Seq NOTCH3-SPECC1 NOTCH3 chr19 15297688 - SPECC1 chr17 20107645 + Exonic hg19 READ TCGA-F5-6810 2 In-Frame Inter-chr p13.12 Oncogene Tumor suppressor gene p11.2 Seq+ 12157 ChimerSeq FusionScan TCGA_RNA-Seq RHOG-NUP98 RHOG chr11 3862123 - NUP98 chr11 3720578 - Exonic hg19 READ TCGA-AG-A026 2 5'UTR-CDS Intra-chr p15.4 p15.4 Oncogene Tumor suppressor gene Seq+ 12158 ChimerSeq FusionScan TCGA_RNA-Seq CAAP1-COG5 CAAP1 chr9 26861063 - COG5 chr7 107053077 - Exonic hg19 READ TCGA-AH-6547 2 In-Frame Inter-chr p21.2 12159 ChimerSeq FusionScan TCGA_RNA-Seq PTPRF-DHRS4 PTPRF chr1 44064584 + DHRS4 chr14 24429110 + Exonic hg19 READ TCGA-AF-2693 5 In-Frame Inter-chr p34.2 q11.2 Seq+ 12160 ChimerSeq FusionScan TCGA_RNA-Seq LRCH1-NUDT15 LRCH1 chr13 47127838 + NUDT15 chr13 48615055 + Exonic hg19 READ TCGA-AF-2693 2 Out-of-Frame Intra-chr q14.13 q14.2 Seq+ 12161 ChimerSeq FusionScan TCGA_RNA-Seq CAPZA1-EFCAB1 CAPZA1 chr1 113162505 + EFCAB1 chr8 49643203 - Exonic hg19 READ TCGA-AG-A02G 3 Out-of-Frame Inter-chr p13.2 q11.21 Seq+ 12162 ChimerSeq FusionScan TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128505576 - RSPO3 chr6 127469792 + Exonic hg19 READ TCGA-G5-6233 4 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 12163 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD17-RPL9 ANKRD17 chr4 74123992 - RPL9 chr4 39458158 - Exonic hg19 READ TCGA-G5-6233 2 In-Frame Intra-chr q13.3 p14 12164 ChimerSeq FusionScan TCGA_RNA-Seq PI4KA-BCAT1 PI4KA chr22 21212857 - BCAT1 chr12 25054819 - Exonic hg19 READ TCGA-AG-3999 3 In-Frame Inter-chr q11.21 p12.1 Seq+ 12165 ChimerSeq FusionScan TCGA_RNA-Seq PTPRK-IL20RA PTPRK chr6 128841403 - IL20RA chr6 137338240 - Exonic hg19 READ TCGA-EI-7002 2 In-Frame Intra-chr Tumor suppressor gene q23.3 Seq+ 12166 ChimerSeq FusionScan TCGA_RNA-Seq LHFPL2-PTPRK LHFPL2 chr5 77805606 - PTPRK chr6 128411137 - Exonic hg19 READ TCGA-EI-7002 2 In-Frame Inter-chr q14.1 Tumor suppressor gene Seq+ 12167 ChimerSeq FusionScan TCGA_RNA-Seq PTPRK-RPS15A PTPRK chr6 128505576 - RPS15A chr16 18800440 - Exonic hg19 READ TCGA-AG-3586 2 CDS-5'UTR Inter-chr Tumor suppressor gene p12.3 12168 ChimerSeq FusionScan TCGA_RNA-Seq TNKS-MSRA TNKS chr8 9473187 + MSRA chr8 10065342 + Exonic hg19 READ TCGA-EI-6885 2 In-Frame Intra-chr p23.1 p23.1 Seq+ 12169 ChimerSeq FusionScan TCGA_RNA-Seq GOLIM4-PRDX1 GOLIM4 chr3 167759179 - PRDX1 chr1 45977086 - Exonic hg19 READ TCGA-EI-6885 2 Out-of-Frame Inter-chr q26.2 p34.1 Seq+ 12170 ChimerSeq FusionScan TCGA_RNA-Seq MIEN1-TEX2 MIEN1 chr17 37886446 - TEX2 chr17 62238293 - Exonic hg19 READ TCGA-AG-3902 2 In-Frame Intra-chr q12 q23.3 Seq+ 12171 ChimerSeq FusionScan TCGA_RNA-Seq PCMTD1-UBB PCMTD1 chr8 52811489 - UBB chr17 16285215 + Exonic hg19 READ TCGA-F5-6863 2 5'UTR-5'UTR Inter-chr q11.23 p11.2 12172 ChimerSeq FusionScan TCGA_RNA-Seq RRBP1-MACROD2 RRBP1 chr20 17662672 - MACROD2 chr20 15843389 + Exonic hg19 READ TCGA-AG-3599 2 5'UTR-5'UTR Intra-chr p12.1 p12.1 Seq+ 12173 ChimerSeq FusionScan TCGA_RNA-Seq FAM73B-SRRM2 FAM73B chr9 131830611 + SRRM2 chr16 2820352 + Exonic hg19 READ TCGA-AG-A036 2 Out-of-Frame Inter-chr p13.3 12174 ChimerSeq FusionScan TCGA_RNA-Seq NUBPL-APP NUBPL chr14 32142780 + APP chr21 27462388 - Exonic hg19 READ TCGA-AG-A036 2 In-Frame Inter-chr q12 q21.3 12175 ChimerSeq FusionScan TCGA_RNA-Seq BACE2-FAM3B BACE2 chr21 42629253 + FAM3B chr21 42710304 + Exonic hg19 READ TCGA-F5-6812 2 In-Frame Intra-chr q22.2 q22.3 Seq+ 12176 ChimerSeq FusionScan TCGA_RNA-Seq TIMM17A-RBBP5 TIMM17A chr1 201934671 + RBBP5 chr1 205074296 - Exonic hg19 READ TCGA-AG-A011 2 Out-of-Frame Intra-chr q32.1 q32.1 12177 ChimerSeq FusionScan TCGA_RNA-Seq HELLS-CDH23 HELLS chr10 96336562 + CDH23 chr10 73434868 + Exonic hg19 READ TCGA-AG-A020 2 In-Frame Intra-chr q23.33 q22.1 Seq+ 12178 ChimerSeq FusionScan TCGA_RNA-Seq RAD21-EIF3H RAD21 chr8 117886849 - EIF3H chr8 117671219 - Exonic hg19 READ TCGA-DY-A1DE 5 5'UTR-CDS Intra-chr q24.11 q24.11 Seq+ 12179 ChimerSeq FusionScan TCGA_RNA-Seq RABGAP1L-CACYBP RABGAP1L chr1 174846743 + CACYBP chr1 174973749 + Exonic hg19 READ TCGA-DY-A1DE 3 In-Frame Intra-chr q25.1 q25.1 Seq+ 12180 ChimerSeq FusionScan TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128505576 - RSPO3 chr6 127469792 + Exonic hg19 READ TCGA-G5-6233 4 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 12181 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD17-RPL9 ANKRD17 chr4 74123992 - RPL9 chr4 39458158 - Exonic hg19 READ TCGA-G5-6233 2 In-Frame Intra-chr q13.3 p14 12182 ChimerSeq FusionScan TCGA_RNA-Seq ANO9-CHMP1A ANO9 chr11 428087 - CHMP1A chr16 89713739 - Exonic hg19 READ TCGA-DY-A1DD 2 Out-of-Frame Inter-chr p15.5 q24.3 12183 ChimerSeq FusionScan TCGA_RNA-Seq FRG1-NSUN2 FRG1 chr4 190883087 + NSUN2 chr5 6607025 - Exonic hg19 READ TCGA-DY-A1DD 2 In-Frame Inter-chr p15.31 12184 ChimerSeq FusionScan TCGA_RNA-Seq PIAS1-GNAI3 PIAS1 chr15 68346688 + GNAI3 chr1 110116358 + Exonic hg19 READ TCGA-DY-A0XA 3 Out-of-Frame Inter-chr q23 Tumor suppressor gene p13.3 12185 ChimerSeq FusionScan TCGA_RNA-Seq HSF1-BOP1 HSF1 chr8 145515556 + BOP1 chr8 145500292 - Exonic hg19 READ TCGA-AG-A02N 2 In-Frame Intra-chr q24.3 Transcription factor q24.3 12186 ChimerSeq FusionScan TCGA_RNA-Seq SEPT10-TRUB2 SEPT10 chr2 110303626 - TRUB2 chr9 131084009 - Exonic hg19 READ TCGA-DY-A1DF 2 Out-of-Frame Inter-chr q13 q34.11 12187 ChimerSeq FusionScan TCGA_RNA-Seq CAPZA1-EFCAB1 CAPZA1 chr1 113162505 + EFCAB1 chr8 49643203 - Exonic hg19 READ TCGA-AG-A02G 3 Out-of-Frame Inter-chr p13.2 q11.21 Seq+ 12188 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF1-UCKL1 ARHGEF1 chr19 42400555 + UCKL1 chr20 62572561 - Exonic hg19 READ TCGA-G5-6572 2 In-Frame Inter-chr q13.2 q13.33 Seq+ 12189 ChimerSeq FusionScan TCGA_RNA-Seq TPD52-EBAG9 TPD52 chr8 81083659 - EBAG9 chr8 110563038 + Exonic hg19 READ TCGA-AG-A00H 2 CDS-5'UTR Intra-chr q21.13 q23.2 12190 ChimerSeq FusionScan TCGA_RNA-Seq HMG20B-UCKL1 HMG20B chr19 3577105 + UCKL1 chr20 62572561 - Exonic hg19 READ TCGA-AG-A00Y 2 Out-of-Frame Inter-chr p13.3 Transcription factor q13.33 12191 ChimerSeq FusionScan TCGA_RNA-Seq ATXN1-DTNBP1 ATXN1 chr6 16486202 - DTNBP1 chr6 15533626 - Exonic hg19 READ TCGA-F5-6465 2 5'UTR-CDS Intra-chr p22.3 p22.3 Seq+ 12192 ChimerSeq FusionScan TCGA_RNA-Seq RPS27A-MIR4426 RPS27A chr2 55462098 + MIR4426 chr2 55461299 + Exonic hg19 READ TCGA-F5-6813 2 CDS-5'UTR Intra-chr p16.1 q31.2 12193 ChimerSeq FusionScan TCGA_RNA-Seq C21orf58-IFNGR2 C21orf58 chr21 47731369 - IFNGR2 chr21 34804483 + Exonic hg19 READ TCGA-F5-6810 3 Out-of-Frame Intra-chr q22.3 Seq+ 12194 ChimerSeq FusionScan TCGA_RNA-Seq NOTCH3-SPECC1 NOTCH3 chr19 15297688 - SPECC1 chr17 20107645 + Exonic hg19 READ TCGA-F5-6810 2 In-Frame Inter-chr p13.12 Oncogene Tumor suppressor gene p11.2 Seq+ 12195 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF1-RPS19 ARHGEF1 chr19 42397374 + RPS19 chr19 42373100 + Exonic hg19 READ TCGA-F5-6814 4 Out-of-Frame Intra-chr q13.2 q13.2 Seq+ 12196 ChimerSeq FusionScan TCGA_RNA-Seq DANCR-SERINC2 DANCR chr4 53579126 + SERINC2 chr1 31905813 + Exonic hg19 READ TCGA-F5-6814 3 5'UTR-CDS Inter-chr q12 p35.2 Seq+ 12197 ChimerSeq FusionScan TCGA_RNA-Seq RNF130-MGAT4B RNF130 chr5 179467452 - MGAT4B chr5 179226636 - Exonic hg19 READ TCGA-F5-6814 3 In-Frame Intra-chr q35.3 Seq+ 12198 ChimerSeq FusionScan TCGA_RNA-Seq PCMTD1-UBB PCMTD1 chr8 52811489 - UBB chr17 16285215 + Exonic hg19 READ TCGA-F5-6863 2 5'UTR-5'UTR Inter-chr q11.23 p11.2 12199 ChimerSeq FusionScan TCGA_RNA-Seq FBXL20-GRB7 FBXL20 chr17 37557613 - GRB7 chr17 37898504 + Exonic hg19 READ TCGA-AF-A56L 9 Out-of-Frame Intra-chr q12 q12 Seq+ 12200 ChimerSeq FusionScan TCGA_RNA-Seq TNS4-FBXL20 TNS4 chr17 38657785 - FBXL20 chr17 37499494 - Exonic hg19 READ TCGA-AF-A56L 5 5'UTR-CDS Intra-chr q21.2 q12 Seq+ 12201 ChimerSeq FusionScan TCGA_RNA-Seq WIPF2-CACNB1 WIPF2 chr17 38375744 + CACNB1 chr17 37343854 - Exonic hg19 READ TCGA-AF-A56L 3 5'UTR-CDS Intra-chr q21.2 q12 Seq+ 12202 ChimerSeq FusionScan TCGA_RNA-Seq TOP2A-IKZF3 TOP2A chr17 38567360 - IKZF3 chr17 37922746 - Exonic hg19 READ TCGA-AF-A56L 3 Out-of-Frame Intra-chr q21.2 q21.1 Tumor suppressor gene Transcription factor Seq+ 12203 ChimerSeq FusionScan TCGA_RNA-Seq TOP2A-IKZF3 TOP2A chr17 38567605 - IKZF3 chr17 37922746 - Exonic hg19 READ TCGA-AF-A56L 2 Out-of-Frame Intra-chr q21.2 q21.1 Tumor suppressor gene Transcription factor Seq+ 12204 ChimerSeq FusionScan TCGA_RNA-Seq WIPF2-KRT19 WIPF2 chr17 38375744 + KRT19 chr17 39681525 - Exonic hg19 READ TCGA-AF-A56L 2 5'UTR-CDS Intra-chr q21.2 q21.2 Tumor suppressor gene 12205 ChimerSeq FusionScan TCGA_RNA-Seq GRAMD1C-PHLDB2 GRAMD1C chr3 113563496 + PHLDB2 chr3 111632165 + Exonic hg19 SARC TCGA-HS-A5N8 2 In-Frame Intra-chr q13.31 q13.2 12206 ChimerSeq FusionScan TCGA_RNA-Seq DCTN2-SRGAP1 DCTN2 chr12 57940810 - SRGAP1 chr12 64377726 + Exonic hg19 SARC TCGA-DX-A3LY 5 Out-of-Frame Intra-chr q13.3 q14.2 Seq+ 12207 ChimerSeq FusionScan TCGA_RNA-Seq DCTN2-SRGAP1 DCTN2 chr12 57939810 - SRGAP1 chr12 64377726 + Exonic hg19 SARC TCGA-DX-A3LY 5 Out-of-Frame Intra-chr q13.3 q14.2 Seq+ 12208 ChimerSeq FusionScan TCGA_RNA-Seq KLHDC10-PLGRKT KLHDC10 chr7 129710649 + PLGRKT chr9 5361888 - Exonic hg19 SARC TCGA-DX-A3LY 2 Out-of-Frame Inter-chr q32.2 p24.1 12209 ChimerSeq FusionScan TCGA_RNA-Seq ACACA-CCL5 ACACA chr17 35478276 - CCL5 chr17 34199468 - Exonic hg19 SARC TCGA-IE-A3OV 2 Out-of-Frame Intra-chr q12 Seq+ 12210 ChimerSeq FusionScan TCGA_RNA-Seq TP53-FOXK2 TP53 chr17 7590694 - FOXK2 chr17 80543779 + Exonic hg19 SARC TCGA-IE-A3OV 2 5'UTR-CDS Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor q25.3 Transcription factor Seq+ 12211 ChimerSeq FusionScan TCGA_RNA-Seq FOXK2-SPECC1 FOXK2 chr17 80529746 + SPECC1 chr17 19999943 + Exonic hg19 SARC TCGA-IE-A3OV 2 CDS-5'UTR Intra-chr q25.3 Transcription factor p11.2 Seq+ 12212 ChimerSeq FusionScan TCGA_RNA-Seq FKBP9-RNPEP FKBP9 chr7 33035961 + RNPEP chr1 201965274 + Exonic hg19 SARC TCGA-DX-A48O 2 In-Frame Inter-chr p14.3 q32.1 12213 ChimerSeq FusionScan TCGA_RNA-Seq ARFGEF1-SORCS2 ARFGEF1 chr8 68255398 - SORCS2 chr4 7398014 + Exonic hg19 SARC TCGA-DX-A48O 2 Out-of-Frame Inter-chr q13.2 p16.1 Seq+ 12214 ChimerSeq FusionScan TCGA_RNA-Seq YWHAZ-GNAI3 YWHAZ chr8 101964156 - GNAI3 chr1 110116358 + Exonic hg19 SARC TCGA-X6-A8C4 2 5'UTR-CDS Inter-chr q22.3 p13.3 12215 ChimerSeq FusionScan TCGA_RNA-Seq EP400-SFSWAP EP400 chr12 132472435 + SFSWAP chr12 132262609 + Exonic hg19 SARC TCGA-HB-A5W3 2 In-Frame Intra-chr q24.33 Oncogene q24.33 Seq+ 12216 ChimerSeq FusionScan TCGA_RNA-Seq PLA2G4C-ILF3 PLA2G4C chr19 48613743 - ILF3 chr19 10792668 + Exonic hg19 SARC TCGA-HB-A5W3 2 Out-of-Frame Intra-chr q13.33 p13.2 12217 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 SARC TCGA-N1-A6IA 2 Out-of-Frame Intra-chr q22.2 q22.2 12218 ChimerSeq FusionScan TCGA_RNA-Seq GPATCH8-METTL16 GPATCH8 chr17 42512432 - METTL16 chr17 2381179 - Exonic hg19 SARC TCGA-N1-A6IA 2 Out-of-Frame Intra-chr q21.31 p13.3 Seq+ 12219 ChimerSeq FusionScan TCGA_RNA-Seq AKAP8L-C19orf42 AKAP8L chr19 15521330 - C19orf42 chr19 16758072 - Exonic hg19 SARC TCGA-IE-A4EI 2 Out-of-Frame Intra-chr p13.12 Transcription factor 12220 ChimerSeq FusionScan TCGA_RNA-Seq SND1-IMMP2L SND1 chr7 127569382 + IMMP2L chr7 110303777 - Exonic hg19 SARC TCGA-FX-A3RE 4 Out-of-Frame Intra-chr q32.1 q31.1 Seq+ 12221 ChimerSeq FusionScan TCGA_RNA-Seq ANO7-SEPT2 ANO7 chr2 242157796 + SEPT2 chr2 242285580 + Exonic hg19 SARC TCGA-FX-A3RE 3 In-Frame Intra-chr q37.3 q37.3 Seq+ 12222 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 SARC TCGA-FX-A3RE 2 Out-of-Frame Intra-chr q22.2 q22.2 12223 ChimerSeq FusionScan TCGA_RNA-Seq LRP8-HYDIN LRP8 chr1 53792544 - HYDIN chr16 71127838 - Exonic hg19 SARC TCGA-DX-A23U 6 In-Frame Inter-chr p32.3 Seq+ 12224 ChimerSeq FusionScan TCGA_RNA-Seq HYDIN-SSBP3 HYDIN chr16 71094406 - SSBP3 chr1 54747200 - Exonic hg19 SARC TCGA-DX-A23U 4 In-Frame Inter-chr p32.3 Seq+ 12225 ChimerSeq FusionScan TCGA_RNA-Seq COPA-SLAMF1 COPA chr1 160275222 - SLAMF1 chr1 160604687 - Exonic hg19 SARC TCGA-DX-A23U 3 Out-of-Frame Intra-chr q23.2 q23.3 Seq+ 12226 ChimerSeq FusionScan TCGA_RNA-Seq PEA15-SNX27 PEA15 chr1 160175312 + SNX27 chr1 151630710 + Exonic hg19 SARC TCGA-DX-A23U 3 5'UTR-CDS Intra-chr q23.2 Tumor suppressor gene q21.3 Seq+ 12227 ChimerSeq FusionScan TCGA_RNA-Seq PRPF3-OTUD7B PRPF3 chr1 150318967 + OTUD7B chr1 149943179 - Exonic hg19 SARC TCGA-DX-A23U 2 In-Frame Intra-chr q21.2 q21.2 Seq+ 12228 ChimerSeq FusionScan TCGA_RNA-Seq DAB1-TMEM59 DAB1 chr1 57756635 - TMEM59 chr1 54507478 - Exonic hg19 SARC TCGA-DX-A23U 2 Out-of-Frame Intra-chr p32.1 p32.3 12229 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF17-C11orf67 ARHGEF17 chr11 73022875 + C11orf67 chr11 77553524 + Exonic hg19 SARC TCGA-X6-A7WC 2 CDS-5'UTR Intra-chr q13.4 Seq+ 12230 ChimerSeq FusionScan TCGA_RNA-Seq MYL9-EMP3 MYL9 chr20 35173471 + EMP3 chr19 48832608 + Exonic hg19 SARC TCGA-DX-A3U9 2 In-Frame Inter-chr q11.23 q13.33 12231 ChimerSeq FusionScan TCGA_RNA-Seq OR51B5-HBG1 OR51B5 chr11 5367002 - HBG1 chr11 5270820 - Exonic hg19 SARC TCGA-QQ-A5VC 2 5'UTR-CDS Intra-chr p15.4 p15.4 Seq+ 12232 ChimerSeq FusionScan TCGA_RNA-Seq USP38-RIT2 USP38 chr4 144109114 + RIT2 chr18 40323685 - Exonic hg19 SARC TCGA-DX-A6YR 4 Out-of-Frame Inter-chr q31.21 q12.3 Seq+ 12233 ChimerSeq FusionScan TCGA_RNA-Seq UBQLN1-NLRP5 UBQLN1 chr9 86292641 - NLRP5 chr19 56530707 + Exonic hg19 SARC TCGA-DX-A6YR 2 In-Frame Inter-chr q21.32 q13.43 Seq+ 12234 ChimerSeq FusionScan TCGA_RNA-Seq UBQLN1-NLRP5 UBQLN1 chr9 86292641 - NLRP5 chr19 56531740 + Exonic hg19 SARC TCGA-DX-A6YR 2 In-Frame Inter-chr q21.32 q13.43 Seq+ 12235 ChimerSeq FusionScan TCGA_RNA-Seq GBF1-CTDSP2 GBF1 chr10 104005538 + CTDSP2 chr12 58218102 - Exonic hg19 SARC TCGA-DX-A23T 2 5'UTR-CDS Inter-chr q24.32 q14.1 Seq+ 12236 ChimerSeq FusionScan TCGA_RNA-Seq MYH10-TEKT3 MYH10 chr17 8492398 - TEKT3 chr17 15217547 - Exonic hg19 SARC TCGA-HB-A2OT 3 In-Frame Intra-chr p13.1 p12 Seq+ 12237 ChimerSeq FusionScan TCGA_RNA-Seq MYH10-OLFM4 MYH10 chr17 8533971 - OLFM4 chr13 53608482 + Exonic hg19 SARC TCGA-X6-A8C5 3 5'UTR-CDS Inter-chr p13.1 q14.3 Tumor suppressor gene Seq+ 12238 ChimerSeq FusionScan TCGA_RNA-Seq CHSY3-RBM22 CHSY3 chr5 129244053 + RBM22 chr5 150078193 - Exonic hg19 SARC TCGA-KD-A5QS 3 In-Frame Intra-chr q23.3 q33.1 Seq+ 12239 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1614-F11R KIAA1614 chr1 180897709 + F11R chr1 160970138 - Exonic hg19 SARC TCGA-DX-A1L0 2 Out-of-Frame Intra-chr q25.3 q23.3 Seq+ 12240 ChimerSeq FusionScan TCGA_RNA-Seq SLFN5-TBC1D15 SLFN5 chr17 33570162 + TBC1D15 chr12 72307605 + Exonic hg19 SARC TCGA-DX-A1L0 2 5'UTR-5'UTR Inter-chr q12 q21.1 Seq+ 12241 ChimerSeq FusionScan TCGA_RNA-Seq HMGA2-ARFGAP2 HMGA2 chr12 66219161 + ARFGAP2 chr11 47193884 - Exonic hg19 SARC TCGA-DX-A1L0 2 Out-of-Frame Inter-chr q14.3 Transcription factor p11.2 Seq+ 12242 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D15-SLC16A7 TBC1D15 chr12 72266783 + SLC16A7 chr12 60164999 + Exonic hg19 SARC TCGA-DX-A1L0 2 Out-of-Frame Intra-chr q21.1 q14.1 Seq+ 12243 ChimerSeq FusionScan TCGA_RNA-Seq ZFC3H1-MON2 ZFC3H1 chr12 72050664 - MON2 chr12 62972224 + Exonic hg19 SARC TCGA-DX-A1L0 2 Out-of-Frame Intra-chr q21.1 q14.1 Seq+ 12244 ChimerSeq FusionScan TCGA_RNA-Seq ZNF519-EIF4G2 ZNF519 chr18 14132273 - EIF4G2 chr11 10820660 - Exonic hg19 SARC TCGA-DX-A48U 2 Out-of-Frame Inter-chr p11.21 Transcription factor p15.4 12245 ChimerSeq FusionScan TCGA_RNA-Seq IFI6-PLA2G4C IFI6 chr1 27998633 - PLA2G4C chr19 48578131 - Exonic hg19 SARC TCGA-MB-A5YA 2 5'UTR-CDS Inter-chr p35.3 q13.33 12246 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-MAGED4B RCC1 chr1 28834672 + MAGED4B chrX 51934089 + Exonic hg19 SARC TCGA-JV-A5VF 2 5'UTR-5'UTR Inter-chr p35.3 p11.22 12247 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-MAGED4B RCC1 chr1 28834672 + MAGED4B chrX 51806197 - Exonic hg19 SARC TCGA-JV-A5VF 2 5'UTR-5'UTR Inter-chr p35.3 p11.22 12248 ChimerSeq FusionScan TCGA_RNA-Seq CTDSP2-LSM14A CTDSP2 chr12 58240154 - LSM14A chr19 34699833 + Exonic hg19 SARC TCGA-DX-A7EI 9 In-Frame Inter-chr q14.1 Seq+ 12249 ChimerSeq FusionScan TCGA_RNA-Seq EEA1-HOTAIR EEA1 chr12 93322818 - HOTAIR chr12 54362540 - Exonic hg19 SARC TCGA-DX-A7EI 7 CDS-5'UTR Intra-chr q22 Transcription factor q13.13 Seq+ 12250 ChimerSeq FusionScan TCGA_RNA-Seq MRPL42-FGD6 MRPL42 chr12 93881436 + FGD6 chr12 95475332 - Exonic hg19 SARC TCGA-DX-A7EI 7 In-Frame Intra-chr q22 q22 Seq+ 12251 ChimerSeq FusionScan TCGA_RNA-Seq GRAMD1A-RAB3IP GRAMD1A chr19 35491390 + RAB3IP chr12 70193988 + Exonic hg19 SARC TCGA-DX-A7EI 6 Out-of-Frame Inter-chr q13.11 q15 Seq+ 12252 ChimerSeq FusionScan TCGA_RNA-Seq LSM14A-TMTC2 LSM14A chr19 34699956 + TMTC2 chr12 83525988 + Exonic hg19 SARC TCGA-DX-A7EI 5 Out-of-Frame Inter-chr q21.31 Seq+ 12253 ChimerSeq FusionScan TCGA_RNA-Seq PRICKLE1-LRIG3 PRICKLE1 chr12 42983266 - LRIG3 chr12 59284578 - Exonic hg19 SARC TCGA-DX-A7EI 5 5'UTR-CDS Intra-chr q12 Tumor suppressor gene q14.1 Tumor suppressor gene Seq+ 12254 ChimerSeq FusionScan TCGA_RNA-Seq SLC38A2-RAB3IP SLC38A2 chr12 46766291 - RAB3IP chr12 70178499 + Exonic hg19 SARC TCGA-DX-A7EI 4 5'UTR-5'UTR Intra-chr q13.11 q15 Seq+ 12255 ChimerSeq FusionScan TCGA_RNA-Seq ACSS3-STAU2 ACSS3 chr12 81537026 + STAU2 chr8 74334937 - Exonic hg19 SARC TCGA-DX-A7EI 4 In-Frame Inter-chr q21.31 q21.11 Seq+ 12256 ChimerSeq FusionScan TCGA_RNA-Seq ACSS3-CYP39A1 ACSS3 chr12 81472210 + CYP39A1 chr6 46518174 - Exonic hg19 SARC TCGA-DX-A7EI 4 Out-of-Frame Inter-chr q21.31 p12.3 Seq+ 12257 ChimerSeq FusionScan TCGA_RNA-Seq MARC1-VPS33A MARC1 chr1 220971356 + VPS33A chr12 122748746 - Exonic hg19 SARC TCGA-DX-A7EI 3 In-Frame Inter-chr q41 q24.31 Seq+ 12258 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-PARP1 FRS2 chr12 69864310 + PARP1 chr1 226558218 - Exonic hg19 SARC TCGA-DX-A7EI 3 5'UTR-CDS Inter-chr q15 q42.12 Oncogene Tumor suppressor gene Seq+ 12259 ChimerSeq FusionScan TCGA_RNA-Seq PRICKLE1-ZCRB1 PRICKLE1 chr12 42877177 - ZCRB1 chr12 42707788 - Exonic hg19 SARC TCGA-DX-A7EI 2 5'UTR-CDS Intra-chr q12 Tumor suppressor gene q12 Seq+ 12260 ChimerSeq FusionScan TCGA_RNA-Seq FBXL7-CDH10 FBXL7 chr5 15616181 + CDH10 chr5 24593722 - Exonic hg19 SARC TCGA-DX-A7EI 2 CDS-5'UTR Intra-chr p15.1 p14.1 Seq+ 12261 ChimerSeq FusionScan TCGA_RNA-Seq SLC38A2-RAB3IP SLC38A2 chr12 46766291 - RAB3IP chr12 70188216 + Exonic hg19 SARC TCGA-DX-A7EI 2 5'UTR-5'UTR Intra-chr q13.11 q15 Seq+ 12262 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-ACSS3 FRS2 chr12 69864310 + ACSS3 chr12 81528594 + Exonic hg19 SARC TCGA-DX-A7EI 2 5'UTR-CDS Intra-chr q15 q21.31 Seq+ 12263 ChimerSeq FusionScan TCGA_RNA-Seq IRX2-C5orf38 IRX2 chr5 2748458 - C5orf38 chr5 2755142 + Exonic hg19 SARC TCGA-DX-A7EI 2 Out-of-Frame Intra-chr p15.33 Transcription factor p15.33 Seq+ 12264 ChimerSeq FusionScan TCGA_RNA-Seq KIF5A-NAV3 KIF5A chr12 57976998 + NAV3 chr12 78594252 + Exonic hg19 SARC TCGA-DX-A7EI 2 3'UTR-CDS Intra-chr q13.3 q21.2 Seq+ 12265 ChimerSeq FusionScan TCGA_RNA-Seq MSRB3-HMGA2 MSRB3 chr12 65762806 + HMGA2 chr12 66345162 + Exonic hg19 SARC TCGA-DX-A7EI 2 Out-of-Frame Intra-chr q14.3 q14.3 Transcription factor Seq+ 12266 ChimerSeq FusionScan TCGA_RNA-Seq PRICKLE1-ZCRB1 PRICKLE1 chr12 42877559 - ZCRB1 chr12 42707788 - Exonic hg19 SARC TCGA-DX-A7EI 2 5'UTR-CDS Intra-chr q12 Tumor suppressor gene q12 Seq+ 12267 ChimerSeq FusionScan TCGA_RNA-Seq C12orf26-ATP2B1 C12orf26 chr12 82793173 + ATP2B1 chr12 90005149 - Exonic hg19 SARC TCGA-DX-A48N 5 In-Frame Intra-chr q21.33 Seq+ 12268 ChimerSeq FusionScan TCGA_RNA-Seq TMTC2-GNA14 TMTC2 chr12 83290425 + GNA14 chr9 80144169 - Exonic hg19 SARC TCGA-DX-A48N 5 In-Frame Inter-chr q21.31 q21.2 Seq+ 12269 ChimerSeq FusionScan TCGA_RNA-Seq LIN54-SEC31A LIN54 chr4 83891479 - SEC31A chr4 83750211 - Exonic hg19 SARC TCGA-DX-A48N 3 Out-of-Frame Intra-chr q21.22 Transcription factor q21.22 Seq+ 12270 ChimerSeq FusionScan TCGA_RNA-Seq SLC41A2-DNM3 SLC41A2 chr12 105280070 - DNM3 chr1 172100314 + Exonic hg19 SARC TCGA-DX-A48N 3 Out-of-Frame Inter-chr q23.3 q24.3 Seq+ 12271 ChimerSeq FusionScan TCGA_RNA-Seq OSTF1-SMARCA4 OSTF1 chr9 77703642 + SMARCA4 chr19 11141405 + Exonic hg19 SARC TCGA-DX-A48N 2 In-Frame Inter-chr q21.13 p13.2 Oncogene Tumor suppressor gene Seq+ 12272 ChimerSeq FusionScan TCGA_RNA-Seq PTAR1-PIP5K1B PTAR1 chr9 72347054 - PIP5K1B chr9 71503896 + Exonic hg19 SARC TCGA-DX-A48N 2 In-Frame Intra-chr q21.12 q21.11 Seq+ 12273 ChimerSeq FusionScan TCGA_RNA-Seq UTRN-OSTF1 UTRN chr6 145051622 + OSTF1 chr9 77732419 + Exonic hg19 SARC TCGA-DX-A48N 2 In-Frame Inter-chr q24.2 q21.13 Seq+ 12274 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-CHMP1A CPSF6 chr12 69656342 + CHMP1A chr16 89713739 - Exonic hg19 SARC TCGA-DX-A48N 2 3'UTR-3'UTR Inter-chr q15 q24.3 Seq+ 12275 ChimerSeq FusionScan TCGA_RNA-Seq ZNF407-CYB5A ZNF407 chr18 72353078 + CYB5A chr18 71923010 - Exonic hg19 SARC TCGA-DX-A48N 2 Out-of-Frame Intra-chr q22.3 Transcription factor q22.3 Tumor suppressor gene Seq+ 12276 ChimerSeq FusionScan TCGA_RNA-Seq TRIO-TERT TRIO chr5 14420130 + TERT chr5 1282739 - Exonic hg19 SARC TCGA-DX-A7EF 5 In-Frame Intra-chr p15.2 p15.33 Oncogene Seq+ 12277 ChimerSeq FusionScan TCGA_RNA-Seq SULF1-TERF1 SULF1 chr8 70533486 + TERF1 chr8 73958195 + Exonic hg19 SARC TCGA-DX-A7ET 2 Out-of-Frame Intra-chr q13.2 q21.11 Transcription factor Seq+ 12278 ChimerSeq FusionScan TCGA_RNA-Seq TSPAN31-WIF1 TSPAN31 chr12 58140914 + WIF1 chr12 65471634 - Exonic hg19 SARC TCGA-DX-A23V 4 In-Frame Intra-chr q14.1 q14.3 Tumor suppressor gene Seq+ 12279 ChimerSeq FusionScan TCGA_RNA-Seq YEATS4-PARPBP YEATS4 chr12 69756687 + PARPBP chr12 102589728 + Exonic hg19 SARC TCGA-DX-A23V 3 Out-of-Frame Intra-chr q15 q23.2 Seq+ 12280 ChimerSeq FusionScan TCGA_RNA-Seq TCTN1-FGGY TCTN1 chr12 111052207 + FGGY chr1 59787207 + Exonic hg19 SARC TCGA-DX-A23V 2 5'UTR-5'UTR Inter-chr q24.11 p32.1 Seq+ 12281 ChimerSeq FusionScan TCGA_RNA-Seq FGD6-TBC1D30 FGD6 chr12 95528514 - TBC1D30 chr12 65232462 + Exonic hg19 SARC TCGA-DX-A23V 2 In-Frame Intra-chr q22 q14.3 Seq+ 12282 ChimerSeq FusionScan TCGA_RNA-Seq OMA1-CDK4 OMA1 chr1 58971731 - CDK4 chr12 58142400 - Exonic hg19 SARC TCGA-DX-A23V 2 In-Frame Inter-chr p32.1 q14.1 CMGC:CDK Oncogene Seq+ 12283 ChimerSeq FusionScan TCGA_RNA-Seq CTDSP2-ZDHHC17 CTDSP2 chr12 58223230 - ZDHHC17 chr12 77242012 + Exonic hg19 SARC TCGA-FX-A3NK 3 Out-of-Frame Intra-chr q14.1 q21.2 Seq+ 12284 ChimerSeq FusionScan TCGA_RNA-Seq PTPRS-ANGPTL4 PTPRS chr19 5286060 - ANGPTL4 chr19 8430837 + Exonic hg19 SARC TCGA-FX-A3NK 2 Out-of-Frame Intra-chr p13.3 p13.2 Tumor suppressor gene Seq+ 12285 ChimerSeq FusionScan TCGA_RNA-Seq STK32B-SOBP STK32B chr4 5170177 + SOBP chr6 107824860 + Exonic hg19 SARC TCGA-FX-A3NK 2 Out-of-Frame Inter-chr p16.2 q21 12286 ChimerSeq FusionScan TCGA_RNA-Seq ATP8B4-LINGO1 ATP8B4 chr15 50330964 - LINGO1 chr15 77908242 - Exonic hg19 SARC TCGA-FX-A3NK 2 Out-of-Frame Intra-chr q21.2 q24.3 Seq+ 12287 ChimerSeq FusionScan TCGA_RNA-Seq WASF1-SLC41A3 WASF1 chr6 110434528 - SLC41A3 chr3 125731592 - Exonic hg19 SARC TCGA-FX-A3NK 2 In-Frame Inter-chr q21 q21.3 Seq+ 12288 ChimerSeq FusionScan TCGA_RNA-Seq PDE4A-MBD3L2 PDE4A chr19 10541762 + MBD3L2 chr19 7051051 + Exonic hg19 SARC TCGA-FX-A3NK 2 Out-of-Frame Intra-chr p13.2 p13.2 Seq+ 12289 ChimerSeq FusionScan TCGA_RNA-Seq DOT1L-PSG3 DOT1L chr19 2164264 + PSG3 chr19 43237214 - Exonic hg19 SARC TCGA-DX-A6B9 2 Out-of-Frame Intra-chr p13.3 Oncogene Transcription factor q13.2 12290 ChimerSeq FusionScan TCGA_RNA-Seq ITM2B-RB1 ITM2B chr13 48807613 + RB1 chr13 49051490 + Exonic hg19 SARC TCGA-DX-A6YU 7 Out-of-Frame Intra-chr q14.2 q14.2 Oncogene Tumor suppressor gene Seq+ 12291 ChimerSeq FusionScan TCGA_RNA-Seq SP3-CYBRD1 SP3 chr2 174828488 - CYBRD1 chr2 172409855 + Exonic hg19 SARC TCGA-DX-A1KY 5 In-Frame Intra-chr q31.1 Transcription factor q31.1 Seq+ 12292 ChimerSeq FusionScan TCGA_RNA-Seq WDFY1-PARD3B WDFY1 chr2 224809864 - PARD3B chr2 206364619 + Exonic hg19 SARC TCGA-DX-A1KY 4 In-Frame Intra-chr q36.1 q33.3 Seq+ 12293 ChimerSeq FusionScan TCGA_RNA-Seq RAB5A-PLCL2 RAB5A chr3 19992553 + PLCL2 chr3 17051165 + Exonic hg19 SARC TCGA-DX-A1KY 4 Out-of-Frame Intra-chr p24.3 Seq+ 12294 ChimerSeq FusionScan TCGA_RNA-Seq C1orf9-CXorf21 C1orf9 chr1 172526934 + CXorf21 chrX 30594983 - Exonic hg19 SARC TCGA-DX-A1KY 3 CDS-5'UTR Inter-chr p21.2 Seq+ 12295 ChimerSeq FusionScan TCGA_RNA-Seq RBBP7-TTC24 RBBP7 chrX 16888160 - TTC24 chr1 156552022 + Exonic hg19 SARC TCGA-DX-A1KY 3 In-Frame Inter-chr p22.2 Tumor suppressor gene q22 Seq+ 12296 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP24-STAC ARHGAP24 chr4 86396712 + STAC chr3 36570187 + Exonic hg19 SARC TCGA-DX-A1KY 3 5'UTR-CDS Inter-chr q21.23 p22.3 Seq+ 12297 ChimerSeq FusionScan TCGA_RNA-Seq ZDBF2-PSMD1 ZDBF2 chr2 207146633 + PSMD1 chr2 232003449 + Exonic hg19 SARC TCGA-DX-A1KY 3 Out-of-Frame Intra-chr q37.1 Seq+ 12298 ChimerSeq FusionScan TCGA_RNA-Seq DMD-LIX1L DMD chrX 31279071 - LIX1L chr1 145487303 + Exonic hg19 SARC TCGA-DX-A1KY 2 In-Frame Inter-chr p21.1 Tumor suppressor gene q21.1 Seq+ 12299 ChimerSeq FusionScan TCGA_RNA-Seq APOO-ACOT9 APOO chrX 23925810 - ACOT9 chrX 23754133 - Exonic hg19 SARC TCGA-DX-A1KY 2 Out-of-Frame Intra-chr p22.11 p22.11 Seq+ 12300 ChimerSeq FusionScan TCGA_RNA-Seq IL11RA-WDR72 IL11RA chr9 34652230 + WDR72 chr15 53889471 - Exonic hg19 SARC TCGA-DX-A1KY 2 5'UTR-CDS Inter-chr p13.3 q21.3 Seq+ 12301 ChimerSeq FusionScan TCGA_RNA-Seq NUF2-PHEX NUF2 chr1 163310216 + PHEX chrX 22151639 + Exonic hg19 SARC TCGA-DX-A1KY 2 In-Frame Inter-chr q23.3 p22.11 Seq+ 12302 ChimerSeq FusionScan TCGA_RNA-Seq MEF2A-SV2B MEF2A chr15 100230633 + SV2B chr15 91795048 + Exonic hg19 SARC TCGA-DX-A1KY 2 Out-of-Frame Intra-chr q26.3 Transcription factor q26.1 Seq+ 12303 ChimerSeq FusionScan TCGA_RNA-Seq FAM220A-SCGB1A1 FAM220A chr7 6388203 - SCGB1A1 chr11 62189692 + Exonic hg19 SARC TCGA-DX-A1KY 2 5'UTR-CDS Inter-chr p22.1 q12.3 Seq+ 12304 ChimerSeq FusionScan TCGA_RNA-Seq PPFIA1-BBOX1 PPFIA1 chr11 70202360 + BBOX1 chr11 27136998 + Exonic hg19 SARC TCGA-VT-A80J 4 In-Frame Intra-chr q13.3 p14.2 Seq+ 12305 ChimerSeq FusionScan TCGA_RNA-Seq EP400-SFSWAP EP400 chr12 132434581 + SFSWAP chr12 132271007 + Exonic hg19 SARC TCGA-VT-A80J 3 5'UTR-CDS Intra-chr q24.33 Oncogene q24.33 Seq+ 12306 ChimerSeq FusionScan TCGA_RNA-Seq EP400-SFSWAP EP400 chr12 132446499 + SFSWAP chr12 132262609 + Exonic hg19 SARC TCGA-VT-A80J 2 In-Frame Intra-chr q24.33 Oncogene q24.33 Seq+ 12307 ChimerSeq FusionScan TCGA_RNA-Seq SMAD3-C15orf44 SMAD3 chr15 67358698 + C15orf44 chr15 65877226 - Exonic hg19 SARC TCGA-VT-A80J 2 Out-of-Frame Intra-chr q22.33 Transcription factor Seq+ 12308 ChimerSeq FusionScan TCGA_RNA-Seq SS18-SSX1 SS18 chr18 23612362 - SSX1 chrX 48123216 + Exonic hg19 SARC TCGA-X6-A8C7 2 In-Frame Inter-chr q11.2 p11.23 Oncogene KB Pub Seq+ 12309 ChimerSeq FusionScan TCGA_RNA-Seq NHSL1-KIAA1244 NHSL1 chr6 138817355 - KIAA1244 chr6 138491798 + Exonic hg19 SARC TCGA-IF-A3RQ 5 In-Frame Intra-chr q24.1 Seq+ 12310 ChimerSeq FusionScan TCGA_RNA-Seq CTDSP2-HMGA2 CTDSP2 chr12 58240154 - HMGA2 chr12 66345162 + Exonic hg19 SARC TCGA-IF-A3RQ 5 Out-of-Frame Intra-chr q14.1 q14.3 Transcription factor Seq+ 12311 ChimerSeq FusionScan TCGA_RNA-Seq COL16A1-DNAJC11 COL16A1 chr1 32137215 - DNAJC11 chr1 6711662 - Exonic hg19 SARC TCGA-IF-A3RQ 2 In-Frame Intra-chr p35.2 p36.31 Tumor suppressor gene 12312 ChimerSeq FusionScan TCGA_RNA-Seq MYH10-CDKN2A MYH10 chr17 8526219 - CDKN2A chr9 21971207 - Exonic hg19 SARC TCGA-SI-A71P 3 In-Frame Inter-chr p13.1 p21.3 Oncogene Tumor suppressor gene Seq+ 12313 ChimerSeq FusionScan TCGA_RNA-Seq LATS2-MYLK LATS2 chr13 21635484 - MYLK chr3 123386034 - Exonic hg19 SARC TCGA-K1-A42X 3 5'UTR-CDS Inter-chr q12.11 AGC:NDR Tumor suppressor gene q21.1 Seq+ 12314 ChimerSeq FusionScan TCGA_RNA-Seq TOPBP1-SPDEF TOPBP1 chr3 133341934 - SPDEF chr6 34512261 - Exonic hg19 SARC TCGA-K1-A42X 2 CDS-5'UTR Inter-chr q22.1 p21.31 Transcription factor Seq+ 12315 ChimerSeq FusionScan TCGA_RNA-Seq ATRN-UQCRB ATRN chr20 3541552 + UQCRB chr8 97245455 - Exonic hg19 SARC TCGA-K1-A42X 2 In-Frame Inter-chr p13 q22.1 Seq+ 12316 ChimerSeq FusionScan TCGA_RNA-Seq SCMH1-CASP9 SCMH1 chr1 41707730 - CASP9 chr1 15844890 - Exonic hg19 SARC TCGA-K1-A3PO 2 5'UTR-5'UTR Intra-chr p34.2 Transcription factor p36.21 Seq+ 12317 ChimerSeq FusionScan TCGA_RNA-Seq MDM2-TSPAN31 MDM2 chr12 69203072 + TSPAN31 chr12 58140371 + Exonic hg19 SARC TCGA-DX-A2J4 7 In-Frame Intra-chr q15 Oncogene q14.1 Seq+ 12318 ChimerSeq FusionScan TCGA_RNA-Seq C15orf24-CD27 C15orf24 chr15 34388095 - CD27 chr12 6554589 + Exonic hg19 SARC TCGA-X6-A8C6 2 CDS-3'UTR Inter-chr p13.31 Seq+ 12319 ChimerSeq FusionScan TCGA_RNA-Seq TP53-DNAH2 TP53 chr17 7590694 - DNAH2 chr17 7733617 + Exonic hg19 SARC TCGA-X6-A8C6 2 5'UTR-CDS Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.1 Seq+ 12320 ChimerSeq FusionScan TCGA_RNA-Seq FBXO25-THAP4 FBXO25 chr8 363213 + THAP4 chr2 242545888 - Exonic hg19 SARC TCGA-K1-A6RV 5 Out-of-Frame Inter-chr p23.3 Tumor suppressor gene q37.3 Transcription factor 12321 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB20-MTL5 ZBTB20 chr3 114219198 - MTL5 chr11 68475968 - Exonic hg19 SARC TCGA-K1-A6RV 3 5'UTR-CDS Inter-chr q13.31 Transcription factor Seq+ 12322 ChimerSeq FusionScan TCGA_RNA-Seq AGPAT9-COPS4 AGPAT9 chr4 84465755 + COPS4 chr4 83987590 + Exonic hg19 SARC TCGA-K1-A6RV 2 In-Frame Intra-chr q21.22 Seq+ 12323 ChimerSeq FusionScan TCGA_RNA-Seq GLOD4-NPLOC4 GLOD4 chr17 673108 - NPLOC4 chr17 79589304 - Exonic hg19 SARC TCGA-JV-A5VE 2 In-Frame Intra-chr p13.3 q25.3 Seq+ 12324 ChimerSeq FusionScan TCGA_RNA-Seq RBPMS2-FAM96A RBPMS2 chr15 65040617 - FAM96A chr15 64367736 - Exonic hg19 SARC TCGA-IE-A6BZ 3 In-Frame Intra-chr q22.31 q22.31 Seq+ 12325 ChimerSeq FusionScan TCGA_RNA-Seq COX14-FBN1 COX14 chr12 50506084 + FBN1 chr15 48762953 - Exonic hg19 SARC TCGA-IE-A6BZ 3 5'UTR-CDS Inter-chr q13.12 q21.1 Seq+ 12326 ChimerSeq FusionScan TCGA_RNA-Seq VEGFA-NRD1 VEGFA chr6 43739049 + NRD1 chr1 52306186 - Exonic hg19 SARC TCGA-IE-A6BZ 2 Out-of-Frame Inter-chr p21.1 Tumor suppressor gene Seq+ 12327 ChimerSeq FusionScan TCGA_RNA-Seq NAV1-TIMM17A NAV1 chr1 201687883 + TIMM17A chr1 201926408 + Exonic hg19 SARC TCGA-IE-A6BZ 2 In-Frame Intra-chr q32.1 q32.1 Seq+ 12328 ChimerSeq FusionScan TCGA_RNA-Seq ZNF451-PRIM2 ZNF451 chr6 56989657 + PRIM2 chr6 57183234 + Exonic hg19 SARC TCGA-IE-A6BZ 2 CDS-5'UTR Intra-chr p12.1 Transcription factor p11.2 Seq+ 12329 ChimerSeq FusionScan TCGA_RNA-Seq TAF2-CLVS1 TAF2 chr8 120843916 - CLVS1 chr8 62412013 + Exonic hg19 SARC TCGA-IE-A6BZ 2 Out-of-Frame Intra-chr q24.12 q12.2 Seq+ 12330 ChimerSeq FusionScan TCGA_RNA-Seq NAV1-TIMM17B NAV1 chr1 201687883 + TIMM17B chrX 48754141 - Exonic hg19 SARC TCGA-IE-A6BZ 2 In-Frame Inter-chr q32.1 p11.23 12331 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC17-SERINC2 ZCCHC17 chr1 31821821 + SERINC2 chr1 31883231 + Exonic hg19 SARC TCGA-IE-A6BZ 2 In-Frame Intra-chr p35.2 p35.2 12332 ChimerSeq FusionScan TCGA_RNA-Seq IGFBP7-C4orf34 IGFBP7 chr4 57976042 - C4orf34 chr4 39606800 - Exonic hg19 SARC TCGA-IE-A6BZ 2 CDS-5'UTR Intra-chr q12 Tumor suppressor gene 12333 ChimerSeq FusionScan TCGA_RNA-Seq RAP1B-DPT RAP1B chr12 69004832 + DPT chr1 168683584 - Exonic hg19 SARC TCGA-DX-A1KU 7 5'UTR-CDS Inter-chr q15 q24.2 Seq+ 12334 ChimerSeq FusionScan TCGA_RNA-Seq EIF3M-UEVLD EIF3M chr11 32617593 + UEVLD chr11 18591924 - Exonic hg19 SARC TCGA-DX-A1KU 6 In-Frame Intra-chr p13 p15.1 Seq+ 12335 ChimerSeq FusionScan TCGA_RNA-Seq RAP1B-DPT RAP1B chr12 69004823 + DPT chr1 168683584 - Exonic hg19 SARC TCGA-DX-A1KU 4 5'UTR-CDS Inter-chr q15 q24.2 Seq+ 12336 ChimerSeq FusionScan TCGA_RNA-Seq DENND1B-TSPAN31 DENND1B chr1 197741997 - TSPAN31 chr12 58140371 + Exonic hg19 SARC TCGA-DX-A1KU 3 Out-of-Frame Inter-chr q31.3 q14.1 Seq+ 12337 ChimerSeq FusionScan TCGA_RNA-Seq UEVLD-PRMT3 UEVLD chr11 18610159 - PRMT3 chr11 20473675 + Exonic hg19 SARC TCGA-DX-A1KU 3 In-Frame Intra-chr p15.1 p15.1 Transcription factor Seq+ 12338 ChimerSeq FusionScan TCGA_RNA-Seq YEATS4-NME7 YEATS4 chr12 69759664 + NME7 chr1 169102055 - Exonic hg19 SARC TCGA-DX-A1KU 3 In-Frame Inter-chr q15 q24.2 Seq+ 12339 ChimerSeq FusionScan TCGA_RNA-Seq MARCH6-GALNTL4 2019_ 3_ 6_ chr5 10411649 + GALNTL4 chr11 11400811 - Exonic hg19 SARC TCGA-DX-A1KU 2 Out-of-Frame Inter-chr p15.2 Seq+ 12340 ChimerSeq FusionScan TCGA_RNA-Seq PDE4DIP-COPA PDE4DIP chr1 145039589 - COPA chr1 160283915 - Exonic hg19 SARC TCGA-DX-A1KU 2 Out-of-Frame Intra-chr q21.2 Oncogene q23.2 12341 ChimerSeq FusionScan TCGA_RNA-Seq PRRG4-ZNF215 PRRG4 chr11 32861785 + ZNF215 chr11 6953324 + Exonic hg19 SARC TCGA-DX-A1KU 2 CDS-5'UTR Intra-chr p13 p15.4 Transcription factor Seq+ 12342 ChimerSeq FusionScan TCGA_RNA-Seq YEATS4-NME7 YEATS4 chr12 69756687 + NME7 chr1 169102055 - Exonic hg19 SARC TCGA-DX-A1KU 2 In-Frame Inter-chr q15 q24.2 Seq+ 12343 ChimerSeq FusionScan TCGA_RNA-Seq LRIG3-SLC16A7 LRIG3 chr12 59267836 - SLC16A7 chr12 60164999 + Exonic hg19 SARC TCGA-DX-A1KU 2 In-Frame Intra-chr q14.1 Tumor suppressor gene q14.1 Seq+ 12344 ChimerSeq FusionScan TCGA_RNA-Seq UCHL5-C1orf112 UCHL5 chr1 192990226 - C1orf112 chr1 169818640 + Exonic hg19 SARC TCGA-DX-A1KU 2 In-Frame Intra-chr q31.2 q24.2 Seq+ 12345 ChimerSeq FusionScan TCGA_RNA-Seq MAFF-OSBP2 MAFF chr22 38598219 + OSBP2 chr22 31266415 + Exonic hg19 SARC TCGA-QQ-A5VA 3 5'UTR-CDS Intra-chr q13.1 Transcription factor q12.2 Seq+ 12346 ChimerSeq FusionScan TCGA_RNA-Seq ANLN-DGKB ANLN chr7 36436028 + DGKB chr7 14517850 - Exonic hg19 SARC TCGA-QQ-A5VA 2 Out-of-Frame Intra-chr p14.2 p21.2 Seq+ 12347 ChimerSeq FusionScan TCGA_RNA-Seq GNG7-PAQR5 GNG7 chr19 2520605 - PAQR5 chr15 69692312 + Exonic hg19 SARC TCGA-DX-A3UF 2 In-Frame Inter-chr p13.3 q23 Seq+ 12348 ChimerSeq FusionScan TCGA_RNA-Seq CA6-RER1 CA6 chr1 9009501 + RER1 chr1 2334473 + Exonic hg19 SARC TCGA-DX-A7EU 2 Out-of-Frame Intra-chr p36.23 p36.32 Seq+ 12349 ChimerSeq FusionScan TCGA_RNA-Seq TMEM9B-PSIP1 TMEM9B chr11 8983638 - PSIP1 chr9 15490122 - Exonic hg19 SARC TCGA-VT-A80G 2 In-Frame Inter-chr p15.4 p22.3 Oncogene Seq+ 12350 ChimerSeq FusionScan TCGA_RNA-Seq SS18-SSX2 SS18 chr18 23612362 - SSX2 chrX 52789420 + Exonic hg19 SARC TCGA-FX-A8OO 2 In-Frame Inter-chr q11.2 p11.22 KB Pub Seq+ 12351 ChimerSeq FusionScan TCGA_RNA-Seq SS18-SSX1 SS18 chr18 23612362 - SSX1 chrX 48123216 + Exonic hg19 SARC TCGA-FX-A8OO 2 In-Frame Inter-chr q11.2 p11.23 Oncogene KB Pub Seq+ 12352 ChimerSeq FusionScan TCGA_RNA-Seq SS18-SSX8 SS18 chr18 23612362 - SSX8 chrX 52659320 + Exonic hg19 SARC TCGA-FX-A8OO 2 CDS-5'UTR Inter-chr q11.2 p11.22 12353 ChimerSeq FusionScan TCGA_RNA-Seq YKT6-EIF3B YKT6 chr7 44240838 + EIF3B chr7 2419028 + Exonic hg19 SARC TCGA-SG-A849 4 Out-of-Frame Intra-chr p13 p22.3 Seq+ 12354 ChimerSeq FusionScan TCGA_RNA-Seq PLAUR-WDR45 PLAUR chr19 44169467 - WDR45 chrX 48935771 - Exonic hg19 SARC TCGA-FX-A3TO 5 CDS-5'UTR Inter-chr q13.31 p11.23 Seq+ 12355 ChimerSeq FusionScan TCGA_RNA-Seq CHD2-CCPG1 CHD2 chr15 93444529 + CCPG1 chr15 55677912 - Exonic hg19 SARC TCGA-FX-A3TO 4 Out-of-Frame Intra-chr q26.1 q21.3 Seq+ 12356 ChimerSeq FusionScan TCGA_RNA-Seq SPAG5-SDF2 SPAG5 chr17 26918715 - SDF2 chr17 26976294 - Exonic hg19 SARC TCGA-FX-A3TO 4 In-Frame Intra-chr q11.2 q11.2 Seq+ 12357 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC17-TRIP4 DNAJC17 chr15 41099566 - TRIP4 chr15 64747195 + Exonic hg19 SARC TCGA-FX-A3TO 3 Out-of-Frame Intra-chr q15.1 q22.31 Seq+ 12358 ChimerSeq FusionScan TCGA_RNA-Seq PLXDC1-ACE PLXDC1 chr17 37307614 - ACE chr17 61566008 + Exonic hg19 SARC TCGA-FX-A3TO 3 In-Frame Intra-chr q12 q23.3 Seq+ 12359 ChimerSeq FusionScan TCGA_RNA-Seq C19orf10-MAP2K3 C19orf10 chr19 4659942 - MAP2K3 chr17 21201724 + Exonic hg19 SARC TCGA-FX-A3TO 2 In-Frame Inter-chr p11.2 STE:STE7 12360 ChimerSeq FusionScan TCGA_RNA-Seq C12orf5-PTPN6 C12orf5 chr12 4430469 + PTPN6 chr12 7060771 + Exonic hg19 SARC TCGA-FX-A3TO 2 In-Frame Intra-chr p13.31 Tumor suppressor gene Seq+ 12361 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0355-PDCD2L KIAA0355 chr19 34745519 + PDCD2L chr19 34912423 + Exonic hg19 SARC TCGA-FX-A76Y 2 5'UTR-CDS Intra-chr q13.11 Seq+ 12362 ChimerSeq FusionScan TCGA_RNA-Seq PTPRS-ZNF20 PTPRS chr19 5274209 - ZNF20 chr19 12246710 - Exonic hg19 SARC TCGA-DX-A6Z0 2 In-Frame Intra-chr p13.3 p13.2 Transcription factor 12363 ChimerSeq FusionScan TCGA_RNA-Seq PTPRS-ZNF627 PTPRS chr19 5274209 - ZNF627 chr19 11725341 + Exonic hg19 SARC TCGA-DX-A6Z0 2 In-Frame Intra-chr p13.3 p13.2 Transcription factor Seq+ 12364 ChimerSeq FusionScan TCGA_RNA-Seq UBE3C-PTPRN2 UBE3C chr7 156932032 + PTPRN2 chr7 157931207 - Exonic hg19 SARC TCGA-DX-A6Z0 2 Out-of-Frame Intra-chr q36.3 q36.3 Seq+ 12365 ChimerSeq FusionScan TCGA_RNA-Seq EIF3C-RCN3 EIF3C chr16 28700149 + RCN3 chr19 50040289 + Exonic hg19 SARC TCGA-DX-A6Z0 2 5'UTR-CDS Inter-chr p11.2 q13.33 12366 ChimerSeq FusionScan TCGA_RNA-Seq STXBP6-ZNF410 STXBP6 chr14 25443870 - ZNF410 chr14 74370662 + Exonic hg19 SARC TCGA-DX-A6YT 2 In-Frame Intra-chr q12 q24.3 Transcription factor Seq+ 12367 ChimerSeq FusionScan TCGA_RNA-Seq ZC3H7A-PARVA ZC3H7A chr16 11890979 - PARVA chr11 12495291 + Exonic hg19 SARC TCGA-DX-A7EM 2 5'UTR-CDS Inter-chr p13.13 p15.3 12368 ChimerSeq FusionScan TCGA_RNA-Seq NCK1-IL20RB NCK1 chr3 136647069 + IL20RB chr3 136708282 + Exonic hg19 SARC TCGA-IF-A4AJ 2 In-Frame Intra-chr q22.3 q22.3 Seq+ 12369 ChimerSeq FusionScan TCGA_RNA-Seq FLJ43663-FMO3 FLJ43663 chr7 130737183 - FMO3 chr1 171061793 + Exonic hg19 SARC TCGA-DX-A1L2 3 3'UTR-5'UTR Inter-chr q24.3 12370 ChimerSeq FusionScan TCGA_RNA-Seq FLJ43663-C1orf61 FLJ43663 chr7 130737183 - C1orf61 chr1 156374393 - Exonic hg19 SARC TCGA-DX-A1L2 2 3'UTR-CDS Inter-chr q22 12371 ChimerSeq FusionScan TCGA_RNA-Seq TGFBR2-XPC TGFBR2 chr3 30648469 + XPC chr3 14214562 - Exonic hg19 SARC TCGA-DX-A1L2 2 In-Frame Intra-chr p24.1 Oncogene Tumor suppressor gene p25.1 Oncogene Seq+ 12372 ChimerSeq FusionScan TCGA_RNA-Seq SS18-SSX1 SS18 chr18 23612362 - SSX1 chrX 48123216 + Exonic hg19 SARC TCGA-DX-A7ER 2 In-Frame Inter-chr q11.2 p11.23 Oncogene KB Pub Seq+ 12373 ChimerSeq FusionScan TCGA_RNA-Seq SS18-SSX8 SS18 chr18 23612362 - SSX8 chrX 52659320 + Exonic hg19 SARC TCGA-DX-A7ER 2 CDS-5'UTR Inter-chr q11.2 p11.22 12374 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-TMTC2 FRS2 chr12 69925836 + TMTC2 chr12 83379703 + Exonic hg19 SARC TCGA-FX-A2QS 9 5'UTR-CDS Intra-chr q15 q21.31 Seq+ 12375 ChimerSeq FusionScan TCGA_RNA-Seq RASSF3-STK10 RASSF3 chr12 65004523 + STK10 chr5 171491816 - Exonic hg19 SARC TCGA-FX-A2QS 8 In-Frame Inter-chr q14.2 Tumor suppressor gene q35.1 Tumor suppressor gene Seq+ 12376 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-COL9A1 CPSF6 chr12 69633486 + COL9A1 chr6 70926784 - Exonic hg19 SARC TCGA-FX-A2QS 7 Out-of-Frame Inter-chr q15 q13 Seq+ 12377 ChimerSeq FusionScan TCGA_RNA-Seq DAP-SEMA5A DAP chr5 10761125 - SEMA5A chr5 9066758 - Exonic hg19 SARC TCGA-FX-A2QS 6 Out-of-Frame Intra-chr p15.2 p15.31 Seq+ 12378 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB44-FRS2 ZBTB44 chr11 130184269 - FRS2 chr12 69955959 + Exonic hg19 SARC TCGA-FX-A2QS 4 5'UTR-5'UTR Inter-chr q24.3 Transcription factor q15 Seq+ 12379 ChimerSeq FusionScan TCGA_RNA-Seq JAZF1-EVX1 JAZF1 chr7 28220081 - EVX1 chr7 27284666 + Exonic hg19 SARC TCGA-FX-A2QS 4 In-Frame Intra-chr p15.1 Transcription factor p15.2 Transcription factor Seq+ 12380 ChimerSeq FusionScan TCGA_RNA-Seq OTOGL-HMGA2 OTOGL chr12 80699475 + HMGA2 chr12 66221780 + Exonic hg19 SARC TCGA-FX-A2QS 3 In-Frame Intra-chr q21.31 q14.3 Transcription factor Seq+ 12381 ChimerSeq FusionScan TCGA_RNA-Seq BCL9-BEST3 BCL9 chr1 147013444 + BEST3 chr12 70049593 - Exonic hg19 SARC TCGA-FX-A2QS 3 5'UTR-CDS Inter-chr q21.2 Oncogene q15 Seq+ 12382 ChimerSeq FusionScan TCGA_RNA-Seq KCNN3-YEATS4 KCNN3 chr1 154705478 - YEATS4 chr12 69756567 + Exonic hg19 SARC TCGA-FX-A2QS 3 In-Frame Inter-chr q21.3 q15 Seq+ 12383 ChimerSeq FusionScan TCGA_RNA-Seq CNOT2-GPR50 CNOT2 chr12 70637260 + GPR50 chrX 150348242 + Exonic hg19 SARC TCGA-FX-A2QS 2 5'UTR-CDS Inter-chr q15 q28 12384 ChimerSeq FusionScan TCGA_RNA-Seq FLJ16171-SKAP2 FLJ16171 chr5 174403451 - SKAP2 chr7 26779583 - Exonic hg19 SARC TCGA-FX-A2QS 2 3'UTR-CDS Inter-chr p15.2 12385 ChimerSeq FusionScan TCGA_RNA-Seq ETS1-UBE2V2 ETS1 chr11 128391807 - UBE2V2 chr8 48955592 + Exonic hg19 SARC TCGA-FX-A2QS 2 In-Frame Inter-chr q24.3 Oncogene Transcription factor q11.21 Seq+ 12386 ChimerSeq FusionScan TCGA_RNA-Seq TRERF1-HYDIN TRERF1 chr6 42418914 - HYDIN chr16 70975722 - Exonic hg19 SARC TCGA-FX-A2QS 2 5'UTR-CDS Inter-chr p21.1 Transcription factor Seq+ 12387 ChimerSeq FusionScan TCGA_RNA-Seq TAX1BP1-SYT1 TAX1BP1 chr7 27827222 + SYT1 chr12 79611282 + Exonic hg19 SARC TCGA-FX-A2QS 2 CDS-5'UTR Inter-chr p15.2 q21.2 Seq+ 12388 ChimerSeq FusionScan TCGA_RNA-Seq PPFIA2-OTOGL PPFIA2 chr12 82147751 - OTOGL chr12 80696413 + Exonic hg19 SARC TCGA-FX-A2QS 2 In-Frame Intra-chr q21.31 q21.31 Seq+ 12389 ChimerSeq FusionScan TCGA_RNA-Seq SLC7A5-NOS1AP SLC7A5 chr16 87902490 - NOS1AP chr1 162124194 + Exonic hg19 SARC TCGA-FX-A2QS 2 Out-of-Frame Inter-chr q24.2 q23.3 Seq+ 12390 ChimerSeq FusionScan TCGA_RNA-Seq PABPC1-PEX13 PABPC1 chr8 101716524 - PEX13 chr2 61258553 + Exonic hg19 SARC TCGA-FX-A2QS 2 3'UTR-CDS Inter-chr q22.3 p15 12391 ChimerSeq FusionScan TCGA_RNA-Seq PTPRR-NAV3 PTPRR chr12 71077906 - NAV3 chr12 78360008 + Exonic hg19 SARC TCGA-FX-A2QS 2 In-Frame Intra-chr q15 q21.2 Seq+ 12392 ChimerSeq FusionScan TCGA_RNA-Seq ZNF528-RANBP3L ZNF528 chr19 52909286 + RANBP3L chr5 36271413 - Exonic hg19 SARC TCGA-FX-A2QS 2 In-Frame Inter-chr q13.41 Transcription factor p13.2 12393 ChimerSeq FusionScan TCGA_RNA-Seq DCAF6-HMCN1 DCAF6 chr1 168014465 + HMCN1 chr1 185815157 + Exonic hg19 SARC TCGA-FX-A2QS 2 Out-of-Frame Intra-chr q24.2 q25.3 Seq+ 12394 ChimerSeq FusionScan TCGA_RNA-Seq PPFIA2-HMGA2 PPFIA2 chr12 82147751 - HMGA2 chr12 66221780 + Exonic hg19 SARC TCGA-FX-A2QS 2 In-Frame Intra-chr q21.31 q14.3 Transcription factor 12395 ChimerSeq FusionScan TCGA_RNA-Seq ACVR2A-SUMO1 ACVR2A chr2 148680680 + SUMO1 chr2 203072044 - Exonic hg19 SARC TCGA-FX-A2QS 2 Out-of-Frame Intra-chr q22.3 Oncogene q33.1 Seq+ 12396 ChimerSeq FusionScan TCGA_RNA-Seq IFI16-UAP1 IFI16 chr1 158986490 + UAP1 chr1 162546566 + Exonic hg19 SARC TCGA-DX-A6YV 3 Out-of-Frame Intra-chr q23.1 Tumor suppressor gene q23.3 Seq+ 12397 ChimerSeq FusionScan TCGA_RNA-Seq GLI2-SPOP GLI2 chr2 121685042 + SPOP chr17 47700238 - Exonic hg19 SARC TCGA-DX-A6YV 3 CDS-5'UTR Inter-chr q14.2 Transcription factor q21.33 Oncogene Tumor suppressor gene Seq+ 12398 ChimerSeq FusionScan TCGA_RNA-Seq GRK6-B4GALT7 GRK6 chr5 176853898 + B4GALT7 chr5 177034302 + Exonic hg19 SARC TCGA-DX-A6YV 2 Out-of-Frame Intra-chr q35.3 q35.3 Seq+ 12399 ChimerSeq FusionScan TCGA_RNA-Seq ZNF700-RAD23A ZNF700 chr19 12036088 + RAD23A chr19 13063502 + Exonic hg19 SARC TCGA-HS-A5N9 4 In-Frame Intra-chr p13.2 Transcription factor p13.13 Seq+ 12400 ChimerSeq FusionScan TCGA_RNA-Seq KPNA6-TRAIP KPNA6 chr1 32573735 + TRAIP chr3 49885633 - Exonic hg19 SARC TCGA-HS-A5N9 3 Out-of-Frame Inter-chr p35.2 p21.31 Seq+ 12401 ChimerSeq FusionScan TCGA_RNA-Seq HMGA2-SARNP HMGA2 chr12 66345195 + SARNP chr12 56146624 - Exonic hg19 SARC TCGA-DX-A2J1 8 CDS-3'UTR Intra-chr q14.3 Transcription factor q13.2 Seq+ 12402 ChimerSeq FusionScan TCGA_RNA-Seq ORMDL2-SARNP ORMDL2 chr12 56211896 + SARNP chr12 56151337 - Exonic hg19 SARC TCGA-DX-A2J1 5 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 12403 ChimerSeq FusionScan TCGA_RNA-Seq CDK19-LYZ CDK19 chr6 110988636 - LYZ chr12 69743887 + Exonic hg19 SARC TCGA-DX-A2J1 2 Out-of-Frame Inter-chr q21 q15 Seq+ 12404 ChimerSeq FusionScan TCGA_RNA-Seq SMURF2-NUDT3 SMURF2 chr17 62657946 - NUDT3 chr6 34263462 - Exonic hg19 SARC TCGA-DX-A2J1 2 Out-of-Frame Inter-chr q24.1 p21.31 12405 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 SARC TCGA-X6-A7WB 2 Out-of-Frame Intra-chr q22.2 q22.2 12406 ChimerSeq FusionScan TCGA_RNA-Seq KLF12-CAMK2G KLF12 chr13 74518117 - CAMK2G chr10 75577312 - Exonic hg19 SARC TCGA-X6-A7WB 2 Out-of-Frame Inter-chr q22.1 Transcription factor q22.2 Seq+ 12407 ChimerSeq FusionScan TCGA_RNA-Seq PAN3-EFHA1 PAN3 chr13 28794515 + EFHA1 chr13 22096789 - Exonic hg19 SARC TCGA-X6-A7W8 3 In-Frame Intra-chr q12.2 Seq+ 12408 ChimerSeq FusionScan TCGA_RNA-Seq MAP3K14-SRP68 MAP3K14 chr17 43362178 - SRP68 chr17 74063411 - Exonic hg19 SARC TCGA-X6-A7W8 2 In-Frame Intra-chr q21.31 q25.1 Seq+ 12409 ChimerSeq FusionScan TCGA_RNA-Seq PIEZO2-IMPA2 PIEZO2 chr18 10672686 - IMPA2 chr18 12030341 + Exonic hg19 SARC TCGA-X6-A7W8 2 Out-of-Frame Intra-chr p11.21 p11.21 Seq+ 12410 ChimerSeq FusionScan TCGA_RNA-Seq CHD4-CPM CHD4 chr12 6700631 - CPM chr12 69265736 - Exonic hg19 SARC TCGA-DX-A23R 16 Out-of-Frame Intra-chr p13.31 q15 Seq+ 12411 ChimerSeq FusionScan TCGA_RNA-Seq LIN7A-TWF1 LIN7A chr12 81239508 - TWF1 chr12 44198375 - Exonic hg19 SARC TCGA-DX-A23R 5 Out-of-Frame Intra-chr q21.31 q12 12412 ChimerSeq FusionScan TCGA_RNA-Seq CACNA1C-EEA1 CACNA1C chr12 2229596 + EEA1 chr12 93213287 - Exonic hg19 SARC TCGA-DX-A23R 4 In-Frame Intra-chr p13.33 q22 Transcription factor Seq+ 12413 ChimerSeq FusionScan TCGA_RNA-Seq DERA-DNAJA2 DERA chr12 16064348 + DNAJA2 chr16 47005867 - Exonic hg19 SARC TCGA-DX-A23R 3 Out-of-Frame Inter-chr p12.3 q11.2 Seq+ 12414 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHG7-MRPL42 PLEKHG7 chr12 93135368 + MRPL42 chr12 93894951 + Exonic hg19 SARC TCGA-DX-A23R 3 Out-of-Frame Intra-chr q22 q22 Seq+ 12415 ChimerSeq FusionScan TCGA_RNA-Seq CACNA1C-EEA1 CACNA1C chr12 2229596 + EEA1 chr12 93220061 - Exonic hg19 SARC TCGA-DX-A23R 3 In-Frame Intra-chr p13.33 q22 Transcription factor Seq+ 12416 ChimerSeq FusionScan TCGA_RNA-Seq MDM2-ATF7 MDM2 chr12 69210725 + ATF7 chr12 53994805 - Exonic hg19 SARC TCGA-DX-A23R 2 CDS-5'UTR Intra-chr q15 Oncogene q13.13 Transcription factor 12417 ChimerSeq FusionScan TCGA_RNA-Seq C5orf62-SPARC C5orf62 chr5 150158534 + SPARC chr5 151055762 - Exonic hg19 SARC TCGA-DX-A23R 2 5'UTR-5'UTR Intra-chr q33.1 Tumor suppressor gene 12418 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPC-NDRG2 HNRNPC chr14 21698477 - NDRG2 chr14 21490038 - Exonic hg19 SARC TCGA-DX-A23R 2 In-Frame Intra-chr q11.2 q11.2 Tumor suppressor gene 12419 ChimerSeq FusionScan TCGA_RNA-Seq NUDT21-BBS2 NUDT21 chr16 56473568 - BBS2 chr16 56518779 - Exonic hg19 SARC TCGA-HS-A5N7 3 Out-of-Frame Intra-chr q13 q13 Seq+ 12420 ChimerSeq FusionScan TCGA_RNA-Seq ROCK1-LAMP5 ROCK1 chr18 18619432 - LAMP5 chr20 9510288 + Exonic hg19 SARC TCGA-QQ-A5V9 4 In-Frame Inter-chr q11.1 AGC:DMPK p12.2 Seq+ 12421 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF40-SCOC ARHGEF40 chr14 21557035 + SCOC chr4 141300274 + Exonic hg19 SARC TCGA-DX-A2J0 2 3'UTR-CDS Inter-chr q11.2 q31.1 12422 ChimerSeq FusionScan TCGA_RNA-Seq ELK3-CDK17 ELK3 chr12 96617551 + CDK17 chr12 96694138 - Exonic hg19 SARC TCGA-DX-A2J0 2 In-Frame Intra-chr q23.1 Transcription factor q23.1 Seq+ 12423 ChimerSeq FusionScan TCGA_RNA-Seq C12orf26-GALNT9 C12orf26 chr12 82796909 + GALNT9 chr12 132863016 - Exonic hg19 SARC TCGA-DX-A2J0 2 In-Frame Intra-chr q24.33 Seq+ 12424 ChimerSeq FusionScan TCGA_RNA-Seq C21orf91-GLT25D2 C21orf91 chr21 19190508 - GLT25D2 chr1 183914698 - Exonic hg19 SARC TCGA-DX-A2J0 2 Out-of-Frame Inter-chr q21.1 Seq+ 12425 ChimerSeq FusionScan TCGA_RNA-Seq ZNF318-CD2AP ZNF318 chr6 43336704 - CD2AP chr6 47548599 + Exonic hg19 SARC TCGA-DX-A3LU 2 In-Frame Intra-chr p21.1 Transcription factor p12.3 Seq+ 12426 ChimerSeq FusionScan TCGA_RNA-Seq SS18-SSX1 SS18 chr18 23612362 - SSX1 chrX 48123216 + Exonic hg19 SARC TCGA-MJ-A850 4 In-Frame Inter-chr q11.2 p11.23 Oncogene KB Pub Seq+ 12427 ChimerSeq FusionScan TCGA_RNA-Seq SS18-SSX8 SS18 chr18 23612362 - SSX8 chrX 52659320 + Exonic hg19 SARC TCGA-MJ-A850 4 CDS-5'UTR Inter-chr q11.2 p11.22 12428 ChimerSeq FusionScan TCGA_RNA-Seq FAM102A-RAD23B FAM102A chr9 130742270 - RAD23B chr9 110081032 + Exonic hg19 SARC TCGA-K1-A6RU 5 Out-of-Frame Intra-chr q34.11 q31.2 Tumor suppressor gene Seq+ 12429 ChimerSeq FusionScan TCGA_RNA-Seq SPTAN1-TBC1D13 SPTAN1 chr9 131314975 + TBC1D13 chr9 131550612 + Exonic hg19 SARC TCGA-K1-A6RU 3 5'UTR-CDS Intra-chr q34.11 q34.11 Seq+ 12430 ChimerSeq FusionScan TCGA_RNA-Seq PHF20-ZHX3 PHF20 chr20 34360001 + ZHX3 chr20 39897723 - Exonic hg19 SARC TCGA-K1-A6RU 3 5'UTR-5'UTR Intra-chr q11.22 Transcription factor q12 Transcription factor 12431 ChimerSeq FusionScan TCGA_RNA-Seq SVEP1-TJP2 SVEP1 chr9 113275205 - TJP2 chr9 71864290 + Exonic hg19 SARC TCGA-K1-A6RU 3 Out-of-Frame Intra-chr q31.3 q21.11 Seq+ 12432 ChimerSeq FusionScan TCGA_RNA-Seq SULF2-TSHZ2 SULF2 chr20 46365446 - TSHZ2 chr20 52103682 + Exonic hg19 SARC TCGA-K1-A6RU 2 CDS-3'UTR Intra-chr q13.12 q13.2 Transcription factor Seq+ 12433 ChimerSeq FusionScan TCGA_RNA-Seq CORO1C-RBFOX1 CORO1C chr12 109094899 - RBFOX1 chr16 7568148 + Exonic hg19 SARC TCGA-K1-A6RU 2 In-Frame Inter-chr q24.11 p13.3 Seq+ 12434 ChimerSeq FusionScan TCGA_RNA-Seq FGF2-FREM3 FGF2 chr4 123748507 + FREM3 chr4 144548913 - Exonic hg19 SARC TCGA-DX-A1L1 2 In-Frame Intra-chr q28.1 q31.21 Seq+ 12435 ChimerSeq FusionScan TCGA_RNA-Seq NDUFB9-TEX264 NDUFB9 chr8 125559354 + TEX264 chr3 51733421 + Exonic hg19 SARC TCGA-IS-A3KA 2 In-Frame Inter-chr q24.13 p21.2 12436 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KA3-KDM6A RPS6KA3 chrX 20284681 - KDM6A chrX 44966654 + Exonic hg19 SARC TCGA-DX-A3UC 4 Out-of-Frame Intra-chr p22.12 p11.3 Oncogene Tumor suppressor gene Seq+ 12437 ChimerSeq FusionScan TCGA_RNA-Seq DYRK2-CNTN2 DYRK2 chr12 68043725 + CNTN2 chr1 205022227 + Exonic hg19 SARC TCGA-DX-A3U6 4 CDS-5'UTR Inter-chr q15 CMGC:DYRK q32.1 Seq+ 12438 ChimerSeq FusionScan TCGA_RNA-Seq DYRK2-CNTN2 DYRK2 chr12 68042962 + CNTN2 chr1 205022227 + Exonic hg19 SARC TCGA-DX-A3U6 2 5'UTR-5'UTR Inter-chr q15 CMGC:DYRK q32.1 Seq+ 12439 ChimerSeq FusionScan TCGA_RNA-Seq LRP1-CAND1 LRP1 chr12 57596320 + CAND1 chr12 67686401 + Exonic hg19 SARC TCGA-DX-A3U6 2 Out-of-Frame Intra-chr q13.3 q14.3 Seq+ 12440 ChimerSeq FusionScan TCGA_RNA-Seq GNA12-CUL1 GNA12 chr7 2834561 - CUL1 chr7 148427053 + Exonic hg19 SARC TCGA-JV-A75J 4 CDS-5'UTR Intra-chr p22.2 q36.1 Tumor suppressor gene Seq+ 12441 ChimerSeq FusionScan TCGA_RNA-Seq NF1-RPTOR NF1 chr17 29422387 + RPTOR chr17 78599490 + Exonic hg19 SARC TCGA-JV-A75J 3 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q25.3 Seq+ 12442 ChimerSeq FusionScan TCGA_RNA-Seq NSMCE2-COL22A1 NSMCE2 chr8 126194498 + COL22A1 chr8 139856401 - Exonic hg19 SARC TCGA-JV-A75J 3 In-Frame Intra-chr q24.13 q24.3 Seq+ 12443 ChimerSeq FusionScan TCGA_RNA-Seq PSMD1-PMS1 PSMD1 chr2 231951895 + PMS1 chr2 190656515 + Exonic hg19 SARC TCGA-QQ-A5V2 2 5'UTR-5'UTR Intra-chr q37.1 q32.2 Oncogene 12444 ChimerSeq FusionScan TCGA_RNA-Seq MRPL18-C6orf118 MRPL18 chr6 160212158 + C6orf118 chr6 165703556 - Exonic hg19 SARC TCGA-QC-A6FX 3 Out-of-Frame Intra-chr q25.3 q27 Seq+ 12445 ChimerSeq FusionScan TCGA_RNA-Seq XYLT1-FAM86C1 XYLT1 chr16 17564290 - FAM86C1 chr11 71500828 + Exonic hg19 SARC TCGA-QC-A6FX 2 In-Frame Inter-chr p12.3 q13.4 12446 ChimerSeq FusionScan TCGA_RNA-Seq SNX9-SERAC1 SNX9 chr6 158349734 + SERAC1 chr6 158579396 - Exonic hg19 SARC TCGA-QC-A6FX 2 CDS-5'UTR Intra-chr q25.3 q25.3 Seq+ 12447 ChimerSeq FusionScan TCGA_RNA-Seq STXBP5-SASH1 STXBP5 chr6 147560406 + SASH1 chr6 148789680 + Exonic hg19 SARC TCGA-QC-A6FX 2 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene Seq+ 12448 ChimerSeq FusionScan TCGA_RNA-Seq SS18-SSX8 SS18 chr18 23612362 - SSX8 chrX 52659320 + Exonic hg19 SARC TCGA-DX-A7EO 2 CDS-5'UTR Inter-chr q11.2 p11.22 12449 ChimerSeq FusionScan TCGA_RNA-Seq SS18-SSX1 SS18 chr18 23612362 - SSX1 chrX 48123216 + Exonic hg19 SARC TCGA-DX-A7EO 2 In-Frame Inter-chr q11.2 p11.23 Oncogene KB Pub Seq+ 12450 ChimerSeq FusionScan TCGA_RNA-Seq HSP90B1-TMEM19 HSP90B1 chr12 104328065 + TMEM19 chr12 72083370 + Exonic hg19 SARC TCGA-DX-A2IZ 3 Out-of-Frame Intra-chr q23.3 Tumor suppressor gene q21.1 Seq+ 12451 ChimerSeq FusionScan TCGA_RNA-Seq FBXL7-NRD1 FBXL7 chr5 15616181 + NRD1 chr1 52299842 - Exonic hg19 SARC TCGA-DX-A2IZ 3 In-Frame Inter-chr p15.1 Seq+ 12452 ChimerSeq FusionScan TCGA_RNA-Seq RAP1B-SCYL2 RAP1B chr12 69004823 + SCYL2 chr12 100711580 + Exonic hg19 SARC TCGA-DX-A2IZ 2 5'UTR-CDS Intra-chr q15 q23.1 Other:SCY1 Seq+ 12453 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R13B-WIBG PPP1R13B chr14 104313635 - WIBG chr12 56297264 - Exonic hg19 SARC TCGA-DX-A2IZ 2 Out-of-Frame Inter-chr q32.33 12q13.2 Seq+ 12454 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-TSPAN31 CPSF6 chr12 69633486 + TSPAN31 chr12 58140371 + Exonic hg19 SARC TCGA-DX-A23Y 8 In-Frame Intra-chr q15 q14.1 Seq+ 12455 ChimerSeq FusionScan TCGA_RNA-Seq ACSS3-KRT77 ACSS3 chr12 81503483 + KRT77 chr12 53091680 - Exonic hg19 SARC TCGA-DX-A23Y 6 In-Frame Intra-chr q21.31 q13.13 12456 ChimerSeq FusionScan TCGA_RNA-Seq CCT2-DEPDC4 CCT2 chr12 69987393 + DEPDC4 chr12 100646314 - Exonic hg19 SARC TCGA-DX-A23Y 6 Out-of-Frame Intra-chr q15 q23.1 Seq+ 12457 ChimerSeq FusionScan TCGA_RNA-Seq POP4-CLEC2B POP4 chr19 30097232 + CLEC2B chr12 10010236 - Exonic hg19 SARC TCGA-DX-A23Y 6 In-Frame Inter-chr q12 p13.31 Seq+ 12458 ChimerSeq FusionScan TCGA_RNA-Seq NHSL1-PRDM1 NHSL1 chr6 138817355 - PRDM1 chr6 106536075 + Exonic hg19 SARC TCGA-DX-A23Y 5 CDS-5'UTR Intra-chr q24.1 q21 Oncogene Tumor suppressor gene Transcription factor Seq+ 12459 ChimerSeq FusionScan TCGA_RNA-Seq TTK-TMEM63B TTK chr6 80721265 + TMEM63B chr6 44119582 + Exonic hg19 SARC TCGA-DX-A23Y 4 In-Frame Intra-chr q14.1 Other:TTK p21.1 Seq+ 12460 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-TSPAN31 CPSF6 chr12 69633486 + TSPAN31 chr12 58139527 + Exonic hg19 SARC TCGA-DX-A23Y 3 In-Frame Intra-chr q15 q14.1 Seq+ 12461 ChimerSeq FusionScan TCGA_RNA-Seq PPFIA2-MRPL14 PPFIA2 chr12 82070569 - MRPL14 chr6 44084366 - Exonic hg19 SARC TCGA-DX-A23Y 3 CDS-5'UTR Inter-chr q21.31 p21.1 Seq+ 12462 ChimerSeq FusionScan TCGA_RNA-Seq TRMT61A-NDUFA12 TRMT61A chr14 103999185 + NDUFA12 chr12 95388033 - Exonic hg19 SARC TCGA-DX-A23Y 2 In-Frame Inter-chr q32.33 q22 Seq+ 12463 ChimerSeq FusionScan TCGA_RNA-Seq TFDP2-LONP2 TFDP2 chr3 141868024 - LONP2 chr16 48296688 + Exonic hg19 SARC TCGA-DX-A23Y 2 5'UTR-CDS Inter-chr q23 Transcription factor q12.1 Seq+ 12464 ChimerSeq FusionScan TCGA_RNA-Seq ACTG2-ALK ACTG2 chr2 74128564 + ALK chr2 29449940 - Exonic hg19 SARC TCGA-IW-A3M6 6 Out-of-Frame Intra-chr p13.1 p23.1 TK:ALK Oncogene Seq+ 12465 ChimerSeq FusionScan TCGA_RNA-Seq BNC2-KRT14 BNC2 chr9 16727794 - KRT14 chr17 39739392 - Exonic hg19 SARC TCGA-QQ-A5VB 3 Out-of-Frame Inter-chr p22.2 Transcription factor q21.2 12466 ChimerSeq FusionScan TCGA_RNA-Seq RAPGEF1-MAPKAP1 RAPGEF1 chr9 134518625 - MAPKAP1 chr9 128322088 - Exonic hg19 SARC TCGA-QQ-A5VB 2 In-Frame Intra-chr q34.13 q33.3 12467 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF7-SPATA7 ARHGEF7 chr13 111940790 + SPATA7 chr14 88883054 + Exonic hg19 SARC TCGA-SI-A71O 2 In-Frame Inter-chr q34 q31.3 Seq+ 12468 ChimerSeq FusionScan TCGA_RNA-Seq ADNP-PHF20 ADNP chr20 49547362 - PHF20 chr20 34446223 + Exonic hg19 SARC TCGA-SI-A71O 2 5'UTR-CDS Intra-chr q13.13 Transcription factor q11.22 Transcription factor 12469 ChimerSeq FusionScan TCGA_RNA-Seq RAB21-DNM3 RAB21 chr12 72149068 + DNM3 chr1 172050971 + Exonic hg19 SARC TCGA-SG-A6Z7 6 In-Frame Inter-chr q21.1 q24.3 Seq+ 12470 ChimerSeq FusionScan TCGA_RNA-Seq KCNMB4-ARHGAP9 KCNMB4 chr12 70760850 + ARHGAP9 chr12 57871052 - Exonic hg19 SARC TCGA-SG-A6Z7 4 In-Frame Intra-chr q15 q13.3 Seq+ 12471 ChimerSeq FusionScan TCGA_RNA-Seq SYT1-EPYC SYT1 chr12 79441142 + EPYC chr12 91396355 - Exonic hg19 SARC TCGA-SG-A6Z7 3 5'UTR-5'UTR Intra-chr q21.2 q21.33 Seq+ 12472 ChimerSeq FusionScan TCGA_RNA-Seq RAB21-SLC4A8 RAB21 chr12 72167802 + SLC4A8 chr12 51863397 + Exonic hg19 SARC TCGA-SG-A6Z7 3 Out-of-Frame Intra-chr q21.1 q13.13 Seq+ 12473 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 SARC TCGA-SG-A6Z7 2 Out-of-Frame Intra-chr q22.2 q22.2 12474 ChimerSeq FusionScan TCGA_RNA-Seq MORF4L1-TBC1D2B MORF4L1 chr15 79165399 + TBC1D2B chr15 78322512 - Exonic hg19 SARC TCGA-MO-A47P 2 Out-of-Frame Intra-chr q25.1 q25.1 12475 ChimerSeq FusionScan TCGA_RNA-Seq LSS-EIF4ENIF1 LSS chr21 47625749 - EIF4ENIF1 chr22 31859953 - Exonic hg19 SARC TCGA-IF-A4AK 2 Out-of-Frame Inter-chr q22.3 q12.2 Seq+ 12476 ChimerSeq FusionScan TCGA_RNA-Seq DOCK7-NMT2 DOCK7 chr1 63153897 - NMT2 chr10 15183556 - Exonic hg19 SARC TCGA-IF-A4AK 2 In-Frame Inter-chr p31.3 p13 Seq+ 12477 ChimerSeq FusionScan TCGA_RNA-Seq LATS2-MYLK LATS2 chr13 21635484 - MYLK chr3 123386034 - Exonic hg19 SARC TCGA-K1-A42X 4 5'UTR-CDS Inter-chr q12.11 AGC:NDR Tumor suppressor gene q21.1 Seq+ 12478 ChimerSeq FusionScan TCGA_RNA-Seq TOPBP1-SPDEF TOPBP1 chr3 133341934 - SPDEF chr6 34512261 - Exonic hg19 SARC TCGA-K1-A42X 2 CDS-5'UTR Inter-chr q22.1 p21.31 Transcription factor Seq+ 12479 ChimerSeq FusionScan TCGA_RNA-Seq SC5DL-SPA17 SC5DL chr11 121163525 + SPA17 chr11 124545133 + Exonic hg19 SARC TCGA-DX-A23Z 15 5'UTR-5'UTR Intra-chr q24.2 Seq+ 12480 ChimerSeq FusionScan TCGA_RNA-Seq CIZ1-PTGES2 CIZ1 chr9 130947825 - PTGES2 chr9 130885413 - Exonic hg19 SARC TCGA-DX-A23Z 7 Out-of-Frame Intra-chr q34.11 Tumor suppressor gene q34.11 12481 ChimerSeq FusionScan TCGA_RNA-Seq SC5DL-SPA17 SC5DL chr11 121163525 + SPA17 chr11 124551284 + Exonic hg19 SARC TCGA-DX-A23Z 3 5'UTR-CDS Intra-chr q24.2 Seq+ 12482 ChimerSeq FusionScan TCGA_RNA-Seq TRIM27-PTPRR TRIM27 chr6 28879472 - PTPRR chr12 71050597 - Exonic hg19 SARC TCGA-DX-A23Z 2 5'UTR-CDS Inter-chr q15 Seq+ 12483 ChimerSeq FusionScan TCGA_RNA-Seq ARFGEF1-CCDC94 ARFGEF1 chr8 68123717 - CCDC94 chr19 4261990 + Exonic hg19 SARC TCGA-DX-A23Z 2 Out-of-Frame Inter-chr q13.2 p13.3 Seq+ 12484 ChimerSeq FusionScan TCGA_RNA-Seq PTPN11-EPYC PTPN11 chr12 112893867 + EPYC chr12 91372039 - Exonic hg19 SARC TCGA-DX-A1KW 9 In-Frame Intra-chr q24.13 Oncogene Tumor suppressor gene q21.33 Seq+ 12485 ChimerSeq FusionScan TCGA_RNA-Seq PWP1-CCDC63 PWP1 chr12 108098524 + CCDC63 chr12 111330879 + Exonic hg19 SARC TCGA-DX-A1KW 2 In-Frame Intra-chr q23.3 q24.11 Seq+ 12486 ChimerSeq FusionScan TCGA_RNA-Seq PTPN11-EPYC PTPN11 chr12 112892484 + EPYC chr12 91372039 - Exonic hg19 SARC TCGA-DX-A1KW 2 In-Frame Intra-chr q24.13 Oncogene Tumor suppressor gene q21.33 Seq+ 12487 ChimerSeq FusionScan TCGA_RNA-Seq TPM3-NTRK1 TPM3 chr1 154142875 - NTRK1 chr1 156845311 + Exonic hg19 SARC TCGA-DX-A3UA 4 In-Frame Intra-chr q21.3 q23.1 Oncogene KB Pub Seq+ 12488 ChimerSeq FusionScan TCGA_RNA-Seq TPM4-NTRK1 TPM4 chr19 16204563 + NTRK1 chr1 156845311 + Exonic hg19 SARC TCGA-DX-A3UA 4 In-Frame Inter-chr p13.12 q23.1 Oncogene 12489 ChimerSeq FusionScan TCGA_RNA-Seq TPM4-NTRK1 TPM4 chr19 16204563 + NTRK1 chr1 156845871 + Exonic hg19 SARC TCGA-DX-A3UA 3 In-Frame Inter-chr p13.12 q23.1 Oncogene 12490 ChimerSeq FusionScan TCGA_RNA-Seq TPM3-NTRK1 TPM3 chr1 154142875 - NTRK1 chr1 156845871 + Exonic hg19 SARC TCGA-DX-A3UA 3 In-Frame Intra-chr q21.3 q23.1 Oncogene KB Pub Seq+ 12491 ChimerSeq FusionScan TCGA_RNA-Seq WNK1-ATP6V1G1 WNK1 chr12 998389 + ATP6V1G1 chr9 117359849 + Exonic hg19 SARC TCGA-DX-A3UA 2 In-Frame Inter-chr p13.33 q32 12492 ChimerSeq FusionScan TCGA_RNA-Seq SETD7-ACAD11 SETD7 chr4 140439038 - ACAD11 chr3 132363740 - Exonic hg19 SARC TCGA-DX-A3UA 2 In-Frame Inter-chr q31.1 q22.1 Seq+ 12493 ChimerSeq FusionScan TCGA_RNA-Seq ITSN1-HNRNPUL1 ITSN1 chr21 35127702 + HNRNPUL1 chr19 41808569 + Exonic hg19 SARC TCGA-DX-A3UA 2 In-Frame Inter-chr q22.11 q13.2 Seq+ 12494 ChimerSeq FusionScan TCGA_RNA-Seq RMND1-MTHFD1L RMND1 chr6 151773150 - MTHFD1L chr6 151226785 + Exonic hg19 SARC TCGA-HB-A3YV 8 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 12495 ChimerSeq FusionScan TCGA_RNA-Seq WDFY3-PLAGL1 WDFY3 chr4 85887361 - PLAGL1 chr6 144290115 - Exonic hg19 SARC TCGA-HB-A3YV 6 5'UTR-5'UTR Inter-chr q21.23 q24.2 Tumor suppressor gene Transcription factor Seq+ 12496 ChimerSeq FusionScan TCGA_RNA-Seq VMP1-TK1 VMP1 chr17 57785109 + TK1 chr17 76171699 - Exonic hg19 SARC TCGA-HB-A3YV 5 5'UTR-CDS Intra-chr q23.1 q25.3 Seq+ 12497 ChimerSeq FusionScan TCGA_RNA-Seq GRIK2-RNF217 GRIK2 chr6 102376507 + RNF217 chr6 125366356 + Exonic hg19 SARC TCGA-HB-A3YV 5 In-Frame Intra-chr q16.3 q22.31 Seq+ 12498 ChimerSeq FusionScan TCGA_RNA-Seq LAMA2-GRIK2 LAMA2 chr6 129513998 + GRIK2 chr6 102124497 + Exonic hg19 SARC TCGA-HB-A3YV 4 Out-of-Frame Intra-chr q22.33 q16.3 Seq+ 12499 ChimerSeq FusionScan TCGA_RNA-Seq GNA11-TMCO3 GNA11 chr19 3094785 + TMCO3 chr13 114174930 + Exonic hg19 SARC TCGA-HB-A3YV 3 In-Frame Inter-chr p13.3 Oncogene q34 Seq+ 12500 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 SARC TCGA-HB-A3YV 3 Out-of-Frame Intra-chr q22.2 q22.2 12501 ChimerSeq FusionScan TCGA_RNA-Seq AKAP12-ASCC3 AKAP12 chr6 151561859 + ASCC3 chr6 100988263 - Exonic hg19 SARC TCGA-HB-A3YV 3 In-Frame Intra-chr q25.1 Tumor suppressor gene q16.3 Seq+ 12502 ChimerSeq FusionScan TCGA_RNA-Seq GNA11-TMCO3 GNA11 chr19 3094785 + TMCO3 chr13 114193671 + Exonic hg19 SARC TCGA-HB-A3YV 2 Out-of-Frame Inter-chr p13.3 Oncogene q34 Seq+ 12503 ChimerSeq FusionScan TCGA_RNA-Seq SCAF8-IL20RA SCAF8 chr6 155114110 + IL20RA chr6 137338240 - Exonic hg19 SARC TCGA-HB-A3YV 2 In-Frame Intra-chr q25.2 q23.3 Seq+ 12504 ChimerSeq FusionScan TCGA_RNA-Seq YEATS4-KIAA1244 YEATS4 chr12 69753803 + KIAA1244 chr6 138612869 + Exonic hg19 SARC TCGA-HB-A3YV 2 Out-of-Frame Inter-chr q15 Seq+ 12505 ChimerSeq FusionScan TCGA_RNA-Seq UTRN-WIF1 UTRN chr6 144809970 + WIF1 chr12 65471634 - Exonic hg19 SARC TCGA-HB-A3YV 2 In-Frame Inter-chr q24.2 q14.3 Tumor suppressor gene Seq+ 12506 ChimerSeq FusionScan TCGA_RNA-Seq SYT1-PPFIA2 SYT1 chr12 79441142 + PPFIA2 chr12 81851645 - Exonic hg19 SARC TCGA-HB-A3YV 2 5'UTR-CDS Intra-chr q21.2 q21.31 Seq+ 12507 ChimerSeq FusionScan TCGA_RNA-Seq NRIP1-TMLHE NRIP1 chr21 16386664 - TMLHE chrX 154722156 - Exonic hg19 SARC TCGA-DX-A3M2 2 5'UTR-CDS Inter-chr q21.1 q28 Seq+ 12508 ChimerSeq FusionScan TCGA_RNA-Seq MDM2-SYK MDM2 chr12 69203072 + SYK chr9 93657809 + Exonic hg19 SARC TCGA-DX-A3M1 10 Out-of-Frame Inter-chr q15 Oncogene q22.2 TK:Syk Oncogene Tumor suppressor gene Seq+ 12509 ChimerSeq FusionScan TCGA_RNA-Seq CTDSP2-AUH CTDSP2 chr12 58240154 - AUH chr9 93976707 - Exonic hg19 SARC TCGA-DX-A3M1 6 Out-of-Frame Inter-chr q14.1 q22.31 Seq+ 12510 ChimerSeq FusionScan TCGA_RNA-Seq NTN4-TRHDE NTN4 chr12 96104218 - TRHDE chr12 72680460 + Exonic hg19 SARC TCGA-DX-A3M1 3 Out-of-Frame Intra-chr q22 q21.1 Seq+ 12511 ChimerSeq FusionScan TCGA_RNA-Seq HMGA2-NR2C1 HMGA2 chr12 66232349 + NR2C1 chr12 95461167 - Exonic hg19 SARC TCGA-DX-A3M1 2 CDS-5'UTR Intra-chr q14.3 Transcription factor q22 Transcription factor Seq+ 12512 ChimerSeq FusionScan TCGA_RNA-Seq MRPL42-NTN4 MRPL42 chr12 93861330 + NTN4 chr12 96131922 - Exonic hg19 SARC TCGA-DX-A3M1 2 5'UTR-CDS Intra-chr q22 q22 Seq+ 12513 ChimerSeq FusionScan TCGA_RNA-Seq SKA2-HEATR6 SKA2 chr17 57232491 - HEATR6 chr17 58137457 - Exonic hg19 SARC TCGA-DX-A3M1 2 In-Frame Intra-chr q22 q23.1 Seq+ 12514 ChimerSeq FusionScan TCGA_RNA-Seq NEDD1-TMTC2 NEDD1 chr12 97331171 + TMTC2 chr12 83358802 + Exonic hg19 SARC TCGA-DX-A3M1 2 Out-of-Frame Intra-chr q23.1 q21.31 Seq+ 12515 ChimerSeq FusionScan TCGA_RNA-Seq C12orf65-EIF4EBP1 C12orf65 chr12 123718078 + EIF4EBP1 chr8 37914598 + Exonic hg19 SARC TCGA-DX-A3LS 10 5'UTR-CDS Inter-chr q24.31 p11.23 Seq+ 12516 ChimerSeq FusionScan TCGA_RNA-Seq NCOA6-LSM1 NCOA6 chr20 33356266 - LSM1 chr8 38029551 - Exonic hg19 SARC TCGA-DX-A3LS 6 In-Frame Inter-chr q11.22 p11.23 Seq+ 12517 ChimerSeq FusionScan TCGA_RNA-Seq COPZ1-GNPTAB COPZ1 chr12 54718965 + GNPTAB chr12 102190540 - Exonic hg19 SARC TCGA-DX-A3LS 3 In-Frame Intra-chr q13.13 q23.2 Seq+ 12518 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-SBNO1 FRS2 chr12 69864310 + SBNO1 chr12 123834988 - Exonic hg19 SARC TCGA-DX-A3LS 2 5'UTR-5'UTR Intra-chr q15 q24.31 Seq+ 12519 ChimerSeq FusionScan TCGA_RNA-Seq APPL2-MAN1A1 APPL2 chr12 105600838 - MAN1A1 chr6 119623268 - Exonic hg19 SARC TCGA-DX-A3LS 2 Out-of-Frame Inter-chr q23.3 q22.31 12520 ChimerSeq FusionScan TCGA_RNA-Seq GLIPR1L1-RAB3IP GLIPR1L1 chr12 75728682 + RAB3IP chr12 70149163 + Exonic hg19 SARC TCGA-DX-A3LS 2 Out-of-Frame Intra-chr q21.2 q15 Seq+ 12521 ChimerSeq FusionScan TCGA_RNA-Seq CAMKK2-PMCH CAMKK2 chr12 121734440 - PMCH chr12 102590949 - Exonic hg19 SARC TCGA-DX-A3LS 2 5'UTR-CDS Intra-chr q24.31 q23.2 Seq+ 12522 ChimerSeq FusionScan TCGA_RNA-Seq MDM2-CCNJL MDM2 chr12 69230529 + CCNJL chr5 159703419 - Exonic hg19 SARC TCGA-DX-A3LS 2 Out-of-Frame Inter-chr q15 Oncogene q33.3 12523 ChimerSeq FusionScan TCGA_RNA-Seq PCCA-GRM3 PCCA chr13 101167821 + GRM3 chr7 86415576 + Exonic hg19 SARC TCGA-SI-A71O 2 In-Frame Inter-chr q32.3 q21.11 12524 ChimerSeq FusionScan TCGA_RNA-Seq KAT7-F10 KAT7 chr17 47875920 + F10 chr13 113792770 + Exonic hg19 SARC TCGA-SI-A71O 2 Out-of-Frame Inter-chr q21.33 Transcription factor q34 Seq+ 12525 ChimerSeq FusionScan TCGA_RNA-Seq RALY-ATRN RALY chr20 32619410 + ATRN chr20 3515899 + Exonic hg19 SARC TCGA-SI-A71O 2 5'UTR-CDS Intra-chr q11.22 p13 Seq+ 12526 ChimerSeq FusionScan TCGA_RNA-Seq PID1-MRPS6 PID1 chr2 230020533 - MRPS6 chr21 35497640 + Exonic hg19 SARC TCGA-DX-A3U7 6 In-Frame Inter-chr q36.3 q22.11 Seq+ 12527 ChimerSeq FusionScan TCGA_RNA-Seq AGAP1-ATG4B AGAP1 chr2 236403493 + ATG4B chr2 242590424 + Exonic hg19 SARC TCGA-DX-A3U7 3 In-Frame Intra-chr q37.2 q37.3 Seq+ 12528 ChimerSeq FusionScan TCGA_RNA-Seq PID1-MRPS6 PID1 chr2 230020533 - MRPS6 chr21 35514707 + Exonic hg19 SARC TCGA-DX-A3U7 2 Out-of-Frame Inter-chr q36.3 q22.11 Seq+ 12529 ChimerSeq FusionScan TCGA_RNA-Seq CYB5D2-KIF22 CYB5D2 chr17 4047057 + KIF22 chr16 29814769 + Exonic hg19 SARC TCGA-DX-A3U7 2 5'UTR-CDS Inter-chr p13.2 p11.2 12530 ChimerSeq FusionScan TCGA_RNA-Seq PID1-MRPS6 PID1 chr2 230135729 - MRPS6 chr21 35497640 + Exonic hg19 SARC TCGA-DX-A3U7 2 In-Frame Inter-chr q36.3 q22.11 Seq+ 12531 ChimerSeq FusionScan TCGA_RNA-Seq NDEL1-UBAP1L NDEL1 chr17 8347675 + UBAP1L chr15 65398697 - Exonic hg19 SARC TCGA-DX-A3U7 2 CDS-5'UTR Inter-chr p13.1 q22.31 12532 ChimerSeq FusionScan TCGA_RNA-Seq HDAC7-SRGAP1 HDAC7 chr12 48181827 - SRGAP1 chr12 64536074 + Exonic hg19 SARC TCGA-DX-A3LT 5 In-Frame Intra-chr q13.11 q14.2 Seq+ 12533 ChimerSeq FusionScan TCGA_RNA-Seq NAP1L1-PTPRR NAP1L1 chr12 76478346 - PTPRR chr12 71158558 - Exonic hg19 SARC TCGA-DX-A3LT 2 5'UTR-CDS Intra-chr q21.2 q15 Seq+ 12534 ChimerSeq FusionScan TCGA_RNA-Seq ARNTL-RIC8B ARNTL chr11 13381971 + RIC8B chr12 107219503 + Exonic hg19 SARC TCGA-DX-A3LT 2 In-Frame Inter-chr p15.3 Tumor suppressor gene Transcription factor q23.3 Seq+ 12535 ChimerSeq FusionScan TCGA_RNA-Seq FAR1-C3orf55 FAR1 chr11 13722039 + C3orf55 chr3 157271018 + Exonic hg19 SARC TCGA-DX-A3LT 2 CDS-5'UTR Inter-chr p15.3 Seq+ 12536 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D15-CPM TBC1D15 chr12 72233591 + CPM chr12 69252851 - Exonic hg19 SARC TCGA-DX-A1KZ 8 Out-of-Frame Intra-chr q21.1 q15 Seq+ 12537 ChimerSeq FusionScan TCGA_RNA-Seq FBXL7-MRPL51 FBXL7 chr5 15500822 + MRPL51 chr12 6602138 - Exonic hg19 SARC TCGA-DX-A1KZ 4 In-Frame Inter-chr p15.1 p13.31 Seq+ 12538 ChimerSeq FusionScan TCGA_RNA-Seq PALM-TISP43 PALM chr19 740483 + TISP43 chr2 131296046 - Exonic hg19 SARC TCGA-DX-A1KZ 3 CDS-3'UTR Inter-chr p13.3 q21.1 Seq+ 12539 ChimerSeq FusionScan TCGA_RNA-Seq FHL1-TSPAN31 FHL1 chrX 135252139 + TSPAN31 chr12 58140371 + Exonic hg19 SARC TCGA-DX-A1KZ 3 5'UTR-CDS Inter-chr q26.3 Tumor suppressor gene q14.1 Seq+ 12540 ChimerSeq FusionScan TCGA_RNA-Seq METTL21B-PTPRR METTL21B chr12 58166911 + PTPRR chr12 71158558 - Exonic hg19 SARC TCGA-DX-A1KZ 2 Out-of-Frame Intra-chr q15 Seq+ 12541 ChimerSeq FusionScan TCGA_RNA-Seq TM7SF3-KCNC2 TM7SF3 chr12 27143382 - KCNC2 chr12 75445097 - Exonic hg19 SARC TCGA-DX-A1KZ 2 Out-of-Frame Intra-chr p11.23 q21.1 Seq+ 12542 ChimerSeq FusionScan TCGA_RNA-Seq WBP11-LGR5 WBP11 chr12 14953685 - LGR5 chr12 71898393 + Exonic hg19 SARC TCGA-DX-A1KZ 2 Out-of-Frame Intra-chr p12.3 q21.1 Seq+ 12543 ChimerSeq FusionScan TCGA_RNA-Seq TSPAN31-ITPR2 TSPAN31 chr12 58140503 + ITPR2 chr12 26648193 - Exonic hg19 SARC TCGA-DX-A1KZ 2 In-Frame Intra-chr q14.1 p11.23 Seq+ 12544 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHB2-GABRR1 PLEKHB2 chr2 131862971 + GABRR1 chr6 89910984 - Exonic hg19 SARC TCGA-DX-A1KZ 2 5'UTR-5'UTR Inter-chr q21.1 q15 Seq+ 12545 ChimerSeq FusionScan TCGA_RNA-Seq ANKH-STEAP3 ANKH chr5 14871460 - STEAP3 chr2 120003064 + Exonic hg19 SARC TCGA-DX-A1KZ 2 Out-of-Frame Inter-chr p15.2 q14.2 Seq+ 12546 ChimerSeq FusionScan TCGA_RNA-Seq MSH3-NENF MSH3 chr5 79952350 + NENF chr1 212619171 + Exonic hg19 SARC TCGA-DX-A1KZ 2 Out-of-Frame Inter-chr q14.1 q32.3 12547 ChimerSeq FusionScan TCGA_RNA-Seq TSFM-DOCK2 TSFM chr12 58186856 + DOCK2 chr5 169174399 + Exonic hg19 SARC TCGA-DX-A1KZ 2 Out-of-Frame Inter-chr q14.1 q35.1 Seq+ 12548 ChimerSeq FusionScan TCGA_RNA-Seq DMXL1-NANS DMXL1 chr5 118407351 + NANS chr9 100843097 + Exonic hg19 SARC TCGA-DX-A1KZ 2 In-Frame Inter-chr q23.1 q22.33 Seq+ 12549 ChimerSeq FusionScan TCGA_RNA-Seq FUNDC2-ITPR2 FUNDC2 chrX 154261828 + ITPR2 chr12 26943160 - Exonic hg19 SARC TCGA-DX-A1KZ 2 In-Frame Inter-chr q28 p11.23 12550 ChimerSeq FusionScan TCGA_RNA-Seq SRI-PIP4K2C SRI chr7 87840196 - PIP4K2C chr12 57987807 + Exonic hg19 SARC TCGA-DX-A6BH 7 In-Frame Inter-chr q21.12 q13.3 Seq+ 12551 ChimerSeq FusionScan TCGA_RNA-Seq CADPS2-XRCC6BP1 CADPS2 chr7 122526052 - XRCC6BP1 chr12 58345540 + Exonic hg19 SARC TCGA-DX-A6BH 3 In-Frame Inter-chr q31.32 Seq+ 12552 ChimerSeq FusionScan TCGA_RNA-Seq AKAP12-CCND3 AKAP12 chr6 151561859 + CCND3 chr6 41908323 - Exonic hg19 SARC TCGA-DX-A6BH 3 In-Frame Intra-chr q25.1 Tumor suppressor gene p21.1 Seq+ 12553 ChimerSeq FusionScan TCGA_RNA-Seq AASS-DNM3 AASS chr7 121731756 - DNM3 chr1 172100314 + Exonic hg19 SARC TCGA-DX-A6BH 3 In-Frame Inter-chr q31.32 q24.3 Seq+ 12554 ChimerSeq FusionScan TCGA_RNA-Seq TRERF1-GPR111 TRERF1 chr6 42418914 - GPR111 chr6 47641126 + Exonic hg19 SARC TCGA-DX-A6BH 2 5'UTR-5'UTR Intra-chr p21.1 Transcription factor Seq+ 12555 ChimerSeq FusionScan TCGA_RNA-Seq UTRN-LAMB4 UTRN chr6 144769905 + LAMB4 chr7 107678040 - Exonic hg19 SARC TCGA-DX-A6BH 2 Out-of-Frame Inter-chr q24.2 q31.1 Seq+ 12556 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-AKAP12 FRS2 chr12 69925836 + AKAP12 chr6 151626881 + Exonic hg19 SARC TCGA-DX-A6BH 2 5'UTR-CDS Inter-chr q15 q25.1 Tumor suppressor gene Seq+ 12557 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-GRM8 CPSF6 chr12 69656342 + GRM8 chr7 126746766 - Exonic hg19 SARC TCGA-DX-A6BH 2 3'UTR-3'UTR Inter-chr q15 q31.33 Oncogene Seq+ 12558 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175388437 - Exonic hg19 SARC TCGA-SI-A71Q 2 5'UTR-CDS Inter-chr q21.1 q35.2 12559 ChimerSeq FusionScan TCGA_RNA-Seq ADAMTS5-CYYR1 ADAMTS5 chr21 28315698 - CYYR1 chr21 27852748 - Exonic hg19 SARC TCGA-DX-A6YS 3 Out-of-Frame Intra-chr q21.3 q21.3 Seq+ 12560 ChimerSeq FusionScan TCGA_RNA-Seq CTNNA1-CYSTM1 CTNNA1 chr5 138119061 + CYSTM1 chr5 139622889 + Exonic hg19 SARC TCGA-DX-A6YS 2 In-Frame Intra-chr q31.2 Oncogene q31.3 Seq+ 12561 ChimerSeq FusionScan TCGA_RNA-Seq APPBP2-SETD2 APPBP2 chr17 58571826 - SETD2 chr3 47061330 - Exonic hg19 SARC TCGA-DX-A6YS 2 Out-of-Frame Inter-chr q23.2 p21.31 Oncogene Tumor suppressor gene Seq+ 12562 ChimerSeq FusionScan TCGA_RNA-Seq SETD2-RBM6 SETD2 chr3 47205343 - RBM6 chr3 50112633 + Exonic hg19 SARC TCGA-FX-A48G 4 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Tumor suppressor gene Seq+ 12563 ChimerSeq FusionScan TCGA_RNA-Seq CNTNAP3B-PRUNE2 CNTNAP3B chr9 43685379 + PRUNE2 chr9 79441648 - Exonic hg19 SARC TCGA-FX-A48G 2 In-Frame Intra-chr p11.2 q21.2 12564 ChimerSeq FusionScan TCGA_RNA-Seq PLXNC1-TXNRD1 PLXNC1 chr12 94676177 + TXNRD1 chr12 104742130 + Exonic hg19 SARC TCGA-DX-A3U5 8 In-Frame Intra-chr q22 Tumor suppressor gene q23.3 Seq+ 12565 ChimerSeq FusionScan TCGA_RNA-Seq PTPN11-OAS1 PTPN11 chr12 112888316 + OAS1 chr12 113348855 + Exonic hg19 SARC TCGA-DX-A3U5 5 Out-of-Frame Intra-chr q24.13 Oncogene Tumor suppressor gene q24.13 Seq+ 12566 ChimerSeq FusionScan TCGA_RNA-Seq PTPN11-OAS1 PTPN11 chr12 112888316 + OAS1 chr12 113354313 + Exonic hg19 SARC TCGA-DX-A3U5 5 Out-of-Frame Intra-chr q24.13 Oncogene Tumor suppressor gene q24.13 Seq+ 12567 ChimerSeq FusionScan TCGA_RNA-Seq BTBD2-KIAA1109 BTBD2 chr19 1990002 - KIAA1109 chr4 123107190 + Exonic hg19 SARC TCGA-DX-A3U5 4 In-Frame Inter-chr p13.3 q27 Seq+ 12568 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-SBF2 FRS2 chr12 69925836 + SBF2 chr11 9817504 - Exonic hg19 SARC TCGA-DX-A3U5 3 5'UTR-CDS Inter-chr q15 p15.4 Seq+ 12569 ChimerSeq FusionScan TCGA_RNA-Seq RSF1-PRRC2C RSF1 chr11 77396149 - PRRC2C chr1 171535371 + Exonic hg19 SARC TCGA-DX-A3U5 3 In-Frame Inter-chr q14.1 q24.3 Seq+ 12570 ChimerSeq FusionScan TCGA_RNA-Seq UHRF1BP1L-ZDHHC17 UHRF1BP1L chr12 100502163 - ZDHHC17 chr12 77191213 + Exonic hg19 SARC TCGA-DX-A3U5 2 In-Frame Intra-chr q23.1 q21.2 Seq+ 12571 ChimerSeq FusionScan TCGA_RNA-Seq LTA4H-BTBD11 LTA4H chr12 96396737 - BTBD11 chr12 107914263 + Exonic hg19 SARC TCGA-DX-A3U5 2 Out-of-Frame Intra-chr q23.1 q23.3 Seq+ 12572 ChimerSeq FusionScan TCGA_RNA-Seq TMTC2-LYZ TMTC2 chr12 83379825 + LYZ chr12 69743887 + Exonic hg19 SARC TCGA-DX-A3U5 2 Out-of-Frame Intra-chr q21.31 q15 Seq+ 12573 ChimerSeq FusionScan TCGA_RNA-Seq NTN4-RAP1B NTN4 chr12 96180716 - RAP1B chr12 69050085 + Exonic hg19 SARC TCGA-DX-A1L3 8 In-Frame Intra-chr q22 q15 12574 ChimerSeq FusionScan TCGA_RNA-Seq NTN4-RAP1B NTN4 chr12 96180716 - RAP1B chr12 69050880 + Exonic hg19 SARC TCGA-DX-A1L3 6 In-Frame Intra-chr q22 q15 12575 ChimerSeq FusionScan TCGA_RNA-Seq RNF138-RAP1B RNF138 chr18 29672849 + RAP1B chr12 69050085 + Exonic hg19 SARC TCGA-DX-A1L3 5 Out-of-Frame Inter-chr q12.1 q15 12576 ChimerSeq FusionScan TCGA_RNA-Seq C1orf9-CDH18 C1orf9 chr1 172502637 + CDH18 chr5 19981287 - Exonic hg19 SARC TCGA-DX-A1L3 4 CDS-5'UTR Inter-chr p14.3 Seq+ 12577 ChimerSeq FusionScan TCGA_RNA-Seq TRIO-TERT TRIO chr5 14420130 + TERT chr5 1282739 - Exonic hg19 SARC TCGA-DX-A1L3 4 In-Frame Intra-chr p15.2 p15.33 Oncogene Seq+ 12578 ChimerSeq FusionScan TCGA_RNA-Seq CNOT2-CRADD CNOT2 chr12 70637260 + CRADD chr12 94243745 + Exonic hg19 SARC TCGA-DX-A1L3 3 5'UTR-CDS Intra-chr q15 q22 Seq+ 12579 ChimerSeq FusionScan TCGA_RNA-Seq ATXN1-DNM3 ATXN1 chr6 16486202 - DNM3 chr1 172348157 + Exonic hg19 SARC TCGA-DX-A1L3 3 5'UTR-CDS Inter-chr p22.3 q24.3 Seq+ 12580 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-SCAPER CPSF6 chr12 69656342 + SCAPER chr15 76958130 - Exonic hg19 SARC TCGA-DX-A1L3 2 3'UTR-CDS Inter-chr q15 q24.3 12581 ChimerSeq FusionScan TCGA_RNA-Seq FBXL7-CCT5 FBXL7 chr5 15616181 + CCT5 chr5 10254256 + Exonic hg19 SARC TCGA-DX-A1L3 2 Out-of-Frame Intra-chr p15.1 p15.2 Seq+ 12582 ChimerSeq FusionScan TCGA_RNA-Seq USP8-TSPAN3 USP8 chr15 50763992 + TSPAN3 chr15 77348597 - Exonic hg19 SARC TCGA-DX-A6YZ 2 In-Frame Intra-chr q21.2 q24.3 Seq+ 12583 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57886156 + Exonic hg19 SKCM TCGA-ER-A19H 3 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 12584 ChimerSeq FusionScan TCGA_RNA-Seq NELL1-C11orf75 NELL1 chr11 20907086 + C11orf75 chr11 93232514 - Exonic hg19 SKCM TCGA-ER-A19H 2 CDS-5'UTR Intra-chr p15.1 Seq+ 12585 ChimerSeq FusionScan TCGA_RNA-Seq MAP4K4-IL1R1 MAP4K4 chr2 102493608 + IL1R1 chr2 102770401 + Exonic hg19 SKCM TCGA-WE-A8ZO 2 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 12586 ChimerSeq FusionScan TCGA_RNA-Seq CABIN1-GSTT2 CABIN1 chr22 24509715 + GSTT2 chr22 24302568 - Exonic hg19 SKCM TCGA-GN-A4U4 3 Out-of-Frame Intra-chr Seq+ 12587 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 SKCM TCGA-GN-A4U4 2 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 12588 ChimerSeq FusionScan TCGA_RNA-Seq CLIP1-RSRC2 CLIP1 chr12 122907067 - RSRC2 chr12 122992994 - Exonic hg19 SKCM TCGA-D3-A51H 3 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 12589 ChimerSeq FusionScan TCGA_RNA-Seq DNAJB14-C12orf33 DNAJB14 chr4 100824882 - C12orf33 chr12 9211472 - Exonic hg19 SKCM TCGA-D3-A51H 2 CDS-3'UTR Inter-chr q23 12590 ChimerSeq FusionScan TCGA_RNA-Seq TMEM117-KCNC2 TMEM117 chr12 44238731 + KCNC2 chr12 75445097 - Exonic hg19 SKCM TCGA-D3-A51H 2 Out-of-Frame Intra-chr q12 q21.1 Seq+ 12591 ChimerSeq FusionScan TCGA_RNA-Seq SPIN1-ARPC1B SPIN1 chr9 91003453 + ARPC1B chr7 98983324 + Exonic hg19 SKCM TCGA-D3-A2JL 2 5'UTR-5'UTR Inter-chr q22.1 q22.1 12592 ChimerSeq FusionScan TCGA_RNA-Seq C2orf74-GTF2IRD1 C2orf74 chr2 61372331 + GTF2IRD1 chr7 74016691 + Exonic hg19 SKCM TCGA-D3-A2JL 2 5'UTR-CDS Inter-chr p15 q11.23 Transcription factor 12593 ChimerSeq FusionScan TCGA_RNA-Seq GRB2-VMP1 GRB2 chr17 73389631 - VMP1 chr17 57842331 + Exonic hg19 SKCM TCGA-D9-A1JW 3 In-Frame Intra-chr q25.1 q23.1 Seq+ 12594 ChimerSeq FusionScan TCGA_RNA-Seq INPP4B-MFSD11 INPP4B chr4 143324090 - MFSD11 chr17 74763467 + Exonic hg19 SKCM TCGA-D3-A2J7 2 Out-of-Frame Inter-chr q31.21 Tumor suppressor gene q25.1 12595 ChimerSeq FusionScan TCGA_RNA-Seq RPS6-SRSF4 RPS6 chr9 19379484 - SRSF4 chr1 29481422 - Exonic hg19 SKCM TCGA-D3-A2J7 2 3'UTR-CDS Inter-chr p22.1 p35.3 12596 ChimerSeq FusionScan TCGA_RNA-Seq MLL-TMEM25 MLL chr11 118307659 + TMEM25 chr11 118416833 + Exonic hg19 SKCM TCGA-ER-A19G 3 Out-of-Frame Intra-chr q23.3 q23.3 12597 ChimerSeq FusionScan TCGA_RNA-Seq KPNA4-WWTR1 KPNA4 chr3 160233239 - WWTR1 chr3 149375096 - Exonic hg19 SKCM TCGA-D3-A2J8 7 CDS-5'UTR Intra-chr q25.33 q25.1 Seq+ 12598 ChimerSeq FusionScan TCGA_RNA-Seq FAM69A-SLC6A17 FAM69A chr1 93426932 - SLC6A17 chr1 110709464 + Exonic hg19 SKCM TCGA-W3-AA1O 2 CDS-5'UTR Intra-chr p22.1 p13.3 12599 ChimerSeq FusionScan TCGA_RNA-Seq RGPD5-MALL RGPD5 chr2 110552114 + MALL chr2 110849347 - Exonic hg19 SKCM TCGA-BF-A1PZ 2 In-Frame Intra-chr q13 q13 12600 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57990165 + VMP1 chr17 57915655 + Exonic hg19 SKCM TCGA-W3-AA21 2 Out-of-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 12601 ChimerSeq FusionScan TCGA_RNA-Seq BRAF-ATG7 BRAF chr7 140507759 - ATG7 chr3 11596284 + Exonic hg19 SKCM TCGA-BF-A5EP 4 In-Frame Inter-chr q34 TKL:RAF Oncogene p25.3 Seq+ 12602 ChimerSeq FusionScan TCGA_RNA-Seq HIBADH-BRAF HIBADH chr7 27668989 - BRAF chr7 140501360 - Exonic hg19 SKCM TCGA-BF-A5EP 2 Out-of-Frame Intra-chr p15.2 q34 TKL:RAF Oncogene Seq+ 12603 ChimerSeq FusionScan TCGA_RNA-Seq APC-NREP APC chr5 112043579 + NREP chr5 111071204 - Exonic hg19 SKCM TCGA-ER-A195 3 In-Frame Intra-chr q22.2 Oncogene Tumor suppressor gene q22.1 Seq+ 12604 ChimerSeq FusionScan TCGA_RNA-Seq TSC1-AK8 TSC1 chr9 135819929 - AK8 chr9 135668162 - Exonic hg19 SKCM TCGA-DA-A1I2 9 5'UTR-CDS Intra-chr q34.13 Oncogene Tumor suppressor gene q34.13 Seq+ 12605 ChimerSeq FusionScan TCGA_RNA-Seq TSC1-AK8 TSC1 chr9 135819929 - AK8 chr9 135602921 - Exonic hg19 SKCM TCGA-DA-A1I2 3 5'UTR-CDS Intra-chr q34.13 Oncogene Tumor suppressor gene q34.13 Seq+ 12606 ChimerSeq FusionScan TCGA_RNA-Seq ZDHHC17-GLIPR1L1 ZDHHC17 chr12 77158109 + GLIPR1L1 chr12 75756881 + Exonic hg19 SKCM TCGA-EE-A2MS 5 Out-of-Frame Intra-chr q21.2 q21.2 Seq+ 12607 ChimerSeq FusionScan TCGA_RNA-Seq LYST-NID1 LYST chr1 235950499 - NID1 chr1 236212289 - Exonic hg19 SKCM TCGA-EE-A2MS 3 Out-of-Frame Intra-chr q42.3 q42.3 Seq+ 12608 ChimerSeq FusionScan TCGA_RNA-Seq ERGIC1-GPR98 ERGIC1 chr5 172359539 + GPR98 chr5 90083887 + Exonic hg19 SKCM TCGA-EE-A2MS 2 In-Frame Intra-chr q35.1 Seq+ 12609 ChimerSeq FusionScan TCGA_RNA-Seq UBE2O-MXRA7 UBE2O chr17 74448806 - MXRA7 chr17 74684258 - Exonic hg19 SKCM TCGA-EE-A2MS 2 In-Frame Intra-chr q25.1 q25.1 Seq+ 12610 ChimerSeq FusionScan TCGA_RNA-Seq SH3KBP1-VSIG1 SH3KBP1 chrX 19854242 - VSIG1 chrX 107301267 + Exonic hg19 SKCM TCGA-EE-A2MS 2 Out-of-Frame Intra-chr p22.12 q22.3 Seq+ 12611 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 SKCM TCGA-EB-A4P0 2 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 12612 ChimerSeq FusionScan TCGA_RNA-Seq NR2C2-NTPCR NR2C2 chr3 14989413 + NTPCR chr1 233105654 + Exonic hg19 SKCM TCGA-ER-A2NG 2 5'UTR-CDS Inter-chr p25.1 Tumor suppressor gene Transcription factor q42.2 12613 ChimerSeq FusionScan TCGA_RNA-Seq RPAP1-SYTL1 RPAP1 chr15 41836416 - SYTL1 chr1 27673911 + Exonic hg19 SKCM TCGA-RP-A695 6 5'UTR-CDS Inter-chr q15.1 p36.11 Seq+ 12614 ChimerSeq FusionScan TCGA_RNA-Seq MLLT10-SLC16A1 MLLT10 chr10 21823733 + SLC16A1 chr1 113471974 - Exonic hg19 SKCM TCGA-RP-A695 2 CDS-5'UTR Inter-chr p12.31 Oncogene Seq+ 12615 ChimerSeq FusionScan TCGA_RNA-Seq MRS2-C6orf62 MRS2 chr6 24423278 + C6orf62 chr6 24709139 - Exonic hg19 SKCM TCGA-EE-A2GP 4 In-Frame Intra-chr p22.3 p22.3 Seq+ 12616 ChimerSeq FusionScan TCGA_RNA-Seq C6orf62-MRS2 C6orf62 chr6 24714545 - MRS2 chr6 24423811 + Exonic hg19 SKCM TCGA-EE-A2GP 4 In-Frame Intra-chr p22.3 p22.3 Seq+ 12617 ChimerSeq FusionScan TCGA_RNA-Seq ATP1A1-ATG4C ATP1A1 chr1 116916145 + ATG4C chr1 63329662 + Exonic hg19 SKCM TCGA-EE-A2GP 3 In-Frame Intra-chr p13.1 p31.3 Seq+ 12618 ChimerSeq FusionScan TCGA_RNA-Seq USP39-REEP1 USP39 chr2 85846412 + REEP1 chr2 86509365 - Exonic hg19 SKCM TCGA-EE-A2GP 2 In-Frame Intra-chr p11.2 p11.2 Seq+ 12619 ChimerSeq FusionScan TCGA_RNA-Seq TTYH3-MAD1L1 TTYH3 chr7 2671912 + MAD1L1 chr7 1855864 - Exonic hg19 SKCM TCGA-BF-A3DL 2 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 12620 ChimerSeq FusionScan TCGA_RNA-Seq TTYH3-ASPSCR1 TTYH3 chr7 2671912 + ASPSCR1 chr17 79966912 + Exonic hg19 SKCM TCGA-BF-A3DL 2 In-Frame Inter-chr p22.3 q25.3 Seq+ 12621 ChimerSeq FusionScan TCGA_RNA-Seq ERC1-METTL4 ERC1 chr12 1346070 + METTL4 chr18 2567653 - Exonic hg19 SKCM TCGA-D3-A1Q9 7 5'UTR-5'UTR Inter-chr p11.32 Seq+ 12622 ChimerSeq FusionScan TCGA_RNA-Seq RBM39-EDEM2 RBM39 chr20 34326889 - EDEM2 chr20 33719586 - Exonic hg19 SKCM TCGA-D3-A1Q9 3 Out-of-Frame Intra-chr q11.22 q11.22 Seq+ 12623 ChimerSeq FusionScan TCGA_RNA-Seq NFATC3-CDH1 NFATC3 chr16 68119687 + CDH1 chr16 68835572 + Exonic hg19 SKCM TCGA-FS-A1ZQ 2 In-Frame Intra-chr q22.1 Transcription factor q22.1 Oncogene Tumor suppressor gene 12624 ChimerSeq FusionScan TCGA_RNA-Seq MTSS1-WHSC1L1 MTSS1 chr8 125711766 - WHSC1L1 chr8 38205733 - Exonic hg19 SKCM TCGA-GF-A769 5 CDS-5'UTR Intra-chr q24.13 Tumor suppressor gene p11.23 Tumor suppressor gene Seq+ 12625 ChimerSeq FusionScan TCGA_RNA-Seq ZMAT3-TP63 ZMAT3 chr3 178785270 - TP63 chr3 189455528 + Exonic hg19 SKCM TCGA-GF-A769 2 Out-of-Frame Intra-chr q26.32 q28 Tumor suppressor gene Transcription factor Seq+ 12626 ChimerSeq FusionScan TCGA_RNA-Seq MGAT4B-ETF1 MGAT4B chr5 179233486 - ETF1 chr5 137854556 - Exonic hg19 SKCM TCGA-EE-A2M7 4 Out-of-Frame Intra-chr q31.2 Seq+ 12627 ChimerSeq FusionScan TCGA_RNA-Seq RAC1-CCZ1 RAC1 chr7 6431672 + CCZ1 chr7 5963017 + Exonic hg19 SKCM TCGA-EE-A2M7 3 Out-of-Frame Intra-chr p22.1 Oncogene p22.1 12628 ChimerSeq FusionScan TCGA_RNA-Seq RAC1-CCZ1B RAC1 chr7 6431672 + CCZ1B chr7 6841154 - Exonic hg19 SKCM TCGA-EE-A2M7 3 Out-of-Frame Intra-chr p22.1 Oncogene p22.1 12629 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-AKR1E2 CPSF6 chr12 69656342 + AKR1E2 chr10 4872866 + Exonic hg19 SKCM TCGA-EE-A2M7 2 3'UTR-CDS Inter-chr q15 p15.1 12630 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 SKCM TCGA-WE-A8ZY 2 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 12631 ChimerSeq FusionScan TCGA_RNA-Seq VPS8-OLA1 VPS8 chr3 184530013 + OLA1 chr2 175006728 - Exonic hg19 SKCM TCGA-EE-A2M6 3 5'UTR-5'UTR Inter-chr q27.2 q31.1 12632 ChimerSeq FusionScan TCGA_RNA-Seq GAB2-CERS6 GAB2 chr11 78128691 - CERS6 chr2 169547543 + Exonic hg19 SKCM TCGA-EE-A2M6 2 In-Frame Inter-chr q14.1 q24.3 12633 ChimerSeq FusionScan TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12022903 + NTRK3 chr15 88483984 - Exonic hg19 SKCM TCGA-EB-A51B 2 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 12634 ChimerSeq FusionScan TCGA_RNA-Seq STIM1-PNPLA2 STIM1 chr11 3877639 + PNPLA2 chr11 821627 + Exonic hg19 SKCM TCGA-GN-A8LK 2 In-Frame Intra-chr p15.4 p15.5 Seq+ 12635 ChimerSeq FusionScan TCGA_RNA-Seq CLCN6-RAF1 CLCN6 chr1 11867247 + RAF1 chr3 12641914 - Exonic hg19 SKCM TCGA-ER-A19L 5 In-Frame Inter-chr p36.22 p25.2 TKL:RAF Oncogene Seq+ 12636 ChimerSeq FusionScan TCGA_RNA-Seq ELP2-DDX39B ELP2 chr18 33721164 + DDX39B chr6 31500688 - Exonic hg19 SKCM TCGA-ER-A19O 2 5'UTR-5'UTR Inter-chr q12.2 12637 ChimerSeq FusionScan TCGA_RNA-Seq SFXN4-SIRT3 SFXN4 chr10 120925048 - SIRT3 chr11 224239 - Exonic hg19 SKCM TCGA-GN-A26C 2 In-Frame Inter-chr q26.11 p15.5 Tumor suppressor gene 12638 ChimerSeq FusionScan TCGA_RNA-Seq IKZF2-TBC1D7 IKZF2 chr2 214016136 - TBC1D7 chr6 13321327 - Exonic hg19 SKCM TCGA-GN-A26C 2 5'UTR-CDS Inter-chr q34 Tumor suppressor gene Transcription factor p24.1 12639 ChimerSeq FusionScan TCGA_RNA-Seq MYO10-C5orf38 MYO10 chr5 16877717 - C5orf38 chr5 2755142 + Exonic hg19 SKCM TCGA-D3-A2JC 10 Out-of-Frame Intra-chr p15.1 p15.33 Seq+ 12640 ChimerSeq FusionScan TCGA_RNA-Seq TAX1BP1-BRAF TAX1BP1 chr7 27827222 + BRAF chr7 140481493 - Exonic hg19 SKCM TCGA-D3-A2JC 3 In-Frame Intra-chr p15.2 q34 TKL:RAF Oncogene Seq+ 12641 ChimerSeq FusionScan TCGA_RNA-Seq TRMU-ST13 TRMU chr22 46749764 + ST13 chr22 41231891 - Exonic hg19 SKCM TCGA-D3-A2JC 2 Out-of-Frame Intra-chr q13.31 q13.2 Tumor suppressor gene Seq+ 12642 ChimerSeq FusionScan TCGA_RNA-Seq TRIP12-MAFF TRIP12 chr2 230786595 - MAFF chr22 38609829 + Exonic hg19 SKCM TCGA-D3-A2JC 2 5'UTR-5'UTR Inter-chr q36.3 q13.1 Transcription factor Seq+ 12643 ChimerSeq FusionScan TCGA_RNA-Seq CLINT1-UCHL3 CLINT1 chr5 157285937 - UCHL3 chr13 76134888 + Exonic hg19 SKCM TCGA-Z2-A8RT 3 Out-of-Frame Inter-chr q33.3 q22.2 Seq+ 12644 ChimerSeq FusionScan TCGA_RNA-Seq MRPS15-HAT1 MRPS15 chr1 36926292 - HAT1 chr2 172782046 + Exonic hg19 SKCM TCGA-D3-A1Q8 2 In-Frame Inter-chr p34.3 q31.1 12645 ChimerSeq FusionScan TCGA_RNA-Seq COMT-ZDHHC8 COMT chr22 19929420 + ZDHHC8 chr22 20126716 + Exonic hg19 SKCM TCGA-EB-A5KH 3 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 12646 ChimerSeq FusionScan TCGA_RNA-Seq COMT-ZDHHC8 COMT chr22 19939177 + ZDHHC8 chr22 20126716 + Exonic hg19 SKCM TCGA-EB-A5KH 3 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 12647 ChimerSeq FusionScan TCGA_RNA-Seq SPECC1L-MED15 SPECC1L chr22 24808675 + MED15 chr22 20905722 + Exonic hg19 SKCM TCGA-EB-A5KH 3 In-Frame Intra-chr q11.23 q11.21 Seq+ 12648 ChimerSeq FusionScan TCGA_RNA-Seq RBFOX2-MED15 RBFOX2 chr22 36424287 - MED15 chr22 20905722 + Exonic hg19 SKCM TCGA-EB-A5KH 2 In-Frame Intra-chr q11.21 Seq+ 12649 ChimerSeq FusionScan TCGA_RNA-Seq SEMA5A-RBFOX2 SEMA5A chr5 9545695 - RBFOX2 chr22 36157515 - Exonic hg19 SKCM TCGA-EB-A5KH 2 5'UTR-CDS Inter-chr p15.31 Seq+ 12650 ChimerSeq FusionScan TCGA_RNA-Seq DPYSL3-IL17B DPYSL3 chr5 146889040 - IL17B chr5 148756588 - Exonic hg19 SKCM TCGA-EB-A5KH 2 In-Frame Intra-chr q32 q32 Seq+ 12651 ChimerSeq FusionScan TCGA_RNA-Seq HMGA2-GNS HMGA2 chr12 66232349 + GNS chr12 65146537 - Exonic hg19 SKCM TCGA-EB-A3HV 3 In-Frame Intra-chr q14.3 Transcription factor q14.3 Seq+ 12652 ChimerSeq FusionScan TCGA_RNA-Seq POGZ-HHIPL2 POGZ chr1 151381169 - HHIPL2 chr1 222712116 - Exonic hg19 SKCM TCGA-GN-A26A 5 Out-of-Frame Intra-chr q21.3 q41 Seq+ 12653 ChimerSeq FusionScan TCGA_RNA-Seq MEF2A-WDR61 MEF2A chr15 100106309 + WDR61 chr15 78588067 - Exonic hg19 SKCM TCGA-GN-A26A 3 5'UTR-5'UTR Intra-chr q26.3 Transcription factor q25.1 Seq+ 12654 ChimerSeq FusionScan TCGA_RNA-Seq ARFGAP3-FBLN1 ARFGAP3 chr22 43253119 - FBLN1 chr22 45996186 + Exonic hg19 SKCM TCGA-FS-A4F4 4 Out-of-Frame Intra-chr q13.2 q13.31 Tumor suppressor gene Seq+ 12655 ChimerSeq FusionScan TCGA_RNA-Seq ADCY2-CLPTM1L ADCY2 chr5 7789913 + CLPTM1L chr5 1320846 - Exonic hg19 SKCM TCGA-FS-A4F4 4 In-Frame Intra-chr p15.31 p15.33 Seq+ 12656 ChimerSeq FusionScan TCGA_RNA-Seq PACSIN2-RAI14 PACSIN2 chr22 43411026 - RAI14 chr5 34686976 + Exonic hg19 SKCM TCGA-FS-A4F4 3 5'UTR-5'UTR Inter-chr q13.2 p13.2 Seq+ 12657 ChimerSeq FusionScan TCGA_RNA-Seq ADRBK2-EP300 ADRBK2 chr22 25961120 + EP300 chr22 41550998 + Exonic hg19 SKCM TCGA-FS-A4F4 3 Out-of-Frame Intra-chr q13.2 Oncogene Seq+ 12658 ChimerSeq FusionScan TCGA_RNA-Seq EP300-FBLN1 EP300 chr22 41551117 + FBLN1 chr22 45996186 + Exonic hg19 SKCM TCGA-FS-A4F4 3 Out-of-Frame Intra-chr q13.2 Oncogene q13.31 Tumor suppressor gene Seq+ 12659 ChimerSeq FusionScan TCGA_RNA-Seq TSPO-LZTR1 TSPO chr22 43547610 + LZTR1 chr22 21341792 + Exonic hg19 SKCM TCGA-FS-A4F4 3 5'UTR-CDS Intra-chr q13.2 q11.21 Seq+ 12660 ChimerSeq FusionScan TCGA_RNA-Seq TSPO-CDH18 TSPO chr22 43557196 + CDH18 chr5 19981287 - Exonic hg19 SKCM TCGA-FS-A4F4 2 5'UTR-5'UTR Inter-chr q13.2 p14.3 Seq+ 12661 ChimerSeq FusionScan TCGA_RNA-Seq TSPO-LZTR1 TSPO chr22 43547610 + LZTR1 chr22 21342298 + Exonic hg19 SKCM TCGA-FS-A4F4 2 5'UTR-CDS Intra-chr q13.2 q11.21 Seq+ 12662 ChimerSeq FusionScan TCGA_RNA-Seq NAV2-ERC1 NAV2 chr11 19914140 + ERC1 chr12 1599258 + Exonic hg19 SKCM TCGA-FS-A4F4 2 Out-of-Frame Inter-chr p15.1 Seq+ 12663 ChimerSeq FusionScan TCGA_RNA-Seq FAM109B-RAI14 FAM109B chr22 42471656 + RAI14 chr5 34686976 + Exonic hg19 SKCM TCGA-FS-A4F4 2 5'UTR-5'UTR Inter-chr q13.2 p13.2 Seq+ 12664 ChimerSeq FusionScan TCGA_RNA-Seq RAI14-CYB5R3 RAI14 chr5 34687060 + CYB5R3 chr22 43015951 - Exonic hg19 SKCM TCGA-FS-A4F4 2 Out-of-Frame Inter-chr p13.2 q13.2 Seq+ 12665 ChimerSeq FusionScan TCGA_RNA-Seq ZC3H7B-GRAMD4 ZC3H7B chr22 41697776 + GRAMD4 chr22 47063992 + Exonic hg19 SKCM TCGA-FS-A4F4 2 5'UTR-CDS Intra-chr q13.2 q13.31 Seq+ 12666 ChimerSeq FusionScan TCGA_RNA-Seq PLA2G6-TMEM184B PLA2G6 chr22 38577790 - TMEM184B chr22 38627340 - Exonic hg19 SKCM TCGA-FS-A4F4 2 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 12667 ChimerSeq FusionScan TCGA_RNA-Seq SLC3A2-GRAP2 SLC3A2 chr11 62653080 + GRAP2 chr22 40365414 + Exonic hg19 SKCM TCGA-FS-A1ZK 5 In-Frame Inter-chr q12.3 q13.1 Seq+ 12668 ChimerSeq FusionScan TCGA_RNA-Seq SBF1-ODZ4 SBF1 chr22 50905766 - ODZ4 chr11 78468066 - Exonic hg19 SKCM TCGA-FS-A1ZK 3 Out-of-Frame Inter-chr q13.33 Seq+ 12669 ChimerSeq FusionScan TCGA_RNA-Seq RBFOX2-MKL1 RBFOX2 chr22 36155934 - MKL1 chr22 40859290 - Exonic hg19 SKCM TCGA-FS-A1ZK 2 CDS-5'UTR Intra-chr q13.2 Seq+ 12670 ChimerSeq FusionScan TCGA_RNA-Seq DGCR2-GNB1L DGCR2 chr22 19052360 - GNB1L chr22 19776483 - Exonic hg19 SKCM TCGA-FS-A1ZK 2 Out-of-Frame Intra-chr q11.21 q11.21 Seq+ 12671 ChimerSeq FusionScan TCGA_RNA-Seq SUN1-ABHD16A SUN1 chr7 856310 + ABHD16A chr6 31659695 - Exonic hg19 SKCM TCGA-FS-A1ZK 2 5'UTR-5'UTR Inter-chr p22.3 Seq+ 12672 ChimerSeq FusionScan TCGA_RNA-Seq SIPA1L3-CEP89 SIPA1L3 chr19 38682950 + CEP89 chr19 33372919 - Exonic hg19 SKCM TCGA-FS-A1ZK 2 In-Frame Intra-chr q13.13 q13.11 Seq+ 12673 ChimerSeq FusionScan TCGA_RNA-Seq RNF157-CA10 RNF157 chr17 74236233 - CA10 chr17 49711011 - Exonic hg19 SKCM TCGA-FS-A1ZK 2 Out-of-Frame Intra-chr q25.1 q22 Seq+ 12674 ChimerSeq FusionScan TCGA_RNA-Seq SMARCD2-NUFIP2 SMARCD2 chr17 61912064 - NUFIP2 chr17 27594548 - Exonic hg19 SKCM TCGA-FS-A1ZK 2 Out-of-Frame Intra-chr q23.3 q11.2 Seq+ 12675 ChimerSeq FusionScan TCGA_RNA-Seq FGFR1OP-ABCC4 FGFR1OP chr6 167417299 + ABCC4 chr13 95847191 - Exonic hg19 SKCM TCGA-EB-A431 2 In-Frame Inter-chr q27 q32.1 Seq+ 12676 ChimerSeq FusionScan TCGA_RNA-Seq GNG7-PLA2G2A GNG7 chr19 2646221 - PLA2G2A chr1 20305372 - Exonic hg19 SKCM TCGA-EB-A42Z 2 5'UTR-5'UTR Inter-chr p13.3 p36.13 Tumor suppressor gene Seq+ 12677 ChimerSeq FusionScan TCGA_RNA-Seq DHX9-ZBTB37 DHX9 chr1 182829319 + ZBTB37 chr1 173839334 + Exonic hg19 SKCM TCGA-EB-A42Z 2 5'UTR-5'UTR Intra-chr q25.3 q25.1 Transcription factor Seq+ 12678 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-PHTF2 PTPN12 chr7 77221573 + PHTF2 chr7 77469537 + Exonic hg19 SKCM TCGA-EB-A42Z 2 CDS-5'UTR Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 12679 ChimerSeq FusionScan TCGA_RNA-Seq ZNF786-FAM116B ZNF786 chr7 148771477 - FAM116B chr22 50757432 - Exonic hg19 SKCM TCGA-EB-A551 2 Out-of-Frame Inter-chr q36.1 Transcription factor Seq+ 12680 ChimerSeq FusionScan TCGA_RNA-Seq LRRFIP2-DEPTOR LRRFIP2 chr3 37216029 - DEPTOR chr8 121061814 + Exonic hg19 SKCM TCGA-EE-A29V 5 5'UTR-CDS Inter-chr p22.2 q24.12 Seq+ 12681 ChimerSeq FusionScan TCGA_RNA-Seq MRPL52-C14orf93 MRPL52 chr14 23299463 + C14orf93 chr14 23468365 - Exonic hg19 SKCM TCGA-EE-A29V 3 5'UTR-5'UTR Intra-chr q11.2 q11.2 Seq+ 12682 ChimerSeq FusionScan TCGA_RNA-Seq RPTOR-RAB34 RPTOR chr17 78519591 + RAB34 chr17 27042919 - Exonic hg19 SKCM TCGA-EE-A29V 2 Out-of-Frame Intra-chr q25.3 q11.2 Seq+ 12683 ChimerSeq FusionScan TCGA_RNA-Seq TSPAN9-KLRG1 TSPAN9 chr12 3192885 + KLRG1 chr12 9161570 + Exonic hg19 SKCM TCGA-EE-A29V 2 5'UTR-CDS Intra-chr p13.33 p13.31 Seq+ 12684 ChimerSeq FusionScan TCGA_RNA-Seq CSK-C15orf27 CSK chr15 75075061 + C15orf27 chr15 76426508 + Exonic hg19 SKCM TCGA-EE-A2MR 4 5'UTR-5'UTR Intra-chr q24.1 TK:Csk Seq+ 12685 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 SKCM TCGA-EE-A2MR 2 Out-of-Frame Intra-chr q22.2 q22.2 12686 ChimerSeq FusionScan TCGA_RNA-Seq FAM168A-RNF121 FAM168A chr11 73308967 - RNF121 chr11 71668272 + Exonic hg19 SKCM TCGA-ER-A19T 5 5'UTR-CDS Intra-chr q13.4 q13.4 Seq+ 12687 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-TPCN2 PVT1 chr8 128806980 + TPCN2 chr11 68825045 + Exonic hg19 SKCM TCGA-ER-A19T 4 5'UTR-CDS Inter-chr q24.21 q13.3 Seq+ 12688 ChimerSeq FusionScan TCGA_RNA-Seq MKLN1-NRF1 MKLN1 chr7 131122756 + NRF1 chr7 129367080 + Exonic hg19 SKCM TCGA-ER-A19T 2 Out-of-Frame Intra-chr q32.3 q32.2 Tumor suppressor gene Transcription factor Seq+ 12689 ChimerSeq FusionScan TCGA_RNA-Seq TUBB4B-TCEA2 TUBB4B chr9 140135869 + TCEA2 chr20 62697828 + Exonic hg19 SKCM TCGA-ER-A19T 2 In-Frame Inter-chr q34.3 q13.33 12690 ChimerSeq FusionScan TCGA_RNA-Seq TRIM2-LRBA TRIM2 chr4 154074422 + LRBA chr4 151738409 - Exonic hg19 SKCM TCGA-FW-A3R5 2 5'UTR-CDS Intra-chr q31.3 q31.3 Seq+ 12691 ChimerSeq FusionScan TCGA_RNA-Seq CYP7B1-SULF1 CYP7B1 chr8 65711022 - SULF1 chr8 70475773 + Exonic hg19 SKCM TCGA-WE-AAA3 2 CDS-5'UTR Intra-chr q12.3 q13.2 Seq+ 12692 ChimerSeq FusionScan TCGA_RNA-Seq PAPSS2-PTEN PAPSS2 chr10 89419765 + PTEN chr10 89685269 + Exonic hg19 SKCM TCGA-EB-A85I 2 Out-of-Frame Intra-chr q23.2 q23.31 Oncogene Tumor suppressor gene Seq+ 12693 ChimerSeq FusionScan TCGA_RNA-Seq PTBP3-SVEP1 PTBP3 chr9 115095749 - SVEP1 chr9 113141797 - Exonic hg19 SKCM TCGA-EB-A82C 6 Out-of-Frame Intra-chr q32 q31.3 Seq+ 12694 ChimerSeq FusionScan TCGA_RNA-Seq USP47-RRAS2 USP47 chr11 11863771 + RRAS2 chr11 14317401 - Exonic hg19 SKCM TCGA-EB-A82C 5 In-Frame Intra-chr p15.3 p15.2 Seq+ 12695 ChimerSeq FusionScan TCGA_RNA-Seq ABI1-CUBN ABI1 chr10 27149675 - CUBN chr10 17032514 - Exonic hg19 SKCM TCGA-EB-A82C 2 CDS-5'UTR Intra-chr p12.1 p13 Seq+ 12696 ChimerSeq FusionScan TCGA_RNA-Seq PNPLA6-ATP13A1 PNPLA6 chr19 7607970 + ATP13A1 chr19 19756341 - Exonic hg19 SKCM TCGA-EE-A2MG 4 In-Frame Intra-chr p13.2 p13.11 Seq+ 12697 ChimerSeq FusionScan TCGA_RNA-Seq BRAF-AGK BRAF chr7 140500161 - AGK chr7 141292945 + Exonic hg19 SKCM TCGA-DA-A1IA 2 In-Frame Intra-chr q34 TKL:RAF Oncogene Seq+ 12698 ChimerSeq FusionScan TCGA_RNA-Seq SHC1-COL6A2 SHC1 chr1 154940146 - COL6A2 chr21 47549109 + Exonic hg19 SKCM TCGA-EE-A2GE 2 Out-of-Frame Inter-chr q21.3 q22.3 Seq+ 12699 ChimerSeq FusionScan TCGA_RNA-Seq FAM59A-PTPRM FAM59A chr18 29972857 - PTPRM chr18 7888103 + Exonic hg19 SKCM TCGA-EE-A2GB 3 In-Frame Intra-chr p11.23 Seq+ 12700 ChimerSeq FusionScan TCGA_RNA-Seq RASSF8-SSPN RASSF8 chr12 26208379 + SSPN chr12 26377225 + Exonic hg19 SKCM TCGA-EE-A2GB 2 Out-of-Frame Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 12701 ChimerSeq FusionScan TCGA_RNA-Seq METTL21B-PIP4K2C METTL21B chr12 58166911 + PIP4K2C chr12 57987807 + Exonic hg19 SKCM TCGA-EE-A2GB 2 Out-of-Frame Intra-chr q13.3 Seq+ 12702 ChimerSeq FusionScan TCGA_RNA-Seq SEMA3E-CEP41 SEMA3E chr7 83277743 - CEP41 chr7 130056807 - Exonic hg19 SKCM TCGA-FS-A1ZB 4 In-Frame Intra-chr q21.11 q32.2 Seq+ 12703 ChimerSeq FusionScan TCGA_RNA-Seq SPTBN1-FUS SPTBN1 chr2 54753703 + FUS chr16 31199645 + Exonic hg19 SKCM TCGA-FS-A1ZB 2 In-Frame Inter-chr p16.2 Tumor suppressor gene p11.2 Tumor suppressor gene 12704 ChimerSeq FusionScan TCGA_RNA-Seq NAV2-TARBP2 NAV2 chr11 20119291 + TARBP2 chr12 53898180 + Exonic hg19 SKCM TCGA-D3-A3C3 2 Out-of-Frame Inter-chr p15.1 q13.13 12705 ChimerSeq FusionScan TCGA_RNA-Seq GNA12-TTYH3 GNA12 chr7 2834561 - TTYH3 chr7 2686486 + Exonic hg19 SKCM TCGA-D3-A3C3 2 In-Frame Intra-chr p22.2 p22.3 12706 ChimerSeq FusionScan TCGA_RNA-Seq RBX1-ZNF442 RBX1 chr22 41363888 + ZNF442 chr19 12463928 - Exonic hg19 SKCM TCGA-EE-A29M 2 Out-of-Frame Inter-chr q13.2 p13.2 Transcription factor Seq+ 12707 ChimerSeq FusionScan TCGA_RNA-Seq OXCT1-PRKAA1 OXCT1 chr5 41794104 - PRKAA1 chr5 40777688 - Exonic hg19 SKCM TCGA-EB-A44Q 4 Out-of-Frame Intra-chr p13.1 p13.1 Tumor suppressor gene Seq+ 12708 ChimerSeq FusionScan TCGA_RNA-Seq TRIO-ADAMTS12 TRIO chr5 14381361 + ADAMTS12 chr5 33881585 - Exonic hg19 SKCM TCGA-EB-A44Q 4 Out-of-Frame Intra-chr p15.2 p13.2 Seq+ 12709 ChimerSeq FusionScan TCGA_RNA-Seq CNOT2-FBXO4 CNOT2 chr12 70637260 + FBXO4 chr5 41929798 + Exonic hg19 SKCM TCGA-EB-A44Q 3 5'UTR-CDS Inter-chr q15 p13.1 Seq+ 12710 ChimerSeq FusionScan TCGA_RNA-Seq R3HDM2-LRP1 R3HDM2 chr12 57696958 - LRP1 chr12 57577557 + Exonic hg19 SKCM TCGA-EB-A44Q 2 Out-of-Frame Intra-chr q13.3 q13.3 Seq+ 12711 ChimerSeq FusionScan TCGA_RNA-Seq CNOT2-FBXO4 CNOT2 chr12 70637260 + FBXO4 chr5 41927114 + Exonic hg19 SKCM TCGA-EB-A44Q 2 5'UTR-CDS Inter-chr q15 p13.1 Seq+ 12712 ChimerSeq FusionScan TCGA_RNA-Seq R3HDM2-LRP1 R3HDM2 chr12 57696958 - LRP1 chr12 57577161 + Exonic hg19 SKCM TCGA-EB-A44Q 2 Out-of-Frame Intra-chr q13.3 q13.3 Seq+ 12713 ChimerSeq FusionScan TCGA_RNA-Seq SON-ITSN1 SON chr21 34948199 + ITSN1 chr21 35153764 + Exonic hg19 SKCM TCGA-DA-A1I7 2 In-Frame Intra-chr q22.11 Transcription factor q22.11 Seq+ 12714 ChimerSeq FusionScan TCGA_RNA-Seq TTYH3-MAD1L1 TTYH3 chr7 2671912 + MAD1L1 chr7 1855864 - Exonic hg19 SKCM TCGA-Z2-AA3V 5 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 12715 ChimerSeq FusionScan TCGA_RNA-Seq TTYH3-ASPSCR1 TTYH3 chr7 2671912 + ASPSCR1 chr17 79966912 + Exonic hg19 SKCM TCGA-Z2-AA3V 3 In-Frame Inter-chr p22.3 q25.3 Seq+ 12716 ChimerSeq FusionScan TCGA_RNA-Seq TTYH3-MAD1L1 TTYH3 chr7 2671912 + MAD1L1 chr7 1938026 - Exonic hg19 SKCM TCGA-Z2-AA3V 3 Out-of-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 12717 ChimerSeq FusionScan TCGA_RNA-Seq GPR155-CIR1 GPR155 chr2 175304625 - CIR1 chr2 175252507 - Exonic hg19 SKCM TCGA-HR-A2OG 2 Out-of-Frame Intra-chr q31.1 q31.1 12718 ChimerSeq FusionScan TCGA_RNA-Seq RNF213-TBCD RNF213 chr17 78237577 + TBCD chr17 80828099 + Exonic hg19 SKCM TCGA-XV-AAZV 2 In-Frame Intra-chr q25.3 Oncogene Seq+ 12719 ChimerSeq FusionScan TCGA_RNA-Seq ZNF544-GRIN2D ZNF544 chr19 58741828 + GRIN2D chr19 48907990 + Exonic hg19 SKCM TCGA-D3-A2JE 2 5'UTR-CDS Intra-chr q13.43 Transcription factor q13.33 Seq+ 12720 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0146-UBE2V2 KIAA0146 chr8 48626203 + UBE2V2 chr8 48955592 + Exonic hg19 SKCM TCGA-D3-A2JE 2 In-Frame Intra-chr q11.21 Seq+ 12721 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 SKCM TCGA-ER-A1A1 2 Out-of-Frame Intra-chr q22.2 q22.2 12722 ChimerSeq FusionScan TCGA_RNA-Seq TFCP2-TGIF2 TFCP2 chr12 51566083 - TGIF2 chr20 35207143 + Exonic hg19 SKCM TCGA-ER-A1A1 2 CDS-5'UTR Inter-chr q13.13 Transcription factor q11.23 Transcription factor 12723 ChimerSeq FusionScan TCGA_RNA-Seq SOLH-DDX5 SOLH chr16 583998 + DDX5 chr17 62500960 - Exonic hg19 STAD TCGA-BR-7722 2 5'UTR-CDS Inter-chr q23.3 12724 ChimerSeq FusionScan TCGA_RNA-Seq INTS10-NUDCD2 INTS10 chr8 19675177 + NUDCD2 chr5 162884616 - Exonic hg19 STAD TCGA-BR-7722 2 In-Frame Inter-chr p21.3 q34 12725 ChimerSeq FusionScan TCGA_RNA-Seq UBAP2-C9orf16 UBAP2 chr9 33996220 - C9orf16 chr9 130925721 + Exonic hg19 STAD TCGA-IN-8663 2 Out-of-Frame Intra-chr p13.3 q34.11 12726 ChimerSeq FusionScan TCGA_RNA-Seq MYO18A-LRP12 MYO18A chr17 27434097 - LRP12 chr8 105544191 - Exonic hg19 STAD TCGA-IN-8663 2 Out-of-Frame Inter-chr q11.2 Oncogene q22.3 12727 ChimerSeq FusionScan TCGA_RNA-Seq MGLL-MICU1 MGLL chr3 127429418 - MICU1 chr10 74237014 - Exonic hg19 STAD TCGA-IN-8663 2 Out-of-Frame Inter-chr q21.3 q22.1 12728 ChimerSeq FusionScan TCGA_RNA-Seq CASC1-LYRM5 CASC1 chr12 25348009 - LYRM5 chr12 25356853 + Exonic hg19 STAD TCGA-IN-8663 2 5'UTR-5'UTR Intra-chr p12.1 Tumor suppressor gene Seq+ 12729 ChimerSeq FusionScan TCGA_RNA-Seq NUMB-PSEN1 NUMB chr14 73925198 - PSEN1 chr14 73614502 + Exonic hg19 STAD TCGA-IN-8663 2 5'UTR-5'UTR Intra-chr q24.3 Tumor suppressor gene q24.2 12730 ChimerSeq FusionScan TCGA_RNA-Seq SET-PPIB SET chr9 131456321 + PPIB chr15 64449108 - Exonic hg19 STAD TCGA-IN-8663 2 Out-of-Frame Inter-chr q34.11 q22.31 12731 ChimerSeq FusionScan TCGA_RNA-Seq MCFD2-SERPINB5 MCFD2 chr2 47134948 - SERPINB5 chr18 61170562 + Exonic hg19 STAD TCGA-IN-8663 2 In-Frame Inter-chr p21 q21.33 Tumor suppressor gene 12732 ChimerSeq FusionScan TCGA_RNA-Seq GOLGA4-UBP1 GOLGA4 chr3 37285113 + UBP1 chr3 33467233 - Exonic hg19 STAD TCGA-IN-8663 2 Out-of-Frame Intra-chr p22.2 p22.3 Transcription factor 12733 ChimerSeq FusionScan TCGA_RNA-Seq RNF121-C6orf132 RNF121 chr11 71671937 + C6orf132 chr6 42078029 - Exonic hg19 STAD TCGA-IN-8663 2 In-Frame Inter-chr q13.4 p21.1 12734 ChimerSeq FusionScan TCGA_RNA-Seq KRT19-JUP KRT19 chr17 39684079 - JUP chr17 39912466 - Exonic hg19 STAD TCGA-IN-8663 2 In-Frame Intra-chr q21.2 Tumor suppressor gene q21.2 Tumor suppressor gene 12735 ChimerSeq FusionScan TCGA_RNA-Seq SMARCA4-CARM1 SMARCA4 chr19 11100119 + CARM1 chr19 11022859 + Exonic hg19 STAD TCGA-VQ-A91K 17 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 12736 ChimerSeq FusionScan TCGA_RNA-Seq TMEM59-SSBP3 TMEM59 chr1 54502282 - SSBP3 chr1 54722859 - Exonic hg19 STAD TCGA-VQ-A91K 11 In-Frame Intra-chr p32.3 p32.3 Seq+ 12737 ChimerSeq FusionScan TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104722244 + LHFPL3 chr7 104377121 + Exonic hg19 STAD TCGA-VQ-A91K 7 Out-of-Frame Intra-chr q22.2 Seq+ 12738 ChimerSeq FusionScan TCGA_RNA-Seq VSIG1-MID2 VSIG1 chrX 107301431 + MID2 chrX 107159231 + Exonic hg19 STAD TCGA-VQ-A91K 7 Out-of-Frame Intra-chr q22.3 q22.3 Seq+ 12739 ChimerSeq FusionScan TCGA_RNA-Seq CASP10-CFLAR CASP10 chr2 202052522 + CFLAR chr2 202010100 + Exonic hg19 STAD TCGA-VQ-A91K 5 In-Frame Intra-chr q33.1 q33.1 Seq+ 12740 ChimerSeq FusionScan TCGA_RNA-Seq RCOR1-TECPR2 RCOR1 chr14 103059662 + TECPR2 chr14 102963315 + Exonic hg19 STAD TCGA-VQ-A91K 5 Out-of-Frame Intra-chr q32.31 q32.31 Seq+ 12741 ChimerSeq FusionScan TCGA_RNA-Seq FAM162A-CASR FAM162A chr3 122103146 + CASR chr3 121994658 + Exonic hg19 STAD TCGA-VQ-A91K 5 Out-of-Frame Intra-chr q21.1 q13.33 Seq+ 12742 ChimerSeq FusionScan TCGA_RNA-Seq ARAP1-FCHSD2 ARAP1 chr11 72406024 - FCHSD2 chr11 72579071 - Exonic hg19 STAD TCGA-VQ-A91K 4 Out-of-Frame Intra-chr q13.4 q13.4 Seq+ 12743 ChimerSeq FusionScan TCGA_RNA-Seq TMEM59-SSBP3 TMEM59 chr1 54502282 - SSBP3 chr1 54723822 - Exonic hg19 STAD TCGA-VQ-A91K 4 In-Frame Intra-chr p32.3 p32.3 Seq+ 12744 ChimerSeq FusionScan TCGA_RNA-Seq BRE-GPN1 BRE chr2 28152775 + GPN1 chr2 27852725 + Exonic hg19 STAD TCGA-VQ-A91K 3 Out-of-Frame Intra-chr p23.3 Seq+ 12745 ChimerSeq FusionScan TCGA_RNA-Seq TMEM59-SSBP3 TMEM59 chr1 54502282 - SSBP3 chr1 54717533 - Exonic hg19 STAD TCGA-VQ-A91K 2 In-Frame Intra-chr p32.3 p32.3 Seq+ 12746 ChimerSeq FusionScan TCGA_RNA-Seq RNF213-CKMT1B RNF213 chr17 78265626 + CKMT1B chr15 43891024 + Exonic hg19 STAD TCGA-VQ-A91K 2 Out-of-Frame Inter-chr q25.3 Oncogene q15.3 12747 ChimerSeq FusionScan TCGA_RNA-Seq SGPL1-ADAMTS14 SGPL1 chr10 72576636 + ADAMTS14 chr10 72489049 + Exonic hg19 STAD TCGA-VQ-A91K 2 In-Frame Intra-chr q22.1 q22.1 Seq+ 12748 ChimerSeq FusionScan TCGA_RNA-Seq FGFR2-TACC2 FGFR2 chr10 123243211 - TACC2 chr10 123996909 + Exonic hg19 STAD TCGA-BR-8080 7 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q26.13 Seq+ 12749 ChimerSeq FusionScan TCGA_RNA-Seq MMP15-CCDC135 MMP15 chr16 58060416 + CCDC135 chr16 57761210 + Exonic hg19 STAD TCGA-BR-8080 6 In-Frame Intra-chr q21 Seq+ 12750 ChimerSeq FusionScan TCGA_RNA-Seq TMX2-MS4A15 TMX2 chr11 57480279 + MS4A15 chr11 60538763 + Exonic hg19 STAD TCGA-BR-8080 3 In-Frame Intra-chr q12.1 q12.2 Seq+ 12751 ChimerSeq FusionScan TCGA_RNA-Seq PARP4-CBFA2T2 PARP4 chr13 25086843 - CBFA2T2 chr20 32224445 + Exonic hg19 STAD TCGA-BR-8080 2 5'UTR-CDS Inter-chr q12.12 q11.21 12752 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R5A-CD55 PPP2R5A chr1 212506940 + CD55 chr1 207532890 + Exonic hg19 STAD TCGA-BR-8080 2 Out-of-Frame Intra-chr q32.3 q32.2 12753 ChimerSeq FusionScan TCGA_RNA-Seq EIF2AK3-MBD2 EIF2AK3 chr2 88913241 - MBD2 chr18 51715381 - Exonic hg19 STAD TCGA-BR-8080 2 In-Frame Inter-chr p11.2 q21.2 Transcription factor Seq+ 12754 ChimerSeq FusionScan TCGA_RNA-Seq HIST1H2BD-NPDC1 HIST1H2BD chr6 26158787 + NPDC1 chr9 139937525 - Exonic hg19 STAD TCGA-BR-8080 2 3'UTR-CDS Inter-chr p22.2 q34.3 12755 ChimerSeq FusionScan TCGA_RNA-Seq HMGA2-VMP1 HMGA2 chr12 66232349 + VMP1 chr17 57886156 + Exonic hg19 STAD TCGA-BR-8080 2 In-Frame Inter-chr q14.3 Transcription factor q23.1 12756 ChimerSeq FusionScan TCGA_RNA-Seq SBF2-KNTC1 SBF2 chr11 10215448 - KNTC1 chr12 123060089 + Exonic hg19 STAD TCGA-BR-8080 2 In-Frame Inter-chr p15.4 q24.31 Seq+ 12757 ChimerSeq FusionScan TCGA_RNA-Seq DYM-HNRNPUL1 DYM chr18 46986767 - HNRNPUL1 chr19 41798149 + Exonic hg19 STAD TCGA-BR-8080 2 5'UTR-CDS Inter-chr q21.1 q13.2 Seq+ 12758 ChimerSeq FusionScan TCGA_RNA-Seq TNFRSF11A-SEC31A TNFRSF11A chr18 60017170 + SEC31A chr4 83750211 - Exonic hg19 STAD TCGA-HJ-7597 2 In-Frame Inter-chr q21.33 q21.22 12759 ChimerSeq FusionScan TCGA_RNA-Seq RAB18-PTCHD3 RAB18 chr10 27798859 + PTCHD3 chr10 27700858 - Exonic hg19 STAD TCGA-HJ-7597 2 Out-of-Frame Intra-chr p12.1 p12.1 12760 ChimerSeq FusionScan TCGA_RNA-Seq TFB2M-SMYD3 TFB2M chr1 246727647 - SMYD3 chr1 246093239 - Exonic hg19 STAD TCGA-BR-8077 8 In-Frame Intra-chr q44 q44 Transcription factor Seq+ 12761 ChimerSeq FusionScan TCGA_RNA-Seq XKR9-LACTB2 XKR9 chr8 71581773 + LACTB2 chr8 71556478 - Exonic hg19 STAD TCGA-BR-8077 3 5'UTR-CDS Intra-chr q13.3 q13.3 Seq+ 12762 ChimerSeq FusionScan TCGA_RNA-Seq DENND4A-HBD DENND4A chr15 66084347 - HBD chr11 5255443 - Exonic hg19 STAD TCGA-BR-8077 3 5'UTR-CDS Inter-chr q22.31 p15.4 Seq+ 12763 ChimerSeq FusionScan TCGA_RNA-Seq ZFAND3-NFYC ZFAND3 chr6 37787792 + NFYC chr1 41204507 + Exonic hg19 STAD TCGA-BR-8077 2 CDS-5'UTR Inter-chr p21.2 p34.2 Transcription factor 12764 ChimerSeq FusionScan TCGA_RNA-Seq TPX2-ACLY TPX2 chr20 30330450 + ACLY chr17 40070149 - Exonic hg19 STAD TCGA-BR-8077 2 5'UTR-5'UTR Inter-chr q11.21 q21.2 Seq+ 12765 ChimerSeq FusionScan TCGA_RNA-Seq SPPL3-CPS1 SPPL3 chr12 121341647 - CPS1 chr2 211421442 + Exonic hg19 STAD TCGA-CD-8526 9 Out-of-Frame Inter-chr q24.31 q34 Seq+ 12766 ChimerSeq FusionScan TCGA_RNA-Seq CPS1-SPPL3 CPS1 chr2 211460306 + SPPL3 chr12 121248689 - Exonic hg19 STAD TCGA-CD-8526 8 Out-of-Frame Inter-chr q34 q24.31 Seq+ 12767 ChimerSeq FusionScan TCGA_RNA-Seq DGCR2-SLC25A1 DGCR2 chr22 19050714 - SLC25A1 chr22 19164463 - Exonic hg19 STAD TCGA-CD-8526 3 In-Frame Intra-chr q11.21 q11.21 Seq+ 12768 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-SEPT14 PVT1 chr8 128806980 + SEPT14 chr7 55874951 - Exonic hg19 STAD TCGA-CD-8526 3 5'UTR-CDS Inter-chr q24.21 p11.2 Seq+ 12769 ChimerSeq FusionScan TCGA_RNA-Seq RNMT-STK10 RNMT chr18 13734598 + STK10 chr5 171554425 - Exonic hg19 STAD TCGA-CD-8526 2 Out-of-Frame Inter-chr p11.21 q35.1 Tumor suppressor gene 12770 ChimerSeq FusionScan TCGA_RNA-Seq SLCO5A1-BAGE5 SLCO5A1 chr8 70744001 - BAGE5 chr21 11058324 - Exonic hg19 STAD TCGA-CD-8526 2 CDS-3'UTR Inter-chr q13.3 12771 ChimerSeq FusionScan TCGA_RNA-Seq AEBP2-PLEKHA5 AEBP2 chr12 19615651 + PLEKHA5 chr12 19440406 + Exonic hg19 STAD TCGA-CD-8526 2 In-Frame Intra-chr p12.3 Transcription factor p12.3 Seq+ 12772 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD46-POLR2M ANKRD46 chr8 101571938 - POLR2M chr15 58004181 + Exonic hg19 STAD TCGA-RD-A8N2 3 5'UTR-5'UTR Inter-chr q22.3 q21.3 12773 ChimerSeq FusionScan TCGA_RNA-Seq RBM6-ARL6IP5 RBM6 chr3 50000118 + ARL6IP5 chr3 69150989 + Exonic hg19 STAD TCGA-RD-A8N2 2 In-Frame Intra-chr p21.31 Tumor suppressor gene p14.1 Tumor suppressor gene 12774 ChimerSeq FusionScan TCGA_RNA-Seq ZNF738-CHMP1A ZNF738 chr19 21558766 + CHMP1A chr16 89713739 - Exonic hg19 STAD TCGA-RD-A8N2 2 5'UTR-CDS Inter-chr p12 q24.3 Seq+ 12775 ChimerSeq FusionScan TCGA_RNA-Seq ZNF738-WDR4 ZNF738 chr19 21558766 + WDR4 chr21 44263391 - Exonic hg19 STAD TCGA-RD-A8N2 2 5'UTR-3'UTR Inter-chr p12 q22.3 12776 ChimerSeq FusionScan TCGA_RNA-Seq YAP1-WWTR1 YAP1 chr11 102098312 + WWTR1 chr3 149238776 - Exonic hg19 STAD TCGA-RD-A8N2 2 In-Frame Inter-chr q22.1 Tumor suppressor gene q25.1 12777 ChimerSeq FusionScan TCGA_RNA-Seq RBM6-NR1H2 RBM6 chr3 50012825 + NR1H2 chr19 50879975 + Exonic hg19 STAD TCGA-RD-A8N2 2 CDS-5'UTR Inter-chr p21.31 Tumor suppressor gene q13.33 Transcription factor 12778 ChimerSeq FusionScan TCGA_RNA-Seq AHCYL1-GSTM5 AHCYL1 chr1 110551767 + GSTM5 chr1 110257568 + Exonic hg19 STAD TCGA-IN-A6RN 4 Out-of-Frame Intra-chr p13.3 Tumor suppressor gene p13.3 Seq+ 12779 ChimerSeq FusionScan TCGA_RNA-Seq GALK2-C15orf33 GALK2 chr15 49584734 + C15orf33 chr15 49663596 - Exonic hg19 STAD TCGA-IN-A6RN 3 In-Frame Intra-chr q21.1 12780 ChimerSeq FusionScan TCGA_RNA-Seq B4GALT1-BAG1 B4GALT1 chr9 33166755 - BAG1 chr9 33262828 - Exonic hg19 STAD TCGA-IN-A6RN 3 In-Frame Intra-chr p21.1 p13.3 Seq+ 12781 ChimerSeq FusionScan TCGA_RNA-Seq TNPO1-STIP1 TNPO1 chr5 72179059 + STIP1 chr11 63971525 + Exonic hg19 STAD TCGA-IN-A6RN 3 Out-of-Frame Inter-chr q13.2 q13.1 12782 ChimerSeq FusionScan TCGA_RNA-Seq TMED5-RAB18 TMED5 chr1 93645610 - RAB18 chr10 27821435 + Exonic hg19 STAD TCGA-IN-A6RN 2 In-Frame Inter-chr p22.1 p12.1 12783 ChimerSeq FusionScan TCGA_RNA-Seq TP53I3-CENPO TP53I3 chr2 24305754 - CENPO chr2 25022543 + Exonic hg19 STAD TCGA-IN-A6RN 2 In-Frame Intra-chr p23.3 p23.3 12784 ChimerSeq FusionScan TCGA_RNA-Seq TANC1-PSMD14 TANC1 chr2 159857701 + PSMD14 chr2 162175332 + Exonic hg19 STAD TCGA-IN-A6RN 2 5'UTR-5'UTR Intra-chr q24.2 q24.2 12785 ChimerSeq FusionScan TCGA_RNA-Seq CCZ1-ARSG CCZ1 chr7 5940563 + ARSG chr17 66364688 + Exonic hg19 STAD TCGA-IN-A6RN 2 Out-of-Frame Inter-chr p22.1 q24.2 12786 ChimerSeq FusionScan TCGA_RNA-Seq MYZAP-TPM1 MYZAP chr15 57953731 + TPM1 chr15 63349183 + Exonic hg19 STAD TCGA-IN-A6RN 2 In-Frame Intra-chr q21.3 q22.2 12787 ChimerSeq FusionScan TCGA_RNA-Seq CLIP1-MPHOSPH9 CLIP1 chr12 122837272 - MPHOSPH9 chr12 123682881 - Exonic hg19 STAD TCGA-IN-A6RN 2 Out-of-Frame Intra-chr q24.31 q24.31 12788 ChimerSeq FusionScan TCGA_RNA-Seq C6orf106-PINX1 C6orf106 chr6 34614377 - PINX1 chr8 10623426 - Exonic hg19 STAD TCGA-VQ-AA6I 10 Out-of-Frame Inter-chr p21.31 p23.1 Tumor suppressor gene Seq+ 12789 ChimerSeq FusionScan TCGA_RNA-Seq CAPZA1-ST7L CAPZA1 chr1 113162505 + ST7L chr1 113125094 - Exonic hg19 STAD TCGA-VQ-AA6I 7 Out-of-Frame Intra-chr p13.2 p13.2 12790 ChimerSeq FusionScan TCGA_RNA-Seq ATXN7L1-EGFR ATXN7L1 chr7 105516257 - EGFR chr7 55209978 + Exonic hg19 STAD TCGA-VQ-AA6I 7 In-Frame Intra-chr q22.3 p11.2 TK:EGFR Oncogene 12791 ChimerSeq FusionScan TCGA_RNA-Seq CAPZA1-ST7L CAPZA1 chr1 113162505 + ST7L chr1 113134225 - Exonic hg19 STAD TCGA-VQ-AA6I 6 Out-of-Frame Intra-chr p13.2 p13.2 12792 ChimerSeq FusionScan TCGA_RNA-Seq EGFR-ATXN7L1 EGFR chr7 55269475 + ATXN7L1 chr7 105251050 - Exonic hg19 STAD TCGA-VQ-AA6I 3 In-Frame Intra-chr p11.2 TK:EGFR Oncogene q22.3 12793 ChimerSeq FusionScan TCGA_RNA-Seq CAPZA1-ST7L CAPZA1 chr1 113162505 + ST7L chr1 113119710 - Exonic hg19 STAD TCGA-VQ-AA6I 3 Out-of-Frame Intra-chr p13.2 p13.2 12794 ChimerSeq FusionScan TCGA_RNA-Seq GCN1L1-TROAP GCN1L1 chr12 120574305 - TROAP chr12 49723639 + Exonic hg19 STAD TCGA-VQ-AA6I 2 In-Frame Intra-chr q13.12 12795 ChimerSeq FusionScan TCGA_RNA-Seq AP1S3-LRRFIP1 AP1S3 chr2 224702164 - LRRFIP1 chr2 238617186 + Exonic hg19 STAD TCGA-VQ-AA6I 2 In-Frame Intra-chr q36.1 q37.3 12796 ChimerSeq FusionScan TCGA_RNA-Seq CAPZA1-ST7L CAPZA1 chr1 113162505 + ST7L chr1 113121039 - Exonic hg19 STAD TCGA-VQ-AA6I 2 Out-of-Frame Intra-chr p13.2 p13.2 12797 ChimerSeq FusionScan TCGA_RNA-Seq CARD17-CASP1 CARD17 chr11 104972134 - CASP1 chr11 104905201 - Exonic hg19 STAD TCGA-VQ-AA6I 2 In-Frame Intra-chr q22.3 q22.3 12798 ChimerSeq FusionScan TCGA_RNA-Seq ZMYM6-TCF25 ZMYM6 chr1 35480297 - TCF25 chr16 89949758 + Exonic hg19 STAD TCGA-VQ-AA6I 2 In-Frame Inter-chr p34.3 q24.3 12799 ChimerSeq FusionScan TCGA_RNA-Seq CAPZA1-ST7L CAPZA1 chr1 113162505 + ST7L chr1 113084712 - Exonic hg19 STAD TCGA-VQ-AA6I 2 Out-of-Frame Intra-chr p13.2 p13.2 12800 ChimerSeq FusionScan TCGA_RNA-Seq CRHR1-KANSL1 CRHR1 chr17 43699407 + KANSL1 chr17 44249598 - Exonic hg19 STAD TCGA-CD-5799 3 5'UTR-5'UTR Intra-chr q21.31 Pub 12801 ChimerSeq FusionScan TCGA_RNA-Seq ACACA-LGALS9 ACACA chr17 35627641 - LGALS9 chr17 25965288 + Exonic hg19 STAD TCGA-CD-5799 3 In-Frame Intra-chr q11.2 Seq+ 12802 ChimerSeq FusionScan TCGA_RNA-Seq DANCR-TBX3 DANCR chr4 53579126 + TBX3 chr12 115110107 - Exonic hg19 STAD TCGA-CD-5799 2 5'UTR-CDS Inter-chr q12 q24.21 Transcription factor 12803 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD54-RPLP0 ANKRD54 chr22 38236193 - RPLP0 chr12 120635265 - Exonic hg19 STAD TCGA-CD-5799 2 Out-of-Frame Inter-chr q13.1 q24.23 Seq+ 12804 ChimerSeq FusionScan TCGA_RNA-Seq PGAP3-STARD3 PGAP3 chr17 37840849 - STARD3 chr17 37816463 + Exonic hg19 STAD TCGA-CD-5799 2 In-Frame Intra-chr q12 Oncogene q12 Seq+ 12805 ChimerSeq FusionScan TCGA_RNA-Seq TMC5-COL4A1 TMC5 chr16 19490850 + COL4A1 chr13 110819577 - Exonic hg19 STAD TCGA-CD-5799 2 Out-of-Frame Inter-chr p12.3 q34 12806 ChimerSeq FusionScan TCGA_RNA-Seq PTK2-TRAPPC9 PTK2 chr8 142011223 - TRAPPC9 chr8 141034176 - Exonic hg19 STAD TCGA-CD-5799 2 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 12807 ChimerSeq FusionScan TCGA_RNA-Seq TUBD1-TBX6 TUBD1 chr17 57970057 - TBX6 chr16 30098172 - Exonic hg19 STAD TCGA-CD-5799 2 5'UTR-CDS Inter-chr q23.1 p11.2 Transcription factor Seq+ 12808 ChimerSeq FusionScan TCGA_RNA-Seq C19orf48-BRK1 C19orf48 chr19 51305473 - BRK1 chr3 10167309 + Exonic hg19 STAD TCGA-CD-5799 2 5'UTR-CDS Inter-chr q13.33 p25.3 Seq+ 12809 ChimerSeq FusionScan TCGA_RNA-Seq PGAP3-AATF PGAP3 chr17 37844086 - AATF chr17 35413900 + Exonic hg19 STAD TCGA-CD-5799 2 Out-of-Frame Intra-chr q12 Oncogene 12810 ChimerSeq FusionScan TCGA_RNA-Seq CPD-KANSL1 CPD chr17 28712254 + KANSL1 chr17 44249598 - Exonic hg19 STAD TCGA-CD-5799 2 CDS-5'UTR Intra-chr q11.2 Tumor suppressor gene 12811 ChimerSeq FusionScan TCGA_RNA-Seq SCHIP1-MBNL1 SCHIP1 chr3 159482888 + MBNL1 chr3 152132729 + Exonic hg19 STAD TCGA-D7-A748 2 In-Frame Intra-chr q25.33 q25.1 12812 ChimerSeq FusionScan TCGA_RNA-Seq FAT3-RIN3 FAT3 chr11 92088570 + RIN3 chr14 93081751 + Exonic hg19 STAD TCGA-D7-A748 2 In-Frame Inter-chr q32.12 12813 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 STAD TCGA-CD-5801 2 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 12814 ChimerSeq FusionScan TCGA_RNA-Seq PRSS3-UBE2R2 PRSS3 chr9 33750725 + UBE2R2 chr9 33886878 + Exonic hg19 STAD TCGA-CD-5801 2 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 12815 ChimerSeq FusionScan TCGA_RNA-Seq ATXN2-MTAP ATXN2 chr12 112036587 - MTAP chr9 21859301 + Exonic hg19 STAD TCGA-CD-5801 2 Out-of-Frame Inter-chr q24.12 p21.3 Tumor suppressor gene 12816 ChimerSeq FusionScan TCGA_RNA-Seq SNX27-ATP6V0E1 SNX27 chr1 151584988 + ATP6V0E1 chr5 172421777 + Exonic hg19 STAD TCGA-CD-5801 2 In-Frame Inter-chr q21.3 q35.1 12817 ChimerSeq FusionScan TCGA_RNA-Seq TMTC3-SHMT1 TMTC3 chr12 88570096 + SHMT1 chr17 18250970 - Exonic hg19 STAD TCGA-CD-5801 2 In-Frame Inter-chr q21.32 p11.2 12818 ChimerSeq FusionScan TCGA_RNA-Seq EDEM3-BPTF EDEM3 chr1 184681566 - BPTF chr17 65941524 + Exonic hg19 STAD TCGA-CD-5801 2 Out-of-Frame Inter-chr q25.3 q24.2 Transcription factor 12819 ChimerSeq FusionScan TCGA_RNA-Seq DANCR-PAFAH1B1 DANCR chr4 53579126 + PAFAH1B1 chr17 2541392 + Exonic hg19 STAD TCGA-B7-A5TI 2 5'UTR-5'UTR Inter-chr q12 p13.3 Tumor suppressor gene 12820 ChimerSeq FusionScan TCGA_RNA-Seq CSNK1G2-GABRD CSNK1G2 chr19 1941417 + GABRD chr1 1956380 + Exonic hg19 STAD TCGA-B7-A5TI 2 5'UTR-CDS Inter-chr p13.3 p36.33 12821 ChimerSeq FusionScan TCGA_RNA-Seq ZAK-TMEM163 ZAK chr2 173940730 + TMEM163 chr2 135308232 - Exonic hg19 STAD TCGA-B7-A5TI 2 5'UTR-CDS Intra-chr TKL:MLK q21.3 12822 ChimerSeq FusionScan TCGA_RNA-Seq POU2AF1-C11orf92 POU2AF1 chr11 111228169 - C11orf92 chr11 111169391 - Exonic hg19 STAD TCGA-CD-8531 12 CDS-3'UTR Intra-chr q23.1 Transcription factor 12823 ChimerSeq FusionScan TCGA_RNA-Seq FCHSD2-ZNF705D FCHSD2 chr11 72851075 - ZNF705D chr8 11965631 + Exonic hg19 STAD TCGA-CD-8531 9 CDS-5'UTR Inter-chr q13.4 p23.1 Transcription factor 12824 ChimerSeq FusionScan TCGA_RNA-Seq RICTOR-MEF2C RICTOR chr5 39074430 - MEF2C chr5 88119744 - Exonic hg19 STAD TCGA-CD-8531 3 CDS-5'UTR Intra-chr p13.1 q14.3 Transcription factor 12825 ChimerSeq FusionScan TCGA_RNA-Seq RPL10-GNB2 RPL10 chrX 153626883 + GNB2 chr7 100274974 + Exonic hg19 STAD TCGA-CD-8531 2 In-Frame Inter-chr q28 Tumor suppressor gene q22.1 12826 ChimerSeq FusionScan TCGA_RNA-Seq ZNF292-AKIRIN2 ZNF292 chr6 87928449 + AKIRIN2 chr6 88391481 - Exonic hg19 STAD TCGA-CD-8531 2 In-Frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q15 Seq+ 12827 ChimerSeq FusionScan TCGA_RNA-Seq SEC14L1-RAB14 SEC14L1 chr17 75139741 + RAB14 chr9 123955697 - Exonic hg19 STAD TCGA-CD-8531 2 CDS-5'UTR Inter-chr q25.2 q33.2 12828 ChimerSeq FusionScan TCGA_RNA-Seq UBE2G1-FNBP1 UBE2G1 chr17 4269565 - FNBP1 chr9 132652825 - Exonic hg19 STAD TCGA-CD-8531 2 In-Frame Inter-chr p13.2 q34.11 12829 ChimerSeq FusionScan TCGA_RNA-Seq DOPEY1-CYB5R4 DOPEY1 chr6 83777498 + CYB5R4 chr6 84603240 + Exonic hg19 STAD TCGA-CD-8531 2 5'UTR-CDS Intra-chr q14.1 q14.2 Seq+ 12830 ChimerSeq FusionScan TCGA_RNA-Seq FADS3-RPS9 FADS3 chr11 61644337 - RPS9 chr19 54711265 + Exonic hg19 STAD TCGA-CD-8531 2 CDS-3'UTR Inter-chr q12.2 12831 ChimerSeq FusionScan TCGA_RNA-Seq ATG13-MTCH2 ATG13 chr11 46667539 + MTCH2 chr11 47656286 - Exonic hg19 STAD TCGA-CD-8531 2 In-Frame Intra-chr p11.2 p11.2 12832 ChimerSeq FusionScan TCGA_RNA-Seq RPRD1A-MAP4K4 RPRD1A chr18 33647216 - MAP4K4 chr2 102472438 + Exonic hg19 STAD TCGA-BR-A4CS 3 Out-of-Frame Inter-chr q12.2 q11.2 12833 ChimerSeq FusionScan TCGA_RNA-Seq FAM176C-ABCG1 FAM176C chr21 33785321 + ABCG1 chr21 43691179 + Exonic hg19 STAD TCGA-BR-A4CS 3 In-Frame Intra-chr q22.3 12834 ChimerSeq FusionScan TCGA_RNA-Seq ENC1-ZFAND3 ENC1 chr5 73936131 - ZFAND3 chr6 37897734 + Exonic hg19 STAD TCGA-BR-A4CS 2 5'UTR-CDS Inter-chr q13.3 p21.2 12835 ChimerSeq FusionScan TCGA_RNA-Seq RBM6-CASC4 RBM6 chr3 50000118 + CASC4 chr15 44671887 + Exonic hg19 STAD TCGA-BR-A4CS 2 Out-of-Frame Inter-chr p21.31 Tumor suppressor gene q15.3 12836 ChimerSeq FusionScan TCGA_RNA-Seq ELN-SYTL2 ELN chr7 73467639 + SYTL2 chr11 85429886 - Exonic hg19 STAD TCGA-BR-A4CS 2 In-Frame Inter-chr q11.23 q14.1 12837 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC13-IRAK3 DNAJC13 chr3 132153462 + IRAK3 chr12 66597490 + Exonic hg19 STAD TCGA-BR-A4CS 2 Out-of-Frame Inter-chr q22.1 q14.3 TKL:IRAK 12838 ChimerSeq FusionScan TCGA_RNA-Seq PPP4R1-UBAP2L PPP4R1 chr18 9595015 - UBAP2L chr1 154223516 + Exonic hg19 STAD TCGA-BR-8588 3 Out-of-Frame Inter-chr p11.22 q21.3 12839 ChimerSeq FusionScan TCGA_RNA-Seq PPP3R1-ANXA4 PPP3R1 chr2 68444223 - ANXA4 chr2 70031664 + Exonic hg19 STAD TCGA-BR-8588 2 CDS-5'UTR Intra-chr p14 p13.3 12840 ChimerSeq FusionScan TCGA_RNA-Seq MAPKAP1-ADK MAPKAP1 chr9 128469249 - ADK chr10 76468078 + Exonic hg19 STAD TCGA-BR-8588 2 5'UTR-CDS Inter-chr q33.3 q22.2 12841 ChimerSeq FusionScan TCGA_RNA-Seq CIRH1A-ZFPM1 CIRH1A chr16 69201088 + ZFPM1 chr16 88593221 + Exonic hg19 STAD TCGA-BR-8588 2 In-Frame Intra-chr q24.2 Transcription factor 12842 ChimerSeq FusionScan TCGA_RNA-Seq LRP5-CCND1 LRP5 chr11 68171167 + CCND1 chr11 69462761 + Exonic hg19 STAD TCGA-HU-8602 2 In-Frame Intra-chr q13.2 q13.3 Oncogene 12843 ChimerSeq FusionScan TCGA_RNA-Seq EEF1D-NPDC1 EEF1D chr8 144679048 - NPDC1 chr9 139935639 - Exonic hg19 STAD TCGA-HU-8602 2 5'UTR-CDS Inter-chr q34.3 12844 ChimerSeq FusionScan TCGA_RNA-Seq ARID4B-RBM34 ARID4B chr1 235377083 - RBM34 chr1 235295312 - Exonic hg19 STAD TCGA-HU-8602 2 Out-of-Frame Intra-chr q42.3 q42.3 12845 ChimerSeq FusionScan TCGA_RNA-Seq MAGI1-SSX2IP MAGI1 chr3 65367551 - SSX2IP chr1 85124151 - Exonic hg19 STAD TCGA-HU-8602 2 Out-of-Frame Inter-chr Oncogene p22.3 12846 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP39-PLEC ARHGAP39 chr8 145830919 - PLEC chr8 145012860 - Exonic hg19 STAD TCGA-HU-8602 2 Out-of-Frame Intra-chr q24.3 q24.3 12847 ChimerSeq FusionScan TCGA_RNA-Seq BACE2-WDR81 BACE2 chr21 42540502 + WDR81 chr17 1638865 + Exonic hg19 STAD TCGA-BR-7901 9 Out-of-Frame Inter-chr q22.2 Seq+ 12848 ChimerSeq FusionScan TCGA_RNA-Seq LUC7L3-ABCC3 LUC7L3 chr17 48797192 + ABCC3 chr17 48744914 + Exonic hg19 STAD TCGA-BR-7901 8 In-Frame Intra-chr q21.33 q21.33 Seq+ 12849 ChimerSeq FusionScan TCGA_RNA-Seq FOXJ3-ZMYND12 FOXJ3 chr1 42730785 - ZMYND12 chr1 42902214 - Exonic hg19 STAD TCGA-BR-7901 6 In-Frame Intra-chr p34.2 Transcription factor p34.2 Seq+ 12850 ChimerSeq FusionScan TCGA_RNA-Seq AP2A2-TALDO1 AP2A2 chr11 926088 + TALDO1 chr11 755878 + Exonic hg19 STAD TCGA-BR-7901 6 In-Frame Intra-chr p15.5 p15.5 Seq+ 12851 ChimerSeq FusionScan TCGA_RNA-Seq EDF1-DPP7 EDF1 chr9 139760632 - DPP7 chr9 140005402 - Exonic hg19 STAD TCGA-BR-7901 4 In-Frame Intra-chr q34.3 q34.3 Seq+ 12852 ChimerSeq FusionScan TCGA_RNA-Seq CWC25-PLXDC1 CWC25 chr17 36969047 - PLXDC1 chr17 37265644 - Exonic hg19 STAD TCGA-BR-7901 4 In-Frame Intra-chr q12 q12 Seq+ 12853 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0319L-PSMB2 KIAA0319L chr1 36019950 - PSMB2 chr1 36102033 - Exonic hg19 STAD TCGA-BR-7901 3 In-Frame Intra-chr p34.3 p34.3 Seq+ 12854 ChimerSeq FusionScan TCGA_RNA-Seq PTPRG-MED29 PTPRG chr3 61734656 + MED29 chr19 39883103 + Exonic hg19 STAD TCGA-BR-7901 2 Out-of-Frame Inter-chr p14.2 q13.2 12855 ChimerSeq FusionScan TCGA_RNA-Seq NBEAL2-ATP2A3 NBEAL2 chr3 47021402 + ATP2A3 chr17 3848442 - Exonic hg19 STAD TCGA-BR-7901 2 In-Frame Inter-chr p21.31 p13.2 Seq+ 12856 ChimerSeq FusionScan TCGA_RNA-Seq RALGPS1-LSM2 RALGPS1 chr9 129796793 + LSM2 chr6 31766284 - Exonic hg19 STAD TCGA-BR-7901 2 CDS-5'UTR Inter-chr q33.3 12857 ChimerSeq FusionScan TCGA_RNA-Seq USP48-HSPG2 USP48 chr1 22109316 - HSPG2 chr1 22162130 - Exonic hg19 STAD TCGA-BR-7901 2 In-Frame Intra-chr p36.12 p36.12 Seq+ 12858 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-STARD3 GRB7 chr17 37894645 + STARD3 chr17 37809733 + Exonic hg19 STAD TCGA-BR-7901 2 5'UTR-5'UTR Intra-chr q12 q12 Seq+ 12859 ChimerSeq FusionScan TCGA_RNA-Seq ATP11B-PLSCR1 ATP11B chr3 182511574 + PLSCR1 chr3 146243434 - Exonic hg19 STAD TCGA-BR-7901 2 In-Frame Intra-chr q26.33 Oncogene q24 Transcription factor 12860 ChimerSeq FusionScan TCGA_RNA-Seq CIRH1A-CHTF8 CIRH1A chr16 69166592 + CHTF8 chr16 69155396 - Exonic hg19 STAD TCGA-BR-7901 2 5'UTR-5'UTR Intra-chr q22.1 12861 ChimerSeq FusionScan TCGA_RNA-Seq ITCH-THAP4 ITCH chr20 32981687 + THAP4 chr2 242545888 - Exonic hg19 STAD TCGA-BR-7901 2 In-Frame Inter-chr q11.22 q37.3 Transcription factor 12862 ChimerSeq FusionScan TCGA_RNA-Seq NIPBL-FAM126B NIPBL chr5 36877280 + FAM126B chr2 201888762 - Exonic hg19 STAD TCGA-BR-7901 2 5'UTR-5'UTR Inter-chr p13.2 q33.1 12863 ChimerSeq FusionScan TCGA_RNA-Seq SORBS2-ASPH SORBS2 chr4 186599576 - ASPH chr8 62489417 - Exonic hg19 STAD TCGA-BR-7901 2 In-Frame Inter-chr q35.1 q12.3 12864 ChimerSeq FusionScan TCGA_RNA-Seq ZNF585A-MYRIP ZNF585A chr19 37660740 - MYRIP chr3 40223710 + Exonic hg19 STAD TCGA-BR-7901 2 5'UTR-CDS Inter-chr q13.12 Transcription factor p22.1 12865 ChimerSeq FusionScan TCGA_RNA-Seq CYB5R3-ARFGAP3 CYB5R3 chr22 43045300 - ARFGAP3 chr22 43195166 - Exonic hg19 STAD TCGA-BR-7901 2 Out-of-Frame Intra-chr q13.2 q13.2 Seq+ 12866 ChimerSeq FusionScan TCGA_RNA-Seq SRSF11-HHLA3 SRSF11 chr1 70712590 + HHLA3 chr1 70832126 + Exonic hg19 STAD TCGA-BR-7901 2 In-Frame Intra-chr p31.1 p31.1 12867 ChimerSeq FusionScan TCGA_RNA-Seq BACE2-SERPINF2 BACE2 chr21 42540502 + SERPINF2 chr17 1648285 + Exonic hg19 STAD TCGA-BR-7901 2 CDS-5'UTR Inter-chr q22.2 p13.3 12868 ChimerSeq FusionScan TCGA_RNA-Seq ITGA6-HAT1 ITGA6 chr2 173292698 + HAT1 chr2 172809398 + Exonic hg19 STAD TCGA-BR-7901 2 In-Frame Intra-chr q31.1 q31.1 Seq+ 12869 ChimerSeq FusionScan TCGA_RNA-Seq XIAP-STAG2 XIAP chrX 122994143 + STAG2 chrX 123155216 + Exonic hg19 STAD TCGA-BR-7901 2 5'UTR-5'UTR Intra-chr q25 q25 Oncogene 12870 ChimerSeq FusionScan TCGA_RNA-Seq TCERG1-ASAP2 TCERG1 chr5 145826971 + ASAP2 chr2 9498884 + Exonic hg19 STAD TCGA-BR-7901 2 Out-of-Frame Inter-chr q32 p25.1 12871 ChimerSeq FusionScan TCGA_RNA-Seq MEGF6-PLCH2 MEGF6 chr1 3431113 - PLCH2 chr1 2415886 + Exonic hg19 STAD TCGA-VQ-AA6F 2 Out-of-Frame Intra-chr p36.32 p36.32 12872 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-RSBN1L PTPN12 chr7 77230123 + RSBN1L chr7 77365726 + Exonic hg19 STAD TCGA-BR-8382 2 Out-of-Frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 12873 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-RSBN1L PTPN12 chr7 77200503 + RSBN1L chr7 77365726 + Exonic hg19 STAD TCGA-BR-8382 2 In-Frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 12874 ChimerSeq FusionScan TCGA_RNA-Seq FOXK2-TBCD FOXK2 chr17 80526077 + TBCD chr17 80897242 + Exonic hg19 STAD TCGA-BR-8382 2 In-Frame Intra-chr q25.3 Transcription factor Seq+ 12875 ChimerSeq FusionScan TCGA_RNA-Seq NDRG3-EIF3D NDRG3 chr20 35312815 - EIF3D chr22 36907833 - Exonic hg19 STAD TCGA-BR-8382 2 In-Frame Inter-chr q11.23 q12.3 12876 ChimerSeq FusionScan TCGA_RNA-Seq DIS3L2-WDR75 DIS3L2 chr2 233028342 + WDR75 chr2 190313104 + Exonic hg19 STAD TCGA-BR-A4J9 2 In-Frame Intra-chr q37.1 q32.2 Seq+ 12877 ChimerSeq FusionScan TCGA_RNA-Seq FANCA-GRWD1 FANCA chr16 89877114 - GRWD1 chr19 48953569 + Exonic hg19 STAD TCGA-BR-A4J9 2 In-Frame Inter-chr q24.3 Oncogene q13.33 12878 ChimerSeq FusionScan TCGA_RNA-Seq SLC2A8-PDLIM7 SLC2A8 chr9 130159565 + PDLIM7 chr5 176918926 - Exonic hg19 STAD TCGA-BR-A4J9 2 Out-of-Frame Inter-chr q33.3 q35.3 12879 ChimerSeq FusionScan TCGA_RNA-Seq PVR-PARVB PVR chr19 45147475 + PARVB chr22 44495932 + Exonic hg19 STAD TCGA-BR-A4J9 2 In-Frame Inter-chr q13.31 q13.31 12880 ChimerSeq FusionScan TCGA_RNA-Seq LRBA-PET112 LRBA chr4 151935578 - PET112 chr4 152640690 - Exonic hg19 STAD TCGA-BR-8486 11 In-Frame Intra-chr q31.3 Seq+ 12881 ChimerSeq FusionScan TCGA_RNA-Seq GTPBP2-POLH GTPBP2 chr6 43592246 - POLH chr6 43571628 + Exonic hg19 STAD TCGA-BR-8486 7 In-Frame Intra-chr p21.1 p21.1 Seq+ 12882 ChimerSeq FusionScan TCGA_RNA-Seq STARD3-GSDMB STARD3 chr17 37793484 + GSDMB chr17 38062238 - Exonic hg19 STAD TCGA-BR-8486 2 5'UTR-CDS Intra-chr q12 q21.1 Seq+ 12883 ChimerSeq FusionScan TCGA_RNA-Seq RERE-WHSC2 RERE chr1 8425871 - WHSC2 chr4 1985840 - Exonic hg19 STAD TCGA-BR-8486 2 In-Frame Inter-chr p36.23 12884 ChimerSeq FusionScan TCGA_RNA-Seq LITAF-BCAR4 LITAF chr16 11680741 - BCAR4 chr16 11915612 - Exonic hg19 STAD TCGA-BR-8486 2 5'UTR-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 12885 ChimerSeq FusionScan TCGA_RNA-Seq ETNK1-ITPR2 ETNK1 chr12 22826594 + ITPR2 chr12 26634174 - Exonic hg19 STAD TCGA-D7-8575 6 In-Frame Intra-chr p12.1 p11.23 Seq+ 12886 ChimerSeq FusionScan TCGA_RNA-Seq FAM108C1-BHLHE41 FAM108C1 chr15 80988360 + BHLHE41 chr12 26277515 - Exonic hg19 STAD TCGA-D7-8575 2 In-Frame Inter-chr p12.1 Tumor suppressor gene Transcription factor 12887 ChimerSeq FusionScan TCGA_RNA-Seq SLC22A5-EBF1 SLC22A5 chr5 131706057 + EBF1 chr5 158204547 - Exonic hg19 STAD TCGA-D7-8575 2 In-Frame Intra-chr q31.1 q33.3 Transcription factor 12888 ChimerSeq FusionScan TCGA_RNA-Seq UBE2G1-LRRFIP2 UBE2G1 chr17 4269565 - LRRFIP2 chr3 37100401 - Exonic hg19 STAD TCGA-D7-8575 2 Out-of-Frame Inter-chr p13.2 p22.2 12889 ChimerSeq FusionScan TCGA_RNA-Seq SLC24A3-RRBP1 SLC24A3 chr20 19496208 + RRBP1 chr20 17617374 - Exonic hg19 STAD TCGA-D7-8575 2 In-Frame Intra-chr p11.23 p12.1 12890 ChimerSeq FusionScan TCGA_RNA-Seq GAB2-ATP1B3 GAB2 chr11 78128691 - ATP1B3 chr3 141622461 + Exonic hg19 STAD TCGA-D7-8575 2 Out-of-Frame Inter-chr q14.1 q23 12891 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2IP-CHD1 ERBB2IP chr5 65222634 + CHD1 chr5 98240802 - Exonic hg19 STAD TCGA-D7-8575 2 5'UTR-CDS Intra-chr q21.1 Tumor suppressor gene 12892 ChimerSeq FusionScan TCGA_RNA-Seq DDX52-IKZF3 DDX52 chr17 35985940 - IKZF3 chr17 37922746 - Exonic hg19 STAD TCGA-BR-A4J4 32 Out-of-Frame Intra-chr q12 q21.1 Tumor suppressor gene Transcription factor Seq+ 12893 ChimerSeq FusionScan TCGA_RNA-Seq DDX52-IKZF3 DDX52 chr17 35986833 - IKZF3 chr17 37922746 - Exonic hg19 STAD TCGA-BR-A4J4 13 Out-of-Frame Intra-chr q12 q21.1 Tumor suppressor gene Transcription factor Seq+ 12894 ChimerSeq FusionScan TCGA_RNA-Seq TNPO2-HNRNPUL1 TNPO2 chr19 12834062 - HNRNPUL1 chr19 41774127 + Exonic hg19 STAD TCGA-BR-A4J4 2 5'UTR-5'UTR Intra-chr p13.13 q13.2 12895 ChimerSeq FusionScan TCGA_RNA-Seq FBXO11-GET4 FBXO11 chr2 48132627 - GET4 chr7 925692 + Exonic hg19 STAD TCGA-BR-A4J4 2 Out-of-Frame Inter-chr p16.3 p22.3 12896 ChimerSeq FusionScan TCGA_RNA-Seq APP-CSNK1G3 APP chr21 27347382 - CSNK1G3 chr5 122881110 + Exonic hg19 STAD TCGA-BR-A4J4 2 CDS-5'UTR Inter-chr q21.3 q23.2 12897 ChimerSeq FusionScan TCGA_RNA-Seq DYNC2H1-GTPBP4 DYNC2H1 chr11 103178560 + GTPBP4 chr10 1051757 + Exonic hg19 STAD TCGA-BR-A4J4 2 In-Frame Inter-chr q22.3 p15.3 Tumor suppressor gene 12898 ChimerSeq FusionScan TCGA_RNA-Seq CSNK1A1-SCGB3A2 CSNK1A1 chr5 148929637 - SCGB3A2 chr5 147261008 + Exonic hg19 STAD TCGA-HU-A4GP 13 Out-of-Frame Intra-chr q32 Tumor suppressor gene q32 Seq+ 12899 ChimerSeq FusionScan TCGA_RNA-Seq ACSL5-VTI1A ACSL5 chr10 114164564 + VTI1A chr10 114286845 + Exonic hg19 STAD TCGA-HU-A4GP 6 In-Frame Intra-chr q25.2 q25.2 12900 ChimerSeq FusionScan TCGA_RNA-Seq SDHA-PDGFRB SDHA chr5 251583 + PDGFRB chr5 149516616 - Exonic hg19 STAD TCGA-HU-A4GP 3 CDS-5'UTR Intra-chr p15.33 Oncogene Tumor suppressor gene q32 Oncogene 12901 ChimerSeq FusionScan TCGA_RNA-Seq MRPL24-LMO4 MRPL24 chr1 156710803 - LMO4 chr1 87810470 + Exonic hg19 STAD TCGA-HU-A4GP 2 5'UTR-CDS Intra-chr q23.1 p22.3 12902 ChimerSeq FusionScan TCGA_RNA-Seq PERP-FBXO11 PERP chr6 138428263 - FBXO11 chr2 48066908 - Exonic hg19 STAD TCGA-HU-A4GP 2 In-Frame Inter-chr q23.3 p16.3 12903 ChimerSeq FusionScan TCGA_RNA-Seq CCDC64-VSIG10 CCDC64 chr12 120428101 + VSIG10 chr12 118533619 - Exonic hg19 STAD TCGA-HU-A4GP 2 Out-of-Frame Intra-chr q24.23 12904 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-SFT2D2 TBL1XR1 chr3 176914908 - SFT2D2 chr1 168204338 + Exonic hg19 STAD TCGA-HU-A4GP 2 5'UTR-CDS Inter-chr q26.32 q24.2 12905 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1715-HAT1 KIAA1715 chr2 176860285 - HAT1 chr2 172782046 + Exonic hg19 STAD TCGA-HU-A4GP 2 Out-of-Frame Intra-chr q31.1 12906 ChimerSeq FusionScan TCGA_RNA-Seq VPS37B-HIP1R VPS37B chr12 123380498 - HIP1R chr12 123332577 + Exonic hg19 STAD TCGA-HU-A4GP 2 In-Frame Intra-chr q24.31 q24.31 12907 ChimerSeq FusionScan TCGA_RNA-Seq KANSL1-CRHR1 KANSL1 chr17 44127898 - CRHR1 chr17 43699273 + Exonic hg19 STAD TCGA-HU-A4GP 2 CDS-5'UTR Intra-chr q21.31 12908 ChimerSeq FusionScan TCGA_RNA-Seq LETM1-MAEA LETM1 chr4 1817390 - MAEA chr4 1332861 + Exonic hg19 STAD TCGA-HU-A4GP 2 In-Frame Intra-chr p16.3 p16.3 12909 ChimerSeq FusionScan TCGA_RNA-Seq MIER3-ERBB2IP MIER3 chr5 56246454 - ERBB2IP chr5 65288537 + Exonic hg19 STAD TCGA-HU-A4GP 2 CDS-5'UTR Intra-chr q11.2 12910 ChimerSeq FusionScan TCGA_RNA-Seq LDLR-ASF1B LDLR chr19 11218190 + ASF1B chr19 14237049 - Exonic hg19 STAD TCGA-HU-A4GP 2 In-Frame Intra-chr p13.2 p13.12 12911 ChimerSeq FusionScan TCGA_RNA-Seq TXNDC11-GSPT1 TXNDC11 chr16 11824500 - GSPT1 chr16 11971437 - Exonic hg19 STAD TCGA-CG-5725 14 In-Frame Intra-chr p13.13 p13.13 Seq+ 12912 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-MGAT5 PVT1 chr8 128806980 + MGAT5 chr2 135093787 + Exonic hg19 STAD TCGA-CG-5725 3 5'UTR-CDS Inter-chr q24.21 q21.2 12913 ChimerSeq FusionScan TCGA_RNA-Seq FBXL8-DDB2 FBXL8 chr16 67195840 + DDB2 chr11 47259387 + Exonic hg19 STAD TCGA-CG-5725 2 Out-of-Frame Inter-chr q22.1 p11.2 Oncogene Tumor suppressor gene 12914 ChimerSeq FusionScan TCGA_RNA-Seq FAM49B-SERPINB6 FAM49B chr8 130915557 - SERPINB6 chr6 2969147 - Exonic hg19 STAD TCGA-CG-5725 2 5'UTR-5'UTR Inter-chr q24.21 p25.2 12915 ChimerSeq FusionScan TCGA_RNA-Seq HS2ST1-FAM40A HS2ST1 chr1 87380843 + FAM40A chr1 110580512 + Exonic hg19 STAD TCGA-CG-5725 2 Out-of-Frame Intra-chr p22.3 12916 ChimerSeq FusionScan TCGA_RNA-Seq OSBPL1A-FBRS OSBPL1A chr18 21957376 - FBRS chr16 30676035 + Exonic hg19 STAD TCGA-CG-5725 2 CDS-5'UTR Inter-chr q11.2 p11.2 Seq+ 12917 ChimerSeq FusionScan TCGA_RNA-Seq FNIP2-RXFP1 FNIP2 chr4 159782928 + RXFP1 chr4 159514552 + Exonic hg19 STAD TCGA-CG-5725 2 In-Frame Intra-chr q32.1 q32.1 Seq+ 12918 ChimerSeq FusionScan TCGA_RNA-Seq RACGAP1-LIMA1 RACGAP1 chr12 50410413 - LIMA1 chr12 50594667 - Exonic hg19 STAD TCGA-CG-4438 5 Out-of-Frame Intra-chr q13.12 q13.12 Tumor suppressor gene Seq+ 12919 ChimerSeq FusionScan TCGA_RNA-Seq ANKIB1-PEX1 ANKIB1 chr7 91948826 + PEX1 chr7 92138725 - Exonic hg19 STAD TCGA-CG-4438 3 In-Frame Intra-chr q21.2 q21.2 Seq+ 12920 ChimerSeq FusionScan TCGA_RNA-Seq SETD2-SCAP SETD2 chr3 47139444 - SCAP chr3 47484581 - Exonic hg19 STAD TCGA-BR-A4CR 5 CDS-5'UTR Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Seq+ 12921 ChimerSeq FusionScan TCGA_RNA-Seq ATP11A-ULK4 ATP11A chr13 113530255 + ULK4 chr3 41831335 - Exonic hg19 STAD TCGA-BR-A4CR 3 In-Frame Inter-chr q34 p22.1 Other:ULK Seq+ 12922 ChimerSeq FusionScan TCGA_RNA-Seq CNOT7-PCM1 CNOT7 chr8 17102544 - PCM1 chr8 17871472 + Exonic hg19 STAD TCGA-BR-A4CR 2 In-Frame Intra-chr p22 p22 12923 ChimerSeq FusionScan TCGA_RNA-Seq SEC62-BCL2L11 SEC62 chr3 169684646 + BCL2L11 chr2 111921709 + Exonic hg19 STAD TCGA-BR-A4CR 2 In-Frame Inter-chr q26.2 q13 Tumor suppressor gene 12924 ChimerSeq FusionScan TCGA_RNA-Seq NOTCH2-ZBED4 NOTCH2 chr1 120611947 - ZBED4 chr22 50276981 + Exonic hg19 STAD TCGA-BR-A4CR 2 CDS-5'UTR Inter-chr p12 Oncogene Tumor suppressor gene q13.33 Transcription factor 12925 ChimerSeq FusionScan TCGA_RNA-Seq ZMYM1-UBA1 ZMYM1 chr1 35545043 + UBA1 chrX 47069021 + Exonic hg19 STAD TCGA-BR-A4CR 2 5'UTR-CDS Inter-chr p34.3 p11.3 12926 ChimerSeq FusionScan TCGA_RNA-Seq RABGGTB-SNRNP70 RABGGTB chr1 76253289 + SNRNP70 chr19 49593547 + Exonic hg19 STAD TCGA-BR-A4CR 2 In-Frame Inter-chr p31.1 q13.33 12927 ChimerSeq FusionScan TCGA_RNA-Seq LCN15-CDC42BPG LCN15 chr9 139658844 - CDC42BPG chr11 64604002 - Exonic hg19 STAD TCGA-BR-A4CR 2 Out-of-Frame Inter-chr q34.3 q13.1 12928 ChimerSeq FusionScan TCGA_RNA-Seq ASAP1-VPS13B ASAP1 chr8 131370262 - VPS13B chr8 100821602 + Exonic hg19 STAD TCGA-BR-A4CR 2 In-Frame Intra-chr q24.22 q22.2 12929 ChimerSeq FusionScan TCGA_RNA-Seq FAM49B-PSKH2 FAM49B chr8 130874474 - PSKH2 chr8 87076858 - Exonic hg19 STAD TCGA-BR-A4CR 2 In-Frame Intra-chr q24.21 q21.3 CAMK:PSK Seq+ 12930 ChimerSeq FusionScan TCGA_RNA-Seq ARMC7-MRPS7 ARMC7 chr17 73106701 + MRPS7 chr17 73261782 + Exonic hg19 STAD TCGA-BR-A4CR 2 Out-of-Frame Intra-chr q25.1 q25.1 12931 ChimerSeq FusionScan TCGA_RNA-Seq VAV2-FARSB VAV2 chr9 136857196 - FARSB chr2 223484456 - Exonic hg19 STAD TCGA-HU-A4G2 3 In-Frame Inter-chr q34.2 q36.1 12932 ChimerSeq FusionScan TCGA_RNA-Seq C19orf79-STXBP2 C19orf79 chr19 7695732 + STXBP2 chr19 7703611 + Exonic hg19 STAD TCGA-HU-A4G2 2 Out-of-Frame Intra-chr p13.2 12933 ChimerSeq FusionScan TCGA_RNA-Seq MAP2-GTF2I MAP2 chr2 210489853 + GTF2I chr7 74125362 + Exonic hg19 STAD TCGA-HU-A4G2 2 5'UTR-CDS Inter-chr q34 q11.23 Transcription factor 12934 ChimerSeq FusionScan TCGA_RNA-Seq MFSD4-ATP1B1 MFSD4 chr1 205538427 + ATP1B1 chr1 169080607 + Exonic hg19 STAD TCGA-HU-A4G2 2 Out-of-Frame Intra-chr q24.2 12935 ChimerSeq FusionScan TCGA_RNA-Seq XRCC5-RPL37A XRCC5 chr2 216974180 + RPL37A chr2 217363992 + Exonic hg19 STAD TCGA-HU-A4G2 2 In-Frame Intra-chr q35 Tumor suppressor gene q35 Seq+ 12936 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-UBAP2 RCC1 chr1 28834672 + UBAP2 chr9 33948585 - Exonic hg19 STAD TCGA-HU-A4G2 2 5'UTR-CDS Inter-chr p35.3 p13.3 12937 ChimerSeq FusionScan TCGA_RNA-Seq ANK3-MGMT ANK3 chr10 62493020 - MGMT chr10 131506158 + Exonic hg19 STAD TCGA-HU-A4G2 2 Out-of-Frame Intra-chr q21.2 q26.3 12938 ChimerSeq FusionScan TCGA_RNA-Seq ARRDC2-DPYSL3 ARRDC2 chr19 18112382 + DPYSL3 chr5 146781259 - Exonic hg19 STAD TCGA-HU-A4G2 2 In-Frame Inter-chr p13.11 q32 12939 ChimerSeq FusionScan TCGA_RNA-Seq EGFL7-REV1 EGFL7 chr9 139559237 + REV1 chr2 100081447 - Exonic hg19 STAD TCGA-HU-A4G2 2 5'UTR-5'UTR Inter-chr q34.3 q11.2 12940 ChimerSeq FusionScan TCGA_RNA-Seq REV3L-ASCC3 REV3L chr6 111803952 - ASCC3 chr6 101253756 - Exonic hg19 STAD TCGA-HU-A4G2 2 Out-of-Frame Intra-chr q21 q16.3 12941 ChimerSeq FusionScan TCGA_RNA-Seq PCBP2-RUVBL2 PCBP2 chr12 53853187 + RUVBL2 chr19 49507533 + Exonic hg19 STAD TCGA-HU-A4G2 2 In-Frame Inter-chr q13.13 q13.33 12942 ChimerSeq FusionScan TCGA_RNA-Seq SNHG6-MYO6 SNHG6 chr8 67834848 - MYO6 chr6 76608089 + Exonic hg19 STAD TCGA-HU-A4G2 2 3'UTR-CDS Inter-chr q13.1 q14.1 12943 ChimerSeq FusionScan TCGA_RNA-Seq MYO1D-ACACA MYO1D chr17 31203795 - ACACA chr17 35506898 - Exonic hg19 STAD TCGA-BR-8679 2 Out-of-Frame Intra-chr q11.2 Seq+ 12944 ChimerSeq FusionScan TCGA_RNA-Seq NRIP1-SMAD6 NRIP1 chr21 16415815 - SMAD6 chr15 67004005 + Exonic hg19 STAD TCGA-BR-8679 2 5'UTR-5'UTR Inter-chr q21.1 q22.31 12945 ChimerSeq FusionScan TCGA_RNA-Seq PLCE1-WDR1 PLCE1 chr10 95892216 + WDR1 chr4 10105610 - Exonic hg19 STAD TCGA-BR-8679 2 Out-of-Frame Inter-chr q23.33 Tumor suppressor gene p16.1 12946 ChimerSeq FusionScan TCGA_RNA-Seq ARID1A-UBE2U ARID1A chr1 27059283 + UBE2U chr1 64686541 + Exonic hg19 STAD TCGA-BR-8679 2 Out-of-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p31.3 Seq+ 12947 ChimerSeq FusionScan TCGA_RNA-Seq C17orf62-SSBP4 C17orf62 chr17 80408575 - SSBP4 chr19 18538160 + Exonic hg19 STAD TCGA-BR-8679 2 5'UTR-CDS Inter-chr q25.3 p13.11 12948 ChimerSeq FusionScan TCGA_RNA-Seq ITGB1-TAX1BP1 ITGB1 chr10 33197295 - TAX1BP1 chr7 27867356 + Exonic hg19 STAD TCGA-BR-8679 2 In-Frame Inter-chr p11.22 Tumor suppressor gene p15.2 12949 ChimerSeq FusionScan TCGA_RNA-Seq RANBP3-RFX2 RANBP3 chr19 5978071 - RFX2 chr19 6026248 - Exonic hg19 STAD TCGA-BR-8679 2 Out-of-Frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 12950 ChimerSeq FusionScan TCGA_RNA-Seq NAA15-MGST2 NAA15 chr4 140222985 + MGST2 chr4 140661365 + Exonic hg19 STAD TCGA-BR-7715 8 CDS-3'UTR Intra-chr q31.1 q31.1 Seq+ 12951 ChimerSeq FusionScan TCGA_RNA-Seq SEPT11-FAM198B SEPT11 chr4 77917692 + FAM198B chr4 159052164 - Exonic hg19 STAD TCGA-BR-7715 8 Out-of-Frame Intra-chr q21.1 q32.1 Seq+ 12952 ChimerSeq FusionScan TCGA_RNA-Seq PIN4-HDAC8 PIN4 chrX 71416754 + HDAC8 chrX 71571688 - Exonic hg19 STAD TCGA-BR-7715 5 In-Frame Intra-chr q13.1 q13.1 Seq+ 12953 ChimerSeq FusionScan TCGA_RNA-Seq TM9SF4-TPX2 TM9SF4 chr20 30697558 + TPX2 chr20 30345209 + Exonic hg19 STAD TCGA-BR-7715 2 CDS-5'UTR Intra-chr q11.21 q11.21 Seq+ 12954 ChimerSeq FusionScan TCGA_RNA-Seq MICAL2-DKK3 MICAL2 chr11 12132273 + DKK3 chr11 12023984 - Exonic hg19 STAD TCGA-BR-7715 2 5'UTR-CDS Intra-chr p15.3 p15.3 Tumor suppressor gene 12955 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-PECAM1 GRB7 chr17 37894386 + PECAM1 chr17 62401205 - Exonic hg19 STAD TCGA-HU-A4HD 39 5'UTR-CDS Intra-chr q12 q23.3 Seq+ 12956 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-PECAM1 GRB7 chr17 37894386 + PECAM1 chr17 62407083 - Exonic hg19 STAD TCGA-HU-A4HD 25 5'UTR-5'UTR Intra-chr q12 q23.3 Seq+ 12957 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-PECAM1 GRB7 chr17 37894645 + PECAM1 chr17 62407083 - Exonic hg19 STAD TCGA-HU-A4HD 24 5'UTR-5'UTR Intra-chr q12 q23.3 Seq+ 12958 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-PECAM1 GRB7 chr17 37894645 + PECAM1 chr17 62401205 - Exonic hg19 STAD TCGA-HU-A4HD 15 5'UTR-CDS Intra-chr q12 q23.3 Seq+ 12959 ChimerSeq FusionScan TCGA_RNA-Seq HSPG2-MYBPHL HSPG2 chr1 22222414 - MYBPHL chr1 109836871 - Exonic hg19 STAD TCGA-HU-A4HD 12 In-Frame Intra-chr p36.12 p13.3 Seq+ 12960 ChimerSeq FusionScan TCGA_RNA-Seq SDC4-TP53TG5 SDC4 chr20 43976964 - TP53TG5 chr20 44006253 - Exonic hg19 STAD TCGA-HU-A4HD 12 In-Frame Intra-chr q13.12 q13.12 Seq+ 12961 ChimerSeq FusionScan TCGA_RNA-Seq PADI2-EXD3 PADI2 chr1 17422403 - EXD3 chr9 140218595 - Exonic hg19 STAD TCGA-HU-A4HD 11 In-Frame Inter-chr p36.13 q34.3 Seq+ 12962 ChimerSeq FusionScan TCGA_RNA-Seq PRKD2-MYH14 PRKD2 chr19 47207425 - MYH14 chr19 50747498 + Exonic hg19 STAD TCGA-HU-A4HD 11 In-Frame Intra-chr q13.32 q13.33 Seq+ 12963 ChimerSeq FusionScan TCGA_RNA-Seq TEX2-STARD3 TEX2 chr17 62270918 - STARD3 chr17 37813260 + Exonic hg19 STAD TCGA-HU-A4HD 10 Out-of-Frame Intra-chr q23.3 q12 Seq+ 12964 ChimerSeq FusionScan TCGA_RNA-Seq EIF4G3-C7orf50 EIF4G3 chr1 21377358 - C7orf50 chr7 1049779 - Exonic hg19 STAD TCGA-HU-A4HD 8 5'UTR-CDS Inter-chr p36.12 p22.3 Seq+ 12965 ChimerSeq FusionScan TCGA_RNA-Seq RHPN2-ZNF677 RHPN2 chr19 33535154 - ZNF677 chr19 53747150 - Exonic hg19 STAD TCGA-HU-A4HD 7 Out-of-Frame Intra-chr q13.11 q13.42 Transcription factor Seq+ 12966 ChimerSeq FusionScan TCGA_RNA-Seq GPATCH1-FCGRT GPATCH1 chr19 33610023 + FCGRT chr19 50027763 + Exonic hg19 STAD TCGA-HU-A4HD 6 In-Frame Intra-chr q13.11 q13.33 Seq+ 12967 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-PECAM1 GRB7 chr17 37896434 + PECAM1 chr17 62407083 - Exonic hg19 STAD TCGA-HU-A4HD 5 5'UTR-5'UTR Intra-chr q12 q23.3 Seq+ 12968 ChimerSeq FusionScan TCGA_RNA-Seq SMURF2-PUM2 SMURF2 chr17 62574609 - PUM2 chr2 20460227 - Exonic hg19 STAD TCGA-HU-A4HD 5 In-Frame Inter-chr q24.1 p24.1 Seq+ 12969 ChimerSeq FusionScan TCGA_RNA-Seq CCDC82-MTMR2 CCDC82 chr11 96104176 - MTMR2 chr11 95583913 - Exonic hg19 STAD TCGA-HU-A4HD 4 In-Frame Intra-chr q21 q21 Seq+ 12970 ChimerSeq FusionScan TCGA_RNA-Seq DIP2C-CIZ1 DIP2C chr10 735433 - CIZ1 chr9 130938754 - Exonic hg19 STAD TCGA-HU-A4HD 3 Out-of-Frame Inter-chr p15.3 q34.11 Tumor suppressor gene 12971 ChimerSeq FusionScan TCGA_RNA-Seq DAP3-CCT3 DAP3 chr1 155679615 + CCT3 chr1 156305679 - Exonic hg19 STAD TCGA-HU-A4HD 3 Out-of-Frame Intra-chr q22 q22 12972 ChimerSeq FusionScan TCGA_RNA-Seq EIF2C2-TRAPPC9 EIF2C2 chr8 141645583 - TRAPPC9 chr8 141461482 - Exonic hg19 STAD TCGA-HU-A4HD 2 Out-of-Frame Intra-chr q24.3 12973 ChimerSeq FusionScan TCGA_RNA-Seq C1orf172-NUDC C1orf172 chr1 27286840 - NUDC chr1 27267947 + Exonic hg19 STAD TCGA-HU-A4HD 2 5'UTR-CDS Intra-chr p36.11 12974 ChimerSeq FusionScan TCGA_RNA-Seq PKNOX1-CBS PKNOX1 chr21 44394774 + CBS chr21 44493451 - Exonic hg19 STAD TCGA-HU-A4HD 2 5'UTR-5'UTR Intra-chr q22.3 Tumor suppressor gene Transcription factor q22.3 12975 ChimerSeq FusionScan TCGA_RNA-Seq ZNF787-SHC1 ZNF787 chr19 56614507 - SHC1 chr1 154942675 - Exonic hg19 STAD TCGA-HU-A4HD 2 CDS-5'UTR Inter-chr q13.43 Transcription factor q21.3 12976 ChimerSeq FusionScan TCGA_RNA-Seq PEPD-NOSIP PEPD chr19 34001933 - NOSIP chr19 50060506 - Exonic hg19 STAD TCGA-HU-A4HD 2 Out-of-Frame Intra-chr q13.11 q13.33 12977 ChimerSeq FusionScan TCGA_RNA-Seq PADI2-EXD3 PADI2 chr1 17422403 - EXD3 chr9 140218308 - Exonic hg19 STAD TCGA-HU-A4HD 2 In-Frame Inter-chr p36.13 q34.3 Seq+ 12978 ChimerSeq FusionScan TCGA_RNA-Seq CRHR1-GNAS CRHR1 chr17 43699407 + GNAS chr20 57470666 + Exonic hg19 STAD TCGA-HU-A4HD 2 5'UTR-5'UTR Inter-chr q21.31 q13.32 Oncogene 12979 ChimerSeq FusionScan TCGA_RNA-Seq LRBA-ZNF704 LRBA chr4 151935578 - ZNF704 chr8 81605342 - Exonic hg19 STAD TCGA-HU-A4HD 2 Out-of-Frame Inter-chr q31.3 q21.13 Transcription factor 12980 ChimerSeq FusionScan TCGA_RNA-Seq NCF1-GTF2IRD1 NCF1 chr7 74193768 + GTF2IRD1 chr7 73922404 + Exonic hg19 STAD TCGA-HU-A4HD 2 CDS-5'UTR Intra-chr q11.23 q11.23 Transcription factor 12981 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-PECAM1 GRB7 chr17 37895177 + PECAM1 chr17 62407083 - Exonic hg19 STAD TCGA-HU-A4HD 2 CDS-5'UTR Intra-chr q12 q23.3 Seq+ 12982 ChimerSeq FusionScan TCGA_RNA-Seq ZNF7-EIF4A1 ZNF7 chr8 146062892 + EIF4A1 chr17 7480373 + Exonic hg19 STAD TCGA-HU-A4HD 2 In-Frame Inter-chr q24.3 Transcription factor p13.1 12983 ChimerSeq FusionScan TCGA_RNA-Seq SRSF6-L3MBTL1 SRSF6 chr20 42089238 + L3MBTL1 chr20 42157296 + Exonic hg19 STAD TCGA-HU-A4HD 2 Out-of-Frame Intra-chr q13.11 q13.12 Transcription factor 12984 ChimerSeq FusionScan TCGA_RNA-Seq PRR15L-CBX1 PRR15L chr17 46035022 - CBX1 chr17 46154403 - Exonic hg19 STAD TCGA-BR-8286 6 5'UTR-5'UTR Intra-chr q21.32 q21.32 Seq+ 12985 ChimerSeq FusionScan TCGA_RNA-Seq RBBP8-TAF4B RBBP8 chr18 20581692 + TAF4B chr18 23865845 + Exonic hg19 STAD TCGA-BR-8286 3 Out-of-Frame Intra-chr q11.2 Tumor suppressor gene q11.2 Seq+ 12986 ChimerSeq FusionScan TCGA_RNA-Seq IL33-UHRF2 IL33 chr9 6215852 + UHRF2 chr9 6420911 + Exonic hg19 STAD TCGA-BR-8286 2 5'UTR-5'UTR Intra-chr p24.1 p24.1 Tumor suppressor gene 12987 ChimerSeq FusionScan TCGA_RNA-Seq TMEM230-UBAP2 TMEM230 chr20 5086833 - UBAP2 chr9 33956144 - Exonic hg19 STAD TCGA-BR-8286 2 In-Frame Inter-chr p12.3 p13.3 12988 ChimerSeq FusionScan TCGA_RNA-Seq TEX30-RPN1 TEX30 chr13 103426031 - RPN1 chr3 128345675 - Exonic hg19 STAD TCGA-BR-8286 2 5'UTR-CDS Inter-chr q33.1 q21.3 12989 ChimerSeq FusionScan TCGA_RNA-Seq SARNP-ATF1 SARNP chr12 56182858 - ATF1 chr12 51189691 + Exonic hg19 STAD TCGA-BR-8286 2 In-Frame Intra-chr q13.2 q13.12 Oncogene Transcription factor 12990 ChimerSeq FusionScan TCGA_RNA-Seq C22orf28-FBXO7 C22orf28 chr22 32804161 - FBXO7 chr22 32891479 + Exonic hg19 STAD TCGA-BR-8286 2 Out-of-Frame Intra-chr q12.3 12991 ChimerSeq FusionScan TCGA_RNA-Seq NUP133-RHOT1 NUP133 chr1 229641786 - RHOT1 chr17 30509775 + Exonic hg19 STAD TCGA-BR-8286 2 Out-of-Frame Inter-chr q42.13 q11.2 12992 ChimerSeq FusionScan TCGA_RNA-Seq PDSS1-ABI1 PDSS1 chr10 27031506 + ABI1 chr10 27059274 - Exonic hg19 STAD TCGA-BR-8286 2 In-Frame Intra-chr p12.1 p12.1 12993 ChimerSeq FusionScan TCGA_RNA-Seq DEPDC1B-FAM108C1 DEPDC1B chr5 59982788 - FAM108C1 chr15 81041853 + Exonic hg19 STAD TCGA-BR-8286 2 In-Frame Inter-chr q12.1 12994 ChimerSeq FusionScan TCGA_RNA-Seq ACOX1-PRKCA ACOX1 chr17 73974614 - PRKCA chr17 64799990 + Exonic hg19 STAD TCGA-BR-8286 2 Out-of-Frame Intra-chr q25.1 q24.2 12995 ChimerSeq FusionScan TCGA_RNA-Seq ANKS3-GLYR1 ANKS3 chr16 4779980 - GLYR1 chr16 4882913 - Exonic hg19 STAD TCGA-BR-8286 2 In-Frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 12996 ChimerSeq FusionScan TCGA_RNA-Seq ECHDC2-CYSTM1 ECHDC2 chr1 53387224 - CYSTM1 chr5 139622889 + Exonic hg19 STAD TCGA-CG-5734 2 In-Frame Inter-chr p32.3 q31.3 12997 ChimerSeq FusionScan TCGA_RNA-Seq PLS1-ATP1A1 PLS1 chr3 142315351 + ATP1A1 chr1 116926635 + Exonic hg19 STAD TCGA-CG-5734 2 5'UTR-5'UTR Inter-chr q23 p13.1 12998 ChimerSeq FusionScan TCGA_RNA-Seq C1orf86-DYM C1orf86 chr1 2125077 - DYM chr18 46570574 - Exonic hg19 STAD TCGA-CG-5734 2 Out-of-Frame Inter-chr q21.1 12999 ChimerSeq FusionScan TCGA_RNA-Seq SMAGP-POU6F1 SMAGP chr12 51663028 - POU6F1 chr12 51598151 - Exonic hg19 STAD TCGA-CG-5734 2 CDS-3'UTR Intra-chr q13.13 q13.13 Transcription factor 13000 ChimerSeq FusionScan TCGA_RNA-Seq TRAPPC12-RNF149 TRAPPC12 chr2 3405664 + RNF149 chr2 101898519 - Exonic hg19 STAD TCGA-CG-5734 2 In-Frame Intra-chr q11.2 13001 ChimerSeq FusionScan TCGA_RNA-Seq PDE4D-TBCA PDE4D chr5 59783768 - TBCA chr5 77004172 - Exonic hg19 STAD TCGA-CG-5734 2 5'UTR-CDS Intra-chr q12.1 q14.1 13002 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHA5-AEBP2 PLEKHA5 chr12 19440490 + AEBP2 chr12 19646733 + Exonic hg19 STAD TCGA-VQ-A8P5 4 In-Frame Intra-chr p12.3 p12.3 Transcription factor Seq+ 13003 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHA5-AEBP2 PLEKHA5 chr12 19436679 + AEBP2 chr12 19646733 + Exonic hg19 STAD TCGA-VQ-A8P5 3 In-Frame Intra-chr p12.3 p12.3 Transcription factor Seq+ 13004 ChimerSeq FusionScan TCGA_RNA-Seq ZNF124-PERP ZNF124 chr1 247335149 - PERP chr6 138417631 - Exonic hg19 STAD TCGA-VQ-A8P5 2 Out-of-Frame Inter-chr q44 Transcription factor q23.3 13005 ChimerSeq FusionScan TCGA_RNA-Seq EHMT2-CRB1 EHMT2 chr6 31854357 - CRB1 chr1 197297551 + Exonic hg19 STAD TCGA-VQ-A8P5 2 Out-of-Frame Inter-chr q31.3 Seq+ 13006 ChimerSeq FusionScan TCGA_RNA-Seq SETD2-RNF216 SETD2 chr3 47125209 - RNF216 chr7 5756397 - Exonic hg19 STAD TCGA-FP-8210 2 In-Frame Inter-chr p21.31 Oncogene Tumor suppressor gene p22.1 Seq+ 13007 ChimerSeq FusionScan TCGA_RNA-Seq SORBS1-TXNL4A SORBS1 chr10 97321076 - TXNL4A chr18 77737701 - Exonic hg19 STAD TCGA-FP-8210 2 5'UTR-CDS Inter-chr q24.1 q23 13008 ChimerSeq FusionScan TCGA_RNA-Seq CARS-UBC CARS chr11 3078572 - UBC chr12 125398320 - Exonic hg19 STAD TCGA-FP-8210 2 CDS-5'UTR Inter-chr q24.31 Seq+ 13009 ChimerSeq FusionScan TCGA_RNA-Seq DDIT4-RASGRF2 DDIT4 chr10 74033818 + RASGRF2 chr5 80388619 + Exonic hg19 STAD TCGA-FP-8210 2 5'UTR-CDS Inter-chr q22.1 q14.1 Seq+ 13010 ChimerSeq FusionScan TCGA_RNA-Seq PDE3B-RHOH PDE3B chr11 14666599 + RHOH chr4 40244333 + Exonic hg19 STAD TCGA-FP-8210 2 CDS-5'UTR Inter-chr p15.2 p14 Oncogene Seq+ 13011 ChimerSeq FusionScan TCGA_RNA-Seq SFMBT2-TBCD SFMBT2 chr10 7409610 - TBCD chr17 80828099 + Exonic hg19 STAD TCGA-FP-8210 2 In-Frame Inter-chr p14 Seq+ 13012 ChimerSeq FusionScan TCGA_RNA-Seq PHF17-LARP1B PHF17 chr4 129752965 + LARP1B chr4 129083348 + Exonic hg19 STAD TCGA-KB-A6F7 10 Out-of-Frame Intra-chr q28.2 Seq+ 13013 ChimerSeq FusionScan TCGA_RNA-Seq PHF17-LARP1B PHF17 chr4 129752965 + LARP1B chr4 129100560 + Exonic hg19 STAD TCGA-KB-A6F7 2 Out-of-Frame Intra-chr q28.2 Seq+ 13014 ChimerSeq FusionScan TCGA_RNA-Seq JARID2-TTC35 JARID2 chr6 15374483 + TTC35 chr8 109462051 + Exonic hg19 STAD TCGA-KB-A6F7 2 In-Frame Inter-chr p22.3 13015 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD10-ING1 ANKRD10 chr13 111567071 - ING1 chr13 111371575 + Exonic hg19 STAD TCGA-KB-A6F7 2 Out-of-Frame Intra-chr q34 q34 Tumor suppressor gene 13016 ChimerSeq FusionScan TCGA_RNA-Seq ELP2-RPRD1A ELP2 chr18 33736617 + RPRD1A chr18 33573263 - Exonic hg19 STAD TCGA-KB-A6F7 2 In-Frame Intra-chr q12.2 q12.2 Seq+ 13017 ChimerSeq FusionScan TCGA_RNA-Seq WDPCP-SPTBN1 WDPCP chr2 63815330 - SPTBN1 chr2 54753508 + Exonic hg19 STAD TCGA-KB-A6F7 2 CDS-5'UTR Intra-chr p15 p16.2 Tumor suppressor gene 13018 ChimerSeq FusionScan TCGA_RNA-Seq RNF10-PSMB4 RNF10 chr12 121000873 + PSMB4 chr1 151373714 + Exonic hg19 STAD TCGA-KB-A6F7 2 In-Frame Inter-chr q24.31 q21.3 13019 ChimerSeq FusionScan TCGA_RNA-Seq PHF17-LARP1B PHF17 chr4 129752965 + LARP1B chr4 129099585 + Exonic hg19 STAD TCGA-KB-A6F7 2 In-Frame Intra-chr q28.2 Seq+ 13020 ChimerSeq FusionScan TCGA_RNA-Seq PRKACB-MARK2 PRKACB chr1 84610231 + MARK2 chr11 63662630 + Exonic hg19 STAD TCGA-KB-A6F7 2 Out-of-Frame Inter-chr p31.1 q13.1 CAMK:CAMKL 13021 ChimerSeq FusionScan TCGA_RNA-Seq CLSTN2-FSD1L CLSTN2 chr3 139894915 + FSD1L chr9 108268679 + Exonic hg19 STAD TCGA-KB-A6F7 2 In-Frame Inter-chr q23 q31.2 13022 ChimerSeq FusionScan TCGA_RNA-Seq GALNT2-COG2 GALNT2 chr1 230314057 + COG2 chr1 230795209 + Exonic hg19 STAD TCGA-KB-A6F7 2 Out-of-Frame Intra-chr q42.13 q42.2 13023 ChimerSeq FusionScan TCGA_RNA-Seq CDC6-JUP CDC6 chr17 38457860 + JUP chr17 39914036 - Exonic hg19 STAD TCGA-EQ-8122 55 3'UTR-CDS Intra-chr q21.2 q21.2 Tumor suppressor gene Seq+ 13024 ChimerSeq FusionScan TCGA_RNA-Seq PRR11-SKA2 PRR11 chr17 57233166 + SKA2 chr17 57208728 - Exonic hg19 STAD TCGA-EQ-8122 11 5'UTR-CDS Intra-chr q22 q22 Seq+ 13025 ChimerSeq FusionScan TCGA_RNA-Seq RARA-JUP RARA chr17 38465538 + JUP chr17 39923832 - Exonic hg19 STAD TCGA-EQ-8122 8 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q21.2 Tumor suppressor gene 13026 ChimerSeq FusionScan TCGA_RNA-Seq CDC6-JUP CDC6 chr17 38457282 + JUP chr17 39914036 - Exonic hg19 STAD TCGA-EQ-8122 6 3'UTR-CDS Intra-chr q21.2 q21.2 Tumor suppressor gene Seq+ 13027 ChimerSeq FusionScan TCGA_RNA-Seq HAP1-CDC6 HAP1 chr17 39887744 - CDC6 chr17 38445659 + Exonic hg19 STAD TCGA-EQ-8122 5 CDS-3'UTR Intra-chr q21.2 q21.2 Seq+ 13028 ChimerSeq FusionScan TCGA_RNA-Seq JUP-WIPF2 JUP chr17 39914650 - WIPF2 chr17 38433334 + Exonic hg19 STAD TCGA-EQ-8122 5 Out-of-Frame Intra-chr q21.2 Tumor suppressor gene q21.2 13029 ChimerSeq FusionScan TCGA_RNA-Seq STARD3-MIEN1 STARD3 chr17 37810003 + MIEN1 chr17 37886544 - Exonic hg19 STAD TCGA-EQ-8122 4 Out-of-Frame Intra-chr q12 q12 Seq+ 13030 ChimerSeq FusionScan TCGA_RNA-Seq EHBP1-CTNND2 EHBP1 chr2 62934430 + CTNND2 chr5 11732384 - Exonic hg19 STAD TCGA-EQ-8122 4 Out-of-Frame Inter-chr p15 p15.2 Seq+ 13031 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-WIPF2 GRB7 chr17 37902455 + WIPF2 chr17 38420741 + Exonic hg19 STAD TCGA-EQ-8122 3 Out-of-Frame Intra-chr q12 q21.2 Seq+ 13032 ChimerSeq FusionScan TCGA_RNA-Seq WIPF2-JUP WIPF2 chr17 38430251 + JUP chr17 39923832 - Exonic hg19 STAD TCGA-EQ-8122 2 Out-of-Frame Intra-chr q21.2 q21.2 Tumor suppressor gene 13033 ChimerSeq FusionScan TCGA_RNA-Seq MAN2B1-EVI5L MAN2B1 chr19 12774130 - EVI5L chr19 7913806 + Exonic hg19 STAD TCGA-EQ-8122 2 In-Frame Intra-chr p13.13 p13.2 Seq+ 13034 ChimerSeq FusionScan TCGA_RNA-Seq MAP3K13-PLXND1 MAP3K13 chr3 185000815 + PLXND1 chr3 129286648 - Exonic hg19 STAD TCGA-EQ-8122 2 5'UTR-CDS Intra-chr q27.2 q22.1 Seq+ 13035 ChimerSeq FusionScan TCGA_RNA-Seq FAM134C-EPN2 FAM134C chr17 40761103 - EPN2 chr17 19185267 + Exonic hg19 STAD TCGA-EQ-8122 2 CDS-5'UTR Intra-chr p11.2 13036 ChimerSeq FusionScan TCGA_RNA-Seq MIB2-ERBB2 MIB2 chr1 1551994 + ERBB2 chr17 37863242 + Exonic hg19 STAD TCGA-EQ-8122 2 Out-of-Frame Inter-chr p36.33 q12 Oncogene 13037 ChimerSeq FusionScan TCGA_RNA-Seq GUK1-ARF1 GUK1 chr1 228328064 + ARF1 chr1 228284778 + Exonic hg19 STAD TCGA-EQ-8122 2 5'UTR-5'UTR Intra-chr q42.13 q42.13 Tumor suppressor gene Seq+ 13038 ChimerSeq FusionScan TCGA_RNA-Seq ABR-PPP1R12C ABR chr17 1082960 - PPP1R12C chr19 55607703 - Exonic hg19 STAD TCGA-EQ-8122 2 Out-of-Frame Inter-chr p13.3 q13.42 13039 ChimerSeq FusionScan TCGA_RNA-Seq RAD50-BCLAF1 RAD50 chr5 131895059 + BCLAF1 chr6 136582615 - Exonic hg19 STAD TCGA-EQ-8122 2 In-Frame Inter-chr q31.1 Oncogene q23.3 13040 ChimerSeq FusionScan TCGA_RNA-Seq MIEN1-KRT26 MIEN1 chr17 37885937 - KRT26 chr17 38923905 - Exonic hg19 STAD TCGA-EQ-8122 2 Out-of-Frame Intra-chr q12 q21.2 Seq+ 13041 ChimerSeq FusionScan TCGA_RNA-Seq CMBL-MDN1 CMBL chr5 10286465 - MDN1 chr6 90372686 - Exonic hg19 STAD TCGA-EQ-8122 2 In-Frame Inter-chr p15.2 q15 13042 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-ATP5C1 CPSF6 chr12 69650622 + ATP5C1 chr10 7844720 + Exonic hg19 STAD TCGA-EQ-8122 2 In-Frame Inter-chr q15 p14 13043 ChimerSeq FusionScan TCGA_RNA-Seq SBNO2-PTBP1 SBNO2 chr19 1174170 - PTBP1 chr19 803560 + Exonic hg19 STAD TCGA-EQ-8122 2 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 13044 ChimerSeq FusionScan TCGA_RNA-Seq COG3-NUFIP1 COG3 chr13 46039345 + NUFIP1 chr13 45540071 - Exonic hg19 STAD TCGA-EQ-8122 2 Out-of-Frame Intra-chr q14.13 q14.12 13045 ChimerSeq FusionScan TCGA_RNA-Seq TMX2-CTNND1 TMX2 chr11 57505140 + CTNND1 chr11 57558856 + Exonic hg19 STAD TCGA-EQ-8122 2 5'UTR-5'UTR Intra-chr q12.1 q12.1 Tumor suppressor gene 13046 ChimerSeq FusionScan TCGA_RNA-Seq TOB2-MKL1 TOB2 chr22 41842382 - MKL1 chr22 40807911 - Exonic hg19 STAD TCGA-CG-5717 3 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 13047 ChimerSeq FusionScan TCGA_RNA-Seq COPS7B-IMPA2 COPS7B chr2 232653442 + IMPA2 chr18 12014263 + Exonic hg19 STAD TCGA-CG-5717 2 In-Frame Inter-chr q37.1 p11.21 Seq+ 13048 ChimerSeq FusionScan TCGA_RNA-Seq FOXN3-MYO9B FOXN3 chr14 89878277 - MYO9B chr19 17291735 + Exonic hg19 STAD TCGA-CG-5717 2 Out-of-Frame Inter-chr q32.11 Transcription factor p13.11 13049 ChimerSeq FusionScan TCGA_RNA-Seq DSC2-KRT4 DSC2 chr18 28648859 - KRT4 chr12 53202203 - Exonic hg19 STAD TCGA-CG-5717 2 In-Frame Inter-chr q12.1 Tumor suppressor gene q13.13 13050 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992064 + VMP1 chr17 57915655 + Exonic hg19 STAD TCGA-CG-5717 2 Out-of-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 13051 ChimerSeq FusionScan TCGA_RNA-Seq FAF1-PRDX6 FAF1 chr1 51032748 - PRDX6 chr1 173450464 + Exonic hg19 STAD TCGA-CG-5717 2 In-Frame Intra-chr p32.3 q25.1 13052 ChimerSeq FusionScan TCGA_RNA-Seq NAB1-TRAPPC12 NAB1 chr2 191514708 + TRAPPC12 chr2 3482616 + Exonic hg19 STAD TCGA-3M-AB47 2 5'UTR-CDS Intra-chr q32.2 13053 ChimerSeq FusionScan TCGA_RNA-Seq PITPNC1-EBAG9 PITPNC1 chr17 65628354 + EBAG9 chr8 110573066 + Exonic hg19 STAD TCGA-3M-AB47 2 In-Frame Inter-chr q24.2 q23.2 13054 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS4-MRPL3 TMPRSS4 chr11 117988169 + MRPL3 chr3 131190123 - Exonic hg19 STAD TCGA-3M-AB47 2 Out-of-Frame Inter-chr q23.3 q22.1 13055 ChimerSeq FusionScan TCGA_RNA-Seq TDRD3-TSC22D1 TDRD3 chr13 61109367 + TSC22D1 chr13 45010231 - Exonic hg19 STAD TCGA-3M-AB47 2 Out-of-Frame Intra-chr q21.2 q14.11 Tumor suppressor gene Transcription factor 13056 ChimerSeq FusionScan TCGA_RNA-Seq TFRC-FYTTD1 TFRC chr3 195808913 - FYTTD1 chr3 197483296 + Exonic hg19 STAD TCGA-SW-A7EA 2 5'UTR-5'UTR Intra-chr q29 q29 13057 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1211-GNAS KIAA1211 chr4 57045596 + GNAS chr20 57480437 + Exonic hg19 STAD TCGA-SW-A7EA 2 5'UTR-5'UTR Inter-chr q12 q13.32 Oncogene 13058 ChimerSeq FusionScan TCGA_RNA-Seq PPP6R1-EPS8L1 PPP6R1 chr19 55750772 - EPS8L1 chr19 55597208 + Exonic hg19 STAD TCGA-SW-A7EA 2 In-Frame Intra-chr q13.42 q13.42 13059 ChimerSeq FusionScan TCGA_RNA-Seq PABPC1-GRSF1 PABPC1 chr8 101730000 - GRSF1 chr4 71691148 - Exonic hg19 STAD TCGA-SW-A7EA 2 Out-of-Frame Inter-chr q22.3 q13.3 13060 ChimerSeq FusionScan TCGA_RNA-Seq EIF2C3-PSMB2 EIF2C3 chr1 36397046 + PSMB2 chr1 36075009 - Exonic hg19 STAD TCGA-SW-A7EA 2 Out-of-Frame Intra-chr p34.3 13061 ChimerSeq FusionScan TCGA_RNA-Seq FUBP1-USP33 FUBP1 chr1 78428454 - USP33 chr1 78167156 - Exonic hg19 STAD TCGA-VQ-A94O 20 In-Frame Intra-chr p31.1 Oncogene p31.1 Tumor suppressor gene Seq+ 13062 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-RSBN1L PTPN12 chr7 77166962 + RSBN1L chr7 77365726 + Exonic hg19 STAD TCGA-VQ-A94O 8 Out-of-Frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 13063 ChimerSeq FusionScan TCGA_RNA-Seq URI1-EIF3H URI1 chr19 30433571 + EIF3H chr8 117671219 - Exonic hg19 STAD TCGA-VQ-A94O 6 Out-of-Frame Inter-chr q12 q24.11 Seq+ 13064 ChimerSeq FusionScan TCGA_RNA-Seq COG4-AARS COG4 chr16 70530168 - AARS chr16 70311057 - Exonic hg19 STAD TCGA-VQ-A94O 5 In-Frame Intra-chr q22.1 q22.1 Seq+ 13065 ChimerSeq FusionScan TCGA_RNA-Seq URI1-EIF3H URI1 chr19 30433571 + EIF3H chr8 117668244 - Exonic hg19 STAD TCGA-VQ-A94O 5 Out-of-Frame Inter-chr q12 q24.11 Seq+ 13066 ChimerSeq FusionScan TCGA_RNA-Seq EIF3H-URI1 EIF3H chr8 117738254 - URI1 chr19 30476129 + Exonic hg19 STAD TCGA-VQ-A94O 3 Out-of-Frame Inter-chr q24.11 q12 Seq+ 13067 ChimerSeq FusionScan TCGA_RNA-Seq HDAC4-CUL3 HDAC4 chr2 240048151 - CUL3 chr2 225422573 - Exonic hg19 STAD TCGA-VQ-A94O 2 In-Frame Intra-chr q37.3 q36.2 13068 ChimerSeq FusionScan TCGA_RNA-Seq STARD3-JUP STARD3 chr17 37793484 + JUP chr17 39928114 - Exonic hg19 STAD TCGA-VQ-A91S 59 5'UTR-5'UTR Intra-chr q12 q21.2 Tumor suppressor gene Seq+ 13069 ChimerSeq FusionScan TCGA_RNA-Seq MED15-FKBP10 MED15 chr22 20891491 + FKBP10 chr17 39977905 + Exonic hg19 STAD TCGA-VQ-A91S 37 Out-of-Frame Inter-chr q11.21 q21.2 Seq+ 13070 ChimerSeq FusionScan TCGA_RNA-Seq DSG2-TTR DSG2 chr18 29078259 + TTR chr18 29172858 + Exonic hg19 STAD TCGA-VQ-A91S 13 In-Frame Intra-chr q12.1 q12.1 Seq+ 13071 ChimerSeq FusionScan TCGA_RNA-Seq HNF4A-TTPAL HNF4A chr20 42984493 + TTPAL chr20 43108624 + Exonic hg19 STAD TCGA-VQ-A91S 5 CDS-5'UTR Intra-chr q13.12 Tumor suppressor gene Transcription factor q13.12 Seq+ 13072 ChimerSeq FusionScan TCGA_RNA-Seq MED15-FKBP10 MED15 chr22 20891491 + FKBP10 chr17 39977198 + Exonic hg19 STAD TCGA-VQ-A91S 4 Out-of-Frame Inter-chr q11.21 q21.2 Seq+ 13073 ChimerSeq FusionScan TCGA_RNA-Seq NPHP4-FAM71B NPHP4 chr1 6007163 - FAM71B chr5 156590669 - Exonic hg19 STAD TCGA-VQ-A91S 4 In-Frame Inter-chr p36.31 q33.3 Seq+ 13074 ChimerSeq FusionScan TCGA_RNA-Seq CEP44-SPTAN1 CEP44 chr4 175223337 + SPTAN1 chr9 131353755 + Exonic hg19 STAD TCGA-VQ-A91S 3 In-Frame Inter-chr q34.1 q34.11 Seq+ 13075 ChimerSeq FusionScan TCGA_RNA-Seq SDCBP2-NGFR SDCBP2 chr20 1298961 - NGFR chr17 47579424 + Exonic hg19 STAD TCGA-VQ-A91S 3 In-Frame Inter-chr p13 q21.33 Tumor suppressor gene Seq+ 13076 ChimerSeq FusionScan TCGA_RNA-Seq MED15-FKBP10 MED15 chr22 20862033 + FKBP10 chr17 39977905 + Exonic hg19 STAD TCGA-VQ-A91S 2 Out-of-Frame Inter-chr q11.21 q21.2 Seq+ 13077 ChimerSeq FusionScan TCGA_RNA-Seq ST6GALNAC3-TRIT1 ST6GALNAC3 chr1 76878102 + TRIT1 chr1 40315933 - Exonic hg19 STAD TCGA-VQ-A91S 2 In-Frame Intra-chr p31.1 p34.2 Tumor suppressor gene 13078 ChimerSeq FusionScan TCGA_RNA-Seq INTS4-KCTD21 INTS4 chr11 77690041 - KCTD21 chr11 77885629 - Exonic hg19 STAD TCGA-CD-8530 4 CDS-5'UTR Intra-chr q14.1 q14.1 Seq+ 13079 ChimerSeq FusionScan TCGA_RNA-Seq MAGED1-IL26 MAGED1 chrX 51546213 + IL26 chr12 68595863 - Exonic hg19 STAD TCGA-CD-8530 2 5'UTR-CDS Inter-chr p11.22 q15 Seq+ 13080 ChimerSeq FusionScan TCGA_RNA-Seq GOSR1-TCF4 GOSR1 chr17 28804482 + TCF4 chr18 52896307 - Exonic hg19 STAD TCGA-CD-8530 2 Out-of-Frame Inter-chr q11.2 q21.2 Tumor suppressor gene Transcription factor 13081 ChimerSeq FusionScan TCGA_RNA-Seq SBF2-ATP10A SBF2 chr11 9875086 - ATP10A chr15 25967056 - Exonic hg19 STAD TCGA-CD-8530 2 Out-of-Frame Inter-chr p15.4 q12 Seq+ 13082 ChimerSeq FusionScan TCGA_RNA-Seq CXorf57-NUP62CL CXorf57 chrX 105855953 + NUP62CL chrX 106418423 - Exonic hg19 STAD TCGA-CD-8530 2 CDS-5'UTR Intra-chr q22.3 q22.3 Seq+ 13083 ChimerSeq FusionScan TCGA_RNA-Seq MMP2-DYNC1LI2 MMP2 chr16 55536800 + DYNC1LI2 chr16 66770147 - Exonic hg19 STAD TCGA-CD-8530 2 In-Frame Intra-chr q12.2 Oncogene q22.1 13084 ChimerSeq FusionScan TCGA_RNA-Seq FAM126B-VPS35 FAM126B chr2 201936332 - VPS35 chr16 46711310 - Exonic hg19 STAD TCGA-CD-8530 2 5'UTR-CDS Inter-chr q33.1 q11.2 Seq+ 13085 ChimerSeq FusionScan TCGA_RNA-Seq SMUG1-PCBP2 SMUG1 chr12 54581602 - PCBP2 chr12 53849668 + Exonic hg19 STAD TCGA-CD-8530 2 5'UTR-CDS Intra-chr q13.13 Oncogene q13.13 13086 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 STAD TCGA-CD-8530 2 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 13087 ChimerSeq FusionScan TCGA_RNA-Seq PPM1F-EEF1D PPM1F chr22 22307163 - EEF1D chr8 144669022 - Exonic hg19 STAD TCGA-CD-8530 2 5'UTR-5'UTR Inter-chr q11.22 13088 ChimerSeq FusionScan TCGA_RNA-Seq GFPT1-GATA6 GFPT1 chr2 69585460 - GATA6 chr18 19780618 + Exonic hg19 STAD TCGA-IN-AB1V 3 In-Frame Inter-chr p13.3 q11.2 Transcription factor 13089 ChimerSeq FusionScan TCGA_RNA-Seq YWHAE-GOLM1 YWHAE chr17 1303340 - GOLM1 chr9 88694256 - Exonic hg19 STAD TCGA-IN-AB1V 3 CDS-5'UTR Inter-chr p13.3 q21.33 13090 ChimerSeq FusionScan TCGA_RNA-Seq CAPN5-ACER3 CAPN5 chr11 76778141 + ACER3 chr11 76687332 + Exonic hg19 STAD TCGA-IN-AB1V 2 5'UTR-CDS Intra-chr q13.5 q13.5 13091 ChimerSeq FusionScan TCGA_RNA-Seq PNPLA7-EHMT1 PNPLA7 chr9 140435093 - EHMT1 chr9 140728800 + Exonic hg19 STAD TCGA-KB-A93G 2 In-Frame Intra-chr q34.3 q34.3 13092 ChimerSeq FusionScan TCGA_RNA-Seq FKBP10-KRT40 FKBP10 chr17 39969531 + KRT40 chr17 39138715 - Exonic hg19 STAD TCGA-CG-4466 4 In-Frame Intra-chr q21.2 Seq+ 13093 ChimerSeq FusionScan TCGA_RNA-Seq LSR-POLB LSR chr19 35741562 + POLB chr8 42229080 + Exonic hg19 STAD TCGA-CG-4466 2 In-Frame Inter-chr q13.12 p11.21 13094 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-KRT222 GRB7 chr17 37894645 + KRT222 chr17 38816459 - Exonic hg19 STAD TCGA-CG-4466 2 5'UTR-CDS Intra-chr q12 q21.2 Seq+ 13095 ChimerSeq FusionScan TCGA_RNA-Seq FKBP10-KRT40 FKBP10 chr17 39969531 + KRT40 chr17 39140526 - Exonic hg19 STAD TCGA-CG-4466 2 CDS-5'UTR Intra-chr q21.2 Seq+ 13096 ChimerSeq FusionScan TCGA_RNA-Seq CDK11B-SP1 CDK11B chr1 1572442 - SP1 chr12 53775442 + Exonic hg19 STAD TCGA-VQ-A8P8 2 Out-of-Frame Inter-chr p36.33 q13.13 Transcription factor 13097 ChimerSeq FusionScan TCGA_RNA-Seq FAM3D-EFHD2 FAM3D chr3 58652302 - EFHD2 chr1 15752366 + Exonic hg19 STAD TCGA-CG-5719 9 5'UTR-CDS Inter-chr p14.2 p36.21 Seq+ 13098 ChimerSeq FusionScan TCGA_RNA-Seq RPS27A-PARP9 RPS27A chr2 55462098 + PARP9 chr3 122255189 - Exonic hg19 STAD TCGA-CG-5719 2 In-Frame Inter-chr p16.1 q21.1 13099 ChimerSeq FusionScan TCGA_RNA-Seq MCAT-ACSS2 MCAT chr22 43537167 - ACSS2 chr20 33513500 + Exonic hg19 STAD TCGA-CG-5719 2 In-Frame Inter-chr q13.2 q11.22 13100 ChimerSeq FusionScan TCGA_RNA-Seq MADD-TH1L MADD chr11 47304520 + TH1L chr20 57565964 + Exonic hg19 STAD TCGA-CG-5719 2 In-Frame Inter-chr p11.2 Tumor suppressor gene 13101 ChimerSeq FusionScan TCGA_RNA-Seq PSMC3-SAMD1 PSMC3 chr11 47440666 - SAMD1 chr19 14201232 - Exonic hg19 STAD TCGA-CG-5719 2 CDS-5'UTR Inter-chr p11.2 p13.12 13102 ChimerSeq FusionScan TCGA_RNA-Seq FTSJD1-U2AF1 FTSJD1 chr16 71322780 - U2AF1 chr21 44514898 - Exonic hg19 STAD TCGA-CG-5719 2 5'UTR-CDS Inter-chr q22.3 Oncogene 13103 ChimerSeq FusionScan TCGA_RNA-Seq DOT1L-PPP6R1 DOT1L chr19 2164264 + PPP6R1 chr19 55758477 - Exonic hg19 STAD TCGA-BR-8589 2 CDS-5'UTR Intra-chr p13.3 Oncogene Transcription factor q13.42 13104 ChimerSeq FusionScan TCGA_RNA-Seq FBXL8-RBBP7 FBXL8 chr16 67195840 + RBBP7 chrX 16864061 - Exonic hg19 STAD TCGA-BR-8589 2 Out-of-Frame Inter-chr q22.1 p22.2 Tumor suppressor gene 13105 ChimerSeq FusionScan TCGA_RNA-Seq PROX1-SP1 PROX1 chr1 214178615 + SP1 chr12 53775442 + Exonic hg19 STAD TCGA-BR-8589 2 Out-of-Frame Inter-chr q32.3 Tumor suppressor gene Transcription factor q13.13 Transcription factor 13106 ChimerSeq FusionScan TCGA_RNA-Seq BARD1-ITGAV BARD1 chr2 215632205 - ITGAV chr2 187466747 + Exonic hg19 STAD TCGA-BR-8589 2 In-Frame Intra-chr q35 Tumor suppressor gene q32.1 Tumor suppressor gene 13107 ChimerSeq FusionScan TCGA_RNA-Seq PPM1A-ERICH1 PPM1A chr14 60716395 + ERICH1 chr8 624047 - Exonic hg19 STAD TCGA-BR-8589 2 5'UTR-CDS Inter-chr q23.1 Tumor suppressor gene 13108 ChimerSeq FusionScan TCGA_RNA-Seq RAD51AP1-GALNT8 RAD51AP1 chr12 4653070 + GALNT8 chr12 4848328 + Exonic hg19 STAD TCGA-BR-8589 2 In-Frame Intra-chr p13.32 p13.32 13109 ChimerSeq FusionScan TCGA_RNA-Seq FMNL2-KRT32 FMNL2 chr2 153378540 + KRT32 chr17 39616491 - Exonic hg19 STAD TCGA-R5-A7ZE 12 Out-of-Frame Inter-chr q23.3 q21.2 Seq+ 13110 ChimerSeq FusionScan TCGA_RNA-Seq AP3D1-PLEKHF1 AP3D1 chr19 2151237 - PLEKHF1 chr19 30164730 + Exonic hg19 STAD TCGA-R5-A7ZE 10 CDS-5'UTR Intra-chr p13.3 q12 Seq+ 13111 ChimerSeq FusionScan TCGA_RNA-Seq DOT1L-PLEKHF1 DOT1L chr19 2164264 + PLEKHF1 chr19 30164730 + Exonic hg19 STAD TCGA-R5-A7ZE 9 CDS-5'UTR Intra-chr p13.3 Oncogene Transcription factor q12 Seq+ 13112 ChimerSeq FusionScan TCGA_RNA-Seq LCLAT1-FMNL2 LCLAT1 chr2 30670249 + FMNL2 chr2 153378456 + Exonic hg19 STAD TCGA-R5-A7ZE 8 5'UTR-CDS Intra-chr p23.1 q23.3 Seq+ 13113 ChimerSeq FusionScan TCGA_RNA-Seq LCLAT1-FMNL2 LCLAT1 chr2 30682588 + FMNL2 chr2 153378456 + Exonic hg19 STAD TCGA-R5-A7ZE 7 Out-of-Frame Intra-chr p23.1 q23.3 Seq+ 13114 ChimerSeq FusionScan TCGA_RNA-Seq CMIP-BCMO1 CMIP chr16 81479146 + BCMO1 chr16 81314461 + Exonic hg19 STAD TCGA-R5-A7ZE 3 In-Frame Intra-chr q23.2 Seq+ 13115 ChimerSeq FusionScan TCGA_RNA-Seq SFMBT1-TKT SFMBT1 chr3 53079831 - TKT chr3 53276258 - Exonic hg19 STAD TCGA-R5-A7ZE 3 5'UTR-CDS Intra-chr p21.1 p21.1 Tumor suppressor gene Seq+ 13116 ChimerSeq FusionScan TCGA_RNA-Seq NCOA5-RUNX1 NCOA5 chr20 44718455 - RUNX1 chr21 36231875 - Exonic hg19 STAD TCGA-R5-A7ZE 2 5'UTR-CDS Inter-chr q13.12 Tumor suppressor gene q22.12 Oncogene Tumor suppressor gene Transcription factor 13117 ChimerSeq FusionScan TCGA_RNA-Seq PLCD1-NDUFA10 PLCD1 chr3 38070996 - NDUFA10 chr2 240900603 - Exonic hg19 STAD TCGA-R5-A7ZE 2 Out-of-Frame Inter-chr p22.2 Tumor suppressor gene 13118 ChimerSeq FusionScan TCGA_RNA-Seq UPP1-ARHGEF7 UPP1 chr7 48134424 + ARHGEF7 chr13 111935485 + Exonic hg19 STAD TCGA-R5-A7ZE 2 Out-of-Frame Inter-chr p12.3 q34 13119 ChimerSeq FusionScan TCGA_RNA-Seq SLIRP-TIMM9 SLIRP chr14 78177239 + TIMM9 chr14 58875886 - Exonic hg19 STAD TCGA-R5-A7ZE 2 In-Frame Intra-chr q24.3 q23.1 13120 ChimerSeq FusionScan TCGA_RNA-Seq C12orf35-ZDHHC5 C12orf35 chr12 32123290 + ZDHHC5 chr11 57460082 + Exonic hg19 STAD TCGA-R5-A7ZE 2 5'UTR-CDS Inter-chr q12.1 13121 ChimerSeq FusionScan TCGA_RNA-Seq CD44-CAT CD44 chr11 35243279 + CAT chr11 34472534 + Exonic hg19 STAD TCGA-R5-A7ZE 2 Out-of-Frame Intra-chr p13 Oncogene Tumor suppressor gene p13 Tumor suppressor gene 13122 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0232-LRCH3 KIAA0232 chr4 6826411 + LRCH3 chr3 197541778 + Exonic hg19 STAD TCGA-R5-A7ZE 2 Out-of-Frame Inter-chr p16.1 q29 Seq+ 13123 ChimerSeq FusionScan TCGA_RNA-Seq CASC3-ACLY CASC3 chr17 38324670 + ACLY chr17 40024157 - Exonic hg19 STAD TCGA-R5-A7ZE 2 Out-of-Frame Intra-chr q21.1 q21.2 Seq+ 13124 ChimerSeq FusionScan TCGA_RNA-Seq NASP-PLRG1 NASP chr1 46082065 + PLRG1 chr4 155462086 - Exonic hg19 STAD TCGA-R5-A7ZE 2 In-Frame Inter-chr p34.1 q31.3 13125 ChimerSeq FusionScan TCGA_RNA-Seq SLC28A3-SERTAD2 SLC28A3 chr9 86955488 - SERTAD2 chr2 64864009 - Exonic hg19 STAD TCGA-R5-A7ZE 2 CDS-5'UTR Inter-chr q21.33 p14 13126 ChimerSeq FusionScan TCGA_RNA-Seq WIPF2-ERBB2 WIPF2 chr17 38421398 + ERBB2 chr17 37872553 + Exonic hg19 STAD TCGA-R5-A7ZE 2 In-Frame Intra-chr q21.2 q12 Oncogene Seq+ 13127 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD33B-LBR ANKRD33B chr5 10564945 + LBR chr1 225592228 - Exonic hg19 STAD TCGA-FP-A4BF 3 Out-of-Frame Inter-chr p15.2 q42.12 13128 ChimerSeq FusionScan TCGA_RNA-Seq BET1L-GUK1 BET1L chr11 205610 - GUK1 chr1 228335315 + Exonic hg19 STAD TCGA-FP-A4BF 3 In-Frame Inter-chr p15.5 q42.13 13129 ChimerSeq FusionScan TCGA_RNA-Seq CDKAL1-HIVEP3 CDKAL1 chr6 20548936 + HIVEP3 chr1 42094618 - Exonic hg19 STAD TCGA-FP-A4BF 2 CDS-5'UTR Inter-chr p22.3 p34.2 Tumor suppressor gene Transcription factor 13130 ChimerSeq FusionScan TCGA_RNA-Seq FRMPD1-ZCCHC7 FRMPD1 chr9 37692739 + ZCCHC7 chr9 37302184 + Exonic hg19 STAD TCGA-FP-A4BF 2 Out-of-Frame Intra-chr p13.2 p13.2 13131 ChimerSeq FusionScan TCGA_RNA-Seq PPM1G-NUP62 PPM1G chr2 27632169 - NUP62 chr19 50413141 - Exonic hg19 STAD TCGA-FP-A4BF 2 CDS-5'UTR Inter-chr p23.3 q13.33 13132 ChimerSeq FusionScan TCGA_RNA-Seq ZEB1-UGP2 ZEB1 chr10 31608221 + UGP2 chr2 64109599 + Exonic hg19 STAD TCGA-FP-A4BF 2 Out-of-Frame Inter-chr p11.22 Transcription factor p15 13133 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-CHMP1A CPSF6 chr12 69656342 + CHMP1A chr16 89713739 - Exonic hg19 STAD TCGA-FP-A4BF 2 3'UTR-3'UTR Inter-chr q15 q24.3 Seq+ 13134 ChimerSeq FusionScan TCGA_RNA-Seq CDK13-SON CDK13 chr7 40037263 + SON chr21 34921781 + Exonic hg19 STAD TCGA-FP-A4BF 2 Out-of-Frame Inter-chr p14.1 q22.11 Transcription factor 13135 ChimerSeq FusionScan TCGA_RNA-Seq SLC25A45-PCNT SLC25A45 chr11 65149956 - PCNT chr21 47851442 + Exonic hg19 STAD TCGA-FP-A4BF 2 5'UTR-CDS Inter-chr q13.1 q22.3 13136 ChimerSeq FusionScan TCGA_RNA-Seq EPSTI1-DNAJC15 EPSTI1 chr13 43566113 - DNAJC15 chr13 43652747 + Exonic hg19 STAD TCGA-FP-A4BF 2 Out-of-Frame Intra-chr q14.11 q14.11 Seq+ 13137 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-STAG2 RCC1 chr1 28834672 + STAG2 chrX 123215229 + Exonic hg19 STAD TCGA-IN-A7NR 2 5'UTR-CDS Inter-chr p35.3 q25 Oncogene 13138 ChimerSeq FusionScan TCGA_RNA-Seq ACBD5-PCMTD2 ACBD5 chr10 27530987 - PCMTD2 chr20 62899320 + Exonic hg19 STAD TCGA-IN-A7NR 2 5'UTR-CDS Inter-chr p12.1 13139 ChimerSeq FusionScan TCGA_RNA-Seq RPS13-CUL3 RPS13 chr11 17098714 - CUL3 chr2 225368539 - Exonic hg19 STAD TCGA-IN-A7NR 2 3'UTR-CDS Inter-chr p15.1 q36.2 13140 ChimerSeq FusionScan TCGA_RNA-Seq SRSF11-TOMM7 SRSF11 chr1 70712590 + TOMM7 chr7 22852804 - Exonic hg19 STAD TCGA-IN-A7NR 2 In-Frame Inter-chr p31.1 p15.3 13141 ChimerSeq FusionScan TCGA_RNA-Seq IGLL5-CHMP1A IGLL5 chr22 23230439 + CHMP1A chr16 89713739 - Exonic hg19 STAD TCGA-RD-A8N0 2 In-Frame Inter-chr q11.22 q24.3 13142 ChimerSeq FusionScan TCGA_RNA-Seq MTHFR-EXOSC10 MTHFR chr1 11860268 - EXOSC10 chr1 11155938 - Exonic hg19 STAD TCGA-VQ-AA6A 7 Out-of-Frame Intra-chr p36.22 p36.22 Seq+ 13143 ChimerSeq FusionScan TCGA_RNA-Seq TAOK1-ANKRD13B TAOK1 chr17 27778698 + ANKRD13B chr17 27934759 + Exonic hg19 STAD TCGA-VQ-AA6A 4 In-Frame Intra-chr q11.2 q11.2 Seq+ 13144 ChimerSeq FusionScan TCGA_RNA-Seq FNTA-ZFPM1 FNTA chr8 42924802 + ZFPM1 chr16 88598409 + Exonic hg19 STAD TCGA-BR-6707 2 Out-of-Frame Inter-chr p11.21 q24.2 Transcription factor 13145 ChimerSeq FusionScan TCGA_RNA-Seq GATAD2A-FAM134C GATAD2A chr19 19496947 + FAM134C chr17 40738909 - Exonic hg19 STAD TCGA-IN-A6RO 3 5'UTR-CDS Inter-chr p13.11 Transcription factor Seq+ 13146 ChimerSeq FusionScan TCGA_RNA-Seq PIP5K1C-CAMSAP3 PIP5K1C chr19 3700294 - CAMSAP3 chr19 7670111 + Exonic hg19 STAD TCGA-IN-A6RO 2 In-Frame Intra-chr p13.3 p13.2 13147 ChimerSeq FusionScan TCGA_RNA-Seq NQO1-B2M NQO1 chr16 69752272 - B2M chr15 45009804 + Exonic hg19 STAD TCGA-IN-A6RO 2 CDS-3'UTR Inter-chr q22.1 Oncogene 13148 ChimerSeq FusionScan TCGA_RNA-Seq GATAD2A-FAM134C GATAD2A chr19 19496947 + FAM134C chr17 40738155 - Exonic hg19 STAD TCGA-IN-A6RO 2 5'UTR-CDS Inter-chr p13.11 Transcription factor Seq+ 13149 ChimerSeq FusionScan TCGA_RNA-Seq RHOF-TMEM141 RHOF chr12 122218988 - TMEM141 chr9 139686162 + Exonic hg19 STAD TCGA-IN-A6RO 2 In-Frame Inter-chr q24.31 q34.3 13150 ChimerSeq FusionScan TCGA_RNA-Seq LRRN1-PCDP1 LRRN1 chr3 3841603 + PCDP1 chr2 120303660 + Exonic hg19 STAD TCGA-FP-8211 2 5'UTR-5'UTR Inter-chr p26.2 Seq+ 13151 ChimerSeq FusionScan TCGA_RNA-Seq SLC27A1-DAZAP1 SLC27A1 chr19 17581516 + DAZAP1 chr19 1417498 + Exonic hg19 STAD TCGA-FP-8211 2 In-Frame Intra-chr p13.11 p13.3 13152 ChimerSeq FusionScan TCGA_RNA-Seq HUWE1-FAM156A HUWE1 chrX 53674310 - FAM156A chrX 52984444 - Exonic hg19 STAD TCGA-FP-8211 2 CDS-5'UTR Intra-chr p11.22 p11.22 Seq+ 13153 ChimerSeq FusionScan TCGA_RNA-Seq EFNA1-ARNTL2 EFNA1 chr1 155100545 + ARNTL2 chr12 27521194 + Exonic hg19 STAD TCGA-FP-8211 2 Out-of-Frame Inter-chr q22 p11.23 Transcription factor Seq+ 13154 ChimerSeq FusionScan TCGA_RNA-Seq ERRFI1-NCF2 ERRFI1 chr1 8086217 - NCF2 chr1 183542427 - Exonic hg19 STAD TCGA-VQ-A8E7 14 5'UTR-CDS Intra-chr p36.23 Tumor suppressor gene q25.3 Seq+ 13155 ChimerSeq FusionScan TCGA_RNA-Seq DTL-PPP2R5A DTL chr1 212251604 + PPP2R5A chr1 212506838 + Exonic hg19 STAD TCGA-VQ-A8E7 8 In-Frame Intra-chr q32.3 q32.3 Seq+ 13156 ChimerSeq FusionScan TCGA_RNA-Seq LGR4-KCNAB1 LGR4 chr11 27493664 - KCNAB1 chr3 156139404 + Exonic hg19 STAD TCGA-BR-6458 5 In-Frame Inter-chr p14.1 q25.31 13157 ChimerSeq FusionScan TCGA_RNA-Seq PSIP1-PTPRD PSIP1 chr9 15472629 - PTPRD chr9 9397482 - Exonic hg19 STAD TCGA-BR-6458 3 CDS-5'UTR Intra-chr p22.3 Oncogene Oncogene Tumor suppressor gene 13158 ChimerSeq FusionScan TCGA_RNA-Seq GLG1-MRPS6 GLG1 chr16 74640554 - MRPS6 chr21 35497640 + Exonic hg19 STAD TCGA-BR-6458 2 In-Frame Inter-chr q23.1 q22.11 13159 ChimerSeq FusionScan TCGA_RNA-Seq EFTUD1-PDE4DIP EFTUD1 chr15 82519790 - PDE4DIP chr1 144923821 - Exonic hg19 STAD TCGA-BR-6458 2 Out-of-Frame Inter-chr q21.2 Oncogene 13160 ChimerSeq FusionScan TCGA_RNA-Seq ADNP-TRAP1 ADNP chr20 49547362 - TRAP1 chr16 3729791 - Exonic hg19 STAD TCGA-BR-6458 2 5'UTR-CDS Inter-chr q13.13 Transcription factor p13.3 13161 ChimerSeq FusionScan TCGA_RNA-Seq C1orf27-EGLN1 C1orf27 chr1 186352288 + EGLN1 chr1 231509845 - Exonic hg19 STAD TCGA-BR-6458 2 In-Frame Intra-chr q31.1 q42.2 Tumor suppressor gene Seq+ 13162 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 STAD TCGA-BR-6458 2 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 13163 ChimerSeq FusionScan TCGA_RNA-Seq CAMSAP2-GALNT2 CAMSAP2 chr1 200776665 + GALNT2 chr1 230400986 + Exonic hg19 STAD TCGA-BR-6458 2 Out-of-Frame Intra-chr q32.1 q42.13 13164 ChimerSeq FusionScan TCGA_RNA-Seq MTMR2-ZW10 MTMR2 chr11 95657038 - ZW10 chr11 113614762 - Exonic hg19 STAD TCGA-BR-6458 2 Out-of-Frame Intra-chr q21 q23.2 13165 ChimerSeq FusionScan TCGA_RNA-Seq CAMSAP2-GALNT2 CAMSAP2 chr1 200776665 + GALNT2 chr1 230410190 + Exonic hg19 STAD TCGA-BR-6458 2 In-Frame Intra-chr q32.1 q42.13 13166 ChimerSeq FusionScan TCGA_RNA-Seq PELO-LAMA4 PELO chr5 52084248 + LAMA4 chr6 112452303 - Exonic hg19 STAD TCGA-BR-8284 2 5'UTR-CDS Inter-chr q11.2 q21 Seq+ 13167 ChimerSeq FusionScan TCGA_RNA-Seq PTPRC-STAG1 PTPRC chr1 198661502 + STAG1 chr3 136096594 - Exonic hg19 STAD TCGA-BR-8284 2 Out-of-Frame Inter-chr Tumor suppressor gene q22.3 Seq+ 13168 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-RTF1 RCC1 chr1 28834672 + RTF1 chr15 41730518 + Exonic hg19 STAD TCGA-BR-8284 2 5'UTR-CDS Inter-chr p35.3 q15.1 Seq+ 13169 ChimerSeq FusionScan TCGA_RNA-Seq MBOAT1-CDKAL1 MBOAT1 chr6 20124638 - CDKAL1 chr6 20649523 + Exonic hg19 STAD TCGA-BR-8284 2 In-Frame Intra-chr p22.3 p22.3 Seq+ 13170 ChimerSeq FusionScan TCGA_RNA-Seq NDUFB6-SEPSECS NDUFB6 chr9 32570957 - SEPSECS chr4 25160729 - Exonic hg19 STAD TCGA-BR-8284 2 In-Frame Inter-chr p21.1 p15.2 Seq+ 13171 ChimerSeq FusionScan TCGA_RNA-Seq FAM69A-ENSA FAM69A chr1 93312739 - ENSA chr1 150598284 - Exonic hg19 STAD TCGA-BR-8284 2 In-Frame Intra-chr p22.1 q21.3 Seq+ 13172 ChimerSeq FusionScan TCGA_RNA-Seq TNKS2-ANKRD44 TNKS2 chr10 93558646 + ANKRD44 chr2 198011829 - Exonic hg19 STAD TCGA-BR-8284 2 Out-of-Frame Inter-chr q23.32 q33.1 13173 ChimerSeq FusionScan TCGA_RNA-Seq EIF3J-CTDSPL2 EIF3J chr15 44829625 + CTDSPL2 chr15 44751188 + Exonic hg19 STAD TCGA-BR-A4J5 2 CDS-5'UTR Intra-chr q21.1 q15.3 13174 ChimerSeq FusionScan TCGA_RNA-Seq SOS2-ERP44 SOS2 chr14 50697914 - ERP44 chr9 102822454 - Exonic hg19 STAD TCGA-BR-A4J5 2 In-Frame Inter-chr q21.3 q31.1 13175 ChimerSeq FusionScan TCGA_RNA-Seq C12orf36-KANK2 C12orf36 chr12 13529157 - KANK2 chr19 11289396 - Exonic hg19 STAD TCGA-BR-A4J5 2 3'UTR-CDS Inter-chr p13.2 13176 ChimerSeq FusionScan TCGA_RNA-Seq PGGT1B-TICAM2 PGGT1B chr5 114588833 - TICAM2 chr5 114917012 - Exonic hg19 STAD TCGA-BR-A4J5 2 CDS-5'UTR Intra-chr q22.3 q22.3 13177 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC8-RPL10 DNAJC8 chr1 28559431 - RPL10 chrX 153626837 + Exonic hg19 STAD TCGA-BR-A4J5 2 CDS-5'UTR Inter-chr p35.3 q28 Tumor suppressor gene 13178 ChimerSeq FusionScan TCGA_RNA-Seq ZMYM1-RAB11FIP3 ZMYM1 chr1 35563167 + RAB11FIP3 chr16 532524 + Exonic hg19 STAD TCGA-VQ-A8PO 2 Out-of-Frame Inter-chr p34.3 13179 ChimerSeq FusionScan TCGA_RNA-Seq STAU1-B4GALT5 STAU1 chr20 47804652 - B4GALT5 chr20 48273239 - Exonic hg19 STAD TCGA-VQ-A8PO 2 5'UTR-CDS Intra-chr q13.13 q13.13 13180 ChimerSeq FusionScan TCGA_RNA-Seq BET1L-GUK1 BET1L chr11 205610 - GUK1 chr1 228335315 + Exonic hg19 STAD TCGA-FP-A4BF 3 In-Frame Inter-chr p15.5 q42.13 13181 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD33B-LBR ANKRD33B chr5 10564945 + LBR chr1 225592228 - Exonic hg19 STAD TCGA-FP-A4BF 3 Out-of-Frame Inter-chr p15.2 q42.12 13182 ChimerSeq FusionScan TCGA_RNA-Seq PPM1G-NUP62 PPM1G chr2 27632169 - NUP62 chr19 50413141 - Exonic hg19 STAD TCGA-FP-A4BF 2 CDS-5'UTR Inter-chr p23.3 q13.33 13183 ChimerSeq FusionScan TCGA_RNA-Seq ZEB1-UGP2 ZEB1 chr10 31608221 + UGP2 chr2 64109599 + Exonic hg19 STAD TCGA-FP-A4BF 2 Out-of-Frame Inter-chr p11.22 Transcription factor p15 13184 ChimerSeq FusionScan TCGA_RNA-Seq SLC25A45-PCNT SLC25A45 chr11 65149956 - PCNT chr21 47851442 + Exonic hg19 STAD TCGA-FP-A4BF 2 5'UTR-CDS Inter-chr q13.1 q22.3 13185 ChimerSeq FusionScan TCGA_RNA-Seq FRMPD1-ZCCHC7 FRMPD1 chr9 37692739 + ZCCHC7 chr9 37302184 + Exonic hg19 STAD TCGA-FP-A4BF 2 Out-of-Frame Intra-chr p13.2 p13.2 13186 ChimerSeq FusionScan TCGA_RNA-Seq EPS8-RERGL EPS8 chr12 15942094 - RERGL chr12 18241890 - Exonic hg19 STAD TCGA-BR-A4PF 22 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 13187 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHA5-RERGL PLEKHA5 chr12 19285384 + RERGL chr12 18241890 - Exonic hg19 STAD TCGA-BR-A4PF 11 Out-of-Frame Intra-chr p12.3 p12.3 Seq+ 13188 ChimerSeq FusionScan TCGA_RNA-Seq FAR2-NFE2 FAR2 chr12 29474857 + NFE2 chr12 54689088 - Exonic hg19 STAD TCGA-BR-A4PF 4 CDS-5'UTR Intra-chr p11.22 q13.13 Transcription factor Seq+ 13189 ChimerSeq FusionScan TCGA_RNA-Seq PON2-CTDSPL2 PON2 chr7 95045553 - CTDSPL2 chr15 44791924 + Exonic hg19 STAD TCGA-BR-A4PF 2 In-Frame Inter-chr q21.3 q15.3 13190 ChimerSeq FusionScan TCGA_RNA-Seq EIF1-PPA2 EIF1 chr17 39845321 + PPA2 chr4 106320321 - Exonic hg19 STAD TCGA-BR-6455 2 In-Frame Inter-chr q21.2 q24 13191 ChimerSeq FusionScan TCGA_RNA-Seq RPS20-POLR2I RPS20 chr8 56986618 - POLR2I chr19 36605615 - Exonic hg19 STAD TCGA-BR-6455 2 Out-of-Frame Inter-chr q12.1 q13.12 13192 ChimerSeq FusionScan TCGA_RNA-Seq CMTM4-GET4 CMTM4 chr16 66655964 - GET4 chr7 925692 + Exonic hg19 STAD TCGA-BR-6455 2 In-Frame Inter-chr q22.1 p22.3 13193 ChimerSeq FusionScan TCGA_RNA-Seq PID1-CHMP3 PID1 chr2 230020533 - CHMP3 chr2 86737602 - Exonic hg19 STAD TCGA-BR-6455 2 Out-of-Frame Intra-chr q36.3 p11.2 13194 ChimerSeq FusionScan TCGA_RNA-Seq POLA1-KANSL2 POLA1 chrX 24761446 + KANSL2 chr12 49048843 - Exonic hg19 STAD TCGA-BR-6455 2 Out-of-Frame Inter-chr p22.11 q13.11 13195 ChimerSeq FusionScan TCGA_RNA-Seq TLN1-ACTN4 TLN1 chr9 35710793 - ACTN4 chr19 39214253 + Exonic hg19 STAD TCGA-BR-6455 2 Out-of-Frame Inter-chr p13.3 13196 ChimerSeq FusionScan TCGA_RNA-Seq TMEM123-MMP20 TMEM123 chr11 102319542 - MMP20 chr11 102449873 - Exonic hg19 STAD TCGA-CD-8527 3 Out-of-Frame Intra-chr q22.2 q22.2 Seq+ 13197 ChimerSeq FusionScan TCGA_RNA-Seq NOC3L-PLCE1 NOC3L chr10 96122586 - PLCE1 chr10 96087724 + Exonic hg19 STAD TCGA-CD-8527 3 CDS-3'UTR Intra-chr q23.33 q23.33 Tumor suppressor gene Seq+ 13198 ChimerSeq FusionScan TCGA_RNA-Seq SHFM1-EZH2 SHFM1 chr7 96324109 - EZH2 chr7 148512638 - Exonic hg19 STAD TCGA-CD-8527 2 In-Frame Intra-chr q36.1 Oncogene Tumor suppressor gene 13199 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-POLE2 RCC1 chr1 28832596 + POLE2 chr14 50141145 - Exonic hg19 STAD TCGA-CD-8527 2 5'UTR-CDS Inter-chr p35.3 q21.3 Seq+ 13200 ChimerSeq FusionScan TCGA_RNA-Seq CPSF1-ACY1 CPSF1 chr8 145634398 - ACY1 chr3 52022781 + Exonic hg19 STAD TCGA-CD-8527 2 Out-of-Frame Inter-chr q24.3 p21.2 Tumor suppressor gene Seq+ 13201 ChimerSeq FusionScan TCGA_RNA-Seq MGRN1-C16orf96 MGRN1 chr16 4675049 + C16orf96 chr16 4644351 + Exonic hg19 STAD TCGA-CD-8527 2 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 13202 ChimerSeq FusionScan TCGA_RNA-Seq ATP6V0E2-PPP2R5C ATP6V0E2 chr7 149572734 + PPP2R5C chr14 102229241 + Exonic hg19 STAD TCGA-CD-8527 2 Out-of-Frame Inter-chr q36.1 q32.31 Tumor suppressor gene Seq+ 13203 ChimerSeq FusionScan TCGA_RNA-Seq MRPL35-ADK MRPL35 chr2 86437736 + ADK chr10 76349039 + Exonic hg19 STAD TCGA-HU-A4GY 2 Out-of-Frame Inter-chr p11.2 q22.2 13204 ChimerSeq FusionScan TCGA_RNA-Seq ABCF1-MGAT4A ABCF1 chr6 30539337 + MGAT4A chr2 99343030 - Exonic hg19 STAD TCGA-HU-A4GY 2 CDS-5'UTR Inter-chr q11.2 13205 ChimerSeq FusionScan TCGA_RNA-Seq NCAPH2-GEMIN2 NCAPH2 chr22 50954977 + GEMIN2 chr14 39601161 + Exonic hg19 STAD TCGA-HU-A4GY 2 In-Frame Inter-chr q13.33 q21.1 13206 ChimerSeq FusionScan TCGA_RNA-Seq PAPLN-COL6A2 PAPLN chr14 73732215 + COL6A2 chr21 47533921 + Exonic hg19 STAD TCGA-HU-A4GY 2 Out-of-Frame Inter-chr q24.2 q22.3 13207 ChimerSeq FusionScan TCGA_RNA-Seq SETD3-WDR25 SETD3 chr14 99924615 - WDR25 chr14 100992206 + Exonic hg19 STAD TCGA-RD-A8N1 2 In-Frame Intra-chr q32.2 q32.2 13208 ChimerSeq FusionScan TCGA_RNA-Seq ERF-PPP1R12C ERF chr19 42759129 - PPP1R12C chr19 55607703 - Exonic hg19 STAD TCGA-BR-8081 2 Out-of-Frame Intra-chr q13.2 Tumor suppressor gene Transcription factor q13.42 13209 ChimerSeq FusionScan TCGA_RNA-Seq SLC25A3-EZH2 SLC25A3 chr12 98987913 + EZH2 chr7 148511229 - Exonic hg19 STAD TCGA-BR-8081 2 In-Frame Inter-chr q23.1 q36.1 Oncogene Tumor suppressor gene 13210 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD28-EXOSC7 ANKRD28 chr3 15836729 - EXOSC7 chr3 45030631 + Exonic hg19 STAD TCGA-BR-8081 2 In-Frame Intra-chr p25.1 p21.31 13211 ChimerSeq FusionScan TCGA_RNA-Seq B2M-UBB B2M chr15 45003811 + UBB chr17 16285215 + Exonic hg19 STAD TCGA-BR-8081 2 CDS-5'UTR Inter-chr Oncogene p11.2 Seq+ 13212 ChimerSeq FusionScan TCGA_RNA-Seq RPL5-SMARCB1 RPL5 chr1 93297674 + SMARCB1 chr22 24158956 + Exonic hg19 STAD TCGA-BR-8081 2 Out-of-Frame Inter-chr p22.1 Tumor suppressor gene q11.23 Oncogene Tumor suppressor gene 13213 ChimerSeq FusionScan TCGA_RNA-Seq AP2A2-TALDO1 AP2A2 chr11 926088 + TALDO1 chr11 755878 + Exonic hg19 STAD TCGA-CG-5732 5 In-Frame Intra-chr p15.5 p15.5 Seq+ 13214 ChimerSeq FusionScan TCGA_RNA-Seq OCLN-RAD17 OCLN chr5 68800121 + RAD17 chr5 68709857 + Exonic hg19 STAD TCGA-CG-5732 4 In-Frame Intra-chr q13.2 Seq+ 13215 ChimerSeq FusionScan TCGA_RNA-Seq IQCK-C16orf62 IQCK chr16 19838459 + C16orf62 chr16 19680481 + Exonic hg19 STAD TCGA-CG-5732 3 In-Frame Intra-chr p12.3 p12.3 13216 ChimerSeq FusionScan TCGA_RNA-Seq MED13-BRIP1 MED13 chr17 60030325 - BRIP1 chr17 59858366 - Exonic hg19 STAD TCGA-CG-5732 2 Out-of-Frame Intra-chr q23.2 q23.2 Oncogene Seq+ 13217 ChimerSeq FusionScan TCGA_RNA-Seq RRAS2-MED13L RRAS2 chr11 14380308 - MED13L chr12 116453079 - Exonic hg19 STAD TCGA-CG-5732 2 Out-of-Frame Inter-chr p15.2 q24.21 13218 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP15-RBKS ARHGAP15 chr2 144008169 + RBKS chr2 28004655 - Exonic hg19 STAD TCGA-CG-5732 2 In-Frame Intra-chr q22.2 p23.2 13219 ChimerSeq FusionScan TCGA_RNA-Seq ACAA2-INADL ACAA2 chr18 47339838 - INADL chr1 62613955 + Exonic hg19 STAD TCGA-CG-5732 2 Out-of-Frame Inter-chr q21.1 13220 ChimerSeq FusionScan TCGA_RNA-Seq RICTOR-AUH RICTOR chr5 39021140 - AUH chr9 94060358 - Exonic hg19 STAD TCGA-CG-5732 2 Out-of-Frame Inter-chr p13.1 q22.31 13221 ChimerSeq FusionScan TCGA_RNA-Seq TPX2-HM13 TPX2 chr20 30347982 + HM13 chr20 30136831 + Exonic hg19 STAD TCGA-CG-5732 2 In-Frame Intra-chr q11.21 q11.21 Seq+ 13222 ChimerSeq FusionScan TCGA_RNA-Seq PTPMT1-BAD PTPMT1 chr11 47587538 + BAD chr11 64039275 - Exonic hg19 STAD TCGA-MX-A5UJ 2 In-Frame Intra-chr p11.2 q13.1 13223 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1191-C5orf25 KIAA1191 chr5 175786813 - C5orf25 chr5 175740693 + Exonic hg19 STAD TCGA-MX-A5UJ 2 5'UTR-CDS Intra-chr q35.2 13224 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R1B-RPRD1B PPP2R1B chr11 111612776 - RPRD1B chr20 36718127 + Exonic hg19 STAD TCGA-MX-A5UJ 2 Out-of-Frame Inter-chr q23.1 Tumor suppressor gene q11.23 13225 ChimerSeq FusionScan TCGA_RNA-Seq MARVELD3-PHLPP2 MARVELD3 chr16 71663397 + PHLPP2 chr16 71724612 - Exonic hg19 STAD TCGA-HU-A4GD 3 In-Frame Intra-chr q22.2 q22.2 Tumor suppressor gene Seq+ 13226 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D23-CBLB TBC1D23 chr3 100000691 + CBLB chr3 105423017 - Exonic hg19 STAD TCGA-HU-A4GD 2 Out-of-Frame Intra-chr q12.1 q13.11 13227 ChimerSeq FusionScan TCGA_RNA-Seq AXIN1-DNMT3A AXIN1 chr16 354303 - DNMT3A chr2 25523112 - Exonic hg19 STAD TCGA-BR-8686 2 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene p23.3 Oncogene Tumor suppressor gene 13228 ChimerSeq FusionScan TCGA_RNA-Seq SRGAP2P2-RHOU SRGAP2P2 chr1 143916308 + RHOU chr1 228879031 + Exonic hg19 STAD TCGA-BR-8686 2 5'UTR-5'UTR Intra-chr q42.13 13229 ChimerSeq FusionScan TCGA_RNA-Seq DSCR3-TBCD DSCR3 chr21 38639538 - TBCD chr17 80881527 + Exonic hg19 STAD TCGA-BR-8686 2 In-Frame Inter-chr q22.13 13230 ChimerSeq FusionScan TCGA_RNA-Seq POM121C-DENND1C POM121C chr7 75103969 - DENND1C chr19 6468964 - Exonic hg19 STAD TCGA-BR-8680 2 5'UTR-CDS Inter-chr q11.23 p13.3 13231 ChimerSeq FusionScan TCGA_RNA-Seq ACACA-RARA ACACA chr17 35687112 - RARA chr17 38487108 + Exonic hg19 STAD TCGA-BR-8680 2 CDS-5'UTR Intra-chr q21.2 Oncogene Transcription factor Seq+ 13232 ChimerSeq FusionScan TCGA_RNA-Seq BRD3-SET BRD3 chr9 136933066 - SET chr9 131453448 + Exonic hg19 STAD TCGA-BR-8680 2 5'UTR-CDS Intra-chr q34.2 Atypical:BRD Oncogene q34.11 13233 ChimerSeq FusionScan TCGA_RNA-Seq NOMO3-HRASLS2 NOMO3 chr16 16371340 + HRASLS2 chr11 63320537 - Exonic hg19 STAD TCGA-HU-A4GQ 4 In-Frame Inter-chr p13.11 q12.3 Tumor suppressor gene 13234 ChimerSeq FusionScan TCGA_RNA-Seq NOMO1-HRASLS2 NOMO1 chr16 14972691 + HRASLS2 chr11 63320537 - Exonic hg19 STAD TCGA-HU-A4GQ 4 In-Frame Inter-chr q12.3 Tumor suppressor gene 13235 ChimerSeq FusionScan TCGA_RNA-Seq ANK3-TES ANK3 chr10 61994445 - TES chr7 115874587 + Exonic hg19 STAD TCGA-HU-A4GQ 2 In-Frame Inter-chr q21.2 q31.2 Tumor suppressor gene 13236 ChimerSeq FusionScan TCGA_RNA-Seq CAPZA2-ST7 CAPZA2 chr7 116502704 + ST7 chr7 116739815 + Exonic hg19 STAD TCGA-HU-A4GQ 2 Out-of-Frame Intra-chr q31.2 q31.2 Tumor suppressor gene 13237 ChimerSeq FusionScan TCGA_RNA-Seq RAP1B-QRICH1 RAP1B chr12 69004823 + QRICH1 chr3 49114471 - Exonic hg19 STAD TCGA-HU-A4GQ 2 5'UTR-5'UTR Inter-chr q15 p21.31 13238 ChimerSeq FusionScan TCGA_RNA-Seq SELRC1-SMEK2 SELRC1 chr1 53163892 - SMEK2 chr2 55842642 - Exonic hg19 STAD TCGA-HU-A4GQ 2 In-Frame Inter-chr 13239 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-FOXN3 RCC1 chr1 28834672 + FOXN3 chr14 89817152 - Exonic hg19 STAD TCGA-HU-A4GQ 2 5'UTR-CDS Inter-chr p35.3 q32.11 Transcription factor 13240 ChimerSeq FusionScan TCGA_RNA-Seq IFI35-NDUFB1 IFI35 chr17 41158985 + NDUFB1 chr14 92583986 - Exonic hg19 STAD TCGA-HU-A4GQ 2 Out-of-Frame Inter-chr q21.31 q32.12 13241 ChimerSeq FusionScan TCGA_RNA-Seq DHX9-VIM DHX9 chr1 182821479 + VIM chr10 17278292 + Exonic hg19 STAD TCGA-HU-A4GQ 2 In-Frame Inter-chr q25.3 p13 Tumor suppressor gene 13242 ChimerSeq FusionScan TCGA_RNA-Seq GALNT3-FCGRT GALNT3 chr2 166650524 - FCGRT chr19 50028713 + Exonic hg19 STAD TCGA-HU-A4H5 3 5'UTR-CDS Inter-chr q24.3 q13.33 13243 ChimerSeq FusionScan TCGA_RNA-Seq ZNF174-TRIM24 ZNF174 chr16 3454648 + TRIM24 chr7 138199956 + Exonic hg19 STAD TCGA-HU-A4H5 3 Out-of-Frame Inter-chr p13.3 Transcription factor q33 Oncogene Tumor suppressor gene 13244 ChimerSeq FusionScan TCGA_RNA-Seq PDDC1-TRAF3 PDDC1 chr11 770992 - TRAF3 chr14 103371549 + Exonic hg19 STAD TCGA-HU-A4H5 2 Out-of-Frame Inter-chr q32.32 13245 ChimerSeq FusionScan TCGA_RNA-Seq DISP2-CREBBP DISP2 chr15 40657926 + CREBBP chr16 3860780 - Exonic hg19 STAD TCGA-HU-A4H5 2 In-Frame Inter-chr q15.1 p13.3 Oncogene Tumor suppressor gene 13246 ChimerSeq FusionScan TCGA_RNA-Seq RPS8-OTUD7B RPS8 chr1 45242446 + OTUD7B chr1 149936274 - Exonic hg19 STAD TCGA-HU-A4H5 2 3'UTR-CDS Intra-chr p34.1 q21.2 13247 ChimerSeq FusionScan TCGA_RNA-Seq C6orf228-GINS1 C6orf228 chr6 11094622 + GINS1 chr20 25394425 + Exonic hg19 STAD TCGA-HU-A4H5 2 Out-of-Frame Inter-chr p11.21 13248 ChimerSeq FusionScan TCGA_RNA-Seq PHF20-CEP250 PHF20 chr20 34360001 + CEP250 chr20 34047802 + Exonic hg19 STAD TCGA-HU-A4H5 2 5'UTR-5'UTR Intra-chr q11.22 Transcription factor q11.22 Seq+ 13249 ChimerSeq FusionScan TCGA_RNA-Seq UBC-GNAS UBC chr12 125399132 - GNAS chr20 57470666 + Exonic hg19 STAD TCGA-HU-A4H5 2 5'UTR-5'UTR Inter-chr q24.31 q13.32 Oncogene 13250 ChimerSeq FusionScan TCGA_RNA-Seq UBC-GNAI3 UBC chr12 125399132 - GNAI3 chr1 110116358 + Exonic hg19 STAD TCGA-HU-A4H5 2 5'UTR-CDS Inter-chr q24.31 p13.3 13251 ChimerSeq FusionScan TCGA_RNA-Seq KIF26B-SMYD3 KIF26B chr1 245319985 + SMYD3 chr1 246498776 - Exonic hg19 STAD TCGA-HU-A4H5 2 In-Frame Intra-chr q44 Transcription factor Seq+ 13252 ChimerSeq FusionScan TCGA_RNA-Seq RNF220-NFIA RNF220 chr1 45115441 + NFIA chr1 61848908 + Exonic hg19 STAD TCGA-HU-A4H5 2 Out-of-Frame Intra-chr p34.1 p31.3 Transcription factor 13253 ChimerSeq FusionScan TCGA_RNA-Seq DDX58-ACO1 DDX58 chr9 32493758 - ACO1 chr9 32418125 + Exonic hg19 STAD TCGA-HU-A4H5 2 Out-of-Frame Intra-chr p21.1 Tumor suppressor gene p21.1 13254 ChimerSeq FusionScan TCGA_RNA-Seq SAFB-RRBP1 SAFB chr19 5623405 + RRBP1 chr20 17641173 - Exonic hg19 STAD TCGA-HU-A4H5 2 5'UTR-5'UTR Inter-chr p13.3 Tumor suppressor gene Transcription factor p12.1 13255 ChimerSeq FusionScan TCGA_RNA-Seq RFWD2-LRRC52 RFWD2 chr1 176132004 - LRRC52 chr1 165532741 + Exonic hg19 STAD TCGA-HU-A4H5 2 Out-of-Frame Intra-chr q25.2 Tumor suppressor gene q24.1 Seq+ 13256 ChimerSeq FusionScan TCGA_RNA-Seq ZNF717-LYZL4 ZNF717 chr3 75832456 - LYZL4 chr3 42438826 - Exonic hg19 STAD TCGA-HU-A4H5 2 Out-of-Frame Intra-chr p12.3 Transcription factor p22.1 13257 ChimerSeq FusionScan TCGA_RNA-Seq RNF43-AKAP9 RNF43 chr17 56492686 - AKAP9 chr7 91674321 + Exonic hg19 STAD TCGA-HU-A4H5 2 Out-of-Frame Inter-chr q22 Oncogene q21.2 Oncogene 13258 ChimerSeq FusionScan TCGA_RNA-Seq LCLAT1-SDC2 LCLAT1 chr2 30670249 + SDC2 chr8 97605707 + Exonic hg19 STAD TCGA-HU-A4H5 2 5'UTR-CDS Inter-chr p23.1 q22.1 13259 ChimerSeq FusionScan TCGA_RNA-Seq SETD8-SHARPIN SETD8 chr12 123868755 + SHARPIN chr8 145158128 - Exonic hg19 STAD TCGA-HU-A4H5 2 Out-of-Frame Inter-chr q24.3 13260 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHB2-SMAD2 PLEKHB2 chr2 131862971 + SMAD2 chr18 45423180 - Exonic hg19 STAD TCGA-HU-A4H5 2 5'UTR-5'UTR Inter-chr q21.1 q21.1 Oncogene Tumor suppressor gene 13261 ChimerSeq FusionScan TCGA_RNA-Seq ABHD12-TAF4 ABHD12 chr20 25371148 - TAF4 chr20 60575777 - Exonic hg19 STAD TCGA-HU-A4H5 2 In-Frame Intra-chr p11.21 13262 ChimerSeq FusionScan TCGA_RNA-Seq CSNK2A1-UBB CSNK2A1 chr20 524315 - UBB chr17 16285215 + Exonic hg19 STAD TCGA-HU-A4H5 2 5'UTR-5'UTR Inter-chr p13 Oncogene p11.2 13263 ChimerSeq FusionScan TCGA_RNA-Seq BAIAP2L1-GTF2I BAIAP2L1 chr7 97991668 - GTF2I chr7 74163604 + Exonic hg19 STAD TCGA-VQ-A8E0 22 In-Frame Intra-chr q22.1 q11.23 Transcription factor Seq+ 13264 ChimerSeq FusionScan TCGA_RNA-Seq DGKD-INPP5D DGKD chr2 234372929 + INPP5D chr2 234098495 + Exonic hg19 STAD TCGA-VQ-A8E0 11 In-Frame Intra-chr Seq+ 13265 ChimerSeq FusionScan TCGA_RNA-Seq SLC17A5-CD109 SLC17A5 chr6 74363515 - CD109 chr6 74432973 + Exonic hg19 STAD TCGA-VQ-A8E0 5 In-Frame Intra-chr q13 q13 13266 ChimerSeq FusionScan TCGA_RNA-Seq BAIAP2L1-TSHZ2 BAIAP2L1 chr7 98030113 - TSHZ2 chr20 52103682 + Exonic hg19 STAD TCGA-VQ-A8E0 4 CDS-3'UTR Inter-chr q22.1 q13.2 Transcription factor Seq+ 13267 ChimerSeq FusionScan TCGA_RNA-Seq SDSL-DTX1 SDSL chr12 113866264 + DTX1 chr12 113515228 + Exonic hg19 STAD TCGA-VQ-A8E0 4 In-Frame Intra-chr q24.13 q24.13 Seq+ 13268 ChimerSeq FusionScan TCGA_RNA-Seq TIMM17B-PQBP1 TIMM17B chrX 48755349 - PQBP1 chrX 48755212 + Exonic hg19 STAD TCGA-VQ-A8E0 3 5'UTR-5'UTR Intra-chr p11.23 p11.23 Seq+ 13269 ChimerSeq FusionScan TCGA_RNA-Seq SMYD4-SMG6 SMYD4 chr17 1731154 - SMG6 chr17 2091809 - Exonic hg19 STAD TCGA-VQ-A8E0 2 Out-of-Frame Intra-chr p13.3 Tumor suppressor gene p13.3 13270 ChimerSeq FusionScan TCGA_RNA-Seq CHRNA7-PRR16 CHRNA7 chr15 32323240 + PRR16 chr5 120021648 + Exonic hg19 STAD TCGA-VQ-A8E0 2 In-Frame Inter-chr q13.3 q23.1 Seq+ 13271 ChimerSeq FusionScan TCGA_RNA-Seq ARRDC1-EHMT1 ARRDC1 chr9 140509452 + EHMT1 chr9 140605418 + Exonic hg19 STAD TCGA-VQ-A8E0 2 Out-of-Frame Intra-chr q34.3 q34.3 Seq+ 13272 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57915655 + Exonic hg19 STAD TCGA-VQ-A8E0 2 Out-of-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 13273 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0232-MRFAP1 KIAA0232 chr4 6784568 + MRFAP1 chr4 6643456 + Exonic hg19 STAD TCGA-VQ-A8E0 2 5'UTR-3'UTR Intra-chr p16.1 p16.1 Seq+ 13274 ChimerSeq FusionScan TCGA_RNA-Seq ATF2-CYTIP ATF2 chr2 175994865 - CYTIP chr2 158283932 - Exonic hg19 STAD TCGA-VQ-A8PF 2 Out-of-Frame Intra-chr q31.1 Transcription factor q24.1 13275 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0319L-SRP19 KIAA0319L chr1 36019950 - SRP19 chr5 112227299 + Exonic hg19 STAD TCGA-VQ-A8PF 2 In-Frame Inter-chr p34.3 q22.2 13276 ChimerSeq FusionScan TCGA_RNA-Seq ATP2B4-TBC1D22A ATP2B4 chr1 203596347 + TBC1D22A chr22 47569140 + Exonic hg19 STAD TCGA-FP-8209 2 5'UTR-CDS Inter-chr q32.1 q13.31 Seq+ 13277 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0232-OCIAD1 KIAA0232 chr4 6784568 + OCIAD1 chr4 48834636 + Exonic hg19 STAD TCGA-FP-8209 2 5'UTR-5'UTR Intra-chr p16.1 p11 Seq+ 13278 ChimerSeq FusionScan TCGA_RNA-Seq HTRA1-LPP HTRA1 chr10 124249142 + LPP chr3 188123899 + Exonic hg19 STAD TCGA-FP-8209 2 CDS-5'UTR Inter-chr q26.13 Tumor suppressor gene q27.3 Oncogene 13279 ChimerSeq FusionScan TCGA_RNA-Seq APIP-CD44 APIP chr11 34937774 - CD44 chr11 35236398 + Exonic hg19 STAD TCGA-FP-8209 2 Out-of-Frame Intra-chr p13 p13 Oncogene Tumor suppressor gene Seq+ 13280 ChimerSeq FusionScan TCGA_RNA-Seq CYSTM1-MPP7 CYSTM1 chr5 139574237 + MPP7 chr10 28378770 - Exonic hg19 STAD TCGA-FP-8209 2 In-Frame Inter-chr q31.3 p12.1 13281 ChimerSeq FusionScan TCGA_RNA-Seq ODF2L-C11orf49 ODF2L chr1 86861715 - C11orf49 chr11 47159195 + Exonic hg19 STAD TCGA-FP-8209 2 5'UTR-CDS Inter-chr p22.3 p11.2 13282 ChimerSeq FusionScan TCGA_RNA-Seq CLNS1A-NDUFC2 CLNS1A chr11 77333544 - NDUFC2 chr11 77784187 - Exonic hg19 STAD TCGA-RD-A8N4 4 In-Frame Intra-chr q14.1 q14.1 Seq+ 13283 ChimerSeq FusionScan TCGA_RNA-Seq UVRAG-MAP6 UVRAG chr11 75526569 + MAP6 chr11 75317049 - Exonic hg19 STAD TCGA-RD-A8N4 3 In-Frame Intra-chr q13.5 Tumor suppressor gene q13.5 Seq+ 13284 ChimerSeq FusionScan TCGA_RNA-Seq PAK1-C11orf67 PAK1 chr11 77085372 - C11orf67 chr11 77580767 + Exonic hg19 STAD TCGA-RD-A8N4 3 In-Frame Intra-chr q14.1 STE:STE20 Seq+ 13285 ChimerSeq FusionScan TCGA_RNA-Seq UVRAG-MAP6 UVRAG chr11 75526569 + MAP6 chr11 75299229 - Exonic hg19 STAD TCGA-RD-A8N4 3 Out-of-Frame Intra-chr q13.5 Tumor suppressor gene q13.5 Seq+ 13286 ChimerSeq FusionScan TCGA_RNA-Seq WFDC11-RNF115 WFDC11 chr20 44298816 - RNF115 chr1 145646114 + Exonic hg19 STAD TCGA-RD-A8N4 2 5'UTR-CDS Inter-chr q13.12 q21.1 13287 ChimerSeq FusionScan TCGA_RNA-Seq PLXNB1-TNS1 PLXNB1 chr3 48470661 - TNS1 chr2 218686661 - Exonic hg19 STAD TCGA-RD-A8N4 2 5'UTR-CDS Inter-chr p21.31 q35 13288 ChimerSeq FusionScan TCGA_RNA-Seq ZADH2-PPP1R12C ZADH2 chr18 72920804 - PPP1R12C chr19 55607703 - Exonic hg19 STAD TCGA-RD-A8N4 2 Out-of-Frame Inter-chr q22.3 q13.42 13289 ChimerSeq FusionScan TCGA_RNA-Seq UVRAG-CMPK1 UVRAG chr11 75672593 + CMPK1 chr1 47834140 + Exonic hg19 STAD TCGA-RD-A8N4 2 In-Frame Inter-chr q13.5 Tumor suppressor gene p33 Oncogene Seq+ 13290 ChimerSeq FusionScan TCGA_RNA-Seq SLC38A10-C17orf101 SLC38A10 chr17 79225292 - C17orf101 chr17 80369406 - Exonic hg19 STAD TCGA-MX-A663 3 In-Frame Intra-chr q25.3 Seq+ 13291 ChimerSeq FusionScan TCGA_RNA-Seq PPA2-SPATA5 PPA2 chr4 106367539 - SPATA5 chr4 124177170 + Exonic hg19 STAD TCGA-MX-A663 2 In-Frame Intra-chr q24 q28.1 13292 ChimerSeq FusionScan TCGA_RNA-Seq DGKD-INPP5D DGKD chr2 234263320 + INPP5D chr2 234066958 + Exonic hg19 STAD TCGA-MX-A663 2 Out-of-Frame Intra-chr Seq+ 13293 ChimerSeq FusionScan TCGA_RNA-Seq EP400-FUS EP400 chr12 132510349 + FUS chr16 31199645 + Exonic hg19 STAD TCGA-MX-A663 2 In-Frame Inter-chr q24.33 Oncogene p11.2 Tumor suppressor gene 13294 ChimerSeq FusionScan TCGA_RNA-Seq NKD1-ADCY7 NKD1 chr16 50583466 + ADCY7 chr16 50321822 + Exonic hg19 STAD TCGA-BR-8678 13 CDS-3'UTR Intra-chr q12.1 q12.1 Seq+ 13295 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1-NAT8L WHSC1 chr4 1932497 + NAT8L chr4 2062724 + Exonic hg19 STAD TCGA-BR-8678 12 In-Frame Intra-chr Oncogene p16.3 Seq+ 13296 ChimerSeq FusionScan TCGA_RNA-Seq URI1-PLEKHF1 URI1 chr19 30477324 + PLEKHF1 chr19 30164730 + Exonic hg19 STAD TCGA-BR-8678 8 5'UTR-5'UTR Intra-chr q12 q12 Seq+ 13297 ChimerSeq FusionScan TCGA_RNA-Seq FAM20B-RALGPS2 FAM20B chr1 179023773 + RALGPS2 chr1 178846632 + Exonic hg19 STAD TCGA-BR-8678 6 In-Frame Intra-chr q25.2 q25.2 Seq+ 13298 ChimerSeq FusionScan TCGA_RNA-Seq SPECC1L-SMARCB1 SPECC1L chr22 24666951 + SMARCB1 chr22 24133942 + Exonic hg19 STAD TCGA-BR-8678 5 5'UTR-CDS Intra-chr q11.23 q11.23 Oncogene Tumor suppressor gene Seq+ 13299 ChimerSeq FusionScan TCGA_RNA-Seq CPSF1-ARHGAP39 CPSF1 chr8 145634398 - ARHGAP39 chr8 145806661 - Exonic hg19 STAD TCGA-BR-8678 4 Out-of-Frame Intra-chr q24.3 q24.3 Seq+ 13300 ChimerSeq FusionScan TCGA_RNA-Seq NKD1-PAPD5 NKD1 chr16 50583466 + PAPD5 chr16 50248131 + Exonic hg19 STAD TCGA-BR-8678 3 In-Frame Intra-chr q12.1 q12.1 13301 ChimerSeq FusionScan TCGA_RNA-Seq STRN-TPTE2 STRN chr2 37152247 - TPTE2 chr13 20077417 - Exonic hg19 STAD TCGA-BR-8678 3 CDS-5'UTR Inter-chr p22.2 q12.11 Tumor suppressor gene 13302 ChimerSeq FusionScan TCGA_RNA-Seq NKD1-ADCY7 NKD1 chr16 50583466 + ADCY7 chr16 50326586 + Exonic hg19 STAD TCGA-BR-8678 3 CDS-3'UTR Intra-chr q12.1 q12.1 Seq+ 13303 ChimerSeq FusionScan TCGA_RNA-Seq GART-FOXK1 GART chr21 34897075 - FOXK1 chr7 4796624 + Exonic hg19 STAD TCGA-BR-8678 2 Out-of-Frame Inter-chr p22.1 Transcription factor Seq+ 13304 ChimerSeq FusionScan TCGA_RNA-Seq RTF1-H2AFV RTF1 chr15 41730629 + H2AFV chr7 44874161 - Exonic hg19 STAD TCGA-BR-8678 2 In-Frame Inter-chr q15.1 p13 Seq+ 13305 ChimerSeq FusionScan TCGA_RNA-Seq IP6K1-TRAIP IP6K1 chr3 49823786 - TRAIP chr3 49885633 - Exonic hg19 STAD TCGA-BR-8678 2 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 13306 ChimerSeq FusionScan TCGA_RNA-Seq PRR12-NOSIP PRR12 chr19 50094997 + NOSIP chr19 50063949 - Exonic hg19 STAD TCGA-BR-8678 2 CDS-5'UTR Intra-chr q13.33 Transcription factor q13.33 13307 ChimerSeq FusionScan TCGA_RNA-Seq PTK2-PHF20L1 PTK2 chr8 141874410 - PHF20L1 chr8 133836248 + Exonic hg19 STAD TCGA-BR-8678 2 Out-of-Frame Intra-chr q24.3 q24.22 13308 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175394270 - Exonic hg19 STAD TCGA-BR-8678 2 5'UTR-CDS Inter-chr q21.1 q35.2 13309 ChimerSeq FusionScan TCGA_RNA-Seq ZNF280D-CYFIP1 ZNF280D chr15 57025655 - CYFIP1 chr15 22990056 + Exonic hg19 STAD TCGA-BR-8678 2 5'UTR-CDS Intra-chr q21.3 Transcription factor q11.2 13310 ChimerSeq FusionScan TCGA_RNA-Seq URI1-PLEKHF1 URI1 chr19 30433571 + PLEKHF1 chr19 30164730 + Exonic hg19 STAD TCGA-BR-8678 2 5'UTR-5'UTR Intra-chr q12 q12 Seq+ 13311 ChimerSeq FusionScan TCGA_RNA-Seq WDFY2-FOXO1 WDFY2 chr13 52158960 + FOXO1 chr13 41134997 - Exonic hg19 STAD TCGA-BR-8678 2 Out-of-Frame Intra-chr q14.3 q14.11 Oncogene Tumor suppressor gene Transcription factor Seq+ 13312 ChimerSeq FusionScan TCGA_RNA-Seq ITPR2-RAD17 ITPR2 chr12 26553060 - RAD17 chr5 68706319 + Exonic hg19 STAD TCGA-BR-8678 2 Out-of-Frame Inter-chr p11.23 Seq+ 13313 ChimerSeq FusionScan TCGA_RNA-Seq B9D1-INTS1 B9D1 chr17 19250581 - INTS1 chr7 1512022 - Exonic hg19 STAD TCGA-BR-A4QL 3 In-Frame Inter-chr p11.2 p22.3 13314 ChimerSeq FusionScan TCGA_RNA-Seq ECHDC2-FCGRT ECHDC2 chr1 53387224 - FCGRT chr19 50029266 + Exonic hg19 STAD TCGA-BR-A4QL 2 In-Frame Inter-chr p32.3 q13.33 13315 ChimerSeq FusionScan TCGA_RNA-Seq CIRBP-WNK2 CIRBP chr19 1272050 + WNK2 chr9 96079801 + Exonic hg19 STAD TCGA-BR-A4QL 2 Out-of-Frame Inter-chr p13.3 q22.31 Tumor suppressor gene 13316 ChimerSeq FusionScan TCGA_RNA-Seq RPL34-CYB5R1 RPL34 chr4 109543774 + CYB5R1 chr1 202932855 - Exonic hg19 STAD TCGA-BR-4267 2 Out-of-Frame Inter-chr q25 q32.1 13317 ChimerSeq FusionScan TCGA_RNA-Seq GLRX3-PPM1G GLRX3 chr10 131943583 + PPM1G chr2 27610025 - Exonic hg19 STAD TCGA-BR-4267 2 In-Frame Inter-chr q26.3 p23.3 13318 ChimerSeq FusionScan TCGA_RNA-Seq CHMP3-EPB41L5 CHMP3 chr2 86790426 - EPB41L5 chr2 120900578 + Exonic hg19 STAD TCGA-BR-4267 2 In-Frame Intra-chr p11.2 q14.2 13319 ChimerSeq FusionScan TCGA_RNA-Seq SYMPK-NDUFV2 SYMPK chr19 46324641 - NDUFV2 chr18 9124871 + Exonic hg19 STAD TCGA-BR-4267 2 In-Frame Inter-chr q13.32 p11.22 13320 ChimerSeq FusionScan TCGA_RNA-Seq AVL9-ICA1 AVL9 chr7 32535414 + ICA1 chr7 8167772 - Exonic hg19 STAD TCGA-BR-4267 2 Out-of-Frame Intra-chr p14.3 p21.3 13321 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-CNBP TBL1XR1 chr3 176914908 - CNBP chr3 128890614 - Exonic hg19 STAD TCGA-HU-A4GY 3 5'UTR-5'UTR Intra-chr q26.32 q21.3 13322 ChimerSeq FusionScan TCGA_RNA-Seq GOLGA4-TATDN2 GOLGA4 chr3 37292975 + TATDN2 chr3 10318044 + Exonic hg19 STAD TCGA-HU-A4GY 2 In-Frame Intra-chr p22.2 p25.3 13323 ChimerSeq FusionScan TCGA_RNA-Seq MRPL35-ADK MRPL35 chr2 86437736 + ADK chr10 76349039 + Exonic hg19 STAD TCGA-HU-A4GY 2 Out-of-Frame Inter-chr p11.2 q22.2 13324 ChimerSeq FusionScan TCGA_RNA-Seq PAPLN-COL6A2 PAPLN chr14 73732215 + COL6A2 chr21 47533921 + Exonic hg19 STAD TCGA-HU-A4GY 2 Out-of-Frame Inter-chr q24.2 q22.3 13325 ChimerSeq FusionScan TCGA_RNA-Seq XRN1-DAZAP2 XRN1 chr3 142166711 - DAZAP2 chr12 51634654 + Exonic hg19 STAD TCGA-HU-A4GY 2 In-Frame Inter-chr q23 q13.13 Seq+ 13326 ChimerSeq FusionScan TCGA_RNA-Seq IRAK4-HN1 IRAK4 chr12 44152819 + HN1 chr17 73132345 - Exonic hg19 STAD TCGA-HU-A4GY 2 5'UTR-CDS Inter-chr q12 TKL:IRAK 13327 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175394270 - Exonic hg19 STAD TCGA-HU-A4GY 2 5'UTR-CDS Inter-chr q21.1 q35.2 13328 ChimerSeq FusionScan TCGA_RNA-Seq MYO5A-B2M MYO5A chr15 52820976 - B2M chr15 45007620 + Exonic hg19 STAD TCGA-HU-A4GY 2 Out-of-Frame Intra-chr q21.2 Oncogene 13329 ChimerSeq FusionScan TCGA_RNA-Seq ABCF1-MGAT4A ABCF1 chr6 30539337 + MGAT4A chr2 99343030 - Exonic hg19 STAD TCGA-HU-A4GY 2 CDS-5'UTR Inter-chr q11.2 13330 ChimerSeq FusionScan TCGA_RNA-Seq PLAU-MPHOSPH8 PLAU chr10 75672080 + MPHOSPH8 chr13 20245345 + Exonic hg19 STAD TCGA-HU-A4GY 2 Out-of-Frame Inter-chr q22.2 q12.11 Seq+ 13331 ChimerSeq FusionScan TCGA_RNA-Seq DHRSX-PPP6R3 DHRSX chrY 2276785 - PPP6R3 chr11 68341576 + Exonic hg19 STAD TCGA-HU-A4GY 2 In-Frame Inter-chr p22.33 q13.2 Seq+ 13332 ChimerSeq FusionScan TCGA_RNA-Seq IGSF1-LRPPRC IGSF1 chrX 130420578 - LRPPRC chr2 44139697 - Exonic hg19 STAD TCGA-BR-6452 2 In-Frame Inter-chr q26.2 p21 13333 ChimerSeq FusionScan TCGA_RNA-Seq PRPF4B-PTP4A1 PRPF4B chr6 4059048 + PTP4A1 chr6 64286340 + Exonic hg19 STAD TCGA-BR-6452 2 CDS-5'UTR Intra-chr p25.2 q12 13334 ChimerSeq FusionScan TCGA_RNA-Seq SLCO4A1-DAZAP1 SLCO4A1 chr20 61273905 + DAZAP1 chr19 1417498 + Exonic hg19 STAD TCGA-BR-6452 2 5'UTR-CDS Inter-chr q13.33 p13.3 13335 ChimerSeq FusionScan TCGA_RNA-Seq CD63-LAMA3 CD63 chr12 56120673 - LAMA3 chr18 21487719 + Exonic hg19 STAD TCGA-BR-6452 2 Out-of-Frame Inter-chr q13.2 q11.2 13336 ChimerSeq FusionScan TCGA_RNA-Seq MUC5B-PFKL MUC5B chr11 1256643 + PFKL chr21 45746597 + Exonic hg19 STAD TCGA-BR-6452 2 Out-of-Frame Inter-chr p15.5 q22.3 13337 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-MX1 TMPRSS2 chr21 42845251 - MX1 chr21 42802459 + Exonic hg19 STAD TCGA-VQ-A8PJ 5 CDS-5'UTR Intra-chr q22.3 q22.3 Seq+ 13338 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 STAD TCGA-VQ-A8PJ 3 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 13339 ChimerSeq FusionScan TCGA_RNA-Seq HDAC7-COL2A1 HDAC7 chr12 48213549 - COL2A1 chr12 48393908 - Exonic hg19 STAD TCGA-VQ-A8PJ 3 In-Frame Intra-chr q13.11 q13.11 Seq+ 13340 ChimerSeq FusionScan TCGA_RNA-Seq DDX5-SKAP1 DDX5 chr17 62496666 - SKAP1 chr17 46474147 - Exonic hg19 STAD TCGA-VQ-A8PJ 3 In-Frame Intra-chr q23.3 q21.32 Seq+ 13341 ChimerSeq FusionScan TCGA_RNA-Seq POLD3-MANBAL POLD3 chr11 74315839 + MANBAL chr20 35929610 + Exonic hg19 STAD TCGA-VQ-A8PJ 2 5'UTR-5'UTR Inter-chr q13.4 q11.23 13342 ChimerSeq FusionScan TCGA_RNA-Seq POLD3-MANBAL POLD3 chr11 74315839 + MANBAL chr20 35927165 + Exonic hg19 STAD TCGA-VQ-A8PJ 2 5'UTR-5'UTR Inter-chr q13.4 q11.23 13343 ChimerSeq FusionScan TCGA_RNA-Seq MED15-FKBP10 MED15 chr22 20891491 + FKBP10 chr17 39977905 + Exonic hg19 STAD TCGA-VQ-A8PJ 2 Out-of-Frame Inter-chr q11.21 q21.2 Seq+ 13344 ChimerSeq FusionScan TCGA_RNA-Seq CDC123-RAB18 CDC123 chr10 12252321 + RAB18 chr10 27798803 + Exonic hg19 STAD TCGA-BR-4253 2 Out-of-Frame Intra-chr p14 p12.1 Seq+ 13345 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-EIF4A1 RCC1 chr1 28832596 + EIF4A1 chr17 7478436 + Exonic hg19 STAD TCGA-BR-4253 2 5'UTR-CDS Inter-chr p35.3 p13.1 13346 ChimerSeq FusionScan TCGA_RNA-Seq ZFP64-CSE1L ZFP64 chr20 50808129 - CSE1L chr20 47700562 + Exonic hg19 STAD TCGA-RD-A8MW 11 Out-of-Frame Intra-chr q13.2 Transcription factor q13.13 Seq+ 13347 ChimerSeq FusionScan TCGA_RNA-Seq ZC3H7A-SYT13 ZC3H7A chr16 11862170 - SYT13 chr11 45268063 - Exonic hg19 STAD TCGA-RD-A8MW 6 Out-of-Frame Inter-chr p13.13 p11.2 Tumor suppressor gene Seq+ 13348 ChimerSeq FusionScan TCGA_RNA-Seq ANKIB1-TNFRSF17 ANKIB1 chr7 91875833 + TNFRSF17 chr16 12060051 + Exonic hg19 STAD TCGA-RD-A8MW 5 5'UTR-CDS Inter-chr q21.2 p13.13 Seq+ 13349 ChimerSeq FusionScan TCGA_RNA-Seq LITAF-BCAR4 LITAF chr16 11680741 - BCAR4 chr16 11914154 - Exonic hg19 STAD TCGA-RD-A8MW 4 5'UTR-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 13350 ChimerSeq FusionScan TCGA_RNA-Seq RERE-TPM3 RERE chr1 8674619 - TPM3 chr1 154148724 - Exonic hg19 STAD TCGA-RD-A8MW 4 In-Frame Intra-chr p36.23 q21.3 Seq+ 13351 ChimerSeq FusionScan TCGA_RNA-Seq SEC63-PCBP2 SEC63 chr6 108214685 - PCBP2 chr12 53853055 + Exonic hg19 STAD TCGA-RD-A8MW 3 In-Frame Inter-chr q21 q13.13 Seq+ 13352 ChimerSeq FusionScan TCGA_RNA-Seq MDM2-FAM193B MDM2 chr12 69214154 + FAM193B chr5 176949072 - Exonic hg19 STAD TCGA-RD-A8MW 2 Out-of-Frame Inter-chr q15 Oncogene q35.3 13353 ChimerSeq FusionScan TCGA_RNA-Seq SAR1A-LLGL2 SAR1A chr10 71930168 - LLGL2 chr17 73539477 + Exonic hg19 STAD TCGA-RD-A8MW 2 5'UTR-5'UTR Inter-chr q22.1 q25.1 13354 ChimerSeq FusionScan TCGA_RNA-Seq ZNF174-SMAD4 ZNF174 chr16 3454648 + SMAD4 chr18 48586235 + Exonic hg19 STAD TCGA-RD-A8MW 2 In-Frame Inter-chr p13.3 Transcription factor q21.2 Oncogene Tumor suppressor gene Transcription factor 13355 ChimerSeq FusionScan TCGA_RNA-Seq LYST-GPR137B LYST chr1 236030142 - GPR137B chr1 236368425 + Exonic hg19 STAD TCGA-RD-A8MW 2 5'UTR-CDS Intra-chr q42.3 q42.3 13356 ChimerSeq FusionScan TCGA_RNA-Seq NPAS2-GLTSCR2 NPAS2 chr2 101554304 + GLTSCR2 chr19 48250223 + Exonic hg19 STAD TCGA-RD-A8MW 2 Out-of-Frame Inter-chr q11.2 Tumor suppressor gene Transcription factor Tumor suppressor gene 13357 ChimerSeq FusionScan TCGA_RNA-Seq NRF1-UBE2H NRF1 chr7 129330386 + UBE2H chr7 129520811 - Exonic hg19 STAD TCGA-RD-A8MW 2 Out-of-Frame Intra-chr q32.2 Tumor suppressor gene Transcription factor q32.2 13358 ChimerSeq FusionScan TCGA_RNA-Seq BLCAP-ADK BLCAP chr20 36156194 - ADK chr10 76429940 + Exonic hg19 STAD TCGA-RD-A8MW 2 5'UTR-CDS Inter-chr q11.23 Tumor suppressor gene q22.2 13359 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D8-RNF149 TBC1D8 chr2 101675882 - RNF149 chr2 101902639 - Exonic hg19 STAD TCGA-RD-A8MW 2 Out-of-Frame Intra-chr q11.2 q11.2 Seq+ 13360 ChimerSeq FusionScan TCGA_RNA-Seq ZFP64-CSE1L ZFP64 chr20 50808129 - CSE1L chr20 47705783 + Exonic hg19 STAD TCGA-RD-A8MW 2 Out-of-Frame Intra-chr q13.2 Transcription factor q13.13 Seq+ 13361 ChimerSeq FusionScan TCGA_RNA-Seq TMEM50A-SAP130 TMEM50A chr1 25678184 + SAP130 chr2 128712918 - Exonic hg19 STAD TCGA-RD-A8MW 2 Out-of-Frame Inter-chr p36.11 q14.3 13362 ChimerSeq FusionScan TCGA_RNA-Seq ATG5-SEC63 ATG5 chr6 106696024 - SEC63 chr6 108250718 - Exonic hg19 STAD TCGA-RD-A8MW 2 Out-of-Frame Intra-chr q21 q21 13363 ChimerSeq FusionScan TCGA_RNA-Seq NEDD4L-SMAD2 NEDD4L chr18 55711940 + SMAD2 chr18 45368321 - Exonic hg19 STAD TCGA-RD-A8MW 2 Out-of-Frame Intra-chr q21.31 Tumor suppressor gene q21.1 Oncogene Tumor suppressor gene 13364 ChimerSeq FusionScan TCGA_RNA-Seq PPIG-ADNP PPIG chr2 170441000 + ADNP chr20 49520538 - Exonic hg19 STAD TCGA-RD-A8MW 2 5'UTR-5'UTR Inter-chr q31.1 q13.13 Transcription factor 13365 ChimerSeq FusionScan TCGA_RNA-Seq LITAF-BCAR4 LITAF chr16 11680741 - BCAR4 chr16 11915612 - Exonic hg19 STAD TCGA-RD-A8MW 2 5'UTR-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 13366 ChimerSeq FusionScan TCGA_RNA-Seq CSGALNACT1-DYSF CSGALNACT1 chr8 19459281 - DYSF chr2 71906186 + Exonic hg19 STAD TCGA-RD-A8MW 2 5'UTR-CDS Inter-chr p21.3 p13.2 13367 ChimerSeq FusionScan TCGA_RNA-Seq KANSL1-AHNAK KANSL1 chr17 44143902 - AHNAK chr11 62259303 - Exonic hg19 STAD TCGA-HU-8604 4 Out-of-Frame Inter-chr q12.3 Tumor suppressor gene Seq+ 13368 ChimerSeq FusionScan TCGA_RNA-Seq ADD3-VIL1 ADD3 chr10 111877180 + VIL1 chr2 219305444 + Exonic hg19 STAD TCGA-HU-8604 3 In-Frame Inter-chr q25.1 q35 Tumor suppressor gene 13369 ChimerSeq FusionScan TCGA_RNA-Seq KDM4C-KIAA1432 KDM4C chr9 6888063 + KIAA1432 chr9 5689958 + Exonic hg19 STAD TCGA-HU-8604 2 In-Frame Intra-chr p24.1 13370 ChimerSeq FusionScan TCGA_RNA-Seq RPL41-GRB7 RPL41 chr12 56510583 + GRB7 chr17 37898504 + Exonic hg19 STAD TCGA-HU-8604 2 Out-of-Frame Inter-chr q13.2 q12 13371 ChimerSeq FusionScan TCGA_RNA-Seq TRIO-TBC1D8 TRIO chr5 14472767 + TBC1D8 chr2 101648847 - Exonic hg19 STAD TCGA-HU-8604 2 In-Frame Inter-chr p15.2 q11.2 13372 ChimerSeq FusionScan TCGA_RNA-Seq PLD1-ZBTB7A PLD1 chr3 171528188 - ZBTB7A chr19 4055245 - Exonic hg19 STAD TCGA-HU-8604 2 5'UTR-5'UTR Inter-chr q26.31 Tumor suppressor gene p13.3 Transcription factor 13373 ChimerSeq FusionScan TCGA_RNA-Seq CORO1C-NDUFB2 CORO1C chr12 109125204 - NDUFB2 chr7 140402665 + Exonic hg19 STAD TCGA-HU-8604 2 5'UTR-CDS Inter-chr q24.11 q34 13374 ChimerSeq FusionScan TCGA_RNA-Seq FDXR-TMSB15B FDXR chr17 72868160 - TMSB15B chrX 103219078 + Exonic hg19 STAD TCGA-HU-8604 2 CDS-5'UTR Inter-chr q25.1 q22.2 13375 ChimerSeq FusionScan TCGA_RNA-Seq TFDP1-MCF2L TFDP1 chr13 114240164 + MCF2L chr13 113669076 + Exonic hg19 STAD TCGA-BR-8380 3 Out-of-Frame Intra-chr q34 Transcription factor q34 13376 ChimerSeq FusionScan TCGA_RNA-Seq NBAS-SRPK1 NBAS chr2 15514731 - SRPK1 chr6 35837678 - Exonic hg19 STAD TCGA-BR-8380 2 In-Frame Inter-chr p24.3 p21.31 CMGC:SRPK 13377 ChimerSeq FusionScan TCGA_RNA-Seq RAB4A-ANGEL2 RAB4A chr1 229438736 + ANGEL2 chr1 213173725 - Exonic hg19 STAD TCGA-BR-8380 2 3'UTR-CDS Intra-chr q42.13 q32.3 13378 ChimerSeq FusionScan TCGA_RNA-Seq CASC3-TMEM99 CASC3 chr17 38297860 + TMEM99 chr17 38989366 + Exonic hg19 STAD TCGA-BR-A44U 6 CDS-5'UTR Intra-chr q21.1 q21.2 Seq+ 13379 ChimerSeq FusionScan TCGA_RNA-Seq RSF1-RPLP2 RSF1 chr11 77436589 - RPLP2 chr11 812759 + Exonic hg19 STAD TCGA-BR-A44U 2 CDS-5'UTR Intra-chr q14.1 p15.5 13380 ChimerSeq FusionScan TCGA_RNA-Seq CD46-MAPKAPK2 CD46 chr1 207959027 + MAPKAPK2 chr1 206902054 + Exonic hg19 STAD TCGA-CG-4449 6 Out-of-Frame Intra-chr q32.2 q32.1 CAMK:MAPKAPK Seq+ 13381 ChimerSeq FusionScan TCGA_RNA-Seq EPS15L1-AKAP8 EPS15L1 chr19 16539512 - AKAP8 chr19 15485446 - Exonic hg19 STAD TCGA-CG-4449 4 Out-of-Frame Intra-chr p13.11 p13.12 Transcription factor Seq+ 13382 ChimerSeq FusionScan TCGA_RNA-Seq DDX10-ATM DDX10 chr11 108594189 + ATM chr11 108235808 + Exonic hg19 STAD TCGA-CG-4449 3 In-Frame Intra-chr q22.3 q22.3 Atypical:PIKK Oncogene Tumor suppressor gene Seq+ 13383 ChimerSeq FusionScan TCGA_RNA-Seq METTL5-TLK1 METTL5 chr2 170680998 - TLK1 chr2 171914707 - Exonic hg19 STAD TCGA-CG-4449 3 In-Frame Intra-chr q31.1 q31.1 Other:TLK Seq+ 13384 ChimerSeq FusionScan TCGA_RNA-Seq ENAH-LEFTY2 ENAH chr1 225840387 - LEFTY2 chr1 226127702 - Exonic hg19 STAD TCGA-CG-4449 2 Out-of-Frame Intra-chr q42.12 q42.12 Tumor suppressor gene 13385 ChimerSeq FusionScan TCGA_RNA-Seq VPS8-EIF2AK4 VPS8 chr3 184588593 + EIF2AK4 chr15 40318177 + Exonic hg19 STAD TCGA-CG-4449 2 In-Frame Inter-chr q27.2 q15.1 Seq+ 13386 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-CDK12 GRB7 chr17 37902455 + CDK12 chr17 37680926 + Exonic hg19 STAD TCGA-CG-4449 2 Out-of-Frame Intra-chr q12 q12 Oncogene Seq+ 13387 ChimerSeq FusionScan TCGA_RNA-Seq BLM-ABHD2 BLM chr15 91260671 + ABHD2 chr15 89694907 + Exonic hg19 STAD TCGA-CG-4449 2 5'UTR-CDS Intra-chr q26.1 Oncogene Tumor suppressor gene q26.1 Seq+ 13388 ChimerSeq FusionScan TCGA_RNA-Seq CHMP4B-CBFA2T2 CHMP4B chr20 32399464 + CBFA2T2 chr20 32194761 + Exonic hg19 STAD TCGA-CG-4449 2 In-Frame Intra-chr q11.22 q11.21 Seq+ 13389 ChimerSeq FusionScan TCGA_RNA-Seq B4GALT1-CLTA B4GALT1 chr9 33166755 - CLTA chr9 36197547 + Exonic hg19 STAD TCGA-HU-8608 2 In-Frame Intra-chr p21.1 p13.3 13390 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD40-POLDIP2 ANKRD40 chr17 48777928 - POLDIP2 chr17 26678826 - Exonic hg19 STAD TCGA-D7-A747 3 In-Frame Intra-chr q21.33 q11.2 13391 ChimerSeq FusionScan TCGA_RNA-Seq DCTN6-RBPMS DCTN6 chr8 30021691 + RBPMS chr8 30361802 + Exonic hg19 STAD TCGA-D7-A747 2 Out-of-Frame Intra-chr p12 p12 13392 ChimerSeq FusionScan TCGA_RNA-Seq PICALM-ZSCAN20 PICALM chr11 85685750 - ZSCAN20 chr1 33954064 + Exonic hg19 STAD TCGA-D7-A747 2 In-Frame Inter-chr q14.2 p35.1 Transcription factor 13393 ChimerSeq FusionScan TCGA_RNA-Seq WIPF1-UXT WIPF1 chr2 175547501 - UXT chrX 47511543 - Exonic hg19 STAD TCGA-D7-A747 2 5'UTR-CDS Inter-chr q31.1 p11.23 13394 ChimerSeq FusionScan TCGA_RNA-Seq PARD3-ARHGAP12 PARD3 chr10 35103803 - ARHGAP12 chr10 32132514 - Exonic hg19 STAD TCGA-D7-6528 8 In-Frame Intra-chr p11.21 p11.22 Seq+ 13395 ChimerSeq FusionScan TCGA_RNA-Seq ITCH-DYNLRB1 ITCH chr20 33012331 + DYNLRB1 chr20 33114072 + Exonic hg19 STAD TCGA-D7-6528 6 Out-of-Frame Intra-chr q11.22 q11.22 Seq+ 13396 ChimerSeq FusionScan TCGA_RNA-Seq SPEN-PLEKHM2 SPEN chr1 16174645 + PLEKHM2 chr1 16042731 + Exonic hg19 STAD TCGA-D7-6528 3 Out-of-Frame Intra-chr p36.21 Transcription factor p36.21 Seq+ 13397 ChimerSeq FusionScan TCGA_RNA-Seq PTK2-TRAPPC9 PTK2 chr8 142011223 - TRAPPC9 chr8 141034176 - Exonic hg19 STAD TCGA-D7-6528 3 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 13398 ChimerSeq FusionScan TCGA_RNA-Seq TESC-KLK1 TESC chr12 117513075 - KLK1 chr19 51323699 - Exonic hg19 STAD TCGA-D7-6528 2 In-Frame Inter-chr q24.22 q13.33 13399 ChimerSeq FusionScan TCGA_RNA-Seq ITCH-DYNLRB1 ITCH chr20 33001685 + DYNLRB1 chr20 33114072 + Exonic hg19 STAD TCGA-D7-6528 2 Out-of-Frame Intra-chr q11.22 q11.22 Seq+ 13400 ChimerSeq FusionScan TCGA_RNA-Seq BICD2-IPPK BICD2 chr9 95477534 - IPPK chr9 95420963 - Exonic hg19 STAD TCGA-D7-6528 2 In-Frame Intra-chr q22.31 q22.31 13401 ChimerSeq FusionScan TCGA_RNA-Seq ADAP1-SUN1 ADAP1 chr7 959604 - SUN1 chr7 908985 + Exonic hg19 STAD TCGA-D7-6528 2 Out-of-Frame Intra-chr p22.3 p22.3 Seq+ 13402 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0907-MRPS15 KIAA0907 chr1 155899086 - MRPS15 chr1 36923582 - Exonic hg19 STAD TCGA-D7-6528 2 Out-of-Frame Intra-chr q22 p34.3 13403 ChimerSeq FusionScan TCGA_RNA-Seq AGAP1-NAA35 AGAP1 chr2 236659132 + NAA35 chr9 88611313 + Exonic hg19 STAD TCGA-D7-6818 7 In-Frame Inter-chr q37.2 q21.33 Seq+ 13404 ChimerSeq FusionScan TCGA_RNA-Seq TRIT1-IL22RA1 TRIT1 chr1 40348989 - IL22RA1 chr1 24454769 - Exonic hg19 STAD TCGA-D7-6818 2 In-Frame Intra-chr p34.2 Tumor suppressor gene p36.11 13405 ChimerSeq FusionScan TCGA_RNA-Seq MEGF6-PCNXL3 MEGF6 chr1 3418359 - PCNXL3 chr11 65385410 + Exonic hg19 STAD TCGA-D7-6818 2 In-Frame Inter-chr p36.32 13406 ChimerSeq FusionScan TCGA_RNA-Seq DHX30-SMARCC1 DHX30 chr3 47844702 + SMARCC1 chr3 47680270 - Exonic hg19 STAD TCGA-D7-6818 2 5'UTR-CDS Intra-chr p21.31 p21.31 Tumor suppressor gene 13407 ChimerSeq FusionScan TCGA_RNA-Seq ZWINT-FAM195B ZWINT chr10 58120956 - FAM195B chr17 79782430 - Exonic hg19 STAD TCGA-D7-6818 2 CDS-5'UTR Inter-chr q21.1 13408 ChimerSeq FusionScan TCGA_RNA-Seq URI1-PLEKHF1 URI1 chr19 30477324 + PLEKHF1 chr19 30164730 + Exonic hg19 STAD TCGA-VQ-A8E2 12 5'UTR-5'UTR Intra-chr q12 q12 Seq+ 13409 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-PTK2 PVT1 chr8 128951922 + PTK2 chr8 141900868 - Exonic hg19 STAD TCGA-VQ-A8E2 5 5'UTR-5'UTR Intra-chr q24.21 q24.3 Seq+ 13410 ChimerSeq FusionScan TCGA_RNA-Seq ASXL1-TM9SF4 ASXL1 chr20 30956926 + TM9SF4 chr20 30720815 + Exonic hg19 STAD TCGA-VQ-A8E2 5 In-Frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 13411 ChimerSeq FusionScan TCGA_RNA-Seq SORBS1-TCTN3 SORBS1 chr10 97321076 - TCTN3 chr10 97440366 - Exonic hg19 STAD TCGA-VQ-A8E2 4 5'UTR-CDS Intra-chr q24.1 q24.1 Seq+ 13412 ChimerSeq FusionScan TCGA_RNA-Seq HIST1H2BD-MDN1 HIST1H2BD chr6 26158787 + MDN1 chr6 90360566 - Exonic hg19 STAD TCGA-VQ-A8E2 4 3'UTR-CDS Intra-chr p22.2 q15 Seq+ 13413 ChimerSeq FusionScan TCGA_RNA-Seq DCUN1D2-URI1 DCUN1D2 chr13 114144981 - URI1 chr19 30476129 + Exonic hg19 STAD TCGA-VQ-A8E2 2 Out-of-Frame Inter-chr q34 q12 13414 ChimerSeq FusionScan TCGA_RNA-Seq ZZZ3-UBAP2L ZZZ3 chr1 78148269 - UBAP2L chr1 154197559 + Exonic hg19 STAD TCGA-VQ-A8E2 2 5'UTR-5'UTR Intra-chr p31.1 Transcription factor q21.3 13415 ChimerSeq FusionScan TCGA_RNA-Seq DPY19L2-UACA DPY19L2 chr12 63987866 - UACA chr15 70991999 - Exonic hg19 STAD TCGA-VQ-A8E2 2 Out-of-Frame Inter-chr q14.2 q23 13416 ChimerSeq FusionScan TCGA_RNA-Seq SBNO2-EFNA2 SBNO2 chr19 1147307 - EFNA2 chr19 1298549 + Exonic hg19 STAD TCGA-VQ-A8E2 2 Out-of-Frame Intra-chr p13.3 p13.3 13417 ChimerSeq FusionScan TCGA_RNA-Seq PTK2-PVT1 PTK2 chr8 141900641 - PVT1 chr8 129108763 + Exonic hg19 STAD TCGA-VQ-A8E2 2 CDS-5'UTR Intra-chr q24.3 q24.21 Seq+ 13418 ChimerSeq FusionScan TCGA_RNA-Seq ZNF512-WWTR1 ZNF512 chr2 27806009 + WWTR1 chr3 149387678 - Exonic hg19 STAD TCGA-VQ-A8E2 2 CDS-5'UTR Inter-chr p23.3 Transcription factor q25.1 13419 ChimerSeq FusionScan TCGA_RNA-Seq SEC31A-RAB4B SEC31A chr4 83765538 - RAB4B chr19 41285923 + Exonic hg19 STAD TCGA-VQ-A8E2 2 In-Frame Inter-chr q21.22 q13.2 13420 ChimerSeq FusionScan TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152498705 + Exonic hg19 STAD TCGA-VQ-A8E2 2 In-Frame Intra-chr q36.1 Seq+ 13421 ChimerSeq FusionScan TCGA_RNA-Seq PPP4C-ASPHD1 PPP4C chr16 30087796 + ASPHD1 chr16 29916172 + Exonic hg19 STAD TCGA-F1-A448 3 Out-of-Frame Intra-chr p11.2 p11.2 13422 ChimerSeq FusionScan TCGA_RNA-Seq TMED10-THBS1 TMED10 chr14 75614366 - THBS1 chr15 39880242 + Exonic hg19 STAD TCGA-F1-A448 2 Out-of-Frame Inter-chr q24.3 q14 Oncogene Tumor suppressor gene 13423 ChimerSeq FusionScan TCGA_RNA-Seq GK5-MED6 GK5 chr3 141906545 - MED6 chr14 71064494 - Exonic hg19 STAD TCGA-F1-A448 2 In-Frame Inter-chr q23 q24.2 13424 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB25-TYW5 ZBTB25 chr14 64957078 - TYW5 chr2 200800770 - Exonic hg19 STAD TCGA-F1-A448 2 Out-of-Frame Inter-chr q23.3 Transcription factor q33.1 13425 ChimerSeq FusionScan TCGA_RNA-Seq PTK2-EIF4G3 PTK2 chr8 142011223 - EIF4G3 chr1 21415706 - Exonic hg19 STAD TCGA-F1-A448 2 5'UTR-5'UTR Inter-chr q24.3 p36.12 13426 ChimerSeq FusionScan TCGA_RNA-Seq CABIN1-KIAA1671 CABIN1 chr22 24487797 + KIAA1671 chr22 25445196 + Exonic hg19 STAD TCGA-F1-A448 2 In-Frame Intra-chr q11.23 13427 ChimerSeq FusionScan TCGA_RNA-Seq CNRIP1-IPO11 CNRIP1 chr2 68544288 - IPO11 chr5 61887403 + Exonic hg19 STAD TCGA-F1-A448 2 Out-of-Frame Inter-chr p14 q12.1 13428 ChimerSeq FusionScan TCGA_RNA-Seq UAP1-GIGYF2 UAP1 chr1 162536138 + GIGYF2 chr2 233671200 + Exonic hg19 STAD TCGA-F1-A448 2 In-Frame Inter-chr q23.3 q37.1 13429 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-QRSL1 PVT1 chr8 128806980 + QRSL1 chr6 107110854 + Exonic hg19 STAD TCGA-CD-8528 387 5'UTR-CDS Inter-chr q24.21 q21 Seq+ 13430 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-QRSL1 PVT1 chr8 128806980 + QRSL1 chr6 107113656 + Exonic hg19 STAD TCGA-CD-8528 16 5'UTR-CDS Inter-chr q24.21 q21 Seq+ 13431 ChimerSeq FusionScan TCGA_RNA-Seq QRSL1-CD24 QRSL1 chr6 107077580 + CD24 chrY 21154705 - Exonic hg19 STAD TCGA-CD-8528 16 CDS-5'UTR Inter-chr q21 q21 Seq+ 13432 ChimerSeq FusionScan TCGA_RNA-Seq OCLN-ARHGAP26 OCLN chr5 68809936 + ARHGAP26 chr5 142393644 + Exonic hg19 STAD TCGA-CD-8528 13 In-Frame Intra-chr q13.2 q31.3 Seq+ 13433 ChimerSeq FusionScan TCGA_RNA-Seq CAST-OCLN CAST chr5 96064913 + OCLN chr5 68830520 + Exonic hg19 STAD TCGA-CD-8528 8 In-Frame Intra-chr q15 q13.2 Seq+ 13434 ChimerSeq FusionScan TCGA_RNA-Seq ATG5-PVT1 ATG5 chr6 106649846 - PVT1 chr8 128902834 + Exonic hg19 STAD TCGA-CD-8528 7 CDS-5'UTR Inter-chr q21 q24.21 Seq+ 13435 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP26-CAST ARHGAP26 chr5 142311690 + CAST chr5 96011242 + Exonic hg19 STAD TCGA-CD-8528 3 In-Frame Intra-chr q31.3 q15 Seq+ 13436 ChimerSeq FusionScan TCGA_RNA-Seq IGF1R-SLC7A5 IGF1R chr15 99192904 + SLC7A5 chr16 87874761 - Exonic hg19 STAD TCGA-CD-8528 2 In-Frame Inter-chr q26.3 TK:InsR Oncogene q24.2 13437 ChimerSeq FusionScan TCGA_RNA-Seq CASC4-APBA2 CASC4 chr15 44615217 + APBA2 chr15 29287955 + Exonic hg19 STAD TCGA-CD-8528 2 CDS-5'UTR Intra-chr q15.3 13438 ChimerSeq FusionScan TCGA_RNA-Seq BLM-ZNF592 BLM chr15 91310253 + ZNF592 chr15 85307937 + Exonic hg19 STAD TCGA-CD-8528 2 CDS-5'UTR Intra-chr q26.1 Oncogene Tumor suppressor gene q25.3 Transcription factor 13439 ChimerSeq FusionScan TCGA_RNA-Seq RAB3D-MLLT1 RAB3D chr19 11446122 - MLLT1 chr19 6227113 - Exonic hg19 STAD TCGA-CD-5800 7 Out-of-Frame Intra-chr p13.2 p13.3 Seq+ 13440 ChimerSeq FusionScan TCGA_RNA-Seq PAK1-INTS4 PAK1 chr11 77184596 - INTS4 chr11 77618856 - Exonic hg19 STAD TCGA-CD-5800 7 5'UTR-CDS Intra-chr q14.1 STE:STE20 q14.1 Seq+ 13441 ChimerSeq FusionScan TCGA_RNA-Seq SIPA1L3-DPF1 SIPA1L3 chr19 38633350 + DPF1 chr19 38704396 - Exonic hg19 STAD TCGA-CD-5800 4 Out-of-Frame Intra-chr q13.13 q13.2 Transcription factor Seq+ 13442 ChimerSeq FusionScan TCGA_RNA-Seq EIF2S1-RAD51B EIF2S1 chr14 67847482 + RAD51B chr14 68758600 + Exonic hg19 STAD TCGA-CD-5800 3 Out-of-Frame Intra-chr q23.3 q24.1 Seq+ 13443 ChimerSeq FusionScan TCGA_RNA-Seq MGRN1-DNAJA3 MGRN1 chr16 4733933 + DNAJA3 chr16 4496886 + Exonic hg19 STAD TCGA-CD-5800 3 Out-of-Frame Intra-chr p13.3 Tumor suppressor gene Seq+ 13444 ChimerSeq FusionScan TCGA_RNA-Seq CHST11-MAP4 CHST11 chr12 104851307 + MAP4 chr3 47919013 - Exonic hg19 STAD TCGA-CD-5800 2 In-Frame Inter-chr q23.3 p21.31 13445 ChimerSeq FusionScan TCGA_RNA-Seq TYK2-KEAP1 TYK2 chr19 10490290 - KEAP1 chr19 10610756 - Exonic hg19 STAD TCGA-CD-5800 2 5'UTR-5'UTR Intra-chr p13.2 TK:JakA p13.2 Oncogene Seq+ 13446 ChimerSeq FusionScan TCGA_RNA-Seq LSG1-CCZ1 LSG1 chr3 194386285 - CCZ1 chr7 5958497 + Exonic hg19 STAD TCGA-CD-5800 2 Out-of-Frame Inter-chr q29 p22.1 13447 ChimerSeq FusionScan TCGA_RNA-Seq FLJ31306-TJP3 FLJ31306 chr14 58764672 - TJP3 chr19 3743936 + Exonic hg19 STAD TCGA-CD-5800 2 3'UTR-CDS Inter-chr p13.3 13448 ChimerSeq FusionScan TCGA_RNA-Seq EEF1D-NAPA EEF1D chr8 144679517 - NAPA chr19 48004006 - Exonic hg19 STAD TCGA-CD-5800 2 5'UTR-CDS Inter-chr q13.33 13449 ChimerSeq FusionScan TCGA_RNA-Seq PUS7-FGFR1OP PUS7 chr7 105162498 - FGFR1OP chr6 167435896 + Exonic hg19 STAD TCGA-CD-5800 2 5'UTR-CDS Inter-chr q22.3 q27 13450 ChimerSeq FusionScan TCGA_RNA-Seq ERCC1-ANKIB1 ERCC1 chr19 45916934 - ANKIB1 chr7 91991498 + Exonic hg19 STAD TCGA-R5-A7ZF 2 Out-of-Frame Inter-chr q13.32 Oncogene q21.2 13451 ChimerSeq FusionScan TCGA_RNA-Seq FANCA-CYP20A1 FANCA chr16 89880927 - CYP20A1 chr2 204143295 + Exonic hg19 STAD TCGA-R5-A7ZF 2 In-Frame Inter-chr q24.3 Oncogene q33.2 13452 ChimerSeq FusionScan TCGA_RNA-Seq YWHAG-C7orf42 YWHAG chr7 75988038 - C7orf42 chr7 66406834 + Exonic hg19 STAD TCGA-R5-A7ZF 2 CDS-5'UTR Intra-chr q11.23 13453 ChimerSeq FusionScan TCGA_RNA-Seq ZNF670-AHCTF1 ZNF670 chr1 247241895 - AHCTF1 chr1 247004300 - Exonic hg19 STAD TCGA-R5-A7ZF 2 Out-of-Frame Intra-chr q44 Transcription factor q44 Transcription factor 13454 ChimerSeq FusionScan TCGA_RNA-Seq SNRNP200-SDCCAG8 SNRNP200 chr2 96950917 - SDCCAG8 chr1 243493841 + Exonic hg19 STAD TCGA-R5-A7ZF 2 In-Frame Inter-chr q11.2 13455 ChimerSeq FusionScan TCGA_RNA-Seq SPATA6-NRD1 SPATA6 chr1 48878781 - NRD1 chr1 52287227 - Exonic hg19 STAD TCGA-R5-A7ZF 2 In-Frame Intra-chr p33 13456 ChimerSeq FusionScan TCGA_RNA-Seq ROR1-ITGB3BP ROR1 chr1 64516388 + ITGB3BP chr1 63974241 - Exonic hg19 STAD TCGA-R5-A7ZF 2 In-Frame Intra-chr p31.3 TK:Ror p31.3 13457 ChimerSeq FusionScan TCGA_RNA-Seq IGFBP3-ZNF277 IGFBP3 chr7 45956146 - ZNF277 chr7 111979897 + Exonic hg19 STAD TCGA-R5-A7ZF 2 In-Frame Intra-chr p12.3 Tumor suppressor gene q31.1 Transcription factor 13458 ChimerSeq FusionScan TCGA_RNA-Seq KDM5A-NINJ2 KDM5A chr12 404738 - NINJ2 chr12 675344 - Exonic hg19 STAD TCGA-BR-8295 10 In-Frame Intra-chr p13.33 Tumor suppressor gene p13.33 Seq+ 13459 ChimerSeq FusionScan TCGA_RNA-Seq PACSIN2-LGALS1 PACSIN2 chr22 43272142 - LGALS1 chr22 38072992 + Exonic hg19 STAD TCGA-BR-8295 3 Out-of-Frame Intra-chr q13.2 q13.1 Seq+ 13460 ChimerSeq FusionScan TCGA_RNA-Seq SLC30A7-CDC14A SLC30A7 chr1 101362227 + CDC14A chr1 100905487 + Exonic hg19 STAD TCGA-BR-8295 2 In-Frame Intra-chr p21.2 p21.2 13461 ChimerSeq FusionScan TCGA_RNA-Seq CTNNA1-SCUBE1 CTNNA1 chr5 138089199 + SCUBE1 chr22 43617295 - Exonic hg19 STAD TCGA-BR-8295 2 5'UTR-CDS Inter-chr q31.2 Oncogene q13.2 Seq+ 13462 ChimerSeq FusionScan TCGA_RNA-Seq SNHG4-SVIP SNHG4 chr5 138614097 + SVIP chr11 22849420 - Exonic hg19 STAD TCGA-BR-8295 2 5'UTR-CDS Inter-chr q31.2 p14.3 13463 ChimerSeq FusionScan TCGA_RNA-Seq WEE1-HDLBP WEE1 chr11 9598810 + HDLBP chr2 242186557 - Exonic hg19 STAD TCGA-BR-8295 2 Out-of-Frame Inter-chr p15.4 q37.3 13464 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPA2B1-OAZ1 HNRNPA2B1 chr7 26240191 - OAZ1 chr19 2271383 + Exonic hg19 STAD TCGA-BR-8295 2 Out-of-Frame Inter-chr p15.2 p13.3 13465 ChimerSeq FusionScan TCGA_RNA-Seq CASZ1-MTOR CASZ1 chr1 10765548 - MTOR chr1 11288975 - Exonic hg19 STAD TCGA-BR-8590 6 5'UTR-CDS Intra-chr p36.22 Transcription factor p36.22 Oncogene Seq+ 13466 ChimerSeq FusionScan TCGA_RNA-Seq SLC12A2-MEGF10 SLC12A2 chr5 127487088 + MEGF10 chr5 126790257 + Exonic hg19 STAD TCGA-BR-8590 4 In-Frame Intra-chr q23.3 q23.2 Seq+ 13467 ChimerSeq FusionScan TCGA_RNA-Seq EFEMP2-C6orf132 EFEMP2 chr11 65637327 - C6orf132 chr6 42096516 - Exonic hg19 STAD TCGA-BR-8590 4 In-Frame Inter-chr q13.1 p21.1 Seq+ 13468 ChimerSeq FusionScan TCGA_RNA-Seq TACC2-PPAPDC1A TACC2 chr10 123903221 + PPAPDC1A chr10 122263329 + Exonic hg19 STAD TCGA-BR-8590 3 In-Frame Intra-chr q26.13 Seq+ 13469 ChimerSeq FusionScan TCGA_RNA-Seq PCBP2-STAT3 PCBP2 chr12 53849785 + STAT3 chr17 40483549 - Exonic hg19 STAD TCGA-BR-8590 3 Out-of-Frame Inter-chr q13.13 q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 13470 ChimerSeq FusionScan TCGA_RNA-Seq MAP4-SHISA5 MAP4 chr3 47898920 - SHISA5 chr3 48538726 - Exonic hg19 STAD TCGA-BR-8590 3 In-Frame Intra-chr p21.31 p21.31 Seq+ 13471 ChimerSeq FusionScan TCGA_RNA-Seq BMPR2-SPATS2L BMPR2 chr2 203332412 + SPATS2L chr2 201277033 + Exonic hg19 STAD TCGA-BR-8590 2 3'UTR-CDS Intra-chr q33.1 TKL:STKR Tumor suppressor gene q33.1 Seq+ 13472 ChimerSeq FusionScan TCGA_RNA-Seq PACS1-FAM32A PACS1 chr11 65838313 + FAM32A chr19 16301330 + Exonic hg19 STAD TCGA-BR-8590 2 Out-of-Frame Inter-chr q13.1 p13.11 Seq+ 13473 ChimerSeq FusionScan TCGA_RNA-Seq AKAP13-MUSK AKAP13 chr15 86228104 + MUSK chr9 113509920 + Exonic hg19 STAD TCGA-R5-A805 4 In-Frame Inter-chr q25.3 q31.3 TK:Musk Seq+ 13474 ChimerSeq FusionScan TCGA_RNA-Seq CMTM4-TRIM40 CMTM4 chr16 66730242 - TRIM40 chr6 30113770 + Exonic hg19 STAD TCGA-R5-A805 3 In-Frame Inter-chr q22.1 Seq+ 13475 ChimerSeq FusionScan TCGA_RNA-Seq PRR14L-YWHAH PRR14L chr22 32100640 - YWHAH chr22 32352125 + Exonic hg19 STAD TCGA-R5-A805 2 Out-of-Frame Intra-chr q12.2 q12.3 13476 ChimerSeq FusionScan TCGA_RNA-Seq AXIN1-LUC7L AXIN1 chr16 354303 - LUC7L chr16 243014 - Exonic hg19 STAD TCGA-R5-A805 2 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 13477 ChimerSeq FusionScan TCGA_RNA-Seq SNRNP200-MLF2 SNRNP200 chr2 96950917 - MLF2 chr12 6858148 - Exonic hg19 STAD TCGA-R5-A805 2 Out-of-Frame Inter-chr q11.2 p13.31 13478 ChimerSeq FusionScan TCGA_RNA-Seq TAF9-OCLN TAF9 chr5 68651475 - OCLN chr5 68800003 + Exonic hg19 STAD TCGA-R5-A805 2 CDS-5'UTR Intra-chr q13.2 13479 ChimerSeq FusionScan TCGA_RNA-Seq TIAL1-AATF TIAL1 chr10 121336591 - AATF chr17 35376303 + Exonic hg19 STAD TCGA-R5-A805 2 In-Frame Inter-chr q26.11 13480 ChimerSeq FusionScan TCGA_RNA-Seq ULK1-SFSWAP ULK1 chr12 132380369 + SFSWAP chr12 132281722 + Exonic hg19 STAD TCGA-BR-7704 4 Out-of-Frame Intra-chr q24.33 Other:ULK q24.33 Seq+ 13481 ChimerSeq FusionScan TCGA_RNA-Seq MFSD8-HIPK2 MFSD8 chr4 128870958 - HIPK2 chr7 139305309 - Exonic hg19 STAD TCGA-BR-7704 3 Out-of-Frame Inter-chr q28.2 q34 CMGC:DYRK Tumor suppressor gene Seq+ 13482 ChimerSeq FusionScan TCGA_RNA-Seq AP4B1-NRD1 AP4B1 chr1 114443857 - NRD1 chr1 52280485 - Exonic hg19 STAD TCGA-BR-8592 2 In-Frame Intra-chr p13.2 13483 ChimerSeq FusionScan TCGA_RNA-Seq SIPA1L3-EIF3B SIPA1L3 chr19 38519796 + EIF3B chr7 2411411 + Exonic hg19 STAD TCGA-CD-A4MH 11 5'UTR-CDS Inter-chr q13.13 p22.3 Seq+ 13484 ChimerSeq FusionScan TCGA_RNA-Seq LUZP1-CLPB LUZP1 chr1 23495258 - CLPB chr11 72028264 - Exonic hg19 STAD TCGA-CD-A4MH 9 5'UTR-CDS Inter-chr p36.12 q13.4 Seq+ 13485 ChimerSeq FusionScan TCGA_RNA-Seq GRK6-DBN1 GRK6 chr5 176862122 + DBN1 chr5 176886269 - Exonic hg19 STAD TCGA-CD-A4MH 9 In-Frame Intra-chr q35.3 q35.3 Seq+ 13486 ChimerSeq FusionScan TCGA_RNA-Seq SIPA1L3-EIF3B SIPA1L3 chr19 38519796 + EIF3B chr7 2412307 + Exonic hg19 STAD TCGA-CD-A4MH 7 5'UTR-CDS Inter-chr q13.13 p22.3 Seq+ 13487 ChimerSeq FusionScan TCGA_RNA-Seq RHPN2-PEPD RHPN2 chr19 33481419 - PEPD chr19 33984243 - Exonic hg19 STAD TCGA-CD-A4MH 4 In-Frame Intra-chr q13.11 q13.11 Seq+ 13488 ChimerSeq FusionScan TCGA_RNA-Seq UQCC-ERGIC3 UQCC chr20 33981894 - ERGIC3 chr20 34130071 + Exonic hg19 STAD TCGA-CD-A4MH 2 Out-of-Frame Intra-chr q11.22 13489 ChimerSeq FusionScan TCGA_RNA-Seq NPLOC4-DNAH17 NPLOC4 chr17 79580343 - DNAH17 chr17 76528818 - Exonic hg19 STAD TCGA-CD-A4MH 2 Out-of-Frame Intra-chr q25.3 q25.3 Seq+ 13490 ChimerSeq FusionScan TCGA_RNA-Seq UBE2V1-WFDC2 UBE2V1 chr20 48729643 - WFDC2 chr20 44108581 + Exonic hg19 STAD TCGA-CD-A4MH 2 In-Frame Intra-chr q13.13 q13.12 13491 ChimerSeq FusionScan TCGA_RNA-Seq SIPA1L3-GYG2 SIPA1L3 chr19 38397998 + GYG2 chrX 2793850 + Exonic hg19 STAD TCGA-CD-A4MH 2 5'UTR-CDS Inter-chr q13.13 p22.33 Seq+ 13492 ChimerSeq FusionScan TCGA_RNA-Seq CNOT10-CACNA2D4 CNOT10 chr3 32778982 + CACNA2D4 chr12 1955855 - Exonic hg19 STAD TCGA-CD-A4MH 2 In-Frame Inter-chr p22.3 p13.33 Seq+ 13493 ChimerSeq FusionScan TCGA_RNA-Seq GDI1-NDUFS2 GDI1 chrX 153669542 + NDUFS2 chr1 161183945 + Exonic hg19 STAD TCGA-CD-A4MH 2 Out-of-Frame Inter-chr q28 q23.3 Seq+ 13494 ChimerSeq FusionScan TCGA_RNA-Seq COL28A1-ZCCHC2 COL28A1 chr7 7491949 - ZCCHC2 chr18 60206913 + Exonic hg19 STAD TCGA-CD-A4MH 2 In-Frame Inter-chr p21.3 q21.33 Seq+ 13495 ChimerSeq FusionScan TCGA_RNA-Seq MPRIP-UNC50 MPRIP chr17 16946285 + UNC50 chr2 99226218 + Exonic hg19 STAD TCGA-CD-A4MH 2 CDS-5'UTR Inter-chr p11.2 q11.2 13496 ChimerSeq FusionScan TCGA_RNA-Seq SEMA4B-CIB2 SEMA4B chr15 90728313 + CIB2 chr15 78403618 - Exonic hg19 STAD TCGA-VQ-AA6D 18 5'UTR-CDS Intra-chr q26.1 q25.1 Seq+ 13497 ChimerSeq FusionScan TCGA_RNA-Seq RAD21-EIF3H RAD21 chr8 117868404 - EIF3H chr8 117671219 - Exonic hg19 STAD TCGA-VQ-AA6D 18 In-Frame Intra-chr q24.11 q24.11 Seq+ 13498 ChimerSeq FusionScan TCGA_RNA-Seq EPHA2-FBXO42 EPHA2 chr1 16474872 - FBXO42 chr1 16583254 - Exonic hg19 STAD TCGA-VQ-AA6D 15 In-Frame Intra-chr p36.13 Tumor suppressor gene p36.13 Seq+ 13499 ChimerSeq FusionScan TCGA_RNA-Seq ARF1-GUK1 ARF1 chr1 228270466 + GUK1 chr1 228333211 + Exonic hg19 STAD TCGA-VQ-AA6D 11 5'UTR-5'UTR Intra-chr q42.13 Tumor suppressor gene q42.13 13500 ChimerSeq FusionScan TCGA_RNA-Seq NCOA6-GGT7 NCOA6 chr20 33413274 - GGT7 chr20 33440341 - Exonic hg19 STAD TCGA-VQ-AA6D 8 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 13501 ChimerSeq FusionScan TCGA_RNA-Seq GPR56-BCAR4 GPR56 chr16 57654048 + BCAR4 chr16 11914154 - Exonic hg19 STAD TCGA-VQ-AA6D 8 5'UTR-3'UTR Intra-chr q21 p13.13 Seq+ 13502 ChimerSeq FusionScan TCGA_RNA-Seq ATR-R3HDM2 ATR chr3 142284962 - R3HDM2 chr12 57650294 - Exonic hg19 STAD TCGA-VQ-AA6D 6 3'UTR-CDS Inter-chr q23 Atypical:PIKK Oncogene Tumor suppressor gene q13.3 Seq+ 13503 ChimerSeq FusionScan TCGA_RNA-Seq GPR56-BCAR4 GPR56 chr16 57654048 + BCAR4 chr16 11922248 - Exonic hg19 STAD TCGA-VQ-AA6D 5 5'UTR-3'UTR Intra-chr q21 p13.13 Seq+ 13504 ChimerSeq FusionScan TCGA_RNA-Seq USP48-WNT4 USP48 chr1 22041881 - WNT4 chr1 22456344 - Exonic hg19 STAD TCGA-VQ-AA6D 5 Out-of-Frame Intra-chr p36.12 p36.12 Seq+ 13505 ChimerSeq FusionScan TCGA_RNA-Seq STK24-DOCK9 STK24 chr13 99171496 - DOCK9 chr13 99532926 - Exonic hg19 STAD TCGA-VQ-AA6D 4 In-Frame Intra-chr q32.2 q32.3 Seq+ 13506 ChimerSeq FusionScan TCGA_RNA-Seq GPR56-BCAR4 GPR56 chr16 57654048 + BCAR4 chr16 11915612 - Exonic hg19 STAD TCGA-VQ-AA6D 4 5'UTR-3'UTR Intra-chr q21 p13.13 Seq+ 13507 ChimerSeq FusionScan TCGA_RNA-Seq BAD-TRMT112 BAD chr11 64051653 - TRMT112 chr11 64084837 - Exonic hg19 STAD TCGA-VQ-AA6D 4 Out-of-Frame Intra-chr q13.1 q13.1 Seq+ 13508 ChimerSeq FusionScan TCGA_RNA-Seq LINC00467-TRAF5 LINC00467 chr1 211556267 + TRAF5 chr1 211542793 + Exonic hg19 STAD TCGA-VQ-AA6D 4 5'UTR-CDS Intra-chr q32.3 q32.3 13509 ChimerSeq FusionScan TCGA_RNA-Seq PTGES2-CIZ1 PTGES2 chr9 130890526 - CIZ1 chr9 130940042 - Exonic hg19 STAD TCGA-VQ-AA6D 4 5'UTR-CDS Intra-chr q34.11 q34.11 Tumor suppressor gene Seq+ 13510 ChimerSeq FusionScan TCGA_RNA-Seq ECT2-SPATA16 ECT2 chr3 172520770 + SPATA16 chr3 172766884 - Exonic hg19 STAD TCGA-VQ-AA6D 3 In-Frame Intra-chr q26.31 Tumor suppressor gene q26.31 Seq+ 13511 ChimerSeq FusionScan TCGA_RNA-Seq NFE2L1-CDK5RAP3 NFE2L1 chr17 46125824 + CDK5RAP3 chr17 46050884 + Exonic hg19 STAD TCGA-VQ-AA6D 3 5'UTR-CDS Intra-chr q21.32 Transcription factor q21.32 Seq+ 13512 ChimerSeq FusionScan TCGA_RNA-Seq GIGYF2-COG4 GIGYF2 chr2 233671367 + COG4 chr16 70551643 - Exonic hg19 STAD TCGA-VQ-AA6D 3 Out-of-Frame Inter-chr q37.1 q22.1 Seq+ 13513 ChimerSeq FusionScan TCGA_RNA-Seq TIMP2-RBFOX3 TIMP2 chr17 76921040 - RBFOX3 chr17 77093827 - Exonic hg19 STAD TCGA-VQ-AA6D 3 In-Frame Intra-chr q25.3 q25.3 Seq+ 13514 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD11-TMEM123 ANKRD11 chr16 89484691 - TMEM123 chr11 102272937 - Exonic hg19 STAD TCGA-VQ-AA6D 2 5'UTR-CDS Inter-chr q24.3 q22.2 13515 ChimerSeq FusionScan TCGA_RNA-Seq UBXN2A-PTPRK UBXN2A chr2 24194284 + PTPRK chr6 128505870 - Exonic hg19 STAD TCGA-VQ-AA6D 2 Out-of-Frame Inter-chr p23.3 Tumor suppressor gene 13516 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPF-MGMT HNRNPF chr10 43904578 - MGMT chr10 131334504 + Exonic hg19 STAD TCGA-D7-A4YX 3 5'UTR-CDS Intra-chr q11.21 q26.3 13517 ChimerSeq FusionScan TCGA_RNA-Seq SERINC2-WSB1 SERINC2 chr1 31902385 + WSB1 chr17 25639235 + Exonic hg19 STAD TCGA-D7-A4YX 2 In-Frame Inter-chr p35.2 q11.1 13518 ChimerSeq FusionScan TCGA_RNA-Seq PI4KA-MED15 PI4KA chr22 21212857 - MED15 chr22 20891403 + Exonic hg19 STAD TCGA-D7-A4YX 2 Out-of-Frame Intra-chr q11.21 q11.21 13519 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-SH3YL1 RCC1 chr1 28834672 + SH3YL1 chr2 230044 - Exonic hg19 STAD TCGA-D7-A4YX 2 5'UTR-CDS Inter-chr p35.3 p25.3 13520 ChimerSeq FusionScan TCGA_RNA-Seq IDO1-TAX1BP1 IDO1 chr8 39771528 + TAX1BP1 chr7 27855967 + Exonic hg19 STAD TCGA-D7-A4YX 2 In-Frame Inter-chr p11.21 p15.2 13521 ChimerSeq FusionScan TCGA_RNA-Seq SIK1-DDX39B SIK1 chr21 44845286 - DDX39B chr6 31500688 - Exonic hg19 STAD TCGA-D7-A4YX 2 CDS-5'UTR Inter-chr q22.3 Tumor suppressor gene 13522 ChimerSeq FusionScan TCGA_RNA-Seq PIEZO1-UBB PIEZO1 chr16 88851308 - UBB chr17 16285215 + Exonic hg19 STAD TCGA-D7-A4YX 2 CDS-5'UTR Inter-chr q24.3 p11.2 13523 ChimerSeq FusionScan TCGA_RNA-Seq KIDINS220-KDM4C KIDINS220 chr2 8918768 - KDM4C chr9 7046861 + Exonic hg19 STAD TCGA-D7-A4YX 2 In-Frame Inter-chr p25.1 p24.1 13524 ChimerSeq FusionScan TCGA_RNA-Seq NOL10-LAP3 NOL10 chr2 10784445 - LAP3 chr4 17583910 + Exonic hg19 STAD TCGA-D7-A4YX 2 In-Frame Inter-chr p25.1 p15.32 13525 ChimerSeq FusionScan TCGA_RNA-Seq PPIB-RASA1 PPIB chr15 64454239 - RASA1 chr5 86667934 + Exonic hg19 STAD TCGA-D7-A4YX 2 In-Frame Inter-chr q22.31 q14.3 13526 ChimerSeq FusionScan TCGA_RNA-Seq LRP5-CHKA LRP5 chr11 68080273 + CHKA chr11 67842297 - Exonic hg19 STAD TCGA-VQ-A94T 3 Out-of-Frame Intra-chr q13.2 q13.2 Seq+ 13527 ChimerSeq FusionScan TCGA_RNA-Seq NDUFS8-UNC93B1 NDUFS8 chr11 67798200 + UNC93B1 chr11 67759328 - Exonic hg19 STAD TCGA-VQ-A94T 2 5'UTR-CDS Intra-chr q13.2 q13.2 13528 ChimerSeq FusionScan TCGA_RNA-Seq C5orf45-ZFP62 C5orf45 chr5 179280377 - ZFP62 chr5 180278493 - Exonic hg19 STAD TCGA-CG-4474 2 Out-of-Frame Intra-chr q35.3 Transcription factor 13529 ChimerSeq FusionScan TCGA_RNA-Seq JMJD1C-FAM53B JMJD1C chr10 65024410 - FAM53B chr10 126395456 - Exonic hg19 STAD TCGA-FP-7916 2 CDS-5'UTR Intra-chr q21.3 q26.13 13530 ChimerSeq FusionScan TCGA_RNA-Seq CARKD-BCOR CARKD chr13 111267994 + BCOR chrX 39937222 - Exonic hg19 STAD TCGA-FP-7916 2 5'UTR-5'UTR Inter-chr p11.4 Oncogene 13531 ChimerSeq FusionScan TCGA_RNA-Seq TNRC18-MYL4 TNRC18 chr7 5391449 - MYL4 chr17 45291164 + Exonic hg19 STAD TCGA-FP-7916 2 Out-of-Frame Inter-chr p22.1 q21.32 Seq+ 13532 ChimerSeq FusionScan TCGA_RNA-Seq MICALL2-CERS2 MICALL2 chr7 1498819 - CERS2 chr1 150941567 - Exonic hg19 STAD TCGA-FP-7916 2 CDS-5'UTR Inter-chr p22.3 q21.3 13533 ChimerSeq FusionScan TCGA_RNA-Seq DNAL1-KPNA1 DNAL1 chr14 74111745 + KPNA1 chr3 122152635 - Exonic hg19 STAD TCGA-FP-7916 2 In-Frame Inter-chr q24.3 q21.1 13534 ChimerSeq FusionScan TCGA_RNA-Seq RET-FGFR3 RET chr10 43612179 + FGFR3 chr4 1807285 + Exonic hg19 STAD TCGA-FP-7916 2 In-Frame Inter-chr q11.21 TK:Ret Oncogene p16.3 TK:FGFR Oncogene 13535 ChimerSeq FusionScan TCGA_RNA-Seq DYNC1H1-TBC1D20 DYNC1H1 chr14 102496049 + TBC1D20 chr20 425774 - Exonic hg19 STAD TCGA-FP-7916 2 Out-of-Frame Inter-chr q32.31 p13 13536 ChimerSeq FusionScan TCGA_RNA-Seq TMEM126B-SKI TMEM126B chr11 85346822 + SKI chr1 2234416 + Exonic hg19 STAD TCGA-FP-7916 2 Out-of-Frame Inter-chr q14.1 p36.33 Transcription factor 13537 ChimerSeq FusionScan TCGA_RNA-Seq SCN3A-EPB41L5 SCN3A chr2 166043060 - EPB41L5 chr2 120849130 + Exonic hg19 STAD TCGA-FP-7916 2 5'UTR-CDS Intra-chr q24.3 q14.2 13538 ChimerSeq FusionScan TCGA_RNA-Seq MRE11A-C11orf74 MRE11A chr11 94178975 - C11orf74 chr11 36631630 + Exonic hg19 STAD TCGA-HU-A4GJ 2 CDS-5'UTR Intra-chr Oncogene p12 Seq+ 13539 ChimerSeq FusionScan TCGA_RNA-Seq EZR-NMT1 EZR chr6 159190357 - NMT1 chr17 43180318 + Exonic hg19 STAD TCGA-HU-A4GJ 2 In-Frame Inter-chr q25.3 q21.31 13540 ChimerSeq FusionScan TCGA_RNA-Seq RALA-CDK13 RALA chr7 39663424 + CDK13 chr7 40027197 + Exonic hg19 STAD TCGA-HU-A4GJ 2 5'UTR-CDS Intra-chr p14.1 p14.1 13541 ChimerSeq FusionScan TCGA_RNA-Seq SH2D3A-VAV1 SH2D3A chr19 6759604 - VAV1 chr19 6836442 + Exonic hg19 STAD TCGA-HU-A4GJ 2 In-Frame Intra-chr p13.3 p13.3 Seq+ 13542 ChimerSeq FusionScan TCGA_RNA-Seq YWHAE-NOC4L YWHAE chr17 1303340 - NOC4L chr12 132635525 + Exonic hg19 STAD TCGA-HU-A4GJ 2 In-Frame Inter-chr p13.3 q24.33 13543 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2IP-NR3C1 ERBB2IP chr5 65222634 + NR3C1 chr5 142693733 - Exonic hg19 STAD TCGA-HU-A4GJ 2 5'UTR-CDS Intra-chr q31.3 Transcription factor Seq+ 13544 ChimerSeq FusionScan TCGA_RNA-Seq VWF-C9orf3 VWF chr12 6204625 - C9orf3 chr9 97848963 + Exonic hg19 STAD TCGA-HU-A4GJ 2 CDS-3'UTR Inter-chr p13.31 q22.32 Seq+ 13545 ChimerSeq FusionScan TCGA_RNA-Seq TSPAN5-SMARCAD1 TSPAN5 chr4 99428828 - SMARCAD1 chr4 95185857 + Exonic hg19 STAD TCGA-HU-A4GJ 2 In-Frame Intra-chr q23 q22.3 Seq+ 13546 ChimerSeq FusionScan TCGA_RNA-Seq XPO7-RAN XPO7 chr8 21856816 + RAN chr12 131357380 + Exonic hg19 STAD TCGA-HU-A4GJ 2 In-Frame Inter-chr p21.3 q24.33 13547 ChimerSeq FusionScan TCGA_RNA-Seq FOXJ3-EIF4G3 FOXJ3 chr1 42801296 - EIF4G3 chr1 21268823 - Exonic hg19 STAD TCGA-BR-8058 5 5'UTR-CDS Intra-chr p34.2 Transcription factor p36.12 Seq+ 13548 ChimerSeq FusionScan TCGA_RNA-Seq GRB10-PSMB1 GRB10 chr7 50860920 - PSMB1 chr6 170858201 - Exonic hg19 STAD TCGA-BR-8058 2 5'UTR-CDS Inter-chr p12.1 13549 ChimerSeq FusionScan TCGA_RNA-Seq ARID1B-WTAP ARID1B chr6 157100605 + WTAP chr6 160157289 + Exonic hg19 STAD TCGA-BR-8058 2 CDS-5'UTR Intra-chr q25.3 Oncogene q25.3 Seq+ 13550 ChimerSeq FusionScan TCGA_RNA-Seq ZMYM1-S100PBP ZMYM1 chr1 35545043 + S100PBP chr1 33318679 + Exonic hg19 STAD TCGA-BR-8058 2 5'UTR-CDS Intra-chr p34.3 p35.1 13551 ChimerSeq FusionScan TCGA_RNA-Seq ZNF638-ELMO1 ZNF638 chr2 71559005 + ELMO1 chr7 37172839 - Exonic hg19 STAD TCGA-BR-8058 2 5'UTR-CDS Inter-chr p13.3 p14.1 13552 ChimerSeq FusionScan TCGA_RNA-Seq SMARCA4-ADRM1 SMARCA4 chr19 11144876 + ADRM1 chr20 60883076 + Exonic hg19 STAD TCGA-FP-A4BE 3 Out-of-Frame Inter-chr p13.2 Oncogene Tumor suppressor gene q13.33 13553 ChimerSeq FusionScan TCGA_RNA-Seq NCOR1-TTC19 NCOR1 chr17 15960827 - TTC19 chr17 15928330 + Exonic hg19 STAD TCGA-FP-A4BE 2 Out-of-Frame Intra-chr p11.2 Oncogene p12 13554 ChimerSeq FusionScan TCGA_RNA-Seq C20orf7-WHSC1L1 C20orf7 chr20 13769298 + WHSC1L1 chr8 38205733 - Exonic hg19 STAD TCGA-FP-A4BE 2 5'UTR-5'UTR Inter-chr p11.23 Tumor suppressor gene 13555 ChimerSeq FusionScan TCGA_RNA-Seq ARID5B-NRBF2 ARID5B chr10 63810759 + NRBF2 chr10 64905968 + Exonic hg19 STAD TCGA-FP-A4BE 2 In-Frame Intra-chr q21.2 Transcription factor q21.3 13556 ChimerSeq FusionScan TCGA_RNA-Seq BPTF-LRRC37A BPTF chr17 65822453 + LRRC37A chr17 44407815 + Exonic hg19 STAD TCGA-FP-A4BE 2 CDS-5'UTR Intra-chr q24.2 Transcription factor 13557 ChimerSeq FusionScan TCGA_RNA-Seq ATXN7-ZNF385D ATXN7 chr3 63965843 + ZNF385D chr3 21478695 - Exonic hg19 STAD TCGA-R5-A7O7 8 Out-of-Frame Intra-chr p14.1 p24.3 Transcription factor Seq+ 13558 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP21-MSRB2 ARHGAP21 chr10 25010765 - MSRB2 chr10 23399170 + Exonic hg19 STAD TCGA-R5-A7O7 7 In-Frame Intra-chr p12.1 p12.2 Seq+ 13559 ChimerSeq FusionScan TCGA_RNA-Seq ACBD6-RFWD2 ACBD6 chr1 180382500 - RFWD2 chr1 176118210 - Exonic hg19 STAD TCGA-R5-A7O7 3 In-Frame Intra-chr q25.3 q25.2 Tumor suppressor gene 13560 ChimerSeq FusionScan TCGA_RNA-Seq TTLL4-CXCR2 TTLL4 chr2 219575760 + CXCR2 chr2 218999499 + Exonic hg19 STAD TCGA-R5-A7O7 3 5'UTR-5'UTR Intra-chr q35 q35 Tumor suppressor gene Seq+ 13561 ChimerSeq FusionScan TCGA_RNA-Seq ENC1-HSF2BP ENC1 chr5 73936131 - HSF2BP chr21 44949842 - Exonic hg19 STAD TCGA-R5-A7O7 3 5'UTR-CDS Inter-chr q13.3 q22.3 13562 ChimerSeq FusionScan TCGA_RNA-Seq UGT1A6-NDUFA10 UGT1A6 chr2 234602511 + NDUFA10 chr2 240946787 - Exonic hg19 STAD TCGA-R5-A7O7 3 Out-of-Frame Intra-chr q37.1 13563 ChimerSeq FusionScan TCGA_RNA-Seq USP15-SPOPL USP15 chr12 62654284 + SPOPL chr2 139326505 + Exonic hg19 STAD TCGA-R5-A7O7 2 In-Frame Inter-chr q14.1 q22.1 13564 ChimerSeq FusionScan TCGA_RNA-Seq SPATS2L-PLCL1 SPATS2L chr2 201171645 + PLCL1 chr2 198948481 + Exonic hg19 STAD TCGA-R5-A7O7 2 5'UTR-CDS Intra-chr q33.1 q33.1 13565 ChimerSeq FusionScan TCGA_RNA-Seq RPS25-PGP RPS25 chr11 118888991 - PGP chr16 2264054 - Exonic hg19 STAD TCGA-R5-A7O7 2 Out-of-Frame Inter-chr p13.3 13566 ChimerSeq FusionScan TCGA_RNA-Seq PCMTD1-KIAA0146 PCMTD1 chr8 52811489 - KIAA0146 chr8 48508372 + Exonic hg19 STAD TCGA-R5-A7O7 2 5'UTR-CDS Intra-chr q11.23 13567 ChimerSeq FusionScan TCGA_RNA-Seq UBE2R2-PRDM2 UBE2R2 chr9 33817932 + PRDM2 chr1 14142921 + Exonic hg19 STAD TCGA-R5-A7O7 2 Out-of-Frame Inter-chr p13.3 p36.21 Tumor suppressor gene Transcription factor 13568 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF3-CTNND2 ARHGEF3 chr3 57069115 - CTNND2 chr5 11732384 - Exonic hg19 STAD TCGA-R5-A7O7 2 Out-of-Frame Inter-chr p14.3 p15.2 Seq+ 13569 ChimerSeq FusionScan TCGA_RNA-Seq STAG3L1-AIMP2 STAG3L1 chr7 74988678 + AIMP2 chr7 6054776 + Exonic hg19 STAD TCGA-R5-A7O7 2 5'UTR-CDS Intra-chr q11.23 p22.1 Tumor suppressor gene 13570 ChimerSeq FusionScan TCGA_RNA-Seq IL8-TBCA IL8 chr4 74606439 + TBCA chr5 77004172 - Exonic hg19 STAD TCGA-R5-A7O7 2 Out-of-Frame Inter-chr q14.1 13571 ChimerSeq FusionScan TCGA_RNA-Seq NUP210-RBCK1 NUP210 chr3 13393378 - RBCK1 chr20 407956 + Exonic hg19 STAD TCGA-BR-A44T 2 In-Frame Inter-chr p25.1 p13 Transcription factor Seq+ 13572 ChimerSeq FusionScan TCGA_RNA-Seq RAB3IP-ABTB2 RAB3IP chr12 70132811 + ABTB2 chr11 34176316 - Exonic hg19 STAD TCGA-BR-A44T 2 5'UTR-CDS Inter-chr q15 p13 Seq+ 13573 ChimerSeq FusionScan TCGA_RNA-Seq LCOR-RPL30 LCOR chr10 98667504 + RPL30 chr8 99055003 - Exonic hg19 STAD TCGA-BR-A44T 2 5'UTR-CDS Inter-chr q24.1 Transcription factor q22.2 Seq+ 13574 ChimerSeq FusionScan TCGA_RNA-Seq TCF3-DNAJC11 TCF3 chr19 1619778 - DNAJC11 chr1 6714099 - Exonic hg19 STAD TCGA-BR-7197 16 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p36.31 Tumor suppressor gene Seq+ 13575 ChimerSeq FusionScan TCGA_RNA-Seq ZFAND2B-CYP27A1 ZFAND2B chr2 220071764 + CYP27A1 chr2 219674299 + Exonic hg19 STAD TCGA-BR-7197 4 Out-of-Frame Intra-chr q35 q35 Seq+ 13576 ChimerSeq FusionScan TCGA_RNA-Seq OLFM2-PSENEN OLFM2 chr19 10046979 - PSENEN chr19 36236735 + Exonic hg19 STAD TCGA-BR-7197 3 CDS-5'UTR Intra-chr p13.2 q13.12 Seq+ 13577 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D8-NPAS2 TBC1D8 chr2 101767588 - NPAS2 chr2 101521194 + Exonic hg19 STAD TCGA-BR-7197 2 CDS-5'UTR Intra-chr q11.2 q11.2 Tumor suppressor gene Transcription factor 13578 ChimerSeq FusionScan TCGA_RNA-Seq FBXL20-HMGA1 FBXL20 chr17 37499432 - HMGA1 chr6 34208513 + Exonic hg19 STAD TCGA-BR-7197 2 CDS-5'UTR Inter-chr q12 p21.31 Transcription factor 13579 ChimerSeq FusionScan TCGA_RNA-Seq GIGYF2-SH3BP4 GIGYF2 chr2 233562102 + SH3BP4 chr2 235903946 + Exonic hg19 STAD TCGA-BR-7197 2 5'UTR-5'UTR Intra-chr q37.1 q37.2 13580 ChimerSeq FusionScan TCGA_RNA-Seq FOXM1-DCP1B FOXM1 chr12 2975558 - DCP1B chr12 2062454 - Exonic hg19 STAD TCGA-BR-6709 17 In-Frame Intra-chr p13.33 Transcription factor p13.33 Seq+ 13581 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC7-MLLT3 ZCCHC7 chr9 37126939 + MLLT3 chr9 20456784 - Exonic hg19 STAD TCGA-BR-6709 10 In-Frame Intra-chr p13.2 p21.3 Seq+ 13582 ChimerSeq FusionScan TCGA_RNA-Seq PPFIBP1-CCDC91 PPFIBP1 chr12 27788048 + CCDC91 chr12 28515370 + Exonic hg19 STAD TCGA-BR-6709 6 In-Frame Intra-chr p11.23 p11.22 Seq+ 13583 ChimerSeq FusionScan TCGA_RNA-Seq SUV420H1-RTN3 SUV420H1 chr11 67953247 - RTN3 chr11 63517462 + Exonic hg19 STAD TCGA-BR-6709 4 Out-of-Frame Intra-chr q13.1 13584 ChimerSeq FusionScan TCGA_RNA-Seq TEAD4-DCAF10 TEAD4 chr12 3069206 + DCAF10 chr9 37854776 + Exonic hg19 STAD TCGA-BR-6709 3 5'UTR-CDS Inter-chr p13.33 Transcription factor p13.2 Seq+ 13585 ChimerSeq FusionScan TCGA_RNA-Seq IRF1-FOPNL IRF1 chr5 131822248 - FOPNL chr16 15973745 - Exonic hg19 STAD TCGA-BR-6709 3 In-Frame Inter-chr q31.1 Tumor suppressor gene Transcription factor p13.11 Seq+ 13586 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0430-KCNAB2 KIAA0430 chr16 15725237 - KCNAB2 chr1 6100576 + Exonic hg19 STAD TCGA-BR-6709 2 CDS-5'UTR Inter-chr p36.31 13587 ChimerSeq FusionScan TCGA_RNA-Seq SOX5-ITPR2 SOX5 chr12 24715266 - ITPR2 chr12 26943160 - Exonic hg19 STAD TCGA-BR-6709 2 5'UTR-CDS Intra-chr p12.1 Transcription factor p11.23 13588 ChimerSeq FusionScan TCGA_RNA-Seq CCAR1-SPAG5 CCAR1 chr10 70532856 + SPAG5 chr17 26906503 - Exonic hg19 STAD TCGA-BR-6709 2 In-Frame Inter-chr q21.3 Tumor suppressor gene q11.2 13589 ChimerSeq FusionScan TCGA_RNA-Seq DAG1-CORO1B DAG1 chr3 49507866 + CORO1B chr11 67210101 - Exonic hg19 STAD TCGA-BR-6709 2 5'UTR-5'UTR Inter-chr p21.31 q13.2 Seq+ 13590 ChimerSeq FusionScan TCGA_RNA-Seq VPS8-PSMD2 VPS8 chr3 184742177 + PSMD2 chr3 184019324 + Exonic hg19 STAD TCGA-BR-6709 2 In-Frame Intra-chr q27.2 q27.1 13591 ChimerSeq FusionScan TCGA_RNA-Seq SLC26A11-STXBP2 SLC26A11 chr17 78210902 + STXBP2 chr19 7712047 + Exonic hg19 STAD TCGA-BR-6709 2 In-Frame Inter-chr q25.3 p13.2 13592 ChimerSeq FusionScan TCGA_RNA-Seq CCDC91-ITPR2 CCDC91 chr12 28544344 + ITPR2 chr12 26878698 - Exonic hg19 STAD TCGA-BR-6709 2 Out-of-Frame Intra-chr p11.22 p11.23 13593 ChimerSeq FusionScan TCGA_RNA-Seq CAPRIN2-EML2 CAPRIN2 chr12 30883172 - EML2 chr19 46113046 - Exonic hg19 STAD TCGA-BR-6709 2 In-Frame Inter-chr p11.21 q13.32 13594 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP15-GTDC1 ARHGAP15 chr2 144008169 + GTDC1 chr2 144765102 - Exonic hg19 STAD TCGA-BR-6709 2 Out-of-Frame Intra-chr q22.2 q22.3 13595 ChimerSeq FusionScan TCGA_RNA-Seq APC-DTWD2 APC chr5 112164669 + DTWD2 chr5 118183913 - Exonic hg19 STAD TCGA-EQ-A4SO 4 In-Frame Intra-chr q22.2 Oncogene Tumor suppressor gene q23.1 Seq+ 13596 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-CLU RCC1 chr1 28834672 + CLU chr8 27456152 - Exonic hg19 STAD TCGA-EQ-A4SO 2 5'UTR-CDS Inter-chr p35.3 p21.1 Tumor suppressor gene 13597 ChimerSeq FusionScan TCGA_RNA-Seq ATP11A-PLXNA1 ATP11A chr13 113530255 + PLXNA1 chr3 126722172 + Exonic hg19 STAD TCGA-EQ-A4SO 2 In-Frame Inter-chr q34 q21.3 13598 ChimerSeq FusionScan TCGA_RNA-Seq ITGAV-TRAK1 ITGAV chr2 187455250 + TRAK1 chr3 42240668 + Exonic hg19 STAD TCGA-EQ-A4SO 2 Out-of-Frame Inter-chr q32.1 Tumor suppressor gene p22.1 Seq+ 13599 ChimerSeq FusionScan TCGA_RNA-Seq RNF145-FYB RNF145 chr5 158621723 - FYB chr5 39141243 - Exonic hg19 STAD TCGA-EQ-A4SO 2 In-Frame Intra-chr q33.3 p13.1 13600 ChimerSeq FusionScan TCGA_RNA-Seq CREB3L1-MGRN1 CREB3L1 chr11 46321714 + MGRN1 chr16 4727463 + Exonic hg19 STAD TCGA-EQ-A4SO 2 In-Frame Inter-chr p11.2 Tumor suppressor gene Transcription factor p13.3 Seq+ 13601 ChimerSeq FusionScan TCGA_RNA-Seq TRAPPC9-ANAPC10 TRAPPC9 chr8 141310567 - ANAPC10 chr4 145916755 - Exonic hg19 STAD TCGA-EQ-A4SO 2 Out-of-Frame Inter-chr q24.3 q31.21 13602 ChimerSeq FusionScan TCGA_RNA-Seq TMSB4Y-KAL1 TMSB4Y chrY 15816315 + KAL1 chrX 8667786 - Exonic hg19 STAD TCGA-EQ-A4SO 2 Out-of-Frame Inter-chr q11.221 13603 ChimerSeq FusionScan TCGA_RNA-Seq APP-NARG2 APP chr21 27277335 - NARG2 chr15 60728426 - Exonic hg19 STAD TCGA-EQ-A4SO 2 In-Frame Inter-chr q21.3 13604 ChimerSeq FusionScan TCGA_RNA-Seq PVRL2-RNPEP PVRL2 chr19 45377735 + RNPEP chr1 201970503 + Exonic hg19 STAD TCGA-EQ-A4SO 2 In-Frame Inter-chr q32.1 13605 ChimerSeq FusionScan TCGA_RNA-Seq YIPF1-ZCCHC2 YIPF1 chr1 54337044 - ZCCHC2 chr18 60223435 + Exonic hg19 STAD TCGA-EQ-A4SO 2 Out-of-Frame Inter-chr p32.3 q21.33 13606 ChimerSeq FusionScan TCGA_RNA-Seq BZW2-GAP43 BZW2 chr7 16685913 + GAP43 chr3 115439640 + Exonic hg19 STAD TCGA-RD-A7C1 3 5'UTR-CDS Inter-chr p21.1 q13.31 Seq+ 13607 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0528-WDR67 KIAA0528 chr12 22676359 - WDR67 chr8 124141305 + Exonic hg19 STAD TCGA-RD-A7C1 3 In-Frame Inter-chr 13608 ChimerSeq FusionScan TCGA_RNA-Seq UBE2G1-SKIL UBE2G1 chr17 4269565 - SKIL chr3 170077486 + Exonic hg19 STAD TCGA-RD-A7C1 2 CDS-5'UTR Inter-chr p13.2 q26.2 Tumor suppressor gene Transcription factor 13609 ChimerSeq FusionScan TCGA_RNA-Seq UBE2E3-TSSC1 UBE2E3 chr2 181848820 + TSSC1 chr2 3218019 - Exonic hg19 STAD TCGA-RD-A7C1 2 In-Frame Intra-chr q31.3 p25.3 13610 ChimerSeq FusionScan TCGA_RNA-Seq WARS-EPB41L4B WARS chr14 100835423 - EPB41L4B chr9 111979425 - Exonic hg19 STAD TCGA-IN-AB1X 21 Out-of-Frame Inter-chr q32.2 q31.3 Seq+ 13611 ChimerSeq FusionScan TCGA_RNA-Seq SPTLC2-DIAPH3 SPTLC2 chr14 78043109 - DIAPH3 chr13 60348957 - Exonic hg19 STAD TCGA-IN-AB1X 10 In-Frame Inter-chr q24.3 q21.2 Seq+ 13612 ChimerSeq FusionScan TCGA_RNA-Seq SMG1-MUSK SMG1 chr16 18888452 - MUSK chr9 113496530 + Exonic hg19 STAD TCGA-IN-AB1X 10 Out-of-Frame Inter-chr p12.3 Atypical:PIKK q31.3 TK:Musk 13613 ChimerSeq FusionScan TCGA_RNA-Seq WARS-EPB41L4B WARS chr14 100841619 - EPB41L4B chr9 111979425 - Exonic hg19 STAD TCGA-IN-AB1X 6 5'UTR-CDS Inter-chr q32.2 q31.3 Seq+ 13614 ChimerSeq FusionScan TCGA_RNA-Seq CSNK2A2-DOK4 CSNK2A2 chr16 58197957 - DOK4 chr16 57513600 - Exonic hg19 STAD TCGA-IN-AB1X 2 3'UTR-5'UTR Intra-chr q21 q21 13615 ChimerSeq FusionScan TCGA_RNA-Seq DOC2B-ABR DOC2B chr17 30897 - ABR chr17 1003975 - Exonic hg19 STAD TCGA-IN-AB1X 2 Out-of-Frame Intra-chr p13.3 13616 ChimerSeq FusionScan TCGA_RNA-Seq C16orf70-CRTC3 C16orf70 chr16 67166428 + CRTC3 chr15 91136867 + Exonic hg19 STAD TCGA-IN-AB1X 2 Out-of-Frame Inter-chr q22.1 q26.1 Seq+ 13617 ChimerSeq FusionScan TCGA_RNA-Seq GBP4-CELSR1 GBP4 chr1 89664477 - CELSR1 chr22 46832186 - Exonic hg19 STAD TCGA-IN-AB1X 2 Out-of-Frame Inter-chr p22.2 q13.31 13618 ChimerSeq FusionScan TCGA_RNA-Seq FRK-PPP1R36 FRK chr6 116325039 - PPP1R36 chr14 65019531 + Exonic hg19 STAD TCGA-IN-AB1X 2 Out-of-Frame Inter-chr q22.1 TK:Src Tumor suppressor gene q23.3 Seq+ 13619 ChimerSeq FusionScan TCGA_RNA-Seq PTPN3-SMG1 PTPN3 chr9 112260498 - SMG1 chr16 18903676 - Exonic hg19 STAD TCGA-IN-AB1X 2 5'UTR-CDS Inter-chr q31.3 p12.3 Atypical:PIKK 13620 ChimerSeq FusionScan TCGA_RNA-Seq HECTD1-CNOT1 HECTD1 chr14 31574588 - CNOT1 chr16 58594266 - Exonic hg19 STAD TCGA-IN-AB1X 2 Out-of-Frame Inter-chr q12 q21 Seq+ 13621 ChimerSeq FusionScan TCGA_RNA-Seq WARS-EPB41L4B WARS chr14 100835423 - EPB41L4B chr9 111976098 - Exonic hg19 STAD TCGA-IN-AB1X 2 Out-of-Frame Inter-chr q32.2 q31.3 Seq+ 13622 ChimerSeq FusionScan TCGA_RNA-Seq C16orf70-CRTC3 C16orf70 chr16 67166814 + CRTC3 chr15 91136867 + Exonic hg19 STAD TCGA-IN-AB1X 2 In-Frame Inter-chr q22.1 q26.1 Seq+ 13623 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS2-CEP89 TMPRSS2 chr21 42860320 - CEP89 chr19 33406423 - Exonic hg19 STAD TCGA-CD-5798 2 In-Frame Inter-chr q22.3 q13.11 Seq+ 13624 ChimerSeq FusionScan TCGA_RNA-Seq FBXO46-DMPK FBXO46 chr19 46234106 - DMPK chr19 46278292 - Exonic hg19 STAD TCGA-CD-5798 2 5'UTR-CDS Intra-chr q13.32 q13.32 13625 ChimerSeq FusionScan TCGA_RNA-Seq PHF1-MYL9 PHF1 chr6 33380570 + MYL9 chr20 35176434 + Exonic hg19 STAD TCGA-CD-5798 2 3'UTR-CDS Inter-chr Transcription factor q11.23 13626 ChimerSeq FusionScan TCGA_RNA-Seq IGFBP6-TMEM106C IGFBP6 chr12 53494944 + TMEM106C chr12 48360990 + Exonic hg19 STAD TCGA-CD-5798 2 Out-of-Frame Intra-chr q13.13 q13.11 13627 ChimerSeq FusionScan TCGA_RNA-Seq DDX52-SSH2 DDX52 chr17 35984389 - SSH2 chr17 28030080 - Exonic hg19 STAD TCGA-VQ-A94U 3 Out-of-Frame Intra-chr q12 q11.2 Seq+ 13628 ChimerSeq FusionScan TCGA_RNA-Seq MAN1A2-UHRF2 MAN1A2 chr1 117963271 + UHRF2 chr9 6420911 + Exonic hg19 STAD TCGA-VQ-A94U 2 In-Frame Inter-chr p12 p24.1 Tumor suppressor gene 13629 ChimerSeq FusionScan TCGA_RNA-Seq TAF11-ANKS1A TAF11 chr6 34855563 - ANKS1A chr6 35021875 + Exonic hg19 STAD TCGA-VQ-AA64 2 In-Frame Intra-chr p21.31 p21.31 13630 ChimerSeq FusionScan TCGA_RNA-Seq RASSF8-SSPN RASSF8 chr12 26208379 + SSPN chr12 26377225 + Exonic hg19 STAD TCGA-VQ-AA64 2 Out-of-Frame Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 13631 ChimerSeq FusionScan TCGA_RNA-Seq PTBP3-ODC1 PTBP3 chr9 114994378 - ODC1 chr2 10580994 - Exonic hg19 STAD TCGA-BR-8487 3 Out-of-Frame Inter-chr q32 p25.1 13632 ChimerSeq FusionScan TCGA_RNA-Seq PPIL3-WSB1 PPIL3 chr2 201750420 - WSB1 chr17 25636125 + Exonic hg19 STAD TCGA-BR-8487 2 In-Frame Inter-chr q33.1 q11.1 13633 ChimerSeq FusionScan TCGA_RNA-Seq MUC13-ZNF565 MUC13 chr3 124631957 - ZNF565 chr19 36686058 - Exonic hg19 STAD TCGA-BR-8487 2 Out-of-Frame Inter-chr q21.2 q13.12 Transcription factor 13634 ChimerSeq FusionScan TCGA_RNA-Seq MYL12A-RPL28 MYL12A chr18 3247907 + RPL28 chr19 55897717 + Exonic hg19 STAD TCGA-BR-8487 2 5'UTR-5'UTR Inter-chr p11.31 q13.42 13635 ChimerSeq FusionScan TCGA_RNA-Seq CCDC120-PSMD11 CCDC120 chrX 48916626 + PSMD11 chr17 30800818 + Exonic hg19 STAD TCGA-BR-8487 2 5'UTR-CDS Inter-chr p11.23 q11.2 13636 ChimerSeq FusionScan TCGA_RNA-Seq ADAR-ASH1L ADAR chr1 154600330 - ASH1L chr1 155429689 - Exonic hg19 STAD TCGA-VQ-A91A 2 5'UTR-CDS Intra-chr q21.3 q22 Transcription factor 13637 ChimerSeq FusionScan TCGA_RNA-Seq DENND1A-PSMB7 DENND1A chr9 126414291 - PSMB7 chr9 127146935 - Exonic hg19 STAD TCGA-IN-8462 3 Out-of-Frame Intra-chr q33.3 q33.3 Seq+ 13638 ChimerSeq FusionScan TCGA_RNA-Seq CNPY2-MRPL20 CNPY2 chr12 56708634 - MRPL20 chr1 1341266 - Exonic hg19 STAD TCGA-IN-8462 2 In-Frame Inter-chr q13.3 p36.33 13639 ChimerSeq FusionScan TCGA_RNA-Seq CCDC12-SETD2 CCDC12 chr3 47018126 - SETD2 chr3 47061330 - Exonic hg19 STAD TCGA-IN-8462 2 In-Frame Intra-chr p21.31 p21.31 Oncogene Tumor suppressor gene Seq+ 13640 ChimerSeq FusionScan TCGA_RNA-Seq DENND1A-PSMB7 DENND1A chr9 126414291 - PSMB7 chr9 127119194 - Exonic hg19 STAD TCGA-IN-8462 2 In-Frame Intra-chr q33.3 q33.3 Seq+ 13641 ChimerSeq FusionScan TCGA_RNA-Seq CMC2-FER CMC2 chr16 81040338 - FER chr5 108219096 + Exonic hg19 STAD TCGA-IN-8462 2 5'UTR-CDS Inter-chr q23.2 q21.3 TK:Fer 13642 ChimerSeq FusionScan TCGA_RNA-Seq RALGAPA1-VWA5A RALGAPA1 chr14 36231915 - VWA5A chr11 124007280 + Exonic hg19 STAD TCGA-IN-8462 2 In-Frame Inter-chr q13.2 q24.2 Tumor suppressor gene 13643 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC2-ALDH1A1 DNAJC2 chr7 102985005 - ALDH1A1 chr9 75545935 - Exonic hg19 STAD TCGA-BR-A4PE 14 Out-of-Frame Inter-chr q22.1 q21.13 Seq+ 13644 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC2-ALDH1A1 DNAJC2 chr7 102985005 - ALDH1A1 chr9 75555168 - Exonic hg19 STAD TCGA-BR-A4PE 12 Out-of-Frame Inter-chr q22.1 q21.13 Seq+ 13645 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-EIF1 ERBB2 chr17 37868701 + EIF1 chr17 39846029 + Exonic hg19 STAD TCGA-BR-A4PE 6 Out-of-Frame Intra-chr q12 Oncogene q21.2 Seq+ 13646 ChimerSeq FusionScan TCGA_RNA-Seq SRSF3-PTCHD4 SRSF3 chr6 36566760 + PTCHD4 chr6 47869671 - Exonic hg19 STAD TCGA-BR-A4PE 5 Out-of-Frame Intra-chr p21.31 p12.3 Seq+ 13647 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-EIF1 ERBB2 chr17 37868300 + EIF1 chr17 39846029 + Exonic hg19 STAD TCGA-BR-A4PE 4 In-Frame Intra-chr q12 Oncogene q21.2 Seq+ 13648 ChimerSeq FusionScan TCGA_RNA-Seq TNIK-CCDC37 TNIK chr3 170893040 - CCDC37 chr3 126126014 + Exonic hg19 STAD TCGA-BR-A4PE 3 Out-of-Frame Intra-chr q26.31 STE:STE20 Seq+ 13649 ChimerSeq FusionScan TCGA_RNA-Seq NSUN3-HGD NSUN3 chr3 93813998 + HGD chr3 120371498 - Exonic hg19 STAD TCGA-BR-A4PE 3 Out-of-Frame Intra-chr q11.2 q13.33 Seq+ 13650 ChimerSeq FusionScan TCGA_RNA-Seq MIEN1-GRB7 MIEN1 chr17 37885937 - GRB7 chr17 37898504 + Exonic hg19 STAD TCGA-BR-A4PE 3 Out-of-Frame Intra-chr q12 q12 Seq+ 13651 ChimerSeq FusionScan TCGA_RNA-Seq MXRA5-ATE1 MXRA5 chrX 3261686 - ATE1 chr10 123503373 - Exonic hg19 STAD TCGA-BR-A4PE 2 Out-of-Frame Inter-chr p22.33 q26.13 13652 ChimerSeq FusionScan TCGA_RNA-Seq SLIRP-HTATSF1 SLIRP chr14 78182222 + HTATSF1 chrX 135591249 + Exonic hg19 STAD TCGA-BR-A4PE 2 In-Frame Inter-chr q24.3 q26.3 13653 ChimerSeq FusionScan TCGA_RNA-Seq TNIK-DPPA2 TNIK chr3 170824971 - DPPA2 chr3 109019282 - Exonic hg19 STAD TCGA-BR-A4PE 2 Out-of-Frame Intra-chr q26.31 STE:STE20 q13.13 Seq+ 13654 ChimerSeq FusionScan TCGA_RNA-Seq MAN2B1-ERH MAN2B1 chr19 12772073 - ERH chr14 69861629 - Exonic hg19 STAD TCGA-BR-A4PE 2 In-Frame Inter-chr p13.13 q24.1 Seq+ 13655 ChimerSeq FusionScan TCGA_RNA-Seq CUL4A-PCID2 CUL4A chr13 113873362 + PCID2 chr13 113850534 - Exonic hg19 STAD TCGA-BR-A4PE 2 Out-of-Frame Intra-chr q34 q34 13656 ChimerSeq FusionScan TCGA_RNA-Seq MBNL1-ABCC5 MBNL1 chr3 152018156 + ABCC5 chr3 183732235 - Exonic hg19 STAD TCGA-BR-A4PE 2 CDS-5'UTR Intra-chr q25.1 q27.1 Seq+ 13657 ChimerSeq FusionScan TCGA_RNA-Seq TMEM87B-SHROOM3 TMEM87B chr2 112847295 + SHROOM3 chr4 77699961 + Exonic hg19 STAD TCGA-BR-A4PE 2 In-Frame Inter-chr q13 q21.1 13658 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-ZPBP2 ERBB2 chr17 37882106 + ZPBP2 chr17 38026946 + Exonic hg19 STAD TCGA-BR-A4PE 2 In-Frame Intra-chr q12 Oncogene q21.1 13659 ChimerSeq FusionScan TCGA_RNA-Seq SKAP1-PTEN SKAP1 chr17 46423266 - PTEN chr10 89711874 + Exonic hg19 STAD TCGA-BR-A4PE 2 Out-of-Frame Inter-chr q21.32 q23.31 Oncogene Tumor suppressor gene 13660 ChimerSeq FusionScan TCGA_RNA-Seq ITGB4-UNK ITGB4 chr17 73732775 + UNK chr17 73820342 + Exonic hg19 STAD TCGA-BR-A4PE 2 Out-of-Frame Intra-chr q25.1 q25.1 13661 ChimerSeq FusionScan TCGA_RNA-Seq DOPEY1-EFR3A DOPEY1 chr6 83851765 + EFR3A chr8 132980541 + Exonic hg19 STAD TCGA-BR-A4PE 2 In-Frame Inter-chr q14.1 q24.22 Seq+ 13662 ChimerSeq FusionScan TCGA_RNA-Seq IGF2R-PHF14 IGF2R chr6 160455554 + PHF14 chr7 11209042 + Exonic hg19 STAD TCGA-BR-A4PE 2 CDS-5'UTR Inter-chr q25.3 Oncogene Tumor suppressor gene p21.3 13663 ChimerSeq FusionScan TCGA_RNA-Seq SRSF3-PTCHD4 SRSF3 chr6 36566760 + PTCHD4 chr6 47976850 - Exonic hg19 STAD TCGA-BR-A4PE 2 Out-of-Frame Intra-chr p21.31 p12.3 Seq+ 13664 ChimerSeq FusionScan TCGA_RNA-Seq AMBRA1-ARHGAP1 AMBRA1 chr11 46563494 - ARHGAP1 chr11 46717706 - Exonic hg19 STAD TCGA-BR-A4PE 2 CDS-5'UTR Intra-chr p11.2 p11.2 Seq+ 13665 ChimerSeq FusionScan TCGA_RNA-Seq CCT6A-GBAS CCT6A chr7 56123490 + GBAS chr7 56045818 + Exonic hg19 STAD TCGA-BR-A4PE 2 Out-of-Frame Intra-chr p11.2 Seq+ 13666 ChimerSeq FusionScan TCGA_RNA-Seq RNF213-RBCK1 RNF213 chr17 78282971 + RBCK1 chr20 407956 + Exonic hg19 STAD TCGA-BR-A4PE 2 In-Frame Inter-chr q25.3 Oncogene p13 Transcription factor Seq+ 13667 ChimerSeq FusionScan TCGA_RNA-Seq RPS19-CEACAM3 RPS19 chr19 42365281 + CEACAM3 chr19 42314002 + Exonic hg19 STAD TCGA-BR-A4J1 68 Out-of-Frame Intra-chr q13.2 q13.2 Seq+ 13668 ChimerSeq FusionScan TCGA_RNA-Seq RPS19-CEACAM3 RPS19 chr19 42365281 + CEACAM3 chr19 42314360 + Exonic hg19 STAD TCGA-BR-A4J1 28 In-Frame Intra-chr q13.2 q13.2 Seq+ 13669 ChimerSeq FusionScan TCGA_RNA-Seq HDAC1-EIF3I HDAC1 chr1 32768334 + EIF3I chr1 32694099 + Exonic hg19 STAD TCGA-BR-A4J1 15 In-Frame Intra-chr p35.2 Tumor suppressor gene p35.2 Seq+ 13670 ChimerSeq FusionScan TCGA_RNA-Seq DDX11-TSPAN11 DDX11 chr12 31238060 + TSPAN11 chr12 31144790 + Exonic hg19 STAD TCGA-BR-A4J1 3 Out-of-Frame Intra-chr p11.21 p11.21 13671 ChimerSeq FusionScan TCGA_RNA-Seq GRTP1-CUL4A GRTP1 chr13 114005163 - CUL4A chr13 113917800 + Exonic hg19 STAD TCGA-BR-A4J1 2 In-Frame Intra-chr q34 q34 13672 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-PRDX1 RCC1 chr1 28834672 + PRDX1 chr1 45984726 - Exonic hg19 STAD TCGA-BR-A4J1 2 5'UTR-5'UTR Intra-chr p35.3 p34.1 13673 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-SLC35E2B RCC1 chr1 28834672 + SLC35E2B chr1 1608285 - Exonic hg19 STAD TCGA-BR-A4J1 2 5'UTR-5'UTR Intra-chr p35.3 p36.33 13674 ChimerSeq FusionScan TCGA_RNA-Seq RPS12-SLC22A1 RPS12 chr6 133135921 + SLC22A1 chr6 160579547 + Exonic hg19 STAD TCGA-BR-A4J1 2 In-Frame Intra-chr q23.2 q25.3 13675 ChimerSeq FusionScan TCGA_RNA-Seq CAPZA1-SNHG12 CAPZA1 chr1 113162505 + SNHG12 chr1 28906099 - Exonic hg19 STAD TCGA-BR-A4J1 2 CDS-3'UTR Intra-chr p13.2 p35.3 13676 ChimerSeq FusionScan TCGA_RNA-Seq TRAF6-C11orf74 TRAF6 chr11 36531597 - C11orf74 chr11 36631630 + Exonic hg19 STAD TCGA-BR-A4J1 2 5'UTR-5'UTR Intra-chr p12 p12 13677 ChimerSeq FusionScan TCGA_RNA-Seq ATXN7L1-UPF3A ATXN7L1 chr7 105429049 - UPF3A chr13 115051776 + Exonic hg19 STAD TCGA-BR-A4J1 2 In-Frame Inter-chr q22.3 q34 13678 ChimerSeq FusionScan TCGA_RNA-Seq LDLR-H2AFV LDLR chr19 11218190 + H2AFV chr7 44874161 - Exonic hg19 STAD TCGA-HU-A4G8 2 In-Frame Inter-chr p13.2 p13 13679 ChimerSeq FusionScan TCGA_RNA-Seq LGALS3-DNAJC15 LGALS3 chr14 55596018 + DNAJC15 chr13 43681313 + Exonic hg19 STAD TCGA-HU-A4G8 2 5'UTR-CDS Inter-chr q22.3 q14.11 13680 ChimerSeq FusionScan TCGA_RNA-Seq TMEM230-CDK5RAP1 TMEM230 chr20 5093606 - CDK5RAP1 chr20 31984890 - Exonic hg19 STAD TCGA-HU-A4G8 2 5'UTR-5'UTR Intra-chr p12.3 q11.21 13681 ChimerSeq FusionScan TCGA_RNA-Seq PAG1-IKZF1 PAG1 chr8 81982346 - IKZF1 chr7 50444230 + Exonic hg19 STAD TCGA-HU-A4G8 2 5'UTR-CDS Inter-chr q21.13 p12.2 Oncogene Tumor suppressor gene Transcription factor 13682 ChimerSeq FusionScan TCGA_RNA-Seq CDH4-GNAS CDH4 chr20 59829993 + GNAS chr20 57470666 + Exonic hg19 STAD TCGA-BR-8687 4 In-Frame Intra-chr q13.33 Tumor suppressor gene q13.32 Oncogene Seq+ 13683 ChimerSeq FusionScan TCGA_RNA-Seq SPRED1-FSIP1 SPRED1 chr15 38545418 + FSIP1 chr15 40034101 - Exonic hg19 STAD TCGA-BR-8687 2 Out-of-Frame Intra-chr q14 q14 13684 ChimerSeq FusionScan TCGA_RNA-Seq CHKA-CCNB3 CHKA chr11 67888294 - CCNB3 chrX 50027539 + Exonic hg19 STAD TCGA-BR-8687 2 CDS-5'UTR Inter-chr q13.2 p11.22 Seq+ 13685 ChimerSeq FusionScan TCGA_RNA-Seq CTDSPL-PMEPA1 CTDSPL chr3 37903769 + PMEPA1 chr20 56234753 - Exonic hg19 STAD TCGA-BR-8687 2 In-Frame Inter-chr p22.2 Tumor suppressor gene q13.31 13686 ChimerSeq FusionScan TCGA_RNA-Seq GATAD2B-YWHAZ GATAD2B chr1 153788748 - YWHAZ chr8 101932980 - Exonic hg19 STAD TCGA-BR-8687 2 Out-of-Frame Inter-chr Transcription factor q22.3 13687 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-CYSTM1 RCC1 chr1 28834672 + CYSTM1 chr5 139574030 + Exonic hg19 STAD TCGA-BR-8687 2 5'UTR-5'UTR Inter-chr p35.3 q31.3 13688 ChimerSeq FusionScan TCGA_RNA-Seq CHMP4C-ZFAND1 CHMP4C chr8 82645051 + ZFAND1 chr8 82630459 - Exonic hg19 STAD TCGA-BR-8687 2 In-Frame Intra-chr q21.13 q21.13 13689 ChimerSeq FusionScan TCGA_RNA-Seq MEF2A-BRE MEF2A chr15 100173378 + BRE chr2 28268591 + Exonic hg19 STAD TCGA-BR-8687 2 In-Frame Inter-chr q26.3 Transcription factor 13690 ChimerSeq FusionScan TCGA_RNA-Seq RAC1-EIF2AK1 RAC1 chr7 6431672 + EIF2AK1 chr7 6068663 - Exonic hg19 STAD TCGA-BR-8687 2 In-Frame Intra-chr p22.1 Oncogene p22.1 13691 ChimerSeq FusionScan TCGA_RNA-Seq PPM1B-ABCG8 PPM1B chr2 44396413 + ABCG8 chr2 44102284 + Exonic hg19 STAD TCGA-BR-8687 2 5'UTR-CDS Intra-chr p21 p21 Seq+ 13692 ChimerSeq FusionScan TCGA_RNA-Seq SEPT7-BBS9 SEPT7 chr7 35840882 + BBS9 chr7 33296847 + Exonic hg19 STAD TCGA-BR-4367 2 Out-of-Frame Intra-chr p14.2 p14.3 13693 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R1B-MIEN1 PPP1R1B chr17 37791979 + MIEN1 chr17 37886014 - Exonic hg19 STAD TCGA-VQ-A91X 24 In-Frame Intra-chr q12 Tumor suppressor gene q12 Seq+ 13694 ChimerSeq FusionScan TCGA_RNA-Seq DR1-CCDC18 DR1 chr1 93819628 + CCDC18 chr1 93730257 + Exonic hg19 STAD TCGA-VQ-A91X 6 In-Frame Intra-chr p22.1 Transcription factor p22.1 Seq+ 13695 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R1B-ACLY PPP1R1B chr17 37790339 + ACLY chr17 40058066 - Exonic hg19 STAD TCGA-VQ-A91X 5 Out-of-Frame Intra-chr q12 Tumor suppressor gene q21.2 Seq+ 13696 ChimerSeq FusionScan TCGA_RNA-Seq STARD3-ACLY STARD3 chr17 37818597 + ACLY chr17 40054092 - Exonic hg19 STAD TCGA-VQ-A91X 3 In-Frame Intra-chr q12 q21.2 Seq+ 13697 ChimerSeq FusionScan TCGA_RNA-Seq FBXW7-DNAJC16 FBXW7 chr4 153456092 - DNAJC16 chr1 15860731 + Exonic hg19 STAD TCGA-BR-8381 2 5'UTR-CDS Inter-chr q31.3 Oncogene Tumor suppressor gene p36.21 13698 ChimerSeq FusionScan TCGA_RNA-Seq ATG7-VGLL4 ATG7 chr3 11468400 + VGLL4 chr3 11643496 - Exonic hg19 STAD TCGA-BR-8381 2 Out-of-Frame Intra-chr p25.3 p25.2 13699 ChimerSeq FusionScan TCGA_RNA-Seq SLC44A3-SRSF11 SLC44A3 chr1 95332973 + SRSF11 chr1 70687297 + Exonic hg19 STAD TCGA-BR-8381 2 CDS-5'UTR Intra-chr p21.3 p31.1 13700 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-WIPF2 GRB7 chr17 37894645 + WIPF2 chr17 38430041 + Exonic hg19 STAD TCGA-BR-8381 2 5'UTR-CDS Intra-chr q12 q21.2 Seq+ 13701 ChimerSeq FusionScan TCGA_RNA-Seq TNKS2-PDCD4 TNKS2 chr10 93617287 + PDCD4 chr10 112640990 + Exonic hg19 STAD TCGA-BR-8381 2 In-Frame Intra-chr q23.32 q25.2 Tumor suppressor gene 13702 ChimerSeq FusionScan TCGA_RNA-Seq ILF3-POC5 ILF3 chr19 10794646 + POC5 chr5 74970403 - Exonic hg19 STAD TCGA-BR-8381 2 Out-of-Frame Inter-chr p13.2 q13.3 13703 ChimerSeq FusionScan TCGA_RNA-Seq ATP8A1-PDS5A ATP8A1 chr4 42551029 - PDS5A chr4 39865079 - Exonic hg19 STAD TCGA-CD-8536 6 In-Frame Intra-chr p13 p14 Seq+ 13704 ChimerSeq FusionScan TCGA_RNA-Seq RANBP9-AGFG1 RANBP9 chr6 13697016 - AGFG1 chr2 228416674 + Exonic hg19 STAD TCGA-CD-8536 2 Out-of-Frame Inter-chr p23 Tumor suppressor gene q36.3 13705 ChimerSeq FusionScan TCGA_RNA-Seq G2E3-PPFIA1 G2E3 chr14 31028478 + PPFIA1 chr11 70208200 + Exonic hg19 STAD TCGA-CD-8536 2 5'UTR-5'UTR Inter-chr q12 q13.3 13706 ChimerSeq FusionScan TCGA_RNA-Seq MFHAS1-SGK223 MFHAS1 chr8 8747570 - SGK223 chr8 8185977 - Exonic hg19 STAD TCGA-CD-8536 2 In-Frame Intra-chr p23.1 13707 ChimerSeq FusionScan TCGA_RNA-Seq CTNND1-GNB1 CTNND1 chr11 57529518 + GNB1 chr1 1770677 - Exonic hg19 STAD TCGA-CD-8536 2 5'UTR-5'UTR Inter-chr q12.1 Tumor suppressor gene p36.33 13708 ChimerSeq FusionScan TCGA_RNA-Seq SP3-SCRN3 SP3 chr2 174819600 - SCRN3 chr2 175287612 + Exonic hg19 STAD TCGA-BR-A4PD 6 In-Frame Intra-chr q31.1 Transcription factor q31.1 Seq+ 13709 ChimerSeq FusionScan TCGA_RNA-Seq SP3-MTX2 SP3 chr2 174819600 - MTX2 chr2 177161587 + Exonic hg19 STAD TCGA-BR-A4PD 3 In-Frame Intra-chr q31.1 Transcription factor q31.1 Seq+ 13710 ChimerSeq FusionScan TCGA_RNA-Seq ZNF227-AKAP9 ZNF227 chr19 44722005 + AKAP9 chr7 91671981 + Exonic hg19 STAD TCGA-BR-A4PD 3 In-Frame Inter-chr q13.31 Transcription factor q21.2 Oncogene Seq+ 13711 ChimerSeq FusionScan TCGA_RNA-Seq LSR-CAPNS1 LSR chr19 35741562 + CAPNS1 chr19 36640479 + Exonic hg19 STAD TCGA-BR-A4PD 2 In-Frame Intra-chr q13.12 q13.12 Seq+ 13712 ChimerSeq FusionScan TCGA_RNA-Seq MICALL2-WDR18 MICALL2 chr7 1498819 - WDR18 chr19 994018 + Exonic hg19 STAD TCGA-BR-A4PD 2 Out-of-Frame Inter-chr p22.3 p13.3 Seq+ 13713 ChimerSeq FusionScan TCGA_RNA-Seq SEC23A-KNTC1 SEC23A chr14 39572235 - KNTC1 chr12 123097658 + Exonic hg19 STAD TCGA-BR-A4PD 2 5'UTR-CDS Inter-chr q21.1 q24.31 13714 ChimerSeq FusionScan TCGA_RNA-Seq C7orf73-ACTR3B C7orf73 chr7 135357554 + ACTR3B chr7 152549210 + Exonic hg19 STAD TCGA-BR-A4PD 2 In-Frame Intra-chr q33 q36.1 13715 ChimerSeq FusionScan TCGA_RNA-Seq ATP6V1H-TCEA1 ATP6V1H chr8 54742003 - TCEA1 chr8 54923052 - Exonic hg19 STAD TCGA-BR-A4PD 2 In-Frame Intra-chr q11.23 q11.23 Seq+ 13716 ChimerSeq FusionScan TCGA_RNA-Seq ZNF7-CNBP ZNF7 chr8 146054989 + CNBP chr3 128890614 - Exonic hg19 STAD TCGA-BR-A4PD 2 CDS-5'UTR Inter-chr q24.3 Transcription factor q21.3 13717 ChimerSeq FusionScan TCGA_RNA-Seq GABPA-ATP5J GABPA chr21 27107889 + ATP5J chr21 27107965 - Exonic hg19 STAD TCGA-BR-A4PD 2 5'UTR-5'UTR Intra-chr q21.3 Transcription factor q21.3 13718 ChimerSeq FusionScan TCGA_RNA-Seq CNBP-SMARCB1 CNBP chr3 128902618 - SMARCB1 chr22 24175758 + Exonic hg19 STAD TCGA-BR-A4PD 2 5'UTR-CDS Inter-chr q21.3 q11.23 Oncogene Tumor suppressor gene Seq+ 13719 ChimerSeq FusionScan TCGA_RNA-Seq MITD1-CLNS1A MITD1 chr2 99790377 - CLNS1A chr11 77336115 - Exonic hg19 STAD TCGA-BR-A4PD 2 In-Frame Inter-chr q11.2 q14.1 13720 ChimerSeq FusionScan TCGA_RNA-Seq ARPC1B-ZNF498 ARPC1B chr7 98985884 + ZNF498 chr7 99218995 + Exonic hg19 STAD TCGA-BR-A4PD 2 Out-of-Frame Intra-chr q22.1 13721 ChimerSeq FusionScan TCGA_RNA-Seq UQCRC2-SEC31A UQCRC2 chr16 21987564 + SEC31A chr4 83803093 - Exonic hg19 STAD TCGA-BR-A4PD 2 CDS-5'UTR Inter-chr q21.22 Seq+ 13722 ChimerSeq FusionScan TCGA_RNA-Seq PARD3-WAPAL PARD3 chr10 35103803 - WAPAL chr10 88206206 - Exonic hg19 STAD TCGA-BR-A4PD 2 In-Frame Intra-chr p11.21 Seq+ 13723 ChimerSeq FusionScan TCGA_RNA-Seq MYO1B-LAMA2 MYO1B chr2 192141756 + LAMA2 chr6 129794358 + Exonic hg19 STAD TCGA-BR-A4PD 2 Out-of-Frame Inter-chr q32.3 q22.33 Seq+ 13724 ChimerSeq FusionScan TCGA_RNA-Seq RAN-DNTTIP1 RAN chr12 131356671 + DNTTIP1 chr20 44421315 + Exonic hg19 STAD TCGA-BR-A4PD 2 5'UTR-CDS Inter-chr q24.33 q13.12 Transcription factor 13725 ChimerSeq FusionScan TCGA_RNA-Seq ZNF83-PPP2R1A ZNF83 chr19 53138318 - PPP2R1A chr19 52705196 + Exonic hg19 STAD TCGA-BR-A4PD 2 5'UTR-5'UTR Intra-chr q13.41 Transcription factor q13.41 Oncogene 13726 ChimerSeq FusionScan TCGA_RNA-Seq FAM120B-NAPEPLD FAM120B chr6 170632347 + NAPEPLD chr7 102755621 - Exonic hg19 STAD TCGA-BR-A4PD 2 Out-of-Frame Inter-chr Tumor suppressor gene 13727 ChimerSeq FusionScan TCGA_RNA-Seq SERPINA4-SLC44A4 SERPINA4 chr14 95027831 + SLC44A4 chr6 31833903 - Exonic hg19 STAD TCGA-BR-A4PD 2 5'UTR-5'UTR Inter-chr q32.13 13728 ChimerSeq FusionScan TCGA_RNA-Seq MACF1-CLSPN MACF1 chr1 39905172 + CLSPN chr1 36219537 - Exonic hg19 STAD TCGA-BR-A4PD 2 Out-of-Frame Intra-chr p34.3 p34.3 13729 ChimerSeq FusionScan TCGA_RNA-Seq C9orf85-HPRT1 C9orf85 chr9 74526752 + HPRT1 chrX 133620494 + Exonic hg19 STAD TCGA-BR-A4PD 2 In-Frame Inter-chr q21.13 q26.2 13730 ChimerSeq FusionScan TCGA_RNA-Seq RBBP4-PLCB1 RBBP4 chr1 33138502 + PLCB1 chr20 8608940 + Exonic hg19 STAD TCGA-VQ-A91Q 11 In-Frame Inter-chr p35.1 p12.3 Seq+ 13731 ChimerSeq FusionScan TCGA_RNA-Seq DLG1-MUSK DLG1 chr3 197009549 - MUSK chr9 113457682 + Exonic hg19 STAD TCGA-VQ-A91Q 10 Out-of-Frame Inter-chr q29 Tumor suppressor gene q31.3 TK:Musk Seq+ 13732 ChimerSeq FusionScan TCGA_RNA-Seq RAF1-RBM47 RAF1 chr3 12660013 - RBM47 chr4 40440941 - Exonic hg19 STAD TCGA-VQ-A91Q 6 CDS-5'UTR Inter-chr p25.2 TKL:RAF Oncogene p14 13733 ChimerSeq FusionScan TCGA_RNA-Seq RAB3IP-LEMD3 RAB3IP chr12 70194117 + LEMD3 chr12 65604708 + Exonic hg19 STAD TCGA-VQ-A91Q 4 Out-of-Frame Intra-chr q15 q14.3 13734 ChimerSeq FusionScan TCGA_RNA-Seq RAB3IP-CNOT2 RAB3IP chr12 70178595 + CNOT2 chr12 70747608 + Exonic hg19 STAD TCGA-VQ-A91Q 2 In-Frame Intra-chr q15 q15 Seq+ 13735 ChimerSeq FusionScan TCGA_RNA-Seq TIMM17B-PQBP1 TIMM17B chrX 48755349 - PQBP1 chrX 48755212 + Exonic hg19 STAD TCGA-VQ-A91Q 2 5'UTR-5'UTR Intra-chr p11.23 p11.23 Seq+ 13736 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-RAB3IP CPSF6 chr12 69656342 + RAB3IP chr12 70149163 + Exonic hg19 STAD TCGA-VQ-A91Q 2 3'UTR-CDS Intra-chr q15 q15 Seq+ 13737 ChimerSeq FusionScan TCGA_RNA-Seq MEIS2-TRPM1 MEIS2 chr15 37329014 - TRPM1 chr15 31369187 - Exonic hg19 STAD TCGA-BR-4280 6 In-Frame Intra-chr q14 Transcription factor q13.3 Seq+ 13738 ChimerSeq FusionScan TCGA_RNA-Seq SLCO4A1-DNAJC5 SLCO4A1 chr20 61273905 + DNAJC5 chr20 62559687 + Exonic hg19 STAD TCGA-BR-4280 2 5'UTR-5'UTR Intra-chr q13.33 q13.33 13739 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-GSDMB RCC1 chr1 28834672 + GSDMB chr17 38065295 - Exonic hg19 STAD TCGA-BR-4280 2 5'UTR-CDS Inter-chr p35.3 q21.1 13740 ChimerSeq FusionScan TCGA_RNA-Seq ANKLE2-NOC4L ANKLE2 chr12 133338203 - NOC4L chr12 132635525 + Exonic hg19 STAD TCGA-BR-4280 2 In-Frame Intra-chr q24.33 q24.33 13741 ChimerSeq FusionScan TCGA_RNA-Seq UBE3A-RFX3 UBE3A chr15 25683635 - RFX3 chr9 3395596 - Exonic hg19 STAD TCGA-BR-4280 2 5'UTR-5'UTR Inter-chr q11.2 p24.2 Transcription factor 13742 ChimerSeq FusionScan TCGA_RNA-Seq ANKLE2-NOC4L ANKLE2 chr12 133338203 - NOC4L chr12 132635802 + Exonic hg19 STAD TCGA-BR-4280 2 Out-of-Frame Intra-chr q24.33 q24.33 13743 ChimerSeq FusionScan TCGA_RNA-Seq HSD17B11-NUDT9 HSD17B11 chr4 88303406 - NUDT9 chr4 88362980 + Exonic hg19 STAD TCGA-BR-4280 2 Out-of-Frame Intra-chr q22.1 q22.1 Seq+ 13744 ChimerSeq FusionScan TCGA_RNA-Seq RAD21-TDP1 RAD21 chr8 117878824 - TDP1 chr14 90499449 + Exonic hg19 STAD TCGA-BR-4280 2 In-Frame Inter-chr q24.11 q32.11 13745 ChimerSeq FusionScan TCGA_RNA-Seq ACTB-GLUD1 ACTB chr7 5567634 - GLUD1 chr10 88819998 - Exonic hg19 STAD TCGA-BR-4280 2 3'UTR-CDS Inter-chr p22.1 q23.2 13746 ChimerSeq FusionScan TCGA_RNA-Seq ILVBL-SLC12A2 ILVBL chr19 15236466 - SLC12A2 chr5 127503452 + Exonic hg19 STAD TCGA-BR-4280 2 5'UTR-5'UTR Inter-chr p13.12 q23.3 13747 ChimerSeq FusionScan TCGA_RNA-Seq WNK2-FAM120A WNK2 chr9 96021896 + FAM120A chr9 96259752 + Exonic hg19 STAD TCGA-VQ-A91Z 7 In-Frame Intra-chr q22.31 Tumor suppressor gene q22.31 Seq+ 13748 ChimerSeq FusionScan TCGA_RNA-Seq SLC38A10-TMEM131 SLC38A10 chr17 79244717 - TMEM131 chr2 98422166 - Exonic hg19 STAD TCGA-VQ-A91Z 4 In-Frame Inter-chr q25.3 q11.2 Seq+ 13749 ChimerSeq FusionScan TCGA_RNA-Seq RAD23B-U2SURP RAD23B chr9 110068928 + U2SURP chr3 142745990 + Exonic hg19 STAD TCGA-VQ-A91Z 2 In-Frame Inter-chr q31.2 Tumor suppressor gene q23 13750 ChimerSeq FusionScan TCGA_RNA-Seq RTN4-CCDC88A RTN4 chr2 55276880 - CCDC88A chr2 55646052 - Exonic hg19 STAD TCGA-HU-8610 3 Out-of-Frame Intra-chr p16.1 Tumor suppressor gene p16.1 13751 ChimerSeq FusionScan TCGA_RNA-Seq AKAP11-JMJD1C AKAP11 chr13 42882745 + JMJD1C chr10 64957323 - Exonic hg19 STAD TCGA-HU-8610 2 Out-of-Frame Inter-chr q14.11 q21.3 13752 ChimerSeq FusionScan TCGA_RNA-Seq BICD2-IPPK BICD2 chr9 95477534 - IPPK chr9 95420963 - Exonic hg19 STAD TCGA-HU-8610 2 In-Frame Intra-chr q22.31 q22.31 13753 ChimerSeq FusionScan TCGA_RNA-Seq LIN9-LPGAT1 LIN9 chr1 226496809 - LPGAT1 chr1 212002665 - Exonic hg19 STAD TCGA-HU-8610 2 CDS-5'UTR Intra-chr q42.12 Tumor suppressor gene q32.3 13754 ChimerSeq FusionScan TCGA_RNA-Seq PPP6R2-ADAM9 PPP6R2 chr22 50810579 + ADAM9 chr8 38959381 + Exonic hg19 STAD TCGA-CD-8532 3 5'UTR-5'UTR Inter-chr q13.33 13755 ChimerSeq FusionScan TCGA_RNA-Seq GLCE-GNAI3 GLCE chr15 69453096 + GNAI3 chr1 110116358 + Exonic hg19 STAD TCGA-CD-8532 2 5'UTR-CDS Inter-chr q23 p13.3 13756 ChimerSeq FusionScan TCGA_RNA-Seq CERS6-ACN9 CERS6 chr2 169313128 + ACN9 chr7 96810323 + Exonic hg19 STAD TCGA-CD-8532 2 Out-of-Frame Inter-chr q24.3 13757 ChimerSeq FusionScan TCGA_RNA-Seq HMGCS2-SF3B1 HMGCS2 chr1 120298049 - SF3B1 chr2 198257912 - Exonic hg19 STAD TCGA-CD-8532 2 In-Frame Inter-chr p12 q33.1 Oncogene 13758 ChimerSeq FusionScan TCGA_RNA-Seq MUC13-UMPS MUC13 chr3 124642373 - UMPS chr3 124456414 + Exonic hg19 STAD TCGA-CD-8532 2 In-Frame Intra-chr q21.2 q21.2 13759 ChimerSeq FusionScan TCGA_RNA-Seq PDGFD-PRCP PDGFD chr11 104034531 - PRCP chr11 82571159 - Exonic hg19 STAD TCGA-CD-8532 2 Out-of-Frame Intra-chr q22.3 q14.1 13760 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0528-NAA16 KIAA0528 chr12 22659644 - NAA16 chr13 41947772 + Exonic hg19 STAD TCGA-CD-8532 2 In-Frame Inter-chr q14.11 13761 ChimerSeq FusionScan TCGA_RNA-Seq GLCE-GNAS GLCE chr15 69453096 + GNAS chr20 57470666 + Exonic hg19 STAD TCGA-CD-8532 2 5'UTR-5'UTR Inter-chr q23 q13.32 Oncogene 13762 ChimerSeq FusionScan TCGA_RNA-Seq CASK-FHL2 CASK chrX 41598636 - FHL2 chr2 105990190 - Exonic hg19 STAD TCGA-CD-8532 2 In-Frame Inter-chr p11.4 CAMK:CASK q12.2 13763 ChimerSeq FusionScan TCGA_RNA-Seq CD247-SSH2 CD247 chr1 167487644 - SSH2 chr17 28030080 - Exonic hg19 STAD TCGA-D7-8570 2 Out-of-Frame Inter-chr q24.2 q11.2 Seq+ 13764 ChimerSeq FusionScan TCGA_RNA-Seq NTN1-STX8 NTN1 chr17 9124559 + STX8 chr17 9153962 - Exonic hg19 STAD TCGA-D7-8570 2 In-Frame Intra-chr p13.1 p13.1 Seq+ 13765 ChimerSeq FusionScan TCGA_RNA-Seq KCMF1-RTN4 KCMF1 chr2 85198590 + RTN4 chr2 55214834 - Exonic hg19 STAD TCGA-D7-8570 2 In-Frame Intra-chr p11.2 Transcription factor p16.1 Tumor suppressor gene Seq+ 13766 ChimerSeq FusionScan TCGA_RNA-Seq PNISR-FBXL4 PNISR chr6 99873090 - FBXL4 chr6 99353546 - Exonic hg19 STAD TCGA-D7-8574 3 5'UTR-CDS Intra-chr q16.2 q16.2 Seq+ 13767 ChimerSeq FusionScan TCGA_RNA-Seq CUL4B-SMG9 CUL4B chrX 119680990 - SMG9 chr19 44244370 - Exonic hg19 STAD TCGA-D7-8574 2 In-Frame Inter-chr q24 q13.31 13768 ChimerSeq FusionScan TCGA_RNA-Seq RBM33-RPL37A RBM33 chr7 155437613 + RPL37A chr2 217363992 + Exonic hg19 STAD TCGA-D7-8574 2 Out-of-Frame Inter-chr q36.3 q35 Seq+ 13769 ChimerSeq FusionScan TCGA_RNA-Seq C18orf1-TNRC6B C18orf1 chr18 13438383 + TNRC6B chr22 40642018 + Exonic hg19 STAD TCGA-D7-8574 2 Out-of-Frame Inter-chr q13.1 13770 ChimerSeq FusionScan TCGA_RNA-Seq SLC5A1-PIGR SLC5A1 chr22 32495338 + PIGR chr1 207119811 - Exonic hg19 STAD TCGA-D7-8574 2 CDS-5'UTR Inter-chr q12.3 q32.1 Seq+ 13771 ChimerSeq FusionScan TCGA_RNA-Seq RAB11FIP3-FAM195A RAB11FIP3 chr16 546859 + FAM195A chr16 697416 + Exonic hg19 STAD TCGA-VQ-A8P2 5 In-Frame Intra-chr 13772 ChimerSeq FusionScan TCGA_RNA-Seq TMEM194A-TAX1BP1 TMEM194A chr12 57456901 - TAX1BP1 chr7 27867356 + Exonic hg19 STAD TCGA-VQ-A8P2 2 Out-of-Frame Inter-chr p15.2 13773 ChimerSeq FusionScan TCGA_RNA-Seq AP1AR-WHSC1L1 AP1AR chr4 113153330 + WHSC1L1 chr8 38205733 - Exonic hg19 STAD TCGA-VQ-A8P2 2 CDS-5'UTR Inter-chr q25 p11.23 Tumor suppressor gene 13774 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-QRSL1 PVT1 chr8 128806980 + QRSL1 chr6 107110854 + Exonic hg19 STAD TCGA-BR-8373 17 5'UTR-CDS Inter-chr q24.21 q21 Seq+ 13775 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D15-LGR5 TBC1D15 chr12 72233591 + LGR5 chr12 71946852 + Exonic hg19 STAD TCGA-BR-8373 13 Out-of-Frame Intra-chr q21.1 q21.1 Seq+ 13776 ChimerSeq FusionScan TCGA_RNA-Seq DNM2-SLC44A2 DNM2 chr19 10893796 + SLC44A2 chr19 10745431 + Exonic hg19 STAD TCGA-BR-8373 13 Out-of-Frame Intra-chr p13.2 p13.2 Seq+ 13777 ChimerSeq FusionScan TCGA_RNA-Seq HEXB-FAM169A HEXB chr5 74001145 + FAM169A chr5 74078959 - Exonic hg19 STAD TCGA-BR-8373 11 In-Frame Intra-chr q13.3 q13.3 Seq+ 13778 ChimerSeq FusionScan TCGA_RNA-Seq MIB1-GREB1L MIB1 chr18 19359646 + GREB1L chr18 19088078 + Exonic hg19 STAD TCGA-BR-8373 6 Out-of-Frame Intra-chr q11.2 q11.1 Seq+ 13779 ChimerSeq FusionScan TCGA_RNA-Seq MBNL2-HS6ST3 MBNL2 chr13 97928663 + HS6ST3 chr13 97484743 + Exonic hg19 STAD TCGA-BR-8373 6 Out-of-Frame Intra-chr q32.1 Transcription factor q32.1 Seq+ 13780 ChimerSeq FusionScan TCGA_RNA-Seq SKI-PRKCZ SKI chr1 2235541 + PRKCZ chr1 2066700 + Exonic hg19 STAD TCGA-BR-8373 6 In-Frame Intra-chr p36.33 Transcription factor p36.33 Seq+ 13781 ChimerSeq FusionScan TCGA_RNA-Seq SMG5-PMF1 SMG5 chr1 156235571 - PMF1 chr1 156206078 + Exonic hg19 STAD TCGA-BR-8373 5 Out-of-Frame Intra-chr q22 q22 Seq+ 13782 ChimerSeq FusionScan TCGA_RNA-Seq IQGAP1-SEMA4B IQGAP1 chr15 90934105 + SEMA4B chr15 90760670 + Exonic hg19 STAD TCGA-BR-8373 5 Out-of-Frame Intra-chr q26.1 q26.1 Seq+ 13783 ChimerSeq FusionScan TCGA_RNA-Seq IKBKAP-EPB41L4B IKBKAP chr9 111696143 - EPB41L4B chr9 112042201 - Exonic hg19 STAD TCGA-BR-8373 5 5'UTR-CDS Intra-chr q31.3 q31.3 Seq+ 13784 ChimerSeq FusionScan TCGA_RNA-Seq C21orf59-URB1 C21orf59 chr21 33979958 - URB1 chr21 33750850 - Exonic hg19 STAD TCGA-BR-8373 5 In-Frame Intra-chr q22.11 q22.11 Seq+ 13785 ChimerSeq FusionScan TCGA_RNA-Seq ITGB5-ZNF148 ITGB5 chr3 124527868 - ZNF148 chr3 125032500 - Exonic hg19 STAD TCGA-BR-8373 5 CDS-5'UTR Intra-chr q21.2 q21.2 Transcription factor Seq+ 13786 ChimerSeq FusionScan TCGA_RNA-Seq GDI2-IL2RA GDI2 chr10 5815804 - IL2RA chr10 6054859 - Exonic hg19 STAD TCGA-BR-8373 4 Out-of-Frame Intra-chr p15.1 p15.1 Seq+ 13787 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHH1-MPP5 PLEKHH1 chr14 68008710 + MPP5 chr14 67759227 + Exonic hg19 STAD TCGA-BR-8373 4 Out-of-Frame Intra-chr q24.1 q23.3 Seq+ 13788 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP5-NPAS3 ARHGAP5 chr14 32563592 + NPAS3 chr14 33836391 + Exonic hg19 STAD TCGA-BR-8373 3 Out-of-Frame Intra-chr q12 q13.1 Transcription factor Seq+ 13789 ChimerSeq FusionScan TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104681470 + LHFPL3 chr7 104546633 + Exonic hg19 STAD TCGA-BR-8373 3 Out-of-Frame Intra-chr q22.2 Seq+ 13790 ChimerSeq FusionScan TCGA_RNA-Seq ANAPC5-KDM2B ANAPC5 chr12 121773335 - KDM2B chr12 121868272 - Exonic hg19 STAD TCGA-BR-8373 2 Out-of-Frame Intra-chr q24.31 q24.31 Transcription factor Seq+ 13791 ChimerSeq FusionScan TCGA_RNA-Seq REV3L-FYN REV3L chr6 111656671 - FYN chr6 112029223 - Exonic hg19 STAD TCGA-BR-8373 2 Out-of-Frame Intra-chr q21 q21 TK:Src Seq+ 13792 ChimerSeq FusionScan TCGA_RNA-Seq ACVR1B-ANKRD33 ACVR1B chr12 52374983 + ANKRD33 chr12 52282351 + Exonic hg19 STAD TCGA-BR-8373 2 In-Frame Intra-chr q13.13 Oncogene q13.13 Seq+ 13793 ChimerSeq FusionScan TCGA_RNA-Seq WWP2-NFAT5 WWP2 chr16 69876023 + NFAT5 chr16 69660305 + Exonic hg19 STAD TCGA-BR-8373 2 Out-of-Frame Intra-chr q22.1 q22.1 Transcription factor Seq+ 13794 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D15-LGR5 TBC1D15 chr12 72233591 + LGR5 chr12 71950398 + Exonic hg19 STAD TCGA-BR-8373 2 Out-of-Frame Intra-chr q21.1 q21.1 Seq+ 13795 ChimerSeq FusionScan TCGA_RNA-Seq ME1-SNAP91 ME1 chr6 84140595 - SNAP91 chr6 84350921 - Exonic hg19 STAD TCGA-BR-8373 2 Out-of-Frame Intra-chr q14.2 q14.2 Seq+ 13796 ChimerSeq FusionScan TCGA_RNA-Seq ADAMTS5-DLC1 ADAMTS5 chr21 28337606 - DLC1 chr8 12973166 - Exonic hg19 STAD TCGA-BR-A4J8 2 Out-of-Frame Inter-chr q21.3 p22 Tumor suppressor gene 13797 ChimerSeq FusionScan TCGA_RNA-Seq RPL10-HTATIP2 RPL10 chrX 153628967 + HTATIP2 chr11 20385782 + Exonic hg19 STAD TCGA-BR-A4J8 2 Out-of-Frame Inter-chr q28 Tumor suppressor gene p15.1 Tumor suppressor gene 13798 ChimerSeq FusionScan TCGA_RNA-Seq ORMDL1-B2M ORMDL1 chr2 190640290 - B2M chr15 45008526 + Exonic hg19 STAD TCGA-BR-A4J8 2 Out-of-Frame Inter-chr q32.2 Oncogene 13799 ChimerSeq FusionScan TCGA_RNA-Seq LIMA1-ARID2 LIMA1 chr12 50642415 - ARID2 chr12 46285562 + Exonic hg19 STAD TCGA-BR-A4J8 2 In-Frame Intra-chr q13.12 Tumor suppressor gene q12 Oncogene Tumor suppressor gene Transcription factor 13800 ChimerSeq FusionScan TCGA_RNA-Seq PTBP2-NUP54 PTBP2 chr1 97243502 + NUP54 chr4 77045909 - Exonic hg19 STAD TCGA-BR-A4J8 2 In-Frame Inter-chr p21.3 q21.1 13801 ChimerSeq FusionScan TCGA_RNA-Seq CALU-C7orf73 CALU chr7 128379486 + C7orf73 chr7 135357500 + Exonic hg19 STAD TCGA-IN-7808 2 5'UTR-CDS Intra-chr q32.1 q33 Seq+ 13802 ChimerSeq FusionScan TCGA_RNA-Seq IGLL5-CRCP IGLL5 chr22 23230439 + CRCP chr7 65610429 + Exonic hg19 STAD TCGA-IN-7808 2 In-Frame Inter-chr q11.22 q11.21 Seq+ 13803 ChimerSeq FusionScan TCGA_RNA-Seq IP6K2-GNB3 IP6K2 chr3 48732522 - GNB3 chr12 6952940 + Exonic hg19 STAD TCGA-IN-7808 2 Out-of-Frame Inter-chr p21.31 p13.31 Seq+ 13804 ChimerSeq FusionScan TCGA_RNA-Seq PSMD11-UTP18 PSMD11 chr17 30774064 + UTP18 chr17 49357365 + Exonic hg19 STAD TCGA-IN-7808 2 In-Frame Intra-chr q11.2 q21.33 13805 ChimerSeq FusionScan TCGA_RNA-Seq ST8SIA1-NAA16 ST8SIA1 chr12 22486930 - NAA16 chr13 41929279 + Exonic hg19 STAD TCGA-IN-7808 2 Out-of-Frame Inter-chr p12.1 q14.11 Seq+ 13806 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175394270 - Exonic hg19 STAD TCGA-IN-7808 2 5'UTR-CDS Inter-chr q21.1 q35.2 13807 ChimerSeq FusionScan TCGA_RNA-Seq FAM83E-SEC16A FAM83E chr19 49113132 - SEC16A chr9 139348779 - Exonic hg19 STAD TCGA-IN-7808 2 Out-of-Frame Inter-chr q13.33 q34.3 13808 ChimerSeq FusionScan TCGA_RNA-Seq C11orf74-PAMR1 C11orf74 chr11 36616142 + PAMR1 chr11 35515820 - Exonic hg19 STAD TCGA-IN-7808 2 5'UTR-CDS Intra-chr p12 p13 Seq+ 13809 ChimerSeq FusionScan TCGA_RNA-Seq ZNF271-MAPRE2 ZNF271 chr18 32871196 + MAPRE2 chr18 32706911 + Exonic hg19 STAD TCGA-BR-4369 3 5'UTR-5'UTR Intra-chr q12.1 Seq+ 13810 ChimerSeq FusionScan TCGA_RNA-Seq CLIP1-TNIK CLIP1 chr12 122861935 - TNIK chr3 170908576 - Exonic hg19 STAD TCGA-BR-4369 2 In-Frame Inter-chr q24.31 q26.31 STE:STE20 Seq+ 13811 ChimerSeq FusionScan TCGA_RNA-Seq PNPT1-FBXO11 PNPT1 chr2 55910919 - FBXO11 chr2 48050499 - Exonic hg19 STAD TCGA-D7-A6F2 2 In-Frame Intra-chr p16.1 p16.3 13812 ChimerSeq FusionScan TCGA_RNA-Seq POLG-FANCI POLG chr15 89876326 - FANCI chr15 89828326 + Exonic hg19 STAD TCGA-D7-A6F2 2 Out-of-Frame Intra-chr q26.1 q26.1 Seq+ 13813 ChimerSeq FusionScan TCGA_RNA-Seq CASZ1-HMGN2 CASZ1 chr1 10856620 - HMGN2 chr1 26799973 + Exonic hg19 STAD TCGA-D7-A6F2 2 5'UTR-CDS Intra-chr p36.22 Transcription factor p36.11 13814 ChimerSeq FusionScan TCGA_RNA-Seq STK4-IYD STK4 chr20 43625947 + IYD chr6 150713480 + Exonic hg19 STAD TCGA-D7-A6F2 2 Out-of-Frame Inter-chr q13.12 q25.1 13815 ChimerSeq FusionScan TCGA_RNA-Seq SNX5-RRBP1 SNX5 chr20 17934639 - RRBP1 chr20 17641173 - Exonic hg19 STAD TCGA-KB-A93H 6 CDS-5'UTR Intra-chr p11.23 p12.1 13816 ChimerSeq FusionScan TCGA_RNA-Seq YWHAE-ABR YWHAE chr17 1303340 - ABR chr17 1028702 - Exonic hg19 STAD TCGA-KB-A93H 2 In-Frame Intra-chr p13.3 p13.3 Seq+ 13817 ChimerSeq FusionScan TCGA_RNA-Seq GMEB1-YTHDF2 GMEB1 chr1 29010252 + YTHDF2 chr1 29064169 + Exonic hg19 STAD TCGA-KB-A93H 2 Out-of-Frame Intra-chr p35.3 Transcription factor p35.3 13818 ChimerSeq FusionScan TCGA_RNA-Seq CDC42EP4-AMZ2 CDC42EP4 chr17 71308031 - AMZ2 chr17 66244780 + Exonic hg19 STAD TCGA-D7-6820 7 5'UTR-5'UTR Intra-chr q25.1 q24.2 Seq+ 13819 ChimerSeq FusionScan TCGA_RNA-Seq AMZ2-SLC16A6 AMZ2 chr17 66247319 + SLC16A6 chr17 66274468 - Exonic hg19 STAD TCGA-D7-6820 3 CDS-5'UTR Intra-chr q24.2 q24.2 Seq+ 13820 ChimerSeq FusionScan TCGA_RNA-Seq GMDS-IP6K2 GMDS chr6 2245554 - IP6K2 chr3 48730612 - Exonic hg19 STAD TCGA-D7-6820 2 Out-of-Frame Inter-chr p25.3 p21.31 13821 ChimerSeq FusionScan TCGA_RNA-Seq SGPP2-CAPN7 SGPP2 chr2 223339445 + CAPN7 chr3 15281979 + Exonic hg19 STAD TCGA-BR-8363 2 In-Frame Inter-chr q36.1 p25.1 13822 ChimerSeq FusionScan TCGA_RNA-Seq MYOCD-ARHGAP44 MYOCD chr17 12664024 + ARHGAP44 chr17 12798256 + Exonic hg19 STAD TCGA-RD-A7BW 2 Out-of-Frame Intra-chr p12 p12 Seq+ 13823 ChimerSeq FusionScan TCGA_RNA-Seq TRAPPC8-SMAD4 TRAPPC8 chr18 29477748 - SMAD4 chr18 48581150 + Exonic hg19 STAD TCGA-RD-A7BW 2 Out-of-Frame Intra-chr q12.1 q21.2 Oncogene Tumor suppressor gene Transcription factor 13824 ChimerSeq FusionScan TCGA_RNA-Seq ALDH3B1-CHKA ALDH3B1 chr11 67782929 + CHKA chr11 67864597 - Exonic hg19 STAD TCGA-RD-A7BW 2 Out-of-Frame Intra-chr q13.2 q13.2 13825 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-FAM120A CPSF6 chr12 69656342 + FAM120A chr9 96305503 + Exonic hg19 STAD TCGA-RD-A7BW 2 3'UTR-CDS Inter-chr q15 q22.31 13826 ChimerSeq FusionScan TCGA_RNA-Seq CDH11-MRPS28 CDH11 chr16 65087706 - MRPS28 chr8 80915415 - Exonic hg19 STAD TCGA-RD-A7BW 2 5'UTR-CDS Inter-chr q21 Oncogene Tumor suppressor gene q21.13 13827 ChimerSeq FusionScan TCGA_RNA-Seq TNFAIP8-COMMD10 TNFAIP8 chr5 118604602 + COMMD10 chr5 115627213 + Exonic hg19 STAD TCGA-RD-A7BW 2 Out-of-Frame Intra-chr q23.1 q23.1 13828 ChimerSeq FusionScan TCGA_RNA-Seq MARK2-RTN3 MARK2 chr11 63607032 + RTN3 chr11 63517462 + Exonic hg19 STAD TCGA-BR-7851 3 Out-of-Frame Intra-chr q13.1 CAMK:CAMKL q13.1 Seq+ 13829 ChimerSeq FusionScan TCGA_RNA-Seq PRKAR1A-GNAS PRKAR1A chr17 66508689 + GNAS chr20 57470666 + Exonic hg19 STAD TCGA-BR-7851 2 5'UTR-5'UTR Inter-chr q24.2 Oncogene Tumor suppressor gene q13.32 Oncogene 13830 ChimerSeq FusionScan TCGA_RNA-Seq TMEM131-SPATA6 TMEM131 chr2 98543888 - SPATA6 chr1 48771550 - Exonic hg19 STAD TCGA-BR-7851 2 In-Frame Inter-chr q11.2 p33 13831 ChimerSeq FusionScan TCGA_RNA-Seq NVL-ENAH NVL chr1 224492437 - ENAH chr1 225700718 - Exonic hg19 STAD TCGA-BR-7851 2 In-Frame Intra-chr q42.11 q42.12 13832 ChimerSeq FusionScan TCGA_RNA-Seq PARK2-SOS2 PARK2 chr6 162394333 - SOS2 chr14 50587102 - Exonic hg19 STAD TCGA-BR-7851 2 Out-of-Frame Inter-chr Tumor suppressor gene q21.3 13833 ChimerSeq FusionScan TCGA_RNA-Seq LRRK1-EP400 LRRK1 chr15 101529603 + EP400 chr12 132464238 + Exonic hg19 STAD TCGA-BR-7851 2 In-Frame Inter-chr q26.3 TKL:LRRK q24.33 Oncogene 13834 ChimerSeq FusionScan TCGA_RNA-Seq PPFIA1-ANO1 PPFIA1 chr11 70118542 + ANO1 chr11 70016992 + Exonic hg19 STAD TCGA-VQ-A91Y 8 Out-of-Frame Intra-chr q13.3 q13.3 Seq+ 13835 ChimerSeq FusionScan TCGA_RNA-Seq ABHD2-AKAP13 ABHD2 chr15 89659752 + AKAP13 chr15 86118361 + Exonic hg19 STAD TCGA-VQ-A91Y 2 In-Frame Intra-chr q26.1 q25.3 13836 ChimerSeq FusionScan TCGA_RNA-Seq SRSF11-JUP SRSF11 chr1 70671463 + JUP chr17 39914036 - Exonic hg19 STAD TCGA-VQ-A91Y 2 5'UTR-CDS Inter-chr p31.1 q21.2 Tumor suppressor gene 13837 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB17-EPHA2 ZBTB17 chr1 16273429 - EPHA2 chr1 16451815 - Exonic hg19 STAD TCGA-VQ-A91Y 2 Out-of-Frame Intra-chr p36.13 Transcription factor p36.13 Tumor suppressor gene 13838 ChimerSeq FusionScan TCGA_RNA-Seq PRKCA-NCOR1 PRKCA chr17 64641629 + NCOR1 chr17 15943808 - Exonic hg19 STAD TCGA-VQ-A91Y 2 In-Frame Intra-chr q24.2 p11.2 Oncogene 13839 ChimerSeq FusionScan TCGA_RNA-Seq PSMD4-CERS2 PSMD4 chr1 151227284 + CERS2 chr1 150941567 - Exonic hg19 STAD TCGA-VQ-A91Y 2 CDS-5'UTR Intra-chr q21.3 q21.3 13840 ChimerSeq FusionScan TCGA_RNA-Seq MYBL2-PSMA3 MYBL2 chr20 42315712 + PSMA3 chr14 58730422 + Exonic hg19 STAD TCGA-VQ-A923 2 Out-of-Frame Inter-chr q13.12 Transcription factor q23.1 13841 ChimerSeq FusionScan TCGA_RNA-Seq PKN1-ZNF564 PKN1 chr19 14562835 + ZNF564 chr19 12639510 - Exonic hg19 STAD TCGA-VQ-A923 2 Out-of-Frame Intra-chr p13.12 AGC:PKN p13.2 Transcription factor 13842 ChimerSeq FusionScan TCGA_RNA-Seq FOXA3-CYP2C9 FOXA3 chr19 46367783 + CYP2C9 chr10 96701614 + Exonic hg19 STAD TCGA-VQ-A923 2 In-Frame Inter-chr q13.32 Transcription factor q23.33 13843 ChimerSeq FusionScan TCGA_RNA-Seq CHAMP1-COL4A2 CHAMP1 chr13 115086707 + COL4A2 chr13 111160281 + Exonic hg19 STAD TCGA-VQ-A922 11 5'UTR-CDS Intra-chr q34 Transcription factor q34 Seq+ 13844 ChimerSeq FusionScan TCGA_RNA-Seq C6orf106-DEFB110 C6orf106 chr6 34614377 - DEFB110 chr6 49976984 - Exonic hg19 STAD TCGA-VQ-A922 10 In-Frame Intra-chr p21.31 p12.3 Seq+ 13845 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPR-CNR2 HNRNPR chr1 23660010 - CNR2 chr1 24202152 - Exonic hg19 STAD TCGA-VQ-A922 7 CDS-5'UTR Intra-chr p36.11 Seq+ 13846 ChimerSeq FusionScan TCGA_RNA-Seq SPTBN1-SPAG5 SPTBN1 chr2 54826380 + SPAG5 chr17 26920084 - Exonic hg19 STAD TCGA-VQ-A922 5 In-Frame Inter-chr p16.2 Tumor suppressor gene q11.2 Seq+ 13847 ChimerSeq FusionScan TCGA_RNA-Seq LYRM5-LRMP LYRM5 chr12 25348271 + LRMP chr12 25259876 + Exonic hg19 STAD TCGA-VQ-A922 5 5'UTR-CDS Intra-chr p12.1 Tumor suppressor gene Seq+ 13848 ChimerSeq FusionScan TCGA_RNA-Seq DGKA-DSG1 DGKA chr12 56334217 + DSG1 chr18 28908151 + Exonic hg19 STAD TCGA-VQ-A922 5 In-Frame Inter-chr q13.2 q12.1 Seq+ 13849 ChimerSeq FusionScan TCGA_RNA-Seq EIF2C2-TRAPPC9 EIF2C2 chr8 141645583 - TRAPPC9 chr8 141461482 - Exonic hg19 STAD TCGA-VQ-A922 4 Out-of-Frame Intra-chr q24.3 13850 ChimerSeq FusionScan TCGA_RNA-Seq ABI2-SPATS2L ABI2 chr2 204231767 + SPATS2L chr2 201253945 + Exonic hg19 STAD TCGA-VQ-A922 4 CDS-5'UTR Intra-chr q33.2 Tumor suppressor gene q33.1 Seq+ 13851 ChimerSeq FusionScan TCGA_RNA-Seq MPHOSPH9-PTPRR MPHOSPH9 chr12 123705918 - PTPRR chr12 71095103 - Exonic hg19 STAD TCGA-VQ-A922 4 In-Frame Intra-chr q24.31 q15 Seq+ 13852 ChimerSeq FusionScan TCGA_RNA-Seq SEC16A-ABCA2 SEC16A chr9 139377389 - ABCA2 chr9 139916930 - Exonic hg19 STAD TCGA-VQ-A922 4 5'UTR-CDS Intra-chr q34.3 q34.3 13853 ChimerSeq FusionScan TCGA_RNA-Seq C16orf72-ABAT C16orf72 chr16 9197116 + ABAT chr16 8851613 + Exonic hg19 STAD TCGA-VQ-A922 3 In-Frame Intra-chr p13.2 p13.2 Seq+ 13854 ChimerSeq FusionScan TCGA_RNA-Seq DIS3-KLF12 DIS3 chr13 73345932 - KLF12 chr13 74420510 - Exonic hg19 STAD TCGA-VQ-A922 3 In-Frame Intra-chr q21.33 q22.1 Transcription factor Seq+ 13855 ChimerSeq FusionScan TCGA_RNA-Seq RRBP1-PCSK2 RRBP1 chr20 17596075 - PCSK2 chr20 17462228 + Exonic hg19 STAD TCGA-VQ-A922 3 Out-of-Frame Intra-chr p12.1 p12.1 Seq+ 13856 ChimerSeq FusionScan TCGA_RNA-Seq ATG5-SCML4 ATG5 chr6 106727535 - SCML4 chr6 108093590 - Exonic hg19 STAD TCGA-VQ-A922 3 CDS-5'UTR Intra-chr q21 q21 Transcription factor Seq+ 13857 ChimerSeq FusionScan TCGA_RNA-Seq AFF1-ABL2 AFF1 chr4 88016121 + ABL2 chr1 179102509 - Exonic hg19 STAD TCGA-VQ-A922 2 Out-of-Frame Inter-chr q21.3 Oncogene q25.2 TK:Abl Oncogene 13858 ChimerSeq FusionScan TCGA_RNA-Seq UBE2J2-NARF UBE2J2 chr1 1192371 - NARF chr17 80417867 + Exonic hg19 STAD TCGA-VQ-A922 2 In-Frame Inter-chr p36.33 q25.3 13859 ChimerSeq FusionScan TCGA_RNA-Seq FANCD2-WDR93 FANCD2 chr3 10107663 + WDR93 chr15 90260141 + Exonic hg19 STAD TCGA-VQ-A922 2 In-Frame Inter-chr p25.3 Oncogene q26.1 Seq+ 13860 ChimerSeq FusionScan TCGA_RNA-Seq PPP3CC-XPO7 PPP3CC chr8 22298971 + XPO7 chr8 21851873 + Exonic hg19 STAD TCGA-VQ-A922 2 Out-of-Frame Intra-chr p21.3 Tumor suppressor gene p21.3 Seq+ 13861 ChimerSeq FusionScan TCGA_RNA-Seq GPR126-VNN1 GPR126 chr6 142630781 + VNN1 chr6 133015321 - Exonic hg19 STAD TCGA-VQ-A922 2 Out-of-Frame Intra-chr q23.2 13862 ChimerSeq FusionScan TCGA_RNA-Seq MAP3K5-IFNGR1 MAP3K5 chr6 137112847 - IFNGR1 chr6 137528214 - Exonic hg19 STAD TCGA-VQ-A922 2 In-Frame Intra-chr q23.3 STE:STE11 q23.3 Seq+ 13863 ChimerSeq FusionScan TCGA_RNA-Seq TGFB1-ERF TGFB1 chr19 41850651 - ERF chr19 42754717 - Exonic hg19 STAD TCGA-VQ-A922 2 In-Frame Intra-chr q13.2 Tumor suppressor gene q13.2 Tumor suppressor gene Transcription factor 13864 ChimerSeq FusionScan TCGA_RNA-Seq PKP3-PSMD13 PKP3 chr11 397445 + PSMD13 chr11 247276 + Exonic hg19 STAD TCGA-VQ-A922 2 Out-of-Frame Intra-chr p15.5 p15.5 13865 ChimerSeq FusionScan TCGA_RNA-Seq PRKAR2A-QRICH1 PRKAR2A chr3 48884767 - QRICH1 chr3 49084012 - Exonic hg19 STAD TCGA-VQ-A922 2 In-Frame Intra-chr p21.31 p21.31 13866 ChimerSeq FusionScan TCGA_RNA-Seq PRKCZ-ATAD3C PRKCZ chr1 1991030 + ATAD3C chr1 1403763 + Exonic hg19 STAD TCGA-VQ-A922 2 Out-of-Frame Intra-chr p36.33 p36.33 Seq+ 13867 ChimerSeq FusionScan TCGA_RNA-Seq REPS2-TXLNG REPS2 chrX 17121902 + TXLNG chrX 16847698 + Exonic hg19 STAD TCGA-VQ-A922 2 In-Frame Intra-chr p22.2 p22.2 Seq+ 13868 ChimerSeq FusionScan TCGA_RNA-Seq ABTB2-EHF ABTB2 chr11 34378247 - EHF chr11 34664174 + Exonic hg19 STAD TCGA-VQ-A922 2 Out-of-Frame Intra-chr p13 p13 Tumor suppressor gene Transcription factor Seq+ 13869 ChimerSeq FusionScan TCGA_RNA-Seq EPHB2-ZBTB40 EPHB2 chr1 23037536 + ZBTB40 chr1 22816372 + Exonic hg19 STAD TCGA-VQ-A922 2 CDS-5'UTR Intra-chr p36.12 Tumor suppressor gene p36.12 Transcription factor Seq+ 13870 ChimerSeq FusionScan TCGA_RNA-Seq KIF16B-RRBP1 KIF16B chr20 16553873 - RRBP1 chr20 17660720 - Exonic hg19 STAD TCGA-VQ-A922 2 CDS-5'UTR Intra-chr p12.1 p12.1 Seq+ 13871 ChimerSeq FusionScan TCGA_RNA-Seq GPX4-SPNS3 GPX4 chr19 1105808 + SPNS3 chr17 4381866 + Exonic hg19 STAD TCGA-VQ-A922 2 Out-of-Frame Inter-chr p13.3 p13.2 Seq+ 13872 ChimerSeq FusionScan TCGA_RNA-Seq DSG1-TNXB DSG1 chr18 28919988 + TNXB chr6 32038191 - Exonic hg19 STAD TCGA-VQ-A922 2 CDS-5'UTR Inter-chr q12.1 Seq+ 13873 ChimerSeq FusionScan TCGA_RNA-Seq RNF19A-ANKRD46 RNF19A chr8 101276898 - ANKRD46 chr8 101545539 - Exonic hg19 STAD TCGA-VQ-A922 2 CDS-5'UTR Intra-chr q22.2 q22.3 Seq+ 13874 ChimerSeq FusionScan TCGA_RNA-Seq RNF19A-ANKRD46 RNF19A chr8 101281012 - ANKRD46 chr8 101545539 - Exonic hg19 STAD TCGA-VQ-A922 2 CDS-5'UTR Intra-chr q22.2 q22.3 Seq+ 13875 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHG1-MTHFD1L PLEKHG1 chr6 151055228 + MTHFD1L chr6 151413602 + Exonic hg19 STAD TCGA-BR-8591 4 In-Frame Intra-chr q25.1 q25.1 Seq+ 13876 ChimerSeq FusionScan TCGA_RNA-Seq CASP7-C10orf81 CASP7 chr10 115457362 + C10orf81 chr10 115540360 + Exonic hg19 STAD TCGA-BR-8591 2 In-Frame Intra-chr q25.3 13877 ChimerSeq FusionScan TCGA_RNA-Seq RSRC1-RAB14 RSRC1 chr3 157921034 + RAB14 chr9 123955697 - Exonic hg19 STAD TCGA-BR-8591 2 CDS-5'UTR Inter-chr q25.32 q33.2 13878 ChimerSeq FusionScan TCGA_RNA-Seq CTBP2-CTNNB1 CTBP2 chr10 126799558 - CTNNB1 chr3 41265511 + Exonic hg19 STAD TCGA-D7-6822 17 5'UTR-5'UTR Inter-chr q26.13 p22.1 Oncogene Seq+ 13879 ChimerSeq FusionScan TCGA_RNA-Seq PTCH1-FANCC PTCH1 chr9 98238315 - FANCC chr9 97879672 - Exonic hg19 STAD TCGA-D7-6822 16 In-Frame Intra-chr q22.32 Oncogene Tumor suppressor gene q22.32 Oncogene Seq+ 13880 ChimerSeq FusionScan TCGA_RNA-Seq PUM1-KANSL1 PUM1 chr1 31532050 - KANSL1 chr17 44145033 - Exonic hg19 STAD TCGA-D7-6822 15 Out-of-Frame Inter-chr p35.2 Seq+ 13881 ChimerSeq FusionScan TCGA_RNA-Seq CCNT2-YSK4 CCNT2 chr2 135705469 + YSK4 chr2 135722486 - Exonic hg19 STAD TCGA-D7-6822 12 Out-of-Frame Intra-chr q21.3 Seq+ 13882 ChimerSeq FusionScan TCGA_RNA-Seq CTBP2-CTNNB1 CTBP2 chr10 126848887 - CTNNB1 chr3 41265511 + Exonic hg19 STAD TCGA-D7-6822 11 5'UTR-5'UTR Inter-chr q26.13 p22.1 Oncogene Seq+ 13883 ChimerSeq FusionScan TCGA_RNA-Seq TPM3-DENND4B TPM3 chr1 154155463 - DENND4B chr1 153910339 - Exonic hg19 STAD TCGA-D7-6822 7 In-Frame Intra-chr q21.3 q21.3 Seq+ 13884 ChimerSeq FusionScan TCGA_RNA-Seq SKI-FAF1 SKI chr1 2161174 + FAF1 chr1 51267349 - Exonic hg19 STAD TCGA-D7-6822 7 In-Frame Intra-chr p36.33 Transcription factor p32.3 Seq+ 13885 ChimerSeq FusionScan TCGA_RNA-Seq PSMD4-S100A10 PSMD4 chr1 151234777 + S100A10 chr1 151955800 - Exonic hg19 STAD TCGA-D7-6822 6 Out-of-Frame Intra-chr q21.3 q21.3 Seq+ 13886 ChimerSeq FusionScan TCGA_RNA-Seq FAF1-SKI FAF1 chr1 51425438 - SKI chr1 2234416 + Exonic hg19 STAD TCGA-D7-6822 5 In-Frame Intra-chr p32.3 p36.33 Transcription factor Seq+ 13887 ChimerSeq FusionScan TCGA_RNA-Seq KCNQ1-CD81 KCNQ1 chr11 2466714 + CD81 chr11 2411641 + Exonic hg19 STAD TCGA-D7-6822 4 Out-of-Frame Intra-chr p15.5 p15.5 Seq+ 13888 ChimerSeq FusionScan TCGA_RNA-Seq TMED10-MLH3 TMED10 chr14 75614366 - MLH3 chr14 75497405 - Exonic hg19 STAD TCGA-D7-6822 4 Out-of-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene Seq+ 13889 ChimerSeq FusionScan TCGA_RNA-Seq NIPBL-WDR70 NIPBL chr5 37061120 + WDR70 chr5 37752587 + Exonic hg19 STAD TCGA-D7-6822 4 Out-of-Frame Intra-chr p13.2 p13.2 Seq+ 13890 ChimerSeq FusionScan TCGA_RNA-Seq FLAD1-PRUNE FLAD1 chr1 154956542 + PRUNE chr1 150999708 + Exonic hg19 STAD TCGA-D7-6822 4 Out-of-Frame Intra-chr q21.3 Seq+ 13891 ChimerSeq FusionScan TCGA_RNA-Seq ARID4B-TOMM20 ARID4B chr1 235490228 - TOMM20 chr1 235285687 - Exonic hg19 STAD TCGA-D7-6822 3 Out-of-Frame Intra-chr q42.3 q42.3 Seq+ 13892 ChimerSeq FusionScan TCGA_RNA-Seq C6orf147-DDX43 C6orf147 chr6 74001720 - DDX43 chr6 74123380 + Exonic hg19 STAD TCGA-D7-6822 2 3'UTR-CDS Intra-chr q13 13893 ChimerSeq FusionScan TCGA_RNA-Seq BRF1-NUDT14 BRF1 chr14 105752632 - NUDT14 chr14 105644072 - Exonic hg19 STAD TCGA-D7-6822 2 Out-of-Frame Intra-chr q32.33 Tumor suppressor gene q32.33 Seq+ 13894 ChimerSeq FusionScan TCGA_RNA-Seq SORD-IKZF3 SORD chr15 45335619 + IKZF3 chr17 37949186 - Exonic hg19 STAD TCGA-D7-6822 2 In-Frame Inter-chr q21.1 q21.1 Tumor suppressor gene Transcription factor Seq+ 13895 ChimerSeq FusionScan TCGA_RNA-Seq TRAPPC12-COLEC11 TRAPPC12 chr2 3428434 + COLEC11 chr2 3651904 + Exonic hg19 STAD TCGA-D7-6822 2 In-Frame Intra-chr p25.3 Seq+ 13896 ChimerSeq FusionScan TCGA_RNA-Seq USP39-VAMP8 USP39 chr2 85830204 + VAMP8 chr2 85808698 + Exonic hg19 STAD TCGA-D7-6519 9 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 13897 ChimerSeq FusionScan TCGA_RNA-Seq F11R-PVRL4 F11R chr1 160990799 - PVRL4 chr1 161049739 - Exonic hg19 STAD TCGA-D7-6519 6 In-Frame Intra-chr q23.3 Seq+ 13898 ChimerSeq FusionScan TCGA_RNA-Seq FRS2-GRIP1 FRS2 chr12 69925836 + GRIP1 chr12 66786596 - Exonic hg19 STAD TCGA-D7-6519 6 5'UTR-CDS Intra-chr q15 q14.3 Seq+ 13899 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57917128 + Exonic hg19 STAD TCGA-D7-6519 3 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 13900 ChimerSeq FusionScan TCGA_RNA-Seq GAS5-XXYLT1 GAS5 chr1 173835314 - XXYLT1 chr3 194947585 - Exonic hg19 STAD TCGA-D7-6519 2 3'UTR-CDS Inter-chr q25.1 Tumor suppressor gene q29 13901 ChimerSeq FusionScan TCGA_RNA-Seq LEMD3-MDM1 LEMD3 chr12 65564898 + MDM1 chr12 68707533 - Exonic hg19 STAD TCGA-D7-6519 2 Out-of-Frame Intra-chr q14.3 q15 13902 ChimerSeq FusionScan TCGA_RNA-Seq ZNF431-APP ZNF431 chr19 21350469 + APP chr21 27484463 - Exonic hg19 STAD TCGA-D7-6519 2 Out-of-Frame Inter-chr p12 Transcription factor q21.3 13903 ChimerSeq FusionScan TCGA_RNA-Seq FOXP1-PDZRN3 FOXP1 chr3 71026793 - PDZRN3 chr3 73453546 - Exonic hg19 STAD TCGA-D7-6519 2 In-Frame Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor p13 13904 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 STAD TCGA-D7-6519 2 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 13905 ChimerSeq FusionScan TCGA_RNA-Seq CALR-CDK2AP1 CALR chr19 13051468 + CDK2AP1 chr12 123751829 - Exonic hg19 STAD TCGA-IN-A6RJ 2 Out-of-Frame Inter-chr p13.13 q24.31 Tumor suppressor gene 13906 ChimerSeq FusionScan TCGA_RNA-Seq DNM2-DAND5 DNM2 chr19 10870487 + DAND5 chr19 13084202 + Exonic hg19 STAD TCGA-IN-A6RI 14 Out-of-Frame Intra-chr p13.2 p13.13 Seq+ 13907 ChimerSeq FusionScan TCGA_RNA-Seq NFIX-RFX1 NFIX chr19 13106678 + RFX1 chr19 14088898 - Exonic hg19 STAD TCGA-IN-A6RI 5 In-Frame Intra-chr p13.13 Transcription factor p13.12 Transcription factor Seq+ 13908 ChimerSeq FusionScan TCGA_RNA-Seq DNM2-NFIX DNM2 chr19 10870487 + NFIX chr19 13135834 + Exonic hg19 STAD TCGA-IN-A6RI 3 Out-of-Frame Intra-chr p13.2 p13.13 Transcription factor Seq+ 13909 ChimerSeq FusionScan TCGA_RNA-Seq JAG1-SLMO2 JAG1 chr20 10629708 - SLMO2 chr20 57611815 - Exonic hg19 STAD TCGA-IN-A6RI 2 In-Frame Intra-chr p12.2 13910 ChimerSeq FusionScan TCGA_RNA-Seq PCMTD2-EHMT1 PCMTD2 chr20 62887223 + EHMT1 chr9 140611077 + Exonic hg19 STAD TCGA-IN-A6RI 2 5'UTR-CDS Inter-chr q34.3 13911 ChimerSeq FusionScan TCGA_RNA-Seq FOXP4-PGC FOXP4 chr6 41545819 + PGC chr6 41710227 - Exonic hg19 STAD TCGA-IN-A6RI 2 In-Frame Intra-chr p21.1 Oncogene Transcription factor p21.1 13912 ChimerSeq FusionScan TCGA_RNA-Seq LRP8-YY1AP1 LRP8 chr1 53741302 - YY1AP1 chr1 155650247 - Exonic hg19 STAD TCGA-IN-A6RI 2 In-Frame Intra-chr p32.3 q22 13913 ChimerSeq FusionScan TCGA_RNA-Seq EIF2C2-TRAPPC9 EIF2C2 chr8 141551262 - TRAPPC9 chr8 140999044 - Exonic hg19 STAD TCGA-IN-A6RI 2 Out-of-Frame Intra-chr q24.3 13914 ChimerSeq FusionScan TCGA_RNA-Seq SCAF1-SNRNP70 SCAF1 chr19 50150087 + SNRNP70 chr19 49610881 + Exonic hg19 STAD TCGA-IN-A6RI 2 In-Frame Intra-chr q13.33 q13.33 13915 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D9B-SQSTM1 TBC1D9B chr5 179315102 - SQSTM1 chr5 179263435 + Exonic hg19 STAD TCGA-IN-A6RI 2 Out-of-Frame Intra-chr q35.3 13916 ChimerSeq FusionScan TCGA_RNA-Seq SDHAF2-CEP70 SDHAF2 chr11 61197654 + CEP70 chr3 138251412 - Exonic hg19 STAD TCGA-IN-A6RI 2 Out-of-Frame Inter-chr q12.2 q22.3 13917 ChimerSeq FusionScan TCGA_RNA-Seq DNM2-RFX1 DNM2 chr19 10870487 + RFX1 chr19 14088898 - Exonic hg19 STAD TCGA-IN-A6RI 2 Out-of-Frame Intra-chr p13.2 p13.12 Transcription factor Seq+ 13918 ChimerSeq FusionScan TCGA_RNA-Seq PFKP-GDI2 PFKP chr10 3109899 + GDI2 chr10 5842668 - Exonic hg19 STAD TCGA-HU-A4GN 2 Out-of-Frame Intra-chr p15.2 p15.1 Seq+ 13919 ChimerSeq FusionScan TCGA_RNA-Seq FAM221B-SLC44A2 FAM221B chr9 35819193 - SLC44A2 chr19 10738595 + Exonic hg19 STAD TCGA-HU-A4GN 2 In-Frame Inter-chr p13.3 p13.2 13920 ChimerSeq FusionScan TCGA_RNA-Seq TANC2-PTBP3 TANC2 chr17 61345234 + PTBP3 chr9 115092754 - Exonic hg19 STAD TCGA-HU-A4GN 2 Out-of-Frame Inter-chr q23.2 q32 13921 ChimerSeq FusionScan TCGA_RNA-Seq FAM114A1-BRD3 FAM114A1 chr4 38869455 + BRD3 chr9 136913576 - Exonic hg19 STAD TCGA-HU-A4GN 2 5'UTR-CDS Inter-chr p14 q34.2 Atypical:BRD Oncogene Seq+ 13922 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB1-ERH ZBTB1 chr14 64971664 + ERH chr14 69853800 - Exonic hg19 STAD TCGA-HU-A4GN 2 5'UTR-CDS Intra-chr q23.3 Transcription factor q24.1 13923 ChimerSeq FusionScan TCGA_RNA-Seq SH3GL1-UBE2I SH3GL1 chr19 4400320 - UBE2I chr16 1364020 + Exonic hg19 STAD TCGA-HU-A4GN 2 CDS-5'UTR Inter-chr p13.3 p13.3 13924 ChimerSeq FusionScan TCGA_RNA-Seq ZNF331-FAM192A ZNF331 chr19 54059162 + FAM192A chr16 57207781 - Exonic hg19 STAD TCGA-HU-A4GN 2 5'UTR-5'UTR Inter-chr q13.42 Transcription factor q13 Seq+ 13925 ChimerSeq FusionScan TCGA_RNA-Seq SPAG9-MMD SPAG9 chr17 49091592 - MMD chr17 53491593 - Exonic hg19 STAD TCGA-HU-A4GN 2 Out-of-Frame Intra-chr q21.33 q22 Seq+ 13926 ChimerSeq FusionScan TCGA_RNA-Seq APLF-ZCCHC7 APLF chr2 68694959 + ZCCHC7 chr9 37302184 + Exonic hg19 STAD TCGA-HU-A4GN 2 Out-of-Frame Inter-chr p13.3 p13.2 13927 ChimerSeq FusionScan TCGA_RNA-Seq CDKAL1-GMDS CDKAL1 chr6 21065459 + GMDS chr6 1961200 - Exonic hg19 STAD TCGA-HU-A4GN 2 In-Frame Intra-chr p22.3 p25.3 13928 ChimerSeq FusionScan TCGA_RNA-Seq SDK1-BAIAP2L1 SDK1 chr7 3341516 + BAIAP2L1 chr7 97949610 - Exonic hg19 STAD TCGA-VQ-A927 2 In-Frame Intra-chr p22.2 q22.1 13929 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R3B-LRCH1 PPP1R3B chr8 9008072 - LRCH1 chr13 47308055 + Exonic hg19 STAD TCGA-VQ-A927 2 5'UTR-CDS Inter-chr p23.1 q14.13 13930 ChimerSeq FusionScan TCGA_RNA-Seq PNKP-TOX PNKP chr19 50370725 - TOX chr8 59872567 - Exonic hg19 STAD TCGA-VQ-AA6K 2 5'UTR-CDS Inter-chr q13.33 q12.1 13931 ChimerSeq FusionScan TCGA_RNA-Seq TP53-FXR2 TP53 chr17 7579311 - FXR2 chr17 7509467 - Exonic hg19 STAD TCGA-BR-6801 3 In-Frame Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.1 KB Pub 13932 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC10-FASTKD1 DNAJC10 chr2 183581799 + FASTKD1 chr2 170401345 - Exonic hg19 STAD TCGA-IN-A7NT 3 5'UTR-CDS Intra-chr q32.1 q31.1 13933 ChimerSeq FusionScan TCGA_RNA-Seq EIF3M-FAM118A EIF3M chr11 32605475 + FAM118A chr22 45726483 + Exonic hg19 STAD TCGA-IN-A7NT 3 In-Frame Inter-chr p13 q13.31 13934 ChimerSeq FusionScan TCGA_RNA-Seq PWP2-C1orf53 PWP2 chr21 45528977 + C1orf53 chr1 197874925 + Exonic hg19 STAD TCGA-IN-A7NT 2 Out-of-Frame Inter-chr q22.3 q31.3 13935 ChimerSeq FusionScan TCGA_RNA-Seq DIP2C-CUL2 DIP2C chr10 735433 - CUL2 chr10 35360267 - Exonic hg19 STAD TCGA-IN-A7NT 2 Out-of-Frame Intra-chr p15.3 p11.21 Tumor suppressor gene 13936 ChimerSeq FusionScan TCGA_RNA-Seq CCNT1-HSPD1 CCNT1 chr12 49099550 - HSPD1 chr2 198353971 - Exonic hg19 STAD TCGA-IN-A7NT 2 In-Frame Inter-chr q13.12 q33.1 Tumor suppressor gene 13937 ChimerSeq FusionScan TCGA_RNA-Seq CELSR1-LINC00339 CELSR1 chr22 46829289 - LINC00339 chr1 22356772 + Exonic hg19 STAD TCGA-HU-A4GX 3 CDS-5'UTR Inter-chr q13.31 p36.12 13938 ChimerSeq FusionScan TCGA_RNA-Seq GALE-SEC61A1 GALE chr1 24124184 - SEC61A1 chr3 127785796 + Exonic hg19 STAD TCGA-HU-A4GX 3 In-Frame Inter-chr p36.11 q21.3 13939 ChimerSeq FusionScan TCGA_RNA-Seq HNF4A-MOCOS HNF4A chr20 43048516 + MOCOS chr18 33846711 + Exonic hg19 STAD TCGA-HU-A4GX 2 Out-of-Frame Inter-chr q13.12 Tumor suppressor gene Transcription factor q12.2 13940 ChimerSeq FusionScan TCGA_RNA-Seq CD47-CBLB CD47 chr3 107789939 - CBLB chr3 105378073 - Exonic hg19 STAD TCGA-HU-A4GX 2 In-Frame Intra-chr q13.12 q13.11 13941 ChimerSeq FusionScan TCGA_RNA-Seq AXIN1-SPEN AXIN1 chr16 402368 - SPEN chr1 16199310 + Exonic hg19 STAD TCGA-HU-A4GX 2 5'UTR-CDS Inter-chr p13.3 Oncogene Tumor suppressor gene p36.21 Transcription factor 13942 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0930-MYH9 KIAA0930 chr22 45636520 - MYH9 chr22 36745300 - Exonic hg19 STAD TCGA-HU-A4GX 2 CDS-5'UTR Intra-chr q13.31 q12.3 Oncogene Tumor suppressor gene 13943 ChimerSeq FusionScan TCGA_RNA-Seq WTIP-WDR62 WTIP chr19 34981382 + WDR62 chr19 36590300 + Exonic hg19 STAD TCGA-HU-A4GX 2 Out-of-Frame Intra-chr q13.11 q13.12 13944 ChimerSeq FusionScan TCGA_RNA-Seq AHCY-PIGU AHCY chr20 32881886 - PIGU chr20 33245048 - Exonic hg19 STAD TCGA-HU-A4GX 2 In-Frame Intra-chr q11.22 q11.22 13945 ChimerSeq FusionScan TCGA_RNA-Seq TNKS2-FAM107B TNKS2 chr10 93602148 + FAM107B chr10 14709690 - Exonic hg19 STAD TCGA-BR-6456 7 Out-of-Frame Intra-chr q23.32 p13 Seq+ 13946 ChimerSeq FusionScan TCGA_RNA-Seq KDM2A-SYNDIG1 KDM2A chr11 66999431 + SYNDIG1 chr20 24565491 + Exonic hg19 STAD TCGA-BR-6456 5 In-Frame Inter-chr q13.2 Transcription factor p11.21 Seq+ 13947 ChimerSeq FusionScan TCGA_RNA-Seq MTMR2-CLNS1A MTMR2 chr11 95647405 - CLNS1A chr11 77340944 - Exonic hg19 STAD TCGA-BR-6456 4 5'UTR-CDS Intra-chr q21 q14.1 Seq+ 13948 ChimerSeq FusionScan TCGA_RNA-Seq FAM53B-NUAK2 FAM53B chr10 126370175 - NUAK2 chr1 205277860 - Exonic hg19 STAD TCGA-BR-6456 4 Out-of-Frame Inter-chr q26.13 q32.1 Seq+ 13949 ChimerSeq FusionScan TCGA_RNA-Seq ASH1L-GON4L ASH1L chr1 155385534 - GON4L chr1 155796819 - Exonic hg19 STAD TCGA-BR-6456 2 Out-of-Frame Intra-chr q22 Transcription factor q22 Seq+ 13950 ChimerSeq FusionScan TCGA_RNA-Seq DANCR-PKM2 DANCR chr4 53579126 + PKM2 chr15 72492996 - Exonic hg19 STAD TCGA-BR-4257 2 5'UTR-CDS Inter-chr q12 13951 ChimerSeq FusionScan TCGA_RNA-Seq GNS-SARNP GNS chr12 65152864 - SARNP chr12 56154424 - Exonic hg19 STAD TCGA-BR-4257 2 In-Frame Intra-chr q14.3 q13.2 13952 ChimerSeq FusionScan TCGA_RNA-Seq TXNDC11-ABCC1 TXNDC11 chr16 11824500 - ABCC1 chr16 16101672 + Exonic hg19 STAD TCGA-BR-4257 2 In-Frame Intra-chr p13.13 13953 ChimerSeq FusionScan TCGA_RNA-Seq PRKCH-SMARCA2 PRKCH chr14 61789182 + SMARCA2 chr9 2115821 + Exonic hg19 STAD TCGA-BR-4257 2 In-Frame Inter-chr q23.1 p24.3 Tumor suppressor gene 13954 ChimerSeq FusionScan TCGA_RNA-Seq FERMT1-CHPF2 FERMT1 chr20 6103420 - CHPF2 chr7 150929584 + Exonic hg19 STAD TCGA-BR-8078 2 5'UTR-5'UTR Inter-chr p12.3 q36.1 Seq+ 13955 ChimerSeq FusionScan TCGA_RNA-Seq G6PD-SEPT9 G6PD chrX 153775003 - SEPT9 chr17 75483505 + Exonic hg19 STAD TCGA-BR-8078 2 In-Frame Inter-chr q28 Oncogene Seq+ 13956 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D5-FOXN3 TBC1D5 chr3 17549965 - FOXN3 chr14 89817152 - Exonic hg19 STAD TCGA-BR-8078 2 Out-of-Frame Inter-chr p24.3 q32.11 Transcription factor Seq+ 13957 ChimerSeq FusionScan TCGA_RNA-Seq C19orf21-RABEPK C19orf21 chr19 751171 + RABEPK chr9 127963058 + Exonic hg19 STAD TCGA-BR-8078 2 5'UTR-5'UTR Inter-chr q33.3 13958 ChimerSeq FusionScan TCGA_RNA-Seq CUL3-STK39 CUL3 chr2 225400244 - STK39 chr2 168986268 - Exonic hg19 STAD TCGA-BR-8078 2 Out-of-Frame Intra-chr q36.2 q24.3 13959 ChimerSeq FusionScan TCGA_RNA-Seq DANCR-MICAL1 DANCR chr4 53579126 + MICAL1 chr6 109767975 - Exonic hg19 STAD TCGA-BR-8078 2 5'UTR-CDS Inter-chr q12 q21 Seq+ 13960 ChimerSeq FusionScan TCGA_RNA-Seq GALNT10-PRDM2 GALNT10 chr5 153570585 + PRDM2 chr1 14099572 + Exonic hg19 STAD TCGA-BR-8078 2 Out-of-Frame Inter-chr q33.2 p36.21 Tumor suppressor gene Transcription factor Seq+ 13961 ChimerSeq FusionScan TCGA_RNA-Seq CCDC41-VAPA CCDC41 chr12 94853332 - VAPA chr18 9931806 + Exonic hg19 STAD TCGA-BR-8078 2 5'UTR-CDS Inter-chr p11.22 13962 ChimerSeq FusionScan TCGA_RNA-Seq MAP2K3-USP22 MAP2K3 chr17 21188281 + USP22 chr17 20931987 - Exonic hg19 STAD TCGA-BR-8078 2 Out-of-Frame Intra-chr p11.2 STE:STE7 p11.2 13963 ChimerSeq FusionScan TCGA_RNA-Seq TRA2A-TACC3 TRA2A chr7 23571407 - TACC3 chr4 1736999 + Exonic hg19 STAD TCGA-BR-8078 2 Out-of-Frame Inter-chr p15.3 p16.3 13964 ChimerSeq FusionScan TCGA_RNA-Seq GMDS-CNIH4 GMDS chr6 2124920 - CNIH4 chr1 224553580 + Exonic hg19 STAD TCGA-BR-8078 2 In-Frame Inter-chr p25.3 q42.11 Seq+ 13965 ChimerSeq FusionScan TCGA_RNA-Seq MTF2-DDAH1 MTF2 chr1 93545088 + DDAH1 chr1 85790566 - Exonic hg19 STAD TCGA-BR-8078 2 Out-of-Frame Intra-chr p22.1 Transcription factor p22.3 Seq+ 13966 ChimerSeq FusionScan TCGA_RNA-Seq RNF115-MST4 RNF115 chr1 145611341 + MST4 chrX 131197460 + Exonic hg19 STAD TCGA-BR-8078 2 In-Frame Inter-chr q21.1 STE:STE20 13967 ChimerSeq FusionScan TCGA_RNA-Seq GNB2-SNHG12 GNB2 chr7 100274422 + SNHG12 chr1 28906493 - Exonic hg19 STAD TCGA-BR-8078 2 CDS-3'UTR Inter-chr q22.1 p35.3 Seq+ 13968 ChimerSeq FusionScan TCGA_RNA-Seq NEDD9-GALK2 NEDD9 chr6 11306224 - GALK2 chr15 49611800 + Exonic hg19 STAD TCGA-BR-8078 2 Out-of-Frame Inter-chr p24.2 q21.1 13969 ChimerSeq FusionScan TCGA_RNA-Seq TMX2-CTNND1 TMX2 chr11 57505140 + CTNND1 chr11 57561481 + Exonic hg19 STAD TCGA-BR-8078 2 Out-of-Frame Intra-chr q12.1 q12.1 Tumor suppressor gene 13970 ChimerSeq FusionScan TCGA_RNA-Seq EPS15-NRD1 EPS15 chr1 51984870 - NRD1 chr1 52306186 - Exonic hg19 STAD TCGA-BR-A4IU 2 Out-of-Frame Intra-chr p32.3 13971 ChimerSeq FusionScan TCGA_RNA-Seq CNOT4-PRMT2 CNOT4 chr7 135194636 - PRMT2 chr21 48063446 + Exonic hg19 STAD TCGA-BR-A4IU 2 5'UTR-CDS Inter-chr q33 q22.3 13972 ChimerSeq FusionScan TCGA_RNA-Seq MED12L-GMPS MED12L chr3 151134210 + GMPS chr3 155611306 + Exonic hg19 STAD TCGA-BR-A4IU 2 In-Frame Intra-chr q25.1 q25.31 13973 ChimerSeq FusionScan TCGA_RNA-Seq TMEM8A-CACNA1H TMEM8A chr16 431700 - CACNA1H chr16 1248614 + Exonic hg19 STAD TCGA-BR-A4IU 2 In-Frame Intra-chr p13.3 p13.3 13974 ChimerSeq FusionScan TCGA_RNA-Seq ZFAND3-SHFM1 ZFAND3 chr6 38029551 + SHFM1 chr7 96318278 - Exonic hg19 STAD TCGA-HU-A4GC 2 Out-of-Frame Inter-chr p21.2 13975 ChimerSeq FusionScan TCGA_RNA-Seq EIF3H-UBB EIF3H chr8 117738254 - UBB chr17 16285215 + Exonic hg19 STAD TCGA-HU-A4GC 2 CDS-5'UTR Inter-chr q24.11 p11.2 13976 ChimerSeq FusionScan TCGA_RNA-Seq C8orf59-SERINC2 C8orf59 chr8 86132534 - SERINC2 chr1 31905813 + Exonic hg19 STAD TCGA-HU-A4GC 2 5'UTR-CDS Inter-chr q21.2 p35.2 13977 ChimerSeq FusionScan TCGA_RNA-Seq GBE1-MKI67 GBE1 chr3 81810525 - MKI67 chr10 129917583 - Exonic hg19 STAD TCGA-HU-A4GC 2 In-Frame Inter-chr p12.2 q26.2 13978 ChimerSeq FusionScan TCGA_RNA-Seq ZNF850-FAM182A ZNF850 chr19 37263626 - FAM182A chr20 26049552 + Exonic hg19 STAD TCGA-D7-A4YV 2 5'UTR-5'UTR Inter-chr q13.12 Transcription factor p11.1 13979 ChimerSeq FusionScan TCGA_RNA-Seq FKBP5-ATP2C1 FKBP5 chr6 35604790 - ATP2C1 chr3 130734995 + Exonic hg19 STAD TCGA-D7-A4YV 2 In-Frame Inter-chr p21.31 q22.1 13980 ChimerSeq FusionScan TCGA_RNA-Seq ACTR5-IPO13 ACTR5 chr20 37383817 + IPO13 chr1 44423073 + Exonic hg19 STAD TCGA-D7-A4YV 2 In-Frame Inter-chr q11.23 p34.1 13981 ChimerSeq FusionScan TCGA_RNA-Seq LIN9-EZR LIN9 chr1 226485419 - EZR chr6 159210403 - Exonic hg19 STAD TCGA-D7-A4YV 2 In-Frame Inter-chr q42.12 Tumor suppressor gene q25.3 13982 ChimerSeq FusionScan TCGA_RNA-Seq ZNF589-FBXW12 ZNF589 chr3 48302429 + FBXW12 chr3 48414797 + Exonic hg19 STAD TCGA-D7-A4YV 2 Out-of-Frame Intra-chr p21.31 Transcription factor p21.31 Seq+ 13983 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC7-BNC2 ZCCHC7 chr9 37120620 + BNC2 chr9 16738483 - Exonic hg19 STAD TCGA-D7-A4YV 2 5'UTR-CDS Intra-chr p13.2 p22.2 Transcription factor 13984 ChimerSeq FusionScan TCGA_RNA-Seq YEATS2-RHBDD1 YEATS2 chr3 183415781 + RHBDD1 chr2 227771508 + Exonic hg19 STAD TCGA-D7-A4YV 2 5'UTR-CDS Inter-chr q27.1 q36.3 13985 ChimerSeq FusionScan TCGA_RNA-Seq TNKS-CCDC109B TNKS chr8 9437893 + CCDC109B chr4 110603737 + Exonic hg19 STAD TCGA-D7-A4YV 2 In-Frame Inter-chr p23.1 13986 ChimerSeq FusionScan TCGA_RNA-Seq STX8-GDI2 STX8 chr17 9395145 - GDI2 chr10 5842668 - Exonic hg19 STAD TCGA-BR-8367 2 Out-of-Frame Inter-chr p13.1 p15.1 13987 ChimerSeq FusionScan TCGA_RNA-Seq CPD-GRAP2 CPD chr17 28712254 + GRAP2 chr22 40351822 + Exonic hg19 STAD TCGA-CD-A4MI 3 Out-of-Frame Inter-chr q11.2 Tumor suppressor gene q13.1 13988 ChimerSeq FusionScan TCGA_RNA-Seq FAM107B-ASH1L FAM107B chr10 14572330 - ASH1L chr1 155385714 - Exonic hg19 STAD TCGA-CD-A4MI 2 In-Frame Inter-chr p13 q22 Transcription factor 13989 ChimerSeq FusionScan TCGA_RNA-Seq DPYD-TNIK DPYD chr1 98144650 - TNIK chr3 170885059 - Exonic hg19 STAD TCGA-CD-A4MI 2 Out-of-Frame Inter-chr p21.3 Oncogene q26.31 STE:STE20 13990 ChimerSeq FusionScan TCGA_RNA-Seq SCAF4-RUNX2 SCAF4 chr21 33057361 - RUNX2 chr6 45459677 + Exonic hg19 STAD TCGA-CD-A4MI 2 In-Frame Inter-chr q22.11 p21.1 Tumor suppressor gene Transcription factor 13991 ChimerSeq FusionScan TCGA_RNA-Seq RALGAPA2-RPS16 RALGAPA2 chr20 20505049 - RPS16 chr19 39924401 - Exonic hg19 STAD TCGA-CD-A4MI 2 CDS-3'UTR Inter-chr p11.23 q13.2 13992 ChimerSeq FusionScan TCGA_RNA-Seq ZFX-PDK3 ZFX chrX 24197887 + PDK3 chrX 24557250 + Exonic hg19 STAD TCGA-CD-A4MI 2 Out-of-Frame Intra-chr p22.11 Transcription factor p22.11 13993 ChimerSeq FusionScan TCGA_RNA-Seq CES3-ATP5C1 CES3 chr16 66995292 + ATP5C1 chr10 7844232 + Exonic hg19 STAD TCGA-CD-A4MI 2 In-Frame Inter-chr q22.1 p14 13994 ChimerSeq FusionScan TCGA_RNA-Seq DYRK2-SEC31A DYRK2 chr12 68043725 + SEC31A chr4 83750211 - Exonic hg19 STAD TCGA-CD-A4MI 2 Out-of-Frame Inter-chr q15 CMGC:DYRK q21.22 13995 ChimerSeq FusionScan TCGA_RNA-Seq ALCAM-PARN ALCAM chr3 105086325 + PARN chr16 14576684 - Exonic hg19 STAD TCGA-CD-A4MI 2 In-Frame Inter-chr q13.11 13996 ChimerSeq FusionScan TCGA_RNA-Seq FMO3-VGLL4 FMO3 chr1 171061931 + VGLL4 chr3 11606493 - Exonic hg19 STAD TCGA-CD-A4MI 2 Out-of-Frame Inter-chr q24.3 p25.2 13997 ChimerSeq FusionScan TCGA_RNA-Seq KIF13A-OVOL2 KIF13A chr6 17817250 - OVOL2 chr20 18005596 - Exonic hg19 STAD TCGA-BR-7958 2 Out-of-Frame Inter-chr p22.3 p11.23 Transcription factor 13998 ChimerSeq FusionScan TCGA_RNA-Seq CDH3-SYNGR2 CDH3 chr16 68679653 + SYNGR2 chr17 76167819 + Exonic hg19 STAD TCGA-BR-7958 2 Out-of-Frame Inter-chr q22.1 q25.3 13999 ChimerSeq FusionScan TCGA_RNA-Seq AP3D1-OSBPL1A AP3D1 chr19 2138617 - OSBPL1A chr18 21946930 - Exonic hg19 STAD TCGA-BR-7958 2 In-Frame Inter-chr p13.3 q11.2 14000 ChimerSeq FusionScan TCGA_RNA-Seq ING3-CHMP1A ING3 chr7 120595678 + CHMP1A chr16 89713739 - Exonic hg19 STAD TCGA-BR-7958 2 In-Frame Inter-chr q31.31 Tumor suppressor gene q24.3 14001 ChimerSeq FusionScan TCGA_RNA-Seq EIF1AD-NECAP2 EIF1AD chr11 65769510 - NECAP2 chr1 16778332 + Exonic hg19 STAD TCGA-BR-7958 2 5'UTR-CDS Inter-chr q13.1 p36.13 14002 ChimerSeq FusionScan TCGA_RNA-Seq STAT1-ATP1A1 STAT1 chr2 191878250 - ATP1A1 chr1 116933403 + Exonic hg19 STAD TCGA-BR-7958 2 5'UTR-CDS Inter-chr q32.2 Tumor suppressor gene Transcription factor p13.1 14003 ChimerSeq FusionScan TCGA_RNA-Seq SNHG1-DDX39B SNHG1 chr11 62622895 - DDX39B chr6 31503262 - Exonic hg19 STAD TCGA-BR-7958 2 3'UTR-5'UTR Inter-chr q12.3 14004 ChimerSeq FusionScan TCGA_RNA-Seq BAIAP2L1-LLGL2 BAIAP2L1 chr7 98030113 - LLGL2 chr17 73564556 + Exonic hg19 STAD TCGA-BR-7958 2 Out-of-Frame Inter-chr q22.1 q25.1 14005 ChimerSeq FusionScan TCGA_RNA-Seq AIMP1-SQSTM1 AIMP1 chr4 107237751 + SQSTM1 chr5 179263435 + Exonic hg19 STAD TCGA-BR-7958 2 Out-of-Frame Inter-chr q24 Tumor suppressor gene q35.3 14006 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPM-PLEKHA6 HNRNPM chr19 8530246 + PLEKHA6 chr1 204199714 - Exonic hg19 STAD TCGA-BR-7958 2 In-Frame Inter-chr p13.2 q32.1 14007 ChimerSeq FusionScan TCGA_RNA-Seq ZYG11B-JAK1 ZYG11B chr1 53192355 + JAK1 chr1 65307284 - Exonic hg19 STAD TCGA-BR-7958 2 In-Frame Intra-chr p32.3 p31.3 TK:JakA Oncogene 14008 ChimerSeq FusionScan TCGA_RNA-Seq TM9SF3-PDLIM1 TM9SF3 chr10 98303832 - PDLIM1 chr10 96998442 - Exonic hg19 STAD TCGA-BR-7958 2 Out-of-Frame Intra-chr q24.1 q23.33 14009 ChimerSeq FusionScan TCGA_RNA-Seq EDEM1-GLS EDEM1 chr3 5246926 + GLS chr2 191745546 + Exonic hg19 STAD TCGA-BR-7958 2 CDS-5'UTR Inter-chr p26.1 q32.2 Tumor suppressor gene 14010 ChimerSeq FusionScan TCGA_RNA-Seq ATL2-ACER3 ATL2 chr2 38540292 - ACER3 chr11 76637600 + Exonic hg19 STAD TCGA-BR-7958 2 Out-of-Frame Inter-chr p22.1 q13.5 14011 ChimerSeq FusionScan TCGA_RNA-Seq ZNF227-AKAP9 ZNF227 chr19 44722005 + AKAP9 chr7 91671981 + Exonic hg19 STAD TCGA-BR-A4PD 3 In-Frame Inter-chr q13.31 Transcription factor q21.2 Oncogene Seq+ 14012 ChimerSeq FusionScan TCGA_RNA-Seq CNBP-SMARCB1 CNBP chr3 128902618 - SMARCB1 chr22 24175758 + Exonic hg19 STAD TCGA-BR-A4PD 2 5'UTR-CDS Inter-chr q21.3 q11.23 Oncogene Tumor suppressor gene Seq+ 14013 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-PSMB1 PTPN12 chr7 77166962 + PSMB1 chr6 170858201 - Exonic hg19 STAD TCGA-CD-A4MG 2 Out-of-Frame Inter-chr q11.23 Tumor suppressor gene 14014 ChimerSeq FusionScan TCGA_RNA-Seq RPS13-COBLL1 RPS13 chr11 17098714 - COBLL1 chr2 165542542 - Exonic hg19 STAD TCGA-CD-A4MG 2 3'UTR-CDS Inter-chr p15.1 q24.3 14015 ChimerSeq FusionScan TCGA_RNA-Seq EIF4G3-HP1BP3 EIF4G3 chr1 21415630 - HP1BP3 chr1 21083749 - Exonic hg19 STAD TCGA-CD-8525 4 5'UTR-CDS Intra-chr p36.12 p36.12 Seq+ 14016 ChimerSeq FusionScan TCGA_RNA-Seq FAM60A-MADCAM1 FAM60A chr12 31478957 - MADCAM1 chr19 501668 + Exonic hg19 STAD TCGA-CD-8525 4 5'UTR-CDS Inter-chr p13.3 Seq+ 14017 ChimerSeq FusionScan TCGA_RNA-Seq ZNF592-UBE2L3 ZNF592 chr15 85343208 + UBE2L3 chr22 21965145 + Exonic hg19 STAD TCGA-CD-8525 2 In-Frame Inter-chr q25.3 Transcription factor q11.21 14018 ChimerSeq FusionScan TCGA_RNA-Seq NCOR2-CDK2AP1 NCOR2 chr12 125020110 - CDK2AP1 chr12 123751829 - Exonic hg19 STAD TCGA-CD-8525 2 5'UTR-CDS Intra-chr q24.31 q24.31 Tumor suppressor gene 14019 ChimerSeq FusionScan TCGA_RNA-Seq SH3D19-FUS SH3D19 chr4 152095821 - FUS chr16 31199645 + Exonic hg19 STAD TCGA-CD-8525 2 In-Frame Inter-chr q31.3 p11.2 Tumor suppressor gene Seq+ 14020 ChimerSeq FusionScan TCGA_RNA-Seq GPRC5A-NRG1 GPRC5A chr12 13044598 + NRG1 chr8 32453345 + Exonic hg19 STAD TCGA-B7-A5TN 12 5'UTR-CDS Inter-chr p13.1 Tumor suppressor gene p12 Seq+ 14021 ChimerSeq FusionScan TCGA_RNA-Seq SESN1-PPIL6 SESN1 chr6 109414997 - PPIL6 chr6 109714140 - Exonic hg19 STAD TCGA-B7-A5TN 3 Out-of-Frame Intra-chr q21 q21 Seq+ 14022 ChimerSeq FusionScan TCGA_RNA-Seq MKL1-SLC25A17 MKL1 chr22 40948109 - SLC25A17 chr22 41175129 - Exonic hg19 STAD TCGA-B7-A5TN 3 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 14023 ChimerSeq FusionScan TCGA_RNA-Seq NOTCH2NL-PAN3 NOTCH2NL chr1 145281704 + PAN3 chr13 28830428 + Exonic hg19 STAD TCGA-B7-A5TN 2 In-Frame Inter-chr q21.1 q12.2 14024 ChimerSeq FusionScan TCGA_RNA-Seq HUWE1-WNK1 HUWE1 chrX 53619357 - WNK1 chr12 992560 + Exonic hg19 STAD TCGA-B7-A5TN 2 In-Frame Inter-chr p11.22 p13.33 14025 ChimerSeq FusionScan TCGA_RNA-Seq LRIG3-CD47 LRIG3 chr12 59280591 - CD47 chr3 107766139 - Exonic hg19 STAD TCGA-B7-A5TN 2 Out-of-Frame Inter-chr q14.1 Tumor suppressor gene q13.12 14026 ChimerSeq FusionScan TCGA_RNA-Seq BPIFB1-BCAR4 BPIFB1 chr20 31873994 + BCAR4 chr16 11922248 - Exonic hg19 STAD TCGA-HU-A4H2 23 CDS-3'UTR Inter-chr q11.21 p13.13 14027 ChimerSeq FusionScan TCGA_RNA-Seq BPIFB1-BCAR4 BPIFB1 chr20 31873994 + BCAR4 chr16 11914154 - Exonic hg19 STAD TCGA-HU-A4H2 12 CDS-3'UTR Inter-chr q11.21 p13.13 14028 ChimerSeq FusionScan TCGA_RNA-Seq SLC25A25-WDR34 SLC25A25 chr9 130864760 + WDR34 chr9 131403218 - Exonic hg19 STAD TCGA-HU-A4H2 10 In-Frame Intra-chr q34.11 q34.11 14029 ChimerSeq FusionScan TCGA_RNA-Seq FDFT1-CASK FDFT1 chr8 11679387 + CASK chrX 41530783 - Exonic hg19 STAD TCGA-HU-A4H2 10 In-Frame Inter-chr p23.1 p11.4 CAMK:CASK 14030 ChimerSeq FusionScan TCGA_RNA-Seq STRN4-UBE2S STRN4 chr19 47233988 - UBE2S chr19 55918330 - Exonic hg19 STAD TCGA-HU-A4H2 10 In-Frame Intra-chr q13.32 q13.42 Seq+ 14031 ChimerSeq FusionScan TCGA_RNA-Seq BRD3-LCN2 BRD3 chr9 136917427 - LCN2 chr9 130912516 + Exonic hg19 STAD TCGA-HU-A4H2 7 In-Frame Intra-chr q34.2 Atypical:BRD Oncogene q34.11 14032 ChimerSeq FusionScan TCGA_RNA-Seq BPIFB1-BCAR4 BPIFB1 chr20 31873994 + BCAR4 chr16 11915612 - Exonic hg19 STAD TCGA-HU-A4H2 7 CDS-3'UTR Inter-chr q11.21 p13.13 14033 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD11-SLC7A1 ANKRD11 chr16 89556652 - SLC7A1 chr13 30110339 - Exonic hg19 STAD TCGA-HU-A4H2 7 5'UTR-5'UTR Inter-chr q24.3 q12.3 14034 ChimerSeq FusionScan TCGA_RNA-Seq RELB-ZSCAN18 RELB chr19 45504943 + ZSCAN18 chr19 58600204 - Exonic hg19 STAD TCGA-HU-A4H2 6 In-Frame Intra-chr q13.32 Transcription factor q13.43 Transcription factor 14035 ChimerSeq FusionScan TCGA_RNA-Seq TRA2B-DGKG TRA2B chr3 185655612 - DGKG chr3 186038496 - Exonic hg19 STAD TCGA-HU-A4H2 5 5'UTR-5'UTR Intra-chr q27.2 q27.3 14036 ChimerSeq FusionScan TCGA_RNA-Seq UBAC1-NFX1 UBAC1 chr9 138852870 - NFX1 chr9 33364007 + Exonic hg19 STAD TCGA-HU-A4H2 5 Out-of-Frame Intra-chr q34.3 p13.3 Transcription factor 14037 ChimerSeq FusionScan TCGA_RNA-Seq CDC14B-SUSD1 CDC14B chr9 99381500 - SUSD1 chr9 114919893 - Exonic hg19 STAD TCGA-HU-A4H2 4 In-Frame Intra-chr q22.33 q32 14038 ChimerSeq FusionScan TCGA_RNA-Seq EIF2C2-TRAPPC9 EIF2C2 chr8 141645583 - TRAPPC9 chr8 141034176 - Exonic hg19 STAD TCGA-HU-A4H2 3 Out-of-Frame Intra-chr q24.3 14039 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-RSBN1L PTPN12 chr7 77230123 + RSBN1L chr7 77365726 + Exonic hg19 STAD TCGA-HU-A4H2 3 Out-of-Frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 14040 ChimerSeq FusionScan TCGA_RNA-Seq SEPT9-RAC1 SEPT9 chr17 75277636 + RAC1 chr7 6439756 + Exonic hg19 STAD TCGA-HU-A4H2 2 Out-of-Frame Inter-chr p22.1 Oncogene 14041 ChimerSeq FusionScan TCGA_RNA-Seq BPIFB1-BCAR4 BPIFB1 chr20 31871060 + BCAR4 chr16 11914154 - Exonic hg19 STAD TCGA-HU-A4H2 2 5'UTR-3'UTR Inter-chr q11.21 p13.13 14042 ChimerSeq FusionScan TCGA_RNA-Seq SETX-FAM78A SETX chr9 135201710 - FAM78A chr9 134136737 - Exonic hg19 STAD TCGA-HU-A4H2 2 Out-of-Frame Intra-chr q34.13 q34.13 14043 ChimerSeq FusionScan TCGA_RNA-Seq EML4-RTN4 EML4 chr2 42396776 + RTN4 chr2 55214834 - Exonic hg19 STAD TCGA-HU-A4H2 2 In-Frame Intra-chr p21 Oncogene p16.1 Tumor suppressor gene 14044 ChimerSeq FusionScan TCGA_RNA-Seq GNB1-SLC35E2B GNB1 chr1 1822258 - SLC35E2B chr1 1603068 - Exonic hg19 STAD TCGA-HU-A4H2 2 5'UTR-CDS Intra-chr p36.33 p36.33 14045 ChimerSeq FusionScan TCGA_RNA-Seq SUSD1-ODF2 SUSD1 chr9 114886536 - ODF2 chr9 131235191 + Exonic hg19 STAD TCGA-HU-A4H2 2 Out-of-Frame Intra-chr q32 q34.11 14046 ChimerSeq FusionScan TCGA_RNA-Seq THADA-NBAS THADA chr2 43712372 - NBAS chr2 15523441 - Exonic hg19 STAD TCGA-HU-A4H2 2 In-Frame Intra-chr p21 p24.3 14047 ChimerSeq FusionScan TCGA_RNA-Seq HSP90B1-ACTN4 HSP90B1 chr12 104331584 + ACTN4 chr19 39219913 + Exonic hg19 STAD TCGA-HU-A4H2 2 In-Frame Inter-chr q23.3 Tumor suppressor gene 14048 ChimerSeq FusionScan TCGA_RNA-Seq PICALM-NFATC2 PICALM chr11 85779692 - NFATC2 chr20 50092197 - Exonic hg19 STAD TCGA-HU-A4H2 2 Out-of-Frame Inter-chr q14.2 q13.2 Tumor suppressor gene Transcription factor 14049 ChimerSeq FusionScan TCGA_RNA-Seq APPL1-KIAA1967 APPL1 chr3 57301820 + KIAA1967 chr8 22476662 + Exonic hg19 STAD TCGA-HU-A4H2 2 Out-of-Frame Inter-chr p14.3 Tumor suppressor gene 14050 ChimerSeq FusionScan TCGA_RNA-Seq NELF-ZCCHC6 NELF chr9 140344050 - ZCCHC6 chr9 88920154 - Exonic hg19 STAD TCGA-HU-A4H2 2 In-Frame Intra-chr q21.33 14051 ChimerSeq FusionScan TCGA_RNA-Seq ACP1-SH3YL1 ACP1 chr2 272150 + SH3YL1 chr2 230044 - Exonic hg19 STAD TCGA-HU-A4H2 2 In-Frame Intra-chr p25.3 p25.3 14052 ChimerSeq FusionScan TCGA_RNA-Seq ERP44-NOTCH1 ERP44 chr9 102861065 - NOTCH1 chr9 139400333 - Exonic hg19 STAD TCGA-HU-A4H2 2 In-Frame Intra-chr q31.1 q34.3 Oncogene Tumor suppressor gene 14053 ChimerSeq FusionScan TCGA_RNA-Seq TMEM245-ZNF484 TMEM245 chr9 111881614 - ZNF484 chr9 95618600 - Exonic hg19 STAD TCGA-HU-A4H2 2 In-Frame Intra-chr q31.3 q22.31 Transcription factor 14054 ChimerSeq FusionScan TCGA_RNA-Seq PIP5K1B-MELK PIP5K1B chr9 71320678 + MELK chr9 36589532 + Exonic hg19 STAD TCGA-HU-A4H2 2 5'UTR-5'UTR Intra-chr q21.11 p13.2 CAMK:CAMKL 14055 ChimerSeq FusionScan TCGA_RNA-Seq FRYL-SLAIN2 FRYL chr4 48782094 - SLAIN2 chr4 48371865 + Exonic hg19 STAD TCGA-HU-A4H2 2 5'UTR-CDS Intra-chr p11 p11 Seq+ 14056 ChimerSeq FusionScan TCGA_RNA-Seq PRSS3-UBE2R2 PRSS3 chr9 33750725 + UBE2R2 chr9 33886878 + Exonic hg19 STAD TCGA-BR-8366 3 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 14057 ChimerSeq FusionScan TCGA_RNA-Seq CCT7-MRPS9 CCT7 chr2 73461512 + MRPS9 chr2 105687770 + Exonic hg19 STAD TCGA-BR-8366 2 In-Frame Intra-chr p13.2 q12.1 14058 ChimerSeq FusionScan TCGA_RNA-Seq C4orf34-HP1BP3 C4orf34 chr4 39606690 - HP1BP3 chr1 21100103 - Exonic hg19 STAD TCGA-BR-8366 2 Out-of-Frame Inter-chr p36.12 14059 ChimerSeq FusionScan TCGA_RNA-Seq MEF2A-SNX27 MEF2A chr15 100173378 + SNX27 chr1 151630710 + Exonic hg19 STAD TCGA-BR-8366 2 In-Frame Inter-chr q26.3 Transcription factor q21.3 Seq+ 14060 ChimerSeq FusionScan TCGA_RNA-Seq AAK1-HIATL1 AAK1 chr2 69870009 - HIATL1 chr9 97177439 + Exonic hg19 STAD TCGA-BR-8366 2 Out-of-Frame Inter-chr p13.3 Other:NAK 14061 ChimerSeq FusionScan TCGA_RNA-Seq MAP4K4-TXNL4A MAP4K4 chr2 102407238 + TXNL4A chr18 77737701 - Exonic hg19 STAD TCGA-BR-8366 2 In-Frame Inter-chr q11.2 q23 14062 ChimerSeq FusionScan TCGA_RNA-Seq ETS1-CBL ETS1 chr11 128354717 - CBL chr11 119142444 + Exonic hg19 STAD TCGA-BR-8366 2 Out-of-Frame Intra-chr q24.3 Oncogene Transcription factor q23.3 Oncogene Tumor suppressor gene 14063 ChimerSeq FusionScan TCGA_RNA-Seq RNF10-CIT RNF10 chr12 121009094 + CIT chr12 120295502 - Exonic hg19 STAD TCGA-BR-8683 2 Out-of-Frame Intra-chr q24.31 q24.23 14064 ChimerSeq FusionScan TCGA_RNA-Seq NAA50-PLSCR1 NAA50 chr3 113464788 - PLSCR1 chr3 146254352 - Exonic hg19 STAD TCGA-BR-8683 2 CDS-5'UTR Intra-chr q13.31 q24 Transcription factor 14065 ChimerSeq FusionScan TCGA_RNA-Seq DOCK5-CDCA2 DOCK5 chr8 25101273 + CDCA2 chr8 25317755 + Exonic hg19 STAD TCGA-BR-8683 2 CDS-5'UTR Intra-chr p21.2 p21.2 Seq+ 14066 ChimerSeq FusionScan TCGA_RNA-Seq DIS3L2-EFHD1 DIS3L2 chr2 233075115 + EFHD1 chr2 233546294 + Exonic hg19 STAD TCGA-D7-A4YU 6 Out-of-Frame Intra-chr q37.1 q37.1 Seq+ 14067 ChimerSeq FusionScan TCGA_RNA-Seq BIRC6-TTC27 BIRC6 chr2 32768608 + TTC27 chr2 32891701 + Exonic hg19 STAD TCGA-D7-A4YU 4 In-Frame Intra-chr p22.3 p22.3 Seq+ 14068 ChimerSeq FusionScan TCGA_RNA-Seq NBAS-UHRF2 NBAS chr2 15514731 - UHRF2 chr9 6493825 + Exonic hg19 STAD TCGA-D7-A4YU 2 Out-of-Frame Inter-chr p24.3 p24.1 Tumor suppressor gene 14069 ChimerSeq FusionScan TCGA_RNA-Seq FBXO25-ATG4B FBXO25 chr8 363213 + ATG4B chr2 242606059 + Exonic hg19 STAD TCGA-D7-A4YU 2 Out-of-Frame Inter-chr p23.3 Tumor suppressor gene q37.3 14070 ChimerSeq FusionScan TCGA_RNA-Seq ARL8B-MSN ARL8B chr3 5164273 + MSN chrX 64947675 + Exonic hg19 STAD TCGA-D7-A4YU 2 In-Frame Inter-chr p26.1 q12 14071 ChimerSeq FusionScan TCGA_RNA-Seq TAF3-HERC4 TAF3 chr10 7866523 + HERC4 chr10 69773943 - Exonic hg19 STAD TCGA-D7-A4YU 2 Out-of-Frame Intra-chr p14 q21.3 14072 ChimerSeq FusionScan TCGA_RNA-Seq RERG-EPS8 RERG chr12 15370362 - EPS8 chr12 15835906 - Exonic hg19 STAD TCGA-D7-A4YU 2 CDS-5'UTR Intra-chr p12.3 p12.3 14073 ChimerSeq FusionScan TCGA_RNA-Seq SEMA3B-ALS2CR12 SEMA3B chr3 50308911 + ALS2CR12 chr2 202154508 - Exonic hg19 STAD TCGA-D7-A4YU 2 In-Frame Inter-chr p21.31 Tumor suppressor gene q33.1 Seq+ 14074 ChimerSeq FusionScan TCGA_RNA-Seq WIPF1-OLA1 WIPF1 chr2 175499245 - OLA1 chr2 175006728 - Exonic hg19 STAD TCGA-D7-A4YU 2 5'UTR-5'UTR Intra-chr q31.1 q31.1 14075 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R12C-KLHDC4 PPP1R12C chr19 55610151 - KLHDC4 chr16 87748179 - Exonic hg19 STAD TCGA-D7-A4YU 2 In-Frame Inter-chr q13.42 q24.2 14076 ChimerSeq FusionScan TCGA_RNA-Seq KRT86-ADARB1 KRT86 chr12 52699188 + ADARB1 chr21 46591524 + Exonic hg19 STAD TCGA-D7-A4YU 2 CDS-5'UTR Inter-chr q13.13 q22.3 Tumor suppressor gene Seq+ 14077 ChimerSeq FusionScan TCGA_RNA-Seq FAM49B-PVT1 FAM49B chr8 130951853 - PVT1 chr8 129082405 + Exonic hg19 STAD TCGA-D7-A4YU 2 5'UTR-5'UTR Intra-chr q24.21 q24.21 14078 ChimerSeq FusionScan TCGA_RNA-Seq YTHDF1-STAG2 YTHDF1 chr20 61845215 - STAG2 chrX 123156380 + Exonic hg19 STAD TCGA-D7-A4YU 2 CDS-5'UTR Inter-chr q13.33 q25 Oncogene 14079 ChimerSeq FusionScan TCGA_RNA-Seq WSB2-RFC5 WSB2 chr12 118490114 - RFC5 chr12 118456876 + Exonic hg19 STAD TCGA-D7-6525 29 In-Frame Intra-chr q24.23 q24.23 Seq+ 14080 ChimerSeq FusionScan TCGA_RNA-Seq ZFPM2-RRAS2 ZFPM2 chr8 106573709 + RRAS2 chr11 14317401 - Exonic hg19 STAD TCGA-D7-6525 2 In-Frame Inter-chr q22.3 Transcription factor p15.2 14081 ChimerSeq FusionScan TCGA_RNA-Seq PPP4R1L-PMEPA1 PPP4R1L chr20 56884281 - PMEPA1 chr20 56228142 - Exonic hg19 STAD TCGA-D7-6525 2 3'UTR-CDS Intra-chr q13.32 q13.31 14082 ChimerSeq FusionScan TCGA_RNA-Seq RNF146-HIBADH RNF146 chr6 127601485 + HIBADH chr7 27565991 - Exonic hg19 STAD TCGA-D7-6525 2 Out-of-Frame Inter-chr q22.33 p15.2 14083 ChimerSeq FusionScan TCGA_RNA-Seq ASPH-KCTD20 ASPH chr8 62593526 - KCTD20 chr6 36452490 + Exonic hg19 STAD TCGA-D7-6525 2 In-Frame Inter-chr q12.3 p21.31 14084 ChimerSeq FusionScan TCGA_RNA-Seq EYA3-NPNT EYA3 chr1 28354299 - NPNT chr4 106848492 + Exonic hg19 STAD TCGA-D7-6525 2 In-Frame Inter-chr p35.3 q24 14085 ChimerSeq FusionScan TCGA_RNA-Seq SETD8-NOC4L SETD8 chr12 123868755 + NOC4L chr12 132635525 + Exonic hg19 STAD TCGA-D7-6525 2 In-Frame Intra-chr q24.33 14086 ChimerSeq FusionScan TCGA_RNA-Seq BACE2-FAM3B BACE2 chr21 42629253 + FAM3B chr21 42710304 + Exonic hg19 STAD TCGA-VQ-A91V 2 In-Frame Intra-chr q22.2 q22.3 Seq+ 14087 ChimerSeq FusionScan TCGA_RNA-Seq CLNS1A-NDUFC2 CLNS1A chr11 77333544 - NDUFC2 chr11 77784187 - Exonic hg19 STAD TCGA-RD-A8N4 9 In-Frame Intra-chr q14.1 q14.1 Seq+ 14088 ChimerSeq FusionScan TCGA_RNA-Seq UVRAG-MAP6 UVRAG chr11 75526569 + MAP6 chr11 75299229 - Exonic hg19 STAD TCGA-RD-A8N4 6 Out-of-Frame Intra-chr q13.5 Tumor suppressor gene q13.5 Seq+ 14089 ChimerSeq FusionScan TCGA_RNA-Seq PAK1-C11orf67 PAK1 chr11 77085372 - C11orf67 chr11 77580767 + Exonic hg19 STAD TCGA-RD-A8N4 5 In-Frame Intra-chr q14.1 STE:STE20 Seq+ 14090 ChimerSeq FusionScan TCGA_RNA-Seq UVRAG-MAP6 UVRAG chr11 75526569 + MAP6 chr11 75317049 - Exonic hg19 STAD TCGA-RD-A8N4 4 In-Frame Intra-chr q13.5 Tumor suppressor gene q13.5 Seq+ 14091 ChimerSeq FusionScan TCGA_RNA-Seq PPIP5K1-CATSPER2P1 PPIP5K1 chr15 43856300 - CATSPER2P1 chr15 44036766 - Exonic hg19 STAD TCGA-RD-A8N4 2 CDS-3'UTR Intra-chr q15.3 q15.3 14092 ChimerSeq FusionScan TCGA_RNA-Seq WFDC11-RNF115 WFDC11 chr20 44298816 - RNF115 chr1 145646114 + Exonic hg19 STAD TCGA-RD-A8N4 2 5'UTR-CDS Inter-chr q13.12 q21.1 14093 ChimerSeq FusionScan TCGA_RNA-Seq PLXNB1-TNS1 PLXNB1 chr3 48470661 - TNS1 chr2 218686661 - Exonic hg19 STAD TCGA-RD-A8N4 2 5'UTR-CDS Inter-chr p21.31 q35 14094 ChimerSeq FusionScan TCGA_RNA-Seq ITGA7-PCBP2 ITGA7 chr12 56096655 - PCBP2 chr12 53856276 + Exonic hg19 STAD TCGA-RD-A8N4 2 In-Frame Intra-chr q13.2 Tumor suppressor gene q13.13 14095 ChimerSeq FusionScan TCGA_RNA-Seq ZADH2-PPP1R12C ZADH2 chr18 72920804 - PPP1R12C chr19 55607703 - Exonic hg19 STAD TCGA-RD-A8N4 2 Out-of-Frame Inter-chr q22.3 q13.42 14096 ChimerSeq FusionScan TCGA_RNA-Seq KPNA1-EEF1G KPNA1 chr3 122233603 - EEF1G chr11 62327926 - Exonic hg19 STAD TCGA-D7-A6EZ 6 5'UTR-CDS Inter-chr q21.1 q12.3 Seq+ 14097 ChimerSeq FusionScan TCGA_RNA-Seq DANCR-PRKCA DANCR chr4 53579126 + PRKCA chr17 64799990 + Exonic hg19 STAD TCGA-D7-A6EZ 2 5'UTR-CDS Inter-chr q12 q24.2 14098 ChimerSeq FusionScan TCGA_RNA-Seq SEPT2-HDLBP SEPT2 chr2 242255397 + HDLBP chr2 242207956 - Exonic hg19 STAD TCGA-D7-A6EZ 2 5'UTR-5'UTR Intra-chr q37.3 q37.3 14099 ChimerSeq FusionScan TCGA_RNA-Seq CREBBP-EIF2AK2 CREBBP chr16 3929832 - EIF2AK2 chr2 37353554 - Exonic hg19 STAD TCGA-D7-A6EZ 2 Out-of-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene p22.2 14100 ChimerSeq FusionScan TCGA_RNA-Seq UBE2G1-TBC1D16 UBE2G1 chr17 4269565 - TBC1D16 chr17 77926617 - Exonic hg19 STAD TCGA-D7-A6EZ 2 Out-of-Frame Intra-chr p13.2 q25.3 14101 ChimerSeq FusionScan TCGA_RNA-Seq TEAD4-SMAGP TEAD4 chr12 3069206 + SMAGP chr12 51640615 - Exonic hg19 STAD TCGA-D7-A6EZ 2 5'UTR-CDS Intra-chr p13.33 Transcription factor q13.13 14102 ChimerSeq FusionScan TCGA_RNA-Seq SLC11A2-R3HDM2 SLC11A2 chr12 51402258 - R3HDM2 chr12 57652842 - Exonic hg19 STAD TCGA-D7-A6EZ 2 Out-of-Frame Intra-chr q13.12 q13.3 14103 ChimerSeq FusionScan TCGA_RNA-Seq CSNK1D-VCP CSNK1D chr17 80213304 - VCP chr9 35059798 - Exonic hg19 STAD TCGA-D7-A6EZ 2 In-Frame Inter-chr q25.3 p13.3 14104 ChimerSeq FusionScan TCGA_RNA-Seq UXS1-FHL2 UXS1 chr2 106739425 - FHL2 chr2 106002997 - Exonic hg19 STAD TCGA-CG-5726 2 CDS-5'UTR Intra-chr q12.2 q12.2 14105 ChimerSeq FusionScan TCGA_RNA-Seq HPS3-NRIP1 HPS3 chr3 148847727 + NRIP1 chr21 16415895 - Exonic hg19 STAD TCGA-CG-5726 2 CDS-5'UTR Inter-chr q24 q21.1 14106 ChimerSeq FusionScan TCGA_RNA-Seq FCGRT-SNUPN FCGRT chr19 50017743 + SNUPN chr15 75891022 - Exonic hg19 STAD TCGA-CG-5726 2 Out-of-Frame Inter-chr q13.33 q24.2 14107 ChimerSeq FusionScan TCGA_RNA-Seq TMEM106C-SENP1 TMEM106C chr12 48358206 + SENP1 chr12 48482743 - Exonic hg19 STAD TCGA-CG-5726 2 In-Frame Intra-chr q13.11 q13.11 14108 ChimerSeq FusionScan TCGA_RNA-Seq SLC12A7-STK25 SLC12A7 chr5 1093647 - STK25 chr2 242441123 - Exonic hg19 STAD TCGA-ZQ-A9CR 2 In-Frame Inter-chr p15.33 q37.3 14109 ChimerSeq FusionScan TCGA_RNA-Seq TCF4-PMAIP1 TCF4 chr18 52928696 - PMAIP1 chr18 57569878 + Exonic hg19 STAD TCGA-ZQ-A9CR 2 Out-of-Frame Intra-chr q21.2 Tumor suppressor gene Transcription factor q21.32 14110 ChimerSeq FusionScan TCGA_RNA-Seq FBRSL1-UBC FBRSL1 chr12 133067447 + UBC chr12 125398320 - Exonic hg19 STAD TCGA-ZQ-A9CR 2 CDS-5'UTR Intra-chr q24.33 q24.31 14111 ChimerSeq FusionScan TCGA_RNA-Seq STK3-SPAG1 STK3 chr8 99718694 - SPAG1 chr8 101190043 + Exonic hg19 STAD TCGA-ZQ-A9CR 2 In-Frame Intra-chr q22.2 q22.2 14112 ChimerSeq FusionScan TCGA_RNA-Seq UBE3B-GNS UBE3B chr12 109919547 + GNS chr12 65122837 - Exonic hg19 STAD TCGA-KB-A93J 6 5'UTR-CDS Intra-chr q24.11 q14.3 Seq+ 14113 ChimerSeq FusionScan TCGA_RNA-Seq FAM83D-WHSC2 FAM83D chr20 37555568 + WHSC2 chr4 1993442 - Exonic hg19 STAD TCGA-KB-A93J 6 In-Frame Inter-chr q11.23 14114 ChimerSeq FusionScan TCGA_RNA-Seq TBXAS1-TOMM7 TBXAS1 chr7 139529278 + TOMM7 chr7 22857667 - Exonic hg19 STAD TCGA-KB-A93J 4 Out-of-Frame Intra-chr q34 p15.3 Seq+ 14115 ChimerSeq FusionScan TCGA_RNA-Seq WHSC2-FAM83D WHSC2 chr4 2010476 - FAM83D chr20 37570601 + Exonic hg19 STAD TCGA-KB-A93J 3 In-Frame Inter-chr q11.23 14116 ChimerSeq FusionScan TCGA_RNA-Seq GNA13-TOM1 GNA13 chr17 63049619 - TOM1 chr22 35713869 + Exonic hg19 STAD TCGA-KB-A93J 3 Out-of-Frame Inter-chr q24.1 q12.3 Seq+ 14117 ChimerSeq FusionScan TCGA_RNA-Seq ARPP19-AATF ARPP19 chr15 52861044 - AATF chr17 35376303 + Exonic hg19 STAD TCGA-KB-A93J 2 In-Frame Inter-chr q21.2 14118 ChimerSeq FusionScan TCGA_RNA-Seq EVI5-KIAA0391 EVI5 chr1 93029198 - KIAA0391 chr14 35735932 + Exonic hg19 STAD TCGA-KB-A93J 2 In-Frame Inter-chr p22.1 q13.2 14119 ChimerSeq FusionScan TCGA_RNA-Seq C10orf11-HABP2 C10orf11 chr10 77818541 + HABP2 chr10 115327247 + Exonic hg19 STAD TCGA-KB-A93J 2 In-Frame Intra-chr q25.3 14120 ChimerSeq FusionScan TCGA_RNA-Seq KIF21A-CCDC114 KIF21A chr12 39724547 - CCDC114 chr19 48815373 - Exonic hg19 STAD TCGA-KB-A93J 2 Out-of-Frame Inter-chr q12 q13.33 Seq+ 14121 ChimerSeq FusionScan TCGA_RNA-Seq B4GALT1-FAM75D5 B4GALT1 chr9 33135186 - FAM75D5 chr9 84529962 + Exonic hg19 STAD TCGA-KB-A93J 2 CDS-5'UTR Intra-chr p21.1 14122 ChimerSeq FusionScan TCGA_RNA-Seq APAF1-FMN1 APAF1 chr12 99065497 + FMN1 chr15 33261678 - Exonic hg19 STAD TCGA-KB-A93J 2 Out-of-Frame Inter-chr q23.1 Tumor suppressor gene 14123 ChimerSeq FusionScan TCGA_RNA-Seq CARM1-HAUS8 CARM1 chr19 10982598 + HAUS8 chr19 17170899 - Exonic hg19 STAD TCGA-KB-A93J 2 In-Frame Intra-chr p13.2 p13.11 14124 ChimerSeq FusionScan TCGA_RNA-Seq TOM1-GNA13 TOM1 chr22 35695973 + GNA13 chr17 63014421 - Exonic hg19 STAD TCGA-KB-A93J 2 Out-of-Frame Inter-chr q12.3 q24.1 Seq+ 14125 ChimerSeq FusionScan TCGA_RNA-Seq SNHG8-ARHGDIA SNHG8 chr4 119200292 + ARHGDIA chr17 79827833 - Exonic hg19 STAD TCGA-CG-5721 2 5'UTR-5'UTR Inter-chr q26 q25.3 14126 ChimerSeq FusionScan TCGA_RNA-Seq HSPD1-C17orf101 HSPD1 chr2 198360017 - C17orf101 chr17 80350410 - Exonic hg19 STAD TCGA-CG-5721 2 Out-of-Frame Inter-chr q33.1 Tumor suppressor gene 14127 ChimerSeq FusionScan TCGA_RNA-Seq FKBP15-FARSB FKBP15 chr9 115983470 - FARSB chr2 223436741 - Exonic hg19 STAD TCGA-CG-5721 2 Out-of-Frame Inter-chr q32 q36.1 Seq+ 14128 ChimerSeq FusionScan TCGA_RNA-Seq SNHG8-SERINC2 SNHG8 chr4 119200292 + SERINC2 chr1 31905813 + Exonic hg19 STAD TCGA-CG-5721 2 5'UTR-CDS Inter-chr q26 p35.2 14129 ChimerSeq FusionScan TCGA_RNA-Seq EPB41L2-SUPT5H EPB41L2 chr6 131222101 - SUPT5H chr19 39959901 + Exonic hg19 STAD TCGA-CG-5721 2 Out-of-Frame Inter-chr q23.2 q13.2 14130 ChimerSeq FusionScan TCGA_RNA-Seq AVL9-MICU1 AVL9 chr7 32535414 + MICU1 chr10 74268027 - Exonic hg19 STAD TCGA-CG-5721 2 In-Frame Inter-chr p14.3 q22.1 14131 ChimerSeq FusionScan TCGA_RNA-Seq FMR1-NDUFS6 FMR1 chrX 146993748 + NDUFS6 chr5 1814452 + Exonic hg19 STAD TCGA-CG-5721 2 In-Frame Inter-chr q27.3 p15.33 14132 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC17-SERINC2 ZCCHC17 chr1 31821821 + SERINC2 chr1 31883231 + Exonic hg19 STAD TCGA-CG-5721 2 In-Frame Intra-chr p35.2 p35.2 14133 ChimerSeq FusionScan TCGA_RNA-Seq SLC35B1-FN1 SLC35B1 chr17 47783227 - FN1 chr2 216259442 - Exonic hg19 STAD TCGA-CG-5721 2 In-Frame Inter-chr q21.33 q35 Oncogene 14134 ChimerSeq FusionScan TCGA_RNA-Seq CD99L2-TBCEL CD99L2 chrX 149999703 - TBCEL chr11 120957486 + Exonic hg19 STAD TCGA-CG-5716 3 Out-of-Frame Inter-chr q28 q23.3 14135 ChimerSeq FusionScan TCGA_RNA-Seq RC3H2-EMP3 RC3H2 chr9 125616230 - EMP3 chr19 48833557 + Exonic hg19 STAD TCGA-CG-5716 2 Out-of-Frame Inter-chr q33.2 q13.33 14136 ChimerSeq FusionScan TCGA_RNA-Seq ZNF292-SNX14 ZNF292 chr6 87928449 + SNX14 chr6 86267778 - Exonic hg19 STAD TCGA-CG-5716 2 Out-of-Frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q14.3 14137 ChimerSeq FusionScan TCGA_RNA-Seq TUBB6-OSBPL1A TUBB6 chr18 12308794 + OSBPL1A chr18 21761243 - Exonic hg19 STAD TCGA-D7-A6EV 7 Out-of-Frame Intra-chr p11.21 q11.2 Seq+ 14138 ChimerSeq FusionScan TCGA_RNA-Seq ACIN1-HAUS4 ACIN1 chr14 23547359 - HAUS4 chr14 23424385 - Exonic hg19 STAD TCGA-D7-A6EV 2 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 14139 ChimerSeq FusionScan TCGA_RNA-Seq RRM2B-IPO5 RRM2B chr8 103251054 - IPO5 chr13 98673245 + Exonic hg19 STAD TCGA-D7-A6EV 2 Out-of-Frame Inter-chr q22.3 q32.2 14140 ChimerSeq FusionScan TCGA_RNA-Seq CSNK1E-GMPPA CSNK1E chr22 38689260 - GMPPA chr2 220364677 + Exonic hg19 STAD TCGA-D7-A6EV 2 3'UTR-5'UTR Inter-chr q13.1 q35 14141 ChimerSeq FusionScan TCGA_RNA-Seq AP3B1-CAMLG AP3B1 chr5 77511878 - CAMLG chr5 134086448 + Exonic hg19 STAD TCGA-VQ-AA6J 16 In-Frame Intra-chr q14.1 q31.1 Seq+ 14142 ChimerSeq FusionScan TCGA_RNA-Seq XKR6-HOOK3 XKR6 chr8 11058084 - HOOK3 chr8 42821615 + Exonic hg19 STAD TCGA-VQ-AA6J 6 In-Frame Intra-chr p23.1 p11.21 Oncogene Seq+ 14143 ChimerSeq FusionScan TCGA_RNA-Seq TRPM4-PPFIA3 TRPM4 chr19 49675365 + PPFIA3 chr19 49636257 + Exonic hg19 STAD TCGA-VQ-AA6J 3 Out-of-Frame Intra-chr q13.33 q13.33 Seq+ 14144 ChimerSeq FusionScan TCGA_RNA-Seq CSDE1-ERI3 CSDE1 chr1 115300545 - ERI3 chr1 44804994 - Exonic hg19 STAD TCGA-VQ-AA6J 2 5'UTR-CDS Intra-chr p13.2 p34.1 14145 ChimerSeq FusionScan TCGA_RNA-Seq SULF2-KLF16 SULF2 chr20 46414791 - KLF16 chr19 1854759 - Exonic hg19 STAD TCGA-BR-8297 2 5'UTR-CDS Inter-chr q13.12 p13.3 Transcription factor 14146 ChimerSeq FusionScan TCGA_RNA-Seq MIR22HG-DECR2 MIR22HG chr17 1619423 - DECR2 chr16 460971 + Exonic hg19 STAD TCGA-BR-8297 2 3'UTR-CDS Inter-chr 14147 ChimerSeq FusionScan TCGA_RNA-Seq SEC62-PARP14 SEC62 chr3 169684646 + PARP14 chr3 122446658 + Exonic hg19 STAD TCGA-BR-8297 2 In-Frame Intra-chr q26.2 q21.1 14148 ChimerSeq FusionScan TCGA_RNA-Seq ELL-LRRC25 ELL chr19 18632730 - LRRC25 chr19 18502935 - Exonic hg19 STAD TCGA-BR-8297 2 Out-of-Frame Intra-chr p13.11 p13.11 Seq+ 14149 ChimerSeq FusionScan TCGA_RNA-Seq POLA2-PSMD11 POLA2 chr11 65036200 + PSMD11 chr17 30804538 + Exonic hg19 STAD TCGA-BR-8297 2 In-Frame Inter-chr q13.1 q11.2 14150 ChimerSeq FusionScan TCGA_RNA-Seq AHI1-NIN AHI1 chr6 135818325 - NIN chr14 51211083 - Exonic hg19 STAD TCGA-BR-8297 2 5'UTR-CDS Inter-chr q23.3 q22.1 Oncogene 14151 ChimerSeq FusionScan TCGA_RNA-Seq GABPA-SKOR1 GABPA chr21 27107889 + SKOR1 chr15 68118273 + Exonic hg19 STAD TCGA-BR-8297 2 5'UTR-CDS Inter-chr q21.3 Transcription factor q23 Transcription factor 14152 ChimerSeq FusionScan TCGA_RNA-Seq LEPROT-CROT LEPROT chr1 65891061 + CROT chr7 87020904 + Exonic hg19 STAD TCGA-BR-8297 2 In-Frame Inter-chr p31.3 q21.12 14153 ChimerSeq FusionScan TCGA_RNA-Seq XPO7-MYOM2 XPO7 chr8 21777299 + MYOM2 chr8 2088645 + Exonic hg19 STAD TCGA-VQ-A91N 16 Out-of-Frame Intra-chr p21.3 p23.3 Seq+ 14154 ChimerSeq FusionScan TCGA_RNA-Seq RBM47-APBB2 RBM47 chr4 40468593 - APBB2 chr4 40895428 - Exonic hg19 STAD TCGA-VQ-A91N 11 5'UTR-CDS Intra-chr p14 p13 Seq+ 14155 ChimerSeq FusionScan TCGA_RNA-Seq MSRA-LPL MSRA chr8 10102733 + LPL chr8 19805690 + Exonic hg19 STAD TCGA-VQ-A91N 9 In-Frame Intra-chr p23.1 p21.3 Seq+ 14156 ChimerSeq FusionScan TCGA_RNA-Seq RBM6-RNF123 RBM6 chr3 49977658 + RNF123 chr3 49749911 + Exonic hg19 STAD TCGA-VQ-A91N 8 5'UTR-CDS Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 14157 ChimerSeq FusionScan TCGA_RNA-Seq TFB2M-SMYD3 TFB2M chr1 246727647 - SMYD3 chr1 246093239 - Exonic hg19 STAD TCGA-VQ-A91N 6 In-Frame Intra-chr q44 q44 Transcription factor Seq+ 14158 ChimerSeq FusionScan TCGA_RNA-Seq PAK2-CHCHD6 PAK2 chr3 196467028 + CHCHD6 chr3 126571489 + Exonic hg19 STAD TCGA-VQ-A91N 6 5'UTR-CDS Intra-chr q29 STE:STE20 q21.3 Seq+ 14159 ChimerSeq FusionScan TCGA_RNA-Seq NPHP4-ACOT7 NPHP4 chr1 6038329 - ACOT7 chr1 6341346 - Exonic hg19 STAD TCGA-VQ-A91N 5 Out-of-Frame Intra-chr p36.31 p36.31 Seq+ 14160 ChimerSeq FusionScan TCGA_RNA-Seq PINX1-MSRA PINX1 chr8 10689174 - MSRA chr8 10065342 + Exonic hg19 STAD TCGA-VQ-A91N 5 In-Frame Intra-chr p23.1 Tumor suppressor gene p23.1 Seq+ 14161 ChimerSeq FusionScan TCGA_RNA-Seq MCU-CHST3 MCU chr10 74452059 + CHST3 chr10 73765493 + Exonic hg19 STAD TCGA-VQ-A91N 4 CDS-5'UTR Intra-chr q22.1 q22.1 Seq+ 14162 ChimerSeq FusionScan TCGA_RNA-Seq TRIM35-PEBP4 TRIM35 chr8 27168317 - PEBP4 chr8 22785233 - Exonic hg19 STAD TCGA-VQ-A91N 4 CDS-5'UTR Intra-chr p21.2 Tumor suppressor gene p21.3 Seq+ 14163 ChimerSeq FusionScan TCGA_RNA-Seq SLC39A14-PDGFRL SLC39A14 chr8 22224921 + PDGFRL chr8 17478559 + Exonic hg19 STAD TCGA-VQ-A91N 3 5'UTR-CDS Intra-chr p21.3 p22 Tumor suppressor gene Seq+ 14164 ChimerSeq FusionScan TCGA_RNA-Seq NPRL3-WDR24 NPRL3 chr16 180520 - WDR24 chr16 735990 - Exonic hg19 STAD TCGA-VQ-A91N 3 In-Frame Intra-chr p13.3 p13.3 14165 ChimerSeq FusionScan TCGA_RNA-Seq RBM6-RNF123 RBM6 chr3 49977658 + RNF123 chr3 49742416 + Exonic hg19 STAD TCGA-VQ-A91N 3 5'UTR-CDS Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 14166 ChimerSeq FusionScan TCGA_RNA-Seq RBM6-RNF123 RBM6 chr3 49977658 + RNF123 chr3 49744223 + Exonic hg19 STAD TCGA-VQ-A91N 3 5'UTR-CDS Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 14167 ChimerSeq FusionScan TCGA_RNA-Seq USP39-ELMOD3 USP39 chr2 85850905 + ELMOD3 chr2 85616873 + Exonic hg19 STAD TCGA-VQ-A91N 3 In-Frame Intra-chr p11.2 p11.2 Seq+ 14168 ChimerSeq FusionScan TCGA_RNA-Seq TRIM35-PEBP4 TRIM35 chr8 27168317 - PEBP4 chr8 22777823 - Exonic hg19 STAD TCGA-VQ-A91N 2 Out-of-Frame Intra-chr p21.2 Tumor suppressor gene p21.3 Seq+ 14169 ChimerSeq FusionScan TCGA_RNA-Seq RBM6-RNF123 RBM6 chr3 49977658 + RNF123 chr3 49743414 + Exonic hg19 STAD TCGA-VQ-A91N 2 5'UTR-CDS Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 14170 ChimerSeq FusionScan TCGA_RNA-Seq SLC39A14-DEFB135 SLC39A14 chr8 22225250 + DEFB135 chr8 11841929 + Exonic hg19 STAD TCGA-VQ-A91N 2 5'UTR-CDS Intra-chr p21.3 p23.1 Seq+ 14171 ChimerSeq FusionScan TCGA_RNA-Seq IGSF1-LRPPRC IGSF1 chrX 130420578 - LRPPRC chr2 44139697 - Exonic hg19 STAD TCGA-VQ-A91N 2 In-Frame Inter-chr q26.2 p21 14172 ChimerSeq FusionScan TCGA_RNA-Seq GCNT3-RAC1 GCNT3 chr15 59909080 + RAC1 chr7 6426842 + Exonic hg19 STAD TCGA-VQ-A91N 2 5'UTR-CDS Inter-chr q22.2 p22.1 Oncogene 14173 ChimerSeq FusionScan TCGA_RNA-Seq DOCK5-DLC1 DOCK5 chr8 25042466 + DLC1 chr8 12973166 - Exonic hg19 STAD TCGA-VQ-A91N 2 In-Frame Intra-chr p21.2 p22 Tumor suppressor gene 14174 ChimerSeq FusionScan TCGA_RNA-Seq BOP1-TONSL BOP1 chr8 145500211 - TONSL chr8 145655920 - Exonic hg19 STAD TCGA-VQ-A91N 2 Out-of-Frame Intra-chr q24.3 q24.3 Seq+ 14175 ChimerSeq FusionScan TCGA_RNA-Seq KCTD20-BRPF3 KCTD20 chr6 36410888 + BRPF3 chr6 36168073 + Exonic hg19 STAD TCGA-VQ-A91N 2 5'UTR-5'UTR Intra-chr p21.31 p21.31 Seq+ 14176 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 STAD TCGA-VQ-A91N 2 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 14177 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-WIPF2 GRB7 chr17 37894645 + WIPF2 chr17 38430041 + Exonic hg19 STAD TCGA-BR-8381 2 5'UTR-CDS Intra-chr q12 q21.2 Seq+ 14178 ChimerSeq FusionScan TCGA_RNA-Seq SLC44A3-SRSF11 SLC44A3 chr1 95332973 + SRSF11 chr1 70687297 + Exonic hg19 STAD TCGA-BR-8381 2 CDS-5'UTR Intra-chr p21.3 p31.1 14179 ChimerSeq FusionScan TCGA_RNA-Seq SPTAN1-CEP250 SPTAN1 chr9 131340524 + CEP250 chr20 34090217 + Exonic hg19 STAD TCGA-BR-8381 2 In-Frame Inter-chr q34.11 q11.22 14180 ChimerSeq FusionScan TCGA_RNA-Seq AGAP1-CXCR7 AGAP1 chr2 236403493 + CXCR7 chr2 237489082 + Exonic hg19 STAD TCGA-BR-8381 2 CDS-5'UTR Intra-chr q37.2 14181 ChimerSeq FusionScan TCGA_RNA-Seq TMEM132B-DYNC1I2 TMEM132B chr12 126137178 + DYNC1I2 chr2 172546656 + Exonic hg19 STAD TCGA-BR-8381 2 CDS-5'UTR Inter-chr q24.31 q31.1 14182 ChimerSeq FusionScan TCGA_RNA-Seq ILF3-POC5 ILF3 chr19 10794646 + POC5 chr5 74970403 - Exonic hg19 STAD TCGA-BR-8381 2 Out-of-Frame Inter-chr p13.2 q13.3 14183 ChimerSeq FusionScan TCGA_RNA-Seq TIPIN-PTPN9 TIPIN chr15 66648976 - PTPN9 chr15 75819602 - Exonic hg19 STAD TCGA-BR-8381 2 5'UTR-CDS Intra-chr q22.31 q24.2 14184 ChimerSeq FusionScan TCGA_RNA-Seq TNKS2-PDCD4 TNKS2 chr10 93617287 + PDCD4 chr10 112640990 + Exonic hg19 STAD TCGA-BR-8381 2 In-Frame Intra-chr q23.32 q25.2 Tumor suppressor gene 14185 ChimerSeq FusionScan TCGA_RNA-Seq FBXO46-LGALS4 FBXO46 chr19 46234106 - LGALS4 chr19 39297235 - Exonic hg19 STAD TCGA-VQ-A8PE 55 5'UTR-CDS Intra-chr q13.32 Seq+ 14186 ChimerSeq FusionScan TCGA_RNA-Seq DSTN-BANF2 DSTN chr20 17585276 + BANF2 chr20 17716309 + Exonic hg19 STAD TCGA-VQ-A8PE 15 Out-of-Frame Intra-chr p12.1 p12.1 Seq+ 14187 ChimerSeq FusionScan TCGA_RNA-Seq KLHL5-UBE2K KLHL5 chr4 39046716 + UBE2K chr4 39739039 + Exonic hg19 STAD TCGA-VQ-A8PE 8 5'UTR-CDS Intra-chr p14 p14 Seq+ 14188 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0100-MYO18A KIAA0100 chr17 26959959 - MYO18A chr17 27414139 - Exonic hg19 STAD TCGA-VQ-A8PE 7 Out-of-Frame Intra-chr q11.2 q11.2 Oncogene Seq+ 14189 ChimerSeq FusionScan TCGA_RNA-Seq BCL7A-PSMD9 BCL7A chr12 122481959 + PSMD9 chr12 122337539 + Exonic hg19 STAD TCGA-VQ-A8PE 6 In-Frame Intra-chr q24.31 Seq+ 14190 ChimerSeq FusionScan TCGA_RNA-Seq LETM1-SLBP LETM1 chr4 1821064 - SLBP chr4 1705427 - Exonic hg19 STAD TCGA-VQ-A8PE 6 Out-of-Frame Intra-chr p16.3 p16.3 Seq+ 14191 ChimerSeq FusionScan TCGA_RNA-Seq ARMC6-UBA52 ARMC6 chr19 19144739 + UBA52 chr19 18684102 + Exonic hg19 STAD TCGA-VQ-A8PE 6 5'UTR-5'UTR Intra-chr p13.11 p13.11 Seq+ 14192 ChimerSeq FusionScan TCGA_RNA-Seq ZNF451-PRIM2 ZNF451 chr6 56963939 + PRIM2 chr6 57183234 + Exonic hg19 STAD TCGA-VQ-A8PE 6 CDS-5'UTR Intra-chr p12.1 Transcription factor p11.2 Seq+ 14193 ChimerSeq FusionScan TCGA_RNA-Seq CLEC16A-ATF7IP2 CLEC16A chr16 11154879 + ATF7IP2 chr16 10574735 + Exonic hg19 STAD TCGA-VQ-A8PE 4 In-Frame Intra-chr p13.13 p13.2 Seq+ 14194 ChimerSeq FusionScan TCGA_RNA-Seq SLMAP-RPP14 SLMAP chr3 57743576 + RPP14 chr3 58302241 + Exonic hg19 STAD TCGA-VQ-A8PE 4 In-Frame Intra-chr p14.3 p14.3 Seq+ 14195 ChimerSeq FusionScan TCGA_RNA-Seq ETV4-CHID1 ETV4 chr17 41622342 - CHID1 chr11 870499 - Exonic hg19 STAD TCGA-VQ-A8PE 4 Out-of-Frame Inter-chr q21.31 Oncogene Transcription factor p15.5 Seq+ 14196 ChimerSeq FusionScan TCGA_RNA-Seq SRC-PTPRT SRC chr20 35993680 + PTPRT chr20 40790182 - Exonic hg19 STAD TCGA-VQ-A8PE 4 5'UTR-CDS Intra-chr q11.23 TK:Src Oncogene q13.11 Oncogene Tumor suppressor gene Seq+ 14197 ChimerSeq FusionScan TCGA_RNA-Seq KHDRBS1-LCK KHDRBS1 chr1 32505174 + LCK chr1 32739925 + Exonic hg19 STAD TCGA-VQ-A8PE 3 CDS-5'UTR Intra-chr p35.2 p35.2 TK:Src Oncogene Seq+ 14198 ChimerSeq FusionScan TCGA_RNA-Seq VPS13B-SPAG1 VPS13B chr8 100205285 + SPAG1 chr8 101203617 + Exonic hg19 STAD TCGA-VQ-A8PE 3 In-Frame Intra-chr q22.2 q22.2 Seq+ 14199 ChimerSeq FusionScan TCGA_RNA-Seq TRPC4AP-NCOA6 TRPC4AP chr20 33642778 - NCOA6 chr20 33380366 - Exonic hg19 STAD TCGA-VQ-A8PE 2 CDS-5'UTR Intra-chr q11.22 q11.22 14200 ChimerSeq FusionScan TCGA_RNA-Seq SMC3-ADD3 SMC3 chr10 112344154 + ADD3 chr10 111893083 + Exonic hg19 STAD TCGA-VQ-A8PE 2 Out-of-Frame Intra-chr q25.2 q25.1 14201 ChimerSeq FusionScan TCGA_RNA-Seq CCAR1-DDX21 CCAR1 chr10 70482334 + DDX21 chr10 70723046 + Exonic hg19 STAD TCGA-VQ-A8PE 2 In-Frame Intra-chr q21.3 Tumor suppressor gene q22.1 14202 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0090-UBE2J2 KIAA0090 chr1 19564510 - UBE2J2 chr1 1203372 - Exonic hg19 STAD TCGA-VQ-A8PE 2 CDS-5'UTR Intra-chr p36.33 14203 ChimerSeq FusionScan TCGA_RNA-Seq ZFAND3-NUDT3 ZFAND3 chr6 37787792 + NUDT3 chr6 34256708 - Exonic hg19 STAD TCGA-VQ-A8PE 2 Out-of-Frame Intra-chr p21.2 p21.31 14204 ChimerSeq FusionScan TCGA_RNA-Seq SET-BRD1 SET chr9 131451934 + BRD1 chr22 50171461 - Exonic hg19 STAD TCGA-VQ-A8PE 2 In-Frame Inter-chr q34.11 q13.33 14205 ChimerSeq FusionScan TCGA_RNA-Seq BOK-MEOX1 BOK chr2 242501891 + MEOX1 chr17 41719400 - Exonic hg19 STAD TCGA-VQ-A8PE 2 In-Frame Inter-chr q37.3 q21.31 Transcription factor Seq+ 14206 ChimerSeq FusionScan TCGA_RNA-Seq ELL-CRLF1 ELL chr19 18632730 - CRLF1 chr19 18710656 - Exonic hg19 STAD TCGA-VQ-A8PE 2 Out-of-Frame Intra-chr p13.11 p13.11 Seq+ 14207 ChimerSeq FusionScan TCGA_RNA-Seq EPS15L1-SLC35E1 EPS15L1 chr19 16582723 - SLC35E1 chr19 16666208 - Exonic hg19 STAD TCGA-VQ-A8PE 2 In-Frame Intra-chr p13.11 p13.11 14208 ChimerSeq FusionScan TCGA_RNA-Seq SLC25A13-C7orf55 SLC25A13 chr7 95926209 - C7orf55 chr7 139030246 + Exonic hg19 STAD TCGA-CG-4477 5 In-Frame Intra-chr q21.3 Seq+ 14209 ChimerSeq FusionScan TCGA_RNA-Seq GFPT1-NF1 GFPT1 chr2 69565029 - NF1 chr17 29664836 + Exonic hg19 STAD TCGA-CG-4477 4 In-Frame Inter-chr p13.3 q11.2 Oncogene Tumor suppressor gene Seq+ 14210 ChimerSeq FusionScan TCGA_RNA-Seq SERPINH1-ZBTB44 SERPINH1 chr11 75273364 + ZBTB44 chr11 130131824 - Exonic hg19 STAD TCGA-CG-4477 3 5'UTR-5'UTR Intra-chr q13.5 q24.3 Transcription factor Seq+ 14211 ChimerSeq FusionScan TCGA_RNA-Seq C7orf55-SLC25A13 C7orf55 chr7 139026268 + SLC25A13 chr7 95906650 - Exonic hg19 STAD TCGA-CG-4477 2 In-Frame Intra-chr q21.3 Seq+ 14212 ChimerSeq FusionScan TCGA_RNA-Seq ASH1L-HNRNPC ASH1L chr1 155490890 - HNRNPC chr14 21702388 - Exonic hg19 STAD TCGA-CG-4477 2 CDS-5'UTR Inter-chr q22 Transcription factor q11.2 14213 ChimerSeq FusionScan TCGA_RNA-Seq NF1-GFPT1 NF1 chr17 29664600 + GFPT1 chr2 69556930 - Exonic hg19 STAD TCGA-CG-4477 2 In-Frame Inter-chr q11.2 Oncogene Tumor suppressor gene p13.3 Seq+ 14214 ChimerSeq FusionScan TCGA_RNA-Seq RPS3-UVRAG RPS3 chr11 75112777 + UVRAG chr11 75599872 + Exonic hg19 STAD TCGA-CG-4477 2 In-Frame Intra-chr q13.4 q13.5 Tumor suppressor gene 14215 ChimerSeq FusionScan TCGA_RNA-Seq CASC3-WIPF2 CASC3 chr17 38297860 + WIPF2 chr17 38412642 + Exonic hg19 STAD TCGA-HU-A4G6 6 CDS-5'UTR Intra-chr q21.1 q21.2 Seq+ 14216 ChimerSeq FusionScan TCGA_RNA-Seq OXR1-ANGPT1 OXR1 chr8 107670413 + ANGPT1 chr8 108359325 - Exonic hg19 STAD TCGA-HU-A4G6 3 Out-of-Frame Intra-chr q23.1 q23.1 14217 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R12C-MXI1 PPP1R12C chr19 55610151 - MXI1 chr10 111987946 + Exonic hg19 STAD TCGA-HU-A4G6 3 Out-of-Frame Inter-chr q13.42 q25.2 Tumor suppressor gene Transcription factor 14218 ChimerSeq FusionScan TCGA_RNA-Seq CDK6-C7orf23 CDK6 chr7 92300739 - C7orf23 chr7 86828373 - Exonic hg19 STAD TCGA-HU-A4G6 2 Out-of-Frame Intra-chr q21.2 CMGC:CDK Oncogene Tumor suppressor gene 14219 ChimerSeq FusionScan TCGA_RNA-Seq ESYT2-UBE3C ESYT2 chr7 158621779 - UBE3C chr7 157009560 + Exonic hg19 STAD TCGA-HU-A4G6 2 In-Frame Intra-chr q36.3 q36.3 14220 ChimerSeq FusionScan TCGA_RNA-Seq LYZ-EIF5A LYZ chr12 69742324 + EIF5A chr17 7215140 + Exonic hg19 STAD TCGA-HU-A4G6 2 CDS-3'UTR Inter-chr q15 p13.1 14221 ChimerSeq FusionScan TCGA_RNA-Seq RB1-ZNF207 RB1 chr13 48878185 + ZNF207 chr17 30692348 + Exonic hg19 STAD TCGA-HU-A4G6 2 Out-of-Frame Inter-chr q14.2 Oncogene Tumor suppressor gene q11.2 Transcription factor 14222 ChimerSeq FusionScan TCGA_RNA-Seq URGCP-UGP2 URGCP chr7 43965730 - UGP2 chr2 64083439 + Exonic hg19 STAD TCGA-HU-A4G6 2 5'UTR-5'UTR Inter-chr p13 p15 14223 ChimerSeq FusionScan TCGA_RNA-Seq PRSS3-UBE2R2 PRSS3 chr9 33750725 + UBE2R2 chr9 33886878 + Exonic hg19 STAD TCGA-HU-A4G6 2 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 14224 ChimerSeq FusionScan TCGA_RNA-Seq FAM172A-NFIA FAM172A chr5 93386435 - NFIA chr1 61553820 + Exonic hg19 STAD TCGA-HU-A4G6 2 In-Frame Inter-chr q15 Tumor suppressor gene p31.3 Transcription factor 14225 ChimerSeq FusionScan TCGA_RNA-Seq TAF1D-AUH TAF1D chr11 93470229 - AUH chr9 93976707 - Exonic hg19 STAD TCGA-HU-A4G6 2 Out-of-Frame Inter-chr q21 q22.31 14226 ChimerSeq FusionScan TCGA_RNA-Seq THOC2-PABPC1 THOC2 chrX 122761543 - PABPC1 chr8 101734315 - Exonic hg19 STAD TCGA-HU-A4G6 2 CDS-5'UTR Inter-chr q25 q22.3 14227 ChimerSeq FusionScan TCGA_RNA-Seq CBR4-ALG8 CBR4 chr4 169923221 - ALG8 chr11 77820627 - Exonic hg19 STAD TCGA-HU-A4G6 2 In-Frame Inter-chr q32.3 q14.1 14228 ChimerSeq FusionScan TCGA_RNA-Seq MED24-ERBB2 MED24 chr17 38185078 - ERBB2 chr17 37865570 + Exonic hg19 STAD TCGA-HU-A4G6 2 Out-of-Frame Intra-chr q21.1 q12 Oncogene 14229 ChimerSeq FusionScan TCGA_RNA-Seq VPS13B-RGS22 VPS13B chr8 100205285 + RGS22 chr8 100994344 - Exonic hg19 STAD TCGA-VQ-A8DZ 3 Out-of-Frame Intra-chr q22.2 q22.2 Seq+ 14230 ChimerSeq FusionScan TCGA_RNA-Seq TFB2M-SMYD3 TFB2M chr1 246719874 - SMYD3 chr1 246093239 - Exonic hg19 STAD TCGA-VQ-A8DZ 2 In-Frame Intra-chr q44 q44 Transcription factor Seq+ 14231 ChimerSeq FusionScan TCGA_RNA-Seq SPOP-TBC1D1 SPOP chr17 47755294 - TBC1D1 chr4 38091552 + Exonic hg19 STAD TCGA-VQ-A8DZ 2 5'UTR-CDS Inter-chr q21.33 Oncogene Tumor suppressor gene p14 14232 ChimerSeq FusionScan TCGA_RNA-Seq ANXA5-CCNA2 ANXA5 chr4 122602825 - CCNA2 chr4 122742246 - Exonic hg19 STAD TCGA-VQ-A8DZ 2 5'UTR-CDS Intra-chr q27 q27 14233 ChimerSeq FusionScan TCGA_RNA-Seq RGS17-IPCEF1 RGS17 chr6 153345396 - IPCEF1 chr6 154544377 - Exonic hg19 STAD TCGA-VQ-A8DZ 2 In-Frame Intra-chr q25.2 q25.2 14234 ChimerSeq FusionScan TCGA_RNA-Seq NIPAL2-RGS22 NIPAL2 chr8 99306230 - RGS22 chr8 100977658 - Exonic hg19 STAD TCGA-VQ-A8DZ 2 In-Frame Intra-chr q22.2 q22.2 Seq+ 14235 ChimerSeq FusionScan TCGA_RNA-Seq ABR-BAI1 ABR chr17 953289 - BAI1 chr8 143599498 + Exonic hg19 STAD TCGA-VQ-A8DZ 2 In-Frame Inter-chr p13.3 Seq+ 14236 ChimerSeq FusionScan TCGA_RNA-Seq NHLRC3-CHMP1A NHLRC3 chr13 39613848 + CHMP1A chr16 89713739 - Exonic hg19 STAD TCGA-CG-5724 2 In-Frame Inter-chr q13.3 q24.3 14237 ChimerSeq FusionScan TCGA_RNA-Seq ATP5C1-SRGAP1 ATP5C1 chr10 7830226 + SRGAP1 chr12 64377726 + Exonic hg19 STAD TCGA-CG-5724 2 Out-of-Frame Inter-chr p14 q14.2 Seq+ 14238 ChimerSeq FusionScan TCGA_RNA-Seq PPARD-UBE2D2 PPARD chr6 35314927 + UBE2D2 chr5 138979956 + Exonic hg19 STAD TCGA-CG-5724 2 Out-of-Frame Inter-chr p21.31 Transcription factor q31.2 Seq+ 14239 ChimerSeq FusionScan TCGA_RNA-Seq MED24-TBC1D3F MED24 chr17 38209550 - TBC1D3F chr17 36285543 + Exonic hg19 STAD TCGA-FP-A8CX 30 CDS-5'UTR Intra-chr q21.1 q12 14240 ChimerSeq FusionScan TCGA_RNA-Seq RAVER1-C19orf6 RAVER1 chr19 10439317 - C19orf6 chr19 1014472 - Exonic hg19 STAD TCGA-FP-A8CX 9 In-Frame Intra-chr p13.2 Seq+ 14241 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-ETHE1 CPSF6 chr12 69633486 + ETHE1 chr19 44015718 - Exonic hg19 STAD TCGA-FP-A8CX 3 In-Frame Inter-chr q15 q13.31 14242 ChimerSeq FusionScan TCGA_RNA-Seq GPR160-MED24 GPR160 chr3 169756831 + MED24 chr17 38209910 - Exonic hg19 STAD TCGA-FP-A8CX 3 5'UTR-5'UTR Inter-chr q26.2 q21.1 Seq+ 14243 ChimerSeq FusionScan TCGA_RNA-Seq LRRIQ4-MIEN1 LRRIQ4 chr3 169540729 + MIEN1 chr17 37886544 - Exonic hg19 STAD TCGA-FP-A8CX 3 Out-of-Frame Inter-chr q26.2 q12 Seq+ 14244 ChimerSeq FusionScan TCGA_RNA-Seq GLTPD1-MBD5 GLTPD1 chr1 1260482 + MBD5 chr2 148990813 + Exonic hg19 STAD TCGA-FP-A8CX 2 5'UTR-5'UTR Inter-chr q23.1 14245 ChimerSeq FusionScan TCGA_RNA-Seq GPR160-MED24 GPR160 chr3 169756831 + MED24 chr17 38209888 - Exonic hg19 STAD TCGA-FP-A8CX 2 5'UTR-5'UTR Inter-chr q26.2 q21.1 Seq+ 14246 ChimerSeq FusionScan TCGA_RNA-Seq TAF1C-ARAF TAF1C chr16 84215807 - ARAF chrX 47428937 + Exonic hg19 STAD TCGA-FP-A8CX 2 In-Frame Inter-chr q24.1 p11.3 TKL:RAF Oncogene 14247 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP42-WDR44 ARHGAP42 chr11 100558563 + WDR44 chrX 117566743 + Exonic hg19 STAD TCGA-FP-A8CX 2 Out-of-Frame Inter-chr q22.1 q24 14248 ChimerSeq FusionScan TCGA_RNA-Seq PTPRF-PSMD3 PTPRF chr1 44054671 + PSMD3 chr17 38146346 + Exonic hg19 STAD TCGA-FP-A8CX 2 In-Frame Inter-chr p34.2 q21.1 14249 ChimerSeq FusionScan TCGA_RNA-Seq C15orf57-TPT1 C15orf57 chr15 40849414 - TPT1 chr13 45911523 - Exonic hg19 STAD TCGA-FP-A8CX 2 Out-of-Frame Inter-chr q15.1 q14.13 14250 ChimerSeq FusionScan TCGA_RNA-Seq TAOK1-SSH2 TAOK1 chr17 27718042 + SSH2 chr17 28120955 - Exonic hg19 STAD TCGA-FP-A8CX 2 5'UTR-CDS Intra-chr q11.2 q11.2 14251 ChimerSeq FusionScan TCGA_RNA-Seq TMC5-DDX19B TMC5 chr16 19441962 + DDX19B chr16 70358487 + Exonic hg19 STAD TCGA-FP-A8CX 2 5'UTR-5'UTR Intra-chr p12.3 q22.1 14252 ChimerSeq FusionScan TCGA_RNA-Seq DNTTIP1-TAGLN2 DNTTIP1 chr20 44420748 + TAGLN2 chr1 159895284 - Exonic hg19 STAD TCGA-VQ-A91U 2 CDS-5'UTR Inter-chr q13.12 Transcription factor q23.2 14253 ChimerSeq FusionScan TCGA_RNA-Seq NXT2-COL4A5 NXT2 chrX 108784848 + COL4A5 chrX 107929260 + Exonic hg19 STAD TCGA-CD-A48C 13 In-Frame Intra-chr q23 q22.3 Seq+ 14254 ChimerSeq FusionScan TCGA_RNA-Seq PUM1-LAPTM5 PUM1 chr1 31501642 - LAPTM5 chr1 31215396 - Exonic hg19 STAD TCGA-CD-A48C 13 In-Frame Intra-chr p35.2 p35.2 Seq+ 14255 ChimerSeq FusionScan TCGA_RNA-Seq MARS-CLEC12A MARS chr12 57884427 + CLEC12A chr12 10124175 + Exonic hg19 STAD TCGA-CD-A48C 4 Out-of-Frame Intra-chr q13.3 p13.31 Seq+ 14256 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0528-SOX5 KIAA0528 chr12 22606829 - SOX5 chr12 23887686 - Exonic hg19 STAD TCGA-CD-A48C 3 In-Frame Intra-chr p12.1 Transcription factor Seq+ 14257 ChimerSeq FusionScan TCGA_RNA-Seq PUM1-LAPTM5 PUM1 chr1 31501642 - LAPTM5 chr1 31212784 - Exonic hg19 STAD TCGA-CD-A48C 3 In-Frame Intra-chr p35.2 p35.2 Seq+ 14258 ChimerSeq FusionScan TCGA_RNA-Seq MYSM1-MIS18A MYSM1 chr1 59155897 - MIS18A chr21 33642840 - Exonic hg19 STAD TCGA-CD-A48C 2 In-Frame Inter-chr p32.1 Transcription factor q22.11 14259 ChimerSeq FusionScan TCGA_RNA-Seq MYO5B-HTATIP2 MYO5B chr18 47361713 - HTATIP2 chr11 20388719 + Exonic hg19 STAD TCGA-CD-A48C 2 In-Frame Inter-chr q21.1 p15.1 Tumor suppressor gene 14260 ChimerSeq FusionScan TCGA_RNA-Seq FLJ39080-PI15 FLJ39080 chr8 75525175 + PI15 chr8 75756215 + Exonic hg19 STAD TCGA-CD-A48C 2 5'UTR-CDS Intra-chr q21.13 14261 ChimerSeq FusionScan TCGA_RNA-Seq MYOF-SF3B3 MYOF chr10 95241863 - SF3B3 chr16 70594371 + Exonic hg19 STAD TCGA-CD-A48C 2 Out-of-Frame Inter-chr q23.33 q22.1 Seq+ 14262 ChimerSeq FusionScan TCGA_RNA-Seq GNAS-CD47 GNAS chr20 57484634 + CD47 chr3 107766139 - Exonic hg19 STAD TCGA-CD-A48C 2 In-Frame Inter-chr q13.32 Oncogene q13.12 14263 ChimerSeq FusionScan TCGA_RNA-Seq MAP4K2-COL5A2 MAP4K2 chr11 64565097 - COL5A2 chr2 189927644 - Exonic hg19 STAD TCGA-B7-5816 2 Out-of-Frame Inter-chr q13.1 q32.2 14264 ChimerSeq FusionScan TCGA_RNA-Seq ATF7IP2-PAK2 ATF7IP2 chr16 10479979 + PAK2 chr3 196509496 + Exonic hg19 STAD TCGA-B7-5816 2 5'UTR-5'UTR Inter-chr p13.2 q29 STE:STE20 14265 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP39-SNX5 ARHGAP39 chr8 145830919 - SNX5 chr20 17923839 - Exonic hg19 STAD TCGA-VQ-A91E 2 Out-of-Frame Inter-chr q24.3 p11.23 14266 ChimerSeq FusionScan TCGA_RNA-Seq PILRB-PVRIG PILRB chr7 99950746 + PVRIG chr7 99818382 + Exonic hg19 STAD TCGA-VQ-A91E 2 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 14267 ChimerSeq FusionScan TCGA_RNA-Seq ATRX-DYM ATRX chrX 77041467 - DYM chr18 46645296 - Exonic hg19 STAD TCGA-VQ-A91E 2 Out-of-Frame Inter-chr q21.1 Oncogene q21.1 14268 ChimerSeq FusionScan TCGA_RNA-Seq XRCC4-AP3B1 XRCC4 chr5 82407022 + AP3B1 chr5 77461496 - Exonic hg19 STAD TCGA-VQ-A91E 2 In-Frame Intra-chr q14.2 q14.1 14269 ChimerSeq FusionScan TCGA_RNA-Seq USP3-B2M USP3 chr15 63797029 + B2M chr15 45007620 + Exonic hg19 STAD TCGA-VQ-A91E 2 In-Frame Intra-chr q22.31 Oncogene 14270 ChimerSeq FusionScan TCGA_RNA-Seq ZDHHC20-SPATA13 ZDHHC20 chr13 21987790 - SPATA13 chr13 24796956 + Exonic hg19 STAD TCGA-VQ-AA68 4 CDS-5'UTR Intra-chr q12.11 q12.12 Seq+ 14271 ChimerSeq FusionScan TCGA_RNA-Seq UGT1A10-SP100 UGT1A10 chr2 234546023 + SP100 chr2 231307651 + Exonic hg19 STAD TCGA-VQ-AA68 2 Out-of-Frame Intra-chr q37.1 q37.1 Tumor suppressor gene Transcription factor 14272 ChimerSeq FusionScan TCGA_RNA-Seq FAM190A-SPARCL1 FAM190A chr4 91389505 + SPARCL1 chr4 88394955 - Exonic hg19 STAD TCGA-VQ-AA68 2 Out-of-Frame Intra-chr q22.1 Tumor suppressor gene Seq+ 14273 ChimerSeq FusionScan TCGA_RNA-Seq LGALS3-FNDC3B LGALS3 chr14 55596018 + FNDC3B chr3 172046741 + Exonic hg19 STAD TCGA-VQ-AA68 2 5'UTR-CDS Inter-chr q22.3 q26.31 14274 ChimerSeq FusionScan TCGA_RNA-Seq DDX58-PRSS3 DDX58 chr9 32500802 - PRSS3 chr9 33796640 + Exonic hg19 STAD TCGA-CG-4444 8 In-Frame Intra-chr p21.1 Tumor suppressor gene p13.3 Seq+ 14275 ChimerSeq FusionScan TCGA_RNA-Seq MYO1E-GPR176 MYO1E chr15 59510089 - GPR176 chr15 40099459 - Exonic hg19 STAD TCGA-CG-4444 6 Out-of-Frame Intra-chr q22.2 q15.1 Seq+ 14276 ChimerSeq FusionScan TCGA_RNA-Seq PLAU-C10orf55 PLAU chr10 75672856 + C10orf55 chr10 75672833 - Exonic hg19 STAD TCGA-CG-4306 2 CDS-5'UTR Intra-chr q22.2 q22.2 14277 ChimerSeq FusionScan TCGA_RNA-Seq PUM1-NKAIN1 PUM1 chr1 31447497 - NKAIN1 chr1 31661034 - Exonic hg19 STAD TCGA-D7-6527 22 In-Frame Intra-chr p35.2 p35.2 Seq+ 14278 ChimerSeq FusionScan TCGA_RNA-Seq ZNF257-ARIH2 ZNF257 chr19 22235437 + ARIH2 chr3 49016914 + Exonic hg19 STAD TCGA-D7-6527 14 Out-of-Frame Inter-chr p12 Transcription factor p21.31 Seq+ 14279 ChimerSeq FusionScan TCGA_RNA-Seq PDCD6IP-GADL1 PDCD6IP chr3 33870461 + GADL1 chr3 30769907 - Exonic hg19 STAD TCGA-D7-6527 10 In-Frame Intra-chr p22.3 p23 Seq+ 14280 ChimerSeq FusionScan TCGA_RNA-Seq UBP1-EIF3K UBP1 chr3 33481227 - EIF3K chr19 39110976 + Exonic hg19 STAD TCGA-D7-6527 8 In-Frame Inter-chr p22.3 Transcription factor Seq+ 14281 ChimerSeq FusionScan TCGA_RNA-Seq TAF15-PDK3 TAF15 chr17 34136580 + PDK3 chrX 24549773 + Exonic hg19 STAD TCGA-D7-6527 6 Out-of-Frame Inter-chr q12 p22.11 Seq+ 14282 ChimerSeq FusionScan TCGA_RNA-Seq PPARGC1B-TCOF1 PPARGC1B chr5 149109983 + TCOF1 chr5 149740718 + Exonic hg19 STAD TCGA-D7-6527 4 In-Frame Intra-chr q32 q32 Seq+ 14283 ChimerSeq FusionScan TCGA_RNA-Seq SNX6-BAZ1A SNX6 chr14 35062250 - BAZ1A chr14 35243696 - Exonic hg19 STAD TCGA-D7-6527 4 In-Frame Intra-chr q13.1 q13.2 Seq+ 14284 ChimerSeq FusionScan TCGA_RNA-Seq GOLGA4-BCAS1 GOLGA4 chr3 37343823 + BCAS1 chr20 52591969 - Exonic hg19 STAD TCGA-D7-6527 3 Out-of-Frame Inter-chr p22.2 q13.2 14285 ChimerSeq FusionScan TCGA_RNA-Seq PTPRN2-DNAJC2 PTPRN2 chr7 158380249 - DNAJC2 chr7 102953548 - Exonic hg19 STAD TCGA-D7-6527 3 In-Frame Intra-chr q36.3 q22.1 Seq+ 14286 ChimerSeq FusionScan TCGA_RNA-Seq SLC35F5-ACTR3 SLC35F5 chr2 114512741 - ACTR3 chr2 114697535 + Exonic hg19 STAD TCGA-D7-6527 3 In-Frame Intra-chr q14.1 q14.1 14287 ChimerSeq FusionScan TCGA_RNA-Seq PHF17-CTSO PHF17 chr4 129731032 + CTSO chr4 156864416 - Exonic hg19 STAD TCGA-D7-6527 2 5'UTR-CDS Intra-chr q32.1 14288 ChimerSeq FusionScan TCGA_RNA-Seq TXNL4B-RPL22 TXNL4B chr16 72122885 - RPL22 chr1 6257816 - Exonic hg19 STAD TCGA-D7-6527 2 Out-of-Frame Inter-chr q22.2 p36.31 14289 ChimerSeq FusionScan TCGA_RNA-Seq TMEM63A-ACBD3 TMEM63A chr1 226040364 - ACBD3 chr1 226353701 - Exonic hg19 STAD TCGA-D7-6527 2 In-Frame Intra-chr q42.12 q42.12 14290 ChimerSeq FusionScan TCGA_RNA-Seq SMARCD3-NOS3 SMARCD3 chr7 150938577 - NOS3 chr7 150695444 + Exonic hg19 STAD TCGA-D7-6527 2 In-Frame Intra-chr q36.1 q36.1 14291 ChimerSeq FusionScan TCGA_RNA-Seq CLK1-ORC2 CLK1 chr2 201729286 - ORC2 chr2 201778715 - Exonic hg19 STAD TCGA-D7-6527 2 5'UTR-CDS Intra-chr q33.1 CMGC:CLK q33.1 Seq+ 14292 ChimerSeq FusionScan TCGA_RNA-Seq BACE2-FAM3B BACE2 chr21 42629253 + FAM3B chr21 42694849 + Exonic hg19 STAD TCGA-D7-6527 2 In-Frame Intra-chr q22.2 q22.3 Seq+ 14293 ChimerSeq FusionScan TCGA_RNA-Seq NCAPG2-ORC5 NCAPG2 chr7 158497414 - ORC5 chr7 103777340 - Exonic hg19 STAD TCGA-D7-6527 2 5'UTR-CDS Intra-chr q36.3 q22.2 Seq+ 14294 ChimerSeq FusionScan TCGA_RNA-Seq ADCK3-GUK1 ADCK3 chr1 227128100 + GUK1 chr1 228333211 + Exonic hg19 STAD TCGA-D7-6527 2 5'UTR-5'UTR Intra-chr Atypical:ABC1 q42.13 14295 ChimerSeq FusionScan TCGA_RNA-Seq QRICH1-FAM129C QRICH1 chr3 49081822 - FAM129C chr19 17654125 + Exonic hg19 STAD TCGA-D7-6527 2 Out-of-Frame Inter-chr p21.31 p13.11 14296 ChimerSeq FusionScan TCGA_RNA-Seq PNPO-KPNB1 PNPO chr17 46023759 + KPNB1 chr17 45735873 + Exonic hg19 STAD TCGA-D7-6527 2 Out-of-Frame Intra-chr q21.32 q21.32 14297 ChimerSeq FusionScan TCGA_RNA-Seq PXMP2-GOLGA3 PXMP2 chr12 133272632 + GOLGA3 chr12 133363373 - Exonic hg19 STAD TCGA-HF-7131 4 In-Frame Intra-chr q24.33 q24.33 Seq+ 14298 ChimerSeq FusionScan TCGA_RNA-Seq RNF128-CXorf57 RNF128 chrX 105970627 + CXorf57 chrX 105905244 + Exonic hg19 STAD TCGA-HF-7131 4 In-Frame Intra-chr q22.3 q22.3 Seq+ 14299 ChimerSeq FusionScan TCGA_RNA-Seq USP3-MYO1D USP3 chr15 63829355 + MYO1D chr17 30821933 - Exonic hg19 STAD TCGA-HF-7131 2 In-Frame Inter-chr q22.31 q11.2 Seq+ 14300 ChimerSeq FusionScan TCGA_RNA-Seq RPS29-PIGF RPS29 chr14 50052667 - PIGF chr2 46808730 - Exonic hg19 STAD TCGA-HF-7131 2 In-Frame Inter-chr q21.3 p21 Seq+ 14301 ChimerSeq FusionScan TCGA_RNA-Seq PRSS3-SKIL PRSS3 chr9 33750725 + SKIL chr3 170077486 + Exonic hg19 STAD TCGA-HF-7131 2 5'UTR-5'UTR Inter-chr p13.3 q26.2 Tumor suppressor gene Transcription factor 14302 ChimerSeq FusionScan TCGA_RNA-Seq PCLO-CDK14 PCLO chr7 82595086 - CDK14 chr7 90376995 + Exonic hg19 STAD TCGA-D7-A6EX 3 In-Frame Intra-chr q21.11 q21.13 Seq+ 14303 ChimerSeq FusionScan TCGA_RNA-Seq ABCC1-MTCH1 ABCC1 chr16 16043656 + MTCH1 chr6 36945931 - Exonic hg19 STAD TCGA-D7-A6EX 2 In-Frame Inter-chr p21.2 14304 ChimerSeq FusionScan TCGA_RNA-Seq CCDC12-MAF CCDC12 chr3 46963725 - MAF chr16 79634622 - Exonic hg19 STAD TCGA-D7-A6EX 2 CDS-5'UTR Inter-chr p21.31 q23.2 Oncogene Transcription factor 14305 ChimerSeq FusionScan TCGA_RNA-Seq SAMD12-COL14A1 SAMD12 chr8 119634042 - COL14A1 chr8 121209029 + Exonic hg19 STAD TCGA-CG-4301 2 In-Frame Intra-chr q24.12 q24.12 Seq+ 14306 ChimerSeq FusionScan TCGA_RNA-Seq FAT1-DHX36 FAT1 chr4 187560875 - DHX36 chr3 154001060 - Exonic hg19 STAD TCGA-CG-4301 2 In-Frame Inter-chr q35.2 Tumor suppressor gene 14307 ChimerSeq FusionScan TCGA_RNA-Seq METTL9-LUC7L METTL9 chr16 21611219 + LUC7L chr16 258187 - Exonic hg19 STAD TCGA-CG-5723 2 In-Frame Intra-chr p13.3 14308 ChimerSeq FusionScan TCGA_RNA-Seq NCOA4-MAP3K8 NCOA4 chr10 51565296 + MAP3K8 chr10 30736710 + Exonic hg19 STAD TCGA-CG-5723 2 5'UTR-CDS Intra-chr q11.22 Oncogene Tumor suppressor gene p11.23 STE:STE11 Tumor suppressor gene 14309 ChimerSeq FusionScan TCGA_RNA-Seq ERCC8-CTSO ERCC8 chr5 60224690 - CTSO chr4 156847222 - Exonic hg19 STAD TCGA-CG-5723 2 Out-of-Frame Inter-chr q12.1 q32.1 14310 ChimerSeq FusionScan TCGA_RNA-Seq IL8-BCL6 IL8 chr4 74606439 + BCL6 chr3 187452695 - Exonic hg19 STAD TCGA-CG-5723 2 CDS-5'UTR Inter-chr q27.3 Oncogene Transcription factor 14311 ChimerSeq FusionScan TCGA_RNA-Seq PSMD8-FBL PSMD8 chr19 38865601 + FBL chr19 40328483 - Exonic hg19 STAD TCGA-CG-5723 2 In-Frame Intra-chr q13.2 14312 ChimerSeq FusionScan TCGA_RNA-Seq RRP36-FAM177A1 RRP36 chr6 42993067 + FAM177A1 chr14 35522483 + Exonic hg19 STAD TCGA-CG-5723 2 In-Frame Inter-chr p21.1 q13.2 14313 ChimerSeq FusionScan TCGA_RNA-Seq TCP1-HIF1A TCP1 chr6 160210436 - HIF1A chr14 62213651 + Exonic hg19 STAD TCGA-CG-5723 2 In-Frame Inter-chr q25.3 q23.2 Oncogene Tumor suppressor gene Transcription factor 14314 ChimerSeq FusionScan TCGA_RNA-Seq AGRN-NOC4L AGRN chr1 970704 + NOC4L chr12 132635525 + Exonic hg19 STAD TCGA-CG-5723 2 In-Frame Inter-chr p36.33 q24.33 Seq+ 14315 ChimerSeq FusionScan TCGA_RNA-Seq ACOT11-MTOR ACOT11 chr1 55065088 + MTOR chr1 11188609 - Exonic hg19 STAD TCGA-CG-5720 2 Out-of-Frame Intra-chr p32.3 p36.22 Oncogene 14316 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPF-ZIC5 HNRNPF chr10 43904578 - ZIC5 chr13 100618073 - Exonic hg19 STAD TCGA-CG-5720 2 5'UTR-CDS Inter-chr q11.21 q32.3 Transcription factor 14317 ChimerSeq FusionScan TCGA_RNA-Seq VPS35-GSPT1 VPS35 chr16 46723042 - GSPT1 chr16 11991892 - Exonic hg19 STAD TCGA-CG-5720 2 Out-of-Frame Intra-chr q11.2 p13.13 14318 ChimerSeq FusionScan TCGA_RNA-Seq ANPEP-LTBP4 ANPEP chr15 90348308 - LTBP4 chr19 41116437 + Exonic hg19 STAD TCGA-CG-5720 2 Out-of-Frame Inter-chr q26.1 q13.2 14319 ChimerSeq FusionScan TCGA_RNA-Seq MIA3-DENND1B MIA3 chr1 222806591 + DENND1B chr1 197742062 - Exonic hg19 STAD TCGA-3M-AB46 2 Out-of-Frame Intra-chr q41 q31.3 14320 ChimerSeq FusionScan TCGA_RNA-Seq PACS2-ABCB10 PACS2 chr14 105767316 + ABCB10 chr1 229685181 - Exonic hg19 STAD TCGA-3M-AB46 2 5'UTR-CDS Inter-chr q32.33 q42.13 14321 ChimerSeq FusionScan TCGA_RNA-Seq CACYBP-RABGAP1L CACYBP chr1 174976333 + RABGAP1L chr1 174957777 + Exonic hg19 STAD TCGA-VQ-A8PC 7 In-Frame Intra-chr q25.1 q25.1 Seq+ 14322 ChimerSeq FusionScan TCGA_RNA-Seq CACYBP-RABGAP1L CACYBP chr1 174976333 + RABGAP1L chr1 174958985 + Exonic hg19 STAD TCGA-VQ-A8PC 3 In-Frame Intra-chr q25.1 q25.1 Seq+ 14323 ChimerSeq FusionScan TCGA_RNA-Seq NR3C2-ARHGAP10 NR3C2 chr4 149035254 - ARHGAP10 chr4 148860975 + Exonic hg19 STAD TCGA-VQ-A8PC 2 Out-of-Frame Intra-chr q31.23 Transcription factor q31.23 14324 ChimerSeq FusionScan TCGA_RNA-Seq RNF213-TMEM45B RNF213 chr17 78237577 + TMEM45B chr11 129728468 + Exonic hg19 STAD TCGA-HU-8238 3 Out-of-Frame Inter-chr q25.3 Oncogene q24.3 Seq+ 14325 ChimerSeq FusionScan TCGA_RNA-Seq ACACA-CYB5A ACACA chr17 35687112 - CYB5A chr18 71930712 - Exonic hg19 STAD TCGA-HU-8238 2 Out-of-Frame Inter-chr q22.3 Tumor suppressor gene Seq+ 14326 ChimerSeq FusionScan TCGA_RNA-Seq IKZF5-HNRNPA2B1 IKZF5 chr10 124768209 - HNRNPA2B1 chr7 26237352 - Exonic hg19 STAD TCGA-HU-8238 2 5'UTR-CDS Inter-chr q26.13 Transcription factor p15.2 Seq+ 14327 ChimerSeq FusionScan TCGA_RNA-Seq IGLL5-WIPF2 IGLL5 chr22 23230439 + WIPF2 chr17 38430041 + Exonic hg19 STAD TCGA-HU-8238 2 In-Frame Inter-chr q11.22 q21.2 Seq+ 14328 ChimerSeq FusionScan TCGA_RNA-Seq CLINT1-MIA3 CLINT1 chr5 157218710 - MIA3 chr1 222837339 + Exonic hg19 STAD TCGA-HU-8238 2 In-Frame Inter-chr q33.3 q41 Seq+ 14329 ChimerSeq FusionScan TCGA_RNA-Seq SAR1A-FAM156A SAR1A chr10 71930168 - FAM156A chrX 52985544 - Exonic hg19 STAD TCGA-HU-8238 2 5'UTR-5'UTR Inter-chr q22.1 p11.22 Seq+ 14330 ChimerSeq FusionScan TCGA_RNA-Seq SLC22A4-SEPT8 SLC22A4 chr5 131630702 + SEPT8 chr5 132101221 - Exonic hg19 STAD TCGA-HU-8238 2 In-Frame Intra-chr q31.1 q31.1 Seq+ 14331 ChimerSeq FusionScan TCGA_RNA-Seq GAS5-TSPAN3 GAS5 chr1 173836128 - TSPAN3 chr15 77348597 - Exonic hg19 STAD TCGA-HU-8238 2 3'UTR-CDS Inter-chr q25.1 Tumor suppressor gene q24.3 14332 ChimerSeq FusionScan TCGA_RNA-Seq CDKL1-IKZF3 CDKL1 chr14 50825745 - IKZF3 chr17 37934020 - Exonic hg19 STAD TCGA-BR-7196 2 Out-of-Frame Inter-chr q22.1 CMGC:CDKL q21.1 Tumor suppressor gene Transcription factor 14333 ChimerSeq FusionScan TCGA_RNA-Seq PPFIA1-ANO1 PPFIA1 chr11 70118542 + ANO1 chr11 70007266 + Exonic hg19 STAD TCGA-VQ-AA6G 17 In-Frame Intra-chr q13.3 q13.3 Seq+ 14334 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-MIEN1 ERBB2 chr17 37876087 + MIEN1 chr17 37886544 - Exonic hg19 STAD TCGA-VQ-AA6G 7 In-Frame Intra-chr q12 Oncogene q12 14335 ChimerSeq FusionScan TCGA_RNA-Seq FMR1-MTM1 FMR1 chrX 146993748 + MTM1 chrX 149826293 + Exonic hg19 STAD TCGA-VQ-AA6G 2 In-Frame Intra-chr q27.3 q28 14336 ChimerSeq FusionScan TCGA_RNA-Seq WTAP-DSCR3 WTAP chr6 160148365 + DSCR3 chr21 38612940 - Exonic hg19 STAD TCGA-VQ-AA6G 2 5'UTR-CDS Inter-chr q25.3 q22.13 14337 ChimerSeq FusionScan TCGA_RNA-Seq CBX4-ANXA2 CBX4 chr17 77812809 - ANXA2 chr15 60639888 - Exonic hg19 STAD TCGA-VQ-AA6G 2 Out-of-Frame Inter-chr q25.3 q22.2 14338 ChimerSeq FusionScan TCGA_RNA-Seq RNF19A-NPRL3 RNF19A chr8 101322094 - NPRL3 chr16 180590 - Exonic hg19 STAD TCGA-VQ-AA6G 2 5'UTR-5'UTR Inter-chr q22.2 p13.3 14339 ChimerSeq FusionScan TCGA_RNA-Seq MED24-STAC2 MED24 chr17 38209550 - STAC2 chr17 37369385 - Exonic hg19 STAD TCGA-VQ-AA6G 2 In-Frame Intra-chr q21.1 q12 Seq+ 14340 ChimerSeq FusionScan TCGA_RNA-Seq GEN1-SETD8 GEN1 chr2 17935234 + SETD8 chr12 123879593 + Exonic hg19 STAD TCGA-HU-A4GT 2 5'UTR-CDS Inter-chr p24.2 Seq+ 14341 ChimerSeq FusionScan TCGA_RNA-Seq LRPPRC-ATP5C1 LRPPRC chr2 44222937 - ATP5C1 chr10 7848936 + Exonic hg19 STAD TCGA-HU-A4GT 2 In-Frame Inter-chr p21 p14 Seq+ 14342 ChimerSeq FusionScan TCGA_RNA-Seq SEC23B-RCC2 SEC23B chr20 18492926 + RCC2 chr1 17739674 - Exonic hg19 STAD TCGA-HU-A4GT 2 Out-of-Frame Inter-chr p11.23 Seq+ 14343 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-CRABP2 RCC1 chr1 28834672 + CRABP2 chr1 156675338 - Exonic hg19 STAD TCGA-HU-A4GT 2 5'UTR-5'UTR Intra-chr p35.3 q23.1 Seq+ 14344 ChimerSeq FusionScan TCGA_RNA-Seq HIPK2-TBXAS1 HIPK2 chr7 139477403 - TBXAS1 chr7 139706890 + Exonic hg19 STAD TCGA-HU-A4GT 2 Out-of-Frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Seq+ 14345 ChimerSeq FusionScan TCGA_RNA-Seq CADPS2-IQUB CADPS2 chr7 122269301 - IQUB chr7 123152398 - Exonic hg19 STAD TCGA-HU-A4GT 2 CDS-5'UTR Intra-chr q31.32 q31.32 14346 ChimerSeq FusionScan TCGA_RNA-Seq TTC17-SAAL1 TTC17 chr11 43380663 + SAAL1 chr11 18118401 - Exonic hg19 STAD TCGA-HU-A4GT 2 In-Frame Intra-chr p12 p15.1 14347 ChimerSeq FusionScan TCGA_RNA-Seq MED1-MLLT10 MED1 chr17 37595417 - MLLT10 chr10 21827761 + Exonic hg19 STAD TCGA-HU-A4GT 2 Out-of-Frame Inter-chr q12 Tumor suppressor gene p12.31 Oncogene 14348 ChimerSeq FusionScan TCGA_RNA-Seq TMEM45B-PPRC1 TMEM45B chr11 129685793 + PPRC1 chr10 103906428 + Exonic hg19 STAD TCGA-HU-A4GT 2 5'UTR-CDS Inter-chr q24.3 q24.32 14349 ChimerSeq FusionScan TCGA_RNA-Seq ZDHHC17-UBC ZDHHC17 chr12 77158109 + UBC chr12 125398320 - Exonic hg19 STAD TCGA-HU-A4GT 2 CDS-5'UTR Intra-chr q21.2 q24.31 Seq+ 14350 ChimerSeq FusionScan TCGA_RNA-Seq RORA-ANXA2 RORA chr15 60884585 - ANXA2 chr15 60678285 - Exonic hg19 STAD TCGA-VQ-A8P3 14 In-Frame Intra-chr q22.2 Transcription factor q22.2 Seq+ 14351 ChimerSeq FusionScan TCGA_RNA-Seq TRMU-GRAMD4 TRMU chr22 46742441 + GRAMD4 chr22 47054083 + Exonic hg19 STAD TCGA-VQ-A8P3 12 In-Frame Intra-chr q13.31 q13.31 Seq+ 14352 ChimerSeq FusionScan TCGA_RNA-Seq KARS-CFDP1 KARS chr16 75665065 - CFDP1 chr16 75327940 - Exonic hg19 STAD TCGA-VQ-A8P3 7 Out-of-Frame Intra-chr q23.1 q23.1 Seq+ 14353 ChimerSeq FusionScan TCGA_RNA-Seq C12orf32-TEAD4 C12orf32 chr12 2986448 + TEAD4 chr12 3147133 + Exonic hg19 STAD TCGA-VQ-A8P3 7 5'UTR-CDS Intra-chr p13.33 Transcription factor 14354 ChimerSeq FusionScan TCGA_RNA-Seq TNFRSF12A-ZNF205 TNFRSF12A chr16 3070492 + ZNF205 chr16 3163417 + Exonic hg19 STAD TCGA-VQ-A8P3 6 CDS-5'UTR Intra-chr p13.3 Tumor suppressor gene p13.3 Transcription factor 14355 ChimerSeq FusionScan TCGA_RNA-Seq CLPTM1-CBLC CLPTM1 chr19 45465332 + CBLC chr19 45293260 + Exonic hg19 STAD TCGA-VQ-A8P3 5 In-Frame Intra-chr q13.32 q13.32 Seq+ 14356 ChimerSeq FusionScan TCGA_RNA-Seq CWC15-HP1BP3 CWC15 chr11 94705218 - HP1BP3 chr1 21100103 - Exonic hg19 STAD TCGA-VQ-A8P3 2 In-Frame Inter-chr q21 p36.12 14357 ChimerSeq FusionScan TCGA_RNA-Seq MYO1E-SLTM MYO1E chr15 59464095 - SLTM chr15 59186781 - Exonic hg19 STAD TCGA-VQ-A8P3 2 Out-of-Frame Intra-chr q22.2 q22.1 Seq+ 14358 ChimerSeq FusionScan TCGA_RNA-Seq IP6K2-RHOA IP6K2 chr3 48754589 - RHOA chr3 49413024 - Exonic hg19 STAD TCGA-VQ-A925 18 5'UTR-5'UTR Intra-chr p21.31 p21.31 Oncogene Tumor suppressor gene Seq+ 14359 ChimerSeq FusionScan TCGA_RNA-Seq VGLL4-TMEM40 VGLL4 chr3 11744444 - TMEM40 chr3 12791339 - Exonic hg19 STAD TCGA-VQ-A925 16 CDS-5'UTR Intra-chr p25.2 p25.2 Seq+ 14360 ChimerSeq FusionScan TCGA_RNA-Seq NCK2-MRPS9 NCK2 chr2 106361595 + MRPS9 chr2 105705441 + Exonic hg19 STAD TCGA-VQ-A925 11 5'UTR-CDS Intra-chr q12.2 q12.1 Seq+ 14361 ChimerSeq FusionScan TCGA_RNA-Seq SEL1L3-CCKAR SEL1L3 chr4 25759155 - CCKAR chr4 26484905 - Exonic hg19 STAD TCGA-VQ-A925 8 Out-of-Frame Intra-chr p15.2 p15.2 Seq+ 14362 ChimerSeq FusionScan TCGA_RNA-Seq SRPK1-CCND3 SRPK1 chr6 35888244 - CCND3 chr6 41908323 - Exonic hg19 STAD TCGA-VQ-A925 6 Out-of-Frame Intra-chr p21.31 CMGC:SRPK p21.1 Seq+ 14363 ChimerSeq FusionScan TCGA_RNA-Seq SSH2-SLC6A4 SSH2 chr17 28120911 - SLC6A4 chr17 28549933 - Exonic hg19 STAD TCGA-VQ-A925 6 CDS-3'UTR Intra-chr q11.2 q11.2 Seq+ 14364 ChimerSeq FusionScan TCGA_RNA-Seq EHBP1-COMMD1 EHBP1 chr2 62974587 + COMMD1 chr2 62227835 + Exonic hg19 STAD TCGA-VQ-A925 6 In-Frame Intra-chr p15 p15 Seq+ 14365 ChimerSeq FusionScan TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104654982 + LHFPL3 chr7 104377121 + Exonic hg19 STAD TCGA-VQ-A925 5 5'UTR-CDS Intra-chr q22.2 Seq+ 14366 ChimerSeq FusionScan TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105365554 - OBFC1 chr10 105670380 - Exonic hg19 STAD TCGA-VQ-A925 5 Out-of-Frame Intra-chr q24.33 Seq+ 14367 ChimerSeq FusionScan TCGA_RNA-Seq FBXO25-ING5 FBXO25 chr8 363213 + ING5 chr2 242651392 + Exonic hg19 STAD TCGA-VQ-A925 4 Out-of-Frame Inter-chr p23.3 Tumor suppressor gene q37.3 Tumor suppressor gene 14368 ChimerSeq FusionScan TCGA_RNA-Seq SUZ12-EFCAB5 SUZ12 chr17 30303633 + EFCAB5 chr17 28378135 + Exonic hg19 STAD TCGA-VQ-A925 4 Out-of-Frame Intra-chr q11.2 Tumor suppressor gene q11.2 14369 ChimerSeq FusionScan TCGA_RNA-Seq EPB41L1-PHF20 EPB41L1 chr20 34700402 + PHF20 chr20 34430494 + Exonic hg19 STAD TCGA-VQ-A925 4 5'UTR-CDS Intra-chr q11.23 q11.22 Transcription factor Seq+ 14370 ChimerSeq FusionScan TCGA_RNA-Seq IP6K2-RHOA IP6K2 chr3 48752747 - RHOA chr3 49413024 - Exonic hg19 STAD TCGA-VQ-A925 3 CDS-5'UTR Intra-chr p21.31 p21.31 Oncogene Tumor suppressor gene Seq+ 14371 ChimerSeq FusionScan TCGA_RNA-Seq MARK3-CDC42BPB MARK3 chr14 103958371 + CDC42BPB chr14 103478525 - Exonic hg19 STAD TCGA-VQ-A925 3 Out-of-Frame Intra-chr q32.32 CAMK:CAMKL q32.32 14372 ChimerSeq FusionScan TCGA_RNA-Seq OBFC1-COL17A1 OBFC1 chr10 105648829 - COL17A1 chr10 105795321 - Exonic hg19 STAD TCGA-VQ-A925 3 In-Frame Intra-chr q25.1 Seq+ 14373 ChimerSeq FusionScan TCGA_RNA-Seq ACOT7-PLEKHG5 ACOT7 chr1 6341161 - PLEKHG5 chr1 6556629 - Exonic hg19 STAD TCGA-VQ-A925 3 Out-of-Frame Intra-chr p36.31 p36.31 Oncogene Seq+ 14374 ChimerSeq FusionScan TCGA_RNA-Seq SMAD3-MAP2K5 SMAD3 chr15 67358698 + MAP2K5 chr15 67879183 + Exonic hg19 STAD TCGA-VQ-A925 3 Out-of-Frame Intra-chr q22.33 Transcription factor q23 STE:STE7 Seq+ 14375 ChimerSeq FusionScan TCGA_RNA-Seq UNC5CL-TFEB UNC5CL chr6 41006900 - TFEB chr6 41658973 - Exonic hg19 STAD TCGA-VQ-A925 3 5'UTR-5'UTR Intra-chr p21.1 p21.1 Transcription factor 14376 ChimerSeq FusionScan TCGA_RNA-Seq ZFAT-NDRG1 ZFAT chr8 135725087 - NDRG1 chr8 134296572 - Exonic hg19 STAD TCGA-VQ-A925 2 CDS-5'UTR Intra-chr q24.22 Transcription factor q24.22 Tumor suppressor gene 14377 ChimerSeq FusionScan TCGA_RNA-Seq ABR-MYO1C ABR chr17 953289 - MYO1C chr17 1387597 - Exonic hg19 STAD TCGA-VQ-A925 2 In-Frame Intra-chr p13.3 p13.3 14378 ChimerSeq FusionScan TCGA_RNA-Seq ZFP90-NFATC3 ZFP90 chr16 68573728 + NFATC3 chr16 68260252 + Exonic hg19 STAD TCGA-VQ-A925 2 In-Frame Intra-chr q22.1 Transcription factor q22.1 Transcription factor Seq+ 14379 ChimerSeq FusionScan TCGA_RNA-Seq SRPK1-CCND3 SRPK1 chr6 35888244 - CCND3 chr6 41905132 - Exonic hg19 STAD TCGA-VQ-A925 2 Out-of-Frame Intra-chr p21.31 CMGC:SRPK p21.1 Seq+ 14380 ChimerSeq FusionScan TCGA_RNA-Seq CIRH1A-WWP2 CIRH1A chr16 69184807 + WWP2 chr16 69963350 + Exonic hg19 STAD TCGA-VQ-A925 2 Out-of-Frame Intra-chr q22.1 14381 ChimerSeq FusionScan TCGA_RNA-Seq VPS13D-ACSS2 VPS13D chr1 12429757 + ACSS2 chr20 33511125 + Exonic hg19 STAD TCGA-VQ-A925 2 Out-of-Frame Inter-chr p36.22 q11.22 14382 ChimerSeq FusionScan TCGA_RNA-Seq AK2-MKL1 AK2 chr1 33502336 - MKL1 chr22 40859290 - Exonic hg19 STAD TCGA-VQ-A925 2 CDS-5'UTR Inter-chr p35.1 q13.2 Seq+ 14383 ChimerSeq FusionScan TCGA_RNA-Seq DNMT3A-KIF3C DNMT3A chr2 25536781 - KIF3C chr2 26152932 - Exonic hg19 STAD TCGA-VQ-A925 2 Out-of-Frame Intra-chr p23.3 Oncogene Tumor suppressor gene p23.3 14384 ChimerSeq FusionScan TCGA_RNA-Seq ATP13A1-MYH11 ATP13A1 chr19 19770409 - MYH11 chr16 15802698 - Exonic hg19 STAD TCGA-CD-A489 2 In-Frame Inter-chr p13.11 Oncogene 14385 ChimerSeq FusionScan TCGA_RNA-Seq TPP2-METTL21CP1 TPP2 chr13 103309557 + METTL21CP1 chr13 103533437 + Exonic hg19 STAD TCGA-CD-A489 2 CDS-5'UTR Intra-chr q33.1 14386 ChimerSeq FusionScan TCGA_RNA-Seq POU2F1-CD46 POU2F1 chr1 167301772 + CD46 chr1 207930358 + Exonic hg19 STAD TCGA-CD-A489 2 In-Frame Intra-chr q24.2 Transcription factor q32.2 14387 ChimerSeq FusionScan TCGA_RNA-Seq PNN-PSMA3 PNN chr14 39645799 + PSMA3 chr14 58738568 + Exonic hg19 STAD TCGA-CD-A489 2 Out-of-Frame Intra-chr q21.1 Tumor suppressor gene q23.1 14388 ChimerSeq FusionScan TCGA_RNA-Seq TMPRSS4-TMEM25 TMPRSS4 chr11 117975535 + TMEM25 chr11 118404571 + Exonic hg19 STAD TCGA-D7-8579 12 Out-of-Frame Intra-chr q23.3 q23.3 Seq+ 14389 ChimerSeq FusionScan TCGA_RNA-Seq PTPRN2-IMMP2L PTPRN2 chr7 158380249 - IMMP2L chr7 111161505 - Exonic hg19 STAD TCGA-D7-8579 4 CDS-5'UTR Intra-chr q36.3 q31.1 Seq+ 14390 ChimerSeq FusionScan TCGA_RNA-Seq SULT1A2-FBXL19 SULT1A2 chr16 28608317 - FBXL19 chr16 30941393 + Exonic hg19 STAD TCGA-D7-8579 3 5'UTR-CDS Intra-chr p11.2 p11.2 Transcription factor 14391 ChimerSeq FusionScan TCGA_RNA-Seq NFIC-C9orf3 NFIC chr19 3382241 + C9orf3 chr9 97848963 + Exonic hg19 STAD TCGA-D7-8579 2 CDS-3'UTR Inter-chr p13.3 Transcription factor q22.32 14392 ChimerSeq FusionScan TCGA_RNA-Seq PFKFB3-ZCCHC2 PFKFB3 chr10 6268328 + ZCCHC2 chr18 60209730 + Exonic hg19 STAD TCGA-D7-8579 2 Out-of-Frame Inter-chr p15.1 q21.33 14393 ChimerSeq FusionScan TCGA_RNA-Seq PANK3-RARS PANK3 chr5 167986036 - RARS chr5 167920898 + Exonic hg19 STAD TCGA-D7-8579 2 In-Frame Intra-chr q34 q34 14394 ChimerSeq FusionScan TCGA_RNA-Seq NUP153-ZNF280D NUP153 chr6 17706507 - ZNF280D chr15 56985413 - Exonic hg19 STAD TCGA-D7-8579 2 In-Frame Inter-chr p22.3 q21.3 Transcription factor Seq+ 14395 ChimerSeq FusionScan TCGA_RNA-Seq STK17A-ERC1 STK17A chr7 43623048 + ERC1 chr12 1345934 + Exonic hg19 STAD TCGA-D7-8579 2 In-Frame Inter-chr p13 14396 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D5-RWDD1 TBC1D5 chr3 17783972 - RWDD1 chr6 116914142 + Exonic hg19 STAD TCGA-D7-8579 2 5'UTR-CDS Inter-chr p24.3 q22.1 14397 ChimerSeq FusionScan TCGA_RNA-Seq ATF6-MNDA ATF6 chr1 161789608 + MNDA chr1 158815376 + Exonic hg19 STAD TCGA-BR-8371 2 In-Frame Intra-chr q23.3 Transcription factor q23.1 14398 ChimerSeq FusionScan TCGA_RNA-Seq ANXA7-FAM149B1 ANXA7 chr10 75173769 - FAM149B1 chr10 74952313 + Exonic hg19 STAD TCGA-BR-8371 2 5'UTR-CDS Intra-chr q22.2 Tumor suppressor gene q22.2 14399 ChimerSeq FusionScan TCGA_RNA-Seq SEPT7P2-PSPH SEPT7P2 chr7 45808258 - PSPH chr7 56088924 - Exonic hg19 STAD TCGA-HU-A4G9 11 3'UTR-5'UTR Intra-chr p12.3 p11.2 Seq+ 14400 ChimerSeq FusionScan TCGA_RNA-Seq DEPDC1B-NDUFAF2 DEPDC1B chr5 59982788 - NDUFAF2 chr5 60368951 + Exonic hg19 STAD TCGA-HU-A4G9 2 Out-of-Frame Intra-chr q12.1 q12.1 14401 ChimerSeq FusionScan TCGA_RNA-Seq MAP4-SCAP MAP4 chr3 48130262 - SCAP chr3 47484581 - Exonic hg19 STAD TCGA-HU-A4G9 2 5'UTR-5'UTR Intra-chr p21.31 p21.31 14402 ChimerSeq FusionScan TCGA_RNA-Seq ITGA6-RAPGEF4 ITGA6 chr2 173356251 + RAPGEF4 chr2 173898641 + Exonic hg19 STAD TCGA-D7-A4YY 17 In-Frame Intra-chr q31.1 q31.1 Seq+ 14403 ChimerSeq FusionScan TCGA_RNA-Seq AP1M2-FBXL12 AP1M2 chr19 10689567 - FBXL12 chr19 9922393 - Exonic hg19 STAD TCGA-D7-A4YY 11 In-Frame Intra-chr p13.2 p13.2 Seq+ 14404 ChimerSeq FusionScan TCGA_RNA-Seq DENND5B-FAM60A DENND5B chr12 31743639 - FAM60A chr12 31451158 - Exonic hg19 STAD TCGA-D7-A4YY 6 CDS-5'UTR Intra-chr p11.21 Seq+ 14405 ChimerSeq FusionScan TCGA_RNA-Seq BAIAP2-RPTOR BAIAP2 chr17 79031767 + RPTOR chr17 78882610 + Exonic hg19 STAD TCGA-D7-A4YY 6 In-Frame Intra-chr q25.3 q25.3 Seq+ 14406 ChimerSeq FusionScan TCGA_RNA-Seq PRIM2-COL22A1 PRIM2 chr6 57190843 + COL22A1 chr8 139749820 - Exonic hg19 STAD TCGA-D7-A4YY 4 In-Frame Inter-chr p11.2 q24.3 Seq+ 14407 ChimerSeq FusionScan TCGA_RNA-Seq GPR107-FUBP3 GPR107 chr9 132869818 + FUBP3 chr9 133470869 + Exonic hg19 STAD TCGA-D7-A4YY 3 Out-of-Frame Intra-chr q34.11 q34.11 14408 ChimerSeq FusionScan TCGA_RNA-Seq TXNDC16-NID2 TXNDC16 chr14 53010115 - NID2 chr14 52521039 - Exonic hg19 STAD TCGA-D7-A4YY 3 Out-of-Frame Intra-chr q22.1 q22.1 14409 ChimerSeq FusionScan TCGA_RNA-Seq DIP2C-SDF4 DIP2C chr10 735433 - SDF4 chr1 1154307 - Exonic hg19 STAD TCGA-D7-A4YY 2 In-Frame Inter-chr p15.3 p36.33 14410 ChimerSeq FusionScan TCGA_RNA-Seq XRCC6-SREBF2 XRCC6 chr22 42033795 + SREBF2 chr22 42262834 + Exonic hg19 STAD TCGA-D7-A4YY 2 Out-of-Frame Intra-chr q13.2 q13.2 Transcription factor Seq+ 14411 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-RABGAP1L RCC1 chr1 28832596 + RABGAP1L chr1 174606512 + Exonic hg19 STAD TCGA-D7-A4YY 2 5'UTR-CDS Intra-chr p35.3 q25.1 14412 ChimerSeq FusionScan TCGA_RNA-Seq VPS53-GLOD4 VPS53 chr17 526772 - GLOD4 chr17 681984 - Exonic hg19 STAD TCGA-D7-A4YY 2 In-Frame Intra-chr Tumor suppressor gene p13.3 Seq+ 14413 ChimerSeq FusionScan TCGA_RNA-Seq BRMS1L-GALNTL1 BRMS1L chr14 36304129 + GALNTL1 chr14 69798180 + Exonic hg19 STAD TCGA-D7-A4YY 2 In-Frame Intra-chr q13.2 14414 ChimerSeq FusionScan TCGA_RNA-Seq FAT1-ELF2 FAT1 chr4 187627716 - ELF2 chr4 139994721 - Exonic hg19 STAD TCGA-D7-A4YY 2 In-Frame Intra-chr q35.2 Tumor suppressor gene q31.1 Transcription factor 14415 ChimerSeq FusionScan TCGA_RNA-Seq DPYD-CCBL2 DPYD chr1 98144650 - CCBL2 chr1 89435150 - Exonic hg19 STAD TCGA-D7-A4YY 2 Out-of-Frame Intra-chr p21.3 Oncogene 14416 ChimerSeq FusionScan TCGA_RNA-Seq EIF2C2-TRAPPC9 EIF2C2 chr8 141645583 - TRAPPC9 chr8 141461482 - Exonic hg19 STAD TCGA-BR-8485 5 Out-of-Frame Intra-chr q24.3 14417 ChimerSeq FusionScan TCGA_RNA-Seq PNPLA2-EPS8L2 PNPLA2 chr11 822606 + EPS8L2 chr11 720061 + Exonic hg19 STAD TCGA-BR-8485 5 In-Frame Intra-chr p15.5 p15.5 Seq+ 14418 ChimerSeq FusionScan TCGA_RNA-Seq PTK2-TRAPPC9 PTK2 chr8 142011223 - TRAPPC9 chr8 141461482 - Exonic hg19 STAD TCGA-BR-8485 3 5'UTR-5'UTR Intra-chr q24.3 q24.3 Seq+ 14419 ChimerSeq FusionScan TCGA_RNA-Seq SLCO4A1-CABLES2 SLCO4A1 chr20 61273905 + CABLES2 chr20 60971648 - Exonic hg19 STAD TCGA-BR-8485 3 5'UTR-CDS Intra-chr q13.33 q13.33 14420 ChimerSeq FusionScan TCGA_RNA-Seq TARDBP-IMMP2L TARDBP chr1 11074022 + IMMP2L chr7 111201979 - Exonic hg19 STAD TCGA-BR-8485 2 CDS-5'UTR Inter-chr p36.22 q31.1 14421 ChimerSeq FusionScan TCGA_RNA-Seq ZP3-C7orf73 ZP3 chr7 76063472 + C7orf73 chr7 135357500 + Exonic hg19 STAD TCGA-BR-8485 2 In-Frame Intra-chr q11.23 q33 14422 ChimerSeq FusionScan TCGA_RNA-Seq TPD52-ZNF704 TPD52 chr8 81083659 - ZNF704 chr8 81555364 - Exonic hg19 STAD TCGA-BR-8485 2 Out-of-Frame Intra-chr q21.13 q21.13 Transcription factor Seq+ 14423 ChimerSeq FusionScan TCGA_RNA-Seq ACO2-MAP1S ACO2 chr22 41865186 + MAP1S chr19 17844001 + Exonic hg19 STAD TCGA-BR-8485 2 5'UTR-CDS Inter-chr q13.2 p13.11 14424 ChimerSeq FusionScan TCGA_RNA-Seq NCK2-ZNF638 NCK2 chr2 106471745 + ZNF638 chr2 71645731 + Exonic hg19 STAD TCGA-BR-8485 2 Out-of-Frame Intra-chr q12.2 p13.3 14425 ChimerSeq FusionScan TCGA_RNA-Seq TGFB1-TBC1D16 TGFB1 chr19 41847787 - TBC1D16 chr17 77926617 - Exonic hg19 STAD TCGA-BR-8485 2 In-Frame Inter-chr q13.2 Tumor suppressor gene q25.3 14426 ChimerSeq FusionScan TCGA_RNA-Seq FLNB-YY1AP1 FLNB chr3 57994583 + YY1AP1 chr1 155631214 - Exonic hg19 STAD TCGA-BR-8485 2 Out-of-Frame Inter-chr p14.3 q22 14427 ChimerSeq FusionScan TCGA_RNA-Seq RLTPR-ACD RLTPR chr16 67691472 + ACD chr16 67691717 - Exonic hg19 STAD TCGA-BR-8485 2 3'UTR-CDS Intra-chr q22.1 14428 ChimerSeq FusionScan TCGA_RNA-Seq ZNF107-YWHAB ZNF107 chr7 64139714 + YWHAB chr20 43530171 + Exonic hg19 STAD TCGA-BR-8485 2 5'UTR-5'UTR Inter-chr q11.21 Transcription factor q13.12 14429 ChimerSeq FusionScan TCGA_RNA-Seq APBB2-MYEF2 APBB2 chr4 41145003 - MYEF2 chr15 48435268 - Exonic hg19 STAD TCGA-BR-8485 2 5'UTR-CDS Inter-chr p13 q21.1 14430 ChimerSeq FusionScan TCGA_RNA-Seq CAB39-GBF1 CAB39 chr2 231577945 + GBF1 chr10 104125153 + Exonic hg19 STAD TCGA-BR-8485 2 5'UTR-CDS Inter-chr q37.1 q24.32 Seq+ 14431 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57733388 + VMP1 chr17 57915655 + Exonic hg19 STAD TCGA-RD-A8N6 12 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 14432 ChimerSeq FusionScan TCGA_RNA-Seq CTDSPL2-EIF3J CTDSPL2 chr15 44751398 + EIF3J chr15 44843073 + Exonic hg19 STAD TCGA-RD-A8N6 6 In-Frame Intra-chr q15.3 q21.1 14433 ChimerSeq FusionScan TCGA_RNA-Seq IP6K2-YWHAE IP6K2 chr3 48754589 - YWHAE chr17 1268352 - Exonic hg19 STAD TCGA-RD-A8N6 4 5'UTR-CDS Inter-chr p21.31 p13.3 14434 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 STAD TCGA-RD-A8N6 3 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 14435 ChimerSeq FusionScan TCGA_RNA-Seq CDK6-ANKIB1 CDK6 chr7 92462404 - ANKIB1 chr7 91936672 + Exonic hg19 STAD TCGA-RD-A8N6 3 In-Frame Intra-chr q21.2 CMGC:CDK Oncogene Tumor suppressor gene q21.2 Seq+ 14436 ChimerSeq FusionScan TCGA_RNA-Seq TSG101-MICAL2 TSG101 chr11 18536224 - MICAL2 chr11 12237765 + Exonic hg19 STAD TCGA-RD-A8N6 2 Out-of-Frame Intra-chr p15.1 Tumor suppressor gene p15.3 14437 ChimerSeq FusionScan TCGA_RNA-Seq IGF1R-KLHL18 IGF1R chr15 99192904 + KLHL18 chr3 47361142 + Exonic hg19 STAD TCGA-RD-A8N6 2 Out-of-Frame Inter-chr q26.3 TK:InsR Oncogene p21.31 14438 ChimerSeq FusionScan TCGA_RNA-Seq BCL2L2-SDF2 BCL2L2 chr14 23777408 + SDF2 chr17 26982501 - Exonic hg19 STAD TCGA-RD-A8N6 2 Out-of-Frame Inter-chr q11.2 Oncogene q11.2 14439 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175394270 - Exonic hg19 STAD TCGA-RD-A8N6 2 5'UTR-CDS Inter-chr q21.1 q35.2 14440 ChimerSeq FusionScan TCGA_RNA-Seq C5orf44-NLN C5orf44 chr5 64960211 + NLN chr5 65105341 + Exonic hg19 STAD TCGA-RD-A8N6 2 In-Frame Intra-chr q12.3 14441 ChimerSeq FusionScan TCGA_RNA-Seq IP6K2-YWHAE IP6K2 chr3 48754589 - YWHAE chr17 1273035 - Exonic hg19 STAD TCGA-RD-A8N6 2 3'UTR-3'UTR Inter-chr p21.31 p13.3 14442 ChimerSeq FusionScan TCGA_RNA-Seq PTMA-GNA11 PTMA chr2 232573461 + GNA11 chr19 3118921 + Exonic hg19 STAD TCGA-RD-A8N6 2 Out-of-Frame Inter-chr q37.1 p13.3 Oncogene 14443 ChimerSeq FusionScan TCGA_RNA-Seq ABHD12-NUDCD3 ABHD12 chr20 25371148 - NUDCD3 chr7 44432084 - Exonic hg19 STAD TCGA-RD-A8N6 2 Out-of-Frame Inter-chr p11.21 p13 14444 ChimerSeq FusionScan TCGA_RNA-Seq CNPY2-SYMPK CNPY2 chr12 56708634 - SYMPK chr19 46357765 - Exonic hg19 STAD TCGA-BR-8682 2 CDS-5'UTR Inter-chr q13.3 q13.32 14445 ChimerSeq FusionScan TCGA_RNA-Seq MRPL9-RBM5 MRPL9 chr1 151733291 - RBM5 chr3 50150815 + Exonic hg19 STAD TCGA-RD-A8N9 2 In-Frame Inter-chr q21.3 p21.31 Tumor suppressor gene 14446 ChimerSeq FusionScan TCGA_RNA-Seq HDAC11-FBLN2 HDAC11 chr3 13522894 + FBLN2 chr3 13611814 + Exonic hg19 STAD TCGA-RD-A8N9 2 CDS-5'UTR Intra-chr p25.1 p25.1 14447 ChimerSeq FusionScan TCGA_RNA-Seq GSK3B-SMAP1 GSK3B chr3 119720892 - SMAP1 chr6 71508359 + Exonic hg19 STAD TCGA-RD-A8N9 2 In-Frame Inter-chr q13.33 CMGC:GSK Tumor suppressor gene q13 14448 ChimerSeq FusionScan TCGA_RNA-Seq FAM120A-C9orf89 FAM120A chr9 96214671 + C9orf89 chr9 95875273 + Exonic hg19 STAD TCGA-BR-8289 17 Out-of-Frame Intra-chr q22.31 Seq+ 14449 ChimerSeq FusionScan TCGA_RNA-Seq WIPF2-PSMD3 WIPF2 chr17 38375744 + PSMD3 chr17 38144935 + Exonic hg19 STAD TCGA-BR-8289 15 5'UTR-CDS Intra-chr q21.2 q21.1 Seq+ 14450 ChimerSeq FusionScan TCGA_RNA-Seq KDM2A-SYT12 KDM2A chr11 66888829 + SYT12 chr11 66797592 + Exonic hg19 STAD TCGA-BR-8289 13 5'UTR-5'UTR Intra-chr q13.2 Transcription factor q13.2 Seq+ 14451 ChimerSeq FusionScan TCGA_RNA-Seq ATP1A1-IGSF3 ATP1A1 chr1 116946597 + IGSF3 chr1 117122499 - Exonic hg19 STAD TCGA-BR-8289 13 In-Frame Intra-chr p13.1 p13.1 Seq+ 14452 ChimerSeq FusionScan TCGA_RNA-Seq CBFA2T2-ACOX1 CBFA2T2 chr20 32078107 + ACOX1 chr17 73953647 - Exonic hg19 STAD TCGA-BR-8289 11 In-Frame Inter-chr q11.21 q25.1 Seq+ 14453 ChimerSeq FusionScan TCGA_RNA-Seq RAB1A-C7orf50 RAB1A chr2 65357026 - C7orf50 chr7 1040187 - Exonic hg19 STAD TCGA-BR-8289 10 In-Frame Inter-chr p14 p22.3 Seq+ 14454 ChimerSeq FusionScan TCGA_RNA-Seq TCOF1-GPX3 TCOF1 chr5 149740774 + GPX3 chr5 150404900 + Exonic hg19 STAD TCGA-BR-8289 10 Out-of-Frame Intra-chr q32 q33.1 Tumor suppressor gene Seq+ 14455 ChimerSeq FusionScan TCGA_RNA-Seq GALE-PITHD1 GALE chr1 24125855 - PITHD1 chr1 24112164 + Exonic hg19 STAD TCGA-BR-8289 8 5'UTR-CDS Intra-chr p36.11 p36.11 Seq+ 14456 ChimerSeq FusionScan TCGA_RNA-Seq GDE1-FLYWCH2 GDE1 chr16 19522160 - FLYWCH2 chr16 2945220 + Exonic hg19 STAD TCGA-BR-8289 6 CDS-5'UTR Intra-chr p12.3 p13.3 Seq+ 14457 ChimerSeq FusionScan TCGA_RNA-Seq FKBP11-PRKAG1 FKBP11 chr12 49317564 - PRKAG1 chr12 49399635 - Exonic hg19 STAD TCGA-BR-8289 6 In-Frame Intra-chr q13.12 q13.12 Seq+ 14458 ChimerSeq FusionScan TCGA_RNA-Seq TOP2A-SMARCE1 TOP2A chr17 38554809 - SMARCE1 chr17 38802099 - Exonic hg19 STAD TCGA-BR-8289 5 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 14459 ChimerSeq FusionScan TCGA_RNA-Seq SON-IL10RB SON chr21 34932081 + IL10RB chr21 34668488 + Exonic hg19 STAD TCGA-BR-8289 5 In-Frame Intra-chr q22.11 Transcription factor q22.11 Seq+ 14460 ChimerSeq FusionScan TCGA_RNA-Seq KDM5A-NINJ2 KDM5A chr12 459786 - NINJ2 chr12 675344 - Exonic hg19 STAD TCGA-BR-8289 4 In-Frame Intra-chr p13.33 Tumor suppressor gene p13.33 Seq+ 14461 ChimerSeq FusionScan TCGA_RNA-Seq URI1-C19orf12 URI1 chr19 30433571 + C19orf12 chr19 30193884 - Exonic hg19 STAD TCGA-BR-8289 4 Out-of-Frame Intra-chr q12 q12 Seq+ 14462 ChimerSeq FusionScan TCGA_RNA-Seq THRA-CDK12 THRA chr17 38245586 + CDK12 chr17 37686883 + Exonic hg19 STAD TCGA-BR-8289 3 Out-of-Frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q12 Oncogene Seq+ 14463 ChimerSeq FusionScan TCGA_RNA-Seq GALE-PITHD1 GALE chr1 24127201 - PITHD1 chr1 24112164 + Exonic hg19 STAD TCGA-BR-8289 3 5'UTR-CDS Intra-chr p36.11 p36.11 Seq+ 14464 ChimerSeq FusionScan TCGA_RNA-Seq FLJ31306-TIMM9 FLJ31306 chr14 58758352 - TIMM9 chr14 58893960 - Exonic hg19 STAD TCGA-BR-8289 3 3'UTR-5'UTR Intra-chr q23.1 14465 ChimerSeq FusionScan TCGA_RNA-Seq PEAK1-HMG20A PEAK1 chr15 77712347 - HMG20A chr15 77750745 + Exonic hg19 STAD TCGA-BR-8289 2 5'UTR-5'UTR Intra-chr q24.3 q24.3 Transcription factor 14466 ChimerSeq FusionScan TCGA_RNA-Seq STK11-BSG STK11 chr19 1207202 + BSG chr19 579499 + Exonic hg19 STAD TCGA-BR-8289 2 Out-of-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 14467 ChimerSeq FusionScan TCGA_RNA-Seq LONP1-DUS3L LONP1 chr19 5705782 - DUS3L chr19 5790346 - Exonic hg19 STAD TCGA-BR-8289 2 In-Frame Intra-chr p13.3 p13.3 Seq+ 14468 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1L1-DLC1 WHSC1L1 chr8 38239316 - DLC1 chr8 13259128 - Exonic hg19 STAD TCGA-BR-8289 2 5'UTR-CDS Intra-chr p11.23 Tumor suppressor gene p22 Tumor suppressor gene Seq+ 14469 ChimerSeq FusionScan TCGA_RNA-Seq SOCS1-BCAR4 SOCS1 chr16 11349935 - BCAR4 chr16 11914154 - Exonic hg19 STAD TCGA-BR-8289 2 5'UTR-3'UTR Intra-chr p13.13 Oncogene Tumor suppressor gene p13.13 Seq+ 14470 ChimerSeq FusionScan TCGA_RNA-Seq ACAP3-DVL1 ACAP3 chr1 1229469 - DVL1 chr1 1278138 - Exonic hg19 STAD TCGA-BR-8289 2 In-Frame Intra-chr p36.33 p36.33 Seq+ 14471 ChimerSeq FusionScan TCGA_RNA-Seq FGFR4-CCDC137 FGFR4 chr5 176519512 + CCDC137 chr17 79634758 + Exonic hg19 STAD TCGA-BR-8289 2 Out-of-Frame Inter-chr q35.2 TK:FGFR Oncogene q25.3 14472 ChimerSeq FusionScan TCGA_RNA-Seq TC2N-TRIP11 TC2N chr14 92278655 - TRIP11 chr14 92474196 - Exonic hg19 STAD TCGA-BR-8289 2 Out-of-Frame Intra-chr q32.12 Oncogene Seq+ 14473 ChimerSeq FusionScan TCGA_RNA-Seq POGZ-PSMD4 POGZ chr1 151414556 - PSMD4 chr1 151236389 + Exonic hg19 STAD TCGA-BR-8289 2 Out-of-Frame Intra-chr q21.3 q21.3 Seq+ 14474 ChimerSeq FusionScan TCGA_RNA-Seq ABP1-PON2 ABP1 chr7 150549646 + PON2 chr7 95053897 - Exonic hg19 STAD TCGA-BR-A4J6 3 5'UTR-CDS Intra-chr q21.3 14475 ChimerSeq FusionScan TCGA_RNA-Seq LTA4H-SLC25A24 LTA4H chr12 96402871 - SLC25A24 chr1 108686332 - Exonic hg19 STAD TCGA-BR-A4J6 3 In-Frame Inter-chr q23.1 Seq+ 14476 ChimerSeq FusionScan TCGA_RNA-Seq SDHAF2-PCID2 SDHAF2 chr11 61197654 + PCID2 chr13 113839874 - Exonic hg19 STAD TCGA-BR-A4J6 2 Out-of-Frame Inter-chr q12.2 q34 14477 ChimerSeq FusionScan TCGA_RNA-Seq TMEM66-NPAT TMEM66 chr8 29940362 - NPAT chr11 108068147 - Exonic hg19 STAD TCGA-BR-A4J6 2 In-Frame Inter-chr q22.3 14478 ChimerSeq FusionScan TCGA_RNA-Seq ATG14-HBXIP ATG14 chr14 55862657 - HBXIP chr1 110949001 - Exonic hg19 STAD TCGA-BR-A4J6 2 Out-of-Frame Inter-chr q22.3 14479 ChimerSeq FusionScan TCGA_RNA-Seq SLC12A2-PPP2CA SLC12A2 chr5 127420402 + PPP2CA chr5 133537712 - Exonic hg19 STAD TCGA-HU-A4GH 10 In-Frame Intra-chr q23.3 q31.1 Tumor suppressor gene Seq+ 14480 ChimerSeq FusionScan TCGA_RNA-Seq ARID1A-RPS6KA1 ARID1A chr1 27102198 + RPS6KA1 chr1 26897939 + Exonic hg19 STAD TCGA-HU-A4GH 10 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene Seq+ 14481 ChimerSeq FusionScan TCGA_RNA-Seq FAM120A-WNK2 FAM120A chr9 96261168 + WNK2 chr9 96030908 + Exonic hg19 STAD TCGA-HU-A4GH 9 In-Frame Intra-chr q22.31 q22.31 Tumor suppressor gene Seq+ 14482 ChimerSeq FusionScan TCGA_RNA-Seq DUS1L-ASPSCR1 DUS1L chr17 80021343 - ASPSCR1 chr17 79943382 + Exonic hg19 STAD TCGA-HU-A4GH 9 Out-of-Frame Intra-chr q25.3 q25.3 Seq+ 14483 ChimerSeq FusionScan TCGA_RNA-Seq LRP5-CHRM1 LRP5 chr11 68181480 + CHRM1 chr11 62678650 - Exonic hg19 STAD TCGA-HU-A4GH 8 CDS-5'UTR Intra-chr q13.2 q12.3 Seq+ 14484 ChimerSeq FusionScan TCGA_RNA-Seq HIF1A-PRKCH HIF1A chr14 62162557 + PRKCH chr14 61857942 + Exonic hg19 STAD TCGA-HU-A4GH 7 Out-of-Frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 Seq+ 14485 ChimerSeq FusionScan TCGA_RNA-Seq SETD5-SRGAP3 SETD5 chr3 9470693 + SRGAP3 chr3 9106265 - Exonic hg19 STAD TCGA-HU-A4GH 6 Out-of-Frame Intra-chr p25.3 p25.3 Tumor suppressor gene Seq+ 14486 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0922-ARFIP1 KIAA0922 chr4 154477062 + ARFIP1 chr4 153831215 + Exonic hg19 STAD TCGA-HU-A4GH 6 In-Frame Intra-chr q31.3 q31.3 Seq+ 14487 ChimerSeq FusionScan TCGA_RNA-Seq ATP2B4-CCNI ATP2B4 chr1 203596347 + CCNI chr4 77987558 - Exonic hg19 STAD TCGA-HU-A4GH 5 5'UTR-5'UTR Inter-chr q32.1 q21.1 Seq+ 14488 ChimerSeq FusionScan TCGA_RNA-Seq ABCC3-XYLT2 ABCC3 chr17 48755580 + XYLT2 chr17 48435567 + Exonic hg19 STAD TCGA-HU-A4GH 4 In-Frame Intra-chr q21.33 q21.33 Seq+ 14489 ChimerSeq FusionScan TCGA_RNA-Seq TMEM123-ANGPTL5 TMEM123 chr11 102319542 - ANGPTL5 chr11 101778732 - Exonic hg19 STAD TCGA-HU-A4GH 4 CDS-5'UTR Intra-chr q22.2 q22.1 Seq+ 14490 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-CCDC146 PTPN12 chr7 77230123 + CCDC146 chr7 76922268 + Exonic hg19 STAD TCGA-HU-A4GH 4 Out-of-Frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 14491 ChimerSeq FusionScan TCGA_RNA-Seq B4GALT1-RAF1 B4GALT1 chr9 33166755 - RAF1 chr3 12641914 - Exonic hg19 STAD TCGA-HU-A4GH 3 Out-of-Frame Inter-chr p21.1 p25.2 TKL:RAF Oncogene Seq+ 14492 ChimerSeq FusionScan TCGA_RNA-Seq USP3-RAB8B USP3 chr15 63866602 + RAB8B chr15 63536954 + Exonic hg19 STAD TCGA-HU-A4GH 2 In-Frame Intra-chr q22.31 q22.2 Seq+ 14493 ChimerSeq FusionScan TCGA_RNA-Seq GRAMD4-TBC1D22A GRAMD4 chr22 47033857 + TBC1D22A chr22 47393529 + Exonic hg19 STAD TCGA-HU-A4GH 2 Out-of-Frame Intra-chr q13.31 q13.31 Seq+ 14494 ChimerSeq FusionScan TCGA_RNA-Seq TDP1-C14orf101 TDP1 chr14 90499558 + C14orf101 chr14 57051718 + Exonic hg19 STAD TCGA-HU-A4GH 2 In-Frame Intra-chr q32.11 14495 ChimerSeq FusionScan TCGA_RNA-Seq RAB10-ELMOD3 RAB10 chr2 26257604 + ELMOD3 chr2 85616873 + Exonic hg19 STAD TCGA-HU-A4GH 2 Out-of-Frame Intra-chr p23.3 p11.2 Seq+ 14496 ChimerSeq FusionScan TCGA_RNA-Seq ASCC1-MICU1 ASCC1 chr10 73956568 - MICU1 chr10 74135630 - Exonic hg19 STAD TCGA-HU-A4GH 2 Out-of-Frame Intra-chr q22.1 q22.1 Seq+ 14497 ChimerSeq FusionScan TCGA_RNA-Seq ATP7A-PGK1 ATP7A chrX 77166332 + PGK1 chrX 77365363 + Exonic hg19 STAD TCGA-HU-A4GH 2 5'UTR-CDS Intra-chr q21.1 q21.1 Seq+ 14498 ChimerSeq FusionScan TCGA_RNA-Seq PDSS1-NUFIP2 PDSS1 chr10 26998697 + NUFIP2 chr17 27594548 - Exonic hg19 STAD TCGA-HU-A4GH 2 Out-of-Frame Inter-chr p12.1 q11.2 14499 ChimerSeq FusionScan TCGA_RNA-Seq CCDC146-MYOM3 CCDC146 chr7 76797141 + MYOM3 chr1 24394857 - Exonic hg19 STAD TCGA-HU-A4GH 2 In-Frame Inter-chr q11.23 p36.11 Seq+ 14500 ChimerSeq FusionScan TCGA_RNA-Seq POLDIP3-ARFGAP3 POLDIP3 chr22 42983511 - ARFGAP3 chr22 43204896 - Exonic hg19 STAD TCGA-HU-A4GH 2 In-Frame Intra-chr q13.2 q13.2 Seq+ 14501 ChimerSeq FusionScan TCGA_RNA-Seq NCOR2-KCNQ1 NCOR2 chr12 124835132 - KCNQ1 chr11 2790073 + Exonic hg19 STAD TCGA-HU-A4GH 2 Out-of-Frame Inter-chr q24.31 p15.5 Seq+ 14502 ChimerSeq FusionScan TCGA_RNA-Seq LAMA3-OSBPL1A LAMA3 chr18 21513899 + OSBPL1A chr18 21892070 - Exonic hg19 STAD TCGA-IN-A7NU 6 In-Frame Intra-chr q11.2 q11.2 Seq+ 14503 ChimerSeq FusionScan TCGA_RNA-Seq TYW1-C7orf42 TYW1 chr7 66474671 + C7orf42 chr7 66415938 + Exonic hg19 STAD TCGA-IN-A7NU 5 Out-of-Frame Intra-chr q11.21 Seq+ 14504 ChimerSeq FusionScan TCGA_RNA-Seq TYW1-C7orf42 TYW1 chr7 66463941 + C7orf42 chr7 66415938 + Exonic hg19 STAD TCGA-IN-A7NU 3 Out-of-Frame Intra-chr q11.21 Seq+ 14505 ChimerSeq FusionScan TCGA_RNA-Seq WDR37-ATP5C1 WDR37 chr10 1123943 + ATP5C1 chr10 7848936 + Exonic hg19 STAD TCGA-IN-A7NU 3 Out-of-Frame Intra-chr p15.3 p14 14506 ChimerSeq FusionScan TCGA_RNA-Seq UBAP2-SPATA5L1 UBAP2 chr9 33988970 - SPATA5L1 chr15 45713240 + Exonic hg19 STAD TCGA-IN-A7NU 2 Out-of-Frame Inter-chr p13.3 q21.1 14507 ChimerSeq FusionScan TCGA_RNA-Seq CYP7B1-SCAF4 CYP7B1 chr8 65711022 - SCAF4 chr21 33044667 - Exonic hg19 STAD TCGA-IN-A7NU 2 Out-of-Frame Inter-chr q12.3 q22.11 14508 ChimerSeq FusionScan TCGA_RNA-Seq BHLHE40-TTLL3 BHLHE40 chr3 5021483 + TTLL3 chr3 9852304 + Exonic hg19 STAD TCGA-IN-A7NU 2 Out-of-Frame Intra-chr p26.1 Transcription factor p25.3 14509 ChimerSeq FusionScan TCGA_RNA-Seq SERBP1-CTSA SERBP1 chr1 67885691 - CTSA chr20 44521858 + Exonic hg19 STAD TCGA-VQ-A94R 2 In-Frame Inter-chr p31.3 q13.12 14510 ChimerSeq FusionScan TCGA_RNA-Seq STK3-NNT STK3 chr8 99718694 - NNT chr5 43675612 + Exonic hg19 STAD TCGA-VQ-A94R 2 In-Frame Inter-chr q22.2 p12 14511 ChimerSeq FusionScan TCGA_RNA-Seq RERE-LINC00319 RERE chr1 8482786 - LINC00319 chr21 44871052 + Exonic hg19 STAD TCGA-VQ-A94R 2 5'UTR-5'UTR Inter-chr p36.23 q22.3 Seq+ 14512 ChimerSeq FusionScan TCGA_RNA-Seq TMC7-OGDH TMC7 chr16 18995452 + OGDH chr7 44663915 + Exonic hg19 STAD TCGA-VQ-A94R 2 CDS-5'UTR Inter-chr p12.3 p13 14513 ChimerSeq FusionScan TCGA_RNA-Seq SLC12A7-TERT SLC12A7 chr5 1074681 - TERT chr5 1266650 - Exonic hg19 STAD TCGA-BR-4357 8 In-Frame Intra-chr p15.33 p15.33 Oncogene Seq+ 14514 ChimerSeq FusionScan TCGA_RNA-Seq USP6NL-UPF2 USP6NL chr10 11532830 - UPF2 chr10 11973781 - Exonic hg19 STAD TCGA-BR-4357 4 In-Frame Intra-chr p14 p14 Seq+ 14515 ChimerSeq FusionScan TCGA_RNA-Seq SPECC1L-CABIN1 SPECC1L chr22 24765288 + CABIN1 chr22 24479180 + Exonic hg19 STAD TCGA-BR-4357 4 In-Frame Intra-chr q11.23 Seq+ 14516 ChimerSeq FusionScan TCGA_RNA-Seq USP12-LNX2 USP12 chr13 27669737 - LNX2 chr13 28134122 - Exonic hg19 STAD TCGA-BR-4357 3 In-Frame Intra-chr q12.13 Tumor suppressor gene q12.2 Seq+ 14517 ChimerSeq FusionScan TCGA_RNA-Seq KDM1A-EPHB2 KDM1A chr1 23357127 + EPHB2 chr1 23208851 + Exonic hg19 STAD TCGA-BR-4357 3 In-Frame Intra-chr p36.12 p36.12 Tumor suppressor gene Seq+ 14518 ChimerSeq FusionScan TCGA_RNA-Seq TAF13-SORT1 TAF13 chr1 109618542 - SORT1 chr1 109867711 - Exonic hg19 STAD TCGA-BR-4357 3 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 14519 ChimerSeq FusionScan TCGA_RNA-Seq CHD6-DHX58 CHD6 chr20 40043825 - DHX58 chr17 40253964 - Exonic hg19 STAD TCGA-BR-4357 3 In-Frame Inter-chr q12 q21.2 Seq+ 14520 ChimerSeq FusionScan TCGA_RNA-Seq ENO1-SLC2A5 ENO1 chr1 8938638 - SLC2A5 chr1 9107793 - Exonic hg19 STAD TCGA-BR-4357 3 5'UTR-CDS Intra-chr p36.23 p36.23 14521 ChimerSeq FusionScan TCGA_RNA-Seq PRKAR2A-RHOA PRKAR2A chr3 48845081 - RHOA chr3 49405981 - Exonic hg19 STAD TCGA-BR-4357 2 Out-of-Frame Intra-chr p21.31 p21.31 Oncogene Tumor suppressor gene 14522 ChimerSeq FusionScan TCGA_RNA-Seq ZFAND3-MDGA1 ZFAND3 chr6 38084515 + MDGA1 chr6 37631882 - Exonic hg19 STAD TCGA-BR-4357 2 In-Frame Intra-chr p21.2 p21.2 Seq+ 14523 ChimerSeq FusionScan TCGA_RNA-Seq PDHX-CAT PDHX chr11 34938362 + CAT chr11 34470738 + Exonic hg19 STAD TCGA-BR-4357 2 Out-of-Frame Intra-chr p13 p13 Tumor suppressor gene Seq+ 14524 ChimerSeq FusionScan TCGA_RNA-Seq CAB39-ERBB2 CAB39 chr2 231577945 + ERBB2 chr17 37863242 + Exonic hg19 STAD TCGA-BR-4357 2 5'UTR-5'UTR Inter-chr q37.1 q12 Oncogene 14525 ChimerSeq FusionScan TCGA_RNA-Seq ILF3-SLC44A2 ILF3 chr19 10765163 + SLC44A2 chr19 10736928 + Exonic hg19 STAD TCGA-BR-4357 2 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 14526 ChimerSeq FusionScan TCGA_RNA-Seq CRADD-MRPL42 CRADD chr12 94072848 + MRPL42 chr12 93894951 + Exonic hg19 STAD TCGA-BR-4357 2 Out-of-Frame Intra-chr q22 q22 Seq+ 14527 ChimerSeq FusionScan TCGA_RNA-Seq MAP3K6-IFI6 MAP3K6 chr1 27691263 - IFI6 chr1 27995857 - Exonic hg19 STAD TCGA-BR-4357 2 CDS-5'UTR Intra-chr p36.11 STE:STE11 p35.3 14528 ChimerSeq FusionScan TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104654982 + LHFPL3 chr7 104546633 + Exonic hg19 STAD TCGA-BR-4357 2 5'UTR-CDS Intra-chr q22.2 Seq+ 14529 ChimerSeq FusionScan TCGA_RNA-Seq PHACTR4-TRNAU1AP PHACTR4 chr1 28733974 + TRNAU1AP chr1 28880151 + Exonic hg19 STAD TCGA-BR-4357 2 Out-of-Frame Intra-chr p35.3 Tumor suppressor gene p35.3 Seq+ 14530 ChimerSeq FusionScan TCGA_RNA-Seq MIEN1-CDK12 MIEN1 chr17 37885937 - CDK12 chr17 37671983 + Exonic hg19 STAD TCGA-BR-4357 2 Out-of-Frame Intra-chr q12 q12 Oncogene 14531 ChimerSeq FusionScan TCGA_RNA-Seq POLDIP3-ARFGAP3 POLDIP3 chr22 42995703 - ARFGAP3 chr22 43243638 - Exonic hg19 STAD TCGA-BR-4357 2 In-Frame Intra-chr q13.2 q13.2 Seq+ 14532 ChimerSeq FusionScan TCGA_RNA-Seq PNRC2-BCAR4 PNRC2 chr1 24286488 + BCAR4 chr16 11914154 - Exonic hg19 STAD TCGA-BR-4366 5 5'UTR-3'UTR Inter-chr p36.11 p13.13 14533 ChimerSeq FusionScan TCGA_RNA-Seq SRSF9-RFX4 SRSF9 chr12 120907224 - RFX4 chr12 107109177 + Exonic hg19 STAD TCGA-BR-4366 5 Out-of-Frame Intra-chr q24.31 q23.3 Transcription factor Seq+ 14534 ChimerSeq FusionScan TCGA_RNA-Seq SORD-TRIM69 SORD chr15 45315547 + TRIM69 chr15 45059428 + Exonic hg19 STAD TCGA-BR-4366 4 Out-of-Frame Intra-chr q21.1 Seq+ 14535 ChimerSeq FusionScan TCGA_RNA-Seq DYNLRB1-RALY DYNLRB1 chr20 33104266 + RALY chr20 32619327 + Exonic hg19 STAD TCGA-BR-4366 4 CDS-5'UTR Intra-chr q11.22 q11.22 Seq+ 14536 ChimerSeq FusionScan TCGA_RNA-Seq JDP2-ZC2HC1C JDP2 chr14 75904824 + ZC2HC1C chr14 75544234 + Exonic hg19 STAD TCGA-BR-4366 3 In-Frame Intra-chr q24.3 Tumor suppressor gene Transcription factor q24.3 14537 ChimerSeq FusionScan TCGA_RNA-Seq ACER3-C11orf30 ACER3 chr11 76572123 + C11orf30 chr11 76248838 + Exonic hg19 STAD TCGA-BR-4366 2 In-Frame Intra-chr q13.5 Seq+ 14538 ChimerSeq FusionScan TCGA_RNA-Seq XYLB-DLEC1 XYLB chr3 38420833 + DLEC1 chr3 38149074 + Exonic hg19 STAD TCGA-BR-4366 2 Out-of-Frame Intra-chr p22.2 p22.2 Tumor suppressor gene Seq+ 14539 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D22A-GTSE1 TBC1D22A chr22 47158745 + GTSE1 chr22 46722332 + Exonic hg19 STAD TCGA-BR-4366 2 In-Frame Intra-chr q13.31 q13.31 Seq+ 14540 ChimerSeq FusionScan TCGA_RNA-Seq HSPB11-SSBP3 HSPB11 chr1 54395711 - SSBP3 chr1 54708972 - Exonic hg19 STAD TCGA-BR-4366 2 Out-of-Frame Intra-chr p32.3 p32.3 Seq+ 14541 ChimerSeq FusionScan TCGA_RNA-Seq NPLOC4-STRA13 NPLOC4 chr17 79589191 - STRA13 chr17 79977785 - Exonic hg19 STAD TCGA-D7-5578 4 Out-of-Frame Intra-chr q25.3 14542 ChimerSeq FusionScan TCGA_RNA-Seq GTF3C2-EIF3H GTF3C2 chr2 27579605 - EIF3H chr8 117661165 - Exonic hg19 STAD TCGA-D7-5578 2 5'UTR-CDS Inter-chr p23.3 q24.11 14543 ChimerSeq FusionScan TCGA_RNA-Seq CDH3-CLEC18A CDH3 chr16 68679653 + CLEC18A chr16 69992844 + Exonic hg19 STAD TCGA-BR-6565 4 Out-of-Frame Intra-chr q22.1 q22.1 14544 ChimerSeq FusionScan TCGA_RNA-Seq ZFAND3-DNAJC15 ZFAND3 chr6 37897775 + DNAJC15 chr13 43681313 + Exonic hg19 STAD TCGA-BR-6565 2 In-Frame Inter-chr p21.2 q14.11 14545 ChimerSeq FusionScan TCGA_RNA-Seq TRAPPC9-PEX2 TRAPPC9 chr8 140998933 - PEX2 chr8 77912368 - Exonic hg19 STAD TCGA-BR-6565 2 CDS-5'UTR Intra-chr q24.3 q21.13 14546 ChimerSeq FusionScan TCGA_RNA-Seq RFWD2-RASAL2 RFWD2 chr1 176118141 - RASAL2 chr1 178389645 + Exonic hg19 STAD TCGA-BR-6565 2 In-Frame Intra-chr q25.2 Tumor suppressor gene q25.2 Tumor suppressor gene 14547 ChimerSeq FusionScan TCGA_RNA-Seq ME2-MBD2 ME2 chr18 48405678 + MBD2 chr18 51715381 - Exonic hg19 STAD TCGA-BR-6565 2 5'UTR-CDS Intra-chr q21.2 q21.2 Transcription factor 14548 ChimerSeq FusionScan TCGA_RNA-Seq ZNF43-DDX39B ZNF43 chr19 22034706 - DDX39B chr6 31500688 - Exonic hg19 STAD TCGA-BR-6565 2 5'UTR-5'UTR Inter-chr p12 Transcription factor 14549 ChimerSeq FusionScan TCGA_RNA-Seq ARPC1A-PDAP1 ARPC1A chr7 98923627 + PDAP1 chr7 99002576 - Exonic hg19 STAD TCGA-BR-6565 2 5'UTR-CDS Intra-chr q22.1 q22.1 14550 ChimerSeq FusionScan TCGA_RNA-Seq UXS1-FHL2 UXS1 chr2 106810603 - FHL2 chr2 106002997 - Exonic hg19 STAD TCGA-BR-6565 2 CDS-5'UTR Intra-chr q12.2 q12.2 14551 ChimerSeq FusionScan TCGA_RNA-Seq MAP4K4-SYF2 MAP4K4 chr2 102315000 + SYF2 chr1 25551591 - Exonic hg19 STAD TCGA-HU-A4H4 12 Out-of-Frame Inter-chr q11.2 p36.11 Seq+ 14552 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57915655 + Exonic hg19 STAD TCGA-HU-A4H4 8 Out-of-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 14553 ChimerSeq FusionScan TCGA_RNA-Seq PICALM-MEG3 PICALM chr11 85779692 - MEG3 chr14 101295044 + Exonic hg19 STAD TCGA-HU-A4H4 5 CDS-5'UTR Inter-chr q14.2 q32.2 Tumor suppressor gene 14554 ChimerSeq FusionScan TCGA_RNA-Seq LSM12-ATXN7L3 LSM12 chr17 42141168 - ATXN7L3 chr17 42272508 - Exonic hg19 STAD TCGA-HU-A4H4 3 In-Frame Intra-chr q21.31 q21.31 14555 ChimerSeq FusionScan TCGA_RNA-Seq SNAP91-MEG3 SNAP91 chr6 84417516 - MEG3 chr14 101295044 + Exonic hg19 STAD TCGA-HU-A4H4 2 5'UTR-5'UTR Inter-chr q14.2 q32.2 Tumor suppressor gene 14556 ChimerSeq FusionScan TCGA_RNA-Seq SETD8-HGSNAT SETD8 chr12 123868755 + HGSNAT chr8 43037287 + Exonic hg19 STAD TCGA-HU-A4H4 2 In-Frame Inter-chr p11.21 14557 ChimerSeq FusionScan TCGA_RNA-Seq PDGFA-PRKAR1B PDGFA chr7 550445 - PRKAR1B chr7 635941 - Exonic hg19 STAD TCGA-CD-5803 2 In-Frame Intra-chr p22.3 p22.3 Seq+ 14558 ChimerSeq FusionScan TCGA_RNA-Seq WIPF2-CD99 WIPF2 chr17 38375744 + CD99 chrY 2591354 + Exonic hg19 STAD TCGA-RD-A7BT 78 5'UTR-CDS Inter-chr q21.2 p22.33 Seq+ 14559 ChimerSeq FusionScan TCGA_RNA-Seq RARA-C17orf108 RARA chr17 38487648 + C17orf108 chr17 26209738 - Exonic hg19 STAD TCGA-RD-A7BT 33 CDS-5'UTR Intra-chr q21.2 Oncogene Transcription factor Seq+ 14560 ChimerSeq FusionScan TCGA_RNA-Seq WIPF2-CD99 WIPF2 chr17 38375744 + CD99 chrY 2594300 + Exonic hg19 STAD TCGA-RD-A7BT 25 5'UTR-CDS Inter-chr q21.2 p22.33 Seq+ 14561 ChimerSeq FusionScan TCGA_RNA-Seq RARA-C17orf108 RARA chr17 38487648 + C17orf108 chr17 26207392 - Exonic hg19 STAD TCGA-RD-A7BT 21 Out-of-Frame Intra-chr q21.2 Oncogene Transcription factor Seq+ 14562 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-NSMCE2 PVT1 chr8 128806980 + NSMCE2 chr8 126194344 + Exonic hg19 STAD TCGA-RD-A7BT 20 5'UTR-CDS Intra-chr q24.21 q24.13 KB Pub 14563 ChimerSeq FusionScan TCGA_RNA-Seq JUP-FKBP10 JUP chr17 39927898 - FKBP10 chr17 39976520 + Exonic hg19 STAD TCGA-RD-A7BT 14 In-Frame Intra-chr q21.2 Tumor suppressor gene q21.2 Seq+ 14564 ChimerSeq FusionScan TCGA_RNA-Seq C17orf108-LEPREL4 C17orf108 chr17 26207299 - LEPREL4 chr17 39967536 - Exonic hg19 STAD TCGA-RD-A7BT 11 In-Frame Intra-chr 14565 ChimerSeq FusionScan TCGA_RNA-Seq WIPF2-CD99 WIPF2 chr17 38375744 + CD99 chrY 2606240 + Exonic hg19 STAD TCGA-RD-A7BT 9 5'UTR-CDS Inter-chr q21.2 p22.33 Seq+ 14566 ChimerSeq FusionScan TCGA_RNA-Seq WIPF2-SUZ12 WIPF2 chr17 38375744 + SUZ12 chr17 30274635 + Exonic hg19 STAD TCGA-RD-A7BT 6 5'UTR-CDS Intra-chr q21.2 q11.2 Tumor suppressor gene 14567 ChimerSeq FusionScan TCGA_RNA-Seq BAIAP2L1-GTF2IRD2B BAIAP2L1 chr7 98030113 - GTF2IRD2B chr7 74548942 + Exonic hg19 STAD TCGA-RD-A7BT 6 Out-of-Frame Intra-chr q22.1 q11.23 Transcription factor 14568 ChimerSeq FusionScan TCGA_RNA-Seq SLC12A7-CRCP SLC12A7 chr5 1111982 - CRCP chr7 65592690 + Exonic hg19 STAD TCGA-RD-A7BT 4 Out-of-Frame Inter-chr p15.33 q11.21 14569 ChimerSeq FusionScan TCGA_RNA-Seq RARA-C17orf108 RARA chr17 38499119 + C17orf108 chr17 26209738 - Exonic hg19 STAD TCGA-RD-A7BT 4 CDS-5'UTR Intra-chr q21.2 Oncogene Transcription factor Seq+ 14570 ChimerSeq FusionScan TCGA_RNA-Seq C17orf108-HAP1 C17orf108 chr17 26207299 - HAP1 chr17 39884583 - Exonic hg19 STAD TCGA-RD-A7BT 4 Out-of-Frame Intra-chr q21.2 Seq+ 14571 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-NSMCE2 PVT1 chr8 128806980 + NSMCE2 chr8 126369460 + Exonic hg19 STAD TCGA-RD-A7BT 4 5'UTR-CDS Intra-chr q24.21 q24.13 KB Pub 14572 ChimerSeq FusionScan TCGA_RNA-Seq RARA-C17orf108 RARA chr17 38499119 + C17orf108 chr17 26207392 - Exonic hg19 STAD TCGA-RD-A7BT 3 Out-of-Frame Intra-chr q21.2 Oncogene Transcription factor Seq+ 14573 ChimerSeq FusionScan TCGA_RNA-Seq C17orf108-LEPREL4 C17orf108 chr17 26207299 - LEPREL4 chr17 39963131 - Exonic hg19 STAD TCGA-RD-A7BT 3 In-Frame Intra-chr 14574 ChimerSeq FusionScan TCGA_RNA-Seq RARA-DAZAP1 RARA chr17 38487648 + DAZAP1 chr19 1417498 + Exonic hg19 STAD TCGA-RD-A7BT 2 Out-of-Frame Inter-chr q21.2 Oncogene Transcription factor p13.3 14575 ChimerSeq FusionScan TCGA_RNA-Seq RARA-LEPREL4 RARA chr17 38487648 + LEPREL4 chr17 39967536 - Exonic hg19 STAD TCGA-RD-A7BT 2 Out-of-Frame Intra-chr q21.2 Oncogene Transcription factor 14576 ChimerSeq FusionScan TCGA_RNA-Seq PAPD7-CALN1 PAPD7 chr5 6742710 + CALN1 chr7 71743795 - Exonic hg19 STAD TCGA-RD-A7BT 2 Out-of-Frame Inter-chr p15.31 q11.22 14577 ChimerSeq FusionScan TCGA_RNA-Seq SLC16A5-GGA3 SLC16A5 chr17 73100275 + GGA3 chr17 73242877 - Exonic hg19 STAD TCGA-RD-A7BT 2 Out-of-Frame Intra-chr q25.1 q25.1 14578 ChimerSeq FusionScan TCGA_RNA-Seq RARA-JUP RARA chr17 38487648 + JUP chr17 39928114 - Exonic hg19 STAD TCGA-RD-A7BT 2 CDS-5'UTR Intra-chr q21.2 Oncogene Transcription factor q21.2 Tumor suppressor gene 14579 ChimerSeq FusionScan TCGA_RNA-Seq CDC42-CAPZB CDC42 chr1 22413359 + CAPZB chr1 19746244 - Exonic hg19 STAD TCGA-RD-A7BT 2 In-Frame Intra-chr p36.12 p36.13 14580 ChimerSeq FusionScan TCGA_RNA-Seq ZNF827-LSM6 ZNF827 chr4 146859516 - LSM6 chr4 147104063 + Exonic hg19 STAD TCGA-RD-A7BT 2 CDS-5'UTR Intra-chr q31.22 Transcription factor q31.22 14581 ChimerSeq FusionScan TCGA_RNA-Seq FAM193A-HTT FAM193A chr4 2702271 + HTT chr4 3190677 + Exonic hg19 STAD TCGA-CD-A48A 4 Out-of-Frame Intra-chr p16.3 p16.3 Seq+ 14582 ChimerSeq FusionScan TCGA_RNA-Seq UGDH-RFC1 UGDH chr4 39522970 - RFC1 chr4 39322994 - Exonic hg19 STAD TCGA-CD-A48A 2 In-Frame Intra-chr p14 p14 14583 ChimerSeq FusionScan TCGA_RNA-Seq ATP5O-TMEM50B ATP5O chr21 35284592 - TMEM50B chr21 34839429 - Exonic hg19 STAD TCGA-CD-A48A 2 In-Frame Intra-chr q22.11 14584 ChimerSeq FusionScan TCGA_RNA-Seq FNDC3A-ITM2B FNDC3A chr13 49580425 + ITM2B chr13 48827943 + Exonic hg19 STAD TCGA-B7-A5TJ 2 In-Frame Intra-chr q14.2 q14.2 14585 ChimerSeq FusionScan TCGA_RNA-Seq DIP2A-PTGES3 DIP2A chr21 47949096 + PTGES3 chr12 57064148 - Exonic hg19 STAD TCGA-B7-A5TJ 2 In-Frame Inter-chr q22.3 q13.3 14586 ChimerSeq FusionScan TCGA_RNA-Seq GPD1L-CMTM7 GPD1L chr3 32148250 + CMTM7 chr3 32483331 + Exonic hg19 STAD TCGA-B7-A5TJ 2 Out-of-Frame Intra-chr p22.3 p22.3 Seq+ 14587 ChimerSeq FusionScan TCGA_RNA-Seq IQGAP1-XRN2 IQGAP1 chr15 90999547 + XRN2 chr20 21306916 + Exonic hg19 STAD TCGA-B7-A5TJ 2 In-Frame Inter-chr q26.1 p11.22 14588 ChimerSeq FusionScan TCGA_RNA-Seq SLC36A1-LARP1 SLC36A1 chr5 150827374 + LARP1 chr5 154169884 + Exonic hg19 STAD TCGA-B7-A5TJ 2 5'UTR-CDS Intra-chr q33.1 q33.2 14589 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0100-XBP1 KIAA0100 chr17 26958837 - XBP1 chr22 29191720 - Exonic hg19 STAD TCGA-B7-A5TJ 2 Out-of-Frame Inter-chr q11.2 q12.1 Transcription factor 14590 ChimerSeq FusionScan TCGA_RNA-Seq EIF2S3-PRDX4 EIF2S3 chrX 24078299 + PRDX4 chrX 23704401 + Exonic hg19 STAD TCGA-CG-5718 7 Out-of-Frame Intra-chr p22.11 p22.11 Seq+ 14591 ChimerSeq FusionScan TCGA_RNA-Seq MGAT5-GPR39 MGAT5 chr2 135186010 + GPR39 chr2 133402673 + Exonic hg19 STAD TCGA-CG-5718 6 Out-of-Frame Intra-chr q21.2 q21.2 Seq+ 14592 ChimerSeq FusionScan TCGA_RNA-Seq SMG1-IGSF6 SMG1 chr16 18908114 - IGSF6 chr16 21658813 - Exonic hg19 STAD TCGA-CG-5718 4 In-Frame Intra-chr p12.3 Atypical:PIKK 14593 ChimerSeq FusionScan TCGA_RNA-Seq EPS15L1-EEF1D EPS15L1 chr19 16582723 - EEF1D chr8 144669022 - Exonic hg19 STAD TCGA-CG-5718 2 Out-of-Frame Inter-chr p13.11 14594 ChimerSeq FusionScan TCGA_RNA-Seq APP-PRKAA1 APP chr21 27423315 - PRKAA1 chr5 40775605 - Exonic hg19 STAD TCGA-CG-5718 2 In-Frame Inter-chr q21.3 p13.1 Tumor suppressor gene 14595 ChimerSeq FusionScan TCGA_RNA-Seq MUC13-MGC72080 MUC13 chr3 124631957 - MGC72080 chr7 97598364 - Exonic hg19 STAD TCGA-CG-5718 2 CDS-3'UTR Inter-chr q21.2 14596 ChimerSeq FusionScan TCGA_RNA-Seq RAB2A-CLVS1 RAB2A chr8 61429812 + CLVS1 chr8 62212235 + Exonic hg19 STAD TCGA-BR-8592 2 CDS-5'UTR Intra-chr q12.1 q12.2 Seq+ 14597 ChimerSeq FusionScan TCGA_RNA-Seq HSPA5-SRM HSPA5 chr9 128002450 - SRM chr1 11115141 - Exonic hg19 STAD TCGA-D7-6521 2 In-Frame Inter-chr q33.3 p36.22 TK:Src 14598 ChimerSeq FusionScan TCGA_RNA-Seq PHF14-MEOX2 PHF14 chr7 11030474 + MEOX2 chr7 15652236 - Exonic hg19 STAD TCGA-D7-6521 2 Out-of-Frame Intra-chr p21.3 p21.2 Transcription factor Seq+ 14599 ChimerSeq FusionScan TCGA_RNA-Seq SFMBT1-NT5DC2 SFMBT1 chr3 52977368 - NT5DC2 chr3 52558897 - Exonic hg19 STAD TCGA-D7-6521 2 Out-of-Frame Intra-chr p21.1 p21.1 14600 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB2-AKAP12 ZBTB2 chr6 151694599 - AKAP12 chr6 151669845 + Exonic hg19 STAD TCGA-HU-A4H8 12 Out-of-Frame Intra-chr q25.1 Transcription factor q25.1 Tumor suppressor gene Seq+ 14601 ChimerSeq FusionScan TCGA_RNA-Seq INTS6-RNASEH2B INTS6 chr13 52025160 - RNASEH2B chr13 51501542 + Exonic hg19 STAD TCGA-HU-A4H8 2 Out-of-Frame Intra-chr q14.3 Tumor suppressor gene q14.3 14602 ChimerSeq FusionScan TCGA_RNA-Seq LGALS3-CDKAL1 LGALS3 chr14 55596018 + CDKAL1 chr6 20649523 + Exonic hg19 STAD TCGA-HU-A4H8 2 5'UTR-CDS Inter-chr q22.3 p22.3 14603 ChimerSeq FusionScan TCGA_RNA-Seq ATXN7L1-C16orf62 ATXN7L1 chr7 105429049 - C16orf62 chr16 19680481 + Exonic hg19 STAD TCGA-HU-A4H8 2 In-Frame Inter-chr q22.3 p12.3 14604 ChimerSeq FusionScan TCGA_RNA-Seq ACP1-MID1 ACP1 chr2 265007 + MID1 chrX 10535643 - Exonic hg19 STAD TCGA-HU-A4H8 2 5'UTR-5'UTR Inter-chr p25.3 p22.2 14605 ChimerSeq FusionScan TCGA_RNA-Seq ABHD2-FANCI ABHD2 chr15 89736550 + FANCI chr15 89790859 + Exonic hg19 STAD TCGA-HU-A4H8 2 CDS-5'UTR Intra-chr q26.1 q26.1 14606 ChimerSeq FusionScan TCGA_RNA-Seq PLK4-FAM192A PLK4 chr4 128803081 + FAM192A chr16 57207781 - Exonic hg19 STAD TCGA-HU-A4H8 2 CDS-5'UTR Inter-chr q28.1 Other:PLK q13 14607 ChimerSeq FusionScan TCGA_RNA-Seq C17orf78-UBE2F C17orf78 chr17 35733092 + UBE2F chr2 238933982 + Exonic hg19 STAD TCGA-BR-6563 4 Out-of-Frame Inter-chr q37.3 14608 ChimerSeq FusionScan TCGA_RNA-Seq EIF2C3-PKD1 EIF2C3 chr1 36411464 + PKD1 chr16 2169379 - Exonic hg19 STAD TCGA-BR-8365 2 In-Frame Inter-chr p13.3 CAMK:PKD Tumor suppressor gene 14609 ChimerSeq FusionScan TCGA_RNA-Seq CFD-KLK11 CFD chr19 861956 + KLK11 chr19 51525953 - Exonic hg19 STAD TCGA-BR-8365 2 In-Frame Intra-chr p13.3 q13.41 14610 ChimerSeq FusionScan TCGA_RNA-Seq AP5S1-CHP AP5S1 chr20 3802940 + CHP chr15 41549107 + Exonic hg19 STAD TCGA-BR-8365 2 In-Frame Inter-chr p13 14611 ChimerSeq FusionScan TCGA_RNA-Seq KLHDC5-LAMC2 KLHDC5 chr12 27944834 + LAMC2 chr1 183196649 + Exonic hg19 STAD TCGA-BR-8365 2 In-Frame Inter-chr q25.3 14612 ChimerSeq FusionScan TCGA_RNA-Seq MAD1L1-FTSJ2 MAD1L1 chr7 2252846 - FTSJ2 chr7 2275199 - Exonic hg19 STAD TCGA-BR-8365 2 Out-of-Frame Intra-chr p22.3 Tumor suppressor gene Seq+ 14613 ChimerSeq FusionScan TCGA_RNA-Seq CTPS2-IL1RAPL1 CTPS2 chrX 16716358 - IL1RAPL1 chrX 28807436 + Exonic hg19 STAD TCGA-BR-8365 2 CDS-5'UTR Intra-chr p22.2 p21.3 Seq+ 14614 ChimerSeq FusionScan TCGA_RNA-Seq RHEB-ABCF2 RHEB chr7 151216545 - ABCF2 chr7 150923586 - Exonic hg19 STAD TCGA-CG-4304 3 CDS-5'UTR Intra-chr q36.1 Oncogene q36.1 Seq+ 14615 ChimerSeq FusionScan TCGA_RNA-Seq RAB20-MYO16 RAB20 chr13 111213694 - MYO16 chr13 109610035 + Exonic hg19 STAD TCGA-D7-6518 3 Out-of-Frame Intra-chr q34 Seq+ 14616 ChimerSeq FusionScan TCGA_RNA-Seq PLAG1-PENK PLAG1 chr8 57123679 - PENK chr8 57359040 - Exonic hg19 STAD TCGA-D7-6518 3 5'UTR-5'UTR Intra-chr q12.1 Oncogene Transcription factor q12.1 14617 ChimerSeq FusionScan TCGA_RNA-Seq STK38-WDR74 STK38 chr6 36514966 - WDR74 chr11 62607131 - Exonic hg19 STAD TCGA-D7-6518 2 5'UTR-5'UTR Inter-chr p21.31 q12.3 14618 ChimerSeq FusionScan TCGA_RNA-Seq THAP5-IMMP2L THAP5 chr7 108209933 - IMMP2L chr7 111201979 - Exonic hg19 STAD TCGA-D7-6518 2 CDS-5'UTR Intra-chr q31.1 Transcription factor q31.1 14619 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB44-VPS26B ZBTB44 chr11 130184269 - VPS26B chr11 134104790 + Exonic hg19 STAD TCGA-D7-6518 2 5'UTR-CDS Intra-chr q24.3 Transcription factor q25 14620 ChimerSeq FusionScan TCGA_RNA-Seq CDH1-CIRH1A CDH1 chr16 68772314 + CIRH1A chr16 69177080 + Exonic hg19 STAD TCGA-D7-6518 2 In-Frame Intra-chr q22.1 Oncogene Tumor suppressor gene 14621 ChimerSeq FusionScan TCGA_RNA-Seq BCAR3-PIBF1 BCAR3 chr1 94107859 - PIBF1 chr13 73572959 + Exonic hg19 STAD TCGA-D7-6518 2 In-Frame Inter-chr p22.1 q21.33 14622 ChimerSeq FusionScan TCGA_RNA-Seq VIPR2-SCTR VIPR2 chr7 158826903 - SCTR chr2 120199175 - Exonic hg19 STAD TCGA-D7-6518 2 Out-of-Frame Inter-chr q36.3 q14.2 14623 ChimerSeq FusionScan TCGA_RNA-Seq TCTA-TBX6 TCTA chr3 49450543 + TBX6 chr16 30098172 - Exonic hg19 STAD TCGA-D7-6518 2 In-Frame Inter-chr p21.31 p11.2 Transcription factor 14624 ChimerSeq FusionScan TCGA_RNA-Seq VCL-ADK VCL chr10 75758133 + ADK chr10 76349039 + Exonic hg19 STAD TCGA-VQ-A8DT 6 In-Frame Intra-chr q22.2 q22.2 Seq+ 14625 ChimerSeq FusionScan TCGA_RNA-Seq VCL-ADK VCL chr10 75758133 + ADK chr10 76285013 + Exonic hg19 STAD TCGA-VQ-A8DT 4 In-Frame Intra-chr q22.2 q22.2 Seq+ 14626 ChimerSeq FusionScan TCGA_RNA-Seq TIMM17B-PQBP1 TIMM17B chrX 48755349 - PQBP1 chrX 48755212 + Exonic hg19 STAD TCGA-VQ-A8DT 3 5'UTR-5'UTR Intra-chr p11.23 p11.23 Seq+ 14627 ChimerSeq FusionScan TCGA_RNA-Seq MECOM-LRRC34 MECOM chr3 169098974 - LRRC34 chr3 169521969 - Exonic hg19 STAD TCGA-VQ-A8DT 3 In-Frame Intra-chr q26.2 Transcription factor q26.2 Seq+ 14628 ChimerSeq FusionScan TCGA_RNA-Seq SMURF1-CDK14 SMURF1 chr7 98658221 - CDK14 chr7 90675211 + Exonic hg19 STAD TCGA-BR-8484 15 Out-of-Frame Intra-chr q21.13 Seq+ 14629 ChimerSeq FusionScan TCGA_RNA-Seq TRRAP-ANKIB1 TRRAP chr7 98582667 + ANKIB1 chr7 91924202 + Exonic hg19 STAD TCGA-BR-8484 4 CDS-5'UTR Intra-chr q22.1 Atypical:PIKK Oncogene q21.2 Seq+ 14630 ChimerSeq FusionScan TCGA_RNA-Seq PCGF3-HTT PCGF3 chr4 738476 + HTT chr4 3136127 + Exonic hg19 STAD TCGA-BR-8484 3 In-Frame Intra-chr p16.3 p16.3 Seq+ 14631 ChimerSeq FusionScan TCGA_RNA-Seq BRI3-BAIAP2L1 BRI3 chr7 97911765 + BAIAP2L1 chr7 97923423 - Exonic hg19 STAD TCGA-BR-8484 2 Out-of-Frame Intra-chr q21.3 q22.1 14632 ChimerSeq FusionScan TCGA_RNA-Seq SMURF1-CDK14 SMURF1 chr7 98659421 - CDK14 chr7 90675211 + Exonic hg19 STAD TCGA-BR-8484 2 Out-of-Frame Intra-chr q21.13 Seq+ 14633 ChimerSeq FusionScan TCGA_RNA-Seq PYROXD2-RNF128 PYROXD2 chr10 100174765 - RNF128 chrX 106016142 + Exonic hg19 STAD TCGA-BR-8484 2 In-Frame Inter-chr q24.2 q22.3 14634 ChimerSeq FusionScan TCGA_RNA-Seq SMURF1-CDK14 SMURF1 chr7 98658221 - CDK14 chr7 90741856 + Exonic hg19 STAD TCGA-BR-8484 2 In-Frame Intra-chr q21.13 Seq+ 14635 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902190 - TPTE chr21 10987877 - Exonic hg19 STAD TCGA-D7-A6F0 7 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 14636 ChimerSeq FusionScan TCGA_RNA-Seq ENSA-CTSS ENSA chr1 150599942 - CTSS chr1 150727626 - Exonic hg19 STAD TCGA-D7-A6F0 7 In-Frame Intra-chr q21.3 q21.3 Seq+ 14637 ChimerSeq FusionScan TCGA_RNA-Seq PPP6R3-RHOD PPP6R3 chr11 68272717 + RHOD chr11 66833366 + Exonic hg19 STAD TCGA-D7-A6F0 5 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 14638 ChimerSeq FusionScan TCGA_RNA-Seq CRADD-MRPL42 CRADD chr12 94072848 + MRPL42 chr12 93894951 + Exonic hg19 STAD TCGA-D7-A6F0 4 Out-of-Frame Intra-chr q22 q22 Seq+ 14639 ChimerSeq FusionScan TCGA_RNA-Seq KAZN-TMEM51 KAZN chr1 15287371 + TMEM51 chr1 15536985 + Exonic hg19 STAD TCGA-D7-A6F0 2 CDS-5'UTR Intra-chr p36.21 p36.21 Seq+ 14640 ChimerSeq FusionScan TCGA_RNA-Seq USP39-ELMOD3 USP39 chr2 85852814 + ELMOD3 chr2 85616873 + Exonic hg19 STAD TCGA-D7-A6F0 2 In-Frame Intra-chr p11.2 p11.2 Seq+ 14641 ChimerSeq FusionScan TCGA_RNA-Seq NT5C2-GNAS NT5C2 chr10 104899162 - GNAS chr20 57470666 + Exonic hg19 STAD TCGA-D7-A6F0 2 In-Frame Inter-chr q24.33 q13.32 Oncogene 14642 ChimerSeq FusionScan TCGA_RNA-Seq TLCD2-GYS1 TLCD2 chr17 1612792 - GYS1 chr19 49490642 - Exonic hg19 STAD TCGA-D7-A6F0 2 In-Frame Inter-chr q13.33 14643 ChimerSeq FusionScan TCGA_RNA-Seq NT5C2-GNAI3 NT5C2 chr10 104899162 - GNAI3 chr1 110116358 + Exonic hg19 STAD TCGA-D7-A6F0 2 In-Frame Inter-chr q24.33 p13.3 14644 ChimerSeq FusionScan TCGA_RNA-Seq ZNF274-UBA7 ZNF274 chr19 58695365 + UBA7 chr3 49846592 - Exonic hg19 STAD TCGA-D7-A6F0 2 In-Frame Inter-chr q13.43 Transcription factor p21.31 14645 ChimerSeq FusionScan TCGA_RNA-Seq EEF1G-GNAS EEF1G chr11 62327072 - GNAS chr20 57478726 + Exonic hg19 STAD TCGA-D7-A6F0 2 3'UTR-3'UTR Inter-chr q12.3 q13.32 Oncogene 14646 ChimerSeq FusionScan TCGA_RNA-Seq TMX2-CTNND1 TMX2 chr11 57505140 + CTNND1 chr11 57561481 + Exonic hg19 STAD TCGA-D7-A6F0 2 Out-of-Frame Intra-chr q12.1 q12.1 Tumor suppressor gene 14647 ChimerSeq FusionScan TCGA_RNA-Seq NEDD4L-ALPK2 NEDD4L chr18 55711940 + ALPK2 chr18 56196470 - Exonic hg19 STAD TCGA-VQ-A8PD 4 Out-of-Frame Intra-chr q21.31 Tumor suppressor gene q21.32 Seq+ 14648 ChimerSeq FusionScan TCGA_RNA-Seq HBS1L-SCAF8 HBS1L chr6 135375786 - SCAF8 chr6 155095122 + Exonic hg19 STAD TCGA-VQ-A8PD 2 Out-of-Frame Intra-chr q23.3 q25.2 14649 ChimerSeq FusionScan TCGA_RNA-Seq BCL2L2-CAPN8 BCL2L2 chr14 23777408 + CAPN8 chr1 223718212 - Exonic hg19 STAD TCGA-VQ-A8PD 2 In-Frame Inter-chr q11.2 Oncogene q41 14650 ChimerSeq FusionScan TCGA_RNA-Seq C16orf70-ATP6V0D1 C16orf70 chr16 67144142 + ATP6V0D1 chr16 67487618 - Exonic hg19 STAD TCGA-VQ-A8PD 2 In-Frame Intra-chr q22.1 q22.1 14651 ChimerSeq FusionScan TCGA_RNA-Seq SNRNP40-MAP2K5 SNRNP40 chr1 31762100 - MAP2K5 chr15 68040906 + Exonic hg19 STAD TCGA-HU-A4GF 9 In-Frame Inter-chr p35.2 q23 STE:STE7 Seq+ 14652 ChimerSeq FusionScan TCGA_RNA-Seq MTUS1-ASAH1 MTUS1 chr8 17601112 - ASAH1 chr8 17920739 - Exonic hg19 STAD TCGA-HU-A4GF 7 In-Frame Intra-chr p22 Tumor suppressor gene p22 Seq+ 14653 ChimerSeq FusionScan TCGA_RNA-Seq SNRNP40-SPOCD1 SNRNP40 chr1 31754220 - SPOCD1 chr1 32267306 - Exonic hg19 STAD TCGA-HU-A4GF 5 In-Frame Intra-chr p35.2 p35.2 Seq+ 14654 ChimerSeq FusionScan TCGA_RNA-Seq SNRNP40-MAP2K5 SNRNP40 chr1 31762100 - MAP2K5 chr15 68040568 + Exonic hg19 STAD TCGA-HU-A4GF 5 In-Frame Inter-chr p35.2 q23 STE:STE7 Seq+ 14655 ChimerSeq FusionScan TCGA_RNA-Seq SPAST-MEMO1 SPAST chr2 32289315 + MEMO1 chr2 32168452 - Exonic hg19 STAD TCGA-HU-A4GF 4 In-Frame Intra-chr p22.3 p22.3 Seq+ 14656 ChimerSeq FusionScan TCGA_RNA-Seq SNRNP40-SPOCD1 SNRNP40 chr1 31754220 - SPOCD1 chr1 32266218 - Exonic hg19 STAD TCGA-HU-A4GF 3 In-Frame Intra-chr p35.2 p35.2 Seq+ 14657 ChimerSeq FusionScan TCGA_RNA-Seq GTPBP6-PPP2R3B GTPBP6 chrY 178085 - PPP2R3B chrX 302666 - Exonic hg19 STAD TCGA-HU-A4GF 2 Out-of-Frame Inter-chr p22.33 p22.33 Seq+ 14658 ChimerSeq FusionScan TCGA_RNA-Seq GLB1-ROCK2 GLB1 chr3 33093249 - ROCK2 chr2 11341269 - Exonic hg19 STAD TCGA-HU-A4GF 2 Out-of-Frame Inter-chr p22.3 p25.1 AGC:DMPK 14659 ChimerSeq FusionScan TCGA_RNA-Seq YAP1-WWTR1 YAP1 chr11 102098312 + WWTR1 chr3 149238776 - Exonic hg19 STAD TCGA-HU-A4GF 2 In-Frame Inter-chr q22.1 Tumor suppressor gene q25.1 14660 ChimerSeq FusionScan TCGA_RNA-Seq DENND4A-MEGF11 DENND4A chr15 66084347 - MEGF11 chr15 66420749 - Exonic hg19 STAD TCGA-HU-A4GF 2 5'UTR-5'UTR Intra-chr q22.31 q22.31 Seq+ 14661 ChimerSeq FusionScan TCGA_RNA-Seq IDUA-GAK IDUA chr4 981737 + GAK chr4 864692 - Exonic hg19 STAD TCGA-HU-A4GF 2 In-Frame Intra-chr p16.3 p16.3 Other:NAK 14662 ChimerSeq FusionScan TCGA_RNA-Seq USF2-HPN USF2 chr19 35762044 + HPN chr19 35540193 + Exonic hg19 STAD TCGA-BR-6454 2 In-Frame Intra-chr q13.12 Transcription factor q13.11 14663 ChimerSeq FusionScan TCGA_RNA-Seq SLC39A7-TAF6 SLC39A7 chr6 33168715 + TAF6 chr7 99705246 - Exonic hg19 STAD TCGA-BR-6454 2 3'UTR-3'UTR Inter-chr q22.1 14664 ChimerSeq FusionScan TCGA_RNA-Seq AHCTF1-ATP2B4 AHCTF1 chr1 247076533 - ATP2B4 chr1 203676136 + Exonic hg19 STAD TCGA-RD-A8MV 4 In-Frame Intra-chr q44 Transcription factor q32.1 Seq+ 14665 ChimerSeq FusionScan TCGA_RNA-Seq SGSM3-AGXT2L2 SGSM3 chr22 40766692 + AGXT2L2 chr5 177652430 - Exonic hg19 STAD TCGA-RD-A8MV 2 5'UTR-CDS Inter-chr q13.1 14666 ChimerSeq FusionScan TCGA_RNA-Seq SLC10A7-ANAPC10 SLC10A7 chr4 147425000 - ANAPC10 chr4 145916755 - Exonic hg19 STAD TCGA-RD-A8MV 2 In-Frame Intra-chr q31.22 q31.21 14667 ChimerSeq FusionScan TCGA_RNA-Seq CDK6-LAPTM4B CDK6 chr7 92354939 - LAPTM4B chr8 98817580 + Exonic hg19 STAD TCGA-RD-A8MV 2 In-Frame Inter-chr q21.2 CMGC:CDK Oncogene Tumor suppressor gene q22.1 14668 ChimerSeq FusionScan TCGA_RNA-Seq IPO7-ZNF143 IPO7 chr11 9424918 + ZNF143 chr11 9499936 + Exonic hg19 STAD TCGA-BR-8059 5 In-Frame Intra-chr p15.4 p15.4 Transcription factor Seq+ 14669 ChimerSeq FusionScan TCGA_RNA-Seq CAPZA2-COG5 CAPZA2 chr7 116502704 + COG5 chr7 106964966 - Exonic hg19 STAD TCGA-BR-8059 2 In-Frame Intra-chr q31.2 Seq+ 14670 ChimerSeq FusionScan TCGA_RNA-Seq NET1-TUBAL3 NET1 chr10 5454783 + TUBAL3 chr10 5437438 - Exonic hg19 STAD TCGA-BR-8059 2 Out-of-Frame Intra-chr p15.1 p15.1 Seq+ 14671 ChimerSeq FusionScan TCGA_RNA-Seq UNC50-FBXO31 UNC50 chr2 99225189 + FBXO31 chr16 87393972 - Exonic hg19 STAD TCGA-BR-8059 2 5'UTR-CDS Inter-chr q11.2 q24.2 Tumor suppressor gene 14672 ChimerSeq FusionScan TCGA_RNA-Seq PHF14-OSBPL3 PHF14 chr7 11091407 + OSBPL3 chr7 24903218 - Exonic hg19 STAD TCGA-BR-8059 2 Out-of-Frame Intra-chr p21.3 p15.3 Seq+ 14673 ChimerSeq FusionScan TCGA_RNA-Seq SRM-PGAM5 SRM chr1 11115837 - PGAM5 chr12 133297263 + Exonic hg19 STAD TCGA-BR-8059 2 Out-of-Frame Inter-chr p36.22 TK:Src q24.33 Seq+ 14674 ChimerSeq FusionScan TCGA_RNA-Seq NADK-SNX27 NADK chr1 1711343 - SNX27 chr1 151630710 + Exonic hg19 STAD TCGA-BR-8059 2 5'UTR-CDS Intra-chr p36.33 q21.3 Seq+ 14675 ChimerSeq FusionScan TCGA_RNA-Seq SIPA1-FLNA SIPA1 chr11 65412600 + FLNA chrX 153585991 - Exonic hg19 STAD TCGA-BR-8059 2 Out-of-Frame Inter-chr q13.1 q28 Tumor suppressor gene 14676 ChimerSeq FusionScan TCGA_RNA-Seq TSNARE1-SEPT9 TSNARE1 chr8 143484464 - SEPT9 chr17 75303222 + Exonic hg19 STAD TCGA-BR-8059 2 5'UTR-5'UTR Inter-chr q24.3 14677 ChimerSeq FusionScan TCGA_RNA-Seq B3GALNT1-GTF2I B3GALNT1 chr3 160821214 - GTF2I chr7 74171151 + Exonic hg19 STAD TCGA-D7-8576 2 5'UTR-CDS Inter-chr q26.1 q11.23 Transcription factor 14678 ChimerSeq FusionScan TCGA_RNA-Seq PELI1-ANXA4 PELI1 chr2 64371214 - ANXA4 chr2 70008651 + Exonic hg19 STAD TCGA-D7-8576 2 5'UTR-5'UTR Intra-chr p14 p13.3 Seq+ 14679 ChimerSeq FusionScan TCGA_RNA-Seq RNF123-IP6K1 RNF123 chr3 49727039 + IP6K1 chr3 49785601 - Exonic hg19 STAD TCGA-D7-8576 2 5'UTR-5'UTR Intra-chr p21.31 p21.31 14680 ChimerSeq FusionScan TCGA_RNA-Seq STXBP2-PIDD STXBP2 chr19 7708131 + PIDD chr11 804463 - Exonic hg19 STAD TCGA-D7-8576 2 CDS-5'UTR Inter-chr p13.2 14681 ChimerSeq FusionScan TCGA_RNA-Seq PLCL2-CHSY1 PLCL2 chr3 16926865 + CHSY1 chr15 101775782 - Exonic hg19 STAD TCGA-D7-8576 2 In-Frame Inter-chr q26.3 Seq+ 14682 ChimerSeq FusionScan TCGA_RNA-Seq COL6A2-WDR1 COL6A2 chr21 47536317 + WDR1 chr4 10099515 - Exonic hg19 STAD TCGA-D7-8576 2 Out-of-Frame Inter-chr q22.3 p16.1 14683 ChimerSeq FusionScan TCGA_RNA-Seq NUP50-TRMU NUP50 chr22 45567564 + TRMU chr22 46751340 + Exonic hg19 STAD TCGA-D7-8576 2 In-Frame Intra-chr q13.31 q13.31 14684 ChimerSeq FusionScan TCGA_RNA-Seq EPS8-A2M EPS8 chr12 15942094 - A2M chr12 9225467 - Exonic hg19 STAD TCGA-HU-8249 4 5'UTR-CDS Intra-chr p12.3 p13.31 Seq+ 14685 ChimerSeq FusionScan TCGA_RNA-Seq DCBLD1-PTPN2 DCBLD1 chr6 117866760 + PTPN2 chr18 12859253 - Exonic hg19 STAD TCGA-HU-8249 2 Out-of-Frame Inter-chr q22.1 p11.21 Tumor suppressor gene 14686 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD11-ERGIC2 ANKRD11 chr16 89556652 - ERGIC2 chr12 29524603 - Exonic hg19 STAD TCGA-CD-8524 19 5'UTR-5'UTR Inter-chr q24.3 p11.22 Seq+ 14687 ChimerSeq FusionScan TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5460690 - RNF216 chr7 5681007 - Exonic hg19 STAD TCGA-CD-8524 9 Out-of-Frame Intra-chr p22.1 p22.1 Seq+ 14688 ChimerSeq FusionScan TCGA_RNA-Seq B3GALTL-MRPS35 B3GALTL chr13 31789237 + MRPS35 chr12 27872740 + Exonic hg19 STAD TCGA-CD-8524 8 In-Frame Inter-chr p11.22 Seq+ 14689 ChimerSeq FusionScan TCGA_RNA-Seq LRP5-HSD17B4 LRP5 chr11 68179088 + HSD17B4 chr5 118813111 + Exonic hg19 STAD TCGA-CD-8524 2 In-Frame Inter-chr q13.2 q23.1 14690 ChimerSeq FusionScan TCGA_RNA-Seq TSGA10-GNB1 TSGA10 chr2 99743510 - GNB1 chr1 1749314 - Exonic hg19 STAD TCGA-CD-8524 2 5'UTR-CDS Inter-chr q11.2 p36.33 14691 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1009-C10orf76 KIAA1009 chr6 84922674 - C10orf76 chr10 103649247 - Exonic hg19 STAD TCGA-CD-8524 2 Out-of-Frame Inter-chr q24.32 14692 ChimerSeq FusionScan TCGA_RNA-Seq ARL5A-IL1B ARL5A chr2 152668870 - IL1B chr2 113593821 - Exonic hg19 STAD TCGA-CD-8524 2 CDS-5'UTR Intra-chr q23.3 q14.1 Seq+ 14693 ChimerSeq FusionScan TCGA_RNA-Seq TUBD1-RNFT1 TUBD1 chr17 57970057 - RNFT1 chr17 58040645 - Exonic hg19 STAD TCGA-CD-A4MJ 4 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 14694 ChimerSeq FusionScan TCGA_RNA-Seq MPRIP-NT5M MPRIP chr17 16946285 + NT5M chr17 17209856 + Exonic hg19 STAD TCGA-CD-A4MJ 3 In-Frame Intra-chr p11.2 p11.2 14695 ChimerSeq FusionScan TCGA_RNA-Seq ABCC1-NDE1 ABCC1 chr16 16196574 + NDE1 chr16 15818047 + Exonic hg19 STAD TCGA-CD-A4MJ 2 In-Frame Intra-chr p13.11 Seq+ 14696 ChimerSeq FusionScan TCGA_RNA-Seq SNHG8-FUT8 SNHG8 chr4 119200292 + FUT8 chr14 66135960 + Exonic hg19 STAD TCGA-CD-A4MJ 2 5'UTR-5'UTR Inter-chr q26 q23.3 14697 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-DNM2 RCC1 chr1 28835417 + DNM2 chr19 10939711 + Exonic hg19 STAD TCGA-CD-A4MJ 2 5'UTR-CDS Inter-chr p35.3 p13.2 14698 ChimerSeq FusionScan TCGA_RNA-Seq LGALS3-NCOR2 LGALS3 chr14 55596018 + NCOR2 chr12 124934413 - Exonic hg19 STAD TCGA-CD-A4MJ 2 5'UTR-CDS Inter-chr q22.3 q24.31 14699 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-ANXA2 RCC1 chr1 28834672 + ANXA2 chr15 60656722 - Exonic hg19 STAD TCGA-CD-A4MJ 2 5'UTR-CDS Inter-chr p35.3 q22.2 Seq+ 14700 ChimerSeq FusionScan TCGA_RNA-Seq POM121-ZP3 POM121 chr7 72397501 + ZP3 chr7 76054368 + Exonic hg19 STAD TCGA-CD-A4MJ 2 CDS-5'UTR Intra-chr q11.23 q11.23 14701 ChimerSeq FusionScan TCGA_RNA-Seq C19orf48-ARMC10 C19orf48 chr19 51305473 - ARMC10 chr7 102732923 + Exonic hg19 STAD TCGA-CD-A4MJ 2 5'UTR-CDS Inter-chr q13.33 Tumor suppressor gene 14702 ChimerSeq FusionScan TCGA_RNA-Seq ZEB1-TAOK3 ZEB1 chr10 31608221 + TAOK3 chr12 118651915 - Exonic hg19 STAD TCGA-CD-A4MJ 2 In-Frame Inter-chr p11.22 Transcription factor q24.23 14703 ChimerSeq FusionScan TCGA_RNA-Seq DDX39A-KLK6 DDX39A chr19 14530081 - KLK6 chr19 51471847 - Exonic hg19 STAD TCGA-CD-A4MJ 2 5'UTR-5'UTR Intra-chr p13.12 q13.41 Tumor suppressor gene 14704 ChimerSeq FusionScan TCGA_RNA-Seq PACS2-MTCH1 PACS2 chr14 105849850 + MTCH1 chr6 36936750 - Exonic hg19 STAD TCGA-CD-A4MJ 2 Out-of-Frame Inter-chr q32.33 p21.2 14705 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-KLHL20 RCC1 chr1 28834672 + KLHL20 chr1 173720902 + Exonic hg19 STAD TCGA-CD-A4MJ 2 5'UTR-CDS Intra-chr p35.3 q25.1 14706 ChimerSeq FusionScan TCGA_RNA-Seq HIBCH-NAB1 HIBCH chr2 191184441 - NAB1 chr2 191523883 + Exonic hg19 STAD TCGA-CD-A4MJ 2 CDS-5'UTR Intra-chr q32.2 q32.2 14707 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-ITGB4 RCC1 chr1 28832596 + ITGB4 chr17 73723274 + Exonic hg19 STAD TCGA-CD-A4MJ 2 5'UTR-CDS Inter-chr p35.3 q25.1 14708 ChimerSeq FusionScan TCGA_RNA-Seq FAM120A-VAPA FAM120A chr9 96233669 + VAPA chr18 9936106 + Exonic hg19 STAD TCGA-CD-A4MJ 2 In-Frame Inter-chr q22.31 p11.22 14709 ChimerSeq FusionScan TCGA_RNA-Seq IST1-ATXN1L IST1 chr16 71929492 + ATXN1L chr16 71917019 + Exonic hg19 STAD TCGA-IN-A6RS 7 5'UTR-5'UTR Intra-chr q22.2 q22.2 14710 ChimerSeq FusionScan TCGA_RNA-Seq ERLIN1-FBXW4 ERLIN1 chr10 101945270 - FBXW4 chr10 103436193 - Exonic hg19 STAD TCGA-IN-A6RS 3 In-Frame Intra-chr q24.31 q24.32 14711 ChimerSeq FusionScan TCGA_RNA-Seq TTLL5-EIF2B2 TTLL5 chr14 76286504 + EIF2B2 chr14 75474424 + Exonic hg19 STAD TCGA-IN-A6RS 3 Out-of-Frame Intra-chr q24.3 q24.3 Seq+ 14712 ChimerSeq FusionScan TCGA_RNA-Seq CLIP2-LIMK1 CLIP2 chr7 73704064 + LIMK1 chr7 73500077 + Exonic hg19 STAD TCGA-IN-A6RS 3 5'UTR-CDS Intra-chr q11.23 q11.23 TKL:LISK Seq+ 14713 ChimerSeq FusionScan TCGA_RNA-Seq SRP54-MAEA SRP54 chr14 35452421 + MAEA chr4 1305766 + Exonic hg19 STAD TCGA-IN-A6RS 3 5'UTR-CDS Inter-chr q13.2 p16.3 14714 ChimerSeq FusionScan TCGA_RNA-Seq ABT1-EIF3G ABT1 chr6 26597451 + EIF3G chr19 10226750 - Exonic hg19 STAD TCGA-IN-A6RS 2 In-Frame Inter-chr p22.2 p13.2 14715 ChimerSeq FusionScan TCGA_RNA-Seq SMAD6-GNAS SMAD6 chr15 67008836 + GNAS chr20 57470666 + Exonic hg19 STAD TCGA-IN-A6RS 2 In-Frame Inter-chr q22.31 q13.32 Oncogene 14716 ChimerSeq FusionScan TCGA_RNA-Seq PSMD1-SUCLA2 PSMD1 chr2 232011070 + SUCLA2 chr13 48528692 - Exonic hg19 STAD TCGA-IN-A6RS 2 Out-of-Frame Inter-chr q37.1 q14.2 14717 ChimerSeq FusionScan TCGA_RNA-Seq PRDM10-ZBTB44 PRDM10 chr11 129872616 - ZBTB44 chr11 130109791 - Exonic hg19 STAD TCGA-IN-A6RS 2 5'UTR-CDS Intra-chr q24.3 Transcription factor q24.3 Transcription factor 14718 ChimerSeq FusionScan TCGA_RNA-Seq MBP-PSMB1 MBP chr18 74844535 - PSMB1 chr6 170858201 - Exonic hg19 STAD TCGA-IN-A6RS 2 5'UTR-CDS Inter-chr q23 14719 ChimerSeq FusionScan TCGA_RNA-Seq ITGA6-THADA ITGA6 chr2 173362828 + THADA chr2 43460021 - Exonic hg19 STAD TCGA-CD-5813 3 Out-of-Frame Intra-chr q31.1 p21 Seq+ 14720 ChimerSeq FusionScan TCGA_RNA-Seq HPCAL1-CYS1 HPCAL1 chr2 10443303 + CYS1 chr2 10206083 - Exonic hg19 STAD TCGA-CD-5813 3 5'UTR-CDS Intra-chr p25.1 p25.1 Seq+ 14721 ChimerSeq FusionScan TCGA_RNA-Seq SPARCL1-RPL35A SPARCL1 chr4 88414733 - RPL35A chr3 197677806 + Exonic hg19 STAD TCGA-CD-5813 3 CDS-5'UTR Inter-chr q22.1 Tumor suppressor gene q29 Seq+ 14722 ChimerSeq FusionScan TCGA_RNA-Seq CCDC82-RNF111 CCDC82 chr11 96123007 - RNF111 chr15 59376327 + Exonic hg19 STAD TCGA-CD-5813 2 5'UTR-CDS Inter-chr q21 q22.1 Tumor suppressor gene 14723 ChimerSeq FusionScan TCGA_RNA-Seq RNF13-SELT RNF13 chr3 149589941 + SELT chr3 150340171 + Exonic hg19 STAD TCGA-CD-5813 2 Out-of-Frame Intra-chr q25.1 14724 ChimerSeq FusionScan TCGA_RNA-Seq ADAM17-ITGB1BP1 ADAM17 chr2 9675962 - ITGB1BP1 chr2 9548334 - Exonic hg19 STAD TCGA-CD-5813 2 In-Frame Intra-chr p25.1 p25.1 Seq+ 14725 ChimerSeq FusionScan TCGA_RNA-Seq SEPT11-FAM198B SEPT11 chr4 77917692 + FAM198B chr4 159052164 - Exonic hg19 STAD TCGA-BR-7715 17 Out-of-Frame Intra-chr q21.1 q32.1 Seq+ 14726 ChimerSeq FusionScan TCGA_RNA-Seq NAA15-MGST2 NAA15 chr4 140222985 + MGST2 chr4 140661365 + Exonic hg19 STAD TCGA-BR-7715 16 CDS-3'UTR Intra-chr q31.1 q31.1 Seq+ 14727 ChimerSeq FusionScan TCGA_RNA-Seq PIN4-HDAC8 PIN4 chrX 71416754 + HDAC8 chrX 71571688 - Exonic hg19 STAD TCGA-BR-7715 9 In-Frame Intra-chr q13.1 q13.1 Seq+ 14728 ChimerSeq FusionScan TCGA_RNA-Seq TM9SF4-TPX2 TM9SF4 chr20 30697558 + TPX2 chr20 30345209 + Exonic hg19 STAD TCGA-BR-7715 5 CDS-5'UTR Intra-chr q11.21 q11.21 Seq+ 14729 ChimerSeq FusionScan TCGA_RNA-Seq ZNRF2P2-DPY19L1 ZNRF2P2 chr7 29724387 - DPY19L1 chr7 34989510 - Exonic hg19 STAD TCGA-BR-7715 4 3'UTR-CDS Intra-chr p14.3 p14.2 14730 ChimerSeq FusionScan TCGA_RNA-Seq RAD21-EIF3H RAD21 chr8 117878824 - EIF3H chr8 117738411 - Exonic hg19 STAD TCGA-BR-7715 3 In-Frame Intra-chr q24.11 q24.11 Seq+ 14731 ChimerSeq FusionScan TCGA_RNA-Seq SLC7A5P1-SMG1 SLC7A5P1 chr16 29624423 - SMG1 chr16 18908278 - Exonic hg19 STAD TCGA-BR-7715 2 3'UTR-CDS Intra-chr p11.2 p12.3 Atypical:PIKK 14732 ChimerSeq FusionScan TCGA_RNA-Seq TOP1MT-ZC3H3 TOP1MT chr8 144411519 - ZC3H3 chr8 144523290 - Exonic hg19 STAD TCGA-BR-7715 2 In-Frame Intra-chr q24.3 14733 ChimerSeq FusionScan TCGA_RNA-Seq TMX2-CTNND1 TMX2 chr11 57480279 + CTNND1 chr11 57563048 + Exonic hg19 STAD TCGA-BR-7715 2 In-Frame Intra-chr q12.1 q12.1 Tumor suppressor gene 14734 ChimerSeq FusionScan TCGA_RNA-Seq MICAL2-DKK3 MICAL2 chr11 12132273 + DKK3 chr11 12023984 - Exonic hg19 STAD TCGA-BR-7715 2 5'UTR-CDS Intra-chr p15.3 p15.3 Tumor suppressor gene 14735 ChimerSeq FusionScan TCGA_RNA-Seq TM9SF4-TPX2 TM9SF4 chr20 30697558 + TPX2 chr20 30330343 + Exonic hg19 STAD TCGA-BR-7715 2 CDS-5'UTR Intra-chr q11.21 q11.21 Seq+ 14736 ChimerSeq FusionScan TCGA_RNA-Seq RBPJ-UBB RBPJ chr4 26322670 + UBB chr17 16285215 + Exonic hg19 STAD TCGA-D7-5577 2 5'UTR-5'UTR Inter-chr p15.2 Transcription factor p11.2 14737 ChimerSeq FusionScan TCGA_RNA-Seq RNF20-LPPR1 RNF20 chr9 104297834 + LPPR1 chr9 104032161 + Exonic hg19 STAD TCGA-CD-A487 5 In-Frame Intra-chr q31.1 Seq+ 14738 ChimerSeq FusionScan TCGA_RNA-Seq CNOT1-PRRX2 CNOT1 chr16 58619241 - PRRX2 chr9 132481509 + Exonic hg19 STAD TCGA-CD-A487 4 Out-of-Frame Inter-chr q21 q34.11 Transcription factor Seq+ 14739 ChimerSeq FusionScan TCGA_RNA-Seq GRAMD4-TBC1D22A GRAMD4 chr22 47069711 + TBC1D22A chr22 47432966 + Exonic hg19 STAD TCGA-CD-A487 3 In-Frame Intra-chr q13.31 q13.31 Seq+ 14740 ChimerSeq FusionScan TCGA_RNA-Seq GANAB-EEF1D GANAB chr11 62414033 - EEF1D chr8 144669022 - Exonic hg19 STAD TCGA-CD-A487 2 In-Frame Inter-chr q12.3 Tumor suppressor gene 14741 ChimerSeq FusionScan TCGA_RNA-Seq INTS12-PPA2 INTS12 chr4 106629794 - PPA2 chr4 106377902 - Exonic hg19 STAD TCGA-CD-A487 2 5'UTR-CDS Intra-chr q24 q24 Seq+ 14742 ChimerSeq FusionScan TCGA_RNA-Seq SLC7A6-TMCO7 SLC7A6 chr16 68309152 + TMCO7 chr16 69007930 + Exonic hg19 STAD TCGA-CD-A487 2 In-Frame Intra-chr q22.1 14743 ChimerSeq FusionScan TCGA_RNA-Seq SOCS6-S100A10 SOCS6 chr18 67956326 + S100A10 chr1 151958727 - Exonic hg19 STAD TCGA-CD-A487 2 5'UTR-5'UTR Inter-chr q22.2 q21.3 14744 ChimerSeq FusionScan TCGA_RNA-Seq MTIF3-ESD MTIF3 chr13 28019224 - ESD chr13 47367579 - Exonic hg19 STAD TCGA-BR-6566 2 5'UTR-5'UTR Intra-chr q12.2 q14.2 14745 ChimerSeq FusionScan TCGA_RNA-Seq C1orf159-UBE2J2 C1orf159 chr1 1051439 - UBE2J2 chr1 1203372 - Exonic hg19 STAD TCGA-BR-6566 2 5'UTR-5'UTR Intra-chr p36.33 p36.33 14746 ChimerSeq FusionScan TCGA_RNA-Seq NOMO1-NDE1 NOMO1 chr16 14983072 + NDE1 chr16 15790565 + Exonic hg19 STAD TCGA-BR-6566 2 In-Frame Intra-chr p13.11 14747 ChimerSeq FusionScan TCGA_RNA-Seq CSNK2A1-RPS27A CSNK2A1 chr20 508576 - RPS27A chr2 55459943 + Exonic hg19 STAD TCGA-BR-6566 2 5'UTR-5'UTR Inter-chr p13 Oncogene p16.1 14748 ChimerSeq FusionScan TCGA_RNA-Seq ANO10-COX8A ANO10 chr3 43663400 - COX8A chr11 63743696 + Exonic hg19 STAD TCGA-BR-6566 2 5'UTR-CDS Inter-chr p21.33 q13.1 14749 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-IL1R2 RCC1 chr1 28832596 + IL1R2 chr2 102640994 + Exonic hg19 STAD TCGA-BR-6566 2 5'UTR-CDS Inter-chr p35.3 q11.2 14750 ChimerSeq FusionScan TCGA_RNA-Seq KDM4C-DENND1A KDM4C chr9 7049200 + DENND1A chr9 126414402 - Exonic hg19 STAD TCGA-FP-A9TM 2 In-Frame Intra-chr p24.1 q33.3 14751 ChimerSeq FusionScan TCGA_RNA-Seq ZER1-PTPN18 ZER1 chr9 131533859 - PTPN18 chr2 131116439 + Exonic hg19 STAD TCGA-FP-A9TM 2 5'UTR-CDS Inter-chr q34.11 q21.1 14752 ChimerSeq FusionScan TCGA_RNA-Seq PPA2-ARFIP1 PPA2 chr4 106367539 - ARFIP1 chr4 153784757 + Exonic hg19 STAD TCGA-HU-A4HB 3 In-Frame Intra-chr q24 q31.3 Seq+ 14753 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC7-TMBIM6 ZCCHC7 chr9 37126939 + TMBIM6 chr12 50146246 + Exonic hg19 STAD TCGA-HU-A4HB 2 Out-of-Frame Inter-chr p13.2 q13.12 14754 ChimerSeq FusionScan TCGA_RNA-Seq SPOP-TFDP2 SPOP chr17 47755294 - TFDP2 chr3 141724386 - Exonic hg19 STAD TCGA-HU-A4HB 2 5'UTR-5'UTR Inter-chr q21.33 Oncogene Tumor suppressor gene q23 Transcription factor Seq+ 14755 ChimerSeq FusionScan TCGA_RNA-Seq LRP1B-HNMT LRP1B chr2 142237964 - HNMT chr2 138758487 + Exonic hg19 STAD TCGA-BR-8364 2 In-Frame Intra-chr q22.2 Oncogene Tumor suppressor gene q22.1 14756 ChimerSeq FusionScan TCGA_RNA-Seq CYB5R4-KIAA1009 CYB5R4 chr6 84574047 + KIAA1009 chr6 84836231 - Exonic hg19 STAD TCGA-BR-8364 2 Out-of-Frame Intra-chr q14.2 Seq+ 14757 ChimerSeq FusionScan TCGA_RNA-Seq CUL3-RWDD3 CUL3 chr2 225449660 - RWDD3 chr1 95712311 + Exonic hg19 STAD TCGA-BR-8364 2 Out-of-Frame Inter-chr q36.2 p21.3 14758 ChimerSeq FusionScan TCGA_RNA-Seq NEK9-EPC1 NEK9 chr14 75562074 - EPC1 chr10 32562209 - Exonic hg19 STAD TCGA-BR-8364 2 In-Frame Inter-chr q24.3 Other:NEK p11.22 Seq+ 14759 ChimerSeq FusionScan TCGA_RNA-Seq STK38L-APP STK38L chr12 27397265 + APP chr21 27284274 - Exonic hg19 STAD TCGA-BR-8364 2 5'UTR-CDS Inter-chr p11.23 q21.3 Seq+ 14760 ChimerSeq FusionScan TCGA_RNA-Seq C20orf94-SETBP1 C20orf94 chr20 10438879 + SETBP1 chr18 42449194 + Exonic hg19 STAD TCGA-BR-8364 2 In-Frame Inter-chr q12.3 Oncogene Transcription factor 14761 ChimerSeq FusionScan TCGA_RNA-Seq LRRFIP2-HN1 LRRFIP2 chr3 37100280 - HN1 chr17 73132345 - Exonic hg19 STAD TCGA-BR-8364 2 In-Frame Inter-chr p22.2 Seq+ 14762 ChimerSeq FusionScan TCGA_RNA-Seq FKBP5-HERPUD2 FKBP5 chr6 35656580 - HERPUD2 chr7 35712888 - Exonic hg19 STAD TCGA-BR-8364 2 5'UTR-CDS Inter-chr p21.31 p14.2 14763 ChimerSeq FusionScan TCGA_RNA-Seq QRICH1-FBXW12 QRICH1 chr3 49114141 - FBXW12 chr3 48414797 + Exonic hg19 STAD TCGA-BR-8364 2 In-Frame Intra-chr p21.31 p21.31 Seq+ 14764 ChimerSeq FusionScan TCGA_RNA-Seq KBTBD4-NDUFS3 KBTBD4 chr11 47600379 - NDUFS3 chr11 47600820 + Exonic hg19 STAD TCGA-BR-8364 2 5'UTR-CDS Intra-chr p11.2 p11.2 14765 ChimerSeq FusionScan TCGA_RNA-Seq FAM192A-CCDC102A FAM192A chr16 57219732 - CCDC102A chr16 57555088 - Exonic hg19 STAD TCGA-CG-4475 2 5'UTR-CDS Intra-chr q13 q21 Seq+ 14766 ChimerSeq FusionScan TCGA_RNA-Seq LMO7-MGAT5 LMO7 chr13 76335174 + MGAT5 chr2 135095829 + Exonic hg19 STAD TCGA-D7-6817 8 Out-of-Frame Inter-chr q22.2 q21.2 14767 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D5-OXNAD1 TBC1D5 chr3 17665340 - OXNAD1 chr3 16310632 + Exonic hg19 STAD TCGA-D7-6817 3 5'UTR-5'UTR Intra-chr p24.3 p25.1 14768 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D5-OXNAD1 TBC1D5 chr3 17603510 - OXNAD1 chr3 16310632 + Exonic hg19 STAD TCGA-D7-6817 2 5'UTR-5'UTR Intra-chr p24.3 p25.1 14769 ChimerSeq FusionScan TCGA_RNA-Seq TOP2A-SMARCE1 TOP2A chr17 38556123 - SMARCE1 chr17 38793824 - Exonic hg19 STAD TCGA-HF-7134 3 Out-of-Frame Intra-chr q21.2 q21.2 Seq+ 14770 ChimerSeq FusionScan TCGA_RNA-Seq ZNF480-ELL ZNF480 chr19 52819215 + ELL chr19 18572662 - Exonic hg19 STAD TCGA-HF-7134 2 In-Frame Intra-chr q13.41 Transcription factor p13.11 14771 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPH3-SLC29A3 HNRNPH3 chr10 70099312 + SLC29A3 chr10 73121710 + Exonic hg19 STAD TCGA-FP-8631 10 Out-of-Frame Intra-chr q21.3 q22.1 Seq+ 14772 ChimerSeq FusionScan TCGA_RNA-Seq UBE2R2-ACO1 UBE2R2 chr9 33817932 + ACO1 chr9 32440462 + Exonic hg19 STAD TCGA-FP-8631 9 In-Frame Intra-chr p13.3 p21.1 Seq+ 14773 ChimerSeq FusionScan TCGA_RNA-Seq PITPNA-LLGL2 PITPNA chr17 1451589 - LLGL2 chr17 73564556 + Exonic hg19 STAD TCGA-FP-8631 4 In-Frame Intra-chr p13.3 q25.1 Seq+ 14774 ChimerSeq FusionScan TCGA_RNA-Seq UBE2R2-ACO1 UBE2R2 chr9 33817932 + ACO1 chr9 32448893 + Exonic hg19 STAD TCGA-FP-8631 3 In-Frame Intra-chr p13.3 p21.1 Seq+ 14775 ChimerSeq FusionScan TCGA_RNA-Seq AGRN-MXI1 AGRN chr1 970704 + MXI1 chr10 111987946 + Exonic hg19 STAD TCGA-FP-8631 3 In-Frame Inter-chr p36.33 q25.2 Tumor suppressor gene Transcription factor 14776 ChimerSeq FusionScan TCGA_RNA-Seq NFIX-VDR NFIX chr19 13136366 + VDR chr12 48276557 - Exonic hg19 STAD TCGA-FP-8631 3 In-Frame Inter-chr p13.13 Transcription factor q13.11 Tumor suppressor gene Transcription factor Seq+ 14777 ChimerSeq FusionScan TCGA_RNA-Seq CTPS1-NFYC CTPS1 chr1 41474386 + NFYC chr1 41213205 + Exonic hg19 STAD TCGA-FP-8631 3 In-Frame Intra-chr p34.2 p34.2 Transcription factor Seq+ 14778 ChimerSeq FusionScan TCGA_RNA-Seq SLC9A8-PTGIS SLC9A8 chr20 48439678 + PTGIS chr20 48124601 - Exonic hg19 STAD TCGA-FP-8631 3 Out-of-Frame Intra-chr q13.13 q13.13 Seq+ 14779 ChimerSeq FusionScan TCGA_RNA-Seq SBNO2-GAMT SBNO2 chr19 1154182 - GAMT chr19 1397498 - Exonic hg19 STAD TCGA-FP-8631 3 In-Frame Intra-chr p13.3 p13.3 Seq+ 14780 ChimerSeq FusionScan TCGA_RNA-Seq ENSA-CTSS ENSA chr1 150598117 - CTSS chr1 150737240 - Exonic hg19 STAD TCGA-FP-8631 2 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 14781 ChimerSeq FusionScan TCGA_RNA-Seq TTC8-RALGAPA1 TTC8 chr14 89291165 + RALGAPA1 chr14 36041924 - Exonic hg19 STAD TCGA-FP-8631 2 In-Frame Intra-chr q31.3 q13.2 14782 ChimerSeq FusionScan TCGA_RNA-Seq SLC6A9-OMA1 SLC6A9 chr1 44466438 - OMA1 chr1 59004982 - Exonic hg19 STAD TCGA-FP-8631 2 CDS-5'UTR Intra-chr p34.1 p32.1 14783 ChimerSeq FusionScan TCGA_RNA-Seq NFIX-VDR NFIX chr19 13136366 + VDR chr12 48272898 - Exonic hg19 STAD TCGA-FP-8631 2 In-Frame Inter-chr p13.13 Transcription factor q13.11 Tumor suppressor gene Transcription factor Seq+ 14784 ChimerSeq FusionScan TCGA_RNA-Seq TGIF2-MYO9A TGIF2 chr20 35207369 + MYO9A chr15 72338975 - Exonic hg19 STAD TCGA-FP-8631 2 CDS-5'UTR Inter-chr q11.23 Transcription factor q23 14785 ChimerSeq FusionScan TCGA_RNA-Seq VCL-ADK VCL chr10 75758133 + ADK chr10 76153898 + Exonic hg19 STAD TCGA-FP-8631 2 In-Frame Intra-chr q22.2 q22.2 Seq+ 14786 ChimerSeq FusionScan TCGA_RNA-Seq C21orf58-AGFG2 C21orf58 chr21 47737121 - AGFG2 chr7 100151715 + Exonic hg19 STAD TCGA-FP-8631 2 Out-of-Frame Inter-chr q22.3 q22.1 14787 ChimerSeq FusionScan TCGA_RNA-Seq CHMP6-BAIAP2 CHMP6 chr17 78972220 + BAIAP2 chr17 79073727 + Exonic hg19 STAD TCGA-FP-8631 2 Out-of-Frame Intra-chr q25.3 q25.3 14788 ChimerSeq FusionScan TCGA_RNA-Seq C7orf60-ADAMTS14 C7orf60 chr7 112579645 - ADAMTS14 chr10 72489049 + Exonic hg19 STAD TCGA-FP-8631 2 Out-of-Frame Inter-chr q22.1 Seq+ 14789 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D5-DAZL TBC1D5 chr3 17783972 - DAZL chr3 16640105 - Exonic hg19 STAD TCGA-IN-A6RR 3 5'UTR-CDS Intra-chr p24.3 p24.3 14790 ChimerSeq FusionScan TCGA_RNA-Seq CHD1-MAST4 CHD1 chr5 98195675 - MAST4 chr5 66282271 + Exonic hg19 STAD TCGA-IN-A6RR 2 Out-of-Frame Intra-chr q21.1 Tumor suppressor gene q12.3 AGC:MAST 14791 ChimerSeq FusionScan TCGA_RNA-Seq ERMP1-VAMP7 ERMP1 chr9 5797816 - VAMP7 chrX 155169364 + Exonic hg19 STAD TCGA-IN-A6RR 2 CDS-5'UTR Inter-chr p24.1 q28 14792 ChimerSeq FusionScan TCGA_RNA-Seq LARGE-IRF2BP2 LARGE chr22 33733631 - IRF2BP2 chr1 234743598 - Exonic hg19 STAD TCGA-IN-A6RR 2 Out-of-Frame Inter-chr q42.3 14793 ChimerSeq FusionScan TCGA_RNA-Seq EGFR-ERBB3 EGFR chr7 55087058 + ERBB3 chr12 56492542 + Exonic hg19 STAD TCGA-CD-A486 7 In-Frame Inter-chr p11.2 TK:EGFR Oncogene q13.2 Oncogene 14794 ChimerSeq FusionScan TCGA_RNA-Seq SMAD3-IL17RA SMAD3 chr15 67358698 + IL17RA chr22 17577951 + Exonic hg19 STAD TCGA-CD-A486 7 Out-of-Frame Inter-chr q22.33 Transcription factor q11.1 Seq+ 14795 ChimerSeq FusionScan TCGA_RNA-Seq EP300-TNRC6B EP300 chr22 41489102 + TNRC6B chr22 40642018 + Exonic hg19 STAD TCGA-CD-A486 7 Out-of-Frame Intra-chr q13.2 Oncogene q13.1 Seq+ 14796 ChimerSeq FusionScan TCGA_RNA-Seq MINK1-SPNS3 MINK1 chr17 4736935 + SPNS3 chr17 4381866 + Exonic hg19 STAD TCGA-CD-A486 6 In-Frame Intra-chr p13.2 p13.2 Seq+ 14797 ChimerSeq FusionScan TCGA_RNA-Seq HBP1-SLC26A5 HBP1 chr7 106809472 + SLC26A5 chr7 103019782 - Exonic hg19 STAD TCGA-CD-A486 4 In-Frame Intra-chr Tumor suppressor gene Transcription factor q22.1 Seq+ 14798 ChimerSeq FusionScan TCGA_RNA-Seq PNISR-ASCC3 PNISR chr6 99873090 - ASCC3 chr6 101054964 - Exonic hg19 STAD TCGA-CD-A486 3 5'UTR-CDS Intra-chr q16.2 q16.3 Seq+ 14799 ChimerSeq FusionScan TCGA_RNA-Seq CASC3-CDK12 CASC3 chr17 38297860 + CDK12 chr17 37680926 + Exonic hg19 STAD TCGA-CD-A486 3 Out-of-Frame Intra-chr q21.1 q12 Oncogene Seq+ 14800 ChimerSeq FusionScan TCGA_RNA-Seq TRAPPC10-AGPAT3 TRAPPC10 chr21 45432441 + AGPAT3 chr21 45397926 + Exonic hg19 STAD TCGA-CD-A486 3 Out-of-Frame Intra-chr q22.3 q22.3 Seq+ 14801 ChimerSeq FusionScan TCGA_RNA-Seq UBE2Q2-FBXO22 UBE2Q2 chr15 76136187 + FBXO22 chr15 76205543 + Exonic hg19 STAD TCGA-CD-A486 2 In-Frame Intra-chr q24.2 q24.2 14802 ChimerSeq FusionScan TCGA_RNA-Seq PLXDC2-AKAP13 PLXDC2 chr10 20106120 + AKAP13 chr15 86225388 + Exonic hg19 STAD TCGA-CD-A486 2 In-Frame Inter-chr p12.31 q25.3 14803 ChimerSeq FusionScan TCGA_RNA-Seq LMNA-DAP3 LMNA chr1 156052975 + DAP3 chr1 155707947 + Exonic hg19 STAD TCGA-CD-A486 2 5'UTR-CDS Intra-chr q22 q22 Seq+ 14804 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D22B-MRPL2 TBC1D22B chr6 37237426 + MRPL2 chr6 43025971 - Exonic hg19 STAD TCGA-FP-7735 3 Out-of-Frame Intra-chr p21.2 p21.1 14805 ChimerSeq FusionScan TCGA_RNA-Seq SORBS1-PTK7 SORBS1 chr10 97321076 - PTK7 chr6 43096714 + Exonic hg19 STAD TCGA-FP-7735 2 5'UTR-CDS Inter-chr q24.1 p21.1 14806 ChimerSeq FusionScan TCGA_RNA-Seq TRIM52-SFSWAP TRIM52 chr5 180687001 - SFSWAP chr12 132209949 + Exonic hg19 STAD TCGA-RD-A8NB 2 In-Frame Inter-chr q35.3 q24.33 14807 ChimerSeq FusionScan TCGA_RNA-Seq XRCC6-SREBF2 XRCC6 chr22 42033795 + SREBF2 chr22 42262834 + Exonic hg19 STAD TCGA-RD-A8NB 2 Out-of-Frame Intra-chr q13.2 q13.2 Transcription factor Seq+ 14808 ChimerSeq FusionScan TCGA_RNA-Seq TULP4-WDR27 TULP4 chr6 158882761 + WDR27 chr6 169857729 - Exonic hg19 STAD TCGA-D7-6520 7 In-Frame Intra-chr q25.3 q27 Seq+ 14809 ChimerSeq FusionScan TCGA_RNA-Seq CERS6-NOSTRIN CERS6 chr2 169313128 + NOSTRIN chr2 169690736 + Exonic hg19 STAD TCGA-D7-6520 5 Out-of-Frame Intra-chr q24.3 Seq+ 14810 ChimerSeq FusionScan TCGA_RNA-Seq GRAMD4-IL2RB GRAMD4 chr22 47033857 + IL2RB chr22 37540245 - Exonic hg19 STAD TCGA-D7-6520 3 CDS-5'UTR Intra-chr q13.31 q12.3 Seq+ 14811 ChimerSeq FusionScan TCGA_RNA-Seq SLC11A2-SQSTM1 SLC11A2 chr12 51402258 - SQSTM1 chr5 179260586 + Exonic hg19 STAD TCGA-D7-6520 2 In-Frame Inter-chr q13.12 q35.3 14812 ChimerSeq FusionScan TCGA_RNA-Seq CROCC-NBPF3 CROCC chr1 17265637 + NBPF3 chr1 21771440 + Exonic hg19 STAD TCGA-D7-6520 2 CDS-5'UTR Intra-chr p36.13 p36.12 14813 ChimerSeq FusionScan TCGA_RNA-Seq CCZ1-IRAK2 CCZ1 chr7 5940563 + IRAK2 chr3 10280431 + Exonic hg19 STAD TCGA-D7-6520 2 In-Frame Inter-chr p22.1 p25.3 TKL:IRAK 14814 ChimerSeq FusionScan TCGA_RNA-Seq ACADM-SEC16B ACADM chr1 76190502 + SEC16B chr1 177921130 - Exonic hg19 STAD TCGA-D7-6520 2 Out-of-Frame Intra-chr p31.1 q25.2 14815 ChimerSeq FusionScan TCGA_RNA-Seq STAT2-C6orf48 STAT2 chr12 56753841 - C6orf48 chr6 31803187 + Exonic hg19 STAD TCGA-D7-6520 2 5'UTR-3'UTR Inter-chr q13.3 Transcription factor 14816 ChimerSeq FusionScan TCGA_RNA-Seq C12orf26-XRN2 C12orf26 chr12 82752603 + XRN2 chr20 21362631 + Exonic hg19 STAD TCGA-BR-A4J7 3 In-Frame Inter-chr p11.22 14817 ChimerSeq FusionScan TCGA_RNA-Seq NARS2-GAB4 NARS2 chr11 78152136 - GAB4 chr22 17473066 - Exonic hg19 STAD TCGA-BR-A4J7 2 Out-of-Frame Inter-chr q14.1 q11.1 14818 ChimerSeq FusionScan TCGA_RNA-Seq NTN1-STX8 NTN1 chr17 8926708 + STX8 chr17 9281970 - Exonic hg19 STAD TCGA-BR-A4J7 2 In-Frame Intra-chr p13.1 p13.1 Seq+ 14819 ChimerSeq FusionScan TCGA_RNA-Seq EIF3H-WDR27 EIF3H chr8 117738254 - WDR27 chr6 169857729 - Exonic hg19 STAD TCGA-BR-A4J7 2 Out-of-Frame Inter-chr q24.11 q27 14820 ChimerSeq FusionScan TCGA_RNA-Seq COG8-TERF2 COG8 chr16 69373078 - TERF2 chr16 69391464 - Exonic hg19 STAD TCGA-BR-A4IZ 7 Out-of-Frame Intra-chr q22.1 q22.1 Transcription factor Seq+ 14821 ChimerSeq FusionScan TCGA_RNA-Seq COL6A1-PRDM2 COL6A1 chr21 47407568 + PRDM2 chr1 14099572 + Exonic hg19 STAD TCGA-BR-A4IZ 2 Out-of-Frame Inter-chr q22.3 p36.21 Tumor suppressor gene Transcription factor 14822 ChimerSeq FusionScan TCGA_RNA-Seq TCF7L2-C10orf76 TCF7L2 chr10 114711366 + C10orf76 chr10 103649247 - Exonic hg19 STAD TCGA-BR-A4IZ 2 Out-of-Frame Intra-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q24.32 14823 ChimerSeq FusionScan TCGA_RNA-Seq FDPS-KHSRP FDPS chr1 155282186 + KHSRP chr19 6422447 - Exonic hg19 STAD TCGA-BR-A4IZ 2 In-Frame Inter-chr q22 p13.3 14824 ChimerSeq FusionScan TCGA_RNA-Seq WDR75-GPBP1L1 WDR75 chr2 190320170 + GPBP1L1 chr1 46106075 - Exonic hg19 STAD TCGA-BR-A4IZ 2 Out-of-Frame Inter-chr q32.2 p34.1 Transcription factor 14825 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-KAT2A ERBB2 chr17 37872192 + KAT2A chr17 40267053 - Exonic hg19 STAD TCGA-BR-A4IZ 2 Out-of-Frame Intra-chr q12 Oncogene q21.2 14826 ChimerSeq FusionScan TCGA_RNA-Seq TRAF2-CAPN2 TRAF2 chr9 139794124 + CAPN2 chr1 223946971 + Exonic hg19 STAD TCGA-BR-A4IZ 2 In-Frame Inter-chr q34.3 Tumor suppressor gene q41 14827 ChimerSeq FusionScan TCGA_RNA-Seq MTSS1-OPA1 MTSS1 chr8 125711766 - OPA1 chr3 193372650 + Exonic hg19 STAD TCGA-BR-A4IZ 2 Out-of-Frame Inter-chr q24.13 Tumor suppressor gene q29 14828 ChimerSeq FusionScan TCGA_RNA-Seq CTDSP2-RAP1B CTDSP2 chr12 58240154 - RAP1B chr12 69053059 + Exonic hg19 STAD TCGA-F1-A72C 2 CDS-3'UTR Intra-chr q14.1 q15 14829 ChimerSeq FusionScan TCGA_RNA-Seq MACF1-RPL9 MACF1 chr1 39926466 + RPL9 chr4 39458158 - Exonic hg19 STAD TCGA-F1-A72C 2 Out-of-Frame Inter-chr p34.3 p14 14830 ChimerSeq FusionScan TCGA_RNA-Seq INO80-NDUFA1 INO80 chr15 41408170 - NDUFA1 chrX 119007266 + Exonic hg19 STAD TCGA-F1-A72C 2 5'UTR-CDS Inter-chr q15.1 q24 14831 ChimerSeq FusionScan TCGA_RNA-Seq ATP8B1-SERPINB6 ATP8B1 chr18 55470229 - SERPINB6 chr6 2959576 - Exonic hg19 STAD TCGA-F1-A72C 2 5'UTR-5'UTR Inter-chr q21.31 p25.2 14832 ChimerSeq FusionScan TCGA_RNA-Seq ATP5B-IVNS1ABP ATP5B chr12 57037186 - IVNS1ABP chr1 185274775 - Exonic hg19 STAD TCGA-F1-A72C 2 In-Frame Inter-chr q13.3 q25.3 14833 ChimerSeq FusionScan TCGA_RNA-Seq RNF115-PDZK1 RNF115 chr1 145663367 + PDZK1 chr1 145747041 + Exonic hg19 STAD TCGA-F1-A72C 2 CDS-5'UTR Intra-chr q21.1 q21.1 Seq+ 14834 ChimerSeq FusionScan TCGA_RNA-Seq JMJD1C-CLPX JMJD1C chr10 65024410 - CLPX chr15 65459123 - Exonic hg19 STAD TCGA-F1-A72C 2 Out-of-Frame Inter-chr q21.3 q22.31 14835 ChimerSeq FusionScan TCGA_RNA-Seq SH3PXD2B-RPL18A SH3PXD2B chr5 171833280 - RPL18A chr19 17973726 + Exonic hg19 STAD TCGA-F1-A72C 2 In-Frame Inter-chr q35.1 p13.11 14836 ChimerSeq FusionScan TCGA_RNA-Seq LARP4-BAIAP2L2 LARP4 chr12 50824353 + BAIAP2L2 chr22 38494489 - Exonic hg19 STAD TCGA-F1-A72C 2 Out-of-Frame Inter-chr q13.12 q13.1 14837 ChimerSeq FusionScan TCGA_RNA-Seq MED24-TBC1D3F MED24 chr17 38209550 - TBC1D3F chr17 36285543 + Exonic hg19 STAD TCGA-FP-A8CX 14 CDS-5'UTR Intra-chr q21.1 q12 14838 ChimerSeq FusionScan TCGA_RNA-Seq RAVER1-C19orf6 RAVER1 chr19 10439317 - C19orf6 chr19 1014472 - Exonic hg19 STAD TCGA-FP-A8CX 3 In-Frame Intra-chr p13.2 Seq+ 14839 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-ETHE1 CPSF6 chr12 69633486 + ETHE1 chr19 44015718 - Exonic hg19 STAD TCGA-FP-A8CX 2 In-Frame Inter-chr q15 q13.31 14840 ChimerSeq FusionScan TCGA_RNA-Seq PTPRF-PSMD3 PTPRF chr1 44054671 + PSMD3 chr17 38146346 + Exonic hg19 STAD TCGA-FP-A8CX 2 In-Frame Inter-chr p34.2 q21.1 14841 ChimerSeq FusionScan TCGA_RNA-Seq LRRIQ4-MIEN1 LRRIQ4 chr3 169540729 + MIEN1 chr17 37886544 - Exonic hg19 STAD TCGA-FP-A8CX 2 Out-of-Frame Inter-chr q26.2 q12 Seq+ 14842 ChimerSeq FusionScan TCGA_RNA-Seq TAOK1-SSH2 TAOK1 chr17 27718042 + SSH2 chr17 28120955 - Exonic hg19 STAD TCGA-FP-A8CX 2 5'UTR-CDS Intra-chr q11.2 q11.2 14843 ChimerSeq FusionScan TCGA_RNA-Seq TMC5-DDX19B TMC5 chr16 19441962 + DDX19B chr16 70358487 + Exonic hg19 STAD TCGA-FP-A8CX 2 5'UTR-5'UTR Intra-chr p12.3 q22.1 14844 ChimerSeq FusionScan TCGA_RNA-Seq NT5DC1-C11orf49 NT5DC1 chr6 116439108 + C11orf49 chr11 47159195 + Exonic hg19 STAD TCGA-SW-A7EB 2 In-Frame Inter-chr q22.1 p11.2 14845 ChimerSeq FusionScan TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57697534 + VMP1 chr17 57886156 + Exonic hg19 STAD TCGA-IN-A6RL 5 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 14846 ChimerSeq FusionScan TCGA_RNA-Seq VCL-ADK VCL chr10 75758133 + ADK chr10 76429940 + Exonic hg19 STAD TCGA-IN-A6RL 3 Out-of-Frame Intra-chr q22.2 q22.2 Seq+ 14847 ChimerSeq FusionScan TCGA_RNA-Seq SSH2-C17orf64 SSH2 chr17 28256955 - C17orf64 chr17 58503143 + Exonic hg19 STAD TCGA-IN-A6RL 2 In-Frame Intra-chr q11.2 q23.2 14848 ChimerSeq FusionScan TCGA_RNA-Seq RAD21-EIF3H RAD21 chr8 117886849 - EIF3H chr8 117738411 - Exonic hg19 STAD TCGA-IN-A6RL 2 5'UTR-CDS Intra-chr q24.11 q24.11 Seq+ 14849 ChimerSeq FusionScan TCGA_RNA-Seq HIBADH-ST7 HIBADH chr7 27702316 - ST7 chr7 116759614 + Exonic hg19 STAD TCGA-IN-A6RL 2 Out-of-Frame Intra-chr p15.2 q31.2 Tumor suppressor gene 14850 ChimerSeq FusionScan TCGA_RNA-Seq ALDH2-HAUS7 ALDH2 chr12 112223150 + HAUS7 chrX 152713367 - Exonic hg19 STAD TCGA-IN-A6RL 2 Out-of-Frame Inter-chr q24.12 q28 14851 ChimerSeq FusionScan TCGA_RNA-Seq UBE2V1-TSHZ2 UBE2V1 chr20 48729643 - TSHZ2 chr20 52103682 + Exonic hg19 STAD TCGA-CG-4476 8 3'UTR-3'UTR Intra-chr q13.13 q13.2 Transcription factor Seq+ 14852 ChimerSeq FusionScan TCGA_RNA-Seq NIN-PVT1 NIN chr14 51273454 - PVT1 chr8 129108763 + Exonic hg19 STAD TCGA-BR-6453 2 CDS-5'UTR Inter-chr q22.1 Oncogene q24.21 14853 ChimerSeq FusionScan TCGA_RNA-Seq PIAS1-DTNBP1 PIAS1 chr15 68379088 + DTNBP1 chr6 15533626 - Exonic hg19 STAD TCGA-BR-6453 2 In-Frame Inter-chr q23 Tumor suppressor gene p22.3 14854 ChimerSeq FusionScan TCGA_RNA-Seq ASAH1-PCM1 ASAH1 chr8 17924728 - PCM1 chr8 17872092 + Exonic hg19 STAD TCGA-BR-6453 2 In-Frame Intra-chr p22 p22 14855 ChimerSeq FusionScan TCGA_RNA-Seq ANP32A-CPNE1 ANP32A chr15 69113036 - CPNE1 chr20 34220845 - Exonic hg19 STAD TCGA-BR-6453 2 In-Frame Inter-chr q23 Tumor suppressor gene q11.22 14856 ChimerSeq FusionScan TCGA_RNA-Seq ANO7-MGAT4A ANO7 chr2 242157796 + MGAT4A chr2 99343030 - Exonic hg19 STAD TCGA-BR-6453 2 CDS-5'UTR Intra-chr q37.3 q11.2 14857 ChimerSeq FusionScan TCGA_RNA-Seq DGKD-LAPTM5 DGKD chr2 234299129 + LAPTM5 chr1 31215396 - Exonic hg19 STAD TCGA-BR-6453 2 In-Frame Inter-chr p35.2 14858 ChimerSeq FusionScan TCGA_RNA-Seq ATP5D-NRGN ATP5D chr19 1241990 + NRGN chr11 124616299 + Exonic hg19 STAD TCGA-BR-4292 4 CDS-3'UTR Inter-chr p13.3 q24.2 14859 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-KIF23 RCC1 chr1 28832596 + KIF23 chr15 69728476 + Exonic hg19 STAD TCGA-BR-4292 3 5'UTR-CDS Inter-chr p35.3 q23 14860 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-NPEPPS RCC1 chr1 28832596 + NPEPPS chr17 45697102 + Exonic hg19 STAD TCGA-BR-4292 2 5'UTR-CDS Inter-chr p35.3 q21.32 14861 ChimerSeq FusionScan TCGA_RNA-Seq ZNF562-ANXA2 ZNF562 chr19 9770054 - ANXA2 chr15 60646412 - Exonic hg19 STAD TCGA-BR-4292 2 In-Frame Inter-chr p13.2 Transcription factor q22.2 14862 ChimerSeq FusionScan TCGA_RNA-Seq C19orf33-SYNPO2 C19orf33 chr19 38795326 + SYNPO2 chr4 119944584 + Exonic hg19 STAD TCGA-BR-4292 2 In-Frame Inter-chr q13.2 q26 Tumor suppressor gene 14863 ChimerSeq FusionScan TCGA_RNA-Seq COMMD4-ABHD2 COMMD4 chr15 75628433 + ABHD2 chr15 89656955 + Exonic hg19 STAD TCGA-BR-4292 2 CDS-5'UTR Intra-chr q24.2 q26.1 14864 ChimerSeq FusionScan TCGA_RNA-Seq RAB40C-TMEM8A RAB40C chr16 640433 + TMEM8A chr16 427848 - Exonic hg19 STAD TCGA-BR-4292 2 In-Frame Intra-chr p13.3 p13.3 14865 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-ATP5D RCC1 chr1 28832596 + ATP5D chr19 1244095 + Exonic hg19 STAD TCGA-BR-4292 2 5'UTR-CDS Inter-chr p35.3 p13.3 14866 ChimerSeq FusionScan TCGA_RNA-Seq SNHG8-MAP2K1 SNHG8 chr4 119200292 + MAP2K1 chr15 66774092 + Exonic hg19 STAD TCGA-BR-4292 2 5'UTR-CDS Inter-chr q26 q22.31 STE:STE7 Oncogene 14867 ChimerSeq FusionScan TCGA_RNA-Seq RPS5-EEF2 RPS5 chr19 58905962 + EEF2 chr19 3980707 - Exonic hg19 STAD TCGA-BR-4292 2 5'UTR-CDS Intra-chr q13.43 p13.3 14868 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-EEF1D RCC1 chr1 28834672 + EEF1D chr8 144669022 - Exonic hg19 STAD TCGA-BR-4292 2 5'UTR-5'UTR Inter-chr p35.3 Seq+ 14869 ChimerSeq FusionScan TCGA_RNA-Seq PPP3CA-METAP1 PPP3CA chr4 102267895 - METAP1 chr4 99950017 + Exonic hg19 STAD TCGA-BR-4292 2 Out-of-Frame Intra-chr q24 q23 14870 ChimerSeq FusionScan TCGA_RNA-Seq SPICE1-DHRS11 SPICE1 chr3 113225353 - DHRS11 chr17 34951400 + Exonic hg19 STAD TCGA-BR-4292 2 In-Frame Inter-chr q13.2 14871 ChimerSeq FusionScan TCGA_RNA-Seq FAM110A-CORO1C FAM110A chr20 814594 + CORO1C chr12 109095099 - Exonic hg19 STAD TCGA-BR-4292 2 5'UTR-5'UTR Inter-chr p13 q24.11 14872 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-ARHGAP12 RCC1 chr1 28832596 + ARHGAP12 chr10 32099675 - Exonic hg19 STAD TCGA-BR-4292 2 5'UTR-CDS Inter-chr p35.3 p11.22 14873 ChimerSeq FusionScan TCGA_RNA-Seq ECSIT-PRDX2 ECSIT chr19 11623870 - PRDX2 chr19 12907980 - Exonic hg19 STAD TCGA-BR-4292 2 Out-of-Frame Intra-chr p13.2 p13.13 14874 ChimerSeq FusionScan TCGA_RNA-Seq GLCE-UBB GLCE chr15 69453096 + UBB chr17 16285215 + Exonic hg19 STAD TCGA-BR-4292 2 5'UTR-5'UTR Inter-chr q23 p11.2 14875 ChimerSeq FusionScan TCGA_RNA-Seq TRA2A-TYW1 TRA2A chr7 23555981 - TYW1 chr7 66648112 + Exonic hg19 STAD TCGA-CG-4443 4 In-Frame Intra-chr p15.3 q11.21 14876 ChimerSeq FusionScan TCGA_RNA-Seq RRBP1-SNX5 RRBP1 chr20 17662672 - SNX5 chr20 17937681 - Exonic hg19 STAD TCGA-CG-4443 3 5'UTR-CDS Intra-chr p12.1 p11.23 Seq+ 14877 ChimerSeq FusionScan TCGA_RNA-Seq SIPA1L3-PTOV1 SIPA1L3 chr19 38633350 + PTOV1 chr19 50357662 + Exonic hg19 STAD TCGA-CG-4443 3 Out-of-Frame Intra-chr q13.13 q13.33 Seq+ 14878 ChimerSeq FusionScan TCGA_RNA-Seq STK16-PLCD4 STK16 chr2 220112479 + PLCD4 chr2 219496858 + Exonic hg19 STAD TCGA-CG-4443 2 In-Frame Intra-chr q35 q35 Seq+ 14879 ChimerSeq FusionScan TCGA_RNA-Seq IPO11-KIF2A IPO11 chr5 61733244 + KIF2A chr5 61669513 + Exonic hg19 STAD TCGA-CG-4443 2 Out-of-Frame Intra-chr q12.1 q12.1 Seq+ 14880 ChimerSeq FusionScan TCGA_RNA-Seq EGFR-RCL1 EGFR chr7 55087058 + RCL1 chr9 4849446 + Exonic hg19 STAD TCGA-BR-6706 4 Out-of-Frame Inter-chr p11.2 TK:EGFR Oncogene p24.1 Seq+ 14881 ChimerSeq FusionScan TCGA_RNA-Seq GAS6-GTPBP4 GAS6 chr13 114566547 - GTPBP4 chr10 1060186 + Exonic hg19 STAD TCGA-BR-6706 2 In-Frame Inter-chr q34 Oncogene p15.3 Tumor suppressor gene 14882 ChimerSeq FusionScan TCGA_RNA-Seq SLC12A7-VOPP1 SLC12A7 chr5 1111982 - VOPP1 chr7 55560111 - Exonic hg19 STAD TCGA-BR-6706 2 Out-of-Frame Inter-chr p15.33 p11.2 14883 ChimerSeq FusionScan TCGA_RNA-Seq CCDC102A-EPN1 CCDC102A chr16 57562504 - EPN1 chr19 56196761 + Exonic hg19 STAD TCGA-BR-6706 2 In-Frame Inter-chr q21 q13.42 14884 ChimerSeq FusionScan TCGA_RNA-Seq RABGAP1L-DHX9 RABGAP1L chr1 174363283 + DHX9 chr1 182835578 + Exonic hg19 STAD TCGA-BR-6706 2 In-Frame Intra-chr q25.1 q25.3 14885 ChimerSeq FusionScan TCGA_RNA-Seq CD274-KDM4C CD274 chr9 5465606 + KDM4C chr9 6792971 + Exonic hg19 STAD TCGA-BR-6706 2 In-Frame Intra-chr p24.1 Oncogene p24.1 14886 ChimerSeq FusionScan TCGA_RNA-Seq ZFYVE28-POLN ZFYVE28 chr4 2355659 - POLN chr4 2074756 - Exonic hg19 STAD TCGA-HF-A5NB 9 Out-of-Frame Intra-chr p16.3 p16.3 Seq+ 14887 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175394270 - Exonic hg19 STAD TCGA-HF-A5NB 4 5'UTR-CDS Inter-chr q21.1 q35.2 14888 ChimerSeq FusionScan TCGA_RNA-Seq SCAMP1-ARSB SCAMP1 chr5 77745857 + ARSB chr5 78135249 - Exonic hg19 STAD TCGA-HF-A5NB 4 Out-of-Frame Intra-chr q14.1 q14.1 Seq+ 14889 ChimerSeq FusionScan TCGA_RNA-Seq SCAMP1-ARSB SCAMP1 chr5 77717784 + ARSB chr5 78135249 - Exonic hg19 STAD TCGA-HF-A5NB 3 In-Frame Intra-chr q14.1 q14.1 Seq+ 14890 ChimerSeq FusionScan TCGA_RNA-Seq EEF1D-PIP5K1C EEF1D chr8 144679517 - PIP5K1C chr19 3648706 - Exonic hg19 STAD TCGA-HF-A5NB 2 5'UTR-CDS Inter-chr p13.3 14891 ChimerSeq FusionScan TCGA_RNA-Seq SMG7-IL32 SMG7 chr1 183523328 + IL32 chr16 3117377 + Exonic hg19 STAD TCGA-HF-A5NB 2 3'UTR-CDS Inter-chr q25.3 p13.3 14892 ChimerSeq FusionScan TCGA_RNA-Seq RNF123-CROCC RNF123 chr3 49728680 + CROCC chr1 17263131 + Exonic hg19 STAD TCGA-HF-A5NB 2 Out-of-Frame Inter-chr p21.31 p36.13 14893 ChimerSeq FusionScan TCGA_RNA-Seq REG4-XPO7 REG4 chr1 120354031 - XPO7 chr8 21853002 + Exonic hg19 STAD TCGA-HF-A5NB 2 5'UTR-CDS Inter-chr p12 p21.3 14894 ChimerSeq FusionScan TCGA_RNA-Seq REG4-MRPL24 REG4 chr1 120354031 - MRPL24 chr1 156708556 - Exonic hg19 STAD TCGA-HF-A5NB 2 5'UTR-5'UTR Intra-chr p12 q23.1 14895 ChimerSeq FusionScan TCGA_RNA-Seq GALNT13-LAPTM4A GALNT13 chr2 154728816 + LAPTM4A chr2 20240772 - Exonic hg19 STAD TCGA-HF-A5NB 2 5'UTR-CDS Intra-chr q23.3 p24.1 14896 ChimerSeq FusionScan TCGA_RNA-Seq UHRF1BP1L-DEPDC4 UHRF1BP1L chr12 100451348 - DEPDC4 chr12 100650004 - Exonic hg19 STAD TCGA-HF-A5NB 2 In-Frame Intra-chr q23.1 q23.1 Seq+ 14897 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-KANSL2 RCC1 chr1 28834672 + KANSL2 chr12 49048843 - Exonic hg19 STAD TCGA-HF-A5NB 2 5'UTR-CDS Inter-chr p35.3 q13.11 14898 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC3-STK24 DNAJC3 chr13 96377506 + STK24 chr13 99118815 - Exonic hg19 STAD TCGA-HF-A5NB 2 In-Frame Intra-chr q32.1 q32.2 14899 ChimerSeq FusionScan TCGA_RNA-Seq UBR5-VPS13B UBR5 chr8 103424400 - VPS13B chr8 100836059 + Exonic hg19 STAD TCGA-HF-A5NB 2 Out-of-Frame Intra-chr q22.3 Oncogene q22.2 14900 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-ACOT7 RPL22 chr1 6252989 - ACOT7 chr1 6324755 - Exonic hg19 STAD TCGA-BR-A452 37 Out-of-Frame Intra-chr p36.31 p36.31 Seq+ 14901 ChimerSeq FusionScan TCGA_RNA-Seq TMED10-MLH3 TMED10 chr14 75614366 - MLH3 chr14 75505115 - Exonic hg19 STAD TCGA-BR-A452 11 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene Seq+ 14902 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF12-POU2F3 ARHGEF12 chr11 120207984 + POU2F3 chr11 120139918 + Exonic hg19 STAD TCGA-BR-A452 6 Out-of-Frame Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene Transcription factor Seq+ 14903 ChimerSeq FusionScan TCGA_RNA-Seq ZDHHC5-CTNND1 ZDHHC5 chr11 57456137 + CTNND1 chr11 57582865 + Exonic hg19 STAD TCGA-BR-A452 6 Out-of-Frame Intra-chr q12.1 q12.1 Tumor suppressor gene Seq+ 14904 ChimerSeq FusionScan TCGA_RNA-Seq DEAF1-CHID1 DEAF1 chr11 674535 - CHID1 chr11 870499 - Exonic hg19 STAD TCGA-BR-A452 5 Out-of-Frame Intra-chr Transcription factor p15.5 Seq+ 14905 ChimerSeq FusionScan TCGA_RNA-Seq ADAM9-LETM2 ADAM9 chr8 38854679 + LETM2 chr8 38245467 + Exonic hg19 STAD TCGA-BR-A452 4 5'UTR-5'UTR Intra-chr p11.23 Seq+ 14906 ChimerSeq FusionScan TCGA_RNA-Seq TMED10-MLH3 TMED10 chr14 75614366 - MLH3 chr14 75506718 - Exonic hg19 STAD TCGA-BR-A452 3 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene Seq+ 14907 ChimerSeq FusionScan TCGA_RNA-Seq ASAH1-HGSNAT ASAH1 chr8 17933049 - HGSNAT chr8 43054530 + Exonic hg19 STAD TCGA-BR-A452 2 Out-of-Frame Intra-chr p22 p11.21 14908 ChimerSeq FusionScan TCGA_RNA-Seq TRPC4AP-CPNE1 TRPC4AP chr20 33680416 - CPNE1 chr20 34220845 - Exonic hg19 STAD TCGA-BR-A452 2 In-Frame Intra-chr q11.22 q11.22 14909 ChimerSeq FusionScan TCGA_RNA-Seq TSPAN14-FAM213A TSPAN14 chr10 82249070 + FAM213A chr10 82180221 + Exonic hg19 STAD TCGA-BR-A452 2 CDS-5'UTR Intra-chr q23.1 q23.1 Seq+ 14910 ChimerSeq FusionScan TCGA_RNA-Seq ASH1L-SYT11 ASH1L chr1 155490890 - SYT11 chr1 155850290 + Exonic hg19 STAD TCGA-BR-A452 2 In-Frame Intra-chr q22 Transcription factor q22 14911 ChimerSeq FusionScan TCGA_RNA-Seq AAK1-RFWD2 AAK1 chr2 69870009 - RFWD2 chr1 175996824 - Exonic hg19 STAD TCGA-BR-A452 2 In-Frame Inter-chr p13.3 Other:NAK q25.2 Tumor suppressor gene 14912 ChimerSeq FusionScan TCGA_RNA-Seq MTX2-ZNF121 MTX2 chr2 177193113 + ZNF121 chr19 9677785 - Exonic hg19 STAD TCGA-BR-A452 2 In-Frame Inter-chr q31.1 p13.2 Transcription factor 14913 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF12-POU2F3 ARHGEF12 chr11 120207984 + POU2F3 chr11 120168973 + Exonic hg19 STAD TCGA-BR-A452 2 Out-of-Frame Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene Transcription factor Seq+ 14914 ChimerSeq FusionScan TCGA_RNA-Seq MYOM3-IL28RA MYOM3 chr1 24392380 - IL28RA chr1 24488174 - Exonic hg19 STAD TCGA-BR-A452 2 Out-of-Frame Intra-chr p36.11 14915 ChimerSeq FusionScan TCGA_RNA-Seq SLC35E2B-PWWP2A SLC35E2B chr1 1599765 - PWWP2A chr5 159521072 - Exonic hg19 STAD TCGA-BR-A452 2 In-Frame Inter-chr p36.33 q33.3 14916 ChimerSeq FusionScan TCGA_RNA-Seq SCARB1-AACS SCARB1 chr12 125348140 - AACS chr12 125599022 + Exonic hg19 STAD TCGA-BR-A452 2 In-Frame Intra-chr q24.31 q24.31 14917 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0907-UBQLN4 KIAA0907 chr1 155896466 - UBQLN4 chr1 156014014 - Exonic hg19 STAD TCGA-BR-A452 2 In-Frame Intra-chr q22 q22 Seq+ 14918 ChimerSeq FusionScan TCGA_RNA-Seq UBE4A-PRRC2A UBE4A chr11 118243381 + PRRC2A chr6 31591508 + Exonic hg19 STAD TCGA-BR-A452 2 In-Frame Inter-chr q23.3 14919 ChimerSeq FusionScan TCGA_RNA-Seq SMEK1-FBLN5 SMEK1 chr14 91975849 - FBLN5 chr14 92361416 - Exonic hg19 STAD TCGA-BR-A4QI 21 In-Frame Intra-chr q32.12 Seq+ 14920 ChimerSeq FusionScan TCGA_RNA-Seq CCND3-EHMT2 CCND3 chr6 42016238 - EHMT2 chr6 31848625 - Exonic hg19 STAD TCGA-BR-A4QI 17 5'UTR-CDS Intra-chr p21.1 Seq+ 14921 ChimerSeq FusionScan TCGA_RNA-Seq ATF7IP-VIPR2 ATF7IP chr12 14634119 + VIPR2 chr7 158824560 - Exonic hg19 STAD TCGA-BR-A4QI 12 Out-of-Frame Inter-chr p13.1 q36.3 Seq+ 14922 ChimerSeq FusionScan TCGA_RNA-Seq TAOK1-PROCA1 TAOK1 chr17 27718042 + PROCA1 chr17 27031861 - Exonic hg19 STAD TCGA-BR-A4QI 9 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 14923 ChimerSeq FusionScan TCGA_RNA-Seq LTBP1-YIPF4 LTBP1 chr2 33413918 + YIPF4 chr2 32526450 + Exonic hg19 STAD TCGA-BR-A4QI 9 In-Frame Intra-chr p22.3 p22.3 Seq+ 14924 ChimerSeq FusionScan TCGA_RNA-Seq DMD-NR0B1 DMD chrX 31222077 - NR0B1 chrX 30322940 - Exonic hg19 STAD TCGA-BR-A4QI 9 Out-of-Frame Intra-chr p21.1 Tumor suppressor gene p21.2 Transcription factor Seq+ 14925 ChimerSeq FusionScan TCGA_RNA-Seq CTAGE5-MIPOL1 CTAGE5 chr14 39796226 + MIPOL1 chr14 38016109 + Exonic hg19 STAD TCGA-BR-A4QI 7 Out-of-Frame Intra-chr q21.1 q13.3 Seq+ 14926 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPC-CHD8 HNRNPC chr14 21698477 - CHD8 chr14 21854335 - Exonic hg19 STAD TCGA-BR-A4QI 7 Out-of-Frame Intra-chr q11.2 q11.2 Seq+ 14927 ChimerSeq FusionScan TCGA_RNA-Seq ZNF416-C19orf18 ZNF416 chr19 58089424 - C19orf18 chr19 58478000 - Exonic hg19 STAD TCGA-BR-A4QI 7 Out-of-Frame Intra-chr q13.43 Transcription factor q13.43 Seq+ 14928 ChimerSeq FusionScan TCGA_RNA-Seq ZNF416-C19orf18 ZNF416 chr19 58089424 - C19orf18 chr19 58472919 - Exonic hg19 STAD TCGA-BR-A4QI 6 Out-of-Frame Intra-chr q13.43 Transcription factor q13.43 Seq+ 14929 ChimerSeq FusionScan TCGA_RNA-Seq PPP5C-IGFL3 PPP5C chr19 46857246 + IGFL3 chr19 46627578 - Exonic hg19 STAD TCGA-BR-A4QI 6 Out-of-Frame Intra-chr q13.32 q13.32 Seq+ 14930 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD11-FANCA ANKRD11 chr16 89484691 - FANCA chr16 89838222 - Exonic hg19 STAD TCGA-BR-A4QI 6 5'UTR-CDS Intra-chr q24.3 q24.3 Oncogene Seq+ 14931 ChimerSeq FusionScan TCGA_RNA-Seq GOLGA4-MLH1 GOLGA4 chr3 37360685 + MLH1 chr3 37061800 + Exonic hg19 STAD TCGA-BR-A4QI 6 Out-of-Frame Intra-chr p22.2 p22.2 Oncogene Tumor suppressor gene Seq+ 14932 ChimerSeq FusionScan TCGA_RNA-Seq HEXDC-NPLOC4 HEXDC chr17 80386521 + NPLOC4 chr17 79539114 - Exonic hg19 STAD TCGA-BR-A4QI 5 In-Frame Intra-chr q25.3 q25.3 Seq+ 14933 ChimerSeq FusionScan TCGA_RNA-Seq CCND3-EHMT2 CCND3 chr6 42016238 - EHMT2 chr6 31848041 - Exonic hg19 STAD TCGA-BR-A4QI 5 5'UTR-CDS Intra-chr p21.1 Seq+ 14934 ChimerSeq FusionScan TCGA_RNA-Seq DICER1-CLMN DICER1 chr14 95623566 - CLMN chr14 95663031 - Exonic hg19 STAD TCGA-BR-A4QI 5 5'UTR-CDS Intra-chr q32.13 Oncogene Tumor suppressor gene q32.13 Seq+ 14935 ChimerSeq FusionScan TCGA_RNA-Seq CD276-C15orf60 CD276 chr15 73976801 + C15orf60 chr15 73843278 + Exonic hg19 STAD TCGA-BR-A4QI 5 5'UTR-CDS Intra-chr q24.1 Seq+ 14936 ChimerSeq FusionScan TCGA_RNA-Seq IFT43-TTLL5 IFT43 chr14 76488737 + TTLL5 chr14 76349027 + Exonic hg19 STAD TCGA-BR-A4QI 5 Out-of-Frame Intra-chr q24.3 q24.3 Seq+ 14937 ChimerSeq FusionScan TCGA_RNA-Seq GNG12-DIRAS3 GNG12 chr1 68299026 - DIRAS3 chr1 68513045 - Exonic hg19 STAD TCGA-BR-A4QI 4 5'UTR-5'UTR Intra-chr p31.3 p31.3 Tumor suppressor gene Seq+ 14938 ChimerSeq FusionScan TCGA_RNA-Seq MIDN-HMHA1 MIDN chr19 1251900 + HMHA1 chr19 1079701 + Exonic hg19 STAD TCGA-BR-A4QI 4 In-Frame Intra-chr p13.3 Seq+ 14939 ChimerSeq FusionScan TCGA_RNA-Seq ATF7IP-VIPR2 ATF7IP chr12 14634119 + VIPR2 chr7 158824758 - Exonic hg19 STAD TCGA-BR-A4QI 4 Out-of-Frame Inter-chr p13.1 q36.3 Seq+ 14940 ChimerSeq FusionScan TCGA_RNA-Seq NGRN-ZNF774 NGRN chr15 90809630 + ZNF774 chr15 90897873 + Exonic hg19 STAD TCGA-BR-A4QI 4 5'UTR-5'UTR Intra-chr q26.1 q26.1 Transcription factor 14941 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP26-PCDHA8 ARHGAP26 chr5 142150480 + PCDHA8 chr5 140358533 + Exonic hg19 STAD TCGA-BR-A4QI 3 Out-of-Frame Intra-chr q31.3 q31.3 14942 ChimerSeq FusionScan TCGA_RNA-Seq SBNO2-C19orf26 SBNO2 chr19 1174170 - C19orf26 chr19 1236120 - Exonic hg19 STAD TCGA-BR-A4QI 3 5'UTR-5'UTR Intra-chr p13.3 Seq+ 14943 ChimerSeq FusionScan TCGA_RNA-Seq BIRC6-SOS1 BIRC6 chr2 32800433 + SOS1 chr2 39284007 - Exonic hg19 STAD TCGA-BR-A4QI 3 Out-of-Frame Intra-chr p22.3 p22.1 Seq+ 14944 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D15-LGR5 TBC1D15 chr12 72233591 + LGR5 chr12 71918185 + Exonic hg19 STAD TCGA-BR-A4QI 3 Out-of-Frame Intra-chr q21.1 q21.1 Seq+ 14945 ChimerSeq FusionScan TCGA_RNA-Seq LPCAT1-MRPL36 LPCAT1 chr5 1488505 - MRPL36 chr5 1799061 - Exonic hg19 STAD TCGA-BR-A4QI 3 CDS-5'UTR Intra-chr p15.33 Seq+ 14946 ChimerSeq FusionScan TCGA_RNA-Seq CALML4-PIAS1 CALML4 chr15 68497582 - PIAS1 chr15 68473549 + Exonic hg19 STAD TCGA-BR-A4QI 3 Out-of-Frame Intra-chr q23 q23 Tumor suppressor gene 14947 ChimerSeq FusionScan TCGA_RNA-Seq UEVLD-SPTY2D1 UEVLD chr11 18610159 - SPTY2D1 chr11 18638536 - Exonic hg19 STAD TCGA-BR-A4QI 3 In-Frame Intra-chr p15.1 p15.1 Seq+ 14948 ChimerSeq FusionScan TCGA_RNA-Seq FAF1-EPS15 FAF1 chr1 51323600 - EPS15 chr1 51946986 - Exonic hg19 STAD TCGA-BR-A4QI 3 In-Frame Intra-chr p32.3 p32.3 Seq+ 14949 ChimerSeq FusionScan TCGA_RNA-Seq PTPRE-TACC2 PTPRE chr10 129705573 + TACC2 chr10 123976141 + Exonic hg19 STAD TCGA-BR-A4QI 2 5'UTR-CDS Intra-chr q26.2 q26.13 Seq+ 14950 ChimerSeq FusionScan TCGA_RNA-Seq PTPRE-TACC2 PTPRE chr10 129780560 + TACC2 chr10 123974905 + Exonic hg19 STAD TCGA-BR-A4QI 2 5'UTR-CDS Intra-chr q26.2 q26.13 Seq+ 14951 ChimerSeq FusionScan TCGA_RNA-Seq EIF3G-DMKN EIF3G chr19 10229343 - DMKN chr19 35988583 - Exonic hg19 STAD TCGA-BR-A4QI 2 CDS-3'UTR Intra-chr p13.2 q13.12 14952 ChimerSeq FusionScan TCGA_RNA-Seq LYN-SHB LYN chr8 56792662 + SHB chr9 37974834 - Exonic hg19 STAD TCGA-BR-A4QI 2 5'UTR-CDS Inter-chr q12.1 TK:Src p13.1 Seq+ 14953 ChimerSeq FusionScan TCGA_RNA-Seq DENND1B-C1orf27 DENND1B chr1 197741997 - C1orf27 chr1 186375214 + Exonic hg19 STAD TCGA-BR-A4QI 2 In-Frame Intra-chr q31.3 q31.1 Seq+ 14954 ChimerSeq FusionScan TCGA_RNA-Seq PIGN-SERPINB5 PIGN chr18 59828365 - SERPINB5 chr18 61160185 + Exonic hg19 STAD TCGA-BR-A4QI 2 Out-of-Frame Intra-chr q21.33 q21.33 Tumor suppressor gene 14955 ChimerSeq FusionScan TCGA_RNA-Seq WDR44-BCR WDR44 chrX 117480543 + BCR chr22 23626163 + Exonic hg19 STAD TCGA-BR-A4QI 2 Out-of-Frame Inter-chr q24 q11.23 Atypical:BCR Oncogene Tumor suppressor gene 14956 ChimerSeq FusionScan TCGA_RNA-Seq PTPRE-TACC2 PTPRE chr10 129705573 + TACC2 chr10 123974905 + Exonic hg19 STAD TCGA-BR-A4QI 2 5'UTR-CDS Intra-chr q26.2 q26.13 Seq+ 14957 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-SUPT4H1 RCC1 chr1 28834672 + SUPT4H1 chr17 56424945 - Exonic hg19 STAD TCGA-BR-A4QI 2 5'UTR-CDS Inter-chr p35.3 q22 Seq+ 14958 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0586-ARID4A KIAA0586 chr14 58927878 + ARID4A chr14 58813128 + Exonic hg19 STAD TCGA-BR-A4QI 2 In-Frame Intra-chr q23.1 q23.1 Seq+ 14959 ChimerSeq FusionScan TCGA_RNA-Seq CAPZB-EIF4G3 CAPZB chr1 19746154 - EIF4G3 chr1 21377487 - Exonic hg19 STAD TCGA-BR-A4QI 2 CDS-5'UTR Intra-chr p36.13 p36.12 Seq+ 14960 ChimerSeq FusionScan TCGA_RNA-Seq XYLT1-QPRT XYLT1 chr16 17352844 - QPRT chr16 29705984 + Exonic hg19 STAD TCGA-BR-A4QI 2 In-Frame Intra-chr p12.3 p11.2 Seq+ 14961 ChimerSeq FusionScan TCGA_RNA-Seq SYNGR2-CCDC40 SYNGR2 chr17 76164796 + CCDC40 chr17 78013610 + Exonic hg19 STAD TCGA-BR-A4QI 2 In-Frame Intra-chr q25.3 q25.3 Seq+ 14962 ChimerSeq FusionScan TCGA_RNA-Seq SHB-LYN SHB chr9 37974618 - LYN chr8 56854413 + Exonic hg19 STAD TCGA-BR-A4QI 2 CDS-5'UTR Inter-chr p13.1 q12.1 TK:Src Seq+ 14963 ChimerSeq FusionScan TCGA_RNA-Seq IARS-TH1L IARS chr9 94991282 - TH1L chr20 57565964 + Exonic hg19 STAD TCGA-BR-A4QI 2 Out-of-Frame Inter-chr q22.31 14964 ChimerSeq FusionScan TCGA_RNA-Seq N4BP2L2-RUNX1 N4BP2L2 chr13 33091993 - RUNX1 chr21 36171759 - Exonic hg19 STAD TCGA-BR-A4QI 2 Out-of-Frame Inter-chr q13.1 q22.12 Oncogene Tumor suppressor gene Transcription factor Seq+ 14965 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB38-KIF20B ZBTB38 chr3 141088788 + KIF20B chr10 91497143 + Exonic hg19 STAD TCGA-BR-A4QI 2 5'UTR-CDS Inter-chr q23 Transcription factor q23.31 Seq+ 14966 ChimerSeq FusionScan TCGA_RNA-Seq MAX-VTI1B MAX chr14 65560425 - VTI1B chr14 68126639 - Exonic hg19 STAD TCGA-D7-A74A 2 In-Frame Intra-chr q23.3 Oncogene Tumor suppressor gene Transcription factor q24.1 14967 ChimerSeq FusionScan TCGA_RNA-Seq PCTP-FBXW10 PCTP chr17 53828605 + FBXW10 chr17 18670026 + Exonic hg19 STAD TCGA-D7-A74A 2 Out-of-Frame Intra-chr q22 p11.2 14968 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-DOCK1 RCC1 chr1 28834672 + DOCK1 chr10 128768965 + Exonic hg19 STAD TCGA-D7-A74A 2 5'UTR-CDS Inter-chr p35.3 q26.2 Seq+ 14969 ChimerSeq FusionScan TCGA_RNA-Seq RPL6-MRPL14 RPL6 chr12 112846043 - MRPL14 chr6 44084366 - Exonic hg19 STAD TCGA-D7-A74A 2 CDS-5'UTR Inter-chr q24.13 p21.1 14970 ChimerSeq FusionScan TCGA_RNA-Seq ZNF775-CAPN8 ZNF775 chr7 150076481 + CAPN8 chr1 223718212 - Exonic hg19 STAD TCGA-D7-A74A 2 5'UTR-CDS Inter-chr q36.1 Transcription factor q41 14971 ChimerSeq FusionScan TCGA_RNA-Seq SLTM-C6orf62 SLTM chr15 59204761 - C6orf62 chr6 24716552 - Exonic hg19 STAD TCGA-D7-A74A 2 In-Frame Inter-chr q22.1 p22.3 14972 ChimerSeq FusionScan TCGA_RNA-Seq NFE2L2-VMP1 NFE2L2 chr2 178129259 - VMP1 chr17 57851114 + Exonic hg19 STAD TCGA-VQ-A8PM 16 In-Frame Inter-chr q31.2 Oncogene Transcription factor q23.1 Seq+ 14973 ChimerSeq FusionScan TCGA_RNA-Seq NFE2L2-VMP1 NFE2L2 chr2 178128130 - VMP1 chr17 57851114 + Exonic hg19 STAD TCGA-VQ-A8PM 10 5'UTR-CDS Inter-chr q31.2 Oncogene Transcription factor q23.1 Seq+ 14974 ChimerSeq FusionScan TCGA_RNA-Seq TRAF3-WDR20 TRAF3 chr14 103338305 + WDR20 chr14 102661274 + Exonic hg19 STAD TCGA-VQ-A8PM 4 In-Frame Intra-chr q32.32 q32.31 Seq+ 14975 ChimerSeq FusionScan TCGA_RNA-Seq SNX9-GTF2H5 SNX9 chr6 158296208 + GTF2H5 chr6 158613008 + Exonic hg19 STAD TCGA-VQ-A8PM 4 Out-of-Frame Intra-chr q25.3 q25.3 Seq+ 14976 ChimerSeq FusionScan TCGA_RNA-Seq NFE2L2-VMP1 NFE2L2 chr2 178129259 - VMP1 chr17 57886156 + Exonic hg19 STAD TCGA-VQ-A8PM 3 In-Frame Inter-chr q31.2 Oncogene Transcription factor q23.1 Seq+ 14977 ChimerSeq FusionScan TCGA_RNA-Seq BRI3-BAIAP2L1 BRI3 chr7 97911765 + BAIAP2L1 chr7 97923423 - Exonic hg19 STAD TCGA-VQ-A8PM 2 Out-of-Frame Intra-chr q21.3 q22.1 14978 ChimerSeq FusionScan TCGA_RNA-Seq DYRK1A-TTC3 DYRK1A chr21 38739930 + TTC3 chr21 38567975 + Exonic hg19 STAD TCGA-VQ-A8PM 2 5'UTR-CDS Intra-chr q22.13 CMGC:DYRK q22.13 Seq+ 14979 ChimerSeq FusionScan TCGA_RNA-Seq ACVR1C-CCDC148 ACVR1C chr2 158443698 - CCDC148 chr2 159201830 - Exonic hg19 STAD TCGA-VQ-A8PM 2 Out-of-Frame Intra-chr q24.1 Tumor suppressor gene q24.1 14980 ChimerSeq FusionScan TCGA_RNA-Seq NEDD9-RANBP3 NEDD9 chr6 11306224 - RANBP3 chr19 5951607 - Exonic hg19 STAD TCGA-VQ-A8PM 2 In-Frame Inter-chr p24.2 p13.3 14981 ChimerSeq FusionScan TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128385902 - RSPO3 chr6 127469792 + Exonic hg19 STAD TCGA-VQ-A92D 23 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 14982 ChimerSeq FusionScan TCGA_RNA-Seq TFEB-SUPT3H TFEB chr6 41657468 - SUPT3H chr6 44797594 - Exonic hg19 STAD TCGA-VQ-A92D 15 In-Frame Intra-chr p21.1 Transcription factor p21.1 Seq+ 14983 ChimerSeq FusionScan TCGA_RNA-Seq CACNB1-KRT222 CACNB1 chr17 37347726 - KRT222 chr17 38812882 - Exonic hg19 STAD TCGA-VQ-A92D 13 Out-of-Frame Intra-chr q12 q21.2 Seq+ 14984 ChimerSeq FusionScan TCGA_RNA-Seq ZRANB1-LHPP ZRANB1 chr10 126631876 + LHPP chr10 126205748 + Exonic hg19 STAD TCGA-VQ-A92D 12 Out-of-Frame Intra-chr q26.13 q26.13 Seq+ 14985 ChimerSeq FusionScan TCGA_RNA-Seq GSDMB-NT5C3L GSDMB chr17 38066008 - NT5C3L chr17 39983878 - Exonic hg19 STAD TCGA-VQ-A92D 11 In-Frame Intra-chr q21.1 14986 ChimerSeq FusionScan TCGA_RNA-Seq FRMD8-MARK2 FRMD8 chr11 65154592 + MARK2 chr11 63662630 + Exonic hg19 STAD TCGA-VQ-A92D 10 Out-of-Frame Intra-chr q13.1 q13.1 CAMK:CAMKL Seq+ 14987 ChimerSeq FusionScan TCGA_RNA-Seq CDH3-SNTB2 CDH3 chr16 68721639 + SNTB2 chr16 69333492 + Exonic hg19 STAD TCGA-VQ-A92D 9 In-Frame Intra-chr q22.1 Seq+ 14988 ChimerSeq FusionScan TCGA_RNA-Seq IL1RAP-TPRG1 IL1RAP chr3 190347287 + TPRG1 chr3 189028174 + Exonic hg19 STAD TCGA-VQ-A92D 9 Out-of-Frame Intra-chr q28 q28 Seq+ 14989 ChimerSeq FusionScan TCGA_RNA-Seq CDK5RAP3-SP2 CDK5RAP3 chr17 46055276 + SP2 chr17 46002284 + Exonic hg19 STAD TCGA-VQ-A92D 9 In-Frame Intra-chr q21.32 q21.32 Transcription factor Seq+ 14990 ChimerSeq FusionScan TCGA_RNA-Seq CLCN3-PALLD CLCN3 chr4 170557239 + PALLD chr4 169589340 + Exonic hg19 STAD TCGA-VQ-A92D 7 Out-of-Frame Intra-chr q33 q32.3 Seq+ 14991 ChimerSeq FusionScan TCGA_RNA-Seq ATG13-C11orf49 ATG13 chr11 46671867 + C11orf49 chr11 47176726 + Exonic hg19 STAD TCGA-VQ-A92D 7 In-Frame Intra-chr p11.2 p11.2 Seq+ 14992 ChimerSeq FusionScan TCGA_RNA-Seq UCK2-PBX1 UCK2 chr1 165875206 + PBX1 chr1 164761730 + Exonic hg19 STAD TCGA-VQ-A92D 7 In-Frame Intra-chr q24.1 q23.3 Oncogene Transcription factor Seq+ 14993 ChimerSeq FusionScan TCGA_RNA-Seq BCAS3-VMP1 BCAS3 chr17 58988063 + VMP1 chr17 57895072 + Exonic hg19 STAD TCGA-VQ-A92D 6 In-Frame Intra-chr q23.2 q23.1 Seq+ 14994 ChimerSeq FusionScan TCGA_RNA-Seq THOC2-ODZ1 THOC2 chrX 122753251 - ODZ1 chrX 123871047 - Exonic hg19 STAD TCGA-VQ-A92D 6 Out-of-Frame Intra-chr q25 14995 ChimerSeq FusionScan TCGA_RNA-Seq ITSN2-DTNB ITSN2 chr2 24526667 - DTNB chr2 25861963 - Exonic hg19 STAD TCGA-VQ-A92D 6 Out-of-Frame Intra-chr p23.3 p23.3 Seq+ 14996 ChimerSeq FusionScan TCGA_RNA-Seq SF3B1-SATB2 SF3B1 chr2 198283232 - SATB2 chr2 200173680 - Exonic hg19 STAD TCGA-VQ-A92D 6 In-Frame Intra-chr q33.1 Oncogene q33.1 Transcription factor Seq+ 14997 ChimerSeq FusionScan TCGA_RNA-Seq SMCR7L-TAB1 SMCR7L chr22 39900539 + TAB1 chr22 39822707 + Exonic hg19 STAD TCGA-VQ-A92D 6 5'UTR-CDS Intra-chr q13.1 14998 ChimerSeq FusionScan TCGA_RNA-Seq LUC7L3-CACNA1H LUC7L3 chr17 48819092 + CACNA1H chr16 1251662 + Exonic hg19 STAD TCGA-VQ-A92D 6 In-Frame Inter-chr q21.33 p13.3 14999 ChimerSeq FusionScan TCGA_RNA-Seq RHOA-AMT RHOA chr3 49405860 - AMT chr3 49455406 - Exonic hg19 STAD TCGA-VQ-A92D 6 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 15000 ChimerSeq FusionScan TCGA_RNA-Seq NIN-RPS29 NIN chr14 51273454 - RPS29 chr14 50052767 - Exonic hg19 STAD TCGA-VQ-A92D 5 Out-of-Frame Intra-chr q22.1 Oncogene q21.3 15001 ChimerSeq FusionScan TCGA_RNA-Seq GTF2I-WBSCR22 GTF2I chr7 74072394 + WBSCR22 chr7 73100965 + Exonic hg19 STAD TCGA-VQ-A92D 5 5'UTR-5'UTR Intra-chr q11.23 Transcription factor Seq+ 15002 ChimerSeq FusionScan TCGA_RNA-Seq TNRC18-CYTH3 TNRC18 chr7 5427302 - CYTH3 chr7 6213364 - Exonic hg19 STAD TCGA-VQ-A92D 5 Out-of-Frame Intra-chr p22.1 p22.1 Seq+ 15003 ChimerSeq FusionScan TCGA_RNA-Seq ST6GAL1-KNG1 ST6GAL1 chr3 186681714 + KNG1 chr3 186456887 + Exonic hg19 STAD TCGA-VQ-A92D 5 5'UTR-CDS Intra-chr q27.3 q27.3 Seq+ 15004 ChimerSeq FusionScan TCGA_RNA-Seq CCNB2-TCF12 CCNB2 chr15 59409567 + TCF12 chr15 57578354 + Exonic hg19 STAD TCGA-VQ-A92D 5 CDS-3'UTR Intra-chr q22.2 q21.3 Oncogene Transcription factor Seq+ 15005 ChimerSeq FusionScan TCGA_RNA-Seq LRBA-SH3D19 LRBA chr4 151719232 - SH3D19 chr4 152147238 - Exonic hg19 STAD TCGA-VQ-A92D 5 CDS-5'UTR Intra-chr q31.3 q31.3 KB Seq+ 15006 ChimerSeq FusionScan TCGA_RNA-Seq AMBRA1-ARHGAP1 AMBRA1 chr11 46563494 - ARHGAP1 chr11 46717706 - Exonic hg19 STAD TCGA-VQ-A92D 5 CDS-5'UTR Intra-chr p11.2 p11.2 Seq+ 15007 ChimerSeq FusionScan TCGA_RNA-Seq VGLL4-IQSEC1 VGLL4 chr3 11744444 - IQSEC1 chr3 12983365 - Exonic hg19 STAD TCGA-VQ-A92D 5 Out-of-Frame Intra-chr p25.2 p25.2 Seq+ 15008 ChimerSeq FusionScan TCGA_RNA-Seq GATAD2A-NCAN GATAD2A chr19 19496947 + NCAN chr19 19359508 + Exonic hg19 STAD TCGA-VQ-A92D 5 5'UTR-CDS Intra-chr p13.11 Transcription factor p13.11 Seq+ 15009 ChimerSeq FusionScan TCGA_RNA-Seq ITSN1-MRAP ITSN1 chr21 35191627 + MRAP chr21 33686861 + Exonic hg19 STAD TCGA-VQ-A92D 5 Out-of-Frame Intra-chr q22.11 q22.11 Seq+ 15010 ChimerSeq FusionScan TCGA_RNA-Seq ZNF638-ANTXR1 ZNF638 chr2 71645769 + ANTXR1 chr2 69472356 + Exonic hg19 STAD TCGA-VQ-A92D 4 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 15011 ChimerSeq FusionScan TCGA_RNA-Seq IQGAP1-ABHD2 IQGAP1 chr15 91017365 + ABHD2 chr15 89719042 + Exonic hg19 STAD TCGA-VQ-A92D 4 In-Frame Intra-chr q26.1 q26.1 Seq+ 15012 ChimerSeq FusionScan TCGA_RNA-Seq DEAF1-PIDD DEAF1 chr11 674535 - PIDD chr11 804463 - Exonic hg19 STAD TCGA-VQ-A92D 4 CDS-5'UTR Intra-chr Transcription factor Seq+ 15013 ChimerSeq FusionScan TCGA_RNA-Seq METTL23-SAP30BP METTL23 chr17 74729459 + SAP30BP chr17 73689519 + Exonic hg19 STAD TCGA-VQ-A92D 4 Out-of-Frame Intra-chr q25.1 q25.1 Seq+ 15014 ChimerSeq FusionScan TCGA_RNA-Seq HIPK2-BRAF HIPK2 chr7 139297947 - BRAF chr7 140449218 - Exonic hg19 STAD TCGA-VQ-A92D 4 In-Frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 TKL:RAF Oncogene 15015 ChimerSeq FusionScan TCGA_RNA-Seq LAMA3-CABLES1 LAMA3 chr18 21508204 + CABLES1 chr18 20793940 + Exonic hg19 STAD TCGA-VQ-A92D 4 Out-of-Frame Intra-chr q11.2 q11.2 Tumor suppressor gene Seq+ 15016 ChimerSeq FusionScan TCGA_RNA-Seq ITGB4-LLGL2 ITGB4 chr17 73723586 + LLGL2 chr17 73552126 + Exonic hg19 STAD TCGA-VQ-A92D 4 In-Frame Intra-chr q25.1 q25.1 Seq+ 15017 ChimerSeq FusionScan TCGA_RNA-Seq DENND1B-ATP6V1G3 DENND1B chr1 197684160 - ATP6V1G3 chr1 198498311 - Exonic hg19 STAD TCGA-VQ-A92D 3 Out-of-Frame Intra-chr q31.3 q31.3 Seq+ 15018 ChimerSeq FusionScan TCGA_RNA-Seq BCAS3-VMP1 BCAS3 chr17 59024713 + VMP1 chr17 57886156 + Exonic hg19 STAD TCGA-VQ-A92D 3 In-Frame Intra-chr q23.2 q23.1 Seq+ 15019 ChimerSeq FusionScan TCGA_RNA-Seq RABGAP1L-DARS2 RABGAP1L chr1 174363283 + DARS2 chr1 173814366 + Exonic hg19 STAD TCGA-VQ-A92D 3 In-Frame Intra-chr q25.1 q25.1 Seq+ 15020 ChimerSeq FusionScan TCGA_RNA-Seq RBPJ-ZCCHC4 RBPJ chr4 26322670 + ZCCHC4 chr4 25363480 + Exonic hg19 STAD TCGA-VQ-A92D 3 Out-of-Frame Intra-chr p15.2 Transcription factor p15.2 Seq+ 15021 ChimerSeq FusionScan TCGA_RNA-Seq CCM2-OGDH CCM2 chr7 45039962 + OGDH chr7 44684925 + Exonic hg19 STAD TCGA-VQ-A92D 3 In-Frame Intra-chr p13 p13 Seq+ 15022 ChimerSeq FusionScan TCGA_RNA-Seq TSPAN14-DYDC2 TSPAN14 chr10 82276079 + DYDC2 chr10 82122190 + Exonic hg19 STAD TCGA-VQ-A92D 3 CDS-5'UTR Intra-chr q23.1 q23.1 Seq+ 15023 ChimerSeq FusionScan TCGA_RNA-Seq GUCY2C-EPS8 GUCY2C chr12 14822655 - EPS8 chr12 15835906 - Exonic hg19 STAD TCGA-VQ-A92D 2 CDS-5'UTR Intra-chr p12.3 Tumor suppressor gene p12.3 15024 ChimerSeq FusionScan TCGA_RNA-Seq TPCN1-ERP29 TPCN1 chr12 113664769 + ERP29 chr12 112459953 + Exonic hg19 STAD TCGA-VQ-A92D 2 In-Frame Intra-chr q24.13 q24.13 15025 ChimerSeq FusionScan TCGA_RNA-Seq TAOK3-VPS37B TAOK3 chr12 118810452 - VPS37B chr12 123355608 - Exonic hg19 STAD TCGA-VQ-A92D 2 5'UTR-CDS Intra-chr q24.23 q24.31 15026 ChimerSeq FusionScan TCGA_RNA-Seq PTPRN2-VIPR2 PTPRN2 chr7 158380249 - VIPR2 chr7 158851269 - Exonic hg19 STAD TCGA-VQ-A92D 2 Out-of-Frame Intra-chr q36.3 q36.3 15027 ChimerSeq FusionScan TCGA_RNA-Seq KIF2A-NDUFAF2 KIF2A chr5 61602363 + NDUFAF2 chr5 60368951 + Exonic hg19 STAD TCGA-VQ-A92D 2 In-Frame Intra-chr q12.1 q12.1 15028 ChimerSeq FusionScan TCGA_RNA-Seq EPAS1-GPR116 EPAS1 chr2 46525076 + GPR116 chr6 46889714 - Exonic hg19 STAD TCGA-VQ-A92D 2 CDS-5'UTR Inter-chr p21 Tumor suppressor gene Transcription factor 15029 ChimerSeq FusionScan TCGA_RNA-Seq PDE4D-ERCC8 PDE4D chr5 58511602 - ERCC8 chr5 60170510 - Exonic hg19 STAD TCGA-VQ-A92D 2 Out-of-Frame Intra-chr q12.1 q12.1 Seq+ 15030 ChimerSeq FusionScan TCGA_RNA-Seq GIT2-TMEM116 GIT2 chr12 110421177 - TMEM116 chr12 112381173 - Exonic hg19 STAD TCGA-VQ-A92D 2 Out-of-Frame Intra-chr q24.11 q24.13 15031 ChimerSeq FusionScan TCGA_RNA-Seq LRBA-FBXW7 LRBA chr4 151729471 - FBXW7 chr4 153271276 - Exonic hg19 STAD TCGA-VQ-A92D 2 Out-of-Frame Intra-chr q31.3 q31.3 Oncogene Tumor suppressor gene Seq+ 15032 ChimerSeq FusionScan TCGA_RNA-Seq BTAF1-HECTD2 BTAF1 chr10 93695537 + HECTD2 chr10 93220183 + Exonic hg19 STAD TCGA-VQ-A92D 2 Out-of-Frame Intra-chr q23.32 q23.32 Seq+ 15033 ChimerSeq FusionScan TCGA_RNA-Seq CHN2-TAX1BP1 CHN2 chr7 29234606 + TAX1BP1 chr7 27824781 + Exonic hg19 STAD TCGA-VQ-A92D 2 Out-of-Frame Intra-chr p14.3 p15.2 Seq+ 15034 ChimerSeq FusionScan TCGA_RNA-Seq FMN1-PATL2 FMN1 chr15 33357157 - PATL2 chr15 44968763 - Exonic hg19 STAD TCGA-VQ-A92D 2 CDS-5'UTR Intra-chr q21.1 Seq+ 15035 ChimerSeq FusionScan TCGA_RNA-Seq GFOD2-C16orf48 GFOD2 chr16 67753065 - C16orf48 chr16 67700168 - Exonic hg19 STAD TCGA-BR-8296 2 5'UTR-CDS Intra-chr q22.1 15036 ChimerSeq FusionScan TCGA_RNA-Seq ADK-AKAP13 ADK chr10 76285184 + AKAP13 chr15 86182604 + Exonic hg19 STAD TCGA-BR-8296 2 In-Frame Inter-chr q22.2 q25.3 Seq+ 15037 ChimerSeq FusionScan TCGA_RNA-Seq ATP2C2-FTO ATP2C2 chr16 84432215 + FTO chr16 53967896 + Exonic hg19 STAD TCGA-CD-8534 3 In-Frame Intra-chr q24.1 q12.2 Seq+ 15038 ChimerSeq FusionScan TCGA_RNA-Seq ZKSCAN1-IQGAP2 ZKSCAN1 chr7 99627998 + IQGAP2 chr5 75757394 + Exonic hg19 STAD TCGA-CD-8534 2 In-Frame Inter-chr q22.1 Transcription factor q13.3 Tumor suppressor gene Seq+ 15039 ChimerSeq FusionScan TCGA_RNA-Seq UPF1-SIPA1L3 UPF1 chr19 18961051 + SIPA1L3 chr19 38597176 + Exonic hg19 STAD TCGA-CD-8534 2 Out-of-Frame Intra-chr p13.11 q13.13 15040 ChimerSeq FusionScan TCGA_RNA-Seq CTNNAL1-TLE1 CTNNAL1 chr9 111775581 - TLE1 chr9 84268951 - Exonic hg19 STAD TCGA-CD-8534 2 In-Frame Intra-chr q31.3 q21.32 15041 ChimerSeq FusionScan TCGA_RNA-Seq PLXNB1-ALDOA PLXNB1 chr3 48471416 - ALDOA chr16 30078554 + Exonic hg19 STAD TCGA-BR-4201 2 5'UTR-5'UTR Inter-chr p21.31 p11.2 Seq+ 15042 ChimerSeq FusionScan TCGA_RNA-Seq COPS6-TMEM219 COPS6 chr7 99688110 + TMEM219 chr16 29984270 + Exonic hg19 STAD TCGA-F1-6874 2 CDS-3'UTR Inter-chr q22.1 p11.2 15043 ChimerSeq FusionScan TCGA_RNA-Seq TNRC6B-ADSL TNRC6B chr22 40552186 + ADSL chr22 40754867 + Exonic hg19 STAD TCGA-VQ-AA69 3 In-Frame Intra-chr q13.1 q13.1 Seq+ 15044 ChimerSeq FusionScan TCGA_RNA-Seq TNRC6B-ADSL TNRC6B chr22 40552186 + ADSL chr22 40749076 + Exonic hg19 STAD TCGA-VQ-AA69 3 Out-of-Frame Intra-chr q13.1 q13.1 Seq+ 15045 ChimerSeq FusionScan TCGA_RNA-Seq ATP5B-UFM1 ATP5B chr12 57038954 - UFM1 chr13 38934847 + Exonic hg19 STAD TCGA-VQ-AA69 2 In-Frame Inter-chr q13.3 q13.3 15046 ChimerSeq FusionScan TCGA_RNA-Seq PKD1-PIEZO1 PKD1 chr16 2155865 - PIEZO1 chr16 88802816 - Exonic hg19 STAD TCGA-VQ-AA69 2 In-Frame Intra-chr p13.3 CAMK:PKD Tumor suppressor gene q24.3 15047 ChimerSeq FusionScan TCGA_RNA-Seq SPG7-PRPF6 SPG7 chr16 89579445 + PRPF6 chr20 62641552 + Exonic hg19 STAD TCGA-VQ-AA69 2 In-Frame Inter-chr q24.3 q13.33 15048 ChimerSeq FusionScan TCGA_RNA-Seq PASK-DYSF PASK chr2 242046767 - DYSF chr2 71908130 + Exonic hg19 STAD TCGA-VQ-AA69 2 Out-of-Frame Intra-chr q37.3 CAMK:CAMKL p13.2 15049 ChimerSeq FusionScan TCGA_RNA-Seq ATXN7-ZNF385D ATXN7 chr3 63965843 + ZNF385D chr3 21478695 - Exonic hg19 STAD TCGA-R5-A7O7 5 Out-of-Frame Intra-chr p14.1 p24.3 Transcription factor Seq+ 15050 ChimerSeq FusionScan TCGA_RNA-Seq UGT1A6-NDUFA10 UGT1A6 chr2 234602511 + NDUFA10 chr2 240946787 - Exonic hg19 STAD TCGA-R5-A7O7 4 Out-of-Frame Intra-chr q37.1 15051 ChimerSeq FusionScan TCGA_RNA-Seq ACBD6-RFWD2 ACBD6 chr1 180382500 - RFWD2 chr1 176118210 - Exonic hg19 STAD TCGA-R5-A7O7 3 In-Frame Intra-chr q25.3 q25.2 Tumor suppressor gene 15052 ChimerSeq FusionScan TCGA_RNA-Seq TTLL4-CXCR2 TTLL4 chr2 219575760 + CXCR2 chr2 218999499 + Exonic hg19 STAD TCGA-R5-A7O7 3 5'UTR-5'UTR Intra-chr q35 q35 Tumor suppressor gene Seq+ 15053 ChimerSeq FusionScan TCGA_RNA-Seq ENC1-HSF2BP ENC1 chr5 73936131 - HSF2BP chr21 44949842 - Exonic hg19 STAD TCGA-R5-A7O7 3 5'UTR-CDS Inter-chr q13.3 q22.3 15054 ChimerSeq FusionScan TCGA_RNA-Seq TNIK-FNDC3B TNIK chr3 171087408 - FNDC3B chr3 172025152 + Exonic hg19 STAD TCGA-R5-A7O7 3 Out-of-Frame Intra-chr q26.31 STE:STE20 q26.31 15055 ChimerSeq FusionScan TCGA_RNA-Seq USP15-SPOPL USP15 chr12 62654284 + SPOPL chr2 139326505 + Exonic hg19 STAD TCGA-R5-A7O7 2 In-Frame Inter-chr q14.1 q22.1 15056 ChimerSeq FusionScan TCGA_RNA-Seq SPATS2L-PLCL1 SPATS2L chr2 201171645 + PLCL1 chr2 198948481 + Exonic hg19 STAD TCGA-R5-A7O7 2 5'UTR-CDS Intra-chr q33.1 q33.1 15057 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF3-CTNND2 ARHGEF3 chr3 57069115 - CTNND2 chr5 11732384 - Exonic hg19 STAD TCGA-R5-A7O7 2 Out-of-Frame Inter-chr p14.3 p15.2 Seq+ 15058 ChimerSeq FusionScan TCGA_RNA-Seq IL8-TBCA IL8 chr4 74606439 + TBCA chr5 77004172 - Exonic hg19 STAD TCGA-R5-A7O7 2 Out-of-Frame Inter-chr q14.1 15059 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP21-MSRB2 ARHGAP21 chr10 25010765 - MSRB2 chr10 23399170 + Exonic hg19 STAD TCGA-R5-A7O7 2 In-Frame Intra-chr p12.1 p12.2 Seq+ 15060 ChimerSeq FusionScan TCGA_RNA-Seq EIF4B-ADAP1 EIF4B chr12 53421972 + ADAP1 chr7 975141 - Exonic hg19 STAD TCGA-D7-A4YT 14 In-Frame Inter-chr q13.13 p22.3 Seq+ 15061 ChimerSeq FusionScan TCGA_RNA-Seq ADAP1-EIF4B ADAP1 chr7 994031 - EIF4B chr12 53427589 + Exonic hg19 STAD TCGA-D7-A4YT 5 In-Frame Inter-chr p22.3 q13.13 Seq+ 15062 ChimerSeq FusionScan TCGA_RNA-Seq KAT2A-SLC38A10 KAT2A chr17 40272242 - SLC38A10 chr17 79220861 - Exonic hg19 STAD TCGA-D7-A4YT 5 Out-of-Frame Intra-chr q21.2 q25.3 Seq+ 15063 ChimerSeq FusionScan TCGA_RNA-Seq HDAC1-ZBTB8B HDAC1 chr1 32757819 + ZBTB8B chr1 32946491 + Exonic hg19 STAD TCGA-D7-A4YT 4 In-Frame Intra-chr p35.2 Tumor suppressor gene p35.1 Transcription factor Seq+ 15064 ChimerSeq FusionScan TCGA_RNA-Seq NCOA2-LYN NCOA2 chr8 71126137 - LYN chr8 56879273 + Exonic hg19 STAD TCGA-D7-A4YT 2 In-Frame Intra-chr q13.3 Oncogene Transcription factor q12.1 TK:Src 15065 ChimerSeq FusionScan TCGA_RNA-Seq MATL2963-NUMA1 MATL2963 chr12 7263168 + NUMA1 chr11 71718481 - Exonic hg19 STAD TCGA-D7-A4YT 2 5'UTR-CDS Inter-chr q13.4 Oncogene 15066 ChimerSeq FusionScan TCGA_RNA-Seq CSGALNACT2-RAB27B CSGALNACT2 chr10 43634015 + RAB27B chr18 52544797 + Exonic hg19 STAD TCGA-D7-A4YT 2 5'UTR-5'UTR Inter-chr q11.21 q21.2 15067 ChimerSeq FusionScan TCGA_RNA-Seq STRN-TPTE2 STRN chr2 37152247 - TPTE2 chr13 20077417 - Exonic hg19 STAD TCGA-D7-A4YT 2 CDS-5'UTR Inter-chr p22.2 q12.11 Tumor suppressor gene 15068 ChimerSeq FusionScan TCGA_RNA-Seq MMS22L-REV1 MMS22L chr6 97599646 - REV1 chr2 100065966 - Exonic hg19 STAD TCGA-RD-A7BS 2 Out-of-Frame Inter-chr q16.1 q11.2 15069 ChimerSeq FusionScan TCGA_RNA-Seq ERP44-C9orf3 ERP44 chr9 102861065 - C9orf3 chr9 97848963 + Exonic hg19 STAD TCGA-RD-A7BS 2 CDS-3'UTR Intra-chr q31.1 q22.32 15070 ChimerSeq FusionScan TCGA_RNA-Seq KDM4C-S100A9 KDM4C chr9 7049200 + S100A9 chr1 153330744 + Exonic hg19 STAD TCGA-RD-A7BS 2 CDS-5'UTR Inter-chr p24.1 q21.3 15071 ChimerSeq FusionScan TCGA_RNA-Seq STK3-GPR126 STK3 chr8 99718694 - GPR126 chr6 142688705 + Exonic hg19 STAD TCGA-RD-A7BS 2 Out-of-Frame Inter-chr q22.2 15072 ChimerSeq FusionScan TCGA_RNA-Seq R3HDM2-WDFY4 R3HDM2 chr12 57691872 - WDFY4 chr10 50189411 + Exonic hg19 STAD TCGA-RD-A7BS 2 Out-of-Frame Inter-chr q13.3 q11.23 15073 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-KRT27 GRB7 chr17 37900916 + KRT27 chr17 38933984 - Exonic hg19 STAD TCGA-D7-8573 47 In-Frame Intra-chr q12 q21.2 Seq+ 15074 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-KRT25 GRB7 chr17 37900916 + KRT25 chr17 38906849 - Exonic hg19 STAD TCGA-D7-8573 37 In-Frame Intra-chr q12 q21.2 15075 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-WIPF2 ERBB2 chr17 37873733 + WIPF2 chr17 38412642 + Exonic hg19 STAD TCGA-D7-8573 8 CDS-5'UTR Intra-chr q12 Oncogene q21.2 Seq+ 15076 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-IKZF3 GRB7 chr17 37894386 + IKZF3 chr17 37949186 - Exonic hg19 STAD TCGA-D7-8573 7 5'UTR-CDS Intra-chr q12 q21.1 Tumor suppressor gene Transcription factor Seq+ 15077 ChimerSeq FusionScan TCGA_RNA-Seq PGAP3-KRT222 PGAP3 chr17 37840849 - KRT222 chr17 38818296 - Exonic hg19 STAD TCGA-D7-8573 5 In-Frame Intra-chr q12 Oncogene q21.2 Seq+ 15078 ChimerSeq FusionScan TCGA_RNA-Seq MSL1-KRT24 MSL1 chr17 38279633 + KRT24 chr17 38858185 - Exonic hg19 STAD TCGA-D7-8573 5 5'UTR-CDS Intra-chr q21.1 q21.2 Seq+ 15079 ChimerSeq FusionScan TCGA_RNA-Seq MSL1-BEND3 MSL1 chr17 38282659 + BEND3 chr6 107420500 - Exonic hg19 STAD TCGA-D7-8573 4 CDS-5'UTR Inter-chr q21.1 q21 15080 ChimerSeq FusionScan TCGA_RNA-Seq THRA-MED24 THRA chr17 38243106 + MED24 chr17 38209910 - Exonic hg19 STAD TCGA-D7-8573 4 CDS-5'UTR Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Seq+ 15081 ChimerSeq FusionScan TCGA_RNA-Seq WIPF2-THRA WIPF2 chr17 38375744 + THRA chr17 38230444 + Exonic hg19 STAD TCGA-D7-8573 3 5'UTR-5'UTR Intra-chr q21.2 q21.1 Tumor suppressor gene Transcription factor Seq+ 15082 ChimerSeq FusionScan TCGA_RNA-Seq THRA-MED24 THRA chr17 38243106 + MED24 chr17 38209888 - Exonic hg19 STAD TCGA-D7-8573 3 CDS-5'UTR Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Seq+ 15083 ChimerSeq FusionScan TCGA_RNA-Seq MAP3K5-ATG5 MAP3K5 chr6 137112847 - ATG5 chr6 106727698 - Exonic hg19 STAD TCGA-D7-8573 3 Out-of-Frame Intra-chr q23.3 STE:STE11 q21 15084 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-QTRT1 RCC1 chr1 28834672 + QTRT1 chr19 10812625 + Exonic hg19 STAD TCGA-D7-8573 2 5'UTR-CDS Inter-chr p35.3 p13.2 15085 ChimerSeq FusionScan TCGA_RNA-Seq SETD5-SPATS2 SETD5 chr3 9439661 + SPATS2 chr12 49908337 + Exonic hg19 STAD TCGA-D7-8573 2 5'UTR-CDS Inter-chr p25.3 q13.12 15086 ChimerSeq FusionScan TCGA_RNA-Seq GPR35-CCDC84 GPR35 chr2 241558448 + CCDC84 chr11 118885703 + Exonic hg19 STAD TCGA-D7-8573 2 Out-of-Frame Inter-chr q37.3 15087 ChimerSeq FusionScan TCGA_RNA-Seq RPS3-TBL1XR1 RPS3 chr11 75110621 + TBL1XR1 chr3 176816329 - Exonic hg19 STAD TCGA-D7-8573 2 CDS-5'UTR Inter-chr q13.4 q26.32 15088 ChimerSeq FusionScan TCGA_RNA-Seq MAML2-MIR1260B MAML2 chr11 96074546 - MIR1260B chr11 96074601 + Exonic hg19 STAD TCGA-D7-8573 2 CDS-5'UTR Intra-chr q21 Oncogene q21 15089 ChimerSeq FusionScan TCGA_RNA-Seq EPHA2-LINC00493 EPHA2 chr1 16464347 - LINC00493 chr20 18549879 + Exonic hg19 STAD TCGA-D7-8573 2 CDS-5'UTR Inter-chr p36.13 Tumor suppressor gene 15090 ChimerSeq FusionScan TCGA_RNA-Seq INPP5A-ZNF511 INPP5A chr10 134563349 + ZNF511 chr10 135126291 + Exonic hg19 STAD TCGA-D7-8573 2 Out-of-Frame Intra-chr q26.3 q26.3 Transcription factor 15091 ChimerSeq FusionScan TCGA_RNA-Seq PDZD2-MSH6 PDZD2 chr5 32077712 + MSH6 chr2 48030558 + Exonic hg19 STAD TCGA-D7-8573 2 In-Frame Inter-chr p13.3 p16.3 Oncogene 15092 ChimerSeq FusionScan TCGA_RNA-Seq RARA-PPP1R1B RARA chr17 38474700 + PPP1R1B chr17 37785422 + Exonic hg19 STAD TCGA-D7-8573 2 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor q12 Tumor suppressor gene Seq+ 15093 ChimerSeq FusionScan TCGA_RNA-Seq SLC7A5P1-SMG1 SLC7A5P1 chr16 29624423 - SMG1 chr16 18908278 - Exonic hg19 STAD TCGA-D7-8573 2 3'UTR-CDS Intra-chr p11.2 p12.3 Atypical:PIKK 15094 ChimerSeq FusionScan TCGA_RNA-Seq TRIP11-DNAJB6 TRIP11 chr14 92505890 - DNAJB6 chr7 157202488 + Exonic hg19 STAD TCGA-D7-8573 2 In-Frame Inter-chr q32.12 Oncogene q36.3 15095 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-WIPF2 GRB7 chr17 37894386 + WIPF2 chr17 38430041 + Exonic hg19 STAD TCGA-BR-8483 73 5'UTR-CDS Intra-chr q12 q21.2 Seq+ 15096 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-WIPF2 GRB7 chr17 37894645 + WIPF2 chr17 38430041 + Exonic hg19 STAD TCGA-BR-8483 53 5'UTR-CDS Intra-chr q12 q21.2 Seq+ 15097 ChimerSeq FusionScan TCGA_RNA-Seq ACACA-RARA ACACA chr17 35687112 - RARA chr17 38487108 + Exonic hg19 STAD TCGA-BR-8483 43 CDS-5'UTR Intra-chr q21.2 Oncogene Transcription factor Seq+ 15098 ChimerSeq FusionScan TCGA_RNA-Seq PGAP3-TOP2A PGAP3 chr17 37844086 - TOP2A chr17 38556915 - Exonic hg19 STAD TCGA-BR-8483 13 Out-of-Frame Intra-chr q12 Oncogene q21.2 Seq+ 15099 ChimerSeq FusionScan TCGA_RNA-Seq TADA2A-NT5C3L TADA2A chr17 35830636 + NT5C3L chr17 39988729 - Exonic hg19 STAD TCGA-BR-8483 4 Out-of-Frame Intra-chr q12 Seq+ 15100 ChimerSeq FusionScan TCGA_RNA-Seq ACACA-RARA ACACA chr17 35696763 - RARA chr17 38487108 + Exonic hg19 STAD TCGA-BR-8483 3 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor Seq+ 15101 ChimerSeq FusionScan TCGA_RNA-Seq STEAP3-SWT1 STEAP3 chr2 119981464 + SWT1 chr1 185129964 + Exonic hg19 STAD TCGA-BR-8483 2 5'UTR-5'UTR Inter-chr q14.2 q25.3 15102 ChimerSeq FusionScan TCGA_RNA-Seq DHCR24-DNAJC11 DHCR24 chr1 55349290 - DNAJC11 chr1 6714099 - Exonic hg19 STAD TCGA-BR-8483 2 In-Frame Intra-chr p32.3 p36.31 Tumor suppressor gene 15103 ChimerSeq FusionScan TCGA_RNA-Seq TADA2A-KRT23 TADA2A chr17 35767040 + KRT23 chr17 39086348 - Exonic hg19 STAD TCGA-BR-8483 2 5'UTR-CDS Intra-chr q12 15104 ChimerSeq FusionScan TCGA_RNA-Seq GRB7-WIPF2 GRB7 chr17 37894386 + WIPF2 chr17 38433334 + Exonic hg19 STAD TCGA-BR-8483 2 5'UTR-CDS Intra-chr q12 q21.2 Seq+ 15105 ChimerSeq FusionScan TCGA_RNA-Seq CSDE1-ST7L CSDE1 chr1 115279378 - ST7L chr1 113121039 - Exonic hg19 STAD TCGA-BR-8483 2 Out-of-Frame Intra-chr p13.2 p13.2 Seq+ 15106 ChimerSeq FusionScan TCGA_RNA-Seq CHD6-RNASE4 CHD6 chr20 40246978 - RNASE4 chr14 21167513 + Exonic hg19 STAD TCGA-VQ-A94P 2 5'UTR-5'UTR Inter-chr q12 q11.2 15107 ChimerSeq FusionScan TCGA_RNA-Seq FAM84B-PVT1 FAM84B chr8 127570278 - PVT1 chr8 129001407 + Exonic hg19 STAD TCGA-VQ-A94P 2 5'UTR-5'UTR Intra-chr q24.21 q24.21 15108 ChimerSeq FusionScan TCGA_RNA-Seq MDM4-DNAJB6 MDM4 chr1 204501374 + DNAJB6 chr7 157202488 + Exonic hg19 STAD TCGA-VQ-A94P 2 In-Frame Inter-chr q32.1 Oncogene q36.3 15109 ChimerSeq FusionScan TCGA_RNA-Seq RPS6-DENND4C RPS6 chr9 19378365 - DENND4C chr9 19369834 + Exonic hg19 STAD TCGA-VQ-A94P 2 3'UTR-CDS Intra-chr p22.1 p22.1 15110 ChimerSeq FusionScan TCGA_RNA-Seq NUP50-C10orf11 NUP50 chr22 45567564 + C10orf11 chr10 77795765 + Exonic hg19 STAD TCGA-BR-A4IY 3 Out-of-Frame Inter-chr q13.31 Seq+ 15111 ChimerSeq FusionScan TCGA_RNA-Seq DDX27-PTPRF DDX27 chr20 47841528 + PTPRF chr1 44086124 + Exonic hg19 STAD TCGA-BR-A4IY 2 In-Frame Inter-chr q13.13 p34.2 15112 ChimerSeq FusionScan TCGA_RNA-Seq BICD2-IPPK BICD2 chr9 95477534 - IPPK chr9 95420963 - Exonic hg19 STAD TCGA-BR-A4IY 2 In-Frame Intra-chr q22.31 q22.31 15113 ChimerSeq FusionScan TCGA_RNA-Seq SUGT1-N4BP2L2 SUGT1 chr13 53233384 + N4BP2L2 chr13 33101669 - Exonic hg19 STAD TCGA-BR-A4IY 2 In-Frame Intra-chr q14.3 q13.1 15114 ChimerSeq FusionScan TCGA_RNA-Seq GATA6-DPF1 GATA6 chr18 19752240 + DPF1 chr19 38713348 - Exonic hg19 STAD TCGA-HU-8243 3 Out-of-Frame Inter-chr q11.2 Transcription factor q13.2 Transcription factor Seq+ 15115 ChimerSeq FusionScan TCGA_RNA-Seq ZNF7-GUK1 ZNF7 chr8 146062892 + GUK1 chr1 228333211 + Exonic hg19 STAD TCGA-HU-8243 2 In-Frame Inter-chr q24.3 Transcription factor q42.13 15116 ChimerSeq FusionScan TCGA_RNA-Seq CYTH1-IL16 CYTH1 chr17 76778283 - IL16 chr15 81598248 + Exonic hg19 STAD TCGA-HU-8243 2 Out-of-Frame Inter-chr q25.3 q25.1 15117 ChimerSeq FusionScan TCGA_RNA-Seq STIP1-COX8A STIP1 chr11 63960759 + COX8A chr11 63743696 + Exonic hg19 STAD TCGA-HU-8243 2 In-Frame Intra-chr q13.1 q13.1 15118 ChimerSeq FusionScan TCGA_RNA-Seq TNKS2-RP9 TNKS2 chr10 93602148 + RP9 chr7 33136974 - Exonic hg19 STAD TCGA-HU-8243 2 In-Frame Inter-chr q23.32 p14.3 15119 ChimerSeq FusionScan TCGA_RNA-Seq SYNE2-CHMP4A SYNE2 chr14 64681188 + CHMP4A chr14 24681035 - Exonic hg19 STAD TCGA-HU-8243 2 In-Frame Intra-chr q23.2 q12 15120 ChimerSeq FusionScan TCGA_RNA-Seq FAM156A-SEPT9 FAM156A chrX 52987601 - SEPT9 chr17 75303222 + Exonic hg19 STAD TCGA-HU-8243 2 5'UTR-5'UTR Inter-chr p11.22 15121 ChimerSeq FusionScan TCGA_RNA-Seq HSD17B4-NDFIP1 HSD17B4 chr5 118792063 + NDFIP1 chr5 141531295 + Exonic hg19 STAD TCGA-HU-8243 2 CDS-3'UTR Intra-chr q23.1 q31.3 15122 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-GABPB2 RCC1 chr1 28834672 + GABPB2 chr1 151060665 + Exonic hg19 STAD TCGA-HU-8243 2 5'UTR-5'UTR Intra-chr p35.3 q21.3 15123 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-C11orf93 RCC1 chr1 28834672 + C11orf93 chr11 111171251 + Exonic hg19 STAD TCGA-HU-8243 2 5'UTR-5'UTR Inter-chr p35.3 15124 ChimerSeq FusionScan TCGA_RNA-Seq C7orf44-MAPKAP1 C7orf44 chr7 43769027 - MAPKAP1 chr9 128420078 - Exonic hg19 STAD TCGA-HU-8243 2 5'UTR-5'UTR Inter-chr q33.3 15125 ChimerSeq FusionScan TCGA_RNA-Seq DNM2-SMARCA4 DNM2 chr19 10829079 + SMARCA4 chr19 11129632 + Exonic hg19 STAD TCGA-VQ-A928 15 In-Frame Intra-chr p13.2 p13.2 Oncogene Tumor suppressor gene Seq+ 15126 ChimerSeq FusionScan TCGA_RNA-Seq CNOT3-RPS9 CNOT3 chr19 54641709 + RPS9 chr19 54705027 + Exonic hg19 STAD TCGA-VQ-A928 9 5'UTR-3'UTR Intra-chr Tumor suppressor gene 15127 ChimerSeq FusionScan TCGA_RNA-Seq WDR45L-RAB40C WDR45L chr17 80601824 - RAB40C chr16 667207 + Exonic hg19 STAD TCGA-VQ-A928 9 In-Frame Inter-chr p13.3 15128 ChimerSeq FusionScan TCGA_RNA-Seq RCOR1-AMN RCOR1 chr14 103059662 + AMN chr14 103390047 + Exonic hg19 STAD TCGA-VQ-A928 8 In-Frame Intra-chr q32.31 q32.32 Seq+ 15129 ChimerSeq FusionScan TCGA_RNA-Seq HIP1R-C12orf65 HIP1R chr12 123344377 + C12orf65 chr12 123738193 + Exonic hg19 STAD TCGA-VQ-A928 5 CDS-5'UTR Intra-chr q24.31 q24.31 Seq+ 15130 ChimerSeq FusionScan TCGA_RNA-Seq BORA-PIBF1 BORA chr13 73312181 + PIBF1 chr13 73539411 + Exonic hg19 STAD TCGA-VQ-A928 4 Out-of-Frame Intra-chr q21.33 q21.33 Seq+ 15131 ChimerSeq FusionScan TCGA_RNA-Seq ITGB4-UNK ITGB4 chr17 73720862 + UNK chr17 73805840 + Exonic hg19 STAD TCGA-VQ-A928 4 Out-of-Frame Intra-chr q25.1 q25.1 15132 ChimerSeq FusionScan TCGA_RNA-Seq PBRM1-WDR82 PBRM1 chr3 52712515 - WDR82 chr3 52304825 - Exonic hg19 STAD TCGA-VQ-A928 4 In-Frame Intra-chr p21.1 Oncogene Tumor suppressor gene p21.2 Seq+ 15133 ChimerSeq FusionScan TCGA_RNA-Seq INTS4-NARS2 INTS4 chr11 77690041 - NARS2 chr11 78154804 - Exonic hg19 STAD TCGA-VQ-A928 4 In-Frame Intra-chr q14.1 q14.1 Seq+ 15134 ChimerSeq FusionScan TCGA_RNA-Seq EP300-ZC3H7B EP300 chr22 41569788 + ZC3H7B chr22 41716658 + Exonic hg19 STAD TCGA-VQ-A928 3 CDS-5'UTR Intra-chr q13.2 Oncogene q13.2 Seq+ 15135 ChimerSeq FusionScan TCGA_RNA-Seq TMEM204-HN1L TMEM204 chr16 1578797 + HN1L chr16 1735439 + Exonic hg19 STAD TCGA-VQ-A928 3 5'UTR-CDS Intra-chr p13.3 Seq+ 15136 ChimerSeq FusionScan TCGA_RNA-Seq SPTLC1-TCERG1L SPTLC1 chr9 94842297 - TCERG1L chr10 132902617 - Exonic hg19 STAD TCGA-VQ-A928 3 Out-of-Frame Inter-chr q22.31 q26.3 15137 ChimerSeq FusionScan TCGA_RNA-Seq PMPCB-WWOX PMPCB chr7 102939155 + WWOX chr16 79245504 + Exonic hg19 STAD TCGA-VQ-A928 3 In-Frame Inter-chr q22.1 q23.1 Tumor suppressor gene Seq+ 15138 ChimerSeq FusionScan TCGA_RNA-Seq FAM45A-GRK5 FAM45A chr10 120892121 + GRK5 chr10 121207634 + Exonic hg19 STAD TCGA-VQ-A928 2 In-Frame Intra-chr q26.11 q26.11 15139 ChimerSeq FusionScan TCGA_RNA-Seq ERP29-ACAD10 ERP29 chr12 112451413 + ACAD10 chr12 112174634 + Exonic hg19 STAD TCGA-VQ-A928 2 Out-of-Frame Intra-chr q24.13 q24.12 15140 ChimerSeq FusionScan TCGA_RNA-Seq KAT6B-VDAC2 KAT6B chr10 76586543 + VDAC2 chr10 76989401 + Exonic hg19 STAD TCGA-VQ-A928 2 5'UTR-5'UTR Intra-chr Oncogene q22.2 15141 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP35-CCDC9 ARHGAP35 chr19 47492932 + CCDC9 chr19 47763577 + Exonic hg19 STAD TCGA-VQ-A928 2 Out-of-Frame Intra-chr q13.32 Transcription factor q13.32 15142 ChimerSeq FusionScan TCGA_RNA-Seq INVS-ARHGAP15 INVS chr9 102888831 + ARHGAP15 chr2 144460987 + Exonic hg19 STAD TCGA-VQ-A928 2 Out-of-Frame Inter-chr q31.1 q22.2 15143 ChimerSeq FusionScan TCGA_RNA-Seq CUL4A-MCF2L CUL4A chr13 113864089 + MCF2L chr13 113750684 + Exonic hg19 STAD TCGA-VQ-A928 2 Out-of-Frame Intra-chr q34 q34 Seq+ 15144 ChimerSeq FusionScan TCGA_RNA-Seq MAPKAPK5-ERP29 MAPKAPK5 chr12 112304035 + ERP29 chr12 112457559 + Exonic hg19 STAD TCGA-VQ-A928 2 In-Frame Intra-chr q24.12 CAMK:MAPKAPK q24.13 15145 ChimerSeq FusionScan TCGA_RNA-Seq SLC9A3-ZDHHC11 SLC9A3 chr5 488430 - ZDHHC11 chr5 801279 - Exonic hg19 STAD TCGA-BR-8362 4 Out-of-Frame Intra-chr p15.33 p15.33 Seq+ 15146 ChimerSeq FusionScan TCGA_RNA-Seq DTL-INTS7 DTL chr1 212220759 + INTS7 chr1 212194554 - Exonic hg19 STAD TCGA-BR-8362 4 In-Frame Intra-chr q32.3 q32.3 Seq+ 15147 ChimerSeq FusionScan TCGA_RNA-Seq SNHG8-FAM53B SNHG8 chr4 119200292 + FAM53B chr10 126395456 - Exonic hg19 STAD TCGA-BR-8362 2 5'UTR-5'UTR Inter-chr q26 q26.13 15148 ChimerSeq FusionScan TCGA_RNA-Seq STARD10-CPT1A STARD10 chr11 72492019 - CPT1A chr11 68562379 - Exonic hg19 STAD TCGA-BR-8362 2 In-Frame Intra-chr q13.4 q13.3 15149 ChimerSeq FusionScan TCGA_RNA-Seq CARD17-CASP1 CARD17 chr11 104972134 - CASP1 chr11 104905201 - Exonic hg19 STAD TCGA-BR-8362 2 In-Frame Intra-chr q22.3 q22.3 15150 ChimerSeq FusionScan TCGA_RNA-Seq BICD2-IPPK BICD2 chr9 95477534 - IPPK chr9 95420963 - Exonic hg19 STAD TCGA-BR-8362 2 In-Frame Intra-chr q22.31 q22.31 15151 ChimerSeq FusionScan TCGA_RNA-Seq CTTNBP2NL-CHMP1A CTTNBP2NL chr1 112958886 + CHMP1A chr16 89713739 - Exonic hg19 STAD TCGA-BR-8362 2 In-Frame Inter-chr p13.2 q24.3 15152 ChimerSeq FusionScan TCGA_RNA-Seq FCHSD2-C11orf30 FCHSD2 chr11 72851075 - C11orf30 chr11 76162901 + Exonic hg19 STAD TCGA-BR-8362 2 Out-of-Frame Intra-chr q13.4 15153 ChimerSeq FusionScan TCGA_RNA-Seq SNHG8-SERINC2 SNHG8 chr4 119200292 + SERINC2 chr1 31905813 + Exonic hg19 STAD TCGA-VQ-A91D 2 5'UTR-CDS Inter-chr q26 p35.2 15154 ChimerSeq FusionScan TCGA_RNA-Seq MTF2-ATXN7 MTF2 chr1 93545088 + ATXN7 chr3 63965590 + Exonic hg19 STAD TCGA-CG-5722 2 Out-of-Frame Inter-chr p22.1 Transcription factor p14.1 15155 ChimerSeq FusionScan TCGA_RNA-Seq NCOR2-CTDP1 NCOR2 chr12 124882664 - CTDP1 chr18 77455224 + Exonic hg19 STAD TCGA-CG-5722 2 Out-of-Frame Inter-chr q24.31 15156 ChimerSeq FusionScan TCGA_RNA-Seq NOMO1-MPHOSPH8 NOMO1 chr16 14940540 + MPHOSPH8 chr13 20245345 + Exonic hg19 STAD TCGA-CG-5722 2 Out-of-Frame Inter-chr q12.11 15157 ChimerSeq FusionScan TCGA_RNA-Seq TIMM17B-PLP2 TIMM17B chrX 48754041 - PLP2 chrX 49030681 + Exonic hg19 STAD TCGA-CG-5722 2 In-Frame Intra-chr p11.23 p11.23 15158 ChimerSeq FusionScan TCGA_RNA-Seq LPIN3-AGAP1 LPIN3 chr20 39969642 + AGAP1 chr2 236877105 + Exonic hg19 STAD TCGA-CG-5722 2 5'UTR-CDS Inter-chr q12 q37.2 15159 ChimerSeq FusionScan TCGA_RNA-Seq CD22-PARVG CD22 chr19 35820133 + PARVG chr22 44583655 + Exonic hg19 STAD TCGA-CG-5722 2 5'UTR-CDS Inter-chr q13.12 q13.31 15160 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPA1-GAS5 HNRNPA1 chr12 54674606 + GAS5 chr1 173836181 - Exonic hg19 STAD TCGA-CG-5722 2 CDS-3'UTR Inter-chr q13.13 q25.1 Tumor suppressor gene 15161 ChimerSeq FusionScan TCGA_RNA-Seq C19orf48-DOCK1 C19orf48 chr19 51305473 - DOCK1 chr10 129152932 + Exonic hg19 STAD TCGA-HU-A4H6 4 5'UTR-CDS Inter-chr q13.33 q26.2 15162 ChimerSeq FusionScan TCGA_RNA-Seq MTG1-ZNF350 MTG1 chr10 135216277 + ZNF350 chr19 52477784 - Exonic hg19 STAD TCGA-HU-A4H6 4 CDS-5'UTR Inter-chr q26.3 q13.41 Transcription factor 15163 ChimerSeq FusionScan TCGA_RNA-Seq CELF1-CAPN5 CELF1 chr11 47574543 - CAPN5 chr11 76795897 + Exonic hg19 STAD TCGA-HU-A4H6 3 5'UTR-5'UTR Intra-chr p11.2 q13.5 15164 ChimerSeq FusionScan TCGA_RNA-Seq C19orf60-USP32 C19orf60 chr19 18701743 + USP32 chr17 58329803 - Exonic hg19 STAD TCGA-HU-A4H6 3 Out-of-Frame Inter-chr p13.11 q23.2 15165 ChimerSeq FusionScan TCGA_RNA-Seq FEM1B-SEC23B FEM1B chr15 68571003 + SEC23B chr20 18523662 + Exonic hg19 STAD TCGA-HU-A4H6 2 In-Frame Inter-chr q23 p11.23 15166 ChimerSeq FusionScan TCGA_RNA-Seq AGFG1-ACVR2A AGFG1 chr2 228337304 + ACVR2A chr2 148653869 + Exonic hg19 STAD TCGA-HU-A4H6 2 Out-of-Frame Intra-chr q36.3 q22.3 Oncogene 15167 ChimerSeq FusionScan TCGA_RNA-Seq LPIN2-MYL12B LPIN2 chr18 3011715 - MYL12B chr18 3272881 + Exonic hg19 STAD TCGA-HU-A4H6 2 5'UTR-5'UTR Intra-chr p11.31 p11.31 15168 ChimerSeq FusionScan TCGA_RNA-Seq COL4A2-CLIC1 COL4A2 chr13 111158953 + CLIC1 chr6 31702040 - Exonic hg19 STAD TCGA-HU-A4H6 2 CDS-5'UTR Inter-chr q34 15169 ChimerSeq FusionScan TCGA_RNA-Seq EML2-VASP EML2 chr19 46142102 - VASP chr19 46027354 + Exonic hg19 STAD TCGA-HU-A4H6 2 In-Frame Intra-chr q13.32 q13.32 15170 ChimerSeq FusionScan TCGA_RNA-Seq GSK3B-CDC5L GSK3B chr3 119812193 - CDC5L chr6 44413391 + Exonic hg19 STAD TCGA-HU-A4H6 2 CDS-5'UTR Inter-chr q13.33 CMGC:GSK Tumor suppressor gene p21.1 Transcription factor 15171 ChimerSeq FusionScan TCGA_RNA-Seq NT5DC2-LMBRD1 NT5DC2 chr3 52561309 - LMBRD1 chr6 70409084 - Exonic hg19 STAD TCGA-HU-A4H6 2 In-Frame Inter-chr p21.1 q13 15172 ChimerSeq FusionScan TCGA_RNA-Seq CASC4-UPF2 CASC4 chr15 44615217 + UPF2 chr10 12021164 - Exonic hg19 STAD TCGA-HU-A4H6 2 Out-of-Frame Inter-chr q15.3 p14 15173 ChimerSeq FusionScan TCGA_RNA-Seq ACACA-AATF ACACA chr17 35627641 - AATF chr17 35376303 + Exonic hg19 STAD TCGA-D7-A4Z0 2 In-Frame Intra-chr 15174 ChimerSeq FusionScan TCGA_RNA-Seq ERG-APP ERG chr21 39870286 - APP chr21 27484463 - Exonic hg19 STAD TCGA-D7-A4Z0 2 In-Frame Intra-chr q22.2 Oncogene Transcription factor q21.3 Seq+ 15175 ChimerSeq FusionScan TCGA_RNA-Seq MYO1D-AP2B1 MYO1D chr17 31039005 - AP2B1 chr17 33935160 + Exonic hg19 STAD TCGA-D7-A4Z0 2 In-Frame Intra-chr q11.2 q12 15176 ChimerSeq FusionScan TCGA_RNA-Seq SHOC2-DUSP5 SHOC2 chr10 112679415 + DUSP5 chr10 112262478 + Exonic hg19 STAD TCGA-D7-A4Z0 2 5'UTR-CDS Intra-chr q25.2 q25.2 Tumor suppressor gene Seq+ 15177 ChimerSeq FusionScan TCGA_RNA-Seq TIMM17B-PQBP1 TIMM17B chrX 48755349 - PQBP1 chrX 48755212 + Exonic hg19 STAD TCGA-D7-A4Z0 2 5'UTR-5'UTR Intra-chr p11.23 p11.23 Seq+ 15178 ChimerSeq FusionScan TCGA_RNA-Seq RFWD2-AKT3 RFWD2 chr1 175956078 - AKT3 chr1 243727150 - Exonic hg19 STAD TCGA-D7-A4Z0 2 In-Frame Intra-chr q25.2 Tumor suppressor gene AGC:Akt Oncogene 15179 ChimerSeq FusionScan TCGA_RNA-Seq FAM120B-CCDC50 FAM120B chr6 170639638 + CCDC50 chr3 191097947 + Exonic hg19 STAD TCGA-D7-A4Z0 2 In-Frame Inter-chr q28 15180 ChimerSeq FusionScan TCGA_RNA-Seq ATR-U2SURP ATR chr3 142284962 - U2SURP chr3 142751625 + Exonic hg19 STAD TCGA-D7-A4Z0 2 3'UTR-CDS Intra-chr q23 Atypical:PIKK Oncogene Tumor suppressor gene q23 Seq+ 15181 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP1-MYL6 ARHGAP1 chr11 46700914 - MYL6 chr12 56553370 + Exonic hg19 STAD TCGA-D7-A4Z0 2 Out-of-Frame Inter-chr p11.2 q13.2 Seq+ 15182 ChimerSeq FusionScan TCGA_RNA-Seq CD44-SLC1A2 CD44 chr11 35243279 + SLC1A2 chr11 35339063 - Exonic hg19 STAD TCGA-B7-5818 12 In-Frame Intra-chr p13 Oncogene Tumor suppressor gene p13 KB Pub Seq+ 15183 ChimerSeq FusionScan TCGA_RNA-Seq STRADA-FLVCR1 STRADA chr17 61819100 - FLVCR1 chr1 213037066 + Exonic hg19 STAD TCGA-B7-5818 2 5'UTR-CDS Inter-chr q23.3 Tumor suppressor gene q32.3 Seq+ 15184 ChimerSeq FusionScan TCGA_RNA-Seq WDR6-NOC4L WDR6 chr3 49044964 + NOC4L chr12 132635525 + Exonic hg19 STAD TCGA-B7-5818 2 In-Frame Inter-chr p21.31 q24.33 15185 ChimerSeq FusionScan TCGA_RNA-Seq VPS33B-MRPL2 VPS33B chr15 91542906 - MRPL2 chr6 43022224 - Exonic hg19 STAD TCGA-B7-5818 2 Out-of-Frame Inter-chr q26.1 p21.1 15186 ChimerSeq FusionScan TCGA_RNA-Seq PKIG-NAPG PKIG chr20 43160619 + NAPG chr18 10530766 + Exonic hg19 STAD TCGA-BR-A453 2 5'UTR-CDS Inter-chr q13.12 p11.22 15187 ChimerSeq FusionScan TCGA_RNA-Seq FOXO1-UBQLN1 FOXO1 chr13 41239719 - UBQLN1 chr9 86280060 - Exonic hg19 STAD TCGA-BR-A453 2 In-Frame Inter-chr q14.11 Oncogene Tumor suppressor gene Transcription factor q21.32 15188 ChimerSeq FusionScan TCGA_RNA-Seq CRTC3-RGMA CRTC3 chr15 91073435 + RGMA chr15 93595737 - Exonic hg19 STAD TCGA-BR-A453 2 Out-of-Frame Intra-chr q26.1 q26.1 15189 ChimerSeq FusionScan TCGA_RNA-Seq SPPL3-TAF15 SPPL3 chr12 121341647 - TAF15 chr17 34160910 + Exonic hg19 STAD TCGA-BR-A453 2 In-Frame Inter-chr q24.31 q12 15190 ChimerSeq FusionScan TCGA_RNA-Seq NBR2-IFI35 NBR2 chr17 41283287 + IFI35 chr17 41164195 + Exonic hg19 STAD TCGA-BR-8372 3 5'UTR-CDS Intra-chr q21.31 q21.31 Seq+ 15191 ChimerSeq FusionScan TCGA_RNA-Seq BAG5-TPM4 BAG5 chr14 104028952 - TPM4 chr19 16192722 + Exonic hg19 STAD TCGA-BR-8372 2 5'UTR-CDS Inter-chr q32.33 p13.12 15192 ChimerSeq FusionScan TCGA_RNA-Seq CCDC99-GNAS CCDC99 chr5 169010893 + GNAS chr20 57470666 + Exonic hg19 STAD TCGA-BR-8372 2 5'UTR-5'UTR Inter-chr q13.32 Oncogene 15193 ChimerSeq FusionScan TCGA_RNA-Seq PLCG1-EYA2 PLCG1 chr20 39798909 + EYA2 chr20 45797786 + Exonic hg19 STAD TCGA-VQ-A8PH 8 In-Frame Intra-chr q12 Oncogene q13.12 Seq+ 15194 ChimerSeq FusionScan TCGA_RNA-Seq CTNNA1-REEP2 CTNNA1 chr5 138163407 + REEP2 chr5 137776704 + Exonic hg19 STAD TCGA-VQ-A8PH 6 Out-of-Frame Intra-chr q31.2 Oncogene q31.2 Seq+ 15195 ChimerSeq FusionScan TCGA_RNA-Seq RPP14-FLNB RPP14 chr3 58296318 + FLNB chr3 58154166 + Exonic hg19 STAD TCGA-VQ-A8PH 5 Out-of-Frame Intra-chr p14.3 p14.3 Seq+ 15196 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-PTCD3 RCC1 chr1 28834672 + PTCD3 chr2 86363643 + Exonic hg19 STAD TCGA-VQ-A8PH 2 5'UTR-CDS Inter-chr p35.3 p11.2 15197 ChimerSeq FusionScan TCGA_RNA-Seq PBRM1-GLT8D1 PBRM1 chr3 52702513 - GLT8D1 chr3 52734512 - Exonic hg19 STAD TCGA-VQ-A8PH 2 CDS-5'UTR Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 Seq+ 15198 ChimerSeq FusionScan TCGA_RNA-Seq GOLGA8A-PIP5K1C GOLGA8A chr15 34680033 - PIP5K1C chr19 3639014 - Exonic hg19 STAD TCGA-VQ-A8PH 2 Out-of-Frame Inter-chr q14 p13.3 15199 ChimerSeq FusionScan TCGA_RNA-Seq STAU1-MAP1LC3A STAU1 chr20 47768118 - MAP1LC3A chr20 33137708 + Exonic hg19 STAD TCGA-VQ-A8PH 2 CDS-5'UTR Intra-chr q13.13 q11.22 Seq+ 15200 ChimerSeq FusionScan TCGA_RNA-Seq RARA-WIPF2 RARA chr17 38474700 + WIPF2 chr17 38412642 + Exonic hg19 STAD TCGA-VQ-A8PH 2 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor q21.2 Seq+ 15201 ChimerSeq FusionScan TCGA_RNA-Seq RARA-WIPF2 RARA chr17 38487648 + WIPF2 chr17 38412642 + Exonic hg19 STAD TCGA-VQ-A8PH 2 CDS-5'UTR Intra-chr q21.2 Oncogene Transcription factor q21.2 Seq+ 15202 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 TGCT TCGA-2G-AAG5 2 Out-of-Frame Intra-chr q22.2 q22.2 15203 ChimerSeq FusionScan TCGA_RNA-Seq SF3B3-ADAM12 SF3B3 chr16 70604052 + ADAM12 chr10 127967557 - Exonic hg19 TGCT TCGA-2G-AAFI 2 In-Frame Inter-chr q22.1 q26.2 Seq+ 15204 ChimerSeq FusionScan TCGA_RNA-Seq SNX8-MAD1L1 SNX8 chr7 2353962 - MAD1L1 chr7 2108973 - Exonic hg19 TGCT TCGA-2G-AALP 2 Out-of-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 15205 ChimerSeq FusionScan TCGA_RNA-Seq CHST8-ZNF708 CHST8 chr19 34180297 + ZNF708 chr19 21477541 - Exonic hg19 TGCT TCGA-VF-A8AD 3 In-Frame Intra-chr q13.11 p12 Transcription factor 15206 ChimerSeq FusionScan TCGA_RNA-Seq WDTC1-SYTL1 WDTC1 chr1 27623647 + SYTL1 chr1 27673911 + Exonic hg19 TGCT TCGA-2G-AAFV 2 In-Frame Intra-chr p36.11 p36.11 15207 ChimerSeq FusionScan TCGA_RNA-Seq FCHSD2-GLYAT FCHSD2 chr11 72712034 - GLYAT chr11 58491984 - Exonic hg19 TGCT TCGA-SB-A76C 2 CDS-5'UTR Intra-chr q13.4 q12.1 Seq+ 15208 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-CHMP1A CPSF6 chr12 69656342 + CHMP1A chr16 89713739 - Exonic hg19 TGCT TCGA-2G-AAGK 2 3'UTR-3'UTR Inter-chr q15 q24.3 Seq+ 15209 ChimerSeq FusionScan TCGA_RNA-Seq SRPK1-CCL18 SRPK1 chr6 35888244 - CCL18 chr17 34397806 + Exonic hg19 TGCT TCGA-SB-A6J6 4 Out-of-Frame Inter-chr p21.31 CMGC:SRPK q12 Seq+ 15210 ChimerSeq FusionScan TCGA_RNA-Seq GNB1-LDHB GNB1 chr1 1756835 - LDHB chr12 21807611 - Exonic hg19 TGCT TCGA-2G-AAGP 3 CDS-5'UTR Inter-chr p36.33 p12.1 Seq+ 15211 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 TGCT TCGA-2G-AAGP 2 Out-of-Frame Intra-chr q22.2 q22.2 15212 ChimerSeq FusionScan TCGA_RNA-Seq MYO1F-CCL4L1 MYO1F chr19 8642190 - CCL4L1 chr17 34641449 + Exonic hg19 TGCT TCGA-S6-A8JY 2 Out-of-Frame Inter-chr p13.2 15213 ChimerSeq FusionScan TCGA_RNA-Seq LRP6-LRRC23 LRP6 chr12 12397195 - LRRC23 chr12 7015572 + Exonic hg19 TGCT TCGA-S6-A8JY 2 In-Frame Intra-chr p13.31 Seq+ 15214 ChimerSeq FusionScan TCGA_RNA-Seq FBLIM1-DDI2 FBLIM1 chr1 16085343 + DDI2 chr1 15986331 + Exonic hg19 TGCT TCGA-2G-AAM2 2 5'UTR-3'UTR Intra-chr p36.21 p36.21 Seq+ 15215 ChimerSeq FusionScan TCGA_RNA-Seq TYW1B-GTF2IRD2B TYW1B chr7 72178578 - GTF2IRD2B chr7 74528190 + Exonic hg19 TGCT TCGA-2G-AAFM 4 Out-of-Frame Intra-chr q11.23 q11.23 Transcription factor 15216 ChimerSeq FusionScan TCGA_RNA-Seq TYW1-GTF2IRD2B TYW1 chr7 66563705 + GTF2IRD2B chr7 74528190 + Exonic hg19 TGCT TCGA-2G-AAFM 4 Out-of-Frame Intra-chr q11.21 q11.23 Transcription factor 15217 ChimerSeq FusionScan TCGA_RNA-Seq TYW1B-GTF2IRD2 TYW1B chr7 72178578 - GTF2IRD2 chr7 74248066 - Exonic hg19 TGCT TCGA-2G-AAFM 4 Out-of-Frame Intra-chr q11.23 q11.23 Transcription factor 15218 ChimerSeq FusionScan TCGA_RNA-Seq TNK2-MFI2 TNK2 chr3 195635355 - MFI2 chr3 196737665 - Exonic hg19 TGCT TCGA-XE-A8H4 2 5'UTR-CDS Intra-chr q29 Oncogene Seq+ 15219 ChimerSeq FusionScan TCGA_RNA-Seq YARS-ZBTB8OS YARS chr1 33256762 - ZBTB8OS chr1 33093145 - Exonic hg19 TGCT TCGA-2G-AAG8 5 Out-of-Frame Intra-chr p35.1 p35.1 Seq+ 15220 ChimerSeq FusionScan TCGA_RNA-Seq YARS-ZBTB8OS YARS chr1 33256762 - ZBTB8OS chr1 33097480 - Exonic hg19 TGCT TCGA-2G-AAG8 5 In-Frame Intra-chr p35.1 p35.1 Seq+ 15221 ChimerSeq FusionScan TCGA_RNA-Seq XBP1-TTC28 XBP1 chr22 29192034 - TTC28 chr22 28559587 - Exonic hg19 TGCT TCGA-2X-A9D6 2 In-Frame Intra-chr q12.1 Transcription factor q12.1 Seq+ 15222 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 TGCT TCGA-2G-AALZ 2 Out-of-Frame Intra-chr q22.2 q22.2 15223 ChimerSeq FusionScan TCGA_RNA-Seq XRCC1-ETHE1 XRCC1 chr19 44079061 - ETHE1 chr19 44015718 - Exonic hg19 TGCT TCGA-SN-A84X 10 In-Frame Intra-chr q13.31 q13.31 15224 ChimerSeq FusionScan TCGA_RNA-Seq JARID2-NUDC JARID2 chr6 15246815 + NUDC chr1 27250579 + Exonic hg19 TGCT TCGA-2G-AAL7 2 In-Frame Inter-chr p22.3 p36.11 Seq+ 15225 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 TGCT TCGA-2G-AAGY 3 Out-of-Frame Intra-chr q22.2 q22.2 15226 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 TGCT TCGA-2G-AAGM 2 Out-of-Frame Intra-chr q22.2 q22.2 15227 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-LARP4 RCC1 chr1 28834672 + LARP4 chr12 50854917 + Exonic hg19 TGCT TCGA-YU-A90W 2 5'UTR-5'UTR Inter-chr p35.3 q13.12 15228 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 TGCT TCGA-2G-AAH4 2 Out-of-Frame Intra-chr q22.2 q22.2 15229 ChimerSeq FusionScan TCGA_RNA-Seq NIT2-LNP1 NIT2 chr3 100060005 + LNP1 chr3 100148540 + Exonic hg19 TGCT TCGA-2G-AAGT 6 CDS-5'UTR Intra-chr q12.2 Tumor suppressor gene q12.2 Seq+ 15230 ChimerSeq FusionScan TCGA_RNA-Seq LONP2-PLEKHB2 LONP2 chr16 48337216 + PLEKHB2 chr2 131878506 + Exonic hg19 TGCT TCGA-2G-AAH8 3 CDS-5'UTR Inter-chr q12.1 q21.1 Seq+ 15231 ChimerSeq FusionScan TCGA_RNA-Seq ZNF90-C3orf26 ZNF90 chr19 20188944 + C3orf26 chr3 99865816 + Exonic hg19 TGCT TCGA-2G-AAKL 7 Out-of-Frame Inter-chr p12 Transcription factor Seq+ 15232 ChimerSeq FusionScan TCGA_RNA-Seq ZNF138-C3orf26 ZNF138 chr7 64254949 + C3orf26 chr3 99865816 + Exonic hg19 TGCT TCGA-2G-AAKL 6 Out-of-Frame Inter-chr q11.21 Transcription factor 15233 ChimerSeq FusionScan TCGA_RNA-Seq ATP2B1-YAF2 ATP2B1 chr12 90021454 - YAF2 chr12 42593037 - Exonic hg19 TGCT TCGA-2G-AAGG 2 CDS-3'UTR Intra-chr q21.33 q12 Seq+ 15234 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD28-HACL1 ANKRD28 chr3 15900883 - HACL1 chr3 15610093 - Exonic hg19 TGCT TCGA-2G-AAGG 2 In-Frame Intra-chr p25.1 p25.1 Seq+ 15235 ChimerSeq FusionScan TCGA_RNA-Seq FGD4-C12orf35 FGD4 chr12 32751520 + C12orf35 chr12 32140172 + Exonic hg19 TGCT TCGA-YU-A90Y 2 Out-of-Frame Intra-chr p11.21 Seq+ 15236 ChimerSeq FusionScan TCGA_RNA-Seq NET1-RIMKLB NET1 chr10 5471192 + RIMKLB chr12 8925916 + Exonic hg19 TGCT TCGA-YU-A94I 2 Out-of-Frame Inter-chr p15.1 p13.31 Seq+ 15237 ChimerSeq FusionScan TCGA_RNA-Seq ABCC5-SPG7 ABCC5 chr3 183677520 - SPG7 chr16 89611055 + Exonic hg19 TGCT TCGA-ZM-AA0B 2 In-Frame Inter-chr q27.1 q24.3 15238 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 TGCT TCGA-2G-AAM4 2 Out-of-Frame Intra-chr q22.2 q22.2 15239 ChimerSeq FusionScan TCGA_RNA-Seq EDC3-SLC6A11 EDC3 chr15 74948073 - SLC6A11 chr3 10967689 + Exonic hg19 TGCT TCGA-2G-AAGA 2 In-Frame Inter-chr q24.1 p25.3 Seq+ 15240 ChimerSeq FusionScan TCGA_RNA-Seq PPFIBP1-SLCO1B1 PPFIBP1 chr12 27677298 + SLCO1B1 chr12 21294447 + Exonic hg19 TGCT TCGA-2G-AAKH 2 5'UTR-5'UTR Intra-chr p11.23 p12.1 Seq+ 15241 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 TGCT TCGA-2G-AAL5 3 Out-of-Frame Intra-chr q22.2 q22.2 15242 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 TGCT TCGA-2G-AALG 3 Out-of-Frame Intra-chr q22.2 q22.2 15243 ChimerSeq FusionScan TCGA_RNA-Seq LDLR-SMARCA4 LDLR chr19 11227674 + SMARCA4 chr19 11169463 + Exonic hg19 TGCT TCGA-2G-AALG 2 In-Frame Intra-chr p13.2 p13.2 Oncogene Tumor suppressor gene Seq+ 15244 ChimerSeq FusionScan TCGA_RNA-Seq SON-ITSN1 SON chr21 34948199 + ITSN1 chr21 35183278 + Exonic hg19 TGCT TCGA-XE-AAOC 3 In-Frame Intra-chr q22.11 Transcription factor q22.11 Seq+ 15245 ChimerSeq FusionScan TCGA_RNA-Seq MAU2-KCTD5 MAU2 chr19 19460245 + KCTD5 chr16 2757298 + Exonic hg19 TGCT TCGA-VF-A8AE 2 In-Frame Inter-chr p13.11 p13.3 15246 ChimerSeq FusionScan TCGA_RNA-Seq C7orf10-RALA C7orf10 chr7 40174719 + RALA chr7 39726229 + Exonic hg19 TGCT TCGA-2G-AAF6 3 CDS-5'UTR Intra-chr p14.1 Seq+ 15247 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-CHMP1A CPSF6 chr12 69656342 + CHMP1A chr16 89713739 - Exonic hg19 THCA TCGA-ET-A2N4 2 3'UTR-3'UTR Inter-chr q15 q24.3 Seq+ 15248 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPF-GNAI3 HNRNPF chr10 43904578 - GNAI3 chr1 110116358 + Exonic hg19 THCA TCGA-ET-A2N4 2 5'UTR-CDS Inter-chr q11.21 p13.3 15249 ChimerSeq FusionScan TCGA_RNA-Seq TG-SLA TG chr8 133913798 + SLA chr8 134050982 - Exonic hg19 THCA TCGA-BJ-A192 5 Out-of-Frame Intra-chr q24.22 q24.22 Seq+ 15250 ChimerSeq FusionScan TCGA_RNA-Seq PAX8-PPARG PAX8 chr2 113994177 - PPARG chr3 12421202 + Exonic hg19 THCA TCGA-DE-A4M9 7 In-Frame Inter-chr q14.1 Oncogene Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 15251 ChimerSeq FusionScan TCGA_RNA-Seq PAX8-PPARG PAX8 chr2 113999127 - PPARG chr3 12421202 + Exonic hg19 THCA TCGA-DE-A4M9 2 Out-of-Frame Inter-chr q14.1 Oncogene Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 15252 ChimerSeq FusionScan TCGA_RNA-Seq FDPS-CHD9 FDPS chr1 155282186 + CHD9 chr16 53189837 + Exonic hg19 THCA TCGA-EL-A3H1 2 5'UTR-5'UTR Inter-chr q22 q12.2 15253 ChimerSeq FusionScan TCGA_RNA-Seq RAI1-EIF5A RAI1 chr17 17627473 + EIF5A chr17 7212933 + Exonic hg19 THCA TCGA-KS-A4I3 2 5'UTR-5'UTR Intra-chr p11.2 p13.1 15254 ChimerSeq FusionScan TCGA_RNA-Seq RANBP17-PGBD2 RANBP17 chr5 170395381 + PGBD2 chr1 249211477 + Exonic hg19 THCA TCGA-FY-A4B0 2 CDS-5'UTR Inter-chr q35.1 q44 15255 ChimerSeq FusionScan TCGA_RNA-Seq SFTA3-TSHR SFTA3 chr14 36982316 - TSHR chr14 81606022 + Exonic hg19 THCA TCGA-EM-A3FJ 2 Out-of-Frame Intra-chr q13.3 q31.1 Oncogene 15256 ChimerSeq FusionScan TCGA_RNA-Seq TMEM242-PREP TMEM242 chr6 157739813 - PREP chr6 105845802 - Exonic hg19 THCA TCGA-CE-A13K 2 In-Frame Intra-chr q25.3 q21 Seq+ 15257 ChimerSeq FusionScan TCGA_RNA-Seq BACE2-FAM3B BACE2 chr21 42629253 + FAM3B chr21 42694849 + Exonic hg19 THCA TCGA-EM-A2CJ 2 In-Frame Intra-chr q22.2 q22.3 Seq+ 15258 ChimerSeq FusionScan TCGA_RNA-Seq DLG5-RET DLG5 chr10 79588639 - RET chr10 43612031 + Exonic hg19 THCA TCGA-DE-A69K 5 In-Frame Intra-chr q22.3 q11.21 TK:Ret Oncogene Seq+ 15259 ChimerSeq FusionScan TCGA_RNA-Seq ZNF672-FCHO2 ZNF672 chr1 249139861 + FCHO2 chr5 72359667 + Exonic hg19 THCA TCGA-FY-A3WA 2 5'UTR-CDS Inter-chr q44 Transcription factor q13.2 15260 ChimerSeq FusionScan TCGA_RNA-Seq CHD8-HNRNPC CHD8 chr14 21905352 - HNRNPC chr14 21702388 - Exonic hg19 THCA TCGA-EM-A4FQ 2 5'UTR-5'UTR Intra-chr q11.2 q11.2 Seq+ 15261 ChimerSeq FusionScan TCGA_RNA-Seq MATR3-SIL1 MATR3 chr5 138629494 + SIL1 chr5 138463542 - Exonic hg19 THCA TCGA-ET-A25P 2 5'UTR-5'UTR Intra-chr q31.2 q31.2 15262 ChimerSeq FusionScan TCGA_RNA-Seq HMGA2-MSRB3 HMGA2 chr12 66232349 + MSRB3 chr12 65856934 + Exonic hg19 THCA TCGA-DE-A4MD 5 In-Frame Intra-chr q14.3 Transcription factor q14.3 Seq+ 15263 ChimerSeq FusionScan TCGA_RNA-Seq AKAP13-RET AKAP13 chr15 86284726 + RET chr10 43612031 + Exonic hg19 THCA TCGA-FK-A3SG 4 In-Frame Inter-chr q25.3 q11.21 TK:Ret Oncogene Seq+ 15264 ChimerSeq FusionScan TCGA_RNA-Seq AGRN-IRF3 AGRN chr1 970704 + IRF3 chr19 50163090 - Exonic hg19 THCA TCGA-FK-A3SG 2 In-Frame Inter-chr p36.33 q13.33 Tumor suppressor gene Transcription factor 15265 ChimerSeq FusionScan TCGA_RNA-Seq ATP6V1A-ZNRF1 ATP6V1A chr3 113465960 + ZNRF1 chr16 75138681 + Exonic hg19 THCA TCGA-BJ-A2P4 2 5'UTR-CDS Inter-chr q13.31 q23.1 15266 ChimerSeq FusionScan TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12006495 + NTRK3 chr15 88576276 - Exonic hg19 THCA TCGA-CE-A27D 2 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 15267 ChimerSeq FusionScan TCGA_RNA-Seq SKP1-PCBD2 SKP1 chr5 133512545 - PCBD2 chr5 134294729 + Exonic hg19 THCA TCGA-CE-A27D 2 5'UTR-CDS Intra-chr q31.1 q31.1 15268 ChimerSeq FusionScan TCGA_RNA-Seq GPR155-HPCAL1 GPR155 chr2 175351600 - HPCAL1 chr2 10536960 + Exonic hg19 THCA TCGA-EM-A4FO 2 5'UTR-5'UTR Intra-chr q31.1 p25.1 15269 ChimerSeq FusionScan TCGA_RNA-Seq TTC28-TAX1BP1 TTC28 chr22 28692185 - TAX1BP1 chr7 27867356 + Exonic hg19 THCA TCGA-L6-A4ET 2 In-Frame Inter-chr q12.1 p15.2 15270 ChimerSeq FusionScan TCGA_RNA-Seq CBY1-GNAI3 CBY1 chr22 39052755 + GNAI3 chr1 110116358 + Exonic hg19 THCA TCGA-BJ-A45J 2 5'UTR-CDS Inter-chr q13.1 p13.3 15271 ChimerSeq FusionScan TCGA_RNA-Seq E2F3-FARS2 E2F3 chr6 20404063 + FARS2 chr6 5404774 + Exonic hg19 THCA TCGA-DJ-A2PU 2 In-Frame Intra-chr p22.3 Tumor suppressor gene Transcription factor p25.1 15272 ChimerSeq FusionScan TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665879 - RET chr10 43612031 + Exonic hg19 THCA TCGA-ET-A3DR 4 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 15273 ChimerSeq FusionScan TCGA_RNA-Seq C9orf3-GMDS C9orf3 chr9 97767898 + GMDS chr6 1930464 - Exonic hg19 THCA TCGA-BJ-A28V 2 Out-of-Frame Inter-chr q22.32 p25.3 15274 ChimerSeq FusionScan TCGA_RNA-Seq RNF144B-DEK RNF144B chr6 18399930 + DEK chr6 18237747 - Exonic hg19 THCA TCGA-BJ-A28V 2 In-Frame Intra-chr p22.3 p22.3 Oncogene 15275 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-RET TBL1XR1 chr3 176765087 - RET chr10 43612031 + Exonic hg19 THCA TCGA-ET-A40R 3 In-Frame Inter-chr q26.32 q11.21 TK:Ret Oncogene Seq+ 15276 ChimerSeq FusionScan TCGA_RNA-Seq EIF3C-FERMT3 EIF3C chr16 28734872 + FERMT3 chr11 63990519 + Exonic hg19 THCA TCGA-ET-A2MY 2 In-Frame Inter-chr p11.2 q13.1 15277 ChimerSeq FusionScan TCGA_RNA-Seq RNF144B-SRSF4 RNF144B chr6 18387861 + SRSF4 chr1 29481422 - Exonic hg19 THCA TCGA-FE-A233 2 5'UTR-CDS Inter-chr p22.3 p35.3 15278 ChimerSeq FusionScan TCGA_RNA-Seq TUSC3-XPO7 TUSC3 chr8 15531345 + XPO7 chr8 21824367 + Exonic hg19 THCA TCGA-DJ-A2PN 2 In-Frame Intra-chr p22 p21.3 15279 ChimerSeq FusionScan TCGA_RNA-Seq NOTCH3-CAPN2 NOTCH3 chr19 15280896 - CAPN2 chr1 223946971 + Exonic hg19 THCA TCGA-DJ-A2PN 2 In-Frame Inter-chr p13.12 Oncogene Tumor suppressor gene q41 15280 ChimerSeq FusionScan TCGA_RNA-Seq NCOR1-RHOU NCOR1 chr17 16097775 - RHOU chr1 228873419 + Exonic hg19 THCA TCGA-EM-A2OX 4 Out-of-Frame Inter-chr p11.2 Oncogene q42.13 Seq+ 15281 ChimerSeq FusionScan TCGA_RNA-Seq NEDD4L-MBD2 NEDD4L chr18 55711940 + MBD2 chr18 51715381 - Exonic hg19 THCA TCGA-ET-A40P 2 In-Frame Intra-chr q21.31 Tumor suppressor gene q21.2 Transcription factor 15282 ChimerSeq FusionScan TCGA_RNA-Seq FAM60A-MYL12B FAM60A chr12 31478957 - MYL12B chr18 3272881 + Exonic hg19 THCA TCGA-DJ-A3V3 2 5'UTR-5'UTR Inter-chr p11.31 15283 ChimerSeq FusionScan TCGA_RNA-Seq ZNF516-TXNL4A ZNF516 chr18 74207099 - TXNL4A chr18 77737701 - Exonic hg19 THCA TCGA-DJ-A3V3 2 5'UTR-CDS Intra-chr q23 Transcription factor q23 15284 ChimerSeq FusionScan TCGA_RNA-Seq SQSTM1-NTRK1 SQSTM1 chr5 179252226 + NTRK1 chr1 156844362 + Exonic hg19 THCA TCGA-ET-A40S 9 In-Frame Inter-chr q35.3 q23.1 Oncogene KB Pub Seq+ 15285 ChimerSeq FusionScan TCGA_RNA-Seq PRCC-TMED5 PRCC chr1 156738031 + TMED5 chr1 93625783 - Exonic hg19 THCA TCGA-ET-A40S 3 In-Frame Intra-chr q23.1 p22.1 Seq+ 15286 ChimerSeq FusionScan TCGA_RNA-Seq CCZ1-ASNS CCZ1 chr7 5940563 + ASNS chr7 97499125 - Exonic hg19 THCA TCGA-EM-A3O7 2 CDS-5'UTR Intra-chr p22.1 q21.3 15287 ChimerSeq FusionScan TCGA_RNA-Seq SSFA2-KHDRBS2 SSFA2 chr2 182787139 + KHDRBS2 chr6 62442669 - Exonic hg19 THCA TCGA-BJ-A0ZC 2 In-Frame Inter-chr q31.3 q11.1 15288 ChimerSeq FusionScan TCGA_RNA-Seq INTS3-CHTOP INTS3 chr1 153730239 + CHTOP chr1 153614718 + Exonic hg19 THCA TCGA-EM-A3FO 2 In-Frame Intra-chr q21.3 q21.3 KB Pub Seq+ 15289 ChimerSeq FusionScan TCGA_RNA-Seq STK24-TCERG1L STK24 chr13 99228998 - TCERG1L chr10 133058707 - Exonic hg19 THCA TCGA-EM-A3FO 2 Out-of-Frame Inter-chr q32.2 q26.3 15290 ChimerSeq FusionScan TCGA_RNA-Seq EGLN2-RPL13 EGLN2 chr19 41307320 + RPL13 chr16 89629291 + Exonic hg19 THCA TCGA-DJ-A1QG 2 In-Frame Inter-chr q13.2 q24.3 15291 ChimerSeq FusionScan TCGA_RNA-Seq TGFB2-WLS TGFB2 chr1 218536759 + WLS chr1 68659910 - Exonic hg19 THCA TCGA-EL-A3D0 2 In-Frame Intra-chr q41 p31.3 15292 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D5-ANKRD28 TBC1D5 chr3 17783972 - ANKRD28 chr3 15836813 - Exonic hg19 THCA TCGA-DJ-A13S 2 5'UTR-5'UTR Intra-chr p24.3 p25.1 Seq+ 15293 ChimerSeq FusionScan TCGA_RNA-Seq TPM4-NTRK1 TPM4 chr19 16204563 + NTRK1 chr1 156844362 + Exonic hg19 THCA TCGA-EL-A3D4 8 In-Frame Inter-chr p13.12 q23.1 Oncogene 15294 ChimerSeq FusionScan TCGA_RNA-Seq TP53BP1-AP1G1 TP53BP1 chr15 43707791 - AP1G1 chr16 71773244 - Exonic hg19 THCA TCGA-DJ-A3V2 2 In-Frame Inter-chr q15.3 Tumor suppressor gene q22.2 15295 ChimerSeq FusionScan TCGA_RNA-Seq USP54-HMGCS1 USP54 chr10 75265065 - HMGCS1 chr5 43293075 - Exonic hg19 THCA TCGA-DJ-A3V2 2 Out-of-Frame Inter-chr q22.2 p12 15296 ChimerSeq FusionScan TCGA_RNA-Seq HMGA2-MSRB3 HMGA2 chr12 66232349 + MSRB3 chr12 65856934 + Exonic hg19 THCA TCGA-DE-A4MD 5 In-Frame Intra-chr q14.3 Transcription factor q14.3 Seq+ 15297 ChimerSeq FusionScan TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665879 - RET chr10 43612031 + Exonic hg19 THCA TCGA-E3-A3E0 2 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 15298 ChimerSeq FusionScan TCGA_RNA-Seq NCOA4-RET NCOA4 chr10 51582939 + RET chr10 43612031 + Exonic hg19 THCA TCGA-EM-A2CU 3 In-Frame Intra-chr q11.22 Oncogene Tumor suppressor gene q11.21 TK:Ret Oncogene KB Pub Seq+ 15299 ChimerSeq FusionScan TCGA_RNA-Seq MAT2B-CCT2 MAT2B chr5 162939202 + CCT2 chr12 69990935 + Exonic hg19 THCA TCGA-ET-A3BT 2 Out-of-Frame Inter-chr q34 q15 15300 ChimerSeq FusionScan TCGA_RNA-Seq NCOA4-RET NCOA4 chr10 51582939 + RET chr10 43612031 + Exonic hg19 THCA TCGA-DE-A3KN 3 In-Frame Intra-chr q11.22 Oncogene Tumor suppressor gene q11.21 TK:Ret Oncogene KB Pub Seq+ 15301 ChimerSeq FusionScan TCGA_RNA-Seq DBP-PTTG1IP DBP chr19 49138836 - PTTG1IP chr21 46281186 - Exonic hg19 THCA TCGA-DJ-A3V5 2 Out-of-Frame Inter-chr q13.33 Transcription factor q22.3 15302 ChimerSeq FusionScan TCGA_RNA-Seq ANAPC10-MRPL1 ANAPC10 chr4 145985723 - MRPL1 chr4 78870950 + Exonic hg19 THCA TCGA-BJ-A2N9 2 In-Frame Intra-chr q31.21 q21.1 15303 ChimerSeq FusionScan TCGA_RNA-Seq AGXT2L2-EXOC3L1 AGXT2L2 chr5 177659492 - EXOC3L1 chr16 67221041 - Exonic hg19 THCA TCGA-EL-A3TB 2 In-Frame Inter-chr q22.1 15304 ChimerSeq FusionScan TCGA_RNA-Seq TGIF2-CIRBP TGIF2 chr20 35201927 + CIRBP chr19 1270926 + Exonic hg19 THCA TCGA-EM-A22K 2 5'UTR-5'UTR Inter-chr q11.23 Transcription factor p13.3 15305 ChimerSeq FusionScan TCGA_RNA-Seq CCDC82-GNAI3 CCDC82 chr11 96123007 - GNAI3 chr1 110116358 + Exonic hg19 THCA TCGA-BJ-A45H 2 5'UTR-CDS Inter-chr q21 p13.3 15306 ChimerSeq FusionScan TCGA_RNA-Seq HERC3-AFF1 HERC3 chr4 89571150 + AFF1 chr4 88052944 + Exonic hg19 THCA TCGA-DJ-A3VM 2 In-Frame Intra-chr q22.1 q21.3 Oncogene 15307 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 THCA TCGA-FY-A40M 2 Out-of-Frame Intra-chr q22.2 q22.2 15308 ChimerSeq FusionScan TCGA_RNA-Seq RYBP-C3orf58 RYBP chr3 72495646 - C3orf58 chr3 143704384 + Exonic hg19 THCA TCGA-DJ-A1QM 2 Out-of-Frame Intra-chr q24 15309 ChimerSeq FusionScan TCGA_RNA-Seq PAX8-PPARG PAX8 chr2 113994177 - PPARG chr3 12421202 + Exonic hg19 THCA TCGA-ET-A39N 6 In-Frame Inter-chr q14.1 Oncogene Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 15310 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHA5-PCP4 PLEKHA5 chr12 19285384 + PCP4 chr21 41270400 + Exonic hg19 THCA TCGA-EL-A3H5 2 Out-of-Frame Inter-chr p12.3 q22.2 15311 ChimerSeq FusionScan TCGA_RNA-Seq HIVEP1-LUC7L2 HIVEP1 chr6 12015901 + LUC7L2 chr7 139106908 + Exonic hg19 THCA TCGA-EL-A3T1 2 Out-of-Frame Inter-chr p24.1 Tumor suppressor gene Transcription factor q34 15312 ChimerSeq FusionScan TCGA_RNA-Seq KAZN-PRDM2 KAZN chr1 15287371 + PRDM2 chr1 14142921 + Exonic hg19 THCA TCGA-EM-A4FU 2 In-Frame Intra-chr p36.21 p36.21 Tumor suppressor gene Transcription factor 15313 ChimerSeq FusionScan TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12006495 + NTRK3 chr15 88576276 - Exonic hg19 THCA TCGA-DJ-A4V0 2 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 15314 ChimerSeq FusionScan TCGA_RNA-Seq KRAS-MNAT1 KRAS chr12 25398207 - MNAT1 chr14 61346431 + Exonic hg19 THCA TCGA-ET-A3DT 2 In-Frame Inter-chr p12.1 Oncogene q23.1 15315 ChimerSeq FusionScan TCGA_RNA-Seq TMEM30A-ZNF259 TMEM30A chr6 75968495 - ZNF259 chr11 116655164 - Exonic hg19 THCA TCGA-ET-A3DT 2 In-Frame Inter-chr q14.1 15316 ChimerSeq FusionScan TCGA_RNA-Seq EHMT1-TGIF2 EHMT1 chr9 140513501 + TGIF2 chr20 35207143 + Exonic hg19 THCA TCGA-ET-A3DT 2 CDS-5'UTR Inter-chr q34.3 q11.23 Transcription factor 15317 ChimerSeq FusionScan TCGA_RNA-Seq INTS3-CHTOP INTS3 chr1 153730239 + CHTOP chr1 153614718 + Exonic hg19 THCA TCGA-EM-A3FO 3 In-Frame Intra-chr q21.3 q21.3 KB Pub Seq+ 15318 ChimerSeq FusionScan TCGA_RNA-Seq STK24-TCERG1L STK24 chr13 99228998 - TCERG1L chr10 133058707 - Exonic hg19 THCA TCGA-EM-A3FO 2 Out-of-Frame Inter-chr q32.2 q26.3 15319 ChimerSeq FusionScan TCGA_RNA-Seq DRAP1-RHBDD3 DRAP1 chr11 65687323 + RHBDD3 chr22 29656853 - Exonic hg19 THCA TCGA-BJ-A191 2 In-Frame Inter-chr q13.1 Transcription factor q12.2 15320 ChimerSeq FusionScan TCGA_RNA-Seq ZNF672-FCHO2 ZNF672 chr1 249139861 + FCHO2 chr5 72359667 + Exonic hg19 THCA TCGA-FY-A3WA 2 5'UTR-CDS Inter-chr q44 Transcription factor q13.2 15321 ChimerSeq FusionScan TCGA_RNA-Seq EIF3C-FERMT3 EIF3C chr16 28734872 + FERMT3 chr11 63990519 + Exonic hg19 THCA TCGA-ET-A2MY 2 In-Frame Inter-chr p11.2 q13.1 15322 ChimerSeq FusionScan TCGA_RNA-Seq PDE8B-MSANTD3 PDE8B chr5 76507089 + MSANTD3 chr9 103204187 + Exonic hg19 THCA TCGA-EL-A4KD 2 CDS-5'UTR Inter-chr q13.3 q31.1 Transcription factor 15323 ChimerSeq FusionScan TCGA_RNA-Seq SSBP2-NTRK1 SSBP2 chr5 80742686 - NTRK1 chr1 156845311 + Exonic hg19 THCA TCGA-CE-A3MD 4 In-Frame Inter-chr q14.1 Tumor suppressor gene q23.1 Oncogene Seq+ 15324 ChimerSeq FusionScan TCGA_RNA-Seq VPS8-EIF4G1 VPS8 chr3 184530013 + EIF4G1 chr3 184049053 + Exonic hg19 THCA TCGA-EL-A3H3 6 5'UTR-CDS Intra-chr q27.2 q27.1 Seq+ 15325 ChimerSeq FusionScan TCGA_RNA-Seq NCOA4-RET NCOA4 chr10 51582939 + RET chr10 43612031 + Exonic hg19 THCA TCGA-EL-A3H3 4 In-Frame Intra-chr q11.22 Oncogene Tumor suppressor gene q11.21 TK:Ret Oncogene KB Pub Seq+ 15326 ChimerSeq FusionScan TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665879 - RET chr10 43612031 + Exonic hg19 THCA TCGA-FK-A3SE 2 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 15327 ChimerSeq FusionScan TCGA_RNA-Seq ACSS1-DOCK9 ACSS1 chr20 25011394 - DOCK9 chr13 99508285 - Exonic hg19 THCA TCGA-KS-A4I7 2 Out-of-Frame Inter-chr p11.21 q32.3 15328 ChimerSeq FusionScan TCGA_RNA-Seq TGIF2-CIRBP TGIF2 chr20 35201927 + CIRBP chr19 1270926 + Exonic hg19 THCA TCGA-EM-A22K 2 5'UTR-5'UTR Inter-chr q11.23 Transcription factor p13.3 15329 ChimerSeq FusionScan TCGA_RNA-Seq BRAF-AGK BRAF chr7 140500161 - AGK chr7 141292945 + Exonic hg19 THCA TCGA-DJ-A2PX 6 In-Frame Intra-chr q34 TKL:RAF Oncogene Seq+ 15330 ChimerSeq FusionScan TCGA_RNA-Seq TSHR-YAP1 TSHR chr14 81422194 + YAP1 chr11 102033186 + Exonic hg19 THCA TCGA-DJ-A2PX 2 In-Frame Inter-chr q31.1 Oncogene q22.1 Tumor suppressor gene 15331 ChimerSeq FusionScan TCGA_RNA-Seq PRDM2-PEX14 PRDM2 chr1 14075982 + PEX14 chr1 10659294 + Exonic hg19 THCA TCGA-ET-A3BS 2 In-Frame Intra-chr p36.21 Tumor suppressor gene Transcription factor p36.22 15332 ChimerSeq FusionScan TCGA_RNA-Seq BCOR-B2M BCOR chrX 40036259 - B2M chr15 45007620 + Exonic hg19 THCA TCGA-ET-A3BS 2 5'UTR-CDS Inter-chr p11.4 Oncogene Oncogene 15333 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1L1-CXCR7 WHSC1L1 chr8 38239316 - CXCR7 chr2 237489082 + Exonic hg19 THCA TCGA-ET-A3BS 2 5'UTR-5'UTR Inter-chr p11.23 Tumor suppressor gene 15334 ChimerSeq FusionScan TCGA_RNA-Seq UTRN-USP18 UTRN chr6 145142154 + USP18 chr22 18659538 + Exonic hg19 THCA TCGA-ET-A3BS 2 In-Frame Inter-chr q24.2 q11.21 15335 ChimerSeq FusionScan TCGA_RNA-Seq FRMD3-NTRK2 FRMD3 chr9 86152999 - NTRK2 chr9 87482157 + Exonic hg19 THCA TCGA-ET-A39T 2 Out-of-Frame Intra-chr q21.32 q21.33 Oncogene 15336 ChimerSeq FusionScan TCGA_RNA-Seq SOS1-MAP4K3 SOS1 chr2 39283842 - MAP4K3 chr2 39605264 - Exonic hg19 THCA TCGA-EL-A3H8 2 In-Frame Intra-chr p22.1 p22.1 Seq+ 15337 ChimerSeq FusionScan TCGA_RNA-Seq ZMYND11-PSMB7 ZMYND11 chr10 226068 + PSMB7 chr9 127146935 - Exonic hg19 THCA TCGA-EL-A3GO 2 Out-of-Frame Inter-chr p15.3 Tumor suppressor gene q33.3 15338 ChimerSeq FusionScan TCGA_RNA-Seq TMUB2-MBD3 TMUB2 chr17 42264477 + MBD3 chr19 1585213 - Exonic hg19 THCA TCGA-EL-A3GO 2 5'UTR-CDS Inter-chr q21.31 p13.3 Transcription factor 15339 ChimerSeq FusionScan TCGA_RNA-Seq TADA2B-TBC1D14 TADA2B chr4 7045576 + TBC1D14 chr4 6925099 + Exonic hg19 THCA TCGA-DJ-A13X 2 CDS-5'UTR Intra-chr p16.1 p16.1 15340 ChimerSeq FusionScan TCGA_RNA-Seq PAX8-PPARG PAX8 chr2 113994177 - PPARG chr3 12421202 + Exonic hg19 THCA TCGA-EM-A3AJ 7 In-Frame Inter-chr q14.1 Oncogene Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 15341 ChimerSeq FusionScan TCGA_RNA-Seq PPARG-PAX8 PPARG chr3 12353952 + PAX8 chr2 113984833 - Exonic hg19 THCA TCGA-EM-A3AJ 2 5'UTR-CDS Inter-chr p25.2 Oncogene Tumor suppressor gene Transcription factor q14.1 Oncogene Transcription factor KB Seq+ 15342 ChimerSeq FusionScan TCGA_RNA-Seq C3orf26-TMEM45A C3orf26 chr3 99536887 + TMEM45A chr3 100295768 + Exonic hg19 THCA TCGA-EL-A3ZO 2 Out-of-Frame Intra-chr q12.2 15343 ChimerSeq FusionScan TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665879 - RET chr10 43612031 + Exonic hg19 THCA TCGA-DJ-A4UQ 3 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 15344 ChimerSeq FusionScan TCGA_RNA-Seq USP34-C2orf74 USP34 chr2 61454201 - C2orf74 chr2 61389976 + Exonic hg19 THCA TCGA-EM-A2P2 2 In-Frame Intra-chr p15 p15 Seq+ 15345 ChimerSeq FusionScan TCGA_RNA-Seq BCAT2-AK1 BCAT2 chr19 49314240 - AK1 chr9 130630791 - Exonic hg19 THCA TCGA-IM-A3ED 2 In-Frame Inter-chr q13.33 q34.11 15346 ChimerSeq FusionScan TCGA_RNA-Seq FGFR2-OFD1 FGFR2 chr10 123243211 - OFD1 chrX 13754596 + Exonic hg19 THCA TCGA-BJ-A0Z0 3 In-Frame Inter-chr q26.13 TK:FGFR Oncogene p22.2 Seq+ 15347 ChimerSeq FusionScan TCGA_RNA-Seq YWHAZ-SRI YWHAZ chr8 101964156 - SRI chr7 87840240 - Exonic hg19 THCA TCGA-ET-A3DO 2 5'UTR-CDS Inter-chr q22.3 q21.12 15348 ChimerSeq FusionScan TCGA_RNA-Seq DCBLD2-NIT2 DCBLD2 chr3 98526924 - NIT2 chr3 100071247 + Exonic hg19 THCA TCGA-FY-A4B3 2 In-Frame Intra-chr q12.1 q12.2 Tumor suppressor gene 15349 ChimerSeq FusionScan TCGA_RNA-Seq SYNE2-NAP1L4 SYNE2 chr14 64375945 + NAP1L4 chr11 2981139 - Exonic hg19 THCA TCGA-IM-A3EB 2 Out-of-Frame Inter-chr q23.2 15350 ChimerSeq FusionScan TCGA_RNA-Seq KAT7-IGF2BP1 KAT7 chr17 47886570 + IGF2BP1 chr17 47076470 + Exonic hg19 THCA TCGA-EM-A2CM 2 Out-of-Frame Intra-chr q21.33 Transcription factor q21.32 Seq+ 15351 ChimerSeq FusionScan TCGA_RNA-Seq TRIM27-RET TRIM27 chr6 28887788 - RET chr10 43612031 + Exonic hg19 THCA TCGA-CE-A481 3 5'UTR-CDS Inter-chr q11.21 TK:Ret Oncogene KB Pub Seq+ 15352 ChimerSeq FusionScan TCGA_RNA-Seq NCOA4-RET NCOA4 chr10 51582939 + RET chr10 43612031 + Exonic hg19 THCA TCGA-CE-A482 5 In-Frame Intra-chr q11.22 Oncogene Tumor suppressor gene q11.21 TK:Ret Oncogene KB Pub Seq+ 15353 ChimerSeq FusionScan TCGA_RNA-Seq MKX-ANXA2 MKX chr10 28023384 - ANXA2 chr15 60656722 - Exonic hg19 THCA TCGA-CE-A482 2 In-Frame Inter-chr p12.1 Transcription factor q22.2 15354 ChimerSeq FusionScan TCGA_RNA-Seq ARID1B-TAX1BP1 ARID1B chr6 157100605 + TAX1BP1 chr7 27809294 + Exonic hg19 THCA TCGA-ET-A39P 2 In-Frame Inter-chr q25.3 Oncogene p15.2 15355 ChimerSeq FusionScan TCGA_RNA-Seq MET-TFG MET chr7 116412043 + TFG chr3 100455419 + Exonic hg19 THCA TCGA-FK-A3S3 16 In-Frame Inter-chr q31.2 TK:Met Oncogene q12.2 Seq+ 15356 ChimerSeq FusionScan TCGA_RNA-Seq TFG-MET TFG chr3 100451516 + MET chr7 116414934 + Exonic hg19 THCA TCGA-FK-A3S3 2 In-Frame Inter-chr q12.2 q31.2 TK:Met Oncogene KB Pub Seq+ 15357 ChimerSeq FusionScan TCGA_RNA-Seq LRIG2-GOLGA1 LRIG2 chr1 113662145 + GOLGA1 chr9 127701145 - Exonic hg19 THCA TCGA-DJ-A2PZ 2 CDS-5'UTR Inter-chr p13.2 q33.3 15358 ChimerSeq FusionScan TCGA_RNA-Seq ALOX15-PSMD2 ALOX15 chr17 4539053 - PSMD2 chr3 184021734 + Exonic hg19 THCA TCGA-DJ-A2PZ 2 In-Frame Inter-chr p13.2 Tumor suppressor gene q27.1 15359 ChimerSeq FusionScan TCGA_RNA-Seq EHMT1-ZMYND19 EHMT1 chr9 140513501 + ZMYND19 chr9 140483170 - Exonic hg19 THCA TCGA-EM-A2P3 2 In-Frame Intra-chr q34.3 q34.3 Seq+ 15360 ChimerSeq FusionScan TCGA_RNA-Seq E2F3-FARS2 E2F3 chr6 20404063 + FARS2 chr6 5404774 + Exonic hg19 THCA TCGA-DJ-A2PU 2 In-Frame Intra-chr p22.3 Tumor suppressor gene Transcription factor p25.1 15361 ChimerSeq FusionScan TCGA_RNA-Seq MACF1-BRAF MACF1 chr1 39896580 + BRAF chr7 140487384 - Exonic hg19 THCA TCGA-DE-A0Y2 8 In-Frame Inter-chr p34.3 q34 TKL:RAF Oncogene Seq+ 15362 ChimerSeq FusionScan TCGA_RNA-Seq GAS8-WDR59 GAS8 chr16 90089132 + WDR59 chr16 74976724 - Exonic hg19 THCA TCGA-BJ-A0ZB 2 Out-of-Frame Intra-chr q24.3 q23.1 Seq+ 15363 ChimerSeq FusionScan TCGA_RNA-Seq GPR155-HPCAL1 GPR155 chr2 175351600 - HPCAL1 chr2 10536960 + Exonic hg19 THCA TCGA-EM-A4FO 2 5'UTR-5'UTR Intra-chr q31.1 p25.1 15364 ChimerSeq FusionScan TCGA_RNA-Seq SDHAF2-NDUFA12 SDHAF2 chr11 61205585 + NDUFA12 chr12 95365396 - Exonic hg19 THCA TCGA-EL-A4KH 2 In-Frame Inter-chr q12.2 q22 15365 ChimerSeq FusionScan TCGA_RNA-Seq RAI1-UBB RAI1 chr17 17627473 + UBB chr17 16285215 + Exonic hg19 THCA TCGA-EL-A4KH 2 5'UTR-5'UTR Intra-chr p11.2 p11.2 15366 ChimerSeq FusionScan TCGA_RNA-Seq TATDN1-TAF2 TATDN1 chr8 125551265 - TAF2 chr8 120831746 - Exonic hg19 THCA TCGA-DJ-A2Q9 2 Out-of-Frame Intra-chr q24.13 q24.12 15367 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 THCA TCGA-DJ-A2Q9 2 Out-of-Frame Intra-chr q22.2 q22.2 15368 ChimerSeq FusionScan TCGA_RNA-Seq CASS4-AURKA CASS4 chr20 54987550 + AURKA chr20 54963258 - Exonic hg19 THCA TCGA-DJ-A2Q9 2 CDS-5'UTR Intra-chr q13.31 q13.2 Oncogene 15369 ChimerSeq FusionScan TCGA_RNA-Seq IRF2BP2-NTRK1 IRF2BP2 chr1 234744192 - NTRK1 chr1 156844362 + Exonic hg19 THCA TCGA-DJ-A4UP 2 In-Frame Intra-chr q42.3 q23.1 Oncogene Seq+ 15370 ChimerSeq FusionScan TCGA_RNA-Seq GPR64-TXLNG GPR64 chrX 19140559 - TXLNG chrX 16836696 + Exonic hg19 THCA TCGA-ET-A3BW 2 5'UTR-CDS Intra-chr p22.2 15371 ChimerSeq FusionScan TCGA_RNA-Seq C1orf54-COL6A2 C1orf54 chr1 150248208 + COL6A2 chr21 47542409 + Exonic hg19 THCA TCGA-DE-A2OL 2 In-Frame Inter-chr q21.2 q22.3 15372 ChimerSeq FusionScan TCGA_RNA-Seq TG-SLA TG chr8 133913798 + SLA chr8 134050982 - Exonic hg19 THCA TCGA-BJ-A192 5 Out-of-Frame Intra-chr q24.22 q24.22 Seq+ 15373 ChimerSeq FusionScan TCGA_RNA-Seq SSFA2-KHDRBS2 SSFA2 chr2 182787139 + KHDRBS2 chr6 62442669 - Exonic hg19 THCA TCGA-BJ-A0ZC 2 In-Frame Inter-chr q31.3 q11.1 15374 ChimerSeq FusionScan TCGA_RNA-Seq PAX8-NFE2L2 PAX8 chr2 113999127 - NFE2L2 chr2 178097311 - Exonic hg19 THCA TCGA-EM-A2CP 5 In-Frame Intra-chr q14.1 Oncogene Transcription factor q31.2 Oncogene Transcription factor KB Pub Seq+ 15375 ChimerSeq FusionScan TCGA_RNA-Seq DBP-PTTG1IP DBP chr19 49138836 - PTTG1IP chr21 46281186 - Exonic hg19 THCA TCGA-DJ-A3V5 2 Out-of-Frame Inter-chr q13.33 Transcription factor q22.3 15376 ChimerSeq FusionScan TCGA_RNA-Seq YWHAZ-SRI YWHAZ chr8 101964156 - SRI chr7 87840240 - Exonic hg19 THCA TCGA-ET-A3DO 2 5'UTR-CDS Inter-chr q22.3 q21.12 15377 ChimerSeq FusionScan TCGA_RNA-Seq DRAP1-RHBDD3 DRAP1 chr11 65687323 + RHBDD3 chr22 29656853 - Exonic hg19 THCA TCGA-BJ-A191 2 In-Frame Inter-chr q13.1 Transcription factor q12.2 15378 ChimerSeq FusionScan TCGA_RNA-Seq GLG1-FAF1 GLG1 chr16 74508443 - FAF1 chr1 50957473 - Exonic hg19 THCA TCGA-FE-A3PC 2 In-Frame Inter-chr q23.1 p32.3 15379 ChimerSeq FusionScan TCGA_RNA-Seq ENDOD1-UBE2Q2 ENDOD1 chr11 94823391 + UBE2Q2 chr15 76146726 + Exonic hg19 THCA TCGA-E3-A3E1 2 In-Frame Inter-chr q21 q24.2 15380 ChimerSeq FusionScan TCGA_RNA-Seq BRAF-AGK BRAF chr7 140500161 - AGK chr7 141292945 + Exonic hg19 THCA TCGA-DJ-A2PX 6 In-Frame Intra-chr q34 TKL:RAF Oncogene Seq+ 15381 ChimerSeq FusionScan TCGA_RNA-Seq TSHR-YAP1 TSHR chr14 81422194 + YAP1 chr11 102033186 + Exonic hg19 THCA TCGA-DJ-A2PX 2 In-Frame Inter-chr q31.1 Oncogene q22.1 Tumor suppressor gene 15382 ChimerSeq FusionScan TCGA_RNA-Seq TFG-NTRK1 TFG chr3 100455560 + NTRK1 chr1 156844362 + Exonic hg19 THCA TCGA-EM-A3AO 3 In-Frame Inter-chr q12.2 q23.1 Oncogene KB Pub Seq+ 15383 ChimerSeq FusionScan TCGA_RNA-Seq CLCN3-LIMCH1 CLCN3 chr4 170542214 + LIMCH1 chr4 41663436 + Exonic hg19 THCA TCGA-EM-A3AO 2 5'UTR-CDS Intra-chr q33 p13 15384 ChimerSeq FusionScan TCGA_RNA-Seq KAZN-PRDM2 KAZN chr1 15287371 + PRDM2 chr1 14142921 + Exonic hg19 THCA TCGA-EM-A4FU 2 In-Frame Intra-chr p36.21 p36.21 Tumor suppressor gene Transcription factor 15385 ChimerSeq FusionScan TCGA_RNA-Seq GAS8-WDR59 GAS8 chr16 90089132 + WDR59 chr16 74976724 - Exonic hg19 THCA TCGA-BJ-A0ZB 2 Out-of-Frame Intra-chr q24.3 q23.1 Seq+ 15386 ChimerSeq FusionScan TCGA_RNA-Seq PAX8-PPARG PAX8 chr2 113994177 - PPARG chr3 12421202 + Exonic hg19 THCA TCGA-EM-A3AJ 7 In-Frame Inter-chr q14.1 Oncogene Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 15387 ChimerSeq FusionScan TCGA_RNA-Seq PPARG-PAX8 PPARG chr3 12353952 + PAX8 chr2 113984833 - Exonic hg19 THCA TCGA-EM-A3AJ 2 5'UTR-CDS Inter-chr p25.2 Oncogene Tumor suppressor gene Transcription factor q14.1 Oncogene Transcription factor KB Seq+ 15388 ChimerSeq FusionScan TCGA_RNA-Seq PAX8-PPARG PAX8 chr2 113994177 - PPARG chr3 12421202 + Exonic hg19 THCA TCGA-BJ-A0YZ 6 In-Frame Inter-chr q14.1 Oncogene Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 15389 ChimerSeq FusionScan TCGA_RNA-Seq PPARG-PAX8 PPARG chr3 12353952 + PAX8 chr2 113984833 - Exonic hg19 THCA TCGA-BJ-A0YZ 3 5'UTR-CDS Inter-chr p25.2 Oncogene Tumor suppressor gene Transcription factor q14.1 Oncogene Transcription factor KB Seq+ 15390 ChimerSeq FusionScan TCGA_RNA-Seq CSDA-DERA CSDA chr12 10875448 - DERA chr12 16185475 + Exonic hg19 THCA TCGA-E8-A242 2 In-Frame Intra-chr p12.3 15391 ChimerSeq FusionScan TCGA_RNA-Seq EPS8-RALY EPS8 chr12 15942094 - RALY chr20 32619327 + Exonic hg19 THCA TCGA-EM-A3AQ 2 5'UTR-5'UTR Inter-chr p12.3 q11.22 15392 ChimerSeq FusionScan TCGA_RNA-Seq SNHG8-USP39 SNHG8 chr4 119200292 + USP39 chr2 85857843 + Exonic hg19 THCA TCGA-IM-A41Y 2 5'UTR-5'UTR Inter-chr q26 p11.2 15393 ChimerSeq FusionScan TCGA_RNA-Seq IPO7-ADAM10 IPO7 chr11 9424918 + ADAM10 chr15 58920082 - Exonic hg19 THCA TCGA-IM-A41Y 2 CDS-3'UTR Inter-chr p15.4 q21.3 15394 ChimerSeq FusionScan TCGA_RNA-Seq SCD5-TMEM150C SCD5 chr4 83601859 - TMEM150C chr4 83425820 - Exonic hg19 THCA TCGA-DJ-A3V4 2 CDS-5'UTR Intra-chr q21.22 q21.22 Seq+ 15395 ChimerSeq FusionScan TCGA_RNA-Seq FBXO34-TASP1 FBXO34 chr14 55738255 + TASP1 chr20 13398168 - Exonic hg19 THCA TCGA-DJ-A3V4 2 5'UTR-CDS Inter-chr q22.3 p12.1 15396 ChimerSeq FusionScan TCGA_RNA-Seq TRA2A-SMAD7 TRA2A chr7 23571407 - SMAD7 chr18 46448280 - Exonic hg19 THCA TCGA-DJ-A3V4 2 Out-of-Frame Inter-chr p15.3 q21.1 15397 ChimerSeq FusionScan TCGA_RNA-Seq ZNF287-PUM1 ZNF287 chr17 16466459 - PUM1 chr1 31479949 - Exonic hg19 THCA TCGA-DJ-A3V4 2 Out-of-Frame Inter-chr p11.2 Transcription factor p35.2 15398 ChimerSeq FusionScan TCGA_RNA-Seq RCBTB1-SLC3A2 RCBTB1 chr13 50123593 - SLC3A2 chr11 62650379 + Exonic hg19 THCA TCGA-EM-A1YA 2 In-Frame Inter-chr q14.2 q12.3 15399 ChimerSeq FusionScan TCGA_RNA-Seq KDM2A-NIPAL3 KDM2A chr11 66888829 + NIPAL3 chr1 24766661 + Exonic hg19 THCA TCGA-EM-A3SU 2 In-Frame Inter-chr q13.2 Transcription factor p36.11 15400 ChimerSeq FusionScan TCGA_RNA-Seq ADCK3-AHCYL1 ADCK3 chr1 227128100 + AHCYL1 chr1 110551655 + Exonic hg19 THCA TCGA-EM-A3SU 2 5'UTR-5'UTR Intra-chr Atypical:ABC1 p13.3 Tumor suppressor gene 15401 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-TBCA RCC1 chr1 28832596 + TBCA chr5 77004172 - Exonic hg19 THCA TCGA-DJ-A3UZ 2 5'UTR-CDS Inter-chr p35.3 q14.1 15402 ChimerSeq FusionScan TCGA_RNA-Seq BCKDHA-TMEM91 BCKDHA chr19 41925201 + TMEM91 chr19 41884185 + Exonic hg19 THCA TCGA-KS-A4I1 5 CDS-5'UTR Intra-chr q13.2 q13.2 Seq+ 15403 ChimerSeq FusionScan TCGA_RNA-Seq C3orf38-CENPV C3orf38 chr3 88202621 + CENPV chr17 16248025 - Exonic hg19 THCA TCGA-FE-A239 2 In-Frame Inter-chr p11.1 p11.2 15404 ChimerSeq FusionScan TCGA_RNA-Seq MKRN1-BRAF MKRN1 chr7 140158806 - BRAF chr7 140487384 - Exonic hg19 THCA TCGA-J8-A3O1 2 In-Frame Intra-chr q34 q34 TKL:RAF Oncogene KB Pub Seq+ 15405 ChimerSeq FusionScan TCGA_RNA-Seq ATP6V1A-ZNRF1 ATP6V1A chr3 113465960 + ZNRF1 chr16 75138681 + Exonic hg19 THCA TCGA-BJ-A2P4 2 5'UTR-CDS Inter-chr q13.31 q23.1 15406 ChimerSeq FusionScan TCGA_RNA-Seq FDPS-CHD9 FDPS chr1 155282186 + CHD9 chr16 53189837 + Exonic hg19 THCA TCGA-EL-A3H1 2 5'UTR-5'UTR Inter-chr q22 q12.2 15407 ChimerSeq FusionScan TCGA_RNA-Seq FKBP15-RET FKBP15 chr9 115932801 - RET chr10 43612031 + Exonic hg19 THCA TCGA-ET-A3DQ 2 In-Frame Inter-chr q32 q11.21 TK:Ret Oncogene Seq+ 15408 ChimerSeq FusionScan TCGA_RNA-Seq LPL-ASAH1 LPL chr8 19813594 + ASAH1 chr8 17915132 - Exonic hg19 THCA TCGA-H2-A2K9 2 Out-of-Frame Intra-chr p21.3 p22 15409 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 THCA TCGA-J8-A3YH 2 Out-of-Frame Intra-chr q22.2 q22.2 15410 ChimerSeq FusionScan TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12006495 + NTRK3 chr15 88576276 - Exonic hg19 THCA TCGA-E8-A438 2 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 15411 ChimerSeq FusionScan TCGA_RNA-Seq ARID1B-TAX1BP1 ARID1B chr6 157100605 + TAX1BP1 chr7 27809294 + Exonic hg19 THCA TCGA-ET-A39P 2 In-Frame Inter-chr q25.3 Oncogene p15.2 15412 ChimerSeq FusionScan TCGA_RNA-Seq RBPMS-NTRK3 RBPMS chr8 30361953 + NTRK3 chr15 88576276 - Exonic hg19 THCA TCGA-ET-A39L 4 In-Frame Inter-chr p12 q25.3 Oncogene Tumor suppressor gene Seq+ 15413 ChimerSeq FusionScan TCGA_RNA-Seq NTRK3-RBPMS NTRK3 chr15 88669501 - RBPMS chr8 30402010 + Exonic hg19 THCA TCGA-ET-A39L 2 In-Frame Inter-chr q25.3 Oncogene Tumor suppressor gene p12 Seq+ 15414 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-RET TBL1XR1 chr3 176765087 - RET chr10 43612031 + Exonic hg19 THCA TCGA-ET-A40R 3 In-Frame Inter-chr q26.32 q11.21 TK:Ret Oncogene Seq+ 15415 ChimerSeq FusionScan TCGA_RNA-Seq AKAP13-RET AKAP13 chr15 86284726 + RET chr10 43612031 + Exonic hg19 THCA TCGA-FK-A3SG 4 In-Frame Inter-chr q25.3 q11.21 TK:Ret Oncogene Seq+ 15416 ChimerSeq FusionScan TCGA_RNA-Seq AGRN-IRF3 AGRN chr1 970704 + IRF3 chr19 50163090 - Exonic hg19 THCA TCGA-FK-A3SG 2 In-Frame Inter-chr p36.33 q13.33 Tumor suppressor gene Transcription factor 15417 ChimerSeq FusionScan TCGA_RNA-Seq TADA2B-TBC1D14 TADA2B chr4 7045576 + TBC1D14 chr4 6925099 + Exonic hg19 THCA TCGA-DJ-A13X 2 CDS-5'UTR Intra-chr p16.1 p16.1 15418 ChimerSeq FusionScan TCGA_RNA-Seq VCL-FGFR2 VCL chr10 75758133 + FGFR2 chr10 123239535 - Exonic hg19 THCA TCGA-EM-A3FP 2 In-Frame Intra-chr q22.2 q26.13 TK:FGFR Oncogene Seq+ 15419 ChimerSeq FusionScan TCGA_RNA-Seq LYRM2-MUT LYRM2 chr6 90347443 - MUT chr6 49425771 - Exonic hg19 THCA TCGA-DJ-A1QF 2 3'UTR-CDS Intra-chr q15 p12.3 15420 ChimerSeq FusionScan TCGA_RNA-Seq EPB41L4A-HNRNPH3 EPB41L4A chr5 111754637 - HNRNPH3 chr10 70096955 + Exonic hg19 THCA TCGA-DJ-A1QF 2 CDS-5'UTR Inter-chr q22.2 q21.3 15421 ChimerSeq FusionScan TCGA_RNA-Seq RMST-MXI1 RMST chr12 97859505 + MXI1 chr10 111987946 + Exonic hg19 THCA TCGA-EL-A3CX 2 5'UTR-5'UTR Inter-chr q23.1 q25.2 Tumor suppressor gene Transcription factor 15422 ChimerSeq FusionScan TCGA_RNA-Seq UBXN7-DOK5 UBXN7 chr3 196159197 - DOK5 chr20 53259996 + Exonic hg19 THCA TCGA-EL-A3CX 2 Out-of-Frame Inter-chr q29 q13.2 15423 ChimerSeq FusionScan TCGA_RNA-Seq AGK-NDUFB2 AGK chr7 141255367 + NDUFB2 chr7 140402665 + Exonic hg19 THCA TCGA-ET-A2N3 2 In-Frame Intra-chr q34 Seq+ 15424 ChimerSeq FusionScan TCGA_RNA-Seq HS1BP3-CYP26C1 HS1BP3 chr2 20850791 - CYP26C1 chr10 94828076 + Exonic hg19 THCA TCGA-EM-A2P1 2 Out-of-Frame Inter-chr p24.1 q23.33 15425 ChimerSeq FusionScan TCGA_RNA-Seq FKBP15-RET FKBP15 chr9 115932801 - RET chr10 43612031 + Exonic hg19 THCA TCGA-ET-A3DQ 2 In-Frame Inter-chr q32 q11.21 TK:Ret Oncogene Seq+ 15426 ChimerSeq FusionScan TCGA_RNA-Seq GPR64-TXLNG GPR64 chrX 19140559 - TXLNG chrX 16836696 + Exonic hg19 THCA TCGA-ET-A3BW 2 5'UTR-CDS Intra-chr p22.2 15427 ChimerSeq FusionScan TCGA_RNA-Seq PPP6R3-CRKL PPP6R3 chr11 68228295 + CRKL chr22 21288066 + Exonic hg19 THCA TCGA-ET-A3BN 2 5'UTR-CDS Inter-chr q13.2 q11.21 Oncogene 15428 ChimerSeq FusionScan TCGA_RNA-Seq TMEM205-EPOR TMEM205 chr19 11455927 - EPOR chr19 11489454 - Exonic hg19 THCA TCGA-ET-A3BN 2 Out-of-Frame Intra-chr p13.2 p13.2 15429 ChimerSeq FusionScan TCGA_RNA-Seq BCAT2-AK1 BCAT2 chr19 49314240 - AK1 chr9 130630791 - Exonic hg19 THCA TCGA-IM-A3ED 2 In-Frame Inter-chr q13.33 q34.11 15430 ChimerSeq FusionScan TCGA_RNA-Seq HS1BP3-CYP26C1 HS1BP3 chr2 20850791 - CYP26C1 chr10 94828076 + Exonic hg19 THCA TCGA-EM-A2P1 2 Out-of-Frame Inter-chr p24.1 q23.33 15431 ChimerSeq FusionScan TCGA_RNA-Seq PAX8-GLIS1 PAX8 chr2 114035946 - GLIS1 chr1 54065951 - Exonic hg19 THCA TCGA-BJ-A291 4 CDS-5'UTR Inter-chr q14.1 Oncogene Transcription factor p32.3 Transcription factor Seq+ 15432 ChimerSeq FusionScan TCGA_RNA-Seq LRP8-PAX8 LRP8 chr1 53723990 - PAX8 chr2 114004496 - Exonic hg19 THCA TCGA-BJ-A291 3 In-Frame Inter-chr p32.3 q14.1 Oncogene Transcription factor Seq+ 15433 ChimerSeq FusionScan TCGA_RNA-Seq LRP8-PAX8 LRP8 chr1 53722911 - PAX8 chr2 114004496 - Exonic hg19 THCA TCGA-BJ-A291 2 In-Frame Inter-chr p32.3 q14.1 Oncogene Transcription factor Seq+ 15434 ChimerSeq FusionScan TCGA_RNA-Seq MATR3-PAIP2 MATR3 chr5 138629494 + PAIP2 chr5 138699447 + Exonic hg19 THCA TCGA-DJ-A2PP 2 5'UTR-5'UTR Intra-chr q31.2 q31.2 Tumor suppressor gene 15435 ChimerSeq FusionScan TCGA_RNA-Seq NCOR1-RHOU NCOR1 chr17 16097775 - RHOU chr1 228873419 + Exonic hg19 THCA TCGA-EM-A2OX 4 Out-of-Frame Inter-chr p11.2 Oncogene q42.13 Seq+ 15436 ChimerSeq FusionScan TCGA_RNA-Seq TBL1XR1-DNAJB11 TBL1XR1 chr3 176914908 - DNAJB11 chr3 186299159 + Exonic hg19 THCA TCGA-BJ-A2NA 2 5'UTR-CDS Intra-chr q26.32 q27.3 15437 ChimerSeq FusionScan TCGA_RNA-Seq EHMT1-ZMYND19 EHMT1 chr9 140513501 + ZMYND19 chr9 140483170 - Exonic hg19 THCA TCGA-EM-A2P3 2 In-Frame Intra-chr q34.3 q34.3 Seq+ 15438 ChimerSeq FusionScan TCGA_RNA-Seq RBM14-PACSIN2 RBM14 chr11 66384528 + PACSIN2 chr22 43308163 - Exonic hg19 THCA TCGA-DJ-A3UX 2 CDS-5'UTR Inter-chr q13.2 Tumor suppressor gene q13.2 15439 ChimerSeq FusionScan TCGA_RNA-Seq VCL-FGFR2 VCL chr10 75758133 + FGFR2 chr10 123239535 - Exonic hg19 THCA TCGA-EM-A3FP 2 In-Frame Intra-chr q22.2 q26.13 TK:FGFR Oncogene Seq+ 15440 ChimerSeq FusionScan TCGA_RNA-Seq PAX8-PPARG PAX8 chr2 113994177 - PPARG chr3 12421202 + Exonic hg19 THCA TCGA-BJ-A0ZF 6 In-Frame Inter-chr q14.1 Oncogene Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 15441 ChimerSeq FusionScan TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12006495 + NTRK3 chr15 88576276 - Exonic hg19 THCA TCGA-E8-A438 2 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 15442 ChimerSeq FusionScan TCGA_RNA-Seq PDE8B-MSANTD3 PDE8B chr5 76507089 + MSANTD3 chr9 103204187 + Exonic hg19 THCA TCGA-EL-A4KD 2 CDS-5'UTR Inter-chr q13.3 q31.1 Transcription factor 15443 ChimerSeq FusionScan TCGA_RNA-Seq PAX8-PPARG PAX8 chr2 113994177 - PPARG chr3 12421202 + Exonic hg19 THCA TCGA-BJ-A0YZ 6 In-Frame Inter-chr q14.1 Oncogene Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 15444 ChimerSeq FusionScan TCGA_RNA-Seq PPARG-PAX8 PPARG chr3 12353952 + PAX8 chr2 113984833 - Exonic hg19 THCA TCGA-BJ-A0YZ 3 5'UTR-CDS Inter-chr p25.2 Oncogene Tumor suppressor gene Transcription factor q14.1 Oncogene Transcription factor KB Seq+ 15445 ChimerSeq FusionScan TCGA_RNA-Seq ECH1-LGALS7B ECH1 chr19 39321717 - LGALS7B chr19 39280255 + Exonic hg19 THCA TCGA-DJ-A3VF 3 Out-of-Frame Intra-chr 15446 ChimerSeq FusionScan TCGA_RNA-Seq SRFBP1-SNX2 SRFBP1 chr5 121297763 + SNX2 chr5 122130960 + Exonic hg19 THCA TCGA-E8-A433 2 In-Frame Intra-chr q23.1 q23.2 15447 ChimerSeq FusionScan TCGA_RNA-Seq ISCA2-NPC2 ISCA2 chr14 74961093 + NPC2 chr14 74953139 - Exonic hg19 THCA TCGA-DJ-A4UL 2 Out-of-Frame Intra-chr q24.3 q24.3 15448 ChimerSeq FusionScan TCGA_RNA-Seq ZNF605-CHMP1A ZNF605 chr12 133509620 - CHMP1A chr16 89713739 - Exonic hg19 THCA TCGA-L6-A4EQ 2 In-Frame Inter-chr q24.33 Transcription factor q24.3 15449 ChimerSeq FusionScan TCGA_RNA-Seq IGDCC3-SNX1 IGDCC3 chr15 65667434 - SNX1 chr15 64404771 + Exonic hg19 THCA TCGA-EM-A1CV 2 Out-of-Frame Intra-chr q22.31 q22.31 15450 ChimerSeq FusionScan TCGA_RNA-Seq RAP1GDS1-SMARCA5 RAP1GDS1 chr4 99342545 + SMARCA5 chr4 144474271 + Exonic hg19 THCA TCGA-EL-A3ZN 2 In-Frame Intra-chr q23 q31.21 15451 ChimerSeq FusionScan TCGA_RNA-Seq VGLL4-C1orf21 VGLL4 chr3 11761867 - C1orf21 chr1 184446519 + Exonic hg19 THCA TCGA-DJ-A2PT 2 5'UTR-5'UTR Inter-chr p25.2 q25.3 15452 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-U2AF1 RCC1 chr1 28832596 + U2AF1 chr21 44515853 - Exonic hg19 THCA TCGA-L6-A4EP 3 5'UTR-5'UTR Inter-chr p35.3 q22.3 Oncogene 15453 ChimerSeq FusionScan TCGA_RNA-Seq PLXND1-EHMT1 PLXND1 chr3 129302409 - EHMT1 chr9 140728800 + Exonic hg19 THCA TCGA-L6-A4EP 2 In-Frame Inter-chr q22.1 q34.3 15454 ChimerSeq FusionScan TCGA_RNA-Seq ZNF605-CHMP1A ZNF605 chr12 133509620 - CHMP1A chr16 89713739 - Exonic hg19 THCA TCGA-L6-A4EQ 2 In-Frame Inter-chr q24.33 Transcription factor q24.3 15455 ChimerSeq FusionScan TCGA_RNA-Seq CDH1-ZNF565 CDH1 chr16 68772314 + ZNF565 chr19 36674635 - Exonic hg19 THCA TCGA-DJ-A1QD 2 In-Frame Inter-chr q22.1 Oncogene Tumor suppressor gene q13.12 Transcription factor 15456 ChimerSeq FusionScan TCGA_RNA-Seq ERRFI1-CACNA1E ERRFI1 chr1 8086217 - CACNA1E chr1 181546901 + Exonic hg19 THCA TCGA-4C-A93U 2 5'UTR-CDS Intra-chr p36.23 Tumor suppressor gene q25.3 Seq+ 15457 ChimerSeq FusionScan TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12006495 + NTRK3 chr15 88576276 - Exonic hg19 THCA TCGA-DJ-A4V0 2 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 15458 ChimerSeq FusionScan TCGA_RNA-Seq PAX8-PPARG PAX8 chr2 113994177 - PPARG chr3 12421202 + Exonic hg19 THCA TCGA-ET-A39N 6 In-Frame Inter-chr q14.1 Oncogene Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 15459 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-TBCA RCC1 chr1 28832596 + TBCA chr5 77004172 - Exonic hg19 THCA TCGA-DJ-A3UZ 2 5'UTR-CDS Inter-chr p35.3 q14.1 15460 ChimerSeq FusionScan TCGA_RNA-Seq RNF144B-DEK RNF144B chr6 18399930 + DEK chr6 18237747 - Exonic hg19 THCA TCGA-BJ-A28V 2 In-Frame Intra-chr p22.3 p22.3 Oncogene 15461 ChimerSeq FusionScan TCGA_RNA-Seq C9orf3-GMDS C9orf3 chr9 97767898 + GMDS chr6 1930464 - Exonic hg19 THCA TCGA-BJ-A28V 2 Out-of-Frame Inter-chr q22.32 p25.3 15462 ChimerSeq FusionScan TCGA_RNA-Seq C3orf26-TMEM45A C3orf26 chr3 99536887 + TMEM45A chr3 100295768 + Exonic hg19 THCA TCGA-EL-A3ZO 2 Out-of-Frame Intra-chr q12.2 15463 ChimerSeq FusionScan TCGA_RNA-Seq ERRFI1-CACNA1E ERRFI1 chr1 8086217 - CACNA1E chr1 181546901 + Exonic hg19 THCA TCGA-4C-A93U 2 5'UTR-CDS Intra-chr p36.23 Tumor suppressor gene q25.3 Seq+ 15464 ChimerSeq FusionScan TCGA_RNA-Seq IP6K1-ME1 IP6K1 chr3 49823786 - ME1 chr6 83963457 - Exonic hg19 THCA TCGA-DJ-A3V9 2 5'UTR-CDS Inter-chr p21.31 q14.2 15465 ChimerSeq FusionScan TCGA_RNA-Seq CCZ1-ASNS CCZ1 chr7 5940563 + ASNS chr7 97499125 - Exonic hg19 THCA TCGA-EM-A3O7 2 CDS-5'UTR Intra-chr p22.1 q21.3 15466 ChimerSeq FusionScan TCGA_RNA-Seq WDR86-ZNF444 WDR86 chr7 151092861 - ZNF444 chr19 56669862 + Exonic hg19 THCA TCGA-EL-A3D6 2 In-Frame Inter-chr q36.1 q13.43 Transcription factor 15467 ChimerSeq FusionScan TCGA_RNA-Seq ZC3H8-LINC00152 ZC3H8 chr2 113012484 - LINC00152 chr2 87820725 + Exonic hg19 THCA TCGA-ET-A2MX 2 CDS-5'UTR Intra-chr q14.1 Transcription factor 15468 ChimerSeq FusionScan TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665879 - RET chr10 43612031 + Exonic hg19 THCA TCGA-E3-A3E0 2 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 15469 ChimerSeq FusionScan TCGA_RNA-Seq SIDT2-CYP2C8 SIDT2 chr11 117064679 + CYP2C8 chr10 96827448 - Exonic hg19 THCA TCGA-EL-A3CP 2 In-Frame Inter-chr q23.3 q23.33 15470 ChimerSeq FusionScan TCGA_RNA-Seq LRPPRC-NDUFB2 LRPPRC chr2 44222937 - NDUFB2 chr7 140402665 + Exonic hg19 THCA TCGA-EM-A2CR 2 In-Frame Inter-chr p21 q34 15471 ChimerSeq FusionScan TCGA_RNA-Seq RAI1-EIF5A RAI1 chr17 17627473 + EIF5A chr17 7212933 + Exonic hg19 THCA TCGA-KS-A4I3 2 5'UTR-5'UTR Intra-chr p11.2 p13.1 15472 ChimerSeq FusionScan TCGA_RNA-Seq VPS8-EIF4G1 VPS8 chr3 184530013 + EIF4G1 chr3 184049053 + Exonic hg19 THCA TCGA-EL-A3H3 6 5'UTR-CDS Intra-chr q27.2 q27.1 Seq+ 15473 ChimerSeq FusionScan TCGA_RNA-Seq NCOA4-RET NCOA4 chr10 51582939 + RET chr10 43612031 + Exonic hg19 THCA TCGA-EL-A3H3 4 In-Frame Intra-chr q11.22 Oncogene Tumor suppressor gene q11.21 TK:Ret Oncogene KB Pub Seq+ 15474 ChimerSeq FusionScan TCGA_RNA-Seq RYBP-FHIT RYBP chr3 72495646 - FHIT chr3 59738047 - Exonic hg19 THYM TCGA-4V-A9QJ 7 Out-of-Frame Intra-chr p14.2 Tumor suppressor gene Seq+ 15475 ChimerSeq FusionScan TCGA_RNA-Seq EPSTI1-TSC22D1 EPSTI1 chr13 43566113 - TSC22D1 chr13 45010231 - Exonic hg19 THYM TCGA-4V-A9QJ 2 In-Frame Intra-chr q14.11 q14.11 Tumor suppressor gene Transcription factor Seq+ 15476 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 THYM TCGA-X7-A8DE 3 Out-of-Frame Intra-chr q22.2 q22.2 15477 ChimerSeq FusionScan TCGA_RNA-Seq TMEM167B-CLEC2B TMEM167B chr1 109633504 + CLEC2B chr12 10006007 - Exonic hg19 THYM TCGA-XU-AAXZ 2 Out-of-Frame Inter-chr p13.3 p13.31 15478 ChimerSeq FusionScan TCGA_RNA-Seq DNTT-FAM195B DNTT chr10 98064457 + FAM195B chr17 79782430 - Exonic hg19 THYM TCGA-X7-A8M6 2 CDS-5'UTR Inter-chr q24.1 15479 ChimerSeq FusionScan TCGA_RNA-Seq NFIA-CDK2AP1 NFIA chr1 61872399 + CDK2AP1 chr12 123751829 - Exonic hg19 THYM TCGA-XU-A92Z 6 In-Frame Inter-chr p31.3 Transcription factor q24.31 Tumor suppressor gene Seq+ 15480 ChimerSeq FusionScan TCGA_RNA-Seq SYT1-C6orf211 SYT1 chr12 79747399 + C6orf211 chr6 151775682 + Exonic hg19 THYM TCGA-XU-A92Z 2 Out-of-Frame Inter-chr q21.2 Seq+ 15481 ChimerSeq FusionScan TCGA_RNA-Seq RAI1-ATP5G1 RAI1 chr17 17627473 + ATP5G1 chr17 46970770 + Exonic hg19 THYM TCGA-ZB-A961 2 5'UTR-5'UTR Intra-chr p11.2 q21.32 Seq+ 15482 ChimerSeq FusionScan TCGA_RNA-Seq MED26-GADD45GIP1 MED26 chr19 16738682 - GADD45GIP1 chr19 13065340 - Exonic hg19 THYM TCGA-5U-AB0D 2 Out-of-Frame Intra-chr p13.11 p13.13 Tumor suppressor gene Seq+ 15483 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 THYM TCGA-XU-AAY1 2 Out-of-Frame Intra-chr q22.2 q22.2 15484 ChimerSeq FusionScan TCGA_RNA-Seq FAM83F-BAIAP2L2 FAM83F chr22 40391535 + BAIAP2L2 chr22 38494489 - Exonic hg19 THYM TCGA-5K-AAAP 2 In-Frame Intra-chr q13.1 q13.1 Seq+ 15485 ChimerSeq FusionScan TCGA_RNA-Seq SGTA-ASPSCR1 SGTA chr19 2783230 - ASPSCR1 chr17 79966912 + Exonic hg19 THYM TCGA-5K-AAAP 2 5'UTR-5'UTR Inter-chr p13.3 q25.3 15486 ChimerSeq FusionScan TCGA_RNA-Seq ITSN1-C21orf7 ITSN1 chr21 35015019 + C21orf7 chr21 30532261 + Exonic hg19 THYM TCGA-ZB-A969 9 5'UTR-CDS Intra-chr q22.11 Seq+ 15487 ChimerSeq FusionScan TCGA_RNA-Seq CHD6-SPEN CHD6 chr20 40246978 - SPEN chr1 16199310 + Exonic hg19 THYM TCGA-ZB-A969 2 5'UTR-CDS Inter-chr q12 p36.21 Transcription factor Seq+ 15488 ChimerSeq FusionScan TCGA_RNA-Seq MAGI1-MITF MAGI1 chr3 66023670 - MITF chr3 69998201 + Exonic hg19 THYM TCGA-ZB-A969 2 Out-of-Frame Intra-chr Oncogene p13 Oncogene Transcription factor Seq+ 15489 ChimerSeq FusionScan TCGA_RNA-Seq FAM193A-RGS12 FAM193A chr4 2641586 + RGS12 chr4 3415798 + Exonic hg19 THYM TCGA-ZB-A969 2 Out-of-Frame Intra-chr p16.3 p16.3 Seq+ 15490 ChimerSeq FusionScan TCGA_RNA-Seq FOXP1-FHIT FOXP1 chr3 71348970 - FHIT chr3 59908140 - Exonic hg19 THYM TCGA-ZB-A969 2 5'UTR-CDS Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor p14.2 Tumor suppressor gene Seq+ 15491 ChimerSeq FusionScan TCGA_RNA-Seq TTLL5-IFT43 TTLL5 chr14 76368567 + IFT43 chr14 76455227 + Exonic hg19 THYM TCGA-ZB-A965 2 Out-of-Frame Intra-chr q24.3 q24.3 Seq+ 15492 ChimerSeq FusionScan TCGA_RNA-Seq HCG18-TRIM26 HCG18 chr6 30294130 - TRIM26 chr6 30172542 - Exonic hg19 UCEC TCGA-D1-A177 2 5'UTR-5'UTR Intra-chr Seq+ 15493 ChimerSeq FusionScan TCGA_RNA-Seq JAGN1-VPS37C JAGN1 chr3 9932495 + VPS37C chr11 60906307 - Exonic hg19 UCEC TCGA-AX-A3FT 2 CDS-5'UTR Inter-chr p25.3 q12.2 15494 ChimerSeq FusionScan TCGA_RNA-Seq ZFP30-C19orf33 ZFP30 chr19 38134165 - C19orf33 chr19 38795014 + Exonic hg19 UCEC TCGA-AJ-A3BD 3 In-Frame Intra-chr q13.12 Transcription factor q13.2 Seq+ 15495 ChimerSeq FusionScan TCGA_RNA-Seq LRRFIP1-MLPH LRRFIP1 chr2 238536383 + MLPH chr2 238462208 + Exonic hg19 UCEC TCGA-AJ-A3BD 2 In-Frame Intra-chr q37.3 q37.3 Seq+ 15496 ChimerSeq FusionScan TCGA_RNA-Seq RCN3-FLT3LG RCN3 chr19 50042436 + FLT3LG chr19 49989271 + Exonic hg19 UCEC TCGA-AJ-A3BD 2 CDS-3'UTR Intra-chr q13.33 q13.33 Seq+ 15497 ChimerSeq FusionScan TCGA_RNA-Seq SUPT5H-ARHGEF19 SUPT5H chr19 39965358 + ARHGEF19 chr1 16525749 - Exonic hg19 UCEC TCGA-AJ-A3BD 2 Out-of-Frame Inter-chr q13.2 p36.13 Seq+ 15498 ChimerSeq FusionScan TCGA_RNA-Seq ATP2B4-GNAI3 ATP2B4 chr1 203596347 + GNAI3 chr1 110116358 + Exonic hg19 UCEC TCGA-EO-A22Y 2 5'UTR-CDS Intra-chr q32.1 p13.3 15499 ChimerSeq FusionScan TCGA_RNA-Seq GMEB2-PCDH7 GMEB2 chr20 62250619 - PCDH7 chr4 30732374 + Exonic hg19 UCEC TCGA-AP-A1DM 2 Out-of-Frame Inter-chr q13.33 Transcription factor p15.1 15500 ChimerSeq FusionScan TCGA_RNA-Seq NIPA2-CYFIP1 NIPA2 chr15 23012278 - CYFIP1 chr15 23002875 + Exonic hg19 UCEC TCGA-D1-A102 2 Out-of-Frame Intra-chr q11.2 q11.2 15501 ChimerSeq FusionScan TCGA_RNA-Seq PSMD3-CDK12 PSMD3 chr17 38151321 + CDK12 chr17 37657502 + Exonic hg19 UCEC TCGA-AP-A053 6 In-Frame Intra-chr q21.1 q12 Oncogene Seq+ 15502 ChimerSeq FusionScan TCGA_RNA-Seq MKL1-RGNEF MKL1 chr22 40948109 - RGNEF chr5 73236668 + Exonic hg19 UCEC TCGA-AP-A053 4 5'UTR-CDS Inter-chr q13.2 15503 ChimerSeq FusionScan TCGA_RNA-Seq NPLOC4-SIRT7 NPLOC4 chr17 79589191 - SIRT7 chr17 79872406 - Exonic hg19 UCEC TCGA-AP-A053 2 Out-of-Frame Intra-chr q25.3 q25.3 Seq+ 15504 ChimerSeq FusionScan TCGA_RNA-Seq AACS-MAL AACS chr12 125561157 + MAL chr2 95713703 + Exonic hg19 UCEC TCGA-AX-A1C7 6 Out-of-Frame Inter-chr q24.31 q11.1 Tumor suppressor gene Seq+ 15505 ChimerSeq FusionScan TCGA_RNA-Seq TNS3-PKD1L1 TNS3 chr7 47463698 - PKD1L1 chr7 47874841 - Exonic hg19 UCEC TCGA-AX-A062 4 Out-of-Frame Intra-chr p12.3 p12.3 Seq+ 15506 ChimerSeq FusionScan TCGA_RNA-Seq BMPR1B-WDR66 BMPR1B chr4 95679219 + WDR66 chr12 122404860 + Exonic hg19 UCEC TCGA-AX-A062 2 5'UTR-CDS Inter-chr q22.3 TKL:STKR q24.31 15507 ChimerSeq FusionScan TCGA_RNA-Seq SMARCC1-SPINK8 SMARCC1 chr3 47721926 - SPINK8 chr3 48351436 - Exonic hg19 UCEC TCGA-AX-A062 2 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 15508 ChimerSeq FusionScan TCGA_RNA-Seq PPP4R4-UNC79 PPP4R4 chr14 94642464 + UNC79 chr14 94155010 + Exonic hg19 UCEC TCGA-AX-A062 2 Out-of-Frame Intra-chr q32.12 Seq+ 15509 ChimerSeq FusionScan TCGA_RNA-Seq ERGIC3-MAP1LC3A ERGIC3 chr20 34136618 + MAP1LC3A chr20 33147011 + Exonic hg19 UCEC TCGA-E6-A8L9 10 In-Frame Intra-chr q11.22 q11.22 Seq+ 15510 ChimerSeq FusionScan TCGA_RNA-Seq LDLR-MRPL4 LDLR chr19 11218190 + MRPL4 chr19 10368897 + Exonic hg19 UCEC TCGA-E6-A8L9 9 In-Frame Intra-chr p13.2 p13.2 Seq+ 15511 ChimerSeq FusionScan TCGA_RNA-Seq SBF1-SYCE3 SBF1 chr22 50892940 - SYCE3 chr22 50994834 - Exonic hg19 UCEC TCGA-E6-A8L9 6 CDS-5'UTR Intra-chr q13.33 q13.33 Seq+ 15512 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R37-ALOX15B PPP1R37 chr19 45596785 + ALOX15B chr17 7945686 + Exonic hg19 UCEC TCGA-E6-A8L9 5 Out-of-Frame Inter-chr q13.32 p13.1 Tumor suppressor gene Seq+ 15513 ChimerSeq FusionScan TCGA_RNA-Seq GON4L-CCT3 GON4L chr1 155726748 - CCT3 chr1 156279094 - Exonic hg19 UCEC TCGA-E6-A8L9 4 In-Frame Intra-chr q22 q22 Seq+ 15514 ChimerSeq FusionScan TCGA_RNA-Seq SEPT9-MGAT5B SEPT9 chr17 75369634 + MGAT5B chr17 74934069 + Exonic hg19 UCEC TCGA-E6-A8L9 4 Out-of-Frame Intra-chr q25.2 Seq+ 15515 ChimerSeq FusionScan TCGA_RNA-Seq ADAR-UBE2J2 ADAR chr1 154580467 - UBE2J2 chr1 1203372 - Exonic hg19 UCEC TCGA-E6-A8L9 3 CDS-5'UTR Intra-chr q21.3 p36.33 Seq+ 15516 ChimerSeq FusionScan TCGA_RNA-Seq LRRC8A-MEN1 LRRC8A chr9 131644529 + MEN1 chr11 64578377 - Exonic hg19 UCEC TCGA-E6-A8L9 3 5'UTR-5'UTR Inter-chr q34.11 q13.1 Oncogene Tumor suppressor gene Seq+ 15517 ChimerSeq FusionScan TCGA_RNA-Seq TMEM48-SSBP3 TMEM48 chr1 54252830 - SSBP3 chr1 54747200 - Exonic hg19 UCEC TCGA-E6-A8L9 3 In-Frame Intra-chr p32.3 Seq+ 15518 ChimerSeq FusionScan TCGA_RNA-Seq ADAR-UBE2J2 ADAR chr1 154580467 - UBE2J2 chr1 1198766 - Exonic hg19 UCEC TCGA-E6-A8L9 2 Out-of-Frame Intra-chr q21.3 p36.33 Seq+ 15519 ChimerSeq FusionScan TCGA_RNA-Seq MICALL1-SHC1 MICALL1 chr22 38302575 + SHC1 chr1 154938993 - Exonic hg19 UCEC TCGA-PG-A914 6 In-Frame Inter-chr q13.1 q21.3 Seq+ 15520 ChimerSeq FusionScan TCGA_RNA-Seq IP6K2-PRKAR2A IP6K2 chr3 48754589 - PRKAR2A chr3 48793877 - Exonic hg19 UCEC TCGA-PG-A914 4 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 15521 ChimerSeq FusionScan TCGA_RNA-Seq SIPA1L3-RAB8A SIPA1L3 chr19 38397998 + RAB8A chr19 16236279 + Exonic hg19 UCEC TCGA-PG-A914 3 5'UTR-CDS Intra-chr q13.13 p13.11 Seq+ 15522 ChimerSeq FusionScan TCGA_RNA-Seq REV3L-FYN REV3L chr6 111803952 - FYN chr6 112041265 - Exonic hg19 UCEC TCGA-PG-A914 3 CDS-5'UTR Intra-chr q21 q21 TK:Src Seq+ 15523 ChimerSeq FusionScan TCGA_RNA-Seq ZNF587-AURKC ZNF587 chr19 58361439 + AURKC chr19 57743109 + Exonic hg19 UCEC TCGA-PG-A914 2 Out-of-Frame Intra-chr q13.43 Transcription factor q13.43 Oncogene Seq+ 15524 ChimerSeq FusionScan TCGA_RNA-Seq NOSIP-HYDIN NOSIP chr19 50083771 - HYDIN chr16 70955120 - Exonic hg19 UCEC TCGA-PG-A914 2 5'UTR-CDS Inter-chr q13.33 15525 ChimerSeq FusionScan TCGA_RNA-Seq SMURF2-GNA13 SMURF2 chr17 62657946 - GNA13 chr17 63014421 - Exonic hg19 UCEC TCGA-PG-A914 2 Out-of-Frame Intra-chr q24.1 q24.1 Seq+ 15526 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD33B-MAML1 ANKRD33B chr5 10564945 + MAML1 chr5 179192326 + Exonic hg19 UCEC TCGA-PG-A914 2 In-Frame Intra-chr p15.2 Seq+ 15527 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPA2B1-SKAP2 HNRNPA2B1 chr7 26232114 - SKAP2 chr7 26894509 - Exonic hg19 UCEC TCGA-PG-A914 2 3'UTR-CDS Intra-chr p15.2 p15.2 Seq+ 15528 ChimerSeq FusionScan TCGA_RNA-Seq MYO1E-TMCO3 MYO1E chr15 59664696 - TMCO3 chr13 114174930 + Exonic hg19 UCEC TCGA-PG-A914 2 Out-of-Frame Inter-chr q22.2 q34 Seq+ 15529 ChimerSeq FusionScan TCGA_RNA-Seq PICK1-MYPOP PICK1 chr22 38455352 + MYPOP chr19 46394581 - Exonic hg19 UCEC TCGA-PG-A914 2 Out-of-Frame Inter-chr q13.1 q13.32 Transcription factor Seq+ 15530 ChimerSeq FusionScan TCGA_RNA-Seq CC2D1A-RLN3 CC2D1A chr19 14024451 + RLN3 chr19 14141521 + Exonic hg19 UCEC TCGA-B5-A1MS 5 In-Frame Intra-chr p13.12 Transcription factor p13.12 Seq+ 15531 ChimerSeq FusionScan TCGA_RNA-Seq CC2D1A-C19orf57 CC2D1A chr19 14017314 + C19orf57 chr19 13996868 - Exonic hg19 UCEC TCGA-B5-A1MS 4 In-Frame Intra-chr p13.12 Transcription factor p13.12 Seq+ 15532 ChimerSeq FusionScan TCGA_RNA-Seq NAPG-RAB31 NAPG chr18 10526155 + RAB31 chr18 9859224 + Exonic hg19 UCEC TCGA-DF-A2KY 2 Out-of-Frame Intra-chr p11.22 p11.22 15533 ChimerSeq FusionScan TCGA_RNA-Seq IRAK1-GRINA IRAK1 chrX 153284647 - GRINA chr8 145066412 + Exonic hg19 UCEC TCGA-DF-A2KY 2 Out-of-Frame Inter-chr q28 TKL:IRAK q24.3 15534 ChimerSeq FusionScan TCGA_RNA-Seq CSDA-PRR4 CSDA chr12 10875448 - PRR4 chr12 11001006 - Exonic hg19 UCEC TCGA-DF-A2KY 2 In-Frame Intra-chr 15535 ChimerSeq FusionScan TCGA_RNA-Seq KLHL2-HIAT1 KLHL2 chr4 166184511 + HIAT1 chr1 100515464 + Exonic hg19 UCEC TCGA-AX-A0IW 2 Out-of-Frame Inter-chr q32.3 15536 ChimerSeq FusionScan TCGA_RNA-Seq C5orf44-ERBB2IP C5orf44 chr5 64920933 + ERBB2IP chr5 65370851 + Exonic hg19 UCEC TCGA-A5-A0G2 2 Out-of-Frame Intra-chr 15537 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1958-UBE2R2 KIAA1958 chr9 115249398 + UBE2R2 chr9 33911961 + Exonic hg19 UCEC TCGA-EY-A212 4 5'UTR-CDS Intra-chr q32 p13.3 Seq+ 15538 ChimerSeq FusionScan TCGA_RNA-Seq GALM-STIP1 GALM chr2 38903208 + STIP1 chr11 63967411 + Exonic hg19 UCEC TCGA-EY-A212 3 In-Frame Inter-chr p22.1 q13.1 Seq+ 15539 ChimerSeq FusionScan TCGA_RNA-Seq CALM3-BAD CALM3 chr19 47104694 + BAD chr11 64039275 - Exonic hg19 UCEC TCGA-EY-A212 2 Out-of-Frame Inter-chr q13.32 q13.1 Seq+ 15540 ChimerSeq FusionScan TCGA_RNA-Seq STAU2-FAM132A STAU2 chr8 74659017 - FAM132A chr1 1179877 - Exonic hg19 UCEC TCGA-AJ-A3EL 2 5'UTR-CDS Inter-chr q21.11 15541 ChimerSeq FusionScan TCGA_RNA-Seq DNM2-ILF3 DNM2 chr19 10887892 + ILF3 chr19 10789288 + Exonic hg19 UCEC TCGA-E6-A1LZ 2 In-Frame Intra-chr p13.2 p13.2 Seq+ 15542 ChimerSeq FusionScan TCGA_RNA-Seq IP6K2-CNDP2 IP6K2 chr3 48732522 - CNDP2 chr18 72186183 + Exonic hg19 UCEC TCGA-AJ-A3OJ 2 In-Frame Inter-chr p21.31 q22.3 Tumor suppressor gene 15543 ChimerSeq FusionScan TCGA_RNA-Seq MECOM-SLC7A14 MECOM chr3 169381123 - SLC7A14 chr3 170219134 - Exonic hg19 UCEC TCGA-A5-A7WK 5 In-Frame Intra-chr q26.2 Transcription factor q26.2 Seq+ 15544 ChimerSeq FusionScan TCGA_RNA-Seq FAM174B-PHF20 FAM174B chr15 93198545 - PHF20 chr20 34430494 + Exonic hg19 UCEC TCGA-A5-A7WK 3 In-Frame Inter-chr q26.1 q11.22 Transcription factor Seq+ 15545 ChimerSeq FusionScan TCGA_RNA-Seq WDR82-UBE4B WDR82 chr3 52304727 - UBE4B chr1 10132085 + Exonic hg19 UCEC TCGA-A5-A7WK 3 Out-of-Frame Inter-chr p21.2 p36.22 Tumor suppressor gene Seq+ 15546 ChimerSeq FusionScan TCGA_RNA-Seq DLGAP4-RGMA DLGAP4 chr20 35089913 + RGMA chr15 93595737 - Exonic hg19 UCEC TCGA-A5-A7WK 3 5'UTR-CDS Inter-chr q11.23 q26.1 Seq+ 15547 ChimerSeq FusionScan TCGA_RNA-Seq NTN1-RANGAP1 NTN1 chr17 8926708 + RANGAP1 chr22 41664160 - Exonic hg19 UCEC TCGA-A5-A7WK 3 Out-of-Frame Inter-chr p13.1 q13.2 Seq+ 15548 ChimerSeq FusionScan TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104654982 + LHFPL3 chr7 104546633 + Exonic hg19 UCEC TCGA-A5-A7WK 3 5'UTR-CDS Intra-chr q22.2 Seq+ 15549 ChimerSeq FusionScan TCGA_RNA-Seq LGR6-GPR37L1 LGR6 chr1 202163329 + GPR37L1 chr1 202096868 + Exonic hg19 UCEC TCGA-A5-A7WK 2 Out-of-Frame Intra-chr q32.1 q32.1 Seq+ 15550 ChimerSeq FusionScan TCGA_RNA-Seq DLGAP4-RGMA DLGAP4 chr20 35091002 + RGMA chr15 93595737 - Exonic hg19 UCEC TCGA-A5-A7WK 2 In-Frame Inter-chr q11.23 q26.1 Seq+ 15551 ChimerSeq FusionScan TCGA_RNA-Seq STXBP1-CACNA2D2 STXBP1 chr9 130425632 + CACNA2D2 chr3 50418557 - Exonic hg19 UCEC TCGA-A5-A7WK 2 Out-of-Frame Inter-chr q34.11 p21.31 Seq+ 15552 ChimerSeq FusionScan TCGA_RNA-Seq PIP5K1B-PGM5 PIP5K1B chr9 71437599 + PGM5 chr9 71080008 + Exonic hg19 UCEC TCGA-A5-A7WK 2 Out-of-Frame Intra-chr q21.11 q21.11 Seq+ 15553 ChimerSeq FusionScan TCGA_RNA-Seq RIC3-ZNF143 RIC3 chr11 8158924 - ZNF143 chr11 9530165 + Exonic hg19 UCEC TCGA-D1-A1NY 2 Out-of-Frame Intra-chr p15.4 p15.4 Transcription factor 15554 ChimerSeq FusionScan TCGA_RNA-Seq PCCA-TMTC4 PCCA chr13 101101559 + TMTC4 chr13 101266684 - Exonic hg19 UCEC TCGA-AX-A2HG 2 In-Frame Intra-chr q32.3 q32.3 15555 ChimerSeq FusionScan TCGA_RNA-Seq ITGAV-C19orf43 ITGAV chr2 187519435 + C19orf43 chr19 12841882 - Exonic hg19 UCEC TCGA-AP-A0LF 2 Out-of-Frame Inter-chr q32.1 Tumor suppressor gene p13.13 Seq+ 15556 ChimerSeq FusionScan TCGA_RNA-Seq PEX11A-MESP1 PEX11A chr15 90233807 - MESP1 chr15 90293458 - Exonic hg19 UCEC TCGA-EO-A1Y7 3 Out-of-Frame Intra-chr q26.1 q26.1 Transcription factor Seq+ 15557 ChimerSeq FusionScan TCGA_RNA-Seq CTNNA1-C20orf72 CTNNA1 chr5 138163407 + C20orf72 chr20 17968808 + Exonic hg19 UCEC TCGA-AP-A0LI 2 Out-of-Frame Inter-chr q31.2 Oncogene 15558 ChimerSeq FusionScan TCGA_RNA-Seq TLK2-METTL2B TLK2 chr17 60613698 + METTL2B chr7 128140956 + Exonic hg19 UCEC TCGA-BG-A0MK 2 Out-of-Frame Inter-chr q23.2 Other:TLK q32.1 15559 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0020-PHF14 KIAA0020 chr9 2828674 - PHF14 chr7 11150976 + Exonic hg19 UCEC TCGA-BG-A0MK 2 CDS-5'UTR Inter-chr p21.3 15560 ChimerSeq FusionScan TCGA_RNA-Seq PAMR1-SH3BGR PAMR1 chr11 35513592 - SH3BGR chr21 40883606 + Exonic hg19 UCEC TCGA-BG-A0MK 2 Out-of-Frame Inter-chr p13 q22.2 15561 ChimerSeq FusionScan TCGA_RNA-Seq STX19-UBE2D2 STX19 chr3 93747210 - UBE2D2 chr5 138979956 + Exonic hg19 UCEC TCGA-BG-A0MK 2 5'UTR-5'UTR Inter-chr q11.2 q31.2 15562 ChimerSeq FusionScan TCGA_RNA-Seq ITGB5-UMPS ITGB5 chr3 124515234 - UMPS chr3 124456414 + Exonic hg19 UCEC TCGA-B5-A5OC 2 In-Frame Intra-chr q21.2 q21.2 15563 ChimerSeq FusionScan TCGA_RNA-Seq CTNNB1-FGF12 CTNNB1 chr3 41241161 + FGF12 chr3 192078327 - Exonic hg19 UCEC TCGA-AJ-A2QK 3 5'UTR-CDS Intra-chr p22.1 Oncogene q29 Seq+ 15564 ChimerSeq FusionScan TCGA_RNA-Seq ERICH1-ASMTL ERICH1 chr8 681139 - ASMTL chrX 1531747 - Exonic hg19 UCEC TCGA-AX-A1CE 3 Out-of-Frame Inter-chr p22.33 15565 ChimerSeq FusionScan TCGA_RNA-Seq SLC7A1-RSPH9 SLC7A1 chr13 30169552 - RSPH9 chr6 43623298 + Exonic hg19 UCEC TCGA-D1-A1NU 11 5'UTR-CDS Inter-chr q12.3 p21.1 Seq+ 15566 ChimerSeq FusionScan TCGA_RNA-Seq TMEM123-MMP27 TMEM123 chr11 102319542 - MMP27 chr11 102567222 - Exonic hg19 UCEC TCGA-D1-A1NU 9 In-Frame Intra-chr q22.2 q22.2 Seq+ 15567 ChimerSeq FusionScan TCGA_RNA-Seq TMEM123-MMP20 TMEM123 chr11 102319542 - MMP20 chr11 102449873 - Exonic hg19 UCEC TCGA-D1-A1NU 4 Out-of-Frame Intra-chr q22.2 q22.2 Seq+ 15568 ChimerSeq FusionScan TCGA_RNA-Seq METTL24-SLC22A16 METTL24 chr6 110636544 - SLC22A16 chr6 110778220 - Exonic hg19 UCEC TCGA-D1-A1NU 4 In-Frame Intra-chr q21 q21 Seq+ 15569 ChimerSeq FusionScan TCGA_RNA-Seq CHD2-PDXK CHD2 chr15 93480855 + PDXK chr21 45153949 + Exonic hg19 UCEC TCGA-D1-A1NU 3 Out-of-Frame Inter-chr q26.1 q22.3 Seq+ 15570 ChimerSeq FusionScan TCGA_RNA-Seq TMEM123-MMP27 TMEM123 chr11 102319542 - MMP27 chr11 102567566 - Exonic hg19 UCEC TCGA-D1-A1NU 2 In-Frame Intra-chr q22.2 q22.2 Seq+ 15571 ChimerSeq FusionScan TCGA_RNA-Seq STX18-LYAR STX18 chr4 4440120 - LYAR chr4 4285522 - Exonic hg19 UCEC TCGA-D1-A16O 3 CDS-5'UTR Intra-chr p16.2 p16.3 Seq+ 15572 ChimerSeq FusionScan TCGA_RNA-Seq RARA-CDK12 RARA chr17 38504716 + CDK12 chr17 37686856 + Exonic hg19 UCEC TCGA-D1-A16O 2 Out-of-Frame Intra-chr q21.2 Oncogene Transcription factor q12 Oncogene Seq+ 15573 ChimerSeq FusionScan TCGA_RNA-Seq RPS6KC1-FLVCR1 RPS6KC1 chr1 213224851 + FLVCR1 chr1 213068327 + Exonic hg19 UCEC TCGA-D1-A16O 2 Out-of-Frame Intra-chr q32.3 q32.3 15574 ChimerSeq FusionScan TCGA_RNA-Seq KIAA0232-MAN2B2 KIAA0232 chr4 6878484 + MAN2B2 chr4 6610833 + Exonic hg19 UCEC TCGA-D1-A16O 2 Out-of-Frame Intra-chr p16.1 p16.1 Seq+ 15575 ChimerSeq FusionScan TCGA_RNA-Seq URI1-FOXA3 URI1 chr19 30477324 + FOXA3 chr19 46375332 + Exonic hg19 UCEC TCGA-PG-A915 7 Out-of-Frame Intra-chr q12 q13.32 Transcription factor Seq+ 15576 ChimerSeq FusionScan TCGA_RNA-Seq DDTL-SEC13 DDTL chr22 24309749 + SEC13 chr3 10343058 - Exonic hg19 UCEC TCGA-PG-A915 6 Out-of-Frame Inter-chr p25.3 Seq+ 15577 ChimerSeq FusionScan TCGA_RNA-Seq GHRL-SEC13 GHRL chr3 10328387 - SEC13 chr3 10343058 - Exonic hg19 UCEC TCGA-PG-A915 5 Out-of-Frame Intra-chr p25.3 p25.3 Seq+ 15578 ChimerSeq FusionScan TCGA_RNA-Seq CDON-NF2 CDON chr11 125848198 - NF2 chr22 30090740 + Exonic hg19 UCEC TCGA-PG-A915 5 Out-of-Frame Inter-chr q24.2 q12.2 Oncogene Tumor suppressor gene Seq+ 15579 ChimerSeq FusionScan TCGA_RNA-Seq ZNF709-ELL ZNF709 chr19 12595468 - ELL chr19 18557624 - Exonic hg19 UCEC TCGA-PG-A915 2 Out-of-Frame Intra-chr p13.2 Transcription factor p13.11 Seq+ 15580 ChimerSeq FusionScan TCGA_RNA-Seq DDI2-EFHD2 DDI2 chr1 15953293 + EFHD2 chr1 15752366 + Exonic hg19 UCEC TCGA-AP-A0L9 3 Out-of-Frame Intra-chr p36.21 p36.21 15581 ChimerSeq FusionScan TCGA_RNA-Seq NUP205-ASH1L NUP205 chr7 135242720 + ASH1L chr1 155324421 - Exonic hg19 UCEC TCGA-AP-A0L9 2 Out-of-Frame Inter-chr q33 q22 Transcription factor 15582 ChimerSeq FusionScan TCGA_RNA-Seq NR1H3-DDB2 NR1H3 chr11 47270550 + DDB2 chr11 47259387 + Exonic hg19 UCEC TCGA-AP-A0L9 2 5'UTR-CDS Intra-chr p11.2 Transcription factor p11.2 Oncogene Tumor suppressor gene 15583 ChimerSeq FusionScan TCGA_RNA-Seq FNDC3B-PIK3CA FNDC3B chr3 171851336 + PIK3CA chr3 178916537 + Exonic hg19 UCEC TCGA-BK-A56F 4 CDS-5'UTR Intra-chr q26.31 q26.32 Oncogene Seq+ 15584 ChimerSeq FusionScan TCGA_RNA-Seq SMARCC1-MAP4 SMARCC1 chr3 47702783 - MAP4 chr3 47919013 - Exonic hg19 UCEC TCGA-FI-A3PX 3 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 15585 ChimerSeq FusionScan TCGA_RNA-Seq PUM1-NKAIN1 PUM1 chr1 31422973 - NKAIN1 chr1 31661034 - Exonic hg19 UCEC TCGA-FI-A3PX 3 In-Frame Intra-chr p35.2 p35.2 Seq+ 15586 ChimerSeq FusionScan TCGA_RNA-Seq PUM1-NKAIN1 PUM1 chr1 31422979 - NKAIN1 chr1 31661034 - Exonic hg19 UCEC TCGA-FI-A3PX 3 In-Frame Intra-chr p35.2 p35.2 Seq+ 15587 ChimerSeq FusionScan TCGA_RNA-Seq CCAR1-HNRNPH3 CCAR1 chr10 70509442 + HNRNPH3 chr10 70096955 + Exonic hg19 UCEC TCGA-FI-A3PX 2 CDS-5'UTR Intra-chr q21.3 Tumor suppressor gene q21.3 Seq+ 15588 ChimerSeq FusionScan TCGA_RNA-Seq RIT1-TARS2 RIT1 chr1 155874101 - TARS2 chr1 150476810 + Exonic hg19 UCEC TCGA-FI-A3PX 2 In-Frame Intra-chr q22 q21.2 Seq+ 15589 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-ZNF507 CPSF6 chr12 69656342 + ZNF507 chr19 32873372 + Exonic hg19 UCEC TCGA-FI-A3PX 2 3'UTR-CDS Inter-chr q15 q13.11 Transcription factor 15590 ChimerSeq FusionScan TCGA_RNA-Seq VAPB-GNAI3 VAPB chr20 56964573 + GNAI3 chr1 110116358 + Exonic hg19 UCEC TCGA-KP-A3VZ 8 In-Frame Inter-chr q13.32 p13.3 15591 ChimerSeq FusionScan TCGA_RNA-Seq YAP1-BIRC2 YAP1 chr11 101985125 + BIRC2 chr11 102233626 + Exonic hg19 UCEC TCGA-KP-A3VZ 6 CDS-5'UTR Intra-chr q22.1 Tumor suppressor gene q22.2 Oncogene Seq+ 15592 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPL-SEPW1 HNRNPL chr19 39334481 - SEPW1 chr19 48283981 + Exonic hg19 UCEC TCGA-KP-A3VZ 5 Out-of-Frame Intra-chr Seq+ 15593 ChimerSeq FusionScan TCGA_RNA-Seq FIGN-STK25 FIGN chr2 164591412 - STK25 chr2 242441123 - Exonic hg19 UCEC TCGA-KP-A3VZ 4 Out-of-Frame Intra-chr q24.3 q37.3 Seq+ 15594 ChimerSeq FusionScan TCGA_RNA-Seq SMARCC1-MAP4 SMARCC1 chr3 47814306 - MAP4 chr3 47899002 - Exonic hg19 UCEC TCGA-KP-A3VZ 3 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 15595 ChimerSeq FusionScan TCGA_RNA-Seq RNF180-CWC27 RNF180 chr5 63626233 + CWC27 chr5 64267529 + Exonic hg19 UCEC TCGA-KP-A3VZ 2 In-Frame Intra-chr q12.3 Tumor suppressor gene q12.3 Seq+ 15596 ChimerSeq FusionScan TCGA_RNA-Seq FAM60A-MTX2 FAM60A chr12 31478957 - MTX2 chr2 177161587 + Exonic hg19 UCEC TCGA-KP-A3VZ 2 5'UTR-5'UTR Inter-chr q31.1 15597 ChimerSeq FusionScan TCGA_RNA-Seq CDC37-PDE4A CDC37 chr19 10514053 - PDE4A chr19 10574468 + Exonic hg19 UCEC TCGA-KP-A3VZ 2 In-Frame Intra-chr p13.2 p13.2 Seq+ 15598 ChimerSeq FusionScan TCGA_RNA-Seq STK24-PDE1A STK24 chr13 99228998 - PDE1A chr2 183387113 - Exonic hg19 UCEC TCGA-KP-A3VZ 2 Out-of-Frame Inter-chr q32.2 q32.1 Seq+ 15599 ChimerSeq FusionScan TCGA_RNA-Seq PAX8-IL36B PAX8 chr2 114035946 - IL36B chr2 113788732 - Exonic hg19 UCEC TCGA-KP-A3VZ 2 In-Frame Intra-chr q14.1 Oncogene Transcription factor q14.1 Seq+ 15600 ChimerSeq FusionScan TCGA_RNA-Seq MYO9A-PARP6 MYO9A chr15 72410020 - PARP6 chr15 72535040 - Exonic hg19 UCEC TCGA-AX-A3G4 4 5'UTR-CDS Intra-chr q23 q23 Seq+ 15601 ChimerSeq FusionScan TCGA_RNA-Seq CTDSPL2-FBXO42 CTDSPL2 chr15 44719970 + FBXO42 chr1 16621412 - Exonic hg19 UCEC TCGA-AX-A3G4 3 5'UTR-CDS Inter-chr q15.3 p36.13 Seq+ 15602 ChimerSeq FusionScan TCGA_RNA-Seq ZFX-EIF2S3 ZFX chrX 24167911 + EIF2S3 chrX 24089674 + Exonic hg19 UCEC TCGA-AX-A3G4 2 5'UTR-CDS Intra-chr p22.11 Transcription factor p22.11 Seq+ 15603 ChimerSeq FusionScan TCGA_RNA-Seq RPS19-FXYD5 RPS19 chr19 42365281 + FXYD5 chr19 35660468 + Exonic hg19 UCEC TCGA-H5-A2HR 2 In-Frame Intra-chr q13.2 q13.12 15604 ChimerSeq FusionScan TCGA_RNA-Seq PPP1CB-PI4KB PPP1CB chr2 28975042 + PI4KB chr1 151280277 - Exonic hg19 UCEC TCGA-AX-A3G3 2 Out-of-Frame Inter-chr p23.2 q21.3 Seq+ 15605 ChimerSeq FusionScan TCGA_RNA-Seq MED25-TBC1D17 MED25 chr19 50339663 + TBC1D17 chr19 50390974 + Exonic hg19 UCEC TCGA-AX-A3G3 2 Out-of-Frame Intra-chr q13.33 q13.33 Seq+ 15606 ChimerSeq FusionScan TCGA_RNA-Seq FBXO42-LAPTM5 FBXO42 chr1 16678749 - LAPTM5 chr1 31215396 - Exonic hg19 UCEC TCGA-AJ-A23N 3 5'UTR-CDS Intra-chr p36.13 p35.2 Seq+ 15607 ChimerSeq FusionScan TCGA_RNA-Seq ECHDC2-ATG16L1 ECHDC2 chr1 53387224 - ATG16L1 chr2 234164747 + Exonic hg19 UCEC TCGA-SL-A6JA 2 In-Frame Inter-chr p32.3 15608 ChimerSeq FusionScan TCGA_RNA-Seq CSNK1E-DDX17 CSNK1E chr22 38710086 - DDX17 chr22 38882445 - Exonic hg19 UCEC TCGA-B5-A0K8 2 In-Frame Intra-chr q13.1 q13.1 Seq+ 15609 ChimerSeq FusionScan TCGA_RNA-Seq CPNE2-NUP93 CPNE2 chr16 57171194 + NUP93 chr16 56857618 + Exonic hg19 UCEC TCGA-BS-A0U9 6 In-Frame Intra-chr q13 q13 Seq+ 15610 ChimerSeq FusionScan TCGA_RNA-Seq MTMR3-HEXIM2 MTMR3 chr22 30279348 + HEXIM2 chr17 43246381 + Exonic hg19 UCEC TCGA-BS-A0U9 5 5'UTR-CDS Inter-chr q12.2 q21.31 Seq+ 15611 ChimerSeq FusionScan TCGA_RNA-Seq UBR5-DRD4 UBR5 chr8 103424400 - DRD4 chr11 639432 + Exonic hg19 UCEC TCGA-BS-A0U9 2 Out-of-Frame Inter-chr q22.3 Oncogene p15.5 Seq+ 15612 ChimerSeq FusionScan TCGA_RNA-Seq SSU72-ASCC1 SSU72 chr1 1509857 - ASCC1 chr10 73887925 - Exonic hg19 UCEC TCGA-EY-A1GR 5 Out-of-Frame Inter-chr p36.33 q22.1 Seq+ 15613 ChimerSeq FusionScan TCGA_RNA-Seq ASXL1-TM9SF4 ASXL1 chr20 30956926 + TM9SF4 chr20 30737436 + Exonic hg19 UCEC TCGA-EY-A1GR 3 In-Frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 15614 ChimerSeq FusionScan TCGA_RNA-Seq PCM1-ZDHHC2 PCM1 chr8 17843596 + ZDHHC2 chr8 17042297 + Exonic hg19 UCEC TCGA-EY-A1GR 2 Out-of-Frame Intra-chr p22 p22 Tumor suppressor gene 15615 ChimerSeq FusionScan TCGA_RNA-Seq SSU72-ASCC1 SSU72 chr1 1509857 - ASCC1 chr10 73857208 - Exonic hg19 UCEC TCGA-EY-A1GR 2 Out-of-Frame Inter-chr p36.33 q22.1 Seq+ 15616 ChimerSeq FusionScan TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104722244 + LHFPL3 chr7 104546633 + Exonic hg19 UCEC TCGA-BG-A18C 2 Out-of-Frame Intra-chr q22.2 Seq+ 15617 ChimerSeq FusionScan TCGA_RNA-Seq HIP1-C3orf75 HIP1 chr7 75190632 - C3orf75 chr3 47545938 - Exonic hg19 UCEC TCGA-AJ-A3NC 2 In-Frame Inter-chr q11.23 15618 ChimerSeq FusionScan TCGA_RNA-Seq TMX1-STK3 TMX1 chr14 51707162 + STK3 chr8 99560389 - Exonic hg19 UCEC TCGA-AX-A3FZ 2 Out-of-Frame Inter-chr q22.1 q22.2 15619 ChimerSeq FusionScan TCGA_RNA-Seq DOT1L-CSNK1G2 DOT1L chr19 2180755 + CSNK1G2 chr19 1969506 + Exonic hg19 UCEC TCGA-BG-A0M6 5 CDS-5'UTR Intra-chr p13.3 Oncogene Transcription factor p13.3 Seq+ 15620 ChimerSeq FusionScan TCGA_RNA-Seq INADL-NFIA INADL chr1 62550320 + NFIA chr1 61920974 + Exonic hg19 UCEC TCGA-BG-A0M6 3 In-Frame Intra-chr p31.3 Transcription factor Seq+ 15621 ChimerSeq FusionScan TCGA_RNA-Seq SRSF9-COX6A1 SRSF9 chr12 120907224 - COX6A1 chr12 120876181 + Exonic hg19 UCEC TCGA-BG-A0M6 2 Out-of-Frame Intra-chr q24.31 q24.31 Seq+ 15622 ChimerSeq FusionScan TCGA_RNA-Seq ZBTB17-DLC1 ZBTB17 chr1 16299533 - DLC1 chr8 12973166 - Exonic hg19 UCEC TCGA-D1-A3JQ 5 5'UTR-5'UTR Inter-chr p36.13 Transcription factor p22 Tumor suppressor gene Seq+ 15623 ChimerSeq FusionScan TCGA_RNA-Seq ADK-C10orf11 ADK chr10 76430027 + C10orf11 chr10 78316966 + Exonic hg19 UCEC TCGA-D1-A3JQ 4 In-Frame Intra-chr q22.2 Seq+ 15624 ChimerSeq FusionScan TCGA_RNA-Seq TBCD-METRNL TBCD chr17 80869665 + METRNL chr17 81050911 + Exonic hg19 UCEC TCGA-D1-A3JQ 3 In-Frame Intra-chr Seq+ 15625 ChimerSeq FusionScan TCGA_RNA-Seq EMP2-AGBL4 EMP2 chr16 10674405 - AGBL4 chr1 50317190 - Exonic hg19 UCEC TCGA-D1-A3JQ 2 5'UTR-CDS Inter-chr p13.13 Tumor suppressor gene p33 15626 ChimerSeq FusionScan TCGA_RNA-Seq GDA-EPS8L2 GDA chr9 74764598 + EPS8L2 chr11 720061 + Exonic hg19 UCEC TCGA-A5-A0GR 4 In-Frame Inter-chr q21.13 p15.5 Seq+ 15627 ChimerSeq FusionScan TCGA_RNA-Seq USP48-INA USP48 chr1 22109316 - INA chr10 105046791 + Exonic hg19 UCEC TCGA-AJ-A3BF 7 Out-of-Frame Inter-chr p36.12 q24.33 Seq+ 15628 ChimerSeq FusionScan TCGA_RNA-Seq GPS1-BLVRA GPS1 chr17 80009840 + BLVRA chr7 43840063 + Exonic hg19 UCEC TCGA-AJ-A3BF 7 Out-of-Frame Inter-chr q25.3 p13 Seq+ 15629 ChimerSeq FusionScan TCGA_RNA-Seq ECE1-WNT4 ECE1 chr1 21599191 - WNT4 chr1 22448069 - Exonic hg19 UCEC TCGA-AJ-A3BF 6 In-Frame Intra-chr p36.12 p36.12 Seq+ 15630 ChimerSeq FusionScan TCGA_RNA-Seq PA2G4-RAB5B PA2G4 chr12 56503719 + RAB5B chr12 56385880 + Exonic hg19 UCEC TCGA-AJ-A3BF 3 Out-of-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 15631 ChimerSeq FusionScan TCGA_RNA-Seq C7orf44-BLVRA C7orf44 chr7 43769027 - BLVRA chr7 43810736 + Exonic hg19 UCEC TCGA-AJ-A3BF 2 5'UTR-5'UTR Intra-chr p13 Seq+ 15632 ChimerSeq FusionScan TCGA_RNA-Seq HDAC7-VSTM2B HDAC7 chr12 48213549 - VSTM2B chr19 30018117 + Exonic hg19 UCEC TCGA-AJ-A3BF 2 In-Frame Inter-chr q13.11 q12 Seq+ 15633 ChimerSeq FusionScan TCGA_RNA-Seq SMARCC1-MAP4 SMARCC1 chr3 47651555 - MAP4 chr3 47913590 - Exonic hg19 UCEC TCGA-AJ-A3BF 2 Out-of-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 15634 ChimerSeq FusionScan TCGA_RNA-Seq MTDH-SDC2 MTDH chr8 98673401 + SDC2 chr8 97605707 + Exonic hg19 UCEC TCGA-AX-A1CP 3 In-Frame Intra-chr q22.1 q22.1 Seq+ 15635 ChimerSeq FusionScan TCGA_RNA-Seq HN1-RECQL5 HN1 chr17 73150436 - RECQL5 chr17 73627748 - Exonic hg19 UCEC TCGA-KP-A3W1 4 In-Frame Intra-chr q25.1 Seq+ 15636 ChimerSeq FusionScan TCGA_RNA-Seq DPF2-POLA2 DPF2 chr11 65116402 + POLA2 chr11 65055186 + Exonic hg19 UCEC TCGA-D1-A179 4 In-Frame Intra-chr q13.1 q13.1 Seq+ 15637 ChimerSeq FusionScan TCGA_RNA-Seq LRIG1-SLC25A26 LRIG1 chr3 66550613 - SLC25A26 chr3 66419901 + Exonic hg19 UCEC TCGA-D1-A179 3 Out-of-Frame Intra-chr Tumor suppressor gene Seq+ 15638 ChimerSeq FusionScan TCGA_RNA-Seq NCOA3-EYA2 NCOA3 chr20 46280020 + EYA2 chr20 45717877 + Exonic hg19 UCEC TCGA-D1-A179 3 In-Frame Intra-chr q13.12 Transcription factor q13.12 Seq+ 15639 ChimerSeq FusionScan TCGA_RNA-Seq ABCA3-TCEB2 ABCA3 chr16 2390573 - TCEB2 chr16 2825557 - Exonic hg19 UCEC TCGA-D1-A179 2 3'UTR-CDS Intra-chr p13.3 Seq+ 15640 ChimerSeq FusionScan TCGA_RNA-Seq NCOA3-EYA2 NCOA3 chr20 46271128 + EYA2 chr20 45700823 + Exonic hg19 UCEC TCGA-D1-A179 2 Out-of-Frame Intra-chr q13.12 Transcription factor q13.12 Seq+ 15641 ChimerSeq FusionScan TCGA_RNA-Seq CBFA2T2-BPIFB1 CBFA2T2 chr20 32078107 + BPIFB1 chr20 31873838 + Exonic hg19 UCEC TCGA-D1-A179 2 CDS-5'UTR Intra-chr q11.21 q11.21 Seq+ 15642 ChimerSeq FusionScan TCGA_RNA-Seq CTNNA1-FAM53C CTNNA1 chr5 138119061 + FAM53C chr5 137682390 + Exonic hg19 UCEC TCGA-D1-A179 2 Out-of-Frame Intra-chr q31.2 Oncogene q31.2 15643 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC14-KLHDC4 ZCCHC14 chr16 87493613 - KLHDC4 chr16 87760530 - Exonic hg19 UCEC TCGA-D1-A179 2 Out-of-Frame Intra-chr q24.2 q24.2 15644 ChimerSeq FusionScan TCGA_RNA-Seq RFT1-TKT RFT1 chr3 53159924 - TKT chr3 53276258 - Exonic hg19 UCEC TCGA-B5-A5OD 4 In-Frame Intra-chr p21.1 p21.1 Tumor suppressor gene Seq+ 15645 ChimerSeq FusionScan TCGA_RNA-Seq MED25-CCDC155 MED25 chr19 50335672 + CCDC155 chr19 49910142 + Exonic hg19 UCEC TCGA-B5-A5OD 3 In-Frame Intra-chr q13.33 q13.33 Seq+ 15646 ChimerSeq FusionScan TCGA_RNA-Seq CDKN2D-HM13 CDKN2D chr19 10679622 - HM13 chr20 30154012 + Exonic hg19 UCEC TCGA-B5-A5OD 2 5'UTR-CDS Inter-chr p13.2 q11.21 Seq+ 15647 ChimerSeq FusionScan TCGA_RNA-Seq WIPF2-NFAM1 WIPF2 chr17 38375744 + NFAM1 chr22 42807742 - Exonic hg19 UCEC TCGA-B5-A5OD 2 5'UTR-CDS Inter-chr q21.2 q13.2 Seq+ 15648 ChimerSeq FusionScan TCGA_RNA-Seq SAV1-C22orf42 SAV1 chr14 51131896 - C22orf42 chr22 32550305 - Exonic hg19 UCEC TCGA-PG-A7D5 5 In-Frame Inter-chr q22.1 q12.3 15649 ChimerSeq FusionScan TCGA_RNA-Seq SAV1-C22orf42 SAV1 chr14 51131896 - C22orf42 chr22 32548613 - Exonic hg19 UCEC TCGA-PG-A7D5 2 In-Frame Inter-chr q22.1 q12.3 15650 ChimerSeq FusionScan TCGA_RNA-Seq TGOLN2-IMMT TGOLN2 chr2 85552037 - IMMT chr2 86372004 - Exonic hg19 UCEC TCGA-PG-A7D5 2 Out-of-Frame Intra-chr p11.2 p11.2 Seq+ 15651 ChimerSeq FusionScan TCGA_RNA-Seq CDON-DCPS CDON chr11 125848198 - DCPS chr11 126215241 + Exonic hg19 UCEC TCGA-PG-A7D5 2 Out-of-Frame Intra-chr q24.2 q24.2 Seq+ 15652 ChimerSeq FusionScan TCGA_RNA-Seq KIF3B-REM1 KIF3B chr20 30865568 + REM1 chr20 30070089 + Exonic hg19 UCEC TCGA-PG-A7D5 2 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 15653 ChimerSeq FusionScan TCGA_RNA-Seq GPATCH1-UPK1B GPATCH1 chr19 33588808 + UPK1B chr3 118922763 + Exonic hg19 UCEC TCGA-AX-A2H5 2 Out-of-Frame Inter-chr q13.11 q13.32 Seq+ 15654 ChimerSeq FusionScan TCGA_RNA-Seq RABGGTB-CCBL2 RABGGTB chr1 76253289 + CCBL2 chr1 89435150 - Exonic hg19 UCEC TCGA-AX-A2HJ 2 In-Frame Intra-chr p31.1 15655 ChimerSeq FusionScan TCGA_RNA-Seq EWSR1-KREMEN1 EWSR1 chr22 29688595 + KREMEN1 chr22 29521250 + Exonic hg19 UCEC TCGA-D1-A16R 4 In-Frame Intra-chr q12.2 q12.1 Seq+ 15656 ChimerSeq FusionScan TCGA_RNA-Seq TPM4-GPR37L1 TPM4 chr19 16204563 + GPR37L1 chr1 202096868 + Exonic hg19 UCEC TCGA-D1-A16R 3 Out-of-Frame Inter-chr p13.12 q32.1 15657 ChimerSeq FusionScan TCGA_RNA-Seq TPM3-GPR37L1 TPM3 chr1 154142875 - GPR37L1 chr1 202096868 + Exonic hg19 UCEC TCGA-D1-A16R 3 Out-of-Frame Intra-chr q21.3 q32.1 Seq+ 15658 ChimerSeq FusionScan TCGA_RNA-Seq DDX42-ACE DDX42 chr17 61852538 + ACE chr17 61557129 + Exonic hg19 UCEC TCGA-D1-A16R 3 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 15659 ChimerSeq FusionScan TCGA_RNA-Seq NCOR2-NOC4L NCOR2 chr12 124882664 - NOC4L chr12 132635525 + Exonic hg19 UCEC TCGA-D1-A16R 2 In-Frame Intra-chr q24.31 q24.33 15660 ChimerSeq FusionScan TCGA_RNA-Seq HIRIP3-INO80E HIRIP3 chr16 30006423 - INO80E chr16 30012078 + Exonic hg19 UCEC TCGA-D1-A1NW 10 In-Frame Intra-chr p11.2 p11.2 Seq+ 15661 ChimerSeq FusionScan TCGA_RNA-Seq EEF1G-AHNAK EEF1G chr11 62338436 - AHNAK chr11 62259303 - Exonic hg19 UCEC TCGA-D1-A1NW 4 In-Frame Intra-chr q12.3 q12.3 Tumor suppressor gene Seq+ 15662 ChimerSeq FusionScan TCGA_RNA-Seq SLX1B-SULT1A2 SLX1B chr16 29469336 + SULT1A2 chr16 28607255 - Exonic hg19 UCEC TCGA-D1-A1NW 2 5'UTR-5'UTR Intra-chr p11.2 p11.2 15663 ChimerSeq FusionScan TCGA_RNA-Seq HGS-CASC1 HGS chr17 79657772 + CASC1 chr12 25314131 - Exonic hg19 UCEC TCGA-B5-A1MY 2 In-Frame Inter-chr q25.3 p12.1 Tumor suppressor gene 15664 ChimerSeq FusionScan TCGA_RNA-Seq GPR64-PUS1 GPR64 chrX 19025352 - PUS1 chr12 132428083 + Exonic hg19 UCEC TCGA-D1-A16Y 2 In-Frame Inter-chr q24.33 15665 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R12C-DRD4 PPP1R12C chr19 55610151 - DRD4 chr11 639432 + Exonic hg19 UCEC TCGA-D1-A16Y 2 In-Frame Inter-chr q13.42 p15.5 15666 ChimerSeq FusionScan TCGA_RNA-Seq TMSB4X-ABHD2 TMSB4X chrX 12994480 + ABHD2 chr15 89694907 + Exonic hg19 UCEC TCGA-D1-A16Y 2 Out-of-Frame Inter-chr p22.2 q26.1 15667 ChimerSeq FusionScan TCGA_RNA-Seq LAMB1-PARP14 LAMB1 chr7 107591670 - PARP14 chr3 122446658 + Exonic hg19 UCEC TCGA-DI-A1C3 2 Out-of-Frame Inter-chr q31.1 q21.1 Seq+ 15668 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 UCEC TCGA-A5-A3LO 2 Out-of-Frame Intra-chr q22.2 q22.2 15669 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R37-CBLC PPP1R37 chr19 45646891 + CBLC chr19 45303637 + Exonic hg19 UCEC TCGA-AX-A2H2 8 In-Frame Intra-chr q13.32 q13.32 Seq+ 15670 ChimerSeq FusionScan TCGA_RNA-Seq PARD3-DYNLL2 PARD3 chr10 34985245 - DYNLL2 chr17 56164442 + Exonic hg19 UCEC TCGA-AX-A2H2 3 CDS-5'UTR Inter-chr p11.21 q22 Seq+ 15671 ChimerSeq FusionScan TCGA_RNA-Seq TTLL5-IFT43 TTLL5 chr14 76368567 + IFT43 chr14 76455227 + Exonic hg19 UCEC TCGA-AX-A2H2 2 Out-of-Frame Intra-chr q24.3 q24.3 Seq+ 15672 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD28-COLQ ANKRD28 chr3 15900883 - COLQ chr3 15531144 - Exonic hg19 UCEC TCGA-AX-A2H2 2 Out-of-Frame Intra-chr p25.1 p25.1 Seq+ 15673 ChimerSeq FusionScan TCGA_RNA-Seq DMWD-HRSP12 DMWD chr19 46294162 - HRSP12 chr8 99120979 - Exonic hg19 UCEC TCGA-AX-A2H2 2 Out-of-Frame Inter-chr q13.32 Seq+ 15674 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R37-CBLC PPP1R37 chr19 45645716 + CBLC chr19 45303637 + Exonic hg19 UCEC TCGA-AX-A2H2 2 Out-of-Frame Intra-chr q13.32 q13.32 Seq+ 15675 ChimerSeq FusionScan TCGA_RNA-Seq CTNNA2-REG3G CTNNA2 chr2 79878784 + REG3G chr2 79253108 + Exonic hg19 UCEC TCGA-B5-A3FD 5 CDS-5'UTR Intra-chr p12 Tumor suppressor gene p12 Seq+ 15676 ChimerSeq FusionScan TCGA_RNA-Seq RPLP1-TJP1 RPLP1 chr15 69745359 + TJP1 chr15 30092905 - Exonic hg19 UCEC TCGA-B5-A3FD 2 In-Frame Intra-chr q23 15677 ChimerSeq FusionScan TCGA_RNA-Seq ANXA4-BCAR4 ANXA4 chr2 69969307 + BCAR4 chr16 11915612 - Exonic hg19 UCEC TCGA-AJ-A6NU 2 5'UTR-3'UTR Inter-chr p13.3 p13.13 Seq+ 15678 ChimerSeq FusionScan TCGA_RNA-Seq ZNF618-KIAA0195 ZNF618 chr9 116638693 + KIAA0195 chr17 73467880 + Exonic hg19 UCEC TCGA-AJ-A6NU 2 CDS-5'UTR Inter-chr q32 Transcription factor Seq+ 15679 ChimerSeq FusionScan TCGA_RNA-Seq ANXA4-BCAR4 ANXA4 chr2 69969307 + BCAR4 chr16 11914154 - Exonic hg19 UCEC TCGA-AJ-A6NU 2 5'UTR-3'UTR Inter-chr p13.3 p13.13 Seq+ 15680 ChimerSeq FusionScan TCGA_RNA-Seq FZR1-GNA11 FZR1 chr19 3534511 + GNA11 chr19 3113327 + Exonic hg19 UCEC TCGA-FI-A2D2 7 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Oncogene Seq+ 15681 ChimerSeq FusionScan TCGA_RNA-Seq RAB20-CARS2 RAB20 chr13 111213694 - CARS2 chr13 111299586 - Exonic hg19 UCEC TCGA-FI-A2D2 3 In-Frame Intra-chr q34 q34 Seq+ 15682 ChimerSeq FusionScan TCGA_RNA-Seq RTN4R-RPL23A RTN4R chr22 20255593 - RPL23A chr17 27047724 + Exonic hg19 UCEC TCGA-FI-A2D2 3 In-Frame Inter-chr q11.21 q11.2 15683 ChimerSeq FusionScan TCGA_RNA-Seq MLL3-DENND2A MLL3 chr7 152132710 - DENND2A chr7 140255513 - Exonic hg19 UCEC TCGA-FI-A2D2 2 Out-of-Frame Intra-chr Tumor suppressor gene q34 15684 ChimerSeq FusionScan TCGA_RNA-Seq RERE-SLC2A5 RERE chr1 8716031 - SLC2A5 chr1 9101996 - Exonic hg19 UCEC TCGA-FI-A2D2 2 In-Frame Intra-chr p36.23 p36.23 Seq+ 15685 ChimerSeq FusionScan TCGA_RNA-Seq CPOX-RAB11A CPOX chr3 98309475 - RAB11A chr15 66180038 + Exonic hg19 UCEC TCGA-FI-A2EW 2 In-Frame Inter-chr q11.2 q22.31 15686 ChimerSeq FusionScan TCGA_RNA-Seq FKBP14-SND1 FKBP14 chr7 30065927 - SND1 chr7 127347610 + Exonic hg19 UCEC TCGA-B5-A3FH 2 In-Frame Intra-chr p14.3 q32.1 15687 ChimerSeq FusionScan TCGA_RNA-Seq CHIC1-CDX4 CHIC1 chrX 72804408 + CDX4 chrX 72673352 + Exonic hg19 UCEC TCGA-B5-A3FH 2 Out-of-Frame Intra-chr q13.2 q13.2 Transcription factor Seq+ 15688 ChimerSeq FusionScan TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61612310 - ANK3 chr10 61973268 - Exonic hg19 UCEC TCGA-D1-A16J 2 In-Frame Intra-chr q21.2 q21.2 Seq+ 15689 ChimerSeq FusionScan TCGA_RNA-Seq ERBB4-MST1R ERBB4 chr2 213403172 - MST1R chr3 49932806 - Exonic hg19 UCEC TCGA-BG-A0LX 2 In-Frame Inter-chr q34 Oncogene Tumor suppressor gene p21.31 Tumor suppressor gene 15690 ChimerSeq FusionScan TCGA_RNA-Seq RRAS2-MBLAC2 RRAS2 chr11 14316016 - MBLAC2 chr5 89757369 - Exonic hg19 UCEC TCGA-D1-A0ZN 2 Out-of-Frame Inter-chr p15.2 q14.3 15691 ChimerSeq FusionScan TCGA_RNA-Seq PIEZO1-GALNS PIEZO1 chr16 88851308 - GALNS chr16 88893246 - Exonic hg19 UCEC TCGA-AJ-A3EM 7 Out-of-Frame Intra-chr q24.3 q24.3 Seq+ 15692 ChimerSeq FusionScan TCGA_RNA-Seq HMBOX1-PNOC HMBOX1 chr8 28748195 + PNOC chr8 28186651 + Exonic hg19 UCEC TCGA-AJ-A3EM 6 5'UTR-5'UTR Intra-chr p21.1 Transcription factor p21.1 Seq+ 15693 ChimerSeq FusionScan TCGA_RNA-Seq DEPDC5-BID DEPDC5 chr22 32154619 + BID chr22 18232940 - Exonic hg19 UCEC TCGA-AJ-A3EM 6 In-Frame Intra-chr q12.2 q11.21 Seq+ 15694 ChimerSeq FusionScan TCGA_RNA-Seq CEP70-GYG1 CEP70 chr3 138289875 - GYG1 chr3 148741839 + Exonic hg19 UCEC TCGA-AJ-A3EM 5 In-Frame Intra-chr q22.3 q24 Seq+ 15695 ChimerSeq FusionScan TCGA_RNA-Seq USP6NL-VPS26A USP6NL chr10 11543099 - VPS26A chr10 70915567 + Exonic hg19 UCEC TCGA-AJ-A3EM 4 In-Frame Intra-chr p14 q22.1 Seq+ 15696 ChimerSeq FusionScan TCGA_RNA-Seq ACO2-PRR5 ACO2 chr22 41895866 + PRR5 chr22 45121123 + Exonic hg19 UCEC TCGA-AJ-A3EM 2 5'UTR-5'UTR Intra-chr q13.2 q13.31 Tumor suppressor gene Seq+ 15697 ChimerSeq FusionScan TCGA_RNA-Seq SPATA13-HSCB SPATA13 chr13 24735071 + HSCB chr22 29147228 + Exonic hg19 UCEC TCGA-AJ-A3EM 2 5'UTR-CDS Inter-chr q12.12 q12.1 Seq+ 15698 ChimerSeq FusionScan TCGA_RNA-Seq CEP70-GYG1 CEP70 chr3 138313039 - GYG1 chr3 148741839 + Exonic hg19 UCEC TCGA-AJ-A3EM 2 5'UTR-CDS Intra-chr q22.3 q24 Seq+ 15699 ChimerSeq FusionScan TCGA_RNA-Seq ACO2-PRR5 ACO2 chr22 41895866 + PRR5 chr22 45110470 + Exonic hg19 UCEC TCGA-AJ-A3EM 2 5'UTR-5'UTR Intra-chr q13.2 q13.31 Tumor suppressor gene Seq+ 15700 ChimerSeq FusionScan TCGA_RNA-Seq RASGRP1-CD47 RASGRP1 chr15 38852021 - CD47 chr3 107799191 - Exonic hg19 UCEC TCGA-AJ-A3EM 2 In-Frame Inter-chr q14 q13.12 Seq+ 15701 ChimerSeq FusionScan TCGA_RNA-Seq SRGAP2P2-TCFL5 SRGAP2P2 chr1 143916308 + TCFL5 chr20 61473449 - Exonic hg19 UCEC TCGA-AJ-A3EM 2 5'UTR-CDS Inter-chr q13.33 Transcription factor 15702 ChimerSeq FusionScan TCGA_RNA-Seq PLXNB2-TMPRSS6 PLXNB2 chr22 50733147 - TMPRSS6 chr22 37499458 - Exonic hg19 UCEC TCGA-AJ-A3EM 2 5'UTR-CDS Intra-chr q13.33 q12.3 Tumor suppressor gene Seq+ 15703 ChimerSeq FusionScan TCGA_RNA-Seq F11R-COPA F11R chr1 160990799 - COPA chr1 160310084 - Exonic hg19 UCEC TCGA-AJ-A3EM 2 In-Frame Intra-chr q23.3 q23.2 Seq+ 15704 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD11-TBCD ANKRD11 chr16 89484691 - TBCD chr17 80828099 + Exonic hg19 UCEC TCGA-AX-A06L 5 5'UTR-CDS Inter-chr q24.3 Seq+ 15705 ChimerSeq FusionScan TCGA_RNA-Seq C11orf51-MUC16 C11orf51 chr11 71821133 - MUC16 chr19 9002673 - Exonic hg19 UCEC TCGA-AX-A06L 2 Out-of-Frame Inter-chr p13.2 15706 ChimerSeq FusionScan TCGA_RNA-Seq PODXL-TMIGD1 PODXL chr7 131241018 - TMIGD1 chr17 28652112 - Exonic hg19 UCEC TCGA-DI-A2QU 2 In-Frame Inter-chr q32.3 q11.2 15707 ChimerSeq FusionScan TCGA_RNA-Seq GPI-UBA2 GPI chr19 34859607 + UBA2 chr19 34949673 + Exonic hg19 UCEC TCGA-DI-A2QU 2 In-Frame Intra-chr q13.11 15708 ChimerSeq FusionScan TCGA_RNA-Seq ZNF222-PSG8 ZNF222 chr19 44531642 + PSG8 chr19 43268433 - Exonic hg19 UCEC TCGA-AJ-A3TW 2 In-Frame Intra-chr q13.31 Transcription factor q13.2 15709 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA13-SUGP1 NDUFA13 chr19 19627141 + SUGP1 chr19 19391100 - Exonic hg19 UCEC TCGA-AJ-A3TW 2 In-Frame Intra-chr p13.11 p13.11 Seq+ 15710 ChimerSeq FusionScan TCGA_RNA-Seq ZNF222-PSG1 ZNF222 chr19 44531642 + PSG1 chr19 43382430 - Exonic hg19 UCEC TCGA-AJ-A3TW 2 In-Frame Intra-chr q13.31 Transcription factor q13.2 15711 ChimerSeq FusionScan TCGA_RNA-Seq NOMO2-TUBA1C NOMO2 chr16 18573197 - TUBA1C chr12 49663247 + Exonic hg19 UCEC TCGA-AP-A1DK 2 In-Frame Inter-chr p12.3 q13.12 15712 ChimerSeq FusionScan TCGA_RNA-Seq FOXJ3-TUFT1 FOXJ3 chr1 42744018 - TUFT1 chr1 151535060 + Exonic hg19 UCEC TCGA-BK-A26L 3 In-Frame Intra-chr p34.2 Transcription factor q21.3 Seq+ 15713 ChimerSeq FusionScan TCGA_RNA-Seq ARID3B-USP47 ARID3B chr15 74833671 + USP47 chr11 11906013 + Exonic hg19 UCEC TCGA-BK-A26L 2 5'UTR-CDS Inter-chr q24.1 Transcription factor p15.3 Seq+ 15714 ChimerSeq FusionScan TCGA_RNA-Seq HIPK2-PARP12 HIPK2 chr7 139415730 - PARP12 chr7 139728488 - Exonic hg19 UCEC TCGA-KP-A3W4 5 In-Frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Seq+ 15715 ChimerSeq FusionScan TCGA_RNA-Seq HIPK2-PARP12 HIPK2 chr7 139415730 - PARP12 chr7 139727206 - Exonic hg19 UCEC TCGA-KP-A3W4 2 Out-of-Frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Seq+ 15716 ChimerSeq FusionScan TCGA_RNA-Seq HIPK2-PARP12 HIPK2 chr7 139415730 - PARP12 chr7 139726148 - Exonic hg19 UCEC TCGA-KP-A3W4 2 In-Frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Seq+ 15717 ChimerSeq FusionScan TCGA_RNA-Seq MAP4K5-PYGL MAP4K5 chr14 50929382 - PYGL chr14 51383823 - Exonic hg19 UCEC TCGA-D1-A16G 4 In-Frame Intra-chr q22.1 q22.1 Seq+ 15718 ChimerSeq FusionScan TCGA_RNA-Seq PVT1-GLTPD1 PVT1 chr8 128806980 + GLTPD1 chr1 1262215 + Exonic hg19 UCEC TCGA-D1-A16G 4 5'UTR-5'UTR Inter-chr q24.21 Seq+ 15719 ChimerSeq FusionScan TCGA_RNA-Seq ODF2-SLC27A4 ODF2 chr9 131236020 + SLC27A4 chr9 131122612 + Exonic hg19 UCEC TCGA-D1-A16G 3 Out-of-Frame Intra-chr q34.11 q34.11 Seq+ 15720 ChimerSeq FusionScan TCGA_RNA-Seq AXIN2-GOSR1 AXIN2 chr17 63537572 - GOSR1 chr17 28808160 + Exonic hg19 UCEC TCGA-A5-A2K5 2 Out-of-Frame Intra-chr q24.1 Tumor suppressor gene q11.2 15721 ChimerSeq FusionScan TCGA_RNA-Seq TRIM2-RPS3 TRIM2 chr4 154125712 + RPS3 chr11 75115715 + Exonic hg19 UCEC TCGA-A5-A2K5 2 Out-of-Frame Inter-chr q31.3 q13.4 15722 ChimerSeq FusionScan TCGA_RNA-Seq DAZAP1-HMHA1 DAZAP1 chr19 1418369 + HMHA1 chr19 1077855 + Exonic hg19 UCEC TCGA-AJ-A23M 4 In-Frame Intra-chr p13.3 Seq+ 15723 ChimerSeq FusionScan TCGA_RNA-Seq NUDT3-SPDEF NUDT3 chr6 34360040 - SPDEF chr6 34512261 - Exonic hg19 UCEC TCGA-AJ-A23M 3 CDS-5'UTR Intra-chr p21.31 p21.31 Transcription factor Seq+ 15724 ChimerSeq FusionScan TCGA_RNA-Seq ITFG3-HBZ ITFG3 chr16 284856 + HBZ chr16 203890 + Exonic hg19 UCEC TCGA-AJ-A23M 2 5'UTR-CDS Intra-chr p13.3 15725 ChimerSeq FusionScan TCGA_RNA-Seq DCDC2-FAAH DCDC2 chr6 24302195 - FAAH chr1 46867762 + Exonic hg19 UCEC TCGA-AJ-A23M 2 Out-of-Frame Inter-chr p22.3 Tumor suppressor gene p33 Seq+ 15726 ChimerSeq FusionScan TCGA_RNA-Seq GTF2H2D-NAIP GTF2H2D chr5 68878256 + NAIP chr5 70266295 - Exonic hg19 UCEC TCGA-BK-A6W3 2 Out-of-Frame Intra-chr q13.2 15727 ChimerSeq FusionScan TCGA_RNA-Seq S100PBP-RBBP4 S100PBP chr1 33291030 + RBBP4 chr1 33117514 + Exonic hg19 UCEC TCGA-B5-A0K3 4 5'UTR-5'UTR Intra-chr p35.1 p35.1 15728 ChimerSeq FusionScan TCGA_RNA-Seq FAM222B-CAT FAM222B chr17 27161310 - CAT chr11 34477557 + Exonic hg19 UCEC TCGA-B5-A0K3 3 5'UTR-CDS Inter-chr q11.2 p13 Tumor suppressor gene 15729 ChimerSeq FusionScan TCGA_RNA-Seq DLG4-SHBG DLG4 chr17 7106221 - SHBG chr17 7536521 + Exonic hg19 UCEC TCGA-B5-A0K3 3 In-Frame Intra-chr p13.1 Tumor suppressor gene p13.1 15730 ChimerSeq FusionScan TCGA_RNA-Seq ASAP2-ERI3 ASAP2 chr2 9460466 + ERI3 chr1 44687312 - Exonic hg19 UCEC TCGA-B5-A0K3 2 Out-of-Frame Inter-chr p25.1 p34.1 15731 ChimerSeq FusionScan TCGA_RNA-Seq CCDC137-ACADVL CCDC137 chr17 79639185 + ACADVL chr17 7124856 + Exonic hg19 UCEC TCGA-B5-A0K3 2 In-Frame Intra-chr q25.3 p13.1 15732 ChimerSeq FusionScan TCGA_RNA-Seq FAM213A-DYDC2 FAM213A chr10 82182264 + DYDC2 chr10 82126443 + Exonic hg19 UCEC TCGA-B5-A0K3 2 In-Frame Intra-chr q23.1 q23.1 15733 ChimerSeq FusionScan TCGA_RNA-Seq FAM222B-CAT FAM222B chr17 27169699 - CAT chr11 34477557 + Exonic hg19 UCEC TCGA-B5-A0K3 2 5'UTR-CDS Inter-chr q11.2 p13 Tumor suppressor gene 15734 ChimerSeq FusionScan TCGA_RNA-Seq HRH1-ATG7 HRH1 chr3 11179085 + ATG7 chr3 11340159 + Exonic hg19 UCEC TCGA-D1-A15Z 2 5'UTR-5'UTR Intra-chr p25.3 p25.3 Seq+ 15735 ChimerSeq FusionScan TCGA_RNA-Seq CPNE2-MT1E CPNE2 chr16 57126702 + MT1E chr16 56660377 + Exonic hg19 UCEC TCGA-AJ-A3NH 10 5'UTR-CDS Intra-chr q13 q13 Seq+ 15736 ChimerSeq FusionScan TCGA_RNA-Seq RFXANK-SUGP1 RFXANK chr19 19310043 + SUGP1 chr19 19391100 - Exonic hg19 UCEC TCGA-AJ-A3NH 7 In-Frame Intra-chr p13.11 p13.11 Seq+ 15737 ChimerSeq FusionScan TCGA_RNA-Seq FAM168A-RAB6A FAM168A chr11 73308967 - RAB6A chr11 73431944 - Exonic hg19 UCEC TCGA-AJ-A3NH 6 5'UTR-CDS Intra-chr q13.4 q13.4 Seq+ 15738 ChimerSeq FusionScan TCGA_RNA-Seq FBXO17-LGALS7B FBXO17 chr19 39466225 - LGALS7B chr19 39281328 + Exonic hg19 UCEC TCGA-AJ-A3NH 2 5'UTR-CDS Intra-chr 15739 ChimerSeq FusionScan TCGA_RNA-Seq SMARCA4-C19orf38 SMARCA4 chr19 11123788 + C19orf38 chr19 10968991 + Exonic hg19 UCEC TCGA-D1-A16S 3 Out-of-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 15740 ChimerSeq FusionScan TCGA_RNA-Seq MORC2-PATZ1 MORC2 chr22 31352748 - PATZ1 chr22 31724845 - Exonic hg19 UCEC TCGA-D1-A16S 2 5'UTR-CDS Intra-chr q12.2 q12.2 Transcription factor Seq+ 15741 ChimerSeq FusionScan TCGA_RNA-Seq SNX24-SNCAIP SNX24 chr5 122281854 + SNCAIP chr5 121776323 + Exonic hg19 UCEC TCGA-D1-A16S 2 In-Frame Intra-chr q23.2 q23.2 Seq+ 15742 ChimerSeq FusionScan TCGA_RNA-Seq VAPB-SLC17A9 VAPB chr20 56964573 + SLC17A9 chr20 61591855 + Exonic hg19 UCEC TCGA-DI-A1NO 3 In-Frame Intra-chr q13.32 q13.33 Seq+ 15743 ChimerSeq FusionScan TCGA_RNA-Seq MSLN-RAB11FIP3 MSLN chr16 817012 + RAB11FIP3 chr16 538850 + Exonic hg19 UCEC TCGA-DI-A1NO 2 Out-of-Frame Intra-chr p13.3 Seq+ 15744 ChimerSeq FusionScan TCGA_RNA-Seq FRYL-OCIAD2 FRYL chr4 48782094 - OCIAD2 chr4 48896070 - Exonic hg19 UCEC TCGA-AJ-A2QN 4 5'UTR-CDS Intra-chr p11 p11 Seq+ 15745 ChimerSeq FusionScan TCGA_RNA-Seq MTMR3-CLIP2 MTMR3 chr22 30279348 + CLIP2 chr7 73811403 + Exonic hg19 UCEC TCGA-D1-A3JP 5 5'UTR-CDS Inter-chr q12.2 q11.23 Seq+ 15746 ChimerSeq FusionScan TCGA_RNA-Seq NVL-SUSD4 NVL chr1 224517772 - SUSD4 chr1 223442017 - Exonic hg19 UCEC TCGA-D1-A3JP 4 Out-of-Frame Intra-chr q42.11 q41 Seq+ 15747 ChimerSeq FusionScan TCGA_RNA-Seq SUSD4-DEGS1 SUSD4 chr1 223536619 - DEGS1 chr1 224377278 + Exonic hg19 UCEC TCGA-D1-A3JP 3 In-Frame Intra-chr q41 q42.11 Seq+ 15748 ChimerSeq FusionScan TCGA_RNA-Seq B3GNT3-INSL3 B3GNT3 chr19 17906015 + INSL3 chr19 17927868 - Exonic hg19 UCEC TCGA-D1-A3JP 3 5'UTR-CDS Intra-chr p13.11 p13.11 Seq+ 15749 ChimerSeq FusionScan TCGA_RNA-Seq PEPD-CEBPG PEPD chr19 33902577 - CEBPG chr19 33870049 + Exonic hg19 UCEC TCGA-D1-A3JP 2 CDS-5'UTR Intra-chr q13.11 q13.11 Transcription factor Seq+ 15750 ChimerSeq FusionScan TCGA_RNA-Seq MTMR3-CLIP2 MTMR3 chr22 30279348 + CLIP2 chr7 73814699 + Exonic hg19 UCEC TCGA-D1-A3JP 2 5'UTR-CDS Inter-chr q12.2 q11.23 Seq+ 15751 ChimerSeq FusionScan TCGA_RNA-Seq MEF2A-LRRC28 MEF2A chr15 100215663 + LRRC28 chr15 99892573 + Exonic hg19 UCEC TCGA-PG-A5BC 4 In-Frame Intra-chr q26.3 Transcription factor q26.3 Seq+ 15752 ChimerSeq FusionScan TCGA_RNA-Seq ZNF43-RAPGEF4 ZNF43 chr19 22034706 - RAPGEF4 chr2 173659752 + Exonic hg19 UCEC TCGA-PG-A5BC 2 Out-of-Frame Inter-chr p12 Transcription factor q31.1 15753 ChimerSeq FusionScan TCGA_RNA-Seq REV3L-TRAF3IP2 REV3L chr6 111714078 - TRAF3IP2 chr6 111913297 - Exonic hg19 UCEC TCGA-PG-A5BC 2 CDS-5'UTR Intra-chr q21 q21 Seq+ 15754 ChimerSeq FusionScan TCGA_RNA-Seq CASK-SRSF12 CASK chrX 41598636 - SRSF12 chr6 89808666 - Exonic hg19 UCEC TCGA-PG-A5BC 2 Out-of-Frame Inter-chr p11.4 CAMK:CASK q15 15755 ChimerSeq FusionScan TCGA_RNA-Seq RFWD2-FBXO28 RFWD2 chr1 176118141 - FBXO28 chr1 224318173 + Exonic hg19 UCEC TCGA-PG-A5BC 2 In-Frame Intra-chr q25.2 Tumor suppressor gene q42.11 15756 ChimerSeq FusionScan TCGA_RNA-Seq POC1A-TWF2 POC1A chr3 52172184 - TWF2 chr3 52265555 - Exonic hg19 UCEC TCGA-PG-A5BC 2 In-Frame Intra-chr p21.2 p21.2 Seq+ 15757 ChimerSeq FusionScan TCGA_RNA-Seq DOPEY1-SUGT1 DOPEY1 chr6 83777498 + SUGT1 chr13 53250364 + Exonic hg19 UCEC TCGA-A5-A0GP 2 5'UTR-CDS Inter-chr q14.1 q14.3 15758 ChimerSeq FusionScan TCGA_RNA-Seq RABGAP1L-RFWD2 RABGAP1L chr1 174843644 + RFWD2 chr1 176104222 - Exonic hg19 UCEC TCGA-A5-A0GP 2 5'UTR-CDS Intra-chr q25.1 q25.2 Tumor suppressor gene 15759 ChimerSeq FusionScan TCGA_RNA-Seq EIF4B-RPLP0 EIF4B chr12 53431406 + RPLP0 chr12 120635265 - Exonic hg19 UCEC TCGA-EO-A3AY 2 Out-of-Frame Intra-chr q13.13 q24.23 15760 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175394270 - Exonic hg19 UCEC TCGA-D1-A1O8 2 5'UTR-CDS Inter-chr q21.1 q35.2 15761 ChimerSeq FusionScan TCGA_RNA-Seq KLC1-MARK3 KLC1 chr14 104095831 + MARK3 chr14 103969218 + Exonic hg19 UCEC TCGA-B5-A0JN 5 5'UTR-CDS Intra-chr q32.33 q32.32 CAMK:CAMKL Seq+ 15762 ChimerSeq FusionScan TCGA_RNA-Seq PEX14-KIF1B PEX14 chr1 10535059 + KIF1B chr1 10434373 + Exonic hg19 UCEC TCGA-B5-A0JN 2 Out-of-Frame Intra-chr p36.22 p36.22 Tumor suppressor gene Seq+ 15763 ChimerSeq FusionScan TCGA_RNA-Seq TUBB3-TCF25 TUBB3 chr16 89989866 + TCF25 chr16 89976998 + Exonic hg19 UCEC TCGA-B5-A0JN 2 Out-of-Frame Intra-chr q24.3 q24.3 15764 ChimerSeq FusionScan TCGA_RNA-Seq GPX4-ARID3A GPX4 chr19 1105808 + ARID3A chr19 968404 + Exonic hg19 UCEC TCGA-FI-A2EX 5 Out-of-Frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 15765 ChimerSeq FusionScan TCGA_RNA-Seq SRC-RPN2 SRC chr20 35993680 + RPN2 chr20 35858375 + Exonic hg19 UCEC TCGA-FI-A2EX 4 5'UTR-CDS Intra-chr q11.23 TK:Src Oncogene q11.23 Seq+ 15766 ChimerSeq FusionScan TCGA_RNA-Seq BCAS3-VMP1 BCAS3 chr17 58786686 + VMP1 chr17 57886156 + Exonic hg19 UCEC TCGA-FI-A2EX 4 In-Frame Intra-chr q23.2 q23.1 Seq+ 15767 ChimerSeq FusionScan TCGA_RNA-Seq PPP4R1-VAPA PPP4R1 chr18 9614223 - VAPA chr18 9931806 + Exonic hg19 UCEC TCGA-FI-A2EX 2 In-Frame Intra-chr p11.22 p11.22 15768 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D3F-PACS1 TBC1D3F chr17 36290042 + PACS1 chr11 66002771 + Exonic hg19 UCEC TCGA-FI-A2EX 2 Out-of-Frame Inter-chr q12 q13.1 15769 ChimerSeq FusionScan TCGA_RNA-Seq TECR-PKN1 TECR chr19 14640523 + PKN1 chr19 14580152 + Exonic hg19 UCEC TCGA-A5-A3LP 7 Out-of-Frame Intra-chr p13.12 p13.12 AGC:PKN Seq+ 15770 ChimerSeq FusionScan TCGA_RNA-Seq RPTOR-CD163 RPTOR chr17 78599593 + CD163 chr12 7655160 - Exonic hg19 UCEC TCGA-A5-A3LP 3 In-Frame Inter-chr q25.3 p13.31 Seq+ 15771 ChimerSeq FusionScan TCGA_RNA-Seq SLC25A29-WARS SLC25A29 chr14 100765178 - WARS chr14 100808908 - Exonic hg19 UCEC TCGA-A5-A3LP 2 In-Frame Intra-chr q32.2 q32.2 Seq+ 15772 ChimerSeq FusionScan TCGA_RNA-Seq EML1-CDC27 EML1 chr14 100387214 + CDC27 chr17 45249430 - Exonic hg19 UCEC TCGA-A5-A3LP 2 In-Frame Inter-chr q32.2 q21.32 Seq+ 15773 ChimerSeq FusionScan TCGA_RNA-Seq PPP6R2-PDE4DIP PPP6R2 chr22 50810579 + PDE4DIP chr1 144912294 - Exonic hg19 UCEC TCGA-A5-A3LP 2 5'UTR-CDS Inter-chr q13.33 q21.2 Oncogene 15774 ChimerSeq FusionScan TCGA_RNA-Seq GSPT1-BCAR4 GSPT1 chr16 11976871 - BCAR4 chr16 11914154 - Exonic hg19 UCEC TCGA-SL-A6J9 3 CDS-3'UTR Intra-chr p13.13 p13.13 15775 ChimerSeq FusionScan TCGA_RNA-Seq RAD50-SLC22A4 RAD50 chr5 131973915 + SLC22A4 chr5 131670410 + Exonic hg19 UCEC TCGA-SL-A6J9 2 Out-of-Frame Intra-chr q31.1 Oncogene q31.1 Seq+ 15776 ChimerSeq FusionScan TCGA_RNA-Seq UNC5C-VTA1 UNC5C chr4 96256560 - VTA1 chr6 142519575 + Exonic hg19 UCEC TCGA-EY-A2OO 2 In-Frame Inter-chr q22.3 Tumor suppressor gene q24.1 15777 ChimerSeq FusionScan TCGA_RNA-Seq C19orf10-CD37 C19orf10 chr19 4668606 - CD37 chr19 49838970 + Exonic hg19 UCEC TCGA-A5-A0R7 2 In-Frame Intra-chr q13.33 Seq+ 15778 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 UCEC TCGA-BG-A3EW 2 Out-of-Frame Intra-chr q22.2 q22.2 15779 ChimerSeq FusionScan TCGA_RNA-Seq BACE2-PUS1 BACE2 chr21 42540502 + PUS1 chr12 132423717 + Exonic hg19 UCEC TCGA-D1-A2G5 2 In-Frame Inter-chr q22.2 q24.33 15780 ChimerSeq FusionScan TCGA_RNA-Seq PIK3CA-KCNMB3 PIK3CA chr3 178866391 + KCNMB3 chr3 178968722 - Exonic hg19 UCEC TCGA-D1-A15V 4 5'UTR-CDS Intra-chr q26.32 Oncogene q26.32 Seq+ 15781 ChimerSeq FusionScan TCGA_RNA-Seq PROSC-NDEL1 PROSC chr8 37623873 + NDEL1 chr17 8347577 + Exonic hg19 UCEC TCGA-BK-A4ZD 2 CDS-5'UTR Inter-chr p13.1 15782 ChimerSeq FusionScan TCGA_RNA-Seq ZNF704-GFER ZNF704 chr8 81733608 - GFER chr16 2035866 + Exonic hg19 UCEC TCGA-AX-A1CF 2 In-Frame Inter-chr q21.13 Transcription factor p13.3 Seq+ 15783 ChimerSeq FusionScan TCGA_RNA-Seq RPS13-COL3A1 RPS13 chr11 17098714 - COL3A1 chr2 189871662 + Exonic hg19 UCEC TCGA-EY-A2OM 2 3'UTR-CDS Inter-chr p15.1 q32.2 15784 ChimerSeq FusionScan TCGA_RNA-Seq DIS3L2-PSMD1 DIS3L2 chr2 232826475 + PSMD1 chr2 232010953 + Exonic hg19 UCEC TCGA-AP-A05J 2 5'UTR-5'UTR Intra-chr q37.1 q37.1 Seq+ 15785 ChimerSeq FusionScan TCGA_RNA-Seq ESF1-ATP5D ESF1 chr20 13740338 - ATP5D chr19 1242454 + Exonic hg19 UCEC TCGA-AX-A06B 2 Out-of-Frame Inter-chr p12.1 p13.3 15786 ChimerSeq FusionScan TCGA_RNA-Seq BPTF-NOL11 BPTF chr17 65822453 + NOL11 chr17 65730478 + Exonic hg19 UCEC TCGA-D1-A2G7 2 In-Frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 15787 ChimerSeq FusionScan TCGA_RNA-Seq NLRC5-ILF2 NLRC5 chr16 57054919 + ILF2 chr1 153636950 - Exonic hg19 UCEC TCGA-D1-A2G7 2 In-Frame Inter-chr q13 q21.3 15788 ChimerSeq FusionScan TCGA_RNA-Seq SEMA6C-THEM4 SEMA6C chr1 151111900 - THEM4 chr1 151867670 - Exonic hg19 UCEC TCGA-D1-A2G7 2 In-Frame Intra-chr q21.3 q21.3 Seq+ 15789 ChimerSeq FusionScan TCGA_RNA-Seq NOTCH2NL-TBC1D22A NOTCH2NL chr1 145281704 + TBC1D22A chr22 47432966 + Exonic hg19 UCEC TCGA-DI-A0WH 2 In-Frame Inter-chr q21.1 q13.31 15790 ChimerSeq FusionScan TCGA_RNA-Seq WASF2-IFI6 WASF2 chr1 27816496 - IFI6 chr1 27995857 - Exonic hg19 UCEC TCGA-DI-A2QT 2 5'UTR-5'UTR Intra-chr p36.11 p35.3 Seq+ 15791 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPA2B1-USF2 HNRNPA2B1 chr7 26233194 - USF2 chr19 35760705 + Exonic hg19 UCEC TCGA-D1-A17R 2 Out-of-Frame Inter-chr p15.2 q13.12 Transcription factor 15792 ChimerSeq FusionScan TCGA_RNA-Seq NEDD4L-ALPK2 NEDD4L chr18 55711940 + ALPK2 chr18 56196470 - Exonic hg19 UCEC TCGA-B5-A11L 2 Out-of-Frame Intra-chr q21.31 Tumor suppressor gene q21.32 Seq+ 15793 ChimerSeq FusionScan TCGA_RNA-Seq AGBL5-OST4 AGBL5 chr2 27293490 + OST4 chr2 27293589 - Exonic hg19 UCEC TCGA-B5-A11L 2 3'UTR-3'UTR Intra-chr p23.3 p23.3 15794 ChimerSeq FusionScan TCGA_RNA-Seq RPL27A-PARP14 RPL27A chr11 8705628 + PARP14 chr3 122446658 + Exonic hg19 UCEC TCGA-AX-A2H8 2 Out-of-Frame Inter-chr p15.4 q21.1 15795 ChimerSeq FusionScan TCGA_RNA-Seq LRBA-GTF2E2 LRBA chr4 151336589 - GTF2E2 chr8 30437913 - Exonic hg19 UCEC TCGA-PG-A6IB 2 Out-of-Frame Inter-chr q31.3 p12 15796 ChimerSeq FusionScan TCGA_RNA-Seq GPATCH8-FAM171A2 GPATCH8 chr17 42552196 - FAM171A2 chr17 42437500 - Exonic hg19 UCEC TCGA-D1-A0ZQ 2 Out-of-Frame Intra-chr q21.31 q21.31 15797 ChimerSeq FusionScan TCGA_RNA-Seq SERAC1-GTF2H5 SERAC1 chr6 158589171 - GTF2H5 chr6 158613008 + Exonic hg19 UCEC TCGA-DF-A2L0 2 5'UTR-CDS Intra-chr q25.3 q25.3 15798 ChimerSeq FusionScan TCGA_RNA-Seq ATG7-BCL2L13 ATG7 chr3 11350535 + BCL2L13 chr22 18178906 + Exonic hg19 UCEC TCGA-DF-A2L0 2 Out-of-Frame Inter-chr p25.3 q11.21 15799 ChimerSeq FusionScan TCGA_RNA-Seq SAMD4B-GMFG SAMD4B chr19 39844706 + GMFG chr19 39823766 - Exonic hg19 UCEC TCGA-EO-A3KU 4 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 15800 ChimerSeq FusionScan TCGA_RNA-Seq NDUFV2-TRIM5 NDUFV2 chr18 9126905 + TRIM5 chr11 5688941 - Exonic hg19 UCEC TCGA-EO-A3KU 2 Out-of-Frame Inter-chr p11.22 p15.4 Seq+ 15801 ChimerSeq FusionScan TCGA_RNA-Seq USP54-ANXA7 USP54 chr10 75331178 - ANXA7 chr10 75160615 - Exonic hg19 UCEC TCGA-B5-A5OE 3 CDS-5'UTR Intra-chr q22.2 q22.2 Tumor suppressor gene Seq+ 15802 ChimerSeq FusionScan TCGA_RNA-Seq RAD52-RIMKLB RAD52 chr12 1058767 - RIMKLB chr12 8925916 + Exonic hg19 UCEC TCGA-B5-A5OE 3 5'UTR-CDS Intra-chr p13.33 p13.31 Seq+ 15803 ChimerSeq FusionScan TCGA_RNA-Seq MED26-ZNF99 MED26 chr19 16738682 - ZNF99 chr19 22952126 - Exonic hg19 UCEC TCGA-B5-A5OE 2 In-Frame Intra-chr p13.11 p12 Transcription factor Seq+ 15804 ChimerSeq FusionScan TCGA_RNA-Seq ZNF823-SIPA1L3 ZNF823 chr19 11849631 - SIPA1L3 chr19 38519728 + Exonic hg19 UCEC TCGA-B5-A5OE 2 CDS-5'UTR Intra-chr p13.2 Transcription factor q13.13 Seq+ 15805 ChimerSeq FusionScan TCGA_RNA-Seq RIMKLB-SETD8 RIMKLB chr12 8906689 + SETD8 chr12 123875176 + Exonic hg19 UCEC TCGA-B5-A5OE 2 Out-of-Frame Intra-chr p13.31 Seq+ 15806 ChimerSeq FusionScan TCGA_RNA-Seq AKAP8L-NF2 AKAP8L chr19 15511604 - NF2 chr22 30067814 + Exonic hg19 UCEC TCGA-AX-A060 3 In-Frame Inter-chr p13.12 Transcription factor q12.2 Oncogene Tumor suppressor gene 15807 ChimerSeq FusionScan TCGA_RNA-Seq SMC5-RPS17L SMC5 chr9 72874179 + RPS17L chr15 83208883 - Exonic hg19 UCEC TCGA-AX-A060 2 Out-of-Frame Inter-chr q21.12 15808 ChimerSeq FusionScan TCGA_RNA-Seq DIS3L2-MICU1 DIS3L2 chr2 232826475 + MICU1 chr10 74326552 - Exonic hg19 UCEC TCGA-AJ-A2QM 7 5'UTR-5'UTR Inter-chr q37.1 q22.1 Seq+ 15809 ChimerSeq FusionScan TCGA_RNA-Seq RBFA-TXNL4A RBFA chr18 77797506 + TXNL4A chr18 77737701 - Exonic hg19 UCEC TCGA-AJ-A2QM 2 In-Frame Intra-chr q23 q23 Seq+ 15810 ChimerSeq FusionScan TCGA_RNA-Seq SREBF1-ZNF232 SREBF1 chr17 17740040 - ZNF232 chr17 5013163 - Exonic hg19 UCEC TCGA-AJ-A2QM 2 Out-of-Frame Intra-chr p11.2 Transcription factor p13.2 Transcription factor Seq+ 15811 ChimerSeq FusionScan TCGA_RNA-Seq DLG3-UNC5D DLG3 chrX 69699114 + UNC5D chr8 35606044 + Exonic hg19 UCEC TCGA-BK-A139 3 In-Frame Inter-chr q13.1 p12 Tumor suppressor gene Seq+ 15812 ChimerSeq FusionScan TCGA_RNA-Seq ATG9B-FAM120A ATG9B chr7 150712969 - FAM120A chr9 96238537 + Exonic hg19 UCEC TCGA-AP-A1DV 2 3'UTR-CDS Inter-chr q36.1 q22.31 15813 ChimerSeq FusionScan TCGA_RNA-Seq VPS11-ATP5L VPS11 chr11 118944661 + ATP5L chr11 118279714 + Exonic hg19 UCEC TCGA-AP-A05D 3 Out-of-Frame Intra-chr q23.3 15814 ChimerSeq FusionScan TCGA_RNA-Seq DNMT1-TMEM104 DNMT1 chr19 10305495 - TMEM104 chr17 72815888 + Exonic hg19 UCEC TCGA-AW-A1PO 2 Out-of-Frame Inter-chr p13.2 Oncogene Tumor suppressor gene Transcription factor q25.1 15815 ChimerSeq FusionScan TCGA_RNA-Seq NBAS-EEF1D NBAS chr2 15534350 - EEF1D chr8 144669022 - Exonic hg19 UCEC TCGA-AP-A0LE 2 In-Frame Inter-chr p24.3 15816 ChimerSeq FusionScan TCGA_RNA-Seq PPP1R13B-C14orf2 PPP1R13B chr14 104313635 - C14orf2 chr14 104381526 - Exonic hg19 UCEC TCGA-B5-A3S1 8 In-Frame Intra-chr q32.33 q32.33 Seq+ 15817 ChimerSeq FusionScan TCGA_RNA-Seq KIF9-GYG1 KIF9 chr3 47323984 - GYG1 chr3 148741839 + Exonic hg19 UCEC TCGA-B5-A3S1 4 5'UTR-CDS Intra-chr p21.31 q24 Seq+ 15818 ChimerSeq FusionScan TCGA_RNA-Seq NDUFS7-STK11 NDUFS7 chr19 1388592 + STK11 chr19 1222983 + Exonic hg19 UCEC TCGA-B5-A3S1 3 In-Frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Seq+ 15819 ChimerSeq FusionScan TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5399028 - RNF216 chr7 5765069 - Exonic hg19 UCEC TCGA-B5-A3S1 2 In-Frame Intra-chr p22.1 p22.1 Seq+ 15820 ChimerSeq FusionScan TCGA_RNA-Seq ST14-APLP2 ST14 chr11 130078579 + APLP2 chr11 130010292 + Exonic hg19 UCEC TCGA-B5-A3S1 2 In-Frame Intra-chr q24.3 q24.3 Seq+ 15821 ChimerSeq FusionScan TCGA_RNA-Seq UPF2-C10orf11 UPF2 chr10 12084753 - C10orf11 chr10 77795765 + Exonic hg19 UCEC TCGA-D1-A16N 2 5'UTR-CDS Intra-chr p14 15822 ChimerSeq FusionScan TCGA_RNA-Seq ATAD3B-HADHB ATAD3B chr1 1407469 + HADHB chr2 26486247 + Exonic hg19 UCEC TCGA-EY-A2OQ 2 In-Frame Inter-chr p36.33 p23.3 Seq+ 15823 ChimerSeq FusionScan TCGA_RNA-Seq TAOK1-CPD TAOK1 chr17 27718042 + CPD chr17 28747858 + Exonic hg19 UCEC TCGA-EY-A2OQ 2 5'UTR-CDS Intra-chr q11.2 q11.2 Tumor suppressor gene Seq+ 15824 ChimerSeq FusionScan TCGA_RNA-Seq CLIP2-NCF1 CLIP2 chr7 73778645 + NCF1 chr7 74193427 + Exonic hg19 UCEC TCGA-D1-A3DG 5 In-Frame Intra-chr q11.23 q11.23 15825 ChimerSeq FusionScan TCGA_RNA-Seq TMEM120B-ORAI1 TMEM120B chr12 122199644 + ORAI1 chr12 122078946 + Exonic hg19 UCEC TCGA-D1-A3DG 3 Out-of-Frame Intra-chr q24.31 q24.31 Seq+ 15826 ChimerSeq FusionScan TCGA_RNA-Seq MYH9-HSP90AA1 MYH9 chr22 36783851 - HSP90AA1 chr14 102550901 - Exonic hg19 UCEC TCGA-D1-A3DG 2 5'UTR-CDS Inter-chr q12.3 Oncogene Tumor suppressor gene q32.31 Oncogene Seq+ 15827 ChimerSeq FusionScan TCGA_RNA-Seq TRIP10-C1orf186 TRIP10 chr19 6750644 + C1orf186 chr1 206241676 - Exonic hg19 UCEC TCGA-D1-A3DG 2 In-Frame Inter-chr p13.3 q32.1 15828 ChimerSeq FusionScan TCGA_RNA-Seq STIM1-CLIP1 STIM1 chr11 3877639 + CLIP1 chr12 122773088 - Exonic hg19 UCEC TCGA-D1-A3DG 2 Out-of-Frame Inter-chr p15.4 q24.31 Seq+ 15829 ChimerSeq FusionScan TCGA_RNA-Seq CLIP2-NCF1 CLIP2 chr7 73787366 + NCF1 chr7 74193427 + Exonic hg19 UCEC TCGA-D1-A3DG 2 In-Frame Intra-chr q11.23 q11.23 15830 ChimerSeq FusionScan TCGA_RNA-Seq SECISBP2-GNAI3 SECISBP2 chr9 91934712 + GNAI3 chr1 110116358 + Exonic hg19 UCEC TCGA-D1-A3DG 2 Out-of-Frame Inter-chr q22.2 p13.3 15831 ChimerSeq FusionScan TCGA_RNA-Seq NFAT5-SNTB2 NFAT5 chr16 69600277 + SNTB2 chr16 69279504 + Exonic hg19 UCEC TCGA-B5-A0KB 3 In-Frame Intra-chr q22.1 Transcription factor Seq+ 15832 ChimerSeq FusionScan TCGA_RNA-Seq ARHGAP12-SLAMF6 ARHGAP12 chr10 32217610 - SLAMF6 chr1 160466183 - Exonic hg19 UCEC TCGA-B5-A0KB 2 5'UTR-CDS Inter-chr p11.22 q23.3 15833 ChimerSeq FusionScan TCGA_RNA-Seq CASZ1-EXOSC10 CASZ1 chr1 10856620 - EXOSC10 chr1 11131030 - Exonic hg19 UCEC TCGA-AX-A3G6 6 5'UTR-CDS Intra-chr p36.22 Transcription factor p36.22 Seq+ 15834 ChimerSeq FusionScan TCGA_RNA-Seq AGPAT3-PDE9A AGPAT3 chr21 45323900 + PDE9A chr21 44106301 + Exonic hg19 UCEC TCGA-AX-A3G6 2 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 15835 ChimerSeq FusionScan TCGA_RNA-Seq CCDC104-ACYP2 CCDC104 chr2 55761096 + ACYP2 chr2 54531824 + Exonic hg19 UCEC TCGA-AX-A3G6 2 In-Frame Intra-chr p16.2 Seq+ 15836 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 UCEC TCGA-AX-A3G6 2 Out-of-Frame Intra-chr q22.2 q22.2 15837 ChimerSeq FusionScan TCGA_RNA-Seq ACO1-ARL3 ACO1 chr9 32436395 + ARL3 chr10 104445758 - Exonic hg19 UCEC TCGA-D1-A175 2 In-Frame Inter-chr p21.1 q24.32 Seq+ 15838 ChimerSeq FusionScan TCGA_RNA-Seq PLEKHA2-KCNU1 PLEKHA2 chr8 38814904 + KCNU1 chr8 36663786 + Exonic hg19 UCEC TCGA-K6-A3WQ 2 In-Frame Intra-chr p11.22 p11.23 Seq+ 15839 ChimerSeq FusionScan TCGA_RNA-Seq DNAJC17-PPP1R14D DNAJC17 chr15 41099566 - PPP1R14D chr15 41108451 - Exonic hg19 UCEC TCGA-KP-A3W0 2 In-Frame Intra-chr q15.1 q15.1 Seq+ 15840 ChimerSeq FusionScan TCGA_RNA-Seq SARNP-PTGES3 SARNP chr12 56211449 - PTGES3 chr12 57065631 - Exonic hg19 UCEC TCGA-A5-A1OJ 15 In-Frame Intra-chr q13.2 q13.3 Seq+ 15841 ChimerSeq FusionScan TCGA_RNA-Seq RNF115-NOTCH2NL RNF115 chr1 145650540 + NOTCH2NL chr1 145281368 + Exonic hg19 UCEC TCGA-A5-A1OJ 4 Out-of-Frame Intra-chr q21.1 q21.1 Seq+ 15842 ChimerSeq FusionScan TCGA_RNA-Seq CNNM2-RBP4 CNNM2 chr10 104679858 + RBP4 chr10 95353792 - Exonic hg19 UCEC TCGA-A5-A1OJ 3 In-Frame Intra-chr q24.32 q23.33 Seq+ 15843 ChimerSeq FusionScan TCGA_RNA-Seq PPP2R4-PHYHD1 PPP2R4 chr9 131882889 + PHYHD1 chr9 131689316 + Exonic hg19 UCEC TCGA-A5-A1OJ 2 In-Frame Intra-chr Tumor suppressor gene q34.11 Seq+ 15844 ChimerSeq FusionScan TCGA_RNA-Seq SARNP-PTGES3 SARNP chr12 56211449 - PTGES3 chr12 57064148 - Exonic hg19 UCEC TCGA-A5-A1OJ 2 In-Frame Intra-chr q13.2 q13.3 Seq+ 15845 ChimerSeq FusionScan TCGA_RNA-Seq SPRED3-RFXANK SPRED3 chr19 38885116 + RFXANK chr19 19304747 + Exonic hg19 UCEC TCGA-A5-A1OJ 2 3'UTR-5'UTR Intra-chr q13.2 p13.11 15846 ChimerSeq FusionScan TCGA_RNA-Seq ZNF790-ATP4A ZNF790 chr19 37340903 - ATP4A chr19 36044084 - Exonic hg19 UCEC TCGA-A5-A1OH 9 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.12 Seq+ 15847 ChimerSeq FusionScan TCGA_RNA-Seq TBC1D15-TRHDE TBC1D15 chr12 72300918 + TRHDE chr12 72680460 + Exonic hg19 UCEC TCGA-A5-A1OH 2 Out-of-Frame Intra-chr q21.1 q21.1 Seq+ 15848 ChimerSeq FusionScan TCGA_RNA-Seq CRIM1-LRPPRC CRIM1 chr2 36583766 + LRPPRC chr2 44145537 - Exonic hg19 UCEC TCGA-A5-A1OH 2 In-Frame Intra-chr p22.2 p21 15849 ChimerSeq FusionScan TCGA_RNA-Seq CBFA2T2-BPIFA2 CBFA2T2 chr20 32078107 + BPIFA2 chr20 31756936 + Exonic hg19 UCEC TCGA-A5-A1OH 2 CDS-5'UTR Intra-chr q11.21 q11.21 15850 ChimerSeq FusionScan TCGA_RNA-Seq AGAP1-PACRG AGAP1 chr2 236792093 + PACRG chr6 163735858 + Exonic hg19 UCEC TCGA-A5-A1OH 2 Out-of-Frame Inter-chr q37.2 q26 Tumor suppressor gene Seq+ 15851 ChimerSeq FusionScan TCGA_RNA-Seq SNX19-RRP12 SNX19 chr11 130784160 - RRP12 chr10 99130553 - Exonic hg19 UCEC TCGA-A5-A1OH 2 In-Frame Inter-chr q25 q24.1 Seq+ 15852 ChimerSeq FusionScan TCGA_RNA-Seq EEF1G-BSCL2 EEF1G chr11 62334277 - BSCL2 chr11 62462183 - Exonic hg19 UCEC TCGA-2E-A9G8 7 Out-of-Frame Intra-chr q12.3 q12.3 Seq+ 15853 ChimerSeq FusionScan TCGA_RNA-Seq MGC2752-CHMP2A MGC2752 chr19 59086955 + CHMP2A chr19 59063805 - Exonic hg19 UCEC TCGA-B5-A11I 2 5'UTR-CDS Intra-chr q13.43 15854 ChimerSeq FusionScan TCGA_RNA-Seq SMPD4-SAP130 SMPD4 chr2 130932486 - SAP130 chr2 128712918 - Exonic hg19 UCEC TCGA-A5-A0GE 2 Out-of-Frame Intra-chr q21.1 q14.3 15855 ChimerSeq FusionScan TCGA_RNA-Seq TTC3-THADA TTC3 chr21 38512973 + THADA chr2 43571376 - Exonic hg19 UCEC TCGA-A5-A0GE 2 Out-of-Frame Inter-chr q22.13 p21 Seq+ 15856 ChimerSeq FusionScan TCGA_RNA-Seq IREB2-ST20 IREB2 chr15 78732223 + ST20 chr15 80191467 - Exonic hg19 UCEC TCGA-AX-A3G8 2 Out-of-Frame Intra-chr q25.1 q25.1 Tumor suppressor gene 15857 ChimerSeq FusionScan TCGA_RNA-Seq MATR3-UBE2D2 MATR3 chr5 138655190 + UBE2D2 chr5 138979956 + Exonic hg19 UCEC TCGA-FI-A2EU 3 In-Frame Intra-chr q31.2 q31.2 Seq+ 15858 ChimerSeq FusionScan TCGA_RNA-Seq TAOK1-PIPOX TAOK1 chr17 27718042 + PIPOX chr17 27371876 + Exonic hg19 UCEC TCGA-FI-A2EU 3 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 15859 ChimerSeq FusionScan TCGA_RNA-Seq GRK6-FAF2 GRK6 chr5 176853898 + FAF2 chr5 175913355 + Exonic hg19 UCEC TCGA-FI-A2EU 2 Out-of-Frame Intra-chr q35.3 q35.2 Seq+ 15860 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC2-KIAA1468 ZCCHC2 chr18 60232329 + KIAA1468 chr18 59936101 + Exonic hg19 UCEC TCGA-FI-A2EU 2 In-Frame Intra-chr q21.33 q21.33 15861 ChimerSeq FusionScan TCGA_RNA-Seq CNPY2-RPLP0 CNPY2 chr12 56708634 - RPLP0 chr12 120635265 - Exonic hg19 UCEC TCGA-EO-A3AV 2 In-Frame Intra-chr q13.3 q24.23 15862 ChimerSeq FusionScan TCGA_RNA-Seq ARID3A-MORC2 ARID3A chr19 929896 + MORC2 chr22 31328756 - Exonic hg19 UCEC TCGA-EY-A2ON 5 In-Frame Inter-chr p13.3 Transcription factor q12.2 Seq+ 15863 ChimerSeq FusionScan TCGA_RNA-Seq RASAL1-DDX54 RASAL1 chr12 113553738 - DDX54 chr12 113596917 - Exonic hg19 UCEC TCGA-EY-A2ON 2 Out-of-Frame Intra-chr q24.13 Tumor suppressor gene q24.13 Seq+ 15864 ChimerSeq FusionScan TCGA_RNA-Seq CELSR1-KCNJ4 CELSR1 chr22 46787082 - KCNJ4 chr22 38824176 - Exonic hg19 UCEC TCGA-D1-A162 4 CDS-5'UTR Intra-chr q13.31 q13.1 Seq+ 15865 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-ACVRL1 PTPN12 chr7 77166962 + ACVRL1 chr12 52306253 + Exonic hg19 UCEC TCGA-D1-A162 2 CDS-5'UTR Inter-chr q11.23 Tumor suppressor gene q13.13 Oncogene Seq+ 15866 ChimerSeq FusionScan TCGA_RNA-Seq KPNA4-IFT80 KPNA4 chr3 160248642 - IFT80 chr3 160102434 - Exonic hg19 UCEC TCGA-FI-A2CY 2 CDS-5'UTR Intra-chr q25.33 q25.33 Seq+ 15867 ChimerSeq FusionScan TCGA_RNA-Seq TNFRSF10B-C20orf111 TNFRSF10B chr8 22926263 - C20orf111 chr20 42826379 - Exonic hg19 UCEC TCGA-FI-A2CY 2 Out-of-Frame Inter-chr p21.3 Tumor suppressor gene 15868 ChimerSeq FusionScan TCGA_RNA-Seq IKBKG-ATP2B3 IKBKG chrX 153775960 + ATP2B3 chrX 152806816 + Exonic hg19 UCEC TCGA-FI-A2CY 2 5'UTR-CDS Intra-chr q28 q28 Seq+ 15869 ChimerSeq FusionScan TCGA_RNA-Seq IST1-DHX38 IST1 chr16 71929492 + DHX38 chr16 72130037 + Exonic hg19 UCEC TCGA-A5-A0G5 4 5'UTR-5'UTR Intra-chr q22.2 q22.2 Seq+ 15870 ChimerSeq FusionScan TCGA_RNA-Seq CTCF-NUTF2 CTCF chr16 67605167 + NUTF2 chr16 67899004 + Exonic hg19 UCEC TCGA-A5-A0G5 4 5'UTR-5'UTR Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 Seq+ 15871 ChimerSeq FusionScan TCGA_RNA-Seq NDUFA8-RBM18 NDUFA8 chr9 124914523 - RBM18 chr9 125014252 - Exonic hg19 UCEC TCGA-A5-A0G5 2 In-Frame Intra-chr q33.2 q33.2 15872 ChimerSeq FusionScan TCGA_RNA-Seq RHEB-CRYGN RHEB chr7 151216545 - CRYGN chr7 151135330 - Exonic hg19 UCEC TCGA-A5-A0G5 2 Out-of-Frame Intra-chr q36.1 Oncogene q36.1 15873 ChimerSeq FusionScan TCGA_RNA-Seq ILF3-DNM2 ILF3 chr19 10782211 + DNM2 chr19 10909161 + Exonic hg19 UCEC TCGA-A5-A0G5 2 In-Frame Intra-chr p13.2 p13.2 Seq+ 15874 ChimerSeq FusionScan TCGA_RNA-Seq MICALL1-IFT122 MICALL1 chr22 38329119 + IFT122 chr3 129236311 + Exonic hg19 UCEC TCGA-A5-A0G5 2 In-Frame Inter-chr q13.1 q21.3 Seq+ 15875 ChimerSeq FusionScan TCGA_RNA-Seq RYK-ZFAND3 RYK chr3 133921573 - ZFAND3 chr6 38120010 + Exonic hg19 UCEC TCGA-A5-A0G5 2 Out-of-Frame Inter-chr q22.2 TK:Ryk p21.2 Seq+ 15876 ChimerSeq FusionScan TCGA_RNA-Seq ERCC6-MICU1 ERCC6 chr10 50747007 - MICU1 chr10 74183129 - Exonic hg19 UCEC TCGA-AP-A052 2 5'UTR-CDS Intra-chr q11.23 q22.1 15877 ChimerSeq FusionScan TCGA_RNA-Seq GABPA-JAM2 GABPA chr21 27113986 + JAM2 chr21 27078290 + Exonic hg19 UCEC TCGA-AJ-A3QS 4 Out-of-Frame Intra-chr q21.3 Transcription factor q21.3 Seq+ 15878 ChimerSeq FusionScan TCGA_RNA-Seq FAM60A-PLEKHA5 FAM60A chr12 31478957 - PLEKHA5 chr12 19473495 + Exonic hg19 UCEC TCGA-AJ-A3QS 2 5'UTR-CDS Intra-chr p12.3 Seq+ 15879 ChimerSeq FusionScan TCGA_RNA-Seq ITGB5-SLC12A8 ITGB5 chr3 124605777 - SLC12A8 chr3 124839530 - Exonic hg19 UCEC TCGA-AJ-A3QS 2 In-Frame Intra-chr q21.2 q21.2 Seq+ 15880 ChimerSeq FusionScan TCGA_RNA-Seq KIAA1737-C14orf166B KIAA1737 chr14 77564704 + C14orf166B chr14 77318707 + Exonic hg19 UCEC TCGA-BK-A139 4 5'UTR-CDS Intra-chr Seq+ 15881 ChimerSeq FusionScan TCGA_RNA-Seq SMARCC1-MAP4 SMARCC1 chr3 47730876 - MAP4 chr3 47919013 - Exonic hg19 UCEC TCGA-BK-A139 2 Out-of-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 15882 ChimerSeq FusionScan TCGA_RNA-Seq PKN1-POLA2 PKN1 chr19 14544354 + POLA2 chr11 65062016 + Exonic hg19 UCEC TCGA-BK-A139 2 In-Frame Inter-chr p13.12 AGC:PKN q13.1 Seq+ 15883 ChimerSeq FusionScan TCGA_RNA-Seq FAM172A-FLJ42709 FAM172A chr5 93386435 - FLJ42709 chr5 92747215 - Exonic hg19 UCEC TCGA-BK-A0CC 3 CDS-3'UTR Intra-chr q15 Tumor suppressor gene Seq+ 15884 ChimerSeq FusionScan TCGA_RNA-Seq SHROOM4-ARID3A SHROOM4 chrX 50556901 - ARID3A chr19 960091 + Exonic hg19 UCEC TCGA-BK-A0CC 2 In-Frame Inter-chr p11.22 p13.3 Transcription factor Seq+ 15885 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-PHTF2 PTPN12 chr7 77236618 + PHTF2 chr7 77469537 + Exonic hg19 UCEC TCGA-BK-A0CC 2 CDS-5'UTR Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 15886 ChimerSeq FusionScan TCGA_RNA-Seq FKBP4-CUEDC1 FKBP4 chr12 2904410 + CUEDC1 chr17 55943905 - Exonic hg19 UCEC TCGA-BG-A0MU 2 Out-of-Frame Inter-chr p13.33 q22 15887 ChimerSeq FusionScan TCGA_RNA-Seq PCBP2-LINC00592 PCBP2 chr12 53849785 + LINC00592 chr12 52617229 + Exonic hg19 UCEC TCGA-AP-A05A 15 CDS-5'UTR Intra-chr q13.13 q13.13 Seq+ 15888 ChimerSeq FusionScan TCGA_RNA-Seq FRYL-TXK FRYL chr4 48686689 - TXK chr4 48114529 - Exonic hg19 UCEC TCGA-D1-A1O0 3 5'UTR-CDS Intra-chr p11 p12 TK:Tec Seq+ 15889 ChimerSeq FusionScan TCGA_RNA-Seq MPP5-RAD51B MPP5 chr14 67784196 + RAD51B chr14 68878140 + Exonic hg19 UCEC TCGA-D1-A1O0 3 In-Frame Intra-chr q23.3 q24.1 Seq+ 15890 ChimerSeq FusionScan TCGA_RNA-Seq SGPP2-TEN1 SGPP2 chr2 223289540 + TEN1 chr17 73982267 + Exonic hg19 UCEC TCGA-AJ-A3I9 3 CDS-5'UTR Inter-chr q36.1 q25.1 Seq+ 15891 ChimerSeq FusionScan TCGA_RNA-Seq ERBB3-COX4I2 ERBB3 chr12 56474166 + COX4I2 chr20 30231206 + Exonic hg19 UCEC TCGA-AJ-A3I9 3 In-Frame Inter-chr q13.2 Oncogene q11.21 Seq+ 15892 ChimerSeq FusionScan TCGA_RNA-Seq GADD45GIP1-CSTF1 GADD45GIP1 chr19 13067676 - CSTF1 chr20 54978523 + Exonic hg19 UCEC TCGA-D1-A17K 25 Out-of-Frame Inter-chr p13.13 Tumor suppressor gene q13.2 Seq+ 15893 ChimerSeq FusionScan TCGA_RNA-Seq FMNL2-GPBAR1 FMNL2 chr2 153437563 + GPBAR1 chr2 219127402 + Exonic hg19 UCEC TCGA-D1-A17K 5 CDS-5'UTR Intra-chr q23.3 q35 Seq+ 15894 ChimerSeq FusionScan TCGA_RNA-Seq OTUB1-AHNAK OTUB1 chr11 63753986 + AHNAK chr11 62259303 - Exonic hg19 UCEC TCGA-FI-A2F8 9 Out-of-Frame Intra-chr q13.1 q12.3 Tumor suppressor gene Seq+ 15895 ChimerSeq FusionScan TCGA_RNA-Seq TMEM123-MMP27 TMEM123 chr11 102319542 - MMP27 chr11 102567222 - Exonic hg19 UCEC TCGA-FI-A2F8 3 In-Frame Intra-chr q22.2 q22.2 Seq+ 15896 ChimerSeq FusionScan TCGA_RNA-Seq ERBB2-PGAP3 ERBB2 chr17 37866734 + PGAP3 chr17 37842272 - Exonic hg19 UCEC TCGA-FI-A2F8 2 In-Frame Intra-chr q12 Oncogene q12 Oncogene Seq+ 15897 ChimerSeq FusionScan TCGA_RNA-Seq TYMS-DYNC2H1 TYMS chr18 662320 + DYNC2H1 chr11 103228970 + Exonic hg19 UCEC TCGA-KJ-A3U4 2 3'UTR-CDS Inter-chr p11.32 q22.3 15898 ChimerSeq FusionScan TCGA_RNA-Seq GPBP1-FOLR1 GPBP1 chr5 56472227 + FOLR1 chr11 71906314 + Exonic hg19 UCEC TCGA-EO-A2CG 5 5'UTR-CDS Inter-chr q11.2 Transcription factor q13.4 Seq+ 15899 ChimerSeq FusionScan TCGA_RNA-Seq AURKB-ZNF277 AURKB chr17 8113494 - ZNF277 chr7 111926927 + Exonic hg19 UCEC TCGA-EO-A2CG 2 Out-of-Frame Inter-chr p13.1 Oncogene q31.1 Transcription factor 15900 ChimerSeq FusionScan TCGA_RNA-Seq DNM2-AP1M2 DNM2 chr19 10829079 + AP1M2 chr19 10694746 - Exonic hg19 UCEC TCGA-EO-A2CG 2 Out-of-Frame Intra-chr p13.2 p13.2 Seq+ 15901 ChimerSeq FusionScan TCGA_RNA-Seq BCAR3-ABCA4 BCAR3 chr1 94054533 - ABCA4 chr1 94495187 - Exonic hg19 UCEC TCGA-AJ-A3EJ 5 In-Frame Intra-chr p22.1 p22.1 Seq+ 15902 ChimerSeq FusionScan TCGA_RNA-Seq WWP2-NHP2L1 WWP2 chr16 69876023 + NHP2L1 chr22 42076368 - Exonic hg19 UCEC TCGA-AJ-A3EJ 2 Out-of-Frame Inter-chr q22.1 Seq+ 15903 ChimerSeq FusionScan TCGA_RNA-Seq CSNK1D-SECTM1 CSNK1D chr17 80231181 - SECTM1 chr17 80280246 - Exonic hg19 UCEC TCGA-AJ-A3EJ 2 Out-of-Frame Intra-chr q25.3 q25.3 Seq+ 15904 ChimerSeq FusionScan TCGA_RNA-Seq STAG1-FAM168A STAG1 chr3 136471036 - FAM168A chr11 73179537 - Exonic hg19 UCEC TCGA-BG-A3PP 3 5'UTR-5'UTR Inter-chr q22.3 q13.4 Seq+ 15905 ChimerSeq FusionScan TCGA_RNA-Seq VAX2-PAIP2B VAX2 chr2 71127998 + PAIP2B chr2 71429730 - Exonic hg19 UCEC TCGA-BG-A3PP 2 CDS-5'UTR Intra-chr p13.3 Transcription factor p13.3 Seq+ 15906 ChimerSeq FusionScan TCGA_RNA-Seq RAB5C-TIMP2 RAB5C chr17 40306910 - TIMP2 chr17 76867088 - Exonic hg19 UCEC TCGA-B5-A1N2 5 5'UTR-CDS Intra-chr q21.2 q25.3 Seq+ 15907 ChimerSeq FusionScan TCGA_RNA-Seq SMURF2-PVRL2 SMURF2 chr17 62657946 - PVRL2 chr19 45385467 + Exonic hg19 UCEC TCGA-B5-A1N2 4 In-Frame Inter-chr q24.1 Seq+ 15908 ChimerSeq FusionScan TCGA_RNA-Seq CLPTM1-ZNF570 CLPTM1 chr19 45480717 + ZNF570 chr19 37974780 + Exonic hg19 UCEC TCGA-B5-A1N2 2 In-Frame Intra-chr q13.32 q13.12 Transcription factor Seq+ 15909 ChimerSeq FusionScan TCGA_RNA-Seq RASA4-POLR2J3 RASA4 chr7 102246304 - POLR2J3 chr7 102180538 - Exonic hg19 UCEC TCGA-B5-A1N2 2 CDS-3'UTR Intra-chr q22.1 q22.1 15910 ChimerSeq FusionScan TCGA_RNA-Seq VRK3-CBLC VRK3 chr19 50504046 - CBLC chr19 45296730 + Exonic hg19 UCEC TCGA-B5-A1N2 2 In-Frame Intra-chr q13.33 CK1:VRK q13.32 Seq+ 15911 ChimerSeq FusionScan TCGA_RNA-Seq KIRREL-C1orf49 KIRREL chr1 158047930 + C1orf49 chr1 178489506 + Exonic hg19 UCEC TCGA-B5-A1N2 2 Out-of-Frame Intra-chr q23.1 15912 ChimerSeq FusionScan TCGA_RNA-Seq PACS1-CCDC51 PACS1 chr11 65838313 + CCDC51 chr3 48476425 - Exonic hg19 UCEC TCGA-B5-A1MX 2 CDS-5'UTR Inter-chr q13.1 p21.31 15913 ChimerSeq FusionScan TCGA_RNA-Seq G3BP1-LMNB1 G3BP1 chr5 151151597 + LMNB1 chr5 126140467 + Exonic hg19 UCEC TCGA-AX-A3GI 3 5'UTR-5'UTR Intra-chr q33.1 q23.2 Seq+ 15914 ChimerSeq FusionScan TCGA_RNA-Seq ATXN10-PGR ATXN10 chr22 46136418 + PGR chr11 100962607 - Exonic hg19 UCEC TCGA-AX-A3GI 3 Out-of-Frame Inter-chr q13.31 q22.1 Tumor suppressor gene Transcription factor Seq+ 15915 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD17-PAK1 ANKRD17 chr4 74123992 - PAK1 chr11 77070062 - Exonic hg19 UCEC TCGA-D1-A17C 2 In-Frame Inter-chr q13.3 q14.1 STE:STE20 15916 ChimerSeq FusionScan TCGA_RNA-Seq FUS-GBAS FUS chr16 31196500 + GBAS chr7 56062586 + Exonic hg19 UCEC TCGA-AP-A1DH 2 In-Frame Inter-chr p11.2 Tumor suppressor gene 15917 ChimerSeq FusionScan TCGA_RNA-Seq FGFR2-KIAA1598 FGFR2 chr10 123243211 - KIAA1598 chr10 118708508 - Exonic hg19 UCEC TCGA-5B-A90C 10 In-Frame Intra-chr q26.13 TK:FGFR Oncogene Seq+ 15918 ChimerSeq FusionScan TCGA_RNA-Seq ARHGEF2-PAQR6 ARHGEF2 chr1 155935093 - PAQR6 chr1 156214194 - Exonic hg19 UCEC TCGA-5B-A90C 6 In-Frame Intra-chr q22 q22 Seq+ 15919 ChimerSeq FusionScan TCGA_RNA-Seq ZMIZ1-C10orf11 ZMIZ1 chr10 80878781 + C10orf11 chr10 77795765 + Exonic hg19 UCEC TCGA-5B-A90C 5 5'UTR-CDS Intra-chr q22.3 Seq+ 15920 ChimerSeq FusionScan TCGA_RNA-Seq WDHD1-DLGAP5 WDHD1 chr14 55493428 - DLGAP5 chr14 55621524 - Exonic hg19 UCEC TCGA-5B-A90C 5 Out-of-Frame Intra-chr q22.3 q22.3 Seq+ 15921 ChimerSeq FusionScan TCGA_RNA-Seq MED1-GSDMB MED1 chr17 37575969 - GSDMB chr17 38062524 - Exonic hg19 UCEC TCGA-5B-A90C 5 In-Frame Intra-chr q12 Tumor suppressor gene q21.1 Seq+ 15922 ChimerSeq FusionScan TCGA_RNA-Seq RQCD1-ARPC2 RQCD1 chr2 219433701 + ARPC2 chr2 219103386 + Exonic hg19 UCEC TCGA-5B-A90C 4 Out-of-Frame Intra-chr q35 Seq+ 15923 ChimerSeq FusionScan TCGA_RNA-Seq NR2F6-PLVAP NR2F6 chr19 17351479 - PLVAP chr19 17477004 - Exonic hg19 UCEC TCGA-5B-A90C 2 Out-of-Frame Intra-chr p13.11 Transcription factor p13.11 Seq+ 15924 ChimerSeq FusionScan TCGA_RNA-Seq GBF1-SFTPD GBF1 chr10 104005538 + SFTPD chr10 81700544 - Exonic hg19 UCEC TCGA-5B-A90C 2 5'UTR-CDS Intra-chr q24.32 q22.3 Seq+ 15925 ChimerSeq FusionScan TCGA_RNA-Seq CBWD2-TDP1 CBWD2 chr2 114212355 + TDP1 chr14 90485659 + Exonic hg19 UCEC TCGA-AP-A05H 2 Out-of-Frame Inter-chr q14.1 q32.11 Seq+ 15926 ChimerSeq FusionScan TCGA_RNA-Seq WDR59-CFDP1 WDR59 chr16 75018861 - CFDP1 chr16 75339080 - Exonic hg19 UCEC TCGA-AX-A3G7 2 Out-of-Frame Intra-chr q23.1 q23.1 Seq+ 15927 ChimerSeq FusionScan TCGA_RNA-Seq ALCAM-PARN ALCAM chr3 105086325 + PARN chr16 14576684 - Exonic hg19 UCEC TCGA-B5-A11N 2 In-Frame Inter-chr q13.11 15928 ChimerSeq FusionScan TCGA_RNA-Seq DPYD-TNIK DPYD chr1 98144650 - TNIK chr3 170885059 - Exonic hg19 UCEC TCGA-B5-A11N 2 Out-of-Frame Inter-chr p21.3 Oncogene q26.31 STE:STE20 15929 ChimerSeq FusionScan TCGA_RNA-Seq CES3-ATP5C1 CES3 chr16 66995292 + ATP5C1 chr10 7844232 + Exonic hg19 UCEC TCGA-B5-A11N 2 In-Frame Inter-chr q22.1 p14 15930 ChimerSeq FusionScan TCGA_RNA-Seq ZFX-PDK3 ZFX chrX 24197887 + PDK3 chrX 24557250 + Exonic hg19 UCEC TCGA-B5-A11N 2 Out-of-Frame Intra-chr p22.11 Transcription factor p22.11 15931 ChimerSeq FusionScan TCGA_RNA-Seq DYRK2-SEC31A DYRK2 chr12 68043725 + SEC31A chr4 83750211 - Exonic hg19 UCEC TCGA-B5-A11N 2 Out-of-Frame Inter-chr q15 CMGC:DYRK q21.22 15932 ChimerSeq FusionScan TCGA_RNA-Seq CPD-GRAP2 CPD chr17 28712254 + GRAP2 chr22 40351822 + Exonic hg19 UCEC TCGA-B5-A11N 2 Out-of-Frame Inter-chr q11.2 Tumor suppressor gene q13.1 15933 ChimerSeq FusionScan TCGA_RNA-Seq GDPD5-WNT11 GDPD5 chr11 75153407 - WNT11 chr11 75905888 - Exonic hg19 UCEC TCGA-EY-A1GS 2 Out-of-Frame Intra-chr q13.5 q13.5 Tumor suppressor gene Seq+ 15934 ChimerSeq FusionScan TCGA_RNA-Seq C11orf49-MAEA C11orf49 chr11 46958402 + MAEA chr4 1330648 + Exonic hg19 UCEC TCGA-AX-A0IU 6 Out-of-Frame Inter-chr p11.2 p16.3 15935 ChimerSeq FusionScan TCGA_RNA-Seq APIP-ACTG2 APIP chr11 34937774 - ACTG2 chr2 74135799 + Exonic hg19 UCEC TCGA-AX-A0IU 5 In-Frame Inter-chr p13 p13.1 Seq+ 15936 ChimerSeq FusionScan TCGA_RNA-Seq CUTA-GRM4 CUTA chr6 33384873 - GRM4 chr6 33990647 - Exonic hg19 UCEC TCGA-DI-A1NN 3 5'UTR-CDS Intra-chr p21.31 Seq+ 15937 ChimerSeq FusionScan TCGA_RNA-Seq PHC2-NLRP4 PHC2 chr1 33815197 - NLRP4 chr19 56382192 + Exonic hg19 UCEC TCGA-DF-A2KR 7 5'UTR-CDS Inter-chr p35.1 q13.43 Seq+ 15938 ChimerSeq FusionScan TCGA_RNA-Seq KIF13B-EYA2 KIF13B chr8 28950261 - EYA2 chr20 45771697 + Exonic hg19 UCEC TCGA-DF-A2KR 6 In-Frame Inter-chr p12 q13.12 Seq+ 15939 ChimerSeq FusionScan TCGA_RNA-Seq CDC42EP4-COMMD1 CDC42EP4 chr17 71308031 - COMMD1 chr2 62227835 + Exonic hg19 UCEC TCGA-DF-A2KR 4 5'UTR-CDS Inter-chr q25.1 p15 Seq+ 15940 ChimerSeq FusionScan TCGA_RNA-Seq NOS1AP-ATF6 NOS1AP chr1 162040072 + ATF6 chr1 161928235 + Exonic hg19 UCEC TCGA-DF-A2KR 3 Out-of-Frame Intra-chr q23.3 q23.3 Transcription factor Seq+ 15941 ChimerSeq FusionScan TCGA_RNA-Seq SRP68-MIEN1 SRP68 chr17 74063297 - MIEN1 chr17 37886544 - Exonic hg19 UCEC TCGA-EY-A1GC 8 In-Frame Intra-chr q25.1 q12 15942 ChimerSeq FusionScan TCGA_RNA-Seq BICD1-METTL20 BICD1 chr12 32459056 + METTL20 chr12 31814774 + Exonic hg19 UCEC TCGA-EY-A1GC 3 CDS-5'UTR Intra-chr p11.21 Seq+ 15943 ChimerSeq FusionScan TCGA_RNA-Seq PSME3-BECN1 PSME3 chr17 40989714 + BECN1 chr17 40975897 - Exonic hg19 UCEC TCGA-EY-A1GC 2 CDS-5'UTR Intra-chr q21.31 q21.31 Tumor suppressor gene Seq+ 15944 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-NFX1 RCC1 chr1 28834672 + NFX1 chr9 33364007 + Exonic hg19 UCEC TCGA-EY-A1GC 2 5'UTR-CDS Inter-chr p35.3 p13.3 Transcription factor 15945 ChimerSeq FusionScan TCGA_RNA-Seq KIF3B-TM9SF4 KIF3B chr20 30865568 + TM9SF4 chr20 30737436 + Exonic hg19 UCEC TCGA-EY-A54A 2 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 15946 ChimerSeq FusionScan TCGA_RNA-Seq P4HB-PCYT2 P4HB chr17 79817056 - PCYT2 chr17 79864774 - Exonic hg19 UCEC TCGA-B5-A11J 7 Out-of-Frame Intra-chr q25.3 q25.3 Seq+ 15947 ChimerSeq FusionScan TCGA_RNA-Seq MTMR3-NF2 MTMR3 chr22 30279348 + NF2 chr22 30067814 + Exonic hg19 UCEC TCGA-B5-A11J 6 5'UTR-CDS Intra-chr q12.2 q12.2 Oncogene Tumor suppressor gene Seq+ 15948 ChimerSeq FusionScan TCGA_RNA-Seq MECOM-LRRC34 MECOM chr3 169381123 - LRRC34 chr3 169526533 - Exonic hg19 UCEC TCGA-B5-A11J 5 In-Frame Intra-chr q26.2 Transcription factor q26.2 Seq+ 15949 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD33B-ADAMTS16 ANKRD33B chr5 10564945 + ADAMTS16 chr5 5232480 + Exonic hg19 UCEC TCGA-B5-A11J 3 In-Frame Intra-chr p15.2 p15.32 Seq+ 15950 ChimerSeq FusionScan TCGA_RNA-Seq EPB41L1-ROMO1 EPB41L1 chr20 34785963 + ROMO1 chr20 34287554 + Exonic hg19 UCEC TCGA-B5-A11J 3 CDS-5'UTR Intra-chr q11.23 q11.22 Seq+ 15951 ChimerSeq FusionScan TCGA_RNA-Seq WWP2-TMCO7 WWP2 chr16 69820983 + TMCO7 chr16 69007930 + Exonic hg19 UCEC TCGA-B5-A11J 3 In-Frame Intra-chr q22.1 Seq+ 15952 ChimerSeq FusionScan TCGA_RNA-Seq SLC39A11-LINC00469 SLC39A11 chr17 70943869 - LINC00469 chr17 71757165 - Exonic hg19 UCEC TCGA-B5-A11J 2 CDS-3'UTR Intra-chr q25.1 q25.1 15953 ChimerSeq FusionScan TCGA_RNA-Seq ASH1L-C1orf85 ASH1L chr1 155365249 - C1orf85 chr1 156264356 - Exonic hg19 UCEC TCGA-B5-A11J 2 Out-of-Frame Intra-chr q22 Transcription factor 15954 ChimerSeq FusionScan TCGA_RNA-Seq ST5-SBF2 ST5 chr11 8772167 - SBF2 chr11 9817504 - Exonic hg19 UCEC TCGA-B5-A11J 2 Out-of-Frame Intra-chr p15.4 Tumor suppressor gene p15.4 15955 ChimerSeq FusionScan TCGA_RNA-Seq FRG1-RABGEF1 FRG1 chr4 190864427 + RABGEF1 chr7 66273872 + Exonic hg19 UCEC TCGA-B5-A11J 2 Out-of-Frame Inter-chr q11.21 15956 ChimerSeq FusionScan TCGA_RNA-Seq SS18-CHST9 SS18 chr18 23619252 - CHST9 chr18 24524330 - Exonic hg19 UCEC TCGA-B5-A11J 2 In-Frame Intra-chr q11.2 q11.2 Seq+ 15957 ChimerSeq FusionScan TCGA_RNA-Seq TMEM179B-SCGB1D1 TMEM179B chr11 62554999 + SCGB1D1 chr11 61959527 + Exonic hg19 UCEC TCGA-B5-A11J 2 Out-of-Frame Intra-chr q12.3 q12.3 Seq+ 15958 ChimerSeq FusionScan TCGA_RNA-Seq NR6A1-GOLGA1 NR6A1 chr9 127495586 - GOLGA1 chr9 127662826 - Exonic hg19 UCEC TCGA-B5-A11J 2 Out-of-Frame Intra-chr q33.3 Transcription factor q33.3 Seq+ 15959 ChimerSeq FusionScan TCGA_RNA-Seq RAD51B-MPP5 RAD51B chr14 68353921 + MPP5 chr14 67770238 + Exonic hg19 UCEC TCGA-B5-A11J 2 In-Frame Intra-chr q24.1 q23.3 15960 ChimerSeq FusionScan TCGA_RNA-Seq FAM222B-SEZ6 FAM222B chr17 27161310 - SEZ6 chr17 27306831 - Exonic hg19 UCEC TCGA-B5-A11J 2 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 15961 ChimerSeq FusionScan TCGA_RNA-Seq MKRN2-LSM3 MKRN2 chr3 12598675 + LSM3 chr3 14239535 + Exonic hg19 UCEC TCGA-A5-A0VO 2 Out-of-Frame Intra-chr p25.2 p25.1 15962 ChimerSeq FusionScan TCGA_RNA-Seq ERI3-EIF2B3 ERI3 chr1 44818521 - EIF2B3 chr1 45392411 - Exonic hg19 UCEC TCGA-JU-AAVI 3 In-Frame Intra-chr p34.1 p34.1 Seq+ 15963 ChimerSeq FusionScan TCGA_RNA-Seq PAIP2-SIL1 PAIP2 chr5 138677669 + SIL1 chr5 138463542 - Exonic hg19 UCEC TCGA-AJ-A3OL 2 5'UTR-5'UTR Intra-chr q31.2 Tumor suppressor gene q31.2 Seq+ 15964 ChimerSeq FusionScan TCGA_RNA-Seq PTPLAD1-URM1 PTPLAD1 chr15 65851069 + URM1 chr9 131150094 + Exonic hg19 UCEC TCGA-EY-A210 6 In-Frame Inter-chr q34.11 Seq+ 15965 ChimerSeq FusionScan TCGA_RNA-Seq MYO9A-GRB2 MYO9A chr15 72410020 - GRB2 chr17 73328878 - Exonic hg19 UCEC TCGA-EY-A210 2 5'UTR-CDS Inter-chr q23 q25.1 Seq+ 15966 ChimerSeq FusionScan TCGA_RNA-Seq MTOR-GARNL3 MTOR chr1 11217208 - GARNL3 chr9 130151182 + Exonic hg19 UCEC TCGA-EY-A210 2 Out-of-Frame Inter-chr p36.22 Oncogene q33.3 Seq+ 15967 ChimerSeq FusionScan TCGA_RNA-Seq SPECC1L-PTPLAD1 SPECC1L chr22 24666951 + PTPLAD1 chr15 65844013 + Exonic hg19 UCEC TCGA-EY-A210 2 5'UTR-CDS Inter-chr q11.23 Seq+ 15968 ChimerSeq FusionScan TCGA_RNA-Seq METTL16-RTN4RL1 METTL16 chr17 2341402 - RTN4RL1 chr17 1841102 - Exonic hg19 UCEC TCGA-D1-A3DH 5 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 15969 ChimerSeq FusionScan TCGA_RNA-Seq HIPK2-PARP12 HIPK2 chr7 139415730 - PARP12 chr7 139726148 - Exonic hg19 UCEC TCGA-A5-A2K4 5 In-Frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Seq+ 15970 ChimerSeq FusionScan TCGA_RNA-Seq ZNF512-ANXA4 ZNF512 chr2 27806009 + ANXA4 chr2 70008651 + Exonic hg19 UCEC TCGA-A5-A2K4 4 CDS-5'UTR Intra-chr p23.3 Transcription factor p13.3 Seq+ 15971 ChimerSeq FusionScan TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5460690 - RNF216 chr7 5681007 - Exonic hg19 UCEC TCGA-A5-A2K4 3 Out-of-Frame Intra-chr p22.1 p22.1 Seq+ 15972 ChimerSeq FusionScan TCGA_RNA-Seq RPL22-MECOM RPL22 chr1 6252989 - MECOM chr3 169099312 - Exonic hg19 UCEC TCGA-A5-A2K4 2 Out-of-Frame Inter-chr p36.31 q26.2 Transcription factor KB 15973 ChimerSeq FusionScan TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5463071 - RNF216 chr7 5681007 - Exonic hg19 UCEC TCGA-A5-A2K4 2 5'UTR-CDS Intra-chr p22.1 p22.1 Seq+ 15974 ChimerSeq FusionScan TCGA_RNA-Seq FBXO46-ARG2 FBXO46 chr19 46234106 - ARG2 chr14 68108902 + Exonic hg19 UCEC TCGA-A5-A2K4 2 5'UTR-5'UTR Inter-chr q13.32 q24.1 Seq+ 15975 ChimerSeq FusionScan TCGA_RNA-Seq FN1-CSE1L FN1 chr2 216246934 - CSE1L chr20 47712885 + Exonic hg19 UCEC TCGA-A5-A2K4 2 Out-of-Frame Inter-chr q35 Oncogene q13.13 15976 ChimerSeq FusionScan TCGA_RNA-Seq SH3PXD2A-MAP1S SH3PXD2A chr10 105452785 - MAP1S chr19 17845081 + Exonic hg19 UCEC TCGA-A5-A2K4 2 Out-of-Frame Inter-chr q24.33 p13.11 Seq+ 15977 ChimerSeq FusionScan TCGA_RNA-Seq RAB4A-MSN RAB4A chr1 229434819 + MSN chrX 64953045 + Exonic hg19 UCEC TCGA-A5-A2K4 2 Out-of-Frame Inter-chr q42.13 q12 15978 ChimerSeq FusionScan TCGA_RNA-Seq RARG-MFSD5 RARG chr12 53621145 - MFSD5 chr12 53646601 + Exonic hg19 UCEC TCGA-EO-A1Y5 8 Out-of-Frame Intra-chr q13.13 Transcription factor q13.13 Seq+ 15979 ChimerSeq FusionScan TCGA_RNA-Seq EEF1G-ENG EEF1G chr11 62334870 - ENG chr9 130605524 - Exonic hg19 UCEC TCGA-EO-A1Y5 2 In-Frame Inter-chr q12.3 q34.11 15980 ChimerSeq FusionScan TCGA_RNA-Seq TSPO-CRYZL1 TSPO chr22 43547610 + CRYZL1 chr21 34997066 - Exonic hg19 UCEC TCGA-B5-A1MZ 2 5'UTR-CDS Inter-chr q13.2 q22.11 15981 ChimerSeq FusionScan TCGA_RNA-Seq PABPC1-ZFPM2 PABPC1 chr8 101733618 - ZFPM2 chr8 106431371 + Exonic hg19 UCEC TCGA-AX-A3FV 3 In-Frame Intra-chr q22.3 q22.3 Transcription factor Seq+ 15982 ChimerSeq FusionScan TCGA_RNA-Seq DNM3-QTRT1 DNM3 chr1 171810957 + QTRT1 chr19 10812625 + Exonic hg19 UCEC TCGA-D1-A161 3 Out-of-Frame Inter-chr q24.3 p13.2 15983 ChimerSeq FusionScan TCGA_RNA-Seq SPOP-NDUFS5 SPOP chr17 47755294 - NDUFS5 chr1 39494394 + Exonic hg19 UCEC TCGA-EY-A4KR 7 5'UTR-5'UTR Inter-chr q21.33 Oncogene Tumor suppressor gene p34.3 Seq+ 15984 ChimerSeq FusionScan TCGA_RNA-Seq SCRN2-CBX1 SCRN2 chr17 45918035 - CBX1 chr17 46152462 - Exonic hg19 UCEC TCGA-EY-A4KR 5 In-Frame Intra-chr q21.32 q21.32 Seq+ 15985 ChimerSeq FusionScan TCGA_RNA-Seq ANKRD27-PEPD ANKRD27 chr19 33118988 - PEPD chr19 33902655 - Exonic hg19 UCEC TCGA-EY-A4KR 3 Out-of-Frame Intra-chr q13.11 q13.11 Seq+ 15986 ChimerSeq FusionScan TCGA_RNA-Seq GLYR1-C16orf89 GLYR1 chr16 4861170 - C16orf89 chr16 5097965 - Exonic hg19 UCEC TCGA-EY-A4KR 3 Out-of-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 15987 ChimerSeq FusionScan TCGA_RNA-Seq RFX3-PLGRKT RFX3 chr9 3395471 - PLGRKT chr9 5361888 - Exonic hg19 UCEC TCGA-EY-A4KR 3 In-Frame Intra-chr p24.2 Transcription factor p24.1 Seq+ 15988 ChimerSeq FusionScan TCGA_RNA-Seq ITGB8-ATM ITGB8 chr7 20403345 + ATM chr11 108137897 + Exonic hg19 UCEC TCGA-EY-A4KR 2 In-Frame Inter-chr p21.1 q22.3 Atypical:PIKK Oncogene Tumor suppressor gene Seq+ 15989 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 UCEC TCGA-EY-A4KR 2 Out-of-Frame Intra-chr q22.2 q22.2 15990 ChimerSeq FusionScan TCGA_RNA-Seq ARID1B-EZR ARID1B chr6 157256710 + EZR chr6 159210403 - Exonic hg19 UCEC TCGA-EY-A4KR 2 In-Frame Intra-chr q25.3 Oncogene q25.3 Seq+ 15991 ChimerSeq FusionScan TCGA_RNA-Seq ITCH-RALY ITCH chr20 32951155 + RALY chr20 32619327 + Exonic hg19 UCEC TCGA-D1-A16I 6 5'UTR-5'UTR Intra-chr q11.22 q11.22 Seq+ 15992 ChimerSeq FusionScan TCGA_RNA-Seq TEAD4-ARL8A TEAD4 chr12 3069206 + ARL8A chr1 202107576 - Exonic hg19 UCEC TCGA-D1-A16I 3 5'UTR-CDS Inter-chr p13.33 Transcription factor q32.1 Seq+ 15993 ChimerSeq FusionScan TCGA_RNA-Seq CSNK1D-POLR2E CSNK1D chr17 80223561 - POLR2E chr19 1090987 - Exonic hg19 UCEC TCGA-D1-A16I 2 Out-of-Frame Inter-chr q25.3 p13.3 Seq+ 15994 ChimerSeq FusionScan TCGA_RNA-Seq SLC16A3-DUS1L SLC16A3 chr17 80186982 + DUS1L chr17 80022945 - Exonic hg19 UCEC TCGA-D1-A16I 2 5'UTR-5'UTR Intra-chr q25.3 q25.3 Seq+ 15995 ChimerSeq FusionScan TCGA_RNA-Seq ROR2-TCERG1L ROR2 chr9 94538022 - TCERG1L chr10 132902617 - Exonic hg19 UCEC TCGA-FI-A3PV 4 Out-of-Frame Inter-chr q22.31 TK:Ror Tumor suppressor gene q26.3 15996 ChimerSeq FusionScan TCGA_RNA-Seq HSPG2-MATN2 HSPG2 chr1 22165863 - MATN2 chr8 98991113 + Exonic hg19 UCEC TCGA-FI-A3PV 2 In-Frame Inter-chr p36.12 q22.1 Seq+ 15997 ChimerSeq FusionScan TCGA_RNA-Seq WDR20-PPP2R5C WDR20 chr14 102606509 + PPP2R5C chr14 102323022 + Exonic hg19 UCEC TCGA-FI-A3PV 2 Out-of-Frame Intra-chr q32.31 q32.31 Tumor suppressor gene Seq+ 15998 ChimerSeq FusionScan TCGA_RNA-Seq GON4L-RAB5B GON4L chr1 155823066 - RAB5B chr12 56380652 + Exonic hg19 UCEC TCGA-FI-A2F9 5 CDS-5'UTR Inter-chr q22 q13.2 Seq+ 15999 ChimerSeq FusionScan TCGA_RNA-Seq ATP6V1C1-PML ATP6V1C1 chr8 104054635 + PML chr15 74315168 + Exonic hg19 UCEC TCGA-FI-A2F9 2 In-Frame Inter-chr q22.3 q24.1 Oncogene Tumor suppressor gene Seq+ 16000 ChimerSeq FusionScan TCGA_RNA-Seq CPSF6-CHMP1A CPSF6 chr12 69656342 + CHMP1A chr16 89713739 - Exonic hg19 UCEC TCGA-EY-A1GX 2 3'UTR-3'UTR Inter-chr q15 q24.3 Seq+ 16001 ChimerSeq FusionScan TCGA_RNA-Seq DENND1A-PSMB7 DENND1A chr9 126554865 - PSMB7 chr9 127146935 - Exonic hg19 UCEC TCGA-AX-A3FX 4 Out-of-Frame Intra-chr q33.3 q33.3 Seq+ 16002 ChimerSeq FusionScan TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5460690 - RNF216 chr7 5681007 - Exonic hg19 UCEC TCGA-AX-A3FX 2 Out-of-Frame Intra-chr p22.1 p22.1 Seq+ 16003 ChimerSeq FusionScan TCGA_RNA-Seq PUM1-NKAIN1 PUM1 chr1 31532050 - NKAIN1 chr1 31661034 - Exonic hg19 UCEC TCGA-A5-A0R6 2 In-Frame Intra-chr p35.2 p35.2 Seq+ 16004 ChimerSeq FusionScan TCGA_RNA-Seq POTEF-THOC3 POTEF chr2 130885281 - THOC3 chr5 175388437 - Exonic hg19 UCEC TCGA-AX-A3FS 3 5'UTR-CDS Inter-chr q21.1 q35.2 16005 ChimerSeq FusionScan TCGA_RNA-Seq BTBD1-CSTF3 BTBD1 chr15 83725140 - CSTF3 chr11 33163532 - Exonic hg19 UCEC TCGA-AX-A3FS 2 In-Frame Inter-chr q25.2 p13 16006 ChimerSeq FusionScan TCGA_RNA-Seq TANC1-SLC4A1AP TANC1 chr2 159922483 + SLC4A1AP chr2 27907903 + Exonic hg19 UCEC TCGA-D1-A0ZP 3 Out-of-Frame Intra-chr q24.2 p23.3 16007 ChimerSeq FusionScan TCGA_RNA-Seq BMPR1A-C10orf11 BMPR1A chr10 88659883 + C10orf11 chr10 77818423 + Exonic hg19 UCEC TCGA-EY-A3L3 9 In-Frame Intra-chr q23.2 TKL:STKR Oncogene Tumor suppressor gene Seq+ 16008 ChimerSeq FusionScan TCGA_RNA-Seq BMPR1A-C10orf11 BMPR1A chr10 88659883 + C10orf11 chr10 78316966 + Exonic hg19 UCEC TCGA-EY-A3L3 2 Out-of-Frame Intra-chr q23.2 TKL:STKR Oncogene Tumor suppressor gene Seq+ 16009 ChimerSeq FusionScan TCGA_RNA-Seq UNK-C1QTNF1 UNK chr17 73781065 + C1QTNF1 chr17 77040036 + Exonic hg19 UCEC TCGA-EY-A3L3 2 5'UTR-5'UTR Intra-chr q25.1 q25.3 Seq+ 16010 ChimerSeq FusionScan TCGA_RNA-Seq PPP4R1-DPP4 PPP4R1 chr18 9561977 - DPP4 chr2 162851882 - Exonic hg19 UCEC TCGA-EY-A3L3 2 In-Frame Inter-chr p11.22 q24.2 Tumor suppressor gene Seq+ 16011 ChimerSeq FusionScan TCGA_RNA-Seq HADH-HPGD HADH chr4 108911220 + HPGD chr4 175429943 - Exonic hg19 UCEC TCGA-AJ-A3NF 2 In-Frame Intra-chr q25 q34.1 Tumor suppressor gene Seq+ 16012 ChimerSeq FusionScan TCGA_RNA-Seq NEDD9-ADTRP NEDD9 chr6 11213513 - ADTRP chr6 11714745 - Exonic hg19 UCEC TCGA-A5-A2K2 4 Out-of-Frame Intra-chr p24.2 p24.1 Seq+ 16013 ChimerSeq FusionScan TCGA_RNA-Seq COPZ1-HOXC9 COPZ1 chr12 54718965 + HOXC9 chr12 54396213 + Exonic hg19 UCEC TCGA-A5-A2K2 4 Out-of-Frame Intra-chr q13.13 q13.13 Transcription factor Seq+ 16014 ChimerSeq FusionScan TCGA_RNA-Seq GATC-CCDC64 GATC chr12 120894982 + CCDC64 chr12 120499513 + Exonic hg19 UCEC TCGA-A5-A2K2 2 Out-of-Frame Intra-chr q24.31 Seq+ 16015 ChimerSeq FusionScan TCGA_RNA-Seq BIRC6-MATN3 BIRC6 chr2 32641231 + MATN3 chr2 20206071 - Exonic hg19 UCEC TCGA-EO-A3KW 4 In-Frame Intra-chr p22.3 p24.1 Seq+ 16016 ChimerSeq FusionScan TCGA_RNA-Seq COPZ1-AHDC1 COPZ1 chr12 54718965 + AHDC1 chr1 27861427 - Exonic hg19 UCEC TCGA-EO-A3KW 3 CDS-3'UTR Inter-chr q13.13 p35.3 Transcription factor Seq+ 16017 ChimerSeq FusionScan TCGA_RNA-Seq NF1-YPEL5 NF1 chr17 29528503 + YPEL5 chr2 30379493 + Exonic hg19 UCEC TCGA-EO-A3KW 3 CDS-5'UTR Inter-chr q11.2 Oncogene Tumor suppressor gene p23.1 Seq+ 16018 ChimerSeq FusionScan TCGA_RNA-Seq CBX5-WDTC1 CBX5 chr12 54673791 - WDTC1 chr1 27608729 + Exonic hg19 UCEC TCGA-EO-A3KW 3 5'UTR-CDS Inter-chr q13.13 Tumor suppressor gene p36.11 Seq+ 16019 ChimerSeq FusionScan TCGA_RNA-Seq CYB561D2-RBM6 CYB561D2 chr3 50388991 + RBM6 chr3 50085677 + Exonic hg19 UCEC TCGA-EO-A3KW 2 Out-of-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene Seq+ 16020 ChimerSeq FusionScan TCGA_RNA-Seq PTK2-TRAPPC9 PTK2 chr8 141727696 - TRAPPC9 chr8 141034176 - Exonic hg19 UCEC TCGA-EO-A3KW 2 In-Frame Intra-chr q24.3 q24.3 Seq+ 16021 ChimerSeq FusionScan TCGA_RNA-Seq TPST2-CRYBB1 TPST2 chr22 26986016 - CRYBB1 chr22 27012302 - Exonic hg19 UCEC TCGA-EO-A3KW 2 5'UTR-5'UTR Intra-chr q12.1 q12.1 Seq+ 16022 ChimerSeq FusionScan TCGA_RNA-Seq FANCI-HADHB FANCI chr15 89817535 + HADHB chr2 26492820 + Exonic hg19 UCS TCGA-N5-A59F 2 In-Frame Inter-chr q26.1 p23.3 Seq+ 16023 ChimerSeq FusionScan TCGA_RNA-Seq CUEDC2-POLR3A CUEDC2 chr10 104192282 - POLR3A chr10 79740031 - Exonic hg19 UCS TCGA-N5-A59F 2 5'UTR-CDS Intra-chr q24.32 q22.3 Seq+ 16024 ChimerSeq FusionScan TCGA_RNA-Seq SPTAN1-SGTA SPTAN1 chr9 131314975 + SGTA chr19 2761520 - Exonic hg19 UCS TCGA-NA-A4R1 6 5'UTR-CDS Inter-chr q34.11 p13.3 Seq+ 16025 ChimerSeq FusionScan TCGA_RNA-Seq BTBD2-GTSE1 BTBD2 chr19 1987164 - GTSE1 chr22 46719086 + Exonic hg19 UCS TCGA-NA-A4R1 4 Out-of-Frame Inter-chr p13.3 q13.31 Seq+ 16026 ChimerSeq FusionScan TCGA_RNA-Seq WASF2-FGR WASF2 chr1 27816496 - FGR chr1 27951662 - Exonic hg19 UCS TCGA-NA-A4R1 4 5'UTR-5'UTR Intra-chr p36.11 p35.3 TK:Src Seq+ 16027 ChimerSeq FusionScan TCGA_RNA-Seq BMPR2-NOP58 BMPR2 chr2 203242273 + NOP58 chr2 203139835 + Exonic hg19 UCS TCGA-NA-A4R1 3 3'UTR-CDS Intra-chr q33.1 TKL:STKR Tumor suppressor gene q33.1 Seq+ 16028 ChimerSeq FusionScan TCGA_RNA-Seq PHF21A-ARHGAP1 PHF21A chr11 46142485 - ARHGAP1 chr11 46717706 - Exonic hg19 UCS TCGA-NA-A4R1 2 5'UTR-5'UTR Intra-chr p11.2 Transcription factor p11.2 Seq+ 16029 ChimerSeq FusionScan TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104730720 + LHFPL3 chr7 104377121 + Exonic hg19 UCS TCGA-NA-A4R1 2 Out-of-Frame Intra-chr q22.2 Seq+ 16030 ChimerSeq FusionScan TCGA_RNA-Seq CUX2-IFT81 CUX2 chr12 111472044 + IFT81 chr12 110565164 + Exonic hg19 UCS TCGA-NA-A4R1 2 CDS-5'UTR Intra-chr q24.11 Transcription factor q24.11 Seq+ 16031 ChimerSeq FusionScan TCGA_RNA-Seq RAD21-EIF3H RAD21 chr8 117864186 - EIF3H chr8 117738411 - Exonic hg19 UCS TCGA-N8-A4PP 5 In-Frame Intra-chr q24.11 q24.11 Seq+ 16032 ChimerSeq FusionScan TCGA_RNA-Seq RAB5B-DGKA RAB5B chr12 56367923 + DGKA chr12 56330206 + Exonic hg19 UCS TCGA-N8-A4PP 3 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 16033 ChimerSeq FusionScan TCGA_RNA-Seq SPON1-THAP2 SPON1 chr11 14063201 + THAP2 chr12 72067982 + Exonic hg19 UCS TCGA-N8-A4PP 2 In-Frame Inter-chr p15.2 q21.1 Transcription factor Seq+ 16034 ChimerSeq FusionScan TCGA_RNA-Seq DPY19L3-TDRD12 DPY19L3 chr19 32902278 + TDRD12 chr19 33222630 + Exonic hg19 UCS TCGA-N8-A4PP 2 In-Frame Intra-chr q13.11 q13.11 Seq+ 16035 ChimerSeq FusionScan TCGA_RNA-Seq ZNF546-HNRNPD ZNF546 chr19 40514472 + HNRNPD chr4 83280792 - Exonic hg19 UCS TCGA-N8-A4PP 2 Out-of-Frame Inter-chr Transcription factor q21.22 Seq+ 16036 ChimerSeq FusionScan TCGA_RNA-Seq ENSA-KLHDC9 ENSA chr1 150598117 - KLHDC9 chr1 161069850 + Exonic hg19 UCS TCGA-N8-A4PP 2 Out-of-Frame Intra-chr q21.3 q23.3 Seq+ 16037 ChimerSeq FusionScan TCGA_RNA-Seq EIF2AK4-IVD EIF2AK4 chr15 40284430 + IVD chr15 40708276 + Exonic hg19 UCS TCGA-N7-A4Y5 2 Out-of-Frame Intra-chr q15.1 q15.1 Seq+ 16038 ChimerSeq FusionScan TCGA_RNA-Seq DGAT1-UBASH3A DGAT1 chr8 145550099 - UBASH3A chr21 43857597 + Exonic hg19 UCS TCGA-N5-A4RJ 2 Out-of-Frame Inter-chr q24.3 q22.3 Seq+ 16039 ChimerSeq FusionScan TCGA_RNA-Seq MPPED1-SCFD2 MPPED1 chr22 43870841 + SCFD2 chr4 53740228 - Exonic hg19 UCS TCGA-NA-A4QY 5 Out-of-Frame Inter-chr q13.2 q12 Seq+ 16040 ChimerSeq FusionScan TCGA_RNA-Seq RAB7A-GATSL1 RAB7A chr3 128516912 + GATSL1 chr7 74422159 + Exonic hg19 UCS TCGA-N9-A4Q1 2 Out-of-Frame Inter-chr q21.3 Tumor suppressor gene 16041 ChimerSeq FusionScan TCGA_RNA-Seq KDM4B-UVRAG KDM4B chr19 5016350 + UVRAG chr11 75851754 + Exonic hg19 UCS TCGA-N9-A4Q1 2 5'UTR-CDS Inter-chr p13.3 q13.5 Tumor suppressor gene Seq+ 16042 ChimerSeq FusionScan TCGA_RNA-Seq VTI1A-HDAC1 VTI1A chr10 114298089 + HDAC1 chr1 32790079 + Exonic hg19 UCS TCGA-N9-A4Q1 2 In-Frame Inter-chr q25.2 p35.2 Tumor suppressor gene Seq+ 16043 ChimerSeq FusionScan TCGA_RNA-Seq CHIC2-TSGA10 CHIC2 chr4 54915121 - TSGA10 chr2 99614684 - Exonic hg19 UCS TCGA-N9-A4Q1 2 Out-of-Frame Inter-chr q12 q11.2 Seq+ 16044 ChimerSeq FusionScan TCGA_RNA-Seq MSI2-CISD3 MSI2 chr17 55478832 + CISD3 chr17 36887012 + Exonic hg19 UCS TCGA-N8-A4PL 3 In-Frame Intra-chr q22 Seq+ 16045 ChimerSeq FusionScan TCGA_RNA-Seq CCAR1-CAAP1 CCAR1 chr10 70514584 + CAAP1 chr9 26887511 - Exonic hg19 UCS TCGA-N8-A4PL 2 In-Frame Inter-chr q21.3 Tumor suppressor gene p21.2 16046 ChimerSeq FusionScan TCGA_RNA-Seq CD44-CAPRIN1 CD44 chr11 35160917 + CAPRIN1 chr11 34110941 + Exonic hg19 UCS TCGA-NG-A4VU 4 In-Frame Intra-chr p13 Oncogene Tumor suppressor gene p13 Seq+ 16047 ChimerSeq FusionScan TCGA_RNA-Seq MATN2-C8orf47 MATN2 chr8 99045404 + C8orf47 chr8 99101303 + Exonic hg19 UCS TCGA-N5-A4RU 3 In-Frame Intra-chr q22.1 16048 ChimerSeq FusionScan TCGA_RNA-Seq NUDT3-TCP11 NUDT3 chr6 34360040 - TCP11 chr6 35096959 - Exonic hg19 UCS TCGA-N5-A4RU 3 Out-of-Frame Intra-chr p21.31 p21.31 Seq+ 16049 ChimerSeq FusionScan TCGA_RNA-Seq NUDT3-TCP11 NUDT3 chr6 34360040 - TCP11 chr6 35090114 - Exonic hg19 UCS TCGA-N5-A4RU 2 In-Frame Intra-chr p21.31 p21.31 Seq+ 16050 ChimerSeq FusionScan TCGA_RNA-Seq RAI1-UBB RAI1 chr17 17585107 + UBB chr17 16285215 + Exonic hg19 UCS TCGA-N5-A4RU 2 5'UTR-5'UTR Intra-chr p11.2 p11.2 16051 ChimerSeq FusionScan TCGA_RNA-Seq CELF1-FNBP4 CELF1 chr11 47504246 - FNBP4 chr11 47739064 - Exonic hg19 UCS TCGA-N9-A4Q4 3 Out-of-Frame Intra-chr p11.2 p11.2 Seq+ 16052 ChimerSeq FusionScan TCGA_RNA-Seq PTPN12-RSBN1L PTPN12 chr7 77166962 + RSBN1L chr7 77378740 + Exonic hg19 UCS TCGA-NA-A4QW 2 Out-of-Frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 16053 ChimerSeq FusionScan TCGA_RNA-Seq CNOT8-PROL1 CNOT8 chr5 154244945 + PROL1 chr4 71275096 + Exonic hg19 UCS TCGA-NA-A4QW 2 Out-of-Frame Inter-chr q33.2 Seq+ 16054 ChimerSeq FusionScan TCGA_RNA-Seq CES4A-ACHE CES4A chr16 67040720 + ACHE chr7 100488959 - Exonic hg19 UCS TCGA-NA-A4QW 2 In-Frame Inter-chr q22.1 q22.1 Tumor suppressor gene 16055 ChimerSeq FusionScan TCGA_RNA-Seq LMBR1L-TUBA1A LMBR1L chr12 49497469 - TUBA1A chr12 49580616 - Exonic hg19 UCS TCGA-N6-A4V9 2 Out-of-Frame Intra-chr q13.12 q13.12 16056 ChimerSeq FusionScan TCGA_RNA-Seq LMBR1L-TUBA1C LMBR1L chr12 49497469 - TUBA1C chr12 49663247 + Exonic hg19 UCS TCGA-N6-A4V9 2 Out-of-Frame Intra-chr q13.12 q13.12 16057 ChimerSeq FusionScan TCGA_RNA-Seq NIPBL-SPEF2 NIPBL chr5 36877280 + SPEF2 chr5 35800069 + Exonic hg19 UCS TCGA-NF-A4WX 4 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 16058 ChimerSeq FusionScan TCGA_RNA-Seq KCNQ1-LSP1 KCNQ1 chr11 2466714 + LSP1 chr11 1901316 + Exonic hg19 UCS TCGA-NF-A4WX 3 In-Frame Intra-chr p15.5 p15.5 Seq+ 16059 ChimerSeq FusionScan TCGA_RNA-Seq SF3A3-HPCAL4 SF3A3 chr1 38425791 - HPCAL4 chr1 40150283 - Exonic hg19 UCS TCGA-NF-A4WX 3 CDS-5'UTR Intra-chr p34.3 p34.2 Seq+ 16060 ChimerSeq FusionScan TCGA_RNA-Seq C2orf48-C9orf3 C2orf48 chr2 10282502 + C9orf3 chr9 97848963 + Exonic hg19 UCS TCGA-QM-A5NM 2 CDS-3'UTR Inter-chr p25.1 q22.32 16061 ChimerSeq FusionScan TCGA_RNA-Seq FAM24B-MGMT FAM24B chr10 124615160 - MGMT chr10 131334504 + Exonic hg19 UCS TCGA-QM-A5NM 2 5'UTR-CDS Intra-chr q26.13 q26.3 16062 ChimerSeq FusionScan TCGA_RNA-Seq RPS6-WNK2 RPS6 chr9 19378365 - WNK2 chr9 96079801 + Exonic hg19 UCS TCGA-QM-A5NM 2 3'UTR-CDS Intra-chr p22.1 q22.31 Tumor suppressor gene 16063 ChimerSeq FusionScan TCGA_RNA-Seq AP5B1-CFL1 AP5B1 chr11 65547912 - CFL1 chr11 65623713 - Exonic hg19 UCS TCGA-N7-A59B 3 In-Frame Intra-chr q13.1 q13.1 Seq+ 16064 ChimerSeq FusionScan TCGA_RNA-Seq DPM3-MUC1 DPM3 chr1 155112966 - MUC1 chr1 155158685 - Exonic hg19 UCS TCGA-N9-A4Q7 2 5'UTR-CDS Intra-chr q22 q22 Oncogene Seq+ 16065 ChimerSeq FusionScan TCGA_RNA-Seq SESTD1-CNOT8 SESTD1 chr2 180129225 - CNOT8 chr5 154251289 + Exonic hg19 UCS TCGA-N6-A4VF 2 5'UTR-CDS Inter-chr q31.2 q33.2 16066 ChimerSeq FusionScan TCGA_RNA-Seq ZNF423-NCEH1 ZNF423 chr16 49823397 - NCEH1 chr3 172351882 - Exonic hg19 UCS TCGA-NF-A5CP 3 Out-of-Frame Inter-chr q12.1 Transcription factor q26.31 Seq+ 16067 ChimerSeq FusionScan TCGA_RNA-Seq JHDM1D-DENND2A JHDM1D chr7 139818912 - DENND2A chr7 140302342 - Exonic hg19 UCS TCGA-NF-A5CP 2 CDS-5'UTR Intra-chr q34 Seq+ 16068 ChimerSeq FusionScan TCGA_RNA-Seq UBE2G1-PPIL2 UBE2G1 chr17 4269565 - PPIL2 chr22 22024201 + Exonic hg19 UCS TCGA-NF-A5CP 2 Out-of-Frame Inter-chr p13.2 q11.21 Seq+ 16069 ChimerSeq FusionScan TCGA_RNA-Seq FUT2-RASIP1 FUT2 chr19 49199336 + RASIP1 chr19 49228217 - Exonic hg19 UCS TCGA-N6-A4VE 5 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 16070 ChimerSeq FusionScan TCGA_RNA-Seq BCL2L13-DGCR14 BCL2L13 chr22 18166087 + DGCR14 chr22 19124945 - Exonic hg19 UCS TCGA-N6-A4VE 3 In-Frame Intra-chr q11.21 q11.21 Seq+ 16071 ChimerSeq FusionScan TCGA_RNA-Seq C6orf106-FKBP5 C6orf106 chr6 34664222 - FKBP5 chr6 35610620 - Exonic hg19 UCS TCGA-N6-A4VE 2 CDS-5'UTR Intra-chr p21.31 p21.31 Seq+ 16072 ChimerSeq FusionScan TCGA_RNA-Seq PDRG1-C20orf112 PDRG1 chr20 30536610 - C20orf112 chr20 31099259 - Exonic hg19 UCS TCGA-N6-A4VE 2 In-Frame Intra-chr q11.21 Seq+ 16073 ChimerSeq FusionScan TCGA_RNA-Seq ZMIZ1-ADK ZMIZ1 chr10 80829027 + ADK chr10 76468078 + Exonic hg19 UCS TCGA-NA-A4QV 3 5'UTR-CDS Intra-chr q22.3 q22.2 Seq+ 16074 ChimerSeq FusionScan TCGA_RNA-Seq NUP93-THADA NUP93 chr16 56816126 + THADA chr2 43460021 - Exonic hg19 UCS TCGA-NA-A4QV 2 5'UTR-CDS Inter-chr q13 p21 Seq+ 16075 ChimerSeq FusionScan TCGA_RNA-Seq DIXDC1-C11orf1 DIXDC1 chr11 111808283 + C11orf1 chr11 111754494 + Exonic hg19 UCS TCGA-N6-A4VC 2 Out-of-Frame Intra-chr q23.1 q23.1 Seq+ 16076 ChimerSeq FusionScan TCGA_RNA-Seq SLC39A7-SAT2 SLC39A7 chr6 33168715 + SAT2 chr17 7530732 - Exonic hg19 UCS TCGA-N6-A4VC 2 3'UTR-CDS Inter-chr p13.1 16077 ChimerSeq FusionScan TCGA_RNA-Seq SERINC3-NCOA5 SERINC3 chr20 43139929 - NCOA5 chr20 44691528 - Exonic hg19 UCS TCGA-N8-A4PN 3 In-Frame Intra-chr q13.12 q13.12 Tumor suppressor gene Seq+ 16078 ChimerSeq FusionScan TCGA_RNA-Seq HNRNPM-MCOLN1 HNRNPM chr19 8527465 + MCOLN1 chr19 7592405 + Exonic hg19 UCS TCGA-N8-A4PN 2 Out-of-Frame Intra-chr p13.2 p13.2 Seq+ 16079 ChimerSeq FusionScan TCGA_RNA-Seq CAMK2G-MYOZ1 CAMK2G chr10 75597225 - MYOZ1 chr10 75399793 - Exonic hg19 UCS TCGA-N5-A4RO 4 CDS-5'UTR Intra-chr q22.2 q22.2 Seq+ 16080 ChimerSeq FusionScan TCGA_RNA-Seq MAU2-MAP1S MAU2 chr19 19446996 + MAP1S chr19 17845081 + Exonic hg19 UCS TCGA-N5-A4RO 3 In-Frame Intra-chr p13.11 p13.11 Seq+ 16081 ChimerSeq FusionScan TCGA_RNA-Seq PDAP1-ZNF789 PDAP1 chr7 98995484 - ZNF789 chr7 99077283 + Exonic hg19 UCS TCGA-N5-A4RO 2 Out-of-Frame Intra-chr q22.1 q22.1 Transcription factor Seq+ 16082 ChimerSeq FusionScan TCGA_RNA-Seq SNX11-SNF8 SNX11 chr17 46185200 + SNF8 chr17 47021337 - Exonic hg19 UCS TCGA-N8-A56S 7 5'UTR-CDS Intra-chr q21.32 q21.32 Seq+ 16083 ChimerSeq FusionScan TCGA_RNA-Seq AP1S1-PTOV1 AP1S1 chr7 100797798 + PTOV1 chr19 50357662 + Exonic hg19 UCS TCGA-N8-A56S 7 In-Frame Inter-chr q22.1 q13.33 Seq+ 16084 ChimerSeq FusionScan TCGA_RNA-Seq NFX1-DNAJA1 NFX1 chr9 33290595 + DNAJA1 chr9 33029882 + Exonic hg19 UCS TCGA-N8-A56S 6 In-Frame Intra-chr p13.3 Transcription factor p21.1 Seq+ 16085 ChimerSeq FusionScan TCGA_RNA-Seq CRHR1-SPOP CRHR1 chr17 43699407 + SPOP chr17 47714171 - Exonic hg19 UCS TCGA-N8-A56S 4 5'UTR-5'UTR Intra-chr q21.31 q21.33 Oncogene Tumor suppressor gene Seq+ 16086 ChimerSeq FusionScan TCGA_RNA-Seq NUP188-TBC1D13 NUP188 chr9 131721413 + TBC1D13 chr9 131565528 + Exonic hg19 UCS TCGA-N8-A56S 3 In-Frame Intra-chr q34.11 q34.11 Seq+ 16087 ChimerSeq FusionScan TCGA_RNA-Seq CRHR1-SPOP CRHR1 chr17 43699407 + SPOP chr17 47700238 - Exonic hg19 UCS TCGA-N8-A56S 3 5'UTR-5'UTR Intra-chr q21.31 q21.33 Oncogene Tumor suppressor gene Seq+ 16088 ChimerSeq FusionScan TCGA_RNA-Seq KANSL1-SPOP KANSL1 chr17 44301036 - SPOP chr17 47700238 - Exonic hg19 UCS TCGA-N8-A56S 3 5'UTR-5'UTR Intra-chr q21.33 Oncogene Tumor suppressor gene Seq+ 16089 ChimerSeq FusionScan TCGA_RNA-Seq LSM12-ITGA2B LSM12 chr17 42141168 - ITGA2B chr17 42449791 - Exonic hg19 UCS TCGA-N8-A56S 2 In-Frame Intra-chr q21.31 q21.31 Seq+ 16090 ChimerSeq FusionScan TCGA_RNA-Seq ASB1-RBM44 ASB1 chr2 239342336 + RBM44 chr2 238742639 + Exonic hg19 UCS TCGA-N8-A56S 2 Out-of-Frame Intra-chr q37.3 q37.3 Seq+ 16091 ChimerSeq FusionScan TCGA_RNA-Seq DSTYK-CSRP1 DSTYK chr1 205180398 - CSRP1 chr1 201454504 - Exonic hg19 UCS TCGA-N8-A56S 2 Out-of-Frame Intra-chr q32.1 q32.1 Seq+ 16092 ChimerSeq FusionScan TCGA_RNA-Seq KIF24-ZCCHC7 KIF24 chr9 34286614 - ZCCHC7 chr9 37327795 + Exonic hg19 UCS TCGA-N8-A56S 2 In-Frame Intra-chr p13.3 p13.2 Seq+ 16093 ChimerSeq FusionScan TCGA_RNA-Seq PHLDB2-CD96 PHLDB2 chr3 111451550 + CD96 chr3 111342600 + Exonic hg19 UCS TCGA-N8-A56S 2 5'UTR-CDS Intra-chr q13.2 q13.13 Seq+ 16094 ChimerSeq FusionScan TCGA_RNA-Seq BPTF-NOL11 BPTF chr17 65862803 + NOL11 chr17 65739858 + Exonic hg19 UCS TCGA-N8-A56S 2 Out-of-Frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 16095 ChimerSeq FusionScan TCGA_RNA-Seq SNX11-SNF8 SNX11 chr17 46188129 + SNF8 chr17 47021337 - Exonic hg19 UCS TCGA-N8-A56S 2 5'UTR-CDS Intra-chr q21.32 q21.32 Seq+ 16096 ChimerSeq FusionScan TCGA_RNA-Seq RNF2-MRC2 RNF2 chr1 185056772 + MRC2 chr17 60741908 + Exonic hg19 UCS TCGA-N5-A4RS 2 Out-of-Frame Inter-chr q25.3 Oncogene q23.2 Seq+ 16097 ChimerSeq FusionScan TCGA_RNA-Seq MTOR-MAD2L2 MTOR chr1 11227498 - MAD2L2 chr1 11740670 - Exonic hg19 UCS TCGA-NA-A4QX 2 CDS-5'UTR Intra-chr p36.22 Oncogene p36.22 Seq+ 16098 ChimerSeq FusionScan TCGA_RNA-Seq WHSC1-NUP210L WHSC1 chr4 1902978 + NUP210L chr1 153984846 - Exonic hg19 UCS TCGA-N5-A4RA 5 In-Frame Inter-chr Oncogene q21.3 Seq+ 16099 ChimerSeq FusionScan TCGA_RNA-Seq CBWD1-PSD4 CBWD1 chr9 175697 - PSD4 chr2 113955140 + Exonic hg19 UCS TCGA-N5-A4RA 3 In-Frame Inter-chr p24.3 q14.1 Seq+ 16100 ChimerSeq FusionScan TCGA_RNA-Seq NUP160-RBM6 NUP160 chr11 47869399 - RBM6 chr3 50114440 + Exonic hg19 UCS TCGA-N5-A4RA 3 Out-of-Frame Inter-chr p11.2 p21.31 Tumor suppressor gene Seq+ 16101 ChimerSeq FusionScan TCGA_RNA-Seq CBWD2-PSD4 CBWD2 chr2 114199014 + PSD4 chr2 113955140 + Exonic hg19 UCS TCGA-N5-A4RA 3 In-Frame Intra-chr q14.1 q14.1 Seq+ 16102 ChimerSeq FusionScan TCGA_RNA-Seq COL3A1-GULP1 COL3A1 chr2 189869090 + GULP1 chr2 189387482 + Exonic hg19 UCS TCGA-N5-A4RA 2 In-Frame Intra-chr q32.2 q32.1 Seq+ 16103 ChimerSeq FusionScan TCGA_RNA-Seq PEPD-FAM20C PEPD chr19 33902577 - FAM20C chr7 298611 + Exonic hg19 UCS TCGA-N5-A4RA 2 In-Frame Inter-chr q13.11 p22.3 16104 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 UCS TCGA-N5-A4RN 2 Out-of-Frame Intra-chr q22.2 q22.2 16105 ChimerSeq FusionScan TCGA_RNA-Seq RBFOX2-TST RBFOX2 chr22 36424287 - TST chr22 37407366 - Exonic hg19 UCS TCGA-N9-A4PZ 5 Out-of-Frame Intra-chr q12.3 Seq+ 16106 ChimerSeq FusionScan TCGA_RNA-Seq YWHAE-GCGR YWHAE chr17 1303340 - GCGR chr17 79766717 + Exonic hg19 UCS TCGA-N9-A4PZ 4 CDS-5'UTR Intra-chr p13.3 q25.3 Seq+ 16107 ChimerSeq FusionScan TCGA_RNA-Seq IVD-ECE1 IVD chr15 40705286 + ECE1 chr1 21586885 - Exonic hg19 UCS TCGA-N9-A4PZ 4 In-Frame Inter-chr q15.1 p36.12 Seq+ 16108 ChimerSeq FusionScan TCGA_RNA-Seq EPHA2-LSM14B EPHA2 chr1 16474872 - LSM14B chr20 60699672 + Exonic hg19 UCS TCGA-N9-A4PZ 2 In-Frame Inter-chr p36.13 Tumor suppressor gene q13.33 Seq+ 16109 ChimerSeq FusionScan TCGA_RNA-Seq NUCKS1-SDCCAG8 NUCKS1 chr1 205696827 - SDCCAG8 chr1 243579003 + Exonic hg19 UCS TCGA-N9-A4PZ 2 In-Frame Intra-chr q32.1 Seq+ 16110 ChimerSeq FusionScan TCGA_RNA-Seq SETD2-PALMD SETD2 chr3 47205343 - PALMD chr1 100159574 + Exonic hg19 UCS TCGA-N9-A4PZ 2 Out-of-Frame Inter-chr p21.31 Oncogene Tumor suppressor gene p21.2 Seq+ 16111 ChimerSeq FusionScan TCGA_RNA-Seq ZNF423-CCAR1 ZNF423 chr16 49764681 - CCAR1 chr10 70545892 + Exonic hg19 UCS TCGA-N8-A4PQ 4 In-Frame Inter-chr q12.1 Transcription factor q21.3 Tumor suppressor gene Seq+ 16112 ChimerSeq FusionScan TCGA_RNA-Seq DGKD-SLC25A17 DGKD chr2 234299129 + SLC25A17 chr22 41175129 - Exonic hg19 UCS TCGA-N8-A4PQ 4 Out-of-Frame Inter-chr q13.2 Seq+ 16113 ChimerSeq FusionScan TCGA_RNA-Seq MPRIP-HOXB13 MPRIP chr17 16981390 + HOXB13 chr17 46804405 - Exonic hg19 UCS TCGA-N8-A4PQ 3 Out-of-Frame Intra-chr p11.2 q21.32 Tumor suppressor gene Transcription factor Seq+ 16114 ChimerSeq FusionScan TCGA_RNA-Seq GNA13-MXRA7 GNA13 chr17 63049619 - MXRA7 chr17 74681247 - Exonic hg19 UCS TCGA-N8-A4PQ 3 Out-of-Frame Intra-chr q24.1 q25.1 Seq+ 16115 ChimerSeq FusionScan TCGA_RNA-Seq LPP-ZNRF1 LPP chr3 187943315 + ZNRF1 chr16 75127469 + Exonic hg19 UCS TCGA-N5-A4RF 3 5'UTR-CDS Inter-chr q27.3 Oncogene q23.1 Seq+ 16116 ChimerSeq FusionScan TCGA_RNA-Seq KIF3B-LINC00028 KIF3B chr20 30865568 + LINC00028 chr20 30074834 + Exonic hg19 UCS TCGA-N6-A4VG 7 5'UTR-5'UTR Intra-chr q11.21 q11.21 Seq+ 16117 ChimerSeq FusionScan TCGA_RNA-Seq AP2A2-TMEM80 AP2A2 chr11 926088 + TMEM80 chr11 698868 + Exonic hg19 UCS TCGA-N6-A4VG 2 In-Frame Intra-chr p15.5 p15.5 Seq+ 16118 ChimerSeq FusionScan TCGA_RNA-Seq TMSB15B-H2BFM TMSB15B chrX 103219195 + H2BFM chrX 103295394 + Exonic hg19 UCS TCGA-N6-A4VG 2 Out-of-Frame Intra-chr q22.2 q22.2 16119 ChimerSeq FusionScan TCGA_RNA-Seq SMARCC1-MAP4 SMARCC1 chr3 47702783 - MAP4 chr3 47969840 - Exonic hg19 UCS TCGA-N6-A4VG 2 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 16120 ChimerSeq FusionScan TCGA_RNA-Seq ZFP3-ARRB2 ZFP3 chr17 4981870 + ARRB2 chr17 4620511 + Exonic hg19 UCS TCGA-N9-A4Q8 2 5'UTR-5'UTR Intra-chr p13.2 Transcription factor p13.2 Seq+ 16121 ChimerSeq FusionScan TCGA_RNA-Seq SNX8-CHST12 SNX8 chr7 2302864 - CHST12 chr7 2472197 + Exonic hg19 UCS TCGA-N9-A4Q8 2 CDS-5'UTR Intra-chr p22.3 p22.3 Seq+ 16122 ChimerSeq FusionScan TCGA_RNA-Seq SAE1-SLC9A1 SAE1 chr19 47646862 + SLC9A1 chr1 27429803 - Exonic hg19 UCS TCGA-N9-A4Q8 2 In-Frame Inter-chr q13.32 p36.11 16123 ChimerSeq FusionScan TCGA_RNA-Seq TM9SF4-DEFB123 TM9SF4 chr20 30742989 + DEFB123 chr20 30037831 + Exonic hg19 UCS TCGA-N8-A4PM 6 Out-of-Frame Intra-chr q11.21 q11.21 Seq+ 16124 ChimerSeq FusionScan TCGA_RNA-Seq PFDN1-DNMT3L PFDN1 chr5 139680000 - DNMT3L chr21 45666448 - Exonic hg19 UCS TCGA-N8-A4PM 3 In-Frame Inter-chr q31.3 q22.3 Seq+ 16125 ChimerSeq FusionScan TCGA_RNA-Seq ARNT-PI4KB ARNT chr1 150849018 - PI4KB chr1 151288985 - Exonic hg19 UCS TCGA-N8-A4PM 2 Out-of-Frame Intra-chr q21.3 Oncogene Transcription factor q21.3 16126 ChimerSeq FusionScan TCGA_RNA-Seq PFDN1-DNMT3L PFDN1 chr5 139680000 - DNMT3L chr21 45666445 - Exonic hg19 UCS TCGA-N8-A4PM 2 In-Frame Inter-chr q31.3 q22.3 Seq+ 16127 ChimerSeq FusionScan TCGA_RNA-Seq CDK16-TIMP1 CDK16 chrX 47078504 + TIMP1 chrX 47444603 + Exonic hg19 UCS TCGA-N5-A4RD 9 5'UTR-CDS Intra-chr p11.3 p11.3 Seq+ 16128 ChimerSeq FusionScan TCGA_RNA-Seq ZNF670-SMYD3 ZNF670 chr1 247241895 - SMYD3 chr1 246518396 - Exonic hg19 UCS TCGA-N5-A4RD 2 Out-of-Frame Intra-chr q44 Transcription factor q44 Transcription factor Seq+ 16129 ChimerSeq FusionScan TCGA_RNA-Seq CDK16-TIMP1 CDK16 chrX 47078063 + TIMP1 chrX 47444603 + Exonic hg19 UCS TCGA-N5-A4RD 2 In-Frame Intra-chr p11.3 p11.3 Seq+ 16130 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC17-SERINC2 ZCCHC17 chr1 31821821 + SERINC2 chr1 31883231 + Exonic hg19 UVM TCGA-WC-A87T 2 In-Frame Intra-chr p35.2 p35.2 16131 ChimerSeq FusionScan TCGA_RNA-Seq TYR-SET TYR chr11 88924586 + SET chr9 131453448 + Exonic hg19 UVM TCGA-VD-AA8T 2 In-Frame Inter-chr q14.3 q34.11 16132 ChimerSeq FusionScan TCGA_RNA-Seq SEPT9-BCAS3 SEPT9 chr17 75398785 + BCAS3 chr17 59445687 + Exonic hg19 UVM TCGA-WC-A884 6 In-Frame Intra-chr q23.2 Seq+ 16133 ChimerSeq FusionScan TCGA_RNA-Seq ZCCHC17-SERINC2 ZCCHC17 chr1 31821821 + SERINC2 chr1 31883231 + Exonic hg19 UVM TCGA-VD-AA8S 2 In-Frame Intra-chr p35.2 p35.2 16134 ChimerSeq FusionScan TCGA_RNA-Seq MMP17-NOC4L MMP17 chr12 132313198 + NOC4L chr12 132635525 + Exonic hg19 UVM TCGA-VD-AA8S 2 Out-of-Frame Intra-chr q24.33 q24.33 Seq+ 16135 ChimerSeq FusionScan TCGA_RNA-Seq NXF1-C11orf48 NXF1 chr11 62572800 - C11orf48 chr11 62430805 - Exonic hg19 UVM TCGA-VD-AA8S 2 Out-of-Frame Intra-chr q12.3 Seq+ 16136 ChimerSeq FusionScan TCGA_RNA-Seq TMEM200A-FYN TMEM200A chr6 130687669 + FYN chr6 112101838 - Exonic hg19 UVM TCGA-VD-A8KJ 4 5'UTR-5'UTR Intra-chr q23.1 q21 TK:Src Seq+ 16137 ChimerSeq FusionScan TCGA_RNA-Seq STX7-LMBRD1 STX7 chr6 132824584 - LMBRD1 chr6 70386433 - Exonic hg19 UVM TCGA-VD-A8KJ 4 In-Frame Intra-chr q23.2 q13 Seq+ 16138 ChimerSeq FusionScan TCGA_RNA-Seq FOXO3-ARMC2 FOXO3 chr6 108883032 + ARMC2 chr6 109215669 + Exonic hg19 UVM TCGA-VD-A8KJ 4 Out-of-Frame Intra-chr q21 Oncogene Tumor suppressor gene Transcription factor q21 Seq+ 16139 ChimerSeq FusionScan TCGA_RNA-Seq FYN-CDK19 FYN chr6 112101768 - CDK19 chr6 110935869 - Exonic hg19 UVM TCGA-VD-A8KJ 2 5'UTR-CDS Intra-chr q21 TK:Src q21 Seq+ 16140 ChimerSeq FusionScan TCGA_RNA-Seq RCC1-NARF RCC1 chr1 28832596 + NARF chr17 80443372 + Exonic hg19 UVM TCGA-VD-AA8M 2 5'UTR-CDS Inter-chr p35.3 q25.3 16141 ChimerSeq FusionScan TCGA_RNA-Seq BNIP2-ANXA2 BNIP2 chr15 59981333 - ANXA2 chr15 60656722 - Exonic hg19 UVM TCGA-VD-A8KB 2 Out-of-Frame Intra-chr q22.2 q22.2 16142 ChimerSeq FusionScan TCGA_RNA-Seq PON2-NUDC PON2 chr7 95045553 - NUDC chr1 27267947 + Exonic hg19 UVM TCGA-V4-A9EU 2 In-Frame Inter-chr q21.3 p36.11 16143 ChimerSeq FusionScan TCGA_RNA-Seq CD44-MRGPRD CD44 chr11 35240934 + MRGPRD chr11 68748455 - Exonic hg19 UVM TCGA-YZ-A984 6 CDS-5'UTR Intra-chr p13 Oncogene Tumor suppressor gene q13.3 16144 ChimerSeq FusionScan TCGA_RNA-Seq ADRBK2-TPST2 ADRBK2 chr22 25961120 + TPST2 chr22 26940641 - Exonic hg19 UVM TCGA-VD-A8KK 2 CDS-5'UTR Intra-chr q12.1 16145 ChimerSeq FusionScan TCGA_RNA-Seq SOCS6-DHRSX SOCS6 chr18 67956326 + DHRSX chrY 2293345 - Exonic hg19 UVM TCGA-VD-A8KM 2 5'UTR-CDS Inter-chr q22.2 p22.33 16146 ChimerSeq FusionScan TCGA_RNA-Seq GMPR-EXOC3 GMPR chr6 16254966 + EXOC3 chr5 464404 + Exonic hg19 UVM TCGA-WC-A885 2 In-Frame Inter-chr p22.3 p15.33 16147 ChimerSeq STARFusion TCGA_RNA-Seq THRAP3-MAP7D1 THRAP3 chr1 36690106 + MAP7D1 chr1 36645267 + Exonic hg19 ACC TCGA-OR-A5JZ-01A 34 116 5'UTR-CDS Intra-chr p34.3 p34.3 Seq+ 16148 ChimerSeq STARFusion TCGA_RNA-Seq C5orf56-CCDC101 C5orf56 chr5 131755632 + CCDC101 chr16 28592376 + Exonic hg19 ACC TCGA-OR-A5JZ-01A 11 33 5'UTR-5'UTR Inter-chr q31.1 Seq+ 16149 ChimerSeq STARFusion TCGA_RNA-Seq CRIP2-MTA1 CRIP2 chr14 105941242 + MTA1 chr14 105935804 + Exonic hg19 ACC TCGA-OR-A5JZ-01A 2 13 In-Frame Intra-chr q32.33 q32.33 Seq+ 16150 ChimerSeq STARFusion TCGA_RNA-Seq SPEF2-C5orf42 SPEF2 chr5 35659309 + C5orf42 chr5 37224435 - Exonic hg19 ACC TCGA-OR-A5JZ-01A 2 6 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 16151 ChimerSeq STARFusion TCGA_RNA-Seq SPEF2-C5orf42 SPEF2 chr5 35659309 + C5orf42 chr5 37224842 - Exonic hg19 ACC TCGA-OR-A5JZ-01A 2 6 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 16152 ChimerSeq STARFusion TCGA_RNA-Seq CYB5B-SNTB2 CYB5B chr16 69458760 + SNTB2 chr16 69333493 + Exonic hg19 ACC TCGA-OR-A5KX-01A 11 22 Out-of-frame Intra-chr q22.1 16153 ChimerSeq STARFusion TCGA_RNA-Seq NCKAP5L-BCDIN3D NCKAP5L chr12 50222105 - BCDIN3D chr12 50232798 - Exonic hg19 ACC TCGA-OR-A5KX-01A 8 23 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 16154 ChimerSeq STARFusion TCGA_RNA-Seq FN3KRP-KCNQ1 FN3KRP chr17 80684478 + KCNQ1 chr11 2868997 + Exonic hg19 ACC TCGA-OR-A5KX-01A 3 34 In-Frame Inter-chr q25.3 p15.5 Seq+ 16155 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP23-RPL23 ARHGAP23 chr17 36638919 + RPL23 chr17 37009358 - Exonic hg19 ACC TCGA-OR-A5KX-01A 6 21 Out-of-frame Intra-chr q12 q12 Seq+ 16156 ChimerSeq STARFusion TCGA_RNA-Seq PPP3R1-WDR92 PPP3R1 chr2 68479257 - WDR92 chr2 68371847 - Exonic hg19 ACC TCGA-OR-A5KX-01A 5 9 Out-of-frame Intra-chr p14 p14 Seq+ 16157 ChimerSeq STARFusion TCGA_RNA-Seq FKBP8-HAUS8 FKBP8 chr19 18652489 - HAUS8 chr19 17184145 - Exonic hg19 ACC TCGA-OR-A5KX-01A 4 9 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 16158 ChimerSeq STARFusion TCGA_RNA-Seq PPP3R1-C1D PPP3R1 chr2 68479257 - C1D chr2 68274451 - Exonic hg19 ACC TCGA-OR-A5KX-01A 3 5 CDS-5'UTR Intra-chr p14 p14 Seq+ 16159 ChimerSeq STARFusion TCGA_RNA-Seq DLST-YLPM1 DLST chr14 75361112 + YLPM1 chr14 75264283 + Exonic hg19 ACC TCGA-OR-A5KX-01A 2 2 In-Frame Intra-chr q24.3 q24.3 Seq+ 16160 ChimerSeq STARFusion TCGA_RNA-Seq LRRC8A-LOC100506100 LRRC8A chr9 131648400 + LOC100506100 chr9 131495121 + Exonic hg19 ACC TCGA-OR-A5JT-01A 11 29 5'UTR-5'UTR Intra-chr q34.11 16161 ChimerSeq STARFusion TCGA_RNA-Seq PHF20-SPAG4 PHF20 chr20 34487570 + SPAG4 chr20 34207117 + Exonic hg19 ACC TCGA-OR-A5JT-01A 9 36 In-Frame Intra-chr q11.22 Transcription factor q11.22 Seq+ 16162 ChimerSeq STARFusion TCGA_RNA-Seq ZNF341-C20orf144 ZNF341 chr20 32333105 + C20orf144 chr20 32251338 + Exonic hg19 ACC TCGA-OR-A5JT-01A 2 8 In-Frame Intra-chr q11.22 Transcription factor q11.22 Seq+ 16163 ChimerSeq STARFusion TCGA_RNA-Seq ABCA2-STXBP1 ABCA2 chr9 139922527 - STXBP1 chr9 130444685 + Exonic hg19 ACC TCGA-OR-A5JT-01A 2 1 Out-of-frame Intra-chr q34.3 q34.11 16164 ChimerSeq STARFusion TCGA_RNA-Seq FAM19A4-TMF1 FAM19A4 chr3 68929881 - TMF1 chr3 69097713 - Exonic hg19 ACC TCGA-OR-A5LB-01A 14 63 In-Frame Intra-chr p14.1 p14.1 Transcription factor Seq+ 16165 ChimerSeq STARFusion TCGA_RNA-Seq LMBR1-CHMP1A LMBR1 chr7 156516806 - CHMP1A chr16 89713739 - Exonic hg19 ACC TCGA-OR-A5LB-01A 2 1 In-Frame Inter-chr q36.3 q24.3 Seq+ 16166 ChimerSeq STARFusion TCGA_RNA-Seq TRAM2-HCRTR2 TRAM2 chr6 52441594 - HCRTR2 chr6 55142178 + Exonic hg19 ACC TCGA-P6-A5OG-01A 2 7 In-Frame Intra-chr p12.2 p12.1 Seq+ 16167 ChimerSeq STARFusion TCGA_RNA-Seq MBTPS1-SLC38A8 MBTPS1 chr16 84150340 - SLC38A8 chr16 84050332 - Exonic hg19 ACC TCGA-OR-A5K0-01A 35 76 5'UTR-CDS Intra-chr q24.1 q23.3 Seq+ 16168 ChimerSeq STARFusion TCGA_RNA-Seq CNST-SCCPDH CNST chr1 246755243 + SCCPDH chr1 246927548 + Exonic hg19 ACC TCGA-OR-A5K0-01A 4 118 Out-of-frame Intra-chr q44 q44 16169 ChimerSeq STARFusion TCGA_RNA-Seq CNST-SCCPDH CNST chr1 246755243 + SCCPDH chr1 246929360 + Exonic hg19 ACC TCGA-OR-A5K0-01A 2 118 In-Frame Intra-chr q44 q44 16170 ChimerSeq STARFusion TCGA_RNA-Seq BAZ2B-WDSUB1 BAZ2B chr2 160335086 - WDSUB1 chr2 160116354 - Exonic hg19 ACC TCGA-OR-A5K0-01A 4 40 Out-of-frame Intra-chr q24.2 Transcription factor q24.2 16171 ChimerSeq STARFusion TCGA_RNA-Seq SYNJ2-COX4I1 SYNJ2 chr6 158489760 + COX4I1 chr16 85840433 + Exonic hg19 ACC TCGA-OR-A5KO-01A 4 4 Out-of-frame Inter-chr q25.3 q24.1 Seq+ 16172 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K9-MED6 MAP3K9 chr14 71216650 - MED6 chr14 71060095 - Exonic hg19 ACC TCGA-OR-A5LG-01A 3 33 In-Frame Intra-chr q24.2 q24.2 Seq+ 16173 ChimerSeq STARFusion TCGA_RNA-Seq MED6-MAP3K9 MED6 chr14 71063328 - MAP3K9 chr14 71227899 - Exonic hg19 ACC TCGA-OR-A5LG-01A 2 22 In-Frame Intra-chr q24.2 q24.2 Seq+ 16174 ChimerSeq STARFusion TCGA_RNA-Seq WIBG-SLC16A7 WIBG chr12 56297171 - SLC16A7 chr12 60173204 + Exonic hg19 ACC TCGA-OR-A5KT-01A 18 80 Out-of-frame Intra-chr 12q13.2 q14.1 Seq+ 16175 ChimerSeq STARFusion TCGA_RNA-Seq SLC16A7-SARNP SLC16A7 chr12 59990017 + SARNP chr12 56154424 - Exonic hg19 ACC TCGA-OR-A5KT-01A 15 28 5'UTR-CDS Intra-chr q14.1 q13.2 Seq+ 16176 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB38-C17orf64 ZBTB38 chr3 141088788 + C17orf64 chr17 58508542 + Exonic hg19 ACC TCGA-OR-A5JK-01A 2 15 5'UTR-CDS Inter-chr q23 Transcription factor q23.2 Seq+ 16177 ChimerSeq STARFusion TCGA_RNA-Seq GNPTG-UBE2I GNPTG chr16 1402307 + UBE2I chr16 1370175 + Exonic hg19 ACC TCGA-OR-A5JK-01A 2 1 In-Frame Intra-chr p13.3 p13.3 16178 ChimerSeq STARFusion TCGA_RNA-Seq TMSB15B-H2BFXP TMSB15B chrX 103219195 + H2BFXP chrX 103316442 - Exonic hg19 ACC TCGA-OR-A5JK-01A 2 0 CDS-3'UTR Intra-chr q22.2 16179 ChimerSeq STARFusion TCGA_RNA-Seq GANAB-C11orf48 GANAB chr11 62407099 - C11orf48 chr11 62430805 - Exonic hg19 ACC TCGA-OR-A5LD-01A 20 218 Out-of-frame Intra-chr q12.3 Tumor suppressor gene Seq+ 16180 ChimerSeq STARFusion TCGA_RNA-Seq GANAB-C11orf48 GANAB chr11 62414034 - C11orf48 chr11 62430805 - Exonic hg19 ACC TCGA-OR-A5LD-01A 4 218 Out-of-frame Intra-chr q12.3 Tumor suppressor gene Seq+ 16181 ChimerSeq STARFusion TCGA_RNA-Seq ZXDC-UROC1 ZXDC chr3 126184998 - UROC1 chr3 126201328 - Exonic hg19 ACC TCGA-OR-A5LD-01A 3 10 Out-of-frame Intra-chr q21.3 Transcription factor q21.3 Seq+ 16182 ChimerSeq STARFusion TCGA_RNA-Seq ZNF3-MCM7 ZNF3 chr7 99672758 - MCM7 chr7 99697026 - Exonic hg19 ACC TCGA-OR-A5LD-01A 3 2 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 16183 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1G2-ADAT3 CSNK1G2 chr19 1969958 + ADAT3 chr19 1911889 + Exonic hg19 ACC TCGA-OR-A5LD-01A 2 1 CDS-5'UTR Intra-chr p13.3 p13.3 16184 ChimerSeq STARFusion TCGA_RNA-Seq SETX-RAB14 SETX chr9 135230304 - RAB14 chr9 123955697 - Exonic hg19 ACC TCGA-OR-A5JE-01A 7 18 5'UTR-5'UTR Intra-chr q34.13 q33.2 Seq+ 16185 ChimerSeq STARFusion TCGA_RNA-Seq NSD1-ZNF346 NSD1 chr5 176563031 + ZNF346 chr5 176489059 + Exonic hg19 ACC TCGA-OR-A5JE-01A 2 17 Out-of-frame Intra-chr q35.3 Oncogene q35.2 Transcription factor Seq+ 16186 ChimerSeq STARFusion TCGA_RNA-Seq NSD1-ZNF346 NSD1 chr5 176563031 + ZNF346 chr5 176477752 + Exonic hg19 ACC TCGA-OR-A5JE-01A 2 17 Out-of-frame Intra-chr q35.3 Oncogene q35.2 Transcription factor Seq+ 16187 ChimerSeq STARFusion TCGA_RNA-Seq LOC100133985-C2orf42 LOC100133985 chr2 70352178 - C2orf42 chr2 70377696 - Exonic hg19 ACC TCGA-OR-A5L4-01A 3 1 3'UTR-CDS Intra-chr p13.3 16188 ChimerSeq STARFusion TCGA_RNA-Seq YPEL3-EXD3 YPEL3 chr16 30106573 - EXD3 chr9 140218595 - Exonic hg19 ACC TCGA-P6-A5OF-01A 25 125 In-Frame Inter-chr p11.2 Tumor suppressor gene q34.3 Seq+ 16189 ChimerSeq STARFusion TCGA_RNA-Seq DCP2-IL17B DCP2 chr5 112328467 + IL17B chr5 148756588 - Exonic hg19 ACC TCGA-P6-A5OF-01A 8 23 In-Frame Intra-chr q22.2 q32 Seq+ 16190 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-TSC2 GNB1 chr1 1770629 - TSC2 chr16 2129033 + Exonic hg19 ACC TCGA-P6-A5OF-01A 5 17 5'UTR-CDS Inter-chr p36.33 p13.3 Oncogene Tumor suppressor gene Seq+ 16191 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-TSC2 GNB1 chr1 1770629 - TSC2 chr16 2129036 + Exonic hg19 ACC TCGA-P6-A5OF-01A 2 17 5'UTR-CDS Inter-chr p36.33 p13.3 Oncogene Tumor suppressor gene Seq+ 16192 ChimerSeq STARFusion TCGA_RNA-Seq AHDC1-FGR AHDC1 chr1 27929908 - FGR chr1 27951662 - Exonic hg19 ACC TCGA-P6-A5OF-01A 3 12 5'UTR-5'UTR Intra-chr p35.3 Transcription factor p35.3 TK:Src 16193 ChimerSeq STARFusion TCGA_RNA-Seq KBTBD2-DPY19L1P1 KBTBD2 chr7 32914604 - DPY19L1P1 chr7 32678977 - Exonic hg19 ACC TCGA-P6-A5OF-01A 3 10 CDS-3'UTR Intra-chr p14.3 p14.3 16194 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KA4-CCDC88B RPS6KA4 chr11 64132937 + CCDC88B chr11 64116803 + Exonic hg19 ACC TCGA-P6-A5OF-01A 2 11 In-Frame Intra-chr q13.1 q13.1 Seq+ 16195 ChimerSeq STARFusion TCGA_RNA-Seq RASSF8-SSPN RASSF8 chr12 26208379 + SSPN chr12 26377226 + Exonic hg19 ACC TCGA-P6-A5OF-01A 2 5 Out-of-frame Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 16196 ChimerSeq STARFusion TCGA_RNA-Seq TTLL5-IFT43 TTLL5 chr14 76349245 + IFT43 chr14 76455228 + Exonic hg19 ACC TCGA-P6-A5OF-01A 2 3 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 16197 ChimerSeq STARFusion TCGA_RNA-Seq ASB4-DYNC1I1 ASB4 chr7 95165862 + DYNC1I1 chr7 95434033 + Exonic hg19 ACC TCGA-P6-A5OF-01A 2 2 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 16198 ChimerSeq STARFusion TCGA_RNA-Seq LOC100130691-NFE2L2 LOC100130691 chr2 178199121 - NFE2L2 chr2 178098999 - Exonic hg19 ACC TCGA-P6-A5OF-01A 2 2 3'UTR-CDS Intra-chr q31.2 Oncogene Transcription factor 16199 ChimerSeq STARFusion TCGA_RNA-Seq FAM19A4-FRMD4B FAM19A4 chr3 68981391 - FRMD4B chr3 69271074 - Exonic hg19 ACC TCGA-P6-A5OF-01A 2 1 5'UTR-CDS Intra-chr p14.1 p14.1 16200 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD52-RASSF3 ANKRD52 chr12 56637022 - RASSF3 chr12 65085250 + Exonic hg19 ACC TCGA-OR-A5K9-01A 6 39 In-Frame Intra-chr q13.3 q14.2 Tumor suppressor gene Seq+ 16201 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD52-RASSF3 ANKRD52 chr12 56637022 - RASSF3 chr12 65081996 + Exonic hg19 ACC TCGA-OR-A5K9-01A 3 39 Out-of-frame Intra-chr q13.3 q14.2 Tumor suppressor gene Seq+ 16202 ChimerSeq STARFusion TCGA_RNA-Seq FAM19A2-IKZF4 FAM19A2 chr12 62585040 - IKZF4 chr12 56418838 + Exonic hg19 ACC TCGA-OR-A5K9-01A 2 6 5'UTR-CDS Intra-chr q14.1 q13.2 Transcription factor Seq+ 16203 ChimerSeq STARFusion TCGA_RNA-Seq PXN-PLA2G1B PXN chr12 120703420 - PLA2G1B chr12 120763823 - Exonic hg19 ACC TCGA-OR-A5LO-01A 133 137 In-Frame Intra-chr q24.23 q24.31 Seq+ 16204 ChimerSeq STARFusion TCGA_RNA-Seq CELF1-FNBP4 CELF1 chr11 47505005 - FNBP4 chr11 47741638 - Exonic hg19 ACC TCGA-OR-A5LO-01A 18 123 In-Frame Intra-chr p11.2 p11.2 Seq+ 16205 ChimerSeq STARFusion TCGA_RNA-Seq QRICH1-ACOT2 QRICH1 chr3 49114142 - ACOT2 chr14 74041612 + Exonic hg19 ACC TCGA-OR-A5LO-01A 5 146 In-Frame Inter-chr p21.31 q24.3 Seq+ 16206 ChimerSeq STARFusion TCGA_RNA-Seq FCN2-COL5A1 FCN2 chr9 137778410 + COL5A1 chr9 137714844 + Exonic hg19 ACC TCGA-OR-A5LO-01A 12 42 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 16207 ChimerSeq STARFusion TCGA_RNA-Seq MINOS1-GSE1 MINOS1 chr1 19923603 + GSE1 chr16 85699582 + Exonic hg19 ACC TCGA-OR-A5LO-01A 11 28 Out-of-frame Inter-chr p36.13 q24.1 Seq+ 16208 ChimerSeq STARFusion TCGA_RNA-Seq SMURF1-LOC100507412 SMURF1 chr7 98741349 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 ACC TCGA-OR-A5LO-01A 8 38 CDS-5'UTR Inter-chr 16209 ChimerSeq STARFusion TCGA_RNA-Seq RAB40C-C16orf11 RAB40C chr16 668260 + C16orf11 chr16 613256 + Exonic hg19 ACC TCGA-OR-A5LO-01A 2 61 CDS-5'UTR Intra-chr p13.3 Seq+ 16210 ChimerSeq STARFusion TCGA_RNA-Seq PGPEP1-ALPL PGPEP1 chr19 18453721 + ALPL chr1 21880471 + Exonic hg19 ACC TCGA-OR-A5LO-01A 7 40 CDS-5'UTR Inter-chr p13.11 p36.12 Tumor suppressor gene Seq+ 16211 ChimerSeq STARFusion TCGA_RNA-Seq RASSF3-DAZAP2 RASSF3 chr12 65004523 + DAZAP2 chr12 51634127 + Exonic hg19 ACC TCGA-OR-A5LO-01A 4 21 Out-of-frame Intra-chr q14.2 Tumor suppressor gene q13.13 Seq+ 16212 ChimerSeq STARFusion TCGA_RNA-Seq CYB5B-LOC100506083 CYB5B chr16 69493024 + LOC100506083 chr16 70367863 - Exonic hg19 ACC TCGA-OR-A5LO-01A 3 14 CDS-3'UTR Intra-chr q22.1 16213 ChimerSeq STARFusion TCGA_RNA-Seq FOXO3-LACE1 FOXO3 chr6 108883032 + LACE1 chr6 108840900 + Exonic hg19 ACC TCGA-OR-A5LO-01A 3 11 In-Frame Intra-chr q21 Oncogene Tumor suppressor gene Transcription factor Seq+ 16214 ChimerSeq STARFusion TCGA_RNA-Seq CYB5B-LOC100506083 CYB5B chr16 69482047 + LOC100506083 chr16 70367863 - Exonic hg19 ACC TCGA-OR-A5LO-01A 2 14 CDS-3'UTR Intra-chr q22.1 16215 ChimerSeq STARFusion TCGA_RNA-Seq GBF1-NOLC1 GBF1 chr10 104130617 + NOLC1 chr10 103918950 + Exonic hg19 ACC TCGA-OR-A5LO-01A 3 8 Out-of-frame Intra-chr q24.32 q24.32 Seq+ 16216 ChimerSeq STARFusion TCGA_RNA-Seq WRAP53-AHCY WRAP53 chr17 7593019 + AHCY chr20 32868971 - Exonic hg19 ACC TCGA-OR-A5LO-01A 2 11 In-Frame Inter-chr p13.1 q11.22 Seq+ 16217 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF3-EMID1 ZNRF3 chr22 29280054 + EMID1 chr22 29610915 + Exonic hg19 ACC TCGA-OR-A5LO-01A 2 8 Out-of-frame Intra-chr q12.1 q12.2 Seq+ 16218 ChimerSeq STARFusion TCGA_RNA-Seq CMIP-BCMO1 CMIP chr16 81479146 + BCMO1 chr16 81279080 + Exonic hg19 ACC TCGA-OR-A5LO-01A 2 6 Out-of-frame Intra-chr q23.2 Seq+ 16219 ChimerSeq STARFusion TCGA_RNA-Seq REPS2-TXLNG REPS2 chrX 17024467 + TXLNG chrX 16836697 + Exonic hg19 ACC TCGA-OR-A5LO-01A 2 4 Out-of-frame Intra-chr p22.2 p22.2 Seq+ 16220 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 ACC TCGA-OR-A5LO-01A 2 4 CDS-5'UTR Intra-chr p12 p12 Transcription factor 16221 ChimerSeq STARFusion TCGA_RNA-Seq MRPL33-GPN1 MRPL33 chr2 27995559 + GPN1 chr2 27852726 + Exonic hg19 ACC TCGA-OR-A5LO-01A 2 2 Out-of-frame Intra-chr p23.2 p23.3 16222 ChimerSeq STARFusion TCGA_RNA-Seq ASXL2-PPWD1 ASXL2 chr2 26029098 - PPWD1 chr5 64872706 + Exonic hg19 ACC TCGA-OR-A5J2-01A 2 16 In-Frame Inter-chr p23.3 q12.3 Seq+ 16223 ChimerSeq STARFusion TCGA_RNA-Seq ERN1-TEX2 ERN1 chr17 62141346 - TEX2 chr17 62238293 - Exonic hg19 ACC TCGA-OR-A5K6-01A 26 236 In-Frame Intra-chr q23.3 q23.3 Seq+ 16224 ChimerSeq STARFusion TCGA_RNA-Seq GPR98-CLPTM1L GPR98 chr5 90281339 + CLPTM1L chr5 1318568 - Exonic hg19 ACC TCGA-OR-A5JV-01A 52 246 In-Frame Intra-chr p15.33 Seq+ 16225 ChimerSeq STARFusion TCGA_RNA-Seq DLK1-C1QB DLK1 chr14 101198516 + C1QB chr1 22987904 + Exonic hg19 ACC TCGA-OR-A5JV-01A 5 5 Out-of-frame Inter-chr q32.2 Tumor suppressor gene p36.12 16226 ChimerSeq STARFusion TCGA_RNA-Seq KIF1B-FAM58A KIF1B chr1 10292492 + FAM58A chrX 152861645 - Exonic hg19 ACC TCGA-OR-A5J7-01A 50 448 In-Frame Inter-chr p36.22 Tumor suppressor gene q28 Seq+ 16227 ChimerSeq STARFusion TCGA_RNA-Seq FLVCR2-BATF FLVCR2 chr14 76045984 + BATF chr14 76012805 + Exonic hg19 ACC TCGA-OR-A5J7-01A 49 328 In-Frame Intra-chr q24.3 q24.3 Transcription factor Seq+ 16228 ChimerSeq STARFusion TCGA_RNA-Seq PRX-BLVRB PRX chr19 40904527 - BLVRB chr19 40953953 - Exonic hg19 ACC TCGA-OR-A5J7-01A 54 162 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 16229 ChimerSeq STARFusion TCGA_RNA-Seq HSD17B14-PLEKHA4 HSD17B14 chr19 49335923 - PLEKHA4 chr19 49344567 - Exonic hg19 ACC TCGA-OR-A5J7-01A 38 195 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 16230 ChimerSeq STARFusion TCGA_RNA-Seq PDXK-RRP1B PDXK chr21 45178423 + RRP1B chr21 45114774 + Exonic hg19 ACC TCGA-OR-A5J7-01A 32 131 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 16231 ChimerSeq STARFusion TCGA_RNA-Seq HSD17B14-PLEKHA4 HSD17B14 chr19 49337533 - PLEKHA4 chr19 49344567 - Exonic hg19 ACC TCGA-OR-A5J7-01A 10 195 In-Frame Intra-chr q13.33 q13.33 Seq+ 16232 ChimerSeq STARFusion TCGA_RNA-Seq IFNAR1-IL10RB IFNAR1 chr21 34697436 + IL10RB chr21 34660409 + Exonic hg19 ACC TCGA-OR-A5J7-01A 24 124 In-Frame Intra-chr q22.11 q22.11 Seq+ 16233 ChimerSeq STARFusion TCGA_RNA-Seq HSD17B14-PLEKHA4 HSD17B14 chr19 49335923 - PLEKHA4 chr19 49341386 - Exonic hg19 ACC TCGA-OR-A5J7-01A 4 195 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 16234 ChimerSeq STARFusion TCGA_RNA-Seq ASPSCR1-HGS ASPSCR1 chr17 79943483 + HGS chr17 79667497 + Exonic hg19 ACC TCGA-OR-A5J7-01A 25 93 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 16235 ChimerSeq STARFusion TCGA_RNA-Seq AP2A2-DRD4 AP2A2 chr11 977224 + DRD4 chr11 640401 + Exonic hg19 ACC TCGA-OR-A5J7-01A 12 128 Out-of-frame Intra-chr p15.5 p15.5 Seq+ 16236 ChimerSeq STARFusion TCGA_RNA-Seq AP2A2-DRD4 AP2A2 chr11 977224 + DRD4 chr11 639433 + Exonic hg19 ACC TCGA-OR-A5J7-01A 12 128 In-Frame Intra-chr p15.5 p15.5 Seq+ 16237 ChimerSeq STARFusion TCGA_RNA-Seq SCMH1-CA6 SCMH1 chr1 41499655 - CA6 chr1 9009322 + Exonic hg19 ACC TCGA-OR-A5J7-01A 19 82 In-Frame Intra-chr p34.2 Transcription factor p36.23 Seq+ 16238 ChimerSeq STARFusion TCGA_RNA-Seq SCYL1-LOC100506083 SCYL1 chr11 65300276 + LOC100506083 chr16 70351276 - Exonic hg19 ACC TCGA-OR-A5J7-01A 10 107 CDS-3'UTR Inter-chr q13.1 Other:SCY1 Tumor suppressor gene 16239 ChimerSeq STARFusion TCGA_RNA-Seq RAF1-TMEM40 RAF1 chr3 12705312 - TMEM40 chr3 12784006 - Exonic hg19 ACC TCGA-OR-A5J7-01A 13 93 5'UTR-CDS Intra-chr p25.2 TKL:RAF Oncogene p25.2 Seq+ 16240 ChimerSeq STARFusion TCGA_RNA-Seq SCYL1-LOC100506083 SCYL1 chr11 65300276 + LOC100506083 chr16 70350045 - Exonic hg19 ACC TCGA-OR-A5J7-01A 8 107 CDS-3'UTR Inter-chr q13.1 Other:SCY1 Tumor suppressor gene 16241 ChimerSeq STARFusion TCGA_RNA-Seq KBTBD2-RP9P KBTBD2 chr7 32931148 - RP9P chr7 32973508 - Exonic hg19 ACC TCGA-OR-A5J7-01A 15 72 5'UTR-3'UTR Intra-chr p14.3 p14.3 16242 ChimerSeq STARFusion TCGA_RNA-Seq SCYL1-LOC100506083 SCYL1 chr11 65299154 + LOC100506083 chr16 70351276 - Exonic hg19 ACC TCGA-OR-A5J7-01A 4 107 CDS-3'UTR Inter-chr q13.1 Other:SCY1 Tumor suppressor gene 16243 ChimerSeq STARFusion TCGA_RNA-Seq SCYL1-LOC100506083 SCYL1 chr11 65299154 + LOC100506083 chr16 70350045 - Exonic hg19 ACC TCGA-OR-A5J7-01A 2 107 CDS-3'UTR Inter-chr q13.1 Other:SCY1 Tumor suppressor gene 16244 ChimerSeq STARFusion TCGA_RNA-Seq RAB11FIP3-NME4 RAB11FIP3 chr16 511497 + NME4 chr16 448990 + Exonic hg19 ACC TCGA-OR-A5J7-01A 11 68 In-Frame Intra-chr p13.3 16245 ChimerSeq STARFusion TCGA_RNA-Seq SCMH1-CA6 SCMH1 chr1 41503034 - CA6 chr1 9009322 + Exonic hg19 ACC TCGA-OR-A5J7-01A 7 82 In-Frame Intra-chr p34.2 Transcription factor p36.23 Seq+ 16246 ChimerSeq STARFusion TCGA_RNA-Seq RAF1-TMEM40 RAF1 chr3 12705312 - TMEM40 chr3 12785488 - Exonic hg19 ACC TCGA-OR-A5J7-01A 3 93 5'UTR-CDS Intra-chr p25.2 TKL:RAF Oncogene p25.2 Seq+ 16247 ChimerSeq STARFusion TCGA_RNA-Seq KBTBD2-RP9P KBTBD2 chr7 32931148 - RP9P chr7 32969720 - Exonic hg19 ACC TCGA-OR-A5J7-01A 7 72 5'UTR-3'UTR Intra-chr p14.3 p14.3 16248 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK5-ALDH2 MAPKAPK5 chr12 112280573 + ALDH2 chr12 112241663 + Exonic hg19 ACC TCGA-OR-A5J7-01A 9 57 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 Seq+ 16249 ChimerSeq STARFusion TCGA_RNA-Seq PEBP1-DENND4B PEBP1 chr12 118577356 + DENND4B chr1 153908664 - Exonic hg19 ACC TCGA-OR-A5J7-01A 4 75 Out-of-frame Inter-chr q24.23 Tumor suppressor gene q21.3 Seq+ 16250 ChimerSeq STARFusion TCGA_RNA-Seq KBTBD2-RP9P KBTBD2 chr7 32931148 - RP9P chr7 32961042 - Exonic hg19 ACC TCGA-OR-A5J7-01A 4 72 5'UTR-3'UTR Intra-chr p14.3 p14.3 16251 ChimerSeq STARFusion TCGA_RNA-Seq NR5A1-NR6A1 NR5A1 chr9 127262369 - NR6A1 chr9 127287152 - Exonic hg19 ACC TCGA-OR-A5J7-01A 5 43 Out-of-frame Intra-chr q33.3 Transcription factor q33.3 Transcription factor Seq+ 16252 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1G1-CS CSNK1G1 chr15 64648187 - CS chr12 56680429 - Exonic hg19 ACC TCGA-OR-A5J7-01A 4 40 5'UTR-CDS Inter-chr q22.31 q13.3 Seq+ 16253 ChimerSeq STARFusion TCGA_RNA-Seq GTF2I-FLAD1 GTF2I chr7 74072394 + FLAD1 chr1 154960581 + Exonic hg19 ACC TCGA-OR-A5J7-01A 7 28 5'UTR-CDS Inter-chr q11.23 Transcription factor q21.3 Seq+ 16254 ChimerSeq STARFusion TCGA_RNA-Seq KDM4B-CCDC94 KDM4B chr19 5047680 + CCDC94 chr19 4247116 + Exonic hg19 ACC TCGA-OR-A5J7-01A 8 23 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 16255 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L1-NPEPPS NFE2L1 chr17 46125824 + NPEPPS chr17 45673719 + Exonic hg19 ACC TCGA-OR-A5J7-01A 10 15 5'UTR-CDS Intra-chr q21.32 Transcription factor q21.32 Seq+ 16256 ChimerSeq STARFusion TCGA_RNA-Seq GTF2I-FLAD1 GTF2I chr7 74072394 + FLAD1 chr1 154965041 + Exonic hg19 ACC TCGA-OR-A5J7-01A 3 28 5'UTR-CDS Inter-chr q11.23 Transcription factor q21.3 Seq+ 16257 ChimerSeq STARFusion TCGA_RNA-Seq PGAP1-HSPD1 PGAP1 chr2 197750148 - HSPD1 chr2 198362116 - Exonic hg19 ACC TCGA-OR-A5J7-01A 5 16 In-Frame Intra-chr q33.1 q33.1 Tumor suppressor gene Seq+ 16258 ChimerSeq STARFusion TCGA_RNA-Seq RCOR1-PPP2R5C RCOR1 chr14 103148315 + PPP2R5C chr14 102323023 + Exonic hg19 ACC TCGA-OR-A5J7-01A 3 21 In-Frame Intra-chr q32.31 q32.31 Tumor suppressor gene Seq+ 16259 ChimerSeq STARFusion TCGA_RNA-Seq SCD5-SEC31A SCD5 chr4 83719459 - SEC31A chr4 83765662 - Exonic hg19 ACC TCGA-OR-A5J7-01A 4 16 Out-of-frame Intra-chr q21.22 q21.22 Seq+ 16260 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-TULP2 SBNO2 chr19 1174171 - TULP2 chr19 49392888 - Exonic hg19 ACC TCGA-OR-A5J7-01A 4 9 5'UTR-CDS Intra-chr p13.3 q13.33 Seq+ 16261 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-SLC25A17 MKL1 chr22 40859225 - SLC25A17 chr22 41175129 - Exonic hg19 ACC TCGA-OR-A5J7-01A 3 10 In-Frame Intra-chr q13.2 q13.2 Seq+ 16262 ChimerSeq STARFusion TCGA_RNA-Seq ELMSAN1-ALDH6A1 ELMSAN1 chr14 74253805 - ALDH6A1 chr14 74541720 - Exonic hg19 ACC TCGA-OR-A5J7-01A 2 12 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 16263 ChimerSeq STARFusion TCGA_RNA-Seq HEG1-SLC12A8 HEG1 chr3 124774419 - SLC12A8 chr3 124839530 - Exonic hg19 ACC TCGA-OR-A5J7-01A 3 7 In-Frame Intra-chr q21.2 q21.2 Seq+ 16264 ChimerSeq STARFusion TCGA_RNA-Seq EXOSC10-MTOR EXOSC10 chr1 11139768 - MTOR chr1 11190834 - Exonic hg19 ACC TCGA-OR-A5J7-01A 2 9 In-Frame Intra-chr p36.22 p36.22 Oncogene Seq+ 16265 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-SNTB2 NFAT5 chr16 69600277 + SNTB2 chr16 69279505 + Exonic hg19 ACC TCGA-OR-A5J7-01A 4 1 In-Frame Intra-chr q22.1 Transcription factor Seq+ 16266 ChimerSeq STARFusion TCGA_RNA-Seq CCAR1-TET1 CCAR1 chr10 70520949 + TET1 chr10 70432652 + Exonic hg19 ACC TCGA-OR-A5J7-01A 3 4 Out-of-frame Intra-chr q21.3 Tumor suppressor gene q21.3 Oncogene Transcription factor Seq+ 16267 ChimerSeq STARFusion TCGA_RNA-Seq AS3MT-SUFU AS3MT chr10 104650435 + SUFU chr10 104356897 + Exonic hg19 ACC TCGA-OR-A5J7-01A 2 7 In-Frame Intra-chr q24.32 q24.32 Oncogene Tumor suppressor gene Seq+ 16268 ChimerSeq STARFusion TCGA_RNA-Seq CYP17A1-ANXA2 CYP17A1 chr10 104591265 - ANXA2 chr15 60643450 - Exonic hg19 ACC TCGA-OR-A5J7-01A 2 3 In-Frame Inter-chr q24.32 q22.2 16269 ChimerSeq STARFusion TCGA_RNA-Seq MANBA-UBE2D3 MANBA chr4 103571694 - UBE2D3 chr4 103723795 - Exonic hg19 ACC TCGA-OR-A5J7-01A 2 2 In-Frame Intra-chr q24 q24 16270 ChimerSeq STARFusion TCGA_RNA-Seq KCNQ1-DUSP8 KCNQ1 chr11 2799267 + DUSP8 chr11 1587164 - Exonic hg19 ACC TCGA-PA-A5YG-01A 11 73 5'UTR-5'UTR Intra-chr p15.5 Seq+ 16271 ChimerSeq STARFusion TCGA_RNA-Seq MARK2-COX4I1 MARK2 chr11 63676372 + COX4I1 chr16 85834808 + Exonic hg19 ACC TCGA-PA-A5YG-01A 3 1 Out-of-frame Inter-chr q13.1 CAMK:CAMKL q24.1 16272 ChimerSeq STARFusion TCGA_RNA-Seq EEF2-NRXN2 EEF2 chr19 3979830 - NRXN2 chr11 64416337 - Exonic hg19 ACC TCGA-OR-A5L8-01A 5 1 Out-of-frame Inter-chr p13.3 q13.1 16273 ChimerSeq STARFusion TCGA_RNA-Seq FLJ43663-MKLN1 FLJ43663 chr7 130792479 - MKLN1 chr7 131096065 + Exonic hg19 ACC TCGA-OR-A5L8-01A 2 1 3'UTR-CDS Intra-chr q32.3 16274 ChimerSeq STARFusion TCGA_RNA-Seq PPIP5K1-CATSPER2 PPIP5K1 chr15 43857065 - CATSPER2 chr15 43924561 - Exonic hg19 ACC TCGA-PK-A5H8-01A 2 3 In-Frame Intra-chr q15.3 q15.3 16275 ChimerSeq STARFusion TCGA_RNA-Seq PLBD2-CIDEC PLBD2 chr12 113796695 + CIDEC chr3 9920195 - Exonic hg19 ACC TCGA-OR-A5L6-01A 25 95 In-Frame Inter-chr q24.13 p25.3 Seq+ 16276 ChimerSeq STARFusion TCGA_RNA-Seq CLK1-NAPRT1 CLK1 chr2 201719339 - NAPRT1 chr8 144660113 - Exonic hg19 ACC TCGA-OR-A5L6-01A 11 82 Out-of-frame Inter-chr q33.1 CMGC:CLK Seq+ 16277 ChimerSeq STARFusion TCGA_RNA-Seq AMBRA1-HARBI1 AMBRA1 chr11 46615378 - HARBI1 chr11 46625459 - Exonic hg19 ACC TCGA-OR-A5L6-01A 2 6 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 16278 ChimerSeq STARFusion TCGA_RNA-Seq TAF6L-PCYT1A TAF6L chr11 62538962 + PCYT1A chr3 195969511 - Exonic hg19 ACC TCGA-OR-A5JM-01A 12 20 5'UTR-CDS Inter-chr q12.3 q29 Seq+ 16279 ChimerSeq STARFusion TCGA_RNA-Seq HDAC7-VDR HDAC7 chr12 48213550 - VDR chr12 48258960 - Exonic hg19 ACC TCGA-OR-A5JM-01A 2 27 Out-of-frame Intra-chr q13.11 q13.11 Tumor suppressor gene Transcription factor Seq+ 16280 ChimerSeq STARFusion TCGA_RNA-Seq SCARB2-SGMS1 SCARB2 chr4 77134580 - SGMS1 chr10 52104105 - Exonic hg19 ACC TCGA-OR-A5JM-01A 3 15 CDS-5'UTR Inter-chr q21.1 q11.23 Tumor suppressor gene Seq+ 16281 ChimerSeq STARFusion TCGA_RNA-Seq AHCYL2-REN AHCYL2 chr7 128865280 + REN chr1 204131291 - Exonic hg19 ACC TCGA-OR-A5JM-01A 3 2 Out-of-frame Inter-chr q32.1 q32.1 Seq+ 16282 ChimerSeq STARFusion TCGA_RNA-Seq LIN7A-R3HDM2 LIN7A chr12 81205244 - R3HDM2 chr12 57704246 - Exonic hg19 ACC TCGA-OR-A5JM-01A 3 1 3'UTR-5'UTR Intra-chr q21.31 q13.3 Seq+ 16283 ChimerSeq STARFusion TCGA_RNA-Seq GANAB-C11orf48 GANAB chr11 62414034 - C11orf48 chr11 62432445 - Exonic hg19 ACC TCGA-OR-A5LS-01A 57 12 Out-of-frame Intra-chr q12.3 Tumor suppressor gene Seq+ 16284 ChimerSeq STARFusion TCGA_RNA-Seq IL6R-TDRD10 IL6R chr1 154407632 + TDRD10 chr1 154519885 + Exonic hg19 ACC TCGA-OR-A5LS-01A 2 20 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 16285 ChimerSeq STARFusion TCGA_RNA-Seq LOC338799-HEXDC LOC338799 chr12 122239613 - HEXDC chr17 80398873 + Exonic hg19 ACC TCGA-OR-A5J1-01A 51 250 3'UTR-CDS Inter-chr q25.3 16286 ChimerSeq STARFusion TCGA_RNA-Seq PRLR-CLPTM1L PRLR chr5 35230370 - CLPTM1L chr5 1318568 - Exonic hg19 ACC TCGA-OR-A5J1-01A 22 103 5'UTR-CDS Intra-chr p13.2 p15.33 Seq+ 16287 ChimerSeq STARFusion TCGA_RNA-Seq KCTD5-TSC2 KCTD5 chr16 2747998 + TSC2 chr16 2136194 + Exonic hg19 ACC TCGA-OR-A5J1-01A 24 59 In-Frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Seq+ 16288 ChimerSeq STARFusion TCGA_RNA-Seq DAB2-ARSB DAB2 chr5 39392467 - ARSB chr5 78265015 - Exonic hg19 ACC TCGA-OR-A5J1-01A 13 59 In-Frame Intra-chr p13.1 Tumor suppressor gene q14.1 Seq+ 16289 ChimerSeq STARFusion TCGA_RNA-Seq NCAPD2-MRPL48 NCAPD2 chr12 6603320 + MRPL48 chr11 73516072 + Exonic hg19 ACC TCGA-OR-A5J1-01A 24 8 5'UTR-CDS Inter-chr p13.31 q13.4 Seq+ 16290 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R2-APOD PPP1R2 chr3 195269727 - APOD chr3 195296006 - Exonic hg19 ACC TCGA-OR-A5J1-01A 6 21 Out-of-frame Intra-chr q29 q29 Seq+ 16291 ChimerSeq STARFusion TCGA_RNA-Seq TBCA-ARSB TBCA chr5 77004067 - ARSB chr5 78135249 - Exonic hg19 ACC TCGA-OR-A5J1-01A 5 16 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 16292 ChimerSeq STARFusion TCGA_RNA-Seq DAB2-COL4A3BP DAB2 chr5 39424906 - COL4A3BP chr5 74755006 - Exonic hg19 ACC TCGA-OR-A5J1-01A 4 18 5'UTR-CDS Intra-chr p13.1 Tumor suppressor gene q13.3 Seq+ 16293 ChimerSeq STARFusion TCGA_RNA-Seq LSP1-SYT8 LSP1 chr11 1874427 + SYT8 chr11 1856327 + Exonic hg19 ACC TCGA-OR-A5J1-01A 4 16 Out-of-frame Intra-chr p15.5 p15.5 Seq+ 16294 ChimerSeq STARFusion TCGA_RNA-Seq TBCD-GLIPR2 TBCD chr17 80842078 + GLIPR2 chr9 36147783 + Exonic hg19 ACC TCGA-OR-A5J1-01A 3 15 Out-of-frame Inter-chr p13.3 Seq+ 16295 ChimerSeq STARFusion TCGA_RNA-Seq CWC27-PPAP2A CWC27 chr5 64181373 + PPAP2A chr5 54721867 - Exonic hg19 ACC TCGA-OR-A5J1-01A 5 5 Out-of-frame Intra-chr q12.3 Seq+ 16296 ChimerSeq STARFusion TCGA_RNA-Seq DYNC1I1-ASB4 DYNC1I1 chr7 95499310 + ASB4 chr7 95125070 + Exonic hg19 ACC TCGA-OR-A5J1-01A 4 9 In-Frame Intra-chr q21.3 q21.3 Seq+ 16297 ChimerSeq STARFusion TCGA_RNA-Seq UIMC1-DBN1 UIMC1 chr5 176370336 - DBN1 chr5 176895900 - Exonic hg19 ACC TCGA-OR-A5J1-01A 3 13 Out-of-frame Intra-chr q35.2 Tumor suppressor gene q35.3 Seq+ 16298 ChimerSeq STARFusion TCGA_RNA-Seq TBCD-GLIPR2 TBCD chr17 80842078 + GLIPR2 chr9 36162359 + Exonic hg19 ACC TCGA-OR-A5J1-01A 2 15 Out-of-frame Inter-chr p13.3 Seq+ 16299 ChimerSeq STARFusion TCGA_RNA-Seq MIER3-KIF2A MIER3 chr5 56231255 - KIF2A chr5 61681311 + Exonic hg19 ACC TCGA-OR-A5J1-01A 3 9 In-Frame Intra-chr q11.2 q12.1 Seq+ 16300 ChimerSeq STARFusion TCGA_RNA-Seq TNPO1-MEF2C TNPO1 chr5 72112579 + MEF2C chr5 88057145 - Exonic hg19 ACC TCGA-OR-A5J1-01A 2 3 In-Frame Intra-chr q13.2 q14.3 Transcription factor Seq+ 16301 ChimerSeq STARFusion TCGA_RNA-Seq BIRC6-TTC27 BIRC6 chr2 32582554 + TTC27 chr2 33042524 + Exonic hg19 ACC TCGA-OR-A5JC-01A 10 36 In-Frame Intra-chr p22.3 p22.3 Seq+ 16302 ChimerSeq STARFusion TCGA_RNA-Seq FAM19A4-LMOD3 FAM19A4 chr3 68929881 - LMOD3 chr3 69171560 - Exonic hg19 ACC TCGA-OR-A5JC-01A 3 9 CDS-5'UTR Intra-chr p14.1 p14.1 Seq+ 16303 ChimerSeq STARFusion TCGA_RNA-Seq CLPTM1L-GPHN CLPTM1L chr5 1341786 - GPHN chr14 67243182 + Exonic hg19 ACC TCGA-OR-A5JC-01A 4 1 Out-of-frame Inter-chr p15.33 q23.3 16304 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R5E-XRCC3 PPP2R5E chr14 63881858 - XRCC3 chr14 104177904 - Exonic hg19 ACC TCGA-OR-A5JC-01A 3 1 CDS-5'UTR Intra-chr q23.2 q32.33 Seq+ 16305 ChimerSeq STARFusion TCGA_RNA-Seq PACSIN2-TTLL1 PACSIN2 chr22 43411027 - TTLL1 chr22 43435911 - Exonic hg19 ACC TCGA-OR-A5JC-01A 2 4 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 16306 ChimerSeq STARFusion TCGA_RNA-Seq SMOC1-EIF2B2 SMOC1 chr14 70420249 + EIF2B2 chr14 75469978 + Exonic hg19 ACC TCGA-OR-A5JC-01A 2 1 Out-of-frame Intra-chr q24.2 q24.3 16307 ChimerSeq STARFusion TCGA_RNA-Seq NOSIP-NAP1L1 NOSIP chr19 50080016 - NAP1L1 chr12 76444433 - Exonic hg19 ACC TCGA-OR-A5LJ-01A 2 0 5'UTR-CDS Inter-chr q13.33 q21.2 16308 ChimerSeq STARFusion TCGA_RNA-Seq CYB5B-COTL1 CYB5B chr16 69458760 + COTL1 chr16 84600561 - Exonic hg19 ACC TCGA-OR-A5JF-01A 4 1 In-Frame Intra-chr q22.1 q24.1 Seq+ 16309 ChimerSeq STARFusion TCGA_RNA-Seq PPP1CB-BRE PPP1CB chr2 28975042 + BRE chr2 28521205 + Exonic hg19 ACC TCGA-OR-A5KY-01A 318 1409 In-Frame Intra-chr p23.2 Seq+ 16310 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 124882665 - SCARB1 chr12 125263132 - Exonic hg19 ACC TCGA-OR-A5KY-01A 58 363 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 16311 ChimerSeq STARFusion TCGA_RNA-Seq CHD3-RAD51C CHD3 chr17 7797253 + RAD51C chr17 56787220 + Exonic hg19 ACC TCGA-OR-A5KY-01A 17 88 In-Frame Intra-chr p13.1 q22 Tumor suppressor gene Seq+ 16312 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R37-BCAM PPP1R37 chr19 45596785 + BCAM chr19 45314482 + Exonic hg19 ACC TCGA-OR-A5KY-01A 14 54 In-Frame Intra-chr q13.32 q13.32 Seq+ 16313 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT5-ASIP B4GALT5 chr20 48330113 - ASIP chr20 32848171 + Exonic hg19 ACC TCGA-OR-A5KY-01A 12 32 CDS-5'UTR Intra-chr q13.13 q11.22 Seq+ 16314 ChimerSeq STARFusion TCGA_RNA-Seq ASB3-MTA3 ASB3 chr2 54013958 - MTA3 chr2 42867313 + Exonic hg19 ACC TCGA-OR-A5KY-01A 4 15 5'UTR-CDS Intra-chr p16.2 p21 Seq+ 16315 ChimerSeq STARFusion TCGA_RNA-Seq FHOD3-ESRRB FHOD3 chr18 33952707 + ESRRB chr14 76948359 + Exonic hg19 ACC TCGA-OR-A5KY-01A 2 22 In-Frame Inter-chr q12.2 q24.3 Tumor suppressor gene Transcription factor Seq+ 16316 ChimerSeq STARFusion TCGA_RNA-Seq ALDH3A2-EIF5A ALDH3A2 chr17 19575269 + EIF5A chr17 7212934 + Exonic hg19 ACC TCGA-OR-A5KY-01A 2 21 In-Frame Intra-chr p11.2 p13.1 Seq+ 16317 ChimerSeq STARFusion TCGA_RNA-Seq TMEM248-ATOH8 TMEM248 chr7 66407011 + ATOH8 chr2 85991114 + Exonic hg19 ACC TCGA-OR-A5KY-01A 2 12 Out-of-frame Inter-chr q11.21 p11.2 Transcription factor Seq+ 16318 ChimerSeq STARFusion TCGA_RNA-Seq AHSA2-C2orf74 AHSA2 chr2 61413632 + C2orf74 chr2 61389977 + Exonic hg19 ACC TCGA-OR-A5KY-01A 3 7 Out-of-frame Intra-chr p15 p15 Seq+ 16319 ChimerSeq STARFusion TCGA_RNA-Seq BRMS1L-ZNF839 BRMS1L chr14 36304129 + ZNF839 chr14 102805153 + Exonic hg19 ACC TCGA-OR-A5KW-01A 2 17 In-Frame Intra-chr q13.2 q32.31 Seq+ 16320 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2NL-FCGR3B NOTCH2NL chr1 145209436 + FCGR3B chr1 161600178 - Exonic hg19 ACC TCGA-OR-A5LL-01A 21 62 5'UTR-CDS Intra-chr q21.1 q23.3 Seq+ 16321 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2NL-FCGR3B NOTCH2NL chr1 145209436 + FCGR3B chr1 161599825 - Exonic hg19 ACC TCGA-OR-A5LL-01A 3 62 5'UTR-CDS Intra-chr q21.1 q23.3 Seq+ 16322 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2NL-FCGR3A NOTCH2NL chr1 145209436 + FCGR3A chr1 161518821 - Exonic hg19 ACC TCGA-OR-A5LL-01A 5 21 5'UTR-CDS Intra-chr q21.1 q23.3 16323 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2NL-FCGR3A NOTCH2NL chr1 145209436 + FCGR3A chr1 161518468 - Exonic hg19 ACC TCGA-OR-A5LL-01A 2 21 5'UTR-CDS Intra-chr q21.1 q23.3 16324 ChimerSeq STARFusion TCGA_RNA-Seq FTSJD2-SMIM13 FTSJD2 chr6 37441377 + SMIM13 chr6 11134636 + Exonic hg19 ACC TCGA-OR-A5LM-01A 3 24 Out-of-frame Intra-chr p24.2 16325 ChimerSeq STARFusion TCGA_RNA-Seq AARS2-SPATS1 AARS2 chr6 44278731 - SPATS1 chr6 44328183 + Exonic hg19 ACC TCGA-OR-A5J8-01A 184 1079 In-Frame Intra-chr p21.1 p21.1 Seq+ 16326 ChimerSeq STARFusion TCGA_RNA-Seq AARS2-SPATS1 AARS2 chr6 44278036 - SPATS1 chr6 44328183 + Exonic hg19 ACC TCGA-OR-A5J8-01A 20 1079 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 16327 ChimerSeq STARFusion TCGA_RNA-Seq EIF4H-AARS2 EIF4H chr7 73588772 + AARS2 chr6 44280000 - Exonic hg19 ACC TCGA-OR-A5J8-01A 118 437 Out-of-frame Inter-chr q11.23 p21.1 Seq+ 16328 ChimerSeq STARFusion TCGA_RNA-Seq CAPRIN1-CD151 CAPRIN1 chr11 34112225 + CD151 chr11 838133 + Exonic hg19 ACC TCGA-OR-A5J8-01A 8 65 In-Frame Intra-chr p13 p15.5 Seq+ 16329 ChimerSeq STARFusion TCGA_RNA-Seq ZNF670-LINC00240 ZNF670 chr1 247241896 - LINC00240 chr6 26991033 + Exonic hg19 ACC TCGA-OR-A5J8-01A 2 8 CDS-5'UTR Inter-chr q44 Transcription factor p22.2 16330 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPA1-LOC100240734 HNRNPA1 chr12 54677018 + LOC100240734 chr12 54495998 + Exonic hg19 ACC TCGA-OR-A5JA-01A 974 1781 CDS-5'UTR Intra-chr q13.13 16331 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPA1P10-LOC100240734 HNRNPA1P10 chr12 54677018 + LOC100240734 chr12 54495998 + Exonic hg19 ACC TCGA-OR-A5JA-01A 72 374 Out-of-frame Intra-chr p13.2 16332 ChimerSeq STARFusion TCGA_RNA-Seq CABIN1-MIF CABIN1 chr22 24451622 + MIF chr22 24236959 + Exonic hg19 ACC TCGA-OR-A5JA-01A 9 28 Out-of-frame Intra-chr q11.23 Tumor suppressor gene Seq+ 16333 ChimerSeq STARFusion TCGA_RNA-Seq CABIN1-MIF CABIN1 chr22 24447436 + MIF chr22 24236959 + Exonic hg19 ACC TCGA-OR-A5JA-01A 3 28 Out-of-frame Intra-chr q11.23 Tumor suppressor gene Seq+ 16334 ChimerSeq STARFusion TCGA_RNA-Seq PAH-METAP2 PAH chr12 103288513 - METAP2 chr12 95906577 + Exonic hg19 ACC TCGA-OR-A5JA-01A 4 10 Out-of-frame Intra-chr q23.2 q22 Seq+ 16335 ChimerSeq STARFusion TCGA_RNA-Seq VCP-FAM214B VCP chr9 35072334 - FAM214B chr9 35108734 - Exonic hg19 ACC TCGA-OR-A5JA-01A 5 6 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 16336 ChimerSeq STARFusion TCGA_RNA-Seq NTN4-PAH NTN4 chr12 96076483 - PAH chr12 103288696 - Exonic hg19 ACC TCGA-OR-A5JA-01A 2 16 Out-of-frame Intra-chr q22 q23.2 Seq+ 16337 ChimerSeq STARFusion TCGA_RNA-Seq DLK1-C1QB DLK1 chr14 101198516 + C1QB chr1 22987904 + Exonic hg19 ACC TCGA-OR-A5JR-01A 10 2 Out-of-frame Inter-chr q32.2 Tumor suppressor gene p36.12 16338 ChimerSeq STARFusion TCGA_RNA-Seq STK4-PI3 STK4 chr20 43653771 + PI3 chr20 43804502 + Exonic hg19 ACC TCGA-OR-A5JR-01A 2 0 Out-of-frame Intra-chr q13.12 q13.12 16339 ChimerSeq STARFusion TCGA_RNA-Seq GTF2A1-POMT2 GTF2A1 chr14 81686833 - POMT2 chr14 77769286 - Exonic hg19 ACC TCGA-OR-A5JL-01A 12 37 Out-of-frame Intra-chr q31.1 q24.3 Seq+ 16340 ChimerSeq STARFusion TCGA_RNA-Seq GTF2A1-POMT2 GTF2A1 chr14 81686833 - POMT2 chr14 77767592 - Exonic hg19 ACC TCGA-OR-A5JL-01A 4 37 Out-of-frame Intra-chr q31.1 q24.3 Seq+ 16341 ChimerSeq STARFusion TCGA_RNA-Seq ANO2-KCNA6 ANO2 chr12 5841683 - KCNA6 chr12 4959906 + Exonic hg19 ACC TCGA-OR-A5JL-01A 7 12 Out-of-frame Intra-chr p13.31 16342 ChimerSeq STARFusion TCGA_RNA-Seq KDM6A-FUNDC1 KDM6A chrX 44833960 + FUNDC1 chrX 44401347 - Exonic hg19 ACC TCGA-OR-A5KV-01A 47 402 Out-of-frame Intra-chr p11.3 Oncogene Tumor suppressor gene p11.3 Seq+ 16343 ChimerSeq STARFusion TCGA_RNA-Seq KDM6A-FUNDC1 KDM6A chrX 44833960 + FUNDC1 chrX 44386611 - Exonic hg19 ACC TCGA-OR-A5KV-01A 23 402 In-Frame Intra-chr p11.3 Oncogene Tumor suppressor gene p11.3 Seq+ 16344 ChimerSeq STARFusion TCGA_RNA-Seq KDM6A-FUNDC1 KDM6A chrX 44833960 + FUNDC1 chrX 44397788 - Exonic hg19 ACC TCGA-OR-A5KV-01A 10 402 Out-of-frame Intra-chr p11.3 Oncogene Tumor suppressor gene p11.3 Seq+ 16345 ChimerSeq STARFusion TCGA_RNA-Seq PHF16-SSX2B PHF16 chrX 46917747 + SSX2B chrX 52729628 - Exonic hg19 ACC TCGA-OR-A5KV-01A 45 213 CDS-5'UTR Intra-chr p11.22 16346 ChimerSeq STARFusion TCGA_RNA-Seq PHF16-SSX2 PHF16 chrX 46917747 + SSX2 chrX 52786931 + Exonic hg19 ACC TCGA-OR-A5KV-01A 6 51 Out-of-frame Intra-chr p11.22 16347 ChimerSeq STARFusion TCGA_RNA-Seq REPS2-APOO REPS2 chrX 16965257 + APOO chrX 23899069 - Exonic hg19 ACC TCGA-OR-A5KV-01A 3 6 In-Frame Intra-chr p22.2 p22.11 Seq+ 16348 ChimerSeq STARFusion TCGA_RNA-Seq KDM6A-DMD KDM6A chrX 44733233 + DMD chrX 31676261 - Exonic hg19 ACC TCGA-OR-A5KV-01A 2 4 In-Frame Intra-chr p11.3 Oncogene Tumor suppressor gene p21.1 Tumor suppressor gene Seq+ 16349 ChimerSeq STARFusion TCGA_RNA-Seq OAZ1-AMH OAZ1 chr19 2269589 + AMH chr19 2250190 + Exonic hg19 ACC TCGA-OR-A5K5-01A 48 100 Out-of-frame Intra-chr p13.3 p13.3 Tumor suppressor gene Seq+ 16350 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-QTRT1 DNM2 chr19 10829079 + QTRT1 chr19 10817978 + Exonic hg19 ACC TCGA-OR-A5K5-01A 23 96 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 16351 ChimerSeq STARFusion TCGA_RNA-Seq MED16-R3HDM4 MED16 chr19 871926 - R3HDM4 chr19 897540 - Exonic hg19 ACC TCGA-OR-A5K5-01A 22 74 In-Frame Intra-chr p13.3 p13.3 16352 ChimerSeq STARFusion TCGA_RNA-Seq SIK3-CTNNBIP1 SIK3 chr11 116968859 - CTNNBIP1 chr1 9910834 - Exonic hg19 ACC TCGA-OR-A5K5-01A 15 83 Out-of-frame Inter-chr q23.3 p36.22 Tumor suppressor gene Seq+ 16353 ChimerSeq STARFusion TCGA_RNA-Seq CARM1-C19orf38 CARM1 chr19 10982598 + C19orf38 chr19 10979894 + Exonic hg19 ACC TCGA-OR-A5K5-01A 23 39 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 16354 ChimerSeq STARFusion TCGA_RNA-Seq BRK1-FANCD2 BRK1 chr3 10157503 + FANCD2 chr3 10138010 + Exonic hg19 ACC TCGA-OR-A5K5-01A 9 70 Out-of-frame Intra-chr p25.3 p25.3 Oncogene Seq+ 16355 ChimerSeq STARFusion TCGA_RNA-Seq BRK1-FANCD2 BRK1 chr3 10157503 + FANCD2 chr3 10136884 + Exonic hg19 ACC TCGA-OR-A5K5-01A 6 70 Out-of-frame Intra-chr p25.3 p25.3 Oncogene Seq+ 16356 ChimerSeq STARFusion TCGA_RNA-Seq TXNDC11-CIB4 TXNDC11 chr16 11829873 - CIB4 chr2 26863435 - Exonic hg19 ACC TCGA-OR-A5K5-01A 9 43 In-Frame Inter-chr p13.13 p23.3 Seq+ 16357 ChimerSeq STARFusion TCGA_RNA-Seq BRK1-FANCD2 BRK1 chr3 10157503 + FANCD2 chr3 10134969 + Exonic hg19 ACC TCGA-OR-A5K5-01A 2 70 Out-of-frame Intra-chr p25.3 p25.3 Oncogene Seq+ 16358 ChimerSeq STARFusion TCGA_RNA-Seq RAB8A-PLVAP RAB8A chr19 16222835 + PLVAP chr19 17477004 - Exonic hg19 ACC TCGA-OR-A5K5-01A 7 42 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 16359 ChimerSeq STARFusion TCGA_RNA-Seq LOC728558-PAOX LOC728558 chr10 97849023 - PAOX chr10 135202460 + Exonic hg19 ACC TCGA-OR-A5K5-01A 12 16 3'UTR-CDS Intra-chr q26.3 16360 ChimerSeq STARFusion TCGA_RNA-Seq TXNDC11-CIB4 TXNDC11 chr16 11836333 - CIB4 chr2 26863435 - Exonic hg19 ACC TCGA-OR-A5K5-01A 2 43 Out-of-frame Inter-chr p13.13 p23.3 Seq+ 16361 ChimerSeq STARFusion TCGA_RNA-Seq TMEM87B-MERTK TMEM87B chr2 112817614 + MERTK chr2 112785928 + Exonic hg19 ACC TCGA-OR-A5K5-01A 4 23 Out-of-frame Intra-chr q13 q13 Seq+ 16362 ChimerSeq STARFusion TCGA_RNA-Seq KCMF1-RAB1A KCMF1 chr2 85198590 + RAB1A chr2 65325200 - Exonic hg19 ACC TCGA-OR-A5K5-01A 3 13 Out-of-frame Intra-chr p11.2 Transcription factor p14 Seq+ 16363 ChimerSeq STARFusion TCGA_RNA-Seq BTRC-MICU1 BTRC chr10 103113985 + MICU1 chr10 74326552 - Exonic hg19 ACC TCGA-OR-A5K5-01A 2 7 CDS-5'UTR Intra-chr q24.32 q22.1 Seq+ 16364 ChimerSeq STARFusion TCGA_RNA-Seq MYO1F-LRSAM1 MYO1F chr19 8642191 - LRSAM1 chr9 130214208 + Exonic hg19 ACC TCGA-OR-A5K5-01A 2 5 CDS-5'UTR Inter-chr p13.2 q33.3 Seq+ 16365 ChimerSeq STARFusion TCGA_RNA-Seq MSH5-BSCL2 MSH5 chr6_ssto_hap7 3057767 + BSCL2 chr11 62460269 - Exonic hg19 ACC TCGA-OR-A5K5-01A 2 4 5'UTR-CDS Inter-chr q12.3 Seq+ 16366 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H8-PARD3B ZC3H8 chr2 112988480 - PARD3B chr2 206023446 + Exonic hg19 ACC TCGA-OR-A5K5-01A 2 2 3'UTR-CDS Intra-chr q14.1 Transcription factor q33.3 Seq+ 16367 ChimerSeq STARFusion TCGA_RNA-Seq SENP2-MSH5 SENP2 chr3 185316812 + MSH5 chr6_qbl_hap6 3020185 + Exonic hg19 ACC TCGA-OR-A5K5-01A 2 1 CDS-5'UTR Inter-chr q27.2 Seq+ 16368 ChimerSeq STARFusion TCGA_RNA-Seq C7-CYP17A1 C7 chr5 40982744 + CYP17A1 chr10 104590739 - Exonic hg19 ACC TCGA-OR-A5JW-01A 3 3 Out-of-frame Inter-chr p13.1 Tumor suppressor gene q24.32 16369 ChimerSeq STARFusion TCGA_RNA-Seq RASSF8-SSPN RASSF8 chr12 26208379 + SSPN chr12 26377226 + Exonic hg19 ACC TCGA-OR-A5LP-01A 2 1 Out-of-frame Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 16370 ChimerSeq STARFusion TCGA_RNA-Seq VPS41-CEP41 VPS41 chr7 38794302 - CEP41 chr7 130067859 - Exonic hg19 ACC TCGA-OR-A5KZ-01A 3 23 In-Frame Intra-chr p14.1 q32.2 Seq+ 16371 ChimerSeq STARFusion TCGA_RNA-Seq LOC100288778-WASH3P LOC100288778 chr12 89018 + WASH3P chr15 102515210 + Exonic hg19 ACC TCGA-OR-A5JJ-01A 4 12 5'UTR-5'UTR Inter-chr q26.3 16372 ChimerSeq STARFusion TCGA_RNA-Seq ZC4H2-ARHGEF9 ZC4H2 chrX 64254509 - ARHGEF9 chrX 62863928 - Exonic hg19 ACC TCGA-OR-A5JJ-01A 2 0 5'UTR-CDS Intra-chr q11.2 q11.2 16373 ChimerSeq STARFusion TCGA_RNA-Seq FHOD3-ELP2 FHOD3 chr18 33952707 + ELP2 chr18 33722789 + Exonic hg19 ACC TCGA-OU-A5PI-01A 5 60 In-Frame Intra-chr q12.2 q12.2 Seq+ 16374 ChimerSeq STARFusion TCGA_RNA-Seq FHOD3-ELP2 FHOD3 chr18 33952707 + ELP2 chr18 33724902 + Exonic hg19 ACC TCGA-OU-A5PI-01A 3 60 In-Frame Intra-chr q12.2 q12.2 Seq+ 16375 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPA2B1-HSD17B10 HNRNPA2B1 chr7 26240192 - HSD17B10 chrX 53460833 - Exonic hg19 ACC TCGA-OU-A5PI-01A 5 10 In-Frame Inter-chr p15.2 p11.22 Seq+ 16376 ChimerSeq STARFusion TCGA_RNA-Seq ST3GAL2-VAC14 ST3GAL2 chr16 70472852 - VAC14 chr16 70806075 - Exonic hg19 ACC TCGA-OU-A5PI-01A 5 6 5'UTR-CDS Intra-chr q22.1 q22.2 Seq+ 16377 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-SNTB2 NFAT5 chr16 69600277 + SNTB2 chr16 69279505 + Exonic hg19 ACC TCGA-OU-A5PI-01A 2 17 In-Frame Intra-chr q22.1 Transcription factor Seq+ 16378 ChimerSeq STARFusion TCGA_RNA-Seq PLCB1-WTIP PLCB1 chr20 8737825 + WTIP chr19 34981281 + Exonic hg19 ACC TCGA-OU-A5PI-01A 2 6 In-Frame Inter-chr p12.3 q13.11 Seq+ 16379 ChimerSeq STARFusion TCGA_RNA-Seq CC2D2A-BST1 CC2D2A chr4 15482451 + BST1 chr4 15713430 + Exonic hg19 ACC TCGA-OU-A5PI-01A 2 1 In-Frame Intra-chr p15.32 p15.32 Seq+ 16380 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-FAM166A MALAT1 chr11 65269547 + FAM166A chr9 140139674 - Exonic hg19 ACC TCGA-OR-A5JD-01A 15 67 Out-of-frame Inter-chr q13.1 q34.3 Seq+ 16381 ChimerSeq STARFusion TCGA_RNA-Seq C21orf90-LETMD1 C21orf90 chr21 45937718 + LETMD1 chr12 51442817 + Exonic hg19 ACC TCGA-OR-A5JD-01A 2 0 5'UTR-5'UTR Inter-chr q13.12 16382 ChimerSeq STARFusion TCGA_RNA-Seq WBSCR16-DENND1A WBSCR16 chr7 74466818 - DENND1A chr9 126165769 - Exonic hg19 ACC TCGA-PK-A5HA-01A 6 44 In-Frame Inter-chr q33.3 16383 ChimerSeq STARFusion TCGA_RNA-Seq EPG5-PSTPIP2 EPG5 chr18 43547143 - PSTPIP2 chr18 43579500 - Exonic hg19 ACC TCGA-PK-A5HA-01A 4 38 In-Frame Intra-chr q21.1 q21.1 16384 ChimerSeq STARFusion TCGA_RNA-Seq NLRC5-NUP93 NLRC5 chr16 57056227 + NUP93 chr16 56878411 + Exonic hg19 ACC TCGA-PK-A5HA-01A 2 20 Out-of-frame Intra-chr q13 q13 Seq+ 16385 ChimerSeq STARFusion TCGA_RNA-Seq MCCC1-LAMP3 MCCC1 chr3 182804481 - LAMP3 chr3 182872179 - Exonic hg19 ACC TCGA-PK-A5HA-01A 4 5 Out-of-frame Intra-chr q27.1 q27.1 Seq+ 16386 ChimerSeq STARFusion TCGA_RNA-Seq PPIP5K1-FRMD5 PPIP5K1 chr15 43827172 - FRMD5 chr15 44181070 - Exonic hg19 ACC TCGA-PK-A5HA-01A 3 7 Out-of-frame Intra-chr q15.3 q15.3 Seq+ 16387 ChimerSeq STARFusion TCGA_RNA-Seq NEK4-TMEM110 NEK4 chr3 52797486 - TMEM110 chr3 52889460 - Exonic hg19 ACC TCGA-PK-A5HA-01A 2 3 Out-of-frame Intra-chr p21.1 Other:NEK p21.1 Seq+ 16388 ChimerSeq STARFusion TCGA_RNA-Seq KRBOX1-FAM198A KRBOX1 chr3 42983563 + FAM198A chr3 43095013 + Exonic hg19 ACC TCGA-PK-A5HA-01A 2 2 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 16389 ChimerSeq STARFusion TCGA_RNA-Seq GABRA5-NOV GABRA5 chr15 27114481 + NOV chr8 120428626 + Exonic hg19 ACC TCGA-OR-A5JY-01A 34 244 CDS-5'UTR Inter-chr q12 q24.12 Tumor suppressor gene Seq+ 16390 ChimerSeq STARFusion TCGA_RNA-Seq CREB3L2-CPA2 CREB3L2 chr7 137686350 - CPA2 chr7 129921944 + Exonic hg19 ACC TCGA-OR-A5JY-01A 30 97 In-Frame Intra-chr q33 Transcription factor q32.2 Seq+ 16391 ChimerSeq STARFusion TCGA_RNA-Seq HPS4-CABIN1 HPS4 chr22 26875231 - CABIN1 chr22 24560368 + Exonic hg19 ACC TCGA-OR-A5JY-01A 13 46 In-Frame Intra-chr q12.1 Seq+ 16392 ChimerSeq STARFusion TCGA_RNA-Seq COMT-YPEL1 COMT chr22 19951822 + YPEL1 chr22 22065197 - Exonic hg19 ACC TCGA-OR-A5JY-01A 10 57 CDS-5'UTR Intra-chr q11.21 q11.22 Seq+ 16393 ChimerSeq STARFusion TCGA_RNA-Seq UBE2J1-C6orf165 UBE2J1 chr6 90062258 - C6orf165 chr6 88173738 + Exonic hg19 ACC TCGA-OR-A5JY-01A 4 29 Out-of-frame Intra-chr q15 Seq+ 16394 ChimerSeq STARFusion TCGA_RNA-Seq UBE2J1-C6orf165 UBE2J1 chr6 90062258 - C6orf165 chr6 88170740 + Exonic hg19 ACC TCGA-OR-A5JY-01A 2 29 Out-of-frame Intra-chr q15 Seq+ 16395 ChimerSeq STARFusion TCGA_RNA-Seq PAFAH1B2-RRP7B PAFAH1B2 chr11 117015134 + RRP7B chr22 42976365 - Exonic hg19 ACC TCGA-OR-A5JY-01A 3 21 5'UTR-3'UTR Inter-chr q23.3 16396 ChimerSeq STARFusion TCGA_RNA-Seq MGA-NUSAP1 MGA chr15 41991357 + NUSAP1 chr15 41641296 + Exonic hg19 ACC TCGA-OR-A5JY-01A 4 9 Out-of-frame Intra-chr q15.1 Transcription factor q15.1 Seq+ 16397 ChimerSeq STARFusion TCGA_RNA-Seq VPS26B-C15orf41 VPS26B chr11 134110049 + C15orf41 chr15 36936479 + Exonic hg19 ACC TCGA-OR-A5JY-01A 2 14 In-Frame Inter-chr q25 q14 Seq+ 16398 ChimerSeq STARFusion TCGA_RNA-Seq CHD4-VWF CHD4 chr12 6680035 - VWF chr12 6145657 - Exonic hg19 ACC TCGA-OR-A5JY-01A 4 5 In-Frame Intra-chr p13.31 p13.31 Seq+ 16399 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-ATG7 TBL1XR1 chr3 176914909 - ATG7 chr3 11596285 + Exonic hg19 ACC TCGA-OR-A5JY-01A 2 3 5'UTR-CDS Intra-chr q26.32 p25.3 Seq+ 16400 ChimerSeq STARFusion TCGA_RNA-Seq SIK3-SERHL2 SIK3 chr11 116968859 - SERHL2 chr22 42950944 + Exonic hg19 ACC TCGA-OR-A5JY-01A 2 1 Out-of-frame Inter-chr q23.3 q13.2 16401 ChimerSeq STARFusion TCGA_RNA-Seq PAPSS2-MINPP1 PAPSS2 chr10 89487246 + MINPP1 chr10 89311839 + Exonic hg19 ACC TCGA-PK-A5HB-01A 42 306 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 16402 ChimerSeq STARFusion TCGA_RNA-Seq PAPSS2-MINPP1 PAPSS2 chr10 89475600 + MINPP1 chr10 89311839 + Exonic hg19 ACC TCGA-PK-A5HB-01A 5 306 In-Frame Intra-chr q23.2 q23.2 Seq+ 16403 ChimerSeq STARFusion TCGA_RNA-Seq RRP7A-PACSIN2 RRP7A chr22 42914011 - PACSIN2 chr22 43275175 - Exonic hg19 ACC TCGA-PK-A5HB-01A 8 132 In-Frame Intra-chr q13.2 q13.2 Seq+ 16404 ChimerSeq STARFusion TCGA_RNA-Seq RRP7A-PACSIN2 RRP7A chr22 42915720 - PACSIN2 chr22 43275175 - Exonic hg19 ACC TCGA-PK-A5HB-01A 7 132 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 16405 ChimerSeq STARFusion TCGA_RNA-Seq GYS1-KDELR1 GYS1 chr19 49489107 - KDELR1 chr19 48892968 - Exonic hg19 ACC TCGA-PK-A5HB-01A 2 1 In-Frame Intra-chr q13.33 q13.33 16406 ChimerSeq STARFusion TCGA_RNA-Seq NUTF2-TSNAXIP1 NUTF2 chr16 67880888 + TSNAXIP1 chr16 67860866 + Exonic hg19 ACC TCGA-OR-A5K2-01A 20 46 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 16407 ChimerSeq STARFusion TCGA_RNA-Seq NFIC-C16orf55 NFIC chr19 3366664 + C16orf55 chr16 89735694 + Exonic hg19 ACC TCGA-OR-A5K2-01A 10 42 Out-of-frame Inter-chr p13.3 Transcription factor Seq+ 16408 ChimerSeq STARFusion TCGA_RNA-Seq NUTF2-TSNAXIP1 NUTF2 chr16 67880888 + TSNAXIP1 chr16 67861152 + Exonic hg19 ACC TCGA-OR-A5K2-01A 6 46 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 16409 ChimerSeq STARFusion TCGA_RNA-Seq PACSIN2-TTLL1 PACSIN2 chr22 43411027 - TTLL1 chr22 43455533 - Exonic hg19 ACC TCGA-OR-A5K2-01A 2 14 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 16410 ChimerSeq STARFusion TCGA_RNA-Seq TLCD2-LRP5 TLCD2 chr17 1612793 - LRP5 chr11 68177382 + Exonic hg19 ACC TCGA-OR-A5K2-01A 2 2 In-Frame Inter-chr q13.2 Seq+ 16411 ChimerSeq STARFusion TCGA_RNA-Seq NOSTRIN-NOX5 NOSTRIN chr2 169659183 + NOX5 chr15 69347674 + Exonic hg19 ACC TCGA-OR-A5K2-01A 2 1 Out-of-frame Inter-chr q23 16412 ChimerSeq STARFusion TCGA_RNA-Seq CCDC117-TNNI2 CCDC117 chr22 29169013 + TNNI2 chr11 1862502 + Exonic hg19 ACC TCGA-OR-A5LE-01A 31 76 Out-of-frame Inter-chr q12.1 p15.5 Seq+ 16413 ChimerSeq STARFusion TCGA_RNA-Seq SLCO1B1-IAPP SLCO1B1 chr12 21377773 + IAPP chr12 21526271 + Exonic hg19 ACC TCGA-OR-A5LE-01A 2 1 CDS-5'UTR Intra-chr p12.1 p12.1 Seq+ 16414 ChimerSeq STARFusion TCGA_RNA-Seq MT1E-MT2A MT1E chr16 56660439 + MT2A chr16 56642918 + Exonic hg19 ACC TCGA-OR-A5JG-01A 4 34 Out-of-frame Intra-chr q13 q13 Tumor suppressor gene 16415 ChimerSeq STARFusion TCGA_RNA-Seq ZEB2-ARHGAP15 ZEB2 chr2 145274845 - ARHGAP15 chr2 144460988 + Exonic hg19 ACC TCGA-OR-A5JG-01A 2 0 In-Frame Intra-chr q22.3 Transcription factor q22.2 16416 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF3-EMID1 ZNRF3 chr22 29383189 + EMID1 chr22 29650192 + Exonic hg19 ACC TCGA-OR-A5LH-01A 5 37 In-Frame Intra-chr q12.1 q12.2 Seq+ 16417 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF3-EMID1 ZNRF3 chr22 29383189 + EMID1 chr22 29639434 + Exonic hg19 ACC TCGA-OR-A5LH-01A 4 37 In-Frame Intra-chr q12.1 q12.2 Seq+ 16418 ChimerSeq STARFusion TCGA_RNA-Seq DCLK2-LRBA DCLK2 chr4 151023964 + LRBA chr4 151247050 - Exonic hg19 ACC TCGA-OR-A5LH-01A 2 12 In-Frame Intra-chr q31.23 CAMK:DCAMKL q31.3 Seq+ 16419 ChimerSeq STARFusion TCGA_RNA-Seq DLK1-C1QB DLK1 chr14 101198516 + C1QB chr1 22987904 + Exonic hg19 ACC TCGA-OR-A5JX-01A 5 1 Out-of-frame Inter-chr q32.2 Tumor suppressor gene p36.12 16420 ChimerSeq STARFusion TCGA_RNA-Seq NSD1-EFNA5 NSD1 chr5 176619020 + EFNA5 chr5 106717077 - Exonic hg19 ACC TCGA-OR-A5JS-01A 26 92 In-Frame Intra-chr q35.3 Oncogene q21.3 Tumor suppressor gene Seq+ 16421 ChimerSeq STARFusion TCGA_RNA-Seq GJC1-SKAP1 GJC1 chr17 42884762 - SKAP1 chr17 46266862 - Exonic hg19 ACC TCGA-OR-A5JS-01A 23 69 5'UTR-CDS Intra-chr q21.31 q21.32 Seq+ 16422 ChimerSeq STARFusion TCGA_RNA-Seq TLK2-CEP112 TLK2 chr17 60685509 + CEP112 chr17 63685336 - Exonic hg19 ACC TCGA-OR-A5JS-01A 19 67 In-Frame Intra-chr q23.2 Other:TLK q24.1 Seq+ 16423 ChimerSeq STARFusion TCGA_RNA-Seq GJC1-SKAP1 GJC1 chr17 42884762 - SKAP1 chr17 46277334 - Exonic hg19 ACC TCGA-OR-A5JS-01A 3 69 5'UTR-CDS Intra-chr q21.31 q21.32 Seq+ 16424 ChimerSeq STARFusion TCGA_RNA-Seq CCDC47-TERT CCDC47 chr17 61850772 - TERT chr5 1282739 - Exonic hg19 ACC TCGA-OR-A5JS-01A 2 8 5'UTR-CDS Inter-chr q23.3 p15.33 Oncogene Seq+ 16425 ChimerSeq STARFusion TCGA_RNA-Seq UIMC1-PJA2 UIMC1 chr5 176409470 - PJA2 chr5 108719221 - Exonic hg19 ACC TCGA-OR-A5JS-01A 3 4 CDS-5'UTR Intra-chr q35.2 Tumor suppressor gene q21.3 Seq+ 16426 ChimerSeq STARFusion TCGA_RNA-Seq RNF41-CS RNF41 chr12 56607742 - CS chr12 56669979 - Exonic hg19 ACC TCGA-OR-A5KU-01A 2 70 In-Frame Intra-chr q13.3 q13.3 Seq+ 16427 ChimerSeq STARFusion TCGA_RNA-Seq LDLR-ZGLP1 LDLR chr19 11200291 + ZGLP1 chr19 10419067 - Exonic hg19 ACC TCGA-OR-A5JP-01A 421 7674 Out-of-frame Intra-chr p13.2 p13.2 Transcription factor Seq+ 16428 ChimerSeq STARFusion TCGA_RNA-Seq LDLR-ZGLP1 LDLR chr19 11200291 + ZGLP1 chr19 10416628 - Exonic hg19 ACC TCGA-OR-A5JP-01A 263 7674 Out-of-frame Intra-chr p13.2 p13.2 Transcription factor Seq+ 16429 ChimerSeq STARFusion TCGA_RNA-Seq PEG3-DENR PEG3 chr19 57347438 - DENR chr12 123252135 + Exonic hg19 ACC TCGA-OR-A5JP-01A 35 260 Out-of-frame Inter-chr q13.43 Tumor suppressor gene Transcription factor q24.31 Seq+ 16430 ChimerSeq STARFusion TCGA_RNA-Seq ZIM2-DENR ZIM2 chr19 57347438 - DENR chr12 123252135 + Exonic hg19 ACC TCGA-OR-A5JP-01A 35 260 Out-of-frame Inter-chr q13.43 Transcription factor q24.31 Seq+ 16431 ChimerSeq STARFusion TCGA_RNA-Seq SCAMP4-COX8A SCAMP4 chr19 1918989 + COX8A chr11 63743697 + Exonic hg19 ACC TCGA-OR-A5JP-01A 10 287 Out-of-frame Inter-chr p13.3 q13.1 Seq+ 16432 ChimerSeq STARFusion TCGA_RNA-Seq SCAMP4-COX8A SCAMP4 chr19 1918282 + COX8A chr11 63743697 + Exonic hg19 ACC TCGA-OR-A5JP-01A 5 287 Out-of-frame Inter-chr p13.3 q13.1 Seq+ 16433 ChimerSeq STARFusion TCGA_RNA-Seq ARMC9-BLVRB ARMC9 chr2 232063412 + BLVRB chr19 40957399 - Exonic hg19 ACC TCGA-OR-A5JP-01A 40 83 5'UTR-CDS Inter-chr q37.1 q13.2 Seq+ 16434 ChimerSeq STARFusion TCGA_RNA-Seq LAPTM4B-ARMC9 LAPTM4B chr8 98788336 + ARMC9 chr2 232220510 + Exonic hg19 ACC TCGA-OR-A5JP-01A 7 14 CDS-3'UTR Inter-chr q22.1 q37.1 Seq+ 16435 ChimerSeq STARFusion TCGA_RNA-Seq QSOX2-CTU2 QSOX2 chr9 139137322 - CTU2 chr16 88781268 + Exonic hg19 ACC TCGA-OR-A5JP-01A 4 25 Out-of-frame Inter-chr q34.3 q24.3 Seq+ 16436 ChimerSeq STARFusion TCGA_RNA-Seq MYLIP-OR5V1 MYLIP chr6 16130978 + OR5V1 chr6_mcf_hap5 627688 - Exonic hg19 ACC TCGA-OR-A5JP-01A 4 13 CDS-3'UTR Inter-chr p22.3 Seq+ 16437 ChimerSeq STARFusion TCGA_RNA-Seq SYN2-PPARG SYN2 chr3 12224872 + PPARG chr3 12353879 + Exonic hg19 ACC TCGA-OR-A5JP-01A 2 4 CDS-5'UTR Intra-chr p25.2 p25.2 Oncogene Tumor suppressor gene Transcription factor 16438 ChimerSeq STARFusion TCGA_RNA-Seq RTEL1-KCNH3 RTEL1 chr20 62294242 + KCNH3 chr12 49934682 + Exonic hg19 ACC TCGA-OR-A5JP-01A 2 2 In-Frame Inter-chr q13.33 q13.12 16439 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R5C-PRKD1 PPP2R5C chr14 102276373 + PRKD1 chr14 30069023 - Exonic hg19 ACC TCGA-OR-A5J9-01A 2 31 Out-of-frame Intra-chr q32.31 Tumor suppressor gene q12 Seq+ 16440 ChimerSeq STARFusion TCGA_RNA-Seq ITPKA-NUSAP1 ITPKA chr15 41786614 + NUSAP1 chr15 41634584 + Exonic hg19 ACC TCGA-OR-A5J9-01A 2 13 In-Frame Intra-chr q15.1 q15.1 Seq+ 16441 ChimerSeq STARFusion TCGA_RNA-Seq NCS1-GPR107 NCS1 chr9 132935006 + GPR107 chr9 132889762 + Exonic hg19 ACC TCGA-OR-A5J9-01A 3 9 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 16442 ChimerSeq STARFusion TCGA_RNA-Seq RAD51B-BAZ1A RAD51B chr14 68353921 + BAZ1A chr14 35228052 - Exonic hg19 ACC TCGA-OR-A5J9-01A 2 3 Out-of-frame Intra-chr q24.1 q13.2 Seq+ 16443 ChimerSeq STARFusion TCGA_RNA-Seq CDH3-CHKA CDH3 chr16 68718727 + CHKA chr11 67836404 - Exonic hg19 BLCA TCGA-DK-A6AV-01A 68 400 In-Frame Inter-chr q22.1 q13.2 Seq+ 16444 ChimerSeq STARFusion TCGA_RNA-Seq FAM135A-SMAP1 FAM135A chr6 71248104 + SMAP1 chr6 71562243 + Exonic hg19 BLCA TCGA-DK-A6AV-01A 5 22 In-Frame Intra-chr q13 q13 16445 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB2-ST3GAL2 RPS6KB2 chr11 67197066 + ST3GAL2 chr16 70422449 - Exonic hg19 BLCA TCGA-DK-A6AV-01A 2 27 Out-of-frame Inter-chr q13.2 q22.1 Seq+ 16446 ChimerSeq STARFusion TCGA_RNA-Seq LINC00673-SDK2 LINC00673 chr17 70588342 - SDK2 chr17 71335079 - Exonic hg19 BLCA TCGA-DK-A6AV-01A 4 9 Out-of-frame Intra-chr q25.1 16447 ChimerSeq STARFusion TCGA_RNA-Seq TANGO6-FGF3 TANGO6 chr16 68964198 + FGF3 chr11 69631191 - Exonic hg19 BLCA TCGA-DK-A6AV-01A 2 7 Out-of-frame Inter-chr q22.1 q13.3 Seq+ 16448 ChimerSeq STARFusion TCGA_RNA-Seq HGSNAT-FUT10 HGSNAT chr8 43037403 + FUT10 chr8 33230322 - Exonic hg19 BLCA TCGA-UY-A8OC-01A 27 118 In-Frame Intra-chr p11.21 p12 Seq+ 16449 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57737949 + VMP1 chr17 57915656 + Exonic hg19 BLCA TCGA-UY-A8OC-01A 3 6 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 16450 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57759200 + VMP1 chr17 57915656 + Exonic hg19 BLCA TCGA-UY-A8OC-01A 2 6 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 16451 ChimerSeq STARFusion TCGA_RNA-Seq CNNM2-LOC100505839 CNNM2 chr10 104828479 + LOC100505839 chr10 105509540 + Exonic hg19 BLCA TCGA-DK-A1AE-01A 4 28 CDS-5'UTR Intra-chr q24.32 16452 ChimerSeq STARFusion TCGA_RNA-Seq LIPA-TMEM132A LIPA chr10 91005433 - TMEM132A chr11 60694676 + Exonic hg19 BLCA TCGA-FD-A62N-01A 2 22 In-Frame Inter-chr q23.31 q12.2 Seq+ 16453 ChimerSeq STARFusion TCGA_RNA-Seq EXOC2-OOEP EXOC2 chr6 693019 - OOEP chr6 74079108 - Exonic hg19 BLCA TCGA-SY-A9G5-01A 6 55 5'UTR-CDS Intra-chr p25.3 q13 Seq+ 16454 ChimerSeq STARFusion TCGA_RNA-Seq TAF8-HFE TAF8 chr6 42034197 + HFE chr6 26091069 + Exonic hg19 BLCA TCGA-SY-A9G5-01A 5 13 In-Frame Intra-chr p21.1 p22.2 Seq+ 16455 ChimerSeq STARFusion TCGA_RNA-Seq FZD6-DCAF13 FZD6 chr8 104312512 + DCAF13 chr8 104447854 + Exonic hg19 BLCA TCGA-SY-A9G5-01A 4 11 Out-of-frame Intra-chr q22.3 q22.3 16456 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D8-RNF149 TBC1D8 chr2 101638143 - RNF149 chr2 101898519 - Exonic hg19 BLCA TCGA-SY-A9G5-01A 2 5 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 16457 ChimerSeq STARFusion TCGA_RNA-Seq PCBP2-ITGB7 PCBP2 chr12 53865591 + ITGB7 chr12 53585420 - Exonic hg19 BLCA TCGA-E7-A7PW-01A 119 221 Out-of-frame Intra-chr q13.13 q13.13 Seq+ 16458 ChimerSeq STARFusion TCGA_RNA-Seq CDKAL1-IL22 CDKAL1 chr6 20781496 + IL22 chr12 68642656 - Exonic hg19 BLCA TCGA-E7-A7PW-01A 8 28 Out-of-frame Inter-chr p22.3 q15 16459 ChimerSeq STARFusion TCGA_RNA-Seq USP4-RHOA USP4 chr3 49377357 - RHOA chr3 49405981 - Exonic hg19 BLCA TCGA-E7-A7PW-01A 7 14 Out-of-frame Intra-chr p21.31 p21.31 Oncogene Tumor suppressor gene Seq+ 16460 ChimerSeq STARFusion TCGA_RNA-Seq E2F3-CDKAL1 E2F3 chr6 20404063 + CDKAL1 chr6 20846306 + Exonic hg19 BLCA TCGA-E7-A7PW-01A 2 21 Out-of-frame Intra-chr p22.3 Tumor suppressor gene Transcription factor p22.3 16461 ChimerSeq STARFusion TCGA_RNA-Seq NIT1-PFDN2 NIT1 chr1 161090022 + PFDN2 chr1 161072165 - Exonic hg19 BLCA TCGA-E7-A7PW-01A 3 14 In-Frame Intra-chr q23.3 q23.3 16462 ChimerSeq STARFusion TCGA_RNA-Seq RFC5-CPM RFC5 chr12 118462815 + CPM chr12 69252851 - Exonic hg19 BLCA TCGA-E7-A7PW-01A 2 0 Out-of-frame Intra-chr q24.23 q15 16463 ChimerSeq STARFusion TCGA_RNA-Seq PFKFB3-GDI2 PFKFB3 chr10 6245299 + GDI2 chr10 5842668 - Exonic hg19 BLCA TCGA-FD-A5BS-01A 4 37 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 16464 ChimerSeq STARFusion TCGA_RNA-Seq HIRA-ELK2AP HIRA chr22 19344505 - ELK2AP chr14 106136183 - Exonic hg19 BLCA TCGA-FD-A5BS-01A 8 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 16465 ChimerSeq STARFusion TCGA_RNA-Seq DYNC2H1-C11orf70 DYNC2H1 chr11 102999734 + C11orf70 chr11 101918546 + Exonic hg19 BLCA TCGA-C4-A0F0-01A 7 82 Out-of-frame Intra-chr q22.3 q22.1 Seq+ 16466 ChimerSeq STARFusion TCGA_RNA-Seq DYNC2H1-C11orf70 DYNC2H1 chr11 102999734 + C11orf70 chr11 101929611 + Exonic hg19 BLCA TCGA-C4-A0F0-01A 2 82 In-Frame Intra-chr q22.3 q22.1 Seq+ 16467 ChimerSeq STARFusion TCGA_RNA-Seq DYNC2H1-C11orf70 DYNC2H1 chr11 102996024 + C11orf70 chr11 101929611 + Exonic hg19 BLCA TCGA-C4-A0F0-01A 2 82 In-Frame Intra-chr q22.3 q22.1 Seq+ 16468 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-SEC13 RNA45S5 chrUn_gl000220 110662 + SEC13 chr3 10347367 - Exonic hg19 BLCA TCGA-C4-A0F0-01A 3 1 Out-of-frame Inter-chr p25.3 16469 ChimerSeq STARFusion TCGA_RNA-Seq RB1-WDFY2 RB1 chr13 48881542 + WDFY2 chr13 52325446 + Exonic hg19 BLCA TCGA-HQ-A5NE-01A 3 12 Out-of-frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.3 Seq+ 16470 ChimerSeq STARFusion TCGA_RNA-Seq RBM39-C20orf203 RBM39 chr20 34328746 - C20orf203 chr20 31239783 - Exonic hg19 BLCA TCGA-HQ-A5NE-01A 2 14 CDS-5'UTR Intra-chr q11.22 q11.21 Seq+ 16471 ChimerSeq STARFusion TCGA_RNA-Seq RB1-WDFY2 RB1 chr13 48878185 + WDFY2 chr13 52325446 + Exonic hg19 BLCA TCGA-HQ-A5NE-01A 2 12 In-Frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.3 Seq+ 16472 ChimerSeq STARFusion TCGA_RNA-Seq DAP3-TIPRL DAP3 chr1 155679615 + TIPRL chr1 168160607 + Exonic hg19 BLCA TCGA-XF-A9SY 4 19 In-Frame Intra-chr q22 q24.2 Seq+ 16473 ChimerSeq STARFusion TCGA_RNA-Seq CD59-FBXO3 CD59 chr11 33738916 - FBXO3 chr11 33776046 - Exonic hg19 BLCA TCGA-XF-A9SY 2 2 Out-of-frame Intra-chr p13 p13 Seq+ 16474 ChimerSeq STARFusion TCGA_RNA-Seq ARID4B-NTPCR ARID4B chr1 235409735 - NTPCR chr1 233113909 + Exonic hg19 BLCA TCGA-G2-A3VY-01A 13 81 Out-of-frame Intra-chr q42.3 q42.2 Seq+ 16475 ChimerSeq STARFusion TCGA_RNA-Seq NPRL3-LUC7L NPRL3 chr16 150370 - LUC7L chr16 243014 - Exonic hg19 BLCA TCGA-G2-A3VY-01A 7 34 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 16476 ChimerSeq STARFusion TCGA_RNA-Seq WDR70-CACNA2D4 WDR70 chr5 37516692 + CACNA2D4 chr12 2019131 - Exonic hg19 BLCA TCGA-G2-A3VY-01A 3 16 Out-of-frame Inter-chr p13.2 p13.33 Seq+ 16477 ChimerSeq STARFusion TCGA_RNA-Seq NUP133-CDH6 NUP133 chr1 229625702 - CDH6 chr5 31299571 + Exonic hg19 BLCA TCGA-G2-A3VY-01A 3 13 Out-of-frame Inter-chr q42.13 p13.3 Seq+ 16478 ChimerSeq STARFusion TCGA_RNA-Seq UCK2-DARS2 UCK2 chr1 165797169 + DARS2 chr1 173795825 + Exonic hg19 BLCA TCGA-G2-A3VY-01A 4 7 Out-of-frame Intra-chr q24.1 q25.1 Seq+ 16479 ChimerSeq STARFusion TCGA_RNA-Seq WDSUB1-GPD2 WDSUB1 chr2 160104883 - GPD2 chr2 157332610 + Exonic hg19 BLCA TCGA-G2-A3VY-01A 2 10 CDS-5'UTR Intra-chr q24.2 q24.1 Seq+ 16480 ChimerSeq STARFusion TCGA_RNA-Seq ZNF844-CMSS1 ZNF844 chr19 12184972 + CMSS1 chr3 99865817 + Exonic hg19 BLCA TCGA-G2-A3VY-01A 2 5 Out-of-frame Inter-chr p13.2 Transcription factor q12.1 Seq+ 16481 ChimerSeq STARFusion TCGA_RNA-Seq AMACR-C1QTNF3 AMACR chr5 34004679 - C1QTNF3 chr5 34020847 - Exonic hg19 BLCA TCGA-G2-A3VY-01A 2 3 Out-of-frame Intra-chr p13.2 p13.2 16482 ChimerSeq STARFusion TCGA_RNA-Seq BAD-MACROD1 BAD chr11 64051654 - MACROD1 chr11 63919865 - Exonic hg19 BLCA TCGA-G2-A3VY-01A 2 2 In-Frame Intra-chr q13.1 q13.1 Seq+ 16483 ChimerSeq STARFusion TCGA_RNA-Seq CHRAC1-SNTG1 CHRAC1 chr8 141521745 + SNTG1 chr8 51351103 + Exonic hg19 BLCA TCGA-G2-A3VY-01A 2 2 In-Frame Intra-chr q24.3 q11.21 Seq+ 16484 ChimerSeq STARFusion TCGA_RNA-Seq ACACA-HTRA4 ACACA chr17 35687113 - HTRA4 chr8 38845455 + Exonic hg19 BLCA TCGA-FJ-A3ZE-01A 81 229 In-Frame Inter-chr p11.22 Seq+ 16485 ChimerSeq STARFusion TCGA_RNA-Seq MIB1-CABYR MIB1 chr18 19383975 + CABYR chr18 21735665 + Exonic hg19 BLCA TCGA-FJ-A3ZE-01A 14 29 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 16486 ChimerSeq STARFusion TCGA_RNA-Seq ACACA-ADAM9 ACACA chr17 35687113 - ADAM9 chr8 38865405 + Exonic hg19 BLCA TCGA-FJ-A3ZE-01A 2 9 Out-of-frame Inter-chr Seq+ 16487 ChimerSeq STARFusion TCGA_RNA-Seq TMEM63A-FCGR2A TMEM63A chr1 226059687 - FCGR2A chr1 161487765 + Exonic hg19 BLCA TCGA-FJ-A3ZE-01A 2 4 In-Frame Intra-chr q42.12 q23.3 Seq+ 16488 ChimerSeq STARFusion TCGA_RNA-Seq POLR1D-SMYD2 POLR1D chr13 28222590 + SMYD2 chr1 214510047 + Exonic hg19 BLCA TCGA-FJ-A3ZE-01A 2 2 Out-of-frame Inter-chr q12.2 q32.3 Seq+ 16489 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1467-EMP1 KIAA1467 chr12 13229077 + EMP1 chr12 13364403 + Exonic hg19 BLCA TCGA-FJ-A3ZE-01A 2 1 CDS-5'UTR Intra-chr p13.1 Tumor suppressor gene 16490 ChimerSeq STARFusion TCGA_RNA-Seq GAK-SPON2 GAK chr4 853394 - SPON2 chr4 1173329 - Exonic hg19 BLCA TCGA-FD-A6TE-01A 4 14 CDS-5'UTR Intra-chr p16.3 Other:NAK p16.3 Seq+ 16491 ChimerSeq STARFusion TCGA_RNA-Seq PPP3CB-TTC18 PPP3CB chr10 75214170 - TTC18 chr10 75035356 - Exonic hg19 BLCA TCGA-FD-A6TE-01A 3 5 Out-of-frame Intra-chr q22.2 16492 ChimerSeq STARFusion TCGA_RNA-Seq TYW1-MIOS TYW1 chr7 66563705 + MIOS chr7 7645573 + Exonic hg19 BLCA TCGA-FD-A6TE-01A 2 1 Out-of-frame Intra-chr q11.21 p21.3 Seq+ 16493 ChimerSeq STARFusion TCGA_RNA-Seq ARAP1-SLC22A8 ARAP1 chr11 72403798 - SLC22A8 chr11 62782434 - Exonic hg19 BLCA TCGA-KQ-A41O-01A 2 11 CDS-5'UTR Intra-chr q13.4 q12.3 Seq+ 16494 ChimerSeq STARFusion TCGA_RNA-Seq LRP8-RPL14 LRP8 chr1 53793512 - RPL14 chr3 40503543 + Exonic hg19 BLCA TCGA-KQ-A41O-01A 3 1 Out-of-frame Inter-chr p32.3 p22.1 16495 ChimerSeq STARFusion TCGA_RNA-Seq DHRS2-GSTM2 DHRS2 chr14 24105981 + GSTM2 chr1 110213909 + Exonic hg19 BLCA TCGA-GV-A3QK-01B 6 11 5'UTR-CDS Inter-chr q11.2 p13.3 16496 ChimerSeq STARFusion TCGA_RNA-Seq SCAF8-TIAM2 SCAF8 chr6 155124757 + TIAM2 chr6 155561664 + Exonic hg19 BLCA TCGA-GV-A3QK-01B 4 12 Out-of-frame Intra-chr q25.2 q25.2 16497 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-GSTP1 KDM2A chr11 66888829 + GSTP1 chr11 67351605 + Exonic hg19 BLCA TCGA-GV-A3QK-01B 2 16 Out-of-frame Intra-chr q13.2 Transcription factor q13.2 Tumor suppressor gene Seq+ 16498 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-ANO1 PPFIA1 chr11 70118542 + ANO1 chr11 69962564 + Exonic hg19 BLCA TCGA-GV-A3QK-01B 3 1 In-Frame Intra-chr q13.3 q13.3 Seq+ 16499 ChimerSeq STARFusion TCGA_RNA-Seq MIRLET7BHG-HKDC1 MIRLET7BHG chr22 46494438 + HKDC1 chr10 71025341 + Exonic hg19 BLCA TCGA-FD-A6TK-01A 6 44 5'UTR-CDS Inter-chr q13.31 q22.1 Seq+ 16500 ChimerSeq STARFusion TCGA_RNA-Seq MIRLET7BHG-HKDC1 MIRLET7BHG chr22 46499129 + HKDC1 chr10 71025341 + Exonic hg19 BLCA TCGA-FD-A6TK-01A 3 44 5'UTR-CDS Inter-chr q13.31 q22.1 Seq+ 16501 ChimerSeq STARFusion TCGA_RNA-Seq COPS2-CTTN COPS2 chr15 49447722 - CTTN chr11 70251371 + Exonic hg19 BLCA TCGA-DK-A6B6-01A 4 20 CDS-5'UTR Inter-chr q21.1 Tumor suppressor gene q13.3 Seq+ 16502 ChimerSeq STARFusion TCGA_RNA-Seq ESYT1-PA2G4 ESYT1 chr12 56522493 + PA2G4 chr12 56500372 + Exonic hg19 BLCA TCGA-DK-A6B6-01A 3 8 Out-of-frame Intra-chr q13.2 q13.2 Transcription factor Seq+ 16503 ChimerSeq STARFusion TCGA_RNA-Seq PTEN-RNLS PTEN chr10 89685314 + RNLS chr10 90074398 - Exonic hg19 BLCA TCGA-DK-A6B6-01A 4 4 Out-of-frame Intra-chr q23.31 Oncogene Tumor suppressor gene q23.31 Seq+ 16504 ChimerSeq STARFusion TCGA_RNA-Seq RALGAPA2-C20orf194 RALGAPA2 chr20 20634174 - C20orf194 chr20 3251208 - Exonic hg19 BLCA TCGA-XF-A8HG-01A 15 69 In-Frame Intra-chr p11.23 p13 Seq+ 16505 ChimerSeq STARFusion TCGA_RNA-Seq RALGAPA2-C20orf194 RALGAPA2 chr20 20634174 - C20orf194 chr20 3245170 - Exonic hg19 BLCA TCGA-XF-A8HG-01A 2 69 Out-of-frame Intra-chr p11.23 p13 Seq+ 16506 ChimerSeq STARFusion TCGA_RNA-Seq C20orf194-EIF2S2 C20orf194 chr20 3230807 - EIF2S2 chr20 32680685 - Exonic hg19 BLCA TCGA-XF-A8HG-01A 10 24 Out-of-frame Intra-chr p13 q11.22 Seq+ 16507 ChimerSeq STARFusion TCGA_RNA-Seq C20orf194-EIF2S2 C20orf194 chr20 3231820 - EIF2S2 chr20 32678408 - Exonic hg19 BLCA TCGA-XF-A8HG-01A 3 24 3'UTR-CDS Intra-chr p13 q11.22 Seq+ 16508 ChimerSeq STARFusion TCGA_RNA-Seq EIF6-BANF2 EIF6 chr20 33867369 - BANF2 chr20 17716310 + Exonic hg19 BLCA TCGA-XF-A8HG-01A 3 20 Out-of-frame Intra-chr q11.22 p12.1 Seq+ 16509 ChimerSeq STARFusion TCGA_RNA-Seq PCGF3-SPATA24 PCGF3 chr4 699759 + SPATA24 chr5 138738382 - Exonic hg19 BLCA TCGA-XF-A8HG-01A 5 7 5'UTR-CDS Inter-chr p16.3 q31.2 Seq+ 16510 ChimerSeq STARFusion TCGA_RNA-Seq ADAM9-UNC5D ADAM9 chr8 38884329 + UNC5D chr8 35406810 + Exonic hg19 BLCA TCGA-XF-A8HG-01A 2 8 Out-of-frame Intra-chr p12 Tumor suppressor gene Seq+ 16511 ChimerSeq STARFusion TCGA_RNA-Seq DHRS2-GSTM2 DHRS2 chr14 24105981 + GSTM2 chr1 110213909 + Exonic hg19 BLCA TCGA-XF-A8HG-01A 2 7 5'UTR-CDS Inter-chr q11.2 p13.3 16512 ChimerSeq STARFusion TCGA_RNA-Seq CEP250-NINL CEP250 chr20 34067970 + NINL chr20 25450731 - Exonic hg19 BLCA TCGA-XF-A8HG-01A 2 4 Out-of-frame Intra-chr q11.22 p11.21 Seq+ 16513 ChimerSeq STARFusion TCGA_RNA-Seq VGLL4-LIMD1 VGLL4 chr3 11744445 - LIMD1 chr3 45707142 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 282 392 In-Frame Intra-chr p25.2 p21.31 Tumor suppressor gene Seq+ 16514 ChimerSeq STARFusion TCGA_RNA-Seq GPC3-PPARG GPC3 chrX 133087077 - PPARG chr3 12421203 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 19 36 In-Frame Inter-chr q26.2 Tumor suppressor gene p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 16515 ChimerSeq STARFusion TCGA_RNA-Seq MIER2-CDK5RAP1 MIER2 chr19 325635 - CDK5RAP1 chr20 31975339 - Exonic hg19 BLCA TCGA-BL-A0C8-01A 16 32 In-Frame Inter-chr p13.3 q11.21 Seq+ 16516 ChimerSeq STARFusion TCGA_RNA-Seq CD151-EPS8L2 CD151 chr11 836843 + EPS8L2 chr11 710422 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 11 19 Out-of-frame Intra-chr p15.5 p15.5 Seq+ 16517 ChimerSeq STARFusion TCGA_RNA-Seq PCP4L1-NDUFS2 PCP4L1 chr1 161228773 + NDUFS2 chr1 161183170 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 5 30 In-Frame Intra-chr q23.3 q23.3 Seq+ 16518 ChimerSeq STARFusion TCGA_RNA-Seq DIP2B-SPATS2 DIP2B chr12 51108379 + SPATS2 chr12 49919727 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 10 7 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 16519 ChimerSeq STARFusion TCGA_RNA-Seq TWF2-FSTL4 TWF2 chr3 52273008 - FSTL4 chr5 132569229 - Exonic hg19 BLCA TCGA-BL-A0C8-01A 8 12 Out-of-frame Inter-chr p21.2 q31.1 Seq+ 16520 ChimerSeq STARFusion TCGA_RNA-Seq SPAG9-PCMT1 SPAG9 chr17 49124736 - PCMT1 chr6 150092298 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 6 14 Out-of-frame Inter-chr q21.33 q25.1 Seq+ 16521 ChimerSeq STARFusion TCGA_RNA-Seq MRPS6-SLC5A3 MRPS6 chr21 35497780 + SLC5A3 chr21 35475134 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 7 9 CDS-3'UTR Intra-chr q22.11 q22.11 16522 ChimerSeq STARFusion TCGA_RNA-Seq MRPS23-TRIM37 MRPS23 chr17 55926601 - TRIM37 chr17 57076820 - Exonic hg19 BLCA TCGA-BL-A0C8-01A 8 3 Out-of-frame Intra-chr q22 q22 Seq+ 16523 ChimerSeq STARFusion TCGA_RNA-Seq DYNC1H1-RNA45S5 DYNC1H1 chr14 102452719 + RNA45S5 chrUn_gl000220 114052 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 4 12 Out-of-frame Inter-chr q32.31 16524 ChimerSeq STARFusion TCGA_RNA-Seq F11R-NR1I3 F11R chr1 160990800 - NR1I3 chr1 161207973 - Exonic hg19 BLCA TCGA-BL-A0C8-01A 5 5 CDS-5'UTR Intra-chr q23.3 q23.3 Transcription factor Seq+ 16525 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A2-AMACR SLC45A2 chr5 33982341 - AMACR chr5 34006004 - Exonic hg19 BLCA TCGA-BL-A0C8-01A 3 13 In-Frame Intra-chr p13.2 p13.2 KB Pub Seq+ 16526 ChimerSeq STARFusion TCGA_RNA-Seq ZNF395-RNA45S5 ZNF395 chr8 28206730 - RNA45S5 chrUn_gl000220 114028 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 5 2 Out-of-frame Inter-chr p21.1 Transcription factor 16527 ChimerSeq STARFusion TCGA_RNA-Seq TJP2-FXN TJP2 chr9 71766687 + FXN chr9 71661301 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 4 4 5'UTR-CDS Intra-chr q21.11 q21.11 Tumor suppressor gene Seq+ 16528 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-SSH1 RNA45S5 chrUn_gl000220 113463 + SSH1 chr12 109181615 - Exonic hg19 BLCA TCGA-BL-A0C8-01A 4 1 Out-of-frame Inter-chr q24.11 16529 ChimerSeq STARFusion TCGA_RNA-Seq GPC3-FOXM1 GPC3 chrX 133087077 - FOXM1 chr12 2970578 - Exonic hg19 BLCA TCGA-BL-A0C8-01A 4 0 Out-of-frame Inter-chr q26.2 Tumor suppressor gene p13.33 Transcription factor 16530 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 BLCA TCGA-BL-A0C8-01A 3 3 3'UTR-5'UTR Intra-chr q34 16531 ChimerSeq STARFusion TCGA_RNA-Seq PHF6-GPC3 PHF6 chrX 133527982 + GPC3 chrX 132888203 - Exonic hg19 BLCA TCGA-BL-A0C8-01A 3 2 In-Frame Intra-chr q26.2 Oncogene Tumor suppressor gene q26.2 Tumor suppressor gene 16532 ChimerSeq STARFusion TCGA_RNA-Seq MKRN1-DENND2A MKRN1 chr7 140171683 - DENND2A chr7 140246739 - Exonic hg19 BLCA TCGA-DK-A6B2-01A 31 178 Out-of-frame Intra-chr q34 q34 Seq+ 16533 ChimerSeq STARFusion TCGA_RNA-Seq NCOA4-MSMB NCOA4 chr10 51565296 + MSMB chr10 51555731 + Exonic hg19 BLCA TCGA-DK-A6B2-01A 45 119 5'UTR-CDS Intra-chr q11.22 Oncogene Tumor suppressor gene q11.22 Tumor suppressor gene Seq+ 16534 ChimerSeq STARFusion TCGA_RNA-Seq PCGF3-MYL5 PCGF3 chr4 738476 + MYL5 chr4 674298 + Exonic hg19 BLCA TCGA-DK-A6B2-01A 30 169 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 16535 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN15-HK1 TSPAN15 chr10 71258152 + HK1 chr10 71103583 + Exonic hg19 BLCA TCGA-DK-A6B2-01A 24 148 In-Frame Intra-chr q22.1 q22.1 Seq+ 16536 ChimerSeq STARFusion TCGA_RNA-Seq SERINC2-PFDN2 SERINC2 chr1 31886151 + PFDN2 chr1 161072165 - Exonic hg19 BLCA TCGA-DK-A6B2-01A 26 139 In-Frame Intra-chr p35.2 q23.3 Seq+ 16537 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN15-HK1 TSPAN15 chr10 71265996 + HK1 chr10 71103583 + Exonic hg19 BLCA TCGA-DK-A6B2-01A 7 148 In-Frame Intra-chr q22.1 q22.1 Seq+ 16538 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN15-HK1 TSPAN15 chr10 71264241 + HK1 chr10 71103583 + Exonic hg19 BLCA TCGA-DK-A6B2-01A 7 148 In-Frame Intra-chr q22.1 q22.1 Seq+ 16539 ChimerSeq STARFusion TCGA_RNA-Seq SENP2-ABR SENP2 chr3 185307957 + ABR chr17 915225 - Exonic hg19 BLCA TCGA-DK-A6B2-01A 14 43 Out-of-frame Inter-chr q27.2 p13.3 Seq+ 16540 ChimerSeq STARFusion TCGA_RNA-Seq EPS15L1-BCAR4 EPS15L1 chr19 16582724 - BCAR4 chr16 11914154 - Exonic hg19 BLCA TCGA-DK-A6B2-01A 14 32 3'UTR-3'UTR Inter-chr p13.11 p13.13 Seq+ 16541 ChimerSeq STARFusion TCGA_RNA-Seq POGZ-LOC283914 POGZ chr1 151414557 - LOC283914 chr16 34614340 + Exonic hg19 BLCA TCGA-DK-A6B2-01A 2 56 CDS-5'UTR Inter-chr q21.3 16542 ChimerSeq STARFusion TCGA_RNA-Seq POGZ-LOC283914 POGZ chr1 151414557 - LOC283914 chr16 34620250 + Exonic hg19 BLCA TCGA-DK-A6B2-01A 2 56 CDS-5'UTR Inter-chr q21.3 16543 ChimerSeq STARFusion TCGA_RNA-Seq EPS15L1-BCAR4 EPS15L1 chr19 16582724 - BCAR4 chr16 11915612 - Exonic hg19 BLCA TCGA-DK-A6B2-01A 2 32 3'UTR-3'UTR Inter-chr p13.11 p13.13 Seq+ 16544 ChimerSeq STARFusion TCGA_RNA-Seq FBLN1-SMC1B FBLN1 chr22 45898944 + SMC1B chr22 45804779 - Exonic hg19 BLCA TCGA-DK-A6B2-01A 7 9 In-Frame Intra-chr q13.31 Tumor suppressor gene q13.31 Seq+ 16545 ChimerSeq STARFusion TCGA_RNA-Seq TOP2B-NGLY1 TOP2B chr3 25683813 - NGLY1 chr3 25775473 - Exonic hg19 BLCA TCGA-DK-A6B2-01A 4 19 Out-of-frame Intra-chr p24.2 p24.2 Seq+ 16546 ChimerSeq STARFusion TCGA_RNA-Seq TOP2B-NGLY1 TOP2B chr3 25654006 - NGLY1 chr3 25775473 - Exonic hg19 BLCA TCGA-DK-A6B2-01A 2 19 In-Frame Intra-chr p24.2 p24.2 Seq+ 16547 ChimerSeq STARFusion TCGA_RNA-Seq AP2A2-TSPAN4 AP2A2 chr11 926088 + TSPAN4 chr11 864437 + Exonic hg19 BLCA TCGA-DK-A6B2-01A 3 13 Out-of-frame Intra-chr p15.5 p15.5 Seq+ 16548 ChimerSeq STARFusion TCGA_RNA-Seq GMEB1-TRNAU1AP GMEB1 chr1 29019557 + TRNAU1AP chr1 28887145 + Exonic hg19 BLCA TCGA-DK-A6B2-01A 4 6 In-Frame Intra-chr p35.3 Transcription factor p35.3 Seq+ 16549 ChimerSeq STARFusion TCGA_RNA-Seq SAMD13-PRKACB SAMD13 chr1 84768970 + PRKACB chr1 84662299 + Exonic hg19 BLCA TCGA-DK-A6B2-01A 2 11 In-Frame Intra-chr p31.1 p31.1 Seq+ 16550 ChimerSeq STARFusion TCGA_RNA-Seq NUP188-LRRC8A NUP188 chr9 131710030 + LRRC8A chr9 131678375 + Exonic hg19 BLCA TCGA-DK-A6B2-01A 4 1 Out-of-frame Intra-chr q34.11 q34.11 16551 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC9-PLAT TRAPPC9 chr8 141370149 - PLAT chr8 42033669 - Exonic hg19 BLCA TCGA-CF-A47X-01A 2 6 Out-of-frame Intra-chr q24.3 p11.21 Seq+ 16552 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-LOC100507412 RCC1 chr1 28834672 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BLCA TCGA-CF-A47X-01A 2 0 5'UTR-5'UTR Inter-chr p35.3 16553 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-LOC100507412 SNHG3 chr1 28834672 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BLCA TCGA-CF-A47X-01A 2 0 5'UTR-5'UTR Inter-chr p35.3 16554 ChimerSeq STARFusion TCGA_RNA-Seq VGLL4-LIMD1 VGLL4 chr3 11744445 - LIMD1 chr3 45707142 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 163 421 In-Frame Intra-chr p25.2 p21.31 Tumor suppressor gene Seq+ 16555 ChimerSeq STARFusion TCGA_RNA-Seq MIER2-CDK5RAP1 MIER2 chr19 325635 - CDK5RAP1 chr20 31975339 - Exonic hg19 BLCA TCGA-BL-A0C8-01A 51 65 In-Frame Inter-chr p13.3 q11.21 Seq+ 16556 ChimerSeq STARFusion TCGA_RNA-Seq GPC3-PPARG GPC3 chrX 133087077 - PPARG chr3 12421203 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 17 100 In-Frame Inter-chr q26.2 Tumor suppressor gene p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 16557 ChimerSeq STARFusion TCGA_RNA-Seq CD151-EPS8L2 CD151 chr11 836843 + EPS8L2 chr11 710422 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 17 56 Out-of-frame Intra-chr p15.5 p15.5 Seq+ 16558 ChimerSeq STARFusion TCGA_RNA-Seq DIP2B-SPATS2 DIP2B chr12 51108379 + SPATS2 chr12 49919727 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 18 41 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 16559 ChimerSeq STARFusion TCGA_RNA-Seq PCP4L1-NDUFS2 PCP4L1 chr1 161228773 + NDUFS2 chr1 161183170 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 9 61 In-Frame Intra-chr q23.3 q23.3 Seq+ 16560 ChimerSeq STARFusion TCGA_RNA-Seq CD151-EPS8L2 CD151 chr11 836843 + EPS8L2 chr11 710427 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 3 56 Out-of-frame Intra-chr p15.5 p15.5 Seq+ 16561 ChimerSeq STARFusion TCGA_RNA-Seq DIP2B-SPATS2 DIP2B chr12 51108379 + SPATS2 chr12 49919861 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 3 41 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 16562 ChimerSeq STARFusion TCGA_RNA-Seq SNX30-PXT1 SNX30 chr9 115600977 + PXT1 chr6 36393868 - Exonic hg19 BLCA TCGA-BL-A0C8-01A 7 24 CDS-5'UTR Inter-chr q32 p21.31 Seq+ 16563 ChimerSeq STARFusion TCGA_RNA-Seq MRPS23-TRIM37 MRPS23 chr17 55926601 - TRIM37 chr17 57076820 - Exonic hg19 BLCA TCGA-BL-A0C8-01A 6 19 Out-of-frame Intra-chr q22 q22 Seq+ 16564 ChimerSeq STARFusion TCGA_RNA-Seq TWF2-FSTL4 TWF2 chr3 52273008 - FSTL4 chr5 132569229 - Exonic hg19 BLCA TCGA-BL-A0C8-01A 3 15 Out-of-frame Inter-chr p21.2 q31.1 Seq+ 16565 ChimerSeq STARFusion TCGA_RNA-Seq GRHL2-FAM49A GRHL2 chr8 102661727 + FAM49A chr2 16769397 - Exonic hg19 BLCA TCGA-BL-A0C8-01A 2 13 CDS-5'UTR Inter-chr q22.3 Transcription factor p24.2 Seq+ 16566 ChimerSeq STARFusion TCGA_RNA-Seq TJP2-FXN TJP2 chr9 71766687 + FXN chr9 71661301 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 3 5 5'UTR-CDS Intra-chr q21.11 q21.11 Tumor suppressor gene Seq+ 16567 ChimerSeq STARFusion TCGA_RNA-Seq ZNF462-TBCA ZNF462 chr9 109701388 + TBCA chr5 77004172 - Exonic hg19 BLCA TCGA-BL-A0C8-01A 2 5 Out-of-frame Inter-chr q31.2 Transcription factor q14.1 Seq+ 16568 ChimerSeq STARFusion TCGA_RNA-Seq FREM1-SLAMF7 FREM1 chr9 14851282 - SLAMF7 chr1 160717984 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 2 2 Out-of-frame Inter-chr p22.3 q23.3 Seq+ 16569 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 BLCA TCGA-BL-A0C8-01A 2 2 3'UTR-5'UTR Intra-chr q34 16570 ChimerSeq STARFusion TCGA_RNA-Seq PIGG-AMACR PIGG chr4 502759 + AMACR chr5 34006004 - Exonic hg19 BLCA TCGA-BL-A0C8-01A 2 0 In-Frame Inter-chr p16.3 p13.2 16571 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A2-AMACR SLC45A2 chr5 33982341 - AMACR chr5 34006004 - Exonic hg19 BLCA TCGA-BL-A0C8-01A 2 0 In-Frame Intra-chr p13.2 p13.2 KB Pub Seq+ 16572 ChimerSeq STARFusion TCGA_RNA-Seq FAR2-AGMO FAR2 chr12 29474857 + AGMO chr7 15240984 - Exonic hg19 BLCA TCGA-KQ-A41Q-01A 5 22 In-Frame Inter-chr p11.22 p21.2 Seq+ 16573 ChimerSeq STARFusion TCGA_RNA-Seq YWHAB-ISPD YWHAB chr20 43514527 + ISPD chr7 16415866 - Exonic hg19 BLCA TCGA-KQ-A41Q-01A 6 18 5'UTR-CDS Inter-chr q13.12 p21.2 Seq+ 16574 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-VPS13B PTK2 chr8 141753329 - VPS13B chr8 100673582 + Exonic hg19 BLCA TCGA-KQ-A41Q-01A 6 8 In-Frame Intra-chr q24.3 q22.2 Seq+ 16575 ChimerSeq STARFusion TCGA_RNA-Seq YWHAB-ISPD YWHAB chr20 43514527 + ISPD chr7 16348252 - Exonic hg19 BLCA TCGA-KQ-A41Q-01A 2 18 5'UTR-CDS Inter-chr q13.12 p21.2 Seq+ 16576 ChimerSeq STARFusion TCGA_RNA-Seq STXBP6-SLC44A4 STXBP6 chr14 25443871 - SLC44A4 chr6_dbb_hap3 3130441 - Exonic hg19 BLCA TCGA-KQ-A41Q-01A 4 3 CDS-3'UTR Inter-chr q12 Seq+ 16577 ChimerSeq STARFusion TCGA_RNA-Seq ITCH-AHCY ITCH chr20 32981687 + AHCY chr20 32883391 - Exonic hg19 BLCA TCGA-BT-A20V-01A 18 37 In-Frame Intra-chr q11.22 q11.22 Seq+ 16578 ChimerSeq STARFusion TCGA_RNA-Seq VAC14-WWOX VAC14 chr16 70765398 - WWOX chr16 79245505 + Exonic hg19 BLCA TCGA-BT-A20V-01A 14 44 Out-of-frame Intra-chr q22.2 q23.1 Tumor suppressor gene Seq+ 16579 ChimerSeq STARFusion TCGA_RNA-Seq VAC14-WWOX VAC14 chr16 70732540 - WWOX chr16 79245505 + Exonic hg19 BLCA TCGA-BT-A20V-01A 4 44 In-Frame Intra-chr q22.2 q23.1 Tumor suppressor gene Seq+ 16580 ChimerSeq STARFusion TCGA_RNA-Seq KDM4C-IFNA22P KDM4C chr9 6990524 + IFNA22P chr9 21278426 - Exonic hg19 BLCA TCGA-BT-A20V-01A 6 13 CDS-3'UTR Intra-chr p24.1 p21.3 Seq+ 16581 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0947-LOC285696 KIAA0947 chr5 5476192 + LOC285696 chr5 17162674 - Exonic hg19 BLCA TCGA-BT-A20V-01A 4 4 CDS-3'UTR Intra-chr 16582 ChimerSeq STARFusion TCGA_RNA-Seq POLR3H-ACO2 POLR3H chr22 41939995 - ACO2 chr22 41903795 + Exonic hg19 BLCA TCGA-BT-A20V-01A 2 2 CDS-5'UTR Intra-chr q13.2 q13.2 Seq+ 16583 ChimerSeq STARFusion TCGA_RNA-Seq NUMB-TTLL5 NUMB chr14 73759442 - TTLL5 chr14 76286350 + Exonic hg19 BLCA TCGA-YF-AA3L-01A 4 5 In-Frame Intra-chr q24.3 Tumor suppressor gene q24.3 Seq+ 16584 ChimerSeq STARFusion TCGA_RNA-Seq PFDN2-NIT1 PFDN2 chr1 161087742 - NIT1 chr1 161088576 + Exonic hg19 BLCA TCGA-UY-A9PH-01A 4 51 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 16585 ChimerSeq STARFusion TCGA_RNA-Seq PFDN2-NIT1 PFDN2 chr1 161087742 - NIT1 chr1 161088924 + Exonic hg19 BLCA TCGA-UY-A9PH-01A 2 51 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 16586 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-SHANK2 PPFIA1 chr11 70118542 + SHANK2 chr11 70666787 - Exonic hg19 BLCA TCGA-UY-A9PH-01A 9 20 Out-of-frame Intra-chr q13.3 q13.4 Seq+ 16587 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-SHANK2 CTTN chr11 70256066 + SHANK2 chr11 70336492 - Exonic hg19 BLCA TCGA-UY-A9PH-01A 7 8 In-Frame Intra-chr q13.3 q13.4 Seq+ 16588 ChimerSeq STARFusion TCGA_RNA-Seq DIP2A-C16orf46 DIP2A chr21 47904741 + C16orf46 chr16 81087699 - Exonic hg19 BLCA TCGA-FD-A5C0-01A 44 216 Out-of-frame Inter-chr q22.3 q23.2 Seq+ 16589 ChimerSeq STARFusion TCGA_RNA-Seq DIP2A-C16orf46 DIP2A chr21 47904741 + C16orf46 chr16 81097598 - Exonic hg19 BLCA TCGA-FD-A5C0-01A 7 216 CDS-5'UTR Inter-chr q22.3 q23.2 Seq+ 16590 ChimerSeq STARFusion TCGA_RNA-Seq YAP1-BIRC3 YAP1 chr11 102076805 + BIRC3 chr11 102196197 + Exonic hg19 BLCA TCGA-FD-A5C0-01A 2 1 Out-of-frame Intra-chr q22.1 Tumor suppressor gene q22.2 Oncogene 16591 ChimerSeq STARFusion TCGA_RNA-Seq GAS2L3-MED13L GAS2L3 chr12 100995531 + MED13L chr12 116404048 - Exonic hg19 BLCA TCGA-FD-A6TB-01A 5 35 In-Frame Intra-chr q23.1 q24.21 Seq+ 16592 ChimerSeq STARFusion TCGA_RNA-Seq VGLL4-LIMD1 VGLL4 chr3 11744445 - LIMD1 chr3 45707142 + Exonic hg19 BLCA TCGA-BL-A0C8-01B 146 177 In-Frame Intra-chr p25.2 p21.31 Tumor suppressor gene Seq+ 16593 ChimerSeq STARFusion TCGA_RNA-Seq MIER2-CDK5RAP1 MIER2 chr19 325635 - CDK5RAP1 chr20 31975339 - Exonic hg19 BLCA TCGA-BL-A0C8-01B 16 26 In-Frame Inter-chr p13.3 q11.21 Seq+ 16594 ChimerSeq STARFusion TCGA_RNA-Seq SPAG9-PCMT1 SPAG9 chr17 49124736 - PCMT1 chr6 150092298 + Exonic hg19 BLCA TCGA-BL-A0C8-01B 13 22 Out-of-frame Inter-chr q21.33 q25.1 Seq+ 16595 ChimerSeq STARFusion TCGA_RNA-Seq CD151-EPS8L2 CD151 chr11 836843 + EPS8L2 chr11 710422 + Exonic hg19 BLCA TCGA-BL-A0C8-01B 11 18 Out-of-frame Intra-chr p15.5 p15.5 Seq+ 16596 ChimerSeq STARFusion TCGA_RNA-Seq DIP2B-SPATS2 DIP2B chr12 51108379 + SPATS2 chr12 49919727 + Exonic hg19 BLCA TCGA-BL-A0C8-01B 6 18 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 16597 ChimerSeq STARFusion TCGA_RNA-Seq F11R-NR1I3 F11R chr1 160990800 - NR1I3 chr1 161207973 - Exonic hg19 BLCA TCGA-BL-A0C8-01B 6 10 CDS-5'UTR Intra-chr q23.3 q23.3 Transcription factor Seq+ 16598 ChimerSeq STARFusion TCGA_RNA-Seq SNX30-PXT1 SNX30 chr9 115600977 + PXT1 chr6 36393868 - Exonic hg19 BLCA TCGA-BL-A0C8-01B 6 9 CDS-5'UTR Inter-chr q32 p21.31 Seq+ 16599 ChimerSeq STARFusion TCGA_RNA-Seq GPC3-PPARG GPC3 chrX 133087077 - PPARG chr3 12421203 + Exonic hg19 BLCA TCGA-BL-A0C8-01B 6 6 In-Frame Inter-chr q26.2 Tumor suppressor gene p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 16600 ChimerSeq STARFusion TCGA_RNA-Seq PCP4L1-NDUFS2 PCP4L1 chr1 161228773 + NDUFS2 chr1 161183170 + Exonic hg19 BLCA TCGA-BL-A0C8-01B 5 0 In-Frame Intra-chr q23.3 q23.3 Seq+ 16601 ChimerSeq STARFusion TCGA_RNA-Seq GPC3-PPARG GPC3 chrX 133087077 - PPARG chr3 12353879 + Exonic hg19 BLCA TCGA-BL-A0C8-01B 2 6 CDS-5'UTR Inter-chr q26.2 Tumor suppressor gene p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 16602 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 BLCA TCGA-BL-A0C8-01B 2 1 3'UTR-5'UTR Intra-chr q34 16603 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R2-UBXN7 PPP1R2 chr3 195250490 - UBXN7 chr3 196098913 - Exonic hg19 BLCA TCGA-BL-A0C8-01B 2 1 Out-of-frame Intra-chr q29 q29 16604 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 BLCA TCGA-CF-A47S-01A 2593 8248 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 16605 ChimerSeq STARFusion TCGA_RNA-Seq UHMK1-RNA45S5 UHMK1 chr1 162467667 + RNA45S5 chrUn_gl000220 113633 + Exonic hg19 BLCA TCGA-BL-A13I-01B 15 1 Out-of-frame Inter-chr q23.3 16606 ChimerSeq STARFusion TCGA_RNA-Seq NCOA2-FAM150A NCOA2 chr8 71208979 - FAM150A chr8 53455005 - Exonic hg19 BLCA TCGA-GV-A6ZA-01A 3 28 5'UTR-CDS Intra-chr q13.3 Oncogene Transcription factor Seq+ 16607 ChimerSeq STARFusion TCGA_RNA-Seq TADA2A-PLXDC1 TADA2A chr17 35767040 + PLXDC1 chr17 37239793 - Exonic hg19 BLCA TCGA-HQ-A2OF-01A 28 49 5'UTR-CDS Intra-chr q12 q12 Seq+ 16608 ChimerSeq STARFusion TCGA_RNA-Seq SOCS7-MAPT SOCS7 chr17 36508915 + MAPT chr17_ctg5_hap1 766656 - Exonic hg19 BLCA TCGA-HQ-A2OF-01A 23 27 CDS-5'UTR Inter-chr q12 Seq+ 16609 ChimerSeq STARFusion TCGA_RNA-Seq TADA2A-PLXDC1 TADA2A chr17 35767583 + PLXDC1 chr17 37239793 - Exonic hg19 BLCA TCGA-HQ-A2OF-01A 5 49 5'UTR-CDS Intra-chr q12 q12 Seq+ 16610 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 81083660 - MRPS28 chr8 80831383 - Exonic hg19 BLCA TCGA-HQ-A2OF-01A 8 33 Out-of-frame Intra-chr q21.13 q21.13 16611 ChimerSeq STARFusion TCGA_RNA-Seq HOXB3-MAPT HOXB3 chr17 46651199 - MAPT chr17 44068826 + Exonic hg19 BLCA TCGA-HQ-A2OF-01A 3 28 5'UTR-CDS Intra-chr q21.32 Transcription factor Seq+ 16612 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP23-GOSR2 ARHGAP23 chr17 36656870 + GOSR2 chr17 45009433 + Exonic hg19 BLCA TCGA-HQ-A2OF-01A 3 24 Out-of-frame Intra-chr q12 q21.32 Seq+ 16613 ChimerSeq STARFusion TCGA_RNA-Seq MBTD1-SRCIN1 MBTD1 chr17 49270143 - SRCIN1 chr17 36735044 - Exonic hg19 BLCA TCGA-HQ-A2OF-01A 4 16 In-Frame Intra-chr q21.33 q12 Seq+ 16614 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890980 - BCAR4 chr16 11914154 - Exonic hg19 BLCA TCGA-HQ-A2OF-01A 5 12 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 16615 ChimerSeq STARFusion TCGA_RNA-Seq NPEPPS-IKZF3 NPEPPS chr17 45664710 + IKZF3 chr17 37949186 - Exonic hg19 BLCA TCGA-HQ-A2OF-01A 4 13 Out-of-frame Intra-chr q21.32 q21.1 Tumor suppressor gene Transcription factor Seq+ 16616 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-ACACA GRB7 chr17 37902455 + ACACA chr17 35567404 - Exonic hg19 BLCA TCGA-HQ-A2OF-01A 4 12 Out-of-frame Intra-chr q12 Seq+ 16617 ChimerSeq STARFusion TCGA_RNA-Seq MRPL10-MTPAP MRPL10 chr17 45904003 - MTPAP chr10 30611546 - Exonic hg19 BLCA TCGA-HQ-A2OF-01A 4 11 Out-of-frame Inter-chr q21.32 p11.23 Seq+ 16618 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890980 - BCAR4 chr16 11915612 - Exonic hg19 BLCA TCGA-HQ-A2OF-01A 2 12 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 16619 ChimerSeq STARFusion TCGA_RNA-Seq GPATCH8-STAC2 GPATCH8 chr17 42541840 - STAC2 chr17 37374426 - Exonic hg19 BLCA TCGA-HQ-A2OF-01A 3 7 Out-of-frame Intra-chr q21.31 q12 Seq+ 16620 ChimerSeq STARFusion TCGA_RNA-Seq HOXB3-MAPT HOXB3 chr17 46651199 - MAPT chr17_ctg5_hap1 798922 - Exonic hg19 BLCA TCGA-HQ-A2OF-01A 2 2 5'UTR-5'UTR Inter-chr q21.32 Transcription factor Seq+ 16621 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125699 - CXCL16 chr17 4637313 - Exonic hg19 BLCA TCGA-GU-AATO 7 8 Out-of-frame Inter-chr q12.2 p13.2 16622 ChimerSeq STARFusion TCGA_RNA-Seq LPCAT2-CLEC3A LPCAT2 chr16 55585014 + CLEC3A chr16 78085855 + Exonic hg19 BLCA TCGA-GU-AATO 2 0 CDS-3'UTR Intra-chr q12.2 q23.1 16623 ChimerSeq STARFusion TCGA_RNA-Seq ADAM10-C15orf43 ADAM10 chr15 59009776 - C15orf43 chr15 45266065 + Exonic hg19 BLCA TCGA-4Z-AA7R 7 26 3'UTR-CDS Intra-chr q21.3 Seq+ 16624 ChimerSeq STARFusion TCGA_RNA-Seq SWT1-DCAF8 SWT1 chr1 185159774 + DCAF8 chr1 160195453 - Exonic hg19 BLCA TCGA-4Z-AA7R 6 13 In-Frame Intra-chr q25.3 q23.2 Seq+ 16625 ChimerSeq STARFusion TCGA_RNA-Seq SWT1-DCAF8 SWT1 chr1 185159774 + DCAF8 chr1 160195453 - Exonic hg19 BLCA TCGA-4Z-AA7R 6 13 In-Frame Intra-chr q25.3 q23.2 Seq+ 16626 ChimerSeq STARFusion TCGA_RNA-Seq CDKAL1-OFCC1 CDKAL1 chr6 20548936 + OFCC1 chr6 9850702 - Exonic hg19 BLCA TCGA-4Z-AA7R 3 2 Out-of-frame Intra-chr p22.3 p24.3 Seq+ 16627 ChimerSeq STARFusion TCGA_RNA-Seq MSL2-STAG1 MSL2 chr3 135913814 - STAG1 chr3 136349823 - Exonic hg19 BLCA TCGA-4Z-AA7R 2 4 CDS-5'UTR Intra-chr q22.3 q22.3 Seq+ 16628 ChimerSeq STARFusion TCGA_RNA-Seq CDKAL1-DNAH8 CDKAL1 chr6 20535625 + DNAH8 chr6 38850686 + Exonic hg19 BLCA TCGA-DK-AA6U 7 21 5'UTR-CDS Intra-chr p22.3 p21.2 Seq+ 16629 ChimerSeq STARFusion TCGA_RNA-Seq GPR110-TNFRSF21 GPR110 chr6 47009927 - TNFRSF21 chr6 47202634 - Exonic hg19 BLCA TCGA-DK-AA6U 7 12 5'UTR-CDS Intra-chr p12.3 Seq+ 16630 ChimerSeq STARFusion TCGA_RNA-Seq URI1-ZNF536 URI1 chr19 30433571 + ZNF536 chr19 30774979 + Exonic hg19 BLCA TCGA-DK-AA6U 2 7 5'UTR-5'UTR Intra-chr q12 q12 Transcription factor 16631 ChimerSeq STARFusion TCGA_RNA-Seq URI1-SLC35F1 URI1 chr19 30477324 + SLC35F1 chr6 118596622 + Exonic hg19 BLCA TCGA-DK-AA6U 2 5 In-Frame Inter-chr q12 q22.2 Seq+ 16632 ChimerSeq STARFusion TCGA_RNA-Seq ACOX1-PPP2R3B ACOX1 chr17 73974615 - PPP2R3B chrX 322325 - Exonic hg19 BLCA TCGA-DK-AA6U 2 2 Out-of-frame Inter-chr q25.1 p22.33 Seq+ 16633 ChimerSeq STARFusion TCGA_RNA-Seq UPF1-CRTC1 UPF1 chr19 18963880 + CRTC1 chr19 18864310 + Exonic hg19 BLCA TCGA-DK-AA6W 3 28 In-Frame Intra-chr p13.11 p13.11 Oncogene Seq+ 16634 ChimerSeq STARFusion TCGA_RNA-Seq SMYD3-ZNF670 SMYD3 chr1 246670356 - ZNF670 chr1 247109129 - Exonic hg19 BLCA TCGA-DK-AA6W 5 14 CDS-3'UTR Intra-chr q44 Transcription factor q44 Transcription factor 16635 ChimerSeq STARFusion TCGA_RNA-Seq SMYD3-ZNF695 SMYD3 chr1 246670356 - ZNF695 chr1 247109129 - Exonic hg19 BLCA TCGA-DK-AA6W 5 14 In-Frame Intra-chr q44 Transcription factor q44 Transcription factor Seq+ 16636 ChimerSeq STARFusion TCGA_RNA-Seq ELF1-UBL3 ELF1 chr13 41634974 - UBL3 chr13 30351400 - Exonic hg19 BLCA TCGA-DK-AA6P 12 17 5'UTR-CDS Intra-chr q14.11 Transcription factor q12.3 Seq+ 16637 ChimerSeq STARFusion TCGA_RNA-Seq ATP8A2-ALG5 ATP8A2 chr13 26436546 + ALG5 chr13 37559877 - Exonic hg19 BLCA TCGA-DK-AA6P 7 16 In-Frame Intra-chr q12.13 q13.3 Seq+ 16638 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF10L-PADI4 ARHGEF10L chr1 18021775 + PADI4 chr1 17668438 + Exonic hg19 BLCA TCGA-DK-AA6P 4 13 In-Frame Intra-chr p36.13 Seq+ 16639 ChimerSeq STARFusion TCGA_RNA-Seq B3GALTL-ALOX5AP B3GALTL chr13 31898032 + ALOX5AP chr13 31330081 + Exonic hg19 BLCA TCGA-DK-AA6P 2 20 Out-of-frame Intra-chr q12.3 Seq+ 16640 ChimerSeq STARFusion TCGA_RNA-Seq MAN1C1-TMEM50A MAN1C1 chr1 26090458 + TMEM50A chr1 25687151 + Exonic hg19 BLCA TCGA-DK-AA6P 3 15 Out-of-frame Intra-chr p36.11 p36.11 Seq+ 16641 ChimerSeq STARFusion TCGA_RNA-Seq HIVEP2-AHI1 HIVEP2 chr6 143158072 - AHI1 chr6 135639754 - Exonic hg19 BLCA TCGA-DK-AA6P 3 8 5'UTR-CDS Intra-chr q24.2 Transcription factor q23.3 Seq+ 16642 ChimerSeq STARFusion TCGA_RNA-Seq HIVEP2-AHI1 HIVEP2 chr6 143158072 - AHI1 chr6 135644462 - Exonic hg19 BLCA TCGA-DK-AA6P 2 8 5'UTR-CDS Intra-chr q24.2 Transcription factor q23.3 Seq+ 16643 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57733388 + VMP1 chr17 57895073 + Exonic hg19 BLCA TCGA-DK-AA6R 7 62 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 16644 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57697534 + VMP1 chr17 57915656 + Exonic hg19 BLCA TCGA-DK-AA6R 4 62 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 16645 ChimerSeq STARFusion TCGA_RNA-Seq DCP2-TBCA DCP2 chr5 112312683 + TBCA chr5 77004172 - Exonic hg19 BLCA TCGA-GV-A3JW-01A 23 149 In-Frame Intra-chr q22.2 q14.1 Seq+ 16646 ChimerSeq STARFusion TCGA_RNA-Seq MPDU1-GUCD1 MPDU1 chr17 7487283 + GUCD1 chr22 24944969 - Exonic hg19 BLCA TCGA-GV-A3JW-01A 9 32 Out-of-frame Inter-chr p13.1 q11.23 Seq+ 16647 ChimerSeq STARFusion TCGA_RNA-Seq SNX29-NCAN SNX29 chr16 12121301 + NCAN chr19 19344598 + Exonic hg19 BLCA TCGA-GV-A3JW-01A 9 17 In-Frame Inter-chr p13.13 p13.11 Seq+ 16648 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL10-GPD1L OSBPL10 chr3 31917925 - GPD1L chr3 32207306 + Exonic hg19 BLCA TCGA-GV-A3JW-01A 3 38 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 16649 ChimerSeq STARFusion TCGA_RNA-Seq MPDU1-GUCD1 MPDU1 chr17 7487283 + GUCD1 chr22 24944041 - Exonic hg19 BLCA TCGA-GV-A3JW-01A 2 32 Out-of-frame Inter-chr p13.1 q11.23 Seq+ 16650 ChimerSeq STARFusion TCGA_RNA-Seq DCLRE1C-NMT2 DCLRE1C chr10 14991035 - NMT2 chr10 15170457 - Exonic hg19 BLCA TCGA-GV-A3JW-01A 6 3 In-Frame Intra-chr p13 p13 Seq+ 16651 ChimerSeq STARFusion TCGA_RNA-Seq KIDINS220-EYS KIDINS220 chr2 8910800 - EYS chr6 64709076 - Exonic hg19 BLCA TCGA-GV-A3JW-01A 2 10 In-Frame Inter-chr p25.1 q12 Seq+ 16652 ChimerSeq STARFusion TCGA_RNA-Seq NSUN2-TBL1Y NSUN2 chr5 6632712 - TBL1Y chrY 6948773 + Exonic hg19 BLCA TCGA-GV-A3JW-01A 2 3 Out-of-frame Inter-chr p15.31 p11.2 Seq+ 16653 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC20-EFHA1 ZDHHC20 chr13 21974512 - EFHA1 chr13 22088557 - Exonic hg19 BLCA TCGA-GV-A3JW-01A 2 3 In-Frame Intra-chr q12.11 Seq+ 16654 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-HM13 TPX2 chr20 30327424 + HM13 chr20 30115287 + Exonic hg19 BLCA TCGA-GV-A3JW-01A 2 1 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 16655 ChimerSeq STARFusion TCGA_RNA-Seq MLLT3-FOCAD MLLT3 chr9 20620653 - FOCAD chr9 20820323 + Exonic hg19 BLCA TCGA-BT-A20P-01A 2 1 Out-of-frame Intra-chr p21.3 p21.3 16656 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-ERBB2 GRB7 chr17 37894386 + ERBB2 chr17 37844949 + Exonic hg19 BLCA TCGA-GU-AATP 3 6 5'UTR-5'UTR Intra-chr q12 q12 Oncogene Seq+ 16657 ChimerSeq STARFusion TCGA_RNA-Seq NF1-SPACA3 NF1 chr17 29497015 + SPACA3 chr17 31323861 + Exonic hg19 BLCA TCGA-DK-AA6X 7 11 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 16658 ChimerSeq STARFusion TCGA_RNA-Seq MPP5-GPHN MPP5 chr14 67779427 + GPHN chr14 67646295 + Exonic hg19 BLCA TCGA-FD-A3N6-01A 8 10 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 16659 ChimerSeq STARFusion TCGA_RNA-Seq SFN-YWHAG SFN chr1 27190112 + YWHAG chr7 75959255 - Exonic hg19 BLCA TCGA-FD-A3N6-01A 5 2 Out-of-frame Inter-chr p36.11 Tumor suppressor gene q11.23 16660 ChimerSeq STARFusion TCGA_RNA-Seq FAM49B-AK5 FAM49B chr8 130915558 - AK5 chr1 77949002 + Exonic hg19 BLCA TCGA-DK-A3IM-01A 3 22 5'UTR-CDS Inter-chr q24.21 p31.1 Seq+ 16661 ChimerSeq STARFusion TCGA_RNA-Seq MARS-NOP2 MARS chr12 57898082 + NOP2 chr12 6673112 - Exonic hg19 BLCA TCGA-DK-A3IM-01A 3 17 In-Frame Intra-chr q13.3 p13.31 Seq+ 16662 ChimerSeq STARFusion TCGA_RNA-Seq RAB11FIP1-KCNU1 RAB11FIP1 chr8 37756589 - KCNU1 chr8 36763226 + Exonic hg19 BLCA TCGA-FT-A3EE-01A 28 108 In-Frame Intra-chr p11.23 p11.23 Seq+ 16663 ChimerSeq STARFusion TCGA_RNA-Seq GPR124-GSR GPR124 chr8 37691646 + GSR chr8 30569605 - Exonic hg19 BLCA TCGA-FT-A3EE-01A 6 39 In-Frame Intra-chr p12 16664 ChimerSeq STARFusion TCGA_RNA-Seq CCBP2-KRBOX1 CCBP2 chr3 42861203 + KRBOX1 chr3 42980342 + Exonic hg19 BLCA TCGA-FT-A3EE-01A 2 3 5'UTR-5'UTR Intra-chr p22.1 Seq+ 16665 ChimerSeq STARFusion TCGA_RNA-Seq CHD2-LOC100507217 CHD2 chr15 93444529 + LOC100507217 chr15 93428745 + Exonic hg19 BLCA TCGA-FT-A3EE-01A 2 1 CDS-5'UTR Intra-chr q26.1 16666 ChimerSeq STARFusion TCGA_RNA-Seq CCSER1-BMP2K CCSER1 chr4 91321280 + BMP2K chr4 79754736 + Exonic hg19 BLCA TCGA-LT-A5Z6-01A 4 17 Out-of-frame Intra-chr q22.1 q21.21 Seq+ 16667 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHG3-MTHFD1 PLEKHG3 chr14 65199619 + MTHFD1 chr14 64924932 + Exonic hg19 BLCA TCGA-LT-A5Z6-01A 3 10 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 16668 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-LAPTM5 PUM1 chr1 31501643 - LAPTM5 chr1 31215396 - Exonic hg19 BLCA TCGA-CU-A0YN-01A 26 208 In-Frame Intra-chr p35.2 p35.2 Seq+ 16669 ChimerSeq STARFusion TCGA_RNA-Seq LMBR1L-KCNK6 LMBR1L chr12 49504267 - KCNK6 chr19 38817233 + Exonic hg19 BLCA TCGA-CU-A0YN-01A 18 72 Out-of-frame Inter-chr q13.12 q13.2 Seq+ 16670 ChimerSeq STARFusion TCGA_RNA-Seq LMBR1L-KCNK6 LMBR1L chr12 49500744 - KCNK6 chr19 38817233 + Exonic hg19 BLCA TCGA-CU-A0YN-01A 15 72 In-Frame Inter-chr q13.12 q13.2 Seq+ 16671 ChimerSeq STARFusion TCGA_RNA-Seq LMBR1L-KCNK6 LMBR1L chr12 49499707 - KCNK6 chr19 38817233 + Exonic hg19 BLCA TCGA-CU-A0YN-01A 4 72 Out-of-frame Inter-chr q13.12 q13.2 Seq+ 16672 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57728677 + VMP1 chr17 57915656 + Exonic hg19 BLCA TCGA-CU-A0YN-01A 7 56 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 16673 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57697534 + VMP1 chr17 57895073 + Exonic hg19 BLCA TCGA-CU-A0YN-01A 6 56 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 16674 ChimerSeq STARFusion TCGA_RNA-Seq SLC2A13-FAM120A SLC2A13 chr12 40422103 - FAM120A chr9 96323391 + Exonic hg19 BLCA TCGA-CU-A0YN-01A 4 2 In-Frame Inter-chr q12 q22.31 Seq+ 16675 ChimerSeq STARFusion TCGA_RNA-Seq ZNF606-RDH13 ZNF606 chr19 58499575 - RDH13 chr19 55575780 - Exonic hg19 BLCA TCGA-CU-A0YN-01A 2 10 CDS-5'UTR Intra-chr q13.43 Transcription factor Seq+ 16676 ChimerSeq STARFusion TCGA_RNA-Seq MTAP-FLJ35282 MTAP chr9 21859424 + FLJ35282 chr9 22820737 + Exonic hg19 BLCA TCGA-HQ-A5ND-01A 2 22 CDS-5'UTR Intra-chr p21.3 Tumor suppressor gene Seq+ 16677 ChimerSeq STARFusion TCGA_RNA-Seq NCOA7-HINT3 NCOA7 chr6 126112213 + HINT3 chr6 126288033 + Exonic hg19 BLCA TCGA-HQ-A5ND-01A 2 21 5'UTR-CDS Intra-chr q22.31 q22.32 Seq+ 16678 ChimerSeq STARFusion TCGA_RNA-Seq NCOA7-HINT3 NCOA7 chr6 126107359 + HINT3 chr6 126288033 + Exonic hg19 BLCA TCGA-HQ-A5ND-01A 2 21 5'UTR-CDS Intra-chr q22.31 q22.32 Seq+ 16679 ChimerSeq STARFusion TCGA_RNA-Seq CANX-RUFY1 CANX chr5 179136060 + RUFY1 chr5 179020479 + Exonic hg19 BLCA TCGA-2F-A9KO-01A 12 26 In-Frame Intra-chr 16680 ChimerSeq STARFusion TCGA_RNA-Seq FAM179B-KCNK13 FAM179B chr14 45523752 + KCNK13 chr14 90650455 + Exonic hg19 BLCA TCGA-2F-A9KO-01A 7 7 Out-of-frame Intra-chr q32.11 Seq+ 16681 ChimerSeq STARFusion TCGA_RNA-Seq FHOD3-ELP2 FHOD3 chr18 34092506 + ELP2 chr18 33738798 + Exonic hg19 BLCA TCGA-2F-A9KO-01A 4 1 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 16682 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80950355 - MRPS28 chr8 80831383 - Exonic hg19 BLCA TCGA-2F-A9KO-01A 3 2 Out-of-frame Intra-chr q21.13 q21.13 16683 ChimerSeq STARFusion TCGA_RNA-Seq RNF41-MSRB3 RNF41 chr12 56607742 - MSRB3 chr12 65702309 + Exonic hg19 BLCA TCGA-UY-A78L-01A 3 5 5'UTR-5'UTR Intra-chr q13.3 q14.3 Seq+ 16684 ChimerSeq STARFusion TCGA_RNA-Seq RCBTB2-UBAC2 RCBTB2 chr13 49107164 - UBAC2 chr13 99890681 + Exonic hg19 BLCA TCGA-DK-A2I4-01A 3 1 5'UTR-5'UTR Intra-chr q14.2 q32.3 16685 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57915656 + Exonic hg19 BLCA TCGA-DK-A2I4-01A 2 1 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 16686 ChimerSeq STARFusion TCGA_RNA-Seq DHRS2-IL25 DHRS2 chr14 24109104 + IL25 chr14 23844834 + Exonic hg19 BLCA TCGA-E7-A85H-01A 229 1015 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 16687 ChimerSeq STARFusion TCGA_RNA-Seq ADAT3-DAZAP1 ADAT3 chr19 1905438 + DAZAP1 chr19 1417499 + Exonic hg19 BLCA TCGA-E7-A85H-01A 32 14 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 16688 ChimerSeq STARFusion TCGA_RNA-Seq SCAMP4-DAZAP1 SCAMP4 chr19 1905438 + DAZAP1 chr19 1417499 + Exonic hg19 BLCA TCGA-E7-A85H-01A 32 14 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 16689 ChimerSeq STARFusion TCGA_RNA-Seq PSPC1-ACTR8 PSPC1 chr13 20304379 - ACTR8 chr3 53914136 - Exonic hg19 BLCA TCGA-E7-A85H-01A 12 25 In-Frame Inter-chr q12.11 p21.1 Seq+ 16690 ChimerSeq STARFusion TCGA_RNA-Seq TEAD1-PARVA TEAD1 chr11 12785981 + PARVA chr11 12549396 + Exonic hg19 BLCA TCGA-E7-A85H-01A 8 26 In-Frame Intra-chr p15.3 Transcription factor p15.3 Seq+ 16691 ChimerSeq STARFusion TCGA_RNA-Seq PPAP2A-SLC38A9 PPAP2A chr5 54830400 - SLC38A9 chr5 54993820 - Exonic hg19 BLCA TCGA-E7-A85H-01A 7 24 CDS-5'UTR Intra-chr q11.2 Seq+ 16692 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5P1-FAM57B SLC7A5P1 chr16 29624424 - FAM57B chr16 30037142 - Exonic hg19 BLCA TCGA-E7-A85H-01A 8 15 3'UTR-CDS Intra-chr p11.2 p11.2 16693 ChimerSeq STARFusion TCGA_RNA-Seq CNOT1-GOT2 CNOT1 chr16 58608513 - GOT2 chr16 58757806 - Exonic hg19 BLCA TCGA-E7-A85H-01A 6 16 In-Frame Intra-chr q21 q21 Seq+ 16694 ChimerSeq STARFusion TCGA_RNA-Seq RAB27A-DYX1C1 RAB27A chr15 55562363 - DYX1C1 chr15 55731779 - Exonic hg19 BLCA TCGA-E7-A85H-01A 4 13 5'UTR-CDS Intra-chr q21.3 Seq+ 16695 ChimerSeq STARFusion TCGA_RNA-Seq PPME1-YIF1A PPME1 chr11 73915490 + YIF1A chr11 66055147 - Exonic hg19 BLCA TCGA-E7-A85H-01A 5 8 In-Frame Intra-chr q13.4 q13.2 Seq+ 16696 ChimerSeq STARFusion TCGA_RNA-Seq UBE3C-FAF1 UBE3C chr7 157018233 + FAF1 chr1 51061888 - Exonic hg19 BLCA TCGA-E7-A85H-01A 2 12 Out-of-frame Inter-chr q36.3 p32.3 Seq+ 16697 ChimerSeq STARFusion TCGA_RNA-Seq DPP3-SPATA6 DPP3 chr11 66261104 + SPATA6 chr1 48918803 - Exonic hg19 BLCA TCGA-E7-A85H-01A 4 3 In-Frame Inter-chr q13.2 p33 Seq+ 16698 ChimerSeq STARFusion TCGA_RNA-Seq CEP350-TOR1AIP1 CEP350 chr1 179981210 + TOR1AIP1 chr1 179869261 + Exonic hg19 BLCA TCGA-E7-A85H-01A 2 6 In-Frame Intra-chr q25.2 q25.2 Seq+ 16699 ChimerSeq STARFusion TCGA_RNA-Seq NBN-RIPK2 NBN chr8 90976638 - RIPK2 chr8 90796278 + Exonic hg19 BLCA TCGA-E7-A85H-01A 2 3 Out-of-frame Intra-chr q21.3 Oncogene Tumor suppressor gene q21.3 TKL:RIPK Seq+ 16700 ChimerSeq STARFusion TCGA_RNA-Seq FBXW4-C10orf76 FBXW4 chr10 103454138 - C10orf76 chr10 103649247 - Exonic hg19 BLCA TCGA-E7-A85H-01A 2 1 In-Frame Intra-chr q24.32 q24.32 Seq+ 16701 ChimerSeq STARFusion TCGA_RNA-Seq GJB2-CRYL1 GJB2 chr13 20766922 - CRYL1 chr13 21063635 - Exonic hg19 BLCA TCGA-E7-A85H-01A 2 1 5'UTR-CDS Intra-chr q12.11 Tumor suppressor gene q12.11 16702 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 BLCA TCGA-E7-A85H-01A 2 0 In-Frame Intra-chr p11.21 p11.21 16703 ChimerSeq STARFusion TCGA_RNA-Seq UBR5-ODF1 UBR5 chr8 103424401 - ODF1 chr8 103572680 + Exonic hg19 BLCA TCGA-UY-A78M-01A 67 129 In-Frame Intra-chr q22.3 Oncogene q22.3 Seq+ 16704 ChimerSeq STARFusion TCGA_RNA-Seq ANXA8L2-LINC00842 ANXA8L2 chr10 47747132 + LINC00842 chr10 47099714 - Exonic hg19 BLCA TCGA-UY-A78M-01A 3 2 Out-of-frame Intra-chr 16705 ChimerSeq STARFusion TCGA_RNA-Seq PPAP2A-MCIN PPAP2A chr5 54830400 - MCIN chr5 54518851 - Exonic hg19 BLCA TCGA-UY-A78M-01A 2 2 Out-of-frame Intra-chr 16706 ChimerSeq STARFusion TCGA_RNA-Seq DHRS2-GSTM2 DHRS2 chr14 24105981 + GSTM2 chr1 110213909 + Exonic hg19 BLCA TCGA-UY-A78M-01A 2 1 5'UTR-CDS Inter-chr q11.2 p13.3 16707 ChimerSeq STARFusion TCGA_RNA-Seq RBM34-MARK3 RBM34 chr1 235324208 - MARK3 chr14 103958114 + Exonic hg19 BLCA TCGA-UY-A78M-01A 2 1 Out-of-frame Inter-chr q42.3 q32.32 CAMK:CAMKL 16708 ChimerSeq STARFusion TCGA_RNA-Seq C2CD2-APP C2CD2 chr21 43325833 - APP chr21 27372497 - Exonic hg19 BLCA TCGA-GD-A3OP-01A 4 18 In-Frame Intra-chr q22.3 q21.3 Seq+ 16709 ChimerSeq STARFusion TCGA_RNA-Seq LINC00094-RALGDS LINC00094 chr9 136891212 + RALGDS chr9 135987539 - Exonic hg19 BLCA TCGA-GD-A3OP-01A 2 8 5'UTR-CDS Intra-chr q34.2 q34.2 Oncogene 16710 ChimerSeq STARFusion TCGA_RNA-Seq EPB41-HGSNAT EPB41 chr1 29323831 + HGSNAT chr8 43013718 + Exonic hg19 BLCA TCGA-2F-A9KP-01A 51 152 In-Frame Inter-chr p35.3 Tumor suppressor gene p11.21 Seq+ 16711 ChimerSeq STARFusion TCGA_RNA-Seq SYS1-IDO2 SYS1 chr20 43994326 + IDO2 chr8 39872766 + Exonic hg19 BLCA TCGA-2F-A9KP-01A 21 109 Out-of-frame Inter-chr q13.12 p11.21 Seq+ 16712 ChimerSeq STARFusion TCGA_RNA-Seq SARNP-PAN2 SARNP chr12 56211450 - PAN2 chr12 56722425 - Exonic hg19 BLCA TCGA-2F-A9KP-01A 35 12 In-Frame Intra-chr q13.2 q13.3 Seq+ 16713 ChimerSeq STARFusion TCGA_RNA-Seq PGAP3-ERBB2 PGAP3 chr17 37840850 - ERBB2 chr17 37883942 + Exonic hg19 BLCA TCGA-2F-A9KP-01A 17 55 Out-of-frame Intra-chr q12 Oncogene q12 Oncogene Seq+ 16714 ChimerSeq STARFusion TCGA_RNA-Seq NUP188-TMEM8C NUP188 chr9 131768647 + TMEM8C chr9 136379907 - Exonic hg19 BLCA TCGA-2F-A9KP-01A 8 89 In-Frame Intra-chr q34.11 q34.2 Seq+ 16715 ChimerSeq STARFusion TCGA_RNA-Seq SYS1-IDO2 SYS1 chr20 43996258 + IDO2 chr8 39872766 + Exonic hg19 BLCA TCGA-2F-A9KP-01A 3 109 3'UTR-CDS Inter-chr q13.12 p11.21 Seq+ 16716 ChimerSeq STARFusion TCGA_RNA-Seq PHF21A-NUTF2 PHF21A chr11 46098305 - NUTF2 chr16 67902243 + Exonic hg19 BLCA TCGA-2F-A9KP-01A 21 31 In-Frame Inter-chr p11.2 Transcription factor q22.1 Seq+ 16717 ChimerSeq STARFusion TCGA_RNA-Seq NUP188-TMEM8C NUP188 chr9 131768669 + TMEM8C chr9 136379909 - Exonic hg19 BLCA TCGA-2F-A9KP-01A 6 89 Out-of-frame Intra-chr q34.11 q34.2 Seq+ 16718 ChimerSeq STARFusion TCGA_RNA-Seq IP6K1-MON1A IP6K1 chr3 49775645 - MON1A chr3 49950792 - Exonic hg19 BLCA TCGA-2F-A9KP-01A 17 42 In-Frame Intra-chr p21.31 p21.31 Seq+ 16719 ChimerSeq STARFusion TCGA_RNA-Seq ST3GAL3-ZMAT4 ST3GAL3 chr1 44202051 + ZMAT4 chr8 40389757 - Exonic hg19 BLCA TCGA-2F-A9KP-01A 11 35 Out-of-frame Inter-chr p34.1 p11.21 Transcription factor Seq+ 16720 ChimerSeq STARFusion TCGA_RNA-Seq TRMT61A-AMN TRMT61A chr14 103996646 + AMN chr14 103394763 + Exonic hg19 BLCA TCGA-2F-A9KP-01A 5 14 Out-of-frame Intra-chr q32.33 q32.32 Seq+ 16721 ChimerSeq STARFusion TCGA_RNA-Seq GBF1-UBE2R2 GBF1 chr10 104103939 + UBE2R2 chr9 33886879 + Exonic hg19 BLCA TCGA-2F-A9KP-01A 4 16 Out-of-frame Inter-chr q24.32 p13.3 Seq+ 16722 ChimerSeq STARFusion TCGA_RNA-Seq RAF1-IQSEC1 RAF1 chr3 12705312 - IQSEC1 chr3 12983365 - Exonic hg19 BLCA TCGA-2F-A9KP-01A 2 15 5'UTR-CDS Intra-chr p25.2 TKL:RAF Oncogene p25.2 Seq+ 16723 ChimerSeq STARFusion TCGA_RNA-Seq WDR59-CHST5 WDR59 chr16 74922067 - CHST5 chr16 75567081 - Exonic hg19 BLCA TCGA-2F-A9KP-01A 4 5 CDS-5'UTR Intra-chr q23.1 q23.1 Seq+ 16724 ChimerSeq STARFusion TCGA_RNA-Seq PKNOX1-PDE9A PKNOX1 chr21 44394774 + PDE9A chr21 44174100 + Exonic hg19 BLCA TCGA-2F-A9KP-01A 3 3 5'UTR-CDS Intra-chr q22.3 Tumor suppressor gene Transcription factor q22.3 Seq+ 16725 ChimerSeq STARFusion TCGA_RNA-Seq FAM108C1-PRAMEF6 FAM108C1 chr15 80988360 + PRAMEF6 chr1 13364869 + Exonic hg19 BLCA TCGA-2F-A9KP-01A 2 2 CDS-5'UTR Inter-chr Seq+ 16726 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-CENPP TMEM123 chr11 102319543 - CENPP chr9 95373596 + Exonic hg19 BLCA TCGA-E7-A7DV-01A 22 87 Out-of-frame Inter-chr q22.2 q22.31 Seq+ 16727 ChimerSeq STARFusion TCGA_RNA-Seq RFTN1-TMEM40 RFTN1 chr3 16554949 - TMEM40 chr3 12791339 - Exonic hg19 BLCA TCGA-E7-A7DV-01A 22 46 5'UTR-5'UTR Intra-chr p24.3 p25.2 Seq+ 16728 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-ANGPTL5 TMEM123 chr11 102319543 - ANGPTL5 chr11 101778732 - Exonic hg19 BLCA TCGA-E7-A7DV-01A 8 79 CDS-5'UTR Intra-chr q22.2 q22.1 Seq+ 16729 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-ANGPTL5 TMEM123 chr11 102319543 - ANGPTL5 chr11 101762329 - Exonic hg19 BLCA TCGA-E7-A7DV-01A 3 79 In-Frame Intra-chr q22.2 q22.1 Seq+ 16730 ChimerSeq STARFusion TCGA_RNA-Seq FAM49B-MRPL13 FAM49B chr8 130915558 - MRPL13 chr8 121455548 - Exonic hg19 BLCA TCGA-E7-A7DV-01A 5 24 5'UTR-CDS Intra-chr q24.21 q24.12 Seq+ 16731 ChimerSeq STARFusion TCGA_RNA-Seq FAM49B-MRPL13 FAM49B chr8 130915558 - MRPL13 chr8 121444363 - Exonic hg19 BLCA TCGA-E7-A7DV-01A 2 24 5'UTR-CDS Intra-chr q24.21 q24.12 Seq+ 16732 ChimerSeq STARFusion TCGA_RNA-Seq B9D1-ALDH16A1 B9D1 chr17 19263633 - ALDH16A1 chr19 49961743 + Exonic hg19 BLCA TCGA-E7-A7DV-01A 6 2 In-Frame Inter-chr p11.2 q13.33 Seq+ 16733 ChimerSeq STARFusion TCGA_RNA-Seq TNPO2-KLF1 TNPO2 chr19 12834063 - KLF1 chr19 12995874 - Exonic hg19 BLCA TCGA-E7-A7DV-01A 3 1 5'UTR-CDS Intra-chr p13.13 p13.13 Transcription factor 16734 ChimerSeq STARFusion TCGA_RNA-Seq LCORL-CDKAL1 LCORL chr4 18023221 - CDKAL1 chr6 20955650 + Exonic hg19 BLCA TCGA-E7-A7DV-01A 2 3 In-Frame Inter-chr p15.31 Transcription factor p22.3 Seq+ 16735 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD2-SHC3 PCMTD2 chr20 62899363 + SHC3 chr9 91727541 - Exonic hg19 BLCA TCGA-E7-A7DV-01A 2 3 Out-of-frame Inter-chr q22.1 16736 ChimerSeq STARFusion TCGA_RNA-Seq NRIP1-C21orf91 NRIP1 chr21 16437066 - C21orf91 chr21 19165898 - Exonic hg19 BLCA TCGA-E7-A7DV-01A 2 2 5'UTR-CDS Intra-chr q21.1 q21.1 Seq+ 16737 ChimerSeq STARFusion TCGA_RNA-Seq KLHDC4-ZCCHC14 KLHDC4 chr16 87788800 - ZCCHC14 chr16 87493737 - Exonic hg19 BLCA TCGA-E7-A7DV-01A 2 0 In-Frame Intra-chr q24.2 q24.2 16738 ChimerSeq STARFusion TCGA_RNA-Seq NUP62-VSTM2B NUP62 chr19 50430951 - VSTM2B chr19 30054753 + Exonic hg19 BLCA TCGA-4Z-AA7M 40 178 5'UTR-CDS Intra-chr q13.33 q12 Seq+ 16739 ChimerSeq STARFusion TCGA_RNA-Seq IL4I1-VSTM2B IL4I1 chr19 50430951 - VSTM2B chr19 30054753 + Exonic hg19 BLCA TCGA-4Z-AA7M 40 174 5'UTR-CDS Intra-chr q13.33 q12 Seq+ 16740 ChimerSeq STARFusion TCGA_RNA-Seq NUP62-VSTM2B NUP62 chr19 50432583 - VSTM2B chr19 30054753 + Exonic hg19 BLCA TCGA-4Z-AA7M 10 178 5'UTR-CDS Intra-chr q13.33 q12 Seq+ 16741 ChimerSeq STARFusion TCGA_RNA-Seq IL4I1-VSTM2B IL4I1 chr19 50432583 - VSTM2B chr19 30054753 + Exonic hg19 BLCA TCGA-4Z-AA7M 10 174 5'UTR-CDS Intra-chr q13.33 q12 Seq+ 16742 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-ADSS SLC39A11 chr17 71080947 - ADSS chr1 244601070 - Exonic hg19 BLCA TCGA-4Z-AA7M 5 19 CDS-5'UTR Inter-chr q25.1 q44 Seq+ 16743 ChimerSeq STARFusion TCGA_RNA-Seq TRIM37-ZNF385D TRIM37 chr17 57139928 - ZNF385D chr3 22210527 - Exonic hg19 BLCA TCGA-4Z-AA7M 5 3 CDS-5'UTR Inter-chr q22 p24.3 Transcription factor Seq+ 16744 ChimerSeq STARFusion TCGA_RNA-Seq PSME4-ASB3 PSME4 chr2 54197680 - ASB3 chr2 53992722 - Exonic hg19 BLCA TCGA-4Z-AA7M 3 8 CDS-5'UTR Intra-chr p16.2 p16.2 16745 ChimerSeq STARFusion TCGA_RNA-Seq LAPTM4B-MATN2 LAPTM4B chr8 98788336 + MATN2 chr8 98943181 + Exonic hg19 BLCA TCGA-4Z-AA7M 2 6 Out-of-frame Intra-chr q22.1 q22.1 16746 ChimerSeq STARFusion TCGA_RNA-Seq PIGS-SPAG5 PIGS chr17 26883184 - SPAG5 chr17 26905310 - Exonic hg19 BLCA TCGA-4Z-AA7M 2 3 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 16747 ChimerSeq STARFusion TCGA_RNA-Seq KPNA3-FGF2 KPNA3 chr13 50321085 - FGF2 chr4 123797476 + Exonic hg19 BLCA TCGA-E5-A2PC-01A 40 161 Out-of-frame Inter-chr q14.2 q28.1 Seq+ 16748 ChimerSeq STARFusion TCGA_RNA-Seq NCOR1-CDRT4 NCOR1 chr17 15989596 - CDRT4 chr17 15343599 - Exonic hg19 BLCA TCGA-E5-A2PC-01A 4 33 CDS-5'UTR Intra-chr p11.2 Oncogene p12 Seq+ 16749 ChimerSeq STARFusion TCGA_RNA-Seq NCOR1-CDRT4 NCOR1 chr17 15989596 - CDRT4 chr17 15341517 - Exonic hg19 BLCA TCGA-E5-A2PC-01A 3 33 Out-of-frame Intra-chr p11.2 Oncogene p12 Seq+ 16750 ChimerSeq STARFusion TCGA_RNA-Seq LIN54-SCD5 LIN54 chr4 83933945 - SCD5 chr4 83626566 - Exonic hg19 BLCA TCGA-E5-A2PC-01A 2 18 5'UTR-CDS Intra-chr q21.22 Transcription factor q21.22 16751 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-NUP107 MDM2 chr12 69214154 + NUP107 chr12 69109407 + Exonic hg19 BLCA TCGA-G2-A2EK-01A 2 3 Out-of-frame Intra-chr q15 Oncogene q15 Seq+ 16752 ChimerSeq STARFusion TCGA_RNA-Seq SGSM2-EPN2 SGSM2 chr17 2246914 + EPN2 chr17 19213198 + Exonic hg19 BLCA TCGA-FD-A3SQ-01A 22 69 In-Frame Intra-chr p13.3 Transcription factor p11.2 Seq+ 16753 ChimerSeq STARFusion TCGA_RNA-Seq RPL8-COL1A1 RPL8 chr8 146015278 - COL1A1 chr17 48261577 - Exonic hg19 BLCA TCGA-FD-A3SQ-01A 3 11 Out-of-frame Inter-chr q24.3 q21.33 Oncogene 16754 ChimerSeq STARFusion TCGA_RNA-Seq ZNF638-C2orf78 ZNF638 chr2 71558995 + C2orf78 chr2 74040604 + Exonic hg19 BLCA TCGA-FD-A3SM-01A 5 20 5'UTR-CDS Intra-chr p13.3 p13.1 Seq+ 16755 ChimerSeq STARFusion TCGA_RNA-Seq ZNF638-C2orf78 ZNF638 chr2 71559005 + C2orf78 chr2 74040604 + Exonic hg19 BLCA TCGA-FD-A3SM-01A 2 20 5'UTR-CDS Intra-chr p13.3 p13.1 Seq+ 16756 ChimerSeq STARFusion TCGA_RNA-Seq RAB11FIP1-GPR124 RAB11FIP1 chr8 37734627 - GPR124 chr8 37686406 + Exonic hg19 BLCA TCGA-FD-A3SM-01A 2 16 Out-of-frame Intra-chr p11.23 16757 ChimerSeq STARFusion TCGA_RNA-Seq IPO7-ZNF143 IPO7 chr11 9406394 + ZNF143 chr11 9549077 + Exonic hg19 BLCA TCGA-ZF-AA56 36 62 In-Frame Intra-chr p15.4 p15.4 Transcription factor Seq+ 16758 ChimerSeq STARFusion TCGA_RNA-Seq PALLD-TMEM53 PALLD chr4 169753322 + TMEM53 chr1 45125967 - Exonic hg19 BLCA TCGA-ZF-AA58 9 39 5'UTR-CDS Inter-chr q32.3 p34.1 Seq+ 16759 ChimerSeq STARFusion TCGA_RNA-Seq ABHD16A-VARS ABHD16A chr6 31668719 - VARS chr6 31763027 - Exonic hg19 BLCA TCGA-ZF-AA58 2 4 CDS-5'UTR Intra-chr Seq+ 16760 ChimerSeq STARFusion TCGA_RNA-Seq COX14-CERS5 COX14 chr12 50506084 + CERS5 chr12 50528485 - Exonic hg19 BLCA TCGA-BT-A2LD-01A 4 13 5'UTR-CDS Intra-chr q13.12 q13.12 16761 ChimerSeq STARFusion TCGA_RNA-Seq COX14-CERS5 COX14 chr12 50506084 + CERS5 chr12 50524477 - Exonic hg19 BLCA TCGA-BT-A2LD-01A 3 13 5'UTR-CDS Intra-chr q13.12 q13.12 16762 ChimerSeq STARFusion TCGA_RNA-Seq RBM39-PRDM5 RBM39 chr20 34329863 - PRDM5 chr4 121742500 - Exonic hg19 BLCA TCGA-BT-A2LD-01A 4 5 5'UTR-CDS Inter-chr q11.22 q27 Tumor suppressor gene Transcription factor Seq+ 16763 ChimerSeq STARFusion TCGA_RNA-Seq COX6C-TDRD12 COX6C chr8 100904136 - TDRD12 chr19 33281437 + Exonic hg19 BLCA TCGA-BT-A2LD-01A 2 8 Out-of-frame Inter-chr q22.2 q13.11 Seq+ 16764 ChimerSeq STARFusion TCGA_RNA-Seq URI1-ZNF536 URI1 chr19 30462134 + ZNF536 chr19 31038850 + Exonic hg19 BLCA TCGA-BT-A2LD-01A 2 8 Out-of-frame Intra-chr q12 q12 Transcription factor 16765 ChimerSeq STARFusion TCGA_RNA-Seq PTDSS1-NIPAL2 PTDSS1 chr8 97299374 + NIPAL2 chr8 99266315 - Exonic hg19 BLCA TCGA-BT-A2LD-01A 2 1 In-Frame Intra-chr q22.1 q22.2 Seq+ 16766 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-GATAD2B RCC1 chr1 28834672 + GATAD2B chr1 153800824 - Exonic hg19 BLCA TCGA-BT-A2LD-01A 2 0 5'UTR-5'UTR Intra-chr p35.3 Transcription factor 16767 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-GATAD2B SNHG3 chr1 28834672 + GATAD2B chr1 153800824 - Exonic hg19 BLCA TCGA-BT-A2LD-01A 2 0 5'UTR-5'UTR Intra-chr p35.3 Transcription factor 16768 ChimerSeq STARFusion TCGA_RNA-Seq RALA-CAMK2B RALA chr7 39663424 + CAMK2B chr7 44260500 - Exonic hg19 BLCA TCGA-ZF-AA5H 27 98 5'UTR-5'UTR Intra-chr p14.1 p13 Seq+ 16769 ChimerSeq STARFusion TCGA_RNA-Seq RALA-CAMK2B RALA chr7 39664026 + CAMK2B chr7 44260500 - Exonic hg19 BLCA TCGA-ZF-AA5H 10 98 5'UTR-5'UTR Intra-chr p14.1 p13 Seq+ 16770 ChimerSeq STARFusion TCGA_RNA-Seq CDK13-DDX56 CDK13 chr7 40041630 + DDX56 chr7 44609727 - Exonic hg19 BLCA TCGA-ZF-AA5H 12 27 Out-of-frame Intra-chr p14.1 p13 Seq+ 16771 ChimerSeq STARFusion TCGA_RNA-Seq SMIM7-CACNA1A SMIM7 chr19 16770206 - CACNA1A chr19 13366073 - Exonic hg19 BLCA TCGA-ZF-AA5H 7 11 Out-of-frame Intra-chr p13.11 p13.13 Seq+ 16772 ChimerSeq STARFusion TCGA_RNA-Seq CBX3-CDK14 CBX3 chr7 26251376 + CDK14 chr7 90836480 + Exonic hg19 BLCA TCGA-ZF-AA5H 2 23 CDS-3'UTR Intra-chr p15.2 q21.13 Seq+ 16773 ChimerSeq STARFusion TCGA_RNA-Seq COG5-FOXP1 COG5 chr7 107188556 - FOXP1 chr3 71542706 - Exonic hg19 BLCA TCGA-ZF-AA5H 3 1 CDS-5'UTR Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 16774 ChimerSeq STARFusion TCGA_RNA-Seq CTNNB1-LOC100506136 CTNNB1 chr3 41280845 + LOC100506136 chr7 96275244 - Exonic hg19 BLCA TCGA-BT-A20N-01A 5 52 3'UTR-3'UTR Inter-chr p22.1 Oncogene 16775 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-YAP1 PPP6R3 chr11 68326147 + YAP1 chr11 102098200 + Exonic hg19 BLCA TCGA-BT-A20N-01A 6 45 In-Frame Intra-chr q13.2 q22.1 Tumor suppressor gene Seq+ 16776 ChimerSeq STARFusion TCGA_RNA-Seq CTNNB1-LOC100506136 CTNNB1 chr3 41280845 + LOC100506136 chr7 96251955 - Exonic hg19 BLCA TCGA-BT-A20N-01A 4 52 3'UTR-3'UTR Inter-chr p22.1 Oncogene 16777 ChimerSeq STARFusion TCGA_RNA-Seq FBXL4-BTN3A3 FBXL4 chr6 99374353 - BTN3A3 chr6 26444185 + Exonic hg19 BLCA TCGA-BT-A20N-01A 4 6 Out-of-frame Intra-chr q16.2 p22.2 Seq+ 16778 ChimerSeq STARFusion TCGA_RNA-Seq DCAF8-FCRLA DCAF8 chr1 160231075 - FCRLA chr1 161682875 + Exonic hg19 BLCA TCGA-ZF-AA5P 3 6 5'UTR-CDS Intra-chr q23.2 q23.3 Seq+ 16779 ChimerSeq STARFusion TCGA_RNA-Seq ARID4B-MARK1 ARID4B chr1 235311719 - MARK1 chr1 220752696 + Exonic hg19 BLCA TCGA-ZF-AA5P 4 0 3'UTR-CDS Intra-chr q42.3 q41 CAMK:CAMKL Oncogene 16780 ChimerSeq STARFusion TCGA_RNA-Seq RBM34-MARK1 RBM34 chr1 235311719 - MARK1 chr1 220752696 + Exonic hg19 BLCA TCGA-ZF-AA5P 4 0 Out-of-frame Intra-chr q42.3 q41 CAMK:CAMKL Oncogene Seq+ 16781 ChimerSeq STARFusion TCGA_RNA-Seq NRIP1-DECR1 NRIP1 chr21 16386665 - DECR1 chr8 91054956 + Exonic hg19 BLCA TCGA-ZF-AA5P 2 2 5'UTR-CDS Inter-chr q21.1 q21.3 Seq+ 16782 ChimerSeq STARFusion TCGA_RNA-Seq CDKN2A-CAPZB CDKN2A chr9 21974677 - CAPZB chr1 19671746 - Exonic hg19 BLCA TCGA-E7-A6MD-01A 100 338 In-Frame Inter-chr p21.3 Oncogene Tumor suppressor gene p36.13 Seq+ 16783 ChimerSeq STARFusion TCGA_RNA-Seq AFF1-PTPN13 AFF1 chr4 88046295 + PTPN13 chr4 87720254 + Exonic hg19 BLCA TCGA-E7-A6MD-01A 4 30 In-Frame Intra-chr q21.3 Oncogene q21.3 Tumor suppressor gene Seq+ 16784 ChimerSeq STARFusion TCGA_RNA-Seq BOLA2-LOC440354 BOLA2 chr16 30204679 - LOC440354 chr16 30297589 - Exonic hg19 BLCA TCGA-E7-A6MD-01A 2 8 CDS-3'UTR Intra-chr p11.2 16785 ChimerSeq STARFusion TCGA_RNA-Seq BOLA2B-LOC440354 BOLA2B chr16 30204679 - LOC440354 chr16 30297589 - Exonic hg19 BLCA TCGA-E7-A6MD-01A 2 8 CDS-3'UTR Intra-chr p11.2 16786 ChimerSeq STARFusion TCGA_RNA-Seq BOLA2-LOC595101 BOLA2 chr16 30204679 - LOC595101 chr16 30297589 - Exonic hg19 BLCA TCGA-E7-A6MD-01A 2 4 CDS-3'UTR Intra-chr p11.2 16787 ChimerSeq STARFusion TCGA_RNA-Seq BOLA2B-LOC595101 BOLA2B chr16 30204679 - LOC595101 chr16 30297589 - Exonic hg19 BLCA TCGA-E7-A6MD-01A 2 4 CDS-3'UTR Intra-chr p11.2 16788 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-ABR YWHAE chr17 1303341 - ABR chr17 1028702 - Exonic hg19 BLCA TCGA-G2-A2EJ-01A 20 43 In-Frame Intra-chr p13.3 p13.3 Seq+ 16789 ChimerSeq STARFusion TCGA_RNA-Seq AVL9-BBS9 AVL9 chr7 32535414 + BBS9 chr7 33376053 + Exonic hg19 BLCA TCGA-G2-A2EJ-01A 8 46 Out-of-frame Intra-chr p14.3 p14.3 Seq+ 16790 ChimerSeq STARFusion TCGA_RNA-Seq FZD6-DPYS FZD6 chr8 104312512 + DPYS chr8 105405219 - Exonic hg19 BLCA TCGA-LC-A66R-01A 21 48 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 16791 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-RPH3AL YWHAE chr17 1303341 - RPH3AL chr17 177370 - Exonic hg19 BLCA TCGA-LC-A66R-01A 5 35 CDS-5'UTR Intra-chr p13.3 Seq+ 16792 ChimerSeq STARFusion TCGA_RNA-Seq RSU1-BAALC RSU1 chr10 16858972 - BAALC chr8 104225147 + Exonic hg19 BLCA TCGA-LC-A66R-01A 4 30 In-Frame Inter-chr p13 q22.3 Seq+ 16793 ChimerSeq STARFusion TCGA_RNA-Seq LRRC58-GSK3B LRRC58 chr3 120053709 - GSK3B chr3 119721086 - Exonic hg19 BLCA TCGA-LC-A66R-01A 4 2 In-Frame Intra-chr q13.33 q13.33 CMGC:GSK Tumor suppressor gene 16794 ChimerSeq STARFusion TCGA_RNA-Seq VCL-ADK VCL chr10 75865111 + ADK chr10 76153899 + Exonic hg19 BLCA TCGA-LC-A66R-01A 3 6 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 16795 ChimerSeq STARFusion TCGA_RNA-Seq TAOK3-VSIG10 TAOK3 chr12 118636856 - VSIG10 chr12 118504499 - Exonic hg19 BLCA TCGA-LC-A66R-01A 2 4 Out-of-frame Intra-chr q24.23 q24.23 Seq+ 16796 ChimerSeq STARFusion TCGA_RNA-Seq EEA1-UBE2N EEA1 chr12 93322819 - UBE2N chr12 93805075 - Exonic hg19 BLCA TCGA-CF-A3MI-01A 2 1 In-Frame Intra-chr q22 Transcription factor q22 Seq+ 16797 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1737-C14orf166B KIAA1737 chr14 77564704 + C14orf166B chr14 77332311 + Exonic hg19 BLCA TCGA-CF-A7I0-01A 5 17 5'UTR-CDS Intra-chr Seq+ 16798 ChimerSeq STARFusion TCGA_RNA-Seq SCYL2-UTP20 SCYL2 chr12 100691953 + UTP20 chr12 101750704 + Exonic hg19 BLCA TCGA-CF-A7I0-01A 3 2 Out-of-frame Intra-chr q23.1 Other:SCY1 q23.2 Seq+ 16799 ChimerSeq STARFusion TCGA_RNA-Seq YES1-SCFD2 YES1 chr18 812115 - SCFD2 chr4 53787037 - Exonic hg19 BLCA TCGA-GU-A42P-01A 10 74 5'UTR-CDS Inter-chr p11.32 q12 Seq+ 16800 ChimerSeq STARFusion TCGA_RNA-Seq DSCR3-TTC3 DSCR3 chr21 38639539 - TTC3 chr21 38480692 + Exonic hg19 BLCA TCGA-GU-A42P-01A 2 3 Out-of-frame Intra-chr q22.13 q22.13 Seq+ 16801 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-TRAP1 CREBBP chr16 3841982 - TRAP1 chr16 3740986 - Exonic hg19 BLCA TCGA-GV-A3QI-01A 27 118 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 16802 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-MED24 WIPF2 chr17 38375744 + MED24 chr17 38209910 - Exonic hg19 BLCA TCGA-GV-A3QI-01A 3 64 5'UTR-5'UTR Intra-chr q21.2 q21.1 Seq+ 16803 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-MED24 WIPF2 chr17 38375744 + MED24 chr17 38209888 - Exonic hg19 BLCA TCGA-GV-A3QI-01A 2 64 5'UTR-5'UTR Intra-chr q21.2 q21.1 Seq+ 16804 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF12-GRIK4 ARHGEF12 chr11 120302620 + GRIK4 chr11 120673402 + Exonic hg19 BLCA TCGA-GV-A3QI-01A 11 26 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Seq+ 16805 ChimerSeq STARFusion TCGA_RNA-Seq DOCK9-SLC15A1 DOCK9 chr13 99738477 - SLC15A1 chr13 99362165 - Exonic hg19 BLCA TCGA-GV-A3QI-01A 9 26 In-Frame Intra-chr q32.3 q32.3 Seq+ 16806 ChimerSeq STARFusion TCGA_RNA-Seq COMMD1-FARS2 COMMD1 chr2 62228117 + FARS2 chr6 5771524 + Exonic hg19 BLCA TCGA-GV-A3QI-01A 6 36 Out-of-frame Inter-chr p15 p25.1 Seq+ 16807 ChimerSeq STARFusion TCGA_RNA-Seq RORA-ANXA2 RORA chr15 60823965 - ANXA2 chr15 60656722 - Exonic hg19 BLCA TCGA-GV-A3QI-01A 3 46 Out-of-frame Intra-chr q22.2 Transcription factor q22.2 Seq+ 16808 ChimerSeq STARFusion TCGA_RNA-Seq TMEM248-TYW1 TMEM248 chr7 66386448 + TYW1 chr7 66548417 + Exonic hg19 BLCA TCGA-GV-A3QI-01A 11 1 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 16809 ChimerSeq STARFusion TCGA_RNA-Seq NPRL3-KIFC2 NPRL3 chr16 173432 - KIFC2 chr8 145697593 + Exonic hg19 BLCA TCGA-GV-A3QI-01A 3 29 Out-of-frame Inter-chr p13.3 q24.3 Seq+ 16810 ChimerSeq STARFusion TCGA_RNA-Seq ENOX2-LOC286467 ENOX2 chrX 129822837 - LOC286467 chrX 130843584 - Exonic hg19 BLCA TCGA-GV-A3QI-01A 5 10 CDS-3'UTR Intra-chr q26.1 16811 ChimerSeq STARFusion TCGA_RNA-Seq CFLAR-NEDD8 CFLAR chr2 202028807 + NEDD8 chr14 24686429 - Exonic hg19 BLCA TCGA-GV-A3QI-01A 5 1 3'UTR-CDS Inter-chr q33.1 q12 16812 ChimerSeq STARFusion TCGA_RNA-Seq AKAP8-BRD4 AKAP8 chr19 15465385 - BRD4 chr19 15359824 - Exonic hg19 BLCA TCGA-GV-A3QI-01A 3 2 Out-of-frame Intra-chr p13.12 Transcription factor p13.12 Atypical:BRD 16813 ChimerSeq STARFusion TCGA_RNA-Seq TLK2-IRAK3 TLK2 chr17 60679541 + IRAK3 chr12 66620503 + Exonic hg19 BLCA TCGA-FD-A6TG-01A 21 33 In-Frame Inter-chr q23.2 Other:TLK q14.3 TKL:IRAK Seq+ 16814 ChimerSeq STARFusion TCGA_RNA-Seq SPINT2-GRIP1 SPINT2 chr19 38781215 + GRIP1 chr12 66935730 - Exonic hg19 BLCA TCGA-FD-A6TG-01A 6 62 In-Frame Inter-chr q13.2 Tumor suppressor gene q14.3 Seq+ 16815 ChimerSeq STARFusion TCGA_RNA-Seq ZNHIT3-WDR60 ZNHIT3 chr17 34842810 + WDR60 chr7 158715068 + Exonic hg19 BLCA TCGA-FD-A6TG-01A 8 46 In-Frame Inter-chr q12 q36.3 Seq+ 16816 ChimerSeq STARFusion TCGA_RNA-Seq DLG1-MYO9B DLG1 chr3 196921296 - MYO9B chr19 17301906 + Exonic hg19 BLCA TCGA-FD-A6TG-01A 7 25 In-Frame Inter-chr q29 Tumor suppressor gene p13.11 Seq+ 16817 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL9-AGBL4 OSBPL9 chr1 52117713 + AGBL4 chr1 49056657 - Exonic hg19 BLCA TCGA-FD-A6TG-01A 5 21 In-Frame Intra-chr p32.3 p33 Seq+ 16818 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD28-GRM7 ANKRD28 chr3 15900884 - GRM7 chr3 7782044 + Exonic hg19 BLCA TCGA-FD-A6TG-01A 5 18 Out-of-frame Intra-chr p25.1 p26.1 Seq+ 16819 ChimerSeq STARFusion TCGA_RNA-Seq PPAP2A-SLC38A9 PPAP2A chr5 54830400 - SLC38A9 chr5 54993820 - Exonic hg19 BLCA TCGA-FD-A6TG-01A 8 6 CDS-5'UTR Intra-chr q11.2 Seq+ 16820 ChimerSeq STARFusion TCGA_RNA-Seq ZNF148-RPRD2 ZNF148 chr3 125050002 - RPRD2 chr1 150429764 + Exonic hg19 BLCA TCGA-FD-A6TG-01A 6 14 5'UTR-CDS Inter-chr q21.2 Transcription factor q21.2 Seq+ 16821 ChimerSeq STARFusion TCGA_RNA-Seq GFOD1-LINC00240 GFOD1 chr6 13486870 - LINC00240 chr6 26991033 + Exonic hg19 BLCA TCGA-FD-A6TG-01A 3 13 CDS-5'UTR Intra-chr p23 p22.2 16822 ChimerSeq STARFusion TCGA_RNA-Seq OPHN1-LOC440704 OPHN1 chrX 67652709 - LOC440704 chr1 190768931 + Exonic hg19 BLCA TCGA-FD-A6TG-01A 3 5 CDS-5'UTR Inter-chr q12 16823 ChimerSeq STARFusion TCGA_RNA-Seq FKRP-XPOT FKRP chr19 47251345 + XPOT chr12 64810478 + Exonic hg19 BLCA TCGA-FD-A6TG-01A 2 3 5'UTR-CDS Inter-chr q13.32 q14.2 Seq+ 16824 ChimerSeq STARFusion TCGA_RNA-Seq SNX13-GLCCI1 SNX13 chr7 17979907 - GLCCI1 chr7 8043538 + Exonic hg19 BLCA TCGA-FD-A6TG-01A 2 3 Out-of-frame Intra-chr p21.1 p21.3 Seq+ 16825 ChimerSeq STARFusion TCGA_RNA-Seq DENR-KNTC1 DENR chr12 123252151 + KNTC1 chr12 123087116 + Exonic hg19 BLCA TCGA-FD-A6TG-01A 2 2 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 16826 ChimerSeq STARFusion TCGA_RNA-Seq RBM10-SERINC2 RBM10 chrX 47006897 + SERINC2 chr1 31905814 + Exonic hg19 BLCA TCGA-FD-A6TG-01A 2 1 In-Frame Inter-chr p11.3 p35.2 16827 ChimerSeq STARFusion TCGA_RNA-Seq TCN1-MS4A4A TCN1 chr11 59622125 - MS4A4A chr11 60059698 + Exonic hg19 BLCA TCGA-S5-AA26-01A 3 14 In-Frame Intra-chr q12.1 q12.2 Seq+ 16828 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-PLXDC1 GRB7 chr17 37900460 + PLXDC1 chr17 37224212 - Exonic hg19 BLCA TCGA-CU-A0YR-01A 3 10 In-Frame Intra-chr q12 q12 Seq+ 16829 ChimerSeq STARFusion TCGA_RNA-Seq UBE2W-STAU2 UBE2W chr8 74791043 - STAU2 chr8 74652103 - Exonic hg19 BLCA TCGA-CU-A0YR-01A 3 2 CDS-5'UTR Intra-chr q21.11 q21.11 Seq+ 16830 ChimerSeq STARFusion TCGA_RNA-Seq ZNF280D-STK3 ZNF280D chr15 57025656 - STK3 chr8 99719539 - Exonic hg19 BLCA TCGA-CU-A0YR-01A 2 1 5'UTR-CDS Inter-chr q21.3 Transcription factor q22.2 Seq+ 16831 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-ETV7 KCTD20 chr6 36410888 + ETV7 chr6 36322464 - Exonic hg19 BLCA TCGA-DK-A3WY-01A 7 24 5'UTR-CDS Intra-chr p21.31 p21.31 Transcription factor Seq+ 16832 ChimerSeq STARFusion TCGA_RNA-Seq PHLDB2-KCNAB1 PHLDB2 chr3 111578423 + KCNAB1 chr3 156139405 + Exonic hg19 BLCA TCGA-DK-A3WY-01A 2 4 5'UTR-CDS Intra-chr q13.2 q25.31 Seq+ 16833 ChimerSeq STARFusion TCGA_RNA-Seq PHIP-DNAJB6 PHIP chr6 79787165 - DNAJB6 chr7 157208710 + Exonic hg19 BLCA TCGA-DK-A3WY-01A 2 1 Out-of-frame Inter-chr q14.1 q36.3 16834 ChimerSeq STARFusion TCGA_RNA-Seq ARL8B-ITPR1 ARL8B chr3 5164273 + ITPR1 chr3 4808214 + Exonic hg19 BLCA TCGA-K4-A83P-01A 5 23 In-Frame Intra-chr p26.1 p26.1 Seq+ 16835 ChimerSeq STARFusion TCGA_RNA-Seq MAP2K5-C15orf61 MAP2K5 chr15 67893087 + C15orf61 chr15 67818756 + Exonic hg19 BLCA TCGA-K4-A83P-01A 3 17 Out-of-frame Intra-chr q23 STE:STE7 q23 Seq+ 16836 ChimerSeq STARFusion TCGA_RNA-Seq JARID2-GMPR JARID2 chr6 15410596 + GMPR chr6 16274646 + Exonic hg19 BLCA TCGA-K4-A83P-01A 4 9 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 16837 ChimerSeq STARFusion TCGA_RNA-Seq SBF1-FBLN1 SBF1 chr22 50892941 - FBLN1 chr22 45938035 + Exonic hg19 BLCA TCGA-K4-A83P-01A 4 5 Out-of-frame Intra-chr q13.33 q13.31 Tumor suppressor gene Seq+ 16838 ChimerSeq STARFusion TCGA_RNA-Seq RB1-LINC00539 RB1 chr13 48955579 + LINC00539 chr13 21877959 - Exonic hg19 BLCA TCGA-ZF-AA52 2 5 Out-of-frame Intra-chr q14.2 Oncogene Tumor suppressor gene q12.11 16839 ChimerSeq STARFusion TCGA_RNA-Seq STK24-TMTC4 STK24 chr13 99228999 - TMTC4 chr13 101258681 - Exonic hg19 BLCA TCGA-BT-A2LA-01A 11 33 In-Frame Intra-chr q32.2 q32.3 Seq+ 16840 ChimerSeq STARFusion TCGA_RNA-Seq EGLN2-CYP2B7P1 EGLN2 chr19 41307320 + CYP2B7P1 chr19 41442002 + Exonic hg19 BLCA TCGA-BT-A2LA-01A 6 27 CDS-5'UTR Intra-chr q13.2 16841 ChimerSeq STARFusion TCGA_RNA-Seq EGLN2-CYP2B7P1 EGLN2 chr19 41307320 + CYP2B7P1 chr19 41442297 + Exonic hg19 BLCA TCGA-BT-A2LA-01A 2 27 CDS-5'UTR Intra-chr q13.2 16842 ChimerSeq STARFusion TCGA_RNA-Seq FAM13C-ZNF365 FAM13C chr10 61011335 - ZNF365 chr10 64382863 + Exonic hg19 BLCA TCGA-BT-A2LA-01A 3 8 Out-of-frame Intra-chr q21.1 q21.2 Transcription factor Seq+ 16843 ChimerSeq STARFusion TCGA_RNA-Seq EEF1DP3-LOC100507412 EEF1DP3 chr13 32520318 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BLCA TCGA-BT-A2LA-01A 4 3 5'UTR-5'UTR Inter-chr q13.1 16844 ChimerSeq STARFusion TCGA_RNA-Seq FECH-NCMAP FECH chr18 55247305 - NCMAP chr1 24921915 + Exonic hg19 BLCA TCGA-BT-A2LA-01A 2 5 Out-of-frame Inter-chr q21.31 p36.11 Seq+ 16845 ChimerSeq STARFusion TCGA_RNA-Seq DSCR4-KCNJ6 DSCR4 chr21 39492401 - KCNJ6 chr21 39213011 - Exonic hg19 BLCA TCGA-BT-A2LA-01A 2 3 CDS-5'UTR Intra-chr q22.13 q22.13 16846 ChimerSeq STARFusion TCGA_RNA-Seq GATS-PILRB GATS chr7 99820220 - PILRB chr7 99952766 + Exonic hg19 BLCA TCGA-BT-A2LA-01A 2 1 3'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 16847 ChimerSeq STARFusion TCGA_RNA-Seq PTPN6-LEPREL2 PTPN6 chr12 7066948 + LEPREL2 chr12 6948164 + Exonic hg19 BLCA TCGA-FD-A3NA-01A 4 33 In-Frame Intra-chr p13.31 Tumor suppressor gene Seq+ 16848 ChimerSeq STARFusion TCGA_RNA-Seq SCCPDH-CNST SCCPDH chr1 246907427 + CNST chr1 246810441 + Exonic hg19 BLCA TCGA-FD-A3NA-01A 6 20 Out-of-frame Intra-chr q44 q44 Seq+ 16849 ChimerSeq STARFusion TCGA_RNA-Seq KAT2A-STAT5B KAT2A chr17 40269053 - STAT5B chr17 40354826 - Exonic hg19 BLCA TCGA-FD-A3NA-01A 2 10 Out-of-frame Intra-chr q21.2 q21.2 Transcription factor Seq+ 16850 ChimerSeq STARFusion TCGA_RNA-Seq BCAR3-EVI5 BCAR3 chr1 94037227 - EVI5 chr1 93202184 - Exonic hg19 BLCA TCGA-FD-A3NA-01A 3 5 In-Frame Intra-chr p22.1 p22.1 Seq+ 16851 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-RPPH1 RNA45S5 chrUn_gl000220 118516 + RPPH1 chr14 20811450 - Exonic hg19 BLCA TCGA-BL-A13J-01A 4 302 Out-of-frame Inter-chr q11.2 16852 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-RMRP RNA45S5 chrUn_gl000220 118502 + RMRP chr9 35657960 - Exonic hg19 BLCA TCGA-BL-A13J-01A 4 97 Out-of-frame Inter-chr p13.3 16853 ChimerSeq STARFusion TCGA_RNA-Seq B3GALTL-TEX26 B3GALTL chr13 31835219 + TEX26 chr13 31548983 + Exonic hg19 BLCA TCGA-BL-A13J-01A 9 22 Out-of-frame Intra-chr q12.3 16854 ChimerSeq STARFusion TCGA_RNA-Seq USP34-FAM161A USP34 chr2 61486846 - FAM161A chr2 62054393 - Exonic hg19 BLCA TCGA-BL-A13J-01A 5 36 In-Frame Intra-chr p15 p15 Seq+ 16855 ChimerSeq STARFusion TCGA_RNA-Seq DENND4C-ACER2 DENND4C chr9 19230831 + ACER2 chr9 19446279 + Exonic hg19 BLCA TCGA-BL-A13J-01A 10 0 5'UTR-CDS Intra-chr p22.1 p22.1 Seq+ 16856 ChimerSeq STARFusion TCGA_RNA-Seq CCBP2-GTDC2 CCBP2 chr3 42861203 + GTDC2 chr3 43123028 - Exonic hg19 BLCA TCGA-BL-A13J-01A 4 22 Out-of-frame Intra-chr 16857 ChimerSeq STARFusion TCGA_RNA-Seq CCBP2-GTDC2 CCBP2 chr3 42851024 + GTDC2 chr3 43123028 - Exonic hg19 BLCA TCGA-BL-A13J-01A 3 22 Out-of-frame Intra-chr 16858 ChimerSeq STARFusion TCGA_RNA-Seq PSPC1-MPHOSPH8 PSPC1 chr13 20315705 - MPHOSPH8 chr13 20233135 + Exonic hg19 BLCA TCGA-BL-A13J-01A 4 11 Out-of-frame Intra-chr q12.11 q12.11 Seq+ 16859 ChimerSeq STARFusion TCGA_RNA-Seq TSEN2-PPARG TSEN2 chr3 12545283 + PPARG chr3 12434113 + Exonic hg19 BLCA TCGA-BL-A13J-01A 4 9 In-Frame Intra-chr p25.2 p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 16860 ChimerSeq STARFusion TCGA_RNA-Seq TSEN2-PPARG TSEN2 chr3 12546730 + PPARG chr3 12434113 + Exonic hg19 BLCA TCGA-BL-A13J-01A 2 9 In-Frame Intra-chr p25.2 p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 16861 ChimerSeq STARFusion TCGA_RNA-Seq MGST3-UCK2 MGST3 chr1 165600530 + UCK2 chr1 165859441 + Exonic hg19 BLCA TCGA-BL-A13J-01A 2 4 5'UTR-CDS Intra-chr q24.1 q24.1 Seq+ 16862 ChimerSeq STARFusion TCGA_RNA-Seq MGST3-UCK2 MGST3 chr1 165619201 + UCK2 chr1 165859441 + Exonic hg19 BLCA TCGA-BL-A13J-01A 2 4 In-Frame Intra-chr q24.1 q24.1 Seq+ 16863 ChimerSeq STARFusion TCGA_RNA-Seq PPAP2A-DHX29 PPAP2A chr5 54763697 - DHX29 chr5 54572234 - Exonic hg19 BLCA TCGA-BL-A13J-01A 2 2 Out-of-frame Intra-chr q11.2 16864 ChimerSeq STARFusion TCGA_RNA-Seq LRRK2-MON2 LRRK2 chr12 40637483 + MON2 chr12 62972225 + Exonic hg19 BLCA TCGA-BT-A20X-01A 2 2 Out-of-frame Intra-chr q12 TKL:LRRK q14.1 16865 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R2-SCO2 PPP6R2 chr22 50870758 + SCO2 chr22 50962853 - Exonic hg19 BLCA TCGA-BT-A20X-01A 2 2 CDS-5'UTR Intra-chr q13.33 q13.33 16866 ChimerSeq STARFusion TCGA_RNA-Seq NOL12-LGALS1 NOL12 chr22 38084999 + LGALS1 chr22 38072993 + Exonic hg19 BLCA TCGA-G2-A2ES-01A 201 783 In-Frame Intra-chr q13.1 q13.1 Seq+ 16867 ChimerSeq STARFusion TCGA_RNA-Seq HMGA2-MSRB3 HMGA2 chr12 66221867 + MSRB3 chr12 65856935 + Exonic hg19 BLCA TCGA-G2-A2ES-01A 126 674 In-Frame Intra-chr q14.3 Transcription factor q14.3 Seq+ 16868 ChimerSeq STARFusion TCGA_RNA-Seq ELP2-FHOD3 ELP2 chr18 33718389 + FHOD3 chr18 34081895 + Exonic hg19 BLCA TCGA-G2-A2ES-01A 8 10 In-Frame Intra-chr q12.2 q12.2 Seq+ 16869 ChimerSeq STARFusion TCGA_RNA-Seq SF3B3-DDX19B SF3B3 chr16 70572363 + DDX19B chr16 70346512 + Exonic hg19 BLCA TCGA-G2-A2ES-01A 2 15 In-Frame Intra-chr q22.1 q22.1 Seq+ 16870 ChimerSeq STARFusion TCGA_RNA-Seq SF3B3-DDX19B SF3B3 chr16 70573110 + DDX19B chr16 70346512 + Exonic hg19 BLCA TCGA-G2-A2ES-01A 2 15 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 16871 ChimerSeq STARFusion TCGA_RNA-Seq TFRC-TCTEX1D2 TFRC chr3 195803935 - TCTEX1D2 chr3 196043102 - Exonic hg19 BLCA TCGA-G2-A2ES-01A 2 8 Out-of-frame Intra-chr q29 q29 Seq+ 16872 ChimerSeq STARFusion TCGA_RNA-Seq RPSAP52-HMGA2 RPSAP52 chr12 66220623 - HMGA2 chr12 66221781 + Exonic hg19 BLCA TCGA-G2-A2ES-01A 2 6 3'UTR-CDS Intra-chr q14.3 q14.3 Transcription factor 16873 ChimerSeq STARFusion TCGA_RNA-Seq FLJ31306-PSMA3 FLJ31306 chr14 58758353 - PSMA3 chr14 58737136 + Exonic hg19 BLCA TCGA-G2-A2ES-01A 2 0 3'UTR-CDS Intra-chr q23.1 Seq+ 16874 ChimerSeq STARFusion TCGA_RNA-Seq COBLL1-SCN3A COBLL1 chr2 165697666 - SCN3A chr2 166027058 - Exonic hg19 BLCA TCGA-FD-A6TA-01A 7 23 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 16875 ChimerSeq STARFusion TCGA_RNA-Seq COBLL1-SCN3A COBLL1 chr2 165697666 - SCN3A chr2 166021030 - Exonic hg19 BLCA TCGA-FD-A6TA-01A 4 23 In-Frame Intra-chr q24.3 q24.3 Seq+ 16876 ChimerSeq STARFusion TCGA_RNA-Seq STK25-ELK2AP STK25 chr2 242434915 - ELK2AP chr14 106136184 - Exonic hg19 BLCA TCGA-FD-A6TA-01A 9 0 Out-of-frame Inter-chr q37.3 16877 ChimerSeq STARFusion TCGA_RNA-Seq PAPPA2-RPS19 PAPPA2 chr1 176640251 + RPS19 chr19 42373101 + Exonic hg19 BLCA TCGA-FJ-A3Z7-01A 12 58 In-Frame Inter-chr q25.2 q13.2 Seq+ 16878 ChimerSeq STARFusion TCGA_RNA-Seq MIR611-SCGB1D2 MIR611 chr11 61560028 - SCGB1D2 chr11 62010761 + Exonic hg19 BLCA TCGA-FJ-A3Z7-01A 8 7 3'UTR-CDS Intra-chr q12.2 q12.3 Seq+ 16879 ChimerSeq STARFusion TCGA_RNA-Seq SRSF4-CREB5 SRSF4 chr1 29508158 - CREB5 chr7 28843816 + Exonic hg19 BLCA TCGA-FJ-A3Z7-01A 5 19 Out-of-frame Inter-chr p35.3 p15.1 Transcription factor Seq+ 16880 ChimerSeq STARFusion TCGA_RNA-Seq TMEM258-SCGB1D2 TMEM258 chr11 61560028 - SCGB1D2 chr11 62010761 + Exonic hg19 BLCA TCGA-FJ-A3Z7-01A 8 7 Out-of-frame Intra-chr q12.2 q12.3 Seq+ 16881 ChimerSeq STARFusion TCGA_RNA-Seq COL6A2-FTCD COL6A2 chr21 47546455 + FTCD chr21 47558837 - Exonic hg19 BLCA TCGA-FJ-A3Z7-01A 4 11 Out-of-frame Intra-chr q22.3 16882 ChimerSeq STARFusion TCGA_RNA-Seq GPR89C-LOC100288079 GPR89C chr1 145919047 + LOC100288079 chr1 185303519 - Exonic hg19 BLCA TCGA-FJ-A3Z7-01A 2 2 5'UTR-3'UTR Intra-chr 16883 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2-CCBL2 NOTCH2 chr1 120469122 - CCBL2 chr1 89414960 - Exonic hg19 BLCA TCGA-FJ-A3Z7-01A 2 1 In-Frame Intra-chr p12 Oncogene Tumor suppressor gene 16884 ChimerSeq STARFusion TCGA_RNA-Seq CD44-PDHX CD44 chr11 35198287 + PDHX chr11 34988187 + Exonic hg19 BLCA TCGA-ZF-AA4V-01A 101 360 In-Frame Intra-chr p13 Oncogene Tumor suppressor gene p13 Seq+ 16885 ChimerSeq STARFusion TCGA_RNA-Seq AKAP8-BRD4 AKAP8 chr19 15487787 - BRD4 chr19 15367984 - Exonic hg19 BLCA TCGA-ZF-AA4V-01A 9 16 Out-of-frame Intra-chr p13.12 Transcription factor p13.12 Atypical:BRD 16886 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57737949 + VMP1 chr17 57895073 + Exonic hg19 BLCA TCGA-ZF-AA4V-01A 4 20 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 16887 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57763169 + VMP1 chr17 57915656 + Exonic hg19 BLCA TCGA-ZF-AA4V-01A 2 20 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 16888 ChimerSeq STARFusion TCGA_RNA-Seq AKAP8-BRD4 AKAP8 chr19 15490524 - BRD4 chr19 15367984 - Exonic hg19 BLCA TCGA-ZF-AA4V-01A 2 16 Out-of-frame Intra-chr p13.12 Transcription factor p13.12 Atypical:BRD 16889 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1D-DUS1L CSNK1D chr17 80203852 - DUS1L chr17 80022945 - Exonic hg19 BLCA TCGA-ZF-AA4V-01A 3 8 3'UTR-5'UTR Intra-chr q25.3 q25.3 Seq+ 16890 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-MRPS30 NIPBL chr5 36877280 + MRPS30 chr5 44811111 + Exonic hg19 BLCA TCGA-ZF-AA4V-01A 4 4 5'UTR-CDS Intra-chr p13.2 p12 Seq+ 16891 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-CD99 ZC3H7A chr16 11868092 - CD99 chrX 2632463 + Exonic hg19 BLCA TCGA-ZF-AA4V-01A 2 7 CDS-3'UTR Inter-chr p13.13 p22.33 Seq+ 16892 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-EXOC3 CPSF6 chr12 69656342 + EXOC3 chr5 464405 + Exonic hg19 BLCA TCGA-ZF-AA4V-01A 2 5 3'UTR-CDS Inter-chr q15 p15.33 Seq+ 16893 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-PVT1 CPSF6 chr12 69656342 + PVT1 chr8 129113226 + Exonic hg19 BLCA TCGA-ZF-AA4V-01A 2 2 3'UTR-5'UTR Inter-chr q15 q24.21 16894 ChimerSeq STARFusion TCGA_RNA-Seq GPX4-STK11 GPX4 chr19 1106458 + STK11 chr19 1226453 + Exonic hg19 BLCA TCGA-ZF-AA4V-01A 2 1 In-Frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene 16895 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-CD99 ZC3H7A chr16 11868092 - CD99 chrY 2582463 + Exonic hg19 BLCA TCGA-ZF-AA4V-01A 2 1 Out-of-frame Inter-chr p13.13 p22.33 Seq+ 16896 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V0A1-STAT5A ATP6V0A1 chr17 40610981 + STAT5A chr17 40440074 + Exonic hg19 BLCA TCGA-BT-A20U-01A 13 38 5'UTR-5'UTR Intra-chr q21.2 q21.2 Tumor suppressor gene Transcription factor Seq+ 16897 ChimerSeq STARFusion TCGA_RNA-Seq IQSEC1-WNT7A IQSEC1 chr3 12954928 - WNT7A chr3 13916670 - Exonic hg19 BLCA TCGA-GV-A3JV-01A 100 703 Out-of-frame Intra-chr p25.2 p25.1 Tumor suppressor gene Seq+ 16898 ChimerSeq STARFusion TCGA_RNA-Seq IQSEC1-WNT7A IQSEC1 chr3 12961930 - WNT7A chr3 13916670 - Exonic hg19 BLCA TCGA-GV-A3JV-01A 50 703 Out-of-frame Intra-chr p25.2 p25.1 Tumor suppressor gene Seq+ 16899 ChimerSeq STARFusion TCGA_RNA-Seq IQSEC1-WNT7A IQSEC1 chr3 12963620 - WNT7A chr3 13916670 - Exonic hg19 BLCA TCGA-GV-A3JV-01A 12 703 In-Frame Intra-chr p25.2 p25.1 Tumor suppressor gene Seq+ 16900 ChimerSeq STARFusion TCGA_RNA-Seq PPARG-IQSEC1 PPARG chr3 12458653 + IQSEC1 chr3 12983365 - Exonic hg19 BLCA TCGA-GV-A3JV-01A 4 67 Out-of-frame Intra-chr p25.2 Oncogene Tumor suppressor gene Transcription factor p25.2 Seq+ 16901 ChimerSeq STARFusion TCGA_RNA-Seq DHRS2-GSTM2 DHRS2 chr14 24105981 + GSTM2 chr1 110213909 + Exonic hg19 BLCA TCGA-GV-A3JV-01A 9 28 5'UTR-CDS Inter-chr q11.2 p13.3 16902 ChimerSeq STARFusion TCGA_RNA-Seq WNT7A-PPFIA1 WNT7A chr3 13896029 - PPFIA1 chr11 70221024 + Exonic hg19 BLCA TCGA-GV-A3JV-01A 6 20 Out-of-frame Inter-chr p25.1 Tumor suppressor gene q13.3 Seq+ 16903 ChimerSeq STARFusion TCGA_RNA-Seq PHC3-IQSEC1 PHC3 chr3 169890345 - IQSEC1 chr3 12983365 - Exonic hg19 BLCA TCGA-GV-A3JV-01A 3 0 Out-of-frame Intra-chr q26.2 Tumor suppressor gene p25.2 16904 ChimerSeq STARFusion TCGA_RNA-Seq PPIP5K1-CATSPER2 PPIP5K1 chr15 43857065 - CATSPER2 chr15 43940261 - Exonic hg19 BLCA TCGA-GV-A3JV-01A 2 1 CDS-5'UTR Intra-chr q15.3 q15.3 16905 ChimerSeq STARFusion TCGA_RNA-Seq PIGU-NCOA6 PIGU chr20 33233079 - NCOA6 chr20 33315211 - Exonic hg19 BLCA TCGA-FD-A6TH-01A 3 23 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 16906 ChimerSeq STARFusion TCGA_RNA-Seq PIGU-NCOA6 PIGU chr20 33244984 - NCOA6 chr20 33315211 - Exonic hg19 BLCA TCGA-FD-A6TH-01A 2 23 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 16907 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-ABR STARD3 chr17 37793484 + ABR chr17 973330 - Exonic hg19 BLCA TCGA-FD-A6TH-01A 4 10 5'UTR-CDS Intra-chr q12 p13.3 Seq+ 16908 ChimerSeq STARFusion TCGA_RNA-Seq METRNL-DYNLL2 METRNL chr17 81043199 + DYNLL2 chr17 56164443 + Exonic hg19 BLCA TCGA-FD-A6TH-01A 2 10 CDS-5'UTR Intra-chr q22 Seq+ 16909 ChimerSeq STARFusion TCGA_RNA-Seq LLGL2-AP2B1 LLGL2 chr17 73569712 + AP2B1 chr17 34036243 + Exonic hg19 BLCA TCGA-FD-A6TH-01A 2 9 Out-of-frame Intra-chr q25.1 q12 Seq+ 16910 ChimerSeq STARFusion TCGA_RNA-Seq ARRDC1-EHMT1 ARRDC1 chr9 140509452 + EHMT1 chr9 140611078 + Exonic hg19 BLCA TCGA-FD-A6TH-01A 2 5 In-Frame Intra-chr q34.3 q34.3 Seq+ 16911 ChimerSeq STARFusion TCGA_RNA-Seq PHRF1-EPS8L2 PHRF1 chr11 582081 + EPS8L2 chr11 720062 + Exonic hg19 BLCA TCGA-GU-A42Q-01A 17 49 Out-of-frame Intra-chr p15.5 p15.5 Seq+ 16912 ChimerSeq STARFusion TCGA_RNA-Seq SMAD3-AAGAB SMAD3 chr15 67418322 + AAGAB chr15 67529158 - Exonic hg19 BLCA TCGA-GU-A42Q-01A 10 58 5'UTR-CDS Intra-chr q22.33 Transcription factor q23 Seq+ 16913 ChimerSeq STARFusion TCGA_RNA-Seq SMAD3-AAGAB SMAD3 chr15 67430438 + AAGAB chr15 67529158 - Exonic hg19 BLCA TCGA-GU-A42Q-01A 8 58 Out-of-frame Intra-chr q22.33 Transcription factor q23 Seq+ 16914 ChimerSeq STARFusion TCGA_RNA-Seq PIR-TMEM27 PIR chrX 15509285 - TMEM27 chrX 15682518 - Exonic hg19 BLCA TCGA-GU-A42Q-01A 11 41 Out-of-frame Intra-chr p22.2 p22.2 Seq+ 16915 ChimerSeq STARFusion TCGA_RNA-Seq PHRF1-EPS8L2 PHRF1 chr11 582387 + EPS8L2 chr11 720062 + Exonic hg19 BLCA TCGA-GU-A42Q-01A 3 49 Out-of-frame Intra-chr p15.5 p15.5 Seq+ 16916 ChimerSeq STARFusion TCGA_RNA-Seq PIR-TMEM27 PIR chrX 15509285 - TMEM27 chrX 15677224 - Exonic hg19 BLCA TCGA-GU-A42Q-01A 3 41 In-Frame Intra-chr p22.2 p22.2 Seq+ 16917 ChimerSeq STARFusion TCGA_RNA-Seq TECR-ICAM3 TECR chr19 14640523 + ICAM3 chr19 10449624 - Exonic hg19 BLCA TCGA-GU-A42Q-01A 5 26 Out-of-frame Intra-chr p13.12 p13.2 Seq+ 16918 ChimerSeq STARFusion TCGA_RNA-Seq ZNF808-C19orf21 ZNF808 chr19 53030964 + C19orf21 chr19 756890 + Exonic hg19 BLCA TCGA-GU-A42Q-01A 5 13 5'UTR-5'UTR Intra-chr q13.41 Transcription factor Seq+ 16919 ChimerSeq STARFusion TCGA_RNA-Seq ATF2-SOS2 ATF2 chr2 175976296 - SOS2 chr14 50641270 - Exonic hg19 BLCA TCGA-GU-A42Q-01A 3 14 In-Frame Inter-chr q31.1 Transcription factor q21.3 Seq+ 16920 ChimerSeq STARFusion TCGA_RNA-Seq BMP7-MACROD2 BMP7 chr20 55777531 - MACROD2 chr20 15412050 + Exonic hg19 BLCA TCGA-GU-A42Q-01A 4 6 Out-of-frame Intra-chr q13.31 p12.1 Seq+ 16921 ChimerSeq STARFusion TCGA_RNA-Seq OBFC1-PCGF3 OBFC1 chr10 105664849 - PCGF3 chr4 755067 + Exonic hg19 BLCA TCGA-GU-A42Q-01A 2 9 Out-of-frame Inter-chr p16.3 Seq+ 16922 ChimerSeq STARFusion TCGA_RNA-Seq RBM27-SLC35E2B RBM27 chr5 145598666 + SLC35E2B chr1 1597458 - Exonic hg19 BLCA TCGA-CU-A0YO-01A 8 28 Out-of-frame Inter-chr q32 p36.33 Seq+ 16923 ChimerSeq STARFusion TCGA_RNA-Seq RAB4A-SNRPB RAB4A chr1 229407117 + SNRPB chr20 2448404 - Exonic hg19 BLCA TCGA-CU-A0YO-01A 7 18 Out-of-frame Inter-chr q42.13 p13 Seq+ 16924 ChimerSeq STARFusion TCGA_RNA-Seq RBM17-PSAP RBM17 chr10 6131156 + PSAP chr10 73594262 - Exonic hg19 BLCA TCGA-CU-A0YO-01A 7 2 5'UTR-CDS Intra-chr p15.1 q22.1 Seq+ 16925 ChimerSeq STARFusion TCGA_RNA-Seq SNRPB-RAB4A SNRPB chr20 2451334 - RAB4A chr1 229422233 + Exonic hg19 BLCA TCGA-CU-A0YO-01A 2 15 Out-of-frame Inter-chr p13 q42.13 Seq+ 16926 ChimerSeq STARFusion TCGA_RNA-Seq ZNF598-C16orf62 ZNF598 chr16 2059525 - C16orf62 chr16 19702675 + Exonic hg19 BLCA TCGA-HQ-A2OE-01A 26 133 Out-of-frame Intra-chr p13.3 Transcription factor p12.3 Seq+ 16927 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57886157 + Exonic hg19 BLCA TCGA-HQ-A2OE-01A 30 46 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 16928 ChimerSeq STARFusion TCGA_RNA-Seq SSBP3-EDA SSBP3 chr1 54867534 - EDA chrX 69080688 + Exonic hg19 BLCA TCGA-HQ-A2OE-01A 16 81 In-Frame Inter-chr p32.3 q13.1 Seq+ 16929 ChimerSeq STARFusion TCGA_RNA-Seq SPINK1-C5orf46 SPINK1 chr5 147207585 - C5orf46 chr5 147281336 - Exonic hg19 BLCA TCGA-HQ-A2OE-01A 11 69 Out-of-frame Intra-chr q32 q32 Seq+ 16930 ChimerSeq STARFusion TCGA_RNA-Seq SSBP3-EDA SSBP3 chr1 54867534 - EDA chrX 69176877 + Exonic hg19 BLCA TCGA-HQ-A2OE-01A 3 81 In-Frame Inter-chr p32.3 q13.1 Seq+ 16931 ChimerSeq STARFusion TCGA_RNA-Seq EPHX2-PTK2B EPHX2 chr8 27375589 + PTK2B chr8 27308266 + Exonic hg19 BLCA TCGA-HQ-A2OE-01A 8 39 In-Frame Intra-chr p21.2 p21.2 Seq+ 16932 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-CYB5B NFAT5 chr16 69602451 + CYB5B chr16 69492996 + Exonic hg19 BLCA TCGA-HQ-A2OE-01A 8 33 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 16933 ChimerSeq STARFusion TCGA_RNA-Seq ZNF544-CCDC61 ZNF544 chr19 58758160 + CCDC61 chr19 46506266 + Exonic hg19 BLCA TCGA-HQ-A2OE-01A 10 25 In-Frame Intra-chr q13.43 Transcription factor q13.32 Seq+ 16934 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1731-WDR90 KIAA1731 chr11 93440063 + WDR90 chr16 705307 + Exonic hg19 BLCA TCGA-HQ-A2OE-01A 5 31 Out-of-frame Inter-chr p13.3 Seq+ 16935 ChimerSeq STARFusion TCGA_RNA-Seq EHMT1-ARRDC1 EHMT1 chr9 140513501 + ARRDC1 chr9 140507348 + Exonic hg19 BLCA TCGA-HQ-A2OE-01A 6 1 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 16936 ChimerSeq STARFusion TCGA_RNA-Seq GNPAT-TRIM67 GNPAT chr1 231386889 + TRIM67 chr1 231344693 + Exonic hg19 BLCA TCGA-HQ-A2OE-01A 4 9 Out-of-frame Intra-chr q42.2 q42.2 Seq+ 16937 ChimerSeq STARFusion TCGA_RNA-Seq SLC22A23-ECHDC1 SLC22A23 chr6 3324068 - ECHDC1 chr6 127652175 - Exonic hg19 BLCA TCGA-HQ-A2OE-01A 2 11 Out-of-frame Intra-chr p25.2 q22.33 Seq+ 16938 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP19-RRP12 ARHGAP19 chr10 99052329 - RRP12 chr10 99161125 - Exonic hg19 BLCA TCGA-HQ-A2OE-01A 3 2 CDS-5'UTR Intra-chr q24.1 q24.1 Seq+ 16939 ChimerSeq STARFusion TCGA_RNA-Seq EXOC6B-SFXN5 EXOC6B chr2 73052927 - SFXN5 chr2 73198814 - Exonic hg19 BLCA TCGA-HQ-A2OE-01A 2 2 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 16940 ChimerSeq STARFusion TCGA_RNA-Seq PGAM5-PXMP2 PGAM5 chr12 133294706 + PXMP2 chr12 133266849 + Exonic hg19 BLCA TCGA-HQ-A2OE-01A 2 1 In-Frame Intra-chr q24.33 q24.33 16941 ChimerSeq STARFusion TCGA_RNA-Seq DHRS2-GSTM2 DHRS2 chr14 24105981 + GSTM2 chr1 110213909 + Exonic hg19 BLCA TCGA-K4-A54R-01A 2 7 5'UTR-CDS Inter-chr q11.2 p13.3 16942 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1324L-TUSC3 KIAA1324L chr7 86669419 - TUSC3 chr8 15480589 + Exonic hg19 BLCA TCGA-K4-A54R-01A 3 0 3'UTR-CDS Inter-chr q21.12 p22 16943 ChimerSeq STARFusion TCGA_RNA-Seq FUBP1-CHMP1A FUBP1 chr1 78414840 - CHMP1A chr16 89713739 - Exonic hg19 BLCA TCGA-K4-A54R-01A 2 1 In-Frame Inter-chr p31.1 Oncogene q24.3 16944 ChimerSeq STARFusion TCGA_RNA-Seq DNMT3B-DUSP15 DNMT3B chr20 31376818 + DUSP15 chr20 30457400 - Exonic hg19 BLCA TCGA-K4-A3WS-01A 2 14 In-Frame Intra-chr q11.21 Tumor suppressor gene q11.21 Seq+ 16945 ChimerSeq STARFusion TCGA_RNA-Seq ITGB6-RBMS1 ITGB6 chr2 160993945 - RBMS1 chr2 161159998 - Exonic hg19 BLCA TCGA-K4-A3WS-01A 3 5 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 16946 ChimerSeq STARFusion TCGA_RNA-Seq RARG-BCAS1 RARG chr12 53621146 - BCAS1 chr20 52675262 - Exonic hg19 BLCA TCGA-K4-A3WS-01A 2 6 CDS-5'UTR Inter-chr q13.13 Transcription factor q13.2 Seq+ 16947 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808925 + TACC3 chr4 1741371 + Exonic hg19 BLCA TCGA-CF-A3MF-01A 218 764 Out-of-frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 16948 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 BLCA TCGA-CF-A3MF-01A 82 764 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 16949 ChimerSeq STARFusion TCGA_RNA-Seq ACTG1-LOC100130331 ACTG1 chr17 79479258 - LOC100130331 chr1 238090331 + Exonic hg19 BLCA TCGA-LT-A8JT-01A 87 7 CDS-5'UTR Inter-chr q25.3 16950 ChimerSeq STARFusion TCGA_RNA-Seq NEK4-SETD2 NEK4 chr3 52771602 - SETD2 chr3 47108608 - Exonic hg19 BLCA TCGA-DK-A1AF-01A 3 12 In-Frame Intra-chr p21.1 Other:NEK p21.31 Oncogene Tumor suppressor gene Seq+ 16951 ChimerSeq STARFusion TCGA_RNA-Seq SEC11A-DDX39B SEC11A chr15 85259256 - DDX39B chr6 31500688 - Exonic hg19 BLCA TCGA-DK-A1AF-01A 3 0 In-Frame Inter-chr q25.3 Seq+ 16952 ChimerSeq STARFusion TCGA_RNA-Seq RPL36AL-MAP4K5 RPL36AL chr14 50087280 - MAP4K5 chr14 50923312 - Exonic hg19 BLCA TCGA-DK-A2I2-01A 6 3 5'UTR-CDS Intra-chr q21.3 q22.1 Seq+ 16953 ChimerSeq STARFusion TCGA_RNA-Seq ACACA-TADA2A ACACA chr17 35766352 - TADA2A chr17 35783609 + Exonic hg19 BLCA TCGA-DK-A2I2-01A 4 8 Out-of-frame Intra-chr q12 Seq+ 16954 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57737949 + VMP1 chr17 57915656 + Exonic hg19 BLCA TCGA-DK-A2I2-01A 2 9 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 16955 ChimerSeq STARFusion TCGA_RNA-Seq TADA2A-C17orf78 TADA2A chr17 35822225 + C17orf78 chr17 35734817 + Exonic hg19 BLCA TCGA-DK-A2I2-01A 2 2 In-Frame Intra-chr q12 Seq+ 16956 ChimerSeq STARFusion TCGA_RNA-Seq HDGFRP2-CHAF1A HDGFRP2 chr19 4475580 + CHAF1A chr19 4442242 + Exonic hg19 BLCA TCGA-ZF-A9R5 6 26 In-Frame Intra-chr p13.3 16957 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-CSN1S2AP PPP6R3 chr11 68228295 + CSN1S2AP chr4 70944471 + Exonic hg19 BLCA TCGA-FD-A62S-01A 25 73 5'UTR-5'UTR Inter-chr q13.2 Seq+ 16958 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-SHANK2 PPP6R3 chr11 68343511 + SHANK2 chr11 70858384 - Exonic hg19 BLCA TCGA-FD-A62S-01A 14 66 CDS-5'UTR Intra-chr q13.2 q13.4 Seq+ 16959 ChimerSeq STARFusion TCGA_RNA-Seq ZMPSTE24-SMAP2 ZMPSTE24 chr1 40737707 + SMAP2 chr1 40872408 + Exonic hg19 BLCA TCGA-FD-A62S-01A 7 35 In-Frame Intra-chr p34.2 p34.2 Seq+ 16960 ChimerSeq STARFusion TCGA_RNA-Seq RAB30-DPP3 RAB30 chr11 82782733 - DPP3 chr11 66272083 + Exonic hg19 BLCA TCGA-FD-A62S-01A 3 16 5'UTR-CDS Intra-chr q14.1 q13.2 Seq+ 16961 ChimerSeq STARFusion TCGA_RNA-Seq TRAF7-MAPK8IP3 TRAF7 chr16 2214002 + MAPK8IP3 chr16 1816905 + Exonic hg19 BLCA TCGA-FD-A6TD-01A 38 51 Out-of-frame Intra-chr p13.3 Oncogene p13.3 Seq+ 16962 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57733388 + VMP1 chr17 57915656 + Exonic hg19 BLCA TCGA-FD-A6TD-01A 25 55 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 16963 ChimerSeq STARFusion TCGA_RNA-Seq TFDP1-CUL4A TFDP1 chr13 114286059 + CUL4A chr13 113883760 + Exonic hg19 BLCA TCGA-FD-A6TD-01A 2 10 Out-of-frame Intra-chr q34 Transcription factor q34 Seq+ 16964 ChimerSeq STARFusion TCGA_RNA-Seq UBE2L3-PI4KAP2 UBE2L3 chr22 21947245 + PI4KAP2 chr22 21838423 - Exonic hg19 BLCA TCGA-FD-A6TD-01A 2 1 CDS-3'UTR Intra-chr q11.21 q11.21 16965 ChimerSeq STARFusion TCGA_RNA-Seq PPHLN1-LOC100240734 PPHLN1 chr12 42729776 + LOC100240734 chr12 54495998 + Exonic hg19 BLCA TCGA-FD-A5BR-01A 3 11 CDS-5'UTR Intra-chr q12 16966 ChimerSeq STARFusion TCGA_RNA-Seq PARD3-RNF152 PARD3 chr10 34739245 - RNF152 chr18 59483831 - Exonic hg19 BLCA TCGA-FD-A5BR-01A 2 1 CDS-5'UTR Inter-chr p11.21 q21.33 16967 ChimerSeq STARFusion TCGA_RNA-Seq ITGB6-RBMS1 ITGB6 chr2 160998493 - RBMS1 chr2 161143595 - Exonic hg19 BLCA TCGA-ZF-A9R1 6 25 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 16968 ChimerSeq STARFusion TCGA_RNA-Seq PFKP-ACLY PFKP chr10 3151672 + ACLY chr17 40025840 - Exonic hg19 BLCA TCGA-ZF-A9R1 2 1 In-Frame Inter-chr p15.2 q21.2 16969 ChimerSeq STARFusion TCGA_RNA-Seq MYO5B-CCDC11 MYO5B chr18 47721137 - CCDC11 chr18 47788589 - Exonic hg19 BLCA TCGA-GV-A3JZ-01A 18 52 In-Frame Intra-chr q21.1 Seq+ 16970 ChimerSeq STARFusion TCGA_RNA-Seq STK38-ZNF184 STK38 chr6 36474360 - ZNF184 chr6 27425188 - Exonic hg19 BLCA TCGA-GV-A3JZ-01A 7 76 In-Frame Intra-chr p21.31 p22.1 Transcription factor Seq+ 16971 ChimerSeq STARFusion TCGA_RNA-Seq MYO5B-CCDC11 MYO5B chr18 47721137 - CCDC11 chr18 47778154 - Exonic hg19 BLCA TCGA-GV-A3JZ-01A 2 52 Out-of-frame Intra-chr q21.1 Seq+ 16972 ChimerSeq STARFusion TCGA_RNA-Seq URI1-ZNF33A URI1 chr19 30496615 + ZNF33A chr10 38343306 + Exonic hg19 BLCA TCGA-GV-A3JZ-01A 2 18 In-Frame Inter-chr q12 p11.1 Transcription factor Seq+ 16973 ChimerSeq STARFusion TCGA_RNA-Seq GPR110-MEP1A GPR110 chr6 47009927 - MEP1A chr6 46800811 + Exonic hg19 BLCA TCGA-GV-A3JZ-01A 2 12 5'UTR-CDS Intra-chr p12.3 Seq+ 16974 ChimerSeq STARFusion TCGA_RNA-Seq RNF213-IL22RA1 RNF213 chr17 78237577 + IL22RA1 chr1 24465204 - Exonic hg19 BLCA TCGA-GV-A3JZ-01A 3 7 In-Frame Inter-chr q25.3 Oncogene p36.11 Seq+ 16975 ChimerSeq STARFusion TCGA_RNA-Seq CDKAL1-RCAN2 CDKAL1 chr6 20781496 + RCAN2 chr6 46424715 - Exonic hg19 BLCA TCGA-GV-A3JZ-01A 2 9 CDS-5'UTR Intra-chr p22.3 p12.3 Seq+ 16976 ChimerSeq STARFusion TCGA_RNA-Seq LOC100129917-CPLX1 LOC100129917 chr4 775560 - CPLX1 chr4 780486 - Exonic hg19 BLCA TCGA-GV-A3JZ-01A 2 9 3'UTR-CDS Intra-chr p16.3 16977 ChimerSeq STARFusion TCGA_RNA-Seq NDUFS2-PSMD4 NDUFS2 chr1 161176387 + PSMD4 chr1 151234637 + Exonic hg19 BLCA TCGA-GV-A3JZ-01A 2 7 Out-of-frame Intra-chr q23.3 q21.3 Seq+ 16978 ChimerSeq STARFusion TCGA_RNA-Seq ZNF430-KCNIP4 ZNF430 chr19 21216990 + KCNIP4 chr4 20852290 - Exonic hg19 BLCA TCGA-GV-A3JZ-01A 2 7 In-Frame Inter-chr Transcription factor p15.2 Seq+ 16979 ChimerSeq STARFusion TCGA_RNA-Seq CDKAL1-TBC1D1 CDKAL1 chr6 20548936 + TBC1D1 chr4 38091553 + Exonic hg19 BLCA TCGA-GV-A3JZ-01A 2 3 In-Frame Inter-chr p22.3 p14 Seq+ 16980 ChimerSeq STARFusion TCGA_RNA-Seq URI1-ZNF33B URI1 chr19 30496615 + ZNF33B chr10 43090147 - Exonic hg19 BLCA TCGA-GV-A3JZ-01A 2 2 In-Frame Inter-chr q12 q11.21 Transcription factor 16981 ChimerSeq STARFusion TCGA_RNA-Seq MICALCL-USP47 MICALCL chr11 12348813 + USP47 chr11 11969492 + Exonic hg19 BLCA TCGA-GV-A3JZ-01A 2 1 In-Frame Intra-chr p15.3 p15.3 Seq+ 16982 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57763169 + VMP1 chr17 57915656 + Exonic hg19 BLCA TCGA-G2-AA3C 24 86 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 16983 ChimerSeq STARFusion TCGA_RNA-Seq MKRN2-FANCD2P2 MKRN2 chr3 12616505 + FANCD2P2 chr3 11923062 + Exonic hg19 BLCA TCGA-G2-AA3B 5 61 Out-of-frame Intra-chr p25.2 p25.2 Seq+ 16984 ChimerSeq STARFusion TCGA_RNA-Seq MKRN2-FANCD2P2 MKRN2 chr3 12616505 + FANCD2P2 chr3 11924489 + Exonic hg19 BLCA TCGA-G2-AA3B 5 43 Out-of-frame Intra-chr p25.2 p25.2 Seq+ 16985 ChimerSeq STARFusion TCGA_RNA-Seq MKRN2-FANCD2P2 MKRN2 chr3 12616505 + FANCD2P2 chr3 11912771 + Exonic hg19 BLCA TCGA-G2-AA3B 5 43 Out-of-frame Intra-chr p25.2 p25.2 Seq+ 16986 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHF2-NDUFAF6 PLEKHF2 chr8 96166740 + NDUFAF6 chr8 96070037 + Exonic hg19 BLCA TCGA-G2-AA3B 8 30 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 16987 ChimerSeq STARFusion TCGA_RNA-Seq MKRN2-FANCD2P2 MKRN2 chr3 12613872 + FANCD2P2 chr3 11924489 + Exonic hg19 BLCA TCGA-G2-AA3B 3 43 Out-of-frame Intra-chr p25.2 p25.2 Seq+ 16988 ChimerSeq STARFusion TCGA_RNA-Seq MKRN2-FANCD2P2 MKRN2 chr3 12616505 + FANCD2P2 chr3 11922351 + Exonic hg19 BLCA TCGA-G2-AA3B 2 43 Out-of-frame Intra-chr p25.2 p25.2 Seq+ 16989 ChimerSeq STARFusion TCGA_RNA-Seq CPNE1-ASIP CPNE1 chr20 34214143 - ASIP chr20 32848173 + Exonic hg19 BLCA TCGA-G2-AA3B 4 15 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 16990 ChimerSeq STARFusion TCGA_RNA-Seq ZMAT5-ASCC2 ZMAT5 chr22 30162938 - ASCC2 chr22 30189665 - Exonic hg19 BLCA TCGA-G2-AA3B 4 15 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 16991 ChimerSeq STARFusion TCGA_RNA-Seq KRT18P59-PKNOX2 KRT18P59 chr11 124995227 + PKNOX2 chr11 125104941 + Exonic hg19 BLCA TCGA-G2-AA3B 5 8 Out-of-frame Intra-chr q24.2 q24.2 Transcription factor 16992 ChimerSeq STARFusion TCGA_RNA-Seq FLNB-RHBDF1 FLNB chr3 57994583 + RHBDF1 chr16 115037 - Exonic hg19 BLCA TCGA-G2-AA3B 2 16 CDS-5'UTR Inter-chr p14.3 p13.3 Seq+ 16993 ChimerSeq STARFusion TCGA_RNA-Seq NRDE2-CATSPERB NRDE2 chr14 90798185 - CATSPERB chr14 92091351 - Exonic hg19 BLCA TCGA-G2-AA3B 3 9 Out-of-frame Intra-chr q32.11 Seq+ 16994 ChimerSeq STARFusion TCGA_RNA-Seq ESCO1-CPNE1 ESCO1 chr18 19180584 - CPNE1 chr20 34220845 - Exonic hg19 BLCA TCGA-G2-AA3B 3 6 5'UTR-5'UTR Inter-chr q11.2 q11.22 Seq+ 16995 ChimerSeq STARFusion TCGA_RNA-Seq ACOXL-KLHL23 ACOXL chr2 111526041 + KLHL23 chr2 170597895 + Exonic hg19 BLCA TCGA-G2-AA3F 22 77 Out-of-frame Intra-chr q13 q31.1 Seq+ 16996 ChimerSeq STARFusion TCGA_RNA-Seq UXS1-C2orf40 UXS1 chr2 106746130 - C2orf40 chr2 106688300 + Exonic hg19 BLCA TCGA-G2-AA3F 4 28 In-Frame Intra-chr q12.2 q12.2 Tumor suppressor gene Seq+ 16997 ChimerSeq STARFusion TCGA_RNA-Seq DMXL1-ARHGAP15 DMXL1 chr5 118407351 + ARHGAP15 chr2 144193170 + Exonic hg19 BLCA TCGA-G2-AA3F 3 16 In-Frame Inter-chr q23.1 q22.2 Seq+ 16998 ChimerSeq STARFusion TCGA_RNA-Seq DLEU2-MED4 DLEU2 chr13 50699438 - MED4 chr13 48664554 - Exonic hg19 BLCA TCGA-G2-AA3D 2 9 3'UTR-CDS Intra-chr q14.2 Tumor suppressor gene q14.2 Seq+ 16999 ChimerSeq STARFusion TCGA_RNA-Seq CCNL2-MRPL20 CCNL2 chr1 1333613 - MRPL20 chr1 1337636 - Exonic hg19 BLCA TCGA-G2-AA3D 2 2 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 17000 ChimerSeq STARFusion TCGA_RNA-Seq ATXN2-BRAP ATXN2 chr12 111947353 - BRAP chr12 112087846 - Exonic hg19 BLCA TCGA-G2-AA3D 2 1 In-Frame Intra-chr q24.12 q24.12 Seq+ 17001 ChimerSeq STARFusion TCGA_RNA-Seq HID1-SUMO2 HID1 chr17 72968686 - SUMO2 chr17 73177283 - Exonic hg19 BLCA TCGA-FD-A3SN-01A 4 3 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 17002 ChimerSeq STARFusion TCGA_RNA-Seq NISCH-PBRM1 NISCH chr3 52524849 + PBRM1 chr3 52643971 - Exonic hg19 BLCA TCGA-FD-A3SN-01A 2 4 In-Frame Intra-chr p21.1 p21.1 Oncogene Tumor suppressor gene Seq+ 17003 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 BLCA TCGA-GC-A3WC-01A 4 19 3'UTR-5'UTR Intra-chr q34 17004 ChimerSeq STARFusion TCGA_RNA-Seq LOC100133286-CBR3 LOC100133286 chr21 37442567 - CBR3 chr21 37507704 + Exonic hg19 BLCA TCGA-GC-A3WC-01A 3 1 Out-of-frame Intra-chr q22.12 17005 ChimerSeq STARFusion TCGA_RNA-Seq E2F3-MYL4 E2F3 chr6 20404063 + MYL4 chr17 45286755 + Exonic hg19 BLCA TCGA-GU-A764-01A 19 67 CDS-5'UTR Inter-chr p22.3 Tumor suppressor gene Transcription factor q21.32 Seq+ 17006 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L3-GPI SIPA1L3 chr19 38519796 + GPI chr19 34884153 + Exonic hg19 BLCA TCGA-GU-A764-01A 18 54 5'UTR-CDS Intra-chr q13.13 Seq+ 17007 ChimerSeq STARFusion TCGA_RNA-Seq E2F3-MYL4 E2F3 chr6 20402856 + MYL4 chr17 45286755 + Exonic hg19 BLCA TCGA-GU-A764-01A 3 67 CDS-5'UTR Inter-chr p22.3 Tumor suppressor gene Transcription factor q21.32 Seq+ 17008 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L3-GPI SIPA1L3 chr19 38519796 + GPI chr19 34884819 + Exonic hg19 BLCA TCGA-GU-A764-01A 3 54 5'UTR-CDS Intra-chr q13.13 Seq+ 17009 ChimerSeq STARFusion TCGA_RNA-Seq PARP14-DIRC2 PARP14 chr3 122439235 + DIRC2 chr3 122598110 + Exonic hg19 BLCA TCGA-GU-A764-01A 3 10 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 17010 ChimerSeq STARFusion TCGA_RNA-Seq SLC35E2B-PFKFB4 SLC35E2B chr1 1601103 - PFKFB4 chr3 48563102 - Exonic hg19 BLCA TCGA-GU-A764-01A 2 7 In-Frame Inter-chr p36.33 p21.31 Seq+ 17011 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 BLCA TCGA-CF-A3MG-01A 939 1730 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 17012 ChimerSeq STARFusion TCGA_RNA-Seq SHANK2-LRTOMT SHANK2 chr11 70644548 - LRTOMT chr11 71804542 + Exonic hg19 BLCA TCGA-CF-A3MG-01A 5 22 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 17013 ChimerSeq STARFusion TCGA_RNA-Seq TFDP1-UPF3A TFDP1 chr13 114265377 + UPF3A chr13 115070264 + Exonic hg19 BLCA TCGA-XF-AAN7 3 17 Out-of-frame Intra-chr q34 Transcription factor q34 Seq+ 17014 ChimerSeq STARFusion TCGA_RNA-Seq LDLRAD3-PAMR1 LDLRAD3 chr11 35965694 + PAMR1 chr11 35463241 - Exonic hg19 BLCA TCGA-XF-AAN7 2 2 In-Frame Intra-chr p13 p13 Seq+ 17015 ChimerSeq STARFusion TCGA_RNA-Seq ATP11B-NET1 ATP11B chr3 182616560 + NET1 chr10 5493793 + Exonic hg19 BLCA TCGA-XF-AAN4 4 4 In-Frame Inter-chr q26.33 Oncogene p15.1 Seq+ 17016 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57743601 + VMP1 chr17 57886157 + Exonic hg19 BLCA TCGA-XF-AAN4 3 3 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 17017 ChimerSeq STARFusion TCGA_RNA-Seq NACC1-CCDC74B NACC1 chr19 13229268 + CCDC74B chr2 130900886 - Exonic hg19 BLCA TCGA-FD-A3B6-01A 31 2 5'UTR-CDS Inter-chr p13.13 q21.1 Seq+ 17018 ChimerSeq STARFusion TCGA_RNA-Seq ADORA2B-SYN3 ADORA2B chr17 15848897 + SYN3 chr22 32992722 - Exonic hg19 BLCA TCGA-FD-A3B6-01A 9 24 Out-of-frame Inter-chr p12 q12.3 Seq+ 17019 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57763169 + VMP1 chr17 57886157 + Exonic hg19 BLCA TCGA-FD-A3B6-01A 7 16 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 17020 ChimerSeq STARFusion TCGA_RNA-Seq ADORA2B-TIMP3 ADORA2B chr17 15848897 + TIMP3 chr22 33197755 + Exonic hg19 BLCA TCGA-FD-A3B6-01A 5 7 CDS-5'UTR Inter-chr p12 q12.3 Oncogene Tumor suppressor gene Seq+ 17021 ChimerSeq STARFusion TCGA_RNA-Seq TRIB1-SAE1 TRIB1 chr8 126443504 + SAE1 chr19 47706928 + Exonic hg19 BLCA TCGA-XF-AAN0 3 7 Out-of-frame Inter-chr q24.13 q13.32 Seq+ 17022 ChimerSeq STARFusion TCGA_RNA-Seq TRIB1-SAE1 TRIB1 chr8 126443504 + SAE1 chr19 47712416 + Exonic hg19 BLCA TCGA-XF-AAN0 2 7 In-Frame Inter-chr q24.13 q13.32 Seq+ 17023 ChimerSeq STARFusion TCGA_RNA-Seq UQCRC2-CYB5RL UQCRC2 chr16 21968887 + CYB5RL chr1 54645025 - Exonic hg19 BLCA TCGA-R3-A69X-01A 10 22 In-Frame Inter-chr p32.3 Seq+ 17024 ChimerSeq STARFusion TCGA_RNA-Seq ZNF37A-LOC100507412 ZNF37A chr10 38385560 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BLCA TCGA-R3-A69X-01A 4 32 CDS-5'UTR Inter-chr p11.1 Transcription factor 17025 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1324L-TUSC3 KIAA1324L chr7 86669419 - TUSC3 chr8 15480589 + Exonic hg19 BLCA TCGA-R3-A69X-01A 2 1 3'UTR-CDS Inter-chr q21.12 p22 17026 ChimerSeq STARFusion TCGA_RNA-Seq TUFT1-ANXA9 TUFT1 chr1 151512902 + ANXA9 chr1 150955814 + Exonic hg19 BLCA TCGA-ZF-A9R4-01A 4 59 In-Frame Intra-chr q21.3 q21.3 Seq+ 17027 ChimerSeq STARFusion TCGA_RNA-Seq SUGT1-NOL6 SUGT1 chr13 53237247 + NOL6 chr9 33472410 - Exonic hg19 BLCA TCGA-ZF-A9R4-01A 2 1 In-Frame Inter-chr q14.3 p13.3 17028 ChimerSeq STARFusion TCGA_RNA-Seq YIPF1-TUFT1 YIPF1 chr1 54337045 - TUFT1 chr1 151534567 + Exonic hg19 BLCA TCGA-ZF-A9R4-01A 2 1 Out-of-frame Intra-chr p32.3 q21.3 17029 ChimerSeq STARFusion TCGA_RNA-Seq EEA1-LOC643339 EEA1 chr12 93322819 - LOC643339 chr12 93398374 - Exonic hg19 BLCA TCGA-K4-A3WU-01B 12 30 CDS-3'UTR Intra-chr q22 Transcription factor 17030 ChimerSeq STARFusion TCGA_RNA-Seq BCKDHB-TTK BCKDHB chr6 80912929 + TTK chr6 80751836 + Exonic hg19 BLCA TCGA-K4-A3WU-01B 8 37 In-Frame Intra-chr q14.1 q14.1 Other:TTK Seq+ 17031 ChimerSeq STARFusion TCGA_RNA-Seq DUSP16-GPR19 DUSP16 chr12 12639962 - GPR19 chr12 12837441 - Exonic hg19 BLCA TCGA-K4-A3WU-01B 12 19 CDS-5'UTR Intra-chr p13.1 Seq+ 17032 ChimerSeq STARFusion TCGA_RNA-Seq HPGD-GUCY1A3 HPGD chr4 175443095 - GUCY1A3 chr4 156629388 + Exonic hg19 BLCA TCGA-K4-A3WU-01B 5 47 Out-of-frame Intra-chr q34.1 Tumor suppressor gene q32.1 Seq+ 17033 ChimerSeq STARFusion TCGA_RNA-Seq PICALM-SYTL2 PICALM chr11 85779693 - SYTL2 chr11 85456815 - Exonic hg19 BLCA TCGA-K4-A3WU-01B 4 24 In-Frame Intra-chr q14.2 q14.1 17034 ChimerSeq STARFusion TCGA_RNA-Seq DHRS2-GSTM2 DHRS2 chr14 24105981 + GSTM2 chr1 110213909 + Exonic hg19 BLCA TCGA-K4-A3WU-01B 5 15 5'UTR-CDS Inter-chr q11.2 p13.3 17035 ChimerSeq STARFusion TCGA_RNA-Seq PICALM-SYTL2 PICALM chr11 85779693 - SYTL2 chr11 85448699 - Exonic hg19 BLCA TCGA-K4-A3WU-01B 2 24 Out-of-frame Intra-chr q14.2 q14.1 17036 ChimerSeq STARFusion TCGA_RNA-Seq FANCD2-CIDECP FANCD2 chr3 10070405 + CIDECP chr3 10059755 - Exonic hg19 BLCA TCGA-K4-A3WU-01B 3 16 CDS-3'UTR Intra-chr p25.3 Oncogene p25.3 Seq+ 17037 ChimerSeq STARFusion TCGA_RNA-Seq ST6GALNAC2-BRIP1 ST6GALNAC2 chr17 74574838 - BRIP1 chr17 59820495 - Exonic hg19 BLCA TCGA-K4-A3WU-01B 3 7 Out-of-frame Intra-chr q25.1 q23.2 Oncogene Seq+ 17038 ChimerSeq STARFusion TCGA_RNA-Seq FSTL4-SLC22A4 FSTL4 chr5 132902877 - SLC22A4 chr5 131679453 + Exonic hg19 BLCA TCGA-K4-A3WU-01B 3 4 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 17039 ChimerSeq STARFusion TCGA_RNA-Seq TOP3A-ZCCHC8 TOP3A chr17 18198017 - ZCCHC8 chr12 122977336 - Exonic hg19 BLCA TCGA-K4-A3WU-01B 3 4 In-Frame Inter-chr q24.31 Seq+ 17040 ChimerSeq STARFusion TCGA_RNA-Seq HMGXB3-PPARGC1B HMGXB3 chr5 149412166 + PPARGC1B chr5 149227021 + Exonic hg19 BLCA TCGA-K4-A3WU-01B 2 6 Out-of-frame Intra-chr q32 q32 Seq+ 17041 ChimerSeq STARFusion TCGA_RNA-Seq TTLL5-IFT43 TTLL5 chr14 76368567 + IFT43 chr14 76488670 + Exonic hg19 BLCA TCGA-K4-A3WU-01B 2 5 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 17042 ChimerSeq STARFusion TCGA_RNA-Seq BRK1-CD7 BRK1 chr3 10157503 + CD7 chr17 80274857 - Exonic hg19 BLCA TCGA-K4-A3WU-01B 3 0 In-Frame Inter-chr p25.3 q25.3 17043 ChimerSeq STARFusion TCGA_RNA-Seq CELF1-SPI1 CELF1 chr11 47574544 - SPI1 chr11 47381591 - Exonic hg19 BLCA TCGA-BT-A20Q-01A 36 167 5'UTR-CDS Intra-chr p11.2 p11.2 Tumor suppressor gene Transcription factor Seq+ 17044 ChimerSeq STARFusion TCGA_RNA-Seq EPN2-KCNJ12 EPN2 chr17 19140844 + KCNJ12 chr17 21311831 + Exonic hg19 BLCA TCGA-BT-A20Q-01A 7 52 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 17045 ChimerSeq STARFusion TCGA_RNA-Seq EPN2-KCNJ18 EPN2 chr17 19140844 + KCNJ18 chr17 21311831 + Exonic hg19 BLCA TCGA-BT-A20Q-01A 7 52 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 17046 ChimerSeq STARFusion TCGA_RNA-Seq KDM6A-KAL1 KDM6A chrX 44945224 + KAL1 chrX 8591711 - Exonic hg19 BLCA TCGA-BT-A20Q-01A 3 6 Out-of-frame Intra-chr p11.3 Oncogene Tumor suppressor gene Seq+ 17047 ChimerSeq STARFusion TCGA_RNA-Seq GNB5-BNIP2 GNB5 chr15 52439656 - BNIP2 chr15 59956319 - Exonic hg19 BLCA TCGA-BT-A42F-01A 2 11 In-Frame Intra-chr q21.2 q22.2 Seq+ 17048 ChimerSeq STARFusion TCGA_RNA-Seq FOXO3-LOC153910 FOXO3 chr6 108883032 + LOC153910 chr6 142849520 - Exonic hg19 BLCA TCGA-BT-A42F-01A 2 5 CDS-3'UTR Intra-chr q21 Oncogene Tumor suppressor gene Transcription factor 17049 ChimerSeq STARFusion TCGA_RNA-Seq JARID2-CDKAL1 JARID2 chr6 15410596 + CDKAL1 chr6 20649524 + Exonic hg19 BLCA TCGA-KQ-A41R-01A 6 15 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 17050 ChimerSeq STARFusion TCGA_RNA-Seq DHRS4L2-RNF31 DHRS4L2 chr14 24464342 + RNF31 chr14 24626499 + Exonic hg19 BLCA TCGA-KQ-A41R-01A 2 4 In-Frame Intra-chr q11.2 q12 Seq+ 17051 ChimerSeq STARFusion TCGA_RNA-Seq ZNF788-RAD23A ZNF788 chr19 12203285 + RAD23A chr19 13063503 + Exonic hg19 BLCA TCGA-KQ-A41R-01A 2 3 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.13 Seq+ 17052 ChimerSeq STARFusion TCGA_RNA-Seq DEK-KIF25 DEK chr6 18264074 - KIF25 chr6 168431453 + Exonic hg19 BLCA TCGA-GV-A40E-01A 13 54 Out-of-frame Intra-chr p22.3 Oncogene q27 Seq+ 17053 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-TRIOBP MYH9 chr22 36701976 - TRIOBP chr22 38147779 + Exonic hg19 BLCA TCGA-GV-A40E-01A 11 60 Out-of-frame Intra-chr q12.3 Oncogene Tumor suppressor gene q13.1 Seq+ 17054 ChimerSeq STARFusion TCGA_RNA-Seq DEK-KIF25 DEK chr6 18264074 - KIF25 chr6 168430172 + Exonic hg19 BLCA TCGA-GV-A40E-01A 3 54 CDS-5'UTR Intra-chr p22.3 Oncogene q27 Seq+ 17055 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-EFNA1 PVT1 chr8 128903244 + EFNA1 chr1 155103815 + Exonic hg19 BLCA TCGA-GV-A40E-01A 11 22 5'UTR-CDS Inter-chr q24.21 q22 Seq+ 17056 ChimerSeq STARFusion TCGA_RNA-Seq MGAT5B-CYP11A1 MGAT5B chr17 74878380 + CYP11A1 chr15 74640396 - Exonic hg19 BLCA TCGA-GV-A40E-01A 8 13 In-Frame Inter-chr q25.2 q24.1 Seq+ 17057 ChimerSeq STARFusion TCGA_RNA-Seq MED24-KRT40 MED24 chr17 38209551 - KRT40 chr17 39134548 - Exonic hg19 BLCA TCGA-GV-A40E-01A 2 35 Out-of-frame Intra-chr q21.1 Seq+ 17058 ChimerSeq STARFusion TCGA_RNA-Seq EHBP1-COMMD1 EHBP1 chr2 62998527 + COMMD1 chr2 62227836 + Exonic hg19 BLCA TCGA-GV-A40E-01A 2 22 In-Frame Intra-chr p15 p15 Seq+ 17059 ChimerSeq STARFusion TCGA_RNA-Seq NHSL1-SLCO2B1 NHSL1 chr6 138763120 - SLCO2B1 chr11 74873700 + Exonic hg19 BLCA TCGA-GV-A40E-01A 3 10 In-Frame Inter-chr q24.1 q13.4 Seq+ 17060 ChimerSeq STARFusion TCGA_RNA-Seq XPO4-LOC100507412 XPO4 chr13 21476809 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BLCA TCGA-GV-A40E-01A 2 9 CDS-5'UTR Inter-chr q12.11 17061 ChimerSeq STARFusion TCGA_RNA-Seq MBOAT1-TSG101 MBOAT1 chr6 20109829 - TSG101 chr11 18503416 - Exonic hg19 BLCA TCGA-GV-A40E-01A 2 7 Out-of-frame Inter-chr p22.3 p15.1 Tumor suppressor gene 17062 ChimerSeq STARFusion TCGA_RNA-Seq GALNT18-BECN1 GALNT18 chr11 11454168 - BECN1 chr17 40975897 - Exonic hg19 BLCA TCGA-GV-A40E-01A 2 3 Out-of-frame Inter-chr p15.4 q21.31 Tumor suppressor gene Seq+ 17063 ChimerSeq STARFusion TCGA_RNA-Seq CCBP2-KRBOX1 CCBP2 chr3 42861203 + KRBOX1 chr3 42980342 + Exonic hg19 BLCA TCGA-GV-A40E-01A 2 1 5'UTR-5'UTR Intra-chr p22.1 Seq+ 17064 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D8B-RNF128 TBC1D8B chrX 106046213 + RNF128 chrX 106038810 + Exonic hg19 BLCA TCGA-C4-A0F6-01A 5 13 In-Frame Intra-chr q22.3 q22.3 Seq+ 17065 ChimerSeq STARFusion TCGA_RNA-Seq PROSC-ENO1 PROSC chr8 37623873 + ENO1 chr1 8925541 - Exonic hg19 BLCA TCGA-FT-A61P-01A 3 1 In-Frame Inter-chr p36.23 Seq+ 17066 ChimerSeq STARFusion TCGA_RNA-Seq HDDC2-TPD52L1 HDDC2 chr6 125621684 - TPD52L1 chr6 125583980 + Exonic hg19 BLCA TCGA-DK-A1A7-01A 25 159 In-Frame Intra-chr q22.31 q22.31 Seq+ 17067 ChimerSeq STARFusion TCGA_RNA-Seq PVRL4-PFDN2 PVRL4 chr1 161059008 - PFDN2 chr1 161072165 - Exonic hg19 BLCA TCGA-DK-A1A7-01A 6 45 Out-of-frame Intra-chr q23.3 Seq+ 17068 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1598-PRDX3 KIAA1598 chr10 118764533 - PRDX3 chr10 120934104 - Exonic hg19 BLCA TCGA-DK-A1A7-01A 3 5 In-Frame Intra-chr q26.11 Seq+ 17069 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-RNA45S5 ACTN4 chr19 39220830 + RNA45S5 chrUn_gl000220 110229 + Exonic hg19 BLCA TCGA-DK-A1A7-01A 3 1 Out-of-frame Inter-chr 17070 ChimerSeq STARFusion TCGA_RNA-Seq KIF27-UBQLN1 KIF27 chr9 86465014 - UBQLN1 chr9 86284242 - Exonic hg19 BLCA TCGA-DK-A1A7-01A 2 4 In-Frame Intra-chr q21.32 q21.32 Seq+ 17071 ChimerSeq STARFusion TCGA_RNA-Seq CFH-CRB1 CFH chr1 196659369 + CRB1 chr1 197297552 + Exonic hg19 BLCA TCGA-FD-A3SP-01A 7 24 In-Frame Intra-chr q31.3 q31.3 Seq+ 17072 ChimerSeq STARFusion TCGA_RNA-Seq RPL5-CCDC18 RPL5 chr1 93300470 + CCDC18 chr1 93657557 + Exonic hg19 BLCA TCGA-FD-A3SP-01A 2 37 In-Frame Intra-chr p22.1 Tumor suppressor gene p22.1 Seq+ 17073 ChimerSeq STARFusion TCGA_RNA-Seq RIMS2-UBR5 RIMS2 chr8 104955154 + UBR5 chr8 103277506 - Exonic hg19 BLCA TCGA-FD-A3SP-01A 4 1 Out-of-frame Intra-chr q22.3 q22.3 Oncogene 17074 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-GALNS ANKRD11 chr16 89556653 - GALNS chr16 88908379 - Exonic hg19 BLCA TCGA-FD-A3SP-01A 3 4 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 17075 ChimerSeq STARFusion TCGA_RNA-Seq CCNY-ANK3 CCNY chr10 35626135 + ANK3 chr10 61874089 - Exonic hg19 BLCA TCGA-FD-A3SP-01A 2 6 Out-of-frame Intra-chr p11.21 q21.2 Seq+ 17076 ChimerSeq STARFusion TCGA_RNA-Seq DIP2C-GDI2 DIP2C chr10 486811 - GDI2 chr10 5842668 - Exonic hg19 BLCA TCGA-FD-A3SP-01A 2 5 Out-of-frame Intra-chr p15.3 p15.1 Seq+ 17077 ChimerSeq STARFusion TCGA_RNA-Seq NXN-VPS53 NXN chr17 722679 - VPS53 chr17 465985 - Exonic hg19 BLCA TCGA-FD-A3SP-01A 2 1 Out-of-frame Intra-chr p13.3 Tumor suppressor gene Seq+ 17078 ChimerSeq STARFusion TCGA_RNA-Seq NDUFA4-PHF14 NDUFA4 chr7 10979643 - PHF14 chr7 11150977 + Exonic hg19 BLCA TCGA-CF-A47V-01A 2 1 CDS-5'UTR Intra-chr p21.3 p21.3 Seq+ 17079 ChimerSeq STARFusion TCGA_RNA-Seq SLBP-ADD1 SLBP chr4 1713601 - ADD1 chr4 2896309 + Exonic hg19 BLCA TCGA-CF-A47V-01A 2 1 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 17080 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D15-PDXDC2P TBC1D15 chr12 72291721 + PDXDC2P chr16 70012185 - Exonic hg19 BLCA TCGA-FD-A3B3-01A 35 3 CDS-3'UTR Inter-chr q21.1 q22.1 17081 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D15-NPIPL3 TBC1D15 chr12 72291721 + NPIPL3 chr16 21418180 - Exonic hg19 BLCA TCGA-FD-A3B3-01A 19 29 In-Frame Inter-chr q21.1 17082 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D15-LOC613037 TBC1D15 chr12 72291721 + LOC613037 chr16 30238690 - Exonic hg19 BLCA TCGA-FD-A3B3-01A 2 46 CDS-3'UTR Inter-chr q21.1 17083 ChimerSeq STARFusion TCGA_RNA-Seq GDI2-ZNF526 GDI2 chr10 5855177 - ZNF526 chr19 42728367 + Exonic hg19 BLCA TCGA-FD-A3B3-01A 4 7 CDS-5'UTR Inter-chr p15.1 q13.2 Transcription factor Seq+ 17084 ChimerSeq STARFusion TCGA_RNA-Seq DHRS4-SCFD1 DHRS4 chr14 24423125 + SCFD1 chr14 31103153 + Exonic hg19 BLCA TCGA-FD-A3B3-01A 2 9 In-Frame Intra-chr q11.2 q12 Seq+ 17085 ChimerSeq STARFusion TCGA_RNA-Seq ARID4A-L3HYPDH ARID4A chr14 58814596 + L3HYPDH chr14 59946069 - Exonic hg19 BLCA TCGA-FD-A3B3-01A 2 6 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 17086 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 BLCA TCGA-E7-A5KE-01A 934 2842 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 17087 ChimerSeq STARFusion TCGA_RNA-Seq ATP5H-HN1 ATP5H chr17 73038276 - HN1 chr17 73142779 - Exonic hg19 BLCA TCGA-E7-A5KE-01A 47 414 In-Frame Intra-chr q25.1 Seq+ 17088 ChimerSeq STARFusion TCGA_RNA-Seq PPARG-SYN2 PPARG chr3 12330633 + SYN2 chr3 12228869 + Exonic hg19 BLCA TCGA-E7-A5KE-01A 27 145 5'UTR-CDS Intra-chr p25.2 Oncogene Tumor suppressor gene Transcription factor p25.2 Seq+ 17089 ChimerSeq STARFusion TCGA_RNA-Seq PPARG-SYN2 PPARG chr3 12329519 + SYN2 chr3 12228869 + Exonic hg19 BLCA TCGA-E7-A5KE-01A 26 145 5'UTR-CDS Intra-chr p25.2 Oncogene Tumor suppressor gene Transcription factor p25.2 Seq+ 17090 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R2-SELO PPP6R2 chr22 50810579 + SELO chr22 50654146 + Exonic hg19 BLCA TCGA-E7-A5KE-01A 23 77 5'UTR-CDS Intra-chr q13.33 Seq+ 17091 ChimerSeq STARFusion TCGA_RNA-Seq SNX31-PABPC1 SNX31 chr8 101608867 - PABPC1 chr8 101725017 - Exonic hg19 BLCA TCGA-E7-A5KE-01A 14 80 In-Frame Intra-chr q22.3 q22.3 Seq+ 17092 ChimerSeq STARFusion TCGA_RNA-Seq CXADR-C21orf37 CXADR chr21 18885490 + C21orf37 chr21 18821183 + Exonic hg19 BLCA TCGA-E7-A5KE-01A 6 82 CDS-5'UTR Intra-chr q21.1 17093 ChimerSeq STARFusion TCGA_RNA-Seq SNX31-PABPC1 SNX31 chr8 101608867 - PABPC1 chr8 101724685 - Exonic hg19 BLCA TCGA-E7-A5KE-01A 3 80 In-Frame Intra-chr q22.3 q22.3 Seq+ 17094 ChimerSeq STARFusion TCGA_RNA-Seq SEMA4C-FAM178B SEMA4C chr2 97535613 - FAM178B chr2 97613639 - Exonic hg19 BLCA TCGA-E7-A5KE-01A 18 16 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 17095 ChimerSeq STARFusion TCGA_RNA-Seq CASC3-SIPA1L3 CASC3 chr17 38297860 + SIPA1L3 chr19 38696737 + Exonic hg19 BLCA TCGA-E7-A5KE-01A 3 33 In-Frame Inter-chr q21.1 q13.13 Seq+ 17096 ChimerSeq STARFusion TCGA_RNA-Seq ACOX1-SRP68 ACOX1 chr17 73949532 - SRP68 chr17 74046607 - Exonic hg19 BLCA TCGA-E7-A5KE-01A 4 24 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 17097 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D8-CREG2 TBC1D8 chr2 101706716 - CREG2 chr2 101971828 - Exonic hg19 BLCA TCGA-E7-A5KE-01A 4 23 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 17098 ChimerSeq STARFusion TCGA_RNA-Seq RPAP3-HDAC7 RPAP3 chr12 48095247 - HDAC7 chr12 48196057 - Exonic hg19 BLCA TCGA-E7-A5KE-01A 2 19 Out-of-frame Intra-chr q13.11 q13.11 Seq+ 17099 ChimerSeq STARFusion TCGA_RNA-Seq AMBRA1-CKAP5 AMBRA1 chr11 46615378 - CKAP5 chr11 46806223 - Exonic hg19 BLCA TCGA-E7-A5KE-01A 3 11 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 17100 ChimerSeq STARFusion TCGA_RNA-Seq LLGL2-EXOC7 LLGL2 chr17 73521906 + EXOC7 chr17 74083801 - Exonic hg19 BLCA TCGA-E7-A5KE-01A 3 7 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 17101 ChimerSeq STARFusion TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105614953 - OBFC1 chr10 105670380 - Exonic hg19 BLCA TCGA-E7-A5KE-01A 2 9 Out-of-frame Intra-chr q24.33 Seq+ 17102 ChimerSeq STARFusion TCGA_RNA-Seq SAE1-TGFBR3 SAE1 chr19 47646862 + TGFBR3 chr1 92163687 - Exonic hg19 BLCA TCGA-E7-A5KE-01A 2 2 Out-of-frame Inter-chr q13.32 p22.1 Tumor suppressor gene 17103 ChimerSeq STARFusion TCGA_RNA-Seq VGLL4-UPF2 VGLL4 chr3 11744445 - UPF2 chr10 12021164 - Exonic hg19 BLCA TCGA-XF-A8HD-01A 101 374 Out-of-frame Inter-chr p25.2 p14 Seq+ 17104 ChimerSeq STARFusion TCGA_RNA-Seq VGLL4-UPF2 VGLL4 chr3 11744445 - UPF2 chr10 12009453 - Exonic hg19 BLCA TCGA-XF-A8HD-01A 64 374 Out-of-frame Inter-chr p25.2 p14 Seq+ 17105 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD26-MCM10 ANKRD26 chr10 27389014 - MCM10 chr10 13251091 + Exonic hg19 BLCA TCGA-XF-A8HD-01A 6 24 In-Frame Intra-chr p12.1 p13 Seq+ 17106 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-ATP9A EPB41L1 chr20 34713449 + ATP9A chr20 50346517 - Exonic hg19 BLCA TCGA-XF-A8HD-01A 3 14 Out-of-frame Intra-chr q11.23 q13.2 Seq+ 17107 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-ATP9A EPB41L1 chr20 34700402 + ATP9A chr20 50346517 - Exonic hg19 BLCA TCGA-XF-A8HD-01A 3 14 5'UTR-CDS Intra-chr q11.23 q13.2 Seq+ 17108 ChimerSeq STARFusion TCGA_RNA-Seq SETD4-LINC00159 SETD4 chr21 37432645 - LINC00159 chr21 33458608 - Exonic hg19 BLCA TCGA-XF-A8HD-01A 3 14 5'UTR-5'UTR Intra-chr q22.12 q22.11 17109 ChimerSeq STARFusion TCGA_RNA-Seq FAM208B-AKR1E2 FAM208B chr10 5727138 + AKR1E2 chr10 4872867 + Exonic hg19 BLCA TCGA-XF-A8HD-01A 4 5 5'UTR-CDS Intra-chr p15.1 p15.1 Seq+ 17110 ChimerSeq STARFusion TCGA_RNA-Seq NEBL-CAMK1D NEBL chr10 21461312 - CAMK1D chr10 12595224 + Exonic hg19 BLCA TCGA-XF-A8HD-01A 3 5 In-Frame Intra-chr p12.31 p13 Seq+ 17111 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 BLCA TCGA-CF-A47T-01A 4 6 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 17112 ChimerSeq STARFusion TCGA_RNA-Seq LMBR1-LINC01006 LMBR1 chr7 156549087 - LINC01006 chr7 156265405 - Exonic hg19 BLCA TCGA-DK-AA76 5 27 Out-of-frame Intra-chr q36.3 q36.3 17113 ChimerSeq STARFusion TCGA_RNA-Seq ACVR2A-MBD5 ACVR2A chr2 148602776 + MBD5 chr2 149240679 + Exonic hg19 BLCA TCGA-DK-AA76 5 22 In-Frame Intra-chr q22.3 Oncogene q23.1 Seq+ 17114 ChimerSeq STARFusion TCGA_RNA-Seq LCOR-MAP2K6 LCOR chr10 98667504 + MAP2K6 chr17 67521042 + Exonic hg19 BLCA TCGA-DK-AA76 4 19 5'UTR-CDS Inter-chr q24.1 Transcription factor q24.3 STE:STE7 Seq+ 17115 ChimerSeq STARFusion TCGA_RNA-Seq PDE9A-PKNOX1 PDE9A chr21 44073993 + PKNOX1 chr21 44424436 + Exonic hg19 BLCA TCGA-DK-AA76 5 12 5'UTR-5'UTR Intra-chr q22.3 q22.3 Tumor suppressor gene Transcription factor 17116 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-SMARCA4 DNM2 chr19 10829079 + SMARCA4 chr19 11094800 + Exonic hg19 BLCA TCGA-DK-AA76 3 13 CDS-5'UTR Intra-chr p13.2 p13.2 Oncogene Tumor suppressor gene Seq+ 17117 ChimerSeq STARFusion TCGA_RNA-Seq ARPP19-MYO5A ARPP19 chr15 52861045 - MYO5A chr15 52606400 - Exonic hg19 BLCA TCGA-DK-AA76 3 9 In-Frame Intra-chr q21.2 q21.2 Seq+ 17118 ChimerSeq STARFusion TCGA_RNA-Seq MOCOS-FHOD3 MOCOS chr18 33800180 + FHOD3 chr18 33952643 + Exonic hg19 BLCA TCGA-DK-AA76 2 3 Out-of-frame Intra-chr q12.2 q12.2 17119 ChimerSeq STARFusion TCGA_RNA-Seq KRT7-OR7E47P KRT7 chr12 52636921 + OR7E47P chr12 52501163 + Exonic hg19 BLCA TCGA-DK-AA76 2 0 Out-of-frame Intra-chr q13.13 q13.13 17120 ChimerSeq STARFusion TCGA_RNA-Seq KCNMB4-MSRB3 KCNMB4 chr12 70760850 + MSRB3 chr12 65881784 + Exonic hg19 BLCA TCGA-DK-AA75 11 131 CDS-3'UTR Intra-chr q15 q14.3 Seq+ 17121 ChimerSeq STARFusion TCGA_RNA-Seq KCNMB4-MSRB3 KCNMB4 chr12 70760850 + MSRB3 chr12 65869185 + Exonic hg19 BLCA TCGA-DK-AA75 10 129 CDS-3'UTR Intra-chr q15 q14.3 Seq+ 17122 ChimerSeq STARFusion TCGA_RNA-Seq CCT2-CPM CCT2 chr12 69980124 + CPM chr12 69236109 - Exonic hg19 BLCA TCGA-DK-AA75 2 31 CDS-3'UTR Intra-chr q15 q15 Seq+ 17123 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-RAP1B FRS2 chr12 69864310 + RAP1B chr12 69042479 + Exonic hg19 BLCA TCGA-DK-AA75 5 15 5'UTR-5'UTR Intra-chr q15 q15 17124 ChimerSeq STARFusion TCGA_RNA-Seq PPARG-SYN2 PPARG chr3 12330633 + SYN2 chr3 12187179 + Exonic hg19 BLCA TCGA-DK-AA75 4 15 5'UTR-CDS Intra-chr p25.2 Oncogene Tumor suppressor gene Transcription factor p25.2 Seq+ 17125 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-RAP1B FRS2 chr12 69864310 + RAP1B chr12 69042486 + Exonic hg19 BLCA TCGA-DK-AA75 2 15 5'UTR-5'UTR Intra-chr q15 q15 17126 ChimerSeq STARFusion TCGA_RNA-Seq PPARG-SYN2 PPARG chr3 12329519 + SYN2 chr3 12187179 + Exonic hg19 BLCA TCGA-DK-AA75 2 15 5'UTR-CDS Intra-chr p25.2 Oncogene Tumor suppressor gene Transcription factor p25.2 Seq+ 17127 ChimerSeq STARFusion TCGA_RNA-Seq XPR1-DEDD XPR1 chr1 180651547 + DEDD chr1 161094316 - Exonic hg19 BLCA TCGA-DK-AA75 4 6 CDS-5'UTR Intra-chr q25.3 q23.3 Seq+ 17128 ChimerSeq STARFusion TCGA_RNA-Seq FOSL1-HN1 FOSL1 chr11 65667712 - HN1 chr17 73132345 - Exonic hg19 BLCA TCGA-DK-AA75 3 8 In-Frame Inter-chr q13.1 Transcription factor Seq+ 17129 ChimerSeq STARFusion TCGA_RNA-Seq CDKAL1-MSRB3 CDKAL1 chr6 21108694 + MSRB3 chr12 65881784 + Exonic hg19 BLCA TCGA-DK-AA75 2 6 CDS-3'UTR Inter-chr p22.3 q14.3 Seq+ 17130 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-BAGE2 CPSF6 chr12 69656342 + BAGE2 chr21 11058323 - Exonic hg19 BLCA TCGA-DK-AA75 3 2 3'UTR-CDS Inter-chr q15 p11.2 17131 ChimerSeq STARFusion TCGA_RNA-Seq TMEM135-FGD5 TMEM135 chr11 86947726 + FGD5 chr3 14922079 + Exonic hg19 BLCA TCGA-DK-AA75 2 3 Out-of-frame Inter-chr q14.2 p25.1 Seq+ 17132 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-CCNL2 CPSF6 chr12 69656342 + CCNL2 chr1 1326245 - Exonic hg19 BLCA TCGA-DK-AA75 2 2 3'UTR-CDS Inter-chr q15 p36.33 Seq+ 17133 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57737949 + VMP1 chr17 57915656 + Exonic hg19 BLCA TCGA-DK-AA74 2 3 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 17134 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-PPP1R1B ERBB2 chr17 37866734 + PPP1R1B chr17 37790136 + Exonic hg19 BLCA TCGA-DK-A1A3-01A 11 25 In-Frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 17135 ChimerSeq STARFusion TCGA_RNA-Seq CEBPG-TDRD12 CEBPG chr19 33864801 + TDRD12 chr19 33239382 + Exonic hg19 BLCA TCGA-DK-A1A3-01A 8 16 5'UTR-CDS Intra-chr q13.11 Transcription factor q13.11 Seq+ 17136 ChimerSeq STARFusion TCGA_RNA-Seq ZNF420-LOC100507412 ZNF420 chr19 37582023 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BLCA TCGA-DK-A1A3-01A 2 16 CDS-5'UTR Inter-chr q13.12 Transcription factor 17137 ChimerSeq STARFusion TCGA_RNA-Seq ERRFI1-LUZP1 ERRFI1 chr1 8086218 - LUZP1 chr1 23435620 - Exonic hg19 BLCA TCGA-DK-A1A3-01A 2 6 5'UTR-5'UTR Intra-chr p36.23 Tumor suppressor gene p36.12 Seq+ 17138 ChimerSeq STARFusion TCGA_RNA-Seq ANXA8L2-LINC00842 ANXA8L2 chr10 47747132 + LINC00842 chr10 47099714 - Exonic hg19 BLCA TCGA-DK-A1AA-01A 2 1 Out-of-frame Intra-chr 17139 ChimerSeq STARFusion TCGA_RNA-Seq KLHL18-HEMK1 KLHL18 chr3 47324584 + HEMK1 chr3 50608362 + Exonic hg19 BLCA TCGA-DK-A3IQ-01A 2 8 CDS-5'UTR Intra-chr p21.31 p21.31 Seq+ 17140 ChimerSeq STARFusion TCGA_RNA-Seq EPS8-PIK3C2G EPS8 chr12 15942095 - PIK3C2G chr12 18641383 + Exonic hg19 BLCA TCGA-DK-A3IQ-01A 2 5 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 17141 ChimerSeq STARFusion TCGA_RNA-Seq KANK1-NFX1 KANK1 chr9 707247 + NFX1 chr9 33338508 + Exonic hg19 BLCA TCGA-DK-A3IQ-01A 2 4 5'UTR-CDS Intra-chr p24.3 Tumor suppressor gene p13.3 Transcription factor Seq+ 17142 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-NSF KANSL1 chr17 44144915 - NSF chr17 44827139 + Exonic hg19 BLCA TCGA-DK-A3IQ-01A 2 1 Out-of-frame Intra-chr 17143 ChimerSeq STARFusion TCGA_RNA-Seq NUP153-DTNBP1 NUP153 chr6 17646298 - DTNBP1 chr6 15524900 - Exonic hg19 BLCA TCGA-PQ-A6FI-01A 76 619 In-Frame Intra-chr p22.3 p22.3 Seq+ 17144 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992064 + VMP1 chr17 57915656 + Exonic hg19 BLCA TCGA-PQ-A6FI-01A 61 217 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 17145 ChimerSeq STARFusion TCGA_RNA-Seq CLCN3-TDO2 CLCN3 chr4 170601358 + TDO2 chr4 156838547 + Exonic hg19 BLCA TCGA-PQ-A6FI-01A 11 23 Out-of-frame Intra-chr q33 q32.1 Seq+ 17146 ChimerSeq STARFusion TCGA_RNA-Seq SEC14L4-SIAH1 SEC14L4 chr22 30899664 - SIAH1 chr16 48437578 - Exonic hg19 BLCA TCGA-4Z-AA80 6 13 CDS-5'UTR Inter-chr q12.2 q12.1 Tumor suppressor gene Seq+ 17147 ChimerSeq STARFusion TCGA_RNA-Seq KIF13A-KDM1B KIF13A chr6 17987285 - KDM1B chr6 18166498 + Exonic hg19 BLCA TCGA-4Z-AA80 4 12 In-Frame Intra-chr p22.3 p22.3 Seq+ 17148 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-CYB5B NFAT5 chr16 69600277 + CYB5B chr16 69481053 + Exonic hg19 BLCA TCGA-4Z-AA80 4 12 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 17149 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-CYB5B NFAT5 chr16 69602451 + CYB5B chr16 69481053 + Exonic hg19 BLCA TCGA-4Z-AA80 2 12 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 17150 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-DYNC2H1 PPFIA1 chr11 70118542 + DYNC2H1 chr11 102984266 + Exonic hg19 BLCA TCGA-4Z-AA80 2 10 In-Frame Intra-chr q13.3 q22.3 Seq+ 17151 ChimerSeq STARFusion TCGA_RNA-Seq MED13L-TAOK3 MED13L chr12 116549233 - TAOK3 chr12 118651915 - Exonic hg19 BLCA TCGA-4Z-AA82 9 41 Out-of-frame Intra-chr q24.21 q24.23 Seq+ 17152 ChimerSeq STARFusion TCGA_RNA-Seq MED13L-TAOK3 MED13L chr12 116675273 - TAOK3 chr12 118651915 - Exonic hg19 BLCA TCGA-4Z-AA82 2 40 In-Frame Intra-chr q24.21 q24.23 Seq+ 17153 ChimerSeq STARFusion TCGA_RNA-Seq KLHDC4-SLC7A5 KLHDC4 chr16 87782279 - SLC7A5 chr16 87871547 - Exonic hg19 BLCA TCGA-4Z-AA82 5 23 In-Frame Intra-chr q24.2 q24.2 Seq+ 17154 ChimerSeq STARFusion TCGA_RNA-Seq RANBP17-TLX3 RANBP17 chr5 170289055 + TLX3 chr5 170737154 + Exonic hg19 BLCA TCGA-4Z-AA82 4 3 Out-of-frame Intra-chr q35.1 q35.1 Transcription factor Seq+ 17155 ChimerSeq STARFusion TCGA_RNA-Seq SKA2-RTTN SKA2 chr17 57196680 - RTTN chr18 67673720 - Exonic hg19 BLCA TCGA-4Z-AA82 2 10 Out-of-frame Inter-chr q22 q22.2 17156 ChimerSeq STARFusion TCGA_RNA-Seq EP300-HAUS8 EP300 chr22 41513825 + HAUS8 chr19 17166812 - Exonic hg19 BLCA TCGA-4Z-AA84 8 44 In-Frame Inter-chr q13.2 Oncogene p13.11 Seq+ 17157 ChimerSeq STARFusion TCGA_RNA-Seq FAF1-ITGB3BP FAF1 chr1 51267303 - ITGB3BP chr1 63974241 - Exonic hg19 BLCA TCGA-4Z-AA84 6 37 In-Frame Intra-chr p32.3 p31.3 Seq+ 17158 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890979 - BCAR4 chr16 11914322 - Exonic hg19 BLCA TCGA-4Z-AA84 10 8 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 17159 ChimerSeq STARFusion TCGA_RNA-Seq IQCK-BCAR4 IQCK chr16 19745150 + BCAR4 chr16 11914322 - Exonic hg19 BLCA TCGA-4Z-AA84 7 16 Out-of-frame Intra-chr p12.3 p13.13 Seq+ 17160 ChimerSeq STARFusion TCGA_RNA-Seq CEP170-UBE2Q1 CEP170 chr1 243418342 - UBE2Q1 chr1 154528440 - Exonic hg19 BLCA TCGA-4Z-AA84 6 19 5'UTR-CDS Intra-chr q21.3 Seq+ 17161 ChimerSeq STARFusion TCGA_RNA-Seq ROCK1-FABP2 ROCK1 chr18 18690779 - FABP2 chr4 120241997 - Exonic hg19 BLCA TCGA-4Z-AA84 7 10 Out-of-frame Inter-chr q11.1 AGC:DMPK q26 Seq+ 17162 ChimerSeq STARFusion TCGA_RNA-Seq ZW10-UPK2 ZW10 chr11 113639555 - UPK2 chr11 118828308 + Exonic hg19 BLCA TCGA-4Z-AA84 6 9 Out-of-frame Intra-chr q23.2 q23.3 Seq+ 17163 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP1-AMBRA1 ARHGAP1 chr11 46717210 - AMBRA1 chr11 46439602 - Exonic hg19 BLCA TCGA-4Z-AA84 5 8 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 17164 ChimerSeq STARFusion TCGA_RNA-Seq FAM91A1-ANXA13 FAM91A1 chr8 124787538 + ANXA13 chr8 124724993 - Exonic hg19 BLCA TCGA-4Z-AA84 4 12 In-Frame Intra-chr q24.13 q24.13 Seq+ 17165 ChimerSeq STARFusion TCGA_RNA-Seq MVP-SEZ6L2 MVP chr16 29831831 + SEZ6L2 chr16 29900046 - Exonic hg19 BLCA TCGA-4Z-AA84 6 4 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 17166 ChimerSeq STARFusion TCGA_RNA-Seq SRP68-XIRP2 SRP68 chr17 74053484 - XIRP2 chr2 168067245 + Exonic hg19 BLCA TCGA-4Z-AA84 2 17 Out-of-frame Inter-chr q25.1 q24.3 Seq+ 17167 ChimerSeq STARFusion TCGA_RNA-Seq DKFZP761J1410-CCDC159 DKFZP761J1410 chr19 11472164 + CCDC159 chr19 11465256 + Exonic hg19 BLCA TCGA-4Z-AA84 3 10 Out-of-frame Intra-chr p13.2 17168 ChimerSeq STARFusion TCGA_RNA-Seq PFKP-CAMK2G PFKP chr10 3159038 + CAMK2G chr10 75620647 - Exonic hg19 BLCA TCGA-4Z-AA84 4 6 Out-of-frame Intra-chr p15.2 q22.2 Seq+ 17169 ChimerSeq STARFusion TCGA_RNA-Seq GANC-RORA GANC chr15 42618622 + RORA chr15 60789818 - Exonic hg19 BLCA TCGA-4Z-AA84 4 5 Out-of-frame Intra-chr q15.1 q22.2 Transcription factor Seq+ 17170 ChimerSeq STARFusion TCGA_RNA-Seq FAM91A1-ANXA13 FAM91A1 chr8 124787538 + ANXA13 chr8 124748117 - Exonic hg19 BLCA TCGA-4Z-AA84 2 12 In-Frame Intra-chr q24.13 q24.13 Seq+ 17171 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5P1-ZNF689 SLC7A5P1 chr16 29624424 - ZNF689 chr16 30635190 - Exonic hg19 BLCA TCGA-4Z-AA84 3 6 3'UTR-5'UTR Intra-chr p11.2 p11.2 Transcription factor 17172 ChimerSeq STARFusion TCGA_RNA-Seq ZNF700-TOX ZNF700 chr19 12036088 + TOX chr8 59852103 - Exonic hg19 BLCA TCGA-4Z-AA84 2 7 In-Frame Inter-chr p13.2 Transcription factor q12.1 Seq+ 17173 ChimerSeq STARFusion TCGA_RNA-Seq ZNF763-TOX ZNF763 chr19 12036088 + TOX chr8 59852103 - Exonic hg19 BLCA TCGA-4Z-AA84 2 7 5'UTR-CDS Inter-chr p13.2 Transcription factor q12.1 17174 ChimerSeq STARFusion TCGA_RNA-Seq ZNF763-TOX ZNF763 chr19 12036088 + TOX chr8 59852103 - Exonic hg19 BLCA TCGA-4Z-AA84 2 7 5'UTR-CDS Inter-chr p13.2 Transcription factor q12.1 17175 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-CCDC146 PTPN12 chr7 77166962 + CCDC146 chr7 76903011 + Exonic hg19 BLCA TCGA-4Z-AA87 12 110 In-Frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 17176 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-CCDC146 PTPN12 chr7 77168162 + CCDC146 chr7 76903011 + Exonic hg19 BLCA TCGA-4Z-AA87 3 110 5'UTR-CDS Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 17177 ChimerSeq STARFusion TCGA_RNA-Seq GPR56-GINS3 GPR56 chr16 57653793 + GINS3 chr16 58420525 + Exonic hg19 BLCA TCGA-4Z-AA87 10 30 Out-of-frame Intra-chr q21 q21 17178 ChimerSeq STARFusion TCGA_RNA-Seq AFF1-PTPN13 AFF1 chr4 87869723 + PTPN13 chr4 87718027 + Exonic hg19 BLCA TCGA-4Z-AA87 8 37 Out-of-frame Intra-chr q21.3 Oncogene q21.3 Tumor suppressor gene Seq+ 17179 ChimerSeq STARFusion TCGA_RNA-Seq LUC7L-SLC27A5 LUC7L chr16 270648 - SLC27A5 chr19 59012777 - Exonic hg19 BLCA TCGA-4Z-AA87 7 13 Out-of-frame Inter-chr p13.3 q13.43 Seq+ 17180 ChimerSeq STARFusion TCGA_RNA-Seq RAB3GAP2-BPNT1 RAB3GAP2 chr1 220379249 - BPNT1 chr1 220253196 - Exonic hg19 BLCA TCGA-4Z-AA87 4 8 CDS-5'UTR Intra-chr q41 q41 Seq+ 17181 ChimerSeq STARFusion TCGA_RNA-Seq ASH1L-GON4L ASH1L chr1 155531944 - GON4L chr1 155730432 - Exonic hg19 BLCA TCGA-4Z-AA87 2 8 5'UTR-CDS Intra-chr q22 Transcription factor q22 Seq+ 17182 ChimerSeq STARFusion TCGA_RNA-Seq MEGF9-PSMD5 MEGF9 chr9 123476036 - PSMD5 chr9 123583257 - Exonic hg19 BLCA TCGA-4Z-AA87 2 4 Out-of-frame Intra-chr q33.2 q33.2 Seq+ 17183 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-CDK11A GNB1 chr1 1822259 - CDK11A chr1 1636464 - Exonic hg19 BLCA TCGA-4Z-AA87 2 3 5'UTR-CDS Intra-chr p36.33 p36.33 Seq+ 17184 ChimerSeq STARFusion TCGA_RNA-Seq STK24-SLC15A1 STK24 chr13 99228999 - SLC15A1 chr13 99379113 - Exonic hg19 BLCA TCGA-4Z-AA87 2 3 Out-of-frame Intra-chr q32.2 q32.3 Seq+ 17185 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125718 - CXCL16 chr17 4637332 - Exonic hg19 BLCA TCGA-4Z-AA86 5 6 Out-of-frame Inter-chr q12.2 p13.2 17186 ChimerSeq STARFusion TCGA_RNA-Seq RANBP3-ANKRD24 RANBP3 chr19 5978072 - ANKRD24 chr19 4199872 + Exonic hg19 BLCA TCGA-4Z-AA86 2 5 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 17187 ChimerSeq STARFusion TCGA_RNA-Seq PRKCA-NF1 PRKCA chr17 64302245 + NF1 chr17 29652838 + Exonic hg19 BLCA TCGA-4Z-AA86 2 2 Out-of-frame Intra-chr q24.2 q11.2 Oncogene Tumor suppressor gene Seq+ 17188 ChimerSeq STARFusion TCGA_RNA-Seq RPL3-KRT13 RPL3 chr22 39713466 - KRT13 chr17 39657614 - Exonic hg19 BLCA TCGA-E7-A519-01A 2 1 In-Frame Inter-chr q13.1 q21.2 17189 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983374 - RSRC2 chr12 122990253 - Exonic hg19 BLCA TCGA-BL-A3JM-01A 74 301 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 17190 ChimerSeq STARFusion TCGA_RNA-Seq UBL3-CKAP2 UBL3 chr13 30423649 - CKAP2 chr13 53030658 + Exonic hg19 BLCA TCGA-BL-A3JM-01A 51 103 Out-of-frame Intra-chr q12.3 q14.3 Seq+ 17191 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC1-DOCK3 SMARCC1 chr3 47814307 - DOCK3 chr3 50927457 + Exonic hg19 BLCA TCGA-BL-A3JM-01A 7 12 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.2 Seq+ 17192 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 BLCA TCGA-CF-A3MH-01A 1684 3478 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 17193 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA7-SERGEF PLEKHA7 chr11 17035536 - SERGEF chr11 17809960 - Exonic hg19 BLCA TCGA-CF-A3MH-01A 10 33 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 17194 ChimerSeq STARFusion TCGA_RNA-Seq EIF3C-MAZ EIF3C chr16 28700149 + MAZ chr16 29819551 + Exonic hg19 BLCA TCGA-CF-A3MH-01A 2 0 5'UTR-CDS Intra-chr p11.2 p11.2 Transcription factor 17195 ChimerSeq STARFusion TCGA_RNA-Seq EFTUD2-HIGD1B EFTUD2 chr17 42956924 - HIGD1B chr17 42925428 + Exonic hg19 BLCA TCGA-DK-A6B1-01A 7 37 CDS-5'UTR Intra-chr q21.31 q21.31 17196 ChimerSeq STARFusion TCGA_RNA-Seq MRS2-DCDC2 MRS2 chr6 24405469 + DCDC2 chr6 24205330 - Exonic hg19 BLCA TCGA-DK-A6B1-01A 3 37 Out-of-frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 17197 ChimerSeq STARFusion TCGA_RNA-Seq ASH1L-SPRR2G ASH1L chr1 155408118 - SPRR2G chr1 153122607 - Exonic hg19 BLCA TCGA-DK-A6B1-01A 2 5 CDS-5'UTR Intra-chr q22 Transcription factor q21.3 Seq+ 17198 ChimerSeq STARFusion TCGA_RNA-Seq ENTPD4-RAC1 ENTPD4 chr8 23315070 - RAC1 chr7 6439757 + Exonic hg19 BLCA TCGA-DK-A6B1-01A 2 1 5'UTR-CDS Inter-chr p21.3 p22.1 Oncogene 17199 ChimerSeq STARFusion TCGA_RNA-Seq ETFA-TMEM59 ETFA chr15 76523674 - TMEM59 chr1 54509198 - Exonic hg19 BLCA TCGA-DK-A6B1-01A 2 1 In-Frame Inter-chr q24.3 p32.3 17200 ChimerSeq STARFusion TCGA_RNA-Seq BCL11B-MIPOL1 BCL11B chr14 99723808 - MIPOL1 chr14 37688758 + Exonic hg19 BLCA TCGA-C4-A0F7-01A 34 131 CDS-5'UTR Intra-chr q32.2 Oncogene Transcription factor q13.3 Seq+ 17201 ChimerSeq STARFusion TCGA_RNA-Seq BCL11B-MIPOL1 BCL11B chr14 99723808 - MIPOL1 chr14 37681435 + Exonic hg19 BLCA TCGA-C4-A0F7-01A 7 131 CDS-5'UTR Intra-chr q32.2 Oncogene Transcription factor q13.3 Seq+ 17202 ChimerSeq STARFusion TCGA_RNA-Seq PTPN14-NSL1 PTPN14 chr1 214625148 - NSL1 chr1 212912943 - Exonic hg19 BLCA TCGA-C4-A0F7-01A 12 69 In-Frame Intra-chr q41 q32.3 Seq+ 17203 ChimerSeq STARFusion TCGA_RNA-Seq RFX7-LIPC RFX7 chr15 56471468 - LIPC chr15 58830532 + Exonic hg19 BLCA TCGA-C4-A0F7-01A 13 64 Out-of-frame Intra-chr q21.3 Transcription factor q21.3 Seq+ 17204 ChimerSeq STARFusion TCGA_RNA-Seq SLC23A2-LINC00658 SLC23A2 chr20 4951439 - LINC00658 chr20 5426392 - Exonic hg19 BLCA TCGA-C4-A0F7-01A 15 51 Out-of-frame Intra-chr p13 p12.3 17205 ChimerSeq STARFusion TCGA_RNA-Seq ADRBK2-AP1B1 ADRBK2 chr22 26086250 + AP1B1 chr22 29747814 - Exonic hg19 BLCA TCGA-C4-A0F7-01A 11 38 In-Frame Intra-chr q12.2 Seq+ 17206 ChimerSeq STARFusion TCGA_RNA-Seq RFX7-LIPC RFX7 chr15 56535323 - LIPC chr15 58830532 + Exonic hg19 BLCA TCGA-C4-A0F7-01A 3 64 Out-of-frame Intra-chr q21.3 Transcription factor q21.3 Seq+ 17207 ChimerSeq STARFusion TCGA_RNA-Seq TCF12-NCOA3 TCF12 chr15 57213296 + NCOA3 chr20 46211927 + Exonic hg19 BLCA TCGA-C4-A0F7-01A 8 31 CDS-5'UTR Inter-chr q21.3 Oncogene Transcription factor q13.12 Transcription factor Seq+ 17208 ChimerSeq STARFusion TCGA_RNA-Seq AP1B1-ADRBK2 AP1B1 chr22 29750639 - ADRBK2 chr22 26091074 + Exonic hg19 BLCA TCGA-C4-A0F7-01A 6 26 In-Frame Intra-chr q12.2 Seq+ 17209 ChimerSeq STARFusion TCGA_RNA-Seq TCF12-NCOA3 TCF12 chr15 57213296 + NCOA3 chr20 46250973 + Exonic hg19 BLCA TCGA-C4-A0F7-01A 2 31 CDS-5'UTR Inter-chr q21.3 Oncogene Transcription factor q13.12 Transcription factor Seq+ 17210 ChimerSeq STARFusion TCGA_RNA-Seq ICA1-HGF ICA1 chr7 8302070 - HGF chr7 81374436 - Exonic hg19 BLCA TCGA-C4-A0F7-01A 2 8 5'UTR-CDS Intra-chr p21.3 q21.11 Oncogene Seq+ 17211 ChimerSeq STARFusion TCGA_RNA-Seq CEP128-TSHR CEP128 chr14 81227781 - TSHR chr14 81562983 + Exonic hg19 BLCA TCGA-C4-A0F7-01A 2 7 Out-of-frame Intra-chr q31.1 q31.1 Oncogene Seq+ 17212 ChimerSeq STARFusion TCGA_RNA-Seq CNPY2-DHX9 CNPY2 chr12 56708635 - DHX9 chr1 182828175 + Exonic hg19 BLCA TCGA-C4-A0F7-01A 2 0 In-Frame Inter-chr q13.3 q25.3 17213 ChimerSeq STARFusion TCGA_RNA-Seq ITSN2-ESRP1 ITSN2 chr2 24550921 - ESRP1 chr8 95683681 + Exonic hg19 BLCA TCGA-C4-A0F7-01A 2 0 Out-of-frame Inter-chr p23.3 q22.1 Tumor suppressor gene 17214 ChimerSeq STARFusion TCGA_RNA-Seq LIMS1-CCDC138 LIMS1 chr2 109151050 + CCDC138 chr2 109421345 + Exonic hg19 BLCA TCGA-K4-A5RJ-01A 5 22 Out-of-frame Intra-chr q12.3 q13 Seq+ 17215 ChimerSeq STARFusion TCGA_RNA-Seq DENND5A-ST5 DENND5A chr11 9163487 - ST5 chr11 8772272 - Exonic hg19 BLCA TCGA-ZF-AA4W-01A 2 2 CDS-5'UTR Intra-chr p15.4 p15.4 Tumor suppressor gene 17216 ChimerSeq STARFusion TCGA_RNA-Seq LPP-TPRG1 LPP chr3 188327632 + TPRG1 chr3 188925165 + Exonic hg19 BLCA TCGA-ZF-AA4W-01A 2 1 CDS-5'UTR Intra-chr q27.3 Oncogene q28 17217 ChimerSeq STARFusion TCGA_RNA-Seq USP31-RHD USP31 chr16 23113640 - RHD chr1 25611064 + Exonic hg19 BLCA TCGA-ZF-A9RL-01A 18 37 In-Frame Inter-chr p12.2 p36.11 Seq+ 17218 ChimerSeq STARFusion TCGA_RNA-Seq IFT52-MXRA8 IFT52 chr20 42225162 + MXRA8 chr1 1292084 - Exonic hg19 BLCA TCGA-ZF-A9RL-01A 4 7 Out-of-frame Inter-chr q13.12 p36.33 Seq+ 17219 ChimerSeq STARFusion TCGA_RNA-Seq PAG1-KIAA1429 PAG1 chr8 81942231 - KIAA1429 chr8 95527179 - Exonic hg19 BLCA TCGA-ZF-A9RL-01A 2 10 5'UTR-CDS Intra-chr q21.13 q22.1 Seq+ 17220 ChimerSeq STARFusion TCGA_RNA-Seq ZC2HC1A-ANGPT1 ZC2HC1A chr8 79610748 + ANGPT1 chr8 108276579 - Exonic hg19 BLCA TCGA-ZF-A9RL-01A 3 6 In-Frame Intra-chr q21.13 q23.1 Seq+ 17221 ChimerSeq STARFusion TCGA_RNA-Seq SYN2-PPARG SYN2 chr3 12224872 + PPARG chr3 12421203 + Exonic hg19 BLCA TCGA-G2-A2EL-01A 7 30 In-Frame Intra-chr p25.2 p25.2 Oncogene Tumor suppressor gene Transcription factor 17222 ChimerSeq STARFusion TCGA_RNA-Seq SYN2-PPARG SYN2 chr3 12224872 + PPARG chr3 12353879 + Exonic hg19 BLCA TCGA-G2-A2EL-01A 2 30 CDS-5'UTR Intra-chr p25.2 p25.2 Oncogene Tumor suppressor gene Transcription factor 17223 ChimerSeq STARFusion TCGA_RNA-Seq WDR74-SNHG1 WDR74 chr11 62602903 - SNHG1 chr11 62620311 - Exonic hg19 BLCA TCGA-G2-A2EO-01A 35 119 CDS-3'UTR Intra-chr q12.3 q12.3 Seq+ 17224 ChimerSeq STARFusion TCGA_RNA-Seq EXT1-WDYHV1 EXT1 chr8 119122324 - WDYHV1 chr8 124440164 + Exonic hg19 BLCA TCGA-G2-A2EO-01A 14 32 In-Frame Intra-chr q24.11 Oncogene Tumor suppressor gene q24.13 Seq+ 17225 ChimerSeq STARFusion TCGA_RNA-Seq DHRS2-GSTM2 DHRS2 chr14 24105981 + GSTM2 chr1 110213909 + Exonic hg19 BLCA TCGA-G2-A2EO-01A 2 2 5'UTR-CDS Inter-chr q11.2 p13.3 17226 ChimerSeq STARFusion TCGA_RNA-Seq CD44-CREBZF CD44 chr11 35211612 + CREBZF chr11 85371641 - Exonic hg19 BLCA TCGA-G2-A2EO-01A 2 1 CDS-3'UTR Intra-chr p13 Oncogene Tumor suppressor gene q14.1 Transcription factor Seq+ 17227 ChimerSeq STARFusion TCGA_RNA-Seq SHFM1-CORO1C SHFM1 chr7 96339000 - CORO1C chr12 109095099 - Exonic hg19 BLCA TCGA-G2-A2EO-01A 2 1 CDS-5'UTR Inter-chr q24.11 17228 ChimerSeq STARFusion TCGA_RNA-Seq MLLT6-TCAP MLLT6 chr17 36861994 + TCAP chr17 37821969 + Exonic hg19 BLCA TCGA-ZF-AA4T-01A 160 2416 Out-of-frame Intra-chr q12 q12 Seq+ 17229 ChimerSeq STARFusion TCGA_RNA-Seq MLLT6-TCAP MLLT6 chr17 36861994 + TCAP chr17 37821626 + Exonic hg19 BLCA TCGA-ZF-AA4T-01A 77 2416 In-Frame Intra-chr q12 q12 Seq+ 17230 ChimerSeq STARFusion TCGA_RNA-Seq SRCIN1-PSMB3 SRCIN1 chr17 36761886 - PSMB3 chr17 36918664 + Exonic hg19 BLCA TCGA-ZF-AA4T-01A 12 152 Out-of-frame Intra-chr q12 Seq+ 17231 ChimerSeq STARFusion TCGA_RNA-Seq CDK12-IKZF3 CDK12 chr17 37657692 + IKZF3 chr17 37988404 - Exonic hg19 BLCA TCGA-ZF-AA4T-01A 30 63 Out-of-frame Intra-chr q12 Oncogene q21.1 Tumor suppressor gene Transcription factor Seq+ 17232 ChimerSeq STARFusion TCGA_RNA-Seq SRCIN1-PSMB3 SRCIN1 chr17 36761939 - PSMB3 chr17 36918662 + Exonic hg19 BLCA TCGA-ZF-AA4T-01A 7 152 Out-of-frame Intra-chr q12 Seq+ 17233 ChimerSeq STARFusion TCGA_RNA-Seq LIPG-UCMA LIPG chr18 47095918 + UCMA chr10 13275800 - Exonic hg19 BLCA TCGA-ZF-AA4T-01A 7 36 In-Frame Inter-chr q21.1 p13 Seq+ 17234 ChimerSeq STARFusion TCGA_RNA-Seq IKZF3-SRCIN1 IKZF3 chr17 37985640 - SRCIN1 chr17 36752382 - Exonic hg19 BLCA TCGA-ZF-AA4T-01A 3 31 3'UTR-CDS Intra-chr q21.1 Tumor suppressor gene Transcription factor q12 Seq+ 17235 ChimerSeq STARFusion TCGA_RNA-Seq WDR6-CPNE8 WDR6 chr3 49044964 + CPNE8 chr12 39047872 - Exonic hg19 BLCA TCGA-ZF-AA4T-01A 6 12 Out-of-frame Inter-chr p21.31 q12 Seq+ 17236 ChimerSeq STARFusion TCGA_RNA-Seq SEC13-GOLPH3L SEC13 chr3 10362734 - GOLPH3L chr1 150634404 - Exonic hg19 BLCA TCGA-ZF-AA4T-01A 5 5 In-Frame Inter-chr p25.3 q21.3 Seq+ 17237 ChimerSeq STARFusion TCGA_RNA-Seq L3MBTL4-TRDMT1 L3MBTL4 chr18 6237963 - TRDMT1 chr10 17216659 - Exonic hg19 BLCA TCGA-ZF-AA4T-01A 3 7 In-Frame Inter-chr p11.31 Tumor suppressor gene Transcription factor p13 Seq+ 17238 ChimerSeq STARFusion TCGA_RNA-Seq CDK12-PLXDC1 CDK12 chr17 37619370 + PLXDC1 chr17 37265644 - Exonic hg19 BLCA TCGA-ZF-AA4T-01A 2 10 Out-of-frame Intra-chr q12 Oncogene q12 Seq+ 17239 ChimerSeq STARFusion TCGA_RNA-Seq MLLT6-PNMT MLLT6 chr17 36861994 + PNMT chr17 37825882 + Exonic hg19 BLCA TCGA-ZF-AA4T-01A 2 9 In-Frame Intra-chr q12 q12 Seq+ 17240 ChimerSeq STARFusion TCGA_RNA-Seq LASP1-STAC2 LASP1 chr17 37046757 + STAC2 chr17 37374426 - Exonic hg19 BLCA TCGA-ZF-AA4T-01A 3 1 In-Frame Intra-chr q12 q12 17241 ChimerSeq STARFusion TCGA_RNA-Seq MYO5B-DCC MYO5B chr18 47721137 - DCC chr18 50278424 + Exonic hg19 BLCA TCGA-ZF-AA4T-01A 2 3 Out-of-frame Intra-chr q21.1 q21.2 Oncogene Tumor suppressor gene Seq+ 17242 ChimerSeq STARFusion TCGA_RNA-Seq AKR1C1-PMM2 AKR1C1 chr10 5018125 + PMM2 chr16 8941581 + Exonic hg19 BLCA TCGA-ZF-AA4T-01A 2 1 Out-of-frame Inter-chr p15.1 p13.2 17243 ChimerSeq STARFusion TCGA_RNA-Seq TLN2-IGLL5 TLN2 chr15 62949992 + IGLL5 chr22 23235961 + Exonic hg19 BLCA TCGA-GC-A6I1-01A 76 0 Out-of-frame Inter-chr q22.2 q11.22 17244 ChimerSeq STARFusion TCGA_RNA-Seq PSMD13-HSD17B12 PSMD13 chr11 237144 + HSD17B12 chr11 43819870 + Exonic hg19 BLCA TCGA-GC-A6I1-01A 4 13 Out-of-frame Intra-chr p15.5 p11.2 Seq+ 17245 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5P1-GSG1L SLC7A5P1 chr16 29624424 - GSG1L chr16 27974524 - Exonic hg19 BLCA TCGA-CU-A3KJ-01A 55 146 3'UTR-CDS Intra-chr p11.2 p12.1 17246 ChimerSeq STARFusion TCGA_RNA-Seq INPP5A-TTC40 INPP5A chr10 134579350 + TTC40 chr10 134622408 - Exonic hg19 BLCA TCGA-CU-A3KJ-01A 6 15 In-Frame Intra-chr q26.3 Seq+ 17247 ChimerSeq STARFusion TCGA_RNA-Seq SEPHS2-MAPK3 SEPHS2 chr16 30456543 - MAPK3 chr16 30125698 - Exonic hg19 BLCA TCGA-CU-A3KJ-01A 6 8 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 17248 ChimerSeq STARFusion TCGA_RNA-Seq DEPDC1B-PDE4D DEPDC1B chr5 59938639 - PDE4D chr5 59481514 - Exonic hg19 BLCA TCGA-CU-A3KJ-01A 3 10 CDS-5'UTR Intra-chr q12.1 q12.1 Seq+ 17249 ChimerSeq STARFusion TCGA_RNA-Seq NIPSNAP1-S100A9 NIPSNAP1 chr22 29977055 - S100A9 chr1 153330745 + Exonic hg19 BLCA TCGA-CU-A3KJ-01A 4 1 CDS-5'UTR Inter-chr q12.2 q21.3 17250 ChimerSeq STARFusion TCGA_RNA-Seq RNF217-TPD52L1 RNF217 chr6 125398004 + TPD52L1 chr6 125541224 + Exonic hg19 BLCA TCGA-CU-A3KJ-01A 2 0 In-Frame Intra-chr q22.31 q22.31 17251 ChimerSeq STARFusion TCGA_RNA-Seq SMCHD1-NDC80 SMCHD1 chr18 2656260 + NDC80 chr18 2599018 + Exonic hg19 BLCA TCGA-ZF-A9RD 4 45 In-Frame Intra-chr p11.32 Tumor suppressor gene p11.32 Seq+ 17252 ChimerSeq STARFusion TCGA_RNA-Seq JUP-ACLY JUP chr17 39942840 - ACLY chr17 40035177 - Exonic hg19 BLCA TCGA-ZF-A9RD 2 10 5'UTR-CDS Intra-chr q21.2 Tumor suppressor gene q21.2 Seq+ 17253 ChimerSeq STARFusion TCGA_RNA-Seq LAP3-DDX1 LAP3 chr4 17583437 + DDX1 chr2 15746274 + Exonic hg19 BLCA TCGA-G2-A2EF-01A 163 314 In-Frame Inter-chr p15.32 p24.3 Seq+ 17254 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57728677 + VMP1 chr17 57915656 + Exonic hg19 BLCA TCGA-G2-A2EF-01A 118 398 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 17255 ChimerSeq STARFusion TCGA_RNA-Seq SEC24C-ADK SEC24C chr10 75504195 + ADK chr10 76429941 + Exonic hg19 BLCA TCGA-G2-A2EF-01A 120 113 5'UTR-CDS Intra-chr q22.2 q22.2 Seq+ 17256 ChimerSeq STARFusion TCGA_RNA-Seq CDK6-HEPACAM2 CDK6 chr7 92404010 - HEPACAM2 chr7 92821676 - Exonic hg19 BLCA TCGA-G2-A2EF-01A 45 185 In-Frame Intra-chr q21.2 CMGC:CDK Oncogene Tumor suppressor gene q21.2 Seq+ 17257 ChimerSeq STARFusion TCGA_RNA-Seq SPRED2-RAB1A SPRED2 chr2 65659096 - RAB1A chr2 65331940 - Exonic hg19 BLCA TCGA-G2-A2EF-01A 21 46 In-Frame Intra-chr p14 p14 Seq+ 17258 ChimerSeq STARFusion TCGA_RNA-Seq ALG5-WBSCR17 ALG5 chr13 37559764 - WBSCR17 chr7 71175746 + Exonic hg19 BLCA TCGA-G2-A2EF-01A 11 64 In-Frame Inter-chr q13.3 q11.22 Seq+ 17259 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D20-C20orf96 TBC1D20 chr20 442980 - C20orf96 chr20 270317 - Exonic hg19 BLCA TCGA-G2-A2EF-01A 10 43 Out-of-frame Intra-chr p13 p13 Seq+ 17260 ChimerSeq STARFusion TCGA_RNA-Seq DALRD3-PRKAR2A DALRD3 chr3 49054207 - PRKAR2A chr3 48789750 - Exonic hg19 BLCA TCGA-G2-A2EF-01A 4 12 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 17261 ChimerSeq STARFusion TCGA_RNA-Seq E2F3-CDKAL1 E2F3 chr6 20404063 + CDKAL1 chr6 20546577 + Exonic hg19 BLCA TCGA-G2-A2EF-01A 4 7 CDS-5'UTR Intra-chr p22.3 Tumor suppressor gene Transcription factor p22.3 17262 ChimerSeq STARFusion TCGA_RNA-Seq TXNL1-LRP1B TXNL1 chr18 54305574 - LRP1B chr2 141299540 - Exonic hg19 BLCA TCGA-G2-A2EF-01A 4 6 Out-of-frame Inter-chr q21.31 q22.2 Oncogene Tumor suppressor gene Seq+ 17263 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-WDR70 NIPBL chr5 36877280 + WDR70 chr5 37379591 + Exonic hg19 BLCA TCGA-G2-A2EF-01A 3 6 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 17264 ChimerSeq STARFusion TCGA_RNA-Seq ZNF565-THAP8 ZNF565 chr19 36705524 - THAP8 chr19 36531038 - Exonic hg19 BLCA TCGA-G2-A2EF-01A 4 1 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.12 Transcription factor Seq+ 17265 ChimerSeq STARFusion TCGA_RNA-Seq TEFM-CADM2 TEFM chr17 29227431 - CADM2 chr3 85932441 + Exonic hg19 BLCA TCGA-G2-A2EF-01A 2 4 Out-of-frame Inter-chr q11.2 p12.1 Tumor suppressor gene 17266 ChimerSeq STARFusion TCGA_RNA-Seq SRGAP1-KCNMB4 SRGAP1 chr12 64238663 + KCNMB4 chr12 70793989 + Exonic hg19 BLCA TCGA-BT-A42C-01A 49 411 Out-of-frame Intra-chr q14.2 q15 Seq+ 17267 ChimerSeq STARFusion TCGA_RNA-Seq NUP107-TMBIM4 NUP107 chr12 69113434 + TMBIM4 chr12 66532549 - Exonic hg19 BLCA TCGA-BT-A42C-01A 3 4 Out-of-frame Intra-chr q15 q14.3 Seq+ 17268 ChimerSeq STARFusion TCGA_RNA-Seq GMCL1-MXD1 GMCL1 chr2 70057284 + MXD1 chr2 70162483 + Exonic hg19 BLCA TCGA-BT-A42C-01A 2 4 In-Frame Intra-chr p13.3 p13.3 Transcription factor 17269 ChimerSeq STARFusion TCGA_RNA-Seq CCBP2-KRBOX1 CCBP2 chr3 42861203 + KRBOX1 chr3 42980342 + Exonic hg19 BLCA TCGA-BT-A42C-01A 2 0 5'UTR-5'UTR Intra-chr p22.1 Seq+ 17270 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3B-EMP3 FNDC3B chr3 171969331 + EMP3 chr19 48832609 + Exonic hg19 BLCA TCGA-FD-A5BT-01A 7 121 In-Frame Inter-chr q26.31 q13.33 Seq+ 17271 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3B-EMP3 FNDC3B chr3 171969331 + EMP3 chr19 48830087 + Exonic hg19 BLCA TCGA-FD-A5BT-01A 5 121 CDS-5'UTR Inter-chr q26.31 q13.33 Seq+ 17272 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3B-EMP3 FNDC3B chr3 171969331 + EMP3 chr19 48833558 + Exonic hg19 BLCA TCGA-FD-A5BT-01A 2 121 In-Frame Inter-chr q26.31 q13.33 Seq+ 17273 ChimerSeq STARFusion TCGA_RNA-Seq ABCB8-TMSB4X ABCB8 chr7 150731916 + TMSB4X chrX 12994365 + Exonic hg19 BLCA TCGA-FD-A5BT-01A 2 1 CDS-5'UTR Inter-chr q36.1 p22.2 17274 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1737458 + Exonic hg19 BLCA TCGA-CF-A8HY-01A 316 827 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 17275 ChimerSeq STARFusion TCGA_RNA-Seq NCAPD3-KBTBD3 NCAPD3 chr11 134062584 - KBTBD3 chr11 105929836 - Exonic hg19 BLCA TCGA-CF-A8HY-01A 2 5 CDS-5'UTR Intra-chr q25 q22.3 Seq+ 17276 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-CASKIN1 CREBBP chr16 3794895 - CASKIN1 chr16 2240359 - Exonic hg19 BLCA TCGA-GU-A42R-01A 16 62 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 17277 ChimerSeq STARFusion TCGA_RNA-Seq TMSB15B-H2BFXP TMSB15B chrX 103219195 + H2BFXP chrX 103316442 - Exonic hg19 BLCA TCGA-GU-A42R-01A 2 0 CDS-3'UTR Intra-chr q22.2 17278 ChimerSeq STARFusion TCGA_RNA-Seq HOOK3-BAALC HOOK3 chr8 42780772 + BAALC chr8 104225147 + Exonic hg19 BLCA TCGA-K4-A6MB-01A 18 133 Out-of-frame Intra-chr p11.21 Oncogene q22.3 Seq+ 17279 ChimerSeq STARFusion TCGA_RNA-Seq ZNF251-ARHGAP39 ZNF251 chr8 145979068 - ARHGAP39 chr8 145773873 - Exonic hg19 BLCA TCGA-K4-A6MB-01A 31 69 Out-of-frame Intra-chr Transcription factor q24.3 Seq+ 17280 ChimerSeq STARFusion TCGA_RNA-Seq HOOK3-BAALC HOOK3 chr8 42780772 + BAALC chr8 104240217 + Exonic hg19 BLCA TCGA-K4-A6MB-01A 6 133 In-Frame Intra-chr p11.21 Oncogene q22.3 Seq+ 17281 ChimerSeq STARFusion TCGA_RNA-Seq EVI5-GLMN EVI5 chr1 93070864 - GLMN chr1 92737209 - Exonic hg19 BLCA TCGA-K4-A6MB-01A 19 77 In-Frame Intra-chr p22.1 p22.1 Seq+ 17282 ChimerSeq STARFusion TCGA_RNA-Seq GRID1-GLUD1 GRID1 chr10 88123698 - GLUD1 chr10 88836413 - Exonic hg19 BLCA TCGA-K4-A6MB-01A 10 46 In-Frame Intra-chr q23.2 q23.2 Seq+ 17283 ChimerSeq STARFusion TCGA_RNA-Seq DIEXF-TRAF3IP3 DIEXF chr1 210004388 + TRAF3IP3 chr1 209946293 + Exonic hg19 BLCA TCGA-K4-A6MB-01A 6 17 Out-of-frame Intra-chr q32.2 q32.2 Seq+ 17284 ChimerSeq STARFusion TCGA_RNA-Seq FBXO42-SPATA21 FBXO42 chr1 16678750 - SPATA21 chr1 16731599 - Exonic hg19 BLCA TCGA-K4-A6MB-01A 6 9 5'UTR-CDS Intra-chr p36.13 p36.13 Seq+ 17285 ChimerSeq STARFusion TCGA_RNA-Seq SRGAP2D-ATF6 SRGAP2D chr1 121129692 + ATF6 chr1 161761198 + Exonic hg19 BLCA TCGA-K4-A6MB-01A 3 6 Out-of-frame Intra-chr q21.1 q23.3 Transcription factor 17286 ChimerSeq STARFusion TCGA_RNA-Seq RNF19A-NCALD RNF19A chr8 101322095 - NCALD chr8 102731876 - Exonic hg19 BLCA TCGA-K4-A6MB-01A 2 9 5'UTR-5'UTR Intra-chr q22.2 q22.3 Seq+ 17287 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D1-PGM2 TBC1D1 chr4 37904133 + PGM2 chr4 37831586 + Exonic hg19 BLCA TCGA-K4-A6MB-01A 3 1 In-Frame Intra-chr p14 p14 Seq+ 17288 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 81083660 - MRPS28 chr8 80831383 - Exonic hg19 BLCA TCGA-E7-A6ME-01A 25 59 Out-of-frame Intra-chr q21.13 q21.13 17289 ChimerSeq STARFusion TCGA_RNA-Seq EMP2-RPL30 EMP2 chr16 10641397 - RPL30 chr8 99057627 - Exonic hg19 BLCA TCGA-E7-A6ME-01A 2 1 CDS-5'UTR Inter-chr p13.13 Tumor suppressor gene q22.2 17290 ChimerSeq STARFusion TCGA_RNA-Seq LIMCH1-UCHL1 LIMCH1 chr4 41362953 + UCHL1 chr4 41266120 + Exonic hg19 BLCA TCGA-2F-A9KW-01A 30 245 Out-of-frame Intra-chr p13 p13 Tumor suppressor gene Seq+ 17291 ChimerSeq STARFusion TCGA_RNA-Seq LIMCH1-UCHL1 LIMCH1 chr4 41362953 + UCHL1 chr4 41265242 + Exonic hg19 BLCA TCGA-2F-A9KW-01A 22 245 In-Frame Intra-chr p13 p13 Tumor suppressor gene Seq+ 17292 ChimerSeq STARFusion TCGA_RNA-Seq LIMCH1-UCHL1 LIMCH1 chr4 41362957 + UCHL1 chr4 41265246 + Exonic hg19 BLCA TCGA-2F-A9KW-01A 19 245 Out-of-frame Intra-chr p13 p13 Tumor suppressor gene Seq+ 17293 ChimerSeq STARFusion TCGA_RNA-Seq CDS1-UGT1A6 CDS1 chr4 85530678 + UGT1A6 chr2 234675680 + Exonic hg19 BLCA TCGA-2F-A9KW-01A 26 53 In-Frame Inter-chr q21.23 Tumor suppressor gene q37.1 Seq+ 17294 ChimerSeq STARFusion TCGA_RNA-Seq CDS1-UGT1A1 CDS1 chr4 85530678 + UGT1A1 chr2 234675680 + Exonic hg19 BLCA TCGA-2F-A9KW-01A 26 48 In-Frame Inter-chr q21.23 Tumor suppressor gene q37.1 Oncogene Seq+ 17295 ChimerSeq STARFusion TCGA_RNA-Seq CDS1-UGT1A10 CDS1 chr4 85530678 + UGT1A10 chr2 234675680 + Exonic hg19 BLCA TCGA-2F-A9KW-01A 26 48 In-Frame Inter-chr q21.23 Tumor suppressor gene q37.1 Seq+ 17296 ChimerSeq STARFusion TCGA_RNA-Seq CDS1-UGT1A3 CDS1 chr4 85530678 + UGT1A3 chr2 234675680 + Exonic hg19 BLCA TCGA-2F-A9KW-01A 26 48 In-Frame Inter-chr q21.23 Tumor suppressor gene q37.1 Seq+ 17297 ChimerSeq STARFusion TCGA_RNA-Seq CDS1-UGT1A4 CDS1 chr4 85530678 + UGT1A4 chr2 234675680 + Exonic hg19 BLCA TCGA-2F-A9KW-01A 26 48 In-Frame Inter-chr q21.23 Tumor suppressor gene q37.1 Seq+ 17298 ChimerSeq STARFusion TCGA_RNA-Seq CDS1-UGT1A5 CDS1 chr4 85530678 + UGT1A5 chr2 234675680 + Exonic hg19 BLCA TCGA-2F-A9KW-01A 26 48 In-Frame Inter-chr q21.23 Tumor suppressor gene q37.1 Seq+ 17299 ChimerSeq STARFusion TCGA_RNA-Seq CDS1-UGT1A7 CDS1 chr4 85530678 + UGT1A7 chr2 234675680 + Exonic hg19 BLCA TCGA-2F-A9KW-01A 26 48 In-Frame Inter-chr q21.23 Tumor suppressor gene q37.1 Seq+ 17300 ChimerSeq STARFusion TCGA_RNA-Seq CDS1-UGT1A8 CDS1 chr4 85530678 + UGT1A8 chr2 234675680 + Exonic hg19 BLCA TCGA-2F-A9KW-01A 26 48 In-Frame Inter-chr q21.23 Tumor suppressor gene q37.1 Seq+ 17301 ChimerSeq STARFusion TCGA_RNA-Seq CDS1-UGT1A9 CDS1 chr4 85530678 + UGT1A9 chr2 234675680 + Exonic hg19 BLCA TCGA-2F-A9KW-01A 26 48 In-Frame Inter-chr q21.23 Tumor suppressor gene q37.1 Seq+ 17302 ChimerSeq STARFusion TCGA_RNA-Seq VGLL4-TMEM40 VGLL4 chr3 11643307 - TMEM40 chr3 12791339 - Exonic hg19 BLCA TCGA-2F-A9KW-01A 7 15 CDS-5'UTR Intra-chr p25.2 p25.2 Seq+ 17303 ChimerSeq STARFusion TCGA_RNA-Seq CAP1-NFYC CAP1 chr1 40506473 + NFYC chr1 41204508 + Exonic hg19 BLCA TCGA-KQ-A41P-01A 3 1 5'UTR-5'UTR Intra-chr p34.2 p34.2 Transcription factor Seq+ 17304 ChimerSeq STARFusion TCGA_RNA-Seq NEIL3-AGA NEIL3 chr4 178272703 + AGA chr4 178352962 - Exonic hg19 BLCA TCGA-KQ-A41P-01A 2 5 In-Frame Intra-chr q34.3 q34.3 Seq+ 17305 ChimerSeq STARFusion TCGA_RNA-Seq BCR-PPIL2 BCR chr22 23615961 + PPIL2 chr22 22048105 + Exonic hg19 BLCA TCGA-FD-A43N-01A 10 28 Out-of-frame Intra-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q11.21 Seq+ 17306 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA7-TRIM21 PLEKHA7 chr11 17035536 - TRIM21 chr11 4411688 - Exonic hg19 BLCA TCGA-FD-A43N-01A 5 13 CDS-5'UTR Intra-chr p15.1 p15.4 Seq+ 17307 ChimerSeq STARFusion TCGA_RNA-Seq WDFY3-LINC00707 WDFY3 chr4 85656196 - LINC00707 chr10 6823266 + Exonic hg19 BLCA TCGA-FD-A43N-01A 2 9 Out-of-frame Inter-chr q21.23 p14 17308 ChimerSeq STARFusion TCGA_RNA-Seq RAB11FIP4-ASIC2 RAB11FIP4 chr17 29761140 + ASIC2 chr17 31351032 - Exonic hg19 BLCA TCGA-FD-A43N-01A 2 6 Out-of-frame Intra-chr q11.2 q12 17309 ChimerSeq STARFusion TCGA_RNA-Seq NUP98-DNHD1 NUP98 chr11 3774546 - DNHD1 chr11 6584212 + Exonic hg19 BLCA TCGA-FD-A43N-01A 2 4 Out-of-frame Intra-chr p15.4 Oncogene Tumor suppressor gene p15.4 Seq+ 17310 ChimerSeq STARFusion TCGA_RNA-Seq NEK1-LOC100506122 NEK1 chr4 170533171 - LOC100506122 chr4 171976506 + Exonic hg19 BLCA TCGA-UY-A78P-01A 3 8 5'UTR-5'UTR Intra-chr q33 Other:NEK 17311 ChimerSeq STARFusion TCGA_RNA-Seq G2E3-SCFD1 G2E3 chr14 31028478 + SCFD1 chr14 31203996 + Exonic hg19 BLCA TCGA-UY-A78P-01A 2 1 5'UTR-5'UTR Intra-chr q12 q12 17312 ChimerSeq STARFusion TCGA_RNA-Seq GNPAT-CAPN9 GNPAT chr1 231386889 + CAPN9 chr1 230923268 + Exonic hg19 BLCA TCGA-PQ-A6FN-01A 13 44 In-Frame Intra-chr q42.2 q42.2 Seq+ 17313 ChimerSeq STARFusion TCGA_RNA-Seq GNPAT-CAPN9 GNPAT chr1 231377202 + CAPN9 chr1 230923268 + Exonic hg19 BLCA TCGA-PQ-A6FN-01A 2 44 In-Frame Intra-chr q42.2 q42.2 Seq+ 17314 ChimerSeq STARFusion TCGA_RNA-Seq GNPAT-CAPN9 GNPAT chr1 231386889 + CAPN9 chr1 230925878 + Exonic hg19 BLCA TCGA-PQ-A6FN-01A 2 44 In-Frame Intra-chr q42.2 q42.2 Seq+ 17315 ChimerSeq STARFusion TCGA_RNA-Seq EXT1-FAM155A EXT1 chr8 119122324 - FAM155A chr13 107823134 - Exonic hg19 BLCA TCGA-BT-A3PK-01A 2 14 Out-of-frame Inter-chr q24.11 Oncogene Tumor suppressor gene q33.3 Seq+ 17316 ChimerSeq STARFusion TCGA_RNA-Seq MED16-MEX3D MED16 chr19 881559 - MEX3D chr19 1556922 - Exonic hg19 BLCA TCGA-BT-A3PK-01A 2 11 In-Frame Intra-chr p13.3 p13.3 Seq+ 17317 ChimerSeq STARFusion TCGA_RNA-Seq ROCK1-GUCA2B ROCK1 chr18 18603581 - GUCA2B chr1 42620351 + Exonic hg19 BLCA TCGA-BT-A3PK-01A 4 3 In-Frame Inter-chr q11.1 AGC:DMPK p34.2 Seq+ 17318 ChimerSeq STARFusion TCGA_RNA-Seq LRP1-PDXK LRP1 chr12 57560829 + PDXK chr21 45173464 + Exonic hg19 BLCA TCGA-BT-A3PK-01A 2 1 In-Frame Inter-chr q13.3 q22.3 17319 ChimerSeq STARFusion TCGA_RNA-Seq L3MBTL2-TEF L3MBTL2 chr22 41605937 + TEF chr22 41783355 + Exonic hg19 BLCA TCGA-E7-A3X6-01A 2 7 In-Frame Intra-chr q13.2 q13.2 Transcription factor Seq+ 17320 ChimerSeq STARFusion TCGA_RNA-Seq FXYD3-TARM1 FXYD3 chr19 35610320 + TARM1 chr19 54579170 - Exonic hg19 BLCA TCGA-DK-A3X2-01A 10 166 In-Frame Intra-chr q13.12 Seq+ 17321 ChimerSeq STARFusion TCGA_RNA-Seq FXYD3-TARM1 FXYD3 chr19 35610320 + TARM1 chr19 54578366 - Exonic hg19 BLCA TCGA-DK-A3X2-01A 2 166 In-Frame Intra-chr q13.12 Seq+ 17322 ChimerSeq STARFusion TCGA_RNA-Seq ZFP30-CEACAM7 ZFP30 chr19 38135511 - CEACAM7 chr19 42191152 - Exonic hg19 BLCA TCGA-DK-A3X2-01A 20 45 In-Frame Intra-chr q13.12 Transcription factor Seq+ 17323 ChimerSeq STARFusion TCGA_RNA-Seq TMEM48-GLIS1 TMEM48 chr1 54284644 - GLIS1 chr1 54065951 - Exonic hg19 BLCA TCGA-DK-A3X2-01A 12 19 CDS-5'UTR Intra-chr p32.3 Transcription factor 17324 ChimerSeq STARFusion TCGA_RNA-Seq SPEN-EFHD2 SPEN chr1 16174645 + EFHD2 chr1 15752367 + Exonic hg19 BLCA TCGA-DK-A3X2-01A 8 32 In-Frame Intra-chr p36.21 Transcription factor p36.21 Seq+ 17325 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-LINC00578 TBL1XR1 chr3 176914909 - LINC00578 chr3 177347205 + Exonic hg19 BLCA TCGA-DK-A3X2-01A 3 21 5'UTR-5'UTR Intra-chr q26.32 q26.32 Seq+ 17326 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-LINC00578 TBL1XR1 chr3 176914909 - LINC00578 chr3 177257183 + Exonic hg19 BLCA TCGA-DK-A3X2-01A 2 21 5'UTR-5'UTR Intra-chr q26.32 q26.32 Seq+ 17327 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-EEF2 RNA45S5 chrUn_gl000220 115285 + EEF2 chr19 3983274 - Exonic hg19 BLCA TCGA-DK-A3X2-01A 3 10 Out-of-frame Inter-chr p13.3 17328 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC9-AGO2 TRAPPC9 chr8 141467738 - AGO2 chr8 141551457 - Exonic hg19 BLCA TCGA-DK-A3X2-01A 2 13 Out-of-frame Intra-chr q24.3 q24.3 17329 ChimerSeq STARFusion TCGA_RNA-Seq USP9Y-ARSD USP9Y chrY 14883089 + ARSD chrX 2836383 - Exonic hg19 BLCA TCGA-DK-A3X2-01A 3 7 Out-of-frame Inter-chr q11.221 p22.33 17330 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-KRT8 RNA45S5 chrUn_gl000220 115489 + KRT8 chr12 53298817 - Exonic hg19 BLCA TCGA-DK-A3X2-01A 3 5 Out-of-frame Inter-chr q13.13 17331 ChimerSeq STARFusion TCGA_RNA-Seq H1FX-RNA45S5 H1FX chr3 129034934 - RNA45S5 chrUn_gl000220 110330 + Exonic hg19 BLCA TCGA-DK-A3X2-01A 3 3 Out-of-frame Inter-chr q21.3 17332 ChimerSeq STARFusion TCGA_RNA-Seq HERC1-DAPK2 HERC1 chr15 64126026 - DAPK2 chr15 64231560 - Exonic hg19 BLCA TCGA-DK-A3X2-01A 2 6 5'UTR-CDS Intra-chr q22.31 q22.31 CAMK:DAPK Tumor suppressor gene Seq+ 17333 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-PHACTR4 RCC1 chr1 28844820 + PHACTR4 chr1 28815682 + Exonic hg19 BLCA TCGA-DK-A3X2-01A 2 2 5'UTR-CDS Intra-chr p35.3 p35.3 Tumor suppressor gene Seq+ 17334 ChimerSeq STARFusion TCGA_RNA-Seq FGFR2-ATE1 FGFR2 chr10 123298106 - ATE1 chr10 123503373 - Exonic hg19 BLCA TCGA-DK-A3X2-01A 2 1 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q26.13 Seq+ 17335 ChimerSeq STARFusion TCGA_RNA-Seq KRBOX1-FAM198A KRBOX1 chr3 42983563 + FAM198A chr3 43095013 + Exonic hg19 BLCA TCGA-FJ-A3Z9-01A 2 4 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 17336 ChimerSeq STARFusion TCGA_RNA-Seq STAG2-RGAG1 STAG2 chrX 123095706 + RGAG1 chrX 109693795 + Exonic hg19 BLCA TCGA-GC-A4ZW-01A 9 352 5'UTR-5'UTR Intra-chr q25 Oncogene Seq+ 17337 ChimerSeq STARFusion TCGA_RNA-Seq STAG2-RGAG1 STAG2 chrX 123094716 + RGAG1 chrX 109693795 + Exonic hg19 BLCA TCGA-GC-A4ZW-01A 7 352 5'UTR-5'UTR Intra-chr q25 Oncogene Seq+ 17338 ChimerSeq STARFusion TCGA_RNA-Seq GAS2L1-SMTN GAS2L1 chr22 29704728 + SMTN chr22 31500302 + Exonic hg19 BLCA TCGA-GC-A4ZW-01A 24 137 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 17339 ChimerSeq STARFusion TCGA_RNA-Seq GULP1-BOLL GULP1 chr2 189156893 + BOLL chr2 198607883 - Exonic hg19 BLCA TCGA-GC-A4ZW-01A 7 25 5'UTR-CDS Intra-chr q32.1 q33.1 Seq+ 17340 ChimerSeq STARFusion TCGA_RNA-Seq SHPRH-RCL1 SHPRH chr6 146273485 - RCL1 chr9 4860125 + Exonic hg19 BLCA TCGA-GC-A4ZW-01A 6 16 Out-of-frame Inter-chr q24.3 Tumor suppressor gene p24.1 Seq+ 17341 ChimerSeq STARFusion TCGA_RNA-Seq GULP1-BOLL GULP1 chr2 189157839 + BOLL chr2 198607883 - Exonic hg19 BLCA TCGA-GC-A4ZW-01A 2 25 5'UTR-CDS Intra-chr q32.1 q33.1 Seq+ 17342 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0430-EEF2K KIAA0430 chr16 15694285 - EEF2K chr16 22291519 + Exonic hg19 BLCA TCGA-GC-A4ZW-01A 3 17 Out-of-frame Intra-chr p12.2 Seq+ 17343 ChimerSeq STARFusion TCGA_RNA-Seq SNTB1-ZNF250 SNTB1 chr8 121561002 - ZNF250 chr8 146115788 - Exonic hg19 BLCA TCGA-GC-A4ZW-01A 2 11 CDS-5'UTR Intra-chr q24.12 q24.3 Transcription factor Seq+ 17344 ChimerSeq STARFusion TCGA_RNA-Seq RSL1D1-CCP110 RSL1D1 chr16 11941525 - CCP110 chr16 19539189 + Exonic hg19 BLCA TCGA-GC-A4ZW-01A 3 3 CDS-5'UTR Intra-chr p13.13 p12.3 Seq+ 17345 ChimerSeq STARFusion TCGA_RNA-Seq FDFT1-TNKS FDFT1 chr8 11660440 + TNKS chr8 9562173 + Exonic hg19 BLCA TCGA-GC-A4ZW-01A 2 5 In-Frame Intra-chr p23.1 p23.1 Seq+ 17346 ChimerSeq STARFusion TCGA_RNA-Seq KLHL42-MRPS35 KLHL42 chr12 27934135 + MRPS35 chr12 27908114 + Exonic hg19 BLCA TCGA-G2-A3IE-01A 14 49 Out-of-frame Intra-chr p11.22 p11.22 Seq+ 17347 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-OXR1 WARS2 chr1 119683178 - OXR1 chr8 107371704 + Exonic hg19 BLCA TCGA-G2-A3IE-01A 4 2 CDS-5'UTR Inter-chr p12 q23.1 Seq+ 17348 ChimerSeq STARFusion TCGA_RNA-Seq CCDC14-HADHB CCDC14 chr3 123652520 - HADHB chr2 26502862 + Exonic hg19 BLCA TCGA-G2-A3IE-01A 2 1 In-Frame Inter-chr q21.1 p23.3 Seq+ 17349 ChimerSeq STARFusion TCGA_RNA-Seq ZNF37A-PARD3 ZNF37A chr10 38385560 + PARD3 chr10 34985347 - Exonic hg19 BLCA TCGA-UY-A9PA-01A 2 2 In-Frame Intra-chr p11.1 Transcription factor p11.21 17350 ChimerSeq STARFusion TCGA_RNA-Seq POLE-ANKS1B POLE chr12 133263840 - ANKS1B chr12 99225914 - Exonic hg19 BLCA TCGA-CF-A27C-01A 5 11 Out-of-frame Intra-chr q24.33 q23.1 Seq+ 17351 ChimerSeq STARFusion TCGA_RNA-Seq UNC13B-PTPRD UNC13B chr9 35386290 + PTPRD chr9 8636844 - Exonic hg19 BLCA TCGA-CF-A27C-01A 3 2 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene Seq+ 17352 ChimerSeq STARFusion TCGA_RNA-Seq LOC220729-SDHAP2 LOC220729 chr3 197348575 - SDHAP2 chr3 195392937 + Exonic hg19 BLCA TCGA-CF-A27C-01A 2 4 3'UTR-5'UTR Intra-chr 17353 ChimerSeq STARFusion TCGA_RNA-Seq EHMT1-PPP1R37 EHMT1 chr9 140622981 + PPP1R37 chr19 45641772 + Exonic hg19 BLCA TCGA-H4-A2HO-01A 7 27 In-Frame Inter-chr q34.3 q13.32 Seq+ 17354 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-INCENP UVRAG chr11 75623083 + INCENP chr11 61895623 + Exonic hg19 BLCA TCGA-H4-A2HO-01A 2 2 CDS-5'UTR Intra-chr q13.5 Tumor suppressor gene q12.3 Seq+ 17355 ChimerSeq STARFusion TCGA_RNA-Seq SETBP1-NFYC SETBP1 chr18 42449248 + NFYC chr1 41204508 + Exonic hg19 BLCA TCGA-FD-A43Y-01A 3 26 CDS-5'UTR Inter-chr q12.3 Oncogene Transcription factor p34.2 Transcription factor Seq+ 17356 ChimerSeq STARFusion TCGA_RNA-Seq MTSS1-TATDN1 MTSS1 chr8 125711767 - TATDN1 chr8 125500937 - Exonic hg19 BLCA TCGA-FD-A3N5-01A 18 61 Out-of-frame Intra-chr q24.13 Tumor suppressor gene q24.13 Seq+ 17357 ChimerSeq STARFusion TCGA_RNA-Seq DHRS2-GSTM2 DHRS2 chr14 24105981 + GSTM2 chr1 110213909 + Exonic hg19 BLCA TCGA-XF-A8HF-01A 2 7 5'UTR-CDS Inter-chr q11.2 p13.3 17358 ChimerSeq STARFusion TCGA_RNA-Seq SMARCA5-LRBA SMARCA5 chr4 144469293 + LRBA chr4 151358016 - Exonic hg19 BLCA TCGA-FD-A3B7-01A 6 15 In-Frame Intra-chr q31.21 q31.3 Seq+ 17359 ChimerSeq STARFusion TCGA_RNA-Seq VMP1-RPS6KB1 VMP1 chr17 57785109 + RPS6KB1 chr17 57987923 + Exonic hg19 BLCA TCGA-FD-A3B7-01A 3 0 5'UTR-CDS Intra-chr q23.1 q23.1 Oncogene Seq+ 17360 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-GYG1 EGFR chr7 55087058 + GYG1 chr3 148711929 + Exonic hg19 BLCA TCGA-FD-A3B7-01A 2 1 In-Frame Inter-chr p11.2 TK:EGFR Oncogene q24 Seq+ 17361 ChimerSeq STARFusion TCGA_RNA-Seq LSM3-MRPL22 LSM3 chr3 14225532 + MRPL22 chr5 154335931 + Exonic hg19 BLCA TCGA-FD-A3B7-01A 2 1 In-Frame Inter-chr p25.1 q33.2 Seq+ 17362 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2NL-CTSS NOTCH2NL chr1 145209436 + CTSS chr1 150724484 - Exonic hg19 BLCA TCGA-FD-A3B7-01A 2 0 5'UTR-CDS Intra-chr q21.1 q21.3 17363 ChimerSeq STARFusion TCGA_RNA-Seq SNHG8-NDUFV1 SNHG8 chr4 119200292 + NDUFV1 chr11 67375867 + Exonic hg19 BLCA TCGA-FD-A3B7-01A 2 0 5'UTR-CDS Inter-chr q26 q13.2 17364 ChimerSeq STARFusion TCGA_RNA-Seq GLTSCR2-LOC440311 GLTSCR2 chr19 48258140 + LOC440311 chr15 95399747 + Exonic hg19 BLCA TCGA-CF-A47W-01A 77 30 Out-of-frame Inter-chr Tumor suppressor gene 17365 ChimerSeq STARFusion TCGA_RNA-Seq ZNF564-COL5A3 ZNF564 chr19 12662144 - COL5A3 chr19 10112557 - Exonic hg19 BLCA TCGA-GV-A40G-01A 7 19 In-Frame Intra-chr p13.2 Transcription factor p13.2 Seq+ 17366 ChimerSeq STARFusion TCGA_RNA-Seq COPA-SUMO1P3 COPA chr1 160293221 - SUMO1P3 chr1 160287960 + Exonic hg19 BLCA TCGA-GV-A40G-01A 4 13 CDS-5'UTR Intra-chr q23.2 q23.2 17367 ChimerSeq STARFusion TCGA_RNA-Seq MYBL2-TOX2 MYBL2 chr20 42315712 + TOX2 chr20 42635187 + Exonic hg19 BLCA TCGA-GV-A40G-01A 3 14 Out-of-frame Intra-chr q13.12 Transcription factor q13.12 Seq+ 17368 ChimerSeq STARFusion TCGA_RNA-Seq BCKDHB-C6orf7 BCKDHB chr6 80982938 + C6orf7 chr6 80517058 - Exonic hg19 BLCA TCGA-GV-A40G-01A 2 7 Out-of-frame Intra-chr q14.1 17369 ChimerSeq STARFusion TCGA_RNA-Seq PDXP-SLC17A9 PDXP chr22 38055363 + SLC17A9 chr20 61588117 + Exonic hg19 BLCA TCGA-GV-A40G-01A 2 6 Out-of-frame Inter-chr q13.1 q13.33 Seq+ 17370 ChimerSeq STARFusion TCGA_RNA-Seq AP3D1-DOT1L AP3D1 chr19 2151238 - DOT1L chr19 2180712 + Exonic hg19 BLCA TCGA-GV-A40G-01A 2 4 In-Frame Intra-chr p13.3 p13.3 Oncogene Transcription factor Seq+ 17371 ChimerSeq STARFusion TCGA_RNA-Seq PLCH1-FST PLCH1 chr3 155421935 - FST chr5 52778710 + Exonic hg19 BLCA TCGA-GV-A40G-01A 2 1 5'UTR-CDS Inter-chr q25.31 q11.2 17372 ChimerSeq STARFusion TCGA_RNA-Seq CTSW-FIBP CTSW chr11 65647757 + FIBP chr11 65653134 - Exonic hg19 BLCA TCGA-E7-A8O8-01A 75 335 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 17373 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57725762 + VMP1 chr17 57915656 + Exonic hg19 BLCA TCGA-FD-A5BV-01A 9 42 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 17374 ChimerSeq STARFusion TCGA_RNA-Seq SCUBE2-LDHC SCUBE2 chr11 9090917 - LDHC chr11 18451284 + Exonic hg19 BLCA TCGA-FD-A5BV-01A 5 36 In-Frame Intra-chr p15.4 Tumor suppressor gene p15.1 Seq+ 17375 ChimerSeq STARFusion TCGA_RNA-Seq ZNF14-LINC00663 ZNF14 chr19 19843765 - LINC00663 chr19 19873455 - Exonic hg19 BLCA TCGA-FD-A5BV-01A 3 2 Out-of-frame Intra-chr p13.11 Transcription factor p13.11 17376 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-PHGDH TPD52 chr8 81083660 - PHGDH chr1 120285430 + Exonic hg19 BLCA TCGA-FD-A5BV-01A 2 1 Out-of-frame Inter-chr q21.13 p12 17377 ChimerSeq STARFusion TCGA_RNA-Seq LOC100216545-POR LOC100216545 chr7 104653948 - POR chr7 75608769 + Exonic hg19 BLCA TCGA-ZF-A9R7-01A 19 143 3'UTR-CDS Intra-chr q11.23 17378 ChimerSeq STARFusion TCGA_RNA-Seq LOC100216545-POR LOC100216545 chr7 104653379 - POR chr7 75608769 + Exonic hg19 BLCA TCGA-ZF-A9R7-01A 3 143 3'UTR-CDS Intra-chr q11.23 17379 ChimerSeq STARFusion TCGA_RNA-Seq BIN3-PHYHIP BIN3 chr8 22526557 - PHYHIP chr8 22085899 - Exonic hg19 BLCA TCGA-ZF-A9R7-01A 2 11 CDS-5'UTR Intra-chr p21.3 p21.3 Seq+ 17380 ChimerSeq STARFusion TCGA_RNA-Seq CEP57-DLG2 CEP57 chr11 95552068 + DLG2 chr11 84996409 - Exonic hg19 BLCA TCGA-ZF-A9R7-01A 2 1 Out-of-frame Intra-chr q21 q14.1 Seq+ 17381 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC24-ELP4 DNAJC24 chr11 31392406 + ELP4 chr11 31804941 + Exonic hg19 BLCA TCGA-GD-A6C6-01A 9 11 In-Frame Intra-chr p13 p13 Seq+ 17382 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT5-ZFAS1 B4GALT5 chr20 48330113 - ZFAS1 chr20 47905582 + Exonic hg19 BLCA TCGA-GD-A6C6-01A 2 2 Out-of-frame Intra-chr q13.13 q13.13 Tumor suppressor gene 17383 ChimerSeq STARFusion TCGA_RNA-Seq METTL16-VPS53 METTL16 chr17 2415053 - VPS53 chr17 463813 - Exonic hg19 BLCA TCGA-DK-A1A6-01A 12 38 5'UTR-CDS Intra-chr p13.3 Tumor suppressor gene Seq+ 17384 ChimerSeq STARFusion TCGA_RNA-Seq LINC00482-SERINC2 LINC00482 chr17 79282985 - SERINC2 chr1 31905814 + Exonic hg19 BLCA TCGA-DK-A1A6-01A 6 8 3'UTR-CDS Inter-chr q25.3 p35.2 Seq+ 17385 ChimerSeq STARFusion TCGA_RNA-Seq STK3-MRPL48 STK3 chr8 99837743 - MRPL48 chr11 73516072 + Exonic hg19 BLCA TCGA-DK-A1A6-01A 4 12 Out-of-frame Inter-chr q22.2 q13.4 Seq+ 17386 ChimerSeq STARFusion TCGA_RNA-Seq SNRNP40-BAI2 SNRNP40 chr1 31740718 - BAI2 chr1 32210332 - Exonic hg19 BLCA TCGA-DK-A1A6-01A 4 8 Out-of-frame Intra-chr p35.2 Seq+ 17387 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-MYO9B VPS13B chr8 100205285 + MYO9B chr19 17322456 + Exonic hg19 BLCA TCGA-DK-A1A6-01A 2 9 Out-of-frame Inter-chr q22.2 p13.11 Seq+ 17388 ChimerSeq STARFusion TCGA_RNA-Seq MARK3-TRAF3 MARK3 chr14 103928798 + TRAF3 chr14 103336522 + Exonic hg19 BLCA TCGA-DK-A1A6-01A 2 2 CDS-5'UTR Intra-chr q32.32 CAMK:CAMKL q32.32 17389 ChimerSeq STARFusion TCGA_RNA-Seq MAN2B1-RTBDN MAN2B1 chr19 12760727 - RTBDN chr19 12937685 - Exonic hg19 BLCA TCGA-ZF-A9R9-01A 16 73 In-Frame Intra-chr p13.13 p13.13 Seq+ 17390 ChimerSeq STARFusion TCGA_RNA-Seq MAN2B1-RTBDN MAN2B1 chr19 12760918 - RTBDN chr19 12937685 - Exonic hg19 BLCA TCGA-ZF-A9R9-01A 5 73 In-Frame Intra-chr p13.13 p13.13 Seq+ 17391 ChimerSeq STARFusion TCGA_RNA-Seq LGR5-CNOT2 LGR5 chr12 71928966 + CNOT2 chr12 70747609 + Exonic hg19 BLCA TCGA-ZF-AA4U-01A 26 54 Out-of-frame Intra-chr q21.1 q15 Seq+ 17392 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D15-CPSF6 TBC1D15 chr12 72312328 + CPSF6 chr12 69663292 + Exonic hg19 BLCA TCGA-ZF-AA4U-01A 5 11 CDS-3'UTR Intra-chr q21.1 q15 Seq+ 17393 ChimerSeq STARFusion TCGA_RNA-Seq LGR5-PTPRR LGR5 chr12 71898465 + PTPRR chr12 71286757 - Exonic hg19 BLCA TCGA-ZF-AA4U-01A 2 11 Out-of-frame Intra-chr q21.1 q15 Seq+ 17394 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0430-IQCK KIAA0430 chr16 15724189 - IQCK chr16 19867809 + Exonic hg19 BLCA TCGA-BT-A2LB-01A 44 177 Out-of-frame Intra-chr p12.3 Seq+ 17395 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0430-IQCK KIAA0430 chr16 15725238 - IQCK chr16 19867809 + Exonic hg19 BLCA TCGA-BT-A2LB-01A 7 177 In-Frame Intra-chr p12.3 Seq+ 17396 ChimerSeq STARFusion TCGA_RNA-Seq MYO1E-FOXB1 MYO1E chr15 59664697 - FOXB1 chr15 60317955 + Exonic hg19 BLCA TCGA-5N-A9KM 9 9 CDS-3'UTR Intra-chr q22.2 q22.2 Transcription factor Seq+ 17397 ChimerSeq STARFusion TCGA_RNA-Seq DPP8-PARP16 DPP8 chr15 65766547 - PARP16 chr15 65540566 - Exonic hg19 BLCA TCGA-5N-A9KM 3 6 CDS-3'UTR Intra-chr q22.31 q22.31 Seq+ 17398 ChimerSeq STARFusion TCGA_RNA-Seq MSMO1-CPE MSMO1 chr4 166248916 + CPE chr4 166385542 + Exonic hg19 BLCA TCGA-CF-A1HR-01A 8 10 5'UTR-CDS Intra-chr q32.3 q32.3 Seq+ 17399 ChimerSeq STARFusion TCGA_RNA-Seq NUP85-ZDHHC18 NUP85 chr17 73229253 + ZDHHC18 chr1 27180217 + Exonic hg19 BLCA TCGA-CF-A1HR-01A 2 7 Out-of-frame Inter-chr q25.1 p36.11 Seq+ 17400 ChimerSeq STARFusion TCGA_RNA-Seq PTP4A2-ARFGEF2 PTP4A2 chr1 32403588 - ARFGEF2 chr20 47645067 + Exonic hg19 BLCA TCGA-5N-A9KI 2 13 5'UTR-CDS Inter-chr p35.2 q13.13 Seq+ 17401 ChimerSeq STARFusion TCGA_RNA-Seq GPR110-TNFRSF21 GPR110 chr6 46984353 - TNFRSF21 chr6 47221257 - Exonic hg19 BLCA TCGA-FD-A62P-01A 4 30 In-Frame Intra-chr p12.3 Seq+ 17402 ChimerSeq STARFusion TCGA_RNA-Seq HMGCS1-UNC13A HMGCS1 chr5 43292950 - UNC13A chr19 17756920 - Exonic hg19 BLCA TCGA-FD-A62P-01A 3 20 In-Frame Inter-chr p12 p13.11 Seq+ 17403 ChimerSeq STARFusion TCGA_RNA-Seq HMGCS1-UNC13A HMGCS1 chr5 43292576 - UNC13A chr19 17756920 - Exonic hg19 BLCA TCGA-FD-A62P-01A 2 20 Out-of-frame Inter-chr p12 p13.11 Seq+ 17404 ChimerSeq STARFusion TCGA_RNA-Seq ATP6AP1-OPN1LW ATP6AP1 chrX 153657520 + OPN1LW chrX 153421769 + Exonic hg19 BLCA TCGA-FD-A62P-01A 2 16 In-Frame Intra-chr q28 q28 Seq+ 17405 ChimerSeq STARFusion TCGA_RNA-Seq HSP90AB1-MRPL14 HSP90AB1 chr6 44214932 + MRPL14 chr6 44084366 - Exonic hg19 BLCA TCGA-FD-A62P-01A 2 6 5'UTR-5'UTR Intra-chr p21.1 Oncogene p21.1 Seq+ 17406 ChimerSeq STARFusion TCGA_RNA-Seq HOPX-SPINK2 HOPX chr4 57547421 - SPINK2 chr4 57686745 - Exonic hg19 BLCA TCGA-FD-A62P-01A 2 1 5'UTR-CDS Intra-chr q12 Tumor suppressor gene q12 17407 ChimerSeq STARFusion TCGA_RNA-Seq PHTF2-BET1 PHTF2 chr7 77539726 + BET1 chr7 93628606 - Exonic hg19 BLCA TCGA-BT-A20J-01A 5 14 Out-of-frame Intra-chr q11.23 q21.3 Seq+ 17408 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D4-TRAPPC12 TBC1D4 chr13 75884078 - TRAPPC12 chr2 3447550 + Exonic hg19 BLCA TCGA-BT-A20J-01A 3 17 In-Frame Inter-chr q22.2 Seq+ 17409 ChimerSeq STARFusion TCGA_RNA-Seq ACAP2-XXYLT1 ACAP2 chr3 195063200 - XXYLT1 chr3 194947585 - Exonic hg19 BLCA TCGA-BT-A20J-01A 5 7 In-Frame Intra-chr q29 q29 Seq+ 17410 ChimerSeq STARFusion TCGA_RNA-Seq C3-EXO5 C3 chr19 6677917 - EXO5 chr1 40980187 + Exonic hg19 BLCA TCGA-BT-A20J-01A 3 11 Out-of-frame Inter-chr p13.3 p34.2 Seq+ 17411 ChimerSeq STARFusion TCGA_RNA-Seq KBTBD2-COBL KBTBD2 chr7 32931148 - COBL chr7 51287641 - Exonic hg19 BLCA TCGA-BT-A20J-01A 5 2 5'UTR-CDS Intra-chr p14.3 p12.1 Seq+ 17412 ChimerSeq STARFusion TCGA_RNA-Seq SMAP2-NFYC SMAP2 chr1 40839895 + NFYC chr1 41204508 + Exonic hg19 BLCA TCGA-BT-A20J-01A 2 0 CDS-5'UTR Intra-chr p34.2 p34.2 Transcription factor 17413 ChimerSeq STARFusion TCGA_RNA-Seq MCM9-IGKJ1 MCM9 chr6 119238734 - IGKJ1 chr2 89161435 - Exonic hg19 BLCA TCGA-XF-A9T5 9 0 Out-of-frame Inter-chr q22.31 Tumor suppressor gene p11.2 Seq+ 17414 ChimerSeq STARFusion TCGA_RNA-Seq CNTNAP3-FRG1 CNTNAP3 chr9 39238990 - FRG1 chr4 190878553 + Exonic hg19 BLCA TCGA-XF-A9T4 14 154 In-Frame Inter-chr p12 17415 ChimerSeq STARFusion TCGA_RNA-Seq CNTNAP3-FRG1 CNTNAP3 chr9 39238990 - FRG1 chr4 190881903 + Exonic hg19 BLCA TCGA-XF-A9T4 2 154 In-Frame Inter-chr p12 17416 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC7-TEK ZCCHC7 chr9 37126939 + TEK chr9 27197313 + Exonic hg19 BLCA TCGA-XF-A9T4 10 60 In-Frame Intra-chr p13.2 p21.2 Seq+ 17417 ChimerSeq STARFusion TCGA_RNA-Seq CPT1A-GAL3ST3 CPT1A chr11 68609243 - GAL3ST3 chr11 65816620 - Exonic hg19 BLCA TCGA-XF-A9T4 12 12 5'UTR-5'UTR Intra-chr q13.3 q13.1 Seq+ 17418 ChimerSeq STARFusion TCGA_RNA-Seq MELK-DCTN3 MELK chr9 36573004 + DCTN3 chr9 34618757 - Exonic hg19 BLCA TCGA-XF-A9T4 2 8 5'UTR-CDS Intra-chr p13.2 CAMK:CAMKL p13.3 Seq+ 17419 ChimerSeq STARFusion TCGA_RNA-Seq FBXW7-ARHGAP10 FBXW7 chr4 153456093 - ARHGAP10 chr4 148993144 + Exonic hg19 BLCA TCGA-DK-A2HX-01A 4 32 5'UTR-CDS Intra-chr q31.3 Oncogene Tumor suppressor gene q31.23 Seq+ 17420 ChimerSeq STARFusion TCGA_RNA-Seq CFDP1-WWOX CFDP1 chr16 75428988 - WWOX chr16 79245505 + Exonic hg19 BLCA TCGA-XF-A9T0 22 53 Out-of-frame Intra-chr q23.1 q23.1 Tumor suppressor gene Seq+ 17421 ChimerSeq STARFusion TCGA_RNA-Seq AHR-TSPAN13 AHR chr7 17338953 + TSPAN13 chr7 16815836 + Exonic hg19 BLCA TCGA-XF-A9T0 17 36 Out-of-frame Intra-chr p21.1 Tumor suppressor gene Transcription factor p21.1 Tumor suppressor gene Seq+ 17422 ChimerSeq STARFusion TCGA_RNA-Seq RNF4-LOC402160 RNF4 chr4 2502465 + LOC402160 chr4 2438601 + Exonic hg19 BLCA TCGA-E5-A4TZ-01A 7 124 In-Frame Intra-chr p16.3 17423 ChimerSeq STARFusion TCGA_RNA-Seq FBXO31-ZNRF1 FBXO31 chr16 87393901 - ZNRF1 chr16 75127470 + Exonic hg19 BLCA TCGA-E5-A4TZ-01A 13 34 In-Frame Intra-chr q24.2 Tumor suppressor gene q23.1 Seq+ 17424 ChimerSeq STARFusion TCGA_RNA-Seq XPO6-FBXO31 XPO6 chr16 28222687 - FBXO31 chr16 87393972 - Exonic hg19 BLCA TCGA-E5-A4TZ-01A 2 30 Out-of-frame Intra-chr p12.1 q24.2 Tumor suppressor gene Seq+ 17425 ChimerSeq STARFusion TCGA_RNA-Seq FAT2-FUS FAT2 chr5 150917354 - FUS chr16 31199646 + Exonic hg19 BLCA TCGA-E5-A4TZ-01A 2 1 In-Frame Inter-chr q33.1 p11.2 Tumor suppressor gene 17426 ChimerSeq STARFusion TCGA_RNA-Seq POGZ-POC5 POGZ chr1 151413404 - POC5 chr5 74990656 - Exonic hg19 BLCA TCGA-E5-A4TZ-01A 2 1 Out-of-frame Inter-chr q21.3 q13.3 17427 ChimerSeq STARFusion TCGA_RNA-Seq PHF20-EPB41L1 PHF20 chr20 34430666 + EPB41L1 chr20 34800194 + Exonic hg19 BLCA TCGA-XF-AAMQ 4 38 In-Frame Intra-chr q11.22 Transcription factor q11.23 Seq+ 17428 ChimerSeq STARFusion TCGA_RNA-Seq PHF20-EPB41L1 PHF20 chr20 34435356 + EPB41L1 chr20 34800194 + Exonic hg19 BLCA TCGA-XF-AAMQ 3 37 Out-of-frame Intra-chr q11.22 Transcription factor q11.23 Seq+ 17429 ChimerSeq STARFusion TCGA_RNA-Seq SHANK2-ANO1 SHANK2 chr11 70331419 - ANO1 chr11 70003053 + Exonic hg19 BLCA TCGA-XF-AAMQ 4 9 In-Frame Intra-chr q13.4 q13.3 Seq+ 17430 ChimerSeq STARFusion TCGA_RNA-Seq ELMSAN1-NUBPL ELMSAN1 chr14 74253805 - NUBPL chr14 32068495 + Exonic hg19 BLCA TCGA-XF-AAMW 15 29 Out-of-frame Intra-chr q24.3 q12 Seq+ 17431 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57754549 + VMP1 chr17 57895073 + Exonic hg19 BLCA TCGA-XF-AAMW 10 41 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 17432 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPC-PAPOLA HNRNPC chr14 21732832 - PAPOLA chr14 97020821 + Exonic hg19 BLCA TCGA-XF-AAMW 6 54 Out-of-frame Intra-chr q11.2 q32.2 Seq+ 17433 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-TOM1 MYH9 chr22 36783852 - TOM1 chr22 35713870 + Exonic hg19 BLCA TCGA-XF-AAMW 5 39 5'UTR-5'UTR Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 17434 ChimerSeq STARFusion TCGA_RNA-Seq PCNX-FRMD6 PCNX chr14 71374720 + FRMD6 chr14 51956059 + Exonic hg19 BLCA TCGA-XF-AAMW 6 21 CDS-5'UTR Intra-chr q22.1 17435 ChimerSeq STARFusion TCGA_RNA-Seq SPECC1L-UPB1 SPECC1L chr22 24666951 + UPB1 chr22 24906717 + Exonic hg19 BLCA TCGA-XF-AAMW 4 19 5'UTR-CDS Intra-chr q11.23 q11.23 Seq+ 17436 ChimerSeq STARFusion TCGA_RNA-Seq ATG14-MED6 ATG14 chr14 55852577 - MED6 chr14 71051660 - Exonic hg19 BLCA TCGA-XF-AAMW 2 6 Out-of-frame Intra-chr q22.3 q24.2 Seq+ 17437 ChimerSeq STARFusion TCGA_RNA-Seq PPP4R4-MYH6 PPP4R4 chr14 94642464 + MYH6 chr14 23855340 - Exonic hg19 BLCA TCGA-XF-AAMW 2 6 Out-of-frame Intra-chr q32.12 q11.2 Seq+ 17438 ChimerSeq STARFusion TCGA_RNA-Seq PITPNB-RFPL3S PITPNB chr22 28292540 - RFPL3S chr22 32756826 - Exonic hg19 BLCA TCGA-XF-AAMW 2 5 Out-of-frame Intra-chr q12.1 q12.3 Seq+ 17439 ChimerSeq STARFusion TCGA_RNA-Seq C14orf93-TIMM9 C14orf93 chr14 23479310 - TIMM9 chr14 58878689 - Exonic hg19 BLCA TCGA-XF-AAMW 2 4 5'UTR-5'UTR Intra-chr q11.2 q23.1 Seq+ 17440 ChimerSeq STARFusion TCGA_RNA-Seq C1QTNF6-SYN3 C1QTNF6 chr22 37593643 - SYN3 chr22 33376687 - Exonic hg19 BLCA TCGA-XF-AAMW 2 4 5'UTR-CDS Intra-chr q12.3 q12.3 Seq+ 17441 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L1-PAPOLA SIPA1L1 chr14 71787898 + PAPOLA chr14 96986392 + Exonic hg19 BLCA TCGA-XF-AAMW 2 3 5'UTR-CDS Intra-chr q24.2 q32.2 Seq+ 17442 ChimerSeq STARFusion TCGA_RNA-Seq TFIP11-IL17RA TFIP11 chr22 26906030 - IL17RA chr22 17577952 + Exonic hg19 BLCA TCGA-XF-AAMW 2 2 Out-of-frame Intra-chr q12.1 q11.1 Seq+ 17443 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPUL1-CNN1 HNRNPUL1 chr19 41800591 + CNN1 chr19 11651891 + Exonic hg19 BLCA TCGA-XF-AAMT 9 26 In-Frame Intra-chr q13.2 p13.2 Tumor suppressor gene Seq+ 17444 ChimerSeq STARFusion TCGA_RNA-Seq RAB35-GCN1L1 RAB35 chr12 120546221 - GCN1L1 chr12 120587847 - Exonic hg19 BLCA TCGA-XF-AAMT 5 28 In-Frame Intra-chr q24.23 Seq+ 17445 ChimerSeq STARFusion TCGA_RNA-Seq MAST4-ST8SIA4 MAST4 chr5 66429474 + ST8SIA4 chr5 100192100 - Exonic hg19 BLCA TCGA-XF-AAMT 3 5 Out-of-frame Intra-chr q12.3 AGC:MAST q21.1 Seq+ 17446 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 BLCA TCGA-XF-AAMZ 115 307 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 17447 ChimerSeq STARFusion TCGA_RNA-Seq YWHAZ-GAL YWHAZ chr8 101964157 - GAL chr11 68452392 + Exonic hg19 BLCA TCGA-XF-AAMZ 23 127 5'UTR-5'UTR Inter-chr q22.3 q13.2 Seq+ 17448 ChimerSeq STARFusion TCGA_RNA-Seq YWHAZ-GAL YWHAZ chr8 101964157 - GAL chr11 68453062 + Exonic hg19 BLCA TCGA-XF-AAMZ 3 127 5'UTR-CDS Inter-chr q22.3 q13.2 Seq+ 17449 ChimerSeq STARFusion TCGA_RNA-Seq MYO10-PFDN2 MYO10 chr5 16711017 - PFDN2 chr1 161072165 - Exonic hg19 BLCA TCGA-XF-AAMZ 9 56 In-Frame Inter-chr p15.1 q23.3 Seq+ 17450 ChimerSeq STARFusion TCGA_RNA-Seq SAP30BP-MYO15B SAP30BP chr17 73667943 + MYO15B chr17 73615761 + Exonic hg19 BLCA TCGA-XF-AAMZ 2 9 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 17451 ChimerSeq STARFusion TCGA_RNA-Seq DEAF1-SH3GL1 DEAF1 chr11 686858 - SH3GL1 chr19 4366991 - Exonic hg19 BLCA TCGA-XF-AAMZ 2 1 In-Frame Inter-chr Transcription factor p13.3 Seq+ 17452 ChimerSeq STARFusion TCGA_RNA-Seq DRAM1-NUP107 DRAM1 chr12 102291708 + NUP107 chr12 69135593 + Exonic hg19 BLCA TCGA-GC-A3RD-01A 96 482 Out-of-frame Intra-chr q23.2 q15 Seq+ 17453 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-DRAM1 FRS2 chr12 69925836 + DRAM1 chr12 102291641 + Exonic hg19 BLCA TCGA-GC-A3RD-01A 94 219 5'UTR-CDS Intra-chr q15 q23.2 Seq+ 17454 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-NUP107 FRS2 chr12 69925836 + NUP107 chr12 69135593 + Exonic hg19 BLCA TCGA-GC-A3RD-01A 5 482 5'UTR-CDS Intra-chr q15 q15 Seq+ 17455 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-NUP107 FRS2 chr12 69931763 + NUP107 chr12 69135593 + Exonic hg19 BLCA TCGA-GC-A3RD-01A 5 482 5'UTR-CDS Intra-chr q15 q15 Seq+ 17456 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-DRAM1 FRS2 chr12 69931763 + DRAM1 chr12 102291641 + Exonic hg19 BLCA TCGA-GC-A3RD-01A 41 219 5'UTR-CDS Intra-chr q15 q23.2 Seq+ 17457 ChimerSeq STARFusion TCGA_RNA-Seq TSEN2-PPARG TSEN2 chr3 12538053 + PPARG chr3 12475397 + Exonic hg19 BLCA TCGA-GC-A3RD-01A 20 73 Out-of-frame Intra-chr p25.2 p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 17458 ChimerSeq STARFusion TCGA_RNA-Seq MGA-CDKN2A MGA chr15 42005694 + CDKN2A chr9 21968241 - Exonic hg19 BLCA TCGA-GC-A3RD-01A 17 49 In-Frame Inter-chr q15.1 Transcription factor p21.3 Oncogene Tumor suppressor gene Seq+ 17459 ChimerSeq STARFusion TCGA_RNA-Seq IRAK1-MECP2 IRAK1 chrX 153283457 - MECP2 chrX 153298008 - Exonic hg19 BLCA TCGA-GC-A3RD-01A 8 80 Out-of-frame Intra-chr q28 TKL:IRAK q28 Transcription factor Seq+ 17460 ChimerSeq STARFusion TCGA_RNA-Seq CPM-LYZ CPM chr12 69326458 - LYZ chr12 69743888 + Exonic hg19 BLCA TCGA-GC-A3RD-01A 5 36 In-Frame Intra-chr q15 q15 Seq+ 17461 ChimerSeq STARFusion TCGA_RNA-Seq GDPD1-SMG8 GDPD1 chr17 57298112 + SMG8 chr17 57292166 + Exonic hg19 BLCA TCGA-GC-A3RD-01A 6 28 Out-of-frame Intra-chr q22 q22 Seq+ 17462 ChimerSeq STARFusion TCGA_RNA-Seq PTPRR-CHPT1 PTPRR chr12 71286459 - CHPT1 chr12 102110506 + Exonic hg19 BLCA TCGA-GC-A3RD-01A 7 23 Out-of-frame Intra-chr q15 q23.2 Seq+ 17463 ChimerSeq STARFusion TCGA_RNA-Seq CPM-LYZ CPM chr12 69326458 - LYZ chr12 69746000 + Exonic hg19 BLCA TCGA-GC-A3RD-01A 2 36 In-Frame Intra-chr q15 q15 Seq+ 17464 ChimerSeq STARFusion TCGA_RNA-Seq HDAC1-PEPD HDAC1 chr1 32793278 + PEPD chr19 33904549 - Exonic hg19 BLCA TCGA-GC-A3RD-01A 2 10 Out-of-frame Inter-chr p35.2 Tumor suppressor gene q13.11 Seq+ 17465 ChimerSeq STARFusion TCGA_RNA-Seq GNPTAB-CNOT2 GNPTAB chr12 102173930 - CNOT2 chr12 70704675 + Exonic hg19 BLCA TCGA-GC-A3RD-01A 2 9 In-Frame Intra-chr q23.2 q15 Seq+ 17466 ChimerSeq STARFusion TCGA_RNA-Seq CDKN2A-MGA CDKN2A chr9 21970901 - MGA chr15 42019378 + Exonic hg19 BLCA TCGA-GC-A3RD-01A 2 3 In-Frame Inter-chr p21.3 Oncogene Tumor suppressor gene q15.1 Transcription factor Seq+ 17467 ChimerSeq STARFusion TCGA_RNA-Seq DHRS2-GSTM2 DHRS2 chr14 24105981 + GSTM2 chr1 110213909 + Exonic hg19 BLCA TCGA-GC-A3RD-01A 2 2 5'UTR-CDS Inter-chr q11.2 p13.3 17468 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1795770 + TACC3 chr4 1746245 + Exonic hg19 BLCA TCGA-XF-AAMX 6 354 Out-of-frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 17469 ChimerSeq STARFusion TCGA_RNA-Seq NUFIP2-VTN NUFIP2 chr17 27613010 - VTN chr17 26697291 - Exonic hg19 BLCA TCGA-XF-AAMX 6 11 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 17470 ChimerSeq STARFusion TCGA_RNA-Seq CAMSAP1-RABL6 CAMSAP1 chr9 138798846 - RABL6 chr9 139717977 + Exonic hg19 BLCA TCGA-XF-AAMX 2 26 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 17471 ChimerSeq STARFusion TCGA_RNA-Seq FOXK2-OGFOD3 FOXK2 chr17 80478183 + OGFOD3 chr17 80367286 - Exonic hg19 BLCA TCGA-XF-AAMX 2 16 Out-of-frame Intra-chr q25.3 Transcription factor q25.3 Seq+ 17472 ChimerSeq STARFusion TCGA_RNA-Seq UBTD2-SH3PXD2B UBTD2 chr5 171710600 - SH3PXD2B chr5 171752384 - Exonic hg19 BLCA TCGA-XF-AAMX 2 15 CDS-3'UTR Intra-chr q35.1 q35.1 Seq+ 17473 ChimerSeq STARFusion TCGA_RNA-Seq DCAF6-BCAS3 DCAF6 chr1 167992285 + BCAS3 chr17 58987893 + Exonic hg19 BLCA TCGA-XF-AAMX 3 9 Out-of-frame Inter-chr q24.2 q23.2 Seq+ 17474 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-FAM83F TNRC6B chr22 40441002 + FAM83F chr22 40415172 + Exonic hg19 BLCA TCGA-XF-AAMX 2 10 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 17475 ChimerSeq STARFusion TCGA_RNA-Seq ARL13B-EPHA6 ARL13B chr3 93722752 + EPHA6 chr3 96728848 + Exonic hg19 BLCA TCGA-XF-AAMX 2 4 CDS-5'UTR Intra-chr q11.1 q11.2 Seq+ 17476 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA5-PIK3C2G PLEKHA5 chr12 19489550 + PIK3C2G chr12 18715637 + Exonic hg19 BLCA TCGA-XF-AAMX 2 3 Out-of-frame Intra-chr p12.3 p12.3 Seq+ 17477 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM2-ZNF385A R3HDM2 chr12 57704047 - ZNF385A chr12 54769738 - Exonic hg19 BLCA TCGA-XF-AAMY 7 36 In-Frame Intra-chr q13.3 q13.13 Transcription factor Seq+ 17478 ChimerSeq STARFusion TCGA_RNA-Seq TSEN2-SYN2 TSEN2 chr3 12538053 + SYN2 chr3 12224812 + Exonic hg19 BLCA TCGA-XF-AAMY 5 10 Out-of-frame Intra-chr p25.2 p25.2 Seq+ 17479 ChimerSeq STARFusion TCGA_RNA-Seq CACNA1I-FBXW5 CACNA1I chr22 40078666 + FBXW5 chr9 139835623 - Exonic hg19 BLCA TCGA-XF-AAMY 2 6 Out-of-frame Inter-chr q13.1 q34.3 Seq+ 17480 ChimerSeq STARFusion TCGA_RNA-Seq ASH1L-UBQLN4 ASH1L chr1 155531944 - UBQLN4 chr1 156021648 - Exonic hg19 BLCA TCGA-XF-AAMY 2 4 5'UTR-CDS Intra-chr q22 Transcription factor q22 Seq+ 17481 ChimerSeq STARFusion TCGA_RNA-Seq GAS5-IFI16 GAS5 chr1 173835899 - IFI16 chr1 159002314 + Exonic hg19 BLCA TCGA-DK-A3X1-01A 161 1212 3'UTR-CDS Intra-chr q25.1 Tumor suppressor gene q23.1 Tumor suppressor gene Seq+ 17482 ChimerSeq STARFusion TCGA_RNA-Seq SLC2A9-RAD51 SLC2A9 chr4 10020599 - RAD51 chr15 40998375 + Exonic hg19 BLCA TCGA-DK-A3X1-01A 4 8 In-Frame Inter-chr p16.1 q15.1 Seq+ 17483 ChimerSeq STARFusion TCGA_RNA-Seq DHRS2-GSTM2 DHRS2 chr14 24105981 + GSTM2 chr1 110213909 + Exonic hg19 BLCA TCGA-DK-A3X1-01A 3 10 5'UTR-CDS Inter-chr q11.2 p13.3 17484 ChimerSeq STARFusion TCGA_RNA-Seq BCL2L1-FLJ43681 BCL2L1 chr20 30309458 - FLJ43681 chr17 81187693 + Exonic hg19 BLCA TCGA-DK-A3X1-01A 5 1 CDS-5'UTR Inter-chr q11.21 Oncogene Seq+ 17485 ChimerSeq STARFusion TCGA_RNA-Seq COL1A1-HSP90AB1 COL1A1 chr17 48262926 - HSP90AB1 chr6 44221383 + Exonic hg19 BLCA TCGA-DK-A3X1-01A 3 1 Out-of-frame Inter-chr q21.33 Oncogene p21.1 Oncogene Seq+ 17486 ChimerSeq STARFusion TCGA_RNA-Seq LRP8-RPL14 LRP8 chr1 53793534 - RPL14 chr3 40503521 + Exonic hg19 BLCA TCGA-DK-A3X1-01A 3 1 Out-of-frame Inter-chr p32.3 p22.1 17487 ChimerSeq STARFusion TCGA_RNA-Seq MRRF-NDUFA8 MRRF chr9 125027217 + NDUFA8 chr9 124906657 - Exonic hg19 BLCA TCGA-DK-A3X1-01A 3 1 5'UTR-CDS Intra-chr q33.2 q33.2 17488 ChimerSeq STARFusion TCGA_RNA-Seq JPH2-PXMP4 JPH2 chr20 42788258 - PXMP4 chr20 32302542 - Exonic hg19 BLCA TCGA-DK-A3X1-01A 2 2 In-Frame Intra-chr q13.12 q11.22 17489 ChimerSeq STARFusion TCGA_RNA-Seq MAN2B2-TACC3 MAN2B2 chr4 6580225 + TACC3 chr4 1737458 + Exonic hg19 BLCA TCGA-DK-A3IS-01A 15 51 Out-of-frame Intra-chr p16.1 p16.3 Seq+ 17490 ChimerSeq STARFusion TCGA_RNA-Seq PRDX5-LGR5 PRDX5 chr11 64088540 + LGR5 chr12 71977427 + Exonic hg19 BLCA TCGA-DK-A3IS-01A 4 9 Out-of-frame Inter-chr q13.1 q21.1 Seq+ 17491 ChimerSeq STARFusion TCGA_RNA-Seq ZFYVE28-TACC3 ZFYVE28 chr4 2420012 - TACC3 chr4 1741429 + Exonic hg19 BLCA TCGA-DK-A3IS-01A 3 6 In-Frame Intra-chr p16.3 p16.3 Seq+ 17492 ChimerSeq STARFusion TCGA_RNA-Seq SLC2A9-WDR1 SLC2A9 chr4 10020599 - WDR1 chr4 10090365 - Exonic hg19 BLCA TCGA-DK-A3IS-01A 3 3 In-Frame Intra-chr p16.1 p16.1 17493 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF2-S100A7 ARHGEF2 chr1 155948156 - S100A7 chr1 153431506 - Exonic hg19 BLCA TCGA-K4-A5RH-01A 149 593 CDS-5'UTR Intra-chr q22 q21.3 Seq+ 17494 ChimerSeq STARFusion TCGA_RNA-Seq CHTOP-S100A13 CHTOP chr1 153609129 + S100A13 chr1 153604716 - Exonic hg19 BLCA TCGA-K4-A5RH-01A 71 349 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 17495 ChimerSeq STARFusion TCGA_RNA-Seq MPRIP-TOM1L2 MPRIP chr17 16946285 + TOM1L2 chr17 17766162 - Exonic hg19 BLCA TCGA-K4-A5RH-01A 20 142 Out-of-frame Intra-chr p11.2 p11.2 Tumor suppressor gene Seq+ 17496 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF2-S100A7A ARHGEF2 chr1 155948156 - S100A7A chr1 153390542 + Exonic hg19 BLCA TCGA-K4-A5RH-01A 13 129 CDS-5'UTR Intra-chr q22 q21.3 Seq+ 17497 ChimerSeq STARFusion TCGA_RNA-Seq MPRIP-TOM1L2 MPRIP chr17 16946285 + TOM1L2 chr17 17754266 - Exonic hg19 BLCA TCGA-K4-A5RH-01A 9 142 In-Frame Intra-chr p11.2 p11.2 Tumor suppressor gene Seq+ 17498 ChimerSeq STARFusion TCGA_RNA-Seq MPRIP-TOM1L2 MPRIP chr17 16946285 + TOM1L2 chr17 17752173 - Exonic hg19 BLCA TCGA-K4-A5RH-01A 4 142 In-Frame Intra-chr p11.2 p11.2 Tumor suppressor gene Seq+ 17499 ChimerSeq STARFusion TCGA_RNA-Seq ASH1L-PKLR ASH1L chr1 155531944 - PKLR chr1 155271207 - Exonic hg19 BLCA TCGA-K4-A5RH-01A 11 56 5'UTR-5'UTR Intra-chr q22 Transcription factor q22 Seq+ 17500 ChimerSeq STARFusion TCGA_RNA-Seq SREBF1-MED9 SREBF1 chr17 17740041 - MED9 chr17 17394593 + Exonic hg19 BLCA TCGA-K4-A5RH-01A 9 31 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 17501 ChimerSeq STARFusion TCGA_RNA-Seq MPRIP-MED9 MPRIP chr17 16946285 + MED9 chr17 17394593 + Exonic hg19 BLCA TCGA-K4-A5RH-01A 5 19 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 17502 ChimerSeq STARFusion TCGA_RNA-Seq CABYR-OSBPL1A CABYR chr18 21723377 + OSBPL1A chr18 21819346 - Exonic hg19 BLCA TCGA-K4-A5RH-01A 2 12 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 17503 ChimerSeq STARFusion TCGA_RNA-Seq PI4KA-TTC39C PI4KA chr22 21107191 - TTC39C chr18 21694518 + Exonic hg19 BLCA TCGA-K4-A5RH-01A 2 2 Out-of-frame Inter-chr q11.21 q11.2 Seq+ 17504 ChimerSeq STARFusion TCGA_RNA-Seq TPM1-ALK TPM1 chr15 63354844 + ALK chr2 29446394 - Exonic hg19 BLCA TCGA-GV-A3QG-01A 121 357 In-Frame Inter-chr q22.2 p23.1 TK:ALK Oncogene Seq+ 17505 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2B-ERI3 GATAD2B chr1 153895209 - ERI3 chr1 44785416 - Exonic hg19 BLCA TCGA-BT-A20T-01A 2 6 5'UTR-CDS Intra-chr Transcription factor p34.1 Seq+ 17506 ChimerSeq STARFusion TCGA_RNA-Seq SYNRG-SHC2 SYNRG chr17 35945433 - SHC2 chr19 425231 - Exonic hg19 BLCA TCGA-XF-A8HC-01A 5 19 Out-of-frame Inter-chr p13.3 Seq+ 17507 ChimerSeq STARFusion TCGA_RNA-Seq FUBP3-EIF4E2 FUBP3 chr9 133455151 + EIF4E2 chr2 233428957 + Exonic hg19 BLCA TCGA-E7-A4XJ-01A 2 1 In-Frame Inter-chr q34.11 q37.1 17508 ChimerSeq STARFusion TCGA_RNA-Seq RWDD2B-MX2 RWDD2B chr21 30391532 - MX2 chr21 42762492 + Exonic hg19 BLCA TCGA-K4-A5RI-01A 5 26 Out-of-frame Intra-chr q21.3 q22.3 Seq+ 17509 ChimerSeq STARFusion TCGA_RNA-Seq RWDD2B-MX2 RWDD2B chr21 30391532 - MX2 chr21 42767514 + Exonic hg19 BLCA TCGA-K4-A5RI-01A 2 26 In-Frame Intra-chr q21.3 q22.3 Seq+ 17510 ChimerSeq STARFusion TCGA_RNA-Seq WDR62-HCST WDR62 chr19 36575646 + HCST chr19 36394253 + Exonic hg19 BLCA TCGA-BT-A3PH-01A 20 131 In-Frame Intra-chr q13.12 q13.12 Seq+ 17511 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R12C-IFITM10 PPP1R12C chr19 55610152 - IFITM10 chr11 1769349 - Exonic hg19 BLCA TCGA-BT-A3PH-01A 2 1 In-Frame Inter-chr q13.42 17512 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992064 + VMP1 chr17 57917129 + Exonic hg19 BLCA TCGA-4Z-AA7Q 21 84 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 17513 ChimerSeq STARFusion TCGA_RNA-Seq FOXJ3-CCDC23 FOXJ3 chr1 42693554 - CCDC23 chr1 43273171 - Exonic hg19 BLCA TCGA-4Z-AA7Q 12 68 In-Frame Intra-chr p34.2 Transcription factor Seq+ 17514 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-SPINK8 MAP4 chr3 48130263 - SPINK8 chr3 48351436 - Exonic hg19 BLCA TCGA-4Z-AA7Q 10 33 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 17515 ChimerSeq STARFusion TCGA_RNA-Seq NCK1-PCCB NCK1 chr3 136581161 + PCCB chr3 136002679 + Exonic hg19 BLCA TCGA-4Z-AA7Q 6 22 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 17516 ChimerSeq STARFusion TCGA_RNA-Seq PCYT1A-TCTEX1D2 PCYT1A chr3 196014486 - TCTEX1D2 chr3 196022940 - Exonic hg19 BLCA TCGA-4Z-AA7Q 9 10 5'UTR-CDS Intra-chr q29 q29 Seq+ 17517 ChimerSeq STARFusion TCGA_RNA-Seq NCK1-PCCB NCK1 chr3 136581195 + PCCB chr3 136002679 + Exonic hg19 BLCA TCGA-4Z-AA7Q 4 22 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 17518 ChimerSeq STARFusion TCGA_RNA-Seq C8orf76-ATAD2 C8orf76 chr8 124238740 - ATAD2 chr8 124335306 - Exonic hg19 BLCA TCGA-4Z-AA7Q 3 8 In-Frame Intra-chr q24.13 q24.13 Seq+ 17519 ChimerSeq STARFusion TCGA_RNA-Seq MLF1-RSRC1 MLF1 chr3 158310370 + RSRC1 chr3 158261124 + Exonic hg19 BLCA TCGA-4Z-AA7Q 3 8 In-Frame Intra-chr q25.32 q25.32 Seq+ 17520 ChimerSeq STARFusion TCGA_RNA-Seq CTNND1-TMX2 CTNND1 chr11 57584356 + TMX2 chr11 57505080 + Exonic hg19 BLCA TCGA-4Z-AA7Q 3 4 3'UTR-CDS Intra-chr q12.1 Tumor suppressor gene q12.1 Seq+ 17521 ChimerSeq STARFusion TCGA_RNA-Seq SKI-PRKCZ SKI chr1 2161174 + PRKCZ chr1 2087434 + Exonic hg19 BLCA TCGA-4Z-AA7Q 2 2 In-Frame Intra-chr p36.33 Transcription factor p36.33 Seq+ 17522 ChimerSeq STARFusion TCGA_RNA-Seq CHMP4C-ITGB1 CHMP4C chr8 82645051 + ITGB1 chr10 33190563 - Exonic hg19 BLCA TCGA-4Z-AA7Q 2 0 Out-of-frame Inter-chr q21.13 p11.22 Tumor suppressor gene Seq+ 17523 ChimerSeq STARFusion TCGA_RNA-Seq RAB3IP-CD63 RAB3IP chr12 70132811 + CD63 chr12 56120045 - Exonic hg19 BLCA TCGA-4Z-AA7S 158 597 5'UTR-CDS Intra-chr q15 q13.2 Seq+ 17524 ChimerSeq STARFusion TCGA_RNA-Seq CD63-OS9 CD63 chr12 56119597 - OS9 chr12 58109543 + Exonic hg19 BLCA TCGA-4Z-AA7S 80 368 In-Frame Intra-chr q13.2 q13.3 Seq+ 17525 ChimerSeq STARFusion TCGA_RNA-Seq PABPC1-VPS13B PABPC1 chr8 101716525 - VPS13B chr8 100779002 + Exonic hg19 BLCA TCGA-4Z-AA7S 69 164 3'UTR-CDS Intra-chr q22.3 q22.2 Seq+ 17526 ChimerSeq STARFusion TCGA_RNA-Seq PGAP3-MYOCD PGAP3 chr17 37840850 - MYOCD chr17 12639478 + Exonic hg19 BLCA TCGA-4Z-AA7S 6 83 Out-of-frame Intra-chr q12 Oncogene p12 Seq+ 17527 ChimerSeq STARFusion TCGA_RNA-Seq PGAP3-MYOCD PGAP3 chr17 37844087 - MYOCD chr17 12639478 + Exonic hg19 BLCA TCGA-4Z-AA7S 5 83 In-Frame Intra-chr q12 Oncogene p12 Seq+ 17528 ChimerSeq STARFusion TCGA_RNA-Seq DCAF12-EXOSC2 DCAF12 chr9 34087998 - EXOSC2 chr9 133574716 + Exonic hg19 BLCA TCGA-4Z-AA7S 5 23 3'UTR-CDS Intra-chr p13.3 q34.12 Seq+ 17529 ChimerSeq STARFusion TCGA_RNA-Seq RAB3IP-OS9 RAB3IP chr12 70132811 + OS9 chr12 58109543 + Exonic hg19 BLCA TCGA-4Z-AA7S 3 12 5'UTR-CDS Intra-chr q15 q13.3 Seq+ 17530 ChimerSeq STARFusion TCGA_RNA-Seq GPN1-LOC100130451 GPN1 chr2 27852819 + LOC100130451 chr2 214143255 - Exonic hg19 BLCA TCGA-FD-A3SS-01A 7 59 In-Frame Intra-chr p23.3 17531 ChimerSeq STARFusion TCGA_RNA-Seq GPN1-LOC100130451 GPN1 chr2 27852819 + LOC100130451 chr2 214141749 - Exonic hg19 BLCA TCGA-FD-A3SS-01A 4 59 CDS-3'UTR Intra-chr p23.3 17532 ChimerSeq STARFusion TCGA_RNA-Seq EXD2-CTSA EXD2 chr14 69658308 + CTSA chr20 44519812 + Exonic hg19 BLCA TCGA-FD-A3SS-01A 4 1 5'UTR-5'UTR Inter-chr q24.1 q13.12 17533 ChimerSeq STARFusion TCGA_RNA-Seq LIMK2-CDC45 LIMK2 chr22 31664186 + CDC45 chr22 19504050 + Exonic hg19 BLCA TCGA-DK-A3IN-01A 29 67 In-Frame Intra-chr q12.2 TKL:LISK q11.21 Seq+ 17534 ChimerSeq STARFusion TCGA_RNA-Seq GALNT18-IER3IP1 GALNT18 chr11 11454168 - IER3IP1 chr18 44683908 - Exonic hg19 BLCA TCGA-DK-A3IN-01A 13 36 Out-of-frame Inter-chr p15.4 q21.1 Seq+ 17535 ChimerSeq STARFusion TCGA_RNA-Seq TAPT1-LDB2 TAPT1 chr4 16227882 - LDB2 chr4 16597498 - Exonic hg19 BLCA TCGA-DK-A3IN-01A 3 10 In-Frame Intra-chr p15.32 p15.32 Seq+ 17536 ChimerSeq STARFusion TCGA_RNA-Seq CABIN1-GRIN2A CABIN1 chr22 24515665 + GRIN2A chr16 9984957 - Exonic hg19 BLCA TCGA-DK-A3IN-01A 2 6 Out-of-frame Inter-chr p13.2 Tumor suppressor gene Seq+ 17537 ChimerSeq STARFusion TCGA_RNA-Seq IKZF3-MED24 IKZF3 chr17 37985640 - MED24 chr17 38176186 - Exonic hg19 BLCA TCGA-FD-A3SL-01A 13 30 In-Frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Seq+ 17538 ChimerSeq STARFusion TCGA_RNA-Seq FAT1-LOC100144602 FAT1 chr4 187627717 - LOC100144602 chr4 66558827 + Exonic hg19 BLCA TCGA-FD-A3SL-01A 3 17 CDS-5'UTR Intra-chr q35.2 Tumor suppressor gene 17539 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPA1-SPINT2 HNRNPA1 chr12 54678081 + SPINT2 chr19 38755459 + Exonic hg19 BLCA TCGA-FD-A3SL-01A 3 2 Out-of-frame Inter-chr q13.13 q13.2 Tumor suppressor gene 17540 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPA1P10-SPINT2 HNRNPA1P10 chr12 54678081 + SPINT2 chr19 38755459 + Exonic hg19 BLCA TCGA-FD-A3SL-01A 3 2 Out-of-frame Inter-chr p13.2 q13.2 Tumor suppressor gene 17541 ChimerSeq STARFusion TCGA_RNA-Seq NPAS2-CNOT11 NPAS2 chr2 101565942 + CNOT11 chr2 101879001 + Exonic hg19 BLCA TCGA-DK-A3IK-01A 18 57 Out-of-frame Intra-chr q11.2 Tumor suppressor gene Transcription factor q11.2 Seq+ 17542 ChimerSeq STARFusion TCGA_RNA-Seq CYC1-SLC52A2 CYC1 chr8 145151647 + SLC52A2 chr8 145582844 + Exonic hg19 BLCA TCGA-DK-A3IK-01A 16 32 CDS-5'UTR Intra-chr q24.3 q24.3 Seq+ 17543 ChimerSeq STARFusion TCGA_RNA-Seq MED15-GNB1L MED15 chr22 20862033 + GNB1L chr22 19808898 - Exonic hg19 BLCA TCGA-DK-A3IK-01A 9 41 CDS-5'UTR Intra-chr q11.21 q11.21 Seq+ 17544 ChimerSeq STARFusion TCGA_RNA-Seq ATG2B-SLC22A17 ATG2B chr14 96782870 - SLC22A17 chr14 23816145 - Exonic hg19 BLCA TCGA-DK-A3IK-01A 4 50 Out-of-frame Intra-chr q32.2 q11.2 Seq+ 17545 ChimerSeq STARFusion TCGA_RNA-Seq ENTPD5-NUBPL ENTPD5 chr14 74436713 - NUBPL chr14 32295835 + Exonic hg19 BLCA TCGA-DK-A3IK-01A 8 19 Out-of-frame Intra-chr q24.3 q12 Seq+ 17546 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-WWP2 NFAT5 chr16 69689702 + WWP2 chr16 69921942 + Exonic hg19 BLCA TCGA-DK-A3IK-01A 8 13 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 17547 ChimerSeq STARFusion TCGA_RNA-Seq LTBP1-PLB1 LTBP1 chr2 33413918 + PLB1 chr2 28771727 + Exonic hg19 BLCA TCGA-DK-A3IK-01A 4 16 In-Frame Intra-chr p22.3 p23.2 Seq+ 17548 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-TMEM259 SBNO2 chr19 1147308 - TMEM259 chr19 1014472 - Exonic hg19 BLCA TCGA-DK-A3IK-01A 4 12 Out-of-frame Intra-chr p13.3 p13.3 17549 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K5-PERP MAP3K5 chr6 137112848 - PERP chr6 138417631 - Exonic hg19 BLCA TCGA-DK-A3IK-01A 4 10 In-Frame Intra-chr q23.3 STE:STE11 q23.3 Seq+ 17550 ChimerSeq STARFusion TCGA_RNA-Seq TOM1L2-SREBF1 TOM1L2 chr17 17875576 - SREBF1 chr17 17723835 - Exonic hg19 BLCA TCGA-DK-A3IK-01A 4 10 In-Frame Intra-chr p11.2 Tumor suppressor gene p11.2 Transcription factor Seq+ 17551 ChimerSeq STARFusion TCGA_RNA-Seq VWA8-TPTE2P5 VWA8 chr13 42439872 - TPTE2P5 chr13 41400730 - Exonic hg19 BLCA TCGA-DK-A3IK-01A 3 12 Out-of-frame Intra-chr q14.11 q14.11 Seq+ 17552 ChimerSeq STARFusion TCGA_RNA-Seq NOS1AP-LRRC52 NOS1AP chr1 162124266 + LRRC52 chr1 165532742 + Exonic hg19 BLCA TCGA-DK-A3IK-01A 3 10 Out-of-frame Intra-chr q23.3 q24.1 Seq+ 17553 ChimerSeq STARFusion TCGA_RNA-Seq RAP1B-NUP107 RAP1B chr12 69004823 + NUP107 chr12 69128488 + Exonic hg19 BLCA TCGA-DK-A3IK-01A 2 5 5'UTR-CDS Intra-chr q15 q15 Seq+ 17554 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF2-OCIAD2 RAPGEF2 chr4 160235920 + OCIAD2 chr4 48906628 - Exonic hg19 BLCA TCGA-FD-A3SR-01A 27 124 CDS-5'UTR Intra-chr q32.1 p11 Seq+ 17555 ChimerSeq STARFusion TCGA_RNA-Seq INPP4A-MGAT4A INPP4A chr2 99149958 + MGAT4A chr2 99242298 - Exonic hg19 BLCA TCGA-FD-A3SR-01A 6 95 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 17556 ChimerSeq STARFusion TCGA_RNA-Seq POLR2E-ZNF420 POLR2E chr19 1089471 - ZNF420 chr19 37618030 + Exonic hg19 BLCA TCGA-FD-A3SR-01A 9 32 3'UTR-CDS Intra-chr p13.3 q13.12 Transcription factor Seq+ 17557 ChimerSeq STARFusion TCGA_RNA-Seq IKBKB-UNC5D IKBKB chr8 42129723 + UNC5D chr8 35406810 + Exonic hg19 BLCA TCGA-FD-A3SR-01A 8 31 Out-of-frame Intra-chr p11.21 Oncogene p12 Tumor suppressor gene Seq+ 17558 ChimerSeq STARFusion TCGA_RNA-Seq ARRDC1-EHMT1 ARRDC1 chr9 140509452 + EHMT1 chr9 140611078 + Exonic hg19 BLCA TCGA-FD-A3SR-01A 2 7 In-Frame Intra-chr q34.3 q34.3 Seq+ 17559 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-SHANK2 PPFIA1 chr11 70118542 + SHANK2 chr11 70544868 - Exonic hg19 BLCA TCGA-4Z-AA7O 4 4 Out-of-frame Intra-chr q13.3 q13.4 Seq+ 17560 ChimerSeq STARFusion TCGA_RNA-Seq RBM4B-FCHSD2 RBM4B chr11 66444139 - FCHSD2 chr11 72726930 - Exonic hg19 BLCA TCGA-4Z-AA7O 2 9 Out-of-frame Intra-chr q13.2 q13.4 Seq+ 17561 ChimerSeq STARFusion TCGA_RNA-Seq DGUOK-ACTG2 DGUOK chr2 74177859 + ACTG2 chr2 74129487 + Exonic hg19 BLCA TCGA-BT-A3PJ-01A 20 88 In-Frame Intra-chr p13.1 p13.1 Seq+ 17562 ChimerSeq STARFusion TCGA_RNA-Seq RCOR1-TECPR2 RCOR1 chr14 103180954 + TECPR2 chr14 102963316 + Exonic hg19 BLCA TCGA-BT-A3PJ-01A 4 25 In-Frame Intra-chr q32.31 q32.31 Seq+ 17563 ChimerSeq STARFusion TCGA_RNA-Seq MYO9A-CELF6 MYO9A chr15 72410021 - CELF6 chr15 72582596 - Exonic hg19 BLCA TCGA-BT-A3PJ-01A 3 17 5'UTR-CDS Intra-chr q23 q23 Seq+ 17564 ChimerSeq STARFusion TCGA_RNA-Seq MYO9A-CELF6 MYO9A chr15 72410021 - CELF6 chr15 72597135 - Exonic hg19 BLCA TCGA-BT-A3PJ-01A 2 17 5'UTR-5'UTR Intra-chr q23 q23 Seq+ 17565 ChimerSeq STARFusion TCGA_RNA-Seq KRT5-SAT1 KRT5 chr12 52911374 - SAT1 chrX 23803445 + Exonic hg19 BLCA TCGA-BT-A3PJ-01A 2 1 Out-of-frame Inter-chr q13.13 p22.11 17566 ChimerSeq STARFusion TCGA_RNA-Seq LINC00673-SLC39A11 LINC00673 chr17 70588342 - SLC39A11 chr17 70732858 - Exonic hg19 BLCA TCGA-DK-A3IT-01A 3 10 Out-of-frame Intra-chr q25.1 17567 ChimerSeq STARFusion TCGA_RNA-Seq C6orf132-GUCA1B C6orf132 chr6 42077954 - GUCA1B chr6 42156469 - Exonic hg19 BLCA TCGA-DK-A3IT-01A 3 5 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 17568 ChimerSeq STARFusion TCGA_RNA-Seq PARL-ABCC5 PARL chr3 183602510 - ABCC5 chr3 183655848 - Exonic hg19 BLCA TCGA-DK-A3IT-01A 2 7 Out-of-frame Intra-chr q27.1 q27.1 Seq+ 17569 ChimerSeq STARFusion TCGA_RNA-Seq MTA2-HNRNPUL2 MTA2 chr11 62368094 - HNRNPUL2 chr11 62491898 - Exonic hg19 BLCA TCGA-DK-A3IT-01A 2 6 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 17570 ChimerSeq STARFusion TCGA_RNA-Seq SLC12A6-GOLGA8A SLC12A6 chr15 34628611 - GOLGA8A chr15 34683627 - Exonic hg19 BLCA TCGA-DK-A3IT-01A 3 2 CDS-3'UTR Intra-chr q14 q14 Seq+ 17571 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-CALR ACTB chr7 5567020 - CALR chr19 13050364 + Exonic hg19 BLCA TCGA-DK-A3IT-01A 3 1 Out-of-frame Inter-chr p22.1 p13.13 17572 ChimerSeq STARFusion TCGA_RNA-Seq LINC00649-ITSN1 LINC00649 chr21 35304046 + ITSN1 chr21 35201928 + Exonic hg19 BLCA TCGA-DK-A3IT-01A 2 5 Out-of-frame Intra-chr q22.11 q22.11 17573 ChimerSeq STARFusion TCGA_RNA-Seq DHRS2-GSTM2 DHRS2 chr14 24105981 + GSTM2 chr1 110213909 + Exonic hg19 BLCA TCGA-DK-A3IT-01A 2 3 5'UTR-CDS Inter-chr q11.2 p13.3 17574 ChimerSeq STARFusion TCGA_RNA-Seq STX8-MYOCD STX8 chr17 9471688 - MYOCD chr17 12608445 + Exonic hg19 BLCA TCGA-DK-A3IT-01A 2 1 Out-of-frame Intra-chr p13.1 p12 Seq+ 17575 ChimerSeq STARFusion TCGA_RNA-Seq TRPC4AP-MYH7B TRPC4AP chr20 33595353 - MYH7B chr20 33581137 + Exonic hg19 BLCA TCGA-DK-A3IV-01A 57 418 In-Frame Intra-chr q11.22 q11.22 Seq+ 17576 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-REM1 TPX2 chr20 30345385 + REM1 chr20 30070090 + Exonic hg19 BLCA TCGA-DK-A3IV-01A 12 30 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 17577 ChimerSeq STARFusion TCGA_RNA-Seq LCMT1-LOC100506655 LCMT1 chr16 25123317 + LOC100506655 chr16 25152179 - Exonic hg19 BLCA TCGA-DK-A3IV-01A 3 27 CDS-3'UTR Intra-chr p12.1 17578 ChimerSeq STARFusion TCGA_RNA-Seq VPS41-NPSR1 VPS41 chr7 38908746 - NPSR1 chr7 34851382 + Exonic hg19 BLCA TCGA-DK-A3IV-01A 3 23 In-Frame Intra-chr p14.1 p14.3 Seq+ 17579 ChimerSeq STARFusion TCGA_RNA-Seq ANLN-POU6F2 ANLN chr7 36483471 + POU6F2 chr7 39125460 + Exonic hg19 BLCA TCGA-DK-A3IV-01A 2 3 In-Frame Intra-chr p14.2 p14.1 Tumor suppressor gene Transcription factor Seq+ 17580 ChimerSeq STARFusion TCGA_RNA-Seq USP34-FAM161A USP34 chr2 61486846 - FAM161A chr2 62054393 - Exonic hg19 BLCA TCGA-BL-A13J-01A 3 43 In-Frame Intra-chr p15 p15 Seq+ 17581 ChimerSeq STARFusion TCGA_RNA-Seq B3GALTL-TEX26 B3GALTL chr13 31835219 + TEX26 chr13 31548983 + Exonic hg19 BLCA TCGA-BL-A13J-01A 5 34 Out-of-frame Intra-chr q12.3 17582 ChimerSeq STARFusion TCGA_RNA-Seq CCBP2-GTDC2 CCBP2 chr3 42851024 + GTDC2 chr3 43123028 - Exonic hg19 BLCA TCGA-BL-A13J-01A 5 28 Out-of-frame Intra-chr 17583 ChimerSeq STARFusion TCGA_RNA-Seq CCBP2-GTDC2 CCBP2 chr3 42861203 + GTDC2 chr3 43123028 - Exonic hg19 BLCA TCGA-BL-A13J-01A 3 28 Out-of-frame Intra-chr 17584 ChimerSeq STARFusion TCGA_RNA-Seq DENND4C-ACER2 DENND4C chr9 19230831 + ACER2 chr9 19446279 + Exonic hg19 BLCA TCGA-BL-A13J-01A 10 0 5'UTR-CDS Intra-chr p22.1 p22.1 Seq+ 17585 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-LOC100507412 NIPBL chr5 36877280 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BLCA TCGA-UY-A9PE-01A 22 86 5'UTR-5'UTR Inter-chr p13.2 17586 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-LOC100507412 NIPBL chr5 36877280 + LOC100507412 chrUn_gl000220 121829 + Exonic hg19 BLCA TCGA-UY-A9PE-01A 3 86 5'UTR-5'UTR Inter-chr p13.2 17587 ChimerSeq STARFusion TCGA_RNA-Seq PPIF-SNX31 PPIF chr10 81111339 + SNX31 chr8 101648239 - Exonic hg19 BLCA TCGA-UY-A9PE-01A 10 51 Out-of-frame Inter-chr q22.3 q22.3 Seq+ 17588 ChimerSeq STARFusion TCGA_RNA-Seq APEX1-TMEM55B APEX1 chr14 20924868 + TMEM55B chr14 20926728 - Exonic hg19 BLCA TCGA-UY-A9PE-01A 12 20 Out-of-frame Intra-chr q11.2 Oncogene q11.2 17589 ChimerSeq STARFusion TCGA_RNA-Seq INTS3-S100A9 INTS3 chr1 153734152 + S100A9 chr1 153330745 + Exonic hg19 BLCA TCGA-UY-A9PE-01A 3 22 CDS-5'UTR Intra-chr q21.3 q21.3 17590 ChimerSeq STARFusion TCGA_RNA-Seq SMARCB1-SNW1 SMARCB1 chr22 24129449 + SNW1 chr14 78201355 - Exonic hg19 BLCA TCGA-UY-A9PE-01A 4 15 In-Frame Inter-chr q11.23 Oncogene Tumor suppressor gene q24.3 Seq+ 17591 ChimerSeq STARFusion TCGA_RNA-Seq CCDC88C-C14orf159 CCDC88C chr14 91760517 - C14orf159 chr14 91681749 + Exonic hg19 BLCA TCGA-UY-A9PE-01A 2 12 Out-of-frame Intra-chr q32.12 q32.11 Seq+ 17592 ChimerSeq STARFusion TCGA_RNA-Seq CERS6-PSMD14 CERS6 chr2 169574488 + PSMD14 chr2 162223989 + Exonic hg19 BLCA TCGA-UY-A9PE-01A 2 3 Out-of-frame Intra-chr q24.3 q24.2 Seq+ 17593 ChimerSeq STARFusion TCGA_RNA-Seq EPSTI1-DNAJC15 EPSTI1 chr13 43491677 - DNAJC15 chr13 43681314 + Exonic hg19 BLCA TCGA-DK-A3IU-01A 2 3 Out-of-frame Intra-chr q14.11 q14.11 Seq+ 17594 ChimerSeq STARFusion TCGA_RNA-Seq ARIH2-RHOA ARIH2 chr3 48960244 + RHOA chr3 49413024 - Exonic hg19 BLCA TCGA-FD-A3B8-01A 4 24 5'UTR-5'UTR Intra-chr p21.31 p21.31 Oncogene Tumor suppressor gene Seq+ 17595 ChimerSeq STARFusion TCGA_RNA-Seq UBE2N-LOC643339 UBE2N chr12 93835631 - LOC643339 chr12 93721831 - Exonic hg19 BLCA TCGA-FD-A3B8-01A 4 4 CDS-3'UTR Intra-chr q22 17596 ChimerSeq STARFusion TCGA_RNA-Seq IP6K1-RHOA IP6K1 chr3 49785251 - RHOA chr3 49413024 - Exonic hg19 BLCA TCGA-CU-A72E-01A 51 157 CDS-5'UTR Intra-chr p21.31 p21.31 Oncogene Tumor suppressor gene Seq+ 17597 ChimerSeq STARFusion TCGA_RNA-Seq RPS14-MB21D2 RPS14 chr5 149826365 - MB21D2 chr3 192517439 - Exonic hg19 BLCA TCGA-CU-A72E-01A 5 9 Out-of-frame Inter-chr q33.1 q29 Seq+ 17598 ChimerSeq STARFusion TCGA_RNA-Seq POLR2J3-ORC5 POLR2J3 chr7 102207444 - ORC5 chr7 103777340 - Exonic hg19 BLCA TCGA-H4-A2HQ-01A 4 16 3'UTR-CDS Intra-chr q22.1 q22.2 Seq+ 17599 ChimerSeq STARFusion TCGA_RNA-Seq WWOX-NUDT7 WWOX chr16 78458952 + NUDT7 chr16 77775479 + Exonic hg19 BLCA TCGA-H4-A2HQ-01A 4 5 Out-of-frame Intra-chr q23.1 Tumor suppressor gene q23.1 Seq+ 17600 ChimerSeq STARFusion TCGA_RNA-Seq RASSF8-CMAS RASSF8 chr12 26112081 + CMAS chr12 22215215 + Exonic hg19 BLCA TCGA-ZF-A9R3-01A 6 28 5'UTR-CDS Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 17601 ChimerSeq STARFusion TCGA_RNA-Seq KIF1B-NF1 KIF1B chr1 10403345 + NF1 chr17 29683478 + Exonic hg19 BLCA TCGA-ZF-A9R3-01A 3 16 In-Frame Inter-chr p36.22 Tumor suppressor gene q11.2 Oncogene Tumor suppressor gene Seq+ 17602 ChimerSeq STARFusion TCGA_RNA-Seq DHRS2-GSTM2 DHRS2 chr14 24105981 + GSTM2 chr1 110213909 + Exonic hg19 BLCA TCGA-ZF-A9R3-01A 3 12 5'UTR-CDS Inter-chr q11.2 p13.3 17603 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-HM13 TPX2 chr20 30327424 + HM13 chr20 30115287 + Exonic hg19 BLCA TCGA-GC-A3I6-01A 310 841 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 17604 ChimerSeq STARFusion TCGA_RNA-Seq HM13-BCL2L1 HM13 chr20 30126064 + BCL2L1 chr20 30253889 - Exonic hg19 BLCA TCGA-GC-A3I6-01A 11 76 Out-of-frame Intra-chr q11.21 q11.21 Oncogene Seq+ 17605 ChimerSeq STARFusion TCGA_RNA-Seq HM13-BCL2L1 HM13 chr20 30115385 + BCL2L1 chr20 30253889 - Exonic hg19 BLCA TCGA-GC-A3I6-01A 4 76 In-Frame Intra-chr q11.21 q11.21 Oncogene Seq+ 17606 ChimerSeq STARFusion TCGA_RNA-Seq RIMS2-BAALC RIMS2 chr8 104513290 + BAALC chr8 104240217 + Exonic hg19 BLCA TCGA-GC-A3I6-01A 6 22 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 17607 ChimerSeq STARFusion TCGA_RNA-Seq RIMS2-BAALC RIMS2 chr8 104513290 + BAALC chr8 104225147 + Exonic hg19 BLCA TCGA-GC-A3I6-01A 5 22 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 17608 ChimerSeq STARFusion TCGA_RNA-Seq BCL2L1-COX4I2 BCL2L1 chr20 30309458 - COX4I2 chr20 30227736 + Exonic hg19 BLCA TCGA-GC-A3I6-01A 2 7 Out-of-frame Intra-chr q11.21 Oncogene q11.21 17609 ChimerSeq STARFusion TCGA_RNA-Seq MAPRE1-UQCC MAPRE1 chr20 31413854 + UQCC chr20 33935075 - Exonic hg19 BLCA TCGA-YC-A89H-01A 11 23 Out-of-frame Intra-chr q11.21 Seq+ 17610 ChimerSeq STARFusion TCGA_RNA-Seq ANXA8L2-LINC00842 ANXA8L2 chr10 47747132 + LINC00842 chr10 47099714 - Exonic hg19 BLCA TCGA-YC-A89H-01A 2 3 Out-of-frame Intra-chr 17611 ChimerSeq STARFusion TCGA_RNA-Seq LIMCH1-CWH43 LIMCH1 chr4 41526495 + CWH43 chr4 49030646 + Exonic hg19 BLCA TCGA-CU-A5W6-01A 3 13 In-Frame Intra-chr p13 p11 Seq+ 17612 ChimerSeq STARFusion TCGA_RNA-Seq RHPN2-PEPD RHPN2 chr19 33535155 - PEPD chr19 33904549 - Exonic hg19 BLCA TCGA-GV-A3QF-01A 37 112 In-Frame Intra-chr q13.11 q13.11 Seq+ 17613 ChimerSeq STARFusion TCGA_RNA-Seq TAF4-LAMA5 TAF4 chr20 60639507 - LAMA5 chr20 60885367 - Exonic hg19 BLCA TCGA-GV-A3QF-01A 24 111 In-Frame Intra-chr q13.33 Seq+ 17614 ChimerSeq STARFusion TCGA_RNA-Seq TK1-DNAH17 TK1 chr17 76171131 - DNAH17 chr17 76423189 - Exonic hg19 BLCA TCGA-GV-A3QF-01A 2 32 In-Frame Intra-chr q25.3 q25.3 Seq+ 17615 ChimerSeq STARFusion TCGA_RNA-Seq ACOT7-DNAJC11 ACOT7 chr1 6378552 - DNAJC11 chr1 6727870 - Exonic hg19 BLCA TCGA-GV-A3QF-01A 2 6 Out-of-frame Intra-chr p36.31 p36.31 Tumor suppressor gene Seq+ 17616 ChimerSeq STARFusion TCGA_RNA-Seq DENND5A-NEGR1 DENND5A chr11 9286508 - NEGR1 chr1 72241980 - Exonic hg19 BLCA TCGA-GV-A3QF-01A 3 2 In-Frame Inter-chr p15.4 p31.1 17617 ChimerSeq STARFusion TCGA_RNA-Seq CHD2-LOC100507217 CHD2 chr15 93444529 + LOC100507217 chr15 93428745 + Exonic hg19 BLCA TCGA-GV-A3QF-01A 2 2 CDS-5'UTR Intra-chr q26.1 17618 ChimerSeq STARFusion TCGA_RNA-Seq EPN2-MAP2K3 EPN2 chr17 19140844 + MAP2K3 chr17 21201725 + Exonic hg19 BLCA TCGA-K4-A4AC-01A 18 55 5'UTR-5'UTR Intra-chr p11.2 p11.2 STE:STE7 Seq+ 17619 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-C8orf56 VPS13B chr8 100454863 + C8orf56 chr8 104145597 - Exonic hg19 BLCA TCGA-K4-A4AC-01A 13 72 CDS-3'UTR Intra-chr q22.2 Seq+ 17620 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A1-CDX2 SLC7A1 chr13 30127898 - CDX2 chr13 28539152 - Exonic hg19 BLCA TCGA-K4-A4AC-01A 12 73 5'UTR-CDS Intra-chr q12.3 q12.2 Tumor suppressor gene Transcription factor Seq+ 17621 ChimerSeq STARFusion TCGA_RNA-Seq RARG-KRT8 RARG chr12 53624953 - KRT8 chr12 53298811 - Exonic hg19 BLCA TCGA-K4-A4AC-01A 7 42 5'UTR-5'UTR Intra-chr q13.13 Transcription factor q13.13 Seq+ 17622 ChimerSeq STARFusion TCGA_RNA-Seq STXBP3-GPR61 STXBP3 chr1 109342927 + GPR61 chr1 110087933 + Exonic hg19 BLCA TCGA-K4-A4AC-01A 3 6 CDS-3'UTR Intra-chr p13.3 p13.3 Seq+ 17623 ChimerSeq STARFusion TCGA_RNA-Seq RABGEF1-TYW1 RABGEF1 chr7 66205779 + TYW1 chr7 66514936 + Exonic hg19 BLCA TCGA-K4-A4AC-01A 2 1 5'UTR-CDS Intra-chr q11.21 q11.21 17624 ChimerSeq STARFusion TCGA_RNA-Seq TACC1-RAB11FIP1 TACC1 chr8 38682886 + RAB11FIP1 chr8 37720631 - Exonic hg19 BLCA TCGA-K4-A6FZ-01A 4 5 In-Frame Intra-chr p11.22 p11.23 Seq+ 17625 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-EIF3K ACTN4 chr19 39138547 + EIF3K chr19 39123070 + Exonic hg19 BLCA TCGA-E7-A541-01A 51 368 In-Frame Intra-chr Seq+ 17626 ChimerSeq STARFusion TCGA_RNA-Seq PAIP2-UBE2D2 PAIP2 chr5 138677669 + UBE2D2 chr5 138979957 + Exonic hg19 BLCA TCGA-E7-A541-01A 7 39 5'UTR-5'UTR Intra-chr q31.2 Tumor suppressor gene q31.2 Seq+ 17627 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-FOXRED2 MYH9 chr22 36737415 - FOXRED2 chr22 36894203 - Exonic hg19 BLCA TCGA-E7-A541-01A 8 10 In-Frame Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Seq+ 17628 ChimerSeq STARFusion TCGA_RNA-Seq NOS1AP-AHI1 NOS1AP chr1 162124266 + AHI1 chr6 135679325 - Exonic hg19 BLCA TCGA-E7-A541-01A 3 7 Out-of-frame Inter-chr q23.3 q23.3 Seq+ 17629 ChimerSeq STARFusion TCGA_RNA-Seq ZNF37A-IPP ZNF37A chr10 38385560 + IPP chr1 46165862 - Exonic hg19 BLCA TCGA-E7-A541-01A 3 7 In-Frame Inter-chr p11.1 Transcription factor p34.1 17630 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL9-CERS5 OSBPL9 chr1 52179751 + CERS5 chr12 50537840 - Exonic hg19 BLCA TCGA-E7-A541-01A 2 4 Out-of-frame Inter-chr p32.3 q13.12 Seq+ 17631 ChimerSeq STARFusion TCGA_RNA-Seq ZNF322-KIF6 ZNF322 chr6 26658786 - KIF6 chr6 39398937 - Exonic hg19 BLCA TCGA-E7-A541-01A 2 1 5'UTR-CDS Intra-chr p22.2 Transcription factor p21.2 Seq+ 17632 ChimerSeq STARFusion TCGA_RNA-Seq E2F3-CDKAL1 E2F3 chr6 20404063 + CDKAL1 chr6 20955650 + Exonic hg19 BLCA TCGA-YC-A9TC 4 5 Out-of-frame Intra-chr p22.3 Tumor suppressor gene Transcription factor p22.3 17633 ChimerSeq STARFusion TCGA_RNA-Seq VEGFA-HIST1H4H VEGFA chr6 43746655 + HIST1H4H chr6 26281815 - Exonic hg19 BLCA TCGA-XF-AAMG 11 63 CDS-3'UTR Intra-chr p21.1 Tumor suppressor gene p22.2 Seq+ 17634 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN13-BZW2 TSPAN13 chr7 16793655 + BZW2 chr7 16734459 + Exonic hg19 BLCA TCGA-XF-AAMG 14 20 In-Frame Intra-chr p21.1 Tumor suppressor gene p21.1 Seq+ 17635 ChimerSeq STARFusion TCGA_RNA-Seq VEGFA-HIST1H4H VEGFA chr6 43749824 + HIST1H4H chr6 26281815 - Exonic hg19 BLCA TCGA-XF-AAMG 3 63 CDS-3'UTR Intra-chr p21.1 Tumor suppressor gene p22.2 Seq+ 17636 ChimerSeq STARFusion TCGA_RNA-Seq WDR48-HERC2 WDR48 chr3 39093564 + HERC2 chr15 28397976 - Exonic hg19 BLCA TCGA-XF-AAMG 5 5 In-Frame Inter-chr p22.2 Tumor suppressor gene Seq+ 17637 ChimerSeq STARFusion TCGA_RNA-Seq PARP8-KBTBD2 PARP8 chr5 50111358 + KBTBD2 chr7 32919554 - Exonic hg19 BLCA TCGA-XF-AAMG 2 1 CDS-5'UTR Inter-chr q11.1 p14.3 17638 ChimerSeq STARFusion TCGA_RNA-Seq PPP6C-SCAI PPP6C chr9 127933364 - SCAI chr9 127818286 - Exonic hg19 BLCA TCGA-XF-AAMG 2 1 Out-of-frame Intra-chr q33.3 q33.3 17639 ChimerSeq STARFusion TCGA_RNA-Seq PFDN2-DEDD PFDN2 chr1 161087742 - DEDD chr1 161094316 - Exonic hg19 BLCA TCGA-FD-A5BZ-01A 29 112 CDS-5'UTR Intra-chr q23.3 q23.3 Seq+ 17640 ChimerSeq STARFusion TCGA_RNA-Seq REV1-LYG2 REV1 chr2 100078958 - LYG2 chr2 99863283 - Exonic hg19 BLCA TCGA-FD-A5BZ-01A 2 14 In-Frame Intra-chr q11.2 q11.2 Seq+ 17641 ChimerSeq STARFusion TCGA_RNA-Seq REV1-LYG1 REV1 chr2 100078958 - LYG1 chr2 99901283 - Exonic hg19 BLCA TCGA-FD-A5BZ-01A 2 10 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 17642 ChimerSeq STARFusion TCGA_RNA-Seq ALCAM-SH3KBP1 ALCAM chr3 105086325 + SH3KBP1 chrX 19606920 - Exonic hg19 BLCA TCGA-GV-A3QH-01A 16 93 In-Frame Inter-chr q13.11 p22.12 Seq+ 17643 ChimerSeq STARFusion TCGA_RNA-Seq ALCAM-SH3KBP1 ALCAM chr3 105086325 + SH3KBP1 chrX 19587306 - Exonic hg19 BLCA TCGA-GV-A3QH-01A 2 93 Out-of-frame Inter-chr q13.11 p22.12 Seq+ 17644 ChimerSeq STARFusion TCGA_RNA-Seq MBOAT1-DCDC2 MBOAT1 chr6 20126748 - DCDC2 chr6 24302272 - Exonic hg19 BLCA TCGA-GV-A3QH-01A 12 46 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 17645 ChimerSeq STARFusion TCGA_RNA-Seq CLOCK-UGT2A3 CLOCK chr4 56412949 - UGT2A3 chr4 69798477 - Exonic hg19 BLCA TCGA-GV-A3QH-01A 16 16 5'UTR-CDS Intra-chr q12 Transcription factor Seq+ 17646 ChimerSeq STARFusion TCGA_RNA-Seq USP38-IL17F USP38 chr4 144119077 + IL17F chr6 52101966 - Exonic hg19 BLCA TCGA-GV-A3QH-01A 15 18 Out-of-frame Inter-chr q31.21 p12.2 Seq+ 17647 ChimerSeq STARFusion TCGA_RNA-Seq ABCD3-ARHGAP29 ABCD3 chr1 94884144 + ARHGAP29 chr1 94685948 - Exonic hg19 BLCA TCGA-GV-A3QH-01A 6 22 Out-of-frame Intra-chr p21.3 p22.1 Tumor suppressor gene Seq+ 17648 ChimerSeq STARFusion TCGA_RNA-Seq CLOCK-UGT2A3 CLOCK chr4 56412949 - UGT2A3 chr4 69809096 - Exonic hg19 BLCA TCGA-GV-A3QH-01A 2 16 5'UTR-3'UTR Intra-chr q12 Transcription factor Seq+ 17649 ChimerSeq STARFusion TCGA_RNA-Seq CLOCK-UGT2A3 CLOCK chr4 56412949 - UGT2A3 chr4_ctg9_hap1 510728 - Exonic hg19 BLCA TCGA-GV-A3QH-01A 2 11 5'UTR-3'UTR Inter-chr q12 Transcription factor Seq+ 17650 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP29-MID2 ARHGAP29 chr1 94702971 - MID2 chrX 107147188 + Exonic hg19 BLCA TCGA-GV-A3QH-01A 2 8 5'UTR-CDS Inter-chr p22.1 Tumor suppressor gene q22.3 Seq+ 17651 ChimerSeq STARFusion TCGA_RNA-Seq ANAPC10-SMAD1 ANAPC10 chr4 145985724 - SMAD1 chr4 146460956 + Exonic hg19 BLCA TCGA-GV-A3QH-01A 2 1 Out-of-frame Intra-chr q31.21 q31.21 Transcription factor 17652 ChimerSeq STARFusion TCGA_RNA-Seq ZNF267-AGBL4 ZNF267 chr16 31885290 + AGBL4 chr1 49332902 - Exonic hg19 BLCA TCGA-CU-A3QU-01A 3 10 In-Frame Inter-chr p11.2 Transcription factor p33 Seq+ 17653 ChimerSeq STARFusion TCGA_RNA-Seq SGTA-ACTG1 SGTA chr19 2783231 - ACTG1 chr17 79479386 - Exonic hg19 BLCA TCGA-CU-A3QU-01A 2 2 5'UTR-5'UTR Inter-chr p13.3 q25.3 17654 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-C3orf70 IGH@ chr14 106134590 - C3orf70 chr3 184870614 - Exonic hg19 BLCA TCGA-XF-AAME 4 1 Out-of-frame Inter-chr 32.33 q27.2 17655 ChimerSeq STARFusion TCGA_RNA-Seq SNX27-THEM4 SNX27 chr1 151584988 + THEM4 chr1 151849601 - Exonic hg19 BLCA TCGA-ZF-AA4R-01A 31 30 In-Frame Intra-chr q21.3 q21.3 Seq+ 17656 ChimerSeq STARFusion TCGA_RNA-Seq ADRBK2-RHBDL3 ADRBK2 chr22 25961120 + RHBDL3 chr17 30611678 + Exonic hg19 BLCA TCGA-FD-A43P-01A 7 54 Out-of-frame Inter-chr q11.2 Seq+ 17657 ChimerSeq STARFusion TCGA_RNA-Seq ADRBK2-RHBDL3 ADRBK2 chr22 25961120 + RHBDL3 chr17 30615811 + Exonic hg19 BLCA TCGA-FD-A43P-01A 5 54 Out-of-frame Inter-chr q11.2 Seq+ 17658 ChimerSeq STARFusion TCGA_RNA-Seq C6orf203-PDSS2 C6orf203 chr6 107361434 + PDSS2 chr6 107475981 - Exonic hg19 BLCA TCGA-FD-A43P-01A 5 35 Out-of-frame Intra-chr q21 q21 Tumor suppressor gene Seq+ 17659 ChimerSeq STARFusion TCGA_RNA-Seq C6orf203-PDSS2 C6orf203 chr6 107349475 + PDSS2 chr6 107475981 - Exonic hg19 BLCA TCGA-FD-A43P-01A 2 35 5'UTR-CDS Intra-chr q21 q21 Tumor suppressor gene Seq+ 17660 ChimerSeq STARFusion TCGA_RNA-Seq FAM189A1-GABRG3 FAM189A1 chr15 29544572 - GABRG3 chr15 27571956 + Exonic hg19 BLCA TCGA-FD-A43P-01A 2 14 In-Frame Intra-chr q12 Seq+ 17661 ChimerSeq STARFusion TCGA_RNA-Seq FAM189A1-GABRG3 FAM189A1 chr15 29488634 - GABRG3 chr15 27571956 + Exonic hg19 BLCA TCGA-FD-A43P-01A 2 14 In-Frame Intra-chr q12 Seq+ 17662 ChimerSeq STARFusion TCGA_RNA-Seq TLK2-THRA TLK2 chr17 60613698 + THRA chr17 38240088 + Exonic hg19 BLCA TCGA-FD-A43P-01A 4 4 In-Frame Intra-chr q23.2 Other:TLK q21.1 Tumor suppressor gene Transcription factor Seq+ 17663 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-ZMYND8 BCAS3 chr17 59161925 + ZMYND8 chr20 45891172 - Exonic hg19 BLCA TCGA-FD-A43P-01A 2 4 In-Frame Inter-chr q23.2 q13.12 Seq+ 17664 ChimerSeq STARFusion TCGA_RNA-Seq MGC2752-TRIM28 MGC2752 chr19 59086955 + TRIM28 chr19 59058743 + Exonic hg19 BLCA TCGA-ZF-A9R0-01A 2 4 Out-of-frame Intra-chr q13.43 17665 ChimerSeq STARFusion TCGA_RNA-Seq FSCN1-EIF2AK1 FSCN1 chr7 5633399 + EIF2AK1 chr7 6066592 - Exonic hg19 BLCA TCGA-DK-A6B5-01A 235 486 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 17666 ChimerSeq STARFusion TCGA_RNA-Seq RAF1-NXPH1 RAF1 chr3 12705312 - NXPH1 chr7 8790638 + Exonic hg19 BLCA TCGA-DK-A6B5-01A 13 41 5'UTR-CDS Inter-chr p25.2 TKL:RAF Oncogene p21.3 Seq+ 17667 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57697534 + VMP1 chr17 57886157 + Exonic hg19 BLCA TCGA-DK-A6B5-01A 9 32 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 17668 ChimerSeq STARFusion TCGA_RNA-Seq LOC100288778-WASH3P LOC100288778 chr12 89017 + WASH3P chr15 102515209 + Exonic hg19 BLCA TCGA-DK-A6B5-01A 9 15 Out-of-frame Inter-chr q26.3 17669 ChimerSeq STARFusion TCGA_RNA-Seq LOC100288778-WASH7P LOC100288778 chr12 89017 + WASH7P chr1 15954 - Exonic hg19 BLCA TCGA-DK-A6B5-01A 3 3 Out-of-frame Inter-chr p36.33 17670 ChimerSeq STARFusion TCGA_RNA-Seq ABCC5-CDC16 ABCC5 chr3 183655689 - CDC16 chr13 115008732 + Exonic hg19 BLCA TCGA-E5-A4U1-01A 2 2 Out-of-frame Inter-chr q27.1 q34 17671 ChimerSeq STARFusion TCGA_RNA-Seq NMD3-RAB7A NMD3 chr3 160960441 + RAB7A chr3 128514203 + Exonic hg19 BLCA TCGA-CF-A5UA-01A 2 2 CDS-5'UTR Intra-chr q26.1 q21.3 Tumor suppressor gene 17672 ChimerSeq STARFusion TCGA_RNA-Seq PVRL2-IGSF23 PVRL2 chr19 45368917 + IGSF23 chr19 45138701 + Exonic hg19 BLCA TCGA-UY-A8OB 5 42 Out-of-frame Intra-chr q13.31 Seq+ 17673 ChimerSeq STARFusion TCGA_RNA-Seq GTF2F2-S100A4 GTF2F2 chr13 45694856 + S100A4 chr1 153517285 - Exonic hg19 BLCA TCGA-DK-A1AD-01A 104 394 CDS-5'UTR Inter-chr q14.12 q21.3 Seq+ 17674 ChimerSeq STARFusion TCGA_RNA-Seq GTF2F2-S100A3 GTF2F2 chr13 45694856 + S100A3 chr1 153520966 - Exonic hg19 BLCA TCGA-DK-A1AD-01A 10 77 CDS-5'UTR Inter-chr q14.12 q21.3 Seq+ 17675 ChimerSeq STARFusion TCGA_RNA-Seq EEA1-CRADD EEA1 chr12 93285405 - CRADD chr12 94243746 + Exonic hg19 BLCA TCGA-DK-A1AD-01A 18 41 Out-of-frame Intra-chr q22 Transcription factor q22 Seq+ 17676 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-UGT2A3 PTK2 chr8 142011224 - UGT2A3 chr4 69798477 - Exonic hg19 BLCA TCGA-DK-A1AD-01A 10 9 5'UTR-CDS Inter-chr q24.3 Seq+ 17677 ChimerSeq STARFusion TCGA_RNA-Seq FUBP1-USP33 FUBP1 chr1 78428455 - USP33 chr1 78207433 - Exonic hg19 BLCA TCGA-DK-A1AD-01A 4 17 In-Frame Intra-chr p31.1 Oncogene p31.1 Tumor suppressor gene Seq+ 17678 ChimerSeq STARFusion TCGA_RNA-Seq AFF1-PTPN13 AFF1 chr4 87928576 + PTPN13 chr4 87637683 + Exonic hg19 BLCA TCGA-DK-A1AD-01A 3 19 Out-of-frame Intra-chr q21.3 Oncogene q21.3 Tumor suppressor gene Seq+ 17679 ChimerSeq STARFusion TCGA_RNA-Seq DHRS2-GSTM2 DHRS2 chr14 24105981 + GSTM2 chr1 110213909 + Exonic hg19 BLCA TCGA-DK-A1AD-01A 3 10 5'UTR-CDS Inter-chr q11.2 p13.3 17680 ChimerSeq STARFusion TCGA_RNA-Seq PPARG-CDKAL1 PPARG chr3 12458653 + CDKAL1 chr6 20649524 + Exonic hg19 BLCA TCGA-DK-A1AD-01A 2 12 In-Frame Inter-chr p25.2 Oncogene Tumor suppressor gene Transcription factor p22.3 Seq+ 17681 ChimerSeq STARFusion TCGA_RNA-Seq STT3B-ZNF860 STT3B chr3 31574804 + ZNF860 chr3 32030152 + Exonic hg19 BLCA TCGA-DK-A1AD-01A 2 5 CDS-5'UTR Intra-chr p23 p23 Transcription factor Seq+ 17682 ChimerSeq STARFusion TCGA_RNA-Seq VPS72-GABPB2 VPS72 chr1 151150477 - GABPB2 chr1 151060666 + Exonic hg19 BLCA TCGA-XF-AAML 4 10 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 17683 ChimerSeq STARFusion TCGA_RNA-Seq MKRN2-PPARG MKRN2 chr3 12598675 + PPARG chr3 12353879 + Exonic hg19 BLCA TCGA-XF-AAML 3 12 CDS-5'UTR Intra-chr p25.2 p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 17684 ChimerSeq STARFusion TCGA_RNA-Seq CCDC9-NUP62 CCDC9 chr19 47770049 + NUP62 chr19 50413141 - Exonic hg19 BLCA TCGA-FD-A6TC-01A 14 37 CDS-5'UTR Intra-chr q13.32 q13.33 Seq+ 17685 ChimerSeq STARFusion TCGA_RNA-Seq CES2-SLC9A5 CES2 chr16 66968787 + SLC9A5 chr16 67304687 + Exonic hg19 BLCA TCGA-FD-A6TC-01A 6 22 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 17686 ChimerSeq STARFusion TCGA_RNA-Seq CES2-PLEKHG4 CES2 chr16 66968524 + PLEKHG4 chr16 67311497 + Exonic hg19 BLCA TCGA-FD-A6TC-01A 5 18 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 17687 ChimerSeq STARFusion TCGA_RNA-Seq CDC42BPA-WWOX CDC42BPA chr1 227504706 - WWOX chr16 79245505 + Exonic hg19 BLCA TCGA-FD-A6TC-01A 6 5 Out-of-frame Inter-chr q42.13 q23.1 Tumor suppressor gene Seq+ 17688 ChimerSeq STARFusion TCGA_RNA-Seq ANO2-BICD1 ANO2 chr12 6030206 - BICD1 chr12 32446928 + Exonic hg19 BLCA TCGA-FD-A6TC-01A 3 1 In-Frame Intra-chr p13.31 p11.21 Seq+ 17689 ChimerSeq STARFusion TCGA_RNA-Seq CCBP2-KRBOX1 CCBP2 chr3 42861203 + KRBOX1 chr3 42980342 + Exonic hg19 BLCA TCGA-FD-A6TC-01A 2 3 5'UTR-5'UTR Intra-chr p22.1 Seq+ 17690 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-LACRT FRS2 chr12 69864310 + LACRT chr12 55027017 - Exonic hg19 BLCA TCGA-S5-A6DX-01A 7 49 5'UTR-CDS Intra-chr q15 q13.2 Seq+ 17691 ChimerSeq STARFusion TCGA_RNA-Seq ASAP1-ADCY2 ASAP1 chr8 131226802 - ADCY2 chr5 7784478 + Exonic hg19 BLCA TCGA-S5-A6DX-01A 2 14 Out-of-frame Inter-chr q24.22 p15.31 Seq+ 17692 ChimerSeq STARFusion TCGA_RNA-Seq PTEN-RNLS PTEN chr10 89693008 + RNLS chr10 90045263 - Exonic hg19 BLCA TCGA-ZF-A9RE-01A 7 23 In-Frame Intra-chr q23.31 Oncogene Tumor suppressor gene q23.31 Seq+ 17693 ChimerSeq STARFusion TCGA_RNA-Seq BPTF-TTYH2 BPTF chr17 65822453 + TTYH2 chr17 72233433 + Exonic hg19 BLCA TCGA-ZF-A9RE-01A 2 6 Out-of-frame Intra-chr q24.2 Transcription factor q25.1 Seq+ 17694 ChimerSeq STARFusion TCGA_RNA-Seq NEDD4-GABRA5 NEDD4 chr15 56285709 - GABRA5 chr15 27113876 + Exonic hg19 BLCA TCGA-GD-A2C5-01A 4 10 CDS-5'UTR Intra-chr q21.3 Tumor suppressor gene q12 Seq+ 17695 ChimerSeq STARFusion TCGA_RNA-Seq GGNBP2-ZMAT4 GGNBP2 chr17 34913176 + ZMAT4 chr8 40554920 - Exonic hg19 BLCA TCGA-GD-A2C5-01A 2 17 Out-of-frame Inter-chr Tumor suppressor gene p11.21 Transcription factor Seq+ 17696 ChimerSeq STARFusion TCGA_RNA-Seq LINC00673-SLC39A11 LINC00673 chr17 70588342 - SLC39A11 chr17 70732858 - Exonic hg19 BLCA TCGA-GC-A3RB-01A 22 50 Out-of-frame Intra-chr q25.1 17697 ChimerSeq STARFusion TCGA_RNA-Seq CDC5L-TMEM63B CDC5L chr6 44376369 + TMEM63B chr6 44102298 + Exonic hg19 BLCA TCGA-GC-A3RB-01A 19 57 5'UTR-5'UTR Intra-chr p21.1 Transcription factor p21.1 Seq+ 17698 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL2-CDH4 OSBPL2 chr20 60813653 + CDH4 chr20 60485478 + Exonic hg19 BLCA TCGA-GC-A3RB-01A 21 15 5'UTR-CDS Intra-chr q13.33 q13.33 Tumor suppressor gene Seq+ 17699 ChimerSeq STARFusion TCGA_RNA-Seq PTGES2-MLXIP PTGES2 chr9 130884641 - MLXIP chr12 122626238 + Exonic hg19 BLCA TCGA-GC-A3RB-01A 12 38 Out-of-frame Inter-chr q34.11 Transcription factor Seq+ 17700 ChimerSeq STARFusion TCGA_RNA-Seq PLAT-SLC20A2 PLAT chr8 42065012 - SLC20A2 chr8 42302280 - Exonic hg19 BLCA TCGA-GC-A3RB-01A 12 20 5'UTR-CDS Intra-chr p11.21 p11.21 17701 ChimerSeq STARFusion TCGA_RNA-Seq WDR37-TUBAL3 WDR37 chr10 1132297 + TUBAL3 chr10 5443050 - Exonic hg19 BLCA TCGA-GC-A3RB-01A 5 42 Out-of-frame Intra-chr p15.3 p15.1 Seq+ 17702 ChimerSeq STARFusion TCGA_RNA-Seq WDR37-TUBAL3 WDR37 chr10 1132297 + TUBAL3 chr10 5442930 - Exonic hg19 BLCA TCGA-GC-A3RB-01A 3 42 Out-of-frame Intra-chr p15.3 p15.1 Seq+ 17703 ChimerSeq STARFusion TCGA_RNA-Seq PCCA-CLYBL PCCA chr13 100921037 + CLYBL chr13 100543572 + Exonic hg19 BLCA TCGA-GC-A3RB-01A 8 14 Out-of-frame Intra-chr q32.3 q32.3 Seq+ 17704 ChimerSeq STARFusion TCGA_RNA-Seq SDK1-SLC29A4 SDK1 chr7 4218218 + SLC29A4 chr7 5342428 + Exonic hg19 BLCA TCGA-GC-A3RB-01A 2 14 In-Frame Intra-chr p22.2 p22.1 Seq+ 17705 ChimerSeq STARFusion TCGA_RNA-Seq USP12-E2F3 USP12 chr13 27664020 - E2F3 chr6 20480077 + Exonic hg19 BLCA TCGA-GC-A3RB-01A 4 5 Out-of-frame Inter-chr q12.13 Tumor suppressor gene p22.3 Tumor suppressor gene Transcription factor Seq+ 17706 ChimerSeq STARFusion TCGA_RNA-Seq PRIM2-LOC100507412 PRIM2 chr6 57246966 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BLCA TCGA-GC-A3RB-01A 3 8 CDS-5'UTR Inter-chr p11.2 17707 ChimerSeq STARFusion TCGA_RNA-Seq ATAD5-PTP4A1 ATAD5 chr17 29187630 + PTP4A1 chr6 64286341 + Exonic hg19 BLCA TCGA-GC-A3RB-01A 2 10 CDS-5'UTR Inter-chr q11.2 q12 Seq+ 17708 ChimerSeq STARFusion TCGA_RNA-Seq MMP15-CDH5 MMP15 chr16 58060416 + CDH5 chr16 66413222 + Exonic hg19 BLCA TCGA-GC-A3RB-01A 3 5 CDS-5'UTR Intra-chr q21 q21 Oncogene Tumor suppressor gene Seq+ 17709 ChimerSeq STARFusion TCGA_RNA-Seq UBE2D3-SLC9B1 UBE2D3 chr4 103789872 - SLC9B1 chr4 103832694 - Exonic hg19 BLCA TCGA-GC-A3RB-01A 2 4 Out-of-frame Intra-chr q24 q24 Seq+ 17710 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC1-CSPG5 SMARCC1 chr3 47814307 - CSPG5 chr3 47614364 - Exonic hg19 BLCA TCGA-ZF-A9RF-01A 24 27 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 17711 ChimerSeq STARFusion TCGA_RNA-Seq SCD5-LOC100507412 SCD5 chr4 83601860 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BLCA TCGA-ZF-A9RF-01A 5 9 CDS-5'UTR Inter-chr q21.22 17712 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP29-ABCA4 ARHGAP29 chr1 94696963 - ABCA4 chr1 94578622 - Exonic hg19 BLCA TCGA-ZF-A9RF-01A 4 4 Out-of-frame Intra-chr p22.1 Tumor suppressor gene p22.1 Seq+ 17713 ChimerSeq STARFusion TCGA_RNA-Seq CDKAL1-LIG1 CDKAL1 chr6 20649608 + LIG1 chr19 48634428 - Exonic hg19 BLCA TCGA-ZF-A9RF-01A 2 10 Out-of-frame Inter-chr p22.3 q13.33 Tumor suppressor gene Seq+ 17714 ChimerSeq STARFusion TCGA_RNA-Seq PLXNA1-CHCHD6 PLXNA1 chr3 126708630 + CHCHD6 chr3 126633523 + Exonic hg19 BLCA TCGA-CF-A1HS-01A 24 75 In-Frame Intra-chr q21.3 q21.3 Seq+ 17715 ChimerSeq STARFusion TCGA_RNA-Seq ATPAF1-OSBPL9 ATPAF1 chr1 47108866 - OSBPL9 chr1 52242505 + Exonic hg19 BLCA TCGA-CF-A1HS-01A 15 91 In-Frame Intra-chr p33 p32.3 Seq+ 17716 ChimerSeq STARFusion TCGA_RNA-Seq AASDHPPT-CARD16 AASDHPPT chr11 105950419 + CARD16 chr11 104915385 - Exonic hg19 BLCA TCGA-CF-A1HS-01A 3 22 In-Frame Intra-chr q22.3 q22.3 Seq+ 17717 ChimerSeq STARFusion TCGA_RNA-Seq ACTG1-POTEF ACTG1 chr17 79478965 - POTEF chr2 130832618 - Exonic hg19 BLCA TCGA-CF-A1HS-01A 7 1 Out-of-frame Inter-chr q25.3 q21.1 17718 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-THEMIS PTPRK chr6 128385903 - THEMIS chr6 128176333 - Exonic hg19 BLCA TCGA-CF-A1HS-01A 3 15 In-Frame Intra-chr Tumor suppressor gene Seq+ 17719 ChimerSeq STARFusion TCGA_RNA-Seq FRMD6-RTN4 FRMD6 chr14 52037128 + RTN4 chr2 55214834 - Exonic hg19 BLCA TCGA-CF-A1HS-01A 3 9 5'UTR-CDS Inter-chr q22.1 p16.1 Tumor suppressor gene Seq+ 17720 ChimerSeq STARFusion TCGA_RNA-Seq RICTOR-HCN1 RICTOR chr5 39074213 - HCN1 chr5 45645710 - Exonic hg19 BLCA TCGA-CF-A1HS-01A 2 9 Out-of-frame Intra-chr p13.1 p12 Seq+ 17721 ChimerSeq STARFusion TCGA_RNA-Seq AASDHPPT-CASP1 AASDHPPT chr11 105950419 + CASP1 chr11 104905201 - Exonic hg19 BLCA TCGA-CF-A1HS-01A 3 3 In-Frame Intra-chr q22.3 q22.3 17722 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80954854 - MRPS28 chr8 80831382 - Exonic hg19 BLCA TCGA-CF-A1HS-01A 3 3 Out-of-frame Intra-chr q21.13 q21.13 17723 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-DNAH8 ZFAND3 chr6 37787792 + DNAH8 chr6 38690552 + Exonic hg19 BLCA TCGA-CF-A1HS-01A 2 7 CDS-5'UTR Intra-chr p21.2 p21.2 Seq+ 17724 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT16 EGFR chr7 55242540 + KRT16 chr17 39768611 - Exonic hg19 BLCA TCGA-CF-A1HS-01A 3 2 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 17725 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-LOC100507412 RCC1 chr1 28834672 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BLCA TCGA-GU-A766-01A 4 10 5'UTR-5'UTR Inter-chr p35.3 17726 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-LOC100507412 SNHG3 chr1 28834672 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BLCA TCGA-GU-A766-01A 4 10 5'UTR-5'UTR Inter-chr p35.3 17727 ChimerSeq STARFusion TCGA_RNA-Seq ZNF326-CCDC18 ZNF326 chr1 90460832 + CCDC18 chr1 93691890 + Exonic hg19 BLCA TCGA-2F-A9KR-01A 17 75 Out-of-frame Intra-chr p22.2 Transcription factor p22.1 Seq+ 17728 ChimerSeq STARFusion TCGA_RNA-Seq MSI2-BCAS3 MSI2 chr17 55729522 + BCAS3 chr17 58885365 + Exonic hg19 BLCA TCGA-2F-A9KR-01A 4 14 In-Frame Intra-chr q22 q23.2 Seq+ 17729 ChimerSeq STARFusion TCGA_RNA-Seq NAA35-LAMC3 NAA35 chr9 88628812 + LAMC3 chr9 133951218 + Exonic hg19 BLCA TCGA-CU-A3YL-01A 3 12 In-Frame Intra-chr q21.33 q34.12 Seq+ 17730 ChimerSeq STARFusion TCGA_RNA-Seq PGAP3-STARD3 PGAP3 chr17 37840850 - STARD3 chr17 37813261 + Exonic hg19 BLCA TCGA-DK-A2I6-01A 6 123 In-Frame Intra-chr q12 Oncogene q12 Seq+ 17731 ChimerSeq STARFusion TCGA_RNA-Seq ITGB6-RBMS1 ITGB6 chr2 160964190 - RBMS1 chr2 161141555 - Exonic hg19 BLCA TCGA-DK-A2I6-01A 15 48 In-Frame Intra-chr q24.2 q24.2 Seq+ 17732 ChimerSeq STARFusion TCGA_RNA-Seq SNX8-MAD1L1 SNX8 chr7 2317735 - MAD1L1 chr7 2054277 - Exonic hg19 BLCA TCGA-DK-A2I6-01A 9 35 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 17733 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-CDADC1 VPS13B chr8 100403932 + CDADC1 chr13 49865820 + Exonic hg19 BLCA TCGA-DK-A2I6-01A 5 33 In-Frame Inter-chr q22.2 q14.2 Seq+ 17734 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-TATDN1 ERBB2 chr17 37868701 + TATDN1 chr8 125507783 - Exonic hg19 BLCA TCGA-DK-A2I6-01A 10 12 In-Frame Inter-chr q12 Oncogene q24.13 Seq+ 17735 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-CDADC1 VPS13B chr8 100412363 + CDADC1 chr13 49865820 + Exonic hg19 BLCA TCGA-DK-A2I6-01A 3 33 CDS-5'UTR Inter-chr q22.2 q14.2 Seq+ 17736 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-CDADC1 VPS13B chr8 100403932 + CDADC1 chr13 49866914 + Exonic hg19 BLCA TCGA-DK-A2I6-01A 3 33 In-Frame Inter-chr q22.2 q14.2 Seq+ 17737 ChimerSeq STARFusion TCGA_RNA-Seq MTSS1-ERBB2 MTSS1 chr8 125740125 - ERBB2 chr17 37863243 + Exonic hg19 BLCA TCGA-DK-A2I6-01A 5 22 Out-of-frame Inter-chr q24.13 Tumor suppressor gene q12 Oncogene Seq+ 17738 ChimerSeq STARFusion TCGA_RNA-Seq RBBP8-TP53 RBBP8 chr18 20596887 + TP53 chr17 7579940 - Exonic hg19 BLCA TCGA-DK-A2I6-01A 5 12 CDS-5'UTR Inter-chr q11.2 Tumor suppressor gene p13.1 Oncogene Tumor suppressor gene Transcription factor Seq+ 17739 ChimerSeq STARFusion TCGA_RNA-Seq CAB39L-CPQ CAB39L chr13 49924880 - CPQ chr8 97847201 + Exonic hg19 BLCA TCGA-DK-A2I6-01A 3 6 Out-of-frame Inter-chr q14.2 q22.1 Seq+ 17740 ChimerSeq STARFusion TCGA_RNA-Seq DCUN1D2-TMCO3 DCUN1D2 chr13 114144982 - TMCO3 chr13 114201615 + Exonic hg19 BLCA TCGA-DK-A2I6-01A 2 0 Out-of-frame Intra-chr q34 q34 Seq+ 17741 ChimerSeq STARFusion TCGA_RNA-Seq DAP-CCT5 DAP chr5 10748287 - CCT5 chr5 10258223 + Exonic hg19 BLCA TCGA-BT-A20W-01A 19 76 In-Frame Intra-chr p15.2 p15.2 Seq+ 17742 ChimerSeq STARFusion TCGA_RNA-Seq TRPM7-SRP14 TRPM7 chr15 50978728 - SRP14 chr15 40331149 - Exonic hg19 BLCA TCGA-BT-A20W-01A 7 79 In-Frame Intra-chr q21.2 q15.1 Seq+ 17743 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC1-SHISA5 SMARCC1 chr3 47747899 - SHISA5 chr3 48511242 - Exonic hg19 BLCA TCGA-BT-A20W-01A 12 51 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 17744 ChimerSeq STARFusion TCGA_RNA-Seq ADIPOR2-DCP1B ADIPOR2 chr12 1800379 + DCP1B chr12 2077076 - Exonic hg19 BLCA TCGA-BT-A20W-01A 9 59 5'UTR-CDS Intra-chr p13.33 p13.33 Seq+ 17745 ChimerSeq STARFusion TCGA_RNA-Seq ADIPOR2-DCP1B ADIPOR2 chr12 1800357 + DCP1B chr12 2077076 - Exonic hg19 BLCA TCGA-BT-A20W-01A 9 59 5'UTR-CDS Intra-chr p13.33 p13.33 Seq+ 17746 ChimerSeq STARFusion TCGA_RNA-Seq DAP-CCT5 DAP chr5 10748287 - CCT5 chr5 10256067 + Exonic hg19 BLCA TCGA-BT-A20W-01A 2 76 Out-of-frame Intra-chr p15.2 p15.2 Seq+ 17747 ChimerSeq STARFusion TCGA_RNA-Seq RAD21-EIF3H RAD21 chr8 117868405 - EIF3H chr8 117671219 - Exonic hg19 BLCA TCGA-BT-A20W-01A 11 33 In-Frame Intra-chr q24.11 q24.11 Seq+ 17748 ChimerSeq STARFusion TCGA_RNA-Seq RAD21-EIF3H RAD21 chr8 117886850 - EIF3H chr8 117661165 - Exonic hg19 BLCA TCGA-BT-A20W-01A 6 33 5'UTR-CDS Intra-chr q24.11 q24.11 Seq+ 17749 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHG1-MTHFD1L PLEKHG1 chr6 151153341 + MTHFD1L chr6 151277131 + Exonic hg19 BLCA TCGA-BT-A20W-01A 4 5 In-Frame Intra-chr q25.1 q25.1 Seq+ 17750 ChimerSeq STARFusion TCGA_RNA-Seq ITGB6-RBMS1 ITGB6 chr2 161051880 - RBMS1 chr2 161174738 - Exonic hg19 BLCA TCGA-BT-A20W-01A 3 8 In-Frame Intra-chr q24.2 q24.2 Seq+ 17751 ChimerSeq STARFusion TCGA_RNA-Seq MACROD1-NRXN2 MACROD1 chr11 63918711 - NRXN2 chr11 64375554 - Exonic hg19 BLCA TCGA-BT-A20W-01A 3 3 In-Frame Intra-chr q13.1 q13.1 Seq+ 17752 ChimerSeq STARFusion TCGA_RNA-Seq KIF5C-EPC2 KIF5C chr2 149840280 + EPC2 chr2 149447783 + Exonic hg19 BLCA TCGA-BT-A20W-01A 3 1 In-Frame Intra-chr q23.1 17753 ChimerSeq STARFusion TCGA_RNA-Seq EIF5B-LOC442028 EIF5B chr2 99995891 + LOC442028 chr2 95558523 - Exonic hg19 BLCA TCGA-BT-A20W-01A 2 0 CDS-3'UTR Intra-chr q11.2 17754 ChimerSeq STARFusion TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105614953 - OBFC1 chr10 105670380 - Exonic hg19 BLCA TCGA-UY-A9PB-01A 16 69 Out-of-frame Intra-chr q24.33 Seq+ 17755 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-C1orf86 GNB1 chr1 1822259 - C1orf86 chr1 2116952 - Exonic hg19 BLCA TCGA-UY-A9PB-01A 2 6 5'UTR-CDS Intra-chr p36.33 17756 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD46-NCALD ANKRD46 chr8 101571939 - NCALD chr8 102705124 - Exonic hg19 BLCA TCGA-XF-A8HH-01A 19 13 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 17757 ChimerSeq STARFusion TCGA_RNA-Seq XPO1-C2orf74 XPO1 chr2 61749746 - C2orf74 chr2 61389977 + Exonic hg19 BLCA TCGA-XF-A8HH-01A 3 10 Out-of-frame Intra-chr p15 Oncogene p15 Seq+ 17758 ChimerSeq STARFusion TCGA_RNA-Seq ITGA3-CASC3 ITGA3 chr17 48158772 + CASC3 chr17 38318006 + Exonic hg19 BLCA TCGA-XF-A8HH-01A 3 1 In-Frame Intra-chr q21.33 q21.1 17759 ChimerSeq STARFusion TCGA_RNA-Seq DHRS2-GSTM2 DHRS2 chr14 24105981 + GSTM2 chr1 110213909 + Exonic hg19 BLCA TCGA-XF-A8HH-01A 2 1 5'UTR-CDS Inter-chr q11.2 p13.3 17760 ChimerSeq STARFusion TCGA_RNA-Seq IKZF2-SPAG16 IKZF2 chr2 214012432 - SPAG16 chr2 214174783 + Exonic hg19 BLCA TCGA-XF-A8HH-01A 2 0 Out-of-frame Intra-chr q34 Tumor suppressor gene Transcription factor q34 17761 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-GRB10 EGFR chr7 55087058 + GRB10 chr7 50742355 - Exonic hg19 BLCA TCGA-GC-A6I3-01A 2 4 In-Frame Intra-chr p11.2 TK:EGFR Oncogene p12.1 Seq+ 17762 ChimerSeq STARFusion TCGA_RNA-Seq SEC23A-ATP5EP2 SEC23A chr14 39501132 - ATP5EP2 chr13 28519701 + Exonic hg19 BLCA TCGA-GC-A6I3-01A 3 0 Out-of-frame Inter-chr q21.1 q12.2 17763 ChimerSeq STARFusion TCGA_RNA-Seq DHRS12-RASL11A DHRS12 chr13 52373670 - RASL11A chr13 27845621 + Exonic hg19 BLCA TCGA-GC-A3RC-01A 15 24 Out-of-frame Intra-chr q14.3 q12.2 Tumor suppressor gene Seq+ 17764 ChimerSeq STARFusion TCGA_RNA-Seq QRICH1-PRKAR2A QRICH1 chr3 49081823 - PRKAR2A chr3 48845117 - Exonic hg19 BLCA TCGA-GC-A3RC-01A 7 19 In-Frame Intra-chr p21.31 p21.31 Seq+ 17765 ChimerSeq STARFusion TCGA_RNA-Seq SYNRG-ACACA SYNRG chr17 35956270 - ACACA chr17 35583373 - Exonic hg19 BLCA TCGA-GC-A3RC-01A 2 25 In-Frame Intra-chr 17766 ChimerSeq STARFusion TCGA_RNA-Seq TRPM4-PPFIA3 TRPM4 chr19 49675365 + PPFIA3 chr19 49636258 + Exonic hg19 BLCA TCGA-KQ-A41N-01A 4 23 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 17767 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-LGALS7B ACTN4 chr19 39138547 + LGALS7B chr19 39281329 + Exonic hg19 BLCA TCGA-KQ-A41N-01A 4 10 Out-of-frame Intra-chr Seq+ 17768 ChimerSeq STARFusion TCGA_RNA-Seq KAT6B-ADK KAT6B chr10 76603236 + ADK chr10 76349040 + Exonic hg19 BLCA TCGA-KQ-A41N-01A 2 6 In-Frame Intra-chr Oncogene q22.2 Seq+ 17769 ChimerSeq STARFusion TCGA_RNA-Seq LDLRAP1-TMEM57 LDLRAP1 chr1 25870277 + TMEM57 chr1 25824755 + Exonic hg19 BLCA TCGA-XF-A9SZ 5 16 In-Frame Intra-chr p36.11 p36.11 Seq+ 17770 ChimerSeq STARFusion TCGA_RNA-Seq ABR-ACAD10 ABR chr17 1082961 - ACAD10 chr12 112191576 + Exonic hg19 BLCA TCGA-XF-A9SP 4 3 Out-of-frame Inter-chr p13.3 q24.12 Seq+ 17771 ChimerSeq STARFusion TCGA_RNA-Seq CMAS-GAS5 CMAS chr12 22215368 + GAS5 chr1 173833442 - Exonic hg19 BLCA TCGA-G2-A3IB-01A 4 24 CDS-3'UTR Inter-chr p12.1 q25.1 Tumor suppressor gene Seq+ 17772 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-PPIB RNA45S5 chrUn_gl000220 110500 + PPIB chr15 64455219 - Exonic hg19 BLCA TCGA-G2-A3IB-01A 3 3 Out-of-frame Inter-chr q22.31 17773 ChimerSeq STARFusion TCGA_RNA-Seq STIP1-NSL1 STIP1 chr11 63953742 + NSL1 chr1 212957835 - Exonic hg19 BLCA TCGA-G2-A3IB-01A 2 4 Out-of-frame Inter-chr q13.1 q32.3 Seq+ 17774 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010683 - TTC18 chr10 75016175 - Exonic hg19 BLCA TCGA-XF-A9ST 45 211 Out-of-frame Intra-chr q22.2 17775 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010573 - TTC18 chr10 75016174 - Exonic hg19 BLCA TCGA-XF-A9ST 14 211 3'UTR-CDS Intra-chr q22.2 17776 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75011521 - TTC18 chr10 75016174 - Exonic hg19 BLCA TCGA-XF-A9ST 13 211 Out-of-frame Intra-chr q22.2 17777 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010596 - TTC18 chr10 75016174 - Exonic hg19 BLCA TCGA-XF-A9ST 7 211 3'UTR-CDS Intra-chr q22.2 17778 ChimerSeq STARFusion TCGA_RNA-Seq TEAD1-CD47 TEAD1 chr11 12697108 + CD47 chr3 107779699 - Exonic hg19 BLCA TCGA-XF-A9ST 19 41 5'UTR-CDS Inter-chr p15.3 Transcription factor q13.12 Seq+ 17779 ChimerSeq STARFusion TCGA_RNA-Seq UQCRC1-PRKAR2A UQCRC1 chr3 48637496 - PRKAR2A chr3 48785373 - Exonic hg19 BLCA TCGA-XF-A9ST 6 42 CDS-3'UTR Intra-chr p21.31 p21.31 Seq+ 17780 ChimerSeq STARFusion TCGA_RNA-Seq FDFT1-GATA4 FDFT1 chr8 11679387 + GATA4 chr8 11614444 + Exonic hg19 BLCA TCGA-XF-A9ST 6 38 Out-of-frame Intra-chr p23.1 p23.1 Tumor suppressor gene Transcription factor Seq+ 17781 ChimerSeq STARFusion TCGA_RNA-Seq TEAD1-CD47 TEAD1 chr11 12696381 + CD47 chr3 107779699 - Exonic hg19 BLCA TCGA-XF-A9ST 2 41 5'UTR-CDS Inter-chr p15.3 Transcription factor q13.12 Seq+ 17782 ChimerSeq STARFusion TCGA_RNA-Seq NRBF2-REEP3 NRBF2 chr10 64893260 + REEP3 chr10 65354538 + Exonic hg19 BLCA TCGA-XF-A9SU 2 9 In-Frame Intra-chr q21.3 q21.3 Seq+ 17783 ChimerSeq STARFusion TCGA_RNA-Seq TMEM87B-MERTK TMEM87B chr2 112834859 + MERTK chr2 112765960 + Exonic hg19 BLCA TCGA-XF-A9SU 2 5 In-Frame Intra-chr q13 q13 Seq+ 17784 ChimerSeq STARFusion TCGA_RNA-Seq SNRNP70-CDC42EP5 SNRNP70 chr19 49589818 + CDC42EP5 chr19 54982906 - Exonic hg19 BLCA TCGA-XF-A9SV 9 55 CDS-5'UTR Intra-chr q13.33 Seq+ 17785 ChimerSeq STARFusion TCGA_RNA-Seq SNRNP70-CDC42EP5 SNRNP70 chr19 49588893 + CDC42EP5 chr19 54982906 - Exonic hg19 BLCA TCGA-XF-A9SV 4 55 5'UTR-5'UTR Intra-chr q13.33 Seq+ 17786 ChimerSeq STARFusion TCGA_RNA-Seq ADAM17-ORAOV1 ADAM17 chr2 9675963 - ORAOV1 chr11 69471420 - Exonic hg19 BLCA TCGA-XF-A9SV 4 21 CDS-3'UTR Inter-chr p25.1 q13.3 Seq+ 17787 ChimerSeq STARFusion TCGA_RNA-Seq ADAM17-ORAOV1 ADAM17 chr2 9675964 - ORAOV1 chr11 69469186 - Exonic hg19 BLCA TCGA-XF-A9SV 3 21 Out-of-frame Inter-chr p25.1 q13.3 Seq+ 17788 ChimerSeq STARFusion TCGA_RNA-Seq ADAM17-ORAOV1 ADAM17 chr2 9675963 - ORAOV1 chr11 69469152 - Exonic hg19 BLCA TCGA-XF-A9SV 3 21 CDS-3'UTR Inter-chr p25.1 q13.3 Seq+ 17789 ChimerSeq STARFusion TCGA_RNA-Seq YWHAQ-MBOAT2 YWHAQ chr2 9770288 - MBOAT2 chr2 9004364 - Exonic hg19 BLCA TCGA-XF-A9SV 2 3 In-Frame Intra-chr p25.1 p25.1 17790 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-PPP1R1B STARD3 chr17 37793484 + PPP1R1B chr17 37785423 + Exonic hg19 BLCA TCGA-XF-A9SW 3 3 5'UTR-5'UTR Intra-chr q12 q12 Tumor suppressor gene Seq+ 17791 ChimerSeq STARFusion TCGA_RNA-Seq ILF3-ATG4D ILF3 chr19 10765163 + ATG4D chr19 10662573 + Exonic hg19 BLCA TCGA-XF-A9SI 5 13 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 17792 ChimerSeq STARFusion TCGA_RNA-Seq PROSC-CHMP1A PROSC chr8 37623873 + CHMP1A chr16 89713739 - Exonic hg19 BLCA TCGA-XF-A9SK 7 8 In-Frame Inter-chr q24.3 Seq+ 17793 ChimerSeq STARFusion TCGA_RNA-Seq MRPS17-NELFB MRPS17 chr7 55980416 + NELFB chr9 140166533 + Exonic hg19 BLCA TCGA-XF-A9SK 3 13 Out-of-frame Inter-chr p11.2 q34.3 17794 ChimerSeq STARFusion TCGA_RNA-Seq ZNF713-NELFB ZNF713 chr7 55980416 + NELFB chr9 140166533 + Exonic hg19 BLCA TCGA-XF-A9SK 3 13 Out-of-frame Inter-chr p11.2 Transcription factor q34.3 Seq+ 17795 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-CD300E GRB7 chr17 37901237 + CD300E chr17 72610172 - Exonic hg19 BLCA TCGA-XF-A9SK 2 4 Out-of-frame Intra-chr q12 q25.1 Seq+ 17796 ChimerSeq STARFusion TCGA_RNA-Seq ROBO1-LPHN3 ROBO1 chr3 78734896 - LPHN3 chr4 62679527 + Exonic hg19 BLCA TCGA-XF-A9SK 2 4 In-Frame Inter-chr p12.3 Tumor suppressor gene Seq+ 17797 ChimerSeq STARFusion TCGA_RNA-Seq TMEM241-TEX101 TMEM241 chr18 20936558 - TEX101 chr19 43906918 + Exonic hg19 BLCA TCGA-FD-A3B4-01A 3 0 CDS-5'UTR Inter-chr q11.2 q13.31 17798 ChimerSeq STARFusion TCGA_RNA-Seq GPR110-TNFRSF21 GPR110 chr6 46989694 - TNFRSF21 chr6 47254331 - Exonic hg19 BLCA TCGA-DK-AA6S 37 133 In-Frame Intra-chr p12.3 Seq+ 17799 ChimerSeq STARFusion TCGA_RNA-Seq GPR110-TNFRSF21 GPR110 chr6 46988467 - TNFRSF21 chr6 47254331 - Exonic hg19 BLCA TCGA-DK-AA6S 9 133 Out-of-frame Intra-chr p12.3 Seq+ 17800 ChimerSeq STARFusion TCGA_RNA-Seq DHX16-LINC00243 DHX16 chr6 30630404 - LINC00243 chr6 30766549 - Exonic hg19 BLCA TCGA-DK-AA6S 5 17 Out-of-frame Intra-chr p21.33 17801 ChimerSeq STARFusion TCGA_RNA-Seq SMIM14-PDS5A SMIM14 chr4 39640359 - PDS5A chr4 39868617 - Exonic hg19 BLCA TCGA-DK-AA6S 2 2 Out-of-frame Intra-chr p14 p14 17802 ChimerSeq STARFusion TCGA_RNA-Seq RAB3IP-NUP107 RAB3IP chr12 70150443 + NUP107 chr12 69125387 + Exonic hg19 BLCA TCGA-BT-A0S7-01A 91 536 Out-of-frame Intra-chr q15 q15 Seq+ 17803 ChimerSeq STARFusion TCGA_RNA-Seq YEATS4-LYZ YEATS4 chr12 69759664 + LYZ chr12 69743888 + Exonic hg19 BLCA TCGA-BT-A0S7-01A 54 290 Out-of-frame Intra-chr q15 q15 Seq+ 17804 ChimerSeq STARFusion TCGA_RNA-Seq YEATS4-LYZ YEATS4 chr12 69756687 + LYZ chr12 69743888 + Exonic hg19 BLCA TCGA-BT-A0S7-01A 7 290 Out-of-frame Intra-chr q15 q15 Seq+ 17805 ChimerSeq STARFusion TCGA_RNA-Seq EP300-MCHR1 EP300 chr22 41489102 + MCHR1 chr22 41076953 + Exonic hg19 BLCA TCGA-BT-A0S7-01A 14 81 In-Frame Intra-chr q13.2 Oncogene q13.2 Seq+ 17806 ChimerSeq STARFusion TCGA_RNA-Seq AMOTL1-SLCO2B1 AMOTL1 chr11 94528326 + SLCO2B1 chr11 74873700 + Exonic hg19 BLCA TCGA-BT-A0S7-01A 2 12 In-Frame Intra-chr q21 q13.4 Seq+ 17807 ChimerSeq STARFusion TCGA_RNA-Seq LRBA-SH3D19 LRBA chr4 151656410 - SH3D19 chr4 152108615 - Exonic hg19 BLCA TCGA-GC-A3BM-01A 4 3 CDS-5'UTR Intra-chr q31.3 q31.3 KB Seq+ 17808 ChimerSeq STARFusion TCGA_RNA-Seq DLEU2-SPRYD7 DLEU2 chr13 50649695 - SPRYD7 chr13 50505270 - Exonic hg19 BLCA TCGA-ZF-A9RN 13 64 3'UTR-CDS Intra-chr q14.2 Tumor suppressor gene q14.2 17809 ChimerSeq STARFusion TCGA_RNA-Seq YEATS2-HTR3E YEATS2 chr3 183433050 + HTR3E chr3 183818273 + Exonic hg19 BLCA TCGA-ZF-A9RN 5 64 In-Frame Intra-chr q27.1 q27.1 Seq+ 17810 ChimerSeq STARFusion TCGA_RNA-Seq YEATS2-HTR3E YEATS2 chr3 183433050 + HTR3E chr3 183822575 + Exonic hg19 BLCA TCGA-ZF-A9RN 4 64 Out-of-frame Intra-chr q27.1 q27.1 Seq+ 17811 ChimerSeq STARFusion TCGA_RNA-Seq YEATS2-HTR3E YEATS2 chr3 183433050 + HTR3E chr3 183821970 + Exonic hg19 BLCA TCGA-ZF-A9RN 3 64 Out-of-frame Intra-chr q27.1 q27.1 Seq+ 17812 ChimerSeq STARFusion TCGA_RNA-Seq DLEU2-SPRYD7 DLEU2 chr13 50649695 - SPRYD7 chr13 50502221 - Exonic hg19 BLCA TCGA-ZF-A9RN 2 64 3'UTR-CDS Intra-chr q14.2 Tumor suppressor gene q14.2 17813 ChimerSeq STARFusion TCGA_RNA-Seq DLEU2-KPNA3 DLEU2 chr13 50649695 - KPNA3 chr13 50321129 - Exonic hg19 BLCA TCGA-ZF-A9RN 5 27 3'UTR-CDS Intra-chr q14.2 Tumor suppressor gene q14.2 17814 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-TRAPPC9 AGO2 chr8 141645584 - TRAPPC9 chr8 141263028 - Exonic hg19 BLCA TCGA-ZF-A9RN 2 28 Out-of-frame Intra-chr q24.3 q24.3 17815 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R12A-PAWR PPP1R12A chr12 80203575 - PAWR chr12 80007389 - Exonic hg19 BLCA TCGA-ZF-A9RN 2 12 In-Frame Intra-chr q21.31 q21.2 Tumor suppressor gene 17816 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-POPDC3 PTPRK chr6 128718711 - POPDC3 chr6 105610035 - Exonic hg19 BLCA TCGA-ZF-A9RN 2 4 CDS-5'UTR Intra-chr Tumor suppressor gene q21 Seq+ 17817 ChimerSeq STARFusion TCGA_RNA-Seq RNF111-SLTM RNF111 chr15 59359282 + SLTM chr15 59193486 - Exonic hg19 BLCA TCGA-ZF-A9RN 2 4 In-Frame Intra-chr q22.1 Tumor suppressor gene q22.1 Seq+ 17818 ChimerSeq STARFusion TCGA_RNA-Seq PEX5-PRB1 PEX5 chr12 7351709 + PRB1 chr12 11504863 - Exonic hg19 BLCA TCGA-GU-A767-01A 63 30 CDS-3'UTR Intra-chr p13.31 Tumor suppressor gene Seq+ 17819 ChimerSeq STARFusion TCGA_RNA-Seq PEX5-PRB2 PEX5 chr12 7351709 + PRB2 chr12 11544582 - Exonic hg19 BLCA TCGA-GU-A767-01A 28 170 CDS-3'UTR Intra-chr p13.31 p13.2 Seq+ 17820 ChimerSeq STARFusion TCGA_RNA-Seq PIKFYVE-MLPH PIKFYVE chr2 209185083 + MLPH chr2 238451210 + Exonic hg19 BLCA TCGA-GU-A767-01A 10 43 In-Frame Intra-chr q34 q37.3 Seq+ 17821 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D8-LIPF TBC1D8 chr2 101666863 - LIPF chr10 90438202 + Exonic hg19 BLCA TCGA-GU-A767-01A 5 49 Out-of-frame Inter-chr q11.2 q23.31 Seq+ 17822 ChimerSeq STARFusion TCGA_RNA-Seq MBNL2-PLAC8 MBNL2 chr13 97874785 + PLAC8 chr4 84026173 - Exonic hg19 BLCA TCGA-GU-A767-01A 4 28 5'UTR-CDS Inter-chr q32.1 Transcription factor q21.22 Seq+ 17823 ChimerSeq STARFusion TCGA_RNA-Seq MBNL2-PLAC8 MBNL2 chr13 97874785 + PLAC8 chr4 84029103 - Exonic hg19 BLCA TCGA-GU-A767-01A 3 28 5'UTR-5'UTR Inter-chr q32.1 Transcription factor q21.22 Seq+ 17824 ChimerSeq STARFusion TCGA_RNA-Seq MBNL2-PLAC8 MBNL2 chr13 97874785 + PLAC8 chr4 84015944 - Exonic hg19 BLCA TCGA-GU-A767-01A 2 28 5'UTR-CDS Inter-chr q32.1 Transcription factor q21.22 Seq+ 17825 ChimerSeq STARFusion TCGA_RNA-Seq KPNA3-SPRYD7 KPNA3 chr13 50366574 - SPRYD7 chr13 50495716 - Exonic hg19 BLCA TCGA-GU-A767-01A 2 7 In-Frame Intra-chr q14.2 q14.2 Seq+ 17826 ChimerSeq STARFusion TCGA_RNA-Seq TIA1-OSTC TIA1 chr2 70475537 - OSTC chr4 109576720 + Exonic hg19 BLCA TCGA-GU-A767-01A 2 3 Out-of-frame Inter-chr p13.3 q25 17827 ChimerSeq STARFusion TCGA_RNA-Seq FRRS1-PALMD FRRS1 chr1 100206349 - PALMD chr1 100127875 + Exonic hg19 BLCA TCGA-GU-A767-01A 2 1 In-Frame Intra-chr p21.2 p21.2 Seq+ 17828 ChimerSeq STARFusion TCGA_RNA-Seq BRE-DTNB BRE chr2 28352247 + DTNB chr2 25678363 - Exonic hg19 BLCA TCGA-G2-A2EC-01A 3 41 In-Frame Intra-chr p23.3 Seq+ 17829 ChimerSeq STARFusion TCGA_RNA-Seq BRE-DTNB BRE chr2 28352247 + DTNB chr2 25674504 - Exonic hg19 BLCA TCGA-G2-A2EC-01A 2 41 In-Frame Intra-chr p23.3 Seq+ 17830 ChimerSeq STARFusion TCGA_RNA-Seq ZNF276-SPG7 ZNF276 chr16 89805703 + SPG7 chr16 89613066 + Exonic hg19 BLCA TCGA-G2-A2EC-01A 5 11 3'UTR-CDS Intra-chr q24.3 Transcription factor q24.3 Seq+ 17831 ChimerSeq STARFusion TCGA_RNA-Seq PDXDC2P-PDPR PDXDC2P chr16 70065803 - PDPR chr16 70190640 + Exonic hg19 BLCA TCGA-G2-A2EC-01A 5 10 3'UTR-CDS Intra-chr q22.1 q22.1 17832 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-CTTN ERBB2 chr17 37872192 + CTTN chr11 70269046 + Exonic hg19 BLCA TCGA-DK-A1A5-01A 7 20 In-Frame Inter-chr q12 Oncogene q13.3 Seq+ 17833 ChimerSeq STARFusion TCGA_RNA-Seq COIL-CA4 COIL chr17 55038136 - CA4 chr17 58232675 + Exonic hg19 BLCA TCGA-DK-A1A5-01A 4 12 Out-of-frame Intra-chr q22 q23.1 Seq+ 17834 ChimerSeq STARFusion TCGA_RNA-Seq LINC00649-RSPH1 LINC00649 chr21 35318199 + RSPH1 chr21 43896157 - Exonic hg19 BLCA TCGA-DK-A1A5-01A 3 3 Out-of-frame Intra-chr q22.11 q22.3 17835 ChimerSeq STARFusion TCGA_RNA-Seq HIRA-MRPL40 HIRA chr22 19418963 - MRPL40 chr22 19420788 + Exonic hg19 BLCA TCGA-UY-A78K-01A 30 67 Out-of-frame Intra-chr q11.21 Tumor suppressor gene q11.21 Seq+ 17836 ChimerSeq STARFusion TCGA_RNA-Seq DGCR8-COMT DGCR8 chr22 20067906 + COMT chr22 19950050 + Exonic hg19 BLCA TCGA-UY-A78K-01A 12 75 5'UTR-5'UTR Intra-chr q11.21 q11.21 Seq+ 17837 ChimerSeq STARFusion TCGA_RNA-Seq MKRN2-PPARG MKRN2 chr3 12598675 + PPARG chr3 12353879 + Exonic hg19 BLCA TCGA-UY-A78K-01A 5 25 CDS-5'UTR Intra-chr p25.2 p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 17838 ChimerSeq STARFusion TCGA_RNA-Seq RPUSD3-EMC3 RPUSD3 chr3 9883667 - EMC3 chr3 10019130 - Exonic hg19 BLCA TCGA-UY-A78K-01A 7 15 Out-of-frame Intra-chr p25.3 p25.3 17839 ChimerSeq STARFusion TCGA_RNA-Seq FNIP1-ACSL6 FNIP1 chr5 131080257 - ACSL6 chr5 131298371 - Exonic hg19 BLCA TCGA-UY-A78K-01A 4 17 In-Frame Intra-chr q31.1 q31.1 Seq+ 17840 ChimerSeq STARFusion TCGA_RNA-Seq MKRN2-PPARG MKRN2 chr3 12598675 + PPARG chr3 12421203 + Exonic hg19 BLCA TCGA-UY-A78K-01A 2 25 Out-of-frame Intra-chr p25.2 p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 17841 ChimerSeq STARFusion TCGA_RNA-Seq ARPC1A-TH ARPC1A chr7 98942138 + TH chr11 2191101 - Exonic hg19 BLCA TCGA-UY-A78K-01A 2 16 Out-of-frame Inter-chr q22.1 p15.5 Seq+ 17842 ChimerSeq STARFusion TCGA_RNA-Seq MGAT4A-KIAA1211L MGAT4A chr2 99342702 - KIAA1211L chr2 99463273 - Exonic hg19 BLCA TCGA-UY-A78K-01A 3 8 Out-of-frame Intra-chr q11.2 q11.2 17843 ChimerSeq STARFusion TCGA_RNA-Seq TBCB-PRX TBCB chr19 36610200 + PRX chr19 40902382 - Exonic hg19 BLCA TCGA-UY-A78K-01A 3 5 Out-of-frame Intra-chr q13.12 q13.2 Seq+ 17844 ChimerSeq STARFusion TCGA_RNA-Seq FAM73B-NUP188 FAM73B chr9 131831408 + NUP188 chr9 131755476 + Exonic hg19 BLCA TCGA-UY-A78K-01A 2 6 In-Frame Intra-chr q34.11 Seq+ 17845 ChimerSeq STARFusion TCGA_RNA-Seq ANO1-CWF19L2 ANO1 chr11 69978185 + CWF19L2 chr11 107313775 - Exonic hg19 BLCA TCGA-CF-A8HX-01A 5 18 Out-of-frame Intra-chr q13.3 q22.3 Seq+ 17846 ChimerSeq STARFusion TCGA_RNA-Seq VPS35-PHKB VPS35 chr16 46723043 - PHKB chr16 47730292 + Exonic hg19 BLCA TCGA-DK-A2I1-01A 36 30 In-Frame Intra-chr q11.2 q12.1 Seq+ 17847 ChimerSeq STARFusion TCGA_RNA-Seq DGUOK-STAMBP DGUOK chr2 74154179 + STAMBP chr2 74086381 + Exonic hg19 BLCA TCGA-DK-A2I1-01A 8 24 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 17848 ChimerSeq STARFusion TCGA_RNA-Seq SMG9-KCNN4 SMG9 chr19 44241749 - KCNN4 chr19 44271241 - Exonic hg19 BLCA TCGA-DK-A2I1-01A 5 26 CDS-3'UTR Intra-chr q13.31 q13.31 Seq+ 17849 ChimerSeq STARFusion TCGA_RNA-Seq TSEN2-PPARG TSEN2 chr3 12545283 + PPARG chr3 12458203 + Exonic hg19 BLCA TCGA-DK-A2I1-01A 4 19 In-Frame Intra-chr p25.2 p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 17850 ChimerSeq STARFusion TCGA_RNA-Seq TSEN2-PPARG TSEN2 chr3 12526379 + PPARG chr3 12447381 + Exonic hg19 BLCA TCGA-DK-A2I1-01A 2 19 5'UTR-CDS Intra-chr p25.2 p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 17851 ChimerSeq STARFusion TCGA_RNA-Seq TSEN2-PPARG TSEN2 chr3 12546730 + PPARG chr3 12458203 + Exonic hg19 BLCA TCGA-DK-A2I1-01A 2 19 In-Frame Intra-chr p25.2 p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 17852 ChimerSeq STARFusion TCGA_RNA-Seq DIRAS2-GNA14 DIRAS2 chr9 93405034 - GNA14 chr9 80049438 - Exonic hg19 BLCA TCGA-DK-A2I1-01A 5 5 5'UTR-CDS Intra-chr q22.2 q21.2 Seq+ 17853 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-CCDC113 NFAT5 chr16 69602451 + CCDC113 chr16 58286631 + Exonic hg19 BLCA TCGA-DK-A2I1-01A 3 8 Out-of-frame Intra-chr q22.1 Transcription factor q21 Seq+ 17854 ChimerSeq STARFusion TCGA_RNA-Seq RBL1-MROH8 RBL1 chr20 35724176 - MROH8 chr20 35729821 - Exonic hg19 BLCA TCGA-DK-A2I1-01A 2 4 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q11.23 17855 ChimerSeq STARFusion TCGA_RNA-Seq PPM1D-BCAS3 PPM1D chr17 58711338 + BCAS3 chr17 58885365 + Exonic hg19 BLCA TCGA-DK-A2I1-01A 2 2 In-Frame Intra-chr q23.2 q23.2 17856 ChimerSeq STARFusion TCGA_RNA-Seq FBLN1-CNBP FBLN1 chr22 45898944 + CNBP chr3 128890614 - Exonic hg19 BLCA TCGA-DK-A2I1-01A 2 1 CDS-5'UTR Inter-chr q13.31 Tumor suppressor gene q21.3 17857 ChimerSeq STARFusion TCGA_RNA-Seq NFIX-CRYBB3 NFIX chr19 13106678 + CRYBB3 chr22 25597344 + Exonic hg19 BLCA TCGA-E7-A4IJ-01A 4 7 CDS-5'UTR Inter-chr p13.13 Transcription factor q11.23 Seq+ 17858 ChimerSeq STARFusion TCGA_RNA-Seq TTC28-ARHGAP15 TTC28 chr22 28559080 - ARHGAP15 chr2 144525558 + Exonic hg19 BLCA TCGA-E7-A4IJ-01A 2 8 Out-of-frame Inter-chr q12.1 q22.2 Seq+ 17859 ChimerSeq STARFusion TCGA_RNA-Seq MPHOSPH9-VPS37B MPHOSPH9 chr12 123678933 - VPS37B chr12 123355608 - Exonic hg19 BLCA TCGA-E7-A4IJ-01A 2 3 In-Frame Intra-chr q24.31 q24.31 Seq+ 17860 ChimerSeq STARFusion TCGA_RNA-Seq SLFN11-CCL14 SLFN11 chr17 33693966 - CCL14 chr17 34310924 - Exonic hg19 BLCA TCGA-UY-A9PD-01A 17 155 5'UTR-CDS Intra-chr q12 q12 Seq+ 17861 ChimerSeq STARFusion TCGA_RNA-Seq SLFN11-CCL14 SLFN11 chr17 33700493 - CCL14 chr17 34310924 - Exonic hg19 BLCA TCGA-UY-A9PD-01A 2 155 5'UTR-CDS Intra-chr q12 q12 Seq+ 17862 ChimerSeq STARFusion TCGA_RNA-Seq SPSB3-IFT140 SPSB3 chr16 1831359 - IFT140 chr16 1561151 - Exonic hg19 BLCA TCGA-UY-A9PD-01A 13 59 In-Frame Intra-chr p13.3 p13.3 Seq+ 17863 ChimerSeq STARFusion TCGA_RNA-Seq DHX8-FMO5 DHX8 chr17 41561553 + FMO5 chr1 146661828 - Exonic hg19 BLCA TCGA-UY-A9PD-01A 7 38 In-Frame Inter-chr q21.31 q21.1 Seq+ 17864 ChimerSeq STARFusion TCGA_RNA-Seq CDK12-TAF15 CDK12 chr17 37682569 + TAF15 chr17 34169371 + Exonic hg19 BLCA TCGA-UY-A9PD-01A 4 32 In-Frame Intra-chr q12 Oncogene q12 Seq+ 17865 ChimerSeq STARFusion TCGA_RNA-Seq PSMD11-DPRX PSMD11 chr17 30781637 + DPRX chr19 54137785 + Exonic hg19 BLCA TCGA-UY-A9PD-01A 3 21 Out-of-frame Inter-chr q11.2 q13.42 Transcription factor Seq+ 17866 ChimerSeq STARFusion TCGA_RNA-Seq PHF12-PIPOX PHF12 chr17 27277083 - PIPOX chr17 27371877 + Exonic hg19 BLCA TCGA-UY-A9PD-01A 4 8 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 17867 ChimerSeq STARFusion TCGA_RNA-Seq HNF1B-TBC1D3F HNF1B chr17 36091586 - TBC1D3F chr17 36343995 - Exonic hg19 BLCA TCGA-UY-A9PD-01A 2 5 CDS-3'UTR Intra-chr q12 Transcription factor q12 17868 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-LINC00673 SLC39A11 chr17 71080947 - LINC00673 chr17 70427365 - Exonic hg19 BLCA TCGA-UY-A9PD-01A 2 5 Out-of-frame Intra-chr q25.1 17869 ChimerSeq STARFusion TCGA_RNA-Seq PTBP3-SUSD1 PTBP3 chr9 115060121 - SUSD1 chr9 114919893 - Exonic hg19 BLCA TCGA-UY-A9PD-01A 2 4 In-Frame Intra-chr q32 q32 17870 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT4-IGSF11 B4GALT4 chr3 118935087 - IGSF11 chr3 118831625 - Exonic hg19 BLCA TCGA-UY-A9PD-01A 2 1 CDS-5'UTR Intra-chr q13.32 q13.32 17871 ChimerSeq STARFusion TCGA_RNA-Seq CCBP2-KRBOX1 CCBP2 chr3 42861203 + KRBOX1 chr3 42980342 + Exonic hg19 BLCA TCGA-2F-A9KQ-01A 2 3 5'UTR-5'UTR Intra-chr p22.1 Seq+ 17872 ChimerSeq STARFusion TCGA_RNA-Seq GNA12-CARD11 GNA12 chr7 2834562 - CARD11 chr7 2974263 - Exonic hg19 BLCA TCGA-BT-A20R-01A 10 17 In-Frame Intra-chr p22.2 p22.2 Oncogene Seq+ 17873 ChimerSeq STARFusion TCGA_RNA-Seq NEDD4L-HYI NEDD4L chr18 55919286 + HYI chr1 43917990 - Exonic hg19 BLCA TCGA-BT-A20R-01A 2 10 Out-of-frame Inter-chr q21.31 Tumor suppressor gene p34.2 Seq+ 17874 ChimerSeq STARFusion TCGA_RNA-Seq GUCY1A3-SIK3 GUCY1A3 chr4 156588571 + SIK3 chr11 116827780 - Exonic hg19 BLCA TCGA-BT-A20R-01A 2 1 5'UTR-CDS Inter-chr q32.1 q23.3 Seq+ 17875 ChimerSeq STARFusion TCGA_RNA-Seq BAG4-WRN BAG4 chr8 38050313 + WRN chr8 31012140 + Exonic hg19 BLCA TCGA-FD-A62O-01A 11 66 In-Frame Intra-chr p11.23 p12 Oncogene Seq+ 17876 ChimerSeq STARFusion TCGA_RNA-Seq DHRS2-GSTM2 DHRS2 chr14 24105981 + GSTM2 chr1 110213909 + Exonic hg19 BLCA TCGA-FD-A62O-01A 12 41 5'UTR-CDS Inter-chr q11.2 p13.3 17877 ChimerSeq STARFusion TCGA_RNA-Seq ZNF570-ECH1 ZNF570 chr19 37967336 + ECH1 chr19 39322430 - Exonic hg19 BLCA TCGA-K4-AAQO-01A 5 39 CDS-5'UTR Intra-chr q13.12 Transcription factor Seq+ 17878 ChimerSeq STARFusion TCGA_RNA-Seq CNNM4-NEURL3 CNNM4 chr2 97428138 + NEURL3 chr2 97166661 - Exonic hg19 BLCA TCGA-K4-AAQO-01A 2 9 CDS-3'UTR Intra-chr q11.2 q11.2 Seq+ 17879 ChimerSeq STARFusion TCGA_RNA-Seq MYOCD-ARHGAP44 MYOCD chr17 12664024 + ARHGAP44 chr17 12798257 + Exonic hg19 BLCA TCGA-K4-AAQO-01A 2 0 Out-of-frame Intra-chr p12 p12 Seq+ 17880 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 BLCA TCGA-ZF-AA4N-01A 3 1 CDS-5'UTR Intra-chr p12 p12 Transcription factor 17881 ChimerSeq STARFusion TCGA_RNA-Seq USP4-CCDC13 USP4 chr3 49348053 - CCDC13 chr3 42799843 - Exonic hg19 BLCA TCGA-ZF-AA4N-01A 2 4 CDS-5'UTR Intra-chr p21.31 p22.1 Seq+ 17882 ChimerSeq STARFusion TCGA_RNA-Seq PRUNE-LCE2A PRUNE chr1 150990380 + LCE2A chr1 152671358 + Exonic hg19 BLCA TCGA-UY-A78N-01A 25 119 CDS-5'UTR Intra-chr q21.3 Seq+ 17883 ChimerSeq STARFusion TCGA_RNA-Seq UBE4B-APITD1 UBE4B chr1 10093752 + APITD1 chr1 10500404 + Exonic hg19 BLCA TCGA-UY-A78N-01A 18 69 Out-of-frame Intra-chr p36.22 Tumor suppressor gene Tumor suppressor gene Seq+ 17884 ChimerSeq STARFusion TCGA_RNA-Seq PRUNE-LCE2A PRUNE chr1 150991145 + LCE2A chr1 152671358 + Exonic hg19 BLCA TCGA-UY-A78N-01A 5 119 CDS-5'UTR Intra-chr q21.3 Seq+ 17885 ChimerSeq STARFusion TCGA_RNA-Seq UBE4B-APITD1 UBE4B chr1 10093754 + APITD1 chr1 10490519 + Exonic hg19 BLCA TCGA-UY-A78N-01A 7 69 Out-of-frame Intra-chr p36.22 Tumor suppressor gene Tumor suppressor gene Seq+ 17886 ChimerSeq STARFusion TCGA_RNA-Seq UBE4B-APITD1 UBE4B chr1 10093752 + APITD1 chr1 10493899 + Exonic hg19 BLCA TCGA-UY-A78N-01A 5 69 In-Frame Intra-chr p36.22 Tumor suppressor gene Tumor suppressor gene Seq+ 17887 ChimerSeq STARFusion TCGA_RNA-Seq MYCBP2-CPB2 MYCBP2 chr13 77862296 - CPB2 chr13 46638876 - Exonic hg19 BLCA TCGA-UY-A78N-01A 13 25 In-Frame Intra-chr q22.3 q14.13 Seq+ 17888 ChimerSeq STARFusion TCGA_RNA-Seq ITCH-ARFGAP1 ITCH chr20 33069011 + ARFGAP1 chr20 61914171 + Exonic hg19 BLCA TCGA-UY-A78N-01A 10 27 Out-of-frame Intra-chr q11.22 q13.33 Seq+ 17889 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-LOC653513 WARS2 chr1 119618973 - LOC653513 chr1 144679969 - Exonic hg19 BLCA TCGA-UY-A78N-01A 7 18 CDS-3'UTR Intra-chr p12 17890 ChimerSeq STARFusion TCGA_RNA-Seq UBE4B-CORT UBE4B chr1 10093752 + CORT chr1 10511434 + Exonic hg19 BLCA TCGA-UY-A78N-01A 5 9 In-Frame Intra-chr p36.22 Tumor suppressor gene p36.22 Seq+ 17891 ChimerSeq STARFusion TCGA_RNA-Seq FAF1-CHIA FAF1 chr1 51121114 - CHIA chr1 111857162 + Exonic hg19 BLCA TCGA-UY-A78N-01A 4 12 Out-of-frame Intra-chr p32.3 p13.2 Seq+ 17892 ChimerSeq STARFusion TCGA_RNA-Seq DGCR2-SERINC2 DGCR2 chr22 19050715 - SERINC2 chr1 31905814 + Exonic hg19 BLCA TCGA-UY-A78N-01A 2 5 Out-of-frame Inter-chr q11.21 p35.2 Seq+ 17893 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF4-C20orf203 TM9SF4 chr20 30742989 + C20orf203 chr20 31239783 - Exonic hg19 BLCA TCGA-UY-A78N-01A 2 3 CDS-5'UTR Intra-chr q11.21 q11.21 17894 ChimerSeq STARFusion TCGA_RNA-Seq GSTP1-ELP4 GSTP1 chr11 67354008 + ELP4 chr11 31671663 + Exonic hg19 BLCA TCGA-2F-A9KT-01A 12 17 In-Frame Intra-chr q13.2 Tumor suppressor gene p13 Seq+ 17895 ChimerSeq STARFusion TCGA_RNA-Seq RALY-TTI1 RALY chr20 32619410 + TTI1 chr20 36634799 - Exonic hg19 BLCA TCGA-2F-A9KT-01A 5 26 5'UTR-CDS Intra-chr q11.22 q11.23 Seq+ 17896 ChimerSeq STARFusion TCGA_RNA-Seq CDC42BPG-EHD1 CDC42BPG chr11 64611882 - EHD1 chr11 64627808 - Exonic hg19 BLCA TCGA-2F-A9KT-01A 5 7 In-Frame Intra-chr q13.1 q13.1 Seq+ 17897 ChimerSeq STARFusion TCGA_RNA-Seq GSTP1-ELP4 GSTP1 chr11 67353682 + ELP4 chr11 31671663 + Exonic hg19 BLCA TCGA-2F-A9KT-01A 2 17 Out-of-frame Intra-chr q13.2 Tumor suppressor gene p13 Seq+ 17898 ChimerSeq STARFusion TCGA_RNA-Seq DHX35-MYO7A DHX35 chr20 37630485 + MYO7A chr11 76908526 + Exonic hg19 BLCA TCGA-2F-A9KT-01A 4 4 Out-of-frame Inter-chr q11.23 q13.5 Seq+ 17899 ChimerSeq STARFusion TCGA_RNA-Seq CACNA1I-SYNGR1 CACNA1I chr22 40069087 + SYNGR1 chr22 39777701 + Exonic hg19 BLCA TCGA-2F-A9KT-01A 2 7 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 17900 ChimerSeq STARFusion TCGA_RNA-Seq WWP2-SNTB2 WWP2 chr16 69796294 + SNTB2 chr16 69333493 + Exonic hg19 BLCA TCGA-2F-A9KT-01A 2 1 5'UTR-CDS Intra-chr q22.1 17901 ChimerSeq STARFusion TCGA_RNA-Seq WWP2-SNTB2 WWP2 chr16 69810144 + SNTB2 chr16 69333493 + Exonic hg19 BLCA TCGA-2F-A9KT-01A 2 1 5'UTR-CDS Intra-chr q22.1 17902 ChimerSeq STARFusion TCGA_RNA-Seq CCNT1-LALBA CCNT1 chr12 49099551 - LALBA chr12 48961800 - Exonic hg19 BLCA TCGA-ZF-A9RM-01A 16 64 Out-of-frame Intra-chr q13.12 q13.11 Seq+ 17903 ChimerSeq STARFusion TCGA_RNA-Seq MED13L-WSCD2 MED13L chr12 116675273 - WSCD2 chr12 108618516 + Exonic hg19 BLCA TCGA-ZF-A9RM-01A 5 35 In-Frame Intra-chr q24.21 q23.3 Seq+ 17904 ChimerSeq STARFusion TCGA_RNA-Seq CARM1-LOC100507412 CARM1 chr19 10982598 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BLCA TCGA-ZF-A9RM-01A 8 14 CDS-5'UTR Inter-chr p13.2 17905 ChimerSeq STARFusion TCGA_RNA-Seq MED13L-WSCD2 MED13L chr12 116675273 - WSCD2 chr12 108603898 + Exonic hg19 BLCA TCGA-ZF-A9RM-01A 2 35 Out-of-frame Intra-chr q24.21 q23.3 Seq+ 17906 ChimerSeq STARFusion TCGA_RNA-Seq KANK1-DMRT1 KANK1 chr9 504754 + DMRT1 chr9 893912 + Exonic hg19 BLCA TCGA-ZF-A9RM-01A 4 0 5'UTR-CDS Intra-chr p24.3 Tumor suppressor gene p24.3 Transcription factor Seq+ 17907 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPF-TMLHE HNRNPF chr10 43890078 - TMLHE chrX 154774938 - Exonic hg19 BLCA TCGA-ZF-A9RM-01A 2 5 5'UTR-5'UTR Inter-chr q11.21 q28 Seq+ 17908 ChimerSeq STARFusion TCGA_RNA-Seq SSH1-IFT81 SSH1 chr12 109246414 - IFT81 chr12 110565165 + Exonic hg19 BLCA TCGA-ZF-A9RM-01A 3 1 CDS-5'UTR Intra-chr q24.11 q24.11 Seq+ 17909 ChimerSeq STARFusion TCGA_RNA-Seq UNC45A-MAN2A2 UNC45A chr15 91486312 + MAN2A2 chr15 91448481 + Exonic hg19 BLCA TCGA-ZF-A9RM-01A 2 5 Out-of-frame Intra-chr q26.1 q26.1 Seq+ 17910 ChimerSeq STARFusion TCGA_RNA-Seq VCL-ADK VCL chr10 75802911 + ADK chr10 75960522 + Exonic hg19 BLCA TCGA-GU-A762-01A 8 48 In-Frame Intra-chr q22.2 q22.2 Seq+ 17911 ChimerSeq STARFusion TCGA_RNA-Seq ANXA8L2-LINC00842 ANXA8L2 chr10 47747132 + LINC00842 chr10 47099714 - Exonic hg19 BLCA TCGA-GU-A762-01A 3 5 Out-of-frame Intra-chr 17912 ChimerSeq STARFusion TCGA_RNA-Seq SHB-EXOSC3 SHB chr9 38067926 - EXOSC3 chr9 37784060 - Exonic hg19 BLCA TCGA-GU-A762-01A 2 3 In-Frame Intra-chr p13.1 p13.2 17913 ChimerSeq STARFusion TCGA_RNA-Seq B3GALTL-TEX26 B3GALTL chr13 31835219 + TEX26 chr13 31548983 + Exonic hg19 BLCA TCGA-BL-A13J-01B 5 18 Out-of-frame Intra-chr q12.3 17914 ChimerSeq STARFusion TCGA_RNA-Seq USP34-FAM161A USP34 chr2 61486846 - FAM161A chr2 62054393 - Exonic hg19 BLCA TCGA-BL-A13J-01B 3 22 In-Frame Intra-chr p15 p15 Seq+ 17915 ChimerSeq STARFusion TCGA_RNA-Seq HDAC4-SATB2 HDAC4 chr2 240158289 - SATB2 chr2 200325255 - Exonic hg19 BLCA TCGA-BL-A13J-01B 3 6 CDS-5'UTR Intra-chr q37.3 q33.1 Transcription factor Seq+ 17916 ChimerSeq STARFusion TCGA_RNA-Seq FAM102B-SLC25A24 FAM102B chr1 109143308 + SLC25A24 chr1 108728576 - Exonic hg19 BLCA TCGA-BL-A13J-01B 2 8 In-Frame Intra-chr p13.3 Seq+ 17917 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-RMRP RNA45S5 chrUn_gl000220 118502 + RMRP chr9 35657960 - Exonic hg19 BLCA TCGA-BL-A13J-01B 3 2 Out-of-frame Inter-chr p13.3 17918 ChimerSeq STARFusion TCGA_RNA-Seq DENND4C-ACER2 DENND4C chr9 19230831 + ACER2 chr9 19446279 + Exonic hg19 BLCA TCGA-BL-A13J-01B 2 1 5'UTR-CDS Intra-chr p22.1 p22.1 Seq+ 17919 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57746301 + VMP1 chr17 57915656 + Exonic hg19 BLCA TCGA-GC-A3YS-01A 33 72 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 17920 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-CHST4 NFAT5 chr16 69600277 + CHST4 chr16 71570563 + Exonic hg19 BLCA TCGA-GC-A3YS-01A 8 18 5'UTR-5'UTR Intra-chr q22.1 Transcription factor q22.2 Seq+ 17921 ChimerSeq STARFusion TCGA_RNA-Seq ELP2-MOCOS ELP2 chr18 33713279 + MOCOS chr18 33828885 + Exonic hg19 BLCA TCGA-GC-A3YS-01A 3 14 In-Frame Intra-chr q12.2 q12.2 17922 ChimerSeq STARFusion TCGA_RNA-Seq ZNF568-SPDYE6 ZNF568 chr19 37465368 + SPDYE6 chr7 101987661 - Exonic hg19 BLCA TCGA-GC-A3YS-01A 3 1 CDS-3'UTR Inter-chr q13.12 Transcription factor q22.1 17923 ChimerSeq STARFusion TCGA_RNA-Seq TGFB1-FXYD5 TGFB1 chr19 41838033 - FXYD5 chr19 35655059 + Exonic hg19 BLCA TCGA-FD-A3SO-01A 14 40 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.12 Seq+ 17924 ChimerSeq STARFusion TCGA_RNA-Seq TOMM40-PDZRN4 TOMM40 chr19 45397323 + PDZRN4 chr12 41900258 + Exonic hg19 BLCA TCGA-FD-A3SO-01A 2 20 Out-of-frame Inter-chr q13.32 q12 Seq+ 17925 ChimerSeq STARFusion TCGA_RNA-Seq TRIM29-KPNA3 TRIM29 chr11 119998256 - KPNA3 chr13 50366614 - Exonic hg19 BLCA TCGA-FD-A3SO-01A 3 1 Out-of-frame Inter-chr q23.3 q14.2 17926 ChimerSeq STARFusion TCGA_RNA-Seq GNG5-TBC1D12 GNG5 chr1 84971694 - TBC1D12 chr10 96269848 + Exonic hg19 BLCA TCGA-FD-A3SO-01A 2 0 Out-of-frame Inter-chr p22.3 q23.33 17927 ChimerSeq STARFusion TCGA_RNA-Seq SRP68-CDK3 SRP68 chr17 74042119 - CDK3 chr17 74001379 + Exonic hg19 BLCA TCGA-ZF-AA51 4 10 CDS-5'UTR Intra-chr q25.1 q25.1 CMGC:CDK Seq+ 17928 ChimerSeq STARFusion TCGA_RNA-Seq MARK2-C11orf84 MARK2 chr11 63607032 + C11orf84 chr11 63585277 + Exonic hg19 BLCA TCGA-ZF-AA51 3 4 Out-of-frame Intra-chr q13.1 CAMK:CAMKL q13.1 Seq+ 17929 ChimerSeq STARFusion TCGA_RNA-Seq PTPN6-LRRC23 PTPN6 chr12 7061340 + LRRC23 chr12 7014749 + Exonic hg19 BLCA TCGA-ZF-AA51 2 2 CDS-5'UTR Intra-chr p13.31 Tumor suppressor gene p13.31 Seq+ 17930 ChimerSeq STARFusion TCGA_RNA-Seq MORC3-DOPEY2 MORC3 chr21 37717329 + DOPEY2 chr21 37642311 + Exonic hg19 BLCA TCGA-K4-A3WV-01A 12 58 In-Frame Intra-chr q22.12 q22.12 Seq+ 17931 ChimerSeq STARFusion TCGA_RNA-Seq JARID2-PPP1R10 JARID2 chr6 15374483 + PPP1R10 chr6_dbb_hap3 1878413 - Exonic hg19 BLCA TCGA-K4-A3WV-01A 4 59 CDS-3'UTR Inter-chr p22.3 Seq+ 17932 ChimerSeq STARFusion TCGA_RNA-Seq BRAF-MRPS33 BRAF chr7 140624366 - MRPS33 chr7 140706335 - Exonic hg19 BLCA TCGA-K4-A3WV-01A 3 55 Out-of-frame Intra-chr q34 TKL:RAF Oncogene q34 Seq+ 17933 ChimerSeq STARFusion TCGA_RNA-Seq BRAF-MRPS33 BRAF chr7 140624366 - MRPS33 chr7 140710460 - Exonic hg19 BLCA TCGA-K4-A3WV-01A 2 55 CDS-5'UTR Intra-chr q34 TKL:RAF Oncogene q34 Seq+ 17934 ChimerSeq STARFusion TCGA_RNA-Seq LRRC16A-CTSW LRRC16A chr6 25581667 + CTSW chr11 65648878 + Exonic hg19 BLCA TCGA-K4-A3WV-01A 5 27 Out-of-frame Inter-chr q13.1 Seq+ 17935 ChimerSeq STARFusion TCGA_RNA-Seq SETMAR-SUMF1 SETMAR chr3 4345210 + SUMF1 chr3 4403938 - Exonic hg19 BLCA TCGA-K4-A3WV-01A 4 28 In-Frame Intra-chr p26.1 p26.1 Seq+ 17936 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-MSL1 WIPF2 chr17 38375744 + MSL1 chr17 38282436 + Exonic hg19 BLCA TCGA-K4-A3WV-01A 5 12 5'UTR-5'UTR Intra-chr q21.2 q21.1 Seq+ 17937 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHH1-GPHN PLEKHH1 chr14 68028752 + GPHN chr14 67525366 + Exonic hg19 BLCA TCGA-K4-A3WV-01A 4 12 In-Frame Intra-chr q24.1 q23.3 Seq+ 17938 ChimerSeq STARFusion TCGA_RNA-Seq GMDS-MRPS18B GMDS chr6 1726650 - MRPS18B chr6_dbb_hap3 1884247 + Exonic hg19 BLCA TCGA-K4-A3WV-01A 4 5 CDS-5'UTR Inter-chr p25.3 Seq+ 17939 ChimerSeq STARFusion TCGA_RNA-Seq SPEN-FBLIM1 SPEN chr1 16203173 + FBLIM1 chr1 16090991 + Exonic hg19 BLCA TCGA-K4-A3WV-01A 3 9 CDS-5'UTR Intra-chr p36.21 Transcription factor p36.21 Seq+ 17940 ChimerSeq STARFusion TCGA_RNA-Seq STRBP-DENND1A STRBP chr9 126030715 - DENND1A chr9 126165769 - Exonic hg19 BLCA TCGA-K4-A3WV-01A 2 6 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 17941 ChimerSeq STARFusion TCGA_RNA-Seq SEPT6-CUL4B SEPT6 chrX 118763281 - CUL4B chrX 119708485 - Exonic hg19 BLCA TCGA-K4-A3WV-01A 2 5 CDS-5'UTR Intra-chr q24 q24 Seq+ 17942 ChimerSeq STARFusion TCGA_RNA-Seq GMDS-MRPS18B GMDS chr6 1726650 - MRPS18B chr6_ssto_hap7 1922888 + Exonic hg19 BLCA TCGA-K4-A3WV-01A 2 4 CDS-5'UTR Inter-chr p25.3 Seq+ 17943 ChimerSeq STARFusion TCGA_RNA-Seq SERPINB6-ANXA2 SERPINB6 chr6 2971767 - ANXA2 chr15 60678285 - Exonic hg19 BLCA TCGA-K4-A3WV-01A 2 1 5'UTR-5'UTR Inter-chr p25.2 q22.2 Seq+ 17944 ChimerSeq STARFusion TCGA_RNA-Seq CCDC90A-LOC400084 CCDC90A chr6 13799065 - LOC400084 chr12 126451888 - Exonic hg19 BLCA TCGA-K4-A3WV-01A 2 0 CDS-3'UTR Inter-chr 17945 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 BLCA TCGA-BT-A0YX-01A 2 2 3'UTR-5'UTR Intra-chr q34 17946 ChimerSeq STARFusion TCGA_RNA-Seq COL5A1-PTGES2 COL5A1 chr9 137677894 + PTGES2 chr9 130887720 - Exonic hg19 BLCA TCGA-GD-A3OS-01A 53 208 In-Frame Intra-chr q34.3 q34.11 Seq+ 17947 ChimerSeq STARFusion TCGA_RNA-Seq TRUB2-KCNT1 TRUB2 chr9 131083878 - KCNT1 chr9 138641944 + Exonic hg19 BLCA TCGA-GD-A3OS-01A 18 53 Out-of-frame Intra-chr q34.11 q34.3 Seq+ 17948 ChimerSeq STARFusion TCGA_RNA-Seq STAM2-NOSTRIN STAM2 chr2 153032117 - NOSTRIN chr2 169687982 + Exonic hg19 BLCA TCGA-GD-A3OS-01A 12 52 Out-of-frame Intra-chr q23.3 Seq+ 17949 ChimerSeq STARFusion TCGA_RNA-Seq TMEM127-STAM TMEM127 chr2 96931607 - STAM chr10 17726674 + Exonic hg19 BLCA TCGA-GD-A3OS-01A 8 65 5'UTR-CDS Inter-chr q11.2 Tumor suppressor gene p12.33 Seq+ 17950 ChimerSeq STARFusion TCGA_RNA-Seq STAM2-NOSTRIN STAM2 chr2 153032117 - NOSTRIN chr2 169690737 + Exonic hg19 BLCA TCGA-GD-A3OS-01A 7 52 Out-of-frame Intra-chr q23.3 Seq+ 17951 ChimerSeq STARFusion TCGA_RNA-Seq PDGFD-DCUN1D5 PDGFD chr11 104034532 - DCUN1D5 chr11 102933143 - Exonic hg19 BLCA TCGA-GD-A3OS-01A 10 26 In-Frame Intra-chr q22.3 q22.3 Seq+ 17952 ChimerSeq STARFusion TCGA_RNA-Seq STAM2-NOSTRIN STAM2 chr2 153032117 - NOSTRIN chr2 169699502 + Exonic hg19 BLCA TCGA-GD-A3OS-01A 2 52 Out-of-frame Intra-chr q23.3 Seq+ 17953 ChimerSeq STARFusion TCGA_RNA-Seq TRIM28-CHMP2A TRIM28 chr19 59061651 + CHMP2A chr19 59063805 - Exonic hg19 BLCA TCGA-GD-A3OS-01A 4 12 In-Frame Intra-chr q13.43 q13.43 Seq+ 17954 ChimerSeq STARFusion TCGA_RNA-Seq PLXDC2-VAMP5 PLXDC2 chr10 20106120 + VAMP5 chr2 85818848 + Exonic hg19 BLCA TCGA-GD-A3OS-01A 3 12 Out-of-frame Inter-chr p12.31 p11.2 Seq+ 17955 ChimerSeq STARFusion TCGA_RNA-Seq CYFIP1-TUBGCP5 CYFIP1 chr15 22892781 + TUBGCP5 chr15 22853734 + Exonic hg19 BLCA TCGA-GD-A3OS-01A 2 10 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 17956 ChimerSeq STARFusion TCGA_RNA-Seq CYFIP1-TUBGCP5 CYFIP1 chr15 22892781 + TUBGCP5 chr15 22861737 + Exonic hg19 BLCA TCGA-GD-A3OS-01A 2 10 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 17957 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-KIAA1377 TMEM123 chr11 102272270 - KIAA1377 chr11 101814996 + Exonic hg19 BLCA TCGA-GD-A3OS-01A 3 4 In-Frame Intra-chr q22.2 17958 ChimerSeq STARFusion TCGA_RNA-Seq FBXL19-COL4A2 FBXL19 chr16 30939218 + COL4A2 chr13 111156492 + Exonic hg19 BLCA TCGA-GD-A3OS-01A 3 1 Out-of-frame Inter-chr p11.2 Transcription factor q34 17959 ChimerSeq STARFusion TCGA_RNA-Seq GMDS-LOC285768 GMDS chr6 2116005 - LOC285768 chr6 1005763 - Exonic hg19 BLCA TCGA-GD-A3OS-01A 2 4 CDS-3'UTR Intra-chr p25.3 17960 ChimerSeq STARFusion TCGA_RNA-Seq NNMT-RBM7 NNMT chr11 114168880 + RBM7 chr11 114272420 + Exonic hg19 BLCA TCGA-GD-A3OS-01A 2 1 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 17961 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-RB1CC1 TAOK1 chr17 27809306 + RB1CC1 chr8 53555372 - Exonic hg19 BLCA TCGA-DK-A1AC-01A 41 95 Out-of-frame Inter-chr q11.2 q11.23 Tumor suppressor gene Seq+ 17962 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD1-RHOT1 PCMTD1 chr8 52773405 - RHOT1 chr17 30509776 + Exonic hg19 BLCA TCGA-DK-A1AC-01A 28 81 Out-of-frame Inter-chr q11.23 q11.2 Seq+ 17963 ChimerSeq STARFusion TCGA_RNA-Seq SUV420H1-MYO1D SUV420H1 chr11 67947599 - MYO1D chr17 30965853 - Exonic hg19 BLCA TCGA-DK-A1AC-01A 11 42 Out-of-frame Inter-chr q11.2 Seq+ 17964 ChimerSeq STARFusion TCGA_RNA-Seq SUV420H1-MYO1D SUV420H1 chr11 67953248 - MYO1D chr17 30965853 - Exonic hg19 BLCA TCGA-DK-A1AC-01A 2 42 Out-of-frame Inter-chr q11.2 Seq+ 17965 ChimerSeq STARFusion TCGA_RNA-Seq TTC7B-RPS6KA5 TTC7B chr14 91282519 - RPS6KA5 chr14 91341704 - Exonic hg19 BLCA TCGA-DK-A1AC-01A 5 11 Out-of-frame Intra-chr q32.11 q32.11 Seq+ 17966 ChimerSeq STARFusion TCGA_RNA-Seq STAU1-ZFAS1 STAU1 chr20 47768119 - ZFAS1 chr20 47905582 + Exonic hg19 BLCA TCGA-DK-A1AC-01A 2 2 Out-of-frame Intra-chr q13.13 q13.13 Tumor suppressor gene 17967 ChimerSeq STARFusion TCGA_RNA-Seq UNC13D-ACOX1 UNC13D chr17 73831490 - ACOX1 chr17 73939294 - Exonic hg19 BLCA TCGA-FJ-A3ZF-01A 14 71 CDS-3'UTR Intra-chr q25.1 q25.1 Seq+ 17968 ChimerSeq STARFusion TCGA_RNA-Seq SF3B1-HSPD1 SF3B1 chr2 198274494 - HSPD1 chr2 198355020 - Exonic hg19 BLCA TCGA-FJ-A3ZF-01A 5 49 Out-of-frame Intra-chr q33.1 Oncogene q33.1 Tumor suppressor gene Seq+ 17969 ChimerSeq STARFusion TCGA_RNA-Seq ZNF613-SIGLEC7 ZNF613 chr19 52433149 + SIGLEC7 chr19 51656320 + Exonic hg19 BLCA TCGA-FJ-A3ZF-01A 7 34 5'UTR-CDS Intra-chr q13.41 Transcription factor q13.41 Seq+ 17970 ChimerSeq STARFusion TCGA_RNA-Seq ZNF613-SIGLEC7 ZNF613 chr19 52433077 + SIGLEC7 chr19 51656320 + Exonic hg19 BLCA TCGA-FJ-A3ZF-01A 5 34 5'UTR-CDS Intra-chr q13.41 Transcription factor q13.41 Seq+ 17971 ChimerSeq STARFusion TCGA_RNA-Seq TSTD1-GBAP1 TSTD1 chr1 161008670 - GBAP1 chr1 155187164 - Exonic hg19 BLCA TCGA-FJ-A3ZF-01A 4 21 CDS-3'UTR Intra-chr q23.3 q22 Seq+ 17972 ChimerSeq STARFusion TCGA_RNA-Seq TUBGCP4-TMEM62 TUBGCP4 chr15 43678528 + TMEM62 chr15 43452879 + Exonic hg19 BLCA TCGA-FJ-A3ZF-01A 5 10 In-Frame Intra-chr q15.3 q15.2 Seq+ 17973 ChimerSeq STARFusion TCGA_RNA-Seq TSTD1-GBA TSTD1 chr1 161008670 - GBA chr1 155208441 - Exonic hg19 BLCA TCGA-FJ-A3ZF-01A 4 7 In-Frame Intra-chr q23.3 17974 ChimerSeq STARFusion TCGA_RNA-Seq C3orf67-FAM3D C3orf67 chr3 59025283 - FAM3D chr3 58641328 - Exonic hg19 BLCA TCGA-FJ-A3ZF-01A 2 3 5'UTR-5'UTR Intra-chr p14.2 p14.2 17975 ChimerSeq STARFusion TCGA_RNA-Seq VWDE-PHF14 VWDE chr7 12443285 - PHF14 chr7 11150977 + Exonic hg19 BLCA TCGA-FJ-A3ZF-01A 2 1 CDS-5'UTR Intra-chr p21.3 p21.3 17976 ChimerSeq STARFusion TCGA_RNA-Seq TSKU-SFRP4 TSKU chr11 76494448 + SFRP4 chr7 37954055 - Exonic hg19 BRCA TCGA-A8-A091-01A 12 50 5'UTR-CDS Inter-chr q13.5 p14.1 Tumor suppressor gene Seq+ 17977 ChimerSeq STARFusion TCGA_RNA-Seq TAF4-CDH22 TAF4 chr20 60639507 - CDH22 chr20 44856266 - Exonic hg19 BRCA TCGA-A8-A091-01A 13 32 In-Frame Intra-chr q13.12 Seq+ 17978 ChimerSeq STARFusion TCGA_RNA-Seq OPRD1-EPB41 OPRD1 chr1 29185815 + EPB41 chr1 29313960 + Exonic hg19 BRCA TCGA-A8-A091-01A 9 16 CDS-5'UTR Intra-chr p35.3 p35.3 Tumor suppressor gene 17979 ChimerSeq STARFusion TCGA_RNA-Seq ROCK1-LRIG3 ROCK1 chr18 18625253 - LRIG3 chr12 59308117 - Exonic hg19 BRCA TCGA-A8-A091-01A 2 30 In-Frame Inter-chr q11.1 AGC:DMPK q14.1 Tumor suppressor gene Seq+ 17980 ChimerSeq STARFusion TCGA_RNA-Seq NCOA5-CDH4 NCOA5 chr20 44708026 - CDH4 chr20 60318619 + Exonic hg19 BRCA TCGA-A8-A091-01A 3 16 Out-of-frame Intra-chr q13.12 Tumor suppressor gene q13.33 Tumor suppressor gene Seq+ 17981 ChimerSeq STARFusion TCGA_RNA-Seq C2CD3-ABCA13 C2CD3 chr11 73843889 - ABCA13 chr7 48520633 + Exonic hg19 BRCA TCGA-A8-A091-01A 4 9 Out-of-frame Inter-chr q13.4 p12.3 Seq+ 17982 ChimerSeq STARFusion TCGA_RNA-Seq NCOA5-CDH4 NCOA5 chr20 44718456 - CDH4 chr20 60318619 + Exonic hg19 BRCA TCGA-A8-A091-01A 2 16 5'UTR-5'UTR Intra-chr q13.12 Tumor suppressor gene q13.33 Tumor suppressor gene Seq+ 17983 ChimerSeq STARFusion TCGA_RNA-Seq C11orf30-BBS9 C11orf30 chr11 76207513 + BBS9 chr7 33195250 + Exonic hg19 BRCA TCGA-A8-A091-01A 3 10 Out-of-frame Inter-chr p14.3 Seq+ 17984 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA8-PAK1 PLEKHA8 chr7 30118394 + PAK1 chr11 77103586 - Exonic hg19 BRCA TCGA-A8-A091-01A 3 2 CDS-5'UTR Inter-chr p14.3 q14.1 STE:STE20 17985 ChimerSeq STARFusion TCGA_RNA-Seq PROSC-CHMP1A PROSC chr8 37623873 + CHMP1A chr16 89713739 - Exonic hg19 BRCA TCGA-A8-A091-01A 2 1 In-Frame Inter-chr q24.3 Seq+ 17986 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 BRCA TCGA-EW-A1P8-01A 16 63 In-Frame Intra-chr p13.3 p13.3 17987 ChimerSeq STARFusion TCGA_RNA-Seq CHODL-ANKRD30BP2 CHODL chr21 19289717 + ANKRD30BP2 chr21 14424117 + Exonic hg19 BRCA TCGA-EW-A1P8-01A 5 56 5'UTR-5'UTR Intra-chr q21.1 q11.2 Seq+ 17988 ChimerSeq STARFusion TCGA_RNA-Seq CHODL-ANKRD30BP2 CHODL chr21 19289717 + ANKRD30BP2 chr21 14417484 + Exonic hg19 BRCA TCGA-EW-A1P8-01A 3 36 5'UTR-5'UTR Intra-chr q21.1 q11.2 Seq+ 17989 ChimerSeq STARFusion TCGA_RNA-Seq CHODL-ANKRD30BP2 CHODL chr21 19289717 + ANKRD30BP2 chr21 14414823 + Exonic hg19 BRCA TCGA-EW-A1P8-01A 2 36 5'UTR-5'UTR Intra-chr q21.1 q11.2 Seq+ 17990 ChimerSeq STARFusion TCGA_RNA-Seq GOLPH3L-CHRM3 GOLPH3L chr1 150634290 - CHRM3 chr1 239656009 + Exonic hg19 BRCA TCGA-EW-A1P8-01A 3 6 CDS-5'UTR Intra-chr q21.3 q43 Seq+ 17991 ChimerSeq STARFusion TCGA_RNA-Seq TENM4-INTS4 TENM4 chr11 78600830 - INTS4 chr11 77594998 - Exonic hg19 BRCA TCGA-BH-A0HY-01A 71 370 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 17992 ChimerSeq STARFusion TCGA_RNA-Seq ITPK1-ACO1 ITPK1 chr14 93581414 - ACO1 chr9 32405483 + Exonic hg19 BRCA TCGA-BH-A0HY-01A 33 121 CDS-5'UTR Inter-chr p21.1 Seq+ 17993 ChimerSeq STARFusion TCGA_RNA-Seq GAB2-TENM4 GAB2 chr11 78128692 - TENM4 chr11 78781054 - Exonic hg19 BRCA TCGA-BH-A0HY-01A 41 83 Out-of-frame Intra-chr q14.1 q14.1 17994 ChimerSeq STARFusion TCGA_RNA-Seq SREBF2-ACO2 SREBF2 chr22 42229362 + ACO2 chr22 41916175 + Exonic hg19 BRCA TCGA-BH-A0HY-01A 17 97 CDS-5'UTR Intra-chr q13.2 Transcription factor q13.2 Seq+ 17995 ChimerSeq STARFusion TCGA_RNA-Seq SREBF2-ACO2 SREBF2 chr22 42229362 + ACO2 chr22 41918834 + Exonic hg19 BRCA TCGA-BH-A0HY-01A 14 97 CDS-5'UTR Intra-chr q13.2 Transcription factor q13.2 Seq+ 17996 ChimerSeq STARFusion TCGA_RNA-Seq C17orf102-RARRES3 C17orf102 chr17 32906098 - RARRES3 chr11 63306988 + Exonic hg19 BRCA TCGA-BH-A0HY-01A 14 32 Out-of-frame Inter-chr q12 q12.3 Tumor suppressor gene Seq+ 17997 ChimerSeq STARFusion TCGA_RNA-Seq CMSS1-XRRA1 CMSS1 chr3 99536887 + XRRA1 chr11 74618318 - Exonic hg19 BRCA TCGA-BH-A0HY-01A 6 17 Out-of-frame Inter-chr q12.1 q13.4 Seq+ 17998 ChimerSeq STARFusion TCGA_RNA-Seq MAP4K5-NIN MAP4K5 chr14 50971518 - NIN chr14 51205004 - Exonic hg19 BRCA TCGA-BH-A0HY-01A 3 15 Out-of-frame Intra-chr q22.1 q22.1 Oncogene Seq+ 17999 ChimerSeq STARFusion TCGA_RNA-Seq STIP1-P2RY6 STIP1 chr11 63971094 + P2RY6 chr11 73007530 + Exonic hg19 BRCA TCGA-BH-A0HY-01A 2 12 CDS-5'UTR Intra-chr q13.1 q13.4 Seq+ 18000 ChimerSeq STARFusion TCGA_RNA-Seq LINC00340-CDKAL1 LINC00340 chr6 21802971 + CDKAL1 chr6 20535582 + Exonic hg19 BRCA TCGA-BH-A0HY-01A 2 4 5'UTR-5'UTR Intra-chr p22.3 18001 ChimerSeq STARFusion TCGA_RNA-Seq EFHC1-LPHN3 EFHC1 chr6 52288965 + LPHN3 chr4 62362839 + Exonic hg19 BRCA TCGA-BH-A0HY-01A 2 3 5'UTR-5'UTR Inter-chr p12.2 Seq+ 18002 ChimerSeq STARFusion TCGA_RNA-Seq COL5A2-FIBP COL5A2 chr2 190044234 - FIBP chr11 65653893 - Exonic hg19 BRCA TCGA-BH-A0HY-01A 2 1 Out-of-frame Inter-chr q32.2 q13.1 18003 ChimerSeq STARFusion TCGA_RNA-Seq CPED1-BCO2 CPED1 chr7 120911484 + BCO2 chr11 112084447 + Exonic hg19 BRCA TCGA-B6-A401-01A 2 1 Out-of-frame Inter-chr q31.31 q23.1 Seq+ 18004 ChimerSeq STARFusion TCGA_RNA-Seq SERHL2-RRP7A SERHL2 chr22 42968458 + RRP7A chr22 42905116 - Exonic hg19 BRCA TCGA-GM-A2DD-01A 5 29 Out-of-frame Intra-chr q13.2 q13.2 18005 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-C19orf26 SBNO2 chr19 1147308 - C19orf26 chr19 1233635 - Exonic hg19 BRCA TCGA-GM-A2DD-01A 5 9 In-Frame Intra-chr p13.3 Seq+ 18006 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D5-TOP2B TBC1D5 chr3 17783973 - TOP2B chr3 25642716 - Exonic hg19 BRCA TCGA-GM-A2DD-01A 4 10 5'UTR-CDS Intra-chr p24.3 p24.2 Seq+ 18007 ChimerSeq STARFusion TCGA_RNA-Seq ZKSCAN1-CCDC136 ZKSCAN1 chr7 99613349 + CCDC136 chr7 128444704 + Exonic hg19 BRCA TCGA-GM-A2DD-01A 4 9 5'UTR-CDS Intra-chr q22.1 Transcription factor q32.1 Tumor suppressor gene Seq+ 18008 ChimerSeq STARFusion TCGA_RNA-Seq SAR1A-LRRC20 SAR1A chr10 71930169 - LRRC20 chr10 72100458 - Exonic hg19 BRCA TCGA-GM-A2DD-01A 3 2 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 18009 ChimerSeq STARFusion TCGA_RNA-Seq DUSP16-HEBP1 DUSP16 chr12 12715051 - HEBP1 chr12 13142349 - Exonic hg19 BRCA TCGA-GM-A2DD-01A 2 5 5'UTR-CDS Intra-chr p13.1 Seq+ 18010 ChimerSeq STARFusion TCGA_RNA-Seq MARK3-SLC25A21 MARK3 chr14 103941547 + SLC25A21 chr14 37344209 - Exonic hg19 BRCA TCGA-GM-A2DD-01A 2 3 Out-of-frame Intra-chr q32.32 CAMK:CAMKL q13.3 Seq+ 18011 ChimerSeq STARFusion TCGA_RNA-Seq SASH1-ARID1B SASH1 chr6 148711398 + ARID1B chr6 157256600 + Exonic hg19 BRCA TCGA-E9-A1NF-01A 9 37 In-Frame Intra-chr q24.3 Tumor suppressor gene q25.3 Oncogene Seq+ 18012 ChimerSeq STARFusion TCGA_RNA-Seq IGF1R-PPP4R1 IGF1R chr15 99467913 + PPP4R1 chr18 9595151 - Exonic hg19 BRCA TCGA-E9-A1NF-01A 3 49 In-Frame Inter-chr q26.3 TK:InsR Oncogene p11.22 Seq+ 18013 ChimerSeq STARFusion TCGA_RNA-Seq IGF1R-ARID1B IGF1R chr15 99251336 + ARID1B chr6 157469758 + Exonic hg19 BRCA TCGA-E9-A1NF-01A 4 13 In-Frame Inter-chr q26.3 TK:InsR Oncogene q25.3 Oncogene Seq+ 18014 ChimerSeq STARFusion TCGA_RNA-Seq VRK2-FANCL VRK2 chr2 58316858 + FANCL chr2 58393009 - Exonic hg19 BRCA TCGA-E9-A1NF-01A 4 11 In-Frame Intra-chr p16.1 CK1:VRK p16.1 Seq+ 18015 ChimerSeq STARFusion TCGA_RNA-Seq MFGE8-IGF1R MFGE8 chr15 89448988 - IGF1R chr15 99434554 + Exonic hg19 BRCA TCGA-E9-A1NF-01A 4 8 In-Frame Intra-chr q26.1 q26.3 TK:InsR Oncogene Seq+ 18016 ChimerSeq STARFusion TCGA_RNA-Seq NUP50-CDK5RAP1 NUP50 chr22 45571961 + CDK5RAP1 chr20 31946929 - Exonic hg19 BRCA TCGA-E9-A1NF-01A 2 4 Out-of-frame Inter-chr q13.31 q11.21 Seq+ 18017 ChimerSeq STARFusion TCGA_RNA-Seq SYTL2-TMEM135 SYTL2 chr11 85468668 - TMEM135 chr11 87006824 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 19 71 In-Frame Intra-chr q14.1 q14.2 Seq+ 18018 ChimerSeq STARFusion TCGA_RNA-Seq DYRK1A-MRPS6 DYRK1A chr21 38858916 + MRPS6 chr21 35497641 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 17 61 Out-of-frame Intra-chr q22.13 CMGC:DYRK q22.11 Seq+ 18019 ChimerSeq STARFusion TCGA_RNA-Seq GTF2B-CCBL2 GTF2B chr1 89352944 - CCBL2 chr1 89401928 - Exonic hg19 BRCA TCGA-BH-A1FD-01A 13 73 Out-of-frame Intra-chr p22.2 Transcription factor Seq+ 18020 ChimerSeq STARFusion TCGA_RNA-Seq CDK7-CCNB1 CDK7 chr5 68531280 + CCNB1 chr5 68463735 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 7 55 In-Frame Intra-chr CMGC:CDK q13.2 Seq+ 18021 ChimerSeq STARFusion TCGA_RNA-Seq MKNK2-ZFR2 MKNK2 chr19 2046366 - ZFR2 chr19 3852612 - Exonic hg19 BRCA TCGA-BH-A1FD-01A 15 23 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 18022 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1-TACC3 WHSC1 chr4 1906105 + TACC3 chr4 1742553 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 10 38 In-Frame Intra-chr Oncogene p16.3 Seq+ 18023 ChimerSeq STARFusion TCGA_RNA-Seq MCPH1-COLEC10 MCPH1 chr8 6272404 + COLEC10 chr8 120101919 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 8 45 Out-of-frame Intra-chr p23.1 Tumor suppressor gene q24.12 Seq+ 18024 ChimerSeq STARFusion TCGA_RNA-Seq SYTL2-TMEM135 SYTL2 chr11 85521997 - TMEM135 chr11 87006824 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 2 68 5'UTR-5'UTR Intra-chr q14.1 q14.2 Seq+ 18025 ChimerSeq STARFusion TCGA_RNA-Seq TRPS1-LINC00536 TRPS1 chr8 116599228 - LINC00536 chr8 117142505 - Exonic hg19 BRCA TCGA-BH-A1FD-01A 9 23 CDS-3'UTR Intra-chr q23.3 Transcription factor q23.3 Seq+ 18026 ChimerSeq STARFusion TCGA_RNA-Seq SUSD4-RYR2 SUSD4 chr1 223536620 - RYR2 chr1 237664011 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 9 22 CDS-5'UTR Intra-chr q41 q43 Seq+ 18027 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-CCDC170 ESR1 chr6 152163922 + CCDC170 chr6 151936578 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 6 31 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 KB Pub Seq+ 18028 ChimerSeq STARFusion TCGA_RNA-Seq GOLGA7-PVT1 GOLGA7 chr8 41348484 + PVT1 chr8 129001408 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 10 12 CDS-5'UTR Intra-chr p11.21 q24.21 Seq+ 18029 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-AKAP12 ESR1 chr6 152265643 + AKAP12 chr6 151669846 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 8 18 In-Frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 Tumor suppressor gene 18030 ChimerSeq STARFusion TCGA_RNA-Seq RNF19A-HRSP12 RNF19A chr8 101325519 - HRSP12 chr8 99120979 - Exonic hg19 BRCA TCGA-BH-A1FD-01A 8 12 5'UTR-CDS Intra-chr q22.2 Seq+ 18031 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-CCDC170 ESR1 chr6 151977898 + CCDC170 chr6 151907024 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 2 31 5'UTR-CDS Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 KB Pub Seq+ 18032 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-AKAP12 ESR1 chr6 152201906 + AKAP12 chr6 151626882 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 5 18 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 Tumor suppressor gene 18033 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-POLH ESR1 chr6 152332929 + POLH chr6 43550053 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 4 20 CDS-5'UTR Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor p21.1 Seq+ 18034 ChimerSeq STARFusion TCGA_RNA-Seq NCSTN-ATP1A4 NCSTN chr1 160314616 + ATP1A4 chr1 160145882 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 5 16 In-Frame Intra-chr q23.2 q23.2 Seq+ 18035 ChimerSeq STARFusion TCGA_RNA-Seq SUSD4-RYR2 SUSD4 chr1 223536620 - RYR2 chr1 237666589 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 3 22 CDS-5'UTR Intra-chr q41 q43 Seq+ 18036 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-KHDRBS3 PVT1 chr8 128903244 + KHDRBS3 chr8 136659236 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 2 24 5'UTR-CDS Intra-chr q24.21 q24.23 Seq+ 18037 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-KHDRBS3 PVT1 chr8 128951922 + KHDRBS3 chr8 136657302 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 2 24 5'UTR-CDS Intra-chr q24.21 q24.23 Seq+ 18038 ChimerSeq STARFusion TCGA_RNA-Seq TRPS1-LINC00536 TRPS1 chr8 116599228 - LINC00536 chr8 116989661 - Exonic hg19 BRCA TCGA-BH-A1FD-01A 2 23 CDS-3'UTR Intra-chr q23.3 Transcription factor q23.3 Seq+ 18039 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-EFR3A VPS13B chr8 100205285 + EFR3A chr8 132952746 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 3 16 In-Frame Intra-chr q22.2 q24.22 Seq+ 18040 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2IP-PPWD1 ERBB2IP chr5 65222634 + PPWD1 chr5 64872706 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 4 10 5'UTR-5'UTR Intra-chr q12.3 Seq+ 18041 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-LINC00977 PTK2 chr8 141840571 - LINC00977 chr8 130235615 - Exonic hg19 BRCA TCGA-BH-A1FD-01A 4 8 Out-of-frame Intra-chr q24.3 q24.21 18042 ChimerSeq STARFusion TCGA_RNA-Seq UTRN-PARK2 UTRN chr6 145051622 + PARK2 chr6 162683797 - Exonic hg19 BRCA TCGA-BH-A1FD-01A 4 6 Out-of-frame Intra-chr q24.2 Tumor suppressor gene Seq+ 18043 ChimerSeq STARFusion TCGA_RNA-Seq ZNF542-NLRP8 ZNF542 chr19 56884992 + NLRP8 chr19 56490760 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 2 13 5'UTR-CDS Intra-chr q13.43 18044 ChimerSeq STARFusion TCGA_RNA-Seq COLGALT1-MVB12A COLGALT1 chr19 17671274 + MVB12A chr19 17531122 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 2 12 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 18045 ChimerSeq STARFusion TCGA_RNA-Seq ALDOA-ASPHD1 ALDOA chr16 30078982 + ASPHD1 chr16 29930852 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 2 10 CDS-3'UTR Intra-chr p11.2 p11.2 Seq+ 18046 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2IP-PPWD1 ERBB2IP chr5 65222634 + PPWD1 chr5 64863340 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 2 10 5'UTR-5'UTR Intra-chr q12.3 Seq+ 18047 ChimerSeq STARFusion TCGA_RNA-Seq PANK1-C8orf34 PANK1 chr10 91403454 - C8orf34 chr8 69621229 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 2 8 Out-of-frame Inter-chr q23.31 q13.2 Seq+ 18048 ChimerSeq STARFusion TCGA_RNA-Seq CD83-LAMA2 CD83 chr6 14118296 + LAMA2 chr6 129663488 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 2 7 In-Frame Intra-chr p23 q22.33 Seq+ 18049 ChimerSeq STARFusion TCGA_RNA-Seq OPRD1-EPB41 OPRD1 chr1 29185815 + EPB41 chr1 29313960 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 2 7 CDS-5'UTR Intra-chr p35.3 p35.3 Tumor suppressor gene 18050 ChimerSeq STARFusion TCGA_RNA-Seq GNAQ-C9orf64 GNAQ chr9 80409379 - C9orf64 chr9 86559904 - Exonic hg19 BRCA TCGA-E2-A159-01A 28 52 In-Frame Intra-chr q21.2 Oncogene q21.32 Seq+ 18051 ChimerSeq STARFusion TCGA_RNA-Seq KLF9-ACTL7B KLF9 chr9 73000464 - ACTL7B chr9 111617168 - Exonic hg19 BRCA TCGA-E2-A159-01A 8 24 Out-of-frame Intra-chr q21.12 Transcription factor q31.3 Seq+ 18052 ChimerSeq STARFusion TCGA_RNA-Seq DPH7-PPP2R4 DPH7 chr9 140468660 - PPP2R4 chr9 131885331 + Exonic hg19 BRCA TCGA-E2-A159-01A 7 17 Out-of-frame Intra-chr q34.3 Tumor suppressor gene 18053 ChimerSeq STARFusion TCGA_RNA-Seq PKP1-OR6K4P PKP1 chr1 201263173 + OR6K4P chr1 158694905 - Exonic hg19 BRCA TCGA-E2-A159-01A 3 22 Out-of-frame Intra-chr q32.1 q23.1 18054 ChimerSeq STARFusion TCGA_RNA-Seq DPH7-PPP2R4 DPH7 chr9 140470532 - PPP2R4 chr9 131885331 + Exonic hg19 BRCA TCGA-E2-A159-01A 2 17 Out-of-frame Intra-chr q34.3 Tumor suppressor gene 18055 ChimerSeq STARFusion TCGA_RNA-Seq KIF1B-MYO5B KIF1B chr1 10328321 + MYO5B chr18 47527781 - Exonic hg19 BRCA TCGA-E2-A159-01A 2 11 Out-of-frame Inter-chr p36.22 Tumor suppressor gene q21.1 Seq+ 18056 ChimerSeq STARFusion TCGA_RNA-Seq EHBP1-BCL11A EHBP1 chr2 63101667 + BCL11A chr2 60679801 - Exonic hg19 BRCA TCGA-D8-A147-01A 22 47 In-Frame Intra-chr p15 p16.1 Oncogene Transcription factor Seq+ 18057 ChimerSeq STARFusion TCGA_RNA-Seq C16orf52-LINC00839 C16orf52 chr16 22019728 + LINC00839 chr10 42982427 + Exonic hg19 BRCA TCGA-D8-A147-01A 11 65 Out-of-frame Inter-chr q11.21 18058 ChimerSeq STARFusion TCGA_RNA-Seq HMBS-EHBP1 HMBS chr11 118963521 + EHBP1 chr2 63053222 + Exonic hg19 BRCA TCGA-D8-A147-01A 9 45 In-Frame Inter-chr p15 Seq+ 18059 ChimerSeq STARFusion TCGA_RNA-Seq VASP-CYP2S1 VASP chr19 46011034 + CYP2S1 chr19 41711863 + Exonic hg19 BRCA TCGA-D8-A147-01A 9 34 Out-of-frame Intra-chr q13.32 q13.2 Seq+ 18060 ChimerSeq STARFusion TCGA_RNA-Seq HMBS-EHBP1 HMBS chr11 118963731 + EHBP1 chr2 63053222 + Exonic hg19 BRCA TCGA-D8-A147-01A 3 45 In-Frame Inter-chr p15 Seq+ 18061 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D20-C20orf96 TBC1D20 chr20 442980 - C20orf96 chr20 264722 - Exonic hg19 BRCA TCGA-D8-A147-01A 5 20 In-Frame Intra-chr p13 p13 Seq+ 18062 ChimerSeq STARFusion TCGA_RNA-Seq ZNF292-B3GAT2 ZNF292 chr6 87865477 + B3GAT2 chr6 71603975 - Exonic hg19 BRCA TCGA-D8-A147-01A 5 18 In-Frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q13 Seq+ 18063 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D20-C20orf96 TBC1D20 chr20 442980 - C20orf96 chr20 270317 - Exonic hg19 BRCA TCGA-D8-A147-01A 3 20 Out-of-frame Intra-chr p13 p13 Seq+ 18064 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D20-C20orf96 TBC1D20 chr20 442980 - C20orf96 chr20 270948 - Exonic hg19 BRCA TCGA-D8-A147-01A 3 20 Out-of-frame Intra-chr p13 p13 Seq+ 18065 ChimerSeq STARFusion TCGA_RNA-Seq SOBP-ABCA9 SOBP chr6 107854814 + ABCA9 chr17 67008224 - Exonic hg19 BRCA TCGA-D8-A147-01A 2 10 In-Frame Inter-chr q21 q24.2 Seq+ 18066 ChimerSeq STARFusion TCGA_RNA-Seq GUK1-TMEM216 GUK1 chr1 228334639 + TMEM216 chr11 61160703 + Exonic hg19 BRCA TCGA-D8-A147-01A 2 3 Out-of-frame Inter-chr q42.13 q12.2 Seq+ 18067 ChimerSeq STARFusion TCGA_RNA-Seq MCM9-CEP85L MCM9 chr6 119147310 - CEP85L chr6 118973971 - Exonic hg19 BRCA TCGA-D8-A147-01A 2 2 CDS-5'UTR Intra-chr q22.31 Tumor suppressor gene q22.31 18068 ChimerSeq STARFusion TCGA_RNA-Seq EFHD1-EIF4E2 EFHD1 chr2 233537153 + EIF4E2 chr2 233431539 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 169 398 In-Frame Intra-chr q37.1 q37.1 Seq+ 18069 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHF2-NDUFAF6 PLEKHF2 chr8 96146258 + NDUFAF6 chr8 96044223 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 113 463 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 18070 ChimerSeq STARFusion TCGA_RNA-Seq EPS15L1-CLNS1A EPS15L1 chr19 16552703 - CLNS1A chr11 77330740 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 34 80 Out-of-frame Inter-chr p13.11 q14.1 Seq+ 18071 ChimerSeq STARFusion TCGA_RNA-Seq RPRD2-SHC1 RPRD2 chr1 150337395 + SHC1 chr1 154938993 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 33 62 Out-of-frame Intra-chr q21.2 q21.3 Seq+ 18072 ChimerSeq STARFusion TCGA_RNA-Seq ZNF717-TMEM254 ZNF717 chr3 75832457 - TMEM254 chr10 81841597 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 22 61 Out-of-frame Inter-chr p12.3 Transcription factor q22.3 Seq+ 18073 ChimerSeq STARFusion TCGA_RNA-Seq KAT6B-ADK KAT6B chr10 76603236 + ADK chr10 76429941 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 15 78 Out-of-frame Intra-chr Oncogene q22.2 Seq+ 18074 ChimerSeq STARFusion TCGA_RNA-Seq ACTR3B-PTPRN2 ACTR3B chr7 152522207 + PTPRN2 chr7 157388007 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 16 29 In-Frame Intra-chr q36.1 q36.3 Seq+ 18075 ChimerSeq STARFusion TCGA_RNA-Seq RAD9A-KDM2A RAD9A chr11 67161261 + KDM2A chr11 67024955 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 10 43 CDS-5'UTR Intra-chr q13.2 q13.2 Transcription factor Seq+ 18076 ChimerSeq STARFusion TCGA_RNA-Seq BCR-MRVI1 BCR chr22 23524426 + MRVI1 chr11 10673729 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 10 42 In-Frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene p15.4 Tumor suppressor gene Seq+ 18077 ChimerSeq STARFusion TCGA_RNA-Seq SYT12-C11orf80 SYT12 chr11 66802309 + C11orf80 chr11 66605841 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 8 45 In-Frame Intra-chr q13.2 q13.2 Seq+ 18078 ChimerSeq STARFusion TCGA_RNA-Seq MAU2-OR4C7P MAU2 chr19 19458172 + OR4C7P chr11 51483298 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 6 47 Out-of-frame Inter-chr p13.11 q11 18079 ChimerSeq STARFusion TCGA_RNA-Seq RAB38-CA10 RAB38 chr11 87908351 - CA10 chr17 50149753 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 7 38 In-Frame Inter-chr q14.2 q22 Seq+ 18080 ChimerSeq STARFusion TCGA_RNA-Seq SYT12-C11orf80 SYT12 chr11 66802309 + C11orf80 chr11 66605838 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 6 41 In-Frame Intra-chr q13.2 q13.2 Seq+ 18081 ChimerSeq STARFusion TCGA_RNA-Seq RNF169-CBX1 RNF169 chr11 74528759 + CBX1 chr17 46154403 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 5 31 CDS-5'UTR Inter-chr q13.4 q21.32 Seq+ 18082 ChimerSeq STARFusion TCGA_RNA-Seq BCR-MRVI1 BCR chr22 23524426 + MRVI1 chr11 10651258 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 2 41 In-Frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene p15.4 Tumor suppressor gene Seq+ 18083 ChimerSeq STARFusion TCGA_RNA-Seq CKS1B-SHC1 CKS1B chr1 154947280 + SHC1 chr1 154938993 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 8 17 In-Frame Intra-chr q21.3 Oncogene q21.3 Seq+ 18084 ChimerSeq STARFusion TCGA_RNA-Seq USP39-DNAH6 USP39 chr2 85858069 + DNAH6 chr2 84945328 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 11 5 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 18085 ChimerSeq STARFusion TCGA_RNA-Seq TAPBP-DAXX TAPBP chr6 33271732 - DAXX chr6 33291807 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 7 20 CDS-5'UTR Intra-chr Oncogene Seq+ 18086 ChimerSeq STARFusion TCGA_RNA-Seq C8orf87-TRIQK C8orf87 chr8 94178960 - TRIQK chr8 93966792 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 2 32 CDS-5'UTR Intra-chr q22.1 q22.1 18087 ChimerSeq STARFusion TCGA_RNA-Seq PNCK-HCFC1 PNCK chrX 152952886 - HCFC1 chrX 153230177 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 2 27 5'UTR-CDS Intra-chr q28 q28 Seq+ 18088 ChimerSeq STARFusion TCGA_RNA-Seq RNF169-CBX1 RNF169 chr11 74528759 + CBX1 chr17 46153540 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 2 27 In-Frame Inter-chr q13.4 q21.32 Seq+ 18089 ChimerSeq STARFusion TCGA_RNA-Seq SYT12-RCE1 SYT12 chr11 66802309 + RCE1 chr11 66605841 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 4 18 CDS-5'UTR Intra-chr q13.2 q13.2 18090 ChimerSeq STARFusion TCGA_RNA-Seq RAB3GAP1-ACMSD RAB3GAP1 chr2 135893502 + ACMSD chr2 135616831 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 4 14 In-Frame Intra-chr q21.3 q21.3 Seq+ 18091 ChimerSeq STARFusion TCGA_RNA-Seq CORO1B-ERBB2 CORO1B chr11 67207589 - ERBB2 chr17 37868181 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 5 8 Out-of-frame Inter-chr q13.2 q12 Oncogene Seq+ 18092 ChimerSeq STARFusion TCGA_RNA-Seq SHC1-RPRD2 SHC1 chr1 154946724 - RPRD2 chr1 150390072 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 3 16 5'UTR-CDS Intra-chr q21.3 q21.2 Seq+ 18093 ChimerSeq STARFusion TCGA_RNA-Seq TAPBP-DAXX TAPBP chr6 33271905 - DAXX chr6 33291807 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 2 20 CDS-5'UTR Intra-chr Oncogene Seq+ 18094 ChimerSeq STARFusion TCGA_RNA-Seq ACOT7-KLHL21 ACOT7 chr1 6378552 - KLHL21 chr1 6655617 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 4 8 Out-of-frame Intra-chr p36.31 p36.31 Seq+ 18095 ChimerSeq STARFusion TCGA_RNA-Seq MCM9-FAM184A MCM9 chr6 119215191 - FAM184A chr6 119338109 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 4 8 3'UTR-CDS Intra-chr q22.31 Tumor suppressor gene q22.31 Seq+ 18096 ChimerSeq STARFusion TCGA_RNA-Seq APPL1-SPATA12 APPL1 chr3 57287766 + SPATA12 chr3 57107394 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 3 11 CDS-5'UTR Intra-chr p14.3 p14.3 Seq+ 18097 ChimerSeq STARFusion TCGA_RNA-Seq CYP4Z2P-TRABD2B CYP4Z2P chr1 47364515 - TRABD2B chr1 48267291 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 4 6 Out-of-frame Intra-chr p33 p33 Seq+ 18098 ChimerSeq STARFusion TCGA_RNA-Seq GALNT18-PPP1R1B GALNT18 chr11 11642906 - PPP1R1B chr17 37785423 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 3 7 Out-of-frame Inter-chr p15.4 q12 Tumor suppressor gene Seq+ 18099 ChimerSeq STARFusion TCGA_RNA-Seq NDUFA10-MYEOV2 NDUFA10 chr2 240944627 - MYEOV2 chr2 241073422 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 2 9 Out-of-frame Intra-chr 18100 ChimerSeq STARFusion TCGA_RNA-Seq MCM9-FAM184A MCM9 chr6 119232815 - FAM184A chr6 119338109 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 2 8 Out-of-frame Intra-chr q22.31 Tumor suppressor gene q22.31 Seq+ 18101 ChimerSeq STARFusion TCGA_RNA-Seq TOX3-CASC16 TOX3 chr16 52502421 - CASC16 chr16 52682024 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 2 8 Out-of-frame Intra-chr q12.1 q12.2 Seq+ 18102 ChimerSeq STARFusion TCGA_RNA-Seq CACNA1A-LINC00905 CACNA1A chr19 13470420 - LINC00905 chr19 16145295 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 2 7 Out-of-frame Intra-chr p13.13 p13.12 18103 ChimerSeq STARFusion TCGA_RNA-Seq MAP7-ECHDC1 MAP7 chr6 136871480 - ECHDC1 chr6 127611422 - Exonic hg19 BRCA TCGA-A2-A04V-01A 19 36 Out-of-frame Intra-chr q23.3 q22.33 Seq+ 18104 ChimerSeq STARFusion TCGA_RNA-Seq ILF3-C3 ILF3 chr19 10765163 + C3 chr19 6697805 - Exonic hg19 BRCA TCGA-A2-A0YJ-01A 15 36 5'UTR-CDS Intra-chr p13.2 p13.3 Seq+ 18105 ChimerSeq STARFusion TCGA_RNA-Seq TFEB-LASP1 TFEB chr6 41703088 - LASP1 chr17 37034339 + Exonic hg19 BRCA TCGA-A2-A0YJ-01A 5 10 5'UTR-CDS Inter-chr p21.1 Transcription factor q12 Seq+ 18106 ChimerSeq STARFusion TCGA_RNA-Seq CTSB-DAP3 CTSB chr8 11710141 - DAP3 chr1 155659010 + Exonic hg19 BRCA TCGA-A2-A0YJ-01A 3 1 Out-of-frame Inter-chr p23.1 q22 18107 ChimerSeq STARFusion TCGA_RNA-Seq USP25-CALM2 USP25 chr21 17138460 + CALM2 chr2 47397903 - Exonic hg19 BRCA TCGA-A2-A0YJ-01A 2 2 Out-of-frame Inter-chr q21.1 p21 18108 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0930-ANK3 KIAA0930 chr22 45636521 - ANK3 chr10 61898845 - Exonic hg19 BRCA TCGA-EW-A1OZ-01A 11 19 In-Frame Inter-chr q13.31 q21.2 Seq+ 18109 ChimerSeq STARFusion TCGA_RNA-Seq GABARAP-MYOCD GABARAP chr17 7144661 - MYOCD chr17 12639478 + Exonic hg19 BRCA TCGA-EW-A1OZ-01A 7 14 Out-of-frame Intra-chr p13.1 Tumor suppressor gene p12 Seq+ 18110 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-LPP SEPT9 chr17 75303279 + LPP chr3 188202380 + Exonic hg19 BRCA TCGA-EW-A1OZ-01A 3 9 In-Frame Inter-chr q27.3 Oncogene Seq+ 18111 ChimerSeq STARFusion TCGA_RNA-Seq LYRM9-NSRP1 LYRM9 chr17 26209595 - NSRP1 chr17 28499560 + Exonic hg19 BRCA TCGA-EW-A1OZ-01A 2 8 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 18112 ChimerSeq STARFusion TCGA_RNA-Seq SAR1A-CDK12 SAR1A chr10 71917520 - CDK12 chr17 37646810 + Exonic hg19 BRCA TCGA-EW-A1OZ-01A 2 5 Out-of-frame Inter-chr q22.1 q12 Oncogene Seq+ 18113 ChimerSeq STARFusion TCGA_RNA-Seq VPS53-NSFP1 VPS53 chr17 436082 - NSFP1 chr17 44701610 + Exonic hg19 BRCA TCGA-EW-A1OZ-01A 2 1 CDS-5'UTR Intra-chr Tumor suppressor gene 18114 ChimerSeq STARFusion TCGA_RNA-Seq PIGP-TTC23 PIGP chr21 38439562 - TTC23 chr15 99785715 - Exonic hg19 BRCA TCGA-A8-A07J-01A 4 0 CDS-5'UTR Inter-chr q22.13 q26.3 18115 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 BRCA TCGA-A8-A07J-01A 2 0 In-Frame Intra-chr p11.21 p11.21 18116 ChimerSeq STARFusion TCGA_RNA-Seq NPM1-RAB4A NPM1 chr5 170815010 + RAB4A chr1 229422233 + Exonic hg19 BRCA TCGA-D8-A1JL-01A 35 421 In-Frame Inter-chr q35.1 Oncogene Tumor suppressor gene q42.13 Seq+ 18117 ChimerSeq STARFusion TCGA_RNA-Seq CHD7-CCDC58 CHD7 chr8 61743136 + CCDC58 chr3 122081874 - Exonic hg19 BRCA TCGA-D8-A1JL-01A 46 279 Out-of-frame Inter-chr q12.2 q21.1 Seq+ 18118 ChimerSeq STARFusion TCGA_RNA-Seq NPM1-RAB4A NPM1 chr5 170815010 + RAB4A chr1 229431595 + Exonic hg19 BRCA TCGA-D8-A1JL-01A 9 421 Out-of-frame Inter-chr q35.1 Oncogene Tumor suppressor gene q42.13 Seq+ 18119 ChimerSeq STARFusion TCGA_RNA-Seq HIF1A-MNAT1 HIF1A chr14 62162557 + MNAT1 chr14 61262935 + Exonic hg19 BRCA TCGA-D8-A1JL-01A 28 101 In-Frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 Seq+ 18120 ChimerSeq STARFusion TCGA_RNA-Seq HSPA9-ARL15 HSPA9 chr5 137903144 - ARL15 chr5 53182543 - Exonic hg19 BRCA TCGA-D8-A1JL-01A 13 96 Out-of-frame Intra-chr q31.2 q11.2 Seq+ 18121 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-P2RY11 DNM2 chr19 10913034 + P2RY11 chr19 10224309 + Exonic hg19 BRCA TCGA-D8-A1JL-01A 10 63 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 18122 ChimerSeq STARFusion TCGA_RNA-Seq ZNF292-SMIM8 ZNF292 chr6 87865477 + SMIM8 chr6 88046727 + Exonic hg19 BRCA TCGA-D8-A1JL-01A 9 58 Out-of-frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q15 18123 ChimerSeq STARFusion TCGA_RNA-Seq GOLPH3-LINC00336 GOLPH3 chr5 32173916 - LINC00336 chr6 33554209 - Exonic hg19 BRCA TCGA-D8-A1JL-01A 11 30 CDS-3'UTR Inter-chr p13.3 p21.31 18124 ChimerSeq STARFusion TCGA_RNA-Seq CEP70-STAG1 CEP70 chr3 138289160 - STAG1 chr3 136287703 - Exonic hg19 BRCA TCGA-D8-A1JL-01A 6 29 In-Frame Intra-chr q22.3 q22.3 Seq+ 18125 ChimerSeq STARFusion TCGA_RNA-Seq CYB5RL-TTC39A CYB5RL chr1 54656411 - TTC39A chr1 51756297 - Exonic hg19 BRCA TCGA-D8-A1JL-01A 3 37 Out-of-frame Intra-chr p32.3 p32.3 Seq+ 18126 ChimerSeq STARFusion TCGA_RNA-Seq DIP2C-YY1 DIP2C chr10 735434 - YY1 chr14 100728641 + Exonic hg19 BRCA TCGA-D8-A1JL-01A 9 9 In-Frame Inter-chr p15.3 q32.2 Transcription factor Seq+ 18127 ChimerSeq STARFusion TCGA_RNA-Seq PSMD11-PITPNC1 PSMD11 chr17 30781637 + PITPNC1 chr17 65665624 + Exonic hg19 BRCA TCGA-D8-A1JL-01A 5 15 In-Frame Intra-chr q11.2 q24.2 Seq+ 18128 ChimerSeq STARFusion TCGA_RNA-Seq PHF16-CXorf31 PHF16 chrX 46772154 + CXorf31 chrX 46754016 - Exonic hg19 BRCA TCGA-D8-A1JL-01A 5 8 5'UTR-3'UTR Intra-chr Seq+ 18129 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0753-PHF23 KIAA0753 chr17 6543957 - PHF23 chr17 7140979 - Exonic hg19 BRCA TCGA-D8-A1JL-01A 5 7 5'UTR-CDS Intra-chr p13.1 p13.1 Seq+ 18130 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80954857 - MRPS28 chr8 80831385 - Exonic hg19 BRCA TCGA-D8-A1JL-01A 3 6 Out-of-frame Intra-chr q21.13 q21.13 18131 ChimerSeq STARFusion TCGA_RNA-Seq GRHL2-NRBP2 GRHL2 chr8 102661727 + NRBP2 chr8 144922401 - Exonic hg19 BRCA TCGA-D8-A1JL-01A 3 5 In-Frame Intra-chr q22.3 Transcription factor q24.3 Other:NRBP Seq+ 18132 ChimerSeq STARFusion TCGA_RNA-Seq NACA-PRIM1 NACA chr12 57119047 - PRIM1 chr12 57128029 - Exonic hg19 BRCA TCGA-D8-A1JL-01A 4 1 5'UTR-CDS Intra-chr q13.3 q13.3 18133 ChimerSeq STARFusion TCGA_RNA-Seq MGP-SERF2 MGP chr12 15034888 - SERF2 chr15 44069650 + Exonic hg19 BRCA TCGA-D8-A1JL-01A 3 2 Out-of-frame Inter-chr p12.3 q15.3 18134 ChimerSeq STARFusion TCGA_RNA-Seq PLCG2-ATMIN PLCG2 chr16 81819787 + ATMIN chr16 81074961 + Exonic hg19 BRCA TCGA-D8-A1JL-01A 3 2 Out-of-frame Intra-chr q23.3 q23.2 Tumor suppressor gene Transcription factor 18135 ChimerSeq STARFusion TCGA_RNA-Seq ANKS1B-IKBIP ANKS1B chr12 99145133 - IKBIP chr12 99028191 - Exonic hg19 BRCA TCGA-D8-A1JL-01A 2 3 Out-of-frame Intra-chr q23.1 q23.1 18136 ChimerSeq STARFusion TCGA_RNA-Seq CLSTN2-PCCB CLSTN2 chr3 139654325 + PCCB chr3 135974698 + Exonic hg19 BRCA TCGA-D8-A1JL-01A 2 0 Out-of-frame Intra-chr q23 q22.3 18137 ChimerSeq STARFusion TCGA_RNA-Seq MND1-TRIM2 MND1 chr4 154265892 + TRIM2 chr4 154249682 + Exonic hg19 BRCA TCGA-D8-A1JL-01A 2 0 In-Frame Intra-chr q31.3 q31.3 Seq+ 18138 ChimerSeq STARFusion TCGA_RNA-Seq RBM12B-CDH17 RBM12B chr8 94753109 - CDH17 chr8 95206933 - Exonic hg19 BRCA TCGA-D8-A1JL-01A 2 0 5'UTR-5'UTR Intra-chr q22.1 q22.1 Tumor suppressor gene 18139 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-TINAGL1 IGHG1 chr14 106134590 - TINAGL1 chr1 32052504 + Exonic hg19 BRCA TCGA-S3-AA15-01A 30 1 Out-of-frame Inter-chr q32.33 p35.2 18140 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB2-IGKC DNAJB2 chr2 220151425 + IGKC chr2 89156807 - Exonic hg19 BRCA TCGA-S3-AA15-01A 20 1 Out-of-frame Intra-chr q35 p11.2 18141 ChimerSeq STARFusion TCGA_RNA-Seq IGLC2-AR IGLC2 chr22 23248961 + AR chrX 66764976 + Exonic hg19 BRCA TCGA-S3-AA15-01A 15 0 Out-of-frame Inter-chr q11.22 q12 Oncogene Tumor suppressor gene Transcription factor 18142 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGHG1 TET3 chr2 74329256 + IGHG1 chr14 106209410 - Exonic hg19 BRCA TCGA-S3-AA15-01A 12 0 Out-of-frame Inter-chr p13.1 Transcription factor q32.33 18143 ChimerSeq STARFusion TCGA_RNA-Seq KMT2A-IGLJ3 KMT2A chr11 118343235 + IGLJ3 chr22 23247171 + Exonic hg19 BRCA TCGA-S3-AA15-01A 11 0 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor q11.22 18144 ChimerSeq STARFusion TCGA_RNA-Seq TIMM23B-LINC00843 TIMM23B chr10 51387763 + LINC00843 chr10 51732772 + Exonic hg19 BRCA TCGA-S3-AA15-01A 6 16 Out-of-frame Intra-chr q11.23 q11.23 18145 ChimerSeq STARFusion TCGA_RNA-Seq TRMT11-TPD52L1 TRMT11 chr6 126307768 + TPD52L1 chr6 125541224 + Exonic hg19 BRCA TCGA-S3-AA15-01A 4 23 Out-of-frame Intra-chr q22.32 q22.31 Seq+ 18146 ChimerSeq STARFusion TCGA_RNA-Seq KMT2A-IGLC7 KMT2A chr11 118343235 + IGLC7 chr22 23247171 + Exonic hg19 BRCA TCGA-S3-AA15-01A 8 0 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor q11.22 18147 ChimerSeq STARFusion TCGA_RNA-Seq PLA2G12AP2-IGLC3 PLA2G12AP2 chr13 39476712 + IGLC3 chr22 23247171 + Exonic hg19 BRCA TCGA-S3-AA15-01A 8 0 Out-of-frame Inter-chr q13.3 q11.22 18148 ChimerSeq STARFusion TCGA_RNA-Seq PLA2G12AP2-IGLJ3 PLA2G12AP2 chr13 39476712 + IGLJ3 chr22 23247171 + Exonic hg19 BRCA TCGA-S3-AA15-01A 8 0 Out-of-frame Inter-chr q13.3 q11.22 18149 ChimerSeq STARFusion TCGA_RNA-Seq CKAP5-VMP1 CKAP5 chr11 46780473 - VMP1 chr17 57842332 + Exonic hg19 BRCA TCGA-AC-A23H-01A 62 114 In-Frame Inter-chr p11.2 q23.1 Seq+ 18150 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-ORMDL3 KANSL1 chr17 44144915 - ORMDL3 chr17 38080478 - Exonic hg19 BRCA TCGA-AC-A23H-01A 44 79 CDS-5'UTR Intra-chr q21.1 Seq+ 18151 ChimerSeq STARFusion TCGA_RNA-Seq KIAA2026-LOC100507412 KIAA2026 chr9 5988345 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-AC-A23H-01A 11 135 CDS-5'UTR Inter-chr p24.1 18152 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-ORMDL3 KANSL1 chr17_ctg5_hap1 723143 + ORMDL3 chr17 38080478 - Exonic hg19 BRCA TCGA-AC-A23H-01A 14 112 3'UTR-5'UTR Inter-chr q21.1 Seq+ 18153 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R4-NUP188 PPP2R4 chr9 131891389 + NUP188 chr9 131730785 + Exonic hg19 BRCA TCGA-AC-A23H-01A 13 49 In-Frame Intra-chr Tumor suppressor gene q34.11 Seq+ 18154 ChimerSeq STARFusion TCGA_RNA-Seq USP32-GPR137 USP32 chr17 58469243 - GPR137 chr11 64053982 + Exonic hg19 BRCA TCGA-AC-A23H-01A 5 27 Out-of-frame Inter-chr q23.2 q13.1 Seq+ 18155 ChimerSeq STARFusion TCGA_RNA-Seq BTBD7-UBR7 BTBD7 chr14 93730131 - UBR7 chr14 93688659 + Exonic hg19 BRCA TCGA-AC-A23H-01A 4 26 Out-of-frame Intra-chr Seq+ 18156 ChimerSeq STARFusion TCGA_RNA-Seq UBR7-BTBD7 UBR7 chr14 93686757 + BTBD7 chr14 93723701 - Exonic hg19 BRCA TCGA-AC-A23H-01A 3 13 In-Frame Intra-chr Seq+ 18157 ChimerSeq STARFusion TCGA_RNA-Seq UBE2I-CACNA1H UBE2I chr16 1359774 + CACNA1H chr16 1267919 + Exonic hg19 BRCA TCGA-AC-A23H-01A 2 6 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 18158 ChimerSeq STARFusion TCGA_RNA-Seq SHANK2-PRKCA SHANK2 chr11 70935743 - PRKCA chr17 64492319 + Exonic hg19 BRCA TCGA-AC-A23H-01A 2 3 5'UTR-CDS Inter-chr q13.4 q24.2 Seq+ 18159 ChimerSeq STARFusion TCGA_RNA-Seq GTF3C4-LMX1B GTF3C4 chr9 135559080 + LMX1B chr9 129453115 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 26 86 In-Frame Intra-chr q34.13 q33.3 Transcription factor Seq+ 18160 ChimerSeq STARFusion TCGA_RNA-Seq BTBD1-MESP1 BTBD1 chr15 83710480 - MESP1 chr15 90293458 - Exonic hg19 BRCA TCGA-BH-A0BP-01A 10 52 Out-of-frame Intra-chr q25.2 q26.1 Transcription factor Seq+ 18161 ChimerSeq STARFusion TCGA_RNA-Seq ALCAM-YIF1B ALCAM chr3 105086325 + YIF1B chr19 38800283 - Exonic hg19 BRCA TCGA-BH-A0BP-01A 9 31 In-Frame Inter-chr q13.11 q13.2 Seq+ 18162 ChimerSeq STARFusion TCGA_RNA-Seq RAMP1-MLPH RAMP1 chr2 238820242 + MLPH chr2 238455249 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 4 29 In-Frame Intra-chr q37.3 q37.3 Seq+ 18163 ChimerSeq STARFusion TCGA_RNA-Seq RAMP1-MLPH RAMP1 chr2 238820374 + MLPH chr2 238455249 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 3 29 In-Frame Intra-chr q37.3 q37.3 Seq+ 18164 ChimerSeq STARFusion TCGA_RNA-Seq SIRT6-CERS4 SIRT6 chr19 4175677 - CERS4 chr19 8315960 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 5 20 CDS-5'UTR Intra-chr p13.3 Tumor suppressor gene p13.2 Seq+ 18165 ChimerSeq STARFusion TCGA_RNA-Seq SIRT6-CERS4 SIRT6 chr19 4175839 - CERS4 chr19 8315960 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 2 20 CDS-5'UTR Intra-chr p13.3 Tumor suppressor gene p13.2 Seq+ 18166 ChimerSeq STARFusion TCGA_RNA-Seq TYK2-SHC2 TYK2 chr19 10468440 - SHC2 chr19 430747 - Exonic hg19 BRCA TCGA-BH-A0BP-01A 3 13 In-Frame Intra-chr p13.2 TK:JakA p13.3 Seq+ 18167 ChimerSeq STARFusion TCGA_RNA-Seq UNC45A-SV2B UNC45A chr15 91486312 + SV2B chr15 91809812 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 5 2 Out-of-frame Intra-chr q26.1 q26.1 Seq+ 18168 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS17-PCDHA1 ADAMTS17 chr15 100871094 - PCDHA1 chr5 140358534 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 4 5 Out-of-frame Inter-chr q26.3 q31.3 18169 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS17-PCDHA10 ADAMTS17 chr15 100871094 - PCDHA10 chr5 140358534 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 4 5 Out-of-frame Inter-chr q26.3 q31.3 18170 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS17-PCDHA11 ADAMTS17 chr15 100871094 - PCDHA11 chr5 140358534 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 4 5 Out-of-frame Inter-chr q26.3 q31.3 18171 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS17-PCDHA12 ADAMTS17 chr15 100871094 - PCDHA12 chr5 140358534 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 4 5 Out-of-frame Inter-chr q26.3 q31.3 18172 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS17-PCDHA13 ADAMTS17 chr15 100871094 - PCDHA13 chr5 140358534 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 4 5 Out-of-frame Inter-chr q26.3 q31.3 Seq+ 18173 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS17-PCDHA2 ADAMTS17 chr15 100871094 - PCDHA2 chr5 140358534 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 4 5 Out-of-frame Inter-chr q26.3 q31.3 18174 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS17-PCDHA3 ADAMTS17 chr15 100871094 - PCDHA3 chr5 140358534 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 4 5 Out-of-frame Inter-chr q26.3 q31.3 18175 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS17-PCDHA4 ADAMTS17 chr15 100871094 - PCDHA4 chr5 140358534 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 4 5 Out-of-frame Inter-chr q26.3 q31.3 18176 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS17-PCDHA5 ADAMTS17 chr15 100871094 - PCDHA5 chr5 140358534 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 4 5 Out-of-frame Inter-chr q26.3 q31.3 18177 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS17-PCDHA6 ADAMTS17 chr15 100871094 - PCDHA6 chr5 140358534 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 4 5 Out-of-frame Inter-chr q26.3 q31.3 18178 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS17-PCDHA7 ADAMTS17 chr15 100871094 - PCDHA7 chr5 140358534 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 4 5 Out-of-frame Inter-chr q26.3 q31.3 18179 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS17-PCDHA8 ADAMTS17 chr15 100871094 - PCDHA8 chr5 140358534 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 4 5 Out-of-frame Inter-chr q26.3 q31.3 Seq+ 18180 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS17-PCDHA9 ADAMTS17 chr15 100871094 - PCDHA9 chr5 140358534 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 4 5 Out-of-frame Inter-chr q26.3 q31.3 18181 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS17-PCDHAC1 ADAMTS17 chr15 100871094 - PCDHAC1 chr5 140358534 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 4 5 Out-of-frame Inter-chr q26.3 q31.3 Seq+ 18182 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS17-PCDHAC2 ADAMTS17 chr15 100871094 - PCDHAC2 chr5 140358534 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 4 5 Out-of-frame Inter-chr q26.3 q31.3 Seq+ 18183 ChimerSeq STARFusion TCGA_RNA-Seq LRRC28-MEF2A LRRC28 chr15 99874334 + MEF2A chr15 100185766 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 4 5 Out-of-frame Intra-chr q26.3 q26.3 Transcription factor Seq+ 18184 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB45-ZFR2 ZBTB45 chr19 59027762 - ZFR2 chr19 3823401 - Exonic hg19 BRCA TCGA-BH-A0BP-01A 3 9 In-Frame Intra-chr q13.43 Transcription factor p13.3 Seq+ 18185 ChimerSeq STARFusion TCGA_RNA-Seq PTPRF-SZT2 PTPRF chr1 44019612 + SZT2 chr1 43880753 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 3 5 Out-of-frame Intra-chr p34.2 p34.2 18186 ChimerSeq STARFusion TCGA_RNA-Seq FAM129B-C4orf29 FAM129B chr9 130272425 - C4orf29 chr4 128904094 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 2 0 CDS-5'UTR Inter-chr q34.11 18187 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-PGAP3 GRB7 chr17 37899307 + PGAP3 chr17 37842272 - Exonic hg19 BRCA TCGA-BH-A202-01A 38 239 In-Frame Intra-chr q12 q12 Oncogene Seq+ 18188 ChimerSeq STARFusion TCGA_RNA-Seq RARA-WIPF2 RARA chr17 38487648 + WIPF2 chr17 38430042 + Exonic hg19 BRCA TCGA-BH-A202-01A 28 258 In-Frame Intra-chr q21.2 Oncogene Transcription factor q21.2 Seq+ 18189 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-PGAP3 GRB7 chr17 37898969 + PGAP3 chr17 37842272 - Exonic hg19 BRCA TCGA-BH-A202-01A 19 239 Out-of-frame Intra-chr q12 q12 Oncogene Seq+ 18190 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-PGAP3 GRB7 chr17 37898709 + PGAP3 chr17 37842272 - Exonic hg19 BRCA TCGA-BH-A202-01A 7 239 Out-of-frame Intra-chr q12 q12 Oncogene Seq+ 18191 ChimerSeq STARFusion TCGA_RNA-Seq KAT6A-MSR1 KAT6A chr8 41905896 - MSR1 chr8 16035501 - Exonic hg19 BRCA TCGA-BH-A202-01A 24 90 CDS-5'UTR Intra-chr p11.21 Oncogene p22 Seq+ 18192 ChimerSeq STARFusion TCGA_RNA-Seq RARA-SEPT9 RARA chr17 38487648 + SEPT9 chr17 75483506 + Exonic hg19 BRCA TCGA-BH-A202-01A 3 3 In-Frame Intra-chr q21.2 Oncogene Transcription factor 18193 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1467-EMP1 KIAA1467 chr12 13229077 + EMP1 chr12 13364403 + Exonic hg19 BRCA TCGA-BH-A202-01A 2 5 CDS-5'UTR Intra-chr p13.1 Tumor suppressor gene 18194 ChimerSeq STARFusion TCGA_RNA-Seq LOH12CR1-H2AFJ LOH12CR1 chr12 12588719 + H2AFJ chr12 14928225 + Exonic hg19 BRCA TCGA-BH-A202-01A 2 2 CDS-5'UTR Intra-chr p12.3 18195 ChimerSeq STARFusion TCGA_RNA-Seq BAG4-NEDD8 BAG4 chr8 38034657 + NEDD8 chr14 24687637 - Exonic hg19 BRCA TCGA-EW-A1PH-01A 207 490 In-Frame Inter-chr p11.23 q12 Seq+ 18196 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-ADAM32 WHSC1L1 chr8 38138985 - ADAM32 chr8 39131831 + Exonic hg19 BRCA TCGA-EW-A1PH-01A 29 150 Out-of-frame Intra-chr p11.23 Tumor suppressor gene Seq+ 18197 ChimerSeq STARFusion TCGA_RNA-Seq ATF6-SH2D1B ATF6 chr1 161772062 + SH2D1B chr1 162367105 - Exonic hg19 BRCA TCGA-EW-A1PH-01A 34 95 In-Frame Intra-chr q23.3 Transcription factor q23.3 Seq+ 18198 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-ADAM32 WHSC1L1 chr8 38139018 - ADAM32 chr8 39131831 + Exonic hg19 BRCA TCGA-EW-A1PH-01A 8 145 Out-of-frame Intra-chr p11.23 Tumor suppressor gene Seq+ 18199 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-ADAM32 WHSC1L1 chr8 38139018 - ADAM32 chr8 39138655 + Exonic hg19 BRCA TCGA-EW-A1PH-01A 4 145 Out-of-frame Intra-chr p11.23 Tumor suppressor gene Seq+ 18200 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-ADAM32 WHSC1L1 chr8 38138985 - ADAM32 chr8 39138655 + Exonic hg19 BRCA TCGA-EW-A1PH-01A 3 145 Out-of-frame Intra-chr p11.23 Tumor suppressor gene Seq+ 18201 ChimerSeq STARFusion TCGA_RNA-Seq RABGAP1L-CACYBP RABGAP1L chr1 174846743 + CACYBP chr1 174973750 + Exonic hg19 BRCA TCGA-EW-A1PH-01A 20 58 In-Frame Intra-chr q25.1 q25.1 Seq+ 18202 ChimerSeq STARFusion TCGA_RNA-Seq PLD3-ACTN4 PLD3 chr19 40854675 + ACTN4 chr19 39198757 + Exonic hg19 BRCA TCGA-EW-A1PH-01A 13 36 5'UTR-CDS Intra-chr q13.2 Seq+ 18203 ChimerSeq STARFusion TCGA_RNA-Seq RABGAP1L-CACYBP RABGAP1L chr1 174843644 + CACYBP chr1 174973750 + Exonic hg19 BRCA TCGA-EW-A1PH-01A 2 52 5'UTR-5'UTR Intra-chr q25.1 q25.1 Seq+ 18204 ChimerSeq STARFusion TCGA_RNA-Seq F11R-LSM14A F11R chr1 161008670 - LSM14A chr19 34685383 + Exonic hg19 BRCA TCGA-EW-A1PH-01A 7 5 5'UTR-CDS Inter-chr q23.3 18205 ChimerSeq STARFusion TCGA_RNA-Seq TSTD1-LSM14A TSTD1 chr1 161008670 - LSM14A chr19 34685383 + Exonic hg19 BRCA TCGA-EW-A1PH-01A 7 5 In-Frame Inter-chr q23.3 Seq+ 18206 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-SDC3 PUM1 chr1 31532051 - SDC3 chr1 31351587 - Exonic hg19 BRCA TCGA-EW-A1PH-01A 2 20 In-Frame Intra-chr p35.2 p35.2 Seq+ 18207 ChimerSeq STARFusion TCGA_RNA-Seq ATAD2-ZHX1 ATAD2 chr8 124369802 - ZHX1 chr8 124268411 - Exonic hg19 BRCA TCGA-EW-A1PH-01A 2 16 CDS-5'UTR Intra-chr q24.13 q24.13 Transcription factor 18208 ChimerSeq STARFusion TCGA_RNA-Seq NF2-CLTCL1 NF2 chr22 30079053 + CLTCL1 chr22 19171124 - Exonic hg19 BRCA TCGA-EW-A1PH-01A 2 11 3'UTR-CDS Intra-chr q12.2 Oncogene Tumor suppressor gene q11.21 Seq+ 18209 ChimerSeq STARFusion TCGA_RNA-Seq RMND5A-CD8A RMND5A chr2 87000558 + CD8A chr2 87013094 - Exonic hg19 BRCA TCGA-EW-A1PH-01A 3 7 3'UTR-3'UTR Intra-chr p11.2 p11.2 Seq+ 18210 ChimerSeq STARFusion TCGA_RNA-Seq SHROOM3-TRIM28 SHROOM3 chr4 77631440 + TRIM28 chr19 59060229 + Exonic hg19 BRCA TCGA-EW-A1PH-01A 3 6 Out-of-frame Inter-chr q21.1 q13.43 Seq+ 18211 ChimerSeq STARFusion TCGA_RNA-Seq NCAPG2-N4BP2 NCAPG2 chr7 158494513 - N4BP2 chr4 40154400 + Exonic hg19 BRCA TCGA-E9-A1R6-01A 14 43 Out-of-frame Inter-chr q36.3 p14 Seq+ 18212 ChimerSeq STARFusion TCGA_RNA-Seq NEDD4L-ZNF396 NEDD4L chr18 55919286 + ZNF396 chr18 32954328 - Exonic hg19 BRCA TCGA-E9-A1R6-01A 4 27 5'UTR-5'UTR Intra-chr q21.31 Tumor suppressor gene q12.2 Transcription factor Seq+ 18213 ChimerSeq STARFusion TCGA_RNA-Seq MYO5B-CLUL1 MYO5B chr18 47721137 - CLUL1 chr18 617988 + Exonic hg19 BRCA TCGA-E9-A1R6-01A 3 8 CDS-5'UTR Intra-chr q21.1 p11.32 Seq+ 18214 ChimerSeq STARFusion TCGA_RNA-Seq RAB12-MYO5B RAB12 chr18 8624996 + MYO5B chr18 47527781 - Exonic hg19 BRCA TCGA-E9-A1R6-01A 3 2 In-Frame Intra-chr p11.22 q21.1 Seq+ 18215 ChimerSeq STARFusion TCGA_RNA-Seq SLC22A15-ANO1 SLC22A15 chr1 116580009 + ANO1 chr11 69995816 + Exonic hg19 BRCA TCGA-A8-A0A6-01A 7 21 In-Frame Inter-chr p13.1 q13.3 Seq+ 18216 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-KDM2A PPFIA1 chr11 70208594 + KDM2A chr11 67024955 + Exonic hg19 BRCA TCGA-A8-A0A6-01A 4 13 5'UTR-5'UTR Intra-chr q13.3 q13.2 Transcription factor Seq+ 18217 ChimerSeq STARFusion TCGA_RNA-Seq MAN1A2-VANGL1 MAN1A2 chr1 117984947 + VANGL1 chr1 116224985 + Exonic hg19 BRCA TCGA-A8-A0A6-01A 2 10 In-Frame Intra-chr p12 p13.1 Seq+ 18218 ChimerSeq STARFusion TCGA_RNA-Seq UBE2W-ASPH UBE2W chr8 74717886 - ASPH chr8 62531578 - Exonic hg19 BRCA TCGA-A8-A0A6-01A 2 0 In-Frame Intra-chr q21.11 q12.3 18219 ChimerSeq STARFusion TCGA_RNA-Seq NDUFB9-TDRKH NDUFB9 chr8 125551528 + TDRKH chr1 151755525 - Exonic hg19 BRCA TCGA-AC-A6IX-06A 153 563 CDS-5'UTR Inter-chr q24.13 q21.3 Seq+ 18220 ChimerSeq STARFusion TCGA_RNA-Seq LRP12-LAPTM4B LRP12 chr8 105601047 - LAPTM4B chr8 98863625 + Exonic hg19 BRCA TCGA-AC-A6IX-06A 17 38 Out-of-frame Intra-chr q22.3 q22.1 Seq+ 18221 ChimerSeq STARFusion TCGA_RNA-Seq TOP3A-TEKT1 TOP3A chr17 18217913 - TEKT1 chr17 6719281 - Exonic hg19 BRCA TCGA-AC-A6IX-06A 4 26 Out-of-frame Intra-chr p13.1 Seq+ 18222 ChimerSeq STARFusion TCGA_RNA-Seq CYP4Z2P-SPATA6 CYP4Z2P chr1 47365930 - SPATA6 chr1 48918803 - Exonic hg19 BRCA TCGA-AC-A6IX-06A 5 21 3'UTR-CDS Intra-chr p33 p33 Seq+ 18223 ChimerSeq STARFusion TCGA_RNA-Seq DEPTOR-SELENBP1 DEPTOR chr8 121021372 + SELENBP1 chr1 151345174 - Exonic hg19 BRCA TCGA-AC-A6IX-06A 4 24 CDS-5'UTR Inter-chr q24.12 q21.3 Tumor suppressor gene 18224 ChimerSeq STARFusion TCGA_RNA-Seq TOP3A-TEKT1 TOP3A chr17 18217913 - TEKT1 chr17 6722677 - Exonic hg19 BRCA TCGA-AC-A6IX-06A 2 26 Out-of-frame Intra-chr p13.1 Seq+ 18225 ChimerSeq STARFusion TCGA_RNA-Seq CYP4Z2P-SPATA6 CYP4Z2P chr1 47364515 - SPATA6 chr1 48918803 - Exonic hg19 BRCA TCGA-AC-A6IX-06A 3 21 3'UTR-CDS Intra-chr p33 p33 Seq+ 18226 ChimerSeq STARFusion TCGA_RNA-Seq DEPTOR-SELENBP1 DEPTOR chr8 121021372 + SELENBP1 chr1 151342245 - Exonic hg19 BRCA TCGA-AC-A6IX-06A 2 24 Out-of-frame Inter-chr q24.12 q21.3 Tumor suppressor gene 18227 ChimerSeq STARFusion TCGA_RNA-Seq DCAF6-MPZL1 DCAF6 chr1 167974031 + MPZL1 chr1 167734820 + Exonic hg19 BRCA TCGA-A7-A26G-01A 53 141 In-Frame Intra-chr q24.2 q24.2 KB Seq+ 18228 ChimerSeq STARFusion TCGA_RNA-Seq TBCD-SLC9A3R1 TBCD chr17 80847573 + SLC9A3R1 chr17 72758151 + Exonic hg19 BRCA TCGA-A7-A26G-01A 34 152 In-Frame Intra-chr q25.1 Tumor suppressor gene Seq+ 18229 ChimerSeq STARFusion TCGA_RNA-Seq CCM2-PPIA CCM2 chr7 45078025 + PPIA chr7 44838846 + Exonic hg19 BRCA TCGA-A7-A26G-01A 28 51 In-Frame Intra-chr p13 p13 Seq+ 18230 ChimerSeq STARFusion TCGA_RNA-Seq MSH2-TTC7A MSH2 chr2 47641557 + TTC7A chr2 47233061 + Exonic hg19 BRCA TCGA-A7-A26G-01A 25 55 In-Frame Intra-chr p21 Oncogene Tumor suppressor gene p21 Seq+ 18231 ChimerSeq STARFusion TCGA_RNA-Seq NSD1-ZNF346 NSD1 chr5 176563031 + ZNF346 chr5 176468127 + Exonic hg19 BRCA TCGA-A7-A26G-01A 14 51 Out-of-frame Intra-chr q35.3 Oncogene q35.2 Transcription factor Seq+ 18232 ChimerSeq STARFusion TCGA_RNA-Seq RNF13-TM4SF4 RNF13 chr3 149531140 + TM4SF4 chr3 149216509 + Exonic hg19 BRCA TCGA-A7-A26G-01A 7 42 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 18233 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-SEC14L1 SEPT9 chr17 75398785 + SEC14L1 chr17 75186885 + Exonic hg19 BRCA TCGA-A7-A26G-01A 4 44 Out-of-frame Intra-chr q25.2 Seq+ 18234 ChimerSeq STARFusion TCGA_RNA-Seq ABI2-CYP20A1 ABI2 chr2 204231767 + CYP20A1 chr2 204161197 + Exonic hg19 BRCA TCGA-A7-A26G-01A 4 38 Out-of-frame Intra-chr q33.2 Tumor suppressor gene q33.2 Seq+ 18235 ChimerSeq STARFusion TCGA_RNA-Seq ABI2-CYP20A1 ABI2 chr2 204193354 + CYP20A1 chr2 204154488 + Exonic hg19 BRCA TCGA-A7-A26G-01A 4 38 Out-of-frame Intra-chr q33.2 Tumor suppressor gene q33.2 Seq+ 18236 ChimerSeq STARFusion TCGA_RNA-Seq ABI2-CYP20A1 ABI2 chr2 204231767 + CYP20A1 chr2 204161481 + Exonic hg19 BRCA TCGA-A7-A26G-01A 4 38 Out-of-frame Intra-chr q33.2 Tumor suppressor gene q33.2 Seq+ 18237 ChimerSeq STARFusion TCGA_RNA-Seq SMAD3-DIS3L SMAD3 chr15 67358698 + DIS3L chr15 66604062 + Exonic hg19 BRCA TCGA-A7-A26G-01A 8 17 Out-of-frame Intra-chr q22.33 Transcription factor q22.31 Seq+ 18238 ChimerSeq STARFusion TCGA_RNA-Seq RERE-ENO1 RERE chr1 8716032 - ENO1 chr1 8930569 - Exonic hg19 BRCA TCGA-A7-A26G-01A 3 34 In-Frame Intra-chr p36.23 p36.23 Seq+ 18239 ChimerSeq STARFusion TCGA_RNA-Seq LIFR-C9 LIFR chr5 38493708 - C9 chr5 39316131 - Exonic hg19 BRCA TCGA-A7-A26G-01A 7 12 Out-of-frame Intra-chr p13.1 Oncogene Tumor suppressor gene p13.1 Seq+ 18240 ChimerSeq STARFusion TCGA_RNA-Seq GMEB1-TRNAU1AP GMEB1 chr1 28995351 + TRNAU1AP chr1 28897688 + Exonic hg19 BRCA TCGA-A7-A26G-01A 9 1 5'UTR-5'UTR Intra-chr p35.3 Transcription factor p35.3 Seq+ 18241 ChimerSeq STARFusion TCGA_RNA-Seq MTF2-BRDT MTF2 chr1 93545088 + BRDT chr1 92469971 + Exonic hg19 BRCA TCGA-A7-A26G-01A 6 8 Out-of-frame Intra-chr p22.1 Transcription factor p22.1 Atypical:BRD Seq+ 18242 ChimerSeq STARFusion TCGA_RNA-Seq CD44-PDHX CD44 chr11 35211612 + PDHX chr11 34952951 + Exonic hg19 BRCA TCGA-A7-A26G-01A 4 13 In-Frame Intra-chr p13 Oncogene Tumor suppressor gene p13 Seq+ 18243 ChimerSeq STARFusion TCGA_RNA-Seq SMAD3-DIS3L SMAD3 chr15 67358698 + DIS3L chr15 66606377 + Exonic hg19 BRCA TCGA-A7-A26G-01A 3 17 Out-of-frame Intra-chr q22.33 Transcription factor q22.31 Seq+ 18244 ChimerSeq STARFusion TCGA_RNA-Seq ILKAP-PER2 ILKAP chr2 239090706 - PER2 chr2 239157853 - Exonic hg19 BRCA TCGA-A7-A26G-01A 5 7 In-Frame Intra-chr q37.3 q37.3 Tumor suppressor gene Seq+ 18245 ChimerSeq STARFusion TCGA_RNA-Seq DGCR2-CLTCL1 DGCR2 chr22 19076881 - CLTCL1 chr22 19263353 - Exonic hg19 BRCA TCGA-A7-A26G-01A 3 14 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 18246 ChimerSeq STARFusion TCGA_RNA-Seq RIC8B-RFX4 RIC8B chr12 107245372 + RFX4 chr12 107033110 + Exonic hg19 BRCA TCGA-A7-A26G-01A 4 8 In-Frame Intra-chr q23.3 q23.3 Transcription factor Seq+ 18247 ChimerSeq STARFusion TCGA_RNA-Seq PBRM1-TKT PBRM1 chr3 52692215 - TKT chr3 53276258 - Exonic hg19 BRCA TCGA-A7-A26G-01A 4 7 Out-of-frame Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 Tumor suppressor gene Seq+ 18248 ChimerSeq STARFusion TCGA_RNA-Seq SRBD1-CCDC88A SRBD1 chr2 45704132 - CCDC88A chr2 55646052 - Exonic hg19 BRCA TCGA-A7-A26G-01A 4 7 In-Frame Intra-chr p21 p16.1 Seq+ 18249 ChimerSeq STARFusion TCGA_RNA-Seq SH3KBP1-MAP7D2 SH3KBP1 chrX 19854243 - MAP7D2 chrX 20026516 - Exonic hg19 BRCA TCGA-A7-A26G-01A 2 14 CDS-3'UTR Intra-chr p22.12 p22.12 Seq+ 18250 ChimerSeq STARFusion TCGA_RNA-Seq TP53BP1-DMXL2 TP53BP1 chr15 43724392 - DMXL2 chr15 51809364 - Exonic hg19 BRCA TCGA-A7-A26G-01A 3 10 In-Frame Intra-chr q15.3 Tumor suppressor gene q21.2 Seq+ 18251 ChimerSeq STARFusion TCGA_RNA-Seq APBA2-GABRB3 APBA2 chr15 29288009 + GABRB3 chr15 26828561 - Exonic hg19 BRCA TCGA-A7-A26G-01A 3 8 5'UTR-CDS Intra-chr q12 Seq+ 18252 ChimerSeq STARFusion TCGA_RNA-Seq ICMT-ACOT7 ICMT chr1 6294946 - ACOT7 chr1 6378638 - Exonic hg19 BRCA TCGA-A7-A26G-01A 2 9 Out-of-frame Intra-chr p36.31 p36.31 Seq+ 18253 ChimerSeq STARFusion TCGA_RNA-Seq KIF1B-UBE4B KIF1B chr1 10292492 + UBE4B chr1 10155519 + Exonic hg19 BRCA TCGA-A7-A26G-01A 2 9 In-Frame Intra-chr p36.22 Tumor suppressor gene p36.22 Tumor suppressor gene Seq+ 18254 ChimerSeq STARFusion TCGA_RNA-Seq MCU-CDH23 MCU chr10 74452059 + CDH23 chr10 73434869 + Exonic hg19 BRCA TCGA-A7-A26G-01A 3 5 In-Frame Intra-chr q22.1 q22.1 Seq+ 18255 ChimerSeq STARFusion TCGA_RNA-Seq MTF2-BRDT MTF2 chr1 93545088 + BRDT chr1 92470676 + Exonic hg19 BRCA TCGA-A7-A26G-01A 2 8 In-Frame Intra-chr p22.1 Transcription factor p22.1 Atypical:BRD Seq+ 18256 ChimerSeq STARFusion TCGA_RNA-Seq MICU1-ASCC1 MICU1 chr10 74385768 - ASCC1 chr10 73892939 - Exonic hg19 BRCA TCGA-A7-A26G-01A 3 3 5'UTR-CDS Intra-chr q22.1 q22.1 18257 ChimerSeq STARFusion TCGA_RNA-Seq PCBP2-LINC00592 PCBP2 chr12 53846160 + LINC00592 chr12 52617230 + Exonic hg19 BRCA TCGA-A7-A26G-01A 3 1 5'UTR-5'UTR Intra-chr q13.13 q13.13 Seq+ 18258 ChimerSeq STARFusion TCGA_RNA-Seq ANK3-RHOBTB1 ANK3 chr10 62493021 - RHOBTB1 chr10 62671310 - Exonic hg19 BRCA TCGA-A7-A26G-01A 2 4 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 18259 ChimerSeq STARFusion TCGA_RNA-Seq ZNF653-ELOF1 ZNF653 chr19 11606765 - ELOF1 chr19 11665180 - Exonic hg19 BRCA TCGA-A7-A26G-01A 2 4 CDS-5'UTR Intra-chr p13.2 Transcription factor p13.2 Seq+ 18260 ChimerSeq STARFusion TCGA_RNA-Seq CDC5L-VEGFA CDC5L chr6 44376369 + VEGFA chr6 43752278 + Exonic hg19 BRCA TCGA-A7-A26G-01A 2 2 5'UTR-CDS Intra-chr p21.1 Transcription factor p21.1 Tumor suppressor gene 18261 ChimerSeq STARFusion TCGA_RNA-Seq MYO15B-NUP85 MYO15B chr17 73599026 + NUP85 chr17 73205918 + Exonic hg19 BRCA TCGA-A7-A26G-01A 2 2 5'UTR-CDS Intra-chr q25.1 q25.1 18262 ChimerSeq STARFusion TCGA_RNA-Seq RNF121-ANO1 RNF121 chr11 71671937 + ANO1 chr11 69933858 + Exonic hg19 BRCA TCGA-A7-A26G-01A 2 2 In-Frame Intra-chr q13.4 q13.3 Seq+ 18263 ChimerSeq STARFusion TCGA_RNA-Seq TLL2-PIK3AP1 TLL2 chr10 98273268 - PIK3AP1 chr10 98469740 - Exonic hg19 BRCA TCGA-A7-A26G-01A 2 2 In-Frame Intra-chr q24.1 q24.1 Seq+ 18264 ChimerSeq STARFusion TCGA_RNA-Seq DHX34-PPP5C DHX34 chr19 47861377 + PPP5C chr19 46857005 + Exonic hg19 BRCA TCGA-A7-A26G-01A 2 1 Out-of-frame Intra-chr q13.32 q13.32 Seq+ 18265 ChimerSeq STARFusion TCGA_RNA-Seq GAB2-NARS2 GAB2 chr11 78128692 - NARS2 chr11 78154804 - Exonic hg19 BRCA TCGA-A7-A26G-01A 2 0 In-Frame Intra-chr q14.1 q14.1 18266 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-SLC30A8 PVT1 chr8 128806980 + SLC30A8 chr8 118159058 + Exonic hg19 BRCA TCGA-C8-A12Z-01A 15 147 5'UTR-5'UTR Intra-chr q24.21 q24.11 Seq+ 18267 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-SLC30A8 PVT1 chr8 128808317 + SLC30A8 chr8 118159058 + Exonic hg19 BRCA TCGA-C8-A12Z-01A 8 147 5'UTR-5'UTR Intra-chr q24.21 q24.11 Seq+ 18268 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-SLC30A8 PVT1 chr8 128806980 + SLC30A8 chr8 118165183 + Exonic hg19 BRCA TCGA-C8-A12Z-01A 5 147 5'UTR-CDS Intra-chr q24.21 q24.11 Seq+ 18269 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-SLC30A8 PVT1 chr8 128867565 + SLC30A8 chr8 118147519 + Exonic hg19 BRCA TCGA-C8-A12Z-01A 4 147 5'UTR-5'UTR Intra-chr q24.21 q24.11 Seq+ 18270 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-SLC30A8 PVT1 chr8 128867565 + SLC30A8 chr8 118159058 + Exonic hg19 BRCA TCGA-C8-A12Z-01A 2 147 5'UTR-5'UTR Intra-chr q24.21 q24.11 Seq+ 18271 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-SLC30A8 PVT1 chr8 128867565 + SLC30A8 chr8 118165183 + Exonic hg19 BRCA TCGA-C8-A12Z-01A 2 147 5'UTR-CDS Intra-chr q24.21 q24.11 Seq+ 18272 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-SLC30A8 PVT1 chr8 128806980 + SLC30A8 chr8 118159193 + Exonic hg19 BRCA TCGA-C8-A12Z-01A 2 147 5'UTR-5'UTR Intra-chr q24.21 q24.11 Seq+ 18273 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-SLC30A8 PVT1 chr8 128808317 + SLC30A8 chr8 118159193 + Exonic hg19 BRCA TCGA-C8-A12Z-01A 2 147 5'UTR-5'UTR Intra-chr q24.21 q24.11 Seq+ 18274 ChimerSeq STARFusion TCGA_RNA-Seq ATF7-SPATS2 ATF7 chr12 53946325 - SPATS2 chr12 49890616 + Exonic hg19 BRCA TCGA-C8-A12Z-01A 8 51 In-Frame Intra-chr q13.13 Transcription factor q13.12 Seq+ 18275 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A6-TBX15 SLC39A6 chr18 33709077 - TBX15 chr1 119441748 - Exonic hg19 BRCA TCGA-C8-A12Z-01A 7 20 5'UTR-CDS Inter-chr q12.2 p12 Transcription factor Seq+ 18276 ChimerSeq STARFusion TCGA_RNA-Seq ANK3-WDFY4 ANK3 chr10 61905726 - WDFY4 chr10 49917761 + Exonic hg19 BRCA TCGA-E2-A10C-01A 5 7 CDS-5'UTR Intra-chr q21.2 q11.23 Seq+ 18277 ChimerSeq STARFusion TCGA_RNA-Seq GDI2-NDUFA1 GDI2 chr10 5836848 - NDUFA1 chrX 119010477 + Exonic hg19 BRCA TCGA-E2-A10C-01A 2 0 Out-of-frame Inter-chr p15.1 q24 18278 ChimerSeq STARFusion TCGA_RNA-Seq GNE-ERP27 GNE chr9 36276891 - ERP27 chr12 15073982 - Exonic hg19 BRCA TCGA-A2-A25F-01A 32 289 In-Frame Inter-chr p13.3 p12.3 Seq+ 18279 ChimerSeq STARFusion TCGA_RNA-Seq LANCL2-TFDP2 LANCL2 chr7 55469013 + TFDP2 chr3 141682805 - Exonic hg19 BRCA TCGA-A2-A25F-01A 15 30 In-Frame Inter-chr p11.2 q23 Transcription factor Seq+ 18280 ChimerSeq STARFusion TCGA_RNA-Seq TFDP2-LANCL2 TFDP2 chr3 141811903 - LANCL2 chr7 55466116 + Exonic hg19 BRCA TCGA-A2-A25F-01A 7 28 In-Frame Inter-chr q23 Transcription factor p11.2 Seq+ 18281 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-TRAPPC9 PTK2 chr8 142011224 - TRAPPC9 chr8 141381279 - Exonic hg19 BRCA TCGA-A2-A25F-01A 2 7 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 18282 ChimerSeq STARFusion TCGA_RNA-Seq CELSR1-MAFF CELSR1 chr22 46768780 - MAFF chr22 38609830 + Exonic hg19 BRCA TCGA-A2-A25F-01A 2 6 CDS-5'UTR Intra-chr q13.31 q13.1 Transcription factor Seq+ 18283 ChimerSeq STARFusion TCGA_RNA-Seq DIXDC1-C11orf1 DIXDC1 chr11 111800634 + C11orf1 chr11 111754495 + Exonic hg19 BRCA TCGA-A2-A25F-01A 2 5 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 18284 ChimerSeq STARFusion TCGA_RNA-Seq FBXO32-ANXA13 FBXO32 chr8 124518632 - ANXA13 chr8 124724993 - Exonic hg19 BRCA TCGA-A2-A25F-01A 2 5 In-Frame Intra-chr q24.13 Tumor suppressor gene q24.13 Seq+ 18285 ChimerSeq STARFusion TCGA_RNA-Seq NLN-ERBB2IP NLN chr5 65018241 + ERBB2IP chr5 65284463 + Exonic hg19 BRCA TCGA-A2-A25F-01A 2 1 CDS-5'UTR Intra-chr q12.3 18286 ChimerSeq STARFusion TCGA_RNA-Seq SIK3-PPP1R1B SIK3 chr11 116968859 - PPP1R1B chr17 37785423 + Exonic hg19 BRCA TCGA-EW-A2FR-01A 74 139 In-Frame Inter-chr q23.3 q12 Tumor suppressor gene Seq+ 18287 ChimerSeq STARFusion TCGA_RNA-Seq SIK3-PPP1R1B SIK3 chr11 116968859 - PPP1R1B chr17 37783559 + Exonic hg19 BRCA TCGA-EW-A2FR-01A 9 134 CDS-5'UTR Inter-chr q23.3 q12 Tumor suppressor gene Seq+ 18288 ChimerSeq STARFusion TCGA_RNA-Seq SDHAF2-ACTN3 SDHAF2 chr11 61197654 + ACTN3 chr11 66318710 + Exonic hg19 BRCA TCGA-EW-A2FR-01A 4 39 In-Frame Intra-chr q12.2 q13.2 Seq+ 18289 ChimerSeq STARFusion TCGA_RNA-Seq SDHAF2-ACTN3 SDHAF2 chr11 61197654 + ACTN3 chr11 66321516 + Exonic hg19 BRCA TCGA-EW-A2FR-01A 3 39 Out-of-frame Intra-chr q12.2 q13.2 Seq+ 18290 ChimerSeq STARFusion TCGA_RNA-Seq HECTD1-SCFD1 HECTD1 chr14 31626046 - SCFD1 chr14 31177196 + Exonic hg19 BRCA TCGA-EW-A2FR-01A 5 15 Out-of-frame Intra-chr q12 q12 Seq+ 18291 ChimerSeq STARFusion TCGA_RNA-Seq ASH2L-PPP1R14A ASH2L chr8 37976881 + PPP1R14A chr19 38742086 - Exonic hg19 BRCA TCGA-EW-A2FR-01A 3 16 Out-of-frame Inter-chr p11.23 q13.2 Seq+ 18292 ChimerSeq STARFusion TCGA_RNA-Seq HAUS8-C19orf57 HAUS8 chr19 17170367 - C19orf57 chr19 14001275 - Exonic hg19 BRCA TCGA-EW-A2FR-01A 2 16 In-Frame Intra-chr p13.11 p13.12 Seq+ 18293 ChimerSeq STARFusion TCGA_RNA-Seq MLPH-OCIAD1 MLPH chr2 238436159 + OCIAD1 chr4 48834637 + Exonic hg19 BRCA TCGA-GM-A3NY-01A 2 1 Out-of-frame Inter-chr q37.3 p11 18294 ChimerSeq STARFusion TCGA_RNA-Seq RNF144B-LYRM4 RNF144B chr6 18399930 + LYRM4 chr6 5109725 - Exonic hg19 BRCA TCGA-A8-A0AD-01A 25 89 In-Frame Intra-chr p22.3 p25.1 Seq+ 18295 ChimerSeq STARFusion TCGA_RNA-Seq ATXN1-PCTP ATXN1 chr6 16486203 - PCTP chr17 53844696 + Exonic hg19 BRCA TCGA-A8-A0AD-01A 11 38 5'UTR-5'UTR Inter-chr p22.3 q22 Seq+ 18296 ChimerSeq STARFusion TCGA_RNA-Seq MAPT-MARCH10 MAPT chr17 44039836 + 2019_ 3_ 10_ chr17 60865960 - Exonic hg19 BRCA TCGA-A8-A0AD-01A 12 11 Out-of-frame Intra-chr q23.2 Seq+ 18297 ChimerSeq STARFusion TCGA_RNA-Seq BTBD9-FARS2 BTBD9 chr6 38312760 - FARS2 chr6 5545413 + Exonic hg19 BRCA TCGA-A8-A0AD-01A 8 21 In-Frame Intra-chr p21.2 p25.1 Seq+ 18298 ChimerSeq STARFusion TCGA_RNA-Seq KDM1B-PITPNC1 KDM1B chr6 18171710 + PITPNC1 chr17 65574302 + Exonic hg19 BRCA TCGA-A8-A0AD-01A 5 13 In-Frame Inter-chr p22.3 q24.2 Seq+ 18299 ChimerSeq STARFusion TCGA_RNA-Seq C16orf45-POMT2 C16orf45 chr16 15528616 + POMT2 chr14 77772784 - Exonic hg19 BRCA TCGA-A8-A0AD-01A 4 15 Out-of-frame Inter-chr q24.3 Seq+ 18300 ChimerSeq STARFusion TCGA_RNA-Seq MED1-EYS MED1 chr17 37607291 - EYS chr6 66349785 - Exonic hg19 BRCA TCGA-A8-A0AD-01A 6 7 CDS-5'UTR Inter-chr q12 Tumor suppressor gene q12 Seq+ 18301 ChimerSeq STARFusion TCGA_RNA-Seq MAPT-MARCH10 MAPT chr17_ctg5_hap1 827863 - 2019_ 3_ 10_ chr17 60865960 - Exonic hg19 BRCA TCGA-A8-A0AD-01A 2 2 Out-of-frame Inter-chr q23.2 Seq+ 18302 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-INTS4 UVRAG chr11 75623083 + INTS4 chr11 77618856 - Exonic hg19 BRCA TCGA-A1-A0SJ-01A 41 125 In-Frame Intra-chr q13.5 Tumor suppressor gene q14.1 Seq+ 18303 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-CHD6 TANC2 chr17 61086987 + CHD6 chr20 40086068 - Exonic hg19 BRCA TCGA-A1-A0SJ-01A 40 80 Out-of-frame Inter-chr q23.2 q12 Seq+ 18304 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-CHD6 TANC2 chr17 61086987 + CHD6 chr20 40102157 - Exonic hg19 BRCA TCGA-A1-A0SJ-01A 24 80 Out-of-frame Inter-chr q23.2 q12 Seq+ 18305 ChimerSeq STARFusion TCGA_RNA-Seq WNT11-TSPAN8 WNT11 chr11 75917369 - TSPAN8 chr12 71551567 - Exonic hg19 BRCA TCGA-A1-A0SJ-01A 10 13 CDS-5'UTR Inter-chr q13.5 Tumor suppressor gene q21.1 Seq+ 18306 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP42-PGR ARHGAP42 chr11 100558563 + PGR chr11 100933483 - Exonic hg19 BRCA TCGA-A1-A0SJ-01A 8 17 In-Frame Intra-chr q22.1 q22.1 Tumor suppressor gene Transcription factor Seq+ 18307 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-NFS1 BCAS3 chr17 59112151 + NFS1 chr20 34262539 - Exonic hg19 BRCA TCGA-A1-A0SJ-01A 6 16 Out-of-frame Inter-chr q23.2 q11.22 Seq+ 18308 ChimerSeq STARFusion TCGA_RNA-Seq ZFP91-NOX4 ZFP91 chr11 58352357 + NOX4 chr11 89088211 - Exonic hg19 BRCA TCGA-A1-A0SJ-01A 3 15 In-Frame Intra-chr q12.1 Transcription factor q14.3 Seq+ 18309 ChimerSeq STARFusion TCGA_RNA-Seq DTX4-CCDC102B DTX4 chr11 58959723 + CCDC102B chr18 66721267 + Exonic hg19 BRCA TCGA-A1-A0SJ-01A 4 10 In-Frame Inter-chr q12.1 q22.1 Seq+ 18310 ChimerSeq STARFusion TCGA_RNA-Seq ADNP-SYCP2 ADNP chr20 49518554 - SYCP2 chr20 58468648 - Exonic hg19 BRCA TCGA-A1-A0SJ-01A 2 12 In-Frame Intra-chr q13.13 Transcription factor q13.33 Seq+ 18311 ChimerSeq STARFusion TCGA_RNA-Seq ZFC3H1-CDH4 ZFC3H1 chr12 72013095 - CDH4 chr20 60427810 + Exonic hg19 BRCA TCGA-A1-A0SJ-01A 3 5 Out-of-frame Inter-chr q21.1 q13.33 Tumor suppressor gene Seq+ 18312 ChimerSeq STARFusion TCGA_RNA-Seq KCNMB4-LINC00673 KCNMB4 chr12 70794116 + LINC00673 chr17 70424439 - Exonic hg19 BRCA TCGA-A1-A0SJ-01A 2 1 Out-of-frame Inter-chr q15 18313 ChimerSeq STARFusion TCGA_RNA-Seq LRCH1-MC2R LRCH1 chr13 47127838 + MC2R chr18 13885645 - Exonic hg19 BRCA TCGA-A1-A0SJ-01A 2 0 CDS-5'UTR Inter-chr q14.13 p11.21 18314 ChimerSeq STARFusion TCGA_RNA-Seq SEC23A-PSMC1 SEC23A chr14 39565102 - PSMC1 chr14 90738617 + Exonic hg19 BRCA TCGA-E2-A15P-01A 42 27 Out-of-frame Intra-chr q21.1 q32.11 Seq+ 18315 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB7A-MLLT1 ZBTB7A chr19 4055010 - MLLT1 chr19 6270770 - Exonic hg19 BRCA TCGA-E2-A15P-01A 8 62 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 18316 ChimerSeq STARFusion TCGA_RNA-Seq INADL-GLIS1 INADL chr1 62483619 + GLIS1 chr1 54065951 - Exonic hg19 BRCA TCGA-E2-A15P-01A 4 17 CDS-5'UTR Intra-chr p32.3 Transcription factor Seq+ 18317 ChimerSeq STARFusion TCGA_RNA-Seq SMAP1-C14orf132 SMAP1 chr6 71442214 + C14orf132 chr14 96552848 + Exonic hg19 BRCA TCGA-E2-A15P-01A 2 9 In-Frame Inter-chr q13 q32.2 Seq+ 18318 ChimerSeq STARFusion TCGA_RNA-Seq GLA-HNRNPH2 GLA chrX 100662698 - HNRNPH2 chrX 100666924 + Exonic hg19 BRCA TCGA-S3-A6ZF-01A 59 207 CDS-5'UTR Intra-chr q22.1 q22.1 Seq+ 18319 ChimerSeq STARFusion TCGA_RNA-Seq CD99L2-CXorf66 CD99L2 chrX 150066995 - CXorf66 chrX 139040376 - Exonic hg19 BRCA TCGA-S3-A6ZF-01A 14 36 In-Frame Intra-chr q28 q27.1 Seq+ 18320 ChimerSeq STARFusion TCGA_RNA-Seq TRPC4AP-TOX2 TRPC4AP chr20 33597990 - TOX2 chr20 42694352 + Exonic hg19 BRCA TCGA-S3-A6ZF-01A 2 32 Out-of-frame Intra-chr q11.22 q13.12 Seq+ 18321 ChimerSeq STARFusion TCGA_RNA-Seq BLNK-PIK3AP1 BLNK chr10 97976409 - PIK3AP1 chr10 98388250 - Exonic hg19 BRCA TCGA-S3-A6ZF-01A 6 12 In-Frame Intra-chr q24.1 Oncogene Tumor suppressor gene q24.1 Seq+ 18322 ChimerSeq STARFusion TCGA_RNA-Seq RNF44-NXF3 RNF44 chr5 175963941 - NXF3 chrX 102339423 - Exonic hg19 BRCA TCGA-S3-A6ZF-01A 3 14 5'UTR-CDS Inter-chr q35.2 q22.1 Seq+ 18323 ChimerSeq STARFusion TCGA_RNA-Seq BLNK-PIK3AP1 BLNK chr10 97969594 - PIK3AP1 chr10 98388250 - Exonic hg19 BRCA TCGA-S3-A6ZF-01A 2 12 Out-of-frame Intra-chr q24.1 Oncogene Tumor suppressor gene q24.1 Seq+ 18324 ChimerSeq STARFusion TCGA_RNA-Seq CCDC149-GABRB1 CCDC149 chr4 24914439 - GABRB1 chr4 47033931 + Exonic hg19 BRCA TCGA-S3-A6ZF-01A 2 8 Out-of-frame Intra-chr p15.2 p12 Seq+ 18325 ChimerSeq STARFusion TCGA_RNA-Seq SMARCB1-SDF4 SMARCB1 chr22 24135875 + SDF4 chr1 1164326 - Exonic hg19 BRCA TCGA-S3-A6ZF-01A 3 3 CDS-5'UTR Inter-chr q11.23 Oncogene Tumor suppressor gene p36.33 18326 ChimerSeq STARFusion TCGA_RNA-Seq CHD6-WFDC11 CHD6 chr20 40246979 - WFDC11 chr20 44279290 - Exonic hg19 BRCA TCGA-AQ-A54O-01A 2 6 5'UTR-5'UTR Intra-chr q12 q13.12 Seq+ 18327 ChimerSeq STARFusion TCGA_RNA-Seq CHD6-WFDC11 CHD6 chr20 40246979 - WFDC11 chr20 44278038 - Exonic hg19 BRCA TCGA-AQ-A54O-01A 2 6 5'UTR-CDS Intra-chr q12 q13.12 Seq+ 18328 ChimerSeq STARFusion TCGA_RNA-Seq TOP1-PKIG TOP1 chr20 39690130 + PKIG chr20 43218438 + Exonic hg19 BRCA TCGA-AQ-A54O-01A 2 1 CDS-5'UTR Intra-chr q12 Oncogene q13.12 18329 ChimerSeq STARFusion TCGA_RNA-Seq LAMC1-RNA45S5 LAMC1 chr1 183114052 + RNA45S5 chrUn_gl000220 116412 + Exonic hg19 BRCA TCGA-AC-A3QQ-01B 3 1 Out-of-frame Inter-chr q25.3 18330 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PGAP3 RARA chr17 38474700 + PGAP3 chr17 37842272 - Exonic hg19 BRCA TCGA-A8-A08B-01A 3 18 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q12 Oncogene Seq+ 18331 ChimerSeq STARFusion TCGA_RNA-Seq UBAP1-HMGB1 UBAP1 chr9 34179238 + HMGB1 chr13 31037831 - Exonic hg19 BRCA TCGA-A8-A08B-01A 2 1 5'UTR-5'UTR Inter-chr p13.3 q12.3 18332 ChimerSeq STARFusion TCGA_RNA-Seq SPTAN1-AUH SPTAN1 chr9 131331176 + AUH chr9 94087686 - Exonic hg19 BRCA TCGA-B6-A0RM-01A 3 18 Out-of-frame Intra-chr q34.11 q22.31 Seq+ 18333 ChimerSeq STARFusion TCGA_RNA-Seq HEATR3-CHRNB3 HEATR3 chr16 50100180 + CHRNB3 chr8 42585737 + Exonic hg19 BRCA TCGA-B6-A0RM-01A 2 6 In-Frame Inter-chr q12.1 p11.21 Seq+ 18334 ChimerSeq STARFusion TCGA_RNA-Seq HEATR3-CHRNB3 HEATR3 chr16 50100450 + CHRNB3 chr8 42585737 + Exonic hg19 BRCA TCGA-B6-A0RM-01A 2 6 Out-of-frame Inter-chr q12.1 p11.21 Seq+ 18335 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF18-MYO9B ARHGEF18 chr19 7512054 + MYO9B chr19 17256207 + Exonic hg19 BRCA TCGA-E9-A1NG-01A 5 18 In-Frame Intra-chr p13.2 p13.11 Seq+ 18336 ChimerSeq STARFusion TCGA_RNA-Seq IGF1R-ADPGK IGF1R chr15 99251336 + ADPGK chr15 73064186 - Exonic hg19 BRCA TCGA-GM-A2DK-01A 7 17 Out-of-frame Intra-chr q26.3 TK:InsR Oncogene q24.1 Seq+ 18337 ChimerSeq STARFusion TCGA_RNA-Seq IL1RAPL1-MAGEB10 IL1RAPL1 chrX 28807542 + MAGEB10 chrX 27835671 + Exonic hg19 BRCA TCGA-GM-A2DK-01A 2 4 CDS-5'UTR Intra-chr p21.3 p21.3 Seq+ 18338 ChimerSeq STARFusion TCGA_RNA-Seq PALLD-NAA15 PALLD chr4 169589519 + NAA15 chr4 140291365 + Exonic hg19 BRCA TCGA-AN-A04C-01A 38 134 In-Frame Intra-chr q32.3 q31.1 Seq+ 18339 ChimerSeq STARFusion TCGA_RNA-Seq CLCN3-SMAD1 CLCN3 chr4 170557239 + SMAD1 chr4 146474936 + Exonic hg19 BRCA TCGA-AN-A04C-01A 26 72 In-Frame Intra-chr q33 q31.21 Transcription factor Seq+ 18340 ChimerSeq STARFusion TCGA_RNA-Seq ATG5-QRSL1 ATG5 chr6 106727536 - QRSL1 chr6 107113657 + Exonic hg19 BRCA TCGA-AN-A04C-01A 14 85 In-Frame Intra-chr q21 q21 Seq+ 18341 ChimerSeq STARFusion TCGA_RNA-Seq FAM160A1-IL15 FAM160A1 chr4 152510078 + IL15 chr4 142653891 + Exonic hg19 BRCA TCGA-AN-A04C-01A 15 56 In-Frame Intra-chr q31.3 q31.21 Seq+ 18342 ChimerSeq STARFusion TCGA_RNA-Seq UTRN-PERP UTRN chr6 144898424 + PERP chr6 138417631 - Exonic hg19 BRCA TCGA-AN-A04C-01A 12 24 Out-of-frame Intra-chr q24.2 q23.3 Seq+ 18343 ChimerSeq STARFusion TCGA_RNA-Seq PCTP-CALCOCO2 PCTP chr17 53828605 + CALCOCO2 chr17 46937676 + Exonic hg19 BRCA TCGA-AN-A04C-01A 9 25 In-Frame Intra-chr q22 q21.32 Seq+ 18344 ChimerSeq STARFusion TCGA_RNA-Seq UBE2Z-ZNF652 UBE2Z chr17 46998634 + ZNF652 chr17 47395345 - Exonic hg19 BRCA TCGA-AN-A04C-01A 6 12 CDS-5'UTR Intra-chr q21.32 q21.33 Transcription factor Seq+ 18345 ChimerSeq STARFusion TCGA_RNA-Seq UBE2Z-ZNF652 UBE2Z chr17 46998634 + ZNF652 chr17 47399870 - Exonic hg19 BRCA TCGA-AN-A04C-01A 6 12 CDS-5'UTR Intra-chr q21.32 q21.33 Transcription factor Seq+ 18346 ChimerSeq STARFusion TCGA_RNA-Seq PCTP-CALCOCO2 PCTP chr17 53828605 + CALCOCO2 chr17 46939638 + Exonic hg19 BRCA TCGA-AN-A04C-01A 2 25 Out-of-frame Intra-chr q22 q21.32 Seq+ 18347 ChimerSeq STARFusion TCGA_RNA-Seq COX6B1-SERTAD1 COX6B1 chr19 36142251 + SERTAD1 chr19 40929453 - Exonic hg19 BRCA TCGA-AN-A04C-01A 4 12 CDS-5'UTR Intra-chr q13.12 q13.2 Seq+ 18348 ChimerSeq STARFusion TCGA_RNA-Seq NLK-LGALS9 NLK chr17 26370357 + LGALS9 chr17 25967598 + Exonic hg19 BRCA TCGA-AR-A1AJ-01A 6 36 In-Frame Intra-chr q11.2 CMGC:MAPK q11.2 Seq+ 18349 ChimerSeq STARFusion TCGA_RNA-Seq RNF170-GOLGA7 RNF170 chr8 42725147 - GOLGA7 chr8 41355028 + Exonic hg19 BRCA TCGA-AR-A1AJ-01A 2 15 Out-of-frame Intra-chr p11.21 p11.21 Seq+ 18350 ChimerSeq STARFusion TCGA_RNA-Seq PTPN1-LOC284751 PTPN1 chr20 49127127 + LOC284751 chr20 48914693 + Exonic hg19 BRCA TCGA-AR-A1AJ-01A 3 7 CDS-5'UTR Intra-chr q13.13 Tumor suppressor gene 18351 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF2-C7orf41 ZNRF2 chr7 30363353 + C7orf41 chr7 30197054 + Exonic hg19 BRCA TCGA-AR-A1AJ-01A 2 7 Out-of-frame Intra-chr p14.3 Seq+ 18352 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 BRCA TCGA-AR-A1AJ-01A 2 4 3'UTR-5'UTR Intra-chr q34 18353 ChimerSeq STARFusion TCGA_RNA-Seq FBXL4-ASCC3 FBXL4 chr6 99395682 - ASCC3 chr6 101315914 - Exonic hg19 BRCA TCGA-AR-A1AJ-01A 2 0 5'UTR-5'UTR Intra-chr q16.2 q16.3 18354 ChimerSeq STARFusion TCGA_RNA-Seq GPR56-LOC613037 GPR56 chr16 57675620 + LOC613037 chr16 30238690 - Exonic hg19 BRCA TCGA-A2-A0CQ-01A 2 0 5'UTR-3'UTR Intra-chr q21 18355 ChimerSeq STARFusion TCGA_RNA-Seq FBXO22-SNX33 FBXO22 chr15 76209735 + SNX33 chr15 75949303 + Exonic hg19 BRCA TCGA-A7-A0CG-01A 3 26 In-Frame Intra-chr q24.2 q24.2 Seq+ 18356 ChimerSeq STARFusion TCGA_RNA-Seq NFX1-DNAJA1 NFX1 chr9 33319125 + DNAJA1 chr9 33038683 + Exonic hg19 BRCA TCGA-A7-A0CG-01A 2 9 Out-of-frame Intra-chr p13.3 Transcription factor p21.1 Seq+ 18357 ChimerSeq STARFusion TCGA_RNA-Seq LRP6-GPR19 LRP6 chr12 12397196 - GPR19 chr12 12815404 - Exonic hg19 BRCA TCGA-A7-A0CG-01A 2 6 CDS-5'UTR Intra-chr p13.1 Seq+ 18358 ChimerSeq STARFusion TCGA_RNA-Seq HSP90AB1-SLC29A1 HSP90AB1 chr6 44214932 + SLC29A1 chr6 44195000 + Exonic hg19 BRCA TCGA-BH-A0WA-01A 31 396 5'UTR-5'UTR Intra-chr p21.1 Oncogene p21.1 Seq+ 18359 ChimerSeq STARFusion TCGA_RNA-Seq HSP90AB1-SLC29A1 HSP90AB1 chr6 44214932 + SLC29A1 chr6 44194997 + Exonic hg19 BRCA TCGA-BH-A0WA-01A 25 394 5'UTR-5'UTR Intra-chr p21.1 Oncogene p21.1 Seq+ 18360 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-C19orf53 ZSWIM4 chr19 13910735 + C19orf53 chr19 13885264 + Exonic hg19 BRCA TCGA-BH-A0WA-01A 5 18 CDS-5'UTR Intra-chr p13.13 p13.13 18361 ChimerSeq STARFusion TCGA_RNA-Seq PRKAR1A-ZBTB20 PRKAR1A chr17 66521099 + ZBTB20 chr3 114746421 - Exonic hg19 BRCA TCGA-BH-A0WA-01A 5 10 CDS-5'UTR Inter-chr q24.2 Oncogene Tumor suppressor gene q13.31 Transcription factor Seq+ 18362 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF26-LINC00880 ARHGEF26 chr3 153847508 + LINC00880 chr3 156801064 - Exonic hg19 BRCA TCGA-BH-A0WA-01A 6 4 Out-of-frame Intra-chr q25.31 18363 ChimerSeq STARFusion TCGA_RNA-Seq UBA3-FRMD4B UBA3 chr3 69126949 - FRMD4B chr3 69225807 - Exonic hg19 BRCA TCGA-BH-A0WA-01A 2 15 Out-of-frame Intra-chr p14.1 p14.1 Seq+ 18364 ChimerSeq STARFusion TCGA_RNA-Seq FLNA-TKTL1 FLNA chrX 153602874 - TKTL1 chrX 153533656 + Exonic hg19 BRCA TCGA-D8-A1Y0-01A 63 67 5'UTR-CDS Intra-chr q28 Tumor suppressor gene q28 Seq+ 18365 ChimerSeq STARFusion TCGA_RNA-Seq WDYHV1-CDHR2 WDYHV1 chr8 124442273 + CDHR2 chr5 175992339 + Exonic hg19 BRCA TCGA-D8-A1Y0-01A 17 56 CDS-5'UTR Inter-chr q24.13 q35.2 Seq+ 18366 ChimerSeq STARFusion TCGA_RNA-Seq NANS-NCBP1 NANS chr9 100845304 + NCBP1 chr9 100420922 + Exonic hg19 BRCA TCGA-D8-A1Y0-01A 5 17 Out-of-frame Intra-chr q22.33 q22.33 Seq+ 18367 ChimerSeq STARFusion TCGA_RNA-Seq CLIP4-FAM179A CLIP4 chr2 29368233 + FAM179A chr2 29217591 + Exonic hg19 BRCA TCGA-D8-A1Y0-01A 4 15 CDS-5'UTR Intra-chr p23.2 Seq+ 18368 ChimerSeq STARFusion TCGA_RNA-Seq SLC1A3-METTL15 SLC1A3 chr5 36671335 + METTL15 chr11 28311753 + Exonic hg19 BRCA TCGA-D8-A1Y0-01A 2 6 In-Frame Inter-chr p13.2 p14.1 Seq+ 18369 ChimerSeq STARFusion TCGA_RNA-Seq LOC100130872-CTBP1 LOC100130872 chr4 1198770 - CTBP1 chr4 1232125 - Exonic hg19 BRCA TCGA-D8-A1Y0-01A 2 0 3'UTR-CDS Intra-chr p16.3 18370 ChimerSeq STARFusion TCGA_RNA-Seq MTF1-SF3A3 MTF1 chr1 38322923 - SF3A3 chr1 38435407 - Exonic hg19 BRCA TCGA-AR-A0TT-01A 25 71 In-Frame Intra-chr p34.3 Transcription factor p34.3 Seq+ 18371 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG3 STK25 chr2 242434915 - IGHG3 chr14 106237745 - Exonic hg19 BRCA TCGA-AR-A0TT-01A 35 0 Out-of-frame Inter-chr q37.3 18372 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK2-NBPF13P MAPKAPK2 chr1 206858853 + NBPF13P chr1 146587901 - Exonic hg19 BRCA TCGA-AR-A0TT-01A 21 42 Out-of-frame Intra-chr q32.1 CAMK:MAPKAPK q21.1 Seq+ 18373 ChimerSeq STARFusion TCGA_RNA-Seq USP21-IL19 USP21 chr1 161134748 + IL19 chr1 207016004 + Exonic hg19 BRCA TCGA-AR-A0TT-01A 5 50 Out-of-frame Intra-chr q23.3 q32.1 Seq+ 18374 ChimerSeq STARFusion TCGA_RNA-Seq ASH1L-FAM78B ASH1L chr1 155365250 - FAM78B chr1 166040000 - Exonic hg19 BRCA TCGA-AR-A0TT-01A 12 19 Out-of-frame Intra-chr q22 Transcription factor q24.1 Seq+ 18375 ChimerSeq STARFusion TCGA_RNA-Seq EFNA3-USP21 EFNA3 chr1 155058681 + USP21 chr1 161130410 + Exonic hg19 BRCA TCGA-AR-A0TT-01A 7 35 CDS-5'UTR Intra-chr q21.3 q23.3 Seq+ 18376 ChimerSeq STARFusion TCGA_RNA-Seq EFNA3-USP21 EFNA3 chr1 155058681 + USP21 chr1 161130410 + Exonic hg19 BRCA TCGA-AR-A0TT-01A 7 35 CDS-5'UTR Intra-chr q21.3 q23.3 Seq+ 18377 ChimerSeq STARFusion TCGA_RNA-Seq CCSER2-MBL3P CCSER2 chr10 86133571 + MBL3P chr10 81344132 - Exonic hg19 BRCA TCGA-AR-A0TT-01A 6 25 Out-of-frame Intra-chr q23.1 q22.3 Seq+ 18378 ChimerSeq STARFusion TCGA_RNA-Seq UBE2Q1-MAEL UBE2Q1 chr1 154525212 - MAEL chr1 166974313 + Exonic hg19 BRCA TCGA-AR-A0TT-01A 5 22 Out-of-frame Intra-chr q21.3 q24.1 Seq+ 18379 ChimerSeq STARFusion TCGA_RNA-Seq MAK16-ANGPT2 MAK16 chr8 33347857 + ANGPT2 chr8 6390008 - Exonic hg19 BRCA TCGA-AR-A0TT-01A 6 13 In-Frame Intra-chr p12 p23.1 Seq+ 18380 ChimerSeq STARFusion TCGA_RNA-Seq TPCN1-IGHG3 TPCN1 chr12 113659186 + IGHG3 chr14 106329449 - Exonic hg19 BRCA TCGA-AR-A0TT-01A 9 1 Out-of-frame Inter-chr q24.13 18381 ChimerSeq STARFusion TCGA_RNA-Seq UBE2Q1-MAEL UBE2Q1 chr1 154525508 - MAEL chr1 166974313 + Exonic hg19 BRCA TCGA-AR-A0TT-01A 4 21 In-Frame Intra-chr q21.3 q24.1 Seq+ 18382 ChimerSeq STARFusion TCGA_RNA-Seq PIEZO1-IGHJ4 PIEZO1 chr16 88799074 - IGHJ4 chr14 106330467 - Exonic hg19 BRCA TCGA-AR-A0TT-01A 7 1 Out-of-frame Inter-chr q24.3 18383 ChimerSeq STARFusion TCGA_RNA-Seq UBE2Q1-MAEL UBE2Q1 chr1 154525212 - MAEL chr1 166974493 + Exonic hg19 BRCA TCGA-AR-A0TT-01A 2 21 In-Frame Intra-chr q21.3 q24.1 Seq+ 18384 ChimerSeq STARFusion TCGA_RNA-Seq INPP5A-DLG2 INPP5A chr10 134464009 + DLG2 chr11 84245774 - Exonic hg19 BRCA TCGA-AR-A0TT-01A 3 15 In-Frame Inter-chr q26.3 q14.1 Seq+ 18385 ChimerSeq STARFusion TCGA_RNA-Seq PIEZO1-IGHG3 PIEZO1 chr16 88799074 - IGHG3 chr14 106330467 - Exonic hg19 BRCA TCGA-AR-A0TT-01A 6 2 Out-of-frame Inter-chr q24.3 18386 ChimerSeq STARFusion TCGA_RNA-Seq AKAP8-MYO9B AKAP8 chr19 15490524 - MYO9B chr19 17212470 + Exonic hg19 BRCA TCGA-AR-A0TT-01A 2 11 CDS-5'UTR Intra-chr p13.12 Transcription factor p13.11 Seq+ 18387 ChimerSeq STARFusion TCGA_RNA-Seq AKAP8L-EFCAB3 AKAP8L chr19 15507961 - EFCAB3 chr17 60472429 + Exonic hg19 BRCA TCGA-AR-A0TT-01A 2 11 Out-of-frame Inter-chr p13.12 Transcription factor q23.2 Seq+ 18388 ChimerSeq STARFusion TCGA_RNA-Seq GPSM2-SPATA42 GPSM2 chr1 109445856 + SPATA42 chr1 109400780 + Exonic hg19 BRCA TCGA-AR-A0TT-01A 2 7 Out-of-frame Intra-chr p13.3 p13.3 18389 ChimerSeq STARFusion TCGA_RNA-Seq VAV3-SLC25A24 VAV3 chr1 108185241 - SLC25A24 chr1 108728576 - Exonic hg19 BRCA TCGA-AC-A2FE-01A 2 1 In-Frame Intra-chr p13.3 18390 ChimerSeq STARFusion TCGA_RNA-Seq CAPN6-DCX CAPN6 chrX 110490596 - DCX chrX 110544971 - Exonic hg19 BRCA TCGA-E2-A14N-01A 3 29 In-Frame Intra-chr q23 q23 Seq+ 18391 ChimerSeq STARFusion TCGA_RNA-Seq FRMD3-BRD4 FRMD3 chr9 85987828 - BRD4 chr19 15365073 - Exonic hg19 BRCA TCGA-E2-A14N-01A 9 5 In-Frame Inter-chr q21.32 p13.12 Atypical:BRD Seq+ 18392 ChimerSeq STARFusion TCGA_RNA-Seq ZHX2-VAV3 ZHX2 chr8 123875778 + VAV3 chr1 108185377 - Exonic hg19 BRCA TCGA-E2-A14N-01A 5 5 5'UTR-CDS Inter-chr q24.13 Tumor suppressor gene Transcription factor p13.3 Seq+ 18393 ChimerSeq STARFusion TCGA_RNA-Seq CDK5RAP2-ENG CDK5RAP2 chr9 123280705 - ENG chr9 130588951 - Exonic hg19 BRCA TCGA-E2-A14N-01A 3 12 In-Frame Intra-chr q33.2 q34.11 Seq+ 18394 ChimerSeq STARFusion TCGA_RNA-Seq VAV3-ZHX2 VAV3 chr1 108138834 - ZHX2 chr8 123875716 + Exonic hg19 BRCA TCGA-E2-A14N-01A 2 11 CDS-5'UTR Inter-chr p13.3 q24.13 Tumor suppressor gene Transcription factor Seq+ 18395 ChimerSeq STARFusion TCGA_RNA-Seq ATL2-DHX57 ATL2 chr2 38604285 - DHX57 chr2 39030057 - Exonic hg19 BRCA TCGA-E2-A14N-01A 2 8 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 18396 ChimerSeq STARFusion TCGA_RNA-Seq PPP3CA-SPARCL1 PPP3CA chr4 102267896 - SPARCL1 chr4 88420737 - Exonic hg19 BRCA TCGA-E2-A14N-01A 2 6 CDS-5'UTR Intra-chr q24 q22.1 Tumor suppressor gene Seq+ 18397 ChimerSeq STARFusion TCGA_RNA-Seq TPR-ZNF354B TPR chr1 186286614 - ZNF354B chr5 178287998 + Exonic hg19 BRCA TCGA-E2-A14N-01A 3 0 CDS-5'UTR Inter-chr q31.1 Oncogene q35.3 Transcription factor 18398 ChimerSeq STARFusion TCGA_RNA-Seq PDLIM3-SORBS2 PDLIM3 chr4 186456496 - SORBS2 chr4 186508842 - Exonic hg19 BRCA TCGA-E2-A14N-01A 2 2 Out-of-frame Intra-chr q35.1 q35.1 Seq+ 18399 ChimerSeq STARFusion TCGA_RNA-Seq MED13L-ANKRD13A MED13L chr12 116401212 - ANKRD13A chr12 110449810 + Exonic hg19 BRCA TCGA-E2-A14N-01A 2 1 Out-of-frame Intra-chr q24.21 q24.11 Seq+ 18400 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-DAP3 RCC1 chr1 28832596 + DAP3 chr1 155695173 + Exonic hg19 BRCA TCGA-E2-A14N-01A 2 0 5'UTR-CDS Intra-chr p35.3 q22 Seq+ 18401 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-ICA1 RCC1 chr1 28834672 + ICA1 chr7 8183602 - Exonic hg19 BRCA TCGA-E2-A14N-01A 2 0 5'UTR-CDS Inter-chr p35.3 p21.3 Seq+ 18402 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-DAP3 SNHG3 chr1 28832596 + DAP3 chr1 155695173 + Exonic hg19 BRCA TCGA-E2-A14N-01A 2 0 5'UTR-CDS Intra-chr p35.3 q22 18403 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-ICA1 SNHG3 chr1 28834672 + ICA1 chr7 8183602 - Exonic hg19 BRCA TCGA-E2-A14N-01A 2 0 5'UTR-CDS Inter-chr p35.3 p21.3 18404 ChimerSeq STARFusion TCGA_RNA-Seq ZNF204P-GNAS ZNF204P chr6 27342973 - GNAS chr20 57470667 + Exonic hg19 BRCA TCGA-E2-A14N-01A 2 0 3'UTR-3'UTR Inter-chr p22.1 q13.32 Oncogene 18405 ChimerSeq STARFusion TCGA_RNA-Seq GGA3-SMIM5 GGA3 chr17 73257629 - SMIM5 chr17 73630114 + Exonic hg19 BRCA TCGA-C8-A1HI-01A 81 51 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 18406 ChimerSeq STARFusion TCGA_RNA-Seq TRPM7-TMEM104 TRPM7 chr15 50949978 - TMEM104 chr17 72832066 + Exonic hg19 BRCA TCGA-C8-A1HI-01A 9 44 Out-of-frame Inter-chr q21.2 q25.1 Seq+ 18407 ChimerSeq STARFusion TCGA_RNA-Seq RMDN3-SKA2 RMDN3 chr15 41037175 - SKA2 chr17 57196856 - Exonic hg19 BRCA TCGA-C8-A1HI-01A 6 52 Out-of-frame Inter-chr q15.1 q22 Seq+ 18408 ChimerSeq STARFusion TCGA_RNA-Seq RMDN3-SKA2 RMDN3 chr15 41043624 - SKA2 chr17 57189706 - Exonic hg19 BRCA TCGA-C8-A1HI-01A 6 52 Out-of-frame Inter-chr q15.1 q22 Seq+ 18409 ChimerSeq STARFusion TCGA_RNA-Seq IGF1R-TRIP4 IGF1R chr15 99486281 + TRIP4 chr15 64737205 + Exonic hg19 BRCA TCGA-C8-A1HI-01A 10 24 Out-of-frame Intra-chr q26.3 TK:InsR Oncogene q22.31 Seq+ 18410 ChimerSeq STARFusion TCGA_RNA-Seq TRPM7-TMEM104 TRPM7 chr15 50949978 - TMEM104 chr17 72826201 + Exonic hg19 BRCA TCGA-C8-A1HI-01A 4 44 Out-of-frame Inter-chr q21.2 q25.1 Seq+ 18411 ChimerSeq STARFusion TCGA_RNA-Seq ARPP19-MYO5A ARPP19 chr15 52861045 - MYO5A chr15 52615641 - Exonic hg19 BRCA TCGA-C8-A1HI-01A 4 20 In-Frame Intra-chr q21.2 q21.2 Seq+ 18412 ChimerSeq STARFusion TCGA_RNA-Seq MEIS2-MYO5A MEIS2 chr15 37329015 - MYO5A chr15 52664560 - Exonic hg19 BRCA TCGA-C8-A1HI-01A 4 5 In-Frame Intra-chr q14 Transcription factor q21.2 Seq+ 18413 ChimerSeq STARFusion TCGA_RNA-Seq AP3S2-CERS3 AP3S2 chr15 90414707 - CERS3 chr15 101024873 - Exonic hg19 BRCA TCGA-C8-A1HI-01A 4 4 In-Frame Intra-chr q26.1 q26.3 18414 ChimerSeq STARFusion TCGA_RNA-Seq IGF1R-C15orf41 IGF1R chr15 99251336 + C15orf41 chr15 36936479 + Exonic hg19 BRCA TCGA-C8-A1HI-01A 2 10 Out-of-frame Intra-chr q26.3 TK:InsR Oncogene q14 Seq+ 18415 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6C-SCAPER TNRC6C chr17 76047529 + SCAPER chr15 76697020 - Exonic hg19 BRCA TCGA-C8-A1HI-01A 2 6 Out-of-frame Inter-chr q25.3 q24.3 Seq+ 18416 ChimerSeq STARFusion TCGA_RNA-Seq IGF1R-LRRC28 IGF1R chr15 99251336 + LRRC28 chr15 99892574 + Exonic hg19 BRCA TCGA-C8-A1HI-01A 2 3 In-Frame Intra-chr q26.3 TK:InsR Oncogene q26.3 18417 ChimerSeq STARFusion TCGA_RNA-Seq ZNF160-ADAM5 ZNF160 chr19 53594890 - ADAM5 chr8 39274733 + Exonic hg19 BRCA TCGA-BH-A0GY-01A 12 209 Out-of-frame Inter-chr q13.42 Transcription factor p11.22 Seq+ 18418 ChimerSeq STARFusion TCGA_RNA-Seq ZNF160-ADAM5 ZNF160 chr19 53594666 - ADAM5 chr8 39274733 + Exonic hg19 BRCA TCGA-BH-A0GY-01A 5 206 Out-of-frame Inter-chr q13.42 Transcription factor p11.22 Seq+ 18419 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB14-IGL@ DNAJB14 chr4 100820113 - IGL@ chr22 23241799 + Exonic hg19 BRCA TCGA-BH-A0GY-01A 28 0 Out-of-frame Inter-chr q23 q11.22 18420 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB14-IGLC3 DNAJB14 chr4 100820113 - IGLC3 chr22 23241799 + Exonic hg19 BRCA TCGA-BH-A0GY-01A 28 0 Out-of-frame Inter-chr q23 q11.22 18421 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB14-IGLJ2 DNAJB14 chr4 100820113 - IGLJ2 chr22 23241799 + Exonic hg19 BRCA TCGA-BH-A0GY-01A 28 0 Out-of-frame Inter-chr q23 q11.22 18422 ChimerSeq STARFusion TCGA_RNA-Seq CTSZ-ZHX3 CTSZ chr20 57571694 - ZHX3 chr20 39813841 - Exonic hg19 BRCA TCGA-BH-A0GY-01A 2 64 Out-of-frame Intra-chr q13.32 q12 Transcription factor Seq+ 18423 ChimerSeq STARFusion TCGA_RNA-Seq CTSZ-ZHX3 CTSZ chr20 57572658 - ZHX3 chr20 39813841 - Exonic hg19 BRCA TCGA-BH-A0GY-01A 2 64 Out-of-frame Intra-chr q13.32 q12 Transcription factor Seq+ 18424 ChimerSeq STARFusion TCGA_RNA-Seq LRP3-THAP8 LRP3 chr19 33693892 + THAP8 chr19 36531038 - Exonic hg19 BRCA TCGA-BH-A0GY-01A 4 21 In-Frame Intra-chr q13.11 q13.12 Transcription factor Seq+ 18425 ChimerSeq STARFusion TCGA_RNA-Seq IGSF3-MAN1A2 IGSF3 chr1 117208906 - MAN1A2 chr1 117944808 + Exonic hg19 BRCA TCGA-BH-A0GY-01A 2 11 Out-of-frame Intra-chr p13.1 p12 Seq+ 18426 ChimerSeq STARFusion TCGA_RNA-Seq MED1-ABCC3 MED1 chr17 37604051 - ABCC3 chr17 48733193 + Exonic hg19 BRCA TCGA-BH-A0AW-01A 191 479 In-Frame Intra-chr q12 Tumor suppressor gene q21.33 Seq+ 18427 ChimerSeq STARFusion TCGA_RNA-Seq HDHD2-SNF8 HDHD2 chr18 44676749 - SNF8 chr17 47014486 - Exonic hg19 BRCA TCGA-BH-A0AW-01A 17 94 5'UTR-CDS Inter-chr q21.1 q21.32 Seq+ 18428 ChimerSeq STARFusion TCGA_RNA-Seq THRA-B4GALNT2 THRA chr17 38233861 + B4GALNT2 chr17 47236399 + Exonic hg19 BRCA TCGA-BH-A0AW-01A 3 13 In-Frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.32 Seq+ 18429 ChimerSeq STARFusion TCGA_RNA-Seq TRPV6-KEL TRPV6 chr7 142583134 - KEL chr7 142640970 - Exonic hg19 BRCA TCGA-LL-A5YO-01A 12 63 Out-of-frame Intra-chr q34 Seq+ 18430 ChimerSeq STARFusion TCGA_RNA-Seq EIF1-MED28 EIF1 chr17 39846193 + MED28 chr4 17621524 + Exonic hg19 BRCA TCGA-D8-A1X5-01A 188 413 In-Frame Inter-chr q21.2 p15.32 Seq+ 18431 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-C11orf30 UVRAG chr11 75776832 + C11orf30 chr11 76239312 + Exonic hg19 BRCA TCGA-D8-A1X5-01A 4 50 In-Frame Intra-chr q13.5 Tumor suppressor gene Seq+ 18432 ChimerSeq STARFusion TCGA_RNA-Seq FAM102B-TMEM56 FAM102B chr1 109103187 + TMEM56 chr1 95558128 + Exonic hg19 BRCA TCGA-D8-A1X5-01A 5 29 CDS-5'UTR Intra-chr p13.3 p21.3 Seq+ 18433 ChimerSeq STARFusion TCGA_RNA-Seq FAM102B-TMEM56 FAM102B chr1 109103187 + TMEM56 chr1 95609447 + Exonic hg19 BRCA TCGA-D8-A1X5-01A 5 29 CDS-5'UTR Intra-chr p13.3 p21.3 Seq+ 18434 ChimerSeq STARFusion TCGA_RNA-Seq USP35-TSHZ2 USP35 chr11 77900203 + TSHZ2 chr20 52103683 + Exonic hg19 BRCA TCGA-D8-A1X5-01A 5 21 5'UTR-3'UTR Inter-chr q14.1 q13.2 Transcription factor Seq+ 18435 ChimerSeq STARFusion TCGA_RNA-Seq GPR125-ERBB2 GPR125 chr4 22475395 - ERBB2 chr17 37849514 + Exonic hg19 BRCA TCGA-D8-A1X5-01A 5 17 CDS-5'UTR Inter-chr q12 Oncogene 18436 ChimerSeq STARFusion TCGA_RNA-Seq GPR125-ERBB2 GPR125 chr4 22475395 - ERBB2 chr17 37844949 + Exonic hg19 BRCA TCGA-D8-A1X5-01A 4 17 CDS-5'UTR Inter-chr q12 Oncogene 18437 ChimerSeq STARFusion TCGA_RNA-Seq LIMCH1-APBB2 LIMCH1 chr4 41526495 + APBB2 chr4 41102767 - Exonic hg19 BRCA TCGA-D8-A1X5-01A 6 9 CDS-5'UTR Intra-chr p13 p13 Seq+ 18438 ChimerSeq STARFusion TCGA_RNA-Seq SLC30A9-NSUN7 SLC30A9 chr4 41992777 + NSUN7 chr4 40792619 + Exonic hg19 BRCA TCGA-D8-A1X5-01A 2 20 In-Frame Intra-chr p13 p14 Seq+ 18439 ChimerSeq STARFusion TCGA_RNA-Seq ACO2-ZC3H7B ACO2 chr22 41865186 + ZC3H7B chr22 41751473 + Exonic hg19 BRCA TCGA-D8-A1X5-01A 4 10 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 18440 ChimerSeq STARFusion TCGA_RNA-Seq TMEM56-FNBP1L TMEM56 chr1 95639445 + FNBP1L chr1 93965025 + Exonic hg19 BRCA TCGA-D8-A1X5-01A 3 14 Out-of-frame Intra-chr p21.3 p22.1 Seq+ 18441 ChimerSeq STARFusion TCGA_RNA-Seq DDB1-DAK DDB1 chr11 61100380 - DAK chr11 61105413 + Exonic hg19 BRCA TCGA-AO-A1KT-01A 53 80 Out-of-frame Intra-chr q12.2 Seq+ 18442 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-GAB2 WHSC1L1 chr8 38239317 - GAB2 chr11 77991947 - Exonic hg19 BRCA TCGA-AO-A1KT-01A 22 66 5'UTR-5'UTR Inter-chr p11.23 Tumor suppressor gene q14.1 Seq+ 18443 ChimerSeq STARFusion TCGA_RNA-Seq C11orf30-LOC441242 C11orf30 chr11 76183884 + LOC441242 chr7 65136187 - Exonic hg19 BRCA TCGA-AO-A1KT-01A 4 1 CDS-3'UTR Inter-chr 18444 ChimerSeq STARFusion TCGA_RNA-Seq NFIA-ST6GALNAC3 NFIA chr1 61872399 + ST6GALNAC3 chr1 77042531 + Exonic hg19 BRCA TCGA-AO-A1KT-01A 2 2 Out-of-frame Intra-chr p31.3 Transcription factor p31.1 Seq+ 18445 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R13L-GNAS PPP1R13L chr19 45909550 - GNAS chr20 57470667 + Exonic hg19 BRCA TCGA-AO-A1KT-01A 2 1 5'UTR-5'UTR Inter-chr q13.32 q13.32 Oncogene 18446 ChimerSeq STARFusion TCGA_RNA-Seq CACNA1D-CD47 CACNA1D chr3 53535747 + CD47 chr3 107766139 - Exonic hg19 BRCA TCGA-AO-A1KT-01A 2 0 In-Frame Intra-chr p21.1 q13.12 18447 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-OSBPL1A FGFR3 chr4 1795770 + OSBPL1A chr18 21761243 - Exonic hg19 BRCA TCGA-AO-A1KT-01A 2 0 Out-of-frame Inter-chr p16.3 TK:FGFR Oncogene q11.2 18448 ChimerSeq STARFusion TCGA_RNA-Seq COG5-FOXP2 COG5 chr7 107167682 - FOXP2 chr7 114329837 + Exonic hg19 BRCA TCGA-AC-A2QH-01B 7 23 Out-of-frame Intra-chr q31.1 Transcription factor Seq+ 18449 ChimerSeq STARFusion TCGA_RNA-Seq CDH2-KIAA1328 CDH2 chr18 25727637 - KIAA1328 chr18 34646853 + Exonic hg19 BRCA TCGA-AC-A2QH-01B 4 22 Out-of-frame Intra-chr q12.1 Oncogene q12.2 Seq+ 18450 ChimerSeq STARFusion TCGA_RNA-Seq TRA2A-LOC729852 TRA2A chr7 23571408 - LOC729852 chr7 7712940 + Exonic hg19 BRCA TCGA-AC-A2QH-01B 4 21 CDS-5'UTR Intra-chr p15.3 18451 ChimerSeq STARFusion TCGA_RNA-Seq SREBF1-LRRC48 SREBF1 chr17 17740041 - LRRC48 chr17 17877166 + Exonic hg19 BRCA TCGA-AC-A2QH-01B 7 8 CDS-5'UTR Intra-chr p11.2 Transcription factor Seq+ 18452 ChimerSeq STARFusion TCGA_RNA-Seq RMRP-RNA45S5 RMRP chr9 35657940 - RNA45S5 chrUn_gl000220 118768 + Exonic hg19 BRCA TCGA-AC-A2QH-01B 3 7 Out-of-frame Inter-chr p13.3 18453 ChimerSeq STARFusion TCGA_RNA-Seq STX8-MYO15A STX8 chr17 9479109 - MYO15A chr17 18027797 + Exonic hg19 BRCA TCGA-AC-A2QH-01B 4 0 Out-of-frame Intra-chr p13.1 p11.2 18454 ChimerSeq STARFusion TCGA_RNA-Seq RPPH1-RNA45S5 RPPH1 chr14 20811437 - RNA45S5 chrUn_gl000220 114571 + Exonic hg19 BRCA TCGA-AC-A2QH-01B 3 2 Out-of-frame Inter-chr q11.2 18455 ChimerSeq STARFusion TCGA_RNA-Seq GON4L-YY1AP1 GON4L chr1 155731981 - YY1AP1 chr1 155631214 - Exonic hg19 BRCA TCGA-AC-A2QH-01B 2 0 In-Frame Intra-chr q22 q22 18456 ChimerSeq STARFusion TCGA_RNA-Seq PLD3-BLVRB PLD3 chr19 40880527 + BLVRB chr19 40957399 - Exonic hg19 BRCA TCGA-A7-A26F-01A 2 26 Out-of-frame Intra-chr q13.2 q13.2 18457 ChimerSeq STARFusion TCGA_RNA-Seq PTBP3-ENDOG PTBP3 chr9 115095750 - ENDOG chr9 131583018 + Exonic hg19 BRCA TCGA-A7-A26F-01A 2 24 Out-of-frame Intra-chr q32 q34.11 18458 ChimerSeq STARFusion TCGA_RNA-Seq TMEM243-DMTF1 TMEM243 chr7 86848742 - DMTF1 chr7 86822514 + Exonic hg19 BRCA TCGA-A7-A26F-01A 2 7 Out-of-frame Intra-chr q21.12 q21.12 Tumor suppressor gene Transcription factor 18459 ChimerSeq STARFusion TCGA_RNA-Seq CCBP2-KRBOX1 CCBP2 chr3 42861203 + KRBOX1 chr3 42980342 + Exonic hg19 BRCA TCGA-A7-A26F-01A 2 4 5'UTR-5'UTR Intra-chr p22.1 Seq+ 18460 ChimerSeq STARFusion TCGA_RNA-Seq ELL2-SPATA9 ELL2 chr5 95297279 - SPATA9 chr5 94999752 - Exonic hg19 BRCA TCGA-A7-A26F-01A 2 2 In-Frame Intra-chr q15 q15 Seq+ 18461 ChimerSeq STARFusion TCGA_RNA-Seq NPAS2-RPL31 NPAS2 chr2 101436876 + RPL31 chr2 101620620 + Exonic hg19 BRCA TCGA-A7-A26F-01A 2 0 5'UTR-CDS Intra-chr q11.2 Tumor suppressor gene Transcription factor q11.2 18462 ChimerSeq STARFusion TCGA_RNA-Seq SNX8-MAD1L1 SNX8 chr7 2309194 - MAD1L1 chr7 2041756 - Exonic hg19 BRCA TCGA-BH-A0B6-01A 11 20 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 18463 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-PPP2R5E PTK2 chr8 141900642 - PPP2R5E chr14 63920603 - Exonic hg19 BRCA TCGA-BH-A0B6-01A 7 22 Out-of-frame Inter-chr q24.3 q23.2 Seq+ 18464 ChimerSeq STARFusion TCGA_RNA-Seq ELMSAN1-ACOT1 ELMSAN1 chr14 74253805 - ACOT1 chr14 74008197 + Exonic hg19 BRCA TCGA-BH-A0B6-01A 2 33 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 18465 ChimerSeq STARFusion TCGA_RNA-Seq ANKS1B-NDUFA12 ANKS1B chr12 100048845 - NDUFA12 chr12 95365396 - Exonic hg19 BRCA TCGA-BH-A0B6-01A 6 9 Out-of-frame Intra-chr q23.1 q22 Seq+ 18466 ChimerSeq STARFusion TCGA_RNA-Seq SPARC-DHCR24 SPARC chr5 151042419 - DHCR24 chr1 55319725 - Exonic hg19 BRCA TCGA-BH-A1FE-06A 3 4 Out-of-frame Inter-chr q33.1 Tumor suppressor gene p32.3 18467 ChimerSeq STARFusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23739998 - APOO chrX 23899069 - Exonic hg19 BRCA TCGA-A7-A13D-01A 113 1846 In-Frame Intra-chr p22.11 p22.11 Seq+ 18468 ChimerSeq STARFusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23748644 - APOO chrX 23851729 - Exonic hg19 BRCA TCGA-A7-A13D-01A 93 1846 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 18469 ChimerSeq STARFusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23748644 - APOO chrX 23851627 - Exonic hg19 BRCA TCGA-A7-A13D-01A 47 1846 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 18470 ChimerSeq STARFusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23761242 - APOO chrX 23851627 - Exonic hg19 BRCA TCGA-A7-A13D-01A 39 1846 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 18471 ChimerSeq STARFusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23761242 - APOO chrX 23851729 - Exonic hg19 BRCA TCGA-A7-A13D-01A 15 1846 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 18472 ChimerSeq STARFusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23731252 - APOO chrX 23899069 - Exonic hg19 BRCA TCGA-A7-A13D-01A 13 1846 Out-of-frame Intra-chr p22.11 p22.11 Seq+ 18473 ChimerSeq STARFusion TCGA_RNA-Seq CD59-FBXO3 CD59 chr11 33731752 - FBXO3 chr11 33780147 - Exonic hg19 BRCA TCGA-A7-A13D-01A 90 158 Out-of-frame Intra-chr p13 p13 Seq+ 18474 ChimerSeq STARFusion TCGA_RNA-Seq UNC13D-SRP68 UNC13D chr17 73829047 - SRP68 chr17 74035423 - Exonic hg19 BRCA TCGA-A7-A13D-01A 23 263 CDS-3'UTR Intra-chr q25.1 q25.1 Seq+ 18475 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-MMP27 TMEM123 chr11 102319543 - MMP27 chr11 102563772 - Exonic hg19 BRCA TCGA-A7-A13D-01A 64 88 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 18476 ChimerSeq STARFusion TCGA_RNA-Seq UNC13D-SRP68 UNC13D chr17 73828955 - SRP68 chr17 74035522 - Exonic hg19 BRCA TCGA-A7-A13D-01A 3 263 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 18477 ChimerSeq STARFusion TCGA_RNA-Seq MTF2-RPL5 MTF2 chr1 93581175 + RPL5 chr1 93306108 + Exonic hg19 BRCA TCGA-A7-A13D-01A 14 63 Out-of-frame Intra-chr p22.1 Transcription factor p22.1 Tumor suppressor gene Seq+ 18478 ChimerSeq STARFusion TCGA_RNA-Seq ASXL1-TM9SF4 ASXL1 chr20 30956926 + TM9SF4 chr20 30720816 + Exonic hg19 BRCA TCGA-A7-A13D-01A 13 59 In-Frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 18479 ChimerSeq STARFusion TCGA_RNA-Seq PARN-RRN3 PARN chr16 14711447 - RRN3 chr16 15178562 - Exonic hg19 BRCA TCGA-A7-A13D-01A 18 28 In-Frame Intra-chr p13.11 Seq+ 18480 ChimerSeq STARFusion TCGA_RNA-Seq ARIH2-DHX30 ARIH2 chr3 49011249 + DHX30 chr3 47887190 + Exonic hg19 BRCA TCGA-A7-A13D-01A 13 45 In-Frame Intra-chr p21.31 p21.31 Seq+ 18481 ChimerSeq STARFusion TCGA_RNA-Seq RNF19A-SNX31 RNF19A chr8 101271335 - SNX31 chr8 101586188 - Exonic hg19 BRCA TCGA-A7-A13D-01A 3 65 Out-of-frame Intra-chr q22.2 q22.3 Seq+ 18482 ChimerSeq STARFusion TCGA_RNA-Seq DPP3-PACS1 DPP3 chr11 66264948 + PACS1 chr11 65998019 + Exonic hg19 BRCA TCGA-A7-A13D-01A 10 25 In-Frame Intra-chr q13.2 q13.1 Seq+ 18483 ChimerSeq STARFusion TCGA_RNA-Seq KDM6B-TMEM95 KDM6B chr17 7755426 + TMEM95 chr17 7259504 + Exonic hg19 BRCA TCGA-A7-A13D-01A 3 52 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 18484 ChimerSeq STARFusion TCGA_RNA-Seq EPS15L1-MED26 EPS15L1 chr19 16582724 - MED26 chr19 16689220 - Exonic hg19 BRCA TCGA-A7-A13D-01A 7 20 In-Frame Intra-chr p13.11 p13.11 Seq+ 18485 ChimerSeq STARFusion TCGA_RNA-Seq PBX1-DISC1 PBX1 chr1 164532548 + DISC1 chr1 232094574 + Exonic hg19 BRCA TCGA-A7-A13D-01A 4 24 In-Frame Intra-chr q23.3 Oncogene Transcription factor q42.2 Seq+ 18486 ChimerSeq STARFusion TCGA_RNA-Seq TCF3-AP3D1 TCF3 chr19 1621837 - AP3D1 chr19 2111827 - Exonic hg19 BRCA TCGA-A7-A13D-01A 5 19 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p13.3 Seq+ 18487 ChimerSeq STARFusion TCGA_RNA-Seq TANGO6-CDH1 TANGO6 chr16 68901123 + CDH1 chr16 68855904 + Exonic hg19 BRCA TCGA-A7-A13D-01A 6 12 Out-of-frame Intra-chr q22.1 q22.1 Oncogene Tumor suppressor gene 18488 ChimerSeq STARFusion TCGA_RNA-Seq ARID1A-DHDDS ARID1A chr1 27059283 + DHDDS chr1 26764659 + Exonic hg19 BRCA TCGA-A7-A13D-01A 4 19 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 Seq+ 18489 ChimerSeq STARFusion TCGA_RNA-Seq EXOC6B-SFXN5 EXOC6B chr2 72945232 - SFXN5 chr2 73250343 - Exonic hg19 BRCA TCGA-A7-A13D-01A 6 11 In-Frame Intra-chr p13.2 p13.2 Seq+ 18490 ChimerSeq STARFusion TCGA_RNA-Seq RPRD2-VPS45 RPRD2 chr1 150418877 + VPS45 chr1 150053424 + Exonic hg19 BRCA TCGA-A7-A13D-01A 4 19 In-Frame Intra-chr q21.2 q21.2 Seq+ 18491 ChimerSeq STARFusion TCGA_RNA-Seq LIMK2-OSBP2 LIMK2 chr22 31621805 + OSBP2 chr22 31266416 + Exonic hg19 BRCA TCGA-A7-A13D-01A 6 8 Out-of-frame Intra-chr q12.2 TKL:LISK q12.2 Seq+ 18492 ChimerSeq STARFusion TCGA_RNA-Seq TAF4-GATA5 TAF4 chr20 60639507 - GATA5 chr20 61040977 - Exonic hg19 BRCA TCGA-A7-A13D-01A 5 11 Out-of-frame Intra-chr q13.33 Tumor suppressor gene Transcription factor Seq+ 18493 ChimerSeq STARFusion TCGA_RNA-Seq USP36-TIMP2 USP36 chr17 76834669 - TIMP2 chr17 76870001 - Exonic hg19 BRCA TCGA-A7-A13D-01A 3 16 5'UTR-CDS Intra-chr q25.3 q25.3 18494 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-MIEN1 FBXL20 chr17 37557614 - MIEN1 chr17 37886544 - Exonic hg19 BRCA TCGA-A7-A13D-01A 4 11 Out-of-frame Intra-chr q12 q12 Seq+ 18495 ChimerSeq STARFusion TCGA_RNA-Seq STK24-ATF7 STK24 chr13 99228999 - ATF7 chr12 53994805 - Exonic hg19 BRCA TCGA-A7-A13D-01A 6 3 CDS-5'UTR Inter-chr q32.2 q13.13 Transcription factor Seq+ 18496 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-IFI6 WASF2 chr1 27816497 - IFI6 chr1 27995857 - Exonic hg19 BRCA TCGA-A7-A13D-01A 4 11 5'UTR-5'UTR Intra-chr p36.11 p35.3 Seq+ 18497 ChimerSeq STARFusion TCGA_RNA-Seq PSMD12-PITPNC1 PSMD12 chr17 65362528 - PITPNC1 chr17 65528918 + Exonic hg19 BRCA TCGA-A7-A13D-01A 5 6 In-Frame Intra-chr q24.2 q24.2 Seq+ 18498 ChimerSeq STARFusion TCGA_RNA-Seq ABCB9-EIF2B1 ABCB9 chr12 123428938 - EIF2B1 chr12 124107308 - Exonic hg19 BRCA TCGA-A7-A13D-01A 3 13 In-Frame Intra-chr q24.31 q24.31 Seq+ 18499 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC7-LOC100507412 DNAJC7 chr17 40141422 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-A7-A13D-01A 3 12 CDS-5'UTR Inter-chr q21.2 18500 ChimerSeq STARFusion TCGA_RNA-Seq RFT1-DCP1A RFT1 chr3 53137969 - DCP1A chr3 53353500 - Exonic hg19 BRCA TCGA-A7-A13D-01A 4 7 In-Frame Intra-chr p21.1 p21.1 Seq+ 18501 ChimerSeq STARFusion TCGA_RNA-Seq FAM219A-PAX5 FAM219A chr9 34458202 - PAX5 chr9 36923481 - Exonic hg19 BRCA TCGA-A7-A13D-01A 4 5 In-Frame Intra-chr p13.3 p13.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 18502 ChimerSeq STARFusion TCGA_RNA-Seq ESPNP-NECAP2 ESPNP chr1 17023274 - NECAP2 chr1 16782313 + Exonic hg19 BRCA TCGA-A7-A13D-01A 2 12 3'UTR-CDS Intra-chr p36.13 p36.13 Seq+ 18503 ChimerSeq STARFusion TCGA_RNA-Seq ACTN1-DCAF5 ACTN1 chr14 69369194 - DCAF5 chr14 69542128 - Exonic hg19 BRCA TCGA-A7-A13D-01A 2 11 In-Frame Intra-chr q24.1 q24.1 Seq+ 18504 ChimerSeq STARFusion TCGA_RNA-Seq NEBL-FBXO11 NEBL chr10 21169723 - FBXO11 chr2 48066908 - Exonic hg19 BRCA TCGA-A7-A13D-01A 3 6 Out-of-frame Inter-chr p12.31 p16.3 Seq+ 18505 ChimerSeq STARFusion TCGA_RNA-Seq CELSR2-KIAA1324 CELSR2 chr1 109816292 + KIAA1324 chr1 109704516 + Exonic hg19 BRCA TCGA-A7-A13D-01A 3 5 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 18506 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHO2-ZNF609 PLEKHO2 chr15 65140941 + ZNF609 chr15 64915026 + Exonic hg19 BRCA TCGA-A7-A13D-01A 3 4 In-Frame Intra-chr q22.31 q22.31 Transcription factor Seq+ 18507 ChimerSeq STARFusion TCGA_RNA-Seq SPAG5-FAM222B SPAG5 chr17 26918716 - FAM222B chr17 27093725 - Exonic hg19 BRCA TCGA-A7-A13D-01A 3 4 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 18508 ChimerSeq STARFusion TCGA_RNA-Seq SPAG5-FAM222B SPAG5 chr17 26918716 - FAM222B chr17 27161344 - Exonic hg19 BRCA TCGA-A7-A13D-01A 3 4 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 18509 ChimerSeq STARFusion TCGA_RNA-Seq MACROD1-TRPT1 MACROD1 chr11 63918711 - TRPT1 chr11 63991813 - Exonic hg19 BRCA TCGA-A7-A13D-01A 2 7 In-Frame Intra-chr q13.1 q13.1 Seq+ 18510 ChimerSeq STARFusion TCGA_RNA-Seq MND1-ARFIP1 MND1 chr4 154279774 + ARFIP1 chr4 153784758 + Exonic hg19 BRCA TCGA-A7-A13D-01A 2 7 In-Frame Intra-chr q31.3 q31.3 Seq+ 18511 ChimerSeq STARFusion TCGA_RNA-Seq RAB5C-FAM134C RAB5C chr17 40306911 - FAM134C chr17 40737280 - Exonic hg19 BRCA TCGA-A7-A13D-01A 2 6 5'UTR-CDS Intra-chr q21.2 Seq+ 18512 ChimerSeq STARFusion TCGA_RNA-Seq SHC1-LOC100505666 SHC1 chr1 154941854 - LOC100505666 chr1 155021837 - Exonic hg19 BRCA TCGA-A7-A13D-01A 2 4 CDS-3'UTR Intra-chr q21.3 18513 ChimerSeq STARFusion TCGA_RNA-Seq METAP2-VEZT METAP2 chr12 95868106 + VEZT chr12 95663827 + Exonic hg19 BRCA TCGA-A7-A13D-01A 2 3 Out-of-frame Intra-chr q22 q22 Tumor suppressor gene Seq+ 18514 ChimerSeq STARFusion TCGA_RNA-Seq TAF4-LAMA5 TAF4 chr20 60639507 - LAMA5 chr20 60913206 - Exonic hg19 BRCA TCGA-A7-A13D-01A 2 3 In-Frame Intra-chr q13.33 Seq+ 18515 ChimerSeq STARFusion TCGA_RNA-Seq GANAB-ZNF76 GANAB chr11 62400037 - ZNF76 chr6 35248833 + Exonic hg19 BRCA TCGA-A7-A13D-01A 2 2 CDS-5'UTR Inter-chr q12.3 Tumor suppressor gene p21.31 Transcription factor Seq+ 18516 ChimerSeq STARFusion TCGA_RNA-Seq PITPNC1-PSMD12 PITPNC1 chr17 65374318 + PSMD12 chr17 65353694 - Exonic hg19 BRCA TCGA-A7-A13D-01A 2 2 In-Frame Intra-chr q24.2 q24.2 18517 ChimerSeq STARFusion TCGA_RNA-Seq STX12-WDTC1 STX12 chr1 28146243 + WDTC1 chr1 27587447 + Exonic hg19 BRCA TCGA-A7-A13D-01A 2 2 CDS-5'UTR Intra-chr p35.3 p36.11 Seq+ 18518 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-CLSPN NIPBL chr5 36877280 + CLSPN chr1 36230927 - Exonic hg19 BRCA TCGA-A7-A13D-01A 2 1 5'UTR-CDS Inter-chr p13.2 p34.3 Seq+ 18519 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A42-UPF1 SLC25A42 chr19 19174924 + UPF1 chr19 18972819 + Exonic hg19 BRCA TCGA-A7-A13D-01A 2 0 5'UTR-CDS Intra-chr p13.11 p13.11 18520 ChimerSeq STARFusion TCGA_RNA-Seq TMEM241-TEX101 TMEM241 chr18 20936558 - TEX101 chr19 43906918 + Exonic hg19 BRCA TCGA-A7-A13D-01A 2 0 CDS-5'UTR Inter-chr q11.2 q13.31 18521 ChimerSeq STARFusion TCGA_RNA-Seq RFWD2-KIF14 RFWD2 chr1 176118142 - KIF14 chr1 200578056 - Exonic hg19 BRCA TCGA-BH-A203-01A 3 251 In-Frame Intra-chr q25.2 Tumor suppressor gene q32.1 Seq+ 18522 ChimerSeq STARFusion TCGA_RNA-Seq HDAC2-TRDN HDAC2 chr6 114292021 - TRDN chr6 123545276 - Exonic hg19 BRCA TCGA-BH-A203-01A 27 48 In-Frame Intra-chr q21 q22.31 Seq+ 18523 ChimerSeq STARFusion TCGA_RNA-Seq TACC2-CTBP2 TACC2 chr10 123997552 + CTBP2 chr10 126678267 - Exonic hg19 BRCA TCGA-BH-A203-01A 13 25 In-Frame Intra-chr q26.13 q26.13 18524 ChimerSeq STARFusion TCGA_RNA-Seq FIG4-WASF1 FIG4 chr6 110098263 + WASF1 chr6 110424760 - Exonic hg19 BRCA TCGA-BH-A203-01A 14 20 In-Frame Intra-chr q21 q21 Seq+ 18525 ChimerSeq STARFusion TCGA_RNA-Seq ARID4B-B3GALNT2 ARID4B chr1 235357328 - B3GALNT2 chr1 235613655 - Exonic hg19 BRCA TCGA-BH-A203-01A 8 42 Out-of-frame Intra-chr q42.3 Seq+ 18526 ChimerSeq STARFusion TCGA_RNA-Seq PLCB1-GPCPD1 PLCB1 chr20 8131018 + GPCPD1 chr20 5585086 - Exonic hg19 BRCA TCGA-BH-A203-01A 15 11 CDS-5'UTR Intra-chr p12.3 p12.3 Seq+ 18527 ChimerSeq STARFusion TCGA_RNA-Seq HDAC2-TRDN HDAC2 chr6 114292021 - TRDN chr6 123545273 - Exonic hg19 BRCA TCGA-BH-A203-01A 5 48 In-Frame Intra-chr q21 q22.31 Seq+ 18528 ChimerSeq STARFusion TCGA_RNA-Seq PDE4DIP-C1orf186 PDE4DIP chr1 144915445 - C1orf186 chr1 206239579 - Exonic hg19 BRCA TCGA-BH-A203-01A 6 38 In-Frame Intra-chr q21.2 Oncogene q32.1 Seq+ 18529 ChimerSeq STARFusion TCGA_RNA-Seq TIMM17A-RASSF5 TIMM17A chr1 201926702 + RASSF5 chr1 206711501 + Exonic hg19 BRCA TCGA-BH-A203-01A 8 25 In-Frame Intra-chr q32.1 q32.1 Tumor suppressor gene Seq+ 18530 ChimerSeq STARFusion TCGA_RNA-Seq ADSS-SERTAD4 ADSS chr1 244583472 - SERTAD4 chr1 210411289 + Exonic hg19 BRCA TCGA-BH-A203-01A 4 33 5'UTR-5'UTR Intra-chr q44 Seq+ 18531 ChimerSeq STARFusion TCGA_RNA-Seq TRPS1-PDE4DIP TRPS1 chr8 116599228 - PDE4DIP chr1 144915639 - Exonic hg19 BRCA TCGA-BH-A203-01A 7 13 In-Frame Inter-chr q23.3 Transcription factor q21.2 Oncogene Seq+ 18532 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KC1-C1orf101 RPS6KC1 chr1 213277911 + C1orf101 chr1 244715624 + Exonic hg19 BRCA TCGA-BH-A203-01A 3 27 Out-of-frame Intra-chr q32.3 Seq+ 18533 ChimerSeq STARFusion TCGA_RNA-Seq LGALS8-EDARADD LGALS8 chr1 236681584 + EDARADD chr1 236645567 + Exonic hg19 BRCA TCGA-BH-A203-01A 7 8 5'UTR-CDS Intra-chr q43 q42.3 Seq+ 18534 ChimerSeq STARFusion TCGA_RNA-Seq FAM172A-FLJ42709 FAM172A chr5 93111865 - FLJ42709 chr5 92747215 - Exonic hg19 BRCA TCGA-BH-A203-01A 5 5 3'UTR-3'UTR Intra-chr q15 Tumor suppressor gene Seq+ 18535 ChimerSeq STARFusion TCGA_RNA-Seq MRPS21-CA14 MRPS21 chr1 150266869 + CA14 chr1 150236993 + Exonic hg19 BRCA TCGA-BH-A203-01A 3 6 In-Frame Intra-chr q21.2 q21.2 Seq+ 18536 ChimerSeq STARFusion TCGA_RNA-Seq FAM172A-FLJ42709 FAM172A chr5 93111865 - FLJ42709 chr5 92774447 - Exonic hg19 BRCA TCGA-BH-A203-01A 2 5 3'UTR-3'UTR Intra-chr q15 Tumor suppressor gene Seq+ 18537 ChimerSeq STARFusion TCGA_RNA-Seq NCOA2-NCALD NCOA2 chr8 71126138 - NCALD chr8 102731876 - Exonic hg19 BRCA TCGA-BH-A203-01A 2 2 CDS-5'UTR Intra-chr q13.3 Oncogene Transcription factor q22.3 Seq+ 18538 ChimerSeq STARFusion TCGA_RNA-Seq HOOK3-RNF170 HOOK3 chr8 42761401 + RNF170 chr8 42743014 - Exonic hg19 BRCA TCGA-A8-A081-01A 6 10 CDS-5'UTR Intra-chr p11.21 Oncogene p11.21 18539 ChimerSeq STARFusion TCGA_RNA-Seq ERLIN2-ADRB3 ERLIN2 chr8 37611228 + ADRB3 chr8 37823740 - Exonic hg19 BRCA TCGA-A8-A081-01A 3 20 Out-of-frame Intra-chr p11.23 p11.23 Seq+ 18540 ChimerSeq STARFusion TCGA_RNA-Seq CHD9-KSR1 CHD9 chr16 53088989 + KSR1 chr17 25877594 + Exonic hg19 BRCA TCGA-A8-A081-01A 2 4 5'UTR-5'UTR Inter-chr q12.2 q11.2 TKL:RAF Seq+ 18541 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-CCDC170 KDM2A chr11 66888829 + CCDC170 chr6 151936578 + Exonic hg19 BRCA TCGA-A8-A081-01A 2 4 In-Frame Inter-chr q13.2 Transcription factor q25.1 Seq+ 18542 ChimerSeq STARFusion TCGA_RNA-Seq ANXA6-ABI1 ANXA6 chr5 150483131 - ABI1 chr10 27112234 - Exonic hg19 BRCA TCGA-A8-A081-01A 2 0 In-Frame Inter-chr q33.1 p12.1 18543 ChimerSeq STARFusion TCGA_RNA-Seq CBFA2T2-NCOA6 CBFA2T2 chr20 32212823 + NCOA6 chr20 33370207 - Exonic hg19 BRCA TCGA-A8-A081-01A 2 0 CDS-5'UTR Intra-chr q11.21 q11.22 18544 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L-SMCHD1 DIS3L chr15 66621737 + SMCHD1 chr18 2694525 + Exonic hg19 BRCA TCGA-A8-A081-01A 2 0 In-Frame Inter-chr q22.31 p11.32 Tumor suppressor gene 18545 ChimerSeq STARFusion TCGA_RNA-Seq MED13L-PRIM1 MED13L chr12 116675273 - PRIM1 chr12 57133147 - Exonic hg19 BRCA TCGA-AR-A1AV-01A 90 801 In-Frame Intra-chr q24.21 q13.3 Seq+ 18546 ChimerSeq STARFusion TCGA_RNA-Seq ANO1-OR4D10 ANO1 chr11 70009446 + OR4D10 chr11 59245135 + Exonic hg19 BRCA TCGA-AR-A1AV-01A 11 154 In-Frame Intra-chr q13.3 q12.1 Seq+ 18547 ChimerSeq STARFusion TCGA_RNA-Seq ANO1-OR4D10 ANO1 chr11 70009537 + OR4D10 chr11 59245014 + Exonic hg19 BRCA TCGA-AR-A1AV-01A 4 154 Out-of-frame Intra-chr q13.3 q12.1 Seq+ 18548 ChimerSeq STARFusion TCGA_RNA-Seq ARID2-ZNF641 ARID2 chr12 46125097 + ZNF641 chr12 48741898 - Exonic hg19 BRCA TCGA-AR-A1AV-01A 3 27 In-Frame Intra-chr q12 Oncogene Tumor suppressor gene Transcription factor q13.11 Transcription factor Seq+ 18549 ChimerSeq STARFusion TCGA_RNA-Seq C2CD3-RNF169 C2CD3 chr11 73879389 - RNF169 chr11 74500671 + Exonic hg19 BRCA TCGA-AR-A1AV-01A 4 9 In-Frame Intra-chr q13.4 q13.4 Seq+ 18550 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1467-EMP1 KIAA1467 chr12 13232943 + EMP1 chr12 13364403 + Exonic hg19 BRCA TCGA-AR-A1AV-01A 2 8 CDS-5'UTR Intra-chr p13.1 Tumor suppressor gene 18551 ChimerSeq STARFusion TCGA_RNA-Seq CDK13-CLDN12 CDK13 chr7 40102699 + CLDN12 chr7 90034833 + Exonic hg19 BRCA TCGA-A2-A0CO-01A 2 1 CDS-5'UTR Intra-chr p14.1 q21.13 Seq+ 18552 ChimerSeq STARFusion TCGA_RNA-Seq ZNF253-LINC00466 ZNF253 chr19 19976808 + LINC00466 chr1 63628353 - Exonic hg19 BRCA TCGA-A2-A0EU-01A 2 5 CDS-3'UTR Inter-chr p13.11 Transcription factor p31.3 Seq+ 18553 ChimerSeq STARFusion TCGA_RNA-Seq ERI2-MYO1D ERI2 chr16 20810585 - MYO1D chr17 30965853 - Exonic hg19 BRCA TCGA-A2-A0EU-01A 2 0 In-Frame Inter-chr p12.3 q11.2 18554 ChimerSeq STARFusion TCGA_RNA-Seq LTBP1-BIRC6 LTBP1 chr2 33246273 + BIRC6 chr2 32631567 + Exonic hg19 BRCA TCGA-AR-A24N-01A 5 51 In-Frame Intra-chr p22.3 p22.3 Seq+ 18555 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-LETM2 WHSC1L1 chr8 38239317 - LETM2 chr8 38251701 + Exonic hg19 BRCA TCGA-A7-A3IZ-01A 22 89 5'UTR-5'UTR Intra-chr p11.23 Tumor suppressor gene p11.23 Seq+ 18556 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-LETM2 WHSC1L1 chr8 38239317 - LETM2 chr8 38251616 + Exonic hg19 BRCA TCGA-A7-A3IZ-01A 3 89 5'UTR-CDS Intra-chr p11.23 Tumor suppressor gene p11.23 Seq+ 18557 ChimerSeq STARFusion TCGA_RNA-Seq TBX3-BIK TBX3 chr12 115120617 - BIK chr22 43520022 + Exonic hg19 BRCA TCGA-A7-A3IZ-01A 4 11 CDS-5'UTR Inter-chr q24.21 Transcription factor q13.2 Tumor suppressor gene Seq+ 18558 ChimerSeq STARFusion TCGA_RNA-Seq FNTA-OVOL1 FNTA chr8 42911689 + OVOL1 chr11 65561502 + Exonic hg19 BRCA TCGA-A7-A3IZ-01A 3 4 Out-of-frame Inter-chr p11.21 q13.1 Transcription factor Seq+ 18559 ChimerSeq STARFusion TCGA_RNA-Seq COG5-DNAH7 COG5 chr7 106964885 - DNAH7 chr2 196651895 - Exonic hg19 BRCA TCGA-A7-A3IZ-01A 2 7 Out-of-frame Inter-chr q32.3 Seq+ 18560 ChimerSeq STARFusion TCGA_RNA-Seq EPHA7-PTPRK EPHA7 chr6 94066435 - PTPRK chr6 128718833 - Exonic hg19 BRCA TCGA-A7-A3IZ-01A 2 1 In-Frame Intra-chr q16.1 Oncogene Tumor suppressor gene 18561 ChimerSeq STARFusion TCGA_RNA-Seq RNF19A-COX6C RNF19A chr8 101322095 - COX6C chr8 100904280 - Exonic hg19 BRCA TCGA-AN-A0XV-01A 6 1155 5'UTR-5'UTR Intra-chr q22.2 q22.2 Seq+ 18562 ChimerSeq STARFusion TCGA_RNA-Seq RNF19A-COX6C RNF19A chr8 101322095 - COX6C chr8 100911437 - Exonic hg19 BRCA TCGA-AN-A0XV-01A 4 1066 5'UTR-5'UTR Intra-chr q22.2 q22.2 Seq+ 18563 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A32-LAPTM4B SLC25A32 chr8 104427012 - LAPTM4B chr8 98863625 + Exonic hg19 BRCA TCGA-AN-A0XV-01A 33 115 Out-of-frame Intra-chr q22.3 q22.1 Seq+ 18564 ChimerSeq STARFusion TCGA_RNA-Seq RNF19A-COX6CP1 RNF19A chr8 101322095 - COX6CP1 chr16 11998025 - Exonic hg19 BRCA TCGA-AN-A0XV-01A 26 2 Out-of-frame Inter-chr q22.2 p13.13 18565 ChimerSeq STARFusion TCGA_RNA-Seq PDE7A-NKAIN3 PDE7A chr8 66753606 - NKAIN3 chr8 63492098 + Exonic hg19 BRCA TCGA-AN-A0XV-01A 4 41 In-Frame Intra-chr q13.1 q12.3 Seq+ 18566 ChimerSeq STARFusion TCGA_RNA-Seq IL6R-ARHGEF2 IL6R chr1 154427057 + ARHGEF2 chr1 155917806 - Exonic hg19 BRCA TCGA-AN-A0XV-01A 4 4 Out-of-frame Intra-chr q21.3 q22 18567 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-LOC100134259 PTK2 chr8 142011224 - LOC100134259 chr2 47083062 + Exonic hg19 BRCA TCGA-A8-A06X-01A 11 19 5'UTR-5'UTR Inter-chr q24.3 18568 ChimerSeq STARFusion TCGA_RNA-Seq HTATSF1-BRS3 HTATSF1 chrX 135586622 + BRS3 chrX 135572292 + Exonic hg19 BRCA TCGA-A8-A06X-01A 5 35 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 18569 ChimerSeq STARFusion TCGA_RNA-Seq MLL3-PRKAG2 MLL3 chr7 151960101 - PRKAG2 chr7 151273538 - Exonic hg19 BRCA TCGA-A8-A06X-01A 6 30 In-Frame Intra-chr Tumor suppressor gene q36.1 Seq+ 18570 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-LOC388948 PTK2 chr8 142011224 - LOC388948 chr2 47049240 + Exonic hg19 BRCA TCGA-A8-A06X-01A 5 9 5'UTR-5'UTR Inter-chr q24.3 18571 ChimerSeq STARFusion TCGA_RNA-Seq OAS3-RPH3A OAS3 chr12 113403834 + RPH3A chr12 113325602 + Exonic hg19 BRCA TCGA-A8-A06X-01A 3 8 Out-of-frame Intra-chr q24.13 q24.13 Seq+ 18572 ChimerSeq STARFusion TCGA_RNA-Seq CRLS1-SEL1L2 CRLS1 chr20 5990558 + SEL1L2 chr20 13899769 - Exonic hg19 BRCA TCGA-A8-A06X-01A 2 2 Out-of-frame Intra-chr p12.3 p12.1 Seq+ 18573 ChimerSeq STARFusion TCGA_RNA-Seq BEX4-NGFRAP1 BEX4 chrX 102470701 + NGFRAP1 chrX 102632389 + Exonic hg19 BRCA TCGA-GM-A2D9-01A 20 0 Out-of-frame Intra-chr q22.1 18574 ChimerSeq STARFusion TCGA_RNA-Seq BEX4-NGFRAP1 BEX4 chrX 102470704 + NGFRAP1 chrX 102632439 + Exonic hg19 BRCA TCGA-GM-A2D9-01A 11 0 Out-of-frame Intra-chr q22.1 18575 ChimerSeq STARFusion TCGA_RNA-Seq MTL5-SART1 MTL5 chr11 68506168 - SART1 chr11 65746071 + Exonic hg19 BRCA TCGA-GM-A2D9-01A 3 3 Out-of-frame Intra-chr q13.1 Seq+ 18576 ChimerSeq STARFusion TCGA_RNA-Seq PPM1H-SLC6A15 PPM1H chr12 63131282 - SLC6A15 chr12 85264449 - Exonic hg19 BRCA TCGA-A8-A0A9-01A 52 92 In-Frame Intra-chr q14.2 q21.31 Seq+ 18577 ChimerSeq STARFusion TCGA_RNA-Seq SRGAP1-GAB2 SRGAP1 chr12 64480806 + GAB2 chr11 77991947 - Exonic hg19 BRCA TCGA-A8-A0A9-01A 15 110 Out-of-frame Inter-chr q14.2 q14.1 Seq+ 18578 ChimerSeq STARFusion TCGA_RNA-Seq SRGAP1-GAB2 SRGAP1 chr12 64474150 + GAB2 chr11 77991947 - Exonic hg19 BRCA TCGA-A8-A0A9-01A 4 110 Out-of-frame Inter-chr q14.2 q14.1 Seq+ 18579 ChimerSeq STARFusion TCGA_RNA-Seq RNF121-PPP6R3 RNF121 chr11 71701763 + PPP6R3 chr11 68331771 + Exonic hg19 BRCA TCGA-A8-A0A9-01A 18 39 Out-of-frame Intra-chr q13.4 q13.2 Seq+ 18580 ChimerSeq STARFusion TCGA_RNA-Seq ARRB1-RASSF3 ARRB1 chr11 74992119 - RASSF3 chr12 65078567 + Exonic hg19 BRCA TCGA-A8-A0A9-01A 5 10 Out-of-frame Inter-chr q13.4 q14.2 Tumor suppressor gene Seq+ 18581 ChimerSeq STARFusion TCGA_RNA-Seq SNAP23-RGAG1 SNAP23 chr15 42787911 + RGAG1 chrX 109688351 + Exonic hg19 BRCA TCGA-A8-A0A9-01A 4 4 5'UTR-5'UTR Inter-chr q15.1 Seq+ 18582 ChimerSeq STARFusion TCGA_RNA-Seq NEBL-TADA2A NEBL chr10 21250601 - TADA2A chr17 35797839 + Exonic hg19 BRCA TCGA-AC-A3BB-01A 2 1 In-Frame Inter-chr p12.31 q12 18583 ChimerSeq STARFusion TCGA_RNA-Seq DNASE2-TRMT1 DNASE2 chr19 12989196 - TRMT1 chr19 13216210 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 16 82 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 18584 ChimerSeq STARFusion TCGA_RNA-Seq DNASE2-TRMT1 DNASE2 chr19 12987051 - TRMT1 chr19 13216270 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 6 82 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 18585 ChimerSeq STARFusion TCGA_RNA-Seq LAMA5-RBBP8NL LAMA5 chr20 60905544 - RBBP8NL chr20 60992375 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 5 40 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 18586 ChimerSeq STARFusion TCGA_RNA-Seq LAMA5-RBBP8NL LAMA5 chr20 60905544 - RBBP8NL chr20 60993521 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 3 40 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 18587 ChimerSeq STARFusion TCGA_RNA-Seq RAI1-SPNS2 RAI1 chr17 17707163 + SPNS2 chr17 4428352 + Exonic hg19 BRCA TCGA-AC-A8OQ-01A 6 26 In-Frame Intra-chr p11.2 p13.2 Seq+ 18588 ChimerSeq STARFusion TCGA_RNA-Seq DGUOK-C2orf78 DGUOK chr2 74154179 + C2orf78 chr2 74040604 + Exonic hg19 BRCA TCGA-AC-A8OQ-01A 6 15 In-Frame Intra-chr p13.1 p13.1 Seq+ 18589 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-ELK2AP GAS6 chr13 114525072 - ELK2AP chr14 106136184 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 9 0 Out-of-frame Inter-chr q34 Oncogene 18590 ChimerSeq STARFusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23739998 - APOO chrX 23899069 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 4 15 In-Frame Intra-chr p22.11 p22.11 Seq+ 18591 ChimerSeq STARFusion TCGA_RNA-Seq FAM208B-ABI1 FAM208B chr10 5727138 + ABI1 chr10 27112234 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 4 14 5'UTR-CDS Intra-chr p15.1 p12.1 18592 ChimerSeq STARFusion TCGA_RNA-Seq ABHD2-ACAN ABHD2 chr15 89698765 + ACAN chr15 89398083 + Exonic hg19 BRCA TCGA-AC-A8OQ-01A 5 3 In-Frame Intra-chr q26.1 q26.1 Seq+ 18593 ChimerSeq STARFusion TCGA_RNA-Seq XPO1-USP34 XPO1 chr2 61749746 - USP34 chr2 61448741 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 4 6 Out-of-frame Intra-chr p15 Oncogene p15 Seq+ 18594 ChimerSeq STARFusion TCGA_RNA-Seq UBTD2-FBXW11 UBTD2 chr5 171710600 - FBXW11 chr5 171341409 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 3 8 Out-of-frame Intra-chr q35.1 q35.1 Seq+ 18595 ChimerSeq STARFusion TCGA_RNA-Seq GMEB2-STMN3 GMEB2 chr20 62223375 - STMN3 chr20 62275662 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 3 5 In-Frame Intra-chr q13.33 Transcription factor q13.33 Seq+ 18596 ChimerSeq STARFusion TCGA_RNA-Seq PTPRZ1-UBE2H PTPRZ1 chr7 121668697 + UBE2H chr7 129479175 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 3 5 In-Frame Intra-chr q31.32 q32.2 Seq+ 18597 ChimerSeq STARFusion TCGA_RNA-Seq UBTD2-FBXW11 UBTD2 chr5 171710600 - FBXW11 chr5 171384702 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 2 8 Out-of-frame Intra-chr q35.1 q35.1 Seq+ 18598 ChimerSeq STARFusion TCGA_RNA-Seq CLIC4-NCMAP CLIC4 chr1 25072116 + NCMAP chr1 24921915 + Exonic hg19 BRCA TCGA-AC-A8OQ-01A 3 2 Out-of-frame Intra-chr p36.11 p36.11 18599 ChimerSeq STARFusion TCGA_RNA-Seq XPO1-USP34 XPO1 chr2 61749746 - USP34 chr2 61449798 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 2 6 Out-of-frame Intra-chr p15 Oncogene p15 Seq+ 18600 ChimerSeq STARFusion TCGA_RNA-Seq ACSL3-MOGAT1 ACSL3 chr2 223725976 + MOGAT1 chr2 223553063 + Exonic hg19 BRCA TCGA-AC-A8OQ-01A 2 4 5'UTR-CDS Intra-chr q36.1 q36.1 Seq+ 18601 ChimerSeq STARFusion TCGA_RNA-Seq SNX27-SCNM1 SNX27 chr1 151611595 + SCNM1 chr1 151141462 + Exonic hg19 BRCA TCGA-AC-A8OQ-01A 2 2 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 18602 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 BRCA TCGA-AC-A8OQ-01A 2 0 In-Frame Intra-chr p11.21 p11.21 18603 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1467-EMP1 KIAA1467 chr12 13229077 + EMP1 chr12 13364403 + Exonic hg19 BRCA TCGA-C8-A274-01A 5 16 CDS-5'UTR Intra-chr p13.1 Tumor suppressor gene 18604 ChimerSeq STARFusion TCGA_RNA-Seq IGFBP5-GAK IGFBP5 chr2 217543575 - GAK chr4 860759 - Exonic hg19 BRCA TCGA-C8-A274-01A 5 1 Out-of-frame Inter-chr q35 Tumor suppressor gene p16.3 Other:NAK 18605 ChimerSeq STARFusion TCGA_RNA-Seq NBEAL2-TMC2 NBEAL2 chr3 47021402 + TMC2 chr20 2559792 + Exonic hg19 BRCA TCGA-C8-A274-01A 3 7 In-Frame Inter-chr p21.31 p13 Seq+ 18606 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-CDK12 ERBB2 chr17 37868701 + CDK12 chr17 37680927 + Exonic hg19 BRCA TCGA-BH-A204-01A 64 243 In-Frame Intra-chr q12 Oncogene q12 Oncogene Seq+ 18607 ChimerSeq STARFusion TCGA_RNA-Seq RNF122-NEGR1 RNF122 chr8 33424217 - NEGR1 chr1 71873253 - Exonic hg19 BRCA TCGA-BH-A204-01A 7 63 In-Frame Inter-chr p12 p31.1 Seq+ 18608 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80963762 - MRPS28 chr8 80831383 - Exonic hg19 BRCA TCGA-BH-A204-01A 2 2 In-Frame Intra-chr q21.13 q21.13 18609 ChimerSeq STARFusion TCGA_RNA-Seq TSKU-ACER3 TSKU chr11 76494448 + ACER3 chr11 76637601 + Exonic hg19 BRCA TCGA-BH-A204-01A 2 0 5'UTR-CDS Intra-chr q13.5 q13.5 18610 ChimerSeq STARFusion TCGA_RNA-Seq NAPA-PPP5D1 NAPA chr19 48018100 - PPP5D1 chr19 46984697 - Exonic hg19 BRCA TCGA-E2-A9RU-01A 29 81 Out-of-frame Intra-chr q13.33 q13.32 Seq+ 18611 ChimerSeq STARFusion TCGA_RNA-Seq MON2-PIP4K2C MON2 chr12 62943610 + PIP4K2C chr12 57989671 + Exonic hg19 BRCA TCGA-E2-A9RU-01A 2 33 In-Frame Intra-chr q14.1 q13.3 Seq+ 18612 ChimerSeq STARFusion TCGA_RNA-Seq TAF6L-TMEM109 TAF6L chr11 62550297 + TMEM109 chr11 60688358 + Exonic hg19 BRCA TCGA-E2-A9RU-01A 5 21 In-Frame Intra-chr q12.3 q12.2 Seq+ 18613 ChimerSeq STARFusion TCGA_RNA-Seq ERC1-TACC3 ERC1 chr12 1192746 + TACC3 chr4 1741429 + Exonic hg19 BRCA TCGA-E2-A9RU-01A 7 12 In-Frame Inter-chr p16.3 Seq+ 18614 ChimerSeq STARFusion TCGA_RNA-Seq JARID2-BMP6 JARID2 chr6 15410596 + BMP6 chr6 7879307 + Exonic hg19 BRCA TCGA-E2-A9RU-01A 6 10 Out-of-frame Intra-chr p22.3 p24.3 Seq+ 18615 ChimerSeq STARFusion TCGA_RNA-Seq PREP-QRSL1 PREP chr6 105845728 - QRSL1 chr6 107088224 + Exonic hg19 BRCA TCGA-E2-A9RU-01A 7 0 In-Frame Intra-chr q21 q21 Seq+ 18616 ChimerSeq STARFusion TCGA_RNA-Seq MTA2-CDHR5 MTA2 chr11 62362736 - CDHR5 chr11 618111 - Exonic hg19 BRCA TCGA-E2-A9RU-01A 2 19 In-Frame Intra-chr q12.3 Seq+ 18617 ChimerSeq STARFusion TCGA_RNA-Seq JARID2-BMP6 JARID2 chr6 15246815 + BMP6 chr6 7879307 + Exonic hg19 BRCA TCGA-E2-A9RU-01A 2 10 Out-of-frame Intra-chr p22.3 p24.3 Seq+ 18618 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R2A-LGI3 PPP2R2A chr8 26212149 + LGI3 chr8 22009513 - Exonic hg19 BRCA TCGA-E2-A9RU-01A 2 7 Out-of-frame Intra-chr p21.2 p21.3 Seq+ 18619 ChimerSeq STARFusion TCGA_RNA-Seq PXDNL-ATP6V1H PXDNL chr8 52721741 - ATP6V1H chr8 54669216 - Exonic hg19 BRCA TCGA-E2-A9RU-01A 2 6 In-Frame Intra-chr q11.23 q11.23 Seq+ 18620 ChimerSeq STARFusion TCGA_RNA-Seq DOCK5-PNOC DOCK5 chr8 25042466 + PNOC chr8 28186652 + Exonic hg19 BRCA TCGA-E2-A9RU-01A 3 1 CDS-5'UTR Intra-chr p21.2 p21.1 18621 ChimerSeq STARFusion TCGA_RNA-Seq ZZEF1-SPATA22 ZZEF1 chr17 4005611 - SPATA22 chr17 3372692 - Exonic hg19 BRCA TCGA-E2-A9RU-01A 2 4 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 18622 ChimerSeq STARFusion TCGA_RNA-Seq GALNT2-LACE1 GALNT2 chr1 230203153 + LACE1 chr6 108840900 + Exonic hg19 BRCA TCGA-E2-A9RU-01A 2 2 In-Frame Inter-chr q42.13 Seq+ 18623 ChimerSeq STARFusion TCGA_RNA-Seq GALNT2-LACE1 GALNT2 chr1 230203153 + LACE1 chr6 108831415 + Exonic hg19 BRCA TCGA-E2-A9RU-01A 2 2 In-Frame Inter-chr q42.13 Seq+ 18624 ChimerSeq STARFusion TCGA_RNA-Seq RBM42-CPQ RBM42 chr19 36120575 + CPQ chr8 98155248 + Exonic hg19 BRCA TCGA-E2-A9RU-01A 2 2 Out-of-frame Inter-chr q13.12 q22.1 18625 ChimerSeq STARFusion TCGA_RNA-Seq P4HA1-C10orf11 P4HA1 chr10 74856524 - C10orf11 chr10 78316967 + Exonic hg19 BRCA TCGA-A2-A0YH-01A 2 2 5'UTR-CDS Intra-chr q22.1 Seq+ 18626 ChimerSeq STARFusion TCGA_RNA-Seq GPR89A-RNF115 GPR89A chr1 145826888 - RNF115 chr1 145646115 + Exonic hg19 BRCA TCGA-AR-A1AR-01A 18 64 In-Frame Intra-chr q21.1 q21.1 Seq+ 18627 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-TRAP1 CREBBP chr16 3929833 - TRAP1 chr16 3740986 - Exonic hg19 BRCA TCGA-AR-A1AR-01A 19 33 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 18628 ChimerSeq STARFusion TCGA_RNA-Seq C6orf62-KIAA0319 C6orf62 chr6 24709005 - KIAA0319 chr6 24601436 - Exonic hg19 BRCA TCGA-AR-A1AR-01A 12 44 CDS-5'UTR Intra-chr p22.3 p22.3 Seq+ 18629 ChimerSeq STARFusion TCGA_RNA-Seq C6orf62-KIAA0319 C6orf62 chr6 24709005 - KIAA0319 chr6 24596846 - Exonic hg19 BRCA TCGA-AR-A1AR-01A 2 44 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 18630 ChimerSeq STARFusion TCGA_RNA-Seq GPR89B-RNF115 GPR89B chr1 147400691 + RNF115 chr1 145646115 + Exonic hg19 BRCA TCGA-AR-A1AR-01A 7 6 In-Frame Intra-chr q21.2 q21.1 18631 ChimerSeq STARFusion TCGA_RNA-Seq FUBP1-SLC44A5 FUBP1 chr1 78444569 - SLC44A5 chr1 75766370 - Exonic hg19 BRCA TCGA-AR-A1AR-01A 4 8 Out-of-frame Intra-chr p31.1 Oncogene p31.1 Seq+ 18632 ChimerSeq STARFusion TCGA_RNA-Seq USP20-GPR107 USP20 chr9 132597778 + GPR107 chr9 132887194 + Exonic hg19 BRCA TCGA-AR-A1AR-01A 5 0 5'UTR-CDS Intra-chr q34.11 q34.11 18633 ChimerSeq STARFusion TCGA_RNA-Seq PLCZ1-PTHLH PLCZ1 chr12 18847844 - PTHLH chr12 28111501 - Exonic hg19 BRCA TCGA-AR-A1AR-01A 3 2 Out-of-frame Intra-chr p12.3 p11.22 Seq+ 18634 ChimerSeq STARFusion TCGA_RNA-Seq KAT6A-ADAM2 KAT6A chr8 41812814 - ADAM2 chr8 39694731 - Exonic hg19 BRCA TCGA-AR-A1AR-01A 2 4 Out-of-frame Intra-chr p11.21 Oncogene Seq+ 18635 ChimerSeq STARFusion TCGA_RNA-Seq AIDA-MIA3 AIDA chr1 222867131 - MIA3 chr1 222822171 + Exonic hg19 BRCA TCGA-AR-A1AR-01A 2 1 Out-of-frame Intra-chr q41 q41 18636 ChimerSeq STARFusion TCGA_RNA-Seq SKP1-RUNX1 SKP1 chr5 133509617 - RUNX1 chr21 36171759 - Exonic hg19 BRCA TCGA-AR-A1AR-01A 2 0 In-Frame Inter-chr q31.1 q22.12 Oncogene Tumor suppressor gene Transcription factor 18637 ChimerSeq STARFusion TCGA_RNA-Seq SUSD1-UGCG SUSD1 chr9 114840818 - UGCG chr9 114676885 + Exonic hg19 BRCA TCGA-D8-A1XA-01A 14 83 Out-of-frame Intra-chr q32 q31.3 Seq+ 18638 ChimerSeq STARFusion TCGA_RNA-Seq SUSD1-UGCG SUSD1 chr9 114842354 - UGCG chr9 114676885 + Exonic hg19 BRCA TCGA-D8-A1XA-01A 4 83 Out-of-frame Intra-chr q32 q31.3 Seq+ 18639 ChimerSeq STARFusion TCGA_RNA-Seq FBXW11-FAM153B FBXW11 chr5 171433462 - FAM153B chr5 175516466 + Exonic hg19 BRCA TCGA-D8-A1XA-01A 2 11 Out-of-frame Intra-chr q35.1 q35.2 18640 ChimerSeq STARFusion TCGA_RNA-Seq PMM2-UBFD1 PMM2 chr16 8906963 + UBFD1 chr16 23573527 + Exonic hg19 BRCA TCGA-E9-A5FL-01A 5 54 In-Frame Intra-chr p13.2 p12.2 Seq+ 18641 ChimerSeq STARFusion TCGA_RNA-Seq STK3-POLR2K STK3 chr8 99837743 - POLR2K chr8 101163575 + Exonic hg19 BRCA TCGA-E9-A5FL-01A 4 9 CDS-5'UTR Intra-chr q22.2 q22.2 Seq+ 18642 ChimerSeq STARFusion TCGA_RNA-Seq CASP7-VTI1A CASP7 chr10 115457362 + VTI1A chr10 114286846 + Exonic hg19 BRCA TCGA-E9-A5FL-01A 2 4 Out-of-frame Intra-chr q25.3 q25.2 Seq+ 18643 ChimerSeq STARFusion TCGA_RNA-Seq MKL2-SHISA9 MKL2 chr16 14173211 + SHISA9 chr16 13297251 + Exonic hg19 BRCA TCGA-E9-A5FL-01A 2 2 5'UTR-CDS Intra-chr p13.12 p13.12 Seq+ 18644 ChimerSeq STARFusion TCGA_RNA-Seq NCOA6-DYNLRB1 NCOA6 chr20 33413275 - DYNLRB1 chr20 33114073 + Exonic hg19 BRCA TCGA-E9-A5FL-01A 2 1 5'UTR-CDS Intra-chr q11.22 q11.22 18645 ChimerSeq STARFusion TCGA_RNA-Seq KDM4B-C19orf44 KDM4B chr19 5016350 + C19orf44 chr19 16611603 + Exonic hg19 BRCA TCGA-A7-A13E-01A 20 37 5'UTR-5'UTR Intra-chr p13.3 p13.11 Seq+ 18646 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A3-PPAP2C SLC39A3 chr19 2737046 - PPAP2C chr19 288171 - Exonic hg19 BRCA TCGA-A7-A13E-01A 14 55 Out-of-frame Intra-chr p13.3 Seq+ 18647 ChimerSeq STARFusion TCGA_RNA-Seq DYNC1H1-RNA45S5 DYNC1H1 chr14 102452719 + RNA45S5 chrUn_gl000220 114052 + Exonic hg19 BRCA TCGA-A7-A13E-01A 3 33 Out-of-frame Inter-chr q32.31 18648 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R12A-MGAT4C PPP1R12A chr12 80239082 - MGAT4C chr12 86443501 - Exonic hg19 BRCA TCGA-A1-A0SE-01A 15 20 CDS-5'UTR Intra-chr q21.31 Seq+ 18649 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-OSBPL8 FRS2 chr12 69924740 + OSBPL8 chr12 76750508 - Exonic hg19 BRCA TCGA-BH-A1EV-01A 15 58 5'UTR-CDS Intra-chr q15 q21.2 Seq+ 18650 ChimerSeq STARFusion TCGA_RNA-Seq TMBIM4-INO80 TMBIM4 chr12 66563635 - INO80 chr15 41297885 - Exonic hg19 BRCA TCGA-BH-A1EV-01A 13 26 Out-of-frame Inter-chr q14.3 q15.1 Seq+ 18651 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-OSBPL8 FRS2 chr12 69924740 + OSBPL8 chr12 76749801 - Exonic hg19 BRCA TCGA-BH-A1EV-01A 2 58 5'UTR-CDS Intra-chr q15 q21.2 Seq+ 18652 ChimerSeq STARFusion TCGA_RNA-Seq USPL1-IGSF8 USPL1 chr13 31205611 + IGSF8 chr1 160063961 - Exonic hg19 BRCA TCGA-BH-A1EV-01A 7 22 In-Frame Inter-chr q12.3 q23.2 Seq+ 18653 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-UST SSH2 chr17 28256956 - UST chr6 149262415 + Exonic hg19 BRCA TCGA-BH-A1EV-01A 6 15 In-Frame Inter-chr q11.2 q25.1 Seq+ 18654 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-KIFAP3 GNB1 chr1 1735858 - KIFAP3 chr1 169993737 - Exonic hg19 BRCA TCGA-BH-A1EV-01A 2 27 In-Frame Intra-chr p36.33 q24.2 Seq+ 18655 ChimerSeq STARFusion TCGA_RNA-Seq KIRREL-RBP7 KIRREL chr1 157963518 + RBP7 chr1 10075840 + Exonic hg19 BRCA TCGA-BH-A1EV-01A 5 15 Out-of-frame Intra-chr q23.1 p36.22 Seq+ 18656 ChimerSeq STARFusion TCGA_RNA-Seq SGCD-RARA SGCD chr5 156022061 + RARA chr17 38504568 + Exonic hg19 BRCA TCGA-BH-A1EV-01A 4 18 In-Frame Inter-chr q33.2 q21.2 Oncogene Transcription factor Seq+ 18657 ChimerSeq STARFusion TCGA_RNA-Seq FCGR2A-SPTA1 FCGR2A chr1 161476381 + SPTA1 chr1 158632735 - Exonic hg19 BRCA TCGA-BH-A1EV-01A 6 8 Out-of-frame Intra-chr q23.3 q23.1 Seq+ 18658 ChimerSeq STARFusion TCGA_RNA-Seq ETNK1-PPFIBP1 ETNK1 chr12 22778520 + PPFIBP1 chr12 27798995 + Exonic hg19 BRCA TCGA-BH-A1EV-01A 4 15 In-Frame Intra-chr p12.1 p11.23 Seq+ 18659 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-BNC2 ESR1 chr6 152163922 + BNC2 chr9 16738483 - Exonic hg19 BRCA TCGA-BH-A1EV-01A 3 12 Out-of-frame Inter-chr q25.1 Oncogene Tumor suppressor gene Transcription factor p22.2 Transcription factor Seq+ 18660 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP23-NLK ARHGAP23 chr17 36638919 + NLK chr17 26490569 + Exonic hg19 BRCA TCGA-BH-A1EV-01A 5 3 Out-of-frame Intra-chr q12 q11.2 CMGC:MAPK Seq+ 18661 ChimerSeq STARFusion TCGA_RNA-Seq CISD3-KIFAP3 CISD3 chr17 36887692 + KIFAP3 chr1 170024577 - Exonic hg19 BRCA TCGA-BH-A1EV-01A 3 11 Out-of-frame Inter-chr q24.2 18662 ChimerSeq STARFusion TCGA_RNA-Seq SPTA1-GRIP1 SPTA1 chr1 158631077 - GRIP1 chr12 66923694 - Exonic hg19 BRCA TCGA-BH-A1EV-01A 3 11 In-Frame Inter-chr q23.1 q14.3 Seq+ 18663 ChimerSeq STARFusion TCGA_RNA-Seq COPA-CISD3 COPA chr1 160293221 - CISD3 chr17 36887013 + Exonic hg19 BRCA TCGA-BH-A1EV-01A 3 6 Out-of-frame Inter-chr q23.2 Seq+ 18664 ChimerSeq STARFusion TCGA_RNA-Seq CSMD2-IFI44L CSMD2 chr1 34052104 - IFI44L chr1 79102717 + Exonic hg19 BRCA TCGA-BH-A1EV-01A 2 5 Out-of-frame Intra-chr p35.1 p31.1 Seq+ 18665 ChimerSeq STARFusion TCGA_RNA-Seq RARA-TBC1D3H RARA chr17 38508759 + TBC1D3H chr17 34751022 - Exonic hg19 BRCA TCGA-BH-A1EV-01A 3 0 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q12 18666 ChimerSeq STARFusion TCGA_RNA-Seq TMEM106A-TUBD1 TMEM106A chr17 41369331 + TUBD1 chr17 57963591 - Exonic hg19 BRCA TCGA-BH-A1EV-01A 2 3 Out-of-frame Intra-chr q21.31 q23.1 Seq+ 18667 ChimerSeq STARFusion TCGA_RNA-Seq SF1-PGM3 SF1 chr11 64543970 - PGM3 chr6 83898517 - Exonic hg19 BRCA TCGA-BH-A1EV-01A 2 0 Out-of-frame Inter-chr q13.1 q14.1 18668 ChimerSeq STARFusion TCGA_RNA-Seq ZFP91-RAB6A ZFP91 chr11 58352357 + RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-A8-A093-01A 115 348 Out-of-frame Intra-chr q12.1 Transcription factor q13.4 Seq+ 18669 ChimerSeq STARFusion TCGA_RNA-Seq USP22-MYH10 USP22 chr17 20919065 - MYH10 chr17 8508300 - Exonic hg19 BRCA TCGA-A8-A093-01A 59 120 Out-of-frame Intra-chr p11.2 p13.1 Seq+ 18670 ChimerSeq STARFusion TCGA_RNA-Seq MRPL48-DTX4 MRPL48 chr11 73536841 + DTX4 chr11 58972149 + Exonic hg19 BRCA TCGA-A8-A093-01A 26 51 In-Frame Intra-chr q13.4 q12.1 Seq+ 18671 ChimerSeq STARFusion TCGA_RNA-Seq USP22-MYH10 USP22 chr17 20921255 - MYH10 chr17 8508300 - Exonic hg19 BRCA TCGA-A8-A093-01A 7 120 In-Frame Intra-chr p11.2 p13.1 Seq+ 18672 ChimerSeq STARFusion TCGA_RNA-Seq ERLIN2-RAB11FIP1 ERLIN2 chr8 37602214 + RAB11FIP1 chr8 37735069 - Exonic hg19 BRCA TCGA-E9-A1N9-01A 25 51 Out-of-frame Intra-chr p11.23 p11.23 Seq+ 18673 ChimerSeq STARFusion TCGA_RNA-Seq NEMF-CDKL1 NEMF chr14 50295009 - CDKL1 chr14 50808940 - Exonic hg19 BRCA TCGA-E9-A1N9-01A 20 16 In-Frame Intra-chr q21.3 q22.1 CMGC:CDKL Seq+ 18674 ChimerSeq STARFusion TCGA_RNA-Seq PIGN-CTNNA2 PIGN chr18 59763081 - CTNNA2 chr2 80874710 + Exonic hg19 BRCA TCGA-E9-A1N9-01A 7 35 Out-of-frame Inter-chr q21.33 p12 Tumor suppressor gene Seq+ 18675 ChimerSeq STARFusion TCGA_RNA-Seq TMEM52B-RHNO1 TMEM52B chr12 10339188 + RHNO1 chr12 2994449 + Exonic hg19 BRCA TCGA-E9-A1N9-01A 9 19 Out-of-frame Intra-chr p13.2 p13.33 Seq+ 18676 ChimerSeq STARFusion TCGA_RNA-Seq PIGN-CTNNA2 PIGN chr18 59768308 - CTNNA2 chr2 80874710 + Exonic hg19 BRCA TCGA-E9-A1N9-01A 4 35 Out-of-frame Inter-chr q21.33 p12 Tumor suppressor gene Seq+ 18677 ChimerSeq STARFusion TCGA_RNA-Seq NUP188-ASTN2 NUP188 chr9 131735528 + ASTN2 chr9 119382722 - Exonic hg19 BRCA TCGA-E9-A1N9-01A 6 20 In-Frame Intra-chr q34.11 q33.1 Seq+ 18678 ChimerSeq STARFusion TCGA_RNA-Seq ATAD2-ZNF252P ATAD2 chr8 124408427 - ZNF252P chr8 146203939 - Exonic hg19 BRCA TCGA-E9-A1N9-01A 4 6 CDS-3'UTR Intra-chr q24.13 q24.3 Seq+ 18679 ChimerSeq STARFusion TCGA_RNA-Seq AGL-UBE4B AGL chr1 100342153 + UBE4B chr1 10093280 + Exonic hg19 BRCA TCGA-E9-A1N9-01A 4 5 CDS-5'UTR Intra-chr p21.2 p36.22 Tumor suppressor gene Seq+ 18680 ChimerSeq STARFusion TCGA_RNA-Seq ADIPOR2-FAM72B ADIPOR2 chr12 1800357 + FAM72B chr1 120841975 + Exonic hg19 BRCA TCGA-E9-A1N9-01A 2 3 5'UTR-CDS Inter-chr p13.33 p11.2 Seq+ 18681 ChimerSeq STARFusion TCGA_RNA-Seq OCEL1-SMARCA4 OCEL1 chr19 17338008 + SMARCA4 chr19 11094797 + Exonic hg19 BRCA TCGA-E9-A1N9-01A 2 3 CDS-5'UTR Intra-chr p13.11 p13.2 Oncogene Tumor suppressor gene Seq+ 18682 ChimerSeq STARFusion TCGA_RNA-Seq LPCAT1-CLPTM1L LPCAT1 chr5 1523825 - CLPTM1L chr5 1331998 - Exonic hg19 BRCA TCGA-A7-A0CE-01A 23 37 In-Frame Intra-chr p15.33 Seq+ 18683 ChimerSeq STARFusion TCGA_RNA-Seq UBL3-MTIF3 UBL3 chr13 30423649 - MTIF3 chr13 28019293 - Exonic hg19 BRCA TCGA-A7-A0CE-01A 20 32 CDS-5'UTR Intra-chr q12.3 q12.2 Seq+ 18684 ChimerSeq STARFusion TCGA_RNA-Seq RNF121-CYSLTR2 RNF121 chr11 71671937 + CYSLTR2 chr13 49280953 + Exonic hg19 BRCA TCGA-A7-A0CE-01A 13 38 5'UTR-5'UTR Inter-chr q13.4 q14.2 Seq+ 18685 ChimerSeq STARFusion TCGA_RNA-Seq RNF121-CYSLTR2 RNF121 chr11 71673335 + CYSLTR2 chr13 49280953 + Exonic hg19 BRCA TCGA-A7-A0CE-01A 3 38 5'UTR-5'UTR Inter-chr q13.4 q14.2 Seq+ 18686 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-COX4I1 PUM1 chr1 31532051 - COX4I1 chr16 85834811 + Exonic hg19 BRCA TCGA-A7-A0CE-01A 2 0 CDS-5'UTR Inter-chr p35.2 q24.1 18687 ChimerSeq STARFusion TCGA_RNA-Seq SS18L1-CDH4 SS18L1 chr20 60718945 + CDH4 chr20 60469966 + Exonic hg19 BRCA TCGA-E2-A1LL-01A 48 191 In-Frame Intra-chr q13.33 q13.33 Tumor suppressor gene Seq+ 18688 ChimerSeq STARFusion TCGA_RNA-Seq C2CD5-ITPR2 C2CD5 chr12 22666228 - ITPR2 chr12 26493261 - Exonic hg19 BRCA TCGA-E2-A1LL-01A 26 67 Out-of-frame Intra-chr p12.1 p11.23 18689 ChimerSeq STARFusion TCGA_RNA-Seq ADIPOR2-FOXJ2 ADIPOR2 chr12 1863680 + FOXJ2 chr12 8197356 + Exonic hg19 BRCA TCGA-E2-A1LL-01A 23 67 In-Frame Intra-chr p13.33 p13.31 Transcription factor Seq+ 18690 ChimerSeq STARFusion TCGA_RNA-Seq LCOR-CPNE8 LCOR chr10 98593236 + CPNE8 chr12 39096723 - Exonic hg19 BRCA TCGA-E2-A1LL-01A 17 48 5'UTR-CDS Inter-chr q24.1 Transcription factor q12 Seq+ 18691 ChimerSeq STARFusion TCGA_RNA-Seq RASSF8-RERGL RASSF8 chr12 26112081 + RERGL chr12 18241890 - Exonic hg19 BRCA TCGA-E2-A1LL-01A 11 28 5'UTR-CDS Intra-chr p12.1 Tumor suppressor gene p12.3 Seq+ 18692 ChimerSeq STARFusion TCGA_RNA-Seq LCOR-CPNE8 LCOR chr10 98592156 + CPNE8 chr12 39096723 - Exonic hg19 BRCA TCGA-E2-A1LL-01A 2 48 5'UTR-CDS Inter-chr q24.1 Transcription factor q12 Seq+ 18693 ChimerSeq STARFusion TCGA_RNA-Seq MIR1204-PVT1 MIR1204 chr8 128808254 + PVT1 chr8 129108764 + Exonic hg19 BRCA TCGA-E2-A1LL-01A 5 33 5'UTR-5'UTR Intra-chr q24.21 q24.21 18694 ChimerSeq STARFusion TCGA_RNA-Seq MPP5-RDH11 MPP5 chr14 67708250 + RDH11 chr14 68151921 - Exonic hg19 BRCA TCGA-E2-A1LL-01A 6 26 5'UTR-CDS Intra-chr q23.3 q24.1 Seq+ 18695 ChimerSeq STARFusion TCGA_RNA-Seq SMAD3-MAP2K5 SMAD3 chr15 67418322 + MAP2K5 chr15 67855621 + Exonic hg19 BRCA TCGA-E2-A1LL-01A 9 14 5'UTR-CDS Intra-chr q22.33 Transcription factor q23 STE:STE7 Seq+ 18696 ChimerSeq STARFusion TCGA_RNA-Seq WNK1-ERC1 WNK1 chr12 863490 + ERC1 chr12 1289706 + Exonic hg19 BRCA TCGA-E2-A1LL-01A 7 16 In-Frame Intra-chr p13.33 Seq+ 18697 ChimerSeq STARFusion TCGA_RNA-Seq MTF2-FNBP1L MTF2 chr1 93545088 + FNBP1L chr1 93987639 + Exonic hg19 BRCA TCGA-E2-A1LL-01A 5 20 In-Frame Intra-chr p22.1 Transcription factor p22.1 Seq+ 18698 ChimerSeq STARFusion TCGA_RNA-Seq TEAD4-C2CD5 TEAD4 chr12 3069206 + C2CD5 chr12 22646271 - Exonic hg19 BRCA TCGA-E2-A1LL-01A 7 10 Out-of-frame Intra-chr p13.33 Transcription factor p12.1 Seq+ 18699 ChimerSeq STARFusion TCGA_RNA-Seq ARHGDIB-LOC101055625 ARHGDIB chr12 15103466 - LOC101055625 chr12 29639819 + Exonic hg19 BRCA TCGA-E2-A1LL-01A 4 19 Out-of-frame Intra-chr p12.3 18700 ChimerSeq STARFusion TCGA_RNA-Seq FGD4-ABCC9 FGD4 chr12 32717223 + ABCC9 chr12 22040868 - Exonic hg19 BRCA TCGA-E2-A1LL-01A 4 17 5'UTR-CDS Intra-chr p11.21 p12.1 Seq+ 18701 ChimerSeq STARFusion TCGA_RNA-Seq BRI3BP-AACS BRI3BP chr12 125478549 + AACS chr12 125618549 + Exonic hg19 BRCA TCGA-E2-A1LL-01A 2 21 Out-of-frame Intra-chr q24.31 q24.31 18702 ChimerSeq STARFusion TCGA_RNA-Seq SEMA3C-CNTNAP2 SEMA3C chr7 80545995 - CNTNAP2 chr7 148112509 + Exonic hg19 BRCA TCGA-E2-A1LL-01A 5 9 In-Frame Intra-chr q21.11 Tumor suppressor gene Seq+ 18703 ChimerSeq STARFusion TCGA_RNA-Seq EXOC4-LRGUK EXOC4 chr7 133314894 + LRGUK chr7 133868486 + Exonic hg19 BRCA TCGA-E2-A1LL-01A 3 14 In-Frame Intra-chr q33 q33 18704 ChimerSeq STARFusion TCGA_RNA-Seq NAP1L4-RPAP1 NAP1L4 chr11 3013484 - RPAP1 chr15 41829399 - Exonic hg19 BRCA TCGA-E2-A1LL-01A 2 16 5'UTR-5'UTR Inter-chr q15.1 Seq+ 18705 ChimerSeq STARFusion TCGA_RNA-Seq SMAD3-MAP2K5 SMAD3 chr15 67358698 + MAP2K5 chr15 67855621 + Exonic hg19 BRCA TCGA-E2-A1LL-01A 2 14 Out-of-frame Intra-chr q22.33 Transcription factor q23 STE:STE7 Seq+ 18706 ChimerSeq STARFusion TCGA_RNA-Seq SMAD3-MAP2K5 SMAD3 chr15 67418322 + MAP2K5 chr15 67873092 + Exonic hg19 BRCA TCGA-E2-A1LL-01A 2 14 5'UTR-CDS Intra-chr q22.33 Transcription factor q23 STE:STE7 Seq+ 18707 ChimerSeq STARFusion TCGA_RNA-Seq NF1-RAB11FIP4 NF1 chr17 29422387 + RAB11FIP4 chr17 29758831 + Exonic hg19 BRCA TCGA-E2-A1LL-01A 4 5 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 18708 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G3-HP1BP3 EIF4G3 chr1 21503215 - HP1BP3 chr1 21074148 - Exonic hg19 BRCA TCGA-E2-A1LL-01A 3 7 5'UTR-CDS Intra-chr p36.12 p36.12 Seq+ 18709 ChimerSeq STARFusion TCGA_RNA-Seq VCL-ADK VCL chr10 75758133 + ADK chr10 76468079 + Exonic hg19 BRCA TCGA-E2-A1LL-01A 3 7 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 18710 ChimerSeq STARFusion TCGA_RNA-Seq CERS5-SAMD11 CERS5 chr12 50560884 - SAMD11 chr1 874420 + Exonic hg19 BRCA TCGA-E2-A1LL-01A 2 8 Out-of-frame Inter-chr q13.12 p36.33 Seq+ 18711 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC9-TTC18 DNAJC9 chr10 75003601 - TTC18 chr10 75016174 - Exonic hg19 BRCA TCGA-E2-A1LL-01A 3 3 In-Frame Intra-chr q22.2 Seq+ 18712 ChimerSeq STARFusion TCGA_RNA-Seq RABGAP1-PNPLA7 RABGAP1 chr9 125703372 + PNPLA7 chr9 140379188 - Exonic hg19 BRCA TCGA-E2-A1LL-01A 2 4 5'UTR-CDS Intra-chr q33.2 q34.3 Seq+ 18713 ChimerSeq STARFusion TCGA_RNA-Seq ANAPC5-KDM2B ANAPC5 chr12 121764899 - KDM2B chr12 121958903 - Exonic hg19 BRCA TCGA-E2-A1LL-01A 2 3 Out-of-frame Intra-chr q24.31 q24.31 Transcription factor Seq+ 18714 ChimerSeq STARFusion TCGA_RNA-Seq KDM4B-LOC115110 KDM4B chr19 5082515 + LOC115110 chr1 2481713 - Exonic hg19 BRCA TCGA-E2-A1LL-01A 2 1 CDS-3'UTR Inter-chr p13.3 18715 ChimerSeq STARFusion TCGA_RNA-Seq PGM2L1-PPME1 PGM2L1 chr11 74109096 - PPME1 chr11 73961999 + Exonic hg19 BRCA TCGA-Z7-A8R6-01A 11 44 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 18716 ChimerSeq STARFusion TCGA_RNA-Seq BRD7-ZNF423 BRD7 chr16 50388336 - ZNF423 chr16 49559405 - Exonic hg19 BRCA TCGA-Z7-A8R6-01A 8 30 Out-of-frame Intra-chr q12.1 Tumor suppressor gene q12.1 Transcription factor Seq+ 18717 ChimerSeq STARFusion TCGA_RNA-Seq METAP1-EIF4E METAP1 chr4 99917018 + EIF4E chr4 99823133 - Exonic hg19 BRCA TCGA-E2-A1IL-01A 2 1 In-Frame Intra-chr q23 q23 Seq+ 18718 ChimerSeq STARFusion TCGA_RNA-Seq ARID4B-PCNXL2 ARID4B chr1 235420475 - PCNXL2 chr1 233314921 - Exonic hg19 BRCA TCGA-OL-A5D8-01A 42 111 In-Frame Intra-chr q42.3 Seq+ 18719 ChimerSeq STARFusion TCGA_RNA-Seq MAL2-NOV MAL2 chr8 120233997 + NOV chr8 120428626 + Exonic hg19 BRCA TCGA-OL-A5D8-01A 18 61 CDS-5'UTR Intra-chr q24.12 q24.12 Tumor suppressor gene Seq+ 18720 ChimerSeq STARFusion TCGA_RNA-Seq SETDB1-CD46 SETDB1 chr1 150923957 + CD46 chr1 207930359 + Exonic hg19 BRCA TCGA-OL-A5D8-01A 12 34 Out-of-frame Intra-chr q21.3 Transcription factor q32.2 Seq+ 18721 ChimerSeq STARFusion TCGA_RNA-Seq RRNAD1-ARNT RRNAD1 chr1 156699007 + ARNT chr1 150790506 - Exonic hg19 BRCA TCGA-OL-A5D8-01A 4 35 Out-of-frame Intra-chr q23.1 q21.3 Oncogene Transcription factor Seq+ 18722 ChimerSeq STARFusion TCGA_RNA-Seq NBPF14-NME7 NBPF14 chr1 148005403 - NME7 chr1 169102055 - Exonic hg19 BRCA TCGA-OL-A5D8-01A 11 5 Out-of-frame Intra-chr q21.2 q24.2 18723 ChimerSeq STARFusion TCGA_RNA-Seq ARID4B-MRPS10 ARID4B chr1 235490229 - MRPS10 chr6 42178334 - Exonic hg19 BRCA TCGA-OL-A5D8-01A 5 16 Out-of-frame Inter-chr q42.3 p21.1 18724 ChimerSeq STARFusion TCGA_RNA-Seq DYNC1I2-BRE DYNC1I2 chr2 172571953 + BRE chr2 28460069 + Exonic hg19 BRCA TCGA-OL-A5D8-01A 3 9 Out-of-frame Intra-chr q31.1 Seq+ 18725 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK2-STRN EIF2AK2 chr2 37341874 - STRN chr2 37152351 - Exonic hg19 BRCA TCGA-OL-A5D8-01A 2 12 In-Frame Intra-chr p22.2 p22.2 Seq+ 18726 ChimerSeq STARFusion TCGA_RNA-Seq BRE-C2orf91 BRE chr2 28352247 + C2orf91 chr2 42165753 - Exonic hg19 BRCA TCGA-OL-A5D8-01A 2 6 Out-of-frame Intra-chr p21 18727 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 BRCA TCGA-OL-A5D8-01A 2 1 In-Frame Intra-chr p11.21 p11.21 18728 ChimerSeq STARFusion TCGA_RNA-Seq LYST-GNG4 LYST chr1 235929379 - GNG4 chr1 235715537 - Exonic hg19 BRCA TCGA-W8-A86G-01A 2 0 Out-of-frame Intra-chr q42.3 18729 ChimerSeq STARFusion TCGA_RNA-Seq VMP1-C17orf64 VMP1 chr17 57851246 + C17orf64 chr17 58503144 + Exonic hg19 BRCA TCGA-AR-A24R-01A 30 248 In-Frame Intra-chr q23.1 q23.2 Seq+ 18730 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-CCDC170 ESR1 chr6 152129499 + CCDC170 chr6 151857453 + Exonic hg19 BRCA TCGA-AR-A24R-01A 16 39 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 KB Pub Seq+ 18731 ChimerSeq STARFusion TCGA_RNA-Seq AURKA-PCK1 AURKA chr20 54963212 - PCK1 chr20 56136428 + Exonic hg19 BRCA TCGA-AR-A24R-01A 9 26 CDS-5'UTR Intra-chr q13.2 Oncogene q13.31 Seq+ 18732 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-CCDC170 ESR1 chr6 152129499 + CCDC170 chr6 151859180 + Exonic hg19 BRCA TCGA-AR-A24R-01A 2 39 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 KB Pub Seq+ 18733 ChimerSeq STARFusion TCGA_RNA-Seq FOXK2-ARFGAP1 FOXK2 chr17 80561551 + ARFGAP1 chr20 61912643 + Exonic hg19 BRCA TCGA-AR-A24R-01A 3 25 3'UTR-CDS Inter-chr q25.3 Transcription factor q13.33 Seq+ 18734 ChimerSeq STARFusion TCGA_RNA-Seq STRADA-PPM1D STRADA chr17 61805694 - PPM1D chr17 58700882 + Exonic hg19 BRCA TCGA-AR-A24R-01A 2 1 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.2 18735 ChimerSeq STARFusion TCGA_RNA-Seq PDS5B-UBR2 PDS5B chr13 33160730 + UBR2 chr6 42658770 + Exonic hg19 BRCA TCGA-AR-A24R-01A 2 0 5'UTR-CDS Inter-chr q13.1 Tumor suppressor gene p21.1 Seq+ 18736 ChimerSeq STARFusion TCGA_RNA-Seq SCMH1-PPT1 SCMH1 chr1 41536267 - PPT1 chr1 40539855 - Exonic hg19 BRCA TCGA-E9-A1R7-01A 40 117 Out-of-frame Intra-chr p34.2 Transcription factor p34.2 Seq+ 18737 ChimerSeq STARFusion TCGA_RNA-Seq RMND1-ZDHHC14 RMND1 chr6 151738414 - ZDHHC14 chr6 158093756 + Exonic hg19 BRCA TCGA-E9-A1R7-01A 6 56 In-Frame Intra-chr q25.1 q25.3 Seq+ 18738 ChimerSeq STARFusion TCGA_RNA-Seq TAF4-FAF1 TAF4 chr20 60587871 - FAF1 chr1 51050483 - Exonic hg19 BRCA TCGA-E9-A1R7-01A 7 37 In-Frame Inter-chr p32.3 Seq+ 18739 ChimerSeq STARFusion TCGA_RNA-Seq RMND1-ZDHHC14 RMND1 chr6 151738414 - ZDHHC14 chr6 158093801 + Exonic hg19 BRCA TCGA-E9-A1R7-01A 2 56 In-Frame Intra-chr q25.1 q25.3 Seq+ 18740 ChimerSeq STARFusion TCGA_RNA-Seq ACOT11-C8B ACOT11 chr1 55051577 + C8B chr1 57417853 - Exonic hg19 BRCA TCGA-E9-A1R7-01A 9 22 In-Frame Intra-chr p32.3 p32.2 Seq+ 18741 ChimerSeq STARFusion TCGA_RNA-Seq PEF1-OSBPL9 PEF1 chr1 32110442 - OSBPL9 chr1 52211208 + Exonic hg19 BRCA TCGA-E9-A1R7-01A 11 5 In-Frame Intra-chr p35.2 p32.3 Seq+ 18742 ChimerSeq STARFusion TCGA_RNA-Seq FAM157A-C9 FAM157A chr3 197896743 + C9 chr5 39316131 - Exonic hg19 BRCA TCGA-E9-A1R7-01A 4 16 3'UTR-CDS Inter-chr q29 p13.1 Seq+ 18743 ChimerSeq STARFusion TCGA_RNA-Seq KRTCAP2-NTRK1 KRTCAP2 chr1 155145041 - NTRK1 chr1 156807518 + Exonic hg19 BRCA TCGA-E9-A1R7-01A 4 13 CDS-5'UTR Intra-chr q22 q23.1 Oncogene 18744 ChimerSeq STARFusion TCGA_RNA-Seq SEC22B-ACOT11 SEC22B chr1 145104017 + ACOT11 chr1 55062932 + Exonic hg19 BRCA TCGA-E9-A1R7-01A 3 17 Out-of-frame Intra-chr p12 p32.3 Seq+ 18745 ChimerSeq STARFusion TCGA_RNA-Seq FOXJ3-ZNF362 FOXJ3 chr1 42730786 - ZNF362 chr1 33741701 + Exonic hg19 BRCA TCGA-E9-A1R7-01A 4 10 Out-of-frame Intra-chr p34.2 Transcription factor p35.1 Transcription factor Seq+ 18746 ChimerSeq STARFusion TCGA_RNA-Seq FAF1-HCRTR1 FAF1 chr1 50956260 - HCRTR1 chr1 32098037 + Exonic hg19 BRCA TCGA-E9-A1R7-01A 4 9 CDS-3'UTR Intra-chr p32.3 p35.2 Seq+ 18747 ChimerSeq STARFusion TCGA_RNA-Seq MOCS3-NIPAL3 MOCS3 chr20 49578110 + NIPAL3 chr1 24798588 + Exonic hg19 BRCA TCGA-E9-A1R7-01A 4 9 Out-of-frame Inter-chr q13.13 p36.11 Seq+ 18748 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL9-C1orf87 OSBPL9 chr1 52117713 + C1orf87 chr1 60476128 - Exonic hg19 BRCA TCGA-E9-A1R7-01A 3 11 Out-of-frame Intra-chr p32.3 p32.1 Seq+ 18749 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-NARF SEPT9 chr17 75303279 + NARF chr17 80430440 + Exonic hg19 BRCA TCGA-BH-A0DG-01A 40 111 In-Frame Intra-chr q25.3 Seq+ 18750 ChimerSeq STARFusion TCGA_RNA-Seq SRP68-LPO SRP68 chr17 74036500 - LPO chr17 56327776 + Exonic hg19 BRCA TCGA-BH-A0DG-01A 15 80 In-Frame Intra-chr q25.1 q22 Seq+ 18751 ChimerSeq STARFusion TCGA_RNA-Seq LITAF-BCAR4 LITAF chr16 11680742 - BCAR4 chr16 11914154 - Exonic hg19 BRCA TCGA-BH-A0DG-01A 16 19 5'UTR-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 18752 ChimerSeq STARFusion TCGA_RNA-Seq USP32-PGS1 USP32 chr17 58329742 - PGS1 chr17 76415627 + Exonic hg19 BRCA TCGA-BH-A0DG-01A 4 16 Out-of-frame Intra-chr q23.2 q25.3 Seq+ 18753 ChimerSeq STARFusion TCGA_RNA-Seq FAM117A-VMP1 FAM117A chr17 47841254 - VMP1 chr17 57808782 + Exonic hg19 BRCA TCGA-BH-A0DG-01A 2 8 CDS-5'UTR Intra-chr q21.33 q23.1 Seq+ 18754 ChimerSeq STARFusion TCGA_RNA-Seq DCUN1D2-TGIF1 DCUN1D2 chr13 114144982 - TGIF1 chr18 3456352 + Exonic hg19 BRCA TCGA-BH-A0DG-01A 2 1 Out-of-frame Inter-chr q34 p11.31 Transcription factor 18755 ChimerSeq STARFusion TCGA_RNA-Seq TMEM5-CAND1 TMEM5 chr12 64174954 + CAND1 chr12 67675690 + Exonic hg19 BRCA TCGA-BH-A0DG-01A 2 0 Out-of-frame Intra-chr q14.2 q14.3 18756 ChimerSeq STARFusion TCGA_RNA-Seq DOLPP1-SPTAN1 DOLPP1 chr9 131849077 + SPTAN1 chr9 131379919 + Exonic hg19 BRCA TCGA-AC-A62Y-01A 4 26 In-Frame Intra-chr q34.11 q34.11 Seq+ 18757 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 BRCA TCGA-AC-A62Y-01A 2 2 In-Frame Intra-chr p11.21 p11.21 18758 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R5D-ASCC3 PPP2R5D chr6 42957426 + ASCC3 chr6 101215221 - Exonic hg19 BRCA TCGA-BH-A0BO-01A 3 6 In-Frame Intra-chr p21.1 q16.3 Seq+ 18759 ChimerSeq STARFusion TCGA_RNA-Seq C22orf39-IGHA2 C22orf39 chr22 19344505 - IGHA2 chr14 106054733 - Exonic hg19 BRCA TCGA-BH-A8G0-01A 10 1 Out-of-frame Inter-chr q11.21 18760 ChimerSeq STARFusion TCGA_RNA-Seq HIRA-IGHA2 HIRA chr22 19344505 - IGHA2 chr14 106054733 - Exonic hg19 BRCA TCGA-BH-A8G0-01A 10 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 18761 ChimerSeq STARFusion TCGA_RNA-Seq CDS2-WASH3P CDS2 chr20 5107795 + WASH3P chr15 102506273 + Exonic hg19 BRCA TCGA-BH-A1FH-01A 68 368 CDS-5'UTR Inter-chr p12.3 q26.3 18762 ChimerSeq STARFusion TCGA_RNA-Seq CDS2-WASH3P CDS2 chr20 5109396 + WASH3P chr15 102506273 + Exonic hg19 BRCA TCGA-BH-A1FH-01A 8 359 CDS-5'UTR Inter-chr p12.3 q26.3 18763 ChimerSeq STARFusion TCGA_RNA-Seq KIF16B-PLCB1 KIF16B chr20 16553874 - PLCB1 chr20 8665579 + Exonic hg19 BRCA TCGA-BH-A1FH-01A 9 51 Out-of-frame Intra-chr p12.1 p12.3 Seq+ 18764 ChimerSeq STARFusion TCGA_RNA-Seq FAM104A-SLC39A11 FAM104A chr17 71223304 - SLC39A11 chr17 71027853 - Exonic hg19 BRCA TCGA-BH-A1FH-01A 6 20 In-Frame Intra-chr q25.1 q25.1 Seq+ 18765 ChimerSeq STARFusion TCGA_RNA-Seq OLA1-METTL8 OLA1 chr2 175087761 - METTL8 chr2 172217023 - Exonic hg19 BRCA TCGA-BH-A1FH-01A 5 7 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 18766 ChimerSeq STARFusion TCGA_RNA-Seq USP32-CDH12P1 USP32 chr17 58365884 - CDH12P1 chr5 70156406 - Exonic hg19 BRCA TCGA-BH-A1FH-01A 2 19 Out-of-frame Inter-chr q23.2 q13.2 18767 ChimerSeq STARFusion TCGA_RNA-Seq RGPD5-NBEA RGPD5 chr2 110565981 + NBEA chr13 36158035 + Exonic hg19 BRCA TCGA-D8-A27R-01A 30 36 In-Frame Inter-chr q13 q13.3 Seq+ 18768 ChimerSeq STARFusion TCGA_RNA-Seq TBR1-PSMD14 TBR1 chr2 162276768 + PSMD14 chr2 162251589 + Exonic hg19 BRCA TCGA-D8-A27R-01A 6 16 Out-of-frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 18769 ChimerSeq STARFusion TCGA_RNA-Seq CTSH-RASGRF1 CTSH chr15 79221754 - RASGRF1 chr15 79254578 - Exonic hg19 BRCA TCGA-D8-A27R-01A 5 19 In-Frame Intra-chr q25.1 q25.1 Seq+ 18770 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC7-ASTN2 ZCCHC7 chr9 37126939 + ASTN2 chr9 119626012 - Exonic hg19 BRCA TCGA-D8-A27R-01A 4 14 Out-of-frame Intra-chr p13.2 q33.1 Seq+ 18771 ChimerSeq STARFusion TCGA_RNA-Seq SENP6-GPR124 SENP6 chr6 76373234 + GPR124 chr8 37672414 + Exonic hg19 BRCA TCGA-D8-A27R-01A 4 13 Out-of-frame Inter-chr q14.1 Seq+ 18772 ChimerSeq STARFusion TCGA_RNA-Seq TRIM32-MELK TRIM32 chr9 119449660 + MELK chr9 36607572 + Exonic hg19 BRCA TCGA-D8-A27R-01A 4 13 5'UTR-5'UTR Intra-chr q33.1 Tumor suppressor gene p13.2 CAMK:CAMKL Seq+ 18773 ChimerSeq STARFusion TCGA_RNA-Seq LNPEP-PART1 LNPEP chr5 96339250 + PART1 chr5 59816847 + Exonic hg19 BRCA TCGA-D8-A27R-01A 3 7 CDS-5'UTR Intra-chr q15 q12.1 Seq+ 18774 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-CDC6 FBXL20 chr17 37557614 - CDC6 chr17 38445660 + Exonic hg19 BRCA TCGA-C8-A278-01A 17 20 CDS-3'UTR Intra-chr q12 q21.2 Seq+ 18775 ChimerSeq STARFusion TCGA_RNA-Seq C16orf72-ACSM2A C16orf72 chr16 9186858 + ACSM2A chr16 20445297 + Exonic hg19 BRCA TCGA-C8-A278-01A 5 44 CDS-5'UTR Intra-chr p13.2 p12.3 Seq+ 18776 ChimerSeq STARFusion TCGA_RNA-Seq ZNF451-PRIM2 ZNF451 chr6 56963939 + PRIM2 chr6 57372288 + Exonic hg19 BRCA TCGA-C8-A278-01A 7 30 In-Frame Intra-chr p12.1 Transcription factor p11.2 Seq+ 18777 ChimerSeq STARFusion TCGA_RNA-Seq AEBP1-IGHG3 AEBP1 chr7 44152323 + IGHG3 chr14 106330069 - Exonic hg19 BRCA TCGA-C8-A278-01A 12 2 Out-of-frame Inter-chr p13 Transcription factor 18778 ChimerSeq STARFusion TCGA_RNA-Seq C16orf72-ACSM2A C16orf72 chr16 9186858 + ACSM2A chr16 20471429 + Exonic hg19 BRCA TCGA-C8-A278-01A 4 25 CDS-5'UTR Intra-chr p13.2 p12.3 Seq+ 18779 ChimerSeq STARFusion TCGA_RNA-Seq GDPD5-IGHG3 GDPD5 chr11 75148016 - IGHG3 chr14 106330069 - Exonic hg19 BRCA TCGA-C8-A278-01A 10 1 Out-of-frame Inter-chr q13.5 18780 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-CDC6 FBXL20 chr17 37558426 - CDC6 chr17 38445660 + Exonic hg19 BRCA TCGA-C8-A278-01A 5 20 5'UTR-3'UTR Intra-chr q12 q21.2 Seq+ 18781 ChimerSeq STARFusion TCGA_RNA-Seq C16orf72-ACSM2A C16orf72 chr16 9186858 + ACSM2A chr16 20462921 + Exonic hg19 BRCA TCGA-C8-A278-01A 3 25 CDS-5'UTR Intra-chr p13.2 p12.3 Seq+ 18782 ChimerSeq STARFusion TCGA_RNA-Seq MLLT10-SNTG1 MLLT10 chr10 22024164 + SNTG1 chr8 51415338 + Exonic hg19 BRCA TCGA-C8-A278-01A 7 7 In-Frame Inter-chr p12.31 Oncogene q11.21 Seq+ 18783 ChimerSeq STARFusion TCGA_RNA-Seq DHX40-ACSM2B DHX40 chr17 57665414 + ACSM2B chr16 20552095 - Exonic hg19 BRCA TCGA-C8-A278-01A 3 9 Out-of-frame Inter-chr q23.1 p12.3 Seq+ 18784 ChimerSeq STARFusion TCGA_RNA-Seq AP1M1-RAB8A AP1M1 chr19 16319988 + RAB8A chr19 16236280 + Exonic hg19 BRCA TCGA-AC-A5EH-01A 8 18 In-Frame Intra-chr p13.11 p13.11 Seq+ 18785 ChimerSeq STARFusion TCGA_RNA-Seq EEA1-TMCC3 EEA1 chr12 93285405 - TMCC3 chr12 94976314 - Exonic hg19 BRCA TCGA-AC-A5EH-01A 2 10 In-Frame Intra-chr q22 Transcription factor q22 Seq+ 18786 ChimerSeq STARFusion TCGA_RNA-Seq APP-FSIP1 APP chr21 27326904 - FSIP1 chr15 39893127 - Exonic hg19 BRCA TCGA-A2-A04R-01A 2 1 In-Frame Inter-chr q21.3 q14 18787 ChimerSeq STARFusion TCGA_RNA-Seq CDH1-CCDC132 CDH1 chr16 68857529 + CCDC132 chr7 92952923 + Exonic hg19 BRCA TCGA-AO-A12E-01A 131 316 In-Frame Inter-chr q22.1 Oncogene Tumor suppressor gene Seq+ 18788 ChimerSeq STARFusion TCGA_RNA-Seq MLL3-PRKAG2 MLL3 chr7 152007051 - PRKAG2 chr7 151329224 - Exonic hg19 BRCA TCGA-AO-A12E-01A 11 41 In-Frame Intra-chr Tumor suppressor gene q36.1 Seq+ 18789 ChimerSeq STARFusion TCGA_RNA-Seq CCDC132-CDH1 CCDC132 chr7 92940584 + CDH1 chr16 68862077 + Exonic hg19 BRCA TCGA-AO-A12E-01A 10 40 In-Frame Inter-chr q22.1 Oncogene Tumor suppressor gene Seq+ 18790 ChimerSeq STARFusion TCGA_RNA-Seq GALNT11-PRKAG2 GALNT11 chr7 151810483 + PRKAG2 chr7 151262971 - Exonic hg19 BRCA TCGA-AO-A12E-01A 8 23 In-Frame Intra-chr q36.1 q36.1 Seq+ 18791 ChimerSeq STARFusion TCGA_RNA-Seq PRKAG2-MLL3 PRKAG2 chr7 151329155 - MLL3 chr7 151834009 - Exonic hg19 BRCA TCGA-AO-A12E-01A 2 2 Out-of-frame Intra-chr q36.1 Tumor suppressor gene Seq+ 18792 ChimerSeq STARFusion TCGA_RNA-Seq KCTD1-PARM1 KCTD1 chr18 24237324 - PARM1 chr4 75937635 + Exonic hg19 BRCA TCGA-AO-A12E-01A 2 0 Out-of-frame Inter-chr q11.2 q13.3 18793 ChimerSeq STARFusion TCGA_RNA-Seq SYNRG-CSH2 SYNRG chr17 35913217 - CSH2 chr17 61950699 - Exonic hg19 BRCA TCGA-E2-A15H-01A 70 264 In-Frame Intra-chr q23.3 Seq+ 18794 ChimerSeq STARFusion TCGA_RNA-Seq SYNRG-CSH2 SYNRG chr17 35913217 - CSH2 chr17 61973595 - Exonic hg19 BRCA TCGA-E2-A15H-01A 32 260 CDS-5'UTR Intra-chr q23.3 Seq+ 18795 ChimerSeq STARFusion TCGA_RNA-Seq SYNRG-CSH2 SYNRG chr17 35913217 - CSH2 chr17 61958879 - Exonic hg19 BRCA TCGA-E2-A15H-01A 21 211 CDS-5'UTR Intra-chr q23.3 Seq+ 18796 ChimerSeq STARFusion TCGA_RNA-Seq CHMP5-VMP1 CHMP5 chr9 33266112 + VMP1 chr17 57886157 + Exonic hg19 BRCA TCGA-E2-A15H-01A 51 90 In-Frame Inter-chr p13.3 q23.1 Seq+ 18797 ChimerSeq STARFusion TCGA_RNA-Seq COIL-CDR2L COIL chr17 55038136 - CDR2L chr17 72995599 + Exonic hg19 BRCA TCGA-E2-A15H-01A 20 67 Out-of-frame Intra-chr q22 q25.1 Seq+ 18798 ChimerSeq STARFusion TCGA_RNA-Seq PHF12-OR2AM1P PHF12 chr17 27248706 - OR2AM1P chr9 36021917 + Exonic hg19 BRCA TCGA-E2-A15H-01A 13 40 Out-of-frame Inter-chr q11.2 p13.3 Seq+ 18799 ChimerSeq STARFusion TCGA_RNA-Seq USP32-LINC00511 USP32 chr17 58342773 - LINC00511 chr17 70427365 - Exonic hg19 BRCA TCGA-E2-A15H-01A 9 41 CDS-3'UTR Intra-chr q23.2 q24.3 18800 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC9-COL22A1 TRAPPC9 chr8 141370149 - COL22A1 chr8 139768072 - Exonic hg19 BRCA TCGA-E2-A15H-01A 6 47 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 18801 ChimerSeq STARFusion TCGA_RNA-Seq USP32-LINC00511 USP32 chr17 58342773 - LINC00511 chr17 70424439 - Exonic hg19 BRCA TCGA-E2-A15H-01A 2 41 CDS-3'UTR Intra-chr q23.2 q24.3 18802 ChimerSeq STARFusion TCGA_RNA-Seq BPTF-CCDC40 BPTF chr17 65928135 + CCDC40 chr17 78021078 + Exonic hg19 BRCA TCGA-E2-A15H-01A 4 28 Out-of-frame Intra-chr q24.2 Transcription factor q25.3 Seq+ 18803 ChimerSeq STARFusion TCGA_RNA-Seq AKAP1-GGA3 AKAP1 chr17 55162759 + GGA3 chr17 73242877 - Exonic hg19 BRCA TCGA-E2-A15H-01A 6 18 5'UTR-5'UTR Intra-chr q22 q25.1 Seq+ 18804 ChimerSeq STARFusion TCGA_RNA-Seq CDC6-RNFT1 CDC6 chr17 38457282 + RNFT1 chr17 58040645 - Exonic hg19 BRCA TCGA-E2-A15H-01A 5 19 3'UTR-CDS Intra-chr q21.2 q23.1 Seq+ 18805 ChimerSeq STARFusion TCGA_RNA-Seq AKAP1-C17orf67 AKAP1 chr17 55184539 + C17orf67 chr17 54893419 - Exonic hg19 BRCA TCGA-E2-A15H-01A 5 18 CDS-5'UTR Intra-chr q22 q22 Seq+ 18806 ChimerSeq STARFusion TCGA_RNA-Seq APTX-GNE APTX chr9 33001565 - GNE chr9 36220017 - Exonic hg19 BRCA TCGA-E2-A15H-01A 4 12 Out-of-frame Intra-chr p21.1 p13.3 Seq+ 18807 ChimerSeq STARFusion TCGA_RNA-Seq AKAP1-C17orf67 AKAP1 chr17 55184539 + C17orf67 chr17 54893371 - Exonic hg19 BRCA TCGA-E2-A15H-01A 2 18 CDS-5'UTR Intra-chr q22 q22 Seq+ 18808 ChimerSeq STARFusion TCGA_RNA-Seq AKAP1-C17orf67 AKAP1 chr17 55184539 + C17orf67 chr17 54872541 - Exonic hg19 BRCA TCGA-E2-A15H-01A 2 18 Out-of-frame Intra-chr q22 q22 Seq+ 18809 ChimerSeq STARFusion TCGA_RNA-Seq AKAP1-GGA3 AKAP1 chr17 55162759 + GGA3 chr17 73245089 - Exonic hg19 BRCA TCGA-E2-A15H-01A 2 18 5'UTR-3'UTR Intra-chr q22 q25.1 Seq+ 18810 ChimerSeq STARFusion TCGA_RNA-Seq MSI2-WIPF2 MSI2 chr17 55478832 + WIPF2 chr17 38412643 + Exonic hg19 BRCA TCGA-E2-A15H-01A 2 10 CDS-5'UTR Intra-chr q22 q21.2 Seq+ 18811 ChimerSeq STARFusion TCGA_RNA-Seq RSF1-LOC100130700 RSF1 chr11 77451776 - LOC100130700 chr16 34739785 - Exonic hg19 BRCA TCGA-A2-A1FX-01A 34 129 CDS-3'UTR Inter-chr q14.1 18812 ChimerSeq STARFusion TCGA_RNA-Seq TMED5-HFM1 TMED5 chr1 93645611 - HFM1 chr1 91818709 - Exonic hg19 BRCA TCGA-A2-A1FX-01A 6 19 Out-of-frame Intra-chr p22.1 p22.2 Seq+ 18813 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80950355 - MRPS28 chr8 80831383 - Exonic hg19 BRCA TCGA-A2-A1FX-01A 4 4 Out-of-frame Intra-chr q21.13 q21.13 18814 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-TPGS1 SBNO2 chr19 1149368 - TPGS1 chr19 518889 + Exonic hg19 BRCA TCGA-A2-A1FX-01A 2 4 In-Frame Intra-chr p13.3 p13.3 18815 ChimerSeq STARFusion TCGA_RNA-Seq SGTA-INSL3 SGTA chr19 2762504 - INSL3 chr19 17927868 - Exonic hg19 BRCA TCGA-AC-A8OP-01A 19 110 Out-of-frame Intra-chr p13.3 p13.11 Seq+ 18816 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992064 + VMP1 chr17 57915656 + Exonic hg19 BRCA TCGA-AC-A8OP-01A 22 68 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 18817 ChimerSeq STARFusion TCGA_RNA-Seq MAP2K3-NOS2P2 MAP2K3 chr17 21208440 + NOS2P2 chr17 18400988 - Exonic hg19 BRCA TCGA-AC-A8OP-01A 3 22 Out-of-frame Intra-chr p11.2 STE:STE7 Seq+ 18818 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-EVPLL RPS6KB1 chr17 58003943 + EVPLL chr17 18278822 + Exonic hg19 BRCA TCGA-AC-A8OP-01A 3 6 CDS-5'UTR Intra-chr q23.1 Oncogene 18819 ChimerSeq STARFusion TCGA_RNA-Seq LLGL2-TANC2 LLGL2 chr17 73559544 + TANC2 chr17 61315175 + Exonic hg19 BRCA TCGA-AC-A8OP-01A 2 6 In-Frame Intra-chr q25.1 q23.2 Seq+ 18820 ChimerSeq STARFusion TCGA_RNA-Seq CTIF-DYM CTIF chr18 46197115 + DYM chr18 46645296 - Exonic hg19 BRCA TCGA-D8-A141-01A 2 0 In-Frame Intra-chr q21.1 18821 ChimerSeq STARFusion TCGA_RNA-Seq SRPK2-MLL5 SRPK2 chr7 105029095 - MLL5 chr7 104681286 + Exonic hg19 BRCA TCGA-D8-A141-01A 2 0 CDS-5'UTR Intra-chr q22.3 CMGC:SRPK 18822 ChimerSeq STARFusion TCGA_RNA-Seq ELMO2-STAP1 ELMO2 chr20 45008892 - STAP1 chr4 68441103 + Exonic hg19 BRCA TCGA-AR-A1AN-01A 16 64 In-Frame Inter-chr q13.12 q13.2 Seq+ 18823 ChimerSeq STARFusion TCGA_RNA-Seq CAPZA2-MET CAPZA2 chr7 116550365 + MET chr7 116409699 + Exonic hg19 BRCA TCGA-AR-A1AN-01A 4 37 In-Frame Intra-chr q31.2 q31.2 TK:Met Oncogene KB Pub Seq+ 18824 ChimerSeq STARFusion TCGA_RNA-Seq SFRP1-ARMC5 SFRP1 chr8 41160980 - ARMC5 chr16 31473243 + Exonic hg19 BRCA TCGA-AR-A1AN-01A 6 11 In-Frame Inter-chr p11.21 Tumor suppressor gene p11.2 Tumor suppressor gene Seq+ 18825 ChimerSeq STARFusion TCGA_RNA-Seq UBL3-SLC7A1 UBL3 chr13 30346249 - SLC7A1 chr13 30127997 - Exonic hg19 BRCA TCGA-AR-A1AN-01A 3 12 CDS-5'UTR Intra-chr q12.3 q12.3 18826 ChimerSeq STARFusion TCGA_RNA-Seq ADAM15-FLAD1 ADAM15 chr1 155029577 + FLAD1 chr1 154962635 + Exonic hg19 BRCA TCGA-AR-A1AN-01A 2 12 In-Frame Intra-chr q21.3 q21.3 18827 ChimerSeq STARFusion TCGA_RNA-Seq HELZ-PITPNC1 HELZ chr17 65103285 - PITPNC1 chr17 65688688 + Exonic hg19 BRCA TCGA-E2-A1B5-01A 4 25 In-Frame Intra-chr q24.2 q24.2 Seq+ 18828 ChimerSeq STARFusion TCGA_RNA-Seq DOPEY2-SH3BGR DOPEY2 chr21 37612253 + SH3BGR chr21 40847061 + Exonic hg19 BRCA TCGA-E2-A1B5-01A 2 10 Out-of-frame Intra-chr q22.12 q22.2 Seq+ 18829 ChimerSeq STARFusion TCGA_RNA-Seq MICU1-ARHGAP22 MICU1 chr10 74167687 - ARHGAP22 chr10 49654662 - Exonic hg19 BRCA TCGA-BH-A0HU-01A 17 66 Out-of-frame Intra-chr q22.1 q11.23 Seq+ 18830 ChimerSeq STARFusion TCGA_RNA-Seq SMURF1-PDAP1 SMURF1 chr7 98741349 - PDAP1 chr7 98995636 - Exonic hg19 BRCA TCGA-BH-A0HU-01A 8 19 Out-of-frame Intra-chr q22.1 Seq+ 18831 ChimerSeq STARFusion TCGA_RNA-Seq FRYL-ZNF606 FRYL chr4 48712536 - ZNF606 chr19 58500089 - Exonic hg19 BRCA TCGA-BH-A0HU-01A 3 10 5'UTR-CDS Inter-chr p11 q13.43 Transcription factor Seq+ 18832 ChimerSeq STARFusion TCGA_RNA-Seq SLC16A9-ADK SLC16A9 chr10 61469237 - ADK chr10 76468079 + Exonic hg19 BRCA TCGA-AR-A24L-01A 61 182 5'UTR-CDS Intra-chr q21.2 q22.2 Seq+ 18833 ChimerSeq STARFusion TCGA_RNA-Seq ARAP1-INTS5 ARAP1 chr11 72463373 - INTS5 chr11 62417471 - Exonic hg19 BRCA TCGA-AR-A24L-01A 17 25 5'UTR-CDS Intra-chr q13.4 q12.3 Seq+ 18834 ChimerSeq STARFusion TCGA_RNA-Seq EIF2B3-HYI EIF2B3 chr1 45392300 - HYI chr1 43917990 - Exonic hg19 BRCA TCGA-AR-A24L-01A 2 12 In-Frame Intra-chr p34.1 p34.2 Seq+ 18835 ChimerSeq STARFusion TCGA_RNA-Seq MCU-CHCHD1 MCU chr10 74594186 + CHCHD1 chr10 75542832 + Exonic hg19 BRCA TCGA-AR-A24L-01A 3 8 Out-of-frame Intra-chr q22.1 q22.2 Seq+ 18836 ChimerSeq STARFusion TCGA_RNA-Seq MCU-CHCHD1 MCU chr10 74594186 + CHCHD1 chr10 75542081 + Exonic hg19 BRCA TCGA-AR-A24L-01A 3 8 In-Frame Intra-chr q22.1 q22.2 Seq+ 18837 ChimerSeq STARFusion TCGA_RNA-Seq PARD6G-SLC14A2 PARD6G chr18 77960593 - SLC14A2 chr18 43063198 + Exonic hg19 BRCA TCGA-AR-A24L-01A 2 10 CDS-5'UTR Intra-chr q23 q12.3 Seq+ 18838 ChimerSeq STARFusion TCGA_RNA-Seq LIN52-CCDC176 LIN52 chr14 74567941 + CCDC176 chr14 74522287 + Exonic hg19 BRCA TCGA-AR-A24L-01A 2 7 Out-of-frame Intra-chr q24.3 18839 ChimerSeq STARFusion TCGA_RNA-Seq STARD10-INTS5 STARD10 chr11 72466746 - INTS5 chr11 62417471 - Exonic hg19 BRCA TCGA-AR-A24L-01A 2 0 Out-of-frame Intra-chr q13.4 q12.3 18840 ChimerSeq STARFusion TCGA_RNA-Seq FGGY-CDH17 FGGY chr1 59978111 + CDH17 chr8 95174390 - Exonic hg19 BRCA TCGA-D8-A4Z1-01A 3 6 In-Frame Inter-chr p32.1 q22.1 Tumor suppressor gene Seq+ 18841 ChimerSeq STARFusion TCGA_RNA-Seq CABLES1-FTO CABLES1 chr18 20716571 + FTO chr16 54145674 + Exonic hg19 BRCA TCGA-S3-AA12-01A 94 203 In-Frame Inter-chr q11.2 Tumor suppressor gene q12.2 Seq+ 18842 ChimerSeq STARFusion TCGA_RNA-Seq GTF2E2-EIF4EBP1 GTF2E2 chr8 30510950 - EIF4EBP1 chr8 37914599 + Exonic hg19 BRCA TCGA-S3-AA12-01A 29 66 In-Frame Intra-chr p12 p11.23 Seq+ 18843 ChimerSeq STARFusion TCGA_RNA-Seq TXLNA-KHDRBS1 TXLNA chr1 32653725 + KHDRBS1 chr1 32525764 + Exonic hg19 BRCA TCGA-S3-AA12-01A 2 2 CDS-3'UTR Intra-chr p35.2 p35.2 18844 ChimerSeq STARFusion TCGA_RNA-Seq SARS-KIAA1324 SARS chr1 109766670 + KIAA1324 chr1 109704516 + Exonic hg19 BRCA TCGA-BH-A18V-01A 32 153 In-Frame Intra-chr p13.3 p13.3 Seq+ 18845 ChimerSeq STARFusion TCGA_RNA-Seq SARS-KIAA1324 SARS chr1 109756750 + KIAA1324 chr1 109704516 + Exonic hg19 BRCA TCGA-BH-A18V-01A 5 153 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 18846 ChimerSeq STARFusion TCGA_RNA-Seq MVP-KIF22 MVP chr16 29851780 + KIF22 chr16 29814770 + Exonic hg19 BRCA TCGA-BH-A18V-01A 23 56 In-Frame Intra-chr p11.2 p11.2 Seq+ 18847 ChimerSeq STARFusion TCGA_RNA-Seq FOXP1-EIF4E3 FOXP1 chr3 71542577 - EIF4E3 chr3 71777774 - Exonic hg19 BRCA TCGA-BH-A18V-01A 14 84 5'UTR-5'UTR Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor p13 Seq+ 18848 ChimerSeq STARFusion TCGA_RNA-Seq NRP2-PARD3B NRP2 chr2 206631527 + PARD3B chr2 206480180 + Exonic hg19 BRCA TCGA-BH-A18V-01A 20 53 Out-of-frame Intra-chr q33.3 q33.3 Seq+ 18849 ChimerSeq STARFusion TCGA_RNA-Seq RAB3D-TMEM205 RAB3D chr19 11450145 - TMEM205 chr19 11456304 - Exonic hg19 BRCA TCGA-BH-A18V-01A 22 36 5'UTR-5'UTR Intra-chr p13.2 p13.2 Seq+ 18850 ChimerSeq STARFusion TCGA_RNA-Seq FOXP1-EIF4E3 FOXP1 chr3 71542577 - EIF4E3 chr3 71759635 - Exonic hg19 BRCA TCGA-BH-A18V-01A 6 84 5'UTR-5'UTR Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor p13 Seq+ 18851 ChimerSeq STARFusion TCGA_RNA-Seq RUNX2-IFT88 RUNX2 chr6 45459851 + IFT88 chr13 21264844 + Exonic hg19 BRCA TCGA-BH-A18V-01A 13 47 In-Frame Inter-chr p21.1 Tumor suppressor gene Transcription factor q12.11 Tumor suppressor gene Seq+ 18852 ChimerSeq STARFusion TCGA_RNA-Seq ESRP1-INTS8 ESRP1 chr8 95718262 + INTS8 chr8 95862169 + Exonic hg19 BRCA TCGA-BH-A18V-01A 7 59 Out-of-frame Intra-chr q22.1 Tumor suppressor gene q22.1 Seq+ 18853 ChimerSeq STARFusion TCGA_RNA-Seq CP-SOX5 CP chr3 148939434 - SOX5 chr12 23999127 - Exonic hg19 BRCA TCGA-BH-A18V-01A 9 29 Out-of-frame Inter-chr q25.1 p12.1 Transcription factor Seq+ 18854 ChimerSeq STARFusion TCGA_RNA-Seq NRP2-PARD3B NRP2 chr2 206631542 + PARD3B chr2 206480180 + Exonic hg19 BRCA TCGA-BH-A18V-01A 2 53 Out-of-frame Intra-chr q33.3 q33.3 Seq+ 18855 ChimerSeq STARFusion TCGA_RNA-Seq PKM-TRPV3 PKM chr15 72502014 - TRPV3 chr17 3439007 - Exonic hg19 BRCA TCGA-BH-A18V-01A 8 11 Out-of-frame Inter-chr q23 p13.2 Seq+ 18856 ChimerSeq STARFusion TCGA_RNA-Seq RIMS2-BAALC RIMS2 chr8 104513290 + BAALC chr8 104240217 + Exonic hg19 BRCA TCGA-BH-A18V-01A 5 13 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 18857 ChimerSeq STARFusion TCGA_RNA-Seq MTMR2-MAML2 MTMR2 chr11 95657039 - MAML2 chr11 95724887 - Exonic hg19 BRCA TCGA-BH-A18V-01A 3 18 Out-of-frame Intra-chr q21 q21 Oncogene Seq+ 18858 ChimerSeq STARFusion TCGA_RNA-Seq RIMS2-BAALC RIMS2 chr8 104513290 + BAALC chr8 104225147 + Exonic hg19 BRCA TCGA-BH-A18V-01A 3 13 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 18859 ChimerSeq STARFusion TCGA_RNA-Seq DDR2-GAB1 DDR2 chr1 162688935 + GAB1 chr4 144336630 + Exonic hg19 BRCA TCGA-BH-A18V-01A 4 4 Out-of-frame Inter-chr q23.3 TK:DDR Oncogene Tumor suppressor gene q31.21 Seq+ 18860 ChimerSeq STARFusion TCGA_RNA-Seq EYA3-KIAA0247 EYA3 chr1 28362055 - KIAA0247 chr14 70125230 + Exonic hg19 BRCA TCGA-BH-A18V-01A 3 8 CDS-5'UTR Inter-chr p35.3 Seq+ 18861 ChimerSeq STARFusion TCGA_RNA-Seq SAP30BP-ICT1 SAP30BP chr17 73689562 + ICT1 chr17 73013173 + Exonic hg19 BRCA TCGA-BH-A18V-01A 3 8 Out-of-frame Intra-chr q25.1 Seq+ 18862 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86351941 + Exonic hg19 BRCA TCGA-BH-A18V-01A 3 5 Out-of-frame Intra-chr q21.2 q21.2 18863 ChimerSeq STARFusion TCGA_RNA-Seq LOC100506403-CLDN14 LOC100506403 chr21 36952958 - CLDN14 chr21 37834074 - Exonic hg19 BRCA TCGA-BH-A18V-01A 3 3 Out-of-frame Intra-chr q22.13 18864 ChimerSeq STARFusion TCGA_RNA-Seq PHOSPHO2-SSB PHOSPHO2 chr2 170554041 + SSB chr2 170657462 + Exonic hg19 BRCA TCGA-BH-A18V-01A 2 1 5'UTR-5'UTR Intra-chr q31.1 q31.1 18865 ChimerSeq STARFusion TCGA_RNA-Seq SPAG5-BLMH SPAG5 chr17 26925528 - BLMH chr17 28576186 - Exonic hg19 BRCA TCGA-A2-A25B-01A 41 105 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 18866 ChimerSeq STARFusion TCGA_RNA-Seq RCC2-PADI4 RCC2 chr1 17755602 - PADI4 chr1 17681028 + Exonic hg19 BRCA TCGA-A2-A25B-01A 24 63 Out-of-frame Intra-chr Seq+ 18867 ChimerSeq STARFusion TCGA_RNA-Seq FLOT2-PEX12 FLOT2 chr17 27215963 - PEX12 chr17 33904610 - Exonic hg19 BRCA TCGA-A2-A25B-01A 23 23 Out-of-frame Intra-chr q11.2 q12 Seq+ 18868 ChimerSeq STARFusion TCGA_RNA-Seq DDX42-BRIP1 DDX42 chr17 61884014 + BRIP1 chr17 59886118 - Exonic hg19 BRCA TCGA-A2-A25B-01A 11 47 In-Frame Intra-chr q23.3 q23.2 Oncogene Seq+ 18869 ChimerSeq STARFusion TCGA_RNA-Seq MAST4-NLN MAST4 chr5 66449408 + NLN chr5 65118609 + Exonic hg19 BRCA TCGA-A2-A25B-01A 12 37 In-Frame Intra-chr q12.3 AGC:MAST q12.3 Seq+ 18870 ChimerSeq STARFusion TCGA_RNA-Seq ADNP-DPM1 ADNP chr20 49545188 - DPM1 chr20 49562460 - Exonic hg19 BRCA TCGA-A2-A25B-01A 11 16 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.13 Seq+ 18871 ChimerSeq STARFusion TCGA_RNA-Seq UBQLN1-GKAP1 UBQLN1 chr9 86322415 - GKAP1 chr9 86421475 - Exonic hg19 BRCA TCGA-A2-A25B-01A 8 13 CDS-5'UTR Intra-chr q21.32 q21.32 Seq+ 18872 ChimerSeq STARFusion TCGA_RNA-Seq PITPNC1-BPTF PITPNC1 chr17 65574373 + BPTF chr17 65914830 + Exonic hg19 BRCA TCGA-A2-A25B-01A 5 21 Out-of-frame Intra-chr q24.2 q24.2 Transcription factor Seq+ 18873 ChimerSeq STARFusion TCGA_RNA-Seq RABEP1-ASPA RABEP1 chr17 5185815 + ASPA chr17 3397644 + Exonic hg19 BRCA TCGA-A2-A25B-01A 5 18 In-Frame Intra-chr p13.2 p13.2 Seq+ 18874 ChimerSeq STARFusion TCGA_RNA-Seq SMG6-WDR20 SMG6 chr17 2206308 - WDR20 chr14 102661275 + Exonic hg19 BRCA TCGA-A2-A25B-01A 3 23 5'UTR-5'UTR Inter-chr p13.3 q32.31 Seq+ 18875 ChimerSeq STARFusion TCGA_RNA-Seq RAD51D-GOLGA6L1 RAD51D chr17 33433405 - GOLGA6L1 chr15 22738181 + Exonic hg19 BRCA TCGA-A2-A25B-01A 2 24 In-Frame Inter-chr q12 18876 ChimerSeq STARFusion TCGA_RNA-Seq SMG6-WDR20 SMG6 chr17 2206927 - WDR20 chr14 102661275 + Exonic hg19 BRCA TCGA-A2-A25B-01A 2 23 Out-of-frame Inter-chr p13.3 q32.31 Seq+ 18877 ChimerSeq STARFusion TCGA_RNA-Seq USP36-OFCC1 USP36 chr17 76808942 - OFCC1 chr6 9705675 - Exonic hg19 BRCA TCGA-A2-A25B-01A 3 15 Out-of-frame Inter-chr q25.3 p24.3 Seq+ 18878 ChimerSeq STARFusion TCGA_RNA-Seq ADNP-DPM1 ADNP chr20 49547363 - DPM1 chr20 49562460 - Exonic hg19 BRCA TCGA-A2-A25B-01A 3 14 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.13 Seq+ 18879 ChimerSeq STARFusion TCGA_RNA-Seq UBQLN1-GKAP1 UBQLN1 chr9 86322415 - GKAP1 chr9 86368274 - Exonic hg19 BRCA TCGA-A2-A25B-01A 2 13 In-Frame Intra-chr q21.32 q21.32 Seq+ 18880 ChimerSeq STARFusion TCGA_RNA-Seq UBQLN1-GKAP1 UBQLN1 chr9 86322415 - GKAP1 chr9 86432042 - Exonic hg19 BRCA TCGA-A2-A25B-01A 2 13 CDS-5'UTR Intra-chr q21.32 q21.32 Seq+ 18881 ChimerSeq STARFusion TCGA_RNA-Seq SRCAP-MVP SRCAP chr16 30753229 + MVP chr16 29851499 + Exonic hg19 BRCA TCGA-D8-A1JM-01A 87 1012 3'UTR-CDS Intra-chr p11.2 Transcription factor p11.2 18882 ChimerSeq STARFusion TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105495490 - OBFC1 chr10 105648902 - Exonic hg19 BRCA TCGA-D8-A1JM-01A 41 112 In-Frame Intra-chr q24.33 Seq+ 18883 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R13B-C14orf2 PPP1R13B chr14 104313636 - C14orf2 chr14 104381526 - Exonic hg19 BRCA TCGA-D8-A1JM-01A 30 51 In-Frame Intra-chr q32.33 q32.33 Seq+ 18884 ChimerSeq STARFusion TCGA_RNA-Seq RBPMS-RILPL1 RBPMS chr8 30242674 + RILPL1 chr12 123970352 - Exonic hg19 BRCA TCGA-D8-A1JM-01A 22 55 In-Frame Inter-chr p12 q24.31 Seq+ 18885 ChimerSeq STARFusion TCGA_RNA-Seq FANCD2-MTMR14 FANCD2 chr3 10074656 + MTMR14 chr3 9719001 + Exonic hg19 BRCA TCGA-D8-A1JM-01A 14 66 In-Frame Intra-chr p25.3 Oncogene p25.3 Seq+ 18886 ChimerSeq STARFusion TCGA_RNA-Seq UBE2J1-RRAGD UBE2J1 chr6 90062258 - RRAGD chr6 90097309 - Exonic hg19 BRCA TCGA-D8-A1JM-01A 11 67 In-Frame Intra-chr q15 q15 Seq+ 18887 ChimerSeq STARFusion TCGA_RNA-Seq ST14-BARX2 ST14 chr11 130029955 + BARX2 chr11 129306646 + Exonic hg19 BRCA TCGA-D8-A1JM-01A 18 27 Out-of-frame Intra-chr q24.3 q24.3 Transcription factor Seq+ 18888 ChimerSeq STARFusion TCGA_RNA-Seq BCLAF1-MAP7 BCLAF1 chr6 136610851 - MAP7 chr6 136742937 - Exonic hg19 BRCA TCGA-D8-A1JM-01A 12 29 5'UTR-5'UTR Intra-chr q23.3 q23.3 Seq+ 18889 ChimerSeq STARFusion TCGA_RNA-Seq FANCD2-MTMR14 FANCD2 chr3 10070405 + MTMR14 chr3 9719001 + Exonic hg19 BRCA TCGA-D8-A1JM-01A 3 64 In-Frame Intra-chr p25.3 Oncogene p25.3 Seq+ 18890 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS15-BARX2 ADAMTS15 chr11 130343058 + BARX2 chr11 129306644 + Exonic hg19 BRCA TCGA-D8-A1JM-01A 3 33 Out-of-frame Intra-chr q24.3 q24.3 Transcription factor 18891 ChimerSeq STARFusion TCGA_RNA-Seq VPS53-MYH2 VPS53 chr17 505035 - MYH2 chr17 10444014 - Exonic hg19 BRCA TCGA-D8-A1JM-01A 3 10 Out-of-frame Intra-chr Tumor suppressor gene p13.1 Seq+ 18892 ChimerSeq STARFusion TCGA_RNA-Seq CACNA1I-TAB1 CACNA1I chr22 40058440 + TAB1 chr22 39822708 + Exonic hg19 BRCA TCGA-D8-A1JM-01A 3 9 In-Frame Intra-chr q13.1 q13.1 Seq+ 18893 ChimerSeq STARFusion TCGA_RNA-Seq RARA-THRA RARA chr17 38487648 + THRA chr17 38240088 + Exonic hg19 BRCA TCGA-GM-A2DA-01A 12 34 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q21.1 Tumor suppressor gene Transcription factor 18894 ChimerSeq STARFusion TCGA_RNA-Seq CDH1-DEXI CDH1 chr16 68842751 + DEXI chr16 11023416 - Exonic hg19 BRCA TCGA-B6-A0RN-01A 45 318 CDS-3'UTR Intra-chr q22.1 Oncogene Tumor suppressor gene p13.13 Seq+ 18895 ChimerSeq STARFusion TCGA_RNA-Seq IGSF3-CD58 IGSF3 chr1 117208906 - CD58 chr1 117087226 - Exonic hg19 BRCA TCGA-B6-A0RN-01A 11 26 In-Frame Intra-chr p13.1 p13.1 18896 ChimerSeq STARFusion TCGA_RNA-Seq DEXI-CDH1 DEXI chr16 11027701 - CDH1 chr16 68844100 + Exonic hg19 BRCA TCGA-B6-A0RN-01A 3 13 3'UTR-CDS Intra-chr p13.13 q22.1 Oncogene Tumor suppressor gene Seq+ 18897 ChimerSeq STARFusion TCGA_RNA-Seq FGFR1-ADAM18 FGFR1 chr8 38314874 - ADAM18 chr8 39463826 + Exonic hg19 BRCA TCGA-E2-A574-01A 9 42 Out-of-frame Intra-chr p11.23 TK:FGFR Oncogene Seq+ 18898 ChimerSeq STARFusion TCGA_RNA-Seq KAT6B-ADK KAT6B chr10 76603236 + ADK chr10 76349040 + Exonic hg19 BRCA TCGA-E2-A574-01A 7 47 In-Frame Intra-chr Oncogene q22.2 Seq+ 18899 ChimerSeq STARFusion TCGA_RNA-Seq CIAPIN1-COQ9 CIAPIN1 chr16 57474684 - COQ9 chr16 57484952 + Exonic hg19 BRCA TCGA-E2-A574-01A 4 13 In-Frame Intra-chr q21 q21 18900 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB7B-CKS1B ZBTB7B chr1 154975419 + CKS1B chr5 61808250 - Exonic hg19 BRCA TCGA-E2-A574-01A 5 8 5'UTR-5'UTR Inter-chr q21.3 Transcription factor q21.3 Oncogene Seq+ 18901 ChimerSeq STARFusion TCGA_RNA-Seq TMBIM4-IRAK3 TMBIM4 chr12 66539621 - IRAK3 chr12 66620503 + Exonic hg19 BRCA TCGA-E2-A574-01A 4 6 In-Frame Intra-chr q14.3 q14.3 TKL:IRAK 18902 ChimerSeq STARFusion TCGA_RNA-Seq TMBIM4-IRAK3 TMBIM4 chr12 66539621 - IRAK3 chr12 66620503 + Exonic hg19 BRCA TCGA-E2-A574-01A 4 6 In-Frame Intra-chr q14.3 q14.3 TKL:IRAK 18903 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB17-FAM131C ZBTB17 chr1 16271432 - FAM131C chr1 16386546 - Exonic hg19 BRCA TCGA-E2-A574-01A 3 9 Out-of-frame Intra-chr p36.13 Transcription factor p36.13 Seq+ 18904 ChimerSeq STARFusion TCGA_RNA-Seq SCGB1D2-ALDH3B1 SCGB1D2 chr11 62009834 + ALDH3B1 chr11 67785997 + Exonic hg19 BRCA TCGA-A7-A26J-01A 15 63 Out-of-frame Intra-chr q12.3 q13.2 Seq+ 18905 ChimerSeq STARFusion TCGA_RNA-Seq THRAP3-EPHB2 THRAP3 chr1 36725085 + EPHB2 chr1 23107914 + Exonic hg19 BRCA TCGA-A7-A26J-01A 10 45 5'UTR-CDS Intra-chr p34.3 p36.12 Tumor suppressor gene Seq+ 18906 ChimerSeq STARFusion TCGA_RNA-Seq SCGB1D2-ALDH3B1 SCGB1D2 chr11 62009834 + ALDH3B1 chr11 67786001 + Exonic hg19 BRCA TCGA-A7-A26J-01A 3 58 Out-of-frame Intra-chr q12.3 q13.2 Seq+ 18907 ChimerSeq STARFusion TCGA_RNA-Seq BMPR1B-PDLIM5 BMPR1B chr4 96046272 + PDLIM5 chr4 95444875 + Exonic hg19 BRCA TCGA-A7-A26J-01A 7 26 In-Frame Intra-chr q22.3 TKL:STKR q22.3 Seq+ 18908 ChimerSeq STARFusion TCGA_RNA-Seq BMPR1B-PDLIM5 BMPR1B chr4 95917285 + PDLIM5 chr4 95561427 + Exonic hg19 BRCA TCGA-A7-A26J-01A 2 26 5'UTR-CDS Intra-chr q22.3 TKL:STKR q22.3 Seq+ 18909 ChimerSeq STARFusion TCGA_RNA-Seq SCMH1-AGO3 SCMH1 chr1 41626547 - AGO3 chr1 36492715 + Exonic hg19 BRCA TCGA-A7-A26J-01A 2 9 Out-of-frame Intra-chr p34.2 Transcription factor p34.3 Seq+ 18910 ChimerSeq STARFusion TCGA_RNA-Seq PUM2-HS1BP3 PUM2 chr2 20518298 - HS1BP3 chr2 20845265 - Exonic hg19 BRCA TCGA-A8-A06O-01A 22 63 Out-of-frame Intra-chr p24.1 p24.1 Seq+ 18911 ChimerSeq STARFusion TCGA_RNA-Seq ZFP91-RAB6A ZFP91 chr11 58352357 + RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-A8-A06O-01A 5 34 Out-of-frame Intra-chr q12.1 Transcription factor q13.4 Seq+ 18912 ChimerSeq STARFusion TCGA_RNA-Seq USP22-MYH10 USP22 chr17 20919065 - MYH10 chr17 8508300 - Exonic hg19 BRCA TCGA-A8-A06O-01A 8 8 Out-of-frame Intra-chr p11.2 p13.1 Seq+ 18913 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0247-RAD51B KIAA0247 chr14 70078545 + RAD51B chr14 68758601 + Exonic hg19 BRCA TCGA-A8-A06O-01A 4 18 5'UTR-CDS Intra-chr q24.1 Seq+ 18914 ChimerSeq STARFusion TCGA_RNA-Seq IFITM10-DENND5A IFITM10 chr11 1768897 - DENND5A chr11 9215228 - Exonic hg19 BRCA TCGA-A8-A06O-01A 5 12 Out-of-frame Intra-chr p15.4 Seq+ 18915 ChimerSeq STARFusion TCGA_RNA-Seq PRIM2-MAD2L1BP PRIM2 chr6 57246966 + MAD2L1BP chr6 43607758 + Exonic hg19 BRCA TCGA-A8-A06O-01A 6 7 In-Frame Intra-chr p11.2 p21.1 Seq+ 18916 ChimerSeq STARFusion TCGA_RNA-Seq IFITM10-DENND5A IFITM10 chr11 1768987 - DENND5A chr11 9215228 - Exonic hg19 BRCA TCGA-A8-A06O-01A 2 12 Out-of-frame Intra-chr p15.4 Seq+ 18917 ChimerSeq STARFusion TCGA_RNA-Seq H2AFY-CNOT6 H2AFY chr5 134688636 - CNOT6 chr5 179991489 + Exonic hg19 BRCA TCGA-E2-A15E-01A 7 28 In-Frame Intra-chr q31.1 q35.3 Seq+ 18918 ChimerSeq STARFusion TCGA_RNA-Seq SUFU-GBF1 SUFU chr10 104309863 + GBF1 chr10 104111013 + Exonic hg19 BRCA TCGA-E2-A15E-01A 7 8 In-Frame Intra-chr q24.32 Oncogene Tumor suppressor gene q24.32 Seq+ 18919 ChimerSeq STARFusion TCGA_RNA-Seq CANX-RUFY1 CANX chr5 179155785 + RUFY1 chr5 179023563 + Exonic hg19 BRCA TCGA-E2-A15E-01A 5 11 3'UTR-CDS Intra-chr 18920 ChimerSeq STARFusion TCGA_RNA-Seq WAC-LRRC37A6P WAC chr10 28824686 + LRRC37A6P chr10 27535626 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 32 115 CDS-3'UTR Intra-chr p12.1 p12.1 Seq+ 18921 ChimerSeq STARFusion TCGA_RNA-Seq WSB2-VSIG10 WSB2 chr12 118490115 - VSIG10 chr12 118520234 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 14 54 Out-of-frame Intra-chr q24.23 q24.23 Seq+ 18922 ChimerSeq STARFusion TCGA_RNA-Seq PHTF2-RAB1A PHTF2 chr7 77469617 + RAB1A chr2 65316204 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 17 26 In-Frame Inter-chr q11.23 p14 Seq+ 18923 ChimerSeq STARFusion TCGA_RNA-Seq HERC4-RUFY2 HERC4 chr10 69792535 - RUFY2 chr10 70105668 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 16 29 In-Frame Intra-chr q21.3 q21.3 Seq+ 18924 ChimerSeq STARFusion TCGA_RNA-Seq TMEM245-FRRS1L TMEM245 chr9 111868788 - FRRS1L chr9 111912000 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 10 33 In-Frame Intra-chr q31.3 q31.3 Seq+ 18925 ChimerSeq STARFusion TCGA_RNA-Seq ZKSCAN5-SMO ZKSCAN5 chr7 99110214 + SMO chr7 128843225 + Exonic hg19 BRCA TCGA-AR-A0U4-01A 8 41 In-Frame Intra-chr q22.1 Transcription factor q32.1 Oncogene Seq+ 18926 ChimerSeq STARFusion TCGA_RNA-Seq PRMT2-DIP2A PRMT2 chr21 48064400 + DIP2A chr21 47985626 + Exonic hg19 BRCA TCGA-AR-A0U4-01A 12 23 In-Frame Intra-chr q22.3 q22.3 Seq+ 18927 ChimerSeq STARFusion TCGA_RNA-Seq WSB2-VSIG10 WSB2 chr12 118490115 - VSIG10 chr12 118517411 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 2 54 Out-of-frame Intra-chr q24.23 q24.23 Seq+ 18928 ChimerSeq STARFusion TCGA_RNA-Seq RAB1A-PHTF2 RAB1A chr2 65325105 - PHTF2 chr7 77522925 + Exonic hg19 BRCA TCGA-AR-A0U4-01A 7 28 In-Frame Inter-chr p14 q11.23 Seq+ 18929 ChimerSeq STARFusion TCGA_RNA-Seq RAB1A-PHTF2 RAB1A chr2 65318117 - PHTF2 chr7 77522925 + Exonic hg19 BRCA TCGA-AR-A0U4-01A 5 28 In-Frame Inter-chr p14 q11.23 Seq+ 18930 ChimerSeq STARFusion TCGA_RNA-Seq FTSJ3-SCN4A FTSJ3 chr17 61897439 - SCN4A chr17 62019353 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 6 10 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 18931 ChimerSeq STARFusion TCGA_RNA-Seq AGSK1-FSD2 AGSK1 chr15 83182694 - FSD2 chr15 83434783 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 3 13 3'UTR-CDS Intra-chr q25.2 18932 ChimerSeq STARFusion TCGA_RNA-Seq AGSK1-FSD2 AGSK1 chr15 83182644 - FSD2 chr15 83434783 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 3 13 3'UTR-CDS Intra-chr q25.2 18933 ChimerSeq STARFusion TCGA_RNA-Seq LIMA1-TRAPPC9 LIMA1 chr12 50642416 - TRAPPC9 chr8 140999044 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 4 9 In-Frame Inter-chr q13.12 Tumor suppressor gene q24.3 Seq+ 18934 ChimerSeq STARFusion TCGA_RNA-Seq LOC727849-FSD2 LOC727849 chr15 83182694 - FSD2 chr15 83434783 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 3 13 3'UTR-CDS Intra-chr q25.2 18935 ChimerSeq STARFusion TCGA_RNA-Seq LOC727849-FSD2 LOC727849 chr15 83182644 - FSD2 chr15 83434783 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 3 13 3'UTR-CDS Intra-chr q25.2 18936 ChimerSeq STARFusion TCGA_RNA-Seq NEK7-CRB1 NEK7 chr1 198126406 + CRB1 chr1 197297552 + Exonic hg19 BRCA TCGA-AR-A0U4-01A 4 6 5'UTR-5'UTR Intra-chr q31.3 Other:NEK q31.3 Seq+ 18937 ChimerSeq STARFusion TCGA_RNA-Seq AGSK1-FSD2 AGSK1 chr15 83182644 - FSD2 chr15 83440980 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 2 13 3'UTR-CDS Intra-chr q25.2 18938 ChimerSeq STARFusion TCGA_RNA-Seq LOC727849-FSD2 LOC727849 chr15 83182644 - FSD2 chr15 83440980 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 2 13 3'UTR-CDS Intra-chr q25.2 18939 ChimerSeq STARFusion TCGA_RNA-Seq CP-WWTR1 CP chr3 148905839 - WWTR1 chr3 149387678 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 2 12 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 18940 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-MATR3 ANKHD1 chr5 139866645 + MATR3 chr5 138642928 + Exonic hg19 BRCA TCGA-AR-A0U4-01A 3 7 CDS-5'UTR Intra-chr q31.3 q31.2 18941 ChimerSeq STARFusion TCGA_RNA-Seq NASP-ZCCHC17 NASP chr1 46081143 + ZCCHC17 chr1 31782891 + Exonic hg19 BRCA TCGA-AR-A0U4-01A 3 4 CDS-5'UTR Intra-chr p34.1 p35.2 18942 ChimerSeq STARFusion TCGA_RNA-Seq LRRC16A-MRS2 LRRC16A chr6 25285137 + MRS2 chr6 24405396 + Exonic hg19 BRCA TCGA-AR-A0U4-01A 2 7 Out-of-frame Intra-chr p22.3 Seq+ 18943 ChimerSeq STARFusion TCGA_RNA-Seq CHD2-NFYB CHD2 chr15 93444529 + NFYB chr12 104529310 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 2 0 CDS-5'UTR Inter-chr q26.1 q23.3 Transcription factor 18944 ChimerSeq STARFusion TCGA_RNA-Seq TMEM30A-SMAP1 TMEM30A chr6 75994118 - SMAP1 chr6 71546644 + Exonic hg19 BRCA TCGA-AR-A0U4-01A 2 0 In-Frame Intra-chr q14.1 q13 18945 ChimerSeq STARFusion TCGA_RNA-Seq LOC146880-CDK12 LOC146880 chr17 62747925 - CDK12 chr17 37627132 + Exonic hg19 BRCA TCGA-E2-A3DX-01A 2 3 3'UTR-CDS Intra-chr q12 Oncogene 18946 ChimerSeq STARFusion TCGA_RNA-Seq TDG-STAB2 TDG chr12 104359838 + STAB2 chr12 104155078 + Exonic hg19 BRCA TCGA-AO-A1KQ-01A 5 13 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 18947 ChimerSeq STARFusion TCGA_RNA-Seq TRPC4AP-SPG20OS TRPC4AP chr20 33596467 - SPG20OS chr13 36934791 + Exonic hg19 BRCA TCGA-AO-A1KQ-01A 5 12 CDS-5'UTR Inter-chr q11.22 Seq+ 18948 ChimerSeq STARFusion TCGA_RNA-Seq BRCA2-ATP8A2 BRCA2 chr13 32953652 + ATP8A2 chr13 26501249 + Exonic hg19 BRCA TCGA-AO-A1KQ-01A 4 12 Out-of-frame Intra-chr q13.1 Oncogene Tumor suppressor gene q12.13 Seq+ 18949 ChimerSeq STARFusion TCGA_RNA-Seq LONP1-ZNF780B LONP1 chr19 5707071 - ZNF780B chr19 40542533 - Exonic hg19 BRCA TCGA-AC-A2BK-01A 19 74 Out-of-frame Intra-chr p13.3 Transcription factor Seq+ 18950 ChimerSeq STARFusion TCGA_RNA-Seq ABTB2-TYR ABTB2 chr11 34378248 - TYR chr11 89028311 + Exonic hg19 BRCA TCGA-AC-A2BK-01A 9 45 In-Frame Intra-chr p13 q14.3 Seq+ 18951 ChimerSeq STARFusion TCGA_RNA-Seq ABTB2-TYR ABTB2 chr11 34378248 - TYR chr11 89017941 + Exonic hg19 BRCA TCGA-AC-A2BK-01A 8 45 Out-of-frame Intra-chr p13 q14.3 Seq+ 18952 ChimerSeq STARFusion TCGA_RNA-Seq CAPRIN1-CAT CAPRIN1 chr11 34093534 + CAT chr11 34470739 + Exonic hg19 BRCA TCGA-AC-A2BK-01A 10 27 In-Frame Intra-chr p13 p13 Tumor suppressor gene Seq+ 18953 ChimerSeq STARFusion TCGA_RNA-Seq MSL2-STAG1 MSL2 chr3 135913814 - STAG1 chr3 136349823 - Exonic hg19 BRCA TCGA-AC-A2BK-01A 3 48 CDS-5'UTR Intra-chr q22.3 q22.3 Seq+ 18954 ChimerSeq STARFusion TCGA_RNA-Seq LOC150381-COL4A1 LOC150381 chr22 46449800 + COL4A1 chr13 110895081 - Exonic hg19 BRCA TCGA-AC-A2BK-01A 6 24 5'UTR-CDS Inter-chr q34 18955 ChimerSeq STARFusion TCGA_RNA-Seq MYO10-LOC285696 MYO10 chr5 16877718 - LOC285696 chr5 17162674 - Exonic hg19 BRCA TCGA-AC-A2BK-01A 8 15 CDS-3'UTR Intra-chr p15.1 18956 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-TPGS1 SBNO2 chr19 1149368 - TPGS1 chr19 518889 + Exonic hg19 BRCA TCGA-AC-A2BK-01A 3 22 In-Frame Intra-chr p13.3 p13.3 18957 ChimerSeq STARFusion TCGA_RNA-Seq FAM108B1-TMEM2 FAM108B1 chr9 74525550 - TMEM2 chr9 74365301 - Exonic hg19 BRCA TCGA-AC-A2BK-01A 2 21 5'UTR-5'UTR Intra-chr q21.13 18958 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57987972 + VMP1 chr17 57886157 + Exonic hg19 BRCA TCGA-AC-A2BK-01A 4 13 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 18959 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57886157 + Exonic hg19 BRCA TCGA-AC-A2BK-01A 2 13 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 18960 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-RSBN1L PTPN12 chr7 77166962 + RSBN1L chr7 77365727 + Exonic hg19 BRCA TCGA-AC-A2BK-01A 2 12 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 18961 ChimerSeq STARFusion TCGA_RNA-Seq MAGT1-ATRX MAGT1 chrX 77150806 - ATRX chrX 76972720 - Exonic hg19 BRCA TCGA-AC-A2BK-01A 3 5 Out-of-frame Intra-chr q21.1 q21.1 Oncogene 18962 ChimerSeq STARFusion TCGA_RNA-Seq XPO1-USP34 XPO1 chr2 61749746 - USP34 chr2 61647968 - Exonic hg19 BRCA TCGA-AC-A2BK-01A 3 5 In-Frame Intra-chr p15 Oncogene p15 Seq+ 18963 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-ADARB1 SBNO2 chr19 1149368 - ADARB1 chr21 46645462 + Exonic hg19 BRCA TCGA-AC-A2BK-01A 3 2 Out-of-frame Inter-chr p13.3 q22.3 Tumor suppressor gene Seq+ 18964 ChimerSeq STARFusion TCGA_RNA-Seq USP7-CARHSP1 USP7 chr16 9057064 - CARHSP1 chr16 8953192 - Exonic hg19 BRCA TCGA-AC-A2BK-01A 2 6 CDS-5'UTR Intra-chr p13.2 p13.2 18965 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R2A-APP PPP2R2A chr8 26151256 + APP chr21 27484463 - Exonic hg19 BRCA TCGA-AC-A2BK-01A 2 5 Out-of-frame Inter-chr p21.2 q21.3 Seq+ 18966 ChimerSeq STARFusion TCGA_RNA-Seq DEPDC1B-PDE4D DEPDC1B chr5 59982789 - PDE4D chr5 59481514 - Exonic hg19 BRCA TCGA-AC-A2BK-01A 2 4 CDS-5'UTR Intra-chr q12.1 q12.1 Seq+ 18967 ChimerSeq STARFusion TCGA_RNA-Seq DBNDD1-TPGS1 DBNDD1 chr16 90075192 - TPGS1 chr19 518889 + Exonic hg19 BRCA TCGA-AC-A2BK-01A 2 3 Out-of-frame Inter-chr q24.3 p13.3 Seq+ 18968 ChimerSeq STARFusion TCGA_RNA-Seq UBAP1-SEPT9 UBAP1 chr9 34179238 + SEPT9 chr17 75483506 + Exonic hg19 BRCA TCGA-AC-A2BK-01A 2 1 In-Frame Inter-chr p13.3 18969 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80963762 - MRPS28 chr8 80831383 - Exonic hg19 BRCA TCGA-BH-A18M-01A 2 0 In-Frame Intra-chr q21.13 q21.13 18970 ChimerSeq STARFusion TCGA_RNA-Seq SHFM1-ACN9 SHFM1 chr7 96324110 - ACN9 chr7 96810324 + Exonic hg19 BRCA TCGA-BH-A0E1-01A 2 0 Out-of-frame Intra-chr 18971 ChimerSeq STARFusion TCGA_RNA-Seq SLC19A2-KDM4C SLC19A2 chr1 169446393 - KDM4C chr9 7046862 + Exonic hg19 BRCA TCGA-BH-A0E1-01A 2 0 In-Frame Inter-chr q24.2 p24.1 18972 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106111129 - Exonic hg19 BRCA TCGA-AN-A0XS-01A 110 1 Out-of-frame Inter-chr q37.3 18973 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106136184 - Exonic hg19 BRCA TCGA-AN-A0XS-01A 87 1 Out-of-frame Inter-chr q37.3 18974 ChimerSeq STARFusion TCGA_RNA-Seq RANBP2-IGH@ RANBP2 chr2 109383275 + IGH@ chr14 106331666 - Exonic hg19 BRCA TCGA-AN-A0XS-01A 52 2 Out-of-frame Inter-chr q13 32.33 18975 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106209410 - Exonic hg19 BRCA TCGA-AN-A0XS-01A 20 1 Out-of-frame Inter-chr q37.3 18976 ChimerSeq STARFusion TCGA_RNA-Seq SNORA70-IGH@ SNORA70 chr5 170793260 + IGH@ chr14 106209410 - Exonic hg19 BRCA TCGA-AN-A0XS-01A 15 0 Out-of-frame Inter-chr p11.2 32.33 18977 ChimerSeq STARFusion TCGA_RNA-Seq SNORA70-IGHG1 SNORA70 chr5 170793260 + IGHG1 chr14 106209410 - Exonic hg19 BRCA TCGA-AN-A0XS-01A 15 0 Out-of-frame Inter-chr p11.2 q32.33 18978 ChimerSeq STARFusion TCGA_RNA-Seq SNORA70-IGH@ SNORA70 chr5 170793260 + IGH@ chr14 106237745 - Exonic hg19 BRCA TCGA-AN-A0XS-01A 14 0 Out-of-frame Inter-chr p11.2 32.33 18979 ChimerSeq STARFusion TCGA_RNA-Seq SNORA70-IGHG1 SNORA70 chr5 170793263 + IGHG1 chr14 106237742 - Exonic hg19 BRCA TCGA-AN-A0XS-01A 13 0 Out-of-frame Inter-chr p11.2 q32.33 18980 ChimerSeq STARFusion TCGA_RNA-Seq RPS7-IGL@ RPS7 chr2 3624102 + IGL@ chr22 23241801 + Exonic hg19 BRCA TCGA-AN-A0XS-01A 9 1 Out-of-frame Inter-chr p25.3 q11.22 18981 ChimerSeq STARFusion TCGA_RNA-Seq SNORA70-IGH@ SNORA70 chr5 170793263 + IGH@ chr14 106136181 - Exonic hg19 BRCA TCGA-AN-A0XS-01A 8 0 Out-of-frame Inter-chr p11.2 32.33 18982 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-C17orf98 STARD3 chr17 37810003 + C17orf98 chr17 36991599 - Exonic hg19 BRCA TCGA-D8-A1XJ-01A 50 179 Out-of-frame Intra-chr q12 q12 Seq+ 18983 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-C17orf98 STARD3 chr17 37810003 + C17orf98 chr17 36993493 - Exonic hg19 BRCA TCGA-D8-A1XJ-01A 22 179 In-Frame Intra-chr q12 q12 Seq+ 18984 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0319L-PHC2 KIAA0319L chr1 35907847 - PHC2 chr1 33790620 - Exonic hg19 BRCA TCGA-D8-A1XJ-01A 37 110 Out-of-frame Intra-chr p34.3 p35.1 Seq+ 18985 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-RPL23 FBXL20 chr17 37557614 - RPL23 chr17 37009358 - Exonic hg19 BRCA TCGA-D8-A1XJ-01A 33 58 Out-of-frame Intra-chr q12 q12 Seq+ 18986 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0319L-PHC2 KIAA0319L chr1 35907847 - PHC2 chr1 33793028 - Exonic hg19 BRCA TCGA-D8-A1XJ-01A 14 110 Out-of-frame Intra-chr p34.3 p35.1 Seq+ 18987 ChimerSeq STARFusion TCGA_RNA-Seq GNAS-PVRL2 GNAS chr20 57470739 + PVRL2 chr19 45385468 + Exonic hg19 BRCA TCGA-D8-A1XJ-01A 23 51 Out-of-frame Inter-chr q13.32 Oncogene Seq+ 18988 ChimerSeq STARFusion TCGA_RNA-Seq MED1-PIP4K2B MED1 chr17 37607291 - PIP4K2B chr17 36943173 - Exonic hg19 BRCA TCGA-D8-A1XJ-01A 2 95 Out-of-frame Intra-chr q12 Tumor suppressor gene q12 Seq+ 18989 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-MED1 ERBB2 chr17 37873733 + MED1 chr17 37571592 - Exonic hg19 BRCA TCGA-D8-A1XJ-01A 14 17 Out-of-frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 18990 ChimerSeq STARFusion TCGA_RNA-Seq THRA-TADA2A THRA chr17 38219345 + TADA2A chr17 35771356 + Exonic hg19 BRCA TCGA-D8-A1XJ-01A 11 21 5'UTR-5'UTR Intra-chr q21.1 Tumor suppressor gene Transcription factor q12 Seq+ 18991 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-LOC643802 CREBBP chr16 3900298 - LOC643802 chr16 53404207 - Exonic hg19 BRCA TCGA-D8-A1XJ-01A 6 37 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene 18992 ChimerSeq STARFusion TCGA_RNA-Seq ACSS1-PHACTR3 ACSS1 chr20 25038405 - PHACTR3 chr20 58318162 + Exonic hg19 BRCA TCGA-D8-A1XJ-01A 8 21 In-Frame Intra-chr p11.21 q13.32 Seq+ 18993 ChimerSeq STARFusion TCGA_RNA-Seq PIP4K2B-FBXL20 PIP4K2B chr17 36955519 - FBXL20 chr17 37499494 - Exonic hg19 BRCA TCGA-D8-A1XJ-01A 3 19 In-Frame Intra-chr q12 q12 Seq+ 18994 ChimerSeq STARFusion TCGA_RNA-Seq RCBTB2-RB1 RCBTB2 chr13 49070255 - RB1 chr13 48939061 + Exonic hg19 BRCA TCGA-D8-A1XJ-01A 3 13 Out-of-frame Intra-chr q14.2 q14.2 Oncogene Tumor suppressor gene Seq+ 18995 ChimerSeq STARFusion TCGA_RNA-Seq STK24-DOCK9 STK24 chr13 99171497 - DOCK9 chr13 99452732 - Exonic hg19 BRCA TCGA-D8-A1XJ-01A 2 17 Out-of-frame Intra-chr q32.2 q32.3 Seq+ 18996 ChimerSeq STARFusion TCGA_RNA-Seq ACACA-MED24 ACACA chr17 35766352 - MED24 chr17 38209888 - Exonic hg19 BRCA TCGA-D8-A1XJ-01A 4 7 5'UTR-5'UTR Intra-chr q21.1 Seq+ 18997 ChimerSeq STARFusion TCGA_RNA-Seq MED1-LOC100131347 MED1 chr17 37599803 - LOC100131347 chr17 37219675 + Exonic hg19 BRCA TCGA-D8-A1XJ-01A 2 11 CDS-5'UTR Intra-chr q12 Tumor suppressor gene 18998 ChimerSeq STARFusion TCGA_RNA-Seq ACACA-MED24 ACACA chr17 35766352 - MED24 chr17 38209910 - Exonic hg19 BRCA TCGA-D8-A1XJ-01A 2 7 5'UTR-5'UTR Intra-chr q21.1 Seq+ 18999 ChimerSeq STARFusion TCGA_RNA-Seq RPL23-PSMB3 RPL23 chr17 37008942 - PSMB3 chr17 36912155 + Exonic hg19 BRCA TCGA-D8-A1XJ-01A 3 2 Out-of-frame Intra-chr q12 19000 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-HIAT1 ERBB2 chr17 37882868 + HIAT1 chr1 100534041 + Exonic hg19 BRCA TCGA-D8-A1XJ-01A 3 1 Out-of-frame Inter-chr q12 Oncogene 19001 ChimerSeq STARFusion TCGA_RNA-Seq SRSF5-AKR1A1 SRSF5 chr14 70235613 + AKR1A1 chr1 46035563 + Exonic hg19 BRCA TCGA-D8-A1XJ-01A 2 0 Out-of-frame Inter-chr q24.1 p34.1 19002 ChimerSeq STARFusion TCGA_RNA-Seq TSKU-GNAS TSKU chr11 76494448 + GNAS chr20 57470667 + Exonic hg19 BRCA TCGA-D8-A1XJ-01A 2 0 5'UTR-5'UTR Inter-chr q13.5 q13.32 Oncogene 19003 ChimerSeq STARFusion TCGA_RNA-Seq BAHCC1-BAIAP2 BAHCC1 chr17 79373717 + BAIAP2 chr17 79027468 + Exonic hg19 BRCA TCGA-D8-A27E-01A 2 9 Out-of-frame Intra-chr q25.3 q25.3 19004 ChimerSeq STARFusion TCGA_RNA-Seq LRP1-CARTPT LRP1 chr12 57552319 + CARTPT chr5 71015104 + Exonic hg19 BRCA TCGA-D8-A27E-01A 3 4 Out-of-frame Inter-chr q13.3 q13.2 19005 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1211-STMN1 KIAA1211 chr4 57045596 + STMN1 chr1 26231229 - Exonic hg19 BRCA TCGA-E2-A14Q-01A 18 36 5'UTR-5'UTR Inter-chr q12 p36.11 Seq+ 19006 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L3-LOC100507412 SIPA1L3 chr19 38610522 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-E2-A14Q-01A 2 27 CDS-5'UTR Inter-chr q13.13 19007 ChimerSeq STARFusion TCGA_RNA-Seq FRAS1-DCK FRAS1 chr4 79373508 + DCK chr4 71888084 + Exonic hg19 BRCA TCGA-E2-A14Q-01A 5 5 Out-of-frame Intra-chr q21.21 q13.3 Seq+ 19008 ChimerSeq STARFusion TCGA_RNA-Seq ANXA2-TMEM43 ANXA2 chr15 60641349 - TMEM43 chr3 14184483 + Exonic hg19 BRCA TCGA-E2-A14Q-01A 3 0 Out-of-frame Inter-chr q22.2 p25.1 19009 ChimerSeq STARFusion TCGA_RNA-Seq BCL2L11-NDUFS4 BCL2L11 chr2 111881716 + NDUFS4 chr5 52978948 + Exonic hg19 BRCA TCGA-E2-A14Q-01A 2 0 In-Frame Inter-chr q13 Tumor suppressor gene q11.2 19010 ChimerSeq STARFusion TCGA_RNA-Seq CHD8-TOX4 CHD8 chr14 21898960 - TOX4 chr14 21957332 + Exonic hg19 BRCA TCGA-AO-A128-01A 24 85 In-Frame Intra-chr q11.2 q11.2 Seq+ 19011 ChimerSeq STARFusion TCGA_RNA-Seq CHD8-TOX4 CHD8 chr14 21899970 - TOX4 chr14 21957332 + Exonic hg19 BRCA TCGA-AO-A128-01A 7 85 In-Frame Intra-chr q11.2 q11.2 Seq+ 19012 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80950355 - MRPS28 chr8 80831383 - Exonic hg19 BRCA TCGA-AO-A128-01A 3 15 Out-of-frame Intra-chr q21.13 q21.13 19013 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80954857 - MRPS28 chr8 80831385 - Exonic hg19 BRCA TCGA-AO-A128-01A 3 15 Out-of-frame Intra-chr q21.13 q21.13 19014 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD1-ST18 PCMTD1 chr8 52811490 - ST18 chr8 53079546 - Exonic hg19 BRCA TCGA-AO-A128-01A 2 13 5'UTR-CDS Intra-chr q11.23 q11.23 Transcription factor Seq+ 19015 ChimerSeq STARFusion TCGA_RNA-Seq USP37-RNF25 USP37 chr2 219394679 - RNF25 chr2 219533402 - Exonic hg19 BRCA TCGA-AO-A128-01A 2 8 In-Frame Intra-chr q35 q35 Seq+ 19016 ChimerSeq STARFusion TCGA_RNA-Seq LUC7L3-ABCC3 LUC7L3 chr17 48822174 + ABCC3 chr17 48750332 + Exonic hg19 BRCA TCGA-AO-A128-01A 2 4 In-Frame Intra-chr q21.33 q21.33 Seq+ 19017 ChimerSeq STARFusion TCGA_RNA-Seq C1orf198-AGT C1orf198 chr1 230979100 - AGT chr1 230846599 - Exonic hg19 BRCA TCGA-AO-A128-01A 2 1 CDS-5'UTR Intra-chr q42.2 q42.2 Seq+ 19018 ChimerSeq STARFusion TCGA_RNA-Seq DZIP1-NCAPG2 DZIP1 chr13 96264291 - NCAPG2 chr7 158457442 - Exonic hg19 BRCA TCGA-AO-A128-01A 2 0 In-Frame Inter-chr q32.1 Transcription factor q36.3 19019 ChimerSeq STARFusion TCGA_RNA-Seq HOMEZ-MYH7 HOMEZ chr14 23755122 - MYH7 chr14 23902949 - Exonic hg19 BRCA TCGA-AO-A128-01A 2 0 CDS-5'UTR Intra-chr q11.2 Transcription factor q11.2 19020 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1598-CUZD1 KIAA1598 chr10 118764533 - CUZD1 chr10 124615302 - Exonic hg19 BRCA TCGA-LL-A73Z-01A 3 18 5'UTR-5'UTR Intra-chr q26.13 19021 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1598-FAM24B KIAA1598 chr10 118764533 - FAM24B chr10 124615302 - Exonic hg19 BRCA TCGA-LL-A73Z-01A 3 18 5'UTR-5'UTR Intra-chr q26.13 Seq+ 19022 ChimerSeq STARFusion TCGA_RNA-Seq NSL1-TMEM206 NSL1 chr1 212955714 - TMEM206 chr1 212560442 - Exonic hg19 BRCA TCGA-BH-A18J-01A 18 58 In-Frame Intra-chr q32.3 q32.3 Seq+ 19023 ChimerSeq STARFusion TCGA_RNA-Seq PTPRF-LEFTY2 PTPRF chr1 44019612 + LEFTY2 chr1 226127702 - Exonic hg19 BRCA TCGA-BH-A18J-01A 20 48 In-Frame Intra-chr p34.2 q42.12 Tumor suppressor gene Seq+ 19024 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC14-SNX7 ZCCHC14 chr16 87493614 - SNX7 chr1 99225610 + Exonic hg19 BRCA TCGA-BH-A18J-01A 11 53 Out-of-frame Inter-chr q24.2 p21.3 Seq+ 19025 ChimerSeq STARFusion TCGA_RNA-Seq KDM4A-CREB3L4 KDM4A chr1 44133690 + CREB3L4 chr1 153945220 + Exonic hg19 BRCA TCGA-BH-A18J-01A 10 46 Out-of-frame Intra-chr p34.2 q21.3 Transcription factor Seq+ 19026 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC14-SNX7 ZCCHC14 chr16 87493614 - SNX7 chr1 99203793 + Exonic hg19 BRCA TCGA-BH-A18J-01A 6 53 Out-of-frame Inter-chr q24.2 p21.3 Seq+ 19027 ChimerSeq STARFusion TCGA_RNA-Seq PTPRF-LEFTY1 PTPRF chr1 44019612 + LEFTY1 chr1 226075732 - Exonic hg19 BRCA TCGA-BH-A18J-01A 10 32 In-Frame Intra-chr p34.2 q42.12 Tumor suppressor gene 19028 ChimerSeq STARFusion TCGA_RNA-Seq VGLL4-SH3BP5 VGLL4 chr3 11744445 - SH3BP5 chr3 15311384 - Exonic hg19 BRCA TCGA-BH-A18J-01A 8 23 Out-of-frame Intra-chr p25.2 p25.1 Seq+ 19029 ChimerSeq STARFusion TCGA_RNA-Seq KDM4A-CREB3L4 KDM4A chr1 44133690 + CREB3L4 chr1 153945671 + Exonic hg19 BRCA TCGA-BH-A18J-01A 2 46 In-Frame Intra-chr p34.2 q21.3 Transcription factor Seq+ 19030 ChimerSeq STARFusion TCGA_RNA-Seq LRRN2-CTSS LRRN2 chr1 204654448 - CTSS chr1 150730456 - Exonic hg19 BRCA TCGA-BH-A18J-01A 7 22 5'UTR-CDS Intra-chr q32.1 q21.3 Seq+ 19031 ChimerSeq STARFusion TCGA_RNA-Seq LRRN2-CTSS LRRN2 chr1 204654448 - CTSS chr1 150738270 - Exonic hg19 BRCA TCGA-BH-A18J-01A 4 22 5'UTR-5'UTR Intra-chr q32.1 q21.3 Seq+ 19032 ChimerSeq STARFusion TCGA_RNA-Seq HIVEP3-CREB3L4 HIVEP3 chr1 42166587 - CREB3L4 chr1 153945671 + Exonic hg19 BRCA TCGA-BH-A18J-01A 3 17 5'UTR-5'UTR Intra-chr p34.2 Tumor suppressor gene Transcription factor q21.3 Transcription factor Seq+ 19033 ChimerSeq STARFusion TCGA_RNA-Seq HIVEP3-CREB3L4 HIVEP3 chr1 42166587 - CREB3L4 chr1 153946096 + Exonic hg19 BRCA TCGA-BH-A18J-01A 2 17 5'UTR-5'UTR Intra-chr p34.2 Tumor suppressor gene Transcription factor q21.3 Transcription factor Seq+ 19034 ChimerSeq STARFusion TCGA_RNA-Seq NFYC-PLXNA2 NFYC chr1 41204620 + PLXNA2 chr1 208391347 - Exonic hg19 BRCA TCGA-BH-A18J-01A 3 3 CDS-5'UTR Intra-chr p34.2 Transcription factor q32.2 Seq+ 19035 ChimerSeq STARFusion TCGA_RNA-Seq BIRC6-TTC27 BIRC6 chr2 32605358 + TTC27 chr2 32897339 + Exonic hg19 BRCA TCGA-BH-A18J-01A 3 2 In-Frame Intra-chr p22.3 p22.3 Seq+ 19036 ChimerSeq STARFusion TCGA_RNA-Seq NR2C2-COLQ NR2C2 chr3 14989413 + COLQ chr3 15531144 - Exonic hg19 BRCA TCGA-BH-A18J-01A 2 3 5'UTR-CDS Intra-chr p25.1 Tumor suppressor gene Transcription factor p25.1 Seq+ 19037 ChimerSeq STARFusion TCGA_RNA-Seq RPAIN-USP6 RPAIN chr17 5326149 + USP6 chr17 5064823 + Exonic hg19 BRCA TCGA-BH-A18J-01A 2 3 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 19038 ChimerSeq STARFusion TCGA_RNA-Seq COL8A1-SLC9A9 COL8A1 chr3 99357508 + SLC9A9 chr3 143214290 - Exonic hg19 BRCA TCGA-BH-A18J-01A 2 0 5'UTR-CDS Intra-chr q12.1 q24 19039 ChimerSeq STARFusion TCGA_RNA-Seq LUC7L-ATXN2L LUC7L chr16 279278 - ATXN2L chr16 28845386 + Exonic hg19 BRCA TCGA-BH-A18J-01A 2 0 Out-of-frame Intra-chr p13.3 p11.2 Seq+ 19040 ChimerSeq STARFusion TCGA_RNA-Seq SNPH-MLLT1 SNPH chr20 1247404 + MLLT1 chr19 6270770 - Exonic hg19 BRCA TCGA-BH-A18J-01A 2 0 5'UTR-CDS Inter-chr p13 p13.3 19041 ChimerSeq STARFusion TCGA_RNA-Seq SHROOM3-GRSF1 SHROOM3 chr4 77507622 + GRSF1 chr4 71702031 - Exonic hg19 BRCA TCGA-E2-A1IO-01A 39 117 CDS-5'UTR Intra-chr q21.1 q13.3 Seq+ 19042 ChimerSeq STARFusion TCGA_RNA-Seq COL1A2-MBNL1 COL1A2 chr7 94027071 + MBNL1 chr3 151987554 + Exonic hg19 BRCA TCGA-E2-A1IO-01A 8 1 Out-of-frame Inter-chr q21.3 q25.1 19043 ChimerSeq STARFusion TCGA_RNA-Seq TRERF1-TMEM132C TRERF1 chr6 42418915 - TMEM132C chr12 129100697 + Exonic hg19 BRCA TCGA-E2-A1IO-01A 2 13 5'UTR-CDS Inter-chr p21.1 Transcription factor q24.32 Seq+ 19044 ChimerSeq STARFusion TCGA_RNA-Seq PREX1-EHBP1 PREX1 chr20 47444179 - EHBP1 chr2 62934032 + Exonic hg19 BRCA TCGA-AO-A1KS-01A 5 18 CDS-5'UTR Inter-chr q13.13 p15 Seq+ 19045 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80954857 - MRPS28 chr8 80831385 - Exonic hg19 BRCA TCGA-AO-A1KS-01A 3 7 Out-of-frame Intra-chr q21.13 q21.13 19046 ChimerSeq STARFusion TCGA_RNA-Seq B3GALTL-USPL1 B3GALTL chr13 31898032 + USPL1 chr13 31216765 + Exonic hg19 BRCA TCGA-AO-A1KS-01A 2 7 Out-of-frame Intra-chr q12.3 19047 ChimerSeq STARFusion TCGA_RNA-Seq ZNF169-UBR7 ZNF169 chr9 97041127 + UBR7 chr14 93676170 + Exonic hg19 BRCA TCGA-E2-A1BD-01A 2 18 In-Frame Inter-chr q22.32 Transcription factor Seq+ 19048 ChimerSeq STARFusion TCGA_RNA-Seq IL4I1-KCNQ2 IL4I1 chr19 50430951 - KCNQ2 chr20 62076717 - Exonic hg19 BRCA TCGA-A2-A3XW-01A 87 174 5'UTR-CDS Inter-chr q13.33 Seq+ 19049 ChimerSeq STARFusion TCGA_RNA-Seq NUP62-KCNQ2 NUP62 chr19 50430951 - KCNQ2 chr20 62076717 - Exonic hg19 BRCA TCGA-A2-A3XW-01A 87 174 5'UTR-CDS Inter-chr q13.33 Seq+ 19050 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL5-RHOG OSBPL5 chr11 3147703 - RHOG chr11 3849436 - Exonic hg19 BRCA TCGA-A2-A3XW-01A 14 31 CDS-5'UTR Intra-chr p15.4 p15.4 Seq+ 19051 ChimerSeq STARFusion TCGA_RNA-Seq STAU1-GPHB5 STAU1 chr20 47790732 - GPHB5 chr14 63779830 - Exonic hg19 BRCA TCGA-A2-A3XW-01A 4 5 5'UTR-CDS Inter-chr q13.13 q23.2 Seq+ 19052 ChimerSeq STARFusion TCGA_RNA-Seq SIX1-CYB5R2 SIX1 chr14 61115348 - CYB5R2 chr11 7689792 - Exonic hg19 BRCA TCGA-A2-A3XW-01A 3 7 Out-of-frame Inter-chr q23.1 Transcription factor p15.4 Tumor suppressor gene Seq+ 19053 ChimerSeq STARFusion TCGA_RNA-Seq KAT6B-CCDC172 KAT6B chr10 76741686 + CCDC172 chr10 118100246 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 113 519 Out-of-frame Intra-chr Oncogene q25.3 Seq+ 19054 ChimerSeq STARFusion TCGA_RNA-Seq KAT6B-CCDC172 KAT6B chr10 76741686 + CCDC172 chr10 118100282 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 21 519 Out-of-frame Intra-chr Oncogene q25.3 Seq+ 19055 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF5-PPAPDC1A RAPGEF5 chr7 22270465 - PPAPDC1A chr10 122334643 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 34 138 Out-of-frame Inter-chr p15.3 Seq+ 19056 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF5-PPAPDC1A RAPGEF5 chr7 22270465 - PPAPDC1A chr10 122348815 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 13 138 Out-of-frame Inter-chr p15.3 Seq+ 19057 ChimerSeq STARFusion TCGA_RNA-Seq STK11-TYK2 STK11 chr19 1207202 + TYK2 chr19 10473333 - Exonic hg19 BRCA TCGA-AQ-A04L-01B 13 47 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.2 TK:JakA Seq+ 19058 ChimerSeq STARFusion TCGA_RNA-Seq ESYT2-CPED1 ESYT2 chr7 158552177 - CPED1 chr7 120704292 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 18 25 Out-of-frame Intra-chr q36.3 q31.31 Seq+ 19059 ChimerSeq STARFusion TCGA_RNA-Seq MOB1B-PPAPDC1A MOB1B chr4 71768267 + PPAPDC1A chr10 122263330 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 13 31 In-Frame Inter-chr q13.3 Tumor suppressor gene Seq+ 19060 ChimerSeq STARFusion TCGA_RNA-Seq STK11-TYK2 STK11 chr19 1207202 + TYK2 chr19 10476574 - Exonic hg19 BRCA TCGA-AQ-A04L-01B 7 47 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.2 TK:JakA Seq+ 19061 ChimerSeq STARFusion TCGA_RNA-Seq GFRA1-DGKB GFRA1 chr10 118029015 - DGKB chr7 14733819 - Exonic hg19 BRCA TCGA-AQ-A04L-01B 9 36 Out-of-frame Inter-chr q25.3 p21.2 Seq+ 19062 ChimerSeq STARFusion TCGA_RNA-Seq UTRN-LYRM4 UTRN chr6 144795895 + LYRM4 chr6 5109725 - Exonic hg19 BRCA TCGA-AQ-A04L-01B 9 31 In-Frame Intra-chr q24.2 p25.1 Seq+ 19063 ChimerSeq STARFusion TCGA_RNA-Seq EIF3H-EFR3A EIF3H chr8 117668095 - EFR3A chr8 133025212 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 11 18 CDS-3'UTR Intra-chr q24.11 q24.22 Seq+ 19064 ChimerSeq STARFusion TCGA_RNA-Seq CDH1-NPFFR2 CDH1 chr16 68772314 + NPFFR2 chr4 73003757 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 8 25 In-Frame Inter-chr q22.1 Oncogene Tumor suppressor gene q13.3 Seq+ 19065 ChimerSeq STARFusion TCGA_RNA-Seq LPP-SPATA16 LPP chr3 188584166 + SPATA16 chr3 172737365 - Exonic hg19 BRCA TCGA-AQ-A04L-01B 10 11 In-Frame Intra-chr q27.3 Oncogene q26.31 Seq+ 19066 ChimerSeq STARFusion TCGA_RNA-Seq ANK3-CHN2 ANK3 chr10 62021617 - CHN2 chr7 29433295 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 5 29 In-Frame Inter-chr q21.2 p14.3 Seq+ 19067 ChimerSeq STARFusion TCGA_RNA-Seq CDH1-NPFFR2 CDH1 chr16 68772314 + NPFFR2 chr4 72994302 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 6 25 Out-of-frame Inter-chr q22.1 Oncogene Tumor suppressor gene q13.3 Seq+ 19068 ChimerSeq STARFusion TCGA_RNA-Seq FGFR2-AP1M1 FGFR2 chr10 123256046 - AP1M1 chr19 16314270 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 5 9 In-Frame Inter-chr q26.13 TK:FGFR Oncogene p13.11 Seq+ 19069 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-UTRN ESR1 chr6 152129499 + UTRN chr6 144765417 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 4 12 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q24.2 Seq+ 19070 ChimerSeq STARFusion TCGA_RNA-Seq NFIC-RPS3 NFIC chr19 3463200 + RPS3 chr11 75132771 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 3 15 3'UTR-3'UTR Inter-chr p13.3 Transcription factor q13.4 Seq+ 19071 ChimerSeq STARFusion TCGA_RNA-Seq CDK1-WDR11 CDK1 chr10 62538328 + WDR11 chr10 122659541 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 4 9 5'UTR-CDS Intra-chr q21.2 q26.12 Tumor suppressor gene Seq+ 19072 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-UTRN ESR1 chr6 152129467 + UTRN chr6 144765417 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 3 12 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q24.2 Seq+ 19073 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL3-CORIN OSBPL3 chr7 24931996 - CORIN chr4 47746600 - Exonic hg19 BRCA TCGA-AQ-A04L-01B 4 8 Out-of-frame Inter-chr p15.3 p12 Seq+ 19074 ChimerSeq STARFusion TCGA_RNA-Seq CBWD6-NFIX CBWD6 chr9 69218510 - NFIX chr19 13205449 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 5 0 CDS-3'UTR Inter-chr p11.2 p13.13 Transcription factor 19075 ChimerSeq STARFusion TCGA_RNA-Seq TNS3-ZNRF2 TNS3 chr7 47474880 - ZNRF2 chr7 30401993 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 2 11 Out-of-frame Intra-chr p12.3 p14.3 Seq+ 19076 ChimerSeq STARFusion TCGA_RNA-Seq FAM213A-IGJ FAM213A chr10 82180401 + IGJ chr4 71527932 - Exonic hg19 BRCA TCGA-AQ-A04L-01B 3 5 In-Frame Inter-chr q23.1 19077 ChimerSeq STARFusion TCGA_RNA-Seq ANK3-SP2 ANK3 chr10 62374944 - SP2 chr17 45992678 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 2 7 Out-of-frame Inter-chr q21.2 q21.32 Transcription factor Seq+ 19078 ChimerSeq STARFusion TCGA_RNA-Seq PAK1-ARHGEF18 PAK1 chr11 77043775 - ARHGEF18 chr19 7521213 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 2 7 Out-of-frame Inter-chr q14.1 STE:STE20 p13.2 Seq+ 19079 ChimerSeq STARFusion TCGA_RNA-Seq FAM221A-MUC4 FAM221A chr7 23729078 + MUC4 chr3 195481243 - Exonic hg19 BRCA TCGA-AQ-A04L-01B 2 3 Out-of-frame Inter-chr p15.3 19080 ChimerSeq STARFusion TCGA_RNA-Seq PTPRS-RSF1 PTPRS chr19 5207933 - RSF1 chr11 77396204 - Exonic hg19 BRCA TCGA-AQ-A04L-01B 2 2 Out-of-frame Inter-chr p13.3 q14.1 19081 ChimerSeq STARFusion TCGA_RNA-Seq DCAKD-NMT1 DCAKD chr17 43128921 - NMT1 chr17 43159012 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 2 0 5'UTR-CDS Intra-chr q21.31 q21.31 19082 ChimerSeq STARFusion TCGA_RNA-Seq HSP90AA1-ZC3H8 HSP90AA1 chr14 102549371 - ZC3H8 chr2 112990948 - Exonic hg19 BRCA TCGA-AQ-A04L-01B 2 0 In-Frame Inter-chr q32.31 Oncogene q14.1 Transcription factor 19083 ChimerSeq STARFusion TCGA_RNA-Seq NUMA1-PITPNM1 NUMA1 chr11 71718235 - PITPNM1 chr11 67265793 - Exonic hg19 BRCA TCGA-E2-A107-01A 21 88 Out-of-frame Intra-chr q13.4 Oncogene q13.2 Seq+ 19084 ChimerSeq STARFusion TCGA_RNA-Seq BPIFA4P-RALY BPIFA4P chr20 31781447 + RALY chr20 32619328 + Exonic hg19 BRCA TCGA-E2-A107-01A 3 7 5'UTR-5'UTR Intra-chr q11.21 q11.22 Seq+ 19085 ChimerSeq STARFusion TCGA_RNA-Seq ATF7-ATP5G2 ATF7 chr12 53994737 - ATP5G2 chr12 54063732 - Exonic hg19 BRCA TCGA-OL-A66P-01A 35 181 In-Frame Intra-chr q13.13 Transcription factor q13.13 Seq+ 19086 ChimerSeq STARFusion TCGA_RNA-Seq TMEM135-CHEK1 TMEM135 chr11 86802437 + CHEK1 chr11 125545823 + Exonic hg19 BRCA TCGA-OL-A66P-01A 14 86 CDS-3'UTR Intra-chr q14.2 q24.2 Oncogene Tumor suppressor gene Seq+ 19087 ChimerSeq STARFusion TCGA_RNA-Seq FAM111B-GLYATL1 FAM111B chr11 58877179 + GLYATL1 chr11 58714519 + Exonic hg19 BRCA TCGA-OL-A66P-01A 9 89 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 19088 ChimerSeq STARFusion TCGA_RNA-Seq FAM111B-GLYATL1 FAM111B chr11 58892191 + GLYATL1 chr11 58714519 + Exonic hg19 BRCA TCGA-OL-A66P-01A 4 89 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 19089 ChimerSeq STARFusion TCGA_RNA-Seq FAM111B-GLYATL1 FAM111B chr11 58877179 + GLYATL1 chr11 58715331 + Exonic hg19 BRCA TCGA-OL-A66P-01A 3 89 In-Frame Intra-chr q12.1 q12.1 Seq+ 19090 ChimerSeq STARFusion TCGA_RNA-Seq CCM2-C7orf10 CCM2 chr7 45039962 + C7orf10 chr7 40899915 + Exonic hg19 BRCA TCGA-OL-A66P-01A 5 21 Out-of-frame Intra-chr p13 Seq+ 19091 ChimerSeq STARFusion TCGA_RNA-Seq ABR-NXN ABR chr17 953290 - NXN chr17 729318 - Exonic hg19 BRCA TCGA-OL-A66P-01A 6 8 In-Frame Intra-chr p13.3 p13.3 19092 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-ST13 MKL1 chr22 40990678 - ST13 chr22 41226960 - Exonic hg19 BRCA TCGA-OL-A66P-01A 2 20 5'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 19093 ChimerSeq STARFusion TCGA_RNA-Seq TRAF2-KIAA1984 TRAF2 chr9 139804446 + KIAA1984 chr9 139693554 + Exonic hg19 BRCA TCGA-OL-A66P-01A 4 3 Out-of-frame Intra-chr q34.3 Tumor suppressor gene 19094 ChimerSeq STARFusion TCGA_RNA-Seq PCBP2-SP1 PCBP2 chr12 53861077 + SP1 chr12 53800369 + Exonic hg19 BRCA TCGA-OL-A66P-01A 2 7 In-Frame Intra-chr q13.13 q13.13 Transcription factor Seq+ 19095 ChimerSeq STARFusion TCGA_RNA-Seq ARPC2-CXCR2 ARPC2 chr2 219090677 + CXCR2 chr2 218994037 + Exonic hg19 BRCA TCGA-OL-A66P-01A 2 6 CDS-5'UTR Intra-chr q35 q35 Tumor suppressor gene 19096 ChimerSeq STARFusion TCGA_RNA-Seq CXCL16-TEKT1 CXCL16 chr17 4641703 - TEKT1 chr17 6722677 - Exonic hg19 BRCA TCGA-OL-A66P-01A 2 5 In-Frame Intra-chr p13.2 p13.1 Seq+ 19097 ChimerSeq STARFusion TCGA_RNA-Seq NAA40-RTN3 NAA40 chr11 63714475 + RTN3 chr11 63517463 + Exonic hg19 BRCA TCGA-OL-A66P-01A 2 4 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 19098 ChimerSeq STARFusion TCGA_RNA-Seq PAK4-SPINT2 PAK4 chr19 39616559 + SPINT2 chr19 38774267 + Exonic hg19 BRCA TCGA-EW-A2FV-01A 52 64 5'UTR-CDS Intra-chr q13.2 STE:STE20 q13.2 Tumor suppressor gene Seq+ 19099 ChimerSeq STARFusion TCGA_RNA-Seq ZNF587B-ZSCAN4 ZNF587B chr19 58350517 + ZSCAN4 chr19 58187409 + Exonic hg19 BRCA TCGA-EW-A2FV-01A 7 39 CDS-5'UTR Intra-chr q13.43 Transcription factor q13.43 Transcription factor Seq+ 19100 ChimerSeq STARFusion TCGA_RNA-Seq STK4-TSHZ2 STK4 chr20 43615937 + TSHZ2 chr20 52103683 + Exonic hg19 BRCA TCGA-EW-A2FV-01A 2 21 CDS-3'UTR Intra-chr q13.12 q13.2 Transcription factor Seq+ 19101 ChimerSeq STARFusion TCGA_RNA-Seq DSCR3-TTC3 DSCR3 chr21 38639539 - TTC3 chr21 38480692 + Exonic hg19 BRCA TCGA-EW-A2FV-01A 3 0 Out-of-frame Intra-chr q22.13 q22.13 Seq+ 19102 ChimerSeq STARFusion TCGA_RNA-Seq PIP4K2B-MED24 PIP4K2B chr17 36933940 - MED24 chr17 38188343 - Exonic hg19 BRCA TCGA-A7-A4SF-01A 24 195 In-Frame Intra-chr q12 q21.1 Seq+ 19103 ChimerSeq STARFusion TCGA_RNA-Seq CNOT2-SLC45A4 CNOT2 chr12 70713144 + SLC45A4 chr8 142231864 - Exonic hg19 BRCA TCGA-A7-A4SF-01A 10 72 In-Frame Inter-chr q15 q24.3 Seq+ 19104 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R13B-CCDC88C PPP1R13B chr14 104219337 - CCDC88C chr14 91745650 - Exonic hg19 BRCA TCGA-A7-A4SF-01A 4 13 Out-of-frame Intra-chr q32.33 q32.12 Seq+ 19105 ChimerSeq STARFusion TCGA_RNA-Seq BCL9-IVL BCL9 chr1 147013444 + IVL chr1 152882255 + Exonic hg19 BRCA TCGA-A7-A4SF-01A 3 8 5'UTR-5'UTR Intra-chr q21.2 Oncogene q21.3 Seq+ 19106 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-RNFT1 BCAS3 chr17 58767122 + RNFT1 chr17 58040645 - Exonic hg19 BRCA TCGA-A7-A4SF-01A 2 4 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 19107 ChimerSeq STARFusion TCGA_RNA-Seq POLR3E-C16orf52 POLR3E chr16 22337116 + C16orf52 chr16 22098614 + Exonic hg19 BRCA TCGA-GM-A2DB-01A 66 42 Out-of-frame Intra-chr Seq+ 19108 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H4-POLR2I ZC3H4 chr19 47597227 - POLR2I chr19 36605314 - Exonic hg19 BRCA TCGA-GM-A2DB-01A 44 109 In-Frame Intra-chr q13.32 q13.12 Seq+ 19109 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H4-POLR2I ZC3H4 chr19 47597227 - POLR2I chr19 36605615 - Exonic hg19 BRCA TCGA-GM-A2DB-01A 11 109 Out-of-frame Intra-chr q13.32 q13.12 Seq+ 19110 ChimerSeq STARFusion TCGA_RNA-Seq NUP98-RHOG NUP98 chr11 3700784 - RHOG chr11 3849436 - Exonic hg19 BRCA TCGA-GM-A2DB-01A 7 21 CDS-5'UTR Intra-chr p15.4 Oncogene Tumor suppressor gene p15.4 Seq+ 19111 ChimerSeq STARFusion TCGA_RNA-Seq PHKG2-RPL27 PHKG2 chr16 30759811 + RPL27 chr17 41150766 + Exonic hg19 BRCA TCGA-GM-A2DB-01A 6 5 5'UTR-5'UTR Inter-chr p11.2 q21.31 Seq+ 19112 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-ILF3 DNM2 chr19 10934575 + ILF3 chr19 10799226 + Exonic hg19 BRCA TCGA-GM-A2DB-01A 2 15 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 19113 ChimerSeq STARFusion TCGA_RNA-Seq CBR4-ERBB4 CBR4 chr4 169923222 - ERBB4 chr2 212989628 - Exonic hg19 BRCA TCGA-E2-A10E-01A 2 3 In-Frame Inter-chr q32.3 q34 Oncogene Tumor suppressor gene Seq+ 19114 ChimerSeq STARFusion TCGA_RNA-Seq PRKRIR-MARK4 PRKRIR chr11 76072000 - MARK4 chr19 45767942 + Exonic hg19 BRCA TCGA-A1-A0SQ-01A 91 282 Out-of-frame Inter-chr q13.32 CAMK:CAMKL Oncogene Seq+ 19115 ChimerSeq STARFusion TCGA_RNA-Seq LRP5-MOGAT2 LRP5 chr11 68193655 + MOGAT2 chr11 75431037 + Exonic hg19 BRCA TCGA-A1-A0SQ-01A 16 136 In-Frame Intra-chr q13.2 q13.5 Seq+ 19116 ChimerSeq STARFusion TCGA_RNA-Seq ZNF154-KIR2DL1 ZNF154 chr19 58216221 - KIR2DL1 chr19 55284785 + Exonic hg19 BRCA TCGA-A1-A0SQ-01A 19 89 In-Frame Intra-chr q13.43 Transcription factor Seq+ 19117 ChimerSeq STARFusion TCGA_RNA-Seq ZNF154-KIR2DL1 ZNF154 chr19 58216221 - KIR2DL1 chr19 55282301 + Exonic hg19 BRCA TCGA-A1-A0SQ-01A 10 68 In-Frame Intra-chr q13.43 Transcription factor Seq+ 19118 ChimerSeq STARFusion TCGA_RNA-Seq ZNF154-KIR2DL3 ZNF154 chr19 58216221 - KIR2DL3 chr19 55253426 + Exonic hg19 BRCA TCGA-A1-A0SQ-01A 19 24 In-Frame Intra-chr q13.43 Transcription factor 19119 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-POLD3 PPP6R3 chr11 68228295 + POLD3 chr11 74305106 + Exonic hg19 BRCA TCGA-A1-A0SQ-01A 6 71 5'UTR-5'UTR Intra-chr q13.2 q13.4 Seq+ 19120 ChimerSeq STARFusion TCGA_RNA-Seq ZNF154-KIR2DL1 ZNF154 chr19 58220307 - KIR2DL1 chr19 55282301 + Exonic hg19 BRCA TCGA-A1-A0SQ-01A 2 86 Out-of-frame Intra-chr q13.43 Transcription factor Seq+ 19121 ChimerSeq STARFusion TCGA_RNA-Seq ZNF154-KIR2DL1 ZNF154 chr19 58220307 - KIR2DL1 chr19 55284785 + Exonic hg19 BRCA TCGA-A1-A0SQ-01A 3 68 Out-of-frame Intra-chr q13.43 Transcription factor Seq+ 19122 ChimerSeq STARFusion TCGA_RNA-Seq SPINT2-PAK1 SPINT2 chr19 38755638 + PAK1 chr11 77085410 - Exonic hg19 BRCA TCGA-A1-A0SQ-01A 11 33 In-Frame Inter-chr q13.2 Tumor suppressor gene q14.1 STE:STE20 Seq+ 19123 ChimerSeq STARFusion TCGA_RNA-Seq ZNF180-TOMM40 ZNF180 chr19 45001336 - TOMM40 chr19 45406287 + Exonic hg19 BRCA TCGA-A1-A0SQ-01A 13 24 Out-of-frame Intra-chr q13.31 Transcription factor q13.32 Seq+ 19124 ChimerSeq STARFusion TCGA_RNA-Seq ZNF154-KIR2DL3 ZNF154 chr19 58216221 - KIR2DL3 chr19 55250953 + Exonic hg19 BRCA TCGA-A1-A0SQ-01A 10 24 In-Frame Intra-chr q13.43 Transcription factor 19125 ChimerSeq STARFusion TCGA_RNA-Seq MARK4-LYPD5 MARK4 chr19 45797710 + LYPD5 chr19 44303986 - Exonic hg19 BRCA TCGA-A1-A0SQ-01A 7 35 Out-of-frame Intra-chr q13.32 CAMK:CAMKL Oncogene q13.31 Seq+ 19126 ChimerSeq STARFusion TCGA_RNA-Seq INTS4-PLAUR INTS4 chr11 77612467 - PLAUR chr19 44160792 - Exonic hg19 BRCA TCGA-A1-A0SQ-01A 4 22 Out-of-frame Inter-chr q14.1 q13.31 Seq+ 19127 ChimerSeq STARFusion TCGA_RNA-Seq ZNF814-IRF3 ZNF814 chr19 58388284 - IRF3 chr19 50163090 - Exonic hg19 BRCA TCGA-A1-A0SQ-01A 4 22 In-Frame Intra-chr q13.43 Transcription factor q13.33 Tumor suppressor gene Transcription factor Seq+ 19128 ChimerSeq STARFusion TCGA_RNA-Seq CCDC106-CD37 CCDC106 chr19 56160950 + CD37 chr19 49838971 + Exonic hg19 BRCA TCGA-A1-A0SQ-01A 2 27 Out-of-frame Intra-chr q13.42 q13.33 Seq+ 19129 ChimerSeq STARFusion TCGA_RNA-Seq ZNF154-KIR2DL3 ZNF154 chr19 58220307 - KIR2DL3 chr19 55253426 + Exonic hg19 BRCA TCGA-A1-A0SQ-01A 3 23 Out-of-frame Intra-chr q13.43 Transcription factor 19130 ChimerSeq STARFusion TCGA_RNA-Seq ZNF154-KIR2DL3 ZNF154 chr19 58220307 - KIR2DL3 chr19 55250953 + Exonic hg19 BRCA TCGA-A1-A0SQ-01A 2 22 Out-of-frame Intra-chr q13.43 Transcription factor 19131 ChimerSeq STARFusion TCGA_RNA-Seq ZNF814-IRF3 ZNF814 chr19 58400135 - IRF3 chr19 50163090 - Exonic hg19 BRCA TCGA-A1-A0SQ-01A 2 22 In-Frame Intra-chr q13.43 Transcription factor q13.33 Tumor suppressor gene Transcription factor Seq+ 19132 ChimerSeq STARFusion TCGA_RNA-Seq PLAUR-AAMDC PLAUR chr19 44174218 - AAMDC chr11 77629107 + Exonic hg19 BRCA TCGA-A1-A0SQ-01A 2 20 Out-of-frame Inter-chr q13.31 q14.1 Seq+ 19133 ChimerSeq STARFusion TCGA_RNA-Seq TENM4-NARS2 TENM4 chr11 78673188 - NARS2 chr11 78239982 - Exonic hg19 BRCA TCGA-A1-A0SQ-01A 5 8 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 19134 ChimerSeq STARFusion TCGA_RNA-Seq ARFGAP1-SPAG4 ARFGAP1 chr20 61904272 + SPAG4 chr20 34207117 + Exonic hg19 BRCA TCGA-A1-A0SQ-01A 2 18 5'UTR-CDS Intra-chr q13.33 q11.22 Seq+ 19135 ChimerSeq STARFusion TCGA_RNA-Seq MRPL21-SSH3 MRPL21 chr11 68663983 - SSH3 chr11 67074309 + Exonic hg19 BRCA TCGA-E2-A15O-01A 33 131 In-Frame Intra-chr q13.3 q13.2 Seq+ 19136 ChimerSeq STARFusion TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5410006 - RNF216 chr7 5692141 - Exonic hg19 BRCA TCGA-A2-A0YT-01A 16 47 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 19137 ChimerSeq STARFusion TCGA_RNA-Seq LARGE-SNW1 LARGE chr22 33960834 - SNW1 chr14 78189620 - Exonic hg19 BRCA TCGA-A2-A0YT-01A 6 53 In-Frame Inter-chr q24.3 Seq+ 19138 ChimerSeq STARFusion TCGA_RNA-Seq NPC2-RAD51B NPC2 chr14 74959896 - RAD51B chr14 68878141 + Exonic hg19 BRCA TCGA-A2-A0YT-01A 7 38 In-Frame Intra-chr q24.3 q24.1 Seq+ 19139 ChimerSeq STARFusion TCGA_RNA-Seq RAD51B-TMPRSS4 RAD51B chr14 68878244 + TMPRSS4 chr11 117982456 + Exonic hg19 BRCA TCGA-A2-A0YT-01A 7 12 Out-of-frame Inter-chr q24.1 q23.3 Seq+ 19140 ChimerSeq STARFusion TCGA_RNA-Seq JUP-RFX5 JUP chr17 39923781 - RFX5 chr1 151315256 - Exonic hg19 BRCA TCGA-A2-A0YT-01A 3 1 Out-of-frame Inter-chr q21.2 Tumor suppressor gene q21.3 Transcription factor Seq+ 19141 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC11-MLF1IP TRAPPC11 chr4 184580600 + MLF1IP chr4 185634167 - Exonic hg19 BRCA TCGA-A2-A0YT-01A 2 1 5'UTR-CDS Intra-chr q35.1 19142 ChimerSeq STARFusion TCGA_RNA-Seq MFN2-SLC3A2 MFN2 chr1 12040541 + SLC3A2 chr11 62650380 + Exonic hg19 BRCA TCGA-A2-A0YT-01A 2 0 5'UTR-5'UTR Inter-chr p36.22 q12.3 19143 ChimerSeq STARFusion TCGA_RNA-Seq RPL39L-TIPARP RPL39L chr3 186857001 - TIPARP chr3 156411809 + Exonic hg19 BRCA TCGA-A2-A0YT-01A 2 0 5'UTR-CDS Intra-chr q27.3 q25.31 19144 ChimerSeq STARFusion TCGA_RNA-Seq SAMD12-ZHX2 SAMD12 chr8 119634043 - ZHX2 chr8 123875716 + Exonic hg19 BRCA TCGA-A2-A0YT-01A 2 0 CDS-5'UTR Intra-chr q24.12 q24.13 Tumor suppressor gene Transcription factor 19145 ChimerSeq STARFusion TCGA_RNA-Seq TRIM11-SLC2A5 TRIM11 chr1 228588665 - SLC2A5 chr1 9098565 - Exonic hg19 BRCA TCGA-A8-A09E-01A 6 44 In-Frame Intra-chr q42.13 p36.23 Seq+ 19146 ChimerSeq STARFusion TCGA_RNA-Seq TRIM11-SLC2A5 TRIM11 chr1 228588665 - SLC2A5 chr1 9098988 - Exonic hg19 BRCA TCGA-A8-A09E-01A 4 44 In-Frame Intra-chr q42.13 p36.23 Seq+ 19147 ChimerSeq STARFusion TCGA_RNA-Seq STC2-AP1G1 STC2 chr5 172750222 - AP1G1 chr16 71773244 - Exonic hg19 BRCA TCGA-A8-A09E-01A 3 27 Out-of-frame Inter-chr q35.2 q22.2 Seq+ 19148 ChimerSeq STARFusion TCGA_RNA-Seq AHNAK-RPS6KA4 AHNAK chr11 62259204 - RPS6KA4 chr11 64132773 + Exonic hg19 BRCA TCGA-A8-A09E-01A 5 18 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q13.1 Seq+ 19149 ChimerSeq STARFusion TCGA_RNA-Seq TMEM14C-PAK1IP1 TMEM14C chr6 10725270 + PAK1IP1 chr6 10709186 + Exonic hg19 BRCA TCGA-EW-A3U0-01A 15 123 Out-of-frame Intra-chr p24.2 p24.2 Seq+ 19150 ChimerSeq STARFusion TCGA_RNA-Seq RFX3-GLDC RFX3 chr9 3525747 - GLDC chr9 6565429 - Exonic hg19 BRCA TCGA-EW-A3U0-01A 25 82 5'UTR-CDS Intra-chr p24.2 Transcription factor p24.1 Seq+ 19151 ChimerSeq STARFusion TCGA_RNA-Seq RRM1-STIM1 RRM1 chr11 4116261 + STIM1 chr11 4107707 + Exonic hg19 BRCA TCGA-EW-A3U0-01A 11 63 3'UTR-CDS Intra-chr p15.4 Oncogene p15.4 Seq+ 19152 ChimerSeq STARFusion TCGA_RNA-Seq MAEA-TMEM71 MAEA chr4 1309388 + TMEM71 chr8 133697351 - Exonic hg19 BRCA TCGA-EW-A3U0-01A 13 43 CDS-3'UTR Inter-chr p16.3 q24.22 Seq+ 19153 ChimerSeq STARFusion TCGA_RNA-Seq SLC44A1-RAD23B SLC44A1 chr9 108123611 + RAD23B chr9 110068660 + Exonic hg19 BRCA TCGA-EW-A3U0-01A 13 37 In-Frame Intra-chr q31.1 q31.2 Tumor suppressor gene Seq+ 19154 ChimerSeq STARFusion TCGA_RNA-Seq INADL-ST6GALNAC5 INADL chr1 62208227 + ST6GALNAC5 chr1 77528660 + Exonic hg19 BRCA TCGA-EW-A3U0-01A 5 49 5'UTR-CDS Intra-chr p31.1 Seq+ 19155 ChimerSeq STARFusion TCGA_RNA-Seq PTPLAD1-ANKDD1A PTPLAD1 chr15 65823056 + ANKDD1A chr15 65223020 + Exonic hg19 BRCA TCGA-EW-A3U0-01A 4 44 In-Frame Intra-chr q22.31 Seq+ 19156 ChimerSeq STARFusion TCGA_RNA-Seq SESTD1-ZNF385B SESTD1 chr2 180129226 - ZNF385B chr2 180635399 - Exonic hg19 BRCA TCGA-EW-A3U0-01A 10 17 5'UTR-5'UTR Intra-chr q31.2 q31.3 Transcription factor Seq+ 19157 ChimerSeq STARFusion TCGA_RNA-Seq GALNT14-SF3B14 GALNT14 chr2 31133814 - SF3B14 chr2 24291329 - Exonic hg19 BRCA TCGA-EW-A3U0-01A 8 18 Out-of-frame Intra-chr p23.1 19158 ChimerSeq STARFusion TCGA_RNA-Seq ABLIM1-IGH@ ABLIM1 chr10 116245056 - IGH@ chr14 106237742 - Exonic hg19 BRCA TCGA-EW-A3U0-01A 12 1 Out-of-frame Inter-chr q25.3 32.33 19159 ChimerSeq STARFusion TCGA_RNA-Seq ABLIM1-IGHG1 ABLIM1 chr10 116245056 - IGHG1 chr14 106237742 - Exonic hg19 BRCA TCGA-EW-A3U0-01A 12 1 Out-of-frame Inter-chr q25.3 q32.33 19160 ChimerSeq STARFusion TCGA_RNA-Seq ABLIM1-IGH@ ABLIM1 chr10 116245056 - IGH@ chr14 106209407 - Exonic hg19 BRCA TCGA-EW-A3U0-01A 11 1 Out-of-frame Inter-chr q25.3 32.33 19161 ChimerSeq STARFusion TCGA_RNA-Seq ABLIM1-IGHG1 ABLIM1 chr10 116245056 - IGHG1 chr14 106209407 - Exonic hg19 BRCA TCGA-EW-A3U0-01A 11 1 Out-of-frame Inter-chr q25.3 q32.33 19162 ChimerSeq STARFusion TCGA_RNA-Seq TRA2A-HECW1 TRA2A chr7 23561326 - HECW1 chr7 43283474 + Exonic hg19 BRCA TCGA-EW-A3U0-01A 4 24 CDS-5'UTR Intra-chr p15.3 p14.1 Seq+ 19163 ChimerSeq STARFusion TCGA_RNA-Seq TRA2A-HECW1 TRA2A chr7 23561326 - HECW1 chr7 43351362 + Exonic hg19 BRCA TCGA-EW-A3U0-01A 4 23 Out-of-frame Intra-chr p15.3 p14.1 Seq+ 19164 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-C19orf57 PVT1 chr8 128903244 + C19orf57 chr19 14004036 - Exonic hg19 BRCA TCGA-EW-A3U0-01A 4 19 5'UTR-CDS Inter-chr q24.21 p13.12 Seq+ 19165 ChimerSeq STARFusion TCGA_RNA-Seq ABLIM1-IGH@ ABLIM1 chr10 116245056 - IGH@ chr14 106136181 - Exonic hg19 BRCA TCGA-EW-A3U0-01A 8 1 Out-of-frame Inter-chr q25.3 32.33 19166 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-C19orf57 PVT1 chr8 128903244 + C19orf57 chr19 14003703 - Exonic hg19 BRCA TCGA-EW-A3U0-01A 2 19 5'UTR-CDS Inter-chr q24.21 p13.12 Seq+ 19167 ChimerSeq STARFusion TCGA_RNA-Seq GOLGB1-CCDC58 GOLGB1 chr3 121409517 - CCDC58 chr3 122090647 - Exonic hg19 BRCA TCGA-EW-A3U0-01A 4 9 In-Frame Intra-chr q13.33 q21.1 Seq+ 19168 ChimerSeq STARFusion TCGA_RNA-Seq PRDM11-ACCS PRDM11 chr11 45204674 + ACCS chr11 44089178 + Exonic hg19 BRCA TCGA-EW-A3U0-01A 2 14 5'UTR-5'UTR Intra-chr p11.2 Tumor suppressor gene p11.2 Seq+ 19169 ChimerSeq STARFusion TCGA_RNA-Seq TSTD1-ARHGAP30 TSTD1 chr1 161008670 - ARHGAP30 chr1 161022587 - Exonic hg19 BRCA TCGA-EW-A3U0-01A 3 10 In-Frame Intra-chr q23.3 q23.3 Seq+ 19170 ChimerSeq STARFusion TCGA_RNA-Seq F11R-ARHGAP30 F11R chr1 161008670 - ARHGAP30 chr1 161022587 - Exonic hg19 BRCA TCGA-EW-A3U0-01A 3 9 5'UTR-CDS Intra-chr q23.3 q23.3 19171 ChimerSeq STARFusion TCGA_RNA-Seq RNGTT-MDN1 RNGTT chr6 89554076 - MDN1 chr6 90374347 - Exonic hg19 BRCA TCGA-EW-A3U0-01A 2 8 In-Frame Intra-chr q15 q15 Seq+ 19172 ChimerSeq STARFusion TCGA_RNA-Seq C12orf23-RFX4 C12orf23 chr12 107360958 + RFX4 chr12 107033110 + Exonic hg19 BRCA TCGA-EW-A3U0-01A 2 6 In-Frame Intra-chr q23.3 Transcription factor Seq+ 19173 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-PHB TANC2 chr17 61086987 + PHB chr17 47490653 - Exonic hg19 BRCA TCGA-D8-A27N-01A 37 220 CDS-5'UTR Intra-chr q23.2 q21.33 Tumor suppressor gene Seq+ 19174 ChimerSeq STARFusion TCGA_RNA-Seq USP22-SLC39A11 USP22 chr17 20945978 - SLC39A11 chr17 70732858 - Exonic hg19 BRCA TCGA-D8-A27N-01A 49 103 Out-of-frame Intra-chr p11.2 q25.1 Seq+ 19175 ChimerSeq STARFusion TCGA_RNA-Seq PRKCI-TNIK PRKCI chr3 169953139 + TNIK chr3 170912424 - Exonic hg19 BRCA TCGA-D8-A27N-01A 13 33 Out-of-frame Intra-chr q26.2 q26.31 STE:STE20 Seq+ 19176 ChimerSeq STARFusion TCGA_RNA-Seq MSI2-TEX2 MSI2 chr17 55478832 + TEX2 chr17 62272455 - Exonic hg19 BRCA TCGA-D8-A27N-01A 6 60 In-Frame Intra-chr q22 q23.3 Seq+ 19177 ChimerSeq STARFusion TCGA_RNA-Seq MSI2-TEX2 MSI2 chr17 55607085 + TEX2 chr17 62272455 - Exonic hg19 BRCA TCGA-D8-A27N-01A 6 60 Out-of-frame Intra-chr q22 q23.3 Seq+ 19178 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-CCDC170 ESR1 chr6 152201906 + CCDC170 chr6 151857453 + Exonic hg19 BRCA TCGA-D8-A27N-01A 10 32 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 KB Pub Seq+ 19179 ChimerSeq STARFusion TCGA_RNA-Seq TNKS-ASAH1 TNKS chr8 9473187 + ASAH1 chr8 17922040 - Exonic hg19 BRCA TCGA-D8-A27N-01A 4 52 In-Frame Intra-chr p23.1 p22 Seq+ 19180 ChimerSeq STARFusion TCGA_RNA-Seq TNKS-ASAH1 TNKS chr8 9473187 + ASAH1 chr8 17920739 - Exonic hg19 BRCA TCGA-D8-A27N-01A 4 52 In-Frame Intra-chr p23.1 p22 Seq+ 19181 ChimerSeq STARFusion TCGA_RNA-Seq CYTH1-MRC2 CYTH1 chr17 76778284 - MRC2 chr17 60741909 + Exonic hg19 BRCA TCGA-D8-A27N-01A 7 26 In-Frame Intra-chr q25.3 q23.2 Seq+ 19182 ChimerSeq STARFusion TCGA_RNA-Seq BPTF-ABCC3 BPTF chr17 65850878 + ABCC3 chr17 48733193 + Exonic hg19 BRCA TCGA-D8-A27N-01A 7 9 Out-of-frame Intra-chr q24.2 Transcription factor q21.33 Seq+ 19183 ChimerSeq STARFusion TCGA_RNA-Seq FOXK2-ABCA5 FOXK2 chr17 80542064 + ABCA5 chr17 67273983 - Exonic hg19 BRCA TCGA-D8-A27N-01A 3 19 In-Frame Intra-chr q25.3 Transcription factor q24.3 Seq+ 19184 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6C-APPBP2 TNRC6C chr17 76089205 + APPBP2 chr17 58577848 - Exonic hg19 BRCA TCGA-D8-A27N-01A 6 5 Out-of-frame Intra-chr q25.3 q23.2 Seq+ 19185 ChimerSeq STARFusion TCGA_RNA-Seq FOXK2-ABCA5 FOXK2 chr17 80542064 + ABCA5 chr17 67270269 - Exonic hg19 BRCA TCGA-D8-A27N-01A 2 19 Out-of-frame Intra-chr q25.3 Transcription factor q24.3 Seq+ 19186 ChimerSeq STARFusion TCGA_RNA-Seq NAALADL2-FBXO45 NAALADL2 chr3 175189546 + FBXO45 chr3 196304324 + Exonic hg19 BRCA TCGA-D8-A27N-01A 3 10 In-Frame Intra-chr q26.31 q29 Seq+ 19187 ChimerSeq STARFusion TCGA_RNA-Seq COL1A2-MBNL1 COL1A2 chr7 94027071 + MBNL1 chr3 151987554 + Exonic hg19 BRCA TCGA-D8-A1JE-01A 9 2 Out-of-frame Inter-chr q21.3 q25.1 19188 ChimerSeq STARFusion TCGA_RNA-Seq PPFIBP1-HP1BP3 PPFIBP1 chr12 27825416 + HP1BP3 chr1 21100103 - Exonic hg19 BRCA TCGA-E2-A15L-01A 2 0 In-Frame Inter-chr p11.23 p36.12 19189 ChimerSeq STARFusion TCGA_RNA-Seq LAPTM4A-SDC1 LAPTM4A chr2 20251171 - SDC1 chr2 20405185 - Exonic hg19 BRCA TCGA-AC-A6IW-01A 67 203 In-Frame Intra-chr p24.1 p24.1 Seq+ 19190 ChimerSeq STARFusion TCGA_RNA-Seq DDAH1-ZNHIT6 DDAH1 chr1 85930426 - ZNHIT6 chr1 86119781 - Exonic hg19 BRCA TCGA-AC-A6IW-01A 13 31 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 19191 ChimerSeq STARFusion TCGA_RNA-Seq PAPOLA-VRK1 PAPOLA chr14 96994343 + VRK1 chr14 97299804 + Exonic hg19 BRCA TCGA-AC-A6IW-01A 13 23 CDS-5'UTR Intra-chr q32.2 q32.2 CK1:VRK 19192 ChimerSeq STARFusion TCGA_RNA-Seq RAP1GAP-NIT2 RAP1GAP chr1 21936068 - NIT2 chr3 100073616 + Exonic hg19 BRCA TCGA-AC-A6IW-01A 7 28 Out-of-frame Inter-chr p36.12 Tumor suppressor gene q12.2 Tumor suppressor gene Seq+ 19193 ChimerSeq STARFusion TCGA_RNA-Seq LRP8-TMEM217 LRP8 chr1 53716362 - TMEM217 chr6 37186817 - Exonic hg19 BRCA TCGA-AC-A6IW-01A 10 10 CDS-5'UTR Inter-chr p32.3 p21.2 Seq+ 19194 ChimerSeq STARFusion TCGA_RNA-Seq RAP1GAP-NIT2 RAP1GAP chr1 21937945 - NIT2 chr3 100073616 + Exonic hg19 BRCA TCGA-AC-A6IW-01A 2 28 Out-of-frame Inter-chr p36.12 Tumor suppressor gene q12.2 Tumor suppressor gene Seq+ 19195 ChimerSeq STARFusion TCGA_RNA-Seq RAP1GAP-NIT2 RAP1GAP chr1 21936613 - NIT2 chr3 100073616 + Exonic hg19 BRCA TCGA-AC-A6IW-01A 2 28 Out-of-frame Inter-chr p36.12 Tumor suppressor gene q12.2 Tumor suppressor gene Seq+ 19196 ChimerSeq STARFusion TCGA_RNA-Seq RAB2A-TRAPPC9 RAB2A chr8 61429812 + TRAPPC9 chr8 141034176 - Exonic hg19 BRCA TCGA-AC-A6IW-01A 3 22 Out-of-frame Intra-chr q12.1 q24.3 Seq+ 19197 ChimerSeq STARFusion TCGA_RNA-Seq PPP1CB-WDR43 PPP1CB chr2 28975042 + WDR43 chr2 29135456 + Exonic hg19 BRCA TCGA-AC-A6IW-01A 4 16 Out-of-frame Intra-chr p23.2 p23.2 19198 ChimerSeq STARFusion TCGA_RNA-Seq UBE3C-DNAJB6 UBE3C chr7 156932032 + DNAJB6 chr7 157174940 + Exonic hg19 BRCA TCGA-AC-A6IW-01A 5 11 Out-of-frame Intra-chr q36.3 q36.3 Seq+ 19199 ChimerSeq STARFusion TCGA_RNA-Seq MIR1204-PVT1 MIR1204 chr8 128808254 + PVT1 chr8 129001408 + Exonic hg19 BRCA TCGA-AC-A6IW-01A 5 10 5'UTR-5'UTR Intra-chr q24.21 q24.21 19200 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-PCMTD1 AGO2 chr8 141595218 - PCMTD1 chr8 52746249 - Exonic hg19 BRCA TCGA-AC-A6IW-01A 5 8 Out-of-frame Intra-chr q24.3 q11.23 Seq+ 19201 ChimerSeq STARFusion TCGA_RNA-Seq RAB2A-CHD7 RAB2A chr8 61484672 + CHD7 chr8 61693559 + Exonic hg19 BRCA TCGA-AC-A6IW-01A 4 12 In-Frame Intra-chr q12.1 q12.2 19202 ChimerSeq STARFusion TCGA_RNA-Seq SIAH2-KIAA1430 SIAH2 chr3 150480220 - KIAA1430 chr4 186085333 - Exonic hg19 BRCA TCGA-AC-A6IW-01A 5 7 In-Frame Inter-chr q25.1 Seq+ 19203 ChimerSeq STARFusion TCGA_RNA-Seq MIR1204-PVT1 MIR1204 chr8 128808254 + PVT1 chr8 128951754 + Exonic hg19 BRCA TCGA-AC-A6IW-01A 4 10 5'UTR-5'UTR Intra-chr q24.21 q24.21 19204 ChimerSeq STARFusion TCGA_RNA-Seq GALNT10-IQCA1 GALNT10 chr5 153677639 + IQCA1 chr2 237289279 - Exonic hg19 BRCA TCGA-AC-A6IW-01A 2 14 Out-of-frame Inter-chr q33.2 q37.3 Seq+ 19205 ChimerSeq STARFusion TCGA_RNA-Seq DAD1-RAB2B DAD1 chr14 23057853 - RAB2B chr14 21936911 - Exonic hg19 BRCA TCGA-AC-A6IW-01A 4 5 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 19206 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3B-UCK2 FNDC3B chr3 171757561 + UCK2 chr1 165859441 + Exonic hg19 BRCA TCGA-AC-A6IW-01A 2 13 5'UTR-CDS Inter-chr q26.31 q24.1 Seq+ 19207 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3B-UCK2 FNDC3B chr3 171758414 + UCK2 chr1 165859441 + Exonic hg19 BRCA TCGA-AC-A6IW-01A 2 13 5'UTR-CDS Inter-chr q26.31 q24.1 Seq+ 19208 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H15-FAM171B ZC3H15 chr2 187351184 + FAM171B chr2 187604955 + Exonic hg19 BRCA TCGA-AC-A6IW-01A 2 8 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 19209 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-NADK GNB1 chr1 1822259 - NADK chr1 1688749 - Exonic hg19 BRCA TCGA-AC-A6IW-01A 2 6 5'UTR-CDS Intra-chr p36.33 p36.33 Seq+ 19210 ChimerSeq STARFusion TCGA_RNA-Seq PHACTR4-YTHDF2 PHACTR4 chr1 28733974 + YTHDF2 chr1 29095441 + Exonic hg19 BRCA TCGA-AC-A6IW-01A 3 1 Out-of-frame Intra-chr p35.3 Tumor suppressor gene p35.3 19211 ChimerSeq STARFusion TCGA_RNA-Seq UCK2-USP10 UCK2 chr1 165797169 + USP10 chr16 84767041 + Exonic hg19 BRCA TCGA-AC-A6IW-01A 2 5 In-Frame Inter-chr q24.1 q24.1 19212 ChimerSeq STARFusion TCGA_RNA-Seq ARID4B-TOMM20 ARID4B chr1 235490229 - TOMM20 chr1 235285687 - Exonic hg19 BRCA TCGA-AC-A6IW-01A 2 4 Out-of-frame Intra-chr q42.3 q42.3 Seq+ 19213 ChimerSeq STARFusion TCGA_RNA-Seq BRWD1-ABCA10 BRWD1 chr21 40619627 - ABCA10 chr17 67184020 - Exonic hg19 BRCA TCGA-AC-A6IW-01A 2 3 Out-of-frame Inter-chr q22.2 q24.3 Seq+ 19214 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57697534 + VMP1 chr17 57808782 + Exonic hg19 BRCA TCGA-AC-A6IW-01A 2 2 CDS-5'UTR Intra-chr q23.1 q23.1 KB Pub Seq+ 19215 ChimerSeq STARFusion TCGA_RNA-Seq DEPDC1B-ELOVL7 DEPDC1B chr5 59940572 - ELOVL7 chr5 60067920 - Exonic hg19 BRCA TCGA-AC-A6IW-01A 2 2 In-Frame Intra-chr q12.1 q12.1 Seq+ 19216 ChimerSeq STARFusion TCGA_RNA-Seq UHRF1BP1L-ANKS1B UHRF1BP1L chr12 100536370 - ANKS1B chr12 99640642 - Exonic hg19 BRCA TCGA-AC-A6IW-01A 2 2 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 19217 ChimerSeq STARFusion TCGA_RNA-Seq NCOA2-ARFGEF1 NCOA2 chr8 71315935 - ARFGEF1 chr8 68214701 - Exonic hg19 BRCA TCGA-A8-A08T-01A 7 33 5'UTR-CDS Intra-chr q13.3 Oncogene Transcription factor q13.2 Seq+ 19218 ChimerSeq STARFusion TCGA_RNA-Seq MTDH-SPIDR MTDH chr8 98731417 + SPIDR chr8 48586363 + Exonic hg19 BRCA TCGA-A8-A08T-01A 2 10 Out-of-frame Intra-chr q22.1 q11.21 Seq+ 19219 ChimerSeq STARFusion TCGA_RNA-Seq TADA2A-MED24 TADA2A chr17 35818689 + MED24 chr17 38192407 - Exonic hg19 BRCA TCGA-AR-A0TQ-01A 39 148 Out-of-frame Intra-chr q12 q21.1 Seq+ 19220 ChimerSeq STARFusion TCGA_RNA-Seq TBCD-LOC100507412 TBCD chr17 80772810 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-AR-A0TQ-01A 40 111 CDS-5'UTR Inter-chr 19221 ChimerSeq STARFusion TCGA_RNA-Seq TADA2A-MED24 TADA2A chr17 35804870 + MED24 chr17 38192407 - Exonic hg19 BRCA TCGA-AR-A0TQ-01A 17 148 Out-of-frame Intra-chr q12 q21.1 Seq+ 19222 ChimerSeq STARFusion TCGA_RNA-Seq TADA2A-MED24 TADA2A chr17 35802753 + MED24 chr17 38192407 - Exonic hg19 BRCA TCGA-AR-A0TQ-01A 16 148 In-Frame Intra-chr q12 q21.1 Seq+ 19223 ChimerSeq STARFusion TCGA_RNA-Seq TBCD-LOC100507412 TBCD chr17 80767658 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-AR-A0TQ-01A 6 111 CDS-5'UTR Inter-chr 19224 ChimerSeq STARFusion TCGA_RNA-Seq SPAG9-TADA2A SPAG9 chr17 49133773 - TADA2A chr17 35771356 + Exonic hg19 BRCA TCGA-AR-A0TQ-01A 12 46 CDS-5'UTR Intra-chr q21.33 q12 Seq+ 19225 ChimerSeq STARFusion TCGA_RNA-Seq TNFRSF6B-IKZF3 TNFRSF6B chr20 62328523 + IKZF3 chr17 37916306 - Exonic hg19 BRCA TCGA-AR-A0TQ-01A 12 28 Out-of-frame Inter-chr q13.33 q21.1 Tumor suppressor gene Transcription factor Seq+ 19226 ChimerSeq STARFusion TCGA_RNA-Seq BRIP1-SPAG9 BRIP1 chr17 59934419 - SPAG9 chr17 49157065 - Exonic hg19 BRCA TCGA-AR-A0TQ-01A 9 26 Out-of-frame Intra-chr q23.2 Oncogene q21.33 Seq+ 19227 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-CYTH1 BCAS3 chr17 59001861 + CYTH1 chr17 76705814 - Exonic hg19 BRCA TCGA-AR-A0TQ-01A 7 11 In-Frame Intra-chr q23.2 q25.3 Seq+ 19228 ChimerSeq STARFusion TCGA_RNA-Seq SPAG9-BRIP1 SPAG9 chr17 49133773 - BRIP1 chr17 59924581 - Exonic hg19 BRCA TCGA-AR-A0TQ-01A 4 13 In-Frame Intra-chr q21.33 q23.2 Oncogene Seq+ 19229 ChimerSeq STARFusion TCGA_RNA-Seq SPAG9-BRIP1 SPAG9 chr17 49133773 - BRIP1 chr17 59926617 - Exonic hg19 BRCA TCGA-AR-A0TQ-01A 3 13 Out-of-frame Intra-chr q21.33 q23.2 Oncogene Seq+ 19230 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-BRIP1 GRB7 chr17 37902041 + BRIP1 chr17 59934592 - Exonic hg19 BRCA TCGA-AR-A0TQ-01A 3 10 In-Frame Intra-chr q12 q23.2 Oncogene Seq+ 19231 ChimerSeq STARFusion TCGA_RNA-Seq F2R-KRT8 F2R chr5 76028970 + KRT8 chr12 53293809 - Exonic hg19 BRCA TCGA-AR-A0TQ-01A 3 1 Out-of-frame Inter-chr q13.3 q13.13 19232 ChimerSeq STARFusion TCGA_RNA-Seq RFX3-SLC24A2 RFX3 chr9 3330259 - SLC24A2 chr9 19622297 - Exonic hg19 BRCA TCGA-AR-A0TQ-01A 2 2 In-Frame Intra-chr p24.2 Transcription factor p22.1 Seq+ 19233 ChimerSeq STARFusion TCGA_RNA-Seq USP1-SGIP1 USP1 chr1 62914337 + SGIP1 chr1 67091530 + Exonic hg19 BRCA TCGA-AR-A24S-01A 23 35 Out-of-frame Intra-chr p31.3 p31.3 Seq+ 19234 ChimerSeq STARFusion TCGA_RNA-Seq IPO7-OR7E14P IPO7 chr11 9406394 + OR7E14P chr11 17073579 + Exonic hg19 BRCA TCGA-AR-A24S-01A 7 6 CDS-5'UTR Intra-chr p15.4 p15.1 Seq+ 19235 ChimerSeq STARFusion TCGA_RNA-Seq SMARCA4-RASAL3 SMARCA4 chr19 11123788 + RASAL3 chr19 15572107 - Exonic hg19 BRCA TCGA-AR-A24S-01A 3 6 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.12 Seq+ 19236 ChimerSeq STARFusion TCGA_RNA-Seq ZNF431-WIZ ZNF431 chr19 21326446 + WIZ chr19 15538344 - Exonic hg19 BRCA TCGA-AR-A24S-01A 2 4 Out-of-frame Intra-chr p12 Transcription factor p13.12 Transcription factor Seq+ 19237 ChimerSeq STARFusion TCGA_RNA-Seq RASSF8-SSPN RASSF8 chr12 26208379 + SSPN chr12 26377226 + Exonic hg19 BRCA TCGA-AR-A24S-01A 2 2 Out-of-frame Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 19238 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-RHOD PPFIA1 chr11 70118542 + RHOD chr11 66833367 + Exonic hg19 BRCA TCGA-EW-A1J3-01A 226 563 In-Frame Intra-chr q13.3 q13.2 Seq+ 19239 ChimerSeq STARFusion TCGA_RNA-Seq MED24-TNS4 MED24 chr17 38207763 - TNS4 chr17 38633652 - Exonic hg19 BRCA TCGA-EW-A1J3-01A 96 376 Out-of-frame Intra-chr q21.1 q21.2 Seq+ 19240 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PSMD3 RARA chr17 38487648 + PSMD3 chr17 38151207 + Exonic hg19 BRCA TCGA-EW-A1J3-01A 43 192 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q21.1 Seq+ 19241 ChimerSeq STARFusion TCGA_RNA-Seq LINC00993-TACC1P1 LINC00993 chr10 37635757 + TACC1P1 chr10 37811939 + Exonic hg19 BRCA TCGA-EW-A1J3-01A 4 10 Out-of-frame Intra-chr p11.21 p11.21 19242 ChimerSeq STARFusion TCGA_RNA-Seq ADAM9-PROSC ADAM9 chr8 38865502 + PROSC chr8 37623044 + Exonic hg19 BRCA TCGA-WT-AB41-01A 6 17 In-Frame Intra-chr Seq+ 19243 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHF2-NDUFAF6 PLEKHF2 chr8 96146258 + NDUFAF6 chr8 96053798 + Exonic hg19 BRCA TCGA-BH-A0C0-01A 32 115 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 19244 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT2-CDC42SE1 AGPAT2 chr9 139571413 - CDC42SE1 chr1 151027602 - Exonic hg19 BRCA TCGA-BH-A0C0-01A 27 51 In-Frame Inter-chr q34.3 q21.3 Seq+ 19245 ChimerSeq STARFusion TCGA_RNA-Seq RGS3-SLC31A1 RGS3 chr9 116267803 + SLC31A1 chr9 116018394 + Exonic hg19 BRCA TCGA-BH-A0C0-01A 28 40 CDS-5'UTR Intra-chr q32 q32 Seq+ 19246 ChimerSeq STARFusion TCGA_RNA-Seq MROH1-ARMC2 MROH1 chr8 145278133 + ARMC2 chr6 109190027 + Exonic hg19 BRCA TCGA-BH-A0C0-01A 7 6 Out-of-frame Inter-chr q24.3 q21 Seq+ 19247 ChimerSeq STARFusion TCGA_RNA-Seq SF1-ITPR1 SF1 chr11 64543970 - ITPR1 chr3 4669447 + Exonic hg19 BRCA TCGA-BH-A0C0-01A 4 9 In-Frame Inter-chr q13.1 p26.1 Seq+ 19248 ChimerSeq STARFusion TCGA_RNA-Seq MCM5-RALGAPB MCM5 chr22 35799535 + RALGAPB chr20 37182510 + Exonic hg19 BRCA TCGA-BH-A0C0-01A 2 11 In-Frame Inter-chr q12.3 q11.23 Seq+ 19249 ChimerSeq STARFusion TCGA_RNA-Seq NAA40-MARK2 NAA40 chr11 63706574 + MARK2 chr11 63676349 + Exonic hg19 BRCA TCGA-BH-A0C0-01A 2 9 Out-of-frame Intra-chr q13.1 q13.1 CAMK:CAMKL 19250 ChimerSeq STARFusion TCGA_RNA-Seq DEGS2-WARS DEGS2 chr14 100625843 - WARS chr14 100809724 - Exonic hg19 BRCA TCGA-BH-A0C0-01A 3 4 In-Frame Intra-chr q32.2 q32.2 Seq+ 19251 ChimerSeq STARFusion TCGA_RNA-Seq FLJ22447-PRKCH FLJ22447 chr14 62037478 + PRKCH chr14 61995793 + Exonic hg19 BRCA TCGA-BH-A0C0-01A 2 8 5'UTR-CDS Intra-chr q23.1 q23.1 19252 ChimerSeq STARFusion TCGA_RNA-Seq MYO6-IBTK MYO6 chr6 76624777 + IBTK chr6 82935364 - Exonic hg19 BRCA TCGA-BH-A0C0-01A 3 3 3'UTR-CDS Intra-chr q14.1 Seq+ 19253 ChimerSeq STARFusion TCGA_RNA-Seq PTK7-PTCRA PTK7 chr6 43114436 + PTCRA chr6 42890765 + Exonic hg19 BRCA TCGA-BH-A0C0-01A 2 4 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 19254 ChimerSeq STARFusion TCGA_RNA-Seq SNAPC1-HIF1A SNAPC1 chr14 62249115 + HIF1A chr14 62204805 + Exonic hg19 BRCA TCGA-BH-A0C0-01A 3 0 In-Frame Intra-chr q23.2 q23.2 Oncogene Tumor suppressor gene Transcription factor 19255 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-LCMT1 TBL1XR1 chr3 176914909 - LCMT1 chr16 25139796 + Exonic hg19 BRCA TCGA-BH-A0C0-01A 2 0 5'UTR-CDS Inter-chr q26.32 p12.1 19256 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-SLC29A3 ERBB2 chr17 37883256 + SLC29A3 chr10 73121711 + Exonic hg19 BRCA TCGA-AR-A254-01A 320 1029 Out-of-frame Inter-chr q12 Oncogene q22.1 Seq+ 19257 ChimerSeq STARFusion TCGA_RNA-Seq RARA-MSL1 RARA chr17 38487648 + MSL1 chr17 38282436 + Exonic hg19 BRCA TCGA-AR-A254-01A 37 243 CDS-5'UTR Intra-chr q21.2 Oncogene Transcription factor q21.1 Seq+ 19258 ChimerSeq STARFusion TCGA_RNA-Seq OPRL1-PRPF6 OPRL1 chr20 62711705 + PRPF6 chr20 62641553 + Exonic hg19 BRCA TCGA-AR-A254-01A 30 110 5'UTR-CDS Intra-chr q13.33 Seq+ 19259 ChimerSeq STARFusion TCGA_RNA-Seq GTF2B-BPI GTF2B chr1 89357166 - BPI chr20 36962832 + Exonic hg19 BRCA TCGA-AR-A254-01A 2 207 Out-of-frame Inter-chr p22.2 Transcription factor q11.23 Seq+ 19260 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-SOCS7 FBXL20 chr17 37557614 - SOCS7 chr17 36551562 + Exonic hg19 BRCA TCGA-AR-A254-01A 29 63 Out-of-frame Intra-chr q12 q12 Seq+ 19261 ChimerSeq STARFusion TCGA_RNA-Seq RARA-CDC6 RARA chr17 38499119 + CDC6 chr17 38450202 + Exonic hg19 BRCA TCGA-AR-A254-01A 13 79 CDS-3'UTR Intra-chr q21.2 Oncogene Transcription factor q21.2 Seq+ 19262 ChimerSeq STARFusion TCGA_RNA-Seq FAM217B-PRPF6 FAM217B chr20 58513167 + PRPF6 chr20 62657292 + Exonic hg19 BRCA TCGA-AR-A254-01A 14 72 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 19263 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-LOC100507412 WARS2 chr1 119683178 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-AR-A254-01A 12 54 CDS-5'UTR Inter-chr p12 19264 ChimerSeq STARFusion TCGA_RNA-Seq RARA-CDC6 RARA chr17 38487648 + CDC6 chr17 38450202 + Exonic hg19 BRCA TCGA-AR-A254-01A 4 79 CDS-3'UTR Intra-chr q21.2 Oncogene Transcription factor q21.2 Seq+ 19265 ChimerSeq STARFusion TCGA_RNA-Seq FAM217B-PRPF6 FAM217B chr20 58515590 + PRPF6 chr20 62657292 + Exonic hg19 BRCA TCGA-AR-A254-01A 5 72 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 19266 ChimerSeq STARFusion TCGA_RNA-Seq FAM149B1-USP6NL FAM149B1 chr10 74968544 + USP6NL chr10 11569566 - Exonic hg19 BRCA TCGA-AR-A254-01A 5 1 Out-of-frame Intra-chr q22.2 p14 Seq+ 19267 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-NOTCH2 FBXL20 chr17 37557614 - NOTCH2 chr1 120465401 - Exonic hg19 BRCA TCGA-AR-A254-01A 3 9 Out-of-frame Inter-chr q12 p12 Oncogene Tumor suppressor gene Seq+ 19268 ChimerSeq STARFusion TCGA_RNA-Seq CDC6-MSL1 CDC6 chr17 38450308 + MSL1 chr17 38282436 + Exonic hg19 BRCA TCGA-AR-A254-01A 3 7 3'UTR-5'UTR Intra-chr q21.2 q21.1 Seq+ 19269 ChimerSeq STARFusion TCGA_RNA-Seq LOC440434-CCBL2 LOC440434 chr17 36412905 - CCBL2 chr1 89430661 - Exonic hg19 BRCA TCGA-AR-A254-01A 4 2 3'UTR-CDS Inter-chr 19270 ChimerSeq STARFusion TCGA_RNA-Seq INPP5A-MIEN1 INPP5A chr10 134459472 + MIEN1 chr17 37886544 - Exonic hg19 BRCA TCGA-AR-A254-01A 2 4 In-Frame Inter-chr q26.3 q12 19271 ChimerSeq STARFusion TCGA_RNA-Seq YME1L1-SLC35D2 YME1L1 chr10 27437835 - SLC35D2 chr9 99122503 - Exonic hg19 BRCA TCGA-E2-A1IH-01A 6 33 In-Frame Inter-chr p12.1 q22.32 Seq+ 19272 ChimerSeq STARFusion TCGA_RNA-Seq YME1L1-SLC35D2 YME1L1 chr10 27437835 - SLC35D2 chr9 99107683 - Exonic hg19 BRCA TCGA-E2-A1IH-01A 2 33 Out-of-frame Inter-chr p12.1 q22.32 Seq+ 19273 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF10-DEFA6 ARHGEF10 chr8 1817416 + DEFA6 chr8 6783568 - Exonic hg19 BRCA TCGA-E2-A1IH-01A 4 12 CDS-5'UTR Intra-chr p23.1 Seq+ 19274 ChimerSeq STARFusion TCGA_RNA-Seq PPIP5K1-CATSPER2 PPIP5K1 chr15 43856301 - CATSPER2 chr15 43939665 - Exonic hg19 BRCA TCGA-E2-A1IH-01A 2 1 In-Frame Intra-chr q15.3 q15.3 19275 ChimerSeq STARFusion TCGA_RNA-Seq CHD2-LOC100507217 CHD2 chr15 93444529 + LOC100507217 chr15 93428745 + Exonic hg19 BRCA TCGA-E2-A1IH-01A 2 0 CDS-5'UTR Intra-chr q26.1 19276 ChimerSeq STARFusion TCGA_RNA-Seq PDE4DIP-SEC22B PDE4DIP chr1 145015860 - SEC22B chr1 145103908 + Exonic hg19 BRCA TCGA-E2-A1IH-01A 2 0 In-Frame Intra-chr q21.2 Oncogene p12 19277 ChimerSeq STARFusion TCGA_RNA-Seq SP100-MON2 SP100 chr2 231375881 + MON2 chr12 62979074 + Exonic hg19 BRCA TCGA-E2-A1IH-01A 2 0 Out-of-frame Inter-chr q37.1 Tumor suppressor gene Transcription factor q14.1 19278 ChimerSeq STARFusion TCGA_RNA-Seq WAC-MAP3K8 WAC chr10 28824686 + MAP3K8 chr10 30727845 + Exonic hg19 BRCA TCGA-E2-A1IH-01A 2 0 5'UTR-5'UTR Intra-chr p12.1 p11.23 STE:STE11 Tumor suppressor gene 19279 ChimerSeq STARFusion TCGA_RNA-Seq TGFBR3-LOC283693 TGFBR3 chr1 92351435 - LOC283693 chr15 83407366 - Exonic hg19 BRCA TCGA-AR-A2LQ-01A 2 0 3'UTR-3'UTR Inter-chr p22.1 Tumor suppressor gene 19280 ChimerSeq STARFusion TCGA_RNA-Seq PRDX6-Y_RNA PRDX6 chr1 173457548 + Y_RNA chr20 55886935 + Exonic hg19 BRCA TCGA-E2-A15G-01A 7 0 Out-of-frame Inter-chr q25.1 19281 ChimerSeq STARFusion TCGA_RNA-Seq LMLN-LRCH3 LMLN chr3 197729996 + LRCH3 chr3 197553749 + Exonic hg19 BRCA TCGA-E2-A15G-01A 2 5 Out-of-frame Intra-chr q29 q29 19282 ChimerSeq STARFusion TCGA_RNA-Seq LDLRAD3-KLKP1 LDLRAD3 chr11 36120011 + KLKP1 chr19 51391130 - Exonic hg19 BRCA TCGA-S3-AA17-01A 3 7 CDS-3'UTR Inter-chr p13 q13.33 Seq+ 19283 ChimerSeq STARFusion TCGA_RNA-Seq TCP11L1-SYT9 TCP11L1 chr11 33094199 + SYT9 chr11 7324270 + Exonic hg19 BRCA TCGA-S3-AA17-01A 3 5 Out-of-frame Intra-chr p13 p15.4 Seq+ 19284 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1467-EMP1 KIAA1467 chr12 13224330 + EMP1 chr12 13364403 + Exonic hg19 BRCA TCGA-S3-AA17-01A 3 4 CDS-5'UTR Intra-chr p13.1 Tumor suppressor gene 19285 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1467-EMP1 KIAA1467 chr12 13229077 + EMP1 chr12 13364403 + Exonic hg19 BRCA TCGA-S3-AA17-01A 2 4 CDS-5'UTR Intra-chr p13.1 Tumor suppressor gene 19286 ChimerSeq STARFusion TCGA_RNA-Seq ZMYM2-PSPC1 ZMYM2 chr13 20534166 + PSPC1 chr13 20251963 - Exonic hg19 BRCA TCGA-S3-AA17-01A 2 1 5'UTR-3'UTR Intra-chr q12.11 q12.11 19287 ChimerSeq STARFusion TCGA_RNA-Seq ATP2B1-KCNC2 ATP2B1 chr12 90004970 - KCNC2 chr12 75442097 - Exonic hg19 BRCA TCGA-E9-A5UO-01A 4 34 Out-of-frame Intra-chr q21.33 q21.1 Seq+ 19288 ChimerSeq STARFusion TCGA_RNA-Seq ATXN1-HMGCLL1 ATXN1 chr6 16486203 - HMGCLL1 chr6 55406938 - Exonic hg19 BRCA TCGA-E9-A5UO-01A 5 25 5'UTR-CDS Intra-chr p22.3 p12.1 Seq+ 19289 ChimerSeq STARFusion TCGA_RNA-Seq ETFA-STRA6 ETFA chr15 76566753 - STRA6 chr15 74494623 - Exonic hg19 BRCA TCGA-E9-A5UO-01A 2 22 In-Frame Intra-chr q24.3 q24.1 Seq+ 19290 ChimerSeq STARFusion TCGA_RNA-Seq FGD6-NUP37 FGD6 chr12 95546587 - NUP37 chr12 102479634 - Exonic hg19 BRCA TCGA-E9-A5UO-01A 4 12 Out-of-frame Intra-chr q22 q23.2 Seq+ 19291 ChimerSeq STARFusion TCGA_RNA-Seq ENPP5-EPYC ENPP5 chr6 46133124 - EPYC chr12 91358103 - Exonic hg19 BRCA TCGA-E9-A5UO-01A 4 8 Out-of-frame Inter-chr p21.1 q21.33 Seq+ 19292 ChimerSeq STARFusion TCGA_RNA-Seq DPP8-TICRR DPP8 chr15 65790202 - TICRR chr15 90135278 + Exonic hg19 BRCA TCGA-D8-A1Y2-01A 2 5 Out-of-frame Intra-chr q22.31 q26.1 Seq+ 19293 ChimerSeq STARFusion TCGA_RNA-Seq PDS5B-STARD13 PDS5B chr13 33160730 + STARD13 chr13 34098509 - Exonic hg19 BRCA TCGA-D8-A1Y2-01A 3 1 5'UTR-5'UTR Intra-chr q13.1 Tumor suppressor gene q13.1 Tumor suppressor gene 19294 ChimerSeq STARFusion TCGA_RNA-Seq TRPS1-LOC286189 TRPS1 chr8 116599228 - LOC286189 chr8 69218833 - Exonic hg19 BRCA TCGA-E2-A1B0-01A 43 92 CDS-3'UTR Intra-chr q23.3 Transcription factor 19295 ChimerSeq STARFusion TCGA_RNA-Seq ARFGEF1-LOC729506 ARFGEF1 chr8 68200190 - LOC729506 chr5 8387822 - Exonic hg19 BRCA TCGA-E2-A1B0-01A 8 20 CDS-3'UTR Inter-chr q13.2 19296 ChimerSeq STARFusion TCGA_RNA-Seq UBE2W-LOC100616530 UBE2W chr8 74791043 - LOC100616530 chr8 96313350 + Exonic hg19 BRCA TCGA-E2-A1B0-01A 11 7 CDS-5'UTR Intra-chr q21.11 19297 ChimerSeq STARFusion TCGA_RNA-Seq TRPS1-FAM84B TRPS1 chr8 116680772 - FAM84B chr8 127565748 - Exonic hg19 BRCA TCGA-E2-A1B0-01A 6 23 5'UTR-3'UTR Intra-chr q23.3 Transcription factor q24.21 Seq+ 19298 ChimerSeq STARFusion TCGA_RNA-Seq NUCKS1-SLC26A9 NUCKS1 chr1 205719085 - SLC26A9 chr1 205902212 - Exonic hg19 BRCA TCGA-E2-A1B0-01A 7 5 In-Frame Intra-chr q32.1 q32.1 Seq+ 19299 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-TANC2 SEPT9 chr17 75277636 + TANC2 chr17 61457079 + Exonic hg19 BRCA TCGA-E2-A1B0-01A 5 13 Out-of-frame Intra-chr q23.2 Seq+ 19300 ChimerSeq STARFusion TCGA_RNA-Seq RNF170-HOOK3 RNF170 chr8 42742871 - HOOK3 chr8 42761316 + Exonic hg19 BRCA TCGA-E2-A1B0-01A 6 7 Out-of-frame Intra-chr p11.21 p11.21 Oncogene Seq+ 19301 ChimerSeq STARFusion TCGA_RNA-Seq UBE2W-LOC100616530 UBE2W chr8 74791043 - LOC100616530 chr8 96444854 + Exonic hg19 BRCA TCGA-E2-A1B0-01A 5 7 CDS-5'UTR Intra-chr q21.11 19302 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-TANC2 SEPT9 chr17 75284292 + TANC2 chr17 61457079 + Exonic hg19 BRCA TCGA-E2-A1B0-01A 3 13 5'UTR-CDS Intra-chr q23.2 Seq+ 19303 ChimerSeq STARFusion TCGA_RNA-Seq HOOK3-SLC20A2 HOOK3 chr8 42785315 + SLC20A2 chr8 42287767 - Exonic hg19 BRCA TCGA-E2-A1B0-01A 2 11 Out-of-frame Intra-chr p11.21 Oncogene p11.21 19304 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-TAGLN2 RNA45S5 chrUn_gl000220 110500 + TAGLN2 chr1 159887984 - Exonic hg19 BRCA TCGA-E2-A1B0-01A 3 3 Out-of-frame Inter-chr q23.2 19305 ChimerSeq STARFusion TCGA_RNA-Seq CPE-SMIM14 CPE chr4 166300680 + SMIM14 chr4 39574083 - Exonic hg19 BRCA TCGA-E2-A1B0-01A 2 6 Out-of-frame Intra-chr q32.3 p14 Seq+ 19306 ChimerSeq STARFusion TCGA_RNA-Seq B3GNTL1-ARHGAP44 B3GNTL1 chr17 80962991 - ARHGAP44 chr17 12798257 + Exonic hg19 BRCA TCGA-E2-A1B0-01A 2 1 Out-of-frame Intra-chr p12 19307 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-POLR1A IGL@ chr22 23135475 + POLR1A chr2 86248619 - Exonic hg19 BRCA TCGA-EW-A6SB-01A 123 0 Out-of-frame Inter-chr q11.22 p11.2 19308 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SNRPA IGH@ chr14 106518399 - SNRPA chr19 41268869 + Exonic hg19 BRCA TCGA-EW-A6SB-01A 46 1 Out-of-frame Inter-chr 32.33 q13.2 19309 ChimerSeq STARFusion TCGA_RNA-Seq RHOA-SMCO1 RHOA chr3 49449253 - SMCO1 chr3 196236540 - Exonic hg19 BRCA TCGA-EW-A6SB-01A 22 36 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene q29 Seq+ 19310 ChimerSeq STARFusion TCGA_RNA-Seq SNX22-IGHM SNX22 chr15 64444708 + IGHM chr14 106330074 - Exonic hg19 BRCA TCGA-EW-A6SB-01A 23 1 Out-of-frame Inter-chr q22.31 q32.33 19311 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-NOTCH1 IGHG1 chr14 106134591 - NOTCH1 chr9 139403429 - Exonic hg19 BRCA TCGA-EW-A6SB-01A 22 1 Out-of-frame Inter-chr q32.33 q34.3 Oncogene Tumor suppressor gene 19312 ChimerSeq STARFusion TCGA_RNA-Seq TRPS1-SPAG1 TRPS1 chr8 116599228 - SPAG1 chr8 101252631 + Exonic hg19 BRCA TCGA-EW-A6SB-01A 7 26 In-Frame Intra-chr q23.3 Transcription factor q22.2 Seq+ 19313 ChimerSeq STARFusion TCGA_RNA-Seq TRPS1-SPAG1 TRPS1 chr8 116599228 - SPAG1 chr8 101251468 + Exonic hg19 BRCA TCGA-EW-A6SB-01A 4 26 In-Frame Intra-chr q23.3 Transcription factor q22.2 Seq+ 19314 ChimerSeq STARFusion TCGA_RNA-Seq CAPZB-EMC1 CAPZB chr1 19683129 - EMC1 chr1 19553944 - Exonic hg19 BRCA TCGA-EW-A6SB-01A 6 17 Out-of-frame Intra-chr p36.13 p36.13 Seq+ 19315 ChimerSeq STARFusion TCGA_RNA-Seq BCL2L14-ETV6 BCL2L14 chr12 12232672 + ETV6 chr12 11992074 + Exonic hg19 BRCA TCGA-EW-A6SB-01A 4 5 In-Frame Intra-chr p13.2 Tumor suppressor gene Transcription factor Seq+ 19316 ChimerSeq STARFusion TCGA_RNA-Seq NUBPL-SCFD1 NUBPL chr14 32034254 + SCFD1 chr14 31163979 + Exonic hg19 BRCA TCGA-EW-A6SB-01A 2 10 In-Frame Intra-chr q12 q12 Seq+ 19317 ChimerSeq STARFusion TCGA_RNA-Seq IKBKB-ANK1 IKBKB chr8 42129723 + ANK1 chr8 41566493 - Exonic hg19 BRCA TCGA-EW-A6SB-01A 2 6 In-Frame Intra-chr p11.21 Oncogene p11.21 Seq+ 19318 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS17-LRRC28 ADAMTS17 chr15 100589062 - LRRC28 chr15 99901541 + Exonic hg19 BRCA TCGA-A2-A4RW-01A 18 44 In-Frame Intra-chr q26.3 q26.3 Seq+ 19319 ChimerSeq STARFusion TCGA_RNA-Seq LRRK1-ADAMTS17 LRRK1 chr15 101529603 + ADAMTS17 chr15 100591936 - Exonic hg19 BRCA TCGA-A2-A4RW-01A 7 31 In-Frame Intra-chr q26.3 TKL:LRRK q26.3 Seq+ 19320 ChimerSeq STARFusion TCGA_RNA-Seq CDH1-NADK2 CDH1 chr16 68772314 + NADK2 chr5 36201263 - Exonic hg19 BRCA TCGA-A2-A4RW-01A 4 20 Out-of-frame Inter-chr q22.1 Oncogene Tumor suppressor gene p13.2 Seq+ 19321 ChimerSeq STARFusion TCGA_RNA-Seq MAST2-C6orf52 MAST2 chr1 46348067 + C6orf52 chr6 10683465 - Exonic hg19 BRCA TCGA-A2-A4RW-01A 3 24 Out-of-frame Inter-chr p34.1 AGC:MAST p24.2 Seq+ 19322 ChimerSeq STARFusion TCGA_RNA-Seq MAST2-C6orf52 MAST2 chr1 46425149 + C6orf52 chr6 10687397 - Exonic hg19 BRCA TCGA-A2-A4RW-01A 2 24 Out-of-frame Inter-chr p34.1 AGC:MAST p24.2 Seq+ 19323 ChimerSeq STARFusion TCGA_RNA-Seq MAST2-C6orf52 MAST2 chr1 46425149 + C6orf52 chr6 10683465 - Exonic hg19 BRCA TCGA-A2-A4RW-01A 2 24 Out-of-frame Inter-chr p34.1 AGC:MAST p24.2 Seq+ 19324 ChimerSeq STARFusion TCGA_RNA-Seq COASY-IGHA1 COASY chr17 40714609 + IGHA1 chr14 106175003 - Exonic hg19 BRCA TCGA-A2-A4RW-01A 5 0 Out-of-frame Inter-chr q21.2 19325 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-PSD3 WHSC1L1 chr8 38146005 - PSD3 chr8 18513195 - Exonic hg19 BRCA TCGA-BH-A18U-01A 100 311 In-Frame Intra-chr p11.23 Tumor suppressor gene p22 Seq+ 19326 ChimerSeq STARFusion TCGA_RNA-Seq RAD54L2-ERC2 RAD54L2 chr3 51575666 + ERC2 chr3 55545304 - Exonic hg19 BRCA TCGA-BH-A18U-01A 12 14 5'UTR-3'UTR Intra-chr p21.2 p14.3 Seq+ 19327 ChimerSeq STARFusion TCGA_RNA-Seq BZW2-CLCN3 BZW2 chr7 16685913 + CLCN3 chr4 170601201 + Exonic hg19 BRCA TCGA-BH-A18U-01A 7 15 5'UTR-CDS Inter-chr p21.1 q33 Seq+ 19328 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L2-UBE2E3 DIS3L2 chr2 233164829 + UBE2E3 chr2 181848770 + Exonic hg19 BRCA TCGA-BH-A18U-01A 2 19 In-Frame Intra-chr q37.1 q31.3 Seq+ 19329 ChimerSeq STARFusion TCGA_RNA-Seq ADK-LRRTM3 ADK chr10 76430027 + LRRTM3 chr10 68857345 + Exonic hg19 BRCA TCGA-BH-A18U-01A 2 14 Out-of-frame Intra-chr q22.2 q21.3 Seq+ 19330 ChimerSeq STARFusion TCGA_RNA-Seq KDM4B-UBXN6 KDM4B chr19 4969241 + UBXN6 chr19 4447622 - Exonic hg19 BRCA TCGA-BH-A18U-01A 4 4 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 19331 ChimerSeq STARFusion TCGA_RNA-Seq ZZEF1-CCDC144A ZZEF1 chr17 3928213 - CCDC144A chr17 16610786 + Exonic hg19 BRCA TCGA-BH-A18U-01A 3 6 Out-of-frame Intra-chr p13.2 p11.2 Seq+ 19332 ChimerSeq STARFusion TCGA_RNA-Seq ZZEF1-CCDC144A ZZEF1 chr17 3928213 - CCDC144A chr17 16610783 + Exonic hg19 BRCA TCGA-BH-A18U-01A 3 6 Out-of-frame Intra-chr p13.2 p11.2 Seq+ 19333 ChimerSeq STARFusion TCGA_RNA-Seq RHOT1-FGFR1 RHOT1 chr17 30469748 + FGFR1 chr8 38315052 - Exonic hg19 BRCA TCGA-BH-A18U-01A 2 8 Out-of-frame Inter-chr q11.2 p11.23 TK:FGFR Oncogene Seq+ 19334 ChimerSeq STARFusion TCGA_RNA-Seq LARGE-ATP6V1E1 LARGE chr22 33960834 - ATP6V1E1 chr22 18096086 - Exonic hg19 BRCA TCGA-BH-A18U-01A 2 3 Out-of-frame Intra-chr q11.21 19335 ChimerSeq STARFusion TCGA_RNA-Seq PKM-MCTP2 PKM chr15 72509750 - MCTP2 chr15 94942190 + Exonic hg19 BRCA TCGA-B6-A0IO-01A 4 29 Out-of-frame Intra-chr q23 q26.2 Seq+ 19336 ChimerSeq STARFusion TCGA_RNA-Seq BBS4-TTC23 BBS4 chr15 73024067 + TTC23 chr15 99762069 - Exonic hg19 BRCA TCGA-B6-A0IO-01A 6 18 Out-of-frame Intra-chr q24.1 q26.3 Seq+ 19337 ChimerSeq STARFusion TCGA_RNA-Seq TMEM50B-DONSON TMEM50B chr21 34804967 - DONSON chr21 34951868 - Exonic hg19 BRCA TCGA-B6-A0IO-01A 7 13 3'UTR-CDS Intra-chr q22.11 19338 ChimerSeq STARFusion TCGA_RNA-Seq PDE8A-CIB1 PDE8A chr15 85525579 + CIB1 chr15 90776935 - Exonic hg19 BRCA TCGA-B6-A0IO-01A 5 14 In-Frame Intra-chr q25.3 q26.1 Seq+ 19339 ChimerSeq STARFusion TCGA_RNA-Seq PDE8A-CIB1 PDE8A chr15 85525579 + CIB1 chr15 90774739 - Exonic hg19 BRCA TCGA-B6-A0IO-01A 4 14 In-Frame Intra-chr q25.3 q26.1 Seq+ 19340 ChimerSeq STARFusion TCGA_RNA-Seq PDE8A-CIB1 PDE8A chr15 85525579 + CIB1 chr15 90774445 - Exonic hg19 BRCA TCGA-B6-A0IO-01A 2 14 Out-of-frame Intra-chr q25.3 q26.1 Seq+ 19341 ChimerSeq STARFusion TCGA_RNA-Seq PRPF39-PSMA6 PRPF39 chr14 45553452 + PSMA6 chr14 35777200 + Exonic hg19 BRCA TCGA-B6-A0IO-01A 2 3 5'UTR-CDS Intra-chr q21.2 q13.2 Seq+ 19342 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF3-LTF ARHGEF3 chr3 56835731 - LTF chr3 46501309 - Exonic hg19 BRCA TCGA-5L-AAT0-01A 11 35 Out-of-frame Intra-chr p14.3 p21.31 Oncogene Tumor suppressor gene Transcription factor Seq+ 19343 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF3-LTF ARHGEF3 chr3 56835731 - LTF chr3 46509809 - Exonic hg19 BRCA TCGA-5L-AAT0-01A 9 32 CDS-5'UTR Intra-chr p14.3 p21.31 Oncogene Tumor suppressor gene Transcription factor Seq+ 19344 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF3-LTF ARHGEF3 chr3 56835731 - LTF chr3 46511956 - Exonic hg19 BRCA TCGA-5L-AAT0-01A 3 32 CDS-5'UTR Intra-chr p14.3 p21.31 Oncogene Tumor suppressor gene Transcription factor Seq+ 19345 ChimerSeq STARFusion TCGA_RNA-Seq SRP14-POU3F2 SRP14 chr15 40328539 - POU3F2 chr6 99283182 + Exonic hg19 BRCA TCGA-5L-AAT0-01A 6 14 Out-of-frame Inter-chr q15.1 q16.1 Transcription factor 19346 ChimerSeq STARFusion TCGA_RNA-Seq ZNF587-ZSCAN4 ZNF587 chr19 58361439 + ZSCAN4 chr19 58187409 + Exonic hg19 BRCA TCGA-A2-A04X-01A 12 8 CDS-5'UTR Intra-chr q13.43 Transcription factor q13.43 Transcription factor Seq+ 19347 ChimerSeq STARFusion TCGA_RNA-Seq SNX27-ADAR SNX27 chr1 151611595 + ADAR chr1 154575102 - Exonic hg19 BRCA TCGA-A2-A04X-01A 5 29 In-Frame Intra-chr q21.3 q21.3 Seq+ 19348 ChimerSeq STARFusion TCGA_RNA-Seq MYO1D-FAIM3 MYO1D chr17 30980861 - FAIM3 chr1 207078492 - Exonic hg19 BRCA TCGA-A2-A04X-01A 5 13 In-Frame Inter-chr q11.2 Seq+ 19349 ChimerSeq STARFusion TCGA_RNA-Seq MYO1D-FAIM3 MYO1D chr17 30980861 - FAIM3 chr1 207087439 - Exonic hg19 BRCA TCGA-A2-A04X-01A 2 13 Out-of-frame Inter-chr q11.2 Seq+ 19350 ChimerSeq STARFusion TCGA_RNA-Seq SARDH-ELK2AP SARDH chr9 136568038 - ELK2AP chr14 106136181 - Exonic hg19 BRCA TCGA-A2-A04X-01A 3 1 CDS-3'UTR Inter-chr q34.2 19351 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-KIAA1432 IGL@ chr22 23135479 + KIAA1432 chr9 5772604 + Exonic hg19 BRCA TCGA-A2-A0SW-01A 57 0 Out-of-frame Inter-chr q11.22 19352 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-KIAA1432 IGL@ chr22 23040893 + KIAA1432 chr9 5772604 + Exonic hg19 BRCA TCGA-A2-A0SW-01A 56 0 Out-of-frame Inter-chr q11.22 19353 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-POMGNT1 IGH@ chr14 107083255 - POMGNT1 chr1 46657291 - Exonic hg19 BRCA TCGA-A2-A0SW-01A 30 2 Out-of-frame Inter-chr 32.33 p34.1 19354 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-POMGNT1 IGH@ chr14 107095125 - POMGNT1 chr1 46657291 - Exonic hg19 BRCA TCGA-A2-A0SW-01A 22 2 Out-of-frame Inter-chr 32.33 p34.1 19355 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-POMGNT1 IGH@ chr14 107048671 - POMGNT1 chr1 46657291 - Exonic hg19 BRCA TCGA-A2-A0SW-01A 17 2 Out-of-frame Inter-chr 32.33 p34.1 19356 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-NOTCH1 IGHG1 chr14 106134590 - NOTCH1 chr9 139403428 - Exonic hg19 BRCA TCGA-A2-A0SW-01A 7 1 Out-of-frame Inter-chr q32.33 q34.3 Oncogene Tumor suppressor gene 19357 ChimerSeq STARFusion TCGA_RNA-Seq PPFIBP2-OLFML1 PPFIBP2 chr11 7663657 + OLFML1 chr11 7530629 + Exonic hg19 BRCA TCGA-A2-A0SW-01A 2 11 Out-of-frame Intra-chr p15.4 p15.4 Seq+ 19358 ChimerSeq STARFusion TCGA_RNA-Seq IPPK-ASPN IPPK chr9 95396668 - ASPN chr9 95237209 - Exonic hg19 BRCA TCGA-A2-A0SW-01A 3 5 CDS-5'UTR Intra-chr q22.31 q22.31 Seq+ 19359 ChimerSeq STARFusion TCGA_RNA-Seq SESTD1-ACMSD SESTD1 chr2 180129226 - ACMSD chr2 135655911 + Exonic hg19 BRCA TCGA-E2-A15S-01A 4 13 5'UTR-CDS Intra-chr q31.2 q21.3 Seq+ 19360 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN15-VPS26A TSPAN15 chr10 71211446 + VPS26A chr10 70915568 + Exonic hg19 BRCA TCGA-E2-A15S-01A 4 3 In-Frame Intra-chr q22.1 q22.1 Seq+ 19361 ChimerSeq STARFusion TCGA_RNA-Seq MBOAT1-FYN MBOAT1 chr6 20212367 - FYN chr6 111983150 - Exonic hg19 BRCA TCGA-OL-A6VO-01A 17 56 Out-of-frame Intra-chr p22.3 q21 TK:Src Seq+ 19362 ChimerSeq STARFusion TCGA_RNA-Seq RERE-ENO1 RERE chr1 8877219 - ENO1 chr1 8930569 - Exonic hg19 BRCA TCGA-OL-A6VO-01A 9 84 5'UTR-CDS Intra-chr p36.23 p36.23 Seq+ 19363 ChimerSeq STARFusion TCGA_RNA-Seq RERE-ENO1 RERE chr1 8852463 - ENO1 chr1 8930569 - Exonic hg19 BRCA TCGA-OL-A6VO-01A 3 84 5'UTR-CDS Intra-chr p36.23 p36.23 Seq+ 19364 ChimerSeq STARFusion TCGA_RNA-Seq CD2AP-BLOC1S5 CD2AP chr6 47522502 + BLOC1S5 chr6 8016061 - Exonic hg19 BRCA TCGA-OL-A6VO-01A 8 47 Out-of-frame Intra-chr p12.3 p24.3 Seq+ 19365 ChimerSeq STARFusion TCGA_RNA-Seq CAMK1D-FAM188A CAMK1D chr10 12708809 + FAM188A chr10 15824225 - Exonic hg19 BRCA TCGA-OL-A6VO-01A 6 28 Out-of-frame Intra-chr p13 Tumor suppressor gene Seq+ 19366 ChimerSeq STARFusion TCGA_RNA-Seq STAG1-MSL2 STAG1 chr3 136349712 - MSL2 chr3 135871580 - Exonic hg19 BRCA TCGA-OL-A6VO-01A 2 12 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 19367 ChimerSeq STARFusion TCGA_RNA-Seq AGSK1-LOC388152 AGSK1 chr15 82764745 - LOC388152 chr15 84868719 - Exonic hg19 BRCA TCGA-OL-A6VO-01A 3 5 Out-of-frame Intra-chr 19368 ChimerSeq STARFusion TCGA_RNA-Seq OSGIN2-RIPK2 OSGIN2 chr8 90926974 + RIPK2 chr8 90775057 + Exonic hg19 BRCA TCGA-OL-A6VO-01A 2 9 Out-of-frame Intra-chr q21.3 q21.3 TKL:RIPK Seq+ 19369 ChimerSeq STARFusion TCGA_RNA-Seq IGFBP5-GAK IGFBP5 chr2 217543575 - GAK chr4 860759 - Exonic hg19 BRCA TCGA-A8-A0A2-01A 4 1 Out-of-frame Inter-chr q35 Tumor suppressor gene p16.3 Other:NAK 19370 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-FTO ACTN4 chr19 39138547 + FTO chr16 53844052 + Exonic hg19 BRCA TCGA-E2-A150-01A 80 330 In-Frame Inter-chr q12.2 Seq+ 19371 ChimerSeq STARFusion TCGA_RNA-Seq MAL2-FLJ45974 MAL2 chr8 120233997 + FLJ45974 chr7 53759782 - Exonic hg19 BRCA TCGA-E2-A150-01A 24 76 CDS-3'UTR Inter-chr q24.12 19372 ChimerSeq STARFusion TCGA_RNA-Seq MPDZ-LURAP1L MPDZ chr9 13247634 - LURAP1L chr9 12821385 + Exonic hg19 BRCA TCGA-E2-A150-01A 13 66 In-Frame Intra-chr p23 p23 Seq+ 19373 ChimerSeq STARFusion TCGA_RNA-Seq DSTN-CCT6A DSTN chr20 17550856 + CCT6A chr7 56120115 + Exonic hg19 BRCA TCGA-E2-A150-01A 20 24 Out-of-frame Inter-chr p12.1 p11.2 Seq+ 19374 ChimerSeq STARFusion TCGA_RNA-Seq MAL2-FLJ45974 MAL2 chr8 120233997 + FLJ45974 chr7 53725141 - Exonic hg19 BRCA TCGA-E2-A150-01A 7 76 CDS-3'UTR Inter-chr q24.12 19375 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57728677 + VMP1 chr17 57886157 + Exonic hg19 BRCA TCGA-E2-A150-01A 14 36 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 19376 ChimerSeq STARFusion TCGA_RNA-Seq DSTN-CCT6A DSTN chr20 17550856 + CCT6A chr7 56122062 + Exonic hg19 BRCA TCGA-E2-A150-01A 13 24 In-Frame Inter-chr p12.1 p11.2 Seq+ 19377 ChimerSeq STARFusion TCGA_RNA-Seq LRP5-ZNF507 LRP5 chr11 68197168 + ZNF507 chr19 32873373 + Exonic hg19 BRCA TCGA-E2-A150-01A 2 13 Out-of-frame Inter-chr q13.2 q13.11 Transcription factor Seq+ 19378 ChimerSeq STARFusion TCGA_RNA-Seq BOK-ING5 BOK chr2 242498408 + ING5 chr2 242644068 + Exonic hg19 BRCA TCGA-E2-A150-01A 2 9 5'UTR-CDS Intra-chr q37.3 q37.3 Tumor suppressor gene Seq+ 19379 ChimerSeq STARFusion TCGA_RNA-Seq CPT1A-LPCAT2 CPT1A chr11 68529003 - LPCAT2 chr16 55583189 + Exonic hg19 BRCA TCGA-E2-A150-01A 2 9 Out-of-frame Inter-chr q13.3 q12.2 Seq+ 19380 ChimerSeq STARFusion TCGA_RNA-Seq LANCL2-VSTM2A LANCL2 chr7 55459603 + VSTM2A chr7 54612315 + Exonic hg19 BRCA TCGA-E2-A150-01A 2 6 In-Frame Intra-chr p11.2 p11.2 19381 ChimerSeq STARFusion TCGA_RNA-Seq TMEM66-ATF7IP TMEM66 chr8 29927158 - ATF7IP chr12 14649234 + Exonic hg19 BRCA TCGA-E2-A150-01A 3 0 In-Frame Inter-chr p13.1 19382 ChimerSeq STARFusion TCGA_RNA-Seq ZNF18-TASP1 ZNF18 chr17 11887430 - TASP1 chr20 13398168 - Exonic hg19 BRCA TCGA-A2-A0SU-01A 2 9 In-Frame Inter-chr p12 Transcription factor p12.1 Seq+ 19383 ChimerSeq STARFusion TCGA_RNA-Seq DAPK2-HERC1 DAPK2 chr15 64275732 - HERC1 chr15 63901465 - Exonic hg19 BRCA TCGA-A2-A0SU-01A 2 1 Out-of-frame Intra-chr q22.31 CAMK:DAPK Tumor suppressor gene q22.31 19384 ChimerSeq STARFusion TCGA_RNA-Seq MYO1E-SIL1 MYO1E chr15 59548483 - SIL1 chr5 138463542 - Exonic hg19 BRCA TCGA-A2-A0SU-01A 2 0 CDS-5'UTR Inter-chr q22.2 q31.2 Seq+ 19385 ChimerSeq STARFusion TCGA_RNA-Seq DLG5-COX6C DLG5 chr10 79589975 - COX6C chr8 100904280 - Exonic hg19 BRCA TCGA-GM-A2DM-01A 2 1 CDS-5'UTR Inter-chr q22.3 q22.2 19386 ChimerSeq STARFusion TCGA_RNA-Seq DIAPH3-TDRD3 DIAPH3 chr13 60667762 - TDRD3 chr13 61141659 + Exonic hg19 BRCA TCGA-AN-A0FY-01A 45 228 In-Frame Intra-chr q21.2 q21.2 Seq+ 19387 ChimerSeq STARFusion TCGA_RNA-Seq SYCP2-BCAS1 SYCP2 chr20 58440443 - BCAS1 chr20 52574036 - Exonic hg19 BRCA TCGA-AN-A0FY-01A 3 28 In-Frame Intra-chr q13.33 q13.2 Seq+ 19388 ChimerSeq STARFusion TCGA_RNA-Seq UBE2C-CDH26 UBE2C chr20 44443109 + CDH26 chr20 58544022 + Exonic hg19 BRCA TCGA-AN-A0FY-01A 4 20 In-Frame Intra-chr q13.12 q13.33 Seq+ 19389 ChimerSeq STARFusion TCGA_RNA-Seq LOC284757-BUD13 LOC284757 chr20 58755971 + BUD13 chr11 116636162 - Exonic hg19 BRCA TCGA-AN-A0FY-01A 2 4 5'UTR-CDS Inter-chr q23.3 19390 ChimerSeq STARFusion TCGA_RNA-Seq VAPB-GNAS VAPB chr20 56964573 + GNAS chr20 57470667 + Exonic hg19 BRCA TCGA-AN-A0FY-01A 2 3 In-Frame Intra-chr q13.32 q13.32 Oncogene Seq+ 19391 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF3-ACP6 ARHGEF3 chr3 56916320 - ACP6 chr1 147131890 - Exonic hg19 BRCA TCGA-AO-A0J6-01A 6 37 In-Frame Inter-chr p14.3 q21.2 Seq+ 19392 ChimerSeq STARFusion TCGA_RNA-Seq TCF7L2-TACC2 TCF7L2 chr10 114799885 + TACC2 chr10 123954555 + Exonic hg19 BRCA TCGA-AO-A0J6-01A 2 4 Out-of-frame Intra-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q26.13 Seq+ 19393 ChimerSeq STARFusion TCGA_RNA-Seq NEXN-AK5 NEXN chr1 78399164 + AK5 chr1 77949002 + Exonic hg19 BRCA TCGA-B6-A0X1-01A 11 54 In-Frame Intra-chr p31.1 p31.1 Seq+ 19394 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 124904503 - SCARB1 chr12 125302253 - Exonic hg19 BRCA TCGA-B6-A0X1-01A 7 10 In-Frame Intra-chr q24.31 q24.31 Seq+ 19395 ChimerSeq STARFusion TCGA_RNA-Seq ASAP1-KCNH1 ASAP1 chr8 131088594 - KCNH1 chr1 210977508 - Exonic hg19 BRCA TCGA-B6-A0X1-01A 5 8 In-Frame Inter-chr q24.22 Seq+ 19396 ChimerSeq STARFusion TCGA_RNA-Seq ANO9-DEAF1 ANO9 chr11 428088 - DEAF1 chr11 654051 - Exonic hg19 BRCA TCGA-B6-A0X1-01A 3 13 Out-of-frame Intra-chr p15.5 Transcription factor Seq+ 19397 ChimerSeq STARFusion TCGA_RNA-Seq TRIM2-ARFIP1 TRIM2 chr4 154125712 + ARFIP1 chr4 153750777 + Exonic hg19 BRCA TCGA-B6-A0X1-01A 2 11 CDS-5'UTR Intra-chr q31.3 q31.3 Seq+ 19398 ChimerSeq STARFusion TCGA_RNA-Seq DDX42-HSF5 DDX42 chr17 61851736 + HSF5 chr17 56499791 - Exonic hg19 BRCA TCGA-B6-A0X1-01A 2 10 5'UTR-CDS Intra-chr q23.3 q22 Transcription factor Seq+ 19399 ChimerSeq STARFusion TCGA_RNA-Seq CGNL1-TCF12 CGNL1 chr15 57836795 + TCF12 chr15 57574643 + Exonic hg19 BRCA TCGA-B6-A0X1-01A 4 1 Out-of-frame Intra-chr q21.3 q21.3 Oncogene Transcription factor Seq+ 19400 ChimerSeq STARFusion TCGA_RNA-Seq PTPRU-EPB41 PTPRU chr1 29563229 + EPB41 chr1 29356912 + Exonic hg19 BRCA TCGA-B6-A0X1-01A 3 5 Out-of-frame Intra-chr p35.3 p35.3 Tumor suppressor gene Seq+ 19401 ChimerSeq STARFusion TCGA_RNA-Seq DCAF6-RCSD1 DCAF6 chr1 167906246 + RCSD1 chr1 167653137 + Exonic hg19 BRCA TCGA-B6-A0X1-01A 2 6 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 19402 ChimerSeq STARFusion TCGA_RNA-Seq SLC43A2-SCARF1 SLC43A2 chr17 1486498 - SCARF1 chr17 1538911 - Exonic hg19 BRCA TCGA-B6-A0X1-01A 2 6 In-Frame Intra-chr p13.3 Seq+ 19403 ChimerSeq STARFusion TCGA_RNA-Seq ACAD9-RAB7A ACAD9 chr3 128603589 + RAB7A chr3 128532170 + Exonic hg19 BRCA TCGA-B6-A0X1-01A 3 1 Out-of-frame Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 19404 ChimerSeq STARFusion TCGA_RNA-Seq SMC5-TJP2 SMC5 chr9 72915116 + TJP2 chr9 71827464 + Exonic hg19 BRCA TCGA-B6-A0X1-01A 2 4 In-Frame Intra-chr q21.12 q21.11 Seq+ 19405 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC1-MAP4 SMARCC1 chr3 47702784 - MAP4 chr3 47919013 - Exonic hg19 BRCA TCGA-B6-A0X1-01A 2 3 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 19406 ChimerSeq STARFusion TCGA_RNA-Seq ACSL4-AMMECR1 ACSL4 chrX 108976368 - AMMECR1 chrX 109670031 - Exonic hg19 BRCA TCGA-B6-A0X1-01A 2 2 5'UTR-5'UTR Intra-chr q23 q23 Seq+ 19407 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC10-FSTL4 ZCCHC10 chr5 132362189 - FSTL4 chr5 132736678 - Exonic hg19 BRCA TCGA-B6-A0X1-01A 2 0 Out-of-frame Intra-chr q31.1 q31.1 19408 ChimerSeq STARFusion TCGA_RNA-Seq SLC12A8-BFSP2 SLC12A8 chr3 124930143 - BFSP2 chr3 133169147 + Exonic hg19 BRCA TCGA-D8-A1XR-01A 34 134 In-Frame Intra-chr q21.2 q22.1 Seq+ 19409 ChimerSeq STARFusion TCGA_RNA-Seq ABCB8-NOS3 ABCB8 chr7 150725697 + NOS3 chr7 150706018 + Exonic hg19 BRCA TCGA-AC-A3TN-01A 5 39 Out-of-frame Intra-chr q36.1 q36.1 Seq+ 19410 ChimerSeq STARFusion TCGA_RNA-Seq GIGYF2-EFHD1 GIGYF2 chr2 233613792 + EFHD1 chr2 233537019 + Exonic hg19 BRCA TCGA-B6-A0IJ-01A 129 294 In-Frame Intra-chr q37.1 q37.1 Seq+ 19411 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-NFYC MYH9 chr22 36783852 - NFYC chr1 41204508 + Exonic hg19 BRCA TCGA-B6-A0IJ-01A 109 301 5'UTR-5'UTR Inter-chr q12.3 Oncogene Tumor suppressor gene p34.2 Transcription factor Seq+ 19412 ChimerSeq STARFusion TCGA_RNA-Seq SCYL1-MALAT1 SCYL1 chr11 65293165 + MALAT1 chr11 65269783 + Exonic hg19 BRCA TCGA-B6-A0IJ-01A 26 66 Out-of-frame Intra-chr q13.1 Other:SCY1 Tumor suppressor gene q13.1 19413 ChimerSeq STARFusion TCGA_RNA-Seq GGA1-TRIOBP GGA1 chr22 38004910 + TRIOBP chr22 38161677 + Exonic hg19 BRCA TCGA-B6-A0IJ-01A 32 39 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 19414 ChimerSeq STARFusion TCGA_RNA-Seq PICK1-POLR2F PICK1 chr22 38453857 + POLR2F chr22 38352780 + Exonic hg19 BRCA TCGA-B6-A0IJ-01A 16 40 In-Frame Intra-chr q13.1 q13.1 Seq+ 19415 ChimerSeq STARFusion TCGA_RNA-Seq TRIB1-NSMCE2 TRIB1 chr8 126443504 + NSMCE2 chr8 126369461 + Exonic hg19 BRCA TCGA-B6-A0IJ-01A 11 22 Out-of-frame Intra-chr q24.13 q24.13 Seq+ 19416 ChimerSeq STARFusion TCGA_RNA-Seq MTA1-PACS2 MTA1 chr14 105886400 + PACS2 chr14 105814830 + Exonic hg19 BRCA TCGA-B6-A0IJ-01A 10 12 Out-of-frame Intra-chr q32.33 q32.33 Seq+ 19417 ChimerSeq STARFusion TCGA_RNA-Seq MIR1204-PVT1 MIR1204 chr8 128808254 + PVT1 chr8 128951754 + Exonic hg19 BRCA TCGA-B6-A0IJ-01A 4 30 5'UTR-5'UTR Intra-chr q24.21 q24.21 19418 ChimerSeq STARFusion TCGA_RNA-Seq ZNF148-FHAD1 ZNF148 chr3 125006947 - FHAD1 chr1 15689138 + Exonic hg19 BRCA TCGA-B6-A0IJ-01A 4 12 Out-of-frame Inter-chr q21.2 Transcription factor p36.21 Seq+ 19419 ChimerSeq STARFusion TCGA_RNA-Seq GLIPR2-RECK GLIPR2 chr9 36150946 + RECK chr9 36112302 + Exonic hg19 BRCA TCGA-B6-A0IJ-01A 2 16 In-Frame Intra-chr p13.3 p13.3 Tumor suppressor gene Seq+ 19420 ChimerSeq STARFusion TCGA_RNA-Seq GLIPR2-RECK GLIPR2 chr9 36150946 + RECK chr9 36116982 + Exonic hg19 BRCA TCGA-B6-A0IJ-01A 2 16 Out-of-frame Intra-chr p13.3 p13.3 Tumor suppressor gene Seq+ 19421 ChimerSeq STARFusion TCGA_RNA-Seq TAB3-DMD TAB3 chrX 30877604 - DMD chrX 31241238 - Exonic hg19 BRCA TCGA-B6-A0IJ-01A 3 12 Out-of-frame Intra-chr p21.2 p21.1 Tumor suppressor gene Seq+ 19422 ChimerSeq STARFusion TCGA_RNA-Seq ZNF148-FHAD1 ZNF148 chr3 125006947 - FHAD1 chr1 15692323 + Exonic hg19 BRCA TCGA-B6-A0IJ-01A 2 12 Out-of-frame Inter-chr q21.2 Transcription factor p36.21 Seq+ 19423 ChimerSeq STARFusion TCGA_RNA-Seq LTN1-RWDD2B LTN1 chr21 30365085 - RWDD2B chr21 30380942 - Exonic hg19 BRCA TCGA-B6-A0IJ-01A 2 8 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 19424 ChimerSeq STARFusion TCGA_RNA-Seq MGAT3-WWC1 MGAT3 chr22 39853562 + WWC1 chr5 167855038 + Exonic hg19 BRCA TCGA-B6-A0IJ-01A 3 1 5'UTR-CDS Inter-chr q13.1 q34 Seq+ 19425 ChimerSeq STARFusion TCGA_RNA-Seq LYST-FLJ40852 LYST chr1 236030143 - FLJ40852 chr7 141405557 - Exonic hg19 BRCA TCGA-B6-A0IJ-01A 2 1 5'UTR-3'UTR Inter-chr q42.3 19426 ChimerSeq STARFusion TCGA_RNA-Seq POLR1B-CNOT2 POLR1B chr2 113322076 + CNOT2 chr12 70704675 + Exonic hg19 BRCA TCGA-B6-A0IJ-01A 2 0 In-Frame Inter-chr q14.1 q15 19427 ChimerSeq STARFusion TCGA_RNA-Seq CALD1-LRGUK CALD1 chr7 134464500 + LRGUK chr7 133932308 + Exonic hg19 BRCA TCGA-E9-A244-01A 164 969 5'UTR-CDS Intra-chr q33 q33 Seq+ 19428 ChimerSeq STARFusion TCGA_RNA-Seq CALD1-LRGUK CALD1 chr7 134464500 + LRGUK chr7 133933703 + Exonic hg19 BRCA TCGA-E9-A244-01A 153 962 5'UTR-CDS Intra-chr q33 q33 Seq+ 19429 ChimerSeq STARFusion TCGA_RNA-Seq VTCN1-NUP88 VTCN1 chr1 117695713 - NUP88 chr17 5292280 - Exonic hg19 BRCA TCGA-E9-A244-01A 73 287 Out-of-frame Inter-chr p12 p13.2 Seq+ 19430 ChimerSeq STARFusion TCGA_RNA-Seq CTNND1-DDAH2 CTNND1 chr11 57529518 + DDAH2 chr6 31696522 - Exonic hg19 BRCA TCGA-E9-A244-01A 31 104 5'UTR-CDS Inter-chr q12.1 Tumor suppressor gene Seq+ 19431 ChimerSeq STARFusion TCGA_RNA-Seq RNF168-SMCO1 RNF168 chr3 196229744 - SMCO1 chr3 196235202 - Exonic hg19 BRCA TCGA-E9-A244-01A 32 59 Out-of-frame Intra-chr q29 q29 Seq+ 19432 ChimerSeq STARFusion TCGA_RNA-Seq CTNND1-DDAH2 CTNND1 chr11 57529518 + DDAH2 chr6 31697002 - Exonic hg19 BRCA TCGA-E9-A244-01A 9 104 5'UTR-5'UTR Inter-chr q12.1 Tumor suppressor gene Seq+ 19433 ChimerSeq STARFusion TCGA_RNA-Seq CTNND1-DDAH2 CTNND1 chr11 57529591 + DDAH2 chr6 31696522 - Exonic hg19 BRCA TCGA-E9-A244-01A 5 104 5'UTR-CDS Inter-chr q12.1 Tumor suppressor gene Seq+ 19434 ChimerSeq STARFusion TCGA_RNA-Seq VGLL1-CD40LG VGLL1 chrX 135632980 + CD40LG chrX 135741198 + Exonic hg19 BRCA TCGA-E9-A244-01A 18 41 In-Frame Intra-chr q26.3 q26.3 Seq+ 19435 ChimerSeq STARFusion TCGA_RNA-Seq SAMD8-C10orf11 SAMD8 chr10 76910864 + C10orf11 chr10 77795766 + Exonic hg19 BRCA TCGA-E9-A244-01A 7 20 In-Frame Intra-chr q22.2 Seq+ 19436 ChimerSeq STARFusion TCGA_RNA-Seq CSDE1-DENND2C CSDE1 chr1 115292442 - DENND2C chr1 115168809 - Exonic hg19 BRCA TCGA-E9-A244-01A 8 8 5'UTR-5'UTR Intra-chr p13.2 p13.2 Seq+ 19437 ChimerSeq STARFusion TCGA_RNA-Seq DENND4C-NFIL3 DENND4C chr9 19230831 + NFIL3 chr9 94173188 - Exonic hg19 BRCA TCGA-E9-A244-01A 5 13 5'UTR-5'UTR Intra-chr p22.1 q22.31 Transcription factor Seq+ 19438 ChimerSeq STARFusion TCGA_RNA-Seq MTMR2-MAML2 MTMR2 chr11 95598765 - MAML2 chr11 95724887 - Exonic hg19 BRCA TCGA-E9-A244-01A 2 16 Out-of-frame Intra-chr q21 q21 Oncogene Seq+ 19439 ChimerSeq STARFusion TCGA_RNA-Seq GABRP-KCNIP1 GABRP chr5 170216251 + KCNIP1 chr5 170147325 + Exonic hg19 BRCA TCGA-E9-A244-01A 3 11 Out-of-frame Intra-chr q35.1 q35.1 Seq+ 19440 ChimerSeq STARFusion TCGA_RNA-Seq TRAF3-RCOR1 TRAF3 chr14 103342862 + RCOR1 chr14 103173688 + Exonic hg19 BRCA TCGA-E9-A244-01A 3 6 In-Frame Intra-chr q32.32 q32.31 Seq+ 19441 ChimerSeq STARFusion TCGA_RNA-Seq MYO1E-ANXA2 MYO1E chr15 59453272 - ANXA2 chr15 60656722 - Exonic hg19 BRCA TCGA-E9-A244-01A 2 9 In-Frame Intra-chr q22.2 q22.2 19442 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN15-SAMD8 TSPAN15 chr10 71211446 + SAMD8 chr10 76924403 + Exonic hg19 BRCA TCGA-E9-A244-01A 2 9 Out-of-frame Intra-chr q22.1 q22.2 Seq+ 19443 ChimerSeq STARFusion TCGA_RNA-Seq UGCG-UBXN11 UGCG chr9 114677026 + UBXN11 chr1 26633195 - Exonic hg19 BRCA TCGA-E2-A1LA-01A 4 16 CDS-5'UTR Inter-chr q31.3 p36.11 Seq+ 19444 ChimerSeq STARFusion TCGA_RNA-Seq UGCG-UBXN11 UGCG chr9 114659593 + UBXN11 chr1 26633195 - Exonic hg19 BRCA TCGA-E2-A1LA-01A 2 16 CDS-5'UTR Inter-chr q31.3 p36.11 Seq+ 19445 ChimerSeq STARFusion TCGA_RNA-Seq SMAD3-SENP8 SMAD3 chr15 67358698 + SENP8 chr15 72431918 + Exonic hg19 BRCA TCGA-E2-A1LA-01A 4 7 CDS-5'UTR Intra-chr q22.33 Transcription factor q23 Seq+ 19446 ChimerSeq STARFusion TCGA_RNA-Seq NRCAM-PRIM2 NRCAM chr7 107830089 - PRIM2 chr6 57512472 + Exonic hg19 BRCA TCGA-A8-A06R-01A 20 123 Out-of-frame Inter-chr q31.1 Tumor suppressor gene p11.2 Seq+ 19447 ChimerSeq STARFusion TCGA_RNA-Seq DYNC1H1-PPP2R5C DYNC1H1 chr14 102478807 + PPP2R5C chr14 102378738 + Exonic hg19 BRCA TCGA-A8-A06R-01A 20 36 Out-of-frame Intra-chr q32.31 q32.31 Tumor suppressor gene Seq+ 19448 ChimerSeq STARFusion TCGA_RNA-Seq NAV1-MROH3P NAV1 chr1 201709204 + MROH3P chr1 200934159 + Exonic hg19 BRCA TCGA-A8-A06R-01A 4 14 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 19449 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-NUBP1 CREBBP chr16 3819175 - NUBP1 chr16 10846467 + Exonic hg19 BRCA TCGA-B6-A0IA-01A 57 209 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.13 Seq+ 19450 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-NUBP1 CREBBP chr16 3819175 - NUBP1 chr16 10849578 + Exonic hg19 BRCA TCGA-B6-A0IA-01A 11 209 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.13 Seq+ 19451 ChimerSeq STARFusion TCGA_RNA-Seq CHD2-LOC100507217 CHD2 chr15 93444529 + LOC100507217 chr15 93435234 + Exonic hg19 BRCA TCGA-B6-A0IA-01A 4 10 CDS-5'UTR Intra-chr q26.1 19452 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC1-SPAG6 DNAJC1 chr10 22094909 - SPAG6 chr10 22690090 + Exonic hg19 BRCA TCGA-B6-A0IA-01A 2 1 In-Frame Intra-chr p12.31 p12.2 19453 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC1-FBXL5 DNAJC1 chr10 22171211 - FBXL5 chr4 15607422 - Exonic hg19 BRCA TCGA-B6-A0IA-01A 2 0 Out-of-frame Inter-chr p12.31 p15.32 Seq+ 19454 ChimerSeq STARFusion TCGA_RNA-Seq AUTS2-RNA45S5 AUTS2 chr7 69064616 + RNA45S5 chrUn_gl000220 117768 + Exonic hg19 BRCA TCGA-C8-A12X-01A 3 1 Out-of-frame Inter-chr q11.22 19455 ChimerSeq STARFusion TCGA_RNA-Seq ABLIM3-AZU1 ABLIM3 chr5 148627492 + AZU1 chr19 828230 + Exonic hg19 BRCA TCGA-C8-A12X-01A 2 0 In-Frame Inter-chr q32 p13.3 19456 ChimerSeq STARFusion TCGA_RNA-Seq TOMM20-LOC493754 TOMM20 chr1 235291913 - LOC493754 chr7 66019143 - Exonic hg19 BRCA TCGA-AR-A0TR-01A 3 1 Out-of-frame Inter-chr q42.3 19457 ChimerSeq STARFusion TCGA_RNA-Seq PBRM1-IGKC PBRM1 chr3 52719596 - IGKC chr2 89160118 - Exonic hg19 BRCA TCGA-AR-A2LH-01A 4 1 Out-of-frame Inter-chr p21.1 Oncogene Tumor suppressor gene p11.2 19458 ChimerSeq STARFusion TCGA_RNA-Seq PIP5K1A-MLLT11 PIP5K1A chr1 151171557 + MLLT11 chr1 151039695 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 84 261 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 19459 ChimerSeq STARFusion TCGA_RNA-Seq AARS-COG4 AARS chr16 70316523 - COG4 chr16 70553634 - Exonic hg19 BRCA TCGA-BH-A0B9-01A 43 163 In-Frame Intra-chr q22.1 q22.1 Seq+ 19460 ChimerSeq STARFusion TCGA_RNA-Seq TFDP1-TMCO3 TFDP1 chr13 114277601 + TMCO3 chr13 114164553 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 30 181 In-Frame Intra-chr q34 Transcription factor q34 Seq+ 19461 ChimerSeq STARFusion TCGA_RNA-Seq AMMECR1L-SAP130 AMMECR1L chr2 128641777 - SAP130 chr2 128712918 - Exonic hg19 BRCA TCGA-BH-A0B9-01A 50 97 5'UTR-CDS Intra-chr q14.3 q14.3 Seq+ 19462 ChimerSeq STARFusion TCGA_RNA-Seq YARS-ADM5 YARS chr1 33246649 - ADM5 chr19 50193147 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 14 217 Out-of-frame Inter-chr p35.1 q13.33 Seq+ 19463 ChimerSeq STARFusion TCGA_RNA-Seq YARS-ADM5 YARS chr1 33246640 - ADM5 chr19 50192779 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 9 217 Out-of-frame Inter-chr p35.1 q13.33 Seq+ 19464 ChimerSeq STARFusion TCGA_RNA-Seq YARS-ADM5 YARS chr1 33246649 - ADM5 chr19 50192945 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 6 217 Out-of-frame Inter-chr p35.1 q13.33 Seq+ 19465 ChimerSeq STARFusion TCGA_RNA-Seq YARS-ADM5 YARS chr1 33246649 - ADM5 chr19 50193363 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 2 217 Out-of-frame Inter-chr p35.1 q13.33 Seq+ 19466 ChimerSeq STARFusion TCGA_RNA-Seq CDV3-TMEM108 CDV3 chr3 133293959 + TMEM108 chr3 133098596 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 24 122 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 19467 ChimerSeq STARFusion TCGA_RNA-Seq AARS-ST3GAL2 AARS chr16 70303521 - ST3GAL2 chr16 70415765 - Exonic hg19 BRCA TCGA-BH-A0B9-01A 23 91 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 19468 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-CAPZB ACTN4 chr19 39207956 + CAPZB chr1 19712120 - Exonic hg19 BRCA TCGA-BH-A0B9-01A 12 116 In-Frame Inter-chr p36.13 Seq+ 19469 ChimerSeq STARFusion TCGA_RNA-Seq RANBP17-KCNIP1 RANBP17 chr5 170351554 + KCNIP1 chr5 170145762 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 10 104 In-Frame Intra-chr q35.1 q35.1 Seq+ 19470 ChimerSeq STARFusion TCGA_RNA-Seq PI4K2A-ZDHHC16 PI4K2A chr10 99433492 + ZDHHC16 chr10 99213375 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 16 55 Out-of-frame Intra-chr q24.2 q24.1 Seq+ 19471 ChimerSeq STARFusion TCGA_RNA-Seq EVA1C-MRAP EVA1C chr21 33867480 + MRAP chr21 33683995 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 16 34 Out-of-frame Intra-chr q22.11 q22.11 Seq+ 19472 ChimerSeq STARFusion TCGA_RNA-Seq PYGB-ENTPD6 PYGB chr20 25277085 + ENTPD6 chr20 25193899 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 8 34 Out-of-frame Intra-chr p11.21 p11.21 Seq+ 19473 ChimerSeq STARFusion TCGA_RNA-Seq STUB1-RAB11FIP3 STUB1 chr16 732682 + RAB11FIP3 chr16 555524 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 7 38 3'UTR-CDS Intra-chr p13.3 Tumor suppressor gene Seq+ 19474 ChimerSeq STARFusion TCGA_RNA-Seq EEF2K-UQCRC2 EEF2K chr16 22276201 + UQCRC2 chr16 21982846 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 7 34 Out-of-frame Intra-chr p12.2 Seq+ 19475 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L4B-PTPN3 EPB41L4B chr9 112030671 - PTPN3 chr9 112172695 - Exonic hg19 BRCA TCGA-BH-A0B9-01A 11 18 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 19476 ChimerSeq STARFusion TCGA_RNA-Seq ARFGAP2-CELF1 ARFGAP2 chr11 47198067 - CELF1 chr11 47508793 - Exonic hg19 BRCA TCGA-BH-A0B9-01A 9 21 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 19477 ChimerSeq STARFusion TCGA_RNA-Seq C11orf84-RTN3 C11orf84 chr11 63586474 + RTN3 chr11 63517463 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 5 23 In-Frame Intra-chr q13.1 q13.1 Seq+ 19478 ChimerSeq STARFusion TCGA_RNA-Seq ZNF607-CAPN12 ZNF607 chr19 38198815 - CAPN12 chr19 39233168 - Exonic hg19 BRCA TCGA-BH-A0B9-01A 3 31 In-Frame Intra-chr q13.12 Transcription factor q13.2 Seq+ 19479 ChimerSeq STARFusion TCGA_RNA-Seq RBM38-SPO11 RBM38 chr20 55968389 + SPO11 chr20 55917785 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 7 12 In-Frame Intra-chr q13.31 Tumor suppressor gene q13.31 Seq+ 19480 ChimerSeq STARFusion TCGA_RNA-Seq HDAC1-KPNA6 HDAC1 chr1 32790154 + KPNA6 chr1 32620189 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 4 22 In-Frame Intra-chr p35.2 Tumor suppressor gene p35.2 Seq+ 19481 ChimerSeq STARFusion TCGA_RNA-Seq RFTN1-DAZL RFTN1 chr3 16368280 - DAZL chr3 16646818 - Exonic hg19 BRCA TCGA-BH-A0B9-01A 3 26 CDS-5'UTR Intra-chr p24.3 p24.3 Seq+ 19482 ChimerSeq STARFusion TCGA_RNA-Seq LINC00340-CDKAL1 LINC00340 chr6 22111149 + CDKAL1 chr6 21201341 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 4 19 5'UTR-CDS Intra-chr p22.3 19483 ChimerSeq STARFusion TCGA_RNA-Seq GOLGA4-MLH1 GOLGA4 chr3 37370584 + MLH1 chr3 37089010 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 6 9 In-Frame Intra-chr p22.2 p22.2 Oncogene Tumor suppressor gene Seq+ 19484 ChimerSeq STARFusion TCGA_RNA-Seq KDM4B-UHRF1 KDM4B chr19 4969241 + UHRF1 chr19 4941540 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 4 10 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 19485 ChimerSeq STARFusion TCGA_RNA-Seq CNNM2-SUFU CNNM2 chr10 104679858 + SUFU chr10 104375025 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 3 13 Out-of-frame Intra-chr q24.32 q24.32 Oncogene Tumor suppressor gene Seq+ 19486 ChimerSeq STARFusion TCGA_RNA-Seq RALY-CBFA2T2 RALY chr20 32660136 + CBFA2T2 chr20 32207323 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 2 15 Out-of-frame Intra-chr q11.22 q11.21 19487 ChimerSeq STARFusion TCGA_RNA-Seq NUP93-MT1DP NUP93 chr16 56764123 + MT1DP chr16 56678023 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 3 8 5'UTR-5'UTR Intra-chr q13 q13 Tumor suppressor gene 19488 ChimerSeq STARFusion TCGA_RNA-Seq EHF-CAT EHF chr11 34668231 + CAT chr11 34485652 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 2 10 In-Frame Intra-chr p13 Tumor suppressor gene Transcription factor p13 Tumor suppressor gene Seq+ 19489 ChimerSeq STARFusion TCGA_RNA-Seq RBM38-RAE1 RBM38 chr20 55968389 + RAE1 chr20 55929088 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 3 4 CDS-5'UTR Intra-chr q13.31 Tumor suppressor gene q13.31 Seq+ 19490 ChimerSeq STARFusion TCGA_RNA-Seq CLPB-STARD10 CLPB chr11 72091325 - STARD10 chr11 72492339 - Exonic hg19 BRCA TCGA-BH-A0B9-01A 2 7 CDS-5'UTR Intra-chr q13.4 q13.4 Seq+ 19491 ChimerSeq STARFusion TCGA_RNA-Seq ATN1-LRRC23 ATN1 chr12 7037547 + LRRC23 chr12 7014749 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 2 2 5'UTR-5'UTR Intra-chr p13.31 p13.31 Seq+ 19492 ChimerSeq STARFusion TCGA_RNA-Seq MYO6-SENP6 MYO6 chr6 76459140 + SENP6 chr6 76419243 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 2 2 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 19493 ChimerSeq STARFusion TCGA_RNA-Seq OXSR1-CTDSPL OXSR1 chr3 38240354 + CTDSPL chr3 38006062 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 2 2 Out-of-frame Intra-chr p22.2 p22.2 Tumor suppressor gene Seq+ 19494 ChimerSeq STARFusion TCGA_RNA-Seq USP13-NDUFB5 USP13 chr3 179408089 + NDUFB5 chr3 179332759 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 2 2 In-Frame Intra-chr q26.33 q26.33 19495 ChimerSeq STARFusion TCGA_RNA-Seq PDHX-EHF PDHX chr11 34953031 + EHF chr11 34667986 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 2 1 In-Frame Intra-chr p13 p13 Tumor suppressor gene Transcription factor Seq+ 19496 ChimerSeq STARFusion TCGA_RNA-Seq PTPRU-EPB41 PTPRU chr1 29602268 + EPB41 chr1 29379616 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 2 0 In-Frame Intra-chr p35.3 p35.3 Tumor suppressor gene Seq+ 19497 ChimerSeq STARFusion TCGA_RNA-Seq SACM1L-LIMD1 SACM1L chr3 45730989 + LIMD1 chr3 45707142 + Exonic hg19 BRCA TCGA-AN-A0AT-01A 22 29 Out-of-frame Intra-chr p21.31 p21.31 Tumor suppressor gene Seq+ 19498 ChimerSeq STARFusion TCGA_RNA-Seq CD302-ALPL CD302 chr2 160634449 - ALPL chr1 21880471 + Exonic hg19 BRCA TCGA-AN-A0AT-01A 12 29 CDS-5'UTR Inter-chr q24.2 p36.12 Tumor suppressor gene Seq+ 19499 ChimerSeq STARFusion TCGA_RNA-Seq MCM5-HMOX1 MCM5 chr22 35804556 + HMOX1 chr22 35785857 + Exonic hg19 BRCA TCGA-AN-A0AT-01A 10 35 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 19500 ChimerSeq STARFusion TCGA_RNA-Seq MPDZ-NFIB MPDZ chr9 13279563 - NFIB chr9 14150264 - Exonic hg19 BRCA TCGA-AN-A0AT-01A 9 6 5'UTR-CDS Intra-chr p23 p22.3 Transcription factor Seq+ 19501 ChimerSeq STARFusion TCGA_RNA-Seq CNOT2-RAB3IP CNOT2 chr12 70704797 + RAB3IP chr12 70149164 + Exonic hg19 BRCA TCGA-AN-A0AT-01A 4 18 Out-of-frame Intra-chr q15 q15 Seq+ 19502 ChimerSeq STARFusion TCGA_RNA-Seq TRUB1-FAM160B1 TRUB1 chr10 116719566 + FAM160B1 chr10 116659253 + Exonic hg19 BRCA TCGA-AN-A0AT-01A 3 22 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 19503 ChimerSeq STARFusion TCGA_RNA-Seq CNOT2-RAB3IP CNOT2 chr12 70713144 + RAB3IP chr12 70149164 + Exonic hg19 BRCA TCGA-AN-A0AT-01A 3 18 Out-of-frame Intra-chr q15 q15 Seq+ 19504 ChimerSeq STARFusion TCGA_RNA-Seq CUEDC1-HSF5 CUEDC1 chr17 55962590 - HSF5 chr17 56536306 - Exonic hg19 BRCA TCGA-AN-A0AT-01A 3 1 In-Frame Intra-chr q22 q22 Transcription factor 19505 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-NVL RCC1 chr1 28834672 + NVL chr1 224455835 - Exonic hg19 BRCA TCGA-AN-A0AT-01A 2 2 5'UTR-CDS Intra-chr p35.3 q42.11 19506 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-NVL SNHG3 chr1 28834672 + NVL chr1 224455835 - Exonic hg19 BRCA TCGA-AN-A0AT-01A 2 2 5'UTR-CDS Intra-chr p35.3 q42.11 19507 ChimerSeq STARFusion TCGA_RNA-Seq CEP350-TUBB CEP350 chr1 180010937 + TUBB chr6_ssto_hap7 2022621 + Exonic hg19 BRCA TCGA-AN-A0AT-01A 2 0 CDS-5'UTR Inter-chr q25.2 19508 ChimerSeq STARFusion TCGA_RNA-Seq TOPBP1-NEK11 TOPBP1 chr3 133356720 - NEK11 chr3 131068401 + Exonic hg19 BRCA TCGA-A8-A06U-01A 53 81 Out-of-frame Intra-chr q22.1 q22.1 Other:NEK Seq+ 19509 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-CD96 ZBTB20 chr3 114819022 - CD96 chr3 111366390 + Exonic hg19 BRCA TCGA-A8-A06U-01A 17 111 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.13 Seq+ 19510 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-CD96 ZBTB20 chr3 114790066 - CD96 chr3 111366390 + Exonic hg19 BRCA TCGA-A8-A06U-01A 10 111 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.13 Seq+ 19511 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-CD96 ZBTB20 chr3 114866066 - CD96 chr3 111366390 + Exonic hg19 BRCA TCGA-A8-A06U-01A 8 111 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.13 Seq+ 19512 ChimerSeq STARFusion TCGA_RNA-Seq GTF2H1-HPS5 GTF2H1 chr11 18344287 + HPS5 chr11 18318531 - Exonic hg19 BRCA TCGA-A8-A06U-01A 11 43 5'UTR-CDS Intra-chr p15.1 p15.1 Seq+ 19513 ChimerSeq STARFusion TCGA_RNA-Seq CHD2-HOMER2 CHD2 chr15 93496803 + HOMER2 chr15 83533011 - Exonic hg19 BRCA TCGA-A8-A06U-01A 12 31 In-Frame Intra-chr q26.1 q25.2 Tumor suppressor gene Seq+ 19514 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V1A-OPA1 ATP6V1A chr3 113465960 + OPA1 chr3 193349401 + Exonic hg19 BRCA TCGA-A8-A06U-01A 7 46 5'UTR-CDS Intra-chr q13.31 q29 Seq+ 19515 ChimerSeq STARFusion TCGA_RNA-Seq MARK3-FRG1 MARK3 chr14 103894777 + FRG1 chr4 190878553 + Exonic hg19 BRCA TCGA-A8-A06U-01A 3 57 In-Frame Inter-chr q32.32 CAMK:CAMKL 19516 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V1A-OPA1 ATP6V1A chr3 113465960 + OPA1 chr3 193343881 + Exonic hg19 BRCA TCGA-A8-A06U-01A 4 43 5'UTR-CDS Intra-chr q13.31 q29 Seq+ 19517 ChimerSeq STARFusion TCGA_RNA-Seq HPS5-SETD5 HPS5 chr11 18318345 - SETD5 chr3 9466151 + Exonic hg19 BRCA TCGA-A8-A06U-01A 9 10 CDS-5'UTR Inter-chr p15.1 p25.3 Seq+ 19518 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-TUSC5 YWHAE chr17 1303341 - TUSC5 chr17 1198785 + Exonic hg19 BRCA TCGA-A8-A06U-01A 6 18 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 19519 ChimerSeq STARFusion TCGA_RNA-Seq LPP-ABHD17C LPP chr3 187943315 + ABHD17C chr15 81046492 + Exonic hg19 BRCA TCGA-A8-A06U-01A 5 19 Out-of-frame Inter-chr q27.3 Oncogene q25.1 Seq+ 19520 ChimerSeq STARFusion TCGA_RNA-Seq NUMA1-ADARB2 NUMA1 chr11 71734111 - ADARB2 chr10 1263059 - Exonic hg19 BRCA TCGA-A8-A06U-01A 5 17 Out-of-frame Inter-chr q13.4 Oncogene p15.3 Seq+ 19521 ChimerSeq STARFusion TCGA_RNA-Seq DZIP3-HMGN2P25 DZIP3 chr3 108381104 + HMGN2P25 chr3 141584231 - Exonic hg19 BRCA TCGA-A8-A06U-01A 5 14 Out-of-frame Intra-chr q13.13 q23 19522 ChimerSeq STARFusion TCGA_RNA-Seq MFSD6-CXorf66 MFSD6 chr2 191302287 + CXorf66 chrX 139040376 - Exonic hg19 BRCA TCGA-A8-A06U-01A 6 9 Out-of-frame Inter-chr q32.2 q27.1 Seq+ 19523 ChimerSeq STARFusion TCGA_RNA-Seq SSR3-TRPC1 SSR3 chr3 156272746 - TRPC1 chr3 142521011 + Exonic hg19 BRCA TCGA-A8-A06U-01A 3 18 Out-of-frame Intra-chr q25.31 q23 Seq+ 19524 ChimerSeq STARFusion TCGA_RNA-Seq CUL5-SHANK2 CUL5 chr11 107925682 + SHANK2 chr11 70830078 - Exonic hg19 BRCA TCGA-A8-A06U-01A 5 7 Out-of-frame Intra-chr q22.3 Tumor suppressor gene q13.4 Seq+ 19525 ChimerSeq STARFusion TCGA_RNA-Seq ADAM20P2-PES1P1 ADAM20P2 chr4 176497309 + PES1P1 chr4 135248413 + Exonic hg19 BRCA TCGA-A8-A06U-01A 3 13 Out-of-frame Intra-chr q34.2 q28.3 19526 ChimerSeq STARFusion TCGA_RNA-Seq KMT2C-RHEB KMT2C chr7 151882643 - RHEB chr7 151188100 - Exonic hg19 BRCA TCGA-A8-A06U-01A 3 10 Out-of-frame Intra-chr q36.1 Oncogene Tumor suppressor gene q36.1 Oncogene Seq+ 19527 ChimerSeq STARFusion TCGA_RNA-Seq PODXL-ZNF467 PODXL chr7 131188743 - ZNF467 chr7 149461767 - Exonic hg19 BRCA TCGA-A8-A06U-01A 4 6 Out-of-frame Intra-chr q32.3 q36.1 Transcription factor Seq+ 19528 ChimerSeq STARFusion TCGA_RNA-Seq NUP98-TMEM117 NUP98 chr11 3774546 - TMEM117 chr12 44770378 + Exonic hg19 BRCA TCGA-A8-A06U-01A 2 8 Out-of-frame Inter-chr p15.4 Oncogene Tumor suppressor gene q12 Seq+ 19529 ChimerSeq STARFusion TCGA_RNA-Seq MAFIP-TEKT4 MAFIP chr4_gl000194_random 112792 - TEKT4 chr2 95540521 + Exonic hg19 BRCA TCGA-E9-A24A-01A 9 11 Out-of-frame Inter-chr q11.1 19530 ChimerSeq STARFusion TCGA_RNA-Seq UBE2E1-INTS10 UBE2E1 chr3 23929190 + INTS10 chr8 19687917 + Exonic hg19 BRCA TCGA-AO-A0J7-01A 2 1 In-Frame Inter-chr p24.2 p21.3 Seq+ 19531 ChimerSeq STARFusion TCGA_RNA-Seq PBXIP1-ACBD6 PBXIP1 chr1 154928545 - ACBD6 chr1 180283857 - Exonic hg19 BRCA TCGA-BH-A8FY-01A 10 13 5'UTR-CDS Intra-chr q21.3 q25.3 Seq+ 19532 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF11-ALDH9A1 ARHGEF11 chr1 157014091 - ALDH9A1 chr1 165664634 - Exonic hg19 BRCA TCGA-BH-A8FY-01A 5 13 Out-of-frame Intra-chr q23.1 q24.1 Seq+ 19533 ChimerSeq STARFusion TCGA_RNA-Seq NOS1AP-DCAF6 NOS1AP chr1 162124266 + DCAF6 chr1 168012263 + Exonic hg19 BRCA TCGA-BH-A8FY-01A 3 13 Out-of-frame Intra-chr q23.3 q24.2 Seq+ 19534 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-TIAM2 ANKHD1 chr5 139828890 + TIAM2 chr6 155565145 + Exonic hg19 BRCA TCGA-A2-A0CK-01A 2 11 In-Frame Inter-chr q31.3 q25.2 Seq+ 19535 ChimerSeq STARFusion TCGA_RNA-Seq PGAP3-STAC2 PGAP3 chr17 37844087 - STAC2 chr17 37373426 - Exonic hg19 BRCA TCGA-A8-A08X-01A 75 302 In-Frame Intra-chr q12 Oncogene q12 Seq+ 19536 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAP1-VAV2 MAPKAP1 chr9 128419930 - VAV2 chr9 136726554 - Exonic hg19 BRCA TCGA-A8-A08X-01A 69 274 In-Frame Intra-chr q33.3 q34.2 Seq+ 19537 ChimerSeq STARFusion TCGA_RNA-Seq FAM129B-OLFM1 FAM129B chr9 130331099 - OLFM1 chr9 137982041 + Exonic hg19 BRCA TCGA-A8-A08X-01A 67 112 Out-of-frame Intra-chr q34.11 q34.3 Seq+ 19538 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-PTBP3 IGH@ chr14 106725200 - PTBP3 chr9 114982105 - Exonic hg19 BRCA TCGA-A8-A08X-01A 65 1 Out-of-frame Inter-chr 32.33 q32 19539 ChimerSeq STARFusion TCGA_RNA-Seq SLFN11-MIEN1 SLFN11 chr17 33700493 - MIEN1 chr17 37886544 - Exonic hg19 BRCA TCGA-A8-A08X-01A 20 126 5'UTR-CDS Intra-chr q12 q12 Seq+ 19540 ChimerSeq STARFusion TCGA_RNA-Seq SLFN11-MIEN1 SLFN11 chr17 33700601 - MIEN1 chr17 37886544 - Exonic hg19 BRCA TCGA-A8-A08X-01A 2 126 5'UTR-CDS Intra-chr q12 q12 Seq+ 19541 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-IFNAR1 IGH@ chr14 106877620 - IFNAR1 chr21 34721523 + Exonic hg19 BRCA TCGA-A8-A08X-01A 22 1 Out-of-frame Inter-chr 32.33 q22.11 19542 ChimerSeq STARFusion TCGA_RNA-Seq FAM129B-SEC16A FAM129B chr9 130331099 - SEC16A chr9 139342613 - Exonic hg19 BRCA TCGA-A8-A08X-01A 12 32 Out-of-frame Intra-chr q34.11 q34.3 Seq+ 19543 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-COL1A1 IGH@ chr14 106208230 - COL1A1 chr17 48264067 - Exonic hg19 BRCA TCGA-A8-A08X-01A 3 65 Out-of-frame Inter-chr 32.33 q21.33 Oncogene 19544 ChimerSeq STARFusion TCGA_RNA-Seq HCFC1-IGHG2 HCFC1 chrX 153222119 - IGHG2 chr14 106111127 - Exonic hg19 BRCA TCGA-A8-A08X-01A 19 0 Out-of-frame Inter-chr q28 19545 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-COL1A1 IGHG1 chr14 106208230 - COL1A1 chr17 48264067 - Exonic hg19 BRCA TCGA-A8-A08X-01A 3 42 Out-of-frame Inter-chr q32.33 q21.33 Oncogene 19546 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAP1-PRRC2B MAPKAP1 chr9 128419930 - PRRC2B chr9 134305477 + Exonic hg19 BRCA TCGA-A8-A08X-01A 8 20 5'UTR-5'UTR Intra-chr q33.3 q34.13 Seq+ 19547 ChimerSeq STARFusion TCGA_RNA-Seq NACC2-NUP214 NACC2 chr9 138941482 - NUP214 chr9 134108841 + Exonic hg19 BRCA TCGA-A8-A08X-01A 9 13 Out-of-frame Intra-chr q34.3 Transcription factor q34.13 Oncogene Seq+ 19548 ChimerSeq STARFusion TCGA_RNA-Seq FAM129B-SEC16A FAM129B chr9 130323427 - SEC16A chr9 139342613 - Exonic hg19 BRCA TCGA-A8-A08X-01A 3 32 Out-of-frame Intra-chr q34.11 q34.3 Seq+ 19549 ChimerSeq STARFusion TCGA_RNA-Seq AP2B1-ERBB2 AP2B1 chr17 33968994 + ERBB2 chr17 37844949 + Exonic hg19 BRCA TCGA-A8-A08X-01A 5 11 CDS-5'UTR Intra-chr q12 q12 Oncogene Seq+ 19550 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-LXN TBL1XR1 chr3 176750759 - LXN chr3 158388808 - Exonic hg19 BRCA TCGA-A8-A08X-01A 3 15 In-Frame Intra-chr q26.32 q25.32 Tumor suppressor gene Seq+ 19551 ChimerSeq STARFusion TCGA_RNA-Seq AP2B1-ERBB2 AP2B1 chr17 33968994 + ERBB2 chr17 37849514 + Exonic hg19 BRCA TCGA-A8-A08X-01A 2 11 CDS-5'UTR Intra-chr q12 q12 Oncogene Seq+ 19552 ChimerSeq STARFusion TCGA_RNA-Seq CDK12-ERBB2 CDK12 chr17 37657692 + ERBB2 chr17 37851241 + Exonic hg19 BRCA TCGA-A8-A08X-01A 3 5 CDS-5'UTR Intra-chr q12 Oncogene q12 Oncogene Seq+ 19553 ChimerSeq STARFusion TCGA_RNA-Seq NEMF-SOS2 NEMF chr14 50300141 - SOS2 chr14 50587102 - Exonic hg19 BRCA TCGA-C8-A27B-01A 4 43 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 19554 ChimerSeq STARFusion TCGA_RNA-Seq AKAP8L-BRD4 AKAP8L chr19 15529722 - BRD4 chr19 15383944 - Exonic hg19 BRCA TCGA-C8-A27B-01A 4 24 CDS-5'UTR Intra-chr p13.12 Transcription factor p13.12 Atypical:BRD Seq+ 19555 ChimerSeq STARFusion TCGA_RNA-Seq GOLM1-ZCCHC6 GOLM1 chr9 88692327 - ZCCHC6 chr9 88920154 - Exonic hg19 BRCA TCGA-C8-A27B-01A 2 18 Out-of-frame Intra-chr q21.33 q21.33 Seq+ 19556 ChimerSeq STARFusion TCGA_RNA-Seq SHANK2-PATL1 SHANK2 chr11 70858166 - PATL1 chr11 59434437 - Exonic hg19 BRCA TCGA-C8-A27B-01A 4 7 In-Frame Intra-chr q13.4 q12.1 Seq+ 19557 ChimerSeq STARFusion TCGA_RNA-Seq NAA20-ATP8B4 NAA20 chr20 20013297 + ATP8B4 chr15 50273491 - Exonic hg19 BRCA TCGA-C8-A27B-01A 4 6 In-Frame Inter-chr p11.23 q21.2 Seq+ 19558 ChimerSeq STARFusion TCGA_RNA-Seq CHD2-LOC100507217 CHD2 chr15 93444529 + LOC100507217 chr15 93428745 + Exonic hg19 BRCA TCGA-C8-A27B-01A 2 2 CDS-5'UTR Intra-chr q26.1 19559 ChimerSeq STARFusion TCGA_RNA-Seq C19orf21-C2orf42 C19orf21 chr19 751171 + C2orf42 chr2 70392767 - Exonic hg19 BRCA TCGA-E9-A1NI-01A 6 4 5'UTR-CDS Inter-chr p13.3 19560 ChimerSeq STARFusion TCGA_RNA-Seq PPP2CA-CDKL3 PPP2CA chr5 133561451 - CDKL3 chr5 133642393 - Exonic hg19 BRCA TCGA-AO-A0JD-01A 33 162 Out-of-frame Intra-chr q31.1 Tumor suppressor gene q31.1 CMGC:CDKL Seq+ 19561 ChimerSeq STARFusion TCGA_RNA-Seq PPP2CA-CDKL3 PPP2CA chr5 133561451 - CDKL3 chr5 133640258 - Exonic hg19 BRCA TCGA-AO-A0JD-01A 15 162 In-Frame Intra-chr q31.1 Tumor suppressor gene q31.1 CMGC:CDKL Seq+ 19562 ChimerSeq STARFusion TCGA_RNA-Seq PPP2CA-CDKL3 PPP2CA chr5 133561451 - CDKL3 chr5 133644418 - Exonic hg19 BRCA TCGA-AO-A0JD-01A 9 162 Out-of-frame Intra-chr q31.1 Tumor suppressor gene q31.1 CMGC:CDKL Seq+ 19563 ChimerSeq STARFusion TCGA_RNA-Seq PPP2CA-CDKL3 PPP2CA chr5 133561451 - CDKL3 chr5 133644157 - Exonic hg19 BRCA TCGA-AO-A0JD-01A 5 162 In-Frame Intra-chr q31.1 Tumor suppressor gene q31.1 CMGC:CDKL Seq+ 19564 ChimerSeq STARFusion TCGA_RNA-Seq TMEM134-SPTBN2 TMEM134 chr11 67234783 - SPTBN2 chr11 66466553 - Exonic hg19 BRCA TCGA-AO-A0JD-01A 18 87 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 19565 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT1-NFX1 B4GALT1 chr9 33135187 - NFX1 chr9 33366627 + Exonic hg19 BRCA TCGA-AO-A0JD-01A 3 52 In-Frame Intra-chr p21.1 p13.3 Transcription factor Seq+ 19566 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-CNTN5 TMEM123 chr11 102272270 - CNTN5 chr11 99426876 + Exonic hg19 BRCA TCGA-AO-A0JD-01A 11 15 CDS-5'UTR Intra-chr q22.2 q22.1 Seq+ 19567 ChimerSeq STARFusion TCGA_RNA-Seq NDUFAF2-ANKRD31 NDUFAF2 chr5 60241209 + ANKRD31 chr5 74464946 - Exonic hg19 BRCA TCGA-AO-A0JD-01A 3 17 In-Frame Intra-chr q12.1 q13.3 Seq+ 19568 ChimerSeq STARFusion TCGA_RNA-Seq NDUFAF2-ANKRD31 NDUFAF2 chr5 60241209 + ANKRD31 chr5 74444453 - Exonic hg19 BRCA TCGA-AO-A0JD-01A 2 17 In-Frame Intra-chr q12.1 q13.3 Seq+ 19569 ChimerSeq STARFusion TCGA_RNA-Seq ZNF253-LINC00466 ZNF253 chr19 19976808 + LINC00466 chr1 63628353 - Exonic hg19 BRCA TCGA-AO-A0JD-01A 2 4 CDS-3'UTR Inter-chr p13.11 Transcription factor p31.3 Seq+ 19570 ChimerSeq STARFusion TCGA_RNA-Seq URM1-COQ4 URM1 chr9 131140385 + COQ4 chr9 131094432 + Exonic hg19 BRCA TCGA-AO-A0JD-01A 2 1 Out-of-frame Intra-chr q34.11 q34.11 19571 ChimerSeq STARFusion TCGA_RNA-Seq USP22-RN7SL2 USP22 chr17 20904265 - RN7SL2 chr14 50329537 - Exonic hg19 BRCA TCGA-A2-A0EY-01A 8 161 Out-of-frame Inter-chr p11.2 q21.3 19572 ChimerSeq STARFusion TCGA_RNA-Seq C19orf25-MED1 C19orf25 chr19 1478773 - MED1 chr17 37604157 - Exonic hg19 BRCA TCGA-A2-A0EY-01A 33 40 In-Frame Inter-chr p13.3 q12 Tumor suppressor gene Seq+ 19573 ChimerSeq STARFusion TCGA_RNA-Seq MED1-TMPRSS9 MED1 chr17 37607291 - TMPRSS9 chr19 2398793 + Exonic hg19 BRCA TCGA-A2-A0EY-01A 9 62 Out-of-frame Inter-chr q12 Tumor suppressor gene p13.3 Seq+ 19574 ChimerSeq STARFusion TCGA_RNA-Seq MED1-TMPRSS9 MED1 chr17 37607291 - TMPRSS9 chr19 2401973 + Exonic hg19 BRCA TCGA-A2-A0EY-01A 9 62 In-Frame Inter-chr q12 Tumor suppressor gene p13.3 Seq+ 19575 ChimerSeq STARFusion TCGA_RNA-Seq ESRP2-SLC7A6 ESRP2 chr16 68265081 - SLC7A6 chr16 68321649 + Exonic hg19 BRCA TCGA-A2-A0EY-01A 7 38 In-Frame Intra-chr q22.1 q22.1 Seq+ 19576 ChimerSeq STARFusion TCGA_RNA-Seq SMG1-ANO3 SMG1 chr16 18869492 - ANO3 chr11 26669256 + Exonic hg19 BRCA TCGA-A2-A0EY-01A 3 41 In-Frame Inter-chr p12.3 Atypical:PIKK p14.2 Seq+ 19577 ChimerSeq STARFusion TCGA_RNA-Seq L2HGDH-LMBRD1 L2HGDH chr14 50760833 - LMBRD1 chr6 70386433 - Exonic hg19 BRCA TCGA-A2-A0EY-01A 4 35 Out-of-frame Inter-chr q21.3 q13 Seq+ 19578 ChimerSeq STARFusion TCGA_RNA-Seq SPECC1-TMEM11 SPECC1 chr17 20059549 + TMEM11 chr17 21102153 - Exonic hg19 BRCA TCGA-A2-A0EY-01A 10 10 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 19579 ChimerSeq STARFusion TCGA_RNA-Seq TRPS1-TBC1D9B TRPS1 chr8 116599228 - TBC1D9B chr5 179321614 - Exonic hg19 BRCA TCGA-A2-A0EY-01A 5 20 In-Frame Inter-chr q23.3 Transcription factor Seq+ 19580 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC7-FAM74A4 ZCCHC7 chr9 37327831 + FAM74A4 chr9 65488372 - Exonic hg19 BRCA TCGA-A2-A0EY-01A 5 9 CDS-3'UTR Intra-chr p13.2 q12 19581 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSD1 PRSS27 chr16 2763530 - TPSD1 chr16 1308333 + Exonic hg19 BRCA TCGA-A2-A0EY-01A 5 3 In-Frame Intra-chr p13.3 p13.3 19582 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-CEP112 FBXL20 chr17 37558426 - CEP112 chr17 64026141 - Exonic hg19 BRCA TCGA-A2-A0EY-01A 4 5 5'UTR-CDS Intra-chr q12 q24.1 Seq+ 19583 ChimerSeq STARFusion TCGA_RNA-Seq NFKBIZ-LOC152225 NFKBIZ chr3 101568761 + LOC152225 chr3 101713405 + Exonic hg19 BRCA TCGA-BH-A0DK-01A 2 11 CDS-5'UTR Intra-chr q12.3 Seq+ 19584 ChimerSeq STARFusion TCGA_RNA-Seq RANBP3-LPXN RANBP3 chr19 5978072 - LPXN chr11 58295664 - Exonic hg19 BRCA TCGA-BH-A0DK-01A 2 0 In-Frame Inter-chr p13.3 q12.1 19585 ChimerSeq STARFusion TCGA_RNA-Seq ATP2A2-RRP1 ATP2A2 chr12 110781239 + RRP1 chr21 45211231 + Exonic hg19 BRCA TCGA-B6-A0RH-01A 38 99 In-Frame Inter-chr q24.11 q22.3 Seq+ 19586 ChimerSeq STARFusion TCGA_RNA-Seq CDK12-JUP CDK12 chr17 37657692 + JUP chr17 39928114 - Exonic hg19 BRCA TCGA-B6-A0RH-01A 5 4 CDS-5'UTR Intra-chr q12 Oncogene q21.2 Tumor suppressor gene Seq+ 19587 ChimerSeq STARFusion TCGA_RNA-Seq USP16-SCOC USP16 chr21 30414849 + SCOC chr4 141300723 + Exonic hg19 BRCA TCGA-B6-A0RH-01A 2 0 Out-of-frame Inter-chr q21.3 q31.1 19588 ChimerSeq STARFusion TCGA_RNA-Seq FLNB-SLMAP FLNB chr3 58088067 + SLMAP chr3 57875768 + Exonic hg19 BRCA TCGA-A2-A0SX-01A 4 7 In-Frame Intra-chr p14.3 p14.3 Seq+ 19589 ChimerSeq STARFusion TCGA_RNA-Seq LURAP1L-TYRP1 LURAP1L chr9 12776026 + TYRP1 chr9 12693912 + Exonic hg19 BRCA TCGA-A2-A0SX-01A 3 2 CDS-5'UTR Intra-chr p23 p23 Seq+ 19590 ChimerSeq STARFusion TCGA_RNA-Seq TLR6-LGI2 TLR6 chr4 38858382 - LGI2 chr4 25014121 - Exonic hg19 BRCA TCGA-A2-A0SX-01A 2 3 5'UTR-CDS Intra-chr p14 p15.2 19591 ChimerSeq STARFusion TCGA_RNA-Seq PTP4A1-EYS PTP4A1 chr6 64286890 + EYS chr6 65532715 - Exonic hg19 BRCA TCGA-E9-A2JS-01A 3 5 Out-of-frame Intra-chr q12 q12 Seq+ 19592 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 BRCA TCGA-E9-A2JS-01A 2 2 CDS-5'UTR Intra-chr p12 p12 Transcription factor 19593 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-FLJ44635 TPT1 chr13 45911393 - FLJ44635 chrX 71380327 + Exonic hg19 BRCA TCGA-PL-A8LX-01A 10 24 Out-of-frame Inter-chr q14.13 19594 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-FLJ44635 TPT1 chr13 45911405 - FLJ44635 chrX 71380315 + Exonic hg19 BRCA TCGA-PL-A8LX-01A 6 24 Out-of-frame Inter-chr q14.13 19595 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 BRCA TCGA-PL-A8LX-01A 10 1 In-Frame Intra-chr p11.21 p11.21 19596 ChimerSeq STARFusion TCGA_RNA-Seq NUMA1-SHANK2 NUMA1 chr11 71780888 - SHANK2 chr11 70349036 - Exonic hg19 BRCA TCGA-PL-A8LX-01A 2 7 5'UTR-CDS Intra-chr q13.4 Oncogene q13.4 Seq+ 19597 ChimerSeq STARFusion TCGA_RNA-Seq BIN3-PEBP4 BIN3 chr8 22526557 - PEBP4 chr8 22584733 - Exonic hg19 BRCA TCGA-E9-A22E-01A 56 64 Out-of-frame Intra-chr p21.3 p21.3 Seq+ 19598 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K1-PARN MAP3K1 chr5 56111882 + PARN chr16 14540938 - Exonic hg19 BRCA TCGA-E9-A22E-01A 16 14 In-Frame Inter-chr q11.2 STE:STE11 Oncogene Seq+ 19599 ChimerSeq STARFusion TCGA_RNA-Seq ADIPOR1-CYB5R1 ADIPOR1 chr1 202927313 - CYB5R1 chr1 202932855 - Exonic hg19 BRCA TCGA-E9-A22E-01A 9 14 5'UTR-CDS Intra-chr q32.1 q32.1 Seq+ 19600 ChimerSeq STARFusion TCGA_RNA-Seq ADIPOR1-CYB5R1 ADIPOR1 chr1 202923369 - CYB5R1 chr1 202932855 - Exonic hg19 BRCA TCGA-E9-A22E-01A 6 14 3'UTR-CDS Intra-chr q32.1 q32.1 Seq+ 19601 ChimerSeq STARFusion TCGA_RNA-Seq APBB2-NSUN7 APBB2 chr4 40829149 - NSUN7 chr4 40810324 + Exonic hg19 BRCA TCGA-E9-A22E-01A 2 12 Out-of-frame Intra-chr p13 p14 Seq+ 19602 ChimerSeq STARFusion TCGA_RNA-Seq PITPNC1-KHDRBS3 PITPNC1 chr17 65671658 + KHDRBS3 chr8 136660783 + Exonic hg19 BRCA TCGA-E9-A22E-01A 2 10 CDS-3'UTR Inter-chr q24.2 q24.23 Seq+ 19603 ChimerSeq STARFusion TCGA_RNA-Seq RBL1-CPNE1 RBL1 chr20 35724176 - CPNE1 chr20 34220845 - Exonic hg19 BRCA TCGA-C8-A134-01A 17 65 In-Frame Intra-chr q11.23 Tumor suppressor gene q11.22 Seq+ 19604 ChimerSeq STARFusion TCGA_RNA-Seq BRE-PRKCE BRE chr2 28268666 + PRKCE chr2 46313347 + Exonic hg19 BRCA TCGA-C8-A134-01A 11 29 In-Frame Intra-chr p21 Tumor suppressor gene Seq+ 19605 ChimerSeq STARFusion TCGA_RNA-Seq RHOBTB1-ATP6V1C2 RHOBTB1 chr10 62701562 - ATP6V1C2 chr2 10908845 + Exonic hg19 BRCA TCGA-C8-A134-01A 6 20 5'UTR-CDS Inter-chr q21.2 p25.1 Seq+ 19606 ChimerSeq STARFusion TCGA_RNA-Seq TRNAU1AP-RCC1 TRNAU1AP chr1 28893925 + RCC1 chr1 28861562 + Exonic hg19 BRCA TCGA-C8-A134-01A 4 21 Out-of-frame Intra-chr p35.3 p35.3 Seq+ 19607 ChimerSeq STARFusion TCGA_RNA-Seq ACSS2-GSS ACSS2 chr20 33502240 + GSS chr20 33516754 - Exonic hg19 BRCA TCGA-C8-A134-01A 3 19 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 19608 ChimerSeq STARFusion TCGA_RNA-Seq ZNF407-GKN2 ZNF407 chr18 72632648 + GKN2 chr2 69177887 - Exonic hg19 BRCA TCGA-C8-A134-01A 2 1 Out-of-frame Inter-chr q22.3 Transcription factor p13.3 Tumor suppressor gene 19609 ChimerSeq STARFusion TCGA_RNA-Seq SNORA50-CNOT1 SNORA50 chr16 58593708 - CNOT1 chr16 58594266 - Exonic hg19 BRCA TCGA-A7-A26F-01B 3 7 3'UTR-CDS Intra-chr q23.3 q21 19610 ChimerSeq STARFusion TCGA_RNA-Seq TMEM243-DMTF1 TMEM243 chr7 86848742 - DMTF1 chr7 86822514 + Exonic hg19 BRCA TCGA-A7-A26F-01B 3 3 Out-of-frame Intra-chr q21.12 q21.12 Tumor suppressor gene Transcription factor 19611 ChimerSeq STARFusion TCGA_RNA-Seq POLD3-RNF169 POLD3 chr11 74347320 + RNF169 chr11 74500671 + Exonic hg19 BRCA TCGA-A7-A26F-01B 2 1 In-Frame Intra-chr q13.4 q13.4 Seq+ 19612 ChimerSeq STARFusion TCGA_RNA-Seq DUS2L-UNC5C DUS2L chr16 68072052 + UNC5C chr4 96171818 - Exonic hg19 BRCA TCGA-E2-A15T-01A 4 13 In-Frame Inter-chr q22.3 Tumor suppressor gene Seq+ 19613 ChimerSeq STARFusion TCGA_RNA-Seq KCTD1-DAZAP1 KCTD1 chr18 24237324 - DAZAP1 chr19 1417499 + Exonic hg19 BRCA TCGA-E2-A15T-01A 2 0 Out-of-frame Inter-chr q11.2 p13.3 19614 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHM2-ZSWIM5 PLEKHM2 chr1 16011113 + ZSWIM5 chr1 45553909 - Exonic hg19 BRCA TCGA-AC-A2FO-01A 6 14 Out-of-frame Intra-chr p36.21 p34.1 Seq+ 19615 ChimerSeq STARFusion TCGA_RNA-Seq HERC2-TMOD3 HERC2 chr15 28566508 - TMOD3 chr15 52200973 + Exonic hg19 BRCA TCGA-AC-A2FO-01A 6 11 Out-of-frame Intra-chr q21.2 19616 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-RBM17 IGH@ chr14 106725201 - RBM17 chr10 6159273 + Exonic hg19 BRCA TCGA-AC-A2FO-01A 8 1 Out-of-frame Inter-chr 32.33 p15.1 19617 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-TTC19 IGH@ chr14 106552681 - TTC19 chr17 15903766 + Exonic hg19 BRCA TCGA-AC-A2FO-01A 7 2 Out-of-frame Inter-chr 32.33 p12 19618 ChimerSeq STARFusion TCGA_RNA-Seq TTC19-TOM1L2 TTC19 chr17 15930016 + TOM1L2 chr17 17797124 - Exonic hg19 BRCA TCGA-AC-A2FO-01A 3 7 Out-of-frame Intra-chr p12 p11.2 Tumor suppressor gene Seq+ 19619 ChimerSeq STARFusion TCGA_RNA-Seq MIR1204-SLC30A8 MIR1204 chr8 128808254 + SLC30A8 chr8 118169930 + Exonic hg19 BRCA TCGA-BH-A18L-01A 7 159 5'UTR-CDS Intra-chr q24.21 q24.11 Seq+ 19620 ChimerSeq STARFusion TCGA_RNA-Seq MYSM1-APOM MYSM1 chr1 59160801 - APOM chr6 31624249 + Exonic hg19 BRCA TCGA-BH-A18L-01A 23 29 In-Frame Inter-chr p32.1 Transcription factor Seq+ 19621 ChimerSeq STARFusion TCGA_RNA-Seq MYSM1-APOM MYSM1 chr1 59160801 - APOM chr6_ssto_hap7 2955047 + Exonic hg19 BRCA TCGA-BH-A18L-01A 15 32 CDS-5'UTR Inter-chr p32.1 Transcription factor Seq+ 19622 ChimerSeq STARFusion TCGA_RNA-Seq AP2A2-TALDO1 AP2A2 chr11 984753 + TALDO1 chr11 755879 + Exonic hg19 BRCA TCGA-BH-A18L-01A 10 16 In-Frame Intra-chr p15.5 p15.5 Seq+ 19623 ChimerSeq STARFusion TCGA_RNA-Seq PICALM-LOC100133315 PICALM chr11 85711686 - LOC100133315 chr11 71576900 - Exonic hg19 BRCA TCGA-BH-A18L-01A 6 22 CDS-3'UTR Intra-chr q14.2 19624 ChimerSeq STARFusion TCGA_RNA-Seq MYSM1-APOM MYSM1 chr1 59160801 - APOM chr6_cox_hap2 3133867 + Exonic hg19 BRCA TCGA-BH-A18L-01A 6 6 CDS-5'UTR Inter-chr p32.1 Transcription factor Seq+ 19625 ChimerSeq STARFusion TCGA_RNA-Seq TNS3-HSPA1L TNS3 chr7 47319762 - HSPA1L chr6_qbl_hap6 3073410 - Exonic hg19 BRCA TCGA-BH-A18L-01A 4 9 CDS-3'UTR Inter-chr p12.3 Seq+ 19626 ChimerSeq STARFusion TCGA_RNA-Seq LRP5-NOX4 LRP5 chr11 68207384 + NOX4 chr11 89088211 - Exonic hg19 BRCA TCGA-BH-A18L-01A 4 6 Out-of-frame Intra-chr q13.2 q14.3 Seq+ 19627 ChimerSeq STARFusion TCGA_RNA-Seq MSH2-TMEM247 MSH2 chr2 47635694 + TMEM247 chr2 46711383 + Exonic hg19 BRCA TCGA-BH-A18L-01A 4 4 Out-of-frame Intra-chr p21 Oncogene Tumor suppressor gene p21 Seq+ 19628 ChimerSeq STARFusion TCGA_RNA-Seq SMARCE1-HELZ SMARCE1 chr17 38798707 - HELZ chr17 65083197 - Exonic hg19 BRCA TCGA-A2-A3XZ-01A 95 94 In-Frame Intra-chr q21.2 q24.2 Seq+ 19629 ChimerSeq STARFusion TCGA_RNA-Seq CLSPN-PSMB2 CLSPN chr1 36202515 - PSMB2 chr1 36070883 - Exonic hg19 BRCA TCGA-A2-A3XZ-01A 7 45 Out-of-frame Intra-chr p34.3 p34.3 19630 ChimerSeq STARFusion TCGA_RNA-Seq SEC24D-CFI SEC24D chr4 119718838 - CFI chr4 110687980 - Exonic hg19 BRCA TCGA-A2-A3XZ-01A 8 15 In-Frame Intra-chr q26 q25 Seq+ 19631 ChimerSeq STARFusion TCGA_RNA-Seq PITPNC1-ANXA10 PITPNC1 chr17 65374318 + ANXA10 chr4 169083679 + Exonic hg19 BRCA TCGA-A2-A3XZ-01A 2 19 In-Frame Inter-chr q24.2 q32.3 Seq+ 19632 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-SMARCE1 ERBB2 chr17 37884002 + SMARCE1 chr17 38787057 - Exonic hg19 BRCA TCGA-A2-A3XZ-01A 3 2 Out-of-frame Intra-chr q12 Oncogene q21.2 19633 ChimerSeq STARFusion TCGA_RNA-Seq PPP2CB-PURG PPP2CB chr8 30655097 - PURG chr8 30854213 - Exonic hg19 BRCA TCGA-A2-A3XZ-01A 2 6 In-Frame Intra-chr p12 Tumor suppressor gene p12 Transcription factor Seq+ 19634 ChimerSeq STARFusion TCGA_RNA-Seq ABCA5-BCAS3 ABCA5 chr17 67323193 - BCAS3 chr17 58786580 + Exonic hg19 BRCA TCGA-A2-A3XZ-01A 2 5 5'UTR-CDS Intra-chr q24.3 q23.2 Seq+ 19635 ChimerSeq STARFusion TCGA_RNA-Seq C5orf42-NUP155 C5orf42 chr5 37227670 - NUP155 chr5 37301652 - Exonic hg19 BRCA TCGA-BH-A8FZ-01A 4 5 In-Frame Intra-chr p13.2 p13.2 Seq+ 19636 ChimerSeq STARFusion TCGA_RNA-Seq ALKBH5-MYO15A ALKBH5 chr17 18088327 + MYO15A chr17 18070904 + Exonic hg19 BRCA TCGA-E2-A108-01A 3 8 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 19637 ChimerSeq STARFusion TCGA_RNA-Seq ALKBH5-MYO15A ALKBH5 chr17 18088327 + MYO15A chr17 18074952 + Exonic hg19 BRCA TCGA-E2-A108-01A 2 8 In-Frame Intra-chr p11.2 p11.2 Seq+ 19638 ChimerSeq STARFusion TCGA_RNA-Seq NDUFA8-DNAJC25 NDUFA8 chr9 124921906 - DNAJC25 chr9 114405137 + Exonic hg19 BRCA TCGA-OL-A5DA-01A 5 30 CDS-5'UTR Intra-chr q33.2 q31.3 Seq+ 19639 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB24-CMAHP ZBTB24 chr6 109796602 - CMAHP chr6 25082107 - Exonic hg19 BRCA TCGA-OL-A5DA-01A 3 28 CDS-3'UTR Intra-chr q21 Transcription factor p22.3 Seq+ 19640 ChimerSeq STARFusion TCGA_RNA-Seq NDUFA8-DNAJC25 NDUFA8 chr9 124921906 - DNAJC25 chr9 114409387 + Exonic hg19 BRCA TCGA-OL-A5DA-01A 2 30 In-Frame Intra-chr q33.2 q31.3 Seq+ 19641 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB24-CMAHP ZBTB24 chr6 109796602 - CMAHP chr6 25081886 - Exonic hg19 BRCA TCGA-OL-A5DA-01A 2 28 CDS-3'UTR Intra-chr q21 Transcription factor p22.3 Seq+ 19642 ChimerSeq STARFusion TCGA_RNA-Seq LINC00993-TACC1P1 LINC00993 chr10 37635757 + TACC1P1 chr10 37811939 + Exonic hg19 BRCA TCGA-OL-A5DA-01A 4 7 Out-of-frame Intra-chr p11.21 p11.21 19643 ChimerSeq STARFusion TCGA_RNA-Seq GRIK2-CDKAL1 GRIK2 chr6 101847268 + CDKAL1 chr6 21065279 + Exonic hg19 BRCA TCGA-OL-A5DA-01A 2 7 Out-of-frame Intra-chr q16.3 p22.3 Seq+ 19644 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-IL2RB WIPF2 chr17 38375744 + IL2RB chr22 37540245 - Exonic hg19 BRCA TCGA-C8-A132-01A 261 742 5'UTR-5'UTR Inter-chr q21.2 q12.3 Seq+ 19645 ChimerSeq STARFusion TCGA_RNA-Seq PSMD2-ECE2 PSMD2 chr3 184022179 + ECE2 chr3 184005625 + Exonic hg19 BRCA TCGA-C8-A132-01A 18 97 In-Frame Intra-chr q27.1 q27.1 Seq+ 19646 ChimerSeq STARFusion TCGA_RNA-Seq TCTA-ARIH2 TCTA chr3 49450543 + ARIH2 chr3 49019093 + Exonic hg19 BRCA TCGA-C8-A132-01A 23 56 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 19647 ChimerSeq STARFusion TCGA_RNA-Seq MLLT3-CISD3 MLLT3 chr9 20620653 - CISD3 chr17 36887013 + Exonic hg19 BRCA TCGA-C8-A132-01A 25 46 Out-of-frame Inter-chr p21.3 Seq+ 19648 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-ABI3 ERBB2 chr17 37882106 + ABI3 chr17 47293893 + Exonic hg19 BRCA TCGA-C8-A132-01A 15 74 Out-of-frame Intra-chr q12 Oncogene q21.32 Seq+ 19649 ChimerSeq STARFusion TCGA_RNA-Seq EME1-LRRC59 EME1 chr17 48453554 + LRRC59 chr17 48460596 - Exonic hg19 BRCA TCGA-C8-A132-01A 13 41 Out-of-frame Intra-chr q21.33 q21.33 Seq+ 19650 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-ABI3 ERBB2 chr17 37881655 + ABI3 chr17 47293893 + Exonic hg19 BRCA TCGA-C8-A132-01A 3 74 Out-of-frame Intra-chr q12 Oncogene q21.32 Seq+ 19651 ChimerSeq STARFusion TCGA_RNA-Seq ATXN2-GIT2 ATXN2 chr12 111990084 - GIT2 chr12 110405308 - Exonic hg19 BRCA TCGA-C8-A132-01A 13 21 In-Frame Intra-chr q24.12 q24.11 Seq+ 19652 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-LINC00672 FBXL20 chr17 37499433 - LINC00672 chr17 37082025 + Exonic hg19 BRCA TCGA-C8-A132-01A 10 13 Out-of-frame Intra-chr q12 q12 19653 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS6-EME1 TMPRSS6 chr22 37485618 - EME1 chr17 48455956 + Exonic hg19 BRCA TCGA-C8-A132-01A 5 17 Out-of-frame Inter-chr q12.3 Tumor suppressor gene q21.33 Seq+ 19654 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS6-EME1 TMPRSS6 chr22 37485618 - EME1 chr17 48456135 + Exonic hg19 BRCA TCGA-C8-A132-01A 2 17 Out-of-frame Inter-chr q12.3 Tumor suppressor gene q21.33 Seq+ 19655 ChimerSeq STARFusion TCGA_RNA-Seq MED26-CERS1 MED26 chr19 16738683 - CERS1 chr19 18995076 - Exonic hg19 BRCA TCGA-C8-A132-01A 3 11 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 19656 ChimerSeq STARFusion TCGA_RNA-Seq MED26-GDF1 MED26 chr19 16738683 - GDF1 chr19 18995076 - Exonic hg19 BRCA TCGA-C8-A132-01A 3 11 CDS-5'UTR Intra-chr p13.11 p13.11 Seq+ 19657 ChimerSeq STARFusion TCGA_RNA-Seq PIP4K2B-MLLT6 PIP4K2B chr17 36933940 - MLLT6 chr17 36875770 + Exonic hg19 BRCA TCGA-C8-A132-01A 3 9 Out-of-frame Intra-chr q12 q12 Seq+ 19658 ChimerSeq STARFusion TCGA_RNA-Seq MED1-MRPL45 MED1 chr17 37599803 - MRPL45 chr17 36454415 + Exonic hg19 BRCA TCGA-C8-A132-01A 2 5 Out-of-frame Intra-chr q12 Tumor suppressor gene q12 Seq+ 19659 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEFL1-IKZF3 RAPGEFL1 chr17 38347014 + IKZF3 chr17 37949186 - Exonic hg19 BRCA TCGA-C8-A132-01A 2 4 Out-of-frame Intra-chr q21.1 q21.1 Tumor suppressor gene Transcription factor Seq+ 19660 ChimerSeq STARFusion TCGA_RNA-Seq MED1-MRPL45P2 MED1 chr17 37599803 - MRPL45P2 chr17 45568558 - Exonic hg19 BRCA TCGA-C8-A132-01A 2 2 CDS-3'UTR Intra-chr q12 Tumor suppressor gene q21.32 19661 ChimerSeq STARFusion TCGA_RNA-Seq ZNF251-SRCAP ZNF251 chr8 145979068 - SRCAP chr16 30740287 + Exonic hg19 BRCA TCGA-C8-A132-01A 2 0 Out-of-frame Inter-chr Transcription factor p11.2 Transcription factor 19662 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-LYZ FRS2 chr12 69925836 + LYZ chr12 69743888 + Exonic hg19 BRCA TCGA-A8-A06Z-01A 970 4275 5'UTR-CDS Intra-chr q15 q15 Seq+ 19663 ChimerSeq STARFusion TCGA_RNA-Seq PDPK1-MAPK8IP3 PDPK1 chr16 2616454 + MAPK8IP3 chr16 1809959 + Exonic hg19 BRCA TCGA-A8-A06Z-01A 30 86 In-Frame Intra-chr p13.3 p13.3 Seq+ 19664 ChimerSeq STARFusion TCGA_RNA-Seq TMEM135-CLMP TMEM135 chr11 86802437 + CLMP chr11 122955421 - Exonic hg19 BRCA TCGA-A8-A06Z-01A 13 34 In-Frame Intra-chr q14.2 q24.1 Seq+ 19665 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP32-AHNAK ARHGAP32 chr11 128993341 - AHNAK chr11 62201363 - Exonic hg19 BRCA TCGA-A8-A06Z-01A 6 28 Out-of-frame Intra-chr q24.3 q12.3 Tumor suppressor gene Seq+ 19666 ChimerSeq STARFusion TCGA_RNA-Seq SLC43A2-SMG6 SLC43A2 chr17 1516489 - SMG6 chr17 2187029 - Exonic hg19 BRCA TCGA-A8-A06Z-01A 7 23 In-Frame Intra-chr p13.3 Seq+ 19667 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP32-AHNAK ARHGAP32 chr11 128963526 - AHNAK chr11 62249398 - Exonic hg19 BRCA TCGA-A8-A06Z-01A 5 28 Out-of-frame Intra-chr q24.3 q12.3 Tumor suppressor gene Seq+ 19668 ChimerSeq STARFusion TCGA_RNA-Seq SHROOM3-IGJ SHROOM3 chr4 77507622 + IGJ chr4 71532231 - Exonic hg19 BRCA TCGA-A8-A06Z-01A 5 24 Out-of-frame Intra-chr q21.1 19669 ChimerSeq STARFusion TCGA_RNA-Seq USP22-SPACA3 USP22 chr17 20945978 - SPACA3 chr17 31323861 + Exonic hg19 BRCA TCGA-A8-A06Z-01A 3 9 Out-of-frame Intra-chr p11.2 q11.2 Seq+ 19670 ChimerSeq STARFusion TCGA_RNA-Seq FAM49B-ASAP1 FAM49B chr8 130983189 - ASAP1 chr8 131104389 - Exonic hg19 BRCA TCGA-A8-A06Z-01A 2 10 3'UTR-CDS Intra-chr q24.21 q24.22 Seq+ 19671 ChimerSeq STARFusion TCGA_RNA-Seq URI1-IFNL1 URI1 chr19 30462134 + IFNL1 chr19 39787445 + Exonic hg19 BRCA TCGA-A2-A3XX-01A 4 29 Out-of-frame Intra-chr q12 q13.2 Seq+ 19672 ChimerSeq STARFusion TCGA_RNA-Seq URI1-IFNL1 URI1 chr19 30433571 + IFNL1 chr19 39787445 + Exonic hg19 BRCA TCGA-A2-A3XX-01A 3 29 Out-of-frame Intra-chr q12 q13.2 Seq+ 19673 ChimerSeq STARFusion TCGA_RNA-Seq TRPS1-ZNRF2 TRPS1 chr8 116680772 - ZNRF2 chr7 30395344 + Exonic hg19 BRCA TCGA-A2-A3XX-01A 3 28 5'UTR-CDS Inter-chr q23.3 Transcription factor p14.3 Seq+ 19674 ChimerSeq STARFusion TCGA_RNA-Seq TRPS1-ZNRF2 TRPS1 chr8 116635828 - ZNRF2 chr7 30395344 + Exonic hg19 BRCA TCGA-A2-A3XX-01A 2 28 In-Frame Inter-chr q23.3 Transcription factor p14.3 Seq+ 19675 ChimerSeq STARFusion TCGA_RNA-Seq CTAGE5-MIPOL1 CTAGE5 chr14 39748741 + MIPOL1 chr14 37838722 + Exonic hg19 BRCA TCGA-BH-A0HL-01A 38 193 In-Frame Intra-chr q21.1 q13.3 Seq+ 19676 ChimerSeq STARFusion TCGA_RNA-Seq CLPB-PTPN1 CLPB chr11 72040751 - PTPN1 chr20 49191054 + Exonic hg19 BRCA TCGA-BH-A0HL-01A 29 57 In-Frame Inter-chr q13.4 q13.13 Tumor suppressor gene Seq+ 19677 ChimerSeq STARFusion TCGA_RNA-Seq C11orf30-ACER3 C11orf30 chr11 76183884 + ACER3 chr11 76637601 + Exonic hg19 BRCA TCGA-BH-A0HL-01A 14 99 In-Frame Intra-chr q13.5 Seq+ 19678 ChimerSeq STARFusion TCGA_RNA-Seq SULF2-GAB2 SULF2 chr20 46385933 - GAB2 chr11 77991947 - Exonic hg19 BRCA TCGA-BH-A0HL-01A 13 68 Out-of-frame Inter-chr q13.12 q14.1 Seq+ 19679 ChimerSeq STARFusion TCGA_RNA-Seq NARS2-TOP1 NARS2 chr11 78239888 - TOP1 chr20 39721112 + Exonic hg19 BRCA TCGA-BH-A0HL-01A 13 59 In-Frame Inter-chr q14.1 q12 Oncogene Seq+ 19680 ChimerSeq STARFusion TCGA_RNA-Seq ROCK2-PPP2CA ROCK2 chr2 11484122 - PPP2CA chr5 133541822 - Exonic hg19 BRCA TCGA-BH-A0HL-01A 14 52 In-Frame Inter-chr p25.1 AGC:DMPK q31.1 Tumor suppressor gene Seq+ 19681 ChimerSeq STARFusion TCGA_RNA-Seq ROCK2-CDKL3 ROCK2 chr2 11484122 - CDKL3 chr5 133541822 - Exonic hg19 BRCA TCGA-BH-A0HL-01A 14 48 CDS-3'UTR Inter-chr p25.1 AGC:DMPK q31.1 CMGC:CDKL 19682 ChimerSeq STARFusion TCGA_RNA-Seq STK10-SNX2 STK10 chr5 171614891 - SNX2 chr5 122161745 + Exonic hg19 BRCA TCGA-BH-A0HL-01A 10 47 In-Frame Intra-chr q35.1 Tumor suppressor gene q23.2 Seq+ 19683 ChimerSeq STARFusion TCGA_RNA-Seq TJP2-TMEM38B TJP2 chr9 71845148 + TMEM38B chr9 108536146 + Exonic hg19 BRCA TCGA-A2-A0EW-01A 4 28 In-Frame Intra-chr q21.11 q31.2 Seq+ 19684 ChimerSeq STARFusion TCGA_RNA-Seq ASTN2-LRRC37A5P ASTN2 chr9 119802098 - LRRC37A5P chr9 114365393 - Exonic hg19 BRCA TCGA-A2-A0EW-01A 6 14 CDS-3'UTR Intra-chr q33.1 q31.3 Seq+ 19685 ChimerSeq STARFusion TCGA_RNA-Seq HSDL2-FRMD3 HSDL2 chr9 115142460 + FRMD3 chr9 86004623 - Exonic hg19 BRCA TCGA-A2-A0EW-01A 6 8 Out-of-frame Intra-chr q32 q21.32 Seq+ 19686 ChimerSeq STARFusion TCGA_RNA-Seq CCDC176-RGS6 CCDC176 chr14 74486237 + RGS6 chr14 72921236 + Exonic hg19 BRCA TCGA-A2-A0EW-01A 3 13 Out-of-frame Intra-chr q24.2 19687 ChimerSeq STARFusion TCGA_RNA-Seq RBL1-CTNNBL1 RBL1 chr20 35717392 - CTNNBL1 chr20 36500327 + Exonic hg19 BRCA TCGA-AO-A03M-01B 51 113 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 19688 ChimerSeq STARFusion TCGA_RNA-Seq SNHG17-BCAS1 SNHG17 chr20 37055062 - BCAS1 chr20 52612589 - Exonic hg19 BRCA TCGA-AO-A03M-01B 48 118 Out-of-frame Intra-chr q11.23 q13.2 Seq+ 19689 ChimerSeq STARFusion TCGA_RNA-Seq SNHG17-BCAS1 SNHG17 chr20 37054583 - BCAS1 chr20 52612589 - Exonic hg19 BRCA TCGA-AO-A03M-01B 11 115 Out-of-frame Intra-chr q11.23 q13.2 Seq+ 19690 ChimerSeq STARFusion TCGA_RNA-Seq SAMHD1-DDX27 SAMHD1 chr20 35526225 - DDX27 chr20 47852870 + Exonic hg19 BRCA TCGA-AO-A03M-01B 6 34 In-Frame Intra-chr q11.23 q13.13 Seq+ 19691 ChimerSeq STARFusion TCGA_RNA-Seq SAMHD1-DDX27 SAMHD1 chr20 35526225 - DDX27 chr20 47852687 + Exonic hg19 BRCA TCGA-AO-A03M-01B 2 33 Out-of-frame Intra-chr q11.23 q13.13 Seq+ 19692 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-SNX20 WHSC1L1 chr8 38239317 - SNX20 chr16 50711446 - Exonic hg19 BRCA TCGA-BH-A1FB-01A 36 54 5'UTR-5'UTR Inter-chr p11.23 Tumor suppressor gene q12.1 Seq+ 19693 ChimerSeq STARFusion TCGA_RNA-Seq LPHN3-PPP3CA LPHN3 chr4 62679607 + PPP3CA chr4 102030235 - Exonic hg19 BRCA TCGA-E2-A10F-01A 2 3 In-Frame Intra-chr q24 Seq+ 19694 ChimerSeq STARFusion TCGA_RNA-Seq CTPS2-RBBP7 CTPS2 chrX 16716361 - RBBP7 chrX 16871967 - Exonic hg19 BRCA TCGA-A2-A0T7-01A 58 270 Out-of-frame Intra-chr p22.2 p22.2 Tumor suppressor gene Seq+ 19695 ChimerSeq STARFusion TCGA_RNA-Seq CTPS2-RBBP7 CTPS2 chrX 16716359 - RBBP7 chrX 16871965 - Exonic hg19 BRCA TCGA-A2-A0T7-01A 50 270 In-Frame Intra-chr p22.2 p22.2 Tumor suppressor gene Seq+ 19696 ChimerSeq STARFusion TCGA_RNA-Seq ADCY9-SRL ADCY9 chr16 4163751 - SRL chr16 4245787 - Exonic hg19 BRCA TCGA-A2-A0T7-01A 4 11 In-Frame Intra-chr p13.3 p13.3 Seq+ 19697 ChimerSeq STARFusion TCGA_RNA-Seq UBL3-CRISPLD2 UBL3 chr13 30346249 - CRISPLD2 chr16 84900503 + Exonic hg19 BRCA TCGA-A2-A0T7-01A 4 10 In-Frame Inter-chr q12.3 q24.1 Seq+ 19698 ChimerSeq STARFusion TCGA_RNA-Seq UAP1-LMX1A UAP1 chr1 162560301 + LMX1A chr1 165218877 - Exonic hg19 BRCA TCGA-A2-A0T7-01A 2 1 In-Frame Intra-chr q23.3 q23.3 Transcription factor Seq+ 19699 ChimerSeq STARFusion TCGA_RNA-Seq RMDN1-AKAP6 RMDN1 chr8 87487049 - AKAP6 chr14 33299054 + Exonic hg19 BRCA TCGA-E9-A22A-01A 17 77 Out-of-frame Inter-chr q21.3 q12 Seq+ 19700 ChimerSeq STARFusion TCGA_RNA-Seq WWP1-NUBPL WWP1 chr8 87393858 + NUBPL chr14 32295835 + Exonic hg19 BRCA TCGA-E9-A22A-01A 4 49 In-Frame Inter-chr q21.3 q12 Seq+ 19701 ChimerSeq STARFusion TCGA_RNA-Seq WWP1-NUBPL WWP1 chr8 87393858 + NUBPL chr14 32256986 + Exonic hg19 BRCA TCGA-E9-A22A-01A 4 49 Out-of-frame Inter-chr q21.3 q12 Seq+ 19702 ChimerSeq STARFusion TCGA_RNA-Seq WWP1-NUBPL WWP1 chr8 87393858 + NUBPL chr14 32142561 + Exonic hg19 BRCA TCGA-E9-A22A-01A 2 49 In-Frame Inter-chr q21.3 q12 Seq+ 19703 ChimerSeq STARFusion TCGA_RNA-Seq PDGFB-RPL3 PDGFB chr22 39627627 - RPL3 chr22 39714597 - Exonic hg19 BRCA TCGA-E9-A22A-01A 8 16 In-Frame Intra-chr q13.1 Oncogene q13.1 Seq+ 19704 ChimerSeq STARFusion TCGA_RNA-Seq SPATA6-MAD2L2 SPATA6 chr1 48917224 - MAD2L2 chr1 11737005 - Exonic hg19 BRCA TCGA-E9-A22A-01A 4 12 Out-of-frame Intra-chr p33 p36.22 Seq+ 19705 ChimerSeq STARFusion TCGA_RNA-Seq MKL2-CACNA1H MKL2 chr16 14234617 + CACNA1H chr16 1250256 + Exonic hg19 BRCA TCGA-E9-A22A-01A 2 4 Out-of-frame Intra-chr p13.12 p13.3 Seq+ 19706 ChimerSeq STARFusion TCGA_RNA-Seq MBTD1-MRPS23 MBTD1 chr17 49269564 - MRPS23 chr17 55918621 - Exonic hg19 BRCA TCGA-E9-A22A-01A 2 2 Out-of-frame Intra-chr q21.33 q22 19707 ChimerSeq STARFusion TCGA_RNA-Seq CLU-PBK CLU chr8 27472172 - PBK chr8 27690650 - Exonic hg19 BRCA TCGA-E9-A22A-01A 2 1 5'UTR-5'UTR Intra-chr p21.1 Tumor suppressor gene p21.1 Other:TOPK Seq+ 19708 ChimerSeq STARFusion TCGA_RNA-Seq GPR107-FNBP1 GPR107 chr9 132816352 + FNBP1 chr9 132757237 - Exonic hg19 BRCA TCGA-D8-A1X8-01A 3 5 In-Frame Intra-chr q34.11 q34.11 19709 ChimerSeq STARFusion TCGA_RNA-Seq TEX2-LOC645638 TEX2 chr17 62340528 - LOC645638 chr17 58162564 - Exonic hg19 BRCA TCGA-A8-A09I-01A 72 582 5'UTR-3'UTR Intra-chr q23.3 19710 ChimerSeq STARFusion TCGA_RNA-Seq DUSP14-EME1 DUSP14 chr17 35850059 + EME1 chr17 48452546 + Exonic hg19 BRCA TCGA-A8-A09I-01A 83 100 5'UTR-5'UTR Intra-chr q12 q21.33 Seq+ 19711 ChimerSeq STARFusion TCGA_RNA-Seq RARA-MYO1D RARA chr17 38487648 + MYO1D chr17 31107802 - Exonic hg19 BRCA TCGA-A8-A09I-01A 37 163 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q11.2 Seq+ 19712 ChimerSeq STARFusion TCGA_RNA-Seq RARA-MYO1D RARA chr17 38487648 + MYO1D chr17 31113810 - Exonic hg19 BRCA TCGA-A8-A09I-01A 7 163 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q11.2 Seq+ 19713 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-LOC645638 CLTC chr17 57721844 + LOC645638 chr17 58162564 - Exonic hg19 BRCA TCGA-A8-A09I-01A 29 67 CDS-3'UTR Intra-chr q23.1 19714 ChimerSeq STARFusion TCGA_RNA-Seq MED1-GDPD1 MED1 chr17 37579580 - GDPD1 chr17 57335112 + Exonic hg19 BRCA TCGA-A8-A09I-01A 19 80 In-Frame Intra-chr q12 Tumor suppressor gene q22 Seq+ 19715 ChimerSeq STARFusion TCGA_RNA-Seq C17orf75-TOP2A C17orf75 chr17 30662342 - TOP2A chr17 38569877 - Exonic hg19 BRCA TCGA-A8-A09I-01A 10 50 Out-of-frame Intra-chr q11.2 q21.2 Seq+ 19716 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-LOC645638 CLTC chr17 57721828 + LOC645638 chr17 58162564 - Exonic hg19 BRCA TCGA-A8-A09I-01A 3 67 CDS-3'UTR Intra-chr q23.1 19717 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57886157 + Exonic hg19 BRCA TCGA-A8-A09I-01A 13 19 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 19718 ChimerSeq STARFusion TCGA_RNA-Seq CDK12-PPM1E CDK12 chr17 37628016 + PPM1E chr17 57046900 + Exonic hg19 BRCA TCGA-A8-A09I-01A 8 29 Out-of-frame Intra-chr q12 Oncogene q22 Seq+ 19719 ChimerSeq STARFusion TCGA_RNA-Seq STXBP4-MSI2 STXBP4 chr17 53150437 + MSI2 chr17 55693331 + Exonic hg19 BRCA TCGA-A8-A09I-01A 3 38 In-Frame Intra-chr q22 q22 Seq+ 19720 ChimerSeq STARFusion TCGA_RNA-Seq AXIN1-ITFG3 AXIN1 chr16 402369 - ITFG3 chr16 299548 + Exonic hg19 BRCA TCGA-A8-A09I-01A 8 15 5'UTR-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene Seq+ 19721 ChimerSeq STARFusion TCGA_RNA-Seq MBTD1-EFCAB3 MBTD1 chr17 49336504 - EFCAB3 chr17 60451175 + Exonic hg19 BRCA TCGA-A8-A09I-01A 5 27 5'UTR-CDS Intra-chr q21.33 q23.2 Seq+ 19722 ChimerSeq STARFusion TCGA_RNA-Seq NF1-NLE1 NF1 chr17 29497015 + NLE1 chr17 33464212 - Exonic hg19 BRCA TCGA-A8-A09I-01A 6 15 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q12 Seq+ 19723 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-PGAP3 GRB7 chr17 37894645 + PGAP3 chr17 37830932 - Exonic hg19 BRCA TCGA-A8-A09I-01A 9 2 5'UTR-CDS Intra-chr q12 q12 Oncogene Seq+ 19724 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-CASC3 BCAS3 chr17 58824640 + CASC3 chr17 38318006 + Exonic hg19 BRCA TCGA-A8-A09I-01A 3 20 Out-of-frame Intra-chr q23.2 q21.1 Seq+ 19725 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-EZH1 WIPF2 chr17 38421398 + EZH1 chr17 40882936 - Exonic hg19 BRCA TCGA-A8-A09I-01A 5 10 CDS-5'UTR Intra-chr q21.2 q21.2 Tumor suppressor gene Seq+ 19726 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-TLK2 FBXL20 chr17 37499433 - TLK2 chr17 60637377 + Exonic hg19 BRCA TCGA-A8-A09I-01A 4 13 Out-of-frame Intra-chr q12 q23.2 Other:TLK Seq+ 19727 ChimerSeq STARFusion TCGA_RNA-Seq STXBP4-PPM1D STXBP4 chr17 53124515 + PPM1D chr17 58700882 + Exonic hg19 BRCA TCGA-A8-A09I-01A 5 8 Out-of-frame Intra-chr q22 q23.2 Seq+ 19728 ChimerSeq STARFusion TCGA_RNA-Seq HEATR6-MIEN1 HEATR6 chr17 58147072 - MIEN1 chr17 37886544 - Exonic hg19 BRCA TCGA-A8-A09I-01A 3 12 Out-of-frame Intra-chr q23.1 q12 Seq+ 19729 ChimerSeq STARFusion TCGA_RNA-Seq AKAP1-WIPF2 AKAP1 chr17 55162759 + WIPF2 chr17 38412643 + Exonic hg19 BRCA TCGA-A8-A09I-01A 4 6 5'UTR-5'UTR Intra-chr q22 q21.2 Seq+ 19730 ChimerSeq STARFusion TCGA_RNA-Seq NCK2-SFXN5 NCK2 chr2 106471745 + SFXN5 chr2 73198814 - Exonic hg19 BRCA TCGA-A8-A09I-01A 3 5 In-Frame Intra-chr q12.2 p13.2 Seq+ 19731 ChimerSeq STARFusion TCGA_RNA-Seq COL5A2-FN1 COL5A2 chr2 189897723 - FN1 chr2 216226737 - Exonic hg19 BRCA TCGA-A8-A09I-01A 3 2 Out-of-frame Intra-chr q32.2 q35 Oncogene 19732 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-PGAP3 GRB7 chr17 37894386 + PGAP3 chr17 37830932 - Exonic hg19 BRCA TCGA-A8-A09I-01A 3 2 5'UTR-CDS Intra-chr q12 q12 Oncogene Seq+ 19733 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-ERBB2 FBXL20 chr17 37557614 - ERBB2 chr17 37863243 + Exonic hg19 BRCA TCGA-A8-A09I-01A 2 2 Out-of-frame Intra-chr q12 q12 Oncogene 19734 ChimerSeq STARFusion TCGA_RNA-Seq EEPD1-POT1 EEPD1 chr7 36194811 + POT1 chr7 124467359 - Exonic hg19 BRCA TCGA-A8-A09I-01A 2 1 Out-of-frame Intra-chr p14.2 q31.33 Oncogene 19735 ChimerSeq STARFusion TCGA_RNA-Seq ATP5J2-DAP3 ATP5J2 chr7 99063752 - DAP3 chr1 155695173 + Exonic hg19 BRCA TCGA-A8-A09I-01A 2 0 Out-of-frame Inter-chr q22.1 q22 19736 ChimerSeq STARFusion TCGA_RNA-Seq DPY19L1P1-KDM2A DPY19L1P1 chr7 32621184 - KDM2A chr11 66948791 + Exonic hg19 BRCA TCGA-A8-A09I-01A 2 0 3'UTR-CDS Inter-chr p14.3 q13.2 Transcription factor 19737 ChimerSeq STARFusion TCGA_RNA-Seq FLJ27365-ATXN10 FLJ27365 chr22 46494438 + ATXN10 chr22 46238871 + Exonic hg19 BRCA TCGA-E9-A1R3-01A 3 21 Out-of-frame Intra-chr q13.31 19738 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PCTP RARA chr17 38474700 + PCTP chr17 53848467 + Exonic hg19 BRCA TCGA-AN-A0FV-01A 739 3325 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 19739 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PCTP RARA chr17 38465538 + PCTP chr17 53848467 + Exonic hg19 BRCA TCGA-AN-A0FV-01A 189 3325 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 19740 ChimerSeq STARFusion TCGA_RNA-Seq TMEM135-AAMDC TMEM135 chr11 86802437 + AAMDC chr11 77553525 + Exonic hg19 BRCA TCGA-AN-A0FV-01A 89 1175 Out-of-frame Intra-chr q14.2 q14.1 Seq+ 19741 ChimerSeq STARFusion TCGA_RNA-Seq TMEM135-AAMDC TMEM135 chr11 86802437 + AAMDC chr11 77552065 + Exonic hg19 BRCA TCGA-AN-A0FV-01A 71 1175 Out-of-frame Intra-chr q14.2 q14.1 Seq+ 19742 ChimerSeq STARFusion TCGA_RNA-Seq URGCP-CCDC129 URGCP chr7 43927014 - CCDC129 chr7 31681790 + Exonic hg19 BRCA TCGA-AN-A0FV-01A 40 205 In-Frame Intra-chr p13 p14.3 Seq+ 19743 ChimerSeq STARFusion TCGA_RNA-Seq STX16-MYT1 STX16 chr20 57227143 + MYT1 chr20 62821416 + Exonic hg19 BRCA TCGA-AN-A0FV-01A 31 141 5'UTR-5'UTR Intra-chr q13.32 Other:WEE Transcription factor Seq+ 19744 ChimerSeq STARFusion TCGA_RNA-Seq THRSP-KCTD14 THRSP chr11 77775387 + KCTD14 chr11 77728316 - Exonic hg19 BRCA TCGA-AN-A0FV-01A 19 66 3'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 19745 ChimerSeq STARFusion TCGA_RNA-Seq POLM-OGDH POLM chr7 44113224 - OGDH chr7 44739740 + Exonic hg19 BRCA TCGA-AN-A0FV-01A 6 43 In-Frame Intra-chr p13 p13 Seq+ 19746 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-SEZ6 WIPF2 chr17 38375744 + SEZ6 chr17 27309057 - Exonic hg19 BRCA TCGA-AN-A0FV-01A 8 27 5'UTR-CDS Intra-chr q21.2 q11.2 Seq+ 19747 ChimerSeq STARFusion TCGA_RNA-Seq PLXNB2-DLG2 PLXNB2 chr22 50733148 - DLG2 chr11 83691685 - Exonic hg19 BRCA TCGA-AN-A0FV-01A 3 31 5'UTR-CDS Inter-chr q13.33 q14.1 Seq+ 19748 ChimerSeq STARFusion TCGA_RNA-Seq MYO18A-ZBTB46 MYO18A chr17 27492960 - ZBTB46 chr20 62422143 - Exonic hg19 BRCA TCGA-AN-A0FV-01A 5 9 CDS-5'UTR Inter-chr q11.2 Oncogene q13.33 Transcription factor Seq+ 19749 ChimerSeq STARFusion TCGA_RNA-Seq PKN2-COL24A1 PKN2 chr1 89150311 + COL24A1 chr1 86453337 - Exonic hg19 BRCA TCGA-AN-A0FV-01A 2 6 In-Frame Intra-chr p22.2 AGC:PKN p22.3 Seq+ 19750 ChimerSeq STARFusion TCGA_RNA-Seq PGLS-GTPBP3 PGLS chr19 17628659 + GTPBP3 chr19 17452287 + Exonic hg19 BRCA TCGA-AN-A0FV-01A 2 3 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 19751 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-CASS4 FBXL20 chr17 37557614 - CASS4 chr20 55020956 + Exonic hg19 BRCA TCGA-AN-A0FV-01A 2 2 In-Frame Inter-chr q12 q13.31 Seq+ 19752 ChimerSeq STARFusion TCGA_RNA-Seq PMEPA1-PIGP PMEPA1 chr20 56284530 - PIGP chr21 38444837 - Exonic hg19 BRCA TCGA-BH-A1FE-01A 42 95 CDS-5'UTR Inter-chr q13.31 q22.13 Seq+ 19753 ChimerSeq STARFusion TCGA_RNA-Seq LDLR-TNPO2 LDLR chr19 11240346 + TNPO2 chr19 12834751 - Exonic hg19 BRCA TCGA-BH-A1FE-01A 9 52 CDS-5'UTR Intra-chr p13.2 p13.13 Seq+ 19754 ChimerSeq STARFusion TCGA_RNA-Seq PDSS2-SMARCA4 PDSS2 chr6 107780194 - SMARCA4 chr19 11094800 + Exonic hg19 BRCA TCGA-BH-A1FE-01A 4 65 CDS-5'UTR Inter-chr q21 Tumor suppressor gene p13.2 Oncogene Tumor suppressor gene Seq+ 19755 ChimerSeq STARFusion TCGA_RNA-Seq PDSS2-SMARCA4 PDSS2 chr6 107780194 - SMARCA4 chr19 11094797 + Exonic hg19 BRCA TCGA-BH-A1FE-01A 4 65 CDS-5'UTR Inter-chr q21 Tumor suppressor gene p13.2 Oncogene Tumor suppressor gene Seq+ 19756 ChimerSeq STARFusion TCGA_RNA-Seq LDLR-TNPO2 LDLR chr19 11240346 + TNPO2 chr19 12834179 - Exonic hg19 BRCA TCGA-BH-A1FE-01A 3 52 CDS-5'UTR Intra-chr p13.2 p13.13 Seq+ 19757 ChimerSeq STARFusion TCGA_RNA-Seq SEC63-SCML4 SEC63 chr6 108279090 - SCML4 chr6 108071017 - Exonic hg19 BRCA TCGA-BH-A1FE-01A 3 21 Out-of-frame Intra-chr q21 q21 Transcription factor Seq+ 19758 ChimerSeq STARFusion TCGA_RNA-Seq C6orf203-BEND3 C6orf203 chr6 107361434 + BEND3 chr6 107392154 - Exonic hg19 BRCA TCGA-BH-A1FE-01A 5 8 Out-of-frame Intra-chr q21 q21 Seq+ 19759 ChimerSeq STARFusion TCGA_RNA-Seq FOXP1-C5orf51 FOXP1 chr3 71348971 - C5orf51 chr5 41907838 + Exonic hg19 BRCA TCGA-BH-A1FE-01A 3 6 5'UTR-CDS Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor p13.1 Seq+ 19760 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-NCR3 PTK2 chr8 141828376 - NCR3 chr6_qbl_hap6 2854331 - Exonic hg19 BRCA TCGA-BH-A1FE-01A 4 1 CDS-3'UTR Inter-chr q24.3 Seq+ 19761 ChimerSeq STARFusion TCGA_RNA-Seq NIN-NEMF NIN chr14 51273455 - NEMF chr14 50292673 - Exonic hg19 BRCA TCGA-BH-A1FE-01A 2 7 Out-of-frame Intra-chr q22.1 Oncogene q21.3 Seq+ 19762 ChimerSeq STARFusion TCGA_RNA-Seq STON2-TJP2 STON2 chr14 81893446 - TJP2 chr9 71827464 + Exonic hg19 BRCA TCGA-BH-A1FE-01A 3 3 5'UTR-5'UTR Inter-chr q31.1 q21.11 Seq+ 19763 ChimerSeq STARFusion TCGA_RNA-Seq SCML4-TUSC3 SCML4 chr6 108093376 - TUSC3 chr8 15480589 + Exonic hg19 BRCA TCGA-BH-A1FE-01A 2 3 In-Frame Inter-chr q21 Transcription factor p22 Seq+ 19764 ChimerSeq STARFusion TCGA_RNA-Seq ATG5-COL19A1 ATG5 chr6 106727536 - COL19A1 chr6 70608840 + Exonic hg19 BRCA TCGA-BH-A1FE-01A 2 0 In-Frame Intra-chr q21 q13 19765 ChimerSeq STARFusion TCGA_RNA-Seq EFHD1-EIF4E2 EFHD1 chr2 233537153 + EIF4E2 chr2 233428957 + Exonic hg19 BRCA TCGA-AO-A0JE-01A 168 483 In-Frame Intra-chr q37.1 q37.1 Seq+ 19766 ChimerSeq STARFusion TCGA_RNA-Seq SMC1A-GTPBP6 SMC1A chrX 53421698 - GTPBP6 chrY 171864 - Exonic hg19 BRCA TCGA-AO-A0JE-01A 7 26 In-Frame Inter-chr p11.22 p22.33 Seq+ 19767 ChimerSeq STARFusion TCGA_RNA-Seq ZFAT-TG ZFAT chr8 135577576 - TG chr8 134144056 + Exonic hg19 BRCA TCGA-AO-A0JE-01A 2 17 Out-of-frame Intra-chr q24.22 Transcription factor q24.22 Seq+ 19768 ChimerSeq STARFusion TCGA_RNA-Seq MCPH1-CSMD1 MCPH1 chr8 6312773 + CSMD1 chr8 3351248 - Exonic hg19 BRCA TCGA-AO-A0JE-01A 2 8 In-Frame Intra-chr p23.1 Tumor suppressor gene p23.2 Tumor suppressor gene Seq+ 19769 ChimerSeq STARFusion TCGA_RNA-Seq NKD1-BRD7 NKD1 chr16 50583466 + BRD7 chr16 50388833 - Exonic hg19 BRCA TCGA-AO-A0JE-01A 2 0 In-Frame Intra-chr q12.1 q12.1 Tumor suppressor gene 19770 ChimerSeq STARFusion TCGA_RNA-Seq SCAPER-RASGRF1 SCAPER chr15 77134075 - RASGRF1 chr15 79327552 - Exonic hg19 BRCA TCGA-AO-A0JE-01A 2 0 Out-of-frame Intra-chr q24.3 q25.1 19771 ChimerSeq STARFusion TCGA_RNA-Seq ZFP112-CYB5A ZFP112 chr19 44860778 - CYB5A chr18 71930712 - Exonic hg19 BRCA TCGA-AO-A0JE-01A 2 0 5'UTR-CDS Inter-chr q22.3 Tumor suppressor gene 19772 ChimerSeq STARFusion TCGA_RNA-Seq SPCS2-PAK1 SPCS2 chr11 74660444 + PAK1 chr11 77051808 - Exonic hg19 BRCA TCGA-E2-A1IU-01A 8 211 Out-of-frame Intra-chr q13.4 q14.1 STE:STE20 19773 ChimerSeq STARFusion TCGA_RNA-Seq NUMA1-PPP2R5B NUMA1 chr11 71780888 - PPP2R5B chr11 64694184 + Exonic hg19 BRCA TCGA-E2-A1IU-01A 14 117 5'UTR-CDS Intra-chr q13.4 Oncogene q13.1 Seq+ 19774 ChimerSeq STARFusion TCGA_RNA-Seq NUMA1-PPP2R5B NUMA1 chr11 71780888 - PPP2R5B chr11 64695274 + Exonic hg19 BRCA TCGA-E2-A1IU-01A 2 113 5'UTR-CDS Intra-chr q13.4 Oncogene q13.1 Seq+ 19775 ChimerSeq STARFusion TCGA_RNA-Seq CHRDL2-COPB1 CHRDL2 chr11 74429765 - COPB1 chr11 14491109 - Exonic hg19 BRCA TCGA-E2-A1IU-01A 5 61 In-Frame Intra-chr q13.4 p15.2 Seq+ 19776 ChimerSeq STARFusion TCGA_RNA-Seq POLR1C-MDGA1 POLR1C chr6 43487576 + MDGA1 chr6 37631882 - Exonic hg19 BRCA TCGA-AC-A5XS-01A 3 11 In-Frame Intra-chr p21.1 p21.2 Seq+ 19777 ChimerSeq STARFusion TCGA_RNA-Seq SERINC2-TPGS1 SERINC2 chr1 31902385 + TPGS1 chr19 518889 + Exonic hg19 BRCA TCGA-AC-A5XS-01A 2 2 In-Frame Inter-chr p35.2 p13.3 19778 ChimerSeq STARFusion TCGA_RNA-Seq IGF1R-WDR93 IGF1R chr15 99251336 + WDR93 chr15 90244938 + Exonic hg19 BRCA TCGA-A1-A0SF-01A 4 11 CDS-5'UTR Intra-chr q26.3 TK:InsR Oncogene q26.1 Seq+ 19779 ChimerSeq STARFusion TCGA_RNA-Seq SEMA4B-LINC00925 SEMA4B chr15 90744967 + LINC00925 chr15 89931048 + Exonic hg19 BRCA TCGA-A1-A0SF-01A 4 6 Out-of-frame Intra-chr q26.1 19780 ChimerSeq STARFusion TCGA_RNA-Seq BOC-PHLDB2 BOC chr3 113003414 + PHLDB2 chr3 111651116 + Exonic hg19 BRCA TCGA-E2-A1B6-01A 2 26 In-Frame Intra-chr q13.2 q13.2 Seq+ 19781 ChimerSeq STARFusion TCGA_RNA-Seq SSR3-VEPH1 SSR3 chr3 156271444 - VEPH1 chr3 157188318 - Exonic hg19 BRCA TCGA-E2-A1B6-01A 4 9 Out-of-frame Intra-chr q25.31 q25.32 Seq+ 19782 ChimerSeq STARFusion TCGA_RNA-Seq H6PD-HIVEP3 H6PD chr1 9307142 + HIVEP3 chr1 42166666 - Exonic hg19 BRCA TCGA-E2-A1B6-01A 2 8 CDS-5'UTR Intra-chr p36.22 p34.2 Tumor suppressor gene Transcription factor Seq+ 19783 ChimerSeq STARFusion TCGA_RNA-Seq FBN1-FUS FBN1 chr15 48786401 - FUS chr16 31199646 + Exonic hg19 BRCA TCGA-E2-A1B6-01A 2 1 In-Frame Inter-chr q21.1 p11.2 Tumor suppressor gene 19784 ChimerSeq STARFusion TCGA_RNA-Seq NRIP1-HIBADH NRIP1 chr21 16386665 - HIBADH chr7 27570967 - Exonic hg19 BRCA TCGA-AN-A0FZ-01A 324 1502 5'UTR-CDS Inter-chr q21.1 p15.2 Seq+ 19785 ChimerSeq STARFusion TCGA_RNA-Seq NRIP1-HIBADH NRIP1 chr21 16415816 - HIBADH chr7 27570967 - Exonic hg19 BRCA TCGA-AN-A0FZ-01A 80 1502 5'UTR-CDS Inter-chr q21.1 p15.2 Seq+ 19786 ChimerSeq STARFusion TCGA_RNA-Seq NRIP1-HIBADH NRIP1 chr21 16363522 - HIBADH chr7 27570967 - Exonic hg19 BRCA TCGA-AN-A0FZ-01A 48 1502 5'UTR-CDS Inter-chr q21.1 p15.2 Seq+ 19787 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-MDM1 CPSF6 chr12 69656342 + MDM1 chr12 68689146 - Exonic hg19 BRCA TCGA-AN-A0FZ-01A 32 192 3'UTR-CDS Intra-chr q15 q15 Seq+ 19788 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-MDM1 CPSF6 chr12 69656342 + MDM1 chr12 68690762 - Exonic hg19 BRCA TCGA-AN-A0FZ-01A 8 192 3'UTR-CDS Intra-chr q15 q15 Seq+ 19789 ChimerSeq STARFusion TCGA_RNA-Seq RAB11FIP3-CREB5 RAB11FIP3 chr16 521389 + CREB5 chr7 28843816 + Exonic hg19 BRCA TCGA-AN-A0FZ-01A 19 36 In-Frame Inter-chr p15.1 Transcription factor Seq+ 19790 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL8-TSHZ2 OSBPL8 chr12 76844631 - TSHZ2 chr20 52103683 + Exonic hg19 BRCA TCGA-AN-A0FZ-01A 3 97 CDS-3'UTR Inter-chr q21.2 q13.2 Transcription factor Seq+ 19791 ChimerSeq STARFusion TCGA_RNA-Seq RAB11FIP3-CREB5 RAB11FIP3 chr16 521387 + CREB5 chr7 28843814 + Exonic hg19 BRCA TCGA-AN-A0FZ-01A 17 36 Out-of-frame Inter-chr p15.1 Transcription factor Seq+ 19792 ChimerSeq STARFusion TCGA_RNA-Seq HS2ST1-GBP6 HS2ST1 chr1 87380843 + GBP6 chr1 89829597 + Exonic hg19 BRCA TCGA-AN-A0FZ-01A 9 31 CDS-5'UTR Intra-chr p22.3 p22.2 Seq+ 19793 ChimerSeq STARFusion TCGA_RNA-Seq SEP15-COL24A1 2019_ 9_ 15_ chr1 87346345 - COL24A1 chr1 86203188 - Exonic hg19 BRCA TCGA-AN-A0FZ-01A 5 33 Out-of-frame Intra-chr p22.3 Seq+ 19794 ChimerSeq STARFusion TCGA_RNA-Seq SKAP2-SCIN SKAP2 chr7 26883649 - SCIN chr7 12617689 + Exonic hg19 BRCA TCGA-AN-A0FZ-01A 8 17 In-Frame Intra-chr p15.2 p21.3 Seq+ 19795 ChimerSeq STARFusion TCGA_RNA-Seq HS2ST1-GBP6 HS2ST1 chr1 87380843 + GBP6 chr1 89834088 + Exonic hg19 BRCA TCGA-AN-A0FZ-01A 4 31 CDS-5'UTR Intra-chr p22.3 p22.2 Seq+ 19796 ChimerSeq STARFusion TCGA_RNA-Seq TRIM44-SLC5A12 TRIM44 chr11 35827992 + SLC5A12 chr11 26734253 - Exonic hg19 BRCA TCGA-AN-A0FZ-01A 6 17 3'UTR-CDS Intra-chr p13 p14.2 Seq+ 19797 ChimerSeq STARFusion TCGA_RNA-Seq PCSK6-LINS PCSK6 chr15 101983761 - LINS chr15 101114446 - Exonic hg19 BRCA TCGA-AN-A0FZ-01A 6 15 In-Frame Intra-chr q26.3 Seq+ 19798 ChimerSeq STARFusion TCGA_RNA-Seq NARFL-RBBP6 NARFL chr16 790920 - RBBP6 chr16 24557484 + Exonic hg19 BRCA TCGA-AN-A0FZ-01A 7 10 Out-of-frame Intra-chr p13.3 p12.1 Seq+ 19799 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-MDM1 FRS2 chr12 69925836 + MDM1 chr12 68725001 - Exonic hg19 BRCA TCGA-AN-A0FZ-01A 6 13 5'UTR-CDS Intra-chr q15 q15 Seq+ 19800 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD42-RHOD ANKRD42 chr11 82959129 + RHOD chr11 66837896 + Exonic hg19 BRCA TCGA-AN-A0FZ-01A 5 11 3'UTR-CDS Intra-chr q14.1 q13.2 Seq+ 19801 ChimerSeq STARFusion TCGA_RNA-Seq BMS1-PLEKHA7 BMS1 chr10 43297666 + PLEKHA7 chr11 16892729 - Exonic hg19 BRCA TCGA-AN-A0FZ-01A 3 9 Out-of-frame Inter-chr q11.21 p15.1 Seq+ 19802 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-MDM1 FRS2 chr12 69931763 + MDM1 chr12 68725001 - Exonic hg19 BRCA TCGA-AN-A0FZ-01A 2 13 5'UTR-CDS Intra-chr q15 q15 Seq+ 19803 ChimerSeq STARFusion TCGA_RNA-Seq KBTBD2-LINC00649 KBTBD2 chr7 32931148 - LINC00649 chr21 35341538 + Exonic hg19 BRCA TCGA-AN-A0FZ-01A 4 3 Out-of-frame Inter-chr p14.3 q22.11 19804 ChimerSeq STARFusion TCGA_RNA-Seq BMS1-PLEKHA7 BMS1 chr10 43294073 + PLEKHA7 chr11 16892729 - Exonic hg19 BRCA TCGA-AN-A0FZ-01A 2 9 Out-of-frame Inter-chr q11.21 p15.1 Seq+ 19805 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-NAV3 CPSF6 chr12 69656342 + NAV3 chr12 78334099 + Exonic hg19 BRCA TCGA-AN-A0FZ-01A 2 5 3'UTR-CDS Intra-chr q15 q21.2 Seq+ 19806 ChimerSeq STARFusion TCGA_RNA-Seq KBTBD2-HDAC9 KBTBD2 chr7 32931148 - HDAC9 chr7 18535885 + Exonic hg19 BRCA TCGA-AN-A0FZ-01A 3 1 5'UTR-5'UTR Intra-chr p14.3 p21.1 Seq+ 19807 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF2-VANGL1 ZNRF2 chr7 30363353 + VANGL1 chr1 116224985 + Exonic hg19 BRCA TCGA-AN-A0FZ-01A 2 3 Out-of-frame Inter-chr p14.3 p13.1 Seq+ 19808 ChimerSeq STARFusion TCGA_RNA-Seq TMEM50B-MPP6 TMEM50B chr21 34811521 - MPP6 chr7 24718750 + Exonic hg19 BRCA TCGA-AN-A0FZ-01A 2 2 3'UTR-CDS Inter-chr p15.3 19809 ChimerSeq STARFusion TCGA_RNA-Seq IKZF3-PNMT IKZF3 chr17 38020373 - PNMT chr17 37825882 + Exonic hg19 BRCA TCGA-3C-AALI-01A 209 565 In-Frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q12 Seq+ 19810 ChimerSeq STARFusion TCGA_RNA-Seq CWC25-SLC35B1 CWC25 chr17 36981419 - SLC35B1 chr17 47783696 - Exonic hg19 BRCA TCGA-3C-AALI-01A 20 76 Out-of-frame Intra-chr q12 q21.33 Seq+ 19811 ChimerSeq STARFusion TCGA_RNA-Seq PRKCA-RGS9 PRKCA chr17 64637584 + RGS9 chr17 63221120 + Exonic hg19 BRCA TCGA-3C-AALI-01A 13 81 Out-of-frame Intra-chr q24.2 q24.1 Seq+ 19812 ChimerSeq STARFusion TCGA_RNA-Seq CWC25-SLC35B1 CWC25 chr17 36981419 - SLC35B1 chr17 47783671 - Exonic hg19 BRCA TCGA-3C-AALI-01A 8 76 Out-of-frame Intra-chr q12 q21.33 Seq+ 19813 ChimerSeq STARFusion TCGA_RNA-Seq ACACA-PRKCA ACACA chr17 35468466 - PRKCA chr17 64637473 + Exonic hg19 BRCA TCGA-3C-AALI-01A 9 66 Out-of-frame Intra-chr q24.2 Seq+ 19814 ChimerSeq STARFusion TCGA_RNA-Seq PRKCA-RGS9 PRKCA chr17 64637588 + RGS9 chr17 63221120 + Exonic hg19 BRCA TCGA-3C-AALI-01A 4 81 Out-of-frame Intra-chr q24.2 q24.1 Seq+ 19815 ChimerSeq STARFusion TCGA_RNA-Seq CWC25-SLC35B1 CWC25 chr17 36981419 - SLC35B1 chr17 47783258 - Exonic hg19 BRCA TCGA-3C-AALI-01A 2 76 In-Frame Intra-chr q12 q21.33 Seq+ 19816 ChimerSeq STARFusion TCGA_RNA-Seq CDK12-PLEKHM1P CDK12 chr17 37619370 + PLEKHM1P chr17 62825367 - Exonic hg19 BRCA TCGA-3C-AALI-01A 13 20 CDS-3'UTR Intra-chr q12 Oncogene 19817 ChimerSeq STARFusion TCGA_RNA-Seq HELZ-TAF15 HELZ chr17 65124767 - TAF15 chr17 34144720 + Exonic hg19 BRCA TCGA-3C-AALI-01A 7 30 Out-of-frame Intra-chr q24.2 q12 Seq+ 19818 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-PITPNC1 FBXL20 chr17 37557614 - PITPNC1 chr17 65688688 + Exonic hg19 BRCA TCGA-3C-AALI-01A 7 25 In-Frame Intra-chr q12 q24.2 Seq+ 19819 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-FBXL20 STARD3 chr17 37817338 + FBXL20 chr17 37459892 - Exonic hg19 BRCA TCGA-3C-AALI-01A 6 21 In-Frame Intra-chr q12 q12 Seq+ 19820 ChimerSeq STARFusion TCGA_RNA-Seq BPTF-PLXDC1 BPTF chr17 65962772 + PLXDC1 chr17 37243955 - Exonic hg19 BRCA TCGA-3C-AALI-01A 5 21 In-Frame Intra-chr q24.2 Transcription factor q12 Seq+ 19821 ChimerSeq STARFusion TCGA_RNA-Seq CDK12-FAM20A CDK12 chr17 37628016 + FAM20A chr17 66551884 - Exonic hg19 BRCA TCGA-3C-AALI-01A 5 20 In-Frame Intra-chr q12 Oncogene q24.2 Seq+ 19822 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-FAM20A STARD3 chr17 37793484 + FAM20A chr17 66548092 - Exonic hg19 BRCA TCGA-3C-AALI-01A 6 14 5'UTR-CDS Intra-chr q12 q24.2 Seq+ 19823 ChimerSeq STARFusion TCGA_RNA-Seq UBE2Z-MRPL45 UBE2Z chr17 46990383 + MRPL45 chr17 36462500 + Exonic hg19 BRCA TCGA-3C-AALI-01A 5 15 In-Frame Intra-chr q21.32 q12 Seq+ 19824 ChimerSeq STARFusion TCGA_RNA-Seq PSMD12-TLK2 PSMD12 chr17 65362528 - TLK2 chr17 60558482 + Exonic hg19 BRCA TCGA-3C-AALI-01A 5 10 CDS-5'UTR Intra-chr q24.2 q23.2 Other:TLK Seq+ 19825 ChimerSeq STARFusion TCGA_RNA-Seq TUBD1-MYO18A TUBD1 chr17 57968192 - MYO18A chr17 27401932 - Exonic hg19 BRCA TCGA-3C-AALI-01A 4 13 Out-of-frame Intra-chr q23.1 q11.2 Oncogene Seq+ 19826 ChimerSeq STARFusion TCGA_RNA-Seq TUBD1-TIAF1 TUBD1 chr17 57968192 - TIAF1 chr17 27401932 - Exonic hg19 BRCA TCGA-3C-AALI-01A 4 13 5'UTR-5'UTR Intra-chr q23.1 q11.2 Oncogene Seq+ 19827 ChimerSeq STARFusion TCGA_RNA-Seq ARSG-CDK12 ARSG chr17 66352945 + CDK12 chr17 37667782 + Exonic hg19 BRCA TCGA-3C-AALI-01A 6 4 In-Frame Intra-chr q24.2 q12 Oncogene Seq+ 19828 ChimerSeq STARFusion TCGA_RNA-Seq PSMD12-TLK2 PSMD12 chr17 65362528 - TLK2 chr17 60558485 + Exonic hg19 BRCA TCGA-3C-AALI-01A 4 10 CDS-5'UTR Intra-chr q24.2 q23.2 Other:TLK Seq+ 19829 ChimerSeq STARFusion TCGA_RNA-Seq TUBD1-MYO18A TUBD1 chr17 57970058 - MYO18A chr17 27401932 - Exonic hg19 BRCA TCGA-3C-AALI-01A 3 13 5'UTR-CDS Intra-chr q23.1 q11.2 Oncogene Seq+ 19830 ChimerSeq STARFusion TCGA_RNA-Seq TUBD1-TIAF1 TUBD1 chr17 57970058 - TIAF1 chr17 27401932 - Exonic hg19 BRCA TCGA-3C-AALI-01A 3 13 5'UTR-5'UTR Intra-chr q23.1 q11.2 Oncogene Seq+ 19831 ChimerSeq STARFusion TCGA_RNA-Seq MGAT4A-KIAA1211L MGAT4A chr2 99342702 - KIAA1211L chr2 99463273 - Exonic hg19 BRCA TCGA-3C-AALI-01A 2 16 Out-of-frame Intra-chr q11.2 q11.2 19832 ChimerSeq STARFusion TCGA_RNA-Seq SDF2-MSI2 SDF2 chr17 26982305 - MSI2 chr17 55334459 + Exonic hg19 BRCA TCGA-3C-AALI-01A 5 4 Out-of-frame Intra-chr q11.2 q22 Seq+ 19833 ChimerSeq STARFusion TCGA_RNA-Seq SUPT6H-PRKCA SUPT6H chr17 27015236 + PRKCA chr17 64492319 + Exonic hg19 BRCA TCGA-3C-AALI-01A 5 3 Out-of-frame Intra-chr q11.2 q24.2 Seq+ 19834 ChimerSeq STARFusion TCGA_RNA-Seq TC2N-FBLN5 TC2N chr14 92278656 - FBLN5 chr14 92361416 - Exonic hg19 BRCA TCGA-3C-AALI-01A 5 3 In-Frame Intra-chr q32.12 Seq+ 19835 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-FAM20A FBXL20 chr17 37499433 - FAM20A chr17 66551884 - Exonic hg19 BRCA TCGA-3C-AALI-01A 2 9 In-Frame Intra-chr q12 q24.2 19836 ChimerSeq STARFusion TCGA_RNA-Seq TEX2-ACSF2 TEX2 chr17 62248460 - ACSF2 chr17 48538038 + Exonic hg19 BRCA TCGA-3C-AALI-01A 2 8 Out-of-frame Intra-chr q23.3 q21.33 Seq+ 19837 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-STXBP4 STARD3 chr17 37818597 + STXBP4 chr17 53150261 + Exonic hg19 BRCA TCGA-3C-AALI-01A 2 3 In-Frame Intra-chr q12 q22 Seq+ 19838 ChimerSeq STARFusion TCGA_RNA-Seq SLC16A6-ARHGAP23 SLC16A6 chr17 66287227 - ARHGAP23 chr17 36666180 + Exonic hg19 BRCA TCGA-3C-AALI-01A 2 1 5'UTR-CDS Intra-chr q24.2 q12 19839 ChimerSeq STARFusion TCGA_RNA-Seq TMEM109-CD5 TMEM109 chr11 60681740 + CD5 chr11 60882528 + Exonic hg19 BRCA TCGA-BH-A28Q-01A 7 29 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 19840 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-PRKG1 MYH9 chr22 36783852 - PRKG1 chr10 53564345 + Exonic hg19 BRCA TCGA-BH-A28Q-01A 3 1 5'UTR-CDS Inter-chr q12.3 Oncogene Tumor suppressor gene q11.23 19841 ChimerSeq STARFusion TCGA_RNA-Seq SMYD3-WLS SMYD3 chr1 246518333 - WLS chr1 68659910 - Exonic hg19 BRCA TCGA-E9-A1N6-01A 4 38 Out-of-frame Intra-chr q44 Transcription factor p31.3 Seq+ 19842 ChimerSeq STARFusion TCGA_RNA-Seq GNA12-ADSS GNA12 chr7 2834562 - ADSS chr1 244601070 - Exonic hg19 BRCA TCGA-E9-A1N6-01A 3 24 CDS-5'UTR Inter-chr p22.2 q44 Seq+ 19843 ChimerSeq STARFusion TCGA_RNA-Seq NF1-ACACA NF1 chr17 29422387 + ACACA chr17 35518964 - Exonic hg19 BRCA TCGA-E9-A1N6-01A 6 10 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene Seq+ 19844 ChimerSeq STARFusion TCGA_RNA-Seq NIN-FAM179B NIN chr14 51297182 - FAM179B chr14 45521639 + Exonic hg19 BRCA TCGA-E9-A1N6-01A 2 15 5'UTR-CDS Intra-chr q22.1 Oncogene Seq+ 19845 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-COL1A1 SEPT9 chr17 75471345 + COL1A1 chr17 48265510 - Exonic hg19 BRCA TCGA-E9-A1N6-01A 3 4 5'UTR-CDS Intra-chr q21.33 Oncogene 19846 ChimerSeq STARFusion TCGA_RNA-Seq ANK3-ATAD1 ANK3 chr10 62374944 - ATAD1 chr10 89574369 - Exonic hg19 BRCA TCGA-E9-A1N6-01A 3 2 CDS-5'UTR Intra-chr q21.2 Seq+ 19847 ChimerSeq STARFusion TCGA_RNA-Seq UBE2O-RNF213 UBE2O chr17 74448807 - RNF213 chr17 78332088 + Exonic hg19 BRCA TCGA-E9-A1N6-01A 2 6 Out-of-frame Intra-chr q25.1 q25.3 Oncogene Seq+ 19848 ChimerSeq STARFusion TCGA_RNA-Seq RNF216-ST14 RNF216 chr7 5751392 - ST14 chr11 130058009 + Exonic hg19 BRCA TCGA-B6-A0IM-01A 16 81 In-Frame Inter-chr p22.1 q24.3 Seq+ 19849 ChimerSeq STARFusion TCGA_RNA-Seq EDC3-SNX29 EDC3 chr15 74988221 - SNX29 chr16 12293458 + Exonic hg19 BRCA TCGA-B6-A0IM-01A 21 39 5'UTR-CDS Inter-chr q24.1 p13.13 Seq+ 19850 ChimerSeq STARFusion TCGA_RNA-Seq MYO9A-CRAMP1L MYO9A chr15 72338065 - CRAMP1L chr16 1682213 + Exonic hg19 BRCA TCGA-B6-A0IM-01A 2 25 In-Frame Inter-chr q23 Seq+ 19851 ChimerSeq STARFusion TCGA_RNA-Seq CHKA-PC CHKA chr11 67864486 - PC chr11 66639630 - Exonic hg19 BRCA TCGA-LL-A440-01A 3 42 CDS-5'UTR Intra-chr q13.2 q13.2 Seq+ 19852 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 BRCA TCGA-LL-A440-01A 2 2 CDS-5'UTR Intra-chr p12 p12 Transcription factor 19853 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-SSH2 PPP6R3 chr11 68321725 + SSH2 chr17 28030080 - Exonic hg19 BRCA TCGA-C8-A1HK-01A 32 84 In-Frame Inter-chr q13.2 q11.2 Seq+ 19854 ChimerSeq STARFusion TCGA_RNA-Seq ANO1-ABHD15 ANO1 chr11 70028792 + ABHD15 chr17 27890104 - Exonic hg19 BRCA TCGA-C8-A1HK-01A 17 49 In-Frame Inter-chr q13.3 q11.2 Seq+ 19855 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-SSH2 PPP6R3 chr11 68318654 + SSH2 chr17 28030080 - Exonic hg19 BRCA TCGA-C8-A1HK-01A 4 84 Out-of-frame Inter-chr q13.2 q11.2 Seq+ 19856 ChimerSeq STARFusion TCGA_RNA-Seq GLTSCR1L-CYB5R4 GLTSCR1L chr6 42790741 + CYB5R4 chr6 84644314 + Exonic hg19 BRCA TCGA-C8-A1HK-01A 6 14 Out-of-frame Intra-chr q14.2 Seq+ 19857 ChimerSeq STARFusion TCGA_RNA-Seq ZNF207-PPP6R3 ZNF207 chr17 30677371 + PPP6R3 chr11 68315535 + Exonic hg19 BRCA TCGA-C8-A1HK-01A 5 18 Out-of-frame Inter-chr q11.2 Transcription factor q13.2 Seq+ 19858 ChimerSeq STARFusion TCGA_RNA-Seq POLA2-PPFIA1 POLA2 chr11 65047097 + PPFIA1 chr11 70200407 + Exonic hg19 BRCA TCGA-C8-A1HK-01A 3 16 In-Frame Intra-chr q13.1 q13.3 Seq+ 19859 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-ERBB2 GRB7 chr17 37902253 + ERBB2 chr17 37883942 + Exonic hg19 BRCA TCGA-C8-A1HK-01A 2 2 Out-of-frame Intra-chr q12 q12 Oncogene Seq+ 19860 ChimerSeq STARFusion TCGA_RNA-Seq CHKA-SLC5A12 CHKA chr11 67864486 - SLC5A12 chr11 26734253 - Exonic hg19 BRCA TCGA-C8-A1HK-01A 2 0 In-Frame Intra-chr q13.2 p14.2 19861 ChimerSeq STARFusion TCGA_RNA-Seq UBE2G1-ANKFY1 UBE2G1 chr17 4192525 - ANKFY1 chr17 4077351 - Exonic hg19 BRCA TCGA-A1-A0SO-01A 53 64 In-Frame Intra-chr p13.2 p13.2 Seq+ 19862 ChimerSeq STARFusion TCGA_RNA-Seq RAD23A-CALR RAD23A chr19 13063667 + CALR chr19 13054351 + Exonic hg19 BRCA TCGA-A1-A0SO-01A 20 71 In-Frame Intra-chr p13.13 p13.13 Seq+ 19863 ChimerSeq STARFusion TCGA_RNA-Seq UBE2Q1-HPS1 UBE2Q1 chr1 154530703 - HPS1 chr10 100187021 - Exonic hg19 BRCA TCGA-A1-A0SO-01A 26 40 Out-of-frame Inter-chr q21.3 q24.2 Seq+ 19864 ChimerSeq STARFusion TCGA_RNA-Seq PDXDC1-NPIPA1 PDXDC1 chr16 15122823 + NPIPA1 chr16 15045472 + Exonic hg19 BRCA TCGA-A1-A0SO-01A 14 86 Out-of-frame Intra-chr p13.11 19865 ChimerSeq STARFusion TCGA_RNA-Seq PABPN1-BCL2L2 PABPN1 chr14 23792692 + BCL2L2 chr14 23780182 + Exonic hg19 BRCA TCGA-A1-A0SO-01A 16 70 CDS-3'UTR Intra-chr q11.2 q11.2 Oncogene Seq+ 19866 ChimerSeq STARFusion TCGA_RNA-Seq HPCAL1-CPSF3 HPCAL1 chr2 10537046 + CPSF3 chr2 9607836 + Exonic hg19 BRCA TCGA-A1-A0SO-01A 19 48 5'UTR-CDS Intra-chr p25.1 p25.1 Seq+ 19867 ChimerSeq STARFusion TCGA_RNA-Seq VPS53-HS3ST5 VPS53 chr17 600658 - HS3ST5 chr6 114489626 - Exonic hg19 BRCA TCGA-A1-A0SO-01A 12 37 CDS-5'UTR Inter-chr Tumor suppressor gene q22.1 Seq+ 19868 ChimerSeq STARFusion TCGA_RNA-Seq SACM1L-CXorf31 SACM1L chr3 45730989 + CXorf31 chrX 46754016 - Exonic hg19 BRCA TCGA-A1-A0SO-01A 15 14 CDS-3'UTR Inter-chr p21.31 Seq+ 19869 ChimerSeq STARFusion TCGA_RNA-Seq DIXDC1-GAB2 DIXDC1 chr11 111808283 + GAB2 chr11 77991947 - Exonic hg19 BRCA TCGA-A1-A0SO-01A 10 33 In-Frame Intra-chr q23.1 q14.1 Seq+ 19870 ChimerSeq STARFusion TCGA_RNA-Seq TRIP12-AGFG1 TRIP12 chr2 230786596 - AGFG1 chr2 228401617 + Exonic hg19 BRCA TCGA-A1-A0SO-01A 12 23 5'UTR-CDS Intra-chr q36.3 q36.3 Seq+ 19871 ChimerSeq STARFusion TCGA_RNA-Seq MTDH-LINC00669 MTDH chr8 98657115 + LINC00669 chr18 36788003 - Exonic hg19 BRCA TCGA-A1-A0SO-01A 11 11 Out-of-frame Inter-chr q22.1 19872 ChimerSeq STARFusion TCGA_RNA-Seq DIXDC1-GAB2 DIXDC1 chr11 111808283 + GAB2 chr11 78029265 - Exonic hg19 BRCA TCGA-A1-A0SO-01A 2 33 CDS-5'UTR Intra-chr q23.1 q14.1 Seq+ 19873 ChimerSeq STARFusion TCGA_RNA-Seq DIXDC1-GAB2 DIXDC1 chr11 111800634 + GAB2 chr11 77991947 - Exonic hg19 BRCA TCGA-A1-A0SO-01A 2 33 5'UTR-5'UTR Intra-chr q23.1 q14.1 Seq+ 19874 ChimerSeq STARFusion TCGA_RNA-Seq MTDH-LINC00669 MTDH chr8 98657115 + LINC00669 chr18 36788753 - Exonic hg19 BRCA TCGA-A1-A0SO-01A 6 11 Out-of-frame Inter-chr q22.1 19875 ChimerSeq STARFusion TCGA_RNA-Seq HDAC2-RSPO3 HDAC2 chr6 114292021 - RSPO3 chr6 127469793 + Exonic hg19 BRCA TCGA-A1-A0SO-01A 7 2 In-Frame Intra-chr q21 q22.33 Seq+ 19876 ChimerSeq STARFusion TCGA_RNA-Seq TRIP12-AGFG1 TRIP12 chr2 230786596 - AGFG1 chr2 228416675 + Exonic hg19 BRCA TCGA-A1-A0SO-01A 2 22 5'UTR-CDS Intra-chr q36.3 q36.3 Seq+ 19877 ChimerSeq STARFusion TCGA_RNA-Seq EVL-YY1 EVL chr14 100438394 + YY1 chr14 100728641 + Exonic hg19 BRCA TCGA-A1-A0SO-01A 6 4 5'UTR-CDS Intra-chr q32.2 q32.2 Transcription factor 19878 ChimerSeq STARFusion TCGA_RNA-Seq GDF11-BLOC1S1 GDF11 chr12 56137545 + BLOC1S1 chr12 56112875 + Exonic hg19 BRCA TCGA-A1-A0SO-01A 4 12 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 19879 ChimerSeq STARFusion TCGA_RNA-Seq SACM1L-CXorf31 SACM1L chr3 45730989 + CXorf31 chrX 46749814 - Exonic hg19 BRCA TCGA-A1-A0SO-01A 3 14 CDS-3'UTR Inter-chr p21.31 Seq+ 19880 ChimerSeq STARFusion TCGA_RNA-Seq CDC42BPB-UNC79 CDC42BPB chr14 103523336 - UNC79 chr14 93934017 + Exonic hg19 BRCA TCGA-A1-A0SO-01A 2 8 CDS-5'UTR Intra-chr q32.32 Seq+ 19881 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A3-PPAP2C SLC39A3 chr19 2737046 - PPAP2C chr19 288171 - Exonic hg19 BRCA TCGA-A7-A13E-01A 25 138 Out-of-frame Intra-chr p13.3 Seq+ 19882 ChimerSeq STARFusion TCGA_RNA-Seq KDM4B-C19orf44 KDM4B chr19 5016350 + C19orf44 chr19 16611603 + Exonic hg19 BRCA TCGA-A7-A13E-01A 11 41 5'UTR-5'UTR Intra-chr p13.3 p13.11 Seq+ 19883 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-SHANK2 FCHSD2 chr11 72851076 - SHANK2 chr11 70338570 - Exonic hg19 BRCA TCGA-B6-A0RL-01A 33 110 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 19884 ChimerSeq STARFusion TCGA_RNA-Seq EPS15L1-ZNF675 EPS15L1 chr19 16524584 - ZNF675 chr19 23757034 - Exonic hg19 BRCA TCGA-B6-A0RL-01A 10 16 3'UTR-3'UTR Intra-chr p13.11 p12 Transcription factor Seq+ 19885 ChimerSeq STARFusion TCGA_RNA-Seq EPS15L1-ZNF675 EPS15L1 chr19 16524584 - ZNF675 chr19 23710816 - Exonic hg19 BRCA TCGA-B6-A0RL-01A 5 16 3'UTR-3'UTR Intra-chr p13.11 p12 Transcription factor Seq+ 19886 ChimerSeq STARFusion TCGA_RNA-Seq TPCN2-RAB11FIP1 TPCN2 chr11 68831435 + RAB11FIP1 chr8 37720631 - Exonic hg19 BRCA TCGA-B6-A0RL-01A 2 17 In-Frame Inter-chr q13.3 p11.23 Seq+ 19887 ChimerSeq STARFusion TCGA_RNA-Seq CLPB-C2CD3 CLPB chr11 72040751 - C2CD3 chr11 73817538 - Exonic hg19 BRCA TCGA-B6-A0RL-01A 3 6 In-Frame Intra-chr q13.4 q13.4 Seq+ 19888 ChimerSeq STARFusion TCGA_RNA-Seq PPME1-AQP11 PPME1 chr11 73915490 + AQP11 chr11 77320343 + Exonic hg19 BRCA TCGA-B6-A0RL-01A 3 6 Out-of-frame Intra-chr q13.4 q14.1 Seq+ 19889 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-RSF1 WHSC1L1 chr8 38194823 - RSF1 chr11 77402283 - Exonic hg19 BRCA TCGA-B6-A0RL-01A 2 7 Out-of-frame Inter-chr p11.23 Tumor suppressor gene q14.1 19890 ChimerSeq STARFusion TCGA_RNA-Seq ZNF207-C17orf75 ZNF207 chr17 30678931 + C17orf75 chr17 30661858 - Exonic hg19 BRCA TCGA-B6-A1KN-01A 136 383 In-Frame Intra-chr q11.2 Transcription factor q11.2 Seq+ 19891 ChimerSeq STARFusion TCGA_RNA-Seq RARA-IGFBP4 RARA chr17 38487648 + IGFBP4 chr17 38609237 + Exonic hg19 BRCA TCGA-B6-A1KN-01A 6 33 In-Frame Intra-chr q21.2 Oncogene Transcription factor q21.2 Tumor suppressor gene Seq+ 19892 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D25-ERLIN2 TBC1D25 chrX 48403411 + ERLIN2 chr8 37607077 + Exonic hg19 BRCA TCGA-B6-A1KN-01A 10 16 In-Frame Inter-chr p11.23 p11.23 Seq+ 19893 ChimerSeq STARFusion TCGA_RNA-Seq CCDC57-DIAPH2 CCDC57 chr17 80130514 - DIAPH2 chrX 96327940 + Exonic hg19 BRCA TCGA-B6-A1KN-01A 3 22 In-Frame Inter-chr q25.3 q21.33 Seq+ 19894 ChimerSeq STARFusion TCGA_RNA-Seq CTAGE5-TRAPPC6B CTAGE5 chr14 39818181 + TRAPPC6B chr14 39628754 - Exonic hg19 BRCA TCGA-B6-A1KN-01A 4 15 Out-of-frame Intra-chr q21.1 q21.1 19895 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-ASUN FBXL20 chr17 37459838 - ASUN chr12 27078784 - Exonic hg19 BRCA TCGA-B6-A1KN-01A 3 18 Out-of-frame Inter-chr q12 19896 ChimerSeq STARFusion TCGA_RNA-Seq ITPR2-PSMB3 ITPR2 chr12 26540367 - PSMB3 chr17 36916684 + Exonic hg19 BRCA TCGA-B6-A1KN-01A 4 5 Out-of-frame Inter-chr p11.23 19897 ChimerSeq STARFusion TCGA_RNA-Seq MYO9B-PNN MYO9B chr19 17273932 + PNN chr14 39645731 + Exonic hg19 BRCA TCGA-B6-A1KN-01A 3 9 Out-of-frame Inter-chr p13.11 q21.1 Tumor suppressor gene Seq+ 19898 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-CD163L1 FBXL20 chr17 37499433 - CD163L1 chr12 7559448 - Exonic hg19 BRCA TCGA-B6-A1KN-01A 3 8 Out-of-frame Inter-chr q12 p13.31 Seq+ 19899 ChimerSeq STARFusion TCGA_RNA-Seq TUBGCP5-CYFIP1 TUBGCP5 chr15 22855295 + CYFIP1 chr15 22969163 + Exonic hg19 BRCA TCGA-B6-A1KN-01A 3 3 Out-of-frame Intra-chr q11.2 q11.2 19900 ChimerSeq STARFusion TCGA_RNA-Seq MGP-SERF2 MGP chr12 15034891 - SERF2 chr15 44069647 + Exonic hg19 BRCA TCGA-B6-A1KN-01A 3 1 Out-of-frame Inter-chr p12.3 q15.3 19901 ChimerSeq STARFusion TCGA_RNA-Seq EIF3E-RPL30 EIF3E chr8 109260842 - RPL30 chr8 99055003 - Exonic hg19 BRCA TCGA-B6-A1KN-01A 2 1 Out-of-frame Intra-chr q23.1 q22.2 19902 ChimerSeq STARFusion TCGA_RNA-Seq UBE3C-PTPRN2 UBE3C chr7 157000629 + PTPRN2 chr7 157475629 - Exonic hg19 BRCA TCGA-B6-A1KN-01A 2 0 In-Frame Intra-chr q36.3 q36.3 Seq+ 19903 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-USP13 TBL1XR1 chr3 176763917 - USP13 chr3 179478900 + Exonic hg19 BRCA TCGA-A8-A07G-01A 24 475 In-Frame Intra-chr q26.32 q26.33 Seq+ 19904 ChimerSeq STARFusion TCGA_RNA-Seq RPS19-DMRTC2 RPS19 chr19 42365281 + DMRTC2 chr19 42354594 + Exonic hg19 BRCA TCGA-A8-A07G-01A 50 261 Out-of-frame Intra-chr q13.2 q13.2 Transcription factor Seq+ 19905 ChimerSeq STARFusion TCGA_RNA-Seq RPS19-DMRTC2 RPS19 chr19 42365281 + DMRTC2 chr19 42354380 + Exonic hg19 BRCA TCGA-A8-A07G-01A 26 261 Out-of-frame Intra-chr q13.2 q13.2 Transcription factor Seq+ 19906 ChimerSeq STARFusion TCGA_RNA-Seq RPRD1A-SLC39A6 RPRD1A chr18 33647217 - SLC39A6 chr18 33706979 - Exonic hg19 BRCA TCGA-A8-A07G-01A 7 24 CDS-5'UTR Intra-chr q12.2 q12.2 Seq+ 19907 ChimerSeq STARFusion TCGA_RNA-Seq UBE3A-CYP19A1 UBE3A chr15 25650608 - CYP19A1 chr15 51535147 - Exonic hg19 BRCA TCGA-A8-A07G-01A 7 13 CDS-5'UTR Intra-chr q11.2 q21.2 Seq+ 19908 ChimerSeq STARFusion TCGA_RNA-Seq CPSF3L-MXRA8 CPSF3L chr1 1255836 - MXRA8 chr1 1289612 - Exonic hg19 BRCA TCGA-A8-A07G-01A 6 15 Out-of-frame Intra-chr p36.33 Seq+ 19909 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-THEGL ZFAND3 chr6 37897775 + THEGL chr4 57414956 + Exonic hg19 BRCA TCGA-A8-A07G-01A 2 8 In-Frame Inter-chr p21.2 q12 Seq+ 19910 ChimerSeq STARFusion TCGA_RNA-Seq NAA15-PAPSS1 NAA15 chr4 140222985 + PAPSS1 chr4 108553016 - Exonic hg19 BRCA TCGA-A8-A07G-01A 2 1 In-Frame Intra-chr q31.1 q25 19911 ChimerSeq STARFusion TCGA_RNA-Seq PDHX-KDM6A PDHX chr11 34938362 + KDM6A chrX 44966655 + Exonic hg19 BRCA TCGA-BH-A0BF-01A 6 28 Out-of-frame Inter-chr p13 p11.3 Oncogene Tumor suppressor gene Seq+ 19912 ChimerSeq STARFusion TCGA_RNA-Seq COX20-SDCCAG8 COX20 chr1 245005560 + SDCCAG8 chr1 243504341 + Exonic hg19 BRCA TCGA-BH-A0BF-01A 3 29 Out-of-frame Intra-chr q44 Seq+ 19913 ChimerSeq STARFusion TCGA_RNA-Seq EPHA4-LOC440900 EPHA4 chr2 222428451 - LOC440900 chr2 114764596 + Exonic hg19 BRCA TCGA-BH-A0BF-01A 2 0 CDS-5'UTR Intra-chr q36.1 19914 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R1-DPRX PPP6R1 chr19 55769803 - DPRX chr19 54135316 + Exonic hg19 BRCA TCGA-AO-A12C-01A 6 14 5'UTR-5'UTR Intra-chr q13.42 q13.42 Transcription factor Seq+ 19915 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-KRT35 GRB7 chr17 37894645 + KRT35 chr17 39637007 - Exonic hg19 BRCA TCGA-AO-A12C-01A 3 5 5'UTR-CDS Intra-chr q12 q21.2 19916 ChimerSeq STARFusion TCGA_RNA-Seq VMP1-SMARCD2 VMP1 chr17 57808883 + SMARCD2 chr17 61910351 - Exonic hg19 BRCA TCGA-AO-A12C-01A 2 3 Out-of-frame Intra-chr q23.1 q23.3 Seq+ 19917 ChimerSeq STARFusion TCGA_RNA-Seq BMPR1B-PDLIM5 BMPR1B chr4 95679219 + PDLIM5 chr4 95494502 + Exonic hg19 BRCA TCGA-AO-A12C-01A 2 1 5'UTR-5'UTR Intra-chr q22.3 TKL:STKR q22.3 Seq+ 19918 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1841-IKBKB KIAA1841 chr2 61315603 + IKBKB chr8 42188432 + Exonic hg19 BRCA TCGA-AO-A12C-01A 2 0 Out-of-frame Inter-chr p15 p11.21 Oncogene 19919 ChimerSeq STARFusion TCGA_RNA-Seq FAM167A-CHGB FAM167A chr8 11279970 - CHGB chr20 5902981 + Exonic hg19 BRCA TCGA-D8-A1XV-01A 7 1 3'UTR-CDS Inter-chr p23.1 p12.3 19920 ChimerSeq STARFusion TCGA_RNA-Seq PIP4K2B-SHANK2 PIP4K2B chr17 36933940 - SHANK2 chr11 70742672 - Exonic hg19 BRCA TCGA-AC-A2FB-01A 53 126 In-Frame Inter-chr q12 q13.4 Seq+ 19921 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-LAYN KANSL1 chr17_ctg5_hap1 740072 + LAYN chr11 111414648 + Exonic hg19 BRCA TCGA-AC-A2FB-01A 26 33 3'UTR-CDS Inter-chr q23.1 Seq+ 19922 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-LAYN KANSL1 chr17 44127899 - LAYN chr11 111414648 + Exonic hg19 BRCA TCGA-AC-A2FB-01A 12 14 In-Frame Inter-chr q23.1 Seq+ 19923 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-ANO1 SSH2 chr17 28256956 - ANO1 chr11 69957813 + Exonic hg19 BRCA TCGA-AC-A2FB-01A 6 21 Out-of-frame Inter-chr q11.2 q13.3 Seq+ 19924 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-ANO1 SSH2 chr17 28256956 - ANO1 chr11 69962564 + Exonic hg19 BRCA TCGA-AC-A2FB-01A 3 21 In-Frame Inter-chr q11.2 q13.3 Seq+ 19925 ChimerSeq STARFusion TCGA_RNA-Seq DBF4B-DYNC2H1 DBF4B chr17 42786734 + DYNC2H1 chr11 103036627 + Exonic hg19 BRCA TCGA-AC-A2FB-01A 6 6 Out-of-frame Inter-chr q21.31 q22.3 Seq+ 19926 ChimerSeq STARFusion TCGA_RNA-Seq PIP4K2B-SLC6A4 PIP4K2B chr17 36943076 - SLC6A4 chr17 28549933 - Exonic hg19 BRCA TCGA-AC-A2FB-01A 3 11 CDS-3'UTR Intra-chr q12 q11.2 Seq+ 19927 ChimerSeq STARFusion TCGA_RNA-Seq THRA-GOSR1 THRA chr17 38233191 + GOSR1 chr17 28817144 + Exonic hg19 BRCA TCGA-AC-A2FB-01A 2 6 Out-of-frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q11.2 Seq+ 19928 ChimerSeq STARFusion TCGA_RNA-Seq PGAP3-BPTF PGAP3 chr17 37842175 - BPTF chr17 65978368 + Exonic hg19 BRCA TCGA-AC-A2FB-01A 2 5 Out-of-frame Intra-chr q12 Oncogene q24.2 Transcription factor Seq+ 19929 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-NARS2 ERBB2 chr17 37866734 + NARS2 chr11 78147860 - Exonic hg19 BRCA TCGA-BH-A1EN-01A 392 1940 Out-of-frame Inter-chr q12 Oncogene q14.1 Seq+ 19930 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-NARS2 ERBB2 chr17 37866134 + NARS2 chr11 78147860 - Exonic hg19 BRCA TCGA-BH-A1EN-01A 102 1940 Out-of-frame Inter-chr q12 Oncogene q14.1 Seq+ 19931 ChimerSeq STARFusion TCGA_RNA-Seq EXT1-RSF1 EXT1 chr8 118825111 - RSF1 chr11 77451981 - Exonic hg19 BRCA TCGA-BH-A1EN-01A 11 33 In-Frame Inter-chr q24.11 Oncogene Tumor suppressor gene q14.1 Seq+ 19932 ChimerSeq STARFusion TCGA_RNA-Seq GAB2-ALG8 GAB2 chr11 78128692 - ALG8 chr11 77838482 - Exonic hg19 BRCA TCGA-BH-A1EN-01A 11 27 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 19933 ChimerSeq STARFusion TCGA_RNA-Seq CACNB1-C11orf30 CACNB1 chr17 37343732 - C11orf30 chr11 76207259 + Exonic hg19 BRCA TCGA-BH-A1EN-01A 5 42 Out-of-frame Inter-chr q12 Seq+ 19934 ChimerSeq STARFusion TCGA_RNA-Seq TENM4-RBM4 TENM4 chr11 78775783 - RBM4 chr11 66433327 + Exonic hg19 BRCA TCGA-BH-A1EN-01A 6 24 Out-of-frame Intra-chr q14.1 q13.2 Tumor suppressor gene Seq+ 19935 ChimerSeq STARFusion TCGA_RNA-Seq PC-THRSP PC chr11 66719901 - THRSP chr11 77778705 + Exonic hg19 BRCA TCGA-BH-A1EN-01A 2 19 5'UTR-3'UTR Intra-chr q13.2 q14.1 Seq+ 19936 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-ACTN3 GRB7 chr17 37902455 + ACTN3 chr11 66318710 + Exonic hg19 BRCA TCGA-BH-A1EN-01A 3 11 In-Frame Inter-chr q12 q13.2 Seq+ 19937 ChimerSeq STARFusion TCGA_RNA-Seq KCTD21-TENM4 KCTD21 chr11 77899619 - TENM4 chr11 78776052 - Exonic hg19 BRCA TCGA-BH-A1EN-01A 3 7 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 19938 ChimerSeq STARFusion TCGA_RNA-Seq ACER3-PC ACER3 chr11 76670075 + PC chr11 66620854 - Exonic hg19 BRCA TCGA-BH-A1EN-01A 2 10 In-Frame Intra-chr q13.5 q13.2 Seq+ 19939 ChimerSeq STARFusion TCGA_RNA-Seq SSR1-CAGE1 SSR1 chr6 7301543 - CAGE1 chr6 7330121 - Exonic hg19 BRCA TCGA-A2-A0CX-01A 667 2518 Out-of-frame Intra-chr p24.3 p24.3 Seq+ 19940 ChimerSeq STARFusion TCGA_RNA-Seq NPEPPS-ARL17B NPEPPS chr17 45677105 + ARL17B chr17 44377031 - Exonic hg19 BRCA TCGA-A2-A0CX-01A 10 104 In-Frame Intra-chr q21.32 19941 ChimerSeq STARFusion TCGA_RNA-Seq PSMD3-C17orf96 PSMD3 chr17 38142965 + C17orf96 chr17 36829504 - Exonic hg19 BRCA TCGA-A2-A0CX-01A 8 42 CDS-3'UTR Intra-chr q21.1 19942 ChimerSeq STARFusion TCGA_RNA-Seq HIVEP1-OFCC1 HIVEP1 chr6 12009108 + OFCC1 chr6 10159732 - Exonic hg19 BRCA TCGA-A2-A0CX-01A 15 13 Out-of-frame Intra-chr p24.1 Tumor suppressor gene Transcription factor p24.3 Seq+ 19943 ChimerSeq STARFusion TCGA_RNA-Seq SEC16A-LHX3 SEC16A chr9 139362867 - LHX3 chr9 139092599 - Exonic hg19 BRCA TCGA-A2-A0CX-01A 6 47 In-Frame Intra-chr q34.3 q34.3 Transcription factor Seq+ 19944 ChimerSeq STARFusion TCGA_RNA-Seq CACNA2D3-FOXP1 CACNA2D3 chr3 54798378 + FOXP1 chr3 71050210 - Exonic hg19 BRCA TCGA-A2-A0CX-01A 11 18 Out-of-frame Intra-chr p21.1 Tumor suppressor gene p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 19945 ChimerSeq STARFusion TCGA_RNA-Seq NPEPPS-ARL17B NPEPPS chr17 45677105 + ARL17B chr17 44388641 - Exonic hg19 BRCA TCGA-A2-A0CX-01A 9 23 CDS-3'UTR Intra-chr q21.32 19946 ChimerSeq STARFusion TCGA_RNA-Seq FAM19A4-CACNA2D3 FAM19A4 chr3 68981391 - CACNA2D3 chr3 54786626 + Exonic hg19 BRCA TCGA-A2-A0CX-01A 5 13 5'UTR-CDS Intra-chr p14.1 p21.1 Tumor suppressor gene Seq+ 19947 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-PRPF8 YWHAE chr17 1303341 - PRPF8 chr17 1585587 - Exonic hg19 BRCA TCGA-A2-A0CX-01A 5 6 Out-of-frame Intra-chr p13.3 19948 ChimerSeq STARFusion TCGA_RNA-Seq CACNA2D3-FOXP1 CACNA2D3 chr3 54798378 + FOXP1 chr3 71037228 - Exonic hg19 BRCA TCGA-A2-A0CX-01A 2 17 In-Frame Intra-chr p21.1 Tumor suppressor gene p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 19949 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-ITGB3 GRB7 chr17 37900460 + ITGB3 chr17 45351785 + Exonic hg19 BRCA TCGA-A2-A0CX-01A 3 10 Out-of-frame Intra-chr q12 q21.32 Oncogene Tumor suppressor gene Seq+ 19950 ChimerSeq STARFusion TCGA_RNA-Seq PRR11-IKZF3 PRR11 chr17 57247241 + IKZF3 chr17 37921401 - Exonic hg19 BRCA TCGA-A2-A0CX-01A 3 10 CDS-3'UTR Intra-chr q22 q21.1 Tumor suppressor gene Transcription factor Seq+ 19951 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-ITGB3 GRB7 chr17 37900460 + ITGB3 chr17 45351785 + Exonic hg19 BRCA TCGA-A2-A0CX-01A 3 9 Out-of-frame Intra-chr q12 q21.32 Oncogene Tumor suppressor gene Seq+ 19952 ChimerSeq STARFusion TCGA_RNA-Seq RIMKLB-CLEC4D RIMKLB chr12 8866637 + CLEC4D chr12 8667832 + Exonic hg19 BRCA TCGA-A2-A0CX-01A 4 4 In-Frame Intra-chr p13.31 p13.31 Seq+ 19953 ChimerSeq STARFusion TCGA_RNA-Seq KIF13A-TPMT KIF13A chr6 17987285 - TPMT chr6 18134120 - Exonic hg19 BRCA TCGA-A2-A0CX-01A 3 6 In-Frame Intra-chr p22.3 p22.3 Seq+ 19954 ChimerSeq STARFusion TCGA_RNA-Seq MANF-SETD2 MANF chr3 51423766 + SETD2 chr3 47108608 - Exonic hg19 BRCA TCGA-A2-A3KC-01A 16 44 In-Frame Intra-chr p21.2 p21.31 Oncogene Tumor suppressor gene Seq+ 19955 ChimerSeq STARFusion TCGA_RNA-Seq RPS3-TSKU RPS3 chr11 75113490 + TSKU chr11 76506653 + Exonic hg19 BRCA TCGA-A2-A3KC-01A 13 50 CDS-5'UTR Intra-chr q13.4 q13.5 Seq+ 19956 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-HSD3B2 PPFIA1 chr11 70194526 + HSD3B2 chr1 119957954 + Exonic hg19 BRCA TCGA-A2-A3KC-01A 4 46 5'UTR-5'UTR Inter-chr q13.3 p12 Seq+ 19957 ChimerSeq STARFusion TCGA_RNA-Seq KLHL18-TEX264 KLHL18 chr3 47324584 + TEX264 chr3 51718429 + Exonic hg19 BRCA TCGA-A2-A3KC-01A 3 26 In-Frame Intra-chr p21.31 p21.2 Seq+ 19958 ChimerSeq STARFusion TCGA_RNA-Seq ARRB1-GAB2 ARRB1 chr11 75062632 - GAB2 chr11 77991947 - Exonic hg19 BRCA TCGA-A2-A3KC-01A 4 9 Out-of-frame Intra-chr q13.4 q14.1 Seq+ 19959 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF17-COA4 ARHGEF17 chr11 73022875 + COA4 chr11 73584439 - Exonic hg19 BRCA TCGA-A2-A3KC-01A 2 10 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 19960 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 BRCA TCGA-A2-A3KC-01A 2 2 CDS-5'UTR Intra-chr p12 p12 Transcription factor 19961 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 BRCA TCGA-A8-A0AB-01A 21 89 In-Frame Intra-chr p13.3 p13.3 19962 ChimerSeq STARFusion TCGA_RNA-Seq RNF167-PIGL RNF167 chr17 4844452 + PIGL chr17 16203202 + Exonic hg19 BRCA TCGA-A8-A0AB-01A 12 34 Out-of-frame Intra-chr p13.2 p11.2 Seq+ 19963 ChimerSeq STARFusion TCGA_RNA-Seq RNF167-PIGL RNF167 chr17 4843525 + PIGL chr17 16203202 + Exonic hg19 BRCA TCGA-A8-A0AB-01A 4 34 5'UTR-CDS Intra-chr p13.2 p11.2 Seq+ 19964 ChimerSeq STARFusion TCGA_RNA-Seq RNF167-PIGL RNF167 chr17 4844452 + PIGL chr17 16187335 + Exonic hg19 BRCA TCGA-A8-A0AB-01A 3 34 Out-of-frame Intra-chr p13.2 p11.2 Seq+ 19965 ChimerSeq STARFusion TCGA_RNA-Seq PNPLA6-ECSIT PNPLA6 chr19 7599125 + ECSIT chr19 11618863 - Exonic hg19 BRCA TCGA-A7-A56D-01A 5 41 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 19966 ChimerSeq STARFusion TCGA_RNA-Seq NDFIP1-NDUFAF2 NDFIP1 chr5 141524241 + NDUFAF2 chr5 60448531 + Exonic hg19 BRCA TCGA-A7-A56D-01A 5 39 3'UTR-CDS Intra-chr q31.3 q12.1 Seq+ 19967 ChimerSeq STARFusion TCGA_RNA-Seq CCM2-PDHA1 CCM2 chr7 45039962 + PDHA1 chrX 19375770 + Exonic hg19 BRCA TCGA-A7-A56D-01A 4 15 In-Frame Inter-chr p13 p22.12 Seq+ 19968 ChimerSeq STARFusion TCGA_RNA-Seq GDPD1-SMG8 GDPD1 chr17 57298112 + SMG8 chr17 57292166 + Exonic hg19 BRCA TCGA-A7-A56D-01A 5 8 Out-of-frame Intra-chr q22 q22 Seq+ 19969 ChimerSeq STARFusion TCGA_RNA-Seq CCM2-PDHA1 CCM2 chr7 45039456 + PDHA1 chrX 19375770 + Exonic hg19 BRCA TCGA-A7-A56D-01A 3 15 5'UTR-CDS Inter-chr p13 p22.12 Seq+ 19970 ChimerSeq STARFusion TCGA_RNA-Seq PRKAG2-CCDC132 PRKAG2 chr7 151573592 - CCDC132 chr7 92970739 + Exonic hg19 BRCA TCGA-B6-A2IU-01A 10 14 In-Frame Intra-chr q36.1 Seq+ 19971 ChimerSeq STARFusion TCGA_RNA-Seq QSER1-GAS2 QSER1 chr11 32914880 + GAS2 chr11 22747838 + Exonic hg19 BRCA TCGA-B6-A0WT-01A 4 12 5'UTR-CDS Intra-chr p13 p14.3 Seq+ 19972 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-ASPH ESR1 chr6 152201906 + ASPH chr8 62416068 - Exonic hg19 BRCA TCGA-A2-A3KD-01A 162 723 Out-of-frame Inter-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q12.3 Seq+ 19973 ChimerSeq STARFusion TCGA_RNA-Seq ASPH-RSF1 ASPH chr8 62430087 - RSF1 chr11 77413540 - Exonic hg19 BRCA TCGA-A2-A3KD-01A 12 15 Out-of-frame Inter-chr q12.3 q14.1 Seq+ 19974 ChimerSeq STARFusion TCGA_RNA-Seq CADPS2-WASL CADPS2 chr7 122377009 - WASL chr7 123349277 - Exonic hg19 BRCA TCGA-A2-A3KD-01A 2 0 In-Frame Intra-chr q31.32 q31.32 19975 ChimerSeq STARFusion TCGA_RNA-Seq COL1A2-ACTB COL1A2 chr7 94039750 + ACTB chr7 5567316 - Exonic hg19 BRCA TCGA-AO-A0J9-01A 3 1 Out-of-frame Intra-chr q21.3 p22.1 19976 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-COX6C VPS13B chr8 100866484 + COX6C chr8 100899846 - Exonic hg19 BRCA TCGA-AO-A0J9-01A 2 0 Out-of-frame Intra-chr q22.2 q22.2 19977 ChimerSeq STARFusion TCGA_RNA-Seq DNMT1-OLFM2 DNMT1 chr19 10341880 - OLFM2 chr19 9971470 - Exonic hg19 BRCA TCGA-B6-A0WY-01A 6 4 5'UTR-CDS Intra-chr p13.2 Oncogene Tumor suppressor gene Transcription factor p13.2 Seq+ 19978 ChimerSeq STARFusion TCGA_RNA-Seq S1PR2-OLFM2 S1PR2 chr19 10341880 - OLFM2 chr19 9971470 - Exonic hg19 BRCA TCGA-B6-A0WY-01A 6 4 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 19979 ChimerSeq STARFusion TCGA_RNA-Seq DIP2A-PRR4 DIP2A chr21 47910632 + PRR4 chr12 11001006 - Exonic hg19 BRCA TCGA-AO-A0J2-01A 8 373 In-Frame Inter-chr q22.3 Seq+ 19980 ChimerSeq STARFusion TCGA_RNA-Seq QARS-USP19 QARS chr3 49135625 - USP19 chr3 49150062 - Exonic hg19 BRCA TCGA-AO-A0J2-01A 39 131 In-Frame Intra-chr p21.31 p21.31 Seq+ 19981 ChimerSeq STARFusion TCGA_RNA-Seq FDFT1-NEIL2 FDFT1 chr8 11660440 + NEIL2 chr8 11640712 + Exonic hg19 BRCA TCGA-AO-A0J2-01A 17 44 Out-of-frame Intra-chr p23.1 p23.1 Seq+ 19982 ChimerSeq STARFusion TCGA_RNA-Seq FDFT1-NEIL2 FDFT1 chr8 11660440 + NEIL2 chr8 11643472 + Exonic hg19 BRCA TCGA-AO-A0J2-01A 2 44 Out-of-frame Intra-chr p23.1 p23.1 Seq+ 19983 ChimerSeq STARFusion TCGA_RNA-Seq B4GALNT3-CCDC77 B4GALNT3 chr12 569711 + CCDC77 chr12 527660 + Exonic hg19 BRCA TCGA-AO-A0J2-01A 8 7 Out-of-frame Intra-chr p13.33 p13.33 Seq+ 19984 ChimerSeq STARFusion TCGA_RNA-Seq ZC3HAV1-ITPKB ZC3HAV1 chr7 138749625 - ITPKB chr1 226836472 - Exonic hg19 BRCA TCGA-AO-A0J2-01A 5 12 Out-of-frame Inter-chr q34 q42.12 Seq+ 19985 ChimerSeq STARFusion TCGA_RNA-Seq ZNF292-FIG4 ZNF292 chr6 87865477 + FIG4 chr6 110098125 + Exonic hg19 BRCA TCGA-AO-A0J2-01A 3 19 Out-of-frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q21 Seq+ 19986 ChimerSeq STARFusion TCGA_RNA-Seq ZNF292-FIG4 ZNF292 chr6 87865477 + FIG4 chr6 110106173 + Exonic hg19 BRCA TCGA-AO-A0J2-01A 2 19 Out-of-frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q21 Seq+ 19987 ChimerSeq STARFusion TCGA_RNA-Seq ZNF292-FIG4 ZNF292 chr6 87865477 + FIG4 chr6 110113785 + Exonic hg19 BRCA TCGA-AO-A0J2-01A 2 19 In-Frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q21 Seq+ 19988 ChimerSeq STARFusion TCGA_RNA-Seq ITPKB-ZC3HAV1 ITPKB chr1 226923228 - ZC3HAV1 chr7 138749745 - Exonic hg19 BRCA TCGA-AO-A0J2-01A 4 10 In-Frame Inter-chr q42.12 q34 Seq+ 19989 ChimerSeq STARFusion TCGA_RNA-Seq TMEM87B-MERTK TMEM87B chr2 112813333 + MERTK chr2 112785928 + Exonic hg19 BRCA TCGA-AO-A0J2-01A 4 8 Out-of-frame Intra-chr q13 q13 Seq+ 19990 ChimerSeq STARFusion TCGA_RNA-Seq DIP2A-PRH1 DIP2A chr21 47910632 + PRH1 chr12 11033655 - Exonic hg19 BRCA TCGA-AO-A0J2-01A 2 15 CDS-3'UTR Inter-chr q22.3 Seq+ 19991 ChimerSeq STARFusion TCGA_RNA-Seq EVC-MGST1 EVC chr4 5785491 + MGST1 chr12 16507165 + Exonic hg19 BRCA TCGA-AO-A0J2-01A 2 12 CDS-5'UTR Inter-chr p16.2 p12.3 Seq+ 19992 ChimerSeq STARFusion TCGA_RNA-Seq ZMYND8-SULF2 ZMYND8 chr20 45912315 - SULF2 chr20 46365686 - Exonic hg19 BRCA TCGA-AO-A0J2-01A 4 4 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 19993 ChimerSeq STARFusion TCGA_RNA-Seq ADD1-SH3BP2 ADD1 chr4 2845751 + SH3BP2 chr4 2826340 + Exonic hg19 BRCA TCGA-AO-A0J2-01A 3 7 5'UTR-CDS Intra-chr p16.3 p16.3 Seq+ 19994 ChimerSeq STARFusion TCGA_RNA-Seq B4GALNT3-CCDC77 B4GALNT3 chr12 569711 + CCDC77 chr12 520913 + Exonic hg19 BRCA TCGA-AO-A0J2-01A 2 7 Out-of-frame Intra-chr p13.33 p13.33 Seq+ 19995 ChimerSeq STARFusion TCGA_RNA-Seq SPO11-GSTA1 SPO11 chr20 55910963 + GSTA1 chr6 52657785 - Exonic hg19 BRCA TCGA-3C-AALJ-01A 4 27 In-Frame Inter-chr q13.31 p12.2 Seq+ 19996 ChimerSeq STARFusion TCGA_RNA-Seq RBM38-DNAJC5B RBM38 chr20 55968389 + DNAJC5B chr8 66988895 + Exonic hg19 BRCA TCGA-3C-AALJ-01A 3 9 In-Frame Inter-chr q13.31 Tumor suppressor gene q13.1 Seq+ 19997 ChimerSeq STARFusion TCGA_RNA-Seq CSE1L-LETM2 CSE1L chr20 47662960 + LETM2 chr8 38245468 + Exonic hg19 BRCA TCGA-3C-AALJ-01A 3 7 5'UTR-5'UTR Inter-chr q13.13 p11.23 Seq+ 19998 ChimerSeq STARFusion TCGA_RNA-Seq SARNP-BLOC1S1 SARNP chr12 56182859 - BLOC1S1 chr12 56112875 + Exonic hg19 BRCA TCGA-3C-AALJ-01A 4 1 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 19999 ChimerSeq STARFusion TCGA_RNA-Seq TTPA-SNX11 TTPA chr8 63998377 - SNX11 chr17 46189393 + Exonic hg19 BRCA TCGA-3C-AALJ-01A 3 1 CDS-5'UTR Inter-chr q12.3 q21.32 Seq+ 20000 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-PPP6R3 KDM2A chr11 66888829 + PPP6R3 chr11 68363565 + Exonic hg19 BRCA TCGA-AO-A0J3-01A 56 86 Out-of-frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 20001 ChimerSeq STARFusion TCGA_RNA-Seq CCT3-SYT2 CCT3 chr1 156303338 - SYT2 chr1 202574917 - Exonic hg19 BRCA TCGA-AO-A0J3-01A 22 87 CDS-5'UTR Intra-chr q22 q32.1 Seq+ 20002 ChimerSeq STARFusion TCGA_RNA-Seq ELN-METTL2A ELN chr7 73442599 + METTL2A chr17 60517978 + Exonic hg19 BRCA TCGA-AO-A0J3-01A 5 23 Out-of-frame Inter-chr q11.23 q23.2 Seq+ 20003 ChimerSeq STARFusion TCGA_RNA-Seq NOS1AP-GLT25D2 NOS1AP chr1 162124266 + GLT25D2 chr1 183913457 - Exonic hg19 BRCA TCGA-AO-A0J3-01A 3 7 In-Frame Intra-chr q23.3 Seq+ 20004 ChimerSeq STARFusion TCGA_RNA-Seq SLCO1B1-IAPP SLCO1B1 chr12 21377773 + IAPP chr12 21526271 + Exonic hg19 BRCA TCGA-AO-A0J3-01A 4 2 CDS-5'UTR Intra-chr p12.1 p12.1 Seq+ 20005 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-COX6C PTPN12 chr7 77166843 + COX6C chr8 100904281 - Exonic hg19 BRCA TCGA-AO-A0J3-01A 4 1 Out-of-frame Inter-chr q11.23 Tumor suppressor gene q22.2 20006 ChimerSeq STARFusion TCGA_RNA-Seq CRHR1-PPP6R3 CRHR1 chr17 43699407 + PPP6R3 chr11 68363565 + Exonic hg19 BRCA TCGA-AO-A0J3-01A 3 3 5'UTR-CDS Inter-chr q21.31 q13.2 20007 ChimerSeq STARFusion TCGA_RNA-Seq MGC57346-PPP6R3 MGC57346 chr17 43699407 + PPP6R3 chr11 68363565 + Exonic hg19 BRCA TCGA-AO-A0J3-01A 3 3 5'UTR-CDS Inter-chr q13.2 20008 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 BRCA TCGA-AO-A0J3-01A 2 0 In-Frame Intra-chr p11.21 p11.21 20009 ChimerSeq STARFusion TCGA_RNA-Seq VMP1-AMZ2 VMP1 chr17 57915758 + AMZ2 chr17 66250545 + Exonic hg19 BRCA TCGA-AO-A0J3-01A 2 0 Out-of-frame Intra-chr q23.1 q24.2 20010 ChimerSeq STARFusion TCGA_RNA-Seq FGFR2-ENPP2 FGFR2 chr10 123274637 - ENPP2 chr8 120650767 - Exonic hg19 BRCA TCGA-LD-A7W5-01A 36 116 In-Frame Inter-chr q26.13 TK:FGFR Oncogene q24.12 Seq+ 20011 ChimerSeq STARFusion TCGA_RNA-Seq FGFR2-ENPP2 FGFR2 chr10 123274631 - ENPP2 chr8 120650767 - Exonic hg19 BRCA TCGA-LD-A7W5-01A 13 116 In-Frame Inter-chr q26.13 TK:FGFR Oncogene q24.12 Seq+ 20012 ChimerSeq STARFusion TCGA_RNA-Seq GID4-FDXR GID4 chr17 17943216 + FDXR chr17 72862998 - Exonic hg19 BRCA TCGA-LD-A7W5-01A 13 53 Out-of-frame Intra-chr p11.2 q25.1 Seq+ 20013 ChimerSeq STARFusion TCGA_RNA-Seq GID4-FDXR GID4 chr17 17943216 + FDXR chr17 72863001 - Exonic hg19 BRCA TCGA-LD-A7W5-01A 3 53 Out-of-frame Intra-chr p11.2 q25.1 Seq+ 20014 ChimerSeq STARFusion TCGA_RNA-Seq TECTB-ATRNL1 TECTB chr10 114046149 + ATRNL1 chr10 117486758 + Exonic hg19 BRCA TCGA-LD-A7W5-01A 8 3 In-Frame Intra-chr q25.2 q25.3 Seq+ 20015 ChimerSeq STARFusion TCGA_RNA-Seq VDAC2-TYSND1 VDAC2 chr10 76989459 + TYSND1 chr10 71899897 - Exonic hg19 BRCA TCGA-LD-A7W5-01A 5 7 In-Frame Intra-chr q22.2 q22.1 Seq+ 20016 ChimerSeq STARFusion TCGA_RNA-Seq PDCD7-TAF15 PDCD7 chr15 65421370 - TAF15 chr17 34144720 + Exonic hg19 BRCA TCGA-LD-A7W5-01A 3 14 In-Frame Inter-chr q22.31 q12 Seq+ 20017 ChimerSeq STARFusion TCGA_RNA-Seq CTBP1-POLN CTBP1 chr4 1231971 - POLN chr4 2097660 - Exonic hg19 BRCA TCGA-LD-A7W5-01A 3 5 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 20018 ChimerSeq STARFusion TCGA_RNA-Seq SYT1-ACSS3 SYT1 chr12 79441142 + ACSS3 chr12 81593120 + Exonic hg19 BRCA TCGA-D8-A1XY-01A 6 5 5'UTR-CDS Intra-chr q21.2 q21.31 Seq+ 20019 ChimerSeq STARFusion TCGA_RNA-Seq NBEA-ALG5 NBEA chr13 35691630 + ALG5 chr13 37546173 - Exonic hg19 BRCA TCGA-D8-A1XY-01A 5 7 In-Frame Intra-chr q13.3 q13.3 Seq+ 20020 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-TRIP12 DGKD chr2 234299129 + TRIP12 chr2 230636348 - Exonic hg19 BRCA TCGA-D8-A1XY-01A 2 0 In-Frame Intra-chr q36.3 20021 ChimerSeq STARFusion TCGA_RNA-Seq NAT1-PCM1 NAT1 chr8 18067689 + PCM1 chr8 17882870 + Exonic hg19 BRCA TCGA-D8-A1XY-01A 2 0 5'UTR-CDS Intra-chr p22 p22 20022 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80954854 - MRPS28 chr8 80831382 - Exonic hg19 BRCA TCGA-C8-A1HJ-01A 8 20 Out-of-frame Intra-chr q21.13 q21.13 20023 ChimerSeq STARFusion TCGA_RNA-Seq ERC1-RET ERC1 chr12 1250953 + RET chr10 43612032 + Exonic hg19 BRCA TCGA-C8-A1HJ-01A 8 18 In-Frame Inter-chr q11.21 TK:Ret Oncogene KB Seq+ 20024 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80963762 - MRPS28 chr8 80831383 - Exonic hg19 BRCA TCGA-C8-A1HJ-01A 2 20 In-Frame Intra-chr q21.13 q21.13 20025 ChimerSeq STARFusion TCGA_RNA-Seq NCOA7-RAI1 NCOA7 chr6 126252245 + RAI1 chr17 17714709 + Exonic hg19 BRCA TCGA-C8-A1HJ-01A 4 0 Out-of-frame Inter-chr q22.31 p11.2 20026 ChimerSeq STARFusion TCGA_RNA-Seq NCOA7-TPD52L1 NCOA7 chr6 126211956 + TPD52L1 chr6 125569428 + Exonic hg19 BRCA TCGA-C8-A1HJ-01A 3 3 In-Frame Intra-chr q22.31 q22.31 Seq+ 20027 ChimerSeq STARFusion TCGA_RNA-Seq U2AF1-ACVR1C U2AF1 chr21 44513077 - ACVR1C chr2 158388912 - Exonic hg19 BRCA TCGA-C8-A1HJ-01A 3 0 Out-of-frame Inter-chr q22.3 Oncogene q24.1 Tumor suppressor gene 20028 ChimerSeq STARFusion TCGA_RNA-Seq LRP8-SLC1A7 LRP8 chr1 53746259 - SLC1A7 chr1 53600101 - Exonic hg19 BRCA TCGA-C8-A1HJ-01A 2 3 Out-of-frame Intra-chr p32.3 p32.3 Seq+ 20029 ChimerSeq STARFusion TCGA_RNA-Seq CCDC91-MRPS35 CCDC91 chr12 28637098 + MRPS35 chr12 27890472 + Exonic hg19 BRCA TCGA-C8-A1HJ-01A 2 1 In-Frame Intra-chr p11.22 p11.22 20030 ChimerSeq STARFusion TCGA_RNA-Seq NDUFA4-PHF14 NDUFA4 chr7 10979643 - PHF14 chr7 11150977 + Exonic hg19 BRCA TCGA-C8-A1HJ-01A 2 1 CDS-5'UTR Intra-chr p21.3 p21.3 Seq+ 20031 ChimerSeq STARFusion TCGA_RNA-Seq ATP2C1-HNRNPA2B1 ATP2C1 chr3 130569772 + HNRNPA2B1 chr7 26237486 - Exonic hg19 BRCA TCGA-C8-A1HJ-01A 2 0 In-Frame Inter-chr q22.1 p15.2 20032 ChimerSeq STARFusion TCGA_RNA-Seq COG5-DPP6 COG5 chr7 107052947 - DPP6 chr7 154519477 + Exonic hg19 BRCA TCGA-BH-A0W7-01A 2 20 In-Frame Intra-chr Seq+ 20033 ChimerSeq STARFusion TCGA_RNA-Seq MAP2K4-NIPSNAP1 MAP2K4 chr17 11924318 + NIPSNAP1 chr22 29957851 - Exonic hg19 BRCA TCGA-BH-A0W7-01A 2 2 In-Frame Inter-chr p12 STE:STE7 Oncogene Tumor suppressor gene q12.2 Seq+ 20034 ChimerSeq STARFusion TCGA_RNA-Seq MAP2K4-NIPSNAP1 MAP2K4 chr17 11924318 + NIPSNAP1 chr22 29966521 - Exonic hg19 BRCA TCGA-BH-A0W7-01A 2 2 Out-of-frame Inter-chr p12 STE:STE7 Oncogene Tumor suppressor gene q12.2 Seq+ 20035 ChimerSeq STARFusion TCGA_RNA-Seq H2AFY-CNOT6 H2AFY chr5 134688636 - CNOT6 chr5 179991489 + Exonic hg19 BRCA TCGA-E2-A15E-06A 18 73 In-Frame Intra-chr q31.1 q35.3 Seq+ 20036 ChimerSeq STARFusion TCGA_RNA-Seq HEYL-COL9A2 HEYL chr1 40105218 - COL9A2 chr1 40777387 - Exonic hg19 BRCA TCGA-E2-A15E-06A 10 81 Out-of-frame Intra-chr p34.2 Transcription factor p34.2 Seq+ 20037 ChimerSeq STARFusion TCGA_RNA-Seq SUFU-GBF1 SUFU chr10 104309863 + GBF1 chr10 104111013 + Exonic hg19 BRCA TCGA-E2-A15E-06A 10 15 In-Frame Intra-chr q24.32 Oncogene Tumor suppressor gene q24.32 Seq+ 20038 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1430-CCDC110 KIAA1430 chr4 186096940 - CCDC110 chr4 186383862 - Exonic hg19 BRCA TCGA-E2-A15E-06A 7 21 In-Frame Intra-chr q35.1 Seq+ 20039 ChimerSeq STARFusion TCGA_RNA-Seq CANX-RUFY1 CANX chr5 179155785 + RUFY1 chr5 179023563 + Exonic hg19 BRCA TCGA-E2-A15E-06A 7 20 3'UTR-CDS Intra-chr 20040 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1430-CCDC110 KIAA1430 chr4 186096940 - CCDC110 chr4 186384203 - Exonic hg19 BRCA TCGA-E2-A15E-06A 3 21 Out-of-frame Intra-chr q35.1 Seq+ 20041 ChimerSeq STARFusion TCGA_RNA-Seq TEAD1-PARVA TEAD1 chr11 12697108 + PARVA chr11 12495292 + Exonic hg19 BRCA TCGA-E2-A15E-06A 2 23 5'UTR-CDS Intra-chr p15.3 Transcription factor p15.3 Seq+ 20042 ChimerSeq STARFusion TCGA_RNA-Seq PTPN1-PREX1 PTPN1 chr20 49191191 + PREX1 chr20 47361684 - Exonic hg19 BRCA TCGA-E2-A15E-06A 6 6 In-Frame Intra-chr q13.13 Tumor suppressor gene q13.13 Seq+ 20043 ChimerSeq STARFusion TCGA_RNA-Seq LETM1-POLN LETM1 chr4 1843074 - POLN chr4 2083470 - Exonic hg19 BRCA TCGA-E2-A15E-06A 3 15 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 20044 ChimerSeq STARFusion TCGA_RNA-Seq BRE-PTPN1 BRE chr2 28248287 + PTPN1 chr20 49191054 + Exonic hg19 BRCA TCGA-E2-A15E-06A 3 10 In-Frame Inter-chr q13.13 Tumor suppressor gene Seq+ 20045 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC9-PUF60 TRAPPC9 chr8 141407719 - PUF60 chr8 144906569 - Exonic hg19 BRCA TCGA-E2-A15E-06A 2 0 In-Frame Intra-chr q24.3 20046 ChimerSeq STARFusion TCGA_RNA-Seq ZNF462-DNAJC1 ZNF462 chr9 109625636 + DNAJC1 chr10 22095028 - Exonic hg19 BRCA TCGA-A2-A04T-01A 21 42 5'UTR-CDS Inter-chr q31.2 Transcription factor p12.31 Seq+ 20047 ChimerSeq STARFusion TCGA_RNA-Seq TCF12-TEX9 TCF12 chr15 57213296 + TEX9 chr15 56665639 + Exonic hg19 BRCA TCGA-A2-A04T-01A 10 17 Out-of-frame Intra-chr q21.3 Oncogene Transcription factor q21.3 Seq+ 20048 ChimerSeq STARFusion TCGA_RNA-Seq XPR1-KIAA1614 XPR1 chr1 180601406 + KIAA1614 chr1 180907691 + Exonic hg19 BRCA TCGA-A2-A04T-01A 6 12 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 20049 ChimerSeq STARFusion TCGA_RNA-Seq RNGTT-BACH2 RNGTT chr6 89650790 - BACH2 chr6 90718575 - Exonic hg19 BRCA TCGA-A2-A04T-01A 4 11 CDS-5'UTR Intra-chr q15 q15 Transcription factor Seq+ 20050 ChimerSeq STARFusion TCGA_RNA-Seq SCNN1G-COL27A1 SCNN1G chr16 23208748 + COL27A1 chr9 116924995 + Exonic hg19 BRCA TCGA-A2-A04T-01A 2 17 5'UTR-CDS Inter-chr p12.2 q32 Seq+ 20051 ChimerSeq STARFusion TCGA_RNA-Seq SCNN1G-COL27A1 SCNN1G chr16 23224484 + COL27A1 chr9 116924995 + Exonic hg19 BRCA TCGA-A2-A04T-01A 2 17 5'UTR-CDS Inter-chr p12.2 q32 Seq+ 20052 ChimerSeq STARFusion TCGA_RNA-Seq SENP6-C6orf165 SENP6 chr6 76312292 + C6orf165 chr6 88210226 + Exonic hg19 BRCA TCGA-A2-A04T-01A 2 7 CDS-3'UTR Intra-chr q14.1 20053 ChimerSeq STARFusion TCGA_RNA-Seq SENP6-SLC35A1 SENP6 chr6 76312292 + SLC35A1 chr6 88210226 + Exonic hg19 BRCA TCGA-A2-A04T-01A 2 7 Out-of-frame Intra-chr q14.1 q15 Seq+ 20054 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L1-ENG NFE2L1 chr17 46134864 + ENG chr9 130582316 - Exonic hg19 BRCA TCGA-AC-A2FF-01A 10 30 In-Frame Inter-chr q21.32 Transcription factor q34.11 Seq+ 20055 ChimerSeq STARFusion TCGA_RNA-Seq PBX3-FAM95B1 PBX3 chr9 128697886 + FAM95B1 chr9 43027965 - Exonic hg19 BRCA TCGA-AC-A2FF-01A 4 9 CDS-3'UTR Intra-chr q33.3 Transcription factor p11.2 20056 ChimerSeq STARFusion TCGA_RNA-Seq CRHR1-OSBPL7 CRHR1 chr17 43699407 + OSBPL7 chr17 45890769 - Exonic hg19 BRCA TCGA-AC-A2FF-01A 4 7 5'UTR-CDS Intra-chr q21.31 q21.32 Seq+ 20057 ChimerSeq STARFusion TCGA_RNA-Seq MGC57346-OSBPL7 MGC57346 chr17 43699407 + OSBPL7 chr17 45890769 - Exonic hg19 BRCA TCGA-AC-A2FF-01A 4 7 5'UTR-CDS Intra-chr q21.32 20058 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-LRSAM1 FBXL20 chr17 37557614 - LRSAM1 chr9 130258243 + Exonic hg19 BRCA TCGA-AC-A2FF-01A 2 7 In-Frame Inter-chr q12 q33.3 Seq+ 20059 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-LRSAM1 FBXL20 chr17 37557614 - LRSAM1 chr9 130257599 + Exonic hg19 BRCA TCGA-AC-A2FF-01A 2 7 In-Frame Inter-chr q12 q33.3 Seq+ 20060 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 BRCA TCGA-AC-A2FF-01A 2 1 In-Frame Intra-chr p11.21 p11.21 20061 ChimerSeq STARFusion TCGA_RNA-Seq PAPD5-SHANK2 PAPD5 chr16 50250106 + SHANK2 chr11 70858384 - Exonic hg19 BRCA TCGA-EW-A1J5-01A 169 688 CDS-5'UTR Inter-chr q12.1 q13.4 Seq+ 20062 ChimerSeq STARFusion TCGA_RNA-Seq MTL5-PPFIA1 MTL5 chr11 68506168 - PPFIA1 chr11 70208201 + Exonic hg19 BRCA TCGA-EW-A1J5-01A 11 37 In-Frame Intra-chr q13.3 Seq+ 20063 ChimerSeq STARFusion TCGA_RNA-Seq GGA2-WNT9A GGA2 chr16 23504681 - WNT9A chr1 228113220 - Exonic hg19 BRCA TCGA-EW-A1J5-01A 2 1 Out-of-frame Inter-chr p12.2 q42.13 20064 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 BRCA TCGA-EW-A1J5-01A 2 1 CDS-5'UTR Intra-chr p12 p12 Transcription factor 20065 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-AP4S1 RCC1 chr1 28832596 + AP4S1 chr14 31535332 + Exonic hg19 BRCA TCGA-EW-A1J5-01A 2 0 5'UTR-5'UTR Inter-chr p35.3 q12 20066 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-AP4S1 SNHG3 chr1 28832596 + AP4S1 chr14 31535332 + Exonic hg19 BRCA TCGA-EW-A1J5-01A 2 0 5'UTR-5'UTR Inter-chr p35.3 q12 20067 ChimerSeq STARFusion TCGA_RNA-Seq GINS4-UQCRC2 GINS4 chr8 41387817 + UQCRC2 chr16 21994409 + Exonic hg19 BRCA TCGA-E9-A54Y 8 43 In-Frame Inter-chr p11.21 Seq+ 20068 ChimerSeq STARFusion TCGA_RNA-Seq ARID4B-LINC00184 ARID4B chr1 235490229 - LINC00184 chr1 234765355 + Exonic hg19 BRCA TCGA-A1-A0SD-01A 4 14 CDS-5'UTR Intra-chr q42.3 q42.3 20069 ChimerSeq STARFusion TCGA_RNA-Seq PCM1-NAT1 PCM1 chr8 17843596 + NAT1 chr8 18028188 + Exonic hg19 BRCA TCGA-A1-A0SD-01A 4 7 CDS-5'UTR Intra-chr p22 p22 Seq+ 20070 ChimerSeq STARFusion TCGA_RNA-Seq TGFB3-STIM2 TGFB3 chr14 76446885 - STIM2 chr4 27024141 + Exonic hg19 BRCA TCGA-A1-A0SD-01A 2 1 Out-of-frame Inter-chr q24.3 p15.2 20071 ChimerSeq STARFusion TCGA_RNA-Seq UBE2J2-ACAP3 UBE2J2 chr1 1203242 - ACAP3 chr1 1229579 - Exonic hg19 BRCA TCGA-OL-A66I-01A 30 169 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 20072 ChimerSeq STARFusion TCGA_RNA-Seq PACSIN2-CYB5R3 PACSIN2 chr22 43411027 - CYB5R3 chr22 43032852 - Exonic hg19 BRCA TCGA-OL-A66I-01A 22 153 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 20073 ChimerSeq STARFusion TCGA_RNA-Seq GRAMD4-TBC1D22A GRAMD4 chr22 47033857 + TBC1D22A chr22 47274549 + Exonic hg19 BRCA TCGA-OL-A66I-01A 26 106 In-Frame Intra-chr q13.31 q13.31 Seq+ 20074 ChimerSeq STARFusion TCGA_RNA-Seq ASCC1-MICU1 ASCC1 chr10 73956569 - MICU1 chr10 74183129 - Exonic hg19 BRCA TCGA-OL-A66I-01A 14 36 In-Frame Intra-chr q22.1 q22.1 Seq+ 20075 ChimerSeq STARFusion TCGA_RNA-Seq MED25-MAPK15 MED25 chr19 50335672 + MAPK15 chr8 144799864 + Exonic hg19 BRCA TCGA-OL-A66I-01A 7 21 In-Frame Inter-chr q13.33 Seq+ 20076 ChimerSeq STARFusion TCGA_RNA-Seq MUC16-OR7G2 MUC16 chr19 9033231 - OR7G2 chr19 9213935 - Exonic hg19 BRCA TCGA-OL-A66I-01A 3 33 Out-of-frame Intra-chr p13.2 p13.2 20077 ChimerSeq STARFusion TCGA_RNA-Seq MUC16-OR7G2 MUC16 chr19 9033196 - OR7G2 chr19 9213935 - Exonic hg19 BRCA TCGA-OL-A66I-01A 3 33 Out-of-frame Intra-chr p13.2 p13.2 20078 ChimerSeq STARFusion TCGA_RNA-Seq PAH-NINJ2 PAH chr12 103306569 - NINJ2 chr12 675344 - Exonic hg19 BRCA TCGA-OL-A66I-01A 2 28 In-Frame Intra-chr q23.2 p13.33 Seq+ 20079 ChimerSeq STARFusion TCGA_RNA-Seq GOLGA4-CTDSPL GOLGA4 chr3 37315092 + CTDSPL chr3 38006062 + Exonic hg19 BRCA TCGA-OL-A66I-01A 4 18 In-Frame Intra-chr p22.2 p22.2 Tumor suppressor gene Seq+ 20080 ChimerSeq STARFusion TCGA_RNA-Seq DOT1L-EPB41L2 DOT1L chr19 2180755 + EPB41L2 chr6 131277639 - Exonic hg19 BRCA TCGA-OL-A66I-01A 4 17 CDS-5'UTR Inter-chr p13.3 Oncogene Transcription factor q23.2 Seq+ 20081 ChimerSeq STARFusion TCGA_RNA-Seq STK11-SMARCD2 STK11 chr19 1207202 + SMARCD2 chr17 61914985 - Exonic hg19 BRCA TCGA-OL-A66I-01A 2 11 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene q23.3 Seq+ 20082 ChimerSeq STARFusion TCGA_RNA-Seq LRPPRC-CYTIP LRPPRC chr2 44161329 - CYTIP chr2 158300518 - Exonic hg19 BRCA TCGA-OL-A66I-01A 3 6 In-Frame Intra-chr p21 q24.1 Seq+ 20083 ChimerSeq STARFusion TCGA_RNA-Seq TOX-PGBD2 TOX chr8 59851861 - PGBD2 chr1 249208015 + Exonic hg19 BRCA TCGA-OL-A66I-01A 2 6 CDS-5'UTR Inter-chr q12.1 q44 Seq+ 20084 ChimerSeq STARFusion TCGA_RNA-Seq FBXO32-ANXA13 FBXO32 chr8 124544138 - ANXA13 chr8 124693599 - Exonic hg19 BRCA TCGA-OL-A66I-01A 2 5 In-Frame Intra-chr q24.13 Tumor suppressor gene q24.13 Seq+ 20085 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-ZNF500 CREBBP chr16 3929833 - ZNF500 chr16 4803059 - Exonic hg19 BRCA TCGA-OL-A66I-01A 2 4 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Transcription factor Seq+ 20086 ChimerSeq STARFusion TCGA_RNA-Seq ZMIZ1-LINC00856 ZMIZ1 chr10 80976031 + LINC00856 chr10 80434446 + Exonic hg19 BRCA TCGA-D8-A1X6-01A 20 43 Out-of-frame Intra-chr q22.3 q22.3 20087 ChimerSeq STARFusion TCGA_RNA-Seq ITPRIPL2-RN7SL2 ITPRIPL2 chr16 19131490 + RN7SL2 chr14 50329500 - Exonic hg19 BRCA TCGA-D8-A1X6-01A 3 16 Out-of-frame Inter-chr p12.3 q21.3 20088 ChimerSeq STARFusion TCGA_RNA-Seq ATL2-HNRNPLL ATL2 chr2 38604285 - HNRNPLL chr2 38800569 - Exonic hg19 BRCA TCGA-A8-A07R-01A 144 385 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 20089 ChimerSeq STARFusion TCGA_RNA-Seq VKORC1L1-GUSB VKORC1L1 chr7 65338552 + GUSB chr7 65435353 - Exonic hg19 BRCA TCGA-A8-A07R-01A 27 49 In-Frame Intra-chr q11.21 q11.21 Seq+ 20090 ChimerSeq STARFusion TCGA_RNA-Seq PLXDC2-SYNE1 PLXDC2 chr10 20290915 + SYNE1 chr6 152793548 - Exonic hg19 BRCA TCGA-A8-A07R-01A 11 14 In-Frame Inter-chr p12.31 q25.2 Oncogene Seq+ 20091 ChimerSeq STARFusion TCGA_RNA-Seq GAK-MAGI1 GAK chr4 905461 - MAGI1 chr3 65607763 - Exonic hg19 BRCA TCGA-A8-A07R-01A 3 15 In-Frame Inter-chr p16.3 Other:NAK Oncogene Seq+ 20092 ChimerSeq STARFusion TCGA_RNA-Seq ADIPOR2-ERC1 ADIPOR2 chr12 1800357 + ERC1 chr12 1372200 + Exonic hg19 BRCA TCGA-A8-A07R-01A 3 11 5'UTR-5'UTR Intra-chr p13.33 Seq+ 20093 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-RILPL2 NCOR2 chr12 124812113 - RILPL2 chr12 123903133 - Exonic hg19 BRCA TCGA-AO-A126-01A 18 28 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 20094 ChimerSeq STARFusion TCGA_RNA-Seq MLL3-CLIP2 MLL3 chr7 151871216 - CLIP2 chr7 73811404 + Exonic hg19 BRCA TCGA-AO-A126-01A 15 12 In-Frame Intra-chr Tumor suppressor gene q11.23 Seq+ 20095 ChimerSeq STARFusion TCGA_RNA-Seq C16orf45-RHBDL2 C16orf45 chr16 15528616 + RHBDL2 chr1 39385009 - Exonic hg19 BRCA TCGA-AO-A126-01A 2 4 CDS-5'UTR Inter-chr p34.3 Seq+ 20096 ChimerSeq STARFusion TCGA_RNA-Seq RAD51B-DCAF5 RAD51B chr14 68353921 + DCAF5 chr14 69589077 - Exonic hg19 BRCA TCGA-E9-A1N4-01A 2 2 Out-of-frame Intra-chr q24.1 q24.1 KB Seq+ 20097 ChimerSeq STARFusion TCGA_RNA-Seq PEX1-NBEA PEX1 chr7 92129018 - NBEA chr13 35615070 + Exonic hg19 BRCA TCGA-A2-A25C-01A 2 10 In-Frame Inter-chr q21.2 q13.3 Seq+ 20098 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP35-COL22A1 ARHGAP35 chr19 47440665 + COL22A1 chr8 139793223 - Exonic hg19 BRCA TCGA-D8-A1XZ-01A 12 174 Out-of-frame Inter-chr q13.32 Transcription factor q24.3 Seq+ 20099 ChimerSeq STARFusion TCGA_RNA-Seq PAK4-CATSPERG PAK4 chr19 39616559 + CATSPERG chr19 38848918 + Exonic hg19 BRCA TCGA-D8-A1XZ-01A 16 70 5'UTR-CDS Intra-chr q13.2 STE:STE20 q13.2 Seq+ 20100 ChimerSeq STARFusion TCGA_RNA-Seq SURF4-IGH@ SURF4 chr9 136230331 - IGH@ chr14 106330842 - Exonic hg19 BRCA TCGA-D8-A1XZ-01A 24 2 Out-of-frame Inter-chr 32.33 20101 ChimerSeq STARFusion TCGA_RNA-Seq SURF4-IGHG3 SURF4 chr9 136230331 - IGHG3 chr14 106330842 - Exonic hg19 BRCA TCGA-D8-A1XZ-01A 24 1 Out-of-frame Inter-chr 20102 ChimerSeq STARFusion TCGA_RNA-Seq ACOT7-FUCA1 ACOT7 chr1 6341162 - FUCA1 chr1 24181050 - Exonic hg19 BRCA TCGA-D8-A1XZ-01A 13 37 In-Frame Intra-chr p36.31 p36.11 Seq+ 20103 ChimerSeq STARFusion TCGA_RNA-Seq PAK4-CATSPERG PAK4 chr19 39616559 + CATSPERG chr19 38851129 + Exonic hg19 BRCA TCGA-D8-A1XZ-01A 3 69 5'UTR-CDS Intra-chr q13.2 STE:STE20 q13.2 Seq+ 20104 ChimerSeq STARFusion TCGA_RNA-Seq PAK4-CATSPERG PAK4 chr19 39616559 + CATSPERG chr19 38860799 + Exonic hg19 BRCA TCGA-D8-A1XZ-01A 2 69 5'UTR-CDS Intra-chr q13.2 STE:STE20 q13.2 Seq+ 20105 ChimerSeq STARFusion TCGA_RNA-Seq PAK4-CATSPERG PAK4 chr19 39616559 + CATSPERG chr19 38860612 + Exonic hg19 BRCA TCGA-D8-A1XZ-01A 2 69 5'UTR-CDS Intra-chr q13.2 STE:STE20 q13.2 Seq+ 20106 ChimerSeq STARFusion TCGA_RNA-Seq FAM172A-EFNA5 FAM172A chr5 93447216 - EFNA5 chr5 106763210 - Exonic hg19 BRCA TCGA-D8-A1XZ-01A 8 38 5'UTR-CDS Intra-chr q15 Tumor suppressor gene q21.3 Tumor suppressor gene Seq+ 20107 ChimerSeq STARFusion TCGA_RNA-Seq SRRM1-AUNIP SRRM1 chr1 24981620 + AUNIP chr1 26164045 - Exonic hg19 BRCA TCGA-D8-A1XZ-01A 6 34 Out-of-frame Intra-chr p36.11 p36.11 Seq+ 20108 ChimerSeq STARFusion TCGA_RNA-Seq PDE7A-PREX2 PDE7A chr8 66647029 - PREX2 chr8 68950394 + Exonic hg19 BRCA TCGA-D8-A1XZ-01A 9 18 In-Frame Intra-chr q13.1 q13.2 Seq+ 20109 ChimerSeq STARFusion TCGA_RNA-Seq SRRM1-AUNIP SRRM1 chr1 24981614 + AUNIP chr1 26164045 - Exonic hg19 BRCA TCGA-D8-A1XZ-01A 4 34 Out-of-frame Intra-chr p36.11 p36.11 Seq+ 20110 ChimerSeq STARFusion TCGA_RNA-Seq RPL11-CAMTA1 RPL11 chr1 24022398 + CAMTA1 chr1 7805905 + Exonic hg19 BRCA TCGA-D8-A1XZ-01A 4 15 Out-of-frame Intra-chr p36.11 Tumor suppressor gene p36.31 Tumor suppressor gene Transcription factor Seq+ 20111 ChimerSeq STARFusion TCGA_RNA-Seq STAU2-RPL7 STAU2 chr8 74585342 - RPL7 chr8 74205032 - Exonic hg19 BRCA TCGA-D8-A1XZ-01A 2 18 In-Frame Intra-chr q21.11 q21.11 20112 ChimerSeq STARFusion TCGA_RNA-Seq ZNF699-ELAVL1 ZNF699 chr19 9413054 - ELAVL1 chr19 8056715 - Exonic hg19 BRCA TCGA-D8-A1XZ-01A 3 14 CDS-5'UTR Intra-chr p13.2 Transcription factor p13.2 Seq+ 20113 ChimerSeq STARFusion TCGA_RNA-Seq HSPB1-IGH@ HSPB1 chr7 75933183 + IGH@ chr14 106235867 - Exonic hg19 BRCA TCGA-D8-A1XZ-01A 3 12 Out-of-frame Inter-chr q11.23 32.33 20114 ChimerSeq STARFusion TCGA_RNA-Seq KDM4A-HYI KDM4A chr1 44149475 + HYI chr1 43917990 - Exonic hg19 BRCA TCGA-D8-A1XZ-01A 2 13 Out-of-frame Intra-chr p34.2 p34.2 Seq+ 20115 ChimerSeq STARFusion TCGA_RNA-Seq RERE-CYP4A11 RERE chr1 8525985 - CYP4A11 chr1 47403809 - Exonic hg19 BRCA TCGA-D8-A1XZ-01A 2 12 In-Frame Intra-chr p36.23 p33 Seq+ 20116 ChimerSeq STARFusion TCGA_RNA-Seq MTBP-PQLC2 MTBP chr8 121458753 + PQLC2 chr1 19651989 + Exonic hg19 BRCA TCGA-D8-A1XZ-01A 2 10 Out-of-frame Inter-chr q24.12 p36.13 Seq+ 20117 ChimerSeq STARFusion TCGA_RNA-Seq NELL1-CCDC83 NELL1 chr11 20982106 + CCDC83 chr11 85576139 + Exonic hg19 BRCA TCGA-D8-A1XZ-01A 2 10 CDS-5'UTR Intra-chr p15.1 q14.1 Seq+ 20118 ChimerSeq STARFusion TCGA_RNA-Seq LITAF-ABCA17P LITAF chr16 11680742 - ABCA17P chr16 2411117 + Exonic hg19 BRCA TCGA-B6-A0RI-01A 36 67 5'UTR-5'UTR Intra-chr p13.13 Tumor suppressor gene p13.3 Seq+ 20119 ChimerSeq STARFusion TCGA_RNA-Seq PPIG-CRIM1 PPIG chr2 170441000 + CRIM1 chr2 36726362 + Exonic hg19 BRCA TCGA-B6-A0RI-01A 9 45 5'UTR-CDS Intra-chr q31.1 p22.2 Seq+ 20120 ChimerSeq STARFusion TCGA_RNA-Seq KLHDC10-LOC100507412 KLHDC10 chr7 129710649 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-A2-A0YM-01A 106 142 CDS-5'UTR Inter-chr q32.2 20121 ChimerSeq STARFusion TCGA_RNA-Seq MPP5-GPHN MPP5 chr14 67708250 + GPHN chr14 67610079 + Exonic hg19 BRCA TCGA-A2-A0YM-01A 17 36 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 20122 ChimerSeq STARFusion TCGA_RNA-Seq PBX1-ILDR2 PBX1 chr1 164532548 + ILDR2 chr1 166927338 - Exonic hg19 BRCA TCGA-A2-A0YM-01A 7 25 In-Frame Intra-chr q23.3 Oncogene Transcription factor q24.1 Seq+ 20123 ChimerSeq STARFusion TCGA_RNA-Seq RGL3-ECSIT RGL3 chr19 11510531 - ECSIT chr19 11617243 - Exonic hg19 BRCA TCGA-A2-A0YM-01A 5 24 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 20124 ChimerSeq STARFusion TCGA_RNA-Seq MEGF8-PRR19 MEGF8 chr19 42841358 + PRR19 chr19 42813731 + Exonic hg19 BRCA TCGA-A2-A0YM-01A 5 21 CDS-5'UTR Intra-chr q13.2 q13.2 Seq+ 20125 ChimerSeq STARFusion TCGA_RNA-Seq CLIP1-SLC24A6 CLIP1 chr12 122861936 - SLC24A6 chr12 113748160 - Exonic hg19 BRCA TCGA-A2-A0YM-01A 2 6 Out-of-frame Intra-chr q24.31 Seq+ 20126 ChimerSeq STARFusion TCGA_RNA-Seq GABBR1-LOC151174 GABBR1 chr6_qbl_hap6 901567 - LOC151174 chr2 239136439 - Exonic hg19 BRCA TCGA-A2-A0YM-01A 2 0 3'UTR-3'UTR Inter-chr 20127 ChimerSeq STARFusion TCGA_RNA-Seq ACAP2-XXYLT1 ACAP2 chr3 195101738 - XXYLT1 chr3 194790840 - Exonic hg19 BRCA TCGA-E9-A1QZ-01A 2 5 Out-of-frame Intra-chr q29 q29 Seq+ 20128 ChimerSeq STARFusion TCGA_RNA-Seq RANBP3-N6AMT2 RANBP3 chr19 5978072 - N6AMT2 chr13 21306260 - Exonic hg19 BRCA TCGA-MS-A51U-01A 3 58 Out-of-frame Inter-chr p13.3 Seq+ 20129 ChimerSeq STARFusion TCGA_RNA-Seq RANBP3-N6AMT2 RANBP3 chr19 5951404 - N6AMT2 chr13 21303355 - Exonic hg19 BRCA TCGA-MS-A51U-01A 2 58 Out-of-frame Inter-chr p13.3 Seq+ 20130 ChimerSeq STARFusion TCGA_RNA-Seq RANBP3-N6AMT2 RANBP3 chr19 5951404 - N6AMT2 chr13 21311944 - Exonic hg19 BRCA TCGA-MS-A51U-01A 2 58 In-Frame Inter-chr p13.3 Seq+ 20131 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC10-HSPA4 ZCCHC10 chr5 132362189 - HSPA4 chr5 132400672 + Exonic hg19 BRCA TCGA-BH-A18F-01A 2 1 In-Frame Intra-chr q31.1 q31.1 20132 ChimerSeq STARFusion TCGA_RNA-Seq ITGB6-BAZ2B ITGB6 chr2 160964190 - BAZ2B chr2 160335232 - Exonic hg19 BRCA TCGA-C8-A26W-01A 120 253 CDS-5'UTR Intra-chr q24.2 q24.2 Transcription factor Seq+ 20133 ChimerSeq STARFusion TCGA_RNA-Seq PIP4K2B-TMEM99 PIP4K2B chr17 36933940 - TMEM99 chr17 38989367 + Exonic hg19 BRCA TCGA-C8-A26W-01A 12 37 CDS-5'UTR Intra-chr q12 q21.2 Seq+ 20134 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-LOC284100 TAOK1 chr17 27857637 + LOC284100 chr17 36214848 - Exonic hg19 BRCA TCGA-C8-A26W-01A 9 29 CDS-3'UTR Intra-chr q11.2 20135 ChimerSeq STARFusion TCGA_RNA-Seq UBE2D2-PAIP1 UBE2D2 chr5 138941400 + PAIP1 chr5 43556101 - Exonic hg19 BRCA TCGA-C8-A26W-01A 6 13 Out-of-frame Intra-chr q31.2 p12 Seq+ 20136 ChimerSeq STARFusion TCGA_RNA-Seq NACC1-DOCK6 NACC1 chr19 13229268 + DOCK6 chr19 11344042 - Exonic hg19 BRCA TCGA-C8-A26W-01A 7 0 5'UTR-CDS Intra-chr p13.13 p13.2 Seq+ 20137 ChimerSeq STARFusion TCGA_RNA-Seq PKN1-LDLR PKN1 chr19 14557373 + LDLR chr19 11227535 + Exonic hg19 BRCA TCGA-C8-A26W-01A 2 16 In-Frame Intra-chr p13.12 AGC:PKN p13.2 Seq+ 20138 ChimerSeq STARFusion TCGA_RNA-Seq PAK2-PIGX PAK2 chr3 196467028 + PIGX chr3 196443729 + Exonic hg19 BRCA TCGA-C8-A26W-01A 4 6 5'UTR-CDS Intra-chr q29 STE:STE20 q29 Seq+ 20139 ChimerSeq STARFusion TCGA_RNA-Seq CDK7-RGS20 CDK7 chr5 68531280 + RGS20 chr8 54866636 + Exonic hg19 BRCA TCGA-C8-A26W-01A 4 3 Out-of-frame Inter-chr CMGC:CDK q11.23 Seq+ 20140 ChimerSeq STARFusion TCGA_RNA-Seq ANAPC16-MICU1 ANAPC16 chr10 73975830 + MICU1 chr10 74237014 - Exonic hg19 BRCA TCGA-A8-A06Q-01A 106 478 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 20141 ChimerSeq STARFusion TCGA_RNA-Seq ANAPC16-MICU1 ANAPC16 chr10 73975896 + MICU1 chr10 74237014 - Exonic hg19 BRCA TCGA-A8-A06Q-01A 104 478 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 20142 ChimerSeq STARFusion TCGA_RNA-Seq NR2C2-ASCC1 NR2C2 chr3 15055296 + ASCC1 chr10 73857208 - Exonic hg19 BRCA TCGA-A8-A06Q-01A 110 306 In-Frame Inter-chr p25.1 Tumor suppressor gene Transcription factor q22.1 Seq+ 20143 ChimerSeq STARFusion TCGA_RNA-Seq ANAPC16-MICU1 ANAPC16 chr10 73983814 + MICU1 chr10 74237014 - Exonic hg19 BRCA TCGA-A8-A06Q-01A 15 478 In-Frame Intra-chr q22.1 q22.1 Seq+ 20144 ChimerSeq STARFusion TCGA_RNA-Seq ANAPC16-MICU1 ANAPC16 chr10 73980137 + MICU1 chr10 74237014 - Exonic hg19 BRCA TCGA-A8-A06Q-01A 14 478 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 20145 ChimerSeq STARFusion TCGA_RNA-Seq XPC-RCOR1 XPC chr3 14209757 - RCOR1 chr14 103177272 + Exonic hg19 BRCA TCGA-A8-A06Q-01A 24 84 In-Frame Inter-chr p25.1 Oncogene q32.31 Seq+ 20146 ChimerSeq STARFusion TCGA_RNA-Seq PCNXL3-SNX32 PCNXL3 chr11 65398075 + SNX32 chr11 65616949 + Exonic hg19 BRCA TCGA-A8-A06Q-01A 11 54 In-Frame Intra-chr q13.1 20147 ChimerSeq STARFusion TCGA_RNA-Seq EYS-TSG1 EYS chr6 66200487 - TSG1 chr6 94475733 + Exonic hg19 BRCA TCGA-A8-A06Q-01A 12 40 CDS-5'UTR Intra-chr q12 20148 ChimerSeq STARFusion TCGA_RNA-Seq MKRN2-FOLH1 MKRN2 chr3 12598675 + FOLH1 chr11 49227724 - Exonic hg19 BRCA TCGA-A8-A06Q-01A 6 8 Out-of-frame Inter-chr p25.2 p11.12 Seq+ 20149 ChimerSeq STARFusion TCGA_RNA-Seq APOPT1-ATP9A APOPT1 chr14 104040507 + ATP9A chr20 50314021 - Exonic hg19 BRCA TCGA-A8-A06Q-01A 4 15 In-Frame Inter-chr q32.33 q13.2 Seq+ 20150 ChimerSeq STARFusion TCGA_RNA-Seq FANCD2-CINP FANCD2 chr3 10088407 + CINP chr14 102822234 - Exonic hg19 BRCA TCGA-A8-A06Q-01A 5 11 Out-of-frame Inter-chr p25.3 Oncogene q32.31 Seq+ 20151 ChimerSeq STARFusion TCGA_RNA-Seq GREB1L-CEP192 GREB1L chr18 18822354 + CEP192 chr18 13100304 + Exonic hg19 BRCA TCGA-A8-A06Q-01A 6 6 5'UTR-CDS Intra-chr q11.1 p11.21 Seq+ 20152 ChimerSeq STARFusion TCGA_RNA-Seq TMTC2-PPFIA2 TMTC2 chr12 83455610 + PPFIA2 chr12 81851645 - Exonic hg19 BRCA TCGA-A8-A06Q-01A 3 13 In-Frame Intra-chr q21.31 q21.31 Seq+ 20153 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-KLHL28 SSH2 chr17 28256956 - KLHL28 chr14 45415131 - Exonic hg19 BRCA TCGA-A8-A06Q-01A 4 8 CDS-5'UTR Inter-chr q11.2 q21.2 Seq+ 20154 ChimerSeq STARFusion TCGA_RNA-Seq VPS41-ELMO1 VPS41 chr7 38794302 - ELMO1 chr7 37053040 - Exonic hg19 BRCA TCGA-A8-A06Q-01A 4 3 Out-of-frame Intra-chr p14.1 p14.1 Seq+ 20155 ChimerSeq STARFusion TCGA_RNA-Seq PPA1-MGAT4C PPA1 chr10 71977568 - MGAT4C chr12 86383330 - Exonic hg19 BRCA TCGA-A8-A06Q-01A 2 4 CDS-5'UTR Inter-chr q22.1 Seq+ 20156 ChimerSeq STARFusion TCGA_RNA-Seq PRPF19-RAB1B PRPF19 chr11 60658575 - RAB1B chr11 66043975 + Exonic hg19 BRCA TCGA-A8-A06N-01A 57 481 Out-of-frame Intra-chr q12.2 q13.2 Seq+ 20157 ChimerSeq STARFusion TCGA_RNA-Seq SDHAF2-RIN1 SDHAF2 chr11 61197654 + RIN1 chr11 66101129 - Exonic hg19 BRCA TCGA-A8-A06N-01A 24 129 Out-of-frame Intra-chr q12.2 q13.2 Seq+ 20158 ChimerSeq STARFusion TCGA_RNA-Seq SDHAF2-RIN1 SDHAF2 chr11 61205585 + RIN1 chr11 66101129 - Exonic hg19 BRCA TCGA-A8-A06N-01A 18 129 In-Frame Intra-chr q12.2 q13.2 Seq+ 20159 ChimerSeq STARFusion TCGA_RNA-Seq TOM1-PITPNB TOM1 chr22 35695973 + PITPNB chr22 28293880 - Exonic hg19 BRCA TCGA-A8-A06N-01A 13 49 Out-of-frame Intra-chr q12.3 q12.1 Seq+ 20160 ChimerSeq STARFusion TCGA_RNA-Seq CMPK1-SH2D1B CMPK1 chr1 47799788 + SH2D1B chr1 162372592 - Exonic hg19 BRCA TCGA-A8-A06N-01A 10 32 Out-of-frame Intra-chr p33 Oncogene q23.3 Seq+ 20161 ChimerSeq STARFusion TCGA_RNA-Seq GYS1-EML2 GYS1 chr19 49485512 - EML2 chr19 46116929 - Exonic hg19 BRCA TCGA-BH-A1F6-01A 134 381 Out-of-frame Intra-chr q13.33 q13.32 Seq+ 20162 ChimerSeq STARFusion TCGA_RNA-Seq BPTF-PITPNC1 BPTF chr17 65936772 + PITPNC1 chr17 65665624 + Exonic hg19 BRCA TCGA-BH-A1F6-01A 48 177 In-Frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 20163 ChimerSeq STARFusion TCGA_RNA-Seq ARID1B-SNX9 ARID1B chr6 157150555 + SNX9 chr6 158288579 + Exonic hg19 BRCA TCGA-BH-A1F6-01A 11 53 In-Frame Intra-chr q25.3 Oncogene q25.3 Pub Seq+ 20164 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-PTPRK PUM1 chr1 31478700 - PTPRK chr6 128643455 - Exonic hg19 BRCA TCGA-BH-A1F6-01A 4 46 Out-of-frame Inter-chr p35.2 Tumor suppressor gene Seq+ 20165 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-PTPRK PUM1 chr1 31479841 - PTPRK chr6 128643455 - Exonic hg19 BRCA TCGA-BH-A1F6-01A 4 46 In-Frame Inter-chr p35.2 Tumor suppressor gene Seq+ 20166 ChimerSeq STARFusion TCGA_RNA-Seq TRIM4-TAF6 TRIM4 chr7 99500841 - TAF6 chr7 99707696 - Exonic hg19 BRCA TCGA-BH-A1F6-01A 6 28 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 20167 ChimerSeq STARFusion TCGA_RNA-Seq SPINT2-ACTN4 SPINT2 chr19 38781215 + ACTN4 chr19 39191240 + Exonic hg19 BRCA TCGA-BH-A1F6-01A 4 35 Out-of-frame Intra-chr q13.2 Tumor suppressor gene 20168 ChimerSeq STARFusion TCGA_RNA-Seq CDK1-LINC00845 CDK1 chr10 62545545 + LINC00845 chr10 62785550 + Exonic hg19 BRCA TCGA-BH-A1F6-01A 6 26 Out-of-frame Intra-chr q21.2 q21.2 20169 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-NCOR2 IGH@ chr14 107169929 - NCOR2 chr12 124821320 - Exonic hg19 BRCA TCGA-BH-A1F6-01A 10 1 Out-of-frame Inter-chr 32.33 q24.31 20170 ChimerSeq STARFusion TCGA_RNA-Seq SPTBN4-C19orf47 SPTBN4 chr19 41026058 + C19orf47 chr19 40842314 - Exonic hg19 BRCA TCGA-BH-A1F6-01A 6 16 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 20171 ChimerSeq STARFusion TCGA_RNA-Seq AURKB-MYH10 AURKB chr17 8113848 - MYH10 chr17 8452105 - Exonic hg19 BRCA TCGA-BH-A1F6-01A 7 4 5'UTR-CDS Intra-chr p13.1 Oncogene p13.1 Seq+ 20172 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-NCOR2 IGH@ chr14 107095124 - NCOR2 chr12 124821320 - Exonic hg19 BRCA TCGA-BH-A1F6-01A 7 1 Out-of-frame Inter-chr 32.33 q24.31 20173 ChimerSeq STARFusion TCGA_RNA-Seq HK1-HKDC1 HK1 chr10 71078766 + HKDC1 chr10 71007116 + Exonic hg19 BRCA TCGA-BH-A1F6-01A 2 19 Out-of-frame Intra-chr q22.1 q22.1 20174 ChimerSeq STARFusion TCGA_RNA-Seq AKAP8L-BRD4 AKAP8L chr19 15514286 - BRD4 chr19 15383944 - Exonic hg19 BRCA TCGA-BH-A1F6-01A 2 15 CDS-5'UTR Intra-chr p13.12 Transcription factor p13.12 Atypical:BRD Seq+ 20175 ChimerSeq STARFusion TCGA_RNA-Seq LRRC37A3-GNA13 LRRC37A3 chr17 62914868 - GNA13 chr17 63014421 - Exonic hg19 BRCA TCGA-BH-A1F6-01A 3 6 5'UTR-CDS Intra-chr q24.1 q24.1 Seq+ 20176 ChimerSeq STARFusion TCGA_RNA-Seq PELI1-APLF PELI1 chr2 64371215 - APLF chr2 68794473 + Exonic hg19 BRCA TCGA-BH-A1F6-01A 3 4 5'UTR-CDS Intra-chr p14 p13.3 Seq+ 20177 ChimerSeq STARFusion TCGA_RNA-Seq KIF13B-INTS9 KIF13B chr8 28988050 - INTS9 chr8 28717080 - Exonic hg19 BRCA TCGA-BH-A1F6-01A 2 4 In-Frame Intra-chr p12 p21.1 20178 ChimerSeq STARFusion TCGA_RNA-Seq FRK-DTNBP1 FRK chr6 116381131 - DTNBP1 chr6 15533626 - Exonic hg19 BRCA TCGA-AQ-A1H2-01A 6 6 Out-of-frame Intra-chr q22.1 TK:Src Tumor suppressor gene p22.3 Seq+ 20179 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 BRCA TCGA-AQ-A1H2-01A 2 1 In-Frame Intra-chr p11.21 p11.21 20180 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D4-COMMD6 TBC1D4 chr13 76055406 - COMMD6 chr13 76104402 - Exonic hg19 BRCA TCGA-OL-A5S0-01A 9 65 In-Frame Intra-chr q22.2 q22.2 Seq+ 20181 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D4-COMMD6 TBC1D4 chr13 76055410 - COMMD6 chr13 76100779 - Exonic hg19 BRCA TCGA-OL-A5S0-01A 6 65 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 20182 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D4-COMMD6 TBC1D4 chr13 76055408 - COMMD6 chr13 76104404 - Exonic hg19 BRCA TCGA-OL-A5S0-01A 5 65 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 20183 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D4-COMMD6 TBC1D4 chr13 76055406 - COMMD6 chr13 76100775 - Exonic hg19 BRCA TCGA-OL-A5S0-01A 5 65 In-Frame Intra-chr q22.2 q22.2 Seq+ 20184 ChimerSeq STARFusion TCGA_RNA-Seq MNAT1-PCNXL4 MNAT1 chr14 61264878 + PCNXL4 chr14 60600688 + Exonic hg19 BRCA TCGA-OL-A5S0-01A 2 5 Out-of-frame Intra-chr q23.1 20185 ChimerSeq STARFusion TCGA_RNA-Seq ASXL2-ITSN2 ASXL2 chr2 26022254 - ITSN2 chr2 24538093 - Exonic hg19 BRCA TCGA-D8-A145-01A 3 12 In-Frame Intra-chr p23.3 p23.3 20186 ChimerSeq STARFusion TCGA_RNA-Seq SPG7-HNRNPH1 SPG7 chr16 89597216 + HNRNPH1 chr5 179043219 - Exonic hg19 BRCA TCGA-D8-A145-01A 2 0 Out-of-frame Inter-chr q24.3 q35.3 20187 ChimerSeq STARFusion TCGA_RNA-Seq DPM1-EZR DPM1 chr20 49574900 - EZR chr6 159197536 - Exonic hg19 BRCA TCGA-BH-A0B2-01A 6 35 In-Frame Inter-chr q13.13 q25.3 Seq+ 20188 ChimerSeq STARFusion TCGA_RNA-Seq NCOR1-DPM1 NCOR1 chr17 16055260 - DPM1 chr20 49571822 - Exonic hg19 BRCA TCGA-BH-A0B2-01A 6 31 In-Frame Inter-chr p11.2 Oncogene q13.13 Seq+ 20189 ChimerSeq STARFusion TCGA_RNA-Seq TNRC18-ZC3HAV1 TNRC18 chr7 5463072 - ZC3HAV1 chr7 138768778 - Exonic hg19 BRCA TCGA-BH-A0B2-01A 7 17 5'UTR-CDS Intra-chr p22.1 q34 Seq+ 20190 ChimerSeq STARFusion TCGA_RNA-Seq TNRC18-ZC3HAV1 TNRC18 chr7 5460691 - ZC3HAV1 chr7 138768778 - Exonic hg19 BRCA TCGA-BH-A0B2-01A 2 17 Out-of-frame Intra-chr p22.1 q34 Seq+ 20191 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R21-WARS2 PPP1R21 chr2 48725874 + WARS2 chr1 119619230 - Exonic hg19 BRCA TCGA-BH-A0B2-01A 2 8 In-Frame Inter-chr p16.3 p12 Seq+ 20192 ChimerSeq STARFusion TCGA_RNA-Seq MSMO1-DDX60 MSMO1 chr4 166248916 + DDX60 chr4 169143032 - Exonic hg19 BRCA TCGA-BH-A0B2-01A 2 6 5'UTR-CDS Intra-chr q32.3 q32.3 Seq+ 20193 ChimerSeq STARFusion TCGA_RNA-Seq SPAG9-SKAP1 SPAG9 chr17 49156945 - SKAP1 chr17 46266862 - Exonic hg19 BRCA TCGA-EW-A1OV-01A 11 67 In-Frame Intra-chr q21.33 q21.32 Seq+ 20194 ChimerSeq STARFusion TCGA_RNA-Seq KCNMA1-ECD KCNMA1 chr10 78943179 - ECD chr10 74923708 - Exonic hg19 BRCA TCGA-EW-A1OV-01A 4 14 CDS-5'UTR Intra-chr q22.3 q22.2 Seq+ 20195 ChimerSeq STARFusion TCGA_RNA-Seq ACSL6-IGKC ACSL6 chr5 131289862 - IGKC chr2 89160427 - Exonic hg19 BRCA TCGA-EW-A1OV-01A 7 0 Out-of-frame Inter-chr q31.1 p11.2 20196 ChimerSeq STARFusion TCGA_RNA-Seq ACSL6-IGKJ4 ACSL6 chr5 131289862 - IGKJ4 chr2 89160427 - Exonic hg19 BRCA TCGA-EW-A1OV-01A 7 0 Out-of-frame Inter-chr q31.1 p11.2 20197 ChimerSeq STARFusion TCGA_RNA-Seq SGMS1-PSMB2 SGMS1 chr10 52193236 - PSMB2 chr1 36102033 - Exonic hg19 BRCA TCGA-EW-A1OV-01A 4 11 5'UTR-CDS Inter-chr q11.23 Tumor suppressor gene p34.3 Seq+ 20198 ChimerSeq STARFusion TCGA_RNA-Seq PCNXL2-COG2 PCNXL2 chr1 233296029 - COG2 chr1 230819320 + Exonic hg19 BRCA TCGA-EW-A1OV-01A 3 7 Out-of-frame Intra-chr q42.2 Seq+ 20199 ChimerSeq STARFusion TCGA_RNA-Seq SLC30A7-HHIPL2 SLC30A7 chr1 101379362 + HHIPL2 chr1 222705453 - Exonic hg19 BRCA TCGA-EW-A1OV-01A 4 3 Out-of-frame Intra-chr p21.2 q41 Seq+ 20200 ChimerSeq STARFusion TCGA_RNA-Seq COG2-PCNXL2 COG2 chr1 230814798 + PCNXL2 chr1 233275601 - Exonic hg19 BRCA TCGA-EW-A1OV-01A 2 6 Out-of-frame Intra-chr q42.2 Seq+ 20201 ChimerSeq STARFusion TCGA_RNA-Seq WWP1-CPB2 WWP1 chr8 87474075 + CPB2 chr13 46661955 - Exonic hg19 BRCA TCGA-E2-A1LG-01A 36 132 In-Frame Inter-chr q21.3 q14.13 Seq+ 20202 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC10-BRWD1 TRAPPC10 chr21 45432441 + BRWD1 chr21 40630598 - Exonic hg19 BRCA TCGA-E2-A1LG-01A 38 42 In-Frame Intra-chr q22.3 q22.2 Seq+ 20203 ChimerSeq STARFusion TCGA_RNA-Seq DSCR3-IGSF5 DSCR3 chr21 38639539 - IGSF5 chr21 41137462 + Exonic hg19 BRCA TCGA-E2-A1LG-01A 5 10 Out-of-frame Intra-chr q22.13 q22.2 Seq+ 20204 ChimerSeq STARFusion TCGA_RNA-Seq ZFP90-CDH1 ZFP90 chr16 68573728 + CDH1 chr16 68835573 + Exonic hg19 BRCA TCGA-E2-A1LG-01A 4 12 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Oncogene Tumor suppressor gene 20205 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT3-TRAPPC10 AGPAT3 chr21 45285226 + TRAPPC10 chr21 45451972 + Exonic hg19 BRCA TCGA-E2-A1LG-01A 2 1 5'UTR-CDS Intra-chr q22.3 q22.3 20206 ChimerSeq STARFusion TCGA_RNA-Seq PGLYRP3-SPRR2G PGLYRP3 chr1 153283087 - SPRR2G chr1 153122607 - Exonic hg19 BRCA TCGA-E2-A1LG-01A 2 1 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 20207 ChimerSeq STARFusion TCGA_RNA-Seq ZNF738-DAPK1 ZNF738 chr19 21558766 + DAPK1 chr9 90311922 + Exonic hg19 BRCA TCGA-E2-A1LG-01A 2 0 5'UTR-CDS Inter-chr p12 q21.33 CAMK:DAPK Tumor suppressor gene 20208 ChimerSeq STARFusion TCGA_RNA-Seq ZMYND8-GTPBP1 ZMYND8 chr20 45848909 - GTPBP1 chr22 39111912 + Exonic hg19 BRCA TCGA-EW-A1PF-01A 28 153 In-Frame Inter-chr q13.12 q13.1 Seq+ 20209 ChimerSeq STARFusion TCGA_RNA-Seq NCOA6-RALGAPA2 NCOA6 chr20 33334611 - RALGAPA2 chr20 20570009 - Exonic hg19 BRCA TCGA-EW-A1PF-01A 4 13 In-Frame Intra-chr q11.22 p11.23 Seq+ 20210 ChimerSeq STARFusion TCGA_RNA-Seq BTBD3-GCNT2 BTBD3 chr20 11900484 + GCNT2 chr6 10621584 + Exonic hg19 BRCA TCGA-EW-A1PF-01A 4 4 Out-of-frame Inter-chr p12.2 p24.3 Seq+ 20211 ChimerSeq STARFusion TCGA_RNA-Seq CHD6-CCDC90A CHD6 chr20 40246979 - CCDC90A chr6 13807276 - Exonic hg19 BRCA TCGA-EW-A1PF-01A 3 4 5'UTR-CDS Inter-chr q12 Seq+ 20212 ChimerSeq STARFusion TCGA_RNA-Seq SAMD12-USP37 SAMD12 chr8 119452071 - USP37 chr2 219411814 - Exonic hg19 BRCA TCGA-EW-A1PF-01A 2 5 Out-of-frame Inter-chr q24.12 q35 Seq+ 20213 ChimerSeq STARFusion TCGA_RNA-Seq GFOD1-BCAS1 GFOD1 chr6 13486870 - BCAS1 chr20 52645511 - Exonic hg19 BRCA TCGA-EW-A1PF-01A 2 4 In-Frame Inter-chr p23 q13.2 Seq+ 20214 ChimerSeq STARFusion TCGA_RNA-Seq RANBP9-CDKAL1 RANBP9 chr6 13697017 - CDKAL1 chr6 20955650 + Exonic hg19 BRCA TCGA-EW-A1PF-01A 3 0 Out-of-frame Intra-chr p23 Tumor suppressor gene p22.3 Seq+ 20215 ChimerSeq STARFusion TCGA_RNA-Seq BCAS1-KIF16B BCAS1 chr20 52644931 - KIF16B chr20 16509085 - Exonic hg19 BRCA TCGA-EW-A1PF-01A 2 3 Out-of-frame Intra-chr q13.2 p12.1 Seq+ 20216 ChimerSeq STARFusion TCGA_RNA-Seq TMED3-KIAA1024 TMED3 chr15 79606347 + KIAA1024 chr15 79748440 + Exonic hg19 BRCA TCGA-EW-A1PF-01A 2 0 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 20217 ChimerSeq STARFusion TCGA_RNA-Seq ASNS-CEP104 ASNS chr7 97501663 - CEP104 chr1 3743000 - Exonic hg19 BRCA TCGA-BH-A0DO-01B 2 0 5'UTR-CDS Inter-chr q21.3 p36.32 20218 ChimerSeq STARFusion TCGA_RNA-Seq DMTF1-RUNDC3B DMTF1 chr7 86781871 + RUNDC3B chr7 87369107 + Exonic hg19 BRCA TCGA-BH-A0DO-01B 2 0 5'UTR-CDS Intra-chr q21.12 Tumor suppressor gene Transcription factor q21.12 20219 ChimerSeq STARFusion TCGA_RNA-Seq KAT6A-KIF13B KAT6A chr8 41909419 - KIF13B chr8 29102956 - Exonic hg19 BRCA TCGA-BH-A0DO-01B 2 0 5'UTR-CDS Intra-chr p11.21 Oncogene p12 Seq+ 20220 ChimerSeq STARFusion TCGA_RNA-Seq XRRA1-RNF169 XRRA1 chr11 74559160 - RNF169 chr11 74545721 + Exonic hg19 BRCA TCGA-BH-A0BD-01A 23 51 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 20221 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-KCTD14 UVRAG chr11 75776832 + KCTD14 chr11 77728316 - Exonic hg19 BRCA TCGA-BH-A0BD-01A 7 33 In-Frame Intra-chr q13.5 Tumor suppressor gene q14.1 Seq+ 20222 ChimerSeq STARFusion TCGA_RNA-Seq CCS-KDM2A CCS chr11 66368020 + KDM2A chr11 66916526 + Exonic hg19 BRCA TCGA-BH-A0BD-01A 7 27 CDS-5'UTR Intra-chr q13.2 q13.2 Transcription factor Seq+ 20223 ChimerSeq STARFusion TCGA_RNA-Seq CCS-KDM2A CCS chr11 66368020 + KDM2A chr11 66947550 + Exonic hg19 BRCA TCGA-BH-A0BD-01A 2 27 In-Frame Intra-chr q13.2 q13.2 Transcription factor Seq+ 20224 ChimerSeq STARFusion TCGA_RNA-Seq PDE10A-POLB PDE10A chr6 166075435 - POLB chr8 42229081 + Exonic hg19 BRCA TCGA-D8-A13Z-01A 54 223 In-Frame Inter-chr q27 p11.21 Seq+ 20225 ChimerSeq STARFusion TCGA_RNA-Seq PDE10A-POLB PDE10A chr6 165989900 - POLB chr8 42229081 + Exonic hg19 BRCA TCGA-D8-A13Z-01A 22 223 3'UTR-CDS Inter-chr q27 p11.21 Seq+ 20226 ChimerSeq STARFusion TCGA_RNA-Seq PRLR-PLCXD3 PRLR chr5 35230370 - PLCXD3 chr5 41382636 - Exonic hg19 BRCA TCGA-D8-A13Z-01A 12 56 5'UTR-CDS Intra-chr p13.2 p13.1 Seq+ 20227 ChimerSeq STARFusion TCGA_RNA-Seq FGFR2-CCDC6 FGFR2 chr10 123243212 - CCDC6 chr10 61612460 - Exonic hg19 BRCA TCGA-D8-A13Z-01A 9 36 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q21.2 Seq+ 20228 ChimerSeq STARFusion TCGA_RNA-Seq SKA2-LOC100507412 SKA2 chr17 57232317 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-D8-A13Z-01A 7 35 CDS-5'UTR Inter-chr q22 20229 ChimerSeq STARFusion TCGA_RNA-Seq PTPRA-ANAPC10 PTPRA chr20 3018775 + ANAPC10 chr4 145916755 - Exonic hg19 BRCA TCGA-D8-A13Z-01A 9 15 In-Frame Inter-chr p13 q31.21 Seq+ 20230 ChimerSeq STARFusion TCGA_RNA-Seq ARFIP1-FGB ARFIP1 chr4 153750878 + FGB chr4 155486960 + Exonic hg19 BRCA TCGA-D8-A13Z-01A 6 20 In-Frame Intra-chr q31.3 q31.3 Seq+ 20231 ChimerSeq STARFusion TCGA_RNA-Seq PCDHA11-ANKHD1 PCDHA11 chr5 140251079 + ANKHD1 chr5 139892948 + Exonic hg19 BRCA TCGA-D8-A13Z-01A 4 12 In-Frame Intra-chr q31.3 q31.3 Seq+ 20232 ChimerSeq STARFusion TCGA_RNA-Seq MTHFD1L-THEMIS MTHFD1L chr6 151355736 + THEMIS chr6 128040968 - Exonic hg19 BRCA TCGA-D8-A13Z-01A 4 9 In-Frame Intra-chr q25.1 Seq+ 20233 ChimerSeq STARFusion TCGA_RNA-Seq TMEM206-RCOR3 TMEM206 chr1 212583767 - RCOR3 chr1 211486766 + Exonic hg19 BRCA TCGA-D8-A13Z-01A 3 11 In-Frame Intra-chr q32.3 q32.2 Seq+ 20234 ChimerSeq STARFusion TCGA_RNA-Seq HECTD1-HEATR5A HECTD1 chr14 31642362 - HEATR5A chr14 31828263 - Exonic hg19 BRCA TCGA-D8-A13Z-01A 2 1 In-Frame Intra-chr q12 q12 Seq+ 20235 ChimerSeq STARFusion TCGA_RNA-Seq SCAMP2-SLC12A8 SCAMP2 chr15 75165540 - SLC12A8 chr3 124811042 - Exonic hg19 BRCA TCGA-D8-A27H-01A 12 95 Out-of-frame Inter-chr q24.1 q21.2 Seq+ 20236 ChimerSeq STARFusion TCGA_RNA-Seq RALBP1-TWSG1 RALBP1 chr18 9475689 + TWSG1 chr18 9337191 + Exonic hg19 BRCA TCGA-D8-A27H-01A 31 14 5'UTR-5'UTR Intra-chr p11.22 p11.22 Seq+ 20237 ChimerSeq STARFusion TCGA_RNA-Seq TARBP1-RBM34 TARBP1 chr1 234582549 - RBM34 chr1 235295312 - Exonic hg19 BRCA TCGA-D8-A27H-01A 13 77 Out-of-frame Intra-chr q42.2 q42.3 Seq+ 20238 ChimerSeq STARFusion TCGA_RNA-Seq COQ4-DNM1 COQ4 chr9 131085426 + DNM1 chr9 131012394 + Exonic hg19 BRCA TCGA-D8-A27H-01A 12 59 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 20239 ChimerSeq STARFusion TCGA_RNA-Seq IKZF1-LRBA IKZF1 chr7 50367353 + LRBA chr4 151207186 - Exonic hg19 BRCA TCGA-D8-A27H-01A 10 34 In-Frame Inter-chr p12.2 Oncogene Tumor suppressor gene Transcription factor q31.3 Seq+ 20240 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57842332 + Exonic hg19 BRCA TCGA-D8-A27H-01A 7 18 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 20241 ChimerSeq STARFusion TCGA_RNA-Seq PRCP-RAB30 PRCP chr11 82611277 - RAB30 chr11 82705164 - Exonic hg19 BRCA TCGA-D8-A27H-01A 4 16 In-Frame Intra-chr q14.1 q14.1 Seq+ 20242 ChimerSeq STARFusion TCGA_RNA-Seq MAML2-CNTN5 MAML2 chr11 95825056 - CNTN5 chr11 99715584 + Exonic hg19 BRCA TCGA-D8-A27H-01A 4 11 Out-of-frame Intra-chr q21 Oncogene q22.1 Seq+ 20243 ChimerSeq STARFusion TCGA_RNA-Seq C1orf198-AGT C1orf198 chr1 230979100 - AGT chr1 230846599 - Exonic hg19 BRCA TCGA-D8-A27H-01A 5 5 CDS-5'UTR Intra-chr q42.2 q42.2 Seq+ 20244 ChimerSeq STARFusion TCGA_RNA-Seq PRCP-RAB30 PRCP chr11 82611277 - RAB30 chr11 82698812 - Exonic hg19 BRCA TCGA-D8-A27H-01A 2 16 In-Frame Intra-chr q14.1 q14.1 Seq+ 20245 ChimerSeq STARFusion TCGA_RNA-Seq TMED3-KIAA1024 TMED3 chr15 79606347 + KIAA1024 chr15 79748440 + Exonic hg19 BRCA TCGA-D8-A27H-01A 5 3 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 20246 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-JARID2 KCTD20 chr6 36438034 + JARID2 chr6 15374348 + Exonic hg19 BRCA TCGA-D8-A27H-01A 4 3 Out-of-frame Intra-chr p21.31 p22.3 Seq+ 20247 ChimerSeq STARFusion TCGA_RNA-Seq NFIX-DAND5 NFIX chr19 13136366 + DAND5 chr19 13084203 + Exonic hg19 BRCA TCGA-D8-A27H-01A 2 11 Out-of-frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 20248 ChimerSeq STARFusion TCGA_RNA-Seq ESCO1-ABHD3 ESCO1 chr18 19140820 - ABHD3 chr18 19263926 - Exonic hg19 BRCA TCGA-D8-A27H-01A 3 6 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 20249 ChimerSeq STARFusion TCGA_RNA-Seq MYO6-MSR1 MYO6 chr6 76459140 + MSR1 chr8 16035501 - Exonic hg19 BRCA TCGA-D8-A27H-01A 3 3 5'UTR-5'UTR Inter-chr q14.1 p22 Seq+ 20250 ChimerSeq STARFusion TCGA_RNA-Seq LOC100616530-DPY19L4 LOC100616530 chr8 96281118 + DPY19L4 chr8 95789894 + Exonic hg19 BRCA TCGA-D8-A27H-01A 2 1 5'UTR-CDS Intra-chr q22.1 20251 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983374 - RSRC2 chr12 122990253 - Exonic hg19 BRCA TCGA-EW-A1P1-01A 60 200 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 20252 ChimerSeq STARFusion TCGA_RNA-Seq FLJ22447-PRKCH FLJ22447 chr14 62037478 + PRKCH chr14 61909829 + Exonic hg19 BRCA TCGA-EW-A1P1-01A 3 30 5'UTR-CDS Intra-chr q23.1 q23.1 20253 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF3-PIK3AP1 TM9SF3 chr10 98346491 - PIK3AP1 chr10 98376468 - Exonic hg19 BRCA TCGA-AN-A0FX-01A 78 27 In-Frame Intra-chr q24.1 q24.1 Seq+ 20254 ChimerSeq STARFusion TCGA_RNA-Seq PPFIBP1-SMCO2 PPFIBP1 chr12 27731172 + SMCO2 chr12 27648613 + Exonic hg19 BRCA TCGA-AN-A0FX-01A 9 93 Out-of-frame Intra-chr p11.23 p11.23 20255 ChimerSeq STARFusion TCGA_RNA-Seq CHD8-RAB2B CHD8 chr14 21924191 - RAB2B chr14 21936911 - Exonic hg19 BRCA TCGA-AN-A0FX-01A 5 18 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 20256 ChimerSeq STARFusion TCGA_RNA-Seq CACNA1C-WNT5B CACNA1C chr12 2229596 + WNT5B chr12 1740464 + Exonic hg19 BRCA TCGA-AN-A0FX-01A 3 25 CDS-5'UTR Intra-chr p13.33 p13.33 Seq+ 20257 ChimerSeq STARFusion TCGA_RNA-Seq GGT6-PELP1 GGT6 chr17 4463677 - PELP1 chr17 4580107 - Exonic hg19 BRCA TCGA-AN-A0FX-01A 5 16 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 20258 ChimerSeq STARFusion TCGA_RNA-Seq ITM2B-RB1 ITM2B chr13 48833083 + RB1 chr13 49037867 + Exonic hg19 BRCA TCGA-AN-A0FX-01A 5 15 Out-of-frame Intra-chr q14.2 q14.2 Oncogene Tumor suppressor gene Seq+ 20259 ChimerSeq STARFusion TCGA_RNA-Seq PYCR1-NOTUM PYCR1 chr17 79893213 - NOTUM chr17 79916871 - Exonic hg19 BRCA TCGA-AN-A0FX-01A 4 19 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 20260 ChimerSeq STARFusion TCGA_RNA-Seq B9D1-MFAP4 B9D1 chr17 19274862 - MFAP4 chr17 19289777 - Exonic hg19 BRCA TCGA-AN-A0FX-01A 4 13 5'UTR-CDS Intra-chr p11.2 p11.2 20261 ChimerSeq STARFusion TCGA_RNA-Seq CPAMD8-SAP18 CPAMD8 chr19 17006987 - SAP18 chr13 21720944 + Exonic hg19 BRCA TCGA-AN-A0FX-01A 5 9 In-Frame Inter-chr p13.11 q12.11 Seq+ 20262 ChimerSeq STARFusion TCGA_RNA-Seq MAPT-MIR205HG MAPT chr17 43972052 + MIR205HG chr1 209602526 + Exonic hg19 BRCA TCGA-AC-A2QI-01A 2 1 5'UTR-5'UTR Inter-chr q32.2 20263 ChimerSeq STARFusion TCGA_RNA-Seq C20orf112-COMMD7 C20orf112 chr20 31071165 - COMMD7 chr20 31315949 - Exonic hg19 BRCA TCGA-E9-A5UP-01A 22 66 5'UTR-CDS Intra-chr q11.21 Seq+ 20264 ChimerSeq STARFusion TCGA_RNA-Seq C20orf112-COMMD7 C20orf112 chr20 31099150 - COMMD7 chr20 31315949 - Exonic hg19 BRCA TCGA-E9-A5UP-01A 6 66 In-Frame Intra-chr q11.21 Seq+ 20265 ChimerSeq STARFusion TCGA_RNA-Seq ZNFX1-CNBD2 ZNFX1 chr20 47886479 - CNBD2 chr20 34560551 + Exonic hg19 BRCA TCGA-E9-A5UP-01A 3 4 Out-of-frame Intra-chr q13.13 q11.23 Seq+ 20266 ChimerSeq STARFusion TCGA_RNA-Seq ALG8-NARS2 ALG8 chr11 77815026 - NARS2 chr11 78204241 - Exonic hg19 BRCA TCGA-A2-A0T4-01A 26 119 In-Frame Intra-chr q14.1 q14.1 Seq+ 20267 ChimerSeq STARFusion TCGA_RNA-Seq LRRC1-MLIP LRRC1 chr6 53660213 + MLIP chr6 53986245 + Exonic hg19 BRCA TCGA-A2-A0T4-01A 8 33 In-Frame Intra-chr p12.1 p12.1 Seq+ 20268 ChimerSeq STARFusion TCGA_RNA-Seq LRRC1-MLIP LRRC1 chr6 53660213 + MLIP chr6 53989271 + Exonic hg19 BRCA TCGA-A2-A0T4-01A 2 33 In-Frame Intra-chr p12.1 p12.1 Seq+ 20269 ChimerSeq STARFusion TCGA_RNA-Seq PRKRIR-FCHSD2 PRKRIR chr11 76072000 - FCHSD2 chr11 72794785 - Exonic hg19 BRCA TCGA-A2-A0T4-01A 4 8 Out-of-frame Intra-chr q13.4 20270 ChimerSeq STARFusion TCGA_RNA-Seq GSTA4-NADSYN1 GSTA4 chr6 52847372 - NADSYN1 chr11 71208529 + Exonic hg19 BRCA TCGA-A2-A0T4-01A 3 6 In-Frame Inter-chr p12.2 q13.4 Seq+ 20271 ChimerSeq STARFusion TCGA_RNA-Seq SCAF8-GINM1 SCAF8 chr6 155055064 + GINM1 chr6 149893421 + Exonic hg19 BRCA TCGA-A2-A0T4-01A 2 3 Out-of-frame Intra-chr q25.2 q25.1 Seq+ 20272 ChimerSeq STARFusion TCGA_RNA-Seq MVP-KIF22 MVP chr16 29851780 + KIF22 chr16 29814770 + Exonic hg19 BRCA TCGA-BH-A18V-06A 90 211 In-Frame Intra-chr p11.2 p11.2 Seq+ 20273 ChimerSeq STARFusion TCGA_RNA-Seq SARS-KIAA1324 SARS chr1 109766670 + KIAA1324 chr1 109704516 + Exonic hg19 BRCA TCGA-BH-A18V-06A 34 86 In-Frame Intra-chr p13.3 p13.3 Seq+ 20274 ChimerSeq STARFusion TCGA_RNA-Seq MPP2-PPY MPP2 chr17 41975630 - PPY chr17 42019022 - Exonic hg19 BRCA TCGA-BH-A18V-06A 34 34 CDS-5'UTR Intra-chr q21.31 q21.31 Seq+ 20275 ChimerSeq STARFusion TCGA_RNA-Seq RIMS2-BAALC RIMS2 chr8 104513290 + BAALC chr8 104225147 + Exonic hg19 BRCA TCGA-BH-A18V-06A 20 45 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 20276 ChimerSeq STARFusion TCGA_RNA-Seq CP-SOX5 CP chr3 148939434 - SOX5 chr12 23999127 - Exonic hg19 BRCA TCGA-BH-A18V-06A 8 46 Out-of-frame Inter-chr q25.1 p12.1 Transcription factor Seq+ 20277 ChimerSeq STARFusion TCGA_RNA-Seq RIMS2-BAALC RIMS2 chr8 104513290 + BAALC chr8 104240217 + Exonic hg19 BRCA TCGA-BH-A18V-06A 6 45 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 20278 ChimerSeq STARFusion TCGA_RNA-Seq FOXP1-EIF4E3 FOXP1 chr3 71542577 - EIF4E3 chr3 71777774 - Exonic hg19 BRCA TCGA-BH-A18V-06A 4 27 5'UTR-5'UTR Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor p13 Seq+ 20279 ChimerSeq STARFusion TCGA_RNA-Seq PKM-TRPV3 PKM chr15 72502014 - TRPV3 chr17 3439007 - Exonic hg19 BRCA TCGA-BH-A18V-06A 5 20 Out-of-frame Inter-chr q23 p13.2 Seq+ 20280 ChimerSeq STARFusion TCGA_RNA-Seq FOXP1-EIF4E3 FOXP1 chr3 71542577 - EIF4E3 chr3 71759635 - Exonic hg19 BRCA TCGA-BH-A18V-06A 3 27 5'UTR-5'UTR Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor p13 Seq+ 20281 ChimerSeq STARFusion TCGA_RNA-Seq SHFM1-ADCY2 SHFM1 chr7 96339000 - ADCY2 chr5 7773045 + Exonic hg19 BRCA TCGA-BH-A18V-06A 5 16 Out-of-frame Inter-chr p15.31 Seq+ 20282 ChimerSeq STARFusion TCGA_RNA-Seq LOC100289561-CUX1 LOC100289561 chr7 102016769 + CUX1 chr7 101671378 + Exonic hg19 BRCA TCGA-BH-A18V-06A 4 13 Out-of-frame Intra-chr q22.1 Tumor suppressor gene Transcription factor 20283 ChimerSeq STARFusion TCGA_RNA-Seq LOC100630923-CUX1 LOC100630923 chr7 102016769 + CUX1 chr7 101671378 + Exonic hg19 BRCA TCGA-BH-A18V-06A 4 13 5'UTR-CDS Intra-chr q22.1 Tumor suppressor gene Transcription factor 20284 ChimerSeq STARFusion TCGA_RNA-Seq PKM-TRPV3 PKM chr15 72502014 - TRPV3 chr17 3436231 - Exonic hg19 BRCA TCGA-BH-A18V-06A 2 20 Out-of-frame Inter-chr q23 p13.2 Seq+ 20285 ChimerSeq STARFusion TCGA_RNA-Seq EYA3-KIAA0247 EYA3 chr1 28362055 - KIAA0247 chr14 70125230 + Exonic hg19 BRCA TCGA-BH-A18V-06A 4 8 CDS-5'UTR Inter-chr p35.3 Seq+ 20286 ChimerSeq STARFusion TCGA_RNA-Seq NAGA-TCF20 NAGA chr22 42456928 - TCF20 chr22 42575708 - Exonic hg19 BRCA TCGA-BH-A18V-06A 5 4 In-Frame Intra-chr q13.2 Transcription factor Seq+ 20287 ChimerSeq STARFusion TCGA_RNA-Seq RUNX2-IFT88 RUNX2 chr6 45459851 + IFT88 chr13 21264844 + Exonic hg19 BRCA TCGA-BH-A18V-06A 3 12 In-Frame Inter-chr p21.1 Tumor suppressor gene Transcription factor q12.11 Tumor suppressor gene Seq+ 20288 ChimerSeq STARFusion TCGA_RNA-Seq ITPKC-SPTBN4 ITPKC chr19 41231344 + SPTBN4 chr19 41071329 + Exonic hg19 BRCA TCGA-BH-A18V-06A 3 11 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 20289 ChimerSeq STARFusion TCGA_RNA-Seq DTNB-ASXL2 DTNB chr2 25818955 - ASXL2 chr2 25973282 - Exonic hg19 BRCA TCGA-BH-A18V-06A 2 9 Out-of-frame Intra-chr p23.3 p23.3 Seq+ 20290 ChimerSeq STARFusion TCGA_RNA-Seq SH2B3-CUX2 SH2B3 chr12 111844081 + CUX2 chr12 111757816 + Exonic hg19 BRCA TCGA-BH-A18V-06A 2 5 5'UTR-CDS Intra-chr q24.12 Tumor suppressor gene q24.11 Transcription factor Seq+ 20291 ChimerSeq STARFusion TCGA_RNA-Seq LOC728730-ARHGEF33 LOC728730 chr2 39745851 + ARHGEF33 chr2 39171042 + Exonic hg19 BRCA TCGA-BH-A18V-06A 2 4 5'UTR-CDS Intra-chr p22.1 20292 ChimerSeq STARFusion TCGA_RNA-Seq NAGA-TCF20 NAGA chr22 42458831 - TCF20 chr22 42575708 - Exonic hg19 BRCA TCGA-BH-A18V-06A 2 4 In-Frame Intra-chr q13.2 Transcription factor Seq+ 20293 ChimerSeq STARFusion TCGA_RNA-Seq PPIE-MACF1 PPIE chr1 40218724 + MACF1 chr1 39888046 + Exonic hg19 BRCA TCGA-BH-A18V-06A 2 4 In-Frame Intra-chr p34.2 p34.3 20294 ChimerSeq STARFusion TCGA_RNA-Seq ST6GAL1-RPL39L ST6GAL1 chr3 186769134 + RPL39L chr3 186839116 - Exonic hg19 BRCA TCGA-BH-A18V-06A 2 1 CDS-5'UTR Intra-chr q27.3 q27.3 20295 ChimerSeq STARFusion TCGA_RNA-Seq FBXW7-MGST2 FBXW7 chr4 153268082 - MGST2 chr4 140661366 + Exonic hg19 BRCA TCGA-A1-A0SP-01A 7 15 CDS-3'UTR Intra-chr q31.3 Oncogene Tumor suppressor gene q31.1 Seq+ 20296 ChimerSeq STARFusion TCGA_RNA-Seq PTEN-WNK1 PTEN chr10 89685314 + WNK1 chr12 922808 + Exonic hg19 BRCA TCGA-A1-A0SP-01A 8 4 Out-of-frame Inter-chr q23.31 Oncogene Tumor suppressor gene p13.33 Seq+ 20297 ChimerSeq STARFusion TCGA_RNA-Seq NUBP1-UMODL1 NUBP1 chr16 10851884 + UMODL1 chr21 43508404 + Exonic hg19 BRCA TCGA-A1-A0SP-01A 3 15 In-Frame Inter-chr p13.13 q22.3 Seq+ 20298 ChimerSeq STARFusion TCGA_RNA-Seq EIF3E-LAPTM4B EIF3E chr8 109260842 - LAPTM4B chr8 98817581 + Exonic hg19 BRCA TCGA-A1-A0SP-01A 2 1 In-Frame Intra-chr q23.1 q22.1 20299 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-ZNF890P PUM1 chr1 31447498 - ZNF890P chr7 5167374 - Exonic hg19 BRCA TCGA-A8-A08R-01A 16 41 CDS-3'UTR Inter-chr p35.2 p22.1 Seq+ 20300 ChimerSeq STARFusion TCGA_RNA-Seq TMEM181-HMGCLL1 TMEM181 chr6 159029782 + HMGCLL1 chr6 55304357 - Exonic hg19 BRCA TCGA-A8-A08R-01A 16 17 Out-of-frame Intra-chr q25.3 p12.1 Seq+ 20301 ChimerSeq STARFusion TCGA_RNA-Seq SS18L1-GID8 SS18L1 chr20 60735017 + GID8 chr20 61574847 + Exonic hg19 BRCA TCGA-A8-A08R-01A 12 30 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 20302 ChimerSeq STARFusion TCGA_RNA-Seq LMNB2-GNG7 LMNB2 chr19 2444402 - GNG7 chr19 2555186 - Exonic hg19 BRCA TCGA-A8-A08R-01A 11 31 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 20303 ChimerSeq STARFusion TCGA_RNA-Seq CANT1-LOC100507412 CANT1 chr17 77005746 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-A8-A08R-01A 8 3 5'UTR-5'UTR Inter-chr q25.3 20304 ChimerSeq STARFusion TCGA_RNA-Seq ABL2-C14orf64 ABL2 chr1 179089325 - C14orf64 chr14 98435884 - Exonic hg19 BRCA TCGA-A8-A08R-01A 3 17 CDS-3'UTR Inter-chr q25.2 TK:Abl Oncogene 20305 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-ZNF815P PUM1 chr1 31447498 - ZNF815P chr7 5879580 + Exonic hg19 BRCA TCGA-A8-A08R-01A 2 21 CDS-5'UTR Inter-chr p35.2 p22.1 20306 ChimerSeq STARFusion TCGA_RNA-Seq TNS4-LOC100507412 TNS4 chr17 38657786 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-A8-A08R-01A 5 4 5'UTR-5'UTR Inter-chr q21.2 20307 ChimerSeq STARFusion TCGA_RNA-Seq LCOR-TNFRSF21 LCOR chr10 98593236 + TNFRSF21 chr6 47202634 - Exonic hg19 BRCA TCGA-A8-A08R-01A 5 3 5'UTR-CDS Inter-chr q24.1 Transcription factor p12.3 20308 ChimerSeq STARFusion TCGA_RNA-Seq LGALS3BP-LOC100507412 LGALS3BP chr17 76975906 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-A8-A08R-01A 3 8 5'UTR-5'UTR Inter-chr q25.3 20309 ChimerSeq STARFusion TCGA_RNA-Seq SHB-EXOSC3 SHB chr9 38067926 - EXOSC3 chr9 37784060 - Exonic hg19 BRCA TCGA-A8-A08R-01A 5 0 In-Frame Intra-chr p13.1 p13.2 20310 ChimerSeq STARFusion TCGA_RNA-Seq ARRB2-PLOD1 ARRB2 chr17 4621215 + PLOD1 chr1 12024232 + Exonic hg19 BRCA TCGA-A8-A08R-01A 4 0 Out-of-frame Inter-chr p13.2 p36.22 20311 ChimerSeq STARFusion TCGA_RNA-Seq CANT1-DDX11L2 CANT1 chr17 77005746 - DDX11L2 chr2 114358403 - Exonic hg19 BRCA TCGA-A8-A08R-01A 2 1 5'UTR-3'UTR Inter-chr q25.3 q14.1 20312 ChimerSeq STARFusion TCGA_RNA-Seq CSE1L-ZFAS1 CSE1L chr20 47675085 + ZFAS1 chr20 47905582 + Exonic hg19 BRCA TCGA-A8-A08R-01A 2 1 Out-of-frame Intra-chr q13.13 q13.13 Tumor suppressor gene 20313 ChimerSeq STARFusion TCGA_RNA-Seq EIF3B-MAD1L1 EIF3B chr7 2416710 + MAD1L1 chr7 2041756 - Exonic hg19 BRCA TCGA-A8-A08R-01A 2 1 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene 20314 ChimerSeq STARFusion TCGA_RNA-Seq TNFRSF21-LCOR TNFRSF21 chr6 47220992 - LCOR chr10 98593163 + Exonic hg19 BRCA TCGA-A8-A08R-01A 2 1 CDS-5'UTR Inter-chr p12.3 q24.1 Transcription factor 20315 ChimerSeq STARFusion TCGA_RNA-Seq ARFGEF1-CPA6 ARFGEF1 chr8 68255399 - CPA6 chr8 68334926 - Exonic hg19 BRCA TCGA-E2-A14Y-01A 21 60 In-Frame Intra-chr q13.2 q13.2 Seq+ 20316 ChimerSeq STARFusion TCGA_RNA-Seq PSMB3-CWC25 PSMB3 chr17 36912243 + CWC25 chr17 36971350 - Exonic hg19 BRCA TCGA-E2-A14Y-01A 12 89 In-Frame Intra-chr q12 Seq+ 20317 ChimerSeq STARFusion TCGA_RNA-Seq TMEM97-IFT20 TMEM97 chr17 26646391 + IFT20 chr17 26657554 - Exonic hg19 BRCA TCGA-E2-A14Y-01A 9 27 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 20318 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80954857 - MRPS28 chr8 80831385 - Exonic hg19 BRCA TCGA-E2-A14Y-01A 3 16 Out-of-frame Intra-chr q21.13 q21.13 20319 ChimerSeq STARFusion TCGA_RNA-Seq MED1-RHBDL3 MED1 chr17 37604051 - RHBDL3 chr17 30615811 + Exonic hg19 BRCA TCGA-E2-A14Y-01A 5 7 In-Frame Intra-chr q12 Tumor suppressor gene q11.2 Seq+ 20320 ChimerSeq STARFusion TCGA_RNA-Seq MAP2K3-NKAIN3 MAP2K3 chr17 21188281 + NKAIN3 chr8 63492098 + Exonic hg19 BRCA TCGA-E2-A14Y-01A 2 16 Out-of-frame Inter-chr p11.2 STE:STE7 q12.3 Seq+ 20321 ChimerSeq STARFusion TCGA_RNA-Seq ZNF219-HNRNPC ZNF219 chr14 21566471 - HNRNPC chr14 21702388 - Exonic hg19 BRCA TCGA-B6-A0I6-01A 40 8 5'UTR-5'UTR Intra-chr q11.2 Transcription factor q11.2 Seq+ 20322 ChimerSeq STARFusion TCGA_RNA-Seq ENG-AK1 ENG chr9 130605373 - AK1 chr9 130630791 - Exonic hg19 BRCA TCGA-B6-A0I6-01A 23 59 In-Frame Intra-chr q34.11 q34.11 Seq+ 20323 ChimerSeq STARFusion TCGA_RNA-Seq CDKAL1-RBM24 CDKAL1 chr6 20955816 + RBM24 chr6 17291987 + Exonic hg19 BRCA TCGA-B6-A0I6-01A 8 41 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 20324 ChimerSeq STARFusion TCGA_RNA-Seq MET-CAV1 MET chr7 116312631 + CAV1 chr7 116199000 + Exonic hg19 BRCA TCGA-B6-A0I6-01A 6 31 5'UTR-CDS Intra-chr q31.2 TK:Met Oncogene q31.2 Tumor suppressor gene Seq+ 20325 ChimerSeq STARFusion TCGA_RNA-Seq FBXW4-MGEA5 FBXW4 chr10 103427643 - MGEA5 chr10 103553755 - Exonic hg19 BRCA TCGA-B6-A0I6-01A 3 19 Out-of-frame Intra-chr q24.32 q24.32 Seq+ 20326 ChimerSeq STARFusion TCGA_RNA-Seq NUDT9-FAM13A NUDT9 chr4 88370405 + FAM13A chr4 89912301 - Exonic hg19 BRCA TCGA-B6-A0I6-01A 5 5 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 20327 ChimerSeq STARFusion TCGA_RNA-Seq COPZ1-HOXC4 COPZ1 chr12 54718965 + HOXC4 chr12 54448044 + Exonic hg19 BRCA TCGA-B6-A0I6-01A 4 2 In-Frame Intra-chr q13.13 q13.13 Transcription factor Seq+ 20328 ChimerSeq STARFusion TCGA_RNA-Seq DHRS12-LINC00282 DHRS12 chr13 52373670 - LINC00282 chr13 52412689 - Exonic hg19 BRCA TCGA-B6-A0I6-01A 2 6 CDS-3'UTR Intra-chr q14.3 q14.3 20329 ChimerSeq STARFusion TCGA_RNA-Seq VAMP3-PTCHD2 VAMP3 chr1 7837378 + PTCHD2 chr1 11561047 + Exonic hg19 BRCA TCGA-B6-A0I6-01A 2 1 CDS-5'UTR Intra-chr p36.23 20330 ChimerSeq STARFusion TCGA_RNA-Seq NPDC1-ARFGAP2 NPDC1 chr9 139940330 - ARFGAP2 chr11 47193884 - Exonic hg19 BRCA TCGA-B6-A0I6-01A 2 0 In-Frame Inter-chr q34.3 p11.2 20331 ChimerSeq STARFusion TCGA_RNA-Seq ANXA2-RNF114 ANXA2 chr15 60643392 - RNF114 chr20 48565785 + Exonic hg19 BRCA TCGA-C8-A12P-01A 628 2564 In-Frame Inter-chr q22.2 q13.13 Seq+ 20332 ChimerSeq STARFusion TCGA_RNA-Seq ERC1-TOMM34 ERC1 chr12 1517413 + TOMM34 chr20 43572220 - Exonic hg19 BRCA TCGA-C8-A12P-01A 29 78 Out-of-frame Inter-chr q13.12 Seq+ 20333 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-IKZF3 WIPF2 chr17 38421398 + IKZF3 chr17 37949186 - Exonic hg19 BRCA TCGA-C8-A12P-01A 19 93 In-Frame Intra-chr q21.2 q21.1 Tumor suppressor gene Transcription factor Seq+ 20334 ChimerSeq STARFusion TCGA_RNA-Seq NR2F2-MSI2 NR2F2 chr15 96869581 + MSI2 chr17 55607037 + Exonic hg19 BRCA TCGA-C8-A12P-01A 16 89 Out-of-frame Inter-chr q26.2 Transcription factor q22 Seq+ 20335 ChimerSeq STARFusion TCGA_RNA-Seq BPTF-PIP4K2B BPTF chr17 65822453 + PIP4K2B chr17 36943173 - Exonic hg19 BRCA TCGA-C8-A12P-01A 10 96 Out-of-frame Intra-chr q24.2 Transcription factor q12 Seq+ 20336 ChimerSeq STARFusion TCGA_RNA-Seq PSMD12-PRKCA PSMD12 chr17 65340722 - PRKCA chr17 64492319 + Exonic hg19 BRCA TCGA-C8-A12P-01A 14 35 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 20337 ChimerSeq STARFusion TCGA_RNA-Seq CYB561-GNA13 CYB561 chr17 61523606 - GNA13 chr17 63049846 - Exonic hg19 BRCA TCGA-C8-A12P-01A 16 24 5'UTR-CDS Intra-chr q23.3 q24.1 Seq+ 20338 ChimerSeq STARFusion TCGA_RNA-Seq ROCK1-ABHD3 ROCK1 chr18 18690779 - ABHD3 chr18 19283708 - Exonic hg19 BRCA TCGA-C8-A12P-01A 11 32 In-Frame Intra-chr q11.1 AGC:DMPK q11.2 Seq+ 20339 ChimerSeq STARFusion TCGA_RNA-Seq MAPK6-USO1 MAPK6 chr15 52311573 + USO1 chr4 76731585 + Exonic hg19 BRCA TCGA-C8-A12P-01A 12 27 5'UTR-CDS Inter-chr q21.2 q21.1 Seq+ 20340 ChimerSeq STARFusion TCGA_RNA-Seq PSMD12-PRKCA PSMD12 chr17 65340722 - PRKCA chr17 64637473 + Exonic hg19 BRCA TCGA-C8-A12P-01A 6 34 In-Frame Intra-chr q24.2 q24.2 Seq+ 20341 ChimerSeq STARFusion TCGA_RNA-Seq MED13-TEX2 MED13 chr17 60064368 - TEX2 chr17 62291602 - Exonic hg19 BRCA TCGA-C8-A12P-01A 5 32 CDS-5'UTR Intra-chr q23.2 q23.3 Seq+ 20342 ChimerSeq STARFusion TCGA_RNA-Seq PSMD12-PRKCA PSMD12 chr17 65341861 - PRKCA chr17 64492319 + Exonic hg19 BRCA TCGA-C8-A12P-01A 2 34 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 20343 ChimerSeq STARFusion TCGA_RNA-Seq NEMF-C14orf182 NEMF chr14 50262509 - C14orf182 chr14 50459591 - Exonic hg19 BRCA TCGA-C8-A12P-01A 6 16 Out-of-frame Intra-chr q21.3 Seq+ 20344 ChimerSeq STARFusion TCGA_RNA-Seq ROCK1-ABHD3 ROCK1 chr18 18690779 - ABHD3 chr18 19282459 - Exonic hg19 BRCA TCGA-C8-A12P-01A 2 32 Out-of-frame Intra-chr q11.1 AGC:DMPK q11.2 Seq+ 20345 ChimerSeq STARFusion TCGA_RNA-Seq CYB561-GNA13 CYB561 chr17 61523259 - GNA13 chr17 63049846 - Exonic hg19 BRCA TCGA-C8-A12P-01A 3 24 5'UTR-CDS Intra-chr q23.3 q24.1 Seq+ 20346 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-CASC3 STARD3 chr17 37793484 + CASC3 chr17 38318006 + Exonic hg19 BRCA TCGA-C8-A12P-01A 7 8 5'UTR-CDS Intra-chr q12 q21.1 Seq+ 20347 ChimerSeq STARFusion TCGA_RNA-Seq ZNF345-HSF2BP ZNF345 chr19 37341870 + HSF2BP chr21 45012209 - Exonic hg19 BRCA TCGA-C8-A12P-01A 6 11 5'UTR-CDS Inter-chr q13.12 Transcription factor q22.3 Seq+ 20348 ChimerSeq STARFusion TCGA_RNA-Seq BACH2-IGH@ BACH2 chr6 91006199 - IGH@ chr14 106322322 - Exonic hg19 BRCA TCGA-C8-A12P-01A 6 7 Out-of-frame Inter-chr q15 Transcription factor 32.33 20349 ChimerSeq STARFusion TCGA_RNA-Seq BACH2-IGHM BACH2 chr6 91006199 - IGHM chr14 106322322 - Exonic hg19 BRCA TCGA-C8-A12P-01A 6 4 Out-of-frame Inter-chr q15 Transcription factor q32.33 Seq+ 20350 ChimerSeq STARFusion TCGA_RNA-Seq TMED3-PCMTD2 TMED3 chr15 79703982 + PCMTD2 chr20 62899240 + Exonic hg19 BRCA TCGA-C8-A12P-01A 3 13 3'UTR-CDS Inter-chr q25.1 Seq+ 20351 ChimerSeq STARFusion TCGA_RNA-Seq ZNF345-HSF2BP ZNF345 chr19 37341870 + HSF2BP chr21 45016760 - Exonic hg19 BRCA TCGA-C8-A12P-01A 3 11 5'UTR-CDS Inter-chr q13.12 Transcription factor q22.3 Seq+ 20352 ChimerSeq STARFusion TCGA_RNA-Seq ZNF585A-GRAMD1A ZNF585A chr19 37656497 - GRAMD1A chr19 35504445 + Exonic hg19 BRCA TCGA-C8-A12P-01A 2 14 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.11 Seq+ 20353 ChimerSeq STARFusion TCGA_RNA-Seq BACH2-IGH@ BACH2 chr6 91006199 - IGH@ chr14 106175001 - Exonic hg19 BRCA TCGA-C8-A12P-01A 3 7 Out-of-frame Inter-chr q15 Transcription factor 32.33 20354 ChimerSeq STARFusion TCGA_RNA-Seq TOMM34-ERC1 TOMM34 chr20 43580474 - ERC1 chr12 1553728 + Exonic hg19 BRCA TCGA-C8-A12P-01A 3 5 Out-of-frame Inter-chr q13.12 Seq+ 20355 ChimerSeq STARFusion TCGA_RNA-Seq ZFP41-ANGPT1 ZFP41 chr8 144333510 + ANGPT1 chr8 108334356 - Exonic hg19 BRCA TCGA-C8-A12P-01A 2 6 3'UTR-CDS Intra-chr q24.3 Transcription factor q23.1 Seq+ 20356 ChimerSeq STARFusion TCGA_RNA-Seq ZFP41-ANGPT1 ZFP41 chr8 144333510 + ANGPT1 chr8 108334356 - Exonic hg19 BRCA TCGA-C8-A12P-01A 2 6 3'UTR-CDS Intra-chr q24.3 Transcription factor q23.1 Seq+ 20357 ChimerSeq STARFusion TCGA_RNA-Seq ZNF740-SEPT9 ZNF740 chr12 53584281 + SEPT9 chr17 75494788 + Exonic hg19 BRCA TCGA-B6-A0I8-01A 71 1 Out-of-frame Inter-chr q13.13 Transcription factor 20358 ChimerSeq STARFusion TCGA_RNA-Seq CCNY-ZNF496 CCNY chr10 35790463 + ZNF496 chr1 247473758 - Exonic hg19 BRCA TCGA-B6-A0I8-01A 2 22 In-Frame Inter-chr p11.21 q44 Transcription factor Seq+ 20359 ChimerSeq STARFusion TCGA_RNA-Seq IPO11-CENPJ IPO11 chr5 61708756 + CENPJ chr13 25459524 - Exonic hg19 BRCA TCGA-B6-A0I8-01A 4 7 5'UTR-CDS Inter-chr q12.1 q12.13 Seq+ 20360 ChimerSeq STARFusion TCGA_RNA-Seq GPR98-POLR3G GPR98 chr5 89938858 + POLR3G chr5 89797723 + Exonic hg19 BRCA TCGA-B6-A0I8-01A 2 5 Out-of-frame Intra-chr q14.3 Seq+ 20361 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-ZMAT4 WHSC1L1 chr8 38172165 - ZMAT4 chr8 40389757 - Exonic hg19 BRCA TCGA-EW-A1IX-01A 49 240 Out-of-frame Intra-chr p11.23 Tumor suppressor gene p11.21 Transcription factor Seq+ 20362 ChimerSeq STARFusion TCGA_RNA-Seq AHI1-CHEK2 AHI1 chr6 135644300 - CHEK2 chr22 29121355 - Exonic hg19 BRCA TCGA-EW-A1IX-01A 3 16 In-Frame Inter-chr q23.3 q12.1 Oncogene Tumor suppressor gene Seq+ 20363 ChimerSeq STARFusion TCGA_RNA-Seq SNX14-NKAIN2 SNX14 chr6 86303297 - NKAIN2 chr6 124604151 + Exonic hg19 BRCA TCGA-EW-A1IX-01A 4 7 Out-of-frame Intra-chr q14.3 q22.31 Seq+ 20364 ChimerSeq STARFusion TCGA_RNA-Seq LINC00674-SUZ12 LINC00674 chr17 66110666 + SUZ12 chr17 30325677 + Exonic hg19 BRCA TCGA-A8-A076-01A 31 46 Out-of-frame Intra-chr q24.2 q11.2 Tumor suppressor gene 20365 ChimerSeq STARFusion TCGA_RNA-Seq ARFGAP1-LINC00674 ARFGAP1 chr20 61904272 + LINC00674 chr17 66110563 + Exonic hg19 BRCA TCGA-A8-A076-01A 8 38 Out-of-frame Inter-chr q13.33 q24.2 20366 ChimerSeq STARFusion TCGA_RNA-Seq LRRC37B-SUZ12 LRRC37B chr17 30349844 + SUZ12 chr17 30325677 + Exonic hg19 BRCA TCGA-A8-A076-01A 10 17 In-Frame Intra-chr q11.2 q11.2 Tumor suppressor gene Seq+ 20367 ChimerSeq STARFusion TCGA_RNA-Seq PCBP2-EEA1 PCBP2 chr12 53873315 + EEA1 chr12 93258763 - Exonic hg19 BRCA TCGA-A8-A076-01A 5 20 3'UTR-CDS Intra-chr q13.13 q22 Transcription factor Seq+ 20368 ChimerSeq STARFusion TCGA_RNA-Seq ZFP91-RAB6A ZFP91 chr11 58352357 + RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-A8-A076-01A 3 21 Out-of-frame Intra-chr q12.1 Transcription factor q13.4 Seq+ 20369 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-FBXL20 TANC2 chr17 61086987 + FBXL20 chr17 37459892 - Exonic hg19 BRCA TCGA-A8-A076-01A 7 2 Out-of-frame Intra-chr q23.2 q12 Seq+ 20370 ChimerSeq STARFusion TCGA_RNA-Seq PCBP2-EEA1 PCBP2 chr12 53865591 + EEA1 chr12 93258763 - Exonic hg19 BRCA TCGA-A8-A076-01A 2 20 Out-of-frame Intra-chr q13.13 q22 Transcription factor Seq+ 20371 ChimerSeq STARFusion TCGA_RNA-Seq KAT7-AXIN2 KAT7 chr17 47869395 + AXIN2 chr17 63554854 - Exonic hg19 BRCA TCGA-A8-A076-01A 3 14 CDS-5'UTR Intra-chr q21.33 Transcription factor q24.1 Tumor suppressor gene Seq+ 20372 ChimerSeq STARFusion TCGA_RNA-Seq MED24-CEP112 MED24 chr17 38209551 - CEP112 chr17 63957716 - Exonic hg19 BRCA TCGA-A8-A076-01A 3 13 Out-of-frame Intra-chr q21.1 q24.1 Seq+ 20373 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-ANKFN1 TANC2 chr17 61466905 + ANKFN1 chr17 54517688 + Exonic hg19 BRCA TCGA-A8-A076-01A 5 4 Out-of-frame Intra-chr q23.2 q22 Seq+ 20374 ChimerSeq STARFusion TCGA_RNA-Seq USP22-MYH10 USP22 chr17 20919065 - MYH10 chr17 8508300 - Exonic hg19 BRCA TCGA-A8-A076-01A 4 7 Out-of-frame Intra-chr p11.2 p13.1 Seq+ 20375 ChimerSeq STARFusion TCGA_RNA-Seq MRPL48-DTX4 MRPL48 chr11 73536841 + DTX4 chr11 58972149 + Exonic hg19 BRCA TCGA-A8-A076-01A 2 2 In-Frame Intra-chr q13.4 q12.1 Seq+ 20376 ChimerSeq STARFusion TCGA_RNA-Seq TMED3-KIAA1024 TMED3 chr15 79606347 + KIAA1024 chr15 79748440 + Exonic hg19 BRCA TCGA-A8-A076-01A 2 1 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 20377 ChimerSeq STARFusion TCGA_RNA-Seq DLEU2-RNASEH2B DLEU2 chr13 50699438 - RNASEH2B chr13 51501543 + Exonic hg19 BRCA TCGA-AR-A0U0-01A 3 3 3'UTR-CDS Intra-chr q14.2 Tumor suppressor gene q14.3 20378 ChimerSeq STARFusion TCGA_RNA-Seq NDRG1-B2M NDRG1 chr8 134270609 - B2M chr15 45009805 + Exonic hg19 BRCA TCGA-AR-A0U0-01A 2 1 CDS-3'UTR Inter-chr q24.22 Tumor suppressor gene Oncogene 20379 ChimerSeq STARFusion TCGA_RNA-Seq STK38-PCMTD1 STK38 chr6 36474360 - PCMTD1 chr8 52744127 - Exonic hg19 BRCA TCGA-AR-A0U0-01A 2 0 In-Frame Inter-chr p21.31 q11.23 20380 ChimerSeq STARFusion TCGA_RNA-Seq TEAD1-COPB1 TEAD1 chr11 12696381 + COPB1 chr11 14515985 - Exonic hg19 BRCA TCGA-A1-A0SI-01A 2 0 5'UTR-CDS Intra-chr p15.3 Transcription factor p15.2 20381 ChimerSeq STARFusion TCGA_RNA-Seq PHF20-DYNLRB1 PHF20 chr20 34360001 + DYNLRB1 chr20 33114073 + Exonic hg19 BRCA TCGA-E2-A1LE-01A 107 77 5'UTR-CDS Intra-chr q11.22 Transcription factor q11.22 Seq+ 20382 ChimerSeq STARFusion TCGA_RNA-Seq DCP2-SRP19 DCP2 chr5 112343739 + SRP19 chr5 112203101 + Exonic hg19 BRCA TCGA-E2-A1LE-01A 7 147 In-Frame Intra-chr q22.2 q22.2 Seq+ 20383 ChimerSeq STARFusion TCGA_RNA-Seq PHF20-DYNLRB1 PHF20 chr20 34360001 + DYNLRB1 chr20 33103234 + Exonic hg19 BRCA TCGA-E2-A1LE-01A 14 76 5'UTR-5'UTR Intra-chr q11.22 Transcription factor q11.22 Seq+ 20384 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPH1-RNF130 HNRNPH1 chr5 179042547 - RNF130 chr5 179382669 - Exonic hg19 BRCA TCGA-E2-A1LE-01A 9 83 3'UTR-CDS Intra-chr q35.3 q35.3 Seq+ 20385 ChimerSeq STARFusion TCGA_RNA-Seq PDE10A-PSMB1 PDE10A chr6 165956928 - PSMB1 chr6 170846428 - Exonic hg19 BRCA TCGA-E2-A1LE-01A 14 49 In-Frame Intra-chr q27 Seq+ 20386 ChimerSeq STARFusion TCGA_RNA-Seq ZNF750-B3GNTL1 ZNF750 chr17 80797803 - B3GNTL1 chr17 80923622 - Exonic hg19 BRCA TCGA-E2-A1LE-01A 13 53 5'UTR-CDS Intra-chr q25.3 Transcription factor Seq+ 20387 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPH1-RNF130 HNRNPH1 chr5 179042547 - RNF130 chr5 179383333 - Exonic hg19 BRCA TCGA-E2-A1LE-01A 3 81 3'UTR-CDS Intra-chr q35.3 q35.3 Seq+ 20388 ChimerSeq STARFusion TCGA_RNA-Seq UBAP2-PRIM2 UBAP2 chr9 34048823 - PRIM2 chr6 57244699 + Exonic hg19 BRCA TCGA-E2-A1LE-01A 13 26 5'UTR-CDS Inter-chr p13.3 p11.2 20389 ChimerSeq STARFusion TCGA_RNA-Seq NOMO1-MYH11 NOMO1 chr16 14983072 + MYH11 chr16 15917268 - Exonic hg19 BRCA TCGA-E2-A1LE-01A 10 25 In-Frame Intra-chr Oncogene Seq+ 20390 ChimerSeq STARFusion TCGA_RNA-Seq EZR-TAGAP EZR chr6 159192276 - TAGAP chr6 159465952 - Exonic hg19 BRCA TCGA-E2-A1LE-01A 7 12 CDS-5'UTR Intra-chr q25.3 q25.3 20391 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-CDK12 ERBB2 chr17 37866734 + CDK12 chr17 37712539 + Exonic hg19 BRCA TCGA-E2-A1LE-01A 5 19 CDS-3'UTR Intra-chr q12 Oncogene q12 Oncogene Seq+ 20392 ChimerSeq STARFusion TCGA_RNA-Seq PRMT7-NFATC3 PRMT7 chr16 68387469 + NFATC3 chr16 68260253 + Exonic hg19 BRCA TCGA-E2-A1LE-01A 2 28 In-Frame Intra-chr q22.1 q22.1 Transcription factor Seq+ 20393 ChimerSeq STARFusion TCGA_RNA-Seq ZNHIT1-PPP1R1B ZNHIT1 chr7 100861498 + PPP1R1B chr17 37791860 + Exonic hg19 BRCA TCGA-E2-A1LE-01A 6 12 In-Frame Inter-chr q22.1 q12 Tumor suppressor gene Seq+ 20394 ChimerSeq STARFusion TCGA_RNA-Seq CD276-PARP16 CD276 chr15 73976801 + PARP16 chr15 65563410 - Exonic hg19 BRCA TCGA-E2-A1LE-01A 4 9 5'UTR-CDS Intra-chr q24.1 q22.31 Seq+ 20395 ChimerSeq STARFusion TCGA_RNA-Seq PLCD4-VIL1 PLCD4 chr2 219487601 + VIL1 chr2 219313946 + Exonic hg19 BRCA TCGA-E2-A1LE-01A 4 5 Out-of-frame Intra-chr q35 q35 Tumor suppressor gene Seq+ 20396 ChimerSeq STARFusion TCGA_RNA-Seq NFKB2-GBF1 NFKB2 chr10 104156246 + GBF1 chr10 104128496 + Exonic hg19 BRCA TCGA-E2-A1LE-01A 2 10 Out-of-frame Intra-chr q24.32 Oncogene Transcription factor q24.32 Seq+ 20397 ChimerSeq STARFusion TCGA_RNA-Seq CD276-PARP16 CD276 chr15 73976801 + PARP16 chr15 65559106 - Exonic hg19 BRCA TCGA-E2-A1LE-01A 2 9 5'UTR-CDS Intra-chr q24.1 q22.31 Seq+ 20398 ChimerSeq STARFusion TCGA_RNA-Seq ITSN2-NMT1 ITSN2 chr2 24468998 - NMT1 chr17 43171053 + Exonic hg19 BRCA TCGA-E2-A1LE-01A 3 5 In-Frame Inter-chr p23.3 q21.31 Seq+ 20399 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-GRB7 STARD3 chr17 37793484 + GRB7 chr17 37898505 + Exonic hg19 BRCA TCGA-E2-A1LE-01A 3 5 5'UTR-5'UTR Intra-chr q12 q12 Seq+ 20400 ChimerSeq STARFusion TCGA_RNA-Seq AFF4-FSTL4 AFF4 chr5 132224771 - FSTL4 chr5 132561511 - Exonic hg19 BRCA TCGA-E2-A1LE-01A 2 7 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 20401 ChimerSeq STARFusion TCGA_RNA-Seq RNF185-ISX RNF185 chr22 31556289 + ISX chr22 35462745 + Exonic hg19 BRCA TCGA-AC-A3YI-01A 3 23 5'UTR-5'UTR Intra-chr q12.2 q12.3 Transcription factor Seq+ 20402 ChimerSeq STARFusion TCGA_RNA-Seq RNF185-ISX RNF185 chr22 31556289 + ISX chr22 35478511 + Exonic hg19 BRCA TCGA-AC-A3YI-01A 3 23 5'UTR-CDS Intra-chr q12.2 q12.3 Transcription factor Seq+ 20403 ChimerSeq STARFusion TCGA_RNA-Seq SF3A1-SFI1 SF3A1 chr22 30752719 - SFI1 chr22 31952928 + Exonic hg19 BRCA TCGA-AC-A3YI-01A 2 3 Out-of-frame Intra-chr q12.2 q12.2 20404 ChimerSeq STARFusion TCGA_RNA-Seq SCFD2-FIP1L1 SCFD2 chr4 54139993 - FIP1L1 chr4 54265897 + Exonic hg19 BRCA TCGA-AC-A3YI-01A 2 2 In-Frame Intra-chr q12 q12 Seq+ 20405 ChimerSeq STARFusion TCGA_RNA-Seq AHNAK-IGL@ AHNAK chr11 62300472 - IGL@ chr22 23247167 + Exonic hg19 BRCA TCGA-BH-A0DH-01A 3 5 Out-of-frame Inter-chr q12.3 Tumor suppressor gene q11.22 20406 ChimerSeq STARFusion TCGA_RNA-Seq LMX1B-RAD51B LMX1B chr9 129377848 + RAD51B chr14 69149654 + Exonic hg19 BRCA TCGA-E2-A14R-01A 32 133 CDS-3'UTR Inter-chr q33.3 Transcription factor q24.1 Seq+ 20407 ChimerSeq STARFusion TCGA_RNA-Seq LMX1B-RAD51B LMX1B chr9 129377848 + RAD51B chr14 69196525 + Exonic hg19 BRCA TCGA-E2-A14R-01A 20 132 CDS-3'UTR Inter-chr q33.3 Transcription factor q24.1 Seq+ 20408 ChimerSeq STARFusion TCGA_RNA-Seq RAD51B-LMX1B RAD51B chr14 69012341 + LMX1B chr9 129453115 + Exonic hg19 BRCA TCGA-E2-A14R-01A 17 25 3'UTR-CDS Inter-chr q24.1 q33.3 Transcription factor Seq+ 20409 ChimerSeq STARFusion TCGA_RNA-Seq MED29-SAMD4B MED29 chr19 39888288 + SAMD4B chr19 39873848 + Exonic hg19 BRCA TCGA-E2-A14R-01A 5 33 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 20410 ChimerSeq STARFusion TCGA_RNA-Seq RBFOX2-VN2R3P RBFOX2 chr22 36177647 - VN2R3P chr9 39017022 + Exonic hg19 BRCA TCGA-E2-A14R-01A 11 8 Out-of-frame Inter-chr p12 Seq+ 20411 ChimerSeq STARFusion TCGA_RNA-Seq MED29-SAMD4B MED29 chr19 39884277 + SAMD4B chr19 39873848 + Exonic hg19 BRCA TCGA-E2-A14R-01A 3 32 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 20412 ChimerSeq STARFusion TCGA_RNA-Seq NAP1L1-KRR1 NAP1L1 chr12 76467983 - KRR1 chr12 75902226 - Exonic hg19 BRCA TCGA-E2-A14R-01A 4 19 Out-of-frame Intra-chr q21.2 q21.2 20413 ChimerSeq STARFusion TCGA_RNA-Seq TOP1-PZP TOP1 chr20 39690130 + PZP chr12 9356547 - Exonic hg19 BRCA TCGA-E2-A14R-01A 4 18 In-Frame Inter-chr q12 Oncogene p13.31 Seq+ 20414 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD1-PXDNL PCMTD1 chr8 52744004 - PXDNL chr8 52505258 - Exonic hg19 BRCA TCGA-E2-A14R-01A 3 16 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 20415 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-TLCD2 YWHAE chr17 1303341 - TLCD2 chr17 1612875 - Exonic hg19 BRCA TCGA-E2-A14R-01A 4 6 In-Frame Intra-chr p13.3 Seq+ 20416 ChimerSeq STARFusion TCGA_RNA-Seq MBOAT2-ARHGAP25 MBOAT2 chr2 9013238 - ARHGAP25 chr2 69002353 + Exonic hg19 BRCA TCGA-E2-A14R-01A 2 13 In-Frame Intra-chr p25.1 p13.3 Seq+ 20417 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHM1-GAA PLEKHM1 chr17 43552466 - GAA chr17 78081356 + Exonic hg19 BRCA TCGA-E2-A14R-01A 3 7 In-Frame Intra-chr q25.3 Seq+ 20418 ChimerSeq STARFusion TCGA_RNA-Seq RBFOX2-MYH9 RBFOX2 chr22 36424288 - MYH9 chr22 36712714 - Exonic hg19 BRCA TCGA-E2-A14R-01A 3 6 In-Frame Intra-chr q12.3 Oncogene Tumor suppressor gene Seq+ 20419 ChimerSeq STARFusion TCGA_RNA-Seq RAD21-EIF3H RAD21 chr8 117866484 - EIF3H chr8 117671219 - Exonic hg19 BRCA TCGA-E2-A14R-01A 2 7 Out-of-frame Intra-chr q24.11 q24.11 Seq+ 20420 ChimerSeq STARFusion TCGA_RNA-Seq SYNRG-TUBD1 SYNRG chr17 35936439 - TUBD1 chr17 57944110 - Exonic hg19 BRCA TCGA-C8-A12M-01A 10 87 In-Frame Intra-chr q23.1 Seq+ 20421 ChimerSeq STARFusion TCGA_RNA-Seq SYNRG-TUBD1 SYNRG chr17 35936439 - TUBD1 chr17 57941208 - Exonic hg19 BRCA TCGA-C8-A12M-01A 2 87 In-Frame Intra-chr q23.1 Seq+ 20422 ChimerSeq STARFusion TCGA_RNA-Seq SYNRG-TUBD1 SYNRG chr17 35931890 - TUBD1 chr17 57944110 - Exonic hg19 BRCA TCGA-C8-A12M-01A 2 87 Out-of-frame Intra-chr q23.1 Seq+ 20423 ChimerSeq STARFusion TCGA_RNA-Seq CORO1C-C12orf42 CORO1C chr12 109072048 - C12orf42 chr12 103696337 - Exonic hg19 BRCA TCGA-C8-A12M-01A 4 45 Out-of-frame Intra-chr q24.11 q23.2 Seq+ 20424 ChimerSeq STARFusion TCGA_RNA-Seq CORO1C-C12orf42 CORO1C chr12 109072048 - C12orf42 chr12 103699942 - Exonic hg19 BRCA TCGA-C8-A12M-01A 3 45 Out-of-frame Intra-chr q24.11 q23.2 Seq+ 20425 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-TSPAN8 FRS2 chr12 69864310 + TSPAN8 chr12 71551567 - Exonic hg19 BRCA TCGA-C8-A12M-01A 3 38 5'UTR-5'UTR Intra-chr q15 q21.1 Seq+ 20426 ChimerSeq STARFusion TCGA_RNA-Seq HECTD4-SRRM4 HECTD4 chr12 112605121 - SRRM4 chr12 119554742 + Exonic hg19 BRCA TCGA-C8-A12M-01A 9 7 Out-of-frame Intra-chr q24.13 q24.23 Seq+ 20427 ChimerSeq STARFusion TCGA_RNA-Seq PPM1E-VMP1 PPM1E chr17 56833822 + VMP1 chr17 57886157 + Exonic hg19 BRCA TCGA-C8-A12M-01A 7 15 Out-of-frame Intra-chr q22 q23.1 Seq+ 20428 ChimerSeq STARFusion TCGA_RNA-Seq RPTOR-WASH1 RPTOR chr17 78867665 + WASH1 chr9 25004 - Exonic hg19 BRCA TCGA-C8-A12M-01A 7 7 CDS-5'UTR Inter-chr q25.3 20429 ChimerSeq STARFusion TCGA_RNA-Seq CDK12-AKAP1 CDK12 chr17 37628016 + AKAP1 chr17 55187386 + Exonic hg19 BRCA TCGA-C8-A12M-01A 4 16 Out-of-frame Intra-chr q12 Oncogene q22 Seq+ 20430 ChimerSeq STARFusion TCGA_RNA-Seq PPM1E-VMP1 PPM1E chr17 56833641 + VMP1 chr17 57886157 + Exonic hg19 BRCA TCGA-C8-A12M-01A 3 15 Out-of-frame Intra-chr q22 q23.1 Seq+ 20431 ChimerSeq STARFusion TCGA_RNA-Seq CACNG4-VMP1 CACNG4 chr17 64961247 + VMP1 chr17 57812699 + Exonic hg19 BRCA TCGA-C8-A12M-01A 2 16 In-Frame Intra-chr q24.2 q23.1 Seq+ 20432 ChimerSeq STARFusion TCGA_RNA-Seq CANT1-FBXL20 CANT1 chr17 77005746 - FBXL20 chr17 37459892 - Exonic hg19 BRCA TCGA-C8-A12M-01A 4 6 5'UTR-CDS Intra-chr q25.3 q12 Seq+ 20433 ChimerSeq STARFusion TCGA_RNA-Seq MED13L-RNFT2 MED13L chr12 116534474 - RNFT2 chr12 117204619 + Exonic hg19 BRCA TCGA-C8-A12M-01A 2 11 Out-of-frame Intra-chr q24.21 q24.22 Seq+ 20434 ChimerSeq STARFusion TCGA_RNA-Seq MRPL41-ZNF281 MRPL41 chr9 140446929 + ZNF281 chr1 200378618 - Exonic hg19 BRCA TCGA-C8-A12M-01A 3 0 Out-of-frame Inter-chr q34.3 q32.1 Transcription factor 20435 ChimerSeq STARFusion TCGA_RNA-Seq PFN1-AMPD2 PFN1 chr17 4851681 - AMPD2 chr1 110162497 + Exonic hg19 BRCA TCGA-C8-A12M-01A 3 0 Out-of-frame Inter-chr p13.2 Tumor suppressor gene p13.3 20436 ChimerSeq STARFusion TCGA_RNA-Seq RPTOR-WASH2P RPTOR chr17 78867665 + WASH2P chr2 114346127 + Exonic hg19 BRCA TCGA-C8-A12M-01A 3 0 CDS-5'UTR Inter-chr q25.3 q14.1 20437 ChimerSeq STARFusion TCGA_RNA-Seq JOSD1-DDX17 JOSD1 chr22 39095808 - DDX17 chr22 38897285 - Exonic hg19 BRCA TCGA-C8-A12M-01A 2 0 In-Frame Intra-chr q13.1 q13.1 20438 ChimerSeq STARFusion TCGA_RNA-Seq VCAN-SNX18 VCAN chr5 82789750 + SNX18 chr5 53839009 + Exonic hg19 BRCA TCGA-C8-A12M-01A 2 0 In-Frame Intra-chr q14.2 q11.2 20439 ChimerSeq STARFusion TCGA_RNA-Seq SYTL2-CHRM1 SYTL2 chr11 85411558 - CHRM1 chr11 62678650 - Exonic hg19 BRCA TCGA-BH-A201-01A 23 338 CDS-5'UTR Intra-chr q14.1 q12.3 Seq+ 20440 ChimerSeq STARFusion TCGA_RNA-Seq PCF11-KDM2A PCF11 chr11 82868673 + KDM2A chr11 66974981 + Exonic hg19 BRCA TCGA-BH-A201-01A 41 126 Out-of-frame Intra-chr q14.1 q13.2 Transcription factor Seq+ 20441 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-RNF169 FCHSD2 chr11 72613588 - RNF169 chr11 74500671 + Exonic hg19 BRCA TCGA-BH-A201-01A 12 44 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 20442 ChimerSeq STARFusion TCGA_RNA-Seq PAK1-MYO7A PAK1 chr11 77184597 - MYO7A chr11 76841635 + Exonic hg19 BRCA TCGA-BH-A201-01A 7 16 5'UTR-5'UTR Intra-chr q14.1 STE:STE20 q13.5 Seq+ 20443 ChimerSeq STARFusion TCGA_RNA-Seq PAK1-MYO7A PAK1 chr11 77184597 - MYO7A chr11 76853755 + Exonic hg19 BRCA TCGA-BH-A201-01A 5 16 5'UTR-CDS Intra-chr q14.1 STE:STE20 q13.5 Seq+ 20444 ChimerSeq STARFusion TCGA_RNA-Seq NEU3-SNTG1 NEU3 chr11 74716670 + SNTG1 chr8 51503439 + Exonic hg19 BRCA TCGA-BH-A201-01A 5 11 In-Frame Inter-chr q13.4 q11.21 Seq+ 20445 ChimerSeq STARFusion TCGA_RNA-Seq VRK1-PAPOLA VRK1 chr14 97263784 + PAPOLA chr14 96997812 + Exonic hg19 BRCA TCGA-BH-A1F5-01A 3 5 5'UTR-CDS Intra-chr q32.2 CK1:VRK q32.2 Seq+ 20446 ChimerSeq STARFusion TCGA_RNA-Seq STAG1-ISY1 STAG1 chr3 136471037 - ISY1 chr3 128859328 - Exonic hg19 BRCA TCGA-AR-A251-01A 110 344 5'UTR-CDS Intra-chr q22.3 q21.3 Seq+ 20447 ChimerSeq STARFusion TCGA_RNA-Seq STAG1-ISY1 STAG1 chr3 136471037 - ISY1 chr3 128859324 - Exonic hg19 BRCA TCGA-AR-A251-01A 51 343 5'UTR-CDS Intra-chr q22.3 q21.3 Seq+ 20448 ChimerSeq STARFusion TCGA_RNA-Seq LINC00665-SPTBN4 LINC00665 chr19 36821155 - SPTBN4 chr19 40993604 + Exonic hg19 BRCA TCGA-AR-A251-01A 26 55 Out-of-frame Intra-chr q13.12 q13.2 20449 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K4-FNDC1 MAP3K4 chr6 161471011 + FNDC1 chr6 159618463 + Exonic hg19 BRCA TCGA-AR-A251-01A 26 50 Out-of-frame Intra-chr q26 STE:STE11 Tumor suppressor gene q25.3 Seq+ 20450 ChimerSeq STARFusion TCGA_RNA-Seq LINC00665-SPTBN4 LINC00665 chr19 36821155 - SPTBN4 chr19 40995982 + Exonic hg19 BRCA TCGA-AR-A251-01A 8 55 Out-of-frame Intra-chr q13.12 q13.2 20451 ChimerSeq STARFusion TCGA_RNA-Seq FNBP1L-NCR2 FNBP1L chr1 93913862 + NCR2 chr6 41303569 + Exonic hg19 BRCA TCGA-AR-A251-01A 11 42 CDS-5'UTR Inter-chr p22.1 p21.1 Seq+ 20452 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSD1 PRSS27 chr16 2763530 - TPSD1 chr16 1308333 + Exonic hg19 BRCA TCGA-AR-A251-01A 14 20 In-Frame Intra-chr p13.3 p13.3 20453 ChimerSeq STARFusion TCGA_RNA-Seq PRPSAP1-ST6GALNAC2 PRPSAP1 chr17 74344610 - ST6GALNAC2 chr17 74574898 - Exonic hg19 BRCA TCGA-AR-A251-01A 11 31 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 20454 ChimerSeq STARFusion TCGA_RNA-Seq ELK3-AMDHD1 ELK3 chr12 96617551 + AMDHD1 chr12 96346495 + Exonic hg19 BRCA TCGA-AR-A251-01A 13 22 Out-of-frame Intra-chr q23.1 Transcription factor q23.1 Seq+ 20455 ChimerSeq STARFusion TCGA_RNA-Seq CGNL1-TCF12 CGNL1 chr15 57754090 + TCF12 chr15 57578355 + Exonic hg19 BRCA TCGA-AR-A251-01A 11 29 CDS-3'UTR Intra-chr q21.3 q21.3 Oncogene Transcription factor Seq+ 20456 ChimerSeq STARFusion TCGA_RNA-Seq ZNF251-FAHD2B ZNF251 chr8 145979068 - FAHD2B chr2 97757449 - Exonic hg19 BRCA TCGA-AR-A251-01A 10 33 CDS-5'UTR Inter-chr Transcription factor q11.2 Seq+ 20457 ChimerSeq STARFusion TCGA_RNA-Seq ZNF251-FAHD2B ZNF251 chr8 145979068 - FAHD2B chr2 97757725 - Exonic hg19 BRCA TCGA-AR-A251-01A 10 18 CDS-5'UTR Inter-chr Transcription factor q11.2 Seq+ 20458 ChimerSeq STARFusion TCGA_RNA-Seq NAV2-PACSIN3 NAV2 chr11 20104725 + PACSIN3 chr11 47204620 - Exonic hg19 BRCA TCGA-AR-A251-01A 7 20 CDS-5'UTR Intra-chr p15.1 p11.2 Seq+ 20459 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD39-FAM178B ANKRD39 chr2 97519138 - FAM178B chr2 97674921 - Exonic hg19 BRCA TCGA-AR-A251-01A 9 6 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 20460 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSD1 PRSS27 chr16 2763530 - TPSD1 chr16 1292077 + Exonic hg19 BRCA TCGA-AR-A251-01A 5 20 CDS-5'UTR Intra-chr p13.3 p13.3 20461 ChimerSeq STARFusion TCGA_RNA-Seq PRUNE2-GNAQ PRUNE2 chr9 79438548 - GNAQ chr9 80412564 - Exonic hg19 BRCA TCGA-AR-A251-01A 6 11 Out-of-frame Intra-chr q21.2 q21.2 Oncogene Seq+ 20462 ChimerSeq STARFusion TCGA_RNA-Seq QKI-PACRG QKI chr6 163899928 + PACRG chr6 163483182 + Exonic hg19 BRCA TCGA-AN-A0XU-01A 27 80 In-Frame Intra-chr q26 q26 Tumor suppressor gene Seq+ 20463 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A10-HGS SLC25A10 chr17 79683080 + HGS chr17 79667497 + Exonic hg19 BRCA TCGA-AN-A0XU-01A 21 24 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 20464 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A10-HGS SLC25A10 chr17 79683080 + HGS chr17 79667497 + Exonic hg19 BRCA TCGA-AN-A0XU-01A 21 24 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 20465 ChimerSeq STARFusion TCGA_RNA-Seq MRPS23-CUEDC1 MRPS23 chr17 55927328 - CUEDC1 chr17 55945604 - Exonic hg19 BRCA TCGA-AN-A0XU-01A 6 41 Out-of-frame Intra-chr q22 q22 Seq+ 20466 ChimerSeq STARFusion TCGA_RNA-Seq NAT10-CAPRIN1 NAT10 chr11 34130380 + CAPRIN1 chr11 34118026 + Exonic hg19 BRCA TCGA-AN-A0XU-01A 8 26 Out-of-frame Intra-chr p13 p13 Seq+ 20467 ChimerSeq STARFusion TCGA_RNA-Seq NAT10-CAPRIN1 NAT10 chr11 34127339 + CAPRIN1 chr11 34118026 + Exonic hg19 BRCA TCGA-AN-A0XU-01A 2 26 5'UTR-CDS Intra-chr p13 p13 Seq+ 20468 ChimerSeq STARFusion TCGA_RNA-Seq ABTB2-NDUFB1 ABTB2 chr11 34378248 - NDUFB1 chr14 92583986 - Exonic hg19 BRCA TCGA-AN-A0XU-01A 4 7 In-Frame Inter-chr p13 q32.12 Seq+ 20469 ChimerSeq STARFusion TCGA_RNA-Seq CACHD1-RNF2 CACHD1 chr1 65147789 + RNF2 chr1 185056684 + Exonic hg19 BRCA TCGA-AN-A0XU-01A 3 5 CDS-5'UTR Intra-chr p31.3 q25.3 Oncogene Seq+ 20470 ChimerSeq STARFusion TCGA_RNA-Seq RUNX1-DTD1 RUNX1 chr21 36252854 - DTD1 chr20 18724744 + Exonic hg19 BRCA TCGA-C8-A8HR-01A 10 37 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor p11.23 Seq+ 20471 ChimerSeq STARFusion TCGA_RNA-Seq SEP15-MTMR1 2019_ 9_ 15_ chr1 87379711 - MTMR1 chrX 149887097 + Exonic hg19 BRCA TCGA-A8-A095-01A 2 0 Out-of-frame Inter-chr q28 20472 ChimerSeq STARFusion TCGA_RNA-Seq RGS5-EPRS RGS5 chr1 163172582 - EPRS chr1 220174597 - Exonic hg19 BRCA TCGA-AO-A0J8-01A 2 0 In-Frame Intra-chr q23.3 q41 20473 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-P2RY8 ASMTL chrY 1503915 - P2RY8 chrY 1535475 - Exonic hg19 BRCA TCGA-EW-A1P5-01A 2 8 CDS-5'UTR Intra-chr p22.33 p22.33 Seq+ 20474 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-SNX31 VPS13B chr8 100182391 + SNX31 chr8 101648239 - Exonic hg19 BRCA TCGA-EW-A1P5-01A 2 3 Out-of-frame Intra-chr q22.2 q22.3 Seq+ 20475 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB43-PITPNC1 ZBTB43 chr9 129571194 + PITPNC1 chr17 65528918 + Exonic hg19 BRCA TCGA-BH-A1FM-01A 83 158 5'UTR-CDS Inter-chr q33.3 Transcription factor q24.2 Seq+ 20476 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-DYNLL2 KANSL1 chr17 44301037 - DYNLL2 chr17 56164443 + Exonic hg19 BRCA TCGA-BH-A1FM-01A 13 89 5'UTR-5'UTR Intra-chr q22 Seq+ 20477 ChimerSeq STARFusion TCGA_RNA-Seq CRHR1-DYNLL2 CRHR1 chr17 43699407 + DYNLL2 chr17 56164443 + Exonic hg19 BRCA TCGA-BH-A1FM-01A 11 63 5'UTR-5'UTR Intra-chr q21.31 q22 Seq+ 20478 ChimerSeq STARFusion TCGA_RNA-Seq CCNK-CCDC171 CCNK chr14 99969981 + CCDC171 chr9 15920268 + Exonic hg19 BRCA TCGA-BH-A1FM-01A 8 62 Out-of-frame Inter-chr q32.2 p22.3 Seq+ 20479 ChimerSeq STARFusion TCGA_RNA-Seq CCNK-CCDC171 CCNK chr14 99969981 + CCDC171 chr9 15888981 + Exonic hg19 BRCA TCGA-BH-A1FM-01A 6 61 Out-of-frame Inter-chr q32.2 p22.3 Seq+ 20480 ChimerSeq STARFusion TCGA_RNA-Seq KCNJ3-GALNT13 KCNJ3 chr2 155566331 + GALNT13 chr2 155252503 + Exonic hg19 BRCA TCGA-BH-A1FM-01A 7 15 In-Frame Intra-chr q24.1 q23.3 Seq+ 20481 ChimerSeq STARFusion TCGA_RNA-Seq SRSF1-SKA2 SRSF1 chr17 56084305 - SKA2 chr17 57189706 - Exonic hg19 BRCA TCGA-BH-A1FM-01A 7 11 In-Frame Intra-chr q22 q22 Seq+ 20482 ChimerSeq STARFusion TCGA_RNA-Seq TUBD1-HEATR6 TUBD1 chr17 57968192 - HEATR6 chr17 58128338 - Exonic hg19 BRCA TCGA-BH-A1FM-01A 4 17 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 20483 ChimerSeq STARFusion TCGA_RNA-Seq ASXL1-PDRG1 ASXL1 chr20 30956926 + PDRG1 chr20 30536685 - Exonic hg19 BRCA TCGA-BH-A1FM-01A 3 12 Out-of-frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 20484 ChimerSeq STARFusion TCGA_RNA-Seq KCNJ3-GALNT13 KCNJ3 chr2 155555989 + GALNT13 chr2 155252503 + Exonic hg19 BRCA TCGA-BH-A1FM-01A 2 15 Out-of-frame Intra-chr q24.1 q23.3 Seq+ 20485 ChimerSeq STARFusion TCGA_RNA-Seq MED13-ABCA9 MED13 chr17 60038949 - ABCA9 chr17 67025368 - Exonic hg19 BRCA TCGA-BH-A1FM-01A 3 10 Out-of-frame Intra-chr q23.2 q24.2 Seq+ 20486 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPC-TTC39B HNRNPC chr14 21678406 - TTC39B chr9 15192693 - Exonic hg19 BRCA TCGA-BH-A1FM-01A 3 8 3'UTR-CDS Inter-chr q11.2 p22.3 Seq+ 20487 ChimerSeq STARFusion TCGA_RNA-Seq MIR181A2HG-MAPKAP1 MIR181A2HG chr9 127421020 + MAPKAP1 chr9 128434922 - Exonic hg19 BRCA TCGA-BH-A1FM-01A 3 8 5'UTR-5'UTR Intra-chr q33.3 q33.3 Seq+ 20488 ChimerSeq STARFusion TCGA_RNA-Seq CAMK1D-CDC123 CAMK1D chr10 12391909 + CDC123 chr10 12272947 + Exonic hg19 BRCA TCGA-BH-A1FM-01A 2 8 In-Frame Intra-chr p13 p14 20489 ChimerSeq STARFusion TCGA_RNA-Seq C20orf196-CST4 C20orf196 chr20 5737494 + CST4 chr20 23666614 - Exonic hg19 BRCA TCGA-BH-A1FM-01A 2 7 5'UTR-CDS Intra-chr p12.3 p11.21 Seq+ 20490 ChimerSeq STARFusion TCGA_RNA-Seq ARFGEF2-CNIH2 ARFGEF2 chr20 47558524 + CNIH2 chr11 66049730 + Exonic hg19 BRCA TCGA-BH-A0H6-01A 15 50 In-Frame Inter-chr q13.13 q13.2 Seq+ 20491 ChimerSeq STARFusion TCGA_RNA-Seq RAB1B-ARFGEF2 RAB1B chr11 66043406 + ARFGEF2 chr20 47567860 + Exonic hg19 BRCA TCGA-BH-A0H6-01A 3 7 In-Frame Inter-chr q13.2 q13.13 Seq+ 20492 ChimerSeq STARFusion TCGA_RNA-Seq TET3-DGUOK TET3 chr2 74317174 + DGUOK chr2 74184252 + Exonic hg19 BRCA TCGA-BH-A0BZ-01A 22 66 In-Frame Intra-chr p13.1 Transcription factor p13.1 Seq+ 20493 ChimerSeq STARFusion TCGA_RNA-Seq MRPS23-VEZF1 MRPS23 chr17 55926601 - VEZF1 chr17 56052261 - Exonic hg19 BRCA TCGA-BH-A0BZ-01A 10 60 Out-of-frame Intra-chr q22 q22 Transcription factor Seq+ 20494 ChimerSeq STARFusion TCGA_RNA-Seq PRCC-HAPLN2 PRCC chr1 156738031 + HAPLN2 chr1 156593259 + Exonic hg19 BRCA TCGA-BH-A0BZ-01A 11 28 CDS-5'UTR Intra-chr q23.1 q23.1 Seq+ 20495 ChimerSeq STARFusion TCGA_RNA-Seq POLE-GOLGA3 POLE chr12 133248801 - GOLGA3 chr12 133360893 - Exonic hg19 BRCA TCGA-BH-A0BZ-01A 7 10 In-Frame Intra-chr q24.33 q24.33 Seq+ 20496 ChimerSeq STARFusion TCGA_RNA-Seq ASH1L-YY1AP1 ASH1L chr1 155531944 - YY1AP1 chr1 155638508 - Exonic hg19 BRCA TCGA-BH-A0BZ-01A 3 23 5'UTR-CDS Intra-chr q22 Transcription factor q22 Seq+ 20497 ChimerSeq STARFusion TCGA_RNA-Seq ASH1L-YY1AP1 ASH1L chr1 155531944 - YY1AP1 chr1 155638568 - Exonic hg19 BRCA TCGA-BH-A0BZ-01A 3 23 5'UTR-CDS Intra-chr q22 Transcription factor q22 Seq+ 20498 ChimerSeq STARFusion TCGA_RNA-Seq FLAD1-UBAP2L FLAD1 chr1 154955873 + UBAP2L chr1 154199758 + Exonic hg19 BRCA TCGA-BH-A0BZ-01A 6 5 5'UTR-CDS Intra-chr q21.3 q21.3 Seq+ 20499 ChimerSeq STARFusion TCGA_RNA-Seq SYNRG-CCR7 SYNRG chr17 35921297 - CCR7 chr17 38715194 - Exonic hg19 BRCA TCGA-BH-A0BZ-01A 2 14 In-Frame Intra-chr q21.2 Seq+ 20500 ChimerSeq STARFusion TCGA_RNA-Seq FBXO38-SPINK6 FBXO38 chr5 147796767 + SPINK6 chr5 147582584 + Exonic hg19 BRCA TCGA-BH-A0BZ-01A 3 7 CDS-5'UTR Intra-chr q32 q32 Seq+ 20501 ChimerSeq STARFusion TCGA_RNA-Seq RFTN1-DAZL RFTN1 chr3 16450882 - DAZL chr3 16636090 - Exonic hg19 BRCA TCGA-BH-A0BZ-01A 2 3 In-Frame Intra-chr p24.3 p24.3 Seq+ 20502 ChimerSeq STARFusion TCGA_RNA-Seq ZGPAT-RTEL1 ZGPAT chr20 62340516 + RTEL1 chr20 62290586 + Exonic hg19 BRCA TCGA-BH-A0BZ-01A 2 1 CDS-5'UTR Intra-chr q13.33 Transcription factor q13.33 20503 ChimerSeq STARFusion TCGA_RNA-Seq SREBF2-FMNL2 SREBF2 chr22 42290941 + FMNL2 chr2 153463853 + Exonic hg19 BRCA TCGA-C8-A26Y-01A 11 54 Out-of-frame Inter-chr q13.2 Transcription factor q23.3 Seq+ 20504 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD17-WDFY3 ANKRD17 chr4 73962834 - WDFY3 chr4 85630500 - Exonic hg19 BRCA TCGA-C8-A26Y-01A 10 14 In-Frame Intra-chr q13.3 q21.23 Seq+ 20505 ChimerSeq STARFusion TCGA_RNA-Seq KCNH7-SLC38A11 KCNH7 chr2 163693047 - SLC38A11 chr2 165796066 - Exonic hg19 BRCA TCGA-C8-A26Y-01A 6 28 In-Frame Intra-chr q24.2 q24.3 Seq+ 20506 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-PTK2 AGO2 chr8 141645584 - PTK2 chr8 141678523 - Exonic hg19 BRCA TCGA-C8-A26Y-01A 8 14 Out-of-frame Intra-chr q24.3 q24.3 20507 ChimerSeq STARFusion TCGA_RNA-Seq USP31-LOC100132247 USP31 chr16 23159959 - LOC100132247 chr16 22535141 + Exonic hg19 BRCA TCGA-C8-A26Y-01A 7 16 In-Frame Intra-chr p12.2 20508 ChimerSeq STARFusion TCGA_RNA-Seq USP31-LOC613037 USP31 chr16 23159959 - LOC613037 chr16 30246900 - Exonic hg19 BRCA TCGA-C8-A26Y-01A 10 2 CDS-3'UTR Intra-chr p12.2 20509 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA2-TACC1 PLEKHA2 chr8 38775588 + TACC1 chr8 38677040 + Exonic hg19 BRCA TCGA-C8-A26Y-01A 4 5 Out-of-frame Intra-chr p11.22 p11.22 20510 ChimerSeq STARFusion TCGA_RNA-Seq DAB2IP-WDR38 DAB2IP chr9 124526158 + WDR38 chr9 127616484 + Exonic hg19 BRCA TCGA-C8-A26Y-01A 4 4 Out-of-frame Intra-chr q33.2 Tumor suppressor gene q33.3 Seq+ 20511 ChimerSeq STARFusion TCGA_RNA-Seq ZNF567-TPM3P9 ZNF567 chr19 37180399 + TPM3P9 chr19 53945049 + Exonic hg19 BRCA TCGA-C8-A26Y-01A 2 5 Out-of-frame Intra-chr q13.12 Transcription factor q13.42 Seq+ 20512 ChimerSeq STARFusion TCGA_RNA-Seq CTNNA3-C14orf166B CTNNA3 chr10 69281600 - C14orf166B chr14 77302550 + Exonic hg19 BRCA TCGA-C8-A26Y-01A 2 2 In-Frame Inter-chr q21.3 Tumor suppressor gene Seq+ 20513 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-YTHDF2 ETV6 chr12 11992238 + YTHDF2 chr1 29095441 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 359 458 Out-of-frame Inter-chr p13.2 Tumor suppressor gene Transcription factor p35.3 Seq+ 20514 ChimerSeq STARFusion TCGA_RNA-Seq STAT3-PTRF STAT3 chr17 40540297 - PTRF chr17 40557406 - Exonic hg19 BRCA TCGA-EW-A1PB-01A 35 97 5'UTR-CDS Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor 20515 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-RHOD KDM2A chr11 66888829 + RHOD chr11 66833367 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 21 40 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 20516 ChimerSeq STARFusion TCGA_RNA-Seq PSPH-PHKG1 PSPH chr7 56118831 - PHKG1 chr7 56156668 - Exonic hg19 BRCA TCGA-EW-A1PB-01A 12 51 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 20517 ChimerSeq STARFusion TCGA_RNA-Seq ZNF385B-SCG5 ZNF385B chr2 180634230 - SCG5 chr15 32971967 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 8 62 In-Frame Inter-chr q31.3 Transcription factor Seq+ 20518 ChimerSeq STARFusion TCGA_RNA-Seq PGS1-BIRC5 PGS1 chr17 76395618 + BIRC5 chr17 76219546 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 13 40 In-Frame Intra-chr q25.3 q25.3 Oncogene Seq+ 20519 ChimerSeq STARFusion TCGA_RNA-Seq SLC30A6-SPAST SLC30A6 chr2 32418022 + SPAST chr2 32379891 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 18 13 CDS-3'UTR Intra-chr p22.3 p22.3 20520 ChimerSeq STARFusion TCGA_RNA-Seq ZNF385B-SCG5 ZNF385B chr2 180634230 - SCG5 chr15 32935787 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 4 62 CDS-5'UTR Inter-chr q31.3 Transcription factor Seq+ 20521 ChimerSeq STARFusion TCGA_RNA-Seq GABRP-KCNIP1 GABRP chr5 170224552 + KCNIP1 chr5 170145762 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 4 18 In-Frame Intra-chr q35.1 q35.1 Seq+ 20522 ChimerSeq STARFusion TCGA_RNA-Seq GUK1-TPPP GUK1 chr1 228333325 + TPPP chr5 678179 - Exonic hg19 BRCA TCGA-EW-A1PB-01A 5 11 CDS-5'UTR Inter-chr q42.13 p15.33 Seq+ 20523 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2A-MAU2 GATAD2A chr19 19496947 + MAU2 chr19 19465164 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 3 7 5'UTR-CDS Intra-chr p13.11 Transcription factor p13.11 20524 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-UGT1A1 ASMTL chrX 1571641 - UGT1A1 chr2 234675680 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 3 6 5'UTR-CDS Inter-chr p22.33 q37.1 Oncogene Seq+ 20525 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-UGT1A10 ASMTL chrX 1571641 - UGT1A10 chr2 234675680 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 3 6 5'UTR-CDS Inter-chr p22.33 q37.1 Seq+ 20526 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-UGT1A3 ASMTL chrX 1571641 - UGT1A3 chr2 234675680 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 3 6 5'UTR-CDS Inter-chr p22.33 q37.1 Seq+ 20527 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-UGT1A4 ASMTL chrX 1571641 - UGT1A4 chr2 234675680 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 3 6 5'UTR-CDS Inter-chr p22.33 q37.1 Seq+ 20528 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-UGT1A5 ASMTL chrX 1571641 - UGT1A5 chr2 234675680 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 3 6 5'UTR-CDS Inter-chr p22.33 q37.1 Seq+ 20529 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-UGT1A6 ASMTL chrX 1571641 - UGT1A6 chr2 234675680 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 3 6 5'UTR-CDS Inter-chr p22.33 q37.1 Seq+ 20530 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-UGT1A7 ASMTL chrX 1571641 - UGT1A7 chr2 234675680 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 3 6 5'UTR-CDS Inter-chr p22.33 q37.1 Seq+ 20531 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-UGT1A8 ASMTL chrX 1571641 - UGT1A8 chr2 234675680 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 3 6 5'UTR-CDS Inter-chr p22.33 q37.1 Seq+ 20532 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-UGT1A9 ASMTL chrX 1571641 - UGT1A9 chr2 234675680 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 3 6 5'UTR-CDS Inter-chr p22.33 q37.1 Seq+ 20533 ChimerSeq STARFusion TCGA_RNA-Seq CCDC142-TTC31 CCDC142 chr2 74702043 - TTC31 chr2 74717152 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 2 4 Out-of-frame Intra-chr p13.1 p13.1 20534 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-UGT1A1 ASMTL chrY 1521641 - UGT1A1 chr2 234675680 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 2 3 Out-of-frame Inter-chr p22.33 q37.1 Oncogene Seq+ 20535 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-UGT1A10 ASMTL chrY 1521641 - UGT1A10 chr2 234675680 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 2 3 Out-of-frame Inter-chr p22.33 q37.1 Seq+ 20536 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-UGT1A3 ASMTL chrY 1521641 - UGT1A3 chr2 234675680 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 2 3 Out-of-frame Inter-chr p22.33 q37.1 Seq+ 20537 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-UGT1A4 ASMTL chrY 1521641 - UGT1A4 chr2 234675680 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 2 3 Out-of-frame Inter-chr p22.33 q37.1 Seq+ 20538 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-UGT1A5 ASMTL chrY 1521641 - UGT1A5 chr2 234675680 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 2 3 Out-of-frame Inter-chr p22.33 q37.1 Seq+ 20539 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-UGT1A6 ASMTL chrY 1521641 - UGT1A6 chr2 234675680 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 2 3 Out-of-frame Inter-chr p22.33 q37.1 Seq+ 20540 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-UGT1A7 ASMTL chrY 1521641 - UGT1A7 chr2 234675680 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 2 3 Out-of-frame Inter-chr p22.33 q37.1 Seq+ 20541 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-UGT1A8 ASMTL chrY 1521641 - UGT1A8 chr2 234675680 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 2 3 Out-of-frame Inter-chr p22.33 q37.1 Seq+ 20542 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-UGT1A9 ASMTL chrY 1521641 - UGT1A9 chr2 234675680 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 2 3 Out-of-frame Inter-chr p22.33 q37.1 Seq+ 20543 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57842332 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 2 2 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 20544 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-MAZ RNA45S5 chrUn_gl000220 118133 + MAZ chr16 29817898 + Exonic hg19 BRCA TCGA-D8-A1J8-01A 3 1 Out-of-frame Inter-chr p11.2 Transcription factor 20545 ChimerSeq STARFusion TCGA_RNA-Seq ADIPOR1-DAD1 ADIPOR1 chr1 202915567 - DAD1 chr14 23044133 - Exonic hg19 BRCA TCGA-D8-A1J8-01A 2 0 In-Frame Inter-chr q32.1 q11.2 20546 ChimerSeq STARFusion TCGA_RNA-Seq KDM4C-TCEA1 KDM4C chr9 6720997 + TCEA1 chr8 54923052 - Exonic hg19 BRCA TCGA-D8-A1J8-01A 2 0 Out-of-frame Inter-chr p24.1 q11.23 20547 ChimerSeq STARFusion TCGA_RNA-Seq SRCIN1-PCYT2 SRCIN1 chr17 36731123 - PCYT2 chr17 79867478 - Exonic hg19 BRCA TCGA-A2-A0T1-01A 27 90 CDS-5'UTR Intra-chr q12 q25.3 Seq+ 20548 ChimerSeq STARFusion TCGA_RNA-Seq ACOT7-NSMCE2 ACOT7 chr1 6453317 - NSMCE2 chr8 126379010 + Exonic hg19 BRCA TCGA-A2-A0T1-01A 22 78 In-Frame Inter-chr p36.31 q24.13 Seq+ 20549 ChimerSeq STARFusion TCGA_RNA-Seq SAMD12-FDCSP SAMD12 chr8 119592954 - FDCSP chr4 71096912 + Exonic hg19 BRCA TCGA-A2-A0T1-01A 16 57 CDS-5'UTR Inter-chr q24.12 q13.3 Seq+ 20550 ChimerSeq STARFusion TCGA_RNA-Seq SRCIN1-PCYT2 SRCIN1 chr17 36734743 - PCYT2 chr17 79867478 - Exonic hg19 BRCA TCGA-A2-A0T1-01A 7 88 Out-of-frame Intra-chr q12 q25.3 Seq+ 20551 ChimerSeq STARFusion TCGA_RNA-Seq PCYT2-ANAPC11 PCYT2 chr17 79864340 - ANAPC11 chr17 79857796 + Exonic hg19 BRCA TCGA-A2-A0T1-01A 14 54 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 20552 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-TMPRSS13 IGL@ chr22 23011274 + TMPRSS13 chr11 117774259 - Exonic hg19 BRCA TCGA-A2-A0T1-01A 21 0 Out-of-frame Inter-chr q11.22 q23.3 20553 ChimerSeq STARFusion TCGA_RNA-Seq DENND1A-LRRC69 DENND1A chr9 126519982 - LRRC69 chr8 92231118 + Exonic hg19 BRCA TCGA-A2-A0T1-01A 7 42 Out-of-frame Inter-chr q33.3 q21.3 Seq+ 20554 ChimerSeq STARFusion TCGA_RNA-Seq PCYT2-ANAPC11 PCYT2 chr17 79865430 - ANAPC11 chr17 79857796 + Exonic hg19 BRCA TCGA-A2-A0T1-01A 2 54 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 20555 ChimerSeq STARFusion TCGA_RNA-Seq DENND1A-LRRC69 DENND1A chr9 126519982 - LRRC69 chr8 92201750 + Exonic hg19 BRCA TCGA-A2-A0T1-01A 3 42 Out-of-frame Inter-chr q33.3 q21.3 Seq+ 20556 ChimerSeq STARFusion TCGA_RNA-Seq DENND1A-LRRC69 DENND1A chr9 126519982 - LRRC69 chr8 92136721 + Exonic hg19 BRCA TCGA-A2-A0T1-01A 2 42 Out-of-frame Inter-chr q33.3 q21.3 Seq+ 20557 ChimerSeq STARFusion TCGA_RNA-Seq ELMO1-IGH@ ELMO1 chr7 37025574 - IGH@ chr14 107170239 - Exonic hg19 BRCA TCGA-A2-A0T1-01A 12 1 Out-of-frame Inter-chr p14.1 32.33 20558 ChimerSeq STARFusion TCGA_RNA-Seq DENND1A-SLC26A7 DENND1A chr9 126519982 - SLC26A7 chr8 92231118 + Exonic hg19 BRCA TCGA-A2-A0T1-01A 7 16 CDS-5'UTR Inter-chr q33.3 q21.3 Seq+ 20559 ChimerSeq STARFusion TCGA_RNA-Seq POLR2D-TFCP2L1 POLR2D chr2 128604637 - TFCP2L1 chr2 121977061 - Exonic hg19 BRCA TCGA-A2-A0T1-01A 7 16 Out-of-frame Intra-chr q14.3 q14.2 Transcription factor Seq+ 20560 ChimerSeq STARFusion TCGA_RNA-Seq ABCA6-LIG3 ABCA6 chr17 67102264 - LIG3 chr17 33323083 + Exonic hg19 BRCA TCGA-A2-A0T1-01A 4 26 Out-of-frame Intra-chr q24.3 q12 Tumor suppressor gene Seq+ 20561 ChimerSeq STARFusion TCGA_RNA-Seq A2M-IGH@ A2M chr12 9268644 - IGH@ chr14 106330057 - Exonic hg19 BRCA TCGA-A2-A0T1-01A 8 3 Out-of-frame Inter-chr p13.31 32.33 20562 ChimerSeq STARFusion TCGA_RNA-Seq DAB2IP-HTN3 DAB2IP chr9 124441060 + HTN3 chr4 70894160 + Exonic hg19 BRCA TCGA-A2-A0T1-01A 4 19 CDS-5'UTR Inter-chr q33.2 Tumor suppressor gene Seq+ 20563 ChimerSeq STARFusion TCGA_RNA-Seq DAB2IP-HTN3 DAB2IP chr9 124441060 + HTN3 chr4 70896445 + Exonic hg19 BRCA TCGA-A2-A0T1-01A 4 18 CDS-5'UTR Inter-chr q33.2 Tumor suppressor gene Seq+ 20564 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G3-USP48 EIF4G3 chr1 21377359 - USP48 chr1 22021714 - Exonic hg19 BRCA TCGA-A2-A0T1-01A 6 9 5'UTR-CDS Intra-chr p36.12 p36.12 20565 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-N4BP1 IGH@ chr14 106967049 - N4BP1 chr16 48573451 - Exonic hg19 BRCA TCGA-A2-A0T1-01A 7 2 Out-of-frame Inter-chr 32.33 q12.1 20566 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP1-IMPDH1P10 CTDSP1 chr2 219268140 + IMPDH1P10 chr2 202003716 - Exonic hg19 BRCA TCGA-A2-A0T1-01A 6 5 Out-of-frame Intra-chr q35 q33.1 20567 ChimerSeq STARFusion TCGA_RNA-Seq COX18-TBCD COX18 chr4 73927530 - TBCD chr17 80861281 + Exonic hg19 BRCA TCGA-A2-A0T1-01A 4 10 Out-of-frame Inter-chr q13.3 Seq+ 20568 ChimerSeq STARFusion TCGA_RNA-Seq WDR70-PGAP3 WDR70 chr5 37480089 + PGAP3 chr17 37841002 - Exonic hg19 BRCA TCGA-A2-A0T1-01A 2 18 In-Frame Inter-chr p13.2 q12 Oncogene Seq+ 20569 ChimerSeq STARFusion TCGA_RNA-Seq WDR70-PGAP3 WDR70 chr5 37480089 + PGAP3 chr17 37830932 - Exonic hg19 BRCA TCGA-A2-A0T1-01A 2 18 In-Frame Inter-chr p13.2 q12 Oncogene Seq+ 20570 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-GOSR1 TANC2 chr17 61315438 + GOSR1 chr17 28846957 + Exonic hg19 BRCA TCGA-A2-A0T1-01A 3 9 Out-of-frame Intra-chr q23.2 q11.2 Seq+ 20571 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-ANKRD17 NIPBL chr5 37010327 + ANKRD17 chr4 74043250 - Exonic hg19 BRCA TCGA-A2-A0T1-01A 2 12 In-Frame Inter-chr p13.2 q13.3 Seq+ 20572 ChimerSeq STARFusion TCGA_RNA-Seq METRNL-PPP1R1B METRNL chr17 81043199 + PPP1R1B chr17 37785423 + Exonic hg19 BRCA TCGA-A2-A0T1-01A 2 10 Out-of-frame Intra-chr q12 Tumor suppressor gene Seq+ 20573 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-RHOA MAP4 chr3 48130263 - RHOA chr3 49413024 - Exonic hg19 BRCA TCGA-A8-A09D-01A 29 232 5'UTR-5'UTR Intra-chr p21.31 p21.31 Oncogene Tumor suppressor gene Seq+ 20574 ChimerSeq STARFusion TCGA_RNA-Seq ATG13-TSPAN18 ATG13 chr11 46639440 + TSPAN18 chr11 44881879 + Exonic hg19 BRCA TCGA-A8-A09D-01A 13 109 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 20575 ChimerSeq STARFusion TCGA_RNA-Seq ATG13-TSPAN18 ATG13 chr11 46639925 + TSPAN18 chr11 44881879 + Exonic hg19 BRCA TCGA-A8-A09D-01A 3 109 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 20576 ChimerSeq STARFusion TCGA_RNA-Seq PHF21A-CAMK1D PHF21A chr11 46098305 - CAMK1D chr10 12811672 + Exonic hg19 BRCA TCGA-A8-A09D-01A 16 29 In-Frame Inter-chr p11.2 Transcription factor p13 Seq+ 20577 ChimerSeq STARFusion TCGA_RNA-Seq TIAM1-LOC100507412 TIAM1 chr21 32931240 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-A8-A09D-01A 14 6 5'UTR-5'UTR Inter-chr q22.11 20578 ChimerSeq STARFusion TCGA_RNA-Seq SUMF1-CNTN4 SUMF1 chr3 4458812 - CNTN4 chr3 3030029 + Exonic hg19 BRCA TCGA-A8-A09D-01A 8 23 Out-of-frame Intra-chr p26.1 p26.3 Seq+ 20579 ChimerSeq STARFusion TCGA_RNA-Seq CAMK1D-TSPAN18 CAMK1D chr10 12856306 + TSPAN18 chr11 44785976 + Exonic hg19 BRCA TCGA-A8-A09D-01A 5 21 CDS-5'UTR Inter-chr p13 p11.2 Seq+ 20580 ChimerSeq STARFusion TCGA_RNA-Seq ARFGEF2-NCOA3 ARFGEF2 chr20 47580435 + NCOA3 chr20 46211927 + Exonic hg19 BRCA TCGA-A8-A09D-01A 5 11 CDS-5'UTR Intra-chr q13.13 q13.12 Transcription factor Seq+ 20581 ChimerSeq STARFusion TCGA_RNA-Seq CLPB-ARMC4 CLPB chr11 72012847 - ARMC4 chr10 28229734 - Exonic hg19 BRCA TCGA-A8-A09D-01A 3 19 In-Frame Inter-chr q13.4 p12.1 Seq+ 20582 ChimerSeq STARFusion TCGA_RNA-Seq ARFGEF2-TSHZ2 ARFGEF2 chr20 47580435 + TSHZ2 chr20 51870038 + Exonic hg19 BRCA TCGA-A8-A09D-01A 4 9 In-Frame Intra-chr q13.13 q13.2 Transcription factor Seq+ 20583 ChimerSeq STARFusion TCGA_RNA-Seq ARFGEF2-NCOA3 ARFGEF2 chr20 47582560 + NCOA3 chr20 46211927 + Exonic hg19 BRCA TCGA-A8-A09D-01A 3 11 CDS-5'UTR Intra-chr q13.13 q13.12 Transcription factor Seq+ 20584 ChimerSeq STARFusion TCGA_RNA-Seq AMBRA1-HARBI1 AMBRA1 chr11 46615378 - HARBI1 chr11 46625459 - Exonic hg19 BRCA TCGA-A8-A09D-01A 2 13 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 20585 ChimerSeq STARFusion TCGA_RNA-Seq PEX16-AMBRA1 PEX16 chr11 45939009 - AMBRA1 chr11 46570050 - Exonic hg19 BRCA TCGA-A8-A09D-01A 2 5 CDS-5'UTR Intra-chr p11.2 p11.2 Seq+ 20586 ChimerSeq STARFusion TCGA_RNA-Seq STAT3-ZFPM2 STAT3 chr17 40540297 - ZFPM2 chr8 106646474 + Exonic hg19 BRCA TCGA-A8-A09D-01A 2 3 5'UTR-CDS Inter-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q22.3 Transcription factor Seq+ 20587 ChimerSeq STARFusion TCGA_RNA-Seq PREX1-PFDN4 PREX1 chr20 47444179 - PFDN4 chr20 52830890 + Exonic hg19 BRCA TCGA-A8-A09D-01A 2 2 In-Frame Intra-chr q13.13 q13.2 20588 ChimerSeq STARFusion TCGA_RNA-Seq LOC100616530-UBR5 LOC100616530 chr8 96281118 + UBR5 chr8 103341627 - Exonic hg19 BRCA TCGA-A8-A09D-01A 2 1 5'UTR-CDS Intra-chr q22.3 Oncogene 20589 ChimerSeq STARFusion TCGA_RNA-Seq SNPH-C20orf202 SNPH chr20 1277896 + C20orf202 chr20 1187513 + Exonic hg19 BRCA TCGA-A8-A09D-01A 2 1 Out-of-frame Intra-chr p13 p13 20590 ChimerSeq STARFusion TCGA_RNA-Seq PEG10-COL1A2 PEG10 chr7 94285892 + COL1A2 chr7 94029508 + Exonic hg19 BRCA TCGA-A8-A09R-01A 11 38 5'UTR-CDS Intra-chr q21.3 q21.3 Seq+ 20591 ChimerSeq STARFusion TCGA_RNA-Seq PEG10-COL1A2 PEG10 chr7 94285903 + COL1A2 chr7 94029508 + Exonic hg19 BRCA TCGA-A8-A09R-01A 3 36 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 20592 ChimerSeq STARFusion TCGA_RNA-Seq DLGAP5-L2HGDH DLGAP5 chr14 55658181 - L2HGDH chr14 50713971 - Exonic hg19 BRCA TCGA-A8-A09R-01A 5 6 5'UTR-CDS Intra-chr q22.3 q21.3 Seq+ 20593 ChimerSeq STARFusion TCGA_RNA-Seq ZNF473-NUP62 ZNF473 chr19 50534348 + NUP62 chr19 50413141 - Exonic hg19 BRCA TCGA-BH-A42V-01A 2 1 CDS-5'UTR Intra-chr q13.33 Transcription factor q13.33 Seq+ 20594 ChimerSeq STARFusion TCGA_RNA-Seq DENND5A-SBF2 DENND5A chr11 9215041 - SBF2 chr11 9879943 - Exonic hg19 BRCA TCGA-D8-A1XT-01A 19 62 In-Frame Intra-chr p15.4 p15.4 Seq+ 20595 ChimerSeq STARFusion TCGA_RNA-Seq BUB1B-EIF2AK4 BUB1B chr15 40453456 + EIF2AK4 chr15 40314720 + Exonic hg19 BRCA TCGA-D8-A1XT-01A 14 38 Out-of-frame Intra-chr q15.1 Oncogene q15.1 Seq+ 20596 ChimerSeq STARFusion TCGA_RNA-Seq SLC2A1-GRHL3 SLC2A1 chr1 43424305 - GRHL3 chr1 24657916 + Exonic hg19 BRCA TCGA-D8-A1XT-01A 6 13 Out-of-frame Intra-chr p34.2 p36.11 Transcription factor Seq+ 20597 ChimerSeq STARFusion TCGA_RNA-Seq TRIP12-SP110 TRIP12 chr2 230701564 - SP110 chr2 231037675 - Exonic hg19 BRCA TCGA-D8-A1XT-01A 3 25 Out-of-frame Intra-chr q36.3 q37.1 Transcription factor Seq+ 20598 ChimerSeq STARFusion TCGA_RNA-Seq NSD1-LOC100507412 NSD1 chr5 176639196 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-D8-A1XT-01A 4 17 CDS-5'UTR Inter-chr q35.3 Oncogene 20599 ChimerSeq STARFusion TCGA_RNA-Seq GAREM-ZFP36L2 GAREM chr18 29847450 - ZFP36L2 chr2 43451029 - Exonic hg19 BRCA TCGA-D8-A1XT-01A 7 0 Out-of-frame Inter-chr p21 Tumor suppressor gene 20600 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2B-TNNI3K GATAD2B chr1 153895209 - TNNI3K chr1 74954873 + Exonic hg19 BRCA TCGA-BH-A18Q-01A 20 43 5'UTR-CDS Intra-chr Transcription factor p31.1 20601 ChimerSeq STARFusion TCGA_RNA-Seq BCL2L11-AFMID BCL2L11 chr2 111881716 + AFMID chr17 76187051 + Exonic hg19 BRCA TCGA-BH-A18Q-01A 4 38 Out-of-frame Inter-chr q13 Tumor suppressor gene q25.3 Seq+ 20602 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0319L-PAGE2B KIAA0319L chr1 36019951 - PAGE2B chrX 55102467 + Exonic hg19 BRCA TCGA-BH-A18Q-01A 3 4 CDS-5'UTR Inter-chr p34.3 p11.21 Seq+ 20603 ChimerSeq STARFusion TCGA_RNA-Seq MAN1A2-TTF2 MAN1A2 chr1 117984947 + TTF2 chr1 117616283 + Exonic hg19 BRCA TCGA-BH-A18Q-01A 3 2 In-Frame Intra-chr p12 p13.1 Seq+ 20604 ChimerSeq STARFusion TCGA_RNA-Seq TAF15-AP2B1 TAF15 chr17 34151202 + AP2B1 chr17 33966614 + Exonic hg19 BRCA TCGA-AN-A049-01A 25 97 In-Frame Intra-chr q12 q12 Seq+ 20605 ChimerSeq STARFusion TCGA_RNA-Seq USP8-GOLGA8CP USP8 chr15 50788281 + GOLGA8CP chr15 20771427 + Exonic hg19 BRCA TCGA-AN-A049-01A 10 29 Out-of-frame Intra-chr q21.2 q11.2 Seq+ 20606 ChimerSeq STARFusion TCGA_RNA-Seq PRPF40B-SPATS2 PRPF40B chr12 50017376 + SPATS2 chr12 49854553 + Exonic hg19 BRCA TCGA-AN-A049-01A 9 3 5'UTR-5'UTR Intra-chr q13.12 q13.12 Seq+ 20607 ChimerSeq STARFusion TCGA_RNA-Seq MECR-NAALADL2 MECR chr1 29557243 - NAALADL2 chr3 175473008 + Exonic hg19 BRCA TCGA-AN-A049-01A 2 12 Out-of-frame Inter-chr p35.3 q26.31 Seq+ 20608 ChimerSeq STARFusion TCGA_RNA-Seq NOC2L-LOC401010 NOC2L chr1 881013 - LOC401010 chr2 132200567 - Exonic hg19 BRCA TCGA-A2-A0T0-01A 3 4 Out-of-frame Inter-chr p36.33 20609 ChimerSeq STARFusion TCGA_RNA-Seq G3BP1-NPM1 G3BP1 chr5 151151597 + NPM1 chr5 170832306 + Exonic hg19 BRCA TCGA-A2-A0T0-01A 2 0 5'UTR-CDS Intra-chr q33.1 q35.1 Oncogene Tumor suppressor gene 20610 ChimerSeq STARFusion TCGA_RNA-Seq CPNE1-ERCC6 CPNE1 chr20 34252682 - ERCC6 chr10 50732823 - Exonic hg19 BRCA TCGA-A7-A2KD-01A 153 292 5'UTR-CDS Inter-chr q11.22 q11.23 Seq+ 20611 ChimerSeq STARFusion TCGA_RNA-Seq RBM12-ERCC6 RBM12 chr20 34252682 - ERCC6 chr10 50732823 - Exonic hg19 BRCA TCGA-A7-A2KD-01A 153 292 5'UTR-CDS Inter-chr q11.22 q11.23 20612 ChimerSeq STARFusion TCGA_RNA-Seq GSE1-METTL23 GSE1 chr16 85647004 + METTL23 chr17 74729060 + Exonic hg19 BRCA TCGA-A7-A2KD-01A 61 265 Out-of-frame Inter-chr q24.1 q25.1 Seq+ 20613 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-JMJD6 SEPT9 chr17 75277636 + JMJD6 chr17 74721937 - Exonic hg19 BRCA TCGA-A7-A2KD-01A 58 125 Out-of-frame Intra-chr q25.1 Seq+ 20614 ChimerSeq STARFusion TCGA_RNA-Seq CPNE1-ERCC6 CPNE1 chr20 34252724 - ERCC6 chr10 50732823 - Exonic hg19 BRCA TCGA-A7-A2KD-01A 16 292 5'UTR-CDS Inter-chr q11.22 q11.23 Seq+ 20615 ChimerSeq STARFusion TCGA_RNA-Seq RBM12-ERCC6 RBM12 chr20 34252724 - ERCC6 chr10 50732823 - Exonic hg19 BRCA TCGA-A7-A2KD-01A 16 292 5'UTR-CDS Inter-chr q11.22 q11.23 20616 ChimerSeq STARFusion TCGA_RNA-Seq GSE1-METTL23 GSE1 chr16 85647004 + METTL23 chr17 74729375 + Exonic hg19 BRCA TCGA-A7-A2KD-01A 16 265 Out-of-frame Inter-chr q24.1 q25.1 Seq+ 20617 ChimerSeq STARFusion TCGA_RNA-Seq GSE1-METTL23 GSE1 chr16 85645137 + METTL23 chr17 74729060 + Exonic hg19 BRCA TCGA-A7-A2KD-01A 12 265 Out-of-frame Inter-chr q24.1 q25.1 Seq+ 20618 ChimerSeq STARFusion TCGA_RNA-Seq RPSAP58-ZNF486 RPSAP58 chr19 23945936 + ZNF486 chr19 20307773 + Exonic hg19 BRCA TCGA-A7-A2KD-01A 15 66 5'UTR-CDS Intra-chr p12 p12 Transcription factor 20619 ChimerSeq STARFusion TCGA_RNA-Seq ZNF136-RNASEH2A ZNF136 chr19 12274021 + RNASEH2A chr19 12917822 + Exonic hg19 BRCA TCGA-A7-A2KD-01A 13 35 Out-of-frame Intra-chr p13.2 Transcription factor p13.13 Seq+ 20620 ChimerSeq STARFusion TCGA_RNA-Seq ERCC6-PREX1 ERCC6 chr10 50736463 - PREX1 chr20 47324959 - Exonic hg19 BRCA TCGA-A7-A2KD-01A 10 34 Out-of-frame Inter-chr q11.23 q13.13 Seq+ 20621 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT1-FAM201A B4GALT1 chr9 33135187 - FAM201A chr9 38621829 + Exonic hg19 BRCA TCGA-A7-A2KD-01A 3 61 CDS-5'UTR Intra-chr p21.1 p13.1 Seq+ 20622 ChimerSeq STARFusion TCGA_RNA-Seq STX8-HSD17B4 STX8 chr17 9395146 - HSD17B4 chr5 118792010 + Exonic hg19 BRCA TCGA-A7-A2KD-01A 6 31 In-Frame Inter-chr p13.1 q23.1 Seq+ 20623 ChimerSeq STARFusion TCGA_RNA-Seq ZNF136-RNASEH2A ZNF136 chr19 12274021 + RNASEH2A chr19 12918233 + Exonic hg19 BRCA TCGA-A7-A2KD-01A 2 35 Out-of-frame Intra-chr p13.2 Transcription factor p13.13 Seq+ 20624 ChimerSeq STARFusion TCGA_RNA-Seq HSPA14-MRPS35 HSPA14 chr10 14882156 + MRPS35 chr12 27888380 + Exonic hg19 BRCA TCGA-A7-A2KD-01A 5 21 Out-of-frame Inter-chr p13 p11.22 Seq+ 20625 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0100-TEX14 KIAA0100 chr17 26965270 - TEX14 chr17 56692706 - Exonic hg19 BRCA TCGA-A7-A2KD-01A 4 16 Out-of-frame Intra-chr q11.2 q22 Seq+ 20626 ChimerSeq STARFusion TCGA_RNA-Seq IFI44L-SLC44A3 IFI44L chr1 79086256 + SLC44A3 chr1 95322891 + Exonic hg19 BRCA TCGA-A7-A2KD-01A 3 19 5'UTR-CDS Intra-chr p31.1 p21.3 Seq+ 20627 ChimerSeq STARFusion TCGA_RNA-Seq LINC00649-TTC3 LINC00649 chr21 35304046 + TTC3 chr21 38463593 + Exonic hg19 BRCA TCGA-A7-A2KD-01A 7 1 Out-of-frame Intra-chr q22.11 q22.13 20628 ChimerSeq STARFusion TCGA_RNA-Seq ADNP2-L3MBTL4 ADNP2 chr18 77867356 + L3MBTL4 chr18 6215834 - Exonic hg19 BRCA TCGA-A7-A2KD-01A 5 6 5'UTR-CDS Intra-chr q23 Transcription factor p11.31 Tumor suppressor gene Transcription factor Seq+ 20629 ChimerSeq STARFusion TCGA_RNA-Seq PCGF2-SSRP1 PCGF2 chr17 36895005 - SSRP1 chr11 57095851 - Exonic hg19 BRCA TCGA-A7-A2KD-01A 4 1 Out-of-frame Inter-chr Tumor suppressor gene Transcription factor q12.1 20630 ChimerSeq STARFusion TCGA_RNA-Seq DSCR3-TTC3 DSCR3 chr21 38639539 - TTC3 chr21 38480692 + Exonic hg19 BRCA TCGA-A7-A2KD-01A 3 2 Out-of-frame Intra-chr q22.13 q22.13 Seq+ 20631 ChimerSeq STARFusion TCGA_RNA-Seq TEX14-TMEM98 TEX14 chr17 56692593 - TMEM98 chr17 31263350 + Exonic hg19 BRCA TCGA-A7-A2KD-01A 2 6 Out-of-frame Intra-chr q22 q11.2 Seq+ 20632 ChimerSeq STARFusion TCGA_RNA-Seq TP53I11-NDST1 TP53I11 chr11 44954587 - NDST1 chr5 149922406 + Exonic hg19 BRCA TCGA-A7-A2KD-01A 3 1 Out-of-frame Inter-chr p11.2 q33.1 20633 ChimerSeq STARFusion TCGA_RNA-Seq RPSAP58-ZNF273 RPSAP58 chr19 23945936 + ZNF273 chr7 64388032 + Exonic hg19 BRCA TCGA-A7-A2KD-01A 2 4 5'UTR-5'UTR Inter-chr p12 q11.21 Transcription factor 20634 ChimerSeq STARFusion TCGA_RNA-Seq BBX-RB1 BBX chr3 107245245 + RB1 chr13 48934153 + Exonic hg19 BRCA TCGA-GM-A2DH-01A 9 42 5'UTR-CDS Inter-chr q13.12 Transcription factor q14.2 Oncogene Tumor suppressor gene Seq+ 20635 ChimerSeq STARFusion TCGA_RNA-Seq LRBA-DDX60L LRBA chr4 151336590 - DDX60L chr4 169414036 - Exonic hg19 BRCA TCGA-GM-A2DH-01A 3 8 CDS-5'UTR Intra-chr q31.3 q32.3 Seq+ 20636 ChimerSeq STARFusion TCGA_RNA-Seq SPEN-PLEKHM2 SPEN chr1 16174645 + PLEKHM2 chr1 16053687 + Exonic hg19 BRCA TCGA-GM-A2DH-01A 3 7 In-Frame Intra-chr p36.21 Transcription factor p36.21 Seq+ 20637 ChimerSeq STARFusion TCGA_RNA-Seq SENP5-PIGX SENP5 chr3 196630481 + PIGX chr3 196460630 + Exonic hg19 BRCA TCGA-GM-A2DH-01A 2 9 In-Frame Intra-chr q29 q29 Seq+ 20638 ChimerSeq STARFusion TCGA_RNA-Seq NF2-EIF3D NF2 chr22 30000101 + EIF3D chr22 36908649 - Exonic hg19 BRCA TCGA-V7-A7HQ-01A 3 9 In-Frame Intra-chr q12.2 Oncogene Tumor suppressor gene q12.3 Seq+ 20639 ChimerSeq STARFusion TCGA_RNA-Seq EEF1DP3-TEX26 EEF1DP3 chr13 32520318 + TEX26 chr13 31540359 + Exonic hg19 BRCA TCGA-AR-A24V-01A 14 122 5'UTR-CDS Intra-chr q13.1 q12.3 Seq+ 20640 ChimerSeq STARFusion TCGA_RNA-Seq EEF1DP3-TEX26 EEF1DP3 chr13 32520318 + TEX26 chr13 31526797 + Exonic hg19 BRCA TCGA-AR-A24V-01A 13 122 5'UTR-CDS Intra-chr q13.1 q12.3 Seq+ 20641 ChimerSeq STARFusion TCGA_RNA-Seq EEF1DP3-TEX26 EEF1DP3 chr13 32520318 + TEX26 chr13 31548983 + Exonic hg19 BRCA TCGA-AR-A24V-01A 5 122 5'UTR-CDS Intra-chr q13.1 q12.3 Seq+ 20642 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-C11orf24 PPFIA1 chr11 70118542 + C11orf24 chr11 68030386 - Exonic hg19 BRCA TCGA-AR-A24V-01A 16 64 Out-of-frame Intra-chr q13.3 q13.2 Seq+ 20643 ChimerSeq STARFusion TCGA_RNA-Seq FLJ43663-TSGA13 FLJ43663 chr7 130630479 - TSGA13 chr7 130356628 - Exonic hg19 BRCA TCGA-AR-A24V-01A 12 65 3'UTR-CDS Intra-chr q32.2 20644 ChimerSeq STARFusion TCGA_RNA-Seq FLJ43663-TSGA13 FLJ43663 chr7 130630479 - TSGA13 chr7 130364205 - Exonic hg19 BRCA TCGA-AR-A24V-01A 6 65 3'UTR-CDS Intra-chr q32.2 20645 ChimerSeq STARFusion TCGA_RNA-Seq FSTL4-SLIT3 FSTL4 chr5 132537625 - SLIT3 chr5 168114121 - Exonic hg19 BRCA TCGA-AR-A24V-01A 2 11 In-Frame Intra-chr q31.1 q35.1 Seq+ 20646 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK1-KDM3B EIF2AK1 chr7 6094177 - KDM3B chr5 137717205 + Exonic hg19 BRCA TCGA-AR-A24V-01A 2 0 Out-of-frame Inter-chr p22.1 q31.2 Tumor suppressor gene 20647 ChimerSeq STARFusion TCGA_RNA-Seq EXPH5-SLC35F2 EXPH5 chr11 108464145 - SLC35F2 chr11 107686691 - Exonic hg19 BRCA TCGA-BH-A0AY-01A 3 12 In-Frame Intra-chr q22.3 q22.3 Seq+ 20648 ChimerSeq STARFusion TCGA_RNA-Seq EMILIN2-PSMA6 EMILIN2 chr18 2892484 + PSMA6 chr14 35777200 + Exonic hg19 BRCA TCGA-BH-A0AY-01A 2 1 In-Frame Inter-chr p11.32 q13.2 20649 ChimerSeq STARFusion TCGA_RNA-Seq GNPTG-SEPSECS GNPTG chr16 1402307 + SEPSECS chr4 25160729 - Exonic hg19 BRCA TCGA-BH-A0AY-01A 2 0 Out-of-frame Inter-chr p13.3 p15.2 20650 ChimerSeq STARFusion TCGA_RNA-Seq TOMM20-LOC493754 TOMM20 chr1 235291913 - LOC493754 chr7 66019143 - Exonic hg19 BRCA TCGA-A7-A4SA-01A 4 1 Out-of-frame Inter-chr q42.3 20651 ChimerSeq STARFusion TCGA_RNA-Seq EDARADD-TGFBR3 EDARADD chr1 236572574 + TGFBR3 chr1 92263028 - Exonic hg19 BRCA TCGA-A7-A4SA-01A 3 3 Out-of-frame Intra-chr q42.3 p22.1 Tumor suppressor gene Seq+ 20652 ChimerSeq STARFusion TCGA_RNA-Seq TGFBR3-EDARADD TGFBR3 chr1 92327028 - EDARADD chr1 236572516 + Exonic hg19 BRCA TCGA-A7-A4SA-01A 2 5 In-Frame Intra-chr p22.1 Tumor suppressor gene q42.3 Seq+ 20653 ChimerSeq STARFusion TCGA_RNA-Seq MAGI3-ATF6 MAGI3 chr1 114092253 + ATF6 chr1 161829997 + Exonic hg19 BRCA TCGA-BH-A18H-01A 2 7 Out-of-frame Intra-chr p13.2 q23.3 Transcription factor Seq+ 20654 ChimerSeq STARFusion TCGA_RNA-Seq ANAPC15-TEX40 ANAPC15 chr11 71821134 - TEX40 chr11 64072015 + Exonic hg19 BRCA TCGA-BH-A18H-01A 2 2 Out-of-frame Intra-chr q13.4 20655 ChimerSeq STARFusion TCGA_RNA-Seq POTEF-RWDD3 POTEF chr2 130843387 - RWDD3 chr1 95709767 + Exonic hg19 BRCA TCGA-BH-A18H-01A 2 0 Out-of-frame Inter-chr q21.1 p21.3 20656 ChimerSeq STARFusion TCGA_RNA-Seq TRPM4-PPFIA3 TRPM4 chr19 49675365 + PPFIA3 chr19 49636258 + Exonic hg19 BRCA TCGA-AC-A3W5-01A 5 36 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 20657 ChimerSeq STARFusion TCGA_RNA-Seq TRPM4-PPFIA3 TRPM4 chr19 49675026 + PPFIA3 chr19 49636258 + Exonic hg19 BRCA TCGA-AC-A3W5-01A 4 36 In-Frame Intra-chr q13.33 q13.33 Seq+ 20658 ChimerSeq STARFusion TCGA_RNA-Seq ACLY-AATF ACLY chr17 40054002 - AATF chr17 35343916 + Exonic hg19 BRCA TCGA-AC-A3W5-01A 2 1 In-Frame Intra-chr q21.2 20659 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-STXBP6 PTPRK chr6 128505577 - STXBP6 chr14 25326363 - Exonic hg19 BRCA TCGA-A2-A04W-01A 90 214 In-Frame Inter-chr Tumor suppressor gene q12 Seq+ 20660 ChimerSeq STARFusion TCGA_RNA-Seq SLC35B1-IGFBP4 SLC35B1 chr17 47784327 - IGFBP4 chr17 38609237 + Exonic hg19 BRCA TCGA-A2-A04W-01A 36 106 In-Frame Intra-chr q21.33 q21.2 Tumor suppressor gene Seq+ 20661 ChimerSeq STARFusion TCGA_RNA-Seq NPEPPS-FAM117A NPEPPS chr17 45623359 + FAM117A chr17 47810082 - Exonic hg19 BRCA TCGA-A2-A04W-01A 37 39 In-Frame Intra-chr q21.32 q21.33 Seq+ 20662 ChimerSeq STARFusion TCGA_RNA-Seq LOC440434-FAM117A LOC440434 chr17 36398218 - FAM117A chr17 47810082 - Exonic hg19 BRCA TCGA-A2-A04W-01A 16 55 3'UTR-CDS Intra-chr q21.33 20663 ChimerSeq STARFusion TCGA_RNA-Seq PREP-DCBLD1 PREP chr6 105771540 - DCBLD1 chr6 117824930 + Exonic hg19 BRCA TCGA-A2-A04W-01A 9 36 Out-of-frame Intra-chr q21 q22.1 Seq+ 20664 ChimerSeq STARFusion TCGA_RNA-Seq RARA-CDK12 RARA chr17 38465538 + CDK12 chr17 37646810 + Exonic hg19 BRCA TCGA-A2-A04W-01A 5 24 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q12 Oncogene Seq+ 20665 ChimerSeq STARFusion TCGA_RNA-Seq RARA-CDK12 RARA chr17 38474700 + CDK12 chr17 37646810 + Exonic hg19 BRCA TCGA-A2-A04W-01A 5 24 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q12 Oncogene Seq+ 20666 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-SLC35B1 SSH2 chr17 27957798 - SLC35B1 chr17 47778872 - Exonic hg19 BRCA TCGA-A2-A04W-01A 5 20 3'UTR-CDS Intra-chr q11.2 q21.33 Seq+ 20667 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-SLC35B1 SSH2 chr17 27977672 - SLC35B1 chr17 47778872 - Exonic hg19 BRCA TCGA-A2-A04W-01A 4 20 Out-of-frame Intra-chr q11.2 q21.33 Seq+ 20668 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-SLC35B1 SSH2 chr17 27975162 - SLC35B1 chr17 47778872 - Exonic hg19 BRCA TCGA-A2-A04W-01A 4 20 Out-of-frame Intra-chr q11.2 q21.33 Seq+ 20669 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-SLC35B1 SSH2 chr17 27962986 - SLC35B1 chr17 47778872 - Exonic hg19 BRCA TCGA-A2-A04W-01A 2 20 Out-of-frame Intra-chr q11.2 q21.33 Seq+ 20670 ChimerSeq STARFusion TCGA_RNA-Seq VPS13D-RERE VPS13D chr1 12294420 + RERE chr1 8601377 - Exonic hg19 BRCA TCGA-A2-A04W-01A 5 5 Out-of-frame Intra-chr p36.22 p36.23 Seq+ 20671 ChimerSeq STARFusion TCGA_RNA-Seq ACOT7-TTC34 ACOT7 chr1 6453317 - TTC34 chr1 2577002 - Exonic hg19 BRCA TCGA-A2-A04W-01A 2 10 Out-of-frame Intra-chr p36.31 Seq+ 20672 ChimerSeq STARFusion TCGA_RNA-Seq MAN1A1-ARHGAP18 MAN1A1 chr6 119611848 - ARHGAP18 chr6 129939997 - Exonic hg19 BRCA TCGA-A2-A04W-01A 2 10 In-Frame Intra-chr q22.31 q22.33 Seq+ 20673 ChimerSeq STARFusion TCGA_RNA-Seq HTATSF1-BRS3 HTATSF1 chrX 135586622 + BRS3 chrX 135572292 + Exonic hg19 BRCA TCGA-A2-A04W-01A 3 3 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 20674 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-TBC1D3H FBXL20 chr17 37557614 - TBC1D3H chr17 34755466 - Exonic hg19 BRCA TCGA-A2-A04W-01A 3 2 CDS-5'UTR Intra-chr q12 q12 20675 ChimerSeq STARFusion TCGA_RNA-Seq ITGAL-MCAM ITGAL chr16 30534272 + MCAM chr11 119179695 - Exonic hg19 BRCA TCGA-A2-A04W-01A 3 0 Out-of-frame Inter-chr p11.2 q23.3 20676 ChimerSeq STARFusion TCGA_RNA-Seq MAN1A1-LCOR MAN1A1 chr6 119628061 - LCOR chr10 98667022 + Exonic hg19 BRCA TCGA-A2-A04W-01A 2 3 CDS-5'UTR Inter-chr q22.31 q24.1 Transcription factor Seq+ 20677 ChimerSeq STARFusion TCGA_RNA-Seq MED23-BEND3 MED23 chr6 131946005 - BEND3 chr6 107420500 - Exonic hg19 BRCA TCGA-A2-A04W-01A 2 3 CDS-5'UTR Intra-chr q23.2 q21 Seq+ 20678 ChimerSeq STARFusion TCGA_RNA-Seq NRP1-VSTM4 NRP1 chr10 33619636 - VSTM4 chr10 50227820 - Exonic hg19 BRCA TCGA-D8-A1JH-01A 3 38 Out-of-frame Intra-chr p11.22 q11.23 Seq+ 20679 ChimerSeq STARFusion TCGA_RNA-Seq COL5A2-YWHAQ COL5A2 chr2 189936766 - YWHAQ chr2 9731644 - Exonic hg19 BRCA TCGA-D8-A1JH-01A 2 1 In-Frame Intra-chr q32.2 p25.1 20680 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 BRCA TCGA-D8-A1JH-01A 2 0 In-Frame Intra-chr p11.21 p11.21 20681 ChimerSeq STARFusion TCGA_RNA-Seq LRRC59-NUP107 LRRC59 chr17 48469759 - NUP107 chr12 69135593 + Exonic hg19 BRCA TCGA-A8-A0A7-01A 653 1151 In-Frame Inter-chr q21.33 q15 Seq+ 20682 ChimerSeq STARFusion TCGA_RNA-Seq RARA-CA10 RARA chr17 38474700 + CA10 chr17 50149753 - Exonic hg19 BRCA TCGA-A8-A0A7-01A 24 165 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 20683 ChimerSeq STARFusion TCGA_RNA-Seq LOC100131691-UBE2M LOC100131691 chr19 59070776 + UBE2M chr19 59068524 - Exonic hg19 BRCA TCGA-A8-A0A7-01A 24 76 5'UTR-CDS Intra-chr q13.43 20684 ChimerSeq STARFusion TCGA_RNA-Seq LOC100131691-UBE2MP1 LOC100131691 chr19 59070775 + UBE2MP1 chr16 34404505 - Exonic hg19 BRCA TCGA-A8-A0A7-01A 8 21 Out-of-frame Inter-chr p11.2 20685 ChimerSeq STARFusion TCGA_RNA-Seq G2E3-SCFD1 G2E3 chr14 31028478 + SCFD1 chr14 31203996 + Exonic hg19 BRCA TCGA-A8-A0A7-01A 6 23 5'UTR-5'UTR Intra-chr q12 q12 20686 ChimerSeq STARFusion TCGA_RNA-Seq NLRC5-CPNE2 NLRC5 chr16 57075486 + CPNE2 chr16 57179997 + Exonic hg19 BRCA TCGA-A8-A0A7-01A 3 11 Out-of-frame Intra-chr q13 q13 20687 ChimerSeq STARFusion TCGA_RNA-Seq NLRC5-CPNE2 NLRC5 chr16 57075977 + CPNE2 chr16 57179997 + Exonic hg19 BRCA TCGA-A8-A0A7-01A 3 11 Out-of-frame Intra-chr q13 q13 20688 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-OSBPL8 CPSF6 chr12 69633486 + OSBPL8 chr12 76881398 - Exonic hg19 BRCA TCGA-A8-A0A7-01A 3 8 CDS-5'UTR Intra-chr q15 q21.2 Seq+ 20689 ChimerSeq STARFusion TCGA_RNA-Seq NCAN-NR2F6 NCAN chr19 19322873 + NR2F6 chr19 17351574 - Exonic hg19 BRCA TCGA-E9-A1RG-01A 11 68 5'UTR-CDS Intra-chr p13.11 p13.11 Transcription factor Seq+ 20690 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R12B-TIMM17A PPP1R12B chr1 202412255 + TIMM17A chr1 201939316 + Exonic hg19 BRCA TCGA-E9-A1RG-01A 3 17 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 20691 ChimerSeq STARFusion TCGA_RNA-Seq LINS-WRAP53 LINS chr15 101142326 - WRAP53 chr17 7591966 + Exonic hg19 BRCA TCGA-E9-A1RG-01A 2 3 5'UTR-5'UTR Inter-chr p13.1 20692 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 BRCA TCGA-E9-A1RG-01A 2 1 In-Frame Intra-chr p11.21 p11.21 20693 ChimerSeq STARFusion TCGA_RNA-Seq FBXL5-USP53 FBXL5 chr4 15613889 - USP53 chr4 120177401 + Exonic hg19 BRCA TCGA-E2-A1B4-01A 2 0 Out-of-frame Intra-chr p15.32 q26 20694 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-FADS1 MALAT1 chr11 65266583 + FADS1 chr11 61570938 - Exonic hg19 BRCA TCGA-LL-A6FQ-01A 177 556 Out-of-frame Intra-chr q13.1 q12.2 Seq+ 20695 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-FADS1 MALAT1 chr11 65268908 + FADS1 chr11 61570931 - Exonic hg19 BRCA TCGA-LL-A6FQ-01A 90 556 5'UTR-CDS Intra-chr q13.1 q12.2 Seq+ 20696 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-FADS1 MALAT1 chr11 65268285 + FADS1 chr11 61570931 - Exonic hg19 BRCA TCGA-LL-A6FQ-01A 52 556 5'UTR-CDS Intra-chr q13.1 q12.2 Seq+ 20697 ChimerSeq STARFusion TCGA_RNA-Seq PLCB3-PGA5 PLCB3 chr11 64023088 + PGA5 chr11 61013418 + Exonic hg19 BRCA TCGA-LL-A6FQ-01A 37 49 In-Frame Intra-chr q13.1 Tumor suppressor gene q12.2 Seq+ 20698 ChimerSeq STARFusion TCGA_RNA-Seq PLCB3-PGA3 PLCB3 chr11 64023088 + PGA3 chr11 60975763 + Exonic hg19 BRCA TCGA-LL-A6FQ-01A 2 62 In-Frame Intra-chr q13.1 Tumor suppressor gene q12.2 Seq+ 20699 ChimerSeq STARFusion TCGA_RNA-Seq NEU3-POLA2 NEU3 chr11 74705765 + POLA2 chr11 65043363 + Exonic hg19 BRCA TCGA-LL-A6FQ-01A 10 16 In-Frame Intra-chr q13.4 q13.1 Seq+ 20700 ChimerSeq STARFusion TCGA_RNA-Seq RAP1GAP-USP48 RAP1GAP chr1 21976254 - USP48 chr1 22007327 - Exonic hg19 BRCA TCGA-LL-A6FQ-01A 9 7 Out-of-frame Intra-chr p36.12 Tumor suppressor gene p36.12 Seq+ 20701 ChimerSeq STARFusion TCGA_RNA-Seq LRP5-MADD LRP5 chr11 68208849 + MADD chr11 47345222 + Exonic hg19 BRCA TCGA-LL-A6FQ-01A 3 19 Out-of-frame Intra-chr q13.2 p11.2 Tumor suppressor gene Seq+ 20702 ChimerSeq STARFusion TCGA_RNA-Seq THRAP3-MAP7D1 THRAP3 chr1 36690106 + MAP7D1 chr1 36636572 + Exonic hg19 BRCA TCGA-LL-A6FQ-01A 6 7 5'UTR-CDS Intra-chr p34.3 p34.3 Seq+ 20703 ChimerSeq STARFusion TCGA_RNA-Seq NEU3-POLA2 NEU3 chr11 74700199 + POLA2 chr11 65043363 + Exonic hg19 BRCA TCGA-LL-A6FQ-01A 2 16 Out-of-frame Intra-chr q13.4 q13.1 Seq+ 20704 ChimerSeq STARFusion TCGA_RNA-Seq PLCB3-PGA4 PLCB3 chr11 64023088 + PGA4 chr11 60994592 + Exonic hg19 BRCA TCGA-LL-A6FQ-01A 5 2 In-Frame Intra-chr q13.1 Tumor suppressor gene q12.2 20705 ChimerSeq STARFusion TCGA_RNA-Seq C11orf49-PPME1 C11orf49 chr11 46958402 + PPME1 chr11 73941290 + Exonic hg19 BRCA TCGA-LL-A6FQ-01A 2 12 Out-of-frame Intra-chr p11.2 q13.4 Seq+ 20706 ChimerSeq STARFusion TCGA_RNA-Seq CELF1-LUZP2 CELF1 chr11 47521005 - LUZP2 chr11 25071584 + Exonic hg19 BRCA TCGA-LL-A6FQ-01A 2 8 Out-of-frame Intra-chr p11.2 p14.3 Seq+ 20707 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 BRCA TCGA-LL-A6FQ-01A 3 1 In-Frame Intra-chr p11.21 p11.21 20708 ChimerSeq STARFusion TCGA_RNA-Seq TYW1-INTS4L1 TYW1 chr7 66582605 + INTS4L1 chr7 64628127 + Exonic hg19 BRCA TCGA-E9-A1R4-01A 3 6 CDS-5'UTR Intra-chr q11.21 20709 ChimerSeq STARFusion TCGA_RNA-Seq FAM157B-LMF1 FAM157B chr9 141134179 + LMF1 chr16 1004666 - Exonic hg19 BRCA TCGA-E9-A1R4-01A 2 5 3'UTR-3'UTR Inter-chr q34.3 p13.3 20710 ChimerSeq STARFusion TCGA_RNA-Seq RPS8-C1orf228 RPS8 chr1 45243801 + C1orf228 chr1 45189794 + Exonic hg19 BRCA TCGA-E2-A1AZ-01A 7 26 3'UTR-CDS Intra-chr p34.1 p34.1 Seq+ 20711 ChimerSeq STARFusion TCGA_RNA-Seq SRC-MANBAL SRC chr20 35974658 + MANBAL chr20 35929611 + Exonic hg19 BRCA TCGA-E2-A1AZ-01A 4 3 5'UTR-5'UTR Intra-chr q11.23 TK:Src Oncogene q11.23 Seq+ 20712 ChimerSeq STARFusion TCGA_RNA-Seq LOC440434-NPEPPS LOC440434 chr17 36358299 - NPEPPS chr17 45663731 + Exonic hg19 BRCA TCGA-E2-A1AZ-01A 3 2 3'UTR-CDS Intra-chr q21.32 20713 ChimerSeq STARFusion TCGA_RNA-Seq KIF13B-EPN2 KIF13B chr8 29102863 - EPN2 chr17 19185268 + Exonic hg19 BRCA TCGA-B6-A0WV-01A 13 27 CDS-5'UTR Inter-chr p12 p11.2 Seq+ 20714 ChimerSeq STARFusion TCGA_RNA-Seq KIF13B-EPN2 KIF13B chr8 29120497 - EPN2 chr17 19185268 + Exonic hg19 BRCA TCGA-B6-A0WV-01A 2 27 CDS-5'UTR Inter-chr p12 p11.2 Seq+ 20715 ChimerSeq STARFusion TCGA_RNA-Seq MED24-SSH2 MED24 chr17 38209551 - SSH2 chr17 28030080 - Exonic hg19 BRCA TCGA-B6-A0WV-01A 2 9 Out-of-frame Intra-chr q21.1 q11.2 Seq+ 20716 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-AKAP12 ESR1 chr6 152201906 + AKAP12 chr6 151676862 + Exonic hg19 BRCA TCGA-B6-A0WV-01A 2 3 CDS-3'UTR Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 Tumor suppressor gene 20717 ChimerSeq STARFusion TCGA_RNA-Seq FNBP4-STIP1 FNBP4 chr11 47752926 - STIP1 chr11 63970348 + Exonic hg19 BRCA TCGA-B6-A0WV-01A 2 1 Out-of-frame Intra-chr p11.2 q13.1 20718 ChimerSeq STARFusion TCGA_RNA-Seq DCAF5-RAB5B DCAF5 chr14 69619482 - RAB5B chr12 56380653 + Exonic hg19 BRCA TCGA-AN-A0AS-01A 5 19 CDS-5'UTR Inter-chr q24.1 q13.2 Seq+ 20719 ChimerSeq STARFusion TCGA_RNA-Seq ANXA7-LGALS12 ANXA7 chr10 75156277 - LGALS12 chr11 63276025 + Exonic hg19 BRCA TCGA-AN-A0AS-01A 6 13 In-Frame Inter-chr q22.2 Tumor suppressor gene q12.3 Seq+ 20720 ChimerSeq STARFusion TCGA_RNA-Seq TSC22D1-DNAJC5B TSC22D1 chr13 45147299 - DNAJC5B chr8 66988895 + Exonic hg19 BRCA TCGA-AN-A0AS-01A 5 9 In-Frame Inter-chr q14.11 Tumor suppressor gene Transcription factor q13.1 Seq+ 20721 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A9-USP15 SLC39A9 chr14 69890919 + USP15 chr12 62783211 + Exonic hg19 BRCA TCGA-AN-A0AS-01A 6 4 Out-of-frame Inter-chr q24.1 q14.1 Seq+ 20722 ChimerSeq STARFusion TCGA_RNA-Seq IMPAD1-ZCCHC24 IMPAD1 chr8 57905758 - ZCCHC24 chr10 81154196 - Exonic hg19 BRCA TCGA-AN-A0AS-01A 4 8 In-Frame Inter-chr q12.1 q22.3 Seq+ 20723 ChimerSeq STARFusion TCGA_RNA-Seq PPME1-NARS2 PPME1 chr11 73915490 + NARS2 chr11 78239982 - Exonic hg19 BRCA TCGA-AN-A0AS-01A 2 16 In-Frame Intra-chr q13.4 q14.1 Seq+ 20724 ChimerSeq STARFusion TCGA_RNA-Seq LGALS12-PLAC9 LGALS12 chr11 63277973 + PLAC9 chr10 81901838 + Exonic hg19 BRCA TCGA-AN-A0AS-01A 2 5 Out-of-frame Inter-chr q12.3 q22.3 Seq+ 20725 ChimerSeq STARFusion TCGA_RNA-Seq DCAF5-DPY19L2 DCAF5 chr14 69619482 - DPY19L2 chr12 64055261 - Exonic hg19 BRCA TCGA-AN-A0AS-01A 2 2 Out-of-frame Inter-chr q24.1 q14.2 Seq+ 20726 ChimerSeq STARFusion TCGA_RNA-Seq ENTPD3-CHMP1A ENTPD3 chr3 40442502 + CHMP1A chr16 89713739 - Exonic hg19 BRCA TCGA-AN-A0AS-01A 2 0 3'UTR-3'UTR Inter-chr p22.1 q24.3 20727 ChimerSeq STARFusion TCGA_RNA-Seq PNPLA7-WDR85 PNPLA7 chr9 140409831 - WDR85 chr9 140450100 - Exonic hg19 BRCA TCGA-A7-A426-01A 22 55 In-Frame Intra-chr q34.3 Seq+ 20728 ChimerSeq STARFusion TCGA_RNA-Seq RSRC2-VPS37B RSRC2 chr12 123005932 - VPS37B chr12 123355608 - Exonic hg19 BRCA TCGA-A7-A426-01A 2 1 In-Frame Intra-chr q24.31 q24.31 Seq+ 20729 ChimerSeq STARFusion TCGA_RNA-Seq ARID1A-YTHDF2 ARID1A chr1 27059283 + YTHDF2 chr1 29064170 + Exonic hg19 BRCA TCGA-E2-A14T-01A 62 156 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p35.3 Seq+ 20730 ChimerSeq STARFusion TCGA_RNA-Seq MLF2-PTMS MLF2 chr12 6860807 - PTMS chr12 6878769 + Exonic hg19 BRCA TCGA-E2-A14T-01A 15 69 In-Frame Intra-chr p13.31 p13.31 Seq+ 20731 ChimerSeq STARFusion TCGA_RNA-Seq TMEM117-ZCRB1 TMEM117 chr12 44238731 + ZCRB1 chr12 42717906 - Exonic hg19 BRCA TCGA-E2-A14T-01A 18 26 CDS-5'UTR Intra-chr q12 q12 Seq+ 20732 ChimerSeq STARFusion TCGA_RNA-Seq HDAC7-IRAK4 HDAC7 chr12 48185042 - IRAK4 chr12 44161906 + Exonic hg19 BRCA TCGA-E2-A14T-01A 7 42 CDS-5'UTR Intra-chr q13.11 q12 TKL:IRAK Seq+ 20733 ChimerSeq STARFusion TCGA_RNA-Seq THRAP3-MUTYH THRAP3 chr1 36690106 + MUTYH chr1 45800183 - Exonic hg19 BRCA TCGA-E2-A14T-01A 5 18 5'UTR-5'UTR Intra-chr p34.3 p34.1 Oncogene Seq+ 20734 ChimerSeq STARFusion TCGA_RNA-Seq PYROXD1-SLC2A14 PYROXD1 chr12 21593382 + SLC2A14 chr12 7985410 - Exonic hg19 BRCA TCGA-E2-A14T-01A 4 21 In-Frame Intra-chr p12.1 p13.31 Seq+ 20735 ChimerSeq STARFusion TCGA_RNA-Seq CASK-GLIPR1L1 CASK chrX 41782183 - GLIPR1L1 chr12 75737473 + Exonic hg19 BRCA TCGA-E2-A14T-01A 2 15 Out-of-frame Inter-chr p11.4 CAMK:CASK q21.2 Seq+ 20736 ChimerSeq STARFusion TCGA_RNA-Seq ERICH1-PCM1 ERICH1 chr8 665861 - PCM1 chr8 17882870 + Exonic hg19 BRCA TCGA-E2-A14T-01A 3 10 Out-of-frame Intra-chr p22 Seq+ 20737 ChimerSeq STARFusion TCGA_RNA-Seq SACS-LINC00466 SACS chr13 23932474 - LINC00466 chr1 63723721 - Exonic hg19 BRCA TCGA-E2-A14T-01A 4 1 CDS-3'UTR Inter-chr q12.12 p31.3 20738 ChimerSeq STARFusion TCGA_RNA-Seq SMS-DYRK2 SMS chrX 21958991 + DYRK2 chr12 68050886 + Exonic hg19 BRCA TCGA-E2-A14T-01A 2 6 Out-of-frame Inter-chr p22.11 q15 CMGC:DYRK Seq+ 20739 ChimerSeq STARFusion TCGA_RNA-Seq SMS-DYRK2 SMS chrX 21958991 + DYRK2 chr12 68043577 + Exonic hg19 BRCA TCGA-E2-A14T-01A 2 6 In-Frame Inter-chr p22.11 q15 CMGC:DYRK Seq+ 20740 ChimerSeq STARFusion TCGA_RNA-Seq LRPPRC-TAF15 LRPPRC chr2 44161329 - TAF15 chr17 34161570 + Exonic hg19 BRCA TCGA-E2-A14T-01A 2 0 Out-of-frame Inter-chr p21 q12 20741 ChimerSeq STARFusion TCGA_RNA-Seq SOS2-NEMF SOS2 chr14 50697915 - NEMF chr14 50262662 - Exonic hg19 BRCA TCGA-AN-A0FF-01A 3 35 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 20742 ChimerSeq STARFusion TCGA_RNA-Seq NF1-CLTC NF1 chr17 29563039 + CLTC chr17 57721637 + Exonic hg19 BRCA TCGA-AR-A252-01A 3 30 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q23.1 Seq+ 20743 ChimerSeq STARFusion TCGA_RNA-Seq MED13-TANC2 MED13 chr17 60042367 - TANC2 chr17 61151304 + Exonic hg19 BRCA TCGA-AR-A252-01A 5 5 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 20744 ChimerSeq STARFusion TCGA_RNA-Seq RTFDC1-PCNT RTFDC1 chr20 55049827 + PCNT chr21 47817928 + Exonic hg19 BRCA TCGA-AR-A252-01A 3 8 Out-of-frame Inter-chr q13.31 q22.3 Seq+ 20745 ChimerSeq STARFusion TCGA_RNA-Seq RTFDC1-PCNT RTFDC1 chr20 55049827 + PCNT chr21 47817179 + Exonic hg19 BRCA TCGA-AR-A252-01A 2 8 Out-of-frame Inter-chr q13.31 q22.3 Seq+ 20746 ChimerSeq STARFusion TCGA_RNA-Seq GGA3-ATF7 GGA3 chr17 73235870 - ATF7 chr12 53901811 - Exonic hg19 BRCA TCGA-GM-A2DL-01A 5 12 3'UTR-3'UTR Inter-chr q25.1 q13.13 Transcription factor Seq+ 20747 ChimerSeq STARFusion TCGA_RNA-Seq TAF1D-TRIM49 TAF1D chr11 93474488 - TRIM49 chr11 89540452 - Exonic hg19 BRCA TCGA-GM-A2DL-01A 2 9 5'UTR-5'UTR Intra-chr q21 q14.3 Seq+ 20748 ChimerSeq STARFusion TCGA_RNA-Seq CHD9-AKTIP CHD9 chr16 53088989 + AKTIP chr16 53534241 - Exonic hg19 BRCA TCGA-GM-A2DL-01A 2 2 5'UTR-5'UTR Intra-chr q12.2 q12.2 20749 ChimerSeq STARFusion TCGA_RNA-Seq EPRS-DNAH14 EPRS chr1 220160484 - DNAH14 chr1 225506285 + Exonic hg19 BRCA TCGA-A7-A26I-01B 30 31 Out-of-frame Intra-chr q41 q42.12 Seq+ 20750 ChimerSeq STARFusion TCGA_RNA-Seq CLPTM1-CYP2A7 CLPTM1 chr19 45488561 + CYP2A7 chr19 41386533 - Exonic hg19 BRCA TCGA-A7-A26I-01B 15 58 Out-of-frame Intra-chr q13.32 q13.2 Seq+ 20751 ChimerSeq STARFusion TCGA_RNA-Seq ADCY9-CREBBP ADCY9 chr16 4163751 - CREBBP chr16 3901010 - Exonic hg19 BRCA TCGA-A7-A26I-01B 10 37 In-Frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene 20752 ChimerSeq STARFusion TCGA_RNA-Seq PTPRA-VPS16 PTPRA chr20 2854406 + VPS16 chr20 2840365 + Exonic hg19 BRCA TCGA-A7-A26I-01B 2 6 5'UTR-CDS Intra-chr p13 p13 Seq+ 20753 ChimerSeq STARFusion TCGA_RNA-Seq UBE2O-PRPSAP1 UBE2O chr17 74448807 - PRPSAP1 chr17 74309972 - Exonic hg19 BRCA TCGA-A7-A26I-01B 3 2 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 20754 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-DOCK1 RCC1 chr1 28834672 + DOCK1 chr10 128768966 + Exonic hg19 BRCA TCGA-A7-A26I-01B 2 1 5'UTR-CDS Inter-chr p35.3 q26.2 Seq+ 20755 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-DOCK1 SNHG3 chr1 28834672 + DOCK1 chr10 128768966 + Exonic hg19 BRCA TCGA-A7-A26I-01B 2 1 5'UTR-CDS Inter-chr p35.3 q26.2 20756 ChimerSeq STARFusion TCGA_RNA-Seq SUB1-NPR3 SUB1 chr5 32591791 + NPR3 chr5 32724804 + Exonic hg19 BRCA TCGA-A7-A26I-01B 2 1 Out-of-frame Intra-chr p13.3 p13.3 20757 ChimerSeq STARFusion TCGA_RNA-Seq THBS1-EXT1 THBS1 chr15 39873429 + EXT1 chr8 118849440 - Exonic hg19 BRCA TCGA-A7-A26I-01B 2 1 5'UTR-CDS Inter-chr q14 Oncogene Tumor suppressor gene q24.11 Oncogene Tumor suppressor gene 20758 ChimerSeq STARFusion TCGA_RNA-Seq PTK2B-GNAS PTK2B chr8 27183198 + GNAS chr20 57470667 + Exonic hg19 BRCA TCGA-A7-A26I-01B 2 0 5'UTR-5'UTR Inter-chr p21.2 q13.32 Oncogene 20759 ChimerSeq STARFusion TCGA_RNA-Seq COL1A2-MBNL1 COL1A2 chr7 94027071 + MBNL1 chr3 151987554 + Exonic hg19 BRCA TCGA-D8-A1Y1-01A 8 2 Out-of-frame Inter-chr q21.3 q25.1 20760 ChimerSeq STARFusion TCGA_RNA-Seq NAIP-OCLN NAIP chr5 70269956 - OCLN chr5 68830521 + Exonic hg19 BRCA TCGA-D8-A1Y1-01A 3 13 Out-of-frame Intra-chr q13.2 q13.2 20761 ChimerSeq STARFusion TCGA_RNA-Seq MYSM1-ALG14 MYSM1 chr1 59165657 - ALG14 chr1 95448862 - Exonic hg19 BRCA TCGA-A7-A5ZV-01A 20 128 Out-of-frame Intra-chr p32.1 Transcription factor p21.3 Seq+ 20762 ChimerSeq STARFusion TCGA_RNA-Seq TMEM45A-CMSS1 TMEM45A chr3 100211772 + CMSS1 chr3 99879274 + Exonic hg19 BRCA TCGA-A7-A5ZV-01A 15 122 Out-of-frame Intra-chr q12.2 q12.1 Seq+ 20763 ChimerSeq STARFusion TCGA_RNA-Seq ZFP91-LPXN ZFP91 chr11 58347095 + LPXN chr11 58338186 - Exonic hg19 BRCA TCGA-A7-A5ZV-01A 4 40 Out-of-frame Intra-chr q12.1 Transcription factor q12.1 Seq+ 20764 ChimerSeq STARFusion TCGA_RNA-Seq TUBB6-ROBO1 TUBB6 chr18 12311052 + ROBO1 chr3 78685258 - Exonic hg19 BRCA TCGA-A7-A5ZV-01A 7 22 In-Frame Inter-chr p11.21 p12.3 Tumor suppressor gene Seq+ 20765 ChimerSeq STARFusion TCGA_RNA-Seq PHIP-INADL PHIP chr6 79707131 - INADL chr1 62271120 + Exonic hg19 BRCA TCGA-A7-A5ZV-01A 5 12 Out-of-frame Inter-chr q14.1 Seq+ 20766 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD28-TYR ANKRD28 chr3 15900884 - TYR chr11 89017941 + Exonic hg19 BRCA TCGA-A7-A5ZV-01A 3 4 Out-of-frame Inter-chr p25.1 q14.3 20767 ChimerSeq STARFusion TCGA_RNA-Seq GPBP1L1-UTP14A GPBP1L1 chr1 46151248 - UTP14A chrX 129041343 + Exonic hg19 BRCA TCGA-A7-A5ZV-01A 2 2 5'UTR-CDS Inter-chr p34.1 Transcription factor q26.1 Seq+ 20768 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-RNF216 ACTB chr7 5570155 - RNF216 chr7 5756397 - Exonic hg19 BRCA TCGA-BH-A18T-01A 27 337 3'UTR-CDS Intra-chr p22.1 p22.1 Seq+ 20769 ChimerSeq STARFusion TCGA_RNA-Seq UBE2J2-GNB1 UBE2J2 chr1 1203242 - GNB1 chr1 1736020 - Exonic hg19 BRCA TCGA-BH-A18T-01A 5 218 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 20770 ChimerSeq STARFusion TCGA_RNA-Seq UBE2J2-GNB1 UBE2J2 chr1 1209046 - GNB1 chr1 1736020 - Exonic hg19 BRCA TCGA-BH-A18T-01A 3 218 5'UTR-CDS Intra-chr p36.33 p36.33 Seq+ 20771 ChimerSeq STARFusion TCGA_RNA-Seq UBE2J2-GNB1 UBE2J2 chr1 1203242 - GNB1 chr1 1724750 - Exonic hg19 BRCA TCGA-BH-A18T-01A 3 218 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 20772 ChimerSeq STARFusion TCGA_RNA-Seq UBE2J2-GNB1 UBE2J2 chr1 1209046 - GNB1 chr1 1724750 - Exonic hg19 BRCA TCGA-BH-A18T-01A 2 218 5'UTR-CDS Intra-chr p36.33 p36.33 Seq+ 20773 ChimerSeq STARFusion TCGA_RNA-Seq HUWE1-PHF8 HUWE1 chrX 53634484 - PHF8 chrX 53970676 - Exonic hg19 BRCA TCGA-BH-A18T-01A 27 76 Out-of-frame Intra-chr p11.22 p11.22 Seq+ 20774 ChimerSeq STARFusion TCGA_RNA-Seq MYO5B-DYM MYO5B chr18 47721137 - DYM chr18 46645296 - Exonic hg19 BRCA TCGA-BH-A18T-01A 13 26 In-Frame Intra-chr q21.1 q21.1 Seq+ 20775 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF11-ETV3 ARHGEF11 chr1 157014091 - ETV3 chr1 157106157 - Exonic hg19 BRCA TCGA-BH-A18T-01A 6 37 CDS-5'UTR Intra-chr q23.1 q23.1 Transcription factor Seq+ 20776 ChimerSeq STARFusion TCGA_RNA-Seq ZNF318-PDE3A ZNF318 chr6 43310414 - PDE3A chr12 20709594 + Exonic hg19 BRCA TCGA-BH-A18T-01A 9 25 In-Frame Inter-chr p21.1 Transcription factor p12.2 Seq+ 20777 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT6-KCNB2 AGPAT6 chr8 41435797 + KCNB2 chr8 73848170 + Exonic hg19 BRCA TCGA-BH-A18T-01A 9 21 5'UTR-CDS Intra-chr q21.11 Seq+ 20778 ChimerSeq STARFusion TCGA_RNA-Seq C11orf80-BBS1 C11orf80 chr11 66526567 + BBS1 chr11 66294120 + Exonic hg19 BRCA TCGA-BH-A18T-01A 9 19 In-Frame Intra-chr q13.2 q13.2 Seq+ 20779 ChimerSeq STARFusion TCGA_RNA-Seq WNK1-PRMT8 WNK1 chr12 971436 + PRMT8 chr12 3649772 + Exonic hg19 BRCA TCGA-BH-A18T-01A 8 16 In-Frame Intra-chr p13.33 p13.32 Seq+ 20780 ChimerSeq STARFusion TCGA_RNA-Seq PDE4B-GADD45A PDE4B chr1 66834652 + GADD45A chr1 68151708 + Exonic hg19 BRCA TCGA-BH-A18T-01A 8 13 Out-of-frame Intra-chr p31.3 p31.3 Tumor suppressor gene Seq+ 20781 ChimerSeq STARFusion TCGA_RNA-Seq MROH1-GPAA1 MROH1 chr8 145223343 + GPAA1 chr8 145138292 + Exonic hg19 BRCA TCGA-BH-A18T-01A 6 17 Out-of-frame Intra-chr q24.3 q24.3 20782 ChimerSeq STARFusion TCGA_RNA-Seq STK10-SH3PXD2B STK10 chr5 171583628 - SH3PXD2B chr5 171849500 - Exonic hg19 BRCA TCGA-BH-A18T-01A 4 21 In-Frame Intra-chr q35.1 Tumor suppressor gene q35.1 Seq+ 20783 ChimerSeq STARFusion TCGA_RNA-Seq CASP8-ALS2CR12 CASP8 chr2 202131514 + ALS2CR12 chr2 202195556 - Exonic hg19 BRCA TCGA-BH-A18T-01A 5 15 In-Frame Intra-chr q33.1 Oncogene Tumor suppressor gene q33.1 Seq+ 20784 ChimerSeq STARFusion TCGA_RNA-Seq PEX14-PGD PEX14 chr1 10535059 + PGD chr1 10459686 + Exonic hg19 BRCA TCGA-BH-A18T-01A 8 2 Out-of-frame Intra-chr p36.22 p36.22 Seq+ 20785 ChimerSeq STARFusion TCGA_RNA-Seq MRPS35-PPFIBP1 MRPS35 chr12 27877119 + PPFIBP1 chr12 27829361 + Exonic hg19 BRCA TCGA-BH-A18T-01A 6 9 In-Frame Intra-chr p11.22 p11.23 Seq+ 20786 ChimerSeq STARFusion TCGA_RNA-Seq ZNF318-PDE3A ZNF318 chr6 43316062 - PDE3A chr12 20709594 + Exonic hg19 BRCA TCGA-BH-A18T-01A 2 25 In-Frame Inter-chr p21.1 Transcription factor p12.2 Seq+ 20787 ChimerSeq STARFusion TCGA_RNA-Seq PIEZO1-GALNS PIEZO1 chr16 88782063 - GALNS chr16 88902869 - Exonic hg19 BRCA TCGA-BH-A18T-01A 3 18 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 20788 ChimerSeq STARFusion TCGA_RNA-Seq SGK196-NKAIN3 SGK196 chr8 42958973 + NKAIN3 chr8 63492098 + Exonic hg19 BRCA TCGA-BH-A18T-01A 2 21 In-Frame Intra-chr q12.3 20789 ChimerSeq STARFusion TCGA_RNA-Seq DTNB-RBKS DTNB chr2 25799707 - RBKS chr2 28081438 - Exonic hg19 BRCA TCGA-BH-A18T-01A 3 15 Out-of-frame Intra-chr p23.3 p23.2 Seq+ 20790 ChimerSeq STARFusion TCGA_RNA-Seq CSE1L-ARFGEF2 CSE1L chr20 47711500 + ARFGEF2 chr20 47632817 + Exonic hg19 BRCA TCGA-BH-A18T-01A 5 6 In-Frame Intra-chr q13.13 q13.13 Seq+ 20791 ChimerSeq STARFusion TCGA_RNA-Seq SETD8-C12orf65 SETD8 chr12 123868755 + C12orf65 chr12 123741360 + Exonic hg19 BRCA TCGA-BH-A18T-01A 6 2 Out-of-frame Intra-chr q24.31 Seq+ 20792 ChimerSeq STARFusion TCGA_RNA-Seq MROH1-GPAA1 MROH1 chr8 145223343 + GPAA1 chr8 145139316 + Exonic hg19 BRCA TCGA-BH-A18T-01A 2 17 Out-of-frame Intra-chr q24.3 q24.3 20793 ChimerSeq STARFusion TCGA_RNA-Seq MEMO1-DPY30 MEMO1 chr2 32235256 - DPY30 chr2 32264561 - Exonic hg19 BRCA TCGA-BH-A18T-01A 2 16 CDS-5'UTR Intra-chr p22.3 p22.3 Seq+ 20794 ChimerSeq STARFusion TCGA_RNA-Seq TMEM223-LOC100507412 TMEM223 chr11 62559151 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-BH-A18T-01A 3 5 CDS-5'UTR Inter-chr q12.3 20795 ChimerSeq STARFusion TCGA_RNA-Seq WDSUB1-BAZ2B WDSUB1 chr2 160128213 - BAZ2B chr2 160189197 - Exonic hg19 BRCA TCGA-BH-A18T-01A 2 9 Out-of-frame Intra-chr q24.2 q24.2 Transcription factor Seq+ 20796 ChimerSeq STARFusion TCGA_RNA-Seq WDSUB1-BAZ2B WDSUB1 chr2 160136272 - BAZ2B chr2 160189197 - Exonic hg19 BRCA TCGA-BH-A18T-01A 2 9 Out-of-frame Intra-chr q24.2 q24.2 Transcription factor Seq+ 20797 ChimerSeq STARFusion TCGA_RNA-Seq ACO2-TEF ACO2 chr22 41865186 + TEF chr22 41783355 + Exonic hg19 BRCA TCGA-BH-A18T-01A 2 8 5'UTR-CDS Intra-chr q13.2 q13.2 Transcription factor Seq+ 20798 ChimerSeq STARFusion TCGA_RNA-Seq ROPN1B-ALG1L ROPN1B chr3 125696008 + ALG1L chr3 125652539 - Exonic hg19 BRCA TCGA-BH-A18T-01A 2 8 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 20799 ChimerSeq STARFusion TCGA_RNA-Seq WIBG-CS WIBG chr12 56320860 - CS chr12 56680429 - Exonic hg19 BRCA TCGA-BH-A18T-01A 4 0 Out-of-frame Intra-chr 12q13.2 q13.3 20800 ChimerSeq STARFusion TCGA_RNA-Seq CDC42EP4-SDK2 CDC42EP4 chr17 71308032 - SDK2 chr17 71398280 - Exonic hg19 BRCA TCGA-BH-A18T-01A 3 3 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 20801 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF12-POU2F3 ARHGEF12 chr11 120207984 + POU2F3 chr11 120168974 + Exonic hg19 BRCA TCGA-BH-A18T-01A 3 0 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene Transcription factor Seq+ 20802 ChimerSeq STARFusion TCGA_RNA-Seq CDC42EP4-SDK2 CDC42EP4 chr17 71308032 - SDK2 chr17 71387677 - Exonic hg19 BRCA TCGA-BH-A18T-01A 2 3 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 20803 ChimerSeq STARFusion TCGA_RNA-Seq CASP8-CFLAR CASP8 chr2 202098835 + CFLAR chr2 201994452 + Exonic hg19 BRCA TCGA-BH-A18T-01A 2 1 5'UTR-5'UTR Intra-chr q33.1 Oncogene Tumor suppressor gene q33.1 Seq+ 20804 ChimerSeq STARFusion TCGA_RNA-Seq PTPN6-CD9 PTPN6 chr12 7055902 + CD9 chr12 6334592 + Exonic hg19 BRCA TCGA-BH-A18T-01A 2 1 Out-of-frame Intra-chr p13.31 Tumor suppressor gene p13.31 20805 ChimerSeq STARFusion TCGA_RNA-Seq ATL2-HNRPLL ATL2 chr2 38570410 - HNRPLL chr2 38818790 - Exonic hg19 BRCA TCGA-BH-A18T-01A 2 0 In-Frame Intra-chr p22.1 Seq+ 20806 ChimerSeq STARFusion TCGA_RNA-Seq TMEM241-TEX101 TMEM241 chr18 20936558 - TEX101 chr19 43906918 + Exonic hg19 BRCA TCGA-BH-A18T-01A 2 0 CDS-5'UTR Inter-chr q11.2 q13.31 20807 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSD1 PRSS27 chr16 2763530 - TPSD1 chr16 1308333 + Exonic hg19 BRCA TCGA-E2-A15K-06A 9 3 In-Frame Intra-chr p13.3 p13.3 20808 ChimerSeq STARFusion TCGA_RNA-Seq FDFT1-INTS9 FDFT1 chr8 11660440 + INTS9 chr8 28707790 - Exonic hg19 BRCA TCGA-E2-A15K-06A 3 12 Out-of-frame Intra-chr p23.1 p21.1 Seq+ 20809 ChimerSeq STARFusion TCGA_RNA-Seq PHB-LSM1 PHB chr17 47490539 - LSM1 chr8 38029551 - Exonic hg19 BRCA TCGA-A2-A0CU-01A 143 165 In-Frame Inter-chr q21.33 Tumor suppressor gene p11.23 Seq+ 20810 ChimerSeq STARFusion TCGA_RNA-Seq UCK2-DHX9 UCK2 chr1 165875206 + DHX9 chr1 182850399 + Exonic hg19 BRCA TCGA-BH-A0BW-01A 2 11 Out-of-frame Intra-chr q24.1 q25.3 Seq+ 20811 ChimerSeq STARFusion TCGA_RNA-Seq GOLGA3-ZNF664 GOLGA3 chr12 133405389 - ZNF664 chr12 124458433 + Exonic hg19 BRCA TCGA-AO-A03N-01B 2 0 5'UTR-5'UTR Intra-chr q24.33 q24.31 Transcription factor 20812 ChimerSeq STARFusion TCGA_RNA-Seq CPT1A-ADAM2 CPT1A chr11 68540733 - ADAM2 chr8 39607263 - Exonic hg19 BRCA TCGA-E2-A15R-01A 23 106 In-Frame Inter-chr q13.3 Seq+ 20813 ChimerSeq STARFusion TCGA_RNA-Seq FAM86C2P-PC FAM86C2P chr11 67572689 - PC chr11 66719939 - Exonic hg19 BRCA TCGA-E2-A15R-01A 10 83 3'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 20814 ChimerSeq STARFusion TCGA_RNA-Seq FAM86A-PC FAM86A chr16 5147645 - PC chr11 66719939 - Exonic hg19 BRCA TCGA-E2-A15R-01A 3 8 CDS-5'UTR Inter-chr q13.2 20815 ChimerSeq STARFusion TCGA_RNA-Seq TOM1L2-PEMT TOM1L2 chr17 17769610 - PEMT chr17 17415968 - Exonic hg19 BRCA TCGA-BH-A1FU-01A 5 3 Out-of-frame Intra-chr p11.2 Tumor suppressor gene p11.2 Seq+ 20816 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0101-TRIP4 KIAA0101 chr15 64673157 - TRIP4 chr15 64698529 + Exonic hg19 BRCA TCGA-BH-A1FU-01A 2 8 In-Frame Intra-chr q22.31 Seq+ 20817 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D23-CMSS1 TBC1D23 chr3 100002655 + CMSS1 chr3 99890683 + Exonic hg19 BRCA TCGA-AO-A129-01A 56 191 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 20818 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC16-LOC100505540 ZDHHC16 chr10 99215540 + LOC100505540 chr10 98863077 + Exonic hg19 BRCA TCGA-AO-A129-01A 27 47 CDS-5'UTR Intra-chr q24.1 20819 ChimerSeq STARFusion TCGA_RNA-Seq SENP5-PIGZ SENP5 chr3 196613565 + PIGZ chr3 196678902 - Exonic hg19 BRCA TCGA-AO-A129-01A 18 77 CDS-5'UTR Intra-chr q29 q29 Seq+ 20820 ChimerSeq STARFusion TCGA_RNA-Seq YARS-S100PBP YARS chr1 33276192 - S100PBP chr1 33295565 + Exonic hg19 BRCA TCGA-AO-A129-01A 14 45 In-Frame Intra-chr p35.1 p35.1 Seq+ 20821 ChimerSeq STARFusion TCGA_RNA-Seq MAPK14-EFHA1 MAPK14 chr6 36044376 + EFHA1 chr13 22113827 - Exonic hg19 BRCA TCGA-AO-A129-01A 15 34 In-Frame Inter-chr p21.31 Seq+ 20822 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC16-LOC100505540 ZDHHC16 chr10 99215540 + LOC100505540 chr10 98863080 + Exonic hg19 BRCA TCGA-AO-A129-01A 3 47 CDS-5'UTR Intra-chr q24.1 20823 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-SDK2 SLC39A11 chr17 71027695 - SDK2 chr17 71364732 - Exonic hg19 BRCA TCGA-AO-A129-01A 11 14 In-Frame Intra-chr q25.1 q25.1 Seq+ 20824 ChimerSeq STARFusion TCGA_RNA-Seq ADRBK1-BAIAP2 ADRBK1 chr11 67051844 + BAIAP2 chr17 79058632 + Exonic hg19 BRCA TCGA-AO-A129-01A 9 12 In-Frame Inter-chr q25.3 Seq+ 20825 ChimerSeq STARFusion TCGA_RNA-Seq FAM114A1-IQCE FAM114A1 chr4 38937411 + IQCE chr7 2629541 + Exonic hg19 BRCA TCGA-AO-A129-01A 7 20 In-Frame Inter-chr p14 p22.3 Seq+ 20826 ChimerSeq STARFusion TCGA_RNA-Seq UBA52-KXD1 UBA52 chr19 18684558 + KXD1 chr19 18672846 + Exonic hg19 BRCA TCGA-AO-A129-01A 4 23 CDS-5'UTR Intra-chr p13.11 p13.11 Seq+ 20827 ChimerSeq STARFusion TCGA_RNA-Seq CLPTM1-APOC2 CLPTM1 chr19 45465332 + APOC2 chr19 45451723 + Exonic hg19 BRCA TCGA-AO-A129-01A 5 7 5'UTR-5'UTR Intra-chr q13.32 q13.32 20828 ChimerSeq STARFusion TCGA_RNA-Seq LPP-RTP1 LPP chr3 187943315 + RTP1 chr3 186915378 + Exonic hg19 BRCA TCGA-AO-A129-01A 3 15 5'UTR-CDS Intra-chr q27.3 Oncogene q27.3 Seq+ 20829 ChimerSeq STARFusion TCGA_RNA-Seq PLOD2-ABCG1 PLOD2 chr3 145824319 - ABCG1 chr21 43645781 + Exonic hg19 BRCA TCGA-AO-A129-01A 5 5 In-Frame Inter-chr q24 q22.3 Seq+ 20830 ChimerSeq STARFusion TCGA_RNA-Seq UBXN1-BSCL2 UBXN1 chr11 62444990 - BSCL2 chr11 62460269 - Exonic hg19 BRCA TCGA-AO-A129-01A 4 9 In-Frame Intra-chr q12.3 q12.3 Seq+ 20831 ChimerSeq STARFusion TCGA_RNA-Seq UBE2G2-RUNX1 UBE2G2 chr21 46221621 - RUNX1 chr21 36171759 - Exonic hg19 BRCA TCGA-AO-A129-01A 4 5 In-Frame Intra-chr q22.3 q22.12 Oncogene Tumor suppressor gene Transcription factor Seq+ 20832 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL5-GPR114 OSBPL5 chr11 3140777 - GPR114 chr16 57595968 + Exonic hg19 BRCA TCGA-AO-A129-01A 4 3 CDS-5'UTR Inter-chr p15.4 Seq+ 20833 ChimerSeq STARFusion TCGA_RNA-Seq SMC2-PGM5 SMC2 chr9 106892126 + PGM5 chr9 71114143 + Exonic hg19 BRCA TCGA-AO-A129-01A 2 10 In-Frame Intra-chr q31.1 q21.11 Seq+ 20834 ChimerSeq STARFusion TCGA_RNA-Seq PSKH1-NUTF2 PSKH1 chr16 67943609 + NUTF2 chr16 67899005 + Exonic hg19 BRCA TCGA-AO-A129-01A 2 7 CDS-5'UTR Intra-chr q22.1 CAMK:PSK q22.1 Seq+ 20835 ChimerSeq STARFusion TCGA_RNA-Seq SENP7-RFC4 SENP7 chr3 101046510 - RFC4 chr3 186515403 - Exonic hg19 BRCA TCGA-AO-A129-01A 2 5 In-Frame Intra-chr q12.3 q27.3 Seq+ 20836 ChimerSeq STARFusion TCGA_RNA-Seq STAG1-CCDC77 STAG1 chr3 136471037 - CCDC77 chr12 514677 + Exonic hg19 BRCA TCGA-AO-A129-01A 2 5 5'UTR-5'UTR Inter-chr q22.3 p13.33 Seq+ 20837 ChimerSeq STARFusion TCGA_RNA-Seq CD302-MARCH7 CD302 chr2 160634449 - 2019_ 3_ 7_ chr2 160621137 + Exonic hg19 BRCA TCGA-AO-A129-01A 2 1 Out-of-frame Intra-chr q24.2 q24.2 20838 ChimerSeq STARFusion TCGA_RNA-Seq MGEA5-ACOT11 MGEA5 chr10 103577581 - ACOT11 chr1 55050328 + Exonic hg19 BRCA TCGA-AO-A129-01A 2 1 Out-of-frame Inter-chr q24.32 p32.3 Seq+ 20839 ChimerSeq STARFusion TCGA_RNA-Seq YWHAG-ZNF577 YWHAG chr7 75988039 - ZNF577 chr19 52390165 - Exonic hg19 BRCA TCGA-AO-A129-01A 2 0 CDS-5'UTR Inter-chr q11.23 q13.41 Transcription factor 20840 ChimerSeq STARFusion TCGA_RNA-Seq GSE1-HSD17B2 GSE1 chr16 85667738 + HSD17B2 chr16 82101775 + Exonic hg19 BRCA TCGA-A2-A25A-01A 3 5 Out-of-frame Intra-chr q24.1 q23.3 Seq+ 20841 ChimerSeq STARFusion TCGA_RNA-Seq FARP1-PCNXL4 FARP1 chr13 98865667 + PCNXL4 chr14 60581418 + Exonic hg19 BRCA TCGA-A2-A25A-01A 2 0 Out-of-frame Inter-chr q32.2 20842 ChimerSeq STARFusion TCGA_RNA-Seq SNX14-EYS SNX14 chr6 86303297 - EYS chr6 66205886 - Exonic hg19 BRCA TCGA-D8-A73W-01A 3 16 CDS-5'UTR Intra-chr q14.3 q12 Seq+ 20843 ChimerSeq STARFusion TCGA_RNA-Seq PTRH2-VMP1 PTRH2 chr17 57784732 - VMP1 chr17 57784888 + Exonic hg19 BRCA TCGA-B6-A0IK-01A 37 24 5'UTR-5'UTR Intra-chr q23.1 q23.1 Seq+ 20844 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-DGAT2 UVRAG chr11 75526569 + DGAT2 chr11 75507373 + Exonic hg19 BRCA TCGA-B6-A0IK-01A 19 16 In-Frame Intra-chr q13.5 Tumor suppressor gene q13.5 Seq+ 20845 ChimerSeq STARFusion TCGA_RNA-Seq PTRH2-VMP1 PTRH2 chr17 57784741 - VMP1 chr17 57784888 + Exonic hg19 BRCA TCGA-B6-A0IK-01A 8 24 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 20846 ChimerSeq STARFusion TCGA_RNA-Seq USP32-BCAS3 USP32 chr17 58422842 - BCAS3 chr17 58885365 + Exonic hg19 BRCA TCGA-B6-A0IK-01A 2 6 Out-of-frame Intra-chr q23.2 q23.2 20847 ChimerSeq STARFusion TCGA_RNA-Seq ZNF280D-FURIN ZNF280D chr15 57025656 - FURIN chr15 91418812 + Exonic hg19 BRCA TCGA-B6-A0IK-01A 2 0 5'UTR-5'UTR Intra-chr q21.3 Transcription factor q26.1 20848 ChimerSeq STARFusion TCGA_RNA-Seq SEC31A-MUC7 SEC31A chr4 83778105 - MUC7 chr4 71337932 + Exonic hg19 BRCA TCGA-A8-A09A-01A 37 94 CDS-5'UTR Intra-chr q21.22 q13.3 Seq+ 20849 ChimerSeq STARFusion TCGA_RNA-Seq VMP1-PSMA6 VMP1 chr17 57851246 + PSMA6 chr14 35786455 + Exonic hg19 BRCA TCGA-A8-A09A-01A 6 42 Out-of-frame Inter-chr q23.1 q13.2 Seq+ 20850 ChimerSeq STARFusion TCGA_RNA-Seq SLC16A5-ICT1 SLC16A5 chr17 73096911 + ICT1 chr17 73015795 + Exonic hg19 BRCA TCGA-A8-A09A-01A 3 19 In-Frame Intra-chr q25.1 Seq+ 20851 ChimerSeq STARFusion TCGA_RNA-Seq INTS8-DPY19L4 INTS8 chr8 95835789 + DPY19L4 chr8 95778840 + Exonic hg19 BRCA TCGA-A8-A09A-01A 4 9 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 20852 ChimerSeq STARFusion TCGA_RNA-Seq RNF4-LOC402160 RNF4 chr4 2470985 + LOC402160 chr4 2438601 + Exonic hg19 BRCA TCGA-A8-A09A-01A 2 15 5'UTR-CDS Intra-chr p16.3 20853 ChimerSeq STARFusion TCGA_RNA-Seq AHNAK-INTS5 AHNAK chr11 62259204 - INTS5 chr11 62417471 - Exonic hg19 BRCA TCGA-A8-A09A-01A 3 6 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q12.3 Seq+ 20854 ChimerSeq STARFusion TCGA_RNA-Seq HECTD2-PCGF5 HECTD2 chr10 93185167 + PCGF5 chr10 93031395 + Exonic hg19 BRCA TCGA-A8-A09A-01A 2 9 Out-of-frame Intra-chr q23.32 q23.32 Seq+ 20855 ChimerSeq STARFusion TCGA_RNA-Seq YWHAB-STK4 YWHAB chr20 43514527 + STK4 chr20 43615773 + Exonic hg19 BRCA TCGA-A8-A09A-01A 2 3 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 20856 ChimerSeq STARFusion TCGA_RNA-Seq ZNF208-ST3GAL4 ZNF208 chr19 22193594 - ST3GAL4 chr11 126279163 + Exonic hg19 BRCA TCGA-A8-A09A-01A 2 3 In-Frame Inter-chr p12 Transcription factor q24.2 Seq+ 20857 ChimerSeq STARFusion TCGA_RNA-Seq NPC1-ANKRD29 NPC1 chr18 21124308 - ANKRD29 chr18 21214113 - Exonic hg19 BRCA TCGA-A8-A09A-01A 2 0 In-Frame Intra-chr q11.2 q11.2 Seq+ 20858 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-ACER3 TAOK1 chr17 27825539 + ACER3 chr11 76687333 + Exonic hg19 BRCA TCGA-A1-A0SM-01A 19 22 In-Frame Inter-chr q11.2 q13.5 Seq+ 20859 ChimerSeq STARFusion TCGA_RNA-Seq SOCS7-FLOT2 SOCS7 chr17 36533668 + FLOT2 chr17 27216044 - Exonic hg19 BRCA TCGA-A1-A0SM-01A 6 39 In-Frame Intra-chr q12 q11.2 Seq+ 20860 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-UVRAG STARD3 chr17 37810003 + UVRAG chr11 75599873 + Exonic hg19 BRCA TCGA-A1-A0SM-01A 4 41 In-Frame Inter-chr q12 q13.5 Tumor suppressor gene Seq+ 20861 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-GDPD5 FBXL20 chr17 37457254 - GDPD5 chr11 75167861 - Exonic hg19 BRCA TCGA-A1-A0SM-01A 7 27 In-Frame Inter-chr q12 q13.5 Seq+ 20862 ChimerSeq STARFusion TCGA_RNA-Seq DDX52-PSMD3 DDX52 chr17 35980918 - PSMD3 chr17 38145992 + Exonic hg19 BRCA TCGA-A1-A0SM-01A 7 25 In-Frame Intra-chr q12 q21.1 Seq+ 20863 ChimerSeq STARFusion TCGA_RNA-Seq RARA-NARS2 RARA chr17 38487648 + NARS2 chr11 78282489 - Exonic hg19 BRCA TCGA-A1-A0SM-01A 2 42 Out-of-frame Inter-chr q21.2 Oncogene Transcription factor q14.1 Seq+ 20864 ChimerSeq STARFusion TCGA_RNA-Seq ARRB1-UVRAG ARRB1 chr11 75062632 - UVRAG chr11 75715049 + Exonic hg19 BRCA TCGA-A1-A0SM-01A 4 31 Out-of-frame Intra-chr q13.4 q13.5 Tumor suppressor gene Seq+ 20865 ChimerSeq STARFusion TCGA_RNA-Seq ACER3-THRSP ACER3 chr11 76572123 + THRSP chr11 77778705 + Exonic hg19 BRCA TCGA-A1-A0SM-01A 5 18 CDS-3'UTR Intra-chr q13.5 q14.1 Seq+ 20866 ChimerSeq STARFusion TCGA_RNA-Seq LOC440434-RSF1 LOC440434 chr17 36398218 - RSF1 chr11 77378536 - Exonic hg19 BRCA TCGA-A1-A0SM-01A 4 18 3'UTR-CDS Inter-chr q14.1 20867 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-LRTOMT UVRAG chr11 75623083 + LRTOMT chr11 71799343 + Exonic hg19 BRCA TCGA-A1-A0SM-01A 4 10 CDS-5'UTR Intra-chr q13.5 Tumor suppressor gene q13.4 Seq+ 20868 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-LRTOMT UVRAG chr11 75623083 + LRTOMT chr11 71804542 + Exonic hg19 BRCA TCGA-A1-A0SM-01A 3 10 Out-of-frame Intra-chr q13.5 Tumor suppressor gene q13.4 Seq+ 20869 ChimerSeq STARFusion TCGA_RNA-Seq DDX52-MRPL48 DDX52 chr17 35990060 - MRPL48 chr11 73555852 + Exonic hg19 BRCA TCGA-A1-A0SM-01A 3 4 In-Frame Inter-chr q12 q13.4 20870 ChimerSeq STARFusion TCGA_RNA-Seq RSF1-PHF12 RSF1 chr11 77531574 - PHF12 chr17 27254081 - Exonic hg19 BRCA TCGA-A1-A0SM-01A 2 6 Out-of-frame Inter-chr q14.1 q11.2 Seq+ 20871 ChimerSeq STARFusion TCGA_RNA-Seq GNA13-PLEKHM1P GNA13 chr17 63049620 - PLEKHM1P chr17 62825367 - Exonic hg19 BRCA TCGA-A1-A0SM-01A 2 5 CDS-3'UTR Intra-chr q24.1 20872 ChimerSeq STARFusion TCGA_RNA-Seq DDX52-MRPL48 DDX52 chr17 35990060 - MRPL48 chr11 73536753 + Exonic hg19 BRCA TCGA-A1-A0SM-01A 2 4 Out-of-frame Inter-chr q12 q13.4 20873 ChimerSeq STARFusion TCGA_RNA-Seq DDX52-MRPL48 DDX52 chr17 35992143 - MRPL48 chr11 73536753 + Exonic hg19 BRCA TCGA-A1-A0SM-01A 2 4 Out-of-frame Inter-chr q12 q13.4 20874 ChimerSeq STARFusion TCGA_RNA-Seq ANXA5-COL1A2 ANXA5 chr4 122593688 - COL1A2 chr7 94044538 + Exonic hg19 BRCA TCGA-A1-A0SM-01A 2 2 5'UTR-CDS Inter-chr q27 q21.3 20875 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-CCDC170 ESR1 chr6 152332929 + CCDC170 chr6 151869439 + Exonic hg19 BRCA TCGA-A1-A0SM-01A 2 2 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 KB Pub Seq+ 20876 ChimerSeq STARFusion TCGA_RNA-Seq TDRD3-LHFP TDRD3 chr13 60971539 + LHFP chr13 39952663 - Exonic hg19 BRCA TCGA-LL-A73Y-01A 2 7 Out-of-frame Intra-chr q21.2 q14.11 Seq+ 20877 ChimerSeq STARFusion TCGA_RNA-Seq RNF121-SF1 RNF121 chr11 71640170 + SF1 chr11 64544098 - Exonic hg19 BRCA TCGA-E2-A576-01A 5 11 Out-of-frame Intra-chr q13.4 q13.1 Seq+ 20878 ChimerSeq STARFusion TCGA_RNA-Seq NRBF2-CYP26A1 NRBF2 chr10 64893260 + CYP26A1 chr10 94835583 + Exonic hg19 BRCA TCGA-E2-A576-01A 2 22 In-Frame Intra-chr q21.3 q23.33 Seq+ 20879 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-FOXRED2 MYH9 chr22 36783852 - FOXRED2 chr22 36886314 - Exonic hg19 BRCA TCGA-A7-A4SE-01A 118 223 5'UTR-CDS Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Seq+ 20880 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-TXN2 MYH9 chr22 36783852 - TXN2 chr22 36876884 - Exonic hg19 BRCA TCGA-A7-A4SE-01A 18 353 5'UTR-5'UTR Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Seq+ 20881 ChimerSeq STARFusion TCGA_RNA-Seq ARMC1-PEX19 ARMC1 chr8 66525479 - PEX19 chr1 160249635 - Exonic hg19 BRCA TCGA-A7-A4SE-01A 12 51 In-Frame Inter-chr q13.1 q23.2 Seq+ 20882 ChimerSeq STARFusion TCGA_RNA-Seq PKMYT1-CLDN6 PKMYT1 chr16 3029649 - CLDN6 chr16 3066043 - Exonic hg19 BRCA TCGA-A7-A4SE-01A 6 28 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 20883 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57733388 + VMP1 chr17 57886157 + Exonic hg19 BRCA TCGA-A7-A4SE-01A 7 20 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 20884 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC8-SS18 TRAPPC8 chr18 29487423 - SS18 chr18 23637706 - Exonic hg19 BRCA TCGA-A7-A4SE-01A 4 28 In-Frame Intra-chr q12.1 q11.2 Seq+ 20885 ChimerSeq STARFusion TCGA_RNA-Seq TNFRSF12A-LINC00514 TNFRSF12A chr16 3070492 + LINC00514 chr16 3040088 + Exonic hg19 BRCA TCGA-A7-A4SE-01A 3 31 CDS-5'UTR Intra-chr p13.3 Tumor suppressor gene p13.3 20886 ChimerSeq STARFusion TCGA_RNA-Seq ILF3-DNM2 ILF3 chr19 10765163 + DNM2 chr19 10870414 + Exonic hg19 BRCA TCGA-A7-A4SE-01A 2 2 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 20887 ChimerSeq STARFusion TCGA_RNA-Seq ECE1-GTF2I ECE1 chr1 21546452 - GTF2I chr7 74172292 + Exonic hg19 BRCA TCGA-A8-A083-01A 15 23 Out-of-frame Inter-chr p36.12 q11.23 Transcription factor 20888 ChimerSeq STARFusion TCGA_RNA-Seq TRIM74-SUN2 TRIM74 chr7 72430417 - SUN2 chr22 39137576 - Exonic hg19 BRCA TCGA-A8-A083-01A 9 35 5'UTR-CDS Inter-chr q11.23 q13.1 20889 ChimerSeq STARFusion TCGA_RNA-Seq TRIM74-SUN2 TRIM74 chr7 72430266 - SUN2 chr22 39137572 - Exonic hg19 BRCA TCGA-A8-A083-01A 3 35 Out-of-frame Inter-chr q11.23 q13.1 20890 ChimerSeq STARFusion TCGA_RNA-Seq ANO1-LOC100131347 ANO1 chr11 69924820 + LOC100131347 chr17 37228720 + Exonic hg19 BRCA TCGA-AC-A3QQ-01A 22 72 CDS-5'UTR Inter-chr q13.3 20891 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-RPPH1 RNA45S5 chrUn_gl000220 118516 + RPPH1 chr14 20811450 - Exonic hg19 BRCA TCGA-AC-A3QQ-01A 6 82 Out-of-frame Inter-chr q11.2 20892 ChimerSeq STARFusion TCGA_RNA-Seq DSCR3-TTC3 DSCR3 chr21 38639539 - TTC3 chr21 38480692 + Exonic hg19 BRCA TCGA-AC-A3QQ-01A 19 21 Out-of-frame Intra-chr q22.13 q22.13 Seq+ 20893 ChimerSeq STARFusion TCGA_RNA-Seq ANO1-LOC100131347 ANO1 chr11 69924820 + LOC100131347 chr17 37225379 + Exonic hg19 BRCA TCGA-AC-A3QQ-01A 4 72 CDS-5'UTR Inter-chr q13.3 20894 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-RMRP RNA45S5 chrUn_gl000220 118502 + RMRP chr9 35657960 - Exonic hg19 BRCA TCGA-AC-A3QQ-01A 4 38 Out-of-frame Inter-chr p13.3 20895 ChimerSeq STARFusion TCGA_RNA-Seq SNORA81-MIR1248 SNORA81 chr3 186504640 + MIR1248 chr3 186504463 + Exonic hg19 BRCA TCGA-AC-A3QQ-01A 11 0 Out-of-frame Intra-chr q11.2 q27.3 20896 ChimerSeq STARFusion TCGA_RNA-Seq SNORA50-CNOT1 SNORA50 chr16 58593708 - CNOT1 chr16 58594266 - Exonic hg19 BRCA TCGA-AC-A3QQ-01A 4 13 3'UTR-CDS Intra-chr q23.3 q21 20897 ChimerSeq STARFusion TCGA_RNA-Seq LOC100131347-RARA LOC100131347 chr17 37213412 + RARA chr17 38487109 + Exonic hg19 BRCA TCGA-AC-A3QQ-01A 5 7 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor 20898 ChimerSeq STARFusion TCGA_RNA-Seq ACBD6-PGBD2 ACBD6 chr1 180366651 - PGBD2 chr1 249208015 + Exonic hg19 BRCA TCGA-AC-A3QQ-01A 3 13 CDS-5'UTR Intra-chr q25.3 q44 Seq+ 20899 ChimerSeq STARFusion TCGA_RNA-Seq TNFAIP1-AATF TNFAIP1 chr17 26662882 + AATF chr17 35343916 + Exonic hg19 BRCA TCGA-AC-A3QQ-01A 2 9 5'UTR-CDS Intra-chr q11.2 Seq+ 20900 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-SCGB2A2 RNA45S5 chrUn_gl000220 116083 + SCGB2A2 chr11 62038364 + Exonic hg19 BRCA TCGA-AC-A3QQ-01A 3 4 Out-of-frame Inter-chr q12.3 20901 ChimerSeq STARFusion TCGA_RNA-Seq STARD10-LRRC37A11P STARD10 chr11 72466746 - LRRC37A11P chr17 37190423 + Exonic hg19 BRCA TCGA-AC-A3QQ-01A 4 0 CDS-5'UTR Inter-chr q13.4 q12 20902 ChimerSeq STARFusion TCGA_RNA-Seq POLN-HAUS3 POLN chr4 2172406 - HAUS3 chr4 2230970 - Exonic hg19 BRCA TCGA-AC-A3QQ-01A 3 2 CDS-3'UTR Intra-chr p16.3 p16.3 20903 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-KRT10 TANC2 chr17 61345234 + KRT10 chr17 38974734 - Exonic hg19 BRCA TCGA-AC-A3QQ-01A 2 5 Out-of-frame Intra-chr q23.2 q21.2 Seq+ 20904 ChimerSeq STARFusion TCGA_RNA-Seq BAGE2-MLL3 BAGE2 chr21 11029598 - MLL3 chr7 151948051 - Exonic hg19 BRCA TCGA-AC-A3QQ-01A 2 2 3'UTR-CDS Inter-chr p11.2 Tumor suppressor gene 20905 ChimerSeq STARFusion TCGA_RNA-Seq BAGE3-MLL3 BAGE3 chr21 11029598 - MLL3 chr7 151948051 - Exonic hg19 BRCA TCGA-AC-A3QQ-01A 2 2 3'UTR-CDS Inter-chr Tumor suppressor gene 20906 ChimerSeq STARFusion TCGA_RNA-Seq DDX52-RNF121 DDX52 chr17 36002139 - RNF121 chr11 71671796 + Exonic hg19 BRCA TCGA-AC-A3QQ-01A 2 2 Out-of-frame Inter-chr q12 q13.4 20907 ChimerSeq STARFusion TCGA_RNA-Seq FAM168A-SLC13A2 FAM168A chr11 73308968 - SLC13A2 chr17 26816232 + Exonic hg19 BRCA TCGA-AC-A3QQ-01A 2 2 5'UTR-5'UTR Inter-chr q13.4 q11.2 Seq+ 20908 ChimerSeq STARFusion TCGA_RNA-Seq POLN-HAUS3 POLN chr4 2172406 - HAUS3 chr4 2238183 - Exonic hg19 BRCA TCGA-AC-A3QQ-01A 2 2 Out-of-frame Intra-chr p16.3 p16.3 20909 ChimerSeq STARFusion TCGA_RNA-Seq OPRD1-EPB41 OPRD1 chr1 29185815 + EPB41 chr1 29313960 + Exonic hg19 BRCA TCGA-AC-A3QQ-01A 2 0 CDS-5'UTR Intra-chr p35.3 p35.3 Tumor suppressor gene 20910 ChimerSeq STARFusion TCGA_RNA-Seq ZNF460-ELSPBP1 ZNF460 chr19 57796045 + ELSPBP1 chr19 48517428 + Exonic hg19 BRCA TCGA-A2-A0EV-01A 32 238 In-Frame Intra-chr q13.43 Transcription factor q13.33 Seq+ 20911 ChimerSeq STARFusion TCGA_RNA-Seq ZNF460-ELSPBP1 ZNF460 chr19 57796045 + ELSPBP1 chr19 48525427 + Exonic hg19 BRCA TCGA-A2-A0EV-01A 25 234 In-Frame Intra-chr q13.43 Transcription factor q13.33 Seq+ 20912 ChimerSeq STARFusion TCGA_RNA-Seq ZNF460-ELSPBP1 ZNF460 chr19 57796045 + ELSPBP1 chr19 48519150 + Exonic hg19 BRCA TCGA-A2-A0EV-01A 15 234 In-Frame Intra-chr q13.43 Transcription factor q13.33 Seq+ 20913 ChimerSeq STARFusion TCGA_RNA-Seq ZNF460-ELSPBP1 ZNF460 chr19 57796045 + ELSPBP1 chr19 48522976 + Exonic hg19 BRCA TCGA-A2-A0EV-01A 7 234 In-Frame Intra-chr q13.43 Transcription factor q13.33 Seq+ 20914 ChimerSeq STARFusion TCGA_RNA-Seq ZNF83-PCDH15 ZNF83 chr19 53138319 - PCDH15 chr10 56424050 - Exonic hg19 BRCA TCGA-A2-A0EV-01A 17 43 5'UTR-5'UTR Inter-chr q13.41 Transcription factor q21.1 Seq+ 20915 ChimerSeq STARFusion TCGA_RNA-Seq SCAF1-MAP4K1 SCAF1 chr19 50161146 + MAP4K1 chr19 39078457 - Exonic hg19 BRCA TCGA-A2-A0EV-01A 9 51 Out-of-frame Intra-chr q13.33 Tumor suppressor gene Seq+ 20916 ChimerSeq STARFusion TCGA_RNA-Seq KIF18B-NPY1R KIF18B chr17 43003163 - NPY1R chr4 164245900 - Exonic hg19 BRCA TCGA-A2-A0EV-01A 21 0 Out-of-frame Inter-chr q21.31 q32.2 20917 ChimerSeq STARFusion TCGA_RNA-Seq SETD2-SH3BP5 SETD2 chr3 47205344 - SH3BP5 chr3 15311384 - Exonic hg19 BRCA TCGA-Z7-A8R5-01A 2 1 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene p25.1 20918 ChimerSeq STARFusion TCGA_RNA-Seq P4HTM-MEIOB P4HTM chr3 49028347 + MEIOB chr16 1884367 - Exonic hg19 BRCA TCGA-AC-A3TM-01A 3 13 Out-of-frame Inter-chr p21.31 Seq+ 20919 ChimerSeq STARFusion TCGA_RNA-Seq SEC61B-SIT1 SEC61B chr9 101984925 + SIT1 chr9 35650944 - Exonic hg19 BRCA TCGA-D8-A1J9-01A 32 188 CDS-5'UTR Intra-chr q22.33 p13.3 Seq+ 20920 ChimerSeq STARFusion TCGA_RNA-Seq TADA2A-MYO1D TADA2A chr17 35802753 + MYO1D chr17 30821933 - Exonic hg19 BRCA TCGA-D8-A1J9-01A 4 30 Out-of-frame Intra-chr q12 q11.2 Seq+ 20921 ChimerSeq STARFusion TCGA_RNA-Seq TADA2A-MYO1D TADA2A chr17 35804870 + MYO1D chr17 30821933 - Exonic hg19 BRCA TCGA-D8-A1J9-01A 2 30 Out-of-frame Intra-chr q12 q11.2 Seq+ 20922 ChimerSeq STARFusion TCGA_RNA-Seq MYO19-CNP MYO19 chr17 34888357 - CNP chr17 40128611 + Exonic hg19 BRCA TCGA-D8-A1J9-01A 6 10 CDS-3'UTR Intra-chr q12 q21.2 Seq+ 20923 ChimerSeq STARFusion TCGA_RNA-Seq ABL1-ADAMTSL2 ABL1 chr9 133589842 + ADAMTSL2 chr9 136401685 + Exonic hg19 BRCA TCGA-D8-A1J9-01A 2 21 CDS-5'UTR Intra-chr q34.12 TK:Abl Oncogene q34.2 Seq+ 20924 ChimerSeq STARFusion TCGA_RNA-Seq MYO1D-ACACA MYO1D chr17 31075954 - ACACA chr17 35482715 - Exonic hg19 BRCA TCGA-D8-A1J9-01A 3 14 Out-of-frame Intra-chr q11.2 Seq+ 20925 ChimerSeq STARFusion TCGA_RNA-Seq CCT6P3-LOC100507412 CCT6P3 chr7 64498943 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-D8-A1J9-01A 4 5 5'UTR-5'UTR Inter-chr q11.21 20926 ChimerSeq STARFusion TCGA_RNA-Seq C9orf3-UBAP2 C9orf3 chr9 97555200 + UBAP2 chr9 33960876 - Exonic hg19 BRCA TCGA-D8-A1J9-01A 2 5 Out-of-frame Intra-chr q22.32 p13.3 Seq+ 20927 ChimerSeq STARFusion TCGA_RNA-Seq MGP-CPB1 MGP chr12 15035906 - CPB1 chr3 148562265 + Exonic hg19 BRCA TCGA-D8-A1J9-01A 2 5 Out-of-frame Inter-chr p12.3 q24 20928 ChimerSeq STARFusion TCGA_RNA-Seq TOMM20-LOC493754 TOMM20 chr1 235291912 - LOC493754 chr7 66019142 - Exonic hg19 BRCA TCGA-D8-A1J9-01A 3 0 Out-of-frame Inter-chr q42.3 20929 ChimerSeq STARFusion TCGA_RNA-Seq TNC-GABBR2 TNC chr9 117835882 - GABBR2 chr9 101340354 - Exonic hg19 BRCA TCGA-D8-A1J9-01A 2 3 Out-of-frame Intra-chr q33.1 q22.33 Seq+ 20930 ChimerSeq STARFusion TCGA_RNA-Seq TNC-GABBR2 TNC chr9 117819432 - GABBR2 chr9 101340354 - Exonic hg19 BRCA TCGA-D8-A1J9-01A 2 3 Out-of-frame Intra-chr q33.1 q22.33 Seq+ 20931 ChimerSeq STARFusion TCGA_RNA-Seq MMP17-NOC4L MMP17 chr12 132313198 + NOC4L chr12 132635526 + Exonic hg19 BRCA TCGA-D8-A1J9-01A 2 0 Out-of-frame Intra-chr q24.33 q24.33 Seq+ 20932 ChimerSeq STARFusion TCGA_RNA-Seq TASP1-DSTN TASP1 chr20 13398095 - DSTN chr20 17581383 + Exonic hg19 BRCA TCGA-D8-A1J9-01A 2 0 In-Frame Intra-chr p12.1 p12.1 20933 ChimerSeq STARFusion TCGA_RNA-Seq APP-RCAN1 APP chr21 27484296 - RCAN1 chr21 35896008 - Exonic hg19 BRCA TCGA-A8-A08P-01A 17 63 In-Frame Intra-chr q21.3 q22.12 Seq+ 20934 ChimerSeq STARFusion TCGA_RNA-Seq PCCB-DLG1 PCCB chr3 136048826 + DLG1 chr3 196921460 - Exonic hg19 BRCA TCGA-A8-A08P-01A 5 27 Out-of-frame Intra-chr q22.3 q29 Tumor suppressor gene Seq+ 20935 ChimerSeq STARFusion TCGA_RNA-Seq SETD1B-TMEM120B SETD1B chr12 122257396 + TMEM120B chr12 122214275 + Exonic hg19 BRCA TCGA-A8-A08P-01A 6 15 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 20936 ChimerSeq STARFusion TCGA_RNA-Seq PCCB-DLG1 PCCB chr3 136047699 + DLG1 chr3 196921460 - Exonic hg19 BRCA TCGA-A8-A08P-01A 2 27 Out-of-frame Intra-chr q22.3 q29 Tumor suppressor gene Seq+ 20937 ChimerSeq STARFusion TCGA_RNA-Seq MSL2-PPP2R3A MSL2 chr3 135913814 - PPP2R3A chr3 135863885 + Exonic hg19 BRCA TCGA-A8-A08P-01A 6 6 Out-of-frame Intra-chr q22.3 q22.2 Seq+ 20938 ChimerSeq STARFusion TCGA_RNA-Seq SLC20A2-HIP1 SLC20A2 chr8 42286276 - HIP1 chr7 75172293 - Exonic hg19 BRCA TCGA-A8-A08P-01A 3 14 In-Frame Inter-chr p11.21 q11.23 Seq+ 20939 ChimerSeq STARFusion TCGA_RNA-Seq PRRG2-FCGRT PRRG2 chr19 50087209 + FCGRT chr19 50027764 + Exonic hg19 BRCA TCGA-A8-A08P-01A 4 7 In-Frame Intra-chr q13.33 q13.33 Seq+ 20940 ChimerSeq STARFusion TCGA_RNA-Seq GMPR-NDUFAF6 GMPR chr6 16254966 + NDUFAF6 chr8 96044223 + Exonic hg19 BRCA TCGA-A8-A08P-01A 2 8 Out-of-frame Inter-chr p22.3 q22.1 Seq+ 20941 ChimerSeq STARFusion TCGA_RNA-Seq BRWD1-LCA5L BRWD1 chr21 40585407 - LCA5L chr21 40801137 - Exonic hg19 BRCA TCGA-A8-A08P-01A 2 7 CDS-5'UTR Intra-chr q22.2 q22.2 Seq+ 20942 ChimerSeq STARFusion TCGA_RNA-Seq UBC-HSP90AB1 UBC chr12 125397543 - HSP90AB1 chr6 44219293 + Exonic hg19 BRCA TCGA-A8-A08P-01A 3 0 Out-of-frame Inter-chr q24.31 p21.1 Oncogene 20943 ChimerSeq STARFusion TCGA_RNA-Seq ATF1-PCED1B ATF1 chr12 51158090 + PCED1B chr12 47628790 + Exonic hg19 BRCA TCGA-A8-A08P-01A 2 0 Out-of-frame Intra-chr q13.12 Oncogene Transcription factor q13.11 20944 ChimerSeq STARFusion TCGA_RNA-Seq COPE-RASSF4 COPE chr19 19016385 - RASSF4 chr10 45465613 + Exonic hg19 BRCA TCGA-A8-A08P-01A 2 0 CDS-5'UTR Inter-chr p13.11 q11.21 Tumor suppressor gene 20945 ChimerSeq STARFusion TCGA_RNA-Seq SMG7-OLFM3 SMG7 chr1 183441784 + OLFM3 chr1 102302581 - Exonic hg19 BRCA TCGA-A8-A08P-01A 2 0 Out-of-frame Intra-chr q25.3 p21.1 20946 ChimerSeq STARFusion TCGA_RNA-Seq TGFBR2-ADAM10 TGFBR2 chr3 30648469 + ADAM10 chr15 58891923 - Exonic hg19 BRCA TCGA-A8-A08P-01A 2 0 CDS-3'UTR Inter-chr p24.1 Oncogene Tumor suppressor gene q21.3 20947 ChimerSeq STARFusion TCGA_RNA-Seq NCOA4-OR13A1 NCOA4 chr10 51565296 + OR13A1 chr10 45803256 - Exonic hg19 BRCA TCGA-B6-A0X7-01A 5 14 5'UTR-5'UTR Intra-chr q11.22 Oncogene Tumor suppressor gene Seq+ 20948 ChimerSeq STARFusion TCGA_RNA-Seq ALX4-STK33 ALX4 chr11 44289044 - STK33 chr11 8414257 - Exonic hg19 BRCA TCGA-B6-A0X7-01A 4 7 In-Frame Intra-chr p11.2 Transcription factor p15.4 CAMK:CAMK-Unique Seq+ 20949 ChimerSeq STARFusion TCGA_RNA-Seq NDUFB9-TDRKH NDUFB9 chr8 125551528 + TDRKH chr1 151755525 - Exonic hg19 BRCA TCGA-AC-A6IX-01A 113 354 CDS-5'UTR Inter-chr q24.13 q21.3 Seq+ 20950 ChimerSeq STARFusion TCGA_RNA-Seq LRP12-LAPTM4B LRP12 chr8 105601047 - LAPTM4B chr8 98863625 + Exonic hg19 BRCA TCGA-AC-A6IX-01A 17 52 Out-of-frame Intra-chr q22.3 q22.1 Seq+ 20951 ChimerSeq STARFusion TCGA_RNA-Seq LMBR1-LINC01006 LMBR1 chr7 156589083 - LINC01006 chr7 156398458 - Exonic hg19 BRCA TCGA-AC-A6IX-01A 4 35 Out-of-frame Intra-chr q36.3 q36.3 20952 ChimerSeq STARFusion TCGA_RNA-Seq LMBR1-LINC01006 LMBR1 chr7 156589083 - LINC01006 chr7 156265405 - Exonic hg19 BRCA TCGA-AC-A6IX-01A 2 32 Out-of-frame Intra-chr q36.3 q36.3 20953 ChimerSeq STARFusion TCGA_RNA-Seq TOP3A-TEKT1 TOP3A chr17 18217913 - TEKT1 chr17 6719281 - Exonic hg19 BRCA TCGA-AC-A6IX-01A 3 15 Out-of-frame Intra-chr p13.1 Seq+ 20954 ChimerSeq STARFusion TCGA_RNA-Seq ZHX2-COL14A1 ZHX2 chr8 123794185 + COL14A1 chr8 121180400 + Exonic hg19 BRCA TCGA-AC-A6IX-01A 2 6 5'UTR-CDS Intra-chr q24.13 Tumor suppressor gene Transcription factor q24.12 Seq+ 20955 ChimerSeq STARFusion TCGA_RNA-Seq ACACA-LOC100507412 ACACA chr17 35715942 - LOC100507412 chrUn_gl000220 122991 + Exonic hg19 BRCA TCGA-B6-A1KF-01A 34 91 5'UTR-5'UTR Inter-chr 20956 ChimerSeq STARFusion TCGA_RNA-Seq PIK3R1-NDUFB7 PIK3R1 chr5 67576834 + NDUFB7 chr19 14677745 - Exonic hg19 BRCA TCGA-B6-A1KF-01A 36 63 In-Frame Inter-chr q13.1 Oncogene p13.12 Seq+ 20957 ChimerSeq STARFusion TCGA_RNA-Seq DOT1L-TLE6 DOT1L chr19 2180755 + TLE6 chr19 2978196 + Exonic hg19 BRCA TCGA-B6-A1KF-01A 3 38 CDS-5'UTR Intra-chr p13.3 Oncogene Transcription factor p13.3 Seq+ 20958 ChimerSeq STARFusion TCGA_RNA-Seq DOT1L-TLE6 DOT1L chr19 2180755 + TLE6 chr19 2980098 + Exonic hg19 BRCA TCGA-B6-A1KF-01A 3 38 Out-of-frame Intra-chr p13.3 Oncogene Transcription factor p13.3 Seq+ 20959 ChimerSeq STARFusion TCGA_RNA-Seq CACNA1G-MED24 CACNA1G chr17 48655925 + MED24 chr17 38182584 - Exonic hg19 BRCA TCGA-AR-A24U-01A 4 18 In-Frame Intra-chr q21.33 q21.1 Seq+ 20960 ChimerSeq STARFusion TCGA_RNA-Seq SKAP1-IKZF3 SKAP1 chr17 46423267 - IKZF3 chr17 37922746 - Exonic hg19 BRCA TCGA-AR-A24U-01A 2 26 In-Frame Intra-chr q21.32 q21.1 Tumor suppressor gene Transcription factor Seq+ 20961 ChimerSeq STARFusion TCGA_RNA-Seq LAP3-LOC283788 LAP3 chr4 17600181 + LOC283788 chrUn_gl000219 58989 - Exonic hg19 BRCA TCGA-AR-A24U-01A 5 12 CDS-3'UTR Inter-chr p15.32 20962 ChimerSeq STARFusion TCGA_RNA-Seq CACNA1G-MED24 CACNA1G chr17 48655925 + MED24 chr17 38179648 - Exonic hg19 BRCA TCGA-AR-A24U-01A 2 18 Out-of-frame Intra-chr q21.33 q21.1 Seq+ 20963 ChimerSeq STARFusion TCGA_RNA-Seq ERAP2-FAM81B ERAP2 chr5 96212231 + FAM81B chr5 94772504 + Exonic hg19 BRCA TCGA-AR-A24U-01A 4 2 5'UTR-CDS Intra-chr q15 q15 Seq+ 20964 ChimerSeq STARFusion TCGA_RNA-Seq CAST-MCTP1 CAST chr5 96073651 + MCTP1 chr5 94050591 - Exonic hg19 BRCA TCGA-AR-A24U-01A 2 8 In-Frame Intra-chr q15 q15 Seq+ 20965 ChimerSeq STARFusion TCGA_RNA-Seq CDK12-IKZF3 CDK12 chr17 37619370 + IKZF3 chr17 37988404 - Exonic hg19 BRCA TCGA-AR-A24U-01A 2 3 Out-of-frame Intra-chr q12 Oncogene q21.1 Tumor suppressor gene Transcription factor Seq+ 20966 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-SAMHD1 GRB7 chr17 37899723 + SAMHD1 chr20 35547922 - Exonic hg19 BRCA TCGA-AR-A24U-01A 2 0 In-Frame Inter-chr q12 q11.23 20967 ChimerSeq STARFusion TCGA_RNA-Seq PHF3-FNTA PHF3 chr6 64423071 + FNTA chr8 42919244 + Exonic hg19 BRCA TCGA-B6-A1KC-01B 3 37 Out-of-frame Inter-chr q12 p11.21 Seq+ 20968 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 BRCA TCGA-B6-A1KC-01B 2 3 CDS-5'UTR Intra-chr p12 p12 Transcription factor 20969 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1467-DSP KIAA1467 chr12 13229077 + DSP chr6 7582875 + Exonic hg19 BRCA TCGA-B6-A1KC-01B 2 2 Out-of-frame Inter-chr p24.3 Tumor suppressor gene 20970 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 BRCA TCGA-A2-A4RY-01A 2 0 In-Frame Intra-chr p11.21 p11.21 20971 ChimerSeq STARFusion TCGA_RNA-Seq MACF1-FAF1 MACF1 chr1 39893286 + FAF1 chr1 51061888 - Exonic hg19 BRCA TCGA-E2-A10A-01A 13 58 In-Frame Intra-chr p34.3 p32.3 Seq+ 20972 ChimerSeq STARFusion TCGA_RNA-Seq MACF1-FAF1 MACF1 chr1 39893959 + FAF1 chr1 51061888 - Exonic hg19 BRCA TCGA-E2-A10A-01A 4 58 In-Frame Intra-chr p34.3 p32.3 Seq+ 20973 ChimerSeq STARFusion TCGA_RNA-Seq RALGPS2-QSOX1 RALGPS2 chr1 178746582 + QSOX1 chr1 180163348 + Exonic hg19 BRCA TCGA-E2-A10A-01A 3 34 Out-of-frame Intra-chr q25.2 q25.2 Seq+ 20974 ChimerSeq STARFusion TCGA_RNA-Seq RALGPS2-QSOX1 RALGPS2 chr1 178745956 + QSOX1 chr1 180163348 + Exonic hg19 BRCA TCGA-E2-A10A-01A 2 34 Out-of-frame Intra-chr q25.2 q25.2 Seq+ 20975 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2C-CENPL PRRC2C chr1 171540560 + CENPL chr1 173793157 - Exonic hg19 BRCA TCGA-E2-A10A-01A 4 13 CDS-5'UTR Intra-chr q24.3 q25.1 Seq+ 20976 ChimerSeq STARFusion TCGA_RNA-Seq ACP6-FAM63A ACP6 chr1 147124252 - FAM63A chr1 150974258 - Exonic hg19 BRCA TCGA-E2-A10A-01A 4 2 Out-of-frame Intra-chr q21.2 20977 ChimerSeq STARFusion TCGA_RNA-Seq RAB3GAP1-MAP4K3 RAB3GAP1 chr2 135911446 + MAP4K3 chr2 39499683 - Exonic hg19 BRCA TCGA-E2-A10A-01A 2 10 In-Frame Intra-chr q21.3 p22.1 Seq+ 20978 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 BRCA TCGA-E2-A10A-01A 4 2 In-Frame Intra-chr p11.21 p11.21 20979 ChimerSeq STARFusion TCGA_RNA-Seq ACBD6-GON4L ACBD6 chr1 180464596 - GON4L chr1 155755165 - Exonic hg19 BRCA TCGA-E2-A10A-01A 2 3 Out-of-frame Intra-chr q25.3 q22 Seq+ 20980 ChimerSeq STARFusion TCGA_RNA-Seq SNRNP48-NISCH SNRNP48 chr6 7595334 + NISCH chr3 52518529 + Exonic hg19 BRCA TCGA-E2-A10A-01A 2 1 In-Frame Inter-chr p24.3 p21.1 Seq+ 20981 ChimerSeq STARFusion TCGA_RNA-Seq VPS45-RPRD2 VPS45 chr1 150049857 + RPRD2 chr1 150429764 + Exonic hg19 BRCA TCGA-E2-A10A-01A 2 0 In-Frame Intra-chr q21.2 q21.2 20982 ChimerSeq STARFusion TCGA_RNA-Seq COL4A5-RGAG1 COL4A5 chrX 107683436 + RGAG1 chrX 109688381 + Exonic hg19 BRCA TCGA-A8-A085-01A 38 652 CDS-5'UTR Intra-chr q22.3 Seq+ 20983 ChimerSeq STARFusion TCGA_RNA-Seq COL4A5-RGAG1 COL4A5 chrX 107683436 + RGAG1 chrX 109693795 + Exonic hg19 BRCA TCGA-A8-A085-01A 15 651 CDS-5'UTR Intra-chr q22.3 Seq+ 20984 ChimerSeq STARFusion TCGA_RNA-Seq COL4A5-RGAG1 COL4A5 chrX 107683436 + RGAG1 chrX 109662230 + Exonic hg19 BRCA TCGA-A8-A085-01A 9 651 CDS-5'UTR Intra-chr q22.3 Seq+ 20985 ChimerSeq STARFusion TCGA_RNA-Seq COL4A5-RGAG1 COL4A5 chrX 107683436 + RGAG1 chrX 109688351 + Exonic hg19 BRCA TCGA-A8-A085-01A 4 651 CDS-5'UTR Intra-chr q22.3 Seq+ 20986 ChimerSeq STARFusion TCGA_RNA-Seq MORC3-DOPEY2 MORC3 chr21 37692601 + DOPEY2 chr21 37660312 + Exonic hg19 BRCA TCGA-A8-A09W-01A 2 1 Out-of-frame Intra-chr q22.12 q22.12 Seq+ 20987 ChimerSeq STARFusion TCGA_RNA-Seq LRIG3-PIP4K2C LRIG3 chr12 59307763 - PIP4K2C chr12 57996754 + Exonic hg19 BRCA TCGA-AR-A1AH-01A 25 123 CDS-3'UTR Intra-chr q14.1 Tumor suppressor gene q13.3 Seq+ 20988 ChimerSeq STARFusion TCGA_RNA-Seq LRIG3-PIP4K2C LRIG3 chr12 59307763 - PIP4K2C chr12 57995709 + Exonic hg19 BRCA TCGA-AR-A1AH-01A 14 122 CDS-3'UTR Intra-chr q14.1 Tumor suppressor gene q13.3 Seq+ 20989 ChimerSeq STARFusion TCGA_RNA-Seq TAF4-TCFL5 TAF4 chr20 60572606 - TCFL5 chr20 61488987 - Exonic hg19 BRCA TCGA-AR-A1AH-01A 7 64 Out-of-frame Intra-chr q13.33 Transcription factor Seq+ 20990 ChimerSeq STARFusion TCGA_RNA-Seq TAF4-TCFL5 TAF4 chr20 60572606 - TCFL5 chr20 61490878 - Exonic hg19 BRCA TCGA-AR-A1AH-01A 5 63 In-Frame Intra-chr q13.33 Transcription factor Seq+ 20991 ChimerSeq STARFusion TCGA_RNA-Seq TAF4-TCFL5 TAF4 chr20 60572606 - TCFL5 chr20 61488990 - Exonic hg19 BRCA TCGA-AR-A1AH-01A 2 63 Out-of-frame Intra-chr q13.33 Transcription factor Seq+ 20992 ChimerSeq STARFusion TCGA_RNA-Seq TAF4-TCFL5 TAF4 chr20 60572606 - TCFL5 chr20 61473449 - Exonic hg19 BRCA TCGA-AR-A1AH-01A 2 63 In-Frame Intra-chr q13.33 Transcription factor Seq+ 20993 ChimerSeq STARFusion TCGA_RNA-Seq DLG1-ANKRD18DP DLG1 chr3 197009550 - ANKRD18DP chr3 197790659 - Exonic hg19 BRCA TCGA-AR-A1AH-01A 6 35 CDS-3'UTR Intra-chr q29 Tumor suppressor gene q29 Seq+ 20994 ChimerSeq STARFusion TCGA_RNA-Seq DLG1-ANKRD18DP DLG1 chr3 197009550 - ANKRD18DP chr3 197792677 - Exonic hg19 BRCA TCGA-AR-A1AH-01A 2 33 CDS-3'UTR Intra-chr q29 Tumor suppressor gene q29 Seq+ 20995 ChimerSeq STARFusion TCGA_RNA-Seq PCNXL2-TAOK3 PCNXL2 chr1 233270761 - TAOK3 chr12 118639270 - Exonic hg19 BRCA TCGA-AR-A1AH-01A 5 15 Out-of-frame Inter-chr q24.23 Seq+ 20996 ChimerSeq STARFusion TCGA_RNA-Seq CCDC91-LYRM5 CCDC91 chr12 28544344 + LYRM5 chr12 25357025 + Exonic hg19 BRCA TCGA-AR-A1AH-01A 5 14 In-Frame Intra-chr p11.22 Seq+ 20997 ChimerSeq STARFusion TCGA_RNA-Seq PCNXL2-TAOK3 PCNXL2 chr1 233270759 - TAOK3 chr12 118639268 - Exonic hg19 BRCA TCGA-AR-A1AH-01A 4 15 In-Frame Inter-chr q24.23 Seq+ 20998 ChimerSeq STARFusion TCGA_RNA-Seq NEBL-DNAJC1 NEBL chr10 21177026 - DNAJC1 chr10 22055238 - Exonic hg19 BRCA TCGA-AR-A1AH-01A 3 10 In-Frame Intra-chr p12.31 p12.31 Seq+ 20999 ChimerSeq STARFusion TCGA_RNA-Seq PRICKLE1-FGD4 PRICKLE1 chr12 42983267 - FGD4 chr12 32791589 + Exonic hg19 BRCA TCGA-AR-A1AH-01A 4 5 5'UTR-CDS Intra-chr q12 Tumor suppressor gene p11.21 Seq+ 21000 ChimerSeq STARFusion TCGA_RNA-Seq AACS-DNAH10 AACS chr12 125599103 + DNAH10 chr12 124419168 + Exonic hg19 BRCA TCGA-AR-A1AH-01A 2 9 Out-of-frame Intra-chr q24.31 Seq+ 21001 ChimerSeq STARFusion TCGA_RNA-Seq ALCAM-EIF2A ALCAM chr3 105086325 + EIF2A chr3 150270143 + Exonic hg19 BRCA TCGA-C8-A12L-01A 28 114 In-Frame Intra-chr q13.11 q25.1 Seq+ 21002 ChimerSeq STARFusion TCGA_RNA-Seq RYBP-TADA3 RYBP chr3 72495647 - TADA3 chr3 9833177 - Exonic hg19 BRCA TCGA-C8-A12L-01A 26 74 CDS-5'UTR Intra-chr p25.3 Seq+ 21003 ChimerSeq STARFusion TCGA_RNA-Seq TAF15-MAN1A2 TAF15 chr17 34169463 + MAN1A2 chr1 118035769 + Exonic hg19 BRCA TCGA-C8-A12L-01A 12 31 In-Frame Inter-chr q12 p12 Seq+ 21004 ChimerSeq STARFusion TCGA_RNA-Seq MAP2K7-SH3GL1 MAP2K7 chr19 7968953 + SH3GL1 chr19 4361793 - Exonic hg19 BRCA TCGA-C8-A12L-01A 4 49 In-Frame Intra-chr p13.2 STE:STE7 p13.3 Seq+ 21005 ChimerSeq STARFusion TCGA_RNA-Seq RPL36-MFSD12 RPL36 chr19 5690338 + MFSD12 chr19 3544937 - Exonic hg19 BRCA TCGA-C8-A12L-01A 6 35 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 21006 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1109-GPR125 KIAA1109 chr4 123260563 + GPR125 chr4 22394313 - Exonic hg19 BRCA TCGA-C8-A12L-01A 5 36 Out-of-frame Intra-chr q27 Seq+ 21007 ChimerSeq STARFusion TCGA_RNA-Seq CDC5L-SPATS1 CDC5L chr6 44387334 + SPATS1 chr6 44344095 + Exonic hg19 BRCA TCGA-C8-A12L-01A 6 24 5'UTR-CDS Intra-chr p21.1 Transcription factor p21.1 Seq+ 21008 ChimerSeq STARFusion TCGA_RNA-Seq LONP1-MAP2K7 LONP1 chr19 5719715 - MAP2K7 chr19 7974640 + Exonic hg19 BRCA TCGA-C8-A12L-01A 7 20 Out-of-frame Intra-chr p13.3 p13.2 STE:STE7 Seq+ 21009 ChimerSeq STARFusion TCGA_RNA-Seq ESRRG-ADCY10 ESRRG chr1 217038403 - ADCY10 chr1 167794093 - Exonic hg19 BRCA TCGA-C8-A12L-01A 2 24 5'UTR-CDS Intra-chr q41 Transcription factor q24.2 Seq+ 21010 ChimerSeq STARFusion TCGA_RNA-Seq PTGFRN-NOTCH2 PTGFRN chr1 117492194 + NOTCH2 chr1 120512367 - Exonic hg19 BRCA TCGA-C8-A12L-01A 6 6 In-Frame Intra-chr p13.1 p12 Oncogene Tumor suppressor gene Seq+ 21011 ChimerSeq STARFusion TCGA_RNA-Seq IGSF3-TBX15 IGSF3 chr1 117142563 - TBX15 chr1 119456802 - Exonic hg19 BRCA TCGA-C8-A12L-01A 3 15 Out-of-frame Intra-chr p13.1 p12 Transcription factor Seq+ 21012 ChimerSeq STARFusion TCGA_RNA-Seq PRPF18-CACNB2 PRPF18 chr10 13647744 + CACNB2 chr10 18439812 + Exonic hg19 BRCA TCGA-C8-A12L-01A 3 15 In-Frame Intra-chr p13 p12.33 Seq+ 21013 ChimerSeq STARFusion TCGA_RNA-Seq RALGPS1-MVB12B RALGPS1 chr9 129831635 + MVB12B chr9 129265456 + Exonic hg19 BRCA TCGA-C8-A12L-01A 4 8 Out-of-frame Intra-chr q33.3 q33.3 Seq+ 21014 ChimerSeq STARFusion TCGA_RNA-Seq LRRC8E-MFSD12 LRRC8E chr19 7965820 + MFSD12 chr19 3546166 - Exonic hg19 BRCA TCGA-C8-A12L-01A 3 8 3'UTR-CDS Intra-chr p13.2 p13.3 Seq+ 21015 ChimerSeq STARFusion TCGA_RNA-Seq C9orf3-PTPDC1 C9orf3 chr9 97522862 + PTPDC1 chr9 96827016 + Exonic hg19 BRCA TCGA-C8-A12L-01A 3 4 CDS-5'UTR Intra-chr q22.32 q22.32 Seq+ 21016 ChimerSeq STARFusion TCGA_RNA-Seq SIGIRR-ANO9 SIGIRR chr11 408073 - ANO9 chr11 430403 - Exonic hg19 BRCA TCGA-C8-A12L-01A 2 6 Out-of-frame Intra-chr p15.5 p15.5 21017 ChimerSeq STARFusion TCGA_RNA-Seq FOXK1-SDK1 FOXK1 chr7 4722499 + SDK1 chr7 4247731 + Exonic hg19 BRCA TCGA-C8-A12L-01A 2 5 Out-of-frame Intra-chr p22.1 Transcription factor p22.2 Seq+ 21018 ChimerSeq STARFusion TCGA_RNA-Seq IGF2R-PCDH17 IGF2R chr6 160390427 + PCDH17 chr13 58240602 + Exonic hg19 BRCA TCGA-C8-A12L-01A 2 0 Out-of-frame Inter-chr q25.3 Oncogene Tumor suppressor gene q21.1 Tumor suppressor gene Seq+ 21019 ChimerSeq STARFusion TCGA_RNA-Seq ATP8B1-NARS ATP8B1 chr18 55398859 - NARS chr18 55278939 - Exonic hg19 BRCA TCGA-AO-A03O-01A 44 143 In-Frame Intra-chr q21.31 q21.31 Seq+ 21020 ChimerSeq STARFusion TCGA_RNA-Seq TRIO-IFT52 TRIO chr5 14502766 + IFT52 chr20 42232400 + Exonic hg19 BRCA TCGA-AO-A03O-01A 6 14 Out-of-frame Inter-chr p15.2 q13.12 Seq+ 21021 ChimerSeq STARFusion TCGA_RNA-Seq VPS26A-GDAP1L1 VPS26A chr10 70892803 + GDAP1L1 chr20 42891870 + Exonic hg19 BRCA TCGA-AO-A03O-01A 4 20 Out-of-frame Inter-chr q22.1 q13.12 Seq+ 21022 ChimerSeq STARFusion TCGA_RNA-Seq GRB2-CD24 GRB2 chr17 73315825 - CD24 chrY 21153224 - Exonic hg19 BRCA TCGA-AO-A03O-01A 3 13 Out-of-frame Inter-chr q25.1 q21 Seq+ 21023 ChimerSeq STARFusion TCGA_RNA-Seq ZNF107-FAM83D ZNF107 chr7 64152338 + FAM83D chr20 37570602 + Exonic hg19 BRCA TCGA-AO-A03O-01A 3 12 Out-of-frame Inter-chr q11.21 Transcription factor q11.23 Seq+ 21024 ChimerSeq STARFusion TCGA_RNA-Seq RIMS4-UNC5B RIMS4 chr20 43384890 - UNC5B chr10 73039578 + Exonic hg19 BRCA TCGA-AO-A03O-01A 3 1 In-Frame Inter-chr q13.12 q22.1 Tumor suppressor gene 21025 ChimerSeq STARFusion TCGA_RNA-Seq SPTAN1-GLE1 SPTAN1 chr9 131314975 + GLE1 chr9 131277808 + Exonic hg19 BRCA TCGA-AO-A03O-01A 2 5 5'UTR-CDS Intra-chr q34.11 q34.11 Seq+ 21026 ChimerSeq STARFusion TCGA_RNA-Seq ZNF565-C21orf58 ZNF565 chr19 36705524 - C21orf58 chr21 47722490 - Exonic hg19 BRCA TCGA-AO-A03O-01A 3 1 5'UTR-CDS Inter-chr q13.12 Transcription factor q22.3 21027 ChimerSeq STARFusion TCGA_RNA-Seq TBK1-ARHGAP5 TBK1 chr12 64849737 + ARHGAP5 chr14 32586346 + Exonic hg19 BRCA TCGA-AO-A03O-01A 2 2 In-Frame Inter-chr q14.2 Other:IKK q12 Seq+ 21028 ChimerSeq STARFusion TCGA_RNA-Seq C8orf87-TRIQK C8orf87 chr8 94146973 - TRIQK chr8 93966792 - Exonic hg19 BRCA TCGA-AO-A03O-01A 2 0 CDS-5'UTR Intra-chr q22.1 q22.1 21029 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-GLI3 RCC1 chr1 28834672 + GLI3 chr7 42188067 - Exonic hg19 BRCA TCGA-AO-A03O-01A 2 0 5'UTR-CDS Inter-chr p35.3 p14.1 Transcription factor 21030 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-GLI3 SNHG3 chr1 28834672 + GLI3 chr7 42188067 - Exonic hg19 BRCA TCGA-AO-A03O-01A 2 0 5'UTR-CDS Inter-chr p35.3 p14.1 Transcription factor 21031 ChimerSeq STARFusion TCGA_RNA-Seq SF3B2-SART1 SF3B2 chr11 65820575 + SART1 chr11 65734730 + Exonic hg19 BRCA TCGA-GM-A2DO-01A 15 36 In-Frame Intra-chr q13.1 q13.1 Seq+ 21032 ChimerSeq STARFusion TCGA_RNA-Seq UBE3C-CACYBP UBE3C chr7 157041274 + CACYBP chr1 174979059 + Exonic hg19 BRCA TCGA-A8-A07S-01A 2 0 Out-of-frame Inter-chr q36.3 q25.1 21033 ChimerSeq STARFusion TCGA_RNA-Seq GPR158-MYO16 GPR158 chr10 25465251 + MYO16 chr13 109644724 + Exonic hg19 BRCA TCGA-C8-A1HO-01A 70 85 In-Frame Inter-chr p12.1 Seq+ 21034 ChimerSeq STARFusion TCGA_RNA-Seq FGFR1-TACC1 FGFR1 chr8 38275746 - TACC1 chr8 38646222 + Exonic hg19 BRCA TCGA-C8-A1HO-01A 8 64 In-Frame Intra-chr p11.23 TK:FGFR Oncogene p11.22 KB Pub Seq+ 21035 ChimerSeq STARFusion TCGA_RNA-Seq FGFR1-TACC1 FGFR1 chr8 38275746 - TACC1 chr8 38585871 + Exonic hg19 BRCA TCGA-C8-A1HO-01A 5 63 CDS-5'UTR Intra-chr p11.23 TK:FGFR Oncogene p11.22 KB Pub Seq+ 21036 ChimerSeq STARFusion TCGA_RNA-Seq FGFR1-TACC1 FGFR1 chr8 38275746 - TACC1 chr8 38599869 + Exonic hg19 BRCA TCGA-C8-A1HO-01A 3 63 CDS-5'UTR Intra-chr p11.23 TK:FGFR Oncogene p11.22 KB Pub Seq+ 21037 ChimerSeq STARFusion TCGA_RNA-Seq AXIN2-LRRC37A3 AXIN2 chr17 63537573 - LRRC37A3 chr17 62852007 - Exonic hg19 BRCA TCGA-C8-A1HO-01A 9 29 In-Frame Intra-chr q24.1 Tumor suppressor gene q24.1 Seq+ 21038 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-GPR149 IGL@ chr22 23165777 + GPR149 chr3 154146760 - Exonic hg19 BRCA TCGA-C8-A1HO-01A 15 0 Out-of-frame Inter-chr q11.22 q25.2 21039 ChimerSeq STARFusion TCGA_RNA-Seq CALCOCO2-ARSG CALCOCO2 chr17 46908440 + ARSG chr17 66416330 + Exonic hg19 BRCA TCGA-C8-A1HO-01A 14 0 5'UTR-CDS Intra-chr q21.32 q24.2 Seq+ 21040 ChimerSeq STARFusion TCGA_RNA-Seq TEX2-TANC2 TEX2 chr17 62289934 - TANC2 chr17 61315175 + Exonic hg19 BRCA TCGA-C8-A1HO-01A 3 17 Out-of-frame Intra-chr q23.3 q23.2 Seq+ 21041 ChimerSeq STARFusion TCGA_RNA-Seq DUSP14-PHB DUSP14 chr17 35850059 + PHB chr17 47486835 - Exonic hg19 BRCA TCGA-C8-A1HO-01A 4 9 5'UTR-CDS Intra-chr q12 q21.33 Tumor suppressor gene Seq+ 21042 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-TACC1 WHSC1L1 chr8 38239317 - TACC1 chr8 38646222 + Exonic hg19 BRCA TCGA-C8-A1HO-01A 2 16 5'UTR-5'UTR Intra-chr p11.23 Tumor suppressor gene p11.22 Seq+ 21043 ChimerSeq STARFusion TCGA_RNA-Seq NF1-CACNA1G NF1 chr17 29592357 + CACNA1G chr17 48676789 + Exonic hg19 BRCA TCGA-C8-A1HO-01A 2 9 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q21.33 Seq+ 21044 ChimerSeq STARFusion TCGA_RNA-Seq MVP-KIF22 MVP chr16 29851780 + KIF22 chr16 29814770 + Exonic hg19 BRCA TCGA-A7-A3J0-01A 17 41 In-Frame Intra-chr p11.2 p11.2 Seq+ 21045 ChimerSeq STARFusion TCGA_RNA-Seq SARS-KIAA1324 SARS chr1 109766670 + KIAA1324 chr1 109704516 + Exonic hg19 BRCA TCGA-A7-A3J0-01A 4 15 In-Frame Intra-chr p13.3 p13.3 Seq+ 21046 ChimerSeq STARFusion TCGA_RNA-Seq MPP2-PPY MPP2 chr17 41975630 - PPY chr17 42019022 - Exonic hg19 BRCA TCGA-A7-A3J0-01A 3 7 CDS-5'UTR Intra-chr q21.31 q21.31 Seq+ 21047 ChimerSeq STARFusion TCGA_RNA-Seq CP-SOX5 CP chr3 148939434 - SOX5 chr12 23999127 - Exonic hg19 BRCA TCGA-A7-A3J0-01A 3 4 Out-of-frame Inter-chr q25.1 p12.1 Transcription factor Seq+ 21048 ChimerSeq STARFusion TCGA_RNA-Seq PDE4A-CHGA PDE4A chr19 10577669 + CHGA chr14 93398897 + Exonic hg19 BRCA TCGA-A7-A3J0-01A 3 1 Out-of-frame Inter-chr p13.2 q32.12 21049 ChimerSeq STARFusion TCGA_RNA-Seq HOOK3-IKBKB HOOK3 chr8 42798588 + IKBKB chr8 42162705 + Exonic hg19 BRCA TCGA-A2-A0D1-01A 5 53 In-Frame Intra-chr p11.21 Oncogene p11.21 Oncogene Seq+ 21050 ChimerSeq STARFusion TCGA_RNA-Seq HOOK3-IKBKB HOOK3 chr8 42798588 + IKBKB chr8 42150961 + Exonic hg19 BRCA TCGA-A2-A0D1-01A 4 53 Out-of-frame Intra-chr p11.21 Oncogene p11.21 Oncogene Seq+ 21051 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R1B-PIPOX PPP1R1B chr17 37792257 + PIPOX chr17 27379938 + Exonic hg19 BRCA TCGA-A2-A0D1-01A 3 12 3'UTR-CDS Intra-chr q12 Tumor suppressor gene q11.2 Seq+ 21052 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R1B-PIPOX PPP1R1B chr17 37791979 + PIPOX chr17 27379938 + Exonic hg19 BRCA TCGA-A2-A0D1-01A 3 12 Out-of-frame Intra-chr q12 Tumor suppressor gene q11.2 Seq+ 21053 ChimerSeq STARFusion TCGA_RNA-Seq C15orf40-HOMER2 C15orf40 chr15 83677300 - HOMER2 chr15 83544156 - Exonic hg19 BRCA TCGA-A2-A0D1-01A 2 0 In-Frame Intra-chr q25.2 q25.2 Tumor suppressor gene 21054 ChimerSeq STARFusion TCGA_RNA-Seq TET2-LANCL1 TET2 chr4 106164935 + LANCL1 chr2 211341136 - Exonic hg19 BRCA TCGA-A2-A1FV-01A 7 34 CDS-5'UTR Inter-chr q24 Oncogene Tumor suppressor gene Transcription factor q34 Seq+ 21055 ChimerSeq STARFusion TCGA_RNA-Seq TET2-LANCL1 TET2 chr4 106164935 + LANCL1 chr2 211336800 - Exonic hg19 BRCA TCGA-A2-A1FV-01A 2 34 Out-of-frame Inter-chr q24 Oncogene Tumor suppressor gene Transcription factor q34 Seq+ 21056 ChimerSeq STARFusion TCGA_RNA-Seq FNTB-PEBP4 FNTB chr14 65453815 + PEBP4 chr8 22584733 - Exonic hg19 BRCA TCGA-A2-A1FV-01A 6 17 In-Frame Inter-chr q23.3 p21.3 Seq+ 21057 ChimerSeq STARFusion TCGA_RNA-Seq WBP4-FANK1 WBP4 chr13 41635811 + FANK1 chr10 127668730 + Exonic hg19 BRCA TCGA-A2-A1FV-01A 2 14 Out-of-frame Inter-chr q14.11 q26.2 Seq+ 21058 ChimerSeq STARFusion TCGA_RNA-Seq PEBP4-UNC5D PEBP4 chr8 22582356 - UNC5D chr8 35406810 + Exonic hg19 BRCA TCGA-A2-A1FV-01A 2 5 In-Frame Intra-chr p21.3 p12 Tumor suppressor gene Seq+ 21059 ChimerSeq STARFusion TCGA_RNA-Seq COMMD1-B3GNT2 COMMD1 chr2 62228117 + B3GNT2 chr2 62449347 + Exonic hg19 BRCA TCGA-A2-A1FV-01A 2 1 CDS-5'UTR Intra-chr p15 p15 21060 ChimerSeq STARFusion TCGA_RNA-Seq TSC22D1-CAPZA2 TSC22D1 chr13 45147299 - CAPZA2 chr7 116528181 + Exonic hg19 BRCA TCGA-A2-A1FV-01A 2 0 Out-of-frame Inter-chr q14.11 Tumor suppressor gene Transcription factor q31.2 21061 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-ALDH3B2 PPFIA1 chr11 70118542 + ALDH3B2 chr11 67435106 - Exonic hg19 BRCA TCGA-D8-A1XS-01A 4 21 5'UTR-5'UTR Intra-chr q13.3 q13.2 Seq+ 21062 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-ALDH3B2 PPFIA1 chr11 70118542 + ALDH3B2 chr11 67434487 - Exonic hg19 BRCA TCGA-D8-A1XS-01A 2 21 5'UTR-5'UTR Intra-chr q13.3 q13.2 Seq+ 21063 ChimerSeq STARFusion TCGA_RNA-Seq AKAP9-ANKRD36 AKAP9 chr7 91652323 + ANKRD36 chr2 97856715 + Exonic hg19 BRCA TCGA-BH-A0B8-01A 2 3 Out-of-frame Inter-chr q21.2 Oncogene q11.2 21064 ChimerSeq STARFusion TCGA_RNA-Seq CD48-SKAP1 CD48 chr1 160681472 - SKAP1 chr17 46266862 - Exonic hg19 BRCA TCGA-BH-A0B8-01A 2 0 In-Frame Inter-chr q23.3 q21.32 21065 ChimerSeq STARFusion TCGA_RNA-Seq ORC6-VPS35 ORC6 chr16 46725032 + VPS35 chr16 46717518 - Exonic hg19 BRCA TCGA-E9-A22H-01A 8 8 In-Frame Intra-chr q11.2 q11.2 Seq+ 21066 ChimerSeq STARFusion TCGA_RNA-Seq ACTN1-SCGN ACTN1 chr14 69343799 - SCGN chr6 25691284 + Exonic hg19 BRCA TCGA-BH-A0DQ-01A 10 26 In-Frame Inter-chr q24.1 p22.2 Seq+ 21067 ChimerSeq STARFusion TCGA_RNA-Seq PHKB-PTPRR PHKB chr16 47549512 + PTPRR chr12 71033057 - Exonic hg19 BRCA TCGA-BH-A1EW-01A 19 39 Out-of-frame Inter-chr q12.1 q15 Seq+ 21068 ChimerSeq STARFusion TCGA_RNA-Seq CNOT2-PDE3A CNOT2 chr12 70637260 + PDE3A chr12 20709594 + Exonic hg19 BRCA TCGA-BH-A1EW-01A 13 4 5'UTR-CDS Intra-chr q15 p12.2 Seq+ 21069 ChimerSeq STARFusion TCGA_RNA-Seq PBX1-COPG2 PBX1 chr1 164532548 + COPG2 chr7 130148500 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 152 1182 In-Frame Inter-chr q23.3 Oncogene Transcription factor q32.2 Seq+ 21070 ChimerSeq STARFusion TCGA_RNA-Seq CPD-AATF CPD chr17 28748001 + AATF chr17 35376304 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 211 583 In-Frame Intra-chr q11.2 Tumor suppressor gene Seq+ 21071 ChimerSeq STARFusion TCGA_RNA-Seq TUFT1-PRKCA TUFT1 chr1 151512902 + PRKCA chr17 64782985 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 143 436 In-Frame Inter-chr q21.3 q24.2 Seq+ 21072 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H11A-TMCC2 ZC3H11A chr1 203800899 + TMCC2 chr1 205238078 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 63 351 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 21073 ChimerSeq STARFusion TCGA_RNA-Seq POGK-FMOD POGK chr1 166810325 + FMOD chr1 203311622 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 52 157 Out-of-frame Intra-chr q24.1 Transcription factor q32.1 Seq+ 21074 ChimerSeq STARFusion TCGA_RNA-Seq RAB3GAP2-CNIH4 RAB3GAP2 chr1 220383730 - CNIH4 chr1 224563497 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 27 155 Out-of-frame Intra-chr q41 q42.11 Seq+ 21075 ChimerSeq STARFusion TCGA_RNA-Seq CDC42SE1-TNKS CDC42SE1 chr1 151031955 - TNKS chr8 9619026 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 30 128 5'UTR-CDS Inter-chr q21.3 p23.1 Seq+ 21076 ChimerSeq STARFusion TCGA_RNA-Seq VMP1-RNFT1 VMP1 chr17 57851246 + RNFT1 chr17 58031507 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 16 150 In-Frame Intra-chr q23.1 q23.1 Seq+ 21077 ChimerSeq STARFusion TCGA_RNA-Seq ATRN-RNF24 ATRN chr20 3557644 + RNF24 chr20 3915720 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 16 67 Out-of-frame Intra-chr p13 p13 Seq+ 21078 ChimerSeq STARFusion TCGA_RNA-Seq LOC441155-TMCC2 LOC441155 chr6 66013223 + TMCC2 chr1 205238076 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 9 74 Out-of-frame Inter-chr q32.1 21079 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6C-PLCB4 TNRC6C chr17 76079247 + PLCB4 chr20 9433994 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 9 57 In-Frame Inter-chr q25.3 p12.3 Seq+ 21080 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6C-PLCB4 TNRC6C chr17 76075622 + PLCB4 chr20 9433994 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 8 57 In-Frame Inter-chr q25.3 p12.3 Seq+ 21081 ChimerSeq STARFusion TCGA_RNA-Seq DYNLL2-SEPT4 DYNLL2 chr17 56161044 + SEPT4 chr17 56603674 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 11 37 5'UTR-5'UTR Intra-chr q22 q22 Tumor suppressor gene Seq+ 21082 ChimerSeq STARFusion TCGA_RNA-Seq ATRN-RNF24 ATRN chr20 3556595 + RNF24 chr20 3915720 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 2 67 In-Frame Intra-chr p13 p13 Seq+ 21083 ChimerSeq STARFusion TCGA_RNA-Seq GON4L-PIPOX GON4L chr1 155791265 - PIPOX chr17 27371877 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 7 46 In-Frame Inter-chr q22 q11.2 Seq+ 21084 ChimerSeq STARFusion TCGA_RNA-Seq MKS1-SPAG9 MKS1 chr17 56288020 - SPAG9 chr17 49109083 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 8 40 Out-of-frame Intra-chr q22 q21.33 Seq+ 21085 ChimerSeq STARFusion TCGA_RNA-Seq PLCG1-BPIFB1 PLCG1 chr20 39766498 + BPIFB1 chr20 31873839 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 9 22 CDS-5'UTR Intra-chr q12 Oncogene q11.21 Seq+ 21086 ChimerSeq STARFusion TCGA_RNA-Seq RABGAP1L-ACBD6 RABGAP1L chr1 174606626 + ACBD6 chr1 180366740 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 7 21 In-Frame Intra-chr q25.1 q25.3 Seq+ 21087 ChimerSeq STARFusion TCGA_RNA-Seq MKS1-SPAG9 MKS1 chr17 56289739 - SPAG9 chr17 49109083 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 2 40 In-Frame Intra-chr q22 q21.33 Seq+ 21088 ChimerSeq STARFusion TCGA_RNA-Seq KDM5B-RABGAP1L KDM5B chr1 202742246 - RABGAP1L chr1 174340117 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 8 13 Out-of-frame Intra-chr q32.1 Transcription factor q25.1 Seq+ 21089 ChimerSeq STARFusion TCGA_RNA-Seq C20orf194-TDRD10 C20orf194 chr20 3354695 - TDRD10 chr1 154514500 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 7 16 In-Frame Inter-chr p13 q21.3 Seq+ 21090 ChimerSeq STARFusion TCGA_RNA-Seq ACBD6-IVNS1ABP ACBD6 chr1 180366651 - IVNS1ABP chr1 185274775 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 3 29 In-Frame Intra-chr q25.3 q25.3 Seq+ 21091 ChimerSeq STARFusion TCGA_RNA-Seq CPD-RABIF CPD chr17 28748909 + RABIF chr1 202848716 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 3 28 Out-of-frame Inter-chr q11.2 Tumor suppressor gene q32.1 Seq+ 21092 ChimerSeq STARFusion TCGA_RNA-Seq VMP1-RNF24 VMP1 chr17 57808883 + RNF24 chr20 3944671 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 5 18 Out-of-frame Inter-chr q23.1 p13 Seq+ 21093 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHM1P-UTP18 PLEKHM1P chr17 62781340 - UTP18 chr17 49357366 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 5 8 3'UTR-CDS Intra-chr q21.33 21094 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-RNF2 TANC2 chr17 61345234 + RNF2 chr1 185056684 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 5 8 CDS-5'UTR Inter-chr q23.2 q25.3 Oncogene Seq+ 21095 ChimerSeq STARFusion TCGA_RNA-Seq THEM4-S100A10 THEM4 chr1 151881836 - S100A10 chr1 151958727 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 5 8 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 21096 ChimerSeq STARFusion TCGA_RNA-Seq MPZL1-PDE4DIP MPZL1 chr1 167691479 + PDE4DIP chr1 144946742 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 4 9 Out-of-frame Intra-chr q24.2 q21.2 Oncogene Seq+ 21097 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2IP-ZBTB10 ERBB2IP chr5 65290692 + ZBTB10 chr8 81411729 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 2 14 Out-of-frame Inter-chr q21.13 Transcription factor Seq+ 21098 ChimerSeq STARFusion TCGA_RNA-Seq COPG2-KRT18P55 COPG2 chr7 130337709 - KRT18P55 chr17 26604437 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 2 11 CDS-3'UTR Inter-chr q32.2 q11.2 21099 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-DISP1 BCAS3 chr17 59067596 + DISP1 chr1 223116149 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 4 2 CDS-5'UTR Inter-chr q23.2 q41 Seq+ 21100 ChimerSeq STARFusion TCGA_RNA-Seq PRKCA-CRYBA1 PRKCA chr17 64302245 + CRYBA1 chr17 27576160 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 2 7 In-Frame Intra-chr q24.2 q11.2 Seq+ 21101 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-MAP3K3 RPS6KB1 chr17 58022879 + MAP3K3 chr17 61723394 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 2 6 Out-of-frame Intra-chr q23.1 Oncogene q23.3 STE:STE11 Seq+ 21102 ChimerSeq STARFusion TCGA_RNA-Seq FAM102A-NAIF1 FAM102A chr9 130715854 - NAIF1 chr9 130826179 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 2 5 Out-of-frame Intra-chr q34.11 q34.11 Transcription factor Seq+ 21103 ChimerSeq STARFusion TCGA_RNA-Seq PTRH2-BCAS3 PTRH2 chr17 57784732 - BCAS3 chr17 58987893 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 2 1 5'UTR-CDS Intra-chr q23.1 q23.2 21104 ChimerSeq STARFusion TCGA_RNA-Seq ANAPC16-CTBP2 ANAPC16 chr10 73975830 + CTBP2 chr10 126727724 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 2 0 5'UTR-5'UTR Intra-chr q22.1 q26.13 21105 ChimerSeq STARFusion TCGA_RNA-Seq LOC100131234-MFSD4 LOC100131234 chr1 198906355 - MFSD4 chr1 205548879 + Exonic hg19 BRCA TCGA-A8-A08J-01A 79 145 3'UTR-CDS Intra-chr 21106 ChimerSeq STARFusion TCGA_RNA-Seq PSMD11-CEP112 PSMD11 chr17 30774064 + CEP112 chr17 64179425 - Exonic hg19 BRCA TCGA-A8-A08J-01A 57 141 CDS-5'UTR Intra-chr q11.2 q24.1 Seq+ 21107 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-VMP1 BCAS3 chr17 58988063 + VMP1 chr17 57895073 + Exonic hg19 BRCA TCGA-A8-A08J-01A 25 101 In-Frame Intra-chr q23.2 q23.1 Seq+ 21108 ChimerSeq STARFusion TCGA_RNA-Seq UBE2G1-SPNS3 UBE2G1 chr17 4269566 - SPNS3 chr17 4381867 + Exonic hg19 BRCA TCGA-A8-A08J-01A 19 115 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 21109 ChimerSeq STARFusion TCGA_RNA-Seq CBX1-APOH CBX1 chr17 46178630 - APOH chr17 64225540 - Exonic hg19 BRCA TCGA-A8-A08J-01A 25 70 5'UTR-5'UTR Intra-chr q21.32 q24.2 21110 ChimerSeq STARFusion TCGA_RNA-Seq PWP2-SFSWAP PWP2 chr21 45537844 + SFSWAP chr12 132271008 + Exonic hg19 BRCA TCGA-A8-A08J-01A 13 66 In-Frame Inter-chr q22.3 q24.33 Seq+ 21111 ChimerSeq STARFusion TCGA_RNA-Seq ZFP91-RAB6A ZFP91 chr11 58352357 + RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-A8-A08J-01A 5 21 Out-of-frame Intra-chr q12.1 Transcription factor q13.4 Seq+ 21112 ChimerSeq STARFusion TCGA_RNA-Seq USP22-MYH10 USP22 chr17 20919065 - MYH10 chr17 8508300 - Exonic hg19 BRCA TCGA-A8-A08J-01A 5 15 Out-of-frame Intra-chr p11.2 p13.1 Seq+ 21113 ChimerSeq STARFusion TCGA_RNA-Seq PGS1-TM9SF1 PGS1 chr17 76396936 + TM9SF1 chr14 24662475 - Exonic hg19 BRCA TCGA-A8-A08J-01A 2 17 Out-of-frame Inter-chr q25.3 q12 Seq+ 21114 ChimerSeq STARFusion TCGA_RNA-Seq MRPL48-DTX4 MRPL48 chr11 73536841 + DTX4 chr11 58972149 + Exonic hg19 BRCA TCGA-A8-A08J-01A 5 4 In-Frame Intra-chr q13.4 q12.1 Seq+ 21115 ChimerSeq STARFusion TCGA_RNA-Seq SPATA13-PRRC2C SPATA13 chr13 24874613 + PRRC2C chr1 171493960 + Exonic hg19 BRCA TCGA-A8-A08J-01A 2 15 Out-of-frame Inter-chr q12.12 q24.3 Seq+ 21116 ChimerSeq STARFusion TCGA_RNA-Seq PTRH2-RHBDL3 PTRH2 chr17 57784732 - RHBDL3 chr17 30621313 + Exonic hg19 BRCA TCGA-A8-A08J-01A 4 2 5'UTR-CDS Intra-chr q23.1 q11.2 Seq+ 21117 ChimerSeq STARFusion TCGA_RNA-Seq RALGAPB-EPB41L1 RALGAPB chr20 37146643 + EPB41L1 chr20 34761686 + Exonic hg19 BRCA TCGA-A8-A08J-01A 2 10 CDS-5'UTR Intra-chr q11.23 q11.23 Seq+ 21118 ChimerSeq STARFusion TCGA_RNA-Seq NCOR1-ZNF287 NCOR1 chr17 16089868 - ZNF287 chr17 16456740 - Exonic hg19 BRCA TCGA-A8-A08J-01A 3 4 Out-of-frame Intra-chr p11.2 Oncogene p11.2 Transcription factor Seq+ 21119 ChimerSeq STARFusion TCGA_RNA-Seq ADNP-MMP24 ADNP chr20 49518554 - MMP24 chr20 33862075 + Exonic hg19 BRCA TCGA-A8-A08J-01A 3 2 Out-of-frame Intra-chr q13.13 Transcription factor q11.22 Seq+ 21120 ChimerSeq STARFusion TCGA_RNA-Seq ADNP-MMP24 ADNP chr20 49518554 - MMP24 chr20 33859372 + Exonic hg19 BRCA TCGA-A8-A08J-01A 2 2 Out-of-frame Intra-chr q13.13 Transcription factor q11.22 Seq+ 21121 ChimerSeq STARFusion TCGA_RNA-Seq PUS1-ICOSLG PUS1 chr12 132416857 + ICOSLG chr21 45658371 - Exonic hg19 BRCA TCGA-A8-A08J-01A 2 2 Out-of-frame Inter-chr q24.33 q22.3 Seq+ 21122 ChimerSeq STARFusion TCGA_RNA-Seq PRKCA-PHB PRKCA chr17 64302245 + PHB chr17 47490653 - Exonic hg19 BRCA TCGA-A8-A08J-01A 2 1 CDS-5'UTR Intra-chr q24.2 q21.33 Tumor suppressor gene Seq+ 21123 ChimerSeq STARFusion TCGA_RNA-Seq SYT17-TMC7 SYT17 chr16 19195469 + TMC7 chr16 19067864 + Exonic hg19 BRCA TCGA-A8-A08J-01A 2 1 Out-of-frame Intra-chr p12.3 p12.3 21124 ChimerSeq STARFusion TCGA_RNA-Seq CCDC90A-S100A10 CCDC90A chr6 13800573 - S100A10 chr1 151958727 - Exonic hg19 BRCA TCGA-E9-A3QA-01A 41 149 CDS-5'UTR Inter-chr q21.3 Seq+ 21125 ChimerSeq STARFusion TCGA_RNA-Seq TNS3-LOC100507412 TNS3 chr7 47520701 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-E9-A3QA-01A 12 32 5'UTR-5'UTR Inter-chr p12.3 21126 ChimerSeq STARFusion TCGA_RNA-Seq PTPRM-KCTD1 PTPRM chr18 7926681 + KCTD1 chr18 24039889 - Exonic hg19 BRCA TCGA-E9-A3QA-01A 2 16 In-Frame Intra-chr p11.23 q11.2 Seq+ 21127 ChimerSeq STARFusion TCGA_RNA-Seq AP5Z1-SGCA AP5Z1 chr7 4827283 + SGCA chr17 48247527 + Exonic hg19 BRCA TCGA-E2-A156-01A 4 9 Out-of-frame Inter-chr p22.1 q21.33 Seq+ 21128 ChimerSeq STARFusion TCGA_RNA-Seq LRP12-KCNB2 LRP12 chr8 105601047 - KCNB2 chr8 73479877 + Exonic hg19 BRCA TCGA-AR-A0TV-01A 8 22 CDS-5'UTR Intra-chr q22.3 q21.11 Seq+ 21129 ChimerSeq STARFusion TCGA_RNA-Seq HECTD1-PRPF39 HECTD1 chr14 31675003 - PRPF39 chr14 45564424 + Exonic hg19 BRCA TCGA-AR-A0TV-01A 2 10 CDS-5'UTR Intra-chr q12 q21.2 Seq+ 21130 ChimerSeq STARFusion TCGA_RNA-Seq GRHL2-ZFHX4 GRHL2 chr8 102505017 + ZFHX4 chr8 77616278 + Exonic hg19 BRCA TCGA-AR-A0TV-01A 2 3 CDS-5'UTR Intra-chr q22.3 Transcription factor q21.13 Transcription factor Seq+ 21131 ChimerSeq STARFusion TCGA_RNA-Seq CD151-EFCAB4A CD151 chr11 837354 + EFCAB4A chr11 831224 + Exonic hg19 BRCA TCGA-D8-A27M-01A 117 492 In-Frame Intra-chr p15.5 Seq+ 21132 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-SDK2 SLC39A11 chr17 71084796 - SDK2 chr17 71335079 - Exonic hg19 BRCA TCGA-D8-A27M-01A 18 74 In-Frame Intra-chr q25.1 q25.1 Seq+ 21133 ChimerSeq STARFusion TCGA_RNA-Seq NFATC2IP-HS3ST4 NFATC2IP chr16 28970421 + HS3ST4 chr16 26146933 + Exonic hg19 BRCA TCGA-D8-A27M-01A 4 14 Out-of-frame Intra-chr p11.2 p12.1 Seq+ 21134 ChimerSeq STARFusion TCGA_RNA-Seq LRP2-LOC643339 LRP2 chr2 169999184 - LOC643339 chr12 93398374 - Exonic hg19 BRCA TCGA-D8-A27M-01A 3 15 CDS-3'UTR Inter-chr q31.1 21135 ChimerSeq STARFusion TCGA_RNA-Seq NAALADL2-NLGN1 NAALADL2 chr3 174577240 + NLGN1 chr3 173322069 + Exonic hg19 BRCA TCGA-D8-A27M-01A 4 9 CDS-5'UTR Intra-chr q26.31 q26.31 Seq+ 21136 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP35-YWHAZ ARHGAP35 chr19 47492932 + YWHAZ chr8 101937267 - Exonic hg19 BRCA TCGA-D8-A27M-01A 4 8 Out-of-frame Inter-chr q13.32 Transcription factor q22.3 Seq+ 21137 ChimerSeq STARFusion TCGA_RNA-Seq NFATC1-LINC00645 NFATC1 chr18 77246937 + LINC00645 chr14 28105626 + Exonic hg19 BRCA TCGA-D8-A27M-01A 2 7 Out-of-frame Inter-chr q23 Transcription factor q12 21138 ChimerSeq STARFusion TCGA_RNA-Seq CHD2-LOC100507217 CHD2 chr15 93444529 + LOC100507217 chr15 93440954 + Exonic hg19 BRCA TCGA-D8-A27M-01A 2 1 CDS-5'UTR Intra-chr q26.1 21139 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 BRCA TCGA-D8-A27M-01A 2 0 In-Frame Intra-chr p11.21 p11.21 21140 ChimerSeq STARFusion TCGA_RNA-Seq SMC5-IMMP2L SMC5 chr9 72882891 + IMMP2L chr7 110603621 - Exonic hg19 BRCA TCGA-AO-A124-01A 164 497 In-Frame Inter-chr q21.12 q31.1 Seq+ 21141 ChimerSeq STARFusion TCGA_RNA-Seq ILF3-SLC44A2 ILF3 chr19 10765163 + SLC44A2 chr19 10736929 + Exonic hg19 BRCA TCGA-AO-A124-01A 108 127 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 21142 ChimerSeq STARFusion TCGA_RNA-Seq TAF2-DSCC1 TAF2 chr8 120814034 - DSCC1 chr8 120859320 - Exonic hg19 BRCA TCGA-AO-A124-01A 44 325 In-Frame Intra-chr q24.12 q24.12 Seq+ 21143 ChimerSeq STARFusion TCGA_RNA-Seq KDM5A-NINJ2 KDM5A chr12 404739 - NINJ2 chr12 675344 - Exonic hg19 BRCA TCGA-AO-A124-01A 24 43 In-Frame Intra-chr p13.33 Tumor suppressor gene p13.33 Seq+ 21144 ChimerSeq STARFusion TCGA_RNA-Seq FXN-SMC5 FXN chr9 71679951 + SMC5 chr9 72879220 + Exonic hg19 BRCA TCGA-AO-A124-01A 8 42 In-Frame Intra-chr q21.11 Tumor suppressor gene q21.12 Seq+ 21145 ChimerSeq STARFusion TCGA_RNA-Seq SEMA4C-WNT5B SEMA4C chr2 97529419 - WNT5B chr12 1740464 + Exonic hg19 BRCA TCGA-AO-A124-01A 8 18 CDS-5'UTR Inter-chr q11.2 p13.33 Seq+ 21146 ChimerSeq STARFusion TCGA_RNA-Seq TESK2-GPR37L1 TESK2 chr1 45923236 - GPR37L1 chr1 202096869 + Exonic hg19 BRCA TCGA-AO-A124-01A 5 22 In-Frame Intra-chr p34.1 TKL:LISK q32.1 Seq+ 21147 ChimerSeq STARFusion TCGA_RNA-Seq AFG3L1P-TUBB3 AFG3L1P chr16 90048331 + TUBB3 chr16 89998979 + Exonic hg19 BRCA TCGA-AO-A124-01A 3 26 5'UTR-5'UTR Intra-chr q24.3 q24.3 Seq+ 21148 ChimerSeq STARFusion TCGA_RNA-Seq IGF2BP3-ACSM1 IGF2BP3 chr7 23390924 - ACSM1 chr16 20682993 - Exonic hg19 BRCA TCGA-AO-A124-01A 2 23 In-Frame Inter-chr p15.3 p12.3 Seq+ 21149 ChimerSeq STARFusion TCGA_RNA-Seq CRB3-RTP1 CRB3 chr19 6466620 + RTP1 chr3 186915378 + Exonic hg19 BRCA TCGA-AO-A124-01A 3 13 In-Frame Inter-chr p13.3 q27.3 Seq+ 21150 ChimerSeq STARFusion TCGA_RNA-Seq FIG4-WASF1 FIG4 chr6 110064975 + WASF1 chr6 110434663 - Exonic hg19 BRCA TCGA-AO-A124-01A 4 9 Out-of-frame Intra-chr q21 q21 Seq+ 21151 ChimerSeq STARFusion TCGA_RNA-Seq STK3-RREB1 STK3 chr8 99591892 - RREB1 chr6 7211037 + Exonic hg19 BRCA TCGA-AO-A124-01A 4 3 Out-of-frame Inter-chr q22.2 p24.3 Transcription factor Seq+ 21152 ChimerSeq STARFusion TCGA_RNA-Seq DMC1-FAM227A DMC1 chr22 38948671 - FAM227A chr22 38982204 - Exonic hg19 BRCA TCGA-AO-A124-01A 2 6 Out-of-frame Intra-chr q13.1 q13.1 21153 ChimerSeq STARFusion TCGA_RNA-Seq SMU1-UBE2R2 SMU1 chr9 33044842 - UBE2R2 chr9 33886879 + Exonic hg19 BRCA TCGA-AO-A124-01A 3 2 3'UTR-CDS Intra-chr p21.1 p13.3 21154 ChimerSeq STARFusion TCGA_RNA-Seq AP1M1-CIB3 AP1M1 chr19 16317219 + CIB3 chr19 16279095 - Exonic hg19 BRCA TCGA-AO-A124-01A 2 5 In-Frame Intra-chr p13.11 p13.11 21155 ChimerSeq STARFusion TCGA_RNA-Seq CDK5RAP1-ZMIZ2 CDK5RAP1 chr20 31989234 - ZMIZ2 chr7 44798880 + Exonic hg19 BRCA TCGA-BH-A0DI-01A 2 0 5'UTR-CDS Inter-chr q11.21 p13 21156 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L3-LSM14A SIPA1L3 chr19 38519796 + LSM14A chr19 34706029 + Exonic hg19 BRCA TCGA-AN-A0XN-01A 4 8 5'UTR-CDS Intra-chr q13.13 Seq+ 21157 ChimerSeq STARFusion TCGA_RNA-Seq LTBP1-CDH23 LTBP1 chr2 33447218 + CDH23 chr10 73269839 + Exonic hg19 BRCA TCGA-AN-A0XN-01A 4 6 In-Frame Inter-chr p22.3 q22.1 Seq+ 21158 ChimerSeq STARFusion TCGA_RNA-Seq FLJ43663-RSBN1L FLJ43663 chr7 130792479 - RSBN1L chr7 77378741 + Exonic hg19 BRCA TCGA-AN-A0XN-01A 3 4 3'UTR-CDS Intra-chr q11.23 21159 ChimerSeq STARFusion TCGA_RNA-Seq FAM160A1-DDX60 FAM160A1 chr4 152403800 + DDX60 chr4 169146827 - Exonic hg19 BRCA TCGA-AN-A0XN-01A 2 6 5'UTR-CDS Intra-chr q31.3 q32.3 Seq+ 21160 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT3-NAALADL2 AGPAT3 chr21 45323900 + NAALADL2 chr3 175520793 + Exonic hg19 BRCA TCGA-AN-A0XN-01A 2 3 5'UTR-CDS Inter-chr q22.3 q26.31 Seq+ 21161 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D12-MORN4 TBC1D12 chr10 96234540 + MORN4 chr10 99379440 - Exonic hg19 BRCA TCGA-AN-A0XN-01A 2 3 CDS-5'UTR Intra-chr q23.33 q24.2 Seq+ 21162 ChimerSeq STARFusion TCGA_RNA-Seq CANT1-PSMD3 CANT1 chr17 77005746 - PSMD3 chr17 38140547 + Exonic hg19 BRCA TCGA-C8-A135-01A 28 89 5'UTR-CDS Intra-chr q25.3 q21.1 Seq+ 21163 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-IKZF3 STARD3 chr17 37793484 + IKZF3 chr17 37914218 - Exonic hg19 BRCA TCGA-C8-A135-01A 20 63 5'UTR-3'UTR Intra-chr q12 q21.1 Tumor suppressor gene Transcription factor Seq+ 21164 ChimerSeq STARFusion TCGA_RNA-Seq TMX2-C11orf80 TMX2 chr11 57480279 + C11orf80 chr11 66563752 + Exonic hg19 BRCA TCGA-C8-A135-01A 9 42 In-Frame Intra-chr q12.1 q13.2 Seq+ 21165 ChimerSeq STARFusion TCGA_RNA-Seq TMX2-C11orf80 TMX2 chr11 57480279 + C11orf80 chr11 66568112 + Exonic hg19 BRCA TCGA-C8-A135-01A 4 42 In-Frame Intra-chr q12.1 q13.2 Seq+ 21166 ChimerSeq STARFusion TCGA_RNA-Seq VASP-EXOC3L2 VASP chr19 46011034 + EXOC3L2 chr19 45721577 - Exonic hg19 BRCA TCGA-C8-A135-01A 7 24 Out-of-frame Intra-chr q13.32 q13.32 Seq+ 21167 ChimerSeq STARFusion TCGA_RNA-Seq PACS1-ZDHHC24 PACS1 chr11 65838313 + ZDHHC24 chr11 66311452 - Exonic hg19 BRCA TCGA-C8-A135-01A 6 18 In-Frame Intra-chr q13.1 q13.2 Seq+ 21168 ChimerSeq STARFusion TCGA_RNA-Seq CNKSR1-MAN1C1 CNKSR1 chr1 26511103 + MAN1C1 chr1 26098148 + Exonic hg19 BRCA TCGA-C8-A135-01A 6 16 In-Frame Intra-chr p36.11 p36.11 Seq+ 21169 ChimerSeq STARFusion TCGA_RNA-Seq TET3-C2orf78 TET3 chr2 74275538 + C2orf78 chr2 74040604 + Exonic hg19 BRCA TCGA-C8-A135-01A 5 12 In-Frame Intra-chr p13.1 Transcription factor p13.1 Seq+ 21170 ChimerSeq STARFusion TCGA_RNA-Seq C19orf47-BLVRB C19orf47 chr19 40827935 - BLVRB chr19 40964452 - Exonic hg19 BRCA TCGA-C8-A135-01A 4 15 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 21171 ChimerSeq STARFusion TCGA_RNA-Seq NUP214-TOM1L2 NUP214 chr9 134072803 + TOM1L2 chr17 17810845 - Exonic hg19 BRCA TCGA-C8-A135-01A 3 7 In-Frame Inter-chr q34.13 Oncogene p11.2 Tumor suppressor gene Seq+ 21172 ChimerSeq STARFusion TCGA_RNA-Seq CACNB1-PPP4C CACNB1 chr17 37339966 - PPP4C chr16 30094715 + Exonic hg19 BRCA TCGA-C8-A135-01A 2 10 In-Frame Inter-chr q12 p11.2 Seq+ 21173 ChimerSeq STARFusion TCGA_RNA-Seq EXD3-ZMYND19 EXD3 chr9 140317566 - ZMYND19 chr9 140483170 - Exonic hg19 BRCA TCGA-C8-A135-01A 3 2 5'UTR-CDS Intra-chr q34.3 q34.3 Seq+ 21174 ChimerSeq STARFusion TCGA_RNA-Seq STK24-LOC100506403 STK24 chr13 99171497 - LOC100506403 chr21 36834323 - Exonic hg19 BRCA TCGA-C8-A135-01A 3 2 Out-of-frame Inter-chr q32.2 21175 ChimerSeq STARFusion TCGA_RNA-Seq KCNMA1-DLG5 KCNMA1 chr10 79163620 - DLG5 chr10 79552301 - Exonic hg19 BRCA TCGA-C8-A135-01A 2 5 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 21176 ChimerSeq STARFusion TCGA_RNA-Seq PTRH2-STXBP4 PTRH2 chr17 57784732 - STXBP4 chr17 53218671 + Exonic hg19 BRCA TCGA-C8-A135-01A 2 4 5'UTR-CDS Intra-chr q23.1 q22 Seq+ 21177 ChimerSeq STARFusion TCGA_RNA-Seq TOM1L2-NUP214 TOM1L2 chr17 17875576 - NUP214 chr9 134072603 + Exonic hg19 BRCA TCGA-C8-A135-01A 2 4 In-Frame Inter-chr p11.2 Tumor suppressor gene q34.13 Oncogene 21178 ChimerSeq STARFusion TCGA_RNA-Seq PHF3-NUS1 PHF3 chr6 64356700 + NUS1 chr6 118014205 + Exonic hg19 BRCA TCGA-C8-A135-01A 2 3 In-Frame Intra-chr q12 q22.1 Seq+ 21179 ChimerSeq STARFusion TCGA_RNA-Seq TP53TG1-TMEM243 TP53TG1 chr7 86970839 - TMEM243 chr7 86828373 - Exonic hg19 BRCA TCGA-C8-A135-01A 2 0 Out-of-frame Intra-chr q21.12 q21.12 21180 ChimerSeq STARFusion TCGA_RNA-Seq QKI-PACRG QKI chr6 163899928 + PACRG chr6 163483182 + Exonic hg19 BRCA TCGA-E9-A1ND-01A 23 95 In-Frame Intra-chr q26 q26 Tumor suppressor gene Seq+ 21181 ChimerSeq STARFusion TCGA_RNA-Seq CSE1L-ARFGEF2 CSE1L chr20 47711500 + ARFGEF2 chr20 47641850 + Exonic hg19 BRCA TCGA-E9-A1ND-01A 18 45 In-Frame Intra-chr q13.13 q13.13 Seq+ 21182 ChimerSeq STARFusion TCGA_RNA-Seq ILF3-ZNF627 ILF3 chr19 10787986 + ZNF627 chr19 11686065 + Exonic hg19 BRCA TCGA-E9-A1ND-01A 12 42 CDS-5'UTR Intra-chr p13.2 p13.2 Transcription factor Seq+ 21183 ChimerSeq STARFusion TCGA_RNA-Seq JAK2-INSL4 JAK2 chr9 5126446 + INSL4 chr9 5233654 + Exonic hg19 BRCA TCGA-E9-A1ND-01A 7 9 Out-of-frame Intra-chr p24.1 TK:JakA Oncogene p24.1 Seq+ 21184 ChimerSeq STARFusion TCGA_RNA-Seq AKAP8L-BRD4 AKAP8L chr19 15510113 - BRD4 chr19 15383944 - Exonic hg19 BRCA TCGA-E9-A1ND-01A 3 12 CDS-5'UTR Intra-chr p13.12 Transcription factor p13.12 Atypical:BRD Seq+ 21185 ChimerSeq STARFusion TCGA_RNA-Seq PRICKLE1-ZCRB1 PRICKLE1 chr12 42863252 - ZCRB1 chr12 42717906 - Exonic hg19 BRCA TCGA-E9-A1ND-01A 2 11 CDS-5'UTR Intra-chr q12 Tumor suppressor gene q12 Seq+ 21186 ChimerSeq STARFusion TCGA_RNA-Seq FAM160B2-DMTN FAM160B2 chr8 21947365 + DMTN chr8 21927392 + Exonic hg19 BRCA TCGA-E9-A1ND-01A 2 8 Out-of-frame Intra-chr p21.3 p21.3 Seq+ 21187 ChimerSeq STARFusion TCGA_RNA-Seq FAM160B2-DMTN FAM160B2 chr8 21946809 + DMTN chr8 21927392 + Exonic hg19 BRCA TCGA-E9-A1ND-01A 2 8 Out-of-frame Intra-chr p21.3 p21.3 Seq+ 21188 ChimerSeq STARFusion TCGA_RNA-Seq DCTN2-RN7SKP261 DCTN2 chr12 57939811 - RN7SKP261 chr12 80737609 - Exonic hg19 BRCA TCGA-E2-A14W-01A 356 780 Out-of-frame Intra-chr q13.3 q21.31 21189 ChimerSeq STARFusion TCGA_RNA-Seq LINC00993-SNX6 LINC00993 chr10 37635757 + SNX6 chr14 35102224 - Exonic hg19 BRCA TCGA-E2-A14W-01A 3 30 Out-of-frame Inter-chr p11.21 q13.1 21190 ChimerSeq STARFusion TCGA_RNA-Seq PPM1H-FAM19A2 PPM1H chr12 63328272 - FAM19A2 chr12 62104198 - Exonic hg19 BRCA TCGA-E2-A14W-01A 2 21 Out-of-frame Intra-chr q14.2 q14.1 Seq+ 21191 ChimerSeq STARFusion TCGA_RNA-Seq DCLK1-SERPINE3 DCLK1 chr13 36686006 - SERPINE3 chr13 51935414 + Exonic hg19 BRCA TCGA-A8-A09V-01A 3 16 Out-of-frame Intra-chr q13.3 CAMK:DCAMKL q14.3 Seq+ 21192 ChimerSeq STARFusion TCGA_RNA-Seq ERGIC1-JAKMIP2 ERGIC1 chr5 172261436 + JAKMIP2 chr5 146991934 - Exonic hg19 BRCA TCGA-AQ-A7U7-01A 4 38 Out-of-frame Intra-chr q35.1 q32 Seq+ 21193 ChimerSeq STARFusion TCGA_RNA-Seq OTUD5-TEX101 OTUD5 chrX 48783123 - TEX101 chr19 43906918 + Exonic hg19 BRCA TCGA-AQ-A7U7-01A 2 0 CDS-5'UTR Inter-chr p11.23 q13.31 21194 ChimerSeq STARFusion TCGA_RNA-Seq UBE2F-RAMP1 UBE2F chr2 238925275 + RAMP1 chr2 238820170 + Exonic hg19 BRCA TCGA-LL-A9Q3-01A 32 114 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 21195 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D13-ODF2 TBC1D13 chr9 131559493 + ODF2 chr9 131245095 + Exonic hg19 BRCA TCGA-LL-A9Q3-01A 10 38 In-Frame Intra-chr q34.11 q34.11 Seq+ 21196 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D13-ODF2 TBC1D13 chr9 131559493 + ODF2 chr9 131246217 + Exonic hg19 BRCA TCGA-LL-A9Q3-01A 2 38 In-Frame Intra-chr q34.11 q34.11 Seq+ 21197 ChimerSeq STARFusion TCGA_RNA-Seq TRPS1-LINC00536 TRPS1 chr8 116680772 - LINC00536 chr8 116989661 - Exonic hg19 BRCA TCGA-LL-A9Q3-01A 2 5 5'UTR-3'UTR Intra-chr q23.3 Transcription factor q23.3 Seq+ 21198 ChimerSeq STARFusion TCGA_RNA-Seq SRPK1-DDAH1 SRPK1 chr6 35836787 - DDAH1 chr1 85824530 - Exonic hg19 BRCA TCGA-BH-A5IZ-01A 23 56 In-Frame Inter-chr p21.31 CMGC:SRPK p22.3 Seq+ 21199 ChimerSeq STARFusion TCGA_RNA-Seq LARP4-RYR3 LARP4 chr12 50794811 + RYR3 chr15 34028436 + Exonic hg19 BRCA TCGA-BH-A5IZ-01A 6 16 Out-of-frame Inter-chr q13.12 q13.3 Seq+ 21200 ChimerSeq STARFusion TCGA_RNA-Seq RYR3-LARP4 RYR3 chr15 34034645 + LARP4 chr12 50821545 + Exonic hg19 BRCA TCGA-BH-A5IZ-01A 2 18 In-Frame Inter-chr q13.3 q13.12 Seq+ 21201 ChimerSeq STARFusion TCGA_RNA-Seq LOC654342-LSP1 LOC654342 chr2 91842946 - LSP1 chr11 1908704 + Exonic hg19 BRCA TCGA-A7-A5ZW-01A 2 0 3'UTR-CDS Inter-chr p15.5 21202 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-LBP SSH2 chr17 28022477 - LBP chr20 37002581 + Exonic hg19 BRCA TCGA-AN-A0FT-01A 21 144 Out-of-frame Inter-chr q11.2 q11.23 Seq+ 21203 ChimerSeq STARFusion TCGA_RNA-Seq WDR45B-SEPT4 WDR45B chr17 80583265 - SEPT4 chr17 56599462 - Exonic hg19 BRCA TCGA-AN-A0FT-01A 31 41 Out-of-frame Intra-chr q25.3 q22 Tumor suppressor gene Seq+ 21204 ChimerSeq STARFusion TCGA_RNA-Seq STAT3-C17orf102 STAT3 chr17 40497577 - C17orf102 chr17 32903593 - Exonic hg19 BRCA TCGA-AN-A0FT-01A 6 16 CDS-3'UTR Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q12 Seq+ 21205 ChimerSeq STARFusion TCGA_RNA-Seq PRDM11-MRPS9 PRDM11 chr11 45169132 + MRPS9 chr2 105687771 + Exonic hg19 BRCA TCGA-AN-A0FT-01A 3 6 5'UTR-CDS Inter-chr p11.2 Tumor suppressor gene q12.1 Seq+ 21206 ChimerSeq STARFusion TCGA_RNA-Seq CRCP-CYYR1 CRCP chr7 65599361 + CYYR1 chr21 27938687 - Exonic hg19 BRCA TCGA-AN-A0FT-01A 2 9 Out-of-frame Inter-chr q11.21 q21.3 Seq+ 21207 ChimerSeq STARFusion TCGA_RNA-Seq SOX13-MERTK SOX13 chr1 204083733 + MERTK chr2 112725714 + Exonic hg19 BRCA TCGA-AN-A0FT-01A 2 3 In-Frame Inter-chr q32.1 Transcription factor q13 Seq+ 21208 ChimerSeq STARFusion TCGA_RNA-Seq BTBD9-CLPSL1 BTBD9 chr6 38256048 - CLPSL1 chr6 35754775 + Exonic hg19 BRCA TCGA-AN-A0FT-01A 2 2 Out-of-frame Intra-chr p21.2 p21.31 21209 ChimerSeq STARFusion TCGA_RNA-Seq PTPRT-ELF3 PTPRT chr20 41306506 - ELF3 chr1 201982957 + Exonic hg19 BRCA TCGA-AN-A0FT-01A 2 2 In-Frame Inter-chr q13.11 Oncogene Tumor suppressor gene q32.1 Transcription factor 21210 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-ZAN ERBB2 chr17 37866734 + ZAN chr7 100392818 + Exonic hg19 BRCA TCGA-OL-A5RY-01A 3 56 In-Frame Inter-chr q12 Oncogene q22.1 Seq+ 21211 ChimerSeq STARFusion TCGA_RNA-Seq ACO1-TYRP1 ACO1 chr9 32384733 + TYRP1 chr9 12693912 + Exonic hg19 BRCA TCGA-OL-A5RY-01A 8 12 5'UTR-5'UTR Intra-chr p21.1 p23 Seq+ 21212 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB2-IGKC DNAJB2 chr2 220151425 + IGKC chr2 89156807 - Exonic hg19 BRCA TCGA-OL-A5RY-01A 6 1 Out-of-frame Intra-chr q35 p11.2 21213 ChimerSeq STARFusion TCGA_RNA-Seq THOC7-LRIG1 THOC7 chr3 63849448 - LRIG1 chr3 66512933 - Exonic hg19 BRCA TCGA-AC-A3OD-01B 5 2 Out-of-frame Intra-chr p14.1 Tumor suppressor gene Seq+ 21214 ChimerSeq STARFusion TCGA_RNA-Seq MKL2-BCAR4 MKL2 chr16 14173211 + BCAR4 chr16 11914154 - Exonic hg19 BRCA TCGA-AO-A0JL-01A 80 248 5'UTR-3'UTR Intra-chr p13.12 p13.13 Seq+ 21215 ChimerSeq STARFusion TCGA_RNA-Seq MKL2-BCAR4 MKL2 chr16 14173211 + BCAR4 chr16 11914155 - Exonic hg19 BRCA TCGA-AO-A0JL-01A 11 248 5'UTR-3'UTR Intra-chr p13.12 p13.13 Seq+ 21216 ChimerSeq STARFusion TCGA_RNA-Seq TEKT5-RMI2 TEKT5 chr16 10775850 - RMI2 chr16 11444499 + Exonic hg19 BRCA TCGA-AO-A0JL-01A 8 11 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 21217 ChimerSeq STARFusion TCGA_RNA-Seq MKL2-CLEC16A MKL2 chr16 14173211 + CLEC16A chr16 11096931 + Exonic hg19 BRCA TCGA-AO-A0JL-01A 3 3 5'UTR-CDS Intra-chr p13.12 p13.13 Seq+ 21218 ChimerSeq STARFusion TCGA_RNA-Seq CLEC16A-LITAF CLEC16A chr16 11220003 + LITAF chr16 11650591 - Exonic hg19 BRCA TCGA-AO-A0JL-01A 2 5 CDS-5'UTR Intra-chr p13.13 p13.13 Tumor suppressor gene Seq+ 21219 ChimerSeq STARFusion TCGA_RNA-Seq MRPL11-ST8SIA1 MRPL11 chr11 66204575 - ST8SIA1 chr12 22402032 - Exonic hg19 BRCA TCGA-B6-A0I2-01A 8 26 In-Frame Inter-chr q13.2 p12.1 Seq+ 21220 ChimerSeq STARFusion TCGA_RNA-Seq CCDC41-LIN7A CCDC41 chr12 94853333 - LIN7A chr12 81205462 - Exonic hg19 BRCA TCGA-A2-A0CZ-01A 4 18 5'UTR-CDS Intra-chr q21.31 Seq+ 21221 ChimerSeq STARFusion TCGA_RNA-Seq WDR6-LINC00534 WDR6 chr3 49044964 + LINC00534 chr8 91399795 + Exonic hg19 BRCA TCGA-A2-A0CZ-01A 4 5 Out-of-frame Inter-chr p21.31 q21.3 21222 ChimerSeq STARFusion TCGA_RNA-Seq CUL5-RAB39A CUL5 chr11 107925682 + RAB39A chr11 107832672 + Exonic hg19 BRCA TCGA-A2-A0CZ-01A 2 5 Out-of-frame Intra-chr q22.3 Tumor suppressor gene q22.3 21223 ChimerSeq STARFusion TCGA_RNA-Seq WDR70-ADAMTS12 WDR70 chr5 37605340 + ADAMTS12 chr5 33751653 - Exonic hg19 BRCA TCGA-A2-A0SY-01A 6 19 In-Frame Intra-chr p13.2 p13.2 Seq+ 21224 ChimerSeq STARFusion TCGA_RNA-Seq CA10-TTC25 CA10 chr17 50008350 - TTC25 chr17 40101390 + Exonic hg19 BRCA TCGA-A2-A0SY-01A 4 1 Out-of-frame Intra-chr q22 q21.2 Seq+ 21225 ChimerSeq STARFusion TCGA_RNA-Seq AVL9-BBS9 AVL9 chr7 32535414 + BBS9 chr7 33644477 + Exonic hg19 BRCA TCGA-A2-A0SY-01A 2 1 Out-of-frame Intra-chr p14.3 p14.3 Seq+ 21226 ChimerSeq STARFusion TCGA_RNA-Seq PI4KA-RANGAP1 PI4KA chr22 21178614 - RANGAP1 chr22 41677086 - Exonic hg19 BRCA TCGA-A2-A0SY-01A 2 0 CDS-5'UTR Intra-chr q11.21 q13.2 21227 ChimerSeq STARFusion TCGA_RNA-Seq SNAI1-SLC9A8 SNAI1 chr20 48599678 + SLC9A8 chr20 48479466 + Exonic hg19 BRCA TCGA-OL-A5D6-01A 16 167 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 Seq+ 21228 ChimerSeq STARFusion TCGA_RNA-Seq SNAI1-SLC9A8 SNAI1 chr20 48599678 + SLC9A8 chr20 48481265 + Exonic hg19 BRCA TCGA-OL-A5D6-01A 9 166 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 Seq+ 21229 ChimerSeq STARFusion TCGA_RNA-Seq SNAI1-SLC9A8 SNAI1 chr20 48599678 + SLC9A8 chr20 48479471 + Exonic hg19 BRCA TCGA-OL-A5D6-01A 5 166 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 Seq+ 21230 ChimerSeq STARFusion TCGA_RNA-Seq PLEC-BOP1 PLEC chr8 145049345 - BOP1 chr8 145488131 - Exonic hg19 BRCA TCGA-OL-A5D6-01A 9 61 Out-of-frame Intra-chr q24.3 q24.3 21231 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R4-FAM73B PPP2R4 chr9 131901928 + FAM73B chr9 131831355 + Exonic hg19 BRCA TCGA-OL-A5D6-01A 4 52 Out-of-frame Intra-chr Tumor suppressor gene Seq+ 21232 ChimerSeq STARFusion TCGA_RNA-Seq ACER3-NARS2 ACER3 chr11 76572123 + NARS2 chr11 78180359 - Exonic hg19 BRCA TCGA-AN-A0G0-01A 97 291 Out-of-frame Intra-chr q13.5 q14.1 Seq+ 21233 ChimerSeq STARFusion TCGA_RNA-Seq ACER3-NARS2 ACER3 chr11 76572123 + NARS2 chr11 78177059 - Exonic hg19 BRCA TCGA-AN-A0G0-01A 20 291 Out-of-frame Intra-chr q13.5 q14.1 Seq+ 21234 ChimerSeq STARFusion TCGA_RNA-Seq ACTN2-CHRM3 ACTN2 chr1 236850099 + CHRM3 chr1 239795524 + Exonic hg19 BRCA TCGA-AN-A0G0-01A 14 107 5'UTR-5'UTR Intra-chr q43 q43 Seq+ 21235 ChimerSeq STARFusion TCGA_RNA-Seq ACTN2-CHRM3 ACTN2 chr1 236850099 + CHRM3 chr1 239841486 + Exonic hg19 BRCA TCGA-AN-A0G0-01A 6 107 5'UTR-5'UTR Intra-chr q43 q43 Seq+ 21236 ChimerSeq STARFusion TCGA_RNA-Seq NFIX-CALR NFIX chr19 13189549 + CALR chr19 13055026 + Exonic hg19 BRCA TCGA-AN-A0G0-01A 7 76 CDS-3'UTR Intra-chr p13.13 Transcription factor p13.13 Seq+ 21237 ChimerSeq STARFusion TCGA_RNA-Seq PRDM16-NARS2 PRDM16 chr1 2985860 + NARS2 chr11 78282489 - Exonic hg19 BRCA TCGA-AN-A0G0-01A 2 10 Out-of-frame Inter-chr p36.32 Transcription factor q14.1 Seq+ 21238 ChimerSeq STARFusion TCGA_RNA-Seq BOP1-EEF1D BOP1 chr8 145500212 - EEF1D chr8 144663498 - Exonic hg19 BRCA TCGA-AN-A0G0-01A 2 1 In-Frame Intra-chr q24.3 21239 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC24-C2CD3 ZDHHC24 chr11 66311175 - C2CD3 chr11 73768589 - Exonic hg19 BRCA TCGA-D8-A1JC-01A 7 46 In-Frame Intra-chr q13.2 q13.4 Seq+ 21240 ChimerSeq STARFusion TCGA_RNA-Seq ADK-KAT6B ADK chr10 76074503 + KAT6B chr10 76719728 + Exonic hg19 BRCA TCGA-D8-A1JC-01A 7 41 In-Frame Intra-chr q22.2 Oncogene Seq+ 21241 ChimerSeq STARFusion TCGA_RNA-Seq ABL1-NUP214 ABL1 chr9 133589842 + NUP214 chr9 134007983 + Exonic hg19 BRCA TCGA-D8-A1JC-01A 10 12 Out-of-frame Intra-chr q34.12 TK:Abl Oncogene q34.13 Oncogene Pub Seq+ 21242 ChimerSeq STARFusion TCGA_RNA-Seq ERLIN2-FGFR1 ERLIN2 chr8 37607370 + FGFR1 chr8 38315052 - Exonic hg19 BRCA TCGA-D8-A1JC-01A 3 16 In-Frame Intra-chr p11.23 p11.23 TK:FGFR Oncogene Seq+ 21243 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-MAP6 UVRAG chr11 75526569 + MAP6 chr11 75319367 - Exonic hg19 BRCA TCGA-D8-A1JC-01A 4 5 Out-of-frame Intra-chr q13.5 Tumor suppressor gene q13.5 Seq+ 21244 ChimerSeq STARFusion TCGA_RNA-Seq CSNK2A1-HAGH CSNK2A1 chr20 480477 - HAGH chr16 1859834 - Exonic hg19 BRCA TCGA-D8-A1JC-01A 2 2 In-Frame Inter-chr p13 Oncogene p13.3 21245 ChimerSeq STARFusion TCGA_RNA-Seq UBE2Z-UTP18 UBE2Z chr17 47000299 + UTP18 chr17 49371264 + Exonic hg19 BRCA TCGA-EW-A6SC-01A 15 133 In-Frame Intra-chr q21.32 q21.33 Seq+ 21246 ChimerSeq STARFusion TCGA_RNA-Seq CLMN-EVL CLMN chr14 95786048 - EVL chr14 100551024 + Exonic hg19 BRCA TCGA-EW-A6SC-01A 25 85 Out-of-frame Intra-chr q32.13 q32.2 Seq+ 21247 ChimerSeq STARFusion TCGA_RNA-Seq UBE2Z-UTP18 UBE2Z chr17 47004737 + UTP18 chr17 49371264 + Exonic hg19 BRCA TCGA-EW-A6SC-01A 3 133 3'UTR-CDS Intra-chr q21.32 q21.33 Seq+ 21248 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-SHANK2 FCHSD2 chr11 72632873 - SHANK2 chr11 70319544 - Exonic hg19 BRCA TCGA-EW-A6SC-01A 15 54 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 21249 ChimerSeq STARFusion TCGA_RNA-Seq RNF169-CALCOCO2 RNF169 chr11 74528759 + CALCOCO2 chr17 46919060 + Exonic hg19 BRCA TCGA-EW-A6SC-01A 7 68 CDS-5'UTR Inter-chr q13.4 q21.32 Seq+ 21250 ChimerSeq STARFusion TCGA_RNA-Seq CALCOCO2-RCOR2 CALCOCO2 chr17 46908440 + RCOR2 chr11 63684033 - Exonic hg19 BRCA TCGA-EW-A6SC-01A 12 2 5'UTR-5'UTR Inter-chr q21.32 q13.1 Seq+ 21251 ChimerSeq STARFusion TCGA_RNA-Seq LPCAT3-MYO15A LPCAT3 chr12 7090166 - MYO15A chr17 18039025 + Exonic hg19 BRCA TCGA-EW-A6SC-01A 2 4 Out-of-frame Inter-chr p13.31 p11.2 Seq+ 21252 ChimerSeq STARFusion TCGA_RNA-Seq PI4KB-SELENBP1 PI4KB chr1 151298648 - SELENBP1 chr1 151342245 - Exonic hg19 BRCA TCGA-A8-A07C-01A 7 72 Out-of-frame Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 21253 ChimerSeq STARFusion TCGA_RNA-Seq PI4KB-SELENBP1 PI4KB chr1 151297221 - SELENBP1 chr1 151342245 - Exonic hg19 BRCA TCGA-A8-A07C-01A 6 72 5'UTR-CDS Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 21254 ChimerSeq STARFusion TCGA_RNA-Seq PI4KB-SELENBP1 PI4KB chr1 151297221 - SELENBP1 chr1 151345174 - Exonic hg19 BRCA TCGA-A8-A07C-01A 4 72 5'UTR-5'UTR Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 21255 ChimerSeq STARFusion TCGA_RNA-Seq MLL3-AUTS2 MLL3 chr7 152132711 - AUTS2 chr7 69900738 + Exonic hg19 BRCA TCGA-A8-A07C-01A 5 66 Out-of-frame Intra-chr Tumor suppressor gene q11.22 Seq+ 21256 ChimerSeq STARFusion TCGA_RNA-Seq PI4KB-SELENBP1 PI4KB chr1 151298648 - SELENBP1 chr1 151345174 - Exonic hg19 BRCA TCGA-A8-A07C-01A 3 72 5'UTR-5'UTR Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 21257 ChimerSeq STARFusion TCGA_RNA-Seq FLNB-SLMAP FLNB chr3 57994583 + SLMAP chr3 57898108 + Exonic hg19 BRCA TCGA-A8-A07C-01A 10 38 In-Frame Intra-chr p14.3 p14.3 Seq+ 21258 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC6-CTIF ZDHHC6 chr10 114198094 - CTIF chr18 46343592 + Exonic hg19 BRCA TCGA-A8-A07C-01A 8 24 In-Frame Inter-chr q25.2 Seq+ 21259 ChimerSeq STARFusion TCGA_RNA-Seq FLNB-SLMAP FLNB chr3 57994583 + SLMAP chr3 57898885 + Exonic hg19 BRCA TCGA-A8-A07C-01A 2 38 In-Frame Intra-chr p14.3 p14.3 Seq+ 21260 ChimerSeq STARFusion TCGA_RNA-Seq XRN1-PIP4K2A XRN1 chr3 142166712 - PIP4K2A chr10 22898646 - Exonic hg19 BRCA TCGA-A8-A07C-01A 4 28 In-Frame Inter-chr q23 p12.2 Seq+ 21261 ChimerSeq STARFusion TCGA_RNA-Seq MTDH-CALB1 MTDH chr8 98735263 + CALB1 chr8 91094330 - Exonic hg19 BRCA TCGA-A8-A07C-01A 6 18 In-Frame Intra-chr q22.1 q21.3 Seq+ 21262 ChimerSeq STARFusion TCGA_RNA-Seq EHBP1-GAREML EHBP1 chr2 63223901 + GAREML chr2 26399213 + Exonic hg19 BRCA TCGA-A8-A07C-01A 5 19 Out-of-frame Intra-chr p15 21263 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R3A-TOPBP1 PPP2R3A chr3 135825164 + TOPBP1 chr3 133339191 - Exonic hg19 BRCA TCGA-A8-A07C-01A 4 22 Out-of-frame Intra-chr q22.2 q22.1 Seq+ 21264 ChimerSeq STARFusion TCGA_RNA-Seq TACC2-ATE1 TACC2 chr10 123892249 + ATE1 chr10 123629553 - Exonic hg19 BRCA TCGA-A8-A07C-01A 4 22 Out-of-frame Intra-chr q26.13 q26.13 Seq+ 21265 ChimerSeq STARFusion TCGA_RNA-Seq SETD5-SAMD12 SETD5 chr3 9516840 + SAMD12 chr8 119593132 - Exonic hg19 BRCA TCGA-A8-A07C-01A 4 19 Out-of-frame Inter-chr p25.3 q24.12 Seq+ 21266 ChimerSeq STARFusion TCGA_RNA-Seq TMEM182-SLC9A2 TMEM182 chr2 103380886 + SLC9A2 chr2 103274023 + Exonic hg19 BRCA TCGA-A8-A07C-01A 4 15 In-Frame Intra-chr q12.1 q12.1 Seq+ 21267 ChimerSeq STARFusion TCGA_RNA-Seq HEG1-SLC12A8 HEG1 chr3 124696703 - SLC12A8 chr3 124811042 - Exonic hg19 BRCA TCGA-A8-A07C-01A 3 12 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 21268 ChimerSeq STARFusion TCGA_RNA-Seq ZNF385D-GLB1 ZNF385D chr3 21792387 - GLB1 chr3 33087724 - Exonic hg19 BRCA TCGA-A8-A07C-01A 3 5 In-Frame Intra-chr p24.3 Transcription factor p22.3 Seq+ 21269 ChimerSeq STARFusion TCGA_RNA-Seq RYR2-GPR137B RYR2 chr1 237780786 + GPR137B chr1 236368426 + Exonic hg19 BRCA TCGA-A8-A07C-01A 2 6 5'UTR-CDS Intra-chr q43 q42.3 Seq+ 21270 ChimerSeq STARFusion TCGA_RNA-Seq FAM211A-PEMT FAM211A chr17 16395059 - PEMT chr17 17480341 - Exonic hg19 BRCA TCGA-AR-A2LJ-01A 72 139 In-Frame Intra-chr p11.2 Seq+ 21271 ChimerSeq STARFusion TCGA_RNA-Seq NCOR1-ACER3 NCOR1 chr17 15995177 - ACER3 chr11 76579164 + Exonic hg19 BRCA TCGA-AR-A2LJ-01A 2 39 Out-of-frame Inter-chr p11.2 Oncogene q13.5 Seq+ 21272 ChimerSeq STARFusion TCGA_RNA-Seq NCOR1-ACER3 NCOR1 chr17 15995177 - ACER3 chr11 76637601 + Exonic hg19 BRCA TCGA-AR-A2LJ-01A 2 39 In-Frame Inter-chr p11.2 Oncogene q13.5 Seq+ 21273 ChimerSeq STARFusion TCGA_RNA-Seq LINC00993-TACC1P1 LINC00993 chr10 37635757 + TACC1P1 chr10 37811939 + Exonic hg19 BRCA TCGA-AR-A2LJ-01A 7 16 Out-of-frame Intra-chr p11.21 p11.21 21274 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-KIRREL3 UVRAG chr11 75728024 + KIRREL3 chr11 126432807 - Exonic hg19 BRCA TCGA-AR-A2LJ-01A 2 19 Out-of-frame Intra-chr q13.5 Tumor suppressor gene q24.2 Seq+ 21275 ChimerSeq STARFusion TCGA_RNA-Seq ATP8A2P1-TACC1P1 ATP8A2P1 chr10 37635757 + TACC1P1 chr10 37811939 + Exonic hg19 BRCA TCGA-AR-A2LJ-01A 3 6 Out-of-frame Intra-chr p11.21 p11.21 21276 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-BEX1 RNA45S5 chrUn_gl000220 110197 + BEX1 chrX 102317987 - Exonic hg19 BRCA TCGA-A7-A13F-01A 3 1 Out-of-frame Inter-chr q22.1 Tumor suppressor gene 21277 ChimerSeq STARFusion TCGA_RNA-Seq CENPV-GNAS CENPV chr17 16253245 - GNAS chr20 57478586 + Exonic hg19 BRCA TCGA-A7-A13F-01A 2 0 In-Frame Inter-chr p11.2 q13.32 Oncogene 21278 ChimerSeq STARFusion TCGA_RNA-Seq MAGED2-TRO MAGED2 chrX 54839457 + TRO chrX 54953016 + Exonic hg19 BRCA TCGA-A7-A13F-01A 2 0 In-Frame Intra-chr p11.21 p11.21 21279 ChimerSeq STARFusion TCGA_RNA-Seq ZFP64-TSHZ2 ZFP64 chr20 50704931 - TSHZ2 chr20 51870038 + Exonic hg19 BRCA TCGA-A7-A13F-01A 2 0 In-Frame Intra-chr q13.2 Transcription factor q13.2 Transcription factor 21280 ChimerSeq STARFusion TCGA_RNA-Seq B2M-PKM B2M chr15 45008554 + PKM chr15 72499618 - Exonic hg19 BRCA TCGA-A8-A0A1-01A 2 2 Out-of-frame Intra-chr Oncogene q23 21281 ChimerSeq STARFusion TCGA_RNA-Seq ITPK1-MATR3 ITPK1 chr14 93483021 - MATR3 chr5 138650364 + Exonic hg19 BRCA TCGA-A8-A0A1-01A 2 0 In-Frame Inter-chr q31.2 21282 ChimerSeq STARFusion TCGA_RNA-Seq AP2A1-DHDH AP2A1 chr19 50270457 + DHDH chr19 49442706 + Exonic hg19 BRCA TCGA-A2-A25D-01A 152 228 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 21283 ChimerSeq STARFusion TCGA_RNA-Seq ITFG1-NETO2 ITFG1 chr16 47409787 - NETO2 chr16 47117712 - Exonic hg19 BRCA TCGA-A2-A25D-01A 5 42 Out-of-frame Intra-chr q12.1 q12.1 21284 ChimerSeq STARFusion TCGA_RNA-Seq MTCH2-FNBP4 MTCH2 chr11 47660251 - FNBP4 chr11 47741638 - Exonic hg19 BRCA TCGA-A2-A25D-01A 7 31 In-Frame Intra-chr p11.2 p11.2 Seq+ 21285 ChimerSeq STARFusion TCGA_RNA-Seq ITFG1-NETO2 ITFG1 chr16 47409787 - NETO2 chr16 47120250 - Exonic hg19 BRCA TCGA-A2-A25D-01A 2 42 Out-of-frame Intra-chr q12.1 q12.1 21286 ChimerSeq STARFusion TCGA_RNA-Seq EXOSC1-SORCS1 EXOSC1 chr10 99196948 - SORCS1 chr10 108333939 - Exonic hg19 BRCA TCGA-A2-A25D-01A 5 24 CDS-3'UTR Intra-chr q24.1 q25.1 Seq+ 21287 ChimerSeq STARFusion TCGA_RNA-Seq KAT6A-ANK1 KAT6A chr8 41905896 - ANK1 chr8 41615655 - Exonic hg19 BRCA TCGA-A2-A25D-01A 4 11 In-Frame Intra-chr p11.21 Oncogene p11.21 Seq+ 21288 ChimerSeq STARFusion TCGA_RNA-Seq STAT3-FAM134C STAT3 chr17 40490751 - FAM134C chr17 40739884 - Exonic hg19 BRCA TCGA-A2-A25D-01A 4 7 Out-of-frame Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 21289 ChimerSeq STARFusion TCGA_RNA-Seq KCNMA1-MSMB KCNMA1 chr10 78869931 - MSMB chr10 51555731 + Exonic hg19 BRCA TCGA-A2-A25D-01A 4 4 In-Frame Intra-chr q22.3 q11.22 Tumor suppressor gene Seq+ 21290 ChimerSeq STARFusion TCGA_RNA-Seq ADCY5-PTPLB ADCY5 chr3 123166259 - PTPLB chr3 123221528 - Exonic hg19 BRCA TCGA-A2-A25D-01A 2 9 In-Frame Intra-chr q21.1 Seq+ 21291 ChimerSeq STARFusion TCGA_RNA-Seq GPATCH3-FAM46B GPATCH3 chr1 27223792 - FAM46B chr1 27333448 - Exonic hg19 BRCA TCGA-A2-A25D-01A 4 1 In-Frame Intra-chr p36.11 p36.11 21292 ChimerSeq STARFusion TCGA_RNA-Seq MCM9-FAM184A MCM9 chr6 119256056 - FAM184A chr6 119281349 - Exonic hg19 BRCA TCGA-A2-A25D-01A 2 7 5'UTR-CDS Intra-chr q22.31 Tumor suppressor gene q22.31 Seq+ 21293 ChimerSeq STARFusion TCGA_RNA-Seq STAT3-FAM134C STAT3 chr17 40490749 - FAM134C chr17 40739882 - Exonic hg19 BRCA TCGA-A2-A25D-01A 2 7 In-Frame Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 21294 ChimerSeq STARFusion TCGA_RNA-Seq SIX1-C14orf39 SIX1 chr14 61115348 - C14orf39 chr14 60938457 - Exonic hg19 BRCA TCGA-A2-A25D-01A 2 2 In-Frame Intra-chr q23.1 Transcription factor q23.1 21295 ChimerSeq STARFusion TCGA_RNA-Seq CLASRP-MAP4K1 CLASRP chr19 45543569 + MAP4K1 chr19 39083977 - Exonic hg19 BRCA TCGA-A2-A25D-01A 2 0 In-Frame Intra-chr q13.32 Tumor suppressor gene 21296 ChimerSeq STARFusion TCGA_RNA-Seq TTC27-TFPI TTC27 chr2 33012216 + TFPI chr2 188353102 - Exonic hg19 BRCA TCGA-A2-A25D-01A 2 0 Out-of-frame Intra-chr p22.3 q32.1 21297 ChimerSeq STARFusion TCGA_RNA-Seq THSD4-LRRC49 THSD4 chr15 71447271 + LRRC49 chr15 71272440 + Exonic hg19 BRCA TCGA-EW-A2FS-01A 19 87 In-Frame Intra-chr q23 q23 Seq+ 21298 ChimerSeq STARFusion TCGA_RNA-Seq THSD4-LRRC49 THSD4 chr15 71447271 + LRRC49 chr15 71276433 + Exonic hg19 BRCA TCGA-EW-A2FS-01A 4 87 In-Frame Intra-chr q23 q23 Seq+ 21299 ChimerSeq STARFusion TCGA_RNA-Seq THSD4-LRRC49 THSD4 chr15 71447271 + LRRC49 chr15 71300718 + Exonic hg19 BRCA TCGA-EW-A2FS-01A 4 87 Out-of-frame Intra-chr q23 q23 Seq+ 21300 ChimerSeq STARFusion TCGA_RNA-Seq EXOC7-USP22 EXOC7 chr17 74097352 - USP22 chr17 20911309 - Exonic hg19 BRCA TCGA-EW-A2FS-01A 5 5 Out-of-frame Intra-chr q25.1 p11.2 Seq+ 21301 ChimerSeq STARFusion TCGA_RNA-Seq BAX-DHDH BAX chr19 49459590 + DHDH chr19 49438257 + Exonic hg19 BRCA TCGA-EW-A2FS-01A 2 13 In-Frame Intra-chr q13.33 Tumor suppressor gene q13.33 Seq+ 21302 ChimerSeq STARFusion TCGA_RNA-Seq SHANK2-ARHGEF17 SHANK2 chr11 70544793 - ARHGEF17 chr11 73057928 + Exonic hg19 BRCA TCGA-EW-A2FS-01A 3 8 In-Frame Intra-chr q13.4 q13.4 Seq+ 21303 ChimerSeq STARFusion TCGA_RNA-Seq YPEL2-B4GALNT2 YPEL2 chr17 57430887 + B4GALNT2 chr17 47230162 + Exonic hg19 BRCA TCGA-EW-A2FS-01A 2 2 Out-of-frame Intra-chr q22 q21.32 Seq+ 21304 ChimerSeq STARFusion TCGA_RNA-Seq PRPSAP1-TANC2 PRPSAP1 chr17 74340752 - TANC2 chr17 61151304 + Exonic hg19 BRCA TCGA-EW-A2FS-01A 2 1 Out-of-frame Intra-chr q25.1 q23.2 21305 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-CBLB PPFIA1 chr11 70208594 + CBLB chr3 105459475 - Exonic hg19 BRCA TCGA-AQ-A04H-01B 35 110 Out-of-frame Inter-chr q13.3 q13.11 Seq+ 21306 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-RNF213 RPS6KB1 chr17 57971285 + RNF213 chr17 78345674 + Exonic hg19 BRCA TCGA-AQ-A04H-01B 18 68 Out-of-frame Intra-chr q23.1 Oncogene q25.3 Oncogene Seq+ 21307 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-RNF213 RPS6KB1 chr17 57970686 + RNF213 chr17 78345674 + Exonic hg19 BRCA TCGA-AQ-A04H-01B 17 68 Out-of-frame Intra-chr q23.1 Oncogene q25.3 Oncogene Seq+ 21308 ChimerSeq STARFusion TCGA_RNA-Seq PTRH2-PEX5L PTRH2 chr17 57784732 - PEX5L chr3 179576945 - Exonic hg19 BRCA TCGA-AQ-A04H-01B 4 6 5'UTR-CDS Inter-chr q23.1 q26.33 Seq+ 21309 ChimerSeq STARFusion TCGA_RNA-Seq ACVR2A-MBD5 ACVR2A chr2 148657467 + MBD5 chr2 148936269 + Exonic hg19 BRCA TCGA-AQ-A04H-01B 3 9 CDS-5'UTR Intra-chr q22.3 Oncogene q23.1 Seq+ 21310 ChimerSeq STARFusion TCGA_RNA-Seq RAC3-ABCA8 RAC3 chr17 79989672 + ABCA8 chr17 66865920 - Exonic hg19 BRCA TCGA-AQ-A04H-01B 2 10 In-Frame Intra-chr q25.3 q24.2 Seq+ 21311 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2B-NUP214 PRRC2B chr9 134340465 + NUP214 chr9 134050847 + Exonic hg19 BRCA TCGA-A8-A09N-01A 36 171 In-Frame Intra-chr q34.13 q34.13 Oncogene Seq+ 21312 ChimerSeq STARFusion TCGA_RNA-Seq PRCP-DLG2 PRCP chr11 82611277 - DLG2 chr11 83497835 - Exonic hg19 BRCA TCGA-A8-A09N-01A 3 62 In-Frame Intra-chr q14.1 q14.1 Seq+ 21313 ChimerSeq STARFusion TCGA_RNA-Seq NELFA-POLN NELFA chr4 2010477 - POLN chr4 2210214 - Exonic hg19 BRCA TCGA-A8-A09N-01A 5 39 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 21314 ChimerSeq STARFusion TCGA_RNA-Seq ITSN1-IFNGR2 ITSN1 chr21 35015019 + IFNGR2 chr21 34804484 + Exonic hg19 BRCA TCGA-A8-A09N-01A 4 8 5'UTR-CDS Intra-chr q22.11 21315 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H3-YY1 ZC3H3 chr8 144557568 - YY1 chr14 100728641 + Exonic hg19 BRCA TCGA-A8-A09N-01A 2 12 In-Frame Inter-chr q32.2 Transcription factor Seq+ 21316 ChimerSeq STARFusion TCGA_RNA-Seq LARP7-ALPK1 LARP7 chr4 113558759 + ALPK1 chr4 113332983 + Exonic hg19 BRCA TCGA-A8-A09N-01A 3 2 5'UTR-CDS Intra-chr q25 q25 Seq+ 21317 ChimerSeq STARFusion TCGA_RNA-Seq FAM35A-BMPR1A FAM35A chr10 88912636 + BMPR1A chr10 88649819 + Exonic hg19 BRCA TCGA-A8-A09N-01A 2 5 In-Frame Intra-chr q23.2 q23.2 TKL:STKR Oncogene Tumor suppressor gene Seq+ 21318 ChimerSeq STARFusion TCGA_RNA-Seq CPQ-SDC2 CPQ chr8 98041722 + SDC2 chr8 97621613 + Exonic hg19 BRCA TCGA-A8-A09N-01A 2 1 Out-of-frame Intra-chr q22.1 q22.1 21319 ChimerSeq STARFusion TCGA_RNA-Seq SDCCAG8-NONO SDCCAG8 chr1 243419542 + NONO chrX 70518319 + Exonic hg19 BRCA TCGA-A8-A09N-01A 2 0 Out-of-frame Inter-chr q13.1 21320 ChimerSeq STARFusion TCGA_RNA-Seq SH3GL1-ANKRD24 SH3GL1 chr19 4400321 - ANKRD24 chr19 4219588 + Exonic hg19 BRCA TCGA-GM-A2DC-01A 15 30 In-Frame Intra-chr p13.3 p13.3 Seq+ 21321 ChimerSeq STARFusion TCGA_RNA-Seq MSRB2-C10orf112 MSRB2 chr10 23399247 + C10orf112 chr10 19981211 + Exonic hg19 BRCA TCGA-GM-A2DC-01A 4 10 Out-of-frame Intra-chr p12.2 Seq+ 21322 ChimerSeq STARFusion TCGA_RNA-Seq MARK2-GLYATL2 MARK2 chr11 63607032 + GLYATL2 chr11 58611997 - Exonic hg19 BRCA TCGA-A2-A1G4-01A 146 484 CDS-5'UTR Intra-chr q13.1 CAMK:CAMKL q12.1 Seq+ 21323 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-MARK2 PPFIA1 chr11 70118542 + MARK2 chr11 63662631 + Exonic hg19 BRCA TCGA-A2-A1G4-01A 34 82 In-Frame Intra-chr q13.3 q13.1 CAMK:CAMKL Seq+ 21324 ChimerSeq STARFusion TCGA_RNA-Seq RNF121-VPS37C RNF121 chr11 71671937 + VPS37C chr11 60901679 - Exonic hg19 BRCA TCGA-A2-A1G4-01A 25 57 In-Frame Intra-chr q13.4 q12.2 Seq+ 21325 ChimerSeq STARFusion TCGA_RNA-Seq BAG6-LY6G5C BAG6 chr6_dbb_hap3 2902029 - LY6G5C chr6_dbb_hap3 2930477 - Exonic hg19 BRCA TCGA-AN-A0AL-01A 82 250 Out-of-frame Intra-chr p21.33 Seq+ 21326 ChimerSeq STARFusion TCGA_RNA-Seq BAG6-LY6G5C BAG6 chr6_mcf_hap5 2996128 - LY6G5C chr6_mcf_hap5 3024577 - Exonic hg19 BRCA TCGA-AN-A0AL-01A 63 175 Out-of-frame Intra-chr p21.33 Seq+ 21327 ChimerSeq STARFusion TCGA_RNA-Seq BAG6-LY6G5C BAG6 chr6_ssto_hap7 2947259 - LY6G5C chr6_ssto_hap7 2975702 - Exonic hg19 BRCA TCGA-AN-A0AL-01A 17 147 Out-of-frame Intra-chr p21.33 Seq+ 21328 ChimerSeq STARFusion TCGA_RNA-Seq TRMU-TTC38 TRMU chr22 46739265 + TTC38 chr22 46688100 + Exonic hg19 BRCA TCGA-AN-A0AL-01A 5 72 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 21329 ChimerSeq STARFusion TCGA_RNA-Seq TRMU-TTC38 TRMU chr22 46733841 + TTC38 chr22 46688688 + Exonic hg19 BRCA TCGA-AN-A0AL-01A 5 72 In-Frame Intra-chr q13.31 q13.31 Seq+ 21330 ChimerSeq STARFusion TCGA_RNA-Seq TRMU-TTC38 TRMU chr22 46739265 + TTC38 chr22 46688688 + Exonic hg19 BRCA TCGA-AN-A0AL-01A 3 72 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 21331 ChimerSeq STARFusion TCGA_RNA-Seq BAG6-LY6G5C BAG6 chr6_qbl_hap6 2910094 - LY6G5C chr6_qbl_hap6 2938540 - Exonic hg19 BRCA TCGA-AN-A0AL-01A 13 27 Out-of-frame Intra-chr p21.33 Seq+ 21332 ChimerSeq STARFusion TCGA_RNA-Seq SNRPA1-PCSK6 SNRPA1 chr15 101832167 - PCSK6 chr15 101847530 - Exonic hg19 BRCA TCGA-AN-A0AL-01A 5 34 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 21333 ChimerSeq STARFusion TCGA_RNA-Seq SNRPA1-PCSK6 SNRPA1 chr15 101835302 - PCSK6 chr15 101847530 - Exonic hg19 BRCA TCGA-AN-A0AL-01A 2 34 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 21334 ChimerSeq STARFusion TCGA_RNA-Seq TTLL7-MCOLN2 TTLL7 chr1 84369762 - MCOLN2 chr1 85403765 - Exonic hg19 BRCA TCGA-AN-A0AL-01A 6 14 In-Frame Intra-chr p31.1 p22.3 Seq+ 21335 ChimerSeq STARFusion TCGA_RNA-Seq MLLT10-NAV1 MLLT10 chr10 21906136 + NAV1 chr1 201790755 + Exonic hg19 BRCA TCGA-AN-A0AL-01A 3 25 CDS-3'UTR Inter-chr p12.31 Oncogene q32.1 Seq+ 21336 ChimerSeq STARFusion TCGA_RNA-Seq SNRPA1-LOC100507472 SNRPA1 chr15 101832167 - LOC100507472 chr15 101847530 - Exonic hg19 BRCA TCGA-AN-A0AL-01A 5 15 CDS-3'UTR Intra-chr q26.3 21337 ChimerSeq STARFusion TCGA_RNA-Seq FBXL18-ACTB FBXL18 chr7 5545043 - ACTB chr7 5569294 - Exonic hg19 BRCA TCGA-AN-A0AL-01A 3 10 CDS-3'UTR Intra-chr p22.1 p22.1 Seq+ 21338 ChimerSeq STARFusion TCGA_RNA-Seq GPR107-VPS13A GPR107 chr9 132854660 + VPS13A chr9 79946926 + Exonic hg19 BRCA TCGA-AN-A0AL-01A 4 6 Out-of-frame Intra-chr q34.11 q21.2 Seq+ 21339 ChimerSeq STARFusion TCGA_RNA-Seq TRMT11-ICK TRMT11 chr6 126307768 + ICK chr6 52884157 - Exonic hg19 BRCA TCGA-AN-A0AL-01A 2 6 Out-of-frame Intra-chr q22.32 p12.1 CMGC:RCK Oncogene Seq+ 21340 ChimerSeq STARFusion TCGA_RNA-Seq PDHX-CAT PDHX chr11 34982065 + CAT chr11 34492505 + Exonic hg19 BRCA TCGA-AN-A0AL-01A 2 4 Out-of-frame Intra-chr p13 p13 Tumor suppressor gene Seq+ 21341 ChimerSeq STARFusion TCGA_RNA-Seq XPR1-TOR1AIP1 XPR1 chr1 180601406 + TOR1AIP1 chr1 179853827 + Exonic hg19 BRCA TCGA-AN-A0AL-01A 2 1 Out-of-frame Intra-chr q25.3 q25.2 21342 ChimerSeq STARFusion TCGA_RNA-Seq PRMT2-SLC41A2 PRMT2 chr21 48069651 + SLC41A2 chr12 105199115 - Exonic hg19 BRCA TCGA-AN-A0AL-01A 2 0 In-Frame Inter-chr q22.3 q23.3 21343 ChimerSeq STARFusion TCGA_RNA-Seq C17orf85-CAMKK1 C17orf85 chr17 3746380 - CAMKK1 chr17 3783728 - Exonic hg19 BRCA TCGA-LL-A5YP-01A 4 25 Out-of-frame Intra-chr p13.2 Seq+ 21344 ChimerSeq STARFusion TCGA_RNA-Seq MYO9A-HEXA MYO9A chr15 72410021 - HEXA chr15 72648958 - Exonic hg19 BRCA TCGA-LL-A5YP-01A 3 8 5'UTR-CDS Intra-chr q23 q23 Seq+ 21345 ChimerSeq STARFusion TCGA_RNA-Seq SUPT6H-UTP6 SUPT6H chr17 26989360 + UTP6 chr17 30202432 - Exonic hg19 BRCA TCGA-LL-A5YP-01A 2 5 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 21346 ChimerSeq STARFusion TCGA_RNA-Seq MGC39584-SH3BGR MGC39584 chr4_gl000193_random 88200 - SH3BGR chr21 40834301 + Exonic hg19 BRCA TCGA-LL-A5YP-01A 2 4 Out-of-frame Inter-chr q22.2 21347 ChimerSeq STARFusion TCGA_RNA-Seq HOOK3-RNF170 HOOK3 chr8 42761401 + RNF170 chr8 42743014 - Exonic hg19 BRCA TCGA-LL-A5YP-01A 2 3 CDS-5'UTR Intra-chr p11.21 Oncogene p11.21 21348 ChimerSeq STARFusion TCGA_RNA-Seq HOOK3-AGPAT6 HOOK3 chr8 42780772 + AGPAT6 chr8 41466935 + Exonic hg19 BRCA TCGA-AR-A1AX-01A 3 9 In-Frame Intra-chr p11.21 Oncogene 21349 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-DTNBP1 PTPN12 chr7 77166962 + DTNBP1 chr6 15533626 - Exonic hg19 BRCA TCGA-AR-A1AX-01A 2 0 Out-of-frame Inter-chr q11.23 Tumor suppressor gene p22.3 21350 ChimerSeq STARFusion TCGA_RNA-Seq WBP11-MGP WBP11 chr12 14946665 - MGP chr12 15038784 - Exonic hg19 BRCA TCGA-A2-A0D0-01A 22 312 CDS-5'UTR Intra-chr p12.3 p12.3 Seq+ 21351 ChimerSeq STARFusion TCGA_RNA-Seq WBP11-MGP WBP11 chr12 14946665 - MGP chr12 15037179 - Exonic hg19 BRCA TCGA-A2-A0D0-01A 11 312 In-Frame Intra-chr p12.3 p12.3 Seq+ 21352 ChimerSeq STARFusion TCGA_RNA-Seq TYK2-CDC37 TYK2 chr19 10488890 - CDC37 chr19 10504117 - Exonic hg19 BRCA TCGA-A2-A0D0-01A 12 123 Out-of-frame Intra-chr p13.2 TK:JakA p13.2 Seq+ 21353 ChimerSeq STARFusion TCGA_RNA-Seq TYK2-CDC37 TYK2 chr19 10490291 - CDC37 chr19 10504117 - Exonic hg19 BRCA TCGA-A2-A0D0-01A 7 123 5'UTR-CDS Intra-chr p13.2 TK:JakA p13.2 Seq+ 21354 ChimerSeq STARFusion TCGA_RNA-Seq TYK2-CDC37 TYK2 chr19 10488890 - CDC37 chr19 10504113 - Exonic hg19 BRCA TCGA-A2-A0D0-01A 4 123 Out-of-frame Intra-chr p13.2 TK:JakA p13.2 Seq+ 21355 ChimerSeq STARFusion TCGA_RNA-Seq CLASRP-RELB CLASRP chr19 45562622 + RELB chr19 45537502 + Exonic hg19 BRCA TCGA-A2-A0D0-01A 17 14 Out-of-frame Intra-chr q13.32 q13.32 Transcription factor Seq+ 21356 ChimerSeq STARFusion TCGA_RNA-Seq TMEM87B-MERTK TMEM87B chr2 112813333 + MERTK chr2 112751828 + Exonic hg19 BRCA TCGA-A2-A0D0-01A 12 19 In-Frame Intra-chr q13 q13 Seq+ 21357 ChimerSeq STARFusion TCGA_RNA-Seq SCARB2-STAU2 SCARB2 chr4 77116860 - STAU2 chr8 74495065 - Exonic hg19 BRCA TCGA-A2-A0D0-01A 6 31 Out-of-frame Inter-chr q21.1 q21.11 Seq+ 21358 ChimerSeq STARFusion TCGA_RNA-Seq RALGPS1-TYRP1 RALGPS1 chr9 129728230 + TYRP1 chr9 12693912 + Exonic hg19 BRCA TCGA-A2-A0D0-01A 6 13 CDS-5'UTR Intra-chr q33.3 p23 Seq+ 21359 ChimerSeq STARFusion TCGA_RNA-Seq VAMP7-TGFB2 VAMP7 chrX 155130251 + TGFB2 chr1 218578511 + Exonic hg19 BRCA TCGA-A2-A0D0-01A 6 1 5'UTR-CDS Inter-chr q28 q41 Seq+ 21360 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1755-HS6ST2 KIAA1755 chr20 36851940 - HS6ST2 chrX 131763121 - Exonic hg19 BRCA TCGA-A2-A0D0-01A 3 11 Out-of-frame Inter-chr q11.23 q26.2 Seq+ 21361 ChimerSeq STARFusion TCGA_RNA-Seq SPHK2-CGB8 SPHK2 chr19 49123810 + CGB8 chr19 49551939 - Exonic hg19 BRCA TCGA-A2-A0D0-01A 4 6 5'UTR-CDS Intra-chr q13.33 q13.33 21362 ChimerSeq STARFusion TCGA_RNA-Seq SPHK2-CGB7 SPHK2 chr19 49123810 + CGB7 chr19 49558265 - Exonic hg19 BRCA TCGA-A2-A0D0-01A 2 4 In-Frame Intra-chr q13.33 q13.33 Seq+ 21363 ChimerSeq STARFusion TCGA_RNA-Seq KSR2-P2RX4 KSR2 chr12 118198816 - P2RX4 chr12 121670217 + Exonic hg19 BRCA TCGA-A2-A0D0-01A 2 2 In-Frame Intra-chr q24.23 TKL:RAF q24.31 Seq+ 21364 ChimerSeq STARFusion TCGA_RNA-Seq RALGPS2-RASAL2 RALGPS2 chr1 178754742 + RASAL2 chr1 178252699 + Exonic hg19 BRCA TCGA-A2-A0D0-01A 2 2 Out-of-frame Intra-chr q25.2 q25.2 Tumor suppressor gene Seq+ 21365 ChimerSeq STARFusion TCGA_RNA-Seq EAF2-RGS9 EAF2 chr3 121554238 + RGS9 chr17 63221120 + Exonic hg19 BRCA TCGA-AO-A03L-01A 101 331 Out-of-frame Inter-chr q13.33 Tumor suppressor gene q24.1 Seq+ 21366 ChimerSeq STARFusion TCGA_RNA-Seq IQCB1-CACNG4 IQCB1 chr3 121553238 - CACNG4 chr17 65014305 + Exonic hg19 BRCA TCGA-AO-A03L-01A 42 197 5'UTR-CDS Inter-chr q13.33 q24.2 Seq+ 21367 ChimerSeq STARFusion TCGA_RNA-Seq ITGB5-PARP14 ITGB5 chr3 124487860 - PARP14 chr3 122427037 + Exonic hg19 BRCA TCGA-AO-A03L-01A 11 19 Out-of-frame Intra-chr q21.2 q21.1 Seq+ 21368 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL2-EDEM2 OSBPL2 chr20 60831277 + EDEM2 chr20 33730281 - Exonic hg19 BRCA TCGA-AO-A03L-01A 6 35 Out-of-frame Intra-chr q13.33 q11.22 Seq+ 21369 ChimerSeq STARFusion TCGA_RNA-Seq ZNF321P-ERGIC3 ZNF321P chr19 53445794 - ERGIC3 chr20 34130072 + Exonic hg19 BRCA TCGA-AO-A03L-01A 12 10 3'UTR-CDS Inter-chr q13.41 q11.22 Seq+ 21370 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL2-EDEM2 OSBPL2 chr20 60835181 + EDEM2 chr20 33734738 - Exonic hg19 BRCA TCGA-AO-A03L-01A 4 35 In-Frame Intra-chr q13.33 q11.22 Seq+ 21371 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-LOC645638 TANC2 chr17 61396451 + LOC645638 chr17 58162564 - Exonic hg19 BRCA TCGA-AO-A03L-01A 4 32 CDS-3'UTR Intra-chr q23.2 21372 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL2-EDEM2 OSBPL2 chr20 60835181 + EDEM2 chr20 33730281 - Exonic hg19 BRCA TCGA-AO-A03L-01A 3 35 Out-of-frame Intra-chr q13.33 q11.22 Seq+ 21373 ChimerSeq STARFusion TCGA_RNA-Seq CMSS1-TBKBP1 CMSS1 chr3 99536887 + TBKBP1 chr17 45773445 + Exonic hg19 BRCA TCGA-AO-A03L-01A 4 18 Out-of-frame Inter-chr q12.1 q21.32 Seq+ 21374 ChimerSeq STARFusion TCGA_RNA-Seq TPRG1-DGKG TPRG1 chr3 188933172 + DGKG chr3 185983095 - Exonic hg19 BRCA TCGA-AO-A03L-01A 4 4 Out-of-frame Intra-chr q28 q27.3 Seq+ 21375 ChimerSeq STARFusion TCGA_RNA-Seq MED13-VMP1 MED13 chr17 60028186 - VMP1 chr17 57915656 + Exonic hg19 BRCA TCGA-AO-A03L-01A 3 7 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 21376 ChimerSeq STARFusion TCGA_RNA-Seq UQCC-CACNA2D4 UQCC chr20 33954360 - CACNA2D4 chr12 1919753 - Exonic hg19 BRCA TCGA-AO-A03L-01A 2 9 Out-of-frame Inter-chr p13.33 Seq+ 21377 ChimerSeq STARFusion TCGA_RNA-Seq CACNA1H-COL1A2 CACNA1H chr16 1270089 + COL1A2 chr7 94024207 + Exonic hg19 BRCA TCGA-AO-A03L-01A 3 1 Out-of-frame Inter-chr p13.3 q21.3 21378 ChimerSeq STARFusion TCGA_RNA-Seq DHX35-TRMT10C DHX35 chr20 37650578 + TRMT10C chr3 101283614 + Exonic hg19 BRCA TCGA-AO-A03L-01A 3 0 Out-of-frame Inter-chr q11.23 q12.3 21379 ChimerSeq STARFusion TCGA_RNA-Seq COL1A2-PTPLAD1 COL1A2 chr7 94024413 + PTPLAD1 chr15 65822827 + Exonic hg19 BRCA TCGA-AO-A03L-01A 2 1 CDS-5'UTR Inter-chr q21.3 21380 ChimerSeq STARFusion TCGA_RNA-Seq NR2F2-GDI2 NR2F2 chr15 96869581 + GDI2 chr10 5842668 - Exonic hg19 BRCA TCGA-AO-A03L-01A 2 0 Out-of-frame Inter-chr q26.2 Transcription factor p15.1 21381 ChimerSeq STARFusion TCGA_RNA-Seq ATF1-HP1BP3 ATF1 chr12 51208222 + HP1BP3 chr1 21100103 - Exonic hg19 BRCA TCGA-A2-A0T5-01A 2 0 In-Frame Inter-chr q13.12 Oncogene Transcription factor p36.12 21382 ChimerSeq STARFusion TCGA_RNA-Seq TCF7L1-WIF1 TCF7L1 chr2 85361573 + WIF1 chr12 65471634 - Exonic hg19 BRCA TCGA-E2-A1LI-01A 49 177 In-Frame Inter-chr p11.2 Oncogene Transcription factor q14.3 Tumor suppressor gene Seq+ 21383 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57763169 + VMP1 chr17 57889031 + Exonic hg19 BRCA TCGA-E2-A1LI-01A 11 33 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 21384 ChimerSeq STARFusion TCGA_RNA-Seq MCCC1-MED10 MCCC1 chr3 182788787 - MED10 chr5 6372714 - Exonic hg19 BRCA TCGA-E2-A1LI-01A 7 45 Out-of-frame Inter-chr q27.1 p15.31 Seq+ 21385 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSD1 PRSS27 chr16 2763530 - TPSD1 chr16 1308333 + Exonic hg19 BRCA TCGA-E2-A1LI-01A 7 8 In-Frame Intra-chr p13.3 p13.3 21386 ChimerSeq STARFusion TCGA_RNA-Seq ATP2A3-FGF3 ATP2A3 chr17 3832622 - FGF3 chr11 69625468 - Exonic hg19 BRCA TCGA-A2-A0CT-01A 38 109 In-Frame Inter-chr p13.2 q13.3 Seq+ 21387 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-CCDC170 ESR1 chr6 152023140 + CCDC170 chr6 151857453 + Exonic hg19 BRCA TCGA-A2-A0CT-01A 8 21 5'UTR-CDS Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 KB Pub Seq+ 21388 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP44-DNAH2 ARHGAP44 chr17 12693208 + DNAH2 chr17 7704896 + Exonic hg19 BRCA TCGA-A2-A0CT-01A 2 12 In-Frame Intra-chr p12 p13.1 Seq+ 21389 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80963762 - MRPS28 chr8 80831383 - Exonic hg19 BRCA TCGA-A2-A0CT-01A 2 7 In-Frame Intra-chr q21.13 q21.13 21390 ChimerSeq STARFusion TCGA_RNA-Seq OXNAD1-LRRTM4 OXNAD1 chr3 16327955 + LRRTM4 chr2 76976042 - Exonic hg19 BRCA TCGA-AR-A0TZ-01A 16 38 Out-of-frame Inter-chr p25.1 p12 Seq+ 21391 ChimerSeq STARFusion TCGA_RNA-Seq PEMT-NEU3 PEMT chr17 17494845 - NEU3 chr11 74705554 + Exonic hg19 BRCA TCGA-AR-A0TZ-01A 3 13 Out-of-frame Inter-chr p11.2 q13.4 Seq+ 21392 ChimerSeq STARFusion TCGA_RNA-Seq IL6ST-SKIV2L2 IL6ST chr5 55251853 - SKIV2L2 chr5 54639159 + Exonic hg19 BRCA TCGA-AR-A0TZ-01A 2 1 In-Frame Intra-chr q11.2 Oncogene q11.2 21393 ChimerSeq STARFusion TCGA_RNA-Seq PCNXL3-FRMD8 PCNXL3 chr11 65388437 + FRMD8 chr11 65178713 + Exonic hg19 BRCA TCGA-BH-A0BC-01A 6 36 Out-of-frame Intra-chr q13.1 21394 ChimerSeq STARFusion TCGA_RNA-Seq DMC1-DNAL4 DMC1 chr22 38962595 - DNAL4 chr22 39177014 - Exonic hg19 BRCA TCGA-BH-A0BC-01A 2 11 In-Frame Intra-chr q13.1 q13.1 Seq+ 21395 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC1-COPB2 DNAJC1 chr10 22217435 - COPB2 chr3 139077113 - Exonic hg19 BRCA TCGA-BH-A0BC-01A 2 1 Out-of-frame Inter-chr p12.31 q23 21396 ChimerSeq STARFusion TCGA_RNA-Seq LOC100130987-SP1 LOC100130987 chr11 67088804 + SP1 chr12 53775443 + Exonic hg19 BRCA TCGA-BH-A0BC-01A 2 0 5'UTR-5'UTR Inter-chr q13.13 Transcription factor 21397 ChimerSeq STARFusion TCGA_RNA-Seq NCOA3-PRIM2 NCOA3 chr20 46212005 + PRIM2 chr6 57372288 + Exonic hg19 BRCA TCGA-E9-A1RH-01A 45 379 5'UTR-CDS Inter-chr q13.12 Transcription factor p11.2 Seq+ 21398 ChimerSeq STARFusion TCGA_RNA-Seq DDX5-ART1 DDX5 chr17 62499548 - ART1 chr11 3685525 + Exonic hg19 BRCA TCGA-E9-A1RH-01A 49 221 CDS-3'UTR Inter-chr q23.3 p15.4 Tumor suppressor gene Seq+ 21399 ChimerSeq STARFusion TCGA_RNA-Seq DDX5-ART1 DDX5 chr17 62499548 - ART1 chr11 3685322 + Exonic hg19 BRCA TCGA-E9-A1RH-01A 21 221 In-Frame Inter-chr q23.3 p15.4 Tumor suppressor gene Seq+ 21400 ChimerSeq STARFusion TCGA_RNA-Seq ARPC4-GRM7 ARPC4 chr3 9845697 + GRM7 chr3 7188139 + Exonic hg19 BRCA TCGA-E9-A1RH-01A 31 79 In-Frame Intra-chr p25.3 p26.1 Seq+ 21401 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT6-LOC100507412 AGPAT6 chr8 41435797 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-E9-A1RH-01A 36 52 5'UTR-5'UTR Inter-chr 21402 ChimerSeq STARFusion TCGA_RNA-Seq ADCY9-GLYR1 ADCY9 chr16 4038995 - GLYR1 chr16 4862249 - Exonic hg19 BRCA TCGA-E9-A1RH-01A 14 84 In-Frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 21403 ChimerSeq STARFusion TCGA_RNA-Seq ITGA6-ZAK ITGA6 chr2 173356251 + ZAK chr2 174034533 + Exonic hg19 BRCA TCGA-E9-A1RH-01A 14 32 In-Frame Intra-chr q31.1 TKL:MLK 21404 ChimerSeq STARFusion TCGA_RNA-Seq DEPTOR-ENPP2 DEPTOR chr8 120977650 + ENPP2 chr8 120577195 - Exonic hg19 BRCA TCGA-E9-A1RH-01A 11 38 In-Frame Intra-chr q24.12 q24.12 Seq+ 21405 ChimerSeq STARFusion TCGA_RNA-Seq ZMIZ1-CDPF1 ZMIZ1 chr10 80921890 + CDPF1 chr22 46641135 - Exonic hg19 BRCA TCGA-E9-A1RH-01A 8 50 Out-of-frame Inter-chr q22.3 q13.31 Seq+ 21406 ChimerSeq STARFusion TCGA_RNA-Seq LPP-TP63 LPP chr3 188059507 + TP63 chr3 189526061 + Exonic hg19 BRCA TCGA-E9-A1RH-01A 4 33 5'UTR-CDS Intra-chr q27.3 Oncogene q28 Tumor suppressor gene Transcription factor Seq+ 21407 ChimerSeq STARFusion TCGA_RNA-Seq MCU-NFIX MCU chr10 74452059 + NFIX chr19 13135835 + Exonic hg19 BRCA TCGA-E9-A1RH-01A 5 10 In-Frame Inter-chr q22.1 p13.13 Transcription factor Seq+ 21408 ChimerSeq STARFusion TCGA_RNA-Seq SMAD3-IQCH SMAD3 chr15 67358698 + IQCH chr15 67636401 + Exonic hg19 BRCA TCGA-E9-A1RH-01A 4 12 Out-of-frame Intra-chr q22.33 Transcription factor q23 21409 ChimerSeq STARFusion TCGA_RNA-Seq TFAM-ANK3 TFAM chr10 60150620 + ANK3 chr10 61828635 - Exonic hg19 BRCA TCGA-E9-A1RH-01A 3 11 Out-of-frame Intra-chr q21.1 q21.2 Seq+ 21410 ChimerSeq STARFusion TCGA_RNA-Seq TFAM-ANK3 TFAM chr10 60150620 + ANK3 chr10 61827767 - Exonic hg19 BRCA TCGA-E9-A1RH-01A 2 11 Out-of-frame Intra-chr q21.1 q21.2 Seq+ 21411 ChimerSeq STARFusion TCGA_RNA-Seq LOC339505-MB LOC339505 chr1 20704804 - MB chr22 36013312 - Exonic hg19 BRCA TCGA-E9-A1RH-01A 3 0 3'UTR-5'UTR Inter-chr q12.3 21412 ChimerSeq STARFusion TCGA_RNA-Seq PRIM2-CASS4 PRIM2 chr6 57398317 + CASS4 chr20 55012220 + Exonic hg19 BRCA TCGA-E9-A1RH-01A 2 4 In-Frame Inter-chr p11.2 q13.31 21413 ChimerSeq STARFusion TCGA_RNA-Seq CCNI-SCARB2 CCNI chr4 77996625 - SCARB2 chr4 77117017 - Exonic hg19 BRCA TCGA-EW-A3E8-01B 12 54 5'UTR-CDS Intra-chr q21.1 q21.1 Seq+ 21414 ChimerSeq STARFusion TCGA_RNA-Seq PIK3CB-COPB2 PIK3CB chr3 138478015 - COPB2 chr3 139102277 - Exonic hg19 BRCA TCGA-EW-A3E8-01B 3 5 In-Frame Intra-chr q22.3 Oncogene q23 Seq+ 21415 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86351941 + Exonic hg19 BRCA TCGA-EW-A3E8-01B 2 3 Out-of-frame Intra-chr q21.2 q21.2 21416 ChimerSeq STARFusion TCGA_RNA-Seq PAK1-SHANK2 PAK1 chr11 77184597 - SHANK2 chr11 70507783 - Exonic hg19 BRCA TCGA-XX-A899-01A 30 76 5'UTR-CDS Intra-chr q14.1 STE:STE20 q13.4 Seq+ 21417 ChimerSeq STARFusion TCGA_RNA-Seq PAK1-CWF19L2 PAK1 chr11 77184597 - CWF19L2 chr11 107326502 - Exonic hg19 BRCA TCGA-XX-A899-01A 12 24 5'UTR-CDS Intra-chr q14.1 STE:STE20 q22.3 Seq+ 21418 ChimerSeq STARFusion TCGA_RNA-Seq RSF1-ADAM2 RSF1 chr11 77458081 - ADAM2 chr8 39607263 - Exonic hg19 BRCA TCGA-XX-A899-01A 6 33 In-Frame Inter-chr q14.1 Seq+ 21419 ChimerSeq STARFusion TCGA_RNA-Seq C11orf30-SHANK2 C11orf30 chr11 76237679 + SHANK2 chr11 70507783 - Exonic hg19 BRCA TCGA-XX-A899-01A 5 25 Out-of-frame Intra-chr q13.4 Seq+ 21420 ChimerSeq STARFusion TCGA_RNA-Seq XRRA1-GUCY1A2 XRRA1 chr11 74656063 - GUCY1A2 chr11 106647308 - Exonic hg19 BRCA TCGA-XX-A899-01A 3 24 5'UTR-CDS Intra-chr q13.4 q22.3 Oncogene Seq+ 21421 ChimerSeq STARFusion TCGA_RNA-Seq C11orf30-SHANK2 C11orf30 chr11 76234335 + SHANK2 chr11 70507783 - Exonic hg19 BRCA TCGA-XX-A899-01A 2 25 Out-of-frame Intra-chr q13.4 Seq+ 21422 ChimerSeq STARFusion TCGA_RNA-Seq COMMD10-CHSY3 COMMD10 chr5 115469875 + CHSY3 chr5 129519922 + Exonic hg19 BRCA TCGA-XX-A899-01A 2 3 In-Frame Intra-chr q23.1 q23.3 Seq+ 21423 ChimerSeq STARFusion TCGA_RNA-Seq CHD8-IMPG1 CHD8 chr14 21894287 - IMPG1 chr6 76744504 - Exonic hg19 BRCA TCGA-PE-A5DD-01A 6 8 Out-of-frame Inter-chr q11.2 q14.1 Seq+ 21424 ChimerSeq STARFusion TCGA_RNA-Seq NOMO3-TFAP4 NOMO3 chr16 16350015 + TFAP4 chr16 4312702 - Exonic hg19 BRCA TCGA-S3-AA0Z-01A 103 360 In-Frame Intra-chr p13.11 p13.3 Transcription factor Seq+ 21425 ChimerSeq STARFusion TCGA_RNA-Seq HOOK2-NFIX HOOK2 chr19 12885483 - NFIX chr19 13135835 + Exonic hg19 BRCA TCGA-S3-AA0Z-01A 22 104 In-Frame Intra-chr p13.13 p13.13 Transcription factor Seq+ 21426 ChimerSeq STARFusion TCGA_RNA-Seq ANKS3-C16orf71 ANKS3 chr16 4764052 - C16orf71 chr16 4796376 + Exonic hg19 BRCA TCGA-S3-AA0Z-01A 21 82 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 21427 ChimerSeq STARFusion TCGA_RNA-Seq EMP2-BFAR EMP2 chr16 10631785 - BFAR chr16 14755749 + Exonic hg19 BRCA TCGA-S3-AA0Z-01A 14 32 Out-of-frame Intra-chr p13.13 Tumor suppressor gene Seq+ 21428 ChimerSeq STARFusion TCGA_RNA-Seq BCL7C-OTOA BCL7C chr16 30900181 - OTOA chr16 21702905 + Exonic hg19 BRCA TCGA-S3-AA0Z-01A 8 30 Out-of-frame Intra-chr p11.2 p12.2 Seq+ 21429 ChimerSeq STARFusion TCGA_RNA-Seq GPRC5B-C16orf96 GPRC5B chr16 19873159 - C16orf96 chr16 4621562 + Exonic hg19 BRCA TCGA-S3-AA0Z-01A 5 21 In-Frame Intra-chr p12.3 p13.3 Seq+ 21430 ChimerSeq STARFusion TCGA_RNA-Seq ASH2L-ZFYVE28 ASH2L chr8 37976881 + ZFYVE28 chr4 2343342 - Exonic hg19 BRCA TCGA-LL-A7T0-01A 5 17 Out-of-frame Inter-chr p11.23 p16.3 Seq+ 21431 ChimerSeq STARFusion TCGA_RNA-Seq PDLIM5-SHISA5 PDLIM5 chr4 95539342 + SHISA5 chr3 48538726 - Exonic hg19 BRCA TCGA-LL-A7T0-01A 4 13 In-Frame Inter-chr q22.3 p21.31 Seq+ 21432 ChimerSeq STARFusion TCGA_RNA-Seq PDLIM5-ART3 PDLIM5 chr4 95376535 + ART3 chr4 76997034 + Exonic hg19 BRCA TCGA-LL-A7T0-01A 2 8 5'UTR-5'UTR Intra-chr q22.3 q21.1 Seq+ 21433 ChimerSeq STARFusion TCGA_RNA-Seq LMAN2L-MRPS5 LMAN2L chr2 97399256 - MRPS5 chr2 95774153 - Exonic hg19 BRCA TCGA-LL-A7T0-01A 2 5 Out-of-frame Intra-chr q11.2 q11.1 Seq+ 21434 ChimerSeq STARFusion TCGA_RNA-Seq FOXK2-MYO18A FOXK2 chr17 80545148 + MYO18A chr17 27409456 - Exonic hg19 BRCA TCGA-A8-A08O-01A 29 69 Out-of-frame Intra-chr q25.3 Transcription factor q11.2 Oncogene Seq+ 21435 ChimerSeq STARFusion TCGA_RNA-Seq DOCK1-NPS DOCK1 chr10 129142010 + NPS chr10 129347753 + Exonic hg19 BRCA TCGA-A8-A08O-01A 14 28 In-Frame Intra-chr q26.2 q26.2 Seq+ 21436 ChimerSeq STARFusion TCGA_RNA-Seq AGAP1-WDR11 AGAP1 chr2 236403493 + WDR11 chr10 122659541 + Exonic hg19 BRCA TCGA-A8-A08O-01A 10 31 In-Frame Inter-chr q37.2 q26.12 Tumor suppressor gene Seq+ 21437 ChimerSeq STARFusion TCGA_RNA-Seq MMD-PRKCA MMD chr17 53499031 - PRKCA chr17 64728806 + Exonic hg19 BRCA TCGA-A8-A08O-01A 7 6 Out-of-frame Intra-chr q22 q24.2 Seq+ 21438 ChimerSeq STARFusion TCGA_RNA-Seq MRPL12-USP32 MRPL12 chr17 79671746 + USP32 chr17 58422969 - Exonic hg19 BRCA TCGA-A8-A08O-01A 6 10 Out-of-frame Intra-chr q25.3 q23.2 Seq+ 21439 ChimerSeq STARFusion TCGA_RNA-Seq YPEL2-SDF2 YPEL2 chr17 57430887 + SDF2 chr17 26982501 - Exonic hg19 BRCA TCGA-A8-A08O-01A 4 17 Out-of-frame Intra-chr q22 q11.2 Seq+ 21440 ChimerSeq STARFusion TCGA_RNA-Seq APPBP2-PECAM1 APPBP2 chr17 58603155 - PECAM1 chr17 62401205 - Exonic hg19 BRCA TCGA-A8-A08O-01A 2 14 In-Frame Intra-chr q23.2 q23.3 Seq+ 21441 ChimerSeq STARFusion TCGA_RNA-Seq ITGB4-NARF ITGB4 chr17 73753188 + NARF chr17 80426640 + Exonic hg19 BRCA TCGA-A8-A08O-01A 2 7 Out-of-frame Intra-chr q25.1 q25.3 Seq+ 21442 ChimerSeq STARFusion TCGA_RNA-Seq STXBP4-PLEKHM1 STXBP4 chr17 53124515 + PLEKHM1 chr17 43517000 - Exonic hg19 BRCA TCGA-A8-A08O-01A 2 1 In-Frame Intra-chr q22 21443 ChimerSeq STARFusion TCGA_RNA-Seq TMED3-KIAA1024 TMED3 chr15 79606347 + KIAA1024 chr15 79748440 + Exonic hg19 BRCA TCGA-A8-A08O-01A 2 0 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 21444 ChimerSeq STARFusion TCGA_RNA-Seq SP3-OLA1 SP3 chr2 174819601 - OLA1 chr2 175006728 - Exonic hg19 BRCA TCGA-AO-A12F-01A 17 69 In-Frame Intra-chr q31.1 Transcription factor q31.1 Seq+ 21445 ChimerSeq STARFusion TCGA_RNA-Seq RPRD1A-RALGAPA2 RPRD1A chr18 33610771 - RALGAPA2 chr20 20661445 - Exonic hg19 BRCA TCGA-AO-A12F-01A 8 23 Out-of-frame Inter-chr q12.2 p11.23 Seq+ 21446 ChimerSeq STARFusion TCGA_RNA-Seq PLXNA3-TAZ PLXNA3 chrX 153701041 + TAZ chrX 153648997 + Exonic hg19 BRCA TCGA-AO-A12F-01A 4 34 3'UTR-CDS Intra-chr q28 q28 21447 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT7-NSD1 B4GALT7 chr5 177035623 + NSD1 chr5 176618885 + Exonic hg19 BRCA TCGA-AO-A12F-01A 4 10 In-Frame Intra-chr q35.3 q35.3 Oncogene Seq+ 21448 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT7-NSD1 B4GALT7 chr5 177034528 + NSD1 chr5 176618885 + Exonic hg19 BRCA TCGA-AO-A12F-01A 2 10 In-Frame Intra-chr q35.3 q35.3 Oncogene Seq+ 21449 ChimerSeq STARFusion TCGA_RNA-Seq LUC7L3-C17orf64 LUC7L3 chr17 48814387 + C17orf64 chr17 58506723 + Exonic hg19 BRCA TCGA-BH-A18R-01A 132 205 Out-of-frame Intra-chr q21.33 q23.2 Seq+ 21450 ChimerSeq STARFusion TCGA_RNA-Seq SLC35F2-CCDC162P SLC35F2 chr11 107729384 - CCDC162P chr6 109669630 + Exonic hg19 BRCA TCGA-BH-A18R-01A 20 137 CDS-3'UTR Inter-chr q22.3 q21 Seq+ 21451 ChimerSeq STARFusion TCGA_RNA-Seq SLC35F2-CCDC162P SLC35F2 chr11 107729384 - CCDC162P chr6 109665190 + Exonic hg19 BRCA TCGA-BH-A18R-01A 17 134 CDS-3'UTR Inter-chr q22.3 q21 Seq+ 21452 ChimerSeq STARFusion TCGA_RNA-Seq GOPC-ABLIM1 GOPC chr6 117900063 - ABLIM1 chr10 116251637 - Exonic hg19 BRCA TCGA-BH-A18R-01A 19 101 In-Frame Inter-chr q22.1 q25.3 Seq+ 21453 ChimerSeq STARFusion TCGA_RNA-Seq PPM1D-CCND1 PPM1D chr17 58725443 + CCND1 chr11 69466942 + Exonic hg19 BRCA TCGA-BH-A18R-01A 19 86 CDS-3'UTR Inter-chr q23.2 q13.3 Oncogene Seq+ 21454 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-CCDC170 ESR1 chr6 152023140 + CCDC170 chr6 151857453 + Exonic hg19 BRCA TCGA-BH-A18R-01A 23 65 5'UTR-CDS Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 KB Pub Seq+ 21455 ChimerSeq STARFusion TCGA_RNA-Seq SLC35F2-CCDC162P SLC35F2 chr11 107729227 - CCDC162P chr6 109665190 + Exonic hg19 BRCA TCGA-BH-A18R-01A 3 134 Out-of-frame Inter-chr q22.3 q21 Seq+ 21456 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-RNF169 BCAS3 chr17 58786686 + RNF169 chr11 74521229 + Exonic hg19 BRCA TCGA-BH-A18R-01A 23 50 In-Frame Inter-chr q23.2 q13.4 Seq+ 21457 ChimerSeq STARFusion TCGA_RNA-Seq PPM1D-CCND1 PPM1D chr17 58725443 + CCND1 chr11 69466670 + Exonic hg19 BRCA TCGA-BH-A18R-01A 5 86 CDS-3'UTR Inter-chr q23.2 q13.3 Oncogene Seq+ 21458 ChimerSeq STARFusion TCGA_RNA-Seq THRA-USP32 THRA chr17 38233861 + USP32 chr17 58499766 - Exonic hg19 BRCA TCGA-BH-A18R-01A 10 62 CDS-5'UTR Intra-chr q21.1 Tumor suppressor gene Transcription factor q23.2 21459 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-USP32 WIPF2 chr17 38375744 + USP32 chr17 58422969 - Exonic hg19 BRCA TCGA-BH-A18R-01A 9 42 5'UTR-CDS Intra-chr q21.2 q23.2 Seq+ 21460 ChimerSeq STARFusion TCGA_RNA-Seq ALG8-USP32 ALG8 chr11 77850540 - USP32 chr17 58422969 - Exonic hg19 BRCA TCGA-BH-A18R-01A 4 28 Out-of-frame Inter-chr q14.1 q23.2 Seq+ 21461 ChimerSeq STARFusion TCGA_RNA-Seq NF1-CDK5RAP3 NF1 chr17 29592357 + CDK5RAP3 chr17 46057959 + Exonic hg19 BRCA TCGA-BH-A18R-01A 5 23 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q21.32 Seq+ 21462 ChimerSeq STARFusion TCGA_RNA-Seq PGS1-KIF22 PGS1 chr17 76374889 + KIF22 chr16 29808214 + Exonic hg19 BRCA TCGA-BH-A18R-01A 8 11 Out-of-frame Inter-chr q25.3 p11.2 Seq+ 21463 ChimerSeq STARFusion TCGA_RNA-Seq YPEL2-PAK1 YPEL2 chr17 57474849 + PAK1 chr11 77047327 - Exonic hg19 BRCA TCGA-BH-A18R-01A 4 25 3'UTR-CDS Inter-chr q22 q14.1 STE:STE20 Seq+ 21464 ChimerSeq STARFusion TCGA_RNA-Seq NF1-CDK5RAP3 NF1 chr17 29592357 + CDK5RAP3 chr17 46058529 + Exonic hg19 BRCA TCGA-BH-A18R-01A 4 21 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q21.32 Seq+ 21465 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-SHANK2 BCAS3 chr17 58824640 + SHANK2 chr11 70349036 - Exonic hg19 BRCA TCGA-BH-A18R-01A 3 20 Out-of-frame Inter-chr q23.2 q13.4 Seq+ 21466 ChimerSeq STARFusion TCGA_RNA-Seq HEATR6-PPME1 HEATR6 chr17 58124670 - PPME1 chr11 73914773 + Exonic hg19 BRCA TCGA-BH-A18R-01A 4 14 Out-of-frame Inter-chr q23.1 q13.4 Seq+ 21467 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57697534 + VMP1 chr17 57886157 + Exonic hg19 BRCA TCGA-BH-A18R-01A 2 16 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 21468 ChimerSeq STARFusion TCGA_RNA-Seq VMP1-RAD51C VMP1 chr17 57816308 + RAD51C chr17 56787220 + Exonic hg19 BRCA TCGA-BH-A18R-01A 3 11 In-Frame Intra-chr q23.1 q22 Tumor suppressor gene 21469 ChimerSeq STARFusion TCGA_RNA-Seq LRP5-DRAP1 LRP5 chr11 68133168 + DRAP1 chr11 65687253 + Exonic hg19 BRCA TCGA-BH-A18R-01A 4 6 Out-of-frame Intra-chr q13.2 q13.1 Transcription factor Seq+ 21470 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-USP32 FAM222B chr17 27117396 - USP32 chr17 58422969 - Exonic hg19 BRCA TCGA-BH-A18R-01A 2 10 5'UTR-CDS Intra-chr q11.2 q23.2 21471 ChimerSeq STARFusion TCGA_RNA-Seq SKA2-CACNG4 SKA2 chr17 57232492 - CACNG4 chr17 65014305 + Exonic hg19 BRCA TCGA-BH-A18R-01A 2 9 Out-of-frame Intra-chr q22 q24.2 21472 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1467-EMP1 KIAA1467 chr12 13224330 + EMP1 chr12 13364403 + Exonic hg19 BRCA TCGA-BH-A18R-01A 2 8 CDS-5'UTR Intra-chr p13.1 Tumor suppressor gene 21473 ChimerSeq STARFusion TCGA_RNA-Seq MEX3D-DCTN6 MEX3D chr19 1567463 - DCTN6 chr8 30032601 + Exonic hg19 BRCA TCGA-EW-A1P4-01A 47 116 In-Frame Inter-chr p13.3 p12 Seq+ 21474 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61574410 - ANK3 chr10 61789584 - Exonic hg19 BRCA TCGA-EW-A1P4-01A 25 88 CDS-3'UTR Intra-chr q21.2 q21.2 Seq+ 21475 ChimerSeq STARFusion TCGA_RNA-Seq KCMF1-PRKDC KCMF1 chr2 85255179 + PRKDC chr8 48772320 - Exonic hg19 BRCA TCGA-EW-A1P4-01A 8 77 In-Frame Inter-chr p11.2 Transcription factor q11.21 Oncogene Seq+ 21476 ChimerSeq STARFusion TCGA_RNA-Seq KCMF1-PRKDC KCMF1 chr2 85255179 + PRKDC chr8 48771547 - Exonic hg19 BRCA TCGA-EW-A1P4-01A 2 77 Out-of-frame Inter-chr p11.2 Transcription factor q11.21 Oncogene Seq+ 21477 ChimerSeq STARFusion TCGA_RNA-Seq TFDP2-PLD1 TFDP2 chr3 141747421 - PLD1 chr3 171455872 - Exonic hg19 BRCA TCGA-EW-A1P4-01A 3 10 5'UTR-5'UTR Intra-chr q23 Transcription factor q26.31 Tumor suppressor gene Seq+ 21478 ChimerSeq STARFusion TCGA_RNA-Seq STK4-C20orf197 STK4 chr20 43610584 + C20orf197 chr20 58647197 + Exonic hg19 BRCA TCGA-EW-A1P4-01A 4 3 CDS-3'UTR Intra-chr q13.12 q13.33 21479 ChimerSeq STARFusion TCGA_RNA-Seq TFDP2-PLD1 TFDP2 chr3 141811903 - PLD1 chr3 171455872 - Exonic hg19 BRCA TCGA-EW-A1P4-01A 2 10 5'UTR-5'UTR Intra-chr q23 Transcription factor q26.31 Tumor suppressor gene Seq+ 21480 ChimerSeq STARFusion TCGA_RNA-Seq C17orf75-ST5 C17orf75 chr17 30668223 - ST5 chr11 8719183 - Exonic hg19 BRCA TCGA-EW-A1P4-01A 2 0 Out-of-frame Inter-chr q11.2 p15.4 Tumor suppressor gene 21481 ChimerSeq STARFusion TCGA_RNA-Seq DIAPH1-BRIX1 DIAPH1 chr5 140963691 - BRIX1 chr5 34924952 + Exonic hg19 BRCA TCGA-EW-A1P4-01A 2 0 In-Frame Intra-chr q31.3 p13.2 21482 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 BRCA TCGA-AN-A0XP-01A 2 6 In-Frame Intra-chr p13.3 p13.3 21483 ChimerSeq STARFusion TCGA_RNA-Seq MSL1-LOC284100 MSL1 chr17 38289362 + LOC284100 chr17 36214848 - Exonic hg19 BRCA TCGA-A2-A1G1-01A 106 454 CDS-3'UTR Intra-chr q21.1 21484 ChimerSeq STARFusion TCGA_RNA-Seq POLR2A-ALOX12 POLR2A chr17 7388176 + ALOX12 chr17 6902576 + Exonic hg19 BRCA TCGA-A2-A1G1-01A 62 95 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 21485 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-MSL1 FBXL20 chr17 37453380 - MSL1 chr17 38290532 + Exonic hg19 BRCA TCGA-A2-A1G1-01A 44 159 In-Frame Intra-chr q12 q21.1 Seq+ 21486 ChimerSeq STARFusion TCGA_RNA-Seq LOC541471-ANAPC1 LOC541471 chr2 112252462 - ANAPC1 chr2 112566758 - Exonic hg19 BRCA TCGA-A2-A1G1-01A 30 66 3'UTR-CDS Intra-chr q13 Tumor suppressor gene 21487 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-NFIX STARD3 chr17 37810003 + NFIX chr19 13135835 + Exonic hg19 BRCA TCGA-A2-A1G1-01A 5 85 In-Frame Inter-chr q12 p13.13 Transcription factor Seq+ 21488 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-SYNRG FBXL20 chr17 37453380 - SYNRG chr17 35914161 - Exonic hg19 BRCA TCGA-A2-A1G1-01A 11 55 Out-of-frame Intra-chr q12 Seq+ 21489 ChimerSeq STARFusion TCGA_RNA-Seq URI1-ZNF536 URI1 chr19 30503438 + ZNF536 chr19 30934468 + Exonic hg19 BRCA TCGA-A2-A1G1-01A 9 53 5'UTR-5'UTR Intra-chr q12 q12 Transcription factor 21490 ChimerSeq STARFusion TCGA_RNA-Seq CTIF-WASF2 CTIF chr18 46065683 + WASF2 chr1 27755443 - Exonic hg19 BRCA TCGA-A2-A1G1-01A 5 26 5'UTR-5'UTR Inter-chr p36.11 Seq+ 21491 ChimerSeq STARFusion TCGA_RNA-Seq CTIF-WASF2 CTIF chr18 46066202 + WASF2 chr1 27755443 - Exonic hg19 BRCA TCGA-A2-A1G1-01A 5 26 5'UTR-5'UTR Inter-chr p36.11 Seq+ 21492 ChimerSeq STARFusion TCGA_RNA-Seq NFIX-HNF1B NFIX chr19 13206543 + HNF1B chr17 36070671 - Exonic hg19 BRCA TCGA-A2-A1G1-01A 6 21 3'UTR-CDS Inter-chr p13.13 Transcription factor q12 Transcription factor Seq+ 21493 ChimerSeq STARFusion TCGA_RNA-Seq MKI67IP-BTBD2 MKI67IP chr2 122494322 - BTBD2 chr19 1997462 - Exonic hg19 BRCA TCGA-A2-A1G1-01A 5 24 Out-of-frame Inter-chr p13.3 Seq+ 21494 ChimerSeq STARFusion TCGA_RNA-Seq MED1-TBC1D3H MED1 chr17 37607291 - TBC1D3H chr17 34755466 - Exonic hg19 BRCA TCGA-A2-A1G1-01A 5 15 CDS-5'UTR Intra-chr q12 Tumor suppressor gene q12 21495 ChimerSeq STARFusion TCGA_RNA-Seq CASC3-ZNF254 CASC3 chr17 38297860 + ZNF254 chr19 24309056 + Exonic hg19 BRCA TCGA-A2-A1G1-01A 4 18 Out-of-frame Inter-chr q21.1 p12 Transcription factor Seq+ 21496 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R2-EMID1 PPP6R2 chr22 50845304 + EMID1 chr22 29627009 + Exonic hg19 BRCA TCGA-A2-A1G1-01A 2 23 In-Frame Intra-chr q13.33 q12.2 Seq+ 21497 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R2-EMID1 PPP6R2 chr22 50845304 + EMID1 chr22 29621122 + Exonic hg19 BRCA TCGA-A2-A1G1-01A 2 23 Out-of-frame Intra-chr q13.33 q12.2 Seq+ 21498 ChimerSeq STARFusion TCGA_RNA-Seq BTBD2-ISG20L2 BTBD2 chr19 1986895 - ISG20L2 chr1 156697060 - Exonic hg19 BRCA TCGA-A2-A1G1-01A 3 11 Out-of-frame Inter-chr p13.3 q23.1 Seq+ 21499 ChimerSeq STARFusion TCGA_RNA-Seq MED1-TBC1D3C MED1 chr17 37607291 - TBC1D3C chr17 34590455 - Exonic hg19 BRCA TCGA-A2-A1G1-01A 2 15 CDS-5'UTR Intra-chr q12 Tumor suppressor gene q12 21500 ChimerSeq STARFusion TCGA_RNA-Seq MED1-TBC1D3P2 MED1 chr17 37607291 - TBC1D3P2 chr17 60351477 - Exonic hg19 BRCA TCGA-A2-A1G1-01A 2 7 CDS-3'UTR Intra-chr q12 Tumor suppressor gene q23.2 21501 ChimerSeq STARFusion TCGA_RNA-Seq RNF4-FAM193A RNF4 chr4 2470985 + FAM193A chr4 2641462 + Exonic hg19 BRCA TCGA-A2-A1G1-01A 2 5 5'UTR-5'UTR Intra-chr p16.3 p16.3 Seq+ 21502 ChimerSeq STARFusion TCGA_RNA-Seq BID-MICAL3 BID chr22 18257147 - MICAL3 chr22 18274067 - Exonic hg19 BRCA TCGA-A2-A1G1-01A 2 0 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 21503 ChimerSeq STARFusion TCGA_RNA-Seq NUDCD1-TMEM184C NUDCD1 chr8 110334538 - TMEM184C chr4 148544985 + Exonic hg19 BRCA TCGA-E2-A1LH-01A 2 3 In-Frame Inter-chr q23.1 q31.23 Seq+ 21504 ChimerSeq STARFusion TCGA_RNA-Seq ACVR1B-PCBP2 ACVR1B chr12 52345618 + PCBP2 chr12 53849669 + Exonic hg19 BRCA TCGA-B6-A0WX-01A 4 18 Out-of-frame Intra-chr q13.13 Oncogene q13.13 Seq+ 21505 ChimerSeq STARFusion TCGA_RNA-Seq ACVR1B-PCBP2 ACVR1B chr12 52346555 + PCBP2 chr12 53849669 + Exonic hg19 BRCA TCGA-B6-A0WX-01A 3 18 5'UTR-CDS Intra-chr q13.13 Oncogene q13.13 Seq+ 21506 ChimerSeq STARFusion TCGA_RNA-Seq PTPRT-NCOA3 PTPRT chr20 40944363 - NCOA3 chr20 46211927 + Exonic hg19 BRCA TCGA-E2-A15F-01A 89 138 CDS-5'UTR Intra-chr q13.11 Oncogene Tumor suppressor gene q13.12 Transcription factor Seq+ 21507 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-PLAT WHSC1L1 chr8 38239317 - PLAT chr8 42050729 - Exonic hg19 BRCA TCGA-E2-A15F-01A 4 22 5'UTR-5'UTR Intra-chr p11.23 Tumor suppressor gene p11.21 21508 ChimerSeq STARFusion TCGA_RNA-Seq TOP1-PTPRT TOP1 chr20 39658095 + PTPRT chr20 40911165 - Exonic hg19 BRCA TCGA-E2-A15F-01A 4 9 Out-of-frame Intra-chr q12 Oncogene q13.11 Oncogene Tumor suppressor gene Seq+ 21509 ChimerSeq STARFusion TCGA_RNA-Seq CUL3-IRS1 CUL3 chr2 225422376 - IRS1 chr2 227600966 - Exonic hg19 BRCA TCGA-E9-A1NE-01A 67 271 CDS-3'UTR Intra-chr q36.2 q36.3 Seq+ 21510 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF1-BCAS4 ZNRF1 chr16 75033993 + BCAS4 chr20 49434748 + Exonic hg19 BRCA TCGA-E9-A1NE-01A 3 12 Out-of-frame Inter-chr q23.1 q13.13 Seq+ 21511 ChimerSeq STARFusion TCGA_RNA-Seq TRAP1-ADCY9 TRAP1 chr16 3721723 - ADCY9 chr16 4029276 - Exonic hg19 BRCA TCGA-E9-A1NE-01A 3 7 In-Frame Intra-chr p13.3 p13.3 Seq+ 21512 ChimerSeq STARFusion TCGA_RNA-Seq RHBG-CCT3 RHBG chr1 156339227 + CCT3 chr1 156305679 - Exonic hg19 BRCA TCGA-E9-A1NE-01A 2 8 In-Frame Intra-chr q22 q22 Seq+ 21513 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-HNRNPA2B1 CPSF6 chr12 69656342 + HNRNPA2B1 chr7 26237352 - Exonic hg19 BRCA TCGA-E9-A1NE-01A 2 1 3'UTR-CDS Inter-chr q15 p15.2 21514 ChimerSeq STARFusion TCGA_RNA-Seq LRPPRC-EIF4G2 LRPPRC chr2 44123773 - EIF4G2 chr11 10820660 - Exonic hg19 BRCA TCGA-E9-A1NE-01A 2 1 Out-of-frame Inter-chr p21 p15.4 Seq+ 21515 ChimerSeq STARFusion TCGA_RNA-Seq DYRK1A-ZBTB46 DYRK1A chr21 38845182 + ZBTB46 chr20 62422143 - Exonic hg19 BRCA TCGA-C8-A130-01A 16 56 CDS-5'UTR Inter-chr q22.13 CMGC:DYRK q13.33 Transcription factor Seq+ 21516 ChimerSeq STARFusion TCGA_RNA-Seq DSCR3-MACROD2 DSCR3 chr21 38639539 - MACROD2 chr20 16021846 + Exonic hg19 BRCA TCGA-C8-A130-01A 2 15 Out-of-frame Inter-chr q22.13 p12.1 Seq+ 21517 ChimerSeq STARFusion TCGA_RNA-Seq TMCO3-KATNAL2 TMCO3 chr13 114193822 + KATNAL2 chr18 44572828 + Exonic hg19 BRCA TCGA-C8-A130-01A 2 10 CDS-5'UTR Inter-chr q34 q21.1 Seq+ 21518 ChimerSeq STARFusion TCGA_RNA-Seq RPS20-TMEM70 RPS20 chr8 56986628 - TMEM70 chr8 74894454 + Exonic hg19 BRCA TCGA-A8-A082-01A 3 1 Out-of-frame Intra-chr q12.1 q21.11 21519 ChimerSeq STARFusion TCGA_RNA-Seq TPTE2P5-PAN3 TPTE2P5 chr13 41400642 - PAN3 chr13 28830429 + Exonic hg19 BRCA TCGA-A8-A082-01A 2 1 Out-of-frame Intra-chr q14.11 q12.2 21520 ChimerSeq STARFusion TCGA_RNA-Seq CCDC117-HSCB CCDC117 chr22 29179633 + HSCB chr22 29147229 + Exonic hg19 BRCA TCGA-A8-A07L-01A 23 129 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 21521 ChimerSeq STARFusion TCGA_RNA-Seq AKAP8-VMP1 AKAP8 chr19 15469778 - VMP1 chr17 57842332 + Exonic hg19 BRCA TCGA-A8-A07L-01A 14 90 In-Frame Inter-chr p13.12 Transcription factor q23.1 Seq+ 21522 ChimerSeq STARFusion TCGA_RNA-Seq MCM10-OPTN MCM10 chr10 13225100 + OPTN chr10 13154453 + Exonic hg19 BRCA TCGA-A8-A07L-01A 12 74 In-Frame Intra-chr p13 p13 Seq+ 21523 ChimerSeq STARFusion TCGA_RNA-Seq GDAP2-SPAG17 GDAP2 chr1 118472071 - SPAG17 chr1 118539366 - Exonic hg19 BRCA TCGA-A8-A07L-01A 6 55 5'UTR-CDS Intra-chr p12 p12 Seq+ 21524 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A17-ST13 SLC25A17 chr22 41215199 - ST13 chr22 41240913 - Exonic hg19 BRCA TCGA-A8-A07L-01A 2 57 Out-of-frame Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 21525 ChimerSeq STARFusion TCGA_RNA-Seq AP2A2-TMEM80 AP2A2 chr11 970223 + TMEM80 chr11 700222 + Exonic hg19 BRCA TCGA-A8-A07L-01A 4 42 Out-of-frame Intra-chr p15.5 p15.5 Seq+ 21526 ChimerSeq STARFusion TCGA_RNA-Seq AP2A2-TMEM80 AP2A2 chr11 959505 + TMEM80 chr11 700615 + Exonic hg19 BRCA TCGA-A8-A07L-01A 2 42 In-Frame Intra-chr p15.5 p15.5 Seq+ 21527 ChimerSeq STARFusion TCGA_RNA-Seq AP2A2-TMEM80 AP2A2 chr11 959505 + TMEM80 chr11 702945 + Exonic hg19 BRCA TCGA-A8-A07L-01A 2 42 In-Frame Intra-chr p15.5 p15.5 Seq+ 21528 ChimerSeq STARFusion TCGA_RNA-Seq SFMBT1-RFT1 SFMBT1 chr3 53079832 - RFT1 chr3 53140885 - Exonic hg19 BRCA TCGA-A8-A07L-01A 4 22 5'UTR-CDS Intra-chr p21.1 p21.1 Seq+ 21529 ChimerSeq STARFusion TCGA_RNA-Seq LRBA-CASP12 LRBA chr4 151604703 - CASP12 chr11 104768195 - Exonic hg19 BRCA TCGA-A8-A07L-01A 2 27 Out-of-frame Inter-chr q31.3 q22.3 Seq+ 21530 ChimerSeq STARFusion TCGA_RNA-Seq TRERF1-MRPL14 TRERF1 chr6 42418915 - MRPL14 chr6 44084366 - Exonic hg19 BRCA TCGA-A8-A07L-01A 2 24 5'UTR-5'UTR Intra-chr p21.1 Transcription factor p21.1 Seq+ 21531 ChimerSeq STARFusion TCGA_RNA-Seq SYNE2-MIPOL1 SYNE2 chr14 64319861 + MIPOL1 chr14 37892060 + Exonic hg19 BRCA TCGA-A8-A07L-01A 5 7 5'UTR-CDS Intra-chr q23.2 q13.3 Seq+ 21532 ChimerSeq STARFusion TCGA_RNA-Seq SHOC2-RBM20 SHOC2 chr10 112679415 + RBM20 chr10 112570141 + Exonic hg19 BRCA TCGA-A8-A07L-01A 2 1 5'UTR-CDS Intra-chr q25.2 q25.2 21533 ChimerSeq STARFusion TCGA_RNA-Seq TSKU-ACER3 TSKU chr11 76494448 + ACER3 chr11 76637601 + Exonic hg19 BRCA TCGA-A8-A07L-01A 2 1 5'UTR-CDS Intra-chr q13.5 q13.5 21534 ChimerSeq STARFusion TCGA_RNA-Seq ACTR3-LOC100507412 ACTR3 chr2 114647900 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-B6-A409-01A 5 17 CDS-5'UTR Inter-chr q14.1 21535 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF2-BBS9 ZNRF2 chr7 30363353 + BBS9 chr7 33423278 + Exonic hg19 BRCA TCGA-B6-A409-01A 2 1 In-Frame Intra-chr p14.3 p14.3 Seq+ 21536 ChimerSeq STARFusion TCGA_RNA-Seq ASS1-NCS1 ASS1 chr9 133355836 + NCS1 chr9 132963237 + Exonic hg19 BRCA TCGA-A8-A0A4-01A 15 41 In-Frame Intra-chr q34.11 Tumor suppressor gene q34.11 Seq+ 21537 ChimerSeq STARFusion TCGA_RNA-Seq RILPL1-SARNP RILPL1 chr12 123968727 - SARNP chr12 56151337 - Exonic hg19 BRCA TCGA-A8-A0A4-01A 5 12 Out-of-frame Intra-chr q24.31 q13.2 Seq+ 21538 ChimerSeq STARFusion TCGA_RNA-Seq PPARA-FBLN1 PPARA chr22 46594488 + FBLN1 chr22 45942965 + Exonic hg19 BRCA TCGA-UU-A93S-01A 16 63 In-Frame Intra-chr q13.31 Tumor suppressor gene Transcription factor q13.31 Tumor suppressor gene Seq+ 21539 ChimerSeq STARFusion TCGA_RNA-Seq CHD2-LOC100507217 CHD2 chr15 93467782 + LOC100507217 chr15 93435234 + Exonic hg19 BRCA TCGA-UU-A93S-01A 11 26 CDS-5'UTR Intra-chr q26.1 21540 ChimerSeq STARFusion TCGA_RNA-Seq PDDC1-CHID1 PDDC1 chr11 771333 - CHID1 chr11 883303 - Exonic hg19 BRCA TCGA-UU-A93S-01A 4 13 Out-of-frame Intra-chr p15.5 21541 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-TGIF1 DNM2 chr19 10870487 + TGIF1 chr18 3418141 + Exonic hg19 BRCA TCGA-UU-A93S-01A 2 13 CDS-5'UTR Inter-chr p13.2 p11.31 Transcription factor Seq+ 21542 ChimerSeq STARFusion TCGA_RNA-Seq UBE2K-LIAS UBE2K chr4 39700010 + LIAS chr4 39462410 + Exonic hg19 BRCA TCGA-UU-A93S-01A 2 13 In-Frame Intra-chr p14 p14 Seq+ 21543 ChimerSeq STARFusion TCGA_RNA-Seq TRIM37-C17orf67 TRIM37 chr17 57119174 - C17orf67 chr17 54902214 - Exonic hg19 BRCA TCGA-UU-A93S-01A 2 9 CDS-5'UTR Intra-chr q22 q22 Seq+ 21544 ChimerSeq STARFusion TCGA_RNA-Seq TRIM37-C17orf67 TRIM37 chr17 57119174 - C17orf67 chr17 54902682 - Exonic hg19 BRCA TCGA-UU-A93S-01A 2 9 CDS-5'UTR Intra-chr q22 q22 Seq+ 21545 ChimerSeq STARFusion TCGA_RNA-Seq LOC100133091-ZP3 LOC100133091 chr7 76180839 + ZP3 chr7 76054369 + Exonic hg19 BRCA TCGA-UU-A93S-01A 3 4 5'UTR-5'UTR Intra-chr q11.23 21546 ChimerSeq STARFusion TCGA_RNA-Seq TUBGCP4-TMEM62 TUBGCP4 chr15 43678528 + TMEM62 chr15 43470805 + Exonic hg19 BRCA TCGA-UU-A93S-01A 2 7 Out-of-frame Intra-chr q15.3 q15.2 Seq+ 21547 ChimerSeq STARFusion TCGA_RNA-Seq HECA-ABRACL HECA chr6 139456804 + ABRACL chr6 139355292 + Exonic hg19 BRCA TCGA-UU-A93S-01A 2 1 CDS-5'UTR Intra-chr q24.1 Tumor suppressor gene q24.1 21548 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2B-NUP214 PRRC2B chr9 134346370 + NUP214 chr9 134064440 + Exonic hg19 BRCA TCGA-UU-A93S-01A 2 0 Out-of-frame Intra-chr q34.13 q34.13 Oncogene Seq+ 21549 ChimerSeq STARFusion TCGA_RNA-Seq YAF2-SYT1 YAF2 chr12 42631401 - SYT1 chr12 79258778 + Exonic hg19 BRCA TCGA-AR-A2LN-01A 3 2 CDS-5'UTR Intra-chr q12 q21.2 Seq+ 21550 ChimerSeq STARFusion TCGA_RNA-Seq BMPR1B-PDLIM5 BMPR1B chr4 96046272 + PDLIM5 chr4 95444875 + Exonic hg19 BRCA TCGA-A7-A26J-01A 3 2 In-Frame Intra-chr q22.3 TKL:STKR q22.3 Seq+ 21551 ChimerSeq STARFusion TCGA_RNA-Seq SCMH1-AGO3 SCMH1 chr1 41626547 - AGO3 chr1 36492715 + Exonic hg19 BRCA TCGA-A7-A26J-01A 2 0 Out-of-frame Intra-chr p34.2 Transcription factor p34.3 Seq+ 21552 ChimerSeq STARFusion TCGA_RNA-Seq LRRC37BP1-ASIC2 LRRC37BP1 chr17 28937960 + ASIC2 chr17 31439085 - Exonic hg19 BRCA TCGA-AR-A255-01A 11 30 5'UTR-CDS Intra-chr q11.2 q12 21553 ChimerSeq STARFusion TCGA_RNA-Seq RABGAP1L-MGST3 RABGAP1L chr1 174128795 + MGST3 chr1 165619078 + Exonic hg19 BRCA TCGA-AR-A255-01A 6 21 5'UTR-5'UTR Intra-chr q25.1 q24.1 Seq+ 21554 ChimerSeq STARFusion TCGA_RNA-Seq PARL-SGCD PARL chr3 183584471 - SGCD chr5 156194379 + Exonic hg19 BRCA TCGA-B6-A0WZ-01A 6 0 Out-of-frame Inter-chr q27.1 q33.2 21555 ChimerSeq STARFusion TCGA_RNA-Seq SUCO-C1orf105 SUCO chr1 172502637 + C1orf105 chr1 172425555 + Exonic hg19 BRCA TCGA-A2-A0T2-01A 2 22 Out-of-frame Intra-chr q24.3 q24.3 21556 ChimerSeq STARFusion TCGA_RNA-Seq CUL4A-PTP4A2 CUL4A chr13 113864402 + PTP4A2 chr1 32385259 - Exonic hg19 BRCA TCGA-E2-A15J-01A 2 0 5'UTR-5'UTR Inter-chr q34 p35.2 21557 ChimerSeq STARFusion TCGA_RNA-Seq B3GNTL1-CLCN4 B3GNTL1 chr17 81006347 - CLCN4 chrX 10153062 + Exonic hg19 BRCA TCGA-BH-A6R9-01A 3 2 CDS-5'UTR Inter-chr p22.2 Seq+ 21558 ChimerSeq STARFusion TCGA_RNA-Seq SPARC-ELK3 SPARC chr5 151042567 - ELK3 chr12 96640958 + Exonic hg19 BRCA TCGA-BH-A0AZ-01A 9 2 Out-of-frame Inter-chr q33.1 Tumor suppressor gene q23.1 Transcription factor 21559 ChimerSeq STARFusion TCGA_RNA-Seq VPS41-ANKFN1 VPS41 chr7 38937691 - ANKFN1 chr17 54517688 + Exonic hg19 BRCA TCGA-BH-A0AZ-01A 2 4 Out-of-frame Inter-chr p14.1 q22 Seq+ 21560 ChimerSeq STARFusion TCGA_RNA-Seq FARSA-SEPW1 FARSA chr19 13034965 - SEPW1 chr19 48287547 + Exonic hg19 BRCA TCGA-BH-A0AZ-01A 2 0 CDS-3'UTR Intra-chr p13.13 21561 ChimerSeq STARFusion TCGA_RNA-Seq CTCF-NUTF2 CTCF chr16 67605167 + NUTF2 chr16 67899005 + Exonic hg19 BRCA TCGA-A2-A3XY-01A 26 142 5'UTR-5'UTR Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 Seq+ 21562 ChimerSeq STARFusion TCGA_RNA-Seq FAM24B-DDX11L2 FAM24B chr10 124639001 - DDX11L2 chr2 114359006 - Exonic hg19 BRCA TCGA-A2-A3XY-01A 6 12 3'UTR-3'UTR Inter-chr q26.13 q14.1 21563 ChimerSeq STARFusion TCGA_RNA-Seq SLC37A1-PCNT SLC37A1 chr21 43987168 + PCNT chr21 47831103 + Exonic hg19 BRCA TCGA-A2-A3XY-01A 3 20 In-Frame Intra-chr q22.3 q22.3 Seq+ 21564 ChimerSeq STARFusion TCGA_RNA-Seq CTIF-SMAD2 CTIF chr18 46146116 + SMAD2 chr18 45423180 - Exonic hg19 BRCA TCGA-A2-A3XY-01A 5 4 CDS-5'UTR Intra-chr q21.1 Oncogene Tumor suppressor gene Seq+ 21565 ChimerSeq STARFusion TCGA_RNA-Seq SETD2-ULK4 SETD2 chr3 47155366 - ULK4 chr3 41504744 - Exonic hg19 BRCA TCGA-A2-A3XY-01A 3 9 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene p22.1 Other:ULK Seq+ 21566 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-AGO2 PTK2 chr8 142011224 - AGO2 chr8 141595410 - Exonic hg19 BRCA TCGA-A2-A3XY-01A 2 7 Out-of-frame Intra-chr q24.3 q24.3 21567 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-AGO2 PTK2 chr8 141874411 - AGO2 chr8 141545668 - Exonic hg19 BRCA TCGA-A2-A3XY-01A 2 7 Out-of-frame Intra-chr q24.3 q24.3 21568 ChimerSeq STARFusion TCGA_RNA-Seq MINA-CACNA2D2 MINA chr3 97691225 - CACNA2D2 chr3 50513630 - Exonic hg19 BRCA TCGA-A2-A3XY-01A 2 3 5'UTR-CDS Intra-chr p21.31 21569 ChimerSeq STARFusion TCGA_RNA-Seq ELMO2-GNAS ELMO2 chr20 45035187 - GNAS chr20 57470667 + Exonic hg19 BRCA TCGA-A2-A3XY-01A 2 2 5'UTR-5'UTR Intra-chr q13.12 q13.32 Oncogene 21570 ChimerSeq STARFusion TCGA_RNA-Seq WDR74-RN7SL664P WDR74 chr11 62609175 - RN7SL664P chr3 48136384 - Exonic hg19 BRCA TCGA-A7-A13G-01A 30 9 Out-of-frame Inter-chr q12.3 p21.31 21571 ChimerSeq STARFusion TCGA_RNA-Seq RPPH1-RN7SK RPPH1 chr14 20811413 - RN7SK chr6 52860548 + Exonic hg19 BRCA TCGA-A7-A13G-01A 5 73 Out-of-frame Inter-chr q11.2 p12.2 21572 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL1-RPPH1 RN7SL1 chr14 50053449 + RPPH1 chr14 20811272 - Exonic hg19 BRCA TCGA-A7-A13G-01A 5 55 Out-of-frame Intra-chr q21.3 q11.2 21573 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL2-WDR74 RN7SL2 chr14 50329358 - WDR74 chr11 62609169 - Exonic hg19 BRCA TCGA-A7-A13G-01A 3 41 Out-of-frame Inter-chr q21.3 q12.3 21574 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL1-RMRP RN7SL1 chr14 50053403 + RMRP chr9 35657792 - Exonic hg19 BRCA TCGA-A7-A13G-01A 3 23 Out-of-frame Inter-chr q21.3 p13.3 21575 ChimerSeq STARFusion TCGA_RNA-Seq LINC00993-ATP8A2P1 LINC00993 chr10 37635757 + ATP8A2P1 chr10 37550792 + Exonic hg19 BRCA TCGA-A7-A13G-01A 3 20 Out-of-frame Intra-chr p11.21 p11.21 21576 ChimerSeq STARFusion TCGA_RNA-Seq SCGB2A2-CHD8 SCGB2A2 chr11 62040586 + CHD8 chr14 21876927 - Exonic hg19 BRCA TCGA-E9-A3Q9-01A 52 1 Out-of-frame Inter-chr q12.3 q11.2 21577 ChimerSeq STARFusion TCGA_RNA-Seq NAA15-SLC10A7 NAA15 chr4 140291558 + SLC10A7 chr4 147179989 - Exonic hg19 BRCA TCGA-E9-A3Q9-01A 5 11 Out-of-frame Intra-chr q31.1 q31.22 Seq+ 21578 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPA2B1-SCGB2A2 HNRNPA2B1 chr7 26233195 - SCGB2A2 chr11 62038353 + Exonic hg19 BRCA TCGA-E9-A3Q9-01A 2 4 In-Frame Inter-chr p15.2 q12.3 21579 ChimerSeq STARFusion TCGA_RNA-Seq MSL1-LOC284100 MSL1 chr17 38289362 + LOC284100 chr17 36214848 - Exonic hg19 BRCA TCGA-E2-A15M-01A 9 40 CDS-3'UTR Intra-chr q21.1 21580 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPAB-F12 HNRNPAB chr5 177638027 + F12 chr5 176831971 - Exonic hg19 BRCA TCGA-E2-A15M-01A 6 45 Out-of-frame Intra-chr q35.3 q35.3 Seq+ 21581 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-MSL1 FBXL20 chr17 37453380 - MSL1 chr17 38290532 + Exonic hg19 BRCA TCGA-E2-A15M-01A 4 17 In-Frame Intra-chr q12 q21.1 Seq+ 21582 ChimerSeq STARFusion TCGA_RNA-Seq LOC541471-ANAPC1 LOC541471 chr2 112252462 - ANAPC1 chr2 112566758 - Exonic hg19 BRCA TCGA-E2-A15M-01A 5 5 3'UTR-CDS Intra-chr q13 Tumor suppressor gene 21583 ChimerSeq STARFusion TCGA_RNA-Seq SNX30-DENND1A SNX30 chr9 115580095 + DENND1A chr9 126220176 - Exonic hg19 BRCA TCGA-E2-A15M-01A 4 7 In-Frame Intra-chr q32 q33.3 Seq+ 21584 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-PMEPA1 RNA45S5 chrUn_gl000220 112176 + PMEPA1 chr20 56226927 - Exonic hg19 BRCA TCGA-E2-A15M-01A 3 0 Out-of-frame Inter-chr q13.31 21585 ChimerSeq STARFusion TCGA_RNA-Seq PRKACA-SPPL2B PRKACA chr19 14213628 - SPPL2B chr19 2334601 + Exonic hg19 BRCA TCGA-E2-A15M-01A 2 2 Out-of-frame Intra-chr p13.12 p13.3 21586 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP28-PSPN ARHGAP28 chr18 6909023 + PSPN chr19 6375627 - Exonic hg19 BRCA TCGA-E2-A15M-01A 2 1 In-Frame Inter-chr p11.31 p13.3 21587 ChimerSeq STARFusion TCGA_RNA-Seq BBX-WBSCR17 BBX chr3 107517567 + WBSCR17 chr7 70800536 + Exonic hg19 BRCA TCGA-E2-A15M-01A 2 1 In-Frame Inter-chr q13.12 Transcription factor q11.22 Seq+ 21588 ChimerSeq STARFusion TCGA_RNA-Seq MPHOSPH8-SUGT1P3 MPHOSPH8 chr13 20233429 + SUGT1P3 chr13 41486859 - Exonic hg19 BRCA TCGA-E2-A15M-01A 2 0 CDS-3'UTR Intra-chr q12.11 q14.11 21589 ChimerSeq STARFusion TCGA_RNA-Seq TRIM24-SVOPL TRIM24 chr7 138258387 + SVOPL chr7 138281275 - Exonic hg19 BRCA TCGA-C8-A1HM-01A 33 135 Out-of-frame Intra-chr q33 Oncogene Tumor suppressor gene q34 Seq+ 21590 ChimerSeq STARFusion TCGA_RNA-Seq TRIM24-SVOPL TRIM24 chr7 138255748 + SVOPL chr7 138281275 - Exonic hg19 BRCA TCGA-C8-A1HM-01A 4 135 In-Frame Intra-chr q33 Oncogene Tumor suppressor gene q34 Seq+ 21591 ChimerSeq STARFusion TCGA_RNA-Seq CREB3L2-SHANK2 CREB3L2 chr7 137686350 - SHANK2 chr11 70349036 - Exonic hg19 BRCA TCGA-C8-A1HM-01A 2 8 In-Frame Inter-chr q33 Transcription factor q13.4 Seq+ 21592 ChimerSeq STARFusion TCGA_RNA-Seq SUZ12P-LRRC37BP1 SUZ12P chr17 29096983 + LRRC37BP1 chr17 28956698 + Exonic hg19 BRCA TCGA-OL-A6VQ 4 7 Out-of-frame Intra-chr q11.2 21593 ChimerSeq STARFusion TCGA_RNA-Seq APLP2-KCNJ5 APLP2 chr11 129939977 + KCNJ5 chr11 128781159 + Exonic hg19 BRCA TCGA-AN-A0FS-01A 14 23 5'UTR-5'UTR Intra-chr q24.3 q24.3 Seq+ 21594 ChimerSeq STARFusion TCGA_RNA-Seq COMMD1-B3GNT2 COMMD1 chr2 62228117 + B3GNT2 chr2 62449347 + Exonic hg19 BRCA TCGA-AN-A0FS-01A 2 1 CDS-5'UTR Intra-chr p15 p15 21595 ChimerSeq STARFusion TCGA_RNA-Seq FANK1-ZRANB1 FANK1 chr10 127585224 + ZRANB1 chr10 126670278 + Exonic hg19 BRCA TCGA-AN-A0FS-01A 2 0 Out-of-frame Intra-chr q26.2 q26.13 21596 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-HNRNPU YWHAE chr17 1303341 - HNRNPU chr1 245026032 - Exonic hg19 BRCA TCGA-BH-A0W5-01A 2 1 In-Frame Inter-chr p13.3 q44 21597 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-CPT1A FCHSD2 chr11 72794740 - CPT1A chr11 68562379 - Exonic hg19 BRCA TCGA-BH-A18I-01A 14 160 In-Frame Intra-chr q13.4 q13.3 Seq+ 21598 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-CPT1A FCHSD2 chr11 72794740 - CPT1A chr11 68564401 - Exonic hg19 BRCA TCGA-BH-A18I-01A 8 160 In-Frame Intra-chr q13.4 q13.3 Seq+ 21599 ChimerSeq STARFusion TCGA_RNA-Seq LOC652276-LEUTX LOC652276 chr16 2653728 + LEUTX chr19 40275167 + Exonic hg19 BRCA TCGA-BH-A18I-01A 13 29 5'UTR-5'UTR Inter-chr Transcription factor 21600 ChimerSeq STARFusion TCGA_RNA-Seq BAG4-PLEKHA2 BAG4 chr8 38065284 + PLEKHA2 chr8 38775425 + Exonic hg19 BRCA TCGA-BH-A18I-01A 6 23 CDS-5'UTR Intra-chr p11.23 p11.22 Seq+ 21601 ChimerSeq STARFusion TCGA_RNA-Seq LOC96610-PELI1 LOC96610 chr22 22677323 + PELI1 chr2 64371545 - Exonic hg19 BRCA TCGA-BH-A18I-01A 7 0 Out-of-frame Inter-chr p14 21602 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-PLN PTPRK chr6 128643184 - PLN chr6 118879988 + Exonic hg19 BRCA TCGA-BH-A18I-01A 2 4 CDS-5'UTR Intra-chr Tumor suppressor gene q22.31 Seq+ 21603 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 BRCA TCGA-BH-A18I-01A 2 0 In-Frame Intra-chr p11.21 p11.21 21604 ChimerSeq STARFusion TCGA_RNA-Seq GTF3C6-LACE1 GTF3C6 chr6 111280455 + LACE1 chr6 108831415 + Exonic hg19 BRCA TCGA-E2-A14S-01A 30 72 In-Frame Intra-chr q21 Seq+ 21605 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-ARHGAP32 PPFIA1 chr11 70118542 + ARHGAP32 chr11 128963602 - Exonic hg19 BRCA TCGA-E2-A14S-01A 18 62 In-Frame Intra-chr q13.3 q24.3 Seq+ 21606 ChimerSeq STARFusion TCGA_RNA-Seq SPIDR-BAGE2 SPIDR chr8 48206619 + BAGE2 chr21 11058323 - Exonic hg19 BRCA TCGA-E2-A14S-01A 10 8 Out-of-frame Inter-chr q11.21 p11.2 21607 ChimerSeq STARFusion TCGA_RNA-Seq C22orf29-HIRA C22orf29 chr22 19841966 - HIRA chr22 19319079 - Exonic hg19 BRCA TCGA-B6-A0WW-01A 2 7 5'UTR-CDS Intra-chr q11.21 q11.21 Tumor suppressor gene Seq+ 21608 ChimerSeq STARFusion TCGA_RNA-Seq GNB1L-HIRA GNB1L chr22 19841966 - HIRA chr22 19319079 - Exonic hg19 BRCA TCGA-B6-A0WW-01A 2 7 5'UTR-CDS Intra-chr q11.21 q11.21 Tumor suppressor gene Seq+ 21609 ChimerSeq STARFusion TCGA_RNA-Seq MICAL3-ADRBK2 MICAL3 chr22 18484159 - ADRBK2 chr22 26057543 + Exonic hg19 BRCA TCGA-B6-A0WW-01A 2 6 5'UTR-CDS Intra-chr q11.21 21610 ChimerSeq STARFusion TCGA_RNA-Seq ZNF732-DAB1 ZNF732 chr4 289227 - DAB1 chr1 57611102 - Exonic hg19 BRCA TCGA-A2-A3Y0-01A 6 70 In-Frame Inter-chr p16.3 Transcription factor p32.1 Seq+ 21611 ChimerSeq STARFusion TCGA_RNA-Seq SPTBN2-FGF19 SPTBN2 chr11 66453869 - FGF19 chr11 69514344 - Exonic hg19 BRCA TCGA-A2-A3Y0-01A 12 45 In-Frame Intra-chr q13.2 q13.3 Seq+ 21612 ChimerSeq STARFusion TCGA_RNA-Seq MIR1204-PVT1 MIR1204 chr8 128808254 + PVT1 chr8 129001408 + Exonic hg19 BRCA TCGA-A2-A3Y0-01A 10 20 5'UTR-5'UTR Intra-chr q24.21 q24.21 21613 ChimerSeq STARFusion TCGA_RNA-Seq TCF12-TMEM255B TCF12 chr15 57555472 + TMEM255B chr13 114469088 + Exonic hg19 BRCA TCGA-A2-A3Y0-01A 5 5 Out-of-frame Inter-chr q21.3 Oncogene Transcription factor Seq+ 21614 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80950355 - MRPS28 chr8 80831383 - Exonic hg19 BRCA TCGA-A2-A3Y0-01A 3 3 Out-of-frame Intra-chr q21.13 q21.13 21615 ChimerSeq STARFusion TCGA_RNA-Seq H1FX-S100A9 H1FX chr3 129034555 - S100A9 chr1 153332968 + Exonic hg19 BRCA TCGA-A2-A3Y0-01A 3 2 Out-of-frame Inter-chr q21.3 q21.3 21616 ChimerSeq STARFusion TCGA_RNA-Seq PTPRA-N4BP1 PTPRA chr20 2998559 + N4BP1 chr16 48596355 - Exonic hg19 BRCA TCGA-A2-A3Y0-01A 2 6 In-Frame Inter-chr p13 q12.1 Seq+ 21617 ChimerSeq STARFusion TCGA_RNA-Seq TOM1L1-STXBP4 TOM1L1 chr17 52982928 + STXBP4 chr17 53108529 + Exonic hg19 BRCA TCGA-A2-A3Y0-01A 2 2 In-Frame Intra-chr q22 q22 21618 ChimerSeq STARFusion TCGA_RNA-Seq DERA-LRP6 DERA chr12 16135370 + LRP6 chr12 12302087 - Exonic hg19 BRCA TCGA-EW-A1J6-01A 2 16 Out-of-frame Intra-chr p12.3 Seq+ 21619 ChimerSeq STARFusion TCGA_RNA-Seq C9orf91-STX17 C9orf91 chr9 117379581 + STX17 chr9 102677460 + Exonic hg19 BRCA TCGA-EW-A1J6-01A 2 0 CDS-5'UTR Intra-chr q31.1 21620 ChimerSeq STARFusion TCGA_RNA-Seq THSD4-LRRC49 THSD4 chr15 71447271 + LRRC49 chr15 71329518 + Exonic hg19 BRCA TCGA-GI-A2C8-01A 94 329 Out-of-frame Intra-chr q23 q23 Seq+ 21621 ChimerSeq STARFusion TCGA_RNA-Seq MYO1D-TEX2 MYO1D chr17 31203796 - TEX2 chr17 62248559 - Exonic hg19 BRCA TCGA-GI-A2C8-01A 77 234 Out-of-frame Intra-chr q11.2 q23.3 Seq+ 21622 ChimerSeq STARFusion TCGA_RNA-Seq BRWD1-LINC00114 BRWD1 chr21 40684767 - LINC00114 chr21 40112338 - Exonic hg19 BRCA TCGA-GI-A2C8-01A 42 182 CDS-3'UTR Intra-chr q22.2 q22.2 Seq+ 21623 ChimerSeq STARFusion TCGA_RNA-Seq PBX1-LRRC52 PBX1 chr1 164532548 + LRRC52 chr1 165532742 + Exonic hg19 BRCA TCGA-GI-A2C8-01A 25 176 In-Frame Intra-chr q23.3 Oncogene Transcription factor q24.1 Seq+ 21624 ChimerSeq STARFusion TCGA_RNA-Seq PBX1-LRRC52 PBX1 chr1 164532548 + LRRC52 chr1 165513908 + Exonic hg19 BRCA TCGA-GI-A2C8-01A 7 176 In-Frame Intra-chr q23.3 Oncogene Transcription factor q24.1 Seq+ 21625 ChimerSeq STARFusion TCGA_RNA-Seq NT5C2-C10orf120 NT5C2 chr10 104934615 - C10orf120 chr10 124459183 - Exonic hg19 BRCA TCGA-GI-A2C8-01A 10 18 Out-of-frame Intra-chr q24.33 q26.13 Seq+ 21626 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-FAM222B TANC2 chr17 61151375 + FAM222B chr17 27093725 - Exonic hg19 BRCA TCGA-GI-A2C8-01A 4 25 CDS-5'UTR Intra-chr q23.2 q11.2 Seq+ 21627 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-FAM222B TANC2 chr17 61151375 + FAM222B chr17 27161344 - Exonic hg19 BRCA TCGA-GI-A2C8-01A 2 25 CDS-5'UTR Intra-chr q23.2 q11.2 Seq+ 21628 ChimerSeq STARFusion TCGA_RNA-Seq RRM2B-ZFPM2 RRM2B chr8 103231042 - ZFPM2 chr8 106431372 + Exonic hg19 BRCA TCGA-GI-A2C8-01A 3 6 Out-of-frame Intra-chr q22.3 q22.3 Transcription factor Seq+ 21629 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-ANGPT1 TPD52 chr8 81083660 - ANGPT1 chr8 108334356 - Exonic hg19 BRCA TCGA-GI-A2C8-01A 3 5 Out-of-frame Intra-chr q21.13 q23.1 Seq+ 21630 ChimerSeq STARFusion TCGA_RNA-Seq UBXN1-C11orf80 UBXN1 chr11 62444990 - C11orf80 chr11 66583524 + Exonic hg19 BRCA TCGA-GI-A2C8-01A 2 9 Out-of-frame Intra-chr q12.3 q13.2 Seq+ 21631 ChimerSeq STARFusion TCGA_RNA-Seq PDLIM1-SORBS1 PDLIM1 chr10 97050577 - SORBS1 chr10 97170534 - Exonic hg19 BRCA TCGA-GI-A2C8-01A 2 8 In-Frame Intra-chr q23.33 q24.1 Seq+ 21632 ChimerSeq STARFusion TCGA_RNA-Seq MAP2K4-CD79B MAP2K4 chr17 11958308 + CD79B chr17 62008745 - Exonic hg19 BRCA TCGA-GI-A2C8-01A 3 3 Out-of-frame Intra-chr p12 STE:STE7 Oncogene Tumor suppressor gene q23.3 Oncogene Seq+ 21633 ChimerSeq STARFusion TCGA_RNA-Seq MAP2K4-CD79B MAP2K4 chr17 11924318 + CD79B chr17 62008748 - Exonic hg19 BRCA TCGA-GI-A2C8-01A 3 3 In-Frame Intra-chr p12 STE:STE7 Oncogene Tumor suppressor gene q23.3 Oncogene Seq+ 21634 ChimerSeq STARFusion TCGA_RNA-Seq TMEM223-STX5 TMEM223 chr11 62559151 - STX5 chr11 62575100 - Exonic hg19 BRCA TCGA-AN-A0FL-01A 23 97 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 21635 ChimerSeq STARFusion TCGA_RNA-Seq SLPI-MATN4 SLPI chr20 43883100 - MATN4 chr20 43934256 - Exonic hg19 BRCA TCGA-AN-A0FL-01A 8 21 CDS-5'UTR Intra-chr q13.12 q13.12 Seq+ 21636 ChimerSeq STARFusion TCGA_RNA-Seq PKP4-UPP2 PKP4 chr2 159313730 + UPP2 chr2 158851692 + Exonic hg19 BRCA TCGA-AN-A0FL-01A 4 10 5'UTR-5'UTR Intra-chr q24.1 q24.1 21637 ChimerSeq STARFusion TCGA_RNA-Seq CEP70-COPB2 CEP70 chr3 138289160 - COPB2 chr3 139102277 - Exonic hg19 BRCA TCGA-AN-A0FL-01A 2 12 In-Frame Intra-chr q22.3 q23 Seq+ 21638 ChimerSeq STARFusion TCGA_RNA-Seq RNF185-SMTN RNF185 chr22 31591567 + SMTN chr22 31476436 + Exonic hg19 BRCA TCGA-AN-A0FL-01A 2 6 5'UTR-5'UTR Intra-chr q12.2 q12.2 Seq+ 21639 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS3-IGKC TMPRSS3 chr21 43803729 - IGKC chr2 89160429 - Exonic hg19 BRCA TCGA-E2-A14X-01A 644 2 Out-of-frame Inter-chr q22.3 p11.2 21640 ChimerSeq STARFusion TCGA_RNA-Seq MUC5B-IGKC MUC5B chr11 1253401 + IGKC chr2 89161431 - Exonic hg19 BRCA TCGA-E2-A14X-01A 76 1 Out-of-frame Inter-chr p15.5 p11.2 21641 ChimerSeq STARFusion TCGA_RNA-Seq STAG1-MSL2 STAG1 chr3 136323151 - MSL2 chr3 135871580 - Exonic hg19 BRCA TCGA-E2-A14X-01A 4 15 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 21642 ChimerSeq STARFusion TCGA_RNA-Seq RLF-ZMPSTE24 RLF chr1 40627308 + ZMPSTE24 chr1 40756526 + Exonic hg19 BRCA TCGA-EW-A1P7-01A 10 77 In-Frame Intra-chr p34.2 Transcription factor p34.2 Seq+ 21643 ChimerSeq STARFusion TCGA_RNA-Seq RLF-ZMPSTE24 RLF chr1 40627308 + ZMPSTE24 chr1 40758117 + Exonic hg19 BRCA TCGA-EW-A1P7-01A 3 77 In-Frame Intra-chr p34.2 Transcription factor p34.2 Seq+ 21644 ChimerSeq STARFusion TCGA_RNA-Seq TLK1-CAT TLK1 chr2 171974249 - CAT chr11 34470739 + Exonic hg19 BRCA TCGA-EW-A1P7-01A 3 15 In-Frame Inter-chr q31.1 Other:TLK p13 Tumor suppressor gene Seq+ 21645 ChimerSeq STARFusion TCGA_RNA-Seq DIP2C-IGLL5 DIP2C chr10 486818 - IGLL5 chr22 23235962 + Exonic hg19 BRCA TCGA-EW-A1P7-01A 3 1 Out-of-frame Inter-chr p15.3 q11.22 21646 ChimerSeq STARFusion TCGA_RNA-Seq SCD-GPR19 SCD chr10 102108103 + GPR19 chr12 12815404 - Exonic hg19 BRCA TCGA-A8-A07I-01A 26 122 CDS-5'UTR Inter-chr q24.31 p13.1 Seq+ 21647 ChimerSeq STARFusion TCGA_RNA-Seq SPOP-XYLT2 SPOP chr17 47755295 - XYLT2 chr17 48430991 + Exonic hg19 BRCA TCGA-A8-A07I-01A 7 35 5'UTR-CDS Intra-chr q21.33 Oncogene Tumor suppressor gene q21.33 Seq+ 21648 ChimerSeq STARFusion TCGA_RNA-Seq ACSF2-SPAG9 ACSF2 chr17 48503750 + SPAG9 chr17 49091714 - Exonic hg19 BRCA TCGA-A8-A07I-01A 6 29 In-Frame Intra-chr q21.33 q21.33 Seq+ 21649 ChimerSeq STARFusion TCGA_RNA-Seq CDK8-IKZF3 CDK8 chr13 26828906 + IKZF3 chr17 37988404 - Exonic hg19 BRCA TCGA-A8-A07I-01A 7 22 Out-of-frame Inter-chr q12.13 CMGC:CDK Oncogene q21.1 Tumor suppressor gene Transcription factor Seq+ 21650 ChimerSeq STARFusion TCGA_RNA-Seq SPOP-XYLT2 SPOP chr17 47745389 - XYLT2 chr17 48430991 + Exonic hg19 BRCA TCGA-A8-A07I-01A 2 35 5'UTR-CDS Intra-chr q21.33 Oncogene Tumor suppressor gene q21.33 Seq+ 21651 ChimerSeq STARFusion TCGA_RNA-Seq AKAP1-ANKFN1 AKAP1 chr17 55162759 + ANKFN1 chr17 54428127 + Exonic hg19 BRCA TCGA-A8-A07I-01A 6 4 5'UTR-CDS Intra-chr q22 q22 Seq+ 21652 ChimerSeq STARFusion TCGA_RNA-Seq ARRDC1-EHMT1 ARRDC1 chr9 140500287 + EHMT1 chr9 140605419 + Exonic hg19 BRCA TCGA-A8-A07I-01A 3 8 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 21653 ChimerSeq STARFusion TCGA_RNA-Seq ADCK2-DPP6 ADCK2 chr7 140390613 + DPP6 chr7 154429531 + Exonic hg19 BRCA TCGA-A8-A07I-01A 2 3 In-Frame Intra-chr q34 Atypical:ABC1 Seq+ 21654 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA2-SHANK2 PLEKHA2 chr8 38775588 + SHANK2 chr11 70349036 - Exonic hg19 BRCA TCGA-D8-A1XF-01A 3 7 In-Frame Inter-chr p11.22 q13.4 Seq+ 21655 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 BRCA TCGA-D8-A1XF-01A 2 1 CDS-5'UTR Intra-chr p12 p12 Transcription factor 21656 ChimerSeq STARFusion TCGA_RNA-Seq PTBP2-KAZN PTBP2 chr1 97189150 + KAZN chr1 15361245 + Exonic hg19 BRCA TCGA-BH-A1FC-01A 55 132 Out-of-frame Intra-chr p21.3 p36.21 Seq+ 21657 ChimerSeq STARFusion TCGA_RNA-Seq RNF11-TMEM61 RNF11 chr1 51702551 + TMEM61 chr1 55457509 + Exonic hg19 BRCA TCGA-BH-A1FC-01A 19 140 Out-of-frame Intra-chr p32.3 p32.3 Seq+ 21658 ChimerSeq STARFusion TCGA_RNA-Seq MYO10-LOC100130744 MYO10 chr5 16694480 - LOC100130744 chr5 14712831 + Exonic hg19 BRCA TCGA-BH-A1FC-01A 8 22 CDS-5'UTR Intra-chr p15.1 21659 ChimerSeq STARFusion TCGA_RNA-Seq FAF1-NFIA FAF1 chr1 51425439 - NFIA chr1 61818122 + Exonic hg19 BRCA TCGA-BH-A1FC-01A 10 12 Out-of-frame Intra-chr p32.3 p31.3 Transcription factor Seq+ 21660 ChimerSeq STARFusion TCGA_RNA-Seq ST3GAL3-TAL1 ST3GAL3 chr1 44303983 + TAL1 chr1 47685846 - Exonic hg19 BRCA TCGA-BH-A1FC-01A 5 21 Out-of-frame Intra-chr p34.1 p33 Oncogene Transcription factor Seq+ 21661 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2IP-SREK1 ERBB2IP chr5 65222634 + SREK1 chr5 65449291 + Exonic hg19 BRCA TCGA-BH-A1FC-01A 5 15 5'UTR-5'UTR Intra-chr q12.3 Seq+ 21662 ChimerSeq STARFusion TCGA_RNA-Seq CACHD1-CLIC4 CACHD1 chr1 64936625 + CLIC4 chr1 25124233 + Exonic hg19 BRCA TCGA-BH-A1FC-01A 4 14 In-Frame Intra-chr p31.3 p36.11 Seq+ 21663 ChimerSeq STARFusion TCGA_RNA-Seq ST3GAL3-TAL1 ST3GAL3 chr1 44345179 + TAL1 chr1 47685846 - Exonic hg19 BRCA TCGA-BH-A1FC-01A 2 21 Out-of-frame Intra-chr p34.1 p33 Oncogene Transcription factor Seq+ 21664 ChimerSeq STARFusion TCGA_RNA-Seq ALG14-C1orf194 ALG14 chr1 95492685 - C1orf194 chr1 109649281 - Exonic hg19 BRCA TCGA-BH-A1FC-01A 4 7 Out-of-frame Intra-chr p21.3 p13.3 Seq+ 21665 ChimerSeq STARFusion TCGA_RNA-Seq RALGAPB-RPRD1B RALGAPB chr20 37137851 + RPRD1B chr20 36694483 + Exonic hg19 BRCA TCGA-BH-A1FC-01A 2 10 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 21666 ChimerSeq STARFusion TCGA_RNA-Seq RALGAPB-RPRD1B RALGAPB chr20 37145013 + RPRD1B chr20 36694483 + Exonic hg19 BRCA TCGA-BH-A1FC-01A 2 10 In-Frame Intra-chr q11.23 q11.23 Seq+ 21667 ChimerSeq STARFusion TCGA_RNA-Seq HIATL2-ZNF782 HIATL2 chr9 99721117 - ZNF782 chr9 99614287 - Exonic hg19 BRCA TCGA-BH-A1FC-01A 3 3 3'UTR-5'UTR Intra-chr q22.33 Transcription factor 21668 ChimerSeq STARFusion TCGA_RNA-Seq KLF16-RNF126 KLF16 chr19 1863040 - RNF126 chr19 652884 - Exonic hg19 BRCA TCGA-BH-A1FC-01A 2 3 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 21669 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1-IDUA WHSC1 chr4 1873269 + IDUA chr4 981597 + Exonic hg19 BRCA TCGA-BH-A1FC-01A 2 3 5'UTR-CDS Intra-chr Oncogene p16.3 Seq+ 21670 ChimerSeq STARFusion TCGA_RNA-Seq TYMS-SEPT9 TYMS chr18 662320 + SEPT9 chr17 75483506 + Exonic hg19 BRCA TCGA-BH-A1FC-01A 2 0 3'UTR-CDS Inter-chr p11.32 21671 ChimerSeq STARFusion TCGA_RNA-Seq TOM1L2-PEMT TOM1L2 chr17 17796975 - PEMT chr17 17480341 - Exonic hg19 BRCA TCGA-OL-A66O-01A 3 13 In-Frame Intra-chr p11.2 Tumor suppressor gene p11.2 Seq+ 21672 ChimerSeq STARFusion TCGA_RNA-Seq NSMCE4A-ATE1 NSMCE4A chr10 123724801 - ATE1 chr10 123503373 - Exonic hg19 BRCA TCGA-D8-A142-01A 477 1705 Out-of-frame Intra-chr q26.13 q26.13 Seq+ 21673 ChimerSeq STARFusion TCGA_RNA-Seq LDLRAD3-ELP4 LDLRAD3 chr11 35965694 + ELP4 chr11 31804941 + Exonic hg19 BRCA TCGA-D8-A142-01A 23 35 Out-of-frame Intra-chr p13 p13 Seq+ 21674 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK2-RMDN2 EIF2AK2 chr2 37362627 - RMDN2 chr2 38216684 + Exonic hg19 BRCA TCGA-D8-A142-01A 8 41 Out-of-frame Intra-chr p22.2 p22.2 Seq+ 21675 ChimerSeq STARFusion TCGA_RNA-Seq FGFR2-ATE1 FGFR2 chr10 123357476 - ATE1 chr10 123683844 - Exonic hg19 BRCA TCGA-D8-A142-01A 9 36 5'UTR-CDS Intra-chr q26.13 TK:FGFR Oncogene q26.13 Seq+ 21676 ChimerSeq STARFusion TCGA_RNA-Seq FGFR2-ATE1 FGFR2 chr10 123353223 - ATE1 chr10 123503373 - Exonic hg19 BRCA TCGA-D8-A142-01A 3 36 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q26.13 Seq+ 21677 ChimerSeq STARFusion TCGA_RNA-Seq FGFR2-ATE1 FGFR2 chr10 123298106 - ATE1 chr10 123503373 - Exonic hg19 BRCA TCGA-D8-A142-01A 2 36 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q26.13 Seq+ 21678 ChimerSeq STARFusion TCGA_RNA-Seq DYM-CTIF DYM chr18 46956625 - CTIF chr18 46343592 + Exonic hg19 BRCA TCGA-D8-A142-01A 5 15 Out-of-frame Intra-chr q21.1 Seq+ 21679 ChimerSeq STARFusion TCGA_RNA-Seq AKR1E2-WAC AKR1E2 chr10 4884696 + WAC chr10 28872328 + Exonic hg19 BRCA TCGA-D8-A142-01A 2 6 Out-of-frame Intra-chr p15.1 p12.1 Seq+ 21680 ChimerSeq STARFusion TCGA_RNA-Seq MTPAP-CUBN MTPAP chr10 30611320 - CUBN chr10 16867081 - Exonic hg19 BRCA TCGA-D8-A142-01A 2 6 CDS-5'UTR Intra-chr p11.23 p13 Seq+ 21681 ChimerSeq STARFusion TCGA_RNA-Seq PIGN-ATP8B1 PIGN chr18 59821778 - ATP8B1 chr18 55342254 - Exonic hg19 BRCA TCGA-D8-A142-01A 2 0 Out-of-frame Intra-chr q21.33 q21.31 21682 ChimerSeq STARFusion TCGA_RNA-Seq C11orf30-IGH@ C11orf30 chr11 76234289 + IGH@ chr14 106330074 - Exonic hg19 BRCA TCGA-C8-A1HF-01A 33 1 Out-of-frame Inter-chr 32.33 21683 ChimerSeq STARFusion TCGA_RNA-Seq C11orf30-IGHG3 C11orf30 chr11 76234289 + IGHG3 chr14 106330074 - Exonic hg19 BRCA TCGA-C8-A1HF-01A 33 1 Out-of-frame Inter-chr 21684 ChimerSeq STARFusion TCGA_RNA-Seq SGPP2-ALG14 SGPP2 chr2 223389752 + ALG14 chr1 95492816 - Exonic hg19 BRCA TCGA-B6-A0RE-01A 9 34 In-Frame Inter-chr q36.1 p21.3 Seq+ 21685 ChimerSeq STARFusion TCGA_RNA-Seq CD9-PBXIP1 CD9 chr12 6309731 + PBXIP1 chr1 154917593 - Exonic hg19 BRCA TCGA-B6-A0RE-01A 13 16 Out-of-frame Inter-chr p13.31 q21.3 Seq+ 21686 ChimerSeq STARFusion TCGA_RNA-Seq TM2D2-ADAM9 TM2D2 chr8 38853732 - ADAM9 chr8 38865405 + Exonic hg19 BRCA TCGA-B6-A0RE-01A 7 9 Out-of-frame Intra-chr p11.22 Seq+ 21687 ChimerSeq STARFusion TCGA_RNA-Seq CD9-LOC100505666 CD9 chr12 6309731 + LOC100505666 chr1 155021837 - Exonic hg19 BRCA TCGA-B6-A0RE-01A 4 13 CDS-3'UTR Inter-chr p13.31 Seq+ 21688 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-TRAP1 CREBBP chr16 3817721 - TRAP1 chr16 3716119 - Exonic hg19 BRCA TCGA-B6-A0RE-01A 4 8 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 21689 ChimerSeq STARFusion TCGA_RNA-Seq TMEM45B-BARX2 TMEM45B chr11 129685793 + BARX2 chr11 129306646 + Exonic hg19 BRCA TCGA-B6-A0RE-01A 4 5 5'UTR-CDS Intra-chr q24.3 q24.3 Transcription factor Seq+ 21690 ChimerSeq STARFusion TCGA_RNA-Seq PBXIP1-LOC338817 PBXIP1 chr1 154918048 - LOC338817 chr12 11705514 + Exonic hg19 BRCA TCGA-B6-A0RE-01A 2 11 CDS-5'UTR Inter-chr q21.3 21691 ChimerSeq STARFusion TCGA_RNA-Seq MYO18A-NUFIP2 MYO18A chr17 27492960 - NUFIP2 chr17 27594548 - Exonic hg19 BRCA TCGA-B6-A0RE-01A 3 4 Out-of-frame Intra-chr q11.2 Oncogene q11.2 Seq+ 21692 ChimerSeq STARFusion TCGA_RNA-Seq LTV1-ATG5 LTV1 chr6 144167361 + ATG5 chr6 106649964 - Exonic hg19 BRCA TCGA-E9-A248-01A 139 337 In-Frame Intra-chr q24.2 q21 Seq+ 21693 ChimerSeq STARFusion TCGA_RNA-Seq ARID1B-PLEKHG1 ARID1B chr6 157256710 + PLEKHG1 chr6 151089774 + Exonic hg19 BRCA TCGA-E9-A248-01A 29 204 In-Frame Intra-chr q25.3 Oncogene q25.1 Seq+ 21694 ChimerSeq STARFusion TCGA_RNA-Seq SYNJ2-ZDHHC14 SYNJ2 chr6 158403120 + ZDHHC14 chr6 157963617 + Exonic hg19 BRCA TCGA-E9-A248-01A 35 97 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 21695 ChimerSeq STARFusion TCGA_RNA-Seq LIN28B-USP45 LIN28B chr6 105406161 + USP45 chr6 99924106 - Exonic hg19 BRCA TCGA-E9-A248-01A 3 15 Out-of-frame Intra-chr q16.3 Transcription factor q16.2 Seq+ 21696 ChimerSeq STARFusion TCGA_RNA-Seq PLD3-SIRT2 PLD3 chr19 40854675 + SIRT2 chr19 39384507 - Exonic hg19 BRCA TCGA-E9-A248-01A 3 13 5'UTR-5'UTR Intra-chr q13.2 Tumor suppressor gene Seq+ 21697 ChimerSeq STARFusion TCGA_RNA-Seq TBCD-FOXK2 TBCD chr17 80828256 + FOXK2 chr17 80521230 + Exonic hg19 BRCA TCGA-E9-A248-01A 5 4 In-Frame Intra-chr q25.3 Transcription factor Seq+ 21698 ChimerSeq STARFusion TCGA_RNA-Seq LIN28B-USP45 LIN28B chr6 105406161 + USP45 chr6 99930759 - Exonic hg19 BRCA TCGA-E9-A248-01A 2 15 In-Frame Intra-chr q16.3 Transcription factor q16.2 Seq+ 21699 ChimerSeq STARFusion TCGA_RNA-Seq SYNJ2-CDK19 SYNJ2 chr6 158487667 + CDK19 chr6 111067404 - Exonic hg19 BRCA TCGA-E9-A248-01A 3 6 Out-of-frame Intra-chr q25.3 q21 Seq+ 21700 ChimerSeq STARFusion TCGA_RNA-Seq C10orf76-PRKG1 C10orf76 chr10 103815842 - PRKG1 chr10 54031110 + Exonic hg19 BRCA TCGA-E9-A248-01A 2 5 5'UTR-CDS Intra-chr q24.32 q11.23 Seq+ 21701 ChimerSeq STARFusion TCGA_RNA-Seq MTHFD1L-THEMIS MTHFD1L chr6 151187185 + THEMIS chr6 128176333 - Exonic hg19 BRCA TCGA-E9-A248-01A 2 2 Out-of-frame Intra-chr q25.1 Seq+ 21702 ChimerSeq STARFusion TCGA_RNA-Seq USP37-ASF1B USP37 chr2 219394679 - ASF1B chr19 14231477 - Exonic hg19 BRCA TCGA-E9-A248-01A 2 0 Out-of-frame Inter-chr q35 p13.12 21703 ChimerSeq STARFusion TCGA_RNA-Seq TUT1-BSCL2 TUT1 chr11 62356503 - BSCL2 chr11 62462183 - Exonic hg19 BRCA TCGA-B6-A0I1-01A 90 353 In-Frame Intra-chr q12.3 q12.3 Seq+ 21704 ChimerSeq STARFusion TCGA_RNA-Seq SCARB1-DHX37 SCARB1 chr12 125348141 - DHX37 chr12 125462036 - Exonic hg19 BRCA TCGA-B6-A0I1-01A 9 32 In-Frame Intra-chr q24.31 q24.31 Seq+ 21705 ChimerSeq STARFusion TCGA_RNA-Seq ELF5-CAT ELF5 chr11 34515026 - CAT chr11 34485652 + Exonic hg19 BRCA TCGA-B6-A0I1-01A 6 18 In-Frame Intra-chr p13 Transcription factor p13 Tumor suppressor gene Seq+ 21706 ChimerSeq STARFusion TCGA_RNA-Seq ELF2-NR1I3 ELF2 chr4 140005287 - NR1I3 chr1 161207973 - Exonic hg19 BRCA TCGA-B6-A0I1-01A 3 22 CDS-5'UTR Inter-chr q31.1 Transcription factor q23.3 Transcription factor Seq+ 21707 ChimerSeq STARFusion TCGA_RNA-Seq FRMD8-MAST1 FRMD8 chr11 65164491 + MAST1 chr19 12969176 + Exonic hg19 BRCA TCGA-B6-A0I1-01A 3 22 Out-of-frame Inter-chr q13.1 p13.13 AGC:MAST Seq+ 21708 ChimerSeq STARFusion TCGA_RNA-Seq TIMM50-IFNL1 TIMM50 chr19 39973796 + IFNL1 chr19 39787445 + Exonic hg19 BRCA TCGA-B6-A0I1-01A 3 14 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 21709 ChimerSeq STARFusion TCGA_RNA-Seq MAN1A2-TTF2 MAN1A2 chr1 117963271 + TTF2 chr1 117639973 + Exonic hg19 BRCA TCGA-B6-A0I1-01A 4 9 In-Frame Intra-chr p12 p13.1 Seq+ 21710 ChimerSeq STARFusion TCGA_RNA-Seq C11orf80-KDM2A C11orf80 chr11 66583670 + KDM2A chr11 67015752 + Exonic hg19 BRCA TCGA-B6-A0I1-01A 2 16 Out-of-frame Intra-chr q13.2 q13.2 Transcription factor Seq+ 21711 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-CS PVT1 chr8 128903244 + CS chr12 56669979 - Exonic hg19 BRCA TCGA-B6-A0I1-01A 3 6 5'UTR-CDS Inter-chr q24.21 q13.3 Seq+ 21712 ChimerSeq STARFusion TCGA_RNA-Seq RNH1-DEAF1 RNH1 chr11 507113 - DEAF1 chr11 644654 - Exonic hg19 BRCA TCGA-B6-A0I1-01A 3 6 5'UTR-CDS Intra-chr Tumor suppressor gene Transcription factor Seq+ 21713 ChimerSeq STARFusion TCGA_RNA-Seq IFFO2-UBR4 IFFO2 chr1 19282162 - UBR4 chr1 19411192 - Exonic hg19 BRCA TCGA-B6-A0I1-01A 3 3 In-Frame Intra-chr p36.13 p36.13 Seq+ 21714 ChimerSeq STARFusion TCGA_RNA-Seq MGST3-SLAMF7 MGST3 chr1 165600530 + SLAMF7 chr1 160717984 + Exonic hg19 BRCA TCGA-B6-A0I1-01A 2 7 5'UTR-CDS Intra-chr q24.1 q23.3 Seq+ 21715 ChimerSeq STARFusion TCGA_RNA-Seq PRRG2-CCDC155 PRRG2 chr19 50086974 + CCDC155 chr19 49912224 + Exonic hg19 BRCA TCGA-B6-A0I1-01A 2 7 In-Frame Intra-chr q13.33 q13.33 Seq+ 21716 ChimerSeq STARFusion TCGA_RNA-Seq LTBP1-TTC27 LTBP1 chr2 33174012 + TTC27 chr2 33042524 + Exonic hg19 BRCA TCGA-B6-A0I1-01A 3 2 In-Frame Intra-chr p22.3 p22.3 Seq+ 21717 ChimerSeq STARFusion TCGA_RNA-Seq SCRN2-SKAP1 SCRN2 chr17 45915636 - SKAP1 chr17 46211178 - Exonic hg19 BRCA TCGA-B6-A0I1-01A 3 2 CDS-3'UTR Intra-chr q21.32 q21.32 Seq+ 21718 ChimerSeq STARFusion TCGA_RNA-Seq GMDS-METTL24 GMDS chr6 1930337 - METTL24 chr6 110644075 - Exonic hg19 BRCA TCGA-B6-A0I1-01A 2 5 In-Frame Intra-chr p25.3 q21 Seq+ 21719 ChimerSeq STARFusion TCGA_RNA-Seq RARA-ZPBP2 RARA chr17 38487648 + ZPBP2 chr17 38031507 + Exonic hg19 BRCA TCGA-B6-A0I1-01A 2 1 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q21.1 21720 ChimerSeq STARFusion TCGA_RNA-Seq SLC6A6-FGD5 SLC6A6 chr3 14457961 + FGD5 chr3 14905635 + Exonic hg19 BRCA TCGA-AC-A7VB-01A 14 9 5'UTR-CDS Intra-chr p25.1 p25.1 Seq+ 21721 ChimerSeq STARFusion TCGA_RNA-Seq ELL-INSR ELL chr19 18632731 - INSR chr19 7267907 - Exonic hg19 BRCA TCGA-AC-A7VB-01A 4 34 Out-of-frame Intra-chr p13.11 p13.2 TK:InsR Seq+ 21722 ChimerSeq STARFusion TCGA_RNA-Seq SPDEF-FEV SPDEF chr6 34506129 - FEV chr2 219846821 - Exonic hg19 BRCA TCGA-AC-A7VB-01A 3 1 Out-of-frame Inter-chr p21.31 Transcription factor q35 Transcription factor 21723 ChimerSeq STARFusion TCGA_RNA-Seq ZFC3H1-SHISA9 ZFC3H1 chr12 72036216 - SHISA9 chr16 13297251 + Exonic hg19 BRCA TCGA-AC-A7VB-01A 2 5 In-Frame Inter-chr q21.1 p13.12 Seq+ 21724 ChimerSeq STARFusion TCGA_RNA-Seq MB21D2-FGF12 MB21D2 chr3 192635419 - FGF12 chr3 192078327 - Exonic hg19 BRCA TCGA-AC-A7VB-01A 2 4 In-Frame Intra-chr q29 q29 21725 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 BRCA TCGA-AC-A7VB-01A 3 0 In-Frame Intra-chr p11.21 p11.21 21726 ChimerSeq STARFusion TCGA_RNA-Seq XPO6-GSG1L XPO6 chr16 28112779 - GSG1L chr16 27974524 - Exonic hg19 BRCA TCGA-AC-A7VB-01A 2 2 Out-of-frame Intra-chr p12.1 p12.1 21727 ChimerSeq STARFusion TCGA_RNA-Seq MARK2-FAM168A MARK2 chr11 63607032 + FAM168A chr11 73179537 - Exonic hg19 BRCA TCGA-A7-A4SB-01A 9 49 CDS-5'UTR Intra-chr q13.1 CAMK:CAMKL q13.4 Seq+ 21728 ChimerSeq STARFusion TCGA_RNA-Seq PLXDC2-ST8SIA6 PLXDC2 chr10 20335944 + ST8SIA6 chr10 17432619 - Exonic hg19 BRCA TCGA-A7-A4SB-01A 2 10 Out-of-frame Intra-chr p12.31 p12.33 Seq+ 21729 ChimerSeq STARFusion TCGA_RNA-Seq PLXDC2-ST8SIA6 PLXDC2 chr10 20357168 + ST8SIA6 chr10 17432619 - Exonic hg19 BRCA TCGA-A7-A4SB-01A 2 10 Out-of-frame Intra-chr p12.31 p12.33 Seq+ 21730 ChimerSeq STARFusion TCGA_RNA-Seq PPME1-TENM4 PPME1 chr11 73915490 + TENM4 chr11 78383374 - Exonic hg19 BRCA TCGA-A7-A4SB-01A 2 9 Out-of-frame Intra-chr q13.4 q14.1 Seq+ 21731 ChimerSeq STARFusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23739998 - APOO chrX 23899069 - Exonic hg19 BRCA TCGA-A7-A13D-01A 47 434 In-Frame Intra-chr p22.11 p22.11 Seq+ 21732 ChimerSeq STARFusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23748644 - APOO chrX 23851729 - Exonic hg19 BRCA TCGA-A7-A13D-01A 25 434 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 21733 ChimerSeq STARFusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23761242 - APOO chrX 23851627 - Exonic hg19 BRCA TCGA-A7-A13D-01A 13 434 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 21734 ChimerSeq STARFusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23748644 - APOO chrX 23851627 - Exonic hg19 BRCA TCGA-A7-A13D-01A 13 434 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 21735 ChimerSeq STARFusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23731252 - APOO chrX 23899069 - Exonic hg19 BRCA TCGA-A7-A13D-01A 8 434 Out-of-frame Intra-chr p22.11 p22.11 Seq+ 21736 ChimerSeq STARFusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23761242 - APOO chrX 23851729 - Exonic hg19 BRCA TCGA-A7-A13D-01A 7 434 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 21737 ChimerSeq STARFusion TCGA_RNA-Seq CD59-FBXO3 CD59 chr11 33731752 - FBXO3 chr11 33780147 - Exonic hg19 BRCA TCGA-A7-A13D-01A 53 77 Out-of-frame Intra-chr p13 p13 Seq+ 21738 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-MMP27 TMEM123 chr11 102319543 - MMP27 chr11 102563772 - Exonic hg19 BRCA TCGA-A7-A13D-01A 28 23 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 21739 ChimerSeq STARFusion TCGA_RNA-Seq UNC13D-SRP68 UNC13D chr17 73829047 - SRP68 chr17 74035423 - Exonic hg19 BRCA TCGA-A7-A13D-01A 8 41 CDS-3'UTR Intra-chr q25.1 q25.1 Seq+ 21740 ChimerSeq STARFusion TCGA_RNA-Seq PARN-RRN3 PARN chr16 14711447 - RRN3 chr16 15178562 - Exonic hg19 BRCA TCGA-A7-A13D-01A 12 13 In-Frame Intra-chr p13.11 Seq+ 21741 ChimerSeq STARFusion TCGA_RNA-Seq ARIH2-DHX30 ARIH2 chr3 49011249 + DHX30 chr3 47887190 + Exonic hg19 BRCA TCGA-A7-A13D-01A 9 23 In-Frame Intra-chr p21.31 p21.31 Seq+ 21742 ChimerSeq STARFusion TCGA_RNA-Seq PBX1-DISC1 PBX1 chr1 164532548 + DISC1 chr1 232094574 + Exonic hg19 BRCA TCGA-A7-A13D-01A 4 14 In-Frame Intra-chr q23.3 Oncogene Transcription factor q42.2 Seq+ 21743 ChimerSeq STARFusion TCGA_RNA-Seq FDCSP-CSN1S2AP FDCSP chr4 71091899 + CSN1S2AP chr4 70939833 + Exonic hg19 BRCA TCGA-A7-A13D-01A 5 5 5'UTR-5'UTR Intra-chr q13.3 21744 ChimerSeq STARFusion TCGA_RNA-Seq ASXL1-TM9SF4 ASXL1 chr20 30956926 + TM9SF4 chr20 30720816 + Exonic hg19 BRCA TCGA-A7-A13D-01A 3 12 In-Frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 21745 ChimerSeq STARFusion TCGA_RNA-Seq TCF3-AP3D1 TCF3 chr19 1621837 - AP3D1 chr19 2111827 - Exonic hg19 BRCA TCGA-A7-A13D-01A 4 4 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p13.3 Seq+ 21746 ChimerSeq STARFusion TCGA_RNA-Seq FAM219A-PAX5 FAM219A chr9 34458202 - PAX5 chr9 36923481 - Exonic hg19 BRCA TCGA-A7-A13D-01A 3 7 In-Frame Intra-chr p13.3 p13.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 21747 ChimerSeq STARFusion TCGA_RNA-Seq USP36-TIMP2 USP36 chr17 76834669 - TIMP2 chr17 76870001 - Exonic hg19 BRCA TCGA-A7-A13D-01A 4 2 5'UTR-CDS Intra-chr q25.3 q25.3 21748 ChimerSeq STARFusion TCGA_RNA-Seq MTF2-RPL5 MTF2 chr1 93581175 + RPL5 chr1 93306108 + Exonic hg19 BRCA TCGA-A7-A13D-01A 2 9 Out-of-frame Intra-chr p22.1 Transcription factor p22.1 Tumor suppressor gene Seq+ 21749 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-CLSPN NIPBL chr5 36877280 + CLSPN chr1 36230927 - Exonic hg19 BRCA TCGA-A7-A13D-01A 3 5 5'UTR-CDS Inter-chr p13.2 p34.3 Seq+ 21750 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-MIEN1 FBXL20 chr17 37557614 - MIEN1 chr17 37886544 - Exonic hg19 BRCA TCGA-A7-A13D-01A 3 4 Out-of-frame Intra-chr q12 q12 Seq+ 21751 ChimerSeq STARFusion TCGA_RNA-Seq EXOC6B-SFXN5 EXOC6B chr2 72945232 - SFXN5 chr2 73250343 - Exonic hg19 BRCA TCGA-A7-A13D-01A 2 7 In-Frame Intra-chr p13.2 p13.2 Seq+ 21752 ChimerSeq STARFusion TCGA_RNA-Seq DPP3-PACS1 DPP3 chr11 66264948 + PACS1 chr11 65998019 + Exonic hg19 BRCA TCGA-A7-A13D-01A 2 6 In-Frame Intra-chr q13.2 q13.1 Seq+ 21753 ChimerSeq STARFusion TCGA_RNA-Seq RFT1-DCP1A RFT1 chr3 53137969 - DCP1A chr3 53353500 - Exonic hg19 BRCA TCGA-A7-A13D-01A 3 2 In-Frame Intra-chr p21.1 p21.1 Seq+ 21754 ChimerSeq STARFusion TCGA_RNA-Seq WDR35-PUM2 WDR35 chr2 20130157 - PUM2 chr2 20483247 - Exonic hg19 BRCA TCGA-A7-A13D-01A 3 2 In-Frame Intra-chr p24.1 p24.1 Seq+ 21755 ChimerSeq STARFusion TCGA_RNA-Seq RAB5C-FAM134C RAB5C chr17 40306911 - FAM134C chr17 40737280 - Exonic hg19 BRCA TCGA-A7-A13D-01A 2 5 5'UTR-CDS Intra-chr q21.2 Seq+ 21756 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-RASAL2 RNA45S5 chrUn_gl000220 118621 + RASAL2 chr1 178063648 + Exonic hg19 BRCA TCGA-A7-A13D-01A 3 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene 21757 ChimerSeq STARFusion TCGA_RNA-Seq ZNF395-RNA45S5 ZNF395 chr8 28206730 - RNA45S5 chrUn_gl000220 114028 + Exonic hg19 BRCA TCGA-A7-A13D-01A 3 1 Out-of-frame Inter-chr p21.1 Transcription factor 21758 ChimerSeq STARFusion TCGA_RNA-Seq TTC33-PRKAA1 TTC33 chr5 40728447 - PRKAA1 chr5 40771965 - Exonic hg19 BRCA TCGA-A7-A13D-01A 2 3 In-Frame Intra-chr p13.1 p13.1 Tumor suppressor gene 21759 ChimerSeq STARFusion TCGA_RNA-Seq COL21A1-DST COL21A1 chr6 56029221 - DST chr6 56376198 - Exonic hg19 BRCA TCGA-A7-A13D-01A 2 0 In-Frame Intra-chr p12.1 p12.1 Oncogene Seq+ 21760 ChimerSeq STARFusion TCGA_RNA-Seq PLIN3-ARRDC5 PLIN3 chr19 4859602 - ARRDC5 chr19 4891585 - Exonic hg19 BRCA TCGA-AR-A1AQ-01A 27 73 In-Frame Intra-chr p13.3 p13.3 Seq+ 21761 ChimerSeq STARFusion TCGA_RNA-Seq SBF1-PLXNB2 SBF1 chr22 50899952 - PLXNB2 chr22 50723094 - Exonic hg19 BRCA TCGA-AR-A1AQ-01A 3 5 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 21762 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-APOC1 RNA45S5 chrUn_gl000220 110500 + APOC1 chr19 45422434 + Exonic hg19 BRCA TCGA-AR-A1AQ-01A 3 1 Out-of-frame Inter-chr q13.32 21763 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB12-SLC25A16 DNAJB12 chr10 74114523 - SLC25A16 chr10 70266475 - Exonic hg19 BRCA TCGA-AO-A03V-01A 41 102 In-Frame Intra-chr q22.1 q21.3 Seq+ 21764 ChimerSeq STARFusion TCGA_RNA-Seq ZNF586-SRC ZNF586 chr19 58331313 + SRC chr20 36028518 + Exonic hg19 BRCA TCGA-AO-A03V-01A 14 175 3'UTR-CDS Inter-chr q13.43 Transcription factor q11.23 TK:Src Oncogene Seq+ 21765 ChimerSeq STARFusion TCGA_RNA-Seq ZNF587B-SRC ZNF587B chr19 58331313 + SRC chr20 36028518 + Exonic hg19 BRCA TCGA-AO-A03V-01A 14 145 5'UTR-CDS Inter-chr q13.43 Transcription factor q11.23 TK:Src Oncogene Seq+ 21766 ChimerSeq STARFusion TCGA_RNA-Seq ZNF586-SRC ZNF586 chr19 58288037 + SRC chr20 36028518 + Exonic hg19 BRCA TCGA-AO-A03V-01A 5 173 In-Frame Inter-chr q13.43 Transcription factor q11.23 TK:Src Oncogene Seq+ 21767 ChimerSeq STARFusion TCGA_RNA-Seq BAX-ALDH16A1 BAX chr19 49459590 + ALDH16A1 chr19 49964079 + Exonic hg19 BRCA TCGA-AO-A03V-01A 29 72 Out-of-frame Intra-chr q13.33 Tumor suppressor gene q13.33 Seq+ 21768 ChimerSeq STARFusion TCGA_RNA-Seq ZNF586-SRC ZNF586 chr19 58301768 + SRC chr20 36028518 + Exonic hg19 BRCA TCGA-AO-A03V-01A 3 170 3'UTR-CDS Inter-chr q13.43 Transcription factor q11.23 TK:Src Oncogene Seq+ 21769 ChimerSeq STARFusion TCGA_RNA-Seq ZNF586-SRC ZNF586 chr19 58331917 + SRC chr20 36028518 + Exonic hg19 BRCA TCGA-AO-A03V-01A 3 170 3'UTR-CDS Inter-chr q13.43 Transcription factor q11.23 TK:Src Oncogene Seq+ 21770 ChimerSeq STARFusion TCGA_RNA-Seq ZNF587B-SRC ZNF587B chr19 58331917 + SRC chr20 36028518 + Exonic hg19 BRCA TCGA-AO-A03V-01A 9 145 5'UTR-CDS Inter-chr q13.43 Transcription factor q11.23 TK:Src Oncogene Seq+ 21771 ChimerSeq STARFusion TCGA_RNA-Seq TPRN-TMEM87A TPRN chr9 140098556 - TMEM87A chr15 42503947 - Exonic hg19 BRCA TCGA-AO-A03V-01A 29 42 5'UTR-CDS Inter-chr q34.3 q15.1 Seq+ 21772 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA1-FAM187B PLEKHA1 chr10 124134322 + FAM187B chr19 35716115 - Exonic hg19 BRCA TCGA-AO-A03V-01A 25 30 5'UTR-CDS Inter-chr q26.13 q13.12 Seq+ 21773 ChimerSeq STARFusion TCGA_RNA-Seq UNC13B-DNER UNC13B chr9 35162302 + DNER chr2 230282946 - Exonic hg19 BRCA TCGA-AO-A03V-01A 16 39 In-Frame Inter-chr p13.3 q36.3 Seq+ 21774 ChimerSeq STARFusion TCGA_RNA-Seq SLTM-ATE1 SLTM chr15 59204762 - ATE1 chr10 123503373 - Exonic hg19 BRCA TCGA-AO-A03V-01A 13 44 Out-of-frame Inter-chr q22.1 q26.13 Seq+ 21775 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN9-CACNA1C TSPAN9 chr12 3324521 + CACNA1C chr12 2773991 + Exonic hg19 BRCA TCGA-AO-A03V-01A 15 35 Out-of-frame Intra-chr p13.33 p13.33 Seq+ 21776 ChimerSeq STARFusion TCGA_RNA-Seq SLTM-ATE1 SLTM chr15 59209134 - ATE1 chr10 123503373 - Exonic hg19 BRCA TCGA-AO-A03V-01A 4 43 Out-of-frame Inter-chr q22.1 q26.13 Seq+ 21777 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN9-CACNA1C TSPAN9 chr12 3310422 + CACNA1C chr12 2773991 + Exonic hg19 BRCA TCGA-AO-A03V-01A 6 35 Out-of-frame Intra-chr p13.33 p13.33 Seq+ 21778 ChimerSeq STARFusion TCGA_RNA-Seq BRSK1-HSPBP1 BRSK1 chr19 55795946 + HSPBP1 chr19 55777654 - Exonic hg19 BRCA TCGA-AO-A03V-01A 12 8 In-Frame Intra-chr q13.42 CAMK:CAMKL Tumor suppressor gene q13.42 Seq+ 21779 ChimerSeq STARFusion TCGA_RNA-Seq SGMS1-PARG SGMS1 chr10 52193236 - PARG chr10 51093341 - Exonic hg19 BRCA TCGA-AO-A03V-01A 11 12 5'UTR-CDS Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 21780 ChimerSeq STARFusion TCGA_RNA-Seq RAB22A-NLRP5 RAB22A chr20 56934791 + NLRP5 chr19 56515102 + Exonic hg19 BRCA TCGA-AO-A03V-01A 7 19 Out-of-frame Inter-chr q13.32 q13.43 Seq+ 21781 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R1-AURKC PPP6R1 chr19 55769803 - AURKC chr19 57743401 + Exonic hg19 BRCA TCGA-AO-A03V-01A 4 24 5'UTR-CDS Intra-chr q13.42 q13.43 Oncogene Seq+ 21782 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R1-AURKC PPP6R1 chr19 55769803 - AURKC chr19 57743110 + Exonic hg19 BRCA TCGA-AO-A03V-01A 2 24 5'UTR-5'UTR Intra-chr q13.42 q13.43 Oncogene Seq+ 21783 ChimerSeq STARFusion TCGA_RNA-Seq MGMT-LGI4 MGMT chr10 131334641 + LGI4 chr19 35622764 - Exonic hg19 BRCA TCGA-AO-A03V-01A 2 11 In-Frame Inter-chr q26.3 q13.12 Seq+ 21784 ChimerSeq STARFusion TCGA_RNA-Seq NAIP-OCLN NAIP chr5 70269956 - OCLN chr5 68830521 + Exonic hg19 BRCA TCGA-AO-A03V-01A 2 8 Out-of-frame Intra-chr q13.2 q13.2 21785 ChimerSeq STARFusion TCGA_RNA-Seq CTNNA3-MGMT CTNNA3 chr10 68381450 - MGMT chr10 131334505 + Exonic hg19 BRCA TCGA-AO-A03V-01A 2 5 In-Frame Intra-chr q21.3 Tumor suppressor gene q26.3 Seq+ 21786 ChimerSeq STARFusion TCGA_RNA-Seq HSPBP1-VRK3 HSPBP1 chr19 55785766 - VRK3 chr19 50523904 - Exonic hg19 BRCA TCGA-AO-A03V-01A 2 5 CDS-5'UTR Intra-chr q13.42 q13.33 CK1:VRK Seq+ 21787 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-MTHFD1L ESR1 chr6 152265643 + MTHFD1L chr6 151330955 + Exonic hg19 BRCA TCGA-BH-A5J0-01A 3 35 In-Frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 Seq+ 21788 ChimerSeq STARFusion TCGA_RNA-Seq RAB10-NCOA1 RAB10 chr2 26257604 + NCOA1 chr2 24866835 + Exonic hg19 BRCA TCGA-BH-A5J0-01A 3 12 CDS-5'UTR Intra-chr p23.3 p23.3 Oncogene Transcription factor Seq+ 21789 ChimerSeq STARFusion TCGA_RNA-Seq MRPL33-DTNB MRPL33 chr2 27995559 + DTNB chr2 25705742 - Exonic hg19 BRCA TCGA-BH-A5J0-01A 2 4 In-Frame Intra-chr p23.2 p23.3 21790 ChimerSeq STARFusion TCGA_RNA-Seq NCOA1-CENPA NCOA1 chr2 24905997 + CENPA chr2 27014999 + Exonic hg19 BRCA TCGA-BH-A5J0-01A 2 2 In-Frame Intra-chr p23.3 Oncogene Transcription factor p23.3 Transcription factor Seq+ 21791 ChimerSeq STARFusion TCGA_RNA-Seq SNHG12-YIPF1 SNHG12 chr1 28908102 - YIPF1 chr1 54325826 - Exonic hg19 BRCA TCGA-LD-A9QF-01A 41 154 3'UTR-3'UTR Intra-chr p35.3 p32.3 Seq+ 21792 ChimerSeq STARFusion TCGA_RNA-Seq MED1-ANKFN1 MED1 chr17 37604051 - ANKFN1 chr17 54305278 + Exonic hg19 BRCA TCGA-LD-A9QF-01A 15 30 In-Frame Intra-chr q12 Tumor suppressor gene q22 Seq+ 21793 ChimerSeq STARFusion TCGA_RNA-Seq MED1-ANKFN1 MED1 chr17 37604051 - ANKFN1 chr17 54262110 + Exonic hg19 BRCA TCGA-LD-A9QF-01A 7 30 Out-of-frame Intra-chr q12 Tumor suppressor gene q22 Seq+ 21794 ChimerSeq STARFusion TCGA_RNA-Seq SPOP-RARA SPOP chr17 47755295 - RARA chr17 38487109 + Exonic hg19 BRCA TCGA-LD-A9QF-01A 3 6 5'UTR-5'UTR Intra-chr q21.33 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor Seq+ 21795 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-IKZF3 STARD3 chr17 37817338 + IKZF3 chr17 37949186 - Exonic hg19 BRCA TCGA-LD-A9QF-01A 2 9 Out-of-frame Intra-chr q12 q21.1 Tumor suppressor gene Transcription factor Seq+ 21796 ChimerSeq STARFusion TCGA_RNA-Seq CDK12-CCL18 CDK12 chr17 37628016 + CCL18 chr17 34397807 + Exonic hg19 BRCA TCGA-LD-A9QF-01A 2 1 Out-of-frame Intra-chr q12 Oncogene q12 21797 ChimerSeq STARFusion TCGA_RNA-Seq TNPO1-GTF2H1 TNPO1 chr5 72201272 + GTF2H1 chr11 18373428 + Exonic hg19 BRCA TCGA-E2-A1L7-01A 3 38 3'UTR-CDS Inter-chr q13.2 p15.1 Seq+ 21798 ChimerSeq STARFusion TCGA_RNA-Seq PBRM1-CACNA2D3 PBRM1 chr3 52637537 - CACNA2D3 chr3 54420742 + Exonic hg19 BRCA TCGA-E2-A1L7-01A 4 15 Out-of-frame Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 Tumor suppressor gene Seq+ 21799 ChimerSeq STARFusion TCGA_RNA-Seq N4BP2L2-LINC00423 N4BP2L2 chr13 33054727 - LINC00423 chr13 33383778 - Exonic hg19 BRCA TCGA-B6-A408-01A 3 35 Out-of-frame Intra-chr q13.1 q13.1 21800 ChimerSeq STARFusion TCGA_RNA-Seq PAWR-PTPRR PAWR chr12 80083509 - PTPRR chr12 71092129 - Exonic hg19 BRCA TCGA-B6-A408-01A 5 26 In-Frame Intra-chr q21.2 Tumor suppressor gene q15 Seq+ 21801 ChimerSeq STARFusion TCGA_RNA-Seq EEF1DP3-N4BP2L1 EEF1DP3 chr13 32520318 + N4BP2L1 chr13 32981909 - Exonic hg19 BRCA TCGA-B6-A408-01A 2 8 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 21802 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 BRCA TCGA-B6-A408-01A 2 2 In-Frame Intra-chr p11.21 p11.21 21803 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-LOC100507412 FBXL20 chr17 37557614 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 140 164 CDS-5'UTR Inter-chr q12 21804 ChimerSeq STARFusion TCGA_RNA-Seq ORMDL3-ZPBP2 ORMDL3 chr17 38080283 - ZPBP2 chr17 38026947 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 62 258 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 21805 ChimerSeq STARFusion TCGA_RNA-Seq ORMDL3-ZPBP2 ORMDL3 chr17 38080283 - ZPBP2 chr17 38029297 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 52 258 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 21806 ChimerSeq STARFusion TCGA_RNA-Seq SNX13-STAP2 SNX13 chr7 17979907 - STAP2 chr19 4334041 - Exonic hg19 BRCA TCGA-B6-A0I9-01A 57 186 In-Frame Inter-chr p21.1 p13.3 Seq+ 21807 ChimerSeq STARFusion TCGA_RNA-Seq TRADD-SLC12A1 TRADD chr16 67193741 - SLC12A1 chr15 48548008 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 84 55 5'UTR-CDS Inter-chr q22.1 q21.1 Seq+ 21808 ChimerSeq STARFusion TCGA_RNA-Seq ORMDL3-ZPBP2 ORMDL3 chr17 38080283 - ZPBP2 chr17 38027717 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 12 258 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 21809 ChimerSeq STARFusion TCGA_RNA-Seq ORMDL3-ZPBP2 ORMDL3 chr17 38080283 - ZPBP2 chr17 38028523 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 7 258 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 21810 ChimerSeq STARFusion TCGA_RNA-Seq SNX13-STAP2 SNX13 chr7 17979907 - STAP2 chr19 4333813 - Exonic hg19 BRCA TCGA-B6-A0I9-01A 12 186 In-Frame Inter-chr p21.1 p13.3 Seq+ 21811 ChimerSeq STARFusion TCGA_RNA-Seq ASTN2-PNMT ASTN2 chr9 120053605 - PNMT chr17 37825882 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 17 147 Out-of-frame Inter-chr q33.1 q12 Seq+ 21812 ChimerSeq STARFusion TCGA_RNA-Seq NARS2-NDUFC2 NARS2 chr11 78270585 - NDUFC2 chr11 77784187 - Exonic hg19 BRCA TCGA-B6-A0I9-01A 16 55 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 21813 ChimerSeq STARFusion TCGA_RNA-Seq FSD1L-ADAMTS13 FSD1L chr9 108210516 + ADAMTS13 chr9 136313720 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 7 35 Out-of-frame Intra-chr q31.2 Seq+ 21814 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KA5-C14orf132 RPS6KA5 chr14 91526676 - C14orf132 chr14 96552848 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 9 11 Out-of-frame Intra-chr q32.11 q32.2 Seq+ 21815 ChimerSeq STARFusion TCGA_RNA-Seq C2orf48-UQCC C2orf48 chr2 10282081 + UQCC chr20 33935075 - Exonic hg19 BRCA TCGA-B6-A0I9-01A 5 16 Out-of-frame Inter-chr p25.1 21816 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-NBPF4 FCHSD2 chr11 72851076 - NBPF4 chr1 108777033 - Exonic hg19 BRCA TCGA-B6-A0I9-01A 8 3 In-Frame Inter-chr q13.4 p13.3 Seq+ 21817 ChimerSeq STARFusion TCGA_RNA-Seq PMEPA1-FAM83C PMEPA1 chr20 56284530 - FAM83C chr20 33876761 - Exonic hg19 BRCA TCGA-B6-A0I9-01A 5 15 Out-of-frame Intra-chr q13.31 q11.22 Seq+ 21818 ChimerSeq STARFusion TCGA_RNA-Seq BPTF-PITPNC1 BPTF chr17 65850878 + PITPNC1 chr17 65665624 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 5 12 Out-of-frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 21819 ChimerSeq STARFusion TCGA_RNA-Seq NIPSNAP3A-TMEFF1 NIPSNAP3A chr9 107510133 + TMEFF1 chr9 103310026 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 3 15 Out-of-frame Intra-chr q31.1 q31.1 Tumor suppressor gene Seq+ 21820 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-ISPD PPFIA1 chr11 70201917 + ISPD chr7 16341091 - Exonic hg19 BRCA TCGA-B6-A0I9-01A 4 11 Out-of-frame Inter-chr q13.3 p21.2 Seq+ 21821 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-NBPF6 FCHSD2 chr11 72851076 - NBPF6 chr1 109002555 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 5 4 In-Frame Inter-chr q13.4 p13.3 Seq+ 21822 ChimerSeq STARFusion TCGA_RNA-Seq RORA-ARNT2 RORA chr15 61521252 - ARNT2 chr15 80885941 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 4 8 Out-of-frame Intra-chr q22.2 Transcription factor q25.1 Transcription factor Seq+ 21823 ChimerSeq STARFusion TCGA_RNA-Seq TRIM25-MSI2 TRIM25 chr17 54972704 - MSI2 chr17 55674229 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 2 15 In-Frame Intra-chr q22 q22 Seq+ 21824 ChimerSeq STARFusion TCGA_RNA-Seq TRIM25-MSI2 TRIM25 chr17 54972704 - MSI2 chr17 55607037 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 2 15 Out-of-frame Intra-chr q22 q22 Seq+ 21825 ChimerSeq STARFusion TCGA_RNA-Seq MED1-ARHGAP23 MED1 chr17 37604051 - ARHGAP23 chr17 36614346 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 2 12 In-Frame Intra-chr q12 Tumor suppressor gene q12 Seq+ 21826 ChimerSeq STARFusion TCGA_RNA-Seq ISPD-LOC100507412 ISPD chr7 16298015 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 2 5 CDS-5'UTR Inter-chr p21.2 21827 ChimerSeq STARFusion TCGA_RNA-Seq NR2C2-ACSS2 NR2C2 chr3 14989413 + ACSS2 chr20 33500899 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 2 4 5'UTR-CDS Inter-chr p25.1 Tumor suppressor gene Transcription factor q11.22 21828 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1211L-KANSL3 KIAA1211L chr2 99438320 - KANSL3 chr2 97297219 - Exonic hg19 BRCA TCGA-B6-A0I9-01A 2 2 Out-of-frame Intra-chr q11.2 q11.2 21829 ChimerSeq STARFusion TCGA_RNA-Seq TMEM189-ITFG1 TMEM189 chr20 48760039 - ITFG1 chr16 47347734 - Exonic hg19 BRCA TCGA-B6-A0I9-01A 2 1 In-Frame Inter-chr q13.13 q12.1 21830 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-MIA2 ETV6 chr12 11803094 + MIA2 chr14 39716115 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 2 0 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q21.1 Tumor suppressor gene 21831 ChimerSeq STARFusion TCGA_RNA-Seq CLSTN2-PCOLCE2 CLSTN2 chr3 140285052 + PCOLCE2 chr3 142539887 - Exonic hg19 BRCA TCGA-A2-A0CL-01A 37 183 Out-of-frame Intra-chr q23 q23 Seq+ 21832 ChimerSeq STARFusion TCGA_RNA-Seq CLSTN2-PCOLCE2 CLSTN2 chr3 140285502 + PCOLCE2 chr3 142539887 - Exonic hg19 BRCA TCGA-A2-A0CL-01A 12 183 3'UTR-CDS Intra-chr q23 q23 Seq+ 21833 ChimerSeq STARFusion TCGA_RNA-Seq PLS1-CLDN18 PLS1 chr3 142315351 + CLDN18 chr3 137742500 + Exonic hg19 BRCA TCGA-A2-A0CL-01A 5 108 5'UTR-CDS Intra-chr q23 q22.3 Seq+ 21834 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB2-C10orf54 RPS6KB2 chr11 67196094 + C10orf54 chr10 73515223 - Exonic hg19 BRCA TCGA-A2-A0CL-01A 12 30 Out-of-frame Inter-chr q13.2 Seq+ 21835 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-SGSM3 TNRC6B chr22 40521866 + SGSM3 chr22 40796700 + Exonic hg19 BRCA TCGA-A2-A0CL-01A 11 20 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 21836 ChimerSeq STARFusion TCGA_RNA-Seq CS-LOC100507412 CS chr12 56692393 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-A2-A0CL-01A 3 38 CDS-5'UTR Inter-chr q13.3 21837 ChimerSeq STARFusion TCGA_RNA-Seq CS-LOC100507412 CS chr12 56693944 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-A2-A0CL-01A 2 38 CDS-5'UTR Inter-chr q13.3 21838 ChimerSeq STARFusion TCGA_RNA-Seq ANK3-CDK1 ANK3 chr10 61894029 - CDK1 chr10 62539899 + Exonic hg19 BRCA TCGA-A2-A0CL-01A 6 14 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 21839 ChimerSeq STARFusion TCGA_RNA-Seq GK5-MBNL1 GK5 chr3 141932368 - MBNL1 chr3 152132730 + Exonic hg19 BRCA TCGA-A2-A0CL-01A 7 7 Out-of-frame Intra-chr q23 q25.1 Seq+ 21840 ChimerSeq STARFusion TCGA_RNA-Seq GAB2-THRSP GAB2 chr11 77991647 - THRSP chr11 77778705 + Exonic hg19 BRCA TCGA-A2-A0CL-01A 4 14 CDS-3'UTR Intra-chr q14.1 q14.1 Seq+ 21841 ChimerSeq STARFusion TCGA_RNA-Seq TACC2-MICU1 TACC2 chr10 123749003 + MICU1 chr10 74135630 - Exonic hg19 BRCA TCGA-A2-A0CL-01A 5 10 5'UTR-CDS Intra-chr q26.13 q22.1 Seq+ 21842 ChimerSeq STARFusion TCGA_RNA-Seq TMEM106B-ABCB5 TMEM106B chr7 12258147 + ABCB5 chr7 20778606 + Exonic hg19 BRCA TCGA-A2-A0CL-01A 3 2 In-Frame Intra-chr p21.3 p21.1 21843 ChimerSeq STARFusion TCGA_RNA-Seq ATR-DBR1 ATR chr3 142297488 - DBR1 chr3 137892468 - Exonic hg19 BRCA TCGA-A2-A0CL-01A 2 5 3'UTR-CDS Intra-chr q23 Atypical:PIKK Oncogene Tumor suppressor gene q22.3 Seq+ 21844 ChimerSeq STARFusion TCGA_RNA-Seq CRLS1-CES5A CRLS1 chr20 6015201 + CES5A chr16 55903656 - Exonic hg19 BRCA TCGA-A2-A0CL-01A 2 4 Out-of-frame Inter-chr p12.3 q12.2 Seq+ 21845 ChimerSeq STARFusion TCGA_RNA-Seq SMARCB1-CABIN1 SMARCB1 chr22 24135875 + CABIN1 chr22 24560368 + Exonic hg19 BRCA TCGA-A2-A0CL-01A 2 4 Out-of-frame Intra-chr q11.23 Oncogene Tumor suppressor gene 21846 ChimerSeq STARFusion TCGA_RNA-Seq PTPN9-SIN3A PTPN9 chr15 75809600 - SIN3A chr15 75676778 - Exonic hg19 BRCA TCGA-A2-A0CL-01A 2 1 In-Frame Intra-chr q24.2 q24.2 21847 ChimerSeq STARFusion TCGA_RNA-Seq HEATR1-LGALS8 HEATR1 chr1 236754147 - LGALS8 chr1 236706061 + Exonic hg19 BRCA TCGA-A2-A0CL-01A 2 0 In-Frame Intra-chr q43 q43 21848 ChimerSeq STARFusion TCGA_RNA-Seq ZEB2-GTDC1 ZEB2 chr2 145274845 - GTDC1 chr2 144728329 - Exonic hg19 BRCA TCGA-A2-A0CL-01A 2 0 Out-of-frame Intra-chr q22.3 Transcription factor q22.3 21849 ChimerSeq STARFusion TCGA_RNA-Seq LRP11-ULBP2 LRP11 chr6 150147400 - ULBP2 chr6 150269859 + Exonic hg19 BRCA TCGA-A8-A07F-01A 2 16 CDS-3'UTR Intra-chr q25.1 q25.1 Seq+ 21850 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1467-EMP1 KIAA1467 chr12 13229077 + EMP1 chr12 13364403 + Exonic hg19 BRCA TCGA-A8-A07F-01A 3 3 CDS-5'UTR Intra-chr p13.1 Tumor suppressor gene 21851 ChimerSeq STARFusion TCGA_RNA-Seq PICALM-SYTL2 PICALM chr11 85685751 - SYTL2 chr11 85469157 - Exonic hg19 BRCA TCGA-A8-A07F-01A 2 1 CDS-5'UTR Intra-chr q14.2 q14.1 21852 ChimerSeq STARFusion TCGA_RNA-Seq YIPF4-HNRPLL YIPF4 chr2 32526564 + HNRPLL chr2 38818790 - Exonic hg19 BRCA TCGA-A8-A07F-01A 2 0 In-Frame Intra-chr p22.3 21853 ChimerSeq STARFusion TCGA_RNA-Seq MED1-ODF3L2 MED1 chr17 37604051 - ODF3L2 chr19 464364 - Exonic hg19 BRCA TCGA-LL-A5YN-01A 12 87 Out-of-frame Inter-chr q12 Tumor suppressor gene p13.3 Seq+ 21854 ChimerSeq STARFusion TCGA_RNA-Seq HERC1-KIAA0101 HERC1 chr15 63970044 - KIAA0101 chr15 64658274 - Exonic hg19 BRCA TCGA-LL-A5YN-01A 2 28 In-Frame Intra-chr q22.31 Seq+ 21855 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-RPS6KB2 KDM2A chr11 66888829 + RPS6KB2 chr11 67200811 + Exonic hg19 BRCA TCGA-AR-A1AY-01A 55 223 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 21856 ChimerSeq STARFusion TCGA_RNA-Seq MBD2-DOCK2 MBD2 chr18 51715244 - DOCK2 chr5 169502951 + Exonic hg19 BRCA TCGA-AR-A1AY-01A 46 191 In-Frame Inter-chr q21.2 Transcription factor q35.1 Seq+ 21857 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-RPS6KB2 KDM2A chr11 66917286 + RPS6KB2 chr11 67200811 + Exonic hg19 BRCA TCGA-AR-A1AY-01A 14 223 5'UTR-CDS Intra-chr q13.2 Transcription factor q13.2 Seq+ 21858 ChimerSeq STARFusion TCGA_RNA-Seq DDX39B-PRPH2 DDX39B chr6_dbb_hap3 2792120 - PRPH2 chr6 42672349 - Exonic hg19 BRCA TCGA-AR-A1AY-01A 10 14 3'UTR-CDS Inter-chr p21.1 Seq+ 21859 ChimerSeq STARFusion TCGA_RNA-Seq RECQL4-CPSF1 RECQL4 chr8 145739406 - CPSF1 chr8 145623429 - Exonic hg19 BRCA TCGA-AR-A1AY-01A 5 30 Out-of-frame Intra-chr q24.3 Oncogene q24.3 Seq+ 21860 ChimerSeq STARFusion TCGA_RNA-Seq OR7E156P-CTNNB1 OR7E156P chr13 64311652 + CTNNB1 chr3 41265510 + Exonic hg19 BRCA TCGA-AR-A1AY-01A 3 0 Out-of-frame Inter-chr q21.31 p22.1 Oncogene 21861 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-SENP6 ACTB chr7 5567023 - SENP6 chr6 76311984 + Exonic hg19 BRCA TCGA-AR-A1AL-01A 3 0 Out-of-frame Inter-chr p22.1 q14.1 21862 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86351941 + Exonic hg19 BRCA TCGA-AR-A1AL-01A 2 0 Out-of-frame Intra-chr q21.2 q21.2 21863 ChimerSeq STARFusion TCGA_RNA-Seq CUL4A-DDX17 CUL4A chr13 113889459 + DDX17 chr22 38897285 - Exonic hg19 BRCA TCGA-AR-A1AL-01A 2 0 In-Frame Inter-chr q34 q13.1 21864 ChimerSeq STARFusion TCGA_RNA-Seq ALG2-RPL30 ALG2 chr9 101984074 - RPL30 chr8 99057626 - Exonic hg19 BRCA TCGA-A2-A1G0-01A 8 1 Out-of-frame Inter-chr q22.33 q22.2 21865 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57915656 + Exonic hg19 BRCA TCGA-JL-A3YW-01A 183 516 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 21866 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0195-ICT1 KIAA0195 chr17 73452832 + ICT1 chr17 73013173 + Exonic hg19 BRCA TCGA-JL-A3YW-01A 21 6 5'UTR-CDS Intra-chr Seq+ 21867 ChimerSeq STARFusion TCGA_RNA-Seq MSN-NLRC4 MSN chrX 64887720 + NLRC4 chr2 32460637 - Exonic hg19 BRCA TCGA-JL-A3YW-01A 3 57 Out-of-frame Inter-chr q12 p22.3 Seq+ 21868 ChimerSeq STARFusion TCGA_RNA-Seq SCMH1-EIF2B3 SCMH1 chr1 41578955 - EIF2B3 chr1 45316675 - Exonic hg19 BRCA TCGA-JL-A3YW-01A 10 17 In-Frame Intra-chr p34.2 Transcription factor p34.1 Seq+ 21869 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF5-STEAP1B RAPGEF5 chr7 22232985 - STEAP1B chr7 22459455 - Exonic hg19 BRCA TCGA-JL-A3YW-01A 2 36 Out-of-frame Intra-chr p15.3 p15.3 Seq+ 21870 ChimerSeq STARFusion TCGA_RNA-Seq FZR1-NFIC FZR1 chr19 3526384 + NFIC chr19 3462750 + Exonic hg19 BRCA TCGA-JL-A3YW-01A 4 27 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Transcription factor Seq+ 21871 ChimerSeq STARFusion TCGA_RNA-Seq NFIA-FGGY NFIA chr1 61849037 + FGGY chr1 60125891 + Exonic hg19 BRCA TCGA-JL-A3YW-01A 5 20 Out-of-frame Intra-chr p31.3 Transcription factor p32.1 Seq+ 21872 ChimerSeq STARFusion TCGA_RNA-Seq TC2N-ATXN3 TC2N chr14 92246920 - ATXN3 chr14 92563182 - Exonic hg19 BRCA TCGA-JL-A3YW-01A 4 13 3'UTR-3'UTR Intra-chr q32.12 Seq+ 21873 ChimerSeq STARFusion TCGA_RNA-Seq SASH1-LPIN3 SASH1 chr6 148711398 + LPIN3 chr20 39974436 + Exonic hg19 BRCA TCGA-JL-A3YW-01A 4 7 CDS-5'UTR Inter-chr q24.3 Tumor suppressor gene q12 Seq+ 21874 ChimerSeq STARFusion TCGA_RNA-Seq SHB-SLC28A3 SHB chr9 38067926 - SLC28A3 chr9 86928369 - Exonic hg19 BRCA TCGA-JL-A3YW-01A 3 11 In-Frame Intra-chr p13.1 q21.33 Seq+ 21875 ChimerSeq STARFusion TCGA_RNA-Seq SULT1B1-CSN2 SULT1B1 chr4 70596219 - CSN2 chr4 70825797 - Exonic hg19 BRCA TCGA-JL-A3YW-01A 2 5 Out-of-frame Intra-chr q13.3 Tumor suppressor gene Seq+ 21876 ChimerSeq STARFusion TCGA_RNA-Seq SULT1B1-CSN2 SULT1B1 chr4 70596219 - CSN2 chr4 70824787 - Exonic hg19 BRCA TCGA-JL-A3YW-01A 2 5 Out-of-frame Intra-chr q13.3 Tumor suppressor gene Seq+ 21877 ChimerSeq STARFusion TCGA_RNA-Seq TMEM104-DNAI2 TMEM104 chr17 72791771 + DNAI2 chr17 72310260 + Exonic hg19 BRCA TCGA-EW-A1PA-01A 55 65 In-Frame Intra-chr q25.1 q25.1 Seq+ 21878 ChimerSeq STARFusion TCGA_RNA-Seq MKNK2-FAM151A MKNK2 chr19 2046185 - FAM151A chr1 55076228 - Exonic hg19 BRCA TCGA-EW-A1PA-01A 4 10 Out-of-frame Inter-chr p13.3 p32.3 Seq+ 21879 ChimerSeq STARFusion TCGA_RNA-Seq TSTD3-TSHZ2 TSTD3 chr6 99969023 + TSHZ2 chr20 52103683 + Exonic hg19 BRCA TCGA-EW-A1PA-01A 4 9 Out-of-frame Inter-chr q16.2 q13.2 Transcription factor Seq+ 21880 ChimerSeq STARFusion TCGA_RNA-Seq ZNF813-TOP1 ZNF813 chr19 53971043 + TOP1 chr20 39741422 + Exonic hg19 BRCA TCGA-EW-A1PA-01A 4 6 5'UTR-CDS Inter-chr q13.42 Transcription factor q12 Oncogene Seq+ 21881 ChimerSeq STARFusion TCGA_RNA-Seq DOK5-TIMP3 DOK5 chr20 53092551 + TIMP3 chr22 33245439 + Exonic hg19 BRCA TCGA-EW-A1PA-01A 2 0 Out-of-frame Inter-chr q13.2 q12.3 Oncogene Tumor suppressor gene 21882 ChimerSeq STARFusion TCGA_RNA-Seq RNF40-PLK1 RNF40 chr16 30783511 + PLK1 chr16 23698790 + Exonic hg19 BRCA TCGA-AC-A6IV-01A 12 17 Out-of-frame Intra-chr p11.2 p12.2 Other:PLK Tumor suppressor gene Seq+ 21883 ChimerSeq STARFusion TCGA_RNA-Seq PREB-FLNA PREB chr2 27356400 - FLNA chrX 153583440 - Exonic hg19 BRCA TCGA-AR-A1AK-01A 2 1 In-Frame Inter-chr p23.3 Transcription factor q28 Tumor suppressor gene 21884 ChimerSeq STARFusion TCGA_RNA-Seq CCDC14-GNAS CCDC14 chr3 123679991 - GNAS chr20 57470667 + Exonic hg19 BRCA TCGA-AR-A1AK-01A 2 0 Out-of-frame Inter-chr q21.1 q13.32 Oncogene 21885 ChimerSeq STARFusion TCGA_RNA-Seq USP32-CRYBA4 USP32 chr17 58372044 - CRYBA4 chr22 27018549 + Exonic hg19 BRCA TCGA-D8-A1XL-01A 11 37 CDS-5'UTR Inter-chr q23.2 q12.1 Seq+ 21886 ChimerSeq STARFusion TCGA_RNA-Seq ZNF77-LPCAT2 ZNF77 chr19 2944836 - LPCAT2 chr16 55559420 + Exonic hg19 BRCA TCGA-D8-A1XL-01A 2 13 In-Frame Inter-chr p13.3 Transcription factor q12.2 Seq+ 21887 ChimerSeq STARFusion TCGA_RNA-Seq LPCAT2-CACTIN LPCAT2 chr16 55571544 + CACTIN chr19 3620270 - Exonic hg19 BRCA TCGA-D8-A1XL-01A 2 7 Out-of-frame Inter-chr q12.2 p13.3 Seq+ 21888 ChimerSeq STARFusion TCGA_RNA-Seq ACAP2-CALM2 ACAP2 chr3 195063200 - CALM2 chr2 47397903 - Exonic hg19 BRCA TCGA-D8-A1XL-01A 2 0 In-Frame Inter-chr q29 p21 21889 ChimerSeq STARFusion TCGA_RNA-Seq SMG1-MYH11 SMG1 chr16 18844265 - MYH11 chr16 15797983 - Exonic hg19 BRCA TCGA-A2-A04Q-01A 45 123 Out-of-frame Intra-chr p12.3 Atypical:PIKK Oncogene Seq+ 21890 ChimerSeq STARFusion TCGA_RNA-Seq GATA3-LOC100188947 GATA3 chr10 8100804 + LOC100188947 chr10 93110636 - Exonic hg19 BRCA TCGA-A2-A04Q-01A 2 9 CDS-3'UTR Intra-chr p14 Oncogene Transcription factor 21891 ChimerSeq STARFusion TCGA_RNA-Seq MTAP-CDKN2A MTAP chr9 21818201 + CDKN2A chr9 21971207 - Exonic hg19 BRCA TCGA-A2-A04Q-01A 2 5 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.3 Oncogene Tumor suppressor gene Seq+ 21892 ChimerSeq STARFusion TCGA_RNA-Seq CDK19-SEMA3A CDK19 chr6 111067329 - SEMA3A chr7 83689874 - Exonic hg19 BRCA TCGA-A2-A04Q-01A 2 1 In-Frame Inter-chr q21 q21.11 21893 ChimerSeq STARFusion TCGA_RNA-Seq EDF1-TPRN EDF1 chr9 139757740 - TPRN chr9 140087143 - Exonic hg19 BRCA TCGA-A2-A04Q-01A 2 1 In-Frame Intra-chr q34.3 q34.3 21894 ChimerSeq STARFusion TCGA_RNA-Seq DIDO1-CTCF DIDO1 chr20 61569148 - CTCF chr16 67605051 + Exonic hg19 BRCA TCGA-A2-A04Q-01A 2 0 5'UTR-5'UTR Inter-chr q13.33 Tumor suppressor gene q22.1 Tumor suppressor gene Transcription factor 21895 ChimerSeq STARFusion TCGA_RNA-Seq NCS1-AP3D1 NCS1 chr9 132963261 + AP3D1 chr19 2102267 - Exonic hg19 BRCA TCGA-A2-A04Q-01A 2 0 Out-of-frame Inter-chr q34.11 p13.3 21896 ChimerSeq STARFusion TCGA_RNA-Seq EFNA3-PIK3C2G EFNA3 chr1 155057880 + PIK3C2G chr12 18499575 + Exonic hg19 BRCA TCGA-EW-A1PC-01B 21 21 In-Frame Inter-chr q21.3 p12.3 Seq+ 21897 ChimerSeq STARFusion TCGA_RNA-Seq MITF-MTERFD1 MITF chr3 69788852 + MTERFD1 chr8 97269342 - Exonic hg19 BRCA TCGA-EW-A1PC-01B 3 25 Out-of-frame Inter-chr p13 Oncogene Transcription factor Seq+ 21898 ChimerSeq STARFusion TCGA_RNA-Seq DPY19L4-ESRP1 DPY19L4 chr8 95752018 + ESRP1 chr8 95718153 + Exonic hg19 BRCA TCGA-EW-A1PC-01B 2 1 In-Frame Intra-chr q22.1 q22.1 Tumor suppressor gene 21899 ChimerSeq STARFusion TCGA_RNA-Seq EXOC2-SH3RF3 EXOC2 chr6 693019 - SH3RF3 chr2 109964130 + Exonic hg19 BRCA TCGA-C8-A12U-01A 14 19 5'UTR-CDS Inter-chr p25.3 q13 Seq+ 21900 ChimerSeq STARFusion TCGA_RNA-Seq HSD17B7-NPHP1 HSD17B7 chr1 162762652 + NPHP1 chr2 110927575 - Exonic hg19 BRCA TCGA-C8-A12U-01A 3 44 In-Frame Inter-chr q23.3 q13 Seq+ 21901 ChimerSeq STARFusion TCGA_RNA-Seq TMEM136-POU2F3 TMEM136 chr11 120198349 + POU2F3 chr11 120139919 + Exonic hg19 BRCA TCGA-C8-A12U-01A 7 18 In-Frame Intra-chr q23.3 q23.3 Tumor suppressor gene Transcription factor Seq+ 21902 ChimerSeq STARFusion TCGA_RNA-Seq GRHL2-TRAPPC9 GRHL2 chr8 102611379 + TRAPPC9 chr8 140922544 - Exonic hg19 BRCA TCGA-C8-A12U-01A 5 16 Out-of-frame Intra-chr q22.3 Transcription factor q24.3 Seq+ 21903 ChimerSeq STARFusion TCGA_RNA-Seq METAP2-LOC100507412 METAP2 chr12 95877056 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-C8-A12U-01A 5 16 CDS-5'UTR Inter-chr q22 21904 ChimerSeq STARFusion TCGA_RNA-Seq RANBP2-BMP5 RANBP2 chr2 109371715 + BMP5 chr6 55659225 - Exonic hg19 BRCA TCGA-C8-A12U-01A 4 17 Out-of-frame Inter-chr q13 p12.1 Seq+ 21905 ChimerSeq STARFusion TCGA_RNA-Seq CCDC138-GFRAL CCDC138 chr2 109432561 + GFRAL chr6 55263978 + Exonic hg19 BRCA TCGA-C8-A12U-01A 2 2 Out-of-frame Inter-chr q13 p12.1 Seq+ 21906 ChimerSeq STARFusion TCGA_RNA-Seq CANT1-PLEKHA7 CANT1 chr17 76993074 - PLEKHA7 chr11 16892729 - Exonic hg19 BRCA TCGA-C8-A12U-01A 2 1 Out-of-frame Inter-chr q25.3 p15.1 21907 ChimerSeq STARFusion TCGA_RNA-Seq ZNF107-MRPS6 ZNF107 chr7 64139714 + MRPS6 chr21 35497641 + Exonic hg19 BRCA TCGA-C8-A12U-01A 2 0 5'UTR-CDS Inter-chr q11.21 Transcription factor q22.11 21908 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0907-PHC1 KIAA0907 chr1 155903424 - PHC1 chr12 9070226 + Exonic hg19 BRCA TCGA-A7-A6VX-01A 3 23 CDS-5'UTR Inter-chr q22 p13.31 Seq+ 21909 ChimerSeq STARFusion TCGA_RNA-Seq SPIRE1-CUBN SPIRE1 chr18 12449244 - CUBN chr10 16878381 - Exonic hg19 BRCA TCGA-A7-A6VX-01A 3 6 3'UTR-5'UTR Inter-chr p11.21 p13 Seq+ 21910 ChimerSeq STARFusion TCGA_RNA-Seq CPB1-SLC38A1 CPB1 chr3 148575311 + SLC38A1 chr12 46579776 - Exonic hg19 BRCA TCGA-B6-A0X4-01A 3 1 Out-of-frame Inter-chr q24 q13.11 21911 ChimerSeq STARFusion TCGA_RNA-Seq MYL12B-ACAP1 MYL12B chr18 3262235 + ACAP1 chr17 7245267 + Exonic hg19 BRCA TCGA-E2-A1L9-01A 14 34 5'UTR-CDS Inter-chr p11.31 p13.1 Seq+ 21912 ChimerSeq STARFusion TCGA_RNA-Seq C1orf198-AGT C1orf198 chr1 230979100 - AGT chr1 230846599 - Exonic hg19 BRCA TCGA-E2-A1L9-01A 2 1 CDS-5'UTR Intra-chr q42.2 q42.2 Seq+ 21913 ChimerSeq STARFusion TCGA_RNA-Seq MEGF8-PRR19 MEGF8 chr19 42855913 + PRR19 chr19 42814423 + Exonic hg19 BRCA TCGA-BH-A0H0-01A 7 80 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 21914 ChimerSeq STARFusion TCGA_RNA-Seq MEGF8-PRR19 MEGF8 chr19 42856500 + PRR19 chr19 42813951 + Exonic hg19 BRCA TCGA-BH-A0H0-01A 4 79 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 21915 ChimerSeq STARFusion TCGA_RNA-Seq MEGF8-PRR19 MEGF8 chr19 42855913 + PRR19 chr19 42814214 + Exonic hg19 BRCA TCGA-BH-A0H0-01A 4 79 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 21916 ChimerSeq STARFusion TCGA_RNA-Seq PRR19-PPP1R37 PRR19 chr19 42806655 + PPP1R37 chr19 45641772 + Exonic hg19 BRCA TCGA-BH-A0H0-01A 16 21 5'UTR-CDS Intra-chr q13.2 q13.32 Seq+ 21917 ChimerSeq STARFusion TCGA_RNA-Seq TRIM33-CSDE1 TRIM33 chr1 114970370 - CSDE1 chr1 115280693 - Exonic hg19 BRCA TCGA-BH-A0H0-01A 8 31 Out-of-frame Intra-chr p13.2 Oncogene p13.2 Seq+ 21918 ChimerSeq STARFusion TCGA_RNA-Seq THEM4-DCST2 THEM4 chr1 151881836 - DCST2 chr1 154999191 - Exonic hg19 BRCA TCGA-C8-A3M8-01A 11 35 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 21919 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-GMDS VPS13B chr8 100844880 + GMDS chr6 1742820 - Exonic hg19 BRCA TCGA-C8-A3M8-01A 10 15 Out-of-frame Inter-chr q22.2 p25.3 Seq+ 21920 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-GMDS VPS13B chr8 100844880 + GMDS chr6 1726746 - Exonic hg19 BRCA TCGA-C8-A3M8-01A 2 15 In-Frame Inter-chr q22.2 p25.3 Seq+ 21921 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-GMDS VPS13B chr8 100836206 + GMDS chr6 1742820 - Exonic hg19 BRCA TCGA-C8-A3M8-01A 2 15 In-Frame Inter-chr q22.2 p25.3 Seq+ 21922 ChimerSeq STARFusion TCGA_RNA-Seq STAG3L3-FAM196B STAG3L3 chr7 72469199 - FAM196B chr5 169311820 - Exonic hg19 BRCA TCGA-C8-A3M8-01A 2 12 3'UTR-5'UTR Inter-chr q11.23 q35.1 Seq+ 21923 ChimerSeq STARFusion TCGA_RNA-Seq STAG3L2-FAM196B STAG3L2 chr7 74299455 - FAM196B chr5 169311820 - Exonic hg19 BRCA TCGA-C8-A3M8-01A 2 5 3'UTR-5'UTR Inter-chr q11.23 q35.1 21924 ChimerSeq STARFusion TCGA_RNA-Seq ZNF492-NLRP5 ZNF492 chr19 22817276 + NLRP5 chr19 56549391 + Exonic hg19 BRCA TCGA-BH-A18K-01A 6 67 5'UTR-CDS Intra-chr p12 Transcription factor q13.43 Seq+ 21925 ChimerSeq STARFusion TCGA_RNA-Seq ZNF274-MZF1 ZNF274 chr19 58721439 + MZF1 chr19 59074871 - Exonic hg19 BRCA TCGA-BH-A18K-01A 9 14 Out-of-frame Intra-chr q13.43 Transcription factor q13.43 Transcription factor 21926 ChimerSeq STARFusion TCGA_RNA-Seq ATRNL1-ATAD1 ATRNL1 chr10 117278834 + ATAD1 chr10 89574369 - Exonic hg19 BRCA TCGA-BH-A18K-01A 3 2 CDS-5'UTR Intra-chr q25.3 Seq+ 21927 ChimerSeq STARFusion TCGA_RNA-Seq AMFR-ITGAM AMFR chr16 56419831 - ITGAM chr16 31332562 + Exonic hg19 BRCA TCGA-D8-A27W-01A 91 132 5'UTR-CDS Intra-chr q13 p11.2 Seq+ 21928 ChimerSeq STARFusion TCGA_RNA-Seq COLGALT1-FMNL1 COLGALT1 chr19 17671253 + FMNL1 chr17 43311494 + Exonic hg19 BRCA TCGA-D8-A27W-01A 42 82 Out-of-frame Inter-chr p13.11 q21.31 Seq+ 21929 ChimerSeq STARFusion TCGA_RNA-Seq FMNL1-APOH FMNL1 chr17 43311567 + APOH chr17 64252645 - Exonic hg19 BRCA TCGA-D8-A27W-01A 35 54 CDS-5'UTR Intra-chr q21.31 q24.2 21930 ChimerSeq STARFusion TCGA_RNA-Seq WRNIP1-IGH@ WRNIP1 chr6 2766577 + IGH@ chr14 106330464 - Exonic hg19 BRCA TCGA-D8-A27W-01A 19 1 Out-of-frame Inter-chr p25.2 32.33 21931 ChimerSeq STARFusion TCGA_RNA-Seq WRNIP1-IGHG3 WRNIP1 chr6 2766577 + IGHG3 chr14 106330464 - Exonic hg19 BRCA TCGA-D8-A27W-01A 19 1 Out-of-frame Inter-chr p25.2 21932 ChimerSeq STARFusion TCGA_RNA-Seq FMNL1-APOH FMNL1 chr17 43313611 + APOH chr17 64252645 - Exonic hg19 BRCA TCGA-D8-A27W-01A 5 54 CDS-5'UTR Intra-chr q21.31 q24.2 21933 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-PCDHA10 MATR3 chr5 138629494 + PCDHA10 chr5 140358534 + Exonic hg19 BRCA TCGA-D8-A27W-01A 9 28 5'UTR-CDS Intra-chr q31.2 q31.3 21934 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-PCDHA11 MATR3 chr5 138629494 + PCDHA11 chr5 140358534 + Exonic hg19 BRCA TCGA-D8-A27W-01A 9 28 5'UTR-CDS Intra-chr q31.2 q31.3 21935 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-PCDHA12 MATR3 chr5 138629494 + PCDHA12 chr5 140358534 + Exonic hg19 BRCA TCGA-D8-A27W-01A 9 28 5'UTR-CDS Intra-chr q31.2 q31.3 21936 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-PCDHA13 MATR3 chr5 138629494 + PCDHA13 chr5 140358534 + Exonic hg19 BRCA TCGA-D8-A27W-01A 9 28 5'UTR-CDS Intra-chr q31.2 q31.3 Seq+ 21937 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-PCDHA6 MATR3 chr5 138629494 + PCDHA6 chr5 140358534 + Exonic hg19 BRCA TCGA-D8-A27W-01A 9 28 5'UTR-CDS Intra-chr q31.2 q31.3 21938 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-PCDHAC1 MATR3 chr5 138629494 + PCDHAC1 chr5 140358534 + Exonic hg19 BRCA TCGA-D8-A27W-01A 9 28 5'UTR-CDS Intra-chr q31.2 q31.3 Seq+ 21939 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-PCDHAC2 MATR3 chr5 138629494 + PCDHAC2 chr5 140358534 + Exonic hg19 BRCA TCGA-D8-A27W-01A 9 28 5'UTR-CDS Intra-chr q31.2 q31.3 Seq+ 21940 ChimerSeq STARFusion TCGA_RNA-Seq WRNIP1-IGHG3 WRNIP1 chr6 2766577 + IGHG3 chr14 106330063 - Exonic hg19 BRCA TCGA-D8-A27W-01A 12 1 Out-of-frame Inter-chr p25.2 21941 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-PCDHA10 MATR3 chr5 138629717 + PCDHA10 chr5 140358534 + Exonic hg19 BRCA TCGA-D8-A27W-01A 3 28 In-Frame Intra-chr q31.2 q31.3 21942 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-PCDHA11 MATR3 chr5 138629717 + PCDHA11 chr5 140358534 + Exonic hg19 BRCA TCGA-D8-A27W-01A 3 28 In-Frame Intra-chr q31.2 q31.3 21943 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-PCDHA12 MATR3 chr5 138629717 + PCDHA12 chr5 140358534 + Exonic hg19 BRCA TCGA-D8-A27W-01A 3 28 In-Frame Intra-chr q31.2 q31.3 21944 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-PCDHA13 MATR3 chr5 138629717 + PCDHA13 chr5 140358534 + Exonic hg19 BRCA TCGA-D8-A27W-01A 3 28 In-Frame Intra-chr q31.2 q31.3 Seq+ 21945 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-PCDHA6 MATR3 chr5 138629717 + PCDHA6 chr5 140358534 + Exonic hg19 BRCA TCGA-D8-A27W-01A 3 28 In-Frame Intra-chr q31.2 q31.3 21946 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-PCDHAC1 MATR3 chr5 138629717 + PCDHAC1 chr5 140358534 + Exonic hg19 BRCA TCGA-D8-A27W-01A 3 28 In-Frame Intra-chr q31.2 q31.3 Seq+ 21947 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-PCDHAC2 MATR3 chr5 138629717 + PCDHAC2 chr5 140358534 + Exonic hg19 BRCA TCGA-D8-A27W-01A 3 28 In-Frame Intra-chr q31.2 q31.3 Seq+ 21948 ChimerSeq STARFusion TCGA_RNA-Seq PAWR-CLEC2A PAWR chr12 80083509 - CLEC2A chr12 10069402 - Exonic hg19 BRCA TCGA-D8-A27W-01A 4 7 In-Frame Intra-chr q21.2 Tumor suppressor gene p13.31 Seq+ 21949 ChimerSeq STARFusion TCGA_RNA-Seq FAM86C2P-RNF121 FAM86C2P chr11 67566845 - RNF121 chr11 71668273 + Exonic hg19 BRCA TCGA-D8-A27W-01A 3 10 3'UTR-CDS Intra-chr q13.2 q13.4 21950 ChimerSeq STARFusion TCGA_RNA-Seq MLLT4-KCNAB1 MLLT4 chr6 168227917 + KCNAB1 chr3 156232153 + Exonic hg19 BRCA TCGA-HN-A2NL-01A 18 68 Out-of-frame Inter-chr q25.31 Seq+ 21951 ChimerSeq STARFusion TCGA_RNA-Seq HN1-GGA3 HN1 chr17 73142761 - GGA3 chr17 73242877 - Exonic hg19 BRCA TCGA-HN-A2NL-01A 8 27 In-Frame Intra-chr q25.1 Seq+ 21952 ChimerSeq STARFusion TCGA_RNA-Seq HN1-GGA3 HN1 chr17 73142761 - GGA3 chr17 73245089 - Exonic hg19 BRCA TCGA-HN-A2NL-01A 3 27 CDS-3'UTR Intra-chr q25.1 Seq+ 21953 ChimerSeq STARFusion TCGA_RNA-Seq PDE4D-ERCC8 PDE4D chr5 59783769 - ERCC8 chr5 60198335 - Exonic hg19 BRCA TCGA-HN-A2NL-01A 2 5 5'UTR-CDS Intra-chr q12.1 q12.1 Seq+ 21954 ChimerSeq STARFusion TCGA_RNA-Seq DDX11-ITGA10 DDX11 chr12 31231471 + ITGA10 chr1 145527613 + Exonic hg19 BRCA TCGA-HN-A2NL-01A 2 4 Out-of-frame Inter-chr p11.21 q21.1 Oncogene Seq+ 21955 ChimerSeq STARFusion TCGA_RNA-Seq TMEM135-ALDH3B2 TMEM135 chr11 86749228 + ALDH3B2 chr11 67435106 - Exonic hg19 BRCA TCGA-A8-A09C-01A 46 290 5'UTR-5'UTR Intra-chr q14.2 q13.2 Seq+ 21956 ChimerSeq STARFusion TCGA_RNA-Seq TMEM135-ALDH3B2 TMEM135 chr11 86749228 + ALDH3B2 chr11 67434487 - Exonic hg19 BRCA TCGA-A8-A09C-01A 40 290 5'UTR-5'UTR Intra-chr q14.2 q13.2 Seq+ 21957 ChimerSeq STARFusion TCGA_RNA-Seq CBX4-EFCAB5 CBX4 chr17 77811636 - EFCAB5 chr17 28418889 + Exonic hg19 BRCA TCGA-A8-A09C-01A 45 176 Out-of-frame Intra-chr q25.3 q11.2 Seq+ 21958 ChimerSeq STARFusion TCGA_RNA-Seq CBX4-EFCAB5 CBX4 chr17 77811636 - EFCAB5 chr17 28434852 + Exonic hg19 BRCA TCGA-A8-A09C-01A 22 176 Out-of-frame Intra-chr q25.3 q11.2 Seq+ 21959 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-NDUFS4 SSH2 chr17 28256956 - NDUFS4 chr5 52899282 + Exonic hg19 BRCA TCGA-A8-A09C-01A 44 65 Out-of-frame Inter-chr q11.2 q11.2 Seq+ 21960 ChimerSeq STARFusion TCGA_RNA-Seq ZFP91-RAB6A ZFP91 chr11 58352357 + RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-A8-A09C-01A 6 25 Out-of-frame Intra-chr q12.1 Transcription factor q13.4 Seq+ 21961 ChimerSeq STARFusion TCGA_RNA-Seq NARS2-INTS4 NARS2 chr11 78239888 - INTS4 chr11 77590173 - Exonic hg19 BRCA TCGA-A8-A09C-01A 5 11 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 21962 ChimerSeq STARFusion TCGA_RNA-Seq USP22-MYH10 USP22 chr17 20919065 - MYH10 chr17 8508300 - Exonic hg19 BRCA TCGA-A8-A09C-01A 4 5 Out-of-frame Intra-chr p11.2 p13.1 Seq+ 21963 ChimerSeq STARFusion TCGA_RNA-Seq GFRA1-ZNF577 GFRA1 chr10 117884732 - ZNF577 chr19 52381768 - Exonic hg19 BRCA TCGA-A8-A09C-01A 3 0 Out-of-frame Inter-chr q25.3 q13.41 Transcription factor 21964 ChimerSeq STARFusion TCGA_RNA-Seq LOC100506368-ALDH3B2 LOC100506368 chr11 86669068 + ALDH3B2 chr11 67435106 - Exonic hg19 BRCA TCGA-A8-A09C-01A 2 1 5'UTR-5'UTR Intra-chr q13.2 21965 ChimerSeq STARFusion TCGA_RNA-Seq RSPRY1-CEP78 RSPRY1 chr16 57220363 + CEP78 chr9 80869752 + Exonic hg19 BRCA TCGA-A8-A09C-01A 2 0 5'UTR-CDS Inter-chr q13 q21.2 21966 ChimerSeq STARFusion TCGA_RNA-Seq IGFBP4-RNA45S5 IGFBP4 chr17 38613608 + RNA45S5 chrUn_gl000220 114840 + Exonic hg19 BRCA TCGA-A7-A3IY-01A 3 9 Out-of-frame Inter-chr q21.2 Tumor suppressor gene 21967 ChimerSeq STARFusion TCGA_RNA-Seq ADAM10-FIZ1 ADAM10 chr15 58957296 - FIZ1 chr19 56109267 - Exonic hg19 BRCA TCGA-A7-A0DA-01A 27 80 3'UTR-5'UTR Inter-chr q21.3 q13.42 Transcription factor Seq+ 21968 ChimerSeq STARFusion TCGA_RNA-Seq USP33-TARS USP33 chr1 78225328 - TARS chr5 33445430 + Exonic hg19 BRCA TCGA-A7-A0DA-01A 26 47 5'UTR-CDS Inter-chr p31.1 Tumor suppressor gene p13.3 Seq+ 21969 ChimerSeq STARFusion TCGA_RNA-Seq AGAP1-RINT1 AGAP1 chr2 236792093 + RINT1 chr7 105204180 + Exonic hg19 BRCA TCGA-A7-A0DA-01A 23 35 In-Frame Inter-chr q37.2 q22.3 Tumor suppressor gene Seq+ 21970 ChimerSeq STARFusion TCGA_RNA-Seq SNAP47-PRSS38 SNAP47 chr1 227923200 + PRSS38 chr1 228033171 + Exonic hg19 BRCA TCGA-A7-A0DA-01A 8 5 Out-of-frame Intra-chr q42.13 q42.13 Seq+ 21971 ChimerSeq STARFusion TCGA_RNA-Seq SNAP47-PRSS38 SNAP47 chr1 227923200 + PRSS38 chr1 228033655 + Exonic hg19 BRCA TCGA-A7-A0DA-01A 7 5 In-Frame Intra-chr q42.13 q42.13 Seq+ 21972 ChimerSeq STARFusion TCGA_RNA-Seq PDP2-LOC100507412 PDP2 chr16 66918273 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-A7-A0DA-01A 3 6 CDS-5'UTR Inter-chr q22.1 21973 ChimerSeq STARFusion TCGA_RNA-Seq XRCC6-GPX5 XRCC6 chr22 42018090 + GPX5 chr6 28497228 + Exonic hg19 BRCA TCGA-A7-A0DA-01A 2 6 Out-of-frame Inter-chr q13.2 Seq+ 21974 ChimerSeq STARFusion TCGA_RNA-Seq UBE3C-DNAJB6 UBE3C chr7 157024021 + DNAJB6 chr7 157151241 + Exonic hg19 BRCA TCGA-A7-A0DA-01A 2 2 CDS-5'UTR Intra-chr q36.3 q36.3 Seq+ 21975 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R9A-SUCO PPP1R9A chr7 94898019 + SUCO chr1 172577887 + Exonic hg19 BRCA TCGA-A7-A0DA-01A 2 1 Out-of-frame Inter-chr q21.3 q24.3 Seq+ 21976 ChimerSeq STARFusion TCGA_RNA-Seq RPTOR-BAIAP2 RPTOR chr17 78617610 + BAIAP2 chr17 79027468 + Exonic hg19 BRCA TCGA-A7-A0DA-01A 2 1 In-Frame Intra-chr q25.3 q25.3 21977 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R2-TYMP PPP6R2 chr22 50810579 + TYMP chr22 50966146 - Exonic hg19 BRCA TCGA-BH-A0W4-01A 2 0 5'UTR-CDS Intra-chr q13.33 q13.33 21978 ChimerSeq STARFusion TCGA_RNA-Seq CAPZB-SCEL CAPZB chr1 19670852 - SCEL chr13 78208514 + Exonic hg19 BRCA TCGA-E2-A573-01A 45 156 In-Frame Inter-chr p36.13 q22.3 Seq+ 21979 ChimerSeq STARFusion TCGA_RNA-Seq BMPR2-CYP20A1 BMPR2 chr2 203332412 + CYP20A1 chr2 204116690 + Exonic hg19 BRCA TCGA-E2-A573-01A 2 1 3'UTR-CDS Intra-chr q33.1 TKL:STKR Tumor suppressor gene q33.2 21980 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-NAP1L3 IGL@ chr22 23223565 + NAP1L3 chrX 92928576 - Exonic hg19 BRCA TCGA-D8-A1JB-01A 66 0 Out-of-frame Inter-chr q11.22 q21.32 21981 ChimerSeq STARFusion TCGA_RNA-Seq WDR81-IGH@ WDR81 chr17 1639358 + IGH@ chr14 106330839 - Exonic hg19 BRCA TCGA-A8-A06T-01A 39 0 Out-of-frame Inter-chr 32.33 21982 ChimerSeq STARFusion TCGA_RNA-Seq WDR81-IGHG3 WDR81 chr17 1639358 + IGHG3 chr14 106330839 - Exonic hg19 BRCA TCGA-A8-A06T-01A 39 0 Out-of-frame Inter-chr 21983 ChimerSeq STARFusion TCGA_RNA-Seq WDR81-IGHJ3 WDR81 chr17 1639358 + IGHJ3 chr14 106330839 - Exonic hg19 BRCA TCGA-A8-A06T-01A 39 0 Out-of-frame Inter-chr q32.33 21984 ChimerSeq STARFusion TCGA_RNA-Seq ASCC3-ATL1 ASCC3 chr6 101053444 - ATL1 chr14 51094749 + Exonic hg19 BRCA TCGA-A8-A06T-01A 2 15 Out-of-frame Inter-chr q16.3 q22.1 Seq+ 21985 ChimerSeq STARFusion TCGA_RNA-Seq KAT6A-IKBKB KAT6A chr8 41905896 - IKBKB chr8 42146152 + Exonic hg19 BRCA TCGA-A8-A06T-01A 3 11 In-Frame Intra-chr p11.21 Oncogene p11.21 Oncogene Seq+ 21986 ChimerSeq STARFusion TCGA_RNA-Seq KAT6A-IKBKB KAT6A chr8 41905896 - IKBKB chr8 42147674 + Exonic hg19 BRCA TCGA-A8-A06T-01A 2 11 Out-of-frame Intra-chr p11.21 Oncogene p11.21 Oncogene Seq+ 21987 ChimerSeq STARFusion TCGA_RNA-Seq HPRT1-CTPS2 HPRT1 chrX 133609394 + CTPS2 chrX 16657366 - Exonic hg19 BRCA TCGA-AR-A24W-01A 252 645 In-Frame Intra-chr q26.2 p22.2 Seq+ 21988 ChimerSeq STARFusion TCGA_RNA-Seq FAM122B-GPC4 FAM122B chrX 133915851 - GPC4 chrX 132458564 - Exonic hg19 BRCA TCGA-AR-A24W-01A 3 4 Out-of-frame Intra-chr q26.3 q26.2 Seq+ 21989 ChimerSeq STARFusion TCGA_RNA-Seq MTL5-SUV420H1 MTL5 chr11 68514676 - SUV420H1 chr11 67957619 - Exonic hg19 BRCA TCGA-A2-A0YK-01A 5 28 CDS-5'UTR Intra-chr 21990 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-CACNA1C TBL1XR1 chr3 176816254 - CACNA1C chr12 2721069 + Exonic hg19 BRCA TCGA-D8-A27V-01A 41 192 5'UTR-CDS Inter-chr q26.32 p13.33 Seq+ 21991 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-CACNA1C TBL1XR1 chr3 176804753 - CACNA1C chr12 2721069 + Exonic hg19 BRCA TCGA-D8-A27V-01A 18 186 5'UTR-CDS Inter-chr q26.32 p13.33 Seq+ 21992 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-CACNA1C TBL1XR1 chr3 176914909 - CACNA1C chr12 2721069 + Exonic hg19 BRCA TCGA-D8-A27V-01A 8 186 5'UTR-CDS Inter-chr q26.32 p13.33 Seq+ 21993 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSD1 PRSS27 chr16 2763530 - TPSD1 chr16 1308333 + Exonic hg19 BRCA TCGA-D8-A1XM-01A 12 6 In-Frame Intra-chr p13.3 p13.3 21994 ChimerSeq STARFusion TCGA_RNA-Seq ING5-UTRN ING5 chr2 242651486 + UTRN chr6 145148484 + Exonic hg19 BRCA TCGA-GM-A2DN-01A 2 0 In-Frame Inter-chr q37.3 Tumor suppressor gene q24.2 21995 ChimerSeq STARFusion TCGA_RNA-Seq SIL1-NRG2 SIL1 chr5 138456724 - NRG2 chr5 139267096 - Exonic hg19 BRCA TCGA-BH-A0H9-01A 26 93 In-Frame Intra-chr q31.2 q31.2 Seq+ 21996 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-CYSTM1 ANKHD1 chr5 139876863 + CYSTM1 chr5 139574031 + Exonic hg19 BRCA TCGA-BH-A0H9-01A 12 44 CDS-5'UTR Intra-chr q31.3 q31.3 21997 ChimerSeq STARFusion TCGA_RNA-Seq NRG2-CYSTM1 NRG2 chr5 139421955 - CYSTM1 chr5 139622890 + Exonic hg19 BRCA TCGA-BH-A0H9-01A 15 26 In-Frame Intra-chr q31.2 q31.3 Seq+ 21998 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-CYSTM1 ANKHD1 chr5 139866645 + CYSTM1 chr5 139574031 + Exonic hg19 BRCA TCGA-BH-A0H9-01A 9 44 CDS-5'UTR Intra-chr q31.3 q31.3 21999 ChimerSeq STARFusion TCGA_RNA-Seq UQCC1-SAMHD1 UQCC1 chr20 33981895 - SAMHD1 chr20 35575207 - Exonic hg19 BRCA TCGA-BH-A0H9-01A 6 30 Out-of-frame Intra-chr q11.22 q11.23 Seq+ 22000 ChimerSeq STARFusion TCGA_RNA-Seq SLC9A8-CCDC64B SLC9A8 chr20 48431726 + CCDC64B chr16 3081151 - Exonic hg19 BRCA TCGA-BH-A0H9-01A 9 15 Out-of-frame Inter-chr q13.13 Seq+ 22001 ChimerSeq STARFusion TCGA_RNA-Seq ZNF253-LINC00466 ZNF253 chr19 19976808 + LINC00466 chr1 63628353 - Exonic hg19 BRCA TCGA-AO-A0JC-01A 2 2 CDS-3'UTR Inter-chr p13.11 Transcription factor p31.3 Seq+ 22002 ChimerSeq STARFusion TCGA_RNA-Seq ITPR1-MED13L ITPR1 chr3 4536190 + MED13L chr12 116675510 - Exonic hg19 BRCA TCGA-AO-A0JC-01A 2 0 5'UTR-CDS Inter-chr p26.1 q24.21 22003 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R2B-CCDC91 PPP2R2B chr5 146257565 - CCDC91 chr12 28544237 + Exonic hg19 BRCA TCGA-AO-A0JC-01A 2 0 Out-of-frame Inter-chr q32 p11.22 Seq+ 22004 ChimerSeq STARFusion TCGA_RNA-Seq WFDC2-PI3 WFDC2 chr20 44099172 + PI3 chr20 43804502 + Exonic hg19 BRCA TCGA-AQ-A54N-01A 44 203 In-Frame Intra-chr q13.12 q13.12 Seq+ 22005 ChimerSeq STARFusion TCGA_RNA-Seq SF3B3-COG4 SF3B3 chr16 70569323 + COG4 chr16 70543924 - Exonic hg19 BRCA TCGA-AQ-A54N-01A 9 64 In-Frame Intra-chr q22.1 q22.1 Seq+ 22006 ChimerSeq STARFusion TCGA_RNA-Seq SF3B3-COG4 SF3B3 chr16 70572359 + COG4 chr16 70544143 - Exonic hg19 BRCA TCGA-AQ-A54N-01A 7 64 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 22007 ChimerSeq STARFusion TCGA_RNA-Seq HERC1-KIAA0101 HERC1 chr15 64045157 - KIAA0101 chr15 64658274 - Exonic hg19 BRCA TCGA-AQ-A54N-01A 9 21 Out-of-frame Intra-chr q22.31 Seq+ 22008 ChimerSeq STARFusion TCGA_RNA-Seq PPP1CB-PLB1 PPP1CB chr2 28975042 + PLB1 chr2 28804935 + Exonic hg19 BRCA TCGA-AQ-A54N-01A 3 21 Out-of-frame Intra-chr p23.2 p23.2 Seq+ 22009 ChimerSeq STARFusion TCGA_RNA-Seq NEBL-SKIDA1 NEBL chr10 21461312 - SKIDA1 chr10 21812800 - Exonic hg19 BRCA TCGA-AQ-A54N-01A 3 18 Out-of-frame Intra-chr p12.31 p12.31 Seq+ 22010 ChimerSeq STARFusion TCGA_RNA-Seq GID4-RAI1 GID4 chr17 17948520 + RAI1 chr17 17714048 + Exonic hg19 BRCA TCGA-AQ-A54N-01A 4 12 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 22011 ChimerSeq STARFusion TCGA_RNA-Seq SPINT2-LGALS7B SPINT2 chr19 38755638 + LGALS7B chr19 39280256 + Exonic hg19 BRCA TCGA-AQ-A54N-01A 3 16 Out-of-frame Intra-chr q13.2 Tumor suppressor gene Seq+ 22012 ChimerSeq STARFusion TCGA_RNA-Seq STUB1-RAB40C STUB1 chr16 730684 + RAB40C chr16 675432 + Exonic hg19 BRCA TCGA-AQ-A54N-01A 3 2 In-Frame Intra-chr p13.3 Tumor suppressor gene p13.3 Seq+ 22013 ChimerSeq STARFusion TCGA_RNA-Seq GPRC5A-PRH2 GPRC5A chr12 13044598 + PRH2 chr12 11082868 + Exonic hg19 BRCA TCGA-AQ-A54N-01A 2 4 5'UTR-CDS Intra-chr p13.1 Tumor suppressor gene 22014 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-MYC PVT1 chr8 128806980 + MYC chr8 128750494 + Exonic hg19 BRCA TCGA-AQ-A54N-01A 2 3 5'UTR-CDS Intra-chr q24.21 q24.21 Oncogene Transcription factor KB Pub Seq+ 22015 ChimerSeq STARFusion TCGA_RNA-Seq APPBP2-DNAH17 APPBP2 chr17 58603155 - DNAH17 chr17 76437281 - Exonic hg19 BRCA TCGA-C8-A1HL-01A 4 6 Out-of-frame Intra-chr q23.2 q25.3 Seq+ 22016 ChimerSeq STARFusion TCGA_RNA-Seq LITAF-BCAR4 LITAF chr16 11680742 - BCAR4 chr16 11914154 - Exonic hg19 BRCA TCGA-C8-A1HL-01A 2 3 5'UTR-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 22017 ChimerSeq STARFusion TCGA_RNA-Seq PWWP2A-IQGAP2 PWWP2A chr5 159545812 - IQGAP2 chr5 75858221 + Exonic hg19 BRCA TCGA-AR-A0U2-01A 17 44 In-Frame Intra-chr q33.3 q13.3 Tumor suppressor gene Seq+ 22018 ChimerSeq STARFusion TCGA_RNA-Seq NDUFAF6-PLEKHF2 NDUFAF6 chr8 96060786 + PLEKHF2 chr8 96166259 + Exonic hg19 BRCA TCGA-AR-A0U2-01A 2 2 Out-of-frame Intra-chr q22.1 q22.1 22019 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-HOXA10 CPSF6 chr12 69656342 + HOXA10 chr7 27211792 - Exonic hg19 BRCA TCGA-AR-A0U2-01A 2 1 3'UTR-3'UTR Inter-chr q15 p15.2 Transcription factor 22020 ChimerSeq STARFusion TCGA_RNA-Seq ARMC2-VAV3 ARMC2 chr6 109197553 + VAV3 chr1 108231028 - Exonic hg19 BRCA TCGA-AR-A0U2-01A 2 0 Out-of-frame Inter-chr q21 p13.3 22021 ChimerSeq STARFusion TCGA_RNA-Seq ERBB4-SNHG16 ERBB4 chr2 213403173 - SNHG16 chr17 74557370 + Exonic hg19 BRCA TCGA-AR-A0U2-01A 2 0 Out-of-frame Inter-chr q34 Oncogene Tumor suppressor gene q25.1 22022 ChimerSeq STARFusion TCGA_RNA-Seq MCM8-LCORL MCM8 chr20 5944005 + LCORL chr4 17847524 - Exonic hg19 BRCA TCGA-AR-A0U2-01A 2 0 In-Frame Inter-chr p12.3 p15.31 Transcription factor 22023 ChimerSeq STARFusion TCGA_RNA-Seq NFIX-DAND5 NFIX chr19 13201204 + DAND5 chr19 13084203 + Exonic hg19 BRCA TCGA-C8-A26X-01A 37 66 3'UTR-CDS Intra-chr p13.13 Transcription factor p13.13 Seq+ 22024 ChimerSeq STARFusion TCGA_RNA-Seq NLK-BCAS3 NLK chr17 26495683 + BCAS3 chr17 59067332 + Exonic hg19 BRCA TCGA-C8-A26X-01A 20 17 In-Frame Intra-chr q11.2 CMGC:MAPK q23.2 Seq+ 22025 ChimerSeq STARFusion TCGA_RNA-Seq BSDC1-YARS BSDC1 chr1 32852380 - YARS chr1 33276658 - Exonic hg19 BRCA TCGA-C8-A26X-01A 13 40 In-Frame Intra-chr p35.1 p35.1 Seq+ 22026 ChimerSeq STARFusion TCGA_RNA-Seq JDP2-VRTN JDP2 chr14 75928233 + VRTN chr14 74823486 + Exonic hg19 BRCA TCGA-C8-A26X-01A 13 29 CDS-5'UTR Intra-chr q24.3 Tumor suppressor gene Transcription factor q24.3 Seq+ 22027 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-PIK3CA TBL1XR1 chr3 176914909 - PIK3CA chr3 178916538 + Exonic hg19 BRCA TCGA-C8-A26X-01A 12 11 5'UTR-5'UTR Intra-chr q26.32 q26.32 Oncogene Seq+ 22028 ChimerSeq STARFusion TCGA_RNA-Seq RBM28-MLL3 RBM28 chr7 127961319 - MLL3 chr7 151882716 - Exonic hg19 BRCA TCGA-C8-A26X-01A 2 50 Out-of-frame Intra-chr q32.1 Tumor suppressor gene Seq+ 22029 ChimerSeq STARFusion TCGA_RNA-Seq MLLT6-ACE MLLT6 chr17 36868267 + ACE chr17 61573755 + Exonic hg19 BRCA TCGA-C8-A26X-01A 4 34 Out-of-frame Intra-chr q12 q23.3 Seq+ 22030 ChimerSeq STARFusion TCGA_RNA-Seq ITGB4-SLC16A5 ITGB4 chr17 73747192 + SLC16A5 chr17 73094133 + Exonic hg19 BRCA TCGA-C8-A26X-01A 9 11 In-Frame Intra-chr q25.1 q25.1 Seq+ 22031 ChimerSeq STARFusion TCGA_RNA-Seq STK11-GPX4 STK11 chr19 1222005 + GPX4 chr19 1105185 + Exonic hg19 BRCA TCGA-C8-A26X-01A 4 23 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 22032 ChimerSeq STARFusion TCGA_RNA-Seq MAML3-LOC100129858 MAML3 chr4 141074014 - LOC100129858 chr4 141214577 - Exonic hg19 BRCA TCGA-C8-A26X-01A 4 15 CDS-3'UTR Intra-chr q31.1 22033 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-PRR11 CLTC chr17 57697534 + PRR11 chr17 57247109 + Exonic hg19 BRCA TCGA-C8-A26X-01A 4 11 CDS-5'UTR Intra-chr q23.1 q22 Seq+ 22034 ChimerSeq STARFusion TCGA_RNA-Seq MC1R-ZNF276 MC1R chr16 89984555 + ZNF276 chr16 89807212 + Exonic hg19 BRCA TCGA-C8-A26X-01A 3 6 Out-of-frame Intra-chr q24.3 q24.3 Transcription factor 22035 ChimerSeq STARFusion TCGA_RNA-Seq BLVRA-STK17A BLVRA chr7 43843446 + STK17A chr7 43635500 + Exonic hg19 BRCA TCGA-C8-A26X-01A 2 3 In-Frame Intra-chr p13 p13 Seq+ 22036 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-FGFR1 WHSC1L1 chr8 38162105 - FGFR1 chr8 38285611 - Exonic hg19 BRCA TCGA-C8-A26X-01A 2 3 In-Frame Intra-chr p11.23 Tumor suppressor gene p11.23 TK:FGFR Oncogene Seq+ 22037 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-RNF8 ZFAND3 chr6 38029551 + RNF8 chr6 37328222 + Exonic hg19 BRCA TCGA-C8-A26X-01A 2 2 Out-of-frame Intra-chr p21.2 p21.2 Tumor suppressor gene Seq+ 22038 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPF-ATAD1 HNRNPF chr10 43904579 - ATAD1 chr10 89574369 - Exonic hg19 BRCA TCGA-AC-A3EH-01A 21 23 5'UTR-5'UTR Intra-chr q11.21 Seq+ 22039 ChimerSeq STARFusion TCGA_RNA-Seq UBE2Q2-NRG4 UBE2Q2 chr15 76183355 + NRG4 chr15 76235995 - Exonic hg19 BRCA TCGA-AC-A3EH-01A 10 20 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 22040 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-ITGB5 NCOR2 chr12 125020111 - ITGB5 chr3 124528003 - Exonic hg19 BRCA TCGA-AC-A3EH-01A 5 15 5'UTR-CDS Inter-chr q24.31 q21.2 Seq+ 22041 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-ITGB5 NCOR2 chr12 125051854 - ITGB5 chr3 124528003 - Exonic hg19 BRCA TCGA-AC-A3EH-01A 2 15 5'UTR-CDS Inter-chr q24.31 q21.2 Seq+ 22042 ChimerSeq STARFusion TCGA_RNA-Seq ALDH1L2-LOC643339 ALDH1L2 chr12 105478167 - LOC643339 chr12 93647897 - Exonic hg19 BRCA TCGA-AC-A3EH-01A 3 2 3'UTR-3'UTR Intra-chr q23.3 22043 ChimerSeq STARFusion TCGA_RNA-Seq PLXNA1-NUDT4 PLXNA1 chr3 126710409 + NUDT4 chr12 93788385 + Exonic hg19 BRCA TCGA-AC-A3EH-01A 2 1 In-Frame Inter-chr q21.3 q22 22044 ChimerSeq STARFusion TCGA_RNA-Seq PLXNA1-NUDT4P1 PLXNA1 chr3 126710409 + NUDT4P1 chr12 93788385 + Exonic hg19 BRCA TCGA-AC-A3EH-01A 2 1 CDS-5'UTR Inter-chr q21.3 q21.2 22045 ChimerSeq STARFusion TCGA_RNA-Seq KCNJ12-GLI1 KCNJ12 chr17 21319506 + GLI1 chr12 57859856 + Exonic hg19 BRCA TCGA-LL-A740-01A 14 31 Out-of-frame Inter-chr p11.2 q13.3 Tumor suppressor gene Transcription factor 22046 ChimerSeq STARFusion TCGA_RNA-Seq HIVEP1-DST HIVEP1 chr6 12136125 + DST chr6 56325052 - Exonic hg19 BRCA TCGA-LL-A740-01A 5 21 Out-of-frame Intra-chr p24.1 Tumor suppressor gene Transcription factor p12.1 Oncogene Seq+ 22047 ChimerSeq STARFusion TCGA_RNA-Seq NUP153-NEDD9 NUP153 chr6 17688627 - NEDD9 chr6 11306388 - Exonic hg19 BRCA TCGA-LL-A740-01A 6 8 CDS-5'UTR Intra-chr p22.3 p24.2 Seq+ 22048 ChimerSeq STARFusion TCGA_RNA-Seq SBNO1-CLSPN SBNO1 chr12 123794257 - CLSPN chr1 36186581 - Exonic hg19 BRCA TCGA-LL-A740-01A 2 18 CDS-3'UTR Inter-chr q24.31 p34.3 Seq+ 22049 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-PPP1R1B KANSL1 chr17 44239843 - PPP1R1B chr17 37783559 + Exonic hg19 BRCA TCGA-A8-A09G-01A 17 86 Out-of-frame Intra-chr q12 Tumor suppressor gene Seq+ 22050 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-PPP1R1B KANSL1 chr17 44248221 - PPP1R1B chr17 37783559 + Exonic hg19 BRCA TCGA-A8-A09G-01A 13 84 CDS-5'UTR Intra-chr q12 Tumor suppressor gene Seq+ 22051 ChimerSeq STARFusion TCGA_RNA-Seq LRRC8D-C1orf168 LRRC8D chr1 90309341 + C1orf168 chr1 57233611 - Exonic hg19 BRCA TCGA-A8-A09G-01A 14 61 5'UTR-CDS Intra-chr p22.2 p32.2 Seq+ 22052 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-PPP1R1B KANSL1 chr17 44248221 - PPP1R1B chr17 37785423 + Exonic hg19 BRCA TCGA-A8-A09G-01A 5 84 Out-of-frame Intra-chr q12 Tumor suppressor gene Seq+ 22053 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-PPP1R1B KANSL1 chr17 44244846 - PPP1R1B chr17 37783559 + Exonic hg19 BRCA TCGA-A8-A09G-01A 3 84 Out-of-frame Intra-chr q12 Tumor suppressor gene Seq+ 22054 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-PPP1R1B KANSL1 chr17 44270189 - PPP1R1B chr17 37785423 + Exonic hg19 BRCA TCGA-A8-A09G-01A 2 84 5'UTR-5'UTR Intra-chr q12 Tumor suppressor gene Seq+ 22055 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CALU IGH@ chr14 106691670 - CALU chr7 128411746 + Exonic hg19 BRCA TCGA-A8-A09G-01A 21 3 Out-of-frame Inter-chr 32.33 q32.1 22056 ChimerSeq STARFusion TCGA_RNA-Seq LRRC8D-C1orf168 LRRC8D chr1 90309341 + C1orf168 chr1 57216876 - Exonic hg19 BRCA TCGA-A8-A09G-01A 2 61 5'UTR-CDS Intra-chr p22.2 p32.2 Seq+ 22057 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-PRKAA2 BCAS3 chr17 58885437 + PRKAA2 chr1 57157067 + Exonic hg19 BRCA TCGA-A8-A09G-01A 2 29 In-Frame Inter-chr q23.2 p32.2 Tumor suppressor gene Seq+ 22058 ChimerSeq STARFusion TCGA_RNA-Seq SKA2-GRN SKA2 chr17 57208642 - GRN chr17 42426526 + Exonic hg19 BRCA TCGA-A8-A09G-01A 3 8 CDS-5'UTR Intra-chr q22 q21.31 22059 ChimerSeq STARFusion TCGA_RNA-Seq TUSC3-SORBS3 TUSC3 chr8 15480758 + SORBS3 chr8 22421500 + Exonic hg19 BRCA TCGA-AO-A03T-01A 2 5 In-Frame Intra-chr p22 p21.3 Seq+ 22060 ChimerSeq STARFusion TCGA_RNA-Seq SNX9-DAP SNX9 chr6 158323077 + DAP chr5 10683683 - Exonic hg19 BRCA TCGA-A8-A09X-01A 7 17 In-Frame Inter-chr q25.3 p15.2 Seq+ 22061 ChimerSeq STARFusion TCGA_RNA-Seq DAP-SNX9 DAP chr5 10748287 - SNX9 chr6 158327160 + Exonic hg19 BRCA TCGA-A8-A09X-01A 7 14 In-Frame Inter-chr p15.2 q25.3 Seq+ 22062 ChimerSeq STARFusion TCGA_RNA-Seq SHROOM3-FABP5 SHROOM3 chr4 77701799 + FABP5 chr8 82192771 + Exonic hg19 BRCA TCGA-A8-A09X-01A 5 10 Out-of-frame Inter-chr q21.1 q21.13 Seq+ 22063 ChimerSeq STARFusion TCGA_RNA-Seq PNPLA2-NOC4L PNPLA2 chr11 818958 + NOC4L chr12 132635526 + Exonic hg19 BRCA TCGA-A8-A09X-01A 2 1 5'UTR-CDS Inter-chr p15.5 q24.33 22064 ChimerSeq STARFusion TCGA_RNA-Seq STK11IP-S100A16 STK11IP chr2 220473038 + S100A16 chr1 153580599 - Exonic hg19 BRCA TCGA-BH-A0DZ-01A 3 1 Out-of-frame Inter-chr q35 q21.3 Seq+ 22065 ChimerSeq STARFusion TCGA_RNA-Seq STAT3-ZSWIM7 STAT3 chr17 40474303 - ZSWIM7 chr17 15880406 - Exonic hg19 BRCA TCGA-BH-A0DZ-01A 3 0 CDS-3'UTR Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor p12 22066 ChimerSeq STARFusion TCGA_RNA-Seq CHD2-LOC100507217 CHD2 chr15 93444529 + LOC100507217 chr15 93428745 + Exonic hg19 BRCA TCGA-BH-A0DZ-01A 2 1 CDS-5'UTR Intra-chr q26.1 22067 ChimerSeq STARFusion TCGA_RNA-Seq PMM2-PPP2R3C PMM2 chr16 8900264 + PPP2R3C chr14 35560413 - Exonic hg19 BRCA TCGA-BH-A0DZ-01A 2 1 Out-of-frame Inter-chr p13.2 q13.2 Seq+ 22068 ChimerSeq STARFusion TCGA_RNA-Seq CCNL2-ANKRD65 CCNL2 chr1 1333613 - ANKRD65 chr1 1354929 - Exonic hg19 BRCA TCGA-AC-A8OR-01A 3 11 In-Frame Intra-chr p36.33 p36.33 Seq+ 22069 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD12-MTHFD2L ANKRD12 chr18 9221997 + MTHFD2L chr4 75091019 + Exonic hg19 BRCA TCGA-A2-A4S3-01A 7 55 In-Frame Inter-chr p11.22 q13.3 Seq+ 22070 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-LOC100131089 ESR1 chr6 152023140 + LOC100131089 chr15 40357422 + Exonic hg19 BRCA TCGA-A2-A4S3-01A 4 20 5'UTR-5'UTR Inter-chr q25.1 Oncogene Tumor suppressor gene Transcription factor 22071 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-CCDC170 ESR1 chr6 152023140 + CCDC170 chr6 151936578 + Exonic hg19 BRCA TCGA-A2-A4S3-01A 4 16 5'UTR-CDS Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 KB Pub Seq+ 22072 ChimerSeq STARFusion TCGA_RNA-Seq ELMOD3-TCF7L1 ELMOD3 chr2 85589383 + TCF7L1 chr2 85536152 + Exonic hg19 BRCA TCGA-A2-A4S3-01A 2 9 Out-of-frame Intra-chr p11.2 p11.2 Oncogene Transcription factor Seq+ 22073 ChimerSeq STARFusion TCGA_RNA-Seq LEMD3-XPOT LEMD3 chr12 65612399 + XPOT chr12 64833024 + Exonic hg19 BRCA TCGA-C8-A1HN-01A 22 150 In-Frame Intra-chr q14.3 q14.2 Seq+ 22074 ChimerSeq STARFusion TCGA_RNA-Seq ARMC1-RB1CC1 ARMC1 chr8 66534498 - RB1CC1 chr8 53547528 - Exonic hg19 BRCA TCGA-C8-A1HN-01A 30 69 Out-of-frame Intra-chr q13.1 q11.23 Tumor suppressor gene Seq+ 22075 ChimerSeq STARFusion TCGA_RNA-Seq LEMD3-XPOT LEMD3 chr12 65612399 + XPOT chr12 64838855 + Exonic hg19 BRCA TCGA-C8-A1HN-01A 16 111 In-Frame Intra-chr q14.3 q14.2 Seq+ 22076 ChimerSeq STARFusion TCGA_RNA-Seq DOCK1-PCDH15 DOCK1 chr10 129179632 + PCDH15 chr10 56287637 - Exonic hg19 BRCA TCGA-C8-A1HN-01A 12 50 Out-of-frame Intra-chr q26.2 q21.1 Seq+ 22077 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-ZNF207 TAOK1 chr17 27871093 + ZNF207 chr17 30708322 + Exonic hg19 BRCA TCGA-C8-A1HN-01A 11 52 Out-of-frame Intra-chr q11.2 q11.2 Transcription factor Seq+ 22078 ChimerSeq STARFusion TCGA_RNA-Seq DOCK1-PCDH15 DOCK1 chr10 128860040 + PCDH15 chr10 56424050 - Exonic hg19 BRCA TCGA-C8-A1HN-01A 2 48 CDS-5'UTR Intra-chr q26.2 q21.1 Seq+ 22079 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD17-RPRD1B ANKRD17 chr4 73979509 - RPRD1B chr20 36694483 + Exonic hg19 BRCA TCGA-C8-A1HN-01A 5 28 Out-of-frame Inter-chr q13.3 q11.23 Seq+ 22080 ChimerSeq STARFusion TCGA_RNA-Seq PTPN1-SLC9A8 PTPN1 chr20 49127127 + SLC9A8 chr20 48481265 + Exonic hg19 BRCA TCGA-C8-A1HN-01A 4 31 Out-of-frame Intra-chr q13.13 Tumor suppressor gene q13.13 Seq+ 22081 ChimerSeq STARFusion TCGA_RNA-Seq RPRD1B-ANKRD17 RPRD1B chr20 36694658 + ANKRD17 chr4 73964237 - Exonic hg19 BRCA TCGA-C8-A1HN-01A 5 24 Out-of-frame Inter-chr q11.23 q13.3 Seq+ 22082 ChimerSeq STARFusion TCGA_RNA-Seq LRBA-ESF1 LRBA chr4 151719233 - ESF1 chr20 13699631 - Exonic hg19 BRCA TCGA-C8-A1HN-01A 3 23 Out-of-frame Inter-chr q31.3 p12.1 Seq+ 22083 ChimerSeq STARFusion TCGA_RNA-Seq DYNLRB1-ERGIC3 DYNLRB1 chr20 33114148 + ERGIC3 chr20 34130072 + Exonic hg19 BRCA TCGA-C8-A1HN-01A 5 12 In-Frame Intra-chr q11.22 q11.22 Seq+ 22084 ChimerSeq STARFusion TCGA_RNA-Seq OVOL2-KIAA0922 OVOL2 chr20 18037301 - KIAA0922 chr4 154553870 + Exonic hg19 BRCA TCGA-C8-A1HN-01A 5 12 Out-of-frame Inter-chr p11.23 Transcription factor q31.3 Seq+ 22085 ChimerSeq STARFusion TCGA_RNA-Seq CTNNBL1-TTI1 CTNNBL1 chr20 36322554 + TTI1 chr20 36642259 - Exonic hg19 BRCA TCGA-C8-A1HN-01A 4 14 CDS-5'UTR Intra-chr q11.23 q11.23 Seq+ 22086 ChimerSeq STARFusion TCGA_RNA-Seq DSTN-TCFL5 DSTN chr20 17550856 + TCFL5 chr20 61473449 - Exonic hg19 BRCA TCGA-C8-A1HN-01A 4 14 In-Frame Intra-chr p12.1 q13.33 Transcription factor Seq+ 22087 ChimerSeq STARFusion TCGA_RNA-Seq KLHDC4-SPG7 KLHDC4 chr16 87782279 - SPG7 chr16 89611056 + Exonic hg19 BRCA TCGA-C8-A1HN-01A 4 13 Out-of-frame Intra-chr q24.2 q24.3 Seq+ 22088 ChimerSeq STARFusion TCGA_RNA-Seq COX18-INPP4B COX18 chr4 73930967 - INPP4B chr4 143582049 - Exonic hg19 BRCA TCGA-C8-A1HN-01A 3 13 CDS-5'UTR Intra-chr q13.3 q31.21 Tumor suppressor gene Seq+ 22089 ChimerSeq STARFusion TCGA_RNA-Seq COX18-INPP4B COX18 chr4 73930967 - INPP4B chr4 143383879 - Exonic hg19 BRCA TCGA-C8-A1HN-01A 3 13 CDS-5'UTR Intra-chr q13.3 q31.21 Tumor suppressor gene Seq+ 22090 ChimerSeq STARFusion TCGA_RNA-Seq EIF4EBP1-ADAM12 EIF4EBP1 chr8 37888236 + ADAM12 chr10 127734701 - Exonic hg19 BRCA TCGA-C8-A1HN-01A 2 13 Out-of-frame Inter-chr p11.23 q26.2 Seq+ 22091 ChimerSeq STARFusion TCGA_RNA-Seq TRPC4AP-DYNLRB1 TRPC4AP chr20 33622926 - DYNLRB1 chr20 33128385 + Exonic hg19 BRCA TCGA-C8-A1HN-01A 2 13 In-Frame Intra-chr q11.22 q11.22 Seq+ 22092 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-AVPR1A FRS2 chr12 69864310 + AVPR1A chr12 63547768 - Exonic hg19 BRCA TCGA-C8-A1HN-01A 3 7 5'UTR-5'UTR Intra-chr q15 q14.2 22093 ChimerSeq STARFusion TCGA_RNA-Seq ULK2-DOCK6 ULK2 chr17 19741814 - DOCK6 chr19 11364402 - Exonic hg19 BRCA TCGA-AN-A0XT-01A 6 18 Out-of-frame Inter-chr p11.2 Other:ULK p13.2 Seq+ 22094 ChimerSeq STARFusion TCGA_RNA-Seq PPP4R2-FOXP1 PPP4R2 chr3 73047309 + FOXP1 chr3 71161788 - Exonic hg19 BRCA TCGA-AN-A0XT-01A 5 18 Out-of-frame Intra-chr p13 p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 22095 ChimerSeq STARFusion TCGA_RNA-Seq DHPS-HOOK2 DHPS chr19 12792332 - HOOK2 chr19 12878238 - Exonic hg19 BRCA TCGA-AN-A0XT-01A 5 2 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 22096 ChimerSeq STARFusion TCGA_RNA-Seq ALAS1-HHEX ALAS1 chr3 52242227 + HHEX chr10 94449946 + Exonic hg19 BRCA TCGA-AN-A0XT-01A 3 1 Out-of-frame Inter-chr p21.2 q23.33 Transcription factor Seq+ 22097 ChimerSeq STARFusion TCGA_RNA-Seq AHCYL1-DENND2D AHCYL1 chr1 110527794 + DENND2D chr1 111737348 - Exonic hg19 BRCA TCGA-E9-A5FK-01A 3 6 In-Frame Intra-chr p13.3 Tumor suppressor gene p13.2 Tumor suppressor gene Seq+ 22098 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80954854 - MRPS28 chr8 80831382 - Exonic hg19 BRCA TCGA-E9-A5FK-01A 3 2 Out-of-frame Intra-chr q21.13 q21.13 22099 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 BRCA TCGA-E9-A5FK-01A 2 0 In-Frame Intra-chr p11.21 p11.21 22100 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-ABCA8 BCAS3 chr17 58885437 + ABCA8 chr17 66865920 - Exonic hg19 BRCA TCGA-EW-A1OX-01A 15 77 In-Frame Intra-chr q23.2 q24.2 Seq+ 22101 ChimerSeq STARFusion TCGA_RNA-Seq TBCD-STXBP4 TBCD chr17 80863929 + STXBP4 chr17 53218671 + Exonic hg19 BRCA TCGA-EW-A1OX-01A 5 15 Out-of-frame Intra-chr q22 Seq+ 22102 ChimerSeq STARFusion TCGA_RNA-Seq ZNF652-CD300LD ZNF652 chr17 47394188 - CD300LD chr17 72578450 - Exonic hg19 BRCA TCGA-EW-A1OX-01A 3 12 Out-of-frame Intra-chr q21.33 Transcription factor q25.1 Seq+ 22103 ChimerSeq STARFusion TCGA_RNA-Seq TBCD-STXBP4 TBCD chr17 80867183 + STXBP4 chr17 53218671 + Exonic hg19 BRCA TCGA-EW-A1OX-01A 2 15 Out-of-frame Intra-chr q22 Seq+ 22104 ChimerSeq STARFusion TCGA_RNA-Seq MLL3-LOC100507412 MLL3 chr7 152132711 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-EW-A1IY-01A 17 240 CDS-5'UTR Inter-chr Tumor suppressor gene 22105 ChimerSeq STARFusion TCGA_RNA-Seq SRPK1-FGFR1OP2 SRPK1 chr6 35825038 - FGFR1OP2 chr12 27107078 + Exonic hg19 BRCA TCGA-EW-A1IY-01A 2 0 CDS-5'UTR Inter-chr p21.31 CMGC:SRPK p11.23 22106 ChimerSeq STARFusion TCGA_RNA-Seq KHDRBS3-ADI1 KHDRBS3 chr8 136594316 + ADI1 chr2 3504764 - Exonic hg19 BRCA TCGA-GI-A2C9-01A 29 77 In-Frame Inter-chr q24.23 Seq+ 22107 ChimerSeq STARFusion TCGA_RNA-Seq ZMIZ1-NSMCE4A ZMIZ1 chr10 80976031 + NSMCE4A chr10 123733596 - Exonic hg19 BRCA TCGA-GI-A2C9-01A 11 38 In-Frame Intra-chr q22.3 q26.13 Seq+ 22108 ChimerSeq STARFusion TCGA_RNA-Seq BPTF-PITPNC1 BPTF chr17 65944422 + PITPNC1 chr17 65665624 + Exonic hg19 BRCA TCGA-GI-A2C9-01A 5 52 In-Frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 22109 ChimerSeq STARFusion TCGA_RNA-Seq ZMIZ1-NSMCE4A ZMIZ1 chr10 80976031 + NSMCE4A chr10 123730584 - Exonic hg19 BRCA TCGA-GI-A2C9-01A 7 38 In-Frame Intra-chr q22.3 q26.13 Seq+ 22110 ChimerSeq STARFusion TCGA_RNA-Seq ADI1-KHDRBS3 ADI1 chr2 3517628 - KHDRBS3 chr8 136619198 + Exonic hg19 BRCA TCGA-GI-A2C9-01A 3 27 In-Frame Inter-chr q24.23 Seq+ 22111 ChimerSeq STARFusion TCGA_RNA-Seq MIAT-TMEM230 MIAT chr22 27068950 + TMEM230 chr20 5090091 - Exonic hg19 BRCA TCGA-GI-A2C9-01A 6 15 5'UTR-5'UTR Inter-chr q12.1 p12.3 Seq+ 22112 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-PHF12 FAM222B chr17 27169700 - PHF12 chr17 27254081 - Exonic hg19 BRCA TCGA-GI-A2C9-01A 3 19 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 22113 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G3-DDOST EIF4G3 chr1 21267984 - DDOST chr1 20982680 - Exonic hg19 BRCA TCGA-GI-A2C9-01A 4 12 In-Frame Intra-chr p36.12 p36.12 Seq+ 22114 ChimerSeq STARFusion TCGA_RNA-Seq MST4-ZC4H2 MST4 chrX 131207121 + ZC4H2 chrX 64141868 - Exonic hg19 BRCA TCGA-GI-A2C9-01A 3 16 In-Frame Intra-chr STE:STE20 q11.2 22115 ChimerSeq STARFusion TCGA_RNA-Seq TCF12-MGST2 TCF12 chr15 57213296 + MGST2 chr4 140599697 + Exonic hg19 BRCA TCGA-GI-A2C9-01A 3 16 In-Frame Inter-chr q21.3 Oncogene Transcription factor q31.1 Seq+ 22116 ChimerSeq STARFusion TCGA_RNA-Seq CD99L2-ARHGAP36 CD99L2 chrX 149999704 - ARHGAP36 chrX 130215734 + Exonic hg19 BRCA TCGA-GI-A2C9-01A 4 8 Out-of-frame Intra-chr q28 q26.1 Seq+ 22117 ChimerSeq STARFusion TCGA_RNA-Seq EP300-IPO5 EP300 chr22 41489102 + IPO5 chr13 98634757 + Exonic hg19 BRCA TCGA-GI-A2C9-01A 4 8 Out-of-frame Inter-chr q13.2 Oncogene q32.2 Seq+ 22118 ChimerSeq STARFusion TCGA_RNA-Seq NF2-HSD3B2 NF2 chr22 30000101 + HSD3B2 chr1 119957954 + Exonic hg19 BRCA TCGA-GI-A2C9-01A 3 8 CDS-5'UTR Inter-chr q12.2 Oncogene Tumor suppressor gene p12 Seq+ 22119 ChimerSeq STARFusion TCGA_RNA-Seq EHBP1-MDH1 EHBP1 chr2 63170985 + MDH1 chr2 63831830 + Exonic hg19 BRCA TCGA-GI-A2C9-01A 3 2 In-Frame Intra-chr p15 p15 Seq+ 22120 ChimerSeq STARFusion TCGA_RNA-Seq ZFAS1-RCN2 ZFAS1 chr20 47895745 + RCN2 chr15 77236099 + Exonic hg19 BRCA TCGA-GI-A2C9-01A 2 5 Out-of-frame Inter-chr q13.13 Tumor suppressor gene q24.3 22121 ChimerSeq STARFusion TCGA_RNA-Seq STT3A-PRKG1 STT3A chr11 125474142 + PRKG1 chr10 53667267 + Exonic hg19 BRCA TCGA-GI-A2C9-01A 2 2 Out-of-frame Inter-chr q24.2 q11.23 22122 ChimerSeq STARFusion TCGA_RNA-Seq TTC28-CHEK2 TTC28 chr22 29075610 - CHEK2 chr22 29121355 - Exonic hg19 BRCA TCGA-GI-A2C9-01A 2 1 Out-of-frame Intra-chr q12.1 q12.1 Oncogene Tumor suppressor gene 22123 ChimerSeq STARFusion TCGA_RNA-Seq DLG1-TM4SF19 DLG1 chr3 197009550 - TM4SF19 chr3 196054462 - Exonic hg19 BRCA TCGA-BH-A1FL-01A 25 50 CDS-5'UTR Intra-chr q29 Tumor suppressor gene q29 Seq+ 22124 ChimerSeq STARFusion TCGA_RNA-Seq TTLL1-PACSIN2 TTLL1 chr22 43442416 - PACSIN2 chr22 43308163 - Exonic hg19 BRCA TCGA-BH-A1FL-01A 2 1 CDS-5'UTR Intra-chr q13.2 q13.2 22125 ChimerSeq STARFusion TCGA_RNA-Seq WTAPP1-NEK11 WTAPP1 chr11 102663992 + NEK11 chr3 131068401 + Exonic hg19 BRCA TCGA-BH-A1FL-01A 2 0 Out-of-frame Inter-chr q22.2 q22.1 Other:NEK 22126 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 BRCA TCGA-JL-A3YX-01A 9 8 In-Frame Intra-chr p13.3 p13.3 22127 ChimerSeq STARFusion TCGA_RNA-Seq MYO5A-OIP5 MYO5A chr15 52689398 - OIP5 chr15 41611978 - Exonic hg19 BRCA TCGA-JL-A3YX-01A 6 11 In-Frame Intra-chr q21.2 q15.1 Seq+ 22128 ChimerSeq STARFusion TCGA_RNA-Seq UNC13C-NUSAP1 UNC13C chr15 54305731 + NUSAP1 chr15 41657600 + Exonic hg19 BRCA TCGA-JL-A3YX-01A 3 18 Out-of-frame Intra-chr q21.3 q15.1 22129 ChimerSeq STARFusion TCGA_RNA-Seq ZNF124-AHCTF1 ZNF124 chr1 247322308 - AHCTF1 chr1 247081679 - Exonic hg19 BRCA TCGA-S3-AA10-01A 2 10 In-Frame Intra-chr q44 Transcription factor q44 Transcription factor Seq+ 22130 ChimerSeq STARFusion TCGA_RNA-Seq AEBP2-TACC1P1 AEBP2 chr12 19593661 + TACC1P1 chr10 37811939 + Exonic hg19 BRCA TCGA-S3-AA10-01A 2 5 Out-of-frame Inter-chr p12.3 Transcription factor p11.21 Seq+ 22131 ChimerSeq STARFusion TCGA_RNA-Seq FOXK1-ZNF671 FOXK1 chr7 4722499 + ZNF671 chr19 58234708 - Exonic hg19 BRCA TCGA-S3-AA10-01A 2 5 Out-of-frame Inter-chr p22.1 Transcription factor q13.43 Transcription factor Seq+ 22132 ChimerSeq STARFusion TCGA_RNA-Seq PDXDC1-LMF1 PDXDC1 chr16 15102704 + LMF1 chr16 943072 - Exonic hg19 BRCA TCGA-AN-A046-01A 31 67 In-Frame Intra-chr p13.11 p13.3 Seq+ 22133 ChimerSeq STARFusion TCGA_RNA-Seq LINC00993-TACC1P1 LINC00993 chr10 37635757 + TACC1P1 chr10 37811939 + Exonic hg19 BRCA TCGA-AN-A046-01A 17 32 Out-of-frame Intra-chr p11.21 p11.21 22134 ChimerSeq STARFusion TCGA_RNA-Seq ATP8A2P1-TACC1P1 ATP8A2P1 chr10 37635757 + TACC1P1 chr10 37811939 + Exonic hg19 BRCA TCGA-AN-A046-01A 10 8 Out-of-frame Intra-chr p11.21 p11.21 22135 ChimerSeq STARFusion TCGA_RNA-Seq USP32-RAD51C USP32 chr17 58469243 - RAD51C chr17 56772292 + Exonic hg19 BRCA TCGA-AO-A0J5-01A 11 55 In-Frame Intra-chr q23.2 q22 Tumor suppressor gene Seq+ 22136 ChimerSeq STARFusion TCGA_RNA-Seq FAM49B-KAT6A FAM49B chr8 130883621 - KAT6A chr8 41792385 - Exonic hg19 BRCA TCGA-AO-A0J5-01A 12 36 Out-of-frame Intra-chr q24.21 p11.21 Oncogene Seq+ 22137 ChimerSeq STARFusion TCGA_RNA-Seq CYB561-USP32 CYB561 chr17 61523606 - USP32 chr17 58422969 - Exonic hg19 BRCA TCGA-AO-A0J5-01A 14 18 5'UTR-CDS Intra-chr q23.3 q23.2 Seq+ 22138 ChimerSeq STARFusion TCGA_RNA-Seq USP32-RAD51C USP32 chr17 58469243 - RAD51C chr17 56774054 + Exonic hg19 BRCA TCGA-AO-A0J5-01A 2 55 Out-of-frame Intra-chr q23.2 q22 Tumor suppressor gene Seq+ 22139 ChimerSeq STARFusion TCGA_RNA-Seq KIF13B-TMEM66 KIF13B chr8 29003895 - TMEM66 chr8 29927575 - Exonic hg19 BRCA TCGA-AO-A0J5-01A 5 33 In-Frame Intra-chr p12 Seq+ 22140 ChimerSeq STARFusion TCGA_RNA-Seq VMP1-MARCH10 VMP1 chr17 57895134 + 2019_ 3_ 10_ chr17 60788705 - Exonic hg19 BRCA TCGA-AO-A0J5-01A 10 10 Out-of-frame Intra-chr q23.1 q23.2 Seq+ 22141 ChimerSeq STARFusion TCGA_RNA-Seq COA1-MRPS24 COA1 chr7 43769028 - MRPS24 chr7 43908673 - Exonic hg19 BRCA TCGA-AO-A0J5-01A 6 21 Out-of-frame Intra-chr p13 p13 Seq+ 22142 ChimerSeq STARFusion TCGA_RNA-Seq ARSG-ANKFN1 ARSG chr17 66347827 + ANKFN1 chr17 54569548 + Exonic hg19 BRCA TCGA-AO-A0J5-01A 6 17 CDS-3'UTR Intra-chr q24.2 q22 Seq+ 22143 ChimerSeq STARFusion TCGA_RNA-Seq FUT8-FNTB FUT8 chr14 65922436 + FNTB chr14 65470967 + Exonic hg19 BRCA TCGA-AO-A0J5-01A 5 20 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 22144 ChimerSeq STARFusion TCGA_RNA-Seq ARSG-BPTF ARSG chr17 66287709 + BPTF chr17 65899905 + Exonic hg19 BRCA TCGA-AO-A0J5-01A 8 6 5'UTR-CDS Intra-chr q24.2 q24.2 Transcription factor Seq+ 22145 ChimerSeq STARFusion TCGA_RNA-Seq CYB561-USP32 CYB561 chr17 61523259 - USP32 chr17 58422969 - Exonic hg19 BRCA TCGA-AO-A0J5-01A 5 18 5'UTR-CDS Intra-chr q23.3 q23.2 Seq+ 22146 ChimerSeq STARFusion TCGA_RNA-Seq NOL11-HSF5 NOL11 chr17 65739702 + HSF5 chr17 56499791 - Exonic hg19 BRCA TCGA-AO-A0J5-01A 7 10 Out-of-frame Intra-chr q24.2 q22 Transcription factor Seq+ 22147 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP32-FCHSD2 ARHGAP32 chr11 129034214 - FCHSD2 chr11 72794785 - Exonic hg19 BRCA TCGA-AO-A0J5-01A 3 12 Out-of-frame Intra-chr q24.3 q13.4 Seq+ 22148 ChimerSeq STARFusion TCGA_RNA-Seq RAB11FIP1-UNC5D RAB11FIP1 chr8 37734627 - UNC5D chr8 35647877 + Exonic hg19 BRCA TCGA-S3-A6ZH-01A 12 191 Out-of-frame Intra-chr p11.23 p12 Tumor suppressor gene Seq+ 22149 ChimerSeq STARFusion TCGA_RNA-Seq PC-PPP6R3 PC chr11 66719901 - PPP6R3 chr11 68370810 + Exonic hg19 BRCA TCGA-S3-A6ZH-01A 21 142 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 22150 ChimerSeq STARFusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165531 + PPP1CA chr11 67165885 - Exonic hg19 BRCA TCGA-S3-A6ZH-01A 12 7 Out-of-frame Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 22151 ChimerSeq STARFusion TCGA_RNA-Seq PC-ANO1 PC chr11 66725793 - ANO1 chr11 69951840 + Exonic hg19 BRCA TCGA-S3-A6ZH-01A 7 5 5'UTR-5'UTR Intra-chr q13.2 q13.3 Seq+ 22152 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R2-FCGRT PPP6R2 chr22 50810579 + FCGRT chr19 50027764 + Exonic hg19 BRCA TCGA-S3-A6ZH-01A 2 0 5'UTR-CDS Inter-chr q13.33 q13.33 22153 ChimerSeq STARFusion TCGA_RNA-Seq CAPRIN1-COMMD9 CAPRIN1 chr11 34104588 + COMMD9 chr11 36297790 - Exonic hg19 BRCA TCGA-BH-A0E2-01A 8 23 Out-of-frame Intra-chr p13 p13 Seq+ 22154 ChimerSeq STARFusion TCGA_RNA-Seq RAB12-FAM19A2 RAB12 chr18 8633325 + FAM19A2 chr12 62261207 - Exonic hg19 BRCA TCGA-BH-A0E2-01A 3 7 CDS-5'UTR Inter-chr p11.22 q14.1 Seq+ 22155 ChimerSeq STARFusion TCGA_RNA-Seq EHBP1-FLJ30838 EHBP1 chr2 63101667 + FLJ30838 chr2 59077565 + Exonic hg19 BRCA TCGA-BH-A0E2-01A 2 6 CDS-5'UTR Intra-chr p15 Seq+ 22156 ChimerSeq STARFusion TCGA_RNA-Seq CARS2-SMN1 CARS2 chr13 111340068 - SMN1 chr5 70247768 + Exonic hg19 BRCA TCGA-BH-A0E2-01A 2 1 Out-of-frame Inter-chr q34 22157 ChimerSeq STARFusion TCGA_RNA-Seq CARS2-SMN2 CARS2 chr13 111340068 - SMN2 chr5 70247768 + Exonic hg19 BRCA TCGA-BH-A0E2-01A 2 1 Out-of-frame Inter-chr q34 22158 ChimerSeq STARFusion TCGA_RNA-Seq CLSTN1-CTNNBIP1 CLSTN1 chr1 9833330 - CTNNBIP1 chr1 9910834 - Exonic hg19 BRCA TCGA-AR-A0TU-01A 40 117 In-Frame Intra-chr p36.22 p36.22 Tumor suppressor gene Seq+ 22159 ChimerSeq STARFusion TCGA_RNA-Seq GALNT18-CARM1P1 GALNT18 chr11 11642906 - CARM1P1 chr9 2948282 - Exonic hg19 BRCA TCGA-AR-A0TU-01A 9 17 Out-of-frame Inter-chr p15.4 p24.2 Seq+ 22160 ChimerSeq STARFusion TCGA_RNA-Seq TMCC1-ACTR10 TMCC1 chr3 129546646 - ACTR10 chr14 58669573 + Exonic hg19 BRCA TCGA-AR-A0TU-01A 7 17 Out-of-frame Inter-chr q22.1 q23.1 Seq+ 22161 ChimerSeq STARFusion TCGA_RNA-Seq TMCC1-ACTR10 TMCC1 chr3 129513167 - ACTR10 chr14 58669573 + Exonic hg19 BRCA TCGA-AR-A0TU-01A 6 17 5'UTR-CDS Inter-chr q22.1 q23.1 Seq+ 22162 ChimerSeq STARFusion TCGA_RNA-Seq CARM1-SMARCA4 CARM1 chr19 11031803 + SMARCA4 chr19 11172460 + Exonic hg19 BRCA TCGA-AR-A0TU-01A 2 8 Out-of-frame Intra-chr p13.2 p13.2 Oncogene Tumor suppressor gene Seq+ 22163 ChimerSeq STARFusion TCGA_RNA-Seq ANP32A-LRRC6 ANP32A chr15 69113037 - LRRC6 chr8 133650353 - Exonic hg19 BRCA TCGA-AR-A0TU-01A 2 7 Out-of-frame Inter-chr q23 Tumor suppressor gene q24.22 Seq+ 22164 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38092208 + MIPOL1 chr14 37892060 + Exonic hg19 BRCA TCGA-B6-A0WS-01A 10 15 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 22165 ChimerSeq STARFusion TCGA_RNA-Seq ZNF121-OLFM2 ZNF121 chr19 9695137 - OLFM2 chr19 9971470 - Exonic hg19 BRCA TCGA-D8-A1XU-01A 27 64 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.2 Seq+ 22166 ChimerSeq STARFusion TCGA_RNA-Seq TTC39A-CRISP1 TTC39A chr1 51760063 - CRISP1 chr6 49819842 - Exonic hg19 BRCA TCGA-BH-A209-01A 37 394 In-Frame Inter-chr p32.3 p12.3 Seq+ 22167 ChimerSeq STARFusion TCGA_RNA-Seq PDS5B-UBR2 PDS5B chr13 33160730 + UBR2 chr6 42658770 + Exonic hg19 BRCA TCGA-BH-A209-01A 107 111 5'UTR-CDS Inter-chr q13.1 Tumor suppressor gene p21.1 Seq+ 22168 ChimerSeq STARFusion TCGA_RNA-Seq TTC39A-CRISP1 TTC39A chr1 51760063 - CRISP1 chr6 49834273 - Exonic hg19 BRCA TCGA-BH-A209-01A 17 394 CDS-5'UTR Inter-chr p32.3 p12.3 Seq+ 22169 ChimerSeq STARFusion TCGA_RNA-Seq TTC39A-CRISP1 TTC39A chr1 51760063 - CRISP1 chr6 49825115 - Exonic hg19 BRCA TCGA-BH-A209-01A 15 394 CDS-5'UTR Inter-chr p32.3 p12.3 Seq+ 22170 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-PCDHGA1 ANKHD1 chr5 139866645 + PCDHGA1 chr5 140884960 + Exonic hg19 BRCA TCGA-BH-A209-01A 23 83 Out-of-frame Intra-chr q31.3 q31.3 22171 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-PCDHGA10 ANKHD1 chr5 139866645 + PCDHGA10 chr5 140884960 + Exonic hg19 BRCA TCGA-BH-A209-01A 23 83 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 22172 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-PCDHGA11 ANKHD1 chr5 139866645 + PCDHGA11 chr5 140884960 + Exonic hg19 BRCA TCGA-BH-A209-01A 23 83 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 22173 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-PCDHGA12 ANKHD1 chr5 139866645 + PCDHGA12 chr5 140884960 + Exonic hg19 BRCA TCGA-BH-A209-01A 23 83 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 22174 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-PCDHGA2 ANKHD1 chr5 139866645 + PCDHGA2 chr5 140884960 + Exonic hg19 BRCA TCGA-BH-A209-01A 23 83 Out-of-frame Intra-chr q31.3 q31.3 22175 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-PCDHGA3 ANKHD1 chr5 139866645 + PCDHGA3 chr5 140884960 + Exonic hg19 BRCA TCGA-BH-A209-01A 23 83 Out-of-frame Intra-chr q31.3 q31.3 22176 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-PCDHGA4 ANKHD1 chr5 139866645 + PCDHGA4 chr5 140884960 + Exonic hg19 BRCA TCGA-BH-A209-01A 23 83 Out-of-frame Intra-chr q31.3 q31.3 22177 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-PCDHGA5 ANKHD1 chr5 139866645 + PCDHGA5 chr5 140884960 + Exonic hg19 BRCA TCGA-BH-A209-01A 23 83 Out-of-frame Intra-chr q31.3 q31.3 22178 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-PCDHGA6 ANKHD1 chr5 139866645 + PCDHGA6 chr5 140884960 + Exonic hg19 BRCA TCGA-BH-A209-01A 23 83 Out-of-frame Intra-chr q31.3 q31.3 22179 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-PCDHGA7 ANKHD1 chr5 139866645 + PCDHGA7 chr5 140884960 + Exonic hg19 BRCA TCGA-BH-A209-01A 23 83 Out-of-frame Intra-chr q31.3 q31.3 22180 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-PCDHGA8 ANKHD1 chr5 139866645 + PCDHGA8 chr5 140884960 + Exonic hg19 BRCA TCGA-BH-A209-01A 23 83 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 22181 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-PCDHGA9 ANKHD1 chr5 139866645 + PCDHGA9 chr5 140884960 + Exonic hg19 BRCA TCGA-BH-A209-01A 23 83 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 22182 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-PCDHGB1 ANKHD1 chr5 139866645 + PCDHGB1 chr5 140884960 + Exonic hg19 BRCA TCGA-BH-A209-01A 23 83 Out-of-frame Intra-chr q31.3 q31.3 22183 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-PCDHGB2 ANKHD1 chr5 139866645 + PCDHGB2 chr5 140884960 + Exonic hg19 BRCA TCGA-BH-A209-01A 23 83 Out-of-frame Intra-chr q31.3 q31.3 22184 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-PCDHGB3 ANKHD1 chr5 139866645 + PCDHGB3 chr5 140884960 + Exonic hg19 BRCA TCGA-BH-A209-01A 23 83 Out-of-frame Intra-chr q31.3 q31.3 22185 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-PCDHGB4 ANKHD1 chr5 139866645 + PCDHGB4 chr5 140884960 + Exonic hg19 BRCA TCGA-BH-A209-01A 23 83 Out-of-frame Intra-chr q31.3 q31.3 22186 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-PCDHGB5 ANKHD1 chr5 139866645 + PCDHGB5 chr5 140884960 + Exonic hg19 BRCA TCGA-BH-A209-01A 23 83 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 22187 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-PCDHGB6 ANKHD1 chr5 139866645 + PCDHGB6 chr5 140884960 + Exonic hg19 BRCA TCGA-BH-A209-01A 23 83 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 22188 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-PCDHGB7 ANKHD1 chr5 139866645 + PCDHGB7 chr5 140884960 + Exonic hg19 BRCA TCGA-BH-A209-01A 23 83 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 22189 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-PCDHGC3 ANKHD1 chr5 139866645 + PCDHGC3 chr5 140884960 + Exonic hg19 BRCA TCGA-BH-A209-01A 23 83 Out-of-frame Intra-chr q31.3 q31.3 Tumor suppressor gene Seq+ 22190 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-PCDHGC4 ANKHD1 chr5 139866645 + PCDHGC4 chr5 140884960 + Exonic hg19 BRCA TCGA-BH-A209-01A 23 83 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 22191 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-PCDHGC5 ANKHD1 chr5 139866645 + PCDHGC5 chr5 140884960 + Exonic hg19 BRCA TCGA-BH-A209-01A 23 83 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 22192 ChimerSeq STARFusion TCGA_RNA-Seq ZNF791-FGFR1 ZNF791 chr19 12730134 + FGFR1 chr8 38275874 - Exonic hg19 BRCA TCGA-BH-A209-01A 4 60 Out-of-frame Inter-chr p13.13 Transcription factor p11.23 TK:FGFR Oncogene Seq+ 22193 ChimerSeq STARFusion TCGA_RNA-Seq FAF1-LRRC7 FAF1 chr1 51323601 - LRRC7 chr1 70257726 + Exonic hg19 BRCA TCGA-BH-A209-01A 2 17 In-Frame Intra-chr p32.3 p31.1 Seq+ 22194 ChimerSeq STARFusion TCGA_RNA-Seq ADCY9-CREBBP ADCY9 chr16 4163751 - CREBBP chr16 3901010 - Exonic hg19 BRCA TCGA-A7-A26I-01A 11 41 In-Frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene 22195 ChimerSeq STARFusion TCGA_RNA-Seq CLPTM1-CYP2A7 CLPTM1 chr19 45488561 + CYP2A7 chr19 41386533 - Exonic hg19 BRCA TCGA-A7-A26I-01A 9 18 Out-of-frame Intra-chr q13.32 q13.2 Seq+ 22196 ChimerSeq STARFusion TCGA_RNA-Seq EPRS-DNAH14 EPRS chr1 220160484 - DNAH14 chr1 225506285 + Exonic hg19 BRCA TCGA-A7-A26I-01A 6 11 Out-of-frame Intra-chr q41 q42.12 Seq+ 22197 ChimerSeq STARFusion TCGA_RNA-Seq PTPRA-VPS16 PTPRA chr20 2854406 + VPS16 chr20 2840365 + Exonic hg19 BRCA TCGA-A7-A26I-01A 6 7 5'UTR-CDS Intra-chr p13 p13 Seq+ 22198 ChimerSeq STARFusion TCGA_RNA-Seq BDP1-MCCC2 BDP1 chr5 70766316 + MCCC2 chr5 70927948 + Exonic hg19 BRCA TCGA-A7-A26I-01A 3 9 In-Frame Intra-chr q13.2 22199 ChimerSeq STARFusion TCGA_RNA-Seq BDP1-MCCC2 BDP1 chr5 70766316 + MCCC2 chr5 70922467 + Exonic hg19 BRCA TCGA-A7-A26I-01A 2 9 In-Frame Intra-chr q13.2 22200 ChimerSeq STARFusion TCGA_RNA-Seq ABHD2-VAPA ABHD2 chr15 89744857 + VAPA chr18 9931891 + Exonic hg19 BRCA TCGA-A7-A26I-01A 3 0 Out-of-frame Inter-chr q26.1 p11.22 Seq+ 22201 ChimerSeq STARFusion TCGA_RNA-Seq LOC100506990-SGK223 LOC100506990 chr8 12302403 + SGK223 chr8 8197151 - Exonic hg19 BRCA TCGA-A7-A26I-01A 2 2 5'UTR-CDS Intra-chr 22202 ChimerSeq STARFusion TCGA_RNA-Seq UAP1-TSHZ2 UAP1 chr1 162551249 + TSHZ2 chr20 52103683 + Exonic hg19 BRCA TCGA-E9-A22D-01A 121 848 CDS-3'UTR Inter-chr q23.3 q13.2 Transcription factor Seq+ 22203 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL420P-IGKC RN7SL420P chr1 116149237 + IGKC chr2 89160436 - Exonic hg19 BRCA TCGA-E9-A22D-01A 93 0 Out-of-frame Inter-chr p13.1 p11.2 22204 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL420P-IGKJ4 RN7SL420P chr1 116149237 + IGKJ4 chr2 89160436 - Exonic hg19 BRCA TCGA-E9-A22D-01A 93 0 Out-of-frame Inter-chr p13.1 p11.2 22205 ChimerSeq STARFusion TCGA_RNA-Seq PHLDA3-MYBPH PHLDA3 chr1 201437469 - MYBPH chr1 203139578 - Exonic hg19 BRCA TCGA-E9-A22D-01A 19 127 3'UTR-CDS Intra-chr q32.1 Tumor suppressor gene q32.1 Seq+ 22206 ChimerSeq STARFusion TCGA_RNA-Seq MIR181A1HG-BCAS1 MIR181A1HG chr1 198869540 - BCAS1 chr20 52574036 - Exonic hg19 BRCA TCGA-E9-A22D-01A 23 82 Out-of-frame Inter-chr q32.1 q13.2 Seq+ 22207 ChimerSeq STARFusion TCGA_RNA-Seq SDF2-MAP2K6 SDF2 chr17 26982305 - MAP2K6 chr17 67532256 + Exonic hg19 BRCA TCGA-E9-A22D-01A 22 69 Out-of-frame Intra-chr q11.2 q24.3 STE:STE7 Seq+ 22208 ChimerSeq STARFusion TCGA_RNA-Seq PHLDA3-MYBPH PHLDA3 chr1 201437469 - MYBPH chr1 203139484 - Exonic hg19 BRCA TCGA-E9-A22D-01A 3 127 3'UTR-CDS Intra-chr q32.1 Tumor suppressor gene q32.1 Seq+ 22209 ChimerSeq STARFusion TCGA_RNA-Seq ATF6-SERINC3 ATF6 chr1 161833102 + SERINC3 chr20 43129941 - Exonic hg19 BRCA TCGA-E9-A22D-01A 24 39 Out-of-frame Inter-chr q23.3 Transcription factor q13.12 Seq+ 22210 ChimerSeq STARFusion TCGA_RNA-Seq MIR181A1HG-BCAS1 MIR181A1HG chr1 198869540 - BCAS1 chr20 52570234 - Exonic hg19 BRCA TCGA-E9-A22D-01A 8 82 Out-of-frame Inter-chr q32.1 q13.2 Seq+ 22211 ChimerSeq STARFusion TCGA_RNA-Seq XPO1-HORMAD1 XPO1 chr2 61725808 - HORMAD1 chr1 150692014 - Exonic hg19 BRCA TCGA-E9-A22D-01A 12 66 CDS-5'UTR Inter-chr p15 Oncogene q21.3 Seq+ 22212 ChimerSeq STARFusion TCGA_RNA-Seq HELZ2-ADA HELZ2 chr20 62203461 - ADA chr20 43264929 - Exonic hg19 BRCA TCGA-E9-A22D-01A 16 48 Out-of-frame Intra-chr q13.33 q13.12 Seq+ 22213 ChimerSeq STARFusion TCGA_RNA-Seq TTC13-JAK2 TTC13 chr1 231075132 - JAK2 chr9 5064883 + Exonic hg19 BRCA TCGA-E9-A22D-01A 14 52 In-Frame Inter-chr q42.2 p24.1 TK:JakA Oncogene Seq+ 22214 ChimerSeq STARFusion TCGA_RNA-Seq C5orf45-SLC36A4 C5orf45 chr5 179267872 - SLC36A4 chr11 92887366 - Exonic hg19 BRCA TCGA-E9-A22D-01A 11 63 Out-of-frame Inter-chr q21 22215 ChimerSeq STARFusion TCGA_RNA-Seq C5orf45-SLC36A4 C5orf45 chr5 179266474 - SLC36A4 chr11 92888062 - Exonic hg19 BRCA TCGA-E9-A22D-01A 9 63 Out-of-frame Inter-chr q21 22216 ChimerSeq STARFusion TCGA_RNA-Seq MIR181A1HG-BCAS1 MIR181A1HG chr1 198869586 - BCAS1 chr20 52570234 - Exonic hg19 BRCA TCGA-E9-A22D-01A 4 82 Out-of-frame Inter-chr q32.1 q13.2 Seq+ 22217 ChimerSeq STARFusion TCGA_RNA-Seq SDF2-MAP2K6 SDF2 chr17 26988744 - MAP2K6 chr17 67532256 + Exonic hg19 BRCA TCGA-E9-A22D-01A 5 69 Out-of-frame Intra-chr q11.2 q24.3 STE:STE7 Seq+ 22218 ChimerSeq STARFusion TCGA_RNA-Seq C5orf45-SLC36A4 C5orf45 chr5 179266583 - SLC36A4 chr11 92887369 - Exonic hg19 BRCA TCGA-E9-A22D-01A 6 63 Out-of-frame Inter-chr q21 22219 ChimerSeq STARFusion TCGA_RNA-Seq VMP1-DHCR7 VMP1 chr17 57918685 + DHCR7 chr11 71152487 - Exonic hg19 BRCA TCGA-E9-A22D-01A 9 48 Out-of-frame Inter-chr q23.1 q13.4 Seq+ 22220 ChimerSeq STARFusion TCGA_RNA-Seq MICU2-ATP8A2 MICU2 chr13 22178078 - ATP8A2 chr13 26402256 + Exonic hg19 BRCA TCGA-E9-A22D-01A 16 14 Out-of-frame Intra-chr q12.11 q12.13 Seq+ 22221 ChimerSeq STARFusion TCGA_RNA-Seq CCDC90B-PLXDC1 CCDC90B chr11 82984690 - PLXDC1 chr17 37265644 - Exonic hg19 BRCA TCGA-E9-A22D-01A 10 34 In-Frame Inter-chr q14.1 q12 Seq+ 22222 ChimerSeq STARFusion TCGA_RNA-Seq TTC13-JAK2 TTC13 chr1 231079552 - JAK2 chr9 5064883 + Exonic hg19 BRCA TCGA-E9-A22D-01A 3 52 In-Frame Inter-chr q42.2 p24.1 TK:JakA Oncogene Seq+ 22223 ChimerSeq STARFusion TCGA_RNA-Seq TTC13-JAK2 TTC13 chr1 231090079 - JAK2 chr9 5064883 + Exonic hg19 BRCA TCGA-E9-A22D-01A 3 52 In-Frame Inter-chr q42.2 p24.1 TK:JakA Oncogene Seq+ 22224 ChimerSeq STARFusion TCGA_RNA-Seq VMP1-DHCR7 VMP1 chr17 57915573 + DHCR7 chr11 71152486 - Exonic hg19 BRCA TCGA-E9-A22D-01A 4 48 Out-of-frame Inter-chr q23.1 q13.4 Seq+ 22225 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-PKD1 IGH@ chr14 106881272 - PKD1 chr16 2156274 - Exonic hg19 BRCA TCGA-E9-A22D-01A 15 0 Out-of-frame Inter-chr 32.33 p13.3 CAMK:PKD Tumor suppressor gene 22226 ChimerSeq STARFusion TCGA_RNA-Seq MIR21-DHCR7 MIR21 chr17 57918685 + DHCR7 chr11 71152487 - Exonic hg19 BRCA TCGA-E9-A22D-01A 9 20 Out-of-frame Inter-chr q23.1 q13.4 Seq+ 22227 ChimerSeq STARFusion TCGA_RNA-Seq ARSG-MAP2K6 ARSG chr17 66303228 + MAP2K6 chr17 67501921 + Exonic hg19 BRCA TCGA-E9-A22D-01A 8 21 5'UTR-CDS Intra-chr q24.2 q24.3 STE:STE7 Seq+ 22228 ChimerSeq STARFusion TCGA_RNA-Seq UAP1-PTRH2 UAP1 chr1 162551249 + PTRH2 chr17 57752182 - Exonic hg19 BRCA TCGA-E9-A22D-01A 5 31 CDS-3'UTR Inter-chr q23.3 q23.1 Seq+ 22229 ChimerSeq STARFusion TCGA_RNA-Seq PBX1-DHX40 PBX1 chr1 164532548 + DHX40 chr17 57679883 + Exonic hg19 BRCA TCGA-E9-A22D-01A 3 33 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor q23.1 Seq+ 22230 ChimerSeq STARFusion TCGA_RNA-Seq PBX1-DHX40 PBX1 chr1 164595333 + DHX40 chr17 57679883 + Exonic hg19 BRCA TCGA-E9-A22D-01A 2 30 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor q23.1 Seq+ 22231 ChimerSeq STARFusion TCGA_RNA-Seq ACACA-ASIC2 ACACA chr17 35614625 - ASIC2 chr17 31344702 - Exonic hg19 BRCA TCGA-E9-A22D-01A 5 15 Out-of-frame Intra-chr q12 Seq+ 22232 ChimerSeq STARFusion TCGA_RNA-Seq UFC1-ANO1 UFC1 chr1 161123910 + ANO1 chr11 70013348 + Exonic hg19 BRCA TCGA-E9-A22D-01A 4 13 Out-of-frame Inter-chr q23.3 q13.3 Seq+ 22233 ChimerSeq STARFusion TCGA_RNA-Seq BMP2K-SLC4A4 BMP2K chr4 79772210 + SLC4A4 chr4 72352665 + Exonic hg19 BRCA TCGA-E9-A22D-01A 3 10 In-Frame Intra-chr q21.21 q13.3 Seq+ 22234 ChimerSeq STARFusion TCGA_RNA-Seq VPS72-TSHZ2 VPS72 chr1 151156793 - TSHZ2 chr20 52103683 + Exonic hg19 BRCA TCGA-E9-A22D-01A 3 8 CDS-3'UTR Inter-chr q21.3 q13.2 Transcription factor Seq+ 22235 ChimerSeq STARFusion TCGA_RNA-Seq CDH11-PRC1 CDH11 chr16 65005482 - PRC1 chr15 91512853 - Exonic hg19 BRCA TCGA-A2-A4S1-01A 50 309 Out-of-frame Inter-chr q21 Oncogene Tumor suppressor gene q26.1 Seq+ 22236 ChimerSeq STARFusion TCGA_RNA-Seq PLA2G6-EEF1D PLA2G6 chr22 38539112 - EEF1D chr8 144662376 - Exonic hg19 BRCA TCGA-A2-A4S1-01A 12 15 In-Frame Inter-chr q13.1 Seq+ 22237 ChimerSeq STARFusion TCGA_RNA-Seq RHPN2-BLVRB RHPN2 chr19 33512477 - BLVRB chr19 40957399 - Exonic hg19 BRCA TCGA-A2-A4S1-01A 6 13 Out-of-frame Intra-chr q13.11 q13.2 Seq+ 22238 ChimerSeq STARFusion TCGA_RNA-Seq IBSP-GRWD1 IBSP chr4 88732586 + GRWD1 chr19 48949996 + Exonic hg19 BRCA TCGA-A2-A4S1-01A 9 0 Out-of-frame Inter-chr q22.1 q13.33 22239 ChimerSeq STARFusion TCGA_RNA-Seq RBM3-COL1A1 RBM3 chrX 48434090 + COL1A1 chr17 48264909 - Exonic hg19 BRCA TCGA-A2-A4S1-01A 8 1 Out-of-frame Inter-chr p11.23 q21.33 Oncogene 22240 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-C6orf89 ZFAND3 chr6 37787792 + C6orf89 chr6 36869997 + Exonic hg19 BRCA TCGA-A2-A4S1-01A 5 10 Out-of-frame Intra-chr p21.2 p21.2 Seq+ 22241 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-ANO1 CTTN chr11 70256066 + ANO1 chr11 69933858 + Exonic hg19 BRCA TCGA-A8-A07O-01A 63 175 In-Frame Intra-chr q13.3 q13.3 Seq+ 22242 ChimerSeq STARFusion TCGA_RNA-Seq TCEB3-IFT140 TCEB3 chr1 24080950 + IFT140 chr16 1608135 - Exonic hg19 BRCA TCGA-A8-A07O-01A 66 93 In-Frame Inter-chr Tumor suppressor gene p13.3 Seq+ 22243 ChimerSeq STARFusion TCGA_RNA-Seq MYO9A-TMEM59 MYO9A chr15 72208711 - TMEM59 chr1 54509198 - Exonic hg19 BRCA TCGA-A8-A07O-01A 31 128 In-Frame Inter-chr q23 p32.3 Seq+ 22244 ChimerSeq STARFusion TCGA_RNA-Seq MTR-IFI16 MTR chr1 237001899 + IFI16 chr1 159019222 + Exonic hg19 BRCA TCGA-A8-A07O-01A 14 56 In-Frame Intra-chr q43 Oncogene q23.1 Tumor suppressor gene Seq+ 22245 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-LYZ FRS2 chr12 69925836 + LYZ chr12 69743888 + Exonic hg19 BRCA TCGA-A8-A07O-01A 8 75 5'UTR-CDS Intra-chr q15 q15 Seq+ 22246 ChimerSeq STARFusion TCGA_RNA-Seq POLR2A-SLC16A13 POLR2A chr17 7399392 + SLC16A13 chr17 6941471 + Exonic hg19 BRCA TCGA-A8-A07O-01A 15 39 In-Frame Intra-chr p13.1 p13.1 Seq+ 22247 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT3-PDXK AGPAT3 chr21 45323900 + PDXK chr21 45153950 + Exonic hg19 BRCA TCGA-A8-A07O-01A 11 22 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 22248 ChimerSeq STARFusion TCGA_RNA-Seq STRBP-DENND1A STRBP chr9 126030715 - DENND1A chr9 126531842 - Exonic hg19 BRCA TCGA-A8-A07O-01A 8 33 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 22249 ChimerSeq STARFusion TCGA_RNA-Seq STRBP-DENND1A STRBP chr9 125999109 - DENND1A chr9 126531842 - Exonic hg19 BRCA TCGA-A8-A07O-01A 7 33 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 22250 ChimerSeq STARFusion TCGA_RNA-Seq SCYL2-FAM71C SCYL2 chr12 100676925 + FAM71C chr12 100043066 + Exonic hg19 BRCA TCGA-A8-A07O-01A 10 20 In-Frame Intra-chr q23.1 Other:SCY1 q23.1 Seq+ 22251 ChimerSeq STARFusion TCGA_RNA-Seq POLR2A-SLC16A13 POLR2A chr17 7399392 + SLC16A13 chr17 6940046 + Exonic hg19 BRCA TCGA-A8-A07O-01A 5 39 In-Frame Intra-chr p13.1 p13.1 Seq+ 22252 ChimerSeq STARFusion TCGA_RNA-Seq MLST8-PGP MLST8 chr16 2256197 + PGP chr16 2264054 - Exonic hg19 BRCA TCGA-A8-A07O-01A 5 36 Out-of-frame Intra-chr p13.3 p13.3 22253 ChimerSeq STARFusion TCGA_RNA-Seq SSR2-ACOT11 SSR2 chr1 155987923 - ACOT11 chr1 55073615 + Exonic hg19 BRCA TCGA-A8-A07O-01A 6 22 Out-of-frame Intra-chr q22 p32.3 Seq+ 22254 ChimerSeq STARFusion TCGA_RNA-Seq CCSER1-MMRN1 CCSER1 chr4 91048982 + MMRN1 chr4 90872756 + Exonic hg19 BRCA TCGA-A8-A07O-01A 8 12 Out-of-frame Intra-chr q22.1 q22.1 22255 ChimerSeq STARFusion TCGA_RNA-Seq PABPC1-RLIM PABPC1 chr8 101717154 - RLIM chrX 73803072 - Exonic hg19 BRCA TCGA-A8-A07O-01A 3 29 CDS-3'UTR Inter-chr q22.3 q13.2 22256 ChimerSeq STARFusion TCGA_RNA-Seq LIMK2-RUFY1 LIMK2 chr22 31621805 + RUFY1 chr5 179007948 + Exonic hg19 BRCA TCGA-A8-A07O-01A 5 14 In-Frame Inter-chr q12.2 TKL:LISK Seq+ 22257 ChimerSeq STARFusion TCGA_RNA-Seq RAB1A-SPRED2 RAB1A chr2 65357027 - SPRED2 chr2 65544017 - Exonic hg19 BRCA TCGA-A8-A07O-01A 7 5 Out-of-frame Intra-chr p14 p14 Seq+ 22258 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT3-PDXK AGPAT3 chr21 45285226 + PDXK chr21 45153950 + Exonic hg19 BRCA TCGA-A8-A07O-01A 2 22 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 22259 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD2-DNAJC5 PCMTD2 chr20 62899363 + DNAJC5 chr20 62559688 + Exonic hg19 BRCA TCGA-A8-A07O-01A 2 7 CDS-5'UTR Intra-chr q13.33 Seq+ 22260 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-SEPT9 RCC1 chr1 28834672 + SEPT9 chr17 75483506 + Exonic hg19 BRCA TCGA-A8-A07O-01A 3 3 5'UTR-CDS Inter-chr p35.3 22261 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-SEPT9 SNHG3 chr1 28834672 + SEPT9 chr17 75483506 + Exonic hg19 BRCA TCGA-A8-A07O-01A 3 3 5'UTR-CDS Inter-chr p35.3 22262 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 BRCA TCGA-A8-A07O-01A 2 2 3'UTR-5'UTR Intra-chr q34 22263 ChimerSeq STARFusion TCGA_RNA-Seq ARL8B-ITPR1 ARL8B chr3 5164273 + ITPR1 chr3 4878458 + Exonic hg19 BRCA TCGA-A8-A07O-01A 2 0 In-Frame Intra-chr p26.1 p26.1 Seq+ 22264 ChimerSeq STARFusion TCGA_RNA-Seq TRPS1-LINC00536 TRPS1 chr8 116599228 - LINC00536 chr8 117142505 - Exonic hg19 BRCA TCGA-D8-A140-01A 68 164 CDS-3'UTR Intra-chr q23.3 Transcription factor q23.3 Seq+ 22265 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61564178 - ANK3 chr10 61827767 - Exonic hg19 BRCA TCGA-D8-A140-01A 31 76 In-Frame Intra-chr q21.2 q21.2 Seq+ 22266 ChimerSeq STARFusion TCGA_RNA-Seq NSD1-ZNF346 NSD1 chr5 176619020 + ZNF346 chr5 176489059 + Exonic hg19 BRCA TCGA-D8-A140-01A 32 66 In-Frame Intra-chr q35.3 Oncogene q35.2 Transcription factor Seq+ 22267 ChimerSeq STARFusion TCGA_RNA-Seq BAZ2A-PRIM1 BAZ2A chr12 57006799 - PRIM1 chr12 57128029 - Exonic hg19 BRCA TCGA-D8-A140-01A 26 47 In-Frame Intra-chr q13.3 Transcription factor q13.3 Seq+ 22268 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-FAM168A FCHSD2 chr11 72578910 - FAM168A chr11 73179537 - Exonic hg19 BRCA TCGA-D8-A140-01A 19 40 CDS-5'UTR Intra-chr q13.4 q13.4 Seq+ 22269 ChimerSeq STARFusion TCGA_RNA-Seq PLOD2-PLSCR4 PLOD2 chr3 145878668 - PLSCR4 chr3 145939879 - Exonic hg19 BRCA TCGA-D8-A140-01A 8 28 CDS-5'UTR Intra-chr q24 q24 Seq+ 22270 ChimerSeq STARFusion TCGA_RNA-Seq ASPSCR1-COL5A3 ASPSCR1 chr17 79939176 + COL5A3 chr19 10114821 - Exonic hg19 BRCA TCGA-D8-A140-01A 7 18 5'UTR-CDS Inter-chr q25.3 p13.2 Seq+ 22271 ChimerSeq STARFusion TCGA_RNA-Seq NRF1-STRIP2 NRF1 chr7 129297414 + STRIP2 chr7 129091454 + Exonic hg19 BRCA TCGA-D8-A140-01A 8 12 Out-of-frame Intra-chr q32.2 Tumor suppressor gene Transcription factor q32.1 22272 ChimerSeq STARFusion TCGA_RNA-Seq RERE-GPR157 RERE chr1 8716032 - GPR157 chr1 9171548 - Exonic hg19 BRCA TCGA-D8-A140-01A 5 17 Out-of-frame Intra-chr p36.23 p36.22 Seq+ 22273 ChimerSeq STARFusion TCGA_RNA-Seq FBXL19-IGH@ FBXL19 chr16 30959777 + IGH@ chr14 106329450 - Exonic hg19 BRCA TCGA-D8-A140-01A 9 0 Out-of-frame Inter-chr p11.2 Transcription factor 32.33 22274 ChimerSeq STARFusion TCGA_RNA-Seq FBXL19-IGHG3 FBXL19 chr16 30959777 + IGHG3 chr14 106329450 - Exonic hg19 BRCA TCGA-D8-A140-01A 9 0 Out-of-frame Inter-chr p11.2 Transcription factor 22275 ChimerSeq STARFusion TCGA_RNA-Seq FBXL19-IGHJ6 FBXL19 chr16 30959777 + IGHJ6 chr14 106329450 - Exonic hg19 BRCA TCGA-D8-A140-01A 9 0 Out-of-frame Inter-chr p11.2 Transcription factor Seq+ 22276 ChimerSeq STARFusion TCGA_RNA-Seq INTS4-KCTD14 INTS4 chr11 77612467 - KCTD14 chr11 77728316 - Exonic hg19 BRCA TCGA-D8-A140-01A 5 10 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 22277 ChimerSeq STARFusion TCGA_RNA-Seq NEK11-ATP2C1 NEK11 chr3 130852800 + ATP2C1 chr3 130649260 + Exonic hg19 BRCA TCGA-D8-A140-01A 4 11 Out-of-frame Intra-chr q22.1 Other:NEK q22.1 Seq+ 22278 ChimerSeq STARFusion TCGA_RNA-Seq PCTP-MEI4 PCTP chr17 53851256 + MEI4 chr6 78400375 + Exonic hg19 BRCA TCGA-D8-A140-01A 3 15 Out-of-frame Inter-chr q22 q14.1 Seq+ 22279 ChimerSeq STARFusion TCGA_RNA-Seq ASPSCR1-COL5A3 ASPSCR1 chr17 79937115 + COL5A3 chr19 10114821 - Exonic hg19 BRCA TCGA-D8-A140-01A 2 18 Out-of-frame Inter-chr q25.3 p13.2 Seq+ 22280 ChimerSeq STARFusion TCGA_RNA-Seq NCSTN-CCT3 NCSTN chr1 160324080 + CCT3 chr1 156290816 - Exonic hg19 BRCA TCGA-D8-A140-01A 5 5 In-Frame Intra-chr q23.2 q22 Seq+ 22281 ChimerSeq STARFusion TCGA_RNA-Seq OLFM2-CEP112 OLFM2 chr19 10046980 - CEP112 chr17 63685336 - Exonic hg19 BRCA TCGA-D8-A140-01A 3 12 In-Frame Inter-chr p13.2 q24.1 Seq+ 22282 ChimerSeq STARFusion TCGA_RNA-Seq PRKAR1A-BCAS3 PRKAR1A chr17 66511717 + BCAS3 chr17 59445688 + Exonic hg19 BRCA TCGA-D8-A140-01A 2 13 Out-of-frame Intra-chr q24.2 Oncogene Tumor suppressor gene q23.2 Seq+ 22283 ChimerSeq STARFusion TCGA_RNA-Seq TRIM44-CD44 TRIM44 chr11 35756993 + CD44 chr11 35198122 + Exonic hg19 BRCA TCGA-D8-A140-01A 2 13 Out-of-frame Intra-chr p13 p13 Oncogene Tumor suppressor gene Seq+ 22284 ChimerSeq STARFusion TCGA_RNA-Seq SPAG9-ARL17B SPAG9 chr17 49118862 - ARL17B chr17 44352784 - Exonic hg19 BRCA TCGA-D8-A140-01A 2 12 CDS-3'UTR Intra-chr q21.33 Seq+ 22285 ChimerSeq STARFusion TCGA_RNA-Seq SOGA1-SAMHD1 SOGA1 chr20 35421652 - SAMHD1 chr20 35563592 - Exonic hg19 BRCA TCGA-D8-A140-01A 2 11 In-Frame Intra-chr q11.23 q11.23 Seq+ 22286 ChimerSeq STARFusion TCGA_RNA-Seq RAB3IP-FRS2 RAB3IP chr12 70150443 + FRS2 chr12 69924645 + Exonic hg19 BRCA TCGA-D8-A140-01A 2 6 CDS-5'UTR Intra-chr q15 q15 Seq+ 22287 ChimerSeq STARFusion TCGA_RNA-Seq SEC23B-LINC00851 SEC23B chr20 18491700 + LINC00851 chr20 18361423 + Exonic hg19 BRCA TCGA-D8-A140-01A 2 6 Out-of-frame Intra-chr p11.23 p11.23 22288 ChimerSeq STARFusion TCGA_RNA-Seq MLTK-RAPGEF4 MLTK chr2 173955918 + RAPGEF4 chr2 173825488 + Exonic hg19 BRCA TCGA-D8-A140-01A 2 5 Out-of-frame Intra-chr q31.1 22289 ChimerSeq STARFusion TCGA_RNA-Seq CASC4-TGM5 CASC4 chr15 44630515 + TGM5 chr15 43533188 - Exonic hg19 BRCA TCGA-BH-A0E6-01A 4 25 In-Frame Intra-chr q15.3 q15.2 Seq+ 22290 ChimerSeq STARFusion TCGA_RNA-Seq UHRF1BP1-LOC100507412 UHRF1BP1 chr6 34760071 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-BH-A0E6-01A 2 1 CDS-5'UTR Inter-chr p21.31 22291 ChimerSeq STARFusion TCGA_RNA-Seq GSTCD-PPA2 GSTCD chr4 106650656 + PPA2 chr4 106307793 - Exonic hg19 BRCA TCGA-BH-A0E6-01A 2 0 Out-of-frame Intra-chr q24 q24 22292 ChimerSeq STARFusion TCGA_RNA-Seq AP1M1-TPM4 AP1M1 chr19 16314389 + TPM4 chr19 16192723 + Exonic hg19 BRCA TCGA-AR-A24Q-01A 9 30 Out-of-frame Intra-chr p13.11 p13.12 22293 ChimerSeq STARFusion TCGA_RNA-Seq AP1M1-TPM4 AP1M1 chr19 16314314 + TPM4 chr19 16192723 + Exonic hg19 BRCA TCGA-AR-A24Q-01A 8 30 Out-of-frame Intra-chr p13.11 p13.12 22294 ChimerSeq STARFusion TCGA_RNA-Seq STK25-ELK2AP STK25 chr2 242434915 - ELK2AP chr14 106136184 - Exonic hg19 BRCA TCGA-AR-A24Q-01A 13 0 Out-of-frame Inter-chr q37.3 22295 ChimerSeq STARFusion TCGA_RNA-Seq RANBP17-SPDL1 RANBP17 chr5 170308900 + SPDL1 chr5 169015398 + Exonic hg19 BRCA TCGA-AR-A24Q-01A 6 26 Out-of-frame Intra-chr q35.1 q35.1 Seq+ 22296 ChimerSeq STARFusion TCGA_RNA-Seq SOX6-GALNT18 SOX6 chr11 16339992 - GALNT18 chr11 11400811 - Exonic hg19 BRCA TCGA-AR-A24Q-01A 7 12 Out-of-frame Intra-chr p15.2 Transcription factor p15.4 Seq+ 22297 ChimerSeq STARFusion TCGA_RNA-Seq PLXND1-TMCC1 PLXND1 chr3 129324172 - TMCC1 chr3 129390107 - Exonic hg19 BRCA TCGA-AR-A24Q-01A 5 19 In-Frame Intra-chr q22.1 q22.1 KB Seq+ 22298 ChimerSeq STARFusion TCGA_RNA-Seq GNAI3-CASQ2 GNAI3 chr1 110091460 + CASQ2 chr1 116287533 - Exonic hg19 BRCA TCGA-AR-A24Q-01A 3 16 Out-of-frame Intra-chr p13.3 p13.1 Seq+ 22299 ChimerSeq STARFusion TCGA_RNA-Seq ABL1-PRRC2B ABL1 chr9 133589842 + PRRC2B chr9 134305477 + Exonic hg19 BRCA TCGA-AR-A24Q-01A 3 3 CDS-5'UTR Intra-chr q34.12 TK:Abl Oncogene q34.13 22300 ChimerSeq STARFusion TCGA_RNA-Seq C11orf80-FAM161B C11orf80 chr11 66526567 + FAM161B chr14 74409418 - Exonic hg19 BRCA TCGA-AR-A24Q-01A 3 2 In-Frame Inter-chr q13.2 q24.3 Seq+ 22301 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-RAD51B UVRAG chr11 75827059 + RAD51B chr14 69061202 + Exonic hg19 BRCA TCGA-AR-A24Q-01A 2 5 Out-of-frame Inter-chr q13.5 Tumor suppressor gene q24.1 Seq+ 22302 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-DDX11L5 YWHAE chr17 1303341 - DDX11L5 chr9 12708 + Exonic hg19 BRCA TCGA-AR-A24Q-01A 3 1 Out-of-frame Inter-chr p13.3 p24.3 22303 ChimerSeq STARFusion TCGA_RNA-Seq CD58-RAD51B CD58 chr1 117113525 - RAD51B chr14 68758601 + Exonic hg19 BRCA TCGA-B6-A400-01A 3 135 Out-of-frame Inter-chr p13.1 q24.1 Seq+ 22304 ChimerSeq STARFusion TCGA_RNA-Seq TRAF3-MYO16 TRAF3 chr14 103352606 + MYO16 chr13 109318234 + Exonic hg19 BRCA TCGA-B6-A400-01A 6 49 Out-of-frame Inter-chr q32.32 Seq+ 22305 ChimerSeq STARFusion TCGA_RNA-Seq ZNF704-ETNK2 ZNF704 chr8 81552761 - ETNK2 chr1 204101384 - Exonic hg19 BRCA TCGA-B6-A400-01A 9 36 3'UTR-CDS Inter-chr q21.13 Transcription factor q32.1 Seq+ 22306 ChimerSeq STARFusion TCGA_RNA-Seq TRAF3-MYO16 TRAF3 chr14 103342862 + MYO16 chr13 109318234 + Exonic hg19 BRCA TCGA-B6-A400-01A 3 49 Out-of-frame Inter-chr q32.32 Seq+ 22307 ChimerSeq STARFusion TCGA_RNA-Seq CEPT1-HSD3BP4 CEPT1 chr1 111703918 + HSD3BP4 chr1 120106603 + Exonic hg19 BRCA TCGA-B6-A400-01A 10 11 CDS-5'UTR Intra-chr p13.3 p12 22308 ChimerSeq STARFusion TCGA_RNA-Seq FABP5-ZNF572 FABP5 chr8 82196200 + ZNF572 chr8 125989651 + Exonic hg19 BRCA TCGA-B6-A400-01A 7 8 Out-of-frame Intra-chr q21.13 q24.13 Transcription factor 22309 ChimerSeq STARFusion TCGA_RNA-Seq CEPT1-HSD3BP4 CEPT1 chr1 111702149 + HSD3BP4 chr1 120106603 + Exonic hg19 BRCA TCGA-B6-A400-01A 4 10 CDS-5'UTR Intra-chr p13.3 p12 22310 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-ID1 TPX2 chr20 30327424 + ID1 chr20 30193175 + Exonic hg19 BRCA TCGA-B6-A400-01A 4 6 5'UTR-5'UTR Intra-chr q11.21 q11.21 Seq+ 22311 ChimerSeq STARFusion TCGA_RNA-Seq CTF1-BCL7C CTF1 chr16 30910854 + BCL7C chr16 30900266 - Exonic hg19 BRCA TCGA-D8-A13Y-01A 10 21 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 22312 ChimerSeq STARFusion TCGA_RNA-Seq CLEC16A-LITAF CLEC16A chr16 11220003 + LITAF chr16 11650591 - Exonic hg19 BRCA TCGA-D8-A13Y-01A 5 33 CDS-5'UTR Intra-chr p13.13 p13.13 Tumor suppressor gene Seq+ 22313 ChimerSeq STARFusion TCGA_RNA-Seq FAM57B-GSG1L FAM57B chr16 30040753 - GSG1L chr16 27974524 - Exonic hg19 BRCA TCGA-D8-A13Y-01A 10 12 Out-of-frame Intra-chr p11.2 p12.1 Seq+ 22314 ChimerSeq STARFusion TCGA_RNA-Seq PROSC-LOC100507412 PROSC chr8 37623873 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-D8-A13Y-01A 2 35 CDS-5'UTR Inter-chr 22315 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-CYSTM1 ANKHD1 chr5 139781858 + CYSTM1 chr5 139622890 + Exonic hg19 BRCA TCGA-D8-A13Y-01A 3 2 Out-of-frame Intra-chr q31.3 q31.3 22316 ChimerSeq STARFusion TCGA_RNA-Seq YBX1-MED8 YBX1 chr1 43166717 + MED8 chr1 43851897 - Exonic hg19 BRCA TCGA-D8-A13Y-01A 2 1 3'UTR-CDS Intra-chr p34.2 Transcription factor p34.2 22317 ChimerSeq STARFusion TCGA_RNA-Seq TSC2-NPW TSC2 chr16 2100487 + NPW chr16 2070191 + Exonic hg19 BRCA TCGA-BH-A0B1-01A 24 110 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 22318 ChimerSeq STARFusion TCGA_RNA-Seq CHRNB3-RB1CC1 CHRNB3 chr8 42565577 + RB1CC1 chr8 53558427 - Exonic hg19 BRCA TCGA-BH-A0B1-01A 27 63 Out-of-frame Intra-chr p11.21 q11.23 Tumor suppressor gene Seq+ 22319 ChimerSeq STARFusion TCGA_RNA-Seq TSC2-NPW TSC2 chr16 2100487 + NPW chr16 2069551 + Exonic hg19 BRCA TCGA-BH-A0B1-01A 14 110 CDS-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 22320 ChimerSeq STARFusion TCGA_RNA-Seq MBTD1-UTP18 MBTD1 chr17 49336504 - UTP18 chr17 49343543 + Exonic hg19 BRCA TCGA-BH-A0B1-01A 19 65 5'UTR-CDS Intra-chr q21.33 q21.33 Seq+ 22321 ChimerSeq STARFusion TCGA_RNA-Seq TMPO-LOC643770 TMPO chr12 98926696 + LOC643770 chr12 98880966 - Exonic hg19 BRCA TCGA-BH-A0B1-01A 5 113 CDS-3'UTR Intra-chr q23.1 22322 ChimerSeq STARFusion TCGA_RNA-Seq TSC2-NPW TSC2 chr16 2100487 + NPW chr16 2070127 + Exonic hg19 BRCA TCGA-BH-A0B1-01A 5 110 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 22323 ChimerSeq STARFusion TCGA_RNA-Seq TMPO-LOC643770 TMPO chr12 98925616 + LOC643770 chr12 98880966 - Exonic hg19 BRCA TCGA-BH-A0B1-01A 4 113 CDS-3'UTR Intra-chr q23.1 22324 ChimerSeq STARFusion TCGA_RNA-Seq RB1CC1-CHRNB3 RB1CC1 chr8 53626635 - CHRNB3 chr8 42563860 + Exonic hg19 BRCA TCGA-BH-A0B1-01A 4 21 5'UTR-CDS Intra-chr q11.23 Tumor suppressor gene p11.21 Seq+ 22325 ChimerSeq STARFusion TCGA_RNA-Seq RNF213-CARD14 RNF213 chr17 78269613 + CARD14 chr17 78162176 + Exonic hg19 BRCA TCGA-BH-A0B1-01A 6 9 Out-of-frame Intra-chr q25.3 Oncogene q25.3 Seq+ 22326 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V1C1-EYA1 ATP6V1C1 chr8 104033453 + EYA1 chr8 72268746 - Exonic hg19 BRCA TCGA-BH-A0B1-01A 2 22 5'UTR-5'UTR Intra-chr q22.3 q13.3 Seq+ 22327 ChimerSeq STARFusion TCGA_RNA-Seq MDM1-ABCC1 MDM1 chr12 68707223 - ABCC1 chr16 16108348 + Exonic hg19 BRCA TCGA-BH-A0B1-01A 4 5 In-Frame Inter-chr q15 Seq+ 22328 ChimerSeq STARFusion TCGA_RNA-Seq ADAM9-MAP6 ADAM9 chr8 38899636 + MAP6 chr11 75319367 - Exonic hg19 BRCA TCGA-BH-A0B1-01A 3 2 Out-of-frame Inter-chr q13.5 22329 ChimerSeq STARFusion TCGA_RNA-Seq MGP-SERF2 MGP chr12 15034891 - SERF2 chr15 44069647 + Exonic hg19 BRCA TCGA-BH-A0B1-01A 3 1 Out-of-frame Inter-chr p12.3 q15.3 22330 ChimerSeq STARFusion TCGA_RNA-Seq ZNF253-LINC00466 ZNF253 chr19 19976808 + LINC00466 chr1 63628353 - Exonic hg19 BRCA TCGA-BH-A0B1-01A 2 3 CDS-3'UTR Inter-chr p13.11 Transcription factor p31.3 Seq+ 22331 ChimerSeq STARFusion TCGA_RNA-Seq TMEM9B-MGP TMEM9B chr11 8977737 - MGP chr12 15035981 - Exonic hg19 BRCA TCGA-BH-A0B1-01A 2 2 Out-of-frame Inter-chr p15.4 p12.3 Seq+ 22332 ChimerSeq STARFusion TCGA_RNA-Seq OLFM2-TBC1D21 OLFM2 chr19 10046980 - TBC1D21 chr15 74173985 + Exonic hg19 BRCA TCGA-AN-A0AR-01A 8 123 In-Frame Inter-chr p13.2 q24.1 Seq+ 22333 ChimerSeq STARFusion TCGA_RNA-Seq OLFM2-TBC1D21 OLFM2 chr19 10046980 - TBC1D21 chr15 74173740 + Exonic hg19 BRCA TCGA-AN-A0AR-01A 3 123 In-Frame Inter-chr p13.2 q24.1 Seq+ 22334 ChimerSeq STARFusion TCGA_RNA-Seq TFAP2A-MAK TFAP2A chr6 10404741 - MAK chr6 10764839 - Exonic hg19 BRCA TCGA-AN-A0AR-01A 7 19 Out-of-frame Intra-chr p24.3 Tumor suppressor gene Transcription factor p24.2 CMGC:RCK Seq+ 22335 ChimerSeq STARFusion TCGA_RNA-Seq ZNF79-SLC2A8 ZNF79 chr9 130191196 + SLC2A8 chr9 130165396 + Exonic hg19 BRCA TCGA-AN-A0AR-01A 3 17 Out-of-frame Intra-chr q33.3 Transcription factor q33.3 Seq+ 22336 ChimerSeq STARFusion TCGA_RNA-Seq ESCO1-KANK1 ESCO1 chr18 19180584 - KANK1 chr9 710804 + Exonic hg19 BRCA TCGA-AN-A0AR-01A 3 15 5'UTR-5'UTR Inter-chr q11.2 p24.3 Tumor suppressor gene Seq+ 22337 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0355-LSM14A KIAA0355 chr19 34745519 + LSM14A chr19 34706029 + Exonic hg19 BRCA TCGA-AN-A0AR-01A 5 4 5'UTR-CDS Intra-chr 22338 ChimerSeq STARFusion TCGA_RNA-Seq BAG2-ZNF451 BAG2 chr6 57037608 + ZNF451 chr6 57025882 + Exonic hg19 BRCA TCGA-AN-A0AR-01A 2 10 Out-of-frame Intra-chr p12.1 p12.1 Transcription factor Seq+ 22339 ChimerSeq STARFusion TCGA_RNA-Seq SESTD1-ZNF385B SESTD1 chr2 180129226 - ZNF385B chr2 180409696 - Exonic hg19 BRCA TCGA-AN-A0AR-01A 3 2 5'UTR-5'UTR Intra-chr q31.2 q31.3 Transcription factor Seq+ 22340 ChimerSeq STARFusion TCGA_RNA-Seq XYLB-ITGA9 XYLB chr3 38390123 + ITGA9 chr3 37695205 + Exonic hg19 BRCA TCGA-AN-A0AR-01A 3 2 Out-of-frame Intra-chr p22.2 p22.2 Oncogene Seq+ 22341 ChimerSeq STARFusion TCGA_RNA-Seq LOC642236-FRG1 LOC642236 chr9 68438559 - FRG1 chr4 190876194 + Exonic hg19 BRCA TCGA-AN-A0AR-01A 3 1 Out-of-frame Inter-chr 22342 ChimerSeq STARFusion TCGA_RNA-Seq LOC728377-ARHGEF5 LOC728377 chr7 143969538 - ARHGEF5 chr7 144075855 + Exonic hg19 BRCA TCGA-AN-A0AR-01A 2 1 3'UTR-CDS Intra-chr q35 22343 ChimerSeq STARFusion TCGA_RNA-Seq NFXL1-CNGA1 NFXL1 chr4 47915986 - CNGA1 chr4 47951912 - Exonic hg19 BRCA TCGA-AN-A0AR-01A 2 1 Out-of-frame Intra-chr p12 Transcription factor p12 22344 ChimerSeq STARFusion TCGA_RNA-Seq USP34-IGL@ USP34 chr2 61541802 - IGL@ chr22 23247171 + Exonic hg19 BRCA TCGA-BH-A0H5-01A 49 0 Out-of-frame Inter-chr p15 q11.22 22345 ChimerSeq STARFusion TCGA_RNA-Seq USP34-IGLC3 USP34 chr2 61541802 - IGLC3 chr22 23247171 + Exonic hg19 BRCA TCGA-BH-A0H5-01A 49 0 Out-of-frame Inter-chr p15 q11.22 22346 ChimerSeq STARFusion TCGA_RNA-Seq USP34-IGLJ3 USP34 chr2 61541802 - IGLJ3 chr22 23247171 + Exonic hg19 BRCA TCGA-BH-A0H5-01A 49 0 Out-of-frame Inter-chr p15 q11.22 22347 ChimerSeq STARFusion TCGA_RNA-Seq FAM101B-IGH@ FAM101B chr17 292155 - IGH@ chr14 106175001 - Exonic hg19 BRCA TCGA-BH-A0H5-01A 14 1 Out-of-frame Inter-chr 32.33 22348 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSD1 PRSS27 chr16 2763530 - TPSD1 chr16 1308333 + Exonic hg19 BRCA TCGA-BH-A0H5-01A 8 6 In-Frame Intra-chr p13.3 p13.3 22349 ChimerSeq STARFusion TCGA_RNA-Seq PAK1-KCTD14 PAK1 chr11 77090286 - KCTD14 chr11 77728316 - Exonic hg19 BRCA TCGA-AN-A03Y-01A 13 96 Out-of-frame Intra-chr q14.1 STE:STE20 q14.1 Seq+ 22350 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-MAP6 UVRAG chr11 75672593 + MAP6 chr11 75319367 - Exonic hg19 BRCA TCGA-AN-A03Y-01A 15 70 Out-of-frame Intra-chr q13.5 Tumor suppressor gene q13.5 Seq+ 22351 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT6-FNTA AGPAT6 chr8 41472567 + FNTA chr8 42940303 + Exonic hg19 BRCA TCGA-AN-A03Y-01A 5 78 In-Frame Intra-chr p11.21 Seq+ 22352 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-MAP6 UVRAG chr11 75623083 + MAP6 chr11 75319367 - Exonic hg19 BRCA TCGA-AN-A03Y-01A 5 70 In-Frame Intra-chr q13.5 Tumor suppressor gene q13.5 Seq+ 22353 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-MAP6 UVRAG chr11 75672593 + MAP6 chr11 75299229 - Exonic hg19 BRCA TCGA-AN-A03Y-01A 2 70 Out-of-frame Intra-chr q13.5 Tumor suppressor gene q13.5 Seq+ 22354 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB2-PAAF1 RPS6KB2 chr11 67196711 + PAAF1 chr11 73627590 + Exonic hg19 BRCA TCGA-AN-A03Y-01A 8 45 In-Frame Intra-chr q13.2 q13.4 Seq+ 22355 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80954857 - MRPS28 chr8 80831385 - Exonic hg19 BRCA TCGA-AN-A03Y-01A 6 25 Out-of-frame Intra-chr q21.13 q21.13 22356 ChimerSeq STARFusion TCGA_RNA-Seq C11orf30-MYO7A C11orf30 chr11 76250684 + MYO7A chr11 76858844 + Exonic hg19 BRCA TCGA-AN-A03Y-01A 3 17 Out-of-frame Intra-chr q13.5 22357 ChimerSeq STARFusion TCGA_RNA-Seq CLNS1A-GAB2 CLNS1A chr11 77330651 - GAB2 chr11 77938097 - Exonic hg19 BRCA TCGA-AN-A03Y-01A 2 3 3'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 22358 ChimerSeq STARFusion TCGA_RNA-Seq MBOAT1-HBS1L MBOAT1 chr6 20212367 - HBS1L chr6 135371785 - Exonic hg19 BRCA TCGA-E2-A155-01A 17 81 Out-of-frame Intra-chr p22.3 q23.3 Seq+ 22359 ChimerSeq STARFusion TCGA_RNA-Seq UIMC1-LOC643201 UIMC1 chr5 176370336 - LOC643201 chr5 175613383 - Exonic hg19 BRCA TCGA-E2-A155-01A 10 91 CDS-3'UTR Intra-chr q35.2 Tumor suppressor gene 22360 ChimerSeq STARFusion TCGA_RNA-Seq ATXN1-PTPRK ATXN1 chr6 16753464 - PTPRK chr6 128411137 - Exonic hg19 BRCA TCGA-E2-A155-01A 10 69 5'UTR-CDS Intra-chr p22.3 Tumor suppressor gene Seq+ 22361 ChimerSeq STARFusion TCGA_RNA-Seq UIMC1-LOC643201 UIMC1 chr5 176370336 - LOC643201 chr5 175614599 - Exonic hg19 BRCA TCGA-E2-A155-01A 2 91 CDS-3'UTR Intra-chr q35.2 Tumor suppressor gene 22362 ChimerSeq STARFusion TCGA_RNA-Seq CMTM8-RAF1 CMTM8 chr3 32280611 + RAF1 chr3 12660246 - Exonic hg19 BRCA TCGA-E2-A155-01A 9 9 CDS-5'UTR Intra-chr p22.3 p25.2 TKL:RAF Oncogene Seq+ 22363 ChimerSeq STARFusion TCGA_RNA-Seq ARRB1-ANKFN1 ARRB1 chr11 75062632 - ANKFN1 chr17 54262110 + Exonic hg19 BRCA TCGA-E2-A155-01A 5 17 Out-of-frame Inter-chr q13.4 q22 Seq+ 22364 ChimerSeq STARFusion TCGA_RNA-Seq ARRB1-ANKFN1 ARRB1 chr11 75062632 - ANKFN1 chr17 54305278 + Exonic hg19 BRCA TCGA-E2-A155-01A 5 17 Out-of-frame Inter-chr q13.4 q22 Seq+ 22365 ChimerSeq STARFusion TCGA_RNA-Seq CPB1-CLIP1 CPB1 chr3 148545863 + CLIP1 chr12 122825422 - Exonic hg19 BRCA TCGA-AO-A12H-01A 5 1 Out-of-frame Inter-chr q24 q24.31 22366 ChimerSeq STARFusion TCGA_RNA-Seq TPPP-BRD9 TPPP chr5 693393 - BRD9 chr5 880004 - Exonic hg19 BRCA TCGA-AO-A12H-01A 2 2 5'UTR-CDS Intra-chr p15.33 p15.33 22367 ChimerSeq STARFusion TCGA_RNA-Seq ITGB6-RBMS1 ITGB6 chr2 161030485 - RBMS1 chr2 161159998 - Exonic hg19 BRCA TCGA-D8-A1XK-01A 78 310 In-Frame Intra-chr q24.2 q24.2 Seq+ 22368 ChimerSeq STARFusion TCGA_RNA-Seq ITGB6-RBMS1 ITGB6 chr2 161051880 - RBMS1 chr2 161288988 - Exonic hg19 BRCA TCGA-D8-A1XK-01A 19 236 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 22369 ChimerSeq STARFusion TCGA_RNA-Seq ITGB6-RBMS1 ITGB6 chr2 161051880 - RBMS1 chr2 161223902 - Exonic hg19 BRCA TCGA-D8-A1XK-01A 10 236 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 22370 ChimerSeq STARFusion TCGA_RNA-Seq TANC1-PKP4 TANC1 chr2 159954346 + PKP4 chr2 159459582 + Exonic hg19 BRCA TCGA-D8-A1XK-01A 24 75 Out-of-frame Intra-chr q24.2 q24.1 Seq+ 22371 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN14-SFTPD TSPAN14 chr10 82228443 + SFTPD chr10 81702635 - Exonic hg19 BRCA TCGA-D8-A1XK-01A 12 55 5'UTR-CDS Intra-chr q23.1 q22.3 Seq+ 22372 ChimerSeq STARFusion TCGA_RNA-Seq UBASH3B-FOLH1B UBASH3B chr11 122526918 + FOLH1B chr11 89413777 + Exonic hg19 BRCA TCGA-D8-A1XK-01A 12 34 Out-of-frame Intra-chr q24.1 q14.3 Seq+ 22373 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN14-SFTPD TSPAN14 chr10 82214127 + SFTPD chr10 81702635 - Exonic hg19 BRCA TCGA-D8-A1XK-01A 2 54 5'UTR-CDS Intra-chr q23.1 q22.3 Seq+ 22374 ChimerSeq STARFusion TCGA_RNA-Seq ELL2-TTC37 ELL2 chr5 95255128 - TTC37 chr5 94834295 - Exonic hg19 BRCA TCGA-D8-A1XK-01A 3 26 In-Frame Intra-chr q15 q15 Seq+ 22375 ChimerSeq STARFusion TCGA_RNA-Seq GCOM1-LPHN1 GCOM1 chr15 57896553 + LPHN1 chr19 14263249 - Exonic hg19 BRCA TCGA-D8-A1XK-01A 5 16 Out-of-frame Inter-chr q21.3 22376 ChimerSeq STARFusion TCGA_RNA-Seq MYZAP-LPHN1 MYZAP chr15 57896553 + LPHN1 chr19 14263249 - Exonic hg19 BRCA TCGA-D8-A1XK-01A 5 16 Out-of-frame Inter-chr q21.3 22377 ChimerSeq STARFusion TCGA_RNA-Seq POLR2M-LPHN1 POLR2M chr15 57896553 + LPHN1 chr19 14263249 - Exonic hg19 BRCA TCGA-D8-A1XK-01A 5 16 5'UTR-CDS Inter-chr q21.3 22378 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB48-TAS1R1 ZBTB48 chr1 6649110 + TAS1R1 chr1 6637010 + Exonic hg19 BRCA TCGA-D8-A1XK-01A 3 21 Out-of-frame Intra-chr p36.31 Tumor suppressor gene Transcription factor p36.31 Seq+ 22379 ChimerSeq STARFusion TCGA_RNA-Seq PUM2-IST1 PUM2 chr2 20550358 - IST1 chr16 71949529 + Exonic hg19 BRCA TCGA-D8-A1XK-01A 4 15 5'UTR-5'UTR Inter-chr p24.1 q22.2 Seq+ 22380 ChimerSeq STARFusion TCGA_RNA-Seq SOD2-GNAS SOD2 chr6 160113693 - GNAS chr20 57470667 + Exonic hg19 BRCA TCGA-D8-A1XK-01A 2 11 In-Frame Inter-chr q25.3 Tumor suppressor gene q13.32 Oncogene 22381 ChimerSeq STARFusion TCGA_RNA-Seq CBX3-GARS CBX3 chr7 26241446 + GARS chr7 30665850 + Exonic hg19 BRCA TCGA-A2-A0CW-01A 292 667 5'UTR-CDS Intra-chr p15.2 p14.3 Seq+ 22382 ChimerSeq STARFusion TCGA_RNA-Seq THRB-LMCD1 THRB chr3 24184992 - LMCD1 chr3 8574423 + Exonic hg19 BRCA TCGA-A2-A0CW-01A 11 33 In-Frame Intra-chr p24.2 Tumor suppressor gene Transcription factor p25.3 Seq+ 22383 ChimerSeq STARFusion TCGA_RNA-Seq KCNN3-DCST2 KCNN3 chr1 154794565 - DCST2 chr1 154999191 - Exonic hg19 BRCA TCGA-A2-A0CW-01A 7 19 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 22384 ChimerSeq STARFusion TCGA_RNA-Seq CAB39L-EXOSC8 CAB39L chr13 49918315 - EXOSC8 chr13 37576625 + Exonic hg19 BRCA TCGA-A2-A0CW-01A 7 4 In-Frame Intra-chr q14.2 q13.3 Seq+ 22385 ChimerSeq STARFusion TCGA_RNA-Seq SLC37A1-NT5C3 SLC37A1 chr21 43974252 + NT5C3 chr7 33057213 - Exonic hg19 BRCA TCGA-A2-A0CW-01A 2 19 Out-of-frame Inter-chr q22.3 Seq+ 22386 ChimerSeq STARFusion TCGA_RNA-Seq DPM3-KCNN3 DPM3 chr1 155112967 - KCNN3 chr1 154794660 - Exonic hg19 BRCA TCGA-A2-A0CW-01A 6 2 5'UTR-CDS Intra-chr q22 q21.3 Seq+ 22387 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF5-NPY RAPGEF5 chr7 22165222 - NPY chr7 24329118 + Exonic hg19 BRCA TCGA-A2-A0CW-01A 3 7 Out-of-frame Intra-chr p15.3 p15.3 Seq+ 22388 ChimerSeq STARFusion TCGA_RNA-Seq DYRK1A-BRWD1 DYRK1A chr21 38792686 + BRWD1 chr21 40574471 - Exonic hg19 BRCA TCGA-A2-A0CW-01A 2 10 Out-of-frame Intra-chr q22.13 CMGC:DYRK q22.2 Seq+ 22389 ChimerSeq STARFusion TCGA_RNA-Seq PAK4-CYP2A6 PAK4 chr19 39616559 + CYP2A6 chr19 41354668 - Exonic hg19 BRCA TCGA-A2-A0CW-01A 3 5 5'UTR-CDS Intra-chr q13.2 STE:STE20 q13.2 Seq+ 22390 ChimerSeq STARFusion TCGA_RNA-Seq STARD10-HOMER3 STARD10 chr11 72492103 - HOMER3 chr19 19040294 - Exonic hg19 BRCA TCGA-A2-A0CW-01A 3 0 Out-of-frame Inter-chr q13.4 p13.11 22391 ChimerSeq STARFusion TCGA_RNA-Seq HIVEP3-NUP153 HIVEP3 chr1 42501478 - NUP153 chr6 17616926 - Exonic hg19 BRCA TCGA-A2-A0CW-01A 2 0 3'UTR-CDS Inter-chr p34.2 Tumor suppressor gene Transcription factor p22.3 Seq+ 22392 ChimerSeq STARFusion TCGA_RNA-Seq ITPKC-DOPEY2 ITPKC chr19 41243674 + DOPEY2 chr21 37642311 + Exonic hg19 BRCA TCGA-A2-A0CW-01A 2 0 In-Frame Inter-chr q13.2 q22.12 22393 ChimerSeq STARFusion TCGA_RNA-Seq RPF2-IBTK RPF2 chr6 111337059 + IBTK chr6 82924546 - Exonic hg19 BRCA TCGA-A2-A0CW-01A 2 0 In-Frame Intra-chr q21 22394 ChimerSeq STARFusion TCGA_RNA-Seq STAU1-EYA2 STAU1 chr20 47734870 - EYA2 chr20 45700824 + Exonic hg19 BRCA TCGA-A2-A0CW-01A 2 0 In-Frame Intra-chr q13.13 q13.12 22395 ChimerSeq STARFusion TCGA_RNA-Seq TRIO-DROSHA TRIO chr5 14420130 + DROSHA chr5 31451747 - Exonic hg19 BRCA TCGA-A2-A0CW-01A 2 0 Out-of-frame Intra-chr p15.2 p13.3 22396 ChimerSeq STARFusion TCGA_RNA-Seq CLASRP-CALR CLASRP chr19 45563700 + CALR chr19 13054559 + Exonic hg19 BRCA TCGA-E2-A154-01A 3 0 Out-of-frame Intra-chr q13.32 p13.13 22397 ChimerSeq STARFusion TCGA_RNA-Seq SMARCAD1-PDLIM5 SMARCAD1 chr4 95147447 + PDLIM5 chr4 95494502 + Exonic hg19 BRCA TCGA-E2-A154-01A 3 0 In-Frame Intra-chr q22.3 q22.3 22398 ChimerSeq STARFusion TCGA_RNA-Seq HPS1-SHARPIN HPS1 chr10 100202881 - SHARPIN chr8 145158128 - Exonic hg19 BRCA TCGA-E2-A154-01A 2 1 In-Frame Inter-chr q24.2 q24.3 22399 ChimerSeq STARFusion TCGA_RNA-Seq CCS-ARFGAP1 CCS chr11 66361185 + ARFGAP1 chr20 61917006 + Exonic hg19 BRCA TCGA-E2-A154-01A 2 0 Out-of-frame Inter-chr q13.2 q13.33 22400 ChimerSeq STARFusion TCGA_RNA-Seq ZC3HC1-RSF1 ZC3HC1 chr7 129691061 - RSF1 chr11 77475734 - Exonic hg19 BRCA TCGA-E2-A154-01A 2 0 Out-of-frame Inter-chr q32.2 q14.1 22401 ChimerSeq STARFusion TCGA_RNA-Seq ETFB-LIM2 ETFB chr19 51857404 - LIM2 chr19 51883893 - Exonic hg19 BRCA TCGA-B6-A0RT-01A 23 110 Out-of-frame Intra-chr q13.41 q13.41 Seq+ 22402 ChimerSeq STARFusion TCGA_RNA-Seq PPP1CB-BRE PPP1CB chr2 28975042 + BRE chr2 28152699 + Exonic hg19 BRCA TCGA-B6-A0RT-01A 18 72 Out-of-frame Intra-chr p23.2 Seq+ 22403 ChimerSeq STARFusion TCGA_RNA-Seq SCAI-PPP6C SCAI chr9 127904912 - PPP6C chr9 127912200 - Exonic hg19 BRCA TCGA-B6-A0RT-01A 7 27 Out-of-frame Intra-chr q33.3 q33.3 Seq+ 22404 ChimerSeq STARFusion TCGA_RNA-Seq PREP-PLN PREP chr6 105845728 - PLN chr6 118879988 + Exonic hg19 BRCA TCGA-B6-A0RT-01A 7 26 CDS-5'UTR Intra-chr q21 q22.31 Seq+ 22405 ChimerSeq STARFusion TCGA_RNA-Seq PITPNA-NXN PITPNA chr17 1444860 - NXN chr17 729318 - Exonic hg19 BRCA TCGA-B6-A0RT-01A 6 19 In-Frame Intra-chr p13.3 p13.3 Seq+ 22406 ChimerSeq STARFusion TCGA_RNA-Seq SLTM-UACA SLTM chr15 59209134 - UACA chr15 70991999 - Exonic hg19 BRCA TCGA-B6-A0RT-01A 2 28 In-Frame Intra-chr q22.1 q23 Seq+ 22407 ChimerSeq STARFusion TCGA_RNA-Seq SLTM-UACA SLTM chr15 59204762 - UACA chr15 70991999 - Exonic hg19 BRCA TCGA-B6-A0RT-01A 2 28 In-Frame Intra-chr q22.1 q23 Seq+ 22408 ChimerSeq STARFusion TCGA_RNA-Seq TEAD1-CAP2 TEAD1 chr11 12697108 + CAP2 chr6 17463227 + Exonic hg19 BRCA TCGA-B6-A0RT-01A 3 24 5'UTR-CDS Inter-chr p15.3 Transcription factor p22.3 Seq+ 22409 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-LITAF ZC3H7A chr16 11875281 - LITAF chr16 11650591 - Exonic hg19 BRCA TCGA-B6-A0RT-01A 5 12 CDS-5'UTR Intra-chr p13.13 p13.13 Tumor suppressor gene Seq+ 22410 ChimerSeq STARFusion TCGA_RNA-Seq NEK9-TMED10 NEK9 chr14 75593406 - TMED10 chr14 75602589 - Exonic hg19 BRCA TCGA-B6-A0RT-01A 3 18 In-Frame Intra-chr q24.3 Other:NEK q24.3 Seq+ 22411 ChimerSeq STARFusion TCGA_RNA-Seq KLC1-APOPT1 KLC1 chr14 104095831 + APOPT1 chr14 104056518 + Exonic hg19 BRCA TCGA-B6-A0RT-01A 5 7 5'UTR-CDS Intra-chr q32.33 q32.33 Seq+ 22412 ChimerSeq STARFusion TCGA_RNA-Seq SCCPDH-CNST SCCPDH chr1 246890306 + CNST chr1 246823501 + Exonic hg19 BRCA TCGA-B6-A0RT-01A 4 11 In-Frame Intra-chr q44 q44 Seq+ 22413 ChimerSeq STARFusion TCGA_RNA-Seq GOLGA3-POLE GOLGA3 chr12 133398582 - POLE chr12 133257865 - Exonic hg19 BRCA TCGA-B6-A0RT-01A 3 5 Out-of-frame Intra-chr q24.33 q24.33 22414 ChimerSeq STARFusion TCGA_RNA-Seq IARS-NOL8 IARS chr9 95048004 - NOL8 chr9 95073541 - Exonic hg19 BRCA TCGA-B6-A0RT-01A 2 4 In-Frame Intra-chr q22.31 q22.31 Seq+ 22415 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHM2-CENPI PLEKHM2 chr1 16011113 + CENPI chrX 100395655 + Exonic hg19 BRCA TCGA-B6-A0RT-01A 2 2 In-Frame Inter-chr p36.21 q22.1 22416 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-ICA1 RCC1 chr1 28834672 + ICA1 chr7 8183602 - Exonic hg19 BRCA TCGA-B6-A0RT-01A 2 1 5'UTR-CDS Inter-chr p35.3 p21.3 Seq+ 22417 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-ICA1 SNHG3 chr1 28834672 + ICA1 chr7 8183602 - Exonic hg19 BRCA TCGA-B6-A0RT-01A 2 1 5'UTR-CDS Inter-chr p35.3 p21.3 22418 ChimerSeq STARFusion TCGA_RNA-Seq MTL5-CPT1A MTL5 chr11 68514676 - CPT1A chr11 68529155 - Exonic hg19 BRCA TCGA-B6-A0RU-01A 28 42 In-Frame Intra-chr q13.3 22419 ChimerSeq STARFusion TCGA_RNA-Seq GBA-SCAMP3 GBA chr1 155214019 - SCAMP3 chr1 155230375 - Exonic hg19 BRCA TCGA-B6-A0RU-01A 7 93 Out-of-frame Intra-chr Seq+ 22420 ChimerSeq STARFusion TCGA_RNA-Seq GBA-SCAMP3 GBA chr1 155214297 - SCAMP3 chr1 155230381 - Exonic hg19 BRCA TCGA-B6-A0RU-01A 7 91 5'UTR-CDS Intra-chr Seq+ 22421 ChimerSeq STARFusion TCGA_RNA-Seq GBA-SCAMP3 GBA chr1 155214297 - SCAMP3 chr1 155228745 - Exonic hg19 BRCA TCGA-B6-A0RU-01A 7 91 5'UTR-CDS Intra-chr Seq+ 22422 ChimerSeq STARFusion TCGA_RNA-Seq GBA-SCAMP3 GBA chr1 155214297 - SCAMP3 chr1 155230241 - Exonic hg19 BRCA TCGA-B6-A0RU-01A 5 91 5'UTR-CDS Intra-chr Seq+ 22423 ChimerSeq STARFusion TCGA_RNA-Seq CHD9-RAD51B CHD9 chr16 53191453 + RAD51B chr14 68758601 + Exonic hg19 BRCA TCGA-B6-A0RU-01A 2 8 In-Frame Inter-chr q12.2 q24.1 Seq+ 22424 ChimerSeq STARFusion TCGA_RNA-Seq PRKRIR-ANO1 PRKRIR chr11 76091792 - ANO1 chr11 70016993 + Exonic hg19 BRCA TCGA-5T-A9QA-01A 16 67 Out-of-frame Intra-chr q13.3 Seq+ 22425 ChimerSeq STARFusion TCGA_RNA-Seq SMG1-ARL6IP1 SMG1 chr16 18937272 - ARL6IP1 chr16 18806903 - Exonic hg19 BRCA TCGA-A2-A0CM-01A 37 42 In-Frame Intra-chr p12.3 Atypical:PIKK p12.3 22426 ChimerSeq STARFusion TCGA_RNA-Seq UBE3C-DNAJB6 UBE3C chr7 156956557 + DNAJB6 chr7 157155855 + Exonic hg19 BRCA TCGA-A2-A0CM-01A 10 73 Out-of-frame Intra-chr q36.3 q36.3 Seq+ 22427 ChimerSeq STARFusion TCGA_RNA-Seq FXR1-VGLL4 FXR1 chr3 180630524 + VGLL4 chr3 11606493 - Exonic hg19 BRCA TCGA-A2-A0CM-01A 10 8 Out-of-frame Intra-chr q26.33 p25.2 Seq+ 22428 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-DIP2A IGH@ chr14 106552288 - DIP2A chr21 47969815 + Exonic hg19 BRCA TCGA-A2-A0CM-01A 7 2 Out-of-frame Inter-chr 32.33 q22.3 22429 ChimerSeq STARFusion TCGA_RNA-Seq VGLL4-FXR1 VGLL4 chr3 11744445 - FXR1 chr3 180651122 + Exonic hg19 BRCA TCGA-A2-A0CM-01A 3 17 Out-of-frame Intra-chr p25.2 q26.33 Seq+ 22430 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R3A-PCCB PPP2R3A chr3 135684691 + PCCB chr3 135974698 + Exonic hg19 BRCA TCGA-A2-A0CM-01A 3 10 5'UTR-CDS Intra-chr q22.2 q22.3 Seq+ 22431 ChimerSeq STARFusion TCGA_RNA-Seq SMG1-RPS15A SMG1 chr16 18937272 - RPS15A chr16 18800440 - Exonic hg19 BRCA TCGA-A2-A0CM-01A 4 3 CDS-5'UTR Intra-chr p12.3 Atypical:PIKK p12.3 Seq+ 22432 ChimerSeq STARFusion TCGA_RNA-Seq RAB2A-LINC00964 RAB2A chr8 61504528 + LINC00964 chr8 125953705 + Exonic hg19 BRCA TCGA-A2-A0CM-01A 2 10 Out-of-frame Intra-chr q12.1 q24.13 22433 ChimerSeq STARFusion TCGA_RNA-Seq SRD5A1-PAPD7 SRD5A1 chr5 6633982 + PAPD7 chr5 6738796 + Exonic hg19 BRCA TCGA-A2-A0CM-01A 2 8 3'UTR-CDS Intra-chr p15.31 p15.31 22434 ChimerSeq STARFusion TCGA_RNA-Seq FGFR1-CSMD1 FGFR1 chr8 38314874 - CSMD1 chr8 3889621 - Exonic hg19 BRCA TCGA-BH-A1ES-01A 3 8 In-Frame Intra-chr p11.23 TK:FGFR Oncogene p23.2 Tumor suppressor gene Seq+ 22435 ChimerSeq STARFusion TCGA_RNA-Seq UNK-ICAM2 UNK chr17 73781065 + ICAM2 chr17 62084095 - Exonic hg19 BRCA TCGA-BH-A1ES-01A 3 3 5'UTR-5'UTR Intra-chr q25.1 q23.3 Seq+ 22436 ChimerSeq STARFusion TCGA_RNA-Seq KAT6A-ADAM2 KAT6A chr8 41905896 - ADAM2 chr8 39627094 - Exonic hg19 BRCA TCGA-E2-A15A-06A 26 122 Out-of-frame Intra-chr p11.21 Oncogene Seq+ 22437 ChimerSeq STARFusion TCGA_RNA-Seq KAT6A-ADAM2 KAT6A chr8 41905896 - ADAM2 chr8 39624770 - Exonic hg19 BRCA TCGA-E2-A15A-06A 18 122 In-Frame Intra-chr p11.21 Oncogene Seq+ 22438 ChimerSeq STARFusion TCGA_RNA-Seq KAT6A-ADAM2 KAT6A chr8 41905896 - ADAM2 chr8 39646259 - Exonic hg19 BRCA TCGA-E2-A15A-06A 4 122 In-Frame Intra-chr p11.21 Oncogene Seq+ 22439 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-FGFR1 WHSC1L1 chr8 38239317 - FGFR1 chr8 38315052 - Exonic hg19 BRCA TCGA-E2-A15A-06A 11 37 5'UTR-5'UTR Intra-chr p11.23 Tumor suppressor gene p11.23 TK:FGFR Oncogene Seq+ 22440 ChimerSeq STARFusion TCGA_RNA-Seq ASH2L-MGME1 ASH2L chr8 37971805 + MGME1 chr20 17968809 + Exonic hg19 BRCA TCGA-E2-A15A-06A 6 40 Out-of-frame Inter-chr p11.23 p11.23 Seq+ 22441 ChimerSeq STARFusion TCGA_RNA-Seq ZNF143-IPO7 ZNF143 chr11 9492967 + IPO7 chr11 9462002 + Exonic hg19 BRCA TCGA-E2-A15A-06A 4 48 In-Frame Intra-chr p15.4 Transcription factor p15.4 Seq+ 22442 ChimerSeq STARFusion TCGA_RNA-Seq ASH2L-MGME1 ASH2L chr8 37968351 + MGME1 chr20 17970582 + Exonic hg19 BRCA TCGA-E2-A15A-06A 3 40 Out-of-frame Inter-chr p11.23 p11.23 Seq+ 22443 ChimerSeq STARFusion TCGA_RNA-Seq ASH2L-MGME1 ASH2L chr8 37971805 + MGME1 chr20 17970582 + Exonic hg19 BRCA TCGA-E2-A15A-06A 2 40 Out-of-frame Inter-chr p11.23 p11.23 Seq+ 22444 ChimerSeq STARFusion TCGA_RNA-Seq TXNDC11-ZC3H7A TXNDC11 chr16 11836333 - ZC3H7A chr16 11850226 - Exonic hg19 BRCA TCGA-E2-A15A-06A 4 21 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 22445 ChimerSeq STARFusion TCGA_RNA-Seq GALNT11-FKBP3 GALNT11 chr7 151722969 + FKBP3 chr14 45600003 - Exonic hg19 BRCA TCGA-E2-A15A-06A 3 19 5'UTR-CDS Inter-chr q36.1 q21.2 Seq+ 22446 ChimerSeq STARFusion TCGA_RNA-Seq DGKH-MED13L DGKH chr13 42795530 + MED13L chr12 116460406 - Exonic hg19 BRCA TCGA-E2-A15A-06A 4 11 Out-of-frame Inter-chr q14.11 q24.21 Seq+ 22447 ChimerSeq STARFusion TCGA_RNA-Seq PPFIBP1-PDILT PPFIBP1 chr12 27731172 + PDILT chr16 20381011 - Exonic hg19 BRCA TCGA-E2-A15A-06A 3 10 5'UTR-CDS Inter-chr p11.23 p12.3 Seq+ 22448 ChimerSeq STARFusion TCGA_RNA-Seq MED13L-DGKH MED13L chr12 116440808 - DGKH chr13 42783095 + Exonic hg19 BRCA TCGA-E2-A15A-06A 3 6 Out-of-frame Inter-chr q24.21 q14.11 Seq+ 22449 ChimerSeq STARFusion TCGA_RNA-Seq CCND3-GUCA1B CCND3 chr6 42016239 - GUCA1B chr6 42156469 - Exonic hg19 BRCA TCGA-AR-A1AI-01A 22 39 5'UTR-CDS Intra-chr p21.1 p21.1 Seq+ 22450 ChimerSeq STARFusion TCGA_RNA-Seq PLXND1-TMCC1 PLXND1 chr3 129324172 - TMCC1 chr3 129390107 - Exonic hg19 BRCA TCGA-AR-A1AI-01A 14 32 In-Frame Intra-chr q22.1 q22.1 KB Seq+ 22451 ChimerSeq STARFusion TCGA_RNA-Seq PAPSS2-LIPJ PAPSS2 chr10 89419765 + LIPJ chr10 90362333 + Exonic hg19 BRCA TCGA-AR-A1AI-01A 8 46 In-Frame Intra-chr q23.2 q23.31 Seq+ 22452 ChimerSeq STARFusion TCGA_RNA-Seq PAPSS2-LIPJ PAPSS2 chr10 89419765 + LIPJ chr10 90347023 + Exonic hg19 BRCA TCGA-AR-A1AI-01A 6 46 CDS-5'UTR Intra-chr q23.2 q23.31 Seq+ 22453 ChimerSeq STARFusion TCGA_RNA-Seq ARID1A-NUDC ARID1A chr1 27088810 + NUDC chr1 27250580 + Exonic hg19 BRCA TCGA-AR-A1AI-01A 7 24 Out-of-frame Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 Seq+ 22454 ChimerSeq STARFusion TCGA_RNA-Seq PTPRF-ST3GAL3 PTPRF chr1 44035449 + ST3GAL3 chr1 44201904 + Exonic hg19 BRCA TCGA-AR-A1AI-01A 5 17 CDS-5'UTR Intra-chr p34.2 p34.1 Seq+ 22455 ChimerSeq STARFusion TCGA_RNA-Seq ARID1A-NUDC ARID1A chr1 27059283 + NUDC chr1 27250580 + Exonic hg19 BRCA TCGA-AR-A1AI-01A 2 24 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 Seq+ 22456 ChimerSeq STARFusion TCGA_RNA-Seq TNPO3-RCAN1 TNPO3 chr7 128614922 - RCAN1 chr21 35896008 - Exonic hg19 BRCA TCGA-AR-A1AI-01A 3 6 Out-of-frame Inter-chr q32.1 q22.12 Seq+ 22457 ChimerSeq STARFusion TCGA_RNA-Seq ANKFY1-ZZEF1 ANKFY1 chr17 4167227 - ZZEF1 chr17 3970536 - Exonic hg19 BRCA TCGA-AR-A1AI-01A 4 1 In-Frame Intra-chr p13.2 p13.2 Seq+ 22458 ChimerSeq STARFusion TCGA_RNA-Seq DNMT1-ZGLP1 DNMT1 chr19 10266529 - ZGLP1 chr19 10416628 - Exonic hg19 BRCA TCGA-AR-A1AI-01A 2 6 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene Transcription factor p13.2 Transcription factor 22459 ChimerSeq STARFusion TCGA_RNA-Seq NMUR1-PDE6D NMUR1 chr2 232395070 - PDE6D chr2 232603912 - Exonic hg19 BRCA TCGA-AR-A1AI-01A 3 2 Out-of-frame Intra-chr q37.1 q37.1 Seq+ 22460 ChimerSeq STARFusion TCGA_RNA-Seq TAX1BP1-CCDC91 TAX1BP1 chr7 27809453 + CCDC91 chr12 28636985 + Exonic hg19 BRCA TCGA-AR-A1AI-01A 2 0 In-Frame Inter-chr p15.2 p11.22 22461 ChimerSeq STARFusion TCGA_RNA-Seq USP32-ELOF1 USP32 chr17 58282808 - ELOF1 chr19 11665180 - Exonic hg19 BRCA TCGA-EW-A1J1-01A 67 312 CDS-5'UTR Inter-chr q23.2 p13.2 Seq+ 22462 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-OTOP3 CLTC chr17 57761117 + OTOP3 chr17 72942756 + Exonic hg19 BRCA TCGA-EW-A1J1-01A 20 62 Out-of-frame Intra-chr q23.1 q25.1 Seq+ 22463 ChimerSeq STARFusion TCGA_RNA-Seq SETD5-LMCD1 SETD5 chr3 9483929 + LMCD1 chr3 8574423 + Exonic hg19 BRCA TCGA-LL-A8F5-01A 4 16 In-Frame Intra-chr p25.3 p25.3 Seq+ 22464 ChimerSeq STARFusion TCGA_RNA-Seq ITGA9-C3orf35 ITGA9 chr3 37514951 + C3orf35 chr3 37458045 + Exonic hg19 BRCA TCGA-LL-A8F5-01A 4 3 CDS-5'UTR Intra-chr p22.2 Oncogene p22.2 22465 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80954854 - MRPS28 chr8 80831382 - Exonic hg19 BRCA TCGA-LL-A8F5-01A 3 4 Out-of-frame Intra-chr q21.13 q21.13 22466 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF3-ASCC2 ZNRF3 chr22 29280054 + ASCC2 chr22 30221246 - Exonic hg19 BRCA TCGA-A8-A094-01A 41 213 In-Frame Intra-chr q12.1 q12.2 Seq+ 22467 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF3-ASCC2 ZNRF3 chr22 29280054 + ASCC2 chr22 30221769 - Exonic hg19 BRCA TCGA-A8-A094-01A 16 213 In-Frame Intra-chr q12.1 q12.2 Seq+ 22468 ChimerSeq STARFusion TCGA_RNA-Seq TLK1-SSB TLK1 chr2 171939291 - SSB chr2 170661984 + Exonic hg19 BRCA TCGA-A8-A094-01A 16 53 In-Frame Intra-chr q31.1 Other:TLK q31.1 Seq+ 22469 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1598-EMX2OS KIAA1598 chr10 118764533 - EMX2OS chr10 119251620 - Exonic hg19 BRCA TCGA-A8-A094-01A 6 43 CDS-3'UTR Intra-chr q26.11 22470 ChimerSeq STARFusion TCGA_RNA-Seq SEC16A-QSOX2 SEC16A chr9 139353586 - QSOX2 chr9 139103298 - Exonic hg19 BRCA TCGA-A8-A094-01A 5 20 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 22471 ChimerSeq STARFusion TCGA_RNA-Seq ZNF544-SENP6 ZNF544 chr19 58741828 + SENP6 chr6 76385576 + Exonic hg19 BRCA TCGA-A8-A094-01A 3 15 5'UTR-CDS Inter-chr q13.43 Transcription factor q14.1 Seq+ 22472 ChimerSeq STARFusion TCGA_RNA-Seq ZFYVE26-RAD51B ZFYVE26 chr14 68283251 - RAD51B chr14 68878141 + Exonic hg19 BRCA TCGA-A8-A094-01A 4 5 5'UTR-CDS Intra-chr q24.1 q24.1 Seq+ 22473 ChimerSeq STARFusion TCGA_RNA-Seq LOC284757-FAM83D LOC284757 chr20 58755971 + FAM83D chr20 37580182 + Exonic hg19 BRCA TCGA-A8-A094-01A 2 2 5'UTR-CDS Intra-chr q11.23 22474 ChimerSeq STARFusion TCGA_RNA-Seq ZNF841-GNAS ZNF841 chr19 52598828 - GNAS chr20 57470667 + Exonic hg19 BRCA TCGA-A8-A094-01A 2 1 5'UTR-5'UTR Inter-chr q13.41 Transcription factor q13.32 Oncogene 22475 ChimerSeq STARFusion TCGA_RNA-Seq PICALM-SYTL2 PICALM chr11 85718585 - SYTL2 chr11 85469157 - Exonic hg19 BRCA TCGA-A8-A094-01A 2 0 CDS-5'UTR Intra-chr q14.2 q14.1 22476 ChimerSeq STARFusion TCGA_RNA-Seq FGF12-SYN3 FGF12 chr3 192053150 - SYN3 chr22 32992722 - Exonic hg19 BRCA TCGA-AR-A0TP-01A 7 11 In-Frame Inter-chr q29 q12.3 Seq+ 22477 ChimerSeq STARFusion TCGA_RNA-Seq NUDT3-C6orf106 NUDT3 chr6 34309639 - C6orf106 chr6 34622556 - Exonic hg19 BRCA TCGA-AR-A0TP-01A 3 24 Out-of-frame Intra-chr p21.31 p21.31 22478 ChimerSeq STARFusion TCGA_RNA-Seq AIM1-ARMC2 AIM1 chr6 106992572 + ARMC2 chr6 109294560 + Exonic hg19 BRCA TCGA-AR-A0TP-01A 4 19 Out-of-frame Intra-chr q21 Seq+ 22479 ChimerSeq STARFusion TCGA_RNA-Seq AIM1-ARMC2 AIM1 chr6 106992808 + ARMC2 chr6 109294560 + Exonic hg19 BRCA TCGA-AR-A0TP-01A 2 19 Out-of-frame Intra-chr q21 Seq+ 22480 ChimerSeq STARFusion TCGA_RNA-Seq JAK1-ZC3H7B JAK1 chr1 65312332 - ZC3H7B chr22 41739419 + Exonic hg19 BRCA TCGA-AR-A0TP-01A 2 9 In-Frame Inter-chr p31.3 TK:JakA Oncogene q13.2 Seq+ 22481 ChimerSeq STARFusion TCGA_RNA-Seq SPAG7-CAMTA2 SPAG7 chr17 4871015 - CAMTA2 chr17 4886338 - Exonic hg19 BRCA TCGA-AR-A0TP-01A 2 3 Out-of-frame Intra-chr p13.2 p13.2 Transcription factor Seq+ 22482 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 BRCA TCGA-AR-A0TP-01A 2 2 CDS-5'UTR Intra-chr q23 Seq+ 22483 ChimerSeq STARFusion TCGA_RNA-Seq OPHN1-PDZD11 OPHN1 chrX 67652709 - PDZD11 chrX 69509204 - Exonic hg19 BRCA TCGA-AR-A0TP-01A 2 0 CDS-5'UTR Intra-chr q12 q13.1 22484 ChimerSeq STARFusion TCGA_RNA-Seq GPATCH8-NPLOC4 GPATCH8 chr17 42512433 - NPLOC4 chr17 79596831 - Exonic hg19 BRCA TCGA-A8-A07B-01A 3 37 In-Frame Intra-chr q21.31 q25.3 Seq+ 22485 ChimerSeq STARFusion TCGA_RNA-Seq CDC27-ST7L CDC27 chr17 45266512 - ST7L chr1 113143470 - Exonic hg19 BRCA TCGA-A1-A0SH-01A 2 46 Out-of-frame Inter-chr q21.32 p13.2 Seq+ 22486 ChimerSeq STARFusion TCGA_RNA-Seq CNN3-ALG14 CNN3 chr1 95392394 - ALG14 chr1 95492816 - Exonic hg19 BRCA TCGA-A1-A0SH-01A 4 7 In-Frame Intra-chr p21.3 p21.3 Seq+ 22487 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0040-LOC340073 KIAA0040 chr1 175161996 - LOC340073 chr5 134583502 - Exonic hg19 BRCA TCGA-A1-A0SH-01A 2 7 5'UTR-3'UTR Inter-chr q25.1 22488 ChimerSeq STARFusion TCGA_RNA-Seq RDH13-QDPR RDH13 chr19 55575664 - QDPR chr4 17488859 - Exonic hg19 BRCA TCGA-A1-A0SH-01A 2 0 5'UTR-CDS Inter-chr p15.32 22489 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-ARSG SEPT9 chr17 75303279 + ARSG chr17 66339745 + Exonic hg19 BRCA TCGA-BH-A1ES-06A 7 90 Out-of-frame Intra-chr q24.2 Seq+ 22490 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-ARSG SEPT9 chr17 75316430 + ARSG chr17 66339745 + Exonic hg19 BRCA TCGA-BH-A1ES-06A 2 90 Out-of-frame Intra-chr q24.2 Seq+ 22491 ChimerSeq STARFusion TCGA_RNA-Seq STAM-PTPLA STAM chr10 17702547 + PTPLA chr10 17646046 - Exonic hg19 BRCA TCGA-BH-A1ES-06A 3 37 In-Frame Intra-chr p12.33 Seq+ 22492 ChimerSeq STARFusion TCGA_RNA-Seq CHN2-PRR15 CHN2 chr7 29440444 + PRR15 chr7 29605801 + Exonic hg19 BRCA TCGA-BH-A1ES-06A 4 26 CDS-5'UTR Intra-chr p14.3 p14.3 Seq+ 22493 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT2A MT1L chr16 56652570 + MT2A chr16 56643206 + Exonic hg19 BRCA TCGA-BH-A1ES-06A 7 1 Out-of-frame Intra-chr q13 q13 Tumor suppressor gene 22494 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-CSMD1 WHSC1L1 chr8 38172165 - CSMD1 chr8 2796266 - Exonic hg19 BRCA TCGA-BH-A1ES-06A 4 7 Out-of-frame Intra-chr p11.23 Tumor suppressor gene p23.2 Tumor suppressor gene Seq+ 22495 ChimerSeq STARFusion TCGA_RNA-Seq CACNG4-PITPNC1 CACNG4 chr17 64961247 + PITPNC1 chr17 65528918 + Exonic hg19 BRCA TCGA-BH-A1ES-06A 3 10 Out-of-frame Intra-chr q24.2 q24.2 22496 ChimerSeq STARFusion TCGA_RNA-Seq PLD2-ZZEF1 PLD2 chr17 4712846 + ZZEF1 chr17 4009103 - Exonic hg19 BRCA TCGA-BH-A1ES-06A 2 3 In-Frame Intra-chr p13.2 p13.2 Seq+ 22497 ChimerSeq STARFusion TCGA_RNA-Seq LINC00238-GPHN LINC00238 chr14 66958912 + GPHN chr14 67147825 + Exonic hg19 BRCA TCGA-BH-A1ES-06A 2 2 5'UTR-CDS Intra-chr q23.3 q23.3 22498 ChimerSeq STARFusion TCGA_RNA-Seq UNK-ICAM2 UNK chr17 73781065 + ICAM2 chr17 62084095 - Exonic hg19 BRCA TCGA-BH-A1ES-06A 2 2 5'UTR-5'UTR Intra-chr q25.1 q23.3 Seq+ 22499 ChimerSeq STARFusion TCGA_RNA-Seq DHX35-DNTTIP1 DHX35 chr20 37612419 + DNTTIP1 chr20 44439524 + Exonic hg19 BRCA TCGA-AR-A0TW-01A 13 68 In-Frame Intra-chr q11.23 q13.12 Transcription factor Seq+ 22500 ChimerSeq STARFusion TCGA_RNA-Seq MED23-KLHL32 MED23 chr6 131939547 - KLHL32 chr6 97489368 + Exonic hg19 BRCA TCGA-AR-A0TW-01A 11 62 In-Frame Intra-chr q23.2 q16.1 Seq+ 22501 ChimerSeq STARFusion TCGA_RNA-Seq DHX35-DNTTIP1 DHX35 chr20 37612419 + DNTTIP1 chr20 44439696 + Exonic hg19 BRCA TCGA-AR-A0TW-01A 2 68 Out-of-frame Intra-chr q11.23 q13.12 Transcription factor Seq+ 22502 ChimerSeq STARFusion TCGA_RNA-Seq WDR70-PLCXD3 WDR70 chr5 37516692 + PLCXD3 chr5 41313872 - Exonic hg19 BRCA TCGA-AR-A0TW-01A 5 36 In-Frame Intra-chr p13.2 p13.1 Seq+ 22503 ChimerSeq STARFusion TCGA_RNA-Seq VAPB-CASS4 VAPB chr20 56964573 + CASS4 chr20 55033396 + Exonic hg19 BRCA TCGA-AR-A0TW-01A 8 21 Out-of-frame Intra-chr q13.32 q13.31 Seq+ 22504 ChimerSeq STARFusion TCGA_RNA-Seq ADCY1-EYA4 ADCY1 chr7 45614781 + EYA4 chr6 133595854 + Exonic hg19 BRCA TCGA-AR-A0TW-01A 5 23 CDS-5'UTR Inter-chr p12.3 q23.2 Tumor suppressor gene Seq+ 22505 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D15-SEPHS1 TBC1D15 chr12 72266782 + SEPHS1 chr10 13361034 - Exonic hg19 BRCA TCGA-AR-A0TW-01A 3 14 Out-of-frame Inter-chr q21.1 p13 Seq+ 22506 ChimerSeq STARFusion TCGA_RNA-Seq SLC9A8-RAE1 SLC9A8 chr20 48491358 + RAE1 chr20 55949663 + Exonic hg19 BRCA TCGA-AR-A0TW-01A 4 7 Out-of-frame Intra-chr q13.13 q13.31 Seq+ 22507 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC1-NDUFAF6 DNAJC1 chr10 22171211 - NDUFAF6 chr8 96128498 + Exonic hg19 BRCA TCGA-B6-A0IH-01A 5 22 Out-of-frame Inter-chr p12.31 q22.1 Seq+ 22508 ChimerSeq STARFusion TCGA_RNA-Seq SON-C10orf11 SON chr21 34932081 + C10orf11 chr10 78084159 + Exonic hg19 BRCA TCGA-B6-A0IH-01A 2 30 In-Frame Inter-chr q22.11 Transcription factor Seq+ 22509 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC1-NDUFAF6 DNAJC1 chr10 22171211 - NDUFAF6 chr8 96127764 + Exonic hg19 BRCA TCGA-B6-A0IH-01A 3 22 Out-of-frame Inter-chr p12.31 q22.1 Seq+ 22510 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC1-PLEKHF2 DNAJC1 chr10 22171211 - PLEKHF2 chr8 96166259 + Exonic hg19 BRCA TCGA-B6-A0IH-01A 4 7 CDS-5'UTR Inter-chr p12.31 q22.1 Seq+ 22511 ChimerSeq STARFusion TCGA_RNA-Seq PALMD-CCDC171 PALMD chr1 100133322 + CCDC171 chr9 15777598 + Exonic hg19 BRCA TCGA-EW-A1PG-01A 4 1 Out-of-frame Inter-chr p21.2 p22.3 Seq+ 22512 ChimerSeq STARFusion TCGA_RNA-Seq CELSR2-SARS CELSR2 chr1 109816292 + SARS chr1 109780353 + Exonic hg19 BRCA TCGA-BH-A208-01A 16 44 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 22513 ChimerSeq STARFusion TCGA_RNA-Seq WDR20-LINC00605 WDR20 chr14 102661457 + LINC00605 chr14 103654607 - Exonic hg19 BRCA TCGA-BH-A208-01A 3 1 Out-of-frame Intra-chr q32.31 q32.32 22514 ChimerSeq STARFusion TCGA_RNA-Seq ADCY6-DCTN2 ADCY6 chr12 49162720 - DCTN2 chr12 57926098 - Exonic hg19 BRCA TCGA-BH-A208-01A 2 0 In-Frame Intra-chr q13.12 q13.3 22515 ChimerSeq STARFusion TCGA_RNA-Seq GON4L-IQGAP3 GON4L chr1 155823067 - IQGAP3 chr1 156510708 - Exonic hg19 BRCA TCGA-EW-A1OW-01A 13 76 In-Frame Intra-chr q22 q22 Seq+ 22516 ChimerSeq STARFusion TCGA_RNA-Seq RNF220-TMEM53 RNF220 chr1 45115629 + TMEM53 chr1 45120881 - Exonic hg19 BRCA TCGA-EW-A1OW-01A 10 75 In-Frame Intra-chr p34.1 p34.1 Seq+ 22517 ChimerSeq STARFusion TCGA_RNA-Seq RNF220-TMEM53 RNF220 chr1 45115629 + TMEM53 chr1 45120791 - Exonic hg19 BRCA TCGA-EW-A1OW-01A 4 75 In-Frame Intra-chr p34.1 p34.1 Seq+ 22518 ChimerSeq STARFusion TCGA_RNA-Seq LDLRAD4-LOC100131655 LDLRAD4 chr18 13438383 + LOC100131655 chr18 74528798 - Exonic hg19 BRCA TCGA-EW-A1OW-01A 5 9 Out-of-frame Intra-chr p11.21 22519 ChimerSeq STARFusion TCGA_RNA-Seq LOC729970-SLC44A3 LOC729970 chr1 95397541 + SLC44A3 chr1 95356686 + Exonic hg19 BRCA TCGA-EW-A1OW-01A 2 3 5'UTR-CDS Intra-chr p21.3 22520 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB7B-CKS1B ZBTB7B chr1 154975419 + CKS1B chr1 154950463 + Exonic hg19 BRCA TCGA-AO-A1KR-01A 31 37 5'UTR-5'UTR Intra-chr q21.3 Transcription factor q21.3 Oncogene Seq+ 22521 ChimerSeq STARFusion TCGA_RNA-Seq ZNF589-CAMP ZNF589 chr3 48289167 + CAMP chr3 48265844 + Exonic hg19 BRCA TCGA-AO-A1KR-01A 11 67 In-Frame Intra-chr p21.31 Transcription factor p21.31 Seq+ 22522 ChimerSeq STARFusion TCGA_RNA-Seq SPOP-TAC4 SPOP chr17 47755295 - TAC4 chr17 47921519 - Exonic hg19 BRCA TCGA-AO-A1KR-01A 11 33 5'UTR-CDS Intra-chr q21.33 Oncogene Tumor suppressor gene q21.33 Seq+ 22523 ChimerSeq STARFusion TCGA_RNA-Seq NXF1-TAF6L NXF1 chr11 62565060 - TAF6L chr11 62554221 + Exonic hg19 BRCA TCGA-AO-A1KR-01A 9 24 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 22524 ChimerSeq STARFusion TCGA_RNA-Seq CS-PRIM1 CS chr12 56667371 - PRIM1 chr12 57125518 - Exonic hg19 BRCA TCGA-AO-A1KR-01A 3 37 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 22525 ChimerSeq STARFusion TCGA_RNA-Seq SLC3A2-NXF1 SLC3A2 chr11 62623853 + NXF1 chr11 62562479 - Exonic hg19 BRCA TCGA-AO-A1KR-01A 4 26 In-Frame Intra-chr q12.3 q12.3 Seq+ 22526 ChimerSeq STARFusion TCGA_RNA-Seq MRAS-NME9 MRAS chr3 138091918 + NME9 chr3 138025322 - Exonic hg19 BRCA TCGA-AO-A1KR-01A 2 17 In-Frame Intra-chr q22.3 q22.3 Seq+ 22527 ChimerSeq STARFusion TCGA_RNA-Seq MRAS-NME9 MRAS chr3 138091918 + NME9 chr3 138022485 - Exonic hg19 BRCA TCGA-AO-A1KR-01A 2 17 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 22528 ChimerSeq STARFusion TCGA_RNA-Seq ST3GAL1-COL22A1 ST3GAL1 chr8 134487962 - COL22A1 chr8 139715590 - Exonic hg19 BRCA TCGA-AO-A1KR-01A 2 14 In-Frame Intra-chr q24.22 q24.3 Seq+ 22529 ChimerSeq STARFusion TCGA_RNA-Seq CPAMD8-HAUS8 CPAMD8 chr19 17085907 - HAUS8 chr19 17160986 - Exonic hg19 BRCA TCGA-AO-A1KR-01A 2 7 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 22530 ChimerSeq STARFusion TCGA_RNA-Seq FNIP2-LARP7 FNIP2 chr4 159756628 + LARP7 chr4 113571617 + Exonic hg19 BRCA TCGA-AO-A1KR-01A 3 2 In-Frame Intra-chr q32.1 q25 Seq+ 22531 ChimerSeq STARFusion TCGA_RNA-Seq FEM1A-SELM FEM1A chr19 4795149 + SELM chr22 31501951 - Exonic hg19 BRCA TCGA-AO-A1KR-01A 3 0 3'UTR-CDS Inter-chr p13.3 22532 ChimerSeq STARFusion TCGA_RNA-Seq XDH-MIR4426 XDH chr2 31562355 - MIR4426 chr2 55461967 + Exonic hg19 BRCA TCGA-AO-A1KR-01A 2 0 CDS-5'UTR Intra-chr p23.1 q31.2 22533 ChimerSeq STARFusion TCGA_RNA-Seq XDH-RPS27A XDH chr2 31562355 - RPS27A chr2 55461967 + Exonic hg19 BRCA TCGA-AO-A1KR-01A 2 0 In-Frame Intra-chr p23.1 p16.1 22534 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 BRCA TCGA-C8-A12N-01A 3 1 In-Frame Intra-chr p11.21 p11.21 22535 ChimerSeq STARFusion TCGA_RNA-Seq AHI1-MYB AHI1 chr6 135679270 - MYB chr6 135539002 + Exonic hg19 BRCA TCGA-A2-A3XS-01A 2 53 In-Frame Intra-chr q23.3 q23.3 Oncogene Transcription factor Seq+ 22536 ChimerSeq STARFusion TCGA_RNA-Seq NCOA6-GSS NCOA6 chr20 33413275 - GSS chr20 33539663 - Exonic hg19 BRCA TCGA-A2-A3XS-01A 3 10 5'UTR-5'UTR Intra-chr q11.22 q11.22 Seq+ 22537 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983374 - RSRC2 chr12 122990253 - Exonic hg19 BRCA TCGA-A8-A09M-01A 44 153 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 22538 ChimerSeq STARFusion TCGA_RNA-Seq PIEZO1-APRT PIEZO1 chr16 88792691 - APRT chr16 88876247 - Exonic hg19 BRCA TCGA-A8-A09M-01A 35 158 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 22539 ChimerSeq STARFusion TCGA_RNA-Seq HIBCH-CTNNA2 HIBCH chr2 191175480 - CTNNA2 chr2 80620336 + Exonic hg19 BRCA TCGA-A8-A09M-01A 6 17 In-Frame Intra-chr q32.2 p12 Tumor suppressor gene Seq+ 22540 ChimerSeq STARFusion TCGA_RNA-Seq SLC38A6-LRRC37A SLC38A6 chr14 61497241 + LRRC37A chr17 44377160 + Exonic hg19 BRCA TCGA-A8-A09M-01A 2 1 In-Frame Inter-chr q23.1 22541 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP32-C20orf24 ARHGAP32 chr11 128932175 - C20orf24 chr20 35236118 + Exonic hg19 BRCA TCGA-EW-A2FW-01A 21 80 In-Frame Inter-chr q24.3 q11.23 Seq+ 22542 ChimerSeq STARFusion TCGA_RNA-Seq CPT1A-KCNG1 CPT1A chr11 68548108 - KCNG1 chr20 49628953 - Exonic hg19 BRCA TCGA-EW-A2FW-01A 5 18 CDS-5'UTR Inter-chr q13.3 q13.13 Seq+ 22543 ChimerSeq STARFusion TCGA_RNA-Seq CPT1A-KCNG1 CPT1A chr11 68548108 - KCNG1 chr20 49626901 - Exonic hg19 BRCA TCGA-EW-A2FW-01A 2 18 CDS-5'UTR Inter-chr q13.3 q13.13 Seq+ 22544 ChimerSeq STARFusion TCGA_RNA-Seq PLCG1-TAF4 PLCG1 chr20 39766498 + TAF4 chr20 60584230 - Exonic hg19 BRCA TCGA-EW-A2FW-01A 5 5 Out-of-frame Intra-chr q12 Oncogene Seq+ 22545 ChimerSeq STARFusion TCGA_RNA-Seq FAM69A-NTNG1 FAM69A chr1 93426933 - NTNG1 chr1 108023233 + Exonic hg19 BRCA TCGA-EW-A2FW-01A 3 11 Out-of-frame Intra-chr p22.1 p13.3 Seq+ 22546 ChimerSeq STARFusion TCGA_RNA-Seq PTPN1-ROMO1 PTPN1 chr20 49191191 + ROMO1 chr20 34287555 + Exonic hg19 BRCA TCGA-EW-A2FW-01A 3 8 CDS-5'UTR Intra-chr q13.13 Tumor suppressor gene q11.22 Seq+ 22547 ChimerSeq STARFusion TCGA_RNA-Seq MAGED2-TRO MAGED2 chrX 54839457 + TRO chrX 54953016 + Exonic hg19 BRCA TCGA-EW-A2FW-01A 3 4 In-Frame Intra-chr p11.21 p11.21 22548 ChimerSeq STARFusion TCGA_RNA-Seq ERGIC3-TRMT6 ERGIC3 chr20 34136618 + TRMT6 chr20 5927179 - Exonic hg19 BRCA TCGA-EW-A2FW-01A 2 7 Out-of-frame Intra-chr q11.22 p12.3 Seq+ 22549 ChimerSeq STARFusion TCGA_RNA-Seq MIB2-SMIM13 MIB2 chr1 1551994 + SMIM13 chr6 11134636 + Exonic hg19 BRCA TCGA-C8-A12K-01A 9 73 Out-of-frame Inter-chr p36.33 p24.2 Seq+ 22550 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3A-RB1 FNDC3A chr13 49688867 + RB1 chr13 49037867 + Exonic hg19 BRCA TCGA-C8-A12K-01A 10 63 In-Frame Intra-chr q14.2 q14.2 Oncogene Tumor suppressor gene Seq+ 22551 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3A-RB1 FNDC3A chr13 49688867 + RB1 chr13 49039134 + Exonic hg19 BRCA TCGA-C8-A12K-01A 3 58 In-Frame Intra-chr q14.2 q14.2 Oncogene Tumor suppressor gene Seq+ 22552 ChimerSeq STARFusion TCGA_RNA-Seq ARID4B-CARD10 ARID4B chr1 235311719 - CARD10 chr22 37900776 - Exonic hg19 BRCA TCGA-C8-A12K-01A 11 19 3'UTR-CDS Inter-chr q42.3 q13.1 Seq+ 22553 ChimerSeq STARFusion TCGA_RNA-Seq RBM34-CARD10 RBM34 chr1 235311719 - CARD10 chr22 37900776 - Exonic hg19 BRCA TCGA-C8-A12K-01A 11 19 Out-of-frame Inter-chr q42.3 q13.1 Seq+ 22554 ChimerSeq STARFusion TCGA_RNA-Seq CGGBP1-DDX11L1 CGGBP1 chr3 88190120 - DDX11L1 chr1 12010 + Exonic hg19 BRCA TCGA-C8-A12K-01A 7 24 5'UTR-3'UTR Inter-chr p11.1 Transcription factor p36.33 22555 ChimerSeq STARFusion TCGA_RNA-Seq PLXDC2-AMD1P1 PLXDC2 chr10 20534434 + AMD1P1 chr10 20639003 + Exonic hg19 BRCA TCGA-C8-A12K-01A 8 20 Out-of-frame Intra-chr p12.31 p12.31 22556 ChimerSeq STARFusion TCGA_RNA-Seq ALG2-RPL30 ALG2 chr9 101984074 - RPL30 chr8 99057626 - Exonic hg19 BRCA TCGA-C8-A12K-01A 12 1 Out-of-frame Inter-chr q22.33 q22.2 22557 ChimerSeq STARFusion TCGA_RNA-Seq RRBP1-RBBP8 RRBP1 chr20 17660644 - RBBP8 chr18 20491563 + Exonic hg19 BRCA TCGA-C8-A12K-01A 4 30 5'UTR-5'UTR Inter-chr p12.1 q11.2 Tumor suppressor gene Seq+ 22558 ChimerSeq STARFusion TCGA_RNA-Seq WASH2P-KIF6 WASH2P chr2 114341713 + KIF6 chr6 39313565 - Exonic hg19 BRCA TCGA-C8-A12K-01A 10 0 5'UTR-CDS Inter-chr q14.1 p21.2 22559 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD1-ST18 PCMTD1 chr8 52773405 - ST18 chr8 53062537 - Exonic hg19 BRCA TCGA-C8-A12K-01A 5 17 Out-of-frame Intra-chr q11.23 q11.23 Transcription factor Seq+ 22560 ChimerSeq STARFusion TCGA_RNA-Seq WASH2P-KIF6 WASH2P chr2 114341713 + KIF6 chr6 39314302 - Exonic hg19 BRCA TCGA-C8-A12K-01A 9 0 5'UTR-CDS Inter-chr q14.1 p21.2 22561 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD1-ST18 PCMTD1 chr8 52773421 - ST18 chr8 53062537 - Exonic hg19 BRCA TCGA-C8-A12K-01A 2 16 Out-of-frame Intra-chr q11.23 q11.23 Transcription factor Seq+ 22562 ChimerSeq STARFusion TCGA_RNA-Seq UCKL1-TXN UCKL1 chr20 62587613 - TXN chr9 113013742 - Exonic hg19 BRCA TCGA-C8-A12K-01A 4 8 Out-of-frame Inter-chr q13.33 q31.3 Seq+ 22563 ChimerSeq STARFusion TCGA_RNA-Seq TGIF2-DLGAP4 TGIF2 chr20 35207369 + DLGAP4 chr20 35068157 + Exonic hg19 BRCA TCGA-C8-A12K-01A 2 15 Out-of-frame Intra-chr q11.23 Transcription factor q11.23 Seq+ 22564 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0922-MND1 KIAA0922 chr4 154525582 + MND1 chr4 154315414 + Exonic hg19 BRCA TCGA-C8-A12K-01A 3 10 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 22565 ChimerSeq STARFusion TCGA_RNA-Seq CUTC-C19orf57 CUTC chr10 101514391 + C19orf57 chr19 14003703 - Exonic hg19 BRCA TCGA-C8-A12K-01A 2 10 Out-of-frame Inter-chr q24.2 p13.12 Seq+ 22566 ChimerSeq STARFusion TCGA_RNA-Seq PPFIBP1-SMCO2 PPFIBP1 chr12 27677298 + SMCO2 chr12 27648613 + Exonic hg19 BRCA TCGA-C8-A12K-01A 2 10 Out-of-frame Intra-chr p11.23 p11.23 22567 ChimerSeq STARFusion TCGA_RNA-Seq RPS29-POLE2 RPS29 chr14 50053003 - POLE2 chr14 50122561 - Exonic hg19 BRCA TCGA-C8-A12K-01A 2 10 In-Frame Intra-chr q21.3 q21.3 22568 ChimerSeq STARFusion TCGA_RNA-Seq NVL-WDR26 NVL chr1 224499502 - WDR26 chr1 224574204 - Exonic hg19 BRCA TCGA-C8-A12K-01A 2 9 CDS-3'UTR Intra-chr q42.11 q42.12 Seq+ 22569 ChimerSeq STARFusion TCGA_RNA-Seq SMIM13-MIB2 SMIM13 chr6 11094622 + MIB2 chr1 1551888 + Exonic hg19 BRCA TCGA-C8-A12K-01A 2 9 Out-of-frame Inter-chr p24.2 p36.33 Seq+ 22570 ChimerSeq STARFusion TCGA_RNA-Seq RHOG-NUP98 RHOG chr11 3862124 - NUP98 chr11 3756554 - Exonic hg19 BRCA TCGA-C8-A12K-01A 2 8 5'UTR-CDS Intra-chr p15.4 p15.4 Oncogene Tumor suppressor gene Seq+ 22571 ChimerSeq STARFusion TCGA_RNA-Seq UBAC2-CLYBL UBAC2 chr13 99890808 + CLYBL chr13 100543572 + Exonic hg19 BRCA TCGA-D8-A1JK-01A 71 301 In-Frame Intra-chr q32.3 q32.3 Seq+ 22572 ChimerSeq STARFusion TCGA_RNA-Seq ZNF292-CGA ZNF292 chr6 87865477 + CGA chr6 87797925 - Exonic hg19 BRCA TCGA-D8-A1JK-01A 59 156 CDS-5'UTR Intra-chr q14.3 Tumor suppressor gene Transcription factor q14.3 Seq+ 22573 ChimerSeq STARFusion TCGA_RNA-Seq CACUL1-EIF3A CACUL1 chr10 120488807 - EIF3A chr10 120818909 - Exonic hg19 BRCA TCGA-D8-A1JK-01A 27 49 Out-of-frame Intra-chr q26.11 q26.11 Seq+ 22574 ChimerSeq STARFusion TCGA_RNA-Seq ILF3-LOC100507412 ILF3 chr19 10765163 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-D8-A1JK-01A 14 12 5'UTR-5'UTR Inter-chr p13.2 22575 ChimerSeq STARFusion TCGA_RNA-Seq HERC1-DAPK2 HERC1 chr15 64126026 - DAPK2 chr15 64204396 - Exonic hg19 BRCA TCGA-D8-A1JK-01A 8 12 5'UTR-CDS Intra-chr q22.31 q22.31 CAMK:DAPK Tumor suppressor gene Seq+ 22576 ChimerSeq STARFusion TCGA_RNA-Seq KLC1-MARK3 KLC1 chr14 104136620 + MARK3 chr14 103915256 + Exonic hg19 BRCA TCGA-D8-A1JK-01A 6 16 In-Frame Intra-chr q32.33 q32.32 CAMK:CAMKL Seq+ 22577 ChimerSeq STARFusion TCGA_RNA-Seq ADAM9-CLYBL ADAM9 chr8 38854679 + CLYBL chr13 100425078 + Exonic hg19 BRCA TCGA-D8-A1JK-01A 4 19 Out-of-frame Inter-chr q32.3 Seq+ 22578 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-EFCAB3 TANC2 chr17 61278318 + EFCAB3 chr17 60451175 + Exonic hg19 BRCA TCGA-D8-A1JK-01A 5 15 In-Frame Intra-chr q23.2 q23.2 Seq+ 22579 ChimerSeq STARFusion TCGA_RNA-Seq TM2D2-MSI2 TM2D2 chr8 38852837 - MSI2 chr17 55478740 + Exonic hg19 BRCA TCGA-D8-A1JK-01A 4 9 In-Frame Inter-chr p11.22 q22 Seq+ 22580 ChimerSeq STARFusion TCGA_RNA-Seq NKRF-UBE2A NKRF chrX 118726346 - UBE2A chrX 118715470 + Exonic hg19 BRCA TCGA-D8-A1JK-01A 2 14 In-Frame Intra-chr q24 Transcription factor q24 Seq+ 22581 ChimerSeq STARFusion TCGA_RNA-Seq TVP23C-TRIM16 TVP23C chr17 15443747 - TRIM16 chr17 15535988 - Exonic hg19 BRCA TCGA-D8-A1JK-01A 3 6 Out-of-frame Intra-chr p12 p12 22582 ChimerSeq STARFusion TCGA_RNA-Seq CAMTA1-THAP3 CAMTA1 chr1 6845635 + THAP3 chr1 6688559 + Exonic hg19 BRCA TCGA-D8-A1JK-01A 2 3 Out-of-frame Intra-chr p36.31 Tumor suppressor gene Transcription factor p36.31 Transcription factor Seq+ 22583 ChimerSeq STARFusion TCGA_RNA-Seq MRPS6-IFNGR2 MRPS6 chr21 35446045 + IFNGR2 chr21 34787195 + Exonic hg19 BRCA TCGA-D8-A1JK-01A 2 0 Out-of-frame Intra-chr q22.11 22584 ChimerSeq STARFusion TCGA_RNA-Seq SLC5A3-IFNGR2 SLC5A3 chr21 35446045 + IFNGR2 chr21 34787195 + Exonic hg19 BRCA TCGA-D8-A1JK-01A 2 0 5'UTR-CDS Intra-chr q22.11 22585 ChimerSeq STARFusion TCGA_RNA-Seq EEF1A2-DKKL1 EEF1A2 chr20 62121832 - DKKL1 chr19 49877974 + Exonic hg19 BRCA TCGA-D8-A1XD-01A 114 399 In-Frame Inter-chr q13.33 q13.33 Seq+ 22586 ChimerSeq STARFusion TCGA_RNA-Seq RALY-MAP1LC3A RALY chr20 32581937 + MAP1LC3A chr20 33147012 + Exonic hg19 BRCA TCGA-D8-A1XD-01A 47 275 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 22587 ChimerSeq STARFusion TCGA_RNA-Seq RALY-MAP1LC3A RALY chr20 32581937 + MAP1LC3A chr20 33147151 + Exonic hg19 BRCA TCGA-D8-A1XD-01A 20 275 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 22588 ChimerSeq STARFusion TCGA_RNA-Seq RALY-MAP1LC3A RALY chr20 32581937 + MAP1LC3A chr20 33137709 + Exonic hg19 BRCA TCGA-D8-A1XD-01A 7 275 5'UTR-5'UTR Intra-chr q11.22 q11.22 Seq+ 22589 ChimerSeq STARFusion TCGA_RNA-Seq TMEM189-KCNC3 TMEM189 chr20 48770054 - KCNC3 chr19 50827339 - Exonic hg19 BRCA TCGA-D8-A1XD-01A 11 43 Out-of-frame Inter-chr q13.13 q13.33 Seq+ 22590 ChimerSeq STARFusion TCGA_RNA-Seq TMEM189-KCNC3 TMEM189 chr20 48767749 - KCNC3 chr19 50827339 - Exonic hg19 BRCA TCGA-D8-A1XD-01A 3 43 3'UTR-CDS Inter-chr q13.13 q13.33 Seq+ 22591 ChimerSeq STARFusion TCGA_RNA-Seq SPATA13-IKBKB SPATA13 chr13 24735071 + IKBKB chr8 42162705 + Exonic hg19 BRCA TCGA-D8-A1XD-01A 2 23 5'UTR-5'UTR Inter-chr q12.12 p11.21 Oncogene Seq+ 22592 ChimerSeq STARFusion TCGA_RNA-Seq ALDH16A1-PIH1D1 ALDH16A1 chr19 49956678 + PIH1D1 chr19 49952911 - Exonic hg19 BRCA TCGA-D8-A1XD-01A 3 15 Out-of-frame Intra-chr q13.33 q13.33 22593 ChimerSeq STARFusion TCGA_RNA-Seq ZNF600-NFX1 ZNF600 chr19 53282079 - NFX1 chr9 33301261 + Exonic hg19 BRCA TCGA-D8-A1XD-01A 3 10 5'UTR-CDS Inter-chr q13.41 Transcription factor p13.3 Transcription factor Seq+ 22594 ChimerSeq STARFusion TCGA_RNA-Seq ADNP-ZNF841 ADNP chr20 49545188 - ZNF841 chr19 52570863 - Exonic hg19 BRCA TCGA-D8-A1XD-01A 2 9 5'UTR-CDS Inter-chr q13.13 Transcription factor q13.41 Transcription factor Seq+ 22595 ChimerSeq STARFusion TCGA_RNA-Seq ZFP28-ZNF544 ZFP28 chr19 57051085 + ZNF544 chr19 58755331 + Exonic hg19 BRCA TCGA-D8-A1XD-01A 2 6 CDS-5'UTR Intra-chr q13.43 Transcription factor q13.43 Transcription factor 22596 ChimerSeq STARFusion TCGA_RNA-Seq WASF1-BEND3 WASF1 chr6 110500642 - BEND3 chr6 107392154 - Exonic hg19 BRCA TCGA-D8-A1XD-01A 3 1 5'UTR-CDS Intra-chr q21 q21 22597 ChimerSeq STARFusion TCGA_RNA-Seq LOC728190-CTNND1 LOC728190 chr10 89048199 - CTNND1 chr11 57558857 + Exonic hg19 BRCA TCGA-D8-A1XD-01A 2 0 3'UTR-5'UTR Inter-chr q12.1 Tumor suppressor gene 22598 ChimerSeq STARFusion TCGA_RNA-Seq ZNF333-CYP4F22 ZNF333 chr19 14806473 + CYP4F22 chr19 15640520 + Exonic hg19 BRCA TCGA-A2-A0ST-01A 7 14 Out-of-frame Intra-chr p13.12 Transcription factor p13.12 Seq+ 22599 ChimerSeq STARFusion TCGA_RNA-Seq ATP1A1-NOTCH2 ATP1A1 chr1 116926746 + NOTCH2 chr1 120465401 - Exonic hg19 BRCA TCGA-A2-A0ST-01A 2 25 Out-of-frame Intra-chr p13.1 p12 Oncogene Tumor suppressor gene Seq+ 22600 ChimerSeq STARFusion TCGA_RNA-Seq CMTM8-NR1D2 CMTM8 chr3 32280611 + NR1D2 chr3 23996028 + Exonic hg19 BRCA TCGA-A2-A0ST-01A 4 9 Out-of-frame Intra-chr p22.3 p24.2 Transcription factor Seq+ 22601 ChimerSeq STARFusion TCGA_RNA-Seq ZNF346-PAOX ZNF346 chr5 176449914 + PAOX chr10 135202460 + Exonic hg19 BRCA TCGA-A2-A0ST-01A 3 2 In-Frame Inter-chr q35.2 Transcription factor q26.3 Seq+ 22602 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 BRCA TCGA-BH-A2L8-01A 2 9 In-Frame Intra-chr p13.3 p13.3 22603 ChimerSeq STARFusion TCGA_RNA-Seq ATG2A-NRXN2 ATG2A chr11 64669434 - NRXN2 chr11 64481415 - Exonic hg19 BRCA TCGA-EW-A1IW-01A 111 255 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 22604 ChimerSeq STARFusion TCGA_RNA-Seq ATG2A-NRXN2 ATG2A chr11 64669732 - NRXN2 chr11 64481415 - Exonic hg19 BRCA TCGA-EW-A1IW-01A 15 255 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 22605 ChimerSeq STARFusion TCGA_RNA-Seq MS4A7-ATG2A MS4A7 chr11 60150761 + ATG2A chr11 64681972 - Exonic hg19 BRCA TCGA-EW-A1IW-01A 24 32 In-Frame Intra-chr q12.2 q13.1 Seq+ 22606 ChimerSeq STARFusion TCGA_RNA-Seq SDHAF2-C11orf85 SDHAF2 chr11 61205585 + C11orf85 chr11 64727607 - Exonic hg19 BRCA TCGA-EW-A1IW-01A 9 31 CDS-5'UTR Intra-chr q12.2 Seq+ 22607 ChimerSeq STARFusion TCGA_RNA-Seq MS4A7-ATG2A MS4A7 chr11 60154246 + ATG2A chr11 64681972 - Exonic hg19 BRCA TCGA-EW-A1IW-01A 6 32 In-Frame Intra-chr q12.2 q13.1 Seq+ 22608 ChimerSeq STARFusion TCGA_RNA-Seq TPCN2-RARA TPCN2 chr11 68830458 + RARA chr17 38487109 + Exonic hg19 BRCA TCGA-EW-A1IW-01A 7 20 CDS-5'UTR Inter-chr q13.3 q21.2 Oncogene Transcription factor Seq+ 22609 ChimerSeq STARFusion TCGA_RNA-Seq MED1-FBXO47 MED1 chr17 37590502 - FBXO47 chr17 37094985 - Exonic hg19 BRCA TCGA-EW-A1IW-01A 5 12 Out-of-frame Intra-chr q12 Tumor suppressor gene q12 Seq+ 22610 ChimerSeq STARFusion TCGA_RNA-Seq SPEN-CNIH3 SPEN chr1 16255651 + CNIH3 chr1 224927031 + Exonic hg19 BRCA TCGA-EW-A1IW-01A 3 9 Out-of-frame Intra-chr p36.21 Transcription factor q42.12 Seq+ 22611 ChimerSeq STARFusion TCGA_RNA-Seq MYO1D-ORMDL3 MYO1D chr17 31039006 - ORMDL3 chr17 38080478 - Exonic hg19 BRCA TCGA-EW-A1IW-01A 2 3 CDS-5'UTR Intra-chr q11.2 q21.1 Seq+ 22612 ChimerSeq STARFusion TCGA_RNA-Seq ZNF8-LOC100507412 ZNF8 chr19 58797571 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-E2-A2P5-01A 7 64 CDS-5'UTR Inter-chr q13.43 Transcription factor 22613 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-STAU2 TPD52 chr8 81083660 - STAU2 chr8 74601048 - Exonic hg19 BRCA TCGA-E2-A2P5-01A 4 5 Out-of-frame Intra-chr q21.13 q21.11 Seq+ 22614 ChimerSeq STARFusion TCGA_RNA-Seq EPC1-PTGR2 EPC1 chr10 32635691 - PTGR2 chr14 74340726 + Exonic hg19 BRCA TCGA-BH-A0C7-01B 75 167 In-Frame Inter-chr p11.22 q24.3 Seq+ 22615 ChimerSeq STARFusion TCGA_RNA-Seq RBM26-LOC100507412 RBM26 chr13 79951514 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-BH-A0C7-01B 9 105 CDS-5'UTR Inter-chr q31.1 22616 ChimerSeq STARFusion TCGA_RNA-Seq TRIP12-SLC4A10 TRIP12 chr2 230701564 - SLC4A10 chr2 162820645 + Exonic hg19 BRCA TCGA-BH-A0C7-01B 2 86 Out-of-frame Intra-chr q36.3 q24.2 Seq+ 22617 ChimerSeq STARFusion TCGA_RNA-Seq STAM2-THSD7B STAM2 chr2 152982740 - THSD7B chr2 137813990 + Exonic hg19 BRCA TCGA-BH-A0C7-01B 12 19 Out-of-frame Intra-chr q23.3 q22.1 Seq+ 22618 ChimerSeq STARFusion TCGA_RNA-Seq STARD13-TNFRSF8 STARD13 chr13 33859607 - TNFRSF8 chr1 12169623 + Exonic hg19 BRCA TCGA-BH-A0C7-01B 2 8 CDS-3'UTR Inter-chr q13.1 Tumor suppressor gene p36.22 Seq+ 22619 ChimerSeq STARFusion TCGA_RNA-Seq ATP11A-MCF2L ATP11A chr13 113344769 + MCF2L chr13 113728758 + Exonic hg19 BRCA TCGA-A2-A3XT-01A 17 19 In-Frame Intra-chr q34 q34 Seq+ 22620 ChimerSeq STARFusion TCGA_RNA-Seq RSU1-CUBN RSU1 chr10 16858972 - CUBN chr10 16949678 - Exonic hg19 BRCA TCGA-A2-A3XT-01A 4 36 CDS-5'UTR Intra-chr p13 p13 22621 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-IL32 RNA45S5 chrUn_gl000220 110500 + IL32 chr16 3117592 + Exonic hg19 BRCA TCGA-A2-A3XT-01A 3 2 Out-of-frame Inter-chr p13.3 22622 ChimerSeq STARFusion TCGA_RNA-Seq CSPP1-VRK1 CSPP1 chr8 68049838 + VRK1 chr14 97299804 + Exonic hg19 BRCA TCGA-A2-A3XT-01A 2 1 CDS-5'UTR Inter-chr q13.1 q32.2 CK1:VRK Seq+ 22623 ChimerSeq STARFusion TCGA_RNA-Seq PTCHD3P1-GNAS PTCHD3P1 chr10 29704341 + GNAS chr20 57470667 + Exonic hg19 BRCA TCGA-A2-A3XT-01A 2 1 Out-of-frame Inter-chr p11.23 q13.32 Oncogene 22624 ChimerSeq STARFusion TCGA_RNA-Seq ENPP1-UTRN ENPP1 chr6 132198301 + UTRN chr6 145142018 + Exonic hg19 BRCA TCGA-BH-A1FJ-01A 26 73 In-Frame Intra-chr q23.2 q24.2 22625 ChimerSeq STARFusion TCGA_RNA-Seq ENPP1-UTRN ENPP1 chr6 132199733 + UTRN chr6 145142018 + Exonic hg19 BRCA TCGA-BH-A1FJ-01A 6 73 Out-of-frame Intra-chr q23.2 q24.2 22626 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 BRCA TCGA-BH-A1FJ-01A 3 1 In-Frame Intra-chr p11.21 p11.21 22627 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-NCBP2 DGKD chr2 234355442 + NCBP2 chr3 196666303 - Exonic hg19 BRCA TCGA-BH-A1FJ-01A 2 0 In-Frame Inter-chr q29 22628 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-MYO1C YWHAE chr17 1303341 - MYO1C chr17 1387597 - Exonic hg19 BRCA TCGA-BH-A1FJ-01A 2 0 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 22629 ChimerSeq STARFusion TCGA_RNA-Seq IKBKB-FADD IKBKB chr8 42166543 + FADD chr11 70052239 + Exonic hg19 BRCA TCGA-AR-A2LK-01A 11 56 Out-of-frame Inter-chr p11.21 Oncogene q13.3 Tumor suppressor gene Seq+ 22630 ChimerSeq STARFusion TCGA_RNA-Seq IKBKB-FADD IKBKB chr8 42129723 + FADD chr11 70052239 + Exonic hg19 BRCA TCGA-AR-A2LK-01A 2 56 Out-of-frame Inter-chr p11.21 Oncogene q13.3 Tumor suppressor gene Seq+ 22631 ChimerSeq STARFusion TCGA_RNA-Seq C6orf211-WHSC1 C6orf211 chr6 151785753 + WHSC1 chr4 1902353 + Exonic hg19 BRCA TCGA-AR-A2LK-01A 2 0 CDS-5'UTR Inter-chr Oncogene 22632 ChimerSeq STARFusion TCGA_RNA-Seq GUSBP1-FAM134B GUSBP1 chr5 21461975 + FAM134B chr5 16572211 - Exonic hg19 BRCA TCGA-AR-A2LK-01A 2 0 5'UTR-CDS Intra-chr p14.3 22633 ChimerSeq STARFusion TCGA_RNA-Seq PC-OR10G7 PC chr11 66719901 - OR10G7 chr11 123909728 - Exonic hg19 BRCA TCGA-C8-A12W-01A 7 23 5'UTR-5'UTR Intra-chr q13.2 q24.2 22634 ChimerSeq STARFusion TCGA_RNA-Seq PI4KA-FAM19A5 PI4KA chr22 21147481 - FAM19A5 chr22 49103529 + Exonic hg19 BRCA TCGA-C8-A12W-01A 5 11 Out-of-frame Intra-chr q11.21 q13.32 Seq+ 22635 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD17-GC ANKRD17 chr4 74000834 - GC chr4 72631360 - Exonic hg19 BRCA TCGA-C8-A12W-01A 2 5 In-Frame Intra-chr q13.3 q13.3 Seq+ 22636 ChimerSeq STARFusion TCGA_RNA-Seq RBM23-SLC7A8 RBM23 chr14 23388208 - SLC7A8 chr14 23635749 - Exonic hg19 BRCA TCGA-C8-A12W-01A 2 5 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 22637 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC10-SOGA1 TRAPPC10 chr21 45514114 + SOGA1 chr20 35467844 - Exonic hg19 BRCA TCGA-C8-A12W-01A 2 5 In-Frame Inter-chr q22.3 q11.23 Seq+ 22638 ChimerSeq STARFusion TCGA_RNA-Seq KAT6A-ADAM2 KAT6A chr8 41905896 - ADAM2 chr8 39627094 - Exonic hg19 BRCA TCGA-E2-A15A-01A 56 279 Out-of-frame Intra-chr p11.21 Oncogene Seq+ 22639 ChimerSeq STARFusion TCGA_RNA-Seq KAT6A-ADAM2 KAT6A chr8 41905896 - ADAM2 chr8 39624770 - Exonic hg19 BRCA TCGA-E2-A15A-01A 39 279 In-Frame Intra-chr p11.21 Oncogene Seq+ 22640 ChimerSeq STARFusion TCGA_RNA-Seq KAT6A-ADAM2 KAT6A chr8 41905896 - ADAM2 chr8 39646259 - Exonic hg19 BRCA TCGA-E2-A15A-01A 11 279 In-Frame Intra-chr p11.21 Oncogene Seq+ 22641 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-ANK1 WHSC1L1 chr8 38205015 - ANK1 chr8 41615655 - Exonic hg19 BRCA TCGA-E2-A15A-01A 8 259 In-Frame Intra-chr p11.23 Tumor suppressor gene p11.21 Seq+ 22642 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-FGFR1 WHSC1L1 chr8 38239317 - FGFR1 chr8 38315052 - Exonic hg19 BRCA TCGA-E2-A15A-01A 27 89 5'UTR-5'UTR Intra-chr p11.23 Tumor suppressor gene p11.23 TK:FGFR Oncogene Seq+ 22643 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-FGFR1 WHSC1L1 chr8 38239317 - FGFR1 chr8 38318773 - Exonic hg19 BRCA TCGA-E2-A15A-01A 3 89 5'UTR-5'UTR Intra-chr p11.23 Tumor suppressor gene p11.23 TK:FGFR Oncogene Seq+ 22644 ChimerSeq STARFusion TCGA_RNA-Seq DYRK1A-KDM4B DYRK1A chr21 38739930 + KDM4B chr19 5039847 + Exonic hg19 BRCA TCGA-E2-A15A-01A 13 7 5'UTR-CDS Inter-chr q22.13 CMGC:DYRK p13.3 Seq+ 22645 ChimerSeq STARFusion TCGA_RNA-Seq ASH2L-MGME1 ASH2L chr8 37971805 + MGME1 chr20 17968809 + Exonic hg19 BRCA TCGA-E2-A15A-01A 5 34 Out-of-frame Inter-chr p11.23 p11.23 Seq+ 22646 ChimerSeq STARFusion TCGA_RNA-Seq PRICKLE3-CACNA1F PRICKLE3 chrX 49040187 - CACNA1F chrX 49065853 - Exonic hg19 BRCA TCGA-E2-A15A-01A 6 29 In-Frame Intra-chr p11.23 p11.23 Seq+ 22647 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-FADD PPP6R3 chr11 68228295 + FADD chr11 70052239 + Exonic hg19 BRCA TCGA-E2-A15A-01A 3 39 5'UTR-CDS Intra-chr q13.2 q13.3 Tumor suppressor gene Seq+ 22648 ChimerSeq STARFusion TCGA_RNA-Seq ASH2L-MGME1 ASH2L chr8 37968351 + MGME1 chr20 17970582 + Exonic hg19 BRCA TCGA-E2-A15A-01A 4 34 Out-of-frame Inter-chr p11.23 p11.23 Seq+ 22649 ChimerSeq STARFusion TCGA_RNA-Seq ATP1A1-VANGL1 ATP1A1 chr1 116916145 + VANGL1 chr1 116206282 + Exonic hg19 BRCA TCGA-E2-A15A-01A 6 20 In-Frame Intra-chr p13.1 p13.1 Seq+ 22650 ChimerSeq STARFusion TCGA_RNA-Seq ASH2L-MGME1 ASH2L chr8 37968351 + MGME1 chr20 17968809 + Exonic hg19 BRCA TCGA-E2-A15A-01A 2 34 Out-of-frame Inter-chr p11.23 p11.23 Seq+ 22651 ChimerSeq STARFusion TCGA_RNA-Seq ASH2L-MGME1 ASH2L chr8 37971805 + MGME1 chr20 17970582 + Exonic hg19 BRCA TCGA-E2-A15A-01A 2 34 Out-of-frame Inter-chr p11.23 p11.23 Seq+ 22652 ChimerSeq STARFusion TCGA_RNA-Seq ATP1A1-VANGL1 ATP1A1 chr1 116916145 + VANGL1 chr1 116224985 + Exonic hg19 BRCA TCGA-E2-A15A-01A 2 20 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 22653 ChimerSeq STARFusion TCGA_RNA-Seq ALG8-OXA1L ALG8 chr11 77812139 - OXA1L chr14 23237167 + Exonic hg19 BRCA TCGA-E2-A15A-01A 3 6 Out-of-frame Inter-chr q14.1 q11.2 Seq+ 22654 ChimerSeq STARFusion TCGA_RNA-Seq TXNDC11-ZC3H7A TXNDC11 chr16 11836333 - ZC3H7A chr16 11850226 - Exonic hg19 BRCA TCGA-E2-A15A-01A 2 10 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 22655 ChimerSeq STARFusion TCGA_RNA-Seq FAM168A-UVRAG FAM168A chr11 73308968 - UVRAG chr11 75572791 + Exonic hg19 BRCA TCGA-E2-A15A-01A 3 5 5'UTR-CDS Intra-chr q13.4 q13.5 Tumor suppressor gene Seq+ 22656 ChimerSeq STARFusion TCGA_RNA-Seq FKBP3-NUB1 FKBP3 chr14 45598997 - NUB1 chr7 151064025 + Exonic hg19 BRCA TCGA-E2-A15A-01A 2 2 Out-of-frame Inter-chr q21.2 q36.1 Seq+ 22657 ChimerSeq STARFusion TCGA_RNA-Seq SMARCA4-DNM2 SMARCA4 chr19 11071850 + DNM2 chr19 10883155 + Exonic hg19 BRCA TCGA-A7-A4SD-01A 12 44 5'UTR-CDS Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 22658 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS16-ETV6 ADAMTS16 chr5 5209359 + ETV6 chr12 11905384 + Exonic hg19 BRCA TCGA-A7-A4SD-01A 3 72 In-Frame Inter-chr p15.32 p13.2 Tumor suppressor gene Transcription factor Seq+ 22659 ChimerSeq STARFusion TCGA_RNA-Seq ITPR2-ANO2 ITPR2 chr12 26580846 - ANO2 chr12 5941769 - Exonic hg19 BRCA TCGA-A7-A4SD-01A 10 31 In-Frame Intra-chr p11.23 p13.31 Seq+ 22660 ChimerSeq STARFusion TCGA_RNA-Seq XIST-TSIX XIST chrX 73069447 - TSIX chrX 73021254 + Exonic hg19 BRCA TCGA-A7-A4SD-01A 4 52 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 22661 ChimerSeq STARFusion TCGA_RNA-Seq CD9-ADAMTS12 CD9 chr12 6334700 + ADAMTS12 chr5 33684160 - Exonic hg19 BRCA TCGA-A7-A4SD-01A 3 31 In-Frame Inter-chr p13.31 p13.2 Seq+ 22662 ChimerSeq STARFusion TCGA_RNA-Seq CYP51A1-BAIAP2L1 CYP51A1 chr7 91752434 - BAIAP2L1 chr7 97991744 - Exonic hg19 BRCA TCGA-A7-A4SD-01A 2 22 In-Frame Intra-chr q21.2 q22.1 Seq+ 22663 ChimerSeq STARFusion TCGA_RNA-Seq SLC4A8-ZFP36L1 SLC4A8 chr12 51856240 + ZFP36L1 chr14 69256385 - Exonic hg19 BRCA TCGA-A7-A4SD-01A 3 15 In-Frame Inter-chr q13.13 q24.1 Seq+ 22664 ChimerSeq STARFusion TCGA_RNA-Seq TTLL4-RQCD1 TTLL4 chr2 219575760 + RQCD1 chr2 219445284 + Exonic hg19 BRCA TCGA-A7-A4SD-01A 3 7 5'UTR-CDS Intra-chr q35 Seq+ 22665 ChimerSeq STARFusion TCGA_RNA-Seq DNMT3A-ADCY3 DNMT3A chr2 25523008 - ADCY3 chr2 25065253 - Exonic hg19 BRCA TCGA-A7-A4SD-01A 3 4 In-Frame Intra-chr p23.3 Oncogene Tumor suppressor gene p23.3 Seq+ 22666 ChimerSeq STARFusion TCGA_RNA-Seq GALNT10-C5orf4 GALNT10 chr5 153570585 + C5orf4 chr5 154217738 - Exonic hg19 BRCA TCGA-A7-A4SD-01A 2 2 CDS-5'UTR Intra-chr q33.2 Seq+ 22667 ChimerSeq STARFusion TCGA_RNA-Seq PRICKLE1-SND1 PRICKLE1 chr12 42983267 - SND1 chr7 127361341 + Exonic hg19 BRCA TCGA-A7-A4SD-01A 2 2 5'UTR-CDS Inter-chr q12 Tumor suppressor gene q32.1 Seq+ 22668 ChimerSeq STARFusion TCGA_RNA-Seq STAT5B-PTRF STAT5B chr17 40428266 - PTRF chr17 40557406 - Exonic hg19 BRCA TCGA-A7-A4SD-01A 2 2 5'UTR-CDS Intra-chr q21.2 Transcription factor 22669 ChimerSeq STARFusion TCGA_RNA-Seq DTNB-DNMT3A DTNB chr2 25830105 - DNMT3A chr2 25505580 - Exonic hg19 BRCA TCGA-A7-A4SD-01A 2 1 Out-of-frame Intra-chr p23.3 p23.3 Oncogene Tumor suppressor gene 22670 ChimerSeq STARFusion TCGA_RNA-Seq SNAP29-IGLL1 SNAP29 chr22 21224821 + IGLL1 chr22 23917269 - Exonic hg19 BRCA TCGA-PE-A5DE-01A 28 221 In-Frame Intra-chr q11.21 q11.23 Seq+ 22671 ChimerSeq STARFusion TCGA_RNA-Seq SNAP29-IGLL1 SNAP29 chr22 21224821 + IGLL1 chr22 23917272 - Exonic hg19 BRCA TCGA-PE-A5DE-01A 5 221 Out-of-frame Intra-chr q11.21 q11.23 Seq+ 22672 ChimerSeq STARFusion TCGA_RNA-Seq CHKA-UBE2QL1 CHKA chr11 67888295 - UBE2QL1 chr5 6492141 + Exonic hg19 BRCA TCGA-E2-A1BC-01A 17 23 CDS-3'UTR Inter-chr q13.2 p15.31 Tumor suppressor gene Seq+ 22673 ChimerSeq STARFusion TCGA_RNA-Seq MAGED2-TRO MAGED2 chrX 54839457 + TRO chrX 54953016 + Exonic hg19 BRCA TCGA-E2-A1BC-01A 8 0 In-Frame Intra-chr p11.21 p11.21 22674 ChimerSeq STARFusion TCGA_RNA-Seq KAT6A-ADAM5 KAT6A chr8 41905896 - ADAM5 chr8 39258852 + Exonic hg19 BRCA TCGA-A7-A0D9-01A 258 1010 Out-of-frame Intra-chr p11.21 Oncogene p11.22 Seq+ 22675 ChimerSeq STARFusion TCGA_RNA-Seq KAT6A-ADAM5 KAT6A chr8 41906688 - ADAM5 chr8 39258852 + Exonic hg19 BRCA TCGA-A7-A0D9-01A 69 1010 Out-of-frame Intra-chr p11.21 Oncogene p11.22 Seq+ 22676 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-RAB11FIP1 WHSC1L1 chr8 38153313 - RAB11FIP1 chr8 37735068 - Exonic hg19 BRCA TCGA-A7-A0D9-01A 51 339 Out-of-frame Intra-chr p11.23 Tumor suppressor gene p11.23 Seq+ 22677 ChimerSeq STARFusion TCGA_RNA-Seq TMED3-KIAA1024 TMED3 chr15 79606347 + KIAA1024 chr15 79748440 + Exonic hg19 BRCA TCGA-A7-A0D9-01A 3 21 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 22678 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D9B-KRT19 TBC1D9B chr5 179294807 - KRT19 chr17 39684186 - Exonic hg19 BRCA TCGA-A7-A0D9-01A 7 1 Out-of-frame Inter-chr q21.2 Tumor suppressor gene 22679 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-GNAS ESR1 chr6 152163922 + GNAS chr20 57470667 + Exonic hg19 BRCA TCGA-A7-A0D9-01A 2 4 In-Frame Inter-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q13.32 Oncogene Seq+ 22680 ChimerSeq STARFusion TCGA_RNA-Seq RAB22A-NEUROD2 RAB22A chr20 56886178 + NEUROD2 chr17 37764318 - Exonic hg19 BRCA TCGA-OL-A5RZ-01A 82 309 CDS-5'UTR Inter-chr q13.32 q12 Transcription factor Seq+ 22681 ChimerSeq STARFusion TCGA_RNA-Seq SCMH1-GPBP1L1 SCMH1 chr1 41707731 - GPBP1L1 chr1 46099908 - Exonic hg19 BRCA TCGA-OL-A5RZ-01A 22 54 5'UTR-CDS Intra-chr p34.2 Transcription factor p34.1 Transcription factor Seq+ 22682 ChimerSeq STARFusion TCGA_RNA-Seq PRDX1-TMEM53 PRDX1 chr1 45984610 - TMEM53 chr1 45111136 - Exonic hg19 BRCA TCGA-OL-A5RZ-01A 12 56 CDS-3'UTR Intra-chr p34.1 p34.1 Seq+ 22683 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-CCDC144B FBXL20 chr17 37499433 - CCDC144B chr17 18483924 - Exonic hg19 BRCA TCGA-OL-A5RZ-01A 12 41 CDS-3'UTR Intra-chr q12 p11.2 22684 ChimerSeq STARFusion TCGA_RNA-Seq CCDC144B-PPM1E CCDC144B chr17 18482971 - PPM1E chr17 57033010 + Exonic hg19 BRCA TCGA-OL-A5RZ-01A 8 47 3'UTR-CDS Intra-chr p11.2 q22 22685 ChimerSeq STARFusion TCGA_RNA-Seq HYI-NFIA HYI chr1 43917319 - NFIA chr1 61798184 + Exonic hg19 BRCA TCGA-OL-A5RZ-01A 15 17 In-Frame Intra-chr p34.2 p31.3 Transcription factor Seq+ 22686 ChimerSeq STARFusion TCGA_RNA-Seq SPAG5-SLC47A1 SPAG5 chr17 26912882 - SLC47A1 chr17 19445706 + Exonic hg19 BRCA TCGA-OL-A5RZ-01A 6 49 In-Frame Intra-chr q11.2 p11.2 Seq+ 22687 ChimerSeq STARFusion TCGA_RNA-Seq SPAG5-SLC47A1 SPAG5 chr17 26913108 - SLC47A1 chr17 19445706 + Exonic hg19 BRCA TCGA-OL-A5RZ-01A 5 49 In-Frame Intra-chr q11.2 p11.2 Seq+ 22688 ChimerSeq STARFusion TCGA_RNA-Seq PPM1E-SPAG5 PPM1E chr17 57043254 + SPAG5 chr17 26913200 - Exonic hg19 BRCA TCGA-OL-A5RZ-01A 6 39 In-Frame Intra-chr q22 q11.2 Seq+ 22689 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-PPM1E FBXL20 chr17 37499433 - PPM1E chr17 57033010 + Exonic hg19 BRCA TCGA-OL-A5RZ-01A 7 28 In-Frame Intra-chr q12 q22 Seq+ 22690 ChimerSeq STARFusion TCGA_RNA-Seq TOM1L1-TMEM11 TOM1L1 chr17 53027487 + TMEM11 chr17 21102153 - Exonic hg19 BRCA TCGA-OL-A5RZ-01A 6 27 In-Frame Intra-chr q22 p11.2 Seq+ 22691 ChimerSeq STARFusion TCGA_RNA-Seq HIVEP3-GPBP1L1 HIVEP3 chr1 42330249 - GPBP1L1 chr1 46099908 - Exonic hg19 BRCA TCGA-OL-A5RZ-01A 6 14 5'UTR-CDS Intra-chr p34.2 Tumor suppressor gene Transcription factor p34.1 Transcription factor Seq+ 22692 ChimerSeq STARFusion TCGA_RNA-Seq PTPRF-HIVEP3 PTPRF chr1 44003948 + HIVEP3 chr1 42166666 - Exonic hg19 BRCA TCGA-OL-A5RZ-01A 5 8 5'UTR-5'UTR Intra-chr p34.2 p34.2 Tumor suppressor gene Transcription factor Seq+ 22693 ChimerSeq STARFusion TCGA_RNA-Seq HIVEP3-GPBP1L1 HIVEP3 chr1 42335218 - GPBP1L1 chr1 46099908 - Exonic hg19 BRCA TCGA-OL-A5RZ-01A 2 14 5'UTR-CDS Intra-chr p34.2 Tumor suppressor gene Transcription factor p34.1 Transcription factor Seq+ 22694 ChimerSeq STARFusion TCGA_RNA-Seq RPL19-RPS24 RPL19 chr17 37359365 + RPS24 chr10 79800367 + Exonic hg19 BRCA TCGA-OL-A5RZ-01A 3 8 Out-of-frame Inter-chr q12 q22.3 22695 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-SLC35E3 MDM2 chr12 69218431 + SLC35E3 chr12 69187068 + Exonic hg19 BRCA TCGA-E2-A1LS-01A 29 99 CDS-3'UTR Intra-chr q15 Oncogene q15 22696 ChimerSeq STARFusion TCGA_RNA-Seq DPYD-STAB2 DPYD chr1 98348820 - STAB2 chr12 104054109 + Exonic hg19 BRCA TCGA-BH-A1EU-01A 5 20 In-Frame Inter-chr p21.3 Oncogene q23.3 Seq+ 22697 ChimerSeq STARFusion TCGA_RNA-Seq EXOC4-ATM EXOC4 chr7 133692588 + ATM chr11 108114680 + Exonic hg19 BRCA TCGA-BH-A1EU-01A 2 3 Out-of-frame Inter-chr q33 q22.3 Atypical:PIKK Oncogene Tumor suppressor gene Seq+ 22698 ChimerSeq STARFusion TCGA_RNA-Seq SPG20-PHF20L1 SPG20 chr13 36900712 - PHF20L1 chr8 133829133 + Exonic hg19 BRCA TCGA-BH-A1EU-01A 2 0 In-Frame Inter-chr q13.3 q24.22 22699 ChimerSeq STARFusion TCGA_RNA-Seq KDM5A-ANO2 KDM5A chr12 427272 - ANO2 chr12 5708795 - Exonic hg19 BRCA TCGA-A1-A0SK-01A 98 280 In-Frame Intra-chr p13.33 Tumor suppressor gene p13.31 Seq+ 22700 ChimerSeq STARFusion TCGA_RNA-Seq IP6K2-PRKAR2A IP6K2 chr3 48754590 - PRKAR2A chr3 48802782 - Exonic hg19 BRCA TCGA-A1-A0SK-01A 113 93 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 22701 ChimerSeq STARFusion TCGA_RNA-Seq SRF-F5 SRF chr6 43141851 + F5 chr1 169483697 - Exonic hg19 BRCA TCGA-A1-A0SK-01A 31 94 In-Frame Inter-chr p21.1 Transcription factor q24.2 Seq+ 22702 ChimerSeq STARFusion TCGA_RNA-Seq CHD4-DTX1 CHD4 chr12 6690210 - DTX1 chr12 113515229 + Exonic hg19 BRCA TCGA-A1-A0SK-01A 20 46 In-Frame Intra-chr p13.31 q24.13 Seq+ 22703 ChimerSeq STARFusion TCGA_RNA-Seq PIK3C2G-PPFIBP1 PIK3C2G chr12 18552781 + PPFIBP1 chr12 27826700 + Exonic hg19 BRCA TCGA-A1-A0SK-01A 3 33 In-Frame Intra-chr p12.3 p11.23 Seq+ 22704 ChimerSeq STARFusion TCGA_RNA-Seq HRAS-SCT HRAS chr11 532631 - SCT chr11 626530 - Exonic hg19 BRCA TCGA-A1-A0SK-01A 4 18 3'UTR-CDS Intra-chr p15.5 Oncogene Seq+ 22705 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L2-SPHKAP DIS3L2 chr2 233164829 + SPHKAP chr2 228996801 - Exonic hg19 BRCA TCGA-A1-A0SK-01A 3 18 In-Frame Intra-chr q37.1 q36.3 Seq+ 22706 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB7A-APBA3 ZBTB7A chr19 4066680 - APBA3 chr19 3760299 - Exonic hg19 BRCA TCGA-A1-A0SK-01A 3 16 5'UTR-5'UTR Intra-chr p13.3 Transcription factor p13.3 Seq+ 22707 ChimerSeq STARFusion TCGA_RNA-Seq OBSCN-IGSF21 OBSCN chr1 228402799 + IGSF21 chr1 18554392 + Exonic hg19 BRCA TCGA-A1-A0SK-01A 2 7 In-Frame Intra-chr q42.13 p36.13 Seq+ 22708 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 BRCA TCGA-A1-A0SK-01A 2 5 CDS-5'UTR Intra-chr q23 Seq+ 22709 ChimerSeq STARFusion TCGA_RNA-Seq FRMD4A-SUV39H2 FRMD4A chr10 13701323 - SUV39H2 chr10 14944405 + Exonic hg19 BRCA TCGA-A1-A0SK-01A 2 0 Out-of-frame Intra-chr p13 p13 22710 ChimerSeq STARFusion TCGA_RNA-Seq TIAM1-INPP5B TIAM1 chr21 32711558 - INPP5B chr1 38357126 - Exonic hg19 BRCA TCGA-A1-A0SK-01A 2 0 5'UTR-CDS Inter-chr q22.11 p34.3 22711 ChimerSeq STARFusion TCGA_RNA-Seq ST8SIA6-LOC100507217 ST8SIA6 chr10 17401513 - LOC100507217 chr15 93428745 + Exonic hg19 BRCA TCGA-AO-A125-01A 2 0 CDS-5'UTR Inter-chr p12.33 22712 ChimerSeq STARFusion TCGA_RNA-Seq RAB7A-RPN1 RAB7A chr3 128445202 + RPN1 chr3 128363826 - Exonic hg19 BRCA TCGA-D8-A1JU-01A 3 1 5'UTR-CDS Intra-chr q21.3 Tumor suppressor gene q21.3 22713 ChimerSeq STARFusion TCGA_RNA-Seq SETD5-ATG7 SETD5 chr3 9506356 + ATG7 chr3 11596285 + Exonic hg19 BRCA TCGA-EW-A6SA-01A 40 108 In-Frame Intra-chr p25.3 p25.3 Seq+ 22714 ChimerSeq STARFusion TCGA_RNA-Seq MRPL23-LOC100507412 MRPL23 chr11 1974085 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-EW-A6SA-01A 19 68 CDS-5'UTR Inter-chr p15.5 22715 ChimerSeq STARFusion TCGA_RNA-Seq MRPL23-LOC100507412 MRPL23 chr11 1974085 + LOC100507412 chrUn_gl000220 121829 + Exonic hg19 BRCA TCGA-EW-A6SA-01A 4 68 CDS-5'UTR Inter-chr p15.5 22716 ChimerSeq STARFusion TCGA_RNA-Seq CCT8-LHX4 CCT8 chr21 30432862 - LHX4 chr1 180217420 + Exonic hg19 BRCA TCGA-EW-A6SA-01A 8 28 Out-of-frame Inter-chr q21.3 q25.2 Tumor suppressor gene Transcription factor Seq+ 22717 ChimerSeq STARFusion TCGA_RNA-Seq CRIP2-SERINC2 CRIP2 chr14 105941242 + SERINC2 chr1 31905814 + Exonic hg19 BRCA TCGA-EW-A6SA-01A 3 18 Out-of-frame Inter-chr q32.33 p35.2 Seq+ 22718 ChimerSeq STARFusion TCGA_RNA-Seq KCNH1-LPGAT1 KCNH1 chr1 211192206 - LPGAT1 chr1 212002665 - Exonic hg19 BRCA TCGA-EW-A6SA-01A 4 13 CDS-5'UTR Intra-chr q32.3 Seq+ 22719 ChimerSeq STARFusion TCGA_RNA-Seq DBNDD1-CRIP2 DBNDD1 chr16 90075192 - CRIP2 chr14 105944603 + Exonic hg19 BRCA TCGA-EW-A6SA-01A 2 13 In-Frame Inter-chr q24.3 q32.33 Seq+ 22720 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-CRIP2 SBNO2 chr19 1149368 - CRIP2 chr14 105944603 + Exonic hg19 BRCA TCGA-EW-A6SA-01A 3 7 Out-of-frame Inter-chr p13.3 q32.33 Seq+ 22721 ChimerSeq STARFusion TCGA_RNA-Seq STXBP2-TPGS1 STXBP2 chr19 7708131 + TPGS1 chr19 518889 + Exonic hg19 BRCA TCGA-EW-A6SA-01A 2 2 Out-of-frame Intra-chr p13.2 p13.3 22722 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2-RFX8 NOTCH2 chr1 120611948 - RFX8 chr2 102083362 - Exonic hg19 BRCA TCGA-EW-A6SA-01A 2 1 CDS-5'UTR Inter-chr p12 Oncogene Tumor suppressor gene q11.2 Transcription factor 22723 ChimerSeq STARFusion TCGA_RNA-Seq FAM192A-C16orf62 FAM192A chr16 57219943 - C16orf62 chr16 19663298 + Exonic hg19 BRCA TCGA-BH-A0RX-01A 4 12 5'UTR-CDS Intra-chr q13 p12.3 Seq+ 22724 ChimerSeq STARFusion TCGA_RNA-Seq RPS27A-MS4A4A RPS27A chr2 55462098 + MS4A4A chr11 60064670 + Exonic hg19 BRCA TCGA-BH-A0RX-01A 2 17 In-Frame Inter-chr p16.1 q12.2 Seq+ 22725 ChimerSeq STARFusion TCGA_RNA-Seq FAM192A-C16orf62 FAM192A chr16 57219733 - C16orf62 chr16 19663298 + Exonic hg19 BRCA TCGA-BH-A0RX-01A 2 12 5'UTR-CDS Intra-chr q13 p12.3 Seq+ 22726 ChimerSeq STARFusion TCGA_RNA-Seq LTBP1-TTC27 LTBP1 chr2 33413918 + TTC27 chr2 32983359 + Exonic hg19 BRCA TCGA-BH-A0RX-01A 2 3 In-Frame Intra-chr p22.3 p22.3 Seq+ 22727 ChimerSeq STARFusion TCGA_RNA-Seq HPCAL1-YWHAQ HPCAL1 chr2 10443303 + YWHAQ chr2 9731644 - Exonic hg19 BRCA TCGA-BH-A0RX-01A 2 0 5'UTR-CDS Intra-chr p25.1 p25.1 22728 ChimerSeq STARFusion TCGA_RNA-Seq RARA-TSPYL4 RARA chr17 38487648 + TSPYL4 chr6 116571581 - Exonic hg19 BRCA TCGA-EW-A6S9-01A 10 92 CDS-3'UTR Inter-chr q21.2 Oncogene Transcription factor q22.1 Seq+ 22729 ChimerSeq STARFusion TCGA_RNA-Seq RARA-COL10A1 RARA chr17 38487648 + COL10A1 chr6 116446670 - Exonic hg19 BRCA TCGA-EW-A6S9-01A 18 54 CDS-5'UTR Inter-chr q21.2 Oncogene Transcription factor q22.1 Seq+ 22730 ChimerSeq STARFusion TCGA_RNA-Seq CDK12-JAK2 CDK12 chr17 37628016 + JAK2 chr9 5126333 + Exonic hg19 BRCA TCGA-EW-A6S9-01A 19 45 Out-of-frame Inter-chr q12 Oncogene p24.1 TK:JakA Oncogene Seq+ 22731 ChimerSeq STARFusion TCGA_RNA-Seq KDM4C-ARMC2 KDM4C chr9 6893232 + ARMC2 chr6 109220897 + Exonic hg19 BRCA TCGA-EW-A6S9-01A 4 19 Out-of-frame Inter-chr p24.1 q21 Seq+ 22732 ChimerSeq STARFusion TCGA_RNA-Seq ATG5-AK9 ATG5 chr6 106696025 - AK9 chr6 109980616 - Exonic hg19 BRCA TCGA-EW-A6S9-01A 3 21 Out-of-frame Intra-chr q21 q21 Seq+ 22733 ChimerSeq STARFusion TCGA_RNA-Seq LINC00993-TACC1P1 LINC00993 chr10 37635757 + TACC1P1 chr10 37811939 + Exonic hg19 BRCA TCGA-EW-A6S9-01A 7 5 Out-of-frame Intra-chr p11.21 p11.21 22734 ChimerSeq STARFusion TCGA_RNA-Seq KDM4C-ARMC2 KDM4C chr9 6893232 + ARMC2 chr6 109232102 + Exonic hg19 BRCA TCGA-EW-A6S9-01A 2 19 In-Frame Inter-chr p24.1 q21 Seq+ 22735 ChimerSeq STARFusion TCGA_RNA-Seq MTAP-CD24P4 MTAP chr9 21866841 + CD24P4 chrY 21154526 - Exonic hg19 BRCA TCGA-EW-A6S9-01A 3 13 Out-of-frame Inter-chr p21.3 Tumor suppressor gene q11.222 22736 ChimerSeq STARFusion TCGA_RNA-Seq PIP4K2B-KPNB1 PIP4K2B chr17 36923821 - KPNB1 chr17 45757386 + Exonic hg19 BRCA TCGA-BH-A1F2-01A 181 631 3'UTR-CDS Intra-chr q12 q21.32 Seq+ 22737 ChimerSeq STARFusion TCGA_RNA-Seq DCK-GRSF1 DCK chr4 71863899 + GRSF1 chr4 71702031 - Exonic hg19 BRCA TCGA-BH-A1F2-01A 10 49 In-Frame Intra-chr q13.3 q13.3 Seq+ 22738 ChimerSeq STARFusion TCGA_RNA-Seq ADNP2-PQLC1 ADNP2 chr18 77875533 + PQLC1 chr18 77703462 - Exonic hg19 BRCA TCGA-BH-A1F2-01A 5 23 Out-of-frame Intra-chr q23 Transcription factor q23 Seq+ 22739 ChimerSeq STARFusion TCGA_RNA-Seq TEX2-GDPD1 TEX2 chr17 62340528 - GDPD1 chr17 57322775 + Exonic hg19 BRCA TCGA-BH-A1F2-01A 5 9 5'UTR-CDS Intra-chr q23.3 q22 Seq+ 22740 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPA2B1-FN1 HNRNPA2B1 chr7 26237261 - FN1 chr2 216226182 - Exonic hg19 BRCA TCGA-BH-A1F2-01A 3 1 Out-of-frame Inter-chr p15.2 q35 Oncogene 22741 ChimerSeq STARFusion TCGA_RNA-Seq NR2F2-PSPC1 NR2F2 chr15 96869581 + PSPC1 chr13 20251963 - Exonic hg19 BRCA TCGA-BH-A1F2-01A 2 1 CDS-3'UTR Inter-chr q26.2 Transcription factor q12.11 22742 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-SKAP1 TAOK1 chr17 27816775 + SKAP1 chr17 46266862 - Exonic hg19 BRCA TCGA-BH-A1F2-01A 2 0 Out-of-frame Intra-chr q11.2 q21.32 22743 ChimerSeq STARFusion TCGA_RNA-Seq LRP1-STAT2 LRP1 chr12 57587795 + STAT2 chr12 56740408 - Exonic hg19 BRCA TCGA-AR-A24T-01A 2 0 In-Frame Intra-chr q13.3 q13.3 Transcription factor 22744 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-EFCAB3 RPS6KB1 chr17 57970686 + EFCAB3 chr17 60460324 + Exonic hg19 BRCA TCGA-AN-A0FD-01A 16 35 Out-of-frame Intra-chr q23.1 Oncogene q23.2 Seq+ 22745 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-FAM129C CLTC chr17 57697534 + FAM129C chr19 17648185 + Exonic hg19 BRCA TCGA-AN-A0FD-01A 8 47 Out-of-frame Inter-chr q23.1 p13.11 Seq+ 22746 ChimerSeq STARFusion TCGA_RNA-Seq YWHAZ-SCAF11 YWHAZ chr8 101960824 - SCAF11 chr12 46345510 - Exonic hg19 BRCA TCGA-AN-A0FD-01A 8 22 In-Frame Inter-chr q22.3 q12 Seq+ 22747 ChimerSeq STARFusion TCGA_RNA-Seq TPM4-INTS2 TPM4 chr19 16187507 + INTS2 chr17 59952399 - Exonic hg19 BRCA TCGA-AN-A0FD-01A 8 18 Out-of-frame Inter-chr p13.12 q23.2 Seq+ 22748 ChimerSeq STARFusion TCGA_RNA-Seq RPL18A-HELZ RPL18A chr19 17973032 + HELZ chr17 65142006 - Exonic hg19 BRCA TCGA-AN-A0FD-01A 4 18 Out-of-frame Inter-chr p13.11 q24.2 Seq+ 22749 ChimerSeq STARFusion TCGA_RNA-Seq TMEM59L-GGNBP2 TMEM59L chr19 18731383 + GGNBP2 chr17 34937793 + Exonic hg19 BRCA TCGA-AN-A0FD-01A 5 10 Out-of-frame Inter-chr p13.11 Tumor suppressor gene Seq+ 22750 ChimerSeq STARFusion TCGA_RNA-Seq TPM4-INTS2 TPM4 chr19 16186982 + INTS2 chr17 59952399 - Exonic hg19 BRCA TCGA-AN-A0FD-01A 3 18 Out-of-frame Inter-chr p13.12 q23.2 Seq+ 22751 ChimerSeq STARFusion TCGA_RNA-Seq MSI2-RAD51C MSI2 chr17 55339553 + RAD51C chr17 56772292 + Exonic hg19 BRCA TCGA-AN-A0FD-01A 4 13 Out-of-frame Intra-chr q22 q22 Tumor suppressor gene Seq+ 22752 ChimerSeq STARFusion TCGA_RNA-Seq ZFYVE21-IGH@ ZFYVE21 chr14 104182316 + IGH@ chr14 106926495 - Exonic hg19 BRCA TCGA-AN-A0FD-01A 3 8 Out-of-frame Intra-chr q32.33 32.33 22753 ChimerSeq STARFusion TCGA_RNA-Seq PRKDC-CEP290 PRKDC chr8 48744375 - CEP290 chr12 88533341 - Exonic hg19 BRCA TCGA-AN-A0FD-01A 3 5 Out-of-frame Inter-chr q11.21 Oncogene q21.32 Seq+ 22754 ChimerSeq STARFusion TCGA_RNA-Seq PSMD12-KIAA2022 PSMD12 chr17 65362528 - KIAA2022 chrX 73965532 - Exonic hg19 BRCA TCGA-AN-A0FD-01A 3 5 CDS-5'UTR Inter-chr q24.2 q13.3 Seq+ 22755 ChimerSeq STARFusion TCGA_RNA-Seq RNF169-ANAPC15 RNF169 chr11 74500744 + ANAPC15 chr11 71822542 - Exonic hg19 BRCA TCGA-EW-A423-01A 3 6 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 22756 ChimerSeq STARFusion TCGA_RNA-Seq ST7-LOC100507412 ST7 chr7 116593745 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-AC-A2QH-01A 21 120 CDS-5'UTR Inter-chr q31.2 Tumor suppressor gene 22757 ChimerSeq STARFusion TCGA_RNA-Seq SREBF1-LRRC48 SREBF1 chr17 17740041 - LRRC48 chr17 17877166 + Exonic hg19 BRCA TCGA-AC-A2QH-01A 5 13 CDS-5'UTR Intra-chr p11.2 Transcription factor Seq+ 22758 ChimerSeq STARFusion TCGA_RNA-Seq COG5-FOXP2 COG5 chr7 107167682 - FOXP2 chr7 114329837 + Exonic hg19 BRCA TCGA-AC-A2QH-01A 5 4 Out-of-frame Intra-chr q31.1 Transcription factor Seq+ 22759 ChimerSeq STARFusion TCGA_RNA-Seq CUX1-LOC100507412 CUX1 chr7 101559505 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-AC-A2QH-01A 2 1 CDS-5'UTR Inter-chr q22.1 Tumor suppressor gene Transcription factor 22760 ChimerSeq STARFusion TCGA_RNA-Seq STK38L-MRPS35 STK38L chr12 27455121 + MRPS35 chr12 27908114 + Exonic hg19 BRCA TCGA-AC-A2QH-01A 2 1 In-Frame Intra-chr p11.23 p11.22 22761 ChimerSeq STARFusion TCGA_RNA-Seq RPL5-TRMU RPL5 chr1 93297674 + TRMU chr22 46752739 + Exonic hg19 BRCA TCGA-E2-A572-01A 2 2 In-Frame Inter-chr p22.1 Tumor suppressor gene q13.31 22762 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119584887 - TBX15 chr1 119474455 - Exonic hg19 BRCA TCGA-AO-A12B-01A 2 1 CDS-5'UTR Intra-chr p12 p12 Transcription factor 22763 ChimerSeq STARFusion TCGA_RNA-Seq ARID1B-NKAIN2 ARID1B chr6 157256710 + NKAIN2 chr6 124979332 + Exonic hg19 BRCA TCGA-E2-A1LK-01A 10 46 In-Frame Intra-chr q25.3 Oncogene q22.31 Seq+ 22764 ChimerSeq STARFusion TCGA_RNA-Seq BOC-WDR52 BOC chr3 112969680 + WDR52 chr3 113027115 - Exonic hg19 BRCA TCGA-E2-A1LK-01A 5 26 In-Frame Intra-chr q13.2 22765 ChimerSeq STARFusion TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104654982 + LHFPL3 chr7 104546634 + Exonic hg19 BRCA TCGA-E2-A1LK-01A 5 11 5'UTR-CDS Intra-chr q22.2 Seq+ 22766 ChimerSeq STARFusion TCGA_RNA-Seq KIN-ITIH5 KIN chr10 7825044 - ITIH5 chr10 7611747 - Exonic hg19 BRCA TCGA-E2-A1LK-01A 2 13 Out-of-frame Intra-chr p14 Transcription factor p14 Seq+ 22767 ChimerSeq STARFusion TCGA_RNA-Seq CDC42BPA-EPRS CDC42BPA chr1 227203781 - EPRS chr1 220180680 - Exonic hg19 BRCA TCGA-E2-A1LK-01A 3 6 In-Frame Intra-chr q42.13 q41 Seq+ 22768 ChimerSeq STARFusion TCGA_RNA-Seq EPHX1-USH2A EPHX1 chr1 225997871 + USH2A chr1 216465712 - Exonic hg19 BRCA TCGA-E2-A1LK-01A 2 0 5'UTR-CDS Intra-chr q42.12 q41 22769 ChimerSeq STARFusion TCGA_RNA-Seq THSD4-ALDH1A2 THSD4 chr15 71704162 + ALDH1A2 chr15 58306479 - Exonic hg19 BRCA TCGA-AO-A03P-01A 44 239 In-Frame Intra-chr q23 q21.3 Tumor suppressor gene Seq+ 22770 ChimerSeq STARFusion TCGA_RNA-Seq RAB27A-SQRDL RAB27A chr15 55562363 - SQRDL chr15 45968299 + Exonic hg19 BRCA TCGA-AO-A03P-01A 36 75 5'UTR-CDS Intra-chr q21.3 Seq+ 22771 ChimerSeq STARFusion TCGA_RNA-Seq VPS37C-SLC3A2 VPS37C chr11 60928863 - SLC3A2 chr11 62651929 + Exonic hg19 BRCA TCGA-AO-A03P-01A 29 76 5'UTR-5'UTR Intra-chr q12.2 q12.3 Seq+ 22772 ChimerSeq STARFusion TCGA_RNA-Seq MICU1-TSPAN3 MICU1 chr10 74293504 - TSPAN3 chr15 77348597 - Exonic hg19 BRCA TCGA-AO-A03P-01A 18 36 In-Frame Inter-chr q22.1 q24.3 Seq+ 22773 ChimerSeq STARFusion TCGA_RNA-Seq RAB27A-SQRDL RAB27A chr15 55562363 - SQRDL chr15 45974676 + Exonic hg19 BRCA TCGA-AO-A03P-01A 8 75 5'UTR-CDS Intra-chr q21.3 Seq+ 22774 ChimerSeq STARFusion TCGA_RNA-Seq VPS37C-SLC3A2 VPS37C chr11 60928553 - SLC3A2 chr11 62651929 + Exonic hg19 BRCA TCGA-AO-A03P-01A 5 74 5'UTR-5'UTR Intra-chr q12.2 q12.3 Seq+ 22775 ChimerSeq STARFusion TCGA_RNA-Seq NARG2-CIB1 NARG2 chr15 60734615 - CIB1 chr15 90776935 - Exonic hg19 BRCA TCGA-AO-A03P-01A 7 62 Out-of-frame Intra-chr q26.1 Seq+ 22776 ChimerSeq STARFusion TCGA_RNA-Seq VPS37C-SLC3A2 VPS37C chr11 60928553 - SLC3A2 chr11 62651461 + Exonic hg19 BRCA TCGA-AO-A03P-01A 4 74 5'UTR-5'UTR Intra-chr q12.2 q12.3 Seq+ 22777 ChimerSeq STARFusion TCGA_RNA-Seq ZNF564-WIZ ZNF564 chr19 12662144 - WIZ chr19 15538344 - Exonic hg19 BRCA TCGA-AO-A03P-01A 13 38 Out-of-frame Intra-chr p13.2 Transcription factor p13.12 Transcription factor Seq+ 22778 ChimerSeq STARFusion TCGA_RNA-Seq ADK-TTC23 ADK chr10 75936644 + TTC23 chr15 99768937 - Exonic hg19 BRCA TCGA-AO-A03P-01A 9 36 CDS-5'UTR Inter-chr q22.2 q26.3 Seq+ 22779 ChimerSeq STARFusion TCGA_RNA-Seq FAM149B1-KCNMA1 FAM149B1 chr10 74970196 + KCNMA1 chr10 78778857 - Exonic hg19 BRCA TCGA-AO-A03P-01A 10 29 Out-of-frame Intra-chr q22.2 q22.3 Seq+ 22780 ChimerSeq STARFusion TCGA_RNA-Seq ZSCAN29-MGMT ZSCAN29 chr15 43661794 - MGMT chr10 131506159 + Exonic hg19 BRCA TCGA-AO-A03P-01A 10 25 Out-of-frame Inter-chr q15.3 Transcription factor q26.3 Seq+ 22781 ChimerSeq STARFusion TCGA_RNA-Seq NARG2-CIB1 NARG2 chr15 60734615 - CIB1 chr15 90775559 - Exonic hg19 BRCA TCGA-AO-A03P-01A 2 56 Out-of-frame Intra-chr q26.1 Seq+ 22782 ChimerSeq STARFusion TCGA_RNA-Seq PBLD-LRRC28 PBLD chr10 70048240 - LRRC28 chr15 99796103 + Exonic hg19 BRCA TCGA-AO-A03P-01A 9 23 CDS-5'UTR Inter-chr q21.3 q26.3 Seq+ 22783 ChimerSeq STARFusion TCGA_RNA-Seq USP8-TRPM7 USP8 chr15 50716711 + TRPM7 chr15 50875356 - Exonic hg19 BRCA TCGA-AO-A03P-01A 4 29 5'UTR-CDS Intra-chr q21.2 q21.2 Seq+ 22784 ChimerSeq STARFusion TCGA_RNA-Seq USP8-TRPM7 USP8 chr15 50716711 + TRPM7 chr15 50878685 - Exonic hg19 BRCA TCGA-AO-A03P-01A 4 28 5'UTR-CDS Intra-chr q21.2 q21.2 Seq+ 22785 ChimerSeq STARFusion TCGA_RNA-Seq INPP5A-FAM149B1 INPP5A chr10 134563349 + FAM149B1 chr10 74999070 + Exonic hg19 BRCA TCGA-AO-A03P-01A 6 18 In-Frame Intra-chr q26.3 q22.2 Seq+ 22786 ChimerSeq STARFusion TCGA_RNA-Seq USP8-TRPM7 USP8 chr15 50716711 + TRPM7 chr15 50875353 - Exonic hg19 BRCA TCGA-AO-A03P-01A 3 28 5'UTR-CDS Intra-chr q21.2 q21.2 Seq+ 22787 ChimerSeq STARFusion TCGA_RNA-Seq GRID1-PGPEP1L GRID1 chr10 87898576 - PGPEP1L chr15 99514387 - Exonic hg19 BRCA TCGA-AO-A03P-01A 4 22 In-Frame Inter-chr q23.2 q26.3 Seq+ 22788 ChimerSeq STARFusion TCGA_RNA-Seq SPG11-CAMK2G SPG11 chr15 44865745 - CAMK2G chr10 75613004 - Exonic hg19 BRCA TCGA-AO-A03P-01A 4 22 In-Frame Inter-chr q21.1 q22.2 Seq+ 22789 ChimerSeq STARFusion TCGA_RNA-Seq GALK2-NAPSA GALK2 chr15 49531564 + NAPSA chr19 50865570 - Exonic hg19 BRCA TCGA-AO-A03P-01A 3 15 Out-of-frame Inter-chr q21.1 q13.33 Seq+ 22790 ChimerSeq STARFusion TCGA_RNA-Seq KAT6A-IKBKB KAT6A chr8 41905896 - IKBKB chr8 42162705 + Exonic hg19 BRCA TCGA-AO-A03P-01A 3 10 Out-of-frame Intra-chr p11.21 Oncogene p11.21 Oncogene Seq+ 22791 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL2-PLD1 OSBPL2 chr20 60838747 + PLD1 chr3 171338310 - Exonic hg19 BRCA TCGA-AO-A03P-01A 3 10 Out-of-frame Inter-chr q13.33 q26.31 Tumor suppressor gene Seq+ 22792 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3B-NLGN1 FNDC3B chr3 171944737 + NLGN1 chr3 173993105 + Exonic hg19 BRCA TCGA-AO-A03P-01A 2 8 Out-of-frame Intra-chr q26.31 q26.31 Seq+ 22793 ChimerSeq STARFusion TCGA_RNA-Seq EYA3-SYTL1 EYA3 chr1 28362055 - SYTL1 chr1 27675571 + Exonic hg19 BRCA TCGA-BH-A0B4-01A 3 11 Out-of-frame Intra-chr p35.3 p36.11 Seq+ 22794 ChimerSeq STARFusion TCGA_RNA-Seq LOC100288778-WASH3P LOC100288778 chr12 89017 + WASH3P chr15 102515209 + Exonic hg19 BRCA TCGA-C8-A12Y-01A 3 12 Out-of-frame Inter-chr q26.3 22795 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-AEBP1 MAP4 chr3 47912436 - AEBP1 chr7 44153509 + Exonic hg19 BRCA TCGA-C8-A12Y-01A 3 0 Out-of-frame Inter-chr p21.31 p13 Transcription factor 22796 ChimerSeq STARFusion TCGA_RNA-Seq ABCA11P-FASN ABCA11P chr4 467770 - FASN chr17 80039719 - Exonic hg19 BRCA TCGA-C8-A12Y-01A 2 1 3'UTR-CDS Inter-chr p16.3 q25.3 22797 ChimerSeq STARFusion TCGA_RNA-Seq SLC11A2-GLUL SLC11A2 chr12 51420093 - GLUL chr1 182357885 - Exonic hg19 BRCA TCGA-C8-A12Y-01A 2 1 5'UTR-5'UTR Inter-chr q13.12 q25.3 22798 ChimerSeq STARFusion TCGA_RNA-Seq LAMA5-UBN1 LAMA5 chr20 60937456 - UBN1 chr16 4918834 + Exonic hg19 BRCA TCGA-D8-A27F-01A 51 85 In-Frame Inter-chr q13.33 p13.3 Seq+ 22799 ChimerSeq STARFusion TCGA_RNA-Seq UGDH-SMIM14 UGDH chr4 39512243 - SMIM14 chr4 39551814 - Exonic hg19 BRCA TCGA-D8-A27F-01A 28 168 Out-of-frame Intra-chr p14 p14 22800 ChimerSeq STARFusion TCGA_RNA-Seq ELMSAN1-ENTPD5 ELMSAN1 chr14 74193631 - ENTPD5 chr14 74428062 - Exonic hg19 BRCA TCGA-D8-A27F-01A 40 90 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 22801 ChimerSeq STARFusion TCGA_RNA-Seq SKI-KCNT2 SKI chr1 2161174 + KCNT2 chr1 196461471 - Exonic hg19 BRCA TCGA-D8-A27F-01A 3 22 Out-of-frame Intra-chr p36.33 Transcription factor q31.3 Seq+ 22802 ChimerSeq STARFusion TCGA_RNA-Seq SORL1-TECTA SORL1 chr11 121403261 + TECTA chr11 121058541 + Exonic hg19 BRCA TCGA-E9-A22G-01A 128 345 In-Frame Intra-chr q24.1 q23.3 Seq+ 22803 ChimerSeq STARFusion TCGA_RNA-Seq NUP214-AIF1L NUP214 chr9 134006223 + AIF1L chr9 133986984 + Exonic hg19 BRCA TCGA-E9-A22G-01A 103 310 In-Frame Intra-chr q34.13 Oncogene q34.12 Seq+ 22804 ChimerSeq STARFusion TCGA_RNA-Seq SNORD23-GLTSCR2 SNORD23 chr19 48259185 + GLTSCR2 chr19 48250223 + Exonic hg19 BRCA TCGA-E9-A22G-01A 70 368 Out-of-frame Intra-chr q13.33 Tumor suppressor gene 22805 ChimerSeq STARFusion TCGA_RNA-Seq LDLRAD3-CD44 LDLRAD3 chr11 35965694 + CD44 chr11 35198122 + Exonic hg19 BRCA TCGA-E9-A22G-01A 29 24 In-Frame Intra-chr p13 p13 Oncogene Tumor suppressor gene Seq+ 22806 ChimerSeq STARFusion TCGA_RNA-Seq POLR1B-TTL POLR1B chr2 113317151 + TTL chr2 113289735 + Exonic hg19 BRCA TCGA-E9-A22G-01A 15 34 CDS-5'UTR Intra-chr q14.1 q14.1 22807 ChimerSeq STARFusion TCGA_RNA-Seq POLR1B-TTL POLR1B chr2 113310393 + TTL chr2 113289735 + Exonic hg19 BRCA TCGA-E9-A22G-01A 3 34 CDS-5'UTR Intra-chr q14.1 q14.1 22808 ChimerSeq STARFusion TCGA_RNA-Seq GRB10-SLC2A13 GRB10 chr7 50771518 - SLC2A13 chr12 40154054 - Exonic hg19 BRCA TCGA-E9-A22G-01A 6 10 In-Frame Inter-chr p12.1 q12 Seq+ 22809 ChimerSeq STARFusion TCGA_RNA-Seq GABRG3-OCA2 GABRG3 chr15 27271968 + OCA2 chr15 28211968 - Exonic hg19 BRCA TCGA-E9-A22G-01A 2 4 In-Frame Intra-chr q12 q13.1 Seq+ 22810 ChimerSeq STARFusion TCGA_RNA-Seq NXN-ABR NXN chr17 882559 - ABR chr17 916404 - Exonic hg19 BRCA TCGA-E9-A22G-01A 2 3 In-Frame Intra-chr p13.3 p13.3 Seq+ 22811 ChimerSeq STARFusion TCGA_RNA-Seq PLEC-CYHR1 PLEC chr8 145000952 - CYHR1 chr8 145676153 - Exonic hg19 BRCA TCGA-E9-A22G-01A 2 1 Out-of-frame Intra-chr q24.3 q24.3 22812 ChimerSeq STARFusion TCGA_RNA-Seq PELI1-KRT8 PELI1 chr2 64335374 - KRT8 chr12 53293849 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 63 326 Out-of-frame Inter-chr p14 q13.13 Seq+ 22813 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G1-ABCF3 EIF4G1 chr3 184052622 + ABCF3 chr3 183910890 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 59 173 Out-of-frame Intra-chr q27.1 q27.1 Seq+ 22814 ChimerSeq STARFusion TCGA_RNA-Seq NSD1-CDH23 NSD1 chr5 176563031 + CDH23 chr10 73434869 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 28 60 In-Frame Inter-chr q35.3 Oncogene q22.1 Seq+ 22815 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-MYC PVT1 chr8 128806980 + MYC chr8 128752642 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 20 72 5'UTR-CDS Intra-chr q24.21 q24.21 Oncogene Transcription factor KB Pub Seq+ 22816 ChimerSeq STARFusion TCGA_RNA-Seq PIM3-CRELD2 PIM3 chr22 50355459 + CRELD2 chr22 50320903 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 20 48 In-Frame Intra-chr q13.33 CAMK:PIM q13.33 Seq+ 22817 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-EIF3D MYH9 chr22 36737415 - EIF3D chr22 36907833 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 16 53 Out-of-frame Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 KB Pub Seq+ 22818 ChimerSeq STARFusion TCGA_RNA-Seq MYO9B-DDA1 MYO9B chr19 17213367 + DDA1 chr19 17424832 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 12 53 In-Frame Intra-chr p13.11 p13.11 Seq+ 22819 ChimerSeq STARFusion TCGA_RNA-Seq VDAC1-SKP1 VDAC1 chr5 133340338 - SKP1 chr5 133509713 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 17 17 3'UTR-5'UTR Intra-chr q31.1 q31.1 Seq+ 22820 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-MYC PVT1 chr8 128808254 + MYC chr8 128752642 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 2 72 5'UTR-CDS Intra-chr q24.21 q24.21 Oncogene Transcription factor KB Pub Seq+ 22821 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G3-RAP1GAP EIF4G3 chr1 21329206 - RAP1GAP chr1 21945565 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 8 40 In-Frame Intra-chr p36.12 p36.12 Tumor suppressor gene Seq+ 22822 ChimerSeq STARFusion TCGA_RNA-Seq GRB2-ACOX1 GRB2 chr17 73389632 - ACOX1 chr17 73949701 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 7 36 In-Frame Intra-chr q25.1 q25.1 Seq+ 22823 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G3-RAP1GAP EIF4G3 chr1 21329206 - RAP1GAP chr1 21940582 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 4 39 In-Frame Intra-chr p36.12 p36.12 Tumor suppressor gene Seq+ 22824 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-MROH5 PTK2 chr8 141696731 - MROH5 chr8 142490548 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 8 23 Out-of-frame Intra-chr q24.3 22825 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G3-RAP1GAP EIF4G3 chr1 21324094 - RAP1GAP chr1 21945565 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 2 39 In-Frame Intra-chr p36.12 p36.12 Tumor suppressor gene Seq+ 22826 ChimerSeq STARFusion TCGA_RNA-Seq GRB2-ACOX1 GRB2 chr17 73389632 - ACOX1 chr17 73947658 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 2 36 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 22827 ChimerSeq STARFusion TCGA_RNA-Seq IL12RB2-PDE4B IL12RB2 chr1 67796493 + PDE4B chr1 66837996 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 7 15 Out-of-frame Intra-chr p31.3 p31.3 Seq+ 22828 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-CCDC146 PTPN12 chr7 77200503 + CCDC146 chr7 76796975 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 5 10 5'UTR-5'UTR Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 22829 ChimerSeq STARFusion TCGA_RNA-Seq FAM83D-SF3B3 FAM83D chr20 37570769 + SF3B3 chr16 70597779 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 2 21 Out-of-frame Inter-chr q11.23 q22.1 Seq+ 22830 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN14-DYDC2 TSPAN14 chr10 82249070 + DYDC2 chr10 82122191 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 2 20 CDS-5'UTR Intra-chr q23.1 q23.1 Seq+ 22831 ChimerSeq STARFusion TCGA_RNA-Seq CTPS2-RBBP7 CTPS2 chrX 16685637 - RBBP7 chrX 16867424 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 3 15 Out-of-frame Intra-chr p22.2 p22.2 Tumor suppressor gene Seq+ 22832 ChimerSeq STARFusion TCGA_RNA-Seq KCNC4-GSTM4 KCNC4 chr1 110768800 + GSTM4 chr1 110207633 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 2 16 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 22833 ChimerSeq STARFusion TCGA_RNA-Seq PACSIN2-NUPL2 PACSIN2 chr22 43308027 - NUPL2 chr7 23224689 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 2 16 Out-of-frame Inter-chr q13.2 p15.3 Seq+ 22834 ChimerSeq STARFusion TCGA_RNA-Seq SYNPO2-TRIM24 SYNPO2 chr4 119810296 + TRIM24 chr7 138252226 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 4 8 In-Frame Inter-chr q26 Tumor suppressor gene q33 Oncogene Tumor suppressor gene Seq+ 22835 ChimerSeq STARFusion TCGA_RNA-Seq CTDSPL-TMCC1 CTDSPL chr3 38012990 + TMCC1 chr3 129390107 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 5 3 In-Frame Intra-chr p22.2 Tumor suppressor gene q22.1 Seq+ 22836 ChimerSeq STARFusion TCGA_RNA-Seq HDGF-RRNAD1 HDGF chr1 156714800 - RRNAD1 chr1 156706424 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 3 10 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 22837 ChimerSeq STARFusion TCGA_RNA-Seq GALNT14-FAM98A GALNT14 chr2 31360824 - FAM98A chr2 33820704 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 2 11 Out-of-frame Intra-chr p23.1 p22.3 Seq+ 22838 ChimerSeq STARFusion TCGA_RNA-Seq DNMT1-ICAM3 DNMT1 chr19 10283766 - ICAM3 chr19 10446652 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 2 8 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene Transcription factor p13.2 Seq+ 22839 ChimerSeq STARFusion TCGA_RNA-Seq UBR4-HSPG2 UBR4 chr1 19495929 - HSPG2 chr1 22170792 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 2 8 Out-of-frame Intra-chr p36.13 p36.12 Seq+ 22840 ChimerSeq STARFusion TCGA_RNA-Seq ASXL2-KIF3C ASXL2 chr2 26101035 - KIF3C chr2 26179313 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 2 6 In-Frame Intra-chr p23.3 p23.3 Seq+ 22841 ChimerSeq STARFusion TCGA_RNA-Seq SYNJ2-GTF2H5 SYNJ2 chr6 158438322 + GTF2H5 chr6 158591502 + Exonic hg19 BRCA TCGA-A7-A6VW-01A 49 173 5'UTR-5'UTR Intra-chr q25.3 q25.3 Seq+ 22842 ChimerSeq STARFusion TCGA_RNA-Seq SYNJ2-GTF2H5 SYNJ2 chr6 158438322 + GTF2H5 chr6 158613009 + Exonic hg19 BRCA TCGA-A7-A6VW-01A 33 173 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 22843 ChimerSeq STARFusion TCGA_RNA-Seq CDK13-C7orf10 CDK13 chr7 40041630 + C7orf10 chr7 40899915 + Exonic hg19 BRCA TCGA-A7-A6VW-01A 21 118 In-Frame Intra-chr p14.1 Seq+ 22844 ChimerSeq STARFusion TCGA_RNA-Seq CDK13-C7orf10 CDK13 chr7 40085624 + C7orf10 chr7 40899915 + Exonic hg19 BRCA TCGA-A7-A6VW-01A 11 118 Out-of-frame Intra-chr p14.1 Seq+ 22845 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-KISS1 RNA45S5 chrUn_gl000220 113694 + KISS1 chr1 204160109 - Exonic hg19 BRCA TCGA-A7-A6VW-01A 12 106 Out-of-frame Inter-chr q32.1 Tumor suppressor gene 22846 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-KISS1 RNA45S5 chrUn_gl000220 106452 + KISS1 chr1 204159925 - Exonic hg19 BRCA TCGA-A7-A6VW-01A 7 106 Out-of-frame Inter-chr q32.1 Tumor suppressor gene 22847 ChimerSeq STARFusion TCGA_RNA-Seq SCD5-TMEM150C SCD5 chr4 83601860 - TMEM150C chr4 83425820 - Exonic hg19 BRCA TCGA-A7-A6VW-01A 2 0 CDS-5'UTR Intra-chr q21.22 q21.22 Seq+ 22848 ChimerSeq STARFusion TCGA_RNA-Seq BAG4-LOC100130964 BAG4 chr8 38034657 + LOC100130964 chr8 39430763 + Exonic hg19 BRCA TCGA-E2-A105-01A 10 61 CDS-5'UTR Intra-chr p11.23 22849 ChimerSeq STARFusion TCGA_RNA-Seq ZGPAT-CNBD2 ZGPAT chr20 62340516 + CNBD2 chr20 34575317 + Exonic hg19 BRCA TCGA-E2-A105-01A 11 57 Out-of-frame Intra-chr q13.33 Transcription factor q11.23 Seq+ 22850 ChimerSeq STARFusion TCGA_RNA-Seq ZGPAT-CNBD2 ZGPAT chr20 62340516 + CNBD2 chr20 34582960 + Exonic hg19 BRCA TCGA-E2-A105-01A 6 57 Out-of-frame Intra-chr q13.33 Transcription factor q11.23 Seq+ 22851 ChimerSeq STARFusion TCGA_RNA-Seq ZGPAT-CNBD2 ZGPAT chr20 62340331 + CNBD2 chr20 34582960 + Exonic hg19 BRCA TCGA-E2-A105-01A 4 57 Out-of-frame Intra-chr q13.33 Transcription factor q11.23 Seq+ 22852 ChimerSeq STARFusion TCGA_RNA-Seq ADAM18-LSM1 ADAM18 chr8 39581426 + LSM1 chr8 38029551 - Exonic hg19 BRCA TCGA-E2-A105-01A 11 10 Out-of-frame Intra-chr p11.23 Seq+ 22853 ChimerSeq STARFusion TCGA_RNA-Seq CDK13-TAX1BP1 CDK13 chr7 40041630 + TAX1BP1 chr7 27867357 + Exonic hg19 BRCA TCGA-E2-A105-01A 6 18 Out-of-frame Intra-chr p14.1 p15.2 Seq+ 22854 ChimerSeq STARFusion TCGA_RNA-Seq TRIB1-SLC25A32 TRIB1 chr8 126445851 + SLC25A32 chr8 104420012 - Exonic hg19 BRCA TCGA-E2-A105-01A 6 6 Out-of-frame Intra-chr q24.13 q22.3 Seq+ 22855 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP12-DESI1 ARHGAP12 chr10 32197100 - DESI1 chr22 42003865 - Exonic hg19 BRCA TCGA-E2-A105-01A 3 9 Out-of-frame Inter-chr p11.22 q13.2 Seq+ 22856 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-THEMIS PTPRK chr6 128841404 - THEMIS chr6 128040968 - Exonic hg19 BRCA TCGA-E2-A105-01A 3 9 Out-of-frame Intra-chr Tumor suppressor gene Seq+ 22857 ChimerSeq STARFusion TCGA_RNA-Seq BBS9-DPY19L1P1 BBS9 chr7 33217203 + DPY19L1P1 chr7 32716520 - Exonic hg19 BRCA TCGA-E2-A105-01A 2 2 CDS-3'UTR Intra-chr p14.3 p14.3 22858 ChimerSeq STARFusion TCGA_RNA-Seq FAM65C-ZNF335 FAM65C chr20 49221182 - ZNF335 chr20 44579234 - Exonic hg19 BRCA TCGA-E2-A105-01A 2 2 In-Frame Intra-chr q13.12 Transcription factor Seq+ 22859 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-MYO6 RCC1 chr1 28835417 + MYO6 chr6 76582924 + Exonic hg19 BRCA TCGA-E2-A105-01A 2 1 5'UTR-CDS Inter-chr p35.3 q14.1 22860 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-TERF1 VPS13B chr8 100589861 + TERF1 chr8 73932919 + Exonic hg19 BRCA TCGA-E2-A105-01A 2 1 Out-of-frame Intra-chr q22.2 q21.11 Transcription factor Seq+ 22861 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L2-NRF1 DIS3L2 chr2 232952431 + NRF1 chr7 129297183 + Exonic hg19 BRCA TCGA-E2-A105-01A 2 0 5'UTR-5'UTR Inter-chr q37.1 q32.2 Tumor suppressor gene Transcription factor 22862 ChimerSeq STARFusion TCGA_RNA-Seq TLK2-PITPNC1 TLK2 chr17 60558567 + PITPNC1 chr17 65528918 + Exonic hg19 BRCA TCGA-D8-A27G-01A 37 130 In-Frame Intra-chr q23.2 Other:TLK q24.2 Seq+ 22863 ChimerSeq STARFusion TCGA_RNA-Seq KPNB1-SKAP1 KPNB1 chr17 45748198 + SKAP1 chr17 46239931 - Exonic hg19 BRCA TCGA-D8-A27G-01A 13 61 Out-of-frame Intra-chr q21.32 q21.32 Seq+ 22864 ChimerSeq STARFusion TCGA_RNA-Seq KPNB1-SKAP1 KPNB1 chr17 45748198 + SKAP1 chr17 46239928 - Exonic hg19 BRCA TCGA-D8-A27G-01A 4 61 Out-of-frame Intra-chr q21.32 q21.32 Seq+ 22865 ChimerSeq STARFusion TCGA_RNA-Seq XRN2-PLK1S1 XRN2 chr20 21307239 + PLK1S1 chr20 21224883 + Exonic hg19 BRCA TCGA-BH-A0BL-01A 378 586 Out-of-frame Intra-chr p11.22 22866 ChimerSeq STARFusion TCGA_RNA-Seq PRIM2-COL21A1 PRIM2 chr6 57246966 + COL21A1 chr6 55929420 - Exonic hg19 BRCA TCGA-BH-A0BL-01A 46 76 In-Frame Intra-chr p11.2 p12.1 Seq+ 22867 ChimerSeq STARFusion TCGA_RNA-Seq IGF2R-SLC22A3 IGF2R chr6 160431817 + SLC22A3 chr6 160819011 + Exonic hg19 BRCA TCGA-BH-A0BL-01A 5 28 In-Frame Intra-chr q25.3 Oncogene Tumor suppressor gene q25.3 Seq+ 22868 ChimerSeq STARFusion TCGA_RNA-Seq IGF2R-ACVR2A IGF2R chr6 160390427 + ACVR2A chr2 148672760 + Exonic hg19 BRCA TCGA-BH-A0BL-01A 10 7 Out-of-frame Inter-chr q25.3 Oncogene Tumor suppressor gene q22.3 Oncogene Seq+ 22869 ChimerSeq STARFusion TCGA_RNA-Seq RASA2-NELFB RASA2 chr3 141278837 + NELFB chr9 140157489 + Exonic hg19 BRCA TCGA-BH-A0BL-01A 8 10 Out-of-frame Inter-chr q23 q34.3 Seq+ 22870 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT3-RPS19 AGPAT3 chr21 45323900 + RPS19 chr19 42364204 + Exonic hg19 BRCA TCGA-BH-A0BL-01A 4 10 5'UTR-5'UTR Inter-chr q22.3 q13.2 Seq+ 22871 ChimerSeq STARFusion TCGA_RNA-Seq CGGBP1-SCN11A CGGBP1 chr3 88190120 - SCN11A chr3 38968422 - Exonic hg19 BRCA TCGA-BH-A0BL-01A 3 11 5'UTR-CDS Intra-chr p11.1 Transcription factor p22.2 Seq+ 22872 ChimerSeq STARFusion TCGA_RNA-Seq CDC42EP4-SDK2 CDC42EP4 chr17 71308032 - SDK2 chr17 71348776 - Exonic hg19 BRCA TCGA-AN-A04A-01A 13 17 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 22873 ChimerSeq STARFusion TCGA_RNA-Seq CDC42EP4-SDK2 CDC42EP4 chr17 71307020 - SDK2 chr17 71348776 - Exonic hg19 BRCA TCGA-AN-A04A-01A 8 17 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 22874 ChimerSeq STARFusion TCGA_RNA-Seq DST-KIAA0319L DST chr6 56557186 - KIAA0319L chr1 35900682 - Exonic hg19 BRCA TCGA-AN-A04A-01A 4 33 5'UTR-CDS Inter-chr p12.1 Oncogene p34.3 Seq+ 22875 ChimerSeq STARFusion TCGA_RNA-Seq DST-KIAA0319L DST chr6 56564451 - KIAA0319L chr1 35900682 - Exonic hg19 BRCA TCGA-AN-A04A-01A 3 33 5'UTR-CDS Inter-chr p12.1 Oncogene p34.3 Seq+ 22876 ChimerSeq STARFusion TCGA_RNA-Seq NAPG-GREB1L NAPG chr18 10530834 + GREB1L chr18 19052992 + Exonic hg19 BRCA TCGA-AN-A04A-01A 2 31 In-Frame Intra-chr p11.22 q11.1 Seq+ 22877 ChimerSeq STARFusion TCGA_RNA-Seq DHDDS-PSMB2 DHDDS chr1 26759499 + PSMB2 chr1 36102033 - Exonic hg19 BRCA TCGA-OK-A5Q2-01A 4 18 Out-of-frame Intra-chr p36.11 p34.3 Seq+ 22878 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80954857 - MRPS28 chr8 80831385 - Exonic hg19 BRCA TCGA-D8-A1JS-01A 3 19 Out-of-frame Intra-chr q21.13 q21.13 22879 ChimerSeq STARFusion TCGA_RNA-Seq TOP1-C17orf64 TOP1 chr20 39729993 + C17orf64 chr17 58503144 + Exonic hg19 BRCA TCGA-C8-A273-01A 60 231 In-Frame Inter-chr q12 Oncogene q23.2 Seq+ 22880 ChimerSeq STARFusion TCGA_RNA-Seq EIF2S2-DEFB123 EIF2S2 chr20 32699902 - DEFB123 chr20 30037832 + Exonic hg19 BRCA TCGA-C8-A273-01A 40 124 Out-of-frame Intra-chr q11.22 q11.21 Seq+ 22881 ChimerSeq STARFusion TCGA_RNA-Seq PARD6B-CASS4 PARD6B chr20 49354616 + CASS4 chr20 55020956 + Exonic hg19 BRCA TCGA-C8-A273-01A 19 39 Out-of-frame Intra-chr q13.13 q13.31 Seq+ 22882 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-TUBD1 RPS6KB1 chr17 57970686 + TUBD1 chr17 57955695 - Exonic hg19 BRCA TCGA-C8-A273-01A 8 31 In-Frame Intra-chr q23.1 Oncogene q23.1 Seq+ 22883 ChimerSeq STARFusion TCGA_RNA-Seq ZFP28-SLC9A8 ZFP28 chr19 57061974 + SLC9A8 chr20 48456078 + Exonic hg19 BRCA TCGA-C8-A273-01A 8 28 In-Frame Inter-chr q13.43 Transcription factor q13.13 Seq+ 22884 ChimerSeq STARFusion TCGA_RNA-Seq RTFDC1-PARD6B RTFDC1 chr20 55043822 + PARD6B chr20 49366196 + Exonic hg19 BRCA TCGA-C8-A273-01A 10 10 Out-of-frame Intra-chr q13.31 q13.13 Seq+ 22885 ChimerSeq STARFusion TCGA_RNA-Seq MLL3-CNTNAP2 MLL3 chr7 152132711 - CNTNAP2 chr7 146471363 + Exonic hg19 BRCA TCGA-C8-A273-01A 2 40 Out-of-frame Intra-chr Tumor suppressor gene Tumor suppressor gene Seq+ 22886 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-TUBD1 RPS6KB1 chr17 57970686 + TUBD1 chr17 57944110 - Exonic hg19 BRCA TCGA-C8-A273-01A 2 31 Out-of-frame Intra-chr q23.1 Oncogene q23.1 Seq+ 22887 ChimerSeq STARFusion TCGA_RNA-Seq RALY-EIF2S2 RALY chr20 32581937 + EIF2S2 chr20 32691371 - Exonic hg19 BRCA TCGA-C8-A273-01A 6 4 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 22888 ChimerSeq STARFusion TCGA_RNA-Seq CPD-SKAP1 CPD chr17 28712254 + SKAP1 chr17 46474147 - Exonic hg19 BRCA TCGA-C8-A273-01A 5 4 In-Frame Intra-chr q11.2 Tumor suppressor gene q21.32 Seq+ 22889 ChimerSeq STARFusion TCGA_RNA-Seq RPRD1B-RALY RPRD1B chr20 36694658 + RALY chr20 32659872 + Exonic hg19 BRCA TCGA-C8-A273-01A 3 9 CDS-5'UTR Intra-chr q11.23 q11.22 Seq+ 22890 ChimerSeq STARFusion TCGA_RNA-Seq SMARCD2-HCK SMARCD2 chr17 61919819 - HCK chr20 30659465 + Exonic hg19 BRCA TCGA-C8-A273-01A 3 4 Out-of-frame Inter-chr q23.3 q11.21 TK:Src Seq+ 22891 ChimerSeq STARFusion TCGA_RNA-Seq TOM1L1-YPEL2 TOM1L1 chr17 53007567 + YPEL2 chr17 57465688 + Exonic hg19 BRCA TCGA-C8-A273-01A 3 1 Out-of-frame Intra-chr q22 q22 22892 ChimerSeq STARFusion TCGA_RNA-Seq SLC16A5-UNK SLC16A5 chr17 73085399 + UNK chr17 73812851 + Exonic hg19 BRCA TCGA-C8-A273-01A 2 2 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 22893 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 BRCA TCGA-C8-A273-01A 2 2 In-Frame Intra-chr p11.21 p11.21 22894 ChimerSeq STARFusion TCGA_RNA-Seq BOP1-CYHR1 BOP1 chr8 145512776 - CYHR1 chr8 145690479 - Exonic hg19 BRCA TCGA-BH-A0E0-01A 2 7 CDS-5'UTR Intra-chr q24.3 q24.3 Seq+ 22895 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK2-CEBPZ EIF2AK2 chr2 37349649 - CEBPZ chr2 37429046 - Exonic hg19 BRCA TCGA-A2-A04P-01A 71 157 Out-of-frame Intra-chr p22.2 p22.2 Transcription factor Seq+ 22896 ChimerSeq STARFusion TCGA_RNA-Seq CSN3-FDCSP CSN3 chr4 71108382 + FDCSP chr4 71096912 + Exonic hg19 BRCA TCGA-A2-A04P-01A 22 95 5'UTR-5'UTR Intra-chr q13.3 q13.3 22897 ChimerSeq STARFusion TCGA_RNA-Seq PDE7A-TRIM55 PDE7A chr8 66753606 - TRIM55 chr8 67061880 + Exonic hg19 BRCA TCGA-A2-A04P-01A 15 71 In-Frame Intra-chr q13.1 q13.1 Seq+ 22898 ChimerSeq STARFusion TCGA_RNA-Seq IPO8-CDH13 IPO8 chr12 30809618 - CDH13 chr16 83214475 + Exonic hg19 BRCA TCGA-A2-A04P-01A 3 69 Out-of-frame Inter-chr p11.21 q23.3 Tumor suppressor gene Seq+ 22899 ChimerSeq STARFusion TCGA_RNA-Seq IPO8-CDH13 IPO8 chr12 30809618 - CDH13 chr16 83205127 + Exonic hg19 BRCA TCGA-A2-A04P-01A 3 69 Out-of-frame Inter-chr p11.21 q23.3 Tumor suppressor gene Seq+ 22900 ChimerSeq STARFusion TCGA_RNA-Seq PDE7A-TRIM55 PDE7A chr8 66753606 - TRIM55 chr8 67062452 + Exonic hg19 BRCA TCGA-A2-A04P-01A 2 71 In-Frame Intra-chr q13.1 q13.1 Seq+ 22901 ChimerSeq STARFusion TCGA_RNA-Seq LRCH3-FYTTD1 LRCH3 chr3 197518411 + FYTTD1 chr3 197508682 + Exonic hg19 BRCA TCGA-A2-A04P-01A 7 7 Out-of-frame Intra-chr q29 q29 Seq+ 22902 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-MMP7 TMEM123 chr11 102272270 - MMP7 chr11 102391535 - Exonic hg19 BRCA TCGA-A2-A04P-01A 5 8 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 22903 ChimerSeq STARFusion TCGA_RNA-Seq LMNA-DUSP10 LMNA chr1 156085065 + DUSP10 chr1 221879808 - Exonic hg19 BRCA TCGA-A2-A04P-01A 3 1 Out-of-frame Intra-chr q22 q41 22904 ChimerSeq STARFusion TCGA_RNA-Seq EPC2-THSD7B EPC2 chr2 149447942 + THSD7B chr2 137813990 + Exonic hg19 BRCA TCGA-A2-A04P-01A 2 2 Out-of-frame Intra-chr q23.1 q22.1 Seq+ 22905 ChimerSeq STARFusion TCGA_RNA-Seq DUS1L-RPL13A DUS1L chr17 80016657 - RPL13A chr19 49994297 + Exonic hg19 BRCA TCGA-A2-A04P-01A 2 1 In-Frame Inter-chr q25.3 q13.33 Seq+ 22906 ChimerSeq STARFusion TCGA_RNA-Seq DUS1L-RPL13AP5 DUS1L chr17 80016657 - RPL13AP5 chr19 49994297 + Exonic hg19 BRCA TCGA-A2-A04P-01A 2 1 CDS-5'UTR Inter-chr q25.3 q24.1 22907 ChimerSeq STARFusion TCGA_RNA-Seq RFNG-CDC14B RFNG chr17 80009170 - CDC14B chr9 99266071 - Exonic hg19 BRCA TCGA-A2-A04P-01A 2 1 Out-of-frame Inter-chr q25.3 q22.33 22908 ChimerSeq STARFusion TCGA_RNA-Seq MTG1-ZNF511 MTG1 chr10 135216277 + ZNF511 chr10 135126292 + Exonic hg19 BRCA TCGA-C8-A137-01A 30 101 In-Frame Intra-chr q26.3 q26.3 Transcription factor Seq+ 22909 ChimerSeq STARFusion TCGA_RNA-Seq PREP-AIM1 PREP chr6 105729621 - AIM1 chr6 107003643 + Exonic hg19 BRCA TCGA-C8-A137-01A 23 52 In-Frame Intra-chr q21 Seq+ 22910 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-HOXB3 RNA45S5 chrUn_gl000220 111618 + HOXB3 chr17 46629787 - Exonic hg19 BRCA TCGA-C8-A137-01A 8 95 Out-of-frame Inter-chr q21.32 Transcription factor 22911 ChimerSeq STARFusion TCGA_RNA-Seq ZNF592-ZSCAN2 ZNF592 chr15 85326045 + ZSCAN2 chr15 85163833 + Exonic hg19 BRCA TCGA-C8-A137-01A 8 15 Out-of-frame Intra-chr q25.3 Transcription factor q25.2 Transcription factor Seq+ 22912 ChimerSeq STARFusion TCGA_RNA-Seq UBTD2-SH3PXD2B UBTD2 chr5 171661126 - SH3PXD2B chr5 171809131 - Exonic hg19 BRCA TCGA-C8-A137-01A 4 10 Out-of-frame Intra-chr q35.1 q35.1 Seq+ 22913 ChimerSeq STARFusion TCGA_RNA-Seq PSMB7-COL1A1 PSMB7 chr9 127115915 - COL1A1 chr17 48264015 - Exonic hg19 BRCA TCGA-C8-A137-01A 3 1 Out-of-frame Inter-chr q33.3 q21.33 Oncogene 22914 ChimerSeq STARFusion TCGA_RNA-Seq FAM102A-CIZ1 FAM102A chr9 130742271 - CIZ1 chr9 130929443 - Exonic hg19 BRCA TCGA-C8-A137-01A 3 0 Out-of-frame Intra-chr q34.11 q34.11 Tumor suppressor gene 22915 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V1G1-XIST ATP6V1G1 chr9 117354932 + XIST chrX 73049066 - Exonic hg19 BRCA TCGA-C8-A137-01A 2 1 CDS-3'UTR Inter-chr q32 q13.2 Tumor suppressor gene 22916 ChimerSeq STARFusion TCGA_RNA-Seq RPL38-CNN2 RPL38 chr17 72200097 + CNN2 chr19 1032558 + Exonic hg19 BRCA TCGA-C8-A137-01A 2 1 In-Frame Inter-chr q25.1 p13.3 22917 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-NFE2L2 ERBB2 chr17 37863394 + NFE2L2 chr2 178098999 - Exonic hg19 BRCA TCGA-C8-A137-01A 2 0 In-Frame Inter-chr q12 Oncogene q31.2 Oncogene Transcription factor 22918 ChimerSeq STARFusion TCGA_RNA-Seq ZNF37A-PIP5K1B ZNF37A chr10 38385560 + PIP5K1B chr9 71433377 + Exonic hg19 BRCA TCGA-AR-A2LL-01A 45 387 CDS-5'UTR Inter-chr p11.1 Transcription factor q21.11 Seq+ 22919 ChimerSeq STARFusion TCGA_RNA-Seq ZNF37A-PIP5K1B ZNF37A chr10 38385560 + PIP5K1B chr9 71357417 + Exonic hg19 BRCA TCGA-AR-A2LL-01A 33 370 CDS-5'UTR Inter-chr p11.1 Transcription factor q21.11 Seq+ 22920 ChimerSeq STARFusion TCGA_RNA-Seq ZNF37A-PIP5K1B ZNF37A chr10 38385560 + PIP5K1B chr9 71322519 + Exonic hg19 BRCA TCGA-AR-A2LL-01A 9 370 CDS-5'UTR Inter-chr p11.1 Transcription factor q21.11 Seq+ 22921 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A24-DHRS12 SLC25A24 chr1 108724563 - DHRS12 chr13 52373803 - Exonic hg19 BRCA TCGA-AR-A2LL-01A 14 34 CDS-5'UTR Inter-chr q14.3 Seq+ 22922 ChimerSeq STARFusion TCGA_RNA-Seq ZMIZ1-TACC1P1 ZMIZ1 chr10 80976031 + TACC1P1 chr10 37811939 + Exonic hg19 BRCA TCGA-AR-A2LL-01A 10 17 Out-of-frame Intra-chr q22.3 p11.21 Seq+ 22923 ChimerSeq STARFusion TCGA_RNA-Seq DOCK1-APBA1 DOCK1 chr10 129055693 + APBA1 chr9 72132195 - Exonic hg19 BRCA TCGA-AR-A2LL-01A 2 8 CDS-5'UTR Inter-chr q26.2 q21.12 Seq+ 22924 ChimerSeq STARFusion TCGA_RNA-Seq SPTAN1-CADPS2 SPTAN1 chr9 131314975 + CADPS2 chr7 122377122 - Exonic hg19 BRCA TCGA-D8-A1JI-01A 37 76 5'UTR-CDS Inter-chr q34.11 q31.32 Seq+ 22925 ChimerSeq STARFusion TCGA_RNA-Seq SPTAN1-CADPS2 SPTAN1 chr9 131314975 + CADPS2 chr7 122388730 - Exonic hg19 BRCA TCGA-D8-A1JI-01A 5 76 5'UTR-CDS Inter-chr q34.11 q31.32 Seq+ 22926 ChimerSeq STARFusion TCGA_RNA-Seq DENND1A-CADPS2 DENND1A chr9 126414292 - CADPS2 chr7 122377122 - Exonic hg19 BRCA TCGA-D8-A1JI-01A 11 32 In-Frame Inter-chr q33.3 q31.32 Seq+ 22927 ChimerSeq STARFusion TCGA_RNA-Seq PTGES2-DENND1A PTGES2 chr9 130889718 - DENND1A chr9 126345549 - Exonic hg19 BRCA TCGA-D8-A1JI-01A 12 25 In-Frame Intra-chr q34.11 q33.3 Seq+ 22928 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0368-PACS1 KIAA0368 chr9 114182297 - PACS1 chr11 66000431 + Exonic hg19 BRCA TCGA-D8-A1JI-01A 6 13 Out-of-frame Inter-chr q31.3 q13.1 Seq+ 22929 ChimerSeq STARFusion TCGA_RNA-Seq CADPS2-DHCR7 CADPS2 chr7 122377009 - DHCR7 chr11 71158780 - Exonic hg19 BRCA TCGA-D8-A1JI-01A 4 18 CDS-5'UTR Inter-chr q31.32 q13.4 Seq+ 22930 ChimerSeq STARFusion TCGA_RNA-Seq BAG4-ZMAT4 BAG4 chr8 38034657 + ZMAT4 chr8 40683199 - Exonic hg19 BRCA TCGA-AC-A2BM-01A 26 46 CDS-5'UTR Intra-chr p11.23 p11.21 Transcription factor Seq+ 22931 ChimerSeq STARFusion TCGA_RNA-Seq TARBP1-ARID4B TARBP1 chr1 234561419 - ARID4B chr1 235311762 - Exonic hg19 BRCA TCGA-AC-A2BM-01A 13 74 CDS-3'UTR Intra-chr q42.2 q42.3 Seq+ 22932 ChimerSeq STARFusion TCGA_RNA-Seq TARBP1-RBM34 TARBP1 chr1 234561419 - RBM34 chr1 235311762 - Exonic hg19 BRCA TCGA-AC-A2BM-01A 13 74 In-Frame Intra-chr q42.2 q42.3 Seq+ 22933 ChimerSeq STARFusion TCGA_RNA-Seq IGHMBP2-PITPNM1 IGHMBP2 chr11 68672398 + PITPNM1 chr11 67259648 - Exonic hg19 BRCA TCGA-AC-A2BM-01A 7 53 Out-of-frame Intra-chr q13.3 q13.2 Seq+ 22934 ChimerSeq STARFusion TCGA_RNA-Seq NAGA-WBP2NL NAGA chr22 42458831 - WBP2NL chr22 42426724 + Exonic hg19 BRCA TCGA-AC-A2BM-01A 15 17 CDS-3'UTR Intra-chr q13.2 q13.2 Seq+ 22935 ChimerSeq STARFusion TCGA_RNA-Seq MRPL21-MYO1B MRPL21 chr11 68668003 - MYO1B chr2 192265108 + Exonic hg19 BRCA TCGA-AC-A2BM-01A 5 54 5'UTR-CDS Inter-chr q13.3 q32.3 Seq+ 22936 ChimerSeq STARFusion TCGA_RNA-Seq MRPL21-MYO1B MRPL21 chr11 68668016 - MYO1B chr2 192265108 + Exonic hg19 BRCA TCGA-AC-A2BM-01A 3 51 Out-of-frame Inter-chr q13.3 q32.3 Seq+ 22937 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K2-IWS1 MAP3K2 chr2 128093446 - IWS1 chr2 128238751 - Exonic hg19 BRCA TCGA-AC-A2BM-01A 8 25 In-Frame Intra-chr q14.3 STE:STE11 q14.3 Seq+ 22938 ChimerSeq STARFusion TCGA_RNA-Seq VAV2-TMEM8C VAV2 chr9 136804225 - TMEM8C chr9 136385410 - Exonic hg19 BRCA TCGA-AC-A2BM-01A 7 16 In-Frame Intra-chr q34.2 q34.2 Seq+ 22939 ChimerSeq STARFusion TCGA_RNA-Seq HHAT-SERTAD4 HHAT chr1 210578023 + SERTAD4 chr1 210411289 + Exonic hg19 BRCA TCGA-AC-A2BM-01A 5 10 CDS-5'UTR Intra-chr Seq+ 22940 ChimerSeq STARFusion TCGA_RNA-Seq INTS4-GAB2 INTS4 chr11 77690042 - GAB2 chr11 77991947 - Exonic hg19 BRCA TCGA-AC-A2BM-01A 2 22 In-Frame Intra-chr q14.1 q14.1 KB Seq+ 22941 ChimerSeq STARFusion TCGA_RNA-Seq SHANK1-UNC5D SHANK1 chr19 51214628 - UNC5D chr8 35541065 + Exonic hg19 BRCA TCGA-AC-A2BM-01A 3 6 In-Frame Inter-chr q13.33 p12 Tumor suppressor gene 22942 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS13-LHX2 ADAMTS13 chr9 136315086 + LHX2 chr9 126794699 + Exonic hg19 BRCA TCGA-AC-A2BM-01A 3 4 Out-of-frame Intra-chr q33.3 Transcription factor Seq+ 22943 ChimerSeq STARFusion TCGA_RNA-Seq ITCH-RALY ITCH chr20 33033266 + RALY chr20 32619328 + Exonic hg19 BRCA TCGA-AC-A2BM-01A 2 7 CDS-5'UTR Intra-chr q11.22 q11.22 Seq+ 22944 ChimerSeq STARFusion TCGA_RNA-Seq PBX1-CTNNA3 PBX1 chr1 164781386 + CTNNA3 chr10 68535282 - Exonic hg19 BRCA TCGA-B6-A0IQ-01A 22 50 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor q21.3 Tumor suppressor gene Seq+ 22945 ChimerSeq STARFusion TCGA_RNA-Seq NCOA4-LOC728407 NCOA4 chr10 51565296 + LOC728407 chr10 51262177 - Exonic hg19 BRCA TCGA-B6-A0IQ-01A 21 31 5'UTR-3'UTR Intra-chr q11.22 Oncogene Tumor suppressor gene 22946 ChimerSeq STARFusion TCGA_RNA-Seq UTRN-ECT2L UTRN chr6 144898424 + ECT2L chr6 139222085 + Exonic hg19 BRCA TCGA-B6-A0IQ-01A 15 27 Out-of-frame Intra-chr q24.2 q24.1 Seq+ 22947 ChimerSeq STARFusion TCGA_RNA-Seq NFIA-LTV1 NFIA chr1 61743257 + LTV1 chr6 144167188 + Exonic hg19 BRCA TCGA-B6-A0IQ-01A 3 14 Out-of-frame Inter-chr p31.3 Transcription factor q24.2 Seq+ 22948 ChimerSeq STARFusion TCGA_RNA-Seq MAP7-ARG1 MAP7 chr6 136871480 - ARG1 chr6 131904200 + Exonic hg19 BRCA TCGA-B6-A0IQ-01A 2 9 Out-of-frame Intra-chr q23.3 q23.2 Tumor suppressor gene Seq+ 22949 ChimerSeq STARFusion TCGA_RNA-Seq MAP7-CNKSR3 MAP7 chr6 136686873 - CNKSR3 chr6 154771392 - Exonic hg19 BRCA TCGA-B6-A0IQ-01A 3 4 In-Frame Intra-chr q23.3 q25.2 Seq+ 22950 ChimerSeq STARFusion TCGA_RNA-Seq ILVBL-SYDE1 ILVBL chr19 15226963 - SYDE1 chr19 15219867 + Exonic hg19 BRCA TCGA-B6-A0IQ-01A 2 6 In-Frame Intra-chr p13.12 p13.12 Seq+ 22951 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L2-ZNF252P SIPA1L2 chr1 232607117 - ZNF252P chr8 146203939 - Exonic hg19 BRCA TCGA-B6-A0IQ-01A 2 6 CDS-3'UTR Inter-chr q42.2 q24.3 22952 ChimerSeq STARFusion TCGA_RNA-Seq ZNF823-VAV1 ZNF823 chr19 11849632 - VAV1 chr19 6820713 + Exonic hg19 BRCA TCGA-B6-A0IQ-01A 2 4 In-Frame Intra-chr p13.2 Transcription factor p13.3 Seq+ 22953 ChimerSeq STARFusion TCGA_RNA-Seq RHPN1-RXRA RHPN1 chr8 144451217 + RXRA chr9 137325948 + Exonic hg19 BRCA TCGA-B6-A0IQ-01A 2 0 Out-of-frame Inter-chr q24.3 q34.2 Transcription factor 22954 ChimerSeq STARFusion TCGA_RNA-Seq KDM4B-UBA52 KDM4B chr19 5082515 + UBA52 chr19 18684103 + Exonic hg19 BRCA TCGA-E2-A14Z-01A 7 24 CDS-5'UTR Intra-chr p13.3 p13.11 Seq+ 22955 ChimerSeq STARFusion TCGA_RNA-Seq BPTF-NPEPPS BPTF chr17 65850878 + NPEPPS chr17 45699134 + Exonic hg19 BRCA TCGA-E2-A14Z-01A 5 10 Out-of-frame Intra-chr q24.2 Transcription factor q21.32 Seq+ 22956 ChimerSeq STARFusion TCGA_RNA-Seq ATF2-DIRC3 ATF2 chr2 176015788 - DIRC3 chr2 218192875 - Exonic hg19 BRCA TCGA-E2-A14Z-01A 2 12 3'UTR-3'UTR Intra-chr q31.1 Transcription factor q35 Seq+ 22957 ChimerSeq STARFusion TCGA_RNA-Seq RNPC3-KIAA0825 RNPC3 chr1 104068884 + KIAA0825 chr5 93753085 - Exonic hg19 BRCA TCGA-E2-A14Z-01A 3 5 CDS-3'UTR Inter-chr p21.1 q15 Seq+ 22958 ChimerSeq STARFusion TCGA_RNA-Seq STK39-ITGB6 STK39 chr2 168921829 - ITGB6 chr2 160994710 - Exonic hg19 BRCA TCGA-E2-A14Z-01A 3 3 In-Frame Intra-chr q24.3 q24.2 Seq+ 22959 ChimerSeq STARFusion TCGA_RNA-Seq SULF1-EIF4A1 SULF1 chr8 70488444 + EIF4A1 chr17 7478437 + Exonic hg19 BRCA TCGA-E2-A14Z-01A 2 0 In-Frame Inter-chr q13.2 p13.1 22960 ChimerSeq STARFusion TCGA_RNA-Seq G6PD-F8 G6PD chrX 153774251 - F8 chrX 154091502 - Exonic hg19 BRCA TCGA-BH-A0B5-01A 14 20 In-Frame Intra-chr q28 Oncogene q28 Seq+ 22961 ChimerSeq STARFusion TCGA_RNA-Seq VWA8-RB1 VWA8 chr13 42439872 - RB1 chr13 48916735 + Exonic hg19 BRCA TCGA-BH-A18G-01A 2 3 Out-of-frame Intra-chr q14.11 q14.2 Oncogene Tumor suppressor gene Seq+ 22962 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM1-ABCC11 CEACAM1 chr19 43025419 - ABCC11 chr16 48230232 - Exonic hg19 BRCA TCGA-BH-A0DE-01A 2 0 In-Frame Inter-chr q13.2 Tumor suppressor gene q12.1 22963 ChimerSeq STARFusion TCGA_RNA-Seq NOL3-UBE2D2 NOL3 chr16 67204477 + UBE2D2 chr5 138979957 + Exonic hg19 BRCA TCGA-BH-A0DE-01A 2 0 5'UTR-5'UTR Inter-chr q22.1 q31.2 Seq+ 22964 ChimerSeq STARFusion TCGA_RNA-Seq WIPI1-BPTF WIPI1 chr17 66446869 - BPTF chr17 65955657 + Exonic hg19 BRCA TCGA-BH-A0DE-01A 2 0 In-Frame Intra-chr q24.2 q24.2 Transcription factor 22965 ChimerSeq STARFusion TCGA_RNA-Seq TYW1-TPST1 TYW1 chr7 66520874 + TPST1 chr7 65751498 + Exonic hg19 BRCA TCGA-A2-A25E-01A 5 4 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 22966 ChimerSeq STARFusion TCGA_RNA-Seq CNNM2-PPP2R4 CNNM2 chr10 104679858 + PPP2R4 chr9 131909666 + Exonic hg19 BRCA TCGA-A2-A25E-01A 2 1 Out-of-frame Inter-chr q24.32 Tumor suppressor gene 22967 ChimerSeq STARFusion TCGA_RNA-Seq ATP11A-TUBGCP3 ATP11A chr13 113490565 + TUBGCP3 chr13 113209319 - Exonic hg19 BRCA TCGA-D8-A143-01A 4 6 In-Frame Intra-chr q34 Seq+ 22968 ChimerSeq STARFusion TCGA_RNA-Seq ATIC-GIGYF2 ATIC chr2 216184454 + GIGYF2 chr2 233612325 + Exonic hg19 BRCA TCGA-D8-A143-01A 2 0 In-Frame Intra-chr q35 q37.1 22969 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-C6orf203 PTPRK chr6 128841404 - C6orf203 chr6 107365464 + Exonic hg19 BRCA TCGA-BH-A1F0-01A 26 62 Out-of-frame Intra-chr Tumor suppressor gene q21 Seq+ 22970 ChimerSeq STARFusion TCGA_RNA-Seq PTPRF-GUCA2A PTPRF chr1 44019612 + GUCA2A chr1 42629281 - Exonic hg19 BRCA TCGA-BH-A1F0-01A 23 72 Out-of-frame Intra-chr p34.2 p34.2 Seq+ 22971 ChimerSeq STARFusion TCGA_RNA-Seq KIT-PDGFRA KIT chr4 55524248 + PDGFRA chr4 55124924 + Exonic hg19 BRCA TCGA-BH-A1F0-01A 9 60 CDS-5'UTR Intra-chr q12 TK:PDGFR Oncogene q12 Oncogene 22972 ChimerSeq STARFusion TCGA_RNA-Seq KIT-PDGFRA KIT chr4 55524248 + PDGFRA chr4 55127262 + Exonic hg19 BRCA TCGA-BH-A1F0-01A 2 60 In-Frame Intra-chr q12 TK:PDGFR Oncogene q12 Oncogene 22973 ChimerSeq STARFusion TCGA_RNA-Seq AGAP3-TG AGAP3 chr7 150784159 + TG chr8 133948001 + Exonic hg19 BRCA TCGA-BH-A1F0-01A 7 11 Out-of-frame Inter-chr q36.1 q24.22 Seq+ 22974 ChimerSeq STARFusion TCGA_RNA-Seq ABTB2-LOC100132735 ABTB2 chr11 34378248 - LOC100132735 chr6 140177901 + Exonic hg19 BRCA TCGA-BH-A1F0-01A 6 14 CDS-5'UTR Inter-chr p13 22975 ChimerSeq STARFusion TCGA_RNA-Seq FAM117B-ATIC FAM117B chr2 203500511 + ATIC chr2 216177221 + Exonic hg19 BRCA TCGA-BH-A1F0-01A 6 13 In-Frame Intra-chr q33.2 q35 Seq+ 22976 ChimerSeq STARFusion TCGA_RNA-Seq EGF-ENPEP EGF chr4 110834618 + ENPEP chr4 111409697 + Exonic hg19 BRCA TCGA-BH-A1F0-01A 3 24 Out-of-frame Intra-chr q25 q25 Seq+ 22977 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A36-LOC100507412 SLC25A36 chr3 140678382 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-BH-A1F0-01A 2 24 CDS-5'UTR Inter-chr q23 22978 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPUL2-TTC9C HNRNPUL2 chr11 62494091 - TTC9C chr11 62502854 + Exonic hg19 BRCA TCGA-BH-A1F0-01A 5 10 In-Frame Intra-chr q12.3 q12.3 Seq+ 22979 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-AHI1 VPS13B chr8 100050794 + AHI1 chr6 135644462 - Exonic hg19 BRCA TCGA-BH-A1F0-01A 4 14 In-Frame Inter-chr q22.2 q23.3 Seq+ 22980 ChimerSeq STARFusion TCGA_RNA-Seq CIC-ZFP57 CIC chr19 42791392 + ZFP57 chr6_cox_hap2 1160337 - Exonic hg19 BRCA TCGA-BH-A1F0-01A 6 5 CDS-3'UTR Inter-chr q13.2 Oncogene Tumor suppressor gene Transcription factor p22.1 Transcription factor Seq+ 22981 ChimerSeq STARFusion TCGA_RNA-Seq PSMB3-RPL23 PSMB3 chr17 36909587 + RPL23 chr17 37009358 - Exonic hg19 BRCA TCGA-BH-A1F0-01A 5 5 Out-of-frame Intra-chr q12 22982 ChimerSeq STARFusion TCGA_RNA-Seq C6orf170-HBS1L C6orf170 chr6 121600267 - HBS1L chr6 135315013 - Exonic hg19 BRCA TCGA-BH-A1F0-01A 3 11 In-Frame Intra-chr q23.3 Seq+ 22983 ChimerSeq STARFusion TCGA_RNA-Seq USP4-RHOA USP4 chr3 49372902 - RHOA chr3 49400059 - Exonic hg19 BRCA TCGA-BH-A1F0-01A 3 10 In-Frame Intra-chr p21.31 p21.31 Oncogene Tumor suppressor gene Seq+ 22984 ChimerSeq STARFusion TCGA_RNA-Seq AGAP3-TG AGAP3 chr7 150784159 + TG chr8 133961021 + Exonic hg19 BRCA TCGA-BH-A1F0-01A 2 11 In-Frame Inter-chr q36.1 q24.22 Seq+ 22985 ChimerSeq STARFusion TCGA_RNA-Seq PSME4-SLC22A16 PSME4 chr2 54101476 - SLC22A16 chr6 110778220 - Exonic hg19 BRCA TCGA-BH-A1F0-01A 4 3 Out-of-frame Inter-chr p16.2 q21 Seq+ 22986 ChimerSeq STARFusion TCGA_RNA-Seq EPT1-HADHB EPT1 chr2 26590088 + HADHB chr2 26499941 + Exonic hg19 BRCA TCGA-BH-A1F0-01A 2 10 Out-of-frame Intra-chr p23.3 22987 ChimerSeq STARFusion TCGA_RNA-Seq HIVEP3-ASCC3 HIVEP3 chr1 42094420 - ASCC3 chr6 101054964 - Exonic hg19 BRCA TCGA-BH-A1F0-01A 2 10 5'UTR-CDS Inter-chr p34.2 Tumor suppressor gene Transcription factor q16.3 Seq+ 22988 ChimerSeq STARFusion TCGA_RNA-Seq EIF3H-RAD21 EIF3H chr8 117738255 - RAD21 chr8 117879000 - Exonic hg19 BRCA TCGA-BH-A1F0-01A 2 1 CDS-5'UTR Intra-chr q24.11 q24.11 Seq+ 22989 ChimerSeq STARFusion TCGA_RNA-Seq SMG6-SLC16A14 SMG6 chr17 2139786 - SLC16A14 chr2 230914620 - Exonic hg19 BRCA TCGA-BH-A1F0-01A 2 1 In-Frame Inter-chr p13.3 q36.3 22990 ChimerSeq STARFusion TCGA_RNA-Seq DDX58-NDUFB6 DDX58 chr9 32500803 - NDUFB6 chr9 32553942 - Exonic hg19 BRCA TCGA-BH-A1F0-01A 2 0 Out-of-frame Intra-chr p21.1 Tumor suppressor gene p21.1 22991 ChimerSeq STARFusion TCGA_RNA-Seq FAM110D-ERI3 FAM110D chr1 26485617 + ERI3 chr1 44713710 - Exonic hg19 BRCA TCGA-BH-A1F0-01A 2 0 5'UTR-CDS Intra-chr p36.11 p34.1 22992 ChimerSeq STARFusion TCGA_RNA-Seq SCD5-TMEM150C SCD5 chr4 83601860 - TMEM150C chr4 83425820 - Exonic hg19 BRCA TCGA-BH-A1F0-01A 2 0 CDS-5'UTR Intra-chr q21.22 q21.22 Seq+ 22993 ChimerSeq STARFusion TCGA_RNA-Seq NF2-GRAP2 NF2 chr22 30035201 + GRAP2 chr22 40351823 + Exonic hg19 BRCA TCGA-A2-A0SV-01A 23 74 In-Frame Intra-chr q12.2 Oncogene Tumor suppressor gene q13.1 Seq+ 22994 ChimerSeq STARFusion TCGA_RNA-Seq OSTM1-SNX3 OSTM1 chr6 108395454 - SNX3 chr6 108544249 - Exonic hg19 BRCA TCGA-A2-A0SV-01A 6 28 In-Frame Intra-chr q21 q21 Seq+ 22995 ChimerSeq STARFusion TCGA_RNA-Seq CAST-FAM172A CAST chr5 96031611 + FAM172A chr5 93300228 - Exonic hg19 BRCA TCGA-A2-A0SV-01A 7 21 In-Frame Intra-chr q15 q15 Tumor suppressor gene Seq+ 22996 ChimerSeq STARFusion TCGA_RNA-Seq CAST-FAM172A CAST chr5 96031611 + FAM172A chr5 93330209 - Exonic hg19 BRCA TCGA-A2-A0SV-01A 3 21 5'UTR-CDS Intra-chr q15 q15 Tumor suppressor gene Seq+ 22997 ChimerSeq STARFusion TCGA_RNA-Seq MACROD2-TIPIN MACROD2 chr20 13983050 + TIPIN chr15 66633694 - Exonic hg19 BRCA TCGA-A2-A0SV-01A 2 0 In-Frame Inter-chr p12.1 q22.31 22998 ChimerSeq STARFusion TCGA_RNA-Seq PDE7A-C8orf34 PDE7A chr8 66753606 - C8orf34 chr8 69380927 + Exonic hg19 BRCA TCGA-A2-A0SV-01A 2 0 Out-of-frame Intra-chr q13.1 q13.2 22999 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-POLD4 BCAS3 chr17 59001861 + POLD4 chr11 67120548 - Exonic hg19 BRCA TCGA-AN-A0XW-01A 23 46 In-Frame Inter-chr q23.2 q13.2 Seq+ 23000 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-RAD51C BCAS3 chr17 58885437 + RAD51C chr17 56801401 + Exonic hg19 BRCA TCGA-AN-A0XW-01A 5 31 Out-of-frame Intra-chr q23.2 q22 Tumor suppressor gene Seq+ 23001 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-TNFAIP1 SSH2 chr17 28120912 - TNFAIP1 chr17 26666434 + Exonic hg19 BRCA TCGA-AN-A0XW-01A 3 20 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 23002 ChimerSeq STARFusion TCGA_RNA-Seq RFWD2-SRGAP2 RFWD2 chr1 176175708 - SRGAP2 chr1 206631969 + Exonic hg19 BRCA TCGA-AN-A0XW-01A 4 9 In-Frame Intra-chr q25.2 Tumor suppressor gene q32.1 Tumor suppressor gene Seq+ 23003 ChimerSeq STARFusion TCGA_RNA-Seq NSRP1-SKAP1 NSRP1 chr17 28443881 + SKAP1 chr17 46474147 - Exonic hg19 BRCA TCGA-AN-A0XW-01A 4 6 Out-of-frame Intra-chr q11.2 q21.32 Seq+ 23004 ChimerSeq STARFusion TCGA_RNA-Seq SPTLC3-MRPL45P2 SPTLC3 chr20 13107364 + MRPL45P2 chr17 45534159 - Exonic hg19 BRCA TCGA-AN-A0XW-01A 3 4 CDS-3'UTR Inter-chr p12.1 q21.32 Seq+ 23005 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB2-SYNE4 RPS6KB2 chr11 67196094 + SYNE4 chr19 36496339 - Exonic hg19 BRCA TCGA-AN-A0XW-01A 2 0 Out-of-frame Inter-chr q13.2 q13.12 23006 ChimerSeq STARFusion TCGA_RNA-Seq PPIF-REEP3 PPIF chr10 81107499 + REEP3 chr10 65354538 + Exonic hg19 BRCA TCGA-AN-A0AJ-01A 201 298 In-Frame Intra-chr q22.3 q21.3 Seq+ 23007 ChimerSeq STARFusion TCGA_RNA-Seq LACE1-ZUFSP LACE1 chr6 108645252 + ZUFSP chr6 116957042 - Exonic hg19 BRCA TCGA-AN-A0AJ-01A 68 176 In-Frame Intra-chr q22.1 Transcription factor Seq+ 23008 ChimerSeq STARFusion TCGA_RNA-Seq GRHL2-FAM213A GRHL2 chr8 102505017 + FAM213A chr10 82191742 + Exonic hg19 BRCA TCGA-AN-A0AJ-01A 81 94 Out-of-frame Inter-chr q22.3 Transcription factor q23.1 Seq+ 23009 ChimerSeq STARFusion TCGA_RNA-Seq CD151-MIPEP CD151 chr11 833026 + MIPEP chr13 24334356 - Exonic hg19 BRCA TCGA-AN-A0AJ-01A 28 13 5'UTR-CDS Inter-chr p15.5 q12.12 Seq+ 23010 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC5-LCT ZDHHC5 chr11 57440666 + LCT chr2 136555708 - Exonic hg19 BRCA TCGA-AN-A0AJ-01A 11 72 Out-of-frame Inter-chr q12.1 q21.3 Seq+ 23011 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC5-LCT ZDHHC5 chr11 57440666 + LCT chr2 136558379 - Exonic hg19 BRCA TCGA-AN-A0AJ-01A 9 72 Out-of-frame Inter-chr q12.1 q21.3 Seq+ 23012 ChimerSeq STARFusion TCGA_RNA-Seq TIMM23B-LINC00843 TIMM23B chr10 51387763 + LINC00843 chr10 51732772 + Exonic hg19 BRCA TCGA-AN-A0AJ-01A 11 53 Out-of-frame Intra-chr q11.23 q11.23 23013 ChimerSeq STARFusion TCGA_RNA-Seq RAB6A-MRPL48 RAB6A chr11 73471611 - MRPL48 chr11 73516072 + Exonic hg19 BRCA TCGA-AN-A0AJ-01A 13 25 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 23014 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC24-FRG2B ZCCHC24 chr10 81192314 - FRG2B chr10 135440168 - Exonic hg19 BRCA TCGA-AN-A0AJ-01A 5 36 Out-of-frame Intra-chr q22.3 q26.3 23015 ChimerSeq STARFusion TCGA_RNA-Seq ADK-KCNMA1 ADK chr10 76074503 + KCNMA1 chr10 79011014 - Exonic hg19 BRCA TCGA-AN-A0AJ-01A 10 14 In-Frame Intra-chr q22.2 q22.3 Seq+ 23016 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD44-CD24P4 ANKRD44 chr2 197986056 - CD24P4 chrY 21154526 - Exonic hg19 BRCA TCGA-AN-A0AJ-01A 9 11 Out-of-frame Inter-chr q33.1 q11.222 23017 ChimerSeq STARFusion TCGA_RNA-Seq RRP12-CRTAC1 RRP12 chr10 99132803 - CRTAC1 chr10 99771094 - Exonic hg19 BRCA TCGA-AN-A0AJ-01A 6 22 In-Frame Intra-chr q24.1 q24.2 Seq+ 23018 ChimerSeq STARFusion TCGA_RNA-Seq RAB6A-MRPL48 RAB6A chr11 73471611 - MRPL48 chr11 73536753 + Exonic hg19 BRCA TCGA-AN-A0AJ-01A 4 25 In-Frame Intra-chr q13.4 q13.4 Seq+ 23019 ChimerSeq STARFusion TCGA_RNA-Seq CD151-MIPEP CD151 chr11 833022 + MIPEP chr13 24334356 - Exonic hg19 BRCA TCGA-AN-A0AJ-01A 6 12 5'UTR-CDS Inter-chr p15.5 q12.12 Seq+ 23020 ChimerSeq STARFusion TCGA_RNA-Seq XYLT2-ACSF2 XYLT2 chr17 48435901 + ACSF2 chr17 48538038 + Exonic hg19 BRCA TCGA-AN-A0AJ-01A 3 11 Out-of-frame Intra-chr q21.33 q21.33 Seq+ 23021 ChimerSeq STARFusion TCGA_RNA-Seq BLOC1S4-RN7SL2 BLOC1S4 chr4 6718805 + RN7SL2 chr14 50329501 - Exonic hg19 BRCA TCGA-AN-A0AJ-01A 3 9 Out-of-frame Inter-chr p16.1 q21.3 23022 ChimerSeq STARFusion TCGA_RNA-Seq GRHL2-TSPAN14 GRHL2 chr8 102505017 + TSPAN14 chr10 82248973 + Exonic hg19 BRCA TCGA-AN-A0AJ-01A 2 13 CDS-5'UTR Inter-chr q22.3 Transcription factor q23.1 Seq+ 23023 ChimerSeq STARFusion TCGA_RNA-Seq KARS-WDR59 KARS chr16 75681476 - WDR59 chr16 74999720 - Exonic hg19 BRCA TCGA-AN-A0AJ-01A 2 13 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 23024 ChimerSeq STARFusion TCGA_RNA-Seq STK39-MAT1A STK39 chr2 168931492 - MAT1A chr10 82045345 - Exonic hg19 BRCA TCGA-AN-A0AJ-01A 3 8 Out-of-frame Inter-chr q24.3 q22.3 Seq+ 23025 ChimerSeq STARFusion TCGA_RNA-Seq BMPR1B-MCC BMPR1B chr4 95917285 + MCC chr5 112406931 - Exonic hg19 BRCA TCGA-A2-A0ET-01A 7 21 5'UTR-CDS Inter-chr q22.3 TKL:STKR q22.2 Tumor suppressor gene Seq+ 23026 ChimerSeq STARFusion TCGA_RNA-Seq C5orf63-MARCH3 C5orf63 chr5 126383134 - 2019_ 3_ 3_ chr5 126253919 - Exonic hg19 BRCA TCGA-A2-A0ET-01A 4 3 Out-of-frame Intra-chr q23.2 q23.2 23027 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80954857 - MRPS28 chr8 80831385 - Exonic hg19 BRCA TCGA-A2-A0ET-01A 3 4 Out-of-frame Intra-chr q21.13 q21.13 23028 ChimerSeq STARFusion TCGA_RNA-Seq CRBN-GRM7 CRBN chr3 3209318 - GRM7 chr3 6870318 + Exonic hg19 BRCA TCGA-BH-A0HP-01A 3 15 CDS-5'UTR Intra-chr p26.2 Oncogene p26.1 Seq+ 23029 ChimerSeq STARFusion TCGA_RNA-Seq TTC25-BRCA1 TTC25 chr17 40093180 + BRCA1 chr17 41215968 - Exonic hg19 BRCA TCGA-A7-A26H-01A 2 5 In-Frame Intra-chr q21.2 q21.31 Oncogene Tumor suppressor gene 23030 ChimerSeq STARFusion TCGA_RNA-Seq CELSR2-KCNC4 CELSR2 chr1 109816292 + KCNC4 chr1 110765586 + Exonic hg19 BRCA TCGA-A7-A26H-01A 2 3 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 23031 ChimerSeq STARFusion TCGA_RNA-Seq C20orf112-COMMD7 C20orf112 chr20 31172372 - COMMD7 chr20 31294562 - Exonic hg19 BRCA TCGA-A8-A08L-01A 11 30 Out-of-frame Intra-chr q11.21 Seq+ 23032 ChimerSeq STARFusion TCGA_RNA-Seq IPO11-TNFAIP8 IPO11 chr5 61770291 + TNFAIP8 chr5 118728511 + Exonic hg19 BRCA TCGA-A8-A08L-01A 9 25 In-Frame Intra-chr q12.1 q23.1 Seq+ 23033 ChimerSeq STARFusion TCGA_RNA-Seq FAR2-LOC101055625 FAR2 chr12 29423571 + LOC101055625 chr12 29614729 + Exonic hg19 BRCA TCGA-A8-A08L-01A 4 36 Out-of-frame Intra-chr p11.22 23034 ChimerSeq STARFusion TCGA_RNA-Seq C20orf112-COMMD7 C20orf112 chr20 31172472 - COMMD7 chr20 31294561 - Exonic hg19 BRCA TCGA-A8-A08L-01A 5 30 Out-of-frame Intra-chr q11.21 Seq+ 23035 ChimerSeq STARFusion TCGA_RNA-Seq FAR2-LOC101055625 FAR2 chr12 29423571 + LOC101055625 chr12 29614667 + Exonic hg19 BRCA TCGA-A8-A08L-01A 3 36 Out-of-frame Intra-chr p11.22 23036 ChimerSeq STARFusion TCGA_RNA-Seq FAR2-LOC101055625 FAR2 chr12 29423571 + LOC101055625 chr12 29639819 + Exonic hg19 BRCA TCGA-A8-A08L-01A 2 36 Out-of-frame Intra-chr p11.22 23037 ChimerSeq STARFusion TCGA_RNA-Seq CTBP2-ADAM12 CTBP2 chr10 126799559 - ADAM12 chr10 128019078 - Exonic hg19 BRCA TCGA-A8-A08L-01A 2 29 5'UTR-CDS Intra-chr q26.13 q26.2 Seq+ 23038 ChimerSeq STARFusion TCGA_RNA-Seq DAP3-ATF3 DAP3 chr1 155686919 + ATF3 chr1 212788360 + Exonic hg19 BRCA TCGA-A8-A08L-01A 5 13 CDS-5'UTR Intra-chr q22 q32.3 Tumor suppressor gene Transcription factor Seq+ 23039 ChimerSeq STARFusion TCGA_RNA-Seq TANGO6-CDH1 TANGO6 chr16 68964198 + CDH1 chr16 68835573 + Exonic hg19 BRCA TCGA-A8-A08L-01A 3 8 Out-of-frame Intra-chr q22.1 q22.1 Oncogene Tumor suppressor gene 23040 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 BRCA TCGA-A8-A08L-01A 2 2 CDS-5'UTR Intra-chr q23 Seq+ 23041 ChimerSeq STARFusion TCGA_RNA-Seq EZR-IGF2R EZR chr6 159239114 - IGF2R chr6 160445604 + Exonic hg19 BRCA TCGA-A8-A08L-01A 2 1 In-Frame Intra-chr q25.3 q25.3 Oncogene Tumor suppressor gene 23042 ChimerSeq STARFusion TCGA_RNA-Seq COL5A2-PMS1 COL5A2 chr2 190044234 - PMS1 chr2 190656516 + Exonic hg19 BRCA TCGA-A8-A08L-01A 2 0 CDS-5'UTR Intra-chr q32.2 q32.2 Oncogene 23043 ChimerSeq STARFusion TCGA_RNA-Seq IPO11-HSD17B4 IPO11 chr5 61770291 + HSD17B4 chr5 118792010 + Exonic hg19 BRCA TCGA-A8-A08L-01A 2 0 In-Frame Intra-chr q12.1 q23.1 23044 ChimerSeq STARFusion TCGA_RNA-Seq TMED2-MTCP1 TMED2 chr12 124074996 + MTCP1 chrX 154293812 - Exonic hg19 BRCA TCGA-A8-A08L-01A 2 0 Out-of-frame Inter-chr q24.31 q28 23045 ChimerSeq STARFusion TCGA_RNA-Seq UBR5-SSTR5 UBR5 chr8 103424401 - SSTR5 chr16 1128842 + Exonic hg19 BRCA TCGA-D8-A27L-01A 11 22 CDS-5'UTR Inter-chr q22.3 Oncogene p13.3 Seq+ 23046 ChimerSeq STARFusion TCGA_RNA-Seq CNOT2-NUP107 CNOT2 chr12 70637260 + NUP107 chr12 69090599 + Exonic hg19 BRCA TCGA-A8-A08F-01A 163 32 5'UTR-CDS Intra-chr q15 q15 Seq+ 23047 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-LOC100507412 ZFAND3 chr6 37787792 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-A8-A08F-01A 43 153 CDS-5'UTR Inter-chr p21.2 23048 ChimerSeq STARFusion TCGA_RNA-Seq SCYL1-MALAT1 SCYL1 chr11 65305795 + MALAT1 chr11 65273857 + Exonic hg19 BRCA TCGA-A8-A08F-01A 24 14 CDS-5'UTR Intra-chr q13.1 Other:SCY1 Tumor suppressor gene q13.1 23049 ChimerSeq STARFusion TCGA_RNA-Seq LRP8-RAD51C LRP8 chr1 53720789 - RAD51C chr17 56772292 + Exonic hg19 BRCA TCGA-A8-A08F-01A 12 48 In-Frame Inter-chr p32.3 q22 Tumor suppressor gene Seq+ 23050 ChimerSeq STARFusion TCGA_RNA-Seq TAF6L-GLYATL1 TAF6L chr11 62538962 + GLYATL1 chr11 58722243 + Exonic hg19 BRCA TCGA-A8-A08F-01A 3 18 5'UTR-CDS Intra-chr q12.3 q12.1 Seq+ 23051 ChimerSeq STARFusion TCGA_RNA-Seq RDH13-RUSC1 RDH13 chr19 55568021 - RUSC1 chr1 155297941 + Exonic hg19 BRCA TCGA-A8-A08F-01A 3 7 Out-of-frame Inter-chr q22 Seq+ 23052 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R12A-NDUFAF2 PPP1R12A chr12 80226112 - NDUFAF2 chr5 60368952 + Exonic hg19 BRCA TCGA-A8-A08F-01A 3 6 Out-of-frame Inter-chr q21.31 q12.1 Seq+ 23053 ChimerSeq STARFusion TCGA_RNA-Seq LIN7A-TRHDE LIN7A chr12 81331420 - TRHDE chr12 72680461 + Exonic hg19 BRCA TCGA-A8-A08F-01A 2 7 Out-of-frame Intra-chr q21.31 q21.1 Seq+ 23054 ChimerSeq STARFusion TCGA_RNA-Seq CTBP2-IL1RAPL1 CTBP2 chr10 126848888 - IL1RAPL1 chrX 29935581 + Exonic hg19 BRCA TCGA-A8-A08F-01A 3 1 5'UTR-CDS Inter-chr q26.13 p21.3 Seq+ 23055 ChimerSeq STARFusion TCGA_RNA-Seq IFT20-SUZ12 IFT20 chr17 26656199 - SUZ12 chr17 30267305 + Exonic hg19 BRCA TCGA-A8-A08F-01A 2 5 Out-of-frame Intra-chr q11.2 q11.2 Tumor suppressor gene Seq+ 23056 ChimerSeq STARFusion TCGA_RNA-Seq TNFSF10-MGP TNFSF10 chr3 172241043 - MGP chr12 15035214 - Exonic hg19 BRCA TCGA-A8-A08F-01A 2 1 Out-of-frame Inter-chr q26.31 p12.3 Seq+ 23057 ChimerSeq STARFusion TCGA_RNA-Seq SEMA3C-AUTS2 SEMA3C chr7 80418622 - AUTS2 chr7 69900738 + Exonic hg19 BRCA TCGA-B6-A0IC-01A 5 5 Out-of-frame Intra-chr q21.11 q11.22 Seq+ 23058 ChimerSeq STARFusion TCGA_RNA-Seq ZNF395-LOC100507412 ZNF395 chr8 28217109 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 63 278 CDS-5'UTR Inter-chr p21.1 Transcription factor 23059 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-FOXRED2 MYH9 chr22 36737415 - FOXRED2 chr22 36889850 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 80 207 In-Frame Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Seq+ 23060 ChimerSeq STARFusion TCGA_RNA-Seq NVL-NEK2 NVL chr1 224437914 - NEK2 chr1 211847855 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 35 67 In-Frame Intra-chr q42.11 q32.3 Other:NEK Seq+ 23061 ChimerSeq STARFusion TCGA_RNA-Seq RAI1-IGF2BP1 RAI1 chr17 17627473 + IGF2BP1 chr17 47076471 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 20 87 5'UTR-CDS Intra-chr p11.2 q21.32 Seq+ 23062 ChimerSeq STARFusion TCGA_RNA-Seq CDC5L-PITPNC1 CDC5L chr6 44397647 + PITPNC1 chr17 65528918 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 14 81 5'UTR-CDS Inter-chr p21.1 Transcription factor q24.2 Seq+ 23063 ChimerSeq STARFusion TCGA_RNA-Seq RAI1-IGF2BP1 RAI1 chr17 17627473 + IGF2BP1 chr17 47102980 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 9 87 5'UTR-CDS Intra-chr p11.2 q21.32 Seq+ 23064 ChimerSeq STARFusion TCGA_RNA-Seq RHOH-N4BP2 RHOH chr4 40198920 + N4BP2 chr4 40098847 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 20 38 5'UTR-5'UTR Intra-chr p14 Oncogene p14 Seq+ 23065 ChimerSeq STARFusion TCGA_RNA-Seq WRB-NLK WRB chr21 40752412 + NLK chr17 26490569 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 12 34 Out-of-frame Inter-chr q22.2 q11.2 CMGC:MAPK Seq+ 23066 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT3-KSR1 AGPAT3 chr21 45323900 + KSR1 chr17 25915501 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 14 22 5'UTR-CDS Inter-chr q22.3 q11.2 TKL:RAF Seq+ 23067 ChimerSeq STARFusion TCGA_RNA-Seq CHFR-OSBPL8 CHFR chr12 133463782 - OSBPL8 chr12 76881398 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 13 11 CDS-5'UTR Intra-chr q24.33 Tumor suppressor gene q21.2 Seq+ 23068 ChimerSeq STARFusion TCGA_RNA-Seq STAU2-MSI2 STAU2 chr8 74650519 - MSI2 chr17 55334459 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 8 18 Out-of-frame Inter-chr q21.11 q22 Seq+ 23069 ChimerSeq STARFusion TCGA_RNA-Seq POLA1-MAP3K15 POLA1 chrX 24906239 + MAP3K15 chrX 19428091 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 6 21 In-Frame Intra-chr p22.11 p22.12 Seq+ 23070 ChimerSeq STARFusion TCGA_RNA-Seq REV3L-SOBP REV3L chr6 111726673 - SOBP chr6 107854663 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 9 8 In-Frame Intra-chr q21 q21 Seq+ 23071 ChimerSeq STARFusion TCGA_RNA-Seq RSBN1L-SHANK2 RSBN1L chr7 77379381 + SHANK2 chr11 70319544 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 8 12 Out-of-frame Inter-chr q11.23 q13.4 Seq+ 23072 ChimerSeq STARFusion TCGA_RNA-Seq PEMT-B4GALNT2 PEMT chr17 17425594 - B4GALNT2 chr17 47218609 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 4 26 In-Frame Intra-chr p11.2 q21.32 Seq+ 23073 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPM-CERS4 HNRNPM chr19 8509995 + CERS4 chr19 8315960 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 5 19 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 23074 ChimerSeq STARFusion TCGA_RNA-Seq IL6ST-DHX29 IL6ST chr5 55243321 - DHX29 chr5 54565465 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 2 26 Out-of-frame Intra-chr q11.2 Oncogene q11.2 Seq+ 23075 ChimerSeq STARFusion TCGA_RNA-Seq PPP3CB-CAMK2G PPP3CB chr10 75204483 - CAMK2G chr10 75620647 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 6 4 In-Frame Intra-chr q22.2 q22.2 Seq+ 23076 ChimerSeq STARFusion TCGA_RNA-Seq HEATR6-GALNT13 HEATR6 chr17 58156057 - GALNT13 chr2 155306923 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 5 6 In-Frame Inter-chr q23.1 q23.3 Seq+ 23077 ChimerSeq STARFusion TCGA_RNA-Seq HEATR6-FGF10 HEATR6 chr17 58132876 - FGF10 chr5 44310632 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 4 6 Out-of-frame Inter-chr q23.1 p12 Seq+ 23078 ChimerSeq STARFusion TCGA_RNA-Seq ARSG-CEP112 ARSG chr17 66303852 + CEP112 chr17 64092750 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 3 9 Out-of-frame Intra-chr q24.2 q24.1 Seq+ 23079 ChimerSeq STARFusion TCGA_RNA-Seq LARP4-PTPRM LARP4 chr12 50822873 + PTPRM chr18 8244056 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 4 4 Out-of-frame Inter-chr q13.12 p11.23 Seq+ 23080 ChimerSeq STARFusion TCGA_RNA-Seq ZFP91-RAB6A ZFP91 chr11 58352357 + RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 2 11 Out-of-frame Intra-chr q12.1 Transcription factor q13.4 Seq+ 23081 ChimerSeq STARFusion TCGA_RNA-Seq BRWD1-WDR4 BRWD1 chr21 40608521 - WDR4 chr21 44283706 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 4 2 Out-of-frame Intra-chr q22.2 q22.3 Seq+ 23082 ChimerSeq STARFusion TCGA_RNA-Seq CEP112-LOC200726 CEP112 chr17 64001808 - LOC200726 chr2 207513385 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 2 10 Out-of-frame Inter-chr q24.1 23083 ChimerSeq STARFusion TCGA_RNA-Seq CREB1-FASTKD2 CREB1 chr2 208435045 + FASTKD2 chr2 207651457 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 3 6 Out-of-frame Intra-chr q33.3 Oncogene Transcription factor q33.3 Seq+ 23084 ChimerSeq STARFusion TCGA_RNA-Seq USP22-MYH10 USP22 chr17 20919065 - MYH10 chr17 8508300 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 3 6 Out-of-frame Intra-chr p11.2 p13.1 Seq+ 23085 ChimerSeq STARFusion TCGA_RNA-Seq CYTH3-MAD1L1 CYTH3 chr7 6210166 - MAD1L1 chr7 1938026 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 2 9 In-Frame Intra-chr p22.1 p22.3 Tumor suppressor gene Seq+ 23086 ChimerSeq STARFusion TCGA_RNA-Seq CYTH3-MAD1L1 CYTH3 chr7 6210833 - MAD1L1 chr7 1938026 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 2 9 In-Frame Intra-chr p22.1 p22.3 Tumor suppressor gene Seq+ 23087 ChimerSeq STARFusion TCGA_RNA-Seq DHRS2-GSTM2 DHRS2 chr14 24105981 + GSTM2 chr1 110213909 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 2 7 5'UTR-CDS Inter-chr q11.2 p13.3 23088 ChimerSeq STARFusion TCGA_RNA-Seq ITSN1-WRB ITSN1 chr21 35015019 + WRB chr21 40763695 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 3 2 5'UTR-CDS Intra-chr q22.11 q22.2 Seq+ 23089 ChimerSeq STARFusion TCGA_RNA-Seq CHFR-ZNF605 CHFR chr12 133447310 - ZNF605 chr12 133522383 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 2 5 CDS-5'UTR Intra-chr q24.33 Tumor suppressor gene q24.33 Transcription factor 23090 ChimerSeq STARFusion TCGA_RNA-Seq HELLS-TBC1D12 HELLS chr10 96348147 + TBC1D12 chr10 96281712 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 2 5 In-Frame Intra-chr q23.33 q23.33 Seq+ 23091 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 2 3 In-Frame Intra-chr p11.21 p11.21 23092 ChimerSeq STARFusion TCGA_RNA-Seq NT5M-ZNF652 NT5M chr17 17209957 + ZNF652 chr17 47395345 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 2 2 CDS-5'UTR Intra-chr p11.2 q21.33 Transcription factor Seq+ 23093 ChimerSeq STARFusion TCGA_RNA-Seq ZKSCAN8-CYP2B7P1 ZKSCAN8 chr6 28109807 + CYP2B7P1 chr19 41450236 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 2 0 Out-of-frame Inter-chr p22.1 Transcription factor 23094 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-SP2 WIPF2 chr17 38375744 + SP2 chr17 46000328 + Exonic hg19 BRCA TCGA-EW-A6SD-01A 218 856 5'UTR-CDS Intra-chr q21.2 q21.32 Transcription factor Seq+ 23095 ChimerSeq STARFusion TCGA_RNA-Seq PKP2-DNM1L PKP2 chr12 32993962 - DNM1L chr12 32895523 + Exonic hg19 BRCA TCGA-EW-A6SD-01A 17 60 In-Frame Intra-chr p11.21 p11.21 Seq+ 23096 ChimerSeq STARFusion TCGA_RNA-Seq LRBA-PPARGC1A LRBA chr4 151935579 - PPARGC1A chr4 23886554 - Exonic hg19 BRCA TCGA-EW-A6SD-01A 8 18 In-Frame Intra-chr q31.3 p15.2 Seq+ 23097 ChimerSeq STARFusion TCGA_RNA-Seq SRPK1-ANKRD42 SRPK1 chr6 35888245 - ANKRD42 chr11 82938789 + Exonic hg19 BRCA TCGA-EW-A6SD-01A 3 32 Out-of-frame Inter-chr p21.31 CMGC:SRPK q14.1 Seq+ 23098 ChimerSeq STARFusion TCGA_RNA-Seq TMEM14B-TFAP2A TMEM14B chr6 10749931 + TFAP2A chr6 10400822 - Exonic hg19 BRCA TCGA-EW-A6SD-01A 6 18 In-Frame Intra-chr p24.2 p24.3 Tumor suppressor gene Transcription factor Seq+ 23099 ChimerSeq STARFusion TCGA_RNA-Seq SRPK1-ANKRD42 SRPK1 chr6 35888245 - ANKRD42 chr11 82947446 + Exonic hg19 BRCA TCGA-EW-A6SD-01A 2 32 Out-of-frame Inter-chr p21.31 CMGC:SRPK q14.1 Seq+ 23100 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CUX1 IGH@ chr14 107034732 - CUX1 chr7 101917569 + Exonic hg19 BRCA TCGA-EW-A6SD-01A 9 1 Out-of-frame Inter-chr 32.33 q22.1 Tumor suppressor gene Transcription factor 23101 ChimerSeq STARFusion TCGA_RNA-Seq MSI2-DHX40 MSI2 chr17 55478832 + DHX40 chr17 57643988 + Exonic hg19 BRCA TCGA-EW-A6SD-01A 5 12 Out-of-frame Intra-chr q22 q23.1 Seq+ 23102 ChimerSeq STARFusion TCGA_RNA-Seq PITPNC1-RHOT1 PITPNC1 chr17 65374318 + RHOT1 chr17 30498062 + Exonic hg19 BRCA TCGA-EW-A6SD-01A 4 13 Out-of-frame Intra-chr q24.2 q11.2 Seq+ 23103 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-BMS1P20 IGH@ chr14 106452672 - BMS1P20 chr22 22657593 + Exonic hg19 BRCA TCGA-EW-A6SD-01A 6 4 Out-of-frame Inter-chr 32.33 23104 ChimerSeq STARFusion TCGA_RNA-Seq LINC00993-TACC1P1 LINC00993 chr10 37635757 + TACC1P1 chr10 37811939 + Exonic hg19 BRCA TCGA-EW-A6SD-01A 3 7 Out-of-frame Intra-chr p11.21 p11.21 23105 ChimerSeq STARFusion TCGA_RNA-Seq MSI2-DHX40 MSI2 chr17 55478832 + DHX40 chr17 57650477 + Exonic hg19 BRCA TCGA-EW-A6SD-01A 2 11 In-Frame Intra-chr q22 q23.1 Seq+ 23106 ChimerSeq STARFusion TCGA_RNA-Seq TRAM1-ZFPM2 TRAM1 chr8 71506741 - ZFPM2 chr8 106646474 + Exonic hg19 BRCA TCGA-A8-A097-01A 39 114 In-Frame Intra-chr q13.3 q22.3 Transcription factor Seq+ 23107 ChimerSeq STARFusion TCGA_RNA-Seq TET2-RPS14P7 TET2 chr4 106068136 + RPS14P7 chr4 161739553 + Exonic hg19 BRCA TCGA-A8-A097-01A 19 61 Out-of-frame Intra-chr q24 Oncogene Tumor suppressor gene Transcription factor q32.2 23108 ChimerSeq STARFusion TCGA_RNA-Seq CARD8-BCKDHA CARD8 chr19 48744219 - BCKDHA chr19 41916542 + Exonic hg19 BRCA TCGA-A8-A097-01A 12 33 Out-of-frame Intra-chr q13.33 q13.2 Seq+ 23109 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-MYEOV CTTN chr11 70260758 + MYEOV chr11 69181511 + Exonic hg19 BRCA TCGA-A8-A097-01A 6 23 CDS-3'UTR Intra-chr q13.3 q13.3 Seq+ 23110 ChimerSeq STARFusion TCGA_RNA-Seq USP22-MMS22L USP22 chr17 20945978 - MMS22L chr6 97726774 - Exonic hg19 BRCA TCGA-A8-A097-01A 8 9 Out-of-frame Inter-chr p11.2 q16.1 Seq+ 23111 ChimerSeq STARFusion TCGA_RNA-Seq ANO1-CYP2R1 ANO1 chr11 69924820 + CYP2R1 chr11 14907463 - Exonic hg19 BRCA TCGA-A8-A097-01A 7 11 In-Frame Intra-chr q13.3 p15.2 Seq+ 23112 ChimerSeq STARFusion TCGA_RNA-Seq MARCH2-PLVAP 2019_ 3_ 2_ chr19 8486900 + PLVAP chr19 17477004 - Exonic hg19 BRCA TCGA-A8-A097-01A 5 8 Out-of-frame Intra-chr p13.2 p13.11 Seq+ 23113 ChimerSeq STARFusion TCGA_RNA-Seq LRTOMT-NFIC LRTOMT chr11 71800211 + NFIC chr19 3449012 + Exonic hg19 BRCA TCGA-A8-A097-01A 2 11 In-Frame Inter-chr q13.4 p13.3 Transcription factor Seq+ 23114 ChimerSeq STARFusion TCGA_RNA-Seq CCNF-MALL CCNF chr16 2483068 + MALL chr2 110843334 - Exonic hg19 BRCA TCGA-GM-A3XL-01A 16 57 Out-of-frame Inter-chr p13.3 q13 Seq+ 23115 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-LINGO1 ANKRD11 chr16 89484692 - LINGO1 chr15 77908242 - Exonic hg19 BRCA TCGA-GM-A3XL-01A 11 39 5'UTR-CDS Inter-chr q24.3 q24.3 Seq+ 23116 ChimerSeq STARFusion TCGA_RNA-Seq WARS-MSH6 WARS chr14 100803399 - MSH6 chr2 48025750 + Exonic hg19 BRCA TCGA-GM-A3XL-01A 4 32 In-Frame Inter-chr q32.2 p16.3 Oncogene Seq+ 23117 ChimerSeq STARFusion TCGA_RNA-Seq GUK1-TARBP1 GUK1 chr1 228328064 + TARBP1 chr1 234603396 - Exonic hg19 BRCA TCGA-GM-A3XL-01A 10 7 In-Frame Intra-chr q42.13 q42.2 Seq+ 23118 ChimerSeq STARFusion TCGA_RNA-Seq MAPK1-KCNJ4 MAPK1 chr22 22160139 - KCNJ4 chr22 38824176 - Exonic hg19 BRCA TCGA-GM-A3XL-01A 7 13 CDS-5'UTR Intra-chr q11.22 Oncogene q13.1 Seq+ 23119 ChimerSeq STARFusion TCGA_RNA-Seq SUPT16H-LOC100507412 SUPT16H chr14 21852021 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-GM-A3XL-01A 4 8 CDS-5'UTR Inter-chr q11.2 23120 ChimerSeq STARFusion TCGA_RNA-Seq MOCOS-ELP2 MOCOS chr18 33828963 + ELP2 chr18 33751010 + Exonic hg19 BRCA TCGA-GM-A3XL-01A 2 2 In-Frame Intra-chr q12.2 q12.2 23121 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-RGS22 PVT1 chr8 128951922 + RGS22 chr8 101020797 - Exonic hg19 BRCA TCGA-A2-A04Y-01A 37 153 5'UTR-CDS Intra-chr q24.21 q22.2 Seq+ 23122 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-RGS22 PVT1 chr8 128903244 + RGS22 chr8 101020797 - Exonic hg19 BRCA TCGA-A2-A04Y-01A 6 153 5'UTR-CDS Intra-chr q24.21 q22.2 Seq+ 23123 ChimerSeq STARFusion TCGA_RNA-Seq LRP12-VPS13B LRP12 chr8 105601047 - VPS13B chr8 100025988 + Exonic hg19 BRCA TCGA-A2-A04Y-01A 11 10 CDS-5'UTR Intra-chr q22.3 q22.2 Seq+ 23124 ChimerSeq STARFusion TCGA_RNA-Seq RBM38-PABPC1 RBM38 chr20 55968389 + PABPC1 chr8 101721959 - Exonic hg19 BRCA TCGA-A2-A04Y-01A 2 1 Out-of-frame Inter-chr q13.31 Tumor suppressor gene q22.3 23125 ChimerSeq STARFusion TCGA_RNA-Seq SCAMP1-PAPD4 SCAMP1 chr5 77656552 + PAPD4 chr5 78964715 + Exonic hg19 BRCA TCGA-A2-A04Y-01A 2 1 In-Frame Intra-chr q14.1 q14.1 23126 ChimerSeq STARFusion TCGA_RNA-Seq MFSD10-ATAD3B MFSD10 chr4 2933552 - ATAD3B chr1 1425637 + Exonic hg19 BRCA TCGA-AC-A2QJ-01A 2 1 In-Frame Inter-chr p16.3 p36.33 Seq+ 23127 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-PIP5K1P1 KCTD20 chr6 36457999 + PIP5K1P1 chr6 7987766 + Exonic hg19 BRCA TCGA-D8-A73U-01A 11 0 Out-of-frame Intra-chr p21.31 p24.3 23128 ChimerSeq STARFusion TCGA_RNA-Seq TXNDC16-GPR137C TXNDC16 chr14 52936755 - GPR137C chr14 53098878 + Exonic hg19 BRCA TCGA-C8-A26V-01A 9 18 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 23129 ChimerSeq STARFusion TCGA_RNA-Seq ERO1L-TXNDC16 ERO1L chr14 53162086 - TXNDC16 chr14 52937398 - Exonic hg19 BRCA TCGA-C8-A26V-01A 3 12 Out-of-frame Intra-chr q22.1 Seq+ 23130 ChimerSeq STARFusion TCGA_RNA-Seq COG6-MAPK8 COG6 chr13 40235018 + MAPK8 chr10 49639236 + Exonic hg19 BRCA TCGA-C8-A26V-01A 2 12 Out-of-frame Inter-chr q14.11 q11.22 Oncogene Seq+ 23131 ChimerSeq STARFusion TCGA_RNA-Seq MPPE1-PIEZO2 MPPE1 chr18 11889386 - PIEZO2 chr18 10871413 - Exonic hg19 BRCA TCGA-C8-A26V-01A 3 2 In-Frame Intra-chr p11.21 p11.21 Seq+ 23132 ChimerSeq STARFusion TCGA_RNA-Seq CADM2-FHIT CADM2 chr3 85851346 + FHIT chr3 60522712 - Exonic hg19 BRCA TCGA-C8-A26V-01A 2 5 5'UTR-5'UTR Intra-chr p12.1 Tumor suppressor gene p14.2 Tumor suppressor gene Seq+ 23133 ChimerSeq STARFusion TCGA_RNA-Seq ERO1L-GPR137C ERO1L chr14 53162086 - GPR137C chr14 53098878 + Exonic hg19 BRCA TCGA-C8-A26V-01A 2 4 In-Frame Intra-chr q22.1 23134 ChimerSeq STARFusion TCGA_RNA-Seq TBX3-MLPH TBX3 chr12 115109226 - MLPH chr2 238462721 + Exonic hg19 BRCA TCGA-BH-A0E7-01A 9 1 Out-of-frame Inter-chr q24.21 Transcription factor q37.3 23135 ChimerSeq STARFusion TCGA_RNA-Seq MACROD1-PITPNM1 MACROD1 chr11 63918711 - PITPNM1 chr11 67269557 - Exonic hg19 BRCA TCGA-AC-A4ZE-01A 55 227 In-Frame Intra-chr q13.1 q13.2 Seq+ 23136 ChimerSeq STARFusion TCGA_RNA-Seq MACROD1-PITPNM1 MACROD1 chr11 63918711 - PITPNM1 chr11 67267892 - Exonic hg19 BRCA TCGA-AC-A4ZE-01A 12 227 In-Frame Intra-chr q13.1 q13.2 Seq+ 23137 ChimerSeq STARFusion TCGA_RNA-Seq ALDH3B2-TENM4 ALDH3B2 chr11 67441907 - TENM4 chr11 78433962 - Exonic hg19 BRCA TCGA-AC-A4ZE-01A 15 39 Out-of-frame Intra-chr q13.2 q14.1 Seq+ 23138 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-OTUB1 UVRAG chr11 75623083 + OTUB1 chr11 63764002 + Exonic hg19 BRCA TCGA-AC-A4ZE-01A 15 31 Out-of-frame Intra-chr q13.5 Tumor suppressor gene q13.1 Seq+ 23139 ChimerSeq STARFusion TCGA_RNA-Seq SPTBN2-PRIM2 SPTBN2 chr11 66472069 - PRIM2 chr6 57467080 + Exonic hg19 BRCA TCGA-AC-A4ZE-01A 6 5 Out-of-frame Inter-chr q13.2 p11.2 Seq+ 23140 ChimerSeq STARFusion TCGA_RNA-Seq SHANK2-SPTBN2 SHANK2 chr11 70544793 - SPTBN2 chr11 66455389 - Exonic hg19 BRCA TCGA-AC-A4ZE-01A 5 4 In-Frame Intra-chr q13.4 q13.2 Seq+ 23141 ChimerSeq STARFusion TCGA_RNA-Seq NCK1-RAB6B NCK1 chr3 136581161 + RAB6B chr3 133560507 - Exonic hg19 BRCA TCGA-AO-A0J4-01A 6 9 5'UTR-CDS Intra-chr q22.3 q22.1 Seq+ 23142 ChimerSeq STARFusion TCGA_RNA-Seq UBA2-PEPD UBA2 chr19 34919475 + PEPD chr19 33904549 - Exonic hg19 BRCA TCGA-AO-A0J4-01A 5 10 Out-of-frame Intra-chr q13.11 q13.11 Seq+ 23143 ChimerSeq STARFusion TCGA_RNA-Seq C8orf76-NKAIN3 C8orf76 chr8 124238740 - NKAIN3 chr8 63492098 + Exonic hg19 BRCA TCGA-AO-A0J4-01A 4 9 In-Frame Intra-chr q24.13 q12.3 Seq+ 23144 ChimerSeq STARFusion TCGA_RNA-Seq ABI1-C10orf68 ABI1 chr10 27057781 - C10orf68 chr10 33067905 + Exonic hg19 BRCA TCGA-AO-A0J4-01A 2 14 Out-of-frame Intra-chr p12.1 23145 ChimerSeq STARFusion TCGA_RNA-Seq NCK1-RAB6B NCK1 chr3 136581195 + RAB6B chr3 133560507 - Exonic hg19 BRCA TCGA-AO-A0J4-01A 2 9 5'UTR-CDS Intra-chr q22.3 q22.1 Seq+ 23146 ChimerSeq STARFusion TCGA_RNA-Seq ADAM10-PLAC9 ADAM10 chr15 59041679 - PLAC9 chr10 81901838 + Exonic hg19 BRCA TCGA-C8-A8HP-01A 20 123 3'UTR-CDS Inter-chr q21.3 q22.3 Seq+ 23147 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD12-C10orf11 ANKRD12 chr18 9136963 + C10orf11 chr10 77818424 + Exonic hg19 BRCA TCGA-C8-A8HP-01A 14 51 5'UTR-CDS Inter-chr p11.22 Seq+ 23148 ChimerSeq STARFusion TCGA_RNA-Seq MED29-MYO1D MED29 chr19 39884277 + MYO1D chr17 31076024 - Exonic hg19 BRCA TCGA-C8-A8HP-01A 7 16 In-Frame Inter-chr q13.2 q11.2 Seq+ 23149 ChimerSeq STARFusion TCGA_RNA-Seq PRPF6-SDC4 PRPF6 chr20 62626445 + SDC4 chr20 43964560 - Exonic hg19 BRCA TCGA-C8-A8HP-01A 3 13 In-Frame Intra-chr q13.33 q13.12 Seq+ 23150 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-SDF4 ERBB2 chr17 37856564 + SDF4 chr1 1159348 - Exonic hg19 BRCA TCGA-C8-A8HP-01A 2 9 Out-of-frame Inter-chr q12 Oncogene p36.33 Seq+ 23151 ChimerSeq STARFusion TCGA_RNA-Seq ZFP91-RAB6A ZFP91 chr11 58352357 + RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-A8-A092-01A 4 29 Out-of-frame Intra-chr q12.1 Transcription factor q13.4 Seq+ 23152 ChimerSeq STARFusion TCGA_RNA-Seq USP22-MYH10 USP22 chr17 20919065 - MYH10 chr17 8508300 - Exonic hg19 BRCA TCGA-A8-A092-01A 7 13 Out-of-frame Intra-chr p11.2 p13.1 Seq+ 23153 ChimerSeq STARFusion TCGA_RNA-Seq PABPC1-RLIM PABPC1 chr8 101717154 - RLIM chrX 73803072 - Exonic hg19 BRCA TCGA-A8-A092-01A 3 19 CDS-3'UTR Inter-chr q22.3 q13.2 23154 ChimerSeq STARFusion TCGA_RNA-Seq MRPL27-TMEM99 MRPL27 chr17 48450492 - TMEM99 chr17 38989367 + Exonic hg19 BRCA TCGA-A8-A092-01A 5 2 CDS-5'UTR Intra-chr q21.33 q21.2 Seq+ 23155 ChimerSeq STARFusion TCGA_RNA-Seq TOMM20-LOC493754 TOMM20 chr1 235291913 - LOC493754 chr7 66019143 - Exonic hg19 BRCA TCGA-A8-A092-01A 4 1 Out-of-frame Inter-chr q42.3 23156 ChimerSeq STARFusion TCGA_RNA-Seq MRPL48-DTX4 MRPL48 chr11 73536841 + DTX4 chr11 58972149 + Exonic hg19 BRCA TCGA-A8-A092-01A 3 3 In-Frame Intra-chr q13.4 q12.1 Seq+ 23157 ChimerSeq STARFusion TCGA_RNA-Seq CHD9-SPG7 CHD9 chr16 53191453 + SPG7 chr16 89590414 + Exonic hg19 BRCA TCGA-A8-A092-01A 2 6 Out-of-frame Intra-chr q12.2 q24.3 Seq+ 23158 ChimerSeq STARFusion TCGA_RNA-Seq CHPT1-MYBPC1 CHPT1 chr12 102091912 + MYBPC1 chr12 102061510 + Exonic hg19 BRCA TCGA-A7-A6VY-01A 17 65 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 23159 ChimerSeq STARFusion TCGA_RNA-Seq UBXN4-R3HDM1 UBXN4 chr2 136533921 + R3HDM1 chr2 136437743 + Exonic hg19 BRCA TCGA-A7-A6VY-01A 8 48 In-Frame Intra-chr q21.3 q21.3 Seq+ 23160 ChimerSeq STARFusion TCGA_RNA-Seq FAM83B-LOC728558 FAM83B chr6 54792430 + LOC728558 chr10 97636417 - Exonic hg19 BRCA TCGA-A7-A6VY-01A 6 34 CDS-3'UTR Inter-chr p12.1 23161 ChimerSeq STARFusion TCGA_RNA-Seq ARMC7-KCTD2 ARMC7 chr17 73125836 + KCTD2 chr17 73061891 + Exonic hg19 BRCA TCGA-A7-A6VY-01A 3 29 Out-of-frame Intra-chr q25.1 q25.1 23162 ChimerSeq STARFusion TCGA_RNA-Seq USP32-ARHGAP39 USP32 chr17 58422842 - ARHGAP39 chr8 145831080 - Exonic hg19 BRCA TCGA-A7-A6VY-01A 7 13 CDS-5'UTR Inter-chr q23.2 q24.3 Seq+ 23163 ChimerSeq STARFusion TCGA_RNA-Seq SMAP2-FBXO42 SMAP2 chr1 40839895 + FBXO42 chr1 16583254 - Exonic hg19 BRCA TCGA-A7-A6VY-01A 2 5 In-Frame Intra-chr p34.2 p36.13 Seq+ 23164 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-MYEOV UVRAG chr11 75572825 + MYEOV chr11 69181511 + Exonic hg19 BRCA TCGA-A2-A0YF-01A 26 63 CDS-3'UTR Intra-chr q13.5 Tumor suppressor gene q13.3 Seq+ 23165 ChimerSeq STARFusion TCGA_RNA-Seq STX5-BSCL2 STX5 chr11 62592508 - BSCL2 chr11 62462183 - Exonic hg19 BRCA TCGA-A2-A0YF-01A 7 39 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 23166 ChimerSeq STARFusion TCGA_RNA-Seq STX5-BSCL2 STX5 chr11 62592497 - BSCL2 chr11 62462183 - Exonic hg19 BRCA TCGA-A2-A0YF-01A 6 39 CDS-3'UTR Intra-chr q12.3 q12.3 Seq+ 23167 ChimerSeq STARFusion TCGA_RNA-Seq ARRB1-MYEOV ARRB1 chr11 74992119 - MYEOV chr11 69181807 + Exonic hg19 BRCA TCGA-A2-A0YF-01A 5 18 CDS-3'UTR Intra-chr q13.4 q13.3 Seq+ 23168 ChimerSeq STARFusion TCGA_RNA-Seq ARRB1-MYEOV ARRB1 chr11 74992119 - MYEOV chr11 69181511 + Exonic hg19 BRCA TCGA-A2-A0YF-01A 3 17 CDS-3'UTR Intra-chr q13.4 q13.3 Seq+ 23169 ChimerSeq STARFusion TCGA_RNA-Seq PSPC1-ANKRD26P3 PSPC1 chr13 20356526 - ANKRD26P3 chr13 19838408 - Exonic hg19 BRCA TCGA-GM-A3NW-01A 3 12 3'UTR-3'UTR Intra-chr q12.11 q12.11 23170 ChimerSeq STARFusion TCGA_RNA-Seq OXCT1-DLEU2 OXCT1 chr5 41840553 - DLEU2 chr13 50571555 - Exonic hg19 BRCA TCGA-GM-A3NW-01A 3 8 CDS-3'UTR Inter-chr p13.1 q14.2 Tumor suppressor gene Seq+ 23171 ChimerSeq STARFusion TCGA_RNA-Seq PROSC-DDHD2 PROSC chr8 37633534 + DDHD2 chr8 38090505 + Exonic hg19 BRCA TCGA-GM-A3NW-01A 2 10 CDS-5'UTR Intra-chr p11.23 Seq+ 23172 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-SPTBN2 PPP6R3 chr11 68228295 + SPTBN2 chr11 66483452 - Exonic hg19 BRCA TCGA-GM-A3NW-01A 2 6 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 23173 ChimerSeq STARFusion TCGA_RNA-Seq TENM4-LOC100130964 TENM4 chr11 78775783 - LOC100130964 chr8 39433100 + Exonic hg19 BRCA TCGA-GM-A3NW-01A 2 0 Out-of-frame Inter-chr q14.1 23174 ChimerSeq STARFusion TCGA_RNA-Seq H3F3B-TRIM47 H3F3B chr17 73774187 - TRIM47 chr17 73874585 - Exonic hg19 BRCA TCGA-LL-A5YM-01A 171 291 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 23175 ChimerSeq STARFusion TCGA_RNA-Seq COL1A1-CPB1 COL1A1 chr17 48261893 - CPB1 chr3 148577674 + Exonic hg19 BRCA TCGA-LL-A5YM-01A 3 4 Out-of-frame Inter-chr q21.33 Oncogene q24 Seq+ 23176 ChimerSeq STARFusion TCGA_RNA-Seq ZNF701-PSMA7 ZNF701 chr19 53073583 + PSMA7 chr20 60716000 - Exonic hg19 BRCA TCGA-UL-AAZ6-01A 49 9 5'UTR-CDS Inter-chr q13.41 Transcription factor q13.33 Seq+ 23177 ChimerSeq STARFusion TCGA_RNA-Seq CACNB1-TANC2 CACNB1 chr17 37347727 - TANC2 chr17 61151304 + Exonic hg19 BRCA TCGA-UL-AAZ6-01A 16 31 Out-of-frame Intra-chr q12 q23.2 Seq+ 23178 ChimerSeq STARFusion TCGA_RNA-Seq RABEP1-LOC100130950 RABEP1 chr17 5235447 + LOC100130950 chr17 5126612 + Exonic hg19 BRCA TCGA-UL-AAZ6-01A 11 28 CDS-5'UTR Intra-chr p13.2 23179 ChimerSeq STARFusion TCGA_RNA-Seq PSMD8-MAP3K10 PSMD8 chr19 38867094 + MAP3K10 chr19 40710392 + Exonic hg19 BRCA TCGA-UL-AAZ6-01A 6 12 In-Frame Intra-chr q13.2 q13.2 Seq+ 23180 ChimerSeq STARFusion TCGA_RNA-Seq PRKCZ-GABRD PRKCZ chr1 1991030 + GABRD chr1 1956381 + Exonic hg19 BRCA TCGA-UL-AAZ6-01A 6 11 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 23181 ChimerSeq STARFusion TCGA_RNA-Seq DUSP14-HEATR6 DUSP14 chr17 35850058 + HEATR6 chr17 58123591 - Exonic hg19 BRCA TCGA-UL-AAZ6-01A 7 5 Out-of-frame Intra-chr q12 q23.1 Seq+ 23182 ChimerSeq STARFusion TCGA_RNA-Seq CYFIP1-ACACA CYFIP1 chr15 22935964 + ACACA chr17 35634007 - Exonic hg19 BRCA TCGA-UL-AAZ6-01A 6 7 In-Frame Inter-chr q11.2 Seq+ 23183 ChimerSeq STARFusion TCGA_RNA-Seq DUSP14-HEATR6 DUSP14 chr17 35850058 + HEATR6 chr17 58121496 - Exonic hg19 BRCA TCGA-UL-AAZ6-01A 5 5 Out-of-frame Intra-chr q12 q23.1 Seq+ 23184 ChimerSeq STARFusion TCGA_RNA-Seq APPBP2-ZNF345 APPBP2 chr17 58556509 - ZNF345 chr19 37383720 + Exonic hg19 BRCA TCGA-UL-AAZ6-01A 3 12 CDS-5'UTR Inter-chr q23.2 q13.12 Transcription factor Seq+ 23185 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0319L-LOC727924 KIAA0319L chr1 36019951 - LOC727924 chr15 22370998 + Exonic hg19 BRCA TCGA-UL-AAZ6-01A 4 7 CDS-5'UTR Inter-chr p34.3 23186 ChimerSeq STARFusion TCGA_RNA-Seq LENG8-SIPA1L3 LENG8 chr19 54969700 + SIPA1L3 chr19 38631824 + Exonic hg19 BRCA TCGA-UL-AAZ6-01A 4 7 In-Frame Intra-chr q13.13 Seq+ 23187 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K10-PCMTD2 MAP3K10 chr19 40704462 + PCMTD2 chr20 62904574 + Exonic hg19 BRCA TCGA-UL-AAZ6-01A 2 10 Out-of-frame Inter-chr q13.2 Seq+ 23188 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP8-PRR5 ARHGAP8 chr22 45182486 + PRR5 chr22 45098372 + Exonic hg19 BRCA TCGA-UL-AAZ6-01A 3 5 Out-of-frame Intra-chr q13.31 q13.31 Tumor suppressor gene 23189 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-GDPD1 BCAS3 chr17 59115415 + GDPD1 chr17 57322775 + Exonic hg19 BRCA TCGA-UL-AAZ6-01A 3 1 In-Frame Intra-chr q23.2 q22 23190 ChimerSeq STARFusion TCGA_RNA-Seq INTS2-ACACA INTS2 chr17 59996761 - ACACA chr17 35726430 - Exonic hg19 BRCA TCGA-UL-AAZ6-01A 2 4 CDS-5'UTR Intra-chr q23.2 Seq+ 23191 ChimerSeq STARFusion TCGA_RNA-Seq OGFOD1-NUP93 OGFOD1 chr16 56487320 + NUP93 chr16 56852576 + Exonic hg19 BRCA TCGA-AR-A2LR-01A 18 34 In-Frame Intra-chr q13 q13 Seq+ 23192 ChimerSeq STARFusion TCGA_RNA-Seq CLIC1-HIST1H2BC CLIC1 chr6 31701343 - HIST1H2BC chr6 26115363 - Exonic hg19 BRCA TCGA-AR-A2LR-01A 18 28 CDS-3'UTR Intra-chr p22.2 Seq+ 23193 ChimerSeq STARFusion TCGA_RNA-Seq APP-PSAT1P1 APP chr21 27394156 - PSAT1P1 chr8 50653972 - Exonic hg19 BRCA TCGA-AR-A2LR-01A 9 62 Out-of-frame Inter-chr q21.3 q11.21 23194 ChimerSeq STARFusion TCGA_RNA-Seq UAP1-BCL9 UAP1 chr1 162536138 + BCL9 chr1 147090622 + Exonic hg19 BRCA TCGA-AR-A2LR-01A 15 27 Out-of-frame Intra-chr q23.3 q21.2 Oncogene Seq+ 23195 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-CASC11 PVT1 chr8 128903244 + CASC11 chr8 128746205 - Exonic hg19 BRCA TCGA-AR-A2LR-01A 13 27 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 23196 ChimerSeq STARFusion TCGA_RNA-Seq ZMYM4-UTP11L ZMYM4 chr1 35791006 + UTP11L chr1 38488371 + Exonic hg19 BRCA TCGA-AR-A2LR-01A 11 31 Out-of-frame Intra-chr p34.3 Seq+ 23197 ChimerSeq STARFusion TCGA_RNA-Seq AGAP1-ZC2HC1A AGAP1 chr2 236403493 + ZC2HC1A chr8 79627456 + Exonic hg19 BRCA TCGA-AR-A2LR-01A 13 15 Out-of-frame Inter-chr q37.2 q21.13 Seq+ 23198 ChimerSeq STARFusion TCGA_RNA-Seq CLCN3-UBE2D3 CLCN3 chr4 170557239 + UBE2D3 chr4 103731012 - Exonic hg19 BRCA TCGA-AR-A2LR-01A 9 21 Out-of-frame Intra-chr q33 q24 Seq+ 23199 ChimerSeq STARFusion TCGA_RNA-Seq ZNF480-CLC ZNF480 chr19 52800476 + CLC chr19 40229099 - Exonic hg19 BRCA TCGA-AR-A2LR-01A 11 1 5'UTR-5'UTR Intra-chr q13.41 Transcription factor q13.2 23200 ChimerSeq STARFusion TCGA_RNA-Seq PRKAG2-RHEB PRKAG2 chr7 151292431 - RHEB chr7 151188100 - Exonic hg19 BRCA TCGA-AR-A2LR-01A 7 14 Out-of-frame Intra-chr q36.1 q36.1 Oncogene 23201 ChimerSeq STARFusion TCGA_RNA-Seq GNPDA2-GRID2 GNPDA2 chr4 44728491 - GRID2 chr4 94316758 + Exonic hg19 BRCA TCGA-AR-A2LR-01A 7 11 5'UTR-CDS Intra-chr p12 q22.1 Seq+ 23202 ChimerSeq STARFusion TCGA_RNA-Seq MIEF2-RAI1 MIEF2 chr17 18168078 + RAI1 chr17 17707070 + Exonic hg19 BRCA TCGA-AR-A2LR-01A 4 15 Out-of-frame Intra-chr p11.2 Seq+ 23203 ChimerSeq STARFusion TCGA_RNA-Seq MIEF2-RAI1 MIEF2 chr17 18166562 + RAI1 chr17 17707070 + Exonic hg19 BRCA TCGA-AR-A2LR-01A 3 15 Out-of-frame Intra-chr p11.2 Seq+ 23204 ChimerSeq STARFusion TCGA_RNA-Seq GALNT2-PRKCQ GALNT2 chr1 230203153 + PRKCQ chr10 6506366 - Exonic hg19 BRCA TCGA-AR-A2LR-01A 4 5 In-Frame Inter-chr q42.13 p15.1 Seq+ 23205 ChimerSeq STARFusion TCGA_RNA-Seq COL16A1-ATF7IP COL16A1 chr1 32130773 - ATF7IP chr12 14576843 + Exonic hg19 BRCA TCGA-AR-A2LR-01A 3 8 CDS-5'UTR Inter-chr p35.2 p13.1 Seq+ 23206 ChimerSeq STARFusion TCGA_RNA-Seq BCL3-IGSF23 BCL3 chr19 45252303 + IGSF23 chr19 45138701 + Exonic hg19 BRCA TCGA-AR-A2LR-01A 3 6 Out-of-frame Intra-chr q13.32 Oncogene q13.31 Seq+ 23207 ChimerSeq STARFusion TCGA_RNA-Seq CCNY-AKAP10 CCNY chr10 35626135 + AKAP10 chr17 19871774 - Exonic hg19 BRCA TCGA-AR-A2LR-01A 3 6 In-Frame Inter-chr p11.21 p11.2 Seq+ 23208 ChimerSeq STARFusion TCGA_RNA-Seq C16orf95-GABRA3 C16orf95 chr16 87336259 - GABRA3 chrX 151514174 - Exonic hg19 BRCA TCGA-AR-A2LR-01A 3 5 3'UTR-CDS Inter-chr q24.2 q28 Seq+ 23209 ChimerSeq STARFusion TCGA_RNA-Seq DHCR7-PRKRIR DHCR7 chr11 71152273 - PRKRIR chr11 76077016 - Exonic hg19 BRCA TCGA-AR-A2LR-01A 2 7 In-Frame Intra-chr q13.4 23210 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-CASC8 PVT1 chr8 128903244 + CASC8 chr8 128433208 - Exonic hg19 BRCA TCGA-AR-A2LR-01A 2 5 Out-of-frame Intra-chr q24.21 q24.21 23211 ChimerSeq STARFusion TCGA_RNA-Seq MIEF2-ANKRD30A MIEF2 chr17 18166562 + ANKRD30A chr10 37440988 + Exonic hg19 BRCA TCGA-AR-A2LR-01A 2 4 Out-of-frame Inter-chr p11.21 Seq+ 23212 ChimerSeq STARFusion TCGA_RNA-Seq PTPN3-EPB41L4B PTPN3 chr9 112143932 - EPB41L4B chr9 112042201 - Exonic hg19 BRCA TCGA-4H-AAAK-01A 3 2 In-Frame Intra-chr q31.3 q31.3 23213 ChimerSeq STARFusion TCGA_RNA-Seq IGSF3-KDM2A IGSF3 chr1 117208906 - KDM2A chr11 66947550 + Exonic hg19 BRCA TCGA-BH-A0W3-01A 23 38 Out-of-frame Inter-chr p13.1 q13.2 Transcription factor Seq+ 23214 ChimerSeq STARFusion TCGA_RNA-Seq MAGI3-NOTCH2 MAGI3 chr1 113933971 + NOTCH2 chr1 120539955 - Exonic hg19 BRCA TCGA-BH-A0W3-01A 10 18 In-Frame Intra-chr p13.2 p12 Oncogene Tumor suppressor gene Seq+ 23215 ChimerSeq STARFusion TCGA_RNA-Seq FZD4-LAMTOR1 FZD4 chr11 86665843 - LAMTOR1 chr11 71810302 - Exonic hg19 BRCA TCGA-BH-A0W3-01A 2 36 In-Frame Intra-chr q14.2 q13.4 Seq+ 23216 ChimerSeq STARFusion TCGA_RNA-Seq MAGI3-NOTCH2 MAGI3 chr1 113933971 + NOTCH2 chr1 120529705 - Exonic hg19 BRCA TCGA-BH-A0W3-01A 2 18 In-Frame Intra-chr p13.2 p12 Oncogene Tumor suppressor gene Seq+ 23217 ChimerSeq STARFusion TCGA_RNA-Seq KIF13B-TENM4 KIF13B chr8 28980108 - TENM4 chr11 78387432 - Exonic hg19 BRCA TCGA-A2-A0ES-01A 12 42 Out-of-frame Inter-chr p12 q14.1 Seq+ 23218 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-ZMAT4 UVRAG chr11 75728024 + ZMAT4 chr8 40389757 - Exonic hg19 BRCA TCGA-A2-A0ES-01A 17 18 In-Frame Inter-chr q13.5 Tumor suppressor gene p11.21 Transcription factor Seq+ 23219 ChimerSeq STARFusion TCGA_RNA-Seq C11orf30-UVRAG C11orf30 chr11 76207513 + UVRAG chr11 75715049 + Exonic hg19 BRCA TCGA-A2-A0ES-01A 4 30 In-Frame Intra-chr q13.5 Tumor suppressor gene Seq+ 23220 ChimerSeq STARFusion TCGA_RNA-Seq GLG1-COG4 GLG1 chr16 74640555 - COG4 chr16 70553634 - Exonic hg19 BRCA TCGA-BH-A1F8-01A 24 69 In-Frame Intra-chr q23.1 q22.1 Seq+ 23221 ChimerSeq STARFusion TCGA_RNA-Seq ZNF736-CHMP1A ZNF736 chr7 63797360 + CHMP1A chr16 89713739 - Exonic hg19 BRCA TCGA-BH-A1F8-01A 2 1 In-Frame Inter-chr q11.21 Transcription factor q24.3 23222 ChimerSeq STARFusion TCGA_RNA-Seq ATG5-TMEM200A ATG5 chr6 106773401 - TMEM200A chr6 130761552 + Exonic hg19 BRCA TCGA-AR-A1AU-01A 4 25 5'UTR-5'UTR Intra-chr q21 q23.1 Seq+ 23223 ChimerSeq STARFusion TCGA_RNA-Seq CHD7-ASPH CHD7 chr8 61655656 + ASPH chr8 62596747 - Exonic hg19 BRCA TCGA-AR-A1AU-01A 5 14 Out-of-frame Intra-chr q12.2 q12.3 Seq+ 23224 ChimerSeq STARFusion TCGA_RNA-Seq ATG5-TMEM200A ATG5 chr6 106773401 - TMEM200A chr6 130706318 + Exonic hg19 BRCA TCGA-AR-A1AU-01A 2 25 5'UTR-5'UTR Intra-chr q21 q23.1 Seq+ 23225 ChimerSeq STARFusion TCGA_RNA-Seq SPAG17-PCF11 SPAG17 chr1 118727694 - PCF11 chr11 82872369 + Exonic hg19 BRCA TCGA-AR-A1AU-01A 4 11 In-Frame Inter-chr p12 q14.1 Seq+ 23226 ChimerSeq STARFusion TCGA_RNA-Seq TASP1-HLCS TASP1 chr20 13539655 - HLCS chr21 38334470 - Exonic hg19 BRCA TCGA-AR-A1AU-01A 3 10 CDS-5'UTR Inter-chr p12.1 q22.13 Seq+ 23227 ChimerSeq STARFusion TCGA_RNA-Seq SPAG17-PCF11 SPAG17 chr1 118727694 - PCF11 chr11 82874721 + Exonic hg19 BRCA TCGA-AR-A1AU-01A 2 11 In-Frame Inter-chr p12 q14.1 Seq+ 23228 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC16-PFKL ZDHHC16 chr10 99206110 + PFKL chr21 45731988 + Exonic hg19 BRCA TCGA-A7-A3RF-01A 15 128 5'UTR-5'UTR Inter-chr q24.1 q22.3 Seq+ 23229 ChimerSeq STARFusion TCGA_RNA-Seq LRP2-RN7SL2 LRP2 chr2 169984004 - RN7SL2 chr14 50329499 - Exonic hg19 BRCA TCGA-A7-A3RF-01A 3 15 Out-of-frame Inter-chr q31.1 q21.3 23230 ChimerSeq STARFusion TCGA_RNA-Seq LINC00993-TACC1P1 LINC00993 chr10 37635757 + TACC1P1 chr10 37811939 + Exonic hg19 BRCA TCGA-A7-A3RF-01A 4 7 Out-of-frame Intra-chr p11.21 p11.21 23231 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-CCDC170 ESR1 chr6 152023140 + CCDC170 chr6 151894309 + Exonic hg19 BRCA TCGA-AC-A8OS-01A 4 10 5'UTR-CDS Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 KB Pub Seq+ 23232 ChimerSeq STARFusion TCGA_RNA-Seq FAR1-PSMB7 FAR1 chr11 13690353 + PSMB7 chr9 127119194 - Exonic hg19 BRCA TCGA-E9-A1R0-01A 2 1 5'UTR-CDS Inter-chr p15.3 q33.3 Seq+ 23233 ChimerSeq STARFusion TCGA_RNA-Seq STC2-CAPG STC2 chr5 172750222 - CAPG chr2 85629281 - Exonic hg19 BRCA TCGA-E9-A1R0-01A 2 1 CDS-5'UTR Inter-chr q35.2 p11.2 Tumor suppressor gene 23234 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-POU5F1B PVT1 chr8 128951922 + POU5F1B chr8 128411138 + Exonic hg19 BRCA TCGA-E2-A158-01A 17 96 5'UTR-5'UTR Intra-chr q24.21 q24.21 Transcription factor Seq+ 23235 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-POU5F1B PVT1 chr8 128903244 + POU5F1B chr8 128411138 + Exonic hg19 BRCA TCGA-E2-A158-01A 8 95 5'UTR-5'UTR Intra-chr q24.21 q24.21 Transcription factor Seq+ 23236 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-POU5F1B PVT1 chr8 128951922 + POU5F1B chr8 128427133 + Exonic hg19 BRCA TCGA-E2-A158-01A 4 95 5'UTR-5'UTR Intra-chr q24.21 q24.21 Transcription factor Seq+ 23237 ChimerSeq STARFusion TCGA_RNA-Seq AEBP2-PVT1 AEBP2 chr12 19557058 + PVT1 chr8 128951754 + Exonic hg19 BRCA TCGA-E2-A158-01A 8 71 5'UTR-5'UTR Inter-chr p12.3 Transcription factor q24.21 Seq+ 23238 ChimerSeq STARFusion TCGA_RNA-Seq AEBP2-PVT1 AEBP2 chr12 19557150 + PVT1 chr8 128951754 + Exonic hg19 BRCA TCGA-E2-A158-01A 8 71 5'UTR-5'UTR Inter-chr p12.3 Transcription factor q24.21 Seq+ 23239 ChimerSeq STARFusion TCGA_RNA-Seq AEBP2-PVT1 AEBP2 chr12 19557058 + PVT1 chr8 128944711 + Exonic hg19 BRCA TCGA-E2-A158-01A 6 71 Out-of-frame Inter-chr p12.3 Transcription factor q24.21 Seq+ 23240 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-AEBP2 PVT1 chr8 128806980 + AEBP2 chr12 19653031 + Exonic hg19 BRCA TCGA-E2-A158-01A 5 37 5'UTR-CDS Inter-chr q24.21 p12.3 Transcription factor Seq+ 23241 ChimerSeq STARFusion TCGA_RNA-Seq AHNAK-ST13 AHNAK chr11 62286828 - ST13 chr22 41240913 - Exonic hg19 BRCA TCGA-E2-A158-01A 4 31 Out-of-frame Inter-chr q12.3 Tumor suppressor gene q13.2 Tumor suppressor gene 23242 ChimerSeq STARFusion TCGA_RNA-Seq AHNAK-ST13 AHNAK chr11 62284482 - ST13 chr22 41240913 - Exonic hg19 BRCA TCGA-E2-A158-01A 3 28 Out-of-frame Inter-chr q12.3 Tumor suppressor gene q13.2 Tumor suppressor gene 23243 ChimerSeq STARFusion TCGA_RNA-Seq CYFIP1-TUBGCP5 CYFIP1 chr15 22926065 + TUBGCP5 chr15 22861737 + Exonic hg19 BRCA TCGA-E2-A158-01A 4 13 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 23244 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G3-PPP2R3A EIF4G3 chr1 21503215 - PPP2R3A chr3 135806725 + Exonic hg19 BRCA TCGA-E2-A158-01A 3 16 5'UTR-CDS Inter-chr p36.12 q22.2 Seq+ 23245 ChimerSeq STARFusion TCGA_RNA-Seq LRRC8A-GON4L LRRC8A chr9 131648400 + GON4L chr1 155774932 - Exonic hg19 BRCA TCGA-E2-A158-01A 2 18 5'UTR-CDS Inter-chr q34.11 q22 Seq+ 23246 ChimerSeq STARFusion TCGA_RNA-Seq ASH1L-TBC1D13 ASH1L chr1 155531944 - TBC1D13 chr9 131550613 + Exonic hg19 BRCA TCGA-E2-A158-01A 4 6 5'UTR-CDS Inter-chr q22 Transcription factor q34.11 Seq+ 23247 ChimerSeq STARFusion TCGA_RNA-Seq CYFIP1-TUBGCP5 CYFIP1 chr15 22925899 + TUBGCP5 chr15 22861737 + Exonic hg19 BRCA TCGA-E2-A158-01A 2 13 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 23248 ChimerSeq STARFusion TCGA_RNA-Seq TGIF2-NDRG3 TGIF2 chr20 35202148 + NDRG3 chr20 35299800 - Exonic hg19 BRCA TCGA-LL-A441-01A 89 271 5'UTR-CDS Intra-chr q11.23 Transcription factor q11.23 Seq+ 23249 ChimerSeq STARFusion TCGA_RNA-Seq TGIF2-NDRG3 TGIF2 chr20 35203038 + NDRG3 chr20 35299800 - Exonic hg19 BRCA TCGA-LL-A441-01A 43 271 5'UTR-CDS Intra-chr q11.23 Transcription factor q11.23 Seq+ 23250 ChimerSeq STARFusion TCGA_RNA-Seq TGIF2-NDRG3 TGIF2 chr20 35202055 + NDRG3 chr20 35299800 - Exonic hg19 BRCA TCGA-LL-A441-01A 13 271 5'UTR-CDS Intra-chr q11.23 Transcription factor q11.23 Seq+ 23251 ChimerSeq STARFusion TCGA_RNA-Seq CLPB-SHANK2 CLPB chr11 72069924 - SHANK2 chr11 70544868 - Exonic hg19 BRCA TCGA-LL-A441-01A 9 27 In-Frame Intra-chr q13.4 q13.4 Seq+ 23252 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-LOH12CR1 ETV6 chr12 11905513 + LOH12CR1 chr12 12588562 + Exonic hg19 BRCA TCGA-LL-A441-01A 5 13 In-Frame Intra-chr p13.2 Tumor suppressor gene Transcription factor Seq+ 23253 ChimerSeq STARFusion TCGA_RNA-Seq RALGAPB-CNBD2 RALGAPB chr20 37101712 + CNBD2 chr20 34618279 + Exonic hg19 BRCA TCGA-LL-A441-01A 6 9 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 23254 ChimerSeq STARFusion TCGA_RNA-Seq TRPC4AP-RALY TRPC4AP chr20 33622926 - RALY chr20 32619328 + Exonic hg19 BRCA TCGA-LL-A441-01A 3 17 CDS-5'UTR Intra-chr q11.22 q11.22 Seq+ 23255 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0232-INPP4B KIAA0232 chr4 6826411 + INPP4B chr4 142950067 - Exonic hg19 BRCA TCGA-LL-A441-01A 3 11 Out-of-frame Intra-chr p16.1 q31.21 Tumor suppressor gene Seq+ 23256 ChimerSeq STARFusion TCGA_RNA-Seq WNK1-WNT5B WNK1 chr12 939326 + WNT5B chr12 1740464 + Exonic hg19 BRCA TCGA-LL-A441-01A 2 11 CDS-5'UTR Intra-chr p13.33 p13.33 Seq+ 23257 ChimerSeq STARFusion TCGA_RNA-Seq CLPB-PDE2A CLPB chr11 72069924 - PDE2A chr11 72353370 - Exonic hg19 BRCA TCGA-LL-A441-01A 2 5 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 23258 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-LOC100507412 FCHSD2 chr11 72613588 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-LL-A441-01A 2 4 CDS-5'UTR Inter-chr q13.4 23259 ChimerSeq STARFusion TCGA_RNA-Seq GPBP1L1-TRAPPC9 GPBP1L1 chr1 46152084 - TRAPPC9 chr8 141407844 - Exonic hg19 BRCA TCGA-C8-A8HQ-01A 2 23 5'UTR-CDS Inter-chr p34.1 Transcription factor q24.3 Seq+ 23260 ChimerSeq STARFusion TCGA_RNA-Seq RTN3-NDUFS8 RTN3 chr11 63449250 + NDUFS8 chr11 67799619 + Exonic hg19 BRCA TCGA-C8-A8HQ-01A 3 9 CDS-5'UTR Intra-chr q13.1 q13.2 Seq+ 23261 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-SP140 DGKD chr2 234263320 + SP140 chr2 231101798 + Exonic hg19 BRCA TCGA-A8-A084-01A 5 12 Out-of-frame Intra-chr q37.1 Transcription factor Seq+ 23262 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-CES5A ANKRD11 chr16 89484692 - CES5A chr16 55983814 - Exonic hg19 BRCA TCGA-A8-A084-01A 2 19 5'UTR-CDS Intra-chr q24.3 q12.2 Seq+ 23263 ChimerSeq STARFusion TCGA_RNA-Seq BOK-MYEOV2 BOK chr2 242501891 + MYEOV2 chr2 241066357 - Exonic hg19 BRCA TCGA-A8-A084-01A 2 12 Out-of-frame Intra-chr q37.3 Seq+ 23264 ChimerSeq STARFusion TCGA_RNA-Seq SNED1-HJURP SNED1 chr2 241938467 + HJURP chr2 234752929 - Exonic hg19 BRCA TCGA-A8-A084-01A 3 4 In-Frame Intra-chr q37.3 q37.1 Seq+ 23265 ChimerSeq STARFusion TCGA_RNA-Seq ENPP1-SEC63 ENPP1 chr6 132207864 + SEC63 chr6 108246136 - Exonic hg19 BRCA TCGA-A1-A0SG-01A 3 0 Out-of-frame Intra-chr q23.2 q21 Seq+ 23266 ChimerSeq STARFusion TCGA_RNA-Seq PARP2-ADCK1 PARP2 chr14 20811846 + ADCK1 chr14 78325419 + Exonic hg19 BRCA TCGA-A1-A0SG-01A 2 0 Out-of-frame Intra-chr q11.2 q24.3 Atypical:ABC1 23267 ChimerSeq STARFusion TCGA_RNA-Seq EML4-COX7A2L EML4 chr2 42396776 + COX7A2L chr2 42580483 - Exonic hg19 BRCA TCGA-E9-A245-01A 5 6 Out-of-frame Intra-chr p21 Oncogene p21 Seq+ 23268 ChimerSeq STARFusion TCGA_RNA-Seq LALBA-CSN2 LALBA chr12 48962905 - CSN2 chr4 70823210 - Exonic hg19 BRCA TCGA-AO-A1KO-01A 7 663 Out-of-frame Inter-chr q13.11 Tumor suppressor gene Seq+ 23269 ChimerSeq STARFusion TCGA_RNA-Seq CSN2-LALBA CSN2 chr4 70823211 - LALBA chr12 48962904 - Exonic hg19 BRCA TCGA-AO-A1KO-01A 3 522 Out-of-frame Inter-chr Tumor suppressor gene q13.11 Seq+ 23270 ChimerSeq STARFusion TCGA_RNA-Seq TMED3-KIAA1024 TMED3 chr15 79606347 + KIAA1024 chr15 79748440 + Exonic hg19 BRCA TCGA-AO-A1KO-01A 2 1 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 23271 ChimerSeq STARFusion TCGA_RNA-Seq FDFT1-INTS9 FDFT1 chr8 11660440 + INTS9 chr8 28707790 - Exonic hg19 BRCA TCGA-E2-A15K-01A 5 15 Out-of-frame Intra-chr p23.1 p21.1 Seq+ 23272 ChimerSeq STARFusion TCGA_RNA-Seq NUP155-ZFYVE26 NUP155 chr5 37370923 - ZFYVE26 chr14 68244965 - Exonic hg19 BRCA TCGA-E2-A15K-01A 3 15 Out-of-frame Inter-chr p13.2 q24.1 Seq+ 23273 ChimerSeq STARFusion TCGA_RNA-Seq INTS9-PHYHIP INTS9 chr8 28692809 - PHYHIP chr8 22089516 - Exonic hg19 BRCA TCGA-E2-A15K-01A 3 9 CDS-5'UTR Intra-chr p21.1 p21.3 Seq+ 23274 ChimerSeq STARFusion TCGA_RNA-Seq COX6C-RGS22 COX6C chr8 100905867 - RGS22 chr8 101020797 - Exonic hg19 BRCA TCGA-EW-A1PD-01A 14 80 5'UTR-CDS Intra-chr q22.2 q22.2 Seq+ 23275 ChimerSeq STARFusion TCGA_RNA-Seq COX6C-RGS22 COX6C chr8 100905867 - RGS22 chr8 101051260 - Exonic hg19 BRCA TCGA-EW-A1PD-01A 7 80 5'UTR-CDS Intra-chr q22.2 q22.2 Seq+ 23276 ChimerSeq STARFusion TCGA_RNA-Seq COX6C-RGS22 COX6C chr8 100905671 - RGS22 chr8 101051260 - Exonic hg19 BRCA TCGA-EW-A1PD-01A 2 80 5'UTR-CDS Intra-chr q22.2 q22.2 Seq+ 23277 ChimerSeq STARFusion TCGA_RNA-Seq COX6C-RGS22 COX6C chr8 100905671 - RGS22 chr8 101020797 - Exonic hg19 BRCA TCGA-EW-A1PD-01A 2 80 5'UTR-CDS Intra-chr q22.2 q22.2 Seq+ 23278 ChimerSeq STARFusion TCGA_RNA-Seq PRKAA1-RPL37 PRKAA1 chr5 40798165 - RPL37 chr5 40834708 - Exonic hg19 BRCA TCGA-B6-A0RS-01A 97 401 Out-of-frame Intra-chr p13.1 Tumor suppressor gene p13.1 Seq+ 23279 ChimerSeq STARFusion TCGA_RNA-Seq SHANK2-ANXA13 SHANK2 chr11 70935743 - ANXA13 chr8 124724993 - Exonic hg19 BRCA TCGA-B6-A0RS-01A 49 119 5'UTR-CDS Inter-chr q13.4 q24.13 Seq+ 23280 ChimerSeq STARFusion TCGA_RNA-Seq SHANK2-ANXA13 SHANK2 chr11 70935743 - ANXA13 chr8 124714976 - Exonic hg19 BRCA TCGA-B6-A0RS-01A 8 119 5'UTR-CDS Inter-chr q13.4 q24.13 Seq+ 23281 ChimerSeq STARFusion TCGA_RNA-Seq CREB3L2-ATP6V0A4 CREB3L2 chr7 137564036 - ATP6V0A4 chr7 138434062 - Exonic hg19 BRCA TCGA-B6-A0RS-01A 5 32 3'UTR-CDS Intra-chr q33 Transcription factor q34 Seq+ 23282 ChimerSeq STARFusion TCGA_RNA-Seq XXYLT1-ACAP2 XXYLT1 chr3 194991284 - ACAP2 chr3 195066046 - Exonic hg19 BRCA TCGA-B6-A0RS-01A 7 10 In-Frame Intra-chr q29 q29 Seq+ 23283 ChimerSeq STARFusion TCGA_RNA-Seq C16orf55-DPEP1 C16orf55 chr16 89724829 + DPEP1 chr16 89696713 + Exonic hg19 BRCA TCGA-B6-A0RS-01A 3 16 CDS-5'UTR Intra-chr q24.3 Seq+ 23284 ChimerSeq STARFusion TCGA_RNA-Seq BCL2L11-ACOXL BCL2L11 chr2 111881716 + ACOXL chr2 111875193 + Exonic hg19 BRCA TCGA-B6-A0RS-01A 2 18 Out-of-frame Intra-chr q13 Tumor suppressor gene q13 Seq+ 23285 ChimerSeq STARFusion TCGA_RNA-Seq UPF2-PPP2R5C UPF2 chr10 11984664 - PPP2R5C chr14 102252355 + Exonic hg19 BRCA TCGA-B6-A0RS-01A 2 10 In-Frame Inter-chr p14 q32.31 Tumor suppressor gene Seq+ 23286 ChimerSeq STARFusion TCGA_RNA-Seq CDKAL1-HSP90AA1 CDKAL1 chr6 20535625 + HSP90AA1 chr14 102568422 - Exonic hg19 BRCA TCGA-B6-A0RS-01A 2 5 5'UTR-CDS Inter-chr p22.3 q32.31 Oncogene Seq+ 23287 ChimerSeq STARFusion TCGA_RNA-Seq IQCG-RPL35A IQCG chr3 197686400 - RPL35A chr3 197680874 + Exonic hg19 BRCA TCGA-B6-A0RS-01A 2 1 5'UTR-CDS Intra-chr q29 q29 23288 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-NAP1L4 TMEM123 chr11 102319543 - NAP1L4 chr11 3000467 - Exonic hg19 BRCA TCGA-B6-A0RS-01A 2 0 CDS-5'UTR Intra-chr q22.2 23289 ChimerSeq STARFusion TCGA_RNA-Seq RMDN1-ESRP1 RMDN1 chr8 87519224 - ESRP1 chr8 95674729 + Exonic hg19 BRCA TCGA-AR-A0TY-01A 81 252 Out-of-frame Intra-chr q21.3 q22.1 Tumor suppressor gene Seq+ 23290 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-EFCAB5 TAOK1 chr17 27844674 + EFCAB5 chr17 28418889 + Exonic hg19 BRCA TCGA-AR-A0TY-01A 12 27 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 23291 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-ENPP7 SLC39A11 chr17 71088710 - ENPP7 chr17 77707395 + Exonic hg19 BRCA TCGA-AR-A0TY-01A 3 45 Out-of-frame Intra-chr q25.1 q25.3 Seq+ 23292 ChimerSeq STARFusion TCGA_RNA-Seq TNFRSF10A-BIN3 TNFRSF10A chr8 23069629 - BIN3 chr8 22502316 - Exonic hg19 BRCA TCGA-AR-A0TY-01A 5 22 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.3 Seq+ 23293 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-EFCAB5 TAOK1 chr17 27844674 + EFCAB5 chr17 28434852 + Exonic hg19 BRCA TCGA-AR-A0TY-01A 3 27 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 23294 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-SMARCA4 DNM2 chr19 10829079 + SMARCA4 chr19 11132401 + Exonic hg19 BRCA TCGA-AR-A0TY-01A 6 8 Out-of-frame Intra-chr p13.2 p13.2 Oncogene Tumor suppressor gene Seq+ 23295 ChimerSeq STARFusion TCGA_RNA-Seq NSMAF-DEPTOR NSMAF chr8 59535779 - DEPTOR chr8 120940640 + Exonic hg19 BRCA TCGA-AR-A0TY-01A 3 5 In-Frame Intra-chr q12.1 q24.12 Seq+ 23296 ChimerSeq STARFusion TCGA_RNA-Seq MYBL1-MMP16 MYBL1 chr8 67484717 - MMP16 chr8 89086971 - Exonic hg19 BRCA TCGA-AR-A0TY-01A 2 1 In-Frame Intra-chr q13.1 Transcription factor q21.3 Seq+ 23297 ChimerSeq STARFusion TCGA_RNA-Seq KCNJ3-AIG1 KCNJ3 chr2 155566331 + AIG1 chr6 143605247 + Exonic hg19 BRCA TCGA-AR-A0TY-01A 2 0 Out-of-frame Inter-chr q24.1 q24.2 23298 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHM1P-AATF PLEKHM1P chr17 62817885 - AATF chr17 35345818 + Exonic hg19 BRCA TCGA-AR-A0TY-01A 2 0 3'UTR-CDS Intra-chr 23299 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF37-ETF1 ARHGEF37 chr5 148961187 + ETF1 chr5 137854556 - Exonic hg19 BRCA TCGA-A2-A0EP-01A 4 1 5'UTR-CDS Intra-chr q32 q31.2 Seq+ 23300 ChimerSeq STARFusion TCGA_RNA-Seq HARS-CLINT1 HARS chr5 140070440 - CLINT1 chr5 157221980 - Exonic hg19 BRCA TCGA-A2-A0EP-01A 2 4 Out-of-frame Intra-chr q31.3 q33.3 Seq+ 23301 ChimerSeq STARFusion TCGA_RNA-Seq PRPF4B-CDYL PRPF4B chr6 4021700 + CDYL chr6 4952500 + Exonic hg19 BRCA TCGA-BH-A0HB-01A 17 30 Out-of-frame Intra-chr p25.2 p25.1 Seq+ 23302 ChimerSeq STARFusion TCGA_RNA-Seq PRPF4B-CDYL PRPF4B chr6 4021700 + CDYL chr6 4954132 + Exonic hg19 BRCA TCGA-BH-A0HB-01A 4 30 Out-of-frame Intra-chr p25.2 p25.1 Seq+ 23303 ChimerSeq STARFusion TCGA_RNA-Seq TRIM37-TUBD1 TRIM37 chr17 57181654 - TUBD1 chr17 57937785 - Exonic hg19 BRCA TCGA-BH-A0HB-01A 6 12 Out-of-frame Intra-chr q22 q23.1 Seq+ 23304 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L3-LAMA1 EPB41L3 chr18 5395066 - LAMA1 chr18 7037750 - Exonic hg19 BRCA TCGA-BH-A0HB-01A 4 13 In-Frame Intra-chr p11.31 Tumor suppressor gene p11.31 Seq+ 23305 ChimerSeq STARFusion TCGA_RNA-Seq B3GALTL-MTUS2 B3GALTL chr13 31898032 + MTUS2 chr13 30014120 + Exonic hg19 BRCA TCGA-BH-A0HB-01A 3 5 In-Frame Intra-chr q12.3 Seq+ 23306 ChimerSeq STARFusion TCGA_RNA-Seq TYW1B-GTF2IRD2P1 TYW1B chr7 72242427 - GTF2IRD2P1 chr7 72694143 - Exonic hg19 BRCA TCGA-BH-A0HB-01A 2 5 CDS-5'UTR Intra-chr q11.23 q11.23 Seq+ 23307 ChimerSeq STARFusion TCGA_RNA-Seq PHF21A-CCDC178 PHF21A chr11 46098305 - CCDC178 chr18 30847261 - Exonic hg19 BRCA TCGA-BH-A0BG-01A 13 84 Out-of-frame Inter-chr p11.2 Transcription factor q12.1 Seq+ 23308 ChimerSeq STARFusion TCGA_RNA-Seq PHF21A-CCDC178 PHF21A chr11 46098305 - CCDC178 chr18 30873276 - Exonic hg19 BRCA TCGA-BH-A0BG-01A 10 84 Out-of-frame Inter-chr p11.2 Transcription factor q12.1 Seq+ 23309 ChimerSeq STARFusion TCGA_RNA-Seq TTC39C-LOC441601 TTC39C chr18 21646104 + LOC441601 chr11 50239318 - Exonic hg19 BRCA TCGA-BH-A0BG-01A 3 36 CDS-3'UTR Inter-chr q11.2 23310 ChimerSeq STARFusion TCGA_RNA-Seq NFIX-LRP4 NFIX chr19 13136366 + LRP4 chr11 46924480 - Exonic hg19 BRCA TCGA-BH-A0BG-01A 2 11 In-Frame Inter-chr p13.13 Transcription factor p11.2 Seq+ 23311 ChimerSeq STARFusion TCGA_RNA-Seq LOC100129269-ADORA3 LOC100129269 chr1 112144814 - ADORA3 chr1 112043178 - Exonic hg19 BRCA TCGA-BH-A0BG-01A 2 8 3'UTR-CDS Intra-chr p13.2 23312 ChimerSeq STARFusion TCGA_RNA-Seq C12orf75-ARHGAP26 C12orf75 chr12 105742404 + ARHGAP26 chr5 142500553 + Exonic hg19 BRCA TCGA-BH-A0BG-01A 2 0 In-Frame Inter-chr q23.3 q31.3 23313 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS10-MLLT1 ADAMTS10 chr19 8665812 - MLLT1 chr19 6270770 - Exonic hg19 BRCA TCGA-AC-A2B8-01A 10 34 In-Frame Intra-chr p13.2 p13.3 Seq+ 23314 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1467-EMP1 KIAA1467 chr12 13224330 + EMP1 chr12 13364403 + Exonic hg19 BRCA TCGA-AC-A2B8-01A 2 2 CDS-5'UTR Intra-chr p13.1 Tumor suppressor gene 23315 ChimerSeq STARFusion TCGA_RNA-Seq KLHL26-CD46 KLHL26 chr19 18747947 + CD46 chr1 207930359 + Exonic hg19 BRCA TCGA-AC-A2B8-01A 2 0 Out-of-frame Inter-chr p13.11 q32.2 23316 ChimerSeq STARFusion TCGA_RNA-Seq TOPBP1-RYK TOPBP1 chr3 133356720 - RYK chr3 133878217 - Exonic hg19 BRCA TCGA-AC-A2B8-01A 2 0 In-Frame Intra-chr q22.1 q22.2 TK:Ryk 23317 ChimerSeq STARFusion TCGA_RNA-Seq GATA3-TAF3 GATA3 chr10 8111561 + TAF3 chr10 8055694 + Exonic hg19 BRCA TCGA-AR-A1AP-01A 138 499 In-Frame Intra-chr p14 Oncogene Transcription factor p14 Seq+ 23318 ChimerSeq STARFusion TCGA_RNA-Seq CLNS1A-TRIM49C CLNS1A chr11 77348635 - TRIM49C chr11 89765565 + Exonic hg19 BRCA TCGA-AR-A1AP-01A 21 48 Out-of-frame Intra-chr q14.1 q14.3 Seq+ 23319 ChimerSeq STARFusion TCGA_RNA-Seq TTLL5-TSHR TTLL5 chr14 76286504 + TSHR chr14 81528492 + Exonic hg19 BRCA TCGA-AR-A1AP-01A 4 25 In-Frame Intra-chr q24.3 q31.1 Oncogene Seq+ 23320 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38092208 + MIPOL1 chr14 38016110 + Exonic hg19 BRCA TCGA-AR-A1AP-01A 3 25 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 23321 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38075947 + MIPOL1 chr14 38016110 + Exonic hg19 BRCA TCGA-AR-A1AP-01A 2 25 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 23322 ChimerSeq STARFusion TCGA_RNA-Seq ATXN2-CCDC59 ATXN2 chr12 111990084 - CCDC59 chr12 82702094 - Exonic hg19 BRCA TCGA-AR-A1AP-01A 2 4 CDS-3'UTR Intra-chr q24.12 q21.31 Seq+ 23323 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7B-PRPF31 ZC3H7B chr22 41697776 + PRPF31 chr19 54619064 + Exonic hg19 BRCA TCGA-AN-A041-01A 25 12 5'UTR-5'UTR Inter-chr q13.2 Seq+ 23324 ChimerSeq STARFusion TCGA_RNA-Seq TULP3-RHNO1 TULP3 chr12 3031568 + RHNO1 chr12 2985553 + Exonic hg19 BRCA TCGA-AN-A041-01A 11 40 Out-of-frame Intra-chr p13.33 p13.33 23325 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PSME3 RARA chr17 38512898 + PSME3 chr17 40989666 + Exonic hg19 BRCA TCGA-AN-A041-01A 8 34 3'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q21.31 Seq+ 23326 ChimerSeq STARFusion TCGA_RNA-Seq RNF139-ASPH RNF139 chr8 125487531 + ASPH chr8 62566219 - Exonic hg19 BRCA TCGA-AN-A041-01A 4 10 In-Frame Intra-chr q24.13 q12.3 Seq+ 23327 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SERPINA3 IGH@ chr14 106757648 - SERPINA3 chr14 95080934 + Exonic hg19 BRCA TCGA-A8-A08I-01A 124 13 Out-of-frame Intra-chr 32.33 q32.13 23328 ChimerSeq STARFusion TCGA_RNA-Seq KATNA1-PPP2R1A KATNA1 chr6 149922730 - PPP2R1A chr19 52719782 + Exonic hg19 BRCA TCGA-A8-A08I-01A 44 103 In-Frame Inter-chr q25.1 q13.41 Oncogene Seq+ 23329 ChimerSeq STARFusion TCGA_RNA-Seq ZNF675-IGSF23 ZNF675 chr19 23869834 - IGSF23 chr19 45121425 + Exonic hg19 BRCA TCGA-A8-A08I-01A 31 113 Out-of-frame Intra-chr p12 Transcription factor q13.31 Seq+ 23330 ChimerSeq STARFusion TCGA_RNA-Seq KATNA1-PPP2R1A KATNA1 chr6 149924404 - PPP2R1A chr19 52719782 + Exonic hg19 BRCA TCGA-A8-A08I-01A 10 103 In-Frame Inter-chr q25.1 q13.41 Oncogene Seq+ 23331 ChimerSeq STARFusion TCGA_RNA-Seq C1orf112-RPL5 C1orf112 chr1 169768099 + RPL5 chr1 93303013 + Exonic hg19 BRCA TCGA-A8-A08I-01A 19 66 5'UTR-CDS Intra-chr q24.2 p22.1 Tumor suppressor gene Seq+ 23332 ChimerSeq STARFusion TCGA_RNA-Seq ZNF675-IGSF23 ZNF675 chr19 23869833 - IGSF23 chr19 45127000 + Exonic hg19 BRCA TCGA-A8-A08I-01A 7 98 Out-of-frame Intra-chr p12 Transcription factor q13.31 Seq+ 23333 ChimerSeq STARFusion TCGA_RNA-Seq AKAP7-ESR1 AKAP7 chr6 131466556 + ESR1 chr6 152415520 + Exonic hg19 BRCA TCGA-A8-A08I-01A 10 72 In-Frame Intra-chr q23.2 q25.1 Oncogene Tumor suppressor gene Transcription factor Seq+ 23334 ChimerSeq STARFusion TCGA_RNA-Seq RNF38-GLIPR2 RNF38 chr9 36400551 - GLIPR2 chr9 36162359 + Exonic hg19 BRCA TCGA-A8-A08I-01A 11 56 5'UTR-CDS Intra-chr p13.2 p13.3 Seq+ 23335 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC7-GLIPR2 ZCCHC7 chr9 37126939 + GLIPR2 chr9 36162359 + Exonic hg19 BRCA TCGA-A8-A08I-01A 12 38 In-Frame Intra-chr p13.2 p13.3 Seq+ 23336 ChimerSeq STARFusion TCGA_RNA-Seq AKAP7-ESR1 AKAP7 chr6 131466556 + ESR1 chr6 152419867 + Exonic hg19 BRCA TCGA-A8-A08I-01A 3 72 Out-of-frame Intra-chr q23.2 q25.1 Oncogene Tumor suppressor gene Transcription factor Seq+ 23337 ChimerSeq STARFusion TCGA_RNA-Seq RNF38-GLIPR2 RNF38 chr9 36400933 - GLIPR2 chr9 36162359 + Exonic hg19 BRCA TCGA-A8-A08I-01A 6 56 5'UTR-CDS Intra-chr p13.2 p13.3 Seq+ 23338 ChimerSeq STARFusion TCGA_RNA-Seq EMC10-MBOAT7 EMC10 chr19 50984234 + MBOAT7 chr19 54692365 - Exonic hg19 BRCA TCGA-A8-A08I-01A 13 24 Out-of-frame Intra-chr q13.33 Seq+ 23339 ChimerSeq STARFusion TCGA_RNA-Seq FAM168A-DNAJB13 FAM168A chr11 73308968 - DNAJB13 chr11 73669362 + Exonic hg19 BRCA TCGA-A8-A08I-01A 12 23 5'UTR-CDS Intra-chr q13.4 q13.4 Seq+ 23340 ChimerSeq STARFusion TCGA_RNA-Seq MTF2-GPSM2 MTF2 chr1 93545088 + GPSM2 chr1 109427897 + Exonic hg19 BRCA TCGA-A8-A08I-01A 5 40 5'UTR-5'UTR Intra-chr p22.1 Transcription factor p13.3 Seq+ 23341 ChimerSeq STARFusion TCGA_RNA-Seq MTF2-GPSM2 MTF2 chr1 93545088 + GPSM2 chr1 109417955 + Exonic hg19 BRCA TCGA-A8-A08I-01A 4 40 5'UTR-5'UTR Intra-chr p22.1 Transcription factor p13.3 Seq+ 23342 ChimerSeq STARFusion TCGA_RNA-Seq BRF1-FOXN3 BRF1 chr14 105713408 - FOXN3 chr14 89878834 - Exonic hg19 BRCA TCGA-A8-A08I-01A 7 21 5'UTR-5'UTR Intra-chr q32.33 Tumor suppressor gene q32.11 Transcription factor Seq+ 23343 ChimerSeq STARFusion TCGA_RNA-Seq SEMA6A-LSM6 SEMA6A chr5 115822445 - LSM6 chr4 147104064 + Exonic hg19 BRCA TCGA-A8-A08I-01A 7 15 CDS-5'UTR Inter-chr q23.1 q31.22 Seq+ 23344 ChimerSeq STARFusion TCGA_RNA-Seq XPR1-TYW3 XPR1 chr1 180651547 + TYW3 chr1 75202226 + Exonic hg19 BRCA TCGA-A8-A08I-01A 5 20 Out-of-frame Intra-chr q25.3 p31.1 Seq+ 23345 ChimerSeq STARFusion TCGA_RNA-Seq EFCAB11-ASB2 EFCAB11 chr14 90397885 - ASB2 chr14 94420829 - Exonic hg19 BRCA TCGA-A8-A08I-01A 5 12 In-Frame Intra-chr q32.11 Seq+ 23346 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A51-GLIPR2 SLC25A51 chr9 37903528 - GLIPR2 chr9 36162359 + Exonic hg19 BRCA TCGA-A8-A08I-01A 3 14 3'UTR-CDS Intra-chr p13.1 p13.3 Seq+ 23347 ChimerSeq STARFusion TCGA_RNA-Seq TRMT10B-AR TRMT10B chr9 37776402 + AR chrX 66905852 + Exonic hg19 BRCA TCGA-A8-A08I-01A 3 13 Out-of-frame Inter-chr p13.2 q12 Oncogene Tumor suppressor gene Transcription factor Seq+ 23348 ChimerSeq STARFusion TCGA_RNA-Seq BLNK-ZNF536 BLNK chr10 98002491 - ZNF536 chr19 31025754 + Exonic hg19 BRCA TCGA-A8-A08I-01A 2 15 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q12 Transcription factor Seq+ 23349 ChimerSeq STARFusion TCGA_RNA-Seq UHRF1-ACTA2 UHRF1 chr19 4911050 + ACTA2 chr10 90707143 - Exonic hg19 BRCA TCGA-E2-A106-01A 24 107 In-Frame Inter-chr p13.3 q23.31 Seq+ 23350 ChimerSeq STARFusion TCGA_RNA-Seq SHANK2-ELP4 SHANK2 chr11 70505933 - ELP4 chr11 31804941 + Exonic hg19 BRCA TCGA-E2-A106-01A 17 81 In-Frame Intra-chr q13.4 p13 Seq+ 23351 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD2-CHD6 PCMTD2 chr20 62899363 + CHD6 chr20 40179999 - Exonic hg19 BRCA TCGA-E2-A106-01A 7 36 CDS-5'UTR Intra-chr q12 Seq+ 23352 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KA1-RASGRP3 RPS6KA1 chr1 26863460 + RASGRP3 chr2 33759390 + Exonic hg19 BRCA TCGA-E2-A106-01A 7 33 In-Frame Inter-chr p22.3 Seq+ 23353 ChimerSeq STARFusion TCGA_RNA-Seq TMEM254-CREB3L3 TMEM254 chr10 81841960 + CREB3L3 chr19 4170137 + Exonic hg19 BRCA TCGA-E2-A106-01A 9 10 Out-of-frame Inter-chr q22.3 p13.3 Transcription factor Seq+ 23354 ChimerSeq STARFusion TCGA_RNA-Seq CHD6-TSHZ2 CHD6 chr20 40074305 - TSHZ2 chr20 52060790 + Exonic hg19 BRCA TCGA-E2-A106-01A 5 13 CDS-3'UTR Intra-chr q12 q13.2 Transcription factor Seq+ 23355 ChimerSeq STARFusion TCGA_RNA-Seq CHD6-TSHZ2 CHD6 chr20 40074305 - TSHZ2 chr20 52103683 + Exonic hg19 BRCA TCGA-E2-A106-01A 2 13 CDS-3'UTR Intra-chr q12 q13.2 Transcription factor Seq+ 23356 ChimerSeq STARFusion TCGA_RNA-Seq KCNMA1-RFX2 KCNMA1 chr10 79397023 - RFX2 chr19 6047515 - Exonic hg19 BRCA TCGA-E2-A106-01A 3 5 CDS-5'UTR Inter-chr q22.3 p13.3 Transcription factor Seq+ 23357 ChimerSeq STARFusion TCGA_RNA-Seq SLC30A8-EIF3H SLC30A8 chr8 117963358 + EIF3H chr8 117671219 - Exonic hg19 BRCA TCGA-E2-A106-01A 2 0 5'UTR-CDS Intra-chr q24.11 q24.11 23358 ChimerSeq STARFusion TCGA_RNA-Seq ZNF253-LINC00466 ZNF253 chr19 19976808 + LINC00466 chr1 63628353 - Exonic hg19 BRCA TCGA-BH-A0HF-01A 3 1 CDS-3'UTR Inter-chr p13.11 Transcription factor p31.3 Seq+ 23359 ChimerSeq STARFusion TCGA_RNA-Seq TNFAIP8-HSD17B4 TNFAIP8 chr5 118604602 + HSD17B4 chr5 118872118 + Exonic hg19 BRCA TCGA-BH-A0HF-01A 2 0 In-Frame Intra-chr q23.1 q23.1 23360 ChimerSeq STARFusion TCGA_RNA-Seq LOC643714-TOX3 LOC643714 chr16 52624848 - TOX3 chr16 52502486 - Exonic hg19 BRCA TCGA-E2-A10B-01A 6 21 3'UTR-CDS Intra-chr q12.1 23361 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-CETN3 SKIV2L2 chr5 54662703 + CETN3 chr5 89689924 - Exonic hg19 BRCA TCGA-C8-A27A-01A 19 101 In-Frame Intra-chr q11.2 q14.3 Seq+ 23362 ChimerSeq STARFusion TCGA_RNA-Seq ASAP1-CLVS1 ASAP1 chr8 131370263 - CLVS1 chr8 62366700 + Exonic hg19 BRCA TCGA-C8-A27A-01A 12 64 In-Frame Intra-chr q24.22 q12.2 Seq+ 23363 ChimerSeq STARFusion TCGA_RNA-Seq ASAP1-CLVS1 ASAP1 chr8 131414131 - CLVS1 chr8 62366700 + Exonic hg19 BRCA TCGA-C8-A27A-01A 4 63 Out-of-frame Intra-chr q24.22 q12.2 Seq+ 23364 ChimerSeq STARFusion TCGA_RNA-Seq ADAM9-LINC00977 ADAM9 chr8 38948865 + LINC00977 chr8 130235615 - Exonic hg19 BRCA TCGA-C8-A27A-01A 6 35 Out-of-frame Intra-chr q24.21 23365 ChimerSeq STARFusion TCGA_RNA-Seq NSMAF-LETM2 NSMAF chr8 59509946 - LETM2 chr8 38257790 + Exonic hg19 BRCA TCGA-C8-A27A-01A 5 26 Out-of-frame Intra-chr q12.1 p11.23 Seq+ 23366 ChimerSeq STARFusion TCGA_RNA-Seq CDK5RAP3-RNF43 CDK5RAP3 chr17 46051814 + RNF43 chr17 56448394 - Exonic hg19 BRCA TCGA-C8-A27A-01A 3 21 Out-of-frame Intra-chr q21.32 q22 Oncogene Seq+ 23367 ChimerSeq STARFusion TCGA_RNA-Seq CHD7-TACC1 CHD7 chr8 61693989 + TACC1 chr8 38599869 + Exonic hg19 BRCA TCGA-C8-A27A-01A 5 12 CDS-5'UTR Intra-chr q12.2 p11.22 Seq+ 23368 ChimerSeq STARFusion TCGA_RNA-Seq CASC11-PVT1 CASC11 chr8 128715295 - PVT1 chr8 128867401 + Exonic hg19 BRCA TCGA-C8-A27A-01A 3 17 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 23369 ChimerSeq STARFusion TCGA_RNA-Seq RNF43-NFE2L1 RNF43 chr17 56439905 - NFE2L1 chr17 46128479 + Exonic hg19 BRCA TCGA-C8-A27A-01A 3 9 CDS-5'UTR Intra-chr q22 Oncogene q21.32 Transcription factor Seq+ 23370 ChimerSeq STARFusion TCGA_RNA-Seq EHMT1-ARRDC1 EHMT1 chr9 140513501 + ARRDC1 chr9 140507348 + Exonic hg19 BRCA TCGA-PL-A8LZ-01A 34 7 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 23371 ChimerSeq STARFusion TCGA_RNA-Seq USP10-KIFC3 USP10 chr16 84767109 + KIFC3 chr16 57800897 - Exonic hg19 BRCA TCGA-PL-A8LZ-01A 16 59 In-Frame Intra-chr q24.1 q21 Seq+ 23372 ChimerSeq STARFusion TCGA_RNA-Seq TMEM48-YIPF1 TMEM48 chr1 54291471 - YIPF1 chr1 54325826 - Exonic hg19 BRCA TCGA-PL-A8LZ-01A 6 49 In-Frame Intra-chr p32.3 Seq+ 23373 ChimerSeq STARFusion TCGA_RNA-Seq SPECC1L-ADORA2A SPECC1L chr22 24666951 + ADORA2A chr22 24829099 + Exonic hg19 BRCA TCGA-PL-A8LZ-01A 3 25 5'UTR-5'UTR Intra-chr q11.23 q11.23 23374 ChimerSeq STARFusion TCGA_RNA-Seq SPECC1L-ADORA2A SPECC1L chr22 24666951 + ADORA2A chr22 24836551 + Exonic hg19 BRCA TCGA-PL-A8LZ-01A 2 25 5'UTR-CDS Intra-chr q11.23 q11.23 23375 ChimerSeq STARFusion TCGA_RNA-Seq PIK3C2A-PLEKHA7 PIK3C2A chr11 17126716 - PLEKHA7 chr11 16892729 - Exonic hg19 BRCA TCGA-PL-A8LZ-01A 3 5 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 23376 ChimerSeq STARFusion TCGA_RNA-Seq CENPO-NCOA1 CENPO chr2 25040710 + NCOA1 chr2 24985556 + Exonic hg19 BRCA TCGA-PL-A8LZ-01A 2 7 3'UTR-CDS Intra-chr p23.3 p23.3 Oncogene Transcription factor Seq+ 23377 ChimerSeq STARFusion TCGA_RNA-Seq QPRT-TEX36 QPRT chr16 29690531 + TEX36 chr10 127350546 - Exonic hg19 BRCA TCGA-PL-A8LZ-01A 3 1 Out-of-frame Inter-chr p11.2 q26.13 23378 ChimerSeq STARFusion TCGA_RNA-Seq HECTD2-PCGF5 HECTD2 chr10 93185167 + PCGF5 chr10 93021083 + Exonic hg19 BRCA TCGA-C8-A1HG-01A 7 11 Out-of-frame Intra-chr q23.32 q23.32 Seq+ 23379 ChimerSeq STARFusion TCGA_RNA-Seq YWHAG-NAF1 YWHAG chr7 75988039 - NAF1 chr4 164069586 - Exonic hg19 BRCA TCGA-C8-A1HG-01A 2 0 In-Frame Inter-chr q11.23 q32.2 23380 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-CCL4L2 SLC39A11 chr17 70943891 - CCL4L2 chr17 34640744 + Exonic hg19 BRCA TCGA-BH-A0DD-01A 25 130 In-Frame Intra-chr q25.1 q12 23381 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-CCL4L2 SLC39A11 chr17 70943891 - CCL4L2 chr17 34641450 + Exonic hg19 BRCA TCGA-BH-A0DD-01A 8 130 Out-of-frame Intra-chr q25.1 q12 23382 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-SLC39A11 PPFIA1 chr11 70172924 + SLC39A11 chr17 71027853 - Exonic hg19 BRCA TCGA-BH-A0DD-01A 15 83 In-Frame Inter-chr q13.3 q25.1 Seq+ 23383 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-CCL4L2 SLC39A11 chr17 70943873 - CCL4L2 chr17 34641447 + Exonic hg19 BRCA TCGA-BH-A0DD-01A 3 130 Out-of-frame Intra-chr q25.1 q12 23384 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-SLC39A11 PPFIA1 chr11 70172924 + SLC39A11 chr17 71084914 - Exonic hg19 BRCA TCGA-BH-A0DD-01A 13 80 5'UTR-5'UTR Inter-chr q13.3 q25.1 Seq+ 23385 ChimerSeq STARFusion TCGA_RNA-Seq PPM1H-C12orf56 PPM1H chr12 63060958 - C12orf56 chr12 64671583 - Exonic hg19 BRCA TCGA-BH-A0DD-01A 6 71 In-Frame Intra-chr q14.2 q14.2 Seq+ 23386 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-SLC39A11 PPFIA1 chr11 70172924 + SLC39A11 chr17 71080985 - Exonic hg19 BRCA TCGA-BH-A0DD-01A 3 80 In-Frame Inter-chr q13.3 q25.1 Seq+ 23387 ChimerSeq STARFusion TCGA_RNA-Seq DENND1B-CCSER1 DENND1B chr1 197741998 - CCSER1 chr4 91736913 + Exonic hg19 BRCA TCGA-BH-A0DD-01A 9 55 Out-of-frame Inter-chr q31.3 q22.1 Seq+ 23388 ChimerSeq STARFusion TCGA_RNA-Seq PPM1H-C12orf56 PPM1H chr12 63060958 - C12orf56 chr12 64669152 - Exonic hg19 BRCA TCGA-BH-A0DD-01A 3 70 Out-of-frame Intra-chr q14.2 q14.2 Seq+ 23389 ChimerSeq STARFusion TCGA_RNA-Seq PPM1H-C12orf56 PPM1H chr12 63060958 - C12orf56 chr12 64668755 - Exonic hg19 BRCA TCGA-BH-A0DD-01A 2 70 Out-of-frame Intra-chr q14.2 q14.2 Seq+ 23390 ChimerSeq STARFusion TCGA_RNA-Seq MED24-LINC00469 MED24 chr17 38188902 - LINC00469 chr17 71757165 - Exonic hg19 BRCA TCGA-BH-A0DD-01A 8 38 CDS-3'UTR Intra-chr q21.1 q25.1 Seq+ 23391 ChimerSeq STARFusion TCGA_RNA-Seq USP22-MYO19 USP22 chr17 20945978 - MYO19 chr17 34852250 - Exonic hg19 BRCA TCGA-BH-A0DD-01A 8 34 In-Frame Intra-chr p11.2 q12 Seq+ 23392 ChimerSeq STARFusion TCGA_RNA-Seq MED24-LINC00469 MED24 chr17 38189309 - LINC00469 chr17 71757165 - Exonic hg19 BRCA TCGA-BH-A0DD-01A 5 38 CDS-3'UTR Intra-chr q21.1 q25.1 Seq+ 23393 ChimerSeq STARFusion TCGA_RNA-Seq MYO18A-SERGEF MYO18A chr17 27492960 - SERGEF chr11 17899791 - Exonic hg19 BRCA TCGA-BH-A0DD-01A 6 8 In-Frame Inter-chr q11.2 Oncogene p15.1 Seq+ 23394 ChimerSeq STARFusion TCGA_RNA-Seq MED24-ACAA1 MED24 chr17 38188898 - ACAA1 chr3 38166063 - Exonic hg19 BRCA TCGA-BH-A0DD-01A 7 0 Out-of-frame Inter-chr q21.1 p22.2 23395 ChimerSeq STARFusion TCGA_RNA-Seq ACACA-FAM104A ACACA chr17 35631084 - FAM104A chr17 71205907 - Exonic hg19 BRCA TCGA-BH-A0DD-01A 2 16 In-Frame Intra-chr q25.1 Seq+ 23396 ChimerSeq STARFusion TCGA_RNA-Seq RARA-TBC1D3B RARA chr17 38474700 + TBC1D3B chr17 34502411 - Exonic hg19 BRCA TCGA-BH-A0DD-01A 2 15 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor Seq+ 23397 ChimerSeq STARFusion TCGA_RNA-Seq HIPK3-TOLLIP HIPK3 chr11 33279435 + TOLLIP chr11 1317024 - Exonic hg19 BRCA TCGA-BH-A0DD-01A 2 10 5'UTR-CDS Intra-chr p13 CMGC:DYRK p15.5 Seq+ 23398 ChimerSeq STARFusion TCGA_RNA-Seq PXDNL-MSI2 PXDNL chr8 52721741 - MSI2 chr17 55729460 + Exonic hg19 BRCA TCGA-BH-A0DD-01A 2 7 Out-of-frame Inter-chr q11.23 q22 Seq+ 23399 ChimerSeq STARFusion TCGA_RNA-Seq RARA-SKAP1 RARA chr17 38487648 + SKAP1 chr17 46214699 - Exonic hg19 BRCA TCGA-B6-A0IN-01A 61 365 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q21.32 Seq+ 23400 ChimerSeq STARFusion TCGA_RNA-Seq RARA-SKAP1 RARA chr17 38487648 + SKAP1 chr17 46211178 - Exonic hg19 BRCA TCGA-B6-A0IN-01A 13 361 CDS-3'UTR Intra-chr q21.2 Oncogene Transcription factor q21.32 Seq+ 23401 ChimerSeq STARFusion TCGA_RNA-Seq RARA-SKAP1 RARA chr17 38499119 + SKAP1 chr17 46214699 - Exonic hg19 BRCA TCGA-B6-A0IN-01A 11 361 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q21.32 Seq+ 23402 ChimerSeq STARFusion TCGA_RNA-Seq APPBP2-DCAF7 APPBP2 chr17 58603155 - DCAF7 chr17 61655831 + Exonic hg19 BRCA TCGA-B6-A0IN-01A 5 14 In-Frame Intra-chr q23.2 q23.3 Seq+ 23403 ChimerSeq STARFusion TCGA_RNA-Seq CUL1-GIMAP5 CUL1 chr7 148484212 + GIMAP5 chr7 150437967 + Exonic hg19 BRCA TCGA-B6-A0IN-01A 3 11 CDS-5'UTR Intra-chr q36.1 Tumor suppressor gene q36.1 Seq+ 23404 ChimerSeq STARFusion TCGA_RNA-Seq PITPNB-SBF1 PITPNB chr22 28306952 - SBF1 chr22 50885882 - Exonic hg19 BRCA TCGA-B6-A0IN-01A 2 10 Out-of-frame Intra-chr q12.1 q13.33 Seq+ 23405 ChimerSeq STARFusion TCGA_RNA-Seq WAC-APBB1IP WAC chr10 28824686 + APBB1IP chr10 26849034 + Exonic hg19 BRCA TCGA-AO-A0JI-01A 57 156 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 23406 ChimerSeq STARFusion TCGA_RNA-Seq ERBB4-TBC1D19 ERBB4 chr2 213403173 - TBC1D19 chr4 26721703 + Exonic hg19 BRCA TCGA-AO-A0JI-01A 2 0 In-Frame Inter-chr q34 Oncogene Tumor suppressor gene p15.2 23407 ChimerSeq STARFusion TCGA_RNA-Seq NAP1L1-STK38L NAP1L1 chr12 76478347 - STK38L chr12 27450643 + Exonic hg19 BRCA TCGA-BH-A1FN-01A 15 25 5'UTR-5'UTR Intra-chr q21.2 p11.23 Seq+ 23408 ChimerSeq STARFusion TCGA_RNA-Seq DLG5-ANAPC16 DLG5 chr10 79685975 - ANAPC16 chr10 73990124 + Exonic hg19 BRCA TCGA-BH-A1FN-01A 3 12 In-Frame Intra-chr q22.3 q22.1 Seq+ 23409 ChimerSeq STARFusion TCGA_RNA-Seq USP42-SLC46A2 USP42 chr7 6155154 + SLC46A2 chr9 115649693 - Exonic hg19 BRCA TCGA-BH-A1FN-01A 2 9 In-Frame Inter-chr p22.1 q32 Seq+ 23410 ChimerSeq STARFusion TCGA_RNA-Seq P4HA1-ANK3 P4HA1 chr10 74831787 - ANK3 chr10 62039397 - Exonic hg19 BRCA TCGA-BH-A1FN-01A 2 5 Out-of-frame Intra-chr q22.1 q21.2 Seq+ 23411 ChimerSeq STARFusion TCGA_RNA-Seq HOOK1-RAB6A HOOK1 chr1 60280852 + RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-AR-A24Z-01A 26 39 In-Frame Inter-chr p32.1 q13.4 Seq+ 23412 ChimerSeq STARFusion TCGA_RNA-Seq SORBS2-AIF1 SORBS2 chr4 186605908 - AIF1 chr6 31584121 + Exonic hg19 BRCA TCGA-AR-A24Z-01A 18 31 In-Frame Inter-chr q35.1 Tumor suppressor gene Seq+ 23413 ChimerSeq STARFusion TCGA_RNA-Seq GABPB2-OR10J1 GABPB2 chr1 151070478 + OR10J1 chr1 159409566 + Exonic hg19 BRCA TCGA-AR-A24Z-01A 16 38 Out-of-frame Intra-chr q21.3 q23.2 Seq+ 23414 ChimerSeq STARFusion TCGA_RNA-Seq LAMC1-SUSD4 LAMC1 chr1 183105585 + SUSD4 chr1 223454425 - Exonic hg19 BRCA TCGA-AR-A24Z-01A 14 19 Out-of-frame Intra-chr q25.3 q41 Seq+ 23415 ChimerSeq STARFusion TCGA_RNA-Seq PACSIN2-ZNF823 PACSIN2 chr22 43308027 - ZNF823 chr19 11836142 - Exonic hg19 BRCA TCGA-AR-A24Z-01A 9 24 In-Frame Inter-chr q13.2 p13.2 Transcription factor Seq+ 23416 ChimerSeq STARFusion TCGA_RNA-Seq RPL7L1-FOXP4 RPL7L1 chr6 42854392 + FOXP4 chr6 41567405 + Exonic hg19 BRCA TCGA-AR-A24Z-01A 6 35 Out-of-frame Intra-chr p21.1 p21.1 Oncogene Transcription factor 23417 ChimerSeq STARFusion TCGA_RNA-Seq DOCK7-INADL DOCK7 chr1 62958375 - INADL chr1 62626580 + Exonic hg19 BRCA TCGA-AR-A24Z-01A 6 19 Out-of-frame Intra-chr p31.3 Seq+ 23418 ChimerSeq STARFusion TCGA_RNA-Seq PCNXL2-PTPN14 PCNXL2 chr1 233270761 - PTPN14 chr1 214638302 - Exonic hg19 BRCA TCGA-AR-A24Z-01A 3 28 Out-of-frame Intra-chr q41 Seq+ 23419 ChimerSeq STARFusion TCGA_RNA-Seq DSTYK-NAV1 DSTYK chr1 205180399 - NAV1 chr1 201749549 + Exonic hg19 BRCA TCGA-AR-A24Z-01A 2 29 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 23420 ChimerSeq STARFusion TCGA_RNA-Seq PCNXL2-PTPN14 PCNXL2 chr1 233270759 - PTPN14 chr1 214638300 - Exonic hg19 BRCA TCGA-AR-A24Z-01A 2 28 CDS-5'UTR Intra-chr q41 Seq+ 23421 ChimerSeq STARFusion TCGA_RNA-Seq UPF3A-TENM2 UPF3A chr13 115048418 + TENM2 chr5 166711769 + Exonic hg19 BRCA TCGA-AR-A24Z-01A 3 13 Out-of-frame Inter-chr q34 q34 23422 ChimerSeq STARFusion TCGA_RNA-Seq CDK19-ZFAND3 CDK19 chr6 111136212 - ZFAND3 chr6 38120011 + Exonic hg19 BRCA TCGA-AR-A24Z-01A 2 16 Out-of-frame Intra-chr q21 p21.2 Seq+ 23423 ChimerSeq STARFusion TCGA_RNA-Seq RARS2-SMAP1 RARS2 chr6 88299640 - SMAP1 chr6 71508360 + Exonic hg19 BRCA TCGA-AR-A24Z-01A 3 9 In-Frame Intra-chr q15 q13 Seq+ 23424 ChimerSeq STARFusion TCGA_RNA-Seq FOXJ3-ZFYVE9 FOXJ3 chr1 42730786 - ZFYVE9 chr1 52682041 + Exonic hg19 BRCA TCGA-AR-A24Z-01A 2 12 CDS-5'UTR Intra-chr p34.2 Transcription factor p32.3 Seq+ 23425 ChimerSeq STARFusion TCGA_RNA-Seq DOCK7-PPP1R12B DOCK7 chr1 62958375 - PPP1R12B chr1 202457661 + Exonic hg19 BRCA TCGA-AR-A24Z-01A 2 10 Out-of-frame Intra-chr p31.3 q32.1 Seq+ 23426 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF9-CISD2 ARHGEF9 chrX 62974195 - CISD2 chr4 103806373 + Exonic hg19 BRCA TCGA-A2-A0EM-01A 3 4 5'UTR-CDS Inter-chr q11.2 q24 Seq+ 23427 ChimerSeq STARFusion TCGA_RNA-Seq LHFPL2-KCNIP1 LHFPL2 chr5 77860636 - KCNIP1 chr5 170145762 + Exonic hg19 BRCA TCGA-BH-A0B3-01A 35 123 5'UTR-CDS Intra-chr q14.1 q35.1 Seq+ 23428 ChimerSeq STARFusion TCGA_RNA-Seq HSF1-ADAMTS12 HSF1 chr8 145515556 + ADAMTS12 chr5 33596165 - Exonic hg19 BRCA TCGA-BH-A0B3-01A 20 37 Out-of-frame Inter-chr q24.3 Transcription factor p13.2 Seq+ 23429 ChimerSeq STARFusion TCGA_RNA-Seq LANCL3-LOC100507412 LANCL3 chrX 37431696 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 BRCA TCGA-BH-A0B3-01A 4 12 CDS-5'UTR Inter-chr p21.1 23430 ChimerSeq STARFusion TCGA_RNA-Seq NOL11-CARD11 NOL11 chr17 65733261 + CARD11 chr7 2979562 - Exonic hg19 BRCA TCGA-BH-A0B3-01A 4 11 In-Frame Inter-chr q24.2 p22.2 Oncogene Seq+ 23431 ChimerSeq STARFusion TCGA_RNA-Seq RASA1-VDAC1 RASA1 chr5 86665717 + VDAC1 chr5 133328709 - Exonic hg19 BRCA TCGA-BH-A0B3-01A 3 14 CDS-5'UTR Intra-chr q14.3 q31.1 Seq+ 23432 ChimerSeq STARFusion TCGA_RNA-Seq PDGFA-NT5C3A PDGFA chr7 550446 - NT5C3A chr7 33063720 - Exonic hg19 BRCA TCGA-A2-A0YE-01A 86 294 Out-of-frame Intra-chr p22.3 p14.3 Seq+ 23433 ChimerSeq STARFusion TCGA_RNA-Seq PDGFA-NT5C3A PDGFA chr7 550157 - NT5C3A chr7 33063720 - Exonic hg19 BRCA TCGA-A2-A0YE-01A 10 260 Out-of-frame Intra-chr p22.3 p14.3 Seq+ 23434 ChimerSeq STARFusion TCGA_RNA-Seq HS2ST1-PRDX1 HS2ST1 chr1 87380843 + PRDX1 chr1 45984726 - Exonic hg19 BRCA TCGA-A2-A0YE-01A 22 75 CDS-5'UTR Intra-chr p22.3 p34.1 Seq+ 23435 ChimerSeq STARFusion TCGA_RNA-Seq CDC42EP4-SDK2 CDC42EP4 chr17 71308032 - SDK2 chr17 71361534 - Exonic hg19 BRCA TCGA-A2-A0YE-01A 20 74 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 23436 ChimerSeq STARFusion TCGA_RNA-Seq CDC42EP4-SDK2 CDC42EP4 chr17 71308032 - SDK2 chr17 71357984 - Exonic hg19 BRCA TCGA-A2-A0YE-01A 8 73 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 23437 ChimerSeq STARFusion TCGA_RNA-Seq CDC42EP4-SDK2 CDC42EP4 chr17 71307020 - SDK2 chr17 71361534 - Exonic hg19 BRCA TCGA-A2-A0YE-01A 6 73 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 23438 ChimerSeq STARFusion TCGA_RNA-Seq SDF2-RPTOR SDF2 chr17 26988744 - RPTOR chr17 78599491 + Exonic hg19 BRCA TCGA-A2-A0YE-01A 7 35 Out-of-frame Intra-chr q11.2 q25.3 Seq+ 23439 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-PITPNC1 SLC39A11 chr17 70845773 - PITPNC1 chr17 65528918 + Exonic hg19 BRCA TCGA-A2-A0YE-01A 3 20 Out-of-frame Intra-chr q25.1 q24.2 Seq+ 23440 ChimerSeq STARFusion TCGA_RNA-Seq KLHL26-KXD1 KLHL26 chr19 18775253 + KXD1 chr19 18679212 + Exonic hg19 BRCA TCGA-A2-A0YE-01A 4 13 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 23441 ChimerSeq STARFusion TCGA_RNA-Seq CREB5-USP42 CREB5 chr7 28547355 + USP42 chr7 6196385 + Exonic hg19 BRCA TCGA-A2-A0YE-01A 2 13 Out-of-frame Intra-chr p15.1 Transcription factor p22.1 Seq+ 23442 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2-MACF1 NOTCH2 chr1 120572529 - MACF1 chr1 39775242 + Exonic hg19 BRCA TCGA-A2-A0YE-01A 3 9 In-Frame Intra-chr p12 Oncogene Tumor suppressor gene p34.3 23443 ChimerSeq STARFusion TCGA_RNA-Seq PRKCA-ST6GALNAC2 PRKCA chr17 64492401 + ST6GALNAC2 chr17 74574898 - Exonic hg19 BRCA TCGA-A2-A0YE-01A 2 12 Out-of-frame Intra-chr q24.2 q25.1 Seq+ 23444 ChimerSeq STARFusion TCGA_RNA-Seq MTOR-CDC42 MTOR chr1 11259315 - CDC42 chr1 22404922 + Exonic hg19 BRCA TCGA-A2-A0YE-01A 2 8 CDS-5'UTR Intra-chr p36.22 Oncogene p36.12 Seq+ 23445 ChimerSeq STARFusion TCGA_RNA-Seq ADRBK2-SF3A1 ADRBK2 chr22 26040632 + SF3A1 chr22 30749061 - Exonic hg19 BRCA TCGA-A2-A0T3-01A 4 32 In-Frame Intra-chr q12.2 Seq+ 23446 ChimerSeq STARFusion TCGA_RNA-Seq NPTN-CLUAP1 NPTN chr15 73879865 - CLUAP1 chr16 3580568 + Exonic hg19 BRCA TCGA-BH-A0AV-01A 249 553 In-Frame Inter-chr q24.1 p13.3 Seq+ 23447 ChimerSeq STARFusion TCGA_RNA-Seq NSA2-HEXB NSA2 chr5 74066635 + HEXB chr5 74009331 + Exonic hg19 BRCA TCGA-BH-A0AV-01A 14 127 In-Frame Intra-chr q13.3 q13.3 Seq+ 23448 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2B-SET PRRC2B chr9 134354780 + SET chr9 131446059 + Exonic hg19 BRCA TCGA-BH-A0AV-01A 5 22 CDS-5'UTR Intra-chr q34.13 q34.11 Seq+ 23449 ChimerSeq STARFusion TCGA_RNA-Seq DGUOK-ACTG2 DGUOK chr2 74154179 + ACTG2 chr2 74140612 + Exonic hg19 BRCA TCGA-BH-A0AV-01A 3 8 In-Frame Intra-chr p13.1 p13.1 Seq+ 23450 ChimerSeq STARFusion TCGA_RNA-Seq FLJ39739-PDE4DIP FLJ39739 chr1 147931724 - PDE4DIP chr1 144994701 - Exonic hg19 BRCA TCGA-BH-A0AV-01A 3 2 3'UTR-CDS Intra-chr q21.2 Oncogene 23451 ChimerSeq STARFusion TCGA_RNA-Seq SPPL3-CD99L2 SPPL3 chr12 121341648 - CD99L2 chrX 149999766 - Exonic hg19 BRCA TCGA-BH-A0AV-01A 3 2 Out-of-frame Inter-chr q24.31 q28 Seq+ 23452 ChimerSeq STARFusion TCGA_RNA-Seq BAI2-SPOCD1 BAI2 chr1 32221600 - SPOCD1 chr1 32259836 - Exonic hg19 BRCA TCGA-BH-A0AV-01A 2 3 Out-of-frame Intra-chr p35.2 Seq+ 23453 ChimerSeq STARFusion TCGA_RNA-Seq ABTB2-KDM2A ABTB2 chr11 34218872 - KDM2A chr11 66947550 + Exonic hg19 BRCA TCGA-BH-A0AV-01A 2 1 Out-of-frame Intra-chr p13 q13.2 Transcription factor 23454 ChimerSeq STARFusion TCGA_RNA-Seq MTG1-PTK2 MTG1 chr10 135213123 + PTK2 chr8 141762415 - Exonic hg19 BRCA TCGA-BH-A0AV-01A 2 1 Out-of-frame Inter-chr q26.3 q24.3 23455 ChimerSeq STARFusion TCGA_RNA-Seq TRAM1-CLVS1 TRAM1 chr8 71512254 - CLVS1 chr8 62289164 + Exonic hg19 BRCA TCGA-C8-A138-01A 6 15 Out-of-frame Intra-chr q13.3 q12.2 Seq+ 23456 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V1H-CHD7 ATP6V1H chr8 54754138 - CHD7 chr8 61693559 + Exonic hg19 BRCA TCGA-C8-A138-01A 4 4 Out-of-frame Intra-chr q11.23 q12.2 Seq+ 23457 ChimerSeq STARFusion TCGA_RNA-Seq RIN1-RHOD RIN1 chr11 66103788 - RHOD chr11 66833367 + Exonic hg19 BRCA TCGA-C8-A138-01A 2 5 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 23458 ChimerSeq STARFusion TCGA_RNA-Seq C17orf62-ABCA7 C17orf62 chr17 80408576 - ABCA7 chr19 1048894 + Exonic hg19 BRCA TCGA-C8-A138-01A 2 1 5'UTR-CDS Inter-chr q25.3 p13.3 Seq+ 23459 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-SCGB2A2 RNA45S5 chrUn_gl000220 116455 + SCGB2A2 chr11 62037646 + Exonic hg19 BRCA TCGA-BH-A0BM-01A 3 8 Out-of-frame Inter-chr q12.3 23460 ChimerSeq STARFusion TCGA_RNA-Seq DGKE-KRT222 DGKE chr17 54912620 + KRT222 chr17 38814002 - Exonic hg19 BRCA TCGA-C8-A275-01A 62 189 In-Frame Intra-chr q22 q21.2 Seq+ 23461 ChimerSeq STARFusion TCGA_RNA-Seq MSI2-PRR15L MSI2 chr17 55704664 + PRR15L chr17 46030629 - Exonic hg19 BRCA TCGA-C8-A275-01A 39 75 CDS-5'UTR Intra-chr q22 q21.32 Seq+ 23462 ChimerSeq STARFusion TCGA_RNA-Seq USP32-SCPEP1 USP32 chr17 58329742 - SCPEP1 chr17 55075735 + Exonic hg19 BRCA TCGA-C8-A275-01A 24 83 Out-of-frame Intra-chr q23.2 q22 Seq+ 23463 ChimerSeq STARFusion TCGA_RNA-Seq TXNRD1-USP30 TXNRD1 chr12 104682818 + USP30 chr12 109505329 + Exonic hg19 BRCA TCGA-C8-A275-01A 21 39 Out-of-frame Intra-chr q23.3 q24.11 Seq+ 23464 ChimerSeq STARFusion TCGA_RNA-Seq SETD4-FTCD SETD4 chr21 37432645 - FTCD chr21 47558837 - Exonic hg19 BRCA TCGA-C8-A275-01A 10 52 5'UTR-CDS Intra-chr q22.12 Seq+ 23465 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-STRADA STARD3 chr17 37793484 + STRADA chr17 61791468 - Exonic hg19 BRCA TCGA-C8-A275-01A 15 16 5'UTR-5'UTR Intra-chr q12 q23.3 Tumor suppressor gene Seq+ 23466 ChimerSeq STARFusion TCGA_RNA-Seq MSI2-EFCAB5 MSI2 chr17 55607085 + EFCAB5 chr17 28378136 + Exonic hg19 BRCA TCGA-C8-A275-01A 3 62 Out-of-frame Intra-chr q22 q11.2 Seq+ 23467 ChimerSeq STARFusion TCGA_RNA-Seq MSI2-EFCAB5 MSI2 chr17 55607085 + EFCAB5 chr17 28418889 + Exonic hg19 BRCA TCGA-C8-A275-01A 2 62 In-Frame Intra-chr q22 q11.2 Seq+ 23468 ChimerSeq STARFusion TCGA_RNA-Seq MSI2-EFCAB5 MSI2 chr17 55607085 + EFCAB5 chr17 28434852 + Exonic hg19 BRCA TCGA-C8-A275-01A 2 62 In-Frame Intra-chr q22 q11.2 Seq+ 23469 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-SSH2 TANC2 chr17 61086987 + SSH2 chr17 28004759 - Exonic hg19 BRCA TCGA-C8-A275-01A 11 17 Out-of-frame Intra-chr q23.2 q11.2 Seq+ 23470 ChimerSeq STARFusion TCGA_RNA-Seq VMP1-CDC42EP4 VMP1 chr17 57889147 + CDC42EP4 chr17 71282751 - Exonic hg19 BRCA TCGA-C8-A275-01A 6 20 CDS-5'UTR Intra-chr q23.1 q25.1 Seq+ 23471 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-EFCAB5 SSH2 chr17 28120912 - EFCAB5 chr17 28320183 + Exonic hg19 BRCA TCGA-C8-A275-01A 4 17 In-Frame Intra-chr q11.2 q11.2 Seq+ 23472 ChimerSeq STARFusion TCGA_RNA-Seq SKAP1-YPEL2 SKAP1 chr17 46423267 - YPEL2 chr17 57465688 + Exonic hg19 BRCA TCGA-C8-A275-01A 6 5 Out-of-frame Intra-chr q21.32 q22 Seq+ 23473 ChimerSeq STARFusion TCGA_RNA-Seq MCM3AP-APP MCM3AP chr21 47662716 - APP chr21 27269985 - Exonic hg19 BRCA TCGA-C8-A275-01A 2 14 Out-of-frame Intra-chr q22.3 q21.3 Seq+ 23474 ChimerSeq STARFusion TCGA_RNA-Seq MYO18A-ERBB2 MYO18A chr17 27492960 - ERBB2 chr17 37879791 + Exonic hg19 BRCA TCGA-C8-A275-01A 2 11 In-Frame Intra-chr q11.2 Oncogene q12 Oncogene Seq+ 23475 ChimerSeq STARFusion TCGA_RNA-Seq TRIM25-DLX3 TRIM25 chr17 54990753 - DLX3 chr17 48072490 - Exonic hg19 BRCA TCGA-C8-A275-01A 3 5 CDS-5'UTR Intra-chr q22 q21.33 Transcription factor Seq+ 23476 ChimerSeq STARFusion TCGA_RNA-Seq MKS1-CCR7 MKS1 chr17 56289739 - CCR7 chr17 38715194 - Exonic hg19 BRCA TCGA-C8-A275-01A 2 5 Out-of-frame Intra-chr q22 q21.2 Seq+ 23477 ChimerSeq STARFusion TCGA_RNA-Seq BRIP1-CUEDC1 BRIP1 chr17 59853762 - CUEDC1 chr17 55963240 - Exonic hg19 BRCA TCGA-C8-A275-01A 2 4 CDS-5'UTR Intra-chr q23.2 Oncogene q22 Seq+ 23478 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-VMP1 SSH2 chr17 28256956 - VMP1 chr17 57915656 + Exonic hg19 BRCA TCGA-C8-A275-01A 2 3 Out-of-frame Intra-chr q11.2 q23.1 23479 ChimerSeq STARFusion TCGA_RNA-Seq PRRG2-ANKLE2 PRRG2 chr19 50084738 + ANKLE2 chr12 133313651 - Exonic hg19 BRCA TCGA-C8-A275-01A 2 0 5'UTR-CDS Inter-chr q13.33 q24.33 23480 ChimerSeq STARFusion TCGA_RNA-Seq TNKS2-LOC100505933 TNKS2 chr10 93614883 + LOC100505933 chr10 111713649 - Exonic hg19 BRCA TCGA-BH-A1EY-01A 58 200 CDS-3'UTR Intra-chr q23.32 23481 ChimerSeq STARFusion TCGA_RNA-Seq UBL3-ZNF211 UBL3 chr13 30423649 - ZNF211 chr19 58152072 + Exonic hg19 BRCA TCGA-BH-A1EY-01A 38 66 Out-of-frame Inter-chr q12.3 q13.43 Transcription factor Seq+ 23482 ChimerSeq STARFusion TCGA_RNA-Seq ADD3-XPNPEP1 ADD3 chr10 111768057 + XPNPEP1 chr10 111652833 - Exonic hg19 BRCA TCGA-BH-A1EY-01A 20 30 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 23483 ChimerSeq STARFusion TCGA_RNA-Seq ADD3-XPNPEP1 ADD3 chr10 111768057 + XPNPEP1 chr10 111653868 - Exonic hg19 BRCA TCGA-BH-A1EY-01A 3 30 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 23484 ChimerSeq STARFusion TCGA_RNA-Seq ZNF552-UBL3 ZNF552 chr19 58324662 - UBL3 chr13 30351400 - Exonic hg19 BRCA TCGA-BH-A1EY-01A 5 12 Out-of-frame Inter-chr q13.43 Transcription factor q12.3 Seq+ 23485 ChimerSeq STARFusion TCGA_RNA-Seq ADK-PI4K2A ADK chr10 75960596 + PI4K2A chr10 99416042 + Exonic hg19 BRCA TCGA-BH-A1EY-01A 3 14 Out-of-frame Intra-chr q22.2 q24.2 Seq+ 23486 ChimerSeq STARFusion TCGA_RNA-Seq HLCS-IL10RB HLCS chr21 38269160 - IL10RB chr21 34660409 + Exonic hg19 BRCA TCGA-BH-A1EY-01A 3 13 Out-of-frame Intra-chr q22.13 q22.11 Seq+ 23487 ChimerSeq STARFusion TCGA_RNA-Seq PTTG1IP-SIM2 PTTG1IP chr21 46293417 - SIM2 chr21 38081468 + Exonic hg19 BRCA TCGA-BH-A1EY-01A 4 9 In-Frame Intra-chr q22.3 q22.13 Transcription factor Seq+ 23488 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-MYO18A FAM222B chr17 27169700 - MYO18A chr17 27401932 - Exonic hg19 BRCA TCGA-B6-A3ZX-01A 7 125 5'UTR-CDS Intra-chr q11.2 q11.2 Oncogene Seq+ 23489 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-TIAF1 FAM222B chr17 27169700 - TIAF1 chr17 27401932 - Exonic hg19 BRCA TCGA-B6-A3ZX-01A 7 125 5'UTR-5'UTR Intra-chr q11.2 q11.2 Oncogene Seq+ 23490 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-MYO18A FAM222B chr17 27161311 - MYO18A chr17 27401932 - Exonic hg19 BRCA TCGA-B6-A3ZX-01A 4 125 5'UTR-CDS Intra-chr q11.2 q11.2 Oncogene Seq+ 23491 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-TIAF1 FAM222B chr17 27161311 - TIAF1 chr17 27401932 - Exonic hg19 BRCA TCGA-B6-A3ZX-01A 4 125 5'UTR-5'UTR Intra-chr q11.2 q11.2 Oncogene Seq+ 23492 ChimerSeq STARFusion TCGA_RNA-Seq PAPD7-SRD5A1 PAPD7 chr5 6743953 + SRD5A1 chr5 6662929 + Exonic hg19 BRCA TCGA-B6-A3ZX-01A 11 32 CDS-3'UTR Intra-chr p15.31 p15.31 Seq+ 23493 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF10L-PADI4 ARHGEF10L chr1 17983203 + PADI4 chr1 17657464 + Exonic hg19 BRCA TCGA-B6-A3ZX-01A 10 21 Out-of-frame Intra-chr p36.13 Seq+ 23494 ChimerSeq STARFusion TCGA_RNA-Seq FOXK2-MADCAM1 FOXK2 chr17 80478183 + MADCAM1 chr19 501669 + Exonic hg19 BRCA TCGA-B6-A3ZX-01A 5 14 Out-of-frame Inter-chr q25.3 Transcription factor p13.3 Seq+ 23495 ChimerSeq STARFusion TCGA_RNA-Seq EPS15L1-MED26 EPS15L1 chr19 16503115 - MED26 chr19 16689220 - Exonic hg19 BRCA TCGA-B6-A3ZX-01A 4 7 In-Frame Intra-chr p13.11 p13.11 Seq+ 23496 ChimerSeq STARFusion TCGA_RNA-Seq CHMP4B-ZNF341 CHMP4B chr20 32440009 + ZNF341 chr20 32328708 + Exonic hg19 BRCA TCGA-B6-A3ZX-01A 3 7 In-Frame Intra-chr q11.22 q11.22 Transcription factor Seq+ 23497 ChimerSeq STARFusion TCGA_RNA-Seq ARRB1-GDPD5 ARRB1 chr11 75062632 - GDPD5 chr11 75201365 - Exonic hg19 BRCA TCGA-B6-A3ZX-01A 2 8 CDS-5'UTR Intra-chr q13.4 q13.5 Seq+ 23498 ChimerSeq STARFusion TCGA_RNA-Seq PADI4-AKR7A3 PADI4 chr1 17657644 + AKR7A3 chr1 19612866 - Exonic hg19 BRCA TCGA-B6-A3ZX-01A 3 4 Out-of-frame Intra-chr p36.13 Seq+ 23499 ChimerSeq STARFusion TCGA_RNA-Seq AIFM1-ARL3 AIFM1 chrX 129293944 - ARL3 chr10 104465136 - Exonic hg19 BRCA TCGA-D8-A1X9-01A 5 13 Out-of-frame Inter-chr q26.1 q24.32 Seq+ 23500 ChimerSeq STARFusion TCGA_RNA-Seq HCFC1-MECP2 HCFC1 chrX 153216801 - MECP2 chrX 153357765 - Exonic hg19 BRCA TCGA-D8-A1X9-01A 3 21 CDS-5'UTR Intra-chr q28 q28 Transcription factor Seq+ 23501 ChimerSeq STARFusion TCGA_RNA-Seq DNTTIP2-GCLM DNTTIP2 chr1 94341824 - GCLM chr1 94367225 - Exonic hg19 BRCA TCGA-D8-A1X9-01A 5 9 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 23502 ChimerSeq STARFusion TCGA_RNA-Seq LGALS8-EDARADD LGALS8 chr1 236689415 + EDARADD chr1 236645567 + Exonic hg19 BRCA TCGA-D8-A1X9-01A 4 2 Out-of-frame Intra-chr q43 q42.3 Seq+ 23503 ChimerSeq STARFusion TCGA_RNA-Seq APIP-C10orf35 APIP chr11 34937775 - C10orf35 chr10 71391236 + Exonic hg19 BRCA TCGA-E2-A15D-01A 3 17 CDS-5'UTR Inter-chr p13 q22.1 Seq+ 23504 ChimerSeq STARFusion TCGA_RNA-Seq GRIK2-ARMC2 GRIK2 chr6 101847268 + ARMC2 chr6 109274236 + Exonic hg19 BRCA TCGA-E2-A15D-01A 2 8 Out-of-frame Intra-chr q16.3 q21 Seq+ 23505 ChimerSeq STARFusion TCGA_RNA-Seq PSMG4-SLC22A23 PSMG4 chr6 3259430 + SLC22A23 chr6 3298452 - Exonic hg19 BRCA TCGA-E2-A15D-01A 2 1 Out-of-frame Intra-chr p25.2 p25.2 23506 ChimerSeq STARFusion TCGA_RNA-Seq TXNDC16-KTN1 TXNDC16 chr14 53003437 - KTN1 chr14 56128240 + Exonic hg19 BRCA TCGA-E2-A15D-01A 2 0 In-Frame Intra-chr q22.1 q22.3 23507 ChimerSeq STARFusion TCGA_RNA-Seq SAE1-ZBTB45 SAE1 chr19 47646862 + ZBTB45 chr19 59029040 - Exonic hg19 BRCA TCGA-C8-A26Z-01A 13 25 5'UTR-5'UTR Intra-chr q13.32 q13.43 Transcription factor Seq+ 23508 ChimerSeq STARFusion TCGA_RNA-Seq THSD4-LRRC49 THSD4 chr15 71704162 + LRRC49 chr15 71185923 + Exonic hg19 BRCA TCGA-C8-A26Z-01A 5 17 In-Frame Intra-chr q23 q23 Seq+ 23509 ChimerSeq STARFusion TCGA_RNA-Seq ADIPOR2-CACNA2D4 ADIPOR2 chr12 1863680 + CACNA2D4 chr12 1919506 - Exonic hg19 BRCA TCGA-C8-A26Z-01A 2 9 In-Frame Intra-chr p13.33 p13.33 Seq+ 23510 ChimerSeq STARFusion TCGA_RNA-Seq UTRN-HBS1L UTRN chr6 144999714 + HBS1L chr6 135323980 - Exonic hg19 BRCA TCGA-C8-A26Z-01A 2 2 Out-of-frame Intra-chr q24.2 q23.3 Seq+ 23511 ChimerSeq STARFusion TCGA_RNA-Seq UBE2Z-FKBP5 UBE2Z chr17 47000299 + FKBP5 chr6 35604935 - Exonic hg19 BRCA TCGA-C8-A26Z-01A 2 1 In-Frame Inter-chr q21.32 p21.31 Seq+ 23512 ChimerSeq STARFusion TCGA_RNA-Seq RFFL-NLK RFFL chr17 33416124 - NLK chr17 26495474 + Exonic hg19 BRCA TCGA-3C-AALK-01A 6 24 3'UTR-CDS Intra-chr q12 q11.2 CMGC:MAPK Seq+ 23513 ChimerSeq STARFusion TCGA_RNA-Seq NAIP-OCLN NAIP chr5 70269956 - OCLN chr5 68830521 + Exonic hg19 BRCA TCGA-3C-AALK-01A 3 12 Out-of-frame Intra-chr q13.2 q13.2 23514 ChimerSeq STARFusion TCGA_RNA-Seq SKAP1-NR1D1 SKAP1 chr17 46474042 - NR1D1 chr17 38256519 - Exonic hg19 BRCA TCGA-3C-AALK-01A 3 6 CDS-5'UTR Intra-chr q21.32 q21.1 Transcription factor Seq+ 23515 ChimerSeq STARFusion TCGA_RNA-Seq NFIB-HEATR5B NFIB chr9 14313481 - HEATR5B chr2 37208937 - Exonic hg19 BRCA TCGA-A1-A0SB-01A 63 265 Out-of-frame Inter-chr p22.3 Transcription factor p22.2 Seq+ 23516 ChimerSeq STARFusion TCGA_RNA-Seq MYB-NFIB MYB chr6 135521553 + NFIB chr9 14307519 - Exonic hg19 BRCA TCGA-A1-A0SB-01A 7 114 In-Frame Inter-chr q23.3 Oncogene Transcription factor p22.3 Transcription factor KB Pub Seq+ 23517 ChimerSeq STARFusion TCGA_RNA-Seq NFIB-STRN NFIB chr9 14313481 - STRN chr2 37152351 - Exonic hg19 BRCA TCGA-A1-A0SB-01A 8 16 In-Frame Inter-chr p22.3 Transcription factor p22.2 Seq+ 23518 ChimerSeq STARFusion TCGA_RNA-Seq EHD4-FSIP1 EHD4 chr15 42211408 - FSIP1 chr15 39910446 - Exonic hg19 BRCA TCGA-A1-A0SB-01A 5 25 In-Frame Intra-chr q15.1 q14 Seq+ 23519 ChimerSeq STARFusion TCGA_RNA-Seq EHD4-FSIP1 EHD4 chr15 42211408 - FSIP1 chr15 39893127 - Exonic hg19 BRCA TCGA-A1-A0SB-01A 2 25 Out-of-frame Intra-chr q15.1 q14 Seq+ 23520 ChimerSeq STARFusion TCGA_RNA-Seq HEATR5B-MYB HEATR5B chr2 37215789 - MYB chr6 135522777 + Exonic hg19 BRCA TCGA-A1-A0SB-01A 5 10 Out-of-frame Inter-chr p22.2 q23.3 Oncogene Transcription factor Seq+ 23521 ChimerSeq STARFusion TCGA_RNA-Seq APP-ANP32B APP chr21 27394248 - ANP32B chr9 100773572 + Exonic hg19 BRCA TCGA-A1-A0SB-01A 3 1 Out-of-frame Inter-chr q21.3 q22.33 23522 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86351941 + Exonic hg19 BRCA TCGA-A1-A0SB-01A 2 3 Out-of-frame Intra-chr q21.2 q21.2 23523 ChimerSeq STARFusion TCGA_RNA-Seq TUBB2B-PAQR5 TUBB2B chr6 3231790 - PAQR5 chr15 69672223 + Exonic hg19 BRCA TCGA-B6-A0RO-01A 16 32 Out-of-frame Inter-chr p25.2 q23 Seq+ 23524 ChimerSeq STARFusion TCGA_RNA-Seq HHAT-RFWD2 HHAT chr1 210797014 + RFWD2 chr1 175916375 - Exonic hg19 BRCA TCGA-S3-A6ZG-01A 18 36 Out-of-frame Intra-chr q25.2 Tumor suppressor gene Seq+ 23525 ChimerSeq STARFusion TCGA_RNA-Seq HIVEP1-LOC100506207 HIVEP1 chr6 12089470 + LOC100506207 chr6 8784424 + Exonic hg19 BRCA TCGA-S3-A6ZG-01A 7 22 CDS-5'UTR Intra-chr p24.1 Tumor suppressor gene Transcription factor 23526 ChimerSeq STARFusion TCGA_RNA-Seq ARRB1-PICALM ARRB1 chr11 75062632 - PICALM chr11 85726006 - Exonic hg19 BRCA TCGA-S3-A6ZG-01A 3 25 In-Frame Intra-chr q13.4 q14.2 Seq+ 23527 ChimerSeq STARFusion TCGA_RNA-Seq PSMD4-COPA PSMD4 chr1 151227284 + COPA chr1 160278966 - Exonic hg19 BRCA TCGA-S3-A6ZG-01A 2 8 Out-of-frame Intra-chr q21.3 q23.2 Seq+ 23528 ChimerSeq STARFusion TCGA_RNA-Seq GABBR2-PTPRT GABBR2 chr9 101052560 - PTPRT chr20 40706453 - Exonic hg19 BRCA TCGA-S3-A6ZG-01A 3 2 Out-of-frame Inter-chr q22.33 q13.11 Oncogene Tumor suppressor gene 23529 ChimerSeq STARFusion TCGA_RNA-Seq DDB1-TMEM258 DDB1 chr11 61076455 - TMEM258 chr11 61556707 - Exonic hg19 BRCA TCGA-AR-A256-01A 112 136 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 23530 ChimerSeq STARFusion TCGA_RNA-Seq ST14-ST7 ST14 chr11 130029955 + ST7 chr7 116739816 + Exonic hg19 BRCA TCGA-AR-A256-01A 26 71 Out-of-frame Inter-chr q24.3 q31.2 Tumor suppressor gene Seq+ 23531 ChimerSeq STARFusion TCGA_RNA-Seq CHMP4B-CBFA2T2 CHMP4B chr20 32399464 + CBFA2T2 chr20 32232153 + Exonic hg19 BRCA TCGA-AR-A256-01A 31 42 Out-of-frame Intra-chr q11.22 q11.21 Seq+ 23532 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF2-SSR2 ARHGEF2 chr1 155932724 - SSR2 chr1 155981678 - Exonic hg19 BRCA TCGA-AR-A256-01A 12 72 In-Frame Intra-chr q22 q22 Seq+ 23533 ChimerSeq STARFusion TCGA_RNA-Seq CCNY-DENND1A CCNY chr10 35626135 + DENND1A chr9 126520101 - Exonic hg19 BRCA TCGA-AR-A256-01A 9 58 Out-of-frame Inter-chr p11.21 q33.3 Seq+ 23534 ChimerSeq STARFusion TCGA_RNA-Seq EXOC4-SLC25A13 EXOC4 chr7 133059756 + SLC25A13 chr7 95776008 - Exonic hg19 BRCA TCGA-AR-A256-01A 10 54 In-Frame Intra-chr q33 q21.3 Seq+ 23535 ChimerSeq STARFusion TCGA_RNA-Seq TIA1-TGFA TIA1 chr2 70475537 - TGFA chr2 70692868 - Exonic hg19 BRCA TCGA-AR-A256-01A 7 59 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 23536 ChimerSeq STARFusion TCGA_RNA-Seq TIA1-TGFA TIA1 chr2 70475537 - TGFA chr2 70692865 - Exonic hg19 BRCA TCGA-AR-A256-01A 5 59 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 23537 ChimerSeq STARFusion TCGA_RNA-Seq CAMK2G-AGAP5 CAMK2G chr10 75632747 - AGAP5 chr10 75442552 - Exonic hg19 BRCA TCGA-AR-A256-01A 12 24 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 23538 ChimerSeq STARFusion TCGA_RNA-Seq CCNY-DENND1A CCNY chr10 35626135 + DENND1A chr9 126439068 - Exonic hg19 BRCA TCGA-AR-A256-01A 2 58 Out-of-frame Inter-chr p11.21 q33.3 Seq+ 23539 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB6-UBE3C DNAJB6 chr7 157160177 + UBE3C chr7 157041062 + Exonic hg19 BRCA TCGA-AR-A256-01A 6 27 Out-of-frame Intra-chr q36.3 q36.3 23540 ChimerSeq STARFusion TCGA_RNA-Seq SMARCA4-ICAM1 SMARCA4 chr19 11071850 + ICAM1 chr19 10385441 + Exonic hg19 BRCA TCGA-AR-A256-01A 7 22 5'UTR-CDS Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 23541 ChimerSeq STARFusion TCGA_RNA-Seq WWP2-TSEN54 WWP2 chr16 69820983 + TSEN54 chr17 73517490 + Exonic hg19 BRCA TCGA-AR-A256-01A 5 29 Out-of-frame Inter-chr q22.1 q25.1 Seq+ 23542 ChimerSeq STARFusion TCGA_RNA-Seq BIRC6-TTC27 BIRC6 chr2 32774548 + TTC27 chr2 33007693 + Exonic hg19 BRCA TCGA-AR-A256-01A 6 23 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 23543 ChimerSeq STARFusion TCGA_RNA-Seq PITPNM2-LOC100190940 PITPNM2 chr12 123594932 - LOC100190940 chr12 130521562 - Exonic hg19 BRCA TCGA-AR-A256-01A 7 18 5'UTR-3'UTR Intra-chr q24.31 23544 ChimerSeq STARFusion TCGA_RNA-Seq LOC100506469-MTMR3 LOC100506469 chr19 36032653 - MTMR3 chr22 30353025 + Exonic hg19 BRCA TCGA-AR-A256-01A 7 14 3'UTR-5'UTR Inter-chr q12.2 23545 ChimerSeq STARFusion TCGA_RNA-Seq TSC2-TMEM204 TSC2 chr16 2098066 + TMEM204 chr16 1604783 + Exonic hg19 BRCA TCGA-AR-A256-01A 4 21 5'UTR-CDS Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 23546 ChimerSeq STARFusion TCGA_RNA-Seq TSC2-TMEM204 TSC2 chr16 2098754 + TMEM204 chr16 1604783 + Exonic hg19 BRCA TCGA-AR-A256-01A 4 21 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 23547 ChimerSeq STARFusion TCGA_RNA-Seq GIGYF2-CHRND GIGYF2 chr2 233613792 + CHRND chr2 233398641 + Exonic hg19 BRCA TCGA-AR-A256-01A 3 16 In-Frame Intra-chr q37.1 q37.1 Seq+ 23548 ChimerSeq STARFusion TCGA_RNA-Seq PGGT1B-KIAA0825 PGGT1B chr5 114588834 - KIAA0825 chr5 93489829 - Exonic hg19 BRCA TCGA-AR-A256-01A 2 15 Out-of-frame Intra-chr q22.3 q15 Seq+ 23549 ChimerSeq STARFusion TCGA_RNA-Seq INADL-HSD52 INADL chr1 62393501 + HSD52 chr1 59599002 - Exonic hg19 BRCA TCGA-AR-A256-01A 3 9 CDS-3'UTR Intra-chr p32.1 23550 ChimerSeq STARFusion TCGA_RNA-Seq RCAN1-RUNX1 RCAN1 chr21 35987059 - RUNX1 chr21 36171759 - Exonic hg19 BRCA TCGA-AR-A256-01A 4 2 Out-of-frame Intra-chr q22.12 q22.12 Oncogene Tumor suppressor gene Transcription factor Seq+ 23551 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC14-SYNJ2 ZDHHC14 chr6 158074659 + SYNJ2 chr6 158509692 + Exonic hg19 BRCA TCGA-AR-A256-01A 3 5 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 23552 ChimerSeq STARFusion TCGA_RNA-Seq SPOPL-SSFA2 SPOPL chr2 139259689 + SSFA2 chr2 182756759 + Exonic hg19 BRCA TCGA-AR-A256-01A 3 3 5'UTR-5'UTR Intra-chr q22.1 q31.3 Seq+ 23553 ChimerSeq STARFusion TCGA_RNA-Seq STK17B-HECW2 STK17B chr2 197008284 - HECW2 chr2 197208488 - Exonic hg19 BRCA TCGA-AR-A256-01A 3 3 In-Frame Intra-chr q32.3 q32.3 Seq+ 23554 ChimerSeq STARFusion TCGA_RNA-Seq ABTB2-APIP ABTB2 chr11 34186233 - APIP chr11 34916657 - Exonic hg19 BRCA TCGA-AR-A256-01A 2 6 Out-of-frame Intra-chr p13 p13 Seq+ 23555 ChimerSeq STARFusion TCGA_RNA-Seq EPS15L1-RABGAP1 EPS15L1 chr19 16472590 - RABGAP1 chr9 125777822 + Exonic hg19 BRCA TCGA-AR-A256-01A 2 6 Out-of-frame Inter-chr p13.11 q33.2 Seq+ 23556 ChimerSeq STARFusion TCGA_RNA-Seq ILF3-TP53 ILF3 chr19 10765163 + TP53 chr17 7579940 - Exonic hg19 BRCA TCGA-AR-A256-01A 2 4 5'UTR-5'UTR Inter-chr p13.2 p13.1 Oncogene Tumor suppressor gene Transcription factor Seq+ 23557 ChimerSeq STARFusion TCGA_RNA-Seq CA3-MYBL1 CA3 chr8 86356355 + MYBL1 chr8 67479227 - Exonic hg19 BRCA TCGA-AR-A256-01A 2 3 In-Frame Intra-chr q21.2 q13.1 Transcription factor Seq+ 23558 ChimerSeq STARFusion TCGA_RNA-Seq HK1-SUPV3L1 HK1 chr10 71103745 + SUPV3L1 chr10 70967549 + Exonic hg19 BRCA TCGA-AR-A256-01A 2 3 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 23559 ChimerSeq STARFusion TCGA_RNA-Seq BUB1B-THBS1 BUB1B chr15 40462882 + THBS1 chr15 39879548 + Exonic hg19 BRCA TCGA-AR-A256-01A 2 1 Out-of-frame Intra-chr q15.1 Oncogene q14 Oncogene Tumor suppressor gene 23560 ChimerSeq STARFusion TCGA_RNA-Seq STAU1-CTSA STAU1 chr20 47790732 - CTSA chr20 44519812 + Exonic hg19 BRCA TCGA-AR-A0TX-01A 81 663 5'UTR-5'UTR Intra-chr q13.13 q13.12 Seq+ 23561 ChimerSeq STARFusion TCGA_RNA-Seq RARA-ZNF595 RARA chr17 38487648 + ZNF595 chr4 59323 + Exonic hg19 BRCA TCGA-AR-A0TX-01A 125 463 In-Frame Inter-chr q21.2 Oncogene Transcription factor p16.3 Transcription factor Seq+ 23562 ChimerSeq STARFusion TCGA_RNA-Seq STAU1-CTSA STAU1 chr20 47804653 - CTSA chr20 44519812 + Exonic hg19 BRCA TCGA-AR-A0TX-01A 24 637 5'UTR-5'UTR Intra-chr q13.13 q13.12 Seq+ 23563 ChimerSeq STARFusion TCGA_RNA-Seq PMEPA1-PTGIS PMEPA1 chr20 56284530 - PTGIS chr20 48130932 - Exonic hg19 BRCA TCGA-AR-A0TX-01A 21 66 Out-of-frame Intra-chr q13.31 q13.13 Seq+ 23564 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP23-ASIC2 ARHGAP23 chr17 36636124 + ASIC2 chr17 31351032 - Exonic hg19 BRCA TCGA-AR-A0TX-01A 24 45 In-Frame Intra-chr q12 q12 Seq+ 23565 ChimerSeq STARFusion TCGA_RNA-Seq ABAT-C16orf62 ABAT chr16 8768568 + C16orf62 chr16 19663298 + Exonic hg19 BRCA TCGA-AR-A0TX-01A 13 80 5'UTR-CDS Intra-chr p13.2 p12.3 Seq+ 23566 ChimerSeq STARFusion TCGA_RNA-Seq TMEM159-DNAH3 TMEM159 chr16 21185469 + DNAH3 chr16 21074004 - Exonic hg19 BRCA TCGA-AR-A0TX-01A 11 75 In-Frame Intra-chr p12.3 Seq+ 23567 ChimerSeq STARFusion TCGA_RNA-Seq ARFGEF2-FAM19A5 ARFGEF2 chr20 47538547 + FAM19A5 chr22 49042409 + Exonic hg19 BRCA TCGA-AR-A0TX-01A 3 69 In-Frame Inter-chr q13.13 q13.32 Seq+ 23568 ChimerSeq STARFusion TCGA_RNA-Seq CACNB1-MLLT6 CACNB1 chr17 37339966 - MLLT6 chr17 36878931 + Exonic hg19 BRCA TCGA-AR-A0TX-01A 10 21 Out-of-frame Intra-chr q12 q12 Seq+ 23569 ChimerSeq STARFusion TCGA_RNA-Seq PPM1H-USP15 PPM1H chr12 63328272 - USP15 chr12 62687960 + Exonic hg19 BRCA TCGA-AR-A0TX-01A 5 20 In-Frame Intra-chr q14.2 q14.1 Seq+ 23570 ChimerSeq STARFusion TCGA_RNA-Seq C16orf62-ABCC6P1 C16orf62 chr16 19644494 + ABCC6P1 chr16 18593728 + Exonic hg19 BRCA TCGA-AR-A0TX-01A 2 22 CDS-5'UTR Intra-chr p12.3 p12.3 Seq+ 23571 ChimerSeq STARFusion TCGA_RNA-Seq THRA-CACNB1 THRA chr17 38233292 + CACNB1 chr17 37347795 - Exonic hg19 BRCA TCGA-AR-A0TX-01A 3 12 Out-of-frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q12 Seq+ 23572 ChimerSeq STARFusion TCGA_RNA-Seq PPM1H-SRGAP1 PPM1H chr12 63225894 - SRGAP1 chr12 64536075 + Exonic hg19 BRCA TCGA-AR-A0TX-01A 4 7 In-Frame Intra-chr q14.2 q14.2 Seq+ 23573 ChimerSeq STARFusion TCGA_RNA-Seq THRA-CACNB1 THRA chr17 38233191 + CACNB1 chr17 37343854 - Exonic hg19 BRCA TCGA-AR-A0TX-01A 2 12 Out-of-frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q12 Seq+ 23574 ChimerSeq STARFusion TCGA_RNA-Seq COQ7-OSBPL2 COQ7 chr16 19087182 + OSBPL2 chr20 60831113 + Exonic hg19 BRCA TCGA-AR-A0TX-01A 2 7 CDS-5'UTR Inter-chr p12.3 q13.33 Seq+ 23575 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-PLEKHA2 WHSC1L1 chr8 38146005 - PLEKHA2 chr8 38826939 + Exonic hg19 BRCA TCGA-OL-A66J-01A 4 6 In-Frame Intra-chr p11.23 Tumor suppressor gene p11.22 Seq+ 23576 ChimerSeq STARFusion TCGA_RNA-Seq CLPB-TMEM134 CLPB chr11 72141356 - TMEM134 chr11 67235563 - Exonic hg19 BRCA TCGA-OL-A66J-01A 2 5 In-Frame Intra-chr q13.4 q13.2 Seq+ 23577 ChimerSeq STARFusion TCGA_RNA-Seq MLL3-NPEPPS MLL3 chr7 151949024 - NPEPPS chr17 45668083 + Exonic hg19 BRCA TCGA-A8-A075-01A 2 0 Out-of-frame Inter-chr Tumor suppressor gene q21.32 23578 ChimerSeq STARFusion TCGA_RNA-Seq OTUD5-TEX101 OTUD5 chrX 48783123 - TEX101 chr19 43906918 + Exonic hg19 BRCA TCGA-A8-A075-01A 2 0 CDS-5'UTR Inter-chr p11.23 q13.31 23579 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-SEC14L1 SEPT9 chr17 75303279 + SEC14L1 chr17 75201358 + Exonic hg19 BRCA TCGA-D8-A1JF-01A 76 136 Out-of-frame Intra-chr q25.2 Seq+ 23580 ChimerSeq STARFusion TCGA_RNA-Seq MFSD11-IGKC MFSD11 chr17 74777386 + IGKC chr2 89161068 - Exonic hg19 BRCA TCGA-D8-A1JF-01A 41 1 Out-of-frame Inter-chr q25.1 p11.2 23581 ChimerSeq STARFusion TCGA_RNA-Seq MYH10-IGH@ MYH10 chr17 8417106 - IGH@ chr14 106209408 - Exonic hg19 BRCA TCGA-D8-A1JF-01A 30 1 Out-of-frame Inter-chr p13.1 32.33 23582 ChimerSeq STARFusion TCGA_RNA-Seq NFKBIB-LGALS7B NFKBIB chr19 39390851 + LGALS7B chr19 39281329 + Exonic hg19 BRCA TCGA-D8-A1JF-01A 20 29 In-Frame Intra-chr Seq+ 23583 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 BRCA TCGA-D8-A1JF-01A 23 0 Out-of-frame Inter-chr q13.33 p21.1 23584 ChimerSeq STARFusion TCGA_RNA-Seq MYH10-IGHG4 MYH10 chr17 8417106 - IGHG4 chr14 106111127 - Exonic hg19 BRCA TCGA-D8-A1JF-01A 21 1 Out-of-frame Inter-chr p13.1 23585 ChimerSeq STARFusion TCGA_RNA-Seq MYH10-IGH@ MYH10 chr17 8417106 - IGH@ chr14 106136182 - Exonic hg19 BRCA TCGA-D8-A1JF-01A 19 1 Out-of-frame Inter-chr p13.1 32.33 23586 ChimerSeq STARFusion TCGA_RNA-Seq MYH10-IGHG4 MYH10 chr17 8417106 - IGHG4 chr14 106136182 - Exonic hg19 BRCA TCGA-D8-A1JF-01A 17 1 Out-of-frame Inter-chr p13.1 23587 ChimerSeq STARFusion TCGA_RNA-Seq MYH10-IGH@ MYH10 chr17 8417107 - IGH@ chr14 106237744 - Exonic hg19 BRCA TCGA-D8-A1JF-01A 11 1 Out-of-frame Inter-chr p13.1 32.33 23588 ChimerSeq STARFusion TCGA_RNA-Seq CIC-RPS19 CIC chr19 42772746 + RPS19 chr19 42373101 + Exonic hg19 BRCA TCGA-A7-A6VV-01A 33 47 5'UTR-CDS Intra-chr q13.2 Oncogene Tumor suppressor gene Transcription factor q13.2 Seq+ 23589 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF3-SLIT1 TM9SF3 chr10 98346491 - SLIT1 chr10 98808875 - Exonic hg19 BRCA TCGA-A7-A6VV-01A 25 32 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 23590 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-SLC30A9 NIPBL chr5 36877280 + SLC30A9 chr4 42065003 + Exonic hg19 BRCA TCGA-A7-A6VV-01A 13 72 5'UTR-CDS Inter-chr p13.2 p13 Seq+ 23591 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-SLC30A9 NIPBL chr5 36877280 + SLC30A9 chr4 42062208 + Exonic hg19 BRCA TCGA-A7-A6VV-01A 11 70 5'UTR-CDS Inter-chr p13.2 p13 Seq+ 23592 ChimerSeq STARFusion TCGA_RNA-Seq ARRB1-GDPD5 ARRB1 chr11 75062632 - GDPD5 chr11 75201365 - Exonic hg19 BRCA TCGA-A7-A6VV-01A 6 29 CDS-5'UTR Intra-chr q13.4 q13.5 Seq+ 23593 ChimerSeq STARFusion TCGA_RNA-Seq RCAN1-RUNX1 RCAN1 chr21 35987059 - RUNX1 chr21 36171759 - Exonic hg19 BRCA TCGA-A7-A6VV-01A 5 26 Out-of-frame Intra-chr q22.12 q22.12 Oncogene Tumor suppressor gene Transcription factor Seq+ 23594 ChimerSeq STARFusion TCGA_RNA-Seq SLC35A3-HIAT1 SLC35A3 chr1 100435718 + HIAT1 chr1 100544007 + Exonic hg19 BRCA TCGA-A7-A6VV-01A 2 23 5'UTR-CDS Intra-chr p21.2 23595 ChimerSeq STARFusion TCGA_RNA-Seq APP-CYYR1 APP chr21 27462259 - CYYR1 chr21 27938687 - Exonic hg19 BRCA TCGA-A7-A6VV-01A 3 16 In-Frame Intra-chr q21.3 q21.3 23596 ChimerSeq STARFusion TCGA_RNA-Seq ABTB2-LMO2 ABTB2 chr11 34378248 - LMO2 chr11 33903433 - Exonic hg19 BRCA TCGA-A7-A6VV-01A 4 8 CDS-5'UTR Intra-chr p13 p13 Seq+ 23597 ChimerSeq STARFusion TCGA_RNA-Seq ALG6-UBE2U ALG6 chr1 63836730 + UBE2U chr1 64707335 + Exonic hg19 BRCA TCGA-A7-A6VV-01A 3 12 In-Frame Intra-chr p31.3 p31.3 Seq+ 23598 ChimerSeq STARFusion TCGA_RNA-Seq APP-CYYR1 APP chr21 27484296 - CYYR1 chr21 27852748 - Exonic hg19 BRCA TCGA-A7-A6VV-01A 2 16 Out-of-frame Intra-chr q21.3 q21.3 23599 ChimerSeq STARFusion TCGA_RNA-Seq ARPC1A-ZNF789 ARPC1A chr7 98942138 + ZNF789 chr7 99098346 + Exonic hg19 BRCA TCGA-A7-A6VV-01A 2 15 CDS-3'UTR Intra-chr q22.1 q22.1 Transcription factor Seq+ 23600 ChimerSeq STARFusion TCGA_RNA-Seq ABTB2-LMO2 ABTB2 chr11 34378248 - LMO2 chr11 33891132 - Exonic hg19 BRCA TCGA-A7-A6VV-01A 3 8 In-Frame Intra-chr p13 p13 Seq+ 23601 ChimerSeq STARFusion TCGA_RNA-Seq SYNE2-RTN1 SYNE2 chr14 64434564 + RTN1 chr14 60213199 - Exonic hg19 BRCA TCGA-A7-A6VV-01A 4 4 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 23602 ChimerSeq STARFusion TCGA_RNA-Seq NAIP-OCLN NAIP chr5 70269956 - OCLN chr5 68830521 + Exonic hg19 BRCA TCGA-A7-A6VV-01A 3 6 Out-of-frame Intra-chr q13.2 q13.2 23603 ChimerSeq STARFusion TCGA_RNA-Seq RBM4-ACTN3 RBM4 chr11 66406223 + ACTN3 chr11 66324604 + Exonic hg19 BRCA TCGA-A7-A6VV-01A 3 6 5'UTR-5'UTR Intra-chr q13.2 Tumor suppressor gene q13.2 Seq+ 23604 ChimerSeq STARFusion TCGA_RNA-Seq PHRF1-TSPAN4 PHRF1 chr11 576592 + TSPAN4 chr11 850288 + Exonic hg19 BRCA TCGA-A7-A6VV-01A 2 8 5'UTR-5'UTR Intra-chr p15.5 p15.5 Seq+ 23605 ChimerSeq STARFusion TCGA_RNA-Seq IGF2R-SLC22A1 IGF2R chr6 160412355 + SLC22A1 chr6 160564573 + Exonic hg19 BRCA TCGA-A7-A6VV-01A 2 7 In-Frame Intra-chr q25.3 Oncogene Tumor suppressor gene q25.3 23606 ChimerSeq STARFusion TCGA_RNA-Seq IGF2R-SLC22A1 IGF2R chr6 160412355 + SLC22A1 chr6 160551136 + Exonic hg19 BRCA TCGA-A7-A6VV-01A 2 7 Out-of-frame Intra-chr q25.3 Oncogene Tumor suppressor gene q25.3 23607 ChimerSeq STARFusion TCGA_RNA-Seq PSMD3-SRCIN1 PSMD3 chr17 38137443 + SRCIN1 chr17 36716008 - Exonic hg19 BRCA TCGA-E2-A152-01A 21 7 In-Frame Intra-chr q21.1 q12 Seq+ 23608 ChimerSeq STARFusion TCGA_RNA-Seq SLC2A1-ERBB2 SLC2A1 chr1 43392014 - ERBB2 chr17 37868586 + Exonic hg19 BRCA TCGA-E2-A152-01A 3 0 Out-of-frame Inter-chr p34.2 q12 Oncogene 23609 ChimerSeq STARFusion TCGA_RNA-Seq APBB2-UBE2K APBB2 chr4 40936473 - UBE2K chr4 39739040 + Exonic hg19 BRCA TCGA-E2-A152-01A 2 0 In-Frame Intra-chr p13 p14 23610 ChimerSeq STARFusion TCGA_RNA-Seq PCF11-SPON1 PCF11 chr11 82868673 + SPON1 chr11 14264878 + Exonic hg19 BRCA TCGA-AR-A24H-01A 33 120 In-Frame Intra-chr q14.1 p15.2 Seq+ 23611 ChimerSeq STARFusion TCGA_RNA-Seq RB1-LINC00441 RB1 chr13 48881542 + LINC00441 chr13 48871266 - Exonic hg19 BRCA TCGA-AR-A24H-01A 8 29 CDS-3'UTR Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Seq+ 23612 ChimerSeq STARFusion TCGA_RNA-Seq ASXL2-HSPH1 ASXL2 chr2 26101035 - HSPH1 chr13 31733000 - Exonic hg19 BRCA TCGA-AR-A24H-01A 6 20 Out-of-frame Inter-chr p23.3 q12.3 Seq+ 23613 ChimerSeq STARFusion TCGA_RNA-Seq MCFD2-SRBD1 MCFD2 chr2 47134949 - SRBD1 chr2 45647033 - Exonic hg19 BRCA TCGA-AR-A24H-01A 3 25 In-Frame Intra-chr p21 p21 Seq+ 23614 ChimerSeq STARFusion TCGA_RNA-Seq MCFD2-SRBD1 MCFD2 chr2 47136162 - SRBD1 chr2 45715470 - Exonic hg19 BRCA TCGA-AR-A24H-01A 2 25 In-Frame Intra-chr p21 p21 Seq+ 23615 ChimerSeq STARFusion TCGA_RNA-Seq ANXA7-MALSU1 ANXA7 chr10 75173770 - MALSU1 chr7 23340458 + Exonic hg19 BRCA TCGA-AR-A24H-01A 3 0 5'UTR-CDS Inter-chr q22.2 Tumor suppressor gene p15.3 Seq+ 23616 ChimerSeq STARFusion TCGA_RNA-Seq RPS19BP1-KCNE1 RPS19BP1 chr22 39928400 - KCNE1 chr21 35831034 - Exonic hg19 BRCA TCGA-EW-A424-01A 12 23 CDS-5'UTR Inter-chr q13.1 q22.12 Seq+ 23617 ChimerSeq STARFusion TCGA_RNA-Seq UBE3D-SERPINB1 UBE3D chr6 83775361 - SERPINB1 chr6 2840828 - Exonic hg19 BRCA TCGA-EW-A424-01A 7 16 CDS-5'UTR Intra-chr q14.1 p25.2 Seq+ 23618 ChimerSeq STARFusion TCGA_RNA-Seq KRAS-C2CD5 KRAS chr12 25398208 - C2CD5 chr12 22610095 - Exonic hg19 BRCA TCGA-AR-A2LM-01A 7 31 Out-of-frame Intra-chr p12.1 Oncogene p12.1 23619 ChimerSeq STARFusion TCGA_RNA-Seq RECQL-PEMT RECQL chr12 21652489 - PEMT chr17 17480341 - Exonic hg19 BRCA TCGA-AR-A2LM-01A 6 3 Out-of-frame Inter-chr p12.1 p11.2 Seq+ 23620 ChimerSeq STARFusion TCGA_RNA-Seq ST8SIA1-IFLTD1 ST8SIA1 chr12 22401940 - IFLTD1 chr12 25702480 - Exonic hg19 BRCA TCGA-AR-A2LM-01A 2 4 In-Frame Intra-chr p12.1 Tumor suppressor gene Seq+ 23621 ChimerSeq STARFusion TCGA_RNA-Seq ST8SIA1-IFLTD1 ST8SIA1 chr12 22401940 - IFLTD1 chr12 25679889 - Exonic hg19 BRCA TCGA-AR-A2LM-01A 2 4 In-Frame Intra-chr p12.1 Tumor suppressor gene Seq+ 23622 ChimerSeq STARFusion TCGA_RNA-Seq ZNF613-CYP2A6 ZNF613 chr19 52433149 + CYP2A6 chr19 41356385 - Exonic hg19 BRCA TCGA-AR-A0U3-01A 8 194 5'UTR-5'UTR Intra-chr q13.41 Transcription factor q13.2 Seq+ 23623 ChimerSeq STARFusion TCGA_RNA-Seq ZNF613-CYP2A6 ZNF613 chr19 52433149 + CYP2A6 chr19 41356256 - Exonic hg19 BRCA TCGA-AR-A0U3-01A 7 160 5'UTR-CDS Intra-chr q13.41 Transcription factor q13.2 Seq+ 23624 ChimerSeq STARFusion TCGA_RNA-Seq ZNF613-CYP2A6 ZNF613 chr19 52430793 + CYP2A6 chr19 41356385 - Exonic hg19 BRCA TCGA-AR-A0U3-01A 6 160 5'UTR-5'UTR Intra-chr q13.41 Transcription factor q13.2 Seq+ 23625 ChimerSeq STARFusion TCGA_RNA-Seq ZNF613-CYP2A6 ZNF613 chr19 52430772 + CYP2A6 chr19 41356385 - Exonic hg19 BRCA TCGA-AR-A0U3-01A 6 160 Out-of-frame Intra-chr q13.41 Transcription factor q13.2 Seq+ 23626 ChimerSeq STARFusion TCGA_RNA-Seq TCF3-SYTL5 TCF3 chr19 1615284 - SYTL5 chrX 37985841 + Exonic hg19 BRCA TCGA-AR-A0U3-01A 28 69 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p11.4 Seq+ 23627 ChimerSeq STARFusion TCGA_RNA-Seq ZNF613-CYP2A6 ZNF613 chr19 52433149 + CYP2A6 chr19 41354668 - Exonic hg19 BRCA TCGA-AR-A0U3-01A 5 160 5'UTR-CDS Intra-chr q13.41 Transcription factor q13.2 Seq+ 23628 ChimerSeq STARFusion TCGA_RNA-Seq ZNF613-CYP2A6 ZNF613 chr19 52433149 + CYP2A6 chr19 41388169 - Exonic hg19 BRCA TCGA-AR-A0U3-01A 4 160 5'UTR-5'UTR Intra-chr q13.41 Transcription factor q13.2 Seq+ 23629 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC1-EBLN1 DNAJC1 chr10 22292142 - EBLN1 chr10 22501894 - Exonic hg19 BRCA TCGA-AR-A0U3-01A 23 42 CDS-5'UTR Intra-chr p12.31 p12.31 Seq+ 23630 ChimerSeq STARFusion TCGA_RNA-Seq TCF3-SYTL5 TCF3 chr19 1615685 - SYTL5 chrX 37985841 + Exonic hg19 BRCA TCGA-AR-A0U3-01A 6 68 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p11.4 Seq+ 23631 ChimerSeq STARFusion TCGA_RNA-Seq LINC00674-PITPNC1 LINC00674 chr17 66098100 + PITPNC1 chr17 65548373 + Exonic hg19 BRCA TCGA-AR-A0U3-01A 13 22 Out-of-frame Intra-chr q24.2 q24.2 23632 ChimerSeq STARFusion TCGA_RNA-Seq EID2-C19orf54 EID2 chr19 40030169 - C19orf54 chr19 41257386 - Exonic hg19 BRCA TCGA-AR-A0U3-01A 5 9 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 23633 ChimerSeq STARFusion TCGA_RNA-Seq FSIP1-THBS1 FSIP1 chr15 39909936 - THBS1 chr15 39887563 + Exonic hg19 BRCA TCGA-AR-A0U3-01A 4 13 In-Frame Intra-chr q14 q14 Oncogene Tumor suppressor gene 23634 ChimerSeq STARFusion TCGA_RNA-Seq FAM118B-DDX25 FAM118B chr11 126081725 + DDX25 chr11 125791086 + Exonic hg19 BRCA TCGA-AR-A0U3-01A 6 2 5'UTR-CDS Intra-chr q24.2 q24.2 Seq+ 23635 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF18-INSR ARHGEF18 chr19 7509340 + INSR chr19 7267907 - Exonic hg19 BRCA TCGA-AR-A0U3-01A 4 2 Out-of-frame Intra-chr p13.2 p13.2 TK:InsR Seq+ 23636 ChimerSeq STARFusion TCGA_RNA-Seq AP5S1-RNF24 AP5S1 chr20 3802940 + RNF24 chr20 3928926 - Exonic hg19 BRCA TCGA-AR-A0U3-01A 3 4 In-Frame Intra-chr p13 p13 Seq+ 23637 ChimerSeq STARFusion TCGA_RNA-Seq RNF24-ISM1 RNF24 chr20 3925824 - ISM1 chr20 13260281 + Exonic hg19 BRCA TCGA-AR-A0U3-01A 2 6 In-Frame Intra-chr p13 p12.1 Seq+ 23638 ChimerSeq STARFusion TCGA_RNA-Seq TMX1-C14orf166 TMX1 chr14 51716483 + C14orf166 chr14 52466426 + Exonic hg19 BRCA TCGA-AR-A0U3-01A 2 5 In-Frame Intra-chr q22.1 q22.1 Seq+ 23639 ChimerSeq STARFusion TCGA_RNA-Seq EVL-TRAF3 EVL chr14 100563995 + TRAF3 chr14 103296671 + Exonic hg19 BRCA TCGA-AR-A0U3-01A 2 4 CDS-5'UTR Intra-chr q32.2 q32.32 Seq+ 23640 ChimerSeq STARFusion TCGA_RNA-Seq NEDD4L-TLN2 NEDD4L chr18 55711940 + TLN2 chr15 63063163 + Exonic hg19 BRCA TCGA-A8-A06P-01A 5 6 In-Frame Inter-chr q21.31 Tumor suppressor gene q22.2 Seq+ 23641 ChimerSeq STARFusion TCGA_RNA-Seq SRSF5-EIF5B SRSF5 chr14 70235968 + EIF5B chr2 99977611 + Exonic hg19 BRCA TCGA-A8-A06P-01A 2 0 In-Frame Inter-chr q24.1 q11.2 23642 ChimerSeq STARFusion TCGA_RNA-Seq SSH1-CORO1C SSH1 chr12 109251204 - CORO1C chr12 109095099 - Exonic hg19 BRCA TCGA-AC-A3HN-01A 2 1 CDS-5'UTR Intra-chr q24.11 q24.11 23643 ChimerSeq STARFusion TCGA_RNA-Seq SCAI-TOX3 SCAI chr9 127904912 - TOX3 chr16 52484458 - Exonic hg19 BRCA TCGA-E9-A3HO-01A 2 8 Out-of-frame Inter-chr q33.3 q12.1 Seq+ 23644 ChimerSeq STARFusion TCGA_RNA-Seq ATP5C1-P2RY11 ATP5C1 chr10 7830177 + P2RY11 chr19 10225793 + Exonic hg19 BRCA TCGA-E9-A3HO-01A 3 1 Out-of-frame Inter-chr p14 p13.2 23645 ChimerSeq STARFusion TCGA_RNA-Seq CPT1A-CHKA CPT1A chr11 68529003 - CHKA chr11 67821514 - Exonic hg19 BRCA TCGA-A8-A08G-01A 80 318 In-Frame Intra-chr q13.3 q13.2 Seq+ 23646 ChimerSeq STARFusion TCGA_RNA-Seq IPO7-RENBP IPO7 chr11 9430186 + RENBP chrX 153201029 - Exonic hg19 BRCA TCGA-A8-A08G-01A 64 119 Out-of-frame Inter-chr p15.4 q28 Seq+ 23647 ChimerSeq STARFusion TCGA_RNA-Seq SNRPA1-PHRF1 SNRPA1 chr15 101832167 - PHRF1 chr11 601574 + Exonic hg19 BRCA TCGA-A8-A08G-01A 15 27 Out-of-frame Inter-chr q26.3 p15.5 Seq+ 23648 ChimerSeq STARFusion TCGA_RNA-Seq ENOX2-OSBPL5 ENOX2 chrX 129761932 - OSBPL5 chr11 3150399 - Exonic hg19 BRCA TCGA-A8-A08G-01A 8 20 CDS-5'UTR Inter-chr q26.1 p15.4 Seq+ 23649 ChimerSeq STARFusion TCGA_RNA-Seq UBAP2-TEAD1 UBAP2 chr9 33996221 - TEAD1 chr11 12901255 + Exonic hg19 BRCA TCGA-A8-A08G-01A 3 28 In-Frame Inter-chr p13.3 p15.3 Transcription factor Seq+ 23650 ChimerSeq STARFusion TCGA_RNA-Seq SNRPA1-PHRF1 SNRPA1 chr15 101832167 - PHRF1 chr11 605119 + Exonic hg19 BRCA TCGA-A8-A08G-01A 2 27 In-Frame Inter-chr q26.3 p15.5 Seq+ 23651 ChimerSeq STARFusion TCGA_RNA-Seq METTL16-KDM6B METTL16 chr17 2367502 - KDM6B chr17 7749190 + Exonic hg19 BRCA TCGA-A8-A08G-01A 3 18 In-Frame Intra-chr p13.3 p13.1 Seq+ 23652 ChimerSeq STARFusion TCGA_RNA-Seq PHRF1-LRRC56 PHRF1 chr11 598502 + LRRC56 chr11 549902 + Exonic hg19 BRCA TCGA-A8-A08G-01A 4 11 Out-of-frame Intra-chr p15.5 p15.5 Seq+ 23653 ChimerSeq STARFusion TCGA_RNA-Seq DENND5A-PGPEP1L DENND5A chr11 9286508 - PGPEP1L chr15 99541392 - Exonic hg19 BRCA TCGA-A8-A08G-01A 3 8 CDS-5'UTR Inter-chr p15.4 q26.3 Seq+ 23654 ChimerSeq STARFusion TCGA_RNA-Seq DENND5A-PGPEP1L DENND5A chr11 9286508 - PGPEP1L chr15 99514387 - Exonic hg19 BRCA TCGA-A8-A08G-01A 3 8 Out-of-frame Inter-chr p15.4 q26.3 Seq+ 23655 ChimerSeq STARFusion TCGA_RNA-Seq DENND5A-LOC338651 DENND5A chr11 9199679 - LOC338651 chr11 1618478 + Exonic hg19 BRCA TCGA-A8-A08G-01A 2 11 CDS-5'UTR Intra-chr p15.4 23656 ChimerSeq STARFusion TCGA_RNA-Seq NAA10-PRDX1 NAA10 chrX 153199914 - PRDX1 chr1 45976957 - Exonic hg19 BRCA TCGA-A8-A08G-01A 3 1 Out-of-frame Inter-chr q28 p34.1 23657 ChimerSeq STARFusion TCGA_RNA-Seq FUT10-GAB2 FUT10 chr8 33310734 - GAB2 chr11 77961446 - Exonic hg19 BRCA TCGA-AR-A250-01A 13 72 In-Frame Inter-chr p12 q14.1 Seq+ 23658 ChimerSeq STARFusion TCGA_RNA-Seq PDK2-CDK12 PDK2 chr17 48182806 + CDK12 chr17 37627132 + Exonic hg19 BRCA TCGA-AR-A250-01A 22 35 In-Frame Intra-chr q21.33 q12 Oncogene Seq+ 23659 ChimerSeq STARFusion TCGA_RNA-Seq SMURF2-NGFR SMURF2 chr17 62657947 - NGFR chr17 47579425 + Exonic hg19 BRCA TCGA-AR-A250-01A 15 17 Out-of-frame Intra-chr q24.1 q21.33 Tumor suppressor gene Seq+ 23660 ChimerSeq STARFusion TCGA_RNA-Seq CEP95-RBM11 CEP95 chr17 62503234 + RBM11 chr21 15593418 + Exonic hg19 BRCA TCGA-AR-A250-01A 9 34 In-Frame Inter-chr q23.3 q11.2 Seq+ 23661 ChimerSeq STARFusion TCGA_RNA-Seq SMURF2-IKZF3 SMURF2 chr17 62657947 - IKZF3 chr17 37949186 - Exonic hg19 BRCA TCGA-AR-A250-01A 15 9 In-Frame Intra-chr q24.1 q21.1 Tumor suppressor gene Transcription factor Seq+ 23662 ChimerSeq STARFusion TCGA_RNA-Seq UBL3-PAN3 UBL3 chr13 30423649 - PAN3 chr13 28748409 + Exonic hg19 BRCA TCGA-AR-A250-01A 12 9 Out-of-frame Intra-chr q12.3 q12.2 Seq+ 23663 ChimerSeq STARFusion TCGA_RNA-Seq PITPNC1-MBTD1 PITPNC1 chr17 65574373 + MBTD1 chr17 49302570 - Exonic hg19 BRCA TCGA-AR-A250-01A 8 12 CDS-5'UTR Intra-chr q24.2 q21.33 Seq+ 23664 ChimerSeq STARFusion TCGA_RNA-Seq PSPC1-LINC00572 PSPC1 chr13 20325411 - LINC00572 chr13 30493209 - Exonic hg19 BRCA TCGA-AR-A250-01A 9 4 Out-of-frame Intra-chr q12.11 q12.3 23665 ChimerSeq STARFusion TCGA_RNA-Seq DDX5-ADAM18 DDX5 chr17 62498128 - ADAM18 chr8 39495984 + Exonic hg19 BRCA TCGA-AR-A250-01A 2 28 Out-of-frame Inter-chr q23.3 Seq+ 23666 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-KAT7 BCAS3 chr17 59161925 + KAT7 chr17 47893165 + Exonic hg19 BRCA TCGA-AR-A250-01A 4 15 Out-of-frame Intra-chr q23.2 q21.33 Transcription factor Seq+ 23667 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A1-LINC00426 SLC7A1 chr13 30169553 - LINC00426 chr13 30973564 - Exonic hg19 BRCA TCGA-AR-A250-01A 3 12 5'UTR-5'UTR Intra-chr q12.3 q12.3 23668 ChimerSeq STARFusion TCGA_RNA-Seq STAU1-MRPL4 STAU1 chr20 47790732 - MRPL4 chr19 10363073 + Exonic hg19 BRCA TCGA-AR-A1AO-01A 19 100 5'UTR-CDS Inter-chr q13.13 p13.2 Seq+ 23669 ChimerSeq STARFusion TCGA_RNA-Seq STAU1-MRPL4 STAU1 chr20 47790732 - MRPL4 chr19 10362822 + Exonic hg19 BRCA TCGA-AR-A1AO-01A 2 100 5'UTR-5'UTR Inter-chr q13.13 p13.2 Seq+ 23670 ChimerSeq STARFusion TCGA_RNA-Seq EHBP1-COMMD1 EHBP1 chr2 62998527 + COMMD1 chr2 62362966 + Exonic hg19 BRCA TCGA-AR-A1AO-01A 15 37 In-Frame Intra-chr p15 p15 Seq+ 23671 ChimerSeq STARFusion TCGA_RNA-Seq MET-DYNC1I1 MET chr7 116371913 + DYNC1I1 chr7 95434033 + Exonic hg19 BRCA TCGA-AR-A1AO-01A 6 7 CDS-5'UTR Intra-chr q31.2 TK:Met Oncogene q21.3 Seq+ 23672 ChimerSeq STARFusion TCGA_RNA-Seq NPLOC4-NOTUM NPLOC4 chr17 79603942 - NOTUM chr17 79912179 - Exonic hg19 BRCA TCGA-AR-A1AO-01A 7 3 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 23673 ChimerSeq STARFusion TCGA_RNA-Seq WBP1L-ARL3 WBP1L chr10 104503900 + ARL3 chr10 104465246 - Exonic hg19 BRCA TCGA-AR-A1AO-01A 5 9 In-Frame Intra-chr q24.32 q24.32 Seq+ 23674 ChimerSeq STARFusion TCGA_RNA-Seq PAXBP1-TP53I3 PAXBP1 chr21 34131391 - TP53I3 chr2 24300631 - Exonic hg19 BRCA TCGA-AR-A1AO-01A 2 4 Out-of-frame Inter-chr p23.3 Seq+ 23675 ChimerSeq STARFusion TCGA_RNA-Seq ZNF594-SCIMP ZNF594 chr17 5095043 - SCIMP chr17 5114250 - Exonic hg19 BRCA TCGA-AR-A1AO-01A 2 3 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.2 23676 ChimerSeq STARFusion TCGA_RNA-Seq SKAP2-KIAA1244 SKAP2 chr7 26883649 - KIAA1244 chr6 138491799 + Exonic hg19 BRCA TCGA-AR-A1AO-01A 2 1 In-Frame Inter-chr p15.2 23677 ChimerSeq STARFusion TCGA_RNA-Seq WDR76-PDIA3 WDR76 chr15 44128414 + PDIA3 chr15 44053622 + Exonic hg19 BRCA TCGA-AR-A1AO-01A 2 1 Out-of-frame Intra-chr q15.3 q15.3 Seq+ 23678 ChimerSeq STARFusion TCGA_RNA-Seq NME7-FAM129A NME7 chr1 169336946 - FAM129A chr1 184801096 - Exonic hg19 BRCA TCGA-AR-A1AO-01A 2 0 Out-of-frame Intra-chr q24.2 q25.3 23679 ChimerSeq STARFusion TCGA_RNA-Seq PTPN2-NPIPB1P PTPN2 chr18 12859163 - NPIPB1P chr18 11621475 - Exonic hg19 BRCA TCGA-AN-A0XO-01A 2 12 Out-of-frame Intra-chr p11.21 Tumor suppressor gene p11.21 23680 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL1A-LETM2 OSBPL1A chr18 21977619 - LETM2 chr8 38257790 + Exonic hg19 BRCA TCGA-AN-A0XO-01A 2 11 5'UTR-CDS Inter-chr q11.2 p11.23 Seq+ 23681 ChimerSeq STARFusion TCGA_RNA-Seq PABPC1-RLIM PABPC1 chr8 101717154 - RLIM chrX 73803072 - Exonic hg19 BRCA TCGA-B6-A0IE-01A 3 24 CDS-3'UTR Inter-chr q22.3 q13.2 23682 ChimerSeq STARFusion TCGA_RNA-Seq CLTB-SIL1 CLTB chr5 175837258 - SIL1 chr5 138287573 - Exonic hg19 BRCA TCGA-B6-A0IE-01A 3 14 Out-of-frame Intra-chr q35.2 q31.2 Seq+ 23683 ChimerSeq STARFusion TCGA_RNA-Seq BTNL9-KLC1 BTNL9 chr5 180477369 + KLC1 chr14 104166992 + Exonic hg19 BRCA TCGA-B6-A0IE-01A 2 0 Out-of-frame Inter-chr q35.3 q32.33 23684 ChimerSeq STARFusion TCGA_RNA-Seq ATE1-ZRANB1 ATE1 chr10 123681864 - ZRANB1 chr10 126670278 + Exonic hg19 BRCA TCGA-E9-A229-01A 27 42 In-Frame Intra-chr q26.13 q26.13 Seq+ 23685 ChimerSeq STARFusion TCGA_RNA-Seq DLG5-PCDH15 DLG5 chr10 79685975 - PCDH15 chr10 56287637 - Exonic hg19 BRCA TCGA-E9-A229-01A 2 15 In-Frame Intra-chr q22.3 q21.1 Seq+ 23686 ChimerSeq STARFusion TCGA_RNA-Seq DLG5-PCDH15 DLG5 chr10 79685975 - PCDH15 chr10 56138702 - Exonic hg19 BRCA TCGA-E9-A229-01A 2 15 In-Frame Intra-chr q22.3 q21.1 Seq+ 23687 ChimerSeq STARFusion TCGA_RNA-Seq GPR157-GON4L GPR157 chr1 9188704 - GON4L chr1 155755165 - Exonic hg19 BRCA TCGA-E9-A229-01A 3 6 Out-of-frame Intra-chr p36.22 q22 Seq+ 23688 ChimerSeq STARFusion TCGA_RNA-Seq PDSS2-LMBRD1 PDSS2 chr6 107595233 - LMBRD1 chr6 70428973 - Exonic hg19 BRCA TCGA-E9-A229-01A 2 2 In-Frame Intra-chr q21 Tumor suppressor gene q13 Seq+ 23689 ChimerSeq STARFusion TCGA_RNA-Seq GLTSCR2-LOC440311 GLTSCR2 chr19 48259068 + LOC440311 chr15 95399936 + Exonic hg19 BRCA TCGA-OL-A66L-01A 3 70 Out-of-frame Inter-chr Tumor suppressor gene 23690 ChimerSeq STARFusion TCGA_RNA-Seq AMFR-ST7L AMFR chr16 56419831 - ST7L chr1 113153625 - Exonic hg19 BRCA TCGA-OL-A66L-01A 2 1 5'UTR-CDS Inter-chr q13 p13.2 23691 ChimerSeq STARFusion TCGA_RNA-Seq PDHX-CAT PDHX chr11 34999729 + CAT chr11 34477558 + Exonic hg19 BRCA TCGA-E9-A1RB-01A 10 52 In-Frame Intra-chr p13 p13 Tumor suppressor gene Seq+ 23692 ChimerSeq STARFusion TCGA_RNA-Seq FOXP1-EIF4E3 FOXP1 chr3 71630700 - EIF4E3 chr3 71759635 - Exonic hg19 BRCA TCGA-E9-A1RB-01A 10 18 5'UTR-5'UTR Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor p13 Seq+ 23693 ChimerSeq STARFusion TCGA_RNA-Seq ASCC1-MICU1 ASCC1 chr10 73956569 - MICU1 chr10 74167795 - Exonic hg19 BRCA TCGA-E9-A1RB-01A 8 21 In-Frame Intra-chr q22.1 q22.1 Seq+ 23694 ChimerSeq STARFusion TCGA_RNA-Seq TACC2-LOC100507412 TACC2 chr10 123810065 + LOC100507412 chrUn_gl000220 122539 + Exonic hg19 BRCA TCGA-E9-A1RB-01A 8 17 CDS-5'UTR Inter-chr q26.13 23695 ChimerSeq STARFusion TCGA_RNA-Seq MAST2-MMEL1 MAST2 chr1 46493535 + MMEL1 chr1 2543643 - Exonic hg19 BRCA TCGA-E9-A1RB-01A 2 8 Out-of-frame Intra-chr p34.1 AGC:MAST Seq+ 23696 ChimerSeq STARFusion TCGA_RNA-Seq LINC00536-TRPS1 LINC00536 chr8 117142423 - TRPS1 chr8 116632287 - Exonic hg19 BRCA TCGA-E9-A1RB-01A 2 1 3'UTR-CDS Intra-chr q23.3 q23.3 Transcription factor 23697 ChimerSeq STARFusion TCGA_RNA-Seq ATP2C1-FCGBP ATP2C1 chr3 130678185 + FCGBP chr19 40374086 - Exonic hg19 BRCA TCGA-BH-A0HW-01A 4 15 Out-of-frame Inter-chr q22.1 Seq+ 23698 ChimerSeq STARFusion TCGA_RNA-Seq TIMM23B-LINC00843 TIMM23B chr10 51387763 + LINC00843 chr10 51732772 + Exonic hg19 BRCA TCGA-E2-A1B1-01A 17 66 Out-of-frame Intra-chr q11.23 q11.23 23699 ChimerSeq STARFusion TCGA_RNA-Seq EEF1A1-COL3A1 EEF1A1 chr6 74228077 - COL3A1 chr2 189872852 + Exonic hg19 BRCA TCGA-E2-A1B1-01A 3 23 In-Frame Inter-chr q13 Tumor suppressor gene q32.2 23700 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN9-PRR4 TSPAN9 chr12 3192885 + PRR4 chr12 11036874 - Exonic hg19 BRCA TCGA-A8-A09T-01A 4 59 5'UTR-5'UTR Intra-chr p13.33 Seq+ 23701 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN9-PRR4 TSPAN9 chr12 3192885 + PRR4 chr12 11001006 - Exonic hg19 BRCA TCGA-A8-A09T-01A 2 52 5'UTR-CDS Intra-chr p13.33 Seq+ 23702 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN9-PRH1 TSPAN9 chr12 3192885 + PRH1 chr12 11036874 - Exonic hg19 BRCA TCGA-A8-A09T-01A 4 43 5'UTR-5'UTR Intra-chr p13.33 Seq+ 23703 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010681 - TTC18 chr10 75016173 - Exonic hg19 BRCA TCGA-A8-A07W-01A 66 172 Out-of-frame Intra-chr q22.2 23704 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010573 - TTC18 chr10 75016174 - Exonic hg19 BRCA TCGA-A8-A07W-01A 33 172 3'UTR-CDS Intra-chr q22.2 23705 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010596 - TTC18 chr10 75016174 - Exonic hg19 BRCA TCGA-A8-A07W-01A 14 172 3'UTR-CDS Intra-chr q22.2 23706 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75011521 - TTC18 chr10 75016174 - Exonic hg19 BRCA TCGA-A8-A07W-01A 10 172 Out-of-frame Intra-chr q22.2 23707 ChimerSeq STARFusion TCGA_RNA-Seq PRPF19-DDB1 PRPF19 chr11 60668054 - DDB1 chr11 61091609 - Exonic hg19 BRCA TCGA-A8-A07W-01A 21 75 In-Frame Intra-chr q12.2 q12.2 Seq+ 23708 ChimerSeq STARFusion TCGA_RNA-Seq SHANK2-CPT1A SHANK2 chr11 70935743 - CPT1A chr11 68582955 - Exonic hg19 BRCA TCGA-A8-A07W-01A 28 45 5'UTR-5'UTR Intra-chr q13.4 q13.3 Seq+ 23709 ChimerSeq STARFusion TCGA_RNA-Seq BCAS4-PTPN1 BCAS4 chr20 49458437 + PTPN1 chr20 49194957 + Exonic hg19 BRCA TCGA-A8-A07W-01A 23 58 In-Frame Intra-chr q13.13 q13.13 Tumor suppressor gene Seq+ 23710 ChimerSeq STARFusion TCGA_RNA-Seq RABEP1-RORB RABEP1 chr17 5250220 + RORB chr9 77245198 + Exonic hg19 BRCA TCGA-A8-A07W-01A 11 14 In-Frame Inter-chr p13.2 q21.13 Transcription factor Seq+ 23711 ChimerSeq STARFusion TCGA_RNA-Seq SH3GL1-TAX1BP1 SH3GL1 chr19 4400321 - TAX1BP1 chr7 27867357 + Exonic hg19 BRCA TCGA-A8-A07W-01A 4 32 In-Frame Inter-chr p13.3 p15.2 Seq+ 23712 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA5-ST8SIA1 PLEKHA5 chr12 19285384 + ST8SIA1 chr12 22440227 - Exonic hg19 BRCA TCGA-A8-A07W-01A 4 8 In-Frame Intra-chr p12.3 p12.1 Seq+ 23713 ChimerSeq STARFusion TCGA_RNA-Seq RFWD2-XPR1 RFWD2 chr1 176175708 - XPR1 chr1 180849212 + Exonic hg19 BRCA TCGA-A8-A07W-01A 4 3 In-Frame Intra-chr q25.2 Tumor suppressor gene q25.3 Seq+ 23714 ChimerSeq STARFusion TCGA_RNA-Seq EAF1-BTD EAF1 chr3 15469389 + BTD chr3 15676931 + Exonic hg19 BRCA TCGA-A8-A07W-01A 2 10 Out-of-frame Intra-chr p25.1 Tumor suppressor gene p25.1 Seq+ 23715 ChimerSeq STARFusion TCGA_RNA-Seq KIF16B-HIPK3 KIF16B chr20 16488603 - HIPK3 chr11 33368839 + Exonic hg19 BRCA TCGA-A8-A07W-01A 2 4 Out-of-frame Inter-chr p12.1 p13 CMGC:DYRK Seq+ 23716 ChimerSeq STARFusion TCGA_RNA-Seq LOC283788-LINC00639 LOC283788 chrUn_gl000219 97294 - LINC00639 chr14 39360002 - Exonic hg19 BRCA TCGA-A8-A07W-01A 2 0 Out-of-frame Inter-chr q21.1 23717 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-MAP3K3 KDM2A chr11 66999431 + MAP3K3 chr17 61759126 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 121 456 Out-of-frame Inter-chr q13.2 Transcription factor q23.3 STE:STE11 Seq+ 23718 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-STRADA TANC2 chr17 61086987 + STRADA chr17 61805773 - Exonic hg19 BRCA TCGA-A1-A0SN-01A 119 256 CDS-5'UTR Intra-chr q23.2 q23.3 Tumor suppressor gene Seq+ 23719 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-MAP3K3 KDM2A chr11 66999300 + MAP3K3 chr17 61759128 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 17 456 Out-of-frame Inter-chr q13.2 Transcription factor q23.3 STE:STE11 Seq+ 23720 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-TEX2 RPS6KB1 chr17 57990165 + TEX2 chr17 62291602 - Exonic hg19 BRCA TCGA-A1-A0SN-01A 43 140 CDS-5'UTR Intra-chr q23.1 Oncogene q23.3 Seq+ 23721 ChimerSeq STARFusion TCGA_RNA-Seq TUBD1-CDK12 TUBD1 chr17 57943970 - CDK12 chr17 37667782 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 15 174 Out-of-frame Intra-chr q23.1 q12 Oncogene Seq+ 23722 ChimerSeq STARFusion TCGA_RNA-Seq DDX42-RPS6KB1 DDX42 chr17 61882535 + RPS6KB1 chr17 57987923 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 35 86 In-Frame Intra-chr q23.3 q23.1 Oncogene Seq+ 23723 ChimerSeq STARFusion TCGA_RNA-Seq TUBD1-CDK12 TUBD1 chr17 57951900 - CDK12 chr17 37667782 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 12 174 Out-of-frame Intra-chr q23.1 q12 Oncogene Seq+ 23724 ChimerSeq STARFusion TCGA_RNA-Seq TUBD1-CDK12 TUBD1 chr17 57955464 - CDK12 chr17 37667782 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 6 174 Out-of-frame Intra-chr q23.1 q12 Oncogene Seq+ 23725 ChimerSeq STARFusion TCGA_RNA-Seq PSMD3-C11orf80 PSMD3 chr17 38137443 + C11orf80 chr11 66526514 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 19 117 In-Frame Inter-chr q21.1 q13.2 Seq+ 23726 ChimerSeq STARFusion TCGA_RNA-Seq MED13-KCNJ2 MED13 chr17 60142501 - KCNJ2 chr17 68170965 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 25 63 CDS-5'UTR Intra-chr q23.2 q24.3 Seq+ 23727 ChimerSeq STARFusion TCGA_RNA-Seq PSMD3-C11orf80 PSMD3 chr17 38137443 + C11orf80 chr11 66523824 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 6 117 In-Frame Inter-chr q21.1 q13.2 Seq+ 23728 ChimerSeq STARFusion TCGA_RNA-Seq CADPS2-LMOD2 CADPS2 chr7 122526053 - LMOD2 chr7 123301914 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 23 34 In-Frame Intra-chr q31.32 q31.32 Seq+ 23729 ChimerSeq STARFusion TCGA_RNA-Seq TLK2-KCNJ16 TLK2 chr17 60558567 + KCNJ16 chr17 68096799 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 5 77 CDS-5'UTR Intra-chr q23.2 Other:TLK q24.3 Seq+ 23730 ChimerSeq STARFusion TCGA_RNA-Seq USP32-CLTC USP32 chr17 58282808 - CLTC chr17 57728564 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 17 29 In-Frame Intra-chr q23.2 q23.1 23731 ChimerSeq STARFusion TCGA_RNA-Seq USP6-CLTC USP6 chr17 5052062 + CLTC chr17 57728564 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 16 32 In-Frame Intra-chr p13.2 q23.1 Seq+ 23732 ChimerSeq STARFusion TCGA_RNA-Seq RHOD-PFDN4 RHOD chr11 66834318 + PFDN4 chr20 52830890 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 13 32 In-Frame Inter-chr q13.2 q13.2 Seq+ 23733 ChimerSeq STARFusion TCGA_RNA-Seq SND1-GRM8 SND1 chr7 127361454 + GRM8 chr7 126544737 - Exonic hg19 BRCA TCGA-A1-A0SN-01A 9 24 Out-of-frame Intra-chr q32.1 q31.33 Oncogene Seq+ 23734 ChimerSeq STARFusion TCGA_RNA-Seq APPBP2-HEATR6 APPBP2 chr17 58529241 - HEATR6 chr17 58134764 - Exonic hg19 BRCA TCGA-A1-A0SN-01A 7 19 In-Frame Intra-chr q23.2 q23.1 Seq+ 23735 ChimerSeq STARFusion TCGA_RNA-Seq RHOD-PFDN4 RHOD chr11 66824505 + PFDN4 chr20 52830890 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 3 32 In-Frame Inter-chr q13.2 q13.2 Seq+ 23736 ChimerSeq STARFusion TCGA_RNA-Seq VMP1-KDM2A VMP1 chr17 57851246 + KDM2A chr11 66947550 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 5 2 In-Frame Inter-chr q23.1 q13.2 Transcription factor Seq+ 23737 ChimerSeq STARFusion TCGA_RNA-Seq RABEP1-LOC100130950 RABEP1 chr17 5185815 + LOC100130950 chr17 5113045 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 2 12 CDS-5'UTR Intra-chr p13.2 23738 ChimerSeq STARFusion TCGA_RNA-Seq CABLES1-RBBP8 CABLES1 chr18 20716571 + RBBP8 chr18 20569184 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 4 3 Out-of-frame Intra-chr q11.2 Tumor suppressor gene q11.2 Tumor suppressor gene Seq+ 23739 ChimerSeq STARFusion TCGA_RNA-Seq LOC100271836-IGSF6 LOC100271836 chr16 21489412 - IGSF6 chr16 21658813 - Exonic hg19 BRCA TCGA-A1-A0SN-01A 4 3 Out-of-frame Intra-chr 23740 ChimerSeq STARFusion TCGA_RNA-Seq RBM4-MTMR4 RBM4 chr11 66407594 + MTMR4 chr17 56573691 - Exonic hg19 BRCA TCGA-A1-A0SN-01A 3 6 Out-of-frame Inter-chr q13.2 Tumor suppressor gene q22 Seq+ 23741 ChimerSeq STARFusion TCGA_RNA-Seq PPM1D-BCAS3 PPM1D chr17 58725443 + BCAS3 chr17 59024580 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 3 4 Out-of-frame Intra-chr q23.2 q23.2 23742 ChimerSeq STARFusion TCGA_RNA-Seq TRRAP-PRKAR2B TRRAP chr7 98515302 + PRKAR2B chr7 106762397 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 2 8 Out-of-frame Intra-chr q22.1 Atypical:PIKK Oncogene Seq+ 23743 ChimerSeq STARFusion TCGA_RNA-Seq INTS2-AXIN2 INTS2 chr17 59989301 - AXIN2 chr17 63554854 - Exonic hg19 BRCA TCGA-A1-A0SN-01A 2 3 CDS-5'UTR Intra-chr q23.2 q24.1 Tumor suppressor gene Seq+ 23744 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-AGO2 PTK2 chr8 142011224 - AGO2 chr8 141595410 - Exonic hg19 BRCA TCGA-A1-A0SN-01A 2 2 Out-of-frame Intra-chr q24.3 q24.3 23745 ChimerSeq STARFusion TCGA_RNA-Seq STRADA-SEPT4 STRADA chr17 61790766 - SEPT4 chr17 56604339 - Exonic hg19 BRCA TCGA-A1-A0SN-01A 2 2 In-Frame Intra-chr q23.3 Tumor suppressor gene q22 Tumor suppressor gene 23746 ChimerSeq STARFusion TCGA_RNA-Seq TBX4-MED13 TBX4 chr17 59534992 + MED13 chr17 60028359 - Exonic hg19 BRCA TCGA-A1-A0SN-01A 2 2 Out-of-frame Intra-chr q23.2 Transcription factor q23.2 23747 ChimerSeq STARFusion TCGA_RNA-Seq PRKAR2B-RELN PRKAR2B chr7 106710761 + RELN chr7 103393661 - Exonic hg19 BRCA TCGA-A1-A0SN-01A 2 0 In-Frame Intra-chr q22.1 23748 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-CCDC170 ESR1 chr6 152011799 + CCDC170 chr6 151936578 + Exonic hg19 BRCA TCGA-D8-A1JP-01A 13 27 5'UTR-CDS Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 KB Pub Seq+ 23749 ChimerSeq STARFusion TCGA_RNA-Seq TATDN1-OC90 TATDN1 chr8 125527987 - OC90 chr8 133058130 - Exonic hg19 BRCA TCGA-D8-A1JP-01A 7 10 Out-of-frame Intra-chr q24.13 q24.22 Seq+ 23750 ChimerSeq STARFusion TCGA_RNA-Seq TATDN1-OC90 TATDN1 chr8 125527987 - OC90 chr8 133058130 - Exonic hg19 BRCA TCGA-D8-A1JP-01A 6 9 Out-of-frame Intra-chr q24.13 q24.22 Seq+ 23751 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-TRAPPC9 AGO2 chr8 141645584 - TRAPPC9 chr8 141381279 - Exonic hg19 BRCA TCGA-D8-A1JP-01A 4 11 Out-of-frame Intra-chr q24.3 q24.3 23752 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1033-AUTS2 KIAA1033 chr12 105501639 + AUTS2 chr7 69583118 + Exonic hg19 BRCA TCGA-D8-A1JP-01A 2 4 Out-of-frame Inter-chr q11.22 Seq+ 23753 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-PLD3 RNA45S5 chrUn_gl000220 118058 + PLD3 chr19 40854509 + Exonic hg19 BRCA TCGA-OL-A5RU-01A 3 1 Out-of-frame Inter-chr q13.2 23754 ChimerSeq STARFusion TCGA_RNA-Seq MTHFD1L-RGS17 MTHFD1L chr6 151209117 + RGS17 chr6 153365178 - Exonic hg19 BRCA TCGA-A2-A0CY-01A 33 81 CDS-5'UTR Intra-chr q25.1 q25.2 Seq+ 23755 ChimerSeq STARFusion TCGA_RNA-Seq EZR-RB1CC1 EZR chr6 159206341 - RB1CC1 chr8 53537347 - Exonic hg19 BRCA TCGA-A2-A0CY-01A 25 48 Out-of-frame Inter-chr q25.3 q11.23 Tumor suppressor gene Seq+ 23756 ChimerSeq STARFusion TCGA_RNA-Seq MARCH2-TNNT3 2019_ 3_ 2_ chr19 8503552 + TNNT3 chr11 1949979 + Exonic hg19 BRCA TCGA-A2-A0CY-01A 15 38 Out-of-frame Inter-chr p13.2 p15.5 Seq+ 23757 ChimerSeq STARFusion TCGA_RNA-Seq FAM168A-RAB6A FAM168A chr11 73179450 - RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-A2-A0CY-01A 5 16 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 23758 ChimerSeq STARFusion TCGA_RNA-Seq RLF-SFPQ RLF chr1 40627308 + SFPQ chr1 35657130 - Exonic hg19 BRCA TCGA-A2-A0CY-01A 2 19 In-Frame Intra-chr p34.2 Transcription factor p34.3 Seq+ 23759 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-SPARCL1 PTPRK chr6 128505577 - SPARCL1 chr4 88420737 - Exonic hg19 BRCA TCGA-A2-A0CY-01A 2 13 CDS-5'UTR Inter-chr Tumor suppressor gene q22.1 Tumor suppressor gene Seq+ 23760 ChimerSeq STARFusion TCGA_RNA-Seq SEPT11-SHROOM3 SEPT11 chr4 77871083 + SHROOM3 chr4 77691779 + Exonic hg19 BRCA TCGA-A2-A0CY-01A 2 5 In-Frame Intra-chr q21.1 q21.1 23761 ChimerSeq STARFusion TCGA_RNA-Seq ACLY-DNAJC7 ACLY chr17 40057949 - DNAJC7 chr17 40129341 - Exonic hg19 BRCA TCGA-LL-A6FR-01A 147 483 In-Frame Intra-chr q21.2 q21.2 Seq+ 23762 ChimerSeq STARFusion TCGA_RNA-Seq ACTG1-LOC644961 ACTG1 chr17 79477225 - LOC644961 chr1 27652670 + Exonic hg19 BRCA TCGA-LL-A6FR-01A 3 6 Out-of-frame Inter-chr q25.3 23763 ChimerSeq STARFusion TCGA_RNA-Seq RPL38-KIF19 RPL38 chr17 72200329 + KIF19 chr17 72324564 + Exonic hg19 BRCA TCGA-LL-A6FR-01A 3 3 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 23764 ChimerSeq STARFusion TCGA_RNA-Seq KIF5B-HPS4 KIF5B chr10 32337392 - HPS4 chr22 26860792 - Exonic hg19 BRCA TCGA-BH-A0B7-01A 34 125 Out-of-frame Inter-chr p11.22 q12.1 Seq+ 23765 ChimerSeq STARFusion TCGA_RNA-Seq ANKLE2-NHP2L1 ANKLE2 chr12 133324418 - NHP2L1 chr22 42076368 - Exonic hg19 BRCA TCGA-BH-A0B7-01A 32 102 In-Frame Inter-chr q24.33 Seq+ 23766 ChimerSeq STARFusion TCGA_RNA-Seq MTSS1-ST3GAL1 MTSS1 chr8 125740125 - ST3GAL1 chr8 134478333 - Exonic hg19 BRCA TCGA-BH-A0B7-01A 23 73 In-Frame Intra-chr q24.13 Tumor suppressor gene q24.22 Seq+ 23767 ChimerSeq STARFusion TCGA_RNA-Seq GTF2F2-NBEA GTF2F2 chr13 45781640 + NBEA chr13 35923245 + Exonic hg19 BRCA TCGA-BH-A0B7-01A 11 18 In-Frame Intra-chr q14.12 q13.3 Seq+ 23768 ChimerSeq STARFusion TCGA_RNA-Seq SCYL1-FRMD8 SCYL1 chr11 65294588 + FRMD8 chr11 65172335 + Exonic hg19 BRCA TCGA-BH-A0B7-01A 3 37 In-Frame Intra-chr q13.1 Other:SCY1 Tumor suppressor gene q13.1 Seq+ 23769 ChimerSeq STARFusion TCGA_RNA-Seq CACNB1-LASP1 CACNB1 chr17 37351137 - LASP1 chr17 37054665 + Exonic hg19 BRCA TCGA-BH-A0B7-01A 3 25 In-Frame Intra-chr q12 q12 Seq+ 23770 ChimerSeq STARFusion TCGA_RNA-Seq MZT1-TERF1 MZT1 chr13 73293090 - TERF1 chr8 73939175 + Exonic hg19 BRCA TCGA-BH-A0B7-01A 6 9 In-Frame Inter-chr q21.33 q21.11 Transcription factor Seq+ 23771 ChimerSeq STARFusion TCGA_RNA-Seq PIP4K2B-TMEM132E PIP4K2B chr17 36955519 - TMEM132E chr17 32953146 + Exonic hg19 BRCA TCGA-BH-A0B7-01A 4 14 Out-of-frame Intra-chr q12 q12 Seq+ 23772 ChimerSeq STARFusion TCGA_RNA-Seq EEA1-PAH EEA1 chr12 93258636 - PAH chr12 103249110 - Exonic hg19 BRCA TCGA-BH-A0B7-01A 4 10 In-Frame Intra-chr q22 Transcription factor q23.2 Seq+ 23773 ChimerSeq STARFusion TCGA_RNA-Seq RPL19-CCL11 RPL19 chr17 37356602 + CCL11 chr17 32614115 + Exonic hg19 BRCA TCGA-BH-A0B7-01A 2 17 Out-of-frame Intra-chr q12 q12 Seq+ 23774 ChimerSeq STARFusion TCGA_RNA-Seq TMEM132E-GPATCH8 TMEM132E chr17 32908162 + GPATCH8 chr17 42501860 - Exonic hg19 BRCA TCGA-BH-A0B7-01A 2 15 Out-of-frame Intra-chr q12 q21.31 Seq+ 23775 ChimerSeq STARFusion TCGA_RNA-Seq MED24-SLC4A1 MED24 chr17 38179384 - SLC4A1 chr17 42328700 - Exonic hg19 BRCA TCGA-BH-A0B7-01A 3 10 In-Frame Intra-chr q21.1 q21.31 Seq+ 23776 ChimerSeq STARFusion TCGA_RNA-Seq UBTF-CACNB1 UBTF chr17 42298108 - CACNB1 chr17 37351223 - Exonic hg19 BRCA TCGA-BH-A0B7-01A 4 5 5'UTR-CDS Intra-chr q21.31 q12 Seq+ 23777 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP21-ASPHD2 ARHGAP21 chr10 24883879 - ASPHD2 chr22 26838425 + Exonic hg19 BRCA TCGA-BH-A0B7-01A 3 7 Out-of-frame Inter-chr p12.1 q12.1 Seq+ 23778 ChimerSeq STARFusion TCGA_RNA-Seq PGAP3-IKZF3 PGAP3 chr17 37840850 - IKZF3 chr17 37988404 - Exonic hg19 BRCA TCGA-BH-A0B7-01A 2 7 Out-of-frame Intra-chr q12 Oncogene q21.1 Tumor suppressor gene Transcription factor Seq+ 23779 ChimerSeq STARFusion TCGA_RNA-Seq GNAI3-SARS GNAI3 chr1 110091460 + SARS chr1 109766600 + Exonic hg19 BRCA TCGA-E2-A14P-01A 55 260 In-Frame Intra-chr p13.3 p13.3 Seq+ 23780 ChimerSeq STARFusion TCGA_RNA-Seq FRG1B-PPP1R1B FRG1B chr20 29625984 + PPP1R1B chr17 37786225 + Exonic hg19 BRCA TCGA-E2-A14P-01A 19 82 5'UTR-CDS Inter-chr q12 Tumor suppressor gene 23781 ChimerSeq STARFusion TCGA_RNA-Seq PIGL-TBC1D26 PIGL chr17 16137384 + TBC1D26 chr17 15643414 + Exonic hg19 BRCA TCGA-E2-A14P-01A 12 58 In-Frame Intra-chr p11.2 p12 Seq+ 23782 ChimerSeq STARFusion TCGA_RNA-Seq PIGL-ZNF286A PIGL chr17 16137384 + ZNF286A chr17 15643414 + Exonic hg19 BRCA TCGA-E2-A14P-01A 12 58 CDS-3'UTR Intra-chr p11.2 p12 Transcription factor 23783 ChimerSeq STARFusion TCGA_RNA-Seq FRG1B-PPP1R1B FRG1B chr20 29625984 + PPP1R1B chr17 37790136 + Exonic hg19 BRCA TCGA-E2-A14P-01A 3 78 5'UTR-CDS Inter-chr q12 Tumor suppressor gene 23784 ChimerSeq STARFusion TCGA_RNA-Seq GSK3B-FSTL1 GSK3B chr3 119720893 - FSTL1 chr3 120134874 - Exonic hg19 BRCA TCGA-E2-A14P-01A 7 44 In-Frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q13.33 Seq+ 23785 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1E-DNAL4 CSNK1E chr22 38757404 - DNAL4 chr22 39178875 - Exonic hg19 BRCA TCGA-E2-A14P-01A 5 48 5'UTR-5'UTR Intra-chr q13.1 q13.1 Seq+ 23786 ChimerSeq STARFusion TCGA_RNA-Seq CELSR1-CERK CELSR1 chr22 46929524 - CERK chr22 47083103 - Exonic hg19 BRCA TCGA-E2-A14P-01A 3 50 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 23787 ChimerSeq STARFusion TCGA_RNA-Seq CELSR1-CERK CELSR1 chr22 46929524 - CERK chr22 47086097 - Exonic hg19 BRCA TCGA-E2-A14P-01A 3 50 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 23788 ChimerSeq STARFusion TCGA_RNA-Seq GSK3B-FSTL1 GSK3B chr3 119720893 - FSTL1 chr3 120169593 - Exonic hg19 BRCA TCGA-E2-A14P-01A 3 44 CDS-5'UTR Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q13.33 Seq+ 23789 ChimerSeq STARFusion TCGA_RNA-Seq MED24-IKZF3 MED24 chr17 38176526 - IKZF3 chr17 37949186 - Exonic hg19 BRCA TCGA-E2-A14P-01A 5 23 In-Frame Intra-chr q21.1 q21.1 Tumor suppressor gene Transcription factor Seq+ 23790 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF34P-COA1 ARHGEF34P chr7 143991211 - COA1 chr7 43688251 - Exonic hg19 BRCA TCGA-E2-A14P-01A 6 18 Out-of-frame Intra-chr q35 p13 23791 ChimerSeq STARFusion TCGA_RNA-Seq CDC42EP2-CAPN1 CDC42EP2 chr11 65082425 + CAPN1 chr11 64972154 + Exonic hg19 BRCA TCGA-E2-A14P-01A 4 19 5'UTR-5'UTR Intra-chr q13.1 q13.1 Seq+ 23792 ChimerSeq STARFusion TCGA_RNA-Seq WDR76-PDIA3 WDR76 chr15 44128414 + PDIA3 chr15 44046022 + Exonic hg19 BRCA TCGA-E2-A14P-01A 4 16 In-Frame Intra-chr q15.3 q15.3 Seq+ 23793 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF34P-COA1 ARHGEF34P chr7 143991211 - COA1 chr7 43705321 - Exonic hg19 BRCA TCGA-E2-A14P-01A 3 18 Out-of-frame Intra-chr q35 p13 23794 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-PIK3CA TBL1XR1 chr3 176914909 - PIK3CA chr3 178916538 + Exonic hg19 BRCA TCGA-E2-A14P-01A 5 6 5'UTR-5'UTR Intra-chr q26.32 q26.32 Oncogene Seq+ 23795 ChimerSeq STARFusion TCGA_RNA-Seq JRK-LYNX1 JRK chr8 143747046 - LYNX1 chr8 143851356 - Exonic hg19 BRCA TCGA-E2-A14P-01A 3 5 Out-of-frame Intra-chr q24.3 Transcription factor q24.3 23796 ChimerSeq STARFusion TCGA_RNA-Seq PHF12-DDX11L16 PHF12 chr17 27277083 - DDX11L16 chrY 59360115 - Exonic hg19 BRCA TCGA-E2-A14P-01A 2 8 Out-of-frame Inter-chr q11.2 q28 23797 ChimerSeq STARFusion TCGA_RNA-Seq PHF12-DDX11L16 PHF12 chr17 27277083 - DDX11L16 chrX 155257109 - Exonic hg19 BRCA TCGA-E2-A14P-01A 2 5 Out-of-frame Inter-chr q11.2 q28 23798 ChimerSeq STARFusion TCGA_RNA-Seq LOC100288778-WASH7P LOC100288778 chr12 89018 + WASH7P chr1 15953 - Exonic hg19 BRCA TCGA-LL-A5YL-01A 4 2 5'UTR-3'UTR Inter-chr p36.33 23799 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PRR11 RARA chr17 38474700 + PRR11 chr17 57247109 + Exonic hg19 BRCA TCGA-A2-A0YG-01A 1016 3420 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 23800 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PRR11 RARA chr17 38465538 + PRR11 chr17 57247109 + Exonic hg19 BRCA TCGA-A2-A0YG-01A 148 3420 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 23801 ChimerSeq STARFusion TCGA_RNA-Seq DCAF6-MPZL1 DCAF6 chr1 167906246 + MPZL1 chr1 167734820 + Exonic hg19 BRCA TCGA-A2-A0YG-01A 21 94 In-Frame Intra-chr q24.2 q24.2 KB Seq+ 23802 ChimerSeq STARFusion TCGA_RNA-Seq NOS1AP-MROH9 NOS1AP chr1 162302915 + MROH9 chr1 170983258 + Exonic hg19 BRCA TCGA-A2-A0YG-01A 10 60 Out-of-frame Intra-chr q23.3 q24.3 Seq+ 23803 ChimerSeq STARFusion TCGA_RNA-Seq UCK2-SNX27 UCK2 chr1 165797169 + SNX27 chr1 151611364 + Exonic hg19 BRCA TCGA-A2-A0YG-01A 10 21 Out-of-frame Intra-chr q24.1 q21.3 Seq+ 23804 ChimerSeq STARFusion TCGA_RNA-Seq RTN4-DTNB RTN4 chr2 55209651 - DTNB chr2 25611230 - Exonic hg19 BRCA TCGA-A2-A0YG-01A 6 21 In-Frame Intra-chr p16.1 Tumor suppressor gene p23.3 Seq+ 23805 ChimerSeq STARFusion TCGA_RNA-Seq APH1A-RGS4 APH1A chr1 150241098 - RGS4 chr1 163039042 + Exonic hg19 BRCA TCGA-A2-A0YG-01A 6 12 Out-of-frame Intra-chr q21.2 q23.3 Seq+ 23806 ChimerSeq STARFusion TCGA_RNA-Seq APH1A-RGS4 APH1A chr1 150239756 - RGS4 chr1 163039042 + Exonic hg19 BRCA TCGA-A2-A0YG-01A 6 12 In-Frame Intra-chr q21.2 q23.3 Seq+ 23807 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-LOC728730 PTPRK chr6 128718711 - LOC728730 chr2 39826506 + Exonic hg19 BRCA TCGA-A2-A0YG-01A 6 7 CDS-5'UTR Inter-chr Tumor suppressor gene 23808 ChimerSeq STARFusion TCGA_RNA-Seq PPP3R1-TTC27 PPP3R1 chr2 68479257 - TTC27 chr2 33007693 + Exonic hg19 BRCA TCGA-A2-A0YG-01A 2 10 In-Frame Intra-chr p14 p22.3 Seq+ 23809 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-CCDC170 ESR1 chr6 152023140 + CCDC170 chr6 151859180 + Exonic hg19 BRCA TCGA-A2-A0YG-01A 2 5 5'UTR-CDS Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 KB Pub Seq+ 23810 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 BRCA TCGA-E2-A2P6-01A 2 0 In-Frame Intra-chr p11.21 p11.21 23811 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D22B-YPEL1 TBC1D22B chr6 37284982 + YPEL1 chr22 22055507 - Exonic hg19 BRCA TCGA-EW-A1J2-01A 7 12 In-Frame Inter-chr p21.2 q11.22 Seq+ 23812 ChimerSeq STARFusion TCGA_RNA-Seq SUPT4H1-SEPT4 SUPT4H1 chr17 56429428 - SEPT4 chr17 56603674 - Exonic hg19 BRCA TCGA-BH-A0DX-01A 19 90 In-Frame Intra-chr q22 q22 Tumor suppressor gene Seq+ 23813 ChimerSeq STARFusion TCGA_RNA-Seq SUPT4H1-SEPT4 SUPT4H1 chr17 56429428 - SEPT4 chr17 56604339 - Exonic hg19 BRCA TCGA-BH-A0DX-01A 6 88 In-Frame Intra-chr q22 q22 Tumor suppressor gene Seq+ 23814 ChimerSeq STARFusion TCGA_RNA-Seq SUGP2-MEF2B SUGP2 chr19 19114977 - MEF2B chr19 19297814 - Exonic hg19 BRCA TCGA-BH-A0DX-01A 9 37 CDS-5'UTR Intra-chr p13.11 p13.11 Transcription factor Seq+ 23815 ChimerSeq STARFusion TCGA_RNA-Seq SUGP2-MEF2BNB SUGP2 chr19 19114977 - MEF2BNB chr19 19297814 - Exonic hg19 BRCA TCGA-BH-A0DX-01A 9 37 In-Frame Intra-chr p13.11 23816 ChimerSeq STARFusion TCGA_RNA-Seq TIMM23B-LINC00843 TIMM23B chr10 51387763 + LINC00843 chr10 51732772 + Exonic hg19 BRCA TCGA-BH-A0DX-01A 13 20 Out-of-frame Intra-chr q11.23 q11.23 23817 ChimerSeq STARFusion TCGA_RNA-Seq SUGP2-MEF2B SUGP2 chr19 19114977 - MEF2B chr19 19261573 - Exonic hg19 BRCA TCGA-BH-A0DX-01A 2 37 CDS-5'UTR Intra-chr p13.11 p13.11 Transcription factor Seq+ 23818 ChimerSeq STARFusion TCGA_RNA-Seq ICMT-GPR153 ICMT chr1 6293534 - GPR153 chr1 6315074 - Exonic hg19 BRCA TCGA-BH-A0DX-01A 4 15 CDS-5'UTR Intra-chr p36.31 p36.31 Seq+ 23819 ChimerSeq STARFusion TCGA_RNA-Seq FAF1-PTRH2 FAF1 chr1 51121114 - PTRH2 chr17 57775339 - Exonic hg19 BRCA TCGA-BH-A0DX-01A 4 13 CDS-5'UTR Inter-chr p32.3 q23.1 Seq+ 23820 ChimerSeq STARFusion TCGA_RNA-Seq FAF1-PTRH2 FAF1 chr1 51121114 - PTRH2 chr17 57777550 - Exonic hg19 BRCA TCGA-BH-A0DX-01A 2 13 CDS-5'UTR Inter-chr p32.3 q23.1 Seq+ 23821 ChimerSeq STARFusion TCGA_RNA-Seq ADIPOR1-RGS8 ADIPOR1 chr1 202912886 - RGS8 chr1 182617438 - Exonic hg19 BRCA TCGA-E9-A243-01A 23 73 In-Frame Intra-chr q32.1 q25.3 Seq+ 23822 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-DTD1 SSH2 chr17 28120912 - DTD1 chr20 18724744 + Exonic hg19 BRCA TCGA-E9-A243-01A 19 73 Out-of-frame Inter-chr q11.2 p11.23 Seq+ 23823 ChimerSeq STARFusion TCGA_RNA-Seq ATAD2-PODXL ATAD2 chr8 124351551 - PODXL chr7 131196192 - Exonic hg19 BRCA TCGA-E9-A243-01A 13 45 In-Frame Inter-chr q24.13 q32.3 Seq+ 23824 ChimerSeq STARFusion TCGA_RNA-Seq HILPDA-SND1 HILPDA chr7 128096077 + SND1 chr7 127729541 + Exonic hg19 BRCA TCGA-E9-A243-01A 12 40 5'UTR-CDS Intra-chr q32.1 q32.1 Seq+ 23825 ChimerSeq STARFusion TCGA_RNA-Seq HILPDA-SND1 HILPDA chr7 128097353 + SND1 chr7 127729541 + Exonic hg19 BRCA TCGA-E9-A243-01A 9 40 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 23826 ChimerSeq STARFusion TCGA_RNA-Seq PPP1CB-PLB1 PPP1CB chr2 28975042 + PLB1 chr2 28785908 + Exonic hg19 BRCA TCGA-E9-A243-01A 7 28 In-Frame Intra-chr p23.2 p23.2 Seq+ 23827 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TPST1 WARS2 chr1 119618973 - TPST1 chr7 65817492 + Exonic hg19 BRCA TCGA-E9-A243-01A 3 29 In-Frame Inter-chr p12 q11.21 Seq+ 23828 ChimerSeq STARFusion TCGA_RNA-Seq NFYC-SLC15A3 NFYC chr1 41157539 + SLC15A3 chr11 60714293 - Exonic hg19 BRCA TCGA-E9-A243-01A 2 5 5'UTR-CDS Inter-chr p34.2 Transcription factor q12.2 Seq+ 23829 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86351941 + Exonic hg19 BRCA TCGA-E9-A243-01A 2 0 Out-of-frame Intra-chr q21.2 q21.2 23830 ChimerSeq STARFusion TCGA_RNA-Seq COPS3-TEKT3 COPS3 chr17 17163615 - TEKT3 chr17 15217547 - Exonic hg19 BRCA TCGA-AR-A5QN-01A 2 20 Out-of-frame Intra-chr p11.2 p12 Seq+ 23831 ChimerSeq STARFusion TCGA_RNA-Seq ELL-SMIM7 ELL chr19 18632731 - SMIM7 chr19 16758072 - Exonic hg19 BRCA TCGA-A2-A04U-01A 17 93 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 23832 ChimerSeq STARFusion TCGA_RNA-Seq MDH1-COMMD1 MDH1 chr2 63821720 + COMMD1 chr2 62227836 + Exonic hg19 BRCA TCGA-A2-A04U-01A 10 95 In-Frame Intra-chr p15 p15 Seq+ 23833 ChimerSeq STARFusion TCGA_RNA-Seq ELL-SMIM7 ELL chr19 18632731 - SMIM7 chr19 16764936 - Exonic hg19 BRCA TCGA-A2-A04U-01A 7 93 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 23834 ChimerSeq STARFusion TCGA_RNA-Seq MDH1-COMMD1 MDH1 chr2 63816180 + COMMD1 chr2 62227836 + Exonic hg19 BRCA TCGA-A2-A04U-01A 6 95 In-Frame Intra-chr p15 p15 Seq+ 23835 ChimerSeq STARFusion TCGA_RNA-Seq MSH2-SLC3A1 MSH2 chr2 47637511 + SLC3A1 chr2 44539725 + Exonic hg19 BRCA TCGA-A2-A04U-01A 17 42 In-Frame Intra-chr p21 Oncogene Tumor suppressor gene p21 Seq+ 23836 ChimerSeq STARFusion TCGA_RNA-Seq KPNA1-GOLGB1 KPNA1 chr3 122215284 - GOLGB1 chr3 121388202 - Exonic hg19 BRCA TCGA-A2-A04U-01A 11 42 In-Frame Intra-chr q21.1 q13.33 Seq+ 23837 ChimerSeq STARFusion TCGA_RNA-Seq DOCK1-PPAPDC1A DOCK1 chr10 128788867 + PPAPDC1A chr10 122263330 + Exonic hg19 BRCA TCGA-A2-A04U-01A 4 64 In-Frame Intra-chr q26.2 Seq+ 23838 ChimerSeq STARFusion TCGA_RNA-Seq PSD3-PAGE4 PSD3 chr8 18871073 - PAGE4 chrX 49595002 + Exonic hg19 BRCA TCGA-A2-A04U-01A 10 38 CDS-5'UTR Inter-chr p22 p11.23 Seq+ 23839 ChimerSeq STARFusion TCGA_RNA-Seq DOCK1-PPAPDC1A DOCK1 chr10 128796513 + PPAPDC1A chr10 122263330 + Exonic hg19 BRCA TCGA-A2-A04U-01A 2 64 In-Frame Intra-chr q26.2 Seq+ 23840 ChimerSeq STARFusion TCGA_RNA-Seq LSM14A-FXYD3 LSM14A chr19 34706566 + FXYD3 chr19 35610072 + Exonic hg19 BRCA TCGA-A2-A04U-01A 7 20 In-Frame Intra-chr q13.12 Seq+ 23841 ChimerSeq STARFusion TCGA_RNA-Seq FGF13-NLRP3 FGF13 chrX 137939674 - NLRP3 chr1 247611707 + Exonic hg19 BRCA TCGA-A2-A04U-01A 5 17 Out-of-frame Inter-chr q27.1 q44 Seq+ 23842 ChimerSeq STARFusion TCGA_RNA-Seq NAA25-TBX5 NAA25 chr12 112518864 - TBX5 chr12 114793911 - Exonic hg19 BRCA TCGA-A2-A04U-01A 6 13 Out-of-frame Intra-chr q24.13 q24.21 Tumor suppressor gene Transcription factor Seq+ 23843 ChimerSeq STARFusion TCGA_RNA-Seq INSIG1-DPP6 INSIG1 chr7 155094556 + DPP6 chr7 154263927 + Exonic hg19 BRCA TCGA-A2-A04U-01A 6 12 In-Frame Intra-chr q36.3 Seq+ 23844 ChimerSeq STARFusion TCGA_RNA-Seq POGZ-GBA POGZ chr1 151395873 - GBA chr1 155210971 - Exonic hg19 BRCA TCGA-A2-A04U-01A 4 16 CDS-5'UTR Intra-chr q21.3 Seq+ 23845 ChimerSeq STARFusion TCGA_RNA-Seq POGZ-GBAP1 POGZ chr1 151395873 - GBAP1 chr1 155188733 - Exonic hg19 BRCA TCGA-A2-A04U-01A 8 0 CDS-3'UTR Intra-chr q21.3 q22 23846 ChimerSeq STARFusion TCGA_RNA-Seq NFIC-WDR18 NFIC chr19 3425175 + WDR18 chr19 989762 + Exonic hg19 BRCA TCGA-A2-A04U-01A 4 12 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 23847 ChimerSeq STARFusion TCGA_RNA-Seq RWDD3-CCDC18 RWDD3 chr1 95705465 + CCDC18 chr1 93711662 + Exonic hg19 BRCA TCGA-A2-A04U-01A 3 13 5'UTR-CDS Intra-chr p21.3 p22.1 Seq+ 23848 ChimerSeq STARFusion TCGA_RNA-Seq SMAD4-LOC100287225 SMAD4 chr18 48593557 + LOC100287225 chr18 48991777 + Exonic hg19 BRCA TCGA-A2-A04U-01A 3 13 CDS-5'UTR Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor 23849 ChimerSeq STARFusion TCGA_RNA-Seq CDK7-MAST4 CDK7 chr5 68531280 + MAST4 chr5 66282272 + Exonic hg19 BRCA TCGA-A2-A04U-01A 2 14 Out-of-frame Intra-chr CMGC:CDK q12.3 AGC:MAST 23850 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-PLA2G6 MYH9 chr22 36783852 - PLA2G6 chr22 38565478 - Exonic hg19 BRCA TCGA-A2-A04U-01A 3 10 5'UTR-5'UTR Intra-chr q12.3 Oncogene Tumor suppressor gene q13.1 Seq+ 23851 ChimerSeq STARFusion TCGA_RNA-Seq BCAT1-ITPR2 BCAT1 chr12 25101861 - ITPR2 chr12 26493261 - Exonic hg19 BRCA TCGA-A2-A04U-01A 3 9 In-Frame Intra-chr p12.1 p11.23 Seq+ 23852 ChimerSeq STARFusion TCGA_RNA-Seq SMG6-NXN SMG6 chr17 2075952 - NXN chr17 704371 - Exonic hg19 BRCA TCGA-A2-A04U-01A 3 9 In-Frame Intra-chr p13.3 p13.3 Seq+ 23853 ChimerSeq STARFusion TCGA_RNA-Seq URB1-TMEM50B URB1 chr21 33735465 - TMEM50B chr21 34805109 - Exonic hg19 BRCA TCGA-A2-A04U-01A 3 7 CDS-3'UTR Intra-chr q22.11 Seq+ 23854 ChimerSeq STARFusion TCGA_RNA-Seq PDE7A-COPS5 PDE7A chr8 66636490 - COPS5 chr8 67958195 - Exonic hg19 BRCA TCGA-A2-A04U-01A 3 4 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 23855 ChimerSeq STARFusion TCGA_RNA-Seq PTBP2-CASQ1 PTBP2 chr1 97272514 + CASQ1 chr1 160164802 + Exonic hg19 BRCA TCGA-A2-A04U-01A 3 4 Out-of-frame Intra-chr p21.3 q23.2 Seq+ 23856 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC9-TSTA3 TRAPPC9 chr8 140898123 - TSTA3 chr8 144697085 - Exonic hg19 BRCA TCGA-A2-A04U-01A 3 4 Out-of-frame Intra-chr q24.3 Seq+ 23857 ChimerSeq STARFusion TCGA_RNA-Seq MAGI3-RAP1A MAGI3 chr1 113933971 + RAP1A chr1 112245958 + Exonic hg19 BRCA TCGA-A2-A04U-01A 2 7 Out-of-frame Intra-chr p13.2 p13.2 Tumor suppressor gene Seq+ 23858 ChimerSeq STARFusion TCGA_RNA-Seq TOB2-A4GALT TOB2 chr22 41842383 - A4GALT chr22 43091637 - Exonic hg19 BRCA TCGA-A2-A04U-01A 3 1 5'UTR-5'UTR Intra-chr q13.2 q13.2 23859 ChimerSeq STARFusion TCGA_RNA-Seq UQCC-KIAA1755 UQCC chr20 33954360 - KIAA1755 chr20 36856642 - Exonic hg19 BRCA TCGA-A2-A04U-01A 2 4 In-Frame Intra-chr q11.23 Seq+ 23860 ChimerSeq STARFusion TCGA_RNA-Seq SHCBP1-ABCC12 SHCBP1 chr16 46629464 - ABCC12 chr16 48172286 - Exonic hg19 BRCA TCGA-A2-A04U-01A 2 2 In-Frame Intra-chr q11.2 q12.1 23861 ChimerSeq STARFusion TCGA_RNA-Seq YEATS2-EIF4G1 YEATS2 chr3 183472153 + EIF4G1 chr3 184052515 + Exonic hg19 BRCA TCGA-A2-A04U-01A 2 1 In-Frame Intra-chr q27.1 q27.1 23862 ChimerSeq STARFusion TCGA_RNA-Seq CKAP5-SSB CKAP5 chr11 46776438 - SSB chr2 170663295 + Exonic hg19 BRCA TCGA-A2-A04U-01A 2 0 In-Frame Inter-chr p11.2 q31.1 23863 ChimerSeq STARFusion TCGA_RNA-Seq ADPRHL2-SHPK ADPRHL2 chr1 36554716 + SHPK chr17 3533640 - Exonic hg19 BRCA TCGA-AR-A5QP-01A 3 14 Out-of-frame Inter-chr p34.3 p13.2 Seq+ 23864 ChimerSeq STARFusion TCGA_RNA-Seq ZNF461-MATN2 ZNF461 chr19 37155600 - MATN2 chr8 98900303 + Exonic hg19 BRCA TCGA-AC-A5XU-01A 28 166 CDS-5'UTR Inter-chr q13.12 Transcription factor q22.1 Seq+ 23865 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB6-UBE3C DNAJB6 chr7 157160177 + UBE3C chr7 157060279 + Exonic hg19 BRCA TCGA-AC-A5XU-01A 11 148 Out-of-frame Intra-chr q36.3 q36.3 23866 ChimerSeq STARFusion TCGA_RNA-Seq TRPS1-C19orf66 TRPS1 chr8 116599228 - C19orf66 chr19 10200333 + Exonic hg19 BRCA TCGA-AC-A5XU-01A 24 81 In-Frame Inter-chr q23.3 Transcription factor p13.2 Seq+ 23867 ChimerSeq STARFusion TCGA_RNA-Seq SUZ12P1-BLVRB SUZ12P1 chr17 29036829 + BLVRB chr19 40964452 - Exonic hg19 BRCA TCGA-AC-A5XU-01A 21 86 5'UTR-CDS Inter-chr q11.2 q13.2 Seq+ 23868 ChimerSeq STARFusion TCGA_RNA-Seq TAF2-ALDH16A1 TAF2 chr8 120843917 - ALDH16A1 chr19 49967111 + Exonic hg19 BRCA TCGA-AC-A5XU-01A 8 69 In-Frame Inter-chr q24.12 q13.33 Seq+ 23869 ChimerSeq STARFusion TCGA_RNA-Seq TAF2-ALDH16A1 TAF2 chr8 120843917 - ALDH16A1 chr19 49967384 + Exonic hg19 BRCA TCGA-AC-A5XU-01A 2 69 In-Frame Inter-chr q24.12 q13.33 Seq+ 23870 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H3-KLK3 ZC3H3 chr8 144547887 - KLK3 chr19 51359496 + Exonic hg19 BRCA TCGA-AC-A5XU-01A 3 27 Out-of-frame Inter-chr q13.33 Seq+ 23871 ChimerSeq STARFusion TCGA_RNA-Seq FZR1-NFIC FZR1 chr19 3506472 + NFIC chr19 3425104 + Exonic hg19 BRCA TCGA-AC-A5XU-01A 6 11 5'UTR-CDS Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Transcription factor Seq+ 23872 ChimerSeq STARFusion TCGA_RNA-Seq ZNF415-EIF3H ZNF415 chr19 53618957 - EIF3H chr8 117671219 - Exonic hg19 BRCA TCGA-AC-A5XU-01A 2 20 3'UTR-CDS Inter-chr q13.42 Transcription factor q24.11 Seq+ 23873 ChimerSeq STARFusion TCGA_RNA-Seq BPTF-ARSG BPTF chr17 65944422 + ARSG chr17 66339745 + Exonic hg19 BRCA TCGA-AC-A5XU-01A 3 9 Out-of-frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 23874 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2A-PRKACA GATAD2A chr19 19496947 + PRKACA chr19 14204604 - Exonic hg19 BRCA TCGA-AC-A5XU-01A 2 10 5'UTR-CDS Intra-chr p13.11 Transcription factor p13.12 Seq+ 23875 ChimerSeq STARFusion TCGA_RNA-Seq ARSG-PRKCA ARSG chr17 66352945 + PRKCA chr17 64492319 + Exonic hg19 BRCA TCGA-AC-A5XU-01A 3 5 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 23876 ChimerSeq STARFusion TCGA_RNA-Seq KAT6A-KLK4 KAT6A chr8 41798360 - KLK4 chr19 51412085 - Exonic hg19 BRCA TCGA-AC-A5XU-01A 2 9 Out-of-frame Inter-chr p11.21 Oncogene q13.41 Seq+ 23877 ChimerSeq STARFusion TCGA_RNA-Seq CDC42EP5-CYTH1 CDC42EP5 chr19 54982766 - CYTH1 chr17 76705814 - Exonic hg19 BRCA TCGA-AC-A5XU-01A 2 6 5'UTR-CDS Inter-chr q25.3 Seq+ 23878 ChimerSeq STARFusion TCGA_RNA-Seq PRKCA-CDH8 PRKCA chr17 64685165 + CDH8 chr16 61935377 - Exonic hg19 BRCA TCGA-AC-A5XU-01A 2 4 In-Frame Inter-chr q24.2 q21 Seq+ 23879 ChimerSeq STARFusion TCGA_RNA-Seq ZNF773-PPP2R1A ZNF773 chr19 58011481 + PPP2R1A chr19 52705197 + Exonic hg19 BRCA TCGA-OL-A5RV-01A 4 12 In-Frame Intra-chr q13.43 Transcription factor q13.41 Oncogene Seq+ 23880 ChimerSeq STARFusion TCGA_RNA-Seq MPV17L-C16orf45 MPV17L chr16 15490064 + C16orf45 chr16 15609162 + Exonic hg19 BRCA TCGA-OL-A5RV-01A 2 0 In-Frame Intra-chr p13.11 23881 ChimerSeq STARFusion TCGA_RNA-Seq ZNF341-DYNLRB1 ZNF341 chr20 32345128 + DYNLRB1 chr20 33128385 + Exonic hg19 BRCA TCGA-C8-A12T-01A 22 133 In-Frame Intra-chr q11.22 Transcription factor q11.22 Seq+ 23882 ChimerSeq STARFusion TCGA_RNA-Seq ZNF341-DYNLRB1 ZNF341 chr20 32345149 + DYNLRB1 chr20 33128385 + Exonic hg19 BRCA TCGA-C8-A12T-01A 13 133 Out-of-frame Intra-chr q11.22 Transcription factor q11.22 Seq+ 23883 ChimerSeq STARFusion TCGA_RNA-Seq RBL1-NDRG3 RBL1 chr20 35651053 - NDRG3 chr20 35335410 - Exonic hg19 BRCA TCGA-C8-A12T-01A 19 44 In-Frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 23884 ChimerSeq STARFusion TCGA_RNA-Seq GABPB1-GALK2 GABPB1 chr15 50647182 - GALK2 chr15 49611801 + Exonic hg19 BRCA TCGA-C8-A12T-01A 8 33 5'UTR-CDS Intra-chr q21.2 q21.1 Seq+ 23885 ChimerSeq STARFusion TCGA_RNA-Seq NADK-GNB1 NADK chr1 1709728 - GNB1 chr1 1770677 - Exonic hg19 BRCA TCGA-C8-A12T-01A 2 0 5'UTR-5'UTR Intra-chr p36.33 p36.33 Seq+ 23886 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890980 - BCAR4 chr16 11914154 - Exonic hg19 BRCA TCGA-OL-A66N-01A 6 9 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 23887 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-BCAR4 CTTN chr11 70256066 + BCAR4 chr16 11914154 - Exonic hg19 BRCA TCGA-B6-A40B-01A 80 349 CDS-3'UTR Inter-chr q13.3 p13.13 Seq+ 23888 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-BCAR4 CTTN chr11 70256066 + BCAR4 chr16 11915612 - Exonic hg19 BRCA TCGA-B6-A40B-01A 24 349 CDS-3'UTR Inter-chr q13.3 p13.13 Seq+ 23889 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 BRCA TCGA-B6-A40B-01A 2 0 In-Frame Intra-chr p11.21 p11.21 23890 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSD1 PRSS27 chr16 2763530 - TPSD1 chr16 1308333 + Exonic hg19 BRCA TCGA-A2-A0CS-01A 11 14 In-Frame Intra-chr p13.3 p13.3 23891 ChimerSeq STARFusion TCGA_RNA-Seq FOCAD-GGT5 FOCAD chr9 20929595 + GGT5 chr22 24629972 - Exonic hg19 BRCA TCGA-E9-A54X-01A 6 10 In-Frame Inter-chr p21.3 q11.23 Seq+ 23892 ChimerSeq STARFusion TCGA_RNA-Seq CARTPT-MCCC2 CARTPT chr5 71015790 + MCCC2 chr5 70936830 + Exonic hg19 BRCA TCGA-E9-A54X-01A 2 7 In-Frame Intra-chr q13.2 q13.2 Seq+ 23893 ChimerSeq STARFusion TCGA_RNA-Seq PTPRD-RAC2 PTPRD chr9 10612398 - RAC2 chr22 37637698 - Exonic hg19 BRCA TCGA-E9-A54X-01A 2 1 5'UTR-CDS Inter-chr Oncogene Tumor suppressor gene q13.1 Seq+ 23894 ChimerSeq STARFusion TCGA_RNA-Seq FLJ27365-ATXN10 FLJ27365 chr22 46449800 + ATXN10 chr22 46202839 + Exonic hg19 BRCA TCGA-AQ-A04J-01A 19 35 Out-of-frame Intra-chr q13.31 23895 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-RPH3AL PUM1 chr1 31532051 - RPH3AL chr17 169340 - Exonic hg19 BRCA TCGA-AQ-A04J-01A 6 33 Out-of-frame Inter-chr p35.2 Seq+ 23896 ChimerSeq STARFusion TCGA_RNA-Seq NUP153-RNF2 NUP153 chr6 17706508 - RNF2 chr1 185056684 + Exonic hg19 BRCA TCGA-AQ-A04J-01A 7 26 CDS-5'UTR Inter-chr p22.3 q25.3 Oncogene Seq+ 23897 ChimerSeq STARFusion TCGA_RNA-Seq APOLD1-CDKN1B APOLD1 chr12 12879030 + CDKN1B chr12 12873970 + Exonic hg19 BRCA TCGA-AQ-A04J-01A 8 18 CDS-3'UTR Intra-chr p13.1 p13.1 Tumor suppressor gene Seq+ 23898 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2A-AIF1 PRRC2A chr6 31592299 + AIF1 chr6 31583298 + Exonic hg19 BRCA TCGA-AQ-A04J-01A 2 17 In-Frame Intra-chr Tumor suppressor gene Seq+ 23899 ChimerSeq STARFusion TCGA_RNA-Seq LSM10-CLSTN1 LSM10 chr1 36859367 - CLSTN1 chr1 9790763 - Exonic hg19 BRCA TCGA-AQ-A04J-01A 2 12 Out-of-frame Intra-chr p34.3 p36.22 Seq+ 23900 ChimerSeq STARFusion TCGA_RNA-Seq RASGRP1-LRRC4C RASGRP1 chr15 38852022 - LRRC4C chr11 40162403 - Exonic hg19 BRCA TCGA-B6-A0RG-01A 3 13 CDS-5'UTR Inter-chr q14 p12 Seq+ 23901 ChimerSeq STARFusion TCGA_RNA-Seq RASGRP1-LRRC4C RASGRP1 chr15 38852022 - LRRC4C chr11 40137884 - Exonic hg19 BRCA TCGA-B6-A0RG-01A 2 13 CDS-5'UTR Inter-chr q14 p12 Seq+ 23902 ChimerSeq STARFusion TCGA_RNA-Seq NUCKS1-GNAS NUCKS1 chr1 205719085 - GNAS chr20 57470667 + Exonic hg19 BRCA TCGA-B6-A0RG-01A 2 0 Out-of-frame Inter-chr q32.1 q13.32 Oncogene 23903 ChimerSeq STARFusion TCGA_RNA-Seq TLK2-DCAF7 TLK2 chr17 60685509 + DCAF7 chr17 61655831 + Exonic hg19 BRCA TCGA-AC-A62V-01A 39 74 In-Frame Intra-chr q23.2 Other:TLK q23.3 Seq+ 23904 ChimerSeq STARFusion TCGA_RNA-Seq RBM39-VMP1 RBM39 chr20 34309662 - VMP1 chr17 57842332 + Exonic hg19 BRCA TCGA-AC-A62V-01A 33 69 In-Frame Inter-chr q11.22 q23.1 Seq+ 23905 ChimerSeq STARFusion TCGA_RNA-Seq PIGU-BCAS3 PIGU chr20 33231968 - BCAS3 chr17 59445688 + Exonic hg19 BRCA TCGA-AC-A62V-01A 19 56 Out-of-frame Inter-chr q11.22 q23.2 Seq+ 23906 ChimerSeq STARFusion TCGA_RNA-Seq CLK2-CD244 CLK2 chr1 155239279 - CD244 chr1 160808839 - Exonic hg19 BRCA TCGA-AC-A62V-01A 10 40 Out-of-frame Intra-chr q22 CMGC:CLK q23.3 Seq+ 23907 ChimerSeq STARFusion TCGA_RNA-Seq PMEPA1-RALY PMEPA1 chr20 56284530 - RALY chr20 32619328 + Exonic hg19 BRCA TCGA-AC-A62V-01A 7 37 CDS-5'UTR Intra-chr q13.31 q11.22 Seq+ 23908 ChimerSeq STARFusion TCGA_RNA-Seq HEATR6-C17orf64 HEATR6 chr17 58153491 - C17orf64 chr17 58508542 + Exonic hg19 BRCA TCGA-AC-A62V-01A 3 42 Out-of-frame Intra-chr q23.1 q23.2 Seq+ 23909 ChimerSeq STARFusion TCGA_RNA-Seq PIGU-PITPNC1 PIGU chr20 33231968 - PITPNC1 chr17 65528918 + Exonic hg19 BRCA TCGA-AC-A62V-01A 2 18 In-Frame Inter-chr q11.22 q24.2 Seq+ 23910 ChimerSeq STARFusion TCGA_RNA-Seq MIPOL1-LINC00639 MIPOL1 chr14 37667309 + LINC00639 chr14 39360002 - Exonic hg19 BRCA TCGA-AC-A62V-01A 3 13 Out-of-frame Intra-chr q13.3 q21.1 23911 ChimerSeq STARFusion TCGA_RNA-Seq CDH4-SLA2 CDH4 chr20 60448956 + SLA2 chr20 35262992 - Exonic hg19 BRCA TCGA-AC-A62V-01A 3 6 Out-of-frame Intra-chr q13.33 Tumor suppressor gene q11.23 Seq+ 23912 ChimerSeq STARFusion TCGA_RNA-Seq HAP1-GAST HAP1 chr17 39887745 - GAST chr17 39871684 + Exonic hg19 BRCA TCGA-AC-A62V-01A 2 5 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 23913 ChimerSeq STARFusion TCGA_RNA-Seq XPO6-GSG1L XPO6 chr16 28112779 - GSG1L chr16 27974524 - Exonic hg19 BRCA TCGA-AC-A62V-01A 3 1 Out-of-frame Intra-chr p12.1 p12.1 23914 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-RPS6KB1 CLTC chr17 57746301 + RPS6KB1 chr17 57987923 + Exonic hg19 BRCA TCGA-AC-A62V-01A 2 2 In-Frame Intra-chr q23.1 q23.1 Oncogene 23915 ChimerSeq STARFusion TCGA_RNA-Seq SLC2A4RG-TAF4 SLC2A4RG chr20 62372832 + TAF4 chr20 60551391 - Exonic hg19 BRCA TCGA-AC-A62V-01A 2 2 Out-of-frame Intra-chr q13.33 Transcription factor 23916 ChimerSeq STARFusion TCGA_RNA-Seq USP11-RER1 USP11 chrX 47092618 + RER1 chr1 2327223 + Exonic hg19 BRCA TCGA-AC-A62V-01A 2 0 CDS-5'UTR Inter-chr p11.3 p36.32 23917 ChimerSeq STARFusion TCGA_RNA-Seq SETDB2-ERH SETDB2 chr13 50042096 + ERH chr14 69847357 - Exonic hg19 BRCA TCGA-BH-A0EE-01A 66 359 In-Frame Inter-chr q14.2 Transcription factor q24.1 Seq+ 23918 ChimerSeq STARFusion TCGA_RNA-Seq KPNA3-FLJ22447 KPNA3 chr13 50366574 - FLJ22447 chr14 62117680 + Exonic hg19 BRCA TCGA-BH-A0EE-01A 16 34 CDS-5'UTR Inter-chr q14.2 q23.1 Seq+ 23919 ChimerSeq STARFusion TCGA_RNA-Seq CATSPERB-TRIP11 CATSPERB chr14 92126181 - TRIP11 chr14 92439205 - Exonic hg19 BRCA TCGA-BH-A0EE-01A 12 39 Out-of-frame Intra-chr q32.12 Oncogene Seq+ 23920 ChimerSeq STARFusion TCGA_RNA-Seq DOPEY2-TRPM2 DOPEY2 chr21 37537169 + TRPM2 chr21 45825025 + Exonic hg19 BRCA TCGA-BH-A0EE-01A 14 22 In-Frame Intra-chr q22.12 q22.3 Tumor suppressor gene Seq+ 23921 ChimerSeq STARFusion TCGA_RNA-Seq DGCR2-DESI1 DGCR2 chr22 19028571 - DESI1 chr22 42003865 - Exonic hg19 BRCA TCGA-BH-A0EE-01A 7 42 Out-of-frame Intra-chr q11.21 q13.2 Seq+ 23922 ChimerSeq STARFusion TCGA_RNA-Seq CATSPERB-TRIP11 CATSPERB chr14 92136158 - TRIP11 chr14 92439205 - Exonic hg19 BRCA TCGA-BH-A0EE-01A 4 39 In-Frame Intra-chr q32.12 Oncogene Seq+ 23923 ChimerSeq STARFusion TCGA_RNA-Seq TC2N-TRIP11 TC2N chr14 92302715 - TRIP11 chr14 92460256 - Exonic hg19 BRCA TCGA-BH-A0EE-01A 6 22 5'UTR-CDS Intra-chr q32.12 Oncogene Seq+ 23924 ChimerSeq STARFusion TCGA_RNA-Seq TC2N-TRIP11 TC2N chr14 92302527 - TRIP11 chr14 92460256 - Exonic hg19 BRCA TCGA-BH-A0EE-01A 5 22 5'UTR-CDS Intra-chr q32.12 Oncogene Seq+ 23925 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-RHBDF2 FBXL20 chr17 37455243 - RHBDF2 chr17 74483991 - Exonic hg19 BRCA TCGA-BH-A0EE-01A 6 10 CDS-5'UTR Intra-chr q12 q25.1 Seq+ 23926 ChimerSeq STARFusion TCGA_RNA-Seq DOPEY2-TRPM2 DOPEY2 chr21 37537169 + TRPM2 chr21 45825022 + Exonic hg19 BRCA TCGA-BH-A0EE-01A 2 22 CDS-5'UTR Intra-chr q22.12 q22.3 Tumor suppressor gene Seq+ 23927 ChimerSeq STARFusion TCGA_RNA-Seq LSM14A-ACTN4 LSM14A chr19 34663668 + ACTN4 chr19 39191240 + Exonic hg19 BRCA TCGA-AQ-A0Y5-01A 83 316 Out-of-frame Intra-chr Seq+ 23928 ChimerSeq STARFusion TCGA_RNA-Seq PHOSPHO1-KRT23 PHOSPHO1 chr17 47304009 - KRT23 chr17 39086348 - Exonic hg19 BRCA TCGA-AQ-A0Y5-01A 8 97 Out-of-frame Intra-chr q21.32 Seq+ 23929 ChimerSeq STARFusion TCGA_RNA-Seq PHOSPHO1-KRT23 PHOSPHO1 chr17 47307830 - KRT23 chr17 39086348 - Exonic hg19 BRCA TCGA-AQ-A0Y5-01A 6 97 5'UTR-CDS Intra-chr q21.32 Seq+ 23930 ChimerSeq STARFusion TCGA_RNA-Seq MAP2K2-CAMKK1 MAP2K2 chr19 4110507 - CAMKK1 chr17 3789024 - Exonic hg19 BRCA TCGA-AQ-A0Y5-01A 4 14 CDS-5'UTR Inter-chr p13.3 STE:STE7 Oncogene p13.2 Seq+ 23931 ChimerSeq STARFusion TCGA_RNA-Seq MMD-LRRC37A11P MMD chr17 53485107 - LRRC37A11P chr17 37200641 + Exonic hg19 BRCA TCGA-AQ-A0Y5-01A 2 15 CDS-5'UTR Intra-chr q22 q12 Seq+ 23932 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-USP32 BCAS3 chr17 58767122 + USP32 chr17 58422969 - Exonic hg19 BRCA TCGA-AQ-A0Y5-01A 2 2 In-Frame Intra-chr q23.2 q23.2 23933 ChimerSeq STARFusion TCGA_RNA-Seq MSI2-BCAS1 MSI2 chr17 55607085 + BCAS1 chr20 52574036 - Exonic hg19 BRCA TCGA-AQ-A0Y5-01A 2 0 Out-of-frame Inter-chr q22 q13.2 23934 ChimerSeq STARFusion TCGA_RNA-Seq SCGB2A2-CHD8 SCGB2A2 chr11 62040586 + CHD8 chr14 21876927 - Exonic hg19 BRCA TCGA-E2-A1IJ-01A 5 1 Out-of-frame Inter-chr q12.3 q11.2 23935 ChimerSeq STARFusion TCGA_RNA-Seq FGFR2-ATE1 FGFR2 chr10 123243212 - ATE1 chr10 123549804 - Exonic hg19 BRCA TCGA-AN-A0AK-01A 6 7 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q26.13 Seq+ 23936 ChimerSeq STARFusion TCGA_RNA-Seq ZEB2-ARHGAP15 ZEB2 chr2 145182363 - ARHGAP15 chr2 144460988 + Exonic hg19 BRCA TCGA-AN-A0AK-01A 2 0 In-Frame Intra-chr q22.3 Transcription factor q22.2 23937 ChimerSeq STARFusion TCGA_RNA-Seq PCCA-CLYBL PCCA chr13 100888132 + CLYBL chr13 100425078 + Exonic hg19 BRCA TCGA-E2-A1IE-01A 3 9 Out-of-frame Intra-chr q32.3 q32.3 Seq+ 23938 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12022903 + NTRK3 chr15 88483984 - Exonic hg19 BRCA TCGA-AO-A03U-01B 32 72 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 23939 ChimerSeq STARFusion TCGA_RNA-Seq BCL7A-KCNIP3 BCL7A chr12 122473333 + KCNIP3 chr2 96040044 + Exonic hg19 BRCA TCGA-AO-A03U-01B 16 42 In-Frame Inter-chr q11.1 Transcription factor Seq+ 23940 ChimerSeq STARFusion TCGA_RNA-Seq TRIP12-COL6A3 TRIP12 chr2 230654327 - COL6A3 chr2 238305490 - Exonic hg19 BRCA TCGA-AO-A03U-01B 2 16 CDS-5'UTR Intra-chr q36.3 q37.3 Seq+ 23941 ChimerSeq STARFusion TCGA_RNA-Seq ELP4-IGKC ELP4 chr11 31653822 + IGKC chr2 89161435 - Exonic hg19 BRCA TCGA-EW-A1IZ-01A 11 0 Out-of-frame Inter-chr p13 p11.2 23942 ChimerSeq STARFusion TCGA_RNA-Seq ELP4-IGKJ1 ELP4 chr11 31653822 + IGKJ1 chr2 89161435 - Exonic hg19 BRCA TCGA-EW-A1IZ-01A 11 0 Out-of-frame Inter-chr p13 p11.2 23943 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-UBE2W IGH@ chr14 106667729 - UBE2W chr8 74705903 - Exonic hg19 BRCA TCGA-EW-A1IZ-01A 7 1 Out-of-frame Inter-chr 32.33 q21.11 23944 ChimerSeq STARFusion TCGA_RNA-Seq MLH1-GOLGA4 MLH1 chr3 37050396 + GOLGA4 chr3 37376544 + Exonic hg19 BRCA TCGA-EW-A1IZ-01A 4 6 Out-of-frame Intra-chr p22.2 Oncogene Tumor suppressor gene p22.2 Seq+ 23945 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 BRCA TCGA-EW-A1IZ-01A 4 3 In-Frame Intra-chr p13.3 p13.3 23946 ChimerSeq STARFusion TCGA_RNA-Seq MLH1-GOLGA4 MLH1 chr3 37048554 + GOLGA4 chr3 37376544 + Exonic hg19 BRCA TCGA-EW-A1IZ-01A 2 6 In-Frame Intra-chr p22.2 Oncogene Tumor suppressor gene p22.2 Seq+ 23947 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-THEMIS PTPRK chr6 128505577 - THEMIS chr6 128031161 - Exonic hg19 BRCA TCGA-AN-A0FW-01A 203 387 In-Frame Intra-chr Tumor suppressor gene Seq+ 23948 ChimerSeq STARFusion TCGA_RNA-Seq MSI2-SLC39A11 MSI2 chr17 55339553 + SLC39A11 chr17 71027853 - Exonic hg19 BRCA TCGA-AN-A0FW-01A 48 138 In-Frame Intra-chr q22 q25.1 Seq+ 23949 ChimerSeq STARFusion TCGA_RNA-Seq SUPT4H1-PSMD12 SUPT4H1 chr17 56428763 - PSMD12 chr17 65341973 - Exonic hg19 BRCA TCGA-AN-A0FW-01A 30 63 Out-of-frame Intra-chr q22 q24.2 Seq+ 23950 ChimerSeq STARFusion TCGA_RNA-Seq DDX42-DCAF7 DDX42 chr17 61851736 + DCAF7 chr17 61655831 + Exonic hg19 BRCA TCGA-AN-A0FW-01A 8 83 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 23951 ChimerSeq STARFusion TCGA_RNA-Seq DLG1-PIGZ DLG1 chr3 196921296 - PIGZ chr3 196678902 - Exonic hg19 BRCA TCGA-AN-A0FW-01A 15 45 CDS-5'UTR Intra-chr q29 Tumor suppressor gene q29 Seq+ 23952 ChimerSeq STARFusion TCGA_RNA-Seq SOGA1-MROH8 SOGA1 chr20 35491061 - MROH8 chr20 35738758 - Exonic hg19 BRCA TCGA-AN-A0FW-01A 9 17 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 23953 ChimerSeq STARFusion TCGA_RNA-Seq UQCR11-CERS4 UQCR11 chr19 1605359 - CERS4 chr19 8271638 + Exonic hg19 BRCA TCGA-AN-A0FW-01A 3 37 CDS-5'UTR Intra-chr p13.3 p13.2 Seq+ 23954 ChimerSeq STARFusion TCGA_RNA-Seq ZPLD1-NXPE3 ZPLD1 chr3 101948185 + NXPE3 chr3 101535639 + Exonic hg19 BRCA TCGA-AN-A0FW-01A 5 28 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 23955 ChimerSeq STARFusion TCGA_RNA-Seq AHNAK-HNRNPUL2 AHNAK chr11 62314132 - HNRNPUL2 chr11 62505041 - Exonic hg19 BRCA TCGA-AN-A0FW-01A 8 12 5'UTR-5'UTR Intra-chr q12.3 Tumor suppressor gene q12.3 23956 ChimerSeq STARFusion TCGA_RNA-Seq UQCR11-CERS4 UQCR11 chr19 1605359 - CERS4 chr19 8306225 + Exonic hg19 BRCA TCGA-AN-A0FW-01A 2 35 CDS-5'UTR Intra-chr p13.3 p13.2 Seq+ 23957 ChimerSeq STARFusion TCGA_RNA-Seq UQCR11-CERS4 UQCR11 chr19 1605359 - CERS4 chr19 8306225 + Exonic hg19 BRCA TCGA-AN-A0FW-01A 2 35 CDS-5'UTR Intra-chr p13.3 p13.2 Seq+ 23958 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB2-SYNE1 ZBTB2 chr6 151694600 - SYNE1 chr6 152570397 - Exonic hg19 BRCA TCGA-AN-A0FW-01A 5 20 Out-of-frame Intra-chr q25.1 Transcription factor q25.2 Oncogene Seq+ 23959 ChimerSeq STARFusion TCGA_RNA-Seq PDZD7-TLX1NB PDZD7 chr10 102789751 - TLX1NB chr10 102886855 - Exonic hg19 BRCA TCGA-AN-A0FW-01A 2 10 CDS-5'UTR Intra-chr q24.31 q24.31 Seq+ 23960 ChimerSeq STARFusion TCGA_RNA-Seq PCBP2-TMED2 PCBP2 chr12 53862616 + TMED2 chr12 124082475 + Exonic hg19 BRCA TCGA-LD-A7W6-01A 6 46 CDS-3'UTR Intra-chr q13.13 q24.31 Seq+ 23961 ChimerSeq STARFusion TCGA_RNA-Seq NR2C2AP-MAP1S NR2C2AP chr19 19312740 - MAP1S chr19 17835858 + Exonic hg19 BRCA TCGA-LD-A7W6-01A 4 44 In-Frame Intra-chr p13.11 p13.11 Seq+ 23962 ChimerSeq STARFusion TCGA_RNA-Seq C11orf30-LRP5 C11orf30 chr11 76175124 + LRP5 chr11 68153784 + Exonic hg19 BRCA TCGA-LD-A7W6-01A 7 20 Out-of-frame Intra-chr q13.2 Seq+ 23963 ChimerSeq STARFusion TCGA_RNA-Seq ZFP91-RAB6A ZFP91 chr11 58352357 + RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-A8-A086-01A 7 26 Out-of-frame Intra-chr q12.1 Transcription factor q13.4 Seq+ 23964 ChimerSeq STARFusion TCGA_RNA-Seq USP22-MYH10 USP22 chr17 20919065 - MYH10 chr17 8508300 - Exonic hg19 BRCA TCGA-A8-A086-01A 5 15 Out-of-frame Intra-chr p11.2 p13.1 Seq+ 23965 ChimerSeq STARFusion TCGA_RNA-Seq NUMA1-PTH NUMA1 chr11 71791504 - PTH chr11 13514407 - Exonic hg19 BRCA TCGA-A8-A086-01A 7 6 5'UTR-5'UTR Intra-chr q13.4 Oncogene p15.3 Seq+ 23966 ChimerSeq STARFusion TCGA_RNA-Seq INTS4-PPFIA1 INTS4 chr11 77690042 - PPFIA1 chr11 70218321 + Exonic hg19 BRCA TCGA-A8-A086-01A 3 19 In-Frame Intra-chr q14.1 q13.3 Seq+ 23967 ChimerSeq STARFusion TCGA_RNA-Seq CNEP1R1-ANK1 CNEP1R1 chr16 50060378 + ANK1 chr8 41615655 - Exonic hg19 BRCA TCGA-A8-A086-01A 4 7 Out-of-frame Inter-chr q12.1 p11.21 Seq+ 23968 ChimerSeq STARFusion TCGA_RNA-Seq YAP1-STIM1 YAP1 chr11 102080295 + STIM1 chr11 4045103 + Exonic hg19 BRCA TCGA-A8-A086-01A 2 12 In-Frame Intra-chr q22.1 Tumor suppressor gene p15.4 Seq+ 23969 ChimerSeq STARFusion TCGA_RNA-Seq MRPL48-DTX4 MRPL48 chr11 73536841 + DTX4 chr11 58972149 + Exonic hg19 BRCA TCGA-A8-A086-01A 3 4 In-Frame Intra-chr q13.4 q12.1 Seq+ 23970 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHB1-NUMA1 PLEKHB1 chr11 73362935 + NUMA1 chr11 71735399 - Exonic hg19 BRCA TCGA-A8-A086-01A 2 3 In-Frame Intra-chr q13.4 q13.4 Oncogene Seq+ 23971 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC2-MYO1D ZCCHC2 chr18 60209807 + MYO1D chr17 31082680 - Exonic hg19 BRCA TCGA-A8-A086-01A 2 0 In-Frame Inter-chr q21.33 q11.2 23972 ChimerSeq STARFusion TCGA_RNA-Seq RYK-RABL3 RYK chr3 133913926 - RABL3 chr3 120417420 - Exonic hg19 BRCA TCGA-BH-A0DL-01A 7 37 In-Frame Intra-chr q22.2 TK:Ryk q13.33 Seq+ 23973 ChimerSeq STARFusion TCGA_RNA-Seq RYK-RABL3 RYK chr3 133921574 - RABL3 chr3 120417420 - Exonic hg19 BRCA TCGA-BH-A0DL-01A 6 37 Out-of-frame Intra-chr q22.2 TK:Ryk q13.33 Seq+ 23974 ChimerSeq STARFusion TCGA_RNA-Seq ETFA-ADPGK ETFA chr15 76603691 - ADPGK chr15 73052868 - Exonic hg19 BRCA TCGA-BH-A0DL-01A 2 5 In-Frame Intra-chr q24.3 q24.1 23975 ChimerSeq STARFusion TCGA_RNA-Seq SYNE2-KIAA0391 SYNE2 chr14 64453335 + KIAA0391 chr14 35735933 + Exonic hg19 BRCA TCGA-A8-A079-01A 73 363 In-Frame Intra-chr q23.2 q13.2 Seq+ 23976 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-GHRH EPB41L1 chr20 34700402 + GHRH chr20 35884901 - Exonic hg19 BRCA TCGA-A8-A079-01A 4 418 5'UTR-CDS Intra-chr q11.23 q11.23 Seq+ 23977 ChimerSeq STARFusion TCGA_RNA-Seq PHF20-RPN2 PHF20 chr20 34528969 + RPN2 chr20 35812583 + Exonic hg19 BRCA TCGA-A8-A079-01A 28 90 In-Frame Intra-chr q11.22 Transcription factor q11.23 Seq+ 23978 ChimerSeq STARFusion TCGA_RNA-Seq MBTD1-MYO7A MBTD1 chr17 49294695 - MYO7A chr11 76903096 + Exonic hg19 BRCA TCGA-A8-A079-01A 28 47 In-Frame Inter-chr q21.33 q13.5 Seq+ 23979 ChimerSeq STARFusion TCGA_RNA-Seq INTS4-C11orf30 INTS4 chr11 77612467 - C11orf30 chr11 76253260 + Exonic hg19 BRCA TCGA-A8-A079-01A 12 35 Out-of-frame Intra-chr q14.1 Seq+ 23980 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-SLCO2B1 RNA45S5 chrUn_gl000220 106452 + SLCO2B1 chr11 74904263 + Exonic hg19 BRCA TCGA-A8-A079-01A 14 26 Out-of-frame Inter-chr q13.4 23981 ChimerSeq STARFusion TCGA_RNA-Seq GALNT2-KIF26B GALNT2 chr1 230339036 + KIF26B chr1 245847535 + Exonic hg19 BRCA TCGA-A8-A079-01A 8 22 In-Frame Intra-chr q42.13 Seq+ 23982 ChimerSeq STARFusion TCGA_RNA-Seq GSS-ACSS2 GSS chr20 33517204 - ACSS2 chr20 33511126 + Exonic hg19 BRCA TCGA-A8-A079-01A 5 30 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 23983 ChimerSeq STARFusion TCGA_RNA-Seq SMEK1-FBXO34 SMEK1 chr14 91975850 - FBXO34 chr14 55817099 + Exonic hg19 BRCA TCGA-A8-A079-01A 7 21 CDS-5'UTR Intra-chr q22.3 Seq+ 23984 ChimerSeq STARFusion TCGA_RNA-Seq TRPC4AP-PPFIA1 TRPC4AP chr20 33657099 - PPFIA1 chr11 70118279 + Exonic hg19 BRCA TCGA-A8-A079-01A 6 10 CDS-5'UTR Inter-chr q11.22 q13.3 Seq+ 23985 ChimerSeq STARFusion TCGA_RNA-Seq INTS4-SLCO2B1 INTS4 chr11 77612467 - SLCO2B1 chr11 74873700 + Exonic hg19 BRCA TCGA-A8-A079-01A 3 4 Out-of-frame Intra-chr q14.1 q13.4 Seq+ 23986 ChimerSeq STARFusion TCGA_RNA-Seq PELI1-ACTG2 PELI1 chr2 64331835 - ACTG2 chr2 74128403 + Exonic hg19 BRCA TCGA-A8-A079-01A 3 3 CDS-5'UTR Intra-chr p14 p13.1 Seq+ 23987 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0146-RGS20 KIAA0146 chr8 48206619 + RGS20 chr8 54866636 + Exonic hg19 BRCA TCGA-A8-A079-01A 3 2 Out-of-frame Intra-chr q11.23 23988 ChimerSeq STARFusion TCGA_RNA-Seq SLCO2B1-CEP128 SLCO2B1 chr11 74876994 + CEP128 chr14 81366373 - Exonic hg19 BRCA TCGA-A8-A079-01A 2 3 Out-of-frame Inter-chr q13.4 q31.1 Seq+ 23989 ChimerSeq STARFusion TCGA_RNA-Seq CLNS1A-CBX8 CLNS1A chr11 77340808 - CBX8 chr17 77770114 - Exonic hg19 BRCA TCGA-A8-A079-01A 2 1 Out-of-frame Inter-chr q14.1 q25.3 23990 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-NECAB1 TPD52 chr8 81083660 - NECAB1 chr8 91813919 + Exonic hg19 BRCA TCGA-A8-A079-01A 2 1 Out-of-frame Intra-chr q21.13 q21.3 Seq+ 23991 ChimerSeq STARFusion TCGA_RNA-Seq TSKU-UBC TSKU chr11 76494448 + UBC chr12 125398320 - Exonic hg19 BRCA TCGA-A8-A079-01A 2 1 5'UTR-5'UTR Inter-chr q13.5 q24.31 23992 ChimerSeq STARFusion TCGA_RNA-Seq ELP2-MAPRE2 ELP2 chr18 33734962 + MAPRE2 chr18 32681910 + Exonic hg19 BRCA TCGA-A2-A0D2-01A 59 198 In-Frame Intra-chr q12.2 q12.1 Seq+ 23993 ChimerSeq STARFusion TCGA_RNA-Seq AFAP1-ABLIM2 AFAP1 chr4 7776466 - ABLIM2 chr4 7994654 - Exonic hg19 BRCA TCGA-A2-A0D2-01A 61 138 In-Frame Intra-chr p16.1 p16.1 Seq+ 23994 ChimerSeq STARFusion TCGA_RNA-Seq LMBR1-PTPRN2 LMBR1 chr7 156589083 - PTPRN2 chr7 157341713 - Exonic hg19 BRCA TCGA-A2-A0D2-01A 42 147 Out-of-frame Intra-chr q36.3 q36.3 Seq+ 23995 ChimerSeq STARFusion TCGA_RNA-Seq LNPEP-CAST LNPEP chr5 96271878 + CAST chr5 96011243 + Exonic hg19 BRCA TCGA-A2-A0D2-01A 22 33 Out-of-frame Intra-chr q15 q15 Seq+ 23996 ChimerSeq STARFusion TCGA_RNA-Seq STK40-MDM4 STK40 chr1 36806700 - MDM4 chr1 204525776 + Exonic hg19 BRCA TCGA-A2-A0D2-01A 12 35 Out-of-frame Intra-chr p34.3 q32.1 Oncogene Seq+ 23997 ChimerSeq STARFusion TCGA_RNA-Seq RPS15A-ARL6IP1 RPS15A chr16 18796060 - ARL6IP1 chr16 18810156 - Exonic hg19 BRCA TCGA-A2-A0D2-01A 5 31 Out-of-frame Intra-chr p12.3 p12.3 Seq+ 23998 ChimerSeq STARFusion TCGA_RNA-Seq STAT3-PTRF STAT3 chr17 40540297 - PTRF chr17 40557406 - Exonic hg19 BRCA TCGA-A2-A0D2-01A 6 25 5'UTR-CDS Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor 23999 ChimerSeq STARFusion TCGA_RNA-Seq TCF25-SPIRE2 TCF25 chr16 89940267 + SPIRE2 chr16 89934597 + Exonic hg19 BRCA TCGA-A2-A0D2-01A 9 11 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 24000 ChimerSeq STARFusion TCGA_RNA-Seq SPSB3-MEIOB SPSB3 chr16 1831359 - MEIOB chr16 1912117 - Exonic hg19 BRCA TCGA-A2-A0D2-01A 3 29 Out-of-frame Intra-chr p13.3 Seq+ 24001 ChimerSeq STARFusion TCGA_RNA-Seq SPSB3-MEIOB SPSB3 chr16 1831359 - MEIOB chr16 1915836 - Exonic hg19 BRCA TCGA-A2-A0D2-01A 2 29 Out-of-frame Intra-chr p13.3 Seq+ 24002 ChimerSeq STARFusion TCGA_RNA-Seq REV3L-FYN REV3L chr6 111701185 - FYN chr6 112101838 - Exonic hg19 BRCA TCGA-A2-A0D2-01A 3 14 CDS-5'UTR Intra-chr q21 q21 TK:Src Seq+ 24003 ChimerSeq STARFusion TCGA_RNA-Seq TCF25-SPIRE2 TCF25 chr16 89940267 + SPIRE2 chr16 89935975 + Exonic hg19 BRCA TCGA-A2-A0D2-01A 3 11 In-Frame Intra-chr q24.3 q24.3 Seq+ 24004 ChimerSeq STARFusion TCGA_RNA-Seq TMTC4-FGF14 TMTC4 chr13 101277789 - FGF14 chr13 102527646 - Exonic hg19 BRCA TCGA-A2-A0D2-01A 3 5 Out-of-frame Intra-chr q32.3 q33.1 Seq+ 24005 ChimerSeq STARFusion TCGA_RNA-Seq XXYLT1-ACAP2 XXYLT1 chr3 194877178 - ACAP2 chr3 195112876 - Exonic hg19 BRCA TCGA-A2-A0D2-01A 3 2 In-Frame Intra-chr q29 q29 Seq+ 24006 ChimerSeq STARFusion TCGA_RNA-Seq DENND5A-TMEM41B DENND5A chr11 9286508 - TMEM41B chr11 9321248 - Exonic hg19 BRCA TCGA-A2-A0D2-01A 3 1 In-Frame Intra-chr p15.4 p15.4 24007 ChimerSeq STARFusion TCGA_RNA-Seq TUBGCP3-FARP1 TUBGCP3 chr13 113200013 - FARP1 chr13 99098352 + Exonic hg19 BRCA TCGA-GM-A2DF-01A 15 63 In-Frame Intra-chr q32.2 Seq+ 24008 ChimerSeq STARFusion TCGA_RNA-Seq WAC-UBAC2 WAC chr10 28872434 + UBAC2 chr13 99966351 + Exonic hg19 BRCA TCGA-GM-A2DF-01A 12 42 Out-of-frame Inter-chr p12.1 q32.3 Seq+ 24009 ChimerSeq STARFusion TCGA_RNA-Seq GOLGA4-HSPA8 GOLGA4 chr3 37292975 + HSPA8 chr11 122930976 - Exonic hg19 BRCA TCGA-GM-A2DF-01A 7 22 In-Frame Inter-chr p22.2 q24.1 Seq+ 24010 ChimerSeq STARFusion TCGA_RNA-Seq TMBIM4-GRIP1 TMBIM4 chr12 66563635 - GRIP1 chr12 66839288 - Exonic hg19 BRCA TCGA-GM-A2DF-01A 3 10 In-Frame Intra-chr q14.3 q14.3 Seq+ 24011 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-C11orf83 FCHSD2 chr11 72851076 - C11orf83 chr11 62439425 + Exonic hg19 BRCA TCGA-GM-A2DF-01A 2 5 Out-of-frame Intra-chr q13.4 Seq+ 24012 ChimerSeq STARFusion TCGA_RNA-Seq TCF3-OAZ1 TCF3 chr19 1646354 - OAZ1 chr19 2271384 + Exonic hg19 BRCA TCGA-GM-A2DF-01A 3 1 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p13.3 24013 ChimerSeq STARFusion TCGA_RNA-Seq KDM5C-HSD17B10 KDM5C chrX 53246325 - HSD17B10 chrX 53459359 - Exonic hg19 BRCA TCGA-GM-A2DF-01A 2 3 In-Frame Intra-chr p11.22 Oncogene p11.22 Seq+ 24014 ChimerSeq STARFusion TCGA_RNA-Seq PCNT-MCOLN1 PCNT chr21 47811291 + MCOLN1 chr19 7598409 + Exonic hg19 BRCA TCGA-B6-A402-01A 10 21 Out-of-frame Inter-chr q22.3 p13.2 Seq+ 24015 ChimerSeq STARFusion TCGA_RNA-Seq SUCO-DNM3 SUCO chr1 172560211 + DNM3 chr1 172348158 + Exonic hg19 BRCA TCGA-A8-A07U-01A 16 54 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 24016 ChimerSeq STARFusion TCGA_RNA-Seq MFSD1-GFM1 MFSD1 chr3 158545126 + GFM1 chr3 158399784 + Exonic hg19 BRCA TCGA-A8-A07U-01A 6 19 In-Frame Intra-chr q25.32 q25.32 Seq+ 24017 ChimerSeq STARFusion TCGA_RNA-Seq PPTC7-ALS2CR12 PPTC7 chr12 111020614 - ALS2CR12 chr2 202195245 - Exonic hg19 BRCA TCGA-A8-A07U-01A 3 23 In-Frame Inter-chr q24.11 q33.1 Seq+ 24018 ChimerSeq STARFusion TCGA_RNA-Seq GIGYF2-EFHD1 GIGYF2 chr2 233599948 + EFHD1 chr2 233527512 + Exonic hg19 BRCA TCGA-A8-A07U-01A 3 9 In-Frame Intra-chr q37.1 q37.1 Seq+ 24019 ChimerSeq STARFusion TCGA_RNA-Seq SCUBE3-ANKS1A SCUBE3 chr6 35196516 + ANKS1A chr6 35050468 + Exonic hg19 BRCA TCGA-A8-A07U-01A 2 13 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 24020 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R3C-NFKBIA PPP2R3C chr14 35557157 - NFKBIA chr14 35871266 - Exonic hg19 BRCA TCGA-A8-A07U-01A 2 4 In-Frame Intra-chr q13.2 q13.2 Seq+ 24021 ChimerSeq STARFusion TCGA_RNA-Seq PLA2R1-ITGB6 PLA2R1 chr2 160884729 - ITGB6 chr2 160968710 - Exonic hg19 BRCA TCGA-A8-A07U-01A 2 0 In-Frame Intra-chr q24.2 Tumor suppressor gene q24.2 Seq+ 24022 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-FOLR1 CTTN chr11 70244720 + FOLR1 chr11 71900709 + Exonic hg19 BRCA TCGA-E9-A228-01A 439 852 5'UTR-5'UTR Intra-chr q13.3 q13.4 Seq+ 24023 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-FOLR1 CTTN chr11 70244720 + FOLR1 chr11 71903210 + Exonic hg19 BRCA TCGA-E9-A228-01A 311 852 5'UTR-5'UTR Intra-chr q13.3 q13.4 Seq+ 24024 ChimerSeq STARFusion TCGA_RNA-Seq LRTOMT-FOLR1 LRTOMT chr11 71791931 + FOLR1 chr11 71900709 + Exonic hg19 BRCA TCGA-E9-A228-01A 125 220 5'UTR-5'UTR Intra-chr q13.4 q13.4 Seq+ 24025 ChimerSeq STARFusion TCGA_RNA-Seq PGAP1-SPAG16 PGAP1 chr2 197781142 - SPAG16 chr2 215274864 + Exonic hg19 BRCA TCGA-E9-A228-01A 34 175 Out-of-frame Intra-chr q33.1 q34 Seq+ 24026 ChimerSeq STARFusion TCGA_RNA-Seq MSI2-TEX2 MSI2 chr17 55339553 + TEX2 chr17 62291602 - Exonic hg19 BRCA TCGA-E9-A228-01A 18 41 CDS-5'UTR Intra-chr q22 q23.3 Seq+ 24027 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-FLOT2 TAOK1 chr17 27718042 + FLOT2 chr17 27216044 - Exonic hg19 BRCA TCGA-E9-A228-01A 15 42 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 24028 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-PSMD11 WIPF2 chr17 38430251 + PSMD11 chr17 30806269 + Exonic hg19 BRCA TCGA-E9-A228-01A 5 57 Out-of-frame Intra-chr q21.2 q11.2 Seq+ 24029 ChimerSeq STARFusion TCGA_RNA-Seq ANO1-UNC5D ANO1 chr11 70017145 + UNC5D chr8 35406810 + Exonic hg19 BRCA TCGA-E9-A228-01A 11 19 In-Frame Inter-chr q13.3 p12 Tumor suppressor gene Seq+ 24030 ChimerSeq STARFusion TCGA_RNA-Seq CASC3-MED1 CASC3 chr17 38297860 + MED1 chr17 37584043 - Exonic hg19 BRCA TCGA-E9-A228-01A 8 31 Out-of-frame Intra-chr q21.1 q12 Tumor suppressor gene Seq+ 24031 ChimerSeq STARFusion TCGA_RNA-Seq KAT6B-DDX4 KAT6B chr10 76748870 + DDX4 chr5 55034778 + Exonic hg19 BRCA TCGA-E9-A228-01A 10 14 CDS-5'UTR Inter-chr Oncogene q11.2 Seq+ 24032 ChimerSeq STARFusion TCGA_RNA-Seq MFSD6-GLS MFSD6 chr2 191302287 + GLS chr2 191759878 + Exonic hg19 BRCA TCGA-E9-A228-01A 5 31 In-Frame Intra-chr q32.2 q32.2 Tumor suppressor gene Seq+ 24033 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-ANO1 CTTN chr11 70269101 + ANO1 chr11 70013348 + Exonic hg19 BRCA TCGA-E9-A228-01A 6 25 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 24034 ChimerSeq STARFusion TCGA_RNA-Seq HNF1B-CASC3 HNF1B chr17 36047020 - CASC3 chr17 38296774 + Exonic hg19 BRCA TCGA-E9-A228-01A 8 6 Out-of-frame Intra-chr q12 Transcription factor q21.1 Seq+ 24035 ChimerSeq STARFusion TCGA_RNA-Seq TSKU-ACER3 TSKU chr11 76494448 + ACER3 chr11 76637601 + Exonic hg19 BRCA TCGA-E9-A228-01A 7 8 5'UTR-CDS Intra-chr q13.5 q13.5 24036 ChimerSeq STARFusion TCGA_RNA-Seq CMC1-AZI2 CMC1 chr3 28361116 + AZI2 chr3 28373918 - Exonic hg19 BRCA TCGA-E9-A228-01A 3 14 Out-of-frame Intra-chr p24.1 p24.1 Seq+ 24037 ChimerSeq STARFusion TCGA_RNA-Seq CDC27-USP32 CDC27 chr17 45234596 - USP32 chr17 58379065 - Exonic hg19 BRCA TCGA-E9-A228-01A 2 17 In-Frame Intra-chr q21.32 q23.2 Seq+ 24038 ChimerSeq STARFusion TCGA_RNA-Seq CWC25-MED24 CWC25 chr17 36977154 - MED24 chr17 38209888 - Exonic hg19 BRCA TCGA-E9-A228-01A 3 13 CDS-5'UTR Intra-chr q12 q21.1 Seq+ 24039 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-LRTOMT CTTN chr11 70244720 + LRTOMT chr11 71791658 + Exonic hg19 BRCA TCGA-E9-A228-01A 4 2 5'UTR-5'UTR Intra-chr q13.3 q13.4 24040 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 BRCA TCGA-E9-A228-01A 3 4 CDS-5'UTR Intra-chr p12 p12 Transcription factor 24041 ChimerSeq STARFusion TCGA_RNA-Seq TMED3-KIAA1024 TMED3 chr15 79606347 + KIAA1024 chr15 79748440 + Exonic hg19 BRCA TCGA-E9-A228-01A 2 2 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 24042 ChimerSeq STARFusion TCGA_RNA-Seq GLRB-KLHL2 GLRB chr4 157999298 + KLHL2 chr4 166149959 + Exonic hg19 BRCA TCGA-E9-A228-01A 2 0 In-Frame Intra-chr q32.1 q32.3 24043 ChimerSeq STARFusion TCGA_RNA-Seq PHKG2-ELAVL1 PHKG2 chr16 30764878 + ELAVL1 chr19 8032674 - Exonic hg19 BRCA TCGA-E9-A228-01A 2 0 In-Frame Inter-chr p11.2 p13.2 24044 ChimerSeq STARFusion TCGA_RNA-Seq LRCH3-MED12L LRCH3 chr3 197544173 + MED12L chr3 150834125 + Exonic hg19 BRCA TCGA-AO-A0JA-01A 2 6 In-Frame Intra-chr q29 q25.1 Seq+ 24045 ChimerSeq STARFusion TCGA_RNA-Seq GPR98-ATR GPR98 chr5 89924649 + ATR chr3 142286996 - Exonic hg19 BRCA TCGA-AO-A0JA-01A 2 2 CDS-3'UTR Inter-chr q23 Atypical:PIKK Oncogene Tumor suppressor gene Seq+ 24046 ChimerSeq STARFusion TCGA_RNA-Seq CLASP2-UBP1 CLASP2 chr3 33648083 - UBP1 chr3 33467233 - Exonic hg19 BRCA TCGA-AO-A0JA-01A 2 1 In-Frame Intra-chr p22.3 p22.3 Transcription factor 24047 ChimerSeq STARFusion TCGA_RNA-Seq FSIP1-GPR176 FSIP1 chr15 39893046 - GPR176 chr15 40099459 - Exonic hg19 BRCA TCGA-BH-A0HX-01A 10 61 3'UTR-CDS Intra-chr q14 q15.1 Seq+ 24048 ChimerSeq STARFusion TCGA_RNA-Seq PCGF3-PIGG PCGF3 chr4 724899 + PIGG chr4 532942 + Exonic hg19 BRCA TCGA-BH-A0HX-01A 3 6 5'UTR-CDS Intra-chr p16.3 p16.3 Seq+ 24049 ChimerSeq STARFusion TCGA_RNA-Seq LAMA3-RIOK3 LAMA3 chr18 21513899 + RIOK3 chr18 21056970 + Exonic hg19 BRCA TCGA-BH-A0HX-01A 4 0 In-Frame Intra-chr q11.2 q11.2 Atypical:RIO 24050 ChimerSeq STARFusion TCGA_RNA-Seq FKBP9-CEP72 FKBP9 chr7 33028264 + CEP72 chr5 635487 + Exonic hg19 BRCA TCGA-BH-A0HX-01A 3 0 In-Frame Inter-chr p14.3 24051 ChimerSeq STARFusion TCGA_RNA-Seq BIRC6-RMDN2 BIRC6 chr2 32823035 + RMDN2 chr2 38294125 + Exonic hg19 BRCA TCGA-LL-A7SZ-01A 10 38 Out-of-frame Intra-chr p22.3 p22.2 Seq+ 24052 ChimerSeq STARFusion TCGA_RNA-Seq HCP5-TMEM232 HCP5 chr6 31368540 + TMEM232 chr5 109625141 - Exonic hg19 BRCA TCGA-LL-A7SZ-01A 11 31 Out-of-frame Inter-chr p21.33 q22.1 Seq+ 24053 ChimerSeq STARFusion TCGA_RNA-Seq MICA-TMEM232 MICA chr6 31371479 + TMEM232 chr5 109625141 - Exonic hg19 BRCA TCGA-LL-A7SZ-01A 7 40 CDS-3'UTR Inter-chr p21.33 q22.1 Seq+ 24054 ChimerSeq STARFusion TCGA_RNA-Seq HCP5-TMEM232 HCP5 chr6 31368558 + TMEM232 chr5 109625143 - Exonic hg19 BRCA TCGA-LL-A7SZ-01A 9 31 Out-of-frame Inter-chr p21.33 q22.1 Seq+ 24055 ChimerSeq STARFusion TCGA_RNA-Seq HCP5-TMEM232 HCP5 chr6 31368540 + TMEM232 chr5 109644459 - Exonic hg19 BRCA TCGA-LL-A7SZ-01A 3 31 Out-of-frame Inter-chr p21.33 q22.1 Seq+ 24056 ChimerSeq STARFusion TCGA_RNA-Seq VAPB-CDH12 VAPB chr20 57009761 + CDH12 chr5 21802529 - Exonic hg19 BRCA TCGA-LL-A7SZ-01A 2 8 In-Frame Inter-chr q13.32 p14.3 Seq+ 24057 ChimerSeq STARFusion TCGA_RNA-Seq BIRC6-ABCC11 BIRC6 chr2 32738221 + ABCC11 chr16 48211024 - Exonic hg19 BRCA TCGA-LL-A7SZ-01A 2 7 Out-of-frame Inter-chr p22.3 q12.1 Seq+ 24058 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-RAB3IP CPSF6 chr12 69633486 + RAB3IP chr12 70193989 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 85 210 In-Frame Intra-chr q15 q15 Seq+ 24059 ChimerSeq STARFusion TCGA_RNA-Seq TRIO-MARCH11 TRIO chr5 14488369 + 2019_ 3_ 11_ chr5 16091190 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 76 242 Out-of-frame Intra-chr p15.2 p15.1 Seq+ 24060 ChimerSeq STARFusion TCGA_RNA-Seq CPNE1-LPO CPNE1 chr20 34252682 - LPO chr17 56344710 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 98 119 5'UTR-5'UTR Inter-chr q11.22 q22 Seq+ 24061 ChimerSeq STARFusion TCGA_RNA-Seq RBM12-LPO RBM12 chr20 34252682 - LPO chr17 56344710 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 98 119 5'UTR-5'UTR Inter-chr q11.22 q22 Seq+ 24062 ChimerSeq STARFusion TCGA_RNA-Seq IL12RB2-DAB1 IL12RB2 chr1 67845806 + DAB1 chr1 57611102 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 35 179 In-Frame Intra-chr p31.3 p32.1 Seq+ 24063 ChimerSeq STARFusion TCGA_RNA-Seq MCM6-DARS MCM6 chr2 136622583 - DARS chr2 136664977 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 42 111 In-Frame Intra-chr q21.3 q21.3 Seq+ 24064 ChimerSeq STARFusion TCGA_RNA-Seq WNK1-PIP4K2C WNK1 chr12 966415 + PIP4K2C chr12 57995309 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 30 142 Out-of-frame Intra-chr p13.33 q13.3 Seq+ 24065 ChimerSeq STARFusion TCGA_RNA-Seq LEMD3-LYZ LEMD3 chr12 65564898 + LYZ chr12 69743888 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 31 107 In-Frame Intra-chr q14.3 q15 Seq+ 24066 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-XPOT MDM2 chr12 69222711 + XPOT chr12 64833024 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 22 98 In-Frame Intra-chr q15 Oncogene q14.2 Seq+ 24067 ChimerSeq STARFusion TCGA_RNA-Seq CPNE1-LPO CPNE1 chr20 34252724 - LPO chr17 56344710 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 12 119 5'UTR-5'UTR Inter-chr q11.22 q22 Seq+ 24068 ChimerSeq STARFusion TCGA_RNA-Seq RBM12-LPO RBM12 chr20 34252724 - LPO chr17 56344710 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 12 119 5'UTR-5'UTR Inter-chr q11.22 q22 Seq+ 24069 ChimerSeq STARFusion TCGA_RNA-Seq CPNE1-LPO CPNE1 chr20 34252682 - LPO chr17 56345148 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 11 119 5'UTR-5'UTR Inter-chr q11.22 q22 Seq+ 24070 ChimerSeq STARFusion TCGA_RNA-Seq RBM12-LPO RBM12 chr20 34252682 - LPO chr17 56345148 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 11 119 5'UTR-5'UTR Inter-chr q11.22 q22 Seq+ 24071 ChimerSeq STARFusion TCGA_RNA-Seq RHBDF2-JMJD6 RHBDF2 chr17 74483794 - JMJD6 chr17 74714942 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 22 60 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 24072 ChimerSeq STARFusion TCGA_RNA-Seq SNX1-FAM96A SNX1 chr15 64388371 + FAM96A chr15 64373350 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 21 53 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 24073 ChimerSeq STARFusion TCGA_RNA-Seq FAM96A-SNX1 FAM96A chr15 64380886 - SNX1 chr15 64404772 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 23 44 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 24074 ChimerSeq STARFusion TCGA_RNA-Seq ST6GALNAC2-JMJD6 ST6GALNAC2 chr17 74574838 - JMJD6 chr17 74716580 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 16 69 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 24075 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7B-RANGAP1 ZC3H7B chr22 41697776 + RANGAP1 chr22 41664160 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 15 60 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 24076 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT5-PTGIS B4GALT5 chr20 48330113 - PTGIS chr20 48166726 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 22 30 Out-of-frame Intra-chr q13.13 q13.13 Seq+ 24077 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-XPOT MDM2 chr12 69222711 + XPOT chr12 64838855 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 3 96 In-Frame Intra-chr q15 Oncogene q14.2 Seq+ 24078 ChimerSeq STARFusion TCGA_RNA-Seq RABEP1-NUP88 RABEP1 chr17 5185815 + NUP88 chr17 5308563 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 20 21 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 24079 ChimerSeq STARFusion TCGA_RNA-Seq CAND1-TUSC5 CAND1 chr12 67675833 + TUSC5 chr17 1198785 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 17 27 Out-of-frame Inter-chr q14.3 p13.3 Seq+ 24080 ChimerSeq STARFusion TCGA_RNA-Seq PHF20-DLGAP4 PHF20 chr20 34502119 + DLGAP4 chr20 35071130 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 12 35 Out-of-frame Intra-chr q11.22 Transcription factor q11.23 Seq+ 24081 ChimerSeq STARFusion TCGA_RNA-Seq SCML2-MAP7D2 SCML2 chrX 18323092 - MAP7D2 chrX 20082923 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 13 29 In-Frame Intra-chr p22.13 p22.12 Seq+ 24082 ChimerSeq STARFusion TCGA_RNA-Seq B3GNTL1-PPP1R27 B3GNTL1 chr17 81009613 - PPP1R27 chr17 79792709 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 12 11 Out-of-frame Intra-chr q25.3 Seq+ 24083 ChimerSeq STARFusion TCGA_RNA-Seq WNK1-KDM5A WNK1 chr12 939326 + KDM5A chr12 432947 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 10 17 In-Frame Intra-chr p13.33 p13.33 Tumor suppressor gene Seq+ 24084 ChimerSeq STARFusion TCGA_RNA-Seq TBCD-NFIX TBCD chr17 80899359 + NFIX chr19 13135835 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 8 23 In-Frame Inter-chr p13.13 Transcription factor Seq+ 24085 ChimerSeq STARFusion TCGA_RNA-Seq MBTPS2-EDEM2 MBTPS2 chrX 21896810 + EDEM2 chr20 33714178 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 7 13 In-Frame Inter-chr p22.12 q11.22 Seq+ 24086 ChimerSeq STARFusion TCGA_RNA-Seq MID1-PIR MID1 chrX 10851673 - PIR chrX 15509432 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 4 22 5'UTR-5'UTR Intra-chr p22.2 p22.2 Seq+ 24087 ChimerSeq STARFusion TCGA_RNA-Seq PPCDC-SCAMP2 PPCDC chr15 75320794 + SCAMP2 chr15 75146990 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 4 21 In-Frame Intra-chr q24.2 q24.1 Seq+ 24088 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD52-PGS1 ANKRD52 chr12 56645799 - PGS1 chr17 76411033 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 3 24 Out-of-frame Inter-chr q13.3 q25.3 Seq+ 24089 ChimerSeq STARFusion TCGA_RNA-Seq MID1-PIR MID1 chrX 10851673 - PIR chrX 15497944 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 3 21 5'UTR-CDS Intra-chr p22.2 p22.2 Seq+ 24090 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-SMG6 SEPT9 chr17 75478417 + SMG6 chr17 2091809 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 7 5 In-Frame Intra-chr p13.3 Seq+ 24091 ChimerSeq STARFusion TCGA_RNA-Seq RPAIN-LRRC27 RPAIN chr17 5324786 + LRRC27 chr10 134174961 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 3 18 In-Frame Inter-chr p13.2 q26.3 Seq+ 24092 ChimerSeq STARFusion TCGA_RNA-Seq PPCDC-SCAMP2 PPCDC chr15 75315967 + SCAMP2 chr15 75146990 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 2 21 5'UTR-CDS Intra-chr q24.2 q24.1 Seq+ 24093 ChimerSeq STARFusion TCGA_RNA-Seq RAB21-MDM1 RAB21 chr12 72164479 + MDM1 chr12 68696652 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 2 21 In-Frame Intra-chr q21.1 q15 Seq+ 24094 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-NRG3 FRS2 chr12 69925836 + NRG3 chr10 84498333 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 2 13 5'UTR-CDS Inter-chr q15 q23.1 Seq+ 24095 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-NRG3 FRS2 chr12 69925836 + NRG3 chr10 84625167 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 2 13 5'UTR-CDS Inter-chr q15 q23.1 Seq+ 24096 ChimerSeq STARFusion TCGA_RNA-Seq USP15-PKP4 USP15 chr12 62783768 + PKP4 chr2 159497139 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 3 7 In-Frame Inter-chr q14.1 q24.1 Seq+ 24097 ChimerSeq STARFusion TCGA_RNA-Seq B4GALNT3-SLCO4A1 B4GALNT3 chr12 666032 + SLCO4A1 chr20 61290029 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 3 6 In-Frame Inter-chr p13.33 q13.33 Seq+ 24098 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1244-TNNI3K KIAA1244 chr6 138483308 + TNNI3K chr1 74902158 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 2 10 In-Frame Inter-chr p31.1 24099 ChimerSeq STARFusion TCGA_RNA-Seq NMT2-ITGA8 NMT2 chr10 15170349 - ITGA8 chr10 15639298 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 2 9 In-Frame Intra-chr p13 p13 Seq+ 24100 ChimerSeq STARFusion TCGA_RNA-Seq SMG1-ARL6IP1 SMG1 chr16 18937272 - ARL6IP1 chr16 18806903 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 2 8 In-Frame Intra-chr p12.3 Atypical:PIKK p12.3 24101 ChimerSeq STARFusion TCGA_RNA-Seq DEAF1-PDDC1 DEAF1 chr11 674536 - PDDC1 chr11 775142 - Exonic hg19 BRCA TCGA-D8-A1JG-01B 5 32 Out-of-frame Intra-chr Transcription factor Seq+ 24102 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-TRAPPC9 AGO2 chr8 141595218 - TRAPPC9 chr8 141321473 - Exonic hg19 BRCA TCGA-D8-A1JG-01B 5 8 Out-of-frame Intra-chr q24.3 q24.3 24103 ChimerSeq STARFusion TCGA_RNA-Seq GATS-PILRB GATS chr7 99820220 - PILRB chr7 99952766 + Exonic hg19 BRCA TCGA-D8-A1JG-01B 2 2 3'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 24104 ChimerSeq STARFusion TCGA_RNA-Seq PLEC-FAM83H PLEC chr8 145002022 - FAM83H chr8 144812767 - Exonic hg19 BRCA TCGA-D8-A1JG-01B 2 1 CDS-5'UTR Intra-chr q24.3 24105 ChimerSeq STARFusion TCGA_RNA-Seq LINC00993-HMX2 LINC00993 chr10 37635758 + HMX2 chr10 124907895 + Exonic hg19 BRCA TCGA-E9-A295-01A 49 139 Out-of-frame Intra-chr p11.21 q26.13 Transcription factor 24106 ChimerSeq STARFusion TCGA_RNA-Seq ATP8A2P1-HMX2 ATP8A2P1 chr10 37635758 + HMX2 chr10 124907895 + Exonic hg19 BRCA TCGA-E9-A295-01A 25 48 Out-of-frame Intra-chr p11.21 q26.13 Transcription factor 24107 ChimerSeq STARFusion TCGA_RNA-Seq ZNF14-RGL3 ZNF14 chr19 19843765 - RGL3 chr19 11513382 - Exonic hg19 BRCA TCGA-E9-A295-01A 2 7 In-Frame Intra-chr p13.11 Transcription factor p13.2 Seq+ 24108 ChimerSeq STARFusion TCGA_RNA-Seq PACS1-RHOD PACS1 chr11 65961044 + RHOD chr11 66833367 + Exonic hg19 BRCA TCGA-A2-A0YI-01A 4 10 In-Frame Intra-chr q13.1 q13.2 Seq+ 24109 ChimerSeq STARFusion TCGA_RNA-Seq CPB1-NDUFA13 CPB1 chr3 148577617 + NDUFA13 chr19 19627032 + Exonic hg19 BRCA TCGA-A2-A0YI-01A 3 2 Out-of-frame Inter-chr q24 p13.11 24110 ChimerSeq STARFusion TCGA_RNA-Seq CLEC3A-SPTLC2 CLEC3A chr16 78056638 + SPTLC2 chr14 77987924 - Exonic hg19 BRCA TCGA-A2-A0YI-01A 2 0 In-Frame Inter-chr q23.1 q24.3 24111 ChimerSeq STARFusion TCGA_RNA-Seq COPS7A-PLEKHG6 COPS7A chr12 6838615 + PLEKHG6 chr12 6435594 + Exonic hg19 BRCA TCGA-A2-A0YI-01A 2 0 Out-of-frame Intra-chr p13.31 p13.31 24112 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF17-EP300 ARHGEF17 chr11 73022875 + EP300 chr22 41545042 + Exonic hg19 BRCA TCGA-BH-A0AU-01A 5 32 In-Frame Inter-chr q13.4 q13.2 Oncogene Seq+ 24113 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80954857 - MRPS28 chr8 80831385 - Exonic hg19 BRCA TCGA-BH-A0AU-01A 3 20 Out-of-frame Intra-chr q21.13 q21.13 24114 ChimerSeq STARFusion TCGA_RNA-Seq ALG14-NRD1 ALG14 chr1 95530422 - NRD1 chr1 52276076 - Exonic hg19 BRCA TCGA-BH-A0AU-01A 2 23 In-Frame Intra-chr p21.3 Seq+ 24115 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC9-LOC100616530 TRAPPC9 chr8 140998934 - LOC100616530 chr8 96622892 + Exonic hg19 BRCA TCGA-BH-A0AU-01A 4 14 CDS-5'UTR Intra-chr q24.3 24116 ChimerSeq STARFusion TCGA_RNA-Seq HIRA-CABIN1 HIRA chr22 19371143 - CABIN1 chr22 24560368 + Exonic hg19 BRCA TCGA-BH-A0AU-01A 2 12 Out-of-frame Intra-chr q11.21 Tumor suppressor gene Seq+ 24117 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 BRCA TCGA-BH-A0AU-01A 2 9 CDS-5'UTR Intra-chr p12 p12 Transcription factor 24118 ChimerSeq STARFusion TCGA_RNA-Seq PIGU-UQCC PIGU chr20 33203846 - UQCC chr20 33954417 - Exonic hg19 BRCA TCGA-BH-A0AU-01A 2 2 Out-of-frame Intra-chr q11.22 24119 ChimerSeq STARFusion TCGA_RNA-Seq IL6ST-ANKRD55 IL6ST chr5 55248078 - ANKRD55 chr5 55398413 - Exonic hg19 BRCA TCGA-BH-A0AU-01A 2 1 In-Frame Intra-chr q11.2 Oncogene q11.2 Seq+ 24120 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD1-WRN PCMTD1 chr8 52811490 - WRN chr8 30998946 + Exonic hg19 BRCA TCGA-A8-A07P-01A 18 51 5'UTR-CDS Intra-chr q11.23 p12 Oncogene Seq+ 24121 ChimerSeq STARFusion TCGA_RNA-Seq ZFP91-RAB6A ZFP91 chr11 58352357 + RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-A8-A07P-01A 17 39 Out-of-frame Intra-chr q12.1 Transcription factor q13.4 Seq+ 24122 ChimerSeq STARFusion TCGA_RNA-Seq USP22-MYH10 USP22 chr17 20919065 - MYH10 chr17 8508300 - Exonic hg19 BRCA TCGA-A8-A07P-01A 4 15 Out-of-frame Intra-chr p11.2 p13.1 Seq+ 24123 ChimerSeq STARFusion TCGA_RNA-Seq TMEM219-CHMP1A TMEM219 chr16 29982899 + CHMP1A chr16 89713739 - Exonic hg19 BRCA TCGA-A2-A0EN-01A 2 0 3'UTR-3'UTR Intra-chr p11.2 q24.3 24124 ChimerSeq STARFusion TCGA_RNA-Seq HARS-FAM53C HARS chr5 140070440 - FAM53C chr5 137676873 + Exonic hg19 BRCA TCGA-E9-A1RC-01A 9 28 CDS-5'UTR Intra-chr q31.3 q31.2 Seq+ 24125 ChimerSeq STARFusion TCGA_RNA-Seq HARS-FAM53C HARS chr5 140070440 - FAM53C chr5 137680514 + Exonic hg19 BRCA TCGA-E9-A1RC-01A 4 28 Out-of-frame Intra-chr q31.3 q31.2 Seq+ 24126 ChimerSeq STARFusion TCGA_RNA-Seq PLIN1-ACSL6 PLIN1 chr15 90212731 - ACSL6 chr5 131321151 - Exonic hg19 BRCA TCGA-E9-A1RC-01A 2 26 In-Frame Inter-chr q26.1 q31.1 Seq+ 24127 ChimerSeq STARFusion TCGA_RNA-Seq FSTL4-SIL1 FSTL4 chr5 132648346 - SIL1 chr5 138287573 - Exonic hg19 BRCA TCGA-E9-A1RC-01A 2 2 Out-of-frame Intra-chr q31.1 q31.2 Seq+ 24128 ChimerSeq STARFusion TCGA_RNA-Seq YWHAB-ARHGAP32 YWHAB chr20 43514527 + ARHGAP32 chr11 128963602 - Exonic hg19 BRCA TCGA-D8-A1XO-01A 4 18 5'UTR-CDS Inter-chr q13.12 q24.3 Seq+ 24129 ChimerSeq STARFusion TCGA_RNA-Seq RGS12-THY1 RGS12 chr4 3344780 + THY1 chr11 119291639 - Exonic hg19 BRCA TCGA-D8-A1XO-01A 4 15 CDS-5'UTR Inter-chr p16.3 q23.3 Tumor suppressor gene Seq+ 24130 ChimerSeq STARFusion TCGA_RNA-Seq AKAP1-PITPNC1 AKAP1 chr17 55162759 + PITPNC1 chr17 65574302 + Exonic hg19 BRCA TCGA-E2-A14V-01A 379 259 5'UTR-CDS Intra-chr q22 q24.2 Seq+ 24131 ChimerSeq STARFusion TCGA_RNA-Seq PPM1D-TRIM37 PPM1D chr17 58711338 + TRIM37 chr17 57060282 - Exonic hg19 BRCA TCGA-E2-A14V-01A 94 276 Out-of-frame Intra-chr q23.2 q22 Seq+ 24132 ChimerSeq STARFusion TCGA_RNA-Seq SYNCRIP-CDK19 SYNCRIP chr6 86352515 - CDK19 chr6 111067404 - Exonic hg19 BRCA TCGA-E2-A14V-01A 36 208 5'UTR-CDS Intra-chr q14.3 q21 Seq+ 24133 ChimerSeq STARFusion TCGA_RNA-Seq SYNCRIP-CDK19 SYNCRIP chr6 86352515 - CDK19 chr6 111095140 - Exonic hg19 BRCA TCGA-E2-A14V-01A 20 201 5'UTR-CDS Intra-chr q14.3 q21 Seq+ 24134 ChimerSeq STARFusion TCGA_RNA-Seq RNFT1-PAAF1 RNFT1 chr17 58041969 - PAAF1 chr11 73589824 + Exonic hg19 BRCA TCGA-E2-A14V-01A 21 66 In-Frame Inter-chr q23.1 q13.4 Seq+ 24135 ChimerSeq STARFusion TCGA_RNA-Seq SNAPC5-BPIFB4 SNAPC5 chr15 66789980 - BPIFB4 chr20 31692616 + Exonic hg19 BRCA TCGA-E2-A14V-01A 17 67 In-Frame Inter-chr q22.31 Transcription factor q11.21 Seq+ 24136 ChimerSeq STARFusion TCGA_RNA-Seq PTRH2-MRGPRD PTRH2 chr17 57784732 - MRGPRD chr11 68748457 - Exonic hg19 BRCA TCGA-E2-A14V-01A 22 5 5'UTR-5'UTR Inter-chr q23.1 q13.3 Seq+ 24137 ChimerSeq STARFusion TCGA_RNA-Seq RNFT1-PAAF1 RNFT1 chr17 58041969 - PAAF1 chr11 73598399 + Exonic hg19 BRCA TCGA-E2-A14V-01A 4 65 Out-of-frame Inter-chr q23.1 q13.4 Seq+ 24138 ChimerSeq STARFusion TCGA_RNA-Seq SNAPC5-BPIFB4 SNAPC5 chr15 66789828 - BPIFB4 chr20 31692616 + Exonic hg19 BRCA TCGA-E2-A14V-01A 3 67 Out-of-frame Inter-chr q22.31 Transcription factor q11.21 Seq+ 24139 ChimerSeq STARFusion TCGA_RNA-Seq PREP-LDLRAD4 PREP chr6 105845728 - LDLRAD4 chr18 13621116 + Exonic hg19 BRCA TCGA-E2-A14V-01A 10 11 Out-of-frame Inter-chr q21 p11.21 Seq+ 24140 ChimerSeq STARFusion TCGA_RNA-Seq RBM14-MIR4523 RBM14 chr11 66384528 + MIR4523 chr17 27697323 - Exonic hg19 BRCA TCGA-E2-A14V-01A 6 24 CDS-5'UTR Inter-chr q13.2 Tumor suppressor gene q11.2 24141 ChimerSeq STARFusion TCGA_RNA-Seq RBM4-MIR4523 RBM4 chr11 66384528 + MIR4523 chr17 27697323 - Exonic hg19 BRCA TCGA-E2-A14V-01A 6 24 Out-of-frame Inter-chr q13.2 Tumor suppressor gene q11.2 24142 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-NARS2 SSH2 chr17 28088168 - NARS2 chr11 78154804 - Exonic hg19 BRCA TCGA-E2-A14V-01A 4 24 Out-of-frame Inter-chr q11.2 q14.1 Seq+ 24143 ChimerSeq STARFusion TCGA_RNA-Seq REV3L-LINC00222 REV3L chr6 111726673 - LINC00222 chr6 109080621 + Exonic hg19 BRCA TCGA-E2-A14V-01A 5 18 CDS-5'UTR Intra-chr q21 q21 24144 ChimerSeq STARFusion TCGA_RNA-Seq KSR1-MSI2 KSR1 chr17 25783900 + MSI2 chr17 55478740 + Exonic hg19 BRCA TCGA-E2-A14V-01A 4 17 5'UTR-CDS Intra-chr q11.2 TKL:RAF q22 Seq+ 24145 ChimerSeq STARFusion TCGA_RNA-Seq SNX14-COL21A1 SNX14 chr6 86281855 - COL21A1 chr6 55956381 - Exonic hg19 BRCA TCGA-E2-A14V-01A 5 9 Out-of-frame Intra-chr q14.3 p12.1 Seq+ 24146 ChimerSeq STARFusion TCGA_RNA-Seq AATF-RPL23A AATF chr17 35348156 + RPL23A chr17 27047725 + Exonic hg19 BRCA TCGA-E2-A14V-01A 2 11 Out-of-frame Intra-chr q11.2 24147 ChimerSeq STARFusion TCGA_RNA-Seq PPM1D-ATP5G1 PPM1D chr17 58740412 + ATP5G1 chr17 46970771 + Exonic hg19 BRCA TCGA-E2-A14V-01A 3 6 CDS-5'UTR Intra-chr q23.2 q21.32 Seq+ 24148 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-NUP107 MDM2 chr12 69233581 + NUP107 chr12 69113121 + Exonic hg19 BRCA TCGA-3C-AAAU-01A 12 98 In-Frame Intra-chr q15 Oncogene q15 Seq+ 24149 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-NUP107 MDM2 chr12 69229764 + NUP107 chr12 69113121 + Exonic hg19 BRCA TCGA-3C-AAAU-01A 11 98 In-Frame Intra-chr q15 Oncogene q15 Seq+ 24150 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-MS4A5 PPFIA1 chr11 70222706 + MS4A5 chr11 60215122 + Exonic hg19 BRCA TCGA-3C-AAAU-01A 20 48 In-Frame Intra-chr q13.3 q12.2 Seq+ 24151 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-NUP107 MDM2 chr12 69236158 + NUP107 chr12 69113121 + Exonic hg19 BRCA TCGA-3C-AAAU-01A 4 98 3'UTR-CDS Intra-chr q15 Oncogene q15 Seq+ 24152 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-NUP107 MDM2 chr12 69236278 + NUP107 chr12 69113121 + Exonic hg19 BRCA TCGA-3C-AAAU-01A 3 98 3'UTR-CDS Intra-chr q15 Oncogene q15 Seq+ 24153 ChimerSeq STARFusion TCGA_RNA-Seq GAB2-CHKA GAB2 chr11 78128692 - CHKA chr11 67821514 - Exonic hg19 BRCA TCGA-3C-AAAU-01A 10 38 In-Frame Intra-chr q14.1 q13.2 Seq+ 24154 ChimerSeq STARFusion TCGA_RNA-Seq GAB2-CHKA GAB2 chr11 78075062 - CHKA chr11 67821514 - Exonic hg19 BRCA TCGA-3C-AAAU-01A 6 38 5'UTR-CDS Intra-chr q14.1 q13.2 Seq+ 24155 ChimerSeq STARFusion TCGA_RNA-Seq CNOT2-SRGAP1 CNOT2 chr12 70713144 + SRGAP1 chr12 64377727 + Exonic hg19 BRCA TCGA-3C-AAAU-01A 3 18 In-Frame Intra-chr q15 q14.2 Seq+ 24156 ChimerSeq STARFusion TCGA_RNA-Seq RASSF6-LEMD3 RASSF6 chr4 74459168 - LEMD3 chr12 65639449 + Exonic hg19 BRCA TCGA-3C-AAAU-01A 3 10 In-Frame Inter-chr q13.3 q14.3 Seq+ 24157 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 BRCA TCGA-3C-AAAU-01A 5 1 In-Frame Intra-chr p11.21 p11.21 24158 ChimerSeq STARFusion TCGA_RNA-Seq DPY19L2-MRPL1 DPY19L2 chr12 64061837 - MRPL1 chr4 78870951 + Exonic hg19 BRCA TCGA-3C-AAAU-01A 2 9 Out-of-frame Inter-chr q14.2 q21.1 Seq+ 24159 ChimerSeq STARFusion TCGA_RNA-Seq DR1-FNBP1L DR1 chr1 93819628 + FNBP1L chr1 93965025 + Exonic hg19 BRCA TCGA-AR-A24P-01A 2 1 In-Frame Intra-chr p22.1 Transcription factor p22.1 24160 ChimerSeq STARFusion TCGA_RNA-Seq ZNF79-FAM129B ZNF79 chr9 130198282 + FAM129B chr9 130269710 - Exonic hg19 BRCA TCGA-AO-A12G-01A 65 234 In-Frame Intra-chr q33.3 Transcription factor q34.11 Seq+ 24161 ChimerSeq STARFusion TCGA_RNA-Seq ARID5B-ABLIM1 ARID5B chr10 63700167 + ABLIM1 chr10 116201545 - Exonic hg19 BRCA TCGA-AO-A12G-01A 18 43 In-Frame Intra-chr q21.2 Transcription factor q25.3 Seq+ 24162 ChimerSeq STARFusion TCGA_RNA-Seq ARAF-SRSF11 ARAF chrX 47420650 + SRSF11 chr1 70715635 + Exonic hg19 BRCA TCGA-AO-A12G-01A 2 0 5'UTR-CDS Inter-chr p11.3 TKL:RAF Oncogene p31.1 24163 ChimerSeq STARFusion TCGA_RNA-Seq TEX30-AQP5 TEX30 chr13 103426032 - AQP5 chr12 50357275 + Exonic hg19 BRCA TCGA-AO-A12G-01A 2 0 5'UTR-CDS Inter-chr q33.1 q13.12 24164 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-NSRP1 TAOK1 chr17 27718042 + NSRP1 chr17 28499560 + Exonic hg19 BRCA TCGA-E2-A1LB-01A 46 147 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 24165 ChimerSeq STARFusion TCGA_RNA-Seq RRP7A-SERHL2 RRP7A chr22 42905093 - SERHL2 chr22 42967168 + Exonic hg19 BRCA TCGA-E2-A1LB-01A 3 139 Out-of-frame Intra-chr q13.2 q13.2 24166 ChimerSeq STARFusion TCGA_RNA-Seq LUC7L3-IKZF3 LUC7L3 chr17 48797192 + IKZF3 chr17 37949186 - Exonic hg19 BRCA TCGA-E2-A1LB-01A 12 55 Out-of-frame Intra-chr q21.33 q21.1 Tumor suppressor gene Transcription factor Seq+ 24167 ChimerSeq STARFusion TCGA_RNA-Seq MYO1D-TMIGD1 MYO1D chr17 31203796 - TMIGD1 chr17 28656547 - Exonic hg19 BRCA TCGA-E2-A1LB-01A 7 49 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 24168 ChimerSeq STARFusion TCGA_RNA-Seq MYO1D-TMIGD1 MYO1D chr17 31203796 - TMIGD1 chr17 28659173 - Exonic hg19 BRCA TCGA-E2-A1LB-01A 3 49 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 24169 ChimerSeq STARFusion TCGA_RNA-Seq SERHL2-RRP7A SERHL2 chr22 42968458 + RRP7A chr22 42905116 - Exonic hg19 BRCA TCGA-E2-A1LB-01A 4 42 Out-of-frame Intra-chr q13.2 q13.2 24170 ChimerSeq STARFusion TCGA_RNA-Seq SERHL2-RRP7A SERHL2 chr22 42970141 + RRP7A chr22 42908307 - Exonic hg19 BRCA TCGA-E2-A1LB-01A 3 42 Out-of-frame Intra-chr q13.2 q13.2 24171 ChimerSeq STARFusion TCGA_RNA-Seq SERHL2-RRP7A SERHL2 chr22 42970001 + RRP7A chr22 42908165 - Exonic hg19 BRCA TCGA-E2-A1LB-01A 3 42 Out-of-frame Intra-chr q13.2 q13.2 24172 ChimerSeq STARFusion TCGA_RNA-Seq SERHL-RRP7B SERHL chr22 42908307 + RRP7B chr22 42970141 - Exonic hg19 BRCA TCGA-E2-A1LB-01A 3 35 Out-of-frame Intra-chr q13.2 24173 ChimerSeq STARFusion TCGA_RNA-Seq SERHL-RRP7B SERHL chr22 42908165 + RRP7B chr22 42970001 - Exonic hg19 BRCA TCGA-E2-A1LB-01A 3 35 Out-of-frame Intra-chr q13.2 24174 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PCTP RARA chr17 38474700 + PCTP chr17 53848467 + Exonic hg19 BRCA TCGA-A2-A0D4-01A 15 93 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 24175 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PCTP RARA chr17 38465538 + PCTP chr17 53848467 + Exonic hg19 BRCA TCGA-A2-A0D4-01A 5 93 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 24176 ChimerSeq STARFusion TCGA_RNA-Seq ELAVL1-HDGFRP2 ELAVL1 chr19 8056528 - HDGFRP2 chr19 4475272 + Exonic hg19 BRCA TCGA-A2-A0D4-01A 4 31 Out-of-frame Intra-chr p13.2 24177 ChimerSeq STARFusion TCGA_RNA-Seq TMEM135-AAMDC TMEM135 chr11 86802437 + AAMDC chr11 77553525 + Exonic hg19 BRCA TCGA-A2-A0D4-01A 4 28 Out-of-frame Intra-chr q14.2 q14.1 Seq+ 24178 ChimerSeq STARFusion TCGA_RNA-Seq NADSYN1-TRIM9 NADSYN1 chr11 71189515 + TRIM9 chr14 51492078 - Exonic hg19 BRCA TCGA-A2-A0D4-01A 5 7 In-Frame Inter-chr q13.4 q22.1 Seq+ 24179 ChimerSeq STARFusion TCGA_RNA-Seq LMBR1-PTPRN2 LMBR1 chr7 156516806 - PTPRN2 chr7 157997965 - Exonic hg19 BRCA TCGA-AR-A24K-01A 18 96 In-Frame Intra-chr q36.3 q36.3 Seq+ 24180 ChimerSeq STARFusion TCGA_RNA-Seq TOX3-ITFG1 TOX3 chr16 52479906 - ITFG1 chr16 47196575 - Exonic hg19 BRCA TCGA-AR-A24K-01A 6 32 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 24181 ChimerSeq STARFusion TCGA_RNA-Seq TOX3-ITFG1 TOX3 chr16 52479906 - ITFG1 chr16 47196512 - Exonic hg19 BRCA TCGA-AR-A24K-01A 2 32 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 24182 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA7-SMPD1 PLEKHA7 chr11 17035536 - SMPD1 chr11 6414446 + Exonic hg19 BRCA TCGA-AR-A24K-01A 6 9 In-Frame Intra-chr p15.1 p15.4 Seq+ 24183 ChimerSeq STARFusion TCGA_RNA-Seq B3GALTL-STK33 B3GALTL chr13 31789237 + STK33 chr11 8498830 - Exonic hg19 BRCA TCGA-AR-A24K-01A 5 10 CDS-5'UTR Inter-chr p15.4 CAMK:CAMK-Unique Seq+ 24184 ChimerSeq STARFusion TCGA_RNA-Seq CLPB-MTUS2 CLPB chr11 72069924 - MTUS2 chr13 29674910 + Exonic hg19 BRCA TCGA-AR-A24K-01A 4 13 In-Frame Inter-chr q13.4 q12.3 Seq+ 24185 ChimerSeq STARFusion TCGA_RNA-Seq B3GALTL-STK33 B3GALTL chr13 31789237 + STK33 chr11 8496613 - Exonic hg19 BRCA TCGA-AR-A24K-01A 3 10 CDS-5'UTR Inter-chr p15.4 CAMK:CAMK-Unique Seq+ 24186 ChimerSeq STARFusion TCGA_RNA-Seq SACM1L-ANAPC13 SACM1L chr3 45730989 + ANAPC13 chr3 134201773 - Exonic hg19 BRCA TCGA-BH-A18P-01A 43 44 CDS-5'UTR Intra-chr p21.31 q22.2 Seq+ 24187 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-MRPL38 SEPT9 chr17 75303282 + MRPL38 chr17 73895655 - Exonic hg19 BRCA TCGA-C8-A12V-01A 16 236 Out-of-frame Intra-chr q25.1 Seq+ 24188 ChimerSeq STARFusion TCGA_RNA-Seq ARID1A-THBS3 ARID1A chr1 27059283 + THBS3 chr1 155172928 - Exonic hg19 BRCA TCGA-C8-A12V-01A 24 66 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene q22 Seq+ 24189 ChimerSeq STARFusion TCGA_RNA-Seq PDHX-EIF3M PDHX chr11 34979130 + EIF3M chr11 32622235 + Exonic hg19 BRCA TCGA-C8-A12V-01A 7 18 Out-of-frame Intra-chr p13 p13 Seq+ 24190 ChimerSeq STARFusion TCGA_RNA-Seq TENC1-ACVR1B TENC1 chr12 53445747 + ACVR1B chr12 52378976 + Exonic hg19 BRCA TCGA-C8-A12V-01A 4 7 In-Frame Intra-chr q13.13 Oncogene Seq+ 24191 ChimerSeq STARFusion TCGA_RNA-Seq RIMS2-ODF1 RIMS2 chr8 104513290 + ODF1 chr8 103572680 + Exonic hg19 BRCA TCGA-E9-A22B-01A 32 76 In-Frame Intra-chr q22.3 q22.3 Seq+ 24192 ChimerSeq STARFusion TCGA_RNA-Seq AP1M1-OR7A15P AP1M1 chr19 16314389 + OR7A15P chr19 15037851 + Exonic hg19 BRCA TCGA-E9-A22B-01A 15 13 Out-of-frame Intra-chr p13.11 p13.12 24193 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM8-KNDC1 ZSWIM8 chr10 75560555 + KNDC1 chr10 135000156 + Exonic hg19 BRCA TCGA-E9-A22B-01A 4 7 Out-of-frame Intra-chr q22.2 q26.3 24194 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHS1-PDCD4 PLEKHS1 chr10 115529659 + PDCD4 chr10 112645011 + Exonic hg19 BRCA TCGA-BH-A42U-01A 2 1 Out-of-frame Intra-chr q25.3 q25.2 Tumor suppressor gene Seq+ 24195 ChimerSeq STARFusion TCGA_RNA-Seq RPRD1A-SLC39A6 RPRD1A chr18 33606863 - SLC39A6 chr18 33702233 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 744 2033 In-Frame Intra-chr q12.2 q12.2 Seq+ 24196 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-HECA PTPRK chr6 128841404 - HECA chr6 139487421 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 118 360 In-Frame Intra-chr Tumor suppressor gene q24.1 Tumor suppressor gene Seq+ 24197 ChimerSeq STARFusion TCGA_RNA-Seq WAC-APBB1IP WAC chr10 28872434 + APBB1IP chr10 26855890 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 24 49 In-Frame Intra-chr p12.1 p12.1 Seq+ 24198 ChimerSeq STARFusion TCGA_RNA-Seq GPNMB-NUPL2 GPNMB chr7 23293931 + NUPL2 chr7 23224689 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 16 76 In-Frame Intra-chr p15.3 p15.3 Seq+ 24199 ChimerSeq STARFusion TCGA_RNA-Seq RNH1-SCT RNH1 chr11 507113 - SCT chr11 626530 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 11 88 5'UTR-CDS Intra-chr Tumor suppressor gene Seq+ 24200 ChimerSeq STARFusion TCGA_RNA-Seq RNH1-SCT RNH1 chr11 507113 - SCT chr11 626989 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 11 88 5'UTR-CDS Intra-chr Tumor suppressor gene Seq+ 24201 ChimerSeq STARFusion TCGA_RNA-Seq DCP2-REEP5 DCP2 chr5 112312683 + REEP5 chr5 112256953 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 9 88 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 24202 ChimerSeq STARFusion TCGA_RNA-Seq VMP1-CLTC VMP1 chr17 57816308 + CLTC chr17 57721637 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 21 34 In-Frame Intra-chr q23.1 q23.1 Seq+ 24203 ChimerSeq STARFusion TCGA_RNA-Seq RNH1-SCT RNH1 chr11 506609 - SCT chr11 626989 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 6 88 5'UTR-CDS Intra-chr Tumor suppressor gene Seq+ 24204 ChimerSeq STARFusion TCGA_RNA-Seq DCP2-REEP5 DCP2 chr5 112312683 + REEP5 chr5 112238215 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 3 88 In-Frame Intra-chr q22.2 q22.2 Seq+ 24205 ChimerSeq STARFusion TCGA_RNA-Seq RNH1-SCT RNH1 chr11 504824 - SCT chr11 626989 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 3 88 5'UTR-CDS Intra-chr Tumor suppressor gene Seq+ 24206 ChimerSeq STARFusion TCGA_RNA-Seq RNH1-SCT RNH1 chr11 507113 - SCT chr11 626789 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 3 88 5'UTR-CDS Intra-chr Tumor suppressor gene Seq+ 24207 ChimerSeq STARFusion TCGA_RNA-Seq SLC37A1-PCP4 SLC37A1 chr21 43988548 + PCP4 chr21 41300909 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 12 37 In-Frame Intra-chr q22.3 q22.2 Seq+ 24208 ChimerSeq STARFusion TCGA_RNA-Seq WAC-APBB1IP WAC chr10 28872436 + APBB1IP chr10 26855885 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 9 49 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 24209 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-C6orf211 ESR1 chr6 152023140 + C6orf211 chr6 151785588 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 9 45 5'UTR-CDS Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor Seq+ 24210 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-IST1 NFAT5 chr16 69600277 + IST1 chr16 71961517 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 11 31 Out-of-frame Intra-chr q22.1 Transcription factor q22.2 Seq+ 24211 ChimerSeq STARFusion TCGA_RNA-Seq UHMK1-PPOX UHMK1 chr1 162487980 + PPOX chr1 161139450 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 8 42 In-Frame Intra-chr q23.3 q23.3 Seq+ 24212 ChimerSeq STARFusion TCGA_RNA-Seq UHMK1-PPOX UHMK1 chr1 162487980 + PPOX chr1 161140410 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 6 41 In-Frame Intra-chr q23.3 q23.3 Seq+ 24213 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHB2-FAM168B PLEKHB2 chr2 131862971 + FAM168B chr2 131840230 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 9 27 5'UTR-5'UTR Intra-chr q21.1 q21.1 Seq+ 24214 ChimerSeq STARFusion TCGA_RNA-Seq GIGYF2-DIS3L2 GIGYF2 chr2 233613792 + DIS3L2 chr2 232952197 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 6 33 In-Frame Intra-chr q37.1 q37.1 Seq+ 24215 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-WIPI1 BCAS3 chr17 58885437 + WIPI1 chr17 66432620 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 8 16 Out-of-frame Intra-chr q23.2 q24.2 Seq+ 24216 ChimerSeq STARFusion TCGA_RNA-Seq ZNF587B-TMEM150B ZNF587B chr19 58331917 + TMEM150B chr19 55834111 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 4 28 5'UTR-5'UTR Intra-chr q13.43 Transcription factor q13.42 Seq+ 24217 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB1-MTHFD1 ZBTB1 chr14 64990120 + MTHFD1 chr14 64894055 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 5 19 In-Frame Intra-chr q23.3 Transcription factor q23.3 Seq+ 24218 ChimerSeq STARFusion TCGA_RNA-Seq SKAP1-BCAS3 SKAP1 chr17 46423267 - BCAS3 chr17 58885365 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 8 5 In-Frame Intra-chr q21.32 q23.2 Seq+ 24219 ChimerSeq STARFusion TCGA_RNA-Seq ZNF587B-TMEM150B ZNF587B chr19 58331313 + TMEM150B chr19 55834111 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 2 28 5'UTR-5'UTR Intra-chr q13.43 Transcription factor q13.42 Seq+ 24220 ChimerSeq STARFusion TCGA_RNA-Seq MCL1-ARNT MCL1 chr1 150549844 - ARNT chr1 150790506 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 4 19 In-Frame Intra-chr q21.2 Oncogene q21.3 Oncogene Transcription factor Seq+ 24221 ChimerSeq STARFusion TCGA_RNA-Seq CDC27-DDX11L1 CDC27 chr17 45214518 - DDX11L1 chr1 12010 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 4 18 3'UTR-3'UTR Inter-chr q21.32 p36.33 24222 ChimerSeq STARFusion TCGA_RNA-Seq UBE2D3-SLC9B1 UBE2D3 chr4 103789872 - SLC9B1 chr4 103912869 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 7 6 5'UTR-5'UTR Intra-chr q24 q24 Seq+ 24223 ChimerSeq STARFusion TCGA_RNA-Seq ZNF587-BRSK1 ZNF587 chr19 58367601 + BRSK1 chr19 55817620 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 4 17 Out-of-frame Intra-chr q13.43 Transcription factor q13.42 CAMK:CAMKL Tumor suppressor gene Seq+ 24224 ChimerSeq STARFusion TCGA_RNA-Seq ZNF587B-BRSK1 ZNF587B chr19 58367601 + BRSK1 chr19 55817620 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 4 14 3'UTR-CDS Intra-chr q13.43 Transcription factor q13.42 CAMK:CAMKL Tumor suppressor gene 24225 ChimerSeq STARFusion TCGA_RNA-Seq HIST4H4-RERG HIST4H4 chr12 14923613 - RERG chr12 15274053 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 3 15 3'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 24226 ChimerSeq STARFusion TCGA_RNA-Seq MTF2-RPL5 MTF2 chr1 93545088 + RPL5 chr1 93298946 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 4 10 Out-of-frame Intra-chr p22.1 Transcription factor p22.1 Tumor suppressor gene Seq+ 24227 ChimerSeq STARFusion TCGA_RNA-Seq SRGAP1-TMEM5 SRGAP1 chr12 64238663 + TMEM5 chr12 64174799 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 3 9 In-Frame Intra-chr q14.2 q14.2 Seq+ 24228 ChimerSeq STARFusion TCGA_RNA-Seq SLFN12-PSMD3 SLFN12 chr17 33757519 - PSMD3 chr17 38151446 + Exonic hg19 BRCA TCGA-AR-A1AT-01A 72 141 Out-of-frame Intra-chr q12 q21.1 Seq+ 24229 ChimerSeq STARFusion TCGA_RNA-Seq C1orf132-GRIK3 C1orf132 chr1 208041271 - GRIK3 chr1 37356697 - Exonic hg19 BRCA TCGA-AR-A1AT-01A 5 24 Out-of-frame Intra-chr q32.2 p34.3 Seq+ 24230 ChimerSeq STARFusion TCGA_RNA-Seq CPD-ADAP2 CPD chr17 28712254 + ADAP2 chr17 29281496 + Exonic hg19 BRCA TCGA-AR-A1AT-01A 4 10 Out-of-frame Intra-chr q11.2 Tumor suppressor gene q11.2 Seq+ 24231 ChimerSeq STARFusion TCGA_RNA-Seq MAST2-CHIT1 MAST2 chr1 46348067 + CHIT1 chr1 203209786 - Exonic hg19 BRCA TCGA-AR-A1AT-01A 4 7 CDS-5'UTR Intra-chr p34.1 AGC:MAST q32.1 Seq+ 24232 ChimerSeq STARFusion TCGA_RNA-Seq CASC3-CCDC144CP CASC3 chr17 38325699 + CCDC144CP chr17 20227496 + Exonic hg19 BRCA TCGA-AR-A1AT-01A 2 14 Out-of-frame Intra-chr q21.1 p11.2 24233 ChimerSeq STARFusion TCGA_RNA-Seq HOOK3-TADA2A HOOK3 chr8 42873637 + TADA2A chr17 35830504 + Exonic hg19 BRCA TCGA-AR-A1AT-01A 2 11 Out-of-frame Inter-chr p11.21 Oncogene q12 Seq+ 24234 ChimerSeq STARFusion TCGA_RNA-Seq TCEA3-LOC100506963 TCEA3 chr1 23735157 - LOC100506963 chr1 24087641 - Exonic hg19 BRCA TCGA-A2-A3XU-01A 3 6 CDS-3'UTR Intra-chr 24235 ChimerSeq STARFusion TCGA_RNA-Seq NCOR1-FBXO3 NCOR1 chr17 15960828 - FBXO3 chr11 33792376 - Exonic hg19 BRCA TCGA-D8-A1JD-01A 36 81 In-Frame Inter-chr p11.2 Oncogene p13 Seq+ 24236 ChimerSeq STARFusion TCGA_RNA-Seq CD36-STEAP4 CD36 chr7 80276176 + STEAP4 chr7 87913586 - Exonic hg19 BRCA TCGA-D8-A1JD-01A 4 2 CDS-5'UTR Intra-chr q21.11 q21.12 24237 ChimerSeq STARFusion TCGA_RNA-Seq RAB11FIP1-HTRA4 RAB11FIP1 chr8 37727938 - HTRA4 chr8 38836734 + Exonic hg19 BRCA TCGA-BH-A0EI-01A 33 124 In-Frame Intra-chr p11.23 p11.22 Seq+ 24238 ChimerSeq STARFusion TCGA_RNA-Seq RAB11FIP1-HTRA4 RAB11FIP1 chr8 37727938 - HTRA4 chr8 38839172 + Exonic hg19 BRCA TCGA-BH-A0EI-01A 4 124 In-Frame Intra-chr p11.23 p11.22 Seq+ 24239 ChimerSeq STARFusion TCGA_RNA-Seq LSM1-WHSC1L1 LSM1 chr8 38027320 - WHSC1L1 chr8 38205733 - Exonic hg19 BRCA TCGA-BH-A0EI-01A 9 25 CDS-5'UTR Intra-chr p11.23 p11.23 Tumor suppressor gene Seq+ 24240 ChimerSeq STARFusion TCGA_RNA-Seq ADAM9-UNC5D ADAM9 chr8 38854679 + UNC5D chr8 35406810 + Exonic hg19 BRCA TCGA-BH-A0EI-01A 4 11 In-Frame Intra-chr p12 Tumor suppressor gene Seq+ 24241 ChimerSeq STARFusion TCGA_RNA-Seq FGFR1-GPR124 FGFR1 chr8 38314874 - GPR124 chr8 37672414 + Exonic hg19 BRCA TCGA-BH-A0EI-01A 3 11 Out-of-frame Intra-chr p11.23 TK:FGFR Oncogene 24242 ChimerSeq STARFusion TCGA_RNA-Seq RPSAP58-ARHGAP12 RPSAP58 chr19 23945936 + ARHGAP12 chr10 32150586 - Exonic hg19 BRCA TCGA-BH-A0EI-01A 2 0 5'UTR-CDS Inter-chr p12 p11.22 24243 ChimerSeq STARFusion TCGA_RNA-Seq DCTN2-USP15 DCTN2 chr12 57940811 - USP15 chr12 62687960 + Exonic hg19 BRCA TCGA-BH-A0C1-01B 2 12 Out-of-frame Intra-chr q13.3 q14.1 Seq+ 24244 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1467-EMP1 KIAA1467 chr12 13229077 + EMP1 chr12 13349610 + Exonic hg19 BRCA TCGA-BH-A0C1-01B 3 8 CDS-5'UTR Intra-chr p13.1 Tumor suppressor gene 24245 ChimerSeq STARFusion TCGA_RNA-Seq VGLL4-SYNPR VGLL4 chr3 11744445 - SYNPR chr3 63542219 + Exonic hg19 BRCA TCGA-AR-A0TS-01A 22 38 Out-of-frame Intra-chr p25.2 p14.2 Seq+ 24246 ChimerSeq STARFusion TCGA_RNA-Seq DSN1-SOGA1 DSN1 chr20 35383166 - SOGA1 chr20 35415040 - Exonic hg19 BRCA TCGA-AR-A0TS-01A 14 41 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 24247 ChimerSeq STARFusion TCGA_RNA-Seq GNL2-DNAH3 GNL2 chr1 38061360 - DNAH3 chr16 21128660 - Exonic hg19 BRCA TCGA-AR-A0TS-01A 9 52 Out-of-frame Inter-chr p34.3 p12.3 Seq+ 24248 ChimerSeq STARFusion TCGA_RNA-Seq GNL2-DNAH3 GNL2 chr1 38061360 - DNAH3 chr16 21123125 - Exonic hg19 BRCA TCGA-AR-A0TS-01A 4 52 Out-of-frame Inter-chr p34.3 p12.3 Seq+ 24249 ChimerSeq STARFusion TCGA_RNA-Seq PACSIN2-ARFGAP3 PACSIN2 chr22 43411027 - ARFGAP3 chr22 43237022 - Exonic hg19 BRCA TCGA-AR-A0TS-01A 5 28 5'UTR-CDS Intra-chr q13.2 q13.2 24250 ChimerSeq STARFusion TCGA_RNA-Seq FOXO3-PPP1R9A FOXO3 chr6 108883032 + PPP1R9A chr7 94876785 + Exonic hg19 BRCA TCGA-AR-A0TS-01A 4 27 In-Frame Inter-chr q21 Oncogene Tumor suppressor gene Transcription factor q21.3 Seq+ 24251 ChimerSeq STARFusion TCGA_RNA-Seq USP13-KIAA1804 USP13 chr3 179371181 + KIAA1804 chr1 233518051 + Exonic hg19 BRCA TCGA-AR-A0TS-01A 5 15 Out-of-frame Inter-chr q26.33 Seq+ 24252 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R9A-FOXO3 PPP1R9A chr7 94855428 + FOXO3 chr6 108984658 + Exonic hg19 BRCA TCGA-AR-A0TS-01A 4 17 In-Frame Inter-chr q21.3 q21 Oncogene Tumor suppressor gene Transcription factor Seq+ 24253 ChimerSeq STARFusion TCGA_RNA-Seq U2AF2-RERE U2AF2 chr19 56172555 + RERE chr1 8426034 - Exonic hg19 BRCA TCGA-AR-A0TS-01A 2 20 In-Frame Inter-chr q13.42 p36.23 Seq+ 24254 ChimerSeq STARFusion TCGA_RNA-Seq C1orf198-AGT C1orf198 chr1 230979100 - AGT chr1 230846599 - Exonic hg19 BRCA TCGA-AR-A0TS-01A 2 4 CDS-5'UTR Intra-chr q42.2 q42.2 Seq+ 24255 ChimerSeq STARFusion TCGA_RNA-Seq NCOA2-NRG1 NCOA2 chr8 71315935 - NRG1 chr8 32453346 + Exonic hg19 BRCA TCGA-AR-A0TS-01A 3 0 5'UTR-CDS Intra-chr q13.3 Oncogene Transcription factor p12 24256 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H3-TSTA3 ZC3H3 chr8 144589916 - TSTA3 chr8 144697085 - Exonic hg19 BRCA TCGA-AR-A0TS-01A 2 2 Out-of-frame Intra-chr 24257 ChimerSeq STARFusion TCGA_RNA-Seq FHL1-ANXA2 FHL1 chrX 135252139 + ANXA2 chr15 60656722 - Exonic hg19 BRCA TCGA-AR-A0TS-01A 2 0 5'UTR-CDS Inter-chr q26.3 Tumor suppressor gene q22.2 24258 ChimerSeq STARFusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23748644 - APOO chrX 23851627 - Exonic hg19 BRCA TCGA-A7-A13D-01B 13 164 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 24259 ChimerSeq STARFusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23748644 - APOO chrX 23851729 - Exonic hg19 BRCA TCGA-A7-A13D-01B 11 164 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 24260 ChimerSeq STARFusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23739998 - APOO chrX 23899069 - Exonic hg19 BRCA TCGA-A7-A13D-01B 8 164 In-Frame Intra-chr p22.11 p22.11 Seq+ 24261 ChimerSeq STARFusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23761242 - APOO chrX 23851627 - Exonic hg19 BRCA TCGA-A7-A13D-01B 3 164 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 24262 ChimerSeq STARFusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23731252 - APOO chrX 23899069 - Exonic hg19 BRCA TCGA-A7-A13D-01B 3 164 Out-of-frame Intra-chr p22.11 p22.11 Seq+ 24263 ChimerSeq STARFusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23761242 - APOO chrX 23851729 - Exonic hg19 BRCA TCGA-A7-A13D-01B 2 164 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 24264 ChimerSeq STARFusion TCGA_RNA-Seq UNC13D-SRP68 UNC13D chr17 73829047 - SRP68 chr17 74035423 - Exonic hg19 BRCA TCGA-A7-A13D-01B 5 39 CDS-3'UTR Intra-chr q25.1 q25.1 Seq+ 24265 ChimerSeq STARFusion TCGA_RNA-Seq FDCSP-CSN1S2AP FDCSP chr4 71098743 + CSN1S2AP chr4 70948398 + Exonic hg19 BRCA TCGA-A7-A13D-01B 8 26 CDS-5'UTR Intra-chr q13.3 24266 ChimerSeq STARFusion TCGA_RNA-Seq ARIH2-DHX30 ARIH2 chr3 49011249 + DHX30 chr3 47887190 + Exonic hg19 BRCA TCGA-A7-A13D-01B 9 20 In-Frame Intra-chr p21.31 p21.31 Seq+ 24267 ChimerSeq STARFusion TCGA_RNA-Seq CD59-FBXO3 CD59 chr11 33731752 - FBXO3 chr11 33780147 - Exonic hg19 BRCA TCGA-A7-A13D-01B 9 18 Out-of-frame Intra-chr p13 p13 Seq+ 24268 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-MMP27 TMEM123 chr11 102319543 - MMP27 chr11 102563772 - Exonic hg19 BRCA TCGA-A7-A13D-01B 10 11 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 24269 ChimerSeq STARFusion TCGA_RNA-Seq FDCSP-CSN1S2AP FDCSP chr4 71096968 + CSN1S2AP chr4 70936947 + Exonic hg19 BRCA TCGA-A7-A13D-01B 6 26 CDS-5'UTR Intra-chr q13.3 24270 ChimerSeq STARFusion TCGA_RNA-Seq NEBL-FBXO11 NEBL chr10 21169723 - FBXO11 chr2 48066908 - Exonic hg19 BRCA TCGA-A7-A13D-01B 7 17 Out-of-frame Inter-chr p12.31 p16.3 Seq+ 24271 ChimerSeq STARFusion TCGA_RNA-Seq ASXL1-TM9SF4 ASXL1 chr20 30956926 + TM9SF4 chr20 30720816 + Exonic hg19 BRCA TCGA-A7-A13D-01B 3 13 In-Frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 24272 ChimerSeq STARFusion TCGA_RNA-Seq GANAB-ZNF76 GANAB chr11 62400037 - ZNF76 chr6 35248833 + Exonic hg19 BRCA TCGA-A7-A13D-01B 5 5 CDS-5'UTR Inter-chr q12.3 Tumor suppressor gene p21.31 Transcription factor Seq+ 24273 ChimerSeq STARFusion TCGA_RNA-Seq PBX1-DISC1 PBX1 chr1 164532548 + DISC1 chr1 232094574 + Exonic hg19 BRCA TCGA-A7-A13D-01B 3 13 In-Frame Intra-chr q23.3 Oncogene Transcription factor q42.2 Seq+ 24274 ChimerSeq STARFusion TCGA_RNA-Seq RFT1-DCP1A RFT1 chr3 53137969 - DCP1A chr3 53353500 - Exonic hg19 BRCA TCGA-A7-A13D-01B 4 6 In-Frame Intra-chr p21.1 p21.1 Seq+ 24275 ChimerSeq STARFusion TCGA_RNA-Seq PARN-RRN3 PARN chr16 14711447 - RRN3 chr16 15178562 - Exonic hg19 BRCA TCGA-A7-A13D-01B 3 8 In-Frame Intra-chr p13.11 Seq+ 24276 ChimerSeq STARFusion TCGA_RNA-Seq MTF2-RPL5 MTF2 chr1 93581175 + RPL5 chr1 93306108 + Exonic hg19 BRCA TCGA-A7-A13D-01B 3 4 Out-of-frame Intra-chr p22.1 Transcription factor p22.1 Tumor suppressor gene Seq+ 24277 ChimerSeq STARFusion TCGA_RNA-Seq MELK-RGP1 MELK chr9 36597287 + RGP1 chr9 35749734 + Exonic hg19 BRCA TCGA-A7-A13D-01B 2 3 5'UTR-5'UTR Intra-chr p13.2 CAMK:CAMKL p13.3 Seq+ 24278 ChimerSeq STARFusion TCGA_RNA-Seq DPP3-PACS1 DPP3 chr11 66264948 + PACS1 chr11 65998019 + Exonic hg19 BRCA TCGA-A7-A13D-01B 2 0 In-Frame Intra-chr q13.2 q13.1 Seq+ 24279 ChimerSeq STARFusion TCGA_RNA-Seq MRS2-FAM65B MRS2 chr6 24403464 + FAM65B chr6 24876045 - Exonic hg19 BRCA TCGA-E2-A1II-01A 21 52 CDS-5'UTR Intra-chr p22.3 Seq+ 24280 ChimerSeq STARFusion TCGA_RNA-Seq SCD-IGKC SCD chr10 102122823 + IGKC chr2 89161431 - Exonic hg19 BRCA TCGA-E2-A1II-01A 30 1 Out-of-frame Inter-chr q24.31 p11.2 24281 ChimerSeq STARFusion TCGA_RNA-Seq USP34-WDR92 USP34 chr2 61697785 - WDR92 chr2 68374699 - Exonic hg19 BRCA TCGA-E2-A1II-01A 8 22 Out-of-frame Intra-chr p15 p14 Seq+ 24282 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106175004 - Exonic hg19 BRCA TCGA-E2-A1II-01A 11 1 Out-of-frame Inter-chr q24.2 32.33 24283 ChimerSeq STARFusion TCGA_RNA-Seq BRD4-CSE1L BRD4 chr19 15443101 - CSE1L chr20 47689105 + Exonic hg19 BRCA TCGA-E2-A1II-01A 10 4 5'UTR-5'UTR Inter-chr p13.12 Atypical:BRD q13.13 Seq+ 24284 ChimerSeq STARFusion TCGA_RNA-Seq SIAH2-SERP1 SIAH2 chr3 150480220 - SERP1 chr3 150284893 - Exonic hg19 BRCA TCGA-E2-A1II-01A 3 16 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 24285 ChimerSeq STARFusion TCGA_RNA-Seq ZMYM5-PSPC1 ZMYM5 chr13 20425495 - PSPC1 chr13 20304484 - Exonic hg19 BRCA TCGA-E2-A1II-01A 2 19 Out-of-frame Intra-chr q12.11 q12.11 24286 ChimerSeq STARFusion TCGA_RNA-Seq ATP11C-PREX1 ATP11C chrX 139014175 - PREX1 chr20 47309328 - Exonic hg19 BRCA TCGA-E2-A1II-01A 3 4 5'UTR-CDS Inter-chr q27.1 q13.13 Seq+ 24287 ChimerSeq STARFusion TCGA_RNA-Seq FAM3C-SUSD2 FAM3C chr7 121011354 - SUSD2 chr22 24581062 + Exonic hg19 BRCA TCGA-E9-A247-01A 24 80 In-Frame Inter-chr q31.31 q11.23 Seq+ 24288 ChimerSeq STARFusion TCGA_RNA-Seq TOX3-PHKB TOX3 chr16 52580549 - PHKB chr16 47644737 + Exonic hg19 BRCA TCGA-E9-A247-01A 17 79 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 24289 ChimerSeq STARFusion TCGA_RNA-Seq TOX3-PHKB TOX3 chr16 52580549 - PHKB chr16 47627411 + Exonic hg19 BRCA TCGA-E9-A247-01A 8 79 In-Frame Intra-chr q12.1 q12.1 Seq+ 24290 ChimerSeq STARFusion TCGA_RNA-Seq HIPK2-ZC3HAV1 HIPK2 chr7 139477404 - ZC3HAV1 chr7 138774505 - Exonic hg19 BRCA TCGA-E9-A247-01A 4 11 Out-of-frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Seq+ 24291 ChimerSeq STARFusion TCGA_RNA-Seq FTL-KBTBD2 FTL chr19 49469663 + KBTBD2 chr7 32933708 - Exonic hg19 BRCA TCGA-E9-A1RF-01A 500 1306 CDS-5'UTR Inter-chr q13.33 p14.3 Seq+ 24292 ChimerSeq STARFusion TCGA_RNA-Seq SUPT5H-SIPA1L3 SUPT5H chr19 39936605 + SIPA1L3 chr19 38643480 + Exonic hg19 BRCA TCGA-E9-A1RF-01A 41 212 Out-of-frame Intra-chr q13.2 q13.13 Seq+ 24293 ChimerSeq STARFusion TCGA_RNA-Seq SPAG9-FAM117A SPAG9 chr17 49197715 - FAM117A chr17 47797798 - Exonic hg19 BRCA TCGA-E9-A1RF-01A 36 78 In-Frame Intra-chr q21.33 q21.33 Seq+ 24294 ChimerSeq STARFusion TCGA_RNA-Seq MICAL1-AK9 MICAL1 chr6 109771173 - AK9 chr6 109819168 - Exonic hg19 BRCA TCGA-E9-A1RF-01A 23 78 Out-of-frame Intra-chr q21 q21 Seq+ 24295 ChimerSeq STARFusion TCGA_RNA-Seq RWDD1-WASF1 RWDD1 chr6 116892818 + WASF1 chr6 110448832 - Exonic hg19 BRCA TCGA-E9-A1RF-01A 19 76 5'UTR-5'UTR Intra-chr q22.1 q21 Seq+ 24296 ChimerSeq STARFusion TCGA_RNA-Seq RWDD1-WASF1 RWDD1 chr6 116892818 + WASF1 chr6 110434663 - Exonic hg19 BRCA TCGA-E9-A1RF-01A 2 75 In-Frame Intra-chr q22.1 q21 Seq+ 24297 ChimerSeq STARFusion TCGA_RNA-Seq RWDD1-WASF1 RWDD1 chr6 116895334 + WASF1 chr6 110448832 - Exonic hg19 BRCA TCGA-E9-A1RF-01A 2 75 5'UTR-5'UTR Intra-chr q22.1 q21 Seq+ 24298 ChimerSeq STARFusion TCGA_RNA-Seq MAN1A1-PDSS2 MAN1A1 chr6 119669628 - PDSS2 chr6 107475981 - Exonic hg19 BRCA TCGA-E9-A1RF-01A 9 16 In-Frame Intra-chr q22.31 q21 Tumor suppressor gene Seq+ 24299 ChimerSeq STARFusion TCGA_RNA-Seq OSTM1-CEP85L OSTM1 chr6 108395454 - CEP85L chr6 118953774 - Exonic hg19 BRCA TCGA-E9-A1RF-01A 5 20 Out-of-frame Intra-chr q21 q22.31 Seq+ 24300 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38075947 + MIPOL1 chr14 37969113 + Exonic hg19 BRCA TCGA-E9-A1RF-01A 4 18 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 24301 ChimerSeq STARFusion TCGA_RNA-Seq SRCIN1-FNDC8 SRCIN1 chr17 36717699 - FNDC8 chr17 33454061 + Exonic hg19 BRCA TCGA-E9-A1RF-01A 7 4 In-Frame Intra-chr q12 q12 Seq+ 24302 ChimerSeq STARFusion TCGA_RNA-Seq TLK2-SIGLEC9 TLK2 chr17 60678181 + SIGLEC9 chr19 51639219 + Exonic hg19 BRCA TCGA-E9-A1RF-01A 5 12 Out-of-frame Inter-chr q23.2 Other:TLK q13.41 Seq+ 24303 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38092208 + MIPOL1 chr14 38016110 + Exonic hg19 BRCA TCGA-E9-A1RF-01A 2 18 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 24304 ChimerSeq STARFusion TCGA_RNA-Seq C19orf55-IGFLR1 C19orf55 chr19 36250892 + IGFLR1 chr19 36230527 - Exonic hg19 BRCA TCGA-E9-A1RF-01A 2 13 Out-of-frame Intra-chr q13.12 Seq+ 24305 ChimerSeq STARFusion TCGA_RNA-Seq HDAC5-MSR1 HDAC5 chr17 42155965 - MSR1 chr8 15978115 - Exonic hg19 BRCA TCGA-E9-A1RF-01A 4 5 Out-of-frame Inter-chr q21.31 p22 Seq+ 24306 ChimerSeq STARFusion TCGA_RNA-Seq LIG3-ZFAT LIG3 chr17 33321450 + ZFAT chr8 135490964 - Exonic hg19 BRCA TCGA-E9-A1RF-01A 2 10 In-Frame Inter-chr q12 Tumor suppressor gene q24.22 Transcription factor Seq+ 24307 ChimerSeq STARFusion TCGA_RNA-Seq PDSS2-SOBP PDSS2 chr6 107655402 - SOBP chr6 107979411 + Exonic hg19 BRCA TCGA-E9-A1RF-01A 2 9 CDS-3'UTR Intra-chr q21 Tumor suppressor gene q21 Seq+ 24308 ChimerSeq STARFusion TCGA_RNA-Seq RIPK1-BCKDHB RIPK1 chr6 3085642 + BCKDHB chr6 80982852 + Exonic hg19 BRCA TCGA-E9-A1RE-01A 19 40 Out-of-frame Intra-chr p25.2 TKL:RIPK q14.1 Seq+ 24309 ChimerSeq STARFusion TCGA_RNA-Seq CCDC149-ARAP2 CCDC149 chr4 24875303 - ARAP2 chr4 36075445 - Exonic hg19 BRCA TCGA-E9-A1RE-01A 9 27 In-Frame Intra-chr p15.2 p14 Seq+ 24310 ChimerSeq STARFusion TCGA_RNA-Seq RPL23AP79-IGH@ RPL23AP79 chr19 59093145 + IGH@ chr14 106331457 - Exonic hg19 BRCA TCGA-E9-A1RE-01A 12 0 Out-of-frame Inter-chr 32.33 24311 ChimerSeq STARFusion TCGA_RNA-Seq RPL23AP79-IGHG3 RPL23AP79 chr19 59093145 + IGHG3 chr14 106331457 - Exonic hg19 BRCA TCGA-E9-A1RE-01A 12 0 Out-of-frame Inter-chr 24312 ChimerSeq STARFusion TCGA_RNA-Seq RPL23AP79-IGHJ2 RPL23AP79 chr19 59093145 + IGHJ2 chr14 106331457 - Exonic hg19 BRCA TCGA-E9-A1RE-01A 12 0 Out-of-frame Inter-chr 24313 ChimerSeq STARFusion TCGA_RNA-Seq PRKDC-ARHGAP23P1 PRKDC chr8 48694723 - ARHGAP23P1 chr16 33729010 - Exonic hg19 BRCA TCGA-E9-A1RE-01A 4 15 Out-of-frame Inter-chr q11.21 Oncogene p11.2 24314 ChimerSeq STARFusion TCGA_RNA-Seq PRKDC-ARHGAP23P1 PRKDC chr8 48694939 - ARHGAP23P1 chr16 33729010 - Exonic hg19 BRCA TCGA-E9-A1RE-01A 3 8 Out-of-frame Inter-chr q11.21 Oncogene p11.2 24315 ChimerSeq STARFusion TCGA_RNA-Seq SLC20A2-UNC5D SLC20A2 chr8 42396681 - UNC5D chr8 35425616 + Exonic hg19 BRCA TCGA-E9-A1RE-01A 2 12 5'UTR-CDS Intra-chr p11.21 p12 Tumor suppressor gene Seq+ 24316 ChimerSeq STARFusion TCGA_RNA-Seq ZFX-KLHL15 ZFX chrX 24227157 + KLHL15 chrX 24007147 - Exonic hg19 BRCA TCGA-BH-A1EX-01A 19 103 Out-of-frame Intra-chr p22.11 Transcription factor p22.11 Seq+ 24317 ChimerSeq STARFusion TCGA_RNA-Seq ZFX-KLHL15 ZFX chrX 24226487 + KLHL15 chrX 24007147 - Exonic hg19 BRCA TCGA-BH-A1EX-01A 3 90 Out-of-frame Intra-chr p22.11 Transcription factor p22.11 Seq+ 24318 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-LRP5 PPFIA1 chr11 70222706 + LRP5 chr11 68178904 + Exonic hg19 BRCA TCGA-BH-A0C3-01A 17 25 Out-of-frame Intra-chr q13.3 q13.2 Seq+ 24319 ChimerSeq STARFusion TCGA_RNA-Seq SKAP1-ABCC11 SKAP1 chr17 46423267 - ABCC11 chr16 48209328 - Exonic hg19 BRCA TCGA-BH-A0C3-01A 7 35 In-Frame Inter-chr q21.32 q12.1 Seq+ 24320 ChimerSeq STARFusion TCGA_RNA-Seq SKAP1-ABCC11 SKAP1 chr17 46423267 - ABCC11 chr16 48211024 - Exonic hg19 BRCA TCGA-BH-A0C3-01A 6 35 Out-of-frame Inter-chr q21.32 q12.1 Seq+ 24321 ChimerSeq STARFusion TCGA_RNA-Seq COG5-CEP41 COG5 chr7 107052947 - CEP41 chr7 130034807 - Exonic hg19 BRCA TCGA-BH-A0HI-01A 4 61 CDS-3'UTR Intra-chr q32.2 Seq+ 24322 ChimerSeq STARFusion TCGA_RNA-Seq SEMA6A-DTWD2 SEMA6A chr5 115909881 - DTWD2 chr5 118280344 - Exonic hg19 BRCA TCGA-BH-A0HI-01A 2 4 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 24323 ChimerSeq STARFusion TCGA_RNA-Seq ANO6-IAPP ANO6 chr12 45816845 + IAPP chr12 21531171 + Exonic hg19 BRCA TCGA-E2-A1L8-01A 57 162 Out-of-frame Intra-chr q12 p12.1 Seq+ 24324 ChimerSeq STARFusion TCGA_RNA-Seq NAIP-OCLN NAIP chr5 70269956 - OCLN chr5 68830521 + Exonic hg19 BRCA TCGA-E2-A1L8-01A 4 29 Out-of-frame Intra-chr q13.2 q13.2 24325 ChimerSeq STARFusion TCGA_RNA-Seq STYXL1-PRPF40B STYXL1 chr7 75643060 - PRPF40B chr12 49977345 + Exonic hg19 BRCA TCGA-E2-A1L8-01A 5 22 CDS-5'UTR Inter-chr q11.23 q13.12 Seq+ 24326 ChimerSeq STARFusion TCGA_RNA-Seq STYXL1-PRPF40B STYXL1 chr7 75643060 - PRPF40B chr12 49975170 + Exonic hg19 BRCA TCGA-E2-A1L8-01A 4 22 CDS-5'UTR Inter-chr q11.23 q13.12 Seq+ 24327 ChimerSeq STARFusion TCGA_RNA-Seq MDH2-PAWR MDH2 chr7 75689816 + PAWR chr12 79990438 - Exonic hg19 BRCA TCGA-E2-A1L8-01A 2 25 Out-of-frame Inter-chr q11.23 q21.2 Tumor suppressor gene Seq+ 24328 ChimerSeq STARFusion TCGA_RNA-Seq NELL2-ATF7 NELL2 chr12 45315573 - ATF7 chr12 53946421 - Exonic hg19 BRCA TCGA-E2-A1L8-01A 3 12 5'UTR-CDS Intra-chr q12 q13.13 Transcription factor Seq+ 24329 ChimerSeq STARFusion TCGA_RNA-Seq PHF15-RPLP0P2 PHF15 chr5 133873773 + RPLP0P2 chr11 61396314 + Exonic hg19 BRCA TCGA-E9-A1R5-01A 11 35 CDS-5'UTR Inter-chr q12.2 24330 ChimerSeq STARFusion TCGA_RNA-Seq TRAM1-CLEC2D TRAM1 chr8 71495399 - CLEC2D chr12 9833519 + Exonic hg19 BRCA TCGA-E9-A1R5-01A 2 0 In-Frame Inter-chr q13.3 p13.31 24331 ChimerSeq STARFusion TCGA_RNA-Seq TRIT1-CHI3L2 TRIT1 chr1 40348990 - CHI3L2 chr1 111772474 + Exonic hg19 BRCA TCGA-XX-A89A-01A 23 124 Out-of-frame Intra-chr p34.2 Tumor suppressor gene p13.2 Seq+ 24332 ChimerSeq STARFusion TCGA_RNA-Seq TRIT1-CHI3L2 TRIT1 chr1 40348990 - CHI3L2 chr1 111770286 + Exonic hg19 BRCA TCGA-XX-A89A-01A 7 124 CDS-5'UTR Intra-chr p34.2 Tumor suppressor gene p13.2 Seq+ 24333 ChimerSeq STARFusion TCGA_RNA-Seq ILF3-DENND2D ILF3 chr19 10787986 + DENND2D chr1 111738678 - Exonic hg19 BRCA TCGA-XX-A89A-01A 4 8 Out-of-frame Inter-chr p13.2 p13.2 Tumor suppressor gene Seq+ 24334 ChimerSeq STARFusion TCGA_RNA-Seq LRRC59-SPAG9 LRRC59 chr17 48469759 - SPAG9 chr17 49057278 - Exonic hg19 BRCA TCGA-E9-A1NC-01A 32 92 In-Frame Intra-chr q21.33 q21.33 Seq+ 24335 ChimerSeq STARFusion TCGA_RNA-Seq FURIN-IGKC FURIN chr15 91424203 + IGKC chr2 89160434 - Exonic hg19 BRCA TCGA-E9-A1NC-01A 7 1 Out-of-frame Inter-chr q26.1 p11.2 24336 ChimerSeq STARFusion TCGA_RNA-Seq CCT5-MARCH6 CCT5 chr5 10254950 + 2019_ 3_ 6_ chr5 10377910 + Exonic hg19 BRCA TCGA-E9-A1NC-01A 2 7 Out-of-frame Intra-chr p15.2 p15.2 24337 ChimerSeq STARFusion TCGA_RNA-Seq LPP-ADIPOQ LPP chr3 187943315 + ADIPOQ chr3 186570840 + Exonic hg19 BRCA TCGA-D8-A1XW-01A 37 133 5'UTR-5'UTR Intra-chr q27.3 Oncogene q27.3 Seq+ 24338 ChimerSeq STARFusion TCGA_RNA-Seq LPP-ADIPOQ LPP chr3 187871809 + ADIPOQ chr3 186570840 + Exonic hg19 BRCA TCGA-D8-A1XW-01A 6 133 5'UTR-5'UTR Intra-chr q27.3 Oncogene q27.3 Seq+ 24339 ChimerSeq STARFusion TCGA_RNA-Seq LPP-ADIPOQ LPP chr3 188059507 + ADIPOQ chr3 186570840 + Exonic hg19 BRCA TCGA-D8-A1XW-01A 6 133 5'UTR-5'UTR Intra-chr q27.3 Oncogene q27.3 Seq+ 24340 ChimerSeq STARFusion TCGA_RNA-Seq PODXL-TYW1B PODXL chr7 131241019 - TYW1B chr7 72093982 - Exonic hg19 BRCA TCGA-D8-A1XW-01A 2 4 Out-of-frame Intra-chr q32.3 q11.23 Seq+ 24341 ChimerSeq STARFusion TCGA_RNA-Seq LCOR-TM9SF3 LCOR chr10 98667504 + TM9SF3 chr10 98325183 - Exonic hg19 BRCA TCGA-D8-A1XW-01A 2 1 5'UTR-CDS Intra-chr q24.1 Transcription factor q24.1 24342 ChimerSeq STARFusion TCGA_RNA-Seq RABGGTB-PCCA RABGGTB chr1 76253289 + PCCA chr13 101167681 + Exonic hg19 BRCA TCGA-D8-A1XW-01A 2 0 In-Frame Inter-chr p31.1 q32.3 24343 ChimerSeq STARFusion TCGA_RNA-Seq RPL27A-MRPL14 RPL27A chr11 8704812 + MRPL14 chr6 44084366 - Exonic hg19 BRCA TCGA-D8-A1XW-01A 2 0 CDS-5'UTR Inter-chr p15.4 p21.1 24344 ChimerSeq STARFusion TCGA_RNA-Seq PLIN2-CA10 PLIN2 chr9 19123563 - CA10 chr17 49825178 - Exonic hg19 BRCA TCGA-D8-A1JA-01A 10 38 5'UTR-CDS Inter-chr p22.1 q22 Seq+ 24345 ChimerSeq STARFusion TCGA_RNA-Seq LLGL2-CA10 LLGL2 chr17 73521906 + CA10 chr17 50008492 - Exonic hg19 BRCA TCGA-D8-A1JA-01A 10 4 5'UTR-CDS Intra-chr q25.1 q22 Seq+ 24346 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL9-CYP4Z1 OSBPL9 chr1 52215867 + CYP4Z1 chr1 47533247 + Exonic hg19 BRCA TCGA-D8-A1JA-01A 5 15 In-Frame Intra-chr p32.3 p33 Seq+ 24347 ChimerSeq STARFusion TCGA_RNA-Seq FRAS1-CCSER1 FRAS1 chr4 78987170 + CCSER1 chr4 92519723 + Exonic hg19 BRCA TCGA-D8-A1JA-01A 5 5 Out-of-frame Intra-chr q21.21 q22.1 Seq+ 24348 ChimerSeq STARFusion TCGA_RNA-Seq KAT7-SPOP KAT7 chr17 47875920 + SPOP chr17 47714171 - Exonic hg19 BRCA TCGA-D8-A1JA-01A 2 17 CDS-5'UTR Intra-chr q21.33 Transcription factor q21.33 Oncogene Tumor suppressor gene Seq+ 24349 ChimerSeq STARFusion TCGA_RNA-Seq KAT7-SPOP KAT7 chr17 47875920 + SPOP chr17 47700238 - Exonic hg19 BRCA TCGA-D8-A1JA-01A 2 17 CDS-5'UTR Intra-chr q21.33 Transcription factor q21.33 Oncogene Tumor suppressor gene Seq+ 24350 ChimerSeq STARFusion TCGA_RNA-Seq HOXB6-SKAP1 HOXB6 chr17 46681842 - SKAP1 chr17 46214699 - Exonic hg19 BRCA TCGA-D8-A1JA-01A 2 8 5'UTR-CDS Intra-chr q21.32 Transcription factor q21.32 Seq+ 24351 ChimerSeq STARFusion TCGA_RNA-Seq HDAC7-SENP1 HDAC7 chr12 48213550 - SENP1 chr12 48495299 - Exonic hg19 BRCA TCGA-D8-A1JA-01A 2 3 CDS-5'UTR Intra-chr q13.11 q13.11 24352 ChimerSeq STARFusion TCGA_RNA-Seq TTC19-ARHGAP44 TTC19 chr17 15930016 + ARHGAP44 chr17 12798257 + Exonic hg19 BRCA TCGA-D8-A1JA-01A 2 1 Out-of-frame Intra-chr p12 p12 24353 ChimerSeq STARFusion TCGA_RNA-Seq CCSER1-CXCL13 CCSER1 chr4 91645142 + CXCL13 chr4 78526978 + Exonic hg19 BRCA TCGA-D8-A1JA-01A 2 0 Out-of-frame Intra-chr q22.1 q21.1 24354 ChimerSeq STARFusion TCGA_RNA-Seq SIDT1-ERCC5 SIDT1 chr3 113286557 + ERCC5 chr13 103506638 + Exonic hg19 BRCA TCGA-D8-A1JA-01A 2 0 In-Frame Inter-chr q13.2 q33.1 Oncogene 24355 ChimerSeq STARFusion TCGA_RNA-Seq LOC145837-CORO2B LOC145837 chr15 69863243 + CORO2B chr15 69018182 + Exonic hg19 BRCA TCGA-BH-A0DS-01A 12 15 5'UTR-CDS Intra-chr q23 24356 ChimerSeq STARFusion TCGA_RNA-Seq ODF2-SLC2A8 ODF2 chr9 131250304 + SLC2A8 chr9 130169715 + Exonic hg19 BRCA TCGA-BH-A0DS-01A 7 14 CDS-3'UTR Intra-chr q34.11 q33.3 Seq+ 24357 ChimerSeq STARFusion TCGA_RNA-Seq VPS37C-FADS3 VPS37C chr11 60928863 - FADS3 chr11 61647623 - Exonic hg19 BRCA TCGA-BH-A0DS-01A 5 6 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 24358 ChimerSeq STARFusion TCGA_RNA-Seq ZNF703-EIF4EBP1 ZNF703 chr8 37553740 + EIF4EBP1 chr8 37914599 + Exonic hg19 BRCA TCGA-AR-A5QQ-01A 55 299 Out-of-frame Intra-chr p11.23 Transcription factor p11.23 Seq+ 24359 ChimerSeq STARFusion TCGA_RNA-Seq HDDC2-FAM47E HDDC2 chr6 125613987 - FAM47E chr4 77184857 + Exonic hg19 BRCA TCGA-AR-A5QQ-01A 6 41 In-Frame Inter-chr q22.31 q21.1 Seq+ 24360 ChimerSeq STARFusion TCGA_RNA-Seq LINC00398-CA4 LINC00398 chr13 31377729 + CA4 chr17 58232675 + Exonic hg19 BRCA TCGA-A2-A0YL-01A 5 15 Out-of-frame Inter-chr q12.3 q23.1 24361 ChimerSeq STARFusion TCGA_RNA-Seq RNGTT-PLEKHF2 RNGTT chr6 89388072 - PLEKHF2 chr8 96166259 + Exonic hg19 BRCA TCGA-A2-A0YL-01A 2 0 CDS-5'UTR Inter-chr q15 q22.1 24362 ChimerSeq STARFusion TCGA_RNA-Seq FAM111B-MS4A5 FAM111B chr11 58877179 + MS4A5 chr11 60198269 + Exonic hg19 BRCA TCGA-B6-A0IG-01A 59 215 In-Frame Intra-chr q12.1 q12.2 Seq+ 24363 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-RHOD KDM2A chr11 67018269 + RHOD chr11 66833367 + Exonic hg19 BRCA TCGA-B6-A0IG-01A 31 128 Out-of-frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 24364 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-RHOD KDM2A chr11 67017817 + RHOD chr11 66833367 + Exonic hg19 BRCA TCGA-B6-A0IG-01A 8 128 5'UTR-CDS Intra-chr q13.2 Transcription factor q13.2 Seq+ 24365 ChimerSeq STARFusion TCGA_RNA-Seq PRRG4-RAPGEFL1 PRRG4 chr11 32852178 + RAPGEFL1 chr17 38345118 + Exonic hg19 BRCA TCGA-B6-A0IG-01A 13 83 Out-of-frame Inter-chr p13 q21.1 Seq+ 24366 ChimerSeq STARFusion TCGA_RNA-Seq ERC1-PIK3C2G ERC1 chr12 1299218 + PIK3C2G chr12 18641383 + Exonic hg19 BRCA TCGA-B6-A0IG-01A 13 25 In-Frame Intra-chr p12.3 Seq+ 24367 ChimerSeq STARFusion TCGA_RNA-Seq MED24-CEP95 MED24 chr17 38209551 - CEP95 chr17 62517520 + Exonic hg19 BRCA TCGA-B6-A0IG-01A 6 53 Out-of-frame Intra-chr q21.1 q23.3 Seq+ 24368 ChimerSeq STARFusion TCGA_RNA-Seq MED24-CEP95 MED24 chr17 38209551 - CEP95 chr17 62521888 + Exonic hg19 BRCA TCGA-B6-A0IG-01A 4 53 In-Frame Intra-chr q21.1 q23.3 Seq+ 24369 ChimerSeq STARFusion TCGA_RNA-Seq EZH1-TOP2A EZH1 chr17 40854895 - TOP2A chr17 38561135 - Exonic hg19 BRCA TCGA-B6-A0IG-01A 2 5 Out-of-frame Intra-chr q21.2 Tumor suppressor gene q21.2 Seq+ 24370 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC9-KCNK9 TRAPPC9 chr8 140898123 - KCNK9 chr8 140631342 - Exonic hg19 BRCA TCGA-B6-A0IG-01A 2 1 In-Frame Intra-chr q24.3 q24.3 24371 ChimerSeq STARFusion TCGA_RNA-Seq CHD4-CLEC9A CHD4 chr12 6686951 - CLEC9A chr12 10194065 + Exonic hg19 BRCA TCGA-AO-A12A-01A 5 38 CDS-5'UTR Intra-chr p13.31 p13.2 Seq+ 24372 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-TOR1AIP2 CPSF6 chr12 69656342 + TOR1AIP2 chr1 179821946 - Exonic hg19 BRCA TCGA-AO-A12A-01A 2 0 3'UTR-5'UTR Inter-chr q15 q25.2 24373 ChimerSeq STARFusion TCGA_RNA-Seq MPHOSPH8-SUGT1P3 MPHOSPH8 chr13 20233429 + SUGT1P3 chr13 41486859 - Exonic hg19 BRCA TCGA-AO-A12A-01A 2 0 CDS-3'UTR Intra-chr q12.11 q14.11 24374 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-PSME2 CTTN chr11 70244720 + PSME2 chr14 24612880 - Exonic hg19 BRCA TCGA-A2-A0EQ-01A 161 88 5'UTR-CDS Inter-chr q13.3 q12 Seq+ 24375 ChimerSeq STARFusion TCGA_RNA-Seq ACER3-NRL ACER3 chr11 76572123 + NRL chr14 24552084 - Exonic hg19 BRCA TCGA-A2-A0EQ-01A 2 20 CDS-5'UTR Inter-chr q13.5 q12 Transcription factor Seq+ 24376 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-EMC9 CTTN chr11 70244720 + EMC9 chr14 24610525 - Exonic hg19 BRCA TCGA-A2-A0EQ-01A 6 0 Out-of-frame Inter-chr q13.3 q12 24377 ChimerSeq STARFusion TCGA_RNA-Seq GRHL2-PAGE3 GRHL2 chr8 102571040 + PAGE3 chrX 55289792 - Exonic hg19 BRCA TCGA-A2-A0EQ-01A 2 9 CDS-3'UTR Inter-chr q22.3 Transcription factor p11.21 Seq+ 24378 ChimerSeq STARFusion TCGA_RNA-Seq PHC3-SEC62 PHC3 chr3 169854207 - SEC62 chr3 169710382 + Exonic hg19 BRCA TCGA-A8-A09Z-01A 2 1 In-Frame Intra-chr q26.2 Tumor suppressor gene q26.2 24379 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-ACE TANC2 chr17 61457187 + ACE chr17 61563918 + Exonic hg19 BRCA TCGA-D8-A1JJ-01A 32 105 In-Frame Intra-chr q23.2 q23.3 Seq+ 24380 ChimerSeq STARFusion TCGA_RNA-Seq GRHL2-TPD52 GRHL2 chr8 102565010 + TPD52 chr8 80954903 - Exonic hg19 BRCA TCGA-D8-A1JJ-01A 3 9 In-Frame Intra-chr q22.3 Transcription factor q21.13 Seq+ 24381 ChimerSeq STARFusion TCGA_RNA-Seq MAN1A2-CD101 MAN1A2 chr1 118009049 + CD101 chr1 117576482 + Exonic hg19 BRCA TCGA-OL-A5D7-01A 42 117 In-Frame Intra-chr p12 p13.1 Seq+ 24382 ChimerSeq STARFusion TCGA_RNA-Seq CHAF1A-CCDC94 CHAF1A chr19 4428887 + CCDC94 chr19 4261991 + Exonic hg19 BRCA TCGA-OL-A5D7-01A 33 145 In-Frame Intra-chr p13.3 p13.3 Seq+ 24383 ChimerSeq STARFusion TCGA_RNA-Seq PIP5K1C-PALM PIP5K1C chr19 3660964 - PALM chr19 746285 + Exonic hg19 BRCA TCGA-OL-A5D7-01A 18 52 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 24384 ChimerSeq STARFusion TCGA_RNA-Seq AFG3L1P-TCF25 AFG3L1P chr16 90039173 + TCF25 chr16 89952256 + Exonic hg19 BRCA TCGA-OL-A5D7-01A 13 69 5'UTR-CDS Intra-chr q24.3 q24.3 24385 ChimerSeq STARFusion TCGA_RNA-Seq MTMR1-HS1BP3 MTMR1 chrX 149924337 + HS1BP3 chr2 20840940 - Exonic hg19 BRCA TCGA-OL-A5D7-01A 14 60 In-Frame Inter-chr q28 p24.1 Seq+ 24386 ChimerSeq STARFusion TCGA_RNA-Seq FRYL-DTD1 FRYL chr4 48621291 - DTD1 chr20 18724744 + Exonic hg19 BRCA TCGA-OL-A5D7-01A 5 88 In-Frame Inter-chr p11 p11.23 Seq+ 24387 ChimerSeq STARFusion TCGA_RNA-Seq PHRF1-GCGR PHRF1 chr11 609411 + GCGR chr17 79766699 + Exonic hg19 BRCA TCGA-OL-A5D7-01A 13 46 Out-of-frame Inter-chr p15.5 q25.3 Seq+ 24388 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC1-MAP4 SMARCC1 chr3 47755905 - MAP4 chr3 47912776 - Exonic hg19 BRCA TCGA-OL-A5D7-01A 9 44 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 24389 ChimerSeq STARFusion TCGA_RNA-Seq PIP5K1C-PALM PIP5K1C chr19 3660964 - PALM chr19 736019 + Exonic hg19 BRCA TCGA-OL-A5D7-01A 4 52 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 24390 ChimerSeq STARFusion TCGA_RNA-Seq SOGA1-SAMHD1 SOGA1 chr20 35457457 - SAMHD1 chr20 35547922 - Exonic hg19 BRCA TCGA-OL-A5D7-01A 9 20 In-Frame Intra-chr q11.23 q11.23 Seq+ 24391 ChimerSeq STARFusion TCGA_RNA-Seq AFAP1-ABLIM2 AFAP1 chr4 7857193 - ABLIM2 chr4 8099009 - Exonic hg19 BRCA TCGA-OL-A5D7-01A 9 16 In-Frame Intra-chr p16.1 p16.1 Seq+ 24392 ChimerSeq STARFusion TCGA_RNA-Seq STK11-KDM4B STK11 chr19 1207202 + KDM4B chr19 5032877 + Exonic hg19 BRCA TCGA-OL-A5D7-01A 4 35 CDS-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 24393 ChimerSeq STARFusion TCGA_RNA-Seq FIP1L1-SBNO2 FIP1L1 chr4 54292132 + SBNO2 chr19 1113703 - Exonic hg19 BRCA TCGA-OL-A5D7-01A 5 18 Out-of-frame Inter-chr q12 p13.3 Seq+ 24394 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-HMHA1 SBNO2 chr19 1108378 - HMHA1 chr19 1077856 + Exonic hg19 BRCA TCGA-OL-A5D7-01A 4 15 Out-of-frame Intra-chr p13.3 Seq+ 24395 ChimerSeq STARFusion TCGA_RNA-Seq DNAH1-ALAS1 DNAH1 chr3 52350561 + ALAS1 chr3 52245299 + Exonic hg19 BRCA TCGA-OL-A5D7-01A 4 13 5'UTR-CDS Intra-chr p21.1 p21.2 Seq+ 24396 ChimerSeq STARFusion TCGA_RNA-Seq GLYCTK-ALAS1 GLYCTK chr3 52325127 + ALAS1 chr3 52245299 + Exonic hg19 BRCA TCGA-OL-A5D7-01A 3 16 In-Frame Intra-chr p21.2 p21.2 Seq+ 24397 ChimerSeq STARFusion TCGA_RNA-Seq PIK3R3-LRRC41 PIK3R3 chr1 46527601 - LRRC41 chr1 46747057 - Exonic hg19 BRCA TCGA-OL-A5D7-01A 2 12 Out-of-frame Intra-chr p34.1 p33 Seq+ 24398 ChimerSeq STARFusion TCGA_RNA-Seq POC1A-TLR9 POC1A chr3 52156395 - TLR9 chr3 52259651 - Exonic hg19 BRCA TCGA-OL-A5D7-01A 3 7 CDS-5'UTR Intra-chr p21.2 p21.2 Seq+ 24399 ChimerSeq STARFusion TCGA_RNA-Seq FANCD2-MTMR14 FANCD2 chr3 10085548 + MTMR14 chr3 9724862 + Exonic hg19 BRCA TCGA-OL-A5D7-01A 4 2 In-Frame Intra-chr p25.3 Oncogene p25.3 Seq+ 24400 ChimerSeq STARFusion TCGA_RNA-Seq SUCO-ZCWPW2 SUCO chr1 172560211 + ZCWPW2 chr3 28476601 + Exonic hg19 BRCA TCGA-OL-A5D7-01A 2 8 Out-of-frame Inter-chr q24.3 p24.1 Seq+ 24401 ChimerSeq STARFusion TCGA_RNA-Seq LINC00674-PITPNC1 LINC00674 chr17 66099199 + PITPNC1 chr17 65548373 + Exonic hg19 BRCA TCGA-OL-A5D7-01A 2 6 Out-of-frame Intra-chr q24.2 q24.2 24402 ChimerSeq STARFusion TCGA_RNA-Seq TRIM2-CHD4 TRIM2 chr4 154074422 + CHD4 chr12 6688083 - Exonic hg19 BRCA TCGA-OL-A5D7-01A 2 6 5'UTR-CDS Inter-chr q31.3 p13.31 Seq+ 24403 ChimerSeq STARFusion TCGA_RNA-Seq RPAIN-FHIT RPAIN chr17 5326149 + FHIT chr3 59908140 - Exonic hg19 BRCA TCGA-A7-A0CJ-01A 6 78 Out-of-frame Inter-chr p13.2 p14.2 Tumor suppressor gene Seq+ 24404 ChimerSeq STARFusion TCGA_RNA-Seq RPAIN-FHIT RPAIN chr17 5326149 + FHIT chr3 59738047 - Exonic hg19 BRCA TCGA-A7-A0CJ-01A 5 78 Out-of-frame Inter-chr p13.2 p14.2 Tumor suppressor gene Seq+ 24405 ChimerSeq STARFusion TCGA_RNA-Seq RPAIN-FHIT RPAIN chr17 5326149 + FHIT chr3 59999990 - Exonic hg19 BRCA TCGA-A7-A0CJ-01A 3 78 5'UTR-CDS Inter-chr p13.2 p14.2 Tumor suppressor gene Seq+ 24406 ChimerSeq STARFusion TCGA_RNA-Seq RPAIN-FHIT RPAIN chr17 5326149 + FHIT chr3 59999878 - Exonic hg19 BRCA TCGA-A7-A0CJ-01A 2 78 In-Frame Inter-chr p13.2 p14.2 Tumor suppressor gene Seq+ 24407 ChimerSeq STARFusion TCGA_RNA-Seq TET1-ASCC1 TET1 chr10 70360791 + ASCC1 chr10 73921432 - Exonic hg19 BRCA TCGA-A7-A0CJ-01A 8 8 In-Frame Intra-chr q21.3 Oncogene Transcription factor q22.1 Seq+ 24408 ChimerSeq STARFusion TCGA_RNA-Seq NINL-TGM2 NINL chr20 25491310 - TGM2 chr20 36758771 - Exonic hg19 BRCA TCGA-A7-A0CJ-01A 4 2 Out-of-frame Intra-chr p11.21 q11.23 Seq+ 24409 ChimerSeq STARFusion TCGA_RNA-Seq RNF121-FADS2 RNF121 chr11 71671937 + FADS2 chr11 61624483 + Exonic hg19 BRCA TCGA-E9-A1N5-01A 28 54 In-Frame Intra-chr q13.4 q12.2 Seq+ 24410 ChimerSeq STARFusion TCGA_RNA-Seq MTL5-HIPK3 MTL5 chr11 68480738 - HIPK3 chr11 33373154 + Exonic hg19 BRCA TCGA-E9-A1N5-01A 2 11 Out-of-frame Intra-chr p13 CMGC:DYRK Seq+ 24411 ChimerSeq STARFusion TCGA_RNA-Seq WDR74-RN7SL2 WDR74 chr11 62609175 - RN7SL2 chr14 50329362 - Exonic hg19 BRCA TCGA-AC-A3OD-01A 44 67 Out-of-frame Inter-chr q12.3 q21.3 24412 ChimerSeq STARFusion TCGA_RNA-Seq NEU3-NDUFV1 NEU3 chr11 74700199 + NDUFV1 chr11 67375871 + Exonic hg19 BRCA TCGA-AC-A3OD-01A 6 41 Out-of-frame Intra-chr q13.4 q13.2 Seq+ 24413 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL2-WDR74 RN7SL2 chr14 50329359 - WDR74 chr11 62609170 - Exonic hg19 BRCA TCGA-AC-A3OD-01A 6 22 Out-of-frame Inter-chr q21.3 q12.3 24414 ChimerSeq STARFusion TCGA_RNA-Seq SNORA50-CNOT1 SNORA50 chr16 58593708 - CNOT1 chr16 58594266 - Exonic hg19 BRCA TCGA-AC-A3OD-01A 6 21 3'UTR-CDS Intra-chr q23.3 q21 24415 ChimerSeq STARFusion TCGA_RNA-Seq SNORD3C-RPPH1 SNORD3C chr17 19093371 - RPPH1 chr14 20811436 - Exonic hg19 BRCA TCGA-AC-A3OD-01A 5 16 Out-of-frame Inter-chr p11.2 q11.2 24416 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL2-WDR74 RN7SL2 chr14 50320423 - WDR74 chr11 62609169 - Exonic hg19 BRCA TCGA-AC-A3OD-01A 3 22 Out-of-frame Inter-chr q21.3 q12.3 24417 ChimerSeq STARFusion TCGA_RNA-Seq SNORD3C-RPPH1 SNORD3C chr17 19015762 - RPPH1 chr14 20811436 - Exonic hg19 BRCA TCGA-AC-A3OD-01A 4 16 Out-of-frame Inter-chr p11.2 q11.2 24418 ChimerSeq STARFusion TCGA_RNA-Seq NME2-CEP112 NME2 chr17 49243858 + CEP112 chr17 63637183 - Exonic hg19 BRCA TCGA-AO-A0JM-01A 6 99 5'UTR-CDS Intra-chr q21.33 Transcription factor q24.1 Seq+ 24419 ChimerSeq STARFusion TCGA_RNA-Seq NME2-CEP112 NME2 chr17 49243042 + CEP112 chr17 63637183 - Exonic hg19 BRCA TCGA-AO-A0JM-01A 2 99 5'UTR-CDS Intra-chr q21.33 Transcription factor q24.1 Seq+ 24420 ChimerSeq STARFusion TCGA_RNA-Seq DCUN1D1-CCDC50 DCUN1D1 chr3 182679014 - CCDC50 chr3 191074877 + Exonic hg19 BRCA TCGA-AO-A0JM-01A 14 17 In-Frame Intra-chr q26.33 Oncogene q28 Seq+ 24421 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP8-LINC00673 ARHGAP8 chr22 45182486 + LINC00673 chr17 70424439 - Exonic hg19 BRCA TCGA-AO-A0JM-01A 6 29 Out-of-frame Inter-chr q13.31 24422 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP8-LINC00673 ARHGAP8 chr22 45182486 + LINC00673 chr17 70427365 - Exonic hg19 BRCA TCGA-AO-A0JM-01A 2 29 Out-of-frame Inter-chr q13.31 24423 ChimerSeq STARFusion TCGA_RNA-Seq TRIM25-TBX4 TRIM25 chr17 54969379 - TBX4 chr17 59560261 + Exonic hg19 BRCA TCGA-AO-A0JM-01A 4 18 Out-of-frame Intra-chr q22 q23.2 Transcription factor Seq+ 24424 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-ARL5C ERBB2 chr17 37868701 + ARL5C chr17 37321392 - Exonic hg19 BRCA TCGA-AO-A0JM-01A 7 1 Out-of-frame Intra-chr q12 Oncogene q12 Seq+ 24425 ChimerSeq STARFusion TCGA_RNA-Seq NAALADL2-PEX5L NAALADL2 chr3 175189546 + PEX5L chr3 179537764 - Exonic hg19 BRCA TCGA-AO-A0JM-01A 4 13 In-Frame Intra-chr q26.31 q26.33 Seq+ 24426 ChimerSeq STARFusion TCGA_RNA-Seq LLGL2-CA10 LLGL2 chr17 73567181 + CA10 chr17 49825178 - Exonic hg19 BRCA TCGA-AO-A0JM-01A 2 14 Out-of-frame Intra-chr q25.1 q22 Seq+ 24427 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF38-PPA2 ARHGEF38 chr4 106474118 + PPA2 chr4 106320321 - Exonic hg19 BRCA TCGA-AO-A0JM-01A 2 1 In-Frame Intra-chr q24 q24 Seq+ 24428 ChimerSeq STARFusion TCGA_RNA-Seq NPNT-TBCK NPNT chr4 106819158 + TBCK chr4 107114927 - Exonic hg19 BRCA TCGA-AO-A0JM-01A 2 1 In-Frame Intra-chr q24 q24 Other:TBCK 24429 ChimerSeq STARFusion TCGA_RNA-Seq USP13-MIEN1 USP13 chr3 179371181 + MIEN1 chr17 37886544 - Exonic hg19 BRCA TCGA-AO-A0JM-01A 2 1 Out-of-frame Inter-chr q26.33 q12 24430 ChimerSeq STARFusion TCGA_RNA-Seq WRN-CHRNA2 WRN chr8 30891489 + CHRNA2 chr8 27328711 - Exonic hg19 BRCA TCGA-BH-A0BT-01A 2 1 5'UTR-5'UTR Intra-chr p12 Oncogene p21.2 24431 ChimerSeq STARFusion TCGA_RNA-Seq TMED3-KIAA1024 TMED3 chr15 79606347 + KIAA1024 chr15 79748440 + Exonic hg19 BRCA TCGA-A8-A07E-01A 3 3 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 24432 ChimerSeq STARFusion TCGA_RNA-Seq CANT1-RNF213 CANT1 chr17 77005746 - RNF213 chr17 78348258 + Exonic hg19 BRCA TCGA-A8-A07E-01A 3 2 5'UTR-CDS Intra-chr q25.3 q25.3 Oncogene 24433 ChimerSeq STARFusion TCGA_RNA-Seq RNF213-RHBDF2 RNF213 chr17 78343667 + RHBDF2 chr17 74483991 - Exonic hg19 BRCA TCGA-A8-A07E-01A 3 0 CDS-5'UTR Intra-chr q25.3 Oncogene q25.1 24434 ChimerSeq STARFusion TCGA_RNA-Seq PTPN9-AGBL1 PTPN9 chr15 75801258 - AGBL1 chr15 87217504 + Exonic hg19 BRCA TCGA-EW-A1P0-01A 16 29 In-Frame Intra-chr q24.2 q25.3 Seq+ 24435 ChimerSeq STARFusion TCGA_RNA-Seq GNB5-PDE6D GNB5 chr15 52433337 - PDE6D chr2 232603912 - Exonic hg19 BRCA TCGA-EW-A1P0-01A 8 45 Out-of-frame Inter-chr q21.2 q37.1 Seq+ 24436 ChimerSeq STARFusion TCGA_RNA-Seq SLIT3-HSD17B4 SLIT3 chr5 168310270 - HSD17B4 chr5 118792010 + Exonic hg19 BRCA TCGA-EW-A1P0-01A 2 31 In-Frame Intra-chr q35.1 q23.1 Seq+ 24437 ChimerSeq STARFusion TCGA_RNA-Seq MAP2K5-ADAMTSL3 MAP2K5 chr15 68040939 + ADAMTSL3 chr15 84373141 + Exonic hg19 BRCA TCGA-EW-A1P0-01A 3 16 In-Frame Intra-chr q23 STE:STE7 q25.2 Seq+ 24438 ChimerSeq STARFusion TCGA_RNA-Seq TMOD3-EIF4E2 TMOD3 chr15 52122033 + EIF4E2 chr2 233421126 + Exonic hg19 BRCA TCGA-EW-A1P0-01A 3 9 5'UTR-CDS Inter-chr q21.2 q37.1 Seq+ 24439 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-SLC35F1 PTPRK chr6 128385903 - SLC35F1 chr6 118475608 + Exonic hg19 BRCA TCGA-E9-A1N8-01A 5 37 Out-of-frame Intra-chr Tumor suppressor gene q22.2 Seq+ 24440 ChimerSeq STARFusion TCGA_RNA-Seq PEX7-TCF21 PEX7 chr6 137147607 + TCF21 chr6 134210556 + Exonic hg19 BRCA TCGA-E9-A1N8-01A 4 15 In-Frame Intra-chr q23.3 q23.2 Transcription factor Seq+ 24441 ChimerSeq STARFusion TCGA_RNA-Seq PEX7-TCF21 PEX7 chr6 137167319 + TCF21 chr6 134210556 + Exonic hg19 BRCA TCGA-E9-A1N8-01A 3 15 Out-of-frame Intra-chr q23.3 q23.2 Transcription factor Seq+ 24442 ChimerSeq STARFusion TCGA_RNA-Seq NOMO2-PRR14 NOMO2 chr16 18573198 - PRR14 chr16 30666672 + Exonic hg19 BRCA TCGA-E9-A1N8-01A 5 3 Out-of-frame Intra-chr p12.3 p11.2 Seq+ 24443 ChimerSeq STARFusion TCGA_RNA-Seq HEATR6-WEE1 HEATR6 chr17 58149576 - WEE1 chr11 9603079 + Exonic hg19 BRCA TCGA-E9-A1N8-01A 4 4 Out-of-frame Inter-chr q23.1 p15.4 Seq+ 24444 ChimerSeq STARFusion TCGA_RNA-Seq PIP5K1C-C3 PIP5K1C chr19 3647336 - C3 chr19 6719414 - Exonic hg19 BRCA TCGA-E9-A1N8-01A 2 12 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 24445 ChimerSeq STARFusion TCGA_RNA-Seq LOC100862671-GABBR2 LOC100862671 chr16 30753229 + GABBR2 chr9 101340354 - Exonic hg19 BRCA TCGA-E9-A1N8-01A 2 5 In-Frame Inter-chr q22.33 24446 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 BRCA TCGA-E9-A1N8-01A 2 3 3'UTR-5'UTR Intra-chr q34 24447 ChimerSeq STARFusion TCGA_RNA-Seq OPRD1-EPB41 OPRD1 chr1 29185815 + EPB41 chr1 29313960 + Exonic hg19 BRCA TCGA-E9-A1N8-01A 2 2 CDS-5'UTR Intra-chr p35.3 p35.3 Tumor suppressor gene 24448 ChimerSeq STARFusion TCGA_RNA-Seq NCOA1-GOLGB1 NCOA1 chr2 24896332 + GOLGB1 chr3 121388202 - Exonic hg19 BRCA TCGA-OL-A5RW-01A 30 83 In-Frame Inter-chr p23.3 Oncogene Transcription factor q13.33 Seq+ 24449 ChimerSeq STARFusion TCGA_RNA-Seq ARMC9-TM4SF4 ARMC9 chr2 232160966 + TM4SF4 chr3 149216607 + Exonic hg19 BRCA TCGA-OL-A5RW-01A 8 38 Out-of-frame Inter-chr q37.1 q25.1 Seq+ 24450 ChimerSeq STARFusion TCGA_RNA-Seq FBXL18-RNF216 FBXL18 chr7 5530862 - RNF216 chr7 5681007 - Exonic hg19 BRCA TCGA-OL-A5RW-01A 2 4 In-Frame Intra-chr p22.1 p22.1 KB Seq+ 24451 ChimerSeq STARFusion TCGA_RNA-Seq GALK2-MAPK6 GALK2 chr15 49462572 + MAPK6 chr15 52350830 + Exonic hg19 BRCA TCGA-OL-A5RW-01A 2 2 Out-of-frame Intra-chr q21.1 q21.2 Seq+ 24452 ChimerSeq STARFusion TCGA_RNA-Seq MIR31HG-CDKN2A MIR31HG chr9 21559488 - CDKN2A chr9 21971207 - Exonic hg19 BRCA TCGA-OL-A5RW-01A 2 2 3'UTR-3'UTR Intra-chr p21.3 p21.3 Oncogene Tumor suppressor gene 24453 ChimerSeq STARFusion TCGA_RNA-Seq ASL-GUSB ASL chr7 65541080 + GUSB chr7 65432894 - Exonic hg19 BRCA TCGA-OL-A5RW-01A 2 1 In-Frame Intra-chr q11.21 q11.21 Seq+ 24454 ChimerSeq STARFusion TCGA_RNA-Seq ZNF226-TOMM7 ZNF226 chr19 44677105 + TOMM7 chr7 22857667 - Exonic hg19 BRCA TCGA-OL-A5RW-01A 2 1 In-Frame Inter-chr q13.31 Transcription factor p15.3 24455 ChimerSeq STARFusion TCGA_RNA-Seq NUMA1-AATF NUMA1 chr11 71780888 - AATF chr17 35343916 + Exonic hg19 BRCA TCGA-A8-A08S-01A 95 217 5'UTR-CDS Inter-chr q13.4 Oncogene Seq+ 24456 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-MYO1D FBXL20 chr17 37457254 - MYO1D chr17 31107802 - Exonic hg19 BRCA TCGA-A8-A08S-01A 10 19 Out-of-frame Intra-chr q12 q11.2 Seq+ 24457 ChimerSeq STARFusion TCGA_RNA-Seq RFFL-NR1D1 RFFL chr17 33416124 - NR1D1 chr17 38256519 - Exonic hg19 BRCA TCGA-A8-A08S-01A 7 11 3'UTR-5'UTR Intra-chr q12 q21.1 Transcription factor Seq+ 24458 ChimerSeq STARFusion TCGA_RNA-Seq LRTOMT-UVRAG LRTOMT chr11 71791931 + UVRAG chr11 75718578 + Exonic hg19 BRCA TCGA-A8-A08S-01A 7 6 5'UTR-CDS Intra-chr q13.4 q13.5 Tumor suppressor gene Seq+ 24459 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF2-CLYBL TM9SF2 chr13 100201476 + CLYBL chr13 100425078 + Exonic hg19 BRCA TCGA-A7-A4SC-01A 3 27 In-Frame Intra-chr q32.3 q32.3 Seq+ 24460 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF2-CLYBL TM9SF2 chr13 100204580 + CLYBL chr13 100425078 + Exonic hg19 BRCA TCGA-A7-A4SC-01A 3 27 Out-of-frame Intra-chr q32.3 q32.3 Seq+ 24461 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-CCDC170 ESR1 chr6 152023140 + CCDC170 chr6 151917470 + Exonic hg19 BRCA TCGA-A7-A4SC-01A 4 7 5'UTR-CDS Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 KB Pub Seq+ 24462 ChimerSeq STARFusion TCGA_RNA-Seq RANBP10-RRP15 RANBP10 chr16 67839331 - RRP15 chr1 218504290 + Exonic hg19 BRCA TCGA-E2-A109-01A 103 240 Out-of-frame Inter-chr q22.1 q41 Seq+ 24463 ChimerSeq STARFusion TCGA_RNA-Seq EVPL-MAP2K6 EVPL chr17 74023182 - MAP2K6 chr17 67501921 + Exonic hg19 BRCA TCGA-E2-A109-01A 27 78 Out-of-frame Intra-chr q25.1 q24.3 STE:STE7 Seq+ 24464 ChimerSeq STARFusion TCGA_RNA-Seq NXT1-VPS16 NXT1 chr20 23331698 + VPS16 chr20 2840365 + Exonic hg19 BRCA TCGA-E2-A109-01A 26 56 5'UTR-CDS Intra-chr p11.21 p13 Seq+ 24465 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-PAK1 UVRAG chr11 75827059 + PAK1 chr11 77034405 - Exonic hg19 BRCA TCGA-E2-A109-01A 11 56 Out-of-frame Intra-chr q13.5 Tumor suppressor gene q14.1 STE:STE20 Seq+ 24466 ChimerSeq STARFusion TCGA_RNA-Seq ACER3-UVRAG ACER3 chr11 76730820 + UVRAG chr11 75826968 + Exonic hg19 BRCA TCGA-E2-A109-01A 16 34 In-Frame Intra-chr q13.5 q13.5 Tumor suppressor gene Seq+ 24467 ChimerSeq STARFusion TCGA_RNA-Seq USP43-ENDOV USP43 chr17 9605017 + ENDOV chr17 78398832 + Exonic hg19 BRCA TCGA-E2-A109-01A 10 21 Out-of-frame Intra-chr p13.1 q25.3 Seq+ 24468 ChimerSeq STARFusion TCGA_RNA-Seq C2CD3-P2RY6 C2CD3 chr11 73829273 - P2RY6 chr11 73007530 + Exonic hg19 BRCA TCGA-E2-A109-01A 9 21 CDS-5'UTR Intra-chr q13.4 q13.4 Seq+ 24469 ChimerSeq STARFusion TCGA_RNA-Seq CENPV-FERMT1 CENPV chr17 16247911 - FERMT1 chr20 6096691 - Exonic hg19 BRCA TCGA-E2-A109-01A 8 18 In-Frame Inter-chr p11.2 p12.3 Seq+ 24470 ChimerSeq STARFusion TCGA_RNA-Seq CES2-GPATCH2 CES2 chr16 66972144 + GPATCH2 chr1 217622679 - Exonic hg19 BRCA TCGA-E2-A109-01A 8 12 In-Frame Inter-chr q22.1 q41 Seq+ 24471 ChimerSeq STARFusion TCGA_RNA-Seq VPS35-SLC6A2 VPS35 chr16 46702842 - SLC6A2 chr16 55690556 + Exonic hg19 BRCA TCGA-E2-A109-01A 5 20 CDS-5'UTR Intra-chr q11.2 q12.2 Seq+ 24472 ChimerSeq STARFusion TCGA_RNA-Seq FERMT1-CDRT4 FERMT1 chr20 6096458 - CDRT4 chr17 15341517 - Exonic hg19 BRCA TCGA-E2-A109-01A 6 14 In-Frame Inter-chr p12.3 p12 Seq+ 24473 ChimerSeq STARFusion TCGA_RNA-Seq FERMT1-TVP23C FERMT1 chr20 6096458 - TVP23C chr17 15341517 - Exonic hg19 BRCA TCGA-E2-A109-01A 6 9 Out-of-frame Inter-chr p12.3 p12 24474 ChimerSeq STARFusion TCGA_RNA-Seq LRRC59-B4GALNT2 LRRC59 chr17 48469759 - B4GALNT2 chr17 47218609 + Exonic hg19 BRCA TCGA-E2-A109-01A 5 13 Out-of-frame Intra-chr q21.33 q21.32 Seq+ 24475 ChimerSeq STARFusion TCGA_RNA-Seq C2CD3-P2RY6 C2CD3 chr11 73829273 - P2RY6 chr11 73006775 + Exonic hg19 BRCA TCGA-E2-A109-01A 2 21 CDS-5'UTR Intra-chr q13.4 q13.4 Seq+ 24476 ChimerSeq STARFusion TCGA_RNA-Seq FERMT1-CDRT4 FERMT1 chr20 6096458 - CDRT4 chr17 15343599 - Exonic hg19 BRCA TCGA-E2-A109-01A 3 14 CDS-5'UTR Inter-chr p12.3 p12 Seq+ 24477 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-FRMD8 PPFIA1 chr11 70118542 + FRMD8 chr11 65161044 + Exonic hg19 BRCA TCGA-E2-A109-01A 2 14 Out-of-frame Intra-chr q13.3 q13.1 Seq+ 24478 ChimerSeq STARFusion TCGA_RNA-Seq YPEL2-HSPA12B YPEL2 chr17 57409185 + HSPA12B chr20 3730616 + Exonic hg19 BRCA TCGA-E2-A109-01A 3 9 5'UTR-CDS Inter-chr q22 p13 Seq+ 24479 ChimerSeq STARFusion TCGA_RNA-Seq HACE1-FBLN1 HACE1 chr6 105280917 - FBLN1 chr22 45914562 + Exonic hg19 BRCA TCGA-E2-A109-01A 2 10 Out-of-frame Inter-chr q16.3 Tumor suppressor gene q13.31 Tumor suppressor gene Seq+ 24480 ChimerSeq STARFusion TCGA_RNA-Seq EFNA4-C20orf96 EFNA4 chr1 155039916 + C20orf96 chr20 264722 - Exonic hg19 BRCA TCGA-E2-A109-01A 2 8 In-Frame Inter-chr q21.3 p13 Seq+ 24481 ChimerSeq STARFusion TCGA_RNA-Seq ZNF274-CACNA2D4 ZNF274 chr19 58721439 + CACNA2D4 chr12 1996235 - Exonic hg19 BRCA TCGA-AC-A2FM-01A 15 58 Out-of-frame Inter-chr q13.43 Transcription factor p13.33 Seq+ 24482 ChimerSeq STARFusion TCGA_RNA-Seq LPHN1-PODNL1 LPHN1 chr19 14316797 - PODNL1 chr19 14048819 - Exonic hg19 BRCA TCGA-AC-A2FM-01A 10 49 5'UTR-CDS Intra-chr p13.12 Seq+ 24483 ChimerSeq STARFusion TCGA_RNA-Seq TPM4-LRRC25 TPM4 chr19 16192856 + LRRC25 chr19 18502935 - Exonic hg19 BRCA TCGA-AC-A2FM-01A 4 10 In-Frame Intra-chr p13.12 p13.11 Seq+ 24484 ChimerSeq STARFusion TCGA_RNA-Seq SLC35E1-CYP4F22 SLC35E1 chr19 16677343 - CYP4F22 chr19 15634504 + Exonic hg19 BRCA TCGA-AC-A2FM-01A 3 13 CDS-5'UTR Intra-chr p13.11 p13.12 Seq+ 24485 ChimerSeq STARFusion TCGA_RNA-Seq PIAS2-ST8SIA5 PIAS2 chr18 44407922 - ST8SIA5 chr18 44284627 - Exonic hg19 BRCA TCGA-AC-A2FM-01A 3 2 In-Frame Intra-chr q21.1 q21.1 Seq+ 24486 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-INPPL1 CTTN chr11 70279907 + INPPL1 chr11 71943775 + Exonic hg19 BRCA TCGA-PE-A5DC-01A 26 107 Out-of-frame Intra-chr q13.3 q13.4 Seq+ 24487 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2IP-NLN ERBB2IP chr5 65222634 + NLN chr5 65105342 + Exonic hg19 BRCA TCGA-PE-A5DC-01A 29 72 5'UTR-CDS Intra-chr q12.3 Seq+ 24488 ChimerSeq STARFusion TCGA_RNA-Seq MGAT4A-KIAA1211L MGAT4A chr2 99342702 - KIAA1211L chr2 99448975 - Exonic hg19 BRCA TCGA-PE-A5DC-01A 2 46 Out-of-frame Intra-chr q11.2 q11.2 24489 ChimerSeq STARFusion TCGA_RNA-Seq MGAT4A-KIAA1211L MGAT4A chr2 99342702 - KIAA1211L chr2 99449460 - Exonic hg19 BRCA TCGA-PE-A5DC-01A 2 46 Out-of-frame Intra-chr q11.2 q11.2 24490 ChimerSeq STARFusion TCGA_RNA-Seq PAPOLA-GALNT5 PAPOLA chr14 96968937 + GALNT5 chr2 158140794 + Exonic hg19 BRCA TCGA-PE-A5DC-01A 7 13 In-Frame Inter-chr q32.2 q24.1 Seq+ 24491 ChimerSeq STARFusion TCGA_RNA-Seq AGAP1-MATN2 AGAP1 chr2 236877267 + MATN2 chr8 98954005 + Exonic hg19 BRCA TCGA-PE-A5DC-01A 2 25 In-Frame Inter-chr q37.2 q22.1 Seq+ 24492 ChimerSeq STARFusion TCGA_RNA-Seq LRP5-ALKBH5 LRP5 chr11 68080273 + ALKBH5 chr17 18098269 + Exonic hg19 BRCA TCGA-PE-A5DC-01A 5 6 Out-of-frame Inter-chr q13.2 p11.2 Seq+ 24493 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHB1-PACS1 PLEKHB1 chr11 73362935 + PACS1 chr11 65960957 + Exonic hg19 BRCA TCGA-PE-A5DC-01A 4 7 In-Frame Intra-chr q13.4 q13.1 Seq+ 24494 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-RNF8 ZFAND3 chr6 37787792 + RNF8 chr6 37328222 + Exonic hg19 BRCA TCGA-PE-A5DC-01A 2 14 Out-of-frame Intra-chr p21.2 p21.2 Tumor suppressor gene Seq+ 24495 ChimerSeq STARFusion TCGA_RNA-Seq ZNF286B-ALKBH5 ZNF286B chr17 18584054 - ALKBH5 chr17 18098269 + Exonic hg19 BRCA TCGA-PE-A5DC-01A 2 14 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 24496 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD46-TMEM222 ANKRD46 chr8 101571939 - TMEM222 chr1 27657211 + Exonic hg19 BRCA TCGA-AN-A04D-01A 34 57 5'UTR-5'UTR Inter-chr q22.3 p36.11 Seq+ 24497 ChimerSeq STARFusion TCGA_RNA-Seq N4BP2L2-ZAR1L N4BP2L2 chr13 33101545 - ZAR1L chr13 32878159 - Exonic hg19 BRCA TCGA-AN-A04D-01A 9 40 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 24498 ChimerSeq STARFusion TCGA_RNA-Seq EEF1DP3-CLDN10 EEF1DP3 chr13 32421076 + CLDN10 chr13 96212386 + Exonic hg19 BRCA TCGA-AN-A04D-01A 10 16 5'UTR-CDS Intra-chr q13.1 q32.1 Seq+ 24499 ChimerSeq STARFusion TCGA_RNA-Seq GCN1L1-NRTN GCN1L1 chr12 120580311 - NRTN chr19 5823779 + Exonic hg19 BRCA TCGA-AN-A04D-01A 3 12 CDS-5'UTR Inter-chr p13.3 24500 ChimerSeq STARFusion TCGA_RNA-Seq TTC39B-LURAP1L TTC39B chr9 15307082 - LURAP1L chr9 12821385 + Exonic hg19 CESC TCGA-EK-A2PG-01A 17 88 In-Frame Intra-chr p22.3 p23 Seq+ 24501 ChimerSeq STARFusion TCGA_RNA-Seq TWF2-WDR82 TWF2 chr3 52273008 - WDR82 chr3 52291535 - Exonic hg19 CESC TCGA-EK-A2PG-01A 3 27 Out-of-frame Intra-chr p21.2 p21.2 Seq+ 24502 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1731-C11orf75 KIAA1731 chr11 93400973 + C11orf75 chr11 93212435 - Exonic hg19 CESC TCGA-EK-A2PG-01A 3 8 CDS-5'UTR Intra-chr Seq+ 24503 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-PPP1R1B ERBB2 chr17 37883800 + PPP1R1B chr17 37791860 + Exonic hg19 CESC TCGA-Q1-A73R-01A 4508 19965 In-Frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 24504 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-PPP1R1B ERBB2 chr17 37883256 + PPP1R1B chr17 37791860 + Exonic hg19 CESC TCGA-Q1-A73R-01A 703 19965 Out-of-frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 24505 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808947 + TACC3 chr4 1742621 + Exonic hg19 CESC TCGA-Q1-A73R-01A 6 16 Out-of-frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 24506 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-STARD3 GRB7 chr17 37894645 + STARD3 chr17 37813261 + Exonic hg19 CESC TCGA-Q1-A73R-01A 3 2 5'UTR-CDS Intra-chr q12 q12 Seq+ 24507 ChimerSeq STARFusion TCGA_RNA-Seq WBP1L-SUFU WBP1L chr10 104503900 + SUFU chr10 104375025 + Exonic hg19 CESC TCGA-FU-A3HZ-01A 3 17 Out-of-frame Intra-chr q24.32 q24.32 Oncogene Tumor suppressor gene Seq+ 24508 ChimerSeq STARFusion TCGA_RNA-Seq TRIAP1-COX6A1 TRIAP1 chr12 120884029 - COX6A1 chr12 120878257 + Exonic hg19 CESC TCGA-FU-A3HZ-01A 2 1 In-Frame Intra-chr q24.31 q24.31 24509 ChimerSeq STARFusion TCGA_RNA-Seq KRT5-GIPC1 KRT5 chr12 52908646 - GIPC1 chr19 14588944 - Exonic hg19 CESC TCGA-DR-A0ZM-01A 3 2 Out-of-frame Inter-chr q13.13 p13.12 24510 ChimerSeq STARFusion TCGA_RNA-Seq KRT16-AR KRT16 chr17 39766051 - AR chrX 66764978 + Exonic hg19 CESC TCGA-LP-A4AV-01A 8 0 Out-of-frame Inter-chr q21.2 q12 Oncogene Tumor suppressor gene Transcription factor 24511 ChimerSeq STARFusion TCGA_RNA-Seq BOLA2-CORO1A BOLA2 chr16 30204679 - CORO1A chr16 30196530 + Exonic hg19 CESC TCGA-EA-A5ZE-01A 3 42 CDS-5'UTR Intra-chr p11.2 p11.2 Seq+ 24512 ChimerSeq STARFusion TCGA_RNA-Seq BOLA2B-CORO1A BOLA2B chr16 30204679 - CORO1A chr16 30196530 + Exonic hg19 CESC TCGA-EA-A5ZE-01A 3 42 CDS-5'UTR Intra-chr p11.2 p11.2 24513 ChimerSeq STARFusion TCGA_RNA-Seq FAT1-SORBS2 FAT1 chr4 187524057 - SORBS2 chr4 186696520 - Exonic hg19 CESC TCGA-EA-A5ZE-01A 8 22 CDS-5'UTR Intra-chr q35.2 Tumor suppressor gene q35.1 Seq+ 24514 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 CESC TCGA-EA-A5ZE-01A 2 1 3'UTR-5'UTR Intra-chr q34 24515 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-ERBB2 GRB7 chr17 37897160 + ERBB2 chr17 37879791 + Exonic hg19 CESC TCGA-LP-A5U3-01A 45 1888 5'UTR-CDS Intra-chr q12 q12 Oncogene Seq+ 24516 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-ERBB2 GRB7 chr17 37898709 + ERBB2 chr17 37855790 + Exonic hg19 CESC TCGA-LP-A5U3-01A 28 1888 CDS-5'UTR Intra-chr q12 q12 Oncogene Seq+ 24517 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-ERBB2 GRB7 chr17 37898709 + ERBB2 chr17 37863243 + Exonic hg19 CESC TCGA-LP-A5U3-01A 25 1888 Out-of-frame Intra-chr q12 q12 Oncogene Seq+ 24518 ChimerSeq STARFusion TCGA_RNA-Seq NCOA3-ARHGAP26 NCOA3 chr20 46256767 + ARHGAP26 chr5 142601923 + Exonic hg19 CESC TCGA-LP-A5U3-01A 20 63 In-Frame Inter-chr q13.12 Transcription factor q31.3 Seq+ 24519 ChimerSeq STARFusion TCGA_RNA-Seq HSD17B4-TNFAIP8 HSD17B4 chr5 118792063 + TNFAIP8 chr5 118728511 + Exonic hg19 CESC TCGA-JW-A5VL-01A 19 91 In-Frame Intra-chr q23.1 q23.1 Seq+ 24520 ChimerSeq STARFusion TCGA_RNA-Seq SFN-YWHAG SFN chr1 27190112 + YWHAG chr7 75959255 - Exonic hg19 CESC TCGA-JW-A5VL-01A 3 1 Out-of-frame Inter-chr p36.11 Tumor suppressor gene q11.23 24521 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1432-PFN2 KIAA1432 chr9 5629453 + PFN2 chr3 149686337 - Exonic hg19 CESC TCGA-EA-A1QT-01A 21 90 In-Frame Inter-chr q25.1 Seq+ 24522 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1432-PFN2 KIAA1432 chr9 5714003 + PFN2 chr3 149686337 - Exonic hg19 CESC TCGA-EA-A1QT-01A 3 90 Out-of-frame Inter-chr q25.1 Seq+ 24523 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1432-MLANA KIAA1432 chr9 5714003 + MLANA chr9 5892450 + Exonic hg19 CESC TCGA-EA-A1QT-01A 2 15 CDS-5'UTR Intra-chr p24.1 24524 ChimerSeq STARFusion TCGA_RNA-Seq NDUFV1-DOC2GP NDUFV1 chr11 67379040 + DOC2GP chr11 67381082 - Exonic hg19 CESC TCGA-EA-A1QT-01A 3 11 CDS-3'UTR Intra-chr q13.2 q13.2 24525 ChimerSeq STARFusion TCGA_RNA-Seq PILRB-PVRIG PILRB chr7 99943591 + PVRIG chr7 99816872 + Exonic hg19 CESC TCGA-EA-A1QT-01A 3 0 5'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 24526 ChimerSeq STARFusion TCGA_RNA-Seq PAPOLA-NPAS3 PAPOLA chr14 96968937 + NPAS3 chr14 34145417 + Exonic hg19 CESC TCGA-EK-A2R7-01A 3 7 Out-of-frame Intra-chr q32.2 q13.1 Transcription factor Seq+ 24527 ChimerSeq STARFusion TCGA_RNA-Seq NR2F2-B2M NR2F2 chr15 96869581 + B2M chr15 45007621 + Exonic hg19 CESC TCGA-EK-A2R7-01A 4 1 In-Frame Intra-chr q26.2 Transcription factor Oncogene 24528 ChimerSeq STARFusion TCGA_RNA-Seq NDUFA1-HDAC11 NDUFA1 chrX 119007344 + HDAC11 chr3 13521833 + Exonic hg19 CESC TCGA-EK-A2R7-01A 3 1 Out-of-frame Inter-chr q24 p25.1 24529 ChimerSeq STARFusion TCGA_RNA-Seq MCM6-RAB3GAP1 MCM6 chr2 136622583 - RAB3GAP1 chr2 135887565 + Exonic hg19 CESC TCGA-EK-A2R7-01A 2 1 In-Frame Intra-chr q21.3 q21.3 Seq+ 24530 ChimerSeq STARFusion TCGA_RNA-Seq NFIC-LSM7 NFIC chr19 3435205 + LSM7 chr19 2324195 - Exonic hg19 CESC TCGA-DS-A1OD-01A 62 263 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 24531 ChimerSeq STARFusion TCGA_RNA-Seq FZR1-GNG7 FZR1 chr19 3506472 + GNG7 chr19 2520723 - Exonic hg19 CESC TCGA-DS-A1OD-01A 41 242 5'UTR-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 24532 ChimerSeq STARFusion TCGA_RNA-Seq VAMP1-CD27 VAMP1 chr12 6579696 - CD27 chr12 6554590 + Exonic hg19 CESC TCGA-DS-A1OD-01A 11 33 CDS-3'UTR Intra-chr p13.31 p13.31 Seq+ 24533 ChimerSeq STARFusion TCGA_RNA-Seq FZR1-NFIC FZR1 chr19 3506472 + NFIC chr19 3381710 + Exonic hg19 CESC TCGA-DS-A1OD-01A 9 10 5'UTR-CDS Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Transcription factor Seq+ 24534 ChimerSeq STARFusion TCGA_RNA-Seq PGD-PEX14 PGD chr1 10460629 + PEX14 chr1 10596270 + Exonic hg19 CESC TCGA-DS-A1OD-01A 2 3 In-Frame Intra-chr p36.22 p36.22 Seq+ 24535 ChimerSeq STARFusion TCGA_RNA-Seq ESYT2-SGK223 ESYT2 chr7 158621780 - SGK223 chr8 8197151 - Exonic hg19 CESC TCGA-DS-A1OD-01A 2 0 Out-of-frame Inter-chr q36.3 24536 ChimerSeq STARFusion TCGA_RNA-Seq TRA2A-AQP1 TRA2A chr7 23571408 - AQP1 chr7 30961681 + Exonic hg19 CESC TCGA-EK-A2PM-01A 74 177 In-Frame Intra-chr p15.3 p14.3 Seq+ 24537 ChimerSeq STARFusion TCGA_RNA-Seq CCDC113-CPNE2 CCDC113 chr16 58301490 + CPNE2 chr16 57179997 + Exonic hg19 CESC TCGA-EK-A2PM-01A 6 15 In-Frame Intra-chr q21 q13 Seq+ 24538 ChimerSeq STARFusion TCGA_RNA-Seq MYH11-YME1L1 MYH11 chr16 15820705 - YME1L1 chr10 27437969 - Exonic hg19 CESC TCGA-EK-A2PM-01A 5 6 In-Frame Inter-chr Oncogene p12.1 Seq+ 24539 ChimerSeq STARFusion TCGA_RNA-Seq TANC1-MARCH7 TANC1 chr2 159857701 + 2019_ 3_ 7_ chr2 160585520 + Exonic hg19 CESC TCGA-EK-A2PM-01A 2 6 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 24540 ChimerSeq STARFusion TCGA_RNA-Seq MTMR12-CDH18 MTMR12 chr5 32239107 - CDH18 chr5 19520887 - Exonic hg19 CESC TCGA-EK-A3GM-01A 2 7 Out-of-frame Intra-chr p13.3 p14.3 Seq+ 24541 ChimerSeq STARFusion TCGA_RNA-Seq CTU1-TMEM143 CTU1 chr19 51607319 - TMEM143 chr19 48837454 - Exonic hg19 CESC TCGA-EK-A3GM-01A 3 2 Out-of-frame Intra-chr q13.41 q13.33 Seq+ 24542 ChimerSeq STARFusion TCGA_RNA-Seq RAB11A-PPP6R3 RAB11A chr15 66161963 + PPP6R3 chr11 68377372 + Exonic hg19 CESC TCGA-ZJ-A8QR-01A 31 150 Out-of-frame Inter-chr q22.31 q13.2 Seq+ 24543 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 CESC TCGA-EX-A69L-01A 2 4 3'UTR-5'UTR Intra-chr q34 24544 ChimerSeq STARFusion TCGA_RNA-Seq AGSK1-LOC388152 AGSK1 chr15 82764746 - LOC388152 chr15 84868720 - Exonic hg19 CESC TCGA-EK-A2RK-01A 4 8 Out-of-frame Intra-chr 24545 ChimerSeq STARFusion TCGA_RNA-Seq MPHOSPH8-PSPC1 MPHOSPH8 chr13 20224400 + PSPC1 chr13 20333558 - Exonic hg19 CESC TCGA-EK-A2RK-01A 2 1 Out-of-frame Intra-chr q12.11 q12.11 24546 ChimerSeq STARFusion TCGA_RNA-Seq MSH2-CCDC57 MSH2 chr2 47637511 + CCDC57 chr17 80121233 - Exonic hg19 CESC TCGA-ZJ-AB0I 6 6 Out-of-frame Inter-chr p21 Oncogene Tumor suppressor gene q25.3 Seq+ 24547 ChimerSeq STARFusion TCGA_RNA-Seq GNL1-SOCS1 GNL1 chr6 30520244 - SOCS1 chr16 11349385 - Exonic hg19 CESC TCGA-ZJ-AB0I 3 6 CDS-5'UTR Inter-chr p13.13 Oncogene Tumor suppressor gene Seq+ 24548 ChimerSeq STARFusion TCGA_RNA-Seq YAE1D1-GJC3 YAE1D1 chr7 39606146 + GJC3 chr7 99521226 - Exonic hg19 CESC TCGA-C5-A7UC-01A 4 16 Out-of-frame Intra-chr p14.1 q22.1 Seq+ 24549 ChimerSeq STARFusion TCGA_RNA-Seq ASCC1-MICU1 ASCC1 chr10 73956569 - MICU1 chr10 74135630 - Exonic hg19 CESC TCGA-C5-A7UC-01A 3 9 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 24550 ChimerSeq STARFusion TCGA_RNA-Seq STAT5A-LOC284100 STAT5A chr17 40442040 + LOC284100 chr17 36205003 - Exonic hg19 CESC TCGA-EK-A2RM-01A 18 135 CDS-3'UTR Intra-chr q21.2 Tumor suppressor gene Transcription factor 24551 ChimerSeq STARFusion TCGA_RNA-Seq SCMH1-SDCBP2 SCMH1 chr1 41707731 - SDCBP2 chr20 1301079 - Exonic hg19 CESC TCGA-EK-A2RM-01A 13 28 5'UTR-5'UTR Inter-chr p34.2 Transcription factor p13 Seq+ 24552 ChimerSeq STARFusion TCGA_RNA-Seq MIEN1-ERBB2 MIEN1 chr17 37885540 - ERBB2 chr17 37863243 + Exonic hg19 CESC TCGA-EK-A2RM-01A 9 28 3'UTR-CDS Intra-chr q12 q12 Oncogene 24553 ChimerSeq STARFusion TCGA_RNA-Seq AFF1-PTPN13 AFF1 chr4 88048855 + PTPN13 chr4 87718027 + Exonic hg19 CESC TCGA-EA-A5ZD 28 175 In-Frame Intra-chr q21.3 Oncogene q21.3 Tumor suppressor gene Seq+ 24554 ChimerSeq STARFusion TCGA_RNA-Seq PTPN13-AFF1 PTPN13 chr4 87610343 + AFF1 chr4 88005272 + Exonic hg19 CESC TCGA-EA-A5ZD 6 61 In-Frame Intra-chr q21.3 Tumor suppressor gene q21.3 Oncogene Seq+ 24555 ChimerSeq STARFusion TCGA_RNA-Seq PILRB-PVRIG PILRB chr7 99943591 + PVRIG chr7 99816872 + Exonic hg19 CESC TCGA-VS-A8EI-01A 5 1 5'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 24556 ChimerSeq STARFusion TCGA_RNA-Seq KCNC3-PRKDC KCNC3 chr19 50823850 - PRKDC chr8 48730122 - Exonic hg19 CESC TCGA-VS-A8EI-01A 3 3 In-Frame Inter-chr q13.33 q11.21 Oncogene Seq+ 24557 ChimerSeq STARFusion TCGA_RNA-Seq ITGA2-PARP8 ITGA2 chr5 52285362 + PARP8 chr5 50055477 + Exonic hg19 CESC TCGA-VS-A8EI-01A 2 5 In-Frame Intra-chr q11.2 q11.1 Seq+ 24558 ChimerSeq STARFusion TCGA_RNA-Seq LITAF-BCAR4 LITAF chr16 11680742 - BCAR4 chr16 11914154 - Exonic hg19 CESC TCGA-FU-A3EO-01A 17 7 5'UTR-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 24559 ChimerSeq STARFusion TCGA_RNA-Seq LOC100288778-WASH3P LOC100288778 chr12 89017 + WASH3P chr15 102515209 + Exonic hg19 CESC TCGA-EA-A3Y4-01A 10 19 Out-of-frame Inter-chr q26.3 24560 ChimerSeq STARFusion TCGA_RNA-Seq TMEM50B-XXYLT1 TMEM50B chr21 34852145 - XXYLT1 chr3 194790840 - Exonic hg19 CESC TCGA-C5-A1MK-01A 7 45 5'UTR-CDS Inter-chr q29 Seq+ 24561 ChimerSeq STARFusion TCGA_RNA-Seq ASXL1-BPIFB2 ASXL1 chr20 30946635 + BPIFB2 chr20 31596347 + Exonic hg19 CESC TCGA-C5-A1MK-01A 7 22 CDS-5'UTR Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 24562 ChimerSeq STARFusion TCGA_RNA-Seq C1orf177-TTC4 C1orf177 chr1 55273684 + TTC4 chr1 55203255 + Exonic hg19 CESC TCGA-C5-A1MK-01A 5 26 In-Frame Intra-chr p32.3 Tumor suppressor gene Seq+ 24563 ChimerSeq STARFusion TCGA_RNA-Seq ASXL1-BPIFB2 ASXL1 chr20 30946635 + BPIFB2 chr20 31596354 + Exonic hg19 CESC TCGA-C5-A1MK-01A 3 22 CDS-5'UTR Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 24564 ChimerSeq STARFusion TCGA_RNA-Seq ASXL1-BPIFB2 ASXL1 chr20 30946635 + BPIFB2 chr20 31600609 + Exonic hg19 CESC TCGA-C5-A1MK-01A 2 22 Out-of-frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 24565 ChimerSeq STARFusion TCGA_RNA-Seq TASP1-DHCR7 TASP1 chr20 13415691 - DHCR7 chr11 71152486 - Exonic hg19 CESC TCGA-C5-A1MK-01A 2 21 In-Frame Inter-chr p12.1 q13.4 Seq+ 24566 ChimerSeq STARFusion TCGA_RNA-Seq GON4L-SERPINB7 GON4L chr1 155783425 - SERPINB7 chr18 61449589 + Exonic hg19 CESC TCGA-C5-A1MK-01A 3 5 CDS-5'UTR Inter-chr q22 q21.33 Seq+ 24567 ChimerSeq STARFusion TCGA_RNA-Seq RUNDC1-RGS9 RUNDC1 chr17 41142453 + RGS9 chr17 63223393 + Exonic hg19 CESC TCGA-4J-AA1J-01A 10 30 Out-of-frame Intra-chr q21.31 q24.1 Seq+ 24568 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3B-EGFEM1P FNDC3B chr3 172028671 + EGFEM1P chr3 168237324 + Exonic hg19 CESC TCGA-4J-AA1J-01A 4 19 CDS-5'UTR Intra-chr q26.31 q26.2 24569 ChimerSeq STARFusion TCGA_RNA-Seq PTGES3L-RGS9 PTGES3L chr17 41131187 - RGS9 chr17 63206606 + Exonic hg19 CESC TCGA-4J-AA1J-01A 4 16 Out-of-frame Intra-chr q21.31 q24.1 Seq+ 24570 ChimerSeq STARFusion TCGA_RNA-Seq CDC27-C17orf53 CDC27 chr17 45219219 - C17orf53 chr17 42231924 + Exonic hg19 CESC TCGA-4J-AA1J-01A 3 6 In-Frame Intra-chr q21.32 q21.31 Seq+ 24571 ChimerSeq STARFusion TCGA_RNA-Seq NME6-SPINK8 NME6 chr3 48338217 - SPINK8 chr3 48351436 - Exonic hg19 CESC TCGA-C5-A1M6-01A 65 570 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 24572 ChimerSeq STARFusion TCGA_RNA-Seq NME6-SPINK8 NME6 chr3 48337609 - SPINK8 chr3 48351436 - Exonic hg19 CESC TCGA-C5-A1M6-01A 27 570 In-Frame Intra-chr p21.31 p21.31 Seq+ 24573 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890980 - BCAR4 chr16 11914154 - Exonic hg19 CESC TCGA-C5-A1M6-01A 10 52 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 24574 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890980 - BCAR4 chr16 11915612 - Exonic hg19 CESC TCGA-C5-A1M6-01A 5 52 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 24575 ChimerSeq STARFusion TCGA_RNA-Seq ALCAM-CBLB ALCAM chr3 105271429 + CBLB chr3 105495386 - Exonic hg19 CESC TCGA-C5-A1M6-01A 2 1 In-Frame Intra-chr q13.11 q13.11 24576 ChimerSeq STARFusion TCGA_RNA-Seq STAT3-KAT2A STAT3 chr17 40500407 - KAT2A chr17 40272847 - Exonic hg19 CESC TCGA-VS-A9UP 13 71 Out-of-frame Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q21.2 Seq+ 24577 ChimerSeq STARFusion TCGA_RNA-Seq PQLC1-RBFADN PQLC1 chr18 77710724 - RBFADN chr18 77837589 + Exonic hg19 CESC TCGA-VS-A9UP 3 5 Out-of-frame Intra-chr q23 q23 Seq+ 24578 ChimerSeq STARFusion TCGA_RNA-Seq MMD-APPBP2 MMD chr17 53499031 - APPBP2 chr17 58543820 - Exonic hg19 CESC TCGA-VS-A9UP 2 2 In-Frame Intra-chr q22 q23.2 Seq+ 24579 ChimerSeq STARFusion TCGA_RNA-Seq PTPN13-C4orf36 PTPN13 chr4 87656899 + C4orf36 chr4 87797596 - Exonic hg19 CESC TCGA-VS-A8QC-01A 94 197 CDS-3'UTR Intra-chr q21.3 Tumor suppressor gene q21.3 Seq+ 24580 ChimerSeq STARFusion TCGA_RNA-Seq FBXO42-EPHA2 FBXO42 chr1 16632298 - EPHA2 chr1 16451815 - Exonic hg19 CESC TCGA-VS-A8QC-01A 13 18 Out-of-frame Intra-chr p36.13 p36.13 Tumor suppressor gene Seq+ 24581 ChimerSeq STARFusion TCGA_RNA-Seq AGSK1-LOC388152 AGSK1 chr15 82764746 - LOC388152 chr15 84868720 - Exonic hg19 CESC TCGA-VS-A8QC-01A 7 12 Out-of-frame Intra-chr 24582 ChimerSeq STARFusion TCGA_RNA-Seq ABCA5-MBTD1 ABCA5 chr17 67290796 - MBTD1 chr17 49258055 - Exonic hg19 CESC TCGA-VS-A8QC-01A 5 10 In-Frame Intra-chr q24.3 q21.33 Seq+ 24583 ChimerSeq STARFusion TCGA_RNA-Seq MCM3-PKHD1 MCM3 chr6 52148092 - PKHD1 chr6 51918049 - Exonic hg19 CESC TCGA-VS-A8QC-01A 4 2 In-Frame Intra-chr p12.2 p12.2 Oncogene Seq+ 24584 ChimerSeq STARFusion TCGA_RNA-Seq MTA2-UBXN1 MTA2 chr11 62364788 - UBXN1 chr11 62446424 - Exonic hg19 CESC TCGA-VS-A952-01A 9 27 CDS-5'UTR Intra-chr q12.3 q12.3 Seq+ 24585 ChimerSeq STARFusion TCGA_RNA-Seq NFIX-MAST1 NFIX chr19 13136366 + MAST1 chr19 12975623 + Exonic hg19 CESC TCGA-VS-A952-01A 6 29 In-Frame Intra-chr p13.13 Transcription factor p13.13 AGC:MAST Seq+ 24586 ChimerSeq STARFusion TCGA_RNA-Seq WFDC2-AHCY WFDC2 chr20 44099172 + AHCY chr20 32883391 - Exonic hg19 CESC TCGA-VS-A952-01A 2 1 In-Frame Intra-chr q13.12 q11.22 24587 ChimerSeq STARFusion TCGA_RNA-Seq AGRN-SAMD11 AGRN chr1 983275 + SAMD11 chr1 878633 + Exonic hg19 CESC TCGA-DS-A1O9 13 46 In-Frame Intra-chr p36.33 p36.33 24588 ChimerSeq STARFusion TCGA_RNA-Seq SRSF7-HNRNPLL SRSF7 chr2 38973286 - HNRNPLL chr2 38829742 - Exonic hg19 CESC TCGA-DS-A1O9 8 22 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 24589 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125699 - CXCL16 chr17 4637313 - Exonic hg19 CESC TCGA-DS-A1O9 5 11 Out-of-frame Inter-chr q12.2 p13.2 24590 ChimerSeq STARFusion TCGA_RNA-Seq NIPAL3-GRHL3 NIPAL3 chr1 24771734 + GRHL3 chr1 24657916 + Exonic hg19 CESC TCGA-DS-A1O9 3 7 Out-of-frame Intra-chr p36.11 p36.11 Transcription factor Seq+ 24591 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1-FRMD8 SIPA1 chr11 65412600 + FRMD8 chr11 65178713 + Exonic hg19 CESC TCGA-DS-A1O9 3 7 In-Frame Intra-chr q13.1 q13.1 Seq+ 24592 ChimerSeq STARFusion TCGA_RNA-Seq SPOCK2-ASCC1 SPOCK2 chr10 73831902 - ASCC1 chr10 73857208 - Exonic hg19 CESC TCGA-EX-A8YF-01A 2 12 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 24593 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-PIP5K1P1 KCTD20 chr6 36457998 + PIP5K1P1 chr6 7987765 + Exonic hg19 CESC TCGA-MA-AA3X 16 0 Out-of-frame Intra-chr p21.31 p24.3 24594 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-MACROD2 ETV6 chr12 11905513 + MACROD2 chr20 14830550 + Exonic hg19 CESC TCGA-MA-AA3X 2 7 CDS-5'UTR Inter-chr p13.2 Tumor suppressor gene Transcription factor p12.1 Seq+ 24595 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-MACROD2 ETV6 chr12 11992238 + MACROD2 chr20 14830550 + Exonic hg19 CESC TCGA-MA-AA3X 2 7 CDS-5'UTR Inter-chr p13.2 Tumor suppressor gene Transcription factor p12.1 Seq+ 24596 ChimerSeq STARFusion TCGA_RNA-Seq GTF2I-AUTS2 GTF2I chr7 74157859 + AUTS2 chr7 69755354 + Exonic hg19 CESC TCGA-MA-AA3X 2 6 Out-of-frame Intra-chr q11.23 Transcription factor q11.22 24597 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD1-NCKAP1L FCHSD1 chr5 141029926 - NCKAP1L chr12 54936359 + Exonic hg19 CESC TCGA-VS-A9U7 21 46 In-Frame Inter-chr q31.3 q13.13 Seq+ 24598 ChimerSeq STARFusion TCGA_RNA-Seq PIAS4-CCDC94 PIAS4 chr19 4013347 + CCDC94 chr19 4267621 + Exonic hg19 CESC TCGA-C5-A1M7-01A 6 46 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 24599 ChimerSeq STARFusion TCGA_RNA-Seq SH3BP4-MST1R SH3BP4 chr2 235904020 + MST1R chr3 49936428 - Exonic hg19 CESC TCGA-DS-A7WH-01A 6 69 5'UTR-CDS Inter-chr q37.2 p21.31 Tumor suppressor gene Seq+ 24600 ChimerSeq STARFusion TCGA_RNA-Seq SH3BP4-MST1R SH3BP4 chr2 235904020 + MST1R chr3 49936696 - Exonic hg19 CESC TCGA-DS-A7WH-01A 6 69 5'UTR-CDS Inter-chr q37.2 p21.31 Tumor suppressor gene Seq+ 24601 ChimerSeq STARFusion TCGA_RNA-Seq SH3BP4-MST1R SH3BP4 chr2 235904020 + MST1R chr3 49936121 - Exonic hg19 CESC TCGA-DS-A7WH-01A 2 69 5'UTR-CDS Inter-chr q37.2 p21.31 Tumor suppressor gene Seq+ 24602 ChimerSeq STARFusion TCGA_RNA-Seq SPTBN1-EML6 SPTBN1 chr2 54786024 + EML6 chr2 55040369 + Exonic hg19 CESC TCGA-DS-A7WH-01A 5 25 Out-of-frame Intra-chr p16.2 Tumor suppressor gene p16.1 24603 ChimerSeq STARFusion TCGA_RNA-Seq ASXL1-EIF2S2 ASXL1 chr20 30956926 + EIF2S2 chr20 32693351 - Exonic hg19 CESC TCGA-DS-A7WH-01A 5 8 In-Frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.22 Seq+ 24604 ChimerSeq STARFusion TCGA_RNA-Seq ZRANB1-LHPP ZRANB1 chr10 126672257 + LHPP chr10 126301833 + Exonic hg19 CESC TCGA-DS-A7WH-01A 3 12 In-Frame Intra-chr q26.13 q26.13 Seq+ 24605 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57697534 + VMP1 chr17 57915656 + Exonic hg19 CESC TCGA-MA-AA3W-01A 33 109 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 24606 ChimerSeq STARFusion TCGA_RNA-Seq IRF1-LOC553103 IRF1 chr5 131822249 - LOC553103 chr5 131702473 - Exonic hg19 CESC TCGA-MA-AA3W-01A 10 43 CDS-3'UTR Intra-chr q31.1 Tumor suppressor gene Transcription factor 24607 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57744338 + VMP1 chr17 57886157 + Exonic hg19 CESC TCGA-C5-A1BJ-01A 6 6 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 24608 ChimerSeq STARFusion TCGA_RNA-Seq LDLR-SMARCA4 LDLR chr19 11218190 + SMARCA4 chr19 11168934 + Exonic hg19 CESC TCGA-C5-A1BJ-01A 4 7 Out-of-frame Intra-chr p13.2 p13.2 Oncogene Tumor suppressor gene Seq+ 24609 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-JUND RNA45S5 chrUn_gl000220 110197 + JUND chr19 18390852 - Exonic hg19 CESC TCGA-C5-A1BJ-01A 3 1 Out-of-frame Inter-chr p13.11 Transcription factor 24610 ChimerSeq STARFusion TCGA_RNA-Seq BIRC2-TMEM123 BIRC2 chr11 102239279 + TMEM123 chr11 102272937 - Exonic hg19 CESC TCGA-DS-A0VL-01A 134 527 5'UTR-CDS Intra-chr q22.2 Oncogene q22.2 Seq+ 24611 ChimerSeq STARFusion TCGA_RNA-Seq DYRK1A-APP DYRK1A chr21 38865465 + APP chr21 27284274 - Exonic hg19 CESC TCGA-DS-A0VL-01A 11 29 Out-of-frame Intra-chr q22.13 CMGC:DYRK q21.3 Seq+ 24612 ChimerSeq STARFusion TCGA_RNA-Seq USP25-CYYR1 USP25 chr21 17191165 + CYYR1 chr21 27840950 - Exonic hg19 CESC TCGA-DS-A0VL-01A 6 38 Out-of-frame Intra-chr q21.1 q21.3 Seq+ 24613 ChimerSeq STARFusion TCGA_RNA-Seq USP25-CYYR1 USP25 chr21 17191165 + CYYR1 chr21 27840953 - Exonic hg19 CESC TCGA-DS-A0VL-01A 4 38 Out-of-frame Intra-chr q21.1 q21.3 Seq+ 24614 ChimerSeq STARFusion TCGA_RNA-Seq SFN-YWHAG SFN chr1 27190112 + YWHAG chr7 75959255 - Exonic hg19 CESC TCGA-C5-A7UE-01A 6 1 Out-of-frame Inter-chr p36.11 Tumor suppressor gene q11.23 24615 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-NEUROD2 ERBB2 chr17 37856564 + NEUROD2 chr17 37764318 - Exonic hg19 CESC TCGA-VS-A9UL 19 116 CDS-5'UTR Intra-chr q12 Oncogene q12 Transcription factor Seq+ 24616 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-NEUROD2 ERBB2 chr17 37866134 + NEUROD2 chr17 37764318 - Exonic hg19 CESC TCGA-VS-A9UL 5 116 CDS-5'UTR Intra-chr q12 Oncogene q12 Transcription factor Seq+ 24617 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-NEUROD2 ERBB2 chr17 37851434 + NEUROD2 chr17 37764318 - Exonic hg19 CESC TCGA-VS-A9UL 3 116 5'UTR-5'UTR Intra-chr q12 Oncogene q12 Transcription factor Seq+ 24618 ChimerSeq STARFusion TCGA_RNA-Seq LITAF-BCAR4 LITAF chr16 11680742 - BCAR4 chr16 11914154 - Exonic hg19 CESC TCGA-VS-A9UL 2 2 5'UTR-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 24619 ChimerSeq STARFusion TCGA_RNA-Seq LOC646214-PAK2 LOC646214 chr15 21932723 - PAK2 chr3 196559159 + Exonic hg19 CESC TCGA-C5-A2LV-01A 4 19 Out-of-frame Inter-chr q29 STE:STE20 24620 ChimerSeq STARFusion TCGA_RNA-Seq LOC646214-PAK2 LOC646214 chr15 21932716 - PAK2 chr3 196559166 + Exonic hg19 CESC TCGA-C5-A2LV-01A 3 19 Out-of-frame Inter-chr q29 STE:STE20 24621 ChimerSeq STARFusion TCGA_RNA-Seq NARF-HEXDC NARF chr17 80426772 + HEXDC chr17 80397507 + Exonic hg19 CESC TCGA-VS-A8EK-01A 14 35 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 24622 ChimerSeq STARFusion TCGA_RNA-Seq TAF1D-RNPC3 TAF1D chr11 93470230 - RNPC3 chr1 104097656 + Exonic hg19 CESC TCGA-VS-A8EK-01A 2 0 CDS-3'UTR Inter-chr q21 p21.1 24623 ChimerSeq STARFusion TCGA_RNA-Seq YEATS4-PGAM1P5 YEATS4 chr12 69764755 + PGAM1P5 chr12 96043104 + Exonic hg19 CESC TCGA-EK-A3GN-01A 3 15 Out-of-frame Intra-chr q15 q22 Seq+ 24624 ChimerSeq STARFusion TCGA_RNA-Seq RFX2-PATL1 RFX2 chr19 6039991 - PATL1 chr11 59405884 - Exonic hg19 CESC TCGA-LP-A4AW-01A 2 1 Out-of-frame Inter-chr p13.3 Transcription factor q12.1 Seq+ 24625 ChimerSeq STARFusion TCGA_RNA-Seq EHMT1-GFI1B EHMT1 chr9 140513501 + GFI1B chr9 135862046 + Exonic hg19 CESC TCGA-C5-A7XC-01A 7 7 CDS-5'UTR Intra-chr q34.3 q34.13 Transcription factor Seq+ 24626 ChimerSeq STARFusion TCGA_RNA-Seq MIR1204-MYC MIR1204 chr8 128808254 + MYC chr8 128750494 + Exonic hg19 CESC TCGA-LP-A5U2-01A 27 164 5'UTR-CDS Intra-chr q24.21 q24.21 Oncogene Transcription factor 24627 ChimerSeq STARFusion TCGA_RNA-Seq KPNA1-CHRNA9 KPNA1 chr3 122233604 - CHRNA9 chr4 40350899 + Exonic hg19 CESC TCGA-LP-A5U2-01A 7 27 5'UTR-CDS Inter-chr q21.1 p14 Seq+ 24628 ChimerSeq STARFusion TCGA_RNA-Seq KPNA1-CHRNA9 KPNA1 chr3 122233604 - CHRNA9 chr4 40355996 + Exonic hg19 CESC TCGA-LP-A5U2-01A 2 27 5'UTR-CDS Inter-chr q21.1 p14 Seq+ 24629 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-ITGB3BP RCC1 chr1 28834672 + ITGB3BP chr1 63920639 - Exonic hg19 CESC TCGA-LP-A5U2-01A 3 7 5'UTR-CDS Intra-chr p35.3 p31.3 Seq+ 24630 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-ITGB3BP SNHG3 chr1 28834672 + ITGB3BP chr1 63920639 - Exonic hg19 CESC TCGA-LP-A5U2-01A 3 7 5'UTR-CDS Intra-chr p35.3 p31.3 24631 ChimerSeq STARFusion TCGA_RNA-Seq ALG6-DUT ALG6 chr1 63872797 + DUT chr15 48626614 + Exonic hg19 CESC TCGA-EA-A44S-01A 4 1 In-Frame Inter-chr p31.3 q21.1 Seq+ 24632 ChimerSeq STARFusion TCGA_RNA-Seq CAPZA2-S100A8 CAPZA2 chr7 116502704 + S100A8 chr1 153363033 - Exonic hg19 CESC TCGA-EA-A44S-01A 2 1 CDS-5'UTR Inter-chr q31.2 q21.3 Seq+ 24633 ChimerSeq STARFusion TCGA_RNA-Seq STAG1-IL20RB STAG1 chr3 136076562 - IL20RB chr3 136728955 + Exonic hg19 CESC TCGA-EA-A44S-01A 2 1 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 24634 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-WDR70 NIPBL chr5 36877280 + WDR70 chr5 37697757 + Exonic hg19 CESC TCGA-LP-A4AX-01A 9 25 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 24635 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-ERBB2 GRB7 chr17 37894645 + ERBB2 chr17 37886276 + Exonic hg19 CESC TCGA-VS-A9V5 10 32 5'UTR-3'UTR Intra-chr q12 q12 Oncogene Seq+ 24636 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-ERBB2 GRB7 chr17 37894386 + ERBB2 chr17 37886276 + Exonic hg19 CESC TCGA-VS-A9V5 2 32 5'UTR-3'UTR Intra-chr q12 q12 Oncogene Seq+ 24637 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-ELK2AP GAS6 chr13 114525073 - ELK2AP chr14 106136185 - Exonic hg19 CESC TCGA-FU-A3YQ-01A 3 0 Out-of-frame Inter-chr q34 Oncogene 24638 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-CDC42EP2 MALAT1 chr11 65271158 + CDC42EP2 chr11 65089886 + Exonic hg19 CESC TCGA-EA-A3QE-01A 8 5 Out-of-frame Intra-chr q13.1 q13.1 24639 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 CESC TCGA-EA-A3QE-01A 4 20 3'UTR-5'UTR Intra-chr q34 24640 ChimerSeq STARFusion TCGA_RNA-Seq AGSK1-LOC388152 AGSK1 chr15 82764734 - LOC388152 chr15 84868708 - Exonic hg19 CESC TCGA-EA-A3QE-01A 3 23 Out-of-frame Intra-chr 24641 ChimerSeq STARFusion TCGA_RNA-Seq NCOA6-AHCY NCOA6 chr20 33356267 - AHCY chr20 32883391 - Exonic hg19 CESC TCGA-EK-A2IR-01A 7 32 In-Frame Intra-chr q11.22 q11.22 Seq+ 24642 ChimerSeq STARFusion TCGA_RNA-Seq KDM4C-DMRT3 KDM4C chr9 6814745 + DMRT3 chr9 990041 + Exonic hg19 CESC TCGA-EK-A2IR-01A 5 21 Out-of-frame Intra-chr p24.1 p24.3 Transcription factor Seq+ 24643 ChimerSeq STARFusion TCGA_RNA-Seq TESK2-GNA12 TESK2 chr1 45851584 - GNA12 chr7 2834777 - Exonic hg19 CESC TCGA-EK-A2IR-01A 4 20 In-Frame Inter-chr p34.1 TKL:LISK p22.2 Seq+ 24644 ChimerSeq STARFusion TCGA_RNA-Seq CMSS1-FILIP1L CMSS1 chr3 99536887 + FILIP1L chr3 99569914 - Exonic hg19 CESC TCGA-EK-A2IR-01A 2 3 Out-of-frame Intra-chr q12.1 q12.1 24645 ChimerSeq STARFusion TCGA_RNA-Seq SRRD-SNX32 SRRD chr22 26882029 + SNX32 chr11 65616949 + Exonic hg19 CESC TCGA-C5-A2LT-01A 4 2 Out-of-frame Inter-chr q12.1 q13.1 Seq+ 24646 ChimerSeq STARFusion TCGA_RNA-Seq OTUD5-TEX101 OTUD5 chrX 48783123 - TEX101 chr19 43906918 + Exonic hg19 CESC TCGA-C5-A2LT-01A 2 0 CDS-5'UTR Inter-chr p11.23 q13.31 24647 ChimerSeq STARFusion TCGA_RNA-Seq ABCA1-PTGR1 ABCA1 chr9 107665895 - PTGR1 chr9 114359712 - Exonic hg19 CESC TCGA-ZJ-A8QO-01A 17 44 CDS-5'UTR Intra-chr q31.1 q31.3 Seq+ 24648 ChimerSeq STARFusion TCGA_RNA-Seq ABCA1-PTGR1 ABCA1 chr9 107690216 - PTGR1 chr9 114359712 - Exonic hg19 CESC TCGA-ZJ-A8QO-01A 2 44 5'UTR-5'UTR Intra-chr q31.1 q31.3 Seq+ 24649 ChimerSeq STARFusion TCGA_RNA-Seq RNF19A-SNX31 RNF19A chr8 101322095 - SNX31 chr8 101648239 - Exonic hg19 CESC TCGA-ZJ-A8QO-01A 3 4 5'UTR-CDS Intra-chr q22.2 q22.3 Seq+ 24650 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPD-SCD5 HNRNPD chr4 83294599 - SCD5 chr4 83626566 - Exonic hg19 CESC TCGA-ZJ-A8QO-01A 2 5 Out-of-frame Intra-chr q21.22 q21.22 Seq+ 24651 ChimerSeq STARFusion TCGA_RNA-Seq BNIP3-PPP2R2D BNIP3 chr10 133795265 - PPP2R2D chr10 133769188 + Exonic hg19 CESC TCGA-ZJ-A8QO-01A 2 1 Out-of-frame Intra-chr q26.3 q26.3 24652 ChimerSeq STARFusion TCGA_RNA-Seq OTUD5-TEX101 OTUD5 chrX 48783123 - TEX101 chr19 43906918 + Exonic hg19 CESC TCGA-ZJ-A8QO-01A 2 0 CDS-5'UTR Inter-chr p11.23 q13.31 24653 ChimerSeq STARFusion TCGA_RNA-Seq SDF4-DVL1 SDF4 chr1 1158624 - DVL1 chr1 1278138 - Exonic hg19 CESC TCGA-C5-A902-01A 7 63 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 24654 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983374 - RSRC2 chr12 122990253 - Exonic hg19 CESC TCGA-ZJ-AAX8 21 102 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 24655 ChimerSeq STARFusion TCGA_RNA-Seq RB1-ITM2B RB1 chr13 48881542 + ITM2B chr13 48827944 + Exonic hg19 CESC TCGA-EA-A3HT-01A 2 1 In-Frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Seq+ 24656 ChimerSeq STARFusion TCGA_RNA-Seq ITGAL-MCAM ITGAL chr16 30534272 + MCAM chr11 119179695 - Exonic hg19 CESC TCGA-FU-A57G-01A 3 6 Out-of-frame Inter-chr p11.2 q23.3 24657 ChimerSeq STARFusion TCGA_RNA-Seq MRPS18A-RSPH9 MRPS18A chr6 43639577 - RSPH9 chr6 43623299 + Exonic hg19 CESC TCGA-HG-A2PA-01A 26 107 Out-of-frame Intra-chr p21.1 p21.1 24658 ChimerSeq STARFusion TCGA_RNA-Seq LOC100288778-WASH3P LOC100288778 chr12 89017 + WASH3P chr15 102515209 + Exonic hg19 CESC TCGA-EK-A2RC-01A 3 7 Out-of-frame Inter-chr q26.3 24659 ChimerSeq STARFusion TCGA_RNA-Seq ACTG1-LOC644961 ACTG1 chr17 79477225 - LOC644961 chr1 27652670 + Exonic hg19 CESC TCGA-EK-A2RC-01A 3 1 Out-of-frame Inter-chr q25.3 24660 ChimerSeq STARFusion TCGA_RNA-Seq RIOK1-EYS RIOK1 chr6 7414623 + EYS chr6 66006012 - Exonic hg19 CESC TCGA-ZJ-A8QQ-01A 8 19 Out-of-frame Intra-chr p24.3 Atypical:RIO q12 Seq+ 24661 ChimerSeq STARFusion TCGA_RNA-Seq CCT3-IQGAP3 CCT3 chr1 156280349 - IQGAP3 chr1 156510708 - Exonic hg19 CESC TCGA-ZJ-A8QQ-01A 6 12 Out-of-frame Intra-chr q22 q22 Seq+ 24662 ChimerSeq STARFusion TCGA_RNA-Seq SGOL1-EFHB SGOL1 chr3 20227551 - EFHB chr3 19947241 - Exonic hg19 CESC TCGA-C5-A7CK-01A 8 43 5'UTR-CDS Intra-chr p24.3 24663 ChimerSeq STARFusion TCGA_RNA-Seq SGOL1-EFHB SGOL1 chr3 20227440 - EFHB chr3 19947241 - Exonic hg19 CESC TCGA-C5-A7CK-01A 5 43 5'UTR-CDS Intra-chr p24.3 24664 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-MYC PVT1 chr8 128903244 + MYC chr8 128750494 + Exonic hg19 CESC TCGA-C5-A2M1-01A 9 68 5'UTR-CDS Intra-chr q24.21 q24.21 Oncogene Transcription factor KB Pub Seq+ 24665 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-MYC PVT1 chr8 128903244 + MYC chr8 128750497 + Exonic hg19 CESC TCGA-C5-A2M1-01A 8 68 5'UTR-CDS Intra-chr q24.21 q24.21 Oncogene Transcription factor KB Pub Seq+ 24666 ChimerSeq STARFusion TCGA_RNA-Seq ZFP28-ZNF383 ZFP28 chr19 57051085 + ZNF383 chr19 37733371 + Exonic hg19 CESC TCGA-C5-A2M1-01A 9 17 Out-of-frame Intra-chr q13.43 Transcription factor q13.12 Transcription factor 24667 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R37-GLTSCR1 PPP1R37 chr19 45596785 + GLTSCR1 chr19 48173700 + Exonic hg19 CESC TCGA-C5-A2M1-01A 4 11 CDS-5'UTR Intra-chr q13.32 Tumor suppressor gene Seq+ 24668 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPC-BCL2L2 HNRNPC chr14 21737457 - BCL2L2 chr14 23776401 + Exonic hg19 CESC TCGA-C5-A2M1-01A 2 6 5'UTR-5'UTR Intra-chr q11.2 q11.2 Oncogene 24669 ChimerSeq STARFusion TCGA_RNA-Seq ACTR3-LOC440900 ACTR3 chr2 114647900 + LOC440900 chr2 114764596 + Exonic hg19 CESC TCGA-VS-A954-01A 17 49 CDS-5'UTR Intra-chr q14.1 24670 ChimerSeq STARFusion TCGA_RNA-Seq AGMO-MEOX2 AGMO chr7 15584397 - MEOX2 chr7 15666543 - Exonic hg19 CESC TCGA-VS-A9UZ 5 23 In-Frame Intra-chr p21.2 p21.2 Transcription factor Seq+ 24671 ChimerSeq STARFusion TCGA_RNA-Seq SYT7-SDHAF2 SYT7 chr11 61290547 - SDHAF2 chr11 61213413 + Exonic hg19 CESC TCGA-MY-A5BF-01A 13 88 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 24672 ChimerSeq STARFusion TCGA_RNA-Seq MBP-ARF1 MBP chr18 74844536 - ARF1 chr1 228284779 + Exonic hg19 CESC TCGA-MY-A5BF-01A 2 1 5'UTR-5'UTR Inter-chr q23 q42.13 Tumor suppressor gene 24673 ChimerSeq STARFusion TCGA_RNA-Seq NPLOC4-OXLD1 NPLOC4 chr17 79596751 - OXLD1 chr17 79632614 - Exonic hg19 CESC TCGA-FU-A5XV-01A 2 9 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 24674 ChimerSeq STARFusion TCGA_RNA-Seq NSD1-DPEP2 NSD1 chr5 176619020 + DPEP2 chr16 68027160 - Exonic hg19 CESC TCGA-C5-A7UH-01A 3 57 CDS-5'UTR Inter-chr q35.3 Oncogene q22.1 Seq+ 24675 ChimerSeq STARFusion TCGA_RNA-Seq NSD1-DPEP2 NSD1 chr5 176619020 + DPEP2 chr16 68023301 - Exonic hg19 CESC TCGA-C5-A7UH-01A 3 57 In-Frame Inter-chr q35.3 Oncogene q22.1 Seq+ 24676 ChimerSeq STARFusion TCGA_RNA-Seq NSD1-DPEP2 NSD1 chr5 176619020 + DPEP2 chr16 68024900 - Exonic hg19 CESC TCGA-C5-A7UH-01A 2 57 Out-of-frame Inter-chr q35.3 Oncogene q22.1 Seq+ 24677 ChimerSeq STARFusion TCGA_RNA-Seq SOGA1-RBL1 SOGA1 chr20 35457457 - RBL1 chr20 35632269 - Exonic hg19 CESC TCGA-C5-A7UH-01A 3 13 In-Frame Intra-chr q11.23 q11.23 Tumor suppressor gene Seq+ 24678 ChimerSeq STARFusion TCGA_RNA-Seq EPHB3-P2RY12 EPHB3 chr3 184280141 + P2RY12 chr3 151058548 - Exonic hg19 CESC TCGA-C5-A7UH-01A 2 5 CDS-5'UTR Intra-chr q27.1 Tumor suppressor gene q25.1 Seq+ 24679 ChimerSeq STARFusion TCGA_RNA-Seq VRK2-FANCL VRK2 chr2 58316858 + FANCL chr2 58393009 - Exonic hg19 CESC TCGA-C5-A7UH-01A 2 0 In-Frame Intra-chr p16.1 CK1:VRK p16.1 Seq+ 24680 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-ERBB2 GRB7 chr17 37902455 + ERBB2 chr17 37849514 + Exonic hg19 CESC TCGA-C5-A1M9-01A 3 5 CDS-5'UTR Intra-chr q12 q12 Oncogene Seq+ 24681 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-IKZF3 ERBB2 chr17 37872858 + IKZF3 chr17 37985741 - Exonic hg19 CESC TCGA-C5-A2LX-01A 5 26 Out-of-frame Intra-chr q12 Oncogene q21.1 Tumor suppressor gene Transcription factor Seq+ 24682 ChimerSeq STARFusion TCGA_RNA-Seq PKD1-UBE2I PKD1 chr16 2155323 - UBE2I chr16 1365655 + Exonic hg19 CESC TCGA-C5-A2LX-01A 6 3 In-Frame Intra-chr p13.3 CAMK:PKD Tumor suppressor gene p13.3 Seq+ 24683 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-LOC100507412 ZFAND3 chr6 38050233 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 CESC TCGA-EK-A3GJ-01A 5 57 CDS-5'UTR Inter-chr p21.2 24684 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-LOC100507412 ZFAND3 chr6 38029551 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 CESC TCGA-EK-A3GJ-01A 2 57 CDS-5'UTR Inter-chr p21.2 24685 ChimerSeq STARFusion TCGA_RNA-Seq SFN-YWHAG SFN chr1 27190112 + YWHAG chr7 75959255 - Exonic hg19 CESC TCGA-EK-A3GJ-01A 4 3 Out-of-frame Inter-chr p36.11 Tumor suppressor gene q11.23 24686 ChimerSeq STARFusion TCGA_RNA-Seq VMP1-TUBD1 VMP1 chr17 57895134 + TUBD1 chr17 57944110 - Exonic hg19 CESC TCGA-EK-A3GJ-01A 2 11 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 24687 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-AGO2 PTK2 chr8 142011224 - AGO2 chr8 141551457 - Exonic hg19 CESC TCGA-VS-A94Y-01A 5 12 Out-of-frame Intra-chr q24.3 q24.3 24688 ChimerSeq STARFusion TCGA_RNA-Seq LINC00673-SLC39A11 LINC00673 chr17 70588342 - SLC39A11 chr17 70732858 - Exonic hg19 CESC TCGA-VS-A94Y-01A 2 9 Out-of-frame Intra-chr q25.1 24689 ChimerSeq STARFusion TCGA_RNA-Seq ACOT7-MIB2 ACOT7 chr1 6378552 - MIB2 chr1 1560666 + Exonic hg19 CESC TCGA-C5-A8YQ-01A 9 42 In-Frame Intra-chr p36.31 p36.33 Seq+ 24690 ChimerSeq STARFusion TCGA_RNA-Seq RBM15-ZYG11B RBM15 chr1 110882624 + ZYG11B chr1 53250549 + Exonic hg19 CESC TCGA-C5-A8YQ-01A 14 20 Out-of-frame Intra-chr p13.3 p32.3 Seq+ 24691 ChimerSeq STARFusion TCGA_RNA-Seq INADL-APITD1 INADL chr1 62293255 + APITD1 chr1 10493899 + Exonic hg19 CESC TCGA-C5-A8YQ-01A 10 34 In-Frame Intra-chr Tumor suppressor gene Seq+ 24692 ChimerSeq STARFusion TCGA_RNA-Seq SEC61G-HDAC9 SEC61G chr7 54825188 - HDAC9 chr7 18868784 + Exonic hg19 CESC TCGA-C5-A8YQ-01A 4 28 Out-of-frame Intra-chr p11.2 p21.1 24693 ChimerSeq STARFusion TCGA_RNA-Seq OTUD5-TEX101 OTUD5 chrX 48783123 - TEX101 chr19 43906918 + Exonic hg19 CESC TCGA-BI-A20A-01A 2 0 CDS-5'UTR Inter-chr p11.23 q13.31 24694 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL1A-SS18 OSBPL1A chr18 21977619 - SS18 chr18 23637706 - Exonic hg19 CESC TCGA-RA-A741-01A 6 14 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 24695 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-PGA3 KDM2A chr11 67023760 + PGA3 chr11 60975870 + Exonic hg19 CESC TCGA-RA-A741-01A 7 8 Out-of-frame Intra-chr q13.2 Transcription factor q12.2 Seq+ 24696 ChimerSeq STARFusion TCGA_RNA-Seq YAP1-SS18 YAP1 chr11 101981900 + SS18 chr18 23667541 - Exonic hg19 CESC TCGA-RA-A741-01A 3 5 In-Frame Inter-chr q22.1 Tumor suppressor gene q11.2 Seq+ 24697 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD40-NFIX ANKRD40 chr17 48784882 - NFIX chr19 13135835 + Exonic hg19 CESC TCGA-C5-A7CM-01A 5 6 Out-of-frame Inter-chr q21.33 p13.13 Transcription factor Seq+ 24698 ChimerSeq STARFusion TCGA_RNA-Seq CRCP-ADAM22 CRCP chr7 65579957 + ADAM22 chr7 87704941 + Exonic hg19 CESC TCGA-C5-A7CM-01A 2 5 In-Frame Intra-chr q11.21 q21.12 Seq+ 24699 ChimerSeq STARFusion TCGA_RNA-Seq LINC00649-MRPS6 LINC00649 chr21 35318199 + MRPS6 chr21 35497641 + Exonic hg19 CESC TCGA-C5-A1BN-01B 2 2 Out-of-frame Intra-chr q22.11 q22.11 24700 ChimerSeq STARFusion TCGA_RNA-Seq FN3K-MYO16 FN3K chr17 80706853 + MYO16 chr13 109535407 + Exonic hg19 CESC TCGA-FU-A3NI-01A 2 7 In-Frame Inter-chr q25.3 Seq+ 24701 ChimerSeq STARFusion TCGA_RNA-Seq CRCP-CCT6P1 CRCP chr7 65599361 + CCT6P1 chr7 65219514 + Exonic hg19 CESC TCGA-FU-A3NI-01A 2 3 5'UTR-5'UTR Intra-chr q11.21 q11.21 24702 ChimerSeq STARFusion TCGA_RNA-Seq BEST1-MAN2A2 BEST1 chr11 61734930 + MAN2A2 chr15 91463772 + Exonic hg19 CESC TCGA-VS-A9UJ 3 1 Out-of-frame Inter-chr q12.3 q26.1 24703 ChimerSeq STARFusion TCGA_RNA-Seq CCT5-MARCH6 CCT5 chr5 10261857 + 2019_ 3_ 6_ chr5 10423847 + Exonic hg19 CESC TCGA-EK-A2GZ-01A 2 1 Out-of-frame Intra-chr p15.2 p15.2 24704 ChimerSeq STARFusion TCGA_RNA-Seq MED13-BAHCC1 MED13 chr17 60142501 - BAHCC1 chr17 79430637 + Exonic hg19 CESC TCGA-VS-A8EJ-01A 65 265 In-Frame Intra-chr q23.2 q25.3 Seq+ 24705 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-RUNDC3A SSH2 chr17 28022477 - RUNDC3A chr17 42393753 + Exonic hg19 CESC TCGA-VS-A8EJ-01A 25 69 Out-of-frame Intra-chr q11.2 q21.31 Seq+ 24706 ChimerSeq STARFusion TCGA_RNA-Seq TRIM37-MED13 TRIM37 chr17 57148184 - MED13 chr17 60130066 - Exonic hg19 CESC TCGA-VS-A8EJ-01A 6 71 Out-of-frame Intra-chr q22 q23.2 Seq+ 24707 ChimerSeq STARFusion TCGA_RNA-Seq PITPNC1-SKAP1 PITPNC1 chr17 65374318 + SKAP1 chr17 46248021 - Exonic hg19 CESC TCGA-VS-A8EJ-01A 10 32 Out-of-frame Intra-chr q24.2 q21.32 Seq+ 24708 ChimerSeq STARFusion TCGA_RNA-Seq SUZ12P1-C17orf64 SUZ12P1 chr17 29036829 + C17orf64 chr17 58503144 + Exonic hg19 CESC TCGA-VS-A8EJ-01A 4 20 5'UTR-CDS Intra-chr q11.2 q23.2 Seq+ 24709 ChimerSeq STARFusion TCGA_RNA-Seq ACBD4-ARL17A ACBD4 chr17 43216527 + ARL17A chr17_ctg5_hap1 1487621 + Exonic hg19 CESC TCGA-VS-A8EJ-01A 8 2 CDS-3'UTR Inter-chr q21.31 q21.31 24710 ChimerSeq STARFusion TCGA_RNA-Seq ACBD4-LRRC37A4P ACBD4 chr17 43216527 + LRRC37A4P chr17_ctg5_hap1 1487621 + Exonic hg19 CESC TCGA-VS-A8EJ-01A 8 2 CDS-3'UTR Inter-chr q21.31 24711 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-LINC00511 STARD3 chr17 37793484 + LINC00511 chr17 70614703 - Exonic hg19 CESC TCGA-VS-A8EJ-01A 3 10 5'UTR-3'UTR Intra-chr q12 q24.3 24712 ChimerSeq STARFusion TCGA_RNA-Seq ACBD4-LRRC37A ACBD4 chr17 43216527 + LRRC37A chr17 44412911 + Exonic hg19 CESC TCGA-VS-A8EJ-01A 3 2 In-Frame Intra-chr q21.31 Seq+ 24713 ChimerSeq STARFusion TCGA_RNA-Seq EEFSEC-PPP2R3A EEFSEC chr3 127983624 + PPP2R3A chr3 135863885 + Exonic hg19 CESC TCGA-VS-A8EJ-01A 2 3 Out-of-frame Intra-chr q21.3 q22.2 Seq+ 24714 ChimerSeq STARFusion TCGA_RNA-Seq SPOP-STXBP4 SPOP chr17 47755295 - STXBP4 chr17 53150261 + Exonic hg19 CESC TCGA-VS-A8EJ-01A 2 1 5'UTR-CDS Intra-chr q21.33 Oncogene Tumor suppressor gene q22 Seq+ 24715 ChimerSeq STARFusion TCGA_RNA-Seq MIR1204-MYC MIR1204 chr8 128808254 + MYC chr8 128750494 + Exonic hg19 CESC TCGA-EA-A3HQ-01A 6 15 5'UTR-CDS Intra-chr q24.21 q24.21 Oncogene Transcription factor 24716 ChimerSeq STARFusion TCGA_RNA-Seq SFN-YWHAG SFN chr1 27190112 + YWHAG chr7 75959255 - Exonic hg19 CESC TCGA-EA-A3HQ-01A 4 1 Out-of-frame Inter-chr p36.11 Tumor suppressor gene q11.23 24717 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-COX4I2 TPX2 chr20 30327424 + COX4I2 chr20 30232571 + Exonic hg19 CESC TCGA-LP-A7HU-01A 17 129 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 24718 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-COX4I2 TPX2 chr20 30347982 + COX4I2 chr20 30227736 + Exonic hg19 CESC TCGA-LP-A7HU-01A 6 129 In-Frame Intra-chr q11.21 q11.21 Seq+ 24719 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-COX4I2 TPX2 chr20 30330450 + COX4I2 chr20 30227736 + Exonic hg19 CESC TCGA-LP-A7HU-01A 2 129 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 24720 ChimerSeq STARFusion TCGA_RNA-Seq NCEH1-BCL2L1 NCEH1 chr3 172428637 - BCL2L1 chr20 30253889 - Exonic hg19 CESC TCGA-LP-A7HU-01A 4 14 In-Frame Inter-chr q26.31 q11.21 Oncogene Seq+ 24721 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-BCL2L1 TPX2 chr20 30330450 + BCL2L1 chr20 30253889 - Exonic hg19 CESC TCGA-LP-A7HU-01A 3 3 5'UTR-5'UTR Intra-chr q11.21 q11.21 Oncogene 24722 ChimerSeq STARFusion TCGA_RNA-Seq NUP62-TBC1D17 NUP62 chr19 50430951 - TBC1D17 chr19 50385298 + Exonic hg19 CESC TCGA-IR-A3LH-01A 27 129 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 24723 ChimerSeq STARFusion TCGA_RNA-Seq IL4I1-TBC1D17 IL4I1 chr19 50430951 - TBC1D17 chr19 50385298 + Exonic hg19 CESC TCGA-IR-A3LH-01A 27 128 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 24724 ChimerSeq STARFusion TCGA_RNA-Seq VRK3-TGFB1 VRK3 chr19 50504047 - TGFB1 chr19 41838186 - Exonic hg19 CESC TCGA-IR-A3LH-01A 12 137 Out-of-frame Intra-chr q13.33 CK1:VRK q13.2 Tumor suppressor gene Seq+ 24725 ChimerSeq STARFusion TCGA_RNA-Seq NUP62-TBC1D17 NUP62 chr19 50430951 - TBC1D17 chr19 50385499 + Exonic hg19 CESC TCGA-IR-A3LH-01A 3 129 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 24726 ChimerSeq STARFusion TCGA_RNA-Seq IL4I1-TBC1D17 IL4I1 chr19 50430951 - TBC1D17 chr19 50385499 + Exonic hg19 CESC TCGA-IR-A3LH-01A 3 128 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 24727 ChimerSeq STARFusion TCGA_RNA-Seq ZNF226-AKT2 ZNF226 chr19 44669960 + AKT2 chr19 40748594 - Exonic hg19 CESC TCGA-IR-A3LH-01A 4 29 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.2 AGC:Akt Oncogene Seq+ 24728 ChimerSeq STARFusion TCGA_RNA-Seq LMTK3-NOSIP LMTK3 chr19 49000650 - NOSIP chr19 50063949 - Exonic hg19 CESC TCGA-IR-A3LH-01A 3 7 CDS-5'UTR Intra-chr q13.33 q13.33 Seq+ 24729 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-ID1 TPX2 chr20 30327424 + ID1 chr20 30193175 + Exonic hg19 CESC TCGA-IR-A3LH-01A 3 3 5'UTR-5'UTR Intra-chr q11.21 q11.21 Seq+ 24730 ChimerSeq STARFusion TCGA_RNA-Seq LITAF-BCAR4 LITAF chr16 11680742 - BCAR4 chr16 11914154 - Exonic hg19 CESC TCGA-EA-A5ZF-01A 25 11 5'UTR-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 24731 ChimerSeq STARFusion TCGA_RNA-Seq LITAF-BCAR4 LITAF chr16 11680742 - BCAR4 chr16 11915612 - Exonic hg19 CESC TCGA-EA-A5ZF-01A 5 11 5'UTR-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 24732 ChimerSeq STARFusion TCGA_RNA-Seq CHD2-LOC100507217 CHD2 chr15 93444529 + LOC100507217 chr15 93428745 + Exonic hg19 CESC TCGA-EA-A5ZF-01A 2 1 CDS-5'UTR Intra-chr q26.1 24733 ChimerSeq STARFusion TCGA_RNA-Seq CHD2-LOC100507217 CHD2 chr15 93444529 + LOC100507217 chr15 93440954 + Exonic hg19 CESC TCGA-EA-A5ZF-01A 2 1 CDS-5'UTR Intra-chr q26.1 24734 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125699 - CXCL16 chr17 4637313 - Exonic hg19 CESC TCGA-VS-AA62 3 2 Out-of-frame Inter-chr q12.2 p13.2 24735 ChimerSeq STARFusion TCGA_RNA-Seq EZR-ALDH6A1 EZR chr6 159239114 - ALDH6A1 chr14 74538200 - Exonic hg19 CESC TCGA-C5-A8YT-01A 2 1 Out-of-frame Inter-chr q25.3 q24.3 24736 ChimerSeq STARFusion TCGA_RNA-Seq CLIP1-ZCCHC8 CLIP1 chr12 122907068 - ZCCHC8 chr12 122958822 - Exonic hg19 CESC TCGA-ZJ-AAXN 53 33 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 24737 ChimerSeq STARFusion TCGA_RNA-Seq TTLL1-PACSIN2 TTLL1 chr22 43442416 - PACSIN2 chr22 43308163 - Exonic hg19 CESC TCGA-DG-A2KK-01A 2 1 CDS-5'UTR Intra-chr q13.2 q13.2 24738 ChimerSeq STARFusion TCGA_RNA-Seq SYN2-PPARG SYN2 chr3 12224872 + PPARG chr3 12421203 + Exonic hg19 CESC TCGA-JW-A5VH-01A 2 12 In-Frame Intra-chr p25.2 p25.2 Oncogene Tumor suppressor gene Transcription factor 24739 ChimerSeq STARFusion TCGA_RNA-Seq PLGRKT-JAK2 PLGRKT chr9 5431897 - JAK2 chr9 5123004 + Exonic hg19 CESC TCGA-PN-A8MA-01A 24 256 Out-of-frame Intra-chr p24.1 p24.1 TK:JakA Oncogene Seq+ 24740 ChimerSeq STARFusion TCGA_RNA-Seq PLGRKT-JAK2 PLGRKT chr9 5436569 - JAK2 chr9 5123004 + Exonic hg19 CESC TCGA-PN-A8MA-01A 5 256 5'UTR-CDS Intra-chr p24.1 p24.1 TK:JakA Oncogene Seq+ 24741 ChimerSeq STARFusion TCGA_RNA-Seq JAK2-RCL1 JAK2 chr9 5090911 + RCL1 chr9 4834141 + Exonic hg19 CESC TCGA-PN-A8MA-01A 7 46 Out-of-frame Intra-chr p24.1 TK:JakA Oncogene p24.1 Seq+ 24742 ChimerSeq STARFusion TCGA_RNA-Seq SIK2-C11orf53 SIK2 chr11 111491126 + C11orf53 chr11 111152123 + Exonic hg19 CESC TCGA-ZJ-AAXB 2 15 CDS-5'UTR Intra-chr q23.1 q23.1 Seq+ 24743 ChimerSeq STARFusion TCGA_RNA-Seq SHFM1-ACN9 SHFM1 chr7 96324110 - ACN9 chr7 96810324 + Exonic hg19 CESC TCGA-C5-A8ZZ-01A 2 1 Out-of-frame Intra-chr 24744 ChimerSeq STARFusion TCGA_RNA-Seq LONP1-RAD51 LONP1 chr19 5700800 - RAD51 chr15 41023253 + Exonic hg19 CESC TCGA-EA-A50E-01A 25 126 In-Frame Inter-chr p13.3 q15.1 Seq+ 24745 ChimerSeq STARFusion TCGA_RNA-Seq ARL8B-ITPR1 ARL8B chr3 5164273 + ITPR1 chr3 4887823 + Exonic hg19 CESC TCGA-EA-A50E-01A 22 123 In-Frame Intra-chr p26.1 p26.1 Seq+ 24746 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-KRT17 RNA45S5 chrUn_gl000220 117367 + KRT17 chr17 39779268 - Exonic hg19 CESC TCGA-EA-A50E-01A 3 4 Out-of-frame Inter-chr q21.2 24747 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT1-BAG1 B4GALT1 chr9 33166756 - BAG1 chr9 33262828 - Exonic hg19 CESC TCGA-EA-A1QS-01A 25 278 In-Frame Intra-chr p21.1 p13.3 Seq+ 24748 ChimerSeq STARFusion TCGA_RNA-Seq EIF5B-LYG1 EIF5B chr2 99954052 + LYG1 chr2 99909103 - Exonic hg19 CESC TCGA-EA-A1QS-01A 3 14 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 24749 ChimerSeq STARFusion TCGA_RNA-Seq NOC2L-C1orf159 NOC2L chr1 894595 - C1orf159 chr1 1022977 - Exonic hg19 CESC TCGA-EA-A1QS-01A 5 5 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 24750 ChimerSeq STARFusion TCGA_RNA-Seq PICK1-GCAT PICK1 chr22 38453594 + GCAT chr22 38209470 + Exonic hg19 CESC TCGA-EA-A556-01A 8 36 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 24751 ChimerSeq STARFusion TCGA_RNA-Seq TEX2-BCAM TEX2 chr17 62248460 - BCAM chr19 45314482 + Exonic hg19 CESC TCGA-EA-A556-01A 3 42 In-Frame Inter-chr q23.3 q13.32 Seq+ 24752 ChimerSeq STARFusion TCGA_RNA-Seq DPCD-POLL DPCD chr10 103348157 + POLL chr10 103340173 - Exonic hg19 CESC TCGA-EA-A556-01A 4 21 Out-of-frame Intra-chr q24.32 q24.32 24753 ChimerSeq STARFusion TCGA_RNA-Seq TBP-FAM120B TBP chr6 170873720 + FAM120B chr6 170713638 + Exonic hg19 CESC TCGA-EA-A556-01A 5 12 Out-of-frame Intra-chr q27 Transcription factor Seq+ 24754 ChimerSeq STARFusion TCGA_RNA-Seq DPCD-POLL DPCD chr10 103348157 + POLL chr10 103345913 - Exonic hg19 CESC TCGA-EA-A556-01A 2 21 In-Frame Intra-chr q24.32 q24.32 24755 ChimerSeq STARFusion TCGA_RNA-Seq NDUFA13-GATAD2A NDUFA13 chr19 19627141 + GATAD2A chr19 19576149 + Exonic hg19 CESC TCGA-EA-A556-01A 2 4 CDS-5'UTR Intra-chr p13.11 p13.11 Transcription factor 24756 ChimerSeq STARFusion TCGA_RNA-Seq RIOK1-EYS RIOK1 chr6 7414623 + EYS chr6 66006012 - Exonic hg19 CESC TCGA-EK-A2H0-01A 19 60 Out-of-frame Intra-chr p24.3 Atypical:RIO q12 Seq+ 24757 ChimerSeq STARFusion TCGA_RNA-Seq CCT3-IQGAP3 CCT3 chr1 156280349 - IQGAP3 chr1 156510708 - Exonic hg19 CESC TCGA-EK-A2H0-01A 3 30 Out-of-frame Intra-chr q22 q22 Seq+ 24758 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-UBA1 RNA45S5 chrUn_gl000220 114757 + UBA1 chrX 47074307 + Exonic hg19 CESC TCGA-EK-A2H0-01A 3 1 Out-of-frame Inter-chr p11.3 24759 ChimerSeq STARFusion TCGA_RNA-Seq LRP2-FASTKD1 LRP2 chr2 170018982 - FASTKD1 chr2 170388000 - Exonic hg19 CESC TCGA-EK-A2RJ-01A 15 49 In-Frame Intra-chr q31.1 q31.1 Seq+ 24760 ChimerSeq STARFusion TCGA_RNA-Seq CHST8-C19orf24 CHST8 chr19 34180297 + C19orf24 chr19 1278776 + Exonic hg19 CESC TCGA-EK-A2RJ-01A 11 26 Out-of-frame Intra-chr q13.11 p13.3 Seq+ 24761 ChimerSeq STARFusion TCGA_RNA-Seq HNRPLL-NFATC3 HNRPLL chr2 38812786 - NFATC3 chr16 68191772 + Exonic hg19 CESC TCGA-EK-A2RJ-01A 6 21 In-Frame Inter-chr q22.1 Transcription factor Seq+ 24762 ChimerSeq STARFusion TCGA_RNA-Seq SETD4-LOC100133286 SETD4 chr21 37417880 - LOC100133286 chr21 37442783 - Exonic hg19 CESC TCGA-EK-A2RJ-01A 2 0 3'UTR-3'UTR Intra-chr q22.12 24763 ChimerSeq STARFusion TCGA_RNA-Seq PCBP2-SP1 PCBP2 chr12 53862616 + SP1 chr12 53803146 + Exonic hg19 CESC TCGA-MA-AA41-01A 32 61 Out-of-frame Intra-chr q13.13 q13.13 Transcription factor Seq+ 24764 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0907-CD276 KIAA0907 chr1 155887290 - CD276 chr15 74001989 + Exonic hg19 CESC TCGA-MA-AA41-01A 4 23 Out-of-frame Inter-chr q22 q24.1 Seq+ 24765 ChimerSeq STARFusion TCGA_RNA-Seq MAP2K1-LCE1C MAP2K1 chr15 66777529 + LCE1C chr1 152777974 - Exonic hg19 CESC TCGA-MA-AA41-01A 2 3 CDS-5'UTR Inter-chr q22.31 STE:STE7 Oncogene q21.3 Seq+ 24766 ChimerSeq STARFusion TCGA_RNA-Seq ABLIM3-TRPM8 ABLIM3 chr5 148521671 + TRPM8 chr2 234835178 + Exonic hg19 CESC TCGA-HM-A3JJ-01A 3 5 CDS-5'UTR Inter-chr q32 q37.1 Seq+ 24767 ChimerSeq STARFusion TCGA_RNA-Seq H6PD-SPSB1 H6PD chr1 9307142 + SPSB1 chr1 9415802 + Exonic hg19 CESC TCGA-HM-A3JJ-01A 2 3 CDS-5'UTR Intra-chr p36.22 p36.22 24768 ChimerSeq STARFusion TCGA_RNA-Seq PHTF1-PTPN22 PHTF1 chr1 114300321 - PTPN22 chr1 114362276 - Exonic hg19 CESC TCGA-C5-A3HD-01B 1066 4975 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 24769 ChimerSeq STARFusion TCGA_RNA-Seq RSBN1-PTPN22 RSBN1 chr1 114354332 - PTPN22 chr1 114362276 - Exonic hg19 CESC TCGA-C5-A3HD-01B 612 2563 In-Frame Intra-chr p13.2 p13.2 Seq+ 24770 ChimerSeq STARFusion TCGA_RNA-Seq PHTF1-RSBN1 PHTF1 chr1 114300321 - RSBN1 chr1 114340658 - Exonic hg19 CESC TCGA-C5-A3HD-01B 77 278 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 24771 ChimerSeq STARFusion TCGA_RNA-Seq PHTF1-RSBN1 PHTF1 chr1 114300321 - RSBN1 chr1 114306542 - Exonic hg19 CESC TCGA-C5-A3HD-01B 14 278 CDS-3'UTR Intra-chr p13.2 p13.2 Seq+ 24772 ChimerSeq STARFusion TCGA_RNA-Seq GGNBP2-NEBL GGNBP2 chr17 34901666 + NEBL chr10 21101869 - Exonic hg19 CESC TCGA-C5-A3HD-01B 36 154 In-Frame Inter-chr Tumor suppressor gene p12.31 Seq+ 24773 ChimerSeq STARFusion TCGA_RNA-Seq GGNBP2-NEBL GGNBP2 chr17 34900946 + NEBL chr10 21101869 - Exonic hg19 CESC TCGA-C5-A3HD-01B 4 154 5'UTR-CDS Inter-chr Tumor suppressor gene p12.31 Seq+ 24774 ChimerSeq STARFusion TCGA_RNA-Seq MEN1-PTPRJ MEN1 chr11 64577137 - PTPRJ chr11 48149332 + Exonic hg19 CESC TCGA-C5-A3HD-01B 9 63 In-Frame Intra-chr q13.1 Oncogene Tumor suppressor gene p11.2 Tumor suppressor gene Seq+ 24775 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB6-UBE3C DNAJB6 chr7 157129838 + UBE3C chr7 157046648 + Exonic hg19 CESC TCGA-C5-A3HD-01B 4 45 5'UTR-CDS Intra-chr q36.3 q36.3 24776 ChimerSeq STARFusion TCGA_RNA-Seq FAM177A1-PSMA6 FAM177A1 chr14 35515834 + PSMA6 chr14 35786455 + Exonic hg19 CESC TCGA-C5-A3HD-01B 3 5 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 24777 ChimerSeq STARFusion TCGA_RNA-Seq LDLR-CALR LDLR chr19 11227674 + CALR chr19 13049948 + Exonic hg19 CESC TCGA-VS-A8Q9-01A 17 29 Out-of-frame Intra-chr p13.2 p13.13 Seq+ 24778 ChimerSeq STARFusion TCGA_RNA-Seq ZNF700-TEX101 ZNF700 chr19 12036088 + TEX101 chr19 43920033 + Exonic hg19 CESC TCGA-VS-A8Q9-01A 6 47 In-Frame Intra-chr p13.2 Transcription factor q13.31 Seq+ 24779 ChimerSeq STARFusion TCGA_RNA-Seq CALR-ZNF799 CALR chr19 13051701 + ZNF799 chr19 12504237 - Exonic hg19 CESC TCGA-VS-A8Q9-01A 4 20 In-Frame Intra-chr p13.13 p13.2 Transcription factor Seq+ 24780 ChimerSeq STARFusion TCGA_RNA-Seq YWHAG-SRCRB4D YWHAG chr7 75988039 - SRCRB4D chr7 76038875 - Exonic hg19 CESC TCGA-VS-A8Q9-01A 4 6 CDS-5'UTR Intra-chr q11.23 24781 ChimerSeq STARFusion TCGA_RNA-Seq PPP5C-GADD45GIP1 PPP5C chr19 46879831 + GADD45GIP1 chr19 13065340 - Exonic hg19 CESC TCGA-VS-A8Q9-01A 2 9 Out-of-frame Intra-chr q13.32 p13.13 Tumor suppressor gene Seq+ 24782 ChimerSeq STARFusion TCGA_RNA-Seq EMP2-SNN EMP2 chr16 10641397 - SNN chr16 11769831 + Exonic hg19 CESC TCGA-DG-A2KH-01A 41 122 CDS-5'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 24783 ChimerSeq STARFusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23721965 - APOO chrX 23876850 - Exonic hg19 CESC TCGA-DG-A2KH-01A 4 32 3'UTR-3'UTR Intra-chr p22.11 p22.11 Seq+ 24784 ChimerSeq STARFusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23721940 - APOO chrX 23876850 - Exonic hg19 CESC TCGA-DG-A2KH-01A 3 32 3'UTR-3'UTR Intra-chr p22.11 p22.11 Seq+ 24785 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80950355 - MRPS28 chr8 80831383 - Exonic hg19 CESC TCGA-DG-A2KH-01A 3 21 Out-of-frame Intra-chr q21.13 q21.13 24786 ChimerSeq STARFusion TCGA_RNA-Seq CAPNS1-HAMP CAPNS1 chr19 36637214 + HAMP chr19 35775692 + Exonic hg19 CESC TCGA-DG-A2KH-01A 2 7 Out-of-frame Intra-chr q13.12 q13.12 24787 ChimerSeq STARFusion TCGA_RNA-Seq GRIN2A-CPPED1 GRIN2A chr16 9934504 - CPPED1 chr16 12798906 - Exonic hg19 CESC TCGA-DG-A2KH-01A 2 1 In-Frame Intra-chr p13.2 Tumor suppressor gene p13.12 24788 ChimerSeq STARFusion TCGA_RNA-Seq ECT2-FNDC3B ECT2 chr3 172491812 + FNDC3B chr3 172080423 + Exonic hg19 CESC TCGA-ZJ-AAXU 2 1 Out-of-frame Intra-chr q26.31 Tumor suppressor gene q26.31 24789 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-SLC25A17 MKL1 chr22 41032482 - SLC25A17 chr22 41175129 - Exonic hg19 CESC TCGA-UC-A7PF-01A 2 24 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 24790 ChimerSeq STARFusion TCGA_RNA-Seq RALY-SLC24A3 RALY chr20 32581937 + SLC24A3 chr20 19560644 + Exonic hg19 CESC TCGA-UC-A7PF-01A 2 13 5'UTR-CDS Intra-chr q11.22 p11.23 Seq+ 24791 ChimerSeq STARFusion TCGA_RNA-Seq TTLL10-CTAG2 TTLL10 chr1 1120489 + CTAG2 chrX 153880541 - Exonic hg19 CESC TCGA-Q1-A73P-01A 7 37 Out-of-frame Inter-chr p36.33 q28 Seq+ 24792 ChimerSeq STARFusion TCGA_RNA-Seq TTLL10-CTAG1A TTLL10 chr1 1120489 + CTAG1A chrX 153846155 - Exonic hg19 CESC TCGA-Q1-A73P-01A 11 8 Out-of-frame Inter-chr p36.33 q28 24793 ChimerSeq STARFusion TCGA_RNA-Seq TTLL10-CTAG1B TTLL10 chr1 1120489 + CTAG1B chrX 153846155 - Exonic hg19 CESC TCGA-Q1-A73P-01A 11 8 CDS-3'UTR Inter-chr p36.33 q28 Seq+ 24794 ChimerSeq STARFusion TCGA_RNA-Seq MUC4-TNK2 MUC4 chr3 195495893 - TNK2 chr3 195610180 - Exonic hg19 CESC TCGA-C5-A8XK-01A 7 18 Out-of-frame Intra-chr q29 Oncogene Seq+ 24795 ChimerSeq STARFusion TCGA_RNA-Seq TRPM4-PPFIA3 TRPM4 chr19 49675365 + PPFIA3 chr19 49636258 + Exonic hg19 CESC TCGA-C5-A8XK-01A 4 6 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 24796 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-RNFT1 RPS6KB1 chr17 57992064 + RNFT1 chr17 58030407 - Exonic hg19 CESC TCGA-C5-A907-01A 34 135 In-Frame Intra-chr q23.1 Oncogene q23.1 Seq+ 24797 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-RPS6KB1 BCAS3 chr17 58755275 + RPS6KB1 chr17 57990045 + Exonic hg19 CESC TCGA-C5-A907-01A 33 39 5'UTR-CDS Intra-chr q23.2 q23.1 Oncogene Seq+ 24798 ChimerSeq STARFusion TCGA_RNA-Seq VRK3-PPP6R1 VRK3 chr19 50504047 - PPP6R1 chr19 55753856 - Exonic hg19 CESC TCGA-C5-A907-01A 7 43 In-Frame Intra-chr q13.33 CK1:VRK q13.42 Seq+ 24799 ChimerSeq STARFusion TCGA_RNA-Seq LSM14A-KNDC1 LSM14A chr19 34663668 + KNDC1 chr10 134996848 + Exonic hg19 CESC TCGA-C5-A907-01A 4 26 Out-of-frame Inter-chr q26.3 Seq+ 24800 ChimerSeq STARFusion TCGA_RNA-Seq ZNF677-WDR88 ZNF677 chr19 53758087 - WDR88 chr19 33666302 + Exonic hg19 CESC TCGA-C5-A907-01A 8 4 5'UTR-CDS Intra-chr q13.42 Transcription factor q13.11 Seq+ 24801 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R12C-PTMS PPP1R12C chr19 55610152 - PTMS chr12 6878769 + Exonic hg19 CESC TCGA-C5-A907-01A 2 0 In-Frame Inter-chr q13.42 p13.31 24802 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-E4F1 ANKRD11 chr16 89556653 - E4F1 chr16 2278373 + Exonic hg19 CESC TCGA-FU-A3TQ-01A 11 13 5'UTR-CDS Intra-chr q24.3 p13.3 Transcription factor Seq+ 24803 ChimerSeq STARFusion TCGA_RNA-Seq PDPK1-UBALD1 PDPK1 chr16 2588137 + UBALD1 chr16 4660556 - Exonic hg19 CESC TCGA-FU-A3TQ-01A 5 13 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 24804 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 CESC TCGA-FU-A3TQ-01A 3 2 3'UTR-5'UTR Intra-chr q34 24805 ChimerSeq STARFusion TCGA_RNA-Seq BCL3-APOE BCL3 chr19 45254637 + APOE chr19 45412285 + Exonic hg19 CESC TCGA-JX-A5QV-01A 172 761 In-Frame Intra-chr q13.32 Oncogene q13.32 Seq+ 24806 ChimerSeq STARFusion TCGA_RNA-Seq BCL3-GRIK4 BCL3 chr19 45252303 + GRIK4 chr11 120686087 + Exonic hg19 CESC TCGA-JX-A5QV-01A 7 14 In-Frame Inter-chr q13.32 Oncogene q23.3 Seq+ 24807 ChimerSeq STARFusion TCGA_RNA-Seq SLC2A1-LEPRE1 SLC2A1 chr1 43408897 - LEPRE1 chr1 43228146 - Exonic hg19 CESC TCGA-JX-A5QV-01A 5 7 In-Frame Intra-chr p34.2 24808 ChimerSeq STARFusion TCGA_RNA-Seq BCL3-GRIK4 BCL3 chr19 45261670 + GRIK4 chr11 120686087 + Exonic hg19 CESC TCGA-JX-A5QV-01A 2 14 Out-of-frame Inter-chr q13.32 Oncogene q23.3 Seq+ 24809 ChimerSeq STARFusion TCGA_RNA-Seq NXN-ABR NXN chr17 882559 - ABR chr17 916404 - Exonic hg19 CESC TCGA-EK-A2RO-01A 7 22 In-Frame Intra-chr p13.3 p13.3 Seq+ 24810 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V1C2-CTSB ATP6V1C2 chr2 10924094 + CTSB chr8 11702249 - Exonic hg19 CESC TCGA-Q1-A5R3-01A 3 1 Out-of-frame Inter-chr p25.1 p23.1 24811 ChimerSeq STARFusion TCGA_RNA-Seq VEGFA-RSPH9 VEGFA chr6 43746655 + RSPH9 chr6 43638526 + Exonic hg19 CESC TCGA-DS-A3LQ-01A 37 134 In-Frame Intra-chr p21.1 Tumor suppressor gene p21.1 Seq+ 24812 ChimerSeq STARFusion TCGA_RNA-Seq FZD6-BAALC FZD6 chr8 104312512 + BAALC chr8 104240217 + Exonic hg19 CESC TCGA-DS-A3LQ-01A 27 84 In-Frame Intra-chr q22.3 q22.3 Seq+ 24813 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 CESC TCGA-DS-A3LQ-01A 5 47 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 24814 ChimerSeq STARFusion TCGA_RNA-Seq ZNF148-SNX4 ZNF148 chr3 125093946 - SNX4 chr3 125223588 - Exonic hg19 CESC TCGA-DS-A3LQ-01A 10 17 5'UTR-CDS Intra-chr q21.2 Transcription factor q21.2 Seq+ 24815 ChimerSeq STARFusion TCGA_RNA-Seq SP3-OLA1 SP3 chr2 174819601 - OLA1 chr2 175006728 - Exonic hg19 CESC TCGA-DS-A3LQ-01A 3 36 In-Frame Intra-chr q31.1 Transcription factor q31.1 Seq+ 24816 ChimerSeq STARFusion TCGA_RNA-Seq GSR-GTF2E2 GSR chr8 30553897 - GTF2E2 chr8 30437913 - Exonic hg19 CESC TCGA-DS-A3LQ-01A 5 26 Out-of-frame Intra-chr p12 p12 24817 ChimerSeq STARFusion TCGA_RNA-Seq LOC100288778-WASH3P LOC100288778 chr12 89018 + WASH3P chr15 102515210 + Exonic hg19 CESC TCGA-DS-A3LQ-01A 7 17 5'UTR-5'UTR Inter-chr q26.3 24818 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0930-SMC1B KIAA0930 chr22 45607837 - SMC1B chr22 45741450 - Exonic hg19 CESC TCGA-DS-A3LQ-01A 5 12 In-Frame Intra-chr q13.31 q13.31 Seq+ 24819 ChimerSeq STARFusion TCGA_RNA-Seq HECTD1-HEATR5A HECTD1 chr14 31675003 - HEATR5A chr14 31795548 - Exonic hg19 CESC TCGA-DS-A3LQ-01A 3 17 Out-of-frame Intra-chr q12 q12 Seq+ 24820 ChimerSeq STARFusion TCGA_RNA-Seq HEATR5A-HECTD1 HEATR5A chr14 31889675 - HECTD1 chr14 31598510 - Exonic hg19 CESC TCGA-DS-A3LQ-01A 3 11 Out-of-frame Intra-chr q12 q12 24821 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-TXN2 MYH9 chr22 36737415 - TXN2 chr22 36863964 - Exonic hg19 CESC TCGA-DS-A3LQ-01A 3 11 Out-of-frame Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Seq+ 24822 ChimerSeq STARFusion TCGA_RNA-Seq TPD52L1-RNF217 TPD52L1 chr6 125475116 + RNF217 chr6 125397803 + Exonic hg19 CESC TCGA-DS-A3LQ-01A 3 11 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 24823 ChimerSeq STARFusion TCGA_RNA-Seq RAF1-RPL32 RAF1 chr3 12705312 - RPL32 chr3 12877722 - Exonic hg19 CESC TCGA-DS-A3LQ-01A 2 10 5'UTR-CDS Intra-chr p25.2 TKL:RAF Oncogene p25.2 Seq+ 24824 ChimerSeq STARFusion TCGA_RNA-Seq MATN2-LAPTM4B MATN2 chr8 98954127 + LAPTM4B chr8 98827556 + Exonic hg19 CESC TCGA-DS-A3LQ-01A 3 1 In-Frame Intra-chr q22.1 q22.1 Seq+ 24825 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA1-TACC2 PLEKHA1 chr10 124183779 + TACC2 chr10 124013506 + Exonic hg19 CESC TCGA-DS-A3LQ-01A 2 5 Out-of-frame Intra-chr q26.13 q26.13 24826 ChimerSeq STARFusion TCGA_RNA-Seq PANK4-TTC34 PANK4 chr1 2449603 - TTC34 chr1 2577002 - Exonic hg19 CESC TCGA-DS-A3LQ-01A 2 3 In-Frame Intra-chr p36.32 Seq+ 24827 ChimerSeq STARFusion TCGA_RNA-Seq ZNF185-NSDHL ZNF185 chrX 152128440 + NSDHL chrX 152014826 + Exonic hg19 CESC TCGA-DS-A3LQ-01A 2 2 CDS-5'UTR Intra-chr q28 Tumor suppressor gene q28 24828 ChimerSeq STARFusion TCGA_RNA-Seq LMAN2L-FAM178B LMAN2L chr2 97399256 - FAM178B chr2 97544230 - Exonic hg19 CESC TCGA-EA-A439 2 7 In-Frame Intra-chr q11.2 q11.2 Seq+ 24829 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 CESC TCGA-ZJ-AAXT 682 1428 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 24830 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 CESC TCGA-VS-A9UD 46 101 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 24831 ChimerSeq STARFusion TCGA_RNA-Seq LRPPRC-THADA LRPPRC chr2 44126358 - THADA chr2 43460021 - Exonic hg19 CESC TCGA-2W-A8YY-01A 2 2 Out-of-frame Intra-chr p21 p21 24832 ChimerSeq STARFusion TCGA_RNA-Seq SH3GLB1-CLCA1 SH3GLB1 chr1 87181548 + CLCA1 chr1 86934704 + Exonic hg19 CESC TCGA-JX-A3PZ-01A 18 48 Out-of-frame Intra-chr p22.3 Tumor suppressor gene p22.3 Seq+ 24833 ChimerSeq STARFusion TCGA_RNA-Seq SH3GLB1-CLCA1 SH3GLB1 chr1 87170654 + CLCA1 chr1 86934704 + Exonic hg19 CESC TCGA-JX-A3PZ-01A 5 48 In-Frame Intra-chr p22.3 Tumor suppressor gene p22.3 Seq+ 24834 ChimerSeq STARFusion TCGA_RNA-Seq RASSF8-ETNK1 RASSF8 chr12 26148063 + ETNK1 chr12 22796697 + Exonic hg19 CESC TCGA-BI-A0VS-01A 8 83 5'UTR-CDS Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 24835 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF4-PLAGL2 TM9SF4 chr20 30749168 + PLAGL2 chr20 30790095 - Exonic hg19 CESC TCGA-BI-A0VS-01A 2 6 CDS-5'UTR Intra-chr q11.21 q11.21 Transcription factor Seq+ 24836 ChimerSeq STARFusion TCGA_RNA-Seq CHD2-LOC100507217 CHD2 chr15 93444529 + LOC100507217 chr15 93428745 + Exonic hg19 CESC TCGA-BI-A0VS-01A 3 1 CDS-5'UTR Intra-chr q26.1 24837 ChimerSeq STARFusion TCGA_RNA-Seq TMX1-LINC00640 TMX1 chr14 51716483 + LINC00640 chr14 51832081 + Exonic hg19 CESC TCGA-VS-A9U5 2 33 Out-of-frame Intra-chr q22.1 q22.1 24838 ChimerSeq STARFusion TCGA_RNA-Seq PAPOLA-VRK1 PAPOLA chr14 96968937 + VRK1 chr14 97299804 + Exonic hg19 CESC TCGA-FU-A3HY-01A 3 0 CDS-5'UTR Intra-chr q32.2 q32.2 CK1:VRK 24839 ChimerSeq STARFusion TCGA_RNA-Seq GPI-KIAA0355 GPI chr19 34868786 + KIAA0355 chr19 34824609 + Exonic hg19 CESC TCGA-EA-A5O9-01A 3 7 In-Frame Intra-chr 24840 ChimerSeq STARFusion TCGA_RNA-Seq SFN-YWHAG SFN chr1 27190112 + YWHAG chr7 75959255 - Exonic hg19 CESC TCGA-EA-A5O9-01A 3 2 Out-of-frame Inter-chr p36.11 Tumor suppressor gene q11.23 24841 ChimerSeq STARFusion TCGA_RNA-Seq TTLL5-IFT43 TTLL5 chr14 76259443 + IFT43 chr14 76488670 + Exonic hg19 CESC TCGA-EA-A5O9-01A 2 1 In-Frame Intra-chr q24.3 q24.3 Seq+ 24842 ChimerSeq STARFusion TCGA_RNA-Seq TCTEX1D2-IQCG TCTEX1D2 chr3 196022877 - IQCG chr3 197619630 - Exonic hg19 CESC TCGA-C5-A8XI-01A 2 2 In-Frame Intra-chr q29 q29 24843 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 CESC TCGA-C5-A8XI-01A 2 1 In-Frame Intra-chr p11.21 p11.21 24844 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R12C-CNN2 PPP1R12C chr19 55610152 - CNN2 chr19 1036129 + Exonic hg19 CESC TCGA-C5-A8XI-01A 2 0 In-Frame Intra-chr q13.42 p13.3 Seq+ 24845 ChimerSeq STARFusion TCGA_RNA-Seq ZNF227-HNRNPUL1 ZNF227 chr19 44722005 + HNRNPUL1 chr19 41798150 + Exonic hg19 CESC TCGA-JW-A5VI-01A 58 714 In-Frame Intra-chr q13.31 Transcription factor q13.2 Seq+ 24846 ChimerSeq STARFusion TCGA_RNA-Seq ZNF227-HNRNPUL1 ZNF227 chr19 44717397 + HNRNPUL1 chr19 41798150 + Exonic hg19 CESC TCGA-JW-A5VI-01A 17 714 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.2 Seq+ 24847 ChimerSeq STARFusion TCGA_RNA-Seq ZNF233-HNRNPUL1 ZNF233 chr19 44768528 + HNRNPUL1 chr19 41798150 + Exonic hg19 CESC TCGA-JW-A5VI-01A 32 0 In-Frame Intra-chr q13.31 Transcription factor q13.2 Seq+ 24848 ChimerSeq STARFusion TCGA_RNA-Seq HID1-SRP68 HID1 chr17 72968686 - SRP68 chr17 74057655 - Exonic hg19 CESC TCGA-JW-A5VI-01A 8 33 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 24849 ChimerSeq STARFusion TCGA_RNA-Seq KIF2C-C1orf228 KIF2C chr1 45219505 + C1orf228 chr1 45189794 + Exonic hg19 CESC TCGA-JW-A5VI-01A 2 5 Out-of-frame Intra-chr p34.1 p34.1 Seq+ 24850 ChimerSeq STARFusion TCGA_RNA-Seq FXR1-NAALADL2 FXR1 chr3 180653019 + NAALADL2 chr3 175165017 + Exonic hg19 CESC TCGA-C5-A1ML-01A 11 30 Out-of-frame Intra-chr q26.33 q26.31 Seq+ 24851 ChimerSeq STARFusion TCGA_RNA-Seq ITGA2-GPX8 ITGA2 chr5 52285362 + GPX8 chr5 54456158 + Exonic hg19 CESC TCGA-FU-A2QG-01A 7 97 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 24852 ChimerSeq STARFusion TCGA_RNA-Seq SUGT1-NOL6 SUGT1 chr13 53237247 + NOL6 chr9 33472410 - Exonic hg19 CESC TCGA-FU-A2QG-01A 3 6 In-Frame Inter-chr q14.3 p13.3 24853 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-COX6C VPS13B chr8 100026163 + COX6C chr8 100899846 - Exonic hg19 CESC TCGA-C5-A1MF-01A 3 1 In-Frame Intra-chr q22.2 q22.2 24854 ChimerSeq STARFusion TCGA_RNA-Seq NUF2-RFWD2 NUF2 chr1 163298697 + RFWD2 chr1 175916375 - Exonic hg19 CESC TCGA-C5-A1MF-01A 2 1 Out-of-frame Intra-chr q23.3 q25.2 Tumor suppressor gene 24855 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KA3-MAP7D2 RPS6KA3 chrX 20284682 - MAP7D2 chrX 20082923 - Exonic hg19 CESC TCGA-EA-A411-01A 11 15 Out-of-frame Intra-chr p22.12 p22.12 Seq+ 24856 ChimerSeq STARFusion TCGA_RNA-Seq PHF21A-TMEM123 PHF21A chr11 46098305 - TMEM123 chr11 102272937 - Exonic hg19 CESC TCGA-EA-A411-01A 5 9 Out-of-frame Intra-chr p11.2 Transcription factor q22.2 Seq+ 24857 ChimerSeq STARFusion TCGA_RNA-Seq AGSK1-LOC388152 AGSK1 chr15 82764746 - LOC388152 chr15 84868720 - Exonic hg19 CESC TCGA-C5-A1BI-01B 3 19 Out-of-frame Intra-chr 24858 ChimerSeq STARFusion TCGA_RNA-Seq RB1-ITM2B RB1 chr13 48881542 + ITM2B chr13 48827944 + Exonic hg19 CESC TCGA-C5-A1BI-01B 2 3 In-Frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Seq+ 24859 ChimerSeq STARFusion TCGA_RNA-Seq USP6NL-MIR205HG USP6NL chr10 11639630 - MIR205HG chr1 209602526 + Exonic hg19 CESC TCGA-C5-A1BI-01B 2 1 CDS-5'UTR Inter-chr p14 q32.2 24860 ChimerSeq STARFusion TCGA_RNA-Seq AGSK1-LOC388152 AGSK1 chr15 82764745 - LOC388152 chr15 84868719 - Exonic hg19 CESC TCGA-FU-A23L-01A 9 20 Out-of-frame Intra-chr 24861 ChimerSeq STARFusion TCGA_RNA-Seq PABPC1L-YWHAB PABPC1L chr20 43566832 + YWHAB chr20 43530172 + Exonic hg19 CESC TCGA-FU-A23L-01A 2 17 CDS-5'UTR Intra-chr q13.12 q13.12 KB Seq+ 24862 ChimerSeq STARFusion TCGA_RNA-Seq SDAD1-CXCL9 SDAD1 chr4 76902525 - CXCL9 chr4 76927427 - Exonic hg19 CESC TCGA-FU-A23L-01A 2 9 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 24863 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57763169 + VMP1 chr17 57886157 + Exonic hg19 CESC TCGA-C5-A1BK-01B 60 147 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 24864 ChimerSeq STARFusion TCGA_RNA-Seq ITCH-DYNLRB1 ITCH chr20 33001685 + DYNLRB1 chr20 33128385 + Exonic hg19 CESC TCGA-C5-A1BK-01B 2 1 In-Frame Intra-chr q11.22 q11.22 Seq+ 24865 ChimerSeq STARFusion TCGA_RNA-Seq PSEN1-ANXA1 PSEN1 chr14 73678650 + ANXA1 chr9 75783948 + Exonic hg19 CESC TCGA-C5-A1BK-01B 2 1 Out-of-frame Inter-chr q24.2 q21.13 Tumor suppressor gene 24866 ChimerSeq STARFusion TCGA_RNA-Seq POLR2J3-UPK3BL POLR2J3 chr7 102178767 - UPK3BL chr7 102278022 - Exonic hg19 CESC TCGA-Q1-A73S-01A 3 47 Out-of-frame Intra-chr q22.1 24867 ChimerSeq STARFusion TCGA_RNA-Seq LOC220729-SDHAP1 LOC220729 chr3 197348575 - SDHAP1 chr3 195709181 - Exonic hg19 CESC TCGA-EA-A3HS-01A 2 6 3'UTR-3'UTR Intra-chr q29 24868 ChimerSeq STARFusion TCGA_RNA-Seq EXOC6B-PCCB EXOC6B chr2 73052927 - PCCB chr3 136045645 + Exonic hg19 CESC TCGA-VS-A953-01A 17 28 Out-of-frame Inter-chr p13.2 q22.3 Seq+ 24869 ChimerSeq STARFusion TCGA_RNA-Seq LITAF-BCAR4 LITAF chr16 11680742 - BCAR4 chr16 11914154 - Exonic hg19 CESC TCGA-VS-A953-01A 19 17 5'UTR-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 24870 ChimerSeq STARFusion TCGA_RNA-Seq ABCC1-C16orf45 ABCC1 chr16 16043656 + C16orf45 chr16 15609162 + Exonic hg19 CESC TCGA-VS-A953-01A 13 27 Out-of-frame Intra-chr Seq+ 24871 ChimerSeq STARFusion TCGA_RNA-Seq CDH13-TXNDC11 CDH13 chr16 82660742 + TXNDC11 chr16 11785938 - Exonic hg19 CESC TCGA-VS-A953-01A 2 65 In-Frame Intra-chr q23.3 Tumor suppressor gene p13.13 Seq+ 24872 ChimerSeq STARFusion TCGA_RNA-Seq CDH13-TXNDC11 CDH13 chr16 82660742 + TXNDC11 chr16 11794420 - Exonic hg19 CESC TCGA-VS-A953-01A 2 65 Out-of-frame Intra-chr q23.3 Tumor suppressor gene p13.13 Seq+ 24873 ChimerSeq STARFusion TCGA_RNA-Seq ELMSAN1-NUMB ELMSAN1 chr14 74203701 - NUMB chr14 73876776 - Exonic hg19 CESC TCGA-VS-A953-01A 2 28 Out-of-frame Intra-chr q24.3 q24.3 Tumor suppressor gene Seq+ 24874 ChimerSeq STARFusion TCGA_RNA-Seq LITAF-BCAR4 LITAF chr16 11681194 - BCAR4 chr16 11914154 - Exonic hg19 CESC TCGA-VS-A953-01A 2 17 3'UTR-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 24875 ChimerSeq STARFusion TCGA_RNA-Seq SOD2-CHMP1A SOD2 chr6 160113693 - CHMP1A chr16 89713739 - Exonic hg19 CESC TCGA-VS-A953-01A 2 0 In-Frame Inter-chr q25.3 Tumor suppressor gene q24.3 24876 ChimerSeq STARFusion TCGA_RNA-Seq PPTC7-GPN3 PPTC7 chr12 111020614 - GPN3 chr12 110895439 - Exonic hg19 CESC TCGA-EA-A3QD-01A 7 20 In-Frame Intra-chr q24.11 q24.11 Seq+ 24877 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 CESC TCGA-EA-A3QD-01A 4 2 3'UTR-5'UTR Intra-chr q34 24878 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB6-B2M DNAJB6 chr7 157178305 + B2M chr15 45007621 + Exonic hg19 CESC TCGA-EA-A3QD-01A 2 1 In-Frame Inter-chr q36.3 Oncogene 24879 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57742270 + VMP1 chr17 57886157 + Exonic hg19 CESC TCGA-C5-A8YR-01A 11 47 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 24880 ChimerSeq STARFusion TCGA_RNA-Seq CALD1-TMEM140 CALD1 chr7 134552555 + TMEM140 chr7 134849170 + Exonic hg19 CESC TCGA-C5-A8YR-01A 2 25 CDS-5'UTR Intra-chr q33 q33 Seq+ 24881 ChimerSeq STARFusion TCGA_RNA-Seq CALD1-TMEM140 CALD1 chr7 134576424 + TMEM140 chr7 134849170 + Exonic hg19 CESC TCGA-C5-A8YR-01A 2 25 CDS-5'UTR Intra-chr q33 q33 Seq+ 24882 ChimerSeq STARFusion TCGA_RNA-Seq VWA8-MYO5C VWA8 chr13 42407507 - MYO5C chr15 52498163 - Exonic hg19 CESC TCGA-C5-A8YR-01A 2 3 Out-of-frame Inter-chr q14.11 q21.2 24883 ChimerSeq STARFusion TCGA_RNA-Seq MYLIP-GMPR MYLIP chr6 16144095 + GMPR chr6 16279016 + Exonic hg19 CESC TCGA-JW-A69B-01A 8 34 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 24884 ChimerSeq STARFusion TCGA_RNA-Seq SFN-YWHAG SFN chr1 27190112 + YWHAG chr7 75959255 - Exonic hg19 CESC TCGA-HM-A4S6-01A 3 3 Out-of-frame Inter-chr p36.11 Tumor suppressor gene q11.23 24885 ChimerSeq STARFusion TCGA_RNA-Seq SUGP2-MEF2B SUGP2 chr19 19135428 - MEF2B chr19 19261573 - Exonic hg19 CESC TCGA-UC-A7PD-01A 27 109 CDS-5'UTR Intra-chr p13.11 p13.11 Transcription factor Seq+ 24886 ChimerSeq STARFusion TCGA_RNA-Seq AGRN-BAD AGRN chr1 957842 + BAD chr11 64039275 - Exonic hg19 CESC TCGA-UC-A7PD-01A 22 98 In-Frame Inter-chr p36.33 q13.1 Seq+ 24887 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57763169 + VMP1 chr17 57886157 + Exonic hg19 CESC TCGA-UC-A7PD-01A 2 16 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 24888 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890980 - BCAR4 chr16 11914154 - Exonic hg19 CESC TCGA-C5-A1MJ-01A 10 51 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 24889 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890980 - BCAR4 chr16 11915612 - Exonic hg19 CESC TCGA-C5-A1MJ-01A 5 51 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 24890 ChimerSeq STARFusion TCGA_RNA-Seq SNX29-CIITA SNX29 chr16 12172772 + CIITA chr16 10989139 + Exonic hg19 CESC TCGA-C5-A1MJ-01A 4 19 In-Frame Intra-chr p13.13 p13.13 Seq+ 24891 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-NDUFAF2 KANSL1 chr17 44230270 - NDUFAF2 chr5 60368952 + Exonic hg19 CESC TCGA-MY-A5BF 2 1 Out-of-frame Inter-chr q12.1 24892 ChimerSeq STARFusion TCGA_RNA-Seq SPEN-DNAJC16 SPEN chr1 16174645 + DNAJC16 chr1 15886021 + Exonic hg19 CESC TCGA-C5-A3HF-01A 13 14 Out-of-frame Intra-chr p36.21 Transcription factor p36.21 Seq+ 24893 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890980 - BCAR4 chr16 11914154 - Exonic hg19 CESC TCGA-C5-A3HF-01A 5 21 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 24894 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890980 - BCAR4 chr16 11915612 - Exonic hg19 CESC TCGA-C5-A3HF-01A 2 21 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 24895 ChimerSeq STARFusion TCGA_RNA-Seq CMTM4-DYNC1LI2 CMTM4 chr16 66657307 - DYNC1LI2 chr16 66770147 - Exonic hg19 CESC TCGA-C5-A3HF-01A 3 7 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 24896 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125699 - CXCL16 chr17 4637313 - Exonic hg19 CESC TCGA-VS-A9V3 3 1 Out-of-frame Inter-chr q12.2 p13.2 24897 ChimerSeq STARFusion TCGA_RNA-Seq PLXNB2-ST3GAL1 PLXNB2 chr22 50718434 - ST3GAL1 chr8 134511432 - Exonic hg19 CESC TCGA-VS-A9V0 15 51 CDS-5'UTR Inter-chr q13.33 q24.22 Seq+ 24898 ChimerSeq STARFusion TCGA_RNA-Seq OGFOD3-EIF1 OGFOD3 chr17 80369331 - EIF1 chr17 39847034 + Exonic hg19 CESC TCGA-VS-A9V0 10 17 Out-of-frame Intra-chr q25.3 q21.2 Seq+ 24899 ChimerSeq STARFusion TCGA_RNA-Seq FOXK2-AMBRA1 FOXK2 chr17 80478183 + AMBRA1 chr11 46419493 - Exonic hg19 CESC TCGA-VS-A9V0 2 5 Out-of-frame Inter-chr q25.3 Transcription factor p11.2 Seq+ 24900 ChimerSeq STARFusion TCGA_RNA-Seq S100P-BZW2 S100P chr4 6695797 + BZW2 chr7 16714037 + Exonic hg19 CESC TCGA-VS-A9V0 2 0 Out-of-frame Inter-chr p16.1 p21.1 Seq+ 24901 ChimerSeq STARFusion TCGA_RNA-Seq DTX3L-FAM162A DTX3L chr3 122289519 + FAM162A chr3 122126128 + Exonic hg19 CESC TCGA-VS-A9UV 2 6 In-Frame Intra-chr q21.1 q21.1 Seq+ 24902 ChimerSeq STARFusion TCGA_RNA-Seq STIP1-POLR2G STIP1 chr11 63960759 + POLR2G chr11 62532654 + Exonic hg19 CESC TCGA-EA-A4BA-01A 3 1 In-Frame Intra-chr q13.1 q12.3 24903 ChimerSeq STARFusion TCGA_RNA-Seq BTBD3-RRBP1 BTBD3 chr20 11871602 + RRBP1 chr20 17623772 - Exonic hg19 CESC TCGA-EA-A4BA-01A 2 1 5'UTR-CDS Intra-chr p12.2 p12.1 24904 ChimerSeq STARFusion TCGA_RNA-Seq TMSB10-ARMCX2 TMSB10 chr2 85133241 + ARMCX2 chrX 100914122 - Exonic hg19 CESC TCGA-EA-A4BA-01A 2 1 CDS-5'UTR Inter-chr p11.2 q22.1 24905 ChimerSeq STARFusion TCGA_RNA-Seq TRAF3-SFXN1 TRAF3 chr14 103296809 + SFXN1 chr5 174919098 + Exonic hg19 CESC TCGA-C5-A8XH-01A 5 9 5'UTR-5'UTR Inter-chr q32.32 q35.2 Seq+ 24906 ChimerSeq STARFusion TCGA_RNA-Seq RXRA-BCAS3 RXRA chr9 137218505 + BCAS3 chr17 58945937 + Exonic hg19 CESC TCGA-C5-A8XH-01A 3 5 Out-of-frame Inter-chr q34.2 Transcription factor q23.2 Seq+ 24907 ChimerSeq STARFusion TCGA_RNA-Seq ATP5G1-KRT8 ATP5G1 chr17 46971811 + KRT8 chr12 53292683 - Exonic hg19 CESC TCGA-C5-A1ME-01A 2 1 In-Frame Inter-chr q21.32 q13.13 24908 ChimerSeq STARFusion TCGA_RNA-Seq CEP192-PRPSAP2 CEP192 chr18 12991436 + PRPSAP2 chr17 18827227 + Exonic hg19 CESC TCGA-C5-A1ME-01A 2 1 5'UTR-CDS Inter-chr p11.21 p11.2 24909 ChimerSeq STARFusion TCGA_RNA-Seq PLXDC2-CDC123 PLXDC2 chr10 20290915 + CDC123 chr10 12257739 + Exonic hg19 CESC TCGA-C5-A1ME-01A 2 1 In-Frame Intra-chr p12.31 p14 24910 ChimerSeq STARFusion TCGA_RNA-Seq DSP-RCAN2 DSP chr6 7572301 + RCAN2 chr6 46216633 - Exonic hg19 CESC TCGA-DG-A2KL-01A 78 505 In-Frame Intra-chr p24.3 Tumor suppressor gene p12.3 Seq+ 24911 ChimerSeq STARFusion TCGA_RNA-Seq SORBS1-LOC728558 SORBS1 chr10 97321077 - LOC728558 chr10 97516476 - Exonic hg19 CESC TCGA-C5-A1M8-01A 6 1 5'UTR-3'UTR Intra-chr q24.1 24912 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1-RHOD SIPA1 chr11 65415129 + RHOD chr11 66833367 + Exonic hg19 CESC TCGA-C5-A1M8-01A 4 6 Out-of-frame Intra-chr q13.1 q13.2 Seq+ 24913 ChimerSeq STARFusion TCGA_RNA-Seq MMP12-WTAPP1 MMP12 chr11 102737046 - WTAPP1 chr11 102701463 + Exonic hg19 CESC TCGA-VS-A9UO 79 376 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 24914 ChimerSeq STARFusion TCGA_RNA-Seq BTBD1-BBOX1 BTBD1 chr15 83710480 - BBOX1 chr11 27114715 + Exonic hg19 CESC TCGA-VS-A9UO 34 92 In-Frame Inter-chr q25.2 p14.2 Seq+ 24915 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125699 - CXCL16 chr17 4637313 - Exonic hg19 CESC TCGA-VS-A9UO 7 19 Out-of-frame Inter-chr q12.2 p13.2 24916 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125718 - CXCL16 chr17 4637332 - Exonic hg19 CESC TCGA-VS-A9UO 4 19 Out-of-frame Inter-chr q12.2 p13.2 24917 ChimerSeq STARFusion TCGA_RNA-Seq SRGAP3-ITPR1 SRGAP3 chr3 9032196 - ITPR1 chr3 4808214 + Exonic hg19 CESC TCGA-VS-A9UO 2 4 In-Frame Intra-chr p25.3 Tumor suppressor gene p26.1 Seq+ 24918 ChimerSeq STARFusion TCGA_RNA-Seq GABRP-KCNIP1 GABRP chr5 170232857 + KCNIP1 chr5 170145762 + Exonic hg19 CESC TCGA-FU-A40J-01A 5 41 In-Frame Intra-chr q35.1 q35.1 Seq+ 24919 ChimerSeq STARFusion TCGA_RNA-Seq AGSK1-LOC388152 AGSK1 chr15 82764745 - LOC388152 chr15 84868719 - Exonic hg19 CESC TCGA-FU-A40J-01A 3 9 Out-of-frame Intra-chr 24920 ChimerSeq STARFusion TCGA_RNA-Seq CLEC16A-RMI2 CLEC16A chr16 11220003 + RMI2 chr16 11444499 + Exonic hg19 CESC TCGA-FU-A40J-01A 2 1 In-Frame Intra-chr p13.13 p13.13 Seq+ 24921 ChimerSeq STARFusion TCGA_RNA-Seq CLASRP-LOC100996307 CLASRP chr19 45562622 + LOC100996307 chr19 43155239 + Exonic hg19 CESC TCGA-C5-A901-01A 36 128 Out-of-frame Intra-chr q13.32 24922 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 CESC TCGA-C5-A901-01A 2 7 3'UTR-5'UTR Intra-chr q34 24923 ChimerSeq STARFusion TCGA_RNA-Seq SHANK2-SPDL1 SHANK2 chr11 70935743 - SPDL1 chr5 169015398 + Exonic hg19 CESC TCGA-C5-A901-01A 2 1 Out-of-frame Inter-chr q13.4 q35.1 24924 ChimerSeq STARFusion TCGA_RNA-Seq CAPZA2-RARRES1 CAPZA2 chr7 116502704 + RARRES1 chr3 158415759 - Exonic hg19 CESC TCGA-FU-A23K-01A 2 1 In-Frame Inter-chr q31.2 q25.32 24925 ChimerSeq STARFusion TCGA_RNA-Seq GLTSCR2-DHX34 GLTSCR2 chr19 48249040 + DHX34 chr19 47885237 + Exonic hg19 CESC TCGA-FU-A23K-01A 2 0 Out-of-frame Intra-chr Tumor suppressor gene q13.32 24926 ChimerSeq STARFusion TCGA_RNA-Seq SASH1-PACRG SASH1 chr6 148711398 + PACRG chr6 163510291 + Exonic hg19 CESC TCGA-JW-AAVH-01A 5 7 Out-of-frame Intra-chr q24.3 Tumor suppressor gene q26 Tumor suppressor gene Seq+ 24927 ChimerSeq STARFusion TCGA_RNA-Seq PCBP2-AMHR2 PCBP2 chr12 53862616 + AMHR2 chr12 53823930 + Exonic hg19 CESC TCGA-C5-A1MQ 43 252 Out-of-frame Intra-chr q13.13 q13.13 Seq+ 24928 ChimerSeq STARFusion TCGA_RNA-Seq PCBP2-AMHR2 PCBP2 chr12 53862616 + AMHR2 chr12 53824961 + Exonic hg19 CESC TCGA-C5-A1MQ 13 252 In-Frame Intra-chr q13.13 q13.13 Seq+ 24929 ChimerSeq STARFusion TCGA_RNA-Seq UBA2-GPI UBA2 chr19 34919475 + GPI chr19 34869839 + Exonic hg19 CESC TCGA-C5-A1MQ 7 16 In-Frame Intra-chr q13.11 Seq+ 24930 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP35-SAE1 ARHGAP35 chr19 47425613 + SAE1 chr19 47673075 + Exonic hg19 CESC TCGA-Q1-A5R2-01A 2 19 In-Frame Intra-chr q13.32 Transcription factor q13.32 Seq+ 24931 ChimerSeq STARFusion TCGA_RNA-Seq MED23-ANO2 MED23 chr6 131908849 - ANO2 chr12 5841796 - Exonic hg19 CESC TCGA-Q1-A5R2-01A 3 14 In-Frame Inter-chr q23.2 p13.31 Seq+ 24932 ChimerSeq STARFusion TCGA_RNA-Seq UBE2R2-NME2 UBE2R2 chr9 33886965 + NME2 chr17 49247298 + Exonic hg19 CESC TCGA-Q1-A5R2-01A 2 1 In-Frame Inter-chr p13.3 q21.33 Transcription factor 24933 ChimerSeq STARFusion TCGA_RNA-Seq TUBB-MDC1 TUBB chr6 30688340 + MDC1 chr6 30685678 - Exonic hg19 CESC TCGA-VS-A9UY 28 78 CDS-5'UTR Intra-chr Tumor suppressor gene Seq+ 24934 ChimerSeq STARFusion TCGA_RNA-Seq JAG1-SLX4IP JAG1 chr20 10622108 - SLX4IP chr20 10582379 + Exonic hg19 CESC TCGA-MY-A5BE-01A 2 5 Out-of-frame Intra-chr p12.2 p12.2 Seq+ 24935 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K5-PEX7 MAP3K5 chr6 136977445 - PEX7 chr6 137219280 + Exonic hg19 CESC TCGA-C5-A7CH-01A 4 2 Out-of-frame Intra-chr q23.3 STE:STE11 q23.3 24936 ChimerSeq STARFusion TCGA_RNA-Seq RAB30-AQP11 RAB30 chr11 82782733 - AQP11 chr11 77314601 + Exonic hg19 CESC TCGA-VS-A8EH-01A 6 31 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 24937 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 CESC TCGA-VS-A8EH-01A 2 2 3'UTR-5'UTR Intra-chr q34 24938 ChimerSeq STARFusion TCGA_RNA-Seq LITAF-BCAR4 LITAF chr16 11680742 - BCAR4 chr16 11914154 - Exonic hg19 CESC TCGA-VS-A8QA-01A 21 16 5'UTR-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 24939 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-FLJ44635 TPT1 chr13 45911405 - FLJ44635 chrX 71380315 + Exonic hg19 CESC TCGA-VS-A8QA-01A 5 8 Out-of-frame Inter-chr q14.13 24940 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-FLJ44635 TPT1 chr13 45911393 - FLJ44635 chrX 71380327 + Exonic hg19 CESC TCGA-VS-A8QA-01A 3 8 Out-of-frame Inter-chr q14.13 24941 ChimerSeq STARFusion TCGA_RNA-Seq MRPS5-SQSTM1 MRPS5 chr2 95772168 - SQSTM1 chr5 179249958 + Exonic hg19 CESC TCGA-EA-A5FO 2 1 Out-of-frame Inter-chr q11.1 q35.3 24942 ChimerSeq STARFusion TCGA_RNA-Seq RHBDL2-AHCYL2 RHBDL2 chr1 39407354 - AHCYL2 chr7 129062681 + Exonic hg19 CESC TCGA-VS-A8QF-01A 6 42 5'UTR-CDS Inter-chr p34.3 q32.1 Seq+ 24943 ChimerSeq STARFusion TCGA_RNA-Seq THSD4-C15orf60 THSD4 chr15 71704162 + C15orf60 chr15 73843279 + Exonic hg19 CESC TCGA-VS-A8QF-01A 2 14 In-Frame Intra-chr q23 Seq+ 24944 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-FAM168A FCHSD2 chr11 72794740 - FAM168A chr11 73131044 - Exonic hg19 CESC TCGA-VS-A8QF-01A 2 4 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 24945 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-HM13 TPX2 chr20 30347982 + HM13 chr20 30142549 + Exonic hg19 CESC TCGA-DS-A0VK-01A 2 4 In-Frame Intra-chr q11.21 q11.21 Seq+ 24946 ChimerSeq STARFusion TCGA_RNA-Seq AHCTF1-SMYD3 AHCTF1 chr1 247053268 - SMYD3 chr1 246518396 - Exonic hg19 CESC TCGA-EK-A2PK-01A 2 1 In-Frame Intra-chr q44 Transcription factor q44 Transcription factor 24947 ChimerSeq STARFusion TCGA_RNA-Seq INTS6-BZW2 INTS6 chr13 52025161 - BZW2 chr7 16714037 + Exonic hg19 CESC TCGA-C5-A7CG-01A 6 15 Out-of-frame Inter-chr q14.3 Tumor suppressor gene p21.1 Seq+ 24948 ChimerSeq STARFusion TCGA_RNA-Seq RB1-ITM2B RB1 chr13 48955579 + ITM2B chr13 48827944 + Exonic hg19 CESC TCGA-C5-A7CG-01A 2 1 In-Frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Seq+ 24949 ChimerSeq STARFusion TCGA_RNA-Seq LCOR-TM9SF3 LCOR chr10 98711953 + TM9SF3 chr10 98325183 - Exonic hg19 CESC TCGA-VS-A8EG-01A 2 1 Out-of-frame Intra-chr q24.1 Transcription factor q24.1 24950 ChimerSeq STARFusion TCGA_RNA-Seq IL20RB-C3orf27 IL20RB chr3 136677043 + C3orf27 chr3 128294229 - Exonic hg19 CESC TCGA-VS-A8EG-01A 2 0 CDS-5'UTR Intra-chr q22.3 24951 ChimerSeq STARFusion TCGA_RNA-Seq TET2-CDK14 TET2 chr4 106068136 + CDK14 chr7 90355881 + Exonic hg19 CESC TCGA-VS-A8EG-01A 2 0 5'UTR-CDS Inter-chr q24 Oncogene Tumor suppressor gene Transcription factor q21.13 24952 ChimerSeq STARFusion TCGA_RNA-Seq LMO2-CD59 LMO2 chr11 33886148 - CD59 chr11 33744009 - Exonic hg19 CESC TCGA-EK-A2RA-01A 3 5 CDS-5'UTR Intra-chr p13 p13 Seq+ 24953 ChimerSeq STARFusion TCGA_RNA-Seq NXN-ABR NXN chr17 882559 - ABR chr17 916404 - Exonic hg19 CESC TCGA-MY-A913-01A 6 90 In-Frame Intra-chr p13.3 p13.3 Seq+ 24954 ChimerSeq STARFusion TCGA_RNA-Seq DCUN1D5-WTAPP1 DCUN1D5 chr11 102953985 - WTAPP1 chr11 102668755 + Exonic hg19 CESC TCGA-MY-A913-01A 6 47 Out-of-frame Intra-chr q22.3 q22.2 Seq+ 24955 ChimerSeq STARFusion TCGA_RNA-Seq DCUN1D5-WTAPP1 DCUN1D5 chr11 102953477 - WTAPP1 chr11 102668755 + Exonic hg19 CESC TCGA-MY-A913-01A 2 47 Out-of-frame Intra-chr q22.3 q22.2 Seq+ 24956 ChimerSeq STARFusion TCGA_RNA-Seq YAP1-DDX11L2 YAP1 chr11 102033302 + DDX11L2 chr2 114359006 - Exonic hg19 CESC TCGA-MY-A913-01A 3 15 CDS-3'UTR Inter-chr q22.1 Tumor suppressor gene q14.1 24957 ChimerSeq STARFusion TCGA_RNA-Seq YAP1-TMEM123 YAP1 chr11 102033302 + TMEM123 chr11 102272937 - Exonic hg19 CESC TCGA-MY-A913-01A 2 1 In-Frame Intra-chr q22.1 Tumor suppressor gene q22.2 24958 ChimerSeq STARFusion TCGA_RNA-Seq FBXW11-KCNIP1 FBXW11 chr5 171433462 - KCNIP1 chr5 170145762 + Exonic hg19 CESC TCGA-VS-A9UT 13 27 Out-of-frame Intra-chr q35.1 q35.1 Seq+ 24959 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R15A-EMP3 PPP1R15A chr19 49378155 + EMP3 chr19 48825071 + Exonic hg19 CESC TCGA-VS-A9UT 5 28 CDS-5'UTR Intra-chr q13.33 q13.33 Seq+ 24960 ChimerSeq STARFusion TCGA_RNA-Seq RFX3-DDAH2 RFX3 chr9 3525747 - DDAH2 chr6 31696522 - Exonic hg19 CESC TCGA-VS-A9UT 4 21 5'UTR-CDS Inter-chr p24.2 Transcription factor Seq+ 24961 ChimerSeq STARFusion TCGA_RNA-Seq SNTA1-PXMP4 SNTA1 chr20 32026647 - PXMP4 chr20 32302542 - Exonic hg19 CESC TCGA-VS-A9UT 2 3 Out-of-frame Intra-chr q11.21 q11.22 Seq+ 24962 ChimerSeq STARFusion TCGA_RNA-Seq MELK-MS4A12 MELK chr9 36607670 + MS4A12 chr11 60264786 + Exonic hg19 CESC TCGA-MU-A5YI-01A 23 54 5'UTR-5'UTR Inter-chr p13.2 CAMK:CAMKL q12.2 Seq+ 24963 ChimerSeq STARFusion TCGA_RNA-Seq SNHG16-PRCD SNHG16 chr17 74553939 + PRCD chr17 74536587 + Exonic hg19 CESC TCGA-EX-A3L1-01A 2 1 Out-of-frame Intra-chr q25.1 q25.1 24964 ChimerSeq STARFusion TCGA_RNA-Seq PLAUR-SMG9 PLAUR chr19 44171733 - SMG9 chr19 44254899 - Exonic hg19 CESC TCGA-VS-A8Q8-01A 10 30 CDS-5'UTR Intra-chr q13.31 q13.31 Seq+ 24965 ChimerSeq STARFusion TCGA_RNA-Seq HDGFRP2-CHAF1A HDGFRP2 chr19 4488873 + CHAF1A chr19 4442242 + Exonic hg19 CESC TCGA-HM-A6W2-06A 39 95 In-Frame Intra-chr p13.3 24966 ChimerSeq STARFusion TCGA_RNA-Seq FRYL-OCIAD2 FRYL chr4 48782095 - OCIAD2 chr4 48887582 - Exonic hg19 CESC TCGA-HM-A6W2-06A 23 157 5'UTR-CDS Intra-chr p11 p11 Seq+ 24967 ChimerSeq STARFusion TCGA_RNA-Seq PSMA7-TAF4 PSMA7 chr20 60718264 - TAF4 chr20 60551391 - Exonic hg19 CESC TCGA-HM-A6W2-06A 16 31 In-Frame Intra-chr q13.33 24968 ChimerSeq STARFusion TCGA_RNA-Seq SF3A2-DOT1L SF3A2 chr19 2236900 + DOT1L chr19 2226324 + Exonic hg19 CESC TCGA-HM-A6W2-06A 9 30 5'UTR-CDS Intra-chr p13.3 p13.3 Oncogene Transcription factor 24969 ChimerSeq STARFusion TCGA_RNA-Seq COG8-TERF2 COG8 chr16 69366617 - TERF2 chr16 69395392 - Exonic hg19 CESC TCGA-HM-A6W2-06A 7 36 Out-of-frame Intra-chr q22.1 q22.1 Transcription factor Seq+ 24970 ChimerSeq STARFusion TCGA_RNA-Seq SF3A2-DOT1L SF3A2 chr19 2238389 + DOT1L chr19 2226324 + Exonic hg19 CESC TCGA-HM-A6W2-06A 3 30 Out-of-frame Intra-chr p13.3 p13.3 Oncogene Transcription factor 24971 ChimerSeq STARFusion TCGA_RNA-Seq TMEM50A-RHD TMEM50A chr1 25669564 + RHD chr1 25655389 + Exonic hg19 CESC TCGA-HM-A6W2-06A 4 12 Out-of-frame Intra-chr p36.11 p36.11 24972 ChimerSeq STARFusion TCGA_RNA-Seq LARP4-SPRYD3 LARP4 chr12 50794811 + SPRYD3 chr12 53471045 - Exonic hg19 CESC TCGA-HM-A6W2-06A 5 7 Out-of-frame Intra-chr q13.12 q13.13 Seq+ 24973 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 CESC TCGA-HM-A6W2-06A 2 11 3'UTR-5'UTR Intra-chr q34 24974 ChimerSeq STARFusion TCGA_RNA-Seq ATP2A1-ATXN2L ATP2A1 chr16 28912237 + ATXN2L chr16 28846379 + Exonic hg19 CESC TCGA-HM-A6W2-06A 2 6 In-Frame Intra-chr p11.2 p11.2 Seq+ 24975 ChimerSeq STARFusion TCGA_RNA-Seq CHD6-CTNNBL1 CHD6 chr20 40141485 - CTNNBL1 chr20 36488301 + Exonic hg19 CESC TCGA-C5-A7CO-01A 2 24 In-Frame Intra-chr q12 q11.23 Seq+ 24976 ChimerSeq STARFusion TCGA_RNA-Seq AHCY-ACTR5 AHCY chr20 32868833 - ACTR5 chr20 37380774 + Exonic hg19 CESC TCGA-C5-A7CO-01A 3 4 3'UTR-CDS Intra-chr q11.22 q11.23 Seq+ 24977 ChimerSeq STARFusion TCGA_RNA-Seq F11R-USF1 F11R chr1 160990800 - USF1 chr1 161013150 - Exonic hg19 CESC TCGA-C5-A7CO-01A 2 8 CDS-5'UTR Intra-chr q23.3 q23.3 Transcription factor Seq+ 24978 ChimerSeq STARFusion TCGA_RNA-Seq FKBP6-LOC541473 FKBP6 chr7 72742279 + LOC541473 chr7 72440203 + Exonic hg19 CESC TCGA-C5-A7CO-01A 3 2 Out-of-frame Intra-chr q11.23 24979 ChimerSeq STARFusion TCGA_RNA-Seq CCBP2-KRBOX1 CCBP2 chr3 42861203 + KRBOX1 chr3 42980342 + Exonic hg19 CESC TCGA-EA-A43B-01A 2 3 5'UTR-5'UTR Intra-chr p22.1 Seq+ 24980 ChimerSeq STARFusion TCGA_RNA-Seq ANTXR2-GDEP ANTXR2 chr4 80952777 - GDEP chr4 80782444 + Exonic hg19 CESC TCGA-EA-A43B-01A 2 1 CDS-5'UTR Intra-chr q21.21 Seq+ 24981 ChimerSeq STARFusion TCGA_RNA-Seq ITGAL-KRT14 ITGAL chr16 30531249 + KRT14 chr17 39743147 - Exonic hg19 CESC TCGA-IR-A3LL-01A 5 1 CDS-5'UTR Inter-chr p11.2 q21.2 24982 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125699 - CXCL16 chr17 4637313 - Exonic hg19 CESC TCGA-UC-A7PI 4 8 Out-of-frame Inter-chr q12.2 p13.2 24983 ChimerSeq STARFusion TCGA_RNA-Seq TNFRSF1A-SCNN1A TNFRSF1A chr12 6442903 - SCNN1A chr12 6465046 - Exonic hg19 CESC TCGA-VS-A94W-01A 3 16 Out-of-frame Intra-chr p13.31 p13.31 Seq+ 24984 ChimerSeq STARFusion TCGA_RNA-Seq RFX3-NFIB RFX3 chr9 3346667 - NFIB chr9 14307519 - Exonic hg19 CESC TCGA-VS-A94W-01A 2 2 Out-of-frame Intra-chr p24.2 Transcription factor p22.3 Transcription factor 24985 ChimerSeq STARFusion TCGA_RNA-Seq TAF1D-RNPC3 TAF1D chr11 93470230 - RNPC3 chr1 104097656 + Exonic hg19 CESC TCGA-VS-A94W-01A 2 0 CDS-3'UTR Inter-chr q21 p21.1 24986 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-SEC61G EGFR chr7 55242513 + SEC61G chr7 54820113 - Exonic hg19 CESC TCGA-DS-A7WI-01A 17 32 Out-of-frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 24987 ChimerSeq STARFusion TCGA_RNA-Seq PILRB-PVRIG PILRB chr7 99943591 + PVRIG chr7 99816872 + Exonic hg19 CESC TCGA-DS-A7WI-01A 3 7 5'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 24988 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF1-SNRNP70 ARHGEF1 chr19 42399559 + SNRNP70 chr19 49604647 + Exonic hg19 CESC TCGA-UC-A7PG 12 49 Out-of-frame Intra-chr q13.2 q13.33 Seq+ 24989 ChimerSeq STARFusion TCGA_RNA-Seq SLC1A5-AP2A1 SLC1A5 chr19 47285640 - AP2A1 chr19 50285014 + Exonic hg19 CESC TCGA-UC-A7PG 4 25 Out-of-frame Intra-chr q13.32 q13.33 Seq+ 24990 ChimerSeq STARFusion TCGA_RNA-Seq TMEM87B-MERTK TMEM87B chr2 112813333 + MERTK chr2 112751828 + Exonic hg19 CESC TCGA-C5-A7X5-01A 62 157 In-Frame Intra-chr q13 q13 Seq+ 24991 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 58009083 + VMP1 chr17 57895073 + Exonic hg19 CESC TCGA-C5-A7X5-01A 7 51 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 24992 ChimerSeq STARFusion TCGA_RNA-Seq FDX1-KNCN FDX1 chr11 110306682 + KNCN chr1 47015674 - Exonic hg19 CESC TCGA-C5-A7X5-01A 7 32 Out-of-frame Inter-chr q22.3 p33 Seq+ 24993 ChimerSeq STARFusion TCGA_RNA-Seq MOB4-COQ10B MOB4 chr2 198405161 + COQ10B chr2 198334794 + Exonic hg19 CESC TCGA-C5-A7X5-01A 6 26 In-Frame Intra-chr q33.1 q33.1 Seq+ 24994 ChimerSeq STARFusion TCGA_RNA-Seq UBE2O-MXRA7 UBE2O chr17 74448807 - MXRA7 chr17 74684258 - Exonic hg19 CESC TCGA-C5-A7X5-01A 6 22 In-Frame Intra-chr q25.1 q25.1 Seq+ 24995 ChimerSeq STARFusion TCGA_RNA-Seq FAM49B-ASAP1 FAM49B chr8 130983189 - ASAP1 chr8 131165051 - Exonic hg19 CESC TCGA-C5-A7X5-01A 5 14 3'UTR-CDS Intra-chr q24.21 q24.22 Seq+ 24996 ChimerSeq STARFusion TCGA_RNA-Seq FAM49B-ASAP1 FAM49B chr8 130951854 - ASAP1 chr8 131165051 - Exonic hg19 CESC TCGA-C5-A7X5-01A 3 14 5'UTR-CDS Intra-chr q24.21 q24.22 Seq+ 24997 ChimerSeq STARFusion TCGA_RNA-Seq MADD-DDB2 MADD chr11 47317606 + DDB2 chr11 47254365 + Exonic hg19 CESC TCGA-C5-A7X5-01A 2 12 In-Frame Intra-chr p11.2 Tumor suppressor gene p11.2 Oncogene Tumor suppressor gene Seq+ 24998 ChimerSeq STARFusion TCGA_RNA-Seq ZNF148-OSBPL11 ZNF148 chr3 124996570 - OSBPL11 chr3 125257477 - Exonic hg19 CESC TCGA-C5-A7X5-01A 3 8 Out-of-frame Intra-chr q21.2 Transcription factor q21.2 Seq+ 24999 ChimerSeq STARFusion TCGA_RNA-Seq ZNF473-AP2A1 ZNF473 chr19 50534348 + AP2A1 chr19 50285014 + Exonic hg19 CESC TCGA-C5-A7X5-01A 2 10 Out-of-frame Intra-chr q13.33 Transcription factor q13.33 Seq+ 25000 ChimerSeq STARFusion TCGA_RNA-Seq MAFIP-SCGB1A1 MAFIP chr4_gl000194_random 112792 - SCGB1A1 chr11 62189693 + Exonic hg19 CESC TCGA-C5-A7X5-01A 2 3 Out-of-frame Inter-chr q12.3 25001 ChimerSeq STARFusion TCGA_RNA-Seq HADHA-INADL HADHA chr2 26424018 - INADL chr1 62365255 + Exonic hg19 CESC TCGA-C5-A7X5-01A 2 1 Out-of-frame Inter-chr p23.3 25002 ChimerSeq STARFusion TCGA_RNA-Seq HADHB-SULT1C3 HADHB chr2 26496618 + SULT1C3 chr2 108868821 + Exonic hg19 CESC TCGA-C5-A7X5-01A 2 1 Out-of-frame Intra-chr p23.3 q12.3 25003 ChimerSeq STARFusion TCGA_RNA-Seq ANXA2-NARG2 ANXA2 chr15 60674541 - NARG2 chr15 60715961 - Exonic hg19 CESC TCGA-C5-A7X5-01A 2 0 Out-of-frame Intra-chr q22.2 25004 ChimerSeq STARFusion TCGA_RNA-Seq UBE3C-C1D UBE3C chr7 156976723 + C1D chr2 68274451 - Exonic hg19 CESC TCGA-VS-A959 2 10 CDS-5'UTR Inter-chr q36.3 p14 Seq+ 25005 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-NEUROD2 ERBB2 chr17 37856564 + NEUROD2 chr17 37762857 - Exonic hg19 CESC TCGA-DS-A7WF-01A 55 244 CDS-5'UTR Intra-chr q12 Oncogene q12 Transcription factor Seq+ 25006 ChimerSeq STARFusion TCGA_RNA-Seq MICALL2-PSMG3 MICALL2 chr7 1498820 - PSMG3 chr7 1607486 - Exonic hg19 CESC TCGA-C5-A1BM-01A 27 118 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 25007 ChimerSeq STARFusion TCGA_RNA-Seq YWHAZ-HNRNPD YWHAZ chr8 101960824 - HNRNPD chr4 83275307 - Exonic hg19 CESC TCGA-C5-A1BM-01A 2 1 CDS-3'UTR Inter-chr q22.3 q21.22 25008 ChimerSeq STARFusion TCGA_RNA-Seq TNFRSF10D-LOC286059 TNFRSF10D chr8 22995155 - LOC286059 chr8 22939120 + Exonic hg19 CESC TCGA-EK-A2RL-01A 3 3 Out-of-frame Intra-chr p21.3 25009 ChimerSeq STARFusion TCGA_RNA-Seq C17orf62-HEXDC C17orf62 chr17 80403740 - HEXDC chr17 80391534 + Exonic hg19 CESC TCGA-DG-A2KM-01A 11 47 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 25010 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD27-TDRD12 ANKRD27 chr19 33106564 - TDRD12 chr19 33222631 + Exonic hg19 CESC TCGA-DG-A2KM-01A 9 28 In-Frame Intra-chr q13.11 q13.11 Seq+ 25011 ChimerSeq STARFusion TCGA_RNA-Seq TTLL1-PACSIN2 TTLL1 chr22 43442416 - PACSIN2 chr22 43308163 - Exonic hg19 CESC TCGA-DG-A2KM-01A 2 1 CDS-5'UTR Intra-chr q13.2 q13.2 25012 ChimerSeq STARFusion TCGA_RNA-Seq OTUD5-TEX101 OTUD5 chrX 48783123 - TEX101 chr19 43906918 + Exonic hg19 CESC TCGA-BI-A0VR-01A 2 1 CDS-5'UTR Inter-chr p11.23 q13.31 25013 ChimerSeq STARFusion TCGA_RNA-Seq LMAN2-NOP16 LMAN2 chr5 176778174 - NOP16 chr5 175813910 - Exonic hg19 CESC TCGA-C5-A7X3-01A 14 35 In-Frame Intra-chr q35.3 q35.2 Seq+ 25014 ChimerSeq STARFusion TCGA_RNA-Seq PRKD2-RCN3 PRKD2 chr19 47214900 - RCN3 chr19 50046448 + Exonic hg19 CESC TCGA-C5-A7X3-01A 10 45 Out-of-frame Intra-chr q13.32 q13.33 Seq+ 25015 ChimerSeq STARFusion TCGA_RNA-Seq KREMEN1-HSCB KREMEN1 chr22 29538088 + HSCB chr22 29147229 + Exonic hg19 CESC TCGA-C5-A7X3-01A 7 14 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 25016 ChimerSeq STARFusion TCGA_RNA-Seq ZNF384-CDCA3 ZNF384 chr12 6778197 - CDCA3 chr12 6958828 - Exonic hg19 CESC TCGA-C5-A7X3-01A 5 15 Out-of-frame Intra-chr p13.31 Oncogene Transcription factor p13.31 Seq+ 25017 ChimerSeq STARFusion TCGA_RNA-Seq MAP2K5-IQCH MAP2K5 chr15 67885312 + IQCH chr15 67782341 + Exonic hg19 CESC TCGA-C5-A7X3-01A 6 9 In-Frame Intra-chr q23 STE:STE7 q23 Seq+ 25018 ChimerSeq STARFusion TCGA_RNA-Seq WEE1-CHRNA3 WEE1 chr11 9608403 + CHRNA3 chr15 78894606 - Exonic hg19 CESC TCGA-C5-A7X3-01A 4 13 In-Frame Inter-chr p15.4 q25.1 Seq+ 25019 ChimerSeq STARFusion TCGA_RNA-Seq BLVRB-ZNF541 BLVRB chr19 40957271 - ZNF541 chr19 48024911 - Exonic hg19 CESC TCGA-C5-A7X3-01A 2 3 Out-of-frame Intra-chr q13.2 q13.33 Transcription factor 25020 ChimerSeq STARFusion TCGA_RNA-Seq INADL-DYNC2H1 INADL chr1 62483619 + DYNC2H1 chr11 103151077 + Exonic hg19 CESC TCGA-Q1-A6DT-01A 55 257 Out-of-frame Inter-chr q22.3 Seq+ 25021 ChimerSeq STARFusion TCGA_RNA-Seq SLC16A10-NME7 SLC16A10 chr6 111498868 + NME7 chr1 169102055 - Exonic hg19 CESC TCGA-Q1-A6DT-01A 24 151 In-Frame Inter-chr q21 q24.2 Seq+ 25022 ChimerSeq STARFusion TCGA_RNA-Seq UBE2V2-MCM4 UBE2V2 chr8 48921030 + MCM4 chr8 48879925 + Exonic hg19 CESC TCGA-Q1-A6DT-01A 13 3 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 25023 ChimerSeq STARFusion TCGA_RNA-Seq TMEM258-MYRF TMEM258 chr11 61557257 - MYRF chr11 61553272 + Exonic hg19 CESC TCGA-Q1-A6DT-01A 2 5 Out-of-frame Intra-chr q12.2 q12.2 Transcription factor 25024 ChimerSeq STARFusion TCGA_RNA-Seq ECT2-EGFEM1P ECT2 chr3 172474955 + EGFEM1P chr3 168031859 + Exonic hg19 CESC TCGA-EK-A2R9-01A 27 108 CDS-5'UTR Intra-chr q26.31 Tumor suppressor gene q26.2 Seq+ 25025 ChimerSeq STARFusion TCGA_RNA-Seq SEC62-RPL22L1 SEC62 chr3 169706147 + RPL22L1 chr3 170586179 - Exonic hg19 CESC TCGA-EK-A2R9-01A 22 50 Out-of-frame Intra-chr q26.2 q26.2 25026 ChimerSeq STARFusion TCGA_RNA-Seq SEC62-MECOM SEC62 chr3 169706147 + MECOM chr3 169099312 - Exonic hg19 CESC TCGA-EK-A2R9-01A 2 7 In-Frame Intra-chr q26.2 q26.2 Transcription factor 25027 ChimerSeq STARFusion TCGA_RNA-Seq TAOK3-SUDS3 TAOK3 chr12 118810453 - SUDS3 chr12 118823919 + Exonic hg19 CESC TCGA-DS-A0VM-01A 8 23 5'UTR-CDS Intra-chr q24.23 q24.23 Seq+ 25028 ChimerSeq STARFusion TCGA_RNA-Seq PMF1-RAB25 PMF1 chr1 156182967 + RAB25 chr1 156038061 + Exonic hg19 CESC TCGA-DS-A1OC-01A 21 188 In-Frame Intra-chr q22 q22 Tumor suppressor gene Seq+ 25029 ChimerSeq STARFusion TCGA_RNA-Seq NDRG1-ST3GAL1 NDRG1 chr8 134292478 - ST3GAL1 chr8 134475705 - Exonic hg19 CESC TCGA-DS-A1OC-01A 28 121 Out-of-frame Intra-chr q24.22 Tumor suppressor gene q24.22 Seq+ 25030 ChimerSeq STARFusion TCGA_RNA-Seq NDRG1-ST3GAL1 NDRG1 chr8 134292475 - ST3GAL1 chr8 134475702 - Exonic hg19 CESC TCGA-DS-A1OC-01A 20 121 Out-of-frame Intra-chr q24.22 Tumor suppressor gene q24.22 Seq+ 25031 ChimerSeq STARFusion TCGA_RNA-Seq CHAF1B-DOPEY2 CHAF1B chr21 37763966 + DOPEY2 chr21 37665618 + Exonic hg19 CESC TCGA-DS-A1OC-01A 17 132 Out-of-frame Intra-chr q22.12 q22.12 Seq+ 25032 ChimerSeq STARFusion TCGA_RNA-Seq MLL3-DNAH11 MLL3 chr7 152007051 - DNAH11 chr7 21856085 + Exonic hg19 CESC TCGA-DS-A1OC-01A 25 73 In-Frame Intra-chr Tumor suppressor gene p15.3 Seq+ 25033 ChimerSeq STARFusion TCGA_RNA-Seq HIF1A-FLJ22447 HIF1A chr14 62162557 + FLJ22447 chr14 62117680 + Exonic hg19 CESC TCGA-DS-A1OC-01A 17 62 CDS-5'UTR Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 25034 ChimerSeq STARFusion TCGA_RNA-Seq IPPK-BICD2 IPPK chr9 95418738 - BICD2 chr9 95491518 - Exonic hg19 CESC TCGA-DS-A1OC-01A 7 52 In-Frame Intra-chr q22.31 q22.31 Seq+ 25035 ChimerSeq STARFusion TCGA_RNA-Seq FBXL19-RNF40 FBXL19 chr16 30941905 + RNF40 chr16 30785259 + Exonic hg19 CESC TCGA-DS-A1OC-01A 11 25 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 25036 ChimerSeq STARFusion TCGA_RNA-Seq PCGF3-PDE6B PCGF3 chr4 699759 + PDE6B chr4 647641 + Exonic hg19 CESC TCGA-DS-A1OC-01A 6 20 5'UTR-5'UTR Intra-chr p16.3 p16.3 Seq+ 25037 ChimerSeq STARFusion TCGA_RNA-Seq SUB1-ECT2 SUB1 chr5 32585731 + ECT2 chr3 172479400 + Exonic hg19 CESC TCGA-DS-A1OC-01A 6 16 5'UTR-CDS Inter-chr p13.3 q26.31 Tumor suppressor gene Seq+ 25038 ChimerSeq STARFusion TCGA_RNA-Seq CAPN1-MRPL49 CAPN1 chr11 64956217 + MRPL49 chr11 64891974 + Exonic hg19 CESC TCGA-DS-A1OC-01A 4 23 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 25039 ChimerSeq STARFusion TCGA_RNA-Seq FRMD6-LINC00640 FRMD6 chr14 51956138 + LINC00640 chr14 51800111 + Exonic hg19 CESC TCGA-DS-A1OC-01A 5 17 Out-of-frame Intra-chr q22.1 q22.1 25040 ChimerSeq STARFusion TCGA_RNA-Seq TMEM184B-CSNK1E TMEM184B chr22 38668890 - CSNK1E chr22 38699253 - Exonic hg19 CESC TCGA-DS-A1OC-01A 6 3 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 25041 ChimerSeq STARFusion TCGA_RNA-Seq TMEM54-TRIM62 TMEM54 chr1 33363727 - TRIM62 chr1 33631167 - Exonic hg19 CESC TCGA-DS-A1OC-01A 3 14 In-Frame Intra-chr p35.1 p35.1 Tumor suppressor gene Seq+ 25042 ChimerSeq STARFusion TCGA_RNA-Seq TCEA3-ASAP3 TCEA3 chr1 23743742 - ASAP3 chr1 23782687 - Exonic hg19 CESC TCGA-DS-A1OC-01A 4 9 Out-of-frame Intra-chr Seq+ 25043 ChimerSeq STARFusion TCGA_RNA-Seq ATP11B-MAP3K13 ATP11B chr3 182545997 + MAP3K13 chr3 185146285 + Exonic hg19 CESC TCGA-DS-A1OC-01A 3 6 CDS-5'UTR Intra-chr q26.33 Oncogene q27.2 Seq+ 25044 ChimerSeq STARFusion TCGA_RNA-Seq TNFSF10-NCEH1 TNFSF10 chr3 172241043 - NCEH1 chr3 172353877 - Exonic hg19 CESC TCGA-DS-A1OC-01A 2 7 Out-of-frame Intra-chr q26.31 q26.31 Seq+ 25045 ChimerSeq STARFusion TCGA_RNA-Seq FAM129B-SHMT1 FAM129B chr9 130293927 - SHMT1 chr17 18259314 - Exonic hg19 CESC TCGA-DS-A1OC-01A 3 2 CDS-5'UTR Inter-chr q34.11 p11.2 Seq+ 25046 ChimerSeq STARFusion TCGA_RNA-Seq ILF3-AP1M2 ILF3 chr19 10782211 + AP1M2 chr19 10689639 - Exonic hg19 CESC TCGA-JW-A852-01A 2 5 In-Frame Intra-chr p13.2 p13.2 Seq+ 25047 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1737458 + Exonic hg19 CESC TCGA-WL-A834-01A 1049 2300 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 25048 ChimerSeq STARFusion TCGA_RNA-Seq PRRG4-EIF3M PRRG4 chr11 32861785 + EIF3M chr11 32622235 + Exonic hg19 CESC TCGA-WL-A834-01A 12 31 Out-of-frame Intra-chr p13 p13 25049 ChimerSeq STARFusion TCGA_RNA-Seq PRRG4-EIF3M PRRG4 chr11 32860476 + EIF3M chr11 32622235 + Exonic hg19 CESC TCGA-WL-A834-01A 7 31 In-Frame Intra-chr p13 p13 25050 ChimerSeq STARFusion TCGA_RNA-Seq ZZZ3-USP33 ZZZ3 chr1 78148272 - USP33 chr1 78167158 - Exonic hg19 CESC TCGA-WL-A834-01A 3 20 Out-of-frame Intra-chr p31.1 Transcription factor p31.1 Tumor suppressor gene Seq+ 25051 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 CESC TCGA-EA-A410-01A 3 0 In-Frame Intra-chr p11.21 p11.21 25052 ChimerSeq STARFusion TCGA_RNA-Seq VRK1-PAPOLA VRK1 chr14 97263784 + PAPOLA chr14 97022184 + Exonic hg19 CESC TCGA-VS-A8EC-01A 31 40 5'UTR-CDS Intra-chr q32.2 CK1:VRK q32.2 Seq+ 25053 ChimerSeq STARFusion TCGA_RNA-Seq SHISA5-IP6K2 SHISA5 chr3 48538570 - IP6K2 chr3 48732851 - Exonic hg19 CESC TCGA-VS-A8EC-01A 9 25 In-Frame Intra-chr p21.31 p21.31 Seq+ 25054 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1E-PLA2G6 CSNK1E chr22 38689261 - PLA2G6 chr22 38512218 - Exonic hg19 CESC TCGA-VS-A8EC-01A 9 24 3'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 25055 ChimerSeq STARFusion TCGA_RNA-Seq CYP20A1-CCDC178 CYP20A1 chr2 204116832 + CCDC178 chr18 30795659 - Exonic hg19 CESC TCGA-VS-A8EC-01A 7 16 Out-of-frame Inter-chr q33.2 q12.1 Seq+ 25056 ChimerSeq STARFusion TCGA_RNA-Seq CDC42EP2-MRPL49 CDC42EP2 chr11 65082425 + MRPL49 chr11 64892960 + Exonic hg19 CESC TCGA-VS-A8EC-01A 6 17 5'UTR-5'UTR Intra-chr q13.1 q13.1 Seq+ 25057 ChimerSeq STARFusion TCGA_RNA-Seq SHISA5-IP6K2 SHISA5 chr3 48538570 - IP6K2 chr3 48732854 - Exonic hg19 CESC TCGA-VS-A8EC-01A 2 25 In-Frame Intra-chr p21.31 p21.31 Seq+ 25058 ChimerSeq STARFusion TCGA_RNA-Seq AP3M2-LOC100507412 AP3M2 chr8 42022674 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 CESC TCGA-VS-A8EC-01A 3 20 CDS-5'UTR Inter-chr p11.21 25059 ChimerSeq STARFusion TCGA_RNA-Seq CDC42EP2-MRPL49 CDC42EP2 chr11 65082425 + MRPL49 chr11 64891974 + Exonic hg19 CESC TCGA-VS-A8EC-01A 2 17 5'UTR-5'UTR Intra-chr q13.1 q13.1 Seq+ 25060 ChimerSeq STARFusion TCGA_RNA-Seq RFC1-EHBP1 RFC1 chr4 39343965 - EHBP1 chr2 63169853 + Exonic hg19 CESC TCGA-VS-A8EC-01A 2 6 Out-of-frame Inter-chr p14 p15 Seq+ 25061 ChimerSeq STARFusion TCGA_RNA-Seq BCL3-CEACAM16 BCL3 chr19 45259597 + CEACAM16 chr19 45204631 + Exonic hg19 CESC TCGA-VS-A8EC-01A 2 4 CDS-5'UTR Intra-chr q13.32 Oncogene q13.31 Seq+ 25062 ChimerSeq STARFusion TCGA_RNA-Seq ABCC1-NDE1 ABCC1 chr16 16110478 + NDE1 chr16 15758593 + Exonic hg19 CESC TCGA-VS-A8EC-01A 2 3 CDS-5'UTR Intra-chr p13.11 Seq+ 25063 ChimerSeq STARFusion TCGA_RNA-Seq TTC7B-CCDC88C TTC7B chr14 91247082 - CCDC88C chr14 91883182 - Exonic hg19 CESC TCGA-VS-A8EC-01A 2 3 Out-of-frame Intra-chr q32.11 q32.12 Seq+ 25064 ChimerSeq STARFusion TCGA_RNA-Seq PI4KB-SELENBP1 PI4KB chr1 151288049 - SELENBP1 chr1 151345174 - Exonic hg19 CESC TCGA-VS-A950 20 96 CDS-5'UTR Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 25065 ChimerSeq STARFusion TCGA_RNA-Seq PI4KB-SELENBP1 PI4KB chr1 151288049 - SELENBP1 chr1 151342245 - Exonic hg19 CESC TCGA-VS-A950 8 96 Out-of-frame Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 25066 ChimerSeq STARFusion TCGA_RNA-Seq GET4-HEATR2 GET4 chr7 927156 + HEATR2 chr7 794226 + Exonic hg19 CESC TCGA-JW-A5VJ-01A 16 104 In-Frame Intra-chr p22.3 Seq+ 25067 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-TXN2 MYH9 chr22 36744949 - TXN2 chr22 36863964 - Exonic hg19 CESC TCGA-JW-A5VJ-01A 13 41 In-Frame Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Seq+ 25068 ChimerSeq STARFusion TCGA_RNA-Seq UPK3BL-POLR2J4 UPK3BL chr7 102280741 - POLR2J4 chr7 44027394 - Exonic hg19 CESC TCGA-JW-A5VJ-01A 3 50 Out-of-frame Intra-chr p13 25069 ChimerSeq STARFusion TCGA_RNA-Seq LOC654433-IL36G LOC654433 chr2 114021031 + IL36G chr2 113736197 + Exonic hg19 CESC TCGA-JW-A5VJ-01A 8 24 5'UTR-5'UTR Intra-chr q14.1 25070 ChimerSeq STARFusion TCGA_RNA-Seq PDHX-STK32B PDHX chr11 34953031 + STK32B chr4 5418572 + Exonic hg19 CESC TCGA-JW-A5VJ-01A 6 20 In-Frame Inter-chr p13 p16.2 Seq+ 25071 ChimerSeq STARFusion TCGA_RNA-Seq ABCF3-YEATS2 ABCF3 chr3 183910684 + YEATS2 chr3 183493703 + Exonic hg19 CESC TCGA-JW-A5VJ-01A 8 4 In-Frame Intra-chr q27.1 q27.1 25072 ChimerSeq STARFusion TCGA_RNA-Seq CTNNBL1-MANBAL CTNNBL1 chr20 36396446 + MANBAL chr20 35944711 + Exonic hg19 CESC TCGA-JW-A5VJ-01A 3 17 In-Frame Intra-chr q11.23 q11.23 25073 ChimerSeq STARFusion TCGA_RNA-Seq PPP5C-HIF3A PPP5C chr19 46879831 + HIF3A chr19 46838162 + Exonic hg19 CESC TCGA-JW-A5VJ-01A 2 6 In-Frame Intra-chr q13.32 q13.32 Transcription factor Seq+ 25074 ChimerSeq STARFusion TCGA_RNA-Seq SFN-YWHAG SFN chr1 27190112 + YWHAG chr7 75959255 - Exonic hg19 CESC TCGA-C5-A3HL-01A 4 2 Out-of-frame Inter-chr p36.11 Tumor suppressor gene q11.23 25075 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-ANO1 PPFIA1 chr11 70118542 + ANO1 chr11 69962564 + Exonic hg19 CESC TCGA-IR-A3LA-01A 385 1099 In-Frame Intra-chr q13.3 q13.3 Seq+ 25076 ChimerSeq STARFusion TCGA_RNA-Seq POLDIP3-PACSIN2 POLDIP3 chr22 42984868 - PACSIN2 chr22 43289607 - Exonic hg19 CESC TCGA-IR-A3LA-01A 20 65 Out-of-frame Intra-chr q13.2 q13.2 25077 ChimerSeq STARFusion TCGA_RNA-Seq B2M-PATL2 B2M chr15 45003811 + PATL2 chr15 44968763 - Exonic hg19 CESC TCGA-IR-A3LA-01A 7 64 CDS-5'UTR Intra-chr Oncogene q21.1 Seq+ 25078 ChimerSeq STARFusion TCGA_RNA-Seq LRRFIP1-MLPH LRRFIP1 chr2 238536383 + MLPH chr2 238455249 + Exonic hg19 CESC TCGA-IR-A3LA-01A 2 4 In-Frame Intra-chr q37.3 q37.3 Seq+ 25079 ChimerSeq STARFusion TCGA_RNA-Seq RUNX1-RCAN1 RUNX1 chr21 36231771 - RCAN1 chr21 35896008 - Exonic hg19 CESC TCGA-C5-A7CJ-01A 3 6 Out-of-frame Intra-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q22.12 Seq+ 25080 ChimerSeq STARFusion TCGA_RNA-Seq HLCS-TSPEAR HLCS chr21 38269160 - TSPEAR chr21 45987889 - Exonic hg19 CESC TCGA-C5-A7CJ-01A 3 2 Out-of-frame Intra-chr q22.13 q22.3 Seq+ 25081 ChimerSeq STARFusion TCGA_RNA-Seq CASC5-LIPC CASC5 chr15 40886590 + LIPC chr15 58855704 + Exonic hg19 CESC TCGA-IR-A3LK-01A 18 547 5'UTR-CDS Intra-chr q15.1 Oncogene q21.3 Seq+ 25082 ChimerSeq STARFusion TCGA_RNA-Seq CASC5-LIPC CASC5 chr15 40886590 + LIPC chr15 58853077 + Exonic hg19 CESC TCGA-IR-A3LK-01A 15 547 5'UTR-CDS Intra-chr q15.1 Oncogene q21.3 Seq+ 25083 ChimerSeq STARFusion TCGA_RNA-Seq APIP-SLC1A2 APIP chr11 34909840 - SLC1A2 chr11 35287305 - Exonic hg19 CESC TCGA-IR-A3LK-01A 4 7 In-Frame Intra-chr p13 p13 KB Pub Seq+ 25084 ChimerSeq STARFusion TCGA_RNA-Seq CCBP2-KRBOX1 CCBP2 chr3 42861203 + KRBOX1 chr3 42980342 + Exonic hg19 CESC TCGA-IR-A3LK-01A 3 10 5'UTR-5'UTR Intra-chr p22.1 Seq+ 25085 ChimerSeq STARFusion TCGA_RNA-Seq BCAT2-TMEM143 BCAT2 chr19 49302932 - TMEM143 chr19 48846066 - Exonic hg19 CESC TCGA-IR-A3LK-01A 2 2 In-Frame Intra-chr q13.33 q13.33 Seq+ 25086 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-PHTF2 PTPN12 chr7 77200503 + PHTF2 chr7 77469538 + Exonic hg19 CESC TCGA-LP-A4AU-01A 2 3 5'UTR-5'UTR Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 25087 ChimerSeq STARFusion TCGA_RNA-Seq SAMD4B-SLFN5 SAMD4B chr19 39847729 + SLFN5 chr17 33591202 + Exonic hg19 CESC TCGA-EA-A3HR-01A 6 28 In-Frame Inter-chr q13.2 q12 Seq+ 25088 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 CESC TCGA-EA-A3HR-01A 2 4 3'UTR-5'UTR Intra-chr q34 25089 ChimerSeq STARFusion TCGA_RNA-Seq ALKBH5-LOC100507412 ALKBH5 chr17 18088327 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 CESC TCGA-DG-A2KJ-01A 8 54 CDS-5'UTR Inter-chr p11.2 25090 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86351941 + Exonic hg19 CESC TCGA-EK-A3GK-01A 2 3 Out-of-frame Intra-chr q21.2 q21.2 25091 ChimerSeq STARFusion TCGA_RNA-Seq KRT16-JUP KRT16 chr17 39768410 - JUP chr17 39915122 - Exonic hg19 CESC TCGA-DS-A5RQ-01A 148 893 In-Frame Intra-chr q21.2 q21.2 Tumor suppressor gene Seq+ 25092 ChimerSeq STARFusion TCGA_RNA-Seq KRT14-JUP KRT14 chr17 39742562 - JUP chr17 39915122 - Exonic hg19 CESC TCGA-DS-A5RQ-01A 5 25 In-Frame Intra-chr q21.2 q21.2 Tumor suppressor gene 25093 ChimerSeq STARFusion TCGA_RNA-Seq CBX5-NFE2 CBX5 chr12 54645825 - NFE2 chr12 54689088 - Exonic hg19 CESC TCGA-DS-A5RQ-01A 4 9 CDS-5'UTR Intra-chr q13.13 Tumor suppressor gene q13.13 Transcription factor Seq+ 25094 ChimerSeq STARFusion TCGA_RNA-Seq CDH8-RFX1 CDH8 chr16 61935083 - RFX1 chr19 14083939 - Exonic hg19 CESC TCGA-DS-A5RQ-01A 2 3 Out-of-frame Inter-chr q21 p13.12 Transcription factor Seq+ 25095 ChimerSeq STARFusion TCGA_RNA-Seq MFI2-DERL2 MFI2 chr3 196730772 - DERL2 chr17 5388536 - Exonic hg19 CESC TCGA-DS-A5RQ-01A 2 1 Out-of-frame Inter-chr p13.2 25096 ChimerSeq STARFusion TCGA_RNA-Seq LOC729852-MIOS LOC729852 chr7 7680452 + MIOS chr7 7645573 + Exonic hg19 CESC TCGA-HM-A6W2-01A 21 39 5'UTR-CDS Intra-chr p21.3 25097 ChimerSeq STARFusion TCGA_RNA-Seq ANO7-SEPT2 ANO7 chr2 242157796 + SEPT2 chr2 242263631 + Exonic hg19 CESC TCGA-HM-A6W2-01A 14 39 CDS-5'UTR Intra-chr q37.3 q37.3 Seq+ 25098 ChimerSeq STARFusion TCGA_RNA-Seq EEF1G-TUT1 EEF1G chr11 62334278 - TUT1 chr11 62349173 - Exonic hg19 CESC TCGA-HM-A6W2-01A 14 15 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 25099 ChimerSeq STARFusion TCGA_RNA-Seq ANO7-SEPT2 ANO7 chr2 242157796 + SEPT2 chr2 242274541 + Exonic hg19 CESC TCGA-HM-A6W2-01A 2 39 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 25100 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH3-BRD4 NOTCH3 chr19 15308311 - BRD4 chr19 15355573 - Exonic hg19 CESC TCGA-HM-A6W2-01A 2 24 Out-of-frame Intra-chr p13.12 Oncogene Tumor suppressor gene p13.12 Atypical:BRD Seq+ 25101 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH3-BRD4 NOTCH3 chr19 15308311 - BRD4 chr19 15360101 - Exonic hg19 CESC TCGA-HM-A6W2-01A 2 24 Out-of-frame Intra-chr p13.12 Oncogene Tumor suppressor gene p13.12 Atypical:BRD Seq+ 25102 ChimerSeq STARFusion TCGA_RNA-Seq NUDT14-BRF1 NUDT14 chr14 105647466 - BRF1 chr14 105676925 - Exonic hg19 CESC TCGA-HM-A6W2-01A 3 17 Out-of-frame Intra-chr q32.33 q32.33 Tumor suppressor gene Seq+ 25103 ChimerSeq STARFusion TCGA_RNA-Seq MTSS1L-VAC14 MTSS1L chr16 70698098 - VAC14 chr16 70721361 - Exonic hg19 CESC TCGA-HM-A6W2-01A 6 3 Out-of-frame Intra-chr q22.1 q22.2 Seq+ 25104 ChimerSeq STARFusion TCGA_RNA-Seq STAG1-MSL2 STAG1 chr3 136471037 - MSL2 chr3 135871580 - Exonic hg19 CESC TCGA-HM-A6W2-01A 4 9 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 25105 ChimerSeq STARFusion TCGA_RNA-Seq PSMD5-CDK5RAP2 PSMD5 chr9 123605015 - CDK5RAP2 chr9 123152065 - Exonic hg19 CESC TCGA-HM-A6W2-01A 3 10 Out-of-frame Intra-chr q33.2 q33.2 Seq+ 25106 ChimerSeq STARFusion TCGA_RNA-Seq ALKBH5-GID4 ALKBH5 chr17 18088327 + GID4 chr17 17962182 + Exonic hg19 CESC TCGA-HM-A6W2-01A 4 5 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 25107 ChimerSeq STARFusion TCGA_RNA-Seq GON4L-ARHGEF2 GON4L chr1 155746186 - ARHGEF2 chr1 155939091 - Exonic hg19 CESC TCGA-HM-A6W2-01A 4 5 In-Frame Intra-chr q22 q22 Seq+ 25108 ChimerSeq STARFusion TCGA_RNA-Seq DCHS2-PLRG1 DCHS2 chr4 155410456 - PLRG1 chr4 155461205 - Exonic hg19 CESC TCGA-HM-A6W2-01A 2 5 In-Frame Intra-chr q31.3 25109 ChimerSeq STARFusion TCGA_RNA-Seq DANCR-UBE2D2 DANCR chr4 53579126 + UBE2D2 chr5 138979957 + Exonic hg19 CESC TCGA-HM-A6W2-01A 2 2 5'UTR-5'UTR Inter-chr q12 q31.2 25110 ChimerSeq STARFusion TCGA_RNA-Seq TTC28-PITPNB TTC28 chr22 28385866 - PITPNB chr22 28269803 - Exonic hg19 CESC TCGA-HM-A6W2-01A 2 1 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 25111 ChimerSeq STARFusion TCGA_RNA-Seq ZNF667-ZSCAN5B ZNF667 chr19 56983068 - ZSCAN5B chr19 56703422 - Exonic hg19 CESC TCGA-C5-A1M5-01A 3 8 3'UTR-CDS Intra-chr q13.43 Transcription factor q13.43 Transcription factor Seq+ 25112 ChimerSeq STARFusion TCGA_RNA-Seq COL22A1-ZFAT COL22A1 chr8 139603667 - ZFAT chr8 135649955 - Exonic hg19 CESC TCGA-C5-A1M5-01A 2 6 In-Frame Intra-chr q24.3 q24.22 Transcription factor Seq+ 25113 ChimerSeq STARFusion TCGA_RNA-Seq SMC4-C9orf3 SMC4 chr3 160122292 + C9orf3 chr9 97848964 + Exonic hg19 CESC TCGA-C5-A1M5-01A 2 1 CDS-3'UTR Inter-chr q25.33 q22.32 25114 ChimerSeq STARFusion TCGA_RNA-Seq ANXA8L2-LINC00842 ANXA8L2 chr10 47747132 + LINC00842 chr10 47099714 - Exonic hg19 CESC TCGA-GH-A9DA-01A 2 4 Out-of-frame Intra-chr 25115 ChimerSeq STARFusion TCGA_RNA-Seq HSD17B12-CD82 HSD17B12 chr11 43772507 + CD82 chr11 44636822 + Exonic hg19 CESC TCGA-DR-A0ZL-01A 2 2 In-Frame Intra-chr p11.2 p11.2 Tumor suppressor gene 25116 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80976713 - MRPS28 chr8 80831383 - Exonic hg19 CESC TCGA-R2-A69V-01A 18 123 Out-of-frame Intra-chr q21.13 q21.13 25117 ChimerSeq STARFusion TCGA_RNA-Seq TNFAIP8-HSD17B4 TNFAIP8 chr5 118604602 + HSD17B4 chr5 118809603 + Exonic hg19 CESC TCGA-R2-A69V-01A 2 3 In-Frame Intra-chr q23.1 q23.1 25118 ChimerSeq STARFusion TCGA_RNA-Seq ZNF709-MAN2B1 ZNF709 chr19 12595469 - MAN2B1 chr19 12758412 - Exonic hg19 CESC TCGA-IR-A3LI-01A 22 274 In-Frame Intra-chr p13.2 Transcription factor p13.13 Seq+ 25119 ChimerSeq STARFusion TCGA_RNA-Seq ZNF709-MAN2B1 ZNF709 chr19 12595469 - MAN2B1 chr19 12758149 - Exonic hg19 CESC TCGA-IR-A3LI-01A 3 274 In-Frame Intra-chr p13.2 Transcription factor p13.13 Seq+ 25120 ChimerSeq STARFusion TCGA_RNA-Seq TRPV4-GIT2 TRPV4 chr12 110230168 - GIT2 chr12 110391039 - Exonic hg19 CESC TCGA-IR-A3LI-01A 6 19 In-Frame Intra-chr q24.11 q24.11 Seq+ 25121 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890980 - BCAR4 chr16 11914154 - Exonic hg19 CESC TCGA-IR-A3LI-01A 4 13 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 25122 ChimerSeq STARFusion TCGA_RNA-Seq UBE3A-DTWD1 UBE3A chr15 25620612 - DTWD1 chr15 49917310 + Exonic hg19 CESC TCGA-IR-A3LB-01A 11 13 CDS-5'UTR Intra-chr q11.2 q21.2 Seq+ 25123 ChimerSeq STARFusion TCGA_RNA-Seq PAPSS2-LIPJ PAPSS2 chr10 89419765 + LIPJ chr10 90347023 + Exonic hg19 CESC TCGA-IR-A3LB-01A 4 7 CDS-5'UTR Intra-chr q23.2 q23.31 Seq+ 25124 ChimerSeq STARFusion TCGA_RNA-Seq FDCSP-RGAG1 FDCSP chr4 71096968 + RGAG1 chrX 109688343 + Exonic hg19 CESC TCGA-FU-A3TX-01A 3 144 CDS-5'UTR Inter-chr q13.3 Seq+ 25125 ChimerSeq STARFusion TCGA_RNA-Seq FDCSP-RGAG1 FDCSP chr4 71096968 + RGAG1 chrX 109688381 + Exonic hg19 CESC TCGA-FU-A3TX-01A 3 144 CDS-5'UTR Inter-chr q13.3 Seq+ 25126 ChimerSeq STARFusion TCGA_RNA-Seq PPP4R1-PAWR PPP4R1 chr18 9570155 - PAWR chr12 80014987 - Exonic hg19 CESC TCGA-FU-A3TX-01A 4 49 Out-of-frame Inter-chr p11.22 q21.2 Tumor suppressor gene Seq+ 25127 ChimerSeq STARFusion TCGA_RNA-Seq MED24-MIEN1 MED24 chr17 38176178 - MIEN1 chr17 37886786 - Exonic hg19 CESC TCGA-MA-AA43 36 0 Out-of-frame Intra-chr q21.1 q12 Seq+ 25128 ChimerSeq STARFusion TCGA_RNA-Seq ADCY2-CASC3 ADCY2 chr5 7414883 + CASC3 chr17 38318006 + Exonic hg19 CESC TCGA-MA-AA43 2 7 In-Frame Inter-chr p15.31 q21.1 Seq+ 25129 ChimerSeq STARFusion TCGA_RNA-Seq STK3-LRRC69 STK3 chr8 99538970 - LRRC69 chr8 92231118 + Exonic hg19 CESC TCGA-MA-AA43 2 3 In-Frame Intra-chr q22.2 q21.3 Seq+ 25130 ChimerSeq STARFusion TCGA_RNA-Seq STK3-SLC26A7 STK3 chr8 99538970 - SLC26A7 chr8 92231118 + Exonic hg19 CESC TCGA-MA-AA43 2 2 CDS-5'UTR Intra-chr q22.2 q21.3 Seq+ 25131 ChimerSeq STARFusion TCGA_RNA-Seq IL6ST-ZNF706 IL6ST chr5 55290612 - ZNF706 chr8 102213971 - Exonic hg19 CHOL TCGA-ZU-A8S4-01A 3 8 5'UTR-5'UTR Inter-chr q11.2 Oncogene q22.3 Transcription factor Seq+ 25132 ChimerSeq STARFusion TCGA_RNA-Seq AJUBA-CEP192 AJUBA chr14 23445854 - CEP192 chr18 13087016 + Exonic hg19 CHOL TCGA-W6-AA0S-01A 12 35 In-Frame Inter-chr q11.2 p11.21 Seq+ 25133 ChimerSeq STARFusion TCGA_RNA-Seq NRAS-CLDN14 NRAS chr1 115258671 - CLDN14 chr21 37834074 - Exonic hg19 CHOL TCGA-W6-AA0S-01A 3 23 CDS-5'UTR Inter-chr p13.2 Oncogene q22.13 Seq+ 25134 ChimerSeq STARFusion TCGA_RNA-Seq SMAP1-LOC100507412 SMAP1 chr6 71377844 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 CHOL TCGA-W5-AA30-01A 6 12 CDS-5'UTR Inter-chr q13 25135 ChimerSeq STARFusion TCGA_RNA-Seq RASAL2-COPA RASAL2 chr1 178269253 + COPA chr1 160310084 - Exonic hg19 CHOL TCGA-4G-AAZO-01A 9 22 In-Frame Intra-chr q25.2 Tumor suppressor gene q23.2 Seq+ 25136 ChimerSeq STARFusion TCGA_RNA-Seq NR3C2-SPATA17 NR3C2 chr4 149356256 - SPATA17 chr1 218036116 + Exonic hg19 CHOL TCGA-W5-AA2T-01A 4 17 Out-of-frame Inter-chr q31.23 Transcription factor q41 Seq+ 25137 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80954854 - MRPS28 chr8 80831382 - Exonic hg19 CHOL TCGA-W5-AA2T-01A 3 5 Out-of-frame Intra-chr q21.13 q21.13 25138 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-SMNDC1 PTPRK chr6 128561180 - SMNDC1 chr10 112058548 - Exonic hg19 CHOL TCGA-ZH-A8Y1-01A 43 205 In-Frame Inter-chr Tumor suppressor gene q25.2 Seq+ 25139 ChimerSeq STARFusion TCGA_RNA-Seq FGFR2-FRK FGFR2 chr10 123263304 - FRK chr6 116325161 - Exonic hg19 CHOL TCGA-ZH-A8Y1-01A 2 13 In-Frame Inter-chr q26.13 TK:FGFR Oncogene q22.1 TK:Src Tumor suppressor gene Seq+ 25140 ChimerSeq STARFusion TCGA_RNA-Seq FRK-BEND3 FRK chr6 116381131 - BEND3 chr6 107420500 - Exonic hg19 CHOL TCGA-ZH-A8Y1-01A 2 2 CDS-5'UTR Intra-chr q22.1 TK:Src Tumor suppressor gene q21 Seq+ 25141 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010683 - TTC18 chr10 75016175 - Exonic hg19 CHOL TCGA-W5-AA2H-01A 29 129 Out-of-frame Intra-chr q22.2 25142 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010573 - TTC18 chr10 75016174 - Exonic hg19 CHOL TCGA-W5-AA2H-01A 18 129 3'UTR-CDS Intra-chr q22.2 25143 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010596 - TTC18 chr10 75016174 - Exonic hg19 CHOL TCGA-W5-AA2H-01A 15 129 3'UTR-CDS Intra-chr q22.2 25144 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75011521 - TTC18 chr10 75016174 - Exonic hg19 CHOL TCGA-W5-AA2H-01A 4 129 Out-of-frame Intra-chr q22.2 25145 ChimerSeq STARFusion TCGA_RNA-Seq GLTSCR2-DHX34 GLTSCR2 chr19 48249040 + DHX34 chr19 47885237 + Exonic hg19 CHOL TCGA-W5-AA2H-01A 2 2 Out-of-frame Intra-chr Tumor suppressor gene q13.32 25146 ChimerSeq STARFusion TCGA_RNA-Seq FGFR2-C10orf118 FGFR2 chr10 123243212 - C10orf118 chr10 115910979 - Exonic hg19 CHOL TCGA-W5-AA2Z-01A 25 136 In-Frame Intra-chr q26.13 TK:FGFR Oncogene Seq+ 25147 ChimerSeq STARFusion TCGA_RNA-Seq VPS13D-VEGFC VPS13D chr1 12353761 + VEGFC chr4 177650900 - Exonic hg19 CHOL TCGA-W5-AA2Z-01A 4 11 In-Frame Inter-chr p36.22 q34.3 Seq+ 25148 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-NACC1 NIPBL chr5 36972143 + NACC1 chr19 13246014 + Exonic hg19 CHOL TCGA-ZH-A8Y6-01A 24 86 CDS-5'UTR Inter-chr p13.2 p13.13 Seq+ 25149 ChimerSeq STARFusion TCGA_RNA-Seq FTCD-GSTM2 FTCD chr21 47565331 - GSTM2 chr1 110213909 + Exonic hg19 CHOL TCGA-ZH-A8Y6-01A 2 1 In-Frame Inter-chr p13.3 25150 ChimerSeq STARFusion TCGA_RNA-Seq SPNS2-PSMD11 SPNS2 chr17 4428488 + PSMD11 chr17 30804539 + Exonic hg19 CHOL TCGA-W5-AA31-01A 22 81 In-Frame Intra-chr p13.2 q11.2 Seq+ 25151 ChimerSeq STARFusion TCGA_RNA-Seq PSMD11-CCL15 PSMD11 chr17 30781637 + CCL15 chr17 34325427 - Exonic hg19 CHOL TCGA-W5-AA31-01A 15 77 Out-of-frame Intra-chr q11.2 Seq+ 25152 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-NCOR1 TAOK1 chr17 27838010 + NCOR1 chr17 15984041 - Exonic hg19 CHOL TCGA-W5-AA31-01A 13 46 In-Frame Intra-chr q11.2 p11.2 Oncogene Seq+ 25153 ChimerSeq STARFusion TCGA_RNA-Seq NF1-MAP2K4 NF1 chr17 29509683 + MAP2K4 chr17 12028611 + Exonic hg19 CHOL TCGA-W5-AA31-01A 16 23 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene p12 STE:STE7 Oncogene Tumor suppressor gene Seq+ 25154 ChimerSeq STARFusion TCGA_RNA-Seq MYO18A-NF1 MYO18A chr17 27492960 - NF1 chr17 29483001 + Exonic hg19 CHOL TCGA-W5-AA31-01A 6 28 In-Frame Intra-chr q11.2 Oncogene q11.2 Oncogene Tumor suppressor gene Seq+ 25155 ChimerSeq STARFusion TCGA_RNA-Seq SLFN13-ARHGAP44 SLFN13 chr17 33775741 - ARHGAP44 chr17 12855818 + Exonic hg19 CHOL TCGA-W5-AA31-01A 9 4 5'UTR-CDS Intra-chr q12 p12 Seq+ 25156 ChimerSeq STARFusion TCGA_RNA-Seq RPA1-WDR81 RPA1 chr17 1756483 + WDR81 chr17 1633674 + Exonic hg19 CHOL TCGA-W5-AA31-01A 4 22 In-Frame Intra-chr p13.3 Tumor suppressor gene Seq+ 25157 ChimerSeq STARFusion TCGA_RNA-Seq INPP5K-RPA1 INPP5K chr17 1417166 - RPA1 chr17 1746097 + Exonic hg19 CHOL TCGA-W5-AA31-01A 3 23 Out-of-frame Intra-chr p13.3 p13.3 Tumor suppressor gene Seq+ 25158 ChimerSeq STARFusion TCGA_RNA-Seq CCL14-MYH10 CCL14 chr17 34313607 - MYH10 chr17 8526815 - Exonic hg19 CHOL TCGA-W5-AA31-01A 4 16 CDS-5'UTR Intra-chr q12 p13.1 Seq+ 25159 ChimerSeq STARFusion TCGA_RNA-Seq PITPNM3-P2RX5 PITPNM3 chr17 6371545 - P2RX5 chr17 3595088 - Exonic hg19 CHOL TCGA-W5-AA31-01A 2 24 Out-of-frame Intra-chr p13.1 p13.2 Seq+ 25160 ChimerSeq STARFusion TCGA_RNA-Seq ELAC2-RABEP1 ELAC2 chr17 12909238 - RABEP1 chr17 5211989 + Exonic hg19 CHOL TCGA-W5-AA31-01A 3 19 Out-of-frame Intra-chr p12 p13.2 Seq+ 25161 ChimerSeq STARFusion TCGA_RNA-Seq ELAC2-RABEP1 ELAC2 chr17 12913930 - RABEP1 chr17 5211989 + Exonic hg19 CHOL TCGA-W5-AA31-01A 3 19 Out-of-frame Intra-chr p12 p13.2 Seq+ 25162 ChimerSeq STARFusion TCGA_RNA-Seq NCOR1-HIC1 NCOR1 chr17 15973479 - HIC1 chr17 1959965 + Exonic hg19 CHOL TCGA-W5-AA31-01A 4 13 In-Frame Intra-chr p11.2 Oncogene p13.3 Tumor suppressor gene Transcription factor Seq+ 25163 ChimerSeq STARFusion TCGA_RNA-Seq CCL14-MYH10 CCL14 chr17 34313607 - MYH10 chr17 8526595 - Exonic hg19 CHOL TCGA-W5-AA31-01A 3 16 CDS-5'UTR Intra-chr q12 p13.1 Seq+ 25164 ChimerSeq STARFusion TCGA_RNA-Seq GLOD4-EIF5A GLOD4 chr17 673109 - EIF5A chr17 7212934 + Exonic hg19 CHOL TCGA-W5-AA31-01A 2 7 In-Frame Intra-chr p13.3 p13.1 Seq+ 25165 ChimerSeq STARFusion TCGA_RNA-Seq NTN1-DHRS7C NTN1 chr17 8926708 + DHRS7C chr17 9684911 - Exonic hg19 CHOL TCGA-W5-AA31-01A 2 0 In-Frame Intra-chr p13.1 p13.1 25166 ChimerSeq STARFusion TCGA_RNA-Seq FOXP1-SH3RF2 FOXP1 chr3 71090479 - SH3RF2 chr5 145379621 + Exonic hg19 CHOL TCGA-WD-A7RX-01A 4 5 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor q32 Seq+ 25167 ChimerSeq STARFusion TCGA_RNA-Seq FGFR2-BICC1 FGFR2 chr10 123243212 - BICC1 chr10 60461834 + Exonic hg19 CHOL TCGA-ZH-A8Y5-01A 96 248 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q21.1 Seq+ 25168 ChimerSeq STARFusion TCGA_RNA-Seq FMO5-AGPAT6 FMO5 chr1 146696487 - AGPAT6 chr8 41455811 + Exonic hg19 CHOL TCGA-ZH-A8Y5-01A 2 3 CDS-5'UTR Inter-chr q21.1 25169 ChimerSeq STARFusion TCGA_RNA-Seq CASC3-THRA CASC3 chr17 38324670 + THRA chr17 38249273 + Exonic hg19 CHOL TCGA-ZH-A8Y4-01A 6 42 In-Frame Intra-chr q21.1 q21.1 Tumor suppressor gene Transcription factor Seq+ 25170 ChimerSeq STARFusion TCGA_RNA-Seq CASC3-THRA CASC3 chr17 38324670 + THRA chr17 38249390 + Exonic hg19 CHOL TCGA-ZH-A8Y4-01A 2 42 In-Frame Intra-chr q21.1 q21.1 Tumor suppressor gene Transcription factor Seq+ 25171 ChimerSeq STARFusion TCGA_RNA-Seq NCK1-IL20RB NCK1 chr3 136581161 + IL20RB chr3 136699308 + Exonic hg19 CHOL TCGA-ZH-A8Y4-01A 8 13 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 25172 ChimerSeq STARFusion TCGA_RNA-Seq SHROOM4-AR SHROOM4 chrX 50438786 - AR chrX 66905852 + Exonic hg19 CHOL TCGA-ZH-A8Y4-01A 2 4 Out-of-frame Intra-chr p11.22 q12 Oncogene Tumor suppressor gene Transcription factor Seq+ 25173 ChimerSeq STARFusion TCGA_RNA-Seq ANAPC1P1-C2orf76 ANAPC1P1 chr2 87101178 + C2orf76 chr2 120097937 - Exonic hg19 CHOL TCGA-ZH-A8Y2-01A 10 47 Out-of-frame Intra-chr p11.2 q14.2 Seq+ 25174 ChimerSeq STARFusion TCGA_RNA-Seq ANAPC1P1-C2orf76 ANAPC1P1 chr2 87101178 + C2orf76 chr2 120097547 - Exonic hg19 CHOL TCGA-ZH-A8Y2-01A 8 47 Out-of-frame Intra-chr p11.2 q14.2 Seq+ 25175 ChimerSeq STARFusion TCGA_RNA-Seq ANAPC1P1-C2orf76 ANAPC1P1 chr2 87100471 + C2orf76 chr2 120097547 - Exonic hg19 CHOL TCGA-ZH-A8Y2-01A 2 47 Out-of-frame Intra-chr p11.2 q14.2 Seq+ 25176 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 CHOL TCGA-ZH-A8Y2-01A 2 3 CDS-5'UTR Intra-chr p12 p12 Transcription factor 25177 ChimerSeq STARFusion TCGA_RNA-Seq FGFR2-BICC1 FGFR2 chr10 123243212 - BICC1 chr10 60566344 + Exonic hg19 CHOL TCGA-W5-AA2W-01A 249 602 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q21.1 Seq+ 25178 ChimerSeq STARFusion TCGA_RNA-Seq BICC1-FGFR2 BICC1 chr10 60563002 + FGFR2 chr10 123239535 - Exonic hg19 CHOL TCGA-W5-AA2W-01A 20 62 In-Frame Intra-chr q21.1 q26.13 TK:FGFR Oncogene Seq+ 25179 ChimerSeq STARFusion TCGA_RNA-Seq CACYBP-RABGAP1L CACYBP chr1 174969331 + RABGAP1L chr1 174926594 + Exonic hg19 CHOL TCGA-W5-AA2W-01A 2 31 In-Frame Intra-chr q25.1 q25.1 Seq+ 25180 ChimerSeq STARFusion TCGA_RNA-Seq FGFR2-KIAA1598 FGFR2 chr10 123243212 - KIAA1598 chr10 118708508 - Exonic hg19 CHOL TCGA-W5-AA2Q-01A 84 997 In-Frame Intra-chr q26.13 TK:FGFR Oncogene Seq+ 25181 ChimerSeq STARFusion TCGA_RNA-Seq UBAP2L-DDX11L2 UBAP2L chr1 154228231 + DDX11L2 chr2 114359006 - Exonic hg19 CHOL TCGA-W5-AA2Q-01A 4 11 CDS-3'UTR Inter-chr q21.3 q14.1 25182 ChimerSeq STARFusion TCGA_RNA-Seq SLC29A2-RAB6A SLC29A2 chr11 66133407 - RAB6A chr11 73390765 - Exonic hg19 CHOL TCGA-W5-AA2X-01A 19 107 In-Frame Intra-chr q13.2 q13.4 Seq+ 25183 ChimerSeq STARFusion TCGA_RNA-Seq SLC29A2-RAB6A SLC29A2 chr11 66133407 - RAB6A chr11 73390972 - Exonic hg19 CHOL TCGA-W5-AA2X-01A 18 107 Out-of-frame Intra-chr q13.2 q13.4 Seq+ 25184 ChimerSeq STARFusion TCGA_RNA-Seq SHANK2-SPCS2 SHANK2 chr11 70505933 - SPCS2 chr11 74687902 + Exonic hg19 CHOL TCGA-W5-AA2X-01A 34 4 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 25185 ChimerSeq STARFusion TCGA_RNA-Seq SLC29A2-RAB6A SLC29A2 chr11 66131696 - RAB6A chr11 73390972 - Exonic hg19 CHOL TCGA-W5-AA2X-01A 3 107 Out-of-frame Intra-chr q13.2 q13.4 Seq+ 25186 ChimerSeq STARFusion TCGA_RNA-Seq SRGAP1-LOC100506844 SRGAP1 chr12 64238663 + LOC100506844 chr12 58329336 - Exonic hg19 CHOL TCGA-W5-AA2X-01A 11 48 CDS-3'UTR Intra-chr q14.2 25187 ChimerSeq STARFusion TCGA_RNA-Seq ZNF780A-NADSYN1 ZNF780A chr19 40596813 - NADSYN1 chr11 71201891 + Exonic hg19 CHOL TCGA-W5-AA2X-01A 6 30 5'UTR-CDS Inter-chr Transcription factor q13.4 Seq+ 25188 ChimerSeq STARFusion TCGA_RNA-Seq ZNF780A-NADSYN1 ZNF780A chr19 40596073 - NADSYN1 chr11 71201891 + Exonic hg19 CHOL TCGA-W5-AA2X-01A 6 30 5'UTR-CDS Inter-chr Transcription factor q13.4 Seq+ 25189 ChimerSeq STARFusion TCGA_RNA-Seq LOC100288778-WASH3P LOC100288778 chr12 89018 + WASH3P chr15 102515210 + Exonic hg19 CHOL TCGA-W5-AA2X-01A 7 24 5'UTR-5'UTR Inter-chr q26.3 25190 ChimerSeq STARFusion TCGA_RNA-Seq SRGAP1-TBC1D30 SRGAP1 chr12 64410792 + TBC1D30 chr12 65258448 + Exonic hg19 CHOL TCGA-W5-AA2X-01A 6 12 In-Frame Intra-chr q14.2 q14.3 Seq+ 25191 ChimerSeq STARFusion TCGA_RNA-Seq RAB3IP-BEST3 RAB3IP chr12 70178595 + BEST3 chr12 70072673 - Exonic hg19 CHOL TCGA-W5-AA2X-01A 3 20 Out-of-frame Intra-chr q15 q15 Seq+ 25192 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-RBM14 KDM2A chr11 66888829 + RBM14 chr11 66391685 + Exonic hg19 CHOL TCGA-W5-AA2X-01A 6 5 Out-of-frame Intra-chr q13.2 Transcription factor q13.2 Tumor suppressor gene Seq+ 25193 ChimerSeq STARFusion TCGA_RNA-Seq AGSK1-LOC388152 AGSK1 chr15 82764746 - LOC388152 chr15 84868720 - Exonic hg19 CHOL TCGA-W5-AA2X-01A 3 4 Out-of-frame Intra-chr 25194 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-SHANK2 UVRAG chr11 75623083 + SHANK2 chr11 70653276 - Exonic hg19 CHOL TCGA-W5-AA2X-01A 2 8 In-Frame Intra-chr q13.5 Tumor suppressor gene q13.4 Seq+ 25195 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-SHANK2 UVRAG chr11 75623083 + SHANK2 chr11 70666787 - Exonic hg19 CHOL TCGA-W5-AA2X-01A 2 8 Out-of-frame Intra-chr q13.5 Tumor suppressor gene q13.4 Seq+ 25196 ChimerSeq STARFusion TCGA_RNA-Seq SHANK2-NEU3 SHANK2 chr11 70505933 - NEU3 chr11 74705554 + Exonic hg19 CHOL TCGA-W5-AA2X-01A 2 6 In-Frame Intra-chr q13.4 q13.4 Seq+ 25197 ChimerSeq STARFusion TCGA_RNA-Seq SRGAP1-OS9 SRGAP1 chr12 64238663 + OS9 chr12 58109543 + Exonic hg19 CHOL TCGA-W5-AA2X-01A 2 4 Out-of-frame Intra-chr q14.2 q13.3 Seq+ 25198 ChimerSeq STARFusion TCGA_RNA-Seq CCNC-FAM201A CCNC chr6 100016372 - FAM201A chr9 38621829 + Exonic hg19 CHOL TCGA-YR-A95A-01A 6 14 CDS-5'UTR Inter-chr q16.2 Tumor suppressor gene p13.1 Seq+ 25199 ChimerSeq STARFusion TCGA_RNA-Seq SYT7-FADS3 SYT7 chr11 61318856 - FADS3 chr11 61646319 - Exonic hg19 CHOL TCGA-YR-A95A-01A 6 12 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 25200 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP35-SLC1A5 ARHGAP35 chr19 47492932 + SLC1A5 chr19 47282165 - Exonic hg19 CHOL TCGA-YR-A95A-01A 5 9 Out-of-frame Intra-chr q13.32 Transcription factor q13.32 Seq+ 25201 ChimerSeq STARFusion TCGA_RNA-Seq ACSS1-CDH4 ACSS1 chr20 25028721 - CDH4 chr20 60318619 + Exonic hg19 CHOL TCGA-3X-AAVE-01A 2 3 Out-of-frame Intra-chr p11.21 q13.33 Tumor suppressor gene Seq+ 25202 ChimerSeq STARFusion TCGA_RNA-Seq KDM4A-OPRD1 KDM4A chr1 44121437 + OPRD1 chr1 29185466 + Exonic hg19 CHOL TCGA-W5-AA36-01A 3 0 In-Frame Intra-chr p34.2 p35.3 Seq+ 25203 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80963762 - MRPS28 chr8 80831383 - Exonic hg19 CHOL TCGA-W5-AA34-01A 2 1 In-Frame Intra-chr q21.13 q21.13 25204 ChimerSeq STARFusion TCGA_RNA-Seq MUM1-EFNA2 MUM1 chr19 1367219 + EFNA2 chr19 1299823 + Exonic hg19 CHOL TCGA-3X-AAVA-01A 3 5 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p13.3 Seq+ 25205 ChimerSeq STARFusion TCGA_RNA-Seq PAFAH1B2-MRPL2 PAFAH1B2 chr11 117015134 + MRPL2 chr6 43025971 - Exonic hg19 CHOL TCGA-3X-AAVC-01A 9 22 5'UTR-CDS Inter-chr q23.3 p21.1 Seq+ 25206 ChimerSeq STARFusion TCGA_RNA-Seq IL1RAP-SIRPG IL1RAP chr3 190347287 + SIRPG chr20 1630054 - Exonic hg19 CHOL TCGA-W5-AA39-01A 3 10 In-Frame Inter-chr q28 p13 Seq+ 25207 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-LOC100507412 SEPT9 chr17 75303279 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 CHOL TCGA-W5-AA39-01A 2 1 5'UTR-5'UTR Inter-chr 25208 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-NCF4 TNRC6B chr22 40574144 + NCF4 chr22 37260087 + Exonic hg19 CHOL TCGA-W5-AA2I-01A 2 1 In-Frame Intra-chr q13.1 25209 ChimerSeq STARFusion TCGA_RNA-Seq NCOA4-RSU1 NCOA4 chr10 51565296 + RSU1 chr10 16635495 - Exonic hg19 CHOL TCGA-W5-AA2U-01A 13 56 5'UTR-CDS Intra-chr q11.22 Oncogene Tumor suppressor gene p13 Seq+ 25210 ChimerSeq STARFusion TCGA_RNA-Seq NCOA4-RSU1 NCOA4 chr10 51572492 + RSU1 chr10 16635495 - Exonic hg19 CHOL TCGA-W5-AA2U-01A 2 56 5'UTR-CDS Intra-chr q11.22 Oncogene Tumor suppressor gene p13 Seq+ 25211 ChimerSeq STARFusion TCGA_RNA-Seq RSU1-LARP4B RSU1 chr10 16858972 - LARP4B chr10 863829 - Exonic hg19 CHOL TCGA-W5-AA2U-01A 7 8 Out-of-frame Intra-chr p13 p15.3 Seq+ 25212 ChimerSeq STARFusion TCGA_RNA-Seq PHF20-CEP250 PHF20 chr20 34360001 + CEP250 chr20 34096772 + Exonic hg19 CHOL TCGA-W5-AA2U-01A 8 2 5'UTR-CDS Intra-chr q11.22 Transcription factor q11.22 Seq+ 25213 ChimerSeq STARFusion TCGA_RNA-Seq OLA1-CAB39 OLA1 chr2 174987908 - CAB39 chr2 231663444 + Exonic hg19 CHOL TCGA-W5-AA2U-01A 4 17 In-Frame Intra-chr q31.1 q37.1 Seq+ 25214 ChimerSeq STARFusion TCGA_RNA-Seq HOXC4-KBTBD12 HOXC4 chr12 54411198 + KBTBD12 chr3 127682032 + Exonic hg19 CHOL TCGA-W5-AA2U-01A 4 7 5'UTR-CDS Inter-chr q13.13 Transcription factor q21.3 Seq+ 25215 ChimerSeq STARFusion TCGA_RNA-Seq HOXC5-KBTBD12 HOXC5 chr12 54411198 + KBTBD12 chr3 127682032 + Exonic hg19 CHOL TCGA-W5-AA2U-01A 4 7 5'UTR-CDS Inter-chr q13.13 Transcription factor q21.3 25216 ChimerSeq STARFusion TCGA_RNA-Seq HOXC6-KBTBD12 HOXC6 chr12 54411198 + KBTBD12 chr3 127682032 + Exonic hg19 CHOL TCGA-W5-AA2U-01A 4 7 5'UTR-CDS Inter-chr q13.13 Transcription factor q21.3 Seq+ 25217 ChimerSeq STARFusion TCGA_RNA-Seq FXYD3-PEPD FXYD3 chr19 35607263 + PEPD chr19 33904549 - Exonic hg19 COAD TCGA-AA-3552-01A 9 0 5'UTR-CDS Intra-chr q13.12 q13.11 25218 ChimerSeq STARFusion TCGA_RNA-Seq GUCA2A-RPL18 GUCA2A chr1 42630362 - RPL18 chr19 49119203 - Exonic hg19 COAD TCGA-AA-3552-01A 3 0 Out-of-frame Inter-chr p34.2 q13.33 25219 ChimerSeq STARFusion TCGA_RNA-Seq NAIP-IFI27 NAIP chr5 70281590 - IFI27 chr14 94582131 + Exonic hg19 COAD TCGA-AZ-4681-01A 23 0 Out-of-frame Inter-chr q13.2 q32.12 25220 ChimerSeq STARFusion TCGA_RNA-Seq ACTG1-HCG18 ACTG1 chr17 79478380 - HCG18 chr6 30256988 - Exonic hg19 COAD TCGA-AZ-4681-01A 8 0 Out-of-frame Inter-chr q25.3 25221 ChimerSeq STARFusion TCGA_RNA-Seq POLN-TFF3 POLN chr4 2078366 - TFF3 chr21 43733709 - Exonic hg19 COAD TCGA-AZ-4681-01A 7 0 Out-of-frame Inter-chr p16.3 q22.3 25222 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 COAD TCGA-AZ-4681-01A 7 0 Out-of-frame Inter-chr p13.13 q13.1 25223 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31802768 + C2 chr6 31868874 + Exonic hg19 COAD TCGA-AZ-4681-01A 6 0 Out-of-frame Intra-chr p21.33 25224 ChimerSeq STARFusion TCGA_RNA-Seq KNDC1-CRIP1 KNDC1 chr10 134996878 + CRIP1 chr14 105954667 + Exonic hg19 COAD TCGA-AZ-4681-01A 6 0 Out-of-frame Inter-chr q26.3 q32.33 25225 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-NELFE ZBTB12 chr6 31868874 - NELFE chr6 31922423 - Exonic hg19 COAD TCGA-AZ-4681-01A 6 0 Out-of-frame Intra-chr p21.33 Transcription factor 25226 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1107-PPDPF KIAA1107 chr1 92633439 + PPDPF chr20 62153106 + Exonic hg19 COAD TCGA-AZ-4681-01A 5 0 Out-of-frame Inter-chr p22.1 q13.33 25227 ChimerSeq STARFusion TCGA_RNA-Seq NAIP-RPS4X NAIP chr5 70281588 - RPS4X chrX 71492623 - Exonic hg19 COAD TCGA-AZ-4681-01A 5 0 Out-of-frame Inter-chr q13.2 q13.1 25228 ChimerSeq STARFusion TCGA_RNA-Seq RPL8-EFS RPL8 chr8 146015780 - EFS chr14 23828978 - Exonic hg19 COAD TCGA-AZ-4681-01A 5 0 Out-of-frame Inter-chr q24.3 q11.2 25229 ChimerSeq STARFusion TCGA_RNA-Seq SMIM22-LMX1B SMIM22 chr16 4845858 + LMX1B chr9 129456044 + Exonic hg19 COAD TCGA-AZ-4681-01A 5 0 Out-of-frame Inter-chr p13.3 q33.3 Transcription factor 25230 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-LSM2 ZBTB12 chr6 31868873 - LSM2 chr6 31765542 - Exonic hg19 COAD TCGA-AZ-4681-01A 5 0 Out-of-frame Intra-chr p21.33 Transcription factor 25231 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-LSM2 ZBTB12 chr6 31868874 - LSM2 chr6 31765370 - Exonic hg19 COAD TCGA-AZ-4681-01A 5 0 Out-of-frame Intra-chr p21.33 Transcription factor 25232 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-NEU1 ZBTB12 chr6 31868873 - NEU1 chr6 31827099 - Exonic hg19 COAD TCGA-AZ-4681-01A 5 0 Out-of-frame Intra-chr p21.33 Transcription factor 25233 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868873 - SLC44A4 chr6 31832837 - Exonic hg19 COAD TCGA-AZ-4681-01A 5 0 Out-of-frame Intra-chr p21.33 Transcription factor 25234 ChimerSeq STARFusion TCGA_RNA-Seq ALDH2-CD24P2 ALDH2 chr12 112221074 + CD24P2 chr15 56363624 + Exonic hg19 COAD TCGA-AZ-4681-01A 4 0 Out-of-frame Inter-chr q24.12 q21.3 25235 ChimerSeq STARFusion TCGA_RNA-Seq ALDH2-CKB ALDH2 chr12 112221076 + CKB chr14 103986278 - Exonic hg19 COAD TCGA-AZ-4681-01A 4 0 Out-of-frame Inter-chr q24.12 q32.33 25236 ChimerSeq STARFusion TCGA_RNA-Seq ALDH2-CLIC1 ALDH2 chr12 112221082 + CLIC1 chr6 31698653 - Exonic hg19 COAD TCGA-AZ-4681-01A 4 0 Out-of-frame Inter-chr q24.12 25237 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31805037 + C2 chr6 31868874 + Exonic hg19 COAD TCGA-AZ-4681-01A 4 0 Out-of-frame Intra-chr p21.33 25238 ChimerSeq STARFusion TCGA_RNA-Seq FTL-ZNF536 FTL chr19 49469662 + ZNF536 chr19 31039216 + Exonic hg19 COAD TCGA-AZ-4681-01A 4 0 Out-of-frame Intra-chr q13.33 q12 Transcription factor 25239 ChimerSeq STARFusion TCGA_RNA-Seq RPL14-YIPF6 RPL14 chr3 40499447 + YIPF6 chrX 67718628 + Exonic hg19 COAD TCGA-AZ-4681-01A 4 0 Out-of-frame Inter-chr p22.1 q12 25240 ChimerSeq STARFusion TCGA_RNA-Seq YWHAQP5-CLDN7 YWHAQP5 chr2 99311421 + CLDN7 chr17 7163623 - Exonic hg19 COAD TCGA-AZ-4681-01A 4 0 Out-of-frame Inter-chr q11.2 p13.1 25241 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-LSM2 ZBTB12 chr6 31868873 - LSM2 chr6 31765592 - Exonic hg19 COAD TCGA-AZ-4681-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 25242 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-NELFE ZBTB12 chr6 31868874 - NELFE chr6 31922499 - Exonic hg19 COAD TCGA-AZ-4681-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 25243 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31831073 - Exonic hg19 COAD TCGA-AZ-4681-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 25244 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868873 - SLC44A4 chr6 31831427 - Exonic hg19 COAD TCGA-AZ-4681-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 25245 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31833130 - Exonic hg19 COAD TCGA-AZ-4681-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 25246 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-VARS ZBTB12 chr6 31868876 - VARS chr6 31745365 - Exonic hg19 COAD TCGA-AZ-4681-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 25247 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-VARS ZBTB12 chr6 31868874 - VARS chr6 31747585 - Exonic hg19 COAD TCGA-AZ-4681-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 25248 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-IFITM1 ZSWIM4 chr19 13942624 + IFITM1 chr11 314059 + Exonic hg19 COAD TCGA-AZ-4681-01A 4 0 Out-of-frame Inter-chr p13.13 p15.5 Oncogene 25249 ChimerSeq STARFusion TCGA_RNA-Seq ATP5A1-HAUS1 ATP5A1 chr18 43684103 - HAUS1 chr18 43698147 + Exonic hg19 COAD TCGA-CM-5348-01A 3 27 5'UTR-5'UTR Intra-chr q21.1 q21.1 Seq+ 25250 ChimerSeq STARFusion TCGA_RNA-Seq ATP5A1-HAUS1 ATP5A1 chr18 43684103 - HAUS1 chr18 43699892 + Exonic hg19 COAD TCGA-CM-5348-01A 2 27 5'UTR-5'UTR Intra-chr q21.1 q21.1 Seq+ 25251 ChimerSeq STARFusion TCGA_RNA-Seq DPH6-SHC4 DPH6 chr15 35838320 - SHC4 chr15 49127219 - Exonic hg19 COAD TCGA-CM-5348-01A 8 3 Out-of-frame Intra-chr q14 q21.1 Seq+ 25252 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-ERCC8 YWHAE chr17 1303341 - ERCC8 chr5 60224786 - Exonic hg19 COAD TCGA-CM-5348-01A 6 11 Out-of-frame Inter-chr p13.3 q12.1 Seq+ 25253 ChimerSeq STARFusion TCGA_RNA-Seq TLN2-LACTB TLN2 chr15 62881961 + LACTB chr15 63414835 + Exonic hg19 COAD TCGA-CM-5348-01A 4 17 5'UTR-CDS Intra-chr q22.2 q22.2 Seq+ 25254 ChimerSeq STARFusion TCGA_RNA-Seq OPN3-FH OPN3 chr1 241803184 - FH chr1 241680616 - Exonic hg19 COAD TCGA-CM-5348-01A 5 8 Out-of-frame Intra-chr q43 q43 Oncogene Tumor suppressor gene Seq+ 25255 ChimerSeq STARFusion TCGA_RNA-Seq SLCO3A1-DPH6 SLCO3A1 chr15 92669489 + DPH6 chr15 35834708 - Exonic hg19 COAD TCGA-CM-5348-01A 4 10 Out-of-frame Intra-chr q26.1 q14 Seq+ 25256 ChimerSeq STARFusion TCGA_RNA-Seq C15orf41-SLCO3A1 C15orf41 chr15 36872162 + SLCO3A1 chr15 92663695 + Exonic hg19 COAD TCGA-CM-5348-01A 2 12 Out-of-frame Intra-chr q14 q26.1 Seq+ 25257 ChimerSeq STARFusion TCGA_RNA-Seq SPATA2-RTFDC1 SPATA2 chr20 48531917 - RTFDC1 chr20 55088371 + Exonic hg19 COAD TCGA-G4-6315-01A 2 19 Out-of-frame Intra-chr q13.13 q13.31 Seq+ 25258 ChimerSeq STARFusion TCGA_RNA-Seq EIF3I-SLC12A2 EIF3I chr1 32690076 + SLC12A2 chr5 127486933 + Exonic hg19 COAD TCGA-AA-A03J-01A 3 0 In-Frame Inter-chr p35.2 q23.3 25259 ChimerSeq STARFusion TCGA_RNA-Seq INSM1-PABPC1 INSM1 chr20 20349019 + PABPC1 chr8 101719188 - Exonic hg19 COAD TCGA-AA-A03J-01A 3 0 Out-of-frame Inter-chr p11.23 Transcription factor q22.3 25260 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-RSBN1L PTPN12 chr7 77247882 + RSBN1L chr7 77365727 + Exonic hg19 COAD TCGA-AM-5821-01A 9 43 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 25261 ChimerSeq STARFusion TCGA_RNA-Seq RNF170-ADAM32 RNF170 chr8 42742871 - ADAM32 chr8 39079129 + Exonic hg19 COAD TCGA-CM-6166-01A 2 8 Out-of-frame Intra-chr p11.21 Seq+ 25262 ChimerSeq STARFusion TCGA_RNA-Seq VPS53-PCNXL2 VPS53 chr17 602571 - PCNXL2 chr1 233231609 - Exonic hg19 COAD TCGA-AA-3952-01A 28 0 Out-of-frame Inter-chr Tumor suppressor gene Seq+ 25263 ChimerSeq STARFusion TCGA_RNA-Seq FTL-ZNF536 FTL chr19 49469662 + ZNF536 chr19 31039216 + Exonic hg19 COAD TCGA-AA-3952-01A 12 0 Out-of-frame Intra-chr q13.33 q12 Transcription factor 25264 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA5-TEAD4 PLEKHA5 chr12 19285384 + TEAD4 chr12 3103904 + Exonic hg19 COAD TCGA-AA-3952-01A 5 0 CDS-5'UTR Intra-chr p12.3 p13.33 Transcription factor 25265 ChimerSeq STARFusion TCGA_RNA-Seq RPS27-FAM159B RPS27 chr1 153963699 + FAM159B chr5 63986324 + Exonic hg19 COAD TCGA-AA-3952-01A 4 0 3'UTR-5'UTR Inter-chr q21.3 q12.3 25266 ChimerSeq STARFusion TCGA_RNA-Seq CTSD-CENPB CTSD chr11 1776150 - CENPB chr20 3767191 - Exonic hg19 COAD TCGA-AA-3684-01A 4 0 Out-of-frame Inter-chr p15.5 p13 Transcription factor 25267 ChimerSeq STARFusion TCGA_RNA-Seq EDF1-FAM159B EDF1 chr9 139757358 - FAM159B chr5 63986324 + Exonic hg19 COAD TCGA-AA-3684-01A 3 0 CDS-5'UTR Inter-chr q34.3 q12.3 25268 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-FLOT2 FAM222B chr17 27169700 - FLOT2 chr17 27216044 - Exonic hg19 COAD TCGA-AA-3684-01A 2 0 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 25269 ChimerSeq STARFusion TCGA_RNA-Seq MGRN1-IDH2 MGRN1 chr16 4715152 + IDH2 chr15 90630807 - Exonic hg19 COAD TCGA-AA-3684-01A 2 0 In-Frame Inter-chr p13.3 q26.1 Oncogene 25270 ChimerSeq STARFusion TCGA_RNA-Seq CRIP2-UBA1 CRIP2 chr14 105944944 + UBA1 chrX 47065649 + Exonic hg19 COAD TCGA-AA-3556-01A 3 0 Out-of-frame Inter-chr q32.33 p11.3 25271 ChimerSeq STARFusion TCGA_RNA-Seq CTSA-ASPSCR1 CTSA chr20 44520260 + ASPSCR1 chr17 79972719 + Exonic hg19 COAD TCGA-AA-3556-01A 3 0 Out-of-frame Inter-chr q13.12 q25.3 25272 ChimerSeq STARFusion TCGA_RNA-Seq FIS1-PIK3CG FIS1 chr7 100895176 - PIK3CG chr7 106545554 + Exonic hg19 COAD TCGA-AA-3556-01A 3 0 5'UTR-CDS Intra-chr q22.1 q22.3 Oncogene 25273 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 COAD TCGA-AA-3556-01A 3 0 Out-of-frame Inter-chr q13.33 p21.1 25274 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-HMCN2 IGH@ chr14 106518401 - HMCN2 chr9 133306740 + Exonic hg19 COAD TCGA-AA-3556-01A 3 0 Out-of-frame Inter-chr 32.33 q34.11 25275 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076852 + IGH@ chr14 106209410 - Exonic hg19 COAD TCGA-AA-3850-01A 3 0 Out-of-frame Inter-chr q21.2 32.33 25276 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076852 + IGHG1 chr14 106209410 - Exonic hg19 COAD TCGA-AA-3850-01A 3 0 Out-of-frame Inter-chr q21.2 q32.33 25277 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-INPP5A IGH@ chr14 106111040 - INPP5A chr10 134511407 + Exonic hg19 COAD TCGA-AA-3850-01A 3 0 Out-of-frame Inter-chr 32.33 q26.3 25278 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-INPP5A IGHG1 chr14 106209321 - INPP5A chr10 134511407 + Exonic hg19 COAD TCGA-AA-3850-01A 3 0 Out-of-frame Inter-chr q32.33 q26.3 25279 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-TYRO3 IGKC chr2 89156966 - TYRO3 chr15 41854865 + Exonic hg19 COAD TCGA-AA-3850-01A 3 0 Out-of-frame Inter-chr p11.2 q15.1 TK:Axl 25280 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 COAD TCGA-AA-A01Q-01A 5 0 Out-of-frame Inter-chr p13.13 q13.1 25281 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31831073 - Exonic hg19 COAD TCGA-AA-A01Q-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 25282 ChimerSeq STARFusion TCGA_RNA-Seq AIF1L-RPL13AP7 AIF1L chr9 133995770 + RPL13AP7 chr21 26734505 + Exonic hg19 COAD TCGA-AA-A01Q-01A 3 0 Out-of-frame Inter-chr q34.12 q21.2 25283 ChimerSeq STARFusion TCGA_RNA-Seq EDF1-FAM159B EDF1 chr9 139757358 - FAM159B chr5 63986324 + Exonic hg19 COAD TCGA-AA-A01Q-01A 3 0 CDS-5'UTR Inter-chr q34.3 q12.3 25284 ChimerSeq STARFusion TCGA_RNA-Seq DOPEY1-RNF144B DOPEY1 chr6 83777498 + RNF144B chr6 18399730 + Exonic hg19 COAD TCGA-AA-3685-01A 4 8 5'UTR-5'UTR Intra-chr q14.1 p22.3 Seq+ 25285 ChimerSeq STARFusion TCGA_RNA-Seq WBSCR22-LIMK1 WBSCR22 chr7 73112024 + LIMK1 chr7 73520205 + Exonic hg19 COAD TCGA-CM-6675-01A 3 7 In-Frame Intra-chr q11.23 TKL:LISK Seq+ 25286 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-SND1 PTK2 chr8 142011224 - SND1 chr7 127447538 + Exonic hg19 COAD TCGA-CM-6675-01A 2 1 5'UTR-CDS Inter-chr q24.3 q32.1 25287 ChimerSeq STARFusion TCGA_RNA-Seq UBALD1-TIMP1 UBALD1 chr16 4659941 - TIMP1 chrX 47444663 + Exonic hg19 COAD TCGA-AA-3955-01A 3 0 Out-of-frame Inter-chr p13.3 p11.3 25288 ChimerSeq STARFusion TCGA_RNA-Seq GFOD2-NUTF2 GFOD2 chr16 67753066 - NUTF2 chr16 67899005 + Exonic hg19 COAD TCGA-AA-3955-01A 2 0 5'UTR-5'UTR Intra-chr q22.1 q22.1 25289 ChimerSeq STARFusion TCGA_RNA-Seq KIAA2026-INSL6 KIAA2026 chr9 5988345 - INSL6 chr9 5164265 - Exonic hg19 COAD TCGA-G4-6298-01A 2 27 Out-of-frame Intra-chr p24.1 p24.1 Seq+ 25290 ChimerSeq STARFusion TCGA_RNA-Seq CRLS1-TRMT6 CRLS1 chr20 5990558 + TRMT6 chr20 5924899 - Exonic hg19 COAD TCGA-5M-AATA-01A 2 17 In-Frame Intra-chr p12.3 p12.3 Seq+ 25291 ChimerSeq STARFusion TCGA_RNA-Seq CDK13-RALA CDK13 chr7 40041630 + RALA chr7 39745722 + Exonic hg19 COAD TCGA-5M-AATA-01A 2 16 Out-of-frame Intra-chr p14.1 p14.1 Seq+ 25292 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12022903 + NTRK3 chr15 88483984 - Exonic hg19 COAD TCGA-CK-5913-01A 14 41 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 25293 ChimerSeq STARFusion TCGA_RNA-Seq PXDN-MYT1L PXDN chr2 1748028 - MYT1L chr2 1844615 - Exonic hg19 COAD TCGA-CK-5913-01A 2 2 In-Frame Intra-chr p25.3 p25.3 Transcription factor Seq+ 25294 ChimerSeq STARFusion TCGA_RNA-Seq CTSD-CENPB CTSD chr11 1776150 - CENPB chr20 3767191 - Exonic hg19 COAD TCGA-AA-A01D-01A 4 0 Out-of-frame Inter-chr p15.5 p13 Transcription factor 25295 ChimerSeq STARFusion TCGA_RNA-Seq ABHD17A-GSTP1 ABHD17A chr19 1881404 - GSTP1 chr11 67352611 + Exonic hg19 COAD TCGA-AA-A01D-01A 3 0 Out-of-frame Inter-chr p13.3 q13.2 Tumor suppressor gene 25296 ChimerSeq STARFusion TCGA_RNA-Seq WDR85-ZMYND19 WDR85 chr9 140473077 - ZMYND19 chr9 140483170 - Exonic hg19 COAD TCGA-G4-6309-01A 2 3 In-Frame Intra-chr q34.3 Seq+ 25297 ChimerSeq STARFusion TCGA_RNA-Seq DCC-AARD DCC chr18 50278744 + AARD chr8 117954797 + Exonic hg19 COAD TCGA-AA-3870-01A 4 0 Out-of-frame Inter-chr q21.2 Oncogene Tumor suppressor gene q24.11 25298 ChimerSeq STARFusion TCGA_RNA-Seq ATG10-RPS6 ATG10 chr5 81572049 + RPS6 chr9 19376617 - Exonic hg19 COAD TCGA-AA-3870-01A 3 0 Out-of-frame Inter-chr q14.1 p22.1 25299 ChimerSeq STARFusion TCGA_RNA-Seq FLNA-PTRF FLNA chrX 153580628 - PTRF chr17 40556234 - Exonic hg19 COAD TCGA-AA-3870-01A 3 0 Out-of-frame Inter-chr q28 Tumor suppressor gene 25300 ChimerSeq STARFusion TCGA_RNA-Seq MXD3-C19orf43 MXD3 chr5 176733470 - C19orf43 chr19 12841541 - Exonic hg19 COAD TCGA-AA-3870-01A 3 0 Out-of-frame Inter-chr q35.3 Transcription factor p13.13 25301 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-MLH1 IGL@ chr22 22786803 + MLH1 chr3 37035054 + Exonic hg19 COAD TCGA-CA-6719-01A 26 0 Out-of-frame Inter-chr q11.22 p22.2 Oncogene Tumor suppressor gene 25302 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-MLH1 IGL@ chr22 22735716 + MLH1 chr3 37035054 + Exonic hg19 COAD TCGA-CA-6719-01A 25 0 Out-of-frame Inter-chr q11.22 p22.2 Oncogene Tumor suppressor gene 25303 ChimerSeq STARFusion TCGA_RNA-Seq CWC25-JUP CWC25 chr17 36981419 - JUP chr17 39915122 - Exonic hg19 COAD TCGA-AD-6899-01A 8 40 In-Frame Intra-chr q12 q21.2 Tumor suppressor gene Seq+ 25304 ChimerSeq STARFusion TCGA_RNA-Seq ATE1-ANXA10 ATE1 chr10 123596233 - ANXA10 chr4 169060637 + Exonic hg19 COAD TCGA-AD-6899-01A 3 3 Out-of-frame Inter-chr q26.13 q32.3 Seq+ 25305 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-APOLD1 ETV6 chr12 11803094 + APOLD1 chr12 12965195 + Exonic hg19 COAD TCGA-A6-6653-01A 2 22 CDS-3'UTR Intra-chr p13.2 Tumor suppressor gene Transcription factor p13.1 Seq+ 25306 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-APOLD1 ETV6 chr12 11803094 + APOLD1 chr12 12939843 + Exonic hg19 COAD TCGA-A6-6653-01A 2 22 In-Frame Intra-chr p13.2 Tumor suppressor gene Transcription factor p13.1 Seq+ 25307 ChimerSeq STARFusion TCGA_RNA-Seq TTLL1-PACSIN2 TTLL1 chr22 43442416 - PACSIN2 chr22 43308163 - Exonic hg19 COAD TCGA-WS-AB45-01A 2 0 CDS-5'UTR Intra-chr q13.2 q13.2 25308 ChimerSeq STARFusion TCGA_RNA-Seq CDC42-CELA3A CDC42 chr1 22379235 + CELA3A chr1 22331940 + Exonic hg19 COAD TCGA-G4-6588-01A 2 5 5'UTR-CDS Intra-chr p36.12 p36.12 Seq+ 25309 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-HMGA1 RCC1 chr1 28834672 + HMGA1 chr6 34208514 + Exonic hg19 COAD TCGA-G4-6588-01A 3 0 5'UTR-5'UTR Inter-chr p35.3 p21.31 Transcription factor Seq+ 25310 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-HMGA1 SNHG3 chr1 28834672 + HMGA1 chr6 34208514 + Exonic hg19 COAD TCGA-G4-6588-01A 3 0 5'UTR-5'UTR Inter-chr p35.3 p21.31 Transcription factor 25311 ChimerSeq STARFusion TCGA_RNA-Seq EXOC4-CHCHD3 EXOC4 chr7 133059756 + CHCHD3 chr7 132754989 - Exonic hg19 COAD TCGA-G4-6626-01A 22 38 In-Frame Intra-chr q33 q33 Transcription factor Seq+ 25312 ChimerSeq STARFusion TCGA_RNA-Seq GAS2L3-SND1 GAS2L3 chr12 100995531 + SND1 chr7 127334882 + Exonic hg19 COAD TCGA-G4-6626-01A 7 26 In-Frame Inter-chr q23.1 q32.1 Seq+ 25313 ChimerSeq STARFusion TCGA_RNA-Seq NSMAF-TOX NSMAF chr8 59572132 - TOX chr8 59764364 - Exonic hg19 COAD TCGA-G4-6626-01A 3 5 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 25314 ChimerSeq STARFusion TCGA_RNA-Seq C7orf50-INTS1 C7orf50 chr7 1166893 - INTS1 chr7 1535900 - Exonic hg19 COAD TCGA-G4-6626-01A 2 5 In-Frame Intra-chr p22.3 p22.3 Seq+ 25315 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGA1 SKIV2L2 chr5 54624639 + PCDHGA1 chr5 140874374 + Exonic hg19 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 25316 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGA10 SKIV2L2 chr5 54624639 + PCDHGA10 chr5 140874374 + Exonic hg19 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 Seq+ 25317 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGA11 SKIV2L2 chr5 54624639 + PCDHGA11 chr5 140874374 + Exonic hg19 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 Seq+ 25318 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGA12 SKIV2L2 chr5 54624639 + PCDHGA12 chr5 140874374 + Exonic hg19 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 Seq+ 25319 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGA2 SKIV2L2 chr5 54624639 + PCDHGA2 chr5 140874374 + Exonic hg19 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 25320 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGA3 SKIV2L2 chr5 54624639 + PCDHGA3 chr5 140874374 + Exonic hg19 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 25321 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGA4 SKIV2L2 chr5 54624639 + PCDHGA4 chr5 140874374 + Exonic hg19 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 25322 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGA5 SKIV2L2 chr5 54624639 + PCDHGA5 chr5 140874374 + Exonic hg19 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 25323 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGA6 SKIV2L2 chr5 54624639 + PCDHGA6 chr5 140874374 + Exonic hg19 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 25324 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGA7 SKIV2L2 chr5 54624639 + PCDHGA7 chr5 140874374 + Exonic hg19 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 25325 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGA8 SKIV2L2 chr5 54624639 + PCDHGA8 chr5 140874374 + Exonic hg19 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 Seq+ 25326 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGA9 SKIV2L2 chr5 54624639 + PCDHGA9 chr5 140874374 + Exonic hg19 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 Seq+ 25327 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGB1 SKIV2L2 chr5 54624639 + PCDHGB1 chr5 140874374 + Exonic hg19 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 25328 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGB2 SKIV2L2 chr5 54624639 + PCDHGB2 chr5 140874374 + Exonic hg19 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 25329 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGB3 SKIV2L2 chr5 54624639 + PCDHGB3 chr5 140874374 + Exonic hg19 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 25330 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGB4 SKIV2L2 chr5 54624639 + PCDHGB4 chr5 140874374 + Exonic hg19 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 Seq+ 25331 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGB5 SKIV2L2 chr5 54624639 + PCDHGB5 chr5 140874374 + Exonic hg19 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 Seq+ 25332 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGB6 SKIV2L2 chr5 54624639 + PCDHGB6 chr5 140874374 + Exonic hg19 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 Seq+ 25333 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGB7 SKIV2L2 chr5 54624639 + PCDHGB7 chr5 140874374 + Exonic hg19 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 Seq+ 25334 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGC3 SKIV2L2 chr5 54624639 + PCDHGC3 chr5 140874374 + Exonic hg19 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 Tumor suppressor gene Seq+ 25335 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGC4 SKIV2L2 chr5 54624639 + PCDHGC4 chr5 140874374 + Exonic hg19 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 Seq+ 25336 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGC5 SKIV2L2 chr5 54624639 + PCDHGC5 chr5 140874374 + Exonic hg19 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 Seq+ 25337 ChimerSeq STARFusion TCGA_RNA-Seq SENP3-ABR SENP3 chr17 7470322 + ABR chr17 962107 - Exonic hg19 COAD TCGA-CM-6163-01A 15 32 In-Frame Intra-chr p13.1 p13.3 Seq+ 25338 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGA1 SKIV2L2 chr5 54624639 + PCDHGA1 chr5 140884960 + Exonic hg19 COAD TCGA-CM-6163-01A 5 37 In-Frame Intra-chr q11.2 q31.3 25339 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGA10 SKIV2L2 chr5 54624639 + PCDHGA10 chr5 140884960 + Exonic hg19 COAD TCGA-CM-6163-01A 5 37 In-Frame Intra-chr q11.2 q31.3 Seq+ 25340 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGA11 SKIV2L2 chr5 54624639 + PCDHGA11 chr5 140884960 + Exonic hg19 COAD TCGA-CM-6163-01A 5 37 In-Frame Intra-chr q11.2 q31.3 Seq+ 25341 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGA12 SKIV2L2 chr5 54624639 + PCDHGA12 chr5 140884960 + Exonic hg19 COAD TCGA-CM-6163-01A 5 37 In-Frame Intra-chr q11.2 q31.3 Seq+ 25342 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGA2 SKIV2L2 chr5 54624639 + PCDHGA2 chr5 140884960 + Exonic hg19 COAD TCGA-CM-6163-01A 5 37 In-Frame Intra-chr q11.2 q31.3 25343 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGA3 SKIV2L2 chr5 54624639 + PCDHGA3 chr5 140884960 + Exonic hg19 COAD TCGA-CM-6163-01A 5 37 In-Frame Intra-chr q11.2 q31.3 25344 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGA4 SKIV2L2 chr5 54624639 + PCDHGA4 chr5 140884960 + Exonic hg19 COAD TCGA-CM-6163-01A 5 37 In-Frame Intra-chr q11.2 q31.3 25345 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGA5 SKIV2L2 chr5 54624639 + PCDHGA5 chr5 140884960 + Exonic hg19 COAD TCGA-CM-6163-01A 5 37 In-Frame Intra-chr q11.2 q31.3 25346 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGA6 SKIV2L2 chr5 54624639 + PCDHGA6 chr5 140884960 + Exonic hg19 COAD TCGA-CM-6163-01A 5 37 In-Frame Intra-chr q11.2 q31.3 25347 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGA7 SKIV2L2 chr5 54624639 + PCDHGA7 chr5 140884960 + Exonic hg19 COAD TCGA-CM-6163-01A 5 37 In-Frame Intra-chr q11.2 q31.3 25348 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGA8 SKIV2L2 chr5 54624639 + PCDHGA8 chr5 140884960 + Exonic hg19 COAD TCGA-CM-6163-01A 5 37 In-Frame Intra-chr q11.2 q31.3 Seq+ 25349 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGA9 SKIV2L2 chr5 54624639 + PCDHGA9 chr5 140884960 + Exonic hg19 COAD TCGA-CM-6163-01A 5 37 In-Frame Intra-chr q11.2 q31.3 Seq+ 25350 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGB1 SKIV2L2 chr5 54624639 + PCDHGB1 chr5 140884960 + Exonic hg19 COAD TCGA-CM-6163-01A 5 37 In-Frame Intra-chr q11.2 q31.3 25351 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGB2 SKIV2L2 chr5 54624639 + PCDHGB2 chr5 140884960 + Exonic hg19 COAD TCGA-CM-6163-01A 5 37 In-Frame Intra-chr q11.2 q31.3 25352 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGB3 SKIV2L2 chr5 54624639 + PCDHGB3 chr5 140884960 + Exonic hg19 COAD TCGA-CM-6163-01A 5 37 In-Frame Intra-chr q11.2 q31.3 25353 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGB4 SKIV2L2 chr5 54624639 + PCDHGB4 chr5 140884960 + Exonic hg19 COAD TCGA-CM-6163-01A 5 37 In-Frame Intra-chr q11.2 q31.3 Seq+ 25354 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGB5 SKIV2L2 chr5 54624639 + PCDHGB5 chr5 140884960 + Exonic hg19 COAD TCGA-CM-6163-01A 5 37 In-Frame Intra-chr q11.2 q31.3 Seq+ 25355 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGB6 SKIV2L2 chr5 54624639 + PCDHGB6 chr5 140884960 + Exonic hg19 COAD TCGA-CM-6163-01A 5 37 In-Frame Intra-chr q11.2 q31.3 Seq+ 25356 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGB7 SKIV2L2 chr5 54624639 + PCDHGB7 chr5 140884960 + Exonic hg19 COAD TCGA-CM-6163-01A 5 37 In-Frame Intra-chr q11.2 q31.3 Seq+ 25357 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGC3 SKIV2L2 chr5 54624639 + PCDHGC3 chr5 140884960 + Exonic hg19 COAD TCGA-CM-6163-01A 5 37 In-Frame Intra-chr q11.2 q31.3 Tumor suppressor gene Seq+ 25358 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGC4 SKIV2L2 chr5 54624639 + PCDHGC4 chr5 140884960 + Exonic hg19 COAD TCGA-CM-6163-01A 5 37 In-Frame Intra-chr q11.2 q31.3 Seq+ 25359 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-PCDHGC5 SKIV2L2 chr5 54624639 + PCDHGC5 chr5 140884960 + Exonic hg19 COAD TCGA-CM-6163-01A 5 37 In-Frame Intra-chr q11.2 q31.3 Seq+ 25360 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-TYRO3 IGKC chr2 89156966 - TYRO3 chr15 41854865 + Exonic hg19 COAD TCGA-AA-3939-01A 4 0 Out-of-frame Inter-chr p11.2 q15.1 TK:Axl 25361 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-AA-3939-01A 3 0 Out-of-frame Inter-chr p22.1 25362 ChimerSeq STARFusion TCGA_RNA-Seq AIF1L-RPL13AP7 AIF1L chr9 133995770 + RPL13AP7 chr21 26734505 + Exonic hg19 COAD TCGA-AA-3939-01A 3 0 Out-of-frame Inter-chr q34.12 q21.2 25363 ChimerSeq STARFusion TCGA_RNA-Seq KCTD5-LOC652276 KCTD5 chr16 2732801 + LOC652276 chr16 2660463 + Exonic hg19 COAD TCGA-A6-5662-01A 2 6 CDS-5'UTR Intra-chr p13.3 25364 ChimerSeq STARFusion TCGA_RNA-Seq C6orf222-ETV7 C6orf222 chr6 36293060 - ETV7 chr6 36322464 - Exonic hg19 COAD TCGA-D5-6530-01A 26 110 Out-of-frame Intra-chr p21.31 p21.31 Transcription factor Seq+ 25365 ChimerSeq STARFusion TCGA_RNA-Seq MICALL2-TMEM120A MICALL2 chr7 1486349 - TMEM120A chr7 75617834 - Exonic hg19 COAD TCGA-G4-6627-01A 2 4 In-Frame Intra-chr p22.3 q11.23 25366 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-TUBD1 WIPF2 chr17 38375744 + TUBD1 chr17 57944110 - Exonic hg19 COAD TCGA-AA-3994-01A 21 0 5'UTR-CDS Intra-chr q21.2 q23.1 Seq+ 25367 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-TADA2A FBXL20 chr17 37499433 - TADA2A chr17 35834661 + Exonic hg19 COAD TCGA-AA-3994-01A 7 0 Out-of-frame Intra-chr q12 q12 25368 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-TUBD1 WIPF2 chr17 38375744 + TUBD1 chr17 57941208 - Exonic hg19 COAD TCGA-AA-3994-01A 6 0 5'UTR-CDS Intra-chr q21.2 q23.1 Seq+ 25369 ChimerSeq STARFusion TCGA_RNA-Seq CISD3-STARD3 CISD3 chr17 36887048 + STARD3 chr17 37813261 + Exonic hg19 COAD TCGA-AA-3994-01A 5 0 In-Frame Intra-chr q12 Seq+ 25370 ChimerSeq STARFusion TCGA_RNA-Seq KSR1-NOS2 KSR1 chr17 25935036 + NOS2 chr17 26086101 - Exonic hg19 COAD TCGA-AA-3994-01A 3 0 In-Frame Intra-chr q11.2 TKL:RAF q11.2 25371 ChimerSeq STARFusion TCGA_RNA-Seq S100A16-RPL14 S100A16 chr1 153579644 - RPL14 chr3 40503533 + Exonic hg19 COAD TCGA-AA-3994-01A 3 0 Out-of-frame Inter-chr q21.3 p22.1 25372 ChimerSeq STARFusion TCGA_RNA-Seq SNORA50-CNOT1 SNORA50 chr16 58593708 - CNOT1 chr16 58594266 - Exonic hg19 COAD TCGA-A6-3809-01A 3 7 3'UTR-CDS Intra-chr q23.3 q21 25373 ChimerSeq STARFusion TCGA_RNA-Seq HCG4P3-ZNF536 HCG4P3 chr6 29974382 - ZNF536 chr19 31039209 + Exonic hg19 COAD TCGA-A6-2676-01A 6 0 Out-of-frame Inter-chr q12 Transcription factor 25374 ChimerSeq STARFusion TCGA_RNA-Seq RC3H1-SERPINC1 RC3H1 chr1 173991234 - SERPINC1 chr1 173876652 - Exonic hg19 COAD TCGA-A6-2676-01A 5 0 5'UTR-CDS Intra-chr q25.1 q25.1 25375 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-A6-2676-01A 4 0 Out-of-frame Inter-chr p22.1 25376 ChimerSeq STARFusion TCGA_RNA-Seq DAAM2-COX5B DAAM2 chr6 39816363 + COX5B chr2 98264525 + Exonic hg19 COAD TCGA-A6-2676-01A 3 0 Out-of-frame Inter-chr p21.2 q11.2 25377 ChimerSeq STARFusion TCGA_RNA-Seq PRKAG2-LRRC26 PRKAG2 chr7 151329352 - LRRC26 chr9 140063639 - Exonic hg19 COAD TCGA-A6-2676-01A 3 0 Out-of-frame Inter-chr q36.1 q34.3 25378 ChimerSeq STARFusion TCGA_RNA-Seq PRKAG2-MIR3621 PRKAG2 chr7 151329352 - MIR3621 chr9 140063639 - Exonic hg19 COAD TCGA-A6-2676-01A 3 0 Out-of-frame Inter-chr q36.1 q34.3 25379 ChimerSeq STARFusion TCGA_RNA-Seq RNA5SP92-EEF1A1 RNA5SP92 chr2 33558018 + EEF1A1 chr6 74229184 - Exonic hg19 COAD TCGA-A6-2676-01A 3 0 Out-of-frame Inter-chr p22.3 q13 Tumor suppressor gene 25380 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-NEU1 ZBTB12 chr6 31868874 - NEU1 chr6 31829028 - Exonic hg19 COAD TCGA-A6-2676-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 25381 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 COAD TCGA-A6-2676-01A 3 0 Out-of-frame Inter-chr p13.13 q13.1 25382 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-AA-A00Q-01A 4 0 Out-of-frame Inter-chr p22.1 25383 ChimerSeq STARFusion TCGA_RNA-Seq PLCXD1-IGHG2 PLCXD1 chrX 209756 + IGHG2 chr14 106111129 - Exonic hg19 COAD TCGA-AA-A00Q-01A 4 0 Out-of-frame Inter-chr p22.33 25384 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 COAD TCGA-AA-A00Q-01A 4 0 Out-of-frame Inter-chr p13.13 q13.1 25385 ChimerSeq STARFusion TCGA_RNA-Seq INSM1-PABPC1 INSM1 chr20 20349019 + PABPC1 chr8 101719188 - Exonic hg19 COAD TCGA-AA-A00Q-01A 3 0 Out-of-frame Inter-chr p11.23 Transcription factor q22.3 25386 ChimerSeq STARFusion TCGA_RNA-Seq RPL27-CCDC57 RPL27 chr17 41154760 + CCDC57 chr17 80086381 - Exonic hg19 COAD TCGA-AA-A00Q-01A 3 0 Out-of-frame Intra-chr q21.31 q25.3 25387 ChimerSeq STARFusion TCGA_RNA-Seq RPS27-FAM159B RPS27 chr1 153963699 + FAM159B chr5 63986324 + Exonic hg19 COAD TCGA-AA-A00Q-01A 3 0 3'UTR-5'UTR Inter-chr q21.3 q12.3 25388 ChimerSeq STARFusion TCGA_RNA-Seq TMEM203-ITM2C TMEM203 chr9 140099430 - ITM2C chr2 231729684 + Exonic hg19 COAD TCGA-AA-3842-01A 4 0 Out-of-frame Inter-chr q34.3 q37.1 25389 ChimerSeq STARFusion TCGA_RNA-Seq EPHA1-C11orf80 EPHA1 chr7 143095694 - C11orf80 chr11 66583524 + Exonic hg19 COAD TCGA-AA-3842-01A 2 0 In-Frame Inter-chr q35 Tumor suppressor gene q13.2 25390 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128841404 - RSPO3 chr6 127469793 + Exonic hg19 COAD TCGA-AA-3842-01A 2 0 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 25391 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-AA-3811-01A 5 0 Out-of-frame Inter-chr p22.1 25392 ChimerSeq STARFusion TCGA_RNA-Seq RNA5SP92-EEF1A1 RNA5SP92 chr2 33558018 + EEF1A1 chr6 74229184 - Exonic hg19 COAD TCGA-AA-3811-01A 4 0 Out-of-frame Inter-chr p22.3 q13 Tumor suppressor gene 25393 ChimerSeq STARFusion TCGA_RNA-Seq HCG4P3-ZNF536 HCG4P3 chr6 29974382 - ZNF536 chr19 31039209 + Exonic hg19 COAD TCGA-AA-3811-01A 3 0 Out-of-frame Inter-chr q12 Transcription factor 25394 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-HSPA1A ZBTB12 chr6 31868874 - HSPA1A chr6 31784320 + Exonic hg19 COAD TCGA-AA-3811-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 25395 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 COAD TCGA-AA-3811-01A 3 0 Out-of-frame Inter-chr p13.13 q13.1 25396 ChimerSeq STARFusion TCGA_RNA-Seq FUCA1-TCEA3 FUCA1 chr1 24180850 - TCEA3 chr1 23744502 - Exonic hg19 COAD TCGA-F4-6570-01A 11 49 In-Frame Intra-chr p36.11 Seq+ 25397 ChimerSeq STARFusion TCGA_RNA-Seq RSPO1-PYGB RSPO1 chr1 38077363 - PYGB chr20 25277090 + Exonic hg19 COAD TCGA-AA-3976-01A 3 0 Out-of-frame Inter-chr p34.3 p11.21 25398 ChimerSeq STARFusion TCGA_RNA-Seq UBXN11-IGKC UBXN11 chr1 26607797 - IGKC chr2 89156892 - Exonic hg19 COAD TCGA-AA-3861-01A 3 0 Out-of-frame Inter-chr p36.11 p11.2 25399 ChimerSeq STARFusion TCGA_RNA-Seq ENO1-UTS2 ENO1 chr1 8922946 - UTS2 chr1 7913565 - Exonic hg19 COAD TCGA-AA-3667-01A 7 0 CDS-5'UTR Intra-chr p36.23 p36.23 25400 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-AA-3667-01A 3 0 Out-of-frame Inter-chr p22.1 25401 ChimerSeq STARFusion TCGA_RNA-Seq EDARADD-UTS2 EDARADD chr1 236647700 + UTS2 chr1 7913564 - Exonic hg19 COAD TCGA-AA-3667-01A 3 0 Out-of-frame Intra-chr q42.3 p36.23 25402 ChimerSeq STARFusion TCGA_RNA-Seq B2M-SORD B2M chr15 45003811 + SORD chr15 45332606 + Exonic hg19 COAD TCGA-QL-A97D-01A 4 113 Out-of-frame Intra-chr Oncogene q21.1 25403 ChimerSeq STARFusion TCGA_RNA-Seq CMIP-UBE2G1 CMIP chr16 81479146 + UBE2G1 chr17 4210418 - Exonic hg19 COAD TCGA-QL-A97D-01A 2 6 Out-of-frame Inter-chr q23.2 p13.2 Seq+ 25404 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3-KLK6 PRSS3 chr9 33798620 + KLK6 chr19 51462572 - Exonic hg19 COAD TCGA-CM-6171-01A 5 2 In-Frame Inter-chr p13.3 q13.41 Tumor suppressor gene 25405 ChimerSeq STARFusion TCGA_RNA-Seq SMAD3-IQCH SMAD3 chr15 67462942 + IQCH chr15 67649683 + Exonic hg19 COAD TCGA-AA-3489-01A 4 14 In-Frame Intra-chr q22.33 Transcription factor q23 25406 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-ELK2AP GAS6 chr13 114525072 - ELK2AP chr14 106136184 - Exonic hg19 COAD TCGA-AA-3489-01A 7 0 Out-of-frame Inter-chr q34 Oncogene 25407 ChimerSeq STARFusion TCGA_RNA-Seq YME1L1-GLYAT YME1L1 chr10 27420788 - GLYAT chr11 58491984 - Exonic hg19 COAD TCGA-AA-3860-01A 3 0 CDS-5'UTR Inter-chr p12.1 q12.1 25408 ChimerSeq STARFusion TCGA_RNA-Seq AGBL4-FAF1 AGBL4 chr1 50489435 - FAF1 chr1 51210447 - Exonic hg19 COAD TCGA-CK-4952-01A 2 16 In-Frame Intra-chr p33 p32.3 Seq+ 25409 ChimerSeq STARFusion TCGA_RNA-Seq CDS2-PCBP2 CDS2 chr20 5177910 + PCBP2 chr12 53873469 + Exonic hg19 COAD TCGA-AA-3530-01A 3 0 Out-of-frame Inter-chr p12.3 q13.13 25410 ChimerSeq STARFusion TCGA_RNA-Seq OXR1-MRPS28 OXR1 chr8 107696587 + MRPS28 chr8 80831383 - Exonic hg19 COAD TCGA-A6-3807-01A 14 0 Out-of-frame Intra-chr q23.1 q21.13 Seq+ 25411 ChimerSeq STARFusion TCGA_RNA-Seq USP7-PRKCB USP7 chr16 9057064 - PRKCB chr16 24043457 + Exonic hg19 COAD TCGA-A6-3807-01A 6 0 Out-of-frame Intra-chr p13.2 p12.2 Tumor suppressor gene Seq+ 25412 ChimerSeq STARFusion TCGA_RNA-Seq GPI-CACNA1G GPI chr19 34868483 + CACNA1G chr17 48653386 + Exonic hg19 COAD TCGA-A6-3807-01A 5 0 Out-of-frame Inter-chr q21.33 25413 ChimerSeq STARFusion TCGA_RNA-Seq EEF1G-SEZ6L EEF1G chr11 62334393 - SEZ6L chr22 26688199 + Exonic hg19 COAD TCGA-A6-3807-01A 3 0 Out-of-frame Inter-chr q12.3 q12.1 25414 ChimerSeq STARFusion TCGA_RNA-Seq LGALS3BP-HYPK LGALS3BP chr17 76968384 - HYPK chr15 44093721 + Exonic hg19 COAD TCGA-A6-3807-01A 3 0 Out-of-frame Inter-chr q25.3 q15.3 25415 ChimerSeq STARFusion TCGA_RNA-Seq LGALS3BP-SERF2 LGALS3BP chr17 76968384 - SERF2 chr15 44093721 + Exonic hg19 COAD TCGA-A6-3807-01A 3 0 Out-of-frame Inter-chr q25.3 q15.3 25416 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-AA-A00L-01A 5 0 Out-of-frame Inter-chr p22.1 25417 ChimerSeq STARFusion TCGA_RNA-Seq GART-CRYZL1 GART chr21 34900473 - CRYZL1 chr21 34962111 - Exonic hg19 COAD TCGA-AA-A00L-01A 4 0 CDS-3'UTR Intra-chr q22.11 25418 ChimerSeq STARFusion TCGA_RNA-Seq RNA5SP92-EEF1A1 RNA5SP92 chr2 33558018 + EEF1A1 chr6 74229184 - Exonic hg19 COAD TCGA-AA-A00L-01A 4 0 Out-of-frame Inter-chr p22.3 q13 Tumor suppressor gene 25419 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31831073 - Exonic hg19 COAD TCGA-AA-A00L-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 25420 ChimerSeq STARFusion TCGA_RNA-Seq AIF1L-RPL13AP7 AIF1L chr9 133995770 + RPL13AP7 chr21 26734505 + Exonic hg19 COAD TCGA-AA-A00L-01A 3 0 Out-of-frame Inter-chr q34.12 q21.2 25421 ChimerSeq STARFusion TCGA_RNA-Seq GART-CRYZL1 GART chr21 34900473 - CRYZL1 chr21 34962227 - Exonic hg19 COAD TCGA-AA-A00L-01A 3 0 Out-of-frame Intra-chr q22.11 25422 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 COAD TCGA-AA-A00L-01A 3 0 Out-of-frame Inter-chr p13.13 q13.1 25423 ChimerSeq STARFusion TCGA_RNA-Seq TCF7L2-GRK5 TCF7L2 chr10 114724383 + GRK5 chr10 121207635 + Exonic hg19 COAD TCGA-AA-3837-01A 2 0 In-Frame Intra-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q26.11 25424 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-UBE2D2 MATR3 chr5 138629494 + UBE2D2 chr5 138979957 + Exonic hg19 COAD TCGA-A6-2681-01A 17 0 5'UTR-5'UTR Intra-chr q31.2 q31.2 Seq+ 25425 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-UBE2D2 MATR3 chr5 138629717 + UBE2D2 chr5 138979957 + Exonic hg19 COAD TCGA-A6-2681-01A 4 0 In-Frame Intra-chr q31.2 q31.2 Seq+ 25426 ChimerSeq STARFusion TCGA_RNA-Seq MYRF-OTUB1 MYRF chr11 61520262 + OTUB1 chr11 63755809 + Exonic hg19 COAD TCGA-A6-2681-01A 4 0 Out-of-frame Intra-chr q12.2 Transcription factor q13.1 25427 ChimerSeq STARFusion TCGA_RNA-Seq LAD1-C1orf180 LAD1 chr1 201350998 - C1orf180 chr1 85096487 - Exonic hg19 COAD TCGA-AA-A017-01A 3 0 Out-of-frame Intra-chr q32.1 25428 ChimerSeq STARFusion TCGA_RNA-Seq C6orf141-ZNF529 C6orf141 chr6 49522870 + ZNF529 chr19 37073608 - Exonic hg19 COAD TCGA-AA-3941-01A 3 0 Out-of-frame Inter-chr p12.3 q13.12 Transcription factor 25429 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPL15 ZSWIM4 chr19 13942623 + RPL15 chr3 23960907 + Exonic hg19 COAD TCGA-AA-3941-01A 3 0 Out-of-frame Inter-chr p13.13 p24.2 25430 ChimerSeq STARFusion TCGA_RNA-Seq KCNQ1-GALNTL6 KCNQ1 chr11 2799267 + GALNTL6 chr4 173930329 + Exonic hg19 COAD TCGA-D5-5538-01A 10 36 In-Frame Inter-chr p15.5 q34.1 Seq+ 25431 ChimerSeq STARFusion TCGA_RNA-Seq DEAF1-TMEM80 DEAF1 chr11 686858 - TMEM80 chr11 700180 + Exonic hg19 COAD TCGA-D5-5538-01A 3 30 In-Frame Intra-chr Transcription factor p15.5 Seq+ 25432 ChimerSeq STARFusion TCGA_RNA-Seq DEAF1-TMEM80 DEAF1 chr11 686858 - TMEM80 chr11 700615 + Exonic hg19 COAD TCGA-D5-5538-01A 3 30 Out-of-frame Intra-chr Transcription factor p15.5 Seq+ 25433 ChimerSeq STARFusion TCGA_RNA-Seq LOC100133091-PTPN12 LOC100133091 chr7 76180839 + PTPN12 chr7 77200395 + Exonic hg19 COAD TCGA-D5-5538-01A 2 5 5'UTR-5'UTR Intra-chr q11.23 Tumor suppressor gene 25434 ChimerSeq STARFusion TCGA_RNA-Seq ADD3-MXI1 ADD3 chr10 111886261 + MXI1 chr10 112039672 + Exonic hg19 COAD TCGA-AA-3869-01A 12 0 In-Frame Intra-chr q25.1 q25.2 Tumor suppressor gene Transcription factor Seq+ 25435 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-MIEN1 FBXL20 chr17 37499433 - MIEN1 chr17 37886544 - Exonic hg19 COAD TCGA-AA-3869-01A 8 0 In-Frame Intra-chr q12 q12 Seq+ 25436 ChimerSeq STARFusion TCGA_RNA-Seq PSMD3-CDK12 PSMD3 chr17 38146450 + CDK12 chr17 37627132 + Exonic hg19 COAD TCGA-AA-3869-01A 4 0 Out-of-frame Intra-chr q21.1 q12 Oncogene Seq+ 25437 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL671P-HCG4P7 RN7SL671P chr4 1870886 - HCG4P7 chr6 29855588 - Exonic hg19 COAD TCGA-AA-3869-01A 3 0 Out-of-frame Inter-chr 25438 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-AA-3525-01A 5 0 Out-of-frame Inter-chr p22.1 25439 ChimerSeq STARFusion TCGA_RNA-Seq HCG4P3-ZNF536 HCG4P3 chr6 29974382 - ZNF536 chr19 31039209 + Exonic hg19 COAD TCGA-AA-3525-01A 5 0 Out-of-frame Inter-chr q12 Transcription factor 25440 ChimerSeq STARFusion TCGA_RNA-Seq RNA5SP92-EEF1A1 RNA5SP92 chr2 33558018 + EEF1A1 chr6 74229184 - Exonic hg19 COAD TCGA-AA-3525-01A 4 0 Out-of-frame Inter-chr p22.3 q13 Tumor suppressor gene 25441 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31831073 - Exonic hg19 COAD TCGA-AA-3525-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 25442 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31832512 - Exonic hg19 COAD TCGA-AA-3525-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 25443 ChimerSeq STARFusion TCGA_RNA-Seq GPX1P1-SP8 GPX1P1 chrX 13397444 - SP8 chr7 20824974 - Exonic hg19 COAD TCGA-AA-3525-01A 3 0 Out-of-frame Inter-chr p22.2 p21.1 Transcription factor 25444 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-TYRO3 IGKC chr2 89156966 - TYRO3 chr15 41854865 + Exonic hg19 COAD TCGA-AA-3525-01A 3 0 Out-of-frame Inter-chr p11.2 q15.1 TK:Axl 25445 ChimerSeq STARFusion TCGA_RNA-Seq RPS29-ETV5 RPS29 chr14 50050360 - ETV5 chr3 185826703 - Exonic hg19 COAD TCGA-AA-3525-01A 3 0 Out-of-frame Inter-chr q21.3 q27.2 Oncogene Transcription factor 25446 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-EEF1A1 ZSWIM4 chr19 13942623 + EEF1A1 chr6 74229229 - Exonic hg19 COAD TCGA-AA-3525-01A 3 0 Out-of-frame Inter-chr p13.13 q13 Tumor suppressor gene 25447 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-EPB41L2 PTPRK chr6 128841404 - EPB41L2 chr6 131191266 - Exonic hg19 COAD TCGA-CM-6164-01A 8 56 Out-of-frame Intra-chr Tumor suppressor gene q23.2 Seq+ 25448 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-EPB41L2 PTPRK chr6 128841404 - EPB41L2 chr6 131184858 - Exonic hg19 COAD TCGA-CM-6164-01A 5 56 Out-of-frame Intra-chr Tumor suppressor gene q23.2 Seq+ 25449 ChimerSeq STARFusion TCGA_RNA-Seq KIF16B-SNX5 KIF16B chr20 16506737 - SNX5 chr20 17923839 - Exonic hg19 COAD TCGA-CM-6164-01A 7 14 Out-of-frame Intra-chr p12.1 p11.23 Seq+ 25450 ChimerSeq STARFusion TCGA_RNA-Seq SHANK2-LOC100507412 SHANK2 chr11 70935743 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 COAD TCGA-DM-A1D8-01A 34 183 5'UTR-5'UTR Inter-chr q13.4 25451 ChimerSeq STARFusion TCGA_RNA-Seq FAT1-LOC285441 FAT1 chr4 187554838 - LOC285441 chr4 187348252 - Exonic hg19 COAD TCGA-DM-A1D8-01A 7 90 CDS-3'UTR Intra-chr q35.2 Tumor suppressor gene 25452 ChimerSeq STARFusion TCGA_RNA-Seq FAT1-LOC285441 FAT1 chr4 187554838 - LOC285441 chr4 187337490 - Exonic hg19 COAD TCGA-DM-A1D8-01A 3 90 CDS-3'UTR Intra-chr q35.2 Tumor suppressor gene 25453 ChimerSeq STARFusion TCGA_RNA-Seq PTPRF-ARTN PTPRF chr1 44058272 + ARTN chr1 44401327 + Exonic hg19 COAD TCGA-DM-A1D8-01A 7 37 CDS-5'UTR Intra-chr p34.2 p34.1 Seq+ 25454 ChimerSeq STARFusion TCGA_RNA-Seq PTPRF-ARTN PTPRF chr1 44058272 + ARTN chr1 44401262 + Exonic hg19 COAD TCGA-DM-A1D8-01A 4 37 CDS-5'UTR Intra-chr p34.2 p34.1 Seq+ 25455 ChimerSeq STARFusion TCGA_RNA-Seq SND1-ARF5 SND1 chr7 127334962 + ARF5 chr7 127228458 + Exonic hg19 COAD TCGA-DM-A1D8-01A 3 14 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 25456 ChimerSeq STARFusion TCGA_RNA-Seq ELL2-CAST ELL2 chr5 95278706 - CAST chr5 96011243 + Exonic hg19 COAD TCGA-DM-A1D8-01A 3 9 In-Frame Intra-chr q15 q15 Seq+ 25457 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 COAD TCGA-CM-4743-01A 5 20 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 25458 ChimerSeq STARFusion TCGA_RNA-Seq LPCAT2-DNAJA2 LPCAT2 chr16 55543264 + DNAJA2 chr16 46991132 - Exonic hg19 COAD TCGA-CM-4743-01A 4 4 In-Frame Intra-chr q12.2 q11.2 Seq+ 25459 ChimerSeq STARFusion TCGA_RNA-Seq S100A16-RPL14 S100A16 chr1 153579646 - RPL14 chr3 40503537 + Exonic hg19 COAD TCGA-CM-4743-01A 3 0 Out-of-frame Inter-chr q21.3 p22.1 25460 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D16-LOC441242 TBC1D16 chr17 77983959 - LOC441242 chr7 65114462 - Exonic hg19 COAD TCGA-CA-6715-01A 9 6 CDS-3'UTR Inter-chr q25.3 25461 ChimerSeq STARFusion TCGA_RNA-Seq HOOK3-TGS1 HOOK3 chr8 42761401 + TGS1 chr8 56695307 + Exonic hg19 COAD TCGA-CA-6715-01A 5 11 In-Frame Intra-chr p11.21 Oncogene q12.1 Tumor suppressor gene Seq+ 25462 ChimerSeq STARFusion TCGA_RNA-Seq PITPNM2-PGD PITPNM2 chr12 123594932 - PGD chr1 10459686 + Exonic hg19 COAD TCGA-A6-5664-01A 2 5 5'UTR-CDS Inter-chr q24.31 p36.22 Seq+ 25463 ChimerSeq STARFusion TCGA_RNA-Seq ACE2-GPR143 ACE2 chrX 15596212 - GPR143 chrX 9693880 - Exonic hg19 COAD TCGA-AZ-6605-01A 31 142 In-Frame Intra-chr p22.2 p22.2 Seq+ 25464 ChimerSeq STARFusion TCGA_RNA-Seq MC5R-REG1B MC5R chr18 13826785 + REG1B chr2 79312356 - Exonic hg19 COAD TCGA-AA-3549-01A 4 0 Out-of-frame Inter-chr p11.21 p12 25465 ChimerSeq STARFusion TCGA_RNA-Seq RPL13A-CERS5 RPL13A chr19 49993176 + CERS5 chr12 50561199 - Exonic hg19 COAD TCGA-AA-3549-01A 4 0 Out-of-frame Inter-chr q13.33 q13.12 25466 ChimerSeq STARFusion TCGA_RNA-Seq ST14-APLP2 ST14 chr11 130060589 + APLP2 chr11 129996595 + Exonic hg19 COAD TCGA-AA-3549-01A 4 0 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 25467 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 COAD TCGA-AA-3549-01A 4 0 Out-of-frame Inter-chr p13.13 q13.1 25468 ChimerSeq STARFusion TCGA_RNA-Seq INSM1-PABPC1 INSM1 chr20 20349019 + PABPC1 chr8 101719188 - Exonic hg19 COAD TCGA-AA-3549-01A 3 0 Out-of-frame Inter-chr p11.23 Transcription factor q22.3 25469 ChimerSeq STARFusion TCGA_RNA-Seq MBD2-C18orf42 MBD2 chr18 51750388 - C18orf42 chr18 5145754 - Exonic hg19 COAD TCGA-G4-6314-01A 7 18 Out-of-frame Intra-chr q21.2 Transcription factor Seq+ 25470 ChimerSeq STARFusion TCGA_RNA-Seq ATF7IP2-HERC2P4 ATF7IP2 chr16 10551386 + HERC2P4 chr16 32198426 - Exonic hg19 COAD TCGA-G4-6314-01A 2 6 CDS-5'UTR Intra-chr p13.2 p11.2 25471 ChimerSeq STARFusion TCGA_RNA-Seq SAMD4B-SPTBN4 SAMD4B chr19 39839029 + SPTBN4 chr19 41078244 + Exonic hg19 COAD TCGA-AM-5820-01A 7 80 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 25472 ChimerSeq STARFusion TCGA_RNA-Seq ARID5A-CNNM4 ARID5A chr2 97202567 + CNNM4 chr2 97462749 + Exonic hg19 COAD TCGA-AM-5820-01A 9 21 In-Frame Intra-chr q11.2 Transcription factor q11.2 Seq+ 25473 ChimerSeq STARFusion TCGA_RNA-Seq CHCHD3-ITPKA CHCHD3 chr7 132659929 - ITPKA chr15 41794600 + Exonic hg19 COAD TCGA-AM-5820-01A 3 31 In-Frame Inter-chr q33 Transcription factor q15.1 Seq+ 25474 ChimerSeq STARFusion TCGA_RNA-Seq APMAP-KHDRBS2 APMAP chr20 24973230 - KHDRBS2 chr6 62442669 - Exonic hg19 COAD TCGA-AM-5820-01A 3 1 Out-of-frame Inter-chr p11.21 q11.1 25475 ChimerSeq STARFusion TCGA_RNA-Seq NUDC-MICU1 NUDC chr1 27250657 + MICU1 chr10 74183129 - Exonic hg19 COAD TCGA-AA-3858-01A 25 0 In-Frame Inter-chr p36.11 q22.1 Seq+ 25476 ChimerSeq STARFusion TCGA_RNA-Seq UBXN11-ZNF683 UBXN11 chr1 26623410 - ZNF683 chr1 26689645 - Exonic hg19 COAD TCGA-AA-3858-01A 11 0 In-Frame Intra-chr p36.11 p36.11 Transcription factor 25477 ChimerSeq STARFusion TCGA_RNA-Seq ABR-YWHAE ABR chr17 1132087 - YWHAE chr17 1268352 - Exonic hg19 COAD TCGA-A6-2686-01A 2 10 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 25478 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L2-STAT3 EPB41L2 chr6 131384295 - STAT3 chr17 40474512 - Exonic hg19 COAD TCGA-G4-6317-02A 17 69 5'UTR-CDS Inter-chr q23.2 q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 25479 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L2-STAT3 EPB41L2 chr6 131384295 - STAT3 chr17 40469242 - Exonic hg19 COAD TCGA-G4-6317-02A 2 69 5'UTR-CDS Inter-chr q23.2 q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 25480 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L2-STAT3 EPB41L2 chr6 131384282 - STAT3 chr17 40474512 - Exonic hg19 COAD TCGA-G4-6317-02A 2 69 5'UTR-CDS Inter-chr q23.2 q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 25481 ChimerSeq STARFusion TCGA_RNA-Seq NDUFAF6-FAM92A1 NDUFAF6 chr8 95970407 + FAM92A1 chr8 94738622 + Exonic hg19 COAD TCGA-G4-6311-01A 5 15 Out-of-frame Intra-chr q22.1 25482 ChimerSeq STARFusion TCGA_RNA-Seq NCEH1-EEF1G NCEH1 chr3 172428637 - EEF1G chr11 62327309 - Exonic hg19 COAD TCGA-G4-6323-01A 8 54 In-Frame Inter-chr q26.31 q12.3 Seq+ 25483 ChimerSeq STARFusion TCGA_RNA-Seq NCEH1-MIR3654 NCEH1 chr3 172428637 - MIR3654 chr11 62327309 - Exonic hg19 COAD TCGA-G4-6323-01A 8 54 CDS-3'UTR Inter-chr q26.31 q33 25484 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106054734 - Exonic hg19 COAD TCGA-G4-6323-01A 4 1 Out-of-frame Inter-chr q24.2 32.33 25485 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHA2 SLC7A5 chr16 87868137 - IGHA2 chr14 106054734 - Exonic hg19 COAD TCGA-G4-6323-01A 4 1 Out-of-frame Inter-chr q24.2 25486 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ITGB4 IGH@ chr14 106667789 - ITGB4 chr17 73724480 + Exonic hg19 COAD TCGA-G4-6323-01A 3 4 Out-of-frame Inter-chr 32.33 q25.1 25487 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-FLJ44635 TPT1 chr13 45911405 - FLJ44635 chrX 71380315 + Exonic hg19 COAD TCGA-AD-6889-01A 19 31 Out-of-frame Inter-chr q14.13 25488 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-FLJ44635 TPT1 chr13 45911393 - FLJ44635 chrX 71380327 + Exonic hg19 COAD TCGA-AD-6889-01A 13 31 Out-of-frame Inter-chr q14.13 25489 ChimerSeq STARFusion TCGA_RNA-Seq RPL12-GAS5 RPL12 chr9 130211560 - GAS5 chr1 173833842 - Exonic hg19 COAD TCGA-AD-6889-01A 2 1 CDS-3'UTR Inter-chr q33.3 q25.1 Tumor suppressor gene 25490 ChimerSeq STARFusion TCGA_RNA-Seq BTBD1-MRFAP1L1 BTBD1 chr15 83686114 - MRFAP1L1 chr4 6711505 - Exonic hg19 COAD TCGA-A6-3809-01A 3 0 Out-of-frame Inter-chr q25.2 p16.1 25491 ChimerSeq STARFusion TCGA_RNA-Seq CTSA-ASPSCR1 CTSA chr20 44520260 + ASPSCR1 chr17 79972719 + Exonic hg19 COAD TCGA-A6-3809-01A 3 0 Out-of-frame Inter-chr q13.12 q25.3 25492 ChimerSeq STARFusion TCGA_RNA-Seq GPI-GTF3C1 GPI chr19 34868491 + GTF3C1 chr16 27472239 - Exonic hg19 COAD TCGA-A6-3809-01A 3 0 CDS-3'UTR Inter-chr p12.1 25493 ChimerSeq STARFusion TCGA_RNA-Seq CHD7-TCF7L2 CHD7 chr8 61655656 + TCF7L2 chr10 114900943 + Exonic hg19 COAD TCGA-F4-6807-01A 15 72 In-Frame Inter-chr q12.2 q25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 25494 ChimerSeq STARFusion TCGA_RNA-Seq TCF7L2-CHD7 TCF7L2 chr10 114799885 + CHD7 chr8 61693559 + Exonic hg19 COAD TCGA-F4-6807-01A 3 15 In-Frame Inter-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q12.2 Seq+ 25495 ChimerSeq STARFusion TCGA_RNA-Seq HERC2-SLC12A2 HERC2 chr15 28525214 - SLC12A2 chr5 127524635 + Exonic hg19 COAD TCGA-A6-5656-01A 6 28 CDS-5'UTR Inter-chr q23.3 Seq+ 25496 ChimerSeq STARFusion TCGA_RNA-Seq DYNC1H1-RNA45S5 DYNC1H1 chr14 102452719 + RNA45S5 chrUn_gl000220 114052 + Exonic hg19 COAD TCGA-A6-5656-01A 3 1 Out-of-frame Inter-chr q32.31 25497 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-AA-3855-01A 6 0 Out-of-frame Inter-chr p22.1 25498 ChimerSeq STARFusion TCGA_RNA-Seq LGALS3-TRAPPC9 LGALS3 chr14 55609467 + TRAPPC9 chr8 141415767 - Exonic hg19 COAD TCGA-AA-3855-01A 4 0 Out-of-frame Inter-chr q22.3 q24.3 25499 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31831073 - Exonic hg19 COAD TCGA-AA-3855-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 25500 ChimerSeq STARFusion TCGA_RNA-Seq VTI1A-TCF7L2 VTI1A chr10 114224416 + TCF7L2 chr10 114900943 + Exonic hg19 COAD TCGA-AD-6963-01A 4 5 In-Frame Intra-chr q25.2 q25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 25501 ChimerSeq STARFusion TCGA_RNA-Seq LYN-VPS13B LYN chr8 56792662 + VPS13B chr8 100513915 + Exonic hg19 COAD TCGA-A6-5666-01A 3 6 5'UTR-CDS Intra-chr q12.1 TK:Src q22.2 Seq+ 25502 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010573 - TTC18 chr10 75016174 - Exonic hg19 COAD TCGA-AA-A00K-01A 17 0 3'UTR-CDS Intra-chr q22.2 25503 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010681 - TTC18 chr10 75016173 - Exonic hg19 COAD TCGA-AA-A00K-01A 13 0 Out-of-frame Intra-chr q22.2 25504 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010596 - TTC18 chr10 75016174 - Exonic hg19 COAD TCGA-AA-A00K-01A 9 0 3'UTR-CDS Intra-chr q22.2 25505 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75011521 - TTC18 chr10 75016174 - Exonic hg19 COAD TCGA-AA-A00K-01A 6 0 Out-of-frame Intra-chr q22.2 25506 ChimerSeq STARFusion TCGA_RNA-Seq EDF1-FAM159B EDF1 chr9 139757358 - FAM159B chr5 63986324 + Exonic hg19 COAD TCGA-AA-A00K-01A 4 0 CDS-5'UTR Inter-chr q34.3 q12.3 25507 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 COAD TCGA-AA-A00K-01A 4 0 Out-of-frame Inter-chr q13.33 p21.1 25508 ChimerSeq STARFusion TCGA_RNA-Seq LGALS4-DLGAP1 LGALS4 chr19 39297110 - DLGAP1 chr18 3499034 - Exonic hg19 COAD TCGA-AA-A00K-01A 4 0 Out-of-frame Inter-chr p11.31 25509 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-AA-A00K-01A 3 0 Out-of-frame Inter-chr p22.1 25510 ChimerSeq STARFusion TCGA_RNA-Seq HEPHL1-PANX1 HEPHL1 chr11 93800911 + PANX1 chr11 93862496 + Exonic hg19 COAD TCGA-AA-A00K-01A 3 0 Out-of-frame Intra-chr q21 q21 25511 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010567 - TTC18 chr10 75016174 - Exonic hg19 COAD TCGA-AA-A00K-01A 3 0 3'UTR-CDS Intra-chr q22.2 25512 ChimerSeq STARFusion TCGA_RNA-Seq TAB3-DMD TAB3 chrX 30877604 - DMD chrX 31165635 - Exonic hg19 COAD TCGA-AA-3678-01A 20 0 Out-of-frame Intra-chr p21.2 p21.1 Tumor suppressor gene Seq+ 25513 ChimerSeq STARFusion TCGA_RNA-Seq ACTG1-HCG18 ACTG1 chr17 79478380 - HCG18 chr6 30256988 - Exonic hg19 COAD TCGA-AA-3678-01A 5 0 Out-of-frame Inter-chr q25.3 25514 ChimerSeq STARFusion TCGA_RNA-Seq TNPO3-AHCYL2 TNPO3 chr7 128694705 - AHCYL2 chr7 129019482 + Exonic hg19 COAD TCGA-CM-4747-01A 13 43 In-Frame Intra-chr q32.1 q32.1 Seq+ 25515 ChimerSeq STARFusion TCGA_RNA-Seq TNPO3-AHCYL2 TNPO3 chr7 128694705 - AHCYL2 chr7 129019479 + Exonic hg19 COAD TCGA-CM-4747-01A 2 43 In-Frame Intra-chr q32.1 q32.1 Seq+ 25516 ChimerSeq STARFusion TCGA_RNA-Seq FAM172A-PRR16 FAM172A chr5 93294482 - PRR16 chr5 120021649 + Exonic hg19 COAD TCGA-CM-4747-01A 8 13 In-Frame Intra-chr q15 Tumor suppressor gene q23.1 Seq+ 25517 ChimerSeq STARFusion TCGA_RNA-Seq FRYL-CORIN FRYL chr4 48572844 - CORIN chr4 47628538 - Exonic hg19 COAD TCGA-F4-6461-01A 5 38 In-Frame Intra-chr p11 p12 Seq+ 25518 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P2-KPNB1 PRSS3P2 chr7 142481380 + KPNB1 chr17 45727448 + Exonic hg19 COAD TCGA-F4-6461-01A 7 1 5'UTR-5'UTR Inter-chr q21.32 25519 ChimerSeq STARFusion TCGA_RNA-Seq DHX8-PPY DHX8 chr17 41561553 + PPY chr17 42018582 - Exonic hg19 COAD TCGA-F4-6461-01A 3 6 Out-of-frame Intra-chr q21.31 q21.31 Seq+ 25520 ChimerSeq STARFusion TCGA_RNA-Seq CWC25-LASP1 CWC25 chr17 36971114 - LASP1 chr17 37074858 + Exonic hg19 COAD TCGA-AA-A02K-01A 17 86 Out-of-frame Intra-chr q12 q12 Seq+ 25521 ChimerSeq STARFusion TCGA_RNA-Seq CDK12-CACNB1 CDK12 chr17 37646986 + CACNB1 chr17 37347846 - Exonic hg19 COAD TCGA-AA-A02K-01A 8 20 Out-of-frame Intra-chr q12 Oncogene q12 Seq+ 25522 ChimerSeq STARFusion TCGA_RNA-Seq TTC17-API5 TTC17 chr11 43380663 + API5 chr11 43340190 + Exonic hg19 COAD TCGA-AA-A02K-01A 4 11 In-Frame Intra-chr p12 p12 Seq+ 25523 ChimerSeq STARFusion TCGA_RNA-Seq PHIP-HMGN3 PHIP chr6 79752560 - HMGN3 chr6 79924739 - Exonic hg19 COAD TCGA-AA-A02K-01A 2 3 In-Frame Intra-chr q14.1 q14.1 Transcription factor Seq+ 25524 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 COAD TCGA-AA-3538-01A 7 0 Out-of-frame Inter-chr q13.33 p21.1 25525 ChimerSeq STARFusion TCGA_RNA-Seq FTLP15-MAP3K15 FTLP15 chr7 46037210 - MAP3K15 chrX 19533151 - Exonic hg19 COAD TCGA-AA-3538-01A 4 0 Out-of-frame Inter-chr p12.3 p22.12 25526 ChimerSeq STARFusion TCGA_RNA-Seq GSTP1-HS3ST6 GSTP1 chr11 67351640 + HS3ST6 chr16 1968156 - Exonic hg19 COAD TCGA-AA-3538-01A 4 0 Out-of-frame Inter-chr q13.2 Tumor suppressor gene 25527 ChimerSeq STARFusion TCGA_RNA-Seq KANK1-DOCK8 KANK1 chr9 677009 + DOCK8 chr9 304581 + Exonic hg19 COAD TCGA-CA-6716-01A 8 20 Out-of-frame Intra-chr p24.3 Tumor suppressor gene p24.3 Seq+ 25528 ChimerSeq STARFusion TCGA_RNA-Seq RNF213-SLC26A11 RNF213 chr17 78324196 + SLC26A11 chr17 78225128 + Exonic hg19 COAD TCGA-CA-6716-01A 4 13 Out-of-frame Intra-chr q25.3 Oncogene q25.3 Pub Seq+ 25529 ChimerSeq STARFusion TCGA_RNA-Seq KPNA3-DLEU2 KPNA3 chr13 50279757 - DLEU2 chr13 50571555 - Exonic hg19 COAD TCGA-CA-6716-01A 3 5 CDS-3'UTR Intra-chr q14.2 q14.2 Tumor suppressor gene Seq+ 25530 ChimerSeq STARFusion TCGA_RNA-Seq PLCXD1-IGHG2 PLCXD1 chrX 209756 + IGHG2 chr14 106111129 - Exonic hg19 COAD TCGA-AA-3534-01A 3 0 Out-of-frame Inter-chr p22.33 25531 ChimerSeq STARFusion TCGA_RNA-Seq RPS19BP1-KCNQ4 RPS19BP1 chr22 39928700 - KCNQ4 chr1 41249768 + Exonic hg19 COAD TCGA-AA-3534-01A 3 0 Out-of-frame Inter-chr q13.1 p34.2 25532 ChimerSeq STARFusion TCGA_RNA-Seq OTUD5-TEX101 OTUD5 chrX 48783123 - TEX101 chr19 43906918 + Exonic hg19 COAD TCGA-NH-A6GA-01A 2 0 CDS-5'UTR Inter-chr p11.23 q13.31 25533 ChimerSeq STARFusion TCGA_RNA-Seq HEPHL1-PANX1 HEPHL1 chr11 93800909 + PANX1 chr11 93862494 + Exonic hg19 COAD TCGA-AA-3522-01A 4 0 Out-of-frame Intra-chr q21 q21 25534 ChimerSeq STARFusion TCGA_RNA-Seq RPS19BP1-KCNQ4 RPS19BP1 chr22 39928700 - KCNQ4 chr1 41249768 + Exonic hg19 COAD TCGA-AA-3522-01A 3 0 Out-of-frame Inter-chr q13.1 p34.2 25535 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128841404 - RSPO3 chr6 127469793 + Exonic hg19 COAD TCGA-AA-3664-01A 8 0 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 25536 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K4-PACRG MAP3K4 chr6 161413115 + PACRG chr6 163735859 + Exonic hg19 COAD TCGA-AA-3664-01A 3 0 Out-of-frame Intra-chr q26 STE:STE11 Tumor suppressor gene q26 Tumor suppressor gene 25537 ChimerSeq STARFusion TCGA_RNA-Seq RAMP1-RBM44 RAMP1 chr2 238768370 + RBM44 chr2 238722235 + Exonic hg19 COAD TCGA-NH-A5IV-01A 7 26 CDS-5'UTR Intra-chr q37.3 q37.3 Seq+ 25538 ChimerSeq STARFusion TCGA_RNA-Seq RAMP1-LRRFIP1 RAMP1 chr2 238768370 + LRRFIP1 chr2 238722235 + Exonic hg19 COAD TCGA-NH-A5IV-01A 7 19 CDS-3'UTR Intra-chr q37.3 q37.3 25539 ChimerSeq STARFusion TCGA_RNA-Seq KIF3B-TOX2 KIF3B chr20 30898984 + TOX2 chr20 42602007 + Exonic hg19 COAD TCGA-G4-6625-01A 5 8 In-Frame Intra-chr q11.21 q13.12 Seq+ 25540 ChimerSeq STARFusion TCGA_RNA-Seq ACSL5-ATE1 ACSL5 chr10 114158767 + ATE1 chr10 123549804 - Exonic hg19 COAD TCGA-G4-6625-01A 2 6 Out-of-frame Intra-chr q25.2 q26.13 Seq+ 25541 ChimerSeq STARFusion TCGA_RNA-Seq MIB1-MYO5B MIB1 chr18 19438607 + MYO5B chr18 47406825 - Exonic hg19 COAD TCGA-G4-6322-01A 14 45 In-Frame Intra-chr q11.2 q21.1 Seq+ 25542 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHG1-CCDC170 PLEKHG1 chr6 150971922 + CCDC170 chr6 151857453 + Exonic hg19 COAD TCGA-G4-6322-01A 4 4 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 25543 ChimerSeq STARFusion TCGA_RNA-Seq ZFP91-GLYATL1 ZFP91 chr11 58352357 + GLYATL1 chr11 58711016 + Exonic hg19 COAD TCGA-G4-6322-01A 2 4 Out-of-frame Intra-chr q12.1 Transcription factor q12.1 25544 ChimerSeq STARFusion TCGA_RNA-Seq ETHE1-POU2F2 ETHE1 chr19 44031249 - POU2F2 chr19 42600395 - Exonic hg19 COAD TCGA-G4-6322-01A 2 3 In-Frame Intra-chr q13.31 q13.2 Transcription factor Seq+ 25545 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC7-TBCD DNAJC7 chr17 40169358 - TBCD chr17 80869634 + Exonic hg19 COAD TCGA-AA-A01Z-01A 23 193 In-Frame Intra-chr q21.2 Seq+ 25546 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC7-TBCD DNAJC7 chr17 40169358 - TBCD chr17 80867161 + Exonic hg19 COAD TCGA-AA-A01Z-01A 4 193 Out-of-frame Intra-chr q21.2 Seq+ 25547 ChimerSeq STARFusion TCGA_RNA-Seq TRIM2-MND1 TRIM2 chr4 154125712 + MND1 chr4 154271216 + Exonic hg19 COAD TCGA-AA-A01Z-01A 2 41 In-Frame Intra-chr q31.3 q31.3 25548 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-TRIM37 FAM222B chr17 27169700 - TRIM37 chr17 57168701 - Exonic hg19 COAD TCGA-AA-A01Z-01A 3 8 5'UTR-CDS Intra-chr q11.2 q22 25549 ChimerSeq STARFusion TCGA_RNA-Seq NEO1-NPTN NEO1 chr15 73418911 + NPTN chr15 73866136 - Exonic hg19 COAD TCGA-AA-A01Z-01A 4 3 Out-of-frame Intra-chr q24.1 q24.1 25550 ChimerSeq STARFusion TCGA_RNA-Seq PYGB-CNBD2 PYGB chr20 25273249 + CNBD2 chr20 34575317 + Exonic hg19 COAD TCGA-AA-3660-01A 78 354 Out-of-frame Intra-chr p11.21 q11.23 Seq+ 25551 ChimerSeq STARFusion TCGA_RNA-Seq GOLGA3-POLE GOLGA3 chr12 133374926 - POLE chr12 133257865 - Exonic hg19 COAD TCGA-AA-3660-01A 3 8 Out-of-frame Intra-chr q24.33 q24.33 25552 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80954854 - MRPS28 chr8 80831382 - Exonic hg19 COAD TCGA-AA-3660-01A 3 5 Out-of-frame Intra-chr q21.13 q21.13 25553 ChimerSeq STARFusion TCGA_RNA-Seq PRCC-RRNAD1 PRCC chr1 156738031 + RRNAD1 chr1 156705517 + Exonic hg19 COAD TCGA-AA-3979-01A 33 0 In-Frame Intra-chr q23.1 q23.1 Seq+ 25554 ChimerSeq STARFusion TCGA_RNA-Seq PRCC-RRNAD1 PRCC chr1 156738031 + RRNAD1 chr1 156706424 + Exonic hg19 COAD TCGA-AA-3979-01A 6 0 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 25555 ChimerSeq STARFusion TCGA_RNA-Seq PCNXL3-MAP3K11 PCNXL3 chr11 65397062 + MAP3K11 chr11 65375548 - Exonic hg19 COAD TCGA-AA-3979-01A 4 0 Out-of-frame Intra-chr q13.1 25556 ChimerSeq STARFusion TCGA_RNA-Seq WDHD1-DLGAP5 WDHD1 chr14 55493429 - DLGAP5 chr14 55637505 - Exonic hg19 COAD TCGA-AA-3979-01A 4 0 In-Frame Intra-chr q22.3 q22.3 Seq+ 25557 ChimerSeq STARFusion TCGA_RNA-Seq ARID5B-C10orf107 ARID5B chr10 63662172 + C10orf107 chr10 63525697 + Exonic hg19 COAD TCGA-AA-3979-01A 3 0 In-Frame Intra-chr q21.2 Transcription factor q21.2 25558 ChimerSeq STARFusion TCGA_RNA-Seq RPS27-FAM159B RPS27 chr1 153963699 + FAM159B chr5 63986324 + Exonic hg19 COAD TCGA-AA-3979-01A 3 0 3'UTR-5'UTR Inter-chr q21.3 q12.3 25559 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G1-NCOR2 EIF4G1 chr3 184052769 + NCOR2 chr12 124824735 - Exonic hg19 COAD TCGA-AA-A00J-01A 5 0 Out-of-frame Inter-chr q27.1 q24.31 25560 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31802758 + C2 chr6 31868874 + Exonic hg19 COAD TCGA-AA-A00J-01A 3 0 Out-of-frame Intra-chr p21.33 25561 ChimerSeq STARFusion TCGA_RNA-Seq ANKFY1-UBE2G1 ANKFY1 chr17 4167227 - UBE2G1 chr17 4210418 - Exonic hg19 COAD TCGA-AU-3779-01A 6 0 In-Frame Intra-chr p13.2 p13.2 Seq+ 25562 ChimerSeq STARFusion TCGA_RNA-Seq ASCL2-IGF2 ASCL2 chr11 2291272 - IGF2 chr11 2162297 - Exonic hg19 COAD TCGA-AA-3509-01A 207 663 Out-of-frame Intra-chr p15.5 Transcription factor p15.5 Oncogene 25563 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL671P-HCG4P7 RN7SL671P chr4 1870886 - HCG4P7 chr6 29855588 - Exonic hg19 COAD TCGA-A6-3810-01A 6 0 Out-of-frame Inter-chr 25564 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-A6-3810-01A 3 0 Out-of-frame Inter-chr p22.1 25565 ChimerSeq STARFusion TCGA_RNA-Seq HCG4P3-ZNF536 HCG4P3 chr6 29974382 - ZNF536 chr19 31039209 + Exonic hg19 COAD TCGA-A6-3810-01A 3 0 Out-of-frame Inter-chr q12 Transcription factor 25566 ChimerSeq STARFusion TCGA_RNA-Seq RNA5SP92-EEF1A1 RNA5SP92 chr2 33558018 + EEF1A1 chr6 74229184 - Exonic hg19 COAD TCGA-A6-3810-01A 3 0 Out-of-frame Inter-chr p22.3 q13 Tumor suppressor gene 25567 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-LSM2 ZBTB12 chr6 31868874 - LSM2 chr6 31765545 - Exonic hg19 COAD TCGA-A6-3810-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 25568 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128505577 - RSPO3 chr6 127469793 + Exonic hg19 COAD TCGA-DM-A1HB-01A 31 99 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 25569 ChimerSeq STARFusion TCGA_RNA-Seq CLK3-MUC2 CLK3 chr15 74907758 + MUC2 chr11 1092784 + Exonic hg19 COAD TCGA-AA-3819-01A 5 0 Out-of-frame Inter-chr q24.1 CMGC:CLK 25570 ChimerSeq STARFusion TCGA_RNA-Seq NF1-RNF135 NF1 chr17 29422387 + RNF135 chr17 29311635 + Exonic hg19 COAD TCGA-AA-3819-01A 5 0 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 25571 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-AA-3819-01A 4 0 Out-of-frame Inter-chr p22.1 25572 ChimerSeq STARFusion TCGA_RNA-Seq RNF43-HSF5 RNF43 chr17 56492690 - HSF5 chr17 56544343 - Exonic hg19 COAD TCGA-AA-3819-01A 4 0 Out-of-frame Intra-chr q22 Oncogene q22 Transcription factor Seq+ 25573 ChimerSeq STARFusion TCGA_RNA-Seq NAIP-IFI27 NAIP chr5 70281590 - IFI27 chr14 94582131 + Exonic hg19 COAD TCGA-A6-2683-01A 5 0 Out-of-frame Inter-chr q13.2 q32.12 25574 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-A6-2683-01A 4 0 Out-of-frame Inter-chr p22.1 25575 ChimerSeq STARFusion TCGA_RNA-Seq AIF1L-RPL13AP7 AIF1L chr9 133995770 + RPL13AP7 chr21 26734505 + Exonic hg19 COAD TCGA-A6-2683-01A 3 0 Out-of-frame Inter-chr q34.12 q21.2 25576 ChimerSeq STARFusion TCGA_RNA-Seq ATP5O-RYR3 ATP5O chr21 35286754 - RYR3 chr15 33905421 + Exonic hg19 COAD TCGA-A6-2683-01A 3 0 Out-of-frame Inter-chr q22.11 q13.3 25577 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHA2 GAS6 chr13 114525071 - IGHA2 chr14 106054733 - Exonic hg19 COAD TCGA-A6-2683-01A 3 0 Out-of-frame Inter-chr q34 Oncogene 25578 ChimerSeq STARFusion TCGA_RNA-Seq UBBP1-UBA52 UBBP1 chr2 137087041 - UBA52 chr19 18685694 + Exonic hg19 COAD TCGA-A6-2683-01A 3 0 Out-of-frame Inter-chr q22.1 p13.11 25579 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 COAD TCGA-A6-2683-01A 3 0 Out-of-frame Inter-chr p13.13 q13.1 25580 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-LINC00028 TPX2 chr20 30347982 + LINC00028 chr20 30074835 + Exonic hg19 COAD TCGA-D5-6531-01A 7 30 CDS-5'UTR Intra-chr q11.21 q11.21 Seq+ 25581 ChimerSeq STARFusion TCGA_RNA-Seq ABHD16A-CLIC1 ABHD16A chr6 31668719 - CLIC1 chr6 31701449 - Exonic hg19 COAD TCGA-D5-6531-01A 3 17 Out-of-frame Intra-chr Seq+ 25582 ChimerSeq STARFusion TCGA_RNA-Seq ABHD16A-CLIC1 ABHD16A chr6 31668719 - CLIC1 chr6 31700175 - Exonic hg19 COAD TCGA-D5-6531-01A 2 16 In-Frame Intra-chr Seq+ 25583 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-REM1 TPX2 chr20 30347982 + REM1 chr20 30071962 + Exonic hg19 COAD TCGA-D5-6531-01A 3 5 In-Frame Intra-chr q11.21 q11.21 Seq+ 25584 ChimerSeq STARFusion TCGA_RNA-Seq LRBA-SH3D19 LRBA chr4 151682935 - SH3D19 chr4 152070713 - Exonic hg19 COAD TCGA-CM-6170-01A 9 14 Out-of-frame Intra-chr q31.3 q31.3 KB Seq+ 25585 ChimerSeq STARFusion TCGA_RNA-Seq SLC12A2-C5orf58 SLC12A2 chr5 127524701 + C5orf58 chr5 169656216 + Exonic hg19 COAD TCGA-CM-6170-01A 4 20 Out-of-frame Intra-chr q23.3 q35.1 Seq+ 25586 ChimerSeq STARFusion TCGA_RNA-Seq ITCH-MANBAL ITCH chr20 32996598 + MANBAL chr20 35944711 + Exonic hg19 COAD TCGA-CM-6170-01A 4 7 Out-of-frame Intra-chr q11.22 q11.23 Seq+ 25587 ChimerSeq STARFusion TCGA_RNA-Seq SERINC3-WFDC11 SERINC3 chr20 43138532 - WFDC11 chr20 44279290 - Exonic hg19 COAD TCGA-CM-6170-01A 3 5 CDS-5'UTR Intra-chr q13.12 q13.12 Seq+ 25588 ChimerSeq STARFusion TCGA_RNA-Seq HM13-ZBTB46 HM13 chr20 30137924 + ZBTB46 chr20 62407315 - Exonic hg19 COAD TCGA-CM-6170-01A 2 6 In-Frame Intra-chr q11.21 q13.33 Transcription factor Seq+ 25589 ChimerSeq STARFusion TCGA_RNA-Seq ZNF107-FOXP2 ZNF107 chr7 64152338 + FOXP2 chr7 113802999 + Exonic hg19 COAD TCGA-CM-6170-01A 2 5 CDS-5'UTR Intra-chr q11.21 Transcription factor q31.1 Transcription factor Seq+ 25590 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-INPP5A IGH@ chr14 106111040 - INPP5A chr10 134511407 + Exonic hg19 COAD TCGA-AA-3554-01A 5 0 Out-of-frame Inter-chr 32.33 q26.3 25591 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-INPP5A IGHG1 chr14 106209321 - INPP5A chr10 134511407 + Exonic hg19 COAD TCGA-AA-3554-01A 5 0 Out-of-frame Inter-chr q32.33 q26.3 25592 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-INPP5A IGH@ chr14 106237656 - INPP5A chr10 134511407 + Exonic hg19 COAD TCGA-AA-3554-01A 4 0 Out-of-frame Inter-chr 32.33 q26.3 25593 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31831073 - Exonic hg19 COAD TCGA-AA-3554-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 25594 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-AA-3554-01A 3 0 Out-of-frame Inter-chr p22.1 25595 ChimerSeq STARFusion TCGA_RNA-Seq HCG4P3-ZNF536 HCG4P3 chr6 29974382 - ZNF536 chr19 31039209 + Exonic hg19 COAD TCGA-AA-3554-01A 3 0 Out-of-frame Inter-chr q12 Transcription factor 25596 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-TYRO3 IGKC chr2 89156966 - TYRO3 chr15 41854865 + Exonic hg19 COAD TCGA-AA-3554-01A 3 0 Out-of-frame Inter-chr p11.2 q15.1 TK:Axl 25597 ChimerSeq STARFusion TCGA_RNA-Seq MRPL21-POLD2 MRPL21 chr11 68659626 - POLD2 chr7 44161702 - Exonic hg19 COAD TCGA-AA-3554-01A 3 0 Out-of-frame Inter-chr q13.3 p13 25598 ChimerSeq STARFusion TCGA_RNA-Seq CTSD-CENPB CTSD chr11 1776150 - CENPB chr20 3767191 - Exonic hg19 COAD TCGA-A6-2684-01A 3 0 Out-of-frame Inter-chr p15.5 p13 Transcription factor 25599 ChimerSeq STARFusion TCGA_RNA-Seq CTSD-LLGL1 CTSD chr11 1776137 - LLGL1 chr17 18148036 + Exonic hg19 COAD TCGA-A6-2684-01A 3 0 Out-of-frame Inter-chr p15.5 Tumor suppressor gene 25600 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1107-RPS29 KIAA1107 chr1 92633440 + RPS29 chr14 50050387 - Exonic hg19 COAD TCGA-A6-2684-01A 3 0 Out-of-frame Inter-chr p22.1 q21.3 25601 ChimerSeq STARFusion TCGA_RNA-Seq RWDD3-ARSD RWDD3 chr1 95712491 + ARSD chrX 2831885 - Exonic hg19 COAD TCGA-AA-3956-01A 3 0 Out-of-frame Inter-chr p21.3 p22.33 25602 ChimerSeq STARFusion TCGA_RNA-Seq ACACA-GGNBP2 ACACA chr17 35578645 - GGNBP2 chr17 34937774 + Exonic hg19 COAD TCGA-AA-3956-01A 2 0 Out-of-frame Intra-chr Tumor suppressor gene 25603 ChimerSeq STARFusion TCGA_RNA-Seq BRK1-SDHAP1 BRK1 chr3 10167392 + SDHAP1 chr3 195686957 - Exonic hg19 COAD TCGA-AA-3956-01A 2 0 CDS-3'UTR Intra-chr p25.3 q29 25604 ChimerSeq STARFusion TCGA_RNA-Seq PIP5K1B-NDFIP2 PIP5K1B chr9 71509554 + NDFIP2 chr13 80094945 + Exonic hg19 COAD TCGA-AA-3956-01A 2 0 In-Frame Inter-chr q21.11 q31.1 25605 ChimerSeq STARFusion TCGA_RNA-Seq RPL10-C12orf57 RPL10 chrX 153627935 + C12orf57 chr12 7054934 + Exonic hg19 COAD TCGA-AA-3956-01A 2 0 In-Frame Inter-chr q28 Tumor suppressor gene p13.31 25606 ChimerSeq STARFusion TCGA_RNA-Seq SLC38A10-UFD1L SLC38A10 chr17 79263491 - UFD1L chr22 19462623 - Exonic hg19 COAD TCGA-AA-3956-01A 2 0 In-Frame Inter-chr q25.3 25607 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P2 FTL chr19 49469056 + FTH1P2 chr1 228823167 + Exonic hg19 COAD TCGA-AA-3495-01A 4 0 Out-of-frame Inter-chr q13.33 q42.13 25608 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 COAD TCGA-AA-3495-01A 4 0 Out-of-frame Inter-chr q13.33 p21.1 25609 ChimerSeq STARFusion TCGA_RNA-Seq SLC12A7-IGH@ SLC12A7 chr5 1083930 - IGH@ chr14 106236307 - Exonic hg19 COAD TCGA-AA-3495-01A 3 0 Out-of-frame Inter-chr p15.33 32.33 25610 ChimerSeq STARFusion TCGA_RNA-Seq SLC12A7-IGHG3 SLC12A7 chr5 1083930 - IGHG3 chr14 106236307 - Exonic hg19 COAD TCGA-AA-3495-01A 3 0 Out-of-frame Inter-chr p15.33 25611 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525072 - IGHG1 chr14 106209410 - Exonic hg19 COAD TCGA-AA-A00R-01A 6 0 Out-of-frame Inter-chr q34 Oncogene q32.33 25612 ChimerSeq STARFusion TCGA_RNA-Seq CDK11A-IGH@ CDK11A chr1 1655678 - IGH@ chr14 106330468 - Exonic hg19 COAD TCGA-AA-A00R-01A 3 0 Out-of-frame Inter-chr p36.33 32.33 25613 ChimerSeq STARFusion TCGA_RNA-Seq CDK11A-IGHJ4 CDK11A chr1 1655678 - IGHJ4 chr14 106330468 - Exonic hg19 COAD TCGA-AA-A00R-01A 3 0 Out-of-frame Inter-chr p36.33 25614 ChimerSeq STARFusion TCGA_RNA-Seq EIF4ENIF1-COMT EIF4ENIF1 chr22 31867830 - COMT chr22 19948722 + Exonic hg19 COAD TCGA-A6-5657-01A 22 59 CDS-5'UTR Intra-chr q12.2 q11.21 Seq+ 25615 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-CA10 BCAS3 chr17 58967132 + CA10 chr17 49731097 - Exonic hg19 COAD TCGA-A6-5657-01A 2 7 In-Frame Intra-chr q23.2 q22 Seq+ 25616 ChimerSeq STARFusion TCGA_RNA-Seq PISD-MED15 PISD chr22 32026790 - MED15 chr22 20891404 + Exonic hg19 COAD TCGA-A6-5657-01A 3 0 5'UTR-CDS Intra-chr q12.2 q11.21 Seq+ 25617 ChimerSeq STARFusion TCGA_RNA-Seq BCR-ARVCF BCR chr22 23615961 + ARVCF chr22 19969614 - Exonic hg19 COAD TCGA-A6-5657-01A 2 3 In-Frame Intra-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q11.21 Seq+ 25618 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 COAD TCGA-A6-5657-01A 2 1 CDS-5'UTR Intra-chr p12 p12 Transcription factor 25619 ChimerSeq STARFusion TCGA_RNA-Seq ACTG1-HCG18 ACTG1 chr17 79478380 - HCG18 chr6 30256988 - Exonic hg19 COAD TCGA-AA-A01S-01A 6 0 Out-of-frame Inter-chr q25.3 25620 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC10-RPL31P50 DNAJC10 chr2 183653145 + RPL31P50 chr12 31750085 - Exonic hg19 COAD TCGA-AA-A01S-01A 4 0 Out-of-frame Inter-chr q32.1 p11.21 25621 ChimerSeq STARFusion TCGA_RNA-Seq AIF1L-RPL13AP7 AIF1L chr9 133995770 + RPL13AP7 chr21 26734505 + Exonic hg19 COAD TCGA-AA-A01S-01A 3 0 Out-of-frame Inter-chr q34.12 q21.2 25622 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD6-RPL4P4 ANKRD6 chr6 90272273 + RPL4P4 chr3 185136396 - Exonic hg19 COAD TCGA-AA-A01S-01A 3 0 Out-of-frame Inter-chr q15 q27.2 25623 ChimerSeq STARFusion TCGA_RNA-Seq ASNA1-EIF3B ASNA1 chr19 12848456 + EIF3B chr7 2418842 + Exonic hg19 COAD TCGA-AA-A01S-01A 3 0 Out-of-frame Inter-chr p13.13 p22.3 25624 ChimerSeq STARFusion TCGA_RNA-Seq LGALS3-TRAPPC9 LGALS3 chr14 55609467 + TRAPPC9 chr8 141415767 - Exonic hg19 COAD TCGA-AA-A01S-01A 3 0 Out-of-frame Inter-chr q22.3 q24.3 25625 ChimerSeq STARFusion TCGA_RNA-Seq RPL8-EFS RPL8 chr8 146015780 - EFS chr14 23828978 - Exonic hg19 COAD TCGA-AA-A01S-01A 3 0 Out-of-frame Inter-chr q24.3 q11.2 25626 ChimerSeq STARFusion TCGA_RNA-Seq RIPK1-SERPINB9 RIPK1 chr6 3064293 + SERPINB9 chr6 2900855 - Exonic hg19 COAD TCGA-AA-3833-01A 7 0 5'UTR-5'UTR Intra-chr p25.2 TKL:RIPK p25.2 25627 ChimerSeq STARFusion TCGA_RNA-Seq C12orf36-IGL@ C12orf36 chr12 13534881 - IGL@ chr22 23235961 + Exonic hg19 COAD TCGA-AA-3833-01A 4 0 Out-of-frame Inter-chr q11.22 25628 ChimerSeq STARFusion TCGA_RNA-Seq C12orf36-IGLC1 C12orf36 chr12 13534881 - IGLC1 chr22 23235961 + Exonic hg19 COAD TCGA-AA-3833-01A 4 0 Out-of-frame Inter-chr q11.22 25629 ChimerSeq STARFusion TCGA_RNA-Seq C12orf36-IGLJ1 C12orf36 chr12 13534881 - IGLJ1 chr22 23235961 + Exonic hg19 COAD TCGA-AA-3833-01A 4 0 Out-of-frame Inter-chr q11.22 25630 ChimerSeq STARFusion TCGA_RNA-Seq C12orf36-IGLL5 C12orf36 chr12 13534878 - IGLL5 chr22 23235964 + Exonic hg19 COAD TCGA-AA-3833-01A 4 0 Out-of-frame Inter-chr q11.22 25631 ChimerSeq STARFusion TCGA_RNA-Seq HSPA1B-C2 HSPA1B chr6 31797487 + C2 chr6 31868873 + Exonic hg19 COAD TCGA-AA-3833-01A 4 0 Out-of-frame Intra-chr p21.33 25632 ChimerSeq STARFusion TCGA_RNA-Seq ACTG1-HCG18 ACTG1 chr17 79478380 - HCG18 chr6 30256988 - Exonic hg19 COAD TCGA-AA-3833-01A 3 0 Out-of-frame Inter-chr q25.3 25633 ChimerSeq STARFusion TCGA_RNA-Seq HSPA1B-C2 HSPA1B chr6 31797419 + C2 chr6 31868874 + Exonic hg19 COAD TCGA-AA-3833-01A 3 0 Out-of-frame Intra-chr p21.33 25634 ChimerSeq STARFusion TCGA_RNA-Seq HSPA1B-C2 HSPA1B chr6 31796389 + C2 chr6 31868873 + Exonic hg19 COAD TCGA-AA-3833-01A 3 0 Out-of-frame Intra-chr p21.33 25635 ChimerSeq STARFusion TCGA_RNA-Seq FAM172A-FLJ42709 FAM172A chr5 93111865 - FLJ42709 chr5 92747215 - Exonic hg19 COAD TCGA-AZ-4315-01A 5 66 3'UTR-3'UTR Intra-chr q15 Tumor suppressor gene Seq+ 25636 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R12C-CNN2 PPP1R12C chr19 55610152 - CNN2 chr19 1036129 + Exonic hg19 COAD TCGA-NH-A8F7-01A 2 0 In-Frame Intra-chr q13.42 p13.3 Seq+ 25637 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31802768 + C2 chr6 31868874 + Exonic hg19 COAD TCGA-AA-3930-01A 5 0 Out-of-frame Intra-chr p21.33 25638 ChimerSeq STARFusion TCGA_RNA-Seq ALDH2-RPL4 ALDH2 chr12 112221074 + RPL4 chr15 66791835 - Exonic hg19 COAD TCGA-AA-3930-01A 4 0 Out-of-frame Inter-chr q24.12 q22.31 25639 ChimerSeq STARFusion TCGA_RNA-Seq ALDH2-EEF1A1 ALDH2 chr12 112221075 + EEF1A1 chr6 74229773 - Exonic hg19 COAD TCGA-AA-3930-01A 3 0 Out-of-frame Inter-chr q24.12 q13 Tumor suppressor gene 25640 ChimerSeq STARFusion TCGA_RNA-Seq ALDH2-PTMAP2 ALDH2 chr12 112221076 + PTMAP2 chr5 118309574 + Exonic hg19 COAD TCGA-AA-3930-01A 3 0 Out-of-frame Inter-chr q24.12 q23.1 25641 ChimerSeq STARFusion TCGA_RNA-Seq ALDH2-RPL31 ALDH2 chr12 112221074 + RPL31 chr2 101619194 + Exonic hg19 COAD TCGA-AA-3930-01A 3 0 Out-of-frame Inter-chr q24.12 q11.2 25642 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC10-RPL31P50 DNAJC10 chr2 183653145 + RPL31P50 chr12 31750085 - Exonic hg19 COAD TCGA-AA-3930-01A 3 0 Out-of-frame Inter-chr q32.1 p11.21 25643 ChimerSeq STARFusion TCGA_RNA-Seq PQBP1-HSPB2 PQBP1 chrX 48759668 + HSPB2 chr11 111784242 + Exonic hg19 COAD TCGA-AA-3930-01A 3 0 Out-of-frame Inter-chr p11.23 q23.1 25644 ChimerSeq STARFusion TCGA_RNA-Seq RNA5SP92-EEF1A1 RNA5SP92 chr2 33558018 + EEF1A1 chr6 74229184 - Exonic hg19 COAD TCGA-AA-3930-01A 3 0 Out-of-frame Inter-chr p22.3 q13 Tumor suppressor gene 25645 ChimerSeq STARFusion TCGA_RNA-Seq PANK2-PAK7 PANK2 chr20 3870375 + PAK7 chr20 9624987 - Exonic hg19 COAD TCGA-DM-A1HA-01A 6 19 CDS-5'UTR Intra-chr p13 Seq+ 25646 ChimerSeq STARFusion TCGA_RNA-Seq FHOD3-MTUS2 FHOD3 chr18 34340745 + MTUS2 chr13 30054287 + Exonic hg19 COAD TCGA-DM-A1HA-01A 2 10 In-Frame Inter-chr q12.2 q12.3 Seq+ 25647 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-ANKRD13B TAOK1 chr17 27718042 + ANKRD13B chr17 27934760 + Exonic hg19 COAD TCGA-DM-A1HA-01A 2 1 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 25648 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G1-NCOR2 EIF4G1 chr3 184052769 + NCOR2 chr12 124824735 - Exonic hg19 COAD TCGA-AA-3715-01A 8 0 Out-of-frame Inter-chr q27.1 q24.31 25649 ChimerSeq STARFusion TCGA_RNA-Seq AHCTF1-SMYD3 AHCTF1 chr1 247094880 - SMYD3 chr1 246093239 - Exonic hg19 COAD TCGA-AA-3715-01A 5 0 5'UTR-CDS Intra-chr q44 Transcription factor q44 Transcription factor 25650 ChimerSeq STARFusion TCGA_RNA-Seq CTSD-CENPB CTSD chr11 1776150 - CENPB chr20 3767191 - Exonic hg19 COAD TCGA-AA-3715-01A 4 0 Out-of-frame Inter-chr p15.5 p13 Transcription factor 25651 ChimerSeq STARFusion TCGA_RNA-Seq FAF2-ARL10 FAF2 chr5 175875471 + ARL10 chr5 175815277 + Exonic hg19 COAD TCGA-AA-3715-01A 3 0 CDS-3'UTR Intra-chr q35.2 q35.2 25652 ChimerSeq STARFusion TCGA_RNA-Seq ATF7-ATP5G2 ATF7 chr12 54020063 - ATP5G2 chr12 54063732 - Exonic hg19 COAD TCGA-G4-6304-01A 3 7 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.13 Seq+ 25653 ChimerSeq STARFusion TCGA_RNA-Seq ATF7-ATP5G2 ATF7 chr12 54019735 - ATP5G2 chr12 54063732 - Exonic hg19 COAD TCGA-G4-6304-01A 2 7 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.13 Seq+ 25654 ChimerSeq STARFusion TCGA_RNA-Seq CHD1-RGMB CHD1 chr5 98215256 - RGMB chr5 98128789 + Exonic hg19 COAD TCGA-DM-A288-01A 9 39 In-Frame Intra-chr q21.1 Tumor suppressor gene q15 Seq+ 25655 ChimerSeq STARFusion TCGA_RNA-Seq CCNL2-MRPL20 CCNL2 chr1 1333613 - MRPL20 chr1 1337636 - Exonic hg19 COAD TCGA-D5-6924-01A 42 81 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 25656 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-AA-3872-01A 7 0 Out-of-frame Inter-chr p22.1 25657 ChimerSeq STARFusion TCGA_RNA-Seq HKR1-PGAP3 HKR1 chr19 37838774 + PGAP3 chr17 37842272 - Exonic hg19 COAD TCGA-AA-3872-01A 5 0 In-Frame Inter-chr q13.12 Transcription factor q12 Oncogene 25658 ChimerSeq STARFusion TCGA_RNA-Seq RNA5SP92-EEF1A1 RNA5SP92 chr2 33558018 + EEF1A1 chr6 74229184 - Exonic hg19 COAD TCGA-AA-3872-01A 4 0 Out-of-frame Inter-chr p22.3 q13 Tumor suppressor gene 25659 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-ETV5 TPT1 chr13 45914888 - ETV5 chr3 185826703 - Exonic hg19 COAD TCGA-AA-3872-01A 4 0 Out-of-frame Inter-chr q14.13 q27.2 Oncogene Transcription factor 25660 ChimerSeq STARFusion TCGA_RNA-Seq ZNF24-ACAA2 ZNF24 chr18 32924334 - ACAA2 chr18 47322251 - Exonic hg19 COAD TCGA-D5-6929-01A 62 159 5'UTR-CDS Intra-chr q12.2 Transcription factor q21.1 Seq+ 25661 ChimerSeq STARFusion TCGA_RNA-Seq GNA13-ASPSCR1 GNA13 chr17 63049620 - ASPSCR1 chr17 79966913 + Exonic hg19 COAD TCGA-D5-6929-01A 31 112 In-Frame Intra-chr q24.1 q25.3 Seq+ 25662 ChimerSeq STARFusion TCGA_RNA-Seq GNA13-ASPSCR1 GNA13 chr17 63049620 - ASPSCR1 chr17 79966928 + Exonic hg19 COAD TCGA-D5-6929-01A 8 112 In-Frame Intra-chr q24.1 q25.3 Seq+ 25663 ChimerSeq STARFusion TCGA_RNA-Seq PRKAR1A-PITPNC1 PRKAR1A chr17 66511717 + PITPNC1 chr17 65528918 + Exonic hg19 COAD TCGA-D5-6929-01A 14 73 In-Frame Intra-chr q24.2 Oncogene Tumor suppressor gene q24.2 Seq+ 25664 ChimerSeq STARFusion TCGA_RNA-Seq ELF1-MRPS31 ELF1 chr13 41532972 - MRPS31 chr13 41303737 - Exonic hg19 COAD TCGA-D5-6929-01A 10 48 In-Frame Intra-chr q14.11 Transcription factor q14.11 25665 ChimerSeq STARFusion TCGA_RNA-Seq TPGS2-DSG1 TPGS2 chr18 34398857 - DSG1 chr18 28906544 + Exonic hg19 COAD TCGA-D5-6929-01A 6 22 In-Frame Intra-chr q12.2 q12.1 Seq+ 25666 ChimerSeq STARFusion TCGA_RNA-Seq TPGS2-DSG1 TPGS2 chr18 34398857 - DSG1 chr18 28898179 + Exonic hg19 COAD TCGA-D5-6929-01A 4 22 CDS-5'UTR Intra-chr q12.2 q12.1 Seq+ 25667 ChimerSeq STARFusion TCGA_RNA-Seq ACACA-GSDMB ACACA chr17 35627642 - GSDMB chr17 38068750 - Exonic hg19 COAD TCGA-D5-6929-01A 2 14 Out-of-frame Intra-chr q21.1 Seq+ 25668 ChimerSeq STARFusion TCGA_RNA-Seq DNM1L-TSPAN11 DNM1L chr12 32832399 + TSPAN11 chr12 31106915 + Exonic hg19 COAD TCGA-D5-6929-01A 2 13 CDS-5'UTR Intra-chr p11.21 p11.21 Seq+ 25669 ChimerSeq STARFusion TCGA_RNA-Seq RAB40B-TAF15 RAB40B chr17 80656331 - TAF15 chr17 34165428 + Exonic hg19 COAD TCGA-D5-6929-01A 3 5 Out-of-frame Intra-chr q25.3 q12 Seq+ 25670 ChimerSeq STARFusion TCGA_RNA-Seq USP32-STXBP4 USP32 chr17 58258685 - STXBP4 chr17 53150261 + Exonic hg19 COAD TCGA-D5-6929-01A 2 3 In-Frame Intra-chr q23.2 q22 Seq+ 25671 ChimerSeq STARFusion TCGA_RNA-Seq TRPC4AP-DYNLRB1 TRPC4AP chr20 33622926 - DYNLRB1 chr20 33128385 + Exonic hg19 COAD TCGA-A6-6782-01A 42 202 In-Frame Intra-chr q11.22 q11.22 Seq+ 25672 ChimerSeq STARFusion TCGA_RNA-Seq FLOT1-LINC00243 FLOT1 chr6 30707935 - LINC00243 chr6 30766549 - Exonic hg19 COAD TCGA-A6-6782-01A 50 106 Out-of-frame Intra-chr p21.33 25673 ChimerSeq STARFusion TCGA_RNA-Seq MTDH-LAPTM4B MTDH chr8 98673401 + LAPTM4B chr8 98817581 + Exonic hg19 COAD TCGA-A6-6782-01A 22 69 In-Frame Intra-chr q22.1 q22.1 25674 ChimerSeq STARFusion TCGA_RNA-Seq GRHL2-MATN2 GRHL2 chr8 102661727 + MATN2 chr8 98991114 + Exonic hg19 COAD TCGA-AZ-6608-01A 4 5 Out-of-frame Intra-chr q22.3 Transcription factor q22.1 Seq+ 25675 ChimerSeq STARFusion TCGA_RNA-Seq KCNQ1-SCT KCNQ1 chr11 2549248 + SCT chr11 626530 - Exonic hg19 COAD TCGA-DM-A0XF-01A 90 306 Out-of-frame Intra-chr p15.5 Seq+ 25676 ChimerSeq STARFusion TCGA_RNA-Seq KCNQ1-SCT KCNQ1 chr11 2549248 + SCT chr11 626989 - Exonic hg19 COAD TCGA-DM-A0XF-01A 52 306 Out-of-frame Intra-chr p15.5 Seq+ 25677 ChimerSeq STARFusion TCGA_RNA-Seq PPP2CA-VDAC1 PPP2CA chr5 133561451 - VDAC1 chr5 133309539 - Exonic hg19 COAD TCGA-DM-A0XF-01A 43 209 In-Frame Intra-chr q31.1 Tumor suppressor gene q31.1 Seq+ 25678 ChimerSeq STARFusion TCGA_RNA-Seq DDAH1-TRABD2B DDAH1 chr1 85930426 - TRABD2B chr1 48267291 - Exonic hg19 COAD TCGA-DM-A0XF-01A 4 18 Out-of-frame Intra-chr p22.3 p33 Seq+ 25679 ChimerSeq STARFusion TCGA_RNA-Seq FOXO3-GMDS FOXO3 chr6 108883032 + GMDS chr6 1961200 - Exonic hg19 COAD TCGA-DM-A0XF-01A 3 7 In-Frame Intra-chr q21 Oncogene Tumor suppressor gene Transcription factor p25.3 Seq+ 25680 ChimerSeq STARFusion TCGA_RNA-Seq BMP7-EEF1A2 BMP7 chr20 55840761 - EEF1A2 chr20 62129187 - Exonic hg19 COAD TCGA-DM-A0XF-01A 2 6 CDS-5'UTR Intra-chr q13.31 q13.33 Seq+ 25681 ChimerSeq STARFusion TCGA_RNA-Seq IL27RA-RLN3 IL27RA chr19 14160126 + RLN3 chr19 14141522 + Exonic hg19 COAD TCGA-AA-A02E-01A 14 0 In-Frame Intra-chr p13.12 p13.12 Seq+ 25682 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC10-RPL31P50 DNAJC10 chr2 183653145 + RPL31P50 chr12 31750085 - Exonic hg19 COAD TCGA-AA-A02E-01A 3 0 Out-of-frame Inter-chr q32.1 p11.21 25683 ChimerSeq STARFusion TCGA_RNA-Seq RPS19BP1-KCNQ4 RPS19BP1 chr22 39928700 - KCNQ4 chr1 41249768 + Exonic hg19 COAD TCGA-AA-A02E-01A 3 0 Out-of-frame Inter-chr q13.1 p34.2 25684 ChimerSeq STARFusion TCGA_RNA-Seq ZNF121-ADCY5 ZNF121 chr19 9695137 - ADCY5 chr3 123022066 - Exonic hg19 COAD TCGA-AA-A02E-01A 3 0 5'UTR-CDS Inter-chr p13.2 Transcription factor q21.1 Seq+ 25685 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 COAD TCGA-AA-A02E-01A 3 0 Out-of-frame Inter-chr p13.13 q13.1 25686 ChimerSeq STARFusion TCGA_RNA-Seq ARFGEF1-CSPP1 ARFGEF1 chr8 68150578 - CSPP1 chr8 68024207 + Exonic hg19 COAD TCGA-RU-A8FL-01A 4 15 In-Frame Intra-chr q13.2 q13.1 Seq+ 25687 ChimerSeq STARFusion TCGA_RNA-Seq CSPP1-TERF1 CSPP1 chr8 68015370 + TERF1 chr8 73958196 + Exonic hg19 COAD TCGA-RU-A8FL-01A 2 8 Out-of-frame Intra-chr q13.1 q21.11 Transcription factor Seq+ 25688 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-VMP1 TAOK1 chr17 27844674 + VMP1 chr17 57842332 + Exonic hg19 COAD TCGA-AZ-4323-01A 18 80 In-Frame Intra-chr q11.2 q23.1 Seq+ 25689 ChimerSeq STARFusion TCGA_RNA-Seq MID1-DOCK11 MID1 chrX 10851673 - DOCK11 chrX 117796649 + Exonic hg19 COAD TCGA-AZ-4323-01A 7 41 5'UTR-CDS Intra-chr p22.2 q24 Seq+ 25690 ChimerSeq STARFusion TCGA_RNA-Seq SNX13-AUTS2 SNX13 chr7 17836450 - AUTS2 chr7 69755354 + Exonic hg19 COAD TCGA-AZ-4323-01A 3 5 Out-of-frame Intra-chr p21.1 q11.22 Seq+ 25691 ChimerSeq STARFusion TCGA_RNA-Seq POLR2L-MRPL12 POLR2L chr11 840443 - MRPL12 chr17 79671317 + Exonic hg19 COAD TCGA-AA-3977-01A 3 0 Out-of-frame Inter-chr p15.5 q25.3 25692 ChimerSeq STARFusion TCGA_RNA-Seq POLR2L-SLC25A10 POLR2L chr11 840443 - SLC25A10 chr17 79671317 + Exonic hg19 COAD TCGA-AA-3977-01A 3 0 Out-of-frame Inter-chr p15.5 q25.3 25693 ChimerSeq STARFusion TCGA_RNA-Seq WDR41-HNRNPA3 WDR41 chr5 76760586 - HNRNPA3 chr2 178081588 + Exonic hg19 COAD TCGA-AA-3977-01A 2 0 Out-of-frame Inter-chr q14.1 q31.2 25694 ChimerSeq STARFusion TCGA_RNA-Seq TFDP2-XRN1 TFDP2 chr3 141820577 - XRN1 chr3 142084208 - Exonic hg19 COAD TCGA-D5-6928-01A 2 3 In-Frame Intra-chr q23 Transcription factor q23 Seq+ 25695 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1467-EMP1 KIAA1467 chr12 13229077 + EMP1 chr12 13364403 + Exonic hg19 COAD TCGA-D5-6928-01A 2 2 CDS-5'UTR Intra-chr p13.1 Tumor suppressor gene 25696 ChimerSeq STARFusion TCGA_RNA-Seq PAN3-FLT3 PAN3 chr13 28752072 + FLT3 chr13 28644749 - Exonic hg19 COAD TCGA-AA-3712-01A 12 16 Out-of-frame Intra-chr q12.2 q12.2 TK:PDGFR Oncogene Tumor suppressor gene Seq+ 25697 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-AZ-4308-01A 6 0 Out-of-frame Inter-chr p22.1 25698 ChimerSeq STARFusion TCGA_RNA-Seq LINC00987-TMEM219 LINC00987 chr12 9392923 + TMEM219 chr16 29974577 + Exonic hg19 COAD TCGA-AZ-4308-01A 4 0 Out-of-frame Inter-chr p13.31 p11.2 25699 ChimerSeq STARFusion TCGA_RNA-Seq RPLP2-DTWD2 RPLP2 chr11 810330 + DTWD2 chr5 118324071 - Exonic hg19 COAD TCGA-AZ-4308-01A 4 0 Out-of-frame Inter-chr p15.5 q23.1 25700 ChimerSeq STARFusion TCGA_RNA-Seq DIO3OS-IGFBP4 DIO3OS chr14 102023995 - IGFBP4 chr17 38613599 + Exonic hg19 COAD TCGA-AZ-4308-01A 3 0 Out-of-frame Inter-chr q32.31 q21.2 Tumor suppressor gene 25701 ChimerSeq STARFusion TCGA_RNA-Seq EEF1G-TSC22D1 EEF1G chr11 62327184 - TSC22D1 chr13 45008723 - Exonic hg19 COAD TCGA-AZ-4308-01A 3 0 Out-of-frame Inter-chr q12.3 q14.11 Tumor suppressor gene Transcription factor 25702 ChimerSeq STARFusion TCGA_RNA-Seq FAM89B-TNRC18 FAM89B chr11 65340302 + TNRC18 chr7 5385388 - Exonic hg19 COAD TCGA-AZ-4308-01A 3 0 Out-of-frame Inter-chr q13.1 p22.1 25703 ChimerSeq STARFusion TCGA_RNA-Seq FMOD-SNRPC FMOD chr1 203310059 - SNRPC chr6 34725689 + Exonic hg19 COAD TCGA-AZ-4308-01A 3 0 3'UTR-CDS Inter-chr q32.1 p21.31 25704 ChimerSeq STARFusion TCGA_RNA-Seq PPDPF-PDE6A PPDPF chr20 62152714 + PDE6A chr5 149246803 - Exonic hg19 COAD TCGA-AZ-4308-01A 3 0 Out-of-frame Inter-chr q13.33 q32 25705 ChimerSeq STARFusion TCGA_RNA-Seq RPL8-SYNJ2 RPL8 chr8 146017187 - SYNJ2 chr6 158514057 + Exonic hg19 COAD TCGA-AZ-4308-01A 3 0 Out-of-frame Inter-chr q24.3 q25.3 25706 ChimerSeq STARFusion TCGA_RNA-Seq RPS23-GDI2 RPS23 chr5 81573519 - GDI2 chr10 5855222 - Exonic hg19 COAD TCGA-AZ-4308-01A 3 0 Out-of-frame Inter-chr q14.2 p15.1 25707 ChimerSeq STARFusion TCGA_RNA-Seq RPS9-HNRNPUL1 RPS9 chr19 54705058 + HNRNPUL1 chr19 41782087 + Exonic hg19 COAD TCGA-AZ-4308-01A 3 0 Out-of-frame Intra-chr q13.2 25708 ChimerSeq STARFusion TCGA_RNA-Seq SSSCA1-TNRC18 SSSCA1 chr11 65340302 + TNRC18 chr7 5385388 - Exonic hg19 COAD TCGA-AZ-4308-01A 3 0 Out-of-frame Inter-chr q13.1 p22.1 25709 ChimerSeq STARFusion TCGA_RNA-Seq TAF15-RPS6 TAF15 chr17 34171938 + RPS6 chr9 19376388 - Exonic hg19 COAD TCGA-AZ-4308-01A 3 0 Out-of-frame Inter-chr q12 p22.1 25710 ChimerSeq STARFusion TCGA_RNA-Seq UQCR11-SDCBP2 UQCR11 chr19 1599465 - SDCBP2 chr20 1293397 - Exonic hg19 COAD TCGA-AZ-4308-01A 3 0 Out-of-frame Inter-chr p13.3 p13 25711 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868873 - SLC44A4 chr6 31831427 - Exonic hg19 COAD TCGA-AZ-4308-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 25712 ChimerSeq STARFusion TCGA_RNA-Seq NF1-TMC8 NF1 chr17 29422387 + TMC8 chr17 76136915 + Exonic hg19 COAD TCGA-AA-3975-01A 12 0 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q25.3 25713 ChimerSeq STARFusion TCGA_RNA-Seq PAPSS2-B2M PAPSS2 chr10 89469070 + B2M chr15 45007621 + Exonic hg19 COAD TCGA-A6-2678-01A 17 0 In-Frame Inter-chr q23.2 Oncogene 25714 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 COAD TCGA-A6-2678-01A 6 0 Out-of-frame Inter-chr q13.33 p21.1 25715 ChimerSeq STARFusion TCGA_RNA-Seq GRB2-EIF4G2 GRB2 chr17 73314424 - EIF4G2 chr11 10819118 - Exonic hg19 COAD TCGA-A6-2678-01A 4 0 Out-of-frame Inter-chr q25.1 p15.4 25716 ChimerSeq STARFusion TCGA_RNA-Seq ABHD11-RPL35 ABHD11 chr7 73152823 - RPL35 chr9 127620282 - Exonic hg19 COAD TCGA-AA-3973-01A 3 0 Out-of-frame Inter-chr q11.23 q33.3 25717 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31802768 + C2 chr6 31868874 + Exonic hg19 COAD TCGA-AA-3973-01A 3 0 Out-of-frame Intra-chr p21.33 25718 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC10-RPL31P50 DNAJC10 chr2 183653145 + RPL31P50 chr12 31750085 - Exonic hg19 COAD TCGA-AA-3973-01A 3 0 Out-of-frame Inter-chr q32.1 p11.21 25719 ChimerSeq STARFusion TCGA_RNA-Seq RNA5SP92-EEF1A1 RNA5SP92 chr2 33558018 + EEF1A1 chr6 74229184 - Exonic hg19 COAD TCGA-AA-3973-01A 3 0 Out-of-frame Inter-chr p22.3 q13 Tumor suppressor gene 25720 ChimerSeq STARFusion TCGA_RNA-Seq TMEM245-IKBKAP TMEM245 chr9 111843119 - IKBKAP chr9 111689733 - Exonic hg19 COAD TCGA-DM-A1D4-01A 2 11 In-Frame Intra-chr q31.3 q31.3 Seq+ 25721 ChimerSeq STARFusion TCGA_RNA-Seq PTPN3-IGF2 PTPN3 chr9 112141552 - IGF2 chr11 2153099 - Exonic hg19 COAD TCGA-AA-3531-01A 3 0 Out-of-frame Inter-chr q31.3 p15.5 Oncogene 25722 ChimerSeq STARFusion TCGA_RNA-Seq RPL37A-ETV5 RPL37A chr2 217364031 + ETV5 chr3 185826703 - Exonic hg19 COAD TCGA-AA-3531-01A 3 0 Out-of-frame Inter-chr q35 q27.2 Oncogene Transcription factor 25723 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A6-IGF2 SLC25A6 chrX 1505465 - IGF2 chr11 2153090 - Exonic hg19 COAD TCGA-AA-3531-01A 3 0 Out-of-frame Inter-chr p22.33 p15.5 Oncogene 25724 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 COAD TCGA-AA-3561-01A 8 0 Out-of-frame Inter-chr q13.33 p21.1 25725 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPUL1-CYP2S1 HNRNPUL1 chr19 41770597 + CYP2S1 chr19 41700449 + Exonic hg19 COAD TCGA-AA-3561-01A 5 0 Out-of-frame Intra-chr q13.2 q13.2 25726 ChimerSeq STARFusion TCGA_RNA-Seq DACH1-DIAPH3 DACH1 chr13 72440054 - DIAPH3 chr13 60413582 - Exonic hg19 COAD TCGA-AA-3561-01A 3 0 Out-of-frame Intra-chr q21.33 Tumor suppressor gene Transcription factor q21.2 25727 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPUL1-CYP2S1 HNRNPUL1 chr19 41770703 + CYP2S1 chr19 41700449 + Exonic hg19 COAD TCGA-AA-3561-01A 3 0 Out-of-frame Intra-chr q13.2 q13.2 25728 ChimerSeq STARFusion TCGA_RNA-Seq RPS27-FAM159B RPS27 chr1 153963699 + FAM159B chr5 63986324 + Exonic hg19 COAD TCGA-AA-3561-01A 3 0 3'UTR-5'UTR Inter-chr q21.3 q12.3 25729 ChimerSeq STARFusion TCGA_RNA-Seq YWHAB-GLO1 YWHAB chr20 43514527 + GLO1 chr6 38654750 - Exonic hg19 COAD TCGA-DM-A1D7-01A 25 101 5'UTR-CDS Inter-chr q13.12 p21.2 Seq+ 25730 ChimerSeq STARFusion TCGA_RNA-Seq YWHAB-GLO1 YWHAB chr20 43516383 + GLO1 chr6 38654750 - Exonic hg19 COAD TCGA-DM-A1D7-01A 7 101 5'UTR-CDS Inter-chr q13.12 p21.2 Seq+ 25731 ChimerSeq STARFusion TCGA_RNA-Seq NFYA-TREML2 NFYA chr6 41058048 + TREML2 chr6 41162571 - Exonic hg19 COAD TCGA-DM-A1D7-01A 2 20 In-Frame Intra-chr p21.1 Transcription factor p21.1 Seq+ 25732 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-ELK2AP GAS6 chr13 114525072 - ELK2AP chr14 106136184 - Exonic hg19 COAD TCGA-D5-6930-01A 3 0 Out-of-frame Inter-chr q34 Oncogene 25733 ChimerSeq STARFusion TCGA_RNA-Seq SERPINE2-FARSB SERPINE2 chr2 224849469 - FARSB chr2 223436741 - Exonic hg19 COAD TCGA-D5-5539-01A 38 129 Out-of-frame Intra-chr q36.1 q36.1 Seq+ 25734 ChimerSeq STARFusion TCGA_RNA-Seq RAD23A-CALR RAD23A chr19 13058823 + CALR chr19 13054351 + Exonic hg19 COAD TCGA-F4-6809-01A 13 129 In-Frame Intra-chr p13.13 p13.13 Seq+ 25735 ChimerSeq STARFusion TCGA_RNA-Seq FUS-PYCARD FUS chr16 31193743 + PYCARD chr16 31213524 - Exonic hg19 COAD TCGA-F4-6809-01A 2 116 Out-of-frame Intra-chr p11.2 Tumor suppressor gene p11.2 Tumor suppressor gene Seq+ 25736 ChimerSeq STARFusion TCGA_RNA-Seq CCAT1-CASC8 CCAT1 chr8 128231055 - CASC8 chr8 128302305 - Exonic hg19 COAD TCGA-F4-6809-01A 3 18 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 25737 ChimerSeq STARFusion TCGA_RNA-Seq MKLN1-ST7 MKLN1 chr7 131084192 + ST7 chr7 116829375 + Exonic hg19 COAD TCGA-AA-3521-01A 3 0 In-Frame Intra-chr q32.3 q31.2 Tumor suppressor gene 25738 ChimerSeq STARFusion TCGA_RNA-Seq RBCK1-SLC38A10 RBCK1 chr20 400375 + SLC38A10 chr17 79220861 - Exonic hg19 COAD TCGA-CM-6680-01A 2 0 Out-of-frame Inter-chr p13 Transcription factor q25.3 25739 ChimerSeq STARFusion TCGA_RNA-Seq REL-KIAA1841 REL chr2 61145741 + KIAA1841 chr2 61343114 + Exonic hg19 COAD TCGA-D5-6932-01A 3 33 In-Frame Intra-chr p16.1 Oncogene Transcription factor p15 Seq+ 25740 ChimerSeq STARFusion TCGA_RNA-Seq MEX3C-MRO MEX3C chr18 48722937 - MRO chr18 48335774 - Exonic hg19 COAD TCGA-D5-6932-01A 5 8 CDS-5'UTR Intra-chr q21.2 q21.2 25741 ChimerSeq STARFusion TCGA_RNA-Seq MEX3C-MRO MEX3C chr18 48722937 - MRO chr18 48333220 - Exonic hg19 COAD TCGA-D5-6932-01A 2 8 Out-of-frame Intra-chr q21.2 q21.2 25742 ChimerSeq STARFusion TCGA_RNA-Seq LOC100129917-CPLX1 LOC100129917 chr4 775560 - CPLX1 chr4 780486 - Exonic hg19 COAD TCGA-D5-6932-01A 2 1 3'UTR-CDS Intra-chr p16.3 25743 ChimerSeq STARFusion TCGA_RNA-Seq BRCA1-FAM134C BRCA1 chr17 41199660 - FAM134C chr17 40739882 - Exonic hg19 COAD TCGA-A6-6652-01A 2 3 In-Frame Intra-chr q21.31 Oncogene Tumor suppressor gene Seq+ 25744 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-CEP95 CLTC chr17 57739004 + CEP95 chr17 62532720 + Exonic hg19 COAD TCGA-CA-5254-01A 43 235 In-Frame Intra-chr q23.1 q23.3 Seq+ 25745 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890980 - BCAR4 chr16 11914154 - Exonic hg19 COAD TCGA-CA-5254-01A 21 49 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 25746 ChimerSeq STARFusion TCGA_RNA-Seq MXI1-TMEM254 MXI1 chr10 111967840 + TMEM254 chr10 81841597 + Exonic hg19 COAD TCGA-CA-5254-01A 11 40 Out-of-frame Intra-chr q25.2 Tumor suppressor gene Transcription factor q22.3 Seq+ 25747 ChimerSeq STARFusion TCGA_RNA-Seq IFIT5-HK1 IFIT5 chr10 91174560 + HK1 chr10 71103583 + Exonic hg19 COAD TCGA-CA-5254-01A 10 10 Out-of-frame Intra-chr q23.31 q22.1 Seq+ 25748 ChimerSeq STARFusion TCGA_RNA-Seq GBF1-NT5C2 GBF1 chr10 104019873 + NT5C2 chr10 104866463 - Exonic hg19 COAD TCGA-CA-5254-01A 4 31 In-Frame Intra-chr q24.32 q24.33 Seq+ 25749 ChimerSeq STARFusion TCGA_RNA-Seq GTPBP10-CDK14 GTPBP10 chr7 89976088 + CDK14 chr7 90376996 + Exonic hg19 COAD TCGA-CA-5254-01A 5 14 In-Frame Intra-chr q21.13 q21.13 Seq+ 25750 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-MMP20 TMEM123 chr11 102319543 - MMP20 chr11 102464326 - Exonic hg19 COAD TCGA-CA-5254-01A 4 13 In-Frame Intra-chr q22.2 q22.2 Seq+ 25751 ChimerSeq STARFusion TCGA_RNA-Seq RICTOR-ISL1 RICTOR chr5 39074213 - ISL1 chr5 50680375 + Exonic hg19 COAD TCGA-CA-5254-01A 2 6 In-Frame Intra-chr p13.1 q11.1 Transcription factor Seq+ 25752 ChimerSeq STARFusion TCGA_RNA-Seq ARRDC1-EHMT1 ARRDC1 chr9 140509452 + EHMT1 chr9 140611078 + Exonic hg19 COAD TCGA-CA-5254-01A 2 1 In-Frame Intra-chr q34.3 q34.3 Seq+ 25753 ChimerSeq STARFusion TCGA_RNA-Seq TPPP-BRD9 TPPP chr5 693393 - BRD9 chr5 880004 - Exonic hg19 COAD TCGA-CA-5254-01A 2 1 5'UTR-CDS Intra-chr p15.33 p15.33 25754 ChimerSeq STARFusion TCGA_RNA-Seq EPG5-PSTPIP2 EPG5 chr18 43547143 - PSTPIP2 chr18 43604652 - Exonic hg19 COAD TCGA-AY-6197-01A 2 27 Out-of-frame Intra-chr q21.1 q21.1 25755 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-TARDBP IGH@ chr14 106877619 - TARDBP chr1 11082638 + Exonic hg19 COAD TCGA-A6-2674-01A 3 0 Out-of-frame Inter-chr 32.33 p36.22 25756 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-TYRO3 IGKC chr2 89156966 - TYRO3 chr15 41854865 + Exonic hg19 COAD TCGA-A6-2674-01A 3 0 Out-of-frame Inter-chr p11.2 q15.1 TK:Axl 25757 ChimerSeq STARFusion TCGA_RNA-Seq HCG4P3-ZNF536 HCG4P3 chr6 29974382 - ZNF536 chr19 31039209 + Exonic hg19 COAD TCGA-AA-3543-01A 4 0 Out-of-frame Inter-chr q12 Transcription factor 25758 ChimerSeq STARFusion TCGA_RNA-Seq TTYH2-ADIRF TTYH2 chr17 72227130 + ADIRF chr10 88730313 + Exonic hg19 COAD TCGA-AA-3543-01A 3 0 Out-of-frame Inter-chr q25.1 q23.2 25759 ChimerSeq STARFusion TCGA_RNA-Seq RNA5SP92-EEF1A1 RNA5SP92 chr2 33558018 + EEF1A1 chr6 74229184 - Exonic hg19 COAD TCGA-AA-A00W-01A 4 0 Out-of-frame Inter-chr p22.3 q13 Tumor suppressor gene 25760 ChimerSeq STARFusion TCGA_RNA-Seq CLTA-PKP3 CLTA chr9 36191214 + PKP3 chr11 397063 + Exonic hg19 COAD TCGA-AA-A00W-01A 3 0 Out-of-frame Inter-chr p13.3 p15.5 25761 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-AA-3841-01A 3 0 Out-of-frame Inter-chr p22.1 25762 ChimerSeq STARFusion TCGA_RNA-Seq CHN1-SUPT5H CHN1 chr2 175689174 - SUPT5H chr19 39936320 + Exonic hg19 COAD TCGA-AA-3841-01A 3 0 Out-of-frame Inter-chr q31.1 q13.2 25763 ChimerSeq STARFusion TCGA_RNA-Seq ST14-APLP2 ST14 chr11 130029955 + APLP2 chr11 129990601 + Exonic hg19 COAD TCGA-AA-3841-01A 2 0 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 25764 ChimerSeq STARFusion TCGA_RNA-Seq PSMD1-NHEJ1 PSMD1 chr2 232011070 + NHEJ1 chr2 220012517 - Exonic hg19 COAD TCGA-G4-6307-01A 10 82 In-Frame Intra-chr q37.1 q35 Seq+ 25765 ChimerSeq STARFusion TCGA_RNA-Seq PPM1D-BCAS3 PPM1D chr17 58734202 + BCAS3 chr17 59445688 + Exonic hg19 COAD TCGA-DM-A28H-01A 4 13 Out-of-frame Intra-chr q23.2 q23.2 25766 ChimerSeq STARFusion TCGA_RNA-Seq ARFGEF2-SULF2 ARFGEF2 chr20 47538547 + SULF2 chr20 46365686 - Exonic hg19 COAD TCGA-AA-3695-01A 12 0 In-Frame Intra-chr q13.13 q13.12 KB Pub Seq+ 25767 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-CA4 TANC2 chr17 61151375 + CA4 chr17 58232675 + Exonic hg19 COAD TCGA-AA-3695-01A 5 0 In-Frame Intra-chr q23.2 q23.1 25768 ChimerSeq STARFusion TCGA_RNA-Seq BEST1-MT2A BEST1 chr11 61732557 + MT2A chr16 56643281 + Exonic hg19 COAD TCGA-AA-3695-01A 4 0 Out-of-frame Inter-chr q12.3 q13 Tumor suppressor gene 25769 ChimerSeq STARFusion TCGA_RNA-Seq BBC3-FCGRT BBC3 chr19 47729834 - FCGRT chr19 50017139 + Exonic hg19 COAD TCGA-AA-3695-01A 3 0 In-Frame Intra-chr q13.32 Tumor suppressor gene q13.33 25770 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-MT2A FTH1 chr11 61734793 - MT2A chr16 56642535 + Exonic hg19 COAD TCGA-AA-3695-01A 3 0 Out-of-frame Inter-chr q12.3 q13 Tumor suppressor gene 25771 ChimerSeq STARFusion TCGA_RNA-Seq HAS1-TMEM158 HAS1 chr19 52222925 - TMEM158 chr3 45267020 - Exonic hg19 COAD TCGA-AA-3695-01A 3 0 Out-of-frame Inter-chr q13.41 p21.31 25772 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992064 + VMP1 chr17 57917129 + Exonic hg19 COAD TCGA-AA-3695-01A 3 0 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 25773 ChimerSeq STARFusion TCGA_RNA-Seq VPS13D-CSF3 VPS13D chr1 12571415 + CSF3 chr17 38173084 + Exonic hg19 COAD TCGA-AA-3695-01A 3 0 Out-of-frame Inter-chr p36.22 q21.1 25774 ChimerSeq STARFusion TCGA_RNA-Seq CLK3-MUC2 CLK3 chr15 74907758 + MUC2 chr11 1092784 + Exonic hg19 COAD TCGA-AA-A03F-01A 6 0 Out-of-frame Inter-chr q24.1 CMGC:CLK 25775 ChimerSeq STARFusion TCGA_RNA-Seq ACAP2-CKB ACAP2 chr3 195012452 - CKB chr14 103986552 - Exonic hg19 COAD TCGA-AA-A03F-01A 4 0 Out-of-frame Inter-chr q29 q32.33 25776 ChimerSeq STARFusion TCGA_RNA-Seq COA6-MRPL4 COA6 chr1 234509415 + MRPL4 chr19 10363324 + Exonic hg19 COAD TCGA-AA-A03F-01A 4 0 Out-of-frame Inter-chr q42.2 p13.2 25777 ChimerSeq STARFusion TCGA_RNA-Seq EEF1A1-BCL2L15 EEF1A1 chr6 74229074 - BCL2L15 chr1 114429941 - Exonic hg19 COAD TCGA-AA-A03F-01A 4 0 Out-of-frame Inter-chr q13 Tumor suppressor gene p13.2 25778 ChimerSeq STARFusion TCGA_RNA-Seq PVRL2-RHOB PVRL2 chr19 45385529 + RHOB chr2 20647408 + Exonic hg19 COAD TCGA-AA-A03F-01A 4 0 Out-of-frame Inter-chr p24.1 Tumor suppressor gene 25779 ChimerSeq STARFusion TCGA_RNA-Seq RBM47-MGAT4B RBM47 chr4 40440455 - MGAT4B chr5 179225395 - Exonic hg19 COAD TCGA-AA-A03F-01A 4 0 Out-of-frame Inter-chr p14 25780 ChimerSeq STARFusion TCGA_RNA-Seq RFWD2-TMEM259 RFWD2 chr1 176176134 - TMEM259 chr19 1010367 - Exonic hg19 COAD TCGA-AA-A03F-01A 4 0 Out-of-frame Inter-chr q25.2 Tumor suppressor gene p13.3 25781 ChimerSeq STARFusion TCGA_RNA-Seq ALDH2-CLIC1 ALDH2 chr12 112221082 + CLIC1 chr6 31698653 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q24.12 25782 ChimerSeq STARFusion TCGA_RNA-Seq ANP32B-FAM195A ANP32B chr9 100745853 + FAM195A chr16 697488 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q22.33 25783 ChimerSeq STARFusion TCGA_RNA-Seq ARAP1-CDK2AP2 ARAP1 chr11 72406109 - CDK2AP2 chr11 67274194 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Intra-chr q13.4 q13.2 25784 ChimerSeq STARFusion TCGA_RNA-Seq ARPC4-IGHA2 ARPC4 chr3 9848746 + IGHA2 chr14 106054187 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p25.3 25785 ChimerSeq STARFusion TCGA_RNA-Seq ATP5D-YBX1 ATP5D chr19 1241982 + YBX1 chr1 43159171 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p13.3 p34.2 Transcription factor 25786 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V0D1-PPDPF ATP6V0D1 chr16 67472476 - PPDPF chr20 62152631 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q22.1 q13.33 25787 ChimerSeq STARFusion TCGA_RNA-Seq BTF3-RPL35 BTF3 chr5 72794408 + RPL35 chr9 127620315 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q13.2 q33.3 25788 ChimerSeq STARFusion TCGA_RNA-Seq C19orf77-SLC25A3 C19orf77 chr19 3474531 - SLC25A3 chr12 98987855 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q23.1 25789 ChimerSeq STARFusion TCGA_RNA-Seq C1QBP-EFHD2 C1QBP chr17 5336362 - EFHD2 chr1 15756722 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p13.2 p36.21 25790 ChimerSeq STARFusion TCGA_RNA-Seq CA9-SLC22A18 CA9 chr9 35675897 + SLC22A18 chr11 2937944 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p13.3 p15.4 25791 ChimerSeq STARFusion TCGA_RNA-Seq CAPNS1-CCDC85C CAPNS1 chr19 36641204 + CCDC85C chr14 99981636 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q13.12 q32.2 25792 ChimerSeq STARFusion TCGA_RNA-Seq CDK19-REG4 CDK19 chr6 110932694 - REG4 chr1 120337077 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q21 p12 25793 ChimerSeq STARFusion TCGA_RNA-Seq CDX2-PLEC CDX2 chr13 28543259 - PLEC chr8 144992807 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q12.2 Tumor suppressor gene Transcription factor q24.3 25794 ChimerSeq STARFusion TCGA_RNA-Seq CORO1B-ACTG1 CORO1B chr11 67205622 - ACTG1 chr17 79477798 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q13.2 q25.3 25795 ChimerSeq STARFusion TCGA_RNA-Seq CORO2A-IGHG1 CORO2A chr9 100887031 - IGHG1 chr14 106209201 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q22.33 q32.33 25796 ChimerSeq STARFusion TCGA_RNA-Seq COX7C-STEAP3 COX7C chr5 85913940 + STEAP3 chr2 120022746 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q14.3 q14.2 25797 ChimerSeq STARFusion TCGA_RNA-Seq CPT1B-MUC2 CPT1B chr22 51016217 - MUC2 chr11 1096345 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q13.33 25798 ChimerSeq STARFusion TCGA_RNA-Seq CTSD-FAM213B CTSD chr11 1780778 - FAM213B chr1 2519844 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p15.5 25799 ChimerSeq STARFusion TCGA_RNA-Seq DCAF11-PROM2 DCAF11 chr14 24592587 + PROM2 chr2 95941986 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q12 q11.1 25800 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC21-MYH14 DNAJC21 chr5 34939024 + MYH14 chr19 50779391 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p13.2 q13.33 25801 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-TAGLN2 DNM2 chr19 10886491 + TAGLN2 chr1 159890160 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p13.2 q23.2 25802 ChimerSeq STARFusion TCGA_RNA-Seq DPP3-CDC42BPB DPP3 chr11 66276580 + CDC42BPB chr14 103398958 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q13.2 q32.32 25803 ChimerSeq STARFusion TCGA_RNA-Seq DPYSL2-GAS8 DPYSL2 chr8 26439574 + GAS8 chr16 90110439 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p21.2 q24.3 25804 ChimerSeq STARFusion TCGA_RNA-Seq DSP-C1orf106 DSP chr6 7585827 + C1orf106 chr1 200867557 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p24.3 Tumor suppressor gene q32.1 25805 ChimerSeq STARFusion TCGA_RNA-Seq FABP5P10-CLPTM1 FABP5P10 chr2 152043116 + CLPTM1 chr19 45496496 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q23.3 q13.32 25806 ChimerSeq STARFusion TCGA_RNA-Seq GATA6-ANPEP GATA6 chr18 19752149 + ANPEP chr15 90346709 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q11.2 Transcription factor q26.1 25807 ChimerSeq STARFusion TCGA_RNA-Seq GGA3-SNAPC2 GGA3 chr17 73234413 - SNAPC2 chr19 7987160 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q25.1 p13.2 Transcription factor 25808 ChimerSeq STARFusion TCGA_RNA-Seq GPBP1L1-IGHG2 GPBP1L1 chr1 46125882 - IGHG2 chr14 106110289 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p34.1 Transcription factor 25809 ChimerSeq STARFusion TCGA_RNA-Seq GSDMD-RANGAP1 GSDMD chr8 144644228 + RANGAP1 chr22 41648995 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 In-Frame Inter-chr q13.2 25810 ChimerSeq STARFusion TCGA_RNA-Seq GSTP1-C1orf63 GSTP1 chr11 67353919 + C1orf63 chr1 25570630 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q13.2 Tumor suppressor gene 25811 ChimerSeq STARFusion TCGA_RNA-Seq GUK1-EIF3H GUK1 chr1 228336522 + EIF3H chr8 117658739 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q42.13 q24.11 25812 ChimerSeq STARFusion TCGA_RNA-Seq HADHA-ABHD11 HADHA chr2 26414147 - ABHD11 chr7 73152755 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p23.3 q11.23 25813 ChimerSeq STARFusion TCGA_RNA-Seq IGHA1-AGRN IGHA1 chr14 106174699 - AGRN chr1 980755 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p36.33 25814 ChimerSeq STARFusion TCGA_RNA-Seq IGHA1-MUC2 IGHA1 chr14 106174434 - MUC2 chr11 1093248 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr 25815 ChimerSeq STARFusion TCGA_RNA-Seq IGHA1-TAF7 IGHA1 chr14 106173791 - TAF7 chr5 140698835 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q31.3 25816 ChimerSeq STARFusion TCGA_RNA-Seq IGHA2-RPL29 IGHA2 chr14 106054630 - RPL29 chr3 52027835 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p21.2 25817 ChimerSeq STARFusion TCGA_RNA-Seq INPP5D-KIAA1143 INPP5D chr2 234055053 + KIAA1143 chr3 44790487 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr 25818 ChimerSeq STARFusion TCGA_RNA-Seq JUNB-PCTP JUNB chr19 12903811 + PCTP chr17 53854432 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p13.13 Transcription factor q22 25819 ChimerSeq STARFusion TCGA_RNA-Seq JUP-KCNN4 JUP chr17 39913683 - KCNN4 chr19 44271836 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q21.2 Tumor suppressor gene q13.31 25820 ChimerSeq STARFusion TCGA_RNA-Seq KRT19-HMGCS2 KRT19 chr17 39680198 - HMGCS2 chr1 120295291 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q21.2 Tumor suppressor gene p12 25821 ChimerSeq STARFusion TCGA_RNA-Seq KRT8-CHPF KRT8 chr12 53298529 - CHPF chr2 220404710 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q13.13 q35 25822 ChimerSeq STARFusion TCGA_RNA-Seq KRT8-CWC25 KRT8 chr12 53291191 - CWC25 chr17 36958191 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q13.13 q12 25823 ChimerSeq STARFusion TCGA_RNA-Seq KRT8-ITPR3 KRT8 chr12 53293639 - ITPR3 chr6 33651858 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q13.13 p21.31 25824 ChimerSeq STARFusion TCGA_RNA-Seq KRT8-SURF4 KRT8 chr12 53298475 - SURF4 chr9 136228963 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q13.13 25825 ChimerSeq STARFusion TCGA_RNA-Seq LETM1-PPDPF LETM1 chr4 1816143 - PPDPF chr20 62153263 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p16.3 q13.33 25826 ChimerSeq STARFusion TCGA_RNA-Seq LGALS3BP-IGKC LGALS3BP chr17 76967886 - IGKC chr2 89157201 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q25.3 p11.2 25827 ChimerSeq STARFusion TCGA_RNA-Seq LRRC47-SCAF1 LRRC47 chr1 3698084 - SCAF1 chr19 50155374 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p36.32 q13.33 25828 ChimerSeq STARFusion TCGA_RNA-Seq MAP1LC3B-TMC8 MAP1LC3B chr16 87425998 + TMC8 chr17 76130990 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q24.2 q25.3 25829 ChimerSeq STARFusion TCGA_RNA-Seq MCCC2-EPS8L3 MCCC2 chr5 70953799 + EPS8L3 chr1 110293328 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q13.2 p13.3 25830 ChimerSeq STARFusion TCGA_RNA-Seq MRP63-PSAP MRP63 chr13 21751073 + PSAP chr10 73576138 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q22.1 25831 ChimerSeq STARFusion TCGA_RNA-Seq MUC2-ACTG1 MUC2 chr11 1097228 + ACTG1 chr17 79478462 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q25.3 25832 ChimerSeq STARFusion TCGA_RNA-Seq MYL12B-RPL18A MYL12B chr18 3277324 + RPL18A chr19 17973002 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p11.31 p13.11 25833 ChimerSeq STARFusion TCGA_RNA-Seq MYO18A-CALML4 MYO18A chr17 27400742 - CALML4 chr15 68486243 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q11.2 Oncogene q23 25834 ChimerSeq STARFusion TCGA_RNA-Seq MYO1A-NME2 MYO1A chr12 57424017 - NME2 chr17 49249000 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q13.3 Tumor suppressor gene q21.33 Transcription factor 25835 ChimerSeq STARFusion TCGA_RNA-Seq NDRG1-CCT7 NDRG1 chr8 134249528 - CCT7 chr2 73461412 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q24.22 Tumor suppressor gene p13.2 25836 ChimerSeq STARFusion TCGA_RNA-Seq NHP2-IGHA1 NHP2 chr5 177577915 - IGHA1 chr14 106174485 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q35.3 25837 ChimerSeq STARFusion TCGA_RNA-Seq P4HB-ACADVL P4HB chr17 79803581 - ACADVL chr17 7128321 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Intra-chr q25.3 p13.1 25838 ChimerSeq STARFusion TCGA_RNA-Seq PABPC1-RPLP0 PABPC1 chr8 101733796 - RPLP0 chr12 120636800 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q22.3 q24.23 25839 ChimerSeq STARFusion TCGA_RNA-Seq PDXDC1-ZFP36L1 PDXDC1 chr16 15130099 + ZFP36L1 chr14 69256201 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p13.11 q24.1 25840 ChimerSeq STARFusion TCGA_RNA-Seq PHB-UBA1 PHB chr17 47486701 - UBA1 chrX 47072435 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q21.33 Tumor suppressor gene p11.3 25841 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA6-ECE1 PLEKHA6 chr1 204214757 - ECE1 chr1 21545603 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Intra-chr q32.1 p36.12 25842 ChimerSeq STARFusion TCGA_RNA-Seq POR-FTL POR chr7 75615004 + FTL chr19 49469090 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q11.23 q13.33 25843 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R10-PDIA3 PPP1R10 chr6 30569831 - PDIA3 chr15 44055283 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q15.3 25844 ChimerSeq STARFusion TCGA_RNA-Seq PRR15-ATP5D PRR15 chr7 29606387 + ATP5D chr19 1241851 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p14.3 p13.3 25845 ChimerSeq STARFusion TCGA_RNA-Seq PSMD9-PTMA PSMD9 chr12 122354254 + PTMA chr2 232573407 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q24.31 q37.1 25846 ChimerSeq STARFusion TCGA_RNA-Seq RAB13-ACTB RAB13 chr1 153954560 - ACTB chr7 5568964 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q21.3 p22.1 25847 ChimerSeq STARFusion TCGA_RNA-Seq REG4-ANXA2 REG4 chr1 120336788 - ANXA2 chr15 60639687 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p12 q22.2 25848 ChimerSeq STARFusion TCGA_RNA-Seq RPAP1-IGHA1 RPAP1 chr15 41813227 - IGHA1 chr14 106174485 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q15.1 25849 ChimerSeq STARFusion TCGA_RNA-Seq RPL23A-IGHA1 RPL23A chr17 27049897 + IGHA1 chr14 106174988 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q11.2 25850 ChimerSeq STARFusion TCGA_RNA-Seq RPL37-GTF2F1 RPL37 chr5 40834635 - GTF2F1 chr19 6379955 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p13.1 p13.3 25851 ChimerSeq STARFusion TCGA_RNA-Seq SEC16A-CSTB SEC16A chr9 139335089 - CSTB chr21 45194026 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q34.3 q22.3 25852 ChimerSeq STARFusion TCGA_RNA-Seq SFPQ-KRT8 SFPQ chr1 35658475 - KRT8 chr12 53291224 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p34.3 q13.13 25853 ChimerSeq STARFusion TCGA_RNA-Seq SIRT7-C20orf24 SIRT7 chr17 79873351 - C20orf24 chr20 35234266 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q25.3 q11.23 25854 ChimerSeq STARFusion TCGA_RNA-Seq SIRT7-SPTBN1 SIRT7 chr17 79870248 - SPTBN1 chr2 54895559 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q25.3 p16.2 Tumor suppressor gene 25855 ChimerSeq STARFusion TCGA_RNA-Seq SNHG7-PIGR SNHG7 chr9 139622445 - PIGR chr1 207107900 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q34.3 q32.1 25856 ChimerSeq STARFusion TCGA_RNA-Seq STXBP2-AP2M1 STXBP2 chr19 7709605 + AP2M1 chr3 183896662 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p13.2 q27.1 25857 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D16-CKB TBC1D16 chr17 77912194 - CKB chr14 103987748 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q25.3 q32.33 25858 ChimerSeq STARFusion TCGA_RNA-Seq TFIP11-CAPNS1 TFIP11 chr22 26895439 - CAPNS1 chr19 36640721 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q12.1 q13.12 25859 ChimerSeq STARFusion TCGA_RNA-Seq TIAF1-CALML4 TIAF1 chr17 27400742 - CALML4 chr15 68486243 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q11.2 Oncogene q23 25860 ChimerSeq STARFusion TCGA_RNA-Seq TMEM106C-MLXIP TMEM106C chr12 48359113 + MLXIP chr12 122629969 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Intra-chr q13.11 Transcription factor 25861 ChimerSeq STARFusion TCGA_RNA-Seq TMEM2-OLFM4 TMEM2 chr9 74299438 - OLFM4 chr13 53625628 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q21.13 q14.3 Tumor suppressor gene 25862 ChimerSeq STARFusion TCGA_RNA-Seq TNFRSF1B-CLPTM1 TNFRSF1B chr1 12268393 + CLPTM1 chr19 45496514 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p36.22 q13.32 25863 ChimerSeq STARFusion TCGA_RNA-Seq TRIM28-KIAA1191 TRIM28 chr19 59060874 + KIAA1191 chr5 175775312 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q13.43 q35.2 25864 ChimerSeq STARFusion TCGA_RNA-Seq TRMT61A-CKB TRMT61A chr14 104001998 + CKB chr14 103986849 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Intra-chr q32.33 q32.33 25865 ChimerSeq STARFusion TCGA_RNA-Seq TRPM4-PCBP2 TRPM4 chr19 49700071 + PCBP2 chr12 53873220 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr q13.33 q13.13 25866 ChimerSeq STARFusion TCGA_RNA-Seq UBL5-TKT UBL5 chr19 9939348 + TKT chr3 53260896 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p13.2 Tumor suppressor gene p21.1 Tumor suppressor gene 25867 ChimerSeq STARFusion TCGA_RNA-Seq VCP-FAM115A VCP chr9 35060385 - FAM115A chr7 143560144 - Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p13.3 25868 ChimerSeq STARFusion TCGA_RNA-Seq VILL-THOP1 VILL chr3 38040886 + THOP1 chr19 2811639 + Exonic hg19 COAD TCGA-AA-A03F-01A 3 0 Out-of-frame Inter-chr p22.2 p13.3 25869 ChimerSeq STARFusion TCGA_RNA-Seq TRRAP-ASNS TRRAP chr7 98557113 + ASNS chr7 97493808 - Exonic hg19 COAD TCGA-AY-4070-01A 27 0 In-Frame Intra-chr q22.1 Atypical:PIKK Oncogene q21.3 Seq+ 25870 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-LRTOMT IGH@ chr14 106518398 - LRTOMT chr11 71791639 + Exonic hg19 COAD TCGA-AY-4070-01A 15 0 Out-of-frame Inter-chr 32.33 q13.4 25871 ChimerSeq STARFusion TCGA_RNA-Seq CDS2-SIRPB1 CDS2 chr20 5163746 + SIRPB1 chr20 1544674 - Exonic hg19 COAD TCGA-AY-4070-01A 14 0 Out-of-frame Intra-chr p12.3 p13 25872 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-LRTOMT IGH@ chr14 106573231 - LRTOMT chr11 71791639 + Exonic hg19 COAD TCGA-AY-4070-01A 11 0 Out-of-frame Inter-chr 32.33 q13.4 25873 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-LRTOMT IGH@ chr14 106725199 - LRTOMT chr11 71791639 + Exonic hg19 COAD TCGA-AY-4070-01A 8 0 Out-of-frame Inter-chr 32.33 q13.4 25874 ChimerSeq STARFusion TCGA_RNA-Seq ZPBP2-IKZF3 ZPBP2 chr17 38029379 + IKZF3 chr17 37988404 - Exonic hg19 COAD TCGA-AY-4070-01A 8 0 Out-of-frame Intra-chr q21.1 q21.1 Tumor suppressor gene Transcription factor 25875 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-LRTOMT IGH@ chr14 107048670 - LRTOMT chr11 71791639 + Exonic hg19 COAD TCGA-AY-4070-01A 7 0 Out-of-frame Inter-chr 32.33 q13.4 25876 ChimerSeq STARFusion TCGA_RNA-Seq IKZF3-RARA IKZF3 chr17 37944511 - RARA chr17 38487109 + Exonic hg19 COAD TCGA-AY-4070-01A 6 0 CDS-5'UTR Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.2 Oncogene Transcription factor 25877 ChimerSeq STARFusion TCGA_RNA-Seq FAM208B-APBB1IP FAM208B chr10 5727138 + APBB1IP chr10 26785233 + Exonic hg19 COAD TCGA-AY-4070-01A 4 0 5'UTR-CDS Intra-chr p15.1 p12.1 25878 ChimerSeq STARFusion TCGA_RNA-Seq NF1-ZPBP2 NF1 chr17 29509683 + ZPBP2 chr17 38029297 + Exonic hg19 COAD TCGA-AY-4070-01A 4 0 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q21.1 Seq+ 25879 ChimerSeq STARFusion TCGA_RNA-Seq TCN2-THOC5 TCN2 chr22 31010488 + THOC5 chr22 29908125 - Exonic hg19 COAD TCGA-AD-6965-01A 6 10 In-Frame Intra-chr q12.2 q12.2 Seq+ 25880 ChimerSeq STARFusion TCGA_RNA-Seq VTI1A-TCF7L2 VTI1A chr10 114224416 + TCF7L2 chr10 114900943 + Exonic hg19 COAD TCGA-AD-6965-01A 2 10 In-Frame Intra-chr q25.2 q25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 25881 ChimerSeq STARFusion TCGA_RNA-Seq PDE4C-KIAA1683 PDE4C chr19 18343760 - KIAA1683 chr19 18368916 - Exonic hg19 COAD TCGA-D5-6541-01A 13 47 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 25882 ChimerSeq STARFusion TCGA_RNA-Seq SPPL2B-TCF25 SPPL2B chr19 2334720 + TCF25 chr16 89976999 + Exonic hg19 COAD TCGA-D5-6541-01A 3 1 Out-of-frame Inter-chr p13.3 q24.3 25883 ChimerSeq STARFusion TCGA_RNA-Seq FAM122B-KLK1 FAM122B chrX 133931151 - KLK1 chr19 51323699 - Exonic hg19 COAD TCGA-D5-6541-01A 2 2 5'UTR-CDS Inter-chr q26.3 q13.33 25884 ChimerSeq STARFusion TCGA_RNA-Seq TCF25-ZNF276 TCF25 chr16 89973730 + ZNF276 chr16 89799710 + Exonic hg19 COAD TCGA-D5-6541-01A 2 2 In-Frame Intra-chr q24.3 q24.3 Transcription factor 25885 ChimerSeq STARFusion TCGA_RNA-Seq MTMR2-MMP8 MTMR2 chr11 95647406 - MMP8 chr11 102595734 - Exonic hg19 COAD TCGA-G4-6317-01A 24 75 5'UTR-5'UTR Intra-chr q21 q22.2 Seq+ 25886 ChimerSeq STARFusion TCGA_RNA-Seq MTMR2-MMP8 MTMR2 chr11 95647406 - MMP8 chr11 102597823 - Exonic hg19 COAD TCGA-G4-6317-01A 4 74 5'UTR-5'UTR Intra-chr q21 q22.2 Seq+ 25887 ChimerSeq STARFusion TCGA_RNA-Seq MTMR2-MMP8 MTMR2 chr11 95657039 - MMP8 chr11 102595734 - Exonic hg19 COAD TCGA-G4-6317-01A 4 74 5'UTR-5'UTR Intra-chr q21 q22.2 Seq+ 25888 ChimerSeq STARFusion TCGA_RNA-Seq RPS19-CYBA RPS19 chr19 42373284 + CYBA chr16 88709928 - Exonic hg19 COAD TCGA-AA-3548-01A 3 0 Out-of-frame Inter-chr q13.2 q24.2 25889 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31832842 - Exonic hg19 COAD TCGA-AA-3548-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 25890 ChimerSeq STARFusion TCGA_RNA-Seq SH3RF1-SPOCK3 SH3RF1 chr4 170057469 - SPOCK3 chr4 167810395 - Exonic hg19 COAD TCGA-AZ-6607-01A 8 22 In-Frame Intra-chr q33 q32.3 Seq+ 25891 ChimerSeq STARFusion TCGA_RNA-Seq BRF2-C8orf86 BRF2 chr8 37706114 - C8orf86 chr8 38370157 - Exonic hg19 COAD TCGA-AZ-6607-01A 3 12 Out-of-frame Intra-chr p11.23 Tumor suppressor gene Transcription factor p11.22 Seq+ 25892 ChimerSeq STARFusion TCGA_RNA-Seq CCDC64-KCNK1 CCDC64 chr12 120436540 + KCNK1 chr1 233802341 + Exonic hg19 COAD TCGA-AZ-6607-01A 3 3 Out-of-frame Inter-chr q42.2 25893 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R5C-LINC00334 PPP2R5C chr14 102229307 + LINC00334 chr21 46678366 + Exonic hg19 COAD TCGA-AZ-6607-01A 2 4 Out-of-frame Inter-chr q32.31 Tumor suppressor gene q22.3 25894 ChimerSeq STARFusion TCGA_RNA-Seq MED12L-FABP4 MED12L chr3 150959656 + FABP4 chr8 82392833 - Exonic hg19 COAD TCGA-AA-3680-01A 5 0 Out-of-frame Inter-chr q25.1 q21.13 25895 ChimerSeq STARFusion TCGA_RNA-Seq TUBA1B-KCNJ3 TUBA1B chr12 49521575 - KCNJ3 chr2 155714393 + Exonic hg19 COAD TCGA-AA-3680-01A 3 0 Out-of-frame Inter-chr q13.12 q24.1 25896 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-ELK2AP GAS6 chr13 114525072 - ELK2AP chr14 106136184 - Exonic hg19 COAD TCGA-CM-6679-01A 3 0 Out-of-frame Inter-chr q34 Oncogene 25897 ChimerSeq STARFusion TCGA_RNA-Seq TANC1-MARCH7 TANC1 chr2 159857701 + 2019_ 3_ 7_ chr2 160585520 + Exonic hg19 COAD TCGA-AD-6895-01A 3 6 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 25898 ChimerSeq STARFusion TCGA_RNA-Seq MIPEP-MYO16 MIPEP chr13 24380089 - MYO16 chr13 109507791 + Exonic hg19 COAD TCGA-DM-A28F-01A 5 29 In-Frame Intra-chr q12.12 Seq+ 25899 ChimerSeq STARFusion TCGA_RNA-Seq PIP5K1B-FXN PIP5K1B chr9 71320678 + FXN chr9 71714817 + Exonic hg19 COAD TCGA-DM-A28F-01A 7 16 5'UTR-CDS Intra-chr q21.11 q21.11 Tumor suppressor gene Seq+ 25900 ChimerSeq STARFusion TCGA_RNA-Seq PIP5K1B-FXN PIP5K1B chr9 71357573 + FXN chr9 71714817 + Exonic hg19 COAD TCGA-DM-A28F-01A 2 16 5'UTR-CDS Intra-chr q21.11 q21.11 Tumor suppressor gene Seq+ 25901 ChimerSeq STARFusion TCGA_RNA-Seq BPNT1-RAB3GAP2 BPNT1 chr1 220263028 - RAB3GAP2 chr1 220327399 - Exonic hg19 COAD TCGA-DM-A28F-01A 2 12 5'UTR-CDS Intra-chr q41 q41 Seq+ 25902 ChimerSeq STARFusion TCGA_RNA-Seq PROSER1-MIPEP PROSER1 chr13 39603418 - MIPEP chr13 24444334 - Exonic hg19 COAD TCGA-DM-A28F-01A 2 10 Out-of-frame Intra-chr q13.3 q12.12 Seq+ 25903 ChimerSeq STARFusion TCGA_RNA-Seq AGBL4-FAF1 AGBL4 chr1 50489435 - FAF1 chr1 51323669 - Exonic hg19 COAD TCGA-DM-A28F-01A 2 1 Out-of-frame Intra-chr p33 p32.3 Seq+ 25904 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128841404 - RSPO3 chr6 127469793 + Exonic hg19 COAD TCGA-CA-5255-01A 12 42 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 25905 ChimerSeq STARFusion TCGA_RNA-Seq SNORA50-CNOT1 SNORA50 chr16 58593708 - CNOT1 chr16 58594266 - Exonic hg19 COAD TCGA-A6-2684-01A 4 2 3'UTR-CDS Intra-chr q23.3 q21 25906 ChimerSeq STARFusion TCGA_RNA-Seq SH3BP4-SNED1 SH3BP4 chr2 235860814 + SNED1 chr2 241973152 + Exonic hg19 COAD TCGA-A6-2684-01A 2 3 5'UTR-CDS Intra-chr q37.2 q37.3 Seq+ 25907 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHM3-MAP2 PLEKHM3 chr2 208890113 - MAP2 chr2 210489777 + Exonic hg19 COAD TCGA-DM-A1D0-01A 2 9 5'UTR-5'UTR Intra-chr q33.3 q34 Seq+ 25908 ChimerSeq STARFusion TCGA_RNA-Seq NDRG3-BCAS4 NDRG3 chr20 35310921 - BCAS4 chr20 49434748 + Exonic hg19 COAD TCGA-DM-A1D0-01A 2 5 In-Frame Intra-chr q11.23 q13.13 Seq+ 25909 ChimerSeq STARFusion TCGA_RNA-Seq YWHAB-BCL2L1 YWHAB chr20 43514527 + BCL2L1 chr20 30310133 - Exonic hg19 COAD TCGA-A6-2675-01A 5 31 5'UTR-5'UTR Intra-chr q13.12 q11.21 Oncogene Seq+ 25910 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF4-COMMD7 TM9SF4 chr20 30749168 + COMMD7 chr20 31315949 - Exonic hg19 COAD TCGA-A6-2675-01A 2 23 In-Frame Intra-chr q11.21 q11.21 Seq+ 25911 ChimerSeq STARFusion TCGA_RNA-Seq RALGAPB-ITCH RALGAPB chr20 37199490 + ITCH chr20 33000321 + Exonic hg19 COAD TCGA-A6-2675-01A 2 4 In-Frame Intra-chr q11.23 q11.22 Seq+ 25912 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-CNN1 DNM2 chr19 10934575 + CNN1 chr19 11649701 + Exonic hg19 COAD TCGA-AA-3666-01A 11 0 CDS-5'UTR Intra-chr p13.2 p13.2 Tumor suppressor gene 25913 ChimerSeq STARFusion TCGA_RNA-Seq C1GALT1-RSPH10B C1GALT1 chr7 7222451 + RSPH10B chr7 5992850 - Exonic hg19 COAD TCGA-AA-3666-01A 7 0 5'UTR-5'UTR Intra-chr p22.1 p22.1 25914 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-CNN1 DNM2 chr19 10934575 + CNN1 chr19 11651891 + Exonic hg19 COAD TCGA-AA-3666-01A 3 0 In-Frame Intra-chr p13.2 p13.2 Tumor suppressor gene 25915 ChimerSeq STARFusion TCGA_RNA-Seq ITCH-PIGU ITCH chr20 33077731 + PIGU chr20 33148783 - Exonic hg19 COAD TCGA-G4-6303-01A 9 59 In-Frame Intra-chr q11.22 q11.22 Seq+ 25916 ChimerSeq STARFusion TCGA_RNA-Seq MED14-SRPX MED14 chrX 40547706 - SRPX chrX 38009147 - Exonic hg19 COAD TCGA-F4-6459-01A 19 80 In-Frame Intra-chr p11.4 p11.4 Tumor suppressor gene Seq+ 25917 ChimerSeq STARFusion TCGA_RNA-Seq CDK13-C7orf10 CDK13 chr7 40087476 + C7orf10 chr7 40488886 + Exonic hg19 COAD TCGA-F4-6459-01A 3 19 Out-of-frame Intra-chr p14.1 Seq+ 25918 ChimerSeq STARFusion TCGA_RNA-Seq ZNF717-FOXP1 ZNF717 chr3 75832457 - FOXP1 chr3 71542706 - Exonic hg19 COAD TCGA-F4-6459-01A 3 5 CDS-5'UTR Intra-chr p12.3 Transcription factor p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 25919 ChimerSeq STARFusion TCGA_RNA-Seq PROSC-CHMP1A PROSC chr8 37623873 + CHMP1A chr16 89713739 - Exonic hg19 COAD TCGA-F4-6459-01A 2 0 In-Frame Inter-chr q24.3 Seq+ 25920 ChimerSeq STARFusion TCGA_RNA-Seq THRA-MED24 THRA chr17 38241068 + MED24 chr17 38192407 - Exonic hg19 COAD TCGA-AA-A02O-01A 23 0 In-Frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Seq+ 25921 ChimerSeq STARFusion TCGA_RNA-Seq ITGB4-KRT18 ITGB4 chr17 73732235 + KRT18 chr12 53345903 + Exonic hg19 COAD TCGA-G4-6293-01A 2 1 In-Frame Inter-chr q25.1 q13.13 25922 ChimerSeq STARFusion TCGA_RNA-Seq HEPHL1-PANX1 HEPHL1 chr11 93800909 + PANX1 chr11 93862494 + Exonic hg19 COAD TCGA-AA-A02R-01A 3 0 Out-of-frame Intra-chr q21 q21 25923 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-ADAM18 WHSC1L1 chr8 38137058 - ADAM18 chr8 39587417 + Exonic hg19 COAD TCGA-D5-6926-01A 74 103 Out-of-frame Intra-chr p11.23 Tumor suppressor gene Seq+ 25924 ChimerSeq STARFusion TCGA_RNA-Seq SFXN1-CPLX2 SFXN1 chr5 174919270 + CPLX2 chr5 175305655 + Exonic hg19 COAD TCGA-DM-A1DA-01A 5 17 CDS-5'UTR Intra-chr q35.2 q35.2 Seq+ 25925 ChimerSeq STARFusion TCGA_RNA-Seq GPX1P1-SP8 GPX1P1 chrX 13397444 - SP8 chr7 20824974 - Exonic hg19 COAD TCGA-AA-3851-01A 3 0 Out-of-frame Inter-chr p22.2 p21.1 Transcription factor 25926 ChimerSeq STARFusion TCGA_RNA-Seq TIMM23B-LINC00843 TIMM23B chr10 51387763 + LINC00843 chr10 51732772 + Exonic hg19 COAD TCGA-CM-4744-01A 4 15 Out-of-frame Intra-chr q11.23 q11.23 25927 ChimerSeq STARFusion TCGA_RNA-Seq LRP8-RPL14 LRP8 chr1 53793512 - RPL14 chr3 40503543 + Exonic hg19 COAD TCGA-CM-4744-01A 3 6 Out-of-frame Inter-chr p32.3 p22.1 25928 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-PITPNA YWHAE chr17 1303341 - PITPNA chr17 1424939 - Exonic hg19 COAD TCGA-AZ-4614-01A 72 182 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 25929 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-INPP5K YWHAE chr17 1303341 - INPP5K chr17 1417273 - Exonic hg19 COAD TCGA-AZ-4614-01A 35 110 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 25930 ChimerSeq STARFusion TCGA_RNA-Seq CEP85-STX12 CEP85 chr1 26566329 + STX12 chr1 28116073 + Exonic hg19 COAD TCGA-AZ-4614-01A 2 30 In-Frame Intra-chr p36.11 p35.3 Seq+ 25931 ChimerSeq STARFusion TCGA_RNA-Seq REPS2-TXLNG REPS2 chrX 17047746 + TXLNG chrX 16859551 + Exonic hg19 COAD TCGA-AZ-4614-01A 2 10 In-Frame Intra-chr p22.2 p22.2 Seq+ 25932 ChimerSeq STARFusion TCGA_RNA-Seq KIF26B-SMYD3 KIF26B chr1 245704252 + SMYD3 chr1 245927451 - Exonic hg19 COAD TCGA-AZ-4614-01A 2 1 Out-of-frame Intra-chr q44 Transcription factor Seq+ 25933 ChimerSeq STARFusion TCGA_RNA-Seq MSL1-AFMID MSL1 chr17 38282659 + AFMID chr17 76198580 + Exonic hg19 COAD TCGA-AA-3679-01A 8 0 Out-of-frame Intra-chr q21.1 q25.3 Seq+ 25934 ChimerSeq STARFusion TCGA_RNA-Seq TOP1-EYA2 TOP1 chr20 39729993 + EYA2 chr20 45630067 + Exonic hg19 COAD TCGA-AA-3679-01A 3 0 Out-of-frame Intra-chr q12 Oncogene q13.12 25935 ChimerSeq STARFusion TCGA_RNA-Seq YWHAH-TMSB10 YWHAH chr22 32341061 + TMSB10 chr2 85133629 + Exonic hg19 COAD TCGA-A6-3808-01A 5 0 Out-of-frame Inter-chr q12.3 p11.2 25936 ChimerSeq STARFusion TCGA_RNA-Seq C5orf45-VAPA C5orf45 chr5 179263578 - VAPA chr18 9914049 + Exonic hg19 COAD TCGA-A6-3808-01A 3 0 Out-of-frame Inter-chr p11.22 25937 ChimerSeq STARFusion TCGA_RNA-Seq GPI-CACNA1G GPI chr19 34868483 + CACNA1G chr17 48653386 + Exonic hg19 COAD TCGA-A6-3808-01A 3 0 Out-of-frame Inter-chr q21.33 25938 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-TYRO3 IGKC chr2 89156966 - TYRO3 chr15 41854865 + Exonic hg19 COAD TCGA-A6-3808-01A 3 0 Out-of-frame Inter-chr p11.2 q15.1 TK:Axl 25939 ChimerSeq STARFusion TCGA_RNA-Seq RFX3-TFDP1 RFX3 chr9 3525747 - TFDP1 chr13 114265311 + Exonic hg19 COAD TCGA-D5-6536-01A 7 29 5'UTR-5'UTR Inter-chr p24.2 Transcription factor q34 Transcription factor Seq+ 25940 ChimerSeq STARFusion TCGA_RNA-Seq TRIM36-MCTP1 TRIM36 chr5 114480295 - MCTP1 chr5 94353188 - Exonic hg19 COAD TCGA-DM-A280-01A 2 5 In-Frame Intra-chr q22.3 q15 Seq+ 25941 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-TMEM255B GAS6 chr13 114538486 - TMEM255B chr13 114514709 + Exonic hg19 COAD TCGA-D5-6532-01A 2 10 Out-of-frame Intra-chr q34 Oncogene 25942 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 COAD TCGA-AZ-4313-01A 2 1 In-Frame Intra-chr p11.21 p11.21 25943 ChimerSeq STARFusion TCGA_RNA-Seq TMEM241-TEX101 TMEM241 chr18 20936558 - TEX101 chr19 43906918 + Exonic hg19 COAD TCGA-AZ-4313-01A 2 0 CDS-5'UTR Inter-chr q11.2 q13.31 25944 ChimerSeq STARFusion TCGA_RNA-Seq GBE1-LONRF1 GBE1 chr3 81754595 - LONRF1 chr8 12600791 - Exonic hg19 COAD TCGA-AA-A01C-01A 2 0 In-Frame Inter-chr p12.2 p23.1 25945 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-AA-3519-01A 4 0 Out-of-frame Inter-chr p22.1 25946 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128841404 - RSPO3 chr6 127469793 + Exonic hg19 COAD TCGA-D5-6539-01A 14 101 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 25947 ChimerSeq STARFusion TCGA_RNA-Seq LOC100131067-PGAP1 LOC100131067 chr5 80597106 - PGAP1 chr2 197763093 - Exonic hg19 COAD TCGA-A6-6137-01A 4 5 3'UTR-CDS Inter-chr q33.1 25948 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-DPYSL2 ZBTB20 chr3 114412375 - DPYSL2 chr8 26492296 + Exonic hg19 COAD TCGA-A6-6137-01A 2 7 5'UTR-CDS Inter-chr q13.31 Transcription factor p21.2 Seq+ 25949 ChimerSeq STARFusion TCGA_RNA-Seq PTPRM-ELP4 PTPRM chr18 8143777 + ELP4 chr11 31804941 + Exonic hg19 COAD TCGA-DM-A1D6-01A 2 20 Out-of-frame Inter-chr p11.23 p13 Seq+ 25950 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPA2B1-CAPN8 HNRNPA2B1 chr7 26240192 - CAPN8 chr1 223718212 - Exonic hg19 COAD TCGA-DM-A1D6-01A 2 1 In-Frame Inter-chr p15.2 q41 25951 ChimerSeq STARFusion TCGA_RNA-Seq NADK-IGKC NADK chr1 1689914 - IGKC chr2 89161433 - Exonic hg19 COAD TCGA-AA-3856-01A 11 0 Out-of-frame Inter-chr p36.33 p11.2 25952 ChimerSeq STARFusion TCGA_RNA-Seq NADK-IGKJ1 NADK chr1 1689914 - IGKJ1 chr2 89161433 - Exonic hg19 COAD TCGA-AA-3856-01A 11 0 Out-of-frame Inter-chr p36.33 p11.2 25953 ChimerSeq STARFusion TCGA_RNA-Seq RUNX1-PROS1 RUNX1 chr21 36206707 - PROS1 chr3 93646251 - Exonic hg19 COAD TCGA-A6-6654-01A 7 31 In-Frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q11.1 Seq+ 25954 ChimerSeq STARFusion TCGA_RNA-Seq GMDS-EEF1E1 GMDS chr6 2116005 - EEF1E1 chr6 8097700 - Exonic hg19 COAD TCGA-A6-6654-01A 2 0 In-Frame Intra-chr p25.3 p24.3 Tumor suppressor gene 25955 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1D-SECTM1 CSNK1D chr17 80223562 - SECTM1 chr17 80280887 - Exonic hg19 COAD TCGA-AZ-6601-01A 11 36 In-Frame Intra-chr q25.3 q25.3 Seq+ 25956 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1D-SECTM1 CSNK1D chr17 80223562 - SECTM1 chr17 80280246 - Exonic hg19 COAD TCGA-AZ-6601-01A 2 36 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 25957 ChimerSeq STARFusion TCGA_RNA-Seq MAP7-OPRM1 MAP7 chr6 136732758 - OPRM1 chr6 154394650 + Exonic hg19 COAD TCGA-F4-6854-01A 2 8 5'UTR-5'UTR Intra-chr q23.3 q25.2 Seq+ 25958 ChimerSeq STARFusion TCGA_RNA-Seq YWHAH-TMSB10 YWHAH chr22 32341061 + TMSB10 chr2 85133629 + Exonic hg19 COAD TCGA-AA-3877-01A 5 0 Out-of-frame Inter-chr q12.3 p11.2 25959 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-AA-3877-01A 3 0 Out-of-frame Inter-chr p22.1 25960 ChimerSeq STARFusion TCGA_RNA-Seq LOC646329-KIAA0196 LOC646329 chr7 130569076 - KIAA0196 chr8 126096264 - Exonic hg19 COAD TCGA-D5-7000-01A 2 12 3'UTR-5'UTR Inter-chr 25961 ChimerSeq STARFusion TCGA_RNA-Seq HTATSF1-BRS3 HTATSF1 chrX 135586622 + BRS3 chrX 135572292 + Exonic hg19 COAD TCGA-CK-5915-01A 12 47 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 25962 ChimerSeq STARFusion TCGA_RNA-Seq MVP-TMEM219 MVP chr16 29831831 + TMEM219 chr16 29979346 + Exonic hg19 COAD TCGA-CK-5915-01A 15 8 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 25963 ChimerSeq STARFusion TCGA_RNA-Seq PAGR1-TMEM219 PAGR1 chr16 29831831 + TMEM219 chr16 29979346 + Exonic hg19 COAD TCGA-CK-5915-01A 15 8 Out-of-frame Intra-chr p11.2 p11.2 25964 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-RMRP RNA45S5 chrUn_gl000220 118607 + RMRP chr9 35657959 - Exonic hg19 COAD TCGA-A6-6650-01B 3 7 Out-of-frame Inter-chr p13.3 25965 ChimerSeq STARFusion TCGA_RNA-Seq DEAF1-HRAS DEAF1 chr11 680963 - HRAS chr11 532755 - Exonic hg19 COAD TCGA-AD-6888-01A 13 64 Out-of-frame Intra-chr Transcription factor p15.5 Oncogene Seq+ 25966 ChimerSeq STARFusion TCGA_RNA-Seq DEAF1-HRAS DEAF1 chr11 684898 - HRAS chr11 532755 - Exonic hg19 COAD TCGA-AD-6888-01A 2 64 In-Frame Intra-chr Transcription factor p15.5 Oncogene Seq+ 25967 ChimerSeq STARFusion TCGA_RNA-Seq PRR7-GNB2L1 PRR7 chr5 176873961 + GNB2L1 chr5 180669345 - Exonic hg19 COAD TCGA-AA-3542-01A 14 0 5'UTR-CDS Intra-chr q35.3 Tumor suppressor gene 25968 ChimerSeq STARFusion TCGA_RNA-Seq PI4KA-IGL@ PI4KA chr22 21212858 - IGL@ chr22 22749523 + Exonic hg19 COAD TCGA-AA-3542-01A 10 0 Out-of-frame Intra-chr q11.21 q11.22 25969 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-ETV5 TPT1 chr13 45914888 - ETV5 chr3 185826703 - Exonic hg19 COAD TCGA-AA-3542-01A 5 0 Out-of-frame Inter-chr q14.13 q27.2 Oncogene Transcription factor 25970 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-NEU1 ZBTB12 chr6 31868872 - NEU1 chr6 31827102 - Exonic hg19 COAD TCGA-AA-3542-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 25971 ChimerSeq STARFusion TCGA_RNA-Seq ZFX-GLYATL2 ZFX chrX 24170947 + GLYATL2 chr11 58611997 - Exonic hg19 COAD TCGA-CM-6172-01A 33 153 5'UTR-5'UTR Inter-chr p22.11 Transcription factor q12.1 Seq+ 25972 ChimerSeq STARFusion TCGA_RNA-Seq ZFX-GLYATL2 ZFX chrX 24167911 + GLYATL2 chr11 58611997 - Exonic hg19 COAD TCGA-CM-6172-01A 10 151 5'UTR-5'UTR Inter-chr p22.11 Transcription factor q12.1 Seq+ 25973 ChimerSeq STARFusion TCGA_RNA-Seq CHD7-TOX CHD7 chr8 61655656 + TOX chr8 59872567 - Exonic hg19 COAD TCGA-CM-6172-01A 18 83 In-Frame Intra-chr q12.2 q12.1 Seq+ 25974 ChimerSeq STARFusion TCGA_RNA-Seq SPIDR-ANK1 SPIDR chr8 48614577 + ANK1 chr8 41615655 - Exonic hg19 COAD TCGA-CM-6172-01A 6 48 Out-of-frame Intra-chr q11.21 p11.21 25975 ChimerSeq STARFusion TCGA_RNA-Seq SAE1-FGF9 SAE1 chr19 47646862 + FGF9 chr13 22275329 + Exonic hg19 COAD TCGA-D5-6533-01A 2 4 In-Frame Inter-chr q13.32 q12.11 Seq+ 25976 ChimerSeq STARFusion TCGA_RNA-Seq IPO8-TMTC1 IPO8 chr12 30848498 - TMTC1 chr12 29689250 - Exonic hg19 COAD TCGA-D5-6533-01A 2 3 Out-of-frame Intra-chr p11.21 p11.22 Seq+ 25977 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF18-MAPKAP1 ARHGEF18 chr19 7506938 + MAPKAP1 chr9 128230388 - Exonic hg19 COAD TCGA-AD-6901-01A 2 15 In-Frame Inter-chr p13.2 q33.3 Seq+ 25978 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF7-ING1 ARHGEF7 chr13 111806338 + ING1 chr13 111371576 + Exonic hg19 COAD TCGA-AA-A01K-01A 2 0 Out-of-frame Intra-chr q34 q34 Tumor suppressor gene 25979 ChimerSeq STARFusion TCGA_RNA-Seq GALNT7-SNX25 GALNT7 chr4 174090112 + SNX25 chr4 186241887 + Exonic hg19 COAD TCGA-AA-3544-01A 7 0 In-Frame Intra-chr q34.1 q35.1 Seq+ 25980 ChimerSeq STARFusion TCGA_RNA-Seq ACTBP12-POLDIP3 ACTBP12 chr1 92694646 - POLDIP3 chr22 42999079 - Exonic hg19 COAD TCGA-AA-A01G-01A 3 0 Out-of-frame Inter-chr p22.1 q13.2 25981 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31833504 - Exonic hg19 COAD TCGA-AA-A01G-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 25982 ChimerSeq STARFusion TCGA_RNA-Seq RPS27-FAM159B RPS27 chr1 153963699 + FAM159B chr5 63986324 + Exonic hg19 COAD TCGA-AA-3862-01A 3 0 3'UTR-5'UTR Inter-chr q21.3 q12.3 25983 ChimerSeq STARFusion TCGA_RNA-Seq CD2AP-MDFI CD2AP chr6 47445984 + MDFI chr6 41621057 + Exonic hg19 COAD TCGA-AA-A00O-01A 30 0 In-Frame Intra-chr p12.3 p21.1 Seq+ 25984 ChimerSeq STARFusion TCGA_RNA-Seq ACTBP12-POLDIP3 ACTBP12 chr1 92694646 - POLDIP3 chr22 42999079 - Exonic hg19 COAD TCGA-AA-A00Z-01A 4 0 Out-of-frame Inter-chr p22.1 q13.2 25985 ChimerSeq STARFusion TCGA_RNA-Seq DNMT1-ELAVL3 DNMT1 chr19 10264969 - ELAVL3 chr19 11569426 - Exonic hg19 COAD TCGA-AA-A00Z-01A 4 0 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene Transcription factor p13.2 Seq+ 25986 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31831073 - Exonic hg19 COAD TCGA-AA-A00Z-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 25987 ChimerSeq STARFusion TCGA_RNA-Seq EEF1G-SEZ6L EEF1G chr11 62334393 - SEZ6L chr22 26688199 + Exonic hg19 COAD TCGA-AA-A00Z-01A 3 0 Out-of-frame Inter-chr q12.3 q12.1 25988 ChimerSeq STARFusion TCGA_RNA-Seq KRT8-HNRNPUL1 KRT8 chr12 53298684 - HNRNPUL1 chr19 41782089 + Exonic hg19 COAD TCGA-AA-A00Z-01A 3 0 Out-of-frame Inter-chr q13.13 q13.2 25989 ChimerSeq STARFusion TCGA_RNA-Seq RNA5SP92-EEF1A1 RNA5SP92 chr2 33558018 + EEF1A1 chr6 74229184 - Exonic hg19 COAD TCGA-AA-A00Z-01A 3 0 Out-of-frame Inter-chr p22.3 q13 Tumor suppressor gene 25990 ChimerSeq STARFusion TCGA_RNA-Seq RPS8-ETV5 RPS8 chr1 45241743 + ETV5 chr3 185826703 - Exonic hg19 COAD TCGA-AA-A00Z-01A 3 0 Out-of-frame Inter-chr p34.1 q27.2 Oncogene Transcription factor 25991 ChimerSeq STARFusion TCGA_RNA-Seq TDH-COX7B TDH chr8 11219259 + COX7B chrX 77155025 + Exonic hg19 COAD TCGA-AA-A00Z-01A 3 0 Out-of-frame Inter-chr p23.1 q21.1 25992 ChimerSeq STARFusion TCGA_RNA-Seq TDH-HSP90B1 TDH chr8 11219262 + HSP90B1 chr12 104336942 + Exonic hg19 COAD TCGA-AA-A00Z-01A 3 0 Out-of-frame Inter-chr p23.1 q23.3 Tumor suppressor gene 25993 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-NEU1 ZBTB12 chr6 31868874 - NEU1 chr6 31828024 - Exonic hg19 COAD TCGA-AA-A00Z-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 25994 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868870 - SLC44A4 chr6 31833696 - Exonic hg19 COAD TCGA-AA-A00Z-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 25995 ChimerSeq STARFusion TCGA_RNA-Seq DZANK1-DTD1 DZANK1 chr20 18407711 - DTD1 chr20 18724744 + Exonic hg19 COAD TCGA-DM-A0XD-01A 4 24 In-Frame Intra-chr p11.23 p11.23 Seq+ 25996 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-TYRO3 IGKC chr2 89156966 - TYRO3 chr15 41854865 + Exonic hg19 COAD TCGA-AA-A01P-01A 4 0 Out-of-frame Inter-chr p11.2 q15.1 TK:Axl 25997 ChimerSeq STARFusion TCGA_RNA-Seq GPI-GTF3C1 GPI chr19 34868491 + GTF3C1 chr16 27472239 - Exonic hg19 COAD TCGA-AA-3815-01A 3 0 CDS-3'UTR Inter-chr p12.1 25998 ChimerSeq STARFusion TCGA_RNA-Seq KLF11-TMEM247 KLF11 chr2 10186546 + TMEM247 chr2 46711383 + Exonic hg19 COAD TCGA-CM-6167-01A 5 25 Out-of-frame Intra-chr p25.1 Transcription factor p21 Seq+ 25999 ChimerSeq STARFusion TCGA_RNA-Seq C4A-C2 C4A chr6 31970274 + C2 chr6 31868873 + Exonic hg19 COAD TCGA-AA-A01R-01A 7 0 Out-of-frame Intra-chr p21.33 26000 ChimerSeq STARFusion TCGA_RNA-Seq C4A-C2 C4A chr6 31969347 + C2 chr6 31868874 + Exonic hg19 COAD TCGA-AA-A01R-01A 6 0 Out-of-frame Intra-chr p21.33 26001 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-HSPA1B ZBTB12 chr6 31868874 - HSPA1B chr6 31796514 + Exonic hg19 COAD TCGA-AA-A01R-01A 6 0 Out-of-frame Intra-chr p21.33 Transcription factor 26002 ChimerSeq STARFusion TCGA_RNA-Seq ACIN1-RPL28 ACIN1 chr14 23564688 - RPL28 chr19 55899687 + Exonic hg19 COAD TCGA-AA-A01R-01A 5 0 Out-of-frame Inter-chr q11.2 q13.42 26003 ChimerSeq STARFusion TCGA_RNA-Seq C4A-C2 C4A chr6 31965036 + C2 chr6 31868874 + Exonic hg19 COAD TCGA-AA-A01R-01A 5 0 Out-of-frame Intra-chr p21.33 26004 ChimerSeq STARFusion TCGA_RNA-Seq C4A-C2 C4A chr6 31970368 + C2 chr6 31868872 + Exonic hg19 COAD TCGA-AA-A01R-01A 4 0 Out-of-frame Intra-chr p21.33 26005 ChimerSeq STARFusion TCGA_RNA-Seq C4A-C2 C4A chr6 31969629 + C2 chr6 31868874 + Exonic hg19 COAD TCGA-AA-A01R-01A 4 0 Out-of-frame Intra-chr p21.33 26006 ChimerSeq STARFusion TCGA_RNA-Seq C4A-C2 C4A chr6 31964697 + C2 chr6 31868874 + Exonic hg19 COAD TCGA-AA-A01R-01A 4 0 Out-of-frame Intra-chr p21.33 26007 ChimerSeq STARFusion TCGA_RNA-Seq C4A-C2 C4A chr6 31967113 + C2 chr6 31868872 + Exonic hg19 COAD TCGA-AA-A01R-01A 4 0 Out-of-frame Intra-chr p21.33 26008 ChimerSeq STARFusion TCGA_RNA-Seq C4A-C2 C4A chr6 31966850 + C2 chr6 31868873 + Exonic hg19 COAD TCGA-AA-A01R-01A 4 0 Out-of-frame Intra-chr p21.33 26009 ChimerSeq STARFusion TCGA_RNA-Seq C4A-C2 C4A chr6 31970230 + C2 chr6 31868873 + Exonic hg19 COAD TCGA-AA-A01R-01A 4 0 Out-of-frame Intra-chr p21.33 26010 ChimerSeq STARFusion TCGA_RNA-Seq RPL37A-NRXN2 RPL37A chr2 217366091 + NRXN2 chr11 64390518 - Exonic hg19 COAD TCGA-AA-A01R-01A 4 0 Out-of-frame Inter-chr q35 q13.1 26011 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-NELFE ZBTB12 chr6 31868872 - NELFE chr6 31922367 - Exonic hg19 COAD TCGA-AA-A01R-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 26012 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 COAD TCGA-AA-A01R-01A 4 0 Out-of-frame Inter-chr p13.13 q13.1 26013 ChimerSeq STARFusion TCGA_RNA-Seq HERC2-SLC12A2 HERC2 chr15 28525214 - SLC12A2 chr5 127524635 + Exonic hg19 COAD TCGA-A6-5656-01A 5 27 CDS-5'UTR Inter-chr q23.3 Seq+ 26014 ChimerSeq STARFusion TCGA_RNA-Seq AGSK1-LOC388152 AGSK1 chr15 82764745 - LOC388152 chr15 84868719 - Exonic hg19 COAD TCGA-A6-5656-01A 3 3 Out-of-frame Intra-chr 26015 ChimerSeq STARFusion TCGA_RNA-Seq EDF1-TPRN EDF1 chr9 139757358 - TPRN chr9 140087143 - Exonic hg19 COAD TCGA-A6-5656-01A 2 1 Out-of-frame Intra-chr q34.3 q34.3 26016 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-TYRO3 IGKC chr2 89156966 - TYRO3 chr15 41854865 + Exonic hg19 COAD TCGA-AA-3510-01A 6 0 Out-of-frame Inter-chr p11.2 q15.1 TK:Axl 26017 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-AA-3510-01A 5 0 Out-of-frame Inter-chr p22.1 26018 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC10-RPL31P50 DNAJC10 chr2 183653145 + RPL31P50 chr12 31750085 - Exonic hg19 COAD TCGA-AA-3510-01A 5 0 Out-of-frame Inter-chr q32.1 p11.21 26019 ChimerSeq STARFusion TCGA_RNA-Seq RPS9-HNRNPUL1 RPS9 chr19 54705058 + HNRNPUL1 chr19 41782087 + Exonic hg19 COAD TCGA-AA-3510-01A 5 0 Out-of-frame Intra-chr q13.2 26020 ChimerSeq STARFusion TCGA_RNA-Seq ZNF44-UQCRC1 ZNF44 chr19 12337187 - UQCRC1 chr3 48637118 - Exonic hg19 COAD TCGA-AA-3510-01A 5 0 Out-of-frame Inter-chr p13.2 Transcription factor p21.31 26021 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 COAD TCGA-AA-3510-01A 5 0 Out-of-frame Inter-chr p13.13 q13.1 26022 ChimerSeq STARFusion TCGA_RNA-Seq AIF1L-RPL13AP7 AIF1L chr9 133995770 + RPL13AP7 chr21 26734505 + Exonic hg19 COAD TCGA-AA-3510-01A 4 0 Out-of-frame Inter-chr q34.12 q21.2 26023 ChimerSeq STARFusion TCGA_RNA-Seq ALDH2-HSPA1A ALDH2 chr12 112221083 + HSPA1A chr6 31785084 + Exonic hg19 COAD TCGA-AA-3510-01A 4 0 Out-of-frame Inter-chr q24.12 26024 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-HSPA1A ZBTB12 chr6 31868873 - HSPA1A chr6 31783592 + Exonic hg19 COAD TCGA-AA-3510-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 26025 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA5-FGF6 PLEKHA5 chr12 19283064 + FGF6 chr12 4554439 - Exonic hg19 COAD TCGA-NH-A50U-01A 14 74 In-Frame Intra-chr p12.3 p13.32 Seq+ 26026 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA5-FGF6 PLEKHA5 chr12 19283064 + FGF6 chr12 4553402 - Exonic hg19 COAD TCGA-NH-A50U-01A 10 74 In-Frame Intra-chr p12.3 p13.32 Seq+ 26027 ChimerSeq STARFusion TCGA_RNA-Seq RBCK1-CLCN7 RBCK1 chr20 400375 + CLCN7 chr16 1509188 - Exonic hg19 COAD TCGA-5M-AAT4-01A 2 3 In-Frame Inter-chr p13 Transcription factor p13.3 Seq+ 26028 ChimerSeq STARFusion TCGA_RNA-Seq RIPK1-SERPINB9 RIPK1 chr6 3064293 + SERPINB9 chr6 2900855 - Exonic hg19 COAD TCGA-AA-3845-01A 3 0 5'UTR-5'UTR Intra-chr p25.2 TKL:RIPK p25.2 26029 ChimerSeq STARFusion TCGA_RNA-Seq MICU1-C10orf105 MICU1 chr10 74234858 - C10orf105 chr10 73476099 - Exonic hg19 COAD TCGA-QG-A5Z1-01A 2 2 CDS-5'UTR Intra-chr q22.1 q22.1 Seq+ 26030 ChimerSeq STARFusion TCGA_RNA-Seq SUCLG2-MAGI1 SUCLG2 chr3 67546222 - MAGI1 chr3 65607763 - Exonic hg19 COAD TCGA-QG-A5Z1-01A 2 2 Out-of-frame Intra-chr p14.1 Oncogene 26031 ChimerSeq STARFusion TCGA_RNA-Seq STK4-PI3 STK4 chr20 43653771 + PI3 chr20 43804502 + Exonic hg19 COAD TCGA-QG-A5Z1-01A 2 0 Out-of-frame Intra-chr q13.12 q13.12 26032 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G1-NCOR2 EIF4G1 chr3 184052769 + NCOR2 chr12 124824735 - Exonic hg19 COAD TCGA-AA-3516-01A 7 0 Out-of-frame Inter-chr q27.1 q24.31 26033 ChimerSeq STARFusion TCGA_RNA-Seq ACTG1-HCG18 ACTG1 chr17 79478380 - HCG18 chr6 30256988 - Exonic hg19 COAD TCGA-AA-3516-01A 5 0 Out-of-frame Inter-chr q25.3 26034 ChimerSeq STARFusion TCGA_RNA-Seq RNA5SP92-EEF1A1 RNA5SP92 chr2 33558018 + EEF1A1 chr6 74229184 - Exonic hg19 COAD TCGA-AA-3516-01A 4 0 Out-of-frame Inter-chr p22.3 q13 Tumor suppressor gene 26035 ChimerSeq STARFusion TCGA_RNA-Seq ACTBP12-POLDIP3 ACTBP12 chr1 92694646 - POLDIP3 chr22 42999079 - Exonic hg19 COAD TCGA-AA-3516-01A 3 0 Out-of-frame Inter-chr p22.1 q13.2 26036 ChimerSeq STARFusion TCGA_RNA-Seq AIF1L-RPL13AP7 AIF1L chr9 133995770 + RPL13AP7 chr21 26734505 + Exonic hg19 COAD TCGA-AA-3516-01A 3 0 Out-of-frame Inter-chr q34.12 q21.2 26037 ChimerSeq STARFusion TCGA_RNA-Seq HCG4P3-ZNF536 HCG4P3 chr6 29974382 - ZNF536 chr19 31039209 + Exonic hg19 COAD TCGA-AA-3516-01A 3 0 Out-of-frame Inter-chr q12 Transcription factor 26038 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868872 - SLC44A4 chr6 31831072 - Exonic hg19 COAD TCGA-AA-3516-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 26039 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 COAD TCGA-AA-3516-01A 3 0 Out-of-frame Inter-chr p13.13 q13.1 26040 ChimerSeq STARFusion TCGA_RNA-Seq ALDH2-TFF3 ALDH2 chr12 112221074 + TFF3 chr21 43735501 - Exonic hg19 COAD TCGA-AA-A01T-01A 4 0 Out-of-frame Inter-chr q24.12 q22.3 26041 ChimerSeq STARFusion TCGA_RNA-Seq ACIN1-RPL28 ACIN1 chr14 23564688 - RPL28 chr19 55899687 + Exonic hg19 COAD TCGA-AA-A01T-01A 3 0 Out-of-frame Inter-chr q11.2 q13.42 26042 ChimerSeq STARFusion TCGA_RNA-Seq ALDH2-MTND2P28 ALDH2 chr12 112221074 + MTND2P28 chr1 565739 + Exonic hg19 COAD TCGA-AA-A01T-01A 3 0 Out-of-frame Inter-chr q24.12 p36.33 26043 ChimerSeq STARFusion TCGA_RNA-Seq ALDH2-RPS23P8 ALDH2 chr12 112221075 + RPS23P8 chrX 70182868 + Exonic hg19 COAD TCGA-AA-A01T-01A 3 0 Out-of-frame Inter-chr q24.12 q13.1 26044 ChimerSeq STARFusion TCGA_RNA-Seq ALDH2-RPS24 ALDH2 chr12 112221075 + RPS24 chr10 79796997 + Exonic hg19 COAD TCGA-AA-A01T-01A 3 0 Out-of-frame Inter-chr q24.12 q22.3 26045 ChimerSeq STARFusion TCGA_RNA-Seq ALDH2-RSBN1L ALDH2 chr12 112221077 + RSBN1L chr7 77407865 + Exonic hg19 COAD TCGA-AA-A01T-01A 3 0 Out-of-frame Inter-chr q24.12 q11.23 26046 ChimerSeq STARFusion TCGA_RNA-Seq ACTG1-HCG18 ACTG1 chr17 79478380 - HCG18 chr6 30256988 - Exonic hg19 COAD TCGA-AA-A004-01A 6 0 Out-of-frame Inter-chr q25.3 26047 ChimerSeq STARFusion TCGA_RNA-Seq KNDC1-CRIP1 KNDC1 chr10 134996878 + CRIP1 chr14 105954667 + Exonic hg19 COAD TCGA-AA-A004-01A 4 0 Out-of-frame Inter-chr q26.3 q32.33 26048 ChimerSeq STARFusion TCGA_RNA-Seq RNA5SP92-EEF1A1 RNA5SP92 chr2 33558018 + EEF1A1 chr6 74229184 - Exonic hg19 COAD TCGA-AA-A004-01A 4 0 Out-of-frame Inter-chr p22.3 q13 Tumor suppressor gene 26049 ChimerSeq STARFusion TCGA_RNA-Seq ALDH2-KRT8 ALDH2 chr12 112221081 + KRT8 chr12 53291262 - Exonic hg19 COAD TCGA-AA-A004-01A 3 0 Out-of-frame Intra-chr q24.12 q13.13 26050 ChimerSeq STARFusion TCGA_RNA-Seq BCL7A-USP5 BCL7A chr12 122492862 + USP5 chr12 6975416 + Exonic hg19 COAD TCGA-AA-A004-01A 3 0 Out-of-frame Intra-chr p13.31 26051 ChimerSeq STARFusion TCGA_RNA-Seq C4A-C2 C4A chr6 31999854 + C2 chr6 31868874 + Exonic hg19 COAD TCGA-AA-A004-01A 3 0 Out-of-frame Intra-chr p21.33 26052 ChimerSeq STARFusion TCGA_RNA-Seq GAPDHP44-ETV5 GAPDHP44 chr12 63149582 + ETV5 chr3 185826704 - Exonic hg19 COAD TCGA-AA-A004-01A 3 0 Out-of-frame Inter-chr q14.2 q27.2 Oncogene Transcription factor 26053 ChimerSeq STARFusion TCGA_RNA-Seq HSPA1B-C2 HSPA1B chr6 31797004 + C2 chr6 31868874 + Exonic hg19 COAD TCGA-AA-A004-01A 3 0 Out-of-frame Intra-chr p21.33 26054 ChimerSeq STARFusion TCGA_RNA-Seq MYO1C-PPP1R18 MYO1C chr17 1367647 - PPP1R18 chr6 30655397 - Exonic hg19 COAD TCGA-AA-A004-01A 3 0 Out-of-frame Inter-chr p13.3 p21.33 26055 ChimerSeq STARFusion TCGA_RNA-Seq SGPL1-CAPNS1 SGPL1 chr10 72575763 + CAPNS1 chr19 36632049 + Exonic hg19 COAD TCGA-AA-A004-01A 3 0 Out-of-frame Inter-chr q22.1 q13.12 26056 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-ETV5 TPT1 chr13 45914888 - ETV5 chr3 185826703 - Exonic hg19 COAD TCGA-AA-A004-01A 3 0 Out-of-frame Inter-chr q14.13 q27.2 Oncogene Transcription factor 26057 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31831073 - Exonic hg19 COAD TCGA-AA-A004-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 26058 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-GLO1 ZSWIM4 chr19 13942623 + GLO1 chr6 38644482 - Exonic hg19 COAD TCGA-AA-A004-01A 3 0 Out-of-frame Inter-chr p13.13 p21.2 26059 ChimerSeq STARFusion TCGA_RNA-Seq DSTN-PRORSD1P DSTN chr20 17550835 + PRORSD1P chr2 55509586 + Exonic hg19 COAD TCGA-A6-2679-01A 4 0 Out-of-frame Inter-chr p12.1 p16.1 26060 ChimerSeq STARFusion TCGA_RNA-Seq RPL22-PDE6A RPL22 chr1 6257713 - PDE6A chr5 149246804 - Exonic hg19 COAD TCGA-A6-2679-01A 4 0 Out-of-frame Inter-chr p36.31 q32 26061 ChimerSeq STARFusion TCGA_RNA-Seq RPS21-ZNF536 RPS21 chr20 60962419 + ZNF536 chr19 31039220 + Exonic hg19 COAD TCGA-A6-2679-01A 4 0 Out-of-frame Inter-chr q13.33 q12 Transcription factor 26062 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-A6-2679-01A 3 0 Out-of-frame Inter-chr p22.1 26063 ChimerSeq STARFusion TCGA_RNA-Seq CYSTM1-CD9 CYSTM1 chr5 139623032 + CD9 chr12 6334591 + Exonic hg19 COAD TCGA-A6-2679-01A 3 0 Out-of-frame Inter-chr q31.3 p13.31 26064 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ATP2B2 IGH@ chr14 106174219 - ATP2B2 chr3 10419958 - Exonic hg19 COAD TCGA-A6-2679-01A 3 0 Out-of-frame Inter-chr 32.33 p25.3 26065 ChimerSeq STARFusion TCGA_RNA-Seq IGHA1-ATP2B2 IGHA1 chr14 106174219 - ATP2B2 chr3 10419958 - Exonic hg19 COAD TCGA-A6-2679-01A 3 0 Out-of-frame Inter-chr p25.3 26066 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-TYRO3 IGKC chr2 89156966 - TYRO3 chr15 41854865 + Exonic hg19 COAD TCGA-A6-2679-01A 3 0 Out-of-frame Inter-chr p11.2 q15.1 TK:Axl 26067 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-ZNF536 IGKC chr2 89156826 - ZNF536 chr19 31039222 + Exonic hg19 COAD TCGA-A6-2679-01A 3 0 Out-of-frame Inter-chr p11.2 q12 Transcription factor 26068 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L1-MEA1 NFE2L1 chr17 46137805 + MEA1 chr6 42980113 - Exonic hg19 COAD TCGA-A6-2679-01A 3 0 Out-of-frame Inter-chr q21.32 Transcription factor p21.1 26069 ChimerSeq STARFusion TCGA_RNA-Seq PYROXD1-RPS9 PYROXD1 chr12 21590946 + RPS9 chr19 54705034 + Exonic hg19 COAD TCGA-A6-2679-01A 3 0 Out-of-frame Inter-chr p12.1 26070 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L-C2 SKIV2L chr6 31936300 + C2 chr6 31868873 + Exonic hg19 COAD TCGA-A6-2679-01A 3 0 Out-of-frame Intra-chr p21.33 26071 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-NELFE ZBTB12 chr6 31868874 - NELFE chr6 31922357 - Exonic hg19 COAD TCGA-A6-2679-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 26072 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-NEU1 ZBTB12 chr6 31868873 - NEU1 chr6 31827100 - Exonic hg19 COAD TCGA-A6-2679-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 26073 ChimerSeq STARFusion TCGA_RNA-Seq FOXA2-LINC00261 FOXA2 chr20 22565913 - LINC00261 chr20 22548523 - Exonic hg19 COAD TCGA-A6-2679-01A 2 0 5'UTR-3'UTR Intra-chr p11.21 Tumor suppressor gene Transcription factor p11.21 26074 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128841404 - RSPO3 chr6 127469793 + Exonic hg19 COAD TCGA-AA-3518-01A 5 0 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 26075 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-TYRO3 IGKC chr2 89156966 - TYRO3 chr15 41854865 + Exonic hg19 COAD TCGA-AA-3518-01A 4 0 Out-of-frame Inter-chr p11.2 q15.1 TK:Axl 26076 ChimerSeq STARFusion TCGA_RNA-Seq MUC5B-RN7SL359P MUC5B chr11 1268574 + RN7SL359P chr2 233514679 + Exonic hg19 COAD TCGA-AA-3518-01A 4 0 Out-of-frame Inter-chr p15.5 q37.1 26077 ChimerSeq STARFusion TCGA_RNA-Seq RNA5SP92-EEF1A1 RNA5SP92 chr2 33558018 + EEF1A1 chr6 74229184 - Exonic hg19 COAD TCGA-AA-3518-01A 4 0 Out-of-frame Inter-chr p22.3 q13 Tumor suppressor gene 26078 ChimerSeq STARFusion TCGA_RNA-Seq AIF1L-RPL13AP7 AIF1L chr9 133995770 + RPL13AP7 chr21 26734505 + Exonic hg19 COAD TCGA-AA-3518-01A 3 0 Out-of-frame Inter-chr q34.12 q21.2 26079 ChimerSeq STARFusion TCGA_RNA-Seq C20orf96-RPL3 C20orf96 chr20 258010 - RPL3 chr22 39711448 - Exonic hg19 COAD TCGA-AA-3518-01A 3 0 Out-of-frame Inter-chr p13 q13.1 26080 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31802768 + C2 chr6 31868874 + Exonic hg19 COAD TCGA-AA-3518-01A 3 0 Out-of-frame Intra-chr p21.33 26081 ChimerSeq STARFusion TCGA_RNA-Seq CLK3-MUC2 CLK3 chr15 74907758 + MUC2 chr11 1092784 + Exonic hg19 COAD TCGA-AA-3518-01A 3 0 Out-of-frame Inter-chr q24.1 CMGC:CLK 26082 ChimerSeq STARFusion TCGA_RNA-Seq EEF1G-SEZ6L EEF1G chr11 62334393 - SEZ6L chr22 26688199 + Exonic hg19 COAD TCGA-AA-3518-01A 3 0 Out-of-frame Inter-chr q12.3 q12.1 26083 ChimerSeq STARFusion TCGA_RNA-Seq HSPA1B-C2 HSPA1B chr6 31797796 + C2 chr6 31868874 + Exonic hg19 COAD TCGA-AA-3518-01A 3 0 Out-of-frame Intra-chr p21.33 26084 ChimerSeq STARFusion TCGA_RNA-Seq MUC2-KIRREL3 MUC2 chr11 1092801 + KIRREL3 chr11 126294560 - Exonic hg19 COAD TCGA-AA-3518-01A 3 0 Out-of-frame Intra-chr q24.2 26085 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31839274 - Exonic hg19 COAD TCGA-AA-3518-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 26086 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 COAD TCGA-AA-3518-01A 3 0 Out-of-frame Inter-chr p13.13 q13.1 26087 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-PIGR CEACAM5 chr19 42234052 + PIGR chr1 207102615 - Exonic hg19 COAD TCGA-CA-5796-01A 3 37 Out-of-frame Inter-chr q13.2 q32.1 26088 ChimerSeq STARFusion TCGA_RNA-Seq ACYP2-EML6 ACYP2 chr2 54200947 + EML6 chr2 55126778 + Exonic hg19 COAD TCGA-AZ-6599-01A 2 9 5'UTR-CDS Intra-chr p16.2 p16.1 Seq+ 26089 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB12-IGL@ DNAJB12 chr10 74094040 - IGL@ chr22 23264765 + Exonic hg19 COAD TCGA-AY-6196-01A 14 1 Out-of-frame Inter-chr q22.1 q11.22 26090 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB12-IGL@ DNAJB12 chr10 74094040 - IGL@ chr22 23261706 + Exonic hg19 COAD TCGA-AY-6196-01A 7 1 Out-of-frame Inter-chr q22.1 q11.22 26091 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB2-IGKC DNAJB2 chr2 220151425 + IGKC chr2 89156807 - Exonic hg19 COAD TCGA-AY-6196-01A 7 1 Out-of-frame Intra-chr q35 p11.2 26092 ChimerSeq STARFusion TCGA_RNA-Seq ABCG1-IGH@ ABCG1 chr21 43706005 + IGH@ chr14 106330465 - Exonic hg19 COAD TCGA-AY-6196-01A 5 2 Out-of-frame Inter-chr q22.3 32.33 26093 ChimerSeq STARFusion TCGA_RNA-Seq ATG5-GPR126 ATG5 chr6 106756239 - GPR126 chr6 142736106 + Exonic hg19 COAD TCGA-AY-6196-01A 2 6 Out-of-frame Intra-chr q21 Seq+ 26094 ChimerSeq STARFusion TCGA_RNA-Seq GNA14-TNFSF8 GNA14 chr9 80262586 - TNFSF8 chr9 117680418 - Exonic hg19 COAD TCGA-AY-6196-01A 2 3 Out-of-frame Intra-chr q21.2 q33.1 Seq+ 26095 ChimerSeq STARFusion TCGA_RNA-Seq PSPC1-PARP4P2 PSPC1 chr13 20346382 - PARP4P2 chr13 19981910 + Exonic hg19 COAD TCGA-AY-A8YK-01A 63 123 Out-of-frame Intra-chr q12.11 q12.11 26096 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-RPTOR SLC39A11 chr17 71027695 - RPTOR chr17 78681641 + Exonic hg19 COAD TCGA-AY-A8YK-01A 4 22 In-Frame Intra-chr q25.1 q25.3 Seq+ 26097 ChimerSeq STARFusion TCGA_RNA-Seq ZMPSTE24-TMCO2 ZMPSTE24 chr1 40734207 + TMCO2 chr1 40716955 + Exonic hg19 COAD TCGA-A6-5660-01A 48 242 In-Frame Intra-chr p34.2 p34.2 Seq+ 26098 ChimerSeq STARFusion TCGA_RNA-Seq LAMA5-RNF114 LAMA5 chr20 60937456 - RNF114 chr20 48558098 + Exonic hg19 COAD TCGA-A6-5660-01A 9 54 Out-of-frame Intra-chr q13.33 q13.13 Seq+ 26099 ChimerSeq STARFusion TCGA_RNA-Seq LAMA5-RNF114 LAMA5 chr20 60937456 - RNF114 chr20 48561919 + Exonic hg19 COAD TCGA-A6-5660-01A 5 54 In-Frame Intra-chr q13.33 q13.13 Seq+ 26100 ChimerSeq STARFusion TCGA_RNA-Seq MLL5-TUFT1 MLL5 chr7 104748372 + TUFT1 chr1 151542133 + Exonic hg19 COAD TCGA-A6-5660-01A 5 17 In-Frame Inter-chr q21.3 Seq+ 26101 ChimerSeq STARFusion TCGA_RNA-Seq TUFT1-MLL5 TUFT1 chr1 151538704 + MLL5 chr7 104749389 + Exonic hg19 COAD TCGA-A6-5660-01A 3 3 In-Frame Inter-chr q21.3 Seq+ 26102 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-AA-3488-01A 6 0 Out-of-frame Inter-chr p22.1 26103 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31802768 + C2 chr6 31868874 + Exonic hg19 COAD TCGA-AA-3488-01A 6 0 Out-of-frame Intra-chr p21.33 26104 ChimerSeq STARFusion TCGA_RNA-Seq RLBP1-IFITM1 RLBP1 chr15 89754987 - IFITM1 chr11 314942 + Exonic hg19 COAD TCGA-AA-3488-01A 5 0 Out-of-frame Inter-chr q26.1 p15.5 Oncogene 26105 ChimerSeq STARFusion TCGA_RNA-Seq RLBP1-IFITM2 RLBP1 chr15 89754987 - IFITM2 chr11 309033 + Exonic hg19 COAD TCGA-AA-3488-01A 5 0 Out-of-frame Inter-chr q26.1 p15.5 26106 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-NEU1 ZBTB12 chr6 31868874 - NEU1 chr6 31828276 - Exonic hg19 COAD TCGA-AA-3488-01A 5 0 Out-of-frame Intra-chr p21.33 Transcription factor 26107 ChimerSeq STARFusion TCGA_RNA-Seq CLTA-HNRNPUL1 CLTA chr9 36211663 + HNRNPUL1 chr19 41782087 + Exonic hg19 COAD TCGA-AA-3488-01A 4 0 Out-of-frame Inter-chr p13.3 q13.2 26108 ChimerSeq STARFusion TCGA_RNA-Seq DMWD-DYNLRB1 DMWD chr19 46289254 - DYNLRB1 chr20 33128686 + Exonic hg19 COAD TCGA-AA-3488-01A 4 0 Out-of-frame Inter-chr q13.32 q11.22 26109 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-HSPA1A ZBTB12 chr6 31868874 - HSPA1A chr6 31784305 + Exonic hg19 COAD TCGA-AA-3488-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 26110 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-HSPA1A ZBTB12 chr6 31868874 - HSPA1A chr6 31785051 + Exonic hg19 COAD TCGA-AA-3488-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 26111 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-NEU1 ZBTB12 chr6 31868874 - NEU1 chr6 31827303 - Exonic hg19 COAD TCGA-AA-3488-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 26112 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31831072 - Exonic hg19 COAD TCGA-AA-3488-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 26113 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 COAD TCGA-AA-3488-01A 4 0 Out-of-frame Inter-chr p13.13 q13.1 26114 ChimerSeq STARFusion TCGA_RNA-Seq ALDH2-IGFBP4 ALDH2 chr12 112221080 + IGFBP4 chr17 38613134 + Exonic hg19 COAD TCGA-AA-3488-01A 3 0 Out-of-frame Inter-chr q24.12 q21.2 Tumor suppressor gene 26115 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD6-PSAP ANKRD6 chr6 90272273 + PSAP chr10 73580042 - Exonic hg19 COAD TCGA-AA-3488-01A 3 0 Out-of-frame Inter-chr q15 q22.1 26116 ChimerSeq STARFusion TCGA_RNA-Seq C20orf96-RPL3 C20orf96 chr20 258010 - RPL3 chr22 39711448 - Exonic hg19 COAD TCGA-AA-3488-01A 3 0 Out-of-frame Inter-chr p13 q13.1 26117 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-TYRO3 IGKC chr2 89156966 - TYRO3 chr15 41854865 + Exonic hg19 COAD TCGA-AA-3488-01A 3 0 Out-of-frame Inter-chr p11.2 q15.1 TK:Axl 26118 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1107-CASP6 KIAA1107 chr1 92633442 + CASP6 chr4 110612088 - Exonic hg19 COAD TCGA-AA-3488-01A 3 0 Out-of-frame Inter-chr p22.1 q25 26119 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1107-CTSD KIAA1107 chr1 92633439 + CTSD chr11 1774164 - Exonic hg19 COAD TCGA-AA-3488-01A 3 0 Out-of-frame Inter-chr p22.1 p15.5 26120 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1107-PPDPF KIAA1107 chr1 92633439 + PPDPF chr20 62153106 + Exonic hg19 COAD TCGA-AA-3488-01A 3 0 Out-of-frame Inter-chr p22.1 q13.33 26121 ChimerSeq STARFusion TCGA_RNA-Seq PCBP2-EXOC7 PCBP2 chr12 53853093 + EXOC7 chr17 74082946 - Exonic hg19 COAD TCGA-AA-3488-01A 3 0 Out-of-frame Inter-chr q13.13 q25.1 26122 ChimerSeq STARFusion TCGA_RNA-Seq PSAP-BIRC5 PSAP chr10 73590920 - BIRC5 chr17 76220678 + Exonic hg19 COAD TCGA-AA-3488-01A 3 0 Out-of-frame Inter-chr q22.1 q25.3 Oncogene 26123 ChimerSeq STARFusion TCGA_RNA-Seq RNA5SP92-EEF1A1 RNA5SP92 chr2 33558018 + EEF1A1 chr6 74229184 - Exonic hg19 COAD TCGA-AA-3488-01A 3 0 Out-of-frame Inter-chr p22.3 q13 Tumor suppressor gene 26124 ChimerSeq STARFusion TCGA_RNA-Seq RPL35-PDF RPL35 chr9 127623729 - PDF chr16 69363918 - Exonic hg19 COAD TCGA-AA-3488-01A 3 0 Out-of-frame Inter-chr q33.3 q22.1 26125 ChimerSeq STARFusion TCGA_RNA-Seq RPL37A-NRXN2 RPL37A chr2 217366091 + NRXN2 chr11 64390518 - Exonic hg19 COAD TCGA-AA-3488-01A 3 0 Out-of-frame Inter-chr q35 q13.1 26126 ChimerSeq STARFusion TCGA_RNA-Seq RPL8-EFS RPL8 chr8 146015780 - EFS chr14 23828978 - Exonic hg19 COAD TCGA-AA-3488-01A 3 0 Out-of-frame Inter-chr q24.3 q11.2 26127 ChimerSeq STARFusion TCGA_RNA-Seq UQCRC1-HNRNPUL1 UQCRC1 chr3 48637967 - HNRNPUL1 chr19 41782087 + Exonic hg19 COAD TCGA-AA-3488-01A 3 0 Out-of-frame Inter-chr p21.31 q13.2 26128 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-HSPA1A ZBTB12 chr6 31868874 - HSPA1A chr6 31783602 + Exonic hg19 COAD TCGA-AA-3488-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 26129 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-HSPA1A ZBTB12 chr6 31868872 - HSPA1A chr6 31784869 + Exonic hg19 COAD TCGA-AA-3488-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 26130 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-HSPA1A ZBTB12 chr6 31868874 - HSPA1A chr6 31784320 + Exonic hg19 COAD TCGA-AA-3488-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 26131 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-NELFE ZBTB12 chr6 31868874 - NELFE chr6 31924742 - Exonic hg19 COAD TCGA-AA-3488-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 26132 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-NELFE ZBTB12 chr6 31868870 - NELFE chr6 31922552 - Exonic hg19 COAD TCGA-AA-3488-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 26133 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-NELFE ZBTB12 chr6 31868872 - NELFE chr6 31922367 - Exonic hg19 COAD TCGA-AA-3488-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 26134 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-NEU1 ZBTB12 chr6 31868874 - NEU1 chr6 31827247 - Exonic hg19 COAD TCGA-AA-3488-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 26135 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868873 - SLC44A4 chr6 31831413 - Exonic hg19 COAD TCGA-AA-3488-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 26136 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868873 - SLC44A4 chr6 31838726 - Exonic hg19 COAD TCGA-AA-3488-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 26137 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31842808 - Exonic hg19 COAD TCGA-AA-3488-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 26138 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-VARS ZBTB12 chr6 31868873 - VARS chr6 31746794 - Exonic hg19 COAD TCGA-AA-3488-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 26139 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPL15 ZSWIM4 chr19 13942623 + RPL15 chr3 23960907 + Exonic hg19 COAD TCGA-AA-3488-01A 3 0 Out-of-frame Inter-chr p13.13 p24.2 26140 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-AA-3673-01A 4 0 Out-of-frame Inter-chr p22.1 26141 ChimerSeq STARFusion TCGA_RNA-Seq CDYL-RNA45S5 CDYL chr6 4776751 + RNA45S5 chrUn_gl000220 113491 + Exonic hg19 COAD TCGA-A6-6650-01A 6 1 Out-of-frame Inter-chr p25.1 26142 ChimerSeq STARFusion TCGA_RNA-Seq APLP2-RNA45S5 APLP2 chr11 130005541 + RNA45S5 chrUn_gl000220 116075 + Exonic hg19 COAD TCGA-A6-6650-01A 3 3 Out-of-frame Inter-chr q24.3 26143 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-SSH1 RNA45S5 chrUn_gl000220 113463 + SSH1 chr12 109181615 - Exonic hg19 COAD TCGA-A6-6650-01A 3 1 Out-of-frame Inter-chr q24.11 26144 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-A6-2672-01A 5 0 Out-of-frame Inter-chr p22.1 26145 ChimerSeq STARFusion TCGA_RNA-Seq HCG4P3-ZNF536 HCG4P3 chr6 29974382 - ZNF536 chr19 31039209 + Exonic hg19 COAD TCGA-A6-2672-01A 5 0 Out-of-frame Inter-chr q12 Transcription factor 26146 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128841404 - RSPO3 chr6 127469793 + Exonic hg19 COAD TCGA-A6-2672-01A 4 0 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 26147 ChimerSeq STARFusion TCGA_RNA-Seq RPL22-PDE6A RPL22 chr1 6257713 - PDE6A chr5 149246804 - Exonic hg19 COAD TCGA-A6-2672-01A 4 0 Out-of-frame Inter-chr p36.31 q32 26148 ChimerSeq STARFusion TCGA_RNA-Seq ACTBP12-POLDIP3 ACTBP12 chr1 92694646 - POLDIP3 chr22 42999079 - Exonic hg19 COAD TCGA-A6-2672-01A 3 0 Out-of-frame Inter-chr p22.1 q13.2 26149 ChimerSeq STARFusion TCGA_RNA-Seq AIF1L-RPL13AP7 AIF1L chr9 133995770 + RPL13AP7 chr21 26734505 + Exonic hg19 COAD TCGA-A6-2672-01A 3 0 Out-of-frame Inter-chr q34.12 q21.2 26150 ChimerSeq STARFusion TCGA_RNA-Seq RPS27-FAM159B RPS27 chr1 153963699 + FAM159B chr5 63986324 + Exonic hg19 COAD TCGA-A6-2672-01A 3 0 3'UTR-5'UTR Inter-chr q21.3 q12.3 26151 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-AA-3560-01A 4 0 Out-of-frame Inter-chr p22.1 26152 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-ETV5 TPT1 chr13 45914888 - ETV5 chr3 185826703 - Exonic hg19 COAD TCGA-AA-3560-01A 4 0 Out-of-frame Inter-chr q14.13 q27.2 Oncogene Transcription factor 26153 ChimerSeq STARFusion TCGA_RNA-Seq POLN-TFF3 POLN chr4 2078366 - TFF3 chr21 43733709 - Exonic hg19 COAD TCGA-AA-3560-01A 3 0 Out-of-frame Inter-chr p16.3 q22.3 26154 ChimerSeq STARFusion TCGA_RNA-Seq RPS19-CYBA RPS19 chr19 42373284 + CYBA chr16 88709928 - Exonic hg19 COAD TCGA-AA-3560-01A 3 0 Out-of-frame Inter-chr q13.2 q24.2 26155 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-ELK2AP GAS6 chr13 114525072 - ELK2AP chr14 106136184 - Exonic hg19 COAD TCGA-A6-6651-01A 15 0 Out-of-frame Inter-chr q34 Oncogene 26156 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0146-LAPTM4B KIAA0146 chr8 48511758 + LAPTM4B chr8 98863625 + Exonic hg19 COAD TCGA-AA-3662-01A 15 40 Out-of-frame Intra-chr q22.1 Seq+ 26157 ChimerSeq STARFusion TCGA_RNA-Seq RPH3AL-ALOX15B RPH3AL chr17 169211 - ALOX15B chr17 7942704 + Exonic hg19 COAD TCGA-AA-3662-01A 6 18 In-Frame Intra-chr p13.1 Tumor suppressor gene Seq+ 26158 ChimerSeq STARFusion TCGA_RNA-Seq ACOT7-LINC00337 ACOT7 chr1 6453317 - LINC00337 chr1 6297305 + Exonic hg19 COAD TCGA-AA-3846-01A 3 0 Out-of-frame Intra-chr p36.31 p36.31 26159 ChimerSeq STARFusion TCGA_RNA-Seq CELF1-MYBPC3 CELF1 chr11 47574544 - MYBPC3 chr11 47369456 - Exonic hg19 COAD TCGA-AA-3846-01A 3 0 5'UTR-CDS Intra-chr p11.2 p11.2 26160 ChimerSeq STARFusion TCGA_RNA-Seq CHD7-TOX CHD7 chr8 61655656 + TOX chr8 59872567 - Exonic hg19 COAD TCGA-4T-AA8H-01A 4 34 In-Frame Intra-chr q12.2 q12.1 Seq+ 26161 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-RPS27A IGH@ chr14 107218674 - RPS27A chr2 55460402 + Exonic hg19 COAD TCGA-A6-6649-01A 10 2 Out-of-frame Inter-chr 32.33 p16.1 26162 ChimerSeq STARFusion TCGA_RNA-Seq CDH17-ERLIN2 CDH17 chr8 95206863 - ERLIN2 chr8 37597883 + Exonic hg19 COAD TCGA-A6-2677-01A 3 37 Out-of-frame Intra-chr q22.1 Tumor suppressor gene p11.23 Seq+ 26163 ChimerSeq STARFusion TCGA_RNA-Seq H2AFX-HIST2H2AA3 H2AFX chr11 118965902 - HIST2H2AA3 chr1 149814063 - Exonic hg19 COAD TCGA-A6-2677-01A 3 3 Out-of-frame Inter-chr q23.3 Tumor suppressor gene q21.2 26164 ChimerSeq STARFusion TCGA_RNA-Seq H2AFX-HIST2H2AA4 H2AFX chr11 118965902 - HIST2H2AA4 chr1 149814063 - Exonic hg19 COAD TCGA-A6-2677-01A 3 3 Out-of-frame Inter-chr q23.3 Tumor suppressor gene q21.2 26165 ChimerSeq STARFusion TCGA_RNA-Seq C20orf194-ASPH C20orf194 chr20 3285087 - ASPH chr8 62559437 - Exonic hg19 COAD TCGA-A6-2677-01A 3 2 Out-of-frame Inter-chr p13 q12.3 Seq+ 26166 ChimerSeq STARFusion TCGA_RNA-Seq HES6-RNA45S5 HES6 chr2 239147455 - RNA45S5 chrUn_gl000220 114426 + Exonic hg19 COAD TCGA-A6-2677-01A 3 1 Out-of-frame Inter-chr q37.3 Transcription factor 26167 ChimerSeq STARFusion TCGA_RNA-Seq ESCO2-PTK2B ESCO2 chr8 27641574 + PTK2B chr8 27255065 + Exonic hg19 COAD TCGA-A6-2677-01A 2 1 CDS-5'UTR Intra-chr p21.1 p21.2 Seq+ 26168 ChimerSeq STARFusion TCGA_RNA-Seq PTPRA-CDK5RAP1 PTPRA chr20 2854406 + CDK5RAP1 chr20 31975339 - Exonic hg19 COAD TCGA-A6-2677-01A 2 0 5'UTR-CDS Intra-chr p13 q11.21 Seq+ 26169 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31807343 + C2 chr6 31868872 + Exonic hg19 COAD TCGA-AA-3693-01A 4 0 Out-of-frame Intra-chr p21.33 26170 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12022903 + NTRK3 chr15 88483984 - Exonic hg19 COAD TCGA-CK-5916-01A 5 15 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 26171 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-TYRO3 IGKC chr2 89156966 - TYRO3 chr15 41854865 + Exonic hg19 COAD TCGA-A6-4107-01A 5 0 Out-of-frame Inter-chr p11.2 q15.1 TK:Axl 26172 ChimerSeq STARFusion TCGA_RNA-Seq PYROXD1-RPS9 PYROXD1 chr12 21590946 + RPS9 chr19 54705034 + Exonic hg19 COAD TCGA-A6-4107-01A 5 0 Out-of-frame Inter-chr p12.1 26173 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-A6-4107-01A 4 0 Out-of-frame Inter-chr p22.1 26174 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC10-RPL31P50 DNAJC10 chr2 183653145 + RPL31P50 chr12 31750085 - Exonic hg19 COAD TCGA-A6-4107-01A 4 0 Out-of-frame Inter-chr q32.1 p11.21 26175 ChimerSeq STARFusion TCGA_RNA-Seq POLN-TFF3 POLN chr4 2078366 - TFF3 chr21 43733709 - Exonic hg19 COAD TCGA-A6-4107-01A 4 0 Out-of-frame Inter-chr p16.3 q22.3 26176 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868873 - SLC44A4 chr6 31831427 - Exonic hg19 COAD TCGA-A6-4107-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 26177 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 COAD TCGA-A6-4107-01A 4 0 Out-of-frame Inter-chr p13.13 q13.1 26178 ChimerSeq STARFusion TCGA_RNA-Seq IGHG4-ETV5 IGHG4 chr14 106090824 - ETV5 chr3 185826704 - Exonic hg19 COAD TCGA-AA-A00D-01A 4 0 Out-of-frame Inter-chr q27.2 Oncogene Transcription factor 26179 ChimerSeq STARFusion TCGA_RNA-Seq CTSD-CENPB CTSD chr11 1776150 - CENPB chr20 3767191 - Exonic hg19 COAD TCGA-AA-A00D-01A 3 0 Out-of-frame Inter-chr p15.5 p13 Transcription factor 26180 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-TYRO3 IGKC chr2 89156966 - TYRO3 chr15 41854865 + Exonic hg19 COAD TCGA-AA-A00D-01A 3 0 Out-of-frame Inter-chr p11.2 q15.1 TK:Axl 26181 ChimerSeq STARFusion TCGA_RNA-Seq RPS27A-ETV5 RPS27A chr2 55459986 + ETV5 chr3 185826703 - Exonic hg19 COAD TCGA-AA-A00D-01A 3 0 Out-of-frame Inter-chr p16.1 q27.2 Oncogene Transcription factor 26182 ChimerSeq STARFusion TCGA_RNA-Seq ABR-FAM101B ABR chr17 953290 - FAM101B chr17 295730 - Exonic hg19 COAD TCGA-AY-A71X-01A 3 7 Out-of-frame Intra-chr p13.3 26183 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-AA-3514-01A 4 0 Out-of-frame Inter-chr p22.1 26184 ChimerSeq STARFusion TCGA_RNA-Seq GAPDH-PDE6A GAPDH chr12 6646176 + PDE6A chr5 149246803 - Exonic hg19 COAD TCGA-AA-3514-01A 3 0 Out-of-frame Inter-chr p13.31 q32 26185 ChimerSeq STARFusion TCGA_RNA-Seq NOL12-IGF2 NOL12 chr22 38169925 + IGF2 chr11 2153090 - Exonic hg19 COAD TCGA-AA-3514-01A 3 0 Out-of-frame Inter-chr q13.1 p15.5 Oncogene 26186 ChimerSeq STARFusion TCGA_RNA-Seq POLN-TFF3 POLN chr4 2078366 - TFF3 chr21 43733709 - Exonic hg19 COAD TCGA-AA-3514-01A 3 0 Out-of-frame Inter-chr p16.3 q22.3 26187 ChimerSeq STARFusion TCGA_RNA-Seq RNA5SP92-EEF1A1 RNA5SP92 chr2 33558018 + EEF1A1 chr6 74229184 - Exonic hg19 COAD TCGA-AA-3514-01A 3 0 Out-of-frame Inter-chr p22.3 q13 Tumor suppressor gene 26188 ChimerSeq STARFusion TCGA_RNA-Seq RPL37A-ETV5 RPL37A chr2 217364031 + ETV5 chr3 185826703 - Exonic hg19 COAD TCGA-AA-3514-01A 3 0 Out-of-frame Inter-chr q35 q27.2 Oncogene Transcription factor 26189 ChimerSeq STARFusion TCGA_RNA-Seq SFN-IGF2 SFN chr1 27190346 + IGF2 chr11 2152997 - Exonic hg19 COAD TCGA-AA-3514-01A 3 0 Out-of-frame Inter-chr p36.11 Tumor suppressor gene p15.5 Oncogene 26190 ChimerSeq STARFusion TCGA_RNA-Seq TRIOBP-IGF2 TRIOBP chr22 38169929 + IGF2 chr11 2153090 - Exonic hg19 COAD TCGA-AA-3514-01A 3 0 Out-of-frame Inter-chr q13.1 p15.5 Oncogene 26191 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31802763 + C2 chr6 31868874 + Exonic hg19 COAD TCGA-AA-3527-01A 4 0 Out-of-frame Intra-chr p21.33 26192 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-AA-3527-01A 3 0 Out-of-frame Inter-chr p22.1 26193 ChimerSeq STARFusion TCGA_RNA-Seq NT5C2-ARL3 NT5C2 chr10 104899163 - ARL3 chr10 104449700 - Exonic hg19 COAD TCGA-DM-A28A-01A 7 25 Out-of-frame Intra-chr q24.33 q24.32 Seq+ 26194 ChimerSeq STARFusion TCGA_RNA-Seq NT5C2-ARL3 NT5C2 chr10 104934615 - ARL3 chr10 104449700 - Exonic hg19 COAD TCGA-DM-A28A-01A 6 25 Out-of-frame Intra-chr q24.33 q24.32 Seq+ 26195 ChimerSeq STARFusion TCGA_RNA-Seq ORMDL1-RALGDS ORMDL1 chr2 190648995 - RALGDS chr9 135979718 - Exonic hg19 COAD TCGA-DM-A28A-01A 7 17 5'UTR-CDS Inter-chr q32.2 q34.2 Oncogene Seq+ 26196 ChimerSeq STARFusion TCGA_RNA-Seq RASA3-SCARA3 RASA3 chr13 114765061 - SCARA3 chr8 27528417 + Exonic hg19 COAD TCGA-DM-A28A-01A 4 5 Out-of-frame Inter-chr p21.1 Seq+ 26197 ChimerSeq STARFusion TCGA_RNA-Seq MRRF-TTLL11 MRRF chr9 125054119 + TTLL11 chr9 124633027 - Exonic hg19 COAD TCGA-DM-A28A-01A 3 7 In-Frame Intra-chr q33.2 q33.2 Seq+ 26198 ChimerSeq STARFusion TCGA_RNA-Seq UBE2K-G3BP2 UBE2K chr4 39700010 + G3BP2 chr4 76587233 - Exonic hg19 COAD TCGA-DM-A28A-01A 2 4 CDS-5'UTR Intra-chr p14 q21.1 Seq+ 26199 ChimerSeq STARFusion TCGA_RNA-Seq CCDC171-CNTLN CCDC171 chr9 15784692 + CNTLN chr9 17457522 + Exonic hg19 COAD TCGA-DM-A28A-01A 2 2 In-Frame Intra-chr p22.3 p22.2 Seq+ 26200 ChimerSeq STARFusion TCGA_RNA-Seq HSPA1B-C2 HSPA1B chr6 31796702 + C2 chr6 31868874 + Exonic hg19 COAD TCGA-AA-A00U-01A 3 0 Out-of-frame Intra-chr p21.33 26201 ChimerSeq STARFusion TCGA_RNA-Seq RPS3P6-ETV5 RPS3P6 chr12 62415880 - ETV5 chr3 185826704 - Exonic hg19 COAD TCGA-AA-A00U-01A 3 0 Out-of-frame Inter-chr q14.1 q27.2 Oncogene Transcription factor 26202 ChimerSeq STARFusion TCGA_RNA-Seq CDH17-ERLIN2 CDH17 chr8 95206863 - ERLIN2 chr8 37597883 + Exonic hg19 COAD TCGA-A6-2677-01A 7 0 Out-of-frame Intra-chr q22.1 Tumor suppressor gene p11.23 Seq+ 26203 ChimerSeq STARFusion TCGA_RNA-Seq TTBK2-ZFP106 TTBK2 chr15 43132558 - ZFP106 chr15 42710149 - Exonic hg19 COAD TCGA-AA-3697-01A 2 4 In-Frame Intra-chr q15.2 CK1:TTBK 26204 ChimerSeq STARFusion TCGA_RNA-Seq DGKH-UFM1 DGKH chr13 42623101 + UFM1 chr13 38924136 + Exonic hg19 COAD TCGA-AA-3697-01A 2 2 Out-of-frame Intra-chr q14.11 q13.3 26205 ChimerSeq STARFusion TCGA_RNA-Seq MICALL2-KLK1 MICALL2 chr7 1486349 - KLK1 chr19 51323699 - Exonic hg19 COAD TCGA-CK-6751-01A 2 3 In-Frame Inter-chr p22.3 q13.33 Seq+ 26206 ChimerSeq STARFusion TCGA_RNA-Seq GRM8-UBE2H GRM8 chr7 126882749 - UBE2H chr7 129474901 - Exonic hg19 COAD TCGA-AA-3982-01A 4 0 Out-of-frame Intra-chr q31.33 Oncogene q32.2 26207 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31831073 - Exonic hg19 COAD TCGA-AA-3982-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 26208 ChimerSeq STARFusion TCGA_RNA-Seq SETD2-RSPO1 SETD2 chr3 47165602 - RSPO1 chr1 38077420 - Exonic hg19 COAD TCGA-AA-3848-01A 3 0 CDS-3'UTR Inter-chr p21.31 Oncogene Tumor suppressor gene p34.3 26209 ChimerSeq STARFusion TCGA_RNA-Seq DLGAP4-HCK DLGAP4 chr20 35089913 + HCK chr20 30659465 + Exonic hg19 COAD TCGA-AA-3812-01A 6 0 5'UTR-5'UTR Intra-chr q11.23 q11.21 TK:Src 26210 ChimerSeq STARFusion TCGA_RNA-Seq DLGAP4-HCK DLGAP4 chr20 35093770 + HCK chr20 30659465 + Exonic hg19 COAD TCGA-AA-3812-01A 2 0 5'UTR-5'UTR Intra-chr q11.23 q11.21 TK:Src 26211 ChimerSeq STARFusion TCGA_RNA-Seq GPR56-FAM192A GPR56 chr16 57653793 + FAM192A chr16 57207781 - Exonic hg19 COAD TCGA-AA-3812-01A 2 0 5'UTR-5'UTR Intra-chr q21 q13 26212 ChimerSeq STARFusion TCGA_RNA-Seq SGK196-CHRNA6 SGK196 chr8 42958973 + CHRNA6 chr8 42620347 - Exonic hg19 COAD TCGA-AZ-6606-01A 17 31 Out-of-frame Intra-chr p11.21 26213 ChimerSeq STARFusion TCGA_RNA-Seq GPALPP1-VWA8 GPALPP1 chr13 45583014 + VWA8 chr13 42142441 - Exonic hg19 COAD TCGA-CM-5862-01A 62 230 Out-of-frame Intra-chr q14.12 q14.11 Seq+ 26214 ChimerSeq STARFusion TCGA_RNA-Seq GPALPP1-MIR5006 GPALPP1 chr13 45583014 + MIR5006 chr13 42142441 - Exonic hg19 COAD TCGA-CM-5862-01A 62 55 Out-of-frame Intra-chr q14.12 q14.11 Seq+ 26215 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86351941 + Exonic hg19 COAD TCGA-CM-5862-01A 2 13 Out-of-frame Intra-chr q21.2 q21.2 26216 ChimerSeq STARFusion TCGA_RNA-Seq EYA3-GUCA1C EYA3 chr1 28415035 - GUCA1C chr3 108639432 - Exonic hg19 COAD TCGA-5M-AAT6-01A 4 9 5'UTR-CDS Inter-chr p35.3 q13.13 Seq+ 26217 ChimerSeq STARFusion TCGA_RNA-Seq AGAP1-CIR1 AGAP1 chr2 236715975 + CIR1 chr2 175252507 - Exonic hg19 COAD TCGA-AY-5543-01A 13 119 In-Frame Intra-chr q37.2 q31.1 Seq+ 26218 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A33-APIP SLC25A33 chr1 9613863 + APIP chr11 34905051 - Exonic hg19 COAD TCGA-AY-5543-01A 2 1 In-Frame Inter-chr p36.22 p13 Seq+ 26219 ChimerSeq STARFusion TCGA_RNA-Seq CLCA1-PAQR8 CLCA1 chr1 86959947 + PAQR8 chr6 52226316 + Exonic hg19 COAD TCGA-CM-4746-01A 6 0 Out-of-frame Inter-chr p22.3 p12.2 26220 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-CM-4746-01A 5 0 Out-of-frame Inter-chr p22.1 26221 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC10-RPL31P50 DNAJC10 chr2 183653145 + RPL31P50 chr12 31750085 - Exonic hg19 COAD TCGA-CM-4746-01A 5 0 Out-of-frame Inter-chr q32.1 p11.21 26222 ChimerSeq STARFusion TCGA_RNA-Seq POLN-TFF3 POLN chr4 2078366 - TFF3 chr21 43733709 - Exonic hg19 COAD TCGA-CM-4746-01A 5 0 Out-of-frame Inter-chr p16.3 q22.3 26223 ChimerSeq STARFusion TCGA_RNA-Seq NAIP-RPS4X NAIP chr5 70281588 - RPS4X chrX 71492623 - Exonic hg19 COAD TCGA-CM-4746-01A 4 0 Out-of-frame Inter-chr q13.2 q13.1 26224 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-LSM2 ZBTB12 chr6 31868873 - LSM2 chr6 31765534 - Exonic hg19 COAD TCGA-CM-4746-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 26225 ChimerSeq STARFusion TCGA_RNA-Seq AIF1L-RPL13AP7 AIF1L chr9 133995770 + RPL13AP7 chr21 26734505 + Exonic hg19 COAD TCGA-CM-4746-01A 3 0 Out-of-frame Inter-chr q34.12 q21.2 26226 ChimerSeq STARFusion TCGA_RNA-Seq ARMC10-OLFM4 ARMC10 chr7 102736805 + OLFM4 chr13 53626017 + Exonic hg19 COAD TCGA-CM-4746-01A 3 0 Out-of-frame Inter-chr Tumor suppressor gene q14.3 Tumor suppressor gene 26227 ChimerSeq STARFusion TCGA_RNA-Seq C11orf31-YIPF6 C11orf31 chr11 57509004 + YIPF6 chrX 67718627 + Exonic hg19 COAD TCGA-CM-4746-01A 3 0 Out-of-frame Inter-chr q12 26228 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31802823 + C2 chr6 31868874 + Exonic hg19 COAD TCGA-CM-4746-01A 3 0 Out-of-frame Intra-chr p21.33 26229 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31802766 + C2 chr6 31868874 + Exonic hg19 COAD TCGA-CM-4746-01A 3 0 Out-of-frame Intra-chr p21.33 26230 ChimerSeq STARFusion TCGA_RNA-Seq CLCA1-TTC40 CLCA1 chr1 86959172 + TTC40 chr10 134726711 - Exonic hg19 COAD TCGA-CM-4746-01A 3 0 Out-of-frame Inter-chr p22.3 26231 ChimerSeq STARFusion TCGA_RNA-Seq CTAGE14P-TFF3 CTAGE14P chr2 168572527 - TFF3 chr21 43735444 - Exonic hg19 COAD TCGA-CM-4746-01A 3 0 Out-of-frame Inter-chr q24.3 q22.3 26232 ChimerSeq STARFusion TCGA_RNA-Seq EDF1-FAM159B EDF1 chr9 139757358 - FAM159B chr5 63986324 + Exonic hg19 COAD TCGA-CM-4746-01A 3 0 CDS-5'UTR Inter-chr q34.3 q12.3 26233 ChimerSeq STARFusion TCGA_RNA-Seq HEPHL1-PANX1 HEPHL1 chr11 93800909 + PANX1 chr11 93862494 + Exonic hg19 COAD TCGA-CM-4746-01A 3 0 Out-of-frame Intra-chr q21 q21 26234 ChimerSeq STARFusion TCGA_RNA-Seq NCR3LG1-CLCA1 NCR3LG1 chr11 17395498 + CLCA1 chr1 86939508 + Exonic hg19 COAD TCGA-CM-4746-01A 3 0 Out-of-frame Inter-chr p15.1 p22.3 26235 ChimerSeq STARFusion TCGA_RNA-Seq PYROXD1-RPS9 PYROXD1 chr12 21590946 + RPS9 chr19 54705034 + Exonic hg19 COAD TCGA-CM-4746-01A 3 0 Out-of-frame Inter-chr p12.1 26236 ChimerSeq STARFusion TCGA_RNA-Seq RNA5SP92-EEF1A1 RNA5SP92 chr2 33558018 + EEF1A1 chr6 74229184 - Exonic hg19 COAD TCGA-CM-4746-01A 3 0 Out-of-frame Inter-chr p22.3 q13 Tumor suppressor gene 26237 ChimerSeq STARFusion TCGA_RNA-Seq RPL12-FAM159B RPL12 chr9 130210161 - FAM159B chr5 63986325 + Exonic hg19 COAD TCGA-CM-4746-01A 3 0 Out-of-frame Inter-chr q33.3 q12.3 26238 ChimerSeq STARFusion TCGA_RNA-Seq RPL18-ETV5 RPL18 chr19 49120009 - ETV5 chr3 185826703 - Exonic hg19 COAD TCGA-CM-4746-01A 3 0 Out-of-frame Inter-chr q13.33 q27.2 Oncogene Transcription factor 26239 ChimerSeq STARFusion TCGA_RNA-Seq RPL22-PDE6A RPL22 chr1 6257713 - PDE6A chr5 149246804 - Exonic hg19 COAD TCGA-CM-4746-01A 3 0 Out-of-frame Inter-chr p36.31 q32 26240 ChimerSeq STARFusion TCGA_RNA-Seq RPL37A-ETV5 RPL37A chr2 217364031 + ETV5 chr3 185826703 - Exonic hg19 COAD TCGA-CM-4746-01A 3 0 Out-of-frame Inter-chr q35 q27.2 Oncogene Transcription factor 26241 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-ETV5 TPT1 chr13 45914888 - ETV5 chr3 185826703 - Exonic hg19 COAD TCGA-CM-4746-01A 3 0 Out-of-frame Inter-chr q14.13 q27.2 Oncogene Transcription factor 26242 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-LSM2 ZBTB12 chr6 31868873 - LSM2 chr6 31765592 - Exonic hg19 COAD TCGA-CM-4746-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 26243 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31831077 - Exonic hg19 COAD TCGA-CM-4746-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 26244 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31833699 - Exonic hg19 COAD TCGA-CM-4746-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 26245 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31832836 - Exonic hg19 COAD TCGA-CM-4746-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 26246 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 COAD TCGA-CM-4746-01A 3 0 Out-of-frame Inter-chr p13.13 q13.1 26247 ChimerSeq STARFusion TCGA_RNA-Seq BPTF-PITPNC1 BPTF chr17 65862803 + PITPNC1 chr17 65665624 + Exonic hg19 COAD TCGA-AA-3517-01A 8 0 Out-of-frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 26248 ChimerSeq STARFusion TCGA_RNA-Seq PGAP3-RNF43 PGAP3 chr17 37842175 - RNF43 chr17 56448394 - Exonic hg19 COAD TCGA-AA-3517-01A 5 0 In-Frame Intra-chr q12 Oncogene q22 Oncogene 26249 ChimerSeq STARFusion TCGA_RNA-Seq RPL37A-ETV5 RPL37A chr2 217364031 + ETV5 chr3 185826703 - Exonic hg19 COAD TCGA-AA-3517-01A 3 0 Out-of-frame Inter-chr q35 q27.2 Oncogene Transcription factor 26250 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 COAD TCGA-AA-3517-01A 3 0 Out-of-frame Inter-chr p13.13 q13.1 26251 ChimerSeq STARFusion TCGA_RNA-Seq EDF1-FAM159B EDF1 chr9 139757358 - FAM159B chr5 63986324 + Exonic hg19 COAD TCGA-AA-3844-01A 4 0 CDS-5'UTR Inter-chr q34.3 q12.3 26252 ChimerSeq STARFusion TCGA_RNA-Seq RPL37-TTC40 RPL37 chr5 40834295 - TTC40 chr10 134726712 - Exonic hg19 COAD TCGA-AA-3844-01A 3 0 Out-of-frame Inter-chr p13.1 26253 ChimerSeq STARFusion TCGA_RNA-Seq DDX42-CCDC47 DDX42 chr17 61894326 + CCDC47 chr17 61833930 - Exonic hg19 COAD TCGA-AA-3854-01A 5 0 In-Frame Intra-chr q23.3 q23.3 26254 ChimerSeq STARFusion TCGA_RNA-Seq BZW2-IMMP2L BZW2 chr7 16722470 + IMMP2L chr7 110303777 - Exonic hg19 COAD TCGA-AA-3492-01A 5 57 In-Frame Intra-chr p21.1 q31.1 Seq+ 26255 ChimerSeq STARFusion TCGA_RNA-Seq MPP5-GPHN MPP5 chr14 67708250 + GPHN chr14 67525366 + Exonic hg19 COAD TCGA-AU-6004-01A 20 42 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 26256 ChimerSeq STARFusion TCGA_RNA-Seq DOT1L-BTBD2 DOT1L chr19 2223484 + BTBD2 chr19 1997463 - Exonic hg19 COAD TCGA-AA-3511-01A 9 20 Out-of-frame Intra-chr p13.3 Oncogene Transcription factor p13.3 Seq+ 26257 ChimerSeq STARFusion TCGA_RNA-Seq EIF2A-B2M EIF2A chr3 150301763 + B2M chr15 45007621 + Exonic hg19 COAD TCGA-AA-3529-01A 6 0 3'UTR-CDS Inter-chr q25.1 Oncogene 26258 ChimerSeq STARFusion TCGA_RNA-Seq HEPHL1-PANX1 HEPHL1 chr11 93800909 + PANX1 chr11 93862494 + Exonic hg19 COAD TCGA-AA-3529-01A 4 0 Out-of-frame Intra-chr q21 q21 26259 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 COAD TCGA-AA-3529-01A 3 0 Out-of-frame Inter-chr q13.33 p21.1 26260 ChimerSeq STARFusion TCGA_RNA-Seq RPS9-PDE6A RPS9 chr19 54705152 + PDE6A chr5 149246799 - Exonic hg19 COAD TCGA-AA-3529-01A 3 0 Out-of-frame Inter-chr q32 26261 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-RNF207 PUM1 chr1 31452909 - RNF207 chr1 6266236 + Exonic hg19 COAD TCGA-D5-5537-01A 7 10 CDS-5'UTR Intra-chr p35.2 p36.31 Seq+ 26262 ChimerSeq STARFusion TCGA_RNA-Seq CDH17-ERLIN2 CDH17 chr8 95206863 - ERLIN2 chr8 37597883 + Exonic hg19 COAD TCGA-A6-2677-01B 3 21 Out-of-frame Intra-chr q22.1 Tumor suppressor gene p11.23 Seq+ 26263 ChimerSeq STARFusion TCGA_RNA-Seq CDH17-ERLIN2 CDH17 chr8 95206863 - ERLIN2 chr8 37601873 + Exonic hg19 COAD TCGA-A6-2677-01B 2 20 Out-of-frame Intra-chr q22.1 Tumor suppressor gene p11.23 Seq+ 26264 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-A6-2671-01A 9 0 Out-of-frame Inter-chr p22.1 26265 ChimerSeq STARFusion TCGA_RNA-Seq NAIP-IFI27 NAIP chr5 70281590 - IFI27 chr14 94582131 + Exonic hg19 COAD TCGA-A6-2671-01A 8 0 Out-of-frame Inter-chr q13.2 q32.12 26266 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31802768 + C2 chr6 31868874 + Exonic hg19 COAD TCGA-A6-2671-01A 5 0 Out-of-frame Intra-chr p21.33 26267 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC10-RPL31P50 DNAJC10 chr2 183653145 + RPL31P50 chr12 31750085 - Exonic hg19 COAD TCGA-A6-2671-01A 5 0 Out-of-frame Inter-chr q32.1 p11.21 26268 ChimerSeq STARFusion TCGA_RNA-Seq RLBP1-IFITM1 RLBP1 chr15 89754987 - IFITM1 chr11 314942 + Exonic hg19 COAD TCGA-A6-2671-01A 5 0 Out-of-frame Inter-chr q26.1 p15.5 Oncogene 26269 ChimerSeq STARFusion TCGA_RNA-Seq RLBP1-IFITM2 RLBP1 chr15 89754987 - IFITM2 chr11 309033 + Exonic hg19 COAD TCGA-A6-2671-01A 5 0 Out-of-frame Inter-chr q26.1 p15.5 26270 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 COAD TCGA-A6-2671-01A 5 0 Out-of-frame Inter-chr p13.13 q13.1 26271 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1107-PPDPF KIAA1107 chr1 92633439 + PPDPF chr20 62153106 + Exonic hg19 COAD TCGA-A6-2671-01A 4 0 Out-of-frame Inter-chr p22.1 q13.33 26272 ChimerSeq STARFusion TCGA_RNA-Seq SNRPD2-FBXO46 SNRPD2 chr19 46191792 - FBXO46 chr19 46214822 - Exonic hg19 COAD TCGA-A6-2671-01A 4 0 Out-of-frame Intra-chr q13.32 q13.32 26273 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-HSPA1A ZBTB12 chr6 31868874 - HSPA1A chr6 31784317 + Exonic hg19 COAD TCGA-A6-2671-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 26274 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868873 - SLC44A4 chr6 31831427 - Exonic hg19 COAD TCGA-A6-2671-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 26275 ChimerSeq STARFusion TCGA_RNA-Seq BEST1-MFN2 BEST1 chr11 61732884 + MFN2 chr1 12064578 + Exonic hg19 COAD TCGA-CM-4748-01A 3 0 Out-of-frame Inter-chr q12.3 p36.22 26276 ChimerSeq STARFusion TCGA_RNA-Seq CALM3-ATP5G2 CALM3 chr19 47112471 + ATP5G2 chr12 54062963 - Exonic hg19 COAD TCGA-CM-4748-01A 3 0 Out-of-frame Inter-chr q13.32 q13.13 26277 ChimerSeq STARFusion TCGA_RNA-Seq IQGAP1-YWHAZ IQGAP1 chr15 91016227 + YWHAZ chr8 101964217 - Exonic hg19 COAD TCGA-CM-4748-01A 3 0 Out-of-frame Inter-chr q26.1 q22.3 26278 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-RPS12 MALAT1 chr11 65267132 + RPS12 chr6 133138110 + Exonic hg19 COAD TCGA-CM-4748-01A 3 0 Out-of-frame Inter-chr q13.1 q23.2 26279 ChimerSeq STARFusion TCGA_RNA-Seq PTMS-KLF3 PTMS chr12 6878840 + KLF3 chr4 38696436 + Exonic hg19 COAD TCGA-CM-4748-01A 3 0 Out-of-frame Inter-chr p13.31 p14 Transcription factor 26280 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-UBE2D2 MATR3 chr5 138629494 + UBE2D2 chr5 138979957 + Exonic hg19 COAD TCGA-CM-4748-01A 2 0 5'UTR-5'UTR Intra-chr q31.2 q31.2 Seq+ 26281 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-MALAT1 RNA45S5 chrUn_gl000220 118506 + MALAT1 chr11 65272268 + Exonic hg19 COAD TCGA-A6-6781-01B 3 27 Out-of-frame Inter-chr q13.1 26282 ChimerSeq STARFusion TCGA_RNA-Seq TRNAU1AP-PTPRU TRNAU1AP chr1 28880249 + PTPRU chr1 29618381 + Exonic hg19 COAD TCGA-D5-6931-01A 9 26 In-Frame Intra-chr p35.3 p35.3 Seq+ 26283 ChimerSeq STARFusion TCGA_RNA-Seq NPDC1-IGH@ NPDC1 chr9 139940322 - IGH@ chr14 106330058 - Exonic hg19 COAD TCGA-D5-6931-01A 5 1 Out-of-frame Inter-chr q34.3 32.33 26284 ChimerSeq STARFusion TCGA_RNA-Seq DSP-HDLBP DSP chr6 7575721 + HDLBP chr2 242170359 - Exonic hg19 COAD TCGA-DM-A0X9-01A 2 43 Out-of-frame Inter-chr p24.3 Tumor suppressor gene q37.3 Seq+ 26285 ChimerSeq STARFusion TCGA_RNA-Seq HDLBP-DSP HDLBP chr2 242173235 - DSP chr6 7576527 + Exonic hg19 COAD TCGA-DM-A0X9-01A 2 18 Out-of-frame Inter-chr q37.3 p24.3 Tumor suppressor gene Seq+ 26286 ChimerSeq STARFusion TCGA_RNA-Seq CCDC144A-IGHJ5 CCDC144A chr17 16677362 + IGHJ5 chr14 106330066 - Exonic hg19 COAD TCGA-AA-3949-01A 3 0 Out-of-frame Inter-chr p11.2 26287 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 COAD TCGA-A6-2680-01A 5 0 Out-of-frame Inter-chr p22.1 26288 ChimerSeq STARFusion TCGA_RNA-Seq NEAT1-COL6A1 NEAT1 chr11 65192789 + COL6A1 chr21 47412104 + Exonic hg19 COAD TCGA-A6-2680-01A 4 0 Out-of-frame Inter-chr q13.1 q22.3 26289 ChimerSeq STARFusion TCGA_RNA-Seq ATP5G1-RAB1B ATP5G1 chr17 46972550 + RAB1B chr11 66036102 + Exonic hg19 COAD TCGA-A6-2680-01A 3 0 Out-of-frame Inter-chr q21.32 q13.2 26290 ChimerSeq STARFusion TCGA_RNA-Seq EDF1-FAM159B EDF1 chr9 139757358 - FAM159B chr5 63986324 + Exonic hg19 COAD TCGA-A6-2680-01A 3 0 CDS-5'UTR Inter-chr q34.3 q12.3 26291 ChimerSeq STARFusion TCGA_RNA-Seq EFHD2-CYB5R3 EFHD2 chr1 15755610 + CYB5R3 chr22 43015854 - Exonic hg19 COAD TCGA-A6-2680-01A 3 0 Out-of-frame Inter-chr p36.21 q13.2 26292 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 COAD TCGA-A6-2680-01A 3 0 Out-of-frame Inter-chr p13.13 q13.1 26293 ChimerSeq STARFusion TCGA_RNA-Seq LINC00238-GPHN LINC00238 chr14 66964885 + GPHN chr14 67147825 + Exonic hg19 COAD TCGA-DM-A28C-01A 2 3 5'UTR-CDS Intra-chr q23.3 q23.3 26294 ChimerSeq STARFusion TCGA_RNA-Seq FOXN3-CDKL1 FOXN3 chr14 89878278 - CDKL1 chr14 50796899 - Exonic hg19 COAD TCGA-A6-5667-01A 15 38 In-Frame Intra-chr q32.11 Transcription factor q22.1 CMGC:CDKL Seq+ 26295 ChimerSeq STARFusion TCGA_RNA-Seq BAIAP2L1-DMTF1 BAIAP2L1 chr7 98030114 - DMTF1 chr7 86800311 + Exonic hg19 COAD TCGA-A6-5667-01A 12 13 Out-of-frame Intra-chr q22.1 q21.12 Tumor suppressor gene Transcription factor Seq+ 26296 ChimerSeq STARFusion TCGA_RNA-Seq EIF5A-COX4I1 EIF5A chr17 7214970 + COX4I1 chr16 85840344 + Exonic hg19 COAD TCGA-AZ-4616-01A 2 1 3'UTR-CDS Inter-chr p13.1 q24.1 26297 ChimerSeq STARFusion TCGA_RNA-Seq LMTK2-BAIAP2L1 LMTK2 chr7 97736592 + BAIAP2L1 chr7 97949610 - Exonic hg19 COAD TCGA-AY-4071-01A 9 0 In-Frame Intra-chr q21.3 q22.1 Seq+ 26298 ChimerSeq STARFusion TCGA_RNA-Seq EML4-ALK EML4 chr2 42552694 + ALK chr2 29446394 - Exonic hg19 COAD TCGA-AA-3710-01A 4 0 In-Frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 26299 ChimerSeq STARFusion TCGA_RNA-Seq ANO6-PEBP4 ANO6 chr12 45610174 + PEBP4 chr8 22675248 - Exonic hg19 COAD TCGA-CM-5868-01A 2 9 Out-of-frame Inter-chr q12 p21.3 Seq+ 26300 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF38-PPA2 ARHGEF38 chr4 106474118 + PPA2 chr4 106320321 - Exonic hg19 COAD TCGA-CM-5868-01A 2 1 In-Frame Intra-chr q24 q24 Seq+ 26301 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-ELK2AP GAS6 chr13 114525072 - ELK2AP chr14 106136184 - Exonic hg19 COAD TCGA-F4-6703-01A 3 0 Out-of-frame Inter-chr q34 Oncogene 26302 ChimerSeq STARFusion TCGA_RNA-Seq SYBU-NUDCD1 SYBU chr8 110598289 - NUDCD1 chr8 110257710 - Exonic hg19 COAD TCGA-AZ-6600-01A 9 16 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 26303 ChimerSeq STARFusion TCGA_RNA-Seq SYBU-NUDCD1 SYBU chr8 110631071 - NUDCD1 chr8 110257710 - Exonic hg19 COAD TCGA-AZ-6600-01A 2 16 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 26304 ChimerSeq STARFusion TCGA_RNA-Seq NF1-POLDIP2 NF1 chr17 29592357 + POLDIP2 chr17 26682902 - Exonic hg19 COAD TCGA-AZ-6600-01A 2 3 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 26305 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CUTC IGH@ chr14 107083459 - CUTC chr10 101492236 + Exonic hg19 COAD TCGA-AA-3866-01A 8 0 Out-of-frame Inter-chr 32.33 q24.2 26306 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CUTC IGH@ chr14 106478313 - CUTC chr10 101492236 + Exonic hg19 COAD TCGA-AA-3866-01A 4 0 Out-of-frame Inter-chr 32.33 q24.2 26307 ChimerSeq STARFusion TCGA_RNA-Seq CASP8AP2-HACE1 CASP8AP2 chr6 90566918 + HACE1 chr6 105178291 - Exonic hg19 COAD TCGA-AD-A5EJ-01A 6 18 In-Frame Intra-chr q15 q16.3 Tumor suppressor gene Seq+ 26308 ChimerSeq STARFusion TCGA_RNA-Seq ZNF148-SNX4 ZNF148 chr3 125042153 - SNX4 chr3 125199163 - Exonic hg19 COAD TCGA-CK-5912-01A 2 0 5'UTR-CDS Intra-chr q21.2 Transcription factor q21.2 Seq+ 26309 ChimerSeq STARFusion TCGA_RNA-Seq AIF1L-RPL13AP7 AIF1L chr9 133995770 + RPL13AP7 chr21 26734505 + Exonic hg19 COAD TCGA-AA-A00A-01A 3 0 Out-of-frame Inter-chr q34.12 q21.2 26310 ChimerSeq STARFusion TCGA_RNA-Seq BEST1-ETV5 BEST1 chr11 61732264 + ETV5 chr3 185826703 - Exonic hg19 COAD TCGA-AA-A00A-01A 3 0 Out-of-frame Inter-chr q12.3 q27.2 Oncogene Transcription factor 26311 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC10-RPL31P50 DNAJC10 chr2 183653145 + RPL31P50 chr12 31750085 - Exonic hg19 COAD TCGA-AA-A00A-01A 3 0 Out-of-frame Inter-chr q32.1 p11.21 26312 ChimerSeq STARFusion TCGA_RNA-Seq EDF1-FAM159B EDF1 chr9 139757358 - FAM159B chr5 63986324 + Exonic hg19 COAD TCGA-AA-A00A-01A 3 0 CDS-5'UTR Inter-chr q34.3 q12.3 26313 ChimerSeq STARFusion TCGA_RNA-Seq FTLP15-MAP3K15 FTLP15 chr7 46037210 - MAP3K15 chrX 19533151 - Exonic hg19 COAD TCGA-AA-A00A-01A 3 0 Out-of-frame Inter-chr p12.3 p22.12 26314 ChimerSeq STARFusion TCGA_RNA-Seq TMBIM6-FLNB TMBIM6 chr12 50157226 + FLNB chr3 58131668 + Exonic hg19 COAD TCGA-AA-A00A-01A 3 0 Out-of-frame Inter-chr q13.12 p14.3 26315 ChimerSeq STARFusion TCGA_RNA-Seq QRICH1-C3orf62 QRICH1 chr3 49069616 - C3orf62 chr3 49311573 - Exonic hg19 DLBC TCGA-G8-6909-01A 6 34 In-Frame Intra-chr p21.31 p21.31 Seq+ 26316 ChimerSeq STARFusion TCGA_RNA-Seq BCL6-IGH@ BCL6 chr3 187463198 - IGH@ chr14 106322322 - Exonic hg19 DLBC TCGA-VB-A8QN 14 19 Out-of-frame Inter-chr q27.3 Oncogene Transcription factor 32.33 26317 ChimerSeq STARFusion TCGA_RNA-Seq BCL6-IGHM BCL6 chr3 187463198 - IGHM chr14 106322322 - Exonic hg19 DLBC TCGA-VB-A8QN 14 19 Out-of-frame Inter-chr q27.3 Oncogene Transcription factor q32.33 26318 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-BCL6 IGH@ chr14 106330024 - BCL6 chr3 187452695 - Exonic hg19 DLBC TCGA-VB-A8QN 11 17 Out-of-frame Inter-chr 32.33 q27.3 Oncogene Transcription factor 26319 ChimerSeq STARFusion TCGA_RNA-Seq IGHJ4-BCL6 IGHJ4 chr14 106330425 - BCL6 chr3 187452695 - Exonic hg19 DLBC TCGA-VB-A8QN 11 13 Out-of-frame Inter-chr q27.3 Oncogene Transcription factor 26320 ChimerSeq STARFusion TCGA_RNA-Seq ERLIN1-DOCK1 ERLIN1 chr10 101933965 - DOCK1 chr10 129201319 + Exonic hg19 DLBC TCGA-VB-A8QN 5 20 In-Frame Intra-chr q24.31 q26.2 Seq+ 26321 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-BCL6 IGH@ chr14 106330425 - BCL6 chr3 187452695 - Exonic hg19 DLBC TCGA-VB-A8QN 5 15 Out-of-frame Inter-chr 32.33 q27.3 Oncogene Transcription factor 26322 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-BCL6 IGH@ chr14 106329408 - BCL6 chr3 187452695 - Exonic hg19 DLBC TCGA-VB-A8QN 2 17 Out-of-frame Inter-chr 32.33 q27.3 Oncogene Transcription factor 26323 ChimerSeq STARFusion TCGA_RNA-Seq GPATCH8-ATXN7L3 GPATCH8 chr17 42541840 - ATXN7L3 chr17 42275498 - Exonic hg19 DLBC TCGA-VB-A8QN 4 7 CDS-5'UTR Intra-chr q21.31 q21.31 Seq+ 26324 ChimerSeq STARFusion TCGA_RNA-Seq GMDS-PPP1R11 GMDS chr6 1930337 - PPP1R11 chr6 30036367 + Exonic hg19 DLBC TCGA-VB-A8QN 3 9 In-Frame Intra-chr p25.3 Seq+ 26325 ChimerSeq STARFusion TCGA_RNA-Seq BCL6-RHOH BCL6 chr3 187463198 - RHOH chr4 40244334 + Exonic hg19 DLBC TCGA-G8-6906-01A 23 32 5'UTR-5'UTR Inter-chr q27.3 Oncogene Transcription factor p14 Oncogene KB Seq+ 26326 ChimerSeq STARFusion TCGA_RNA-Seq SOCS1-MYC SOCS1 chr16 11349936 - MYC chr8 128750497 + Exonic hg19 DLBC TCGA-FA-A7Q1 11 29 5'UTR-CDS Inter-chr p13.13 Oncogene Tumor suppressor gene q24.21 Oncogene Transcription factor Seq+ 26327 ChimerSeq STARFusion TCGA_RNA-Seq P2RX4-CAMKK2 P2RX4 chr12 121648101 + CAMKK2 chr12 121712388 - Exonic hg19 DLBC TCGA-FA-A7Q1 2 7 5'UTR-5'UTR Intra-chr q24.31 q24.31 26328 ChimerSeq STARFusion TCGA_RNA-Seq FOXP1-ACTN4 FOXP1 chr3 71247353 - ACTN4 chr19 39217597 + Exonic hg19 DLBC TCGA-GS-A9TU 2 7 In-Frame Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 26329 ChimerSeq STARFusion TCGA_RNA-Seq AICDA-SLC9A7 AICDA chr12 8765356 - SLC9A7 chrX 46541970 - Exonic hg19 DLBC TCGA-GS-A9TW 38 49 Out-of-frame Inter-chr p13.31 p11.3 Seq+ 26330 ChimerSeq STARFusion TCGA_RNA-Seq VAV2-FNBP1 VAV2 chr9 136857197 - FNBP1 chr9 132757237 - Exonic hg19 DLBC TCGA-GS-A9TW 19 50 In-Frame Intra-chr q34.2 q34.11 Seq+ 26331 ChimerSeq STARFusion TCGA_RNA-Seq RFC1-PDS5A RFC1 chr4 39328183 - PDS5A chr4 39827108 - Exonic hg19 DLBC TCGA-GS-A9TV 64 137 Out-of-frame Intra-chr p14 p14 Seq+ 26332 ChimerSeq STARFusion TCGA_RNA-Seq FAM53B-PROSER2 FAM53B chr10 126384727 - PROSER2 chr10 11908530 + Exonic hg19 DLBC TCGA-GS-A9TV 3 12 Out-of-frame Intra-chr q26.13 p14 Seq+ 26333 ChimerSeq STARFusion TCGA_RNA-Seq SPIDR-CSMD3 SPIDR chr8 48511758 + CSMD3 chr8 113569183 - Exonic hg19 DLBC TCGA-GS-A9TQ 4 7 Out-of-frame Intra-chr q11.21 q23.3 Oncogene Seq+ 26334 ChimerSeq STARFusion TCGA_RNA-Seq BCL6-IGH@ BCL6 chr3 187463198 - IGH@ chr14 106209407 - Exonic hg19 DLBC TCGA-GS-A9TY 15 16 Out-of-frame Inter-chr q27.3 Oncogene Transcription factor 32.33 26335 ChimerSeq STARFusion TCGA_RNA-Seq BCL6-IGHG1 BCL6 chr3 187463198 - IGHG1 chr14 106209407 - Exonic hg19 DLBC TCGA-GS-A9TY 15 13 Out-of-frame Inter-chr q27.3 Oncogene Transcription factor q32.33 Seq+ 26336 ChimerSeq STARFusion TCGA_RNA-Seq BCL6-IGH@ BCL6 chr3 187463198 - IGH@ chr14 106136181 - Exonic hg19 DLBC TCGA-GS-A9TY 13 16 Out-of-frame Inter-chr q27.3 Oncogene Transcription factor 32.33 26337 ChimerSeq STARFusion TCGA_RNA-Seq BCL6-IGH@ BCL6 chr3 187463198 - IGH@ chr14 106237742 - Exonic hg19 DLBC TCGA-GS-A9TY 11 16 Out-of-frame Inter-chr q27.3 Oncogene Transcription factor 32.33 26338 ChimerSeq STARFusion TCGA_RNA-Seq BCL6-IGHG1 BCL6 chr3 187463198 - IGHG1 chr14 106237742 - Exonic hg19 DLBC TCGA-GS-A9TY 10 13 Out-of-frame Inter-chr q27.3 Oncogene Transcription factor q32.33 Seq+ 26339 ChimerSeq STARFusion TCGA_RNA-Seq BCL6-IGH@ BCL6 chr3 187463198 - IGH@ chr14 106092402 - Exonic hg19 DLBC TCGA-GS-A9TY 8 16 Out-of-frame Inter-chr q27.3 Oncogene Transcription factor 32.33 26340 ChimerSeq STARFusion TCGA_RNA-Seq CIR1-AGPS CIR1 chr2 175216347 - AGPS chr2 178402802 + Exonic hg19 DLBC TCGA-GS-A9TY 4 20 Out-of-frame Intra-chr q31.1 q31.2 Seq+ 26341 ChimerSeq STARFusion TCGA_RNA-Seq FSD1-HDGFRP2 FSD1 chr19 4306326 + HDGFRP2 chr19 4501203 + Exonic hg19 DLBC TCGA-GS-A9TY 4 10 Out-of-frame Intra-chr p13.3 26342 ChimerSeq STARFusion TCGA_RNA-Seq FAM221A-KLHL7 FAM221A chr7 23731215 + KLHL7 chr7 23157453 + Exonic hg19 DLBC TCGA-GS-A9TY 2 6 CDS-5'UTR Intra-chr p15.3 p15.3 Seq+ 26343 ChimerSeq STARFusion TCGA_RNA-Seq CIITA-PRDM16 CIITA chr16 10971239 + PRDM16 chr1 3301716 + Exonic hg19 DLBC TCGA-GS-A9TZ 235 902 Out-of-frame Inter-chr p13.13 p36.32 Transcription factor Seq+ 26344 ChimerSeq STARFusion TCGA_RNA-Seq RBM27-LARS RBM27 chr5 145583387 + LARS chr5 145557228 - Exonic hg19 DLBC TCGA-FA-A7DS 10 22 Out-of-frame Intra-chr q32 q32 Seq+ 26345 ChimerSeq STARFusion TCGA_RNA-Seq UHRF1-KDM4B UHRF1 chr19 4941943 + KDM4B chr19 5047487 + Exonic hg19 DLBC TCGA-FA-A7DS 6 9 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 26346 ChimerSeq STARFusion TCGA_RNA-Seq SLC44A2-SMARCA4 SLC44A2 chr19 10738680 + SMARCA4 chr19 11094800 + Exonic hg19 DLBC TCGA-FA-A7DS 3 16 CDS-5'UTR Intra-chr p13.2 p13.2 Oncogene Tumor suppressor gene 26347 ChimerSeq STARFusion TCGA_RNA-Seq AHDC1-WASF2 AHDC1 chr1 27929908 - WASF2 chr1 27755443 - Exonic hg19 DLBC TCGA-FA-A7DS 2 10 5'UTR-5'UTR Intra-chr p35.3 Transcription factor p36.11 Seq+ 26348 ChimerSeq STARFusion TCGA_RNA-Seq PARG-BMS1 PARG chr10 51093249 - BMS1 chr10 43287075 + Exonic hg19 DLBC TCGA-FA-A7DS 2 4 In-Frame Intra-chr q11.23 q11.21 26349 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CASC11 IGH@ chr14 106329408 - CASC11 chr8 128746205 - Exonic hg19 DLBC TCGA-FF-8046-01A 4 7 Out-of-frame Inter-chr 32.33 q24.21 26350 ChimerSeq STARFusion TCGA_RNA-Seq IGHJ6-CASC11 IGHJ6 chr14 106329408 - CASC11 chr8 128746205 - Exonic hg19 DLBC TCGA-FF-8046-01A 4 4 Out-of-frame Inter-chr q24.21 26351 ChimerSeq STARFusion TCGA_RNA-Seq LRP8-RPL14 LRP8 chr1 53793534 - RPL14 chr3 40503521 + Exonic hg19 DLBC TCGA-FF-8046-01A 4 1 Out-of-frame Inter-chr p32.3 p22.1 26352 ChimerSeq STARFusion TCGA_RNA-Seq ASH1L-ZNF687 ASH1L chr1 155531944 - ZNF687 chr1 151263191 + Exonic hg19 DLBC TCGA-FF-8043-01A 12 34 5'UTR-CDS Intra-chr q22 Transcription factor q21.3 Transcription factor Seq+ 26353 ChimerSeq STARFusion TCGA_RNA-Seq SNX29-LITAF SNX29 chr16 12371893 + LITAF chr16 11650591 - Exonic hg19 DLBC TCGA-FF-8043-01A 4 30 CDS-5'UTR Intra-chr p13.13 p13.13 Tumor suppressor gene Seq+ 26354 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R12A-EIF2S3L PPP1R12A chr12 80266588 - EIF2S3L chr12 10675202 + Exonic hg19 DLBC TCGA-FF-8043-01A 2 28 Out-of-frame Intra-chr q21.31 Seq+ 26355 ChimerSeq STARFusion TCGA_RNA-Seq SERTAD2-DEFB124 SERTAD2 chr2 64977415 - DEFB124 chr20 30060841 - Exonic hg19 DLBC TCGA-FF-8043-01A 3 10 Out-of-frame Inter-chr p14 q11.21 Seq+ 26356 ChimerSeq STARFusion TCGA_RNA-Seq RIPK1-SERPINB9 RIPK1 chr6 3064293 + SERPINB9 chr6 2900855 - Exonic hg19 DLBC TCGA-GR-A4D9-01B 16 6 5'UTR-5'UTR Intra-chr p25.2 TKL:RIPK p25.2 26357 ChimerSeq STARFusion TCGA_RNA-Seq CXCR4-CFLAR CXCR4 chr2 136875616 - CFLAR chr2 201994452 + Exonic hg19 DLBC TCGA-FA-A6HN-01A 17 111 CDS-5'UTR Intra-chr q22.1 q33.1 Seq+ 26358 ChimerSeq STARFusion TCGA_RNA-Seq CXCR4-CFLAR CXCR4 chr2 136875616 - CFLAR chr2 201997752 + Exonic hg19 DLBC TCGA-FA-A6HN-01A 3 111 Out-of-frame Intra-chr q22.1 q33.1 Seq+ 26359 ChimerSeq STARFusion TCGA_RNA-Seq MAST2-NASP MAST2 chr1 46348067 + NASP chr1 46056895 + Exonic hg19 DLBC TCGA-FA-A6HN-01A 9 30 In-Frame Intra-chr p34.1 AGC:MAST p34.1 Seq+ 26360 ChimerSeq STARFusion TCGA_RNA-Seq PTBP1-PALM PTBP1 chr19 804438 + PALM chr19 726138 + Exonic hg19 DLBC TCGA-FF-8047-01A 7 41 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 26361 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-BCL6 IGH@ chr14 106330024 - BCL6 chr3 187452695 - Exonic hg19 DLBC TCGA-FF-8047-01A 6 5 Out-of-frame Inter-chr 32.33 q27.3 Oncogene Transcription factor 26362 ChimerSeq STARFusion TCGA_RNA-Seq HOXB3-PITPNC1 HOXB3 chr17 46681842 - PITPNC1 chr17 65528918 + Exonic hg19 DLBC TCGA-FF-8047-01A 2 18 5'UTR-CDS Intra-chr q21.32 Transcription factor q24.2 Seq+ 26363 ChimerSeq STARFusion TCGA_RNA-Seq HOXB6-PITPNC1 HOXB6 chr17 46681842 - PITPNC1 chr17 65528918 + Exonic hg19 DLBC TCGA-FF-8047-01A 2 18 5'UTR-CDS Intra-chr q21.32 Transcription factor q24.2 Seq+ 26364 ChimerSeq STARFusion TCGA_RNA-Seq IGHJ4-BCL6 IGHJ4 chr14 106330425 - BCL6 chr3 187452695 - Exonic hg19 DLBC TCGA-FF-8047-01A 6 2 Out-of-frame Inter-chr q27.3 Oncogene Transcription factor 26365 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-BCL6 IGH@ chr14 106330425 - BCL6 chr3 187452695 - Exonic hg19 DLBC TCGA-FF-8047-01A 3 5 Out-of-frame Inter-chr 32.33 q27.3 Oncogene Transcription factor 26366 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-BCL6 IGH@ chr14 106329408 - BCL6 chr3 187452695 - Exonic hg19 DLBC TCGA-FF-8047-01A 2 5 Out-of-frame Inter-chr 32.33 q27.3 Oncogene Transcription factor 26367 ChimerSeq STARFusion TCGA_RNA-Seq AMBRA1-PHF21A AMBRA1 chr11 46563495 - PHF21A chr11 46113774 - Exonic hg19 DLBC TCGA-FF-A7CX 4 4 CDS-5'UTR Intra-chr p11.2 p11.2 Transcription factor 26368 ChimerSeq STARFusion TCGA_RNA-Seq C1orf132-FAM72A C1orf132 chr1 207989274 - FAM72A chr1 206141446 + Exonic hg19 DLBC TCGA-RQ-A6JB-01A 5 21 Out-of-frame Intra-chr q32.2 q32.1 Seq+ 26369 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2A-GIPC1 GATAD2A chr19 19576423 + GIPC1 chr19 14603724 - Exonic hg19 DLBC TCGA-RQ-A6JB-01A 3 17 CDS-5'UTR Intra-chr p13.11 Transcription factor p13.12 Seq+ 26370 ChimerSeq STARFusion TCGA_RNA-Seq ASF1B-KLF1 ASF1B chr19 14236933 - KLF1 chr19 12996626 - Exonic hg19 DLBC TCGA-RQ-A6JB-01A 4 6 Out-of-frame Intra-chr p13.12 p13.13 Transcription factor Seq+ 26371 ChimerSeq STARFusion TCGA_RNA-Seq FHIT-KHDRBS3 FHIT chr3 61027719 - KHDRBS3 chr8 136554897 + Exonic hg19 DLBC TCGA-FF-A7CQ 4 34 5'UTR-CDS Inter-chr p14.2 Tumor suppressor gene q24.23 Seq+ 26372 ChimerSeq STARFusion TCGA_RNA-Seq LRP5-PPP6R3 LRP5 chr11 68183992 + PPP6R3 chr11 68286966 + Exonic hg19 DLBC TCGA-FF-A7CQ 5 3 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 26373 ChimerSeq STARFusion TCGA_RNA-Seq CD80-WDR52 CD80 chr3 119276476 - WDR52 chr3 113152516 - Exonic hg19 DLBC TCGA-FF-A7CQ 2 8 CDS-5'UTR Intra-chr q13.33 Seq+ 26374 ChimerSeq STARFusion TCGA_RNA-Seq MIR142-IGH@ MIR142 chr17 56409831 - IGH@ chr14 106173899 - Exonic hg19 DLBC TCGA-FF-A7CR 2450 1015 Out-of-frame Inter-chr q22 Tumor suppressor gene 32.33 26375 ChimerSeq STARFusion TCGA_RNA-Seq MIR142-IGHA1 MIR142 chr17 56409831 - IGHA1 chr14 106173899 - Exonic hg19 DLBC TCGA-FF-A7CR 2450 736 Out-of-frame Inter-chr q22 Tumor suppressor gene 26376 ChimerSeq STARFusion TCGA_RNA-Seq MIR142-IGH@ MIR142 chr17 56409831 - IGH@ chr14 106053668 - Exonic hg19 DLBC TCGA-FF-A7CR 1538 713 Out-of-frame Inter-chr q22 Tumor suppressor gene 32.33 26377 ChimerSeq STARFusion TCGA_RNA-Seq LINC00621-SLC25A13 LINC00621 chr13 23489857 - SLC25A13 chr7 95751031 - Exonic hg19 DLBC TCGA-FF-A7CR 4 4 Out-of-frame Inter-chr q12.12 q21.3 26378 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-TP73 TBL1XR1 chr3 176771561 - TP73 chr1 3624113 + Exonic hg19 DLBC TCGA-FA-A4XK-01A 22 43 In-Frame Inter-chr q26.32 p36.32 Tumor suppressor gene Transcription factor Seq+ 26379 ChimerSeq STARFusion TCGA_RNA-Seq FUT10-TTI2 FUT10 chr8 33330582 - TTI2 chr8 33361453 - Exonic hg19 DLBC TCGA-G8-6324-01A 3 3 5'UTR-CDS Intra-chr p12 p12 26380 ChimerSeq STARFusion TCGA_RNA-Seq ING1-CARKD ING1 chr13 111366632 + CARKD chr13 111274563 + Exonic hg19 DLBC TCGA-GR-A4D4-01A 16 45 In-Frame Intra-chr q34 Tumor suppressor gene Seq+ 26381 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 DLBC TCGA-GR-A4D4-01A 15 6 In-Frame Intra-chr p13.3 p13.3 26382 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 DLBC TCGA-G8-6914-01A 12 0 Out-of-frame Inter-chr q13.33 p21.1 26383 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469662 + FTH1P27 chrX 37364954 + Exonic hg19 DLBC TCGA-FA-8693-01A 13 0 Out-of-frame Inter-chr q13.33 p21.1 26384 ChimerSeq STARFusion TCGA_RNA-Seq LARS2-ANO10 LARS2 chr3 45542071 + ANO10 chr3 43408466 - Exonic hg19 DLBC TCGA-FA-8693-01A 5 27 Out-of-frame Intra-chr p21.31 p21.33 Seq+ 26385 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 DLBC TCGA-G8-6326-01A 36 0 Out-of-frame Inter-chr q13.33 p21.1 26386 ChimerSeq STARFusion TCGA_RNA-Seq REL-PUS10 REL chr2 61149134 + PUS10 chr2 61172243 - Exonic hg19 DLBC TCGA-FA-A82F 8 27 Out-of-frame Intra-chr p16.1 Oncogene Transcription factor p15 Seq+ 26387 ChimerSeq STARFusion TCGA_RNA-Seq REL-PUS10 REL chr2 61147244 + PUS10 chr2 61172243 - Exonic hg19 DLBC TCGA-FA-A82F 2 27 Out-of-frame Intra-chr p16.1 Oncogene Transcription factor p15 Seq+ 26388 ChimerSeq STARFusion TCGA_RNA-Seq COX19-HEATR2 COX19 chr7 1015064 - HEATR2 chr7 810108 + Exonic hg19 DLBC TCGA-FA-A82F 2 5 In-Frame Intra-chr p22.3 Seq+ 26389 ChimerSeq STARFusion TCGA_RNA-Seq RIPK1-SERPINB9 RIPK1 chr6 3064293 + SERPINB9 chr6 2900855 - Exonic hg19 DLBC TCGA-FA-A86F 8 4 5'UTR-5'UTR Intra-chr p25.2 TKL:RIPK p25.2 26390 ChimerSeq STARFusion TCGA_RNA-Seq CXCR4-IGH@ CXCR4 chr2 136875616 - IGH@ chr14 106054731 - Exonic hg19 DLBC TCGA-FA-A86F 5 13 Out-of-frame Inter-chr q22.1 32.33 26391 ChimerSeq STARFusion TCGA_RNA-Seq CXCR4-IGHA2 CXCR4 chr2 136875616 - IGHA2 chr14 106054731 - Exonic hg19 DLBC TCGA-FA-A86F 5 13 Out-of-frame Inter-chr q22.1 Seq+ 26392 ChimerSeq STARFusion TCGA_RNA-Seq CXCR4-IGH@ CXCR4 chr2 136875616 - IGH@ chr14 106175001 - Exonic hg19 DLBC TCGA-FA-A86F 4 13 Out-of-frame Inter-chr q22.1 32.33 26393 ChimerSeq STARFusion TCGA_RNA-Seq NR2C2-PARL NR2C2 chr3 14989413 + PARL chr3 183585848 - Exonic hg19 ESCA TCGA-R6-A6Y2 133 51 5'UTR-CDS Intra-chr p25.1 Tumor suppressor gene Transcription factor q27.1 Seq+ 26394 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHM2-IGF2BP2 PLEKHM2 chr1 16046415 + IGF2BP2 chr3 185410550 - Exonic hg19 ESCA TCGA-R6-A6Y2 72 19 In-Frame Inter-chr p36.21 q27.2 Seq+ 26395 ChimerSeq STARFusion TCGA_RNA-Seq TAF15-ZNHIT3 TAF15 chr17 34136580 + ZNHIT3 chr17 34848657 + Exonic hg19 ESCA TCGA-R6-A6Y2 44 36 In-Frame Intra-chr q12 q12 Seq+ 26396 ChimerSeq STARFusion TCGA_RNA-Seq TAF15-ZNHIT3 TAF15 chr17 34136580 + ZNHIT3 chr17 34842779 + Exonic hg19 ESCA TCGA-R6-A6Y2 8 36 Out-of-frame Intra-chr q12 q12 Seq+ 26397 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB17-CROCC ZBTB17 chr1 16299534 - CROCC chr1 17263132 + Exonic hg19 ESCA TCGA-R6-A6Y2 16 3 5'UTR-CDS Intra-chr p36.13 Transcription factor p36.13 Seq+ 26398 ChimerSeq STARFusion TCGA_RNA-Seq SPTAN1-C9orf16 SPTAN1 chr9 131378005 + C9orf16 chr9 130924126 + Exonic hg19 ESCA TCGA-R6-A6Y0 57 49 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 26399 ChimerSeq STARFusion TCGA_RNA-Seq RNF24-SNRPD3 RNF24 chr20 3996084 - SNRPD3 chr22 24963952 + Exonic hg19 ESCA TCGA-R6-A6Y0 12 54 5'UTR-CDS Inter-chr p13 q11.23 Seq+ 26400 ChimerSeq STARFusion TCGA_RNA-Seq DDX50-STOX1 DDX50 chr10 70679737 + STOX1 chr10 70652345 + Exonic hg19 ESCA TCGA-R6-A6Y0 24 5 In-Frame Intra-chr q22.1 q22.1 Seq+ 26401 ChimerSeq STARFusion TCGA_RNA-Seq RALGAPB-CTNNBL1 RALGAPB chr20 37169835 + CTNNBL1 chr20 36488301 + Exonic hg19 ESCA TCGA-R6-A6Y0 23 5 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 26402 ChimerSeq STARFusion TCGA_RNA-Seq TMEM184B-BAIAP2L2 TMEM184B chr22 38668890 - BAIAP2L2 chr22 38483271 - Exonic hg19 ESCA TCGA-R6-A6Y0 14 17 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 26403 ChimerSeq STARFusion TCGA_RNA-Seq RNF24-SNRPD3 RNF24 chr20 3995848 - SNRPD3 chr22 24963952 + Exonic hg19 ESCA TCGA-R6-A6Y0 3 54 5'UTR-CDS Inter-chr p13 q11.23 Seq+ 26404 ChimerSeq STARFusion TCGA_RNA-Seq TET2-ARHGEF38 TET2 chr4 106068136 + ARHGEF38 chr4 106626471 + Exonic hg19 ESCA TCGA-R6-A6Y0 10 18 5'UTR-3'UTR Intra-chr q24 Oncogene Tumor suppressor gene Transcription factor q24 Seq+ 26405 ChimerSeq STARFusion TCGA_RNA-Seq LPIN2-DLGAP1 LPIN2 chr18 3013085 - DLGAP1 chr18 3582246 - Exonic hg19 ESCA TCGA-R6-A6Y0 13 3 5'UTR-CDS Intra-chr p11.31 p11.31 Seq+ 26406 ChimerSeq STARFusion TCGA_RNA-Seq TET2-ARHGEF38 TET2 chr4 106068136 + ARHGEF38 chr4 106627460 + Exonic hg19 ESCA TCGA-R6-A6Y0 9 18 5'UTR-3'UTR Intra-chr q24 Oncogene Tumor suppressor gene Transcription factor q24 Seq+ 26407 ChimerSeq STARFusion TCGA_RNA-Seq SPRED2-RAB1A SPRED2 chr2 65659096 - RAB1A chr2 65331940 - Exonic hg19 ESCA TCGA-R6-A6Y0 10 6 In-Frame Intra-chr p14 p14 Seq+ 26408 ChimerSeq STARFusion TCGA_RNA-Seq TET3-ACTG2 TET3 chr2 74230293 + ACTG2 chr2 74140612 + Exonic hg19 ESCA TCGA-R6-A6Y0 11 2 5'UTR-CDS Intra-chr p13.1 Transcription factor p13.1 Seq+ 26409 ChimerSeq STARFusion TCGA_RNA-Seq PRKCA-CACNG5 PRKCA chr17 64302245 + CACNG5 chr17 64873348 + Exonic hg19 ESCA TCGA-R6-A6Y0 10 4 CDS-5'UTR Intra-chr q24.2 q24.2 Seq+ 26410 ChimerSeq STARFusion TCGA_RNA-Seq MAFK-KCTD5 MAFK chr7 1570534 + KCTD5 chr16 2752354 + Exonic hg19 ESCA TCGA-R6-A6Y0 7 9 5'UTR-CDS Inter-chr p22.3 Transcription factor p13.3 Seq+ 26411 ChimerSeq STARFusion TCGA_RNA-Seq MAFK-KCTD5 MAFK chr7 1570534 + KCTD5 chr16 2745936 + Exonic hg19 ESCA TCGA-R6-A6Y0 5 8 5'UTR-CDS Inter-chr p22.3 Transcription factor p13.3 Seq+ 26412 ChimerSeq STARFusion TCGA_RNA-Seq TET2-ARHGEF38 TET2 chr4 106068136 + ARHGEF38 chr4 106621345 + Exonic hg19 ESCA TCGA-R6-A6Y0 2 18 5'UTR-3'UTR Intra-chr q24 Oncogene Tumor suppressor gene Transcription factor q24 Seq+ 26413 ChimerSeq STARFusion TCGA_RNA-Seq ATP7B-KLF5 ATP7B chr13 52585423 - KLF5 chr13 73635999 + Exonic hg19 ESCA TCGA-LN-A7HX 46 12 In-Frame Intra-chr q14.3 q22.1 Tumor suppressor gene Transcription factor Seq+ 26414 ChimerSeq STARFusion TCGA_RNA-Seq ATP2C1-NEK11 ATP2C1 chr3 130688240 + NEK11 chr3 131068401 + Exonic hg19 ESCA TCGA-LN-A7HX 32 15 Out-of-frame Intra-chr q22.1 q22.1 Other:NEK Seq+ 26415 ChimerSeq STARFusion TCGA_RNA-Seq PPIP5K1-KRT6A PPIP5K1 chr15 43850993 - KRT6A chr12 52887011 - Exonic hg19 ESCA TCGA-LN-A7HX 12 3 CDS-5'UTR Inter-chr q15.3 q13.13 26416 ChimerSeq STARFusion TCGA_RNA-Seq ATP2C1-NEK11 ATP2C1 chr3 130686263 + NEK11 chr3 131068401 + Exonic hg19 ESCA TCGA-LN-A7HX 7 15 Out-of-frame Intra-chr q22.1 q22.1 Other:NEK Seq+ 26417 ChimerSeq STARFusion TCGA_RNA-Seq SPIDR-POMGNT2 SPIDR chr8 48203726 + POMGNT2 chr3 43123028 - Exonic hg19 ESCA TCGA-Q9-A6FU 98 10 Out-of-frame Inter-chr q11.21 p22.1 Seq+ 26418 ChimerSeq STARFusion TCGA_RNA-Seq ERBB3-EGFR ERBB3 chr12 56492359 + EGFR chr7 55266410 + Exonic hg19 ESCA TCGA-Q9-A6FU 71 0 In-Frame Inter-chr q13.2 Oncogene p11.2 TK:EGFR Oncogene 26419 ChimerSeq STARFusion TCGA_RNA-Seq MEX3D-TCF3 MEX3D chr19 1567463 - TCF3 chr19 1646426 - Exonic hg19 ESCA TCGA-Q9-A6FU 37 6 Out-of-frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Transcription factor Seq+ 26420 ChimerSeq STARFusion TCGA_RNA-Seq GAB1-PPP2R2C GAB1 chr4 144361535 + PPP2R2C chr4 6349737 - Exonic hg19 ESCA TCGA-Q9-A6FU 24 7 In-Frame Intra-chr q31.21 p16.1 Tumor suppressor gene Seq+ 26421 ChimerSeq STARFusion TCGA_RNA-Seq USP37-TMBIM1 USP37 chr2 219339353 - TMBIM1 chr2 219146904 - Exonic hg19 ESCA TCGA-Q9-A6FU 15 2 CDS-5'UTR Intra-chr q35 q35 Seq+ 26422 ChimerSeq STARFusion TCGA_RNA-Seq DMBT1-ARMS2 DMBT1 chr10 124380896 + ARMS2 chr10 124216423 + Exonic hg19 ESCA TCGA-Q9-A6FW 100 44 Out-of-frame Intra-chr q26.13 Tumor suppressor gene q26.13 Seq+ 26423 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K10-DMKN MAP3K10 chr19 40718753 + DMKN chr19 36002422 - Exonic hg19 ESCA TCGA-KH-A6WC 40 0 Out-of-frame Intra-chr q13.2 q13.12 26424 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K10-DMKN MAP3K10 chr19 40718756 + DMKN chr19 36002431 - Exonic hg19 ESCA TCGA-KH-A6WC 13 0 Out-of-frame Intra-chr q13.2 q13.12 26425 ChimerSeq STARFusion TCGA_RNA-Seq MBNL1-IGH@ MBNL1 chr3 151986628 + IGH@ chr14 106330070 - Exonic hg19 ESCA TCGA-KH-A6WC 13 0 Out-of-frame Inter-chr q25.1 32.33 26426 ChimerSeq STARFusion TCGA_RNA-Seq MBNL1-IGHJ4 MBNL1 chr3 151986632 + IGHJ4 chr14 106330467 - Exonic hg19 ESCA TCGA-KH-A6WC 13 0 Out-of-frame Inter-chr q25.1 26427 ChimerSeq STARFusion TCGA_RNA-Seq MBNL1-IGHM MBNL1 chr3 151986632 + IGHM chr14 106330467 - Exonic hg19 ESCA TCGA-KH-A6WC 13 0 Out-of-frame Inter-chr q25.1 q32.33 26428 ChimerSeq STARFusion TCGA_RNA-Seq SPRR3-KRT13 SPRR3 chr1 152976305 + KRT13 chr17 39657359 - Exonic hg19 ESCA TCGA-KH-A6WC 3 13 Out-of-frame Inter-chr q21.3 q21.2 Seq+ 26429 ChimerSeq STARFusion TCGA_RNA-Seq CCAT1-CASC8 CCAT1 chr8 128231055 - CASC8 chr8 128302305 - Exonic hg19 ESCA TCGA-IG-A4QS 581 337 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 26430 ChimerSeq STARFusion TCGA_RNA-Seq PRKCZ-IFLTD1 PRKCZ chr1 1991030 + IFLTD1 chr12 25702480 - Exonic hg19 ESCA TCGA-IG-A4QS 21 26 Out-of-frame Inter-chr p36.33 Tumor suppressor gene Seq+ 26431 ChimerSeq STARFusion TCGA_RNA-Seq PRKCZ-IFLTD1 PRKCZ chr1 1991030 + IFLTD1 chr12 25710303 - Exonic hg19 ESCA TCGA-IG-A4QS 15 26 CDS-5'UTR Inter-chr p36.33 Tumor suppressor gene Seq+ 26432 ChimerSeq STARFusion TCGA_RNA-Seq PRKCZ-IFLTD1 PRKCZ chr1 1991030 + IFLTD1 chr12 25679889 - Exonic hg19 ESCA TCGA-IG-A4QS 5 26 Out-of-frame Inter-chr p36.33 Tumor suppressor gene Seq+ 26433 ChimerSeq STARFusion TCGA_RNA-Seq NDUFAF6-RALYL NDUFAF6 chr8 95908155 + RALYL chr8 85441534 + Exonic hg19 ESCA TCGA-IG-A4QS 5 7 Out-of-frame Intra-chr q22.1 q21.2 Seq+ 26434 ChimerSeq STARFusion TCGA_RNA-Seq FOXO6-IGH@ FOXO6 chr1 41848543 + IGH@ chr14 106237746 - Exonic hg19 ESCA TCGA-IG-A4QT 41 0 Out-of-frame Inter-chr Tumor suppressor gene Transcription factor 32.33 26435 ChimerSeq STARFusion TCGA_RNA-Seq FOXO6-IGHG3 FOXO6 chr1 41848543 + IGHG3 chr14 106237746 - Exonic hg19 ESCA TCGA-IG-A4QT 41 0 Out-of-frame Inter-chr Tumor suppressor gene Transcription factor 26436 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106175005 - Exonic hg19 ESCA TCGA-IG-A4QT 39 0 Out-of-frame Inter-chr q21.2 32.33 26437 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHA1 GATAD1 chr7 92076851 + IGHA1 chr14 106175005 - Exonic hg19 ESCA TCGA-IG-A4QT 39 0 Out-of-frame Inter-chr q21.2 26438 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076852 + IGH@ chr14 106111129 - Exonic hg19 ESCA TCGA-IG-A4QT 37 0 Out-of-frame Inter-chr q21.2 32.33 26439 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG2 GATAD1 chr7 92076852 + IGHG2 chr14 106111129 - Exonic hg19 ESCA TCGA-IG-A4QT 37 0 Out-of-frame Inter-chr q21.2 26440 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106209411 - Exonic hg19 ESCA TCGA-IG-A4QT 33 0 Out-of-frame Inter-chr q21.2 32.33 26441 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG2 GATAD1 chr7 92076851 + IGHG2 chr14 106209411 - Exonic hg19 ESCA TCGA-IG-A4QT 33 0 Out-of-frame Inter-chr q21.2 26442 ChimerSeq STARFusion TCGA_RNA-Seq FOXO6-IGH@ FOXO6 chr1 41848543 + IGH@ chr14 106111130 - Exonic hg19 ESCA TCGA-IG-A4QT 27 0 Out-of-frame Inter-chr Tumor suppressor gene Transcription factor 32.33 26443 ChimerSeq STARFusion TCGA_RNA-Seq FAM131B-GIPC1 FAM131B chr7 143059853 - GIPC1 chr19 14603727 - Exonic hg19 ESCA TCGA-IC-A6RF 18 0 Out-of-frame Inter-chr q34 p13.12 26444 ChimerSeq STARFusion TCGA_RNA-Seq CSTB-SPRR3 CSTB chr21 45194062 - SPRR3 chr1 152975979 + Exonic hg19 ESCA TCGA-IC-A6RE 4 8 Out-of-frame Inter-chr q22.3 q21.3 26445 ChimerSeq STARFusion TCGA_RNA-Seq UCHL3-KLF5 UCHL3 chr13 76135017 + KLF5 chr13 73636247 + Exonic hg19 ESCA TCGA-V5-A7RB 75 15 In-Frame Intra-chr q22.2 q22.1 Tumor suppressor gene Transcription factor Seq+ 26446 ChimerSeq STARFusion TCGA_RNA-Seq MICALL2-CA3 MICALL2 chr7 1481828 - CA3 chr8 86354302 + Exonic hg19 ESCA TCGA-V5-A7RB 66 19 In-Frame Inter-chr p22.3 q21.2 Seq+ 26447 ChimerSeq STARFusion TCGA_RNA-Seq LRRFIP1-RAMP1 LRRFIP1 chr2 238668848 + RAMP1 chr2 238785866 + Exonic hg19 ESCA TCGA-V5-A7RB 38 19 In-Frame Intra-chr q37.3 q37.3 Seq+ 26448 ChimerSeq STARFusion TCGA_RNA-Seq CERS6-NOSTRIN CERS6 chr2 169404211 + NOSTRIN chr2 169699502 + Exonic hg19 ESCA TCGA-V5-A7RB 39 11 In-Frame Intra-chr q24.3 Seq+ 26449 ChimerSeq STARFusion TCGA_RNA-Seq LINC00662-SFMBT2 LINC00662 chr19 28283908 - SFMBT2 chr10 7327916 - Exonic hg19 ESCA TCGA-V5-A7RB 20 12 Out-of-frame Inter-chr q11 p14 26450 ChimerSeq STARFusion TCGA_RNA-Seq UCHL3-KLF5 UCHL3 chr13 76135017 + KLF5 chr13 73637962 + Exonic hg19 ESCA TCGA-V5-A7RB 15 15 Out-of-frame Intra-chr q22.2 q22.1 Tumor suppressor gene Transcription factor Seq+ 26451 ChimerSeq STARFusion TCGA_RNA-Seq ZNF800-GRM8 ZNF800 chr7 127031551 - GRM8 chr7 126883569 - Exonic hg19 ESCA TCGA-V5-A7RB 15 12 CDS-5'UTR Intra-chr q31.33 Transcription factor q31.33 Oncogene 26452 ChimerSeq STARFusion TCGA_RNA-Seq PIGZ-MFI2 PIGZ chr3 196695558 - MFI2 chr3 196736683 - Exonic hg19 ESCA TCGA-V5-A7RB 16 5 5'UTR-CDS Intra-chr q29 26453 ChimerSeq STARFusion TCGA_RNA-Seq FAM131B-GIPC1 FAM131B chr7 143059852 - GIPC1 chr19 14603726 - Exonic hg19 ESCA TCGA-V5-A7RB 17 0 Out-of-frame Inter-chr q34 p13.12 26454 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L3-NPY NFE2L3 chr7 26192688 + NPY chr7 24329118 + Exonic hg19 ESCA TCGA-V5-A7RB 12 18 Out-of-frame Intra-chr p15.2 Transcription factor p15.3 Seq+ 26455 ChimerSeq STARFusion TCGA_RNA-Seq NDUFA13-AZIN1 NDUFA13 chr19 19627141 + AZIN1 chr8 103852051 - Exonic hg19 ESCA TCGA-V5-A7RB 13 4 Out-of-frame Inter-chr p13.11 q22.3 Seq+ 26456 ChimerSeq STARFusion TCGA_RNA-Seq YJEFN3-AZIN1 YJEFN3 chr19 19627141 + AZIN1 chr8 103852051 - Exonic hg19 ESCA TCGA-V5-A7RB 13 4 5'UTR-CDS Inter-chr p13.11 q22.3 26457 ChimerSeq STARFusion TCGA_RNA-Seq AZIN1-NDUFA13 AZIN1 chr8 103848484 - NDUFA13 chr19 19636991 + Exonic hg19 ESCA TCGA-V5-A7RB 13 3 Out-of-frame Inter-chr q22.3 p13.11 Seq+ 26458 ChimerSeq STARFusion TCGA_RNA-Seq AZIN1-YJEFN3 AZIN1 chr8 103848484 - YJEFN3 chr19 19636991 + Exonic hg19 ESCA TCGA-V5-A7RB 13 3 CDS-5'UTR Inter-chr q22.3 p13.11 26459 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L3-NPY NFE2L3 chr7 26192688 + NPY chr7 24324860 + Exonic hg19 ESCA TCGA-V5-A7RB 12 6 CDS-5'UTR Intra-chr p15.2 Transcription factor p15.3 Seq+ 26460 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-RSBN1L PTPN12 chr7 77166962 + RSBN1L chr7 77365727 + Exonic hg19 ESCA TCGA-V5-A7RB 11 3 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 26461 ChimerSeq STARFusion TCGA_RNA-Seq ASAP1-FGF12 ASAP1 chr8 131370263 - FGF12 chr3 192078327 - Exonic hg19 ESCA TCGA-V5-A7RB 9 4 Out-of-frame Inter-chr q24.22 q29 Seq+ 26462 ChimerSeq STARFusion TCGA_RNA-Seq LARP4-LINC00935 LARP4 chr12 50794811 + LINC00935 chr12 49152992 + Exonic hg19 ESCA TCGA-V5-A7RB 6 7 Out-of-frame Intra-chr q13.12 26463 ChimerSeq STARFusion TCGA_RNA-Seq KLF12-LINC00393 KLF12 chr13 74708109 - LINC00393 chr13 74120978 - Exonic hg19 ESCA TCGA-V5-A7RC 45 9 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 26464 ChimerSeq STARFusion TCGA_RNA-Seq ECT2-FNDC3B ECT2 chr3 172504364 + FNDC3B chr3 172114954 + Exonic hg19 ESCA TCGA-V5-A7RC 16 2 Out-of-frame Intra-chr q26.31 Tumor suppressor gene q26.31 26465 ChimerSeq STARFusion TCGA_RNA-Seq PPP3R1-C1D PPP3R1 chr2 68479257 - C1D chr2 68274451 - Exonic hg19 ESCA TCGA-2H-A9GO 20 8 CDS-5'UTR Intra-chr p14 p14 Seq+ 26466 ChimerSeq STARFusion TCGA_RNA-Seq CLDN18-LYZ CLDN18 chr3 137750982 + LYZ chr12 69747549 + Exonic hg19 ESCA TCGA-2H-A9GO 8 10 Out-of-frame Inter-chr q22.3 q15 26467 ChimerSeq STARFusion TCGA_RNA-Seq GP2-LYZ GP2 chr16 20322540 - LYZ chr12 69747553 + Exonic hg19 ESCA TCGA-2H-A9GO 5 12 Out-of-frame Inter-chr p12.3 q15 Seq+ 26468 ChimerSeq STARFusion TCGA_RNA-Seq FAM213A-LYZ FAM213A chr10 82192114 + LYZ chr12 69747556 + Exonic hg19 ESCA TCGA-2H-A9GO 4 10 Out-of-frame Inter-chr q23.1 q15 26469 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-SHANK2 CTTN chr11 70256066 + SHANK2 chr11 70349036 - Exonic hg19 ESCA TCGA-VR-AA4G 25 2 In-Frame Intra-chr q13.3 q13.4 Seq+ 26470 ChimerSeq STARFusion TCGA_RNA-Seq OR5BJ1P-IGL@ OR5BJ1P chr12 48788670 - IGL@ chr22 23241803 + Exonic hg19 ESCA TCGA-VR-AA4G 13 0 Out-of-frame Inter-chr q11.22 26471 ChimerSeq STARFusion TCGA_RNA-Seq OR5BJ1P-IGLC2 OR5BJ1P chr12 48788670 - IGLC2 chr22 23241803 + Exonic hg19 ESCA TCGA-VR-AA4G 13 0 Out-of-frame Inter-chr q11.22 26472 ChimerSeq STARFusion TCGA_RNA-Seq OR5BJ1P-IGLJ2 OR5BJ1P chr12 48788670 - IGLJ2 chr22 23241803 + Exonic hg19 ESCA TCGA-VR-AA4G 13 0 Out-of-frame Inter-chr q11.22 26473 ChimerSeq STARFusion TCGA_RNA-Seq ANKS3-SEPT12 ANKS3 chr16 4774751 - SEPT12 chr16 4829787 - Exonic hg19 ESCA TCGA-S8-A6BW 19 4 In-Frame Intra-chr p13.3 p13.3 Seq+ 26474 ChimerSeq STARFusion TCGA_RNA-Seq RPL13P12-PNMA2 RPL13P12 chr17 17286669 - PNMA2 chr8 26364477 - Exonic hg19 ESCA TCGA-S8-A6BW 19 0 Out-of-frame Inter-chr p21.2 26475 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL2-TNFAIP2 RN7SL2 chr14 50329518 - TNFAIP2 chr14 103602903 + Exonic hg19 ESCA TCGA-S8-A6BW 16 1 Out-of-frame Intra-chr q21.3 q32.32 26476 ChimerSeq STARFusion TCGA_RNA-Seq REG1A-DDX52 REG1A chr2 79350526 + DDX52 chr17 35985986 - Exonic hg19 ESCA TCGA-S8-A6BV 17 0 Out-of-frame Inter-chr p12 q12 26477 ChimerSeq STARFusion TCGA_RNA-Seq MTND4P12-MIR4461 MTND4P12 chr5 134262745 - MIR4461 chr5 134263796 - Exonic hg19 ESCA TCGA-S8-A6BV 13 2 Out-of-frame Intra-chr q31.1 q31.1 26478 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142481912 + KLK5 chr19 51447042 - Exonic hg19 ESCA TCGA-S8-A6BV 10 0 3'UTR-CDS Inter-chr q13.41 26479 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142460418 + KLK5 chr19 51447042 - Exonic hg19 ESCA TCGA-S8-A6BV 10 0 In-Frame Inter-chr q13.41 26480 ChimerSeq STARFusion TCGA_RNA-Seq JMJD6-GLT8D1 JMJD6 chr17 74714815 - GLT8D1 chr3 52730056 - Exonic hg19 ESCA TCGA-S8-A6BV 8 2 Out-of-frame Inter-chr q25.1 p21.1 Seq+ 26481 ChimerSeq STARFusion TCGA_RNA-Seq ACLY-NEUROD2 ACLY chr17 40039375 - NEUROD2 chr17 37762857 - Exonic hg19 ESCA TCGA-VR-AA4D 67 102 CDS-5'UTR Intra-chr q21.2 q12 Transcription factor Seq+ 26482 ChimerSeq STARFusion TCGA_RNA-Seq ACLY-NEUROD2 ACLY chr17 40037072 - NEUROD2 chr17 37764217 - Exonic hg19 ESCA TCGA-VR-AA4D 52 101 Out-of-frame Intra-chr q21.2 q12 Transcription factor Seq+ 26483 ChimerSeq STARFusion TCGA_RNA-Seq TMEM99-CDK12 TMEM99 chr17 38975460 + CDK12 chr17 37707291 + Exonic hg19 ESCA TCGA-VR-AA4D 69 5 5'UTR-3'UTR Intra-chr q21.2 q12 Oncogene 26484 ChimerSeq STARFusion TCGA_RNA-Seq ACAA2-MYO5B ACAA2 chr18 47339839 - MYO5B chr18 47380017 - Exonic hg19 ESCA TCGA-VR-AA4D 12 1 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 26485 ChimerSeq STARFusion TCGA_RNA-Seq TMEM99-CDK12 TMEM99 chr17 38975422 + CDK12 chr17 37707291 + Exonic hg19 ESCA TCGA-VR-AA4D 11 5 5'UTR-3'UTR Intra-chr q21.2 q12 Oncogene 26486 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-RAB5C STARD3 chr17 37810003 + RAB5C chr17 40282608 - Exonic hg19 ESCA TCGA-M9-A5M8 60 19 Out-of-frame Intra-chr q12 q21.2 Seq+ 26487 ChimerSeq STARFusion TCGA_RNA-Seq FAM135A-LAMA2 FAM135A chr6 71162274 + LAMA2 chr6 129371063 + Exonic hg19 ESCA TCGA-M9-A5M8 31 11 In-Frame Intra-chr q13 q22.33 Seq+ 26488 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-MIEN1 GRB7 chr17 37894386 + MIEN1 chr17 37886544 - Exonic hg19 ESCA TCGA-M9-A5M8 20 2 5'UTR-CDS Intra-chr q12 q12 Seq+ 26489 ChimerSeq STARFusion TCGA_RNA-Seq ME2-SMAD4 ME2 chr18 48405678 + SMAD4 chr18 48604626 + Exonic hg19 ESCA TCGA-M9-A5M8 19 6 5'UTR-CDS Intra-chr q21.2 q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 26490 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-KRT10 ERBB2 chr17 37856564 + KRT10 chr17 38977369 - Exonic hg19 ESCA TCGA-M9-A5M8 19 5 Out-of-frame Intra-chr q12 Oncogene q21.2 Seq+ 26491 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-RAB5C STARD3 chr17 37793484 + RAB5C chr17 40282608 - Exonic hg19 ESCA TCGA-M9-A5M8 12 19 5'UTR-5'UTR Intra-chr q12 q21.2 Seq+ 26492 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-RAB5C STARD3 chr17 37810003 + RAB5C chr17 40289896 - Exonic hg19 ESCA TCGA-M9-A5M8 6 19 CDS-5'UTR Intra-chr q12 q21.2 Seq+ 26493 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-KRT10 ERBB2 chr17 37851434 + KRT10 chr17 38977369 - Exonic hg19 ESCA TCGA-M9-A5M8 9 5 5'UTR-CDS Intra-chr q12 Oncogene q21.2 Seq+ 26494 ChimerSeq STARFusion TCGA_RNA-Seq KIF22-PRKCB KIF22 chr16 29802150 + PRKCB chr16 24043457 + Exonic hg19 ESCA TCGA-R6-A6XG 34 49 Out-of-frame Intra-chr p11.2 p12.2 Tumor suppressor gene Seq+ 26495 ChimerSeq STARFusion TCGA_RNA-Seq FAM131B-GIPC1 FAM131B chr7 143059853 - GIPC1 chr19 14603727 - Exonic hg19 ESCA TCGA-R6-A6XG 12 0 Out-of-frame Inter-chr q34 p13.12 26496 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 ESCA TCGA-L5-A8NN 17 0 Out-of-frame Inter-chr q13.33 p21.1 26497 ChimerSeq STARFusion TCGA_RNA-Seq DTX4-FAM111B DTX4 chr11 58967246 + FAM111B chr11 58891652 + Exonic hg19 ESCA TCGA-L5-A8NS 15 4 In-Frame Intra-chr q12.1 q12.1 Seq+ 26498 ChimerSeq STARFusion TCGA_RNA-Seq FUT8-FNTB FUT8 chr14 65879932 + FNTB chr14 65479035 + Exonic hg19 ESCA TCGA-L5-A8NS 14 3 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 26499 ChimerSeq STARFusion TCGA_RNA-Seq MIDN-C19orf38 MIDN chr19 1255693 + C19orf38 chr19 10959117 + Exonic hg19 ESCA TCGA-L5-A8NS 13 4 CDS-5'UTR Intra-chr p13.3 p13.2 Seq+ 26500 ChimerSeq STARFusion TCGA_RNA-Seq ARAP1-IL12RB2 ARAP1 chr11 72404370 - IL12RB2 chr1 67816553 + Exonic hg19 ESCA TCGA-L5-A8NS 9 1 In-Frame Inter-chr q13.4 p31.3 Seq+ 26501 ChimerSeq STARFusion TCGA_RNA-Seq CHST12-EIF3B CHST12 chr7 2443280 + EIF3B chr7 2414163 + Exonic hg19 ESCA TCGA-L5-A8NS 8 1 5'UTR-CDS Intra-chr p22.3 p22.3 26502 ChimerSeq STARFusion TCGA_RNA-Seq MAN1C1-TTC40 MAN1C1 chr1 26075826 + TTC40 chr10 134686328 - Exonic hg19 ESCA TCGA-L5-A8NS 7 3 In-Frame Inter-chr p36.11 Seq+ 26503 ChimerSeq STARFusion TCGA_RNA-Seq AAMDC-TMEM135 AAMDC chr11 77532287 + TMEM135 chr11 87006824 + Exonic hg19 ESCA TCGA-L5-A8NS 4 7 Out-of-frame Intra-chr q14.1 q14.2 Seq+ 26504 ChimerSeq STARFusion TCGA_RNA-Seq BECN1-AP2B1 BECN1 chr17 40965966 - AP2B1 chr17 34036243 + Exonic hg19 ESCA TCGA-L5-A8NS 5 3 In-Frame Intra-chr q21.31 Tumor suppressor gene q12 Seq+ 26505 ChimerSeq STARFusion TCGA_RNA-Seq AAMDC-TMEM135 AAMDC chr11 77532226 + TMEM135 chr11 87006824 + Exonic hg19 ESCA TCGA-L5-A8NS 2 7 Out-of-frame Intra-chr q14.1 q14.2 Seq+ 26506 ChimerSeq STARFusion TCGA_RNA-Seq REEP3-RTKN2 REEP3 chr10 65359043 + RTKN2 chr10 64005816 - Exonic hg19 ESCA TCGA-L5-A8NR 8 6 Out-of-frame Intra-chr q21.3 q21.2 Seq+ 26507 ChimerSeq STARFusion TCGA_RNA-Seq SDF2-LYRM9 SDF2 chr17 26988744 - LYRM9 chr17 26209738 - Exonic hg19 ESCA TCGA-L5-A8NR 6 8 Out-of-frame Intra-chr q11.2 q11.2 26508 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-PPP1R1B MALAT1 chr11 65267145 + PPP1R1B chr17 37783255 + Exonic hg19 ESCA TCGA-L5-A8NR 4 14 Out-of-frame Inter-chr q13.1 q12 Tumor suppressor gene 26509 ChimerSeq STARFusion TCGA_RNA-Seq ORC2-RPLP2 ORC2 chr2 201790559 - RPLP2 chr11 809992 + Exonic hg19 ESCA TCGA-L5-A8NW 23 0 CDS-5'UTR Inter-chr q33.1 p15.5 Seq+ 26510 ChimerSeq STARFusion TCGA_RNA-Seq CDK8-ATP8A2 CDK8 chr13 26928017 + ATP8A2 chr13 26402256 + Exonic hg19 ESCA TCGA-L5-A8NW 12 4 In-Frame Intra-chr q12.13 CMGC:CDK Oncogene q12.13 Seq+ 26511 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-CEACAM5 LYZ chr12 69747266 + CEACAM5 chr19 42233378 + Exonic hg19 ESCA TCGA-L5-A8NW 7 9 Out-of-frame Inter-chr q15 q13.2 26512 ChimerSeq STARFusion TCGA_RNA-Seq TMC5-GPRC5B TMC5 chr16 19508485 + GPRC5B chr16 19883272 - Exonic hg19 ESCA TCGA-L5-A8NU 28 2 Out-of-frame Intra-chr p12.3 p12.3 Seq+ 26513 ChimerSeq STARFusion TCGA_RNA-Seq NRP2-KLF7 NRP2 chr2 206631527 + KLF7 chr2 207953305 - Exonic hg19 ESCA TCGA-L5-A8NT 190 127 In-Frame Intra-chr q33.3 q33.3 Transcription factor Seq+ 26514 ChimerSeq STARFusion TCGA_RNA-Seq NRP2-KLF7 NRP2 chr2 206631542 + KLF7 chr2 207953305 - Exonic hg19 ESCA TCGA-L5-A8NT 24 126 In-Frame Intra-chr q33.3 q33.3 Transcription factor Seq+ 26515 ChimerSeq STARFusion TCGA_RNA-Seq RBM33-TMEM120A RBM33 chr7 155437613 + TMEM120A chr7 75618542 - Exonic hg19 ESCA TCGA-L5-A8NG 103 41 Out-of-frame Intra-chr q36.3 q11.23 Seq+ 26516 ChimerSeq STARFusion TCGA_RNA-Seq MBTD1-THRA MBTD1 chr17 49336504 - THRA chr17 38240088 + Exonic hg19 ESCA TCGA-L5-A8NG 58 20 5'UTR-CDS Intra-chr q21.33 q21.1 Tumor suppressor gene Transcription factor Seq+ 26517 ChimerSeq STARFusion TCGA_RNA-Seq MED24-NR1D1 MED24 chr17 38178208 - NR1D1 chr17 38253656 - Exonic hg19 ESCA TCGA-L5-A8NG 38 7 In-Frame Intra-chr q21.1 q21.1 Transcription factor Seq+ 26518 ChimerSeq STARFusion TCGA_RNA-Seq ECSIT-RGL3 ECSIT chr19 11623871 - RGL3 chr19 11508273 - Exonic hg19 ESCA TCGA-L5-A8NG 23 10 In-Frame Intra-chr p13.2 p13.2 Seq+ 26519 ChimerSeq STARFusion TCGA_RNA-Seq FBL-ZNF829 FBL chr19 40327196 - ZNF829 chr19 37406153 - Exonic hg19 ESCA TCGA-L5-A8NG 12 7 In-Frame Intra-chr q13.12 Transcription factor Seq+ 26520 ChimerSeq STARFusion TCGA_RNA-Seq RBM39-C22orf24 RBM39 chr20 34326890 - C22orf24 chr22 32334101 - Exonic hg19 ESCA TCGA-L5-A8NF 337 131 CDS-5'UTR Inter-chr q11.22 q12.3 Seq+ 26521 ChimerSeq STARFusion TCGA_RNA-Seq TMBIM4-LYZ TMBIM4 chr12 66531471 - LYZ chr12 69747549 + Exonic hg19 ESCA TCGA-L5-A8NF 45 26 Out-of-frame Intra-chr q14.3 q15 26522 ChimerSeq STARFusion TCGA_RNA-Seq CLDN18-LYZ CLDN18 chr3 137750982 + LYZ chr12 69747549 + Exonic hg19 ESCA TCGA-L5-A8NF 37 33 Out-of-frame Inter-chr q22.3 q15 26523 ChimerSeq STARFusion TCGA_RNA-Seq BAIAP2L1-ANKIB1 BAIAP2L1 chr7 97933508 - ANKIB1 chr7 91924203 + Exonic hg19 ESCA TCGA-L5-A8NF 35 19 CDS-5'UTR Intra-chr q22.1 q21.2 Seq+ 26524 ChimerSeq STARFusion TCGA_RNA-Seq FCGBP-SPTAN1 FCGBP chr19 40408824 - SPTAN1 chr9 131314900 + Exonic hg19 ESCA TCGA-L5-A8NF 23 0 Out-of-frame Inter-chr q34.11 26525 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D15-PTPRR TBC1D15 chr12 72266783 + PTPRR chr12 71286757 - Exonic hg19 ESCA TCGA-L5-A8NF 20 10 Out-of-frame Intra-chr q21.1 q15 Seq+ 26526 ChimerSeq STARFusion TCGA_RNA-Seq CORO2A-NCBP1 CORO2A chr9 100884935 - NCBP1 chr9 100403076 + Exonic hg19 ESCA TCGA-L5-A8NF 15 8 3'UTR-CDS Intra-chr q22.33 q22.33 Seq+ 26527 ChimerSeq STARFusion TCGA_RNA-Seq PPP3CB-USP54 PPP3CB chr10 75204483 - USP54 chr10 75265184 - Exonic hg19 ESCA TCGA-L5-A8NF 12 3 In-Frame Intra-chr q22.2 q22.2 Seq+ 26528 ChimerSeq STARFusion TCGA_RNA-Seq RANGAP1-POLR3H RANGAP1 chr22 41680905 - POLR3H chr22 41929691 - Exonic hg19 ESCA TCGA-L5-A8NF 8 11 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 26529 ChimerSeq STARFusion TCGA_RNA-Seq TGOLN2-LYZ TGOLN2 chr2 85546604 - LYZ chr12 69747559 + Exonic hg19 ESCA TCGA-L5-A8NF 8 9 Out-of-frame Inter-chr p11.2 q15 26530 ChimerSeq STARFusion TCGA_RNA-Seq PUS7L-CPSF6 PUS7L chr12 44152533 - CPSF6 chr12 69646831 + Exonic hg19 ESCA TCGA-L5-A8NF 8 4 5'UTR-CDS Intra-chr q12 q15 Seq+ 26531 ChimerSeq STARFusion TCGA_RNA-Seq RANGAP1-POLR3H RANGAP1 chr22 41680905 - POLR3H chr22 41928749 - Exonic hg19 ESCA TCGA-L5-A8NF 5 11 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 26532 ChimerSeq STARFusion TCGA_RNA-Seq ITGA7-MSRB3 ITGA7 chr12 56109703 - MSRB3 chr12 65720606 + Exonic hg19 ESCA TCGA-L5-A8NF 5 7 5'UTR-CDS Intra-chr q13.2 Tumor suppressor gene q14.3 Seq+ 26533 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D15-PTPRR TBC1D15 chr12 72266783 + PTPRR chr12 71314347 - Exonic hg19 ESCA TCGA-L5-A8NF 3 10 5'UTR-5'UTR Intra-chr q21.1 q15 Seq+ 26534 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V0E1-ERGIC1 ATP6V0E1 chr5 172410967 + ERGIC1 chr5 172315702 + Exonic hg19 ESCA TCGA-L5-A8NE 144 20 In-Frame Intra-chr q35.1 q35.1 Seq+ 26535 ChimerSeq STARFusion TCGA_RNA-Seq DVL1-CCNL2 DVL1 chr1 1271000 - CCNL2 chr1 1323890 - Exonic hg19 ESCA TCGA-L5-A8NE 129 64 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 26536 ChimerSeq STARFusion TCGA_RNA-Seq CEP170B-AUNIP CEP170B chr14 105331850 + AUNIP chr1 26164045 - Exonic hg19 ESCA TCGA-L5-A8NE 84 24 Out-of-frame Inter-chr q32.33 p36.11 Seq+ 26537 ChimerSeq STARFusion TCGA_RNA-Seq MIR4519-PKIG MIR4519 chr16 30887439 + PKIG chr20 43218438 + Exonic hg19 ESCA TCGA-L5-A8NE 65 19 5'UTR-5'UTR Inter-chr p11.2 q13.12 26538 ChimerSeq STARFusion TCGA_RNA-Seq FA2H-KARS FA2H chr16 74773921 - KARS chr16 75665753 - Exonic hg19 ESCA TCGA-L5-A8NE 60 13 In-Frame Intra-chr q23.1 q23.1 Seq+ 26539 ChimerSeq STARFusion TCGA_RNA-Seq GP2-LYZ GP2 chr16 20322540 - LYZ chr12 69747553 + Exonic hg19 ESCA TCGA-L5-A8NE 49 38 Out-of-frame Inter-chr p12.3 q15 Seq+ 26540 ChimerSeq STARFusion TCGA_RNA-Seq SPSB3-ECI1 SPSB3 chr16 1832503 - ECI1 chr16 2293225 - Exonic hg19 ESCA TCGA-L5-A8NE 55 11 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 26541 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPL-OVOL3 HNRNPL chr19 39342936 - OVOL3 chr19 36602031 + Exonic hg19 ESCA TCGA-L5-A8NE 56 1 Out-of-frame Intra-chr q13.12 Transcription factor 26542 ChimerSeq STARFusion TCGA_RNA-Seq DVL1-CCNL2 DVL1 chr1 1271000 - CCNL2 chr1 1323445 - Exonic hg19 ESCA TCGA-L5-A8NE 36 64 3'UTR-CDS Intra-chr p36.33 p36.33 Seq+ 26543 ChimerSeq STARFusion TCGA_RNA-Seq CCT4-BIRC6 CCT4 chr2 62107421 - BIRC6 chr2 32756422 + Exonic hg19 ESCA TCGA-L5-A8NE 45 20 In-Frame Intra-chr p15 p22.3 Seq+ 26544 ChimerSeq STARFusion TCGA_RNA-Seq POLR3H-FAM87B POLR3H chr22 41936703 - FAM87B chr1 754103 + Exonic hg19 ESCA TCGA-L5-A8NE 45 7 Out-of-frame Inter-chr q13.2 p36.33 Seq+ 26545 ChimerSeq STARFusion TCGA_RNA-Seq TIA1-SNRPG TIA1 chr2 70443340 - SNRPG chr2 70508816 - Exonic hg19 ESCA TCGA-L5-A8NE 37 12 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 26546 ChimerSeq STARFusion TCGA_RNA-Seq PSMG2-OSBPL1A PSMG2 chr18 12703163 + OSBPL1A chr18 21914294 - Exonic hg19 ESCA TCGA-L5-A8NE 35 10 Out-of-frame Intra-chr p11.21 q11.2 Seq+ 26547 ChimerSeq STARFusion TCGA_RNA-Seq ROCK1-CIDEA ROCK1 chr18 18691436 - CIDEA chr18 12262824 + Exonic hg19 ESCA TCGA-L5-A8NE 35 5 5'UTR-5'UTR Intra-chr q11.1 AGC:DMPK p11.21 Seq+ 26548 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC3-CDCP1 ZDHHC3 chr3 44959402 - CDCP1 chr3 45130633 - Exonic hg19 ESCA TCGA-L5-A8NE 30 10 3'UTR-CDS Intra-chr p21.31 Tumor suppressor gene Seq+ 26549 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-XRRA1 PPFIA1 chr11 70118542 + XRRA1 chr11 74559507 - Exonic hg19 ESCA TCGA-L5-A8NE 29 11 In-Frame Intra-chr q13.3 q13.4 Seq+ 26550 ChimerSeq STARFusion TCGA_RNA-Seq IP6K1-UBA7 IP6K1 chr3 49823787 - UBA7 chr3 49847616 - Exonic hg19 ESCA TCGA-L5-A8NE 27 10 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 26551 ChimerSeq STARFusion TCGA_RNA-Seq FAM83G-B9D1 FAM83G chr17 18891560 - B9D1 chr17 19261264 - Exonic hg19 ESCA TCGA-L5-A8NE 27 7 In-Frame Intra-chr p11.2 p11.2 Seq+ 26552 ChimerSeq STARFusion TCGA_RNA-Seq AK4-NDC1 AK4 chr1 65656512 + NDC1 chr1 54293846 - Exonic hg19 ESCA TCGA-L5-A8NE 25 13 Out-of-frame Intra-chr p31.3 p32.3 Seq+ 26553 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA7-USH1C PLEKHA7 chr11 17035536 - USH1C chr11 17523527 - Exonic hg19 ESCA TCGA-L5-A8NE 25 12 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 26554 ChimerSeq STARFusion TCGA_RNA-Seq KIF23-PAQR5 KIF23 chr15 69709850 + PAQR5 chr15 69695920 + Exonic hg19 ESCA TCGA-L5-A8NE 26 6 Out-of-frame Intra-chr q23 q23 Seq+ 26555 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA7-KHDC3L PLEKHA7 chr11 17035536 - KHDC3L chr6 74072440 + Exonic hg19 ESCA TCGA-L5-A8NE 24 7 Out-of-frame Inter-chr p15.1 q13 Seq+ 26556 ChimerSeq STARFusion TCGA_RNA-Seq FBXW5-ENTPD2 FBXW5 chr9 139835795 - ENTPD2 chr9 139946800 - Exonic hg19 ESCA TCGA-L5-A8NE 23 6 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 26557 ChimerSeq STARFusion TCGA_RNA-Seq TGOLN2-LYZ TGOLN2 chr2 85546604 - LYZ chr12 69747559 + Exonic hg19 ESCA TCGA-L5-A8NE 19 21 Out-of-frame Inter-chr p11.2 q15 26558 ChimerSeq STARFusion TCGA_RNA-Seq PPAP2C-CDC34 PPAP2C chr19 281358 - CDC34 chr19 535837 + Exonic hg19 ESCA TCGA-L5-A8NE 22 3 3'UTR-CDS Intra-chr p13.3 26559 ChimerSeq STARFusion TCGA_RNA-Seq GP2-LYZ GP2 chr16 20322482 - LYZ chr12 69747554 + Exonic hg19 ESCA TCGA-L5-A8NE 12 35 Out-of-frame Inter-chr p12.3 q15 Seq+ 26560 ChimerSeq STARFusion TCGA_RNA-Seq SPSB3-ECI1 SPSB3 chr16 1832194 - ECI1 chr16 2293424 - Exonic hg19 ESCA TCGA-L5-A8NE 18 11 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 26561 ChimerSeq STARFusion TCGA_RNA-Seq TGOLN2-LYZ TGOLN2 chr2 85546612 - LYZ chr12 69747556 + Exonic hg19 ESCA TCGA-L5-A8NE 15 19 Out-of-frame Inter-chr p11.2 q15 26562 ChimerSeq STARFusion TCGA_RNA-Seq CWC25-C17orf98 CWC25 chr17 36981419 - C17orf98 chr17 36993493 - Exonic hg19 ESCA TCGA-L5-A8NE 16 10 In-Frame Intra-chr q12 q12 Seq+ 26563 ChimerSeq STARFusion TCGA_RNA-Seq KHDC1-SLC17A5 KHDC1 chr6 74001721 - SLC17A5 chr6 74325170 - Exonic hg19 ESCA TCGA-L5-A8NE 15 8 Out-of-frame Intra-chr q13 q13 Seq+ 26564 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-GP2 LYZ chr12 69747265 + GP2 chr16 20322124 - Exonic hg19 ESCA TCGA-L5-A8NE 11 24 Out-of-frame Inter-chr q15 p12.3 26565 ChimerSeq STARFusion TCGA_RNA-Seq GP2-LYZ GP2 chr16 20322470 - LYZ chr12 69747553 + Exonic hg19 ESCA TCGA-L5-A8NE 8 35 Out-of-frame Inter-chr p12.3 q15 Seq+ 26566 ChimerSeq STARFusion TCGA_RNA-Seq MIR4519-PKIG MIR4519 chr16 30887439 + PKIG chr20 43211226 + Exonic hg19 ESCA TCGA-L5-A8NE 12 19 5'UTR-5'UTR Inter-chr p11.2 q13.12 26567 ChimerSeq STARFusion TCGA_RNA-Seq DTNB-ASXL2 DTNB chr2 25818955 - ASXL2 chr2 25991737 - Exonic hg19 ESCA TCGA-L5-A8NE 15 5 In-Frame Intra-chr p23.3 p23.3 Seq+ 26568 ChimerSeq STARFusion TCGA_RNA-Seq TNRC18-ACTB TNRC18 chr7 5460691 - ACTB chr7 5569294 - Exonic hg19 ESCA TCGA-L5-A8NE 13 11 CDS-3'UTR Intra-chr p22.1 p22.1 Seq+ 26569 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-RBM3 LYZ chr12 69747265 + RBM3 chrX 48436441 + Exonic hg19 ESCA TCGA-L5-A8NE 11 17 Out-of-frame Inter-chr q15 p11.23 26570 ChimerSeq STARFusion TCGA_RNA-Seq RICTOR-C9 RICTOR chr5 39074213 - C9 chr5 39342298 - Exonic hg19 ESCA TCGA-L5-A8NE 13 9 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 26571 ChimerSeq STARFusion TCGA_RNA-Seq GP2-LYZ GP2 chr16 20322383 - LYZ chr12 69747553 + Exonic hg19 ESCA TCGA-L5-A8NE 6 35 Out-of-frame Inter-chr p12.3 q15 Seq+ 26572 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-RBM3 LYZ chr12 69747259 + RBM3 chrX 48436435 + Exonic hg19 ESCA TCGA-L5-A8NE 10 17 Out-of-frame Inter-chr q15 p11.23 26573 ChimerSeq STARFusion TCGA_RNA-Seq GNAI2-SLC38A3 GNAI2 chr3 50273885 + SLC38A3 chr3 50251582 + Exonic hg19 ESCA TCGA-L5-A8NE 11 7 CDS-5'UTR Intra-chr p21.31 p21.31 Seq+ 26574 ChimerSeq STARFusion TCGA_RNA-Seq CWC25-C17orf98 CWC25 chr17 36981419 - C17orf98 chr17 36991599 - Exonic hg19 ESCA TCGA-L5-A8NE 10 10 Out-of-frame Intra-chr q12 q12 Seq+ 26575 ChimerSeq STARFusion TCGA_RNA-Seq IP6K1-UBA7 IP6K1 chr3 49823787 - UBA7 chr3 49847312 - Exonic hg19 ESCA TCGA-L5-A8NE 10 10 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 26576 ChimerSeq STARFusion TCGA_RNA-Seq PFDN1-HBEGF PFDN1 chr5 139680001 - HBEGF chr5 139715612 - Exonic hg19 ESCA TCGA-L5-A8NE 12 2 In-Frame Intra-chr q31.3 q31.3 26577 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-GP2 LYZ chr12 69747292 + GP2 chr16 20322127 - Exonic hg19 ESCA TCGA-L5-A8NE 6 24 Out-of-frame Inter-chr q15 p12.3 26578 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-GP2 LYZ chr12 69747259 + GP2 chr16 20322130 - Exonic hg19 ESCA TCGA-L5-A8NE 6 24 Out-of-frame Inter-chr q15 p12.3 26579 ChimerSeq STARFusion TCGA_RNA-Seq PDLIM2-SORBS3 PDLIM2 chr8 22449181 + SORBS3 chr8 22411965 + Exonic hg19 ESCA TCGA-L5-A8NE 10 6 CDS-5'UTR Intra-chr p21.3 p21.3 Seq+ 26580 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-CYB561 LYZ chr12 69747115 + CYB561 chr17 61510507 - Exonic hg19 ESCA TCGA-L5-A8NE 6 21 Out-of-frame Inter-chr q15 q23.3 26581 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-CYB561 LYZ chr12 69747122 + CYB561 chr17 61510500 - Exonic hg19 ESCA TCGA-L5-A8NE 6 21 Out-of-frame Inter-chr q15 q23.3 26582 ChimerSeq STARFusion TCGA_RNA-Seq COL26A1-GTF2IRD1 COL26A1 chr7 101091068 + GTF2IRD1 chr7 73944064 + Exonic hg19 ESCA TCGA-L5-A8NE 9 5 Out-of-frame Intra-chr q22.1 q11.23 Transcription factor 26583 ChimerSeq STARFusion TCGA_RNA-Seq SPSB3-ECI1 SPSB3 chr16 1832503 - ECI1 chr16 2293369 - Exonic hg19 ESCA TCGA-L5-A8NE 7 11 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 26584 ChimerSeq STARFusion TCGA_RNA-Seq PDLIM2-SORBS3 PDLIM2 chr8 22451345 + SORBS3 chr8 22411965 + Exonic hg19 ESCA TCGA-L5-A8NE 8 6 CDS-5'UTR Intra-chr p21.3 p21.3 Seq+ 26585 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-GP2 LYZ chr12 69747384 + GP2 chr16 20322212 - Exonic hg19 ESCA TCGA-L5-A8NE 3 24 Out-of-frame Inter-chr q15 p12.3 26586 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-XRRA1 PPFIA1 chr11 70118542 + XRRA1 chr11 74556316 - Exonic hg19 ESCA TCGA-L5-A8NE 6 10 In-Frame Intra-chr q13.3 q13.4 Seq+ 26587 ChimerSeq STARFusion TCGA_RNA-Seq AK4-NDC1 AK4 chr1 65656512 + NDC1 chr1 54291609 - Exonic hg19 ESCA TCGA-L5-A8NE 5 13 Out-of-frame Intra-chr p31.3 p32.3 Seq+ 26588 ChimerSeq STARFusion TCGA_RNA-Seq TNRC18-ACTB TNRC18 chr7 5463072 - ACTB chr7 5569294 - Exonic hg19 ESCA TCGA-L5-A8NE 5 11 5'UTR-3'UTR Intra-chr p22.1 p22.1 Seq+ 26589 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-XRRA1 PPFIA1 chr11 70118542 + XRRA1 chr11 74563127 - Exonic hg19 ESCA TCGA-L5-A8NE 4 10 In-Frame Intra-chr q13.3 q13.4 Seq+ 26590 ChimerSeq STARFusion TCGA_RNA-Seq LAMA3-APOBEC1 LAMA3 chr18 21519350 + APOBEC1 chr12 7805431 - Exonic hg19 ESCA TCGA-L5-A8NJ 70 7 In-Frame Inter-chr q11.2 p13.31 Seq+ 26591 ChimerSeq STARFusion TCGA_RNA-Seq SENP5-PAK2 SENP5 chr3 196594944 + PAK2 chr3 196554067 + Exonic hg19 ESCA TCGA-L5-A8NJ 27 0 5'UTR-CDS Intra-chr q29 q29 STE:STE20 Seq+ 26592 ChimerSeq STARFusion TCGA_RNA-Seq PGAP3-ERBB2 PGAP3 chr17 37840850 - ERBB2 chr17 37849514 + Exonic hg19 ESCA TCGA-L5-A8NJ 15 6 CDS-5'UTR Intra-chr q12 Oncogene q12 Oncogene Seq+ 26593 ChimerSeq STARFusion TCGA_RNA-Seq PGAP3-ERBB2 PGAP3 chr17 37840850 - ERBB2 chr17 37844949 + Exonic hg19 ESCA TCGA-L5-A8NJ 5 6 CDS-5'UTR Intra-chr q12 Oncogene q12 Oncogene Seq+ 26594 ChimerSeq STARFusion TCGA_RNA-Seq PAPL-ACTN4 PAPL chr19 39576030 + ACTN4 chr19 39195574 + Exonic hg19 ESCA TCGA-L5-A8NI 294 77 In-Frame Intra-chr Seq+ 26595 ChimerSeq STARFusion TCGA_RNA-Seq MSH2-EPCAM MSH2 chr2 47630541 + EPCAM chr2 47612305 + Exonic hg19 ESCA TCGA-L5-A8NI 240 54 Out-of-frame Intra-chr p21 Oncogene Tumor suppressor gene p21 Seq+ 26596 ChimerSeq STARFusion TCGA_RNA-Seq IST1-DHX38 IST1 chr16 71929492 + DHX38 chr16 72130038 + Exonic hg19 ESCA TCGA-L5-A8NI 125 32 5'UTR-5'UTR Intra-chr q22.2 q22.2 Seq+ 26597 ChimerSeq STARFusion TCGA_RNA-Seq FAM102A-C11orf30 FAM102A chr9 130742271 - C11orf30 chr11 76255303 + Exonic hg19 ESCA TCGA-L5-A8NI 70 25 Out-of-frame Inter-chr q34.11 Seq+ 26598 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-FANCA ANKRD11 chr16 89556653 - FANCA chr16 89818630 - Exonic hg19 ESCA TCGA-L5-A8NI 69 20 5'UTR-CDS Intra-chr q24.3 q24.3 Oncogene Seq+ 26599 ChimerSeq STARFusion TCGA_RNA-Seq KDM5A-NINJ2 KDM5A chr12 430161 - NINJ2 chr12 675344 - Exonic hg19 ESCA TCGA-L5-A8NI 69 10 In-Frame Intra-chr p13.33 Tumor suppressor gene p13.33 Seq+ 26600 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-C5orf42 NIPBL chr5 36962376 + C5orf42 chr5 37115151 - Exonic hg19 ESCA TCGA-L5-A8NI 49 12 In-Frame Intra-chr p13.2 p13.2 Seq+ 26601 ChimerSeq STARFusion TCGA_RNA-Seq GOLPH3-IKZF3 GOLPH3 chr5 32173916 - IKZF3 chr17 37944627 - Exonic hg19 ESCA TCGA-L5-A8NI 44 22 Out-of-frame Inter-chr p13.3 q21.1 Tumor suppressor gene Transcription factor Seq+ 26602 ChimerSeq STARFusion TCGA_RNA-Seq CUX1-COL26A1 CUX1 chr7 101559505 + COL26A1 chr7 101176363 + Exonic hg19 ESCA TCGA-L5-A8NI 47 5 Out-of-frame Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 26603 ChimerSeq STARFusion TCGA_RNA-Seq WNK2-SUSD3 WNK2 chr9 96031028 + SUSD3 chr9 95838066 + Exonic hg19 ESCA TCGA-L5-A8NI 43 16 In-Frame Intra-chr q22.31 Tumor suppressor gene q22.31 Seq+ 26604 ChimerSeq STARFusion TCGA_RNA-Seq ZNF292-C6orf165 ZNF292 chr6 87865477 + C6orf165 chr6 88210226 + Exonic hg19 ESCA TCGA-L5-A8NI 43 9 CDS-3'UTR Intra-chr q14.3 Tumor suppressor gene Transcription factor 26605 ChimerSeq STARFusion TCGA_RNA-Seq ZNF292-SLC35A1 ZNF292 chr6 87865477 + SLC35A1 chr6 88210226 + Exonic hg19 ESCA TCGA-L5-A8NI 43 9 Out-of-frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q15 Seq+ 26606 ChimerSeq STARFusion TCGA_RNA-Seq KMT2C-SND1 KMT2C chr7 152132711 - SND1 chr7 127447538 + Exonic hg19 ESCA TCGA-L5-A8NI 42 8 Out-of-frame Intra-chr q36.1 Oncogene Tumor suppressor gene q32.1 Seq+ 26607 ChimerSeq STARFusion TCGA_RNA-Seq ZNF292-C6orf165 ZNF292 chr6 87865477 + C6orf165 chr6 88210876 + Exonic hg19 ESCA TCGA-L5-A8NI 41 9 CDS-3'UTR Intra-chr q14.3 Tumor suppressor gene Transcription factor 26608 ChimerSeq STARFusion TCGA_RNA-Seq ZNF292-SLC35A1 ZNF292 chr6 87865477 + SLC35A1 chr6 88210876 + Exonic hg19 ESCA TCGA-L5-A8NI 41 9 In-Frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q15 Seq+ 26609 ChimerSeq STARFusion TCGA_RNA-Seq RBM47-APBB2 RBM47 chr4 40631413 - APBB2 chr4 40832594 - Exonic hg19 ESCA TCGA-L5-A8NI 38 15 5'UTR-5'UTR Intra-chr p14 p13 Seq+ 26610 ChimerSeq STARFusion TCGA_RNA-Seq KMT2E-LHFPL3 KMT2E chr7 104681470 + LHFPL3 chr7 104546634 + Exonic hg19 ESCA TCGA-L5-A8NI 38 12 Out-of-frame Intra-chr q22.3 q22.2 26611 ChimerSeq STARFusion TCGA_RNA-Seq UNK-KIAA0195 UNK chr17 73781065 + KIAA0195 chr17 73467881 + Exonic hg19 ESCA TCGA-L5-A8NI 38 6 5'UTR-5'UTR Intra-chr q25.1 Seq+ 26612 ChimerSeq STARFusion TCGA_RNA-Seq DDB1-CPSF7 DDB1 chr11 61080971 - CPSF7 chr11 61183991 - Exonic hg19 ESCA TCGA-L5-A8NI 35 11 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 26613 ChimerSeq STARFusion TCGA_RNA-Seq RELB-ZNF227 RELB chr19 45532250 + ZNF227 chr19 44738855 + Exonic hg19 ESCA TCGA-L5-A8NI 31 3 Out-of-frame Intra-chr q13.32 Transcription factor q13.31 Transcription factor Seq+ 26614 ChimerSeq STARFusion TCGA_RNA-Seq TRIM14-CORO2A TRIM14 chr9 100881264 - CORO2A chr9 100899970 - Exonic hg19 ESCA TCGA-L5-A8NI 28 5 In-Frame Intra-chr q22.33 q22.33 Seq+ 26615 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-CDC25A MAP4 chr3 48130263 - CDC25A chr3 48215947 - Exonic hg19 ESCA TCGA-L5-A8NI 26 10 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 26616 ChimerSeq STARFusion TCGA_RNA-Seq NISCH-DNAH1 NISCH chr3 52492860 + DNAH1 chr3 52413921 + Exonic hg19 ESCA TCGA-L5-A8NI 24 7 In-Frame Intra-chr p21.1 p21.1 Seq+ 26617 ChimerSeq STARFusion TCGA_RNA-Seq ETHE1-PLAUR ETHE1 chr19 44030667 - PLAUR chr19 44159725 - Exonic hg19 ESCA TCGA-L5-A8NI 22 10 In-Frame Intra-chr q13.31 q13.31 Seq+ 26618 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R2A-MATR3 PPP2R2A chr8 26151256 + MATR3 chr5 138650364 + Exonic hg19 ESCA TCGA-L5-A8NI 23 3 Out-of-frame Inter-chr p21.2 q31.2 Seq+ 26619 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-FANCA ANKRD11 chr16 89556653 - FANCA chr16 89825113 - Exonic hg19 ESCA TCGA-L5-A8NI 16 20 5'UTR-CDS Intra-chr q24.3 q24.3 Oncogene Seq+ 26620 ChimerSeq STARFusion TCGA_RNA-Seq GOLPH3-IKZF3 GOLPH3 chr5 32173916 - IKZF3 chr17 37934020 - Exonic hg19 ESCA TCGA-L5-A8NI 15 22 Out-of-frame Inter-chr p13.3 q21.1 Tumor suppressor gene Transcription factor Seq+ 26621 ChimerSeq STARFusion TCGA_RNA-Seq USF2-ZNF30 USF2 chr19 35760906 + ZNF30 chr19 35433498 + Exonic hg19 ESCA TCGA-L5-A8NI 18 8 CDS-5'UTR Intra-chr q13.12 Transcription factor q13.11 Transcription factor Seq+ 26622 ChimerSeq STARFusion TCGA_RNA-Seq USF2-ZNF30 USF2 chr19 35760602 + ZNF30 chr19 35433498 + Exonic hg19 ESCA TCGA-L5-A8NI 18 8 CDS-5'UTR Intra-chr q13.12 Transcription factor q13.11 Transcription factor Seq+ 26623 ChimerSeq STARFusion TCGA_RNA-Seq RBM47-APBB2 RBM47 chr4 40632480 - APBB2 chr4 40832594 - Exonic hg19 ESCA TCGA-L5-A8NI 16 15 5'UTR-5'UTR Intra-chr p14 p13 Seq+ 26624 ChimerSeq STARFusion TCGA_RNA-Seq THRAP3-ARHGEF10L THRAP3 chr1 36690106 + ARHGEF10L chr1 17907048 + Exonic hg19 ESCA TCGA-L5-A8NI 17 6 5'UTR-5'UTR Intra-chr p34.3 p36.13 Seq+ 26625 ChimerSeq STARFusion TCGA_RNA-Seq GOLPH3-IKZF3 GOLPH3 chr5 32173916 - IKZF3 chr17 37922746 - Exonic hg19 ESCA TCGA-L5-A8NI 12 22 Out-of-frame Inter-chr p13.3 q21.1 Tumor suppressor gene Transcription factor Seq+ 26626 ChimerSeq STARFusion TCGA_RNA-Seq SHROOM3-LUC7L SHROOM3 chr4 77507622 + LUC7L chr16 258187 - Exonic hg19 ESCA TCGA-L5-A8NI 14 6 Out-of-frame Inter-chr q21.1 p13.3 Seq+ 26627 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1671-CNIH3 KIAA1671 chr22 25445331 + CNIH3 chr1 224868660 + Exonic hg19 ESCA TCGA-L5-A8NI 13 6 In-Frame Inter-chr q11.23 q42.12 Seq+ 26628 ChimerSeq STARFusion TCGA_RNA-Seq CCM2-SLC38A10 CCM2 chr7 45039962 + SLC38A10 chr17 79227040 - Exonic hg19 ESCA TCGA-L5-A8NI 12 6 Out-of-frame Inter-chr p13 q25.3 26629 ChimerSeq STARFusion TCGA_RNA-Seq SMG5-CCT3 SMG5 chr1 156230242 - CCT3 chr1 156290816 - Exonic hg19 ESCA TCGA-L5-A8NI 12 2 Out-of-frame Intra-chr q22 q22 Seq+ 26630 ChimerSeq STARFusion TCGA_RNA-Seq ERC1-WNK1 ERC1 chr12 1213990 + WNK1 chr12 977032 + Exonic hg19 ESCA TCGA-L5-A8NI 9 9 In-Frame Intra-chr p13.33 Seq+ 26631 ChimerSeq STARFusion TCGA_RNA-Seq ERC1-WNK1 ERC1 chr12 1213990 + WNK1 chr12 987378 + Exonic hg19 ESCA TCGA-L5-A8NI 9 9 In-Frame Intra-chr p13.33 Seq+ 26632 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D14-MRFAP1 TBC1D14 chr4 6925838 + MRFAP1 chr4 6642555 + Exonic hg19 ESCA TCGA-L5-A8NI 10 5 CDS-5'UTR Intra-chr p16.1 p16.1 Seq+ 26633 ChimerSeq STARFusion TCGA_RNA-Seq TMEM160-ZC3H4 TMEM160 chr19 47549851 - ZC3H4 chr19 47585552 - Exonic hg19 ESCA TCGA-L5-A8NI 10 4 Out-of-frame Intra-chr q13.32 q13.32 Seq+ 26634 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D14-MRFAP1 TBC1D14 chr4 6925838 + MRFAP1 chr4 6643457 + Exonic hg19 ESCA TCGA-L5-A8NI 8 5 CDS-3'UTR Intra-chr p16.1 p16.1 Seq+ 26635 ChimerSeq STARFusion TCGA_RNA-Seq RBM47-APBB2 RBM47 chr4 40632125 - APBB2 chr4 40832594 - Exonic hg19 ESCA TCGA-L5-A8NI 5 15 5'UTR-5'UTR Intra-chr p14 p13 Seq+ 26636 ChimerSeq STARFusion TCGA_RNA-Seq ERC1-WNK1 ERC1 chr12 1213990 + WNK1 chr12 980431 + Exonic hg19 ESCA TCGA-L5-A8NI 6 9 In-Frame Intra-chr p13.33 Seq+ 26637 ChimerSeq STARFusion TCGA_RNA-Seq ETHE1-PLAUR ETHE1 chr19 44030667 - PLAUR chr19 44156523 - Exonic hg19 ESCA TCGA-L5-A8NI 5 10 In-Frame Intra-chr q13.31 q13.31 Seq+ 26638 ChimerSeq STARFusion TCGA_RNA-Seq ERC1-WNK1 ERC1 chr12 1213990 + WNK1 chr12 987381 + Exonic hg19 ESCA TCGA-L5-A8NI 5 9 In-Frame Intra-chr p13.33 Seq+ 26639 ChimerSeq STARFusion TCGA_RNA-Seq ETHE1-PLAUR ETHE1 chr19 44030353 - PLAUR chr19 44159725 - Exonic hg19 ESCA TCGA-L5-A8NI 3 10 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 26640 ChimerSeq STARFusion TCGA_RNA-Seq CPT1A-RNFT1 CPT1A chr11 68527037 - RNFT1 chr17 58031507 - Exonic hg19 ESCA TCGA-L5-A8NH 130 28 In-Frame Inter-chr q13.3 q23.1 Seq+ 26641 ChimerSeq STARFusion TCGA_RNA-Seq FAM134C-AP2B1 FAM134C chr17 40738783 - AP2B1 chr17 34001195 + Exonic hg19 ESCA TCGA-L5-A8NH 87 22 In-Frame Intra-chr q12 Seq+ 26642 ChimerSeq STARFusion TCGA_RNA-Seq CPT1A-RNFT1 CPT1A chr11 68527037 - RNFT1 chr17 58030472 - Exonic hg19 ESCA TCGA-L5-A8NH 41 28 In-Frame Inter-chr q13.3 q23.1 Seq+ 26643 ChimerSeq STARFusion TCGA_RNA-Seq PTP4A1-NOTCH3 PTP4A1 chr6 64282624 + NOTCH3 chr19 15280981 - Exonic hg19 ESCA TCGA-L5-A8NH 18 4 5'UTR-CDS Inter-chr q12 p13.12 Oncogene Tumor suppressor gene Seq+ 26644 ChimerSeq STARFusion TCGA_RNA-Seq ZNF827-ANAPC10 ZNF827 chr4 146744574 - ANAPC10 chr4 145916755 - Exonic hg19 ESCA TCGA-L5-A8NH 18 3 Out-of-frame Intra-chr q31.22 Transcription factor q31.21 Seq+ 26645 ChimerSeq STARFusion TCGA_RNA-Seq PTP4A1-NOTCH3 PTP4A1 chr6 64282624 + NOTCH3 chr19 15281636 - Exonic hg19 ESCA TCGA-L5-A8NH 11 4 5'UTR-CDS Inter-chr q12 p13.12 Oncogene Tumor suppressor gene Seq+ 26646 ChimerSeq STARFusion TCGA_RNA-Seq PTP4A1-NOTCH3 PTP4A1 chr6 64282624 + NOTCH3 chr19 15276902 - Exonic hg19 ESCA TCGA-L5-A8NH 8 4 5'UTR-CDS Inter-chr q12 p13.12 Oncogene Tumor suppressor gene Seq+ 26647 ChimerSeq STARFusion TCGA_RNA-Seq BAZ2B-WDR96 BAZ2B chr2 160472753 - WDR96 chr10 105893542 - Exonic hg19 ESCA TCGA-IG-A5B8 32 19 5'UTR-CDS Inter-chr q24.2 Transcription factor Seq+ 26648 ChimerSeq STARFusion TCGA_RNA-Seq S100A9-KRT17 S100A9 chr1 153333413 + KRT17 chr17 39780383 - Exonic hg19 ESCA TCGA-IG-A5B8 9 7 Out-of-frame Inter-chr q21.3 q21.2 26649 ChimerSeq STARFusion TCGA_RNA-Seq BAZ2B-WDR96 BAZ2B chr2 160472753 - WDR96 chr10 105893580 - Exonic hg19 ESCA TCGA-IG-A5B8 5 19 5'UTR-CDS Inter-chr q24.2 Transcription factor Seq+ 26650 ChimerSeq STARFusion TCGA_RNA-Seq BAZ2B-WDR96 BAZ2B chr2 160471905 - WDR96 chr10 105893542 - Exonic hg19 ESCA TCGA-IG-A5B8 5 19 5'UTR-CDS Inter-chr q24.2 Transcription factor Seq+ 26651 ChimerSeq STARFusion TCGA_RNA-Seq RNF217-TPD52L1 RNF217 chr6 125398004 + TPD52L1 chr6 125541224 + Exonic hg19 ESCA TCGA-IG-A5B8 8 6 In-Frame Intra-chr q22.31 q22.31 26652 ChimerSeq STARFusion TCGA_RNA-Seq REG1A-DDX52 REG1A chr2 79350526 + DDX52 chr17 35985986 - Exonic hg19 ESCA TCGA-L5-A8NM 26 0 Out-of-frame Inter-chr p12 q12 26653 ChimerSeq STARFusion TCGA_RNA-Seq RIPK1-SERPINB9 RIPK1 chr6 3064293 + SERPINB9 chr6 2900855 - Exonic hg19 ESCA TCGA-L5-A8NM 12 1 5'UTR-5'UTR Intra-chr p25.2 TKL:RIPK p25.2 26654 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-TSHZ2 TANC2 chr17 61396451 + TSHZ2 chr20 52103683 + Exonic hg19 ESCA TCGA-L5-A8NL 32 2 CDS-3'UTR Inter-chr q23.2 q13.2 Transcription factor Seq+ 26655 ChimerSeq STARFusion TCGA_RNA-Seq SLFN11-APBA3 SLFN11 chr17 33678167 - APBA3 chr19 3751771 - Exonic hg19 ESCA TCGA-L5-A8NL 31 1 Out-of-frame Inter-chr q12 p13.3 26656 ChimerSeq STARFusion TCGA_RNA-Seq PTPN2-L3MBTL4 PTPN2 chr18 12814202 - L3MBTL4 chr18 5969561 - Exonic hg19 ESCA TCGA-L5-A8NL 16 3 Out-of-frame Intra-chr p11.21 Tumor suppressor gene p11.31 Tumor suppressor gene Transcription factor Seq+ 26657 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-SCN4A BCAS3 chr17 59161925 + SCN4A chr17 62038791 - Exonic hg19 ESCA TCGA-L5-A8NL 15 0 In-Frame Intra-chr q23.2 q23.3 Seq+ 26658 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-MAF1 IGL@ chr22 23101693 + MAF1 chr8 145160306 + Exonic hg19 ESCA TCGA-L5-A8NL 14 0 Out-of-frame Inter-chr q11.22 q24.3 26659 ChimerSeq STARFusion TCGA_RNA-Seq TMEM241-SERPINB7 TMEM241 chr18 20889644 - SERPINB7 chr18 61449589 + Exonic hg19 ESCA TCGA-L5-A8NL 12 4 CDS-5'UTR Intra-chr q11.2 q21.33 Seq+ 26660 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57721844 + VMP1 chr17 57895073 + Exonic hg19 ESCA TCGA-R6-A6DQ 50 5 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 26661 ChimerSeq STARFusion TCGA_RNA-Seq ASAH1-IGL@ ASAH1 chr8 17941641 - IGL@ chr22 23247171 + Exonic hg19 ESCA TCGA-R6-A6DQ 43 0 Out-of-frame Inter-chr p22 q11.22 26662 ChimerSeq STARFusion TCGA_RNA-Seq ASAH1-IGLC3 ASAH1 chr8 17941641 - IGLC3 chr22 23247171 + Exonic hg19 ESCA TCGA-R6-A6DQ 43 0 Out-of-frame Inter-chr p22 q11.22 26663 ChimerSeq STARFusion TCGA_RNA-Seq ASAH1-IGLJ3 ASAH1 chr8 17941641 - IGLJ3 chr22 23247171 + Exonic hg19 ESCA TCGA-R6-A6DQ 43 0 Out-of-frame Inter-chr p22 q11.22 26664 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57756880 + VMP1 chr17 57886157 + Exonic hg19 ESCA TCGA-R6-A6KZ 119 21 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 26665 ChimerSeq STARFusion TCGA_RNA-Seq CTBP2-TLX1NB CTBP2 chr10 126848888 - TLX1NB chr10 102886855 - Exonic hg19 ESCA TCGA-R6-A6KZ 43 9 5'UTR-5'UTR Intra-chr q26.13 q24.31 Seq+ 26666 ChimerSeq STARFusion TCGA_RNA-Seq APLP2-OPCML APLP2 chr11 129939977 + OPCML chr11 132307253 - Exonic hg19 ESCA TCGA-R6-A6KZ 13 4 Out-of-frame Intra-chr q24.3 q25 Tumor suppressor gene Seq+ 26667 ChimerSeq STARFusion TCGA_RNA-Seq REG1A-DDX52 REG1A chr2 79350526 + DDX52 chr17 35985986 - Exonic hg19 ESCA TCGA-R6-A6KZ 11 0 Out-of-frame Inter-chr p12 q12 26668 ChimerSeq STARFusion TCGA_RNA-Seq CTBP2-TLX1NB CTBP2 chr10 126849396 - TLX1NB chr10 102886855 - Exonic hg19 ESCA TCGA-R6-A6KZ 5 8 5'UTR-5'UTR Intra-chr q26.13 q24.31 Seq+ 26669 ChimerSeq STARFusion TCGA_RNA-Seq SOS1-DHX57 SOS1 chr2 39237725 - DHX57 chr2 39065089 - Exonic hg19 ESCA TCGA-IG-A3YB 17 5 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 26670 ChimerSeq STARFusion TCGA_RNA-Seq KIF5C-STK39 KIF5C chr2 149633312 + STK39 chr2 169038600 - Exonic hg19 ESCA TCGA-IG-A3YB 12 9 Out-of-frame Intra-chr q24.3 Seq+ 26671 ChimerSeq STARFusion TCGA_RNA-Seq PRR4-YBX3 PRR4 chr12 11324021 - YBX3 chr12 10871742 - Exonic hg19 ESCA TCGA-IG-A3YB 11 4 Out-of-frame Intra-chr p13.2 Transcription factor 26672 ChimerSeq STARFusion TCGA_RNA-Seq TAS2R14-YBX3 TAS2R14 chr12 11324021 - YBX3 chr12 10871742 - Exonic hg19 ESCA TCGA-IG-A3YB 11 4 Out-of-frame Intra-chr p13.2 Transcription factor 26673 ChimerSeq STARFusion TCGA_RNA-Seq NABP1-ARPC1A NABP1 chr2 192558142 + ARPC1A chr7 98957168 + Exonic hg19 ESCA TCGA-IG-A3YB 8 7 Out-of-frame Inter-chr q32.3 q22.1 26674 ChimerSeq STARFusion TCGA_RNA-Seq ZNF558-RPL39 ZNF558 chr19 8941994 - RPL39 chrX 118923974 - Exonic hg19 ESCA TCGA-IG-A3YC 15 5 5'UTR-CDS Inter-chr p13.2 Transcription factor q24 26675 ChimerSeq STARFusion TCGA_RNA-Seq ZNF558-IFLTD1 ZNF558 chr19 8941994 - IFLTD1 chr12 25562376 - Exonic hg19 ESCA TCGA-IG-A3YC 7 5 Out-of-frame Inter-chr p13.2 Transcription factor Tumor suppressor gene 26676 ChimerSeq STARFusion TCGA_RNA-Seq PUS7-SRPK2 PUS7 chr7 105103068 - SRPK2 chr7 104755950 - Exonic hg19 ESCA TCGA-IG-A51D 37 12 CDS-3'UTR Intra-chr q22.3 q22.3 CMGC:SRPK 26677 ChimerSeq STARFusion TCGA_RNA-Seq FUS-IL9R FUS chr16 31193985 + IL9R chrY 59335577 + Exonic hg19 ESCA TCGA-IG-A51D 20 11 In-Frame Inter-chr p11.2 Tumor suppressor gene q28 Seq+ 26678 ChimerSeq STARFusion TCGA_RNA-Seq FUS-IL9R FUS chr16 31193985 + IL9R chrY 59337091 + Exonic hg19 ESCA TCGA-IG-A51D 10 6 In-Frame Inter-chr p11.2 Tumor suppressor gene q28 Seq+ 26679 ChimerSeq STARFusion TCGA_RNA-Seq FUS-IL9R FUS chr16 31193985 + IL9R chrX 155232571 + Exonic hg19 ESCA TCGA-IG-A51D 7 6 CDS-3'UTR Inter-chr p11.2 Tumor suppressor gene q28 Seq+ 26680 ChimerSeq STARFusion TCGA_RNA-Seq PUS7-SRPK2 PUS7 chr7 105105760 - SRPK2 chr7 104755950 - Exonic hg19 ESCA TCGA-IG-A51D 4 12 CDS-3'UTR Intra-chr q22.3 q22.3 CMGC:SRPK 26681 ChimerSeq STARFusion TCGA_RNA-Seq EHF-BDNF EHF chr11 34673352 + BDNF chr11 27680132 - Exonic hg19 ESCA TCGA-R6-A6DN 13 6 Out-of-frame Intra-chr p13 Tumor suppressor gene Transcription factor p14.1 Seq+ 26682 ChimerSeq STARFusion TCGA_RNA-Seq RPL13P12-PNMA2 RPL13P12 chr17 17286669 - PNMA2 chr8 26364477 - Exonic hg19 ESCA TCGA-R6-A6DN 13 0 Out-of-frame Inter-chr p21.2 26683 ChimerSeq STARFusion TCGA_RNA-Seq EHF-BDNF EHF chr11 34673153 + BDNF chr11 27680132 - Exonic hg19 ESCA TCGA-R6-A6DN 9 6 Out-of-frame Intra-chr p13 Tumor suppressor gene Transcription factor p14.1 Seq+ 26684 ChimerSeq STARFusion TCGA_RNA-Seq EHF-BDNF EHF chr11 34673157 + BDNF chr11 27680132 - Exonic hg19 ESCA TCGA-R6-A6DN 9 6 Out-of-frame Intra-chr p13 Tumor suppressor gene Transcription factor p14.1 Seq+ 26685 ChimerSeq STARFusion TCGA_RNA-Seq TXN-GNB1 TXN chr9 113007058 - GNB1 chr1 1720708 - Exonic hg19 ESCA TCGA-LN-A9FR 79 12 In-Frame Inter-chr q31.3 p36.33 Seq+ 26686 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-TXN GNB1 chr1 1721834 - TXN chr9 113013144 - Exonic hg19 ESCA TCGA-LN-A9FR 53 11 In-Frame Inter-chr p36.33 q31.3 Seq+ 26687 ChimerSeq STARFusion TCGA_RNA-Seq TTLL1-PACSIN2 TTLL1 chr22 43442416 - PACSIN2 chr22 43308163 - Exonic hg19 ESCA TCGA-LN-A9FQ 16 3 CDS-5'UTR Intra-chr q13.2 q13.2 26688 ChimerSeq STARFusion TCGA_RNA-Seq NPC2-AREL1 NPC2 chr14 74959896 - AREL1 chr14 75143455 - Exonic hg19 ESCA TCGA-LN-A9FP 10 3 Out-of-frame Intra-chr q24.3 q24.3 26689 ChimerSeq STARFusion TCGA_RNA-Seq GAPVD1-RABEPK GAPVD1 chr9 128031263 + RABEPK chr9 127990189 + Exonic hg19 ESCA TCGA-ZR-A9CJ 20 7 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 26690 ChimerSeq STARFusion TCGA_RNA-Seq GAPVD1-RABEPK GAPVD1 chr9 128024238 + RABEPK chr9 127990189 + Exonic hg19 ESCA TCGA-ZR-A9CJ 15 7 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 26691 ChimerSeq STARFusion TCGA_RNA-Seq EOGT-IGH@ EOGT chr3 69062755 - IGH@ chr14 106111119 - Exonic hg19 ESCA TCGA-JY-A93C 85 0 Out-of-frame Inter-chr p14.1 32.33 26692 ChimerSeq STARFusion TCGA_RNA-Seq EOGT-IGHG2 EOGT chr3 69062755 - IGHG2 chr14 106111119 - Exonic hg19 ESCA TCGA-JY-A93C 85 0 Out-of-frame Inter-chr p14.1 26693 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106111129 - Exonic hg19 ESCA TCGA-JY-A93C 72 0 Out-of-frame Inter-chr q37.3 26694 ChimerSeq STARFusion TCGA_RNA-Seq EOGT-IGH@ EOGT chr3 69062755 - IGH@ chr14 106092395 - Exonic hg19 ESCA TCGA-JY-A93C 17 0 Out-of-frame Inter-chr p14.1 32.33 26695 ChimerSeq STARFusion TCGA_RNA-Seq HCFC1-IGHG2 HCFC1 chrX 153222122 - IGHG2 chr14 106111130 - Exonic hg19 ESCA TCGA-JY-A93C 17 0 Out-of-frame Inter-chr q28 26696 ChimerSeq STARFusion TCGA_RNA-Seq EOGT-IGH@ EOGT chr3 69062755 - IGH@ chr14 106237735 - Exonic hg19 ESCA TCGA-JY-A93C 12 0 Out-of-frame Inter-chr p14.1 32.33 26697 ChimerSeq STARFusion TCGA_RNA-Seq CTCF-KIAA0895L CTCF chr16 67605167 + KIAA0895L chr16 67212407 - Exonic hg19 ESCA TCGA-JY-A93F 9 5 5'UTR-CDS Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 Seq+ 26698 ChimerSeq STARFusion TCGA_RNA-Seq KRT5-SPRR1A KRT5 chr12 52914132 - SPRR1A chr1 152957948 + Exonic hg19 ESCA TCGA-JY-A93F 3 10 Out-of-frame Inter-chr q13.13 q21.3 26699 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-IGHG4 DHRSX chrX 2184825 - IGHG4 chr14 106092400 - Exonic hg19 ESCA TCGA-JY-A93E 27 0 Out-of-frame Inter-chr p22.33 26700 ChimerSeq STARFusion TCGA_RNA-Seq SPIDR-BLK SPIDR chr8 48206619 + BLK chr8 11400733 + Exonic hg19 ESCA TCGA-JY-A93E 16 2 Out-of-frame Intra-chr q11.21 p23.1 TK:Src Seq+ 26701 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1737458 + Exonic hg19 ESCA TCGA-LN-A9FO 494 79 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 26702 ChimerSeq STARFusion TCGA_RNA-Seq IGHMBP2-CPT1A IGHMBP2 chr11 68685351 + CPT1A chr11 68582955 - Exonic hg19 ESCA TCGA-LN-A9FO 22 2 CDS-5'UTR Intra-chr q13.3 q13.3 Seq+ 26703 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010681 - TTC18 chr10 75016173 - Exonic hg19 ESCA TCGA-2H-A9GN 224 122 Out-of-frame Intra-chr q22.2 26704 ChimerSeq STARFusion TCGA_RNA-Seq ZNF787-CYP2A13 ZNF787 chr19 56632541 - CYP2A13 chr19 41594323 + Exonic hg19 ESCA TCGA-2H-A9GN 179 125 5'UTR-5'UTR Intra-chr q13.43 Transcription factor q13.2 26705 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010573 - TTC18 chr10 75016174 - Exonic hg19 ESCA TCGA-2H-A9GN 98 120 3'UTR-CDS Intra-chr q22.2 26706 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010596 - TTC18 chr10 75016174 - Exonic hg19 ESCA TCGA-2H-A9GN 66 120 3'UTR-CDS Intra-chr q22.2 26707 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 125020111 - SCARB1 chr12 125271049 - Exonic hg19 ESCA TCGA-2H-A9GN 81 42 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 26708 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK4-TMOD3 EIF2AK4 chr15 40247969 + TMOD3 chr15 52223228 + Exonic hg19 ESCA TCGA-2H-A9GN 74 41 CDS-3'UTR Intra-chr q15.1 q21.2 Seq+ 26709 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 125020111 - SCARB1 chr12 125263132 - Exonic hg19 ESCA TCGA-2H-A9GN 37 42 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 26710 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK4-TMOD3 EIF2AK4 chr15 40247969 + TMOD3 chr15 52226447 + Exonic hg19 ESCA TCGA-2H-A9GN 20 41 CDS-3'UTR Intra-chr q15.1 q21.2 Seq+ 26711 ChimerSeq STARFusion TCGA_RNA-Seq LRFN1-DLL3 LRFN1 chr19 39804571 - DLL3 chr19 39993455 + Exonic hg19 ESCA TCGA-2H-A9GN 23 5 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 26712 ChimerSeq STARFusion TCGA_RNA-Seq LPCAT4-SPRED1 LPCAT4 chr15 34654397 - SPRED1 chr15 38591574 + Exonic hg19 ESCA TCGA-2H-A9GN 22 6 In-Frame Intra-chr q14 q14 Seq+ 26713 ChimerSeq STARFusion TCGA_RNA-Seq FCGBP-SPTAN1 FCGBP chr19 40408824 - SPTAN1 chr9 131314900 + Exonic hg19 ESCA TCGA-2H-A9GN 21 0 Out-of-frame Inter-chr q34.11 26714 ChimerSeq STARFusion TCGA_RNA-Seq LTA4H-CDK17 LTA4H chr12 96400092 - CDK17 chr12 96694138 - Exonic hg19 ESCA TCGA-2H-A9GN 20 4 In-Frame Intra-chr q23.1 q23.1 Seq+ 26715 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK4-TMOD3 EIF2AK4 chr15 40247969 + TMOD3 chr15 52239187 + Exonic hg19 ESCA TCGA-2H-A9GN 10 41 CDS-3'UTR Intra-chr q15.1 q21.2 Seq+ 26716 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK4-TMOD3 EIF2AK4 chr15 40247969 + TMOD3 chr15 52221630 + Exonic hg19 ESCA TCGA-2H-A9GN 9 41 CDS-3'UTR Intra-chr q15.1 q21.2 Seq+ 26717 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 ESCA TCGA-2H-A9GN 19 0 Out-of-frame Inter-chr q13.33 p21.1 26718 ChimerSeq STARFusion TCGA_RNA-Seq FAM188B-ZNRF2 FAM188B chr7 30821828 + ZNRF2 chr7 30405651 + Exonic hg19 ESCA TCGA-2H-A9GN 18 3 CDS-3'UTR Intra-chr p14.3 Seq+ 26719 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-CTAGE11P INTS1 chr7 1542537 - CTAGE11P chr13 75813431 - Exonic hg19 ESCA TCGA-2H-A9GN 15 8 CDS-3'UTR Inter-chr p22.3 q22.2 26720 ChimerSeq STARFusion TCGA_RNA-Seq GNAI3-CYB561D1 GNAI3 chr1 110129504 + CYB561D1 chr1 110037765 + Exonic hg19 ESCA TCGA-2H-A9GN 13 12 In-Frame Intra-chr p13.3 p13.3 Seq+ 26721 ChimerSeq STARFusion TCGA_RNA-Seq PANK4-TTC34 PANK4 chr1 2441301 - TTC34 chr1 2577002 - Exonic hg19 ESCA TCGA-2H-A9GN 15 2 Out-of-frame Intra-chr p36.32 Seq+ 26722 ChimerSeq STARFusion TCGA_RNA-Seq WNT5B-WNK1 WNT5B chr12 1640116 + WNK1 chr12 922808 + Exonic hg19 ESCA TCGA-2H-A9GN 15 2 5'UTR-CDS Intra-chr p13.33 p13.33 26723 ChimerSeq STARFusion TCGA_RNA-Seq TRPC4AP-UQCC1 TRPC4AP chr20 33632308 - UQCC1 chr20 33894582 - Exonic hg19 ESCA TCGA-2H-A9GN 14 2 Out-of-frame Intra-chr q11.22 q11.22 26724 ChimerSeq STARFusion TCGA_RNA-Seq ALYREF-CCDC57 ALYREF chr17 79846317 - CCDC57 chr17 80113504 - Exonic hg19 ESCA TCGA-2H-A9GN 12 2 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 26725 ChimerSeq STARFusion TCGA_RNA-Seq DMPK-SLPI DMPK chr19 46278207 - SLPI chr20 43882374 - Exonic hg19 ESCA TCGA-2H-A9GN 11 2 Out-of-frame Inter-chr q13.32 q13.12 Seq+ 26726 ChimerSeq STARFusion TCGA_RNA-Seq DGAT1-TONSL DGAT1 chr8 145544984 - TONSL chr8 145662482 - Exonic hg19 ESCA TCGA-2H-A9GN 10 4 In-Frame Intra-chr q24.3 q24.3 Seq+ 26727 ChimerSeq STARFusion TCGA_RNA-Seq KANSL2-DDX23 KANSL2 chr12 49061547 - DDX23 chr12 49224475 - Exonic hg19 ESCA TCGA-2H-A9GN 9 5 In-Frame Intra-chr q13.11 q13.12 26728 ChimerSeq STARFusion TCGA_RNA-Seq C19orf47-ZNF568 C19orf47 chr19 40828820 - ZNF568 chr19 37440445 + Exonic hg19 ESCA TCGA-2H-A9GN 8 5 Out-of-frame Intra-chr q13.2 q13.12 Transcription factor 26729 ChimerSeq STARFusion TCGA_RNA-Seq GNAI3-CYB561D1 GNAI3 chr1 110129504 + CYB561D1 chr1 110037142 + Exonic hg19 ESCA TCGA-2H-A9GN 2 12 In-Frame Intra-chr p13.3 p13.3 Seq+ 26730 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-MIEN1 GRB7 chr17 37898709 + MIEN1 chr17 37886544 - Exonic hg19 ESCA TCGA-2H-A9GF 726 233 In-Frame Intra-chr q12 q12 Seq+ 26731 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-IKZF3 STARD3 chr17 37793484 + IKZF3 chr17 37988404 - Exonic hg19 ESCA TCGA-2H-A9GF 294 162 5'UTR-CDS Intra-chr q12 q21.1 Tumor suppressor gene Transcription factor Seq+ 26732 ChimerSeq STARFusion TCGA_RNA-Seq CNP-TTC25 CNP chr17 40125765 + TTC25 chr17 40117011 + Exonic hg19 ESCA TCGA-2H-A9GF 139 51 Out-of-frame Intra-chr q21.2 q21.2 26733 ChimerSeq STARFusion TCGA_RNA-Seq STARD13-CAB39L STARD13 chr13 33924427 - CAB39L chr13 49957077 - Exonic hg19 ESCA TCGA-2H-A9GF 72 33 5'UTR-5'UTR Intra-chr q13.1 Tumor suppressor gene q14.2 Seq+ 26734 ChimerSeq STARFusion TCGA_RNA-Seq SYNRG-DDX52 SYNRG chr17 35928893 - DDX52 chr17 35969957 - Exonic hg19 ESCA TCGA-2H-A9GF 50 11 CDS-3'UTR Intra-chr q12 Seq+ 26735 ChimerSeq STARFusion TCGA_RNA-Seq AGAP1-C1orf115 AGAP1 chr2 236877267 + C1orf115 chr1 220869954 + Exonic hg19 ESCA TCGA-2H-A9GF 32 10 Out-of-frame Inter-chr q37.2 q41 Seq+ 26736 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-PGAP3 ERBB2 chr17 37856564 + PGAP3 chr17 37842272 - Exonic hg19 ESCA TCGA-2H-A9GF 25 19 In-Frame Intra-chr q12 Oncogene q12 Oncogene Seq+ 26737 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-PGAP3 ERBB2 chr17 37856564 + PGAP3 chr17 37830932 - Exonic hg19 ESCA TCGA-2H-A9GF 9 19 Out-of-frame Intra-chr q12 Oncogene q12 Oncogene Seq+ 26738 ChimerSeq STARFusion TCGA_RNA-Seq USP18-ADM2 USP18 chr22 18644253 + ADM2 chr22 50920021 + Exonic hg19 ESCA TCGA-2H-A9GF 8 3 Out-of-frame Intra-chr q11.21 q13.33 Seq+ 26739 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-PGAP3 ERBB2 chr17 37856564 + PGAP3 chr17 37841002 - Exonic hg19 ESCA TCGA-2H-A9GF 3 19 Out-of-frame Intra-chr q12 Oncogene q12 Oncogene Seq+ 26740 ChimerSeq STARFusion TCGA_RNA-Seq DECR1-STAU2 DECR1 chr8 91013789 + STAU2 chr8 74464554 - Exonic hg19 ESCA TCGA-2H-A9GG 239 103 Out-of-frame Intra-chr q21.3 q21.11 Seq+ 26741 ChimerSeq STARFusion TCGA_RNA-Seq RUNX1T1-ZC2HC1A RUNX1T1 chr8 93088193 - ZC2HC1A chr8 79590798 + Exonic hg19 ESCA TCGA-2H-A9GG 83 67 Out-of-frame Intra-chr q21.3 Oncogene q21.13 Seq+ 26742 ChimerSeq STARFusion TCGA_RNA-Seq POU2F1-MAEL POU2F1 chr1 167190195 + MAEL chr1 166973417 + Exonic hg19 ESCA TCGA-2H-A9GG 92 2 In-Frame Intra-chr q24.2 Transcription factor q24.1 Seq+ 26743 ChimerSeq STARFusion TCGA_RNA-Seq RUNX1T1-ZC2HC1A RUNX1T1 chr8 93115085 - ZC2HC1A chr8 79590798 + Exonic hg19 ESCA TCGA-2H-A9GG 62 67 Out-of-frame Intra-chr q21.3 Oncogene q21.13 Seq+ 26744 ChimerSeq STARFusion TCGA_RNA-Seq RUNX1T1-ZC2HC1A RUNX1T1 chr8 93074774 - ZC2HC1A chr8 79590798 + Exonic hg19 ESCA TCGA-2H-A9GG 46 67 Out-of-frame Intra-chr q21.3 Oncogene q21.13 Seq+ 26745 ChimerSeq STARFusion TCGA_RNA-Seq NFIX-DOCK6 NFIX chr19 13136366 + DOCK6 chr19 11364402 - Exonic hg19 ESCA TCGA-2H-A9GG 41 8 Out-of-frame Intra-chr p13.13 Transcription factor p13.2 Seq+ 26746 ChimerSeq STARFusion TCGA_RNA-Seq RUNX1T1-ZC2HC1A RUNX1T1 chr8 93107256 - ZC2HC1A chr8 79590798 + Exonic hg19 ESCA TCGA-2H-A9GG 26 67 Out-of-frame Intra-chr q21.3 Oncogene q21.13 Seq+ 26747 ChimerSeq STARFusion TCGA_RNA-Seq DOCK6-NFIX DOCK6 chr19 11373073 - NFIX chr19 13183861 + Exonic hg19 ESCA TCGA-2H-A9GG 22 34 Out-of-frame Intra-chr p13.2 p13.13 Transcription factor Seq+ 26748 ChimerSeq STARFusion TCGA_RNA-Seq HOXA10-CSN1S1 HOXA10 chr7 27212968 - CSN1S1 chr4 70798262 + Exonic hg19 ESCA TCGA-2H-A9GG 27 13 CDS-5'UTR Inter-chr p15.2 Transcription factor q13.3 Seq+ 26749 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-TMEM67 PVT1 chr8 128806980 + TMEM67 chr8 94808129 + Exonic hg19 ESCA TCGA-2H-A9GG 21 32 5'UTR-5'UTR Intra-chr q24.21 q22.1 Seq+ 26750 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-TMEM67 PVT1 chr8 128806980 + TMEM67 chr8 94807637 + Exonic hg19 ESCA TCGA-2H-A9GG 14 32 5'UTR-5'UTR Intra-chr q24.21 q22.1 Seq+ 26751 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-TMEM67 PVT1 chr8 128808254 + TMEM67 chr8 94807637 + Exonic hg19 ESCA TCGA-2H-A9GG 12 32 5'UTR-5'UTR Intra-chr q24.21 q22.1 Seq+ 26752 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142481912 + KLK5 chr19 51447042 - Exonic hg19 ESCA TCGA-2H-A9GG 13 0 3'UTR-CDS Inter-chr q13.41 26753 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-TMEM67 PVT1 chr8 128808317 + TMEM67 chr8 94807637 + Exonic hg19 ESCA TCGA-2H-A9GG 5 32 5'UTR-5'UTR Intra-chr q24.21 q22.1 Seq+ 26754 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-TMEM67 PVT1 chr8 128808254 + TMEM67 chr8 94808129 + Exonic hg19 ESCA TCGA-2H-A9GG 5 32 5'UTR-5'UTR Intra-chr q24.21 q22.1 Seq+ 26755 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D16-CASC1 TBC1D16 chr17 78009594 - CASC1 chr12 25314131 - Exonic hg19 ESCA TCGA-2H-A9GG 11 6 5'UTR-5'UTR Inter-chr q25.3 p12.1 Tumor suppressor gene Seq+ 26756 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142471340 + KLK5 chr19 51447042 - Exonic hg19 ESCA TCGA-2H-A9GG 12 0 3'UTR-CDS Inter-chr q13.41 26757 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142460418 + KLK5 chr19 51447042 - Exonic hg19 ESCA TCGA-2H-A9GG 12 0 In-Frame Inter-chr q13.41 26758 ChimerSeq STARFusion TCGA_RNA-Seq PPP1CA-TMEM134 PPP1CA chr11 67169199 - TMEM134 chr11 67234859 - Exonic hg19 ESCA TCGA-2H-A9GG 6 20 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 Seq+ 26759 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-TNFRSF11B PVT1 chr8 128806980 + TNFRSF11B chr8 119945539 - Exonic hg19 ESCA TCGA-2H-A9GG 10 2 5'UTR-CDS Intra-chr q24.21 q24.12 Seq+ 26760 ChimerSeq STARFusion TCGA_RNA-Seq KLF5-PIBF1 KLF5 chr13 73638021 + PIBF1 chr13 73590007 + Exonic hg19 ESCA TCGA-LN-A4MQ 433 99 Out-of-frame Intra-chr q22.1 Tumor suppressor gene Transcription factor q21.33 Seq+ 26761 ChimerSeq STARFusion TCGA_RNA-Seq PPIB-CSNK1G1 PPIB chr15 64454240 - CSNK1G1 chr15 64472653 - Exonic hg19 ESCA TCGA-LN-A4MQ 31 8 In-Frame Intra-chr q22.31 q22.31 26762 ChimerSeq STARFusion TCGA_RNA-Seq PPIB-CSNK1G1 PPIB chr15 64454240 - CSNK1G1 chr15 64480684 - Exonic hg19 ESCA TCGA-LN-A4MQ 28 8 Out-of-frame Intra-chr q22.31 q22.31 26763 ChimerSeq STARFusion TCGA_RNA-Seq ALG12-IL17REL ALG12 chr22 50303542 - IL17REL chr22 50447093 - Exonic hg19 ESCA TCGA-LN-A4MQ 10 7 CDS-5'UTR Intra-chr q13.33 q13.33 Seq+ 26764 ChimerSeq STARFusion TCGA_RNA-Seq NOMO1-ABCC1 NOMO1 chr16 14966186 + ABCC1 chr16 16138307 + Exonic hg19 ESCA TCGA-LN-A4MQ 8 8 In-Frame Intra-chr 26765 ChimerSeq STARFusion TCGA_RNA-Seq SEPT2-RHOH SEPT2 chr2 242277205 + RHOH chr4 40244334 + Exonic hg19 ESCA TCGA-LN-A4MQ 7 5 CDS-5'UTR Inter-chr q37.3 p14 Oncogene Seq+ 26766 ChimerSeq STARFusion TCGA_RNA-Seq EPC1-AKR1E2 EPC1 chr10 32635691 - AKR1E2 chr10 4872867 + Exonic hg19 ESCA TCGA-IG-A8O2 53 17 In-Frame Intra-chr p11.22 p15.1 Seq+ 26767 ChimerSeq STARFusion TCGA_RNA-Seq PARD3-NRXN1 PARD3 chr10 34985246 - NRXN1 chr2 50318632 - Exonic hg19 ESCA TCGA-IG-A8O2 46 13 In-Frame Inter-chr p11.21 p16.3 Seq+ 26768 ChimerSeq STARFusion TCGA_RNA-Seq NUMA1-IQSEC3 NUMA1 chr11 71780888 - IQSEC3 chr12 208312 + Exonic hg19 ESCA TCGA-IG-A8O2 36 13 5'UTR-5'UTR Inter-chr q13.4 Oncogene Seq+ 26769 ChimerSeq STARFusion TCGA_RNA-Seq BCL11A-PTPLA BCL11A chr2 60773106 - PTPLA chr10 17646046 - Exonic hg19 ESCA TCGA-IG-A8O2 29 7 Out-of-frame Inter-chr p16.1 Oncogene Transcription factor Seq+ 26770 ChimerSeq STARFusion TCGA_RNA-Seq ZNF418-USP25 ZNF418 chr19 58441796 - USP25 chr21 17203720 + Exonic hg19 ESCA TCGA-IG-A8O2 16 1 Out-of-frame Inter-chr q13.43 Transcription factor q21.1 Seq+ 26771 ChimerSeq STARFusion TCGA_RNA-Seq EML4-EPHA3 EML4 chr2 42528532 + EPHA3 chr3 89498375 + Exonic hg19 ESCA TCGA-IG-A8O2 14 3 In-Frame Inter-chr p21 Oncogene p11.1 Oncogene Tumor suppressor gene Seq+ 26772 ChimerSeq STARFusion TCGA_RNA-Seq MPP7-ZEB1 MPP7 chr10 28491082 - ZEB1 chr10 31791276 + Exonic hg19 ESCA TCGA-IG-A8O2 14 2 Out-of-frame Intra-chr p12.1 p11.22 Transcription factor Seq+ 26773 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 ESCA TCGA-IG-A8O2 13 0 Out-of-frame Inter-chr q13.33 p21.1 26774 ChimerSeq STARFusion TCGA_RNA-Seq EPC1-AKR1E2 EPC1 chr10 32667419 - AKR1E2 chr10 4872867 + Exonic hg19 ESCA TCGA-IG-A8O2 8 17 5'UTR-CDS Intra-chr p11.22 p15.1 Seq+ 26775 ChimerSeq STARFusion TCGA_RNA-Seq TRIM26-DHX16 TRIM26 chr6 30181082 - DHX16 chr6 30628019 - Exonic hg19 ESCA TCGA-JY-A939 386 67 5'UTR-CDS Intra-chr Seq+ 26776 ChimerSeq STARFusion TCGA_RNA-Seq TRIM26-DHX16 TRIM26 chr6 30181082 - DHX16 chr6 30627611 - Exonic hg19 ESCA TCGA-JY-A939 219 67 5'UTR-CDS Intra-chr Seq+ 26777 ChimerSeq STARFusion TCGA_RNA-Seq DYNC1LI1-LIPF DYNC1LI1 chr3 32587404 - LIPF chr10 90428316 + Exonic hg19 ESCA TCGA-JY-A939 40 0 Out-of-frame Inter-chr p22.3 q23.31 26778 ChimerSeq STARFusion TCGA_RNA-Seq PGA3-LIPF PGA3 chr11 60978861 + LIPF chr10 90438374 + Exonic hg19 ESCA TCGA-JY-A939 3 98 Out-of-frame Inter-chr q12.2 q23.31 26779 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076852 + IGH@ chr14 106209410 - Exonic hg19 ESCA TCGA-JY-A939 27 0 Out-of-frame Inter-chr q21.2 32.33 26780 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076852 + IGHG1 chr14 106209410 - Exonic hg19 ESCA TCGA-JY-A939 27 0 Out-of-frame Inter-chr q21.2 q32.33 26781 ChimerSeq STARFusion TCGA_RNA-Seq PGA3-MUC6 PGA3 chr11 60975005 + MUC6 chr11 1017266 - Exonic hg19 ESCA TCGA-JY-A939 4 58 Out-of-frame Intra-chr q12.2 26782 ChimerSeq STARFusion TCGA_RNA-Seq PGA3-MUC6 PGA3 chr11 60975005 + MUC6 chr11 1016627 - Exonic hg19 ESCA TCGA-JY-A939 3 58 Out-of-frame Intra-chr q12.2 26783 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076857 + IGH@ chr14 106237740 - Exonic hg19 ESCA TCGA-JY-A939 15 0 Out-of-frame Inter-chr q21.2 32.33 26784 ChimerSeq STARFusion TCGA_RNA-Seq C1orf35-PGA4 C1orf35 chr1 228290835 - PGA4 chr11 60992809 + Exonic hg19 ESCA TCGA-JY-A939 14 0 Out-of-frame Inter-chr q42.13 q12.2 26785 ChimerSeq STARFusion TCGA_RNA-Seq C1orf35-PGA5 C1orf35 chr1 228290835 - PGA5 chr11 61011635 + Exonic hg19 ESCA TCGA-JY-A939 14 0 Out-of-frame Inter-chr q42.13 q12.2 26786 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106237746 - Exonic hg19 ESCA TCGA-JY-A939 13 0 Out-of-frame Inter-chr q21.2 32.33 26787 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-MUC6 LIPF chr10 90438314 + MUC6 chr11 1017565 - Exonic hg19 ESCA TCGA-JY-A939 4 32 Out-of-frame Inter-chr q23.31 26788 ChimerSeq STARFusion TCGA_RNA-Seq RNF4-WHSC1 RNF4 chr4 2502465 + WHSC1 chr4 1952799 + Exonic hg19 ESCA TCGA-JY-A938 96 19 In-Frame Intra-chr p16.3 Oncogene Seq+ 26789 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128505577 - RSPO3 chr6 127469793 + Exonic hg19 ESCA TCGA-JY-A938 71 23 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 26790 ChimerSeq STARFusion TCGA_RNA-Seq PAWR-PPP1R12A PAWR chr12 80083509 - PPP1R12A chr12 80266718 - Exonic hg19 ESCA TCGA-JY-A938 48 10 In-Frame Intra-chr q21.2 Tumor suppressor gene q21.31 Seq+ 26791 ChimerSeq STARFusion TCGA_RNA-Seq C3-ZNF556 C3 chr19 6690640 - ZNF556 chr19 2873494 + Exonic hg19 ESCA TCGA-JY-A938 28 7 In-Frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 26792 ChimerSeq STARFusion TCGA_RNA-Seq SLC2A12-SAMD3 SLC2A12 chr6 134373516 - SAMD3 chr6 130634238 - Exonic hg19 ESCA TCGA-JY-A938 12 5 CDS-5'UTR Intra-chr q23.2 q23.1 Seq+ 26793 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-ARHGAP18 PTPRK chr6 128505577 - ARHGAP18 chr6 129939997 - Exonic hg19 ESCA TCGA-JY-A938 11 2 Out-of-frame Intra-chr Tumor suppressor gene q22.33 Seq+ 26794 ChimerSeq STARFusion TCGA_RNA-Seq CPNE8-MGST1 CPNE8 chr12 39155914 - MGST1 chr12 16507165 + Exonic hg19 ESCA TCGA-2H-A9GH 36 14 CDS-5'UTR Intra-chr q12 p12.3 Seq+ 26795 ChimerSeq STARFusion TCGA_RNA-Seq NLRC5-FTO NLRC5 chr16 57080553 + FTO chr16 54145674 + Exonic hg19 ESCA TCGA-2H-A9GH 26 10 In-Frame Intra-chr q13 q12.2 Seq+ 26796 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-CEACAM5 LYZ chr12 69747266 + CEACAM5 chr19 42233378 + Exonic hg19 ESCA TCGA-2H-A9GH 8 27 Out-of-frame Inter-chr q15 q13.2 26797 ChimerSeq STARFusion TCGA_RNA-Seq NLRC5-FTO NLRC5 chr16 57079404 + FTO chr16 54145674 + Exonic hg19 ESCA TCGA-2H-A9GH 11 10 In-Frame Intra-chr q13 q12.2 Seq+ 26798 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890980 - BCAR4 chr16 11914154 - Exonic hg19 ESCA TCGA-2H-A9GH 10 8 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 26799 ChimerSeq STARFusion TCGA_RNA-Seq LEPR-MEF2D LEPR chr1 66070920 + MEF2D chr1 156438812 - Exonic hg19 ESCA TCGA-2H-A9GH 10 6 In-Frame Intra-chr p31.3 q22 Transcription factor Seq+ 26800 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-CEACAM5 LYZ chr12 69747259 + CEACAM5 chr19 42233371 + Exonic hg19 ESCA TCGA-2H-A9GH 5 26 Out-of-frame Inter-chr q15 q13.2 26801 ChimerSeq STARFusion TCGA_RNA-Seq BIRC6-TTC27 BIRC6 chr2 32774548 + TTC27 chr2 32958895 + Exonic hg19 ESCA TCGA-2H-A9GH 5 7 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 26802 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-LYZ CEACAM5 chr19 42225089 + LYZ chr12 69747485 + Exonic hg19 ESCA TCGA-2H-A9GH 3 8 Out-of-frame Inter-chr q13.2 q15 26803 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890980 - BCAR4 chr16 11915612 - Exonic hg19 ESCA TCGA-2H-A9GH 3 8 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 26804 ChimerSeq STARFusion TCGA_RNA-Seq YTHDC1-GAK YTHDC1 chr4 69215444 - GAK chr4 891946 - Exonic hg19 ESCA TCGA-2H-A9GI 64 14 Out-of-frame Intra-chr p16.3 Other:NAK Seq+ 26805 ChimerSeq STARFusion TCGA_RNA-Seq TNS4-WIPF2 TNS4 chr17 38636952 - WIPF2 chr17 38412643 + Exonic hg19 ESCA TCGA-2H-A9GI 56 34 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 26806 ChimerSeq STARFusion TCGA_RNA-Seq TNS4-WIPF2 TNS4 chr17 38635926 - WIPF2 chr17 38412643 + Exonic hg19 ESCA TCGA-2H-A9GI 20 33 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 26807 ChimerSeq STARFusion TCGA_RNA-Seq MAN2B1-FBXW9 MAN2B1 chr19 12759950 - FBXW9 chr19 12802268 - Exonic hg19 ESCA TCGA-2H-A9GI 24 5 In-Frame Intra-chr p13.13 p13.13 Seq+ 26808 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB5-SLC24A2 ZBTB5 chr9 37465212 - SLC24A2 chr9 19577020 - Exonic hg19 ESCA TCGA-2H-A9GI 16 2 5'UTR-CDS Intra-chr p13.2 Transcription factor p22.1 Seq+ 26809 ChimerSeq STARFusion TCGA_RNA-Seq TOLLIP-MUC5B TOLLIP chr11 1307232 - MUC5B chr11 1273573 + Exonic hg19 ESCA TCGA-2H-A9GI 14 6 In-Frame Intra-chr p15.5 p15.5 Seq+ 26810 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-TMEM99 WIPF2 chr17 38412774 + TMEM99 chr17 38989367 + Exonic hg19 ESCA TCGA-2H-A9GI 12 3 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 26811 ChimerSeq STARFusion TCGA_RNA-Seq GOSR1-CPD GOSR1 chr17 28811788 + CPD chr17 28788198 + Exonic hg19 ESCA TCGA-2H-A9GJ 78 25 In-Frame Intra-chr q11.2 q11.2 Tumor suppressor gene Seq+ 26812 ChimerSeq STARFusion TCGA_RNA-Seq DDAH2-SLC44A4 DDAH2 chr6 31697828 - SLC44A4 chr6 31833561 - Exonic hg19 ESCA TCGA-2H-A9GJ 62 28 5'UTR-CDS Intra-chr Seq+ 26813 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA6-LRRN2 PLEKHA6 chr1 204336927 - LRRN2 chr1 204589346 - Exonic hg19 ESCA TCGA-2H-A9GJ 51 24 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 26814 ChimerSeq STARFusion TCGA_RNA-Seq ASIC2-TBCD ASIC2 chr17 32501579 - TBCD chr17 80879377 + Exonic hg19 ESCA TCGA-2H-A9GJ 48 11 5'UTR-CDS Intra-chr q12 Seq+ 26815 ChimerSeq STARFusion TCGA_RNA-Seq IRF7-RCC1 IRF7 chr11 615345 - RCC1 chr1 28843237 + Exonic hg19 ESCA TCGA-2H-A9GJ 40 27 CDS-5'UTR Inter-chr Transcription factor p35.3 Seq+ 26816 ChimerSeq STARFusion TCGA_RNA-Seq TNFRSF11A-KIAA1468 TNFRSF11A chr18 59992660 + KIAA1468 chr18 59911997 + Exonic hg19 ESCA TCGA-2H-A9GJ 37 27 In-Frame Intra-chr q21.33 q21.33 Seq+ 26817 ChimerSeq STARFusion TCGA_RNA-Seq KDM4A-MPL KDM4A chr1 44169783 + MPL chr1 43805635 + Exonic hg19 ESCA TCGA-2H-A9GJ 35 9 In-Frame Intra-chr p34.2 p34.2 Oncogene Seq+ 26818 ChimerSeq STARFusion TCGA_RNA-Seq IRF7-RCC1 IRF7 chr11 615345 - RCC1 chr1 28856370 + Exonic hg19 ESCA TCGA-2H-A9GJ 28 27 CDS-5'UTR Inter-chr Transcription factor p35.3 Seq+ 26819 ChimerSeq STARFusion TCGA_RNA-Seq PITPNM3-PELP1 PITPNM3 chr17 6428676 - PELP1 chr17 4594737 - Exonic hg19 ESCA TCGA-2H-A9GJ 26 2 Out-of-frame Intra-chr p13.1 p13.2 Seq+ 26820 ChimerSeq STARFusion TCGA_RNA-Seq EPB41-POLR2L EPB41 chr1 29213722 + POLR2L chr11 840480 - Exonic hg19 ESCA TCGA-2H-A9GJ 20 14 5'UTR-CDS Inter-chr p35.3 Tumor suppressor gene p15.5 Seq+ 26821 ChimerSeq STARFusion TCGA_RNA-Seq KDM4A-MPL KDM4A chr1 44137546 + MPL chr1 43803770 + Exonic hg19 ESCA TCGA-2H-A9GJ 19 9 Out-of-frame Intra-chr p34.2 p34.2 Oncogene Seq+ 26822 ChimerSeq STARFusion TCGA_RNA-Seq AP3M2-PCAT2 AP3M2 chr8 42023078 + PCAT2 chr8 128091378 - Exonic hg19 ESCA TCGA-2H-A9GJ 19 3 Out-of-frame Intra-chr p11.21 q24.21 Seq+ 26823 ChimerSeq STARFusion TCGA_RNA-Seq ARL17A-KANSL1 ARL17A chr17 44648125 - KANSL1 chr17 44128070 - Exonic hg19 ESCA TCGA-2H-A9GJ 15 12 In-Frame Intra-chr q21.31 Seq+ 26824 ChimerSeq STARFusion TCGA_RNA-Seq DDAH2-SLC44A4 DDAH2 chr6 31697017 - SLC44A4 chr6 31833787 - Exonic hg19 ESCA TCGA-2H-A9GJ 11 28 Out-of-frame Intra-chr Seq+ 26825 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA6-LRRN2 PLEKHA6 chr1 204336927 - LRRN2 chr1 204602374 - Exonic hg19 ESCA TCGA-2H-A9GJ 11 24 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 26826 ChimerSeq STARFusion TCGA_RNA-Seq PPP4R2-KIDINS220 PPP4R2 chr3 73047309 + KIDINS220 chr2 8919944 - Exonic hg19 ESCA TCGA-2H-A9GJ 14 6 Out-of-frame Inter-chr p13 p25.1 Seq+ 26827 ChimerSeq STARFusion TCGA_RNA-Seq ASIC2-TBCD ASIC2 chr17 32501589 - TBCD chr17 80879377 + Exonic hg19 ESCA TCGA-2H-A9GJ 12 11 5'UTR-CDS Intra-chr q12 Seq+ 26828 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-SLC45A4 PTK2 chr8 141840571 - SLC45A4 chr8 142264728 - Exonic hg19 ESCA TCGA-2H-A9GJ 14 3 CDS-5'UTR Intra-chr q24.3 q24.3 Seq+ 26829 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-RIF1 TPX2 chr20 30347982 + RIF1 chr2 152315325 + Exonic hg19 ESCA TCGA-2H-A9GJ 11 3 Out-of-frame Inter-chr q11.21 q23.3 Seq+ 26830 ChimerSeq STARFusion TCGA_RNA-Seq GXYLT2-KIDINS220 GXYLT2 chr3 73047309 + KIDINS220 chr2 8919944 - Exonic hg19 ESCA TCGA-2H-A9GJ 10 6 3'UTR-CDS Inter-chr p13 p25.1 26831 ChimerSeq STARFusion TCGA_RNA-Seq KDM4A-MPL KDM4A chr1 44137546 + MPL chr1 43803791 + Exonic hg19 ESCA TCGA-2H-A9GJ 6 9 Out-of-frame Intra-chr p34.2 p34.2 Oncogene Seq+ 26832 ChimerSeq STARFusion TCGA_RNA-Seq STK10-UBTD2 STK10 chr5 171544485 - UBTD2 chr5 171661362 - Exonic hg19 ESCA TCGA-2H-A9GJ 7 5 In-Frame Intra-chr q35.1 Tumor suppressor gene q35.1 Seq+ 26833 ChimerSeq STARFusion TCGA_RNA-Seq KDM4A-MPL KDM4A chr1 44169783 + MPL chr1 43804942 + Exonic hg19 ESCA TCGA-2H-A9GJ 4 9 Out-of-frame Intra-chr p34.2 p34.2 Oncogene Seq+ 26834 ChimerSeq STARFusion TCGA_RNA-Seq SMG5-CCT3 SMG5 chr1 156228796 - CCT3 chr1 156288808 - Exonic hg19 ESCA TCGA-Z6-AAPN 284 92 In-Frame Intra-chr q22 q22 Seq+ 26835 ChimerSeq STARFusion TCGA_RNA-Seq EXT1-TSNARE1 EXT1 chr8 119122324 - TSNARE1 chr8 143293674 - Exonic hg19 ESCA TCGA-Z6-AAPN 24 6 CDS-3'UTR Intra-chr q24.11 Oncogene Tumor suppressor gene q24.3 Seq+ 26836 ChimerSeq STARFusion TCGA_RNA-Seq DIP2B-IGKC DIP2B chr12 51084877 + IGKC chr2 89161074 - Exonic hg19 ESCA TCGA-Z6-AAPN 20 0 Out-of-frame Inter-chr q13.12 p11.2 26837 ChimerSeq STARFusion TCGA_RNA-Seq DIP2B-IGKJ2 DIP2B chr12 51084878 + IGKJ2 chr2 89161073 - Exonic hg19 ESCA TCGA-Z6-AAPN 20 0 Out-of-frame Inter-chr q13.12 p11.2 26838 ChimerSeq STARFusion TCGA_RNA-Seq PMS1-RAPGEF4 PMS1 chr2 190649349 + RAPGEF4 chr2 173879192 + Exonic hg19 ESCA TCGA-Z6-AAPN 13 3 5'UTR-CDS Intra-chr q32.2 Oncogene q31.1 26839 ChimerSeq STARFusion TCGA_RNA-Seq ASAP2-CPSF3 ASAP2 chr2 9468040 + CPSF3 chr2 9568894 + Exonic hg19 ESCA TCGA-2H-A9GQ 66 31 In-Frame Intra-chr p25.1 p25.1 Seq+ 26840 ChimerSeq STARFusion TCGA_RNA-Seq EXT2-HSD17B12 EXT2 chr11 44151688 + HSD17B12 chr11 43694541 + Exonic hg19 ESCA TCGA-2H-A9GQ 50 31 CDS-5'UTR Intra-chr p11.2 Oncogene Tumor suppressor gene p11.2 26841 ChimerSeq STARFusion TCGA_RNA-Seq UHRF1BP1-ANKS1A UHRF1BP1 chr6 34825694 + ANKS1A chr6 35050468 + Exonic hg19 ESCA TCGA-2H-A9GQ 50 22 In-Frame Intra-chr p21.31 p21.31 Seq+ 26842 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R2A-DPYSL2 PPP2R2A chr8 26196503 + DPYSL2 chr8 26439485 + Exonic hg19 ESCA TCGA-2H-A9GQ 43 19 In-Frame Intra-chr p21.2 p21.2 Seq+ 26843 ChimerSeq STARFusion TCGA_RNA-Seq KLHL5-WDR19 KLHL5 chr4 39128477 + WDR19 chr4 39271596 + Exonic hg19 ESCA TCGA-2H-A9GQ 34 10 3'UTR-CDS Intra-chr p14 p14 26844 ChimerSeq STARFusion TCGA_RNA-Seq CIRH1A-SNTB2 CIRH1A chr16 69177292 + SNTB2 chr16 69304046 + Exonic hg19 ESCA TCGA-2H-A9GQ 26 14 In-Frame Intra-chr 26845 ChimerSeq STARFusion TCGA_RNA-Seq DMXL1-TNFAIP8 DMXL1 chr5 118569162 + TNFAIP8 chr5 118728511 + Exonic hg19 ESCA TCGA-2H-A9GQ 19 15 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 26846 ChimerSeq STARFusion TCGA_RNA-Seq LARP4-DIP2B LARP4 chr12 50835426 + DIP2B chr12 51019759 + Exonic hg19 ESCA TCGA-2H-A9GQ 16 11 Out-of-frame Intra-chr q13.12 q13.12 26847 ChimerSeq STARFusion TCGA_RNA-Seq NCKAP1-FRZB NCKAP1 chr2 183826887 - FRZB chr2 183723561 - Exonic hg19 ESCA TCGA-2H-A9GQ 16 7 Out-of-frame Intra-chr q32.1 q32.1 26848 ChimerSeq STARFusion TCGA_RNA-Seq RNF111-TLN2 RNF111 chr15 59280267 + TLN2 chr15 63084840 + Exonic hg19 ESCA TCGA-2H-A9GQ 15 9 5'UTR-CDS Intra-chr q22.1 Tumor suppressor gene q22.2 Seq+ 26849 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-LSM1 WHSC1L1 chr8 38239317 - LSM1 chr8 38021358 - Exonic hg19 ESCA TCGA-2H-A9GQ 15 5 5'UTR-CDS Intra-chr p11.23 Tumor suppressor gene p11.23 Seq+ 26850 ChimerSeq STARFusion TCGA_RNA-Seq PSMD1-ARMC9 PSMD1 chr2 231951895 + ARMC9 chr2 232196505 + Exonic hg19 ESCA TCGA-2H-A9GQ 13 5 Out-of-frame Intra-chr q37.1 q37.1 Seq+ 26851 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-TRAPPC9 AGO2 chr8 141645584 - TRAPPC9 chr8 141321473 - Exonic hg19 ESCA TCGA-2H-A9GQ 8 14 Out-of-frame Intra-chr q24.3 q24.3 26852 ChimerSeq STARFusion TCGA_RNA-Seq IQCH-MAP2K5 IQCH chr15 67553732 + MAP2K5 chr15 68098984 + Exonic hg19 ESCA TCGA-2H-A9GQ 10 4 In-Frame Intra-chr q23 q23 STE:STE7 Seq+ 26853 ChimerSeq STARFusion TCGA_RNA-Seq MAP4K5-L2HGDH MAP4K5 chr14 50901112 - L2HGDH chr14 50736048 - Exonic hg19 ESCA TCGA-2H-A9GQ 9 7 Out-of-frame Intra-chr q22.1 q21.3 Seq+ 26854 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-TRAPPC9 AGO2 chr8 141645584 - TRAPPC9 chr8 141034176 - Exonic hg19 ESCA TCGA-2H-A9GQ 7 14 Out-of-frame Intra-chr q24.3 q24.3 26855 ChimerSeq STARFusion TCGA_RNA-Seq ANKS1B-UHRF1BP1L ANKS1B chr12 100377882 - UHRF1BP1L chr12 100444096 - Exonic hg19 ESCA TCGA-2H-A9GQ 8 4 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 26856 ChimerSeq STARFusion TCGA_RNA-Seq NCOA7-PRELID1P1 NCOA7 chr6 126136550 + PRELID1P1 chr6 126964716 + Exonic hg19 ESCA TCGA-2H-A9GQ 8 4 Out-of-frame Intra-chr q22.31 q22.32 Seq+ 26857 ChimerSeq STARFusion TCGA_RNA-Seq MGA-MAPKBP1 MGA chr15 41962156 + MAPKBP1 chr15 42092021 + Exonic hg19 ESCA TCGA-2H-A9GQ 6 10 Out-of-frame Intra-chr q15.1 Transcription factor q15.1 Seq+ 26858 ChimerSeq STARFusion TCGA_RNA-Seq DMXL1-TNFAIP8 DMXL1 chr5 118560464 + TNFAIP8 chr5 118728511 + Exonic hg19 ESCA TCGA-2H-A9GQ 4 15 In-Frame Intra-chr q23.1 q23.1 Seq+ 26859 ChimerSeq STARFusion TCGA_RNA-Seq MBOAT2-KIDINS220 MBOAT2 chr2 9098626 - KIDINS220 chr2 8926487 - Exonic hg19 ESCA TCGA-2H-A9GQ 6 7 In-Frame Intra-chr p25.1 p25.1 26860 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-TRAPPC9 AGO2 chr8 141645584 - TRAPPC9 chr8 141263028 - Exonic hg19 ESCA TCGA-2H-A9GQ 2 14 Out-of-frame Intra-chr q24.3 q24.3 26861 ChimerSeq STARFusion TCGA_RNA-Seq RNF111-TLN2 RNF111 chr15 59296373 + TLN2 chr15 63084840 + Exonic hg19 ESCA TCGA-2H-A9GQ 2 9 5'UTR-CDS Intra-chr q22.1 Tumor suppressor gene q22.2 Seq+ 26862 ChimerSeq STARFusion TCGA_RNA-Seq BZW2-TSPAN13 BZW2 chr7 16685913 + TSPAN13 chr7 16815836 + Exonic hg19 ESCA TCGA-2H-A9GR 49 42 5'UTR-CDS Intra-chr p21.1 p21.1 Tumor suppressor gene 26863 ChimerSeq STARFusion TCGA_RNA-Seq KPNA3-EBPL KPNA3 chr13 50366574 - EBPL chr13 50243982 - Exonic hg19 ESCA TCGA-2H-A9GR 17 14 In-Frame Intra-chr q14.2 q14.2 Seq+ 26864 ChimerSeq STARFusion TCGA_RNA-Seq KPNA3-EBPL KPNA3 chr13 50366574 - EBPL chr13 50237331 - Exonic hg19 ESCA TCGA-2H-A9GR 16 14 Out-of-frame Intra-chr q14.2 q14.2 Seq+ 26865 ChimerSeq STARFusion TCGA_RNA-Seq BZW2-TSPAN13 BZW2 chr7 16685929 + TSPAN13 chr7 16815836 + Exonic hg19 ESCA TCGA-2H-A9GR 5 42 5'UTR-CDS Intra-chr p21.1 p21.1 Tumor suppressor gene 26866 ChimerSeq STARFusion TCGA_RNA-Seq KPNA3-EBPL KPNA3 chr13 50366574 - EBPL chr13 50235344 - Exonic hg19 ESCA TCGA-2H-A9GR 11 14 Out-of-frame Intra-chr q14.2 q14.2 Seq+ 26867 ChimerSeq STARFusion TCGA_RNA-Seq D2HGDH-MLPH D2HGDH chr2 242684359 + MLPH chr2 238463348 + Exonic hg19 ESCA TCGA-2H-A9GR 13 3 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 26868 ChimerSeq STARFusion TCGA_RNA-Seq ARID1A-WDTC1 ARID1A chr1 27024031 + WDTC1 chr1 27587447 + Exonic hg19 ESCA TCGA-L5-A893 17 4 CDS-5'UTR Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 Seq+ 26869 ChimerSeq STARFusion TCGA_RNA-Seq MAP1S-CEACAM6 MAP1S chr19 17835017 + CEACAM6 chr19 42270091 + Exonic hg19 ESCA TCGA-L5-A891 953 759 Out-of-frame Intra-chr p13.11 q13.2 Seq+ 26870 ChimerSeq STARFusion TCGA_RNA-Seq OTUB1-COX8A OTUB1 chr11 63756224 + COX8A chr11 63743697 + Exonic hg19 ESCA TCGA-L5-A891 648 227 In-Frame Intra-chr q13.1 q13.1 Seq+ 26871 ChimerSeq STARFusion TCGA_RNA-Seq MAP1S-CEACAM6 MAP1S chr19 17831846 + CEACAM6 chr19 42270091 + Exonic hg19 ESCA TCGA-L5-A891 398 750 In-Frame Intra-chr p13.11 q13.2 Seq+ 26872 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 125051854 - SCARB1 chr12 125302253 - Exonic hg19 ESCA TCGA-L5-A891 296 316 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 26873 ChimerSeq STARFusion TCGA_RNA-Seq ARID3A-PRPF31 ARID3A chr19 932742 + PRPF31 chr19 54634738 + Exonic hg19 ESCA TCGA-L5-A891 299 142 In-Frame Intra-chr p13.3 Transcription factor Seq+ 26874 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 124907047 - SCARB1 chr12 125279814 - Exonic hg19 ESCA TCGA-L5-A891 214 316 In-Frame Intra-chr q24.31 q24.31 Seq+ 26875 ChimerSeq STARFusion TCGA_RNA-Seq FBXO46-ZNF90 FBXO46 chr19 46234107 - ZNF90 chr19 20216030 + Exonic hg19 ESCA TCGA-L5-A891 218 12 5'UTR-CDS Intra-chr q13.32 p12 Transcription factor Seq+ 26876 ChimerSeq STARFusion TCGA_RNA-Seq B9D2-REEP6 B9D2 chr19 41869337 - REEP6 chr19 1495293 + Exonic hg19 ESCA TCGA-L5-A891 120 63 In-Frame Intra-chr q13.2 p13.3 Seq+ 26877 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB21-TFF1 ZBTB21 chr21 43423006 - TFF1 chr21 43783516 - Exonic hg19 ESCA TCGA-L5-A891 54 114 Out-of-frame Intra-chr q22.3 Transcription factor q22.3 Seq+ 26878 ChimerSeq STARFusion TCGA_RNA-Seq PRKD2-KLHL26 PRKD2 chr19 47204056 - KLHL26 chr19 18778474 + Exonic hg19 ESCA TCGA-L5-A891 71 35 In-Frame Intra-chr q13.32 p13.11 Seq+ 26879 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB21-TFF1 ZBTB21 chr21 43430361 - TFF1 chr21 43783516 - Exonic hg19 ESCA TCGA-L5-A891 45 114 Out-of-frame Intra-chr q22.3 Transcription factor q22.3 Seq+ 26880 ChimerSeq STARFusion TCGA_RNA-Seq DAZAP1-ZNF226 DAZAP1 chr19 1422395 + ZNF226 chr19 44679137 + Exonic hg19 ESCA TCGA-L5-A891 59 29 In-Frame Intra-chr p13.3 q13.31 Transcription factor Seq+ 26881 ChimerSeq STARFusion TCGA_RNA-Seq LAMA5-OR7E28P LAMA5 chr20 60926760 - OR7E28P chr2 159718918 + Exonic hg19 ESCA TCGA-L5-A891 55 19 Out-of-frame Inter-chr q13.33 q24.1 Seq+ 26882 ChimerSeq STARFusion TCGA_RNA-Seq CARM1-PLA2G4C CARM1 chr19 10982598 + PLA2G4C chr19 48558306 - Exonic hg19 ESCA TCGA-L5-A891 47 41 Out-of-frame Intra-chr p13.2 q13.33 Seq+ 26883 ChimerSeq STARFusion TCGA_RNA-Seq LAMA5-DAPL1 LAMA5 chr20 60926760 - DAPL1 chr2 159718918 + Exonic hg19 ESCA TCGA-L5-A891 49 19 CDS-3'UTR Inter-chr q13.33 q24.1 Seq+ 26884 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB21-TFF1 ZBTB21 chr21 43422459 - TFF1 chr21 43783516 - Exonic hg19 ESCA TCGA-L5-A891 14 114 Out-of-frame Intra-chr q22.3 Transcription factor q22.3 Seq+ 26885 ChimerSeq STARFusion TCGA_RNA-Seq SUPT5H-ZSCAN5A SUPT5H chr19 39966953 + ZSCAN5A chr19 56736417 - Exonic hg19 ESCA TCGA-L5-A891 37 19 Out-of-frame Intra-chr q13.2 q13.43 Transcription factor Seq+ 26886 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB1-TRPM4 DNAJB1 chr19 14638499 - TRPM4 chr19 49703557 + Exonic hg19 ESCA TCGA-L5-A891 33 9 5'UTR-CDS Intra-chr p13.12 Tumor suppressor gene q13.33 Seq+ 26887 ChimerSeq STARFusion TCGA_RNA-Seq GIPR-RBM42 GIPR chr19 46173992 + RBM42 chr19 36128060 + Exonic hg19 ESCA TCGA-L5-A891 27 16 In-Frame Intra-chr q13.32 q13.12 Seq+ 26888 ChimerSeq STARFusion TCGA_RNA-Seq ZNF542-ANGPTL6 ZNF542 chr19 56880305 + ANGPTL6 chr19 10205614 - Exonic hg19 ESCA TCGA-L5-A891 27 16 5'UTR-CDS Intra-chr p13.2 Seq+ 26889 ChimerSeq STARFusion TCGA_RNA-Seq OLA1-GPR155 OLA1 chr2 175087761 - GPR155 chr2 175326400 - Exonic hg19 ESCA TCGA-L5-A891 24 16 In-Frame Intra-chr q31.1 q31.1 Seq+ 26890 ChimerSeq STARFusion TCGA_RNA-Seq PIP5K1B-PGM5 PIP5K1B chr9 71491710 + PGM5 chr9 71094334 + Exonic hg19 ESCA TCGA-L5-A891 18 7 Out-of-frame Intra-chr q21.11 q21.11 Seq+ 26891 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-FGR WASF2 chr1 27816497 - FGR chr1 27951662 - Exonic hg19 ESCA TCGA-L5-A891 15 11 5'UTR-5'UTR Intra-chr p36.11 p35.3 TK:Src Seq+ 26892 ChimerSeq STARFusion TCGA_RNA-Seq EVI5L-PTPRS EVI5L chr19 7915008 + PTPRS chr19 5225855 - Exonic hg19 ESCA TCGA-L5-A891 17 2 In-Frame Intra-chr p13.2 p13.3 Seq+ 26893 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM4-JAK3 R3HDM4 chr19 913087 - JAK3 chr19 17953981 - Exonic hg19 ESCA TCGA-L5-A891 14 14 Out-of-frame Intra-chr p13.3 p13.11 TK:JakA Oncogene Seq+ 26894 ChimerSeq STARFusion TCGA_RNA-Seq CARM1-PLA2G4C CARM1 chr19 10982598 + PLA2G4C chr19 48551645 - Exonic hg19 ESCA TCGA-L5-A891 7 41 Out-of-frame Intra-chr p13.2 q13.33 Seq+ 26895 ChimerSeq STARFusion TCGA_RNA-Seq LSR-NLRP2 LSR chr19 35741562 + NLRP2 chr19 55481367 + Exonic hg19 ESCA TCGA-L5-A891 14 10 CDS-5'UTR Intra-chr q13.12 Seq+ 26896 ChimerSeq STARFusion TCGA_RNA-Seq ASXL1-TPX2 ASXL1 chr20 30956926 + TPX2 chr20 30359363 + Exonic hg19 ESCA TCGA-L5-A891 14 6 Out-of-frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 26897 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983374 - RSRC2 chr12 122995735 - Exonic hg19 ESCA TCGA-L5-A891 14 6 In-Frame Intra-chr q24.31 q24.31 Seq+ 26898 ChimerSeq STARFusion TCGA_RNA-Seq ZNF417-CNFN ZNF417 chr19 58427747 - CNFN chr19 42893191 - Exonic hg19 ESCA TCGA-L5-A891 14 5 CDS-5'UTR Intra-chr q13.43 Transcription factor q13.2 Seq+ 26899 ChimerSeq STARFusion TCGA_RNA-Seq TJP2-PIP5K1B TJP2 chr9 71736637 + PIP5K1B chr9 71555558 + Exonic hg19 ESCA TCGA-L5-A891 12 11 Out-of-frame Intra-chr q21.11 q21.11 26900 ChimerSeq STARFusion TCGA_RNA-Seq ANLN-SEPT7 ANLN chr7 36439002 + SEPT7 chr7 35903162 + Exonic hg19 ESCA TCGA-L5-A891 14 2 In-Frame Intra-chr p14.2 p14.2 26901 ChimerSeq STARFusion TCGA_RNA-Seq PTPRS-MBD3 PTPRS chr19 5211601 - MBD3 chr19 1582711 - Exonic hg19 ESCA TCGA-L5-A891 13 6 Out-of-frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 26902 ChimerSeq STARFusion TCGA_RNA-Seq PTPRS-UQCR11 PTPRS chr19 5211601 - UQCR11 chr19 1582711 - Exonic hg19 ESCA TCGA-L5-A891 13 6 CDS-3'UTR Intra-chr p13.3 p13.3 26903 ChimerSeq STARFusion TCGA_RNA-Seq PXN-PLA2G1B PXN chr12 120703420 - PLA2G1B chr12 120763823 - Exonic hg19 ESCA TCGA-L5-A891 10 18 In-Frame Intra-chr q24.23 q24.31 Seq+ 26904 ChimerSeq STARFusion TCGA_RNA-Seq ELL-MKNK2 ELL chr19 18569015 - MKNK2 chr19 2046690 - Exonic hg19 ESCA TCGA-L5-A891 13 4 Out-of-frame Intra-chr p13.11 p13.3 Seq+ 26905 ChimerSeq STARFusion TCGA_RNA-Seq SNX8-MAD1L1 SNX8 chr7 2353963 - MAD1L1 chr7 2054277 - Exonic hg19 ESCA TCGA-L5-A891 10 8 Out-of-frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 26906 ChimerSeq STARFusion TCGA_RNA-Seq PROSC-TTLL10 PROSC chr8 37633534 + TTLL10 chr1 1114569 + Exonic hg19 ESCA TCGA-L5-A891 11 3 CDS-5'UTR Inter-chr p36.33 Seq+ 26907 ChimerSeq STARFusion TCGA_RNA-Seq TJP2-PIP5K1B TJP2 chr9 71736639 + PIP5K1B chr9 71606054 + Exonic hg19 ESCA TCGA-L5-A891 9 11 Out-of-frame Intra-chr q21.11 q21.11 26908 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-FGR WASF2 chr1 27816497 - FGR chr1 27967635 - Exonic hg19 ESCA TCGA-L5-A891 9 11 5'UTR-5'UTR Intra-chr p36.11 p35.3 TK:Src Seq+ 26909 ChimerSeq STARFusion TCGA_RNA-Seq HKR1-CEACAM7 HKR1 chr19 37838774 + CEACAM7 chr19 42191152 - Exonic hg19 ESCA TCGA-L5-A891 10 6 In-Frame Intra-chr q13.12 Transcription factor Seq+ 26910 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D15-LGR5 TBC1D15 chr12 72266783 + LGR5 chr12 71971705 + Exonic hg19 ESCA TCGA-L5-A891 11 2 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 26911 ChimerSeq STARFusion TCGA_RNA-Seq ZNF541-C19orf68 ZNF541 chr19 48047383 - C19orf68 chr19 48697910 + Exonic hg19 ESCA TCGA-L5-A891 10 6 Out-of-frame Intra-chr q13.33 Transcription factor q13.33 Seq+ 26912 ChimerSeq STARFusion TCGA_RNA-Seq ZNF562-HK2 ZNF562 chr19 9768685 - HK2 chr2 75099427 + Exonic hg19 ESCA TCGA-L5-A891 10 6 Out-of-frame Inter-chr p13.2 Transcription factor p12 26913 ChimerSeq STARFusion TCGA_RNA-Seq LPHN1-LGALS4 LPHN1 chr19 14281519 - LGALS4 chr19 39303781 - Exonic hg19 ESCA TCGA-L5-A891 10 4 Out-of-frame Intra-chr Seq+ 26914 ChimerSeq STARFusion TCGA_RNA-Seq LAMA5-DAPL1 LAMA5 chr20 60926760 - DAPL1 chr2 159718921 + Exonic hg19 ESCA TCGA-L5-A891 6 16 CDS-3'UTR Inter-chr q13.33 q24.1 Seq+ 26915 ChimerSeq STARFusion TCGA_RNA-Seq HK2-ZNF121 HK2 chr2 75101576 + ZNF121 chr19 9679758 - Exonic hg19 ESCA TCGA-L5-A891 8 6 CDS-5'UTR Inter-chr p12 p13.2 Transcription factor Seq+ 26916 ChimerSeq STARFusion TCGA_RNA-Seq KLF9-FOXRED2 KLF9 chr9 73027775 - FOXRED2 chr22 36889850 - Exonic hg19 ESCA TCGA-L5-A891 9 2 5'UTR-CDS Inter-chr q21.12 Transcription factor q12.3 Seq+ 26917 ChimerSeq STARFusion TCGA_RNA-Seq ZNF790-C19orf45 ZNF790 chr19 37340904 - C19orf45 chr19 7570210 + Exonic hg19 ESCA TCGA-L5-A891 8 6 5'UTR-CDS Intra-chr q13.12 Transcription factor Seq+ 26918 ChimerSeq STARFusion TCGA_RNA-Seq CCAT1-CASC8 CCAT1 chr8 128231055 - CASC8 chr8 128302305 - Exonic hg19 ESCA TCGA-L5-A891 8 5 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 26919 ChimerSeq STARFusion TCGA_RNA-Seq OLA1-GPR155 OLA1 chr2 175087761 - GPR155 chr2 175326220 - Exonic hg19 ESCA TCGA-L5-A891 6 10 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 26920 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM4-JAK3 R3HDM4 chr19 913087 - JAK3 chr19 17954266 - Exonic hg19 ESCA TCGA-L5-A891 5 14 In-Frame Intra-chr p13.3 p13.11 TK:JakA Oncogene Seq+ 26921 ChimerSeq STARFusion TCGA_RNA-Seq NCOA7-NKAIN2 NCOA7 chr6 126112213 + NKAIN2 chr6 125112485 + Exonic hg19 ESCA TCGA-L5-A891 6 9 5'UTR-CDS Intra-chr q22.31 q22.31 Seq+ 26922 ChimerSeq STARFusion TCGA_RNA-Seq OLA1-GPR155 OLA1 chr2 175087761 - GPR155 chr2 175318569 - Exonic hg19 ESCA TCGA-L5-A891 4 16 In-Frame Intra-chr q31.1 q31.1 Seq+ 26923 ChimerSeq STARFusion TCGA_RNA-Seq R3HCC1-GRIK5 R3HCC1 chr8 23147982 + GRIK5 chr19 42526506 - Exonic hg19 ESCA TCGA-L5-A891 6 7 In-Frame Inter-chr p21.3 q13.2 Seq+ 26924 ChimerSeq STARFusion TCGA_RNA-Seq ZNF542-ANGPTL6 ZNF542 chr19 56880706 + ANGPTL6 chr19 10205614 - Exonic hg19 ESCA TCGA-L5-A891 4 15 5'UTR-CDS Intra-chr p13.2 Seq+ 26925 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R13L-MBOAT7 PPP1R13L chr19 45885785 - MBOAT7 chr19 54678125 - Exonic hg19 ESCA TCGA-L5-A891 5 8 Out-of-frame Intra-chr q13.32 Seq+ 26926 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB1-TRPM4 DNAJB1 chr19 14638538 - TRPM4 chr19 49703557 + Exonic hg19 ESCA TCGA-L5-A891 4 9 5'UTR-CDS Intra-chr p13.12 Tumor suppressor gene q13.33 Seq+ 26927 ChimerSeq STARFusion TCGA_RNA-Seq NCOA7-NKAIN2 NCOA7 chr6 126107359 + NKAIN2 chr6 125112485 + Exonic hg19 ESCA TCGA-L5-A891 4 9 5'UTR-CDS Intra-chr q22.31 q22.31 Seq+ 26928 ChimerSeq STARFusion TCGA_RNA-Seq ZNF614-FXYD5 ZNF614 chr19 52518896 - FXYD5 chr19 35660469 + Exonic hg19 ESCA TCGA-L5-A891 4 7 3'UTR-CDS Intra-chr q13.41 Transcription factor q13.12 Seq+ 26929 ChimerSeq STARFusion TCGA_RNA-Seq OLA1-GPR155 OLA1 chr2 175087761 - GPR155 chr2 175324816 - Exonic hg19 ESCA TCGA-L5-A891 3 10 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 26930 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57886157 + Exonic hg19 ESCA TCGA-LN-A8HZ 34 6 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 26931 ChimerSeq STARFusion TCGA_RNA-Seq WWP2-GSG1L WWP2 chr16 69833198 + GSG1L chr16 27856382 - Exonic hg19 ESCA TCGA-LN-A8HZ 20 7 In-Frame Intra-chr q22.1 p12.1 Seq+ 26932 ChimerSeq STARFusion TCGA_RNA-Seq FAM131B-GIPC1 FAM131B chr7 143059852 - GIPC1 chr19 14603726 - Exonic hg19 ESCA TCGA-LN-A8HZ 17 0 Out-of-frame Inter-chr q34 p13.12 26933 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-PHF12 FAM222B chr17 27169700 - PHF12 chr17 27235899 - Exonic hg19 ESCA TCGA-LN-A8HZ 7 8 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 26934 ChimerSeq STARFusion TCGA_RNA-Seq ME1-UBE3D ME1 chr6 84108086 - UBE3D chr6 83667169 - Exonic hg19 ESCA TCGA-VR-A8EO 29 14 In-Frame Intra-chr q14.2 q14.1 Seq+ 26935 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-CISD2 CTTN chr11 70263229 + CISD2 chr4 103808498 + Exonic hg19 ESCA TCGA-IG-A3Y9 52 5 Out-of-frame Inter-chr q13.3 q24 Seq+ 26936 ChimerSeq STARFusion TCGA_RNA-Seq CPT1A-PPFIA1 CPT1A chr11 68552283 - PPFIA1 chr11 70194295 + Exonic hg19 ESCA TCGA-L5-A43H 56 5 In-Frame Intra-chr q13.3 q13.3 Seq+ 26937 ChimerSeq STARFusion TCGA_RNA-Seq TBL1X-SHROOM2 TBL1X chrX 9622362 + SHROOM2 chrX 9841692 + Exonic hg19 ESCA TCGA-L5-A43H 29 4 Out-of-frame Intra-chr p22.31 p22.2 Seq+ 26938 ChimerSeq STARFusion TCGA_RNA-Seq FDFT1-YWHAZ FDFT1 chr8 11683724 + YWHAZ chr8 101937267 - Exonic hg19 ESCA TCGA-L5-A43I 251 28 In-Frame Intra-chr p23.1 q22.3 Seq+ 26939 ChimerSeq STARFusion TCGA_RNA-Seq NADSYN1-SPAG9 NADSYN1 chr11 71193071 + SPAG9 chr17 49048217 - Exonic hg19 ESCA TCGA-L5-A43I 28 4 In-Frame Inter-chr q13.4 q21.33 Seq+ 26940 ChimerSeq STARFusion TCGA_RNA-Seq NEMF-SOS2 NEMF chr14 50280706 - SOS2 chr14 50612314 - Exonic hg19 ESCA TCGA-L5-A43I 25 3 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 26941 ChimerSeq STARFusion TCGA_RNA-Seq DNMT1-OLFM2 DNMT1 chr19 10246412 - OLFM2 chr19 9968537 - Exonic hg19 ESCA TCGA-L5-A43I 24 5 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene Transcription factor p13.2 Seq+ 26942 ChimerSeq STARFusion TCGA_RNA-Seq RHPN2-CLASRP RHPN2 chr19 33517410 - CLASRP chr19 45573795 + Exonic hg19 ESCA TCGA-L5-A43I 22 3 Out-of-frame Intra-chr q13.11 q13.32 Seq+ 26943 ChimerSeq STARFusion TCGA_RNA-Seq ZMYM2-LATS2 ZMYM2 chr13 20534166 + LATS2 chr13 21620369 - Exonic hg19 ESCA TCGA-L5-A43I 14 2 5'UTR-5'UTR Intra-chr q12.11 q12.11 AGC:NDR Tumor suppressor gene Seq+ 26944 ChimerSeq STARFusion TCGA_RNA-Seq TMEM171-TNPO1 TMEM171 chr5 72416523 + TNPO1 chr5 72185613 + Exonic hg19 ESCA TCGA-L5-A43I 13 1 5'UTR-CDS Intra-chr q13.2 q13.2 26945 ChimerSeq STARFusion TCGA_RNA-Seq PPP5C-AP2S1 PPP5C chr19 46857246 + AP2S1 chr19 47349399 - Exonic hg19 ESCA TCGA-L5-A43J 101 19 In-Frame Intra-chr q13.32 q13.32 Seq+ 26946 ChimerSeq STARFusion TCGA_RNA-Seq PPP5C-AP2S1 PPP5C chr19 46857246 + AP2S1 chr19 47342835 - Exonic hg19 ESCA TCGA-L5-A43J 20 19 In-Frame Intra-chr q13.32 q13.32 Seq+ 26947 ChimerSeq STARFusion TCGA_RNA-Seq PIN1-PDE4C PIN1 chr19 9949324 + PDE4C chr19 18344210 - Exonic hg19 ESCA TCGA-L5-A43J 20 3 5'UTR-5'UTR Intra-chr p13.2 Tumor suppressor gene Transcription factor p13.11 Seq+ 26948 ChimerSeq STARFusion TCGA_RNA-Seq PDE4D-DEPDC1B PDE4D chr5 59064073 - DEPDC1B chr5 59983054 - Exonic hg19 ESCA TCGA-L5-A43J 13 2 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 26949 ChimerSeq STARFusion TCGA_RNA-Seq NPAS2-PACSIN2 NPAS2 chr2 101521248 + PACSIN2 chr22 43284804 - Exonic hg19 ESCA TCGA-VR-A8EY 60 28 Out-of-frame Inter-chr q11.2 Tumor suppressor gene Transcription factor q13.2 Seq+ 26950 ChimerSeq STARFusion TCGA_RNA-Seq ERBB3-EGFR ERBB3 chr12 56492359 + EGFR chr7 55266410 + Exonic hg19 ESCA TCGA-VR-A8EY 19 0 In-Frame Inter-chr q13.2 Oncogene p11.2 TK:EGFR Oncogene 26951 ChimerSeq STARFusion TCGA_RNA-Seq KIF18B-C17orf104 KIF18B chr17 43010280 - C17orf104 chr17 42734495 + Exonic hg19 ESCA TCGA-VR-A8EY 15 6 In-Frame Intra-chr q21.31 Seq+ 26952 ChimerSeq STARFusion TCGA_RNA-Seq ADIPOR2-CASK ADIPOR2 chr12 1800379 + CASK chrX 41383287 - Exonic hg19 ESCA TCGA-L5-A43M 180 18 5'UTR-CDS Inter-chr p13.33 p11.4 CAMK:CASK Seq+ 26953 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 125020111 - SCARB1 chr12 125302253 - Exonic hg19 ESCA TCGA-L5-A43M 176 25 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 26954 ChimerSeq STARFusion TCGA_RNA-Seq ADIPOR2-CASK ADIPOR2 chr12 1800357 + CASK chrX 41383287 - Exonic hg19 ESCA TCGA-L5-A43M 81 18 5'UTR-CDS Inter-chr p13.33 p11.4 CAMK:CASK Seq+ 26955 ChimerSeq STARFusion TCGA_RNA-Seq SMAGP-TBC1D30 SMAGP chr12 51663029 - TBC1D30 chr12 65237160 + Exonic hg19 ESCA TCGA-L5-A43M 50 10 Out-of-frame Intra-chr q13.13 q14.3 Seq+ 26956 ChimerSeq STARFusion TCGA_RNA-Seq ADIPOR2-CASK ADIPOR2 chr12 1812148 + CASK chrX 41383287 - Exonic hg19 ESCA TCGA-L5-A43M 42 18 5'UTR-CDS Inter-chr p13.33 p11.4 CAMK:CASK Seq+ 26957 ChimerSeq STARFusion TCGA_RNA-Seq PDGFA-PRKAR1B PDGFA chr7 550446 - PRKAR1B chr7 619014 - Exonic hg19 ESCA TCGA-L5-A43M 42 4 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 26958 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 125051854 - SCARB1 chr12 125302253 - Exonic hg19 ESCA TCGA-L5-A43M 30 25 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 26959 ChimerSeq STARFusion TCGA_RNA-Seq ASXL2-HADHA ASXL2 chr2 26101035 - HADHA chr2 26432758 - Exonic hg19 ESCA TCGA-L5-A43M 28 3 In-Frame Intra-chr p23.3 p23.3 Seq+ 26960 ChimerSeq STARFusion TCGA_RNA-Seq ERN1-MYCBPAP ERN1 chr17 62152535 - MYCBPAP chr17 48594654 + Exonic hg19 ESCA TCGA-L5-A43M 26 4 Out-of-frame Intra-chr q23.3 q21.33 Seq+ 26961 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-MAGEB16 CTDSP2 chr12 58240155 - MAGEB16 chrX 35820248 + Exonic hg19 ESCA TCGA-L5-A43M 25 4 CDS-5'UTR Inter-chr q14.1 p21.1 Seq+ 26962 ChimerSeq STARFusion TCGA_RNA-Seq GPC1-RPL28 GPC1 chr2 241392439 + RPL28 chr19 55897716 + Exonic hg19 ESCA TCGA-L5-A43M 19 0 Out-of-frame Inter-chr q37.3 q13.42 26963 ChimerSeq STARFusion TCGA_RNA-Seq TMBIM4-LYZ TMBIM4 chr12 66531469 - LYZ chr12 69747551 + Exonic hg19 ESCA TCGA-L5-A43M 14 4 Out-of-frame Intra-chr q14.3 q15 26964 ChimerSeq STARFusion TCGA_RNA-Seq PDIA3-MFAP1 PDIA3 chr15 44063656 + MFAP1 chr15 44102073 - Exonic hg19 ESCA TCGA-L5-A43M 12 3 Out-of-frame Intra-chr q15.3 q15.3 Seq+ 26965 ChimerSeq STARFusion TCGA_RNA-Seq CADM4-SMG9 CADM4 chr19 44143879 - SMG9 chr19 44254899 - Exonic hg19 ESCA TCGA-L5-A43M 10 6 CDS-5'UTR Intra-chr q13.31 Tumor suppressor gene q13.31 Seq+ 26966 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-DCUN1D1 TBL1XR1 chr3 176914909 - DCUN1D1 chr3 182683541 - Exonic hg19 ESCA TCGA-LN-A8I1 54 17 5'UTR-CDS Intra-chr q26.32 q26.33 Oncogene Seq+ 26967 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469662 + FTH1P27 chrX 37364954 + Exonic hg19 ESCA TCGA-LN-A8I1 33 0 Out-of-frame Inter-chr q13.33 p21.1 26968 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-MCF2L2 TBL1XR1 chr3 176914909 - MCF2L2 chr3 183107567 - Exonic hg19 ESCA TCGA-LN-A8I1 30 11 5'UTR-CDS Intra-chr q26.32 q27.1 Seq+ 26969 ChimerSeq STARFusion TCGA_RNA-Seq JPX-GAGE1 JPX chrX 73164497 + GAGE1 chrX 49364770 + Exonic hg19 ESCA TCGA-LN-A8I1 18 0 5'UTR-5'UTR Intra-chr q13.2 p11.23 26970 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-DCUN1D1 TBL1XR1 chr3 176914128 - DCUN1D1 chr3 182683541 - Exonic hg19 ESCA TCGA-LN-A8I1 7 17 5'UTR-CDS Intra-chr q26.32 q26.33 Oncogene Seq+ 26971 ChimerSeq STARFusion TCGA_RNA-Seq SPTBN2-PC SPTBN2 chr11 66488555 - PC chr11 66639630 - Exonic hg19 ESCA TCGA-LN-A8I1 10 3 CDS-5'UTR Intra-chr q13.2 q13.2 Seq+ 26972 ChimerSeq STARFusion TCGA_RNA-Seq CDIPT-SEZ6L2 CDIPT chr16 29871902 - SEZ6L2 chr16 29885050 - Exonic hg19 ESCA TCGA-LN-A8I0 19 5 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 26973 ChimerSeq STARFusion TCGA_RNA-Seq VCL-ADK VCL chr10 75867112 + ADK chr10 76468079 + Exonic hg19 ESCA TCGA-VR-A8ET 107 21 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 26974 ChimerSeq STARFusion TCGA_RNA-Seq YWHAB-STK4 YWHAB chr20 43514527 + STK4 chr20 43703659 + Exonic hg19 ESCA TCGA-VR-A8ET 40 5 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 26975 ChimerSeq STARFusion TCGA_RNA-Seq TBK1-RBM48 TBK1 chr12 64889555 + RBM48 chr7 92161718 + Exonic hg19 ESCA TCGA-VR-A8ET 37 5 Out-of-frame Inter-chr q14.2 Other:IKK q21.2 Seq+ 26976 ChimerSeq STARFusion TCGA_RNA-Seq LYRM4-RPP40 LYRM4 chr6 5216851 - RPP40 chr6 5002479 - Exonic hg19 ESCA TCGA-VR-A8ET 30 1 In-Frame Intra-chr p25.1 p25.1 Seq+ 26977 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-PHTF2 PTPN12 chr7 77221573 + PHTF2 chr7 77469538 + Exonic hg19 ESCA TCGA-VR-A8ET 16 3 CDS-5'UTR Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 26978 ChimerSeq STARFusion TCGA_RNA-Seq S100A9-KRT17 S100A9 chr1 153333413 + KRT17 chr17 39780390 - Exonic hg19 ESCA TCGA-VR-A8ET 10 9 Out-of-frame Inter-chr q21.3 q21.2 26979 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA4 LIPF chr10 90438256 + PGA4 chr11 61018857 + Exonic hg19 ESCA TCGA-L5-A43C 24 183 Out-of-frame Inter-chr q23.31 q12.2 26980 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA5 LIPF chr10 90438256 + PGA5 chr11 61018857 + Exonic hg19 ESCA TCGA-L5-A43C 24 161 Out-of-frame Inter-chr q23.31 q12.2 26981 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA4 LIPF chr10 90429618 + PGA4 chr11 60989825 + Exonic hg19 ESCA TCGA-L5-A43C 15 170 Out-of-frame Inter-chr q23.31 q12.2 26982 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA5 LIPF chr10 90429618 + PGA5 chr11 61008651 + Exonic hg19 ESCA TCGA-L5-A43C 15 161 Out-of-frame Inter-chr q23.31 q12.2 26983 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA4 LIPF chr10 90438248 + PGA4 chr11 60999099 + Exonic hg19 ESCA TCGA-L5-A43C 8 183 Out-of-frame Inter-chr q23.31 q12.2 26984 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA4 LIPF chr10 90429623 + PGA4 chr11 60970994 + Exonic hg19 ESCA TCGA-L5-A43C 6 182 Out-of-frame Inter-chr q23.31 q12.2 26985 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA4 LIPF chr10 90436038 + PGA4 chr11 61017222 + Exonic hg19 ESCA TCGA-L5-A43C 3 182 Out-of-frame Inter-chr q23.31 q12.2 26986 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA5 LIPF chr10 90429696 + PGA5 chr11 61008652 + Exonic hg19 ESCA TCGA-L5-A43C 5 160 Out-of-frame Inter-chr q23.31 q12.2 26987 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA5 LIPF chr10 90429623 + PGA5 chr11 60989830 + Exonic hg19 ESCA TCGA-L5-A43C 4 161 Out-of-frame Inter-chr q23.31 q12.2 26988 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA5 LIPF chr10 90429623 + PGA5 chr11 60970994 + Exonic hg19 ESCA TCGA-L5-A43C 3 161 Out-of-frame Inter-chr q23.31 q12.2 26989 ChimerSeq STARFusion TCGA_RNA-Seq PGA4-LIPF PGA4 chr11 60997697 + LIPF chr10 90438381 + Exonic hg19 ESCA TCGA-L5-A43C 4 144 Out-of-frame Inter-chr q12.2 q23.31 26990 ChimerSeq STARFusion TCGA_RNA-Seq PGA4-LIPF PGA4 chr11 60993853 + LIPF chr10 90424220 + Exonic hg19 ESCA TCGA-L5-A43C 3 142 Out-of-frame Inter-chr q12.2 q23.31 26991 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGC LIPF chr10 90438318 + PGC chr6 41704561 - Exonic hg19 ESCA TCGA-L5-A43C 3 92 Out-of-frame Inter-chr q23.31 p21.1 26992 ChimerSeq STARFusion TCGA_RNA-Seq PGA3-MTATP6P1 PGA3 chr11 60974097 + MTATP6P1 chr1 569353 + Exonic hg19 ESCA TCGA-L5-A43C 14 14 Out-of-frame Inter-chr q12.2 p36.33 26993 ChimerSeq STARFusion TCGA_RNA-Seq SETD1A-PGA3 SETD1A chr16 30982761 + PGA3 chr11 60978810 + Exonic hg19 ESCA TCGA-L5-A43C 17 1 Out-of-frame Inter-chr p11.2 q12.2 26994 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA5 LIPF chr10 90428393 + PGA5 chr11 61008661 + Exonic hg19 ESCA TCGA-L5-A43C 4 39 Out-of-frame Inter-chr q23.31 q12.2 26995 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA5 LIPF chr10 90429616 + PGA5 chr11 60970987 + Exonic hg19 ESCA TCGA-L5-A43C 4 39 Out-of-frame Inter-chr q23.31 q12.2 26996 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA5 LIPF chr10 90436038 + PGA5 chr11 61017222 + Exonic hg19 ESCA TCGA-L5-A43C 3 39 Out-of-frame Inter-chr q23.31 q12.2 26997 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA5 LIPF chr10 90436037 + PGA5 chr11 61009383 + Exonic hg19 ESCA TCGA-L5-A43C 3 39 Out-of-frame Inter-chr q23.31 q12.2 26998 ChimerSeq STARFusion TCGA_RNA-Seq PGA3-MTATP6P1 PGA3 chr11 60975005 + MTATP6P1 chr1 569356 + Exonic hg19 ESCA TCGA-L5-A43C 7 14 Out-of-frame Inter-chr q12.2 p36.33 26999 ChimerSeq STARFusion TCGA_RNA-Seq B2M-PGA5 B2M chr15 45008340 + PGA5 chr11 61011637 + Exonic hg19 ESCA TCGA-L5-A43C 8 4 Out-of-frame Inter-chr Oncogene q12.2 27000 ChimerSeq STARFusion TCGA_RNA-Seq PGA3-MTATP6P1 PGA3 chr11 60974989 + MTATP6P1 chr1 569380 + Exonic hg19 ESCA TCGA-L5-A43C 3 14 Out-of-frame Inter-chr q12.2 p36.33 27001 ChimerSeq STARFusion TCGA_RNA-Seq RALGAPB-KCNB1 RALGAPB chr20 37128276 + KCNB1 chr20 47991529 - Exonic hg19 ESCA TCGA-VR-A8EQ 87 20 Out-of-frame Intra-chr q11.23 q13.13 Seq+ 27002 ChimerSeq STARFusion TCGA_RNA-Seq FAM131B-GIPC1 FAM131B chr7 143059852 - GIPC1 chr19 14603726 - Exonic hg19 ESCA TCGA-VR-A8EQ 19 0 Out-of-frame Inter-chr q34 p13.12 27003 ChimerSeq STARFusion TCGA_RNA-Seq TIMM22-SGSM2 TIMM22 chr17 900473 + SGSM2 chr17 2279391 + Exonic hg19 ESCA TCGA-VR-A8EQ 15 13 Out-of-frame Intra-chr p13.3 Transcription factor Seq+ 27004 ChimerSeq STARFusion TCGA_RNA-Seq REG1A-DDX52 REG1A chr2 79350526 + DDX52 chr17 35985986 - Exonic hg19 ESCA TCGA-VR-A8EQ 17 0 Out-of-frame Inter-chr p12 q12 27005 ChimerSeq STARFusion TCGA_RNA-Seq LDLRAD4-ANKRD12 LDLRAD4 chr18 13438383 + ANKRD12 chr18 9208655 + Exonic hg19 ESCA TCGA-VR-A8EQ 11 4 Out-of-frame Intra-chr p11.21 p11.22 27006 ChimerSeq STARFusion TCGA_RNA-Seq ST13-ST8SIA3 ST13 chr22 41244298 - ST8SIA3 chr18 55019707 + Exonic hg19 ESCA TCGA-L5-A43E 39 7 CDS-5'UTR Inter-chr q13.2 Tumor suppressor gene q21.31 Seq+ 27007 ChimerSeq STARFusion TCGA_RNA-Seq GLRX3-SGMS1 GLRX3 chr10 131934776 + SGMS1 chr10 52279681 - Exonic hg19 ESCA TCGA-L5-A43E 18 10 CDS-5'UTR Intra-chr q26.3 q11.23 Tumor suppressor gene Seq+ 27008 ChimerSeq STARFusion TCGA_RNA-Seq IFT80-TNIK IFT80 chr3 160116934 - TNIK chr3 170946010 - Exonic hg19 ESCA TCGA-VR-A8ER 9 2 5'UTR-CDS Intra-chr q25.33 q26.31 STE:STE20 Seq+ 27009 ChimerSeq STARFusion TCGA_RNA-Seq ORAOV1-LINC00276 ORAOV1 chr11 69487984 - LINC00276 chr2 13850846 - Exonic hg19 ESCA TCGA-VR-A8ER 8 4 Out-of-frame Inter-chr q13.3 p24.3 27010 ChimerSeq STARFusion TCGA_RNA-Seq ZNF207-C17orf75 ZNF207 chr17 30697099 + C17orf75 chr17 30668305 - Exonic hg19 ESCA TCGA-X8-AAAR 15 1 Out-of-frame Intra-chr q11.2 Transcription factor q11.2 Seq+ 27011 ChimerSeq STARFusion TCGA_RNA-Seq CHMP3-CD8A CHMP3 chr2 86756341 - CD8A chr2 87028780 - Exonic hg19 ESCA TCGA-L7-A6VZ 46 10 CDS-5'UTR Intra-chr p11.2 p11.2 Seq+ 27012 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D12-CYP2C18 TBC1D12 chr10 96256929 + CYP2C18 chr10 96447527 + Exonic hg19 ESCA TCGA-L7-A6VZ 12 2 Out-of-frame Intra-chr q23.33 q23.33 Seq+ 27013 ChimerSeq STARFusion TCGA_RNA-Seq SFMBT1-TTLL3 SFMBT1 chr3 52940129 - TTLL3 chr3 9896243 + Exonic hg19 ESCA TCGA-V5-AASX 29 2 CDS-3'UTR Intra-chr p21.1 p25.3 27014 ChimerSeq STARFusion TCGA_RNA-Seq GSTO2-ITPRIP GSTO2 chr10 106059376 + ITPRIP chr10 106075822 - Exonic hg19 ESCA TCGA-V5-AASX 20 2 3'UTR-5'UTR Intra-chr q25.1 q25.1 27015 ChimerSeq STARFusion TCGA_RNA-Seq GRIN2B-C12orf36 GRIN2B chr12 13768032 - C12orf36 chr12 13529227 - Exonic hg19 ESCA TCGA-V5-AASX 11 3 Out-of-frame Intra-chr p13.1 27016 ChimerSeq STARFusion TCGA_RNA-Seq PASD1-ZFX PASD1 chrX 150817174 + ZFX chrX 24225443 + Exonic hg19 ESCA TCGA-VR-AA7B 29 7 Out-of-frame Intra-chr q28 p22.11 Transcription factor Seq+ 27017 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7B-USP49 ZC3H7B chr22 41728231 + USP49 chr6 41774749 - Exonic hg19 ESCA TCGA-VR-AA7B 15 7 CDS-5'UTR Inter-chr q13.2 p21.1 Seq+ 27018 ChimerSeq STARFusion TCGA_RNA-Seq RFX7-NEDD4 RFX7 chr15 56434976 - NEDD4 chr15 56258744 - Exonic hg19 ESCA TCGA-VR-AA7B 13 3 Out-of-frame Intra-chr q21.3 Transcription factor q21.3 Tumor suppressor gene 27019 ChimerSeq STARFusion TCGA_RNA-Seq UBE2G1-ANKFY1 UBE2G1 chr17 4269566 - ANKFY1 chr17 4145743 - Exonic hg19 ESCA TCGA-LN-A7HW 23 12 In-Frame Intra-chr p13.2 p13.2 Seq+ 27020 ChimerSeq STARFusion TCGA_RNA-Seq CEP72-EXOC3 CEP72 chr5 648031 + EXOC3 chr5 453485 + Exonic hg19 ESCA TCGA-V5-AASW 55 14 Out-of-frame Intra-chr p15.33 Seq+ 27021 ChimerSeq STARFusion TCGA_RNA-Seq KIF5B-EPC1 KIF5B chr10 32317356 - EPC1 chr10 32562209 - Exonic hg19 ESCA TCGA-V5-AASW 34 12 Out-of-frame Intra-chr p11.22 p11.22 Seq+ 27022 ChimerSeq STARFusion TCGA_RNA-Seq GNAQ-FBP1 GNAQ chr9 80646016 - FBP1 chr9 97382773 - Exonic hg19 ESCA TCGA-V5-AASW 17 3 Out-of-frame Intra-chr q21.2 Oncogene q22.32 Tumor suppressor gene Seq+ 27023 ChimerSeq STARFusion TCGA_RNA-Seq ABL1-APBA1 ABL1 chr9 133710912 + APBA1 chr9 72132195 - Exonic hg19 ESCA TCGA-V5-AASW 14 2 CDS-5'UTR Intra-chr q34.12 TK:Abl Oncogene q21.12 Seq+ 27024 ChimerSeq STARFusion TCGA_RNA-Seq AGTPBP1-GNAQ AGTPBP1 chr9 88292351 - GNAQ chr9 80336429 - Exonic hg19 ESCA TCGA-V5-AASW 10 4 In-Frame Intra-chr q21.33 q21.2 Oncogene Seq+ 27025 ChimerSeq STARFusion TCGA_RNA-Seq KIF5B-EPC1 KIF5B chr10 32317356 - EPC1 chr10 32562966 - Exonic hg19 ESCA TCGA-V5-AASW 7 12 Out-of-frame Intra-chr p11.22 p11.22 Seq+ 27026 ChimerSeq STARFusion TCGA_RNA-Seq KIF5B-EPC1 KIF5B chr10 32317356 - EPC1 chr10 32562042 - Exonic hg19 ESCA TCGA-V5-AASW 6 12 Out-of-frame Intra-chr p11.22 p11.22 Seq+ 27027 ChimerSeq STARFusion TCGA_RNA-Seq USP36-DNAH17 USP36 chr17 76808942 - DNAH17 chr17 76433950 - Exonic hg19 ESCA TCGA-V5-AASV 36 11 In-Frame Intra-chr q25.3 q25.3 Seq+ 27028 ChimerSeq STARFusion TCGA_RNA-Seq CTCF-HNRNPDL CTCF chr16 67605167 + HNRNPDL chr4 83350565 - Exonic hg19 ESCA TCGA-V5-AASV 22 7 Out-of-frame Inter-chr q22.1 Tumor suppressor gene Transcription factor q21.22 Seq+ 27029 ChimerSeq STARFusion TCGA_RNA-Seq USP36-DNAH17 USP36 chr17 76808942 - DNAH17 chr17 76433962 - Exonic hg19 ESCA TCGA-V5-AASV 10 11 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 27030 ChimerSeq STARFusion TCGA_RNA-Seq ST3GAL3-PTPRF ST3GAL3 chr1 44280605 + PTPRF chr1 44069087 + Exonic hg19 ESCA TCGA-LN-A7HV 30 11 Out-of-frame Intra-chr p34.1 p34.2 Seq+ 27031 ChimerSeq STARFusion TCGA_RNA-Seq NDRG1-C9 NDRG1 chr8 134292477 - C9 chr5 39342300 - Exonic hg19 ESCA TCGA-LN-A7HV 24 18 Out-of-frame Inter-chr q24.22 Tumor suppressor gene p13.1 Seq+ 27032 ChimerSeq STARFusion TCGA_RNA-Seq NDRG1-C9 NDRG1 chr8 134292475 - C9 chr5 39342298 - Exonic hg19 ESCA TCGA-LN-A7HV 19 18 Out-of-frame Inter-chr q24.22 Tumor suppressor gene p13.1 Seq+ 27033 ChimerSeq STARFusion TCGA_RNA-Seq RHOBTB3-RFESD RHOBTB3 chr5 95119667 + RFESD chr5 95020299 + Exonic hg19 ESCA TCGA-LN-A7HV 14 18 CDS-3'UTR Intra-chr q15 q15 27034 ChimerSeq STARFusion TCGA_RNA-Seq RAB9A-EGFL6 RAB9A chrX 13722021 + EGFL6 chrX 13635849 + Exonic hg19 ESCA TCGA-LN-A7HV 14 7 5'UTR-CDS Intra-chr p22.2 p22.2 Seq+ 27035 ChimerSeq STARFusion TCGA_RNA-Seq RAB9A-EGFL6 RAB9A chrX 13707407 + EGFL6 chrX 13635849 + Exonic hg19 ESCA TCGA-LN-A7HV 13 7 5'UTR-CDS Intra-chr p22.2 p22.2 Seq+ 27036 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH3-EPHX3 NOTCH3 chr19 15299046 - EPHX3 chr19 15338911 - Exonic hg19 ESCA TCGA-LN-A7HV 11 2 In-Frame Intra-chr p13.12 Oncogene Tumor suppressor gene p13.12 27037 ChimerSeq STARFusion TCGA_RNA-Seq PKNOX1-NDUFV3 PKNOX1 chr21 44445057 + NDUFV3 chr21 44328974 + Exonic hg19 ESCA TCGA-LN-A7HV 10 3 Out-of-frame Intra-chr q22.3 Tumor suppressor gene Transcription factor q22.3 Seq+ 27038 ChimerSeq STARFusion TCGA_RNA-Seq RNGTT-SRSF12 RNGTT chr6 89673065 - SRSF12 chr6 89816977 - Exonic hg19 ESCA TCGA-LN-A7HV 7 5 Out-of-frame Intra-chr q15 q15 Seq+ 27039 ChimerSeq STARFusion TCGA_RNA-Seq PDZD2-KCNB2 PDZD2 chr5 32053989 + KCNB2 chr8 73848170 + Exonic hg19 ESCA TCGA-LN-A7HV 5 6 Out-of-frame Inter-chr p13.3 q21.11 Seq+ 27040 ChimerSeq STARFusion TCGA_RNA-Seq FRMD6-LINC00640 FRMD6 chr14 52037128 + LINC00640 chr14 51800111 + Exonic hg19 ESCA TCGA-LN-A4A3 33 13 Out-of-frame Intra-chr q22.1 q22.1 27041 ChimerSeq STARFusion TCGA_RNA-Seq DMTF1-TMEM243 DMTF1 chr7 86820343 + TMEM243 chr7 86828373 - Exonic hg19 ESCA TCGA-LN-A4A3 33 10 Out-of-frame Intra-chr q21.12 Tumor suppressor gene Transcription factor q21.12 27042 ChimerSeq STARFusion TCGA_RNA-Seq SARNP-WIBG SARNP chr12 56188143 - WIBG chr12 56297264 - Exonic hg19 ESCA TCGA-LN-A4A3 13 6 In-Frame Intra-chr q13.2 12q13.2 27043 ChimerSeq STARFusion TCGA_RNA-Seq GTPBP10-CCDC132 GTPBP10 chr7 89984544 + CCDC132 chr7 92869179 + Exonic hg19 ESCA TCGA-LN-A4A3 13 1 Out-of-frame Intra-chr q21.13 27044 ChimerSeq STARFusion TCGA_RNA-Seq FRMD6-LINC00640 FRMD6 chr14 51956138 + LINC00640 chr14 51800111 + Exonic hg19 ESCA TCGA-LN-A4A3 8 13 Out-of-frame Intra-chr q22.1 q22.1 27045 ChimerSeq STARFusion TCGA_RNA-Seq DPYD-MIR137HG DPYD chr1 98293670 - MIR137HG chr1 98455125 - Exonic hg19 ESCA TCGA-LN-A4A2 13 12 CDS-3'UTR Intra-chr p21.3 Oncogene p21.3 27046 ChimerSeq STARFusion TCGA_RNA-Seq BEND3-SNX3 BEND3 chr6 107436294 - SNX3 chr6 108544249 - Exonic hg19 ESCA TCGA-LN-A4A2 14 5 5'UTR-CDS Intra-chr q21 q21 Seq+ 27047 ChimerSeq STARFusion TCGA_RNA-Seq LPP-CLDN1 LPP chr3 188124101 + CLDN1 chr3 190030825 - Exonic hg19 ESCA TCGA-LN-A4A2 14 2 In-Frame Intra-chr q27.3 Oncogene q28 Tumor suppressor gene Seq+ 27048 ChimerSeq STARFusion TCGA_RNA-Seq DPYD-MIR137HG DPYD chr1 98293670 - MIR137HG chr1 98460556 - Exonic hg19 ESCA TCGA-LN-A4A2 10 12 CDS-3'UTR Intra-chr p21.3 Oncogene p21.3 27049 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-SSU72 GNB1 chr1 1770629 - SSU72 chr1 1500296 - Exonic hg19 ESCA TCGA-LN-A4A1 211 58 5'UTR-CDS Intra-chr p36.33 p36.33 Seq+ 27050 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R13B-XRCC3 PPP1R13B chr14 104313636 - XRCC3 chr14 104169664 - Exonic hg19 ESCA TCGA-LN-A4A1 51 6 Out-of-frame Intra-chr q32.33 q32.33 Seq+ 27051 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-SSU72 GNB1 chr1 1822259 - SSU72 chr1 1500296 - Exonic hg19 ESCA TCGA-LN-A4A1 34 58 5'UTR-CDS Intra-chr p36.33 p36.33 Seq+ 27052 ChimerSeq STARFusion TCGA_RNA-Seq EMG1-RASSF3 EMG1 chr12 7072511 + RASSF3 chr12 65078567 + Exonic hg19 ESCA TCGA-LN-A4A1 41 13 5'UTR-5'UTR Intra-chr p13.31 q14.2 Tumor suppressor gene 27053 ChimerSeq STARFusion TCGA_RNA-Seq CPEB4-SHISA5 CPEB4 chr5 173337607 + SHISA5 chr3 48520666 - Exonic hg19 ESCA TCGA-LN-A4A1 16 2 Out-of-frame Inter-chr q35.2 p21.31 Seq+ 27054 ChimerSeq STARFusion TCGA_RNA-Seq SMARCAD1-GRID2 SMARCAD1 chr4 95174158 + GRID2 chr4 94128555 + Exonic hg19 ESCA TCGA-LN-A4A1 16 2 In-Frame Intra-chr q22.3 q22.1 Seq+ 27055 ChimerSeq STARFusion TCGA_RNA-Seq SMYD3-ZNF670 SMYD3 chr1 246670356 - ZNF670 chr1 247131094 - Exonic hg19 ESCA TCGA-LN-A4A1 13 3 CDS-3'UTR Intra-chr q44 Transcription factor q44 Transcription factor 27056 ChimerSeq STARFusion TCGA_RNA-Seq SMYD3-ZNF695 SMYD3 chr1 246670356 - ZNF695 chr1 247131094 - Exonic hg19 ESCA TCGA-LN-A4A1 13 3 Out-of-frame Intra-chr q44 Transcription factor q44 Transcription factor Seq+ 27057 ChimerSeq STARFusion TCGA_RNA-Seq NADSYN1-DHCR7 NADSYN1 chr11 71202949 + DHCR7 chr11 71156004 - Exonic hg19 ESCA TCGA-Z6-A9VB 18 0 CDS-5'UTR Intra-chr q13.4 q13.4 Seq+ 27058 ChimerSeq STARFusion TCGA_RNA-Seq NOL6-SUGT1P NOL6 chr9 33473787 - SUGT1P chr9 33510709 - Exonic hg19 ESCA TCGA-LN-A4A6 24 14 Out-of-frame Intra-chr p13.3 27059 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-WDR70 NIPBL chr5 36877280 + WDR70 chr5 37438024 + Exonic hg19 ESCA TCGA-LN-A4A5 42 2 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 27060 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-CMTR1 ZFAND3 chr6 37787792 + CMTR1 chr6 37438797 + Exonic hg19 ESCA TCGA-LN-A4A5 42 1 Out-of-frame Intra-chr p21.2 p21.2 27061 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-CMTR1 ZFAND3 chr6 37787792 + CMTR1 chr6 37429325 + Exonic hg19 ESCA TCGA-LN-A4A5 15 1 Out-of-frame Intra-chr p21.2 p21.2 27062 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5P2-CA5AP1 SLC7A5P2 chr16 21531149 - CA5AP1 chr16 29647649 - Exonic hg19 ESCA TCGA-Z6-A8JD 58 15 Out-of-frame Intra-chr p11.2 27063 ChimerSeq STARFusion TCGA_RNA-Seq RFX2-MLLT1 RFX2 chr19 6110404 - MLLT1 chr19 6230724 - Exonic hg19 ESCA TCGA-Z6-A8JD 52 15 5'UTR-CDS Intra-chr p13.3 Transcription factor p13.3 Seq+ 27064 ChimerSeq STARFusion TCGA_RNA-Seq ERC1-WNT5B ERC1 chr12 1250953 + WNT5B chr12 1740464 + Exonic hg19 ESCA TCGA-Z6-A8JD 16 4 5'UTR-5'UTR Intra-chr p13.33 Seq+ 27065 ChimerSeq STARFusion TCGA_RNA-Seq ME1-UBE3D ME1 chr6 84025029 - UBE3D chr6 83667169 - Exonic hg19 ESCA TCGA-LN-A4A9 8 4 In-Frame Intra-chr q14.2 q14.1 Seq+ 27066 ChimerSeq STARFusion TCGA_RNA-Seq ERBB3-EGFR ERBB3 chr12 56492359 + EGFR chr7 55266410 + Exonic hg19 ESCA TCGA-LN-A4A8 18 0 In-Frame Inter-chr q13.2 Oncogene p11.2 TK:EGFR Oncogene 27067 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992064 + VMP1 chr17 57808782 + Exonic hg19 ESCA TCGA-LN-A4A8 12 3 CDS-5'UTR Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 27068 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1A1-C3orf72 CSNK1A1 chr5 148929638 - C3orf72 chr3 138668354 + Exonic hg19 ESCA TCGA-Z6-A8JE 20 3 Out-of-frame Inter-chr q32 Tumor suppressor gene 27069 ChimerSeq STARFusion TCGA_RNA-Seq RASSF8-CASC1 RASSF8 chr12 26148063 + CASC1 chr12 25308346 - Exonic hg19 ESCA TCGA-Z6-A8JE 12 2 5'UTR-CDS Intra-chr p12.1 Tumor suppressor gene p12.1 Tumor suppressor gene Seq+ 27070 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D23-CMSS1 TBC1D23 chr3 99979915 + CMSS1 chr3 99879274 + Exonic hg19 ESCA TCGA-LN-A7HZ 81 3 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 27071 ChimerSeq STARFusion TCGA_RNA-Seq TIAM2-IGL@ TIAM2 chr6 155537954 + IGL@ chr22 23247178 + Exonic hg19 ESCA TCGA-LN-A7HZ 26 0 Out-of-frame Inter-chr q25.2 q11.22 27072 ChimerSeq STARFusion TCGA_RNA-Seq TIAM2-IGLC3 TIAM2 chr6 155537954 + IGLC3 chr22 23247178 + Exonic hg19 ESCA TCGA-LN-A7HZ 26 0 Out-of-frame Inter-chr q25.2 q11.22 27073 ChimerSeq STARFusion TCGA_RNA-Seq TIAM2-IGLJ3 TIAM2 chr6 155537954 + IGLJ3 chr22 23247178 + Exonic hg19 ESCA TCGA-LN-A7HZ 26 0 Out-of-frame Inter-chr q25.2 q11.22 27074 ChimerSeq STARFusion TCGA_RNA-Seq RPL13P12-PNMA2 RPL13P12 chr17 17286669 - PNMA2 chr8 26364477 - Exonic hg19 ESCA TCGA-LN-A7HZ 17 0 Out-of-frame Inter-chr p21.2 27075 ChimerSeq STARFusion TCGA_RNA-Seq NEK7-PTPRC NEK7 chr1 198126406 + PTPRC chr1 198608356 + Exonic hg19 ESCA TCGA-LN-A7HY 35 16 5'UTR-5'UTR Intra-chr q31.3 Other:NEK Tumor suppressor gene Seq+ 27076 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57746301 + VMP1 chr17 57915656 + Exonic hg19 ESCA TCGA-LN-A7HY 22 11 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 27077 ChimerSeq STARFusion TCGA_RNA-Seq MAPK1-PI4KAP1 MAPK1 chr22 22221612 - PI4KAP1 chr22 20383920 - Exonic hg19 ESCA TCGA-LN-A7HY 20 9 CDS-3'UTR Intra-chr q11.22 Oncogene q11.21 27078 ChimerSeq STARFusion TCGA_RNA-Seq NDC80-IGKC NDC80 chr18 2578025 + IGKC chr2 89160433 - Exonic hg19 ESCA TCGA-LN-A7HY 20 0 Out-of-frame Inter-chr p11.32 p11.2 27079 ChimerSeq STARFusion TCGA_RNA-Seq NDC80-IGKJ4 NDC80 chr18 2578025 + IGKJ4 chr2 89160433 - Exonic hg19 ESCA TCGA-LN-A7HY 20 0 Out-of-frame Inter-chr p11.32 p11.2 27080 ChimerSeq STARFusion TCGA_RNA-Seq CARHSP1-USP7 CARHSP1 chr16 8962823 - USP7 chr16 9017270 - Exonic hg19 ESCA TCGA-IG-A97H 27 1 5'UTR-CDS Intra-chr p13.2 p13.2 27081 ChimerSeq STARFusion TCGA_RNA-Seq CHMP1A-FANCA CHMP1A chr16 89723990 - FANCA chr16 89851372 - Exonic hg19 ESCA TCGA-IG-A97H 14 6 Out-of-frame Intra-chr q24.3 q24.3 Oncogene Seq+ 27082 ChimerSeq STARFusion TCGA_RNA-Seq ACAP2-XXYLT1 ACAP2 chr3 195163524 - XXYLT1 chr3 194790840 - Exonic hg19 ESCA TCGA-IG-A97H 11 3 In-Frame Intra-chr q29 q29 Seq+ 27083 ChimerSeq STARFusion TCGA_RNA-Seq ZNF217-MAVS ZNF217 chr20 52188260 - MAVS chr20 3841979 + Exonic hg19 ESCA TCGA-IG-A50L 25 15 3'UTR-CDS Intra-chr q13.2 Oncogene Transcription factor p13 Seq+ 27084 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 ESCA TCGA-IG-A50L 14 0 Out-of-frame Inter-chr q13.33 p21.1 27085 ChimerSeq STARFusion TCGA_RNA-Seq ZNF217-MAVS ZNF217 chr20 52192266 - MAVS chr20 3841979 + Exonic hg19 ESCA TCGA-IG-A50L 6 15 In-Frame Intra-chr q13.2 Oncogene Transcription factor p13 Seq+ 27086 ChimerSeq STARFusion TCGA_RNA-Seq ZNF217-MAVS ZNF217 chr20 52188260 - MAVS chr20 3842901 + Exonic hg19 ESCA TCGA-IG-A50L 3 15 3'UTR-CDS Intra-chr q13.2 Oncogene Transcription factor p13 Seq+ 27087 ChimerSeq STARFusion TCGA_RNA-Seq ITGA6-MYEOV ITGA6 chr2 173292698 + MYEOV chr11 69156278 + Exonic hg19 ESCA TCGA-LN-A5U6 45 23 CDS-3'UTR Inter-chr q31.1 q13.3 Seq+ 27088 ChimerSeq STARFusion TCGA_RNA-Seq SYNE2-GEMIN2 SYNE2 chr14 64319861 + GEMIN2 chr14 39584033 + Exonic hg19 ESCA TCGA-LN-A5U6 18 13 5'UTR-CDS Intra-chr q23.2 q21.1 Seq+ 27089 ChimerSeq STARFusion TCGA_RNA-Seq SYNE2-GEMIN2 SYNE2 chr14 64319861 + GEMIN2 chr14 39587203 + Exonic hg19 ESCA TCGA-LN-A5U6 7 13 5'UTR-CDS Intra-chr q23.2 q21.1 Seq+ 27090 ChimerSeq STARFusion TCGA_RNA-Seq SYNE2-GEMIN2 SYNE2 chr14 64319865 + GEMIN2 chr14 39584033 + Exonic hg19 ESCA TCGA-LN-A5U6 5 13 5'UTR-CDS Intra-chr q23.2 q21.1 Seq+ 27091 ChimerSeq STARFusion TCGA_RNA-Seq GOLGB1-IQCB1 GOLGB1 chr3 121468479 - IQCB1 chr3 121491560 - Exonic hg19 ESCA TCGA-LN-A5U7 42 36 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 27092 ChimerSeq STARFusion TCGA_RNA-Seq HIST1H2AE-CLVS2 HIST1H2AE chr6 26217281 + CLVS2 chr6 123318457 + Exonic hg19 ESCA TCGA-LN-A5U7 37 23 Out-of-frame Intra-chr p22.2 q22.31 Seq+ 27093 ChimerSeq STARFusion TCGA_RNA-Seq MSH2-EPCAM MSH2 chr2 47643568 + EPCAM chr2 47596067 + Exonic hg19 ESCA TCGA-LN-A5U7 17 2 CDS-5'UTR Intra-chr p21 Oncogene Tumor suppressor gene p21 Seq+ 27094 ChimerSeq STARFusion TCGA_RNA-Seq DRG1-LIMK2 DRG1 chr22 31819396 + LIMK2 chr22 31667122 + Exonic hg19 ESCA TCGA-LN-A5U7 8 6 Out-of-frame Intra-chr q12.2 Tumor suppressor gene q12.2 TKL:LISK 27095 ChimerSeq STARFusion TCGA_RNA-Seq ZFP3-PCCB ZFP3 chr17 4981870 + PCCB chr3 135974698 + Exonic hg19 ESCA TCGA-LN-A5U7 3 14 5'UTR-CDS Inter-chr p13.2 Transcription factor q22.3 Seq+ 27096 ChimerSeq STARFusion TCGA_RNA-Seq EIF2S1-GPHN EIF2S1 chr14 67827173 + GPHN chr14 67576857 + Exonic hg19 ESCA TCGA-LN-A5U5 114 155 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 27097 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 ESCA TCGA-LN-A5U5 16 8 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 27098 ChimerSeq STARFusion TCGA_RNA-Seq DMXL1-TNFAIP8 DMXL1 chr5 118452031 + TNFAIP8 chr5 118728511 + Exonic hg19 ESCA TCGA-LN-A5U5 11 6 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 27099 ChimerSeq STARFusion TCGA_RNA-Seq LIN52-AHSA1 LIN52 chr14 74551696 + AHSA1 chr14 77928503 + Exonic hg19 ESCA TCGA-IG-A6QS 106 0 In-Frame Intra-chr q24.3 q24.3 Seq+ 27100 ChimerSeq STARFusion TCGA_RNA-Seq ZNF526-CEACAMP10 ZNF526 chr19 42724539 + CEACAMP10 chr19 43727110 - Exonic hg19 ESCA TCGA-IG-A6QS 30 10 Out-of-frame Intra-chr q13.2 Transcription factor q13.31 Seq+ 27101 ChimerSeq STARFusion TCGA_RNA-Seq ZNF526-CEACAMP10 ZNF526 chr19 42724539 + CEACAMP10 chr19 43719531 - Exonic hg19 ESCA TCGA-IG-A6QS 24 8 Out-of-frame Intra-chr q13.2 Transcription factor q13.31 Seq+ 27102 ChimerSeq STARFusion TCGA_RNA-Seq TASP1-SEL1L2 TASP1 chr20 13604093 - SEL1L2 chr20 13830965 - Exonic hg19 ESCA TCGA-IG-A6QS 19 5 In-Frame Intra-chr p12.1 p12.1 Seq+ 27103 ChimerSeq STARFusion TCGA_RNA-Seq CUX1-SH2B2 CUX1 chr7 101848450 + SH2B2 chr7 101952097 + Exonic hg19 ESCA TCGA-IG-A6QS 7 13 Out-of-frame Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 Seq+ 27104 ChimerSeq STARFusion TCGA_RNA-Seq ZNF526-CEACAMP10 ZNF526 chr19 42724539 + CEACAMP10 chr19 43783171 - Exonic hg19 ESCA TCGA-IG-A6QS 3 8 Out-of-frame Intra-chr q13.2 Transcription factor q13.31 Seq+ 27105 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0100-ERBB2 KIAA0100 chr17 26958497 - ERBB2 chr17 37849514 + Exonic hg19 ESCA TCGA-V5-A7RE 124 29 CDS-5'UTR Intra-chr q11.2 q12 Oncogene 27106 ChimerSeq STARFusion TCGA_RNA-Seq SUPT6H-PROCA1 SUPT6H chr17 27017998 + PROCA1 chr17 27031886 - Exonic hg19 ESCA TCGA-V5-A7RE 69 41 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 27107 ChimerSeq STARFusion TCGA_RNA-Seq SUPT6H-PROCA1 SUPT6H chr17 27018004 + PROCA1 chr17 27031880 - Exonic hg19 ESCA TCGA-V5-A7RE 66 41 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 27108 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K10-DMKN MAP3K10 chr19 40718757 + DMKN chr19 36002418 - Exonic hg19 ESCA TCGA-L5-A88T 15 0 Out-of-frame Intra-chr q13.2 q13.12 27109 ChimerSeq STARFusion TCGA_RNA-Seq RIPK1-SERPINB9 RIPK1 chr6 3064269 + SERPINB9 chr6 2903462 - Exonic hg19 ESCA TCGA-L5-A88W 21 0 Out-of-frame Intra-chr p25.2 TKL:RIPK p25.2 27110 ChimerSeq STARFusion TCGA_RNA-Seq S100A9-KRT17 S100A9 chr1 153333413 + KRT17 chr17 39780390 - Exonic hg19 ESCA TCGA-L5-A88W 8 15 Out-of-frame Inter-chr q21.3 q21.2 27111 ChimerSeq STARFusion TCGA_RNA-Seq S100A9-KRT17 S100A9 chr1 153333416 + KRT17 chr17 39780380 - Exonic hg19 ESCA TCGA-L5-A88W 7 13 Out-of-frame Inter-chr q21.3 q21.2 27112 ChimerSeq STARFusion TCGA_RNA-Seq S100A9-KRT17 S100A9 chr1 153333389 + KRT17 chr17 39775809 - Exonic hg19 ESCA TCGA-L5-A88W 4 13 Out-of-frame Inter-chr q21.3 q21.2 27113 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-PSMB3 ERBB2 chr17 37876087 + PSMB3 chr17 36916684 + Exonic hg19 ESCA TCGA-L5-A88V 11634 4226 In-Frame Intra-chr q12 Oncogene Seq+ 27114 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-PIP4K2B GRB7 chr17 37898969 + PIP4K2B chr17 36927525 - Exonic hg19 ESCA TCGA-L5-A88V 1333 349 In-Frame Intra-chr q12 q12 Seq+ 27115 ChimerSeq STARFusion TCGA_RNA-Seq MED1-STARD3 MED1 chr17 37580880 - STARD3 chr17 37809734 + Exonic hg19 ESCA TCGA-L5-A88V 514 226 CDS-5'UTR Intra-chr q12 Tumor suppressor gene q12 Seq+ 27116 ChimerSeq STARFusion TCGA_RNA-Seq MED1-STARD3 MED1 chr17 37580880 - STARD3 chr17 37809871 + Exonic hg19 ESCA TCGA-L5-A88V 103 226 Out-of-frame Intra-chr q12 Tumor suppressor gene q12 Seq+ 27117 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF10L-PADI6 ARHGEF10L chr1 17930086 + PADI6 chr1 17714876 + Exonic hg19 ESCA TCGA-L5-A88V 84 22 In-Frame Intra-chr p36.13 Seq+ 27118 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-FBXL20 STARD3 chr17 37793484 + FBXL20 chr17 37459892 - Exonic hg19 ESCA TCGA-L5-A88V 62 13 5'UTR-CDS Intra-chr q12 q12 Seq+ 27119 ChimerSeq STARFusion TCGA_RNA-Seq PRRG2-RPL13A PRRG2 chr19 50091889 + RPL13A chr19 49994986 + Exonic hg19 ESCA TCGA-L5-A88V 28 11 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 27120 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF10L-PADI6 ARHGEF10L chr1 17930086 + PADI6 chr1 17714879 + Exonic hg19 ESCA TCGA-L5-A88V 10 22 In-Frame Intra-chr p36.13 Seq+ 27121 ChimerSeq STARFusion TCGA_RNA-Seq PSMB3-ERBB2 PSMB3 chr17 36920430 + ERBB2 chr17 37873594 + Exonic hg19 ESCA TCGA-L5-A88V 9 23 Out-of-frame Intra-chr q12 Oncogene 27122 ChimerSeq STARFusion TCGA_RNA-Seq CDK12-NEUROD2 CDK12 chr17 37649143 + NEUROD2 chr17 37764318 - Exonic hg19 ESCA TCGA-L5-A88V 12 5 CDS-5'UTR Intra-chr q12 Oncogene q12 Transcription factor Seq+ 27123 ChimerSeq STARFusion TCGA_RNA-Seq TMEM50B-DONSON TMEM50B chr21 34837649 - DONSON chr21 34945678 - Exonic hg19 ESCA TCGA-L5-A88V 10 4 3'UTR-3'UTR Intra-chr q22.11 27124 ChimerSeq STARFusion TCGA_RNA-Seq PSMB3-ERBB2 PSMB3 chr17 36918690 + ERBB2 chr17 37866433 + Exonic hg19 ESCA TCGA-L5-A88V 4 21 Out-of-frame Intra-chr q12 Oncogene 27125 ChimerSeq STARFusion TCGA_RNA-Seq PSMB3-ERBB2 PSMB3 chr17 36920471 + ERBB2 chr17 37871734 + Exonic hg19 ESCA TCGA-L5-A88V 4 21 Out-of-frame Intra-chr q12 Oncogene 27126 ChimerSeq STARFusion TCGA_RNA-Seq PSMB3-ERBB2 PSMB3 chr17 36916703 + ERBB2 chr17 37872634 + Exonic hg19 ESCA TCGA-L5-A88V 3 21 Out-of-frame Intra-chr q12 Oncogene 27127 ChimerSeq STARFusion TCGA_RNA-Seq PSMB3-ERBB2 PSMB3 chr17 36916751 + ERBB2 chr17 37872131 + Exonic hg19 ESCA TCGA-L5-A88V 3 21 Out-of-frame Intra-chr q12 Oncogene 27128 ChimerSeq STARFusion TCGA_RNA-Seq PSMB3-ERBB2 PSMB3 chr17 36920433 + ERBB2 chr17 37872612 + Exonic hg19 ESCA TCGA-L5-A88V 3 21 Out-of-frame Intra-chr q12 Oncogene 27129 ChimerSeq STARFusion TCGA_RNA-Seq PSMB3-ERBB2 PSMB3 chr17 36916746 + ERBB2 chr17 37873665 + Exonic hg19 ESCA TCGA-L5-A88V 3 21 Out-of-frame Intra-chr q12 Oncogene 27130 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3B-TNIK FNDC3B chr3 171851336 + TNIK chr3 171065007 - Exonic hg19 ESCA TCGA-L5-A88S 30 16 CDS-3'UTR Intra-chr q26.31 q26.31 STE:STE20 Seq+ 27131 ChimerSeq STARFusion TCGA_RNA-Seq PHC3-NCEH1 PHC3 chr3 169831148 - NCEH1 chr3 172365904 - Exonic hg19 ESCA TCGA-L5-A88S 18 11 Out-of-frame Intra-chr q26.2 Tumor suppressor gene q26.31 Seq+ 27132 ChimerSeq STARFusion TCGA_RNA-Seq PHC3-FNDC3B PHC3 chr3 169831148 - FNDC3B chr3 172114954 + Exonic hg19 ESCA TCGA-L5-A88S 17 8 Out-of-frame Intra-chr q26.2 Tumor suppressor gene q26.31 Seq+ 27133 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3B-TNIK FNDC3B chr3 171851336 + TNIK chr3 170946010 - Exonic hg19 ESCA TCGA-L5-A88S 12 14 Out-of-frame Intra-chr q26.31 q26.31 STE:STE20 Seq+ 27134 ChimerSeq STARFusion TCGA_RNA-Seq PHC3-FNDC3B PHC3 chr3 169824620 - FNDC3B chr3 172114954 + Exonic hg19 ESCA TCGA-L5-A88S 13 8 Out-of-frame Intra-chr q26.2 Tumor suppressor gene q26.31 Seq+ 27135 ChimerSeq STARFusion TCGA_RNA-Seq PHC3-NCEH1 PHC3 chr3 169824620 - NCEH1 chr3 172365904 - Exonic hg19 ESCA TCGA-L5-A88S 7 11 Out-of-frame Intra-chr q26.2 Tumor suppressor gene q26.31 Seq+ 27136 ChimerSeq STARFusion TCGA_RNA-Seq PHC3-NCEH1 PHC3 chr3 169824620 - NCEH1 chr3 172429076 - Exonic hg19 ESCA TCGA-L5-A88S 5 11 CDS-5'UTR Intra-chr q26.2 Tumor suppressor gene q26.31 Seq+ 27137 ChimerSeq STARFusion TCGA_RNA-Seq GPR111-TNFRSF21 GPR111 chr6 47631313 + TNFRSF21 chr6 47221257 - Exonic hg19 ESCA TCGA-L5-A88Y 40 25 5'UTR-CDS Intra-chr p12.3 Seq+ 27138 ChimerSeq STARFusion TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105561040 - OBFC1 chr10 105652010 - Exonic hg19 ESCA TCGA-L5-A88Y 31 15 In-Frame Intra-chr q24.33 Seq+ 27139 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA1-CYP2C19 PLEKHA1 chr10 124159904 + CYP2C19 chr10 96602594 + Exonic hg19 ESCA TCGA-L5-A88Y 31 13 In-Frame Intra-chr q26.13 q23.33 Oncogene Seq+ 27140 ChimerSeq STARFusion TCGA_RNA-Seq GPR111-TNFRSF21 GPR111 chr6 47624395 + TNFRSF21 chr6 47221257 - Exonic hg19 ESCA TCGA-L5-A88Y 11 25 5'UTR-CDS Intra-chr p12.3 Seq+ 27141 ChimerSeq STARFusion TCGA_RNA-Seq ATAT1-PPP1R18 ATAT1 chr6 30596207 + PPP1R18 chr6 30654352 - Exonic hg19 ESCA TCGA-L5-A88Y 13 2 CDS-5'UTR Intra-chr p21.33 Seq+ 27142 ChimerSeq STARFusion TCGA_RNA-Seq HSP90AB1-CEA HSP90AB1 chr6 44218145 + CEA chr19 42212545 + Exonic hg19 ESCA TCGA-L5-A88Y 8 3 Out-of-frame Inter-chr p21.1 Oncogene 27143 ChimerSeq STARFusion TCGA_RNA-Seq HSP90AB1-CEACAM5 HSP90AB1 chr6 44218145 + CEACAM5 chr19 42212545 + Exonic hg19 ESCA TCGA-L5-A88Y 8 3 Out-of-frame Inter-chr p21.1 Oncogene q13.2 27144 ChimerSeq STARFusion TCGA_RNA-Seq FAM131B-GIPC1 FAM131B chr7 143059853 - GIPC1 chr19 14603727 - Exonic hg19 ESCA TCGA-L5-A88Z 40 0 Out-of-frame Inter-chr q34 p13.12 27145 ChimerSeq STARFusion TCGA_RNA-Seq FAM131B-GIPC1 FAM131B chr7 143059853 - GIPC1 chr19 14602558 - Exonic hg19 ESCA TCGA-L5-A88Z 13 0 Out-of-frame Inter-chr q34 p13.12 27146 ChimerSeq STARFusion TCGA_RNA-Seq SEC23B-CSRP2BP SEC23B chr20 18496380 + CSRP2BP chr20 18162354 + Exonic hg19 ESCA TCGA-L5-A4ON 71 19 In-Frame Intra-chr p11.23 Seq+ 27147 ChimerSeq STARFusion TCGA_RNA-Seq ITPK1-BTBD7 ITPK1 chr14 93542940 - BTBD7 chr14 93730339 - Exonic hg19 ESCA TCGA-L5-A4ON 32 12 Out-of-frame Intra-chr Seq+ 27148 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142481912 + KLK5 chr19 51447042 - Exonic hg19 ESCA TCGA-L5-A4OH 19 0 3'UTR-CDS Inter-chr q13.41 27149 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142460418 + KLK5 chr19 51447042 - Exonic hg19 ESCA TCGA-L5-A4OH 19 0 In-Frame Inter-chr q13.41 27150 ChimerSeq STARFusion TCGA_RNA-Seq NOS2-MYO18A NOS2 chr17 26125726 - MYO18A chr17 27449271 - Exonic hg19 ESCA TCGA-L5-A4OH 17 7 Out-of-frame Intra-chr q11.2 q11.2 Oncogene Seq+ 27151 ChimerSeq STARFusion TCGA_RNA-Seq BCAR1-PGA5 BCAR1 chr16 75297845 - PGA5 chr11 61017138 + Exonic hg19 ESCA TCGA-L5-A4OJ 89 0 Out-of-frame Inter-chr q23.1 q12.2 27152 ChimerSeq STARFusion TCGA_RNA-Seq BCAR1-PGA5 BCAR1 chr16 75297845 - PGA5 chr11 60997388 + Exonic hg19 ESCA TCGA-L5-A4OJ 51 0 Out-of-frame Inter-chr q23.1 q12.2 27153 ChimerSeq STARFusion TCGA_RNA-Seq PGA4-KIAA1199 PGA4 chr11 60992922 + KIAA1199 chr15 81243197 + Exonic hg19 ESCA TCGA-L5-A4OJ 27 0 Out-of-frame Inter-chr q12.2 27154 ChimerSeq STARFusion TCGA_RNA-Seq PGA4-LIPF PGA4 chr11 60999169 + LIPF chr10 90438428 + Exonic hg19 ESCA TCGA-L5-A4OJ 3 96 Out-of-frame Inter-chr q12.2 q23.31 27155 ChimerSeq STARFusion TCGA_RNA-Seq PGA5-KIAA1199 PGA5 chr11 61011748 + KIAA1199 chr15 81243197 + Exonic hg19 ESCA TCGA-L5-A4OJ 27 0 Out-of-frame Inter-chr q12.2 27156 ChimerSeq STARFusion TCGA_RNA-Seq PGA4-KIAA1199 PGA4 chr11 61011748 + KIAA1199 chr15 81243197 + Exonic hg19 ESCA TCGA-L5-A4OJ 26 0 Out-of-frame Inter-chr q12.2 27157 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGC LIPF chr10 90438312 + PGC chr6 41704567 - Exonic hg19 ESCA TCGA-L5-A4OJ 4 53 Out-of-frame Inter-chr q23.31 p21.1 27158 ChimerSeq STARFusion TCGA_RNA-Seq ICAM1-MRPL4 ICAM1 chr19 10381902 + MRPL4 chr19 10362822 + Exonic hg19 ESCA TCGA-L5-A4OE 22 9 CDS-5'UTR Intra-chr p13.2 p13.2 27159 ChimerSeq STARFusion TCGA_RNA-Seq RIPK1-SERPINB9 RIPK1 chr6 3064264 + SERPINB9 chr6 2903467 - Exonic hg19 ESCA TCGA-L5-A4OE 22 0 Out-of-frame Intra-chr p25.2 TKL:RIPK p25.2 27160 ChimerSeq STARFusion TCGA_RNA-Seq CARS-SLC22A18AS CARS chr11 3028109 - SLC22A18AS chr11 2909865 - Exonic hg19 ESCA TCGA-L5-A4OF 171 24 Out-of-frame Intra-chr Seq+ 27161 ChimerSeq STARFusion TCGA_RNA-Seq SNRPD1-OSBPL1A SNRPD1 chr18 19192404 + OSBPL1A chr18 21957499 - Exonic hg19 ESCA TCGA-L5-A4OF 44 13 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 27162 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R2-SBF1 PPP6R2 chr22 50781979 + SBF1 chr22 50887079 - Exonic hg19 ESCA TCGA-L5-A4OF 45 5 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 27163 ChimerSeq STARFusion TCGA_RNA-Seq AFF4-RPL34 AFF4 chr5 132215369 - RPL34 chr4 109541732 + Exonic hg19 ESCA TCGA-L5-A4OF 37 31 Out-of-frame Inter-chr q31.1 q25 Seq+ 27164 ChimerSeq STARFusion TCGA_RNA-Seq HRSP12-LINC00511 HRSP12 chr8 99120874 - LINC00511 chr17 70595283 - Exonic hg19 ESCA TCGA-L5-A4OG 12 4 CDS-3'UTR Inter-chr q24.3 Seq+ 27165 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890980 - BCAR4 chr16 11914154 - Exonic hg19 ESCA TCGA-L5-A4OX 35 13 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 27166 ChimerSeq STARFusion TCGA_RNA-Seq PDXK-KLF10 PDXK chr21 45154004 + KLF10 chr8 103664625 - Exonic hg19 ESCA TCGA-L5-A4OX 37 4 Out-of-frame Inter-chr q22.3 q22.3 Tumor suppressor gene Transcription factor Seq+ 27167 ChimerSeq STARFusion TCGA_RNA-Seq STAT5B-NSRP1 STAT5B chr17 40428266 - NSRP1 chr17 28499560 + Exonic hg19 ESCA TCGA-L5-A4OX 34 5 5'UTR-CDS Intra-chr q21.2 Transcription factor q11.2 Seq+ 27168 ChimerSeq STARFusion TCGA_RNA-Seq DYRK1A-DENND3 DYRK1A chr21 38739930 + DENND3 chr8 142185299 + Exonic hg19 ESCA TCGA-L5-A4OX 15 5 5'UTR-CDS Inter-chr q22.13 CMGC:DYRK q24.3 Seq+ 27169 ChimerSeq STARFusion TCGA_RNA-Seq DENND3-SPATA20P1 DENND3 chr8 142188295 + SPATA20P1 chr21 39610662 - Exonic hg19 ESCA TCGA-L5-A4OX 12 8 Out-of-frame Inter-chr q24.3 q22.13 27170 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890980 - BCAR4 chr16 11915612 - Exonic hg19 ESCA TCGA-L5-A4OX 8 13 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 27171 ChimerSeq STARFusion TCGA_RNA-Seq STK3-COX6C STK3 chr8 99718695 - COX6C chr8 100899846 - Exonic hg19 ESCA TCGA-L5-A4OT 80 21 In-Frame Intra-chr q22.2 q22.2 Seq+ 27172 ChimerSeq STARFusion TCGA_RNA-Seq RSF1-PAK1 RSF1 chr11 77531574 - PAK1 chr11 77103586 - Exonic hg19 ESCA TCGA-L5-A4OT 24 7 CDS-5'UTR Intra-chr q14.1 q14.1 STE:STE20 Seq+ 27173 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK5-TRAFD1 MAPKAPK5 chr12 112308984 + TRAFD1 chr12 112568315 + Exonic hg19 ESCA TCGA-L5-A4OT 20 12 CDS-5'UTR Intra-chr q24.12 CAMK:MAPKAPK q24.13 Transcription factor Seq+ 27174 ChimerSeq STARFusion TCGA_RNA-Seq RPL13P12-PNMA2 RPL13P12 chr17 17286669 - PNMA2 chr8 26364477 - Exonic hg19 ESCA TCGA-L5-A4OT 16 0 Out-of-frame Inter-chr p21.2 27175 ChimerSeq STARFusion TCGA_RNA-Seq VCL-C10orf11 VCL chr10 75802911 + C10orf11 chr10 77795766 + Exonic hg19 ESCA TCGA-L5-A4OT 10 6 In-Frame Intra-chr q22.2 Seq+ 27176 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK5-TRAFD1 MAPKAPK5 chr12 112308984 + TRAFD1 chr12 112572542 + Exonic hg19 ESCA TCGA-L5-A4OT 2 12 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.13 Transcription factor Seq+ 27177 ChimerSeq STARFusion TCGA_RNA-Seq ATAD5-IKZF3 ATAD5 chr17 29196664 + IKZF3 chr17 37922746 - Exonic hg19 ESCA TCGA-L5-A4OU 84 16 In-Frame Intra-chr q11.2 q21.1 Tumor suppressor gene Transcription factor Seq+ 27178 ChimerSeq STARFusion TCGA_RNA-Seq CAPZA2-STYXL1 CAPZA2 chr7 116528244 + STYXL1 chr7 75658021 - Exonic hg19 ESCA TCGA-L5-A4OU 19 12 In-Frame Intra-chr q31.2 q11.23 Seq+ 27179 ChimerSeq STARFusion TCGA_RNA-Seq MICALL2-ZFAND2A MICALL2 chr7 1498820 - ZFAND2A chr7 1197893 - Exonic hg19 ESCA TCGA-L5-A4OU 19 7 CDS-5'UTR Intra-chr p22.3 p22.3 Seq+ 27180 ChimerSeq STARFusion TCGA_RNA-Seq MAP2K4-PRR11 MAP2K4 chr17 11958308 + PRR11 chr17 57262415 + Exonic hg19 ESCA TCGA-L5-A4OU 14 3 In-Frame Intra-chr p12 STE:STE7 Oncogene Tumor suppressor gene q22 Seq+ 27181 ChimerSeq STARFusion TCGA_RNA-Seq TMEM60-HIP1 TMEM60 chr7 77427571 - HIP1 chr7 75178299 - Exonic hg19 ESCA TCGA-L5-A4OU 13 2 5'UTR-CDS Intra-chr q11.23 q11.23 Seq+ 27182 ChimerSeq STARFusion TCGA_RNA-Seq HIPK2-CPSF4 HIPK2 chr7 139477404 - CPSF4 chr7 99042412 + Exonic hg19 ESCA TCGA-L5-A4OU 12 1 In-Frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q22.1 Seq+ 27183 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-GAST KANSL1 chr17 44301037 - GAST chr17 39871684 + Exonic hg19 ESCA TCGA-L5-A4OW 333 155 5'UTR-5'UTR Intra-chr q21.2 Seq+ 27184 ChimerSeq STARFusion TCGA_RNA-Seq CRHR1-GAST CRHR1 chr17 43699407 + GAST chr17 39871684 + Exonic hg19 ESCA TCGA-L5-A4OW 331 155 5'UTR-5'UTR Intra-chr q21.31 q21.2 27185 ChimerSeq STARFusion TCGA_RNA-Seq PGS1-BPTF PGS1 chr17 76400170 + BPTF chr17 65916131 + Exonic hg19 ESCA TCGA-L5-A4OW 186 39 In-Frame Intra-chr q25.3 q24.2 Transcription factor Seq+ 27186 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-BAIAP2 SEPT9 chr17 75303279 + BAIAP2 chr17 79089570 + Exonic hg19 ESCA TCGA-L5-A4OW 93 26 Out-of-frame Intra-chr q25.3 Seq+ 27187 ChimerSeq STARFusion TCGA_RNA-Seq STAT3-NOS2 STAT3 chr17 40540297 - NOS2 chr17 26116714 - Exonic hg19 ESCA TCGA-L5-A4OW 93 17 5'UTR-CDS Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q11.2 Seq+ 27188 ChimerSeq STARFusion TCGA_RNA-Seq TBCD-CCDC57 TBCD chr17 80772810 + CCDC57 chr17 80059742 - Exonic hg19 ESCA TCGA-L5-A4OW 88 27 In-Frame Intra-chr q25.3 Seq+ 27189 ChimerSeq STARFusion TCGA_RNA-Seq JUP-TTLL6 JUP chr17 39925221 - TTLL6 chr17 46865361 - Exonic hg19 ESCA TCGA-L5-A4OW 69 19 In-Frame Intra-chr q21.2 Tumor suppressor gene q21.32 Seq+ 27190 ChimerSeq STARFusion TCGA_RNA-Seq ETV4-TCAP ETV4 chr17 41610042 - TCAP chr17 37821969 + Exonic hg19 ESCA TCGA-L5-A4OW 57 9 Out-of-frame Intra-chr q21.31 Oncogene Transcription factor q12 Seq+ 27191 ChimerSeq STARFusion TCGA_RNA-Seq CERS6-NOSTRIN CERS6 chr2 169404211 + NOSTRIN chr2 169707594 + Exonic hg19 ESCA TCGA-L5-A4OW 44 13 In-Frame Intra-chr q24.3 Seq+ 27192 ChimerSeq STARFusion TCGA_RNA-Seq TTLL6-NOS2 TTLL6 chr17 46862285 - NOS2 chr17 26116714 - Exonic hg19 ESCA TCGA-L5-A4OW 34 20 Out-of-frame Intra-chr q21.32 q11.2 Seq+ 27193 ChimerSeq STARFusion TCGA_RNA-Seq KRIT1-CDK6 KRIT1 chr7 91871348 - CDK6 chr7 92247521 - Exonic hg19 ESCA TCGA-L5-A4OW 36 0 Out-of-frame Intra-chr q21.2 Tumor suppressor gene q21.2 CMGC:CDK Oncogene Tumor suppressor gene Seq+ 27194 ChimerSeq STARFusion TCGA_RNA-Seq MBOAT1-TPMT MBOAT1 chr6 20212367 - TPMT chr6 18149402 - Exonic hg19 ESCA TCGA-L5-A4OW 21 3 CDS-5'UTR Intra-chr p22.3 p22.3 Seq+ 27195 ChimerSeq STARFusion TCGA_RNA-Seq TPMT-BTBD9 TPMT chr6 18149219 - BTBD9 chr6 38312869 - Exonic hg19 ESCA TCGA-L5-A4OW 17 4 In-Frame Intra-chr p22.3 p21.2 Seq+ 27196 ChimerSeq STARFusion TCGA_RNA-Seq CWC25-LPCAT1 CWC25 chr17 36962550 - LPCAT1 chr5 1489973 - Exonic hg19 ESCA TCGA-L5-A4OW 14 1 Out-of-frame Inter-chr q12 Seq+ 27197 ChimerSeq STARFusion TCGA_RNA-Seq FAM134C-NOS2 FAM134C chr17 40734022 - NOS2 chr17 26090031 - Exonic hg19 ESCA TCGA-L5-A4OW 13 3 Out-of-frame Intra-chr q11.2 27198 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-CDK12 FBXL20 chr17 37557614 - CDK12 chr17 37657503 + Exonic hg19 ESCA TCGA-L5-A4OW 11 5 Out-of-frame Intra-chr q12 q12 Oncogene Seq+ 27199 ChimerSeq STARFusion TCGA_RNA-Seq CYP51A1-ANKIB1 CYP51A1 chr7 91763487 - ANKIB1 chr7 91924203 + Exonic hg19 ESCA TCGA-L5-A4OW 10 8 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 27200 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-CDK12 FBXL20 chr17 37558426 - CDK12 chr17 37657503 + Exonic hg19 ESCA TCGA-L5-A4OW 9 5 5'UTR-CDS Intra-chr q12 q12 Oncogene Seq+ 27201 ChimerSeq STARFusion TCGA_RNA-Seq REG1A-DDX52 REG1A chr2 79350526 + DDX52 chr17 35985986 - Exonic hg19 ESCA TCGA-L5-A4OP 30 0 Out-of-frame Inter-chr p12 q12 27202 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA4 LIPF chr10 90438255 + PGA4 chr11 61018856 + Exonic hg19 ESCA TCGA-L5-A4OR 19 161 Out-of-frame Inter-chr q23.31 q12.2 27203 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA5 LIPF chr10 90438255 + PGA5 chr11 61018856 + Exonic hg19 ESCA TCGA-L5-A4OR 19 148 Out-of-frame Inter-chr q23.31 q12.2 27204 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA4 LIPF chr10 90438256 + PGA4 chr11 60999107 + Exonic hg19 ESCA TCGA-L5-A4OR 9 152 Out-of-frame Inter-chr q23.31 q12.2 27205 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA4 LIPF chr10 90429696 + PGA4 chr11 60970990 + Exonic hg19 ESCA TCGA-L5-A4OR 6 160 Out-of-frame Inter-chr q23.31 q12.2 27206 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA4 LIPF chr10 90436038 + PGA4 chr11 61017222 + Exonic hg19 ESCA TCGA-L5-A4OR 4 160 Out-of-frame Inter-chr q23.31 q12.2 27207 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA4 LIPF chr10 90438256 + PGA4 chr11 60990531 + Exonic hg19 ESCA TCGA-L5-A4OR 3 160 Out-of-frame Inter-chr q23.31 q12.2 27208 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA5 LIPF chr10 90429696 + PGA5 chr11 60970990 + Exonic hg19 ESCA TCGA-L5-A4OR 6 148 Out-of-frame Inter-chr q23.31 q12.2 27209 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA5 LIPF chr10 90436038 + PGA5 chr11 61017222 + Exonic hg19 ESCA TCGA-L5-A4OR 4 148 Out-of-frame Inter-chr q23.31 q12.2 27210 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA5 LIPF chr10 90438254 + PGA5 chr11 60971695 + Exonic hg19 ESCA TCGA-L5-A4OR 3 147 Out-of-frame Inter-chr q23.31 q12.2 27211 ChimerSeq STARFusion TCGA_RNA-Seq PGA4-LIPF PGA4 chr11 60997697 + LIPF chr10 90438381 + Exonic hg19 ESCA TCGA-L5-A4OR 3 111 Out-of-frame Inter-chr q12.2 q23.31 27212 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA4 LIPF chr10 90438248 + PGA4 chr11 60999099 + Exonic hg19 ESCA TCGA-L5-A4OR 9 40 Out-of-frame Inter-chr q23.31 q12.2 27213 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA4 LIPF chr10 90429623 + PGA4 chr11 60970994 + Exonic hg19 ESCA TCGA-L5-A4OR 4 40 Out-of-frame Inter-chr q23.31 q12.2 27214 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA4 LIPF chr10 90429696 + PGA4 chr11 60989826 + Exonic hg19 ESCA TCGA-L5-A4OR 3 40 Out-of-frame Inter-chr q23.31 q12.2 27215 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA4 LIPF chr10 90429616 + PGA4 chr11 60989823 + Exonic hg19 ESCA TCGA-L5-A4OR 3 40 Out-of-frame Inter-chr q23.31 q12.2 27216 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA4 LIPF chr10 90428355 + PGA4 chr11 60974969 + Exonic hg19 ESCA TCGA-L5-A4OR 3 40 Out-of-frame Inter-chr q23.31 q12.2 27217 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA5 LIPF chr10 90429623 + PGA5 chr11 60970994 + Exonic hg19 ESCA TCGA-L5-A4OR 4 35 Out-of-frame Inter-chr q23.31 q12.2 27218 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA5 LIPF chr10 90429616 + PGA5 chr11 61008649 + Exonic hg19 ESCA TCGA-L5-A4OR 3 35 Out-of-frame Inter-chr q23.31 q12.2 27219 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA5 LIPF chr10 90428355 + PGA5 chr11 60974969 + Exonic hg19 ESCA TCGA-L5-A4OR 3 35 Out-of-frame Inter-chr q23.31 q12.2 27220 ChimerSeq STARFusion TCGA_RNA-Seq NOM1-RNF32 NOM1 chr7 156746992 + RNF32 chr7 156468390 + Exonic hg19 ESCA TCGA-L5-A4OS 97 40 In-Frame Intra-chr q36.3 q36.3 Seq+ 27221 ChimerSeq STARFusion TCGA_RNA-Seq JUP-KLHL11 JUP chr17 39919235 - KLHL11 chr17 40011573 - Exonic hg19 ESCA TCGA-L5-A4OS 58 30 Out-of-frame Intra-chr q21.2 Tumor suppressor gene q21.2 Seq+ 27222 ChimerSeq STARFusion TCGA_RNA-Seq NSMF-ZMYND19 NSMF chr9 140346817 - ZMYND19 chr9 140477138 - Exonic hg19 ESCA TCGA-L5-A4OS 52 24 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 27223 ChimerSeq STARFusion TCGA_RNA-Seq ACLY-WEE1 ACLY chr17 40030064 - WEE1 chr11 9609996 + Exonic hg19 ESCA TCGA-L5-A4OS 49 21 In-Frame Inter-chr q21.2 p15.4 Seq+ 27224 ChimerSeq STARFusion TCGA_RNA-Seq CBL-TRAPPC4 CBL chr11 119158656 + TRAPPC4 chr11 118894031 + Exonic hg19 ESCA TCGA-L5-A4OS 43 32 In-Frame Intra-chr q23.3 Oncogene Tumor suppressor gene Seq+ 27225 ChimerSeq STARFusion TCGA_RNA-Seq STAT2-ANKRD52 STAT2 chr12 56753842 - ANKRD52 chr12 56642654 - Exonic hg19 ESCA TCGA-L5-A4OS 37 5 5'UTR-CDS Intra-chr q13.3 Transcription factor q13.3 Seq+ 27226 ChimerSeq STARFusion TCGA_RNA-Seq SMURF1-CFLAR SMURF1 chr7 98741349 - CFLAR chr2 201994452 + Exonic hg19 ESCA TCGA-L5-A4OS 32 17 CDS-5'UTR Inter-chr q33.1 Seq+ 27227 ChimerSeq STARFusion TCGA_RNA-Seq CNP-DNAJC7 CNP chr17 40125765 + DNAJC7 chr17 40139928 - Exonic hg19 ESCA TCGA-L5-A4OS 21 10 Out-of-frame Intra-chr q21.2 q21.2 27228 ChimerSeq STARFusion TCGA_RNA-Seq MAFF-RCOR1 MAFF chr22 38598219 + RCOR1 chr14 103148232 + Exonic hg19 ESCA TCGA-L5-A4OS 20 8 5'UTR-CDS Inter-chr q13.1 Transcription factor q32.31 Seq+ 27229 ChimerSeq STARFusion TCGA_RNA-Seq UBN1-MGRN1 UBN1 chr16 4918904 + MGRN1 chr16 4723499 + Exonic hg19 ESCA TCGA-L5-A4OS 19 9 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 27230 ChimerSeq STARFusion TCGA_RNA-Seq ACOT7-PLEKHG5 ACOT7 chr1 6341162 - PLEKHG5 chr1 6556629 - Exonic hg19 ESCA TCGA-L5-A4OS 17 11 Out-of-frame Intra-chr p36.31 p36.31 Oncogene Seq+ 27231 ChimerSeq STARFusion TCGA_RNA-Seq ACTL8-ACOX1 ACTL8 chr1 18081999 + ACOX1 chr17 73974774 - Exonic hg19 ESCA TCGA-L5-A4OS 17 8 5'UTR-5'UTR Inter-chr p36.13 q25.1 Seq+ 27232 ChimerSeq STARFusion TCGA_RNA-Seq PHF21A-LEUTX PHF21A chr11 46142486 - LEUTX chr19 40275167 + Exonic hg19 ESCA TCGA-L5-A4OS 17 7 5'UTR-5'UTR Inter-chr p11.2 Transcription factor Transcription factor Seq+ 27233 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0368-C9orf84 KIAA0368 chr9 114235177 - C9orf84 chr9 114510479 - Exonic hg19 ESCA TCGA-L5-A4OS 17 6 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 27234 ChimerSeq STARFusion TCGA_RNA-Seq EIF3L-NOL12 EIF3L chr22 38274178 + NOL12 chr22 38106434 + Exonic hg19 ESCA TCGA-L5-A4OS 14 8 CDS-3'UTR Intra-chr q13.1 q13.1 27235 ChimerSeq STARFusion TCGA_RNA-Seq EIF3L-TRIOBP EIF3L chr22 38274178 + TRIOBP chr22 38106434 + Exonic hg19 ESCA TCGA-L5-A4OS 14 8 In-Frame Intra-chr q13.1 q13.1 Seq+ 27236 ChimerSeq STARFusion TCGA_RNA-Seq CRAMP1L-IFT140 CRAMP1L chr16 1664986 + IFT140 chr16 1621535 - Exonic hg19 ESCA TCGA-L5-A4OS 13 6 Out-of-frame Intra-chr p13.3 Seq+ 27237 ChimerSeq STARFusion TCGA_RNA-Seq ANKFY1-CCDC88C ANKFY1 chr17 4145551 - CCDC88C chr14 91757428 - Exonic hg19 ESCA TCGA-L5-A4OS 13 3 In-Frame Inter-chr p13.2 q32.12 Seq+ 27238 ChimerSeq STARFusion TCGA_RNA-Seq REG1A-DDX52 REG1A chr2 79350526 + DDX52 chr17 35985986 - Exonic hg19 ESCA TCGA-L5-A4OS 13 0 Out-of-frame Inter-chr p12 q12 27239 ChimerSeq STARFusion TCGA_RNA-Seq GRB2-PADI1 GRB2 chr17 73317740 - PADI1 chr1 17570505 + Exonic hg19 ESCA TCGA-L5-A4OS 11 5 In-Frame Inter-chr q25.1 Seq+ 27240 ChimerSeq STARFusion TCGA_RNA-Seq NSMF-ZMYND19 NSMF chr9 140346817 - ZMYND19 chr9 140477505 - Exonic hg19 ESCA TCGA-L5-A4OS 6 24 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 27241 ChimerSeq STARFusion TCGA_RNA-Seq CACNA1D-GNL3 CACNA1D chr3 53804579 + GNL3 chr3 52724608 + Exonic hg19 ESCA TCGA-L5-A4OS 9 11 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 27242 ChimerSeq STARFusion TCGA_RNA-Seq TSEN54-KIAA0195 TSEN54 chr17 73519860 + KIAA0195 chr17 73485657 + Exonic hg19 ESCA TCGA-L5-A4OS 11 3 Out-of-frame Intra-chr q25.1 Seq+ 27243 ChimerSeq STARFusion TCGA_RNA-Seq EWSR1-KREMEN1 EWSR1 chr22 29668420 + KREMEN1 chr22 29517345 + Exonic hg19 ESCA TCGA-L5-A4OS 9 10 Out-of-frame Intra-chr q12.2 q12.1 Seq+ 27244 ChimerSeq STARFusion TCGA_RNA-Seq FAM200A-CYP3A5 FAM200A chr7 99149477 - CYP3A5 chr7 99264688 - Exonic hg19 ESCA TCGA-L5-A4OS 10 6 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 27245 ChimerSeq STARFusion TCGA_RNA-Seq COL27A1-ZNF618 COL27A1 chr9 116999995 + ZNF618 chr9 116750601 + Exonic hg19 ESCA TCGA-L5-A4OS 9 3 Out-of-frame Intra-chr q32 q32 Transcription factor Seq+ 27246 ChimerSeq STARFusion TCGA_RNA-Seq RAF1-C9orf153 RAF1 chr3 12629090 - C9orf153 chr9 88850022 - Exonic hg19 ESCA TCGA-L5-A4OS 5 17 CDS-5'UTR Inter-chr p25.2 TKL:RAF Oncogene q21.33 Seq+ 27247 ChimerSeq STARFusion TCGA_RNA-Seq RAF1-C9orf153 RAF1 chr3 12632297 - C9orf153 chr9 88844544 - Exonic hg19 ESCA TCGA-L5-A4OS 5 17 CDS-5'UTR Inter-chr p25.2 TKL:RAF Oncogene q21.33 Seq+ 27248 ChimerSeq STARFusion TCGA_RNA-Seq SLC43A2-SCARF1 SLC43A2 chr17 1531154 - SCARF1 chr17 1541964 - Exonic hg19 ESCA TCGA-L5-A4OS 7 6 Out-of-frame Intra-chr p13.3 Seq+ 27249 ChimerSeq STARFusion TCGA_RNA-Seq CACNA1D-GNL3 CACNA1D chr3 53804579 + GNL3 chr3 52724961 + Exonic hg19 ESCA TCGA-L5-A4OS 4 11 In-Frame Intra-chr p21.1 p21.1 Seq+ 27250 ChimerSeq STARFusion TCGA_RNA-Seq PHF21A-LEUTX PHF21A chr11 46141275 - LEUTX chr19 40275167 + Exonic hg19 ESCA TCGA-L5-A4OS 5 7 5'UTR-5'UTR Inter-chr p11.2 Transcription factor Transcription factor Seq+ 27251 ChimerSeq STARFusion TCGA_RNA-Seq CDH3-C16orf70 CDH3 chr16 68679653 + C16orf70 chr16 67154015 + Exonic hg19 ESCA TCGA-L5-A4OS 3 13 In-Frame Intra-chr q22.1 q22.1 Seq+ 27252 ChimerSeq STARFusion TCGA_RNA-Seq RAF1-C9orf153 RAF1 chr3 12627180 - C9orf153 chr9 88844544 - Exonic hg19 ESCA TCGA-L5-A4OS 2 17 CDS-5'UTR Inter-chr p25.2 TKL:RAF Oncogene q21.33 Seq+ 27253 ChimerSeq STARFusion TCGA_RNA-Seq EIF3L-NOL12 EIF3L chr22 38274178 + NOL12 chr22 38119192 + Exonic hg19 ESCA TCGA-L5-A4OS 4 8 CDS-3'UTR Intra-chr q13.1 q13.1 27254 ChimerSeq STARFusion TCGA_RNA-Seq EIF3L-TRIOBP EIF3L chr22 38274178 + TRIOBP chr22 38119192 + Exonic hg19 ESCA TCGA-L5-A4OS 4 8 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 27255 ChimerSeq STARFusion TCGA_RNA-Seq ACTL8-ACOX1 ACTL8 chr1 18081999 + ACOX1 chr17 73956456 - Exonic hg19 ESCA TCGA-L5-A4OS 3 8 5'UTR-CDS Inter-chr p36.13 q25.1 Seq+ 27256 ChimerSeq STARFusion TCGA_RNA-Seq XPNPEP2-IGKC XPNPEP2 chrX 128889290 + IGKC chr2 89160433 - Exonic hg19 ESCA TCGA-LN-A49K 15 0 Out-of-frame Inter-chr q26.1 p11.2 27257 ChimerSeq STARFusion TCGA_RNA-Seq XPNPEP2-IGKJ4 XPNPEP2 chrX 128889290 + IGKJ4 chr2 89160433 - Exonic hg19 ESCA TCGA-LN-A49K 15 0 Out-of-frame Inter-chr q26.1 p11.2 27258 ChimerSeq STARFusion TCGA_RNA-Seq YAP1-USP2 YAP1 chr11 101985125 + USP2 chr11 119230944 - Exonic hg19 ESCA TCGA-R6-A6XQ 13 3 Out-of-frame Intra-chr q22.1 Tumor suppressor gene q23.3 Seq+ 27259 ChimerSeq STARFusion TCGA_RNA-Seq S100A9-KRT17 S100A9 chr1 153333413 + KRT17 chr17 39780390 - Exonic hg19 ESCA TCGA-R6-A6XQ 4 7 Out-of-frame Inter-chr q21.3 q21.2 27260 ChimerSeq STARFusion TCGA_RNA-Seq BRD9-STARD3 BRD9 chr5 876216 - STARD3 chr17 37813261 + Exonic hg19 ESCA TCGA-R6-A8W5 1248 321 In-Frame Inter-chr p15.33 q12 Seq+ 27261 ChimerSeq STARFusion TCGA_RNA-Seq AGRN-ZC3H18 AGRN chr1 980903 + ZC3H18 chr16 88664586 + Exonic hg19 ESCA TCGA-R6-A8W5 246 45 In-Frame Inter-chr p36.33 q24.2 Seq+ 27262 ChimerSeq STARFusion TCGA_RNA-Seq LDLR-SMARCA4 LDLR chr19 11218190 + SMARCA4 chr19 11175869 + Exonic hg19 ESCA TCGA-R6-A8W5 244 41 CDS-3'UTR Intra-chr p13.2 p13.2 Oncogene Tumor suppressor gene Seq+ 27263 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-CDK12 STARD3 chr17 37814109 + CDK12 chr17 37627198 + Exonic hg19 ESCA TCGA-R6-A8W5 197 39 Out-of-frame Intra-chr q12 q12 Oncogene 27264 ChimerSeq STARFusion TCGA_RNA-Seq OSBP-GIF OSBP chr11 59361077 - GIF chr11 59597018 - Exonic hg19 ESCA TCGA-R6-A8W5 197 28 In-Frame Intra-chr q12.1 q12.1 Seq+ 27265 ChimerSeq STARFusion TCGA_RNA-Seq KIF13B-C20orf194 KIF13B chr8 29013243 - C20orf194 chr20 3262412 - Exonic hg19 ESCA TCGA-R6-A8W5 117 18 In-Frame Inter-chr p12 p13 Seq+ 27266 ChimerSeq STARFusion TCGA_RNA-Seq ETV4-LSM12 ETV4 chr17 41610042 - LSM12 chr17 42141302 - Exonic hg19 ESCA TCGA-R6-A8W5 111 16 In-Frame Intra-chr q21.31 Oncogene Transcription factor q21.31 Seq+ 27267 ChimerSeq STARFusion TCGA_RNA-Seq SNAPIN-FMNL1 SNAPIN chr1 153632042 + FMNL1 chr17 43317843 + Exonic hg19 ESCA TCGA-R6-A8W5 73 9 In-Frame Inter-chr q21.3 q21.31 Seq+ 27268 ChimerSeq STARFusion TCGA_RNA-Seq XPO5-VARS XPO5 chr6 43492845 - VARS chr6 31747591 - Exonic hg19 ESCA TCGA-R6-A8W5 69 20 In-Frame Intra-chr p21.1 Tumor suppressor gene Seq+ 27269 ChimerSeq STARFusion TCGA_RNA-Seq EPN3-AGPAT3 EPN3 chr17 48616676 + AGPAT3 chr21 45379515 + Exonic hg19 ESCA TCGA-R6-A8W5 66 18 CDS-5'UTR Inter-chr q21.33 q22.3 Seq+ 27270 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-TRAPPC9 AGO2 chr8 141582911 - TRAPPC9 chr8 141381279 - Exonic hg19 ESCA TCGA-R6-A8W5 59 15 Out-of-frame Intra-chr q24.3 q24.3 27271 ChimerSeq STARFusion TCGA_RNA-Seq BRD9-TERT BRD9 chr5 891272 - TERT chr5 1282741 - Exonic hg19 ESCA TCGA-R6-A8W5 44 17 Out-of-frame Intra-chr p15.33 p15.33 Oncogene Seq+ 27272 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-USP49 IGH@ chr14 107012938 - USP49 chr6 41765569 - Exonic hg19 ESCA TCGA-R6-A8W5 47 0 Out-of-frame Inter-chr 32.33 p21.1 27273 ChimerSeq STARFusion TCGA_RNA-Seq FLNB-SLMAP FLNB chr3 57994583 + SLMAP chr3 57875768 + Exonic hg19 ESCA TCGA-R6-A8W5 43 7 In-Frame Intra-chr p14.3 p14.3 Seq+ 27274 ChimerSeq STARFusion TCGA_RNA-Seq SENP6-MYO6 SENP6 chr6 76312292 + MYO6 chr6 76527218 + Exonic hg19 ESCA TCGA-R6-A8W5 42 5 CDS-5'UTR Intra-chr q14.1 q14.1 27275 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-SLCO2B1 UVRAG chr11 75563045 + SLCO2B1 chr11 74873700 + Exonic hg19 ESCA TCGA-R6-A8W5 35 16 In-Frame Intra-chr q13.5 Tumor suppressor gene q13.4 Seq+ 27276 ChimerSeq STARFusion TCGA_RNA-Seq JUP-LEPREL4 JUP chr17 39927899 - LEPREL4 chr17 39968394 - Exonic hg19 ESCA TCGA-R6-A8W5 33 13 CDS-5'UTR Intra-chr q21.2 Tumor suppressor gene 27277 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF28-BTF3 ARHGEF28 chr5 72980709 + BTF3 chr5 72798313 + Exonic hg19 ESCA TCGA-R6-A8W5 33 1 Out-of-frame Intra-chr q13.2 q13.2 27278 ChimerSeq STARFusion TCGA_RNA-Seq WDR59-KARS WDR59 chr16 74982417 - KARS chr16 75670445 - Exonic hg19 ESCA TCGA-R6-A8W5 20 39 In-Frame Intra-chr q23.1 q23.1 Seq+ 27279 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF5-TOMM7 RAPGEF5 chr7 22270465 - TOMM7 chr7 22857667 - Exonic hg19 ESCA TCGA-R6-A8W5 26 6 Out-of-frame Intra-chr p15.3 p15.3 Seq+ 27280 ChimerSeq STARFusion TCGA_RNA-Seq PHF2-WNK2 PHF2 chr9 96339153 + WNK2 chr9 96000515 + Exonic hg19 ESCA TCGA-R6-A8W5 24 4 Out-of-frame Intra-chr q22.31 q22.31 Tumor suppressor gene Seq+ 27281 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD28-COLQ ANKRD28 chr3 15900884 - COLQ chr3 15531144 - Exonic hg19 ESCA TCGA-R6-A8W5 22 2 Out-of-frame Intra-chr p25.1 p25.1 Seq+ 27282 ChimerSeq STARFusion TCGA_RNA-Seq DVL3-RFX6 DVL3 chr3 183873584 + RFX6 chr6 117252494 + Exonic hg19 ESCA TCGA-R6-A8W5 22 2 Out-of-frame Inter-chr q27.1 q22.1 Transcription factor Seq+ 27283 ChimerSeq STARFusion TCGA_RNA-Seq BRD9-TERT BRD9 chr5 889702 - TERT chr5 1282739 - Exonic hg19 ESCA TCGA-R6-A8W5 18 17 In-Frame Intra-chr p15.33 p15.33 Oncogene Seq+ 27284 ChimerSeq STARFusion TCGA_RNA-Seq JUP-LEPREL4 JUP chr17 39927899 - LEPREL4 chr17 39967536 - Exonic hg19 ESCA TCGA-R6-A8W5 19 13 Out-of-frame Intra-chr q21.2 Tumor suppressor gene 27285 ChimerSeq STARFusion TCGA_RNA-Seq IFFO2-UBR4 IFFO2 chr1 19243397 - UBR4 chr1 19528309 - Exonic hg19 ESCA TCGA-R6-A8W5 20 5 In-Frame Intra-chr p36.13 p36.13 Seq+ 27286 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A7-ACIN1 SLC7A7 chr14 23282109 - ACIN1 chr14 23533697 - Exonic hg19 ESCA TCGA-R6-A8W5 18 9 In-Frame Intra-chr q11.2 q11.2 Seq+ 27287 ChimerSeq STARFusion TCGA_RNA-Seq MIR142-IGH@ MIR142 chr17 56409831 - IGH@ chr14 106209407 - Exonic hg19 ESCA TCGA-R6-A8W5 20 0 Out-of-frame Inter-chr q22 Tumor suppressor gene 32.33 27288 ChimerSeq STARFusion TCGA_RNA-Seq MIR142-IGHG1 MIR142 chr17 56409831 - IGHG1 chr14 106209407 - Exonic hg19 ESCA TCGA-R6-A8W5 20 0 Out-of-frame Inter-chr q22 Tumor suppressor gene q32.33 27289 ChimerSeq STARFusion TCGA_RNA-Seq SPOP-TSPEAR SPOP chr17 47755295 - TSPEAR chr21 45953806 - Exonic hg19 ESCA TCGA-R6-A8W5 19 2 5'UTR-CDS Inter-chr q21.33 Oncogene Tumor suppressor gene q22.3 Seq+ 27290 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D1-PGM2 TBC1D1 chr4 37904133 + PGM2 chr4 37831586 + Exonic hg19 ESCA TCGA-R6-A8W5 17 3 In-Frame Intra-chr p14 p14 Seq+ 27291 ChimerSeq STARFusion TCGA_RNA-Seq TNFAIP8-HSD17B4 TNFAIP8 chr5 118604602 + HSD17B4 chr5 118842513 + Exonic hg19 ESCA TCGA-R6-A8W5 16 3 In-Frame Intra-chr q23.1 q23.1 27292 ChimerSeq STARFusion TCGA_RNA-Seq ATAD5-NF1 ATAD5 chr17 29159431 + NF1 chr17 29483001 + Exonic hg19 ESCA TCGA-R6-A8W5 15 0 In-Frame Intra-chr q11.2 q11.2 Oncogene Tumor suppressor gene Seq+ 27293 ChimerSeq STARFusion TCGA_RNA-Seq RCOR1-ISCA2 RCOR1 chr14 103059662 + ISCA2 chr14 74960753 + Exonic hg19 ESCA TCGA-R6-A8W5 14 2 Out-of-frame Intra-chr q32.31 q24.3 Seq+ 27294 ChimerSeq STARFusion TCGA_RNA-Seq ASH2L-MLF1IP ASH2L chr8 37978667 + MLF1IP chr4 185646216 - Exonic hg19 ESCA TCGA-R6-A8W5 12 2 In-Frame Inter-chr p11.23 27295 ChimerSeq STARFusion TCGA_RNA-Seq PSME4-ACYP2 PSME4 chr2 54197680 - ACYP2 chr2 54531825 + Exonic hg19 ESCA TCGA-R6-A8W5 11 3 In-Frame Intra-chr p16.2 p16.2 Seq+ 27296 ChimerSeq STARFusion TCGA_RNA-Seq JUP-LEPREL4 JUP chr17 39927899 - LEPREL4 chr17 39963131 - Exonic hg19 ESCA TCGA-R6-A8W5 7 13 Out-of-frame Intra-chr q21.2 Tumor suppressor gene 27297 ChimerSeq STARFusion TCGA_RNA-Seq TUBA1C-IGFBP4 TUBA1C chr12 49663759 + IGFBP4 chr17 38609237 + Exonic hg19 ESCA TCGA-LN-A49O 97 17 Out-of-frame Inter-chr q13.12 q21.2 Tumor suppressor gene Seq+ 27298 ChimerSeq STARFusion TCGA_RNA-Seq TUBA1A-IGFBP4 TUBA1A chr12 49580093 - IGFBP4 chr17 38609237 + Exonic hg19 ESCA TCGA-LN-A49O 73 17 Out-of-frame Inter-chr q13.12 q21.2 Tumor suppressor gene 27299 ChimerSeq STARFusion TCGA_RNA-Seq SLC24A3-RIN2 SLC24A3 chr20 19261731 + RIN2 chr20 19970650 + Exonic hg19 ESCA TCGA-LN-A49O 35 4 In-Frame Intra-chr p11.23 p11.23 Seq+ 27300 ChimerSeq STARFusion TCGA_RNA-Seq CASP8-STRADB CASP8 chr2 202098835 + STRADB chr2 202334676 + Exonic hg19 ESCA TCGA-LN-A49O 19 9 5'UTR-CDS Intra-chr q33.1 Oncogene Tumor suppressor gene q33.1 Seq+ 27301 ChimerSeq STARFusion TCGA_RNA-Seq CASP8-STRADB CASP8 chr2 202098835 + STRADB chr2 202337678 + Exonic hg19 ESCA TCGA-LN-A49O 15 6 5'UTR-CDS Intra-chr q33.1 Oncogene Tumor suppressor gene q33.1 Seq+ 27302 ChimerSeq STARFusion TCGA_RNA-Seq CASP8-STRADB CASP8 chr2 202123105 + STRADB chr2 202334676 + Exonic hg19 ESCA TCGA-LN-A49O 4 9 Out-of-frame Intra-chr q33.1 Oncogene Tumor suppressor gene q33.1 Seq+ 27303 ChimerSeq STARFusion TCGA_RNA-Seq BRMS1-IGH@ BRMS1 chr11 66105352 - IGH@ chr14 106331653 - Exonic hg19 ESCA TCGA-LN-A49N 42 0 Out-of-frame Inter-chr q13.2 Tumor suppressor gene 32.33 27304 ChimerSeq STARFusion TCGA_RNA-Seq BRMS1-IGHG3 BRMS1 chr11 66105352 - IGHG3 chr14 106331653 - Exonic hg19 ESCA TCGA-LN-A49N 42 0 Out-of-frame Inter-chr q13.2 Tumor suppressor gene 27305 ChimerSeq STARFusion TCGA_RNA-Seq BRMS1-IGHJ1 BRMS1 chr11 66105352 - IGHJ1 chr14 106331653 - Exonic hg19 ESCA TCGA-LN-A49N 42 0 Out-of-frame Inter-chr q13.2 Tumor suppressor gene 27306 ChimerSeq STARFusion TCGA_RNA-Seq BRMS1-IGH@ BRMS1 chr11 66105355 - IGH@ chr14 106330063 - Exonic hg19 ESCA TCGA-LN-A49N 23 0 Out-of-frame Inter-chr q13.2 Tumor suppressor gene 32.33 27307 ChimerSeq STARFusion TCGA_RNA-Seq BRMS1-IGHG3 BRMS1 chr11 66105355 - IGHG3 chr14 106330063 - Exonic hg19 ESCA TCGA-LN-A49N 23 0 Out-of-frame Inter-chr q13.2 Tumor suppressor gene 27308 ChimerSeq STARFusion TCGA_RNA-Seq BRMS1-IGHJ4 BRMS1 chr11 66105351 - IGHJ4 chr14 106330460 - Exonic hg19 ESCA TCGA-LN-A49N 23 0 Out-of-frame Inter-chr q13.2 Tumor suppressor gene 27309 ChimerSeq STARFusion TCGA_RNA-Seq NLN-CTNNA1 NLN chr5 65081657 + CTNNA1 chr5 138266272 + Exonic hg19 ESCA TCGA-LN-A49M 106 30 Out-of-frame Intra-chr q12.3 q31.2 Oncogene Seq+ 27310 ChimerSeq STARFusion TCGA_RNA-Seq KRT5-SPRR1B KRT5 chr12 52913825 - SPRR1B chr1 153005064 + Exonic hg19 ESCA TCGA-LN-A49M 6 13 Out-of-frame Inter-chr q13.13 q21.3 27311 ChimerSeq STARFusion TCGA_RNA-Seq AFF4-SPATA21 AFF4 chr5 132298951 - SPATA21 chr1 16757917 - Exonic hg19 ESCA TCGA-LN-A49M 7 8 5'UTR-5'UTR Inter-chr q31.1 p36.13 Seq+ 27312 ChimerSeq STARFusion TCGA_RNA-Seq AFF4-SPATA21 AFF4 chr5 132298951 - SPATA21 chr1 16754510 - Exonic hg19 ESCA TCGA-LN-A49M 7 8 5'UTR-CDS Inter-chr q31.1 p36.13 Seq+ 27313 ChimerSeq STARFusion TCGA_RNA-Seq AFF4-SPATA21 AFF4 chr5 132298951 - SPATA21 chr1 16752226 - Exonic hg19 ESCA TCGA-LN-A49M 6 8 5'UTR-CDS Inter-chr q31.1 p36.13 Seq+ 27314 ChimerSeq STARFusion TCGA_RNA-Seq KRT5-SPRR1B KRT5 chr12 52914132 - SPRR1B chr1 153005063 + Exonic hg19 ESCA TCGA-LN-A49M 4 12 Out-of-frame Inter-chr q13.13 q21.3 27315 ChimerSeq STARFusion TCGA_RNA-Seq KCMF1-TCF7L1 KCMF1 chr2 85198590 + TCF7L1 chr2 85510618 + Exonic hg19 ESCA TCGA-LN-A49L 184 35 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Oncogene Transcription factor 27316 ChimerSeq STARFusion TCGA_RNA-Seq LRFN3-FXYD7 LRFN3 chr19 36428457 + FXYD7 chr19 35639597 + Exonic hg19 ESCA TCGA-LN-A49L 157 57 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 27317 ChimerSeq STARFusion TCGA_RNA-Seq NEDD8-NRL NEDD8 chr14 24701456 - NRL chr14 24550777 - Exonic hg19 ESCA TCGA-LN-A49L 111 109 In-Frame Intra-chr q12 q12 Transcription factor Seq+ 27318 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-SDC3 PUM1 chr1 31532051 - SDC3 chr1 31351587 - Exonic hg19 ESCA TCGA-LN-A49L 115 41 In-Frame Intra-chr p35.2 p35.2 Seq+ 27319 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-RHBDD2 PTPN12 chr7 77166962 + RHBDD2 chr7 75510683 + Exonic hg19 ESCA TCGA-LN-A49L 86 61 CDS-5'UTR Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 27320 ChimerSeq STARFusion TCGA_RNA-Seq BRCC3-FAM50A BRCC3 chrX 154306978 + FAM50A chrX 153673981 + Exonic hg19 ESCA TCGA-LN-A49L 57 24 Out-of-frame Intra-chr q28 q28 Seq+ 27321 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-RHBDD2 PTPN12 chr7 77166962 + RHBDD2 chr7 75511147 + Exonic hg19 ESCA TCGA-LN-A49L 32 61 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 27322 ChimerSeq STARFusion TCGA_RNA-Seq PSMD5-CDK5RAP2 PSMD5 chr9 123593609 - CDK5RAP2 chr9 123308068 - Exonic hg19 ESCA TCGA-LN-A49L 41 15 In-Frame Intra-chr q33.2 q33.2 Seq+ 27323 ChimerSeq STARFusion TCGA_RNA-Seq NEDD8-NRL NEDD8 chr14 24700858 - NRL chr14 24550777 - Exonic hg19 ESCA TCGA-LN-A49L 13 109 Out-of-frame Intra-chr q12 q12 Transcription factor Seq+ 27324 ChimerSeq STARFusion TCGA_RNA-Seq CAMK1D-ECHDC3 CAMK1D chr10 12391909 + ECHDC3 chr10 11789348 + Exonic hg19 ESCA TCGA-LN-A49L 25 10 In-Frame Intra-chr p13 p14 Seq+ 27325 ChimerSeq STARFusion TCGA_RNA-Seq CHD7-KAT6A CHD7 chr8 61591641 + KAT6A chr8 41845081 - Exonic hg19 ESCA TCGA-LN-A49L 24 5 5'UTR-CDS Intra-chr q12.2 p11.21 Oncogene Seq+ 27326 ChimerSeq STARFusion TCGA_RNA-Seq N4BP1-ABCC12 N4BP1 chr16 48594665 - ABCC12 chr16 48167746 - Exonic hg19 ESCA TCGA-LN-A49L 22 10 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 27327 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-SDC3 PUM1 chr1 31532146 - SDC3 chr1 31351587 - Exonic hg19 ESCA TCGA-LN-A49L 14 41 In-Frame Intra-chr p35.2 p35.2 Seq+ 27328 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-SDC3 PUM1 chr1 31528160 - SDC3 chr1 31351587 - Exonic hg19 ESCA TCGA-LN-A49L 12 41 Out-of-frame Intra-chr p35.2 p35.2 Seq+ 27329 ChimerSeq STARFusion TCGA_RNA-Seq ZNF740-SEPT9 ZNF740 chr12 53584282 + SEPT9 chr17 75494789 + Exonic hg19 ESCA TCGA-LN-A49L 20 0 Out-of-frame Inter-chr q13.13 Transcription factor 27330 ChimerSeq STARFusion TCGA_RNA-Seq GRHL2-NACAP1 GRHL2 chr8 102505017 + NACAP1 chr8 102379851 + Exonic hg19 ESCA TCGA-LN-A49L 17 11 CDS-5'UTR Intra-chr q22.3 Transcription factor q22.3 27331 ChimerSeq STARFusion TCGA_RNA-Seq GRHL2-NACAP1 GRHL2 chr8 102505077 + NACAP1 chr8 102379851 + Exonic hg19 ESCA TCGA-LN-A49L 13 11 Out-of-frame Intra-chr q22.3 Transcription factor q22.3 27332 ChimerSeq STARFusion TCGA_RNA-Seq ATAD1-PTEN ATAD1 chr10 89574195 - PTEN chr10 89685270 + Exonic hg19 ESCA TCGA-LN-A49L 12 8 Out-of-frame Intra-chr q23.31 Oncogene Tumor suppressor gene Seq+ 27333 ChimerSeq STARFusion TCGA_RNA-Seq GALNT11-ABCB8 GALNT11 chr7 151818989 + ABCB8 chr7 150730692 + Exonic hg19 ESCA TCGA-LN-A49L 12 6 3'UTR-CDS Intra-chr q36.1 q36.1 Seq+ 27334 ChimerSeq STARFusion TCGA_RNA-Seq STAG1-MSL2 STAG1 chr3 136471037 - MSL2 chr3 135871580 - Exonic hg19 ESCA TCGA-LN-A49L 12 4 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 27335 ChimerSeq STARFusion TCGA_RNA-Seq TKT-CENPF TKT chr3 53274267 - CENPF chr1 214832214 + Exonic hg19 ESCA TCGA-R6-A8W8 79 14 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q41 Seq+ 27336 ChimerSeq STARFusion TCGA_RNA-Seq CASP7-UQCRB CASP7 chr10 115490446 + UQCRB chr8 97247765 - Exonic hg19 ESCA TCGA-R6-A8W8 41 15 Out-of-frame Inter-chr q25.3 q22.1 Seq+ 27337 ChimerSeq STARFusion TCGA_RNA-Seq PAPD7-SRD5A1 PAPD7 chr5 6714812 + SRD5A1 chr5 6662929 + Exonic hg19 ESCA TCGA-R6-A8W8 36 6 5'UTR-3'UTR Intra-chr p15.31 p15.31 Seq+ 27338 ChimerSeq STARFusion TCGA_RNA-Seq AP2B1-GAS2L2 AP2B1 chr17 33984810 + GAS2L2 chr17 34077337 - Exonic hg19 ESCA TCGA-R6-A8W8 18 5 Out-of-frame Intra-chr q12 q12 Seq+ 27339 ChimerSeq STARFusion TCGA_RNA-Seq ZNF318-FOXP4 ZNF318 chr6 43316062 - FOXP4 chr6 41533483 + Exonic hg19 ESCA TCGA-R6-A8W8 13 3 CDS-5'UTR Intra-chr p21.1 Transcription factor p21.1 Oncogene Transcription factor Seq+ 27340 ChimerSeq STARFusion TCGA_RNA-Seq NRXN3-C2 NRXN3 chr14 79780492 + C2 chr6 31901387 + Exonic hg19 ESCA TCGA-R6-A8W8 10 3 Out-of-frame Inter-chr q24.3 p21.33 27341 ChimerSeq STARFusion TCGA_RNA-Seq NRXN3-CFB NRXN3 chr14 79780492 + CFB chr6 31901387 + Exonic hg19 ESCA TCGA-R6-A8W8 10 3 Out-of-frame Inter-chr q24.3 27342 ChimerSeq STARFusion TCGA_RNA-Seq NRXN3-CFB NRXN3 chr14 79780492 + CFB chr6 31901387 + Exonic hg19 ESCA TCGA-R6-A8W8 10 2 Out-of-frame Inter-chr q24.3 27343 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-AVIL TBL1XR1 chr3 176738552 - AVIL chr12 58199948 - Exonic hg19 ESCA TCGA-LN-A49Y 9 0 Out-of-frame Inter-chr q26.32 q14.1 27344 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB7C-NCL ZBTB7C chr18 45566991 - NCL chr2 232325277 - Exonic hg19 ESCA TCGA-LN-A49X 30 0 Out-of-frame Inter-chr q21.1 Tumor suppressor gene Transcription factor q37.1 27345 ChimerSeq STARFusion TCGA_RNA-Seq C16orf59-CCNF C16orf59 chr16 2512480 + CCNF chr16 2508162 + Exonic hg19 ESCA TCGA-LN-A49X 12 9 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 27346 ChimerSeq STARFusion TCGA_RNA-Seq STK17A-HECW1 STK17A chr7 43647999 + HECW1 chr7 43580762 + Exonic hg19 ESCA TCGA-LN-A49X 12 4 Out-of-frame Intra-chr p13 p14.1 Seq+ 27347 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-ANXA13 PVT1 chr8 128806980 + ANXA13 chr8 124724993 - Exonic hg19 ESCA TCGA-JY-A6F8 86 54 5'UTR-CDS Intra-chr q24.21 q24.13 Seq+ 27348 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0247-SLC39A9 KIAA0247 chr14 70170309 + SLC39A9 chr14 69908786 + Exonic hg19 ESCA TCGA-JY-A6F8 58 29 In-Frame Intra-chr q24.1 Seq+ 27349 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-ANXA13 PVT1 chr8 128808254 + ANXA13 chr8 124724993 - Exonic hg19 ESCA TCGA-JY-A6F8 40 53 5'UTR-CDS Intra-chr q24.21 q24.13 Seq+ 27350 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-ANXA13 PVT1 chr8 128806980 + ANXA13 chr8 124714976 - Exonic hg19 ESCA TCGA-JY-A6F8 36 53 5'UTR-CDS Intra-chr q24.21 q24.13 Seq+ 27351 ChimerSeq STARFusion TCGA_RNA-Seq FAF1-TESK2 FAF1 chr1 51121114 - TESK2 chr1 45821121 - Exonic hg19 ESCA TCGA-JY-A6F8 44 8 In-Frame Intra-chr p32.3 p34.1 TKL:LISK Seq+ 27352 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0247-SLC39A9 KIAA0247 chr14 70125430 + SLC39A9 chr14 69908786 + Exonic hg19 ESCA TCGA-JY-A6F8 22 29 In-Frame Intra-chr q24.1 Seq+ 27353 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-ANXA13 PVT1 chr8 128808317 + ANXA13 chr8 124724993 - Exonic hg19 ESCA TCGA-JY-A6F8 15 53 5'UTR-CDS Intra-chr q24.21 q24.13 Seq+ 27354 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-TRAP1 CREBBP chr16 3929833 - TRAP1 chr16 3739138 - Exonic hg19 ESCA TCGA-LN-A49S 54 5 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 27355 ChimerSeq STARFusion TCGA_RNA-Seq CNBP-UNC93B6 CNBP chr3 128902619 - UNC93B6 chr11 71316395 + Exonic hg19 ESCA TCGA-LN-A49R 69 8 Out-of-frame Inter-chr q21.3 q13.4 Seq+ 27356 ChimerSeq STARFusion TCGA_RNA-Seq THA1P-TP63 THA1P chr17 76246685 - TP63 chr3 189604183 + Exonic hg19 ESCA TCGA-LN-A49R 23 0 Out-of-frame Inter-chr q25.3 q28 Tumor suppressor gene Transcription factor Seq+ 27357 ChimerSeq STARFusion TCGA_RNA-Seq RNF217-NKAIN2 RNF217 chr6 125284572 + NKAIN2 chr6 125112485 + Exonic hg19 ESCA TCGA-LN-A49R 20 2 5'UTR-CDS Intra-chr q22.31 q22.31 Seq+ 27358 ChimerSeq STARFusion TCGA_RNA-Seq CNBP-UNC93B6 CNBP chr3 128902619 - UNC93B6 chr11 71318338 + Exonic hg19 ESCA TCGA-LN-A49R 17 8 Out-of-frame Inter-chr q21.3 q13.4 Seq+ 27359 ChimerSeq STARFusion TCGA_RNA-Seq KIF16B-CCDC178 KIF16B chr20 16352310 - CCDC178 chr18 30554645 - Exonic hg19 ESCA TCGA-LN-A49P 16 3 Out-of-frame Inter-chr p12.1 q12.1 Seq+ 27360 ChimerSeq STARFusion TCGA_RNA-Seq CLPB-GOLGA8A CLPB chr11 72069924 - GOLGA8A chr15 34699936 - Exonic hg19 ESCA TCGA-LN-A49W 33 6 CDS-3'UTR Inter-chr q13.4 q14 Seq+ 27361 ChimerSeq STARFusion TCGA_RNA-Seq SDK1-NUPR1L SDK1 chr7 3681737 + NUPR1L chr7 56182590 - Exonic hg19 ESCA TCGA-LN-A49W 28 2 Out-of-frame Intra-chr p22.2 27362 ChimerSeq STARFusion TCGA_RNA-Seq SLTM-LPHN1 SLTM chr15 59224555 - LPHN1 chr19 14288556 - Exonic hg19 ESCA TCGA-LN-A49W 23 1 In-Frame Inter-chr q22.1 Seq+ 27363 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106209411 - Exonic hg19 ESCA TCGA-LN-A49W 20 0 Out-of-frame Inter-chr q21.2 32.33 27364 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076851 + IGHG1 chr14 106209411 - Exonic hg19 ESCA TCGA-LN-A49W 20 0 Out-of-frame Inter-chr q21.2 q32.33 27365 ChimerSeq STARFusion TCGA_RNA-Seq CNOT10-CMTM7 CNOT10 chr3 32758729 + CMTM7 chr3 32493884 + Exonic hg19 ESCA TCGA-LN-A49V 73 6 In-Frame Intra-chr p22.3 p22.3 Seq+ 27366 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H3-LY6H ZC3H3 chr8 144547887 - LY6H chr8 144241126 - Exonic hg19 ESCA TCGA-LN-A49V 48 3 Out-of-frame Intra-chr Seq+ 27367 ChimerSeq STARFusion TCGA_RNA-Seq MRPL48-PLEKHB1 MRPL48 chr11 73519395 + PLEKHB1 chr11 73360057 + Exonic hg19 ESCA TCGA-LN-A49V 46 3 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 27368 ChimerSeq STARFusion TCGA_RNA-Seq DPH6-AQR DPH6 chr15 35830475 - AQR chr15 35149307 - Exonic hg19 ESCA TCGA-LN-A49V 46 2 Out-of-frame Intra-chr q14 q14 Seq+ 27369 ChimerSeq STARFusion TCGA_RNA-Seq ABI2-PPP1R1C ABI2 chr2 204193354 + PPP1R1C chr2 182926169 + Exonic hg19 ESCA TCGA-LN-A49V 36 3 Out-of-frame Intra-chr q33.2 Tumor suppressor gene q31.3 Seq+ 27370 ChimerSeq STARFusion TCGA_RNA-Seq SH3GLB2-WDR34 SH3GLB2 chr9 131771385 - WDR34 chr9 131403218 - Exonic hg19 ESCA TCGA-LN-A49V 12 3 In-Frame Intra-chr q34.11 q34.11 Seq+ 27371 ChimerSeq STARFusion TCGA_RNA-Seq BIRC6-TTC27 BIRC6 chr2 32695369 + TTC27 chr2 33002949 + Exonic hg19 ESCA TCGA-LN-A49U 14 6 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 27372 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-GSAP PTPN12 chr7 77221573 + GSAP chr7 77035422 - Exonic hg19 ESCA TCGA-LN-A49U 10 7 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 27373 ChimerSeq STARFusion TCGA_RNA-Seq POR-RHBDD2 POR chr7 75544497 + RHBDD2 chr7 75510683 + Exonic hg19 ESCA TCGA-LN-A49U 8 4 5'UTR-5'UTR Intra-chr q11.23 q11.23 Seq+ 27374 ChimerSeq STARFusion TCGA_RNA-Seq COL3A1-KRT6A COL3A1 chr2 189876400 + KRT6A chr12 52884696 - Exonic hg19 ESCA TCGA-LN-A49U 3 12 Out-of-frame Inter-chr q32.2 q13.13 27375 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-IFI6 WASF2 chr1 27816497 - IFI6 chr1 27995857 - Exonic hg19 ESCA TCGA-VR-A8EX 46 9 5'UTR-5'UTR Intra-chr p36.11 p35.3 Seq+ 27376 ChimerSeq STARFusion TCGA_RNA-Seq COX6C-VPS13B COX6C chr8 100905867 - VPS13B chr8 100883676 + Exonic hg19 ESCA TCGA-VR-A8EX 24 1 5'UTR-CDS Intra-chr q22.2 q22.2 Seq+ 27377 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D22A-TRMU TBC1D22A chr22 47393605 + TRMU chr22 46752739 + Exonic hg19 ESCA TCGA-VR-A8EX 7 6 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 27378 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC2-CUX1 DNAJC2 chr7 102978183 - CUX1 chr7 101870647 + Exonic hg19 ESCA TCGA-VR-A8EX 7 3 In-Frame Intra-chr q22.1 q22.1 Tumor suppressor gene Transcription factor 27379 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-YARS PUM1 chr1 31532051 - YARS chr1 33276658 - Exonic hg19 ESCA TCGA-JY-A6FH 211 88 In-Frame Intra-chr p35.2 p35.1 Seq+ 27380 ChimerSeq STARFusion TCGA_RNA-Seq U2AF2-KIR3DL2 U2AF2 chr19 56170711 + KIR3DL2 chr19 55363453 + Exonic hg19 ESCA TCGA-JY-A6FH 94 34 Out-of-frame Intra-chr q13.42 Seq+ 27381 ChimerSeq STARFusion TCGA_RNA-Seq TAX1BP1-CHN2 TAX1BP1 chr7 27827222 + CHN2 chr7 29394241 + Exonic hg19 ESCA TCGA-JY-A6FH 62 16 Out-of-frame Intra-chr p15.2 p14.3 Seq+ 27382 ChimerSeq STARFusion TCGA_RNA-Seq DRAM1-SYCP3 DRAM1 chr12 102271698 + SYCP3 chr12 102128822 - Exonic hg19 ESCA TCGA-JY-A6FH 52 19 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 27383 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R13B-L2HGDH PPP1R13B chr14 104313636 - L2HGDH chr14 50750751 - Exonic hg19 ESCA TCGA-JY-A6FH 44 22 In-Frame Intra-chr q32.33 q21.3 Seq+ 27384 ChimerSeq STARFusion TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105561040 - OBFC1 chr10 105677414 - Exonic hg19 ESCA TCGA-JY-A6FH 40 19 CDS-5'UTR Intra-chr q24.33 Seq+ 27385 ChimerSeq STARFusion TCGA_RNA-Seq CYB561D2-SLC38A3 CYB561D2 chr3 50388991 + SLC38A3 chr3 50251582 + Exonic hg19 ESCA TCGA-JY-A6FH 37 30 CDS-5'UTR Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 27386 ChimerSeq STARFusion TCGA_RNA-Seq U2AF2-KIR3DL1 U2AF2 chr19 56170711 + KIR3DL1 chr19 55329770 + Exonic hg19 ESCA TCGA-JY-A6FH 38 3 Out-of-frame Intra-chr q13.42 Seq+ 27387 ChimerSeq STARFusion TCGA_RNA-Seq IQGAP1-NGRN IQGAP1 chr15 90934105 + NGRN chr15 90814420 + Exonic hg19 ESCA TCGA-JY-A6FH 35 13 In-Frame Intra-chr q26.1 q26.1 Seq+ 27388 ChimerSeq STARFusion TCGA_RNA-Seq CYB561D2-SLC38A3 CYB561D2 chr3 50389477 + SLC38A3 chr3 50251582 + Exonic hg19 ESCA TCGA-JY-A6FH 30 30 CDS-5'UTR Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 27389 ChimerSeq STARFusion TCGA_RNA-Seq URI1-PDCD5 URI1 chr19 30462134 + PDCD5 chr19 33073101 + Exonic hg19 ESCA TCGA-JY-A6FH 27 24 Out-of-frame Intra-chr q12 q13.11 Tumor suppressor gene Seq+ 27390 ChimerSeq STARFusion TCGA_RNA-Seq U2AF2-KIR3DL2 U2AF2 chr19 56170711 + KIR3DL2 chr19 55329770 + Exonic hg19 ESCA TCGA-JY-A6FH 23 33 CDS-5'UTR Intra-chr q13.42 Seq+ 27391 ChimerSeq STARFusion TCGA_RNA-Seq AFAP1L2-GLUD1P2 AFAP1L2 chr10 116164199 - GLUD1P2 chr10 48966878 + Exonic hg19 ESCA TCGA-JY-A6FH 29 5 Out-of-frame Intra-chr q25.3 Tumor suppressor gene q11.22 Seq+ 27392 ChimerSeq STARFusion TCGA_RNA-Seq SMARCA4-SLC44A2 SMARCA4 chr19 11107220 + SLC44A2 chr19 10745432 + Exonic hg19 ESCA TCGA-JY-A6FH 25 11 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 27393 ChimerSeq STARFusion TCGA_RNA-Seq RERE-ENO1 RERE chr1 8877219 - ENO1 chr1 8934976 - Exonic hg19 ESCA TCGA-JY-A6FH 26 6 5'UTR-5'UTR Intra-chr p36.23 p36.23 Seq+ 27394 ChimerSeq STARFusion TCGA_RNA-Seq URI1-PDCD5 URI1 chr19 30433571 + PDCD5 chr19 33073101 + Exonic hg19 ESCA TCGA-JY-A6FH 21 17 In-Frame Intra-chr q12 q13.11 Tumor suppressor gene Seq+ 27395 ChimerSeq STARFusion TCGA_RNA-Seq NELFB-FBXW5 NELFB chr9 140161798 + FBXW5 chr9 139836136 - Exonic hg19 ESCA TCGA-JY-A6FH 20 14 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 27396 ChimerSeq STARFusion TCGA_RNA-Seq TYW1-DMTF1 TYW1 chr7 66582605 + DMTF1 chr7 86795799 + Exonic hg19 ESCA TCGA-JY-A6FH 21 2 Out-of-frame Intra-chr q11.21 q21.12 Tumor suppressor gene Transcription factor Seq+ 27397 ChimerSeq STARFusion TCGA_RNA-Seq SLC16A9-CCDC6 SLC16A9 chr10 61469237 - CCDC6 chr10 61552869 - Exonic hg19 ESCA TCGA-JY-A6FH 18 11 5'UTR-CDS Intra-chr q21.2 q21.2 Seq+ 27398 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHG5-KHDRBS1 PLEKHG5 chr1 6579505 - KHDRBS1 chr1 32495899 + Exonic hg19 ESCA TCGA-JY-A6FH 16 10 In-Frame Intra-chr p36.31 Oncogene p35.2 Seq+ 27399 ChimerSeq STARFusion TCGA_RNA-Seq LRRC37B-RAB11FIP4 LRRC37B chr17 30335151 + RAB11FIP4 chr17 29844669 + Exonic hg19 ESCA TCGA-JY-A6FH 16 3 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 27400 ChimerSeq STARFusion TCGA_RNA-Seq RABEP1-ZFP3 RABEP1 chr17 5235447 + ZFP3 chr17 4994792 + Exonic hg19 ESCA TCGA-JY-A6FH 15 3 CDS-5'UTR Intra-chr p13.2 p13.2 Transcription factor Seq+ 27401 ChimerSeq STARFusion TCGA_RNA-Seq CYB561D2-SLC38A3 CYB561D2 chr3 50391133 + SLC38A3 chr3 50251582 + Exonic hg19 ESCA TCGA-JY-A6FH 8 30 CDS-5'UTR Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 27402 ChimerSeq STARFusion TCGA_RNA-Seq FAM131B-GIPC1 FAM131B chr7 143059852 - GIPC1 chr19 14603726 - Exonic hg19 ESCA TCGA-JY-A6FH 15 0 Out-of-frame Inter-chr q34 p13.12 27403 ChimerSeq STARFusion TCGA_RNA-Seq NELFB-FBXW5 NELFB chr9 140163465 + FBXW5 chr9 139836672 - Exonic hg19 ESCA TCGA-JY-A6FH 4 14 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 27404 ChimerSeq STARFusion TCGA_RNA-Seq RPL13P12-PNMA2 RPL13P12 chr17 17286669 - PNMA2 chr8 26364477 - Exonic hg19 ESCA TCGA-JY-A6FG 20 0 Out-of-frame Inter-chr p21.2 27405 ChimerSeq STARFusion TCGA_RNA-Seq EEA1-LRRIQ1 EEA1 chr12 93322819 - LRRIQ1 chr12 85497782 + Exonic hg19 ESCA TCGA-JY-A6FE 30 10 Out-of-frame Intra-chr q22 Transcription factor q21.31 Seq+ 27406 ChimerSeq STARFusion TCGA_RNA-Seq RPL13P12-PNMA2 RPL13P12 chr17 17286669 - PNMA2 chr8 26364477 - Exonic hg19 ESCA TCGA-JY-A6FE 32 0 Out-of-frame Inter-chr p21.2 27407 ChimerSeq STARFusion TCGA_RNA-Seq FTO-ZNF423 FTO chr16 53738141 + ZNF423 chr16 49559405 - Exonic hg19 ESCA TCGA-JY-A6FE 24 4 Out-of-frame Intra-chr q12.2 q12.1 Transcription factor Seq+ 27408 ChimerSeq STARFusion TCGA_RNA-Seq DENND5A-SCUBE2 DENND5A chr11 9286508 - SCUBE2 chr11 9144441 - Exonic hg19 ESCA TCGA-JY-A6FE 15 6 CDS-5'UTR Intra-chr p15.4 p15.4 Tumor suppressor gene Seq+ 27409 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF3-KREMEN1 ZNRF3 chr22 29383189 + KREMEN1 chr22 29490246 + Exonic hg19 ESCA TCGA-JY-A6FE 13 8 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 27410 ChimerSeq STARFusion TCGA_RNA-Seq IQGAP1-ZNF774 IQGAP1 chr15 90934105 + ZNF774 chr15 90897874 + Exonic hg19 ESCA TCGA-JY-A6FE 12 7 CDS-5'UTR Intra-chr q26.1 q26.1 Transcription factor Seq+ 27411 ChimerSeq STARFusion TCGA_RNA-Seq DSP-LY86 DSP chr6 7542318 + LY86 chr6 6649858 + Exonic hg19 ESCA TCGA-JY-A6FD 1279 560 Out-of-frame Intra-chr p24.3 Tumor suppressor gene p25.1 Seq+ 27412 ChimerSeq STARFusion TCGA_RNA-Seq DSP-LY86 DSP chr6 7542318 + LY86 chr6 6649863 + Exonic hg19 ESCA TCGA-JY-A6FD 302 554 Out-of-frame Intra-chr p24.3 Tumor suppressor gene p25.1 Seq+ 27413 ChimerSeq STARFusion TCGA_RNA-Seq NOV-ENPP2 NOV chr8 120431585 + ENPP2 chr8 120606100 - Exonic hg19 ESCA TCGA-JY-A6FD 374 118 In-Frame Intra-chr q24.12 Tumor suppressor gene q24.12 Seq+ 27414 ChimerSeq STARFusion TCGA_RNA-Seq KMT2D-ARF3 KMT2D chr12 49443465 - ARF3 chr12 49334971 - Exonic hg19 ESCA TCGA-JY-A6FD 98 24 Out-of-frame Intra-chr q13.12 Oncogene q13.12 Seq+ 27415 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R2A-ATCAY PPP2R2A chr8 26151256 + ATCAY chr19 3913756 + Exonic hg19 ESCA TCGA-JY-A6FD 43 11 Out-of-frame Inter-chr p21.2 p13.3 Seq+ 27416 ChimerSeq STARFusion TCGA_RNA-Seq JUP-LEPREL4 JUP chr17 39911573 - LEPREL4 chr17 39963131 - Exonic hg19 ESCA TCGA-JY-A6FD 29 13 3'UTR-CDS Intra-chr q21.2 Tumor suppressor gene 27417 ChimerSeq STARFusion TCGA_RNA-Seq JUP-LEPREL4 JUP chr17 39911982 - LEPREL4 chr17 39963131 - Exonic hg19 ESCA TCGA-JY-A6FD 26 13 3'UTR-CDS Intra-chr q21.2 Tumor suppressor gene 27418 ChimerSeq STARFusion TCGA_RNA-Seq CAPG-GGCX CAPG chr2 85626327 - GGCX chr2 85781429 - Exonic hg19 ESCA TCGA-JY-A6FD 15 11 Out-of-frame Intra-chr p11.2 Tumor suppressor gene p11.2 Seq+ 27419 ChimerSeq STARFusion TCGA_RNA-Seq IL4I1-DYRK1B IL4I1 chr19 50430951 - DYRK1B chr19 40322608 - Exonic hg19 ESCA TCGA-JY-A6FD 15 8 5'UTR-5'UTR Intra-chr q13.33 CMGC:DYRK Seq+ 27420 ChimerSeq STARFusion TCGA_RNA-Seq NUP62-DYRK1B NUP62 chr19 50430951 - DYRK1B chr19 40322608 - Exonic hg19 ESCA TCGA-JY-A6FD 15 8 5'UTR-5'UTR Intra-chr q13.33 CMGC:DYRK Seq+ 27421 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R37-RTN2 PPP1R37 chr19 45646891 + RTN2 chr19 45989371 - Exonic hg19 ESCA TCGA-JY-A6FD 10 11 In-Frame Intra-chr q13.32 q13.32 Seq+ 27422 ChimerSeq STARFusion TCGA_RNA-Seq ATP2C1-NEK11 ATP2C1 chr3 130613619 + NEK11 chr3 130871232 + Exonic hg19 ESCA TCGA-JY-A6FD 7 13 Out-of-frame Intra-chr q22.1 q22.1 Other:NEK Seq+ 27423 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R37-RTN2 PPP1R37 chr19 45645716 + RTN2 chr19 45989371 - Exonic hg19 ESCA TCGA-JY-A6FD 7 11 Out-of-frame Intra-chr q13.32 q13.32 Seq+ 27424 ChimerSeq STARFusion TCGA_RNA-Seq CAPG-GGCX CAPG chr2 85626290 - GGCX chr2 85781480 - Exonic hg19 ESCA TCGA-JY-A6FD 6 11 Out-of-frame Intra-chr p11.2 Tumor suppressor gene p11.2 Seq+ 27425 ChimerSeq STARFusion TCGA_RNA-Seq ATP2C1-NEK11 ATP2C1 chr3 130613181 + NEK11 chr3 130871232 + Exonic hg19 ESCA TCGA-JY-A6FD 5 13 5'UTR-CDS Intra-chr q22.1 q22.1 Other:NEK Seq+ 27426 ChimerSeq STARFusion TCGA_RNA-Seq CAPG-GGCX CAPG chr2 85626358 - GGCX chr2 85781429 - Exonic hg19 ESCA TCGA-JY-A6FD 3 11 Out-of-frame Intra-chr p11.2 Tumor suppressor gene p11.2 Seq+ 27427 ChimerSeq STARFusion TCGA_RNA-Seq ATP2C1-NEK11 ATP2C1 chr3 130613619 + NEK11 chr3 130881252 + Exonic hg19 ESCA TCGA-JY-A6FD 2 13 Out-of-frame Intra-chr q22.1 q22.1 Other:NEK Seq+ 27428 ChimerSeq STARFusion TCGA_RNA-Seq CNST-SCCPDH CNST chr1 246755243 + SCCPDH chr1 246890194 + Exonic hg19 ESCA TCGA-JY-A6FB 72 35 In-Frame Intra-chr q44 q44 27429 ChimerSeq STARFusion TCGA_RNA-Seq VEZF1-KRT222 VEZF1 chr17 56065440 - KRT222 chr17 38816459 - Exonic hg19 ESCA TCGA-JY-A6FB 70 31 In-Frame Intra-chr q22 Transcription factor q21.2 Seq+ 27430 ChimerSeq STARFusion TCGA_RNA-Seq VEZF1-KRT222 VEZF1 chr17 56065440 - KRT222 chr17 38816459 - Exonic hg19 ESCA TCGA-JY-A6FB 70 31 In-Frame Intra-chr q22 Transcription factor q21.2 Seq+ 27431 ChimerSeq STARFusion TCGA_RNA-Seq CD2AP-FAM69A CD2AP chr6 47445984 + FAM69A chr1 93341987 - Exonic hg19 ESCA TCGA-JY-A6FB 31 1 Out-of-frame Inter-chr p12.3 p22.1 Seq+ 27432 ChimerSeq STARFusion TCGA_RNA-Seq FOXP4-UBR2 FOXP4 chr6 41555635 + UBR2 chr6 42573459 + Exonic hg19 ESCA TCGA-JY-A6FB 19 10 In-Frame Intra-chr p21.1 Oncogene Transcription factor p21.1 Seq+ 27433 ChimerSeq STARFusion TCGA_RNA-Seq UBR1-TGM5 UBR1 chr15 43290366 - TGM5 chr15 43552777 - Exonic hg19 ESCA TCGA-JY-A6FB 11 5 In-Frame Intra-chr q15.2 q15.2 Seq+ 27434 ChimerSeq STARFusion TCGA_RNA-Seq CD2AP-USP49 CD2AP chr6 47548636 + USP49 chr6 41774749 - Exonic hg19 ESCA TCGA-JY-A6FB 8 3 CDS-5'UTR Intra-chr p12.3 p21.1 Seq+ 27435 ChimerSeq STARFusion TCGA_RNA-Seq MBTPS1-TAF1C MBTPS1 chr16 84120963 - TAF1C chr16 84213950 - Exonic hg19 ESCA TCGA-JY-A6FA 178 80 In-Frame Intra-chr q24.1 q24.1 Seq+ 27436 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-PSMB3 ERBB2 chr17 37876087 + PSMB3 chr17 36916684 + Exonic hg19 ESCA TCGA-JY-A6FA 24 6 In-Frame Intra-chr q12 Oncogene Seq+ 27437 ChimerSeq STARFusion TCGA_RNA-Seq TOP1-LPIN3 TOP1 chr20 39658095 + LPIN3 chr20 39974436 + Exonic hg19 ESCA TCGA-JY-A6FA 13 4 CDS-5'UTR Intra-chr q12 Oncogene q12 Seq+ 27438 ChimerSeq STARFusion TCGA_RNA-Seq CDH13-WFDC1 CDH13 chr16 83520260 + WFDC1 chr16 84358025 + Exonic hg19 ESCA TCGA-JY-A6FA 13 3 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q24.1 Tumor suppressor gene Seq+ 27439 ChimerSeq STARFusion TCGA_RNA-Seq AR-TMEM185A AR chrX 66766404 + TMEM185A chrX 148713437 - Exonic hg19 ESCA TCGA-JY-A6FA 13 0 Out-of-frame Intra-chr q12 Oncogene Tumor suppressor gene Transcription factor q28 27440 ChimerSeq STARFusion TCGA_RNA-Seq CEP192-PIGU CEP192 chr18 13001581 + PIGU chr20 33176411 - Exonic hg19 ESCA TCGA-R6-A8WG 20 6 Out-of-frame Inter-chr p11.21 q11.22 Seq+ 27441 ChimerSeq STARFusion TCGA_RNA-Seq RNF123-CHMP2B RNF123 chr3 49751607 + CHMP2B chr3 87294864 + Exonic hg19 ESCA TCGA-R6-A8WG 8 7 Out-of-frame Intra-chr p21.31 p11.2 Seq+ 27442 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL3-ANO1 OSBPL3 chr7 25019505 - ANO1 chr11 69978025 + Exonic hg19 ESCA TCGA-VR-A8EU 235 97 5'UTR-5'UTR Inter-chr p15.3 q13.3 Seq+ 27443 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-TRGV5 CTTN chr11 70256066 + TRGV5 chr7 38389266 - Exonic hg19 ESCA TCGA-VR-A8EU 33 23 Out-of-frame Inter-chr q13.3 p14.1 Seq+ 27444 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-TRGV5 CTTN chr11 70256066 + TRGV5 chr7 38389442 - Exonic hg19 ESCA TCGA-VR-A8EU 25 12 Out-of-frame Inter-chr q13.3 p14.1 Seq+ 27445 ChimerSeq STARFusion TCGA_RNA-Seq ABCA12-SGPP2 ABCA12 chr2 215890397 - SGPP2 chr2 223339287 + Exonic hg19 ESCA TCGA-VR-A8EU 23 8 In-Frame Intra-chr q35 q36.1 Seq+ 27446 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1109-ADAD1 KIAA1109 chr4 123118429 + ADAD1 chr4 123301217 + Exonic hg19 ESCA TCGA-VR-A8EU 18 9 CDS-5'UTR Intra-chr q27 q27 Seq+ 27447 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-TRGV5 CTTN chr11 70256066 + TRGV5 chr7 38398597 - Exonic hg19 ESCA TCGA-VR-A8EU 12 23 Out-of-frame Inter-chr q13.3 p14.1 Seq+ 27448 ChimerSeq STARFusion TCGA_RNA-Seq WNK1-ERC1 WNK1 chr12 922980 + ERC1 chr12 1289706 + Exonic hg19 ESCA TCGA-VR-A8EU 10 4 Out-of-frame Intra-chr p13.33 Seq+ 27449 ChimerSeq STARFusion TCGA_RNA-Seq NLRP1-C1QBP NLRP1 chr17 5485179 - C1QBP chr17 5338286 - Exonic hg19 ESCA TCGA-VR-A8EU 9 3 Out-of-frame Intra-chr p13.2 Oncogene p13.2 Seq+ 27450 ChimerSeq STARFusion TCGA_RNA-Seq KREMEN1-ZNRF3 KREMEN1 chr22 29517469 + ZNRF3 chr22 29449567 + Exonic hg19 ESCA TCGA-VR-A8EU 8 3 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 27451 ChimerSeq STARFusion TCGA_RNA-Seq GTF2H2-OCLN GTF2H2 chr5 70337349 - OCLN chr5 68840731 + Exonic hg19 ESCA TCGA-VR-A8EU 6 5 In-Frame Intra-chr q13.2 27452 ChimerSeq STARFusion TCGA_RNA-Seq ZFHX3-PMFBP1 ZFHX3 chr16 73092429 - PMFBP1 chr16 72198815 - Exonic hg19 ESCA TCGA-VR-A8EU 5 6 5'UTR-5'UTR Intra-chr q22.3 Tumor suppressor gene Transcription factor q22.2 Seq+ 27453 ChimerSeq STARFusion TCGA_RNA-Seq DACH1-KLF12 DACH1 chr13 72440054 - KLF12 chr13 74269808 - Exonic hg19 ESCA TCGA-XP-A8T8 21 22 Out-of-frame Intra-chr q21.33 Tumor suppressor gene Transcription factor q22.1 Transcription factor Seq+ 27454 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2A-CHST1 GATAD2A chr19 19576423 + CHST1 chr11 45674156 - Exonic hg19 ESCA TCGA-XP-A8T8 14 16 CDS-5'UTR Inter-chr p13.11 Transcription factor p11.2 Seq+ 27455 ChimerSeq STARFusion TCGA_RNA-Seq FCGBP-SPTAN1 FCGBP chr19 40408827 - SPTAN1 chr9 131314897 + Exonic hg19 ESCA TCGA-R6-A8WC 47 0 Out-of-frame Inter-chr q34.11 27456 ChimerSeq STARFusion TCGA_RNA-Seq FCGBP-SPTAN1 FCGBP chr19 40377204 - SPTAN1 chr9 131314897 + Exonic hg19 ESCA TCGA-R6-A8WC 16 0 Out-of-frame Inter-chr q34.11 27457 ChimerSeq STARFusion TCGA_RNA-Seq FCGBP-SPTAN1 FCGBP chr19 40392889 - SPTAN1 chr9 131314897 + Exonic hg19 ESCA TCGA-R6-A8WC 16 0 Out-of-frame Inter-chr q34.11 27458 ChimerSeq STARFusion TCGA_RNA-Seq ZNF420-DPF1 ZNF420 chr19 37582023 + DPF1 chr19 38704396 - Exonic hg19 ESCA TCGA-XP-A8T6 39 31 In-Frame Intra-chr q13.12 Transcription factor q13.2 Transcription factor Seq+ 27459 ChimerSeq STARFusion TCGA_RNA-Seq HNF4G-TERF2 HNF4G chr8 76320199 + TERF2 chr16 69406258 - Exonic hg19 ESCA TCGA-XP-A8T6 16 11 5'UTR-CDS Inter-chr q21.13 Transcription factor q22.1 Transcription factor Seq+ 27460 ChimerSeq STARFusion TCGA_RNA-Seq ZNF420-DPF1 ZNF420 chr19 37587017 + DPF1 chr19 38704396 - Exonic hg19 ESCA TCGA-XP-A8T6 4 30 Out-of-frame Intra-chr q13.12 Transcription factor q13.2 Transcription factor Seq+ 27461 ChimerSeq STARFusion TCGA_RNA-Seq HNF4G-TERF2 HNF4G chr8 76320397 + TERF2 chr16 69406258 - Exonic hg19 ESCA TCGA-XP-A8T6 2 11 5'UTR-CDS Inter-chr q21.13 Transcription factor q22.1 Transcription factor Seq+ 27462 ChimerSeq STARFusion TCGA_RNA-Seq UPF3AP1-CDC16 UPF3AP1 chr17 16649750 - CDC16 chr13 115027362 + Exonic hg19 ESCA TCGA-VR-A8EW 23 25 Out-of-frame Inter-chr p11.2 q34 27463 ChimerSeq STARFusion TCGA_RNA-Seq GTF3C3-COL5A2 GTF3C3 chr2 197643759 - COL5A2 chr2 189917694 - Exonic hg19 ESCA TCGA-VR-A8EW 19 6 Out-of-frame Intra-chr q33.1 q32.2 Seq+ 27464 ChimerSeq STARFusion TCGA_RNA-Seq UPF3AP1-CDC16 UPF3AP1 chr17 16649751 - CDC16 chr13 115028353 + Exonic hg19 ESCA TCGA-VR-A8EW 12 25 Out-of-frame Inter-chr p11.2 q34 27465 ChimerSeq STARFusion TCGA_RNA-Seq WDR44-DOCK11 WDR44 chrX 117544922 + DOCK11 chrX 117758502 + Exonic hg19 ESCA TCGA-VR-A8EW 15 3 In-Frame Intra-chr q24 q24 Seq+ 27466 ChimerSeq STARFusion TCGA_RNA-Seq DYNC1LI2-NAE1 DYNC1LI2 chr16 66783100 - NAE1 chr16 66839929 - Exonic hg19 ESCA TCGA-VR-A8Q7 508 73 In-Frame Intra-chr q22.1 q22.1 Seq+ 27467 ChimerSeq STARFusion TCGA_RNA-Seq TYK2-TMEM205 TYK2 chr19 10490291 - TMEM205 chr19 11456304 - Exonic hg19 ESCA TCGA-VR-A8Q7 107 25 5'UTR-5'UTR Intra-chr p13.2 TK:JakA p13.2 Seq+ 27468 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57725762 + VMP1 chr17 57915656 + Exonic hg19 ESCA TCGA-VR-A8Q7 104 32 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 27469 ChimerSeq STARFusion TCGA_RNA-Seq PSMA3-ACTR10 PSMA3 chr14 58734238 + ACTR10 chr14 58669573 + Exonic hg19 ESCA TCGA-VR-A8Q7 69 16 In-Frame Intra-chr q23.1 q23.1 Seq+ 27470 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1432-LARS KIAA1432 chr9 5757451 + LARS chr5 145515227 - Exonic hg19 ESCA TCGA-VR-A8Q7 58 16 In-Frame Inter-chr q32 Seq+ 27471 ChimerSeq STARFusion TCGA_RNA-Seq IRAK2-BRK1 IRAK2 chr3 10255232 + BRK1 chr3 10167310 + Exonic hg19 ESCA TCGA-VR-A8Q7 49 24 Out-of-frame Intra-chr p25.3 TKL:IRAK p25.3 Seq+ 27472 ChimerSeq STARFusion TCGA_RNA-Seq TMEM11-C17orf103 TMEM11 chr17 21117404 - C17orf103 chr17 21147537 - Exonic hg19 ESCA TCGA-VR-A8Q7 52 4 Out-of-frame Intra-chr p11.2 27473 ChimerSeq STARFusion TCGA_RNA-Seq WASH5P-TP63 WASH5P chr19 70928 - TP63 chr3 189607129 + Exonic hg19 ESCA TCGA-VR-A8Q7 47 9 3'UTR-CDS Inter-chr p13.3 q28 Tumor suppressor gene Transcription factor 27474 ChimerSeq STARFusion TCGA_RNA-Seq METTL10-CTBP2 METTL10 chr10 126453961 - CTBP2 chr10 126678267 - Exonic hg19 ESCA TCGA-VR-A8Q7 42 14 Out-of-frame Intra-chr q26.13 Seq+ 27475 ChimerSeq STARFusion TCGA_RNA-Seq SHROOM3-FAM47E SHROOM3 chr4 77680848 + FAM47E chr4 77230297 + Exonic hg19 ESCA TCGA-VR-A8Q7 41 11 CDS-3'UTR Intra-chr q21.1 q21.1 Seq+ 27476 ChimerSeq STARFusion TCGA_RNA-Seq LPGAT1-INTS7 LPGAT1 chr1 212002401 - INTS7 chr1 212126043 - Exonic hg19 ESCA TCGA-VR-A8Q7 38 12 Out-of-frame Intra-chr q32.3 q32.3 27477 ChimerSeq STARFusion TCGA_RNA-Seq TYK2-TMEM205 TYK2 chr19 10490291 - TMEM205 chr19 11453796 - Exonic hg19 ESCA TCGA-VR-A8Q7 24 25 5'UTR-CDS Intra-chr p13.2 TK:JakA p13.2 Seq+ 27478 ChimerSeq STARFusion TCGA_RNA-Seq ACSL3-KCNE4 ACSL3 chr2 223799405 + KCNE4 chr2 223916852 + Exonic hg19 ESCA TCGA-VR-A8Q7 24 2 CDS-5'UTR Intra-chr q36.1 q36.1 Seq+ 27479 ChimerSeq STARFusion TCGA_RNA-Seq C12orf43-MTMR11 C12orf43 chr12 121454235 - MTMR11 chr1 149902097 - Exonic hg19 ESCA TCGA-VR-A8Q7 22 0 Out-of-frame Inter-chr q24.31 q21.2 27480 ChimerSeq STARFusion TCGA_RNA-Seq IRAK2-BRK1 IRAK2 chr3 10255232 + BRK1 chr3 10160590 + Exonic hg19 ESCA TCGA-VR-A8Q7 16 24 Out-of-frame Intra-chr p25.3 TKL:IRAK p25.3 Seq+ 27481 ChimerSeq STARFusion TCGA_RNA-Seq SEMA3F-RNF123 SEMA3F chr3 50197167 + RNF123 chr3 49742083 + Exonic hg19 ESCA TCGA-VR-A8Q7 15 3 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 27482 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-TAOK1 RPS6KB1 chr17 57992064 + TAOK1 chr17 27822578 + Exonic hg19 ESCA TCGA-VR-A8Q7 14 1 In-Frame Intra-chr q23.1 Oncogene q11.2 27483 ChimerSeq STARFusion TCGA_RNA-Seq TLE3-YWHAH TLE3 chr15 70345566 - YWHAH chr22 32352126 + Exonic hg19 ESCA TCGA-VR-A8Q7 11 4 In-Frame Inter-chr q23 q12.3 Seq+ 27484 ChimerSeq STARFusion TCGA_RNA-Seq LONP1-FUT6 LONP1 chr19 5714194 - FUT6 chr19 5839706 - Exonic hg19 ESCA TCGA-VR-A8Q7 11 3 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 27485 ChimerSeq STARFusion TCGA_RNA-Seq LPGAT1-INTS7 LPGAT1 chr1 212002401 - INTS7 chr1 212120047 - Exonic hg19 ESCA TCGA-VR-A8Q7 4 12 Out-of-frame Intra-chr q32.3 q32.3 27486 ChimerSeq STARFusion TCGA_RNA-Seq TBCD-FOXK2 TBCD chr17 80758872 + FOXK2 chr17 80601847 + Exonic hg19 ESCA TCGA-IG-A625 11 1 CDS-3'UTR Intra-chr q25.3 Transcription factor Seq+ 27487 ChimerSeq STARFusion TCGA_RNA-Seq ANXA5-TRMT44 ANXA5 chr4 122599049 - TRMT44 chr4 8494993 + Exonic hg19 ESCA TCGA-2H-A9GM 35 7 Out-of-frame Intra-chr q27 p16.1 Seq+ 27488 ChimerSeq STARFusion TCGA_RNA-Seq MLXIP-BCL7A MLXIP chr12 122517172 + BCL7A chr12 122481792 + Exonic hg19 ESCA TCGA-VR-A8EP 25 2 Out-of-frame Intra-chr Transcription factor 27489 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-27-1835-01A 10240 5993 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 27490 ChimerSeq STARFusion TCGA_RNA-Seq SMIM13-TTLL5 SMIM13 chr6 11094622 + TTLL5 chr14 76184204 + Exonic hg19 GBM TCGA-27-1835-01A 21 11 Out-of-frame Inter-chr p24.2 q24.3 Seq+ 27491 ChimerSeq STARFusion TCGA_RNA-Seq NAA30-TERT NAA30 chr14 57866601 + TERT chr5 1282739 - Exonic hg19 GBM TCGA-27-1835-01A 7 8 Out-of-frame Inter-chr q22.3 p15.33 Oncogene Seq+ 27492 ChimerSeq STARFusion TCGA_RNA-Seq RAI1-MXRA7 RAI1 chr17 17701827 + MXRA7 chr17 74684258 - Exonic hg19 GBM TCGA-27-1835-01A 6 10 In-Frame Intra-chr p11.2 q25.1 Seq+ 27493 ChimerSeq STARFusion TCGA_RNA-Seq RHOJ-C6orf52 RHOJ chr14 63671765 + C6orf52 chr6 10671831 - Exonic hg19 GBM TCGA-27-1835-01A 2 24 In-Frame Inter-chr q23.2 p24.2 Seq+ 27494 ChimerSeq STARFusion TCGA_RNA-Seq CLPTM1L-PPP2R5E CLPTM1L chr5 1344466 - PPP2R5E chr14 63842826 - Exonic hg19 GBM TCGA-27-1835-01A 7 1 In-Frame Inter-chr p15.33 q23.2 Seq+ 27495 ChimerSeq STARFusion TCGA_RNA-Seq ATG14-FUT8 ATG14 chr14 55878320 - FUT8 chr14 66135961 + Exonic hg19 GBM TCGA-27-1835-01A 6 4 Out-of-frame Intra-chr q22.3 q23.3 Seq+ 27496 ChimerSeq STARFusion TCGA_RNA-Seq YARS-RNF19B YARS chr1 33276192 - RNF19B chr1 33415375 - Exonic hg19 GBM TCGA-27-1835-01A 6 4 In-Frame Intra-chr p35.1 p35.1 Seq+ 27497 ChimerSeq STARFusion TCGA_RNA-Seq MARCH9-OS9 2019_ 3_ 9_ chr12 58152803 + OS9 chr12 58110195 + Exonic hg19 GBM TCGA-27-1835-01A 4 9 Out-of-frame Intra-chr q14.1 q13.3 Seq+ 27498 ChimerSeq STARFusion TCGA_RNA-Seq MIIP-CMYA5 MIIP chr1 12090181 + CMYA5 chr5 79084794 + Exonic hg19 GBM TCGA-27-1835-01A 4 7 Out-of-frame Inter-chr p36.22 q14.1 Seq+ 27499 ChimerSeq STARFusion TCGA_RNA-Seq CMYA5-SRRM1 CMYA5 chr5 79084927 + SRRM1 chr1 24998673 + Exonic hg19 GBM TCGA-27-1835-01A 5 2 Out-of-frame Inter-chr q14.1 p36.11 Seq+ 27500 ChimerSeq STARFusion TCGA_RNA-Seq MARCH9-OS9 2019_ 3_ 9_ chr12 58152083 + OS9 chr12 58110195 + Exonic hg19 GBM TCGA-27-1835-01A 2 9 Out-of-frame Intra-chr q14.1 q13.3 Seq+ 27501 ChimerSeq STARFusion TCGA_RNA-Seq CLIC4-PLOD1 CLIC4 chr1 25140710 + PLOD1 chr1 12008033 + Exonic hg19 GBM TCGA-27-1835-01A 2 5 Out-of-frame Intra-chr p36.11 p36.22 Seq+ 27502 ChimerSeq STARFusion TCGA_RNA-Seq FAM155A-STAC FAM155A chr13 108518030 - STAC chr3 36484856 + Exonic hg19 GBM TCGA-27-1835-01A 2 0 In-Frame Inter-chr q33.3 p22.3 27503 ChimerSeq STARFusion TCGA_RNA-Seq METTL5-SSB METTL5 chr2 170668967 - SSB chr2 170668178 + Exonic hg19 GBM TCGA-27-1835-01A 2 0 Out-of-frame Intra-chr q31.1 q31.1 27504 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-27-1835-01A 2 0 5'UTR-CDS Intra-chr q13 q13 27505 ChimerSeq STARFusion TCGA_RNA-Seq PNPLA7-NECAB3 PNPLA7 chr9 140414369 - NECAB3 chr20 32260228 - Exonic hg19 GBM TCGA-27-1835-01A 2 0 Out-of-frame Inter-chr q34.3 q11.22 27506 ChimerSeq STARFusion TCGA_RNA-Seq KIDINS220-C3orf70 KIDINS220 chr2 8952525 - C3orf70 chr3 184801351 - Exonic hg19 GBM TCGA-06-0171-02A 21 5 Out-of-frame Inter-chr p25.1 q27.2 Seq+ 27507 ChimerSeq STARFusion TCGA_RNA-Seq CDK5RAP2-RCC1 CDK5RAP2 chr9 123342198 - RCC1 chr1 28864344 + Exonic hg19 GBM TCGA-06-0171-02A 7 1 Out-of-frame Inter-chr q33.2 p35.3 Seq+ 27508 ChimerSeq STARFusion TCGA_RNA-Seq VPS8-MBOAT2 VPS8 chr3 184658031 + MBOAT2 chr2 9048846 - Exonic hg19 GBM TCGA-06-0171-02A 3 3 In-Frame Inter-chr q27.2 p25.1 27509 ChimerSeq STARFusion TCGA_RNA-Seq STAT3-PTRF STAT3 chr17 40489453 - PTRF chr17 40557406 - Exonic hg19 GBM TCGA-06-0171-02A 3 1 Out-of-frame Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor 27510 ChimerSeq STARFusion TCGA_RNA-Seq ABL1-FNBP1 ABL1 chr9 133730483 + FNBP1 chr9 132741653 - Exonic hg19 GBM TCGA-06-0171-02A 2 2 Out-of-frame Intra-chr q34.12 TK:Abl Oncogene q34.11 27511 ChimerSeq STARFusion TCGA_RNA-Seq RASSF8-SSPN RASSF8 chr12 26208379 + SSPN chr12 26377226 + Exonic hg19 GBM TCGA-06-0171-02A 2 1 Out-of-frame Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 27512 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-SYT12 KDM2A chr11 66999431 + SYT12 chr11 66812064 + Exonic hg19 GBM TCGA-02-2486-01A 7 4 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 27513 ChimerSeq STARFusion TCGA_RNA-Seq PHF13-ESPN PHF13 chr1 6674165 + ESPN chr1 6488286 + Exonic hg19 GBM TCGA-02-2486-01A 4 2 In-Frame Intra-chr p36.31 p36.31 Seq+ 27514 ChimerSeq STARFusion TCGA_RNA-Seq TMEM234-CSMD2 TMEM234 chr1 32682860 - CSMD2 chr1 34258127 - Exonic hg19 GBM TCGA-02-2486-01A 4 1 Out-of-frame Intra-chr p35.2 p35.1 Seq+ 27515 ChimerSeq STARFusion TCGA_RNA-Seq C11orf49-CSDE1 C11orf49 chr11 47008861 + CSDE1 chr1 115292828 - Exonic hg19 GBM TCGA-02-2486-01A 2 0 CDS-5'UTR Inter-chr p11.2 p13.2 27516 ChimerSeq STARFusion TCGA_RNA-Seq C9orf96-SQSTM1 C9orf96 chr9 136253332 + SQSTM1 chr5 179263436 + Exonic hg19 GBM TCGA-02-2486-01A 2 0 Out-of-frame Inter-chr q35.3 27517 ChimerSeq STARFusion TCGA_RNA-Seq CBFA2T2-EIF2S2 CBFA2T2 chr20 32078107 + EIF2S2 chr20 32693351 - Exonic hg19 GBM TCGA-02-2486-01A 2 0 Out-of-frame Intra-chr q11.21 q11.22 Seq+ 27518 ChimerSeq STARFusion TCGA_RNA-Seq CSMD2-IL2RA CSMD2 chr1 34312485 - IL2RA chr10 6060082 - Exonic hg19 GBM TCGA-02-2486-01A 2 0 In-Frame Inter-chr p35.1 p15.1 Seq+ 27519 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-02-2486-01A 2 0 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 27520 ChimerSeq STARFusion TCGA_RNA-Seq IQCK-INTS10 IQCK chr16 19745149 + INTS10 chr8 19703215 + Exonic hg19 GBM TCGA-02-2486-01A 2 0 In-Frame Inter-chr p12.3 p21.3 27521 ChimerSeq STARFusion TCGA_RNA-Seq KBTBD2-HNRNPM KBTBD2 chr7 32931148 - HNRNPM chr19 8520289 + Exonic hg19 GBM TCGA-02-2486-01A 2 0 5'UTR-CDS Inter-chr p14.3 p13.2 27522 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1967-NPEPPS KIAA1967 chr8 22462355 + NPEPPS chr17 45695716 + Exonic hg19 GBM TCGA-02-2486-01A 2 0 5'UTR-CDS Inter-chr Tumor suppressor gene q21.32 27523 ChimerSeq STARFusion TCGA_RNA-Seq NUDCD3-CAMK2B NUDCD3 chr7 44444039 - CAMK2B chr7 44323824 - Exonic hg19 GBM TCGA-02-2486-01A 2 0 Out-of-frame Intra-chr p13 p13 27524 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-IGF2R SKIV2L2 chr5 54603975 + IGF2R chr6 160412216 + Exonic hg19 GBM TCGA-02-2486-01A 2 0 In-Frame Inter-chr q11.2 q25.3 Oncogene Tumor suppressor gene Seq+ 27525 ChimerSeq STARFusion TCGA_RNA-Seq ASH1L-C1orf61 ASH1L chr1 155385535 - C1orf61 chr1 156384545 - Exonic hg19 GBM TCGA-14-0787-01A 44 55 In-Frame Intra-chr q22 Transcription factor q22 Seq+ 27526 ChimerSeq STARFusion TCGA_RNA-Seq ASH1L-C1orf61 ASH1L chr1 155385535 - C1orf61 chr1 156374393 - Exonic hg19 GBM TCGA-14-0787-01A 7 55 Out-of-frame Intra-chr q22 Transcription factor q22 Seq+ 27527 ChimerSeq STARFusion TCGA_RNA-Seq NISCH-CYHR1 NISCH chr3 52504923 + CYHR1 chr8 145690479 - Exonic hg19 GBM TCGA-14-0787-01A 10 2 CDS-5'UTR Inter-chr p21.1 q24.3 Seq+ 27528 ChimerSeq STARFusion TCGA_RNA-Seq LPHN1-EMR3 LPHN1 chr19 14294345 - EMR3 chr19 14779664 - Exonic hg19 GBM TCGA-14-0787-01A 6 5 In-Frame Intra-chr 27529 ChimerSeq STARFusion TCGA_RNA-Seq RERE-SLC45A1 RERE chr1 8601273 - SLC45A1 chr1 8395497 + Exonic hg19 GBM TCGA-14-0787-01A 4 3 Out-of-frame Intra-chr p36.23 p36.23 Seq+ 27530 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-14-0787-01A 3 2 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 27531 ChimerSeq STARFusion TCGA_RNA-Seq CYTH3-RAB40B CYTH3 chr7 6312105 - RAB40B chr17 80618923 - Exonic hg19 GBM TCGA-14-0787-01A 3 0 Out-of-frame Inter-chr p22.1 q25.3 Seq+ 27532 ChimerSeq STARFusion TCGA_RNA-Seq ADAM17-YWHAQ ADAM17 chr2 9695638 - YWHAQ chr2 9731644 - Exonic hg19 GBM TCGA-14-0787-01A 2 0 Out-of-frame Intra-chr p25.1 p25.1 Seq+ 27533 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC3-CLDN10 DNAJC3 chr13 96416207 + CLDN10 chr13 96212386 + Exonic hg19 GBM TCGA-14-0787-01A 2 0 In-Frame Intra-chr q32.1 q32.1 Seq+ 27534 ChimerSeq STARFusion TCGA_RNA-Seq GTF3C3-NFE2L2 GTF3C3 chr2 197634639 - NFE2L2 chr2 178098999 - Exonic hg19 GBM TCGA-14-0787-01A 2 0 In-Frame Intra-chr q33.1 q31.2 Oncogene Transcription factor 27535 ChimerSeq STARFusion TCGA_RNA-Seq PTN-LOC349160 PTN chr7 136935977 - LOC349160 chr7 136717660 - Exonic hg19 GBM TCGA-14-0787-01A 2 0 CDS-3'UTR Intra-chr q33 27536 ChimerSeq STARFusion TCGA_RNA-Seq SUPT5H-EGLN2 SUPT5H chr19 39948380 + EGLN2 chr19 41313714 + Exonic hg19 GBM TCGA-14-0787-01A 2 0 In-Frame Intra-chr q13.2 q13.2 27537 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-28-2509-01A 6 11 In-Frame Intra-chr q13 Tumor suppressor gene q13 27538 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-28-2509-01A 6 0 5'UTR-CDS Intra-chr q13 q13 27539 ChimerSeq STARFusion TCGA_RNA-Seq BNC2-C9orf92 BNC2 chr9 16552528 - C9orf92 chr9 16215897 - Exonic hg19 GBM TCGA-28-2509-01A 2 0 Out-of-frame Intra-chr p22.2 Transcription factor p22.3 27540 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1 FTL chr19 49469663 + FTH1 chr11 61732363 - Exonic hg19 GBM TCGA-28-2509-01A 2 0 In-Frame Inter-chr q13.33 q12.3 27541 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-26-1442-01A 3 1 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 27542 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 GBM TCGA-26-1442-01A 3 0 CDS-5'UTR Intra-chr q23 Seq+ 27543 ChimerSeq STARFusion TCGA_RNA-Seq TMTC2-CPSF6 TMTC2 chr12 83251359 + CPSF6 chr12 69644909 + Exonic hg19 GBM TCGA-26-1442-01A 2 0 In-Frame Intra-chr q21.31 q15 27544 ChimerSeq STARFusion TCGA_RNA-Seq YAE1D1-RALA YAE1D1 chr7 39610226 + RALA chr7 39726230 + Exonic hg19 GBM TCGA-26-1442-01A 2 0 CDS-5'UTR Intra-chr p14.1 p14.1 27545 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-TJAP1 TSFM chr12 58191070 + TJAP1 chr6 43473034 + Exonic hg19 GBM TCGA-28-5207-01A 136 95 Out-of-frame Inter-chr q14.1 p21.1 Seq+ 27546 ChimerSeq STARFusion TCGA_RNA-Seq ASH1L-YY1AP1 ASH1L chr1 155531944 - YY1AP1 chr1 155642522 - Exonic hg19 GBM TCGA-28-5207-01A 7 12 5'UTR-CDS Intra-chr q22 Transcription factor q22 Seq+ 27547 ChimerSeq STARFusion TCGA_RNA-Seq ASH1L-YY1AP1 ASH1L chr1 155531944 - YY1AP1 chr1 155640255 - Exonic hg19 GBM TCGA-28-5207-01A 5 12 5'UTR-CDS Intra-chr q22 Transcription factor q22 Seq+ 27548 ChimerSeq STARFusion TCGA_RNA-Seq RPUSD3-EMC3 RPUSD3 chr3 9881868 - EMC3 chr3 10005881 - Exonic hg19 GBM TCGA-28-5207-01A 4 12 Out-of-frame Intra-chr p25.3 p25.3 27549 ChimerSeq STARFusion TCGA_RNA-Seq TXNRD2-HMOX1 TXNRD2 chr22 19929224 - HMOX1 chr22 35782678 + Exonic hg19 GBM TCGA-28-5207-01A 7 0 Out-of-frame Intra-chr q11.21 q12.3 Seq+ 27550 ChimerSeq STARFusion TCGA_RNA-Seq RPUSD3-EMC3 RPUSD3 chr3 9883667 - EMC3 chr3 10005881 - Exonic hg19 GBM TCGA-28-5207-01A 2 12 Out-of-frame Intra-chr p25.3 p25.3 27551 ChimerSeq STARFusion TCGA_RNA-Seq ASH1L-GON4L ASH1L chr1 155531944 - GON4L chr1 155744964 - Exonic hg19 GBM TCGA-28-5207-01A 4 3 5'UTR-CDS Intra-chr q22 Transcription factor q22 Seq+ 27552 ChimerSeq STARFusion TCGA_RNA-Seq MTMR6-CDX2 MTMR6 chr13 25841917 - CDX2 chr13 28537506 - Exonic hg19 GBM TCGA-28-5207-01A 4 2 Out-of-frame Intra-chr q12.13 q12.2 Tumor suppressor gene Transcription factor Seq+ 27553 ChimerSeq STARFusion TCGA_RNA-Seq LOC100507266-MSX1 LOC100507266 chr4 4651269 + MSX1 chr4 4864428 + Exonic hg19 GBM TCGA-28-5207-01A 3 0 5'UTR-CDS Intra-chr p16.2 Transcription factor 27554 ChimerSeq STARFusion TCGA_RNA-Seq VPS37B-PITPNM2 VPS37B chr12 123380499 - PITPNM2 chr12 123519232 - Exonic hg19 GBM TCGA-28-5207-01A 3 0 CDS-5'UTR Intra-chr q24.31 q24.31 27555 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-28-5207-01A 2 1 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 27556 ChimerSeq STARFusion TCGA_RNA-Seq CBFA2T2-PLA2G6 CBFA2T2 chr20 32078107 + PLA2G6 chr22 38565478 - Exonic hg19 GBM TCGA-28-5207-01A 2 0 CDS-5'UTR Inter-chr q11.21 q13.1 27557 ChimerSeq STARFusion TCGA_RNA-Seq COL4A2-ODF2L COL4A2 chr13 111138183 + ODF2L chr1 86814561 - Exonic hg19 GBM TCGA-28-5207-01A 2 0 In-Frame Inter-chr q34 p22.3 27558 ChimerSeq STARFusion TCGA_RNA-Seq MORC3-TMEM80 MORC3 chr21 37717005 + TMEM80 chr11 700142 + Exonic hg19 GBM TCGA-28-5207-01A 2 0 In-Frame Inter-chr q22.12 p15.5 27559 ChimerSeq STARFusion TCGA_RNA-Seq STX8-TRIM16L STX8 chr17 9395146 - TRIM16L chr17 18638190 + Exonic hg19 GBM TCGA-06-0221-02A 7 5 In-Frame Intra-chr p13.1 p11.2 Seq+ 27560 ChimerSeq STARFusion TCGA_RNA-Seq OPCML-NTM OPCML chr11 133402159 - NTM chr11 131781458 + Exonic hg19 GBM TCGA-06-0221-02A 7 0 In-Frame Intra-chr q25 Tumor suppressor gene q25 Seq+ 27561 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 GBM TCGA-06-0221-02A 4 2 CDS-5'UTR Intra-chr q23 Seq+ 27562 ChimerSeq STARFusion TCGA_RNA-Seq SH3PXD2A-LOC100505540 SH3PXD2A chr10 105495490 - LOC100505540 chr10 98863077 + Exonic hg19 GBM TCGA-06-0221-02A 3 3 CDS-5'UTR Intra-chr q24.33 27563 ChimerSeq STARFusion TCGA_RNA-Seq MAP2K4-HCG18 MAP2K4 chr17 11999011 + HCG18 chr6 30264014 - Exonic hg19 GBM TCGA-06-0221-02A 3 1 CDS-3'UTR Inter-chr p12 STE:STE7 Oncogene Tumor suppressor gene Seq+ 27564 ChimerSeq STARFusion TCGA_RNA-Seq OPRD1-EPB41 OPRD1 chr1 29185815 + EPB41 chr1 29313960 + Exonic hg19 GBM TCGA-06-0221-02A 3 0 CDS-5'UTR Intra-chr p35.3 p35.3 Tumor suppressor gene 27565 ChimerSeq STARFusion TCGA_RNA-Seq FAM155B-EDA FAM155B chrX 68725986 + EDA chrX 69176877 + Exonic hg19 GBM TCGA-06-0221-02A 2 0 In-Frame Intra-chr q13.1 q13.1 27566 ChimerSeq STARFusion TCGA_RNA-Seq LUC7L-CPM LUC7L chr16 270648 - CPM chr12 69265736 - Exonic hg19 GBM TCGA-32-1980-01A 3 2 In-Frame Inter-chr p13.3 q15 Seq+ 27567 ChimerSeq STARFusion TCGA_RNA-Seq WDR85-ZMYND19 WDR85 chr9 140458886 - ZMYND19 chr9 140483170 - Exonic hg19 GBM TCGA-32-1980-01A 3 2 Out-of-frame Intra-chr q34.3 Seq+ 27568 ChimerSeq STARFusion TCGA_RNA-Seq PACSIN2-TTLL1 PACSIN2 chr22 43411027 - TTLL1 chr22 43475992 - Exonic hg19 GBM TCGA-32-1980-01A 3 0 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 27569 ChimerSeq STARFusion TCGA_RNA-Seq MFN2-FAM213B MFN2 chr1 12042171 + FAM213B chr1 2519180 + Exonic hg19 GBM TCGA-32-1980-01A 2 3 5'UTR-5'UTR Intra-chr p36.22 27570 ChimerSeq STARFusion TCGA_RNA-Seq ENPP2-FAM192A ENPP2 chr8 120592356 - FAM192A chr16 57188419 - Exonic hg19 GBM TCGA-32-1980-01A 2 0 In-Frame Inter-chr q24.12 q13 27571 ChimerSeq STARFusion TCGA_RNA-Seq SP4-GPNMB SP4 chr7 21469210 + GPNMB chr7 23313140 + Exonic hg19 GBM TCGA-28-1747-01C 153 105 In-Frame Intra-chr p15.3 Transcription factor p15.3 Seq+ 27572 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55268106 + SEPT14 chr7 55863785 - Exonic hg19 GBM TCGA-28-1747-01C 94 35 In-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 27573 ChimerSeq STARFusion TCGA_RNA-Seq PTEN-MINPP1 PTEN chr10 89653866 + MINPP1 chr10 89280793 + Exonic hg19 GBM TCGA-28-1747-01C 2 1 Out-of-frame Intra-chr q23.31 Oncogene Tumor suppressor gene q23.2 27574 ChimerSeq STARFusion TCGA_RNA-Seq VPS37B-SIRT4 VPS37B chr12 123380499 - SIRT4 chr12 120741364 + Exonic hg19 GBM TCGA-28-1747-01C 2 1 CDS-5'UTR Intra-chr q24.31 q24.31 Tumor suppressor gene Seq+ 27575 ChimerSeq STARFusion TCGA_RNA-Seq BTRC-TNNC2 BTRC chr10 103113985 + TNNC2 chr20 44453473 - Exonic hg19 GBM TCGA-28-1747-01C 2 0 In-Frame Inter-chr q24.32 q13.12 27576 ChimerSeq STARFusion TCGA_RNA-Seq PSPH-SCOC PSPH chr7 56099622 - SCOC chr4 141300275 + Exonic hg19 GBM TCGA-28-1747-01C 2 0 5'UTR-CDS Inter-chr p11.2 q31.1 27577 ChimerSeq STARFusion TCGA_RNA-Seq TMEM164-RGAG1 TMEM164 chrX 109414748 + RGAG1 chrX 109688381 + Exonic hg19 GBM TCGA-28-1747-01C 2 0 CDS-5'UTR Intra-chr q23 27578 ChimerSeq STARFusion TCGA_RNA-Seq SDC4-SPCS1 SDC4 chr20 43976965 - SPCS1 chr3 52740660 + Exonic hg19 GBM TCGA-12-5295-01A 183 103 In-Frame Inter-chr q13.12 p21.1 Seq+ 27579 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-12-5295-01A 2 0 5'UTR-CDS Intra-chr q13 q13 27580 ChimerSeq STARFusion TCGA_RNA-Seq RASSF8-SSPN RASSF8 chr12 26208379 + SSPN chr12 26377226 + Exonic hg19 GBM TCGA-12-5295-01A 2 0 Out-of-frame Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 27581 ChimerSeq STARFusion TCGA_RNA-Seq RBM23-PSMB5 RBM23 chr14 23375404 - PSMB5 chr14 23502883 - Exonic hg19 GBM TCGA-12-5295-01A 2 0 Out-of-frame Intra-chr q11.2 q11.2 27582 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642595 + MT3 chr16 56623782 + Exonic hg19 GBM TCGA-26-5133-01A 2 22 In-Frame Intra-chr q13 Tumor suppressor gene q13 27583 ChimerSeq STARFusion TCGA_RNA-Seq SF3B3-DDX19B SF3B3 chr16 70595687 + DDX19B chr16 70358488 + Exonic hg19 GBM TCGA-26-5133-01A 6 4 In-Frame Intra-chr q22.1 q22.1 Seq+ 27584 ChimerSeq STARFusion TCGA_RNA-Seq DENND3-PTK2 DENND3 chr8 142154358 + PTK2 chr8 141669777 - Exonic hg19 GBM TCGA-26-5133-01A 4 2 In-Frame Intra-chr q24.3 q24.3 Seq+ 27585 ChimerSeq STARFusion TCGA_RNA-Seq TAB1-PICK1 TAB1 chr22 39817976 + PICK1 chr22 38467689 + Exonic hg19 GBM TCGA-26-5133-01A 4 2 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 27586 ChimerSeq STARFusion TCGA_RNA-Seq PTDSS2-WASH3P PTDSS2 chr11 450637 + WASH3P chr15 102506273 + Exonic hg19 GBM TCGA-26-5133-01A 3 1 CDS-5'UTR Inter-chr q26.3 27587 ChimerSeq STARFusion TCGA_RNA-Seq QKI-PACRG QKI chr6 163899928 + PACRG chr6 163483182 + Exonic hg19 GBM TCGA-26-5133-01A 2 3 In-Frame Intra-chr q26 q26 Tumor suppressor gene Seq+ 27588 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-26-5133-01A 2 2 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 27589 ChimerSeq STARFusion TCGA_RNA-Seq ILF3-BRAT1 ILF3 chr19 10765163 + BRAT1 chr7 2587112 - Exonic hg19 GBM TCGA-26-5133-01A 2 0 5'UTR-CDS Inter-chr p13.2 p22.3 27590 ChimerSeq STARFusion TCGA_RNA-Seq NRP1-RUFY2 NRP1 chr10 33619636 - RUFY2 chr10 70123870 - Exonic hg19 GBM TCGA-26-5133-01A 2 0 In-Frame Intra-chr p11.22 q21.3 27591 ChimerSeq STARFusion TCGA_RNA-Seq UST-GINM1 UST chr6 149285699 + GINM1 chr6 149893421 + Exonic hg19 GBM TCGA-26-5133-01A 2 0 Out-of-frame Intra-chr q25.1 q25.1 27592 ChimerSeq STARFusion TCGA_RNA-Seq ZNF736-CHMP1A ZNF736 chr7 63797360 + CHMP1A chr16 89713739 - Exonic hg19 GBM TCGA-26-5133-01A 2 0 In-Frame Inter-chr q11.21 Transcription factor q24.3 27593 ChimerSeq STARFusion TCGA_RNA-Seq C8orf33-FLJ43681 C8orf33 chr8 146278829 + FLJ43681 chr17 81187693 + Exonic hg19 GBM TCGA-27-2521-01A 24 4 CDS-5'UTR Inter-chr q24.3 27594 ChimerSeq STARFusion TCGA_RNA-Seq CD83-FAM138E CD83 chr6 14136208 + FAM138E chr15 102496113 + Exonic hg19 GBM TCGA-27-2521-01A 8 3 Out-of-frame Inter-chr p23 q26.3 Seq+ 27595 ChimerSeq STARFusion TCGA_RNA-Seq FOCAD-MOB3B FOCAD chr9 20867011 + MOB3B chr9 27359234 - Exonic hg19 GBM TCGA-27-2521-01A 5 6 Out-of-frame Intra-chr p21.3 p21.2 Seq+ 27596 ChimerSeq STARFusion TCGA_RNA-Seq SCD5-HNRPDL SCD5 chr4 83719459 - HNRPDL chr4 83349599 - Exonic hg19 GBM TCGA-27-2521-01A 5 2 Out-of-frame Intra-chr q21.22 Seq+ 27597 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-27-2521-01A 4 1 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 27598 ChimerSeq STARFusion TCGA_RNA-Seq PIAS2-ST8SIA5 PIAS2 chr18 44407922 - ST8SIA5 chr18 44284627 - Exonic hg19 GBM TCGA-27-2521-01A 4 1 In-Frame Intra-chr q21.1 q21.1 Seq+ 27599 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-27-2521-01A 3 0 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 27600 ChimerSeq STARFusion TCGA_RNA-Seq XPO1-USP34 XPO1 chr2 61749746 - USP34 chr2 61528589 - Exonic hg19 GBM TCGA-27-2521-01A 2 2 In-Frame Intra-chr p15 Oncogene p15 Seq+ 27601 ChimerSeq STARFusion TCGA_RNA-Seq FRG1-LOC283788 FRG1 chr4 190883087 + LOC283788 chrUn_gl000219 58989 - Exonic hg19 GBM TCGA-27-2521-01A 2 0 CDS-3'UTR Inter-chr 27602 ChimerSeq STARFusion TCGA_RNA-Seq LRRN3-IMMP2L LRRN3 chr7 110731560 + IMMP2L chr7 111201979 - Exonic hg19 GBM TCGA-27-2521-01A 2 0 5'UTR-5'UTR Intra-chr q31.1 q31.1 27603 ChimerSeq STARFusion TCGA_RNA-Seq PAPD7-STIM2 PAPD7 chr5 6746540 + STIM2 chr4 27019333 + Exonic hg19 GBM TCGA-27-2521-01A 2 0 In-Frame Inter-chr p15.31 p15.2 27604 ChimerSeq STARFusion TCGA_RNA-Seq PILRB-GATS PILRB chr7 99936512 + GATS chr7 99810756 - Exonic hg19 GBM TCGA-27-2521-01A 2 0 5'UTR-3'UTR Intra-chr q22.1 q22.1 27605 ChimerSeq STARFusion TCGA_RNA-Seq SPG7-GNAS SPG7 chr16 89579445 + GNAS chr20 57470667 + Exonic hg19 GBM TCGA-27-2521-01A 2 0 In-Frame Inter-chr q24.3 q13.32 Oncogene 27606 ChimerSeq STARFusion TCGA_RNA-Seq HMGA2-NUP107 HMGA2 chr12 66232349 + NUP107 chr12 69109407 + Exonic hg19 GBM TCGA-06-0187-01A 8 4 In-Frame Intra-chr q14.3 Transcription factor q15 Seq+ 27607 ChimerSeq STARFusion TCGA_RNA-Seq CNOT2-TSPAN8 CNOT2 chr12 70637260 + TSPAN8 chr12 71551567 - Exonic hg19 GBM TCGA-06-0187-01A 5 0 5'UTR-5'UTR Intra-chr q15 q21.1 Seq+ 27608 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-06-0187-01A 2 3 In-Frame Intra-chr q13 Tumor suppressor gene q13 27609 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55268106 + SEPT14 chr7 55863785 - Exonic hg19 GBM TCGA-06-0187-01A 2 1 In-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 27610 ChimerSeq STARFusion TCGA_RNA-Seq RBM47-LIMCH1 RBM47 chr4 40631413 - LIMCH1 chr4 41640949 + Exonic hg19 GBM TCGA-06-0187-01A 2 1 5'UTR-CDS Intra-chr p14 p13 27611 ChimerSeq STARFusion TCGA_RNA-Seq ORC2-CASP10 ORC2 chr2 201828213 - CASP10 chr2 202073793 + Exonic hg19 GBM TCGA-06-0187-01A 2 0 5'UTR-CDS Intra-chr q33.1 q33.1 27612 ChimerSeq STARFusion TCGA_RNA-Seq SLC38A1-GLIPR1L1 SLC38A1 chr12 46622936 - GLIPR1L1 chr12 75756882 + Exonic hg19 GBM TCGA-06-0187-01A 2 0 In-Frame Intra-chr q13.11 q21.2 27613 ChimerSeq STARFusion TCGA_RNA-Seq ZNF398-SIRT2 ZNF398 chr7 148826036 + SIRT2 chr19 39374396 - Exonic hg19 GBM TCGA-06-0187-01A 2 0 5'UTR-CDS Inter-chr q36.1 Transcription factor Tumor suppressor gene 27614 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHM2-TMEM51 PLEKHM2 chr1 16046415 + TMEM51 chr1 15536986 + Exonic hg19 GBM TCGA-12-3650-01A 9 16 CDS-5'UTR Intra-chr p36.21 p36.21 Seq+ 27615 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHM2-TMEM51 PLEKHM2 chr1 16046415 + TMEM51 chr1 15541391 + Exonic hg19 GBM TCGA-12-3650-01A 8 16 CDS-5'UTR Intra-chr p36.21 p36.21 Seq+ 27616 ChimerSeq STARFusion TCGA_RNA-Seq JDP2-LOC100128420 JDP2 chr14 75894955 + LOC100128420 chrX 135724262 + Exonic hg19 GBM TCGA-12-3650-01A 9 1 5'UTR-5'UTR Inter-chr q24.3 Tumor suppressor gene Transcription factor 27617 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHM2-TMEM51 PLEKHM2 chr1 16043311 + TMEM51 chr1 15536986 + Exonic hg19 GBM TCGA-12-3650-01A 5 16 CDS-5'UTR Intra-chr p36.21 p36.21 Seq+ 27618 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHM2-TMEM51 PLEKHM2 chr1 16045120 + TMEM51 chr1 15541391 + Exonic hg19 GBM TCGA-12-3650-01A 3 16 CDS-5'UTR Intra-chr p36.21 p36.21 Seq+ 27619 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHM2-TMEM51 PLEKHM2 chr1 16046415 + TMEM51 chr1 15545822 + Exonic hg19 GBM TCGA-12-3650-01A 2 16 Out-of-frame Intra-chr p36.21 p36.21 Seq+ 27620 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-12-3650-01A 4 0 5'UTR-CDS Intra-chr q13 q13 27621 ChimerSeq STARFusion TCGA_RNA-Seq TMSB15A-H2BFXP TMSB15A chrX 101769992 - H2BFXP chrX 103316442 - Exonic hg19 GBM TCGA-12-3650-01A 3 0 CDS-3'UTR Intra-chr q22.1 27622 ChimerSeq STARFusion TCGA_RNA-Seq PON2-SUSD4 PON2 chr7 95045554 - SUSD4 chr1 223396973 - Exonic hg19 GBM TCGA-12-3650-01A 2 0 Out-of-frame Inter-chr q21.3 q41 27623 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D14-HTRA3 TBC1D14 chr4 6996029 + HTRA3 chr4 8288288 + Exonic hg19 GBM TCGA-28-5204-01A 80 57 In-Frame Intra-chr p16.1 p16.1 Tumor suppressor gene Seq+ 27624 ChimerSeq STARFusion TCGA_RNA-Seq CLTA-UBE2R2 CLTA chr9 36204176 + UBE2R2 chr9 33911962 + Exonic hg19 GBM TCGA-28-5204-01A 72 43 In-Frame Intra-chr p13.3 p13.3 Seq+ 27625 ChimerSeq STARFusion TCGA_RNA-Seq LOC100129917-CPLX1 LOC100129917 chr4 775560 - CPLX1 chr4 780486 - Exonic hg19 GBM TCGA-28-5204-01A 13 2 3'UTR-CDS Intra-chr p16.3 27626 ChimerSeq STARFusion TCGA_RNA-Seq FAM102A-PTGES2 FAM102A chr9 130742271 - PTGES2 chr9 130887720 - Exonic hg19 GBM TCGA-28-5204-01A 10 2 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 27627 ChimerSeq STARFusion TCGA_RNA-Seq TRPM3-KHDRBS2 TRPM3 chr9 73296422 - KHDRBS2 chr6 62407158 - Exonic hg19 GBM TCGA-28-5204-01A 9 0 Out-of-frame Inter-chr q21.13 q11.1 Seq+ 27628 ChimerSeq STARFusion TCGA_RNA-Seq FAM149B1-ADK FAM149B1 chr10 74970196 + ADK chr10 76349040 + Exonic hg19 GBM TCGA-28-5204-01A 2 4 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 27629 ChimerSeq STARFusion TCGA_RNA-Seq TCHH-GFAP TCHH chr1 152084650 - GFAP chr17 42988823 - Exonic hg19 GBM TCGA-28-5204-01A 3 0 Out-of-frame Inter-chr q21.3 q21.31 27630 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-28-5204-01A 2 2 In-Frame Intra-chr q13 Tumor suppressor gene q13 27631 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 GBM TCGA-28-5204-01A 2 0 CDS-5'UTR Intra-chr q23 Seq+ 27632 ChimerSeq STARFusion TCGA_RNA-Seq SLC22A4-PDLIM4 SLC22A4 chr5 131630702 + PDLIM4 chr5 131598302 + Exonic hg19 GBM TCGA-06-2567-01A 5 0 In-Frame Intra-chr q31.1 q31.1 Tumor suppressor gene Seq+ 27633 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-06-2567-01A 4 3 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 27634 ChimerSeq STARFusion TCGA_RNA-Seq FSD1-C17orf99 FSD1 chr19 4312048 + C17orf99 chr17 76157036 + Exonic hg19 GBM TCGA-06-2567-01A 2 0 In-Frame Inter-chr p13.3 q25.3 27635 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55268106 + SEPT14 chr7 55863785 - Exonic hg19 GBM TCGA-27-1837-01A 148 98 In-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 27636 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-27-1837-01A 6 1 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 27637 ChimerSeq STARFusion TCGA_RNA-Seq WDR20-ASNA1 WDR20 chr14 102606509 + ASNA1 chr19 12856191 + Exonic hg19 GBM TCGA-14-0736-02A 101 106 In-Frame Inter-chr q32.31 p13.13 Seq+ 27638 ChimerSeq STARFusion TCGA_RNA-Seq GRB10-EEPD1 GRB10 chr7 50737419 - EEPD1 chr7 36278594 + Exonic hg19 GBM TCGA-14-0736-02A 7 2 Out-of-frame Intra-chr p12.1 p14.2 Seq+ 27639 ChimerSeq STARFusion TCGA_RNA-Seq KLHL7-TMEM106B KLHL7 chr7 23191828 + TMEM106B chr7 12254435 + Exonic hg19 GBM TCGA-14-0736-02A 5 6 5'UTR-5'UTR Intra-chr p15.3 p21.3 Seq+ 27640 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-14-0736-02A 3 0 5'UTR-CDS Intra-chr q13 q13 27641 ChimerSeq STARFusion TCGA_RNA-Seq C5orf63-MARCH3 C5orf63 chr5 126394574 - 2019_ 3_ 3_ chr5 126253919 - Exonic hg19 GBM TCGA-14-0736-02A 2 0 Out-of-frame Intra-chr q23.2 q23.2 27642 ChimerSeq STARFusion TCGA_RNA-Seq CYLD-HAGH CYLD chr16 50788335 + HAGH chr16 1859834 - Exonic hg19 GBM TCGA-14-0736-02A 2 0 Out-of-frame Intra-chr q12.1 Oncogene Tumor suppressor gene p13.3 27643 ChimerSeq STARFusion TCGA_RNA-Seq LANCL1-MYL1 LANCL1 chr2 211341040 - MYL1 chr2 211167239 - Exonic hg19 GBM TCGA-14-0736-02A 2 0 In-Frame Intra-chr q34 q34 27644 ChimerSeq STARFusion TCGA_RNA-Seq ME2-NARS ME2 chr18 48443878 + NARS chr18 55283207 - Exonic hg19 GBM TCGA-14-0736-02A 2 0 In-Frame Intra-chr q21.2 q21.31 27645 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R2-SPAG16 PPP6R2 chr22 50832564 + SPAG16 chr2 214174783 + Exonic hg19 GBM TCGA-14-0736-02A 2 0 Out-of-frame Inter-chr q13.33 q34 27646 ChimerSeq STARFusion TCGA_RNA-Seq ST6GALNAC3-SLC14A1 ST6GALNAC3 chr1 76540569 + SLC14A1 chr18 43314239 + Exonic hg19 GBM TCGA-14-0736-02A 2 0 Out-of-frame Inter-chr p31.1 q12.3 27647 ChimerSeq STARFusion TCGA_RNA-Seq ZEB2-ARHGAP15 ZEB2 chr2 145274845 - ARHGAP15 chr2 144460988 + Exonic hg19 GBM TCGA-14-0736-02A 2 0 In-Frame Intra-chr q22.3 Transcription factor q22.2 27648 ChimerSeq STARFusion TCGA_RNA-Seq AKAP11-MRPS31 AKAP11 chr13 42882745 + MRPS31 chr13 41303737 - Exonic hg19 GBM TCGA-06-2558-01A 32 23 Out-of-frame Intra-chr q14.11 q14.11 Seq+ 27649 ChimerSeq STARFusion TCGA_RNA-Seq SLC26A10-METTL21B SLC26A10 chr12 58014235 + METTL21B chr12 58174038 + Exonic hg19 GBM TCGA-06-2558-01A 12 3 In-Frame Intra-chr q13.3 Seq+ 27650 ChimerSeq STARFusion TCGA_RNA-Seq NOC2L-LOC401010 NOC2L chr1 880476 - LOC401010 chr2 132200347 - Exonic hg19 GBM TCGA-06-2558-01A 8 0 Out-of-frame Inter-chr p36.33 27651 ChimerSeq STARFusion TCGA_RNA-Seq POLR2A-ASAP2 POLR2A chr17 7388176 + ASAP2 chr2 9419446 + Exonic hg19 GBM TCGA-06-2558-01A 7 1 In-Frame Inter-chr p13.1 p25.1 Seq+ 27652 ChimerSeq STARFusion TCGA_RNA-Seq ULK4-KCNN4 ULK4 chr3 41996114 - KCNN4 chr19 44280788 - Exonic hg19 GBM TCGA-06-2558-01A 4 1 In-Frame Inter-chr p22.1 Other:ULK q13.31 27653 ChimerSeq STARFusion TCGA_RNA-Seq LOC100506844-DCTN2 LOC100506844 chr12 58329253 - DCTN2 chr12 57929628 - Exonic hg19 GBM TCGA-06-2558-01A 3 2 3'UTR-CDS Intra-chr q13.3 27654 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-06-2558-01A 3 1 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 27655 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB4-ACADVL ZBTB4 chr17 7382775 - ACADVL chr17 7123923 + Exonic hg19 GBM TCGA-06-2558-01A 3 1 5'UTR-CDS Intra-chr Tumor suppressor gene Transcription factor p13.1 Seq+ 27656 ChimerSeq STARFusion TCGA_RNA-Seq BCLAF1-COL21A1 BCLAF1 chr6 136610851 - COL21A1 chr6 56047454 - Exonic hg19 GBM TCGA-06-2558-01A 2 2 5'UTR-5'UTR Intra-chr q23.3 p12.1 27657 ChimerSeq STARFusion TCGA_RNA-Seq TCEA1-FAM150A TCEA1 chr8 54922990 - FAM150A chr8 53455005 - Exonic hg19 GBM TCGA-06-2558-01A 2 1 Out-of-frame Intra-chr q11.23 27658 ChimerSeq STARFusion TCGA_RNA-Seq C12orf60-PDE6H C12orf60 chr12 14956685 + PDE6H chr12 15130906 + Exonic hg19 GBM TCGA-06-2558-01A 2 0 5'UTR-5'UTR Intra-chr p12.3 p12.3 27659 ChimerSeq STARFusion TCGA_RNA-Seq FAM135A-BAI3 FAM135A chr6 71212494 + BAI3 chr6 70082298 + Exonic hg19 GBM TCGA-06-2558-01A 2 0 In-Frame Intra-chr q13 27660 ChimerSeq STARFusion TCGA_RNA-Seq NCOA7-FBXL4 NCOA7 chr6 126176386 + FBXL4 chr6 99328500 - Exonic hg19 GBM TCGA-06-2558-01A 2 0 Out-of-frame Intra-chr q22.31 q16.2 27661 ChimerSeq STARFusion TCGA_RNA-Seq RAF1-SLC25A27 RAF1 chr3 12629090 - SLC25A27 chr6 46644384 + Exonic hg19 GBM TCGA-06-2558-01A 2 0 Out-of-frame Inter-chr p25.2 TKL:RAF Oncogene p12.3 27662 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-XRCC6BP1 TSFM chr12 58186856 + XRCC6BP1 chr12 58339411 + Exonic hg19 GBM TCGA-06-2558-01A 2 0 In-Frame Intra-chr q14.1 27663 ChimerSeq STARFusion TCGA_RNA-Seq LOC100507266-MSX1 LOC100507266 chr4 4651269 + MSX1 chr4 4864428 + Exonic hg19 GBM TCGA-15-0742-01A 2 0 5'UTR-CDS Intra-chr p16.2 Transcription factor 27664 ChimerSeq STARFusion TCGA_RNA-Seq CDK12-CDC6 CDK12 chr17 37619370 + CDC6 chr17 38445660 + Exonic hg19 GBM TCGA-06-0130-01A 10 5 CDS-3'UTR Intra-chr q12 Oncogene q21.2 Seq+ 27665 ChimerSeq STARFusion TCGA_RNA-Seq TET1-CCAR1 TET1 chr10 70446464 + CCAR1 chr10 70549467 + Exonic hg19 GBM TCGA-06-0130-01A 7 6 In-Frame Intra-chr q21.3 Oncogene Transcription factor q21.3 Tumor suppressor gene 27666 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-OS9 TSFM chr12 58190168 + OS9 chr12 58109543 + Exonic hg19 GBM TCGA-06-0130-01A 5 2 Out-of-frame Intra-chr q14.1 q13.3 Seq+ 27667 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-OS9 TSFM chr12 58186856 + OS9 chr12 58109543 + Exonic hg19 GBM TCGA-06-0130-01A 5 2 Out-of-frame Intra-chr q14.1 q13.3 Seq+ 27668 ChimerSeq STARFusion TCGA_RNA-Seq PION-STYXL1 PION chr7 77006165 - STYXL1 chr7 75634722 - Exonic hg19 GBM TCGA-06-0130-01A 4 4 In-Frame Intra-chr q11.23 Seq+ 27669 ChimerSeq STARFusion TCGA_RNA-Seq DES-VIM DES chr2 220286282 + VIM chr10 17277845 + Exonic hg19 GBM TCGA-06-0130-01A 2 0 In-Frame Inter-chr q35 p13 Tumor suppressor gene 27670 ChimerSeq STARFusion TCGA_RNA-Seq LOC100507266-C20orf111 LOC100507266 chr4 4546634 + C20orf111 chr20 42835638 - Exonic hg19 GBM TCGA-06-0130-01A 2 0 5'UTR-5'UTR Inter-chr 27671 ChimerSeq STARFusion TCGA_RNA-Seq MICAL2-RHBDD1 MICAL2 chr11 12257792 + RHBDD1 chr2 227860147 + Exonic hg19 GBM TCGA-06-0130-01A 2 0 Out-of-frame Inter-chr p15.3 q36.3 27672 ChimerSeq STARFusion TCGA_RNA-Seq SRCAP-RPS4Y1 SRCAP chr16 30727800 + RPS4Y1 chrY 2722641 + Exonic hg19 GBM TCGA-06-0132-01A 37 18 CDS-5'UTR Inter-chr p11.2 Transcription factor p11.2 Seq+ 27673 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-06-0132-01A 4 2 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 27674 ChimerSeq STARFusion TCGA_RNA-Seq RPS4Y1-CDH13 RPS4Y1 chrY 2712298 + CDH13 chr16 83158990 + Exonic hg19 GBM TCGA-06-0132-01A 3 4 5'UTR-5'UTR Inter-chr p11.2 q23.3 Tumor suppressor gene Seq+ 27675 ChimerSeq STARFusion TCGA_RNA-Seq LPAR1-TMOD1 LPAR1 chr9 113703701 - TMOD1 chr9 100353573 + Exonic hg19 GBM TCGA-06-0132-01A 2 0 Out-of-frame Intra-chr q31.3 q22.33 27676 ChimerSeq STARFusion TCGA_RNA-Seq LOC100996291-PLA2G6 LOC100996291 chr17 76267333 - PLA2G6 chr22 38509661 - Exonic hg19 GBM TCGA-19-4065-01A 2 0 Out-of-frame Inter-chr q13.1 27677 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L2-NUS1 NFE2L2 chr2 178128131 - NUS1 chr6 118014205 + Exonic hg19 GBM TCGA-19-4065-01A 2 0 5'UTR-CDS Inter-chr q31.2 Oncogene Transcription factor q22.1 27678 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1211-NMU KIAA1211 chr4 57045596 + NMU chr4 56496627 - Exonic hg19 GBM TCGA-06-2559-01A 58 24 5'UTR-CDS Intra-chr q12 q12 Seq+ 27679 ChimerSeq STARFusion TCGA_RNA-Seq HOPX-PDCL2 HOPX chr4 57547421 - PDCL2 chr4 56448404 - Exonic hg19 GBM TCGA-06-2559-01A 48 58 5'UTR-CDS Intra-chr q12 Tumor suppressor gene q12 Seq+ 27680 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-DCUN1D4 CTDSP2 chr12 58240155 - DCUN1D4 chr4 52765436 + Exonic hg19 GBM TCGA-06-2559-01A 36 19 Out-of-frame Inter-chr q14.1 q12 Seq+ 27681 ChimerSeq STARFusion TCGA_RNA-Seq HOPX-PDCL2 HOPX chr4 57547819 - PDCL2 chr4 56448404 - Exonic hg19 GBM TCGA-06-2559-01A 14 58 5'UTR-CDS Intra-chr q12 Tumor suppressor gene q12 Seq+ 27682 ChimerSeq STARFusion TCGA_RNA-Seq TMEM165-PDGFRA TMEM165 chr4 56262563 + PDGFRA chr4 55133456 + Exonic hg19 GBM TCGA-06-2559-01A 19 24 In-Frame Intra-chr q12 q12 Oncogene Seq+ 27683 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-LOC100422737 CTDSP2 chr12 58240155 - LOC100422737 chr6 107172535 - Exonic hg19 GBM TCGA-06-2559-01A 20 6 CDS-3'UTR Inter-chr q14.1 27684 ChimerSeq STARFusion TCGA_RNA-Seq AASDH-LRRC66 AASDH chr4 57217508 - LRRC66 chr4 52869558 - Exonic hg19 GBM TCGA-06-2559-01A 14 10 Out-of-frame Intra-chr q12 q12 Seq+ 27685 ChimerSeq STARFusion TCGA_RNA-Seq AASDH-LRRC66 AASDH chr4 57217508 - LRRC66 chr4 52864103 - Exonic hg19 GBM TCGA-06-2559-01A 5 10 In-Frame Intra-chr q12 q12 Seq+ 27686 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-06-2559-01A 4 1 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 27687 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-METTL21B TSFM chr12 58177066 + METTL21B chr12 58166800 + Exonic hg19 GBM TCGA-06-2559-01A 4 1 In-Frame Intra-chr q14.1 Seq+ 27688 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-06-2559-01A 2 2 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 27689 ChimerSeq STARFusion TCGA_RNA-Seq PDGFRA-XRCC6BP1 PDGFRA chr4 55095582 + XRCC6BP1 chr12 58339411 + Exonic hg19 GBM TCGA-06-2559-01A 2 2 5'UTR-CDS Inter-chr q12 Oncogene 27690 ChimerSeq STARFusion TCGA_RNA-Seq LOC400940-WHSC1 LOC400940 chr2 6122989 + WHSC1 chr4 1902353 + Exonic hg19 GBM TCGA-06-2559-01A 2 0 5'UTR-5'UTR Inter-chr Oncogene 27691 ChimerSeq STARFusion TCGA_RNA-Seq MCAM-CAMK1 MCAM chr11 119185199 - CAMK1 chr3 9804897 - Exonic hg19 GBM TCGA-06-2559-01A 2 0 Out-of-frame Inter-chr q23.3 p25.3 27692 ChimerSeq STARFusion TCGA_RNA-Seq POLR1D-CEBPZ POLR1D chr13 28196146 + CEBPZ chr2 37439182 - Exonic hg19 GBM TCGA-06-2559-01A 2 0 In-Frame Inter-chr q12.2 p22.2 Transcription factor 27693 ChimerSeq STARFusion TCGA_RNA-Seq PRKD3-UBA2 PRKD3 chr2 37543380 - UBA2 chr19 34942886 + Exonic hg19 GBM TCGA-06-2559-01A 2 0 Out-of-frame Inter-chr p22.2 q13.11 27694 ChimerSeq STARFusion TCGA_RNA-Seq RBM14-C11orf80 RBM14 chr11 66384528 + C11orf80 chr11 66526514 + Exonic hg19 GBM TCGA-06-2559-01A 2 0 In-Frame Intra-chr q13.2 Tumor suppressor gene q13.2 27695 ChimerSeq STARFusion TCGA_RNA-Seq RPL28-CCDC106 RPL28 chr19 55898061 + CCDC106 chr19 56160774 + Exonic hg19 GBM TCGA-06-2559-01A 2 0 In-Frame Intra-chr q13.42 q13.42 27696 ChimerSeq STARFusion TCGA_RNA-Seq TCF4-RAB1A TCF4 chr18 53017590 - RAB1A chr2 65315824 - Exonic hg19 GBM TCGA-06-2559-01A 2 0 In-Frame Inter-chr q21.2 Tumor suppressor gene Transcription factor p14 27697 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN31-AVIL TSPAN31 chr12 58140914 + AVIL chr12 58191778 - Exonic hg19 GBM TCGA-06-2559-01A 2 0 In-Frame Intra-chr q14.1 q14.1 Seq+ 27698 ChimerSeq STARFusion TCGA_RNA-Seq TTLL7-ANKRD6 TTLL7 chr1 84464614 - ANKRD6 chr6 90305635 + Exonic hg19 GBM TCGA-06-2559-01A 2 0 5'UTR-CDS Inter-chr p31.1 q15 27699 ChimerSeq STARFusion TCGA_RNA-Seq USP19-YARS USP19 chr3 49155090 - YARS chr1 33252048 - Exonic hg19 GBM TCGA-06-2559-01A 2 0 In-Frame Inter-chr p21.31 p35.1 27700 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM5-EIF2B3 ZSWIM5 chr1 45553553 - EIF2B3 chr1 45392411 - Exonic hg19 GBM TCGA-06-0649-01B 24 16 In-Frame Intra-chr p34.1 p34.1 Seq+ 27701 ChimerSeq STARFusion TCGA_RNA-Seq C22orf29-CLTCL1 C22orf29 chr22 19841966 - CLTCL1 chr22 19178947 - Exonic hg19 GBM TCGA-06-0649-01B 4 7 5'UTR-CDS Intra-chr q11.21 q11.21 27702 ChimerSeq STARFusion TCGA_RNA-Seq GNB1L-CLTCL1 GNB1L chr22 19841966 - CLTCL1 chr22 19178947 - Exonic hg19 GBM TCGA-06-0649-01B 4 7 5'UTR-CDS Intra-chr q11.21 q11.21 27703 ChimerSeq STARFusion TCGA_RNA-Seq MTMR2-DPM1 MTMR2 chr11 95598765 - DPM1 chr20 49551773 - Exonic hg19 GBM TCGA-06-0649-01B 2 2 Out-of-frame Inter-chr q21 q13.13 Seq+ 27704 ChimerSeq STARFusion TCGA_RNA-Seq CYSTM1-GNPDA1 CYSTM1 chr5 139574237 + GNPDA1 chr5 141391606 - Exonic hg19 GBM TCGA-06-0649-01B 2 1 CDS-5'UTR Intra-chr q31.3 q31.3 Seq+ 27705 ChimerSeq STARFusion TCGA_RNA-Seq DGCR6-TANGO2 DGCR6 chr22 18898541 + TANGO2 chr22 20039988 + Exonic hg19 GBM TCGA-06-0649-01B 2 1 Out-of-frame Intra-chr q11.21 q11.21 27706 ChimerSeq STARFusion TCGA_RNA-Seq SPATA24-CNNM3 SPATA24 chr5 138737444 - CNNM3 chr2 97490795 + Exonic hg19 GBM TCGA-06-0649-01B 2 1 In-Frame Inter-chr q31.2 q11.2 27707 ChimerSeq STARFusion TCGA_RNA-Seq AFF4-CTNNA2 AFF4 chr5 132298951 - CTNNA2 chr2 80772107 + Exonic hg19 GBM TCGA-06-0649-01B 2 0 5'UTR-CDS Inter-chr q31.1 p12 Tumor suppressor gene 27708 ChimerSeq STARFusion TCGA_RNA-Seq SAT1-PCBP2 SAT1 chrX 23802000 + PCBP2 chr12 53862564 + Exonic hg19 GBM TCGA-06-0649-01B 2 0 In-Frame Inter-chr p22.11 q13.13 27709 ChimerSeq STARFusion TCGA_RNA-Seq MYL6B-VWA3A MYL6B chr12 56547876 + VWA3A chr16 22161108 + Exonic hg19 GBM TCGA-06-0156-01A 53 35 Out-of-frame Inter-chr q13.2 Seq+ 27710 ChimerSeq STARFusion TCGA_RNA-Seq NBAS-C2orf82 NBAS chr2 15691617 - C2orf82 chr2 233734995 + Exonic hg19 GBM TCGA-06-0156-01A 35 19 CDS-5'UTR Intra-chr p24.3 q37.1 Seq+ 27711 ChimerSeq STARFusion TCGA_RNA-Seq NBAS-C2orf82 NBAS chr2 15691617 - C2orf82 chr2 233740650 + Exonic hg19 GBM TCGA-06-0156-01A 15 19 In-Frame Intra-chr p24.3 q37.1 Seq+ 27712 ChimerSeq STARFusion TCGA_RNA-Seq CHID1-CORO7 CHID1 chr11 910775 - CORO7 chr16 4438632 - Exonic hg19 GBM TCGA-06-0156-01A 13 2 5'UTR-CDS Inter-chr p15.5 p13.3 Seq+ 27713 ChimerSeq STARFusion TCGA_RNA-Seq RFX4-RIC8B RFX4 chr12 107002661 + RIC8B chr12 107208474 + Exonic hg19 GBM TCGA-06-0156-01A 5 9 Out-of-frame Intra-chr q23.3 Transcription factor q23.3 27714 ChimerSeq STARFusion TCGA_RNA-Seq CHID1-CORO7 CHID1 chr11 908545 - CORO7 chr16 4438635 - Exonic hg19 GBM TCGA-06-0156-01A 3 2 Out-of-frame Inter-chr p15.5 p13.3 Seq+ 27715 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L2-NBAS DIS3L2 chr2 233164829 + NBAS chr2 15523441 - Exonic hg19 GBM TCGA-06-0156-01A 3 2 In-Frame Intra-chr q37.1 p24.3 Seq+ 27716 ChimerSeq STARFusion TCGA_RNA-Seq PDGFRA-SCFD2 PDGFRA chr4 55095582 + SCFD2 chr4 54140168 - Exonic hg19 GBM TCGA-06-0156-01A 3 1 5'UTR-CDS Intra-chr q12 Oncogene q12 Seq+ 27717 ChimerSeq STARFusion TCGA_RNA-Seq LOC100507266-MSX1 LOC100507266 chr4 4651269 + MSX1 chr4 4864428 + Exonic hg19 GBM TCGA-06-0156-01A 2 0 5'UTR-CDS Intra-chr p16.2 Transcription factor 27718 ChimerSeq STARFusion TCGA_RNA-Seq MPLKIP-C7orf10 MPLKIP chr7 40173828 - C7orf10 chr7 40356359 + Exonic hg19 GBM TCGA-06-0156-01A 2 0 In-Frame Intra-chr p14.1 27719 ChimerSeq STARFusion TCGA_RNA-Seq RASA3-PKD1P1 RASA3 chr13 114806476 - PKD1P1 chr16 16442554 + Exonic hg19 GBM TCGA-06-0156-01A 2 0 CDS-5'UTR Inter-chr 27720 ChimerSeq STARFusion TCGA_RNA-Seq UBE2N-LOC643339 UBE2N chr12 93835631 - LOC643339 chr12 93721831 - Exonic hg19 GBM TCGA-06-0156-01A 2 0 CDS-3'UTR Intra-chr q22 27721 ChimerSeq STARFusion TCGA_RNA-Seq ZEB1-ZNF438 ZEB1 chr10 31750166 + ZNF438 chr10 31230580 - Exonic hg19 GBM TCGA-06-0156-01A 2 0 CDS-5'UTR Intra-chr p11.22 Transcription factor p11.23 Transcription factor Seq+ 27722 ChimerSeq STARFusion TCGA_RNA-Seq ZNF736-CHMP1A ZNF736 chr7 63797360 + CHMP1A chr16 89713739 - Exonic hg19 GBM TCGA-06-0156-01A 2 0 In-Frame Inter-chr q11.21 Transcription factor q24.3 27723 ChimerSeq STARFusion TCGA_RNA-Seq CDC42BPA-HYOU1 CDC42BPA chr1 227400837 - HYOU1 chr11 118920549 - Exonic hg19 GBM TCGA-32-1982-01A 6 1 In-Frame Inter-chr q42.13 Seq+ 27724 ChimerSeq STARFusion TCGA_RNA-Seq MT1IP-MT3 MT1IP chr16 56711026 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-32-1982-01A 3 0 5'UTR-CDS Intra-chr q13 27725 ChimerSeq STARFusion TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152480272 + Exonic hg19 GBM TCGA-32-1982-01A 2 0 Out-of-frame Intra-chr q36.1 Seq+ 27726 ChimerSeq STARFusion TCGA_RNA-Seq HN1-SRRM2 HN1 chr17 73150437 - SRRM2 chr16 2809570 + Exonic hg19 GBM TCGA-32-1982-01A 2 0 In-Frame Inter-chr p13.3 27727 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-32-1982-01A 2 0 5'UTR-CDS Intra-chr q13 q13 27728 ChimerSeq STARFusion TCGA_RNA-Seq CREB5-KCNH2 CREB5 chr7 28610155 + KCNH2 chr7 150646137 - Exonic hg19 GBM TCGA-27-2528-01A 40 42 Out-of-frame Intra-chr p15.1 Transcription factor q36.1 Seq+ 27729 ChimerSeq STARFusion TCGA_RNA-Seq CREB5-KCNH2 CREB5 chr7 28610155 + KCNH2 chr7 150647508 - Exonic hg19 GBM TCGA-27-2528-01A 6 42 Out-of-frame Intra-chr p15.1 Transcription factor q36.1 Seq+ 27730 ChimerSeq STARFusion TCGA_RNA-Seq ERRFI1-VAMP3 ERRFI1 chr1 8086218 - VAMP3 chr1 7837220 + Exonic hg19 GBM TCGA-27-2528-01A 11 6 5'UTR-CDS Intra-chr p36.23 Tumor suppressor gene p36.23 Seq+ 27731 ChimerSeq STARFusion TCGA_RNA-Seq IGFBP4-LINC00595 IGFBP4 chr17 38610314 + LINC00595 chr10 80039352 + Exonic hg19 GBM TCGA-27-2528-01A 3 1 Out-of-frame Inter-chr q21.2 Tumor suppressor gene 27732 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-27-2528-01A 3 1 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 27733 ChimerSeq STARFusion TCGA_RNA-Seq CREB5-CEP41 CREB5 chr7 28610155 + CEP41 chr7 130067859 - Exonic hg19 GBM TCGA-27-2528-01A 2 3 Out-of-frame Intra-chr p15.1 Transcription factor q32.2 27734 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 GBM TCGA-27-2528-01A 2 2 CDS-5'UTR Intra-chr q23 Seq+ 27735 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-27-2528-01A 2 0 5'UTR-CDS Intra-chr q13 q13 27736 ChimerSeq STARFusion TCGA_RNA-Seq POLR2J3-PTPRZ1 POLR2J3 chr7 102180462 - PTPRZ1 chr7 121568210 + Exonic hg19 GBM TCGA-27-2528-01A 2 0 3'UTR-CDS Intra-chr q22.1 q31.32 27737 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-PSPH EGFR chr7 55268106 + PSPH chr7 56079562 - Exonic hg19 GBM TCGA-28-5215-01A 4 1 In-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 27738 ChimerSeq STARFusion TCGA_RNA-Seq CLU-ID3 CLU chr8 27455630 - ID3 chr1 23884823 - Exonic hg19 GBM TCGA-28-5215-01A 3 0 Out-of-frame Inter-chr p21.1 Tumor suppressor gene 27739 ChimerSeq STARFusion TCGA_RNA-Seq SF1-GNAS SF1 chr11 64543970 - GNAS chr20 57470667 + Exonic hg19 GBM TCGA-28-5215-01A 2 1 In-Frame Inter-chr q13.1 q13.32 Oncogene Seq+ 27740 ChimerSeq STARFusion TCGA_RNA-Seq BTAF1-HECTD2 BTAF1 chr10 93683847 + HECTD2 chr10 93240851 + Exonic hg19 GBM TCGA-28-5215-01A 2 0 In-Frame Intra-chr q23.32 q23.32 Seq+ 27741 ChimerSeq STARFusion TCGA_RNA-Seq CD40-LAMC3 CD40 chr20 44751395 + LAMC3 chr9 133901672 + Exonic hg19 GBM TCGA-28-5215-01A 2 0 In-Frame Inter-chr q13.12 q34.12 27742 ChimerSeq STARFusion TCGA_RNA-Seq METAP1-EIF4E METAP1 chr4 99917018 + EIF4E chr4 99823133 - Exonic hg19 GBM TCGA-28-5215-01A 2 0 In-Frame Intra-chr q23 q23 Seq+ 27743 ChimerSeq STARFusion TCGA_RNA-Seq PFN2-RNF13 PFN2 chr3 149686145 - RNF13 chr3 149677843 + Exonic hg19 GBM TCGA-28-5215-01A 2 0 In-Frame Intra-chr q25.1 q25.1 27744 ChimerSeq STARFusion TCGA_RNA-Seq QKI-HABP4 QKI chr6 163836367 + HABP4 chr9 99246744 + Exonic hg19 GBM TCGA-28-5215-01A 2 0 Out-of-frame Inter-chr q26 q22.32 27745 ChimerSeq STARFusion TCGA_RNA-Seq SLC3A2-C11orf31 SLC3A2 chr11 62653080 + C11orf31 chr11 57510335 + Exonic hg19 GBM TCGA-28-5215-01A 2 0 CDS-3'UTR Intra-chr q12.3 27746 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 GBM TCGA-28-5215-01A 2 0 In-Frame Intra-chr p11.21 p11.21 27747 ChimerSeq STARFusion TCGA_RNA-Seq MRC2-RND2 MRC2 chr17 60705281 + RND2 chr17 41177977 + Exonic hg19 GBM TCGA-27-2524-01A 71 10 Out-of-frame Intra-chr q23.2 q21.31 Seq+ 27748 ChimerSeq STARFusion TCGA_RNA-Seq MEF2D-ZDHHC5 MEF2D chr1 156438572 - ZDHHC5 chr11 57449894 + Exonic hg19 GBM TCGA-27-2524-01A 7 4 In-Frame Inter-chr q22 Transcription factor q12.1 Seq+ 27749 ChimerSeq STARFusion TCGA_RNA-Seq WSB1-MED1 WSB1 chr17 25621461 + MED1 chr17 37576171 - Exonic hg19 GBM TCGA-27-2524-01A 4 7 Out-of-frame Intra-chr q11.1 q12 Tumor suppressor gene Seq+ 27750 ChimerSeq STARFusion TCGA_RNA-Seq WSB1-MED1 WSB1 chr17 25621461 + MED1 chr17 37571592 - Exonic hg19 GBM TCGA-27-2524-01A 3 7 In-Frame Intra-chr q11.1 q12 Tumor suppressor gene Seq+ 27751 ChimerSeq STARFusion TCGA_RNA-Seq ATP8B5P-ZFAND6 ATP8B5P chr9 35449945 + ZFAND6 chr15 80414095 + Exonic hg19 GBM TCGA-27-2524-01A 3 0 Out-of-frame Inter-chr p13.3 q25.1 Seq+ 27752 ChimerSeq STARFusion TCGA_RNA-Seq WBP1L-SUFU WBP1L chr10 104569811 + SUFU chr10 104352339 + Exonic hg19 GBM TCGA-27-2524-01A 2 3 In-Frame Intra-chr q24.32 q24.32 Oncogene Tumor suppressor gene Seq+ 27753 ChimerSeq STARFusion TCGA_RNA-Seq DBF4-GLUL DBF4 chr7 87507540 + GLUL chr1 182355022 - Exonic hg19 GBM TCGA-27-2524-01A 2 0 Out-of-frame Inter-chr q21.12 q25.3 Seq+ 27754 ChimerSeq STARFusion TCGA_RNA-Seq DNM3-MAGED1 DNM3 chr1 172002405 + MAGED1 chrX 51645242 + Exonic hg19 GBM TCGA-27-2524-01A 2 0 CDS-3'UTR Inter-chr q24.3 p11.22 27755 ChimerSeq STARFusion TCGA_RNA-Seq EEF2-SHD EEF2 chr19 3979327 - SHD chr19 4282867 + Exonic hg19 GBM TCGA-27-2524-01A 2 0 In-Frame Intra-chr p13.3 p13.3 27756 ChimerSeq STARFusion TCGA_RNA-Seq GRB10-SERPINB6 GRB10 chr7 50823584 - SERPINB6 chr6 2959576 - Exonic hg19 GBM TCGA-27-2524-01A 2 0 5'UTR-5'UTR Inter-chr p12.1 p25.2 27757 ChimerSeq STARFusion TCGA_RNA-Seq HIVEP3-TIPIN HIVEP3 chr1 42041215 - TIPIN chr15 66633694 - Exonic hg19 GBM TCGA-27-2524-01A 2 0 Out-of-frame Inter-chr p34.2 Tumor suppressor gene Transcription factor q22.31 27758 ChimerSeq STARFusion TCGA_RNA-Seq KRT75-VIM KRT75 chr12 52822040 - VIM chr10 17277845 + Exonic hg19 GBM TCGA-27-2524-01A 2 0 In-Frame Inter-chr q13.13 p13 Tumor suppressor gene 27759 ChimerSeq STARFusion TCGA_RNA-Seq MED13-MARCH10 MED13 chr17 60059559 - 2019_ 3_ 10_ chr17 60782942 - Exonic hg19 GBM TCGA-27-2524-01A 2 0 Out-of-frame Intra-chr q23.2 q23.2 27760 ChimerSeq STARFusion TCGA_RNA-Seq NTPCR-LRRC28 NTPCR chr1 233092189 + LRRC28 chr15 99926235 + Exonic hg19 GBM TCGA-27-2524-01A 2 0 Out-of-frame Inter-chr q42.2 q26.3 Seq+ 27761 ChimerSeq STARFusion TCGA_RNA-Seq PXMP2-SLC44A2 PXMP2 chr12 133277955 + SLC44A2 chr19 10746999 + Exonic hg19 GBM TCGA-27-2524-01A 2 0 In-Frame Inter-chr q24.33 p13.2 27762 ChimerSeq STARFusion TCGA_RNA-Seq EPS15-C1orf185 EPS15 chr1 51984871 - C1orf185 chr1 51578136 + Exonic hg19 GBM TCGA-27-1832-01A 6 3 Out-of-frame Intra-chr p32.3 p32.3 Seq+ 27763 ChimerSeq STARFusion TCGA_RNA-Seq EXT2-RPLP0P2 EXT2 chr11 44135851 + RPLP0P2 chr11 61396314 + Exonic hg19 GBM TCGA-27-1832-01A 3 2 CDS-5'UTR Intra-chr p11.2 Oncogene Tumor suppressor gene q12.2 27764 ChimerSeq STARFusion TCGA_RNA-Seq C1orf185-RNF11 C1orf185 chr1 51584473 + RNF11 chr1 51702406 + Exonic hg19 GBM TCGA-27-1832-01A 3 1 CDS-5'UTR Intra-chr p32.3 p32.3 Seq+ 27765 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-27-1832-01A 3 0 5'UTR-CDS Intra-chr q13 q13 27766 ChimerSeq STARFusion TCGA_RNA-Seq NRIP1-SP4 NRIP1 chr21 16437066 - SP4 chr7 21516697 + Exonic hg19 GBM TCGA-27-1832-01A 2 1 5'UTR-CDS Inter-chr q21.1 p15.3 Transcription factor 27767 ChimerSeq STARFusion TCGA_RNA-Seq COA1-PSMB7 COA1 chr7 43769028 - PSMB7 chr9 127119194 - Exonic hg19 GBM TCGA-27-1832-01A 2 0 Out-of-frame Inter-chr p13 q33.3 27768 ChimerSeq STARFusion TCGA_RNA-Seq FAM126B-NDUFB3 FAM126B chr2 201936333 - NDUFB3 chr2 201943604 + Exonic hg19 GBM TCGA-27-1832-01A 2 0 5'UTR-5'UTR Intra-chr q33.1 q33.1 27769 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-27-1832-01A 2 0 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 27770 ChimerSeq STARFusion TCGA_RNA-Seq KCNE4-NOVA1 KCNE4 chr2 223916992 + NOVA1 chr14 26949349 - Exonic hg19 GBM TCGA-27-1832-01A 2 0 5'UTR-CDS Inter-chr q36.1 q12 27771 ChimerSeq STARFusion TCGA_RNA-Seq KDM3A-MFSD1 KDM3A chr2 86697531 + MFSD1 chr3 158543804 + Exonic hg19 GBM TCGA-27-1832-01A 2 0 Out-of-frame Inter-chr p11.2 Tumor suppressor gene q25.32 27772 ChimerSeq STARFusion TCGA_RNA-Seq KPNA7-SMURF1 KPNA7 chr7 98775543 - SMURF1 chr7 98659460 - Exonic hg19 GBM TCGA-27-1832-01A 2 0 Out-of-frame Intra-chr 27773 ChimerSeq STARFusion TCGA_RNA-Seq PARK2-PACRG PARK2 chr6 162864342 - PACRG chr6 163483182 + Exonic hg19 GBM TCGA-27-1832-01A 2 0 In-Frame Intra-chr Tumor suppressor gene q26 Tumor suppressor gene 27774 ChimerSeq STARFusion TCGA_RNA-Seq SLC3A2-DGKZ SLC3A2 chr11 62649538 + DGKZ chr11 46392863 + Exonic hg19 GBM TCGA-27-1832-01A 2 0 Out-of-frame Intra-chr q12.3 p11.2 27775 ChimerSeq STARFusion TCGA_RNA-Seq TIAM1-HMGN1 TIAM1 chr21 32836296 - HMGN1 chr21 40717200 - Exonic hg19 GBM TCGA-27-1832-01A 2 0 5'UTR-CDS Intra-chr q22.11 q22.2 27776 ChimerSeq STARFusion TCGA_RNA-Seq TTC40-PPA2 TTC40 chr10 134694365 - PPA2 chr4 106320321 - Exonic hg19 GBM TCGA-27-1832-01A 2 0 In-Frame Inter-chr q24 27777 ChimerSeq STARFusion TCGA_RNA-Seq WWOX-GNAS WWOX chr16 78466649 + GNAS chr20 57470667 + Exonic hg19 GBM TCGA-27-1832-01A 2 0 Out-of-frame Inter-chr q23.1 Tumor suppressor gene q13.32 Oncogene 27778 ChimerSeq STARFusion TCGA_RNA-Seq MYL6B-VWA3A MYL6B chr12 56547876 + VWA3A chr16 22161108 + Exonic hg19 GBM TCGA-06-0156-01A 45 20 Out-of-frame Inter-chr q13.2 Seq+ 27779 ChimerSeq STARFusion TCGA_RNA-Seq NBAS-C2orf82 NBAS chr2 15691617 - C2orf82 chr2 233734995 + Exonic hg19 GBM TCGA-06-0156-01A 42 20 CDS-5'UTR Intra-chr p24.3 q37.1 Seq+ 27780 ChimerSeq STARFusion TCGA_RNA-Seq CHID1-CORO7 CHID1 chr11 910775 - CORO7 chr16 4438632 - Exonic hg19 GBM TCGA-06-0156-01A 12 4 5'UTR-CDS Inter-chr p15.5 p13.3 Seq+ 27781 ChimerSeq STARFusion TCGA_RNA-Seq NBAS-C2orf82 NBAS chr2 15691617 - C2orf82 chr2 233740650 + Exonic hg19 GBM TCGA-06-0156-01A 5 20 In-Frame Intra-chr p24.3 q37.1 Seq+ 27782 ChimerSeq STARFusion TCGA_RNA-Seq RFX4-RIC8B RFX4 chr12 107002661 + RIC8B chr12 107208474 + Exonic hg19 GBM TCGA-06-0156-01A 8 5 Out-of-frame Intra-chr q23.3 Transcription factor q23.3 27783 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L2-NBAS DIS3L2 chr2 233164829 + NBAS chr2 15523441 - Exonic hg19 GBM TCGA-06-0156-01A 3 3 In-Frame Intra-chr q37.1 p24.3 Seq+ 27784 ChimerSeq STARFusion TCGA_RNA-Seq ZSCAN25-ARPC1B ZSCAN25 chr7 99221803 + ARPC1B chr7 98983325 + Exonic hg19 GBM TCGA-06-0156-01A 2 1 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 27785 ChimerSeq STARFusion TCGA_RNA-Seq NUPR1L-LOC645513 NUPR1L chr7 56183708 - LOC645513 chr4 120381338 + Exonic hg19 GBM TCGA-06-0156-01A 2 0 Out-of-frame Inter-chr 27786 ChimerSeq STARFusion TCGA_RNA-Seq ZFP106-TGM7 ZFP106 chr15 42720216 - TGM7 chr15 43572149 - Exonic hg19 GBM TCGA-06-5410-01A 3 2 Out-of-frame Intra-chr q15.3 Oncogene 27787 ChimerSeq STARFusion TCGA_RNA-Seq JAZF1-TAX1BP1 JAZF1 chr7 27880317 - TAX1BP1 chr7 27867357 + Exonic hg19 GBM TCGA-06-5410-01A 2 1 In-Frame Intra-chr p15.1 Transcription factor p15.2 Seq+ 27788 ChimerSeq STARFusion TCGA_RNA-Seq CACNB2-ZBTB1 CACNB2 chr10 18439904 + ZBTB1 chr14 64988205 + Exonic hg19 GBM TCGA-06-5410-01A 2 0 CDS-5'UTR Inter-chr p12.33 q23.3 Transcription factor 27789 ChimerSeq STARFusion TCGA_RNA-Seq MAN1C1-KLC1 MAN1C1 chr1 25944828 + KLC1 chr14 104166992 + Exonic hg19 GBM TCGA-06-5410-01A 2 0 In-Frame Inter-chr p36.11 q32.33 27790 ChimerSeq STARFusion TCGA_RNA-Seq RECK-OCIAD1 RECK chr9 36060152 + OCIAD1 chr4 48859230 + Exonic hg19 GBM TCGA-06-5410-01A 2 0 In-Frame Inter-chr p13.3 Tumor suppressor gene p11 27791 ChimerSeq STARFusion TCGA_RNA-Seq ST7-CAV1 ST7 chr7 116593745 + CAV1 chr7 116199000 + Exonic hg19 GBM TCGA-06-0184-01A 187 97 Out-of-frame Intra-chr q31.2 Tumor suppressor gene q31.2 Tumor suppressor gene Seq+ 27792 ChimerSeq STARFusion TCGA_RNA-Seq SRRT-PPP1R17 SRRT chr7 100479862 + PPP1R17 chr7 31732020 + Exonic hg19 GBM TCGA-06-0184-01A 20 8 CDS-5'UTR Intra-chr q22.1 p14.3 Seq+ 27793 ChimerSeq STARFusion TCGA_RNA-Seq IMMP2L-DYNC1I1 IMMP2L chr7 110526649 - DYNC1I1 chr7 95657487 + Exonic hg19 GBM TCGA-06-0184-01A 9 6 In-Frame Intra-chr q31.1 q21.3 Seq+ 27794 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-06-0184-01A 2 16 In-Frame Intra-chr q13 Tumor suppressor gene q13 27795 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642595 + MT3 chr16 56623782 + Exonic hg19 GBM TCGA-06-0184-01A 2 16 In-Frame Intra-chr q13 Tumor suppressor gene q13 27796 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-06-0184-01A 4 1 5'UTR-CDS Intra-chr q13 q13 27797 ChimerSeq STARFusion TCGA_RNA-Seq MT1H-MT2A MT1H chr16 56704879 + MT2A chr16 56643206 + Exonic hg19 GBM TCGA-06-0184-01A 4 0 Out-of-frame Intra-chr q13 q13 Tumor suppressor gene 27798 ChimerSeq STARFusion TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152480272 + Exonic hg19 GBM TCGA-06-0184-01A 2 0 Out-of-frame Intra-chr q36.1 Seq+ 27799 ChimerSeq STARFusion TCGA_RNA-Seq GALNS-ECI1 GALNS chr16 88923166 - ECI1 chr16 2293440 - Exonic hg19 GBM TCGA-06-0184-01A 2 0 In-Frame Intra-chr q24.3 p13.3 27800 ChimerSeq STARFusion TCGA_RNA-Seq MT1DP-MT3 MT1DP chr16 56678088 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-06-0184-01A 2 0 5'UTR-CDS Intra-chr q13 Tumor suppressor gene q13 27801 ChimerSeq STARFusion TCGA_RNA-Seq COBL-SEPT14 COBL chr7 51203855 - SEPT14 chr7 55886916 - Exonic hg19 GBM TCGA-28-5208-01A 28 13 In-Frame Intra-chr p12.1 p11.2 Seq+ 27802 ChimerSeq STARFusion TCGA_RNA-Seq LANCL2-PSPH LANCL2 chr7 55433922 + PSPH chr7 56079562 - Exonic hg19 GBM TCGA-28-5208-01A 18 4 In-Frame Intra-chr p11.2 p11.2 Seq+ 27803 ChimerSeq STARFusion TCGA_RNA-Seq YAE1D1-RALA YAE1D1 chr7 39610226 + RALA chr7 39726230 + Exonic hg19 GBM TCGA-28-5208-01A 4 2 CDS-5'UTR Intra-chr p14.1 p14.1 27804 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 GBM TCGA-28-5208-01A 4 0 CDS-5'UTR Intra-chr q23 Seq+ 27805 ChimerSeq STARFusion TCGA_RNA-Seq EGLN2-CYP2B7P1 EGLN2 chr19 41307320 + CYP2B7P1 chr19 41442002 + Exonic hg19 GBM TCGA-28-5208-01A 3 0 CDS-5'UTR Intra-chr q13.2 27806 ChimerSeq STARFusion TCGA_RNA-Seq ABI2-URI1 ABI2 chr2 204193354 + URI1 chr19 30476130 + Exonic hg19 GBM TCGA-28-5208-01A 2 0 Out-of-frame Inter-chr q33.2 Tumor suppressor gene q12 27807 ChimerSeq STARFusion TCGA_RNA-Seq COA1-STK17A COA1 chr7 43769028 - STK17A chr7 43635500 + Exonic hg19 GBM TCGA-28-5208-01A 2 0 Out-of-frame Intra-chr p13 p13 27808 ChimerSeq STARFusion TCGA_RNA-Seq PHKB-NETO2 PHKB chr16 47630442 + NETO2 chr16 47165936 - Exonic hg19 GBM TCGA-28-5208-01A 2 0 In-Frame Intra-chr q12.1 q12.1 27809 ChimerSeq STARFusion TCGA_RNA-Seq SCAF1-TRAPPC6A SCAF1 chr19 50150087 + TRAPPC6A chr19 45668228 - Exonic hg19 GBM TCGA-19-2620-01A 18 22 Out-of-frame Intra-chr q13.33 q13.32 Seq+ 27810 ChimerSeq STARFusion TCGA_RNA-Seq SCAF1-TRAPPC6A SCAF1 chr19 50150087 + TRAPPC6A chr19 45668452 - Exonic hg19 GBM TCGA-19-2620-01A 13 22 Out-of-frame Intra-chr q13.33 q13.32 Seq+ 27811 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-19-2620-01A 7 0 5'UTR-CDS Intra-chr q13 q13 27812 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-19-2620-01A 5 8 In-Frame Intra-chr q13 Tumor suppressor gene q13 27813 ChimerSeq STARFusion TCGA_RNA-Seq GTF2IP1-ABCB1 GTF2IP1 chr7 72569431 + ABCB1 chr7 87150192 - Exonic hg19 GBM TCGA-19-2620-01A 4 3 3'UTR-CDS Intra-chr q11.23 q21.12 27814 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642595 + MT3 chr16 56623782 + Exonic hg19 GBM TCGA-19-2620-01A 2 8 In-Frame Intra-chr q13 Tumor suppressor gene q13 27815 ChimerSeq STARFusion TCGA_RNA-Seq IGF2R-CNTNAP2 IGF2R chr6 160390427 + CNTNAP2 chr7 147964125 + Exonic hg19 GBM TCGA-19-2620-01A 3 1 Out-of-frame Inter-chr q25.3 Oncogene Tumor suppressor gene Tumor suppressor gene 27816 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-19-2620-01A 3 0 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 27817 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-TSPAN31 CTDSP2 chr12 58240155 - TSPAN31 chr12 58140372 + Exonic hg19 GBM TCGA-16-0846-01A 17 10 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 27818 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-OS9 CTDSP2 chr12 58240155 - OS9 chr12 58109543 + Exonic hg19 GBM TCGA-16-0846-01A 12 11 Out-of-frame Intra-chr q14.1 q13.3 27819 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-TSPAN31 CTDSP2 chr12 58240155 - TSPAN31 chr12 58139528 + Exonic hg19 GBM TCGA-16-0846-01A 9 10 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 27820 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-OS9 CTDSP2 chr12 58240155 - OS9 chr12 58088533 + Exonic hg19 GBM TCGA-16-0846-01A 7 11 Out-of-frame Intra-chr q14.1 q13.3 27821 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-16-0846-01A 3 3 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 27822 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-16-0846-01A 3 0 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 27823 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-XRCC6BP1 CTDSP2 chr12 58240155 - XRCC6BP1 chr12 58339411 + Exonic hg19 GBM TCGA-16-0846-01A 2 1 In-Frame Intra-chr q14.1 27824 ChimerSeq STARFusion TCGA_RNA-Seq RAB8B-SNX1 RAB8B chr15 63481947 + SNX1 chr15 64404772 + Exonic hg19 GBM TCGA-16-0846-01A 2 1 Out-of-frame Intra-chr q22.2 q22.31 27825 ChimerSeq STARFusion TCGA_RNA-Seq PNPLA6-EXOSC10 PNPLA6 chr19 7606953 + EXOSC10 chr1 11137005 - Exonic hg19 GBM TCGA-16-0846-01A 2 0 In-Frame Inter-chr p13.2 p36.22 27826 ChimerSeq STARFusion TCGA_RNA-Seq RBM6-LOC100507217 RBM6 chr3 50012825 + LOC100507217 chr15 93428745 + Exonic hg19 GBM TCGA-16-0846-01A 2 0 CDS-5'UTR Inter-chr p21.31 Tumor suppressor gene 27827 ChimerSeq STARFusion TCGA_RNA-Seq FKBP8-SLC1A6 FKBP8 chr19 18644080 - SLC1A6 chr19 15061202 - Exonic hg19 GBM TCGA-14-1034-02B 90 65 Out-of-frame Intra-chr p13.11 p13.12 Seq+ 27828 ChimerSeq STARFusion TCGA_RNA-Seq EIF4A1-PHOSPHO1 EIF4A1 chr17 7478576 + PHOSPHO1 chr17 47302493 - Exonic hg19 GBM TCGA-14-1034-02B 31 74 CDS-5'UTR Intra-chr p13.1 q21.32 Seq+ 27829 ChimerSeq STARFusion TCGA_RNA-Seq EIF4A1-PHOSPHO1 EIF4A1 chr17 7478576 + PHOSPHO1 chr17 47302366 - Exonic hg19 GBM TCGA-14-1034-02B 15 74 In-Frame Intra-chr p13.1 q21.32 Seq+ 27830 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS17-LPAR1 ADAMTS17 chr15 100589062 - LPAR1 chr9 113638002 - Exonic hg19 GBM TCGA-14-1034-02B 18 31 Out-of-frame Inter-chr q26.3 q31.3 Seq+ 27831 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-TXNDC12 ACTN4 chr19 39138547 + TXNDC12 chr1 52507269 - Exonic hg19 GBM TCGA-14-1034-02B 4 8 Out-of-frame Inter-chr p32.3 Seq+ 27832 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-TXNDC12 ACTN4 chr19 39138547 + TXNDC12 chr1 52494302 - Exonic hg19 GBM TCGA-14-1034-02B 2 8 Out-of-frame Inter-chr p32.3 Seq+ 27833 ChimerSeq STARFusion TCGA_RNA-Seq SQRDL-MYH11 SQRDL chr15 45954323 + MYH11 chr16 15815491 - Exonic hg19 GBM TCGA-14-1034-02B 3 1 In-Frame Inter-chr Oncogene 27834 ChimerSeq STARFusion TCGA_RNA-Seq SETD4-RCAN1 SETD4 chr21 37417880 - RCAN1 chr21 35896008 - Exonic hg19 GBM TCGA-14-1034-02B 2 1 In-Frame Intra-chr q22.12 q22.12 27835 ChimerSeq STARFusion TCGA_RNA-Seq ECI1-SUCLG1 ECI1 chr16 2293047 - SUCLG1 chr2 84676876 - Exonic hg19 GBM TCGA-14-1034-02B 2 0 In-Frame Inter-chr p13.3 p11.2 27836 ChimerSeq STARFusion TCGA_RNA-Seq FAM129A-COQ3 FAM129A chr1 184868312 - COQ3 chr6 99831700 - Exonic hg19 GBM TCGA-14-1034-02B 2 0 Out-of-frame Inter-chr q25.3 q16.2 27837 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-14-1034-02B 2 0 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 27838 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-14-1034-02B 2 0 5'UTR-CDS Intra-chr q13 q13 27839 ChimerSeq STARFusion TCGA_RNA-Seq NOL4-DTNA NOL4 chr18 31801984 - DTNA chr18 32374001 + Exonic hg19 GBM TCGA-14-1034-02B 2 0 Out-of-frame Intra-chr q12.1 q12.1 27840 ChimerSeq STARFusion TCGA_RNA-Seq RPS25-HYOU1 RPS25 chr11 118888668 - HYOU1 chr11 118916543 - Exonic hg19 GBM TCGA-14-1034-02B 2 0 Out-of-frame Intra-chr 27841 ChimerSeq STARFusion TCGA_RNA-Seq TMEM206-USP28 TMEM206 chr1 212583767 - USP28 chr11 113686104 - Exonic hg19 GBM TCGA-14-1034-02B 2 0 Out-of-frame Inter-chr q32.3 q23.2 27842 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-MX1 TSFM chr12 58186856 + MX1 chr21 42821064 + Exonic hg19 GBM TCGA-14-1034-02B 2 0 In-Frame Inter-chr q14.1 q22.3 Seq+ 27843 ChimerSeq STARFusion TCGA_RNA-Seq ZBED1-DHRSX ZBED1 chrX 2418352 - DHRSX chrX 2209644 - Exonic hg19 GBM TCGA-14-1034-02B 2 0 5'UTR-CDS Intra-chr p22.33 Transcription factor p22.33 27844 ChimerSeq STARFusion TCGA_RNA-Seq STAG2-PAK3 STAG2 chrX 123191827 + PAK3 chrX 110257056 + Exonic hg19 GBM TCGA-76-4926-01B 20 18 CDS-5'UTR Intra-chr q25 Oncogene q23 STE:STE20 Oncogene Seq+ 27845 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1199-ZYX KIAA1199 chr15 81224380 + ZYX chr7 143085312 + Exonic hg19 GBM TCGA-76-4926-01B 11 9 In-Frame Inter-chr q34 Tumor suppressor gene 27846 ChimerSeq STARFusion TCGA_RNA-Seq STAG2-PAK3 STAG2 chrX 123191827 + PAK3 chrX 110255800 + Exonic hg19 GBM TCGA-76-4926-01B 3 18 CDS-5'UTR Intra-chr q25 Oncogene q23 STE:STE20 Oncogene Seq+ 27847 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1199-ZYX KIAA1199 chr15 81224380 + ZYX chr7 143078653 + Exonic hg19 GBM TCGA-76-4926-01B 4 9 CDS-5'UTR Inter-chr q34 Tumor suppressor gene 27848 ChimerSeq STARFusion TCGA_RNA-Seq ACAP3-DVL1 ACAP3 chr1 1243149 - DVL1 chr1 1278138 - Exonic hg19 GBM TCGA-76-4926-01B 6 0 In-Frame Intra-chr p36.33 p36.33 Seq+ 27849 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1199-ZYX KIAA1199 chr15 81224380 + ZYX chr7 143078650 + Exonic hg19 GBM TCGA-76-4926-01B 3 9 CDS-5'UTR Inter-chr q34 Tumor suppressor gene 27850 ChimerSeq STARFusion TCGA_RNA-Seq RAB40C-C16orf11 RAB40C chr16 640433 + C16orf11 chr16 613256 + Exonic hg19 GBM TCGA-76-4926-01B 3 7 CDS-5'UTR Intra-chr p13.3 Seq+ 27851 ChimerSeq STARFusion TCGA_RNA-Seq BMPR1A-LIPA BMPR1A chr10 88516676 + LIPA chr10 91007406 - Exonic hg19 GBM TCGA-76-4926-01B 3 3 5'UTR-5'UTR Intra-chr q23.2 TKL:STKR Oncogene Tumor suppressor gene q23.31 Seq+ 27852 ChimerSeq STARFusion TCGA_RNA-Seq SMARCA1-PGRMC1 SMARCA1 chrX 128599497 - PGRMC1 chrX 118374272 + Exonic hg19 GBM TCGA-76-4926-01B 3 1 Out-of-frame Intra-chr q26.1 q24 Seq+ 27853 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-LOC649395 YWHAE chr17 1268213 - LOC649395 chr7 63894406 + Exonic hg19 GBM TCGA-76-4926-01B 3 0 Out-of-frame Inter-chr p13.3 27854 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-76-4926-01B 2 1 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 27855 ChimerSeq STARFusion TCGA_RNA-Seq CHD2-CCNL2 CHD2 chr15 93444529 + CCNL2 chr1 1326245 - Exonic hg19 GBM TCGA-76-4926-01B 2 0 In-Frame Inter-chr q26.1 p36.33 27856 ChimerSeq STARFusion TCGA_RNA-Seq KRT75-VIM KRT75 chr12 52822040 - VIM chr10 17277845 + Exonic hg19 GBM TCGA-76-4926-01B 2 0 In-Frame Inter-chr q13.13 p13 Tumor suppressor gene 27857 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL9-PICALM OSBPL9 chr1 52082893 + PICALM chr11 85742653 - Exonic hg19 GBM TCGA-76-4926-01B 2 0 Out-of-frame Inter-chr p32.3 q14.2 27858 ChimerSeq STARFusion TCGA_RNA-Seq PIGQ-ERCC1 PIGQ chr16 626254 + ERCC1 chr19 45920155 - Exonic hg19 GBM TCGA-76-4926-01B 2 0 In-Frame Inter-chr p13.3 q13.32 Oncogene 27859 ChimerSeq STARFusion TCGA_RNA-Seq RSU1-CELF2 RSU1 chr10 16794538 - CELF2 chr10 11356102 + Exonic hg19 GBM TCGA-76-4926-01B 2 0 In-Frame Intra-chr p13 p14 27860 ChimerSeq STARFusion TCGA_RNA-Seq SDCCAG8-USP3 SDCCAG8 chr1 243419542 + USP3 chr15 63821213 + Exonic hg19 GBM TCGA-76-4926-01B 2 0 CDS-5'UTR Inter-chr q22.31 27861 ChimerSeq STARFusion TCGA_RNA-Seq TTLL5-IFT43 TTLL5 chr14 76368567 + IFT43 chr14 76488670 + Exonic hg19 GBM TCGA-76-4926-01B 2 0 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 27862 ChimerSeq STARFusion TCGA_RNA-Seq OTUD7A-ASCC3 OTUD7A chr15 31862221 - ASCC3 chr6 100988263 - Exonic hg19 GBM TCGA-27-2526-01A 8 4 Out-of-frame Inter-chr q13.3 q16.3 Seq+ 27863 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-27-2526-01A 8 0 5'UTR-CDS Intra-chr q13 q13 27864 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-27-2526-01A 3 1 In-Frame Intra-chr q13 Tumor suppressor gene q13 27865 ChimerSeq STARFusion TCGA_RNA-Seq FHL1-LOC100128164 FHL1 chrX 135290105 + LOC100128164 chr3 169664088 - Exonic hg19 GBM TCGA-27-2526-01A 3 0 Out-of-frame Inter-chr q26.3 Tumor suppressor gene 27866 ChimerSeq STARFusion TCGA_RNA-Seq MUM1-TSPAN3 MUM1 chr19 1377039 + TSPAN3 chr15 77339013 - Exonic hg19 GBM TCGA-27-2526-01A 3 0 Out-of-frame Inter-chr p13.3 Tumor suppressor gene q24.3 27867 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-27-2526-01A 2 1 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 27868 ChimerSeq STARFusion TCGA_RNA-Seq ATP9A-PICALM ATP9A chr20 50312632 - PICALM chr11 85742653 - Exonic hg19 GBM TCGA-27-2526-01A 2 0 In-Frame Inter-chr q13.2 q14.2 Seq+ 27869 ChimerSeq STARFusion TCGA_RNA-Seq CAND1-AVIL CAND1 chr12 67663565 + AVIL chr12 58197174 - Exonic hg19 GBM TCGA-27-2526-01A 2 0 In-Frame Intra-chr q14.3 q14.1 27870 ChimerSeq STARFusion TCGA_RNA-Seq DTWD1-PLAC8L1 DTWD1 chr15 49917628 + PLAC8L1 chr5 145465160 - Exonic hg19 GBM TCGA-27-2526-01A 2 0 Out-of-frame Inter-chr q21.2 q32 27871 ChimerSeq STARFusion TCGA_RNA-Seq FAM208B-GET4 FAM208B chr10 5727138 + GET4 chr7 925693 + Exonic hg19 GBM TCGA-27-2526-01A 2 0 5'UTR-CDS Inter-chr p15.1 p22.3 27872 ChimerSeq STARFusion TCGA_RNA-Seq GLTSCR2-DHX34 GLTSCR2 chr19 48249040 + DHX34 chr19 47885237 + Exonic hg19 GBM TCGA-27-2526-01A 2 0 Out-of-frame Intra-chr Tumor suppressor gene q13.32 27873 ChimerSeq STARFusion TCGA_RNA-Seq MKLN1-HNRNPD MKLN1 chr7 130827700 + HNRNPD chr4 83280792 - Exonic hg19 GBM TCGA-27-2526-01A 2 0 In-Frame Inter-chr q32.3 q21.22 27874 ChimerSeq STARFusion TCGA_RNA-Seq MT1E-MT3 MT1E chr16 56660443 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-27-2526-01A 2 0 In-Frame Intra-chr q13 q13 27875 ChimerSeq STARFusion TCGA_RNA-Seq NTRK3-CAMTA1 NTRK3 chr15 88576088 - CAMTA1 chr1 6947714 + Exonic hg19 GBM TCGA-27-2526-01A 2 0 Out-of-frame Inter-chr q25.3 Oncogene Tumor suppressor gene p36.31 Tumor suppressor gene Transcription factor 27876 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC1-ITGB4 SMARCC1 chr3 47676680 - ITGB4 chr17 73744922 + Exonic hg19 GBM TCGA-27-2526-01A 2 0 In-Frame Inter-chr p21.31 Tumor suppressor gene q25.1 Seq+ 27877 ChimerSeq STARFusion TCGA_RNA-Seq SNTA1-RAD23A SNTA1 chr20 32026647 - RAD23A chr19 13063503 + Exonic hg19 GBM TCGA-27-2526-01A 2 0 Out-of-frame Inter-chr q11.21 p13.13 27878 ChimerSeq STARFusion TCGA_RNA-Seq CP-AGGF1 CP chr3 148939434 - AGGF1 chr5 76357528 + Exonic hg19 GBM TCGA-02-0047-01A 2 0 In-Frame Inter-chr q25.1 q13.3 27879 ChimerSeq STARFusion TCGA_RNA-Seq EFCAB2-KIF26B EFCAB2 chr1 245246990 + KIF26B chr1 245530136 + Exonic hg19 GBM TCGA-02-0047-01A 2 0 Out-of-frame Intra-chr q44 27880 ChimerSeq STARFusion TCGA_RNA-Seq PCDHGC3-QKI PCDHGC3 chr5 140858113 + QKI chr6 163956014 + Exonic hg19 GBM TCGA-06-0129-01A 89 42 In-Frame Inter-chr q31.3 Tumor suppressor gene q26 Seq+ 27881 ChimerSeq STARFusion TCGA_RNA-Seq TFEB-DIP2B TFEB chr6 41703088 - DIP2B chr12 51116985 + Exonic hg19 GBM TCGA-06-0129-01A 72 52 5'UTR-CDS Inter-chr p21.1 Transcription factor q13.12 Seq+ 27882 ChimerSeq STARFusion TCGA_RNA-Seq DNAH8-TMEM217 DNAH8 chr6 38919296 + TMEM217 chr6 37180772 - Exonic hg19 GBM TCGA-06-0129-01A 59 48 CDS-3'UTR Intra-chr p21.2 p21.2 Seq+ 27883 ChimerSeq STARFusion TCGA_RNA-Seq CCDC167-CPNE5 CCDC167 chr6 37467598 - CPNE5 chr6 36733153 - Exonic hg19 GBM TCGA-06-0129-01A 69 4 Out-of-frame Intra-chr p21.2 p21.2 Seq+ 27884 ChimerSeq STARFusion TCGA_RNA-Seq NAA15-LPAR1 NAA15 chr4 140222985 + LPAR1 chr9 113638002 - Exonic hg19 GBM TCGA-06-0129-01A 47 34 Out-of-frame Inter-chr q31.1 q31.3 Seq+ 27885 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-KIF5A FRS2 chr12 69864310 + KIF5A chr12 57957222 + Exonic hg19 GBM TCGA-06-0129-01A 39 24 5'UTR-CDS Intra-chr q15 q13.3 Seq+ 27886 ChimerSeq STARFusion TCGA_RNA-Seq NDUFA4L2-AVIL NDUFA4L2 chr12 57634462 - AVIL chr12 58197174 - Exonic hg19 GBM TCGA-06-0129-01A 42 10 5'UTR-CDS Intra-chr q13.3 q14.1 Seq+ 27887 ChimerSeq STARFusion TCGA_RNA-Seq SBNO1-DIP2B SBNO1 chr12 123778980 - DIP2B chr12 51125152 + Exonic hg19 GBM TCGA-06-0129-01A 29 20 3'UTR-CDS Intra-chr q24.31 q13.12 27888 ChimerSeq STARFusion TCGA_RNA-Seq PCBP2-UHRF1BP1L PCBP2 chr12 53861077 + UHRF1BP1L chr12 100482873 - Exonic hg19 GBM TCGA-06-0129-01A 29 8 Out-of-frame Intra-chr q13.13 q23.1 Seq+ 27889 ChimerSeq STARFusion TCGA_RNA-Seq TFEB-DIP2B TFEB chr6 41700387 - DIP2B chr12 51116985 + Exonic hg19 GBM TCGA-06-0129-01A 17 52 5'UTR-CDS Inter-chr p21.1 Transcription factor q13.12 Seq+ 27890 ChimerSeq STARFusion TCGA_RNA-Seq ANKS1A-TFAP2D ANKS1A chr6 35021942 + TFAP2D chr6 50740358 + Exonic hg19 GBM TCGA-06-0129-01A 29 1 Out-of-frame Intra-chr p21.31 p12.3 Transcription factor Seq+ 27891 ChimerSeq STARFusion TCGA_RNA-Seq COQ10A-USP5 COQ10A chr12 56663345 + USP5 chr12 6964565 + Exonic hg19 GBM TCGA-06-0129-01A 22 8 In-Frame Intra-chr q13.3 p13.31 Seq+ 27892 ChimerSeq STARFusion TCGA_RNA-Seq TFEB-DIP2B TFEB chr6 41703884 - DIP2B chr12 51116985 + Exonic hg19 GBM TCGA-06-0129-01A 11 52 5'UTR-CDS Inter-chr p21.1 Transcription factor q13.12 Seq+ 27893 ChimerSeq STARFusion TCGA_RNA-Seq CAMKK2-NR2C1 CAMKK2 chr12 121682943 - NR2C1 chr12 95461167 - Exonic hg19 GBM TCGA-06-0129-01A 21 8 CDS-5'UTR Intra-chr q24.31 q22 Transcription factor Seq+ 27894 ChimerSeq STARFusion TCGA_RNA-Seq PPIL1-PGC PPIL1 chr6 36823456 - PGC chr6 41710227 - Exonic hg19 GBM TCGA-06-0129-01A 18 16 3'UTR-CDS Intra-chr p21.2 p21.1 Seq+ 27895 ChimerSeq STARFusion TCGA_RNA-Seq SLC22A23-TNFRSF21 SLC22A23 chr6 3410422 - TNFRSF21 chr6 47221257 - Exonic hg19 GBM TCGA-06-0129-01A 16 21 In-Frame Intra-chr p25.2 p12.3 Seq+ 27896 ChimerSeq STARFusion TCGA_RNA-Seq SLC2A13-ANAPC7 SLC2A13 chr12 40345059 - ANAPC7 chr12 110834257 - Exonic hg19 GBM TCGA-06-0129-01A 16 10 In-Frame Intra-chr q12 q24.11 Seq+ 27897 ChimerSeq STARFusion TCGA_RNA-Seq MDGA1-PTK7 MDGA1 chr6 37623476 - PTK7 chr6 43126555 + Exonic hg19 GBM TCGA-06-0129-01A 16 8 In-Frame Intra-chr p21.2 p21.1 Seq+ 27898 ChimerSeq STARFusion TCGA_RNA-Seq SLC11A2-PFKM SLC11A2 chr12 51386593 - PFKM chr12 48516550 + Exonic hg19 GBM TCGA-06-0129-01A 15 11 Out-of-frame Intra-chr q13.12 q13.11 Seq+ 27899 ChimerSeq STARFusion TCGA_RNA-Seq C6orf106-ANKS1A C6orf106 chr6 34664223 - ANKS1A chr6 35021876 + Exonic hg19 GBM TCGA-06-0129-01A 17 1 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 27900 ChimerSeq STARFusion TCGA_RNA-Seq TTLL11-GGTA1P TTLL11 chr9 124854966 - GGTA1P chr9 124222497 - Exonic hg19 GBM TCGA-06-0129-01A 12 12 CDS-3'UTR Intra-chr q33.2 q33.2 27901 ChimerSeq STARFusion TCGA_RNA-Seq USP49-KCTD20 USP49 chr6 41839302 - KCTD20 chr6 36437829 + Exonic hg19 GBM TCGA-06-0129-01A 12 10 5'UTR-5'UTR Intra-chr p21.1 p21.31 Seq+ 27902 ChimerSeq STARFusion TCGA_RNA-Seq AVIL-HIP1R AVIL chr12 58200143 - HIP1R chr12 123332578 + Exonic hg19 GBM TCGA-06-0129-01A 13 5 In-Frame Intra-chr q14.1 q24.31 Seq+ 27903 ChimerSeq STARFusion TCGA_RNA-Seq MBD6-TREM2 MBD6 chr12 57916794 + TREM2 chr6 41130885 - Exonic hg19 GBM TCGA-06-0129-01A 13 4 5'UTR-5'UTR Inter-chr q13.3 Transcription factor p21.1 27904 ChimerSeq STARFusion TCGA_RNA-Seq NOC4L-SDS NOC4L chr12 132629150 + SDS chr12 113837515 - Exonic hg19 GBM TCGA-06-0129-01A 10 14 CDS-5'UTR Intra-chr q24.33 q24.13 Seq+ 27905 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1033-LGR5 KIAA1033 chr12 105538650 + LGR5 chr12 71928895 + Exonic hg19 GBM TCGA-06-0129-01A 11 7 Out-of-frame Intra-chr q21.1 Seq+ 27906 ChimerSeq STARFusion TCGA_RNA-Seq PPIL1-PGC PPIL1 chr6 36824362 - PGC chr6 41710227 - Exonic hg19 GBM TCGA-06-0129-01A 8 16 Out-of-frame Intra-chr p21.2 p21.1 Seq+ 27907 ChimerSeq STARFusion TCGA_RNA-Seq GTF2H3-PGC GTF2H3 chr12 124123890 + PGC chr6 41705566 - Exonic hg19 GBM TCGA-06-0129-01A 9 7 In-Frame Inter-chr q24.31 p21.1 Seq+ 27908 ChimerSeq STARFusion TCGA_RNA-Seq USP5-SOX5 USP5 chr12 6961454 + SOX5 chr12 24430246 - Exonic hg19 GBM TCGA-06-0129-01A 8 3 CDS-5'UTR Intra-chr p13.31 p12.1 Transcription factor 27909 ChimerSeq STARFusion TCGA_RNA-Seq NOC4L-SDS NOC4L chr12 132630210 + SDS chr12 113837515 - Exonic hg19 GBM TCGA-06-0129-01A 4 14 CDS-5'UTR Intra-chr q24.33 q24.13 Seq+ 27910 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA2-DPY19L2 PPFIA2 chr12 82070570 - DPY19L2 chr12 63954442 - Exonic hg19 GBM TCGA-06-0129-01A 6 4 Out-of-frame Intra-chr q21.31 q14.2 Seq+ 27911 ChimerSeq STARFusion TCGA_RNA-Seq PCDHGC4-QKI PCDHGC4 chr5 140867182 + QKI chr6 163956014 + Exonic hg19 GBM TCGA-06-0129-01A 5 5 In-Frame Inter-chr q31.3 q26 27912 ChimerSeq STARFusion TCGA_RNA-Seq ERC1-PLEKHA8P1 ERC1 chr12 1372331 + PLEKHA8P1 chr12 45570216 - Exonic hg19 GBM TCGA-06-0129-01A 6 0 CDS-3'UTR Intra-chr q12 27913 ChimerSeq STARFusion TCGA_RNA-Seq NCAPD2-ANKS1B NCAPD2 chr12 6604391 + ANKS1B chr12 100219167 - Exonic hg19 GBM TCGA-06-0129-01A 6 0 Out-of-frame Intra-chr p13.31 q23.1 27914 ChimerSeq STARFusion TCGA_RNA-Seq NDUFC1-PCDH10 NDUFC1 chr4 140216886 - PCDH10 chr4 134111296 + Exonic hg19 GBM TCGA-06-0129-01A 6 0 In-Frame Intra-chr q31.1 q28.3 Tumor suppressor gene 27915 ChimerSeq STARFusion TCGA_RNA-Seq GNB3-METAP2 GNB3 chr12 6954966 + METAP2 chr12 95869847 + Exonic hg19 GBM TCGA-06-0129-01A 4 7 In-Frame Intra-chr p13.31 q22 27916 ChimerSeq STARFusion TCGA_RNA-Seq NOC4L-SDS NOC4L chr12 132632524 + SDS chr12 113837515 - Exonic hg19 GBM TCGA-06-0129-01A 2 14 CDS-5'UTR Intra-chr q24.33 q24.13 Seq+ 27917 ChimerSeq STARFusion TCGA_RNA-Seq PLXNC1-APPL2 PLXNC1 chr12 94659001 + APPL2 chr12 105623001 - Exonic hg19 GBM TCGA-06-0129-01A 5 1 In-Frame Intra-chr q22 Tumor suppressor gene q23.3 27918 ChimerSeq STARFusion TCGA_RNA-Seq ARID2-DNAH10 ARID2 chr12 46254732 + DNAH10 chr12 124337753 + Exonic hg19 GBM TCGA-06-0129-01A 5 0 Out-of-frame Intra-chr q12 Oncogene Tumor suppressor gene Transcription factor 27919 ChimerSeq STARFusion TCGA_RNA-Seq SLC31A1-WDR31 SLC31A1 chr9 115983958 + WDR31 chr9 116098720 - Exonic hg19 GBM TCGA-06-0129-01A 5 0 5'UTR-5'UTR Intra-chr q32 q32 27920 ChimerSeq STARFusion TCGA_RNA-Seq SLC11A2-PFKM SLC11A2 chr12 51386593 - PFKM chr12 48501148 + Exonic hg19 GBM TCGA-06-0129-01A 2 11 CDS-5'UTR Intra-chr q13.12 q13.11 Seq+ 27921 ChimerSeq STARFusion TCGA_RNA-Seq SYNGAP1-HSP90AB1 SYNGAP1 chr6 33393680 + HSP90AB1 chr6 44220782 + Exonic hg19 GBM TCGA-06-0129-01A 4 3 Out-of-frame Intra-chr p21.1 Oncogene 27922 ChimerSeq STARFusion TCGA_RNA-Seq TFEB-MTCH1 TFEB chr6 41703088 - MTCH1 chr6 36938470 - Exonic hg19 GBM TCGA-06-0129-01A 4 1 5'UTR-CDS Intra-chr p21.1 Transcription factor p21.2 27923 ChimerSeq STARFusion TCGA_RNA-Seq MDGA1-PTK7 MDGA1 chr6 37626021 - PTK7 chr6 43126555 + Exonic hg19 GBM TCGA-06-0129-01A 2 8 Out-of-frame Intra-chr p21.2 p21.1 Seq+ 27924 ChimerSeq STARFusion TCGA_RNA-Seq SRGAP1-OTOGL SRGAP1 chr12 64238663 + OTOGL chr12 80722445 + Exonic hg19 GBM TCGA-06-0129-01A 4 0 Out-of-frame Intra-chr q14.2 q21.31 27925 ChimerSeq STARFusion TCGA_RNA-Seq UHRF1BP1-EPYC UHRF1BP1 chr6 34791125 + EPYC chr12 91358103 - Exonic hg19 GBM TCGA-06-0129-01A 3 4 Out-of-frame Inter-chr p21.31 q21.33 Seq+ 27926 ChimerSeq STARFusion TCGA_RNA-Seq NUDT3-TDRG1 NUDT3 chr6 34360041 - TDRG1 chr6 40347021 + Exonic hg19 GBM TCGA-06-0129-01A 3 3 CDS-5'UTR Intra-chr p21.31 p21.2 Tumor suppressor gene 27927 ChimerSeq STARFusion TCGA_RNA-Seq YEATS4-EP400 YEATS4 chr12 69756687 + EP400 chr12 132522227 + Exonic hg19 GBM TCGA-06-0129-01A 2 7 Out-of-frame Intra-chr q15 q24.33 Oncogene Seq+ 27928 ChimerSeq STARFusion TCGA_RNA-Seq YEATS4-EP400 YEATS4 chr12 69756687 + EP400 chr12 132527849 + Exonic hg19 GBM TCGA-06-0129-01A 2 7 In-Frame Intra-chr q15 q24.33 Oncogene Seq+ 27929 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-SPDEF ZFAND3 chr6 37787792 + SPDEF chr6 34512261 - Exonic hg19 GBM TCGA-06-0129-01A 3 2 CDS-5'UTR Intra-chr p21.2 p21.31 Transcription factor 27930 ChimerSeq STARFusion TCGA_RNA-Seq ARID2-CCND2 ARID2 chr12 46125097 + CCND2 chr12 4383167 + Exonic hg19 GBM TCGA-06-0129-01A 3 1 CDS-5'UTR Intra-chr q12 Oncogene Tumor suppressor gene Transcription factor p13.32 Oncogene 27931 ChimerSeq STARFusion TCGA_RNA-Seq TRERF1-LRFN2 TRERF1 chr6 42418915 - LRFN2 chr6 40400870 - Exonic hg19 GBM TCGA-06-0129-01A 3 1 5'UTR-5'UTR Intra-chr p21.1 Transcription factor p21.1 27932 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 GBM TCGA-06-0129-01A 2 2 CDS-5'UTR Intra-chr q23 Seq+ 27933 ChimerSeq STARFusion TCGA_RNA-Seq USP49-DAAM2 USP49 chr6 41859532 - DAAM2 chr6 39828704 + Exonic hg19 GBM TCGA-06-0129-01A 2 2 5'UTR-CDS Intra-chr p21.1 p21.2 Seq+ 27934 ChimerSeq STARFusion TCGA_RNA-Seq LGR4-INSC LGR4 chr11 27434336 - INSC chr11 15243023 + Exonic hg19 GBM TCGA-06-0129-01A 2 1 Out-of-frame Intra-chr p14.1 p15.2 27935 ChimerSeq STARFusion TCGA_RNA-Seq TXNRD2-USP14 TXNRD2 chr22 19882930 - USP14 chr18 202880 + Exonic hg19 GBM TCGA-06-0129-01A 2 1 Out-of-frame Inter-chr q11.21 p11.32 27936 ChimerSeq STARFusion TCGA_RNA-Seq BTBD9-TRERF1 BTBD9 chr6 38607576 - TRERF1 chr6 42268487 - Exonic hg19 GBM TCGA-06-0129-01A 2 0 5'UTR-5'UTR Intra-chr p21.2 p21.1 Transcription factor 27937 ChimerSeq STARFusion TCGA_RNA-Seq CCND3-CPNE5 CCND3 chr6 42016239 - CPNE5 chr6 36790874 - Exonic hg19 GBM TCGA-06-0129-01A 2 0 5'UTR-CDS Intra-chr p21.1 p21.2 27938 ChimerSeq STARFusion TCGA_RNA-Seq FGD6-ATP5G2 FGD6 chr12 95566376 - ATP5G2 chr12 54066429 - Exonic hg19 GBM TCGA-06-0129-01A 2 0 Out-of-frame Intra-chr q22 q13.13 27939 ChimerSeq STARFusion TCGA_RNA-Seq FRG1-LOC283788 FRG1 chr4 190883087 + LOC283788 chrUn_gl000219 58989 - Exonic hg19 GBM TCGA-06-0129-01A 2 0 CDS-3'UTR Inter-chr 27940 ChimerSeq STARFusion TCGA_RNA-Seq LARP4-XRCC6BP1 LARP4 chr12 50794811 + XRCC6BP1 chr12 58339411 + Exonic hg19 GBM TCGA-06-0129-01A 2 0 Out-of-frame Intra-chr q13.12 27941 ChimerSeq STARFusion TCGA_RNA-Seq NUDT3-GLI1 NUDT3 chr6 34360041 - GLI1 chr12 57861116 + Exonic hg19 GBM TCGA-06-0129-01A 2 0 In-Frame Inter-chr p21.31 q13.3 Tumor suppressor gene Transcription factor 27942 ChimerSeq STARFusion TCGA_RNA-Seq SH2B3-COQ10A SH2B3 chr12 111844081 + COQ10A chr12 56661578 + Exonic hg19 GBM TCGA-06-0129-01A 2 0 5'UTR-CDS Intra-chr q24.12 Tumor suppressor gene q13.3 27943 ChimerSeq STARFusion TCGA_RNA-Seq SUDS3-EEA1 SUDS3 chr12 118841322 + EEA1 chr12 93251261 - Exonic hg19 GBM TCGA-06-0129-01A 2 0 In-Frame Intra-chr q24.23 q22 Transcription factor 27944 ChimerSeq STARFusion TCGA_RNA-Seq ARID1A-RNF31 ARID1A chr1 27094490 + RNF31 chr14 24624366 + Exonic hg19 GBM TCGA-06-0125-02A 29 21 In-Frame Inter-chr p36.11 Oncogene Tumor suppressor gene q12 Seq+ 27945 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A3-SGTA SLC39A3 chr19 2737046 - SGTA chr19 2765283 - Exonic hg19 GBM TCGA-06-0125-02A 21 11 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 27946 ChimerSeq STARFusion TCGA_RNA-Seq FAM168A-SNX29 FAM168A chr11 73308968 - SNX29 chr16 12571576 + Exonic hg19 GBM TCGA-06-0125-02A 12 6 5'UTR-CDS Inter-chr q13.4 p13.13 Seq+ 27947 ChimerSeq STARFusion TCGA_RNA-Seq FDX1-SLC35E2 FDX1 chr11 110327771 + SLC35E2 chr1 1666274 - Exonic hg19 GBM TCGA-06-0125-02A 11 2 Out-of-frame Inter-chr q22.3 p36.33 Seq+ 27948 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-06-0125-02A 5 3 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 27949 ChimerSeq STARFusion TCGA_RNA-Seq SIAE-HYLS1 SIAE chr11 124539253 - HYLS1 chr11 125761319 + Exonic hg19 GBM TCGA-06-0125-02A 3 7 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 27950 ChimerSeq STARFusion TCGA_RNA-Seq DPY19L1P1-ZFAND3 DPY19L1P1 chr7 32621184 - ZFAND3 chr6 38029369 + Exonic hg19 GBM TCGA-06-0125-02A 4 0 3'UTR-CDS Inter-chr p14.3 p21.2 27951 ChimerSeq STARFusion TCGA_RNA-Seq COX14-SPATS2 COX14 chr12 50506084 + SPATS2 chr12 49854553 + Exonic hg19 GBM TCGA-06-0125-02A 2 3 5'UTR-5'UTR Intra-chr q13.12 q13.12 Seq+ 27952 ChimerSeq STARFusion TCGA_RNA-Seq SNX29-FAM168A SNX29 chr16 12497386 + FAM168A chr11 73179537 - Exonic hg19 GBM TCGA-06-0125-02A 2 3 CDS-5'UTR Inter-chr p13.13 q13.4 27953 ChimerSeq STARFusion TCGA_RNA-Seq DPYSL2-ATP5L DPYSL2 chr8 26441499 + ATP5L chr11 118277652 + Exonic hg19 GBM TCGA-06-0125-02A 2 0 In-Frame Inter-chr p21.2 q23.3 27954 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0368-ARIH2 KIAA0368 chr9 114170851 - ARIH2 chr3 48964895 + Exonic hg19 GBM TCGA-06-0125-02A 2 0 CDS-5'UTR Inter-chr q31.3 p21.31 27955 ChimerSeq STARFusion TCGA_RNA-Seq MACF1-LEPR MACF1 chr1 39550110 + LEPR chr1 65890986 + Exonic hg19 GBM TCGA-06-0125-02A 2 0 CDS-5'UTR Intra-chr p34.3 p31.3 27956 ChimerSeq STARFusion TCGA_RNA-Seq MACF1-LEPROT MACF1 chr1 39550110 + LEPROT chr1 65890986 + Exonic hg19 GBM TCGA-06-0125-02A 2 0 In-Frame Intra-chr p34.3 p31.3 27957 ChimerSeq STARFusion TCGA_RNA-Seq SERINC5-PALLD SERINC5 chr5 79454659 - PALLD chr4 169847364 + Exonic hg19 GBM TCGA-06-0125-02A 2 0 Out-of-frame Inter-chr q14.1 q32.3 27958 ChimerSeq STARFusion TCGA_RNA-Seq SNX32-KLHL18 SNX32 chr11 65601572 + KLHL18 chr3 47361143 + Exonic hg19 GBM TCGA-06-0125-02A 2 0 In-Frame Inter-chr q13.1 p21.31 27959 ChimerSeq STARFusion TCGA_RNA-Seq ZNF550-CXCL17 ZNF550 chr19 58063995 - CXCL17 chr19 42938008 - Exonic hg19 GBM TCGA-32-1970-01A 71 53 Out-of-frame Intra-chr q13.43 Transcription factor q13.2 Seq+ 27960 ChimerSeq STARFusion TCGA_RNA-Seq ZNF544-AP2A1 ZNF544 chr19 58758160 + AP2A1 chr19 50285014 + Exonic hg19 GBM TCGA-32-1970-01A 51 30 In-Frame Intra-chr q13.43 Transcription factor q13.33 Seq+ 27961 ChimerSeq STARFusion TCGA_RNA-Seq ZNF610-RALA ZNF610 chr19 52839759 + RALA chr7 39745722 + Exonic hg19 GBM TCGA-32-1970-01A 41 13 5'UTR-CDS Inter-chr q13.41 Transcription factor p14.1 Seq+ 27962 ChimerSeq STARFusion TCGA_RNA-Seq HIBADH-C7orf10 HIBADH chr7 27668990 - C7orf10 chr7 40789033 + Exonic hg19 GBM TCGA-32-1970-01A 24 44 Out-of-frame Intra-chr p15.2 Seq+ 27963 ChimerSeq STARFusion TCGA_RNA-Seq ZNF773-SNRPD2 ZNF773 chr19 58016154 + SNRPD2 chr19 46190985 - Exonic hg19 GBM TCGA-32-1970-01A 27 10 Out-of-frame Intra-chr q13.43 Transcription factor q13.32 Seq+ 27964 ChimerSeq STARFusion TCGA_RNA-Seq JAZF1-CPT1C JAZF1 chr7 28220082 - CPT1C chr19 50211980 + Exonic hg19 GBM TCGA-32-1970-01A 21 14 Out-of-frame Inter-chr p15.1 Transcription factor q13.33 Seq+ 27965 ChimerSeq STARFusion TCGA_RNA-Seq HIBADH-C7orf10 HIBADH chr7 27668990 - C7orf10 chr7 40723655 + Exonic hg19 GBM TCGA-32-1970-01A 9 44 Out-of-frame Intra-chr p15.2 Seq+ 27966 ChimerSeq STARFusion TCGA_RNA-Seq ZNF419-SNRPD2 ZNF419 chr19 58002965 + SNRPD2 chr19 46190985 - Exonic hg19 GBM TCGA-32-1970-01A 9 11 Out-of-frame Intra-chr q13.43 Transcription factor q13.32 Seq+ 27967 ChimerSeq STARFusion TCGA_RNA-Seq ZNF773-SNRPD2 ZNF773 chr19 58016768 + SNRPD2 chr19 46190985 - Exonic hg19 GBM TCGA-32-1970-01A 7 10 Out-of-frame Intra-chr q13.43 Transcription factor q13.32 Seq+ 27968 ChimerSeq STARFusion TCGA_RNA-Seq JAZF1-CPT1C JAZF1 chr7 28220082 - CPT1C chr19 50216229 + Exonic hg19 GBM TCGA-32-1970-01A 4 14 Out-of-frame Inter-chr p15.1 Transcription factor q13.33 Seq+ 27969 ChimerSeq STARFusion TCGA_RNA-Seq JAZF1-CPT1C JAZF1 chr7 28210262 - CPT1C chr19 50210775 + Exonic hg19 GBM TCGA-32-1970-01A 3 14 Out-of-frame Inter-chr p15.1 Transcription factor q13.33 Seq+ 27970 ChimerSeq STARFusion TCGA_RNA-Seq LINC00265-ANLN LINC00265 chr7 39773643 + ANLN chr7 36465624 + Exonic hg19 GBM TCGA-32-1970-01A 6 2 5'UTR-CDS Intra-chr p14.1 p14.2 27971 ChimerSeq STARFusion TCGA_RNA-Seq AVL9-ZNF544 AVL9 chr7 32535414 + ZNF544 chr19 58772217 + Exonic hg19 GBM TCGA-32-1970-01A 5 3 Out-of-frame Inter-chr p14.3 q13.43 Transcription factor Seq+ 27972 ChimerSeq STARFusion TCGA_RNA-Seq MPLKIP-NLRP11 MPLKIP chr7 40173828 - NLRP11 chr19 56307616 - Exonic hg19 GBM TCGA-32-1970-01A 5 2 Out-of-frame Inter-chr p14.1 q13.43 Seq+ 27973 ChimerSeq STARFusion TCGA_RNA-Seq ELMO1-BLVRA ELMO1 chr7 37488278 - BLVRA chr7 43810737 + Exonic hg19 GBM TCGA-32-1970-01A 4 1 5'UTR-5'UTR Intra-chr p14.1 p13 Seq+ 27974 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-32-1970-01A 3 5 In-Frame Intra-chr q13 Tumor suppressor gene q13 27975 ChimerSeq STARFusion TCGA_RNA-Seq ZNF772-ERCC2 ZNF772 chr19 57988002 - ERCC2 chr19 45860801 - Exonic hg19 GBM TCGA-32-1970-01A 3 4 Out-of-frame Intra-chr q13.43 Transcription factor q13.32 Oncogene Seq+ 27976 ChimerSeq STARFusion TCGA_RNA-Seq ZNF772-ERCC2 ZNF772 chr19 57988002 - ERCC2 chr19 45860957 - Exonic hg19 GBM TCGA-32-1970-01A 3 4 Out-of-frame Intra-chr q13.43 Transcription factor q13.32 Oncogene Seq+ 27977 ChimerSeq STARFusion TCGA_RNA-Seq RHPN2-CHN2 RHPN2 chr19 33481420 - CHN2 chr7 29394241 + Exonic hg19 GBM TCGA-32-1970-01A 3 3 Out-of-frame Inter-chr q13.11 p14.3 Seq+ 27978 ChimerSeq STARFusion TCGA_RNA-Seq ELMO1-BLVRA ELMO1 chr7 37488463 - BLVRA chr7 43810737 + Exonic hg19 GBM TCGA-32-1970-01A 3 1 5'UTR-5'UTR Intra-chr p14.1 p13 Seq+ 27979 ChimerSeq STARFusion TCGA_RNA-Seq FUZ-ZNF528 FUZ chr19 50311671 - ZNF528 chr19 52904938 + Exonic hg19 GBM TCGA-32-1970-01A 3 1 CDS-5'UTR Intra-chr q13.33 q13.41 Transcription factor Seq+ 27980 ChimerSeq STARFusion TCGA_RNA-Seq ZNF260-HECW1 ZNF260 chr19 37016057 - HECW1 chr7 43436413 + Exonic hg19 GBM TCGA-32-1970-01A 2 4 5'UTR-CDS Inter-chr q13.12 Transcription factor p14.1 Seq+ 27981 ChimerSeq STARFusion TCGA_RNA-Seq ZNF260-HECW1 ZNF260 chr19 37019121 - HECW1 chr7 43436413 + Exonic hg19 GBM TCGA-32-1970-01A 2 4 5'UTR-CDS Inter-chr q13.12 Transcription factor p14.1 Seq+ 27982 ChimerSeq STARFusion TCGA_RNA-Seq ATXN7L1-PPP2R2B ATXN7L1 chr7 105516258 - PPP2R2B chr5 146070803 - Exonic hg19 GBM TCGA-32-1970-01A 2 0 In-Frame Inter-chr q22.3 q32 27983 ChimerSeq STARFusion TCGA_RNA-Seq FOXO3-ARMC2 FOXO3 chr6 108883032 + ARMC2 chr6 109274236 + Exonic hg19 GBM TCGA-32-1970-01A 2 0 In-Frame Intra-chr q21 Oncogene Tumor suppressor gene Transcription factor q21 Seq+ 27984 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-14-0781-01B 3 0 5'UTR-CDS Intra-chr q13 q13 27985 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-14-0781-01B 2 0 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 27986 ChimerSeq STARFusion TCGA_RNA-Seq SPATS2-RTF1 SPATS2 chr12 49765073 + RTF1 chr15 41730519 + Exonic hg19 GBM TCGA-14-0781-01B 2 0 5'UTR-CDS Inter-chr q13.12 q15.1 27987 ChimerSeq STARFusion TCGA_RNA-Seq NUDT2-GLIPR2 NUDT2 chr9 34339164 + GLIPR2 chr9 36162359 + Exonic hg19 GBM TCGA-27-2523-01A 26 17 In-Frame Intra-chr p13.3 p13.3 Seq+ 27988 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KC1-LYST RPS6KC1 chr1 213303232 + LYST chr1 235840919 - Exonic hg19 GBM TCGA-27-2523-01A 24 17 Out-of-frame Intra-chr q32.3 q42.3 Seq+ 27989 ChimerSeq STARFusion TCGA_RNA-Seq DLG1-EHHADH DLG1 chr3 196863413 - EHHADH chr3 184966305 - Exonic hg19 GBM TCGA-27-2523-01A 5 1 Out-of-frame Intra-chr q29 Tumor suppressor gene q27.2 Seq+ 27990 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-27-2523-01A 2 1 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 27991 ChimerSeq STARFusion TCGA_RNA-Seq STK4-PI3 STK4 chr20 43653771 + PI3 chr20 43804502 + Exonic hg19 GBM TCGA-27-2523-01A 2 1 Out-of-frame Intra-chr q13.12 q13.12 27992 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 GBM TCGA-27-2523-01A 2 1 CDS-5'UTR Intra-chr p12 p12 Transcription factor 27993 ChimerSeq STARFusion TCGA_RNA-Seq BRCA1-PSME3 BRCA1 chr17 41277294 - PSME3 chr17 40990748 + Exonic hg19 GBM TCGA-27-2523-01A 2 0 5'UTR-CDS Intra-chr q21.31 Oncogene Tumor suppressor gene q21.31 27994 ChimerSeq STARFusion TCGA_RNA-Seq MYL6B-GFAP MYL6B chr12 56549376 + GFAP chr17 42985517 - Exonic hg19 GBM TCGA-27-2523-01A 2 0 In-Frame Inter-chr q13.2 q21.31 27995 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-27-2523-01A 2 0 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 27996 ChimerSeq STARFusion TCGA_RNA-Seq PLEC-OPLAH PLEC chr8 145049345 - OPLAH chr8 145114988 - Exonic hg19 GBM TCGA-27-2523-01A 2 0 CDS-5'UTR Intra-chr q24.3 q24.3 27997 ChimerSeq STARFusion TCGA_RNA-Seq TMSB15B-H2BFXP TMSB15B chrX 103219195 + H2BFXP chrX 103316442 - Exonic hg19 GBM TCGA-27-2523-01A 2 0 CDS-3'UTR Intra-chr q22.2 27998 ChimerSeq STARFusion TCGA_RNA-Seq ZNF253-NDUFA13 ZNF253 chr19 19976808 + NDUFA13 chr19 19636991 + Exonic hg19 GBM TCGA-27-2523-01A 2 0 Out-of-frame Intra-chr p13.11 Transcription factor p13.11 27999 ChimerSeq STARFusion TCGA_RNA-Seq SPECC1L-PPP6R2 SPECC1L chr22 24709434 + PPP6R2 chr22 50852981 + Exonic hg19 GBM TCGA-06-0745-01A 7 3 Out-of-frame Intra-chr q11.23 q13.33 Seq+ 28000 ChimerSeq STARFusion TCGA_RNA-Seq SDF2L1-DEPDC5 SDF2L1 chr22 21998321 + DEPDC5 chr22 32232958 + Exonic hg19 GBM TCGA-06-0745-01A 5 5 In-Frame Intra-chr q11.21 q12.2 28001 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 GBM TCGA-06-0745-01A 6 0 CDS-5'UTR Intra-chr q23 Seq+ 28002 ChimerSeq STARFusion TCGA_RNA-Seq SCG5-FRMD5 SCG5 chr15 32976870 + FRMD5 chr15 44216507 - Exonic hg19 GBM TCGA-06-0745-01A 5 0 In-Frame Intra-chr q15.3 28003 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-06-0745-01A 3 2 In-Frame Intra-chr q13 Tumor suppressor gene q13 28004 ChimerSeq STARFusion TCGA_RNA-Seq MT1B-MT3 MT1B chr16 56686548 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-06-0745-01A 3 0 In-Frame Intra-chr q13 q13 28005 ChimerSeq STARFusion TCGA_RNA-Seq PIPSL-PSMD4 PIPSL chr10 95719389 - PSMD4 chr1 151236472 + Exonic hg19 GBM TCGA-06-0745-01A 3 0 Out-of-frame Inter-chr q23.33 q21.3 28006 ChimerSeq STARFusion TCGA_RNA-Seq GTDC2-HIGD1A GTDC2 chr3 43147328 - HIGD1A chr3 42835767 - Exonic hg19 GBM TCGA-06-0745-01A 2 0 Out-of-frame Intra-chr p22.1 28007 ChimerSeq STARFusion TCGA_RNA-Seq N4BP2L1-STX17 N4BP2L1 chr13 32981387 - STX17 chr9 102729935 + Exonic hg19 GBM TCGA-06-0745-01A 2 0 In-Frame Inter-chr q13.1 q31.1 28008 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-14-0789-01A 5 4 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 28009 ChimerSeq STARFusion TCGA_RNA-Seq HARBI1-PTPRS HARBI1 chr11 46637118 - PTPRS chr19 5246056 - Exonic hg19 GBM TCGA-14-0789-01A 6 0 In-Frame Inter-chr p11.2 p13.3 Seq+ 28010 ChimerSeq STARFusion TCGA_RNA-Seq NF1-RAB11FIP4 NF1 chr17 29592357 + RAB11FIP4 chr17 29844669 + Exonic hg19 GBM TCGA-14-0789-01A 3 1 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 28011 ChimerSeq STARFusion TCGA_RNA-Seq NF1-RAB11FIP4 NF1 chr17 29592357 + RAB11FIP4 chr17 29848184 + Exonic hg19 GBM TCGA-14-0789-01A 2 1 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 28012 ChimerSeq STARFusion TCGA_RNA-Seq HRH1-ATG7 HRH1 chr3 11196240 + ATG7 chr3 11340160 + Exonic hg19 GBM TCGA-14-0789-01A 2 0 5'UTR-5'UTR Intra-chr p25.3 p25.3 Seq+ 28013 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-CYSTM1 MATR3 chr5 138629494 + CYSTM1 chr5 139622890 + Exonic hg19 GBM TCGA-14-0789-01A 2 0 5'UTR-CDS Intra-chr q31.2 q31.3 28014 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-14-0789-01A 2 0 5'UTR-CDS Intra-chr q13 q13 28015 ChimerSeq STARFusion TCGA_RNA-Seq RASSF8-SSPN RASSF8 chr12 26208379 + SSPN chr12 26377226 + Exonic hg19 GBM TCGA-14-0789-01A 2 0 Out-of-frame Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 28016 ChimerSeq STARFusion TCGA_RNA-Seq SNX2-CTNND2 SNX2 chr5 122110906 + CTNND2 chr5 11365002 - Exonic hg19 GBM TCGA-14-0789-01A 2 0 Out-of-frame Intra-chr q23.2 p15.2 28017 ChimerSeq STARFusion TCGA_RNA-Seq TENM4-CLNS1A TENM4 chr11 78614313 - CLNS1A chr11 77340944 - Exonic hg19 GBM TCGA-14-0789-01A 2 0 Out-of-frame Intra-chr q14.1 q14.1 28018 ChimerSeq STARFusion TCGA_RNA-Seq TMOD3-HACE1 TMOD3 chr15 52122033 + HACE1 chr6 105198347 - Exonic hg19 GBM TCGA-14-0789-01A 2 0 5'UTR-CDS Inter-chr q21.2 q16.3 Tumor suppressor gene 28019 ChimerSeq STARFusion TCGA_RNA-Seq EML4-CASK EML4 chr2 42396776 + CASK chrX 41420897 - Exonic hg19 GBM TCGA-06-0158-01A 74 28 In-Frame Inter-chr p21 Oncogene p11.4 CAMK:CASK Seq+ 28020 ChimerSeq STARFusion TCGA_RNA-Seq TCHH-GFAP TCHH chr1 152084652 - GFAP chr17 42988825 - Exonic hg19 GBM TCGA-06-0158-01A 12 0 Out-of-frame Inter-chr q21.3 q21.31 28021 ChimerSeq STARFusion TCGA_RNA-Seq RCAN1-CD180 RCAN1 chr21 35893797 - CD180 chr5 66481845 - Exonic hg19 GBM TCGA-06-0158-01A 3 1 Out-of-frame Inter-chr q22.12 q12.3 Seq+ 28022 ChimerSeq STARFusion TCGA_RNA-Seq RB1-ITM2B RB1 chr13 48881542 + ITM2B chr13 48827944 + Exonic hg19 GBM TCGA-06-0158-01A 3 0 In-Frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Seq+ 28023 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 GBM TCGA-06-0158-01A 3 0 CDS-5'UTR Intra-chr q23 Seq+ 28024 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-06-0158-01A 2 2 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28025 ChimerSeq STARFusion TCGA_RNA-Seq TAMM41-VGLL4 TAMM41 chr3 11850991 - VGLL4 chr3 11744521 - Exonic hg19 GBM TCGA-06-0158-01A 2 0 CDS-5'UTR Intra-chr p25.2 p25.2 28026 ChimerSeq STARFusion TCGA_RNA-Seq METTL21B-INHBE METTL21B chr12 58166911 + INHBE chr12 57849877 + Exonic hg19 GBM TCGA-02-2485-01A 8 8 In-Frame Intra-chr q13.3 Seq+ 28027 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM2-XRCC6BP1 R3HDM2 chr12 57660514 - XRCC6BP1 chr12 58339411 + Exonic hg19 GBM TCGA-02-2485-01A 7 6 In-Frame Intra-chr q13.3 Seq+ 28028 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-XRCC6BP1 CTDSP2 chr12 58240155 - XRCC6BP1 chr12 58339411 + Exonic hg19 GBM TCGA-02-2485-01A 4 0 In-Frame Intra-chr q14.1 28029 ChimerSeq STARFusion TCGA_RNA-Seq CEP170-ADSS CEP170 chr1 243385026 - ADSS chr1 244601070 - Exonic hg19 GBM TCGA-02-2485-01A 3 0 CDS-5'UTR Intra-chr q44 28030 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-02-2485-01A 2 1 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28031 ChimerSeq STARFusion TCGA_RNA-Seq PLD5-KIF26B PLD5 chr1 242687390 - KIF26B chr1 245582881 + Exonic hg19 GBM TCGA-02-2485-01A 2 1 In-Frame Intra-chr q43 28032 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP4-NUDT3 ARHGAP4 chrX 153179232 - NUDT3 chr6 34309749 - Exonic hg19 GBM TCGA-02-2485-01A 2 0 In-Frame Inter-chr q28 p21.31 28033 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55268106 + SEPT14 chr7 55886916 - Exonic hg19 GBM TCGA-02-2485-01A 2 0 In-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 28034 ChimerSeq STARFusion TCGA_RNA-Seq GALK2-FGF7 GALK2 chr15 49612002 + FGF7 chr15 49775348 + Exonic hg19 GBM TCGA-02-2485-01A 2 0 Out-of-frame Intra-chr q21.1 q21.2 28035 ChimerSeq STARFusion TCGA_RNA-Seq HARS2-CDK4 HARS2 chr5 140071341 + CDK4 chr12 58143287 - Exonic hg19 GBM TCGA-02-2485-01A 2 0 Out-of-frame Inter-chr q31.3 q14.1 CMGC:CDK Oncogene 28036 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-02-2485-01A 2 0 In-Frame Intra-chr q13 Tumor suppressor gene q13 28037 ChimerSeq STARFusion TCGA_RNA-Seq NUDCD3-CAMK2B NUDCD3 chr7 44444039 - CAMK2B chr7 44323824 - Exonic hg19 GBM TCGA-02-2485-01A 2 0 Out-of-frame Intra-chr p13 p13 28038 ChimerSeq STARFusion TCGA_RNA-Seq PIP4K2C-LOC100506844 PIP4K2C chr12 57987905 + LOC100506844 chr12 58325520 - Exonic hg19 GBM TCGA-02-2485-01A 2 0 CDS-3'UTR Intra-chr q13.3 28039 ChimerSeq STARFusion TCGA_RNA-Seq PLXNA3-NCOR1 PLXNA3 chrX 153686768 + NCOR1 chr17 16001810 - Exonic hg19 GBM TCGA-02-2485-01A 2 0 5'UTR-CDS Inter-chr q28 p11.2 Oncogene 28040 ChimerSeq STARFusion TCGA_RNA-Seq SPIN1-NXNL2 SPIN1 chr9 91063904 + NXNL2 chr9 91190002 + Exonic hg19 GBM TCGA-02-2485-01A 2 0 CDS-3'UTR Intra-chr q22.1 q22.1 28041 ChimerSeq STARFusion TCGA_RNA-Seq VASN-MEX3C VASN chr16 4421994 + MEX3C chr18 48703946 - Exonic hg19 GBM TCGA-02-2485-01A 2 0 5'UTR-CDS Inter-chr q21.2 28042 ChimerSeq STARFusion TCGA_RNA-Seq ZNF566-PLD6 ZNF566 chr19 36964234 - PLD6 chr17 17106412 - Exonic hg19 GBM TCGA-02-2485-01A 2 0 In-Frame Inter-chr q13.12 Transcription factor p11.2 28043 ChimerSeq STARFusion TCGA_RNA-Seq EBF4-TMC2 EBF4 chr20 2674428 + TMC2 chr20 2621780 + Exonic hg19 GBM TCGA-06-0747-01A 14 7 Out-of-frame Intra-chr p13 Transcription factor p13 Seq+ 28044 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86351941 + Exonic hg19 GBM TCGA-06-0747-01A 2 1 Out-of-frame Intra-chr q21.2 q21.2 28045 ChimerSeq STARFusion TCGA_RNA-Seq RAB3GAP2-SPOCK3 RAB3GAP2 chr1 220445565 - SPOCK3 chr4 167675880 - Exonic hg19 GBM TCGA-06-0747-01A 2 0 In-Frame Inter-chr q41 q32.3 28046 ChimerSeq STARFusion TCGA_RNA-Seq STK33-LMO1 STK33 chr11 8435042 - LMO1 chr11 8252051 - Exonic hg19 GBM TCGA-06-0747-01A 2 0 Out-of-frame Intra-chr p15.4 CAMK:CAMK-Unique p15.4 28047 ChimerSeq STARFusion TCGA_RNA-Seq SLIT1-SFRP5 SLIT1 chr10 98790514 - SFRP5 chr10 99527617 - Exonic hg19 GBM TCGA-12-5299-01A 309 122 Out-of-frame Intra-chr q24.1 q24.2 Tumor suppressor gene Seq+ 28048 ChimerSeq STARFusion TCGA_RNA-Seq MT1A-MT3 MT1A chr16 56673192 + MT3 chr16 56623447 + Exonic hg19 GBM TCGA-12-5299-01A 3 0 Out-of-frame Intra-chr q13 q13 28049 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-VSTM2A EGFR chr7 55087058 + VSTM2A chr7 54612315 + Exonic hg19 GBM TCGA-12-5299-01A 2 2 In-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 28050 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-12-5299-01A 2 1 In-Frame Intra-chr q13 Tumor suppressor gene q13 28051 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-12-5299-01A 2 1 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28052 ChimerSeq STARFusion TCGA_RNA-Seq FBXL4-C6orf165 FBXL4 chr6 99395682 - C6orf165 chr6 88173738 + Exonic hg19 GBM TCGA-12-5299-01A 2 0 5'UTR-CDS Intra-chr q16.2 28053 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-12-5299-01A 2 0 5'UTR-CDS Intra-chr q13 q13 28054 ChimerSeq STARFusion TCGA_RNA-Seq STARD7-HS1BP3 STARD7 chr2 96852955 - HS1BP3 chr2 20824652 - Exonic hg19 GBM TCGA-76-4931-01A 3 2 Out-of-frame Intra-chr q11.2 p24.1 Seq+ 28055 ChimerSeq STARFusion TCGA_RNA-Seq CHD2-LOC100507217 CHD2 chr15 93444529 + LOC100507217 chr15 93428745 + Exonic hg19 GBM TCGA-76-4931-01A 2 0 CDS-5'UTR Intra-chr q26.1 28056 ChimerSeq STARFusion TCGA_RNA-Seq CHI3L1-PTPRZ1 CHI3L1 chr1 203153704 - PTPRZ1 chr7 121668606 + Exonic hg19 GBM TCGA-76-4931-01A 2 0 In-Frame Inter-chr q32.1 q31.32 Seq+ 28057 ChimerSeq STARFusion TCGA_RNA-Seq DR1-FNBP1L DR1 chr1 93819628 + FNBP1L chr1 93965025 + Exonic hg19 GBM TCGA-76-4931-01A 2 0 In-Frame Intra-chr p22.1 Transcription factor p22.1 28058 ChimerSeq STARFusion TCGA_RNA-Seq KRBOX1-FAM198A KRBOX1 chr3 42983563 + FAM198A chr3 43095013 + Exonic hg19 GBM TCGA-76-4931-01A 2 0 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 28059 ChimerSeq STARFusion TCGA_RNA-Seq LINC00478-DPP6 LINC00478 chr21 17859858 + DPP6 chr7 154143299 + Exonic hg19 GBM TCGA-76-4931-01A 2 0 5'UTR-CDS Inter-chr 28060 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-76-4931-01A 2 0 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28061 ChimerSeq STARFusion TCGA_RNA-Seq RPL37A-IGFBP2 RPL37A chr2 217364754 + IGFBP2 chr2 217525280 + Exonic hg19 GBM TCGA-76-4931-01A 2 0 Out-of-frame Intra-chr q35 q35 28062 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D2B-ETFA TBC1D2B chr15 78369635 - ETFA chr15 76588078 - Exonic hg19 GBM TCGA-76-4931-01A 2 0 In-Frame Intra-chr q25.1 q24.3 28063 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-GFAP RNA45S5 chrUn_gl000220 114570 + GFAP chr17 42984332 - Exonic hg19 GBM TCGA-32-4213-01A 3 26 Out-of-frame Inter-chr q21.31 28064 ChimerSeq STARFusion TCGA_RNA-Seq RPL13A-SNORD33 RPL13A chr19 49993963 + SNORD33 chr19 49993876 + Exonic hg19 GBM TCGA-32-4213-01A 4 0 Out-of-frame Intra-chr q13.33 q23.1 28065 ChimerSeq STARFusion TCGA_RNA-Seq RPL13AP5-SNORD33 RPL13AP5 chr19 49993963 + SNORD33 chr19 49993876 + Exonic hg19 GBM TCGA-32-4213-01A 4 0 Out-of-frame Intra-chr q24.1 q23.1 28066 ChimerSeq STARFusion TCGA_RNA-Seq ZNF625-KEAP1 ZNF625 chr19 12267371 - KEAP1 chr19 10610756 - Exonic hg19 GBM TCGA-19-1787-01B 9 3 CDS-5'UTR Intra-chr p13.2 Transcription factor p13.2 Oncogene 28067 ChimerSeq STARFusion TCGA_RNA-Seq ZNF625-S1PR5 ZNF625 chr19 12267371 - S1PR5 chr19 10625705 - Exonic hg19 GBM TCGA-19-1787-01B 6 7 CDS-5'UTR Intra-chr p13.2 Transcription factor p13.2 28068 ChimerSeq STARFusion TCGA_RNA-Seq AGBL3-TMEM140 AGBL3 chr7 134730325 + TMEM140 chr7 134849170 + Exonic hg19 GBM TCGA-19-1787-01B 2 0 CDS-5'UTR Intra-chr q33 q33 28069 ChimerSeq STARFusion TCGA_RNA-Seq SPIN1-NXNL2 SPIN1 chr9 91003453 + NXNL2 chr9 91190002 + Exonic hg19 GBM TCGA-19-1787-01B 2 0 5'UTR-3'UTR Intra-chr q22.1 q22.1 28070 ChimerSeq STARFusion TCGA_RNA-Seq OS9-C12orf66 OS9 chr12 58090156 + C12orf66 chr12 64588438 - Exonic hg19 GBM TCGA-06-0174-01A 803 592 Out-of-frame Intra-chr q13.3 q14.2 Seq+ 28071 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM2-PIP4K2C R3HDM2 chr12 57682792 - PIP4K2C chr12 57989671 + Exonic hg19 GBM TCGA-06-0174-01A 169 150 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 28072 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM2-PIP4K2C R3HDM2 chr12 57689182 - PIP4K2C chr12 57989671 + Exonic hg19 GBM TCGA-06-0174-01A 99 150 In-Frame Intra-chr q13.3 q13.3 Seq+ 28073 ChimerSeq STARFusion TCGA_RNA-Seq OS9-XRCC6BP1 OS9 chr12 58089626 + XRCC6BP1 chr12 58339411 + Exonic hg19 GBM TCGA-06-0174-01A 78 75 In-Frame Intra-chr q13.3 Seq+ 28074 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM2-PIP4K2C R3HDM2 chr12 57686355 - PIP4K2C chr12 57989671 + Exonic hg19 GBM TCGA-06-0174-01A 40 150 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 28075 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM2-PIP4K2C R3HDM2 chr12 57689182 - PIP4K2C chr12 57992848 + Exonic hg19 GBM TCGA-06-0174-01A 23 150 In-Frame Intra-chr q13.3 q13.3 Seq+ 28076 ChimerSeq STARFusion TCGA_RNA-Seq OS9-CPSF6 OS9 chr12 58090156 + CPSF6 chr12 69644909 + Exonic hg19 GBM TCGA-06-0174-01A 35 19 In-Frame Intra-chr q13.3 q15 Seq+ 28077 ChimerSeq STARFusion TCGA_RNA-Seq MEIS2-ZNF143 MEIS2 chr15 37329015 - ZNF143 chr11 9516193 + Exonic hg19 GBM TCGA-06-0174-01A 30 16 In-Frame Inter-chr q14 Transcription factor p15.4 Transcription factor Seq+ 28078 ChimerSeq STARFusion TCGA_RNA-Seq ZNF143-C15orf41 ZNF143 chr11 9501093 + C15orf41 chr15 36936479 + Exonic hg19 GBM TCGA-06-0174-01A 9 2 Out-of-frame Inter-chr p15.4 Transcription factor q14 Seq+ 28079 ChimerSeq STARFusion TCGA_RNA-Seq C15orf41-MEIS2 C15orf41 chr15 36872162 + MEIS2 chr15 37242601 - Exonic hg19 GBM TCGA-06-0174-01A 5 4 Out-of-frame Intra-chr q14 q14 Transcription factor Seq+ 28080 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-06-0174-01A 4 0 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28081 ChimerSeq STARFusion TCGA_RNA-Seq RHOT1-ASIC2 RHOT1 chr17 30469748 + ASIC2 chr17 31439085 - Exonic hg19 GBM TCGA-06-0174-01A 3 1 Out-of-frame Intra-chr q11.2 q12 Seq+ 28082 ChimerSeq STARFusion TCGA_RNA-Seq USP46-SCFD2 USP46 chr4 53494117 - SCFD2 chr4 54140168 - Exonic hg19 GBM TCGA-06-0174-01A 2 1 In-Frame Intra-chr q12 q12 Seq+ 28083 ChimerSeq STARFusion TCGA_RNA-Seq LOC100506844-CTDSP2 LOC100506844 chr12 58329253 - CTDSP2 chr12 58218102 - Exonic hg19 GBM TCGA-06-0174-01A 2 0 3'UTR-CDS Intra-chr q14.1 28084 ChimerSeq STARFusion TCGA_RNA-Seq POLD3-RNF169 POLD3 chr11 74347320 + RNF169 chr11 74500671 + Exonic hg19 GBM TCGA-06-0174-01A 2 0 In-Frame Intra-chr q13.4 q13.4 Seq+ 28085 ChimerSeq STARFusion TCGA_RNA-Seq PTPRD-CDC37L1 PTPRD chr9 8404537 - CDC37L1 chr9 4697096 + Exonic hg19 GBM TCGA-06-0174-01A 2 0 In-Frame Intra-chr Oncogene Tumor suppressor gene p24.1 28086 ChimerSeq STARFusion TCGA_RNA-Seq RASSF8-SSPN RASSF8 chr12 26208379 + SSPN chr12 26377226 + Exonic hg19 GBM TCGA-06-0174-01A 2 0 Out-of-frame Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 28087 ChimerSeq STARFusion TCGA_RNA-Seq RPL37A-IGFBP2 RPL37A chr2 217364754 + IGFBP2 chr2 217525280 + Exonic hg19 GBM TCGA-06-0174-01A 2 0 Out-of-frame Intra-chr q35 q35 28088 ChimerSeq STARFusion TCGA_RNA-Seq TET2-GPM6A TET2 chr4 106068136 + GPM6A chr4 176622918 - Exonic hg19 GBM TCGA-06-0174-01A 2 0 5'UTR-CDS Intra-chr q24 Oncogene Tumor suppressor gene Transcription factor q34.2 28089 ChimerSeq STARFusion TCGA_RNA-Seq TXNDC15-DDX46 TXNDC15 chr5 134210220 + DDX46 chr5 134162637 + Exonic hg19 GBM TCGA-02-0055-01A 2 1 In-Frame Intra-chr q31.1 q31.1 28090 ChimerSeq STARFusion TCGA_RNA-Seq ATF2-WIPF1 ATF2 chr2 176032778 - WIPF1 chr2 175450339 - Exonic hg19 GBM TCGA-02-0055-01A 2 0 5'UTR-5'UTR Intra-chr q31.1 Transcription factor q31.1 28091 ChimerSeq STARFusion TCGA_RNA-Seq DES-VIM DES chr2 220286282 + VIM chr10 17277845 + Exonic hg19 GBM TCGA-02-0055-01A 2 0 In-Frame Inter-chr q35 p13 Tumor suppressor gene 28092 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 GBM TCGA-02-0055-01A 2 0 CDS-5'UTR Intra-chr q23 Seq+ 28093 ChimerSeq STARFusion TCGA_RNA-Seq ZMAT5-ASCC2 ZMAT5 chr22 30162861 - ASCC2 chr22 30186537 - Exonic hg19 GBM TCGA-41-2572-01A 110 32 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 28094 ChimerSeq STARFusion TCGA_RNA-Seq ZMAT5-ASCC2 ZMAT5 chr22 30162938 - ASCC2 chr22 30186537 - Exonic hg19 GBM TCGA-41-2572-01A 97 32 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 28095 ChimerSeq STARFusion TCGA_RNA-Seq SP3-PRCP SP3 chr2 174819601 - PRCP chr11 82564320 - Exonic hg19 GBM TCGA-41-2572-01A 12 1 Out-of-frame Inter-chr q31.1 Transcription factor q14.1 Seq+ 28096 ChimerSeq STARFusion TCGA_RNA-Seq AP1B1-SGSM3 AP1B1 chr22 29734979 - SGSM3 chr22 40796700 + Exonic hg19 GBM TCGA-41-2572-01A 6 6 CDS-5'UTR Intra-chr q12.2 q13.1 Seq+ 28097 ChimerSeq STARFusion TCGA_RNA-Seq FBXL18-WDR83OS FBXL18 chr7 5540119 - WDR83OS chr19 12780047 - Exonic hg19 GBM TCGA-41-2572-01A 6 3 In-Frame Inter-chr p22.1 p13.13 Seq+ 28098 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642595 + MT3 chr16 56623782 + Exonic hg19 GBM TCGA-41-2572-01A 5 5 In-Frame Intra-chr q13 Tumor suppressor gene q13 28099 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-41-2572-01A 5 0 5'UTR-CDS Intra-chr q13 q13 28100 ChimerSeq STARFusion TCGA_RNA-Seq UNC13D-FYN UNC13D chr17 73824038 - FYN chr6 111983150 - Exonic hg19 GBM TCGA-41-2572-01A 4 0 3'UTR-CDS Inter-chr q25.1 q21 TK:Src Seq+ 28101 ChimerSeq STARFusion TCGA_RNA-Seq MT1DP-MT3 MT1DP chr16 56678088 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-41-2572-01A 3 0 5'UTR-CDS Intra-chr q13 Tumor suppressor gene q13 28102 ChimerSeq STARFusion TCGA_RNA-Seq PGAM2-ID3 PGAM2 chr7 44104769 - ID3 chr1 23885731 - Exonic hg19 GBM TCGA-41-2572-01A 3 0 Out-of-frame Inter-chr p13 28103 ChimerSeq STARFusion TCGA_RNA-Seq KIF1B-UBE4B KIF1B chr1 10292492 + UBE4B chr1 10238702 + Exonic hg19 GBM TCGA-16-1045-01B 204 148 Out-of-frame Intra-chr p36.22 Tumor suppressor gene p36.22 Tumor suppressor gene Seq+ 28104 ChimerSeq STARFusion TCGA_RNA-Seq THRA-GSDMA THRA chr17 38233861 + GSDMA chr17 38121936 + Exonic hg19 GBM TCGA-16-1045-01B 85 53 CDS-5'UTR Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Seq+ 28105 ChimerSeq STARFusion TCGA_RNA-Seq THRA-GSDMA THRA chr17 38233191 + GSDMA chr17 38121936 + Exonic hg19 GBM TCGA-16-1045-01B 13 53 CDS-5'UTR Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Seq+ 28106 ChimerSeq STARFusion TCGA_RNA-Seq BAI2-HS3ST4 BAI2 chr1 32221600 - HS3ST4 chr16 26146933 + Exonic hg19 GBM TCGA-16-1045-01B 13 21 Out-of-frame Inter-chr p12.1 Seq+ 28107 ChimerSeq STARFusion TCGA_RNA-Seq EPS15-TRABD2B EPS15 chr1 51984871 - TRABD2B chr1 48267291 - Exonic hg19 GBM TCGA-16-1045-01B 9 2 Out-of-frame Intra-chr p32.3 p33 Seq+ 28108 ChimerSeq STARFusion TCGA_RNA-Seq BAI2-HS3ST4 BAI2 chr1 32229485 - HS3ST4 chr16 26146933 + Exonic hg19 GBM TCGA-16-1045-01B 3 21 5'UTR-CDS Inter-chr p12.1 Seq+ 28109 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-16-1045-01B 3 1 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28110 ChimerSeq STARFusion TCGA_RNA-Seq CENPP-PSMD14 CENPP chr9 95142141 + PSMD14 chr2 162265348 + Exonic hg19 GBM TCGA-16-1045-01B 2 0 In-Frame Inter-chr q22.31 q24.2 28111 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC11-CAMTA1 DNAJC11 chr1 6761789 - CAMTA1 chr1 6880241 + Exonic hg19 GBM TCGA-16-1045-01B 2 0 In-Frame Intra-chr p36.31 Tumor suppressor gene p36.31 Tumor suppressor gene Transcription factor 28112 ChimerSeq STARFusion TCGA_RNA-Seq SNX2-PICALM SNX2 chr5 122110906 + PICALM chr11 85742653 - Exonic hg19 GBM TCGA-16-1045-01B 2 0 Out-of-frame Inter-chr q23.2 q14.2 28113 ChimerSeq STARFusion TCGA_RNA-Seq TUBGCP2-EFHD1 TUBGCP2 chr10 135116296 - EFHD1 chr2 233527512 + Exonic hg19 GBM TCGA-16-1045-01B 2 0 Out-of-frame Inter-chr q26.3 q37.1 28114 ChimerSeq STARFusion TCGA_RNA-Seq RBFOX2-LGALS2 RBFOX2 chr22 36424288 - LGALS2 chr22 37967938 - Exonic hg19 GBM TCGA-19-2625-01A 28 28 In-Frame Intra-chr q13.1 Seq+ 28115 ChimerSeq STARFusion TCGA_RNA-Seq MYO18B-UBE2R2 MYO18B chr22 26228964 + UBE2R2 chr9 33911962 + Exonic hg19 GBM TCGA-19-2625-01A 22 15 Out-of-frame Inter-chr q12.1 Tumor suppressor gene p13.3 Seq+ 28116 ChimerSeq STARFusion TCGA_RNA-Seq UBAP2-NCF4 UBAP2 chr9 33986758 - NCF4 chr22 37271695 + Exonic hg19 GBM TCGA-19-2625-01A 13 6 Out-of-frame Inter-chr p13.3 Seq+ 28117 ChimerSeq STARFusion TCGA_RNA-Seq RBFOX2-LGALS2 RBFOX2 chr22 36424288 - LGALS2 chr22 37966742 - Exonic hg19 GBM TCGA-19-2625-01A 6 28 Out-of-frame Intra-chr q13.1 Seq+ 28118 ChimerSeq STARFusion TCGA_RNA-Seq RBFOX2-LGALS2 RBFOX2 chr22 36423100 - LGALS2 chr22 37967938 - Exonic hg19 GBM TCGA-19-2625-01A 3 28 5'UTR-CDS Intra-chr q13.1 Seq+ 28119 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF3-CDC42EP1 ZNRF3 chr22 29280054 + CDC42EP1 chr22 37962079 + Exonic hg19 GBM TCGA-19-2625-01A 9 1 CDS-5'UTR Intra-chr q12.1 q13.1 Seq+ 28120 ChimerSeq STARFusion TCGA_RNA-Seq PIGO-CA9 PIGO chr9 35096558 - CA9 chr9 35679851 + Exonic hg19 GBM TCGA-19-2625-01A 9 0 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 28121 ChimerSeq STARFusion TCGA_RNA-Seq CRB2-RECK CRB2 chr9 126140660 + RECK chr9 36102096 + Exonic hg19 GBM TCGA-19-2625-01A 7 3 Out-of-frame Intra-chr q33.3 p13.3 Tumor suppressor gene Seq+ 28122 ChimerSeq STARFusion TCGA_RNA-Seq RECK-MYO18B RECK chr9 36052320 + MYO18B chr22 26399231 + Exonic hg19 GBM TCGA-19-2625-01A 6 2 Out-of-frame Inter-chr p13.3 Tumor suppressor gene q12.1 Tumor suppressor gene Seq+ 28123 ChimerSeq STARFusion TCGA_RNA-Seq CCDC107-PITPNB CCDC107 chr9 35660644 + PITPNB chr22 28310335 - Exonic hg19 GBM TCGA-19-2625-01A 6 1 In-Frame Inter-chr p13.3 q12.1 28124 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-19-2625-01A 3 7 In-Frame Intra-chr q13 Tumor suppressor gene q13 28125 ChimerSeq STARFusion TCGA_RNA-Seq DRG1-MYH9 DRG1 chr22 31823168 + MYH9 chr22 36723533 - Exonic hg19 GBM TCGA-19-2625-01A 4 2 Out-of-frame Intra-chr q12.2 Tumor suppressor gene q12.3 Oncogene Tumor suppressor gene Seq+ 28126 ChimerSeq STARFusion TCGA_RNA-Seq C5orf63-MARCH3 C5orf63 chr5 126383134 - 2019_ 3_ 3_ chr5 126253919 - Exonic hg19 GBM TCGA-19-2625-01A 3 1 Out-of-frame Intra-chr q23.2 q23.2 28127 ChimerSeq STARFusion TCGA_RNA-Seq NSD1-NFATC2 NSD1 chr5 176675325 + NFATC2 chr20 50092197 - Exonic hg19 GBM TCGA-19-2625-01A 3 1 In-Frame Inter-chr q35.3 Oncogene q13.2 Tumor suppressor gene Transcription factor 28128 ChimerSeq STARFusion TCGA_RNA-Seq LOC100130075-SZRD1 LOC100130075 chr12 69198614 - SZRD1 chr1 16721764 + Exonic hg19 GBM TCGA-19-2625-01A 3 0 Out-of-frame Inter-chr p36.13 28129 ChimerSeq STARFusion TCGA_RNA-Seq PDXP-MYO18B PDXP chr22 38055363 + MYO18B chr22 26159198 + Exonic hg19 GBM TCGA-19-2625-01A 2 2 Out-of-frame Intra-chr q13.1 q12.1 Tumor suppressor gene 28130 ChimerSeq STARFusion TCGA_RNA-Seq LRRFIP2-DCAF7 LRRFIP2 chr3 37125127 - DCAF7 chr17 61655831 + Exonic hg19 GBM TCGA-19-2625-01A 2 0 In-Frame Inter-chr p22.2 q23.3 28131 ChimerSeq STARFusion TCGA_RNA-Seq MYOF-LUC7L3 MYOF chr10 95132687 - LUC7L3 chr17 48829561 + Exonic hg19 GBM TCGA-19-2625-01A 2 0 CDS-3'UTR Inter-chr q23.33 q21.33 28132 ChimerSeq STARFusion TCGA_RNA-Seq STK4-PI3 STK4 chr20 43653771 + PI3 chr20 43804502 + Exonic hg19 GBM TCGA-19-2625-01A 2 0 Out-of-frame Intra-chr q13.12 q13.12 28133 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 GBM TCGA-76-4927-01A 2 0 CDS-5'UTR Intra-chr q23 Seq+ 28134 ChimerSeq STARFusion TCGA_RNA-Seq ARID1A-RNF31 ARID1A chr1 27094490 + RNF31 chr14 24624366 + Exonic hg19 GBM TCGA-06-0125-01A 50 20 In-Frame Inter-chr p36.11 Oncogene Tumor suppressor gene q12 Seq+ 28135 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A3-SGTA SLC39A3 chr19 2737046 - SGTA chr19 2765283 - Exonic hg19 GBM TCGA-06-0125-01A 30 14 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 28136 ChimerSeq STARFusion TCGA_RNA-Seq FDX1-SLC35E2 FDX1 chr11 110327771 + SLC35E2 chr1 1666274 - Exonic hg19 GBM TCGA-06-0125-01A 12 2 Out-of-frame Inter-chr q22.3 p36.33 Seq+ 28137 ChimerSeq STARFusion TCGA_RNA-Seq COX14-SPATS2 COX14 chr12 50506084 + SPATS2 chr12 49854553 + Exonic hg19 GBM TCGA-06-0125-01A 4 10 5'UTR-5'UTR Intra-chr q13.12 q13.12 Seq+ 28138 ChimerSeq STARFusion TCGA_RNA-Seq C1orf194-UQCR10 C1orf194 chr1 109650635 - UQCR10 chr22 30163372 + Exonic hg19 GBM TCGA-06-0125-01A 3 1 Out-of-frame Inter-chr p13.3 q12.2 KB 28139 ChimerSeq STARFusion TCGA_RNA-Seq FAM220A-CYTH3 FAM220A chr7 6388204 - CYTH3 chr7 6230162 - Exonic hg19 GBM TCGA-06-0125-01A 2 0 5'UTR-CDS Intra-chr p22.1 p22.1 28140 ChimerSeq STARFusion TCGA_RNA-Seq PTN-LOC349160 PTN chr7 136935977 - LOC349160 chr7 136717660 - Exonic hg19 GBM TCGA-06-0125-01A 2 0 CDS-3'UTR Intra-chr q33 28141 ChimerSeq STARFusion TCGA_RNA-Seq PPM1H-RAP1B PPM1H chr12 63182006 - RAP1B chr12 69042479 + Exonic hg19 GBM TCGA-19-2624-01A 474 211 CDS-5'UTR Intra-chr q14.2 q15 Seq+ 28142 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-NUP107 TSFM chr12 58186856 + NUP107 chr12 69103018 + Exonic hg19 GBM TCGA-19-2624-01A 151 116 Out-of-frame Intra-chr q14.1 q15 Seq+ 28143 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-PPM1H EGFR chr7 55087058 + PPM1H chr12 63195940 - Exonic hg19 GBM TCGA-19-2624-01A 131 83 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q14.2 Seq+ 28144 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-EGFR MDM2 chr12 69203072 + EGFR chr7 55231426 + Exonic hg19 GBM TCGA-19-2624-01A 55 62 Out-of-frame Inter-chr q15 Oncogene p11.2 TK:EGFR Oncogene Seq+ 28145 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-GNS EGFR chr7 55240817 + GNS chr12 65110599 - Exonic hg19 GBM TCGA-19-2624-01A 54 43 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q14.3 Seq+ 28146 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-NUP107 TSFM chr12 58180945 + NUP107 chr12 69103018 + Exonic hg19 GBM TCGA-19-2624-01A 28 116 In-Frame Intra-chr q14.1 q15 Seq+ 28147 ChimerSeq STARFusion TCGA_RNA-Seq HOXC10-WIBG HOXC10 chr12 54379794 + WIBG chr12 56297264 - Exonic hg19 GBM TCGA-19-2624-01A 14 8 In-Frame Intra-chr q13.13 Transcription factor 12q13.2 Seq+ 28148 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D30-METTL21B TBC1D30 chr12 65260683 + METTL21B chr12 58176211 + Exonic hg19 GBM TCGA-19-2624-01A 10 1 CDS-3'UTR Intra-chr q14.3 28149 ChimerSeq STARFusion TCGA_RNA-Seq FKBP9-LANCL2 FKBP9 chr7 33039872 + LANCL2 chr7 55466116 + Exonic hg19 GBM TCGA-19-2624-01A 5 6 In-Frame Intra-chr p14.3 p11.2 28150 ChimerSeq STARFusion TCGA_RNA-Seq METTL21B-CYP27B1 METTL21B chr12 58166911 + CYP27B1 chr12 58159980 - Exonic hg19 GBM TCGA-19-2624-01A 4 2 Out-of-frame Intra-chr q14.1 28151 ChimerSeq STARFusion TCGA_RNA-Seq FKBP9L-LANCL2 FKBP9L chr7 55755472 - LANCL2 chr7 55466116 + Exonic hg19 GBM TCGA-19-2624-01A 2 5 3'UTR-CDS Intra-chr p11.2 28152 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-AUTS2 CPSF6 chr12 69656342 + AUTS2 chr7 70257043 + Exonic hg19 GBM TCGA-19-2624-01A 3 0 3'UTR-3'UTR Inter-chr q15 q11.22 28153 ChimerSeq STARFusion TCGA_RNA-Seq LMO1-RIC3 LMO1 chr11 8289974 - RIC3 chr11 8174970 - Exonic hg19 GBM TCGA-19-2624-01A 2 1 5'UTR-3'UTR Intra-chr p15.4 p15.4 Seq+ 28154 ChimerSeq STARFusion TCGA_RNA-Seq DIRAS2-LOC340515 DIRAS2 chr9 93405034 - LOC340515 chr9 93271223 - Exonic hg19 GBM TCGA-19-2624-01A 2 0 5'UTR-3'UTR Intra-chr q22.2 28155 ChimerSeq STARFusion TCGA_RNA-Seq FBXL7-CHCHD3 FBXL7 chr5 15616181 + CHCHD3 chr7 132570505 - Exonic hg19 GBM TCGA-19-2624-01A 2 0 Out-of-frame Inter-chr p15.1 q33 Transcription factor 28156 ChimerSeq STARFusion TCGA_RNA-Seq SLC35E3-OS9 SLC35E3 chr12 69140559 + OS9 chr12 58109543 + Exonic hg19 GBM TCGA-19-2624-01A 2 0 In-Frame Intra-chr q15 q13.3 Seq+ 28157 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 GBM TCGA-19-2624-01A 2 0 CDS-5'UTR Intra-chr q23 Seq+ 28158 ChimerSeq STARFusion TCGA_RNA-Seq TBCK-DENND5B TBCK chr4 107016639 - DENND5B chr12 31595859 - Exonic hg19 GBM TCGA-19-2624-01A 2 0 Out-of-frame Inter-chr q24 Other:TBCK p11.21 28159 ChimerSeq STARFusion TCGA_RNA-Seq TTLL5-IFT43 TTLL5 chr14 76368567 + IFT43 chr14 76488670 + Exonic hg19 GBM TCGA-19-2624-01A 2 0 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 28160 ChimerSeq STARFusion TCGA_RNA-Seq SNRNP200-CIAO1 SNRNP200 chr2 96948939 - CIAO1 chr2 96935006 + Exonic hg19 GBM TCGA-14-0871-01A 4 4 In-Frame Intra-chr q11.2 q11.2 28161 ChimerSeq STARFusion TCGA_RNA-Seq GDI1-TBC1D8 GDI1 chrX 153667210 + TBC1D8 chr2 101644815 - Exonic hg19 GBM TCGA-14-0871-01A 4 0 Out-of-frame Inter-chr q28 q11.2 Seq+ 28162 ChimerSeq STARFusion TCGA_RNA-Seq EBF3-FAM35BP EBF3 chr10 131755522 - FAM35BP chr10 46918169 + Exonic hg19 GBM TCGA-14-0871-01A 3 0 Out-of-frame Intra-chr q26.3 Tumor suppressor gene Transcription factor q11.22 28163 ChimerSeq STARFusion TCGA_RNA-Seq RGPD5-GPR39 RGPD5 chr2 113152195 - GPR39 chr2 133402674 + Exonic hg19 GBM TCGA-14-0871-01A 3 0 3'UTR-CDS Intra-chr q13 q21.2 28164 ChimerSeq STARFusion TCGA_RNA-Seq RGPD8-GPR39 RGPD8 chr2 113152195 - GPR39 chr2 133402674 + Exonic hg19 GBM TCGA-14-0871-01A 3 0 In-Frame Intra-chr q14.1 q21.2 28165 ChimerSeq STARFusion TCGA_RNA-Seq STX3-ATG13 STX3 chr11 59558059 + ATG13 chr11 46666889 + Exonic hg19 GBM TCGA-14-0871-01A 3 0 In-Frame Intra-chr q12.1 p11.2 28166 ChimerSeq STARFusion TCGA_RNA-Seq BNC2-C9orf92 BNC2 chr9 16435553 - C9orf92 chr9 16215897 - Exonic hg19 GBM TCGA-14-0871-01A 2 0 Out-of-frame Intra-chr p22.2 Transcription factor p22.3 28167 ChimerSeq STARFusion TCGA_RNA-Seq NDST3-ZNF483 NDST3 chr4 119064839 + ZNF483 chr9 114338645 + Exonic hg19 GBM TCGA-14-0871-01A 2 0 Out-of-frame Inter-chr q26 q31.3 Transcription factor Seq+ 28168 ChimerSeq STARFusion TCGA_RNA-Seq PXDN-TRIP12 PXDN chr2 1651944 - TRIP12 chr2 230638977 - Exonic hg19 GBM TCGA-06-0882-01A 10 0 Out-of-frame Intra-chr p25.3 q36.3 Seq+ 28169 ChimerSeq STARFusion TCGA_RNA-Seq TRIP12-CPS1 TRIP12 chr2 230650473 - CPS1 chr2 211421443 + Exonic hg19 GBM TCGA-06-0882-01A 8 2 In-Frame Intra-chr q36.3 q34 Seq+ 28170 ChimerSeq STARFusion TCGA_RNA-Seq SRGAP3-CEPT1 SRGAP3 chr3 9290569 - CEPT1 chr1 111717501 + Exonic hg19 GBM TCGA-06-0882-01A 3 3 Out-of-frame Inter-chr p25.3 Tumor suppressor gene p13.3 Seq+ 28171 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-06-0882-01A 3 1 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28172 ChimerSeq STARFusion TCGA_RNA-Seq SCARB1-SFSWAP SCARB1 chr12 125348141 - SFSWAP chr12 132209950 + Exonic hg19 GBM TCGA-06-0882-01A 3 1 In-Frame Intra-chr q24.31 q24.33 Seq+ 28173 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6A-PRKCB TNRC6A chr16 24741621 + PRKCB chr16 24192111 + Exonic hg19 GBM TCGA-06-0882-01A 2 3 In-Frame Intra-chr p12.1 p12.2 Tumor suppressor gene Seq+ 28174 ChimerSeq STARFusion TCGA_RNA-Seq FBRSL1-SFSWAP FBRSL1 chr12 133067447 + SFSWAP chr12 132262610 + Exonic hg19 GBM TCGA-06-0882-01A 2 1 In-Frame Intra-chr q24.33 q24.33 Seq+ 28175 ChimerSeq STARFusion TCGA_RNA-Seq ACYP2-RTN4 ACYP2 chr2 54342893 + RTN4 chr2 55214834 - Exonic hg19 GBM TCGA-06-0882-01A 2 0 In-Frame Intra-chr p16.2 p16.1 Tumor suppressor gene 28176 ChimerSeq STARFusion TCGA_RNA-Seq CHST15-CPXM2 CHST15 chr10 125771849 - CPXM2 chr10 125639825 - Exonic hg19 GBM TCGA-06-0882-01A 2 0 In-Frame Intra-chr q26.13 q26.13 28177 ChimerSeq STARFusion TCGA_RNA-Seq CLCN5-CTNND2 CLCN5 chrX 49689924 + CTNND2 chr5 11082958 - Exonic hg19 GBM TCGA-06-0882-01A 2 0 Out-of-frame Inter-chr p11.23 p15.2 28178 ChimerSeq STARFusion TCGA_RNA-Seq FAM69C-CYB5A FAM69C chr18 72113841 - CYB5A chr18 71930712 - Exonic hg19 GBM TCGA-06-0882-01A 2 0 In-Frame Intra-chr q22.3 q22.3 Tumor suppressor gene 28179 ChimerSeq STARFusion TCGA_RNA-Seq MRPL27-EFCAB3 MRPL27 chr17 48447393 - EFCAB3 chr17 60455329 + Exonic hg19 GBM TCGA-06-0882-01A 2 0 Out-of-frame Intra-chr q21.33 q23.2 Seq+ 28180 ChimerSeq STARFusion TCGA_RNA-Seq SMARCA4-CARM1 SMARCA4 chr19 11071850 + CARM1 chr19 11015627 + Exonic hg19 GBM TCGA-28-5220-01A 5 5 5'UTR-CDS Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 28181 ChimerSeq STARFusion TCGA_RNA-Seq SDK2-RAB37 SDK2 chr17 71375316 - RAB37 chr17 72725395 + Exonic hg19 GBM TCGA-28-5220-01A 3 1 In-Frame Intra-chr q25.1 q25.1 28182 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT3-SREBF2 AGPAT3 chr21 45391371 + SREBF2 chr22 42276720 + Exonic hg19 GBM TCGA-28-5220-01A 2 0 Out-of-frame Inter-chr q22.3 q13.2 Transcription factor 28183 ChimerSeq STARFusion TCGA_RNA-Seq ELP4-EED ELP4 chr11 31671769 + EED chr11 85988022 + Exonic hg19 GBM TCGA-28-5220-01A 2 0 In-Frame Intra-chr p13 q14.2 Tumor suppressor gene 28184 ChimerSeq STARFusion TCGA_RNA-Seq ADAM17-NHEJ1 ADAM17 chr2 9633876 - NHEJ1 chr2 220023084 - Exonic hg19 GBM TCGA-19-2629-01A 46 24 CDS-5'UTR Intra-chr p25.1 q35 Seq+ 28185 ChimerSeq STARFusion TCGA_RNA-Seq TCHH-GFAP TCHH chr1 152084650 - GFAP chr17 42988823 - Exonic hg19 GBM TCGA-19-2629-01A 13 0 Out-of-frame Inter-chr q21.3 q21.31 28186 ChimerSeq STARFusion TCGA_RNA-Seq EVA1C-RCAN1 EVA1C chr21 33785321 + RCAN1 chr21 35896008 - Exonic hg19 GBM TCGA-19-2629-01A 4 2 Out-of-frame Intra-chr q22.11 q22.12 28187 ChimerSeq STARFusion TCGA_RNA-Seq LOC100507266-MSX1 LOC100507266 chr4 4651269 + MSX1 chr4 4864428 + Exonic hg19 GBM TCGA-19-2629-01A 3 3 5'UTR-CDS Intra-chr p16.2 Transcription factor 28188 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-19-2629-01A 3 1 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28189 ChimerSeq STARFusion TCGA_RNA-Seq MT1B-MT3 MT1B chr16 56686548 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-19-2629-01A 2 0 In-Frame Intra-chr q13 q13 28190 ChimerSeq STARFusion TCGA_RNA-Seq NDUFA8-TTLL11 NDUFA8 chr9 124910391 - TTLL11 chr9 124801647 - Exonic hg19 GBM TCGA-19-2629-01A 2 0 In-Frame Intra-chr q33.2 q33.2 28191 ChimerSeq STARFusion TCGA_RNA-Seq OPCML-NTM OPCML chr11 133402159 - NTM chr11 131781458 + Exonic hg19 GBM TCGA-06-0646-01A 3 1 In-Frame Intra-chr q25 Tumor suppressor gene q25 Seq+ 28192 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 GBM TCGA-06-0646-01A 2 1 CDS-5'UTR Intra-chr q23 Seq+ 28193 ChimerSeq STARFusion TCGA_RNA-Seq DPF3-RGL2 DPF3 chr14 73140948 - RGL2 chr6_mcf_hap5 4734065 - Exonic hg19 GBM TCGA-06-0646-01A 2 0 CDS-3'UTR Inter-chr q24.2 Transcription factor 28194 ChimerSeq STARFusion TCGA_RNA-Seq KRBOX1-FAM198A KRBOX1 chr3 42983563 + FAM198A chr3 43095013 + Exonic hg19 GBM TCGA-06-0646-01A 2 0 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 28195 ChimerSeq STARFusion TCGA_RNA-Seq SPRED2-G2E3 SPRED2 chr2 65659096 - G2E3 chr14 31050282 + Exonic hg19 GBM TCGA-28-2514-01A 33 9 CDS-5'UTR Inter-chr p14 q12 Seq+ 28196 ChimerSeq STARFusion TCGA_RNA-Seq ARID1A-BEND5 ARID1A chr1 27024031 + BEND5 chr1 49202124 - Exonic hg19 GBM TCGA-28-2514-01A 25 9 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p33 Seq+ 28197 ChimerSeq STARFusion TCGA_RNA-Seq CSMD2-TMEM222 CSMD2 chr1 34312485 - TMEM222 chr1 27657211 + Exonic hg19 GBM TCGA-28-2514-01A 14 10 Out-of-frame Intra-chr p35.1 p36.11 Seq+ 28198 ChimerSeq STARFusion TCGA_RNA-Seq ARID1A-BEND5 ARID1A chr1 27022592 + BEND5 chr1 49202123 - Exonic hg19 GBM TCGA-28-2514-01A 12 9 Out-of-frame Intra-chr p36.11 Oncogene Tumor suppressor gene p33 Seq+ 28199 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-VOPP1 EGFR chr7 55268106 + VOPP1 chr7 55588823 - Exonic hg19 GBM TCGA-28-2514-01A 10 2 In-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 28200 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-28-2514-01A 2 12 In-Frame Intra-chr q13 Tumor suppressor gene q13 28201 ChimerSeq STARFusion TCGA_RNA-Seq SNX6-CD8B SNX6 chr14 35062251 - CD8B chr2 87085539 - Exonic hg19 GBM TCGA-28-2514-01A 5 0 In-Frame Inter-chr q13.1 p11.2 Seq+ 28202 ChimerSeq STARFusion TCGA_RNA-Seq SYF2-AGBL4 SYF2 chr1 25551493 - AGBL4 chr1 50317190 - Exonic hg19 GBM TCGA-28-2514-01A 4 1 Out-of-frame Intra-chr p36.11 p33 28203 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 GBM TCGA-28-2514-01A 3 2 CDS-5'UTR Intra-chr q23 Seq+ 28204 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-28-2514-01A 3 1 5'UTR-CDS Intra-chr q13 q13 28205 ChimerSeq STARFusion TCGA_RNA-Seq LMO1-RIC3 LMO1 chr11 8289974 - RIC3 chr11 8161740 - Exonic hg19 GBM TCGA-28-2514-01A 2 1 5'UTR-CDS Intra-chr p15.4 p15.4 Seq+ 28206 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 GBM TCGA-28-2514-01A 2 1 CDS-5'UTR Intra-chr p12 p12 Transcription factor 28207 ChimerSeq STARFusion TCGA_RNA-Seq LASP1-MSL1 LASP1 chr17 37046757 + MSL1 chr17 38289295 + Exonic hg19 GBM TCGA-28-2514-01A 2 0 In-Frame Intra-chr q12 q21.1 28208 ChimerSeq STARFusion TCGA_RNA-Seq LOC100130691-NFE2L2 LOC100130691 chr2 178203326 - NFE2L2 chr2 178098999 - Exonic hg19 GBM TCGA-28-2514-01A 2 0 3'UTR-CDS Intra-chr q31.2 Oncogene Transcription factor 28209 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R2B-DPYSL3 PPP2R2B chr5 146257565 - DPYSL3 chr5 146804526 - Exonic hg19 GBM TCGA-28-2514-01A 2 0 Out-of-frame Intra-chr q32 q32 Seq+ 28210 ChimerSeq STARFusion TCGA_RNA-Seq AGAP2-TMEM67 AGAP2 chr12 58123422 - TMEM67 chr8 94827533 + Exonic hg19 GBM TCGA-06-0178-01A 59 81 In-Frame Inter-chr q14.1 q22.1 Seq+ 28211 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM2-SORBS2 R3HDM2 chr12 57704047 - SORBS2 chr4 186696520 - Exonic hg19 GBM TCGA-06-0178-01A 8 4 CDS-5'UTR Inter-chr q13.3 q35.1 Seq+ 28212 ChimerSeq STARFusion TCGA_RNA-Seq SORBS2-OS9 SORBS2 chr4 186578578 - OS9 chr12 58109543 + Exonic hg19 GBM TCGA-06-0178-01A 5 4 In-Frame Inter-chr q35.1 q13.3 Seq+ 28213 ChimerSeq STARFusion TCGA_RNA-Seq ARID2-LETMD1 ARID2 chr12 46125097 + LETMD1 chr12 51450133 + Exonic hg19 GBM TCGA-06-0178-01A 3 0 Out-of-frame Intra-chr q12 Oncogene Tumor suppressor gene Transcription factor q13.12 Seq+ 28214 ChimerSeq STARFusion TCGA_RNA-Seq GAK-TMEM175 GAK chr4 925831 - TMEM175 chr4 941497 + Exonic hg19 GBM TCGA-06-0178-01A 3 0 CDS-5'UTR Intra-chr p16.3 Other:NAK p16.3 28215 ChimerSeq STARFusion TCGA_RNA-Seq CNOT1-NDRG4 CNOT1 chr16 58663632 - NDRG4 chr16 58521660 + Exonic hg19 GBM TCGA-06-0178-01A 2 1 5'UTR-5'UTR Intra-chr q21 q21 Tumor suppressor gene Seq+ 28216 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-06-0178-01A 2 1 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28217 ChimerSeq STARFusion TCGA_RNA-Seq TRMU-UPK3A TRMU chr22 46733841 + UPK3A chr22 45689062 + Exonic hg19 GBM TCGA-06-0178-01A 2 1 Out-of-frame Intra-chr q13.31 q13.31 28218 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-SLC16A7 CTDSP2 chr12 58240155 - SLC16A7 chr12 60048933 + Exonic hg19 GBM TCGA-06-0178-01A 2 0 CDS-5'UTR Intra-chr q14.1 q14.1 28219 ChimerSeq STARFusion TCGA_RNA-Seq PDE4DIP-ELMOD2 PDE4DIP chr1 144994591 - ELMOD2 chr4 141456887 + Exonic hg19 GBM TCGA-06-0178-01A 2 0 In-Frame Inter-chr q21.2 Oncogene q31.1 28220 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R12C-PSD PPP1R12C chr19 55610152 - PSD chr10 104167023 - Exonic hg19 GBM TCGA-06-0178-01A 2 0 In-Frame Inter-chr q13.42 q24.32 28221 ChimerSeq STARFusion TCGA_RNA-Seq LANCL2-SEPT14 LANCL2 chr7 55479782 + SEPT14 chr7 55886916 - Exonic hg19 GBM TCGA-06-0211-01A 615 344 In-Frame Intra-chr p11.2 p11.2 Seq+ 28222 ChimerSeq STARFusion TCGA_RNA-Seq SEC61G-EGFR SEC61G chr7 54825188 - EGFR chr7 55224226 + Exonic hg19 GBM TCGA-06-0211-01A 25 20 In-Frame Intra-chr p11.2 p11.2 TK:EGFR Oncogene Seq+ 28223 ChimerSeq STARFusion TCGA_RNA-Seq CRTC1-KLHL26 CRTC1 chr19 18794638 + KLHL26 chr19 18775071 + Exonic hg19 GBM TCGA-06-0211-01A 11 11 Out-of-frame Intra-chr p13.11 Oncogene p13.11 Seq+ 28224 ChimerSeq STARFusion TCGA_RNA-Seq TCHH-GFAP TCHH chr1 152084650 - GFAP chr17 42988823 - Exonic hg19 GBM TCGA-06-0211-01A 7 0 Out-of-frame Inter-chr q21.3 q21.31 28225 ChimerSeq STARFusion TCGA_RNA-Seq SHB-LINGO2 SHB chr9 38016008 - LINGO2 chr9 27950704 - Exonic hg19 GBM TCGA-06-0211-01A 4 1 CDS-5'UTR Intra-chr p13.1 p21.1 Seq+ 28226 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55087058 + SEPT14 chr7 55886916 - Exonic hg19 GBM TCGA-06-0211-01A 2 1 Out-of-frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 28227 ChimerSeq STARFusion TCGA_RNA-Seq AKT3-CEP170 AKT3 chr1 244006427 - CEP170 chr1 243336148 - Exonic hg19 GBM TCGA-06-0211-01A 2 0 Out-of-frame Intra-chr AGC:Akt Oncogene 28228 ChimerSeq STARFusion TCGA_RNA-Seq HRH1-ATG7 HRH1 chr3 11196240 + ATG7 chr3 11340160 + Exonic hg19 GBM TCGA-06-0211-01A 2 0 5'UTR-5'UTR Intra-chr p25.3 p25.3 Seq+ 28229 ChimerSeq STARFusion TCGA_RNA-Seq DCTD-ECE2 DCTD chr4 183836076 - ECE2 chr3 184001573 + Exonic hg19 GBM TCGA-06-0644-01A 29 17 Out-of-frame Inter-chr q35.1 q27.1 Seq+ 28230 ChimerSeq STARFusion TCGA_RNA-Seq CHD2-LOC100507217 CHD2 chr15 93444529 + LOC100507217 chr15 93428745 + Exonic hg19 GBM TCGA-06-0644-01A 14 7 CDS-5'UTR Intra-chr q26.1 28231 ChimerSeq STARFusion TCGA_RNA-Seq MT1X-MT2A MT1X chr16 56717928 + MT2A chr16 56642951 + Exonic hg19 GBM TCGA-06-0644-01A 3 1 Out-of-frame Intra-chr q13 q13 Tumor suppressor gene 28232 ChimerSeq STARFusion TCGA_RNA-Seq METTL14-PRMT1 METTL14 chr4 119631336 + PRMT1 chr19 50187187 + Exonic hg19 GBM TCGA-06-0644-01A 3 0 Out-of-frame Inter-chr q26 q13.33 28233 ChimerSeq STARFusion TCGA_RNA-Seq IP6K2-UBB IP6K2 chr3 48752822 - UBB chr17 16285216 + Exonic hg19 GBM TCGA-06-0644-01A 2 0 CDS-5'UTR Inter-chr p21.31 p11.2 28234 ChimerSeq STARFusion TCGA_RNA-Seq VIM-DES VIM chr10 17275681 + DES chr2 220285217 + Exonic hg19 GBM TCGA-06-0644-01A 2 0 In-Frame Inter-chr p13 Tumor suppressor gene q35 28235 ChimerSeq STARFusion TCGA_RNA-Seq ASTN2-ARHGDIG ASTN2 chr9 119976637 - ARHGDIG chr16 332025 + Exonic hg19 GBM TCGA-02-2483-01A 43 32 In-Frame Inter-chr q33.1 p13.3 Seq+ 28236 ChimerSeq STARFusion TCGA_RNA-Seq LHPP-FANK1 LHPP chr10 126205840 + FANK1 chr10 127668730 + Exonic hg19 GBM TCGA-02-2483-01A 31 21 Out-of-frame Intra-chr q26.13 q26.2 Seq+ 28237 ChimerSeq STARFusion TCGA_RNA-Seq ASTN2-ARHGDIG ASTN2 chr9 119976637 - ARHGDIG chr16 331746 + Exonic hg19 GBM TCGA-02-2483-01A 19 32 In-Frame Inter-chr q33.1 p13.3 Seq+ 28238 ChimerSeq STARFusion TCGA_RNA-Seq LHPP-FANK1 LHPP chr10 126205840 + FANK1 chr10 127677120 + Exonic hg19 GBM TCGA-02-2483-01A 7 21 In-Frame Intra-chr q26.13 q26.2 Seq+ 28239 ChimerSeq STARFusion TCGA_RNA-Seq LHPP-FANK1 LHPP chr10 126186697 + FANK1 chr10 127668730 + Exonic hg19 GBM TCGA-02-2483-01A 4 21 Out-of-frame Intra-chr q26.13 q26.2 Seq+ 28240 ChimerSeq STARFusion TCGA_RNA-Seq ARMC1-WARS ARMC1 chr8 66546233 - WARS chr14 100801373 - Exonic hg19 GBM TCGA-02-2483-01A 5 1 5'UTR-CDS Inter-chr q13.1 q32.2 28241 ChimerSeq STARFusion TCGA_RNA-Seq CSNK2A1-SMARCA2 CSNK2A1 chr20 524316 - SMARCA2 chr9 2028987 + Exonic hg19 GBM TCGA-02-2483-01A 4 2 5'UTR-5'UTR Inter-chr p13 Oncogene p24.3 Tumor suppressor gene Seq+ 28242 ChimerSeq STARFusion TCGA_RNA-Seq KIFAP3-IGSF21 KIFAP3 chr1 169985603 - IGSF21 chr1 18554392 + Exonic hg19 GBM TCGA-02-2483-01A 3 0 In-Frame Intra-chr q24.2 p36.13 28243 ChimerSeq STARFusion TCGA_RNA-Seq NOVA1-CHMP1A NOVA1 chr14 26941526 - CHMP1A chr16 89713739 - Exonic hg19 GBM TCGA-02-2483-01A 2 2 In-Frame Inter-chr q12 q24.3 28244 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140770834 + ACPL2 chr3 140978965 + Exonic hg19 GBM TCGA-02-2483-01A 2 2 5'UTR-5'UTR Intra-chr q23 Seq+ 28245 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-P2RY8 ASMTL chrY 1503915 - P2RY8 chrY 1535475 - Exonic hg19 GBM TCGA-02-2483-01A 2 0 CDS-5'UTR Intra-chr p22.33 p22.33 Seq+ 28246 ChimerSeq STARFusion TCGA_RNA-Seq CCAR1-BLMH CCAR1 chr10 70517134 + BLMH chr17 28614965 - Exonic hg19 GBM TCGA-02-2483-01A 2 0 In-Frame Inter-chr q21.3 Tumor suppressor gene q11.2 28247 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-PVT1 CPSF6 chr12 69656342 + PVT1 chr8 129113226 + Exonic hg19 GBM TCGA-02-2483-01A 2 0 3'UTR-5'UTR Inter-chr q15 q24.21 28248 ChimerSeq STARFusion TCGA_RNA-Seq FANK1-STOX1 FANK1 chr10 127697119 + STOX1 chr10 70641714 + Exonic hg19 GBM TCGA-02-2483-01A 2 0 Out-of-frame Intra-chr q26.2 q22.1 28249 ChimerSeq STARFusion TCGA_RNA-Seq NUBPL-ZNF721 NUBPL chr14 32142780 + ZNF721 chr4 438221 - Exonic hg19 GBM TCGA-02-2483-01A 2 0 Out-of-frame Inter-chr q12 p16.3 Transcription factor 28250 ChimerSeq STARFusion TCGA_RNA-Seq OFD1-ASPH OFD1 chrX 13753465 + ASPH chr8 62596747 - Exonic hg19 GBM TCGA-02-2483-01A 2 0 Out-of-frame Inter-chr p22.2 q12.3 28251 ChimerSeq STARFusion TCGA_RNA-Seq RAB39A-CUL5 RAB39A chr11 107799521 + CUL5 chr11 107916997 + Exonic hg19 GBM TCGA-02-2483-01A 2 0 In-Frame Intra-chr q22.3 q22.3 Tumor suppressor gene 28252 ChimerSeq STARFusion TCGA_RNA-Seq RB1-ITM2B RB1 chr13 48881542 + ITM2B chr13 48827944 + Exonic hg19 GBM TCGA-02-2483-01A 2 0 In-Frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Seq+ 28253 ChimerSeq STARFusion TCGA_RNA-Seq RBM5-MCM3AP RBM5 chr3 50131308 + MCM3AP chr21 47671596 - Exonic hg19 GBM TCGA-02-2483-01A 2 0 Out-of-frame Inter-chr p21.31 Tumor suppressor gene q22.3 28254 ChimerSeq STARFusion TCGA_RNA-Seq RBM6-PSMB7 RBM6 chr3 50000118 + PSMB7 chr9 127167711 - Exonic hg19 GBM TCGA-02-2483-01A 2 0 In-Frame Inter-chr p21.31 Tumor suppressor gene q33.3 28255 ChimerSeq STARFusion TCGA_RNA-Seq SREK1-CLK1 SREK1 chr5 65449424 + CLK1 chr2 201724469 - Exonic hg19 GBM TCGA-02-2483-01A 2 0 In-Frame Inter-chr q12.3 q33.1 CMGC:CLK 28256 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D5-AZI2 TBC1D5 chr3 17413567 - AZI2 chr3 28368441 - Exonic hg19 GBM TCGA-02-2483-01A 2 0 In-Frame Intra-chr p24.3 p24.1 28257 ChimerSeq STARFusion TCGA_RNA-Seq UNC5B-GNAS UNC5B chr10 72972821 + GNAS chr20 57470667 + Exonic hg19 GBM TCGA-02-2483-01A 2 0 In-Frame Inter-chr q22.1 Tumor suppressor gene q13.32 Oncogene 28258 ChimerSeq STARFusion TCGA_RNA-Seq ZNF626-ALG8 ZNF626 chr19 20844250 - ALG8 chr11 77820627 - Exonic hg19 GBM TCGA-02-2483-01A 2 0 Out-of-frame Inter-chr p12 Transcription factor q14.1 Seq+ 28259 ChimerSeq STARFusion TCGA_RNA-Seq EIF4H-GTF2I EIF4H chr7 73604636 + GTF2I chr7 74173110 + Exonic hg19 GBM TCGA-06-2557-01A 154 21 In-Frame Intra-chr q11.23 q11.23 Transcription factor Seq+ 28260 ChimerSeq STARFusion TCGA_RNA-Seq EIF4H-LOC100093631 EIF4H chr7 73604636 + LOC100093631 chr7 74603017 - Exonic hg19 GBM TCGA-06-2557-01A 51 2 CDS-3'UTR Intra-chr q11.23 28261 ChimerSeq STARFusion TCGA_RNA-Seq CASD1-VWC2 CASD1 chr7 94147635 + VWC2 chr7 49951630 + Exonic hg19 GBM TCGA-06-2557-01A 41 20 Out-of-frame Intra-chr q21.3 p12.2 Seq+ 28262 ChimerSeq STARFusion TCGA_RNA-Seq UBXN2A-GBAS UBXN2A chr2 24207701 + GBAS chr7 56065059 + Exonic hg19 GBM TCGA-06-2557-01A 11 5 Out-of-frame Inter-chr p23.3 28263 ChimerSeq STARFusion TCGA_RNA-Seq LANCL2-PEX1 LANCL2 chr7 55459603 + PEX1 chr7 92151559 - Exonic hg19 GBM TCGA-06-2557-01A 10 2 Out-of-frame Intra-chr p11.2 q21.2 28264 ChimerSeq STARFusion TCGA_RNA-Seq EIF4H-GTF2IP1 EIF4H chr7 73604636 + GTF2IP1 chr7 72619423 + Exonic hg19 GBM TCGA-06-2557-01A 7 2 CDS-3'UTR Intra-chr q11.23 q11.23 28265 ChimerSeq STARFusion TCGA_RNA-Seq AKAP9-PON2 AKAP9 chr7 91722630 + PON2 chr7 95045609 - Exonic hg19 GBM TCGA-06-2557-01A 5 4 Out-of-frame Intra-chr q21.2 Oncogene q21.3 28266 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-06-2557-01A 4 3 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28267 ChimerSeq STARFusion TCGA_RNA-Seq UBXN2A-GBAS UBXN2A chr2 24222780 + GBAS chr7 56065059 + Exonic hg19 GBM TCGA-06-2557-01A 3 5 3'UTR-CDS Inter-chr p23.3 28268 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55268106 + SEPT14 chr7 55863785 - Exonic hg19 GBM TCGA-06-2557-01A 3 4 In-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 28269 ChimerSeq STARFusion TCGA_RNA-Seq UBXN2A-GBAS UBXN2A chr2 24205903 + GBAS chr7 56065059 + Exonic hg19 GBM TCGA-06-2557-01A 2 5 Out-of-frame Inter-chr p23.3 28270 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-06-2557-01A 2 0 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 28271 ChimerSeq STARFusion TCGA_RNA-Seq SYS1-SMYD3 SYS1 chr20 43994326 + SMYD3 chr1 245927451 - Exonic hg19 GBM TCGA-06-2557-01A 2 0 In-Frame Inter-chr q13.12 q44 Transcription factor Seq+ 28272 ChimerSeq STARFusion TCGA_RNA-Seq C12orf49-MDM2 C12orf49 chr12 117175595 - MDM2 chr12 69229609 + Exonic hg19 GBM TCGA-06-5856-01A 141 43 In-Frame Intra-chr q24.22 q15 Oncogene Seq+ 28273 ChimerSeq STARFusion TCGA_RNA-Seq SUDS3-CDK4 SUDS3 chr12 118829087 + CDK4 chr12 58145519 - Exonic hg19 GBM TCGA-06-5856-01A 108 85 CDS-5'UTR Intra-chr q24.23 q14.1 CMGC:CDK Oncogene Seq+ 28274 ChimerSeq STARFusion TCGA_RNA-Seq LOC100506844-SRRM4 LOC100506844 chr12 58329253 - SRRM4 chr12 119583186 + Exonic hg19 GBM TCGA-06-5856-01A 106 80 3'UTR-CDS Intra-chr q24.23 28275 ChimerSeq STARFusion TCGA_RNA-Seq SETD1B-KDM2B SETD1B chr12 122248741 + KDM2B chr12 122013764 - Exonic hg19 GBM TCGA-06-5856-01A 115 44 Out-of-frame Intra-chr q24.31 q24.31 Transcription factor Seq+ 28276 ChimerSeq STARFusion TCGA_RNA-Seq C12orf49-SRRM4 C12orf49 chr12 117175595 - SRRM4 chr12 119600476 + Exonic hg19 GBM TCGA-06-5856-01A 74 21 CDS-3'UTR Intra-chr q24.22 q24.23 Seq+ 28277 ChimerSeq STARFusion TCGA_RNA-Seq PSPC1-CRYL1 PSPC1 chr13 20304379 - CRYL1 chr13 20987526 - Exonic hg19 GBM TCGA-06-5856-01A 65 41 In-Frame Intra-chr q12.11 q12.11 Seq+ 28278 ChimerSeq STARFusion TCGA_RNA-Seq TMEM120B-AVIL TMEM120B chr12 122150870 + AVIL chr12 58193703 - Exonic hg19 GBM TCGA-06-5856-01A 67 29 In-Frame Intra-chr q24.31 q14.1 Seq+ 28279 ChimerSeq STARFusion TCGA_RNA-Seq NAA60-IL32 NAA60 chr16 3508181 + IL32 chr16 3115785 + Exonic hg19 GBM TCGA-06-5856-01A 52 71 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 28280 ChimerSeq STARFusion TCGA_RNA-Seq NAA60-IL32 NAA60 chr16 3498540 + IL32 chr16 3115785 + Exonic hg19 GBM TCGA-06-5856-01A 42 71 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 28281 ChimerSeq STARFusion TCGA_RNA-Seq KDM2B-KSR2 KDM2B chr12 121986782 - KSR2 chr12 118298236 - Exonic hg19 GBM TCGA-06-5856-01A 43 16 Out-of-frame Intra-chr q24.31 Transcription factor q24.23 TKL:RAF Seq+ 28282 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-MDM2 CTDSP2 chr12 58240155 - MDM2 chr12 69202988 + Exonic hg19 GBM TCGA-06-5856-01A 40 26 Out-of-frame Intra-chr q14.1 q15 Oncogene Seq+ 28283 ChimerSeq STARFusion TCGA_RNA-Seq LOC100506844-SRRM4 LOC100506844 chr12 58329253 - SRRM4 chr12 119582344 + Exonic hg19 GBM TCGA-06-5856-01A 20 80 3'UTR-CDS Intra-chr q24.23 28284 ChimerSeq STARFusion TCGA_RNA-Seq NAA60-IL32 NAA60 chr16 3508181 + IL32 chr16 3115782 + Exonic hg19 GBM TCGA-06-5856-01A 10 71 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 28285 ChimerSeq STARFusion TCGA_RNA-Seq C12orf49-MDM2 C12orf49 chr12 117175595 - MDM2 chr12 69233054 + Exonic hg19 GBM TCGA-06-5856-01A 16 43 In-Frame Intra-chr q24.22 q15 Oncogene Seq+ 28286 ChimerSeq STARFusion TCGA_RNA-Seq VASN-RBFOX1 VASN chr16 4421994 + RBFOX1 chr16 7759058 + Exonic hg19 GBM TCGA-06-5856-01A 22 10 5'UTR-CDS Intra-chr p13.3 Seq+ 28287 ChimerSeq STARFusion TCGA_RNA-Seq SETD1B-KDM2B SETD1B chr12 122248741 + KDM2B chr12 122012498 - Exonic hg19 GBM TCGA-06-5856-01A 13 44 Out-of-frame Intra-chr q24.31 q24.31 Transcription factor Seq+ 28288 ChimerSeq STARFusion TCGA_RNA-Seq NAA60-IL32 NAA60 chr16 3498540 + IL32 chr16 3115782 + Exonic hg19 GBM TCGA-06-5856-01A 6 71 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 28289 ChimerSeq STARFusion TCGA_RNA-Seq LUC7L-LOC652276 LUC7L chr16 249061 - LOC652276 chr16 2663961 + Exonic hg19 GBM TCGA-06-5856-01A 22 4 CDS-5'UTR Intra-chr p13.3 28290 ChimerSeq STARFusion TCGA_RNA-Seq HLCS-LINC00478 HLCS chr21 38334336 - LINC00478 chr21 17859810 + Exonic hg19 GBM TCGA-06-5856-01A 15 8 5'UTR-5'UTR Intra-chr q22.13 28291 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-LOC338799 CTDSP2 chr12 58240155 - LOC338799 chr12 122239714 - Exonic hg19 GBM TCGA-06-5856-01A 13 5 CDS-3'UTR Intra-chr q14.1 28292 ChimerSeq STARFusion TCGA_RNA-Seq RANBP3-PRM1 RANBP3 chr19 5927979 - PRM1 chr16 11375087 - Exonic hg19 GBM TCGA-06-5856-01A 11 5 Out-of-frame Inter-chr p13.3 p13.13 Seq+ 28293 ChimerSeq STARFusion TCGA_RNA-Seq EFCAB4B-C12orf4 EFCAB4B chr12 3782612 - C12orf4 chr12 4600400 - Exonic hg19 GBM TCGA-06-5856-01A 9 11 Out-of-frame Intra-chr p13.32 Seq+ 28294 ChimerSeq STARFusion TCGA_RNA-Seq NUDT16L1-FAHD1 NUDT16L1 chr16 4744239 + FAHD1 chr16 1888017 + Exonic hg19 GBM TCGA-06-5856-01A 8 4 In-Frame Intra-chr p13.3 p13.3 Seq+ 28295 ChimerSeq STARFusion TCGA_RNA-Seq TARS2-RPRD2 TARS2 chr1 150464965 + RPRD2 chr1 150443037 + Exonic hg19 GBM TCGA-06-5856-01A 8 4 Out-of-frame Intra-chr q21.2 q21.2 28296 ChimerSeq STARFusion TCGA_RNA-Seq MLF1IP-KIAA1430 MLF1IP chr4 185631226 - KIAA1430 chr4 186083116 - Exonic hg19 GBM TCGA-06-5856-01A 8 2 CDS-3'UTR Intra-chr 28297 ChimerSeq STARFusion TCGA_RNA-Seq LUC7L-KCTD5 LUC7L chr16 249061 - KCTD5 chr16 2745936 + Exonic hg19 GBM TCGA-06-5856-01A 7 2 In-Frame Intra-chr p13.3 p13.3 Seq+ 28298 ChimerSeq STARFusion TCGA_RNA-Seq HSF1-LOC254100 HSF1 chr8 145533558 + LOC254100 chr11 65337872 - Exonic hg19 GBM TCGA-06-5856-01A 6 4 Out-of-frame Inter-chr q24.3 Transcription factor 28299 ChimerSeq STARFusion TCGA_RNA-Seq TAOK3-XRCC6BP1 TAOK3 chr12 118810453 - XRCC6BP1 chr12 58339411 + Exonic hg19 GBM TCGA-06-5856-01A 7 0 5'UTR-CDS Intra-chr q24.23 28300 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-06-5856-01A 6 0 5'UTR-CDS Intra-chr q13 q13 28301 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80950355 - MRPS28 chr8 80831383 - Exonic hg19 GBM TCGA-06-5856-01A 4 0 Out-of-frame Intra-chr q21.13 q21.13 28302 ChimerSeq STARFusion TCGA_RNA-Seq CNOT2-ERBB3 CNOT2 chr12 70672054 + ERBB3 chr12 56493958 + Exonic hg19 GBM TCGA-06-5856-01A 3 2 In-Frame Intra-chr q15 q13.2 Oncogene Seq+ 28303 ChimerSeq STARFusion TCGA_RNA-Seq SEC61G-EGFR SEC61G chr7 54825188 - EGFR chr7 55248986 + Exonic hg19 GBM TCGA-06-5856-01A 3 1 Out-of-frame Intra-chr p11.2 p11.2 TK:EGFR Oncogene Seq+ 28304 ChimerSeq STARFusion TCGA_RNA-Seq RNFT2-OS9 RNFT2 chr12 117191865 + OS9 chr12 58109543 + Exonic hg19 GBM TCGA-06-5856-01A 3 0 In-Frame Intra-chr q24.22 q13.3 28305 ChimerSeq STARFusion TCGA_RNA-Seq RAB3IP-ERBB3 RAB3IP chr12 70150443 + ERBB3 chr12 56477535 + Exonic hg19 GBM TCGA-06-5856-01A 2 2 Out-of-frame Intra-chr q15 q13.2 Oncogene Seq+ 28306 ChimerSeq STARFusion TCGA_RNA-Seq ATR-PHF14 ATR chr3 142284963 - PHF14 chr7 11150977 + Exonic hg19 GBM TCGA-06-5856-01A 2 0 3'UTR-5'UTR Inter-chr q23 Atypical:PIKK Oncogene Tumor suppressor gene p21.3 Seq+ 28307 ChimerSeq STARFusion TCGA_RNA-Seq CRAMP1L-TVP23A CRAMP1L chr16 1691188 + TVP23A chr16 10868953 - Exonic hg19 GBM TCGA-06-5856-01A 2 0 Out-of-frame Intra-chr p13.13 28308 ChimerSeq STARFusion TCGA_RNA-Seq CRMP1-DPYSL4 CRMP1 chr4 5837642 - DPYSL4 chr10 134016150 + Exonic hg19 GBM TCGA-06-5856-01A 2 0 In-Frame Inter-chr p16.2 q26.3 28309 ChimerSeq STARFusion TCGA_RNA-Seq MT1B-MT3 MT1B chr16 56686548 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-06-5856-01A 2 0 In-Frame Intra-chr q13 q13 28310 ChimerSeq STARFusion TCGA_RNA-Seq RPUSD3-TNRC6C RPUSD3 chr3 9885149 - TNRC6C chr17 76089701 + Exonic hg19 GBM TCGA-06-5856-01A 2 0 In-Frame Inter-chr p25.3 q25.3 28311 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC2-LRP1 SMARCC2 chr12 56583135 - LRP1 chr12 57578864 + Exonic hg19 GBM TCGA-06-5856-01A 2 0 Out-of-frame Intra-chr q13.2 q13.3 28312 ChimerSeq STARFusion TCGA_RNA-Seq STK4-WISP2 STK4 chr20 43629994 + WISP2 chr20 43353379 + Exonic hg19 GBM TCGA-06-5856-01A 2 0 In-Frame Intra-chr q13.12 q13.12 28313 ChimerSeq STARFusion TCGA_RNA-Seq TMEM170A-CCDC60 TMEM170A chr16 75498366 - CCDC60 chr12 119942874 + Exonic hg19 GBM TCGA-06-5856-01A 2 0 Out-of-frame Inter-chr q23.1 q24.23 28314 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55268106 + SEPT14 chr7 55863785 - Exonic hg19 GBM TCGA-32-5222-01A 223 82 In-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 28315 ChimerSeq STARFusion TCGA_RNA-Seq MTOR-CAMTA1 MTOR chr1 11313896 - CAMTA1 chr1 6880241 + Exonic hg19 GBM TCGA-32-5222-01A 70 54 In-Frame Intra-chr p36.22 Oncogene p36.31 Tumor suppressor gene Transcription factor Seq+ 28316 ChimerSeq STARFusion TCGA_RNA-Seq KCNAB2-PPIEL KCNAB2 chr1 6052848 + PPIEL chr1 39988177 - Exonic hg19 GBM TCGA-32-5222-01A 12 7 5'UTR-3'UTR Intra-chr p36.31 p34.3 28317 ChimerSeq STARFusion TCGA_RNA-Seq MLLT3-IZUMO3 MLLT3 chr9 20620653 - IZUMO3 chr9 24545059 - Exonic hg19 GBM TCGA-32-5222-01A 10 6 Out-of-frame Intra-chr p21.3 p21.3 Seq+ 28318 ChimerSeq STARFusion TCGA_RNA-Seq PTPRU-UBIAD1 PTPRU chr1 29563229 + UBIAD1 chr1 11345701 + Exonic hg19 GBM TCGA-32-5222-01A 4 2 In-Frame Intra-chr p35.3 p36.22 Tumor suppressor gene Seq+ 28319 ChimerSeq STARFusion TCGA_RNA-Seq PHOSPHO2-SSB PHOSPHO2 chr2 170554041 + SSB chr2 170657462 + Exonic hg19 GBM TCGA-32-5222-01A 2 2 5'UTR-5'UTR Intra-chr q31.1 q31.1 28320 ChimerSeq STARFusion TCGA_RNA-Seq FAM168B-QKI FAM168B chr2 131840150 - QKI chr6 163876311 + Exonic hg19 GBM TCGA-32-5222-01A 2 0 In-Frame Inter-chr q21.1 q26 28321 ChimerSeq STARFusion TCGA_RNA-Seq FAM73A-RPL5 FAM73A chr1 78267193 + RPL5 chr1 93306108 + Exonic hg19 GBM TCGA-32-5222-01A 2 0 Out-of-frame Intra-chr p22.1 Tumor suppressor gene 28322 ChimerSeq STARFusion TCGA_RNA-Seq GIMAP2-BOD1 GIMAP2 chr7 150384175 + BOD1 chr5 173036437 - Exonic hg19 GBM TCGA-32-5222-01A 2 0 Out-of-frame Inter-chr q36.1 q35.2 28323 ChimerSeq STARFusion TCGA_RNA-Seq RPS11-TEAD2 RPS11 chr19 50001303 + TEAD2 chr19 49854622 - Exonic hg19 GBM TCGA-32-5222-01A 2 0 5'UTR-CDS Intra-chr q13.33 q13.33 Transcription factor Seq+ 28324 ChimerSeq STARFusion TCGA_RNA-Seq TTYH3-NOC4L TTYH3 chr7 2671912 + NOC4L chr12 132635526 + Exonic hg19 GBM TCGA-32-5222-01A 2 0 Out-of-frame Inter-chr p22.3 q24.33 Seq+ 28325 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119584887 - TBX15 chr1 119474455 - Exonic hg19 GBM TCGA-32-5222-01A 2 0 CDS-5'UTR Intra-chr p12 p12 Transcription factor 28326 ChimerSeq STARFusion TCGA_RNA-Seq WASF3-CDK8 WASF3 chr13 27187195 + CDK8 chr13 26911704 + Exonic hg19 GBM TCGA-32-5222-01A 2 0 5'UTR-CDS Intra-chr q12.13 q12.13 CMGC:CDK Oncogene Seq+ 28327 ChimerSeq STARFusion TCGA_RNA-Seq ZNF136-TXNL4A ZNF136 chr19 12274021 + TXNL4A chr18 77737701 - Exonic hg19 GBM TCGA-32-5222-01A 2 0 In-Frame Inter-chr p13.2 Transcription factor q23 28328 ChimerSeq STARFusion TCGA_RNA-Seq ZNF440-LOC388796 ZNF440 chr19 11925265 + LOC388796 chr20 37049745 - Exonic hg19 GBM TCGA-32-5222-01A 2 0 CDS-3'UTR Inter-chr p13.2 Transcription factor 28329 ChimerSeq STARFusion TCGA_RNA-Seq CEP85L-ROS1 CEP85L chr6 118802942 - ROS1 chr6 117641193 - Exonic hg19 GBM TCGA-06-5418-01A 7 9 In-Frame Intra-chr q22.31 q22.1 Oncogene KB Pub Seq+ 28330 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-06-5418-01A 5 1 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28331 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC24-IMMP1L DNAJC24 chr11 31392406 + IMMP1L chr11 31455117 - Exonic hg19 GBM TCGA-06-5418-01A 2 1 In-Frame Intra-chr p13 p13 Seq+ 28332 ChimerSeq STARFusion TCGA_RNA-Seq DIRAS2-LOC340515 DIRAS2 chr9 93405034 - LOC340515 chr9 93271223 - Exonic hg19 GBM TCGA-06-5418-01A 2 0 5'UTR-3'UTR Intra-chr q22.2 28333 ChimerSeq STARFusion TCGA_RNA-Seq DPY19L1P1-ZFAND3 DPY19L1P1 chr7 32621184 - ZFAND3 chr6 38029369 + Exonic hg19 GBM TCGA-06-5418-01A 2 0 3'UTR-CDS Inter-chr p14.3 p21.2 28334 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-06-5418-01A 2 0 5'UTR-CDS Intra-chr q13 q13 28335 ChimerSeq STARFusion TCGA_RNA-Seq SCAF8-RBM33 SCAF8 chr6 155055064 + RBM33 chr7 155556506 + Exonic hg19 GBM TCGA-06-5418-01A 2 0 In-Frame Inter-chr q25.2 q36.3 28336 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-DTX3 FRS2 chr12 69864310 + DTX3 chr12 58002303 + Exonic hg19 GBM TCGA-41-2571-01A 1210 1639 5'UTR-CDS Intra-chr q15 q13.3 Seq+ 28337 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-DTX3 FRS2 chr12 69864310 + DTX3 chr12 58002860 + Exonic hg19 GBM TCGA-41-2571-01A 594 1639 5'UTR-CDS Intra-chr q15 q13.3 Seq+ 28338 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-RAB3IP FRS2 chr12 69925836 + RAB3IP chr12 70178500 + Exonic hg19 GBM TCGA-41-2571-01A 394 630 5'UTR-5'UTR Intra-chr q15 q15 Seq+ 28339 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-RAB3IP FRS2 chr12 69931763 + RAB3IP chr12 70178500 + Exonic hg19 GBM TCGA-41-2571-01A 141 630 5'UTR-5'UTR Intra-chr q15 q15 Seq+ 28340 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-RAB3IP FRS2 chr12 69925836 + RAB3IP chr12 70188217 + Exonic hg19 GBM TCGA-41-2571-01A 63 630 5'UTR-5'UTR Intra-chr q15 q15 Seq+ 28341 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-C12orf10 CTDSP2 chr12 58240155 - C12orf10 chr12 53699692 + Exonic hg19 GBM TCGA-41-2571-01A 179 139 Out-of-frame Intra-chr q14.1 q13.13 Seq+ 28342 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-RAB3IP FRS2 chr12 69931763 + RAB3IP chr12 70188217 + Exonic hg19 GBM TCGA-41-2571-01A 45 630 5'UTR-5'UTR Intra-chr q15 q15 Seq+ 28343 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-C12orf10 CTDSP2 chr12 58240155 - C12orf10 chr12 53699982 + Exonic hg19 GBM TCGA-41-2571-01A 106 139 Out-of-frame Intra-chr q14.1 q13.13 Seq+ 28344 ChimerSeq STARFusion TCGA_RNA-Seq USP15-PCBP2 USP15 chr12 62654284 + PCBP2 chr12 53848510 + Exonic hg19 GBM TCGA-41-2571-01A 63 37 CDS-5'UTR Intra-chr q14.1 q13.13 Seq+ 28345 ChimerSeq STARFusion TCGA_RNA-Seq TMEM19-TSPAN8 TMEM19 chr12 72083484 + TSPAN8 chr12 71551567 - Exonic hg19 GBM TCGA-41-2571-01A 7 7 CDS-5'UTR Intra-chr q21.1 q21.1 Seq+ 28346 ChimerSeq STARFusion TCGA_RNA-Seq FAM19A2-PCBP2 FAM19A2 chr12 62585693 - PCBP2 chr12 53848510 + Exonic hg19 GBM TCGA-41-2571-01A 7 4 5'UTR-5'UTR Intra-chr q14.1 q13.13 Seq+ 28347 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-CDK4 RNA45S5 chrUn_gl000220 114138 + CDK4 chr12 58142201 - Exonic hg19 GBM TCGA-41-2571-01A 5 10 Out-of-frame Inter-chr q14.1 CMGC:CDK Oncogene 28348 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-MBP RNA45S5 chrUn_gl000220 113881 + MBP chr18 74692068 - Exonic hg19 GBM TCGA-41-2571-01A 3 10 Out-of-frame Inter-chr q23 28349 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-ITM2C RNA45S5 chrUn_gl000220 114129 + ITM2C chr2 231742877 + Exonic hg19 GBM TCGA-41-2571-01A 3 5 Out-of-frame Inter-chr q37.1 28350 ChimerSeq STARFusion TCGA_RNA-Seq TMSB15A-H2BFXP TMSB15A chrX 101769992 - H2BFXP chrX 103316442 - Exonic hg19 GBM TCGA-41-2571-01A 3 0 CDS-3'UTR Intra-chr q22.1 28351 ChimerSeq STARFusion TCGA_RNA-Seq LYRM4-RPP40 LYRM4 chr6 5216851 - RPP40 chr6 5002479 - Exonic hg19 GBM TCGA-41-2571-01A 2 0 In-Frame Intra-chr p25.1 p25.1 Seq+ 28352 ChimerSeq STARFusion TCGA_RNA-Seq NUDCD3-CAMK2B NUDCD3 chr7 44431896 - CAMK2B chr7 44302663 - Exonic hg19 GBM TCGA-41-2571-01A 2 0 Out-of-frame Intra-chr p13 p13 28353 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 GBM TCGA-41-2571-01A 2 0 CDS-5'UTR Intra-chr q23 Seq+ 28354 ChimerSeq STARFusion TCGA_RNA-Seq STRN3-EGLN3 STRN3 chr14 31495110 - EGLN3 chr14 34400421 - Exonic hg19 GBM TCGA-41-2571-01A 2 0 In-Frame Intra-chr q12 q13.1 Tumor suppressor gene Seq+ 28355 ChimerSeq STARFusion TCGA_RNA-Seq LNX1-USP46 LNX1 chr4 54373484 - USP46 chr4 53494330 - Exonic hg19 GBM TCGA-26-5134-01A 20 16 Out-of-frame Intra-chr q12 q12 Seq+ 28356 ChimerSeq STARFusion TCGA_RNA-Seq APOE-RNA45S5 APOE chr19 45411030 + RNA45S5 chrUn_gl000220 114840 + Exonic hg19 GBM TCGA-26-5134-01A 3 9 Out-of-frame Inter-chr q13.32 28357 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-PSPH EGFR chr7 55268106 + PSPH chr7 56079562 - Exonic hg19 GBM TCGA-28-5209-01A 602 324 In-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 28358 ChimerSeq STARFusion TCGA_RNA-Seq CCNT1-OS9 CCNT1 chr12 49086022 - OS9 chr12 58109543 + Exonic hg19 GBM TCGA-28-5209-01A 20 9 3'UTR-CDS Intra-chr q13.12 q13.3 Seq+ 28359 ChimerSeq STARFusion TCGA_RNA-Seq CCNT1-OS9 CCNT1 chr12 49086374 - OS9 chr12 58109543 + Exonic hg19 GBM TCGA-28-5209-01A 11 9 5'UTR-CDS Intra-chr q13.12 q13.3 Seq+ 28360 ChimerSeq STARFusion TCGA_RNA-Seq CCNT1-OS9 CCNT1 chr12 49086038 - OS9 chr12 58109543 + Exonic hg19 GBM TCGA-28-5209-01A 3 9 3'UTR-CDS Intra-chr q13.12 q13.3 Seq+ 28361 ChimerSeq STARFusion TCGA_RNA-Seq EEFSEC-SCAMP5 EEFSEC chr3 127872666 + SCAMP5 chr15 75304133 + Exonic hg19 GBM TCGA-28-5209-01A 2 3 CDS-5'UTR Inter-chr q21.3 q24.2 28362 ChimerSeq STARFusion TCGA_RNA-Seq PIAS2-ST8SIA5 PIAS2 chr18 44407922 - ST8SIA5 chr18 44284627 - Exonic hg19 GBM TCGA-28-5209-01A 2 2 In-Frame Intra-chr q21.1 q21.1 Seq+ 28363 ChimerSeq STARFusion TCGA_RNA-Seq MRPS18C-DLG1 MRPS18C chr4 84378111 + DLG1 chr3 196796131 - Exonic hg19 GBM TCGA-28-5209-01A 2 0 Out-of-frame Inter-chr q21.23 q29 Tumor suppressor gene 28364 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH1-LZTR1 NOTCH1 chr9 139396724 - LZTR1 chr22 21351521 + Exonic hg19 GBM TCGA-28-5209-01A 2 0 Out-of-frame Inter-chr q34.3 Oncogene Tumor suppressor gene q11.21 28365 ChimerSeq STARFusion TCGA_RNA-Seq SLC4A4-PICALM SLC4A4 chr4 72121116 + PICALM chr11 85670103 - Exonic hg19 GBM TCGA-28-5209-01A 2 0 Out-of-frame Inter-chr q13.3 q14.2 28366 ChimerSeq STARFusion TCGA_RNA-Seq NFASC-NTRK1 NFASC chr1 204951148 + NTRK1 chr1 156844363 + Exonic hg19 GBM TCGA-06-5411-01A 946 374 In-Frame Intra-chr q32.1 q23.1 Oncogene Seq+ 28367 ChimerSeq STARFusion TCGA_RNA-Seq ATP2B4-NFASC ATP2B4 chr1 203596347 + NFASC chr1 204889760 + Exonic hg19 GBM TCGA-06-5411-01A 18 7 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 28368 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-06-5411-01A 3 5 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28369 ChimerSeq STARFusion TCGA_RNA-Seq OPCML-NTM OPCML chr11 133402159 - NTM chr11 131781458 + Exonic hg19 GBM TCGA-06-5411-01A 4 1 In-Frame Intra-chr q25 Tumor suppressor gene q25 Seq+ 28370 ChimerSeq STARFusion TCGA_RNA-Seq LRRN2-LINC00303 LRRN2 chr1 204654448 - LINC00303 chr1 204002995 - Exonic hg19 GBM TCGA-06-5411-01A 3 1 5'UTR-3'UTR Intra-chr q32.1 q32.1 28371 ChimerSeq STARFusion TCGA_RNA-Seq ASTN1-DHRS7 ASTN1 chr1 176903288 - DHRS7 chr14 60622870 - Exonic hg19 GBM TCGA-06-5411-01A 2 0 In-Frame Inter-chr q25.2 q23.1 28372 ChimerSeq STARFusion TCGA_RNA-Seq GFOD1-TBC1D7 GFOD1 chr6 13486870 - TBC1D7 chr6 13327138 - Exonic hg19 GBM TCGA-06-5411-01A 2 0 CDS-5'UTR Intra-chr p23 p24.1 28373 ChimerSeq STARFusion TCGA_RNA-Seq MAX-APOC1 MAX chr14 65544631 - APOC1 chr19 45419447 + Exonic hg19 GBM TCGA-06-5411-01A 2 0 In-Frame Inter-chr q23.3 Oncogene Tumor suppressor gene Transcription factor q13.32 28374 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-06-5411-01A 2 0 In-Frame Intra-chr q13 Tumor suppressor gene q13 28375 ChimerSeq STARFusion TCGA_RNA-Seq TUBB2B-NME2 TUBB2B chr6 3227721 - NME2 chr17 49244188 + Exonic hg19 GBM TCGA-06-5411-01A 2 0 CDS-5'UTR Inter-chr p25.2 q21.33 Transcription factor 28376 ChimerSeq STARFusion TCGA_RNA-Seq KCNMA1-CFL1P1 KCNMA1 chr10 79010953 - CFL1P1 chr10 89578659 + Exonic hg19 GBM TCGA-06-0645-01A 6 0 CDS-5'UTR Intra-chr q22.3 28377 ChimerSeq STARFusion TCGA_RNA-Seq ATAD1-KCNMA1 ATAD1 chr10 89574195 - KCNMA1 chr10 79011014 - Exonic hg19 GBM TCGA-06-0645-01A 4 4 In-Frame Intra-chr q22.3 Seq+ 28378 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 GBM TCGA-06-0645-01A 3 1 CDS-5'UTR Intra-chr p12 p12 Transcription factor 28379 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD1-PXDNL PCMTD1 chr8 52773405 - PXDNL chr8 52567320 - Exonic hg19 GBM TCGA-06-0645-01A 2 0 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 28380 ChimerSeq STARFusion TCGA_RNA-Seq RAP1B-CPM RAP1B chr12 69004823 + CPM chr12 69326620 - Exonic hg19 GBM TCGA-06-0686-01A 54 35 5'UTR-5'UTR Intra-chr q15 q15 Seq+ 28381 ChimerSeq STARFusion TCGA_RNA-Seq RAP1B-CPM RAP1B chr12 69004823 + CPM chr12 69279669 - Exonic hg19 GBM TCGA-06-0686-01A 13 35 5'UTR-CDS Intra-chr q15 q15 Seq+ 28382 ChimerSeq STARFusion TCGA_RNA-Seq RAP1B-CPM RAP1B chr12 69004832 + CPM chr12 69326620 - Exonic hg19 GBM TCGA-06-0686-01A 12 35 5'UTR-5'UTR Intra-chr q15 q15 Seq+ 28383 ChimerSeq STARFusion TCGA_RNA-Seq LRP1-XPO5 LRP1 chr12 57539273 + XPO5 chr6 43530083 - Exonic hg19 GBM TCGA-06-0686-01A 10 5 Out-of-frame Inter-chr q13.3 p21.1 Tumor suppressor gene Seq+ 28384 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-RAP1B MDM2 chr12 69236158 + RAP1B chr12 69042479 + Exonic hg19 GBM TCGA-06-0686-01A 6 11 3'UTR-5'UTR Intra-chr q15 Oncogene q15 28385 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-TSPAN31 MDM2 chr12 69222711 + TSPAN31 chr12 58139528 + Exonic hg19 GBM TCGA-06-0686-01A 7 5 In-Frame Intra-chr q15 Oncogene q14.1 Seq+ 28386 ChimerSeq STARFusion TCGA_RNA-Seq MARCH9-CD2AP 2019_ 3_ 9_ chr12 58150867 + CD2AP chr6 47512342 + Exonic hg19 GBM TCGA-06-0686-01A 5 6 Out-of-frame Inter-chr q14.1 p12.3 Seq+ 28387 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-RAP1B MDM2 chr12 69233581 + RAP1B chr12 69042479 + Exonic hg19 GBM TCGA-06-0686-01A 3 11 CDS-5'UTR Intra-chr q15 Oncogene q15 28388 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-RAP1B MDM2 chr12 69203072 + RAP1B chr12 69047892 + Exonic hg19 GBM TCGA-06-0686-01A 3 11 In-Frame Intra-chr q15 Oncogene q15 28389 ChimerSeq STARFusion TCGA_RNA-Seq MARCH9-CD2AP 2019_ 3_ 9_ chr12 58152083 + CD2AP chr6 47512342 + Exonic hg19 GBM TCGA-06-0686-01A 4 6 Out-of-frame Inter-chr q14.1 p12.3 Seq+ 28390 ChimerSeq STARFusion TCGA_RNA-Seq SLC29A1-CPM SLC29A1 chr6 44187519 + CPM chr12 69326620 - Exonic hg19 GBM TCGA-06-0686-01A 5 0 5'UTR-5'UTR Inter-chr p21.1 q15 28391 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-RAP1B MDM2 chr12 69229764 + RAP1B chr12 69042479 + Exonic hg19 GBM TCGA-06-0686-01A 2 11 CDS-5'UTR Intra-chr q15 Oncogene q15 28392 ChimerSeq STARFusion TCGA_RNA-Seq PCSK5-CDK4 PCSK5 chr9 78936374 + CDK4 chr12 58143079 - Exonic hg19 GBM TCGA-06-0686-01A 4 0 Out-of-frame Inter-chr q21.13 q14.1 CMGC:CDK Oncogene 28393 ChimerSeq STARFusion TCGA_RNA-Seq MARCH9-CD2AP 2019_ 3_ 9_ chr12 58150867 + CD2AP chr6 47471016 + Exonic hg19 GBM TCGA-06-0686-01A 2 6 Out-of-frame Inter-chr q14.1 p12.3 Seq+ 28394 ChimerSeq STARFusion TCGA_RNA-Seq LRP1-XPO5 LRP1 chr12 57539273 + XPO5 chr6 43528744 - Exonic hg19 GBM TCGA-06-0686-01A 2 5 Out-of-frame Inter-chr q13.3 p21.1 Tumor suppressor gene Seq+ 28395 ChimerSeq STARFusion TCGA_RNA-Seq POLR2J-SPRNP1 POLR2J chr7 102113955 - SPRNP1 chr10 135380472 - Exonic hg19 GBM TCGA-06-0686-01A 3 0 Out-of-frame Inter-chr q22.1 28396 ChimerSeq STARFusion TCGA_RNA-Seq CPM-NUP107 CPM chr12 69326458 - NUP107 chr12 69084411 + Exonic hg19 GBM TCGA-06-0686-01A 2 1 In-Frame Intra-chr q15 q15 Seq+ 28397 ChimerSeq STARFusion TCGA_RNA-Seq PPM1H-CAPN11 PPM1H chr12 63113951 - CAPN11 chr6 44134495 + Exonic hg19 GBM TCGA-06-0686-01A 2 0 Out-of-frame Inter-chr q14.2 p21.1 Seq+ 28398 ChimerSeq STARFusion TCGA_RNA-Seq RAP1B-MRPL14 RAP1B chr12 69004823 + MRPL14 chr6 44084366 - Exonic hg19 GBM TCGA-06-0686-01A 2 0 5'UTR-5'UTR Inter-chr q15 p21.1 Seq+ 28399 ChimerSeq STARFusion TCGA_RNA-Seq SLC29A1-CPM SLC29A1 chr6 44191378 + CPM chr12 69326620 - Exonic hg19 GBM TCGA-06-0686-01A 2 0 5'UTR-5'UTR Inter-chr p21.1 q15 28400 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-28-2510-01A 2 0 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28401 ChimerSeq STARFusion TCGA_RNA-Seq NUPL2-DKC1 NUPL2 chr7 23226765 + DKC1 chrX 153996577 + Exonic hg19 GBM TCGA-28-2510-01A 2 0 In-Frame Inter-chr p15.3 q28 28402 ChimerSeq STARFusion TCGA_RNA-Seq OS9-KIF5A OS9 chr12 58090156 + KIF5A chr12 57960909 + Exonic hg19 GBM TCGA-41-5651-01A 66 45 In-Frame Intra-chr q13.3 q13.3 Seq+ 28403 ChimerSeq STARFusion TCGA_RNA-Seq TXNDC11-LITAF TXNDC11 chr16 11815433 - LITAF chr16 11650591 - Exonic hg19 GBM TCGA-41-5651-01A 35 35 CDS-5'UTR Intra-chr p13.13 p13.13 Tumor suppressor gene 28404 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-INHBE TSFM chr12 58186856 + INHBE chr12 57849877 + Exonic hg19 GBM TCGA-41-5651-01A 14 10 In-Frame Intra-chr q14.1 q13.3 Seq+ 28405 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-INHBE TSFM chr12 58186856 + INHBE chr12 57849151 + Exonic hg19 GBM TCGA-41-5651-01A 13 10 CDS-5'UTR Intra-chr q14.1 q13.3 Seq+ 28406 ChimerSeq STARFusion TCGA_RNA-Seq CLEC16A-TXNDC11 CLEC16A chr16 11076848 + TXNDC11 chr16 11778101 - Exonic hg19 GBM TCGA-41-5651-01A 13 9 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 28407 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-INHBE TSFM chr12 58186856 + INHBE chr12 57849527 + Exonic hg19 GBM TCGA-41-5651-01A 7 10 In-Frame Intra-chr q14.1 q13.3 Seq+ 28408 ChimerSeq STARFusion TCGA_RNA-Seq B4GALNT1-TSFM B4GALNT1 chr12 58020445 - TSFM chr12 58189960 + Exonic hg19 GBM TCGA-41-5651-01A 8 5 3'UTR-CDS Intra-chr q13.3 q14.1 Seq+ 28409 ChimerSeq STARFusion TCGA_RNA-Seq TDRD3-GLI1 TDRD3 chr13 60971539 + GLI1 chr12 57864100 + Exonic hg19 GBM TCGA-41-5651-01A 6 1 Out-of-frame Inter-chr q21.2 q13.3 Tumor suppressor gene Transcription factor Seq+ 28410 ChimerSeq STARFusion TCGA_RNA-Seq NEGR1-ZRANB2 NEGR1 chr1 72748002 - ZRANB2 chr1 71544391 - Exonic hg19 GBM TCGA-41-5651-01A 3 5 In-Frame Intra-chr p31.1 p31.1 Seq+ 28411 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-OS9 TSFM chr12 58180945 + OS9 chr12 58109872 + Exonic hg19 GBM TCGA-41-5651-01A 2 3 Out-of-frame Intra-chr q14.1 q13.3 Seq+ 28412 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-41-5651-01A 2 2 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28413 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 GBM TCGA-41-5651-01A 2 1 CDS-5'UTR Intra-chr q23 Seq+ 28414 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF25-LOC100506844 ARHGEF25 chr12 58006927 + LOC100506844 chr12 58325520 - Exonic hg19 GBM TCGA-41-5651-01A 2 0 CDS-3'UTR Intra-chr q13.3 28415 ChimerSeq STARFusion TCGA_RNA-Seq ATP5J-SBK1 ATP5J chr21 27107626 - SBK1 chr16 28328706 + Exonic hg19 GBM TCGA-41-5651-01A 2 0 5'UTR-5'UTR Inter-chr q21.3 p12.1 28416 ChimerSeq STARFusion TCGA_RNA-Seq C11orf84-MACROD1 C11orf84 chr11 63586474 + MACROD1 chr11 63782753 - Exonic hg19 GBM TCGA-28-1753-01A 6 1 In-Frame Intra-chr q13.1 q13.1 Seq+ 28417 ChimerSeq STARFusion TCGA_RNA-Seq LOC100996307-NFIX LOC100996307 chr19 42901376 + NFIX chr19 13183861 + Exonic hg19 GBM TCGA-28-1753-01A 6 1 Out-of-frame Intra-chr p13.13 Transcription factor 28418 ChimerSeq STARFusion TCGA_RNA-Seq PPP6C-C11orf84 PPP6C chr9 127933364 - C11orf84 chr11 63594400 + Exonic hg19 GBM TCGA-28-1753-01A 3 3 Out-of-frame Inter-chr q33.3 q13.1 Seq+ 28419 ChimerSeq STARFusion TCGA_RNA-Seq CLASP2-BRAT1 CLASP2 chr3 33557515 - BRAT1 chr7 2583596 - Exonic hg19 GBM TCGA-28-1753-01A 2 0 Out-of-frame Inter-chr p22.3 p22.3 28420 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119584887 - TBX15 chr1 119474455 - Exonic hg19 GBM TCGA-28-1753-01A 2 0 CDS-5'UTR Intra-chr p12 p12 Transcription factor 28421 ChimerSeq STARFusion TCGA_RNA-Seq ARID1B-TIAM2 ARID1B chr6 157100605 + TIAM2 chr6 155411423 + Exonic hg19 GBM TCGA-19-5960-01A 56 16 CDS-5'UTR Intra-chr q25.3 Oncogene q25.2 Seq+ 28422 ChimerSeq STARFusion TCGA_RNA-Seq NELL2-OS9 NELL2 chr12 45269008 - OS9 chr12 58109543 + Exonic hg19 GBM TCGA-19-5960-01A 17 5 Out-of-frame Intra-chr q12 q13.3 Seq+ 28423 ChimerSeq STARFusion TCGA_RNA-Seq RDX-SS18 RDX chr11 110101311 - SS18 chr18 23596784 - Exonic hg19 GBM TCGA-19-5960-01A 3 0 Out-of-frame Inter-chr q22.3 q11.2 28424 ChimerSeq STARFusion TCGA_RNA-Seq FAM120B-TIAM2 FAM120B chr6 170639638 + TIAM2 chr6 155577618 + Exonic hg19 GBM TCGA-19-5960-01A 2 2 In-Frame Intra-chr q25.2 28425 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 GBM TCGA-19-5960-01A 2 1 CDS-5'UTR Intra-chr p12 p12 Transcription factor 28426 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1524-RPL7A KIAA1524 chr3 108308121 - RPL7A chr9 136217095 + Exonic hg19 GBM TCGA-19-5960-01A 2 0 Out-of-frame Inter-chr q13.13 28427 ChimerSeq STARFusion TCGA_RNA-Seq MAP7-PERP MAP7 chr6 136871480 - PERP chr6 138417631 - Exonic hg19 GBM TCGA-19-5960-01A 2 0 In-Frame Intra-chr q23.3 q23.3 28428 ChimerSeq STARFusion TCGA_RNA-Seq SCD5-TMEM150C SCD5 chr4 83601860 - TMEM150C chr4 83425820 - Exonic hg19 GBM TCGA-19-5960-01A 2 0 CDS-5'UTR Intra-chr q21.22 q21.22 Seq+ 28429 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 GBM TCGA-19-5960-01A 2 0 CDS-5'UTR Intra-chr q23 Seq+ 28430 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-15-1444-01A 7 6 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28431 ChimerSeq STARFusion TCGA_RNA-Seq TACC2-CASC2 TACC2 chr10 123923507 + CASC2 chr10 119811642 + Exonic hg19 GBM TCGA-15-1444-01A 5 1 CDS-5'UTR Intra-chr q26.13 q26.11 Tumor suppressor gene 28432 ChimerSeq STARFusion TCGA_RNA-Seq TACC2-CASC2 TACC2 chr10 123923507 + CASC2 chr10 119966034 + Exonic hg19 GBM TCGA-15-1444-01A 3 1 CDS-5'UTR Intra-chr q26.13 q26.11 Tumor suppressor gene 28433 ChimerSeq STARFusion TCGA_RNA-Seq LOC100507266-MSX1 LOC100507266 chr4 4651269 + MSX1 chr4 4864428 + Exonic hg19 GBM TCGA-15-1444-01A 3 0 5'UTR-CDS Intra-chr p16.2 Transcription factor 28434 ChimerSeq STARFusion TCGA_RNA-Seq RASSF8-SSPN RASSF8 chr12 26208379 + SSPN chr12 26377226 + Exonic hg19 GBM TCGA-15-1444-01A 2 0 Out-of-frame Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 28435 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 GBM TCGA-15-1444-01A 2 0 In-Frame Intra-chr p11.21 p11.21 28436 ChimerSeq STARFusion TCGA_RNA-Seq WDR41-RPF2 WDR41 chr5 76745585 - RPF2 chr6 111306209 + Exonic hg19 GBM TCGA-15-1444-01A 2 0 Out-of-frame Inter-chr q14.1 q21 28437 ChimerSeq STARFusion TCGA_RNA-Seq UBXN7-RPL39L UBXN7 chr3 196159198 - RPL39L chr3 186845850 - Exonic hg19 GBM TCGA-06-5415-01A 264 132 CDS-5'UTR Intra-chr q29 q27.3 Seq+ 28438 ChimerSeq STARFusion TCGA_RNA-Seq CARD8-SULT2B1 CARD8 chr19 48752780 - SULT2B1 chr19 49099996 + Exonic hg19 GBM TCGA-06-5415-01A 108 79 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 28439 ChimerSeq STARFusion TCGA_RNA-Seq TXNDC15-ARPC2 TXNDC15 chr5 134210220 + ARPC2 chr2 219103387 + Exonic hg19 GBM TCGA-06-5415-01A 70 48 In-Frame Inter-chr q31.1 q35 Seq+ 28440 ChimerSeq STARFusion TCGA_RNA-Seq CARD8-SULT2B1 CARD8 chr19 48753008 - SULT2B1 chr19 49099996 + Exonic hg19 GBM TCGA-06-5415-01A 33 79 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 28441 ChimerSeq STARFusion TCGA_RNA-Seq RPL36-TTYH1 RPL36 chr19 5690611 + TTYH1 chr19 54946722 + Exonic hg19 GBM TCGA-06-5415-01A 27 14 In-Frame Intra-chr p13.3 Seq+ 28442 ChimerSeq STARFusion TCGA_RNA-Seq LNPEP-ERAP2 LNPEP chr5 96298434 + ERAP2 chr5 96224883 + Exonic hg19 GBM TCGA-06-5415-01A 21 11 Out-of-frame Intra-chr q15 q15 28443 ChimerSeq STARFusion TCGA_RNA-Seq CHD4-FYTTD1 CHD4 chr12 6710814 - FYTTD1 chr3 197501020 + Exonic hg19 GBM TCGA-06-5415-01A 11 1 Out-of-frame Inter-chr p13.31 q29 28444 ChimerSeq STARFusion TCGA_RNA-Seq APBA2-CHD4 APBA2 chr15 29213952 + CHD4 chr12 6710932 - Exonic hg19 GBM TCGA-06-5415-01A 8 8 5'UTR-CDS Inter-chr p13.31 Seq+ 28445 ChimerSeq STARFusion TCGA_RNA-Seq LRRN2-LEMD1 LRRN2 chr1 204654448 - LEMD1 chr1 205389702 - Exonic hg19 GBM TCGA-06-5415-01A 7 2 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 28446 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-06-5415-01A 5 0 5'UTR-CDS Intra-chr q13 q13 28447 ChimerSeq STARFusion TCGA_RNA-Seq ATP1B2-GFAP ATP1B2 chr17 7560964 + GFAP chr17 42984525 - Exonic hg19 GBM TCGA-06-5415-01A 3 3 Out-of-frame Intra-chr p13.1 q21.31 28448 ChimerSeq STARFusion TCGA_RNA-Seq WWOX-C15orf41 WWOX chr16 78198186 + C15orf41 chr15 37100525 + Exonic hg19 GBM TCGA-06-5415-01A 3 3 Out-of-frame Inter-chr q23.1 Tumor suppressor gene q14 Seq+ 28449 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-06-5415-01A 2 6 In-Frame Intra-chr q13 Tumor suppressor gene q13 28450 ChimerSeq STARFusion TCGA_RNA-Seq METTL12-DPF2 METTL12 chr11 62433418 + DPF2 chr11 65119154 + Exonic hg19 GBM TCGA-06-5415-01A 2 5 In-Frame Intra-chr q12.3 q13.1 Seq+ 28451 ChimerSeq STARFusion TCGA_RNA-Seq C11orf54-PGM1 C11orf54 chr11 93474894 + PGM1 chr1 64125257 + Exonic hg19 GBM TCGA-06-5415-01A 3 0 5'UTR-CDS Inter-chr q21 p31.3 28452 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-06-5415-01A 2 3 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28453 ChimerSeq STARFusion TCGA_RNA-Seq TMEM161B-LINC00461 TMEM161B chr5 87564538 - LINC00461 chr5 87837888 - Exonic hg19 GBM TCGA-06-5415-01A 2 3 CDS-3'UTR Intra-chr q14.3 q14.3 28454 ChimerSeq STARFusion TCGA_RNA-Seq LONP1-INSR LONP1 chr19 5705783 - INSR chr19 7184648 - Exonic hg19 GBM TCGA-06-5415-01A 2 2 Out-of-frame Intra-chr p13.3 p13.2 TK:InsR 28455 ChimerSeq STARFusion TCGA_RNA-Seq STX7-SPPL2A STX7 chr6 132824585 - SPPL2A chr15 51041943 - Exonic hg19 GBM TCGA-06-5415-01A 2 1 Out-of-frame Inter-chr q23.2 q21.2 28456 ChimerSeq STARFusion TCGA_RNA-Seq ACSL3-FARSB ACSL3 chr2 223752606 + FARSB chr2 223436741 - Exonic hg19 GBM TCGA-06-5415-01A 2 0 5'UTR-CDS Intra-chr q36.1 q36.1 28457 ChimerSeq STARFusion TCGA_RNA-Seq AGAP1-SPPL3 AGAP1 chr2 236403493 + SPPL3 chr12 121248689 - Exonic hg19 GBM TCGA-06-5415-01A 2 0 Out-of-frame Inter-chr q37.2 q24.31 28458 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT4-EGFEM1P AGPAT4 chr6 161694970 - EGFEM1P chr3 168538981 + Exonic hg19 GBM TCGA-06-5415-01A 2 0 5'UTR-5'UTR Inter-chr q26 q26.2 28459 ChimerSeq STARFusion TCGA_RNA-Seq LOC339822-TMEM18 LOC339822 chr2 806037 - TMEM18 chr2 672862 - Exonic hg19 GBM TCGA-06-5415-01A 2 0 3'UTR-CDS Intra-chr p25.3 28460 ChimerSeq STARFusion TCGA_RNA-Seq METTL24-RNF182 METTL24 chr6 110620125 - RNF182 chr6 13974441 + Exonic hg19 GBM TCGA-06-5415-01A 2 0 CDS-5'UTR Intra-chr q21 p23 28461 ChimerSeq STARFusion TCGA_RNA-Seq MMD2-TGIF2 MMD2 chr7 4949512 - TGIF2 chr20 35207144 + Exonic hg19 GBM TCGA-06-5415-01A 2 0 CDS-5'UTR Inter-chr p22.1 q11.23 Transcription factor 28462 ChimerSeq STARFusion TCGA_RNA-Seq MT1DP-MT3 MT1DP chr16 56678088 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-06-5415-01A 2 0 5'UTR-CDS Intra-chr q13 Tumor suppressor gene q13 28463 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT2A MT1L chr16 56652156 + MT2A chr16 56643175 + Exonic hg19 GBM TCGA-06-5415-01A 2 0 5'UTR-CDS Intra-chr q13 q13 Tumor suppressor gene 28464 ChimerSeq STARFusion TCGA_RNA-Seq NCS1-YWHAE NCS1 chr9 132935006 + YWHAE chr17 1265302 - Exonic hg19 GBM TCGA-06-5415-01A 2 0 Out-of-frame Inter-chr q34.11 p13.3 28465 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL6-ABI2 OSBPL6 chr2 179149848 + ABI2 chr2 204281631 + Exonic hg19 GBM TCGA-06-5415-01A 2 0 5'UTR-CDS Intra-chr q31.2 q33.2 Tumor suppressor gene 28466 ChimerSeq STARFusion TCGA_RNA-Seq PALM2-LPAR1 PALM2 chr9 112542813 + LPAR1 chr9 113638002 - Exonic hg19 GBM TCGA-06-5415-01A 2 0 Out-of-frame Intra-chr q31.3 q31.3 28467 ChimerSeq STARFusion TCGA_RNA-Seq PDSS2-DCLK1 PDSS2 chr6 107595233 - DCLK1 chr13 36413313 - Exonic hg19 GBM TCGA-06-5415-01A 2 0 In-Frame Inter-chr q21 Tumor suppressor gene q13.3 CAMK:DCAMKL 28468 ChimerSeq STARFusion TCGA_RNA-Seq PITPNA-SPG20OS PITPNA chr17 1437393 - SPG20OS chr13 36939637 + Exonic hg19 GBM TCGA-06-5415-01A 2 0 CDS-5'UTR Inter-chr p13.3 28469 ChimerSeq STARFusion TCGA_RNA-Seq PRKD3-BIRC6 PRKD3 chr2 37516499 - BIRC6 chr2 32832522 + Exonic hg19 GBM TCGA-06-5415-01A 2 0 In-Frame Intra-chr p22.2 p22.3 28470 ChimerSeq STARFusion TCGA_RNA-Seq RFX4-SUGP2 RFX4 chr12 107048129 + SUGP2 chr19 19101958 - Exonic hg19 GBM TCGA-06-5415-01A 2 0 CDS-3'UTR Inter-chr q23.3 Transcription factor p13.11 28471 ChimerSeq STARFusion TCGA_RNA-Seq RPRD1A-AP2B1 RPRD1A chr18 33647217 - AP2B1 chr17 33977549 + Exonic hg19 GBM TCGA-06-5415-01A 2 0 Out-of-frame Inter-chr q12.2 q12 28472 ChimerSeq STARFusion TCGA_RNA-Seq SCLY-C1orf61 SCLY chr2 239003163 + C1orf61 chr1 156374393 - Exonic hg19 GBM TCGA-06-5415-01A 2 0 Out-of-frame Inter-chr q37.3 q22 28473 ChimerSeq STARFusion TCGA_RNA-Seq SYNGR1-CTBP1 SYNGR1 chr22 39746114 + CTBP1 chr4 1235307 - Exonic hg19 GBM TCGA-06-5415-01A 2 0 CDS-5'UTR Inter-chr q13.1 p16.3 28474 ChimerSeq STARFusion TCGA_RNA-Seq TTC3-PGS1 TTC3 chr21 38445664 + PGS1 chr17 76410960 + Exonic hg19 GBM TCGA-06-5415-01A 2 0 5'UTR-CDS Inter-chr q22.13 q25.3 28475 ChimerSeq STARFusion TCGA_RNA-Seq TTLL5-IFT43 TTLL5 chr14 76368567 + IFT43 chr14 76488670 + Exonic hg19 GBM TCGA-06-5415-01A 2 0 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 28476 ChimerSeq STARFusion TCGA_RNA-Seq TYRO3-SPATA5L1 TYRO3 chr15 41857339 + SPATA5L1 chr15 45713241 + Exonic hg19 GBM TCGA-06-5415-01A 2 0 In-Frame Intra-chr q15.1 TK:Axl q21.1 28477 ChimerSeq STARFusion TCGA_RNA-Seq YEATS2-SLC4A7 YEATS2 chr3 183433050 + SLC4A7 chr3 27418336 - Exonic hg19 GBM TCGA-06-5415-01A 2 0 Out-of-frame Intra-chr q27.1 p24.1 28478 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-14-1825-01A 2 0 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 28479 ChimerSeq STARFusion TCGA_RNA-Seq SLC37A3-GRB10 SLC37A3 chr7 140098216 - GRB10 chr7 50737560 - Exonic hg19 GBM TCGA-14-1825-01A 2 0 5'UTR-CDS Intra-chr q34 p12.1 28480 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-SPP2 DGKD chr2 234299129 + SPP2 chr2 234967480 + Exonic hg19 GBM TCGA-28-2499-01A 25 13 In-Frame Intra-chr q37.1 Seq+ 28481 ChimerSeq STARFusion TCGA_RNA-Seq AHDC1-WASF2 AHDC1 chr1 27929908 - WASF2 chr1 27755443 - Exonic hg19 GBM TCGA-28-2499-01A 24 4 5'UTR-5'UTR Intra-chr p35.3 Transcription factor p36.11 Seq+ 28482 ChimerSeq STARFusion TCGA_RNA-Seq SRRT-ZAN SRRT chr7 100473333 + ZAN chr7 100377068 + Exonic hg19 GBM TCGA-28-2499-01A 7 3 In-Frame Intra-chr q22.1 q22.1 Seq+ 28483 ChimerSeq STARFusion TCGA_RNA-Seq GIGYF2-THAP4 GIGYF2 chr2 233562102 + THAP4 chr2 242573494 - Exonic hg19 GBM TCGA-28-2499-01A 5 1 5'UTR-CDS Intra-chr q37.1 q37.3 Transcription factor Seq+ 28484 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-28-2499-01A 5 0 In-Frame Intra-chr q13 Tumor suppressor gene q13 28485 ChimerSeq STARFusion TCGA_RNA-Seq SRRT-ZAN SRRT chr7 100473333 + ZAN chr7 100382245 + Exonic hg19 GBM TCGA-28-2499-01A 3 3 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 28486 ChimerSeq STARFusion TCGA_RNA-Seq DANCR-PHF14 DANCR chr4 53579126 + PHF14 chr7 11150977 + Exonic hg19 GBM TCGA-28-2499-01A 2 0 5'UTR-5'UTR Inter-chr q12 p21.3 28487 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-LOC649395 YWHAE chr17 1268213 - LOC649395 chr7 63894406 + Exonic hg19 GBM TCGA-12-0821-01A 3 1 Out-of-frame Inter-chr p13.3 28488 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-12-0821-01A 2 3 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 28489 ChimerSeq STARFusion TCGA_RNA-Seq CTNND2-BTF3 CTNND2 chr5 11117562 - BTF3 chr5 72798313 + Exonic hg19 GBM TCGA-12-0821-01A 2 0 In-Frame Intra-chr p15.2 q13.2 28490 ChimerSeq STARFusion TCGA_RNA-Seq DTD2-MPHOSPH8 DTD2 chr14 31922481 - MPHOSPH8 chr13 20245346 + Exonic hg19 GBM TCGA-12-0821-01A 2 0 Out-of-frame Inter-chr q12 q12.11 28491 ChimerSeq STARFusion TCGA_RNA-Seq FNDC7-RABGGTB FNDC7 chr1 109273550 + RABGGTB chr1 76260195 + Exonic hg19 GBM TCGA-12-0821-01A 2 0 Out-of-frame Intra-chr p13.3 p31.1 28492 ChimerSeq STARFusion TCGA_RNA-Seq KRT75-VIM KRT75 chr12 52822040 - VIM chr10 17277845 + Exonic hg19 GBM TCGA-12-0821-01A 2 0 In-Frame Inter-chr q13.13 p13 Tumor suppressor gene 28493 ChimerSeq STARFusion TCGA_RNA-Seq LOC100129961-TMEM163 LOC100129961 chr2 135635090 - TMEM163 chr2 135470889 - Exonic hg19 GBM TCGA-12-0821-01A 2 0 3'UTR-CDS Intra-chr q21.3 28494 ChimerSeq STARFusion TCGA_RNA-Seq RAB30-PRCP RAB30 chr11 82745214 - PRCP chr11 82571159 - Exonic hg19 GBM TCGA-12-0821-01A 2 0 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 28495 ChimerSeq STARFusion TCGA_RNA-Seq ZNF738-CHMP1A ZNF738 chr19 21558766 + CHMP1A chr16 89713739 - Exonic hg19 GBM TCGA-12-0821-01A 2 0 5'UTR-CDS Inter-chr p12 q24.3 Seq+ 28496 ChimerSeq STARFusion TCGA_RNA-Seq CEP70-PCCB CEP70 chr3 138289160 - PCCB chr3 136035783 + Exonic hg19 GBM TCGA-12-3653-01A 2 0 In-Frame Intra-chr q22.3 q22.3 28497 ChimerSeq STARFusion TCGA_RNA-Seq MT1B-MT3 MT1B chr16 56686548 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-12-3653-01A 2 0 In-Frame Intra-chr q13 q13 28498 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-12-3653-01A 2 0 5'UTR-CDS Intra-chr q13 q13 28499 ChimerSeq STARFusion TCGA_RNA-Seq FREM2-MTRF1 FREM2 chr13 39438743 + MTRF1 chr13 41808143 - Exonic hg19 GBM TCGA-27-1831-01A 10 4 In-Frame Intra-chr q13.3 q14.11 Seq+ 28500 ChimerSeq STARFusion TCGA_RNA-Seq NR3C1-HMHB1 NR3C1 chr5 142693567 - HMHB1 chr5 143200045 + Exonic hg19 GBM TCGA-27-1831-01A 5 6 In-Frame Intra-chr q31.3 Transcription factor q31.3 Seq+ 28501 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-27-1831-01A 3 1 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 28502 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-SEC61G EGFR chr7 55087058 + SEC61G chr7 54825287 - Exonic hg19 GBM TCGA-27-1831-01A 2 1 CDS-5'UTR Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 28503 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A12-NFASC SLC25A12 chr2 172749715 - NFASC chr1 204913354 + Exonic hg19 GBM TCGA-27-1831-01A 2 1 CDS-5'UTR Inter-chr q31.1 q32.1 Seq+ 28504 ChimerSeq STARFusion TCGA_RNA-Seq ABR-YWHAE ABR chr17 1082961 - YWHAE chr17 1273035 - Exonic hg19 GBM TCGA-27-1831-01A 2 0 CDS-3'UTR Intra-chr p13.3 p13.3 Seq+ 28505 ChimerSeq STARFusion TCGA_RNA-Seq CHDH-PRMT3 CHDH chr3 53874956 - PRMT3 chr11 20473676 + Exonic hg19 GBM TCGA-27-1831-01A 2 0 5'UTR-CDS Inter-chr p21.1 p15.1 Transcription factor 28506 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-27-1831-01A 2 0 5'UTR-CDS Intra-chr q13 q13 28507 ChimerSeq STARFusion TCGA_RNA-Seq NDUFA4-PHF14 NDUFA4 chr7 10979643 - PHF14 chr7 11150977 + Exonic hg19 GBM TCGA-27-1831-01A 2 0 CDS-5'UTR Intra-chr p21.3 p21.3 Seq+ 28508 ChimerSeq STARFusion TCGA_RNA-Seq PARP9-PHYH PARP9 chr3 122255015 - PHYH chr10 13320354 - Exonic hg19 GBM TCGA-27-1831-01A 2 0 Out-of-frame Inter-chr q21.1 p13 28509 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHH2-LOC541471 PLEKHH2 chr2 43871935 + LOC541471 chr2 112187197 - Exonic hg19 GBM TCGA-27-1831-01A 2 0 CDS-3'UTR Intra-chr p21 28510 ChimerSeq STARFusion TCGA_RNA-Seq PXMP2-FGF18 PXMP2 chr12 133277955 + FGF18 chr5 170863097 + Exonic hg19 GBM TCGA-27-1831-01A 2 0 In-Frame Inter-chr q24.33 q35.1 28511 ChimerSeq STARFusion TCGA_RNA-Seq SRSF5-MEAF6 SRSF5 chr14 70235968 + MEAF6 chr1 37961519 - Exonic hg19 GBM TCGA-27-1831-01A 2 0 Out-of-frame Inter-chr q24.1 p34.3 28512 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D22A-CUL4A TBC1D22A chr22 47290742 + CUL4A chr13 113873259 + Exonic hg19 GBM TCGA-27-1831-01A 2 0 In-Frame Inter-chr q13.31 q34 28513 ChimerSeq STARFusion TCGA_RNA-Seq THOC5-FAM122C THOC5 chr22 29945041 - FAM122C chrX 133979235 + Exonic hg19 GBM TCGA-27-1831-01A 2 0 In-Frame Inter-chr q12.2 q26.3 28514 ChimerSeq STARFusion TCGA_RNA-Seq USB1-CNOT1 USB1 chr16 58044016 + CNOT1 chr16 58555221 - Exonic hg19 GBM TCGA-27-1831-01A 2 0 Out-of-frame Intra-chr q21 q21 28515 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-76-4932-01A 8 0 5'UTR-CDS Intra-chr q13 q13 28516 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642595 + MT3 chr16 56623782 + Exonic hg19 GBM TCGA-76-4932-01A 3 5 In-Frame Intra-chr q13 Tumor suppressor gene q13 28517 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-76-4932-01A 2 5 In-Frame Intra-chr q13 Tumor suppressor gene q13 28518 ChimerSeq STARFusion TCGA_RNA-Seq RAB3GAP1-R3HDM1 RAB3GAP1 chr2 135815656 + R3HDM1 chr2 136467003 + Exonic hg19 GBM TCGA-76-4932-01A 3 0 Out-of-frame Intra-chr q21.3 q21.3 28519 ChimerSeq STARFusion TCGA_RNA-Seq TMEM200B-KHDRBS1 TMEM200B chr1 29450368 - KHDRBS1 chr1 32525764 + Exonic hg19 GBM TCGA-76-4932-01A 2 2 5'UTR-3'UTR Intra-chr p35.3 p35.2 Seq+ 28520 ChimerSeq STARFusion TCGA_RNA-Seq KRT80-VIM KRT80 chr12 52565982 - VIM chr10 17277845 + Exonic hg19 GBM TCGA-76-4932-01A 2 0 In-Frame Inter-chr q13.13 p13 Tumor suppressor gene 28521 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-76-4932-01A 2 0 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28522 ChimerSeq STARFusion TCGA_RNA-Seq PITRM1-PDXK PITRM1 chr10 3212296 - PDXK chr21 45165960 + Exonic hg19 GBM TCGA-76-4932-01A 2 0 Out-of-frame Inter-chr p15.2 q22.3 28523 ChimerSeq STARFusion TCGA_RNA-Seq TCOF1-CD74 TCOF1 chr5 149755117 + CD74 chr5 149785884 - Exonic hg19 GBM TCGA-76-4932-01A 2 0 In-Frame Intra-chr q32 q33.1 28524 ChimerSeq STARFusion TCGA_RNA-Seq CEP350-ACBD6 CEP350 chr1 180047809 + ACBD6 chr1 180464660 - Exonic hg19 GBM TCGA-06-5417-01A 3 1 In-Frame Intra-chr q25.2 q25.3 28525 ChimerSeq STARFusion TCGA_RNA-Seq PTPRZ1-MET PTPRZ1 chr7 121513611 + MET chr7 116339125 + Exonic hg19 GBM TCGA-06-5417-01A 2 2 CDS-5'UTR Intra-chr q31.32 q31.2 TK:Met Oncogene Pub Seq+ 28526 ChimerSeq STARFusion TCGA_RNA-Seq NBPF9-KIF5B NBPF9 chr1 144614998 + KIF5B chr10 32307490 - Exonic hg19 GBM TCGA-06-5417-01A 2 0 5'UTR-CDS Inter-chr q21.2 p11.22 28527 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-14-1829-01A 3 3 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 28528 ChimerSeq STARFusion TCGA_RNA-Seq C12orf60-PDE6H C12orf60 chr12 14956685 + PDE6H chr12 15130906 + Exonic hg19 GBM TCGA-14-1829-01A 3 0 5'UTR-5'UTR Intra-chr p12.3 p12.3 28529 ChimerSeq STARFusion TCGA_RNA-Seq KLC2-SPARC KLC2 chr11 66029278 + SPARC chr5 151046064 - Exonic hg19 GBM TCGA-14-1829-01A 3 0 Out-of-frame Inter-chr q13.2 q33.1 Tumor suppressor gene 28530 ChimerSeq STARFusion TCGA_RNA-Seq MT1A-MT3 MT1A chr16 56673192 + MT3 chr16 56623447 + Exonic hg19 GBM TCGA-14-1829-01A 3 0 Out-of-frame Intra-chr q13 q13 28531 ChimerSeq STARFusion TCGA_RNA-Seq SUMO2-H3F3B SUMO2 chr17 73178909 - H3F3B chr17 73775265 - Exonic hg19 GBM TCGA-14-1829-01A 2 1 CDS-5'UTR Intra-chr q25.1 q25.1 28532 ChimerSeq STARFusion TCGA_RNA-Seq ARID2-SUB1 ARID2 chr12 46125097 + SUB1 chr5 32599067 + Exonic hg19 GBM TCGA-14-1829-01A 2 0 Out-of-frame Inter-chr q12 Oncogene Tumor suppressor gene Transcription factor p13.3 28533 ChimerSeq STARFusion TCGA_RNA-Seq BTBD1-HDGFRP3 BTBD1 chr15 83725141 - HDGFRP3 chr15 83832827 - Exonic hg19 GBM TCGA-14-1829-01A 2 0 In-Frame Intra-chr q25.2 28534 ChimerSeq STARFusion TCGA_RNA-Seq DIRAS2-LOC340515 DIRAS2 chr9 93405034 - LOC340515 chr9 93271223 - Exonic hg19 GBM TCGA-14-1829-01A 2 0 5'UTR-3'UTR Intra-chr q22.2 28535 ChimerSeq STARFusion TCGA_RNA-Seq FLJ31306-PSMA3 FLJ31306 chr14 58740697 - PSMA3 chr14 58718837 + Exonic hg19 GBM TCGA-14-1829-01A 2 0 3'UTR-CDS Intra-chr q23.1 Seq+ 28536 ChimerSeq STARFusion TCGA_RNA-Seq FLJ39739-SEC22B FLJ39739 chr1 147931724 - SEC22B chr1 145103908 + Exonic hg19 GBM TCGA-14-1829-01A 2 0 3'UTR-CDS Intra-chr p12 28537 ChimerSeq STARFusion TCGA_RNA-Seq GBE1-PPP1R2 GBE1 chr3 81640188 - PPP1R2 chr3 195251694 - Exonic hg19 GBM TCGA-14-1829-01A 2 0 Out-of-frame Intra-chr p12.2 q29 28538 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-14-1829-01A 2 0 5'UTR-CDS Intra-chr q13 q13 28539 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-14-1829-01A 2 0 In-Frame Intra-chr q13 Tumor suppressor gene q13 28540 ChimerSeq STARFusion TCGA_RNA-Seq MYO9B-C15orf57 MYO9B chr19 17273932 + C15orf57 chr15 40855226 - Exonic hg19 GBM TCGA-14-1829-01A 2 0 In-Frame Inter-chr p13.11 q15.1 28541 ChimerSeq STARFusion TCGA_RNA-Seq NAA38-CAPZA2 NAA38 chr7 117828459 + CAPZA2 chr7 116556114 + Exonic hg19 GBM TCGA-14-1829-01A 2 0 Out-of-frame Intra-chr p13.1 q31.2 28542 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R2B-FBXO15 PPP2R2B chr5 146257565 - FBXO15 chr18 71740965 - Exonic hg19 GBM TCGA-14-1829-01A 2 0 Out-of-frame Inter-chr q32 q22.3 28543 ChimerSeq STARFusion TCGA_RNA-Seq TIMM23-LOC100507217 TIMM23 chr10 51606988 - LOC100507217 chr15 93440954 + Exonic hg19 GBM TCGA-14-1829-01A 2 0 CDS-5'UTR Inter-chr q11.22 28544 ChimerSeq STARFusion TCGA_RNA-Seq SLC4A1AP-GPN1 SLC4A1AP chr2 27892254 + GPN1 chr2 27870703 + Exonic hg19 GBM TCGA-06-0743-01A 25 21 In-Frame Intra-chr p23.3 p23.3 Seq+ 28545 ChimerSeq STARFusion TCGA_RNA-Seq CNST-SCCPDH CNST chr1 246729965 + SCCPDH chr1 246890194 + Exonic hg19 GBM TCGA-06-0743-01A 4 3 5'UTR-CDS Intra-chr q44 q44 28546 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP6-DIABLO ARHGAP6 chrX 11272668 - DIABLO chr12 122709191 - Exonic hg19 GBM TCGA-06-0743-01A 2 0 Out-of-frame Inter-chr p22.2 q24.31 Tumor suppressor gene 28547 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 GBM TCGA-06-0743-01A 2 0 In-Frame Intra-chr p11.21 p11.21 28548 ChimerSeq STARFusion TCGA_RNA-Seq C12orf5-TSPAN9 C12orf5 chr12 4430469 + TSPAN9 chr12 3310343 + Exonic hg19 GBM TCGA-06-0157-01A 130 33 CDS-5'UTR Intra-chr p13.33 Seq+ 28549 ChimerSeq STARFusion TCGA_RNA-Seq NFASC-SOX13 NFASC chr1 204797910 + SOX13 chr1 204082043 + Exonic hg19 GBM TCGA-06-0157-01A 45 28 5'UTR-5'UTR Intra-chr q32.1 q32.1 Transcription factor Seq+ 28550 ChimerSeq STARFusion TCGA_RNA-Seq RBMS2-LITAF RBMS2 chr12 56915873 + LITAF chr16 11650591 - Exonic hg19 GBM TCGA-06-0157-01A 39 7 CDS-5'UTR Inter-chr q13.3 p13.13 Tumor suppressor gene Seq+ 28551 ChimerSeq STARFusion TCGA_RNA-Seq C12orf5-TSPAN9 C12orf5 chr12 4430469 + TSPAN9 chr12 3387587 + Exonic hg19 GBM TCGA-06-0157-01A 28 33 Out-of-frame Intra-chr p13.33 Seq+ 28552 ChimerSeq STARFusion TCGA_RNA-Seq NAT8L-DBNDD1 NAT8L chr4 2062889 + DBNDD1 chr16 90075838 - Exonic hg19 GBM TCGA-06-0157-01A 27 15 In-Frame Inter-chr p16.3 q24.3 Seq+ 28553 ChimerSeq STARFusion TCGA_RNA-Seq NFASC-SOX13 NFASC chr1 204797910 + SOX13 chr1 204083449 + Exonic hg19 GBM TCGA-06-0157-01A 10 28 5'UTR-CDS Intra-chr q32.1 q32.1 Transcription factor Seq+ 28554 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-OS9 CTDSP2 chr12 58240155 - OS9 chr12 58109543 + Exonic hg19 GBM TCGA-06-0157-01A 5 0 Out-of-frame Intra-chr q14.1 q13.3 28555 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-06-0157-01A 4 3 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28556 ChimerSeq STARFusion TCGA_RNA-Seq NTRK2-CLU NTRK2 chr9 87285556 + CLU chr8 27455767 - Exonic hg19 GBM TCGA-06-0157-01A 3 1 5'UTR-CDS Inter-chr q21.33 Oncogene p21.1 Tumor suppressor gene 28557 ChimerSeq STARFusion TCGA_RNA-Seq METTL14-PRMT1 METTL14 chr4 119631336 + PRMT1 chr19 50187187 + Exonic hg19 GBM TCGA-06-0157-01A 3 0 Out-of-frame Inter-chr q26 q13.33 28558 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 GBM TCGA-06-0157-01A 2 1 CDS-5'UTR Intra-chr p12 p12 Transcription factor 28559 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-DHX37 NCOR2 chr12 124950719 - DHX37 chr12 125450358 - Exonic hg19 GBM TCGA-06-0878-01A 21 17 In-Frame Intra-chr q24.31 q24.31 Seq+ 28560 ChimerSeq STARFusion TCGA_RNA-Seq OPA3-EIF1 OPA3 chr19 46087881 - EIF1 chr17 39846030 + Exonic hg19 GBM TCGA-06-0878-01A 5 5 In-Frame Inter-chr q13.32 q21.2 Seq+ 28561 ChimerSeq STARFusion TCGA_RNA-Seq SOD2-HECTD3 SOD2 chr6 160109227 - HECTD3 chr1 45475955 - Exonic hg19 GBM TCGA-06-0878-01A 3 0 Out-of-frame Inter-chr q25.3 Tumor suppressor gene p34.1 28562 ChimerSeq STARFusion TCGA_RNA-Seq B2M-ZC3H6 B2M chr15 45003811 + ZC3H6 chr2 113057426 + Exonic hg19 GBM TCGA-06-0878-01A 2 0 Out-of-frame Inter-chr Oncogene q14.1 28563 ChimerSeq STARFusion TCGA_RNA-Seq KDM3A-IVNS1ABP KDM3A chr2 86709225 + IVNS1ABP chr1 185276794 - Exonic hg19 GBM TCGA-06-0878-01A 2 0 In-Frame Inter-chr p11.2 Tumor suppressor gene q25.3 28564 ChimerSeq STARFusion TCGA_RNA-Seq NBR2-NUDT3 NBR2 chr17 41283287 + NUDT3 chr6 34256708 - Exonic hg19 GBM TCGA-06-0878-01A 2 0 5'UTR-CDS Inter-chr q21.31 p21.31 28565 ChimerSeq STARFusion TCGA_RNA-Seq PTPN23-SMARCC1 PTPN23 chr3 47422670 + SMARCC1 chr3 47651817 - Exonic hg19 GBM TCGA-06-0878-01A 2 0 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene 28566 ChimerSeq STARFusion TCGA_RNA-Seq TMOD3-PICALM TMOD3 chr15 52194233 + PICALM chr11 85722179 - Exonic hg19 GBM TCGA-06-0878-01A 2 0 In-Frame Inter-chr q21.2 q14.2 28567 ChimerSeq STARFusion TCGA_RNA-Seq COL26A1-GGCT COL26A1 chr7 101176424 + GGCT chr7 30536851 - Exonic hg19 GBM TCGA-12-0616-01A 16 4 Out-of-frame Intra-chr q22.1 p14.3 Seq+ 28568 ChimerSeq STARFusion TCGA_RNA-Seq SMURF1-COL26A1 SMURF1 chr7 98741349 - COL26A1 chr7 101176363 + Exonic hg19 GBM TCGA-12-0616-01A 7 0 Out-of-frame Intra-chr q22.1 Seq+ 28569 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-CDK4 RNA45S5 chrUn_gl000220 114128 + CDK4 chr12 58142211 - Exonic hg19 GBM TCGA-12-0616-01A 3 12 Out-of-frame Inter-chr q14.1 CMGC:CDK Oncogene 28570 ChimerSeq STARFusion TCGA_RNA-Seq SNX13-SDK1 SNX13 chr7 17979907 - SDK1 chr7 4245511 + Exonic hg19 GBM TCGA-12-0616-01A 5 1 Out-of-frame Intra-chr p21.1 p22.2 Seq+ 28571 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-KRT86 MDM2 chr12 69218431 + KRT86 chr12 52702017 + Exonic hg19 GBM TCGA-12-0616-01A 3 3 Out-of-frame Intra-chr q15 Oncogene q13.13 28572 ChimerSeq STARFusion TCGA_RNA-Seq PDE1C-VOPP1 PDE1C chr7 32091166 - VOPP1 chr7 55565383 - Exonic hg19 GBM TCGA-12-0616-01A 3 2 In-Frame Intra-chr p14.3 p11.2 Seq+ 28573 ChimerSeq STARFusion TCGA_RNA-Seq FLJ43663-GATSL1 FLJ43663 chr7 130737184 - GATSL1 chr7 74422160 + Exonic hg19 GBM TCGA-12-0616-01A 3 0 3'UTR-CDS Intra-chr 28574 ChimerSeq STARFusion TCGA_RNA-Seq ACHE-CCDC132 ACHE chr7 100490786 - CCDC132 chr7 92963429 + Exonic hg19 GBM TCGA-12-0616-01A 2 2 In-Frame Intra-chr q22.1 Tumor suppressor gene 28575 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R3B-NOC4L PPP2R3B chrX 306251 - NOC4L chr12 132635526 + Exonic hg19 GBM TCGA-12-0616-01A 2 0 Out-of-frame Inter-chr p22.33 q24.33 28576 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 GBM TCGA-12-0616-01A 2 0 In-Frame Intra-chr p11.21 p11.21 28577 ChimerSeq STARFusion TCGA_RNA-Seq UNC80-STAT3 UNC80 chr2 210834615 + STAT3 chr17 40478217 - Exonic hg19 GBM TCGA-12-0616-01A 2 0 In-Frame Inter-chr q34 q21.2 Oncogene Tumor suppressor gene Transcription factor 28578 ChimerSeq STARFusion TCGA_RNA-Seq MRPL50-ERP44 MRPL50 chr9 104160783 - ERP44 chr9 102822454 - Exonic hg19 GBM TCGA-06-0744-01A 317 287 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 28579 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-SEC61G EGFR chr7 55087058 + SEC61G chr7 54825287 - Exonic hg19 GBM TCGA-06-0744-01A 66 62 CDS-5'UTR Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 28580 ChimerSeq STARFusion TCGA_RNA-Seq RMI1-STX17 RMI1 chr9 86595806 + STX17 chr9 102691060 + Exonic hg19 GBM TCGA-06-0744-01A 17 20 5'UTR-CDS Intra-chr q21.32 q31.1 Seq+ 28581 ChimerSeq STARFusion TCGA_RNA-Seq FAM219A-POLN FAM219A chr9 34458202 - POLN chr4 2097660 - Exonic hg19 GBM TCGA-06-0744-01A 8 5 Out-of-frame Inter-chr p13.3 p16.3 Seq+ 28582 ChimerSeq STARFusion TCGA_RNA-Seq FAM219A-POLN FAM219A chr9 34458202 - POLN chr4 2083470 - Exonic hg19 GBM TCGA-06-0744-01A 2 5 Out-of-frame Inter-chr p13.3 p16.3 Seq+ 28583 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-06-0744-01A 2 4 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28584 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD10-RTN4 ANKRD10 chr13 111558380 - RTN4 chr2 55201003 - Exonic hg19 GBM TCGA-06-0744-01A 2 0 Out-of-frame Inter-chr q34 p16.1 Tumor suppressor gene 28585 ChimerSeq STARFusion TCGA_RNA-Seq LNX1-OCIAD1 LNX1 chr4 54424041 - OCIAD1 chr4 48862742 + Exonic hg19 GBM TCGA-06-0744-01A 2 0 Out-of-frame Intra-chr q12 p11 28586 ChimerSeq STARFusion TCGA_RNA-Seq PIAS2-ST8SIA5 PIAS2 chr18 44407922 - ST8SIA5 chr18 44272218 - Exonic hg19 GBM TCGA-06-0744-01A 2 0 In-Frame Intra-chr q21.1 q21.1 Seq+ 28587 ChimerSeq STARFusion TCGA_RNA-Seq PPCDC-C15orf39 PPCDC chr15 75320794 + C15orf39 chr15 75498340 + Exonic hg19 GBM TCGA-06-0744-01A 2 0 CDS-5'UTR Intra-chr q24.2 q24.2 28588 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 GBM TCGA-06-0744-01A 2 0 In-Frame Intra-chr p11.21 p11.21 28589 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF4-HM13 TM9SF4 chr20 30697558 + HM13 chr20 30136832 + Exonic hg19 GBM TCGA-06-0238-01A 15 4 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 28590 ChimerSeq STARFusion TCGA_RNA-Seq DDIT3-CTDSP2 DDIT3 chr12 57914200 - CTDSP2 chr12 58218101 - Exonic hg19 GBM TCGA-06-0238-01A 9 0 Out-of-frame Intra-chr q13.3 Oncogene Transcription factor q14.1 Seq+ 28591 ChimerSeq STARFusion TCGA_RNA-Seq FOXM1-SLC2A14 FOXM1 chr12 2977729 - SLC2A14 chr12 7970630 - Exonic hg19 GBM TCGA-06-0238-01A 5 6 In-Frame Intra-chr p13.33 Transcription factor p13.31 Seq+ 28592 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-06-0238-01A 2 6 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28593 ChimerSeq STARFusion TCGA_RNA-Seq MT1A-MT3 MT1A chr16 56673192 + MT3 chr16 56623447 + Exonic hg19 GBM TCGA-06-0238-01A 3 0 Out-of-frame Intra-chr q13 q13 28594 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF4-HM13 TM9SF4 chr20 30697558 + HM13 chr20 30137867 + Exonic hg19 GBM TCGA-06-0238-01A 2 4 In-Frame Intra-chr q11.21 q11.21 Seq+ 28595 ChimerSeq STARFusion TCGA_RNA-Seq RORA-PRPF4B RORA chr15 61521252 - PRPF4B chr6 4031793 + Exonic hg19 GBM TCGA-06-0238-01A 2 1 Out-of-frame Inter-chr q22.2 Transcription factor p25.2 28596 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-B4GALNT1 CTDSP2 chr12 58240155 - B4GALNT1 chr12 58025916 - Exonic hg19 GBM TCGA-06-0238-01A 2 0 CDS-5'UTR Intra-chr q14.1 q13.3 Seq+ 28597 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-XRCC6BP1 CTDSP2 chr12 58240155 - XRCC6BP1 chr12 58339411 + Exonic hg19 GBM TCGA-06-0238-01A 2 0 In-Frame Intra-chr q14.1 28598 ChimerSeq STARFusion TCGA_RNA-Seq DTX3-MARS DTX3 chr12 58000301 + MARS chr12 57898008 + Exonic hg19 GBM TCGA-06-0238-01A 2 0 Out-of-frame Intra-chr q13.3 q13.3 28599 ChimerSeq STARFusion TCGA_RNA-Seq EIF4A2-ACTR3 EIF4A2 chr3 186502266 + ACTR3 chr2 114691856 + Exonic hg19 GBM TCGA-06-0238-01A 2 0 In-Frame Inter-chr q27.3 q14.1 28600 ChimerSeq STARFusion TCGA_RNA-Seq GPM6B-RAB9A GPM6B chrX 13956626 - RAB9A chrX 13721933 + Exonic hg19 GBM TCGA-06-0238-01A 2 0 CDS-5'UTR Intra-chr p22.2 p22.2 28601 ChimerSeq STARFusion TCGA_RNA-Seq MAGI2-TBXAS1 MAGI2 chr7 78256436 - TBXAS1 chr7 139480539 + Exonic hg19 GBM TCGA-06-0238-01A 2 0 CDS-5'UTR Intra-chr q21.11 q34 28602 ChimerSeq STARFusion TCGA_RNA-Seq NOP56-LDLRAD4 NOP56 chr20 2634039 + LDLRAD4 chr18 13621116 + Exonic hg19 GBM TCGA-06-0238-01A 2 0 Out-of-frame Inter-chr p13 p11.21 28603 ChimerSeq STARFusion TCGA_RNA-Seq ARIH2-CAMP ARIH2 chr3 48965246 + CAMP chr3 48265844 + Exonic hg19 GBM TCGA-14-2554-01A 95 68 In-Frame Intra-chr p21.31 p21.31 Seq+ 28604 ChimerSeq STARFusion TCGA_RNA-Seq PRKAR2A-SPINK8 PRKAR2A chr3 48884768 - SPINK8 chr3 48351436 - Exonic hg19 GBM TCGA-14-2554-01A 44 16 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 28605 ChimerSeq STARFusion TCGA_RNA-Seq ARIH2-CAMP ARIH2 chr3 48956431 + CAMP chr3 48265844 + Exonic hg19 GBM TCGA-14-2554-01A 12 68 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 28606 ChimerSeq STARFusion TCGA_RNA-Seq CEP85L-SYTL3 CEP85L chr6 118953616 - SYTL3 chr6 159166512 + Exonic hg19 GBM TCGA-14-2554-01A 17 16 Out-of-frame Intra-chr q22.31 q25.3 Seq+ 28607 ChimerSeq STARFusion TCGA_RNA-Seq PRKAR2A-SPINK8 PRKAR2A chr3 48884768 - SPINK8 chr3 48354125 - Exonic hg19 GBM TCGA-14-2554-01A 5 16 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 28608 ChimerSeq STARFusion TCGA_RNA-Seq LOC100130075-SZRD1 LOC100130075 chr12 69198614 - SZRD1 chr1 16721764 + Exonic hg19 GBM TCGA-14-2554-01A 3 0 Out-of-frame Inter-chr p36.13 28609 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-14-2554-01A 3 0 5'UTR-CDS Intra-chr q13 q13 28610 ChimerSeq STARFusion TCGA_RNA-Seq PRKAR2A-NME6 PRKAR2A chr3 48884768 - NME6 chr3 48340013 - Exonic hg19 GBM TCGA-14-2554-01A 2 1 Out-of-frame Intra-chr p21.31 p21.31 28611 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF18-TIMM44 ARHGEF18 chr19 7460133 + TIMM44 chr19 7999123 - Exonic hg19 GBM TCGA-14-2554-01A 2 0 5'UTR-CDS Intra-chr p13.2 p13.2 28612 ChimerSeq STARFusion TCGA_RNA-Seq ARNT2-ST20 ARNT2 chr15 80767564 + ST20 chr15 80200026 - Exonic hg19 GBM TCGA-14-2554-01A 2 0 CDS-5'UTR Intra-chr q25.1 Transcription factor q25.1 Tumor suppressor gene 28613 ChimerSeq STARFusion TCGA_RNA-Seq ATIC-RBM39 ATIC chr2 216203630 + RBM39 chr20 34326939 - Exonic hg19 GBM TCGA-14-2554-01A 2 0 In-Frame Inter-chr q35 q11.22 28614 ChimerSeq STARFusion TCGA_RNA-Seq DNM3-NDP DNM3 chr1 172348322 + NDP chrX 43809272 - Exonic hg19 GBM TCGA-14-2554-01A 2 0 In-Frame Inter-chr q24.3 p11.3 28615 ChimerSeq STARFusion TCGA_RNA-Seq FOXP1-CLK1 FOXP1 chr3 71408301 - CLK1 chr2 201724469 - Exonic hg19 GBM TCGA-14-2554-01A 2 0 5'UTR-CDS Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor q33.1 CMGC:CLK 28616 ChimerSeq STARFusion TCGA_RNA-Seq GLE1-RBM5 GLE1 chr9 131267183 + RBM5 chr3 50150816 + Exonic hg19 GBM TCGA-14-2554-01A 2 0 In-Frame Inter-chr q34.11 p21.31 Tumor suppressor gene 28617 ChimerSeq STARFusion TCGA_RNA-Seq LOC100507266-MSX1 LOC100507266 chr4 4651269 + MSX1 chr4 4864428 + Exonic hg19 GBM TCGA-14-2554-01A 2 0 5'UTR-CDS Intra-chr p16.2 Transcription factor 28618 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-14-2554-01A 2 0 In-Frame Intra-chr q13 Tumor suppressor gene q13 28619 ChimerSeq STARFusion TCGA_RNA-Seq STX16-SAT1 STX16 chr20 57245659 + SAT1 chrX 23803445 + Exonic hg19 GBM TCGA-14-2554-01A 2 0 Out-of-frame Inter-chr q13.32 p22.11 28620 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-TMEM222 WASF2 chr1 27816497 - TMEM222 chr1 27657211 + Exonic hg19 GBM TCGA-14-2554-01A 2 0 5'UTR-5'UTR Intra-chr p36.11 p36.11 Seq+ 28621 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-12-3652-01A 26 0 5'UTR-CDS Intra-chr q13 q13 28622 ChimerSeq STARFusion TCGA_RNA-Seq NFX1-C9orf24 NFX1 chr9 33295425 + C9orf24 chr9 34382867 - Exonic hg19 GBM TCGA-12-3652-01A 14 10 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 28623 ChimerSeq STARFusion TCGA_RNA-Seq MT1X-MT3 MT1X chr16 56717143 + MT3 chr16 56623486 + Exonic hg19 GBM TCGA-12-3652-01A 15 3 Out-of-frame Intra-chr q13 q13 28624 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-12-3652-01A 9 15 In-Frame Intra-chr q13 Tumor suppressor gene q13 28625 ChimerSeq STARFusion TCGA_RNA-Seq RPL37A-IGFBP2 RPL37A chr2 217364754 + IGFBP2 chr2 217525280 + Exonic hg19 GBM TCGA-12-3652-01A 7 8 Out-of-frame Intra-chr q35 q35 28626 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642595 + MT3 chr16 56623782 + Exonic hg19 GBM TCGA-12-3652-01A 5 15 In-Frame Intra-chr q13 Tumor suppressor gene q13 28627 ChimerSeq STARFusion TCGA_RNA-Seq MT1IP-MT3 MT1IP chr16 56711026 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-12-3652-01A 7 0 5'UTR-CDS Intra-chr q13 28628 ChimerSeq STARFusion TCGA_RNA-Seq METTL14-PRMT1 METTL14 chr4 119631336 + PRMT1 chr19 50187187 + Exonic hg19 GBM TCGA-12-3652-01A 4 0 Out-of-frame Inter-chr q26 q13.33 28629 ChimerSeq STARFusion TCGA_RNA-Seq CASZ1-GTF2A1 CASZ1 chr1 10753931 - GTF2A1 chr14 81670448 - Exonic hg19 GBM TCGA-12-3652-01A 3 1 Out-of-frame Inter-chr p36.22 Transcription factor q31.1 28630 ChimerSeq STARFusion TCGA_RNA-Seq ZNF589-FBXW12 ZNF589 chr3 48302429 + FBXW12 chr3 48416844 + Exonic hg19 GBM TCGA-12-3652-01A 2 2 In-Frame Intra-chr p21.31 Transcription factor p21.31 Seq+ 28631 ChimerSeq STARFusion TCGA_RNA-Seq KRBOX1-FAM198A KRBOX1 chr3 42983563 + FAM198A chr3 43095013 + Exonic hg19 GBM TCGA-12-3652-01A 2 0 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 28632 ChimerSeq STARFusion TCGA_RNA-Seq LOC100507266-MSX1 LOC100507266 chr4 4651269 + MSX1 chr4 4864428 + Exonic hg19 GBM TCGA-12-3652-01A 2 0 5'UTR-CDS Intra-chr p16.2 Transcription factor 28633 ChimerSeq STARFusion TCGA_RNA-Seq NRCAM-ACN9 NRCAM chr7 107830089 - ACN9 chr7 96810324 + Exonic hg19 GBM TCGA-12-3652-01A 2 0 Out-of-frame Intra-chr q31.1 Tumor suppressor gene 28634 ChimerSeq STARFusion TCGA_RNA-Seq PARP11-B3GALNT2 PARP11 chr12 3938076 - B3GALNT2 chr1 235658138 - Exonic hg19 GBM TCGA-12-3652-01A 2 0 In-Frame Inter-chr p13.32 28635 ChimerSeq STARFusion TCGA_RNA-Seq UBXN4-UBL5 UBXN4 chr2 136511137 + UBL5 chr19 9939268 + Exonic hg19 GBM TCGA-12-3652-01A 2 0 Out-of-frame Inter-chr q21.3 p13.2 Tumor suppressor gene 28636 ChimerSeq STARFusion TCGA_RNA-Seq NDRG3-SAMHD1 NDRG3 chr20 35374448 - SAMHD1 chr20 35575207 - Exonic hg19 GBM TCGA-27-2519-01A 5 0 5'UTR-CDS Intra-chr q11.23 q11.23 28637 ChimerSeq STARFusion TCGA_RNA-Seq HDAC1-SERINC2 HDAC1 chr1 32768334 + SERINC2 chr1 31883232 + Exonic hg19 GBM TCGA-27-2519-01A 3 6 In-Frame Intra-chr p35.2 Tumor suppressor gene p35.2 Seq+ 28638 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-27-2519-01A 3 1 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 28639 ChimerSeq STARFusion TCGA_RNA-Seq ATP5I-CBX5 ATP5I chr4 667092 - CBX5 chr12 54635689 - Exonic hg19 GBM TCGA-27-2519-01A 2 0 Out-of-frame Inter-chr p16.3 q13.13 Tumor suppressor gene 28640 ChimerSeq STARFusion TCGA_RNA-Seq EIF2D-CHMP1A EIF2D chr1 206769067 - CHMP1A chr16 89713739 - Exonic hg19 GBM TCGA-27-2519-01A 2 0 In-Frame Inter-chr q32.1 q24.3 28641 ChimerSeq STARFusion TCGA_RNA-Seq ZNF658-RECQL4 ZNF658 chr9 40792005 - RECQL4 chr8 145737172 - Exonic hg19 GBM TCGA-27-2519-01A 2 0 5'UTR-CDS Inter-chr q21.11 Transcription factor q24.3 Oncogene 28642 ChimerSeq STARFusion TCGA_RNA-Seq GIGYF2-NGEF GIGYF2 chr2 233621044 + NGEF chr2 233750079 - Exonic hg19 GBM TCGA-06-2562-01A 6 7 Out-of-frame Intra-chr q37.1 q37.1 Seq+ 28643 ChimerSeq STARFusion TCGA_RNA-Seq CDK5RAP2-AVEN CDK5RAP2 chr9 123199573 - AVEN chr15 34168196 - Exonic hg19 GBM TCGA-06-2562-01A 7 1 In-Frame Inter-chr q33.2 q14 Seq+ 28644 ChimerSeq STARFusion TCGA_RNA-Seq RAB27A-ASTN2 RAB27A chr15 55516087 - ASTN2 chr9 119626012 - Exonic hg19 GBM TCGA-06-2562-01A 7 0 In-Frame Inter-chr q21.3 q33.1 Seq+ 28645 ChimerSeq STARFusion TCGA_RNA-Seq NARG2-ALDH1A2 NARG2 chr15 60768262 - ALDH1A2 chr15 58306479 - Exonic hg19 GBM TCGA-06-2562-01A 5 5 Out-of-frame Intra-chr q21.3 Tumor suppressor gene 28646 ChimerSeq STARFusion TCGA_RNA-Seq POTEE-ACTG1 POTEE chr2 132021517 + ACTG1 chr17 79478985 - Exonic hg19 GBM TCGA-06-2562-01A 4 0 Out-of-frame Inter-chr q21.1 q25.3 28647 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L2-UGT1A1 DIS3L2 chr2 233028342 + UGT1A1 chr2 234675680 + Exonic hg19 GBM TCGA-06-2562-01A 3 0 Out-of-frame Intra-chr q37.1 q37.1 Oncogene 28648 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L2-UGT1A10 DIS3L2 chr2 233028342 + UGT1A10 chr2 234675680 + Exonic hg19 GBM TCGA-06-2562-01A 3 0 Out-of-frame Intra-chr q37.1 q37.1 28649 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L2-UGT1A3 DIS3L2 chr2 233028342 + UGT1A3 chr2 234675680 + Exonic hg19 GBM TCGA-06-2562-01A 3 0 Out-of-frame Intra-chr q37.1 q37.1 28650 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L2-UGT1A4 DIS3L2 chr2 233028342 + UGT1A4 chr2 234675680 + Exonic hg19 GBM TCGA-06-2562-01A 3 0 Out-of-frame Intra-chr q37.1 q37.1 28651 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L2-UGT1A5 DIS3L2 chr2 233028342 + UGT1A5 chr2 234675680 + Exonic hg19 GBM TCGA-06-2562-01A 3 0 Out-of-frame Intra-chr q37.1 q37.1 28652 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L2-UGT1A6 DIS3L2 chr2 233028342 + UGT1A6 chr2 234675680 + Exonic hg19 GBM TCGA-06-2562-01A 3 0 Out-of-frame Intra-chr q37.1 q37.1 28653 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L2-UGT1A7 DIS3L2 chr2 233028342 + UGT1A7 chr2 234675680 + Exonic hg19 GBM TCGA-06-2562-01A 3 0 Out-of-frame Intra-chr q37.1 q37.1 28654 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L2-UGT1A8 DIS3L2 chr2 233028342 + UGT1A8 chr2 234675680 + Exonic hg19 GBM TCGA-06-2562-01A 3 0 Out-of-frame Intra-chr q37.1 q37.1 28655 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L2-UGT1A9 DIS3L2 chr2 233028342 + UGT1A9 chr2 234675680 + Exonic hg19 GBM TCGA-06-2562-01A 3 0 Out-of-frame Intra-chr q37.1 q37.1 28656 ChimerSeq STARFusion TCGA_RNA-Seq KRBOX1-FAM198A KRBOX1 chr3 42983563 + FAM198A chr3 43095013 + Exonic hg19 GBM TCGA-06-2562-01A 3 0 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 28657 ChimerSeq STARFusion TCGA_RNA-Seq SV2B-AQP9 SV2B chr15 91643593 + AQP9 chr15 58458872 + Exonic hg19 GBM TCGA-06-2562-01A 2 4 5'UTR-CDS Intra-chr q26.1 q21.3 Seq+ 28658 ChimerSeq STARFusion TCGA_RNA-Seq SV2B-AQP9 SV2B chr15 91672040 + AQP9 chr15 58458872 + Exonic hg19 GBM TCGA-06-2562-01A 2 4 5'UTR-CDS Intra-chr q26.1 q21.3 Seq+ 28659 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 GBM TCGA-06-2562-01A 2 1 CDS-5'UTR Intra-chr q23 Seq+ 28660 ChimerSeq STARFusion TCGA_RNA-Seq AP3S1-AQPEP AP3S1 chr5 115205825 + AQPEP chr5 115318984 + Exonic hg19 GBM TCGA-06-2562-01A 2 0 Out-of-frame Intra-chr q22.3 28661 ChimerSeq STARFusion TCGA_RNA-Seq DBT-CCBL2 DBT chr1 100700992 - CCBL2 chr1 89408774 - Exonic hg19 GBM TCGA-06-2562-01A 2 0 Out-of-frame Intra-chr p21.2 28662 ChimerSeq STARFusion TCGA_RNA-Seq GAS7-CHMP4A GAS7 chr17 9923094 - CHMP4A chr14 24681035 - Exonic hg19 GBM TCGA-06-2562-01A 2 0 In-Frame Inter-chr p13.1 q12 Seq+ 28663 ChimerSeq STARFusion TCGA_RNA-Seq ROCK2-PON2 ROCK2 chr2 11357216 - PON2 chr7 95041789 - Exonic hg19 GBM TCGA-06-2562-01A 2 0 Out-of-frame Inter-chr p25.1 AGC:DMPK q21.3 28664 ChimerSeq STARFusion TCGA_RNA-Seq SLC35F1-SCAF8 SLC35F1 chr6 118229062 + SCAF8 chr6 155095123 + Exonic hg19 GBM TCGA-06-2562-01A 2 0 Out-of-frame Intra-chr q22.2 q25.2 28665 ChimerSeq STARFusion TCGA_RNA-Seq AKAP6-EGLN3 AKAP6 chr14 32903023 + EGLN3 chr14 34400421 - Exonic hg19 GBM TCGA-06-5413-01A 128 56 In-Frame Intra-chr q12 q13.1 Tumor suppressor gene Seq+ 28666 ChimerSeq STARFusion TCGA_RNA-Seq MEX3C-ATP9B MEX3C chr18 48722937 - ATP9B chr18 77037054 + Exonic hg19 GBM TCGA-06-5413-01A 4 1 Out-of-frame Intra-chr q21.2 Seq+ 28667 ChimerSeq STARFusion TCGA_RNA-Seq TCHH-GFAP TCHH chr1 152084650 - GFAP chr17 42988823 - Exonic hg19 GBM TCGA-06-5413-01A 4 0 Out-of-frame Inter-chr q21.3 q21.31 28668 ChimerSeq STARFusion TCGA_RNA-Seq NR2F2-DCC NR2F2 chr15 96877832 + DCC chr18 50592416 + Exonic hg19 GBM TCGA-06-5413-01A 3 3 Out-of-frame Inter-chr q26.2 Transcription factor q21.2 Oncogene Tumor suppressor gene Seq+ 28669 ChimerSeq STARFusion TCGA_RNA-Seq RTTN-MAPK4 RTTN chr18 67866650 - MAPK4 chr18 48189459 + Exonic hg19 GBM TCGA-06-5413-01A 2 7 CDS-5'UTR Intra-chr q22.2 q21.1 Seq+ 28670 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 GBM TCGA-06-5413-01A 2 1 CDS-5'UTR Intra-chr q23 Seq+ 28671 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140770834 + ACPL2 chr3 140978965 + Exonic hg19 GBM TCGA-06-5413-01A 2 1 5'UTR-5'UTR Intra-chr q23 Seq+ 28672 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD13C-CRYZ ANKRD13C chr1 70781164 - CRYZ chr1 75185056 - Exonic hg19 GBM TCGA-06-5413-01A 2 0 In-Frame Intra-chr p31.1 p31.1 28673 ChimerSeq STARFusion TCGA_RNA-Seq FLJ31306-C14orf37 FLJ31306 chr14 58758353 - C14orf37 chr14 58606132 - Exonic hg19 GBM TCGA-06-5413-01A 2 0 3'UTR-5'UTR Intra-chr q23.1 Seq+ 28674 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-06-5413-01A 2 0 5'UTR-CDS Intra-chr q13 q13 28675 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-06-5413-01A 2 0 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28676 ChimerSeq STARFusion TCGA_RNA-Seq OPCML-NTM OPCML chr11 133402159 - NTM chr11 131781458 + Exonic hg19 GBM TCGA-06-5413-01A 2 0 In-Frame Intra-chr q25 Tumor suppressor gene q25 Seq+ 28677 ChimerSeq STARFusion TCGA_RNA-Seq PHOSPHO2-SSB PHOSPHO2 chr2 170554041 + SSB chr2 170657462 + Exonic hg19 GBM TCGA-06-5413-01A 2 0 5'UTR-5'UTR Intra-chr q31.1 q31.1 28678 ChimerSeq STARFusion TCGA_RNA-Seq RABEP2-UBA1 RABEP2 chr16 28931107 - UBA1 chrX 47069022 + Exonic hg19 GBM TCGA-06-5413-01A 2 0 In-Frame Inter-chr p11.2 p11.3 28679 ChimerSeq STARFusion TCGA_RNA-Seq TMEM241-APCDD1 TMEM241 chr18 20889644 - APCDD1 chr18 10468466 + Exonic hg19 GBM TCGA-06-5413-01A 2 0 Out-of-frame Intra-chr q11.2 p11.22 28680 ChimerSeq STARFusion TCGA_RNA-Seq ZNF136-AP1M1 ZNF136 chr19 12274021 + AP1M1 chr19 16337232 + Exonic hg19 GBM TCGA-06-5413-01A 2 0 In-Frame Intra-chr p13.2 Transcription factor p13.11 28681 ChimerSeq STARFusion TCGA_RNA-Seq MTERF-VOPP1 MTERF chr7 91509971 - VOPP1 chr7 55540738 - Exonic hg19 GBM TCGA-14-1823-01A 22 7 5'UTR-CDS Intra-chr p11.2 Seq+ 28682 ChimerSeq STARFusion TCGA_RNA-Seq MTERF-VOPP1 MTERF chr7 91509369 - VOPP1 chr7 55540738 - Exonic hg19 GBM TCGA-14-1823-01A 14 7 Out-of-frame Intra-chr p11.2 Seq+ 28683 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 GBM TCGA-14-1823-01A 4 0 CDS-5'UTR Intra-chr p12 p12 Transcription factor 28684 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-14-1823-01A 2 3 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 28685 ChimerSeq STARFusion TCGA_RNA-Seq C12orf23-UBAP2L C12orf23 chr12 107349843 + UBAP2L chr1 154197560 + Exonic hg19 GBM TCGA-14-1823-01A 2 0 5'UTR-5'UTR Inter-chr q21.3 28686 ChimerSeq STARFusion TCGA_RNA-Seq CNOT2-YLPM1 CNOT2 chr12 70637260 + YLPM1 chr14 75295916 + Exonic hg19 GBM TCGA-14-1823-01A 2 0 5'UTR-CDS Inter-chr q15 q24.3 Seq+ 28687 ChimerSeq STARFusion TCGA_RNA-Seq CPEB4-NRCAM CPEB4 chr5 173359503 + NRCAM chr7 107800937 - Exonic hg19 GBM TCGA-14-1823-01A 2 0 In-Frame Inter-chr q35.2 q31.1 Tumor suppressor gene 28688 ChimerSeq STARFusion TCGA_RNA-Seq LOC283692-IFT74 LOC283692 chr15 83318897 + IFT74 chr9 27055607 + Exonic hg19 GBM TCGA-14-1823-01A 2 0 5'UTR-CDS Inter-chr p21.2 28689 ChimerSeq STARFusion TCGA_RNA-Seq MOSPD2-GPM6B MOSPD2 chrX 14891880 + GPM6B chrX 13803927 - Exonic hg19 GBM TCGA-14-1823-01A 2 0 In-Frame Intra-chr p22.2 p22.2 28690 ChimerSeq STARFusion TCGA_RNA-Seq PLXNA4-EXOC4 PLXNA4 chr7 131982850 - EXOC4 chr7 133160082 + Exonic hg19 GBM TCGA-14-1823-01A 2 0 In-Frame Intra-chr q32.3 q33 28691 ChimerSeq STARFusion TCGA_RNA-Seq USP8-PSMD1 USP8 chr15 50716711 + PSMD1 chr2 232003450 + Exonic hg19 GBM TCGA-14-1823-01A 2 0 5'UTR-5'UTR Inter-chr q21.2 q37.1 28692 ChimerSeq STARFusion TCGA_RNA-Seq HUNK-SNRPD3 HUNK chr21 33246248 + SNRPD3 chr22 24953625 + Exonic hg19 GBM TCGA-32-2634-01A 5 1 CDS-5'UTR Inter-chr q22.11 CAMK:CAMKL q11.23 28693 ChimerSeq STARFusion TCGA_RNA-Seq OPCML-NTM OPCML chr11 133402159 - NTM chr11 131781458 + Exonic hg19 GBM TCGA-32-2634-01A 5 0 In-Frame Intra-chr q25 Tumor suppressor gene q25 Seq+ 28694 ChimerSeq STARFusion TCGA_RNA-Seq ZNF738-CHMP1A ZNF738 chr19 21558766 + CHMP1A chr16 89713739 - Exonic hg19 GBM TCGA-32-2634-01A 3 0 5'UTR-CDS Inter-chr p12 q24.3 Seq+ 28695 ChimerSeq STARFusion TCGA_RNA-Seq BDP1-BICD1 BDP1 chr5 70813279 + BICD1 chr12 32530474 + Exonic hg19 GBM TCGA-32-2634-01A 2 0 In-Frame Inter-chr p11.21 28696 ChimerSeq STARFusion TCGA_RNA-Seq DIRAS2-LOC340515 DIRAS2 chr9 93405034 - LOC340515 chr9 93271223 - Exonic hg19 GBM TCGA-32-2634-01A 2 0 5'UTR-3'UTR Intra-chr q22.2 28697 ChimerSeq STARFusion TCGA_RNA-Seq PSEN1-SEPT2 PSEN1 chr14 73614802 + SEPT2 chr2 242263631 + Exonic hg19 GBM TCGA-32-2634-01A 2 0 CDS-5'UTR Inter-chr q24.2 q37.3 28698 ChimerSeq STARFusion TCGA_RNA-Seq SMARCA4-KCTD3 SMARCA4 chr19 11114073 + KCTD3 chr1 215759838 + Exonic hg19 GBM TCGA-32-2634-01A 2 0 Out-of-frame Inter-chr p13.2 Oncogene Tumor suppressor gene q41 28699 ChimerSeq STARFusion TCGA_RNA-Seq TP53-RPLP0 TP53 chr17 7579312 - RPLP0 chr12 120635265 - Exonic hg19 GBM TCGA-32-2634-01A 2 0 In-Frame Inter-chr p13.1 Oncogene Tumor suppressor gene Transcription factor q24.23 28700 ChimerSeq STARFusion TCGA_RNA-Seq XRN2-TXLNG2P XRN2 chr20 21284111 + TXLNG2P chrY 21749096 + Exonic hg19 GBM TCGA-32-2634-01A 2 0 CDS-5'UTR Inter-chr p11.22 28701 ChimerSeq STARFusion TCGA_RNA-Seq ENTPD7-IDE ENTPD7 chr10 101439632 + IDE chr10 94250352 - Exonic hg19 GBM TCGA-06-2563-01A 7 11 In-Frame Intra-chr q24.2 q23.33 Seq+ 28702 ChimerSeq STARFusion TCGA_RNA-Seq HGS-TOP2A HGS chr17 79652719 + TOP2A chr17 38546416 - Exonic hg19 GBM TCGA-06-2563-01A 2 0 Out-of-frame Intra-chr q25.3 q21.2 28703 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-06-2563-01A 2 0 5'UTR-CDS Intra-chr q13 q13 28704 ChimerSeq STARFusion TCGA_RNA-Seq PDE8A-RBM39 PDE8A chr15 85669605 + RBM39 chr20 34326939 - Exonic hg19 GBM TCGA-06-2563-01A 2 0 In-Frame Inter-chr q25.3 q11.22 28705 ChimerSeq STARFusion TCGA_RNA-Seq PKNOX2-CEACAM22P PKNOX2 chr11 125105011 + CEACAM22P chr19 45047919 - Exonic hg19 GBM TCGA-06-2563-01A 2 0 5'UTR-3'UTR Inter-chr q24.2 Transcription factor q13.31 28706 ChimerSeq STARFusion TCGA_RNA-Seq TMEM138-TNRC18 TMEM138 chr11 61135470 + TNRC18 chr7 5353494 - Exonic hg19 GBM TCGA-06-2563-01A 2 0 In-Frame Inter-chr q12.2 p22.1 28707 ChimerSeq STARFusion TCGA_RNA-Seq PATL1-TECTA PATL1 chr11 59434326 - TECTA chr11 121058541 + Exonic hg19 GBM TCGA-26-5132-01A 128 46 Out-of-frame Intra-chr q12.1 q23.3 Seq+ 28708 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D15-LGR5 TBC1D15 chr12 72233591 + LGR5 chr12 71898394 + Exonic hg19 GBM TCGA-26-5132-01A 7 0 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 28709 ChimerSeq STARFusion TCGA_RNA-Seq PDZRN4-CPM PDZRN4 chr12 41949562 + CPM chr12 69326620 - Exonic hg19 GBM TCGA-26-5132-01A 4 6 CDS-5'UTR Intra-chr q12 q15 Seq+ 28710 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-26-5132-01A 4 0 5'UTR-CDS Intra-chr q13 q13 28711 ChimerSeq STARFusion TCGA_RNA-Seq MGAT1-FLT4 MGAT1 chr5 180235648 - FLT4 chr5 180058778 - Exonic hg19 GBM TCGA-06-1804-01A 26 15 5'UTR-CDS Intra-chr q35.3 q35.3 TK:VEGFR Oncogene Seq+ 28712 ChimerSeq STARFusion TCGA_RNA-Seq DIP2B-TMBIM6 DIP2B chr12 50899023 + TMBIM6 chr12 50146247 + Exonic hg19 GBM TCGA-06-1804-01A 24 12 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 28713 ChimerSeq STARFusion TCGA_RNA-Seq TDRD3-ESD TDRD3 chr13 61109367 + ESD chr13 47345631 - Exonic hg19 GBM TCGA-06-1804-01A 12 8 In-Frame Intra-chr q21.2 q14.2 Seq+ 28714 ChimerSeq STARFusion TCGA_RNA-Seq MGAT1-FLT4 MGAT1 chr5 180229680 - FLT4 chr5 180058778 - Exonic hg19 GBM TCGA-06-1804-01A 8 15 5'UTR-CDS Intra-chr q35.3 q35.3 TK:VEGFR Oncogene Seq+ 28715 ChimerSeq STARFusion TCGA_RNA-Seq MGAT1-FLT4 MGAT1 chr5 180235502 - FLT4 chr5 180058778 - Exonic hg19 GBM TCGA-06-1804-01A 6 15 5'UTR-CDS Intra-chr q35.3 q35.3 TK:VEGFR Oncogene Seq+ 28716 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A9-BCL2L13 SLC39A9 chr14 69908983 + BCL2L13 chr22 18138428 + Exonic hg19 GBM TCGA-06-1804-01A 8 6 CDS-5'UTR Inter-chr q24.1 q11.21 Seq+ 28717 ChimerSeq STARFusion TCGA_RNA-Seq ATG5-PDSS2 ATG5 chr6 106649847 - PDSS2 chr6 107475981 - Exonic hg19 GBM TCGA-06-1804-01A 5 7 Out-of-frame Intra-chr q21 q21 Tumor suppressor gene Seq+ 28718 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF9-LOC92249 ARHGEF9 chrX 63004996 - LOC92249 chrX 62652371 - Exonic hg19 GBM TCGA-06-1804-01A 5 4 CDS-3'UTR Intra-chr q11.2 28719 ChimerSeq STARFusion TCGA_RNA-Seq RAVER1-DOCK6 RAVER1 chr19 10439318 - DOCK6 chr19 11356554 - Exonic hg19 GBM TCGA-06-1804-01A 4 6 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 28720 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF9-LOC92249 ARHGEF9 chrX 63004996 - LOC92249 chrX 62736962 - Exonic hg19 GBM TCGA-06-1804-01A 3 4 CDS-3'UTR Intra-chr q11.2 28721 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-06-1804-01A 4 0 In-Frame Intra-chr q13 Tumor suppressor gene q13 28722 ChimerSeq STARFusion TCGA_RNA-Seq KRBOX1-FAM198A KRBOX1 chr3 42983563 + FAM198A chr3 43095013 + Exonic hg19 GBM TCGA-06-1804-01A 3 1 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 28723 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-06-1804-01A 2 1 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28724 ChimerSeq STARFusion TCGA_RNA-Seq HAL-LTA4H HAL chr12 96386458 - LTA4H chr12 96409472 - Exonic hg19 GBM TCGA-06-1804-01A 2 0 Out-of-frame Intra-chr q23.1 q23.1 28725 ChimerSeq STARFusion TCGA_RNA-Seq HIP1-SLC44A1 HIP1 chr7 75190633 - SLC44A1 chr9 108147703 + Exonic hg19 GBM TCGA-06-1804-01A 2 0 In-Frame Inter-chr q11.23 q31.1 28726 ChimerSeq STARFusion TCGA_RNA-Seq LOC645513-ANXA5 LOC645513 chr4 120384134 + ANXA5 chr4 122607527 - Exonic hg19 GBM TCGA-06-1804-01A 2 0 5'UTR-5'UTR Intra-chr q27 28727 ChimerSeq STARFusion TCGA_RNA-Seq MB21D2-FGF12 MB21D2 chr3 192635419 - FGF12 chr3 191888445 - Exonic hg19 GBM TCGA-06-1804-01A 2 0 Out-of-frame Intra-chr q29 q29 28728 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 GBM TCGA-06-1804-01A 2 0 CDS-5'UTR Intra-chr p12 p12 Transcription factor 28729 ChimerSeq STARFusion TCGA_RNA-Seq DYNC1LI1-GADL1 DYNC1LI1 chr3 32611838 - GADL1 chr3 30903257 - Exonic hg19 GBM TCGA-14-0790-01B 2 2 In-Frame Intra-chr p22.3 p23 Seq+ 28730 ChimerSeq STARFusion TCGA_RNA-Seq CUX1-DGKB CUX1 chr7 101671425 + DGKB chr7 14881075 - Exonic hg19 GBM TCGA-14-0790-01B 2 1 CDS-5'UTR Intra-chr q22.1 Tumor suppressor gene Transcription factor p21.2 Seq+ 28731 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-14-0790-01B 2 1 In-Frame Intra-chr q13 Tumor suppressor gene q13 28732 ChimerSeq STARFusion TCGA_RNA-Seq ADAM19-PITPNA ADAM19 chr5 156997903 - PITPNA chr17 1442246 - Exonic hg19 GBM TCGA-14-0790-01B 2 0 In-Frame Inter-chr q33.3 p13.3 28733 ChimerSeq STARFusion TCGA_RNA-Seq CCNK-VRK1 CCNK chr14 99947816 + VRK1 chr14 97299804 + Exonic hg19 GBM TCGA-14-0790-01B 2 0 5'UTR-5'UTR Intra-chr q32.2 q32.2 CK1:VRK 28734 ChimerSeq STARFusion TCGA_RNA-Seq ITCH-DYNLRB1 ITCH chr20 32981687 + DYNLRB1 chr20 33114073 + Exonic hg19 GBM TCGA-14-0790-01B 2 0 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 28735 ChimerSeq STARFusion TCGA_RNA-Seq KRT75-VIM KRT75 chr12 52822040 - VIM chr10 17277845 + Exonic hg19 GBM TCGA-14-0790-01B 2 0 In-Frame Inter-chr q13.13 p13 Tumor suppressor gene 28736 ChimerSeq STARFusion TCGA_RNA-Seq PRKCA-ATXN10 PRKCA chr17 64302245 + ATXN10 chr22 46125305 + Exonic hg19 GBM TCGA-14-0790-01B 2 0 Out-of-frame Inter-chr q24.2 q13.31 28737 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H18-CHMP1A ZC3H18 chr16 88636974 + CHMP1A chr16 89713739 - Exonic hg19 GBM TCGA-06-0210-02A 50 21 5'UTR-CDS Intra-chr q24.2 q24.3 Seq+ 28738 ChimerSeq STARFusion TCGA_RNA-Seq COA1-HECW1 COA1 chr7 43769028 - HECW1 chr7 43580762 + Exonic hg19 GBM TCGA-06-0210-02A 15 4 Out-of-frame Intra-chr p13 p14.1 Seq+ 28739 ChimerSeq STARFusion TCGA_RNA-Seq NFASC-PRELP NFASC chr1 204797910 + PRELP chr1 203452297 + Exonic hg19 GBM TCGA-06-0210-02A 8 8 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 28740 ChimerSeq STARFusion TCGA_RNA-Seq CHMP1A-SPIRE2 CHMP1A chr16 89715759 - SPIRE2 chr16 89924746 + Exonic hg19 GBM TCGA-06-0210-02A 3 2 In-Frame Intra-chr q24.3 q24.3 Seq+ 28741 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-06-0210-02A 3 0 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28742 ChimerSeq STARFusion TCGA_RNA-Seq NOVA1-CHMP1A NOVA1 chr14 26941526 - CHMP1A chr16 89713739 - Exonic hg19 GBM TCGA-06-0210-02A 2 1 In-Frame Inter-chr q12 q24.3 28743 ChimerSeq STARFusion TCGA_RNA-Seq ATP8A1-GLOD4 ATP8A1 chr4 42602495 - GLOD4 chr17 681984 - Exonic hg19 GBM TCGA-06-0210-02A 2 0 In-Frame Inter-chr p13 p13.3 28744 ChimerSeq STARFusion TCGA_RNA-Seq MT1IP-MT3 MT1IP chr16 56711026 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-32-2632-01A 3 0 5'UTR-CDS Intra-chr q13 28745 ChimerSeq STARFusion TCGA_RNA-Seq PIPSL-PSMD4 PIPSL chr10 95719391 - PSMD4 chr1 151236471 + Exonic hg19 GBM TCGA-32-2632-01A 3 0 Out-of-frame Inter-chr q23.33 q21.3 28746 ChimerSeq STARFusion TCGA_RNA-Seq PARK7-GNB1 PARK7 chr1 8022935 + GNB1 chr1 1749314 - Exonic hg19 GBM TCGA-32-2632-01A 2 0 In-Frame Intra-chr p36.23 Tumor suppressor gene p36.33 28747 ChimerSeq STARFusion TCGA_RNA-Seq SSR1-DMD SSR1 chr6 7310150 - DMD chrX 32328393 - Exonic hg19 GBM TCGA-06-2569-01A 48 20 In-Frame Inter-chr p24.3 p21.1 Tumor suppressor gene Seq+ 28748 ChimerSeq STARFusion TCGA_RNA-Seq WDR59-ASB9 WDR59 chr16 74942806 - ASB9 chrX 15272966 - Exonic hg19 GBM TCGA-06-2569-01A 13 3 Out-of-frame Inter-chr q23.1 p22.2 Seq+ 28749 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF1-LOC100996307 ZNRF1 chr16 75033993 + LOC100996307 chr19 43155239 + Exonic hg19 GBM TCGA-06-2569-01A 10 7 Out-of-frame Inter-chr q23.1 28750 ChimerSeq STARFusion TCGA_RNA-Seq COX14-GPD1 COX14 chr12 50506084 + GPD1 chr12 50500588 + Exonic hg19 GBM TCGA-06-2569-01A 9 0 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 28751 ChimerSeq STARFusion TCGA_RNA-Seq MET-CAV1 MET chr7 116340338 + CAV1 chr7 116199000 + Exonic hg19 GBM TCGA-06-2569-01A 6 0 In-Frame Intra-chr q31.2 TK:Met Oncogene q31.2 Tumor suppressor gene Seq+ 28752 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-FLJ44635 TPT1 chr13 45914277 - FLJ44635 chrX 71379785 + Exonic hg19 GBM TCGA-06-2569-01A 3 1 Out-of-frame Inter-chr q14.13 28753 ChimerSeq STARFusion TCGA_RNA-Seq CHD2-LOC100507217 CHD2 chr15 93444529 + LOC100507217 chr15 93428745 + Exonic hg19 GBM TCGA-06-2569-01A 3 0 CDS-5'UTR Intra-chr q26.1 28754 ChimerSeq STARFusion TCGA_RNA-Seq PLAC9-LOC389033 PLAC9 chr10 81904014 + LOC389033 chr2 130681254 - Exonic hg19 GBM TCGA-06-2569-01A 3 0 CDS-3'UTR Inter-chr q22.3 28755 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 GBM TCGA-06-2569-01A 2 2 CDS-5'UTR Intra-chr p12 p12 Transcription factor 28756 ChimerSeq STARFusion TCGA_RNA-Seq GLTSCR2-DHX34 GLTSCR2 chr19 48249040 + DHX34 chr19 47885237 + Exonic hg19 GBM TCGA-06-2569-01A 2 1 Out-of-frame Intra-chr Tumor suppressor gene q13.32 28757 ChimerSeq STARFusion TCGA_RNA-Seq FRG1-LOC283788 FRG1 chr4 190883087 + LOC283788 chrUn_gl000219 58989 - Exonic hg19 GBM TCGA-06-2569-01A 2 0 CDS-3'UTR Inter-chr 28758 ChimerSeq STARFusion TCGA_RNA-Seq NPEPPS-MRPL45P2 NPEPPS chr17 45656877 + MRPL45P2 chr17 45534159 - Exonic hg19 GBM TCGA-06-2569-01A 2 0 CDS-3'UTR Intra-chr q21.32 q21.32 28759 ChimerSeq STARFusion TCGA_RNA-Seq SOCS5-TTC7A SOCS5 chr2 46926588 + TTC7A chr2 47177502 + Exonic hg19 GBM TCGA-06-2569-01A 2 0 5'UTR-CDS Intra-chr p21 p21 28760 ChimerSeq STARFusion TCGA_RNA-Seq AAK1-YIPF1 AAK1 chr2 69870010 - YIPF1 chr1 54325826 - Exonic hg19 GBM TCGA-28-5213-01A 5 0 Out-of-frame Inter-chr p13.3 Other:NAK p32.3 Seq+ 28761 ChimerSeq STARFusion TCGA_RNA-Seq CPSF4-DTYMK CPSF4 chr7 99051759 + DTYMK chr2 242615652 - Exonic hg19 GBM TCGA-28-5213-01A 2 0 In-Frame Inter-chr q22.1 q37.3 28762 ChimerSeq STARFusion TCGA_RNA-Seq RAB6B-RBP1 RAB6B chr3 133583428 - RBP1 chr3 139237364 - Exonic hg19 GBM TCGA-28-5213-01A 2 0 In-Frame Intra-chr q22.1 q23 Tumor suppressor gene 28763 ChimerSeq STARFusion TCGA_RNA-Seq KDM4B-SNTG1 KDM4B chr19 5047680 + SNTG1 chr8 51085121 + Exonic hg19 GBM TCGA-06-2570-01A 6 2 CDS-5'UTR Inter-chr p13.3 q11.21 Seq+ 28764 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-06-2570-01A 6 2 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28765 ChimerSeq STARFusion TCGA_RNA-Seq LOC100505876-TAF7L LOC100505876 chr2 37428869 + TAF7L chrX 100530269 - Exonic hg19 GBM TCGA-06-2570-01A 2 4 5'UTR-CDS Inter-chr q22.1 28766 ChimerSeq STARFusion TCGA_RNA-Seq PDLIM5-TIMM23 PDLIM5 chr4 95376535 + TIMM23 chr10 51613311 - Exonic hg19 GBM TCGA-06-2570-01A 2 0 In-Frame Inter-chr q22.3 q11.22 Seq+ 28767 ChimerSeq STARFusion TCGA_RNA-Seq PTPRT-ADD1 PTPRT chr20 41514447 - ADD1 chr4 2877623 + Exonic hg19 GBM TCGA-06-2570-01A 2 0 CDS-5'UTR Inter-chr q13.11 Oncogene Tumor suppressor gene p16.3 28768 ChimerSeq STARFusion TCGA_RNA-Seq RBM14-C11orf80 RBM14 chr11 66384528 + C11orf80 chr11 66526514 + Exonic hg19 GBM TCGA-06-2570-01A 2 0 In-Frame Intra-chr q13.2 Tumor suppressor gene q13.2 28769 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-NPLOC4 RPS6KB1 chr17 58013902 + NPLOC4 chr17 79526442 - Exonic hg19 GBM TCGA-06-2570-01A 2 0 Out-of-frame Intra-chr q23.1 Oncogene q25.3 28770 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-PTPRZ1 TAOK1 chr17 27778698 + PTPRZ1 chr7 121668606 + Exonic hg19 GBM TCGA-06-2570-01A 2 0 Out-of-frame Inter-chr q11.2 q31.32 28771 ChimerSeq STARFusion TCGA_RNA-Seq NFASC-PRELP NFASC chr1 204797910 + PRELP chr1 203452297 + Exonic hg19 GBM TCGA-06-0210-01A 94 61 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 28772 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H18-CHMP1A ZC3H18 chr16 88636974 + CHMP1A chr16 89713739 - Exonic hg19 GBM TCGA-06-0210-01A 39 22 5'UTR-CDS Intra-chr q24.2 q24.3 Seq+ 28773 ChimerSeq STARFusion TCGA_RNA-Seq COA1-HECW1 COA1 chr7 43769028 - HECW1 chr7 43580762 + Exonic hg19 GBM TCGA-06-0210-01A 22 9 Out-of-frame Intra-chr p13 p14.1 Seq+ 28774 ChimerSeq STARFusion TCGA_RNA-Seq CHMP1A-SPIRE2 CHMP1A chr16 89715759 - SPIRE2 chr16 89924746 + Exonic hg19 GBM TCGA-06-0210-01A 10 4 In-Frame Intra-chr q24.3 q24.3 Seq+ 28775 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-06-0210-01A 2 5 In-Frame Intra-chr q13 Tumor suppressor gene q13 28776 ChimerSeq STARFusion TCGA_RNA-Seq CDYL-DLEU2 CDYL chr6 4892613 + DLEU2 chr13 50601542 - Exonic hg19 GBM TCGA-06-0210-01A 3 0 CDS-3'UTR Inter-chr p25.1 q14.2 Tumor suppressor gene 28777 ChimerSeq STARFusion TCGA_RNA-Seq ZNF800-GRM8 ZNF800 chr7 127031551 - GRM8 chr7 126883569 - Exonic hg19 GBM TCGA-06-0210-01A 2 1 CDS-5'UTR Intra-chr q31.33 Transcription factor q31.33 Oncogene 28778 ChimerSeq STARFusion TCGA_RNA-Seq EEPD1-ANLN EEPD1 chr7 36327386 + ANLN chr7 36435875 + Exonic hg19 GBM TCGA-06-0210-01A 2 0 Out-of-frame Intra-chr p14.2 p14.2 28779 ChimerSeq STARFusion TCGA_RNA-Seq SUB1-NPR3 SUB1 chr5 32591791 + NPR3 chr5 32724804 + Exonic hg19 GBM TCGA-06-0210-01A 2 0 Out-of-frame Intra-chr p13.3 p13.3 28780 ChimerSeq STARFusion TCGA_RNA-Seq AGAP2-CYP27B1 AGAP2 chr12 58127809 - CYP27B1 chr12 58159980 - Exonic hg19 GBM TCGA-12-1597-01B 91 64 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 28781 ChimerSeq STARFusion TCGA_RNA-Seq NFASC-RTN3 NFASC chr1 204951148 + RTN3 chr11 63525628 + Exonic hg19 GBM TCGA-12-1597-01B 51 41 Out-of-frame Inter-chr q32.1 q13.1 Seq+ 28782 ChimerSeq STARFusion TCGA_RNA-Seq CTNND2-ID1 CTNND2 chr5 11397143 - ID1 chr20 30193175 + Exonic hg19 GBM TCGA-12-1597-01B 9 0 CDS-5'UTR Inter-chr p15.2 q11.21 28783 ChimerSeq STARFusion TCGA_RNA-Seq CDC25A-SCN10A CDC25A chr3 48226143 - SCN10A chr3 38748870 - Exonic hg19 GBM TCGA-12-1597-01B 8 3 Out-of-frame Intra-chr p21.31 p22.2 28784 ChimerSeq STARFusion TCGA_RNA-Seq NFASC-GLYR1 NFASC chr1 204889868 + GLYR1 chr16 4896211 - Exonic hg19 GBM TCGA-12-1597-01B 8 3 5'UTR-CDS Inter-chr q32.1 p13.3 Transcription factor 28785 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-12-1597-01B 4 1 In-Frame Intra-chr q13 Tumor suppressor gene q13 28786 ChimerSeq STARFusion TCGA_RNA-Seq LOC100507266-MSX1 LOC100507266 chr4 4651269 + MSX1 chr4 4864428 + Exonic hg19 GBM TCGA-12-1597-01B 4 0 5'UTR-CDS Intra-chr p16.2 Transcription factor 28787 ChimerSeq STARFusion TCGA_RNA-Seq MT1A-MT3 MT1A chr16 56673192 + MT3 chr16 56623447 + Exonic hg19 GBM TCGA-12-1597-01B 4 0 Out-of-frame Intra-chr q13 q13 28788 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-TSPAN31 CTDSP2 chr12 58240155 - TSPAN31 chr12 58140372 + Exonic hg19 GBM TCGA-12-1597-01B 3 1 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 28789 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-12-1597-01B 3 0 5'UTR-CDS Intra-chr q13 q13 28790 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-12-1597-01B 2 2 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28791 ChimerSeq STARFusion TCGA_RNA-Seq AARS-COG4 AARS chr16 70301562 - COG4 chr16 70524295 - Exonic hg19 GBM TCGA-12-1597-01B 2 1 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 28792 ChimerSeq STARFusion TCGA_RNA-Seq GATS-PILRB GATS chr7 99820220 - PILRB chr7 99952766 + Exonic hg19 GBM TCGA-12-1597-01B 2 0 3'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 28793 ChimerSeq STARFusion TCGA_RNA-Seq NECAP1-CNIH4 NECAP1 chr12 8242895 + CNIH4 chr1 224553581 + Exonic hg19 GBM TCGA-12-1597-01B 2 0 Out-of-frame Inter-chr p13.31 q42.11 28794 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A13-MBD2 SLC25A13 chr7 95951254 - MBD2 chr18 51692536 - Exonic hg19 GBM TCGA-12-1597-01B 2 0 In-Frame Inter-chr q21.3 q21.2 Transcription factor 28795 ChimerSeq STARFusion TCGA_RNA-Seq ZNF589-FBXW12 ZNF589 chr3 48302429 + FBXW12 chr3 48415038 + Exonic hg19 GBM TCGA-12-1597-01B 2 0 Out-of-frame Intra-chr p21.31 Transcription factor p21.31 Seq+ 28796 ChimerSeq STARFusion TCGA_RNA-Seq MED15-COMT MED15 chr22 20891491 + COMT chr22 19948722 + Exonic hg19 GBM TCGA-32-2638-01A 7 10 CDS-5'UTR Intra-chr q11.21 q11.21 Seq+ 28797 ChimerSeq STARFusion TCGA_RNA-Seq CAMTA1-ENO1 CAMTA1 chr1 6885270 + ENO1 chr1 8934976 - Exonic hg19 GBM TCGA-32-2638-01A 7 3 5'UTR-5'UTR Intra-chr p36.31 Tumor suppressor gene Transcription factor p36.23 28798 ChimerSeq STARFusion TCGA_RNA-Seq ZNF713-COBL ZNF713 chr7 55991392 + COBL chr7 51153001 - Exonic hg19 GBM TCGA-32-2638-01A 3 2 Out-of-frame Intra-chr p11.2 Transcription factor p12.1 28799 ChimerSeq STARFusion TCGA_RNA-Seq CAMTA1-ENO1 CAMTA1 chr1 6931900 + ENO1 chr1 8934976 - Exonic hg19 GBM TCGA-32-2638-01A 2 3 5'UTR-5'UTR Intra-chr p36.31 Tumor suppressor gene Transcription factor p36.23 28800 ChimerSeq STARFusion TCGA_RNA-Seq RASSF8-SSPN RASSF8 chr12 26208379 + SSPN chr12 26377226 + Exonic hg19 GBM TCGA-32-2638-01A 2 1 Out-of-frame Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 28801 ChimerSeq STARFusion TCGA_RNA-Seq GLB1-ARHGEF3 GLB1 chr3 33138503 - ARHGEF3 chr3 57069204 - Exonic hg19 GBM TCGA-32-2638-01A 2 0 CDS-5'UTR Intra-chr p22.3 p14.3 28802 ChimerSeq STARFusion TCGA_RNA-Seq HRH1-ATG7 HRH1 chr3 11196240 + ATG7 chr3 11340160 + Exonic hg19 GBM TCGA-32-2638-01A 2 0 5'UTR-5'UTR Intra-chr p25.3 p25.3 Seq+ 28803 ChimerSeq STARFusion TCGA_RNA-Seq RB1CC1-PHC3 RB1CC1 chr8 53626635 - PHC3 chr3 169896726 - Exonic hg19 GBM TCGA-32-2638-01A 2 0 5'UTR-CDS Inter-chr q11.23 Tumor suppressor gene q26.2 Tumor suppressor gene 28804 ChimerSeq STARFusion TCGA_RNA-Seq RPL37A-IGFBP2 RPL37A chr2 217364754 + IGFBP2 chr2 217525280 + Exonic hg19 GBM TCGA-32-2638-01A 2 0 Out-of-frame Intra-chr q35 q35 28805 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 GBM TCGA-32-2638-01A 2 0 CDS-5'UTR Intra-chr p12 p12 Transcription factor 28806 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55268106 + SEPT14 chr7 55863785 - Exonic hg19 GBM TCGA-06-0750-01A 197 49 In-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 28807 ChimerSeq STARFusion TCGA_RNA-Seq KLHDC8A-GPR37L1 KLHDC8A chr1 205305928 - GPR37L1 chr1 202096868 + Exonic hg19 GBM TCGA-06-0750-01A 3 6 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 28808 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-06-0750-01A 2 3 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28809 ChimerSeq STARFusion TCGA_RNA-Seq TXNDC11-LITAF TXNDC11 chr16 11815433 - LITAF chr16 11650591 - Exonic hg19 GBM TCGA-19-4065-02A 2 1 CDS-5'UTR Intra-chr p13.13 p13.13 Tumor suppressor gene 28810 ChimerSeq STARFusion TCGA_RNA-Seq KANSL2-LAMC3 KANSL2 chr12 49062889 - LAMC3 chr9 133954536 + Exonic hg19 GBM TCGA-19-4065-02A 2 0 In-Frame Inter-chr q13.11 q34.12 28811 ChimerSeq STARFusion TCGA_RNA-Seq RNF165-ADAM10 RNF165 chr18 43914298 + ADAM10 chr15 58957396 - Exonic hg19 GBM TCGA-19-4065-02A 2 0 CDS-3'UTR Inter-chr q21.1 q21.3 28812 ChimerSeq STARFusion TCGA_RNA-Seq PSMD1-DNER PSMD1 chr2 231945028 + DNER chr2 230377652 - Exonic hg19 GBM TCGA-27-1830-01A 14 9 In-Frame Intra-chr q37.1 q36.3 Seq+ 28813 ChimerSeq STARFusion TCGA_RNA-Seq PIGG-SPINK2 PIGG chr4 502759 + SPINK2 chr4 57676350 - Exonic hg19 GBM TCGA-27-1830-01A 9 8 Out-of-frame Intra-chr p16.3 q12 Seq+ 28814 ChimerSeq STARFusion TCGA_RNA-Seq ANK2-ARHGAP10 ANK2 chr4 113970968 + ARHGAP10 chr4 148944414 + Exonic hg19 GBM TCGA-27-1830-01A 5 13 In-Frame Intra-chr q25 q31.23 Seq+ 28815 ChimerSeq STARFusion TCGA_RNA-Seq ANK2-ARHGAP10 ANK2 chr4 113825670 + ARHGAP10 chr4 148944414 + Exonic hg19 GBM TCGA-27-1830-01A 3 13 In-Frame Intra-chr q25 q31.23 Seq+ 28816 ChimerSeq STARFusion TCGA_RNA-Seq MVB12B-RPL18 MVB12B chr9 129268028 + RPL18 chr19 49119461 - Exonic hg19 GBM TCGA-27-1830-01A 3 0 Out-of-frame Inter-chr q33.3 q13.33 28817 ChimerSeq STARFusion TCGA_RNA-Seq DANCR-TIMMDC1 DANCR chr4 53579126 + TIMMDC1 chr3 119219542 + Exonic hg19 GBM TCGA-27-1830-01A 2 0 5'UTR-CDS Inter-chr q12 q13.33 Seq+ 28818 ChimerSeq STARFusion TCGA_RNA-Seq GUSBP1-ANKLE2 GUSBP1 chr5 21461975 + ANKLE2 chr12 133331719 - Exonic hg19 GBM TCGA-27-1830-01A 2 0 5'UTR-CDS Inter-chr p14.3 q24.33 28819 ChimerSeq STARFusion TCGA_RNA-Seq HSPA5-TFAM HSPA5 chr9 128000420 - TFAM chr10 60147950 + Exonic hg19 GBM TCGA-27-1830-01A 2 0 In-Frame Inter-chr q33.3 q21.1 28820 ChimerSeq STARFusion TCGA_RNA-Seq KRT77-VIM KRT77 chr12 53086205 - VIM chr10 17277845 + Exonic hg19 GBM TCGA-27-1830-01A 2 0 In-Frame Inter-chr q13.13 p13 Tumor suppressor gene 28821 ChimerSeq STARFusion TCGA_RNA-Seq PHEX-ADCY8 PHEX chrX 22186506 + ADCY8 chr8 132002788 - Exonic hg19 GBM TCGA-27-1830-01A 2 0 CDS-5'UTR Inter-chr p22.11 q24.22 28822 ChimerSeq STARFusion TCGA_RNA-Seq PLAT-VDAC3 PLAT chr8 42036415 - VDAC3 chr8 42256230 + Exonic hg19 GBM TCGA-27-1830-01A 2 0 In-Frame Intra-chr p11.21 p11.21 28823 ChimerSeq STARFusion TCGA_RNA-Seq SGCD-SYNPO SGCD chr5 156022061 + SYNPO chr5 150027506 + Exonic hg19 GBM TCGA-27-1830-01A 2 0 In-Frame Intra-chr q33.2 q33.1 28824 ChimerSeq STARFusion TCGA_RNA-Seq SLC35G2-RBBP6 SLC35G2 chr3 136538470 + RBBP6 chr16 24566936 + Exonic hg19 GBM TCGA-27-1830-01A 2 0 5'UTR-CDS Inter-chr q22.3 p12.1 28825 ChimerSeq STARFusion TCGA_RNA-Seq ZDBF2-ADAM23 ZDBF2 chr2 207146633 + ADAM23 chr2 207452049 + Exonic hg19 GBM TCGA-27-1830-01A 2 0 In-Frame Intra-chr q33.3 28826 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1E-DDX17 CSNK1E chr22 38690410 - DDX17 chr22 38881123 - Exonic hg19 GBM TCGA-06-2565-01A 161 79 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 28827 ChimerSeq STARFusion TCGA_RNA-Seq KIF1B-EPB41 KIF1B chr1 10384120 + EPB41 chr1 29313943 + Exonic hg19 GBM TCGA-06-2565-01A 22 18 CDS-5'UTR Intra-chr p36.22 Tumor suppressor gene p35.3 Tumor suppressor gene Seq+ 28828 ChimerSeq STARFusion TCGA_RNA-Seq KIF1B-EPB41 KIF1B chr1 10381915 + EPB41 chr1 29313943 + Exonic hg19 GBM TCGA-06-2565-01A 8 18 CDS-5'UTR Intra-chr p36.22 Tumor suppressor gene p35.3 Tumor suppressor gene Seq+ 28829 ChimerSeq STARFusion TCGA_RNA-Seq SKI-SSU72 SKI chr1 2161174 + SSU72 chr1 1500296 - Exonic hg19 GBM TCGA-06-2565-01A 8 13 Out-of-frame Intra-chr p36.33 Transcription factor p36.33 Seq+ 28830 ChimerSeq STARFusion TCGA_RNA-Seq CLIC4-SRRM1 CLIC4 chr1 25140710 + SRRM1 chr1 24972475 + Exonic hg19 GBM TCGA-06-2565-01A 9 5 Out-of-frame Intra-chr p36.11 p36.11 Seq+ 28831 ChimerSeq STARFusion TCGA_RNA-Seq C22orf39-FAM192A C22orf39 chr22 19434901 - FAM192A chr16 57207781 - Exonic hg19 GBM TCGA-06-2565-01A 2 0 CDS-5'UTR Inter-chr q11.21 q13 28832 ChimerSeq STARFusion TCGA_RNA-Seq DOK5-FASTKD1 DOK5 chr20 53205345 + FASTKD1 chr2 170393850 - Exonic hg19 GBM TCGA-06-2565-01A 2 0 In-Frame Inter-chr q13.2 q31.1 28833 ChimerSeq STARFusion TCGA_RNA-Seq FGF14-PDGFC FGF14 chr13 102527536 - PDGFC chr4 157694045 - Exonic hg19 GBM TCGA-06-2565-01A 2 0 Out-of-frame Inter-chr q33.1 q32.1 28834 ChimerSeq STARFusion TCGA_RNA-Seq LOC100507266-MSX1 LOC100507266 chr4 4651269 + MSX1 chr4 4864428 + Exonic hg19 GBM TCGA-06-2565-01A 2 0 5'UTR-CDS Intra-chr p16.2 Transcription factor 28835 ChimerSeq STARFusion TCGA_RNA-Seq NDST1-SBDSP1 NDST1 chr5 149925048 + SBDSP1 chr7 72301272 + Exonic hg19 GBM TCGA-06-2565-01A 2 0 CDS-5'UTR Inter-chr q33.1 q11.23 28836 ChimerSeq STARFusion TCGA_RNA-Seq RPL36A-MEG3 RPL36A chrX 100646552 + MEG3 chr14 101302073 + Exonic hg19 GBM TCGA-06-2565-01A 2 0 CDS-5'UTR Inter-chr q22.1 q32.2 Tumor suppressor gene 28837 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 GBM TCGA-06-2565-01A 2 0 CDS-5'UTR Intra-chr q23 Seq+ 28838 ChimerSeq STARFusion TCGA_RNA-Seq TMSB15A-H2BFXP TMSB15A chrX 101769992 - H2BFXP chrX 103316442 - Exonic hg19 GBM TCGA-06-2565-01A 2 0 CDS-3'UTR Intra-chr q22.1 28839 ChimerSeq STARFusion TCGA_RNA-Seq SRM-SMEK1 SRM chr1 11118857 - SMEK1 chr14 91957146 - Exonic hg19 GBM TCGA-08-0386-01A 11 7 Out-of-frame Inter-chr p36.22 TK:Src Seq+ 28840 ChimerSeq STARFusion TCGA_RNA-Seq CFL1P1-LOC643529 CFL1P1 chr10 89578797 + LOC643529 chr10 91596975 + Exonic hg19 GBM TCGA-08-0386-01A 3 0 5'UTR-5'UTR Intra-chr 28841 ChimerSeq STARFusion TCGA_RNA-Seq NNMT-RBM7 NNMT chr11 114168880 + RBM7 chr11 114272420 + Exonic hg19 GBM TCGA-08-0386-01A 2 0 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 28842 ChimerSeq STARFusion TCGA_RNA-Seq PHOSPHO2-SSB PHOSPHO2 chr2 170554041 + SSB chr2 170657462 + Exonic hg19 GBM TCGA-08-0386-01A 2 0 5'UTR-5'UTR Intra-chr q31.1 q31.1 28843 ChimerSeq STARFusion TCGA_RNA-Seq SMYD3-HNRNPU SMYD3 chr1 246670356 - HNRNPU chr1 245025836 - Exonic hg19 GBM TCGA-08-0386-01A 2 0 In-Frame Intra-chr q44 Transcription factor q44 28844 ChimerSeq STARFusion TCGA_RNA-Seq ANP32B-SEPT7 ANP32B chr9 100777729 + SEPT7 chr7 35922140 + Exonic hg19 GBM TCGA-32-2616-01A 3 0 Out-of-frame Inter-chr q22.33 p14.2 28845 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-MAP1LC3B RNA45S5 chrUn_gl000220 115492 + MAP1LC3B chr16 87426015 + Exonic hg19 GBM TCGA-32-2616-01A 3 0 Out-of-frame Inter-chr q24.2 28846 ChimerSeq STARFusion TCGA_RNA-Seq DLG2-CBR1 DLG2 chr11 84245613 - CBR1 chr21 37443248 + Exonic hg19 GBM TCGA-32-2616-01A 2 0 Out-of-frame Inter-chr q14.1 q22.12 28847 ChimerSeq STARFusion TCGA_RNA-Seq FRG1-LOC283788 FRG1 chr4 190883087 + LOC283788 chrUn_gl000219 58989 - Exonic hg19 GBM TCGA-32-2616-01A 2 0 CDS-3'UTR Inter-chr 28848 ChimerSeq STARFusion TCGA_RNA-Seq KRT80-VIM KRT80 chr12 52565982 - VIM chr10 17277845 + Exonic hg19 GBM TCGA-32-2616-01A 2 0 In-Frame Inter-chr q13.13 p13 Tumor suppressor gene 28849 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-32-2616-01A 2 0 5'UTR-CDS Intra-chr q13 q13 28850 ChimerSeq STARFusion TCGA_RNA-Seq JAGN1-ZC3H4 JAGN1 chr3 9934710 + ZC3H4 chr19 47589795 - Exonic hg19 GBM TCGA-14-0817-01A 7 6 In-Frame Inter-chr p25.3 q13.32 Seq+ 28851 ChimerSeq STARFusion TCGA_RNA-Seq FMNL3-TUBA1B FMNL3 chr12 50100838 - TUBA1B chr12 49523505 - Exonic hg19 GBM TCGA-14-0817-01A 6 2 In-Frame Intra-chr q13.12 q13.12 Seq+ 28852 ChimerSeq STARFusion TCGA_RNA-Seq FMNL3-TUBA1A FMNL3 chr12 50100838 - TUBA1A chr12 49580616 - Exonic hg19 GBM TCGA-14-0817-01A 5 5 In-Frame Intra-chr q13.12 q13.12 28853 ChimerSeq STARFusion TCGA_RNA-Seq CSDE1-TRIM33 CSDE1 chr1 115292442 - TRIM33 chr1 115007010 - Exonic hg19 GBM TCGA-14-0817-01A 2 1 5'UTR-CDS Intra-chr p13.2 p13.2 Oncogene 28854 ChimerSeq STARFusion TCGA_RNA-Seq KRBOX1-FAM198A KRBOX1 chr3 42983563 + FAM198A chr3 43095013 + Exonic hg19 GBM TCGA-14-0817-01A 2 1 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 28855 ChimerSeq STARFusion TCGA_RNA-Seq B3GALTL-MPHOSPH8 B3GALTL chr13 31803431 + MPHOSPH8 chr13 20216255 + Exonic hg19 GBM TCGA-14-0817-01A 2 0 In-Frame Intra-chr q12.11 28856 ChimerSeq STARFusion TCGA_RNA-Seq BAI3-LMBRD1 BAI3 chr6 69349324 + LMBRD1 chr6 70386433 - Exonic hg19 GBM TCGA-14-0817-01A 2 0 In-Frame Intra-chr q13 28857 ChimerSeq STARFusion TCGA_RNA-Seq CALCRL-SLC5A4 CALCRL chr2 188312766 - SLC5A4 chr22 32647861 - Exonic hg19 GBM TCGA-14-0817-01A 2 0 5'UTR-CDS Inter-chr q32.1 q12.3 28858 ChimerSeq STARFusion TCGA_RNA-Seq CASP2-GLTSCR2 CASP2 chr7 142989791 + GLTSCR2 chr19 48259785 + Exonic hg19 GBM TCGA-14-0817-01A 2 0 Out-of-frame Inter-chr q34 Tumor suppressor gene Tumor suppressor gene 28859 ChimerSeq STARFusion TCGA_RNA-Seq COPA-YPEL3 COPA chr1 160309699 - YPEL3 chr16 30104120 - Exonic hg19 GBM TCGA-14-0817-01A 2 0 In-Frame Inter-chr q23.2 p11.2 Tumor suppressor gene 28860 ChimerSeq STARFusion TCGA_RNA-Seq FAM108C1-MTHFS FAM108C1 chr15 80988360 + MTHFS chr15 80181696 - Exonic hg19 GBM TCGA-14-0817-01A 2 0 Out-of-frame Intra-chr q25.1 28861 ChimerSeq STARFusion TCGA_RNA-Seq GNPTAB-CCDC53 GNPTAB chr12 102224337 - CCDC53 chr12 102439897 - Exonic hg19 GBM TCGA-14-0817-01A 2 0 In-Frame Intra-chr q23.2 28862 ChimerSeq STARFusion TCGA_RNA-Seq HRH1-ATG7 HRH1 chr3 11196240 + ATG7 chr3 11340160 + Exonic hg19 GBM TCGA-14-0817-01A 2 0 5'UTR-5'UTR Intra-chr p25.3 p25.3 Seq+ 28863 ChimerSeq STARFusion TCGA_RNA-Seq MED31-CHMP1A MED31 chr17 6553676 - CHMP1A chr16 89713739 - Exonic hg19 GBM TCGA-14-0817-01A 2 0 In-Frame Inter-chr p13.1 q24.3 28864 ChimerSeq STARFusion TCGA_RNA-Seq MORF4L2-ATRX MORF4L2 chrX 102940099 - ATRX chrX 76764107 - Exonic hg19 GBM TCGA-14-0817-01A 2 0 5'UTR-CDS Intra-chr q22.2 q21.1 Oncogene 28865 ChimerSeq STARFusion TCGA_RNA-Seq PDE4B-ITGB3BP PDE4B chr1 66458825 + ITGB3BP chr1 63974241 - Exonic hg19 GBM TCGA-14-0817-01A 2 0 In-Frame Intra-chr p31.3 p31.3 28866 ChimerSeq STARFusion TCGA_RNA-Seq TAPT1-YWHAE TAPT1 chr4 16227882 - YWHAE chr17 1248793 - Exonic hg19 GBM TCGA-14-0817-01A 2 0 In-Frame Inter-chr p15.32 p13.3 28867 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-GAP43 ZBTB20 chr3 114219199 - GAP43 chr3 115439641 + Exonic hg19 GBM TCGA-14-0817-01A 2 0 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.31 28868 ChimerSeq STARFusion TCGA_RNA-Seq RREB1-EEF1E1 RREB1 chr6 7108293 + EEF1E1 chr6 8097700 - Exonic hg19 GBM TCGA-06-5412-01A 7 7 5'UTR-CDS Intra-chr p24.3 Transcription factor p24.3 Tumor suppressor gene Seq+ 28869 ChimerSeq STARFusion TCGA_RNA-Seq CDC5L-PAQR8 CDC5L chr6 44376369 + PAQR8 chr6 52267960 + Exonic hg19 GBM TCGA-06-5412-01A 6 9 5'UTR-5'UTR Intra-chr p21.1 Transcription factor p12.2 Seq+ 28870 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-06-5412-01A 8 0 5'UTR-CDS Intra-chr q13 q13 28871 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642595 + MT3 chr16 56623782 + Exonic hg19 GBM TCGA-06-5412-01A 2 14 In-Frame Intra-chr q13 Tumor suppressor gene q13 28872 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86193515 + CA3 chr8 86351941 + Exonic hg19 GBM TCGA-06-5412-01A 3 1 Out-of-frame Intra-chr q21.2 q21.2 28873 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT2A MT1L chr16 56652570 + MT2A chr16 56643206 + Exonic hg19 GBM TCGA-06-5412-01A 3 1 Out-of-frame Intra-chr q13 q13 Tumor suppressor gene 28874 ChimerSeq STARFusion TCGA_RNA-Seq MT1H-MT2A MT1H chr16 56704879 + MT2A chr16 56643206 + Exonic hg19 GBM TCGA-06-5412-01A 3 0 Out-of-frame Intra-chr q13 q13 Tumor suppressor gene 28875 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86351941 + Exonic hg19 GBM TCGA-06-5412-01A 2 1 Out-of-frame Intra-chr q21.2 q21.2 28876 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-06-5412-01A 2 1 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28877 ChimerSeq STARFusion TCGA_RNA-Seq NCK2-C2orf40 NCK2 chr2 106471745 + C2orf40 chr2 106688300 + Exonic hg19 GBM TCGA-06-5412-01A 2 0 In-Frame Intra-chr q12.2 q12.2 Tumor suppressor gene 28878 ChimerSeq STARFusion TCGA_RNA-Seq NNMT-RBM7 NNMT chr11 114168880 + RBM7 chr11 114272420 + Exonic hg19 GBM TCGA-06-5412-01A 2 0 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 28879 ChimerSeq STARFusion TCGA_RNA-Seq RFX8-NFYB RFX8 chr2 102083239 - NFYB chr12 104529310 - Exonic hg19 GBM TCGA-06-5412-01A 2 0 CDS-5'UTR Inter-chr q11.2 Transcription factor q23.3 Transcription factor 28880 ChimerSeq STARFusion TCGA_RNA-Seq LANCL2-SEPT14 LANCL2 chr7 55479782 + SEPT14 chr7 55886916 - Exonic hg19 GBM TCGA-06-0211-01B 1192 751 In-Frame Intra-chr p11.2 p11.2 Seq+ 28881 ChimerSeq STARFusion TCGA_RNA-Seq CRTC1-KLHL26 CRTC1 chr19 18794638 + KLHL26 chr19 18775071 + Exonic hg19 GBM TCGA-06-0211-01B 16 15 Out-of-frame Intra-chr p13.11 Oncogene p13.11 Seq+ 28882 ChimerSeq STARFusion TCGA_RNA-Seq SEC61G-EGFR SEC61G chr7 54825188 - EGFR chr7 55224226 + Exonic hg19 GBM TCGA-06-0211-01B 10 1 In-Frame Intra-chr p11.2 p11.2 TK:EGFR Oncogene Seq+ 28883 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 GBM TCGA-06-0211-01B 3 1 CDS-5'UTR Intra-chr q23 Seq+ 28884 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55087058 + SEPT14 chr7 55886916 - Exonic hg19 GBM TCGA-06-0211-01B 2 2 Out-of-frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 28885 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-06-0211-01B 2 2 In-Frame Intra-chr q13 Tumor suppressor gene q13 28886 ChimerSeq STARFusion TCGA_RNA-Seq CSNK2A1-TNRC6A CSNK2A1 chr20 485762 - TNRC6A chr16 24788254 + Exonic hg19 GBM TCGA-06-0211-01B 2 0 Out-of-frame Inter-chr p13 Oncogene p12.1 28887 ChimerSeq STARFusion TCGA_RNA-Seq PTPRF-PIGU PTPRF chr1 44019612 + PIGU chr20 33148783 - Exonic hg19 GBM TCGA-06-0211-01B 2 0 Out-of-frame Inter-chr p34.2 q11.22 28888 ChimerSeq STARFusion TCGA_RNA-Seq SHB-LINGO2 SHB chr9 38016008 - LINGO2 chr9 27950704 - Exonic hg19 GBM TCGA-06-0211-01B 2 0 CDS-5'UTR Intra-chr p13.1 p21.1 Seq+ 28889 ChimerSeq STARFusion TCGA_RNA-Seq DSTN-CCDC127 DSTN chr20 17550856 + CCDC127 chr5 206073 - Exonic hg19 GBM TCGA-06-2564-01A 9 6 Out-of-frame Inter-chr p12.1 p15.33 Seq+ 28890 ChimerSeq STARFusion TCGA_RNA-Seq PTEN-STAMBPL1 PTEN chr10 89624381 + STAMBPL1 chr10 90665200 + Exonic hg19 GBM TCGA-06-2564-01A 8 3 Out-of-frame Intra-chr q23.31 Oncogene Tumor suppressor gene q23.31 28891 ChimerSeq STARFusion TCGA_RNA-Seq POTEE-ACTG1 POTEE chr2 132021517 + ACTG1 chr17 79478985 - Exonic hg19 GBM TCGA-06-2564-01A 5 0 Out-of-frame Inter-chr q21.1 q25.3 28892 ChimerSeq STARFusion TCGA_RNA-Seq CCDC127-TERT CCDC127 chr5 216844 - TERT chr5 1282739 - Exonic hg19 GBM TCGA-06-2564-01A 3 3 In-Frame Intra-chr p15.33 p15.33 Oncogene Seq+ 28893 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-06-2564-01A 2 1 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 28894 ChimerSeq STARFusion TCGA_RNA-Seq JAG1-MYL6B JAG1 chr20 10627587 - MYL6B chr12 56551252 + Exonic hg19 GBM TCGA-06-2564-01A 2 0 In-Frame Inter-chr p12.2 q13.2 28895 ChimerSeq STARFusion TCGA_RNA-Seq MTX2-XRCC5 MTX2 chr2 177134397 + XRCC5 chr2 217054948 + Exonic hg19 GBM TCGA-06-2564-01A 2 0 In-Frame Intra-chr q31.1 q35 Tumor suppressor gene 28896 ChimerSeq STARFusion TCGA_RNA-Seq NEK1-FERMT2 NEK1 chr4 170458960 - FERMT2 chr14 53345407 - Exonic hg19 GBM TCGA-06-2564-01A 2 0 In-Frame Inter-chr q33 Other:NEK q22.1 28897 ChimerSeq STARFusion TCGA_RNA-Seq ATP2A2-GAPDH ATP2A2 chr12 110771088 + GAPDH chr12 6647364 + Exonic hg19 GBM TCGA-41-4097-01A 32 42 CDS-3'UTR Intra-chr q24.11 p13.31 28898 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R2B-CCT3 PPP2R2B chr5 146017814 - CCT3 chr1 156294880 - Exonic hg19 GBM TCGA-41-4097-01A 35 20 In-Frame Inter-chr q32 q22 Seq+ 28899 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A26-IMMT SLC25A26 chr3 66313803 + IMMT chr2 86374956 - Exonic hg19 GBM TCGA-41-4097-01A 26 12 In-Frame Inter-chr p11.2 Seq+ 28900 ChimerSeq STARFusion TCGA_RNA-Seq STIM1-MEF2D STIM1 chr11 3877639 + MEF2D chr1 156453222 - Exonic hg19 GBM TCGA-41-4097-01A 5 1 CDS-5'UTR Inter-chr p15.4 q22 Transcription factor Seq+ 28901 ChimerSeq STARFusion TCGA_RNA-Seq NUP98-C1orf61 NUP98 chr11 3818630 - C1orf61 chr1 156374393 - Exonic hg19 GBM TCGA-41-4097-01A 2 1 5'UTR-CDS Inter-chr p15.4 Oncogene Tumor suppressor gene q22 28902 ChimerSeq STARFusion TCGA_RNA-Seq RAP1B-CTDSP2 RAP1B chr12 69004823 + CTDSP2 chr12 58223379 - Exonic hg19 GBM TCGA-26-5135-01A 17 5 5'UTR-CDS Intra-chr q15 q14.1 Seq+ 28903 ChimerSeq STARFusion TCGA_RNA-Seq RAP1B-CTDSP2 RAP1B chr12 69004832 + CTDSP2 chr12 58223379 - Exonic hg19 GBM TCGA-26-5135-01A 7 5 5'UTR-CDS Intra-chr q15 q14.1 Seq+ 28904 ChimerSeq STARFusion TCGA_RNA-Seq MDM1-PTPRR MDM1 chr12 68724887 - PTPRR chr12 71158558 - Exonic hg19 GBM TCGA-26-5135-01A 4 1 Out-of-frame Intra-chr q15 q15 Seq+ 28905 ChimerSeq STARFusion TCGA_RNA-Seq EXOC1-NUP107 EXOC1 chr4 56726707 + NUP107 chr12 69135593 + Exonic hg19 GBM TCGA-26-5135-01A 3 0 In-Frame Inter-chr q12 q15 Seq+ 28906 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-26-5135-01A 3 0 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28907 ChimerSeq STARFusion TCGA_RNA-Seq KATNBL1-TNPO3 KATNBL1 chr15 34502152 - TNPO3 chr7 128624313 - Exonic hg19 GBM TCGA-26-5135-01A 2 1 Out-of-frame Inter-chr q14 q32.1 Seq+ 28908 ChimerSeq STARFusion TCGA_RNA-Seq KDR-RAB3IP KDR chr4 55984771 - RAB3IP chr12 70206744 + Exonic hg19 GBM TCGA-26-5135-01A 2 0 Out-of-frame Inter-chr q12 TK:VEGFR Oncogene q15 28909 ChimerSeq STARFusion TCGA_RNA-Seq LOC100507266-MSX1 LOC100507266 chr4 4651269 + MSX1 chr4 4864428 + Exonic hg19 GBM TCGA-26-5135-01A 2 0 5'UTR-CDS Intra-chr p16.2 Transcription factor 28910 ChimerSeq STARFusion TCGA_RNA-Seq RAP1B-LOC100506844 RAP1B chr12 69004823 + LOC100506844 chr12 58329336 - Exonic hg19 GBM TCGA-26-5135-01A 2 0 5'UTR-3'UTR Intra-chr q15 28911 ChimerSeq STARFusion TCGA_RNA-Seq FKBP8-SLC1A6 FKBP8 chr19 18644080 - SLC1A6 chr19 15061202 - Exonic hg19 GBM TCGA-14-1034-01A 95 78 Out-of-frame Intra-chr p13.11 p13.12 Seq+ 28912 ChimerSeq STARFusion TCGA_RNA-Seq EIF4A1-PHOSPHO1 EIF4A1 chr17 7478576 + PHOSPHO1 chr17 47302366 - Exonic hg19 GBM TCGA-14-1034-01A 32 43 In-Frame Intra-chr p13.1 q21.32 Seq+ 28913 ChimerSeq STARFusion TCGA_RNA-Seq EIF4A1-PHOSPHO1 EIF4A1 chr17 7478576 + PHOSPHO1 chr17 47302493 - Exonic hg19 GBM TCGA-14-1034-01A 19 43 CDS-5'UTR Intra-chr p13.1 q21.32 Seq+ 28914 ChimerSeq STARFusion TCGA_RNA-Seq MT1A-MT3 MT1A chr16 56673192 + MT3 chr16 56623447 + Exonic hg19 GBM TCGA-14-1034-01A 7 0 Out-of-frame Intra-chr q13 q13 28915 ChimerSeq STARFusion TCGA_RNA-Seq CNGA3-RNF11 CNGA3 chr2 98962997 + RNF11 chr1 51735628 + Exonic hg19 GBM TCGA-14-1034-01A 2 0 5'UTR-CDS Inter-chr q11.2 p32.3 28916 ChimerSeq STARFusion TCGA_RNA-Seq FAF1-EIF5 FAF1 chr1 51048290 - EIF5 chr14 103805509 + Exonic hg19 GBM TCGA-14-1034-01A 2 0 In-Frame Inter-chr p32.3 q32.32 28917 ChimerSeq STARFusion TCGA_RNA-Seq FXR2-PTPRZ1 FXR2 chr17 7507075 - PTPRZ1 chr7 121668606 + Exonic hg19 GBM TCGA-14-1034-01A 2 0 In-Frame Inter-chr p13.1 q31.32 28918 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-14-1034-01A 2 0 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 28919 ChimerSeq STARFusion TCGA_RNA-Seq CNN3-ALG14 CNN3 chr1 95392394 - ALG14 chr1 95448862 - Exonic hg19 GBM TCGA-26-5136-01B 61 50 In-Frame Intra-chr p21.3 p21.3 Seq+ 28920 ChimerSeq STARFusion TCGA_RNA-Seq FBXW9-PRDX2 FBXW9 chr19 12805408 - PRDX2 chr19 12912084 - Exonic hg19 GBM TCGA-26-5136-01B 9 13 CDS-5'UTR Intra-chr p13.13 p13.13 Seq+ 28921 ChimerSeq STARFusion TCGA_RNA-Seq SEC61G-CHCHD2 SEC61G chr7 54826851 - CHCHD2 chr7 56172168 - Exonic hg19 GBM TCGA-28-2513-01A 1084 75 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 28922 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55268106 + SEPT14 chr7 55863785 - Exonic hg19 GBM TCGA-28-2513-01A 671 213 In-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 28923 ChimerSeq STARFusion TCGA_RNA-Seq SEC61G-CHCHD2 SEC61G chr7 54826851 - CHCHD2 chr7 56174167 - Exonic hg19 GBM TCGA-28-2513-01A 139 75 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 28924 ChimerSeq STARFusion TCGA_RNA-Seq SEC61G-CHCHD2 SEC61G chr7 54826855 - CHCHD2 chr7 56172168 - Exonic hg19 GBM TCGA-28-2513-01A 109 75 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 28925 ChimerSeq STARFusion TCGA_RNA-Seq LANCL2-SEPT14 LANCL2 chr7 55433922 + SEPT14 chr7 55914330 - Exonic hg19 GBM TCGA-28-2513-01A 26 19 In-Frame Intra-chr p11.2 p11.2 Seq+ 28926 ChimerSeq STARFusion TCGA_RNA-Seq SEC61G-PHKG1 SEC61G chr7 54826851 - PHKG1 chr7 56156668 - Exonic hg19 GBM TCGA-28-2513-01A 23 0 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 28927 ChimerSeq STARFusion TCGA_RNA-Seq NBPF3-EPHB2 NBPF3 chr1 21771712 + EPHB2 chr1 23189530 + Exonic hg19 GBM TCGA-28-2513-01A 14 6 In-Frame Intra-chr p36.12 p36.12 Tumor suppressor gene Seq+ 28928 ChimerSeq STARFusion TCGA_RNA-Seq LANCL2-SEPT14 LANCL2 chr7 55433922 + SEPT14 chr7 55929704 - Exonic hg19 GBM TCGA-28-2513-01A 5 19 CDS-5'UTR Intra-chr p11.2 p11.2 Seq+ 28929 ChimerSeq STARFusion TCGA_RNA-Seq RASSF8-SSPN RASSF8 chr12 26208379 + SSPN chr12 26377226 + Exonic hg19 GBM TCGA-28-2513-01A 2 2 Out-of-frame Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 28930 ChimerSeq STARFusion TCGA_RNA-Seq DMXL2-GCOM1 DMXL2 chr15 51914656 - GCOM1 chr15 57953648 + Exonic hg19 GBM TCGA-28-2513-01A 2 1 In-Frame Intra-chr q21.2 q21.3 28931 ChimerSeq STARFusion TCGA_RNA-Seq DMXL2-MYZAP DMXL2 chr15 51914656 - MYZAP chr15 57953648 + Exonic hg19 GBM TCGA-28-2513-01A 2 1 In-Frame Intra-chr q21.2 q21.3 28932 ChimerSeq STARFusion TCGA_RNA-Seq GATS-PILRB GATS chr7 99820220 - PILRB chr7 99952766 + Exonic hg19 GBM TCGA-28-2513-01A 2 0 3'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 28933 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R1-NRCAM PPP6R1 chr19 55748011 - NRCAM chr7 107825058 - Exonic hg19 GBM TCGA-28-2513-01A 2 0 Out-of-frame Inter-chr q13.42 q31.1 Tumor suppressor gene 28934 ChimerSeq STARFusion TCGA_RNA-Seq STAU2-LRRC6 STAU2 chr8 74659018 - LRRC6 chr8 133673873 - Exonic hg19 GBM TCGA-41-3915-01A 4 1 5'UTR-CDS Intra-chr q21.11 q24.22 Seq+ 28935 ChimerSeq STARFusion TCGA_RNA-Seq ZFPM2-CHMP4C ZFPM2 chr8 106331209 + CHMP4C chr8 82665299 + Exonic hg19 GBM TCGA-41-3915-01A 3 0 In-Frame Intra-chr q22.3 Transcription factor q21.13 28936 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHF2-TRIQK PLEKHF2 chr8 96146258 + TRIQK chr8 93966792 - Exonic hg19 GBM TCGA-41-3915-01A 2 1 5'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 28937 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-41-3915-01A 2 0 5'UTR-CDS Intra-chr q13 q13 28938 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-ENO1 RCC1 chr1 28835417 + ENO1 chr1 8927309 - Exonic hg19 GBM TCGA-41-3915-01A 2 0 5'UTR-CDS Intra-chr p35.3 p36.23 28939 ChimerSeq STARFusion TCGA_RNA-Seq TEAD1-NAV2 TEAD1 chr11 12697108 + NAV2 chr11 19854030 + Exonic hg19 GBM TCGA-41-3915-01A 2 0 5'UTR-CDS Intra-chr p15.3 Transcription factor p15.1 28940 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1739325 + Exonic hg19 GBM TCGA-76-4925-01A 579 494 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 28941 ChimerSeq STARFusion TCGA_RNA-Seq SRP68-AP1M2 SRP68 chr17 74046509 - AP1M2 chr19 10694746 - Exonic hg19 GBM TCGA-76-4925-01A 17 5 In-Frame Inter-chr q25.1 p13.2 Seq+ 28942 ChimerSeq STARFusion TCGA_RNA-Seq BRPF3-STARD9 BRPF3 chr6 36185787 + STARD9 chr15 42987941 + Exonic hg19 GBM TCGA-76-4925-01A 9 5 Out-of-frame Inter-chr p21.31 q15.2 Seq+ 28943 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-P2RY8 ASMTL chrY 1503915 - P2RY8 chrY 1535475 - Exonic hg19 GBM TCGA-76-4925-01A 5 4 CDS-5'UTR Intra-chr p22.33 p22.33 Seq+ 28944 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-76-4925-01A 6 0 5'UTR-CDS Intra-chr q13 q13 28945 ChimerSeq STARFusion TCGA_RNA-Seq PEAK1-TM9SF3 PEAK1 chr15 77712348 - TM9SF3 chr10 98292947 - Exonic hg19 GBM TCGA-76-4925-01A 5 4 5'UTR-CDS Inter-chr q24.3 q24.1 28946 ChimerSeq STARFusion TCGA_RNA-Seq BCR-MKL1 BCR chr22 23524426 + MKL1 chr22 40859290 - Exonic hg19 GBM TCGA-76-4925-01A 4 1 CDS-5'UTR Intra-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q13.2 28947 ChimerSeq STARFusion TCGA_RNA-Seq PHF21B-C22orf28 PHF21B chr22 45404426 - C22orf28 chr22 32804820 - Exonic hg19 GBM TCGA-76-4925-01A 3 0 In-Frame Intra-chr q13.31 28948 ChimerSeq STARFusion TCGA_RNA-Seq PSORS1C1-MUC22 PSORS1C1 chr6_qbl_hap6 2389439 + MUC22 chr6_qbl_hap6 2295905 + Exonic hg19 GBM TCGA-76-4925-01A 2 1 Out-of-frame Intra-chr p21.33 28949 ChimerSeq STARFusion TCGA_RNA-Seq RAB3GAP2-EPRS RAB3GAP2 chr1 220406141 - EPRS chr1 220213611 - Exonic hg19 GBM TCGA-76-4925-01A 2 1 Out-of-frame Intra-chr q41 q41 28950 ChimerSeq STARFusion TCGA_RNA-Seq CBX3-HNRNPA2B1 CBX3 chr7 26248175 + HNRNPA2B1 chr7 26237081 - Exonic hg19 GBM TCGA-76-4925-01A 2 0 In-Frame Intra-chr p15.2 p15.2 28951 ChimerSeq STARFusion TCGA_RNA-Seq GTDC2-HIGD1A GTDC2 chr3 43147328 - HIGD1A chr3 42835767 - Exonic hg19 GBM TCGA-76-4925-01A 2 0 Out-of-frame Intra-chr p22.1 28952 ChimerSeq STARFusion TCGA_RNA-Seq SFPQ-HSD17B4 SFPQ chr1 35652602 - HSD17B4 chr5 118860911 + Exonic hg19 GBM TCGA-76-4925-01A 2 0 In-Frame Inter-chr p34.3 q23.1 28953 ChimerSeq STARFusion TCGA_RNA-Seq YEATS4-XRCC6BP1 YEATS4 chr12 69764755 + XRCC6BP1 chr12 58339411 + Exonic hg19 GBM TCGA-06-0138-01A 669 541 In-Frame Intra-chr q15 Seq+ 28954 ChimerSeq STARFusion TCGA_RNA-Seq YEATS4-MARS YEATS4 chr12 69764755 + MARS chr12 57905481 + Exonic hg19 GBM TCGA-06-0138-01A 124 76 Out-of-frame Intra-chr q15 q13.3 Seq+ 28955 ChimerSeq STARFusion TCGA_RNA-Seq SLC35E3-OS9 SLC35E3 chr12 69145970 + OS9 chr12 58109543 + Exonic hg19 GBM TCGA-06-0138-01A 62 58 In-Frame Intra-chr q15 q13.3 Seq+ 28956 ChimerSeq STARFusion TCGA_RNA-Seq CPM-LYZ CPM chr12 69326458 - LYZ chr12 69743888 + Exonic hg19 GBM TCGA-06-0138-01A 41 32 In-Frame Intra-chr q15 q15 Seq+ 28957 ChimerSeq STARFusion TCGA_RNA-Seq METTL21B-CPM METTL21B chr12 58166911 + CPM chr12 69326620 - Exonic hg19 GBM TCGA-06-0138-01A 15 10 CDS-5'UTR Intra-chr q15 Seq+ 28958 ChimerSeq STARFusion TCGA_RNA-Seq METTL21B-LYZ METTL21B chr12 58166911 + LYZ chr12 69743888 + Exonic hg19 GBM TCGA-06-0138-01A 13 5 In-Frame Intra-chr q15 Seq+ 28959 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-LYZ TSFM chr12 58186856 + LYZ chr12 69743888 + Exonic hg19 GBM TCGA-06-0138-01A 10 9 In-Frame Intra-chr q14.1 q15 Seq+ 28960 ChimerSeq STARFusion TCGA_RNA-Seq EPS15L1-CALR3 EPS15L1 chr19 16582724 - CALR3 chr19 16601381 - Exonic hg19 GBM TCGA-06-0138-01A 10 0 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 28961 ChimerSeq STARFusion TCGA_RNA-Seq METTL21B-CPM METTL21B chr12 58166856 + CPM chr12 69326620 - Exonic hg19 GBM TCGA-06-0138-01A 4 10 CDS-5'UTR Intra-chr q15 Seq+ 28962 ChimerSeq STARFusion TCGA_RNA-Seq EPS15L1-CALR3 EPS15L1 chr19 16582724 - CALR3 chr19 16596068 - Exonic hg19 GBM TCGA-06-0138-01A 5 0 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 28963 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-KBTBD11 CPSF6 chr12 69656342 + KBTBD11 chr8 1954711 + Exonic hg19 GBM TCGA-06-0138-01A 3 0 3'UTR-3'UTR Inter-chr q15 28964 ChimerSeq STARFusion TCGA_RNA-Seq EPS15L1-CALR3 EPS15L1 chr19 16582724 - CALR3 chr19 16594926 - Exonic hg19 GBM TCGA-06-0138-01A 3 0 In-Frame Intra-chr p13.11 p13.11 Seq+ 28965 ChimerSeq STARFusion TCGA_RNA-Seq MT1E-MT3 MT1E chr16 56660443 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-06-0138-01A 3 0 In-Frame Intra-chr q13 q13 28966 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-06-0138-01A 2 1 In-Frame Intra-chr q13 Tumor suppressor gene q13 28967 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-GLI1 TSFM chr12 58180945 + GLI1 chr12 57858456 + Exonic hg19 GBM TCGA-06-0138-01A 2 1 Out-of-frame Intra-chr q14.1 q13.3 Tumor suppressor gene Transcription factor Seq+ 28968 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2IP-PSMD14 ERBB2IP chr5 65222634 + PSMD14 chr2 162223989 + Exonic hg19 GBM TCGA-06-0138-01A 2 0 5'UTR-CDS Inter-chr q24.2 28969 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-UBQLN4 ZSWIM4 chr19 13920034 + UBQLN4 chr1 156012704 - Exonic hg19 GBM TCGA-26-5139-01A 2 2 In-Frame Inter-chr p13.13 q22 Seq+ 28970 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPUL1-ZNF765 HNRNPUL1 chr19 41787180 + ZNF765 chr19 53905318 + Exonic hg19 GBM TCGA-26-5139-01A 2 0 In-Frame Intra-chr q13.2 q13.42 Transcription factor 28971 ChimerSeq STARFusion TCGA_RNA-Seq HRH1-ATG7 HRH1 chr3 11196240 + ATG7 chr3 11340160 + Exonic hg19 GBM TCGA-26-5139-01A 2 0 5'UTR-5'UTR Intra-chr p25.3 p25.3 Seq+ 28972 ChimerSeq STARFusion TCGA_RNA-Seq TMEM242-TIMM9 TMEM242 chr6 157739814 - TIMM9 chr14 58877656 - Exonic hg19 GBM TCGA-26-5139-01A 2 0 In-Frame Inter-chr q25.3 q23.1 28973 ChimerSeq STARFusion TCGA_RNA-Seq PGD-CAMTA1 PGD chr1 10459761 + CAMTA1 chr1 7309551 + Exonic hg19 GBM TCGA-06-0190-02A 20 17 Out-of-frame Intra-chr p36.22 p36.31 Tumor suppressor gene Transcription factor Seq+ 28974 ChimerSeq STARFusion TCGA_RNA-Seq PEX14-CLP1 PEX14 chr1 10555378 + CLP1 chr11 57426927 + Exonic hg19 GBM TCGA-06-0190-02A 5 1 CDS-5'UTR Inter-chr p36.22 q12.1 Seq+ 28975 ChimerSeq STARFusion TCGA_RNA-Seq PIAS4-GLYATL2 PIAS4 chr19 4029034 + GLYATL2 chr11 58611997 - Exonic hg19 GBM TCGA-06-0190-02A 3 3 CDS-5'UTR Inter-chr p13.3 q12.1 Seq+ 28976 ChimerSeq STARFusion TCGA_RNA-Seq GPR157-TLE6 GPR157 chr1 9188704 - TLE6 chr19 2980098 + Exonic hg19 GBM TCGA-06-0190-02A 2 2 Out-of-frame Inter-chr p36.22 p13.3 28977 ChimerSeq STARFusion TCGA_RNA-Seq DPP6-ACTR3B DPP6 chr7 153750148 + ACTR3B chr7 152480272 + Exonic hg19 GBM TCGA-06-0190-02A 2 0 Out-of-frame Intra-chr q36.1 Seq+ 28978 ChimerSeq STARFusion TCGA_RNA-Seq TIMP2-LGALS3BP TIMP2 chr17 76921041 - LGALS3BP chr17 76973296 - Exonic hg19 GBM TCGA-06-0190-02A 2 0 CDS-5'UTR Intra-chr q25.3 q25.3 28979 ChimerSeq STARFusion TCGA_RNA-Seq TMSB15A-H2BFXP TMSB15A chrX 101769992 - H2BFXP chrX 103316442 - Exonic hg19 GBM TCGA-06-0190-02A 2 0 CDS-3'UTR Intra-chr q22.1 28980 ChimerSeq STARFusion TCGA_RNA-Seq ANKDD1A-PLEKHO2 ANKDD1A chr15 65234762 + PLEKHO2 chr15 65152093 + Exonic hg19 GBM TCGA-06-0152-02A 11 7 In-Frame Intra-chr q22.31 q22.31 Seq+ 28981 ChimerSeq STARFusion TCGA_RNA-Seq TCHH-GFAP TCHH chr1 152084652 - GFAP chr17 42988825 - Exonic hg19 GBM TCGA-06-0152-02A 8 0 Out-of-frame Inter-chr q21.3 q21.31 28982 ChimerSeq STARFusion TCGA_RNA-Seq ANKDD1A-PLEKHO2 ANKDD1A chr15 65226434 + PLEKHO2 chr15 65152093 + Exonic hg19 GBM TCGA-06-0152-02A 5 7 In-Frame Intra-chr q22.31 q22.31 Seq+ 28983 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 GBM TCGA-06-0152-02A 3 0 CDS-5'UTR Intra-chr q23 Seq+ 28984 ChimerSeq STARFusion TCGA_RNA-Seq GDAP1-FLJ39080 GDAP1 chr8 75275288 + FLJ39080 chr8 75525088 + Exonic hg19 GBM TCGA-06-0152-02A 2 0 5'UTR-5'UTR Intra-chr q21.11 28985 ChimerSeq STARFusion TCGA_RNA-Seq TTLL1-PACSIN2 TTLL1 chr22 43442416 - PACSIN2 chr22 43308163 - Exonic hg19 GBM TCGA-06-0152-02A 2 0 CDS-5'UTR Intra-chr q13.2 q13.2 28986 ChimerSeq STARFusion TCGA_RNA-Seq USP47-DKK3 USP47 chr11 11863771 + DKK3 chr11 11990034 - Exonic hg19 GBM TCGA-06-0152-02A 2 0 In-Frame Intra-chr p15.3 p15.3 Tumor suppressor gene 28987 ChimerSeq STARFusion TCGA_RNA-Seq ZNF738-CHMP1A ZNF738 chr19 21558766 + CHMP1A chr16 89713739 - Exonic hg19 GBM TCGA-06-0152-02A 2 0 5'UTR-CDS Inter-chr p12 q24.3 Seq+ 28988 ChimerSeq STARFusion TCGA_RNA-Seq BCAN-NTRK1 BCAN chr1 156628525 + NTRK1 chr1 156844698 + Exonic hg19 GBM TCGA-19-2619-01A 971 613 In-Frame Intra-chr q23.1 q23.1 Oncogene Seq+ 28989 ChimerSeq STARFusion TCGA_RNA-Seq LINC00624-C1orf61 LINC00624 chr1 146989266 - C1orf61 chr1 156374393 - Exonic hg19 GBM TCGA-19-2619-01A 414 323 Out-of-frame Intra-chr q21.2 q22 28990 ChimerSeq STARFusion TCGA_RNA-Seq NUCKS1-PM20D1 NUCKS1 chr1 205719085 - PM20D1 chr1 205811017 - Exonic hg19 GBM TCGA-19-2619-01A 126 13 In-Frame Intra-chr q32.1 q32.1 Seq+ 28991 ChimerSeq STARFusion TCGA_RNA-Seq C1orf61-RHBG C1orf61 chr1 156396590 - RHBG chr1 156352539 + Exonic hg19 GBM TCGA-19-2619-01A 40 345 5'UTR-5'UTR Intra-chr q22 q22 28992 ChimerSeq STARFusion TCGA_RNA-Seq C1orf61-RHBG C1orf61 chr1 156384446 - RHBG chr1 156352539 + Exonic hg19 GBM TCGA-19-2619-01A 30 345 Out-of-frame Intra-chr q22 q22 28993 ChimerSeq STARFusion TCGA_RNA-Seq C1orf61-RHBG C1orf61 chr1 156399168 - RHBG chr1 156344398 + Exonic hg19 GBM TCGA-19-2619-01A 18 345 5'UTR-5'UTR Intra-chr q22 q22 28994 ChimerSeq STARFusion TCGA_RNA-Seq C1orf61-RHBG C1orf61 chr1 156399168 - RHBG chr1 156352539 + Exonic hg19 GBM TCGA-19-2619-01A 7 345 5'UTR-5'UTR Intra-chr q22 q22 28995 ChimerSeq STARFusion TCGA_RNA-Seq C1orf61-RHBG C1orf61 chr1 156384446 - RHBG chr1 156347092 + Exonic hg19 GBM TCGA-19-2619-01A 4 345 Out-of-frame Intra-chr q22 q22 28996 ChimerSeq STARFusion TCGA_RNA-Seq NUCKS1-PM20D1 NUCKS1 chr1 205719085 - PM20D1 chr1 205801894 - Exonic hg19 GBM TCGA-19-2619-01A 16 13 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 28997 ChimerSeq STARFusion TCGA_RNA-Seq WBSCR17-PPP1R9A WBSCR17 chr7 70800719 + PPP1R9A chr7 94827661 + Exonic hg19 GBM TCGA-19-2619-01A 16 9 In-Frame Intra-chr q11.22 q21.3 Seq+ 28998 ChimerSeq STARFusion TCGA_RNA-Seq AGTRAP-VPS13D AGTRAP chr1 11796292 + VPS13D chr1 12516054 + Exonic hg19 GBM TCGA-19-2619-01A 13 9 In-Frame Intra-chr p36.22 p36.22 Seq+ 28999 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2B-TNFSF18 GATAD2B chr1 153895209 - TNFSF18 chr1 173013109 - Exonic hg19 GBM TCGA-19-2619-01A 5 6 5'UTR-CDS Intra-chr Transcription factor q25.1 Seq+ 29000 ChimerSeq STARFusion TCGA_RNA-Seq SEMA3A-ZNF273 SEMA3A chr7 83823791 - ZNF273 chr7 64388032 + Exonic hg19 GBM TCGA-19-2619-01A 4 2 In-Frame Intra-chr q21.11 q11.21 Transcription factor 29001 ChimerSeq STARFusion TCGA_RNA-Seq AGO1-LOC402779 AGO1 chr1 36360870 + LOC402779 chr1 34334804 + Exonic hg19 GBM TCGA-19-2619-01A 3 1 Out-of-frame Intra-chr p34.3 29002 ChimerSeq STARFusion TCGA_RNA-Seq PIP5K1A-NPR1 PIP5K1A chr1 151209239 + NPR1 chr1 153655852 + Exonic hg19 GBM TCGA-19-2619-01A 3 1 Out-of-frame Intra-chr q21.3 q21.3 29003 ChimerSeq STARFusion TCGA_RNA-Seq PTMS-BRPF3 PTMS chr12 6879131 + BRPF3 chr6 36169348 + Exonic hg19 GBM TCGA-19-2619-01A 3 0 Out-of-frame Inter-chr p13.31 p21.31 29004 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 GBM TCGA-19-2619-01A 3 0 CDS-5'UTR Intra-chr q23 Seq+ 29005 ChimerSeq STARFusion TCGA_RNA-Seq NUCKS1-SLC41A1 NUCKS1 chr1 205719085 - SLC41A1 chr1 205780215 - Exonic hg19 GBM TCGA-19-2619-01A 2 2 CDS-5'UTR Intra-chr q32.1 q32.1 29006 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-19-2619-01A 2 1 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 29007 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R3A-NEK10 PPP2R3A chr3 135722335 + NEK10 chr3 27297862 - Exonic hg19 GBM TCGA-19-2619-01A 2 0 Out-of-frame Intra-chr q22.2 p24.1 Other:NEK 29008 ChimerSeq STARFusion TCGA_RNA-Seq ADAM17-YWHAQ ADAM17 chr2 9675963 - YWHAQ chr2 9731644 - Exonic hg19 GBM TCGA-76-4929-01A 235 114 In-Frame Intra-chr p25.1 p25.1 Seq+ 29009 ChimerSeq STARFusion TCGA_RNA-Seq JMJD1C-NRBF2 JMJD1C chr10 65024411 - NRBF2 chr10 64905969 + Exonic hg19 GBM TCGA-76-4929-01A 15 5 In-Frame Intra-chr q21.3 q21.3 Seq+ 29010 ChimerSeq STARFusion TCGA_RNA-Seq CD302-LY75 CD302 chr2 160654643 - LY75 chr2 160676431 - Exonic hg19 GBM TCGA-76-4929-01A 9 4 In-Frame Intra-chr q24.2 q24.2 29011 ChimerSeq STARFusion TCGA_RNA-Seq GPLD1-TDP2 GPLD1 chr6 24433415 - TDP2 chr6 24651297 - Exonic hg19 GBM TCGA-76-4929-01A 7 5 In-Frame Intra-chr p22.3 p22.3 Seq+ 29012 ChimerSeq STARFusion TCGA_RNA-Seq ZNF532-GMPR ZNF532 chr18 56621031 + GMPR chr6 16247073 + Exonic hg19 GBM TCGA-76-4929-01A 4 0 In-Frame Inter-chr q21.32 Transcription factor p22.3 Seq+ 29013 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-76-4929-01A 2 0 5'UTR-CDS Intra-chr q13 q13 29014 ChimerSeq STARFusion TCGA_RNA-Seq NKTR-MRPL1 NKTR chr3 42642556 + MRPL1 chr4 78870951 + Exonic hg19 GBM TCGA-76-4929-01A 2 0 Out-of-frame Inter-chr p22.1 q21.1 29015 ChimerSeq STARFusion TCGA_RNA-Seq RECK-UNC13B RECK chr9 36058898 + UNC13B chr9 35366944 + Exonic hg19 GBM TCGA-12-0619-01A 7 9 In-Frame Intra-chr p13.3 Tumor suppressor gene p13.3 Seq+ 29016 ChimerSeq STARFusion TCGA_RNA-Seq MED4-HTR2A MED4 chr13 48653980 - HTR2A chr13 47409774 - Exonic hg19 GBM TCGA-12-0619-01A 6 5 In-Frame Intra-chr q14.2 q14.2 Seq+ 29017 ChimerSeq STARFusion TCGA_RNA-Seq CAPRIN1-RNF216 CAPRIN1 chr11 34074186 + RNF216 chr7 5681005 - Exonic hg19 GBM TCGA-12-0619-01A 6 1 Out-of-frame Inter-chr p13 p22.1 Seq+ 29018 ChimerSeq STARFusion TCGA_RNA-Seq RB1-SCEL RB1 chr13 48955579 + SCEL chr13 78171680 + Exonic hg19 GBM TCGA-12-0619-01A 4 1 Out-of-frame Intra-chr q14.2 Oncogene Tumor suppressor gene q22.3 29019 ChimerSeq STARFusion TCGA_RNA-Seq TNRC18-PRDM16 TNRC18 chr7 5460691 - PRDM16 chr1 3301716 + Exonic hg19 GBM TCGA-12-0619-01A 3 0 Out-of-frame Inter-chr p22.1 p36.32 Transcription factor 29020 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-12-0619-01A 2 3 In-Frame Intra-chr q13 Tumor suppressor gene q13 29021 ChimerSeq STARFusion TCGA_RNA-Seq CAPRIN1-RNF216 CAPRIN1 chr11 34074183 + RNF216 chr7 5681007 - Exonic hg19 GBM TCGA-12-0619-01A 2 1 Out-of-frame Inter-chr p13 p22.1 Seq+ 29022 ChimerSeq STARFusion TCGA_RNA-Seq MINPP1-LIPM MINPP1 chr10 89280926 + LIPM chr10 90568055 + Exonic hg19 GBM TCGA-12-0619-01A 2 1 Out-of-frame Intra-chr q23.2 q23.31 29023 ChimerSeq STARFusion TCGA_RNA-Seq HRH1-ATG7 HRH1 chr3 11196240 + ATG7 chr3 11340160 + Exonic hg19 GBM TCGA-12-0619-01A 2 0 5'UTR-5'UTR Intra-chr p25.3 p25.3 Seq+ 29024 ChimerSeq STARFusion TCGA_RNA-Seq THOC2-SUCLG1 THOC2 chrX 122840708 - SUCLG1 chr2 84650896 - Exonic hg19 GBM TCGA-12-0619-01A 2 0 In-Frame Inter-chr q25 p11.2 29025 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-12-0618-01A 3 4 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 29026 ChimerSeq STARFusion TCGA_RNA-Seq NOVA1-CHMP1A NOVA1 chr14 26941526 - CHMP1A chr16 89713739 - Exonic hg19 GBM TCGA-12-0618-01A 2 1 In-Frame Inter-chr q12 q24.3 29027 ChimerSeq STARFusion TCGA_RNA-Seq ABL2-POLR2J2 ABL2 chr1 179090730 - POLR2J2 chr7 102281220 - Exonic hg19 GBM TCGA-12-0618-01A 2 0 CDS-3'UTR Inter-chr q25.2 TK:Abl Oncogene q22.1 29028 ChimerSeq STARFusion TCGA_RNA-Seq ABL2-UPK3BL ABL2 chr1 179090730 - UPK3BL chr7 102281220 - Exonic hg19 GBM TCGA-12-0618-01A 2 0 Out-of-frame Inter-chr q25.2 TK:Abl Oncogene 29029 ChimerSeq STARFusion TCGA_RNA-Seq CCDC122-ENOX1 CCDC122 chr13 44448978 - ENOX1 chr13 44241680 - Exonic hg19 GBM TCGA-12-0618-01A 2 0 5'UTR-5'UTR Intra-chr q14.11 q14.11 Seq+ 29030 ChimerSeq STARFusion TCGA_RNA-Seq DCTN2-CYP27B1 DCTN2 chr12 57925798 - CYP27B1 chr12 58157959 - Exonic hg19 GBM TCGA-12-0618-01A 2 0 Out-of-frame Intra-chr q13.3 q14.1 29031 ChimerSeq STARFusion TCGA_RNA-Seq GPR125-DNER GPR125 chr4 22425814 - DNER chr2 230456604 - Exonic hg19 GBM TCGA-12-0618-01A 2 0 In-Frame Inter-chr q36.3 29032 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 GBM TCGA-12-0618-01A 2 0 In-Frame Intra-chr p11.21 p11.21 29033 ChimerSeq STARFusion TCGA_RNA-Seq TTLL5-IFT43 TTLL5 chr14 76349245 + IFT43 chr14 76455228 + Exonic hg19 GBM TCGA-12-0618-01A 2 0 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 29034 ChimerSeq STARFusion TCGA_RNA-Seq SCD5-TMEM150C SCD5 chr4 83601860 - TMEM150C chr4 83425820 - Exonic hg19 GBM TCGA-06-5416-01A 19 8 CDS-5'UTR Intra-chr q21.22 q21.22 Seq+ 29035 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80963762 - MRPS28 chr8 80831383 - Exonic hg19 GBM TCGA-06-5416-01A 3 2 In-Frame Intra-chr q21.13 q21.13 29036 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD12-ZDHHC19 ANKRD12 chr18 9137871 + ZDHHC19 chr3 195936386 - Exonic hg19 GBM TCGA-06-5416-01A 2 0 5'UTR-CDS Inter-chr p11.22 q29 29037 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-06-5416-01A 2 0 5'UTR-CDS Intra-chr q13 q13 29038 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD1-MAP2K5 PCMTD1 chr8 52758221 - MAP2K5 chr15 68098984 + Exonic hg19 GBM TCGA-06-5416-01A 2 0 Out-of-frame Inter-chr q11.23 q23 STE:STE7 29039 ChimerSeq STARFusion TCGA_RNA-Seq NFIA-RNLS NFIA chr1 61554352 + RNLS chr10 90122482 - Exonic hg19 GBM TCGA-19-0957-02A 16 17 In-Frame Inter-chr p31.3 Transcription factor q23.31 Seq+ 29040 ChimerSeq STARFusion TCGA_RNA-Seq RAB4B-EXOC4 RAB4B chr19 41284296 + EXOC4 chr7 133041084 + Exonic hg19 GBM TCGA-19-0957-02A 9 5 In-Frame Inter-chr q13.2 q33 Seq+ 29041 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-19-0957-02A 6 3 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 29042 ChimerSeq STARFusion TCGA_RNA-Seq EXOC4-RAB4B EXOC4 chr7 133002144 + RAB4B chr19 41285924 + Exonic hg19 GBM TCGA-19-0957-02A 5 4 In-Frame Inter-chr q33 q13.2 Seq+ 29043 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-19-0957-02A 4 1 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 29044 ChimerSeq STARFusion TCGA_RNA-Seq LOC100507250-CPM LOC100507250 chr12 69079643 - CPM chr12 69326620 - Exonic hg19 GBM TCGA-19-0957-02A 2 3 3'UTR-5'UTR Intra-chr q15 29045 ChimerSeq STARFusion TCGA_RNA-Seq PIP4K2C-C12orf56 PIP4K2C chr12 57987905 + C12orf56 chr12 64712760 - Exonic hg19 GBM TCGA-19-0957-02A 2 1 In-Frame Intra-chr q13.3 q14.2 29046 ChimerSeq STARFusion TCGA_RNA-Seq AHDC1-TMPO AHDC1 chr1 27929908 - TMPO chr12 98938008 + Exonic hg19 GBM TCGA-19-0957-02A 2 0 5'UTR-CDS Inter-chr p35.3 Transcription factor q23.1 Seq+ 29047 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP20-ACP1 ARHGAP20 chr11 110477285 - ACP1 chr2 271866 + Exonic hg19 GBM TCGA-19-0957-02A 2 0 In-Frame Inter-chr q23.1 p25.3 29048 ChimerSeq STARFusion TCGA_RNA-Seq LOC728190-CADM1 LOC728190 chr10 89096543 - CADM1 chr11 115111140 - Exonic hg19 GBM TCGA-19-0957-02A 2 0 3'UTR-CDS Inter-chr q23.3 Tumor suppressor gene 29049 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-19-0957-02A 2 0 In-Frame Intra-chr q13 Tumor suppressor gene q13 29050 ChimerSeq STARFusion TCGA_RNA-Seq PPM1B-TAF15 PPM1B chr2 44396413 + TAF15 chr17 34161570 + Exonic hg19 GBM TCGA-19-0957-02A 2 0 5'UTR-CDS Inter-chr p21 q12 29051 ChimerSeq STARFusion TCGA_RNA-Seq SGCB-C14orf101 SGCB chr4 52894134 - C14orf101 chr14 57101617 + Exonic hg19 GBM TCGA-19-0957-02A 2 0 Out-of-frame Inter-chr q12 29052 ChimerSeq STARFusion TCGA_RNA-Seq SPIN1-CASQ2 SPIN1 chr9 91003453 + CASQ2 chr1 116287533 - Exonic hg19 GBM TCGA-19-0957-02A 2 0 5'UTR-CDS Inter-chr q22.1 p13.1 29053 ChimerSeq STARFusion TCGA_RNA-Seq TCFL5-KDM3B TCFL5 chr20 61485368 - KDM3B chr5 137717205 + Exonic hg19 GBM TCGA-19-0957-02A 2 0 In-Frame Inter-chr q13.33 Transcription factor q31.2 Tumor suppressor gene 29054 ChimerSeq STARFusion TCGA_RNA-Seq PGD-CAMTA1 PGD chr1 10459761 + CAMTA1 chr1 7309551 + Exonic hg19 GBM TCGA-06-0190-01A 12 5 Out-of-frame Intra-chr p36.22 p36.31 Tumor suppressor gene Transcription factor Seq+ 29055 ChimerSeq STARFusion TCGA_RNA-Seq PEX14-CLP1 PEX14 chr1 10555378 + CLP1 chr11 57426927 + Exonic hg19 GBM TCGA-06-0190-01A 5 0 CDS-5'UTR Inter-chr p36.22 q12.1 Seq+ 29056 ChimerSeq STARFusion TCGA_RNA-Seq PIAS4-GLYATL2 PIAS4 chr19 4029034 + GLYATL2 chr11 58611997 - Exonic hg19 GBM TCGA-06-0190-01A 4 1 CDS-5'UTR Inter-chr p13.3 q12.1 Seq+ 29057 ChimerSeq STARFusion TCGA_RNA-Seq MED13-EPHB2 MED13 chr17 60061945 - EPHB2 chr1 23037459 + Exonic hg19 GBM TCGA-06-0190-01A 3 1 Out-of-frame Inter-chr q23.2 p36.12 Tumor suppressor gene Seq+ 29058 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-MRI1 ZSWIM4 chr19 13906615 + MRI1 chr19 13879375 + Exonic hg19 GBM TCGA-06-0190-01A 2 1 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 29059 ChimerSeq STARFusion TCGA_RNA-Seq COL4A5-PAFAH1B1 COL4A5 chrX 107840798 + PAFAH1B1 chr17 2585023 + Exonic hg19 GBM TCGA-06-0190-01A 2 0 Out-of-frame Inter-chr q22.3 p13.3 Tumor suppressor gene 29060 ChimerSeq STARFusion TCGA_RNA-Seq XRN1-SMYD3 XRN1 chr3 142166712 - SMYD3 chr1 246093239 - Exonic hg19 GBM TCGA-14-1402-02A 21 30 In-Frame Inter-chr q23 q44 Transcription factor Seq+ 29061 ChimerSeq STARFusion TCGA_RNA-Seq GNG7-SGTA GNG7 chr19 2702644 - SGTA chr19 2769089 - Exonic hg19 GBM TCGA-14-1402-02A 20 1 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 29062 ChimerSeq STARFusion TCGA_RNA-Seq IRAK2-BRK1 IRAK2 chr3 10264515 + BRK1 chr3 10167310 + Exonic hg19 GBM TCGA-14-1402-02A 12 9 Out-of-frame Intra-chr p25.3 TKL:IRAK p25.3 Seq+ 29063 ChimerSeq STARFusion TCGA_RNA-Seq FCGRT-BCAT2 FCGRT chr19 50017743 + BCAT2 chr19 49303554 - Exonic hg19 GBM TCGA-14-1402-02A 9 7 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 29064 ChimerSeq STARFusion TCGA_RNA-Seq RHEB-PRKAG2 RHEB chr7 151216546 - PRKAG2 chr7 151372723 - Exonic hg19 GBM TCGA-14-1402-02A 5 4 In-Frame Intra-chr q36.1 Oncogene q36.1 Seq+ 29065 ChimerSeq STARFusion TCGA_RNA-Seq SLC22A3-ZDHHC14 SLC22A3 chr6 160829953 + ZDHHC14 chr6 157963617 + Exonic hg19 GBM TCGA-14-1402-02A 5 3 In-Frame Intra-chr q25.3 q25.3 Seq+ 29066 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-14-1402-02A 3 2 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 29067 ChimerSeq STARFusion TCGA_RNA-Seq PDE10A-ZNF695 PDE10A chr6 166075435 - ZNF695 chr1 247109129 - Exonic hg19 GBM TCGA-14-1402-02A 3 2 Out-of-frame Inter-chr q27 q44 Transcription factor Seq+ 29068 ChimerSeq STARFusion TCGA_RNA-Seq LOC100507266-MSX1 LOC100507266 chr4 4651269 + MSX1 chr4 4864428 + Exonic hg19 GBM TCGA-14-1402-02A 3 1 5'UTR-CDS Intra-chr p16.2 Transcription factor 29069 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC14-NOX3 ZDHHC14 chr6 158014178 + NOX3 chr6 155732494 - Exonic hg19 GBM TCGA-14-1402-02A 2 5 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 29070 ChimerSeq STARFusion TCGA_RNA-Seq PLCB1-TMEM230 PLCB1 chr20 8131018 + TMEM230 chr20 5090091 - Exonic hg19 GBM TCGA-14-1402-02A 3 0 In-Frame Intra-chr p12.3 p12.3 29071 ChimerSeq STARFusion TCGA_RNA-Seq SLC22A3-ZDHHC14 SLC22A3 chr6 160828227 + ZDHHC14 chr6 157963617 + Exonic hg19 GBM TCGA-14-1402-02A 2 3 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 29072 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R9A-CYP3A43 PPP1R9A chr7 94540820 + CYP3A43 chr7 99454456 + Exonic hg19 GBM TCGA-14-1402-02A 2 2 In-Frame Intra-chr q21.3 q22.1 Seq+ 29073 ChimerSeq STARFusion TCGA_RNA-Seq APC2-MPHOSPH8 APC2 chr19 1462176 + MPHOSPH8 chr13 20245346 + Exonic hg19 GBM TCGA-14-1402-02A 2 0 Out-of-frame Inter-chr p13.3 q12.11 29074 ChimerSeq STARFusion TCGA_RNA-Seq BEST1-FTH1 BEST1 chr11 61724936 + FTH1 chr11 61732987 - Exonic hg19 GBM TCGA-14-1402-02A 2 0 In-Frame Intra-chr q12.3 q12.3 29075 ChimerSeq STARFusion TCGA_RNA-Seq CACFD1-MX1 CACFD1 chr9 136330569 + MX1 chr21 42821064 + Exonic hg19 GBM TCGA-14-1402-02A 2 0 Out-of-frame Inter-chr q22.3 29076 ChimerSeq STARFusion TCGA_RNA-Seq EZR-EFCAB2 EZR chr6 159239114 - EFCAB2 chr1 245222688 + Exonic hg19 GBM TCGA-14-1402-02A 2 0 Out-of-frame Inter-chr q25.3 q44 29077 ChimerSeq STARFusion TCGA_RNA-Seq FGF1-RAP1B FGF1 chr5 142065522 - RAP1B chr12 69047892 + Exonic hg19 GBM TCGA-14-1402-02A 2 0 5'UTR-CDS Inter-chr q31.3 q15 29078 ChimerSeq STARFusion TCGA_RNA-Seq HERC2-CYFIP1 HERC2 chr15 28491027 - CYFIP1 chr15 23002876 + Exonic hg19 GBM TCGA-14-1402-02A 2 0 Out-of-frame Intra-chr q11.2 29079 ChimerSeq STARFusion TCGA_RNA-Seq HMGN3-NDUFB4 HMGN3 chr6 79944263 - NDUFB4 chr3 120319958 + Exonic hg19 GBM TCGA-14-1402-02A 2 0 In-Frame Inter-chr q14.1 Transcription factor q13.33 Seq+ 29080 ChimerSeq STARFusion TCGA_RNA-Seq KRBOX1-FAM198A KRBOX1 chr3 42983563 + FAM198A chr3 43095013 + Exonic hg19 GBM TCGA-14-1402-02A 2 0 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 29081 ChimerSeq STARFusion TCGA_RNA-Seq LSM7-TRIP13 LSM7 chr19 2324124 - TRIP13 chr5 914580 + Exonic hg19 GBM TCGA-14-1402-02A 2 0 Out-of-frame Inter-chr p13.3 p15.33 29082 ChimerSeq STARFusion TCGA_RNA-Seq MED26-LMF1 MED26 chr19 16738683 - LMF1 chr16 904706 - Exonic hg19 GBM TCGA-14-1402-02A 2 0 Out-of-frame Inter-chr p13.11 p13.3 29083 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-14-1402-02A 2 0 5'UTR-CDS Intra-chr q13 q13 29084 ChimerSeq STARFusion TCGA_RNA-Seq NID1-HDAC5 NID1 chr1 236148679 - HDAC5 chr17 42156645 - Exonic hg19 GBM TCGA-14-1402-02A 2 0 In-Frame Inter-chr q42.3 q21.31 29085 ChimerSeq STARFusion TCGA_RNA-Seq PLOD1-SDCCAG3 PLOD1 chr1 12012792 + SDCCAG3 chr9 139299145 - Exonic hg19 GBM TCGA-14-1402-02A 2 0 In-Frame Inter-chr p36.22 q34.3 29086 ChimerSeq STARFusion TCGA_RNA-Seq PPP3CA-PIBF1 PPP3CA chr4 102267896 - PIBF1 chr13 73428195 + Exonic hg19 GBM TCGA-14-1402-02A 2 0 Out-of-frame Inter-chr q24 q21.33 29087 ChimerSeq STARFusion TCGA_RNA-Seq PRMT2-PKM PRMT2 chr21 48078832 + PKM chr15 72511451 - Exonic hg19 GBM TCGA-14-1402-02A 2 0 Out-of-frame Inter-chr q22.3 q23 29088 ChimerSeq STARFusion TCGA_RNA-Seq RPL30-GOLIM4 RPL30 chr8 99054873 - GOLIM4 chr3 167728611 - Exonic hg19 GBM TCGA-14-1402-02A 2 0 Out-of-frame Inter-chr q22.2 q26.2 29089 ChimerSeq STARFusion TCGA_RNA-Seq SALL2-FERMT2 SALL2 chr14 22004983 - FERMT2 chr14 53360145 - Exonic hg19 GBM TCGA-14-1402-02A 2 0 In-Frame Intra-chr q11.2 Tumor suppressor gene Transcription factor q22.1 29090 ChimerSeq STARFusion TCGA_RNA-Seq SEC31A-HNRPDL SEC31A chr4 83799883 - HNRPDL chr4 83348717 - Exonic hg19 GBM TCGA-14-1402-02A 2 0 In-Frame Intra-chr q21.22 29091 ChimerSeq STARFusion TCGA_RNA-Seq SEC61G-LANCL2 SEC61G chr7 54825188 - LANCL2 chr7 55492947 + Exonic hg19 GBM TCGA-14-1402-02A 2 0 Out-of-frame Intra-chr p11.2 p11.2 29092 ChimerSeq STARFusion TCGA_RNA-Seq SFT2D1-LPA SFT2D1 chr6 166755907 - LPA chr6 160963840 - Exonic hg19 GBM TCGA-14-1402-02A 2 0 Out-of-frame Intra-chr q27 q26 29093 ChimerSeq STARFusion TCGA_RNA-Seq SHROOM3-CCNI SHROOM3 chr4 77357373 + CCNI chr4 77987558 - Exonic hg19 GBM TCGA-14-1402-02A 2 0 CDS-5'UTR Intra-chr q21.1 q21.1 29094 ChimerSeq STARFusion TCGA_RNA-Seq SNAP23-EIF2B5 SNAP23 chr15 42805645 + EIF2B5 chr3 183859713 + Exonic hg19 GBM TCGA-14-1402-02A 2 0 In-Frame Inter-chr q15.1 q27.1 29095 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-06-0749-01A 3 0 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 29096 ChimerSeq STARFusion TCGA_RNA-Seq GNB4-OPA1 GNB4 chr3 179169134 - OPA1 chr3 193409852 + Exonic hg19 GBM TCGA-06-0749-01A 2 0 5'UTR-CDS Intra-chr q26.33 q29 29097 ChimerSeq STARFusion TCGA_RNA-Seq OR51B5-HBG1 OR51B5 chr11 5526799 - HBG1 chr11 5270820 - Exonic hg19 GBM TCGA-06-0749-01A 2 0 5'UTR-CDS Intra-chr p15.4 p15.4 Seq+ 29098 ChimerSeq STARFusion TCGA_RNA-Seq TLE4-HDAC5 TLE4 chr9 82320857 + HDAC5 chr17 42165064 - Exonic hg19 GBM TCGA-06-0749-01A 2 0 In-Frame Inter-chr q21.31 q21.31 29099 ChimerSeq STARFusion TCGA_RNA-Seq SPRED2-LOC339807 SPRED2 chr2 65659096 - LOC339807 chr2 64842388 + Exonic hg19 GBM TCGA-06-2561-01A 9 1 CDS-5'UTR Intra-chr p14 29100 ChimerSeq STARFusion TCGA_RNA-Seq LRP5-ATG16L2 LRP5 chr11 68207384 + ATG16L2 chr11 72539404 + Exonic hg19 GBM TCGA-06-2561-01A 6 6 Out-of-frame Intra-chr q13.2 q13.4 Seq+ 29101 ChimerSeq STARFusion TCGA_RNA-Seq CEP170-C1orf100 CEP170 chr1 243349561 - C1orf100 chr1 244527990 + Exonic hg19 GBM TCGA-06-2561-01A 5 4 CDS-5'UTR Intra-chr q44 Seq+ 29102 ChimerSeq STARFusion TCGA_RNA-Seq MFSD6-CALCRL MFSD6 chr2 191302287 + CALCRL chr2 188228229 - Exonic hg19 GBM TCGA-06-2561-01A 5 4 In-Frame Intra-chr q32.2 q32.1 Seq+ 29103 ChimerSeq STARFusion TCGA_RNA-Seq CEP170-C1orf100 CEP170 chr1 243349081 - C1orf100 chr1 244527990 + Exonic hg19 GBM TCGA-06-2561-01A 2 4 CDS-5'UTR Intra-chr q44 Seq+ 29104 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-SRP72 CPSF6 chr12 69633486 + SRP72 chr4 57366702 + Exonic hg19 GBM TCGA-06-2561-01A 2 0 Out-of-frame Inter-chr q15 q12 29105 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-06-2561-01A 2 0 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 29106 ChimerSeq STARFusion TCGA_RNA-Seq FOXO3-LETMD1 FOXO3 chr6 108883032 + LETMD1 chr12 51442817 + Exonic hg19 GBM TCGA-06-2561-01A 2 0 Out-of-frame Inter-chr q21 Oncogene Tumor suppressor gene Transcription factor q13.12 29107 ChimerSeq STARFusion TCGA_RNA-Seq MLL3-DLEU2 MLL3 chr7 151851095 - DLEU2 chr13 50618904 - Exonic hg19 GBM TCGA-06-2561-01A 2 0 CDS-3'UTR Inter-chr Tumor suppressor gene q14.2 Tumor suppressor gene 29108 ChimerSeq STARFusion TCGA_RNA-Seq PTGR2-NDUFAF1 PTGR2 chr14 74327360 + NDUFAF1 chr15 41680720 - Exonic hg19 GBM TCGA-06-2561-01A 2 0 In-Frame Inter-chr q24.3 q15.1 29109 ChimerSeq STARFusion TCGA_RNA-Seq SMU1-BAG1 SMU1 chr9 33060463 - BAG1 chr9 33259031 - Exonic hg19 GBM TCGA-06-2561-01A 2 0 In-Frame Intra-chr p21.1 p13.3 29110 ChimerSeq STARFusion TCGA_RNA-Seq SCFD2-GSX2 SCFD2 chr4 54218765 - GSX2 chr4 54967749 + Exonic hg19 GBM TCGA-76-4928-01B 13 7 Out-of-frame Intra-chr q12 q12 Transcription factor Seq+ 29111 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT2A MT1L chr16 56652156 + MT2A chr16 56643175 + Exonic hg19 GBM TCGA-76-4928-01B 3 0 5'UTR-CDS Intra-chr q13 q13 Tumor suppressor gene 29112 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642595 + MT3 chr16 56623782 + Exonic hg19 GBM TCGA-76-4928-01B 2 4 In-Frame Intra-chr q13 Tumor suppressor gene q13 29113 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-76-4928-01B 2 1 5'UTR-CDS Intra-chr q13 q13 29114 ChimerSeq STARFusion TCGA_RNA-Seq DICER1-GNL3 DICER1 chr14 95590533 - GNL3 chr3 52726888 + Exonic hg19 GBM TCGA-76-4928-01B 2 0 In-Frame Inter-chr q32.13 Oncogene Tumor suppressor gene p21.1 29115 ChimerSeq STARFusion TCGA_RNA-Seq PTPRZ1-RCHY1 PTPRZ1 chr7 121671613 + RCHY1 chr4 76407876 - Exonic hg19 GBM TCGA-76-4928-01B 2 0 In-Frame Inter-chr q31.32 q21.1 Tumor suppressor gene 29116 ChimerSeq STARFusion TCGA_RNA-Seq NFASC-LRRN2 NFASC chr1 204797910 + LRRN2 chr1 204589346 - Exonic hg19 GBM TCGA-27-1834-01A 15 11 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 29117 ChimerSeq STARFusion TCGA_RNA-Seq NFASC-LRRN2 NFASC chr1 204797910 + LRRN2 chr1 204602374 - Exonic hg19 GBM TCGA-27-1834-01A 5 11 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 29118 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-27-1834-01A 6 0 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 29119 ChimerSeq STARFusion TCGA_RNA-Seq KNTC1-AARS KNTC1 chr12 123060446 + AARS chr16 70293089 - Exonic hg19 GBM TCGA-27-1834-01A 2 0 In-Frame Inter-chr q24.31 q22.1 29120 ChimerSeq STARFusion TCGA_RNA-Seq CHD7-TOX CHD7 chr8 61655656 + TOX chr8 59872567 - Exonic hg19 GBM TCGA-06-5414-01A 18 8 In-Frame Intra-chr q12.2 q12.1 Seq+ 29121 ChimerSeq STARFusion TCGA_RNA-Seq NNMT-RBM7 NNMT chr11 114168880 + RBM7 chr11 114272420 + Exonic hg19 GBM TCGA-06-5414-01A 4 2 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 29122 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-06-5414-01A 4 1 5'UTR-CDS Intra-chr q13 q13 29123 ChimerSeq STARFusion TCGA_RNA-Seq ZMYM4-MANEAL ZMYM4 chr1 35791006 + MANEAL chr1 38261409 + Exonic hg19 GBM TCGA-06-5414-01A 2 1 In-Frame Intra-chr p34.3 p34.3 29124 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT5-BTBD3 AGPAT5 chr8 6566408 + BTBD3 chr20 11898982 + Exonic hg19 GBM TCGA-06-5414-01A 2 0 CDS-5'UTR Inter-chr p23.1 p12.2 29125 ChimerSeq STARFusion TCGA_RNA-Seq RASSF8-SSPN RASSF8 chr12 26208379 + SSPN chr12 26377226 + Exonic hg19 GBM TCGA-06-5414-01A 2 0 Out-of-frame Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 29126 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K13-CD37 MAP3K13 chr3 185003431 + CD37 chr19 49840166 + Exonic hg19 GBM TCGA-06-5859-01A 32 13 Out-of-frame Inter-chr q27.2 q13.33 Seq+ 29127 ChimerSeq STARFusion TCGA_RNA-Seq SMAD4-RAX SMAD4 chr18 48586286 + RAX chr18 56936733 - Exonic hg19 GBM TCGA-06-5859-01A 10 4 Out-of-frame Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q21.32 Transcription factor Seq+ 29128 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-LOC100506844 TSFM chr12 58180945 + LOC100506844 chr12 58329336 - Exonic hg19 GBM TCGA-06-5859-01A 6 3 CDS-3'UTR Intra-chr q14.1 29129 ChimerSeq STARFusion TCGA_RNA-Seq DDIT3-GLI1 DDIT3 chr12 57914201 - GLI1 chr12 57857448 + Exonic hg19 GBM TCGA-06-5859-01A 4 9 5'UTR-5'UTR Intra-chr q13.3 Oncogene Transcription factor q13.3 Tumor suppressor gene Transcription factor Seq+ 29130 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-06-5859-01A 5 3 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 29131 ChimerSeq STARFusion TCGA_RNA-Seq DDIT3-GLI1 DDIT3 chr12 57914199 - GLI1 chr12 57858458 + Exonic hg19 GBM TCGA-06-5859-01A 3 9 Out-of-frame Intra-chr q13.3 Oncogene Transcription factor q13.3 Tumor suppressor gene Transcription factor Seq+ 29132 ChimerSeq STARFusion TCGA_RNA-Seq DDIT3-GLI1 DDIT3 chr12 57914203 - GLI1 chr12 57857446 + Exonic hg19 GBM TCGA-06-5859-01A 3 9 Out-of-frame Intra-chr q13.3 Oncogene Transcription factor q13.3 Tumor suppressor gene Transcription factor Seq+ 29133 ChimerSeq STARFusion TCGA_RNA-Seq TCHH-GFAP TCHH chr1 152084652 - GFAP chr17 42988825 - Exonic hg19 GBM TCGA-06-5859-01A 4 0 Out-of-frame Inter-chr q21.3 q21.31 29134 ChimerSeq STARFusion TCGA_RNA-Seq PDE4DIP-GCNT7 PDE4DIP chr1 145021112 - GCNT7 chr20 55079350 - Exonic hg19 GBM TCGA-06-5859-01A 3 1 CDS-5'UTR Inter-chr q21.2 Oncogene q13.31 29135 ChimerSeq STARFusion TCGA_RNA-Seq GLI1-DCTN2 GLI1 chr12 57853984 + DCTN2 chr12 57929628 - Exonic hg19 GBM TCGA-06-5859-01A 3 0 5'UTR-CDS Intra-chr q13.3 Tumor suppressor gene Transcription factor q13.3 Seq+ 29136 ChimerSeq STARFusion TCGA_RNA-Seq DCTN2-GLI1 DCTN2 chr12 57939811 - GLI1 chr12 57857448 + Exonic hg19 GBM TCGA-06-5859-01A 2 1 CDS-5'UTR Intra-chr q13.3 q13.3 Tumor suppressor gene Transcription factor 29137 ChimerSeq STARFusion TCGA_RNA-Seq APOL2-TMEM131 APOL2 chr22 36635487 - TMEM131 chr2 98392481 - Exonic hg19 GBM TCGA-06-5859-01A 2 0 5'UTR-CDS Inter-chr q12.3 q11.2 29138 ChimerSeq STARFusion TCGA_RNA-Seq LRP4-SQSTM1 LRP4 chr11 46920109 - SQSTM1 chr5 179263436 + Exonic hg19 GBM TCGA-06-5859-01A 2 0 In-Frame Inter-chr p11.2 q35.3 29139 ChimerSeq STARFusion TCGA_RNA-Seq KLHL7-BRAF KLHL7 chr7 23165418 + BRAF chr7 140482957 - Exonic hg19 GBM TCGA-28-5218-01A 7 3 Out-of-frame Intra-chr p15.3 q34 TKL:RAF Oncogene Seq+ 29140 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 GBM TCGA-28-5218-01A 2 1 CDS-5'UTR Intra-chr p12 p12 Transcription factor 29141 ChimerSeq STARFusion TCGA_RNA-Seq DOCK4-IMMP2L DOCK4 chr7 111846157 - IMMP2L chr7 110603621 - Exonic hg19 GBM TCGA-06-5408-01A 4 0 Out-of-frame Intra-chr q31.1 q31.1 KB Pub Seq+ 29142 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-06-5408-01A 3 1 In-Frame Intra-chr q13 Tumor suppressor gene q13 29143 ChimerSeq STARFusion TCGA_RNA-Seq NSD1-PARK2 NSD1 chr5 176675325 + PARK2 chr6 161990448 - Exonic hg19 GBM TCGA-06-5408-01A 3 1 Out-of-frame Inter-chr q35.3 Oncogene Tumor suppressor gene Seq+ 29144 ChimerSeq STARFusion TCGA_RNA-Seq PIAS2-ST8SIA5 PIAS2 chr18 44407922 - ST8SIA5 chr18 44272218 - Exonic hg19 GBM TCGA-06-5408-01A 2 1 In-Frame Intra-chr q21.1 q21.1 Seq+ 29145 ChimerSeq STARFusion TCGA_RNA-Seq DCP2-NNT DCP2 chr5 112312683 + NNT chr5 43675613 + Exonic hg19 GBM TCGA-06-5408-01A 2 0 Out-of-frame Intra-chr q22.2 p12 29146 ChimerSeq STARFusion TCGA_RNA-Seq HOPX-IGFBP7 HOPX chr4 57547421 - IGFBP7 chr4 57907099 - Exonic hg19 GBM TCGA-28-5216-01A 5 1 5'UTR-CDS Intra-chr q12 Tumor suppressor gene q12 Tumor suppressor gene Seq+ 29147 ChimerSeq STARFusion TCGA_RNA-Seq PDGFRA-GRID2 PDGFRA chr4 55095582 + GRID2 chr4 93511282 + Exonic hg19 GBM TCGA-28-5216-01A 4 0 5'UTR-CDS Intra-chr q12 Oncogene q22.1 Seq+ 29148 ChimerSeq STARFusion TCGA_RNA-Seq ITGA9-POPDC2 ITGA9 chr3 37560845 + POPDC2 chr3 119361408 - Exonic hg19 GBM TCGA-28-5216-01A 3 3 Out-of-frame Intra-chr p22.2 Oncogene q13.33 Seq+ 29149 ChimerSeq STARFusion TCGA_RNA-Seq CDK14-GATAD1 CDK14 chr7 90547039 + GATAD1 chr7 92078066 + Exonic hg19 GBM TCGA-28-5216-01A 2 2 Out-of-frame Intra-chr q21.13 q21.2 Seq+ 29150 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-OMA1 GNB1 chr1 1724684 - OMA1 chr1 58946846 - Exonic hg19 GBM TCGA-28-5216-01A 2 2 Out-of-frame Intra-chr p36.33 p32.1 Seq+ 29151 ChimerSeq STARFusion TCGA_RNA-Seq ARVCF-TBC1D22A ARVCF chr22 19964938 - TBC1D22A chr22 47432967 + Exonic hg19 GBM TCGA-28-5216-01A 2 0 In-Frame Intra-chr q11.21 q13.31 29152 ChimerSeq STARFusion TCGA_RNA-Seq DENND1A-PSMB7 DENND1A chr9 126519982 - PSMB7 chr9 127119194 - Exonic hg19 GBM TCGA-28-5216-01A 2 0 Out-of-frame Intra-chr q33.3 q33.3 Seq+ 29153 ChimerSeq STARFusion TCGA_RNA-Seq LOC645513-PDXK LOC645513 chr4 120376288 + PDXK chr21 45153950 + Exonic hg19 GBM TCGA-28-5216-01A 2 0 5'UTR-CDS Inter-chr q22.3 29154 ChimerSeq STARFusion TCGA_RNA-Seq RNF115-PDZK1 RNF115 chr1 145611341 + PDZK1 chr1 145747042 + Exonic hg19 GBM TCGA-28-5216-01A 2 0 CDS-5'UTR Intra-chr q21.1 q21.1 Seq+ 29155 ChimerSeq STARFusion TCGA_RNA-Seq ST3GAL5-POLR1A ST3GAL5 chr2 86088304 - POLR1A chr2 86274386 - Exonic hg19 GBM TCGA-28-5216-01A 2 0 In-Frame Intra-chr p11.2 p11.2 29156 ChimerSeq STARFusion TCGA_RNA-Seq WDR67-C22orf23 WDR67 chr8 124157095 + C22orf23 chr22 38343470 - Exonic hg19 GBM TCGA-28-5216-01A 2 0 In-Frame Inter-chr q13.1 29157 ChimerSeq STARFusion TCGA_RNA-Seq ITM2B-RB1 ITM2B chr13 48830519 + RB1 chr13 49027129 + Exonic hg19 GBM TCGA-19-1389-02A 4 3 In-Frame Intra-chr q14.2 q14.2 Oncogene Tumor suppressor gene Seq+ 29158 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-19-1389-02A 2 0 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 29159 ChimerSeq STARFusion TCGA_RNA-Seq GNPDA2-SQSTM1 GNPDA2 chr4 44728491 - SQSTM1 chr5 179249958 + Exonic hg19 GBM TCGA-19-1389-02A 2 0 5'UTR-5'UTR Inter-chr p12 q35.3 29160 ChimerSeq STARFusion TCGA_RNA-Seq KLF7-APLP2 KLF7 chr2 208030191 - APLP2 chr11 129979324 + Exonic hg19 GBM TCGA-19-1389-02A 2 0 In-Frame Inter-chr q33.3 Transcription factor q24.3 29161 ChimerSeq STARFusion TCGA_RNA-Seq LOC400927-IMMP1L LOC400927 chr22 38757404 - IMMP1L chr11 31455117 - Exonic hg19 GBM TCGA-19-1389-02A 2 0 3'UTR-CDS Inter-chr p13 29162 ChimerSeq STARFusion TCGA_RNA-Seq ATG4B-DTYMK ATG4B chr2 242590750 + DTYMK chr2 242615652 - Exonic hg19 GBM TCGA-32-2615-01A 96 62 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 29163 ChimerSeq STARFusion TCGA_RNA-Seq KRIT1-GNGT1 KRIT1 chr7 91866981 - GNGT1 chr7 93536048 + Exonic hg19 GBM TCGA-32-2615-01A 52 42 CDS-5'UTR Intra-chr q21.2 Tumor suppressor gene q21.3 Seq+ 29164 ChimerSeq STARFusion TCGA_RNA-Seq KRIT1-GNGT1 KRIT1 chr7 91866981 - GNGT1 chr7 93536051 + Exonic hg19 GBM TCGA-32-2615-01A 25 42 CDS-5'UTR Intra-chr q21.2 Tumor suppressor gene q21.3 Seq+ 29165 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R9A-ANKIB1 PPP1R9A chr7 94827796 + ANKIB1 chr7 91924203 + Exonic hg19 GBM TCGA-32-2615-01A 7 0 CDS-5'UTR Intra-chr q21.3 q21.2 29166 ChimerSeq STARFusion TCGA_RNA-Seq D2HGDH-ING5 D2HGDH chr2 242695429 + ING5 chr2 242662354 + Exonic hg19 GBM TCGA-32-2615-01A 5 5 Out-of-frame Intra-chr q37.3 q37.3 Tumor suppressor gene 29167 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-32-2615-01A 5 0 5'UTR-CDS Intra-chr q13 q13 29168 ChimerSeq STARFusion TCGA_RNA-Seq SCCPDH-HDLBP SCCPDH chr1 246903603 + HDLBP chr2 242169376 - Exonic hg19 GBM TCGA-32-2615-01A 4 3 Out-of-frame Inter-chr q44 q37.3 29169 ChimerSeq STARFusion TCGA_RNA-Seq MPLKIP-POLR2J4 MPLKIP chr7 40173828 - POLR2J4 chr7 44027846 - Exonic hg19 GBM TCGA-32-2615-01A 4 1 CDS-3'UTR Intra-chr p14.1 p13 29170 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-32-2615-01A 2 1 In-Frame Intra-chr q13 Tumor suppressor gene q13 29171 ChimerSeq STARFusion TCGA_RNA-Seq ATG4B-GAL3ST2 ATG4B chr2 242590750 + GAL3ST2 chr2 242738480 + Exonic hg19 GBM TCGA-32-2615-01A 2 0 Out-of-frame Intra-chr q37.3 29172 ChimerSeq STARFusion TCGA_RNA-Seq MT1DP-MT3 MT1DP chr16 56678088 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-32-2615-01A 2 0 5'UTR-CDS Intra-chr q13 Tumor suppressor gene q13 29173 ChimerSeq STARFusion TCGA_RNA-Seq RAB11B-PHF1 RAB11B chr19 8455340 + PHF1 chr6_ssto_hap7 4862502 + Exonic hg19 GBM TCGA-32-2615-01A 2 0 CDS-5'UTR Inter-chr p13.2 Transcription factor 29174 ChimerSeq STARFusion TCGA_RNA-Seq SYNPO-UBB SYNPO chr5 149998329 + UBB chr17 16285216 + Exonic hg19 GBM TCGA-32-2615-01A 2 0 CDS-5'UTR Inter-chr q33.1 p11.2 29175 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 GBM TCGA-32-2615-01A 2 0 CDS-5'UTR Intra-chr p12 p12 Transcription factor 29176 ChimerSeq STARFusion TCGA_RNA-Seq GIGYF2-ECEL1 GIGYF2 chr2 233562102 + ECEL1 chr2 233345866 - Exonic hg19 GBM TCGA-06-0141-01A 84 4 5'UTR-CDS Intra-chr q37.1 q37.1 Seq+ 29177 ChimerSeq STARFusion TCGA_RNA-Seq GBAP1-CABIN1 GBAP1 chr1 155186175 - CABIN1 chr22 24574329 + Exonic hg19 GBM TCGA-06-0141-01A 45 25 3'UTR-3'UTR Inter-chr q22 Seq+ 29178 ChimerSeq STARFusion TCGA_RNA-Seq DPF2-POLA2 DPF2 chr11 65113830 + POLA2 chr11 65049950 + Exonic hg19 GBM TCGA-06-0141-01A 25 12 In-Frame Intra-chr q13.1 q13.1 Seq+ 29179 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-RARA TAOK1 chr17 27718042 + RARA chr17 38504568 + Exonic hg19 GBM TCGA-06-0141-01A 10 4 5'UTR-CDS Intra-chr q11.2 q21.2 Oncogene Transcription factor Seq+ 29180 ChimerSeq STARFusion TCGA_RNA-Seq MTF1-SF3A3 MTF1 chr1 38322923 - SF3A3 chr1 38453508 - Exonic hg19 GBM TCGA-06-0141-01A 8 4 In-Frame Intra-chr p34.3 Transcription factor p34.3 Seq+ 29181 ChimerSeq STARFusion TCGA_RNA-Seq SPECC1L-SNUPN SPECC1L chr22 24666951 + SNUPN chr15 75918712 - Exonic hg19 GBM TCGA-06-0141-01A 6 6 5'UTR-5'UTR Inter-chr q11.23 q24.2 Seq+ 29182 ChimerSeq STARFusion TCGA_RNA-Seq LOC595101-DCTPP1 LOC595101 chr16 30346296 - DCTPP1 chr16 30435854 - Exonic hg19 GBM TCGA-06-0141-01A 4 4 3'UTR-CDS Intra-chr p11.2 29183 ChimerSeq STARFusion TCGA_RNA-Seq HBA2-PCBP4 HBA2 chr16 223631 + PCBP4 chr3 51991704 - Exonic hg19 GBM TCGA-06-0141-01A 4 3 Out-of-frame Inter-chr p13.3 p21.2 Seq+ 29184 ChimerSeq STARFusion TCGA_RNA-Seq FTL-C1QB FTL chr19 49469918 + C1QB chr1 22986051 + Exonic hg19 GBM TCGA-06-0141-01A 4 1 Out-of-frame Inter-chr q13.33 p36.12 29185 ChimerSeq STARFusion TCGA_RNA-Seq GBA-CABIN1 GBA chr1 155207132 - CABIN1 chr22 24574329 + Exonic hg19 GBM TCGA-06-0141-01A 3 4 CDS-3'UTR Inter-chr 29186 ChimerSeq STARFusion TCGA_RNA-Seq TCHH-GFAP TCHH chr1 152084650 - GFAP chr17 42988823 - Exonic hg19 GBM TCGA-06-0141-01A 4 0 Out-of-frame Inter-chr q21.3 q21.31 29187 ChimerSeq STARFusion TCGA_RNA-Seq PTPN9-ASH1L PTPN9 chr15 75871055 - ASH1L chr1 155324421 - Exonic hg19 GBM TCGA-06-0141-01A 3 1 Out-of-frame Inter-chr q24.2 q22 Transcription factor Seq+ 29188 ChimerSeq STARFusion TCGA_RNA-Seq C7orf50-PGPEP1 C7orf50 chr7 1166893 - PGPEP1 chr19 18466705 + Exonic hg19 GBM TCGA-06-0141-01A 3 0 In-Frame Inter-chr p22.3 p13.11 29189 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-KRT14 FBXL20 chr17 37557614 - KRT14 chr17 39742690 - Exonic hg19 GBM TCGA-06-0141-01A 3 0 Out-of-frame Intra-chr q12 q21.2 29190 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-KRT14 FBXL20 chr17 37557614 - KRT14 chr17 39742745 - Exonic hg19 GBM TCGA-06-0141-01A 3 0 Out-of-frame Intra-chr q12 q21.2 29191 ChimerSeq STARFusion TCGA_RNA-Seq MT1A-MT3 MT1A chr16 56673189 + MT3 chr16 56623444 + Exonic hg19 GBM TCGA-06-0141-01A 3 0 Out-of-frame Intra-chr q13 q13 29192 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT3 MT1L chr16 56652156 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-06-0141-01A 3 0 5'UTR-CDS Intra-chr q13 q13 29193 ChimerSeq STARFusion TCGA_RNA-Seq MT2A-MT3 MT2A chr16 56642969 + MT3 chr16 56624752 + Exonic hg19 GBM TCGA-06-0141-01A 2 1 In-Frame Intra-chr q13 Tumor suppressor gene q13 29194 ChimerSeq STARFusion TCGA_RNA-Seq BAZ2B-MARCH7 BAZ2B chr2 160181322 - 2019_ 3_ 7_ chr2 160585520 + Exonic hg19 GBM TCGA-06-0141-01A 2 0 Out-of-frame Intra-chr q24.2 Transcription factor q24.2 29195 ChimerSeq STARFusion TCGA_RNA-Seq CAPZB-NBL1 CAPZB chr1 19705034 - NBL1 chr1 19981505 + Exonic hg19 GBM TCGA-06-0141-01A 2 0 In-Frame Intra-chr p36.13 p36.13 29196 ChimerSeq STARFusion TCGA_RNA-Seq WSB1-GBP2 WSB1 chr17 25621461 + GBP2 chr1 89575949 - Exonic hg19 GBM TCGA-06-0141-01A 2 0 Out-of-frame Inter-chr q11.1 p22.2 29197 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-06-5858-01A 4 1 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 29198 ChimerSeq STARFusion TCGA_RNA-Seq PABPC1-RLIM PABPC1 chr8 101718993 - RLIM chrX 73803327 - Exonic hg19 GBM TCGA-06-5858-01A 3 0 Out-of-frame Inter-chr q22.3 q13.2 29199 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-LOC649395 YWHAE chr17 1268213 - LOC649395 chr7 63894406 + Exonic hg19 GBM TCGA-06-5858-01A 3 0 Out-of-frame Inter-chr p13.3 29200 ChimerSeq STARFusion TCGA_RNA-Seq PTPRZ1-GLUD1 PTPRZ1 chr7 121513611 + GLUD1 chr10 88836413 - Exonic hg19 GBM TCGA-06-5858-01A 2 0 In-Frame Inter-chr q31.32 q23.2 29201 ChimerSeq STARFusion TCGA_RNA-Seq RASSF8-SSPN RASSF8 chr12 26208379 + SSPN chr12 26377226 + Exonic hg19 GBM TCGA-06-5858-01A 2 0 Out-of-frame Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 29202 ChimerSeq STARFusion TCGA_RNA-Seq SEC61G-EGFR SEC61G chr7 54825188 - EGFR chr7 55224226 + Exonic hg19 GBM TCGA-06-0211-02A 574 479 In-Frame Intra-chr p11.2 p11.2 TK:EGFR Oncogene Seq+ 29203 ChimerSeq STARFusion TCGA_RNA-Seq CRTC1-KLHL26 CRTC1 chr19 18794638 + KLHL26 chr19 18775071 + Exonic hg19 GBM TCGA-06-0211-02A 16 6 Out-of-frame Intra-chr p13.11 Oncogene p13.11 Seq+ 29204 ChimerSeq STARFusion TCGA_RNA-Seq SHB-LINGO2 SHB chr9 38016008 - LINGO2 chr9 28372866 - Exonic hg19 GBM TCGA-06-0211-02A 4 4 CDS-5'UTR Intra-chr p13.1 p21.1 Seq+ 29205 ChimerSeq STARFusion TCGA_RNA-Seq SHB-LINGO2 SHB chr9 38016008 - LINGO2 chr9 27950704 - Exonic hg19 GBM TCGA-06-0211-02A 3 4 CDS-5'UTR Intra-chr p13.1 p21.1 Seq+ 29206 ChimerSeq STARFusion TCGA_RNA-Seq SGPP1-WDR89 SGPP1 chr14 64193979 - WDR89 chr14 64091751 - Exonic hg19 GBM TCGA-06-0211-02A 2 0 CDS-5'UTR Intra-chr q23.2 q23.2 29207 ChimerSeq STARFusion TCGA_RNA-Seq YEATS2-SEC62 YEATS2 chr3 183442319 + SEC62 chr3 169710382 + Exonic hg19 GBM TCGA-06-0219-01A 23 25 Out-of-frame Intra-chr q27.1 q26.2 29208 ChimerSeq STARFusion TCGA_RNA-Seq SRP68-URM1 SRP68 chr17 74039910 - URM1 chr9 131150095 + Exonic hg19 GBM TCGA-06-0219-01A 17 9 Out-of-frame Inter-chr q25.1 q34.11 Seq+ 29209 ChimerSeq STARFusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240783 + OPCML chr11 132812905 - Exonic hg19 GBM TCGA-06-0219-01A 2 3 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 29210 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-SEC61G EGFR chr7 55087058 + SEC61G chr7 54825287 - Exonic hg19 GBM TCGA-06-0219-01A 2 1 CDS-5'UTR Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 29211 ChimerSeq STARFusion TCGA_RNA-Seq GUSBP1-RAB10 GUSBP1 chr5 21461975 + RAB10 chr2 26321531 + Exonic hg19 GBM TCGA-06-0219-01A 2 0 5'UTR-CDS Inter-chr p14.3 p23.3 29212 ChimerSeq STARFusion TCGA_RNA-Seq MIER1-LGMN MIER1 chr1 67411978 + LGMN chr14 93172998 - Exonic hg19 GBM TCGA-06-0219-01A 2 0 In-Frame Inter-chr p31.3 q32.12 29213 ChimerSeq STARFusion TCGA_RNA-Seq VEZF1-CASP3 VEZF1 chr17 56057964 - CASP3 chr4 185550655 - Exonic hg19 GBM TCGA-06-0219-01A 2 0 In-Frame Inter-chr q22 Transcription factor q35.1 29214 ChimerSeq STARFusion TCGA_RNA-Seq ZNF736-FAM120B ZNF736 chr7 63797360 + FAM120B chr6 170704575 + Exonic hg19 GBM TCGA-06-0219-01A 2 0 In-Frame Inter-chr q11.21 Transcription factor 29215 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106111129 - Exonic hg19 HNSC TCGA-CV-7180 13 1 Out-of-frame Inter-chr q37.3 29216 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242532 + KRT14 chr17 39768618 - Exonic hg19 HNSC TCGA-CV-7180 5 12 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29217 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106136184 - Exonic hg19 HNSC TCGA-CV-7180 6 1 Out-of-frame Inter-chr q37.3 29218 ChimerSeq STARFusion TCGA_RNA-Seq ITGAL-KRT14 ITGAL chr16 30531249 + KRT14 chr17 39743147 - Exonic hg19 HNSC TCGA-CQ-A4CE 6 2 CDS-5'UTR Inter-chr p11.2 q21.2 29219 ChimerSeq STARFusion TCGA_RNA-Seq GNA12-PHC3 GNA12 chr7 2883487 - PHC3 chr3 169896726 - Exonic hg19 HNSC TCGA-CQ-A4CA 2 23 Out-of-frame Inter-chr p22.2 q26.2 Tumor suppressor gene Seq+ 29220 ChimerSeq STARFusion TCGA_RNA-Seq PI3-KRT6A PI3 chr20 43805106 + KRT6A chr12 52886995 - Exonic hg19 HNSC TCGA-BA-5151 3 51 Out-of-frame Inter-chr q13.12 q13.13 29221 ChimerSeq STARFusion TCGA_RNA-Seq ACOT1-IGKC ACOT1 chr14 74004598 + IGKC chr2 89161071 - Exonic hg19 HNSC TCGA-BA-5153 176 0 Out-of-frame Inter-chr q24.3 p11.2 29222 ChimerSeq STARFusion TCGA_RNA-Seq ACOT1-IGKJ2 ACOT1 chr14 74004598 + IGKJ2 chr2 89161071 - Exonic hg19 HNSC TCGA-BA-5153 176 0 Out-of-frame Inter-chr q24.3 p11.2 29223 ChimerSeq STARFusion TCGA_RNA-Seq TRIO-PPP2R5E TRIO chr5 14280545 + PPP2R5E chr14 63848875 - Exonic hg19 HNSC TCGA-BA-5153 12 78 In-Frame Inter-chr p15.2 q23.2 Seq+ 29224 ChimerSeq STARFusion TCGA_RNA-Seq USP10-CRISPLD2 USP10 chr16 84733717 + CRISPLD2 chr16 84906048 + Exonic hg19 HNSC TCGA-BA-5152 4 52 Out-of-frame Intra-chr q24.1 q24.1 29225 ChimerSeq STARFusion TCGA_RNA-Seq CCDC144NL-NCOR1P1 CCDC144NL chr17 20770484 - NCOR1P1 chr20 26094692 - Exonic hg19 HNSC TCGA-BA-5152 7 23 Out-of-frame Inter-chr p11.2 p11.1 29226 ChimerSeq STARFusion TCGA_RNA-Seq EHBP1-MDH1 EHBP1 chr2 63101667 + MDH1 chr2 63821622 + Exonic hg19 HNSC TCGA-CQ-A4CH 36 138 In-Frame Intra-chr p15 p15 Seq+ 29227 ChimerSeq STARFusion TCGA_RNA-Seq CHST10-MAP4K4 CHST10 chr2 101019026 - MAP4K4 chr2 102440390 + Exonic hg19 HNSC TCGA-CQ-A4CH 27 82 In-Frame Intra-chr q11.2 Tumor suppressor gene q11.2 Seq+ 29228 ChimerSeq STARFusion TCGA_RNA-Seq PAPLN-MYL4 PAPLN chr14 73741167 + MYL4 chr17 45286755 + Exonic hg19 HNSC TCGA-CQ-A4CH 4 13 3'UTR-5'UTR Inter-chr q24.2 q21.32 Seq+ 29229 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC10-MDS2 TRAPPC10 chr21 45432441 + MDS2 chr1 23966170 + Exonic hg19 HNSC TCGA-CQ-A4CH 2 5 CDS-5'UTR Inter-chr q22.3 p36.12 Seq+ 29230 ChimerSeq STARFusion TCGA_RNA-Seq SUFU-ADK SUFU chr10 104309863 + ADK chr10 76468079 + Exonic hg19 HNSC TCGA-4P-AA8J 19 38 In-Frame Intra-chr q24.32 Oncogene Tumor suppressor gene q22.2 Seq+ 29231 ChimerSeq STARFusion TCGA_RNA-Seq SMPD4P1-MED15 SMPD4P1 chr22 20980383 - MED15 chr22 20936898 + Exonic hg19 HNSC TCGA-4P-AA8J 12 54 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 29232 ChimerSeq STARFusion TCGA_RNA-Seq SMPD4P1-MED15 SMPD4P1 chr22 20977349 - MED15 chr22 20936898 + Exonic hg19 HNSC TCGA-4P-AA8J 3 53 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 29233 ChimerSeq STARFusion TCGA_RNA-Seq MMS19-MICU1 MMS19 chr10 99258030 - MICU1 chr10 74326552 - Exonic hg19 HNSC TCGA-4P-AA8J 3 8 CDS-5'UTR Intra-chr q24.1 q22.1 Seq+ 29234 ChimerSeq STARFusion TCGA_RNA-Seq FLG-S100A10 FLG chr1 152297665 - S100A10 chr1 151982705 - Exonic hg19 HNSC TCGA-4P-AA8J 3 3 5'UTR-5'UTR Intra-chr q21.3 q21.3 29235 ChimerSeq STARFusion TCGA_RNA-Seq TOP1-CA10 TOP1 chr20 39658095 + CA10 chr17 49825178 - Exonic hg19 HNSC TCGA-MZ-A7D7 12 11 Out-of-frame Inter-chr q12 Oncogene q22 Seq+ 29236 ChimerSeq STARFusion TCGA_RNA-Seq YWHAQ-ITGB1BP1 YWHAQ chr2 9771070 - ITGB1BP1 chr2 9548334 - Exonic hg19 HNSC TCGA-MZ-A7D7 8 7 5'UTR-CDS Intra-chr p25.1 p25.1 Seq+ 29237 ChimerSeq STARFusion TCGA_RNA-Seq JARID2-HFE JARID2 chr6 15452406 + HFE chr6 26091069 + Exonic hg19 HNSC TCGA-MZ-A7D7 2 11 In-Frame Intra-chr p22.3 p22.2 Seq+ 29238 ChimerSeq STARFusion TCGA_RNA-Seq PSMD1-ATP2C1 PSMD1 chr2 232011070 + ATP2C1 chr3 130659474 + Exonic hg19 HNSC TCGA-CV-7177 2 33 In-Frame Inter-chr q37.1 q22.1 Seq+ 29239 ChimerSeq STARFusion TCGA_RNA-Seq BAP1-KRT6A BAP1 chr3 52436020 - KRT6A chr12 52882296 - Exonic hg19 HNSC TCGA-CV-7177 4 1 Out-of-frame Inter-chr p21.1 Oncogene Tumor suppressor gene q13.13 29240 ChimerSeq STARFusion TCGA_RNA-Seq SEPW1-EHD2 SEPW1 chr19 48282071 + EHD2 chr19 48244138 + Exonic hg19 HNSC TCGA-BA-6872 21 92 Out-of-frame Intra-chr q13.33 Seq+ 29241 ChimerSeq STARFusion TCGA_RNA-Seq LGALS3BP-KRT14 LGALS3BP chr17 76969181 - KRT14 chr17 39739392 - Exonic hg19 HNSC TCGA-BA-6872 3 11 In-Frame Intra-chr q25.3 q21.2 29242 ChimerSeq STARFusion TCGA_RNA-Seq LYPD1-NCKAP5 LYPD1 chr2 133425973 - NCKAP5 chr2 133489624 - Exonic hg19 HNSC TCGA-BA-6872 3 11 In-Frame Intra-chr q21.2 q21.2 Seq+ 29243 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP39-CYHR1 ARHGAP39 chr8 145911071 - CYHR1 chr8 145678843 - Exonic hg19 HNSC TCGA-BA-6872 2 6 5'UTR-CDS Intra-chr q24.3 q24.3 29244 ChimerSeq STARFusion TCGA_RNA-Seq CCAT1-CASC8 CCAT1 chr8 128231055 - CASC8 chr8 128433208 - Exonic hg19 HNSC TCGA-BA-6871 60 383 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 29245 ChimerSeq STARFusion TCGA_RNA-Seq CCAT1-CASC8 CCAT1 chr8 128231055 - CASC8 chr8 128302305 - Exonic hg19 HNSC TCGA-BA-6871 8 379 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 29246 ChimerSeq STARFusion TCGA_RNA-Seq NUAK2-LEMD1 NUAK2 chr1 205280833 - LEMD1 chr1 205389702 - Exonic hg19 HNSC TCGA-BA-6871 39 152 CDS-5'UTR Intra-chr q32.1 q32.1 Seq+ 29247 ChimerSeq STARFusion TCGA_RNA-Seq BAIAP2-TBCD BAIAP2 chr17 79060380 + TBCD chr17 80847544 + Exonic hg19 HNSC TCGA-BA-6871 38 150 In-Frame Intra-chr q25.3 Seq+ 29248 ChimerSeq STARFusion TCGA_RNA-Seq SCNN1A-DCP1B SCNN1A chr12 6457893 - DCP1B chr12 2055452 - Exonic hg19 HNSC TCGA-BA-6871 8 78 In-Frame Intra-chr p13.31 p13.33 Seq+ 29249 ChimerSeq STARFusion TCGA_RNA-Seq SCNN1A-DCP1B SCNN1A chr12 6457237 - DCP1B chr12 2055452 - Exonic hg19 HNSC TCGA-BA-6871 5 78 Out-of-frame Intra-chr p13.31 p13.33 Seq+ 29250 ChimerSeq STARFusion TCGA_RNA-Seq NR4A1-IL20RB NR4A1 chr12 52435713 + IL20RB chr3 136699308 + Exonic hg19 HNSC TCGA-BA-6871 10 17 In-Frame Inter-chr q13.13 Tumor suppressor gene Transcription factor q22.3 Seq+ 29251 ChimerSeq STARFusion TCGA_RNA-Seq HSPG2-IGH@ HSPG2 chr1 22201510 - IGH@ chr14 106330461 - Exonic hg19 HNSC TCGA-BA-6870 39 1 Out-of-frame Inter-chr p36.12 32.33 29252 ChimerSeq STARFusion TCGA_RNA-Seq PTPRA-IGH@ PTPRA chr20 3008426 + IGH@ chr14 106330838 - Exonic hg19 HNSC TCGA-BA-6870 27 3 Out-of-frame Inter-chr p13 32.33 29253 ChimerSeq STARFusion TCGA_RNA-Seq PTPRA-IGHG3 PTPRA chr20 3008426 + IGHG3 chr14 106330838 - Exonic hg19 HNSC TCGA-BA-6870 27 3 Out-of-frame Inter-chr p13 29254 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-DYRK1A IGH@ chr14 107034730 - DYRK1A chr21 38738423 + Exonic hg19 HNSC TCGA-BA-6870 12 2 Out-of-frame Inter-chr 32.33 q22.13 CMGC:DYRK 29255 ChimerSeq STARFusion TCGA_RNA-Seq LINC00476-RNF216 LINC00476 chr9 98637262 - RNF216 chr7 5754821 - Exonic hg19 HNSC TCGA-BA-6870 3 16 3'UTR-CDS Inter-chr q22.32 p22.1 29256 ChimerSeq STARFusion TCGA_RNA-Seq LINC00476-RNF216 LINC00476 chr9 98638147 - RNF216 chr7 5754821 - Exonic hg19 HNSC TCGA-BA-6870 2 16 3'UTR-CDS Inter-chr q22.32 p22.1 29257 ChimerSeq STARFusion TCGA_RNA-Seq DEDD-UFC1 DEDD chr1 161100605 - UFC1 chr1 161123716 + Exonic hg19 HNSC TCGA-BA-A6D8 13 39 5'UTR-5'UTR Intra-chr q23.3 q23.3 Seq+ 29258 ChimerSeq STARFusion TCGA_RNA-Seq PCNX-TTLL5 PCNX chr14 71570386 + TTLL5 chr14 76420767 + Exonic hg19 HNSC TCGA-BA-A6D8 6 17 Out-of-frame Intra-chr q24.3 Seq+ 29259 ChimerSeq STARFusion TCGA_RNA-Seq KRT17-CANT1 KRT17 chr17 39776788 - CANT1 chr17 76996299 - Exonic hg19 HNSC TCGA-BA-A6D8 5 1 CDS-5'UTR Intra-chr q21.2 q25.3 29260 ChimerSeq STARFusion TCGA_RNA-Seq C18orf8-PSPC1 C18orf8 chr18 21089243 + PSPC1 chr13 20346683 - Exonic hg19 HNSC TCGA-BA-A6DE 16 121 In-Frame Inter-chr q11.2 q12.11 Seq+ 29261 ChimerSeq STARFusion TCGA_RNA-Seq MAP2-ICA1L MAP2 chr2 210289000 + ICA1L chr2 203680732 - Exonic hg19 HNSC TCGA-BA-A6DE 9 45 5'UTR-CDS Intra-chr q34 q33.2 Seq+ 29262 ChimerSeq STARFusion TCGA_RNA-Seq FTCDNL1-C2orf69 FTCDNL1 chr2 200710798 - C2orf69 chr2 200789785 + Exonic hg19 HNSC TCGA-BA-A6DE 2 11 Out-of-frame Intra-chr q33.1 q33.1 29263 ChimerSeq STARFusion TCGA_RNA-Seq LDLRAD2-IGH@ LDLRAD2 chr1 22150188 + IGH@ chr14 106175004 - Exonic hg19 HNSC TCGA-BA-A6DD 18 2 Out-of-frame Inter-chr p36.12 32.33 29264 ChimerSeq STARFusion TCGA_RNA-Seq LDLRAD2-IGHA1 LDLRAD2 chr1 22150188 + IGHA1 chr14 106175004 - Exonic hg19 HNSC TCGA-BA-A6DD 18 1 Out-of-frame Inter-chr p36.12 29265 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525072 - IGHG1 chr14 106237745 - Exonic hg19 HNSC TCGA-BA-A6DD 15 1 Out-of-frame Inter-chr q34 Oncogene q32.33 29266 ChimerSeq STARFusion TCGA_RNA-Seq LDLRAD2-IGH@ LDLRAD2 chr1 22150188 + IGH@ chr14 106054734 - Exonic hg19 HNSC TCGA-BA-A6DD 8 2 Out-of-frame Inter-chr p36.12 32.33 29267 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-STARD5 IGL@ chr22 23199021 + STARD5 chr15 81603172 - Exonic hg19 HNSC TCGA-BA-A6DD 8 0 Out-of-frame Inter-chr q11.22 q25.1 29268 ChimerSeq STARFusion TCGA_RNA-Seq ANO1-MLLT10P1 ANO1 chr11 69978185 + MLLT10P1 chr20 29638051 - Exonic hg19 HNSC TCGA-BA-A6DD 3 5 CDS-3'UTR Inter-chr q13.3 q11.21 29269 ChimerSeq STARFusion TCGA_RNA-Seq MRPL21-SHANK2 MRPL21 chr11 68660358 - SHANK2 chr11 70319544 - Exonic hg19 HNSC TCGA-F7-7848 43 168 Out-of-frame Intra-chr q13.3 q13.4 Seq+ 29270 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB2-PCNXL3 RPS6KB2 chr11 67196711 + PCNXL3 chr11 65385411 + Exonic hg19 HNSC TCGA-F7-7848 11 98 Out-of-frame Intra-chr q13.2 Seq+ 29271 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGH@ HOMER2 chr15 83561493 - IGH@ chr14 106175004 - Exonic hg19 HNSC TCGA-F7-7848 11 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene 32.33 29272 ChimerSeq STARFusion TCGA_RNA-Seq C11orf80-TSGA10IP C11orf80 chr11 66526567 + TSGA10IP chr11 65713186 + Exonic hg19 HNSC TCGA-F7-7848 4 21 In-Frame Intra-chr q13.2 q13.1 Seq+ 29273 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-XDH IGH@ chr14 106641561 - XDH chr2 31600104 - Exonic hg19 HNSC TCGA-F7-7848 7 1 Out-of-frame Inter-chr 32.33 p23.1 29274 ChimerSeq STARFusion TCGA_RNA-Seq KRT16-KIF13B KRT16 chr17 39767891 - KIF13B chr8 29005037 - Exonic hg19 HNSC TCGA-BA-A6DB 4 0 Out-of-frame Inter-chr q21.2 p12 29275 ChimerSeq STARFusion TCGA_RNA-Seq PARL-ABCC5 PARL chr3 183602510 - ABCC5 chr3 183732235 - Exonic hg19 HNSC TCGA-BA-A6DL 6 13 CDS-5'UTR Intra-chr q27.1 q27.1 Seq+ 29276 ChimerSeq STARFusion TCGA_RNA-Seq PRPSAP2-PLLP PRPSAP2 chr17 18770647 + PLLP chr16 57292496 - Exonic hg19 HNSC TCGA-BA-A8YP 16 33 Out-of-frame Inter-chr p11.2 q13 Seq+ 29277 ChimerSeq STARFusion TCGA_RNA-Seq NRIP1-GDPD1 NRIP1 chr21 16437066 - GDPD1 chr17 57322775 + Exonic hg19 HNSC TCGA-BA-A8YP 11 29 5'UTR-CDS Inter-chr q21.1 q22 Seq+ 29278 ChimerSeq STARFusion TCGA_RNA-Seq ZFR-PLEKHG4B ZFR chr5 32379221 - PLEKHG4B chr5 181629 + Exonic hg19 HNSC TCGA-BA-A8YP 6 17 Out-of-frame Intra-chr p13.3 p15.33 Seq+ 29279 ChimerSeq STARFusion TCGA_RNA-Seq HAT1-METAP1D HAT1 chr2 172809519 + METAP1D chr2 172926226 + Exonic hg19 HNSC TCGA-BA-A8YP 2 26 Out-of-frame Intra-chr q31.1 q31.1 29280 ChimerSeq STARFusion TCGA_RNA-Seq KBTBD2-PDE1C KBTBD2 chr7 32931148 - PDE1C chr7 32209568 - Exonic hg19 HNSC TCGA-BA-A8YP 5 8 5'UTR-CDS Intra-chr p14.3 p14.3 Seq+ 29281 ChimerSeq STARFusion TCGA_RNA-Seq KDM6A-DLL1 KDM6A chrX 44833960 + DLL1 chr6 170595386 - Exonic hg19 HNSC TCGA-BA-A8YP 4 10 Out-of-frame Inter-chr p11.3 Oncogene Tumor suppressor gene Seq+ 29282 ChimerSeq STARFusion TCGA_RNA-Seq DANCR-GTF3C3 DANCR chr4 53579126 + GTF3C3 chr2 197634763 - Exonic hg19 HNSC TCGA-BA-A8YP 5 5 5'UTR-CDS Inter-chr q12 q33.1 Seq+ 29283 ChimerSeq STARFusion TCGA_RNA-Seq LINC00393-KLF12 LINC00393 chr13 74098917 - KLF12 chr13 74269808 - Exonic hg19 HNSC TCGA-BA-A8YP 3 12 Out-of-frame Intra-chr q22.1 q22.1 Transcription factor 29284 ChimerSeq STARFusion TCGA_RNA-Seq RPL9-UGDH RPL9 chr4 39459206 - UGDH chr4 39515804 - Exonic hg19 HNSC TCGA-BA-A8YP 2 10 In-Frame Intra-chr p14 p14 29285 ChimerSeq STARFusion TCGA_RNA-Seq RSF1-TENM4 RSF1 chr11 77531574 - TENM4 chr11 78449615 - Exonic hg19 HNSC TCGA-BA-A8YP 3 5 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 29286 ChimerSeq STARFusion TCGA_RNA-Seq UBE4B-PEX14 UBE4B chr1 10093752 + PEX14 chr1 10596270 + Exonic hg19 HNSC TCGA-BA-A6DJ 12 43 In-Frame Intra-chr p36.22 Tumor suppressor gene p36.22 Seq+ 29287 ChimerSeq STARFusion TCGA_RNA-Seq VMP1-TUBD1 VMP1 chr17 57895134 + TUBD1 chr17 57955695 - Exonic hg19 HNSC TCGA-BA-A6DJ 6 21 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 29288 ChimerSeq STARFusion TCGA_RNA-Seq PARD3-ARMC4 PARD3 chr10 35103804 - ARMC4 chr10 28196706 - Exonic hg19 HNSC TCGA-CR-7377 4 25 Out-of-frame Intra-chr p11.21 p12.1 Seq+ 29289 ChimerSeq STARFusion TCGA_RNA-Seq FAT1-MTNR1A FAT1 chr4 187627717 - MTNR1A chr4 187455711 - Exonic hg19 HNSC TCGA-CR-7376 50 130 In-Frame Intra-chr q35.2 Tumor suppressor gene q35.2 29290 ChimerSeq STARFusion TCGA_RNA-Seq APTX-NOL6 APTX chr9 33001565 - NOL6 chr9 33472410 - Exonic hg19 HNSC TCGA-CR-7376 6 9 Out-of-frame Intra-chr p21.1 p13.3 Seq+ 29291 ChimerSeq STARFusion TCGA_RNA-Seq CNTFR-KIF24 CNTFR chr9 34581093 - KIF24 chr9 34297112 - Exonic hg19 HNSC TCGA-CR-7376 2 19 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 29292 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106111129 - Exonic hg19 HNSC TCGA-CR-7374 109 1 Out-of-frame Inter-chr q37.3 29293 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106136184 - Exonic hg19 HNSC TCGA-CR-7374 65 1 Out-of-frame Inter-chr q37.3 29294 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525072 - IGHG1 chr14 106209410 - Exonic hg19 HNSC TCGA-CR-7374 27 1 Out-of-frame Inter-chr q34 Oncogene q32.33 29295 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525072 - IGHG1 chr14 106237745 - Exonic hg19 HNSC TCGA-CR-7374 23 1 Out-of-frame Inter-chr q34 Oncogene q32.33 29296 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-ATG10 CREBBP chr16 3900298 - ATG10 chr5 81354314 + Exonic hg19 HNSC TCGA-CR-7374 6 30 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene q14.1 Seq+ 29297 ChimerSeq STARFusion TCGA_RNA-Seq ACAT2-IGHG2 ACAT2 chr6 160183155 + IGHG2 chr14 106111130 - Exonic hg19 HNSC TCGA-CR-7374 9 1 Out-of-frame Inter-chr q25.3 29298 ChimerSeq STARFusion TCGA_RNA-Seq SART1-IGKC SART1 chr11 65734006 + IGKC chr2 89160770 - Exonic hg19 HNSC TCGA-CR-7374 7 1 Out-of-frame Inter-chr q13.1 p11.2 29299 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-SPSB1 IGKC chr2 89156768 - SPSB1 chr1 9416165 + Exonic hg19 HNSC TCGA-CR-7374 6 1 Out-of-frame Inter-chr p11.2 p36.22 Seq+ 29300 ChimerSeq STARFusion TCGA_RNA-Seq CSDE1-CYB5B CSDE1 chr1 115280620 - CYB5B chr16 69464057 + Exonic hg19 HNSC TCGA-CR-7374 4 5 Out-of-frame Inter-chr p13.2 q22.1 Seq+ 29301 ChimerSeq STARFusion TCGA_RNA-Seq TYW1-SIRPB2 TYW1 chr7 66660324 + SIRPB2 chr20 1460710 - Exonic hg19 HNSC TCGA-CR-7374 2 6 Out-of-frame Inter-chr q11.21 p13 Seq+ 29302 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242532 + KRT14 chr17 39768618 - Exonic hg19 HNSC TCGA-CR-7373 6 6 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29303 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242523 + KRT14 chr17 39742779 - Exonic hg19 HNSC TCGA-CR-7373 4 5 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29304 ChimerSeq STARFusion TCGA_RNA-Seq SH2D3A-GPM6A SH2D3A chr19 6767398 - GPM6A chr4 176573138 - Exonic hg19 HNSC TCGA-CQ-A4CI 7 38 5'UTR-CDS Inter-chr p13.3 q34.2 Seq+ 29305 ChimerSeq STARFusion TCGA_RNA-Seq PLCXD2-CD96 PLCXD2 chr3 111451550 + CD96 chr3 111384374 + Exonic hg19 HNSC TCGA-CQ-A4CI 6 16 3'UTR-3'UTR Intra-chr q13.2 q13.13 Seq+ 29306 ChimerSeq STARFusion TCGA_RNA-Seq PHLDB2-CD96 PHLDB2 chr3 111451550 + CD96 chr3 111384374 + Exonic hg19 HNSC TCGA-CQ-A4CI 6 15 5'UTR-3'UTR Intra-chr q13.2 q13.13 Seq+ 29307 ChimerSeq STARFusion TCGA_RNA-Seq ROCK1-RPL29 ROCK1 chr18 18690779 - RPL29 chr3 52029896 - Exonic hg19 HNSC TCGA-CR-7371 12 37 CDS-5'UTR Inter-chr q11.1 AGC:DMPK p21.2 Seq+ 29308 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-PLEC IGH@ chr14 106725199 - PLEC chr8 145032799 - Exonic hg19 HNSC TCGA-CR-7371 3 9 Out-of-frame Inter-chr 32.33 q24.3 29309 ChimerSeq STARFusion TCGA_RNA-Seq PLA2R1-ITGB6 PLA2R1 chr2 160832579 - ITGB6 chr2 160998582 - Exonic hg19 HNSC TCGA-CR-7370 37 129 In-Frame Intra-chr q24.2 Tumor suppressor gene q24.2 Seq+ 29310 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-AHDC1 WASF2 chr1 27816497 - AHDC1 chr1 27879696 - Exonic hg19 HNSC TCGA-CR-7370 15 135 5'UTR-5'UTR Intra-chr p36.11 p35.3 Transcription factor Seq+ 29311 ChimerSeq STARFusion TCGA_RNA-Seq SLBP-LETM1 SLBP chr4 1696501 - LETM1 chr4 1827410 - Exonic hg19 HNSC TCGA-CR-7370 17 118 In-Frame Intra-chr p16.3 p16.3 Seq+ 29312 ChimerSeq STARFusion TCGA_RNA-Seq AGPS-HNRNPA3 AGPS chr2 178307214 + HNRNPA3 chr2 178080267 + Exonic hg19 HNSC TCGA-CR-7370 24 61 In-Frame Intra-chr q31.2 q31.2 29313 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-AHDC1 WASF2 chr1 27816497 - AHDC1 chr1 27879815 - Exonic hg19 HNSC TCGA-CR-7370 3 132 5'UTR-5'UTR Intra-chr p36.11 p35.3 Transcription factor Seq+ 29314 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-AHDC1 WASF2 chr1 27816497 - AHDC1 chr1 27879801 - Exonic hg19 HNSC TCGA-CR-7370 3 132 5'UTR-5'UTR Intra-chr p36.11 p35.3 Transcription factor Seq+ 29315 ChimerSeq STARFusion TCGA_RNA-Seq KPNA6-EIF3I KPNA6 chr1 32573735 + EIF3I chr1 32694100 + Exonic hg19 HNSC TCGA-CR-7379 75 99 Out-of-frame Intra-chr p35.2 p35.2 Seq+ 29316 ChimerSeq STARFusion TCGA_RNA-Seq NRBP1-IGHG1 NRBP1 chr2 27664675 + IGHG1 chr14 106209409 - Exonic hg19 HNSC TCGA-CR-7379 12 1 Out-of-frame Inter-chr p23.3 Other:NRBP Tumor suppressor gene q32.33 29317 ChimerSeq STARFusion TCGA_RNA-Seq NRBP1-IGHG1 NRBP1 chr2 27664675 + IGHG1 chr14 106237744 - Exonic hg19 HNSC TCGA-CR-7379 8 1 Out-of-frame Inter-chr p23.3 Other:NRBP Tumor suppressor gene q32.33 29318 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-ATP4B GAS6 chr13 114549500 - ATP4B chr13 114309257 - Exonic hg19 HNSC TCGA-CR-7379 4 10 In-Frame Intra-chr q34 Oncogene q34 Seq+ 29319 ChimerSeq STARFusion TCGA_RNA-Seq FUBP1-USP33 FUBP1 chr1 78444569 - USP33 chr1 78207433 - Exonic hg19 HNSC TCGA-CR-7379 4 4 In-Frame Intra-chr p31.1 Oncogene p31.1 Tumor suppressor gene Seq+ 29320 ChimerSeq STARFusion TCGA_RNA-Seq PHLDB2-CD96 PHLDB2 chr3 111564782 + CD96 chr3 111366390 + Exonic hg19 HNSC TCGA-BA-5555 17 15 In-Frame Intra-chr q13.2 q13.13 Seq+ 29321 ChimerSeq STARFusion TCGA_RNA-Seq PLCXD2-CD96 PLCXD2 chr3 111564782 + CD96 chr3 111366390 + Exonic hg19 HNSC TCGA-BA-5555 17 15 3'UTR-CDS Intra-chr q13.2 q13.13 Seq+ 29322 ChimerSeq STARFusion TCGA_RNA-Seq EBPL-LPAR6 EBPL chr13 50265390 - LPAR6 chr13 48996926 - Exonic hg19 HNSC TCGA-BA-5555 4 24 CDS-5'UTR Intra-chr q14.2 q14.2 Seq+ 29323 ChimerSeq STARFusion TCGA_RNA-Seq EBPL-LPAR6 EBPL chr13 50265390 - LPAR6 chr13 48989946 - Exonic hg19 HNSC TCGA-BA-5555 4 19 CDS-5'UTR Intra-chr q14.2 q14.2 Seq+ 29324 ChimerSeq STARFusion TCGA_RNA-Seq EBPL-LPAR6 EBPL chr13 50265390 - LPAR6 chr13 48963948 - Exonic hg19 HNSC TCGA-BA-5555 3 19 CDS-3'UTR Intra-chr q14.2 q14.2 Seq+ 29325 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242522 + KRT14 chr17 39742780 - Exonic hg19 HNSC TCGA-BA-5555 3 6 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29326 ChimerSeq STARFusion TCGA_RNA-Seq PLXDC2-KRT6A PLXDC2 chr10 20105754 + KRT6A chr12 52884441 - Exonic hg19 HNSC TCGA-BA-5557 5 8 Out-of-frame Inter-chr p12.31 q13.13 29327 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242532 + KRT14 chr17 39768618 - Exonic hg19 HNSC TCGA-BA-5557 3 15 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29328 ChimerSeq STARFusion TCGA_RNA-Seq IL1RN-COL3A1 IL1RN chr2 113885287 + COL3A1 chr2 189859021 + Exonic hg19 HNSC TCGA-BA-5557 3 10 Out-of-frame Intra-chr q14.1 q32.2 29329 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CTC1 IGH@ chr14 107062128 - CTC1 chr17 8130329 - Exonic hg19 HNSC TCGA-BA-5559 96 1 Out-of-frame Inter-chr 32.33 p13.1 29330 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CTC1 IGH@ chr14 106780513 - CTC1 chr17 8130329 - Exonic hg19 HNSC TCGA-BA-5559 66 1 Out-of-frame Inter-chr 32.33 p13.1 29331 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CTC1 IGH@ chr14 107078378 - CTC1 chr17 8130334 - Exonic hg19 HNSC TCGA-BA-5559 44 1 Out-of-frame Inter-chr 32.33 p13.1 29332 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CTC1 IGH@ chr14 107078372 - CTC1 chr17 8130328 - Exonic hg19 HNSC TCGA-BA-5559 40 1 Out-of-frame Inter-chr 32.33 p13.1 29333 ChimerSeq STARFusion TCGA_RNA-Seq SAMHD1-YIF1B SAMHD1 chr20 35547767 - YIF1B chr19 38796147 - Exonic hg19 HNSC TCGA-BA-5559 14 57 In-Frame Inter-chr q11.23 q13.2 Seq+ 29334 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG3 STK25 chr2 242434915 - IGHG3 chr14 106237745 - Exonic hg19 HNSC TCGA-BA-5559 28 1 Out-of-frame Inter-chr q37.3 29335 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-HIVEP3 IGHG1 chr14 106134768 - HIVEP3 chr1 41978893 - Exonic hg19 HNSC TCGA-BA-5559 9 1 Out-of-frame Inter-chr q32.33 p34.2 Tumor suppressor gene Transcription factor 29336 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-NOTCH1 IGHG1 chr14 106134591 - NOTCH1 chr9 139403429 - Exonic hg19 HNSC TCGA-BA-5559 4 7 Out-of-frame Inter-chr q32.33 q34.3 Oncogene Tumor suppressor gene 29337 ChimerSeq STARFusion TCGA_RNA-Seq GRAMD2-PKM GRAMD2 chr15 72490072 - PKM chr15 72494961 - Exonic hg19 HNSC TCGA-BA-5558 10 31 Out-of-frame Intra-chr q23 q23 Seq+ 29338 ChimerSeq STARFusion TCGA_RNA-Seq GRAMD2-PKM GRAMD2 chr15 72490072 - PKM chr15 72492996 - Exonic hg19 HNSC TCGA-BA-5558 3 30 Out-of-frame Intra-chr q23 q23 Seq+ 29339 ChimerSeq STARFusion TCGA_RNA-Seq KRT6A-PLCD3 KRT6A chr12 52840879 - PLCD3 chr17 43189939 - Exonic hg19 HNSC TCGA-BA-5558 10 1 Out-of-frame Inter-chr q13.13 q21.31 29340 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242532 + KRT14 chr17 39768618 - Exonic hg19 HNSC TCGA-BA-5558 3 12 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29341 ChimerSeq STARFusion TCGA_RNA-Seq LAMP1-CUL4A LAMP1 chr13 113965182 + CUL4A chr13 113917801 + Exonic hg19 HNSC TCGA-CQ-A4C7 6 106 Out-of-frame Intra-chr q34 Oncogene q34 Seq+ 29342 ChimerSeq STARFusion TCGA_RNA-Seq C16orf74-EMC8 C16orf74 chr16 85784532 - EMC8 chr16 85814079 - Exonic hg19 HNSC TCGA-CQ-A4C7 3 14 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 29343 ChimerSeq STARFusion TCGA_RNA-Seq KRT14-GRID1 KRT14 chr17 39740012 - GRID1 chr10 87898662 - Exonic hg19 HNSC TCGA-CQ-A4C6 18 0 Out-of-frame Inter-chr q21.2 q23.2 29344 ChimerSeq STARFusion TCGA_RNA-Seq CHSY1-PPP1CA CHSY1 chr15 101775460 - PPP1CA chr11 67168670 - Exonic hg19 HNSC TCGA-CQ-A4C6 4 49 Out-of-frame Inter-chr q26.3 q13.2 Tumor suppressor gene Seq+ 29345 ChimerSeq STARFusion TCGA_RNA-Seq CHSY1-PPP1CA CHSY1 chr15 101775287 - PPP1CA chr11 67168670 - Exonic hg19 HNSC TCGA-CQ-A4C6 2 48 Out-of-frame Inter-chr q26.3 q13.2 Tumor suppressor gene Seq+ 29346 ChimerSeq STARFusion TCGA_RNA-Seq KRT14-PML KRT14 chr17 39740012 - PML chr15 74315389 + Exonic hg19 HNSC TCGA-CQ-A4C6 10 4 Out-of-frame Inter-chr q21.2 q24.1 Oncogene Tumor suppressor gene 29347 ChimerSeq STARFusion TCGA_RNA-Seq KRT17-CANT1 KRT17 chr17 39776788 - CANT1 chr17 76996299 - Exonic hg19 HNSC TCGA-CQ-A4C6 7 1 CDS-5'UTR Intra-chr q21.2 q25.3 29348 ChimerSeq STARFusion TCGA_RNA-Seq KRT6C-HSPB1 KRT6C chr12 52864916 - HSPB1 chr7 75933124 + Exonic hg19 HNSC TCGA-CQ-A4C6 3 6 Out-of-frame Inter-chr q13.13 q11.23 29349 ChimerSeq STARFusion TCGA_RNA-Seq SFN-YWHAG SFN chr1 27190112 + YWHAG chr7 75959255 - Exonic hg19 HNSC TCGA-QK-A6IH 6 1 Out-of-frame Inter-chr p36.11 Tumor suppressor gene q11.23 29350 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57752204 + VMP1 chr17 57915656 + Exonic hg19 HNSC TCGA-QK-A6IG 15 112 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 29351 ChimerSeq STARFusion TCGA_RNA-Seq STK39-PARVA STK39 chr2 169103738 - PARVA chr11 12495292 + Exonic hg19 HNSC TCGA-QK-A6IG 2 5 In-Frame Inter-chr q24.3 p15.3 Seq+ 29352 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-KRT16 KANSL1 chr17 44301037 - KRT16 chr17 39768976 - Exonic hg19 HNSC TCGA-BB-A5HU 19 160 5'UTR-5'UTR Intra-chr q21.2 29353 ChimerSeq STARFusion TCGA_RNA-Seq CRHR1-KRT16 CRHR1 chr17 43699407 + KRT16 chr17 39768976 - Exonic hg19 HNSC TCGA-BB-A5HU 14 95 5'UTR-5'UTR Intra-chr q21.31 q21.2 29354 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-KRT16 KANSL1 chr17 44270189 - KRT16 chr17 39768976 - Exonic hg19 HNSC TCGA-BB-A5HU 11 81 5'UTR-5'UTR Intra-chr q21.2 29355 ChimerSeq STARFusion TCGA_RNA-Seq CRHR1-KRT16 CRHR1 chr17 43699407 + KRT16 chr17 39768538 - Exonic hg19 HNSC TCGA-BB-A5HU 4 95 5'UTR-CDS Intra-chr q21.31 q21.2 29356 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-KRT16 KANSL1 chr17 44270189 - KRT16 chr17 39769195 - Exonic hg19 HNSC TCGA-BB-A5HU 6 81 5'UTR-5'UTR Intra-chr q21.2 29357 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-KRT16 KANSL1 chr17 44270189 - KRT16 chr17 39768538 - Exonic hg19 HNSC TCGA-BB-A5HU 5 81 5'UTR-CDS Intra-chr q21.2 29358 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-KRT16 KANSL1 chr17 44301037 - KRT16 chr17 39768538 - Exonic hg19 HNSC TCGA-BB-A5HU 4 81 5'UTR-CDS Intra-chr q21.2 29359 ChimerSeq STARFusion TCGA_RNA-Seq PAIP1-C5orf28 PAIP1 chr5 43555932 - C5orf28 chr5 43446659 - Exonic hg19 HNSC TCGA-CQ-A4C9 2 31 In-Frame Intra-chr p12 29360 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-DYRK1A IGH@ chr14 107078370 - DYRK1A chr21 38739467 + Exonic hg19 HNSC TCGA-MT-A67F 32 0 Out-of-frame Inter-chr 32.33 q22.13 CMGC:DYRK 29361 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-DYRK1A IGH@ chr14 106733145 - DYRK1A chr21 38739463 + Exonic hg19 HNSC TCGA-MT-A67F 27 0 Out-of-frame Inter-chr 32.33 q22.13 CMGC:DYRK 29362 ChimerSeq STARFusion TCGA_RNA-Seq RBM17-PRKACB RBM17 chr10 6148201 + PRKACB chr1 84644860 + Exonic hg19 HNSC TCGA-MT-A67F 10 49 In-Frame Inter-chr p15.1 p31.1 Seq+ 29363 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-COL16A1 CPSF6 chr12 69656342 + COL16A1 chr1 32118454 - Exonic hg19 HNSC TCGA-KU-A6H7 70 294 3'UTR-CDS Inter-chr q15 p35.2 Seq+ 29364 ChimerSeq STARFusion TCGA_RNA-Seq COL16A1-CPSF6 COL16A1 chr1 32119200 - CPSF6 chr12 69663292 + Exonic hg19 HNSC TCGA-KU-A6H7 20 120 CDS-3'UTR Inter-chr p35.2 q15 Seq+ 29365 ChimerSeq STARFusion TCGA_RNA-Seq HSPA8-VSTM5 HSPA8 chr11 122931301 - VSTM5 chr11 93554489 - Exonic hg19 HNSC TCGA-KU-A6H7 6 40 Out-of-frame Intra-chr q24.1 q21 Seq+ 29366 ChimerSeq STARFusion TCGA_RNA-Seq CCDC176-IGKC CCDC176 chr14 74489701 + IGKC chr2 89157196 - Exonic hg19 HNSC TCGA-BB-4228 600 0 Out-of-frame Inter-chr p11.2 29367 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57697534 + VMP1 chr17 57915656 + Exonic hg19 HNSC TCGA-DQ-5630 36 139 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 29368 ChimerSeq STARFusion TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105614953 - OBFC1 chr10 105642599 - Exonic hg19 HNSC TCGA-DQ-5630 23 76 Out-of-frame Intra-chr q24.33 Seq+ 29369 ChimerSeq STARFusion TCGA_RNA-Seq DCLRE1C-OR7E26P DCLRE1C chr10 14991035 - OR7E26P chr10 15042005 - Exonic hg19 HNSC TCGA-DQ-5630 13 39 Out-of-frame Intra-chr p13 p13 Seq+ 29370 ChimerSeq STARFusion TCGA_RNA-Seq OAZ1-SF3A2 OAZ1 chr19 2269743 + SF3A2 chr19 2246752 + Exonic hg19 HNSC TCGA-DQ-5630 5 20 Out-of-frame Intra-chr p13.3 p13.3 29371 ChimerSeq STARFusion TCGA_RNA-Seq SWAP70-WEE1 SWAP70 chr11 9715833 + WEE1 chr11 9603079 + Exonic hg19 HNSC TCGA-DQ-5630 2 10 Out-of-frame Intra-chr p15.4 p15.4 Seq+ 29372 ChimerSeq STARFusion TCGA_RNA-Seq VSTM2L-RPRD1B VSTM2L chr20 36561991 + RPRD1B chr20 36718128 + Exonic hg19 HNSC TCGA-DQ-5631 4 24 In-Frame Intra-chr q11.23 q11.23 Seq+ 29373 ChimerSeq STARFusion TCGA_RNA-Seq CDH13-HSBP1 CDH13 chr16 83520260 + HSBP1 chr16 83842285 + Exonic hg19 HNSC TCGA-DQ-5631 2 10 In-Frame Intra-chr q23.3 Tumor suppressor gene q23.3 Seq+ 29374 ChimerSeq STARFusion TCGA_RNA-Seq SFN-KRT14 SFN chr1 27190780 + KRT14 chr17 39742836 - Exonic hg19 HNSC TCGA-CQ-7068 3 21 Out-of-frame Inter-chr p36.11 Tumor suppressor gene q21.2 29375 ChimerSeq STARFusion TCGA_RNA-Seq LAMB3-NAMPT LAMB3 chr1 209795881 - NAMPT chr7 105894950 - Exonic hg19 HNSC TCGA-CV-7433 19 23 Out-of-frame Inter-chr q32.2 q22.3 Seq+ 29376 ChimerSeq STARFusion TCGA_RNA-Seq ITGAL-KRT14 ITGAL chr16 30531249 + KRT14 chr17 39743147 - Exonic hg19 HNSC TCGA-CV-7433 8 1 CDS-5'UTR Inter-chr p11.2 q21.2 29377 ChimerSeq STARFusion TCGA_RNA-Seq MFF-COL4A3 MFF chr2 228193505 + COL4A3 chr2 228147081 + Exonic hg19 HNSC TCGA-CV-7433 6 6 5'UTR-CDS Intra-chr q36.3 q36.3 Seq+ 29378 ChimerSeq STARFusion TCGA_RNA-Seq CCDC144NL-NCOR1P3 CCDC144NL chr17 20770484 - NCOR1P3 chr7 57659430 + Exonic hg19 HNSC TCGA-CV-7433 3 11 Out-of-frame Inter-chr p11.2 p11.2 29379 ChimerSeq STARFusion TCGA_RNA-Seq COASY-IGHA2 COASY chr17 40714608 + IGHA2 chr14 106054734 - Exonic hg19 HNSC TCGA-BB-4217 35 1 Out-of-frame Inter-chr q21.2 29380 ChimerSeq STARFusion TCGA_RNA-Seq GPX3-IGHG2 GPX3 chr5 150400491 + IGHG2 chr14 106111129 - Exonic hg19 HNSC TCGA-BB-4217 14 2 Out-of-frame Inter-chr q33.1 Tumor suppressor gene 29381 ChimerSeq STARFusion TCGA_RNA-Seq GCN1L1-IGKC GCN1L1 chr12 120583096 - IGKC chr2 89161433 - Exonic hg19 HNSC TCGA-BB-4217 9 1 Out-of-frame Inter-chr p11.2 29382 ChimerSeq STARFusion TCGA_RNA-Seq TNKS1BP1-IGHG2 TNKS1BP1 chr11 57067183 - IGHG2 chr14 106111128 - Exonic hg19 HNSC TCGA-BB-4217 8 2 Out-of-frame Inter-chr q12.1 29383 ChimerSeq STARFusion TCGA_RNA-Seq TUBD1-INPP5D TUBD1 chr17 57963444 - INPP5D chr2 234091056 + Exonic hg19 HNSC TCGA-BB-4217 5 14 Out-of-frame Inter-chr q23.1 Seq+ 29384 ChimerSeq STARFusion TCGA_RNA-Seq EAPP-USP13 EAPP chr14 34993903 - USP13 chr3 179447977 + Exonic hg19 HNSC TCGA-BB-4217 4 17 In-Frame Inter-chr q13.1 q26.33 Seq+ 29385 ChimerSeq STARFusion TCGA_RNA-Seq PHF21A-GLIS2 PHF21A chr11 45967391 - GLIS2 chr16 4386726 + Exonic hg19 HNSC TCGA-CN-6994 4 29 Out-of-frame Inter-chr p11.2 Transcription factor p13.3 Transcription factor Seq+ 29386 ChimerSeq STARFusion TCGA_RNA-Seq ANO1-FOLR3 ANO1 chr11 69978185 + FOLR3 chr11 71846993 + Exonic hg19 HNSC TCGA-CN-6995 3 33 5'UTR-5'UTR Intra-chr q13.3 q13.4 Seq+ 29387 ChimerSeq STARFusion TCGA_RNA-Seq LYN-NTRK3 LYN chr8 56866543 + NTRK3 chr15 88576276 - Exonic hg19 HNSC TCGA-CN-6997 41 146 In-Frame Inter-chr q12.1 TK:Src q25.3 Oncogene Tumor suppressor gene Seq+ 29388 ChimerSeq STARFusion TCGA_RNA-Seq CCAT1-CASC8 CCAT1 chr8 128231055 - CASC8 chr8 128302305 - Exonic hg19 HNSC TCGA-CN-6992 4 13 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 29389 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-UNC5D TPX2 chr20 30330450 + UNC5D chr8 35406810 + Exonic hg19 HNSC TCGA-CN-6992 3 7 5'UTR-CDS Inter-chr q11.21 p12 Tumor suppressor gene Seq+ 29390 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-HSF2BP TMPRSS2 chr21 42843733 - HSF2BP chr21 44949842 - Exonic hg19 HNSC TCGA-P3-A6T8 46 121 In-Frame Intra-chr q22.3 q22.3 Seq+ 29391 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-HSF2BP TMPRSS2 chr21 42845252 - HSF2BP chr21 44949842 - Exonic hg19 HNSC TCGA-P3-A6T8 18 121 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 29392 ChimerSeq STARFusion TCGA_RNA-Seq SLC35G2-IL20RB SLC35G2 chr3 136538056 + IL20RB chr3 136699308 + Exonic hg19 HNSC TCGA-P3-A6T8 8 43 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 29393 ChimerSeq STARFusion TCGA_RNA-Seq SLC35G2-IL20RB SLC35G2 chr3 136538205 + IL20RB chr3 136699308 + Exonic hg19 HNSC TCGA-P3-A6T8 4 43 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 29394 ChimerSeq STARFusion TCGA_RNA-Seq EIF3A-TBC1D1 EIF3A chr10 120809313 - TBC1D1 chr4 38091553 + Exonic hg19 HNSC TCGA-P3-A6T8 7 6 Out-of-frame Inter-chr q26.11 p14 Seq+ 29395 ChimerSeq STARFusion TCGA_RNA-Seq AGO1-SLC25A3P1 AGO1 chr1 36367938 + SLC25A3P1 chr1 53881196 - Exonic hg19 HNSC TCGA-P3-A6T8 3 8 Out-of-frame Intra-chr p34.3 p32.3 Seq+ 29396 ChimerSeq STARFusion TCGA_RNA-Seq RPSAP52-HMGA2 RPSAP52 chr12 66220623 - HMGA2 chr12 66221781 + Exonic hg19 HNSC TCGA-P3-A6T8 2 6 3'UTR-CDS Intra-chr q14.3 q14.3 Transcription factor 29397 ChimerSeq STARFusion TCGA_RNA-Seq FAM214A-ARPP19 FAM214A chr15 52970203 - ARPP19 chr15 52849419 - Exonic hg19 HNSC TCGA-CN-4729 9 52 Out-of-frame Intra-chr q21.3 q21.2 29398 ChimerSeq STARFusion TCGA_RNA-Seq FAM214A-ARPP19 FAM214A chr15 52970203 - ARPP19 chr15 52856443 - Exonic hg19 HNSC TCGA-CN-4729 4 47 Out-of-frame Intra-chr q21.3 q21.2 29399 ChimerSeq STARFusion TCGA_RNA-Seq ELP2-MOCOS ELP2 chr18 33710034 + MOCOS chr18 33831122 + Exonic hg19 HNSC TCGA-CN-4729 6 13 Out-of-frame Intra-chr q12.2 q12.2 29400 ChimerSeq STARFusion TCGA_RNA-Seq SUZ12P-ATAD5 SUZ12P chr17 29062115 + ATAD5 chr17 29167635 + Exonic hg19 HNSC TCGA-CN-4729 2 11 Out-of-frame Intra-chr q11.2 29401 ChimerSeq STARFusion TCGA_RNA-Seq NLGN4Y-VAMP7 NLGN4Y chrY 16734471 + VAMP7 chrX 155169365 + Exonic hg19 HNSC TCGA-CN-4728 5 14 5'UTR-5'UTR Inter-chr q11.221 q28 Seq+ 29402 ChimerSeq STARFusion TCGA_RNA-Seq COL1A1-PRKAG2 COL1A1 chr17 48266737 - PRKAG2 chr7 151329786 - Exonic hg19 HNSC TCGA-CN-4728 7 1 Out-of-frame Inter-chr q21.33 Oncogene q36.1 29403 ChimerSeq STARFusion TCGA_RNA-Seq NLGN4Y-VAMP7 NLGN4Y chrY 16734471 + VAMP7 chrY 59272371 + Exonic hg19 HNSC TCGA-CN-4728 2 6 In-Frame Intra-chr q11.221 q28 Seq+ 29404 ChimerSeq STARFusion TCGA_RNA-Seq SLAIN2-CWH43 SLAIN2 chr4 48385801 + CWH43 chr4 49005752 + Exonic hg19 HNSC TCGA-CN-4725 20 180 In-Frame Intra-chr p11 p11 Seq+ 29405 ChimerSeq STARFusion TCGA_RNA-Seq SLAIN2-CWH43 SLAIN2 chr4 48396670 + CWH43 chr4 49005752 + Exonic hg19 HNSC TCGA-CN-4725 17 174 Out-of-frame Intra-chr p11 p11 Seq+ 29406 ChimerSeq STARFusion TCGA_RNA-Seq SLAIN2-CWH43 SLAIN2 chr4 48385801 + CWH43 chr4 49009218 + Exonic hg19 HNSC TCGA-CN-4725 16 174 In-Frame Intra-chr p11 p11 Seq+ 29407 ChimerSeq STARFusion TCGA_RNA-Seq SLAIN2-CWH43 SLAIN2 chr4 48396670 + CWH43 chr4 49009218 + Exonic hg19 HNSC TCGA-CN-4725 4 174 Out-of-frame Intra-chr p11 p11 Seq+ 29408 ChimerSeq STARFusion TCGA_RNA-Seq MTAP-UBA52P6 MTAP chr9 21854869 + UBA52P6 chr9 22012127 + Exonic hg19 HNSC TCGA-CN-4725 7 50 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.3 29409 ChimerSeq STARFusion TCGA_RNA-Seq TUBA1B-KRT6A TUBA1B chr12 49522277 - KRT6A chr12 52881337 - Exonic hg19 HNSC TCGA-CN-4725 3 15 Out-of-frame Intra-chr q13.12 q13.13 29410 ChimerSeq STARFusion TCGA_RNA-Seq BIRC6-SPAST BIRC6 chr2 32774548 + SPAST chr2 32372287 + Exonic hg19 HNSC TCGA-F7-A624 5 13 In-Frame Intra-chr p22.3 p22.3 Seq+ 29411 ChimerSeq STARFusion TCGA_RNA-Seq PRSS23-LGALS12 PRSS23 chr11 86534635 + LGALS12 chr11 63277935 + Exonic hg19 HNSC TCGA-P3-A6T5 8 26 3'UTR-CDS Intra-chr q14.2 q12.3 Seq+ 29412 ChimerSeq STARFusion TCGA_RNA-Seq DNM1-LCN2 DNM1 chr9 130965910 + LCN2 chr9 130913917 + Exonic hg19 HNSC TCGA-CN-4723 36 126 In-Frame Intra-chr q34.11 q34.11 Seq+ 29413 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0319L-DLGAP3 KIAA0319L chr1 36019951 - DLGAP3 chr1 35334690 - Exonic hg19 HNSC TCGA-CN-4723 12 79 Out-of-frame Intra-chr p34.3 p34.3 Seq+ 29414 ChimerSeq STARFusion TCGA_RNA-Seq CACNA2D1-NAALADL2 CACNA2D1 chr7 81964451 - NAALADL2 chr3 175455094 + Exonic hg19 HNSC TCGA-CN-4723 11 15 In-Frame Inter-chr q21.11 q26.31 Seq+ 29415 ChimerSeq STARFusion TCGA_RNA-Seq FAT1-ACSL1 FAT1 chr4 187627717 - ACSL1 chr4 185724700 - Exonic hg19 HNSC TCGA-CN-4722 216 588 CDS-5'UTR Intra-chr q35.2 Tumor suppressor gene q35.1 Seq+ 29416 ChimerSeq STARFusion TCGA_RNA-Seq PLXDC2-KRT5 PLXDC2 chr10 20105754 + KRT5 chr12 52911462 - Exonic hg19 HNSC TCGA-CN-4722 16 1 Out-of-frame Inter-chr p12.31 q13.13 29417 ChimerSeq STARFusion TCGA_RNA-Seq KRT16-KIF13B KRT16 chr17 39767891 - KIF13B chr8 29005037 - Exonic hg19 HNSC TCGA-CN-4722 11 2 Out-of-frame Inter-chr q21.2 p12 29418 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106111129 - Exonic hg19 HNSC TCGA-CN-4722 10 1 Out-of-frame Inter-chr q37.3 29419 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106136184 - Exonic hg19 HNSC TCGA-CN-4722 9 1 Out-of-frame Inter-chr q37.3 29420 ChimerSeq STARFusion TCGA_RNA-Seq IL20RA-KRT6A IL20RA chr6 137323231 - KRT6A chr12 52884737 - Exonic hg19 HNSC TCGA-CN-4722 7 3 In-Frame Inter-chr q23.3 q13.13 29421 ChimerSeq STARFusion TCGA_RNA-Seq CASP1-TTC6 CASP1 chr11 104903791 - TTC6 chr14 38271299 + Exonic hg19 HNSC TCGA-F7-8489 3 44 Out-of-frame Inter-chr q22.3 q21.1 Seq+ 29422 ChimerSeq STARFusion TCGA_RNA-Seq RACGAP1-CERS5 RACGAP1 chr12 50419181 - CERS5 chr12 50537840 - Exonic hg19 HNSC TCGA-BB-7862 2 25 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 29423 ChimerSeq STARFusion TCGA_RNA-Seq KRT14-ANKRD52 KRT14 chr17 39743048 - ANKRD52 chr12 56633589 - Exonic hg19 HNSC TCGA-BB-7863 16 1 Out-of-frame Inter-chr q21.2 q13.3 29424 ChimerSeq STARFusion TCGA_RNA-Seq S100A9-KRT6A S100A9 chr1 153333164 + KRT6A chr12 52884442 - Exonic hg19 HNSC TCGA-BB-7863 4 49 Out-of-frame Inter-chr q21.3 q13.13 29425 ChimerSeq STARFusion TCGA_RNA-Seq RPL23-KRT5 RPL23 chr17 37008020 - KRT5 chr12 52913546 - Exonic hg19 HNSC TCGA-BB-7863 7 2 Out-of-frame Inter-chr q12 q13.13 29426 ChimerSeq STARFusion TCGA_RNA-Seq BIRC3-IGH@ BIRC3 chr11 102207478 + IGH@ chr14 106330469 - Exonic hg19 HNSC TCGA-BB-7861 29 1 Out-of-frame Inter-chr q22.2 Oncogene 32.33 29427 ChimerSeq STARFusion TCGA_RNA-Seq GNB2L1-IGH@ GNB2L1 chr5 180666510 - IGH@ chr14 106209410 - Exonic hg19 HNSC TCGA-BB-7861 8 10 Out-of-frame Inter-chr Tumor suppressor gene 32.33 29428 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-KIAA1211 PUM1 chr1 31465237 - KIAA1211 chr4 57189543 + Exonic hg19 HNSC TCGA-BB-7861 7 14 Out-of-frame Inter-chr p35.2 q12 Seq+ 29429 ChimerSeq STARFusion TCGA_RNA-Seq GNB2L1-IGHG1 GNB2L1 chr5 180666510 - IGHG1 chr14 106209410 - Exonic hg19 HNSC TCGA-BB-7861 8 7 Out-of-frame Inter-chr Tumor suppressor gene q32.33 29430 ChimerSeq STARFusion TCGA_RNA-Seq GNB2L1-IGH@ GNB2L1 chr5 180666510 - IGH@ chr14 106111129 - Exonic hg19 HNSC TCGA-BB-7861 7 9 Out-of-frame Inter-chr Tumor suppressor gene 32.33 29431 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-MAPKBP1 IGH@ chr14 106967048 - MAPKBP1 chr15 42104815 + Exonic hg19 HNSC TCGA-BB-7861 7 3 Out-of-frame Inter-chr 32.33 q15.1 29432 ChimerSeq STARFusion TCGA_RNA-Seq GNB2L1-IGH@ GNB2L1 chr5 180666510 - IGH@ chr14 106237745 - Exonic hg19 HNSC TCGA-BB-7861 3 8 Out-of-frame Inter-chr Tumor suppressor gene 32.33 29433 ChimerSeq STARFusion TCGA_RNA-Seq GNB2L1-IGHG1 GNB2L1 chr5 180666510 - IGHG1 chr14 106237745 - Exonic hg19 HNSC TCGA-BB-7861 3 7 Out-of-frame Inter-chr Tumor suppressor gene q32.33 29434 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-NOTCH1 IGH@ chr14 106134591 - NOTCH1 chr9 139403429 - Exonic hg19 HNSC TCGA-BB-7861 3 6 Out-of-frame Inter-chr 32.33 q34.3 Oncogene Tumor suppressor gene 29435 ChimerSeq STARFusion TCGA_RNA-Seq TMLHE-NEDD9 TMLHE chrX 154743647 - NEDD9 chr6 11193925 - Exonic hg19 HNSC TCGA-BB-7861 2 8 Out-of-frame Inter-chr q28 p24.2 Seq+ 29436 ChimerSeq STARFusion TCGA_RNA-Seq EIF2S2-NCOA6 EIF2S2 chr20 32686304 - NCOA6 chr20 33331145 - Exonic hg19 HNSC TCGA-BB-7866 15 51 In-Frame Intra-chr q11.22 q11.22 Seq+ 29437 ChimerSeq STARFusion TCGA_RNA-Seq TAF4-STX16 TAF4 chr20 60572606 - STX16 chr20 57242546 + Exonic hg19 HNSC TCGA-BB-7866 2 42 In-Frame Intra-chr q13.32 Seq+ 29438 ChimerSeq STARFusion TCGA_RNA-Seq KRT14-ANKRD52 KRT14 chr17 39743048 - ANKRD52 chr12 56633589 - Exonic hg19 HNSC TCGA-BB-7864 10 1 Out-of-frame Inter-chr q21.2 q13.3 29439 ChimerSeq STARFusion TCGA_RNA-Seq METTL16-DHX8 METTL16 chr17 2376818 - DHX8 chr17 41566817 + Exonic hg19 HNSC TCGA-F7-8298 8 7 In-Frame Intra-chr p13.3 q21.31 Seq+ 29440 ChimerSeq STARFusion TCGA_RNA-Seq HELZ-WIPF2 HELZ chr17 65235549 - WIPF2 chr17 38412643 + Exonic hg19 HNSC TCGA-F7-8298 2 20 5'UTR-5'UTR Intra-chr q24.2 q21.2 Seq+ 29441 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-RBFOX2 MYH9 chr22 36678759 - RBFOX2 chr22 36142608 - Exonic hg19 HNSC TCGA-P3-A5QA 30 48 In-Frame Intra-chr q12.3 Oncogene Tumor suppressor gene Seq+ 29442 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB49-IGKC ZBTB49 chr4 4292080 + IGKC chr2 89160115 - Exonic hg19 HNSC TCGA-P3-A6SW 13 0 Out-of-frame Inter-chr p16.3 Transcription factor p11.2 29443 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB49-IGKJ5 ZBTB49 chr4 4292080 + IGKJ5 chr2 89160115 - Exonic hg19 HNSC TCGA-P3-A6SW 13 0 Out-of-frame Inter-chr p16.3 Transcription factor p11.2 Seq+ 29444 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525072 - IGHG1 chr14 106209410 - Exonic hg19 HNSC TCGA-P3-A6SW 12 0 Out-of-frame Inter-chr q34 Oncogene q32.33 29445 ChimerSeq STARFusion TCGA_RNA-Seq TAS1R2-IGL@ TAS1R2 chr1 19184032 - IGL@ chr22 23241805 + Exonic hg19 HNSC TCGA-P3-A6SW 11 0 Out-of-frame Inter-chr p36.13 q11.22 29446 ChimerSeq STARFusion TCGA_RNA-Seq TAS1R2-IGLJ2 TAS1R2 chr1 19184032 - IGLJ2 chr22 23241805 + Exonic hg19 HNSC TCGA-P3-A6SW 11 0 Out-of-frame Inter-chr p36.13 q11.22 29447 ChimerSeq STARFusion TCGA_RNA-Seq TAS1R2-IGLC2 TAS1R2 chr1 19184032 - IGLC2 chr22 23241805 + Exonic hg19 HNSC TCGA-P3-A6SW 8 0 Out-of-frame Inter-chr p36.13 q11.22 29448 ChimerSeq STARFusion TCGA_RNA-Seq MIDN-HMGB2P1 MIDN chr19 1255693 + HMGB2P1 chr19 1203271 + Exonic hg19 HNSC TCGA-P3-A6SW 3 5 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 29449 ChimerSeq STARFusion TCGA_RNA-Seq KRT15-USP6NL KRT15 chr17 39672161 - USP6NL chr10 11504699 - Exonic hg19 HNSC TCGA-P3-A5QE 9 1 Out-of-frame Inter-chr q21.2 p14 29450 ChimerSeq STARFusion TCGA_RNA-Seq CPSF1-VPS28 CPSF1 chr8 145624978 - VPS28 chr8 145649305 - Exonic hg19 HNSC TCGA-P3-A5QF 9 20 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 29451 ChimerSeq STARFusion TCGA_RNA-Seq CXCL1-AFP CXCL1 chr4 74735706 + AFP chr4 74319482 + Exonic hg19 HNSC TCGA-IQ-A61I 6 15 5'UTR-5'UTR Intra-chr q13.3 q13.3 Seq+ 29452 ChimerSeq STARFusion TCGA_RNA-Seq GRHL2-CRMP1 GRHL2 chr8 102505017 + CRMP1 chr4 5830395 - Exonic hg19 HNSC TCGA-IQ-A61H 77 209 Out-of-frame Inter-chr q22.3 Transcription factor p16.2 Seq+ 29453 ChimerSeq STARFusion TCGA_RNA-Seq ITGAL-KRT16 ITGAL chr16 30531249 + KRT16 chr17 39769017 - Exonic hg19 HNSC TCGA-IQ-A61J 11 1 Out-of-frame Inter-chr p11.2 q21.2 29454 ChimerSeq STARFusion TCGA_RNA-Seq KRT14-ANKRD52 KRT14 chr17 39743050 - ANKRD52 chr12 56633591 - Exonic hg19 HNSC TCGA-IQ-A61E 10 1 Out-of-frame Inter-chr q21.2 q13.3 29455 ChimerSeq STARFusion TCGA_RNA-Seq USP14-THOC1 USP14 chr18 180339 + THOC1 chr18 216633 - Exonic hg19 HNSC TCGA-IQ-A61G 5 92 In-Frame Intra-chr p11.32 p11.32 Seq+ 29456 ChimerSeq STARFusion TCGA_RNA-Seq ASNSD1-PMS1 ASNSD1 chr2 190526336 + PMS1 chr2 190708690 + Exonic hg19 HNSC TCGA-IQ-A61G 6 32 5'UTR-CDS Intra-chr q32.2 q32.2 Oncogene Seq+ 29457 ChimerSeq STARFusion TCGA_RNA-Seq EML3-INTS5 EML3 chr11 62372585 - INTS5 chr11 62417471 - Exonic hg19 HNSC TCGA-IQ-A61G 2 6 In-Frame Intra-chr q12.3 q12.3 Seq+ 29458 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG3 STK25 chr2 242434915 - IGHG3 chr14 106237745 - Exonic hg19 HNSC TCGA-CR-5249 74 1 Out-of-frame Inter-chr q37.3 29459 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGH@ HOMER2 chr15 83561493 - IGH@ chr14 106209410 - Exonic hg19 HNSC TCGA-CR-5249 29 2 Out-of-frame Inter-chr q25.2 Tumor suppressor gene 32.33 29460 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGH@ HOMER2 chr15 83561493 - IGH@ chr14 106136184 - Exonic hg19 HNSC TCGA-CR-5249 26 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene 32.33 29461 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGH@ HOMER2 chr15 83561493 - IGH@ chr14 106237745 - Exonic hg19 HNSC TCGA-CR-5249 25 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene 32.33 29462 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGH@ HOMER2 chr15 83561493 - IGH@ chr14 106092405 - Exonic hg19 HNSC TCGA-CR-5249 21 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene 32.33 29463 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-PANK3 IGL@ chr22 23199026 + PANK3 chr5 167995681 - Exonic hg19 HNSC TCGA-CR-5249 9 1 Out-of-frame Inter-chr q11.22 q34 29464 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC20-IGHG1 ZDHHC20 chr13 22033369 - IGHG1 chr14 106209411 - Exonic hg19 HNSC TCGA-CR-5249 7 2 Out-of-frame Inter-chr q12.11 q32.33 29465 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-HIVEP3 IGHG1 chr14 106207994 - HIVEP3 chr1 41978892 - Exonic hg19 HNSC TCGA-CR-5249 6 2 Out-of-frame Inter-chr q32.33 p34.2 Tumor suppressor gene Transcription factor 29466 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A8-IGHM SLC7A8 chr14 23624430 - IGHM chr14 106330462 - Exonic hg19 HNSC TCGA-CR-5248 52 1 Out-of-frame Intra-chr q11.2 q32.33 29467 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGHA2 INTS1 chr7 1511982 - IGHA2 chr14 106054735 - Exonic hg19 HNSC TCGA-CR-5248 6 1 Out-of-frame Inter-chr p22.3 29468 ChimerSeq STARFusion TCGA_RNA-Seq LIMK1-IGHM LIMK1 chr7 73507525 + IGHM chr14 106330851 - Exonic hg19 HNSC TCGA-CR-5248 6 1 Out-of-frame Inter-chr q11.23 TKL:LISK q32.33 29469 ChimerSeq STARFusion TCGA_RNA-Seq UBXN1-IGHG3 UBXN1 chr11 62444098 - IGHG3 chr14 106330460 - Exonic hg19 HNSC TCGA-CR-5248 5 1 Out-of-frame Inter-chr q12.3 29470 ChimerSeq STARFusion TCGA_RNA-Seq PLXND1-TMCC1 PLXND1 chr3 129324172 - TMCC1 chr3 129390107 - Exonic hg19 HNSC TCGA-CR-5248 2 7 In-Frame Intra-chr q22.1 q22.1 KB Seq+ 29471 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1A1-ARHGEF37 CSNK1A1 chr5 148929638 - ARHGEF37 chr5 148980671 + Exonic hg19 HNSC TCGA-BB-A5HZ 2 8 Out-of-frame Intra-chr q32 Tumor suppressor gene q32 Seq+ 29472 ChimerSeq STARFusion TCGA_RNA-Seq DTX2-ZP3 DTX2 chr7 76093026 + ZP3 chr7 76054369 + Exonic hg19 HNSC TCGA-BB-A5HY 7 76 5'UTR-5'UTR Intra-chr q11.23 Seq+ 29473 ChimerSeq STARFusion TCGA_RNA-Seq SIN3A-SNUPN SIN3A chr15 75743764 - SNUPN chr15 75913397 - Exonic hg19 HNSC TCGA-BB-A5HY 17 36 5'UTR-5'UTR Intra-chr q24.2 q24.2 Seq+ 29474 ChimerSeq STARFusion TCGA_RNA-Seq CCND3-C6orf132 CCND3 chr6 42016239 - C6orf132 chr6 42078029 - Exonic hg19 HNSC TCGA-BB-A5HY 8 26 5'UTR-CDS Intra-chr p21.1 p21.1 Seq+ 29475 ChimerSeq STARFusion TCGA_RNA-Seq SIN3A-SNUPN SIN3A chr15 75748129 - SNUPN chr15 75913397 - Exonic hg19 HNSC TCGA-BB-A5HY 4 36 5'UTR-5'UTR Intra-chr q24.2 q24.2 Seq+ 29476 ChimerSeq STARFusion TCGA_RNA-Seq RPS10-ITPR3 RPS10 chr6 34392446 - ITPR3 chr6 33623543 + Exonic hg19 HNSC TCGA-P3-A6SX 5 43 In-Frame Intra-chr p21.31 p21.31 Seq+ 29477 ChimerSeq STARFusion TCGA_RNA-Seq CSAD-NPFF CSAD chr12 53574351 - NPFF chr12 53900926 - Exonic hg19 HNSC TCGA-P3-A6SX 2 9 5'UTR-CDS Intra-chr q13.13 q13.13 Seq+ 29478 ChimerSeq STARFusion TCGA_RNA-Seq SAMD9-CCDC132 SAMD9 chr7 92744108 - CCDC132 chr7 92869179 + Exonic hg19 HNSC TCGA-P3-A6SX 2 6 5'UTR-5'UTR Intra-chr q21.2 Oncogene Seq+ 29479 ChimerSeq STARFusion TCGA_RNA-Seq ZNF43-IGKC ZNF43 chr19 21990463 - IGKC chr2 89160115 - Exonic hg19 HNSC TCGA-CR-5243 145 0 Out-of-frame Inter-chr p12 Transcription factor p11.2 29480 ChimerSeq STARFusion TCGA_RNA-Seq ZNF43-IGKJ5 ZNF43 chr19 21990463 - IGKJ5 chr2 89160115 - Exonic hg19 HNSC TCGA-CR-5243 145 0 Out-of-frame Inter-chr p12 Transcription factor p11.2 29481 ChimerSeq STARFusion TCGA_RNA-Seq WDHD1-IGKC WDHD1 chr14 55454092 - IGKC chr2 89161074 - Exonic hg19 HNSC TCGA-CR-5243 142 1 Out-of-frame Inter-chr q22.3 p11.2 29482 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CSDE1 IGH@ chr14 106452669 - CSDE1 chr1 115266638 - Exonic hg19 HNSC TCGA-CR-5243 101 4 Out-of-frame Inter-chr 32.33 p13.2 29483 ChimerSeq STARFusion TCGA_RNA-Seq NR1H2-IGHG3 NR1H2 chr19 50879726 + IGHG3 chr14 106330065 - Exonic hg19 HNSC TCGA-CR-5243 25 1 Out-of-frame Inter-chr q13.33 Transcription factor 29484 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK4-ANKRD34C EIF2AK4 chr15 40241469 + ANKRD34C chr15 79585583 + Exonic hg19 HNSC TCGA-CR-5243 5 23 CDS-5'UTR Intra-chr q15.1 q25.1 Seq+ 29485 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-NOTCH1 IGHG1 chr14 106134590 - NOTCH1 chr9 139403428 - Exonic hg19 HNSC TCGA-CR-5243 7 4 Out-of-frame Inter-chr q32.33 q34.3 Oncogene Tumor suppressor gene 29486 ChimerSeq STARFusion TCGA_RNA-Seq RXRA-IGHG2 RXRA chr9 137326057 + IGHG2 chr14 106111066 - Exonic hg19 HNSC TCGA-CR-5243 6 2 Out-of-frame Inter-chr q34.2 Transcription factor 29487 ChimerSeq STARFusion TCGA_RNA-Seq CLN3-C15orf32 CLN3 chr16 28495327 - C15orf32 chr15 93043588 + Exonic hg19 HNSC TCGA-CR-5247 5 18 Out-of-frame Inter-chr p12.1 q26.1 Seq+ 29488 ChimerSeq STARFusion TCGA_RNA-Seq CLN3-C15orf32 CLN3 chr16 28495327 - C15orf32 chr15 93043588 + Exonic hg19 HNSC TCGA-CR-5247 5 18 Out-of-frame Inter-chr p12.1 q26.1 Seq+ 29489 ChimerSeq STARFusion TCGA_RNA-Seq TFDP2-COG5 TFDP2 chr3 141811903 - COG5 chr7 106964966 - Exonic hg19 HNSC TCGA-CR-5247 2 29 Out-of-frame Inter-chr q23 Transcription factor Seq+ 29490 ChimerSeq STARFusion TCGA_RNA-Seq PTPRD-IDO1 PTPRD chr9 8733780 - IDO1 chr8 39771408 + Exonic hg19 HNSC TCGA-CV-7407 13 68 CDS-5'UTR Inter-chr Oncogene Tumor suppressor gene p11.21 Seq+ 29491 ChimerSeq STARFusion TCGA_RNA-Seq PTPRD-IDO1 PTPRD chr9 8733780 - IDO1 chr8 39775394 + Exonic hg19 HNSC TCGA-CV-7407 4 66 Out-of-frame Inter-chr Oncogene Tumor suppressor gene p11.21 Seq+ 29492 ChimerSeq STARFusion TCGA_RNA-Seq TSHZ3-IFNL1 TSHZ3 chr19 31840086 - IFNL1 chr19 39787445 + Exonic hg19 HNSC TCGA-CV-7407 7 10 Out-of-frame Intra-chr q12 Transcription factor q13.2 Seq+ 29493 ChimerSeq STARFusion TCGA_RNA-Seq HACL1-METTL6 HACL1 chr3 15613175 - METTL6 chr3 15425694 - Exonic hg19 HNSC TCGA-CV-7407 2 21 CDS-3'UTR Intra-chr p25.1 p25.1 Seq+ 29494 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57768072 + VMP1 chr17 57895073 + Exonic hg19 HNSC TCGA-CV-7407 3 9 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 29495 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R21-GTF2A1L PPP1R21 chr2 48738607 + GTF2A1L chr2 48896861 + Exonic hg19 HNSC TCGA-CV-7407 4 5 In-Frame Intra-chr p16.3 p16.3 Seq+ 29496 ChimerSeq STARFusion TCGA_RNA-Seq FBXO28-LYZL2 FBXO28 chr1 224302098 + LYZL2 chr10 30901829 - Exonic hg19 HNSC TCGA-CV-7406 13 51 Out-of-frame Inter-chr q42.11 p11.23 Seq+ 29497 ChimerSeq STARFusion TCGA_RNA-Seq PDE5A-C4orf3 PDE5A chr4 120517678 - C4orf3 chr4 120219934 - Exonic hg19 HNSC TCGA-CV-7406 2 27 Out-of-frame Intra-chr q26 q26 Seq+ 29498 ChimerSeq STARFusion TCGA_RNA-Seq TNKS1BP1-IGH@ TNKS1BP1 chr11 57067185 - IGH@ chr14 106111130 - Exonic hg19 HNSC TCGA-DQ-7593 25 3 Out-of-frame Inter-chr q12.1 32.33 29499 ChimerSeq STARFusion TCGA_RNA-Seq TNKS1BP1-IGH@ TNKS1BP1 chr11 57067183 - IGH@ chr14 106209409 - Exonic hg19 HNSC TCGA-DQ-7593 19 3 Out-of-frame Inter-chr q12.1 32.33 29500 ChimerSeq STARFusion TCGA_RNA-Seq TNKS1BP1-IGH@ TNKS1BP1 chr11 57067183 - IGH@ chr14 106136183 - Exonic hg19 HNSC TCGA-DQ-7593 14 3 Out-of-frame Inter-chr q12.1 32.33 29501 ChimerSeq STARFusion TCGA_RNA-Seq WDR11-PDLIM1 WDR11 chr10 122664928 + PDLIM1 chr10 97031541 - Exonic hg19 HNSC TCGA-DQ-7593 5 22 In-Frame Intra-chr q26.12 Tumor suppressor gene q23.33 Seq+ 29502 ChimerSeq STARFusion TCGA_RNA-Seq TNKS1BP1-IGH@ TNKS1BP1 chr11 57067179 - IGH@ chr14 106092400 - Exonic hg19 HNSC TCGA-DQ-7593 8 3 Out-of-frame Inter-chr q12.1 32.33 29503 ChimerSeq STARFusion TCGA_RNA-Seq TNKS1BP1-IGH@ TNKS1BP1 chr11 57067185 - IGH@ chr14 106237746 - Exonic hg19 HNSC TCGA-DQ-7593 8 3 Out-of-frame Inter-chr q12.1 32.33 29504 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGH@ INTS1 chr7 1511981 - IGH@ chr14 106209410 - Exonic hg19 HNSC TCGA-DQ-7593 7 2 Out-of-frame Inter-chr p22.3 32.33 29505 ChimerSeq STARFusion TCGA_RNA-Seq TNKS1BP1-IGH@ TNKS1BP1 chr11 57067179 - IGH@ chr14 106237740 - Exonic hg19 HNSC TCGA-DQ-7593 5 3 Out-of-frame Inter-chr q12.1 32.33 29506 ChimerSeq STARFusion TCGA_RNA-Seq KRT13-OBSCN KRT13 chr17 39661308 - OBSCN chr1 228461542 + Exonic hg19 HNSC TCGA-HD-A6HZ 4 1 Out-of-frame Inter-chr q21.2 q42.13 29507 ChimerSeq STARFusion TCGA_RNA-Seq TRAK2-KCTD18 TRAK2 chr2 202285140 - KCTD18 chr2 201371814 - Exonic hg19 HNSC TCGA-CV-7409 7 57 CDS-5'UTR Intra-chr q33.1 q33.1 Seq+ 29508 ChimerSeq STARFusion TCGA_RNA-Seq HSPG2-IGKC HSPG2 chr1 22155341 - IGKC chr2 89161070 - Exonic hg19 HNSC TCGA-H7-A6C5 6 1 Out-of-frame Inter-chr p36.12 p11.2 29509 ChimerSeq STARFusion TCGA_RNA-Seq KRT6A-HSPB1 KRT6A chr12 52864916 - HSPB1 chr7 75933124 + Exonic hg19 HNSC TCGA-CV-A6K1 8 1 Out-of-frame Inter-chr q13.13 q11.23 29510 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-KRT16 ACTB chr7 5569207 - KRT16 chr17 39766486 - Exonic hg19 HNSC TCGA-CV-A6K1 7 4 Out-of-frame Inter-chr p22.1 q21.2 29511 ChimerSeq STARFusion TCGA_RNA-Seq SFN-YWHAG SFN chr1 27190112 + YWHAG chr7 75959255 - Exonic hg19 HNSC TCGA-CV-A6K1 3 20 Out-of-frame Inter-chr p36.11 Tumor suppressor gene q11.23 29512 ChimerSeq STARFusion TCGA_RNA-Seq KRT6A-HSPB1 KRT6A chr12 52843253 - HSPB1 chr7 75933124 + Exonic hg19 HNSC TCGA-CV-A6K1 6 1 Out-of-frame Inter-chr q13.13 q11.23 29513 ChimerSeq STARFusion TCGA_RNA-Seq GSTP1-KRT14 GSTP1 chr11 67352630 + KRT14 chr17 39739709 - Exonic hg19 HNSC TCGA-CV-A6K1 3 11 Out-of-frame Inter-chr q13.2 Tumor suppressor gene q21.2 29514 ChimerSeq STARFusion TCGA_RNA-Seq MED16-IGHG1 MED16 chr19 886075 - IGHG1 chr14 106209410 - Exonic hg19 HNSC TCGA-CR-7388 7 2 Out-of-frame Inter-chr p13.3 q32.33 29515 ChimerSeq STARFusion TCGA_RNA-Seq OLFM2-COL5A3 OLFM2 chr19 10046980 - COL5A3 chr19 10080358 - Exonic hg19 HNSC TCGA-CR-7388 3 14 In-Frame Intra-chr p13.2 p13.2 Seq+ 29516 ChimerSeq STARFusion TCGA_RNA-Seq TRAP1-IGKC TRAP1 chr16 3711994 - IGKC chr2 89157198 - Exonic hg19 HNSC TCGA-CR-7388 6 2 Out-of-frame Inter-chr p13.3 p11.2 29517 ChimerSeq STARFusion TCGA_RNA-Seq RAP1GDS1-GSTCD RAP1GDS1 chr4 99273752 + GSTCD chr4 106766598 + Exonic hg19 HNSC TCGA-CR-7388 4 9 In-Frame Intra-chr q23 q24 Seq+ 29518 ChimerSeq STARFusion TCGA_RNA-Seq ESPL1-IGKC ESPL1 chr12 53679899 + IGKC chr2 89161434 - Exonic hg19 HNSC TCGA-CR-7388 5 1 Out-of-frame Inter-chr q13.13 p11.2 29519 ChimerSeq STARFusion TCGA_RNA-Seq P4HB-IGKC P4HB chr17 79801847 - IGKC chr2 89160764 - Exonic hg19 HNSC TCGA-CR-7388 5 1 Out-of-frame Inter-chr q25.3 p11.2 29520 ChimerSeq STARFusion TCGA_RNA-Seq PLA2G4B-IGHA1 PLA2G4B chr15 42139700 + IGHA1 chr14 106175004 - Exonic hg19 HNSC TCGA-CR-7388 5 1 Out-of-frame Inter-chr q15.1 29521 ChimerSeq STARFusion TCGA_RNA-Seq KMT2B-IGH@ KMT2B chr19 36219030 + IGH@ chr14 106330459 - Exonic hg19 HNSC TCGA-CR-7389 51 0 Out-of-frame Inter-chr q13.12 Oncogene Transcription factor 32.33 29522 ChimerSeq STARFusion TCGA_RNA-Seq KMT2B-IGHG3 KMT2B chr19 36219030 + IGHG3 chr14 106330459 - Exonic hg19 HNSC TCGA-CR-7389 51 0 Out-of-frame Inter-chr q13.12 Oncogene Transcription factor 29523 ChimerSeq STARFusion TCGA_RNA-Seq KMT2B-IGHJ4 KMT2B chr19 36219030 + IGHJ4 chr14 106330459 - Exonic hg19 HNSC TCGA-CR-7389 51 0 Out-of-frame Inter-chr q13.12 Oncogene Transcription factor 29524 ChimerSeq STARFusion TCGA_RNA-Seq KMT2B-IGH@ KMT2B chr19 36219029 + IGH@ chr14 106330059 - Exonic hg19 HNSC TCGA-CR-7389 50 0 Out-of-frame Inter-chr q13.12 Oncogene Transcription factor 32.33 29525 ChimerSeq STARFusion TCGA_RNA-Seq KMT2B-IGHG3 KMT2B chr19 36219029 + IGHG3 chr14 106330059 - Exonic hg19 HNSC TCGA-CR-7389 50 0 Out-of-frame Inter-chr q13.12 Oncogene Transcription factor 29526 ChimerSeq STARFusion TCGA_RNA-Seq UBE3C-PTPRN2 UBE3C chr7 156932032 + PTPRN2 chr7 157997965 - Exonic hg19 HNSC TCGA-CR-7389 8 47 Out-of-frame Intra-chr q36.3 q36.3 Seq+ 29527 ChimerSeq STARFusion TCGA_RNA-Seq XG-RNASEH2CP1 XG chrX 2692780 + RNASEH2CP1 chrY 2657790 + Exonic hg19 HNSC TCGA-CR-7389 3 28 Out-of-frame Inter-chr p22.33 p11.2 29528 ChimerSeq STARFusion TCGA_RNA-Seq LINC00176-IGKJ2 LINC00176 chr20 62671235 + IGKJ2 chr2 89161067 - Exonic hg19 HNSC TCGA-CR-7389 9 0 Out-of-frame Inter-chr p11.2 29529 ChimerSeq STARFusion TCGA_RNA-Seq C1QB-IGHG4 C1QB chr1 22988036 + IGHG4 chr14 106136195 - Exonic hg19 HNSC TCGA-CR-7389 8 1 Out-of-frame Inter-chr p36.12 29530 ChimerSeq STARFusion TCGA_RNA-Seq ADAM17-ITGB1BP1 ADAM17 chr2 9695638 - ITGB1BP1 chr2 9558861 - Exonic hg19 HNSC TCGA-CR-7389 2 12 CDS-5'UTR Intra-chr p25.1 p25.1 Seq+ 29531 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242522 + KRT14 chr17 39742780 - Exonic hg19 HNSC TCGA-CR-7386 6 12 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29532 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242532 + KRT14 chr17 39768618 - Exonic hg19 HNSC TCGA-CR-7386 5 9 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29533 ChimerSeq STARFusion TCGA_RNA-Seq RNH1-HRAS RNH1 chr11 507113 - HRAS chr11 533944 - Exonic hg19 HNSC TCGA-CR-7382 53 317 5'UTR-CDS Intra-chr Tumor suppressor gene p15.5 Oncogene Seq+ 29534 ChimerSeq STARFusion TCGA_RNA-Seq RNH1-HRAS RNH1 chr11 507113 - HRAS chr11 534375 - Exonic hg19 HNSC TCGA-CR-7382 36 316 5'UTR-5'UTR Intra-chr Tumor suppressor gene p15.5 Oncogene Seq+ 29535 ChimerSeq STARFusion TCGA_RNA-Seq RNH1-HRAS RNH1 chr11 506609 - HRAS chr11 533944 - Exonic hg19 HNSC TCGA-CR-7382 12 316 5'UTR-CDS Intra-chr Tumor suppressor gene p15.5 Oncogene Seq+ 29536 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-GLOD4 YWHAE chr17 1303341 - GLOD4 chr17 674701 - Exonic hg19 HNSC TCGA-CR-7383 74 306 In-Frame Intra-chr p13.3 p13.3 Seq+ 29537 ChimerSeq STARFusion TCGA_RNA-Seq DCUN1D4-GPM6B DCUN1D4 chr4 52729875 + GPM6B chrX 13803927 - Exonic hg19 HNSC TCGA-CR-7383 9 49 In-Frame Inter-chr q12 p22.2 Seq+ 29538 ChimerSeq STARFusion TCGA_RNA-Seq DCUN1D4-GPM6B DCUN1D4 chr4 52729875 + GPM6B chrX 13825888 - Exonic hg19 HNSC TCGA-CR-7383 2 49 In-Frame Inter-chr q12 p22.2 Seq+ 29539 ChimerSeq STARFusion TCGA_RNA-Seq FAT2-ATOX1 FAT2 chr5 150913970 - ATOX1 chr5 151133455 - Exonic hg19 HNSC TCGA-CR-7380 3 23 Out-of-frame Intra-chr q33.1 q33.1 Seq+ 29540 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242532 + KRT14 chr17 39768618 - Exonic hg19 HNSC TCGA-CR-7380 4 12 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29541 ChimerSeq STARFusion TCGA_RNA-Seq IDH3A-SH2D7 IDH3A chr15 78441772 + SH2D7 chr15 78386458 + Exonic hg19 HNSC TCGA-CR-7380 4 2 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 29542 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-AHDC1 WASF2 chr1 27816497 - AHDC1 chr1 27885394 - Exonic hg19 HNSC TCGA-UF-A7J9 13 70 5'UTR-5'UTR Intra-chr p36.11 p35.3 Transcription factor Seq+ 29543 ChimerSeq STARFusion TCGA_RNA-Seq RASSF8-ARNTL2 RASSF8 chr12 26221856 + ARNTL2 chr12 27553467 + Exonic hg19 HNSC TCGA-UF-A7J9 5 10 3'UTR-CDS Intra-chr p12.1 Tumor suppressor gene p11.23 Transcription factor Seq+ 29544 ChimerSeq STARFusion TCGA_RNA-Seq CENPC-STAP1 CENPC chr4 68383874 - STAP1 chr4 68424470 + Exonic hg19 HNSC TCGA-CV-7248 20 110 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 29545 ChimerSeq STARFusion TCGA_RNA-Seq DST-FBLN5 DST chr6 56368795 - FBLN5 chr14 92403545 - Exonic hg19 HNSC TCGA-CV-7248 20 51 Out-of-frame Inter-chr p12.1 Oncogene q32.12 Seq+ 29546 ChimerSeq STARFusion TCGA_RNA-Seq KIF7-IGL@ KIF7 chr15 90174918 - IGL@ chr22 23247166 + Exonic hg19 HNSC TCGA-CV-7248 16 1 Out-of-frame Inter-chr q26.1 Tumor suppressor gene q11.22 29547 ChimerSeq STARFusion TCGA_RNA-Seq MPP6-OSBPL3 MPP6 chr7 24663403 + OSBPL3 chr7 24903218 - Exonic hg19 HNSC TCGA-CV-7248 6 23 Out-of-frame Intra-chr p15.3 p15.3 Seq+ 29548 ChimerSeq STARFusion TCGA_RNA-Seq SRRM2-PRSS33 SRRM2 chr16 2810500 + PRSS33 chr16 2836605 - Exonic hg19 HNSC TCGA-CV-7247 6 48 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 29549 ChimerSeq STARFusion TCGA_RNA-Seq SRRM2-PRSS33 SRRM2 chr16 2810500 + PRSS33 chr16 2836122 - Exonic hg19 HNSC TCGA-CV-7247 4 48 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 29550 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242532 + KRT14 chr17 39768618 - Exonic hg19 HNSC TCGA-CV-7247 4 7 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29551 ChimerSeq STARFusion TCGA_RNA-Seq PANX1-HEPHL1 PANX1 chr11 93862659 + HEPHL1 chr11 93826667 + Exonic hg19 HNSC TCGA-CV-7247 2 15 Out-of-frame Intra-chr q21 q21 Seq+ 29552 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57760375 + VMP1 chr17 57915656 + Exonic hg19 HNSC TCGA-HD-7917 15 68 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 29553 ChimerSeq STARFusion TCGA_RNA-Seq S100A9-KRT17 S100A9 chr1 153333413 + KRT17 chr17 39780390 - Exonic hg19 HNSC TCGA-HD-7917 3 41 Out-of-frame Inter-chr q21.3 q21.2 29554 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 HNSC TCGA-CV-7245 19 9 In-Frame Intra-chr p13.3 p13.3 29555 ChimerSeq STARFusion TCGA_RNA-Seq TNNI1-MYH2 TNNI1 chr1 201383646 - MYH2 chr17 10433391 - Exonic hg19 HNSC TCGA-CV-7245 2 9 In-Frame Inter-chr q32.1 p13.1 29556 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-KRT14 MYH9 chr22 36691036 - KRT14 chr17 39739692 - Exonic hg19 HNSC TCGA-CV-7243 9 35 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene q21.2 29557 ChimerSeq STARFusion TCGA_RNA-Seq KRT14-PCOLCE KRT14 chr17 39738548 - PCOLCE chr7 100202261 + Exonic hg19 HNSC TCGA-CV-7243 7 2 Out-of-frame Inter-chr q21.2 q22.1 29558 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242532 + KRT14 chr17 39742770 - Exonic hg19 HNSC TCGA-CV-7243 4 12 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29559 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242522 + KRT14 chr17 39742780 - Exonic hg19 HNSC TCGA-CV-7243 3 9 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29560 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT6C EGFR chr7 55224331 + KRT6C chr12 52863558 - Exonic hg19 HNSC TCGA-CV-7243 4 5 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q13.13 29561 ChimerSeq STARFusion TCGA_RNA-Seq LYN-TGS1 LYN chr8 56879456 + TGS1 chr8 56723440 + Exonic hg19 HNSC TCGA-CV-7242 6 20 In-Frame Intra-chr q12.1 TK:Src q12.1 Tumor suppressor gene 29562 ChimerSeq STARFusion TCGA_RNA-Seq DNAH17-TMC6 DNAH17 chr17 76525554 - TMC6 chr17 76109705 - Exonic hg19 HNSC TCGA-UF-A7JH 3 5 In-Frame Intra-chr q25.3 q25.3 29563 ChimerSeq STARFusion TCGA_RNA-Seq POMK-ANK1 POMK chr8 42958973 + ANK1 chr8 41591587 - Exonic hg19 HNSC TCGA-UF-A7JK 9 26 Out-of-frame Intra-chr p11.21 p11.21 Seq+ 29564 ChimerSeq STARFusion TCGA_RNA-Seq ARIH1-SENP8 ARIH1 chr15 72847704 + SENP8 chr15 72431918 + Exonic hg19 HNSC TCGA-UF-A7JK 3 11 CDS-5'UTR Intra-chr q24.1 q23 Seq+ 29565 ChimerSeq STARFusion TCGA_RNA-Seq SNHG6-PPP1R42 SNHG6 chr8 67837672 - PPP1R42 chr8 67923066 - Exonic hg19 HNSC TCGA-UF-A7JD 15 39 3'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 29566 ChimerSeq STARFusion TCGA_RNA-Seq POGZ-SLC6A13 POGZ chr1 151395873 - SLC6A13 chr12 352979 - Exonic hg19 HNSC TCGA-UF-A7JD 5 13 In-Frame Inter-chr q21.3 p13.33 Seq+ 29567 ChimerSeq STARFusion TCGA_RNA-Seq SLFN5-CDK5RAP3 SLFN5 chr17 33570162 + CDK5RAP3 chr17 46050885 + Exonic hg19 HNSC TCGA-UF-A7JD 3 16 5'UTR-CDS Intra-chr q12 q21.32 Seq+ 29568 ChimerSeq STARFusion TCGA_RNA-Seq SMIM15-ELOVL7 SMIM15 chr5 60456915 - ELOVL7 chr5 60095057 - Exonic hg19 HNSC TCGA-UF-A7JD 2 11 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 29569 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-SLC9B1P2 EGFR chr7 55223639 + SLC9B1P2 chr2 92102247 - Exonic hg19 HNSC TCGA-UF-A7JD 3 3 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene p11.1 29570 ChimerSeq STARFusion TCGA_RNA-Seq KRT14-FBXO31 KRT14 chr17 39739346 - FBXO31 chr16 87369055 - Exonic hg19 HNSC TCGA-D6-A6EK 5 1 Out-of-frame Inter-chr q21.2 q24.2 Tumor suppressor gene 29571 ChimerSeq STARFusion TCGA_RNA-Seq KRT6A-PI3 KRT6A chr12 52881309 - PI3 chr20 43803560 + Exonic hg19 HNSC TCGA-D6-A6EK 3 8 Out-of-frame Inter-chr q13.13 q13.12 29572 ChimerSeq STARFusion TCGA_RNA-Seq CD74-IGKC CD74 chr5 149786608 - IGKC chr2 89160767 - Exonic hg19 HNSC TCGA-D6-A6EM 7 1 Out-of-frame Inter-chr q33.1 p11.2 29573 ChimerSeq STARFusion TCGA_RNA-Seq NCK1-STAG1 NCK1 chr3 136664594 + STAG1 chr3 136240259 - Exonic hg19 HNSC TCGA-UF-A7JA 9 51 In-Frame Intra-chr q22.3 q22.3 Seq+ 29574 ChimerSeq STARFusion TCGA_RNA-Seq NCK1-STAG1 NCK1 chr3 136647069 + STAG1 chr3 136240259 - Exonic hg19 HNSC TCGA-UF-A7JA 2 51 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 29575 ChimerSeq STARFusion TCGA_RNA-Seq STAG1-SPSB4 STAG1 chr3 136117591 - SPSB4 chr3 140865984 + Exonic hg19 HNSC TCGA-UF-A7JA 4 7 Out-of-frame Intra-chr q22.3 q23 Seq+ 29576 ChimerSeq STARFusion TCGA_RNA-Seq STAG1-SPSB4 STAG1 chr3 136117591 - SPSB4 chr3 140851031 + Exonic hg19 HNSC TCGA-UF-A7JA 2 7 Out-of-frame Intra-chr q22.3 q23 Seq+ 29577 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC11-ING2 TRAPPC11 chr4 184600639 + ING2 chr4 184431435 + Exonic hg19 HNSC TCGA-UF-A7JA 3 3 Out-of-frame Intra-chr q35.1 q35.1 Tumor suppressor gene Seq+ 29578 ChimerSeq STARFusion TCGA_RNA-Seq PRKCD-SLC4A8 PRKCD chr3 53224017 + SLC4A8 chr12 51883484 + Exonic hg19 HNSC TCGA-UF-A7JA 2 5 In-Frame Inter-chr p21.1 Tumor suppressor gene q13.13 Seq+ 29579 ChimerSeq STARFusion TCGA_RNA-Seq FAM160A1-C4orf27 FAM160A1 chr4 152330617 + C4orf27 chr4 170674986 - Exonic hg19 HNSC TCGA-D6-A6EO 6 31 5'UTR-CDS Intra-chr q31.3 Seq+ 29580 ChimerSeq STARFusion TCGA_RNA-Seq KRT6A-IGH@ KRT6A chr12 52882113 - IGH@ chr14 106208313 - Exonic hg19 HNSC TCGA-D6-A6EO 3 7 Out-of-frame Inter-chr q13.13 32.33 29581 ChimerSeq STARFusion TCGA_RNA-Seq MINK1-ALOX12 MINK1 chr17 4736935 + ALOX12 chr17 6903655 + Exonic hg19 HNSC TCGA-D6-A6EN 6 25 In-Frame Intra-chr p13.2 p13.1 Seq+ 29582 ChimerSeq STARFusion TCGA_RNA-Seq HAP1-TMSB10 HAP1 chr17 39877794 - TMSB10 chr2 85132808 + Exonic hg19 HNSC TCGA-D6-A6EN 5 1 Out-of-frame Inter-chr q21.2 p11.2 29583 ChimerSeq STARFusion TCGA_RNA-Seq TMSB10-HAP1 TMSB10 chr2 85133241 + HAP1 chr17 39877727 - Exonic hg19 HNSC TCGA-D6-A6EN 3 5 CDS-3'UTR Inter-chr p11.2 q21.2 29584 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-PRR4 IGH@ chr14 106174426 - PRR4 chr12 10999764 - Exonic hg19 HNSC TCGA-CN-5360 3 50 Out-of-frame Inter-chr 32.33 29585 ChimerSeq STARFusion TCGA_RNA-Seq IGHA1-PRR4 IGHA1 chr14 106174426 - PRR4 chr12 10999764 - Exonic hg19 HNSC TCGA-CN-5360 3 26 Out-of-frame Inter-chr 29586 ChimerSeq STARFusion TCGA_RNA-Seq RNF217-TPD52L1 RNF217 chr6 125398004 + TPD52L1 chr6 125541224 + Exonic hg19 HNSC TCGA-CN-5361 2 5 In-Frame Intra-chr q22.31 q22.31 29587 ChimerSeq STARFusion TCGA_RNA-Seq KRT5-TMSB4X KRT5 chr12 52908879 - TMSB4X chrX 12993229 + Exonic hg19 HNSC TCGA-CN-5366 3 6 Out-of-frame Inter-chr q13.13 p22.2 29588 ChimerSeq STARFusion TCGA_RNA-Seq CPT1A-SUV420H1 CPT1A chr11 68566686 - SUV420H1 chr11 67934645 - Exonic hg19 HNSC TCGA-CN-5367 31 88 Out-of-frame Intra-chr q13.3 29589 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-GUCY1A2 FCHSD2 chr11 72851076 - GUCY1A2 chr11 106856857 - Exonic hg19 HNSC TCGA-CN-5367 11 89 Out-of-frame Intra-chr q13.4 q22.3 Oncogene Seq+ 29590 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-GUCY1A2 FCHSD2 chr11 72851076 - GUCY1A2 chr11 106944487 - Exonic hg19 HNSC TCGA-CN-5367 3 85 CDS-5'UTR Intra-chr q13.4 q22.3 Oncogene Seq+ 29591 ChimerSeq STARFusion TCGA_RNA-Seq MAX-RUNX2 MAX chr14 65560426 - RUNX2 chr6 45405684 + Exonic hg19 HNSC TCGA-CN-5367 7 40 Out-of-frame Inter-chr q23.3 Oncogene Tumor suppressor gene Transcription factor p21.1 Tumor suppressor gene Transcription factor Seq+ 29592 ChimerSeq STARFusion TCGA_RNA-Seq PLXDC2-KRT6A PLXDC2 chr10 20105754 + KRT6A chr12 52911462 - Exonic hg19 HNSC TCGA-CN-5367 11 1 Out-of-frame Inter-chr p12.31 q13.13 29593 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1377-YAP1 KIAA1377 chr11 101793491 + YAP1 chr11 102033187 + Exonic hg19 HNSC TCGA-CN-5367 8 12 In-Frame Intra-chr q22.1 Tumor suppressor gene 29594 ChimerSeq STARFusion TCGA_RNA-Seq PLXDC2-KRT6A PLXDC2 chr10 20105754 + KRT6A chr12 52884441 - Exonic hg19 HNSC TCGA-CN-5367 10 1 Out-of-frame Inter-chr p12.31 q13.13 29595 ChimerSeq STARFusion TCGA_RNA-Seq RUNX2-MAX RUNX2 chr6 45399756 + MAX chr14 65544754 - Exonic hg19 HNSC TCGA-CN-5367 3 6 Out-of-frame Inter-chr p21.1 Tumor suppressor gene Transcription factor q23.3 Oncogene Tumor suppressor gene Transcription factor Seq+ 29596 ChimerSeq STARFusion TCGA_RNA-Seq PTPN1-P2RX4 PTPN1 chr20 49127127 + P2RX4 chr12 121654937 + Exonic hg19 HNSC TCGA-CN-5364 11 49 Out-of-frame Inter-chr q13.13 Tumor suppressor gene q24.31 Seq+ 29597 ChimerSeq STARFusion TCGA_RNA-Seq PTPN1-P2RX4 PTPN1 chr20 49127127 + P2RX4 chr12 121659716 + Exonic hg19 HNSC TCGA-CN-5364 2 48 In-Frame Inter-chr q13.13 Tumor suppressor gene q24.31 Seq+ 29598 ChimerSeq STARFusion TCGA_RNA-Seq PLXDC2-KRT5 PLXDC2 chr10 20105754 + KRT5 chr12 52911462 - Exonic hg19 HNSC TCGA-CN-5365 17 1 Out-of-frame Inter-chr p12.31 q13.13 29599 ChimerSeq STARFusion TCGA_RNA-Seq KRT14-RPL13AP25 KRT14 chr17 39739557 - RPL13AP25 chr13 55015225 - Exonic hg19 HNSC TCGA-CN-5365 5 6 Out-of-frame Inter-chr q21.2 q14.3 29600 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57733388 + VMP1 chr17 57915656 + Exonic hg19 HNSC TCGA-CN-5365 2 7 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 29601 ChimerSeq STARFusion TCGA_RNA-Seq PACS1-FOLH1 PACS1 chr11 65961044 + FOLH1 chr11 49179595 - Exonic hg19 HNSC TCGA-UF-A7JV 5 16 In-Frame Intra-chr q13.1 p11.12 Seq+ 29602 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-POMGNT1 IGH@ chr14 106518399 - POMGNT1 chr1 46657291 - Exonic hg19 HNSC TCGA-CN-5369 136 1 Out-of-frame Inter-chr 32.33 p34.1 29603 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SHROOM3 IGH@ chr14 106691680 - SHROOM3 chr4 77660257 + Exonic hg19 HNSC TCGA-CN-5369 108 1 Out-of-frame Inter-chr 32.33 q21.1 29604 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SHROOM3 IGH@ chr14 106725208 - SHROOM3 chr4 77660257 + Exonic hg19 HNSC TCGA-CN-5369 107 1 Out-of-frame Inter-chr 32.33 q21.1 29605 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-POMGNT1 IGH@ chr14 106815721 - POMGNT1 chr1 46657291 - Exonic hg19 HNSC TCGA-CN-5369 33 1 Out-of-frame Inter-chr 32.33 p34.1 29606 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-POMGNT1 IGH@ chr14 106691672 - POMGNT1 chr1 46657291 - Exonic hg19 HNSC TCGA-CN-5369 30 1 Out-of-frame Inter-chr 32.33 p34.1 29607 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SHROOM3 IGH@ chr14 107048678 - SHROOM3 chr4 77660258 + Exonic hg19 HNSC TCGA-CN-5369 26 1 Out-of-frame Inter-chr 32.33 q21.1 29608 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SHROOM3 IGH@ chr14 106815729 - SHROOM3 chr4 77660257 + Exonic hg19 HNSC TCGA-CN-5369 23 1 Out-of-frame Inter-chr 32.33 q21.1 29609 ChimerSeq STARFusion TCGA_RNA-Seq PPP4R1-IGH@ PPP4R1 chr18 9551779 - IGH@ chr14 106330472 - Exonic hg19 HNSC TCGA-CN-5369 20 1 Out-of-frame Inter-chr p11.22 32.33 29610 ChimerSeq STARFusion TCGA_RNA-Seq PPP4R1-IGHJ4 PPP4R1 chr18 9551779 - IGHJ4 chr14 106330472 - Exonic hg19 HNSC TCGA-CN-5369 20 1 Out-of-frame Inter-chr p11.22 29611 ChimerSeq STARFusion TCGA_RNA-Seq GRIN2A-IGKC GRIN2A chr16 9858701 - IGKC chr2 89161075 - Exonic hg19 HNSC TCGA-CN-5369 10 0 Out-of-frame Inter-chr p13.2 Tumor suppressor gene p11.2 29612 ChimerSeq STARFusion TCGA_RNA-Seq GRIN2A-IGKJ2 GRIN2A chr16 9858701 - IGKJ2 chr2 89161075 - Exonic hg19 HNSC TCGA-CN-5369 10 0 Out-of-frame Inter-chr p13.2 Tumor suppressor gene p11.2 29613 ChimerSeq STARFusion TCGA_RNA-Seq PLXDC2-KRT5 PLXDC2 chr10 20105754 + KRT5 chr12 52911462 - Exonic hg19 HNSC TCGA-CN-5369 8 1 Out-of-frame Inter-chr p12.31 q13.13 29614 ChimerSeq STARFusion TCGA_RNA-Seq SHANK3-IGH@ SHANK3 chr22 51143243 + IGH@ chr14 106330464 - Exonic hg19 HNSC TCGA-CN-5369 8 1 Out-of-frame Inter-chr 32.33 29615 ChimerSeq STARFusion TCGA_RNA-Seq HSPB11-NDC1 HSPB11 chr1 54389577 - NDC1 chr1 54238162 - Exonic hg19 HNSC TCGA-CV-6441 5 54 Out-of-frame Intra-chr p32.3 p32.3 Seq+ 29616 ChimerSeq STARFusion TCGA_RNA-Seq SLC3A2-POLR2G SLC3A2 chr11 62639141 + POLR2G chr11 62532654 + Exonic hg19 HNSC TCGA-CV-6441 2 41 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 29617 ChimerSeq STARFusion TCGA_RNA-Seq OPA3-EML2 OPA3 chr19 46087881 - EML2 chr19 46145610 - Exonic hg19 HNSC TCGA-CV-6441 3 30 In-Frame Intra-chr q13.32 q13.32 Seq+ 29618 ChimerSeq STARFusion TCGA_RNA-Seq ITCH-DEFB118 ITCH chr20 33059320 + DEFB118 chr20 29960660 + Exonic hg19 HNSC TCGA-CV-5443 47 258 Out-of-frame Intra-chr q11.22 q11.21 Seq+ 29619 ChimerSeq STARFusion TCGA_RNA-Seq C22orf39-IGHA2 C22orf39 chr22 19344505 - IGHA2 chr14 106054733 - Exonic hg19 HNSC TCGA-CV-5443 102 1 Out-of-frame Inter-chr q11.21 29620 ChimerSeq STARFusion TCGA_RNA-Seq GOLT1B-IGKC GOLT1B chr12 21670632 + IGKC chr2 89160431 - Exonic hg19 HNSC TCGA-CV-5443 18 1 Out-of-frame Inter-chr p12.1 p11.2 29621 ChimerSeq STARFusion TCGA_RNA-Seq TRA2B-IGHA1 TRA2B chr3 185636208 - IGHA1 chr14 106175004 - Exonic hg19 HNSC TCGA-CV-5443 7 2 Out-of-frame Inter-chr q27.2 29622 ChimerSeq STARFusion TCGA_RNA-Seq GOLT1B-IGKC GOLT1B chr12 21670632 + IGKC chr2 89161431 - Exonic hg19 HNSC TCGA-CV-5443 5 1 Out-of-frame Inter-chr p12.1 p11.2 29623 ChimerSeq STARFusion TCGA_RNA-Seq SLC26A11-OAF SLC26A11 chr17 78211393 + OAF chr11 120099577 + Exonic hg19 HNSC TCGA-CV-5443 2 11 In-Frame Inter-chr q25.3 q23.3 Seq+ 29624 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-RPL23 IGKC chr2 89156856 - RPL23 chr17 37009354 - Exonic hg19 HNSC TCGA-CV-5443 3 4 Out-of-frame Inter-chr p11.2 q12 29625 ChimerSeq STARFusion TCGA_RNA-Seq KRT14-PAXIP1 KRT14 chr17 39742571 - PAXIP1 chr7 154767870 - Exonic hg19 HNSC TCGA-CV-5442 10 1 Out-of-frame Inter-chr q21.2 q36.2 29626 ChimerSeq STARFusion TCGA_RNA-Seq FAM83G-GRAP FAM83G chr17 18906833 - GRAP chr17 18927696 - Exonic hg19 HNSC TCGA-CV-5440 2 29 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 29627 ChimerSeq STARFusion TCGA_RNA-Seq FHOD3-MS4A15 FHOD3 chr18 34267141 + MS4A15 chr11 60531179 + Exonic hg19 HNSC TCGA-CV-5440 3 12 CDS-5'UTR Inter-chr q12.2 q12.2 Seq+ 29628 ChimerSeq STARFusion TCGA_RNA-Seq DTD1-RALGAPA2 DTD1 chr20 18608877 + RALGAPA2 chr20 20527476 - Exonic hg19 HNSC TCGA-CV-5440 3 6 In-Frame Intra-chr p11.23 p11.23 Seq+ 29629 ChimerSeq STARFusion TCGA_RNA-Seq USP8-MYEF2 USP8 chr15 50782722 + MYEF2 chr15 48461036 - Exonic hg19 HNSC TCGA-CV-5440 2 9 In-Frame Intra-chr q21.2 q21.1 Seq+ 29630 ChimerSeq STARFusion TCGA_RNA-Seq PGAP1-ZDBF2 PGAP1 chr2 197735665 - ZDBF2 chr2 207169441 + Exonic hg19 HNSC TCGA-CV-7568 9 66 Out-of-frame Intra-chr q33.1 Seq+ 29631 ChimerSeq STARFusion TCGA_RNA-Seq PGAP1-ZDBF2 PGAP1 chr2 197737165 - ZDBF2 chr2 207169441 + Exonic hg19 HNSC TCGA-CV-7568 8 65 Out-of-frame Intra-chr q33.1 Seq+ 29632 ChimerSeq STARFusion TCGA_RNA-Seq PGAP1-ZDBF2 PGAP1 chr2 197729711 - ZDBF2 chr2 207169441 + Exonic hg19 HNSC TCGA-CV-7568 3 65 Out-of-frame Intra-chr q33.1 Seq+ 29633 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-KRT14 MYH9 chr22 36691037 - KRT14 chr17 39766802 - Exonic hg19 HNSC TCGA-CV-7568 8 23 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene q21.2 29634 ChimerSeq STARFusion TCGA_RNA-Seq RPL23-KRT5 RPL23 chr17 37008020 - KRT5 chr12 52913546 - Exonic hg19 HNSC TCGA-CV-7568 12 2 Out-of-frame Inter-chr q12 q13.13 29635 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-KRT14 MYH9 chr22 36691036 - KRT14 chr17 39739692 - Exonic hg19 HNSC TCGA-CV-7568 7 18 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene q21.2 29636 ChimerSeq STARFusion TCGA_RNA-Seq EEF1A1-KRT14 EEF1A1 chr6 74228278 - KRT14 chr17 39739907 - Exonic hg19 HNSC TCGA-CV-7568 3 25 Out-of-frame Inter-chr q13 Tumor suppressor gene q21.2 29637 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-KRT14 MYH9 chr22 36691037 - KRT14 chr17 39739706 - Exonic hg19 HNSC TCGA-CV-7568 4 18 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene q21.2 29638 ChimerSeq STARFusion TCGA_RNA-Seq PRR4-SPSB2 PRR4 chr12 11273609 - SPSB2 chr12 6991451 - Exonic hg19 HNSC TCGA-CV-5444 2 8 Out-of-frame Intra-chr p13.31 Seq+ 29639 ChimerSeq STARFusion TCGA_RNA-Seq PI3-KRT6A PI3 chr20 43805072 + KRT6A chr12 52887039 - Exonic hg19 HNSC TCGA-CR-7372 5 25 Out-of-frame Inter-chr q13.12 q13.13 29640 ChimerSeq STARFusion TCGA_RNA-Seq HSPB1-KRT14 HSPB1 chr7 75933413 + KRT14 chr17 39743146 - Exonic hg19 HNSC TCGA-CR-7372 3 21 Out-of-frame Inter-chr q11.23 q21.2 29641 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242540 + KRT14 chr17 39768611 - Exonic hg19 HNSC TCGA-CR-7372 3 13 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29642 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242522 + KRT14 chr17 39742780 - Exonic hg19 HNSC TCGA-CR-7372 3 11 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29643 ChimerSeq STARFusion TCGA_RNA-Seq SIK1-HUNK SIK1 chr21 44845287 - HUNK chr21 33312477 + Exonic hg19 HNSC TCGA-CR-7372 5 3 Out-of-frame Intra-chr q22.3 Tumor suppressor gene q22.11 CAMK:CAMKL Seq+ 29644 ChimerSeq STARFusion TCGA_RNA-Seq LRP5-ZNF317 LRP5 chr11 68080273 + ZNF317 chr19 9266601 + Exonic hg19 HNSC TCGA-IQ-7631 3 13 CDS-5'UTR Inter-chr q13.2 p13.2 Transcription factor Seq+ 29645 ChimerSeq STARFusion TCGA_RNA-Seq PWP2-TRAPPC10 PWP2 chr21 45544608 + TRAPPC10 chr21 45494205 + Exonic hg19 HNSC TCGA-IQ-7632 3 5 In-Frame Intra-chr q22.3 q22.3 Seq+ 29646 ChimerSeq STARFusion TCGA_RNA-Seq C10orf76-LDB1 C10orf76 chr10 103815842 - LDB1 chr10 103871293 - Exonic hg19 HNSC TCGA-F7-A61W 2 13 5'UTR-5'UTR Intra-chr q24.32 q24.32 Seq+ 29647 ChimerSeq STARFusion TCGA_RNA-Seq AKR1A1-AGO3 AKR1A1 chr1 46027550 + AGO3 chr1 36469942 + Exonic hg19 HNSC TCGA-F7-A61W 3 6 Out-of-frame Intra-chr p34.1 p34.3 Seq+ 29648 ChimerSeq STARFusion TCGA_RNA-Seq PRKRIRP9-IGL@ PRKRIRP9 chr4 45326001 - IGL@ chr22 23241805 + Exonic hg19 HNSC TCGA-CQ-5331 23 0 Out-of-frame Inter-chr q11.22 29649 ChimerSeq STARFusion TCGA_RNA-Seq PRKRIRP9-IGLJ2 PRKRIRP9 chr4 45326001 - IGLJ2 chr22 23241805 + Exonic hg19 HNSC TCGA-CQ-5331 23 0 Out-of-frame Inter-chr q11.22 29650 ChimerSeq STARFusion TCGA_RNA-Seq PRKRIRP9-IGLC2 PRKRIRP9 chr4 45326001 - IGLC2 chr22 23241805 + Exonic hg19 HNSC TCGA-CQ-5331 22 0 Out-of-frame Inter-chr q11.22 29651 ChimerSeq STARFusion TCGA_RNA-Seq PRKRIRP9-IGL@ PRKRIRP9 chr4 45326001 - IGL@ chr22 23247175 + Exonic hg19 HNSC TCGA-CQ-5331 19 0 Out-of-frame Inter-chr q11.22 29652 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-TRAC IGH@ chr14 107282989 - TRAC chr14 23016447 + Exonic hg19 HNSC TCGA-CQ-5331 3 33 Out-of-frame Intra-chr 32.33 q11.2 29653 ChimerSeq STARFusion TCGA_RNA-Seq PANX1-HEPHL1 PANX1 chr11 93862659 + HEPHL1 chr11 93844703 + Exonic hg19 HNSC TCGA-CQ-5332 4 41 In-Frame Intra-chr q21 q21 Seq+ 29654 ChimerSeq STARFusion TCGA_RNA-Seq PARP1-LIN9 PARP1 chr1 226561927 - LIN9 chr1 226438620 - Exonic hg19 HNSC TCGA-CQ-5332 4 10 In-Frame Intra-chr q42.12 Oncogene Tumor suppressor gene q42.12 Tumor suppressor gene Seq+ 29655 ChimerSeq STARFusion TCGA_RNA-Seq EPS8L2-AGPAT2 EPS8L2 chr11 709608 + AGPAT2 chr9 139569259 - Exonic hg19 HNSC TCGA-CQ-5333 96 544 Out-of-frame Inter-chr p15.5 q34.3 Seq+ 29656 ChimerSeq STARFusion TCGA_RNA-Seq EPS8L2-AGPAT2 EPS8L2 chr11 706288 + AGPAT2 chr9 139569259 - Exonic hg19 HNSC TCGA-CQ-5333 22 524 5'UTR-CDS Inter-chr p15.5 q34.3 Seq+ 29657 ChimerSeq STARFusion TCGA_RNA-Seq PDE7A-NRG1 PDE7A chr8 66691955 - NRG1 chr8 32585467 + Exonic hg19 HNSC TCGA-CQ-5334 4 23 In-Frame Intra-chr q13.1 p12 Seq+ 29658 ChimerSeq STARFusion TCGA_RNA-Seq FOXN2-PLB1 FOXN2 chr2 48541953 + PLB1 chr2 28863793 + Exonic hg19 HNSC TCGA-BA-7269 30 79 5'UTR-CDS Intra-chr p16.3 Transcription factor p23.2 Seq+ 29659 ChimerSeq STARFusion TCGA_RNA-Seq FOXN2-PLB1 FOXN2 chr2 48541953 + PLB1 chr2 28865724 + Exonic hg19 HNSC TCGA-BA-7269 10 78 5'UTR-CDS Intra-chr p16.3 Transcription factor p23.2 Seq+ 29660 ChimerSeq STARFusion TCGA_RNA-Seq MARK2-BPIFA2 MARK2 chr11 63607032 + BPIFA2 chr20 31765953 + Exonic hg19 HNSC TCGA-BA-7269 12 36 Out-of-frame Inter-chr q13.1 CAMK:CAMKL q11.21 Seq+ 29661 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-PARD6G TAOK1 chr17 27794234 + PARD6G chr18 77941033 - Exonic hg19 HNSC TCGA-BA-7269 6 12 Out-of-frame Inter-chr q11.2 q23 Seq+ 29662 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 HNSC TCGA-CV-7100 572 2158 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 29663 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808922 + TACC3 chr4 1741371 + Exonic hg19 HNSC TCGA-CV-7100 141 2158 Out-of-frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 29664 ChimerSeq STARFusion TCGA_RNA-Seq LDLR-HSH2D LDLR chr19 11200291 + HSH2D chr19 16263362 + Exonic hg19 HNSC TCGA-CV-7100 87 341 Out-of-frame Intra-chr p13.2 p13.11 Seq+ 29665 ChimerSeq STARFusion TCGA_RNA-Seq SART1-CNTN5 SART1 chr11 65735292 + CNTN5 chr11 99690275 + Exonic hg19 HNSC TCGA-CV-7100 6 21 Out-of-frame Intra-chr q13.1 q22.1 Seq+ 29666 ChimerSeq STARFusion TCGA_RNA-Seq SLC19A1-KRT4 SLC19A1 chr21 46951572 - KRT4 chr12 53207608 - Exonic hg19 HNSC TCGA-CV-7101 22 1 Out-of-frame Inter-chr q22.3 q13.13 29667 ChimerSeq STARFusion TCGA_RNA-Seq EFTUD1-CDADC1 EFTUD1 chr15 82507058 - CDADC1 chr13 49848427 + Exonic hg19 HNSC TCGA-CV-7102 11 24 In-Frame Inter-chr q14.2 Seq+ 29668 ChimerSeq STARFusion TCGA_RNA-Seq MGRN1-SNX29 MGRN1 chr16 4715152 + SNX29 chr16 12571576 + Exonic hg19 HNSC TCGA-CV-7102 4 11 In-Frame Intra-chr p13.3 p13.13 Seq+ 29669 ChimerSeq STARFusion TCGA_RNA-Seq JUP-LEPREL4 JUP chr17 39925221 - LEPREL4 chr17 39959683 - Exonic hg19 HNSC TCGA-CV-7103 5 41 Out-of-frame Intra-chr q21.2 Tumor suppressor gene 29670 ChimerSeq STARFusion TCGA_RNA-Seq KRT5-S100A8 KRT5 chr12 52913591 - S100A8 chr1 153362716 - Exonic hg19 HNSC TCGA-CV-7103 3 21 Out-of-frame Inter-chr q13.13 q21.3 29671 ChimerSeq STARFusion TCGA_RNA-Seq LAMA3-SNRPD1 LAMA3 chr18 21357583 + SNRPD1 chr18 19209023 + Exonic hg19 HNSC TCGA-CV-7104 38 270 In-Frame Intra-chr q11.2 q11.2 Seq+ 29672 ChimerSeq STARFusion TCGA_RNA-Seq LAMA3-SNRPD1 LAMA3 chr18 21357581 + SNRPD1 chr18 19209021 + Exonic hg19 HNSC TCGA-CV-7104 30 237 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 29673 ChimerSeq STARFusion TCGA_RNA-Seq KRT6A-PLCD3 KRT6A chr12 52840879 - PLCD3 chr17 43189939 - Exonic hg19 HNSC TCGA-CV-7104 5 2 Out-of-frame Inter-chr q13.13 q21.31 29674 ChimerSeq STARFusion TCGA_RNA-Seq FRMD6-BPIFB1 FRMD6 chr14 52037128 + BPIFB1 chr20 31873839 + Exonic hg19 HNSC TCGA-CQ-6227 14 287 5'UTR-5'UTR Inter-chr q22.1 q11.21 Seq+ 29675 ChimerSeq STARFusion TCGA_RNA-Seq FRMD6-BPIFB1 FRMD6 chr14 52037128 + BPIFB1 chr20 31869050 + Exonic hg19 HNSC TCGA-CQ-6227 8 279 5'UTR-5'UTR Inter-chr q22.1 q11.21 Seq+ 29676 ChimerSeq STARFusion TCGA_RNA-Seq FRMD6-BPIFB1 FRMD6 chr14 52037128 + BPIFB1 chr20 31866128 + Exonic hg19 HNSC TCGA-CQ-6227 3 279 5'UTR-5'UTR Inter-chr q22.1 q11.21 Seq+ 29677 ChimerSeq STARFusion TCGA_RNA-Seq FRMD6-BPIFB1 FRMD6 chr14 51956138 + BPIFB1 chr20 31873839 + Exonic hg19 HNSC TCGA-CQ-6227 3 279 5'UTR-5'UTR Inter-chr q22.1 q11.21 Seq+ 29678 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK4-EPB42 EIF2AK4 chr15 40231818 + EPB42 chr15 43495473 - Exonic hg19 HNSC TCGA-CQ-6225 3 17 Out-of-frame Intra-chr q15.1 q15.2 Seq+ 29679 ChimerSeq STARFusion TCGA_RNA-Seq EML4-MTA3 EML4 chr2 42396776 + MTA3 chr2 42883340 + Exonic hg19 HNSC TCGA-CQ-6225 3 10 In-Frame Intra-chr p21 Oncogene p21 29680 ChimerSeq STARFusion TCGA_RNA-Seq LINC00669-RAI14 LINC00669 chr18 37331293 - RAI14 chr5 34757573 + Exonic hg19 HNSC TCGA-CQ-6224 3 12 Out-of-frame Inter-chr p13.2 29681 ChimerSeq STARFusion TCGA_RNA-Seq TMEM189-IGH@ TMEM189 chr20 48770155 - IGH@ chr14 106330467 - Exonic hg19 HNSC TCGA-CQ-6223 9 1 Out-of-frame Inter-chr q13.13 32.33 29682 ChimerSeq STARFusion TCGA_RNA-Seq SGCD-LCP2 SGCD chr5 155771687 + LCP2 chr5 169724729 - Exonic hg19 HNSC TCGA-CQ-6221 7 11 CDS-5'UTR Intra-chr q33.2 q35.1 Seq+ 29683 ChimerSeq STARFusion TCGA_RNA-Seq SGCD-LCP2 SGCD chr5 155771687 + LCP2 chr5 169720376 - Exonic hg19 HNSC TCGA-CQ-6221 2 11 In-Frame Intra-chr q33.2 q35.1 Seq+ 29684 ChimerSeq STARFusion TCGA_RNA-Seq S100A9-KRT17 S100A9 chr1 153333416 + KRT17 chr17 39780388 - Exonic hg19 HNSC TCGA-CQ-6220 3 31 Out-of-frame Inter-chr q21.3 q21.2 29685 ChimerSeq STARFusion TCGA_RNA-Seq ANXA2-KRT6A ANXA2 chr15 60674541 - KRT6A chr12 52884737 - Exonic hg19 HNSC TCGA-CQ-6220 2 6 Out-of-frame Inter-chr q22.2 q13.13 29686 ChimerSeq STARFusion TCGA_RNA-Seq SYNE2-ITPK1 SYNE2 chr14 64486811 + ITPK1 chr14 93460342 - Exonic hg19 HNSC TCGA-CQ-6229 3 39 In-Frame Intra-chr q23.2 Seq+ 29687 ChimerSeq STARFusion TCGA_RNA-Seq PI3-KRT17 PI3 chr20 43805131 + KRT17 chr17 39776810 - Exonic hg19 HNSC TCGA-CQ-6229 3 31 3'UTR-CDS Inter-chr q13.12 q21.2 29688 ChimerSeq STARFusion TCGA_RNA-Seq PANX1-KIAA1377 PANX1 chr11 93886796 + KIAA1377 chr11 101814996 + Exonic hg19 HNSC TCGA-CQ-6228 31 126 Out-of-frame Intra-chr q21 Seq+ 29689 ChimerSeq STARFusion TCGA_RNA-Seq YIPF1-YTHDF2 YIPF1 chr1 54343988 - YTHDF2 chr1 29095441 + Exonic hg19 HNSC TCGA-CQ-6228 30 51 Out-of-frame Intra-chr p32.3 p35.3 Seq+ 29690 ChimerSeq STARFusion TCGA_RNA-Seq YIPF1-YTHDF2 YIPF1 chr1 54344315 - YTHDF2 chr1 29095441 + Exonic hg19 HNSC TCGA-CQ-6228 7 45 In-Frame Intra-chr p32.3 p35.3 Seq+ 29691 ChimerSeq STARFusion TCGA_RNA-Seq GALK2-C15orf43 GALK2 chr15 49584734 + C15orf43 chr15 45270687 + Exonic hg19 HNSC TCGA-CQ-6228 10 25 In-Frame Intra-chr q21.1 Seq+ 29692 ChimerSeq STARFusion TCGA_RNA-Seq EGLN1-C1orf131 EGLN1 chr1 231556744 - C1orf131 chr1 231374934 - Exonic hg19 HNSC TCGA-CQ-6228 6 28 Out-of-frame Intra-chr q42.2 Tumor suppressor gene q42.2 Seq+ 29693 ChimerSeq STARFusion TCGA_RNA-Seq ARID2-FRG1 ARID2 chr12 46125097 + FRG1 chr4 190873317 + Exonic hg19 HNSC TCGA-CQ-6228 2 23 Out-of-frame Inter-chr q12 Oncogene Tumor suppressor gene Transcription factor 29694 ChimerSeq STARFusion TCGA_RNA-Seq LYN-TGS1 LYN chr8 56879456 + TGS1 chr8 56723440 + Exonic hg19 HNSC TCGA-CQ-6228 3 17 In-Frame Intra-chr q12.1 TK:Src q12.1 Tumor suppressor gene 29695 ChimerSeq STARFusion TCGA_RNA-Seq LYST-DISC1 LYST chr1 235880012 - DISC1 chr1 231930988 + Exonic hg19 HNSC TCGA-CQ-6228 3 7 Out-of-frame Intra-chr q42.3 q42.2 Seq+ 29696 ChimerSeq STARFusion TCGA_RNA-Seq ZNF500-CORO7 ZNF500 chr16 4810493 - CORO7 chr16 4415546 - Exonic hg19 HNSC TCGA-CQ-6228 2 11 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 29697 ChimerSeq STARFusion TCGA_RNA-Seq YAP1-BIRC3 YAP1 chr11 102076805 + BIRC3 chr11 102192568 + Exonic hg19 HNSC TCGA-CQ-6228 2 8 CDS-5'UTR Intra-chr q22.1 Tumor suppressor gene q22.2 Oncogene 29698 ChimerSeq STARFusion TCGA_RNA-Seq YAP1-BIRC3 YAP1 chr11 102076817 + BIRC3 chr11 102192568 + Exonic hg19 HNSC TCGA-CQ-6228 2 8 CDS-5'UTR Intra-chr q22.1 Tumor suppressor gene q22.2 Oncogene 29699 ChimerSeq STARFusion TCGA_RNA-Seq EEF2-IGH@ EEF2 chr19 3984205 - IGH@ chr14 106209405 - Exonic hg19 HNSC TCGA-UF-A7JJ 42 5 Out-of-frame Inter-chr p13.3 32.33 29700 ChimerSeq STARFusion TCGA_RNA-Seq EEF2-IGHG1 EEF2 chr19 3984205 - IGHG1 chr14 106209405 - Exonic hg19 HNSC TCGA-UF-A7JJ 42 3 Out-of-frame Inter-chr p13.3 q32.33 29701 ChimerSeq STARFusion TCGA_RNA-Seq EEF2-IGH@ EEF2 chr19 3984205 - IGH@ chr14 106237740 - Exonic hg19 HNSC TCGA-UF-A7JJ 40 5 Out-of-frame Inter-chr p13.3 32.33 29702 ChimerSeq STARFusion TCGA_RNA-Seq EEF2-IGHG1 EEF2 chr19 3984205 - IGHG1 chr14 106237740 - Exonic hg19 HNSC TCGA-UF-A7JJ 37 3 Out-of-frame Inter-chr p13.3 q32.33 29703 ChimerSeq STARFusion TCGA_RNA-Seq EEF2-IGH@ EEF2 chr19 3984205 - IGH@ chr14 106136179 - Exonic hg19 HNSC TCGA-UF-A7JJ 31 5 Out-of-frame Inter-chr p13.3 32.33 29704 ChimerSeq STARFusion TCGA_RNA-Seq EEF2-IGH@ EEF2 chr19 3984205 - IGH@ chr14 106092400 - Exonic hg19 HNSC TCGA-UF-A7JJ 21 5 Out-of-frame Inter-chr p13.3 32.33 29705 ChimerSeq STARFusion TCGA_RNA-Seq AEBP2-PIK3C2G AEBP2 chr12 19626289 + PIK3C2G chr12 18762469 + Exonic hg19 HNSC TCGA-UF-A7JJ 6 2 Out-of-frame Intra-chr p12.3 Transcription factor p12.3 Seq+ 29706 ChimerSeq STARFusion TCGA_RNA-Seq PARP4-COL9A1 PARP4 chr13 25073439 - COL9A1 chr6 70993523 - Exonic hg19 HNSC TCGA-UF-A7JJ 2 16 In-Frame Inter-chr q12.12 q13 Seq+ 29707 ChimerSeq STARFusion TCGA_RNA-Seq RALY-PXMP4 RALY chr20 32581937 + PXMP4 chr20 32302542 - Exonic hg19 HNSC TCGA-QK-A6IJ 9 21 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 29708 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106209410 - Exonic hg19 HNSC TCGA-UF-A7JF 7 1 Out-of-frame Inter-chr q24.2 32.33 29709 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHG1 SLC7A5 chr16 87868137 - IGHG1 chr14 106209410 - Exonic hg19 HNSC TCGA-UF-A7JF 7 1 Out-of-frame Inter-chr q24.2 q32.33 29710 ChimerSeq STARFusion TCGA_RNA-Seq EP400-SFSWAP EP400 chr12 132476001 + SFSWAP chr12 132281723 + Exonic hg19 HNSC TCGA-CQ-7067 6 21 Out-of-frame Intra-chr q24.33 Oncogene q24.33 Seq+ 29711 ChimerSeq STARFusion TCGA_RNA-Seq HSPB1-KRT17 HSPB1 chr7 75933512 + KRT17 chr17 39776808 - Exonic hg19 HNSC TCGA-CQ-7067 3 25 Out-of-frame Inter-chr q11.23 q21.2 29712 ChimerSeq STARFusion TCGA_RNA-Seq EP400-SFSWAP EP400 chr12 132472435 + SFSWAP chr12 132281723 + Exonic hg19 HNSC TCGA-CQ-7067 2 21 Out-of-frame Intra-chr q24.33 Oncogene q24.33 Seq+ 29713 ChimerSeq STARFusion TCGA_RNA-Seq COLGALT1-PGLS COLGALT1 chr19 17670230 + PGLS chr19 17626982 + Exonic hg19 HNSC TCGA-CQ-7067 2 17 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 29714 ChimerSeq STARFusion TCGA_RNA-Seq NXN-WRAP53 NXN chr17 882559 - WRAP53 chr17 7604059 + Exonic hg19 HNSC TCGA-CQ-7065 24 173 In-Frame Intra-chr p13.3 p13.1 Seq+ 29715 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2-SPAG17 NOTCH2 chr1 120611948 - SPAG17 chr1 118524024 - Exonic hg19 HNSC TCGA-CQ-7065 6 125 In-Frame Intra-chr p12 Oncogene Tumor suppressor gene p12 Seq+ 29716 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2-SPAG17 NOTCH2 chr1 120611948 - SPAG17 chr1 118516184 - Exonic hg19 HNSC TCGA-CQ-7065 3 113 In-Frame Intra-chr p12 Oncogene Tumor suppressor gene p12 Seq+ 29717 ChimerSeq STARFusion TCGA_RNA-Seq BACH1-DSCR3 BACH1 chr21 30702014 + DSCR3 chr21 38612940 - Exonic hg19 HNSC TCGA-CQ-7065 5 25 In-Frame Intra-chr q21.3 Transcription factor q22.13 Seq+ 29718 ChimerSeq STARFusion TCGA_RNA-Seq KRT16-KIF13B KRT16 chr17 39767889 - KIF13B chr8 29005035 - Exonic hg19 HNSC TCGA-CQ-7065 7 1 Out-of-frame Inter-chr q21.2 p12 29719 ChimerSeq STARFusion TCGA_RNA-Seq KRT17-ECM1 KRT17 chr17 39779212 - ECM1 chr1 150482624 + Exonic hg19 HNSC TCGA-CQ-7065 3 5 Out-of-frame Inter-chr q21.2 q21.2 29720 ChimerSeq STARFusion TCGA_RNA-Seq FAT1-MTNR1A FAT1 chr4 187627717 - MTNR1A chr4 187455711 - Exonic hg19 HNSC TCGA-CV-7438 26 65 In-Frame Intra-chr q35.2 Tumor suppressor gene q35.2 29721 ChimerSeq STARFusion TCGA_RNA-Seq MPP7-ARMC4 MPP7 chr10 28491082 - ARMC4 chr10 28101554 - Exonic hg19 HNSC TCGA-CV-7438 4 45 In-Frame Intra-chr p12.1 p12.1 29722 ChimerSeq STARFusion TCGA_RNA-Seq DENND1A-PRRX2 DENND1A chr9 126345448 - PRRX2 chr9 132481510 + Exonic hg19 HNSC TCGA-CV-7438 7 17 Out-of-frame Intra-chr q33.3 q34.11 Transcription factor Seq+ 29723 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-MT2A IGH@ chr14 106109703 - MT2A chr16 56642501 + Exonic hg19 HNSC TCGA-CV-7438 4 6 Out-of-frame Inter-chr 32.33 q13 Tumor suppressor gene 29724 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-MT2A IGH@ chr14 106207967 - MT2A chr16 56642507 + Exonic hg19 HNSC TCGA-CV-7438 3 4 Out-of-frame Inter-chr 32.33 q13 Tumor suppressor gene 29725 ChimerSeq STARFusion TCGA_RNA-Seq CDKN2A-MTAP CDKN2A chr9 21974677 - MTAP chr9 21815432 + Exonic hg19 HNSC TCGA-CQ-7063 19 59 In-Frame Intra-chr p21.3 Oncogene Tumor suppressor gene p21.3 Tumor suppressor gene Seq+ 29726 ChimerSeq STARFusion TCGA_RNA-Seq CDKN2A-MTAP CDKN2A chr9 21994820 - MTAP chr9 21815432 + Exonic hg19 HNSC TCGA-CQ-7063 2 44 5'UTR-CDS Intra-chr p21.3 Oncogene Tumor suppressor gene p21.3 Tumor suppressor gene Seq+ 29727 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57733388 + VMP1 chr17 57915656 + Exonic hg19 HNSC TCGA-CQ-7063 4 12 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 29728 ChimerSeq STARFusion TCGA_RNA-Seq NEDD4L-UBE2G1 NEDD4L chr18 55833093 + UBE2G1 chr17 4210418 - Exonic hg19 HNSC TCGA-CV-7435 8 66 Out-of-frame Inter-chr q21.31 Tumor suppressor gene p13.2 Seq+ 29729 ChimerSeq STARFusion TCGA_RNA-Seq PLOD1-IGH@ PLOD1 chr1 11994825 + IGH@ chr14 106330070 - Exonic hg19 HNSC TCGA-CV-7435 16 1 Out-of-frame Inter-chr p36.22 32.33 29730 ChimerSeq STARFusion TCGA_RNA-Seq PLOD1-IGH@ PLOD1 chr1 11994837 + IGH@ chr14 106330459 - Exonic hg19 HNSC TCGA-CV-7435 9 1 Out-of-frame Inter-chr p36.22 32.33 29731 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-HNRNPF IGH@ chr14 106791007 - HNRNPF chr10 43882227 - Exonic hg19 HNSC TCGA-CV-7435 7 1 Out-of-frame Inter-chr 32.33 q11.21 29732 ChimerSeq STARFusion TCGA_RNA-Seq PLOD1-IGH@ PLOD1 chr1 11994823 + IGH@ chr14 106330473 - Exonic hg19 HNSC TCGA-CV-7435 7 1 Out-of-frame Inter-chr p36.22 32.33 29733 ChimerSeq STARFusion TCGA_RNA-Seq TGM3-KRT4 TGM3 chr20 2298114 + KRT4 chr12 53200996 - Exonic hg19 HNSC TCGA-CV-7437 3 37 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 29734 ChimerSeq STARFusion TCGA_RNA-Seq ELP3-MYO5C ELP3 chr8 28016150 + MYO5C chr15 52500840 - Exonic hg19 HNSC TCGA-CV-7430 9 33 In-Frame Inter-chr p21.1 q21.2 Seq+ 29735 ChimerSeq STARFusion TCGA_RNA-Seq IRAK2-SRGAP3 IRAK2 chr3 10206732 + SRGAP3 chr3 9166601 - Exonic hg19 HNSC TCGA-CV-7430 8 36 In-Frame Intra-chr p25.3 TKL:IRAK p25.3 Tumor suppressor gene Seq+ 29736 ChimerSeq STARFusion TCGA_RNA-Seq NCEH1-SPATA16 NCEH1 chr3 172428637 - SPATA16 chr3 172674614 - Exonic hg19 HNSC TCGA-CV-7430 6 21 In-Frame Intra-chr q26.31 q26.31 Seq+ 29737 ChimerSeq STARFusion TCGA_RNA-Seq PTMS-KRT6A PTMS chr12 6879875 + KRT6A chr12 52886984 - Exonic hg19 HNSC TCGA-CV-7430 3 13 Out-of-frame Intra-chr p13.31 q13.13 29738 ChimerSeq STARFusion TCGA_RNA-Seq TBCD-LTF TBCD chr17 80844035 + LTF chr3 46488890 - Exonic hg19 HNSC TCGA-CV-7432 68 1 Out-of-frame Inter-chr p21.31 Oncogene Tumor suppressor gene Transcription factor 29739 ChimerSeq STARFusion TCGA_RNA-Seq HTN1-STATH HTN1 chr4 70916212 + STATH chr4 70864142 + Exonic hg19 HNSC TCGA-CV-7432 4 152 5'UTR-5'UTR Intra-chr 29740 ChimerSeq STARFusion TCGA_RNA-Seq HTN1-STATH HTN1 chr4 70918844 + STATH chr4 70865384 + Exonic hg19 HNSC TCGA-CV-7432 4 123 In-Frame Intra-chr 29741 ChimerSeq STARFusion TCGA_RNA-Seq MUC7-STATH MUC7 chr4 71347491 + STATH chr4 70866622 + Exonic hg19 HNSC TCGA-CV-7432 3 97 Out-of-frame Intra-chr q13.3 29742 ChimerSeq STARFusion TCGA_RNA-Seq SMR3B-COX4I1 SMR3B chr4 71255602 + COX4I1 chr16 85837493 + Exonic hg19 HNSC TCGA-CV-7432 12 3 Out-of-frame Inter-chr q13.3 q24.1 29743 ChimerSeq STARFusion TCGA_RNA-Seq SMR3B-FDCSP SMR3B chr4 71250281 + FDCSP chr4 71096912 + Exonic hg19 HNSC TCGA-CV-7432 2 14 CDS-5'UTR Intra-chr q13.3 q13.3 29744 ChimerSeq STARFusion TCGA_RNA-Seq MUC7-RPL9P7 MUC7 chr4 71346861 + RPL9P7 chrX 23855054 - Exonic hg19 HNSC TCGA-CV-7432 3 6 Out-of-frame Inter-chr q13.3 p22.11 29745 ChimerSeq STARFusion TCGA_RNA-Seq SERTAD2-TGFA SERTAD2 chr2 64977415 - TGFA chr2 70692865 - Exonic hg19 HNSC TCGA-CQ-7069 27 99 5'UTR-CDS Intra-chr p14 p13.3 Seq+ 29746 ChimerSeq STARFusion TCGA_RNA-Seq SERTAD2-TGFA SERTAD2 chr2 64977415 - TGFA chr2 70692868 - Exonic hg19 HNSC TCGA-CQ-7069 10 98 5'UTR-CDS Intra-chr p14 p13.3 Seq+ 29747 ChimerSeq STARFusion TCGA_RNA-Seq CCDC88C-RASGEF1B CCDC88C chr14 91772109 - RASGEF1B chr4 82836511 - Exonic hg19 HNSC TCGA-T2-A6X0 31 84 CDS-5'UTR Inter-chr q32.12 q21.22 Seq+ 29748 ChimerSeq STARFusion TCGA_RNA-Seq HCFC1-IGHG1 HCFC1 chrX 153222118 - IGHG1 chr14 106209407 - Exonic hg19 HNSC TCGA-T2-A6X0 11 0 Out-of-frame Inter-chr q28 q32.33 29749 ChimerSeq STARFusion TCGA_RNA-Seq BCL2L13-CUX2 BCL2L13 chr22 18138598 + CUX2 chr12 111772245 + Exonic hg19 HNSC TCGA-T2-A6X0 6 17 In-Frame Inter-chr q11.21 q24.11 Transcription factor Seq+ 29750 ChimerSeq STARFusion TCGA_RNA-Seq HCFC1-IGHG1 HCFC1 chrX 153222116 - IGHG1 chr14 106237740 - Exonic hg19 HNSC TCGA-T2-A6X0 9 0 Out-of-frame Inter-chr q28 q32.33 29751 ChimerSeq STARFusion TCGA_RNA-Seq DAPP1-COL4A3 DAPP1 chr4 100784229 + COL4A3 chr2 228176502 + Exonic hg19 HNSC TCGA-T2-A6X0 4 7 Out-of-frame Inter-chr q23 q36.3 Seq+ 29752 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-HMHA1 SBNO2 chr19 1116020 - HMHA1 chr19 1080463 + Exonic hg19 HNSC TCGA-UF-A7JC 22 199 In-Frame Intra-chr p13.3 Seq+ 29753 ChimerSeq STARFusion TCGA_RNA-Seq WWC2-CCDC110 WWC2 chr4 184020775 + CCDC110 chr4 186392203 - Exonic hg19 HNSC TCGA-H7-A6C4 2 7 Out-of-frame Intra-chr q35.1 q35.1 Seq+ 29754 ChimerSeq STARFusion TCGA_RNA-Seq RPL10-KRT17 RPL10 chrX 153627891 + KRT17 chr17 39777899 - Exonic hg19 HNSC TCGA-D6-A6ES 3 5 Out-of-frame Inter-chr q28 Tumor suppressor gene q21.2 29755 ChimerSeq STARFusion TCGA_RNA-Seq RPL10A-S100A8 RPL10A chr6 35438511 + S100A8 chr1 153363022 - Exonic hg19 HNSC TCGA-D6-A6ES 3 4 Out-of-frame Inter-chr p21.31 q21.3 29756 ChimerSeq STARFusion TCGA_RNA-Seq UNC13B-UBE2R2 UNC13B chr9 35231216 + UBE2R2 chr9 33886879 + Exonic hg19 HNSC TCGA-MT-A51X 7 31 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 29757 ChimerSeq STARFusion TCGA_RNA-Seq ZFPM2-ANXA13 ZFPM2 chr8 106646585 + ANXA13 chr8 124693599 - Exonic hg19 HNSC TCGA-MZ-A5BI 28 69 Out-of-frame Intra-chr q22.3 Transcription factor q24.13 Seq+ 29758 ChimerSeq STARFusion TCGA_RNA-Seq SMAD4-IGHG1 SMAD4 chr18 48556642 + IGHG1 chr14 106209409 - Exonic hg19 HNSC TCGA-MZ-A5BI 25 1 Out-of-frame Inter-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q32.33 29759 ChimerSeq STARFusion TCGA_RNA-Seq SMAD4-IGHG1 SMAD4 chr18 48556642 + IGHG1 chr14 106237744 - Exonic hg19 HNSC TCGA-MZ-A5BI 20 1 Out-of-frame Inter-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q32.33 29760 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L3-TPST1 NFE2L3 chr7 26223404 + TPST1 chr7 65817492 + Exonic hg19 HNSC TCGA-MZ-A5BI 6 33 In-Frame Intra-chr p15.2 Transcription factor q11.21 Seq+ 29761 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-FBN3 IGH@ chr14 106134592 - FBN3 chr19 8138054 - Exonic hg19 HNSC TCGA-MZ-A5BI 9 3 Out-of-frame Inter-chr 32.33 p13.2 29762 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-FBN3 IGHG1 chr14 106134592 - FBN3 chr19 8138054 - Exonic hg19 HNSC TCGA-MZ-A5BI 9 2 Out-of-frame Inter-chr q32.33 p13.2 29763 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB2-IGKC DNAJB2 chr2 220151425 + IGKC chr2 89156807 - Exonic hg19 HNSC TCGA-MZ-A5BI 8 1 Out-of-frame Intra-chr q35 p11.2 29764 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SCARB1 IGH@ chr14 107095400 - SCARB1 chr12 125262325 - Exonic hg19 HNSC TCGA-MZ-A5BI 6 1 Out-of-frame Inter-chr 32.33 q24.31 29765 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106237745 - Exonic hg19 HNSC TCGA-MZ-A5BI 6 1 Out-of-frame Inter-chr q24.2 32.33 29766 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHG1 SLC7A5 chr16 87868137 - IGHG1 chr14 106209410 - Exonic hg19 HNSC TCGA-MZ-A5BI 6 1 Out-of-frame Inter-chr q24.2 q32.33 29767 ChimerSeq STARFusion TCGA_RNA-Seq UBR5-TRAF3 UBR5 chr8 103269860 - TRAF3 chr14 103352526 + Exonic hg19 HNSC TCGA-MZ-A5BI 3 5 In-Frame Inter-chr q22.3 Oncogene q32.32 Seq+ 29768 ChimerSeq STARFusion TCGA_RNA-Seq KRT14-S100A9 KRT14 chr17 39739907 - S100A9 chr1 153333272 + Exonic hg19 HNSC TCGA-MT-A51W 3 74 Out-of-frame Inter-chr q21.2 q21.3 29769 ChimerSeq STARFusion TCGA_RNA-Seq IPPK-VTI1B IPPK chr9 95418738 - VTI1B chr14 68118198 - Exonic hg19 HNSC TCGA-CV-7446 3 30 Out-of-frame Inter-chr q22.31 q24.1 Seq+ 29770 ChimerSeq STARFusion TCGA_RNA-Seq ECT2-FNDC3B ECT2 chr3 172480596 + FNDC3B chr3 171904502 + Exonic hg19 HNSC TCGA-CV-7446 2 25 Out-of-frame Intra-chr q26.31 Tumor suppressor gene q26.31 29771 ChimerSeq STARFusion TCGA_RNA-Seq ARG2-IPPK ARG2 chr14 68118063 + IPPK chr9 95414921 - Exonic hg19 HNSC TCGA-CV-7446 4 12 5'UTR-CDS Inter-chr q24.1 q22.31 Seq+ 29772 ChimerSeq STARFusion TCGA_RNA-Seq KRT6A-FN1 KRT6A chr12 52841174 - FN1 chr2 216241248 - Exonic hg19 HNSC TCGA-CV-7446 3 6 Out-of-frame Inter-chr q13.13 q35 Oncogene 29773 ChimerSeq STARFusion TCGA_RNA-Seq TMEM11-UBAP1 TMEM11 chr17 21117404 - UBAP1 chr9 34220906 + Exonic hg19 HNSC TCGA-DQ-5629 8 26 Out-of-frame Inter-chr p11.2 p13.3 Seq+ 29774 ChimerSeq STARFusion TCGA_RNA-Seq TMEM11-UBAP1 TMEM11 chr17 21117404 - UBAP1 chr9 34199824 + Exonic hg19 HNSC TCGA-DQ-5629 3 25 CDS-5'UTR Inter-chr p11.2 p13.3 Seq+ 29775 ChimerSeq STARFusion TCGA_RNA-Seq XPO1-CCT4 XPO1 chr2 61760907 - CCT4 chr2 62106146 - Exonic hg19 HNSC TCGA-DQ-5629 5 9 Out-of-frame Intra-chr p15 Oncogene p15 29776 ChimerSeq STARFusion TCGA_RNA-Seq RNF217-TPD52L1 RNF217 chr6 125398004 + TPD52L1 chr6 125541224 + Exonic hg19 HNSC TCGA-DQ-5625 6 13 In-Frame Intra-chr q22.31 q22.31 29777 ChimerSeq STARFusion TCGA_RNA-Seq ERP44-CHRDL2 ERP44 chr9 102814699 - CHRDL2 chr11 74429877 - Exonic hg19 HNSC TCGA-DQ-5624 53 246 In-Frame Inter-chr q31.1 q13.4 Seq+ 29778 ChimerSeq STARFusion TCGA_RNA-Seq SLC2A11-LLPH SLC2A11 chr22 24217428 + LLPH chr12 66517798 - Exonic hg19 HNSC TCGA-DQ-5624 42 139 In-Frame Inter-chr q11.23 q14.3 Seq+ 29779 ChimerSeq STARFusion TCGA_RNA-Seq SLC2A11-TMBIM4 SLC2A11 chr22 24217428 + TMBIM4 chr12 66517798 - Exonic hg19 HNSC TCGA-DQ-5624 42 119 CDS-3'UTR Inter-chr q11.23 q14.3 29780 ChimerSeq STARFusion TCGA_RNA-Seq SLC2A11-TMBIM4 SLC2A11 chr22 24217428 + TMBIM4 chr12 66517798 - Exonic hg19 HNSC TCGA-DQ-5624 23 71 CDS-3'UTR Inter-chr q11.23 q14.3 29781 ChimerSeq STARFusion TCGA_RNA-Seq ALG10B-IGFBP6 ALG10B chr12 38712260 + IGFBP6 chr12 53495829 + Exonic hg19 HNSC TCGA-DQ-5624 16 60 In-Frame Intra-chr q12 q13.13 Seq+ 29782 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106209410 - Exonic hg19 HNSC TCGA-DQ-5624 16 5 Out-of-frame Inter-chr q24.2 32.33 29783 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHG1 SLC7A5 chr16 87868137 - IGHG1 chr14 106209410 - Exonic hg19 HNSC TCGA-DQ-5624 16 4 Out-of-frame Inter-chr q24.2 q32.33 29784 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106237745 - Exonic hg19 HNSC TCGA-DQ-5624 14 5 Out-of-frame Inter-chr q24.2 32.33 29785 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106136184 - Exonic hg19 HNSC TCGA-DQ-5624 13 4 Out-of-frame Inter-chr q24.2 32.33 29786 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHG1 SLC7A5 chr16 87868137 - IGHG1 chr14 106237745 - Exonic hg19 HNSC TCGA-DQ-5624 13 4 Out-of-frame Inter-chr q24.2 q32.33 29787 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106092405 - Exonic hg19 HNSC TCGA-DQ-5624 10 5 Out-of-frame Inter-chr q24.2 32.33 29788 ChimerSeq STARFusion TCGA_RNA-Seq KRT17-HSPB1 KRT17 chr17 39780636 - HSPB1 chr7 75933401 + Exonic hg19 HNSC TCGA-DQ-5624 3 7 Out-of-frame Inter-chr q21.2 q11.23 29789 ChimerSeq STARFusion TCGA_RNA-Seq TTC19-PIGL TTC19 chr17 15909882 + PIGL chr17 16203202 + Exonic hg19 HNSC TCGA-IQ-A6SG 6 20 Out-of-frame Intra-chr p12 p11.2 29790 ChimerSeq STARFusion TCGA_RNA-Seq MED15-KLHL22 MED15 chr22 20862033 + KLHL22 chr22 20843531 - Exonic hg19 HNSC TCGA-BB-8601 8 60 CDS-5'UTR Intra-chr q11.21 q11.21 Seq+ 29791 ChimerSeq STARFusion TCGA_RNA-Seq MED15-KLHL22 MED15 chr22 20862033 + KLHL22 chr22 20843499 - Exonic hg19 HNSC TCGA-BB-8601 2 60 CDS-5'UTR Intra-chr q11.21 q11.21 Seq+ 29792 ChimerSeq STARFusion TCGA_RNA-Seq PLSCR1-MACROD2 PLSCR1 chr3 146166993 - MACROD2 chr20 16021846 + Exonic hg19 HNSC TCGA-QK-A6V9 6 18 3'UTR-CDS Inter-chr q24 Transcription factor p12.1 Seq+ 29793 ChimerSeq STARFusion TCGA_RNA-Seq PLSCR1-MACROD2 PLSCR1 chr3 146234793 - MACROD2 chr20 16021846 + Exonic hg19 HNSC TCGA-QK-A6V9 3 18 Out-of-frame Inter-chr q24 Transcription factor p12.1 Seq+ 29794 ChimerSeq STARFusion TCGA_RNA-Seq LAMB3-NAB1 LAMB3 chr1 209795881 - NAB1 chr2 191537827 + Exonic hg19 HNSC TCGA-D6-6825 16 20 Out-of-frame Inter-chr q32.2 q32.2 Seq+ 29795 ChimerSeq STARFusion TCGA_RNA-Seq USP16-CNBD2 USP16 chr21 30403094 + CNBD2 chr20 34560551 + Exonic hg19 HNSC TCGA-D6-6825 4 27 Out-of-frame Inter-chr q21.3 q11.23 Seq+ 29796 ChimerSeq STARFusion TCGA_RNA-Seq TMEM45B-OPCML TMEM45B chr11 129724711 + OPCML chr11 132307253 - Exonic hg19 HNSC TCGA-CV-6961 2 26 In-Frame Intra-chr q24.3 q25 Tumor suppressor gene 29797 ChimerSeq STARFusion TCGA_RNA-Seq THBS1-AGBL1 THBS1 chr15 39881555 + AGBL1 chr15 86790902 + Exonic hg19 HNSC TCGA-CV-6960 1055 4326 Out-of-frame Intra-chr q14 Oncogene Tumor suppressor gene q25.3 Seq+ 29798 ChimerSeq STARFusion TCGA_RNA-Seq SCAP-SMARCC1 SCAP chr3 47517289 - SMARCC1 chr3 47712207 - Exonic hg19 HNSC TCGA-CV-6962 20 19 5'UTR-CDS Intra-chr p21.31 p21.31 Tumor suppressor gene Seq+ 29799 ChimerSeq STARFusion TCGA_RNA-Seq SNX14-SYNCRIP SNX14 chr6 86298581 - SYNCRIP chr6 86325065 - Exonic hg19 HNSC TCGA-CV-6962 2 46 Out-of-frame Intra-chr q14.3 q14.3 Seq+ 29800 ChimerSeq STARFusion TCGA_RNA-Seq SNX14-SYNCRIP SNX14 chr6 86303297 - SYNCRIP chr6 86325065 - Exonic hg19 HNSC TCGA-CV-6962 2 46 In-Frame Intra-chr q14.3 q14.3 Seq+ 29801 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP1-ATG13 ARHGAP1 chr11 46722101 - ATG13 chr11 46677783 + Exonic hg19 HNSC TCGA-CV-6962 8 11 5'UTR-CDS Intra-chr p11.2 p11.2 29802 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-TRIM40 C6orf48 chr6 31805212 + TRIM40 chr6 30104189 + Exonic hg19 HNSC TCGA-CV-6962 3 5 CDS-5'UTR Intra-chr Seq+ 29803 ChimerSeq STARFusion TCGA_RNA-Seq SF1-HRASLS2 SF1 chr11 64534372 - HRASLS2 chr11 63326132 - Exonic hg19 HNSC TCGA-BB-8596 26 164 In-Frame Intra-chr q13.1 q12.3 Tumor suppressor gene Seq+ 29804 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983374 - RSRC2 chr12 122990253 - Exonic hg19 HNSC TCGA-CN-6988 81 395 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 29805 ChimerSeq STARFusion TCGA_RNA-Seq OSGIN2-RIPK2 OSGIN2 chr8 90926974 + RIPK2 chr8 90798821 + Exonic hg19 HNSC TCGA-CV-5430 27 61 In-Frame Intra-chr q21.3 q21.3 TKL:RIPK Seq+ 29806 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-TOP2B IGH@ chr14 107083457 - TOP2B chr3 25651117 - Exonic hg19 HNSC TCGA-CV-5431 232 1 Out-of-frame Inter-chr 32.33 p24.2 29807 ChimerSeq STARFusion TCGA_RNA-Seq CLCC1-IGKC CLCC1 chr1 109472744 - IGKC chr2 89161429 - Exonic hg19 HNSC TCGA-CV-5431 163 2 Out-of-frame Inter-chr p13.3 p11.2 29808 ChimerSeq STARFusion TCGA_RNA-Seq CTHRC1-IGH@ CTHRC1 chr8 104383857 + IGH@ chr14 106136174 - Exonic hg19 HNSC TCGA-CV-5431 75 3 Out-of-frame Inter-chr q22.3 32.33 29809 ChimerSeq STARFusion TCGA_RNA-Seq CTHRC1-IGHG1 CTHRC1 chr8 104383857 + IGHG1 chr14 106209400 - Exonic hg19 HNSC TCGA-CV-5431 75 2 Out-of-frame Inter-chr q22.3 q32.33 29810 ChimerSeq STARFusion TCGA_RNA-Seq TNKS1BP1-IGH@ TNKS1BP1 chr11 57067183 - IGH@ chr14 106209409 - Exonic hg19 HNSC TCGA-CV-5431 64 8 Out-of-frame Inter-chr q12.1 32.33 29811 ChimerSeq STARFusion TCGA_RNA-Seq TNKS1BP1-IGHG1 TNKS1BP1 chr11 57067183 - IGHG1 chr14 106209409 - Exonic hg19 HNSC TCGA-CV-5431 64 4 Out-of-frame Inter-chr q12.1 q32.33 29812 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-UNC45B FBXL20 chr17 37557614 - UNC45B chr17 33498341 + Exonic hg19 HNSC TCGA-CV-5431 33 116 In-Frame Intra-chr q12 q12 Seq+ 29813 ChimerSeq STARFusion TCGA_RNA-Seq TNKS1BP1-IGH@ TNKS1BP1 chr11 57067183 - IGH@ chr14 106136183 - Exonic hg19 HNSC TCGA-CV-5431 58 8 Out-of-frame Inter-chr q12.1 32.33 29814 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-UNC45B FBXL20 chr17 37558426 - UNC45B chr17 33498341 + Exonic hg19 HNSC TCGA-CV-5431 25 112 5'UTR-CDS Intra-chr q12 q12 Seq+ 29815 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-PFN1 IGL@ chr22 23223571 + PFN1 chr17 4852252 - Exonic hg19 HNSC TCGA-CV-5431 45 2 Out-of-frame Inter-chr q11.22 p13.2 Tumor suppressor gene 29816 ChimerSeq STARFusion TCGA_RNA-Seq CLCC1-IGKC CLCC1 chr1 109472744 - IGKC chr2 89160429 - Exonic hg19 HNSC TCGA-CV-5431 24 2 Out-of-frame Inter-chr p13.3 p11.2 29817 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-NOTCH1 IGHG1 chr14 106134591 - NOTCH1 chr9 139403429 - Exonic hg19 HNSC TCGA-CV-5431 23 2 Out-of-frame Inter-chr q32.33 q34.3 Oncogene Tumor suppressor gene 29818 ChimerSeq STARFusion TCGA_RNA-Seq TNKS1BP1-IGHG1 TNKS1BP1 chr11 57067179 - IGHG1 chr14 106237740 - Exonic hg19 HNSC TCGA-CV-5431 20 4 Out-of-frame Inter-chr q12.1 q32.33 29819 ChimerSeq STARFusion TCGA_RNA-Seq TNKS1BP1-IGHG1 TNKS1BP1 chr11 57067185 - IGHG1 chr14 106237746 - Exonic hg19 HNSC TCGA-CV-5431 17 4 Out-of-frame Inter-chr q12.1 q32.33 29820 ChimerSeq STARFusion TCGA_RNA-Seq RUNX2-IGL@ RUNX2 chr6 45399613 + IGL@ chr22 23241802 + Exonic hg19 HNSC TCGA-CV-5431 10 1 Out-of-frame Inter-chr p21.1 Tumor suppressor gene Transcription factor q11.22 29821 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGHG1 TET3 chr2 74329257 + IGHG1 chr14 106209409 - Exonic hg19 HNSC TCGA-CV-5431 9 1 Out-of-frame Inter-chr p13.1 Transcription factor q32.33 29822 ChimerSeq STARFusion TCGA_RNA-Seq KDM5D-IGHG3 KDM5D chrY 21903328 - IGHG3 chr14 106330469 - Exonic hg19 HNSC TCGA-CV-5431 8 1 Out-of-frame Inter-chr q11.223 29823 ChimerSeq STARFusion TCGA_RNA-Seq ALDH18A1-IGKC ALDH18A1 chr10 97366177 - IGKC chr2 89161074 - Exonic hg19 HNSC TCGA-CV-5431 7 3 Out-of-frame Inter-chr q24.1 p11.2 29824 ChimerSeq STARFusion TCGA_RNA-Seq ACTL6A-IGL@ ACTL6A chr3 179280884 + IGL@ chr22 23241798 + Exonic hg19 HNSC TCGA-CV-5431 6 2 Out-of-frame Inter-chr q26.33 q11.22 29825 ChimerSeq STARFusion TCGA_RNA-Seq LTB4R-IGHG1 LTB4R chr14 24785787 + IGHG1 chr14 106209257 - Exonic hg19 HNSC TCGA-CV-5431 6 2 Out-of-frame Intra-chr q12 q32.33 29826 ChimerSeq STARFusion TCGA_RNA-Seq ACTL6A-IGLC2 ACTL6A chr3 179280884 + IGLC2 chr22 23241798 + Exonic hg19 HNSC TCGA-CV-5431 6 1 Out-of-frame Inter-chr q26.33 q11.22 29827 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242532 + KRT14 chr17 39768618 - Exonic hg19 HNSC TCGA-CV-5431 3 4 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29828 ChimerSeq STARFusion TCGA_RNA-Seq SLX4IP-SLC24A3 SLX4IP chr20 10438879 + SLC24A3 chr20 19261603 + Exonic hg19 HNSC TCGA-CV-5436 2 12 Out-of-frame Intra-chr p12.2 p11.23 Seq+ 29829 ChimerSeq STARFusion TCGA_RNA-Seq PTPRZ1-TSPAN33 PTPRZ1 chr7 121695141 + TSPAN33 chr7 128801520 + Exonic hg19 HNSC TCGA-CV-5434 15 83 In-Frame Intra-chr q31.32 q32.1 Seq+ 29830 ChimerSeq STARFusion TCGA_RNA-Seq ROCK1-DCC ROCK1 chr18 18586312 - DCC chr18 50912413 + Exonic hg19 HNSC TCGA-CV-5434 10 44 In-Frame Intra-chr q11.1 AGC:DMPK q21.2 Oncogene Tumor suppressor gene Seq+ 29831 ChimerSeq STARFusion TCGA_RNA-Seq TRMT11-HINT3 TRMT11 chr6 126307768 + HINT3 chr6 126288033 + Exonic hg19 HNSC TCGA-CV-5434 3 11 In-Frame Intra-chr q22.32 q22.32 Seq+ 29832 ChimerSeq STARFusion TCGA_RNA-Seq NLK-RAD51D NLK chr17 26370357 + RAD51D chr17 33433500 - Exonic hg19 HNSC TCGA-CV-5434 3 10 Out-of-frame Intra-chr q11.2 CMGC:MAPK q12 Seq+ 29833 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK2-SRGAP2 MAPKAPK2 chr1 206858853 + SRGAP2 chr1 206589249 + Exonic hg19 HNSC TCGA-CV-5435 8 97 In-Frame Intra-chr q32.1 CAMK:MAPKAPK q32.1 Tumor suppressor gene Seq+ 29834 ChimerSeq STARFusion TCGA_RNA-Seq CCAT1-CASC8 CCAT1 chr8 128231055 - CASC8 chr8 128433208 - Exonic hg19 HNSC TCGA-CV-5435 3 30 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 29835 ChimerSeq STARFusion TCGA_RNA-Seq FAT1-KIAA1430 FAT1 chr4 187554838 - KIAA1430 chr4 186085333 - Exonic hg19 HNSC TCGA-DQ-7588 175 652 In-Frame Intra-chr q35.2 Tumor suppressor gene Seq+ 29836 ChimerSeq STARFusion TCGA_RNA-Seq MED24-PPP1R1B MED24 chr17 38182409 - PPP1R1B chr17 37791860 + Exonic hg19 HNSC TCGA-DQ-7589 15 162 Out-of-frame Intra-chr q21.1 q12 Tumor suppressor gene Seq+ 29837 ChimerSeq STARFusion TCGA_RNA-Seq ORAOV1-CCND1 ORAOV1 chr11 69489958 - CCND1 chr11 69457799 + Exonic hg19 HNSC TCGA-DQ-7589 11 55 Out-of-frame Intra-chr q13.3 q13.3 Oncogene Seq+ 29838 ChimerSeq STARFusion TCGA_RNA-Seq HAUS6-PMPCA HAUS6 chr9 19094315 - PMPCA chr9 139306942 + Exonic hg19 HNSC TCGA-DQ-7589 7 9 Out-of-frame Intra-chr p22.1 q34.3 Seq+ 29839 ChimerSeq STARFusion TCGA_RNA-Seq CDK14-ORC5 CDK14 chr7 90233563 + ORC5 chr7 103849900 - Exonic hg19 HNSC TCGA-DQ-7589 3 16 Out-of-frame Intra-chr q21.13 q22.2 Seq+ 29840 ChimerSeq STARFusion TCGA_RNA-Seq CCND1-FGF4 CCND1 chr11 69458759 + FGF4 chr11 69588895 - Exonic hg19 HNSC TCGA-DQ-7589 4 11 In-Frame Intra-chr q13.3 Oncogene q13.3 Seq+ 29841 ChimerSeq STARFusion TCGA_RNA-Seq SNX30-CNTLN SNX30 chr9 115513437 + CNTLN chr9 17484293 + Exonic hg19 HNSC TCGA-DQ-7589 3 12 In-Frame Intra-chr q32 p22.2 Seq+ 29842 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC21-ELAVL2 ZDHHC21 chr9 14690335 - ELAVL2 chr9 23731123 - Exonic hg19 HNSC TCGA-DQ-7589 2 16 5'UTR-CDS Intra-chr p22.3 p21.3 Seq+ 29843 ChimerSeq STARFusion TCGA_RNA-Seq CDK14-ORC5 CDK14 chr7 90233563 + ORC5 chr7 103844682 - Exonic hg19 HNSC TCGA-DQ-7589 2 15 5'UTR-CDS Intra-chr q21.13 q22.2 Seq+ 29844 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-TLK2 BCAS3 chr17 59161925 + TLK2 chr17 60673946 + Exonic hg19 HNSC TCGA-DQ-7589 3 7 Out-of-frame Intra-chr q23.2 q23.2 Other:TLK Seq+ 29845 ChimerSeq STARFusion TCGA_RNA-Seq DDB1-STX3 DDB1 chr11 61091451 - STX3 chr11 59540684 + Exonic hg19 HNSC TCGA-QK-A6VB 25 79 In-Frame Intra-chr q12.2 q12.1 Seq+ 29846 ChimerSeq STARFusion TCGA_RNA-Seq KRT14-ANKRD52 KRT14 chr17 39743047 - ANKRD52 chr12 56633589 - Exonic hg19 HNSC TCGA-QK-A6VB 8 1 Out-of-frame Inter-chr q21.2 q13.3 29847 ChimerSeq STARFusion TCGA_RNA-Seq COBLL1-SLC38A11 COBLL1 chr2 165697666 - SLC38A11 chr2 165796066 - Exonic hg19 HNSC TCGA-QK-A6VB 5 11 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 29848 ChimerSeq STARFusion TCGA_RNA-Seq MBNL2-S100A9 MBNL2 chr13 97999323 + S100A9 chr1 153333345 + Exonic hg19 HNSC TCGA-QK-A6VC 175 0 Out-of-frame Inter-chr q32.1 Transcription factor q21.3 29849 ChimerSeq STARFusion TCGA_RNA-Seq PBRM1-GLT8D1 PBRM1 chr3 52712516 - GLT8D1 chr3 52734512 - Exonic hg19 HNSC TCGA-QK-A6VC 10 16 CDS-5'UTR Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 Seq+ 29850 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-WDR70 NIPBL chr5 37061120 + WDR70 chr5 37438024 + Exonic hg19 HNSC TCGA-QK-A6VC 4 12 In-Frame Intra-chr p13.2 p13.2 Seq+ 29851 ChimerSeq STARFusion TCGA_RNA-Seq RAVER1-ICAM3 RAVER1 chr19 10443965 - ICAM3 chr19 10449624 - Exonic hg19 HNSC TCGA-QK-A6VC 2 10 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 29852 ChimerSeq STARFusion TCGA_RNA-Seq POLH-EZR POLH chr6 43583262 + EZR chr6 159187476 - Exonic hg19 HNSC TCGA-BB-7871 6 14 Out-of-frame Intra-chr p21.1 q25.3 Seq+ 29853 ChimerSeq STARFusion TCGA_RNA-Seq CCAT1-CASC8 CCAT1 chr8 128231055 - CASC8 chr8 128335399 - Exonic hg19 HNSC TCGA-BB-7871 2 15 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 29854 ChimerSeq STARFusion TCGA_RNA-Seq RBBP8-TAF4B RBBP8 chr18 20516923 + TAF4B chr18 23845134 + Exonic hg19 HNSC TCGA-BB-7872 7 32 In-Frame Intra-chr q11.2 Tumor suppressor gene q11.2 Seq+ 29855 ChimerSeq STARFusion TCGA_RNA-Seq TP53TG1-ABCB1 TP53TG1 chr7 86970839 - ABCB1 chr7 87183248 - Exonic hg19 HNSC TCGA-BB-7872 6 21 3'UTR-CDS Intra-chr q21.12 q21.12 Seq+ 29856 ChimerSeq STARFusion TCGA_RNA-Seq NCKAP5-LINC00342 NCKAP5 chr2 133483200 - LINC00342 chr2 96479893 - Exonic hg19 HNSC TCGA-P3-A6T7 8 12 Out-of-frame Intra-chr q21.2 q11.1 29857 ChimerSeq STARFusion TCGA_RNA-Seq KRT17-S100A9 KRT17 chr17 39739907 - S100A9 chr1 153333272 + Exonic hg19 HNSC TCGA-P3-A6T7 3 13 Out-of-frame Inter-chr q21.2 q21.3 29858 ChimerSeq STARFusion TCGA_RNA-Seq CRYBG3-MYBPC1 CRYBG3 chr3 97619329 + MYBPC1 chr12 102008274 + Exonic hg19 HNSC TCGA-P3-A6T7 4 4 Out-of-frame Inter-chr q11.2 q23.2 Seq+ 29859 ChimerSeq STARFusion TCGA_RNA-Seq SLC2A12-SGK1 SLC2A12 chr6 134373516 - SGK1 chr6 134583286 - Exonic hg19 HNSC TCGA-BA-4078 21 61 Out-of-frame Intra-chr q23.2 q23.2 AGC:SGK Oncogene Seq+ 29860 ChimerSeq STARFusion TCGA_RNA-Seq PTK7-ANKS1A PTK7 chr6 43044305 + ANKS1A chr6 34935016 + Exonic hg19 HNSC TCGA-BA-4078 5 38 Out-of-frame Intra-chr p21.1 p21.31 Seq+ 29861 ChimerSeq STARFusion TCGA_RNA-Seq ATF6B-CMAHP ATF6B chr6 32084257 - CMAHP chr6 25115328 - Exonic hg19 HNSC TCGA-BA-4078 3 33 CDS-3'UTR Intra-chr Transcription factor p22.3 Seq+ 29862 ChimerSeq STARFusion TCGA_RNA-Seq MYO1B-STAT4 MYO1B chr2 192110352 + STAT4 chr2 192012930 - Exonic hg19 HNSC TCGA-BA-4075 56 72 5'UTR-5'UTR Intra-chr q32.3 q32.3 Transcription factor Seq+ 29863 ChimerSeq STARFusion TCGA_RNA-Seq MYO1B-STAT4 MYO1B chr2 192110352 + STAT4 chr2 192032451 - Exonic hg19 HNSC TCGA-BA-4075 7 70 5'UTR-5'UTR Intra-chr q32.3 q32.3 Transcription factor Seq+ 29864 ChimerSeq STARFusion TCGA_RNA-Seq LAMA3-TTC39C LAMA3 chr18 21529888 + TTC39C chr18 21644104 + Exonic hg19 HNSC TCGA-BA-4075 2 16 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 29865 ChimerSeq STARFusion TCGA_RNA-Seq LRBA-SH3D19 LRBA chr4 151935579 - SH3D19 chr4 152070713 - Exonic hg19 HNSC TCGA-BA-4074 10 24 In-Frame Intra-chr q31.3 q31.3 KB Seq+ 29866 ChimerSeq STARFusion TCGA_RNA-Seq WDR36-NREP WDR36 chr5 110428316 + NREP chr5 111071204 - Exonic hg19 HNSC TCGA-BA-4077 2 62 In-Frame Intra-chr q22.1 q22.1 Seq+ 29867 ChimerSeq STARFusion TCGA_RNA-Seq RIPK1-SERPINB9 RIPK1 chr6 3064293 + SERPINB9 chr6 2900855 - Exonic hg19 HNSC TCGA-BA-4077 11 0 5'UTR-5'UTR Intra-chr p25.2 TKL:RIPK p25.2 29868 ChimerSeq STARFusion TCGA_RNA-Seq IRF6-C1orf21 IRF6 chr1 209969693 - C1orf21 chr1 184588652 + Exonic hg19 HNSC TCGA-BA-4077 3 3 Out-of-frame Intra-chr q32.2 Transcription factor q25.3 Seq+ 29869 ChimerSeq STARFusion TCGA_RNA-Seq NREP-HMGN1P13 NREP chr5 111071127 - HMGN1P13 chr5 110908022 - Exonic hg19 HNSC TCGA-BA-4077 3 3 Out-of-frame Intra-chr q22.1 q22.1 29870 ChimerSeq STARFusion TCGA_RNA-Seq PHACTR2-PLAGL1 PHACTR2 chr6 143999346 + PLAGL1 chr6 144290115 - Exonic hg19 HNSC TCGA-BA-4076 3 30 CDS-5'UTR Intra-chr q24.2 q24.2 Tumor suppressor gene Transcription factor Seq+ 29871 ChimerSeq STARFusion TCGA_RNA-Seq HELZ-PSMD12 HELZ chr17 65147162 - PSMD12 chr17 65337168 - Exonic hg19 HNSC TCGA-CV-A6JE 18 86 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 29872 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-KRT16 ACTB chr7 5569207 - KRT16 chr17 39766486 - Exonic hg19 HNSC TCGA-CV-A6JE 23 2 Out-of-frame Inter-chr p22.1 q21.2 29873 ChimerSeq STARFusion TCGA_RNA-Seq FAR1-IGH@ FAR1 chr11 13690353 + IGH@ chr14 107283096 - Exonic hg19 HNSC TCGA-CV-A6JD 7 22 Out-of-frame Inter-chr p15.3 32.33 29874 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57739004 + VMP1 chr17 57915656 + Exonic hg19 HNSC TCGA-CV-A6JO 3 4 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 29875 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-FHIT CTTN chr11 70269101 + FHIT chr3 59999990 - Exonic hg19 HNSC TCGA-CV-A6JN 3 36 Out-of-frame Inter-chr q13.3 p14.2 Tumor suppressor gene Seq+ 29876 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-FHIT CTTN chr11 70269101 + FHIT chr3 59999801 - Exonic hg19 HNSC TCGA-CV-A6JN 2 36 Out-of-frame Inter-chr q13.3 p14.2 Tumor suppressor gene Seq+ 29877 ChimerSeq STARFusion TCGA_RNA-Seq OBSCN-KRT17 OBSCN chr1 228538602 + KRT17 chr17 39776810 - Exonic hg19 HNSC TCGA-CV-A6JM 8 1 In-Frame Inter-chr q42.13 q21.2 29878 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57754549 + VMP1 chr17 57886157 + Exonic hg19 HNSC TCGA-T2-A6WX 18 41 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 29879 ChimerSeq STARFusion TCGA_RNA-Seq CCAT1-CASC8 CCAT1 chr8 128231055 - CASC8 chr8 128433208 - Exonic hg19 HNSC TCGA-T2-A6WX 12 42 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 29880 ChimerSeq STARFusion TCGA_RNA-Seq IGSF3-C1orf137 IGSF3 chr1 117208906 - C1orf137 chr1 117237381 + Exonic hg19 HNSC TCGA-CV-A6JU 15 48 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 29881 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242532 + KRT14 chr17 39768618 - Exonic hg19 HNSC TCGA-CV-7099 4 13 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29882 ChimerSeq STARFusion TCGA_RNA-Seq MCTP1-TNC MCTP1 chr5 94259667 - TNC chr9 117783546 - Exonic hg19 HNSC TCGA-CV-7097 9 18 In-Frame Inter-chr q15 q33.1 Seq+ 29883 ChimerSeq STARFusion TCGA_RNA-Seq PTPRF-ST3GAL3 PTPRF chr1 44019612 + ST3GAL3 chr1 44360055 + Exonic hg19 HNSC TCGA-CV-7097 9 18 Out-of-frame Intra-chr p34.2 p34.1 Seq+ 29884 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242532 + KRT14 chr17 39768618 - Exonic hg19 HNSC TCGA-CV-7097 8 15 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29885 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242540 + KRT14 chr17 39768611 - Exonic hg19 HNSC TCGA-CV-7097 4 14 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29886 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242532 + KRT14 chr17 39742770 - Exonic hg19 HNSC TCGA-CV-7097 4 13 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29887 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242522 + KRT14 chr17 39742780 - Exonic hg19 HNSC TCGA-CV-7097 4 12 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29888 ChimerSeq STARFusion TCGA_RNA-Seq HELZ2-C20orf195 HELZ2 chr20 62203461 - C20orf195 chr20 62187007 + Exonic hg19 HNSC TCGA-CV-7097 3 9 Out-of-frame Intra-chr q13.33 29889 ChimerSeq STARFusion TCGA_RNA-Seq KRT6A-S100A8 KRT6A chr12 52881626 - S100A8 chr1 153363031 - Exonic hg19 HNSC TCGA-CV-A6JY 3 23 Out-of-frame Inter-chr q13.13 q21.3 29890 ChimerSeq STARFusion TCGA_RNA-Seq YWHAZ-KRT1 YWHAZ chr8 101932485 - KRT1 chr12 53069270 - Exonic hg19 HNSC TCGA-CV-A6JY 3 4 Out-of-frame Inter-chr q22.3 q13.13 29891 ChimerSeq STARFusion TCGA_RNA-Seq NAV2-USB1 NAV2 chr11 20142993 + USB1 chr16 58054472 + Exonic hg19 HNSC TCGA-CV-7095 8 0 Out-of-frame Inter-chr p15.1 q21 29892 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242540 + KRT14 chr17 39768611 - Exonic hg19 HNSC TCGA-CV-7095 5 11 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29893 ChimerSeq STARFusion TCGA_RNA-Seq RPL23-KRT5 RPL23 chr17 37008018 - KRT5 chr12 52913545 - Exonic hg19 HNSC TCGA-CV-7095 6 2 Out-of-frame Inter-chr q12 q13.13 29894 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242532 + KRT14 chr17 39768618 - Exonic hg19 HNSC TCGA-CV-7095 4 8 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29895 ChimerSeq STARFusion TCGA_RNA-Seq DHX15-RBPJ DHX15 chr4 24550478 - RBPJ chr4 26387975 + Exonic hg19 HNSC TCGA-CV-7090 6 23 Out-of-frame Intra-chr p15.2 p15.2 Transcription factor Seq+ 29896 ChimerSeq STARFusion TCGA_RNA-Seq NRP2-PARD3B NRP2 chr2 206548087 + PARD3B chr2 206418048 + Exonic hg19 HNSC TCGA-CV-7090 5 14 Out-of-frame Intra-chr q33.3 q33.3 Seq+ 29897 ChimerSeq STARFusion TCGA_RNA-Seq XPR1-TOR3A XPR1 chr1 180805852 + TOR3A chr1 179066963 + Exonic hg19 HNSC TCGA-CV-7091 26 105 CDS-3'UTR Intra-chr q25.3 q25.2 Seq+ 29898 ChimerSeq STARFusion TCGA_RNA-Seq RCBTB2-EPSTI1 RCBTB2 chr13 49084765 - EPSTI1 chr13 43500565 - Exonic hg19 HNSC TCGA-RS-A6TP 17 58 In-Frame Intra-chr q14.2 q14.11 Seq+ 29899 ChimerSeq STARFusion TCGA_RNA-Seq MAP2K4-PSMD12 MAP2K4 chr17 11924318 + PSMD12 chr17 65353694 - Exonic hg19 HNSC TCGA-RS-A6TP 8 15 Out-of-frame Intra-chr p12 STE:STE7 Oncogene Tumor suppressor gene q24.2 Seq+ 29900 ChimerSeq STARFusion TCGA_RNA-Seq KRT14-ANKRD52 KRT14 chr17 39743048 - ANKRD52 chr12 56633589 - Exonic hg19 HNSC TCGA-RS-A6TP 11 1 Out-of-frame Inter-chr q21.2 q13.3 29901 ChimerSeq STARFusion TCGA_RNA-Seq TRPC4AP-SOGA1 TRPC4AP chr20 33665849 - SOGA1 chr20 35433305 - Exonic hg19 HNSC TCGA-RS-A6TP 6 15 In-Frame Intra-chr q11.22 q11.23 Seq+ 29902 ChimerSeq STARFusion TCGA_RNA-Seq VCL-SEC24C VCL chr10 75802911 + SEC24C chr10 75526518 + Exonic hg19 HNSC TCGA-CR-7402 30 103 In-Frame Intra-chr q22.2 q22.2 Seq+ 29903 ChimerSeq STARFusion TCGA_RNA-Seq PAPPA-IGL@ PAPPA chr9 118916867 + IGL@ chr22 23247169 + Exonic hg19 HNSC TCGA-CR-7402 19 1 Out-of-frame Inter-chr q33.1 q11.22 29904 ChimerSeq STARFusion TCGA_RNA-Seq GGT7-IGH@ GGT7 chr20 33451186 - IGH@ chr14 106237747 - Exonic hg19 HNSC TCGA-HD-7754 11 1 Out-of-frame Inter-chr q11.22 32.33 29905 ChimerSeq STARFusion TCGA_RNA-Seq P4HB-ARHGDIA P4HB chr17 79813018 - ARHGDIA chr17 79827833 - Exonic hg19 HNSC TCGA-HD-7754 4 17 CDS-5'UTR Intra-chr q25.3 q25.3 29906 ChimerSeq STARFusion TCGA_RNA-Seq ARHGDIA-CDC27 ARHGDIA chr17 79827341 - CDC27 chr17 45214727 - Exonic hg19 HNSC TCGA-HD-7754 4 11 Out-of-frame Intra-chr q25.3 q21.32 29907 ChimerSeq STARFusion TCGA_RNA-Seq SERPINH1-IGH@ SERPINH1 chr11 75273149 + IGH@ chr14 106330846 - Exonic hg19 HNSC TCGA-CR-7404 11 2 Out-of-frame Inter-chr q13.5 32.33 29908 ChimerSeq STARFusion TCGA_RNA-Seq AK3-RCL1 AK3 chr9 4722506 - RCL1 chr9 4823548 + Exonic hg19 HNSC TCGA-CR-7399 44 173 In-Frame Intra-chr p24.1 p24.1 Seq+ 29909 ChimerSeq STARFusion TCGA_RNA-Seq AK3-RCL1 AK3 chr9 4740937 - RCL1 chr9 4823548 + Exonic hg19 HNSC TCGA-CR-7399 28 168 In-Frame Intra-chr p24.1 p24.1 Seq+ 29910 ChimerSeq STARFusion TCGA_RNA-Seq DGCR2-ANO1 DGCR2 chr22 19109641 - ANO1 chr11 69949172 + Exonic hg19 HNSC TCGA-CR-7399 28 123 Out-of-frame Inter-chr q11.21 q13.3 Seq+ 29911 ChimerSeq STARFusion TCGA_RNA-Seq VTI1B-PLEKHH1 VTI1B chr14 68123133 - PLEKHH1 chr14 68052285 + Exonic hg19 HNSC TCGA-CR-7399 7 49 In-Frame Intra-chr q24.1 q24.1 Seq+ 29912 ChimerSeq STARFusion TCGA_RNA-Seq VTI1B-PLEKHH1 VTI1B chr14 68123133 - PLEKHH1 chr14 68050712 + Exonic hg19 HNSC TCGA-CR-7399 3 46 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 29913 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGH@ INTS1 chr7 1511982 - IGH@ chr14 106209411 - Exonic hg19 HNSC TCGA-TN-A7HI 4 1 Out-of-frame Inter-chr p22.3 32.33 29914 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG3 STK25 chr2 242434915 - IGHG3 chr14 106237745 - Exonic hg19 HNSC TCGA-TN-A7HL 19 1 Out-of-frame Inter-chr q37.3 29915 ChimerSeq STARFusion TCGA_RNA-Seq AFG3L2-IGKC AFG3L2 chr18 12358733 - IGKC chr2 89157198 - Exonic hg19 HNSC TCGA-CR-7391 28 2 Out-of-frame Inter-chr p11.21 p11.2 29916 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHGP STK25 chr2 242434915 - IGHGP chr14 106136184 - Exonic hg19 HNSC TCGA-CR-7391 24 1 Out-of-frame Inter-chr q37.3 29917 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHGP STK25 chr2 242434915 - IGHGP chr14 106209410 - Exonic hg19 HNSC TCGA-CR-7391 8 1 Out-of-frame Inter-chr q37.3 29918 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-TES IGH@ chr14 106691671 - TES chr7 115863015 + Exonic hg19 HNSC TCGA-CR-7391 6 2 Out-of-frame Inter-chr 32.33 q31.2 Tumor suppressor gene 29919 ChimerSeq STARFusion TCGA_RNA-Seq SHC1-EFNA3 SHC1 chr1 154938019 - EFNA3 chr1 155057567 + Exonic hg19 HNSC TCGA-CR-7390 10 55 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 29920 ChimerSeq STARFusion TCGA_RNA-Seq SHC1-EFNA3 SHC1 chr1 154938019 - EFNA3 chr1 155057567 + Exonic hg19 HNSC TCGA-CR-7390 9 53 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 29921 ChimerSeq STARFusion TCGA_RNA-Seq SPIDR-SNX7 SPIDR chr8 48626203 + SNX7 chr1 99225610 + Exonic hg19 HNSC TCGA-CR-7390 7 21 Out-of-frame Inter-chr q11.21 p21.3 Seq+ 29922 ChimerSeq STARFusion TCGA_RNA-Seq SLC19A1-KRT4 SLC19A1 chr21 46951569 - KRT4 chr12 53207605 - Exonic hg19 HNSC TCGA-CR-7393 10 2 Out-of-frame Inter-chr q22.3 q13.13 29923 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ZNF207 IGH@ chr14 106552291 - ZNF207 chr17 30695073 + Exonic hg19 HNSC TCGA-CR-7392 11 1 Out-of-frame Inter-chr 32.33 q11.2 Transcription factor 29924 ChimerSeq STARFusion TCGA_RNA-Seq HSPA2-IGH@ HSPA2 chr14 65007497 + IGH@ chr14 106330067 - Exonic hg19 HNSC TCGA-CR-7392 9 1 Out-of-frame Intra-chr q23.3 32.33 29925 ChimerSeq STARFusion TCGA_RNA-Seq LRRC1-MLIP LRRC1 chr6 53660213 + MLIP chr6 53989271 + Exonic hg19 HNSC TCGA-CR-7392 3 24 In-Frame Intra-chr p12.1 p12.1 Seq+ 29926 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ATP6V0D1 IGH@ chr14 106518401 - ATP6V0D1 chr16 67479790 - Exonic hg19 HNSC TCGA-CR-7392 7 1 Out-of-frame Inter-chr 32.33 q22.1 29927 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-GOLGA2 IGH@ chr14 106478108 - GOLGA2 chr9 131024103 - Exonic hg19 HNSC TCGA-CR-7392 7 1 Out-of-frame Inter-chr 32.33 q34.11 29928 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-NADK GNB1 chr1 1822259 - NADK chr1 1688749 - Exonic hg19 HNSC TCGA-CR-7395 11 15 5'UTR-CDS Intra-chr p36.33 p36.33 Seq+ 29929 ChimerSeq STARFusion TCGA_RNA-Seq NCKAP5-LYPD1 NCKAP5 chr2 133887550 - LYPD1 chr2 133403853 - Exonic hg19 HNSC TCGA-CR-7395 4 15 Out-of-frame Intra-chr q21.2 q21.2 29930 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242532 + KRT14 chr17 39768618 - Exonic hg19 HNSC TCGA-CR-7395 5 6 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29931 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242532 + KRT14 chr17 39742770 - Exonic hg19 HNSC TCGA-CR-7395 4 6 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29932 ChimerSeq STARFusion TCGA_RNA-Seq RXRA-IGH@ RXRA chr9 137326058 + IGH@ chr14 106111065 - Exonic hg19 HNSC TCGA-CR-7395 5 1 Out-of-frame Inter-chr q34.2 Transcription factor 32.33 29933 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242540 + KRT14 chr17 39768611 - Exonic hg19 HNSC TCGA-CR-7395 3 5 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29934 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242522 + KRT14 chr17 39742780 - Exonic hg19 HNSC TCGA-CR-7395 3 5 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29935 ChimerSeq STARFusion TCGA_RNA-Seq KRT5-ALDOA KRT5 chr12 52910969 - ALDOA chr16 30080931 + Exonic hg19 HNSC TCGA-CR-7395 3 5 Out-of-frame Inter-chr q13.13 p11.2 29936 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-KRT6A IGH@ chr14 106174438 - KRT6A chr12 52886987 - Exonic hg19 HNSC TCGA-CR-7394 3 196 Out-of-frame Inter-chr 32.33 q13.13 29937 ChimerSeq STARFusion TCGA_RNA-Seq IGHA1-KRT6A IGHA1 chr14 106174438 - KRT6A chr12 52886987 - Exonic hg19 HNSC TCGA-CR-7394 3 57 Out-of-frame Inter-chr q13.13 29938 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHGP GAS6 chr13 114525073 - IGHGP chr14 106136185 - Exonic hg19 HNSC TCGA-CR-7394 6 1 Out-of-frame Inter-chr q34 Oncogene 29939 ChimerSeq STARFusion TCGA_RNA-Seq RXRA-IGHG2 RXRA chr9 137326057 + IGHG2 chr14 106111066 - Exonic hg19 HNSC TCGA-CR-7394 5 1 Out-of-frame Inter-chr q34.2 Transcription factor 29940 ChimerSeq STARFusion TCGA_RNA-Seq SCMH1-SHISA5 SCMH1 chr1 41651793 - SHISA5 chr3 48538726 - Exonic hg19 HNSC TCGA-CR-7397 2 34 In-Frame Inter-chr p34.2 Transcription factor p21.31 Seq+ 29941 ChimerSeq STARFusion TCGA_RNA-Seq ITCH-CASS4 ITCH chr20 33012331 + CASS4 chr20 55020956 + Exonic hg19 HNSC TCGA-CR-7397 2 15 Out-of-frame Intra-chr q11.22 q13.31 Seq+ 29942 ChimerSeq STARFusion TCGA_RNA-Seq S100A9-KRT17 S100A9 chr1 153333416 + KRT17 chr17 39780380 - Exonic hg19 HNSC TCGA-CV-A465 3 98 Out-of-frame Inter-chr q21.3 q21.2 29943 ChimerSeq STARFusion TCGA_RNA-Seq ZNF267-GPR180 ZNF267 chr16 31896577 + GPR180 chr13 95273332 + Exonic hg19 HNSC TCGA-CV-A465 5 36 In-Frame Inter-chr p11.2 Transcription factor q32.1 Seq+ 29944 ChimerSeq STARFusion TCGA_RNA-Seq ZNF267-GPR180 ZNF267 chr16 31901571 + GPR180 chr13 95273332 + Exonic hg19 HNSC TCGA-CV-A465 3 35 Out-of-frame Inter-chr p11.2 Transcription factor q32.1 Seq+ 29945 ChimerSeq STARFusion TCGA_RNA-Seq C2orf15-FAM178B C2orf15 chr2 99797712 + FAM178B chr2 97626177 - Exonic hg19 HNSC TCGA-CV-A465 8 2 3'UTR-CDS Intra-chr q11.2 q11.2 29946 ChimerSeq STARFusion TCGA_RNA-Seq MRPL30-FAM178B MRPL30 chr2 99797712 + FAM178B chr2 97626177 - Exonic hg19 HNSC TCGA-CV-A465 8 2 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 29947 ChimerSeq STARFusion TCGA_RNA-Seq C16orf58-ITGAM C16orf58 chr16 31500741 - ITGAM chr16 31284735 + Exonic hg19 HNSC TCGA-CV-A465 4 15 Out-of-frame Intra-chr p11.2 p11.2 29948 ChimerSeq STARFusion TCGA_RNA-Seq KRT6B-FTSJ3 KRT6B chr12 52844316 - FTSJ3 chr17 61907258 - Exonic hg19 HNSC TCGA-CV-A465 5 3 Out-of-frame Inter-chr q13.13 q23.3 29949 ChimerSeq STARFusion TCGA_RNA-Seq ZNF462-RAD23B ZNF462 chr9 109746690 + RAD23B chr9 110068660 + Exonic hg19 HNSC TCGA-CV-A464 2 20 In-Frame Intra-chr q31.2 Transcription factor q31.2 Tumor suppressor gene Seq+ 29950 ChimerSeq STARFusion TCGA_RNA-Seq MOB3A-DAND5 MOB3A chr19 2078139 - DAND5 chr19 13084203 + Exonic hg19 HNSC TCGA-CV-A461 6 13 Out-of-frame Intra-chr p13.3 p13.13 Seq+ 29951 ChimerSeq STARFusion TCGA_RNA-Seq CDC42EP4-SDK2 CDC42EP4 chr17 71308032 - SDK2 chr17 71335079 - Exonic hg19 HNSC TCGA-CV-A460 11 43 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 29952 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525073 - IGHG1 chr14 106209411 - Exonic hg19 HNSC TCGA-CV-A460 6 2 Out-of-frame Inter-chr q34 Oncogene q32.33 29953 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57756880 + VMP1 chr17 57895073 + Exonic hg19 HNSC TCGA-CV-A463 41 298 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 29954 ChimerSeq STARFusion TCGA_RNA-Seq S100A9-KRT17 S100A9 chr1 153333413 + KRT17 chr17 39780390 - Exonic hg19 HNSC TCGA-CV-A463 4 62 Out-of-frame Inter-chr q21.3 q21.2 29955 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-KRT14 TPT1 chr13 45911005 - KRT14 chr17 39778726 - Exonic hg19 HNSC TCGA-CV-A463 3 28 Out-of-frame Inter-chr q14.13 q21.2 29956 ChimerSeq STARFusion TCGA_RNA-Seq PLXDC2-KRT5 PLXDC2 chr10 20105754 + KRT5 chr12 52911462 - Exonic hg19 HNSC TCGA-CV-A463 9 1 Out-of-frame Inter-chr p12.31 q13.13 29957 ChimerSeq STARFusion TCGA_RNA-Seq NRBP1-IGHA1 NRBP1 chr2 27664676 + IGHA1 chr14 106175002 - Exonic hg19 HNSC TCGA-CV-A468 6 1 Out-of-frame Inter-chr p23.3 Other:NRBP Tumor suppressor gene 29958 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57725762 + VMP1 chr17 57915656 + Exonic hg19 HNSC TCGA-CV-5973 11 77 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 29959 ChimerSeq STARFusion TCGA_RNA-Seq NFYA-TSPO2 NFYA chr6 41062236 + TSPO2 chr6 41010705 + Exonic hg19 HNSC TCGA-CV-5973 4 36 CDS-5'UTR Intra-chr p21.1 Transcription factor p21.1 Seq+ 29960 ChimerSeq STARFusion TCGA_RNA-Seq OTUB1-RPS6KA4 OTUB1 chr11 63756224 + RPS6KA4 chr11 64132773 + Exonic hg19 HNSC TCGA-CV-5973 3 14 In-Frame Intra-chr q13.1 q13.1 Seq+ 29961 ChimerSeq STARFusion TCGA_RNA-Seq KRT16-KIF13B KRT16 chr17 39767891 - KIF13B chr8 29005037 - Exonic hg19 HNSC TCGA-CV-5970 6 4 Out-of-frame Inter-chr q21.2 p12 29962 ChimerSeq STARFusion TCGA_RNA-Seq KRT17-CANT1 KRT17 chr17 39776788 - CANT1 chr17 76996299 - Exonic hg19 HNSC TCGA-CV-5977 3 4 CDS-5'UTR Intra-chr q21.2 q25.3 29963 ChimerSeq STARFusion TCGA_RNA-Seq ITGB4-SAP30BP ITGB4 chr17 73733725 + SAP30BP chr17 73667896 + Exonic hg19 HNSC TCGA-CV-5976 5 18 In-Frame Intra-chr q25.1 q25.1 Seq+ 29964 ChimerSeq STARFusion TCGA_RNA-Seq GABARAP-GPS2 GABARAP chr17 7144743 - GPS2 chr17 7217978 - Exonic hg19 HNSC TCGA-CV-5979 29 74 Out-of-frame Intra-chr p13.1 Tumor suppressor gene p13.1 Seq+ 29965 ChimerSeq STARFusion TCGA_RNA-Seq ADD1-ADK ADD1 chr4 2845751 + ADK chr10 76153899 + Exonic hg19 HNSC TCGA-CV-5978 7 30 5'UTR-CDS Inter-chr p16.3 q22.2 Seq+ 29966 ChimerSeq STARFusion TCGA_RNA-Seq EFTUD2-KRT24 EFTUD2 chr17 42956924 - KRT24 chr17 38858185 - Exonic hg19 HNSC TCGA-CN-5370 60 188 In-Frame Intra-chr q21.31 q21.2 Seq+ 29967 ChimerSeq STARFusion TCGA_RNA-Seq THBS1-NRG1 THBS1 chr15 39876623 + NRG1 chr8 32585467 + Exonic hg19 HNSC TCGA-CN-5370 20 71 Out-of-frame Inter-chr q14 Oncogene Tumor suppressor gene p12 Seq+ 29968 ChimerSeq STARFusion TCGA_RNA-Seq RBM3-COL1A1 RBM3 chrX 48434090 + COL1A1 chr17 48264909 - Exonic hg19 HNSC TCGA-CN-5370 10 2 Out-of-frame Inter-chr p11.23 q21.33 Oncogene 29969 ChimerSeq STARFusion TCGA_RNA-Seq EXT1-SAMD12 EXT1 chr8 119122324 - SAMD12 chr8 119209971 - Exonic hg19 HNSC TCGA-CN-5370 3 13 Out-of-frame Intra-chr q24.11 Oncogene Tumor suppressor gene q24.12 Seq+ 29970 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242540 + KRT14 chr17 39768611 - Exonic hg19 HNSC TCGA-CN-5370 4 6 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 29971 ChimerSeq STARFusion TCGA_RNA-Seq FOXP1-PXDNL FOXP1 chr3 71542577 - PXDNL chr8 52412330 - Exonic hg19 HNSC TCGA-CN-5370 2 10 5'UTR-CDS Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor q11.23 Seq+ 29972 ChimerSeq STARFusion TCGA_RNA-Seq SFN-KRT17 SFN chr1 27190722 + KRT17 chr17 39780808 - Exonic hg19 HNSC TCGA-CN-5373 3 45 Out-of-frame Inter-chr p36.11 Tumor suppressor gene q21.2 29973 ChimerSeq STARFusion TCGA_RNA-Seq S100A9-KRT17 S100A9 chr1 153333416 + KRT17 chr17 39780387 - Exonic hg19 HNSC TCGA-CN-5373 4 30 Out-of-frame Inter-chr q21.3 q21.2 29974 ChimerSeq STARFusion TCGA_RNA-Seq PLXDC2-KRT5 PLXDC2 chr10 20105754 + KRT5 chr12 52911462 - Exonic hg19 HNSC TCGA-CN-5373 10 2 Out-of-frame Inter-chr p12.31 q13.13 29975 ChimerSeq STARFusion TCGA_RNA-Seq CALML5-KRT16 CALML5 chr10 5541044 - KRT16 chr17 39767622 - Exonic hg19 HNSC TCGA-CN-5373 3 19 Out-of-frame Inter-chr p15.1 q21.2 29976 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH1-SDCCAG3 NOTCH1 chr9 139411724 - SDCCAG3 chr9 139297339 - Exonic hg19 HNSC TCGA-CN-5373 2 10 Out-of-frame Intra-chr q34.3 Oncogene Tumor suppressor gene q34.3 Seq+ 29977 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SPON2 IGH@ chr14 106452669 - SPON2 chr4 1202625 - Exonic hg19 HNSC TCGA-CR-6487 208 1 Out-of-frame Inter-chr 32.33 p16.3 29978 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-POM121 IGL@ chr22 22677321 + POM121 chr7 72413827 + Exonic hg19 HNSC TCGA-CR-6487 62 1 Out-of-frame Inter-chr q11.22 q11.23 29979 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-HSPA1A IGH@ chr14 106174434 - HSPA1A chr6 31784799 + Exonic hg19 HNSC TCGA-CR-6487 5 186 Out-of-frame Inter-chr 32.33 29980 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-HSPA1A IGH@ chr14 106174458 - HSPA1A chr6 31784799 + Exonic hg19 HNSC TCGA-CR-6487 4 184 Out-of-frame Inter-chr 32.33 29981 ChimerSeq STARFusion TCGA_RNA-Seq TSC1-DOLPP1 TSC1 chr9 135796750 - DOLPP1 chr9 131848988 + Exonic hg19 HNSC TCGA-CR-6487 16 62 In-Frame Intra-chr q34.13 Oncogene Tumor suppressor gene q34.11 Seq+ 29982 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-UGGT1 IGL@ chr22 23063636 + UGGT1 chr2 128890795 + Exonic hg19 HNSC TCGA-CR-6487 22 3 Out-of-frame Inter-chr q11.22 q14.3 29983 ChimerSeq STARFusion TCGA_RNA-Seq IGHGP-NOTCH1 IGHGP chr14 106134591 - NOTCH1 chr9 139403429 - Exonic hg19 HNSC TCGA-CR-6487 22 1 Out-of-frame Inter-chr q34.3 Oncogene Tumor suppressor gene Seq+ 29984 ChimerSeq STARFusion TCGA_RNA-Seq IGHA1-HSPA1B IGHA1 chr14 106174434 - HSPA1B chr6 31796993 + Exonic hg19 HNSC TCGA-CR-6487 5 62 Out-of-frame Inter-chr 29985 ChimerSeq STARFusion TCGA_RNA-Seq IGHA1-HSPA1B IGHA1 chr14 106174458 - HSPA1B chr6 31796993 + Exonic hg19 HNSC TCGA-CR-6487 4 62 Out-of-frame Inter-chr 29986 ChimerSeq STARFusion TCGA_RNA-Seq HCFC1-IGHG1 HCFC1 chrX 153222120 - IGHG1 chr14 106209409 - Exonic hg19 HNSC TCGA-CR-6487 8 5 Out-of-frame Inter-chr q28 q32.33 29987 ChimerSeq STARFusion TCGA_RNA-Seq KRT6A-IGL@ KRT6A chr12 52881876 - IGL@ chr22 23247171 + Exonic hg19 HNSC TCGA-CR-6484 40 16 Out-of-frame Inter-chr q13.13 q11.22 29988 ChimerSeq STARFusion TCGA_RNA-Seq KRT6B-IGLC3 KRT6B chr12 52841346 - IGLC3 chr22 23247171 + Exonic hg19 HNSC TCGA-CR-6484 41 7 Out-of-frame Inter-chr q13.13 q11.22 29989 ChimerSeq STARFusion TCGA_RNA-Seq KRT6B-IGLJ3 KRT6B chr12 52841346 - IGLJ3 chr22 23247171 + Exonic hg19 HNSC TCGA-CR-6484 41 1 Out-of-frame Inter-chr q13.13 q11.22 29990 ChimerSeq STARFusion TCGA_RNA-Seq KRT6A-IGL@ KRT6A chr12 52881876 - IGL@ chr22 23241801 + Exonic hg19 HNSC TCGA-CR-6484 29 16 Out-of-frame Inter-chr q13.13 q11.22 29991 ChimerSeq STARFusion TCGA_RNA-Seq KRT6B-IGLC3 KRT6B chr12 52841346 - IGLC3 chr22 23241801 + Exonic hg19 HNSC TCGA-CR-6484 29 7 Out-of-frame Inter-chr q13.13 q11.22 29992 ChimerSeq STARFusion TCGA_RNA-Seq AGAP1-UBE2F AGAP1 chr2 236403493 + UBE2F chr2 238881734 + Exonic hg19 HNSC TCGA-CR-6484 7 56 CDS-5'UTR Intra-chr q37.2 q37.3 Seq+ 29993 ChimerSeq STARFusion TCGA_RNA-Seq AGAP1-UBE2F AGAP1 chr2 236403493 + UBE2F chr2 238896605 + Exonic hg19 HNSC TCGA-CR-6484 5 56 In-Frame Intra-chr q37.2 q37.3 Seq+ 29994 ChimerSeq STARFusion TCGA_RNA-Seq ZMIZ2-IGH@ ZMIZ2 chr7 44808772 + IGH@ chr14 106136184 - Exonic hg19 HNSC TCGA-CR-6484 7 2 Out-of-frame Inter-chr p13 32.33 29995 ChimerSeq STARFusion TCGA_RNA-Seq TNKS1BP1-IGHG2 TNKS1BP1 chr11 57067185 - IGHG2 chr14 106111130 - Exonic hg19 HNSC TCGA-CR-6482 12 1 Out-of-frame Inter-chr q12.1 29996 ChimerSeq STARFusion TCGA_RNA-Seq HSPA4-IGL@ HSPA4 chr5 132387688 + IGL@ chr22 23247171 + Exonic hg19 HNSC TCGA-CR-6482 9 1 Out-of-frame Inter-chr q31.1 q11.22 29997 ChimerSeq STARFusion TCGA_RNA-Seq HSPA4-IGL@ HSPA4 chr5 132387688 + IGL@ chr22 23241801 + Exonic hg19 HNSC TCGA-CR-6482 7 1 Out-of-frame Inter-chr q31.1 q11.22 29998 ChimerSeq STARFusion TCGA_RNA-Seq C1orf174-RAD18 C1orf174 chr1 3809447 - RAD18 chr3 8923143 - Exonic hg19 HNSC TCGA-CR-6480 31 106 Out-of-frame Inter-chr p36.32 p25.3 Seq+ 29999 ChimerSeq STARFusion TCGA_RNA-Seq PPARA-SLC16A7 PPARA chr22 46572733 + SLC16A7 chr12 60048933 + Exonic hg19 HNSC TCGA-CR-6480 4 44 5'UTR-5'UTR Inter-chr q13.31 Tumor suppressor gene Transcription factor q14.1 Seq+ 30000 ChimerSeq STARFusion TCGA_RNA-Seq PPARA-SLC16A7 PPARA chr22 46547873 + SLC16A7 chr12 60048933 + Exonic hg19 HNSC TCGA-CR-6480 4 42 5'UTR-5'UTR Inter-chr q13.31 Tumor suppressor gene Transcription factor q14.1 Seq+ 30001 ChimerSeq STARFusion TCGA_RNA-Seq LINC00511-PPP4R1 LINC00511 chr17 70424377 - PPP4R1 chr18 9595100 - Exonic hg19 HNSC TCGA-CR-6480 7 22 3'UTR-CDS Inter-chr q24.3 p11.22 30002 ChimerSeq STARFusion TCGA_RNA-Seq B3GNT4-IGHG1 B3GNT4 chr12 122691086 + IGHG1 chr14 106209409 - Exonic hg19 HNSC TCGA-CR-6480 9 1 Out-of-frame Inter-chr q24.31 q32.33 30003 ChimerSeq STARFusion TCGA_RNA-Seq B3GNT4-IGHG1 B3GNT4 chr12 122691086 + IGHG1 chr14 106237744 - Exonic hg19 HNSC TCGA-CR-6480 8 1 Out-of-frame Inter-chr q24.31 q32.33 30004 ChimerSeq STARFusion TCGA_RNA-Seq LINC00511-PPP4R1 LINC00511 chr17 70416841 - PPP4R1 chr18 9595100 - Exonic hg19 HNSC TCGA-CR-6480 2 22 3'UTR-CDS Inter-chr q24.3 p11.22 30005 ChimerSeq STARFusion TCGA_RNA-Seq KIF21A-IGKC KIF21A chr12 39725532 - IGKC chr2 89160769 - Exonic hg19 HNSC TCGA-CR-6481 101 0 Out-of-frame Inter-chr q12 p11.2 30006 ChimerSeq STARFusion TCGA_RNA-Seq KIF21A-IGKJ3 KIF21A chr12 39725532 - IGKJ3 chr2 89160769 - Exonic hg19 HNSC TCGA-CR-6481 101 0 Out-of-frame Inter-chr q12 p11.2 Seq+ 30007 ChimerSeq STARFusion TCGA_RNA-Seq CMC1-ZCWPW2 CMC1 chr3 28283303 + ZCWPW2 chr3 28476601 + Exonic hg19 HNSC TCGA-CR-6481 2 13 Out-of-frame Intra-chr p24.1 p24.1 Seq+ 30008 ChimerSeq STARFusion TCGA_RNA-Seq CREB3-TLN1 CREB3 chr9 35733279 + TLN1 chr9 35725724 - Exonic hg19 HNSC TCGA-CR-6488 12 76 CDS-5'UTR Intra-chr p13.3 Transcription factor p13.3 Seq+ 30009 ChimerSeq STARFusion TCGA_RNA-Seq AATF-PCDH11X AATF chr17 35388982 + PCDH11X chrX 91873263 + Exonic hg19 HNSC TCGA-CR-6488 3 19 Out-of-frame Inter-chr q21.31 Seq+ 30010 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 HNSC TCGA-CR-6488 5 4 In-Frame Intra-chr p13.3 p13.3 30011 ChimerSeq STARFusion TCGA_RNA-Seq LGALS3BP-KRT14 LGALS3BP chr17 76969181 - KRT14 chr17 39739392 - Exonic hg19 HNSC TCGA-HD-A6I0 5 2 In-Frame Intra-chr q25.3 q21.2 30012 ChimerSeq STARFusion TCGA_RNA-Seq C17orf96-KRT14 C17orf96 chr17 36829160 - KRT14 chr17 39739846 - Exonic hg19 HNSC TCGA-HD-A6I0 5 1 Out-of-frame Intra-chr q21.2 30013 ChimerSeq STARFusion TCGA_RNA-Seq SFN-YWHAG SFN chr1 27190112 + YWHAG chr7 75959255 - Exonic hg19 HNSC TCGA-HD-A6I0 5 1 Out-of-frame Inter-chr p36.11 Tumor suppressor gene q11.23 30014 ChimerSeq STARFusion TCGA_RNA-Seq IGHGP-TINAGL1 IGHGP chr14 106134591 - TINAGL1 chr1 32052503 + Exonic hg19 HNSC TCGA-H7-A76A 14 1 Out-of-frame Inter-chr p35.2 30015 ChimerSeq STARFusion TCGA_RNA-Seq DENND1A-NDUFA8 DENND1A chr9 126371715 - NDUFA8 chr9 124914687 - Exonic hg19 HNSC TCGA-H7-A76A 5 17 In-Frame Intra-chr q33.3 q33.2 Seq+ 30016 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-HERC2 IGH@ chr14 107034730 - HERC2 chr15 28517325 - Exonic hg19 HNSC TCGA-H7-A76A 6 2 Out-of-frame Inter-chr 32.33 30017 ChimerSeq STARFusion TCGA_RNA-Seq S100A9-KRT17 S100A9 chr1 153333416 + KRT17 chr17 39780387 - Exonic hg19 HNSC TCGA-H7-7774 3 71 Out-of-frame Inter-chr q21.3 q21.2 30018 ChimerSeq STARFusion TCGA_RNA-Seq KRT14-DMKN KRT14 chr17 39738572 - DMKN chr19 35996641 - Exonic hg19 HNSC TCGA-H7-7774 3 12 Out-of-frame Inter-chr q21.2 q13.12 30019 ChimerSeq STARFusion TCGA_RNA-Seq UTP6-BCAS3 UTP6 chr17 30214255 - BCAS3 chr17 59112027 + Exonic hg19 HNSC TCGA-F7-A50I 2 3 Out-of-frame Intra-chr q11.2 q23.2 Seq+ 30020 ChimerSeq STARFusion TCGA_RNA-Seq KRT14-FKBP8 KRT14 chr17 39740126 - FKBP8 chr19 18649176 - Exonic hg19 HNSC TCGA-F7-A50J 5 1 Out-of-frame Inter-chr q21.2 p13.11 30021 ChimerSeq STARFusion TCGA_RNA-Seq AEBP2-GYS2 AEBP2 chr12 19646920 + GYS2 chr12 21699404 - Exonic hg19 HNSC TCGA-F7-A50G 24 93 Out-of-frame Intra-chr p12.3 Transcription factor p12.1 Seq+ 30022 ChimerSeq STARFusion TCGA_RNA-Seq KRT6C-FTSJ3 KRT6C chr12 52865976 - FTSJ3 chr17 61907258 - Exonic hg19 HNSC TCGA-F7-A50G 17 1 Out-of-frame Inter-chr q13.13 q23.3 30023 ChimerSeq STARFusion TCGA_RNA-Seq KRT6C-FTSJ3 KRT6C chr12 52844316 - FTSJ3 chr17 61907258 - Exonic hg19 HNSC TCGA-F7-A50G 8 1 Out-of-frame Inter-chr q13.13 q23.3 30024 ChimerSeq STARFusion TCGA_RNA-Seq KRT6B-SPTBN2 KRT6B chr12 52843254 - SPTBN2 chr11 66472248 - Exonic hg19 HNSC TCGA-F7-A50G 6 1 Out-of-frame Inter-chr q13.13 q13.2 30025 ChimerSeq STARFusion TCGA_RNA-Seq RPS9-KRT17 RPS9 chr19 54711294 + KRT17 chr17 39780378 - Exonic hg19 HNSC TCGA-F7-A50G 3 5 Out-of-frame Inter-chr q21.2 30026 ChimerSeq STARFusion TCGA_RNA-Seq ABL1-EXOSC2 ABL1 chr9 133589842 + EXOSC2 chr9 133570879 + Exonic hg19 HNSC TCGA-CV-6950 2 11 Out-of-frame Intra-chr q34.12 TK:Abl Oncogene q34.12 Seq+ 30027 ChimerSeq STARFusion TCGA_RNA-Seq CUL5-ATM CUL5 chr11 107969256 + ATM chr11 108235809 + Exonic hg19 HNSC TCGA-CV-6952 5 11 In-Frame Intra-chr q22.3 Tumor suppressor gene q22.3 Atypical:PIKK Oncogene Tumor suppressor gene Seq+ 30028 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHGP STK25 chr2 242434915 - IGHGP chr14 106136184 - Exonic hg19 HNSC TCGA-CV-6953 142 1 Out-of-frame Inter-chr q37.3 30029 ChimerSeq STARFusion TCGA_RNA-Seq RPN2-IGH@ RPN2 chr20 35833207 + IGH@ chr14 106330466 - Exonic hg19 HNSC TCGA-CV-6953 86 2 Out-of-frame Inter-chr q11.23 32.33 30030 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHGP STK25 chr2 242434915 - IGHGP chr14 106209410 - Exonic hg19 HNSC TCGA-CV-6953 62 1 Out-of-frame Inter-chr q37.3 30031 ChimerSeq STARFusion TCGA_RNA-Seq S100A9-IGH@ S100A9 chr1 153330837 + IGH@ chr14 106209181 - Exonic hg19 HNSC TCGA-CV-6953 5 91 Out-of-frame Inter-chr q21.3 32.33 30032 ChimerSeq STARFusion TCGA_RNA-Seq S100A9-IGHG1 S100A9 chr1 153330837 + IGHG1 chr14 106209181 - Exonic hg19 HNSC TCGA-CV-6953 5 72 Out-of-frame Inter-chr q21.3 q32.33 Seq+ 30033 ChimerSeq STARFusion TCGA_RNA-Seq USP9X-MRPS31 USP9X chrX 41022130 + MRPS31 chr13 41303737 - Exonic hg19 HNSC TCGA-CV-6953 3 61 Out-of-frame Inter-chr p11.4 Oncogene q14.11 Seq+ 30034 ChimerSeq STARFusion TCGA_RNA-Seq USP9X-MRPS31 USP9X chrX 41012334 + MRPS31 chr13 41303737 - Exonic hg19 HNSC TCGA-CV-6953 2 61 In-Frame Inter-chr p11.4 Oncogene q14.11 Seq+ 30035 ChimerSeq STARFusion TCGA_RNA-Seq S100A9-KRT17 S100A9 chr1 153333416 + KRT17 chr17 39780387 - Exonic hg19 HNSC TCGA-CV-6953 3 55 Out-of-frame Inter-chr q21.3 q21.2 30036 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SPRR1B IGH@ chr14 106330425 - SPRR1B chr1 153004900 + Exonic hg19 HNSC TCGA-CV-6953 3 47 Out-of-frame Inter-chr 32.33 q21.3 30037 ChimerSeq STARFusion TCGA_RNA-Seq KRT5-S100A9 KRT5 chr12 52909599 - S100A9 chr1 153333166 + Exonic hg19 HNSC TCGA-CV-6953 3 45 Out-of-frame Inter-chr q13.13 q21.3 30038 ChimerSeq STARFusion TCGA_RNA-Seq SEPW1-EHD2 SEPW1 chr19 48282071 + EHD2 chr19 48219815 + Exonic hg19 HNSC TCGA-CV-6953 3 34 CDS-5'UTR Intra-chr q13.33 Seq+ 30039 ChimerSeq STARFusion TCGA_RNA-Seq SEPW1-EHD2 SEPW1 chr19 48284006 + EHD2 chr19 48219815 + Exonic hg19 HNSC TCGA-CV-6953 3 34 CDS-5'UTR Intra-chr q13.33 Seq+ 30040 ChimerSeq STARFusion TCGA_RNA-Seq ROCK1-B4GALT6 ROCK1 chr18 18690779 - B4GALT6 chr18 29246335 - Exonic hg19 HNSC TCGA-CV-6953 5 18 Out-of-frame Intra-chr q11.1 AGC:DMPK q12.1 Seq+ 30041 ChimerSeq STARFusion TCGA_RNA-Seq IKBKG-GAB3 IKBKG chrX 153775960 + GAB3 chrX 153944604 - Exonic hg19 HNSC TCGA-CV-6953 3 21 5'UTR-CDS Intra-chr q28 q28 Seq+ 30042 ChimerSeq STARFusion TCGA_RNA-Seq DTX4-IGH@ DTX4 chr11 58949325 + IGH@ chr14 106330832 - Exonic hg19 HNSC TCGA-CV-6953 8 0 Out-of-frame Inter-chr q12.1 32.33 30043 ChimerSeq STARFusion TCGA_RNA-Seq DTX4-IGHG3 DTX4 chr11 58949325 + IGHG3 chr14 106330832 - Exonic hg19 HNSC TCGA-CV-6953 8 0 Out-of-frame Inter-chr q12.1 30044 ChimerSeq STARFusion TCGA_RNA-Seq DTX4-IGHJ3 DTX4 chr11 58949325 + IGHJ3 chr14 106330832 - Exonic hg19 HNSC TCGA-CV-6953 8 0 Out-of-frame Inter-chr q12.1 q32.33 30045 ChimerSeq STARFusion TCGA_RNA-Seq IGHJ4-SPRR1B IGHJ4 chr14 106330425 - SPRR1B chr1 153004900 + Exonic hg19 HNSC TCGA-CV-6953 3 4 Out-of-frame Inter-chr q21.3 30046 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G3-KIF17 EIF4G3 chr1 21377359 - KIF17 chr1 21024981 - Exonic hg19 HNSC TCGA-CV-6954 17 65 5'UTR-CDS Intra-chr p36.12 p36.12 Seq+ 30047 ChimerSeq STARFusion TCGA_RNA-Seq FHOD3-MOCOS FHOD3 chr18 33952707 + MOCOS chr18 33836931 + Exonic hg19 HNSC TCGA-CV-6954 2 14 In-Frame Intra-chr q12.2 q12.2 Seq+ 30048 ChimerSeq STARFusion TCGA_RNA-Seq PI3-KRT6A PI3 chr20 43805102 + KRT6A chr12 52886999 - Exonic hg19 HNSC TCGA-CV-6955 3 57 Out-of-frame Inter-chr q13.12 q13.13 30049 ChimerSeq STARFusion TCGA_RNA-Seq FSCN1-FBXL18 FSCN1 chr7 5645015 + FBXL18 chr7 5478282 - Exonic hg19 HNSC TCGA-CV-6956 6 54 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 30050 ChimerSeq STARFusion TCGA_RNA-Seq KRT6A-FTSJ3 KRT6A chr12 52885432 - FTSJ3 chr17 61907258 - Exonic hg19 HNSC TCGA-CV-6959 12 1 Out-of-frame Inter-chr q13.13 q23.3 30051 ChimerSeq STARFusion TCGA_RNA-Seq E2F2-KIAA1919 E2F2 chr1 23835249 - KIAA1919 chr6 111588582 + Exonic hg19 HNSC TCGA-QK-AA3J 9 0 Out-of-frame Inter-chr Tumor suppressor gene Transcription factor 30052 ChimerSeq STARFusion TCGA_RNA-Seq IGHGP-TINAGL1 IGHGP chr14 106134590 - TINAGL1 chr1 32052504 + Exonic hg19 HNSC TCGA-T3-A92M 16 1 Out-of-frame Inter-chr p35.2 30053 ChimerSeq STARFusion TCGA_RNA-Seq ZMAT5-NIPSNAP1 ZMAT5 chr22 30162861 - NIPSNAP1 chr22 29957851 - Exonic hg19 HNSC TCGA-T3-A92M 5 11 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 30054 ChimerSeq STARFusion TCGA_RNA-Seq FHOD3-MOCOS FHOD3 chr18 33877963 + MOCOS chr18 33836931 + Exonic hg19 HNSC TCGA-T3-A92M 4 8 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 30055 ChimerSeq STARFusion TCGA_RNA-Seq ZMAT5-NIPSNAP1 ZMAT5 chr22 30162938 - NIPSNAP1 chr22 29957851 - Exonic hg19 HNSC TCGA-T3-A92M 2 10 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 30056 ChimerSeq STARFusion TCGA_RNA-Seq CCDC142-M1AP CCDC142 chr2 74708350 - M1AP chr2 74808974 - Exonic hg19 HNSC TCGA-T3-A92M 2 5 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 30057 ChimerSeq STARFusion TCGA_RNA-Seq BCL2L13-VPS8 BCL2L13 chr22 18178976 + VPS8 chr3 184616353 + Exonic hg19 HNSC TCGA-T3-A92N 4 11 In-Frame Inter-chr q11.21 q27.2 Seq+ 30058 ChimerSeq STARFusion TCGA_RNA-Seq S100A2-KRT13 S100A2 chr1 153534054 - KRT13 chr17 39661595 - Exonic hg19 HNSC TCGA-HD-8634 3 7 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q21.2 30059 ChimerSeq STARFusion TCGA_RNA-Seq CPT1A-SHANK2 CPT1A chr11 68609243 - SHANK2 chr11 70653276 - Exonic hg19 HNSC TCGA-CQ-5323 12 55 5'UTR-CDS Intra-chr q13.3 q13.4 Seq+ 30060 ChimerSeq STARFusion TCGA_RNA-Seq CPT1A-SHANK2 CPT1A chr11 68540733 - SHANK2 chr11 70885890 - Exonic hg19 HNSC TCGA-CQ-5323 6 55 CDS-5'UTR Intra-chr q13.3 q13.4 Seq+ 30061 ChimerSeq STARFusion TCGA_RNA-Seq CPT1A-SHANK2 CPT1A chr11 68540733 - SHANK2 chr11 70858384 - Exonic hg19 HNSC TCGA-CQ-5323 3 55 CDS-5'UTR Intra-chr q13.3 q13.4 Seq+ 30062 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGH@ HOMER2 chr15 83561493 - IGH@ chr14 106136184 - Exonic hg19 HNSC TCGA-CQ-5323 8 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene 32.33 30063 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGHG2 HOMER2 chr15 83561493 - IGHG2 chr14 106111129 - Exonic hg19 HNSC TCGA-CQ-5323 8 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene 30064 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGHG2 HOMER2 chr15 83561493 - IGHG2 chr14 106136184 - Exonic hg19 HNSC TCGA-CQ-5323 6 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene 30065 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-NUMA1 FCHSD2 chr11 72600874 - NUMA1 chr11 71717309 - Exonic hg19 HNSC TCGA-CQ-5323 2 9 In-Frame Intra-chr q13.4 q13.4 Oncogene Seq+ 30066 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGH@ HOMER2 chr15 83561493 - IGH@ chr14 106237745 - Exonic hg19 HNSC TCGA-CQ-5323 4 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene 32.33 30067 ChimerSeq STARFusion TCGA_RNA-Seq NAPG-IGH@ NAPG chr18 10540344 + IGH@ chr14 106330066 - Exonic hg19 HNSC TCGA-CQ-5323 4 1 Out-of-frame Inter-chr p11.22 32.33 30068 ChimerSeq STARFusion TCGA_RNA-Seq TMSB10-HAP1 TMSB10 chr2 85133236 + HAP1 chr17 39877732 - Exonic hg19 HNSC TCGA-CQ-5327 5 2 Out-of-frame Inter-chr p11.2 q21.2 30069 ChimerSeq STARFusion TCGA_RNA-Seq RPN2-KRT14 RPN2 chr20 35807744 + KRT14 chr17 39742735 - Exonic hg19 HNSC TCGA-CQ-5326 18 1 Out-of-frame Inter-chr q11.23 q21.2 30070 ChimerSeq STARFusion TCGA_RNA-Seq RWDD4-SORBS2 RWDD4 chr4 184572137 - SORBS2 chr4 186573882 - Exonic hg19 HNSC TCGA-CQ-5326 7 14 In-Frame Intra-chr q35.1 q35.1 Seq+ 30071 ChimerSeq STARFusion TCGA_RNA-Seq RPN2-KRT14 RPN2 chr20 35807744 + KRT14 chr17 39768583 - Exonic hg19 HNSC TCGA-CQ-5326 9 1 Out-of-frame Inter-chr q11.23 q21.2 30072 ChimerSeq STARFusion TCGA_RNA-Seq CERCAM-IGH@ CERCAM chr9 131184380 + IGH@ chr14 106330464 - Exonic hg19 HNSC TCGA-CQ-5325 105 1 Out-of-frame Inter-chr q34.11 32.33 30073 ChimerSeq STARFusion TCGA_RNA-Seq CERCAM-IGH@ CERCAM chr9 131184380 + IGH@ chr14 106330063 - Exonic hg19 HNSC TCGA-CQ-5325 82 1 Out-of-frame Inter-chr q34.11 32.33 30074 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB2-IGKC DNAJB2 chr2 220151425 + IGKC chr2 89156807 - Exonic hg19 HNSC TCGA-CQ-5325 8 1 Out-of-frame Intra-chr q35 p11.2 30075 ChimerSeq STARFusion TCGA_RNA-Seq EXOC5-IGKC EXOC5 chr14 57696554 - IGKC chr2 89161431 - Exonic hg19 HNSC TCGA-CQ-5325 6 1 Out-of-frame Inter-chr q22.3 p11.2 30076 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHG3 SLC7A5 chr16 87874670 - IGHG3 chr14 106330467 - Exonic hg19 HNSC TCGA-CQ-5325 4 1 Out-of-frame Inter-chr q24.2 30077 ChimerSeq STARFusion TCGA_RNA-Seq LGALS3-FBXO34 LGALS3 chr14 55607081 + FBXO34 chr14 55817099 + Exonic hg19 HNSC TCGA-CQ-5329 4 23 5'UTR-5'UTR Intra-chr q22.3 q22.3 30078 ChimerSeq STARFusion TCGA_RNA-Seq TRIP12-PID1 TRIP12 chr2 230744698 - PID1 chr2 230020680 - Exonic hg19 HNSC TCGA-CR-6467 12 57 Out-of-frame Intra-chr q36.3 q36.3 Seq+ 30079 ChimerSeq STARFusion TCGA_RNA-Seq GNB2-IGHG3 GNB2 chr7 100276040 + IGHG3 chr14 106330468 - Exonic hg19 HNSC TCGA-CR-6467 18 1 Out-of-frame Inter-chr q22.1 30080 ChimerSeq STARFusion TCGA_RNA-Seq TRIP12-DNER TRIP12 chr2 230786596 - DNER chr2 230456604 - Exonic hg19 HNSC TCGA-CR-6467 5 26 5'UTR-CDS Intra-chr q36.3 q36.3 Seq+ 30081 ChimerSeq STARFusion TCGA_RNA-Seq RAVER1-IGKC RAVER1 chr19 10431332 - IGKC chr2 89161433 - Exonic hg19 HNSC TCGA-CR-6467 11 1 Out-of-frame Inter-chr p13.2 p11.2 30082 ChimerSeq STARFusion TCGA_RNA-Seq TRIP12-DNER TRIP12 chr2 230786280 - DNER chr2 230456604 - Exonic hg19 HNSC TCGA-CR-6467 2 26 5'UTR-CDS Intra-chr q36.3 q36.3 Seq+ 30083 ChimerSeq STARFusion TCGA_RNA-Seq TTC12-LUC7L2 TTC12 chr11 113215162 + LUC7L2 chr7 139097297 + Exonic hg19 HNSC TCGA-CR-6467 3 16 In-Frame Inter-chr q23.2 q34 Seq+ 30084 ChimerSeq STARFusion TCGA_RNA-Seq TMEM104-DDX11L1 TMEM104 chr17 72815982 + DDX11L1 chr1 12010 + Exonic hg19 HNSC TCGA-CR-6467 2 12 CDS-3'UTR Inter-chr q25.1 p36.33 30085 ChimerSeq STARFusion TCGA_RNA-Seq RHPN2-SLC7A9 RHPN2 chr19 33512477 - SLC7A9 chr19 33333223 - Exonic hg19 HNSC TCGA-MT-A7BN 24 70 In-Frame Intra-chr q13.11 q13.11 30086 ChimerSeq STARFusion TCGA_RNA-Seq NT5DC1-SEC63 NT5DC1 chr6 116436933 + SEC63 chr6 108204350 - Exonic hg19 HNSC TCGA-MT-A7BN 24 46 In-Frame Intra-chr q22.1 q21 Seq+ 30087 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992064 + VMP1 chr17 57915656 + Exonic hg19 HNSC TCGA-CQ-6218 5 16 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 30088 ChimerSeq STARFusion TCGA_RNA-Seq AKAP13-RFX7 AKAP13 chr15 85924029 + RFX7 chr15 56379707 - Exonic hg19 HNSC TCGA-CQ-6219 11 56 5'UTR-3'UTR Intra-chr q25.3 q21.3 Transcription factor Seq+ 30089 ChimerSeq STARFusion TCGA_RNA-Seq LCN1-KRT13 LCN1 chr9 138413403 + KRT13 chr17 39657553 - Exonic hg19 HNSC TCGA-CV-7238 3 271 Out-of-frame Inter-chr q34.3 q21.2 30090 ChimerSeq STARFusion TCGA_RNA-Seq RNF216-MTHFD1L RNF216 chr7 5764955 - MTHFD1L chr6 151330955 + Exonic hg19 HNSC TCGA-CV-7236 22 70 In-Frame Inter-chr p22.1 q25.1 Seq+ 30091 ChimerSeq STARFusion TCGA_RNA-Seq MRPS17-FKBP9L MRPS17 chr7 55955373 + FKBP9L chr7 55780943 - Exonic hg19 HNSC TCGA-CV-7236 8 1 Out-of-frame Intra-chr p11.2 30092 ChimerSeq STARFusion TCGA_RNA-Seq MTHFD1L-RNF216 MTHFD1L chr6 151293194 + RNF216 chr7 5760803 - Exonic hg19 HNSC TCGA-CV-7236 3 12 In-Frame Inter-chr q25.1 p22.1 Seq+ 30093 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-MUC7 IGH@ chr14 106174438 - MUC7 chr4 71347970 + Exonic hg19 HNSC TCGA-CV-7235 3 94 Out-of-frame Inter-chr 32.33 q13.3 30094 ChimerSeq STARFusion TCGA_RNA-Seq IGHA1-MUC7 IGHA1 chr14 106174438 - MUC7 chr4 71347970 + Exonic hg19 HNSC TCGA-CV-7235 3 67 Out-of-frame Inter-chr q13.3 30095 ChimerSeq STARFusion TCGA_RNA-Seq MUC7-STATH MUC7 chr4 71347200 + STATH chr4 70866652 + Exonic hg19 HNSC TCGA-CV-7235 3 29 Out-of-frame Intra-chr q13.3 30096 ChimerSeq STARFusion TCGA_RNA-Seq LTF-VIM LTF chr3 46497371 - VIM chr10 17272163 + Exonic hg19 HNSC TCGA-CV-7235 6 5 Out-of-frame Inter-chr p21.31 Oncogene Tumor suppressor gene Transcription factor p13 Tumor suppressor gene 30097 ChimerSeq STARFusion TCGA_RNA-Seq C7orf41-PLEKHA8 C7orf41 chr7 30185915 + PLEKHA8 chr7 30168882 + Exonic hg19 HNSC TCGA-HD-7229 17 83 CDS-3'UTR Intra-chr p14.3 30098 ChimerSeq STARFusion TCGA_RNA-Seq CDC34-IGH@ CDC34 chr19 541659 + IGH@ chr14 106237742 - Exonic hg19 HNSC TCGA-HD-7229 12 1 Out-of-frame Inter-chr p13.3 32.33 30099 ChimerSeq STARFusion TCGA_RNA-Seq CDC34-IGHG1 CDC34 chr19 541659 + IGHG1 chr14 106209407 - Exonic hg19 HNSC TCGA-HD-7229 12 1 Out-of-frame Inter-chr p13.3 q32.33 30100 ChimerSeq STARFusion TCGA_RNA-Seq CDC34-IGHG1 CDC34 chr19 541659 + IGHG1 chr14 106237742 - Exonic hg19 HNSC TCGA-HD-7229 10 1 Out-of-frame Inter-chr p13.3 q32.33 30101 ChimerSeq STARFusion TCGA_RNA-Seq CDC34-IGH@ CDC34 chr19 541659 + IGH@ chr14 106111126 - Exonic hg19 HNSC TCGA-HD-7229 9 1 Out-of-frame Inter-chr p13.3 32.33 30102 ChimerSeq STARFusion TCGA_RNA-Seq CDC34-IGH@ CDC34 chr19 541659 + IGH@ chr14 106136181 - Exonic hg19 HNSC TCGA-HD-7229 8 1 Out-of-frame Inter-chr p13.3 32.33 30103 ChimerSeq STARFusion TCGA_RNA-Seq CHRM3-FMN2 CHRM3 chr1 239990678 + FMN2 chr1 240635672 + Exonic hg19 HNSC TCGA-HD-7229 4 16 5'UTR-CDS Intra-chr q43 q43 Seq+ 30104 ChimerSeq STARFusion TCGA_RNA-Seq GAPDH-KRT17 GAPDH chr12 6645919 + KRT17 chr17 39778724 - Exonic hg19 HNSC TCGA-HD-7229 3 8 Out-of-frame Inter-chr p13.31 q21.2 30105 ChimerSeq STARFusion TCGA_RNA-Seq TMEM117-KIF16B TMEM117 chr12 44338145 + KIF16B chr20 16293063 - Exonic hg19 HNSC TCGA-CQ-7072 4 24 Out-of-frame Inter-chr q12 p12.1 Seq+ 30106 ChimerSeq STARFusion TCGA_RNA-Seq TMEM117-KIF16B TMEM117 chr12 44537427 + KIF16B chr20 16293063 - Exonic hg19 HNSC TCGA-CQ-7072 3 24 In-Frame Inter-chr q12 p12.1 Seq+ 30107 ChimerSeq STARFusion TCGA_RNA-Seq VCL-ADK VCL chr10 75843271 + ADK chr10 76285014 + Exonic hg19 HNSC TCGA-CQ-7072 6 11 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 30108 ChimerSeq STARFusion TCGA_RNA-Seq RBM3-COL1A1 RBM3 chrX 48434090 + COL1A1 chr17 48264909 - Exonic hg19 HNSC TCGA-CQ-7072 5 2 Out-of-frame Inter-chr p11.23 q21.33 Oncogene 30109 ChimerSeq STARFusion TCGA_RNA-Seq GNA13-BMI1 GNA13 chr17 63049620 - BMI1 chr10 22617063 + Exonic hg19 HNSC TCGA-CV-7429 9 51 Out-of-frame Inter-chr q24.1 p12.2 Seq+ 30110 ChimerSeq STARFusion TCGA_RNA-Seq NFIX-RALGPS1 NFIX chr19 13136366 + RALGPS1 chr9 129928348 + Exonic hg19 HNSC TCGA-CV-7428 8 26 In-Frame Inter-chr p13.13 Transcription factor q33.3 Seq+ 30111 ChimerSeq STARFusion TCGA_RNA-Seq TMEM51-KAZN TMEM51 chr1 15480450 + KAZN chr1 15370485 + Exonic hg19 HNSC TCGA-CV-7428 7 15 5'UTR-CDS Intra-chr p36.21 p36.21 Seq+ 30112 ChimerSeq STARFusion TCGA_RNA-Seq SMU1-B4GALT1 SMU1 chr9 33068822 - B4GALT1 chr9 33104779 - Exonic hg19 HNSC TCGA-CV-7428 3 9 CDS-3'UTR Intra-chr p21.1 p21.1 Seq+ 30113 ChimerSeq STARFusion TCGA_RNA-Seq LYNX1-KRT5 LYNX1 chr8 143855734 - KRT5 chr12 52911018 - Exonic hg19 HNSC TCGA-CV-7427 3 6 Out-of-frame Inter-chr q24.3 q13.13 30114 ChimerSeq STARFusion TCGA_RNA-Seq CSTB-KRT5 CSTB chr21 45196098 - KRT5 chr12 52910437 - Exonic hg19 HNSC TCGA-CV-7425 3 26 Out-of-frame Inter-chr q22.3 q13.13 30115 ChimerSeq STARFusion TCGA_RNA-Seq RPL23-KRT5 RPL23 chr17 37008020 - KRT5 chr12 52913546 - Exonic hg19 HNSC TCGA-CV-7425 7 5 Out-of-frame Inter-chr q12 q13.13 30116 ChimerSeq STARFusion TCGA_RNA-Seq GJB2-EEF1A1 GJB2 chr13 20762930 - EEF1A1 chr6 74229667 - Exonic hg19 HNSC TCGA-CV-7425 3 6 Out-of-frame Inter-chr q12.11 Tumor suppressor gene q13 Tumor suppressor gene 30117 ChimerSeq STARFusion TCGA_RNA-Seq S100A9-KRT6A S100A9 chr1 153333207 + KRT6A chr12 52881888 - Exonic hg19 HNSC TCGA-CV-7423 3 56 Out-of-frame Inter-chr q21.3 q13.13 30118 ChimerSeq STARFusion TCGA_RNA-Seq CUL3-FAM124B CUL3 chr2 225422376 - FAM124B chr2 225244925 - Exonic hg19 HNSC TCGA-CV-7422 9 24 In-Frame Intra-chr q36.2 q36.2 30119 ChimerSeq STARFusion TCGA_RNA-Seq TRABD-DDR2 TRABD chr22 50624405 + DDR2 chr1 162625001 + Exonic hg19 HNSC TCGA-CV-7422 5 17 5'UTR-5'UTR Inter-chr q13.33 q23.3 TK:DDR Oncogene Tumor suppressor gene Seq+ 30120 ChimerSeq STARFusion TCGA_RNA-Seq TRABD-DDR2 TRABD chr22 50629077 + DDR2 chr1 162625001 + Exonic hg19 HNSC TCGA-CV-7422 2 17 5'UTR-5'UTR Inter-chr q13.33 q23.3 TK:DDR Oncogene Tumor suppressor gene Seq+ 30121 ChimerSeq STARFusion TCGA_RNA-Seq EWSR1-ABR EWSR1 chr22 29669853 + ABR chr17 1028702 - Exonic hg19 HNSC TCGA-CV-7421 26 81 In-Frame Inter-chr q12.2 p13.3 Seq+ 30122 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-DEFB117 TPX2 chr20 30347982 + DEFB117 chr20 29948576 + Exonic hg19 HNSC TCGA-CV-7421 19 34 Out-of-frame Intra-chr q11.21 q11.21 30123 ChimerSeq STARFusion TCGA_RNA-Seq VPS41-AES VPS41 chr7 38829401 - AES chr19 3054192 - Exonic hg19 HNSC TCGA-CV-7421 10 38 Out-of-frame Inter-chr p14.1 p13.3 Seq+ 30124 ChimerSeq STARFusion TCGA_RNA-Seq BCR-TOM1 BCR chr22 23524426 + TOM1 chr22 35723264 + Exonic hg19 HNSC TCGA-CV-7421 3 12 Out-of-frame Intra-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q12.3 Seq+ 30125 ChimerSeq STARFusion TCGA_RNA-Seq PLA2G6-SCARF2 PLA2G6 chr22 38538057 - SCARF2 chr22 20780307 - Exonic hg19 HNSC TCGA-CV-7421 4 7 Out-of-frame Intra-chr q13.1 q11.21 Seq+ 30126 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-DUSP15 TPX2 chr20 30347982 + DUSP15 chr20 30438479 - Exonic hg19 HNSC TCGA-CV-7421 2 14 CDS-3'UTR Intra-chr q11.21 q11.21 Seq+ 30127 ChimerSeq STARFusion TCGA_RNA-Seq COL17A1-NEURL COL17A1 chr10 105802178 - NEURL chr10 105330629 + Exonic hg19 HNSC TCGA-CV-7421 3 5 In-Frame Intra-chr q25.1 Tumor suppressor gene 30128 ChimerSeq STARFusion TCGA_RNA-Seq EIF2S1-ATP6V1D EIF2S1 chr14 67827173 + ATP6V1D chr14 67817407 - Exonic hg19 HNSC TCGA-CN-A49A 52 318 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 30129 ChimerSeq STARFusion TCGA_RNA-Seq STK39-NCKAP5 STK39 chr2 168869144 - NCKAP5 chr2 133489624 - Exonic hg19 HNSC TCGA-CN-A49A 8 35 In-Frame Intra-chr q24.3 q21.2 Seq+ 30130 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-TXN2 MYH9 chr22 36783852 - TXN2 chr22 36863964 - Exonic hg19 HNSC TCGA-CN-A49A 4 17 5'UTR-CDS Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Seq+ 30131 ChimerSeq STARFusion TCGA_RNA-Seq TP63-LEPREL1 TP63 chr3 189526315 + LEPREL1 chr3 189713231 - Exonic hg19 HNSC TCGA-CN-A49A 3 7 In-Frame Intra-chr q28 Tumor suppressor gene Transcription factor Seq+ 30132 ChimerSeq STARFusion TCGA_RNA-Seq LINC01033-SNX18 LINC01033 chr5 53697695 + SNX18 chr5 53839009 + Exonic hg19 HNSC TCGA-CN-A49A 2 7 Out-of-frame Intra-chr q11.2 q11.2 30133 ChimerSeq STARFusion TCGA_RNA-Seq MACROD1-TCN1 MACROD1 chr11 63918711 - TCN1 chr11 59622308 - Exonic hg19 HNSC TCGA-CN-A49C 116 481 In-Frame Intra-chr q13.1 q12.1 Seq+ 30134 ChimerSeq STARFusion TCGA_RNA-Seq CPT1A-P4HA3 CPT1A chr11 68549239 - P4HA3 chr11 74000175 - Exonic hg19 HNSC TCGA-CN-A49C 3 8 Out-of-frame Intra-chr q13.3 q13.4 Seq+ 30135 ChimerSeq STARFusion TCGA_RNA-Seq TULP4-FNDC1 TULP4 chr6 158919844 + FNDC1 chr6 159635977 + Exonic hg19 HNSC TCGA-UF-A719 9 29 In-Frame Intra-chr q25.3 q25.3 Seq+ 30136 ChimerSeq STARFusion TCGA_RNA-Seq PSAP-IGL@ PSAP chr10 73576603 - IGL@ chr22 23247170 + Exonic hg19 HNSC TCGA-MZ-A6I9 43 1 Out-of-frame Inter-chr q22.1 q11.22 30137 ChimerSeq STARFusion TCGA_RNA-Seq KPNA1-CCDC58 KPNA1 chr3 122215284 - CCDC58 chr3 122081874 - Exonic hg19 HNSC TCGA-MZ-A6I9 10 93 In-Frame Intra-chr q21.1 q21.1 Seq+ 30138 ChimerSeq STARFusion TCGA_RNA-Seq ASAP2-CPSF3 ASAP2 chr2 9463379 + CPSF3 chr2 9599660 + Exonic hg19 HNSC TCGA-MZ-A6I9 16 59 In-Frame Intra-chr p25.1 p25.1 Seq+ 30139 ChimerSeq STARFusion TCGA_RNA-Seq KPNA1-CCDC58 KPNA1 chr3 122215284 - CCDC58 chr3 122087169 - Exonic hg19 HNSC TCGA-MZ-A6I9 2 69 In-Frame Intra-chr q21.1 q21.1 Seq+ 30140 ChimerSeq STARFusion TCGA_RNA-Seq PSAP-IGL@ PSAP chr10 73576603 - IGL@ chr22 23241800 + Exonic hg19 HNSC TCGA-MZ-A6I9 15 1 Out-of-frame Inter-chr q22.1 q11.22 30141 ChimerSeq STARFusion TCGA_RNA-Seq RPH3AL-VPS53 RPH3AL chr17 131559 - VPS53 chr17 424978 - Exonic hg19 HNSC TCGA-MZ-A6I9 5 40 In-Frame Intra-chr Tumor suppressor gene 30142 ChimerSeq STARFusion TCGA_RNA-Seq ITGB5-IGL@ ITGB5 chr3 124485081 - IGL@ chr22 23248513 + Exonic hg19 HNSC TCGA-UF-A718 7 1 Out-of-frame Inter-chr q21.2 q11.22 30143 ChimerSeq STARFusion TCGA_RNA-Seq FAM49B-CCDC26 FAM49B chr8 130863081 - CCDC26 chr8 130411930 - Exonic hg19 HNSC TCGA-HD-7831 3 17 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 30144 ChimerSeq STARFusion TCGA_RNA-Seq RBM3-COL1A1 RBM3 chrX 48434090 + COL1A1 chr17 48264909 - Exonic hg19 HNSC TCGA-HD-7831 4 4 Out-of-frame Inter-chr p11.23 q21.33 Oncogene 30145 ChimerSeq STARFusion TCGA_RNA-Seq PTGES3-NACA PTGES3 chr12 57081782 - NACA chr12 57108471 - Exonic hg19 HNSC TCGA-HD-7832 187 715 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 30146 ChimerSeq STARFusion TCGA_RNA-Seq KRT14-GTPBP2 KRT14 chr17 39740509 - GTPBP2 chr6 43592994 - Exonic hg19 HNSC TCGA-MT-A67A 4 1 Out-of-frame Inter-chr q21.2 p21.1 30147 ChimerSeq STARFusion TCGA_RNA-Seq KIAA2026-PLGRKT KIAA2026 chr9 6007195 - PLGRKT chr9 5361187 - Exonic hg19 HNSC TCGA-CV-A45X 26 225 In-Frame Intra-chr p24.1 p24.1 Seq+ 30148 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-RBM4 PPFIA1 chr11 70118542 + RBM4 chr11 66407171 + Exonic hg19 HNSC TCGA-CV-A45X 8 48 5'UTR-5'UTR Intra-chr q13.3 q13.2 Tumor suppressor gene Seq+ 30149 ChimerSeq STARFusion TCGA_RNA-Seq VPS53-ABR VPS53 chr17 600658 - ABR chr17 1003975 - Exonic hg19 HNSC TCGA-CV-A45X 7 21 In-Frame Intra-chr Tumor suppressor gene p13.3 Seq+ 30150 ChimerSeq STARFusion TCGA_RNA-Seq KREMEN1-MAPK1 KREMEN1 chr22 29469215 + MAPK1 chr22 22123609 - Exonic hg19 HNSC TCGA-CV-A45X 3 4 Out-of-frame Intra-chr q12.1 q11.22 Oncogene Seq+ 30151 ChimerSeq STARFusion TCGA_RNA-Seq HERC2P2-ZNF438 HERC2P2 chr15 23356106 - ZNF438 chr10 31273355 - Exonic hg19 HNSC TCGA-CV-A45X 2 7 3'UTR-5'UTR Inter-chr q11.2 p11.23 Transcription factor 30152 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG3 STK25 chr2 242434915 - IGHG3 chr14 106237745 - Exonic hg19 HNSC TCGA-CV-A45Y 73 1 Out-of-frame Inter-chr q37.3 30153 ChimerSeq STARFusion TCGA_RNA-Seq LIMS1-IGL@ LIMS1 chr2 109276408 + IGL@ chr22 23247168 + Exonic hg19 HNSC TCGA-CV-A45Y 16 0 Out-of-frame Inter-chr q12.3 q11.22 30154 ChimerSeq STARFusion TCGA_RNA-Seq LIMS1-IGLJ3 LIMS1 chr2 109276408 + IGLJ3 chr22 23247168 + Exonic hg19 HNSC TCGA-CV-A45Y 16 0 Out-of-frame Inter-chr q12.3 q11.22 30155 ChimerSeq STARFusion TCGA_RNA-Seq LIMS1-IGLC3 LIMS1 chr2 109276408 + IGLC3 chr22 23247168 + Exonic hg19 HNSC TCGA-CV-A45Y 12 0 Out-of-frame Inter-chr q12.3 q11.22 30156 ChimerSeq STARFusion TCGA_RNA-Seq AGO1-IGKC AGO1 chr1 36383969 + IGKC chr2 89157198 - Exonic hg19 HNSC TCGA-CV-A45Y 7 1 Out-of-frame Inter-chr p34.3 p11.2 30157 ChimerSeq STARFusion TCGA_RNA-Seq CCDC57-IGKC CCDC57 chr17 80109582 - IGKC chr2 89161428 - Exonic hg19 HNSC TCGA-CV-A45Y 7 1 Out-of-frame Inter-chr q25.3 p11.2 30158 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB2-IGKC DNAJB2 chr2 220151425 + IGKC chr2 89156807 - Exonic hg19 HNSC TCGA-CV-A45Y 5 3 Out-of-frame Intra-chr q35 p11.2 30159 ChimerSeq STARFusion TCGA_RNA-Seq ARFGAP1-IGHG1 ARFGAP1 chr20 61909506 + IGHG1 chr14 106209407 - Exonic hg19 HNSC TCGA-CV-A45Y 4 2 Out-of-frame Inter-chr q13.33 q32.33 30160 ChimerSeq STARFusion TCGA_RNA-Seq CAPS2-KCNC2 CAPS2 chr12 75764859 - KCNC2 chr12 75445097 - Exonic hg19 HNSC TCGA-CV-A45Y 2 4 5'UTR-CDS Intra-chr q21.2 q21.1 Seq+ 30161 ChimerSeq STARFusion TCGA_RNA-Seq CD44-PDHX CD44 chr11 35201954 + PDHX chr11 35041755 + Exonic hg19 HNSC TCGA-CV-A45Z 32 202 CDS-3'UTR Intra-chr p13 Oncogene Tumor suppressor gene p13 Seq+ 30162 ChimerSeq STARFusion TCGA_RNA-Seq CD44-PDHX CD44 chr11 35201954 + PDHX chr11 35034274 + Exonic hg19 HNSC TCGA-CV-A45Z 9 201 CDS-3'UTR Intra-chr p13 Oncogene Tumor suppressor gene p13 Seq+ 30163 ChimerSeq STARFusion TCGA_RNA-Seq C4BPA-IGKC C4BPA chr1 207314564 + IGKC chr2 89161068 - Exonic hg19 HNSC TCGA-CV-A45Z 10 0 Out-of-frame Inter-chr q32.2 p11.2 30164 ChimerSeq STARFusion TCGA_RNA-Seq C4BPA-IGKJ2 C4BPA chr1 207314564 + IGKJ2 chr2 89161068 - Exonic hg19 HNSC TCGA-CV-A45Z 10 0 Out-of-frame Inter-chr q32.2 p11.2 30165 ChimerSeq STARFusion TCGA_RNA-Seq THRAP3-AGO3 THRAP3 chr1 36725085 + AGO3 chr1 36469942 + Exonic hg19 HNSC TCGA-CV-A45Z 4 8 Out-of-frame Intra-chr p34.3 p34.3 30166 ChimerSeq STARFusion TCGA_RNA-Seq SEC14L5-IGH@ SEC14L5 chr16 5066610 + IGH@ chr14 106330467 - Exonic hg19 HNSC TCGA-CV-A45T 18 1 Out-of-frame Inter-chr p13.3 32.33 30167 ChimerSeq STARFusion TCGA_RNA-Seq SEC23B-ZCCHC7 SEC23B chr20 18506576 + ZCCHC7 chr9 37349354 + Exonic hg19 HNSC TCGA-CV-A45T 8 26 In-Frame Inter-chr p11.23 p13.2 Seq+ 30168 ChimerSeq STARFusion TCGA_RNA-Seq S100A9-KRT17 S100A9 chr1 153333413 + KRT17 chr17 39780390 - Exonic hg19 HNSC TCGA-CV-A45T 6 31 Out-of-frame Inter-chr q21.3 q21.2 30169 ChimerSeq STARFusion TCGA_RNA-Seq SEC14L5-IGH@ SEC14L5 chr16 5066622 + IGH@ chr14 106330054 - Exonic hg19 HNSC TCGA-CV-A45T 4 9 Out-of-frame Inter-chr p13.3 32.33 30170 ChimerSeq STARFusion TCGA_RNA-Seq DENND1A-ENG DENND1A chr9 126319849 - ENG chr9 130581111 - Exonic hg19 HNSC TCGA-CV-A45T 3 8 In-Frame Intra-chr q33.3 q34.11 Seq+ 30171 ChimerSeq STARFusion TCGA_RNA-Seq SEC14L5-IGH@ SEC14L5 chr16 5066613 + IGH@ chr14 106330063 - Exonic hg19 HNSC TCGA-CV-A45T 3 4 Out-of-frame Inter-chr p13.3 32.33 30172 ChimerSeq STARFusion TCGA_RNA-Seq C11orf68-DRAP1 C11orf68 chr11 65686513 - DRAP1 chr11 65687490 + Exonic hg19 HNSC TCGA-CV-A45U 22 32 Out-of-frame Intra-chr q13.1 q13.1 Transcription factor Seq+ 30173 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0391-FAM177A1 KIAA0391 chr14 35649983 + FAM177A1 chr14 35546356 + Exonic hg19 HNSC TCGA-CV-A45U 11 40 In-Frame Intra-chr q13.2 q13.2 Seq+ 30174 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0391-FAM177A1 KIAA0391 chr14 35649983 + FAM177A1 chr14 35546356 + Exonic hg19 HNSC TCGA-CV-A45U 11 39 In-Frame Intra-chr q13.2 q13.2 Seq+ 30175 ChimerSeq STARFusion TCGA_RNA-Seq KRT6B-FTSJ3 KRT6B chr12 52844316 - FTSJ3 chr17 61907258 - Exonic hg19 HNSC TCGA-CV-A45U 5 3 Out-of-frame Inter-chr q13.13 q23.3 30176 ChimerSeq STARFusion TCGA_RNA-Seq PLXDC2-KRT5 PLXDC2 chr10 20105754 + KRT5 chr12 52911462 - Exonic hg19 HNSC TCGA-CV-A45V 6 2 Out-of-frame Inter-chr p12.31 q13.13 30177 ChimerSeq STARFusion TCGA_RNA-Seq TRAF2-IGHG3 TRAF2 chr9 139780711 + IGHG3 chr14 106330058 - Exonic hg19 HNSC TCGA-CV-A45W 24 1 Out-of-frame Inter-chr q34.3 Tumor suppressor gene 30178 ChimerSeq STARFusion TCGA_RNA-Seq C14orf2-BRF1 C14orf2 chr14 104387807 - BRF1 chr14 105718916 - Exonic hg19 HNSC TCGA-CV-A45W 14 33 5'UTR-CDS Intra-chr q32.33 q32.33 Tumor suppressor gene Seq+ 30179 ChimerSeq STARFusion TCGA_RNA-Seq LINC01039-IGKC LINC01039 chr13 100229487 + IGKC chr2 89161067 - Exonic hg19 HNSC TCGA-CV-A45W 18 0 Out-of-frame Inter-chr q32.3 p11.2 30180 ChimerSeq STARFusion TCGA_RNA-Seq LINC01039-IGKJ2 LINC01039 chr13 100229487 + IGKJ2 chr2 89161067 - Exonic hg19 HNSC TCGA-CV-A45W 18 0 Out-of-frame Inter-chr q32.3 p11.2 30181 ChimerSeq STARFusion TCGA_RNA-Seq ENDOG-IGHG3 ENDOG chr9 131580787 + IGHG3 chr14 106330073 - Exonic hg19 HNSC TCGA-CV-A45W 16 1 Out-of-frame Inter-chr q34.11 30182 ChimerSeq STARFusion TCGA_RNA-Seq C14orf2-BRF1 C14orf2 chr14 104387807 - BRF1 chr14 105707751 - Exonic hg19 HNSC TCGA-CV-A45W 3 32 5'UTR-5'UTR Intra-chr q32.33 q32.33 Tumor suppressor gene Seq+ 30183 ChimerSeq STARFusion TCGA_RNA-Seq TYRO3-IGHJ4 TYRO3 chr15 41854870 + IGHJ4 chr14 106330475 - Exonic hg19 HNSC TCGA-CV-A45W 10 1 Out-of-frame Inter-chr q15.1 TK:Axl 30184 ChimerSeq STARFusion TCGA_RNA-Seq CYHR1-IGKC CYHR1 chr8 145689456 - IGKC chr2 89160429 - Exonic hg19 HNSC TCGA-CV-A45W 9 1 Out-of-frame Inter-chr q24.3 p11.2 30185 ChimerSeq STARFusion TCGA_RNA-Seq CYHR1-IGKJ4 CYHR1 chr8 145689456 - IGKJ4 chr2 89160429 - Exonic hg19 HNSC TCGA-CV-A45W 9 1 Out-of-frame Inter-chr q24.3 p11.2 30186 ChimerSeq STARFusion TCGA_RNA-Seq ITGB5-IGL@ ITGB5 chr3 124485081 - IGL@ chr22 23248513 + Exonic hg19 HNSC TCGA-CV-A45W 7 1 Out-of-frame Inter-chr q21.2 q11.22 30187 ChimerSeq STARFusion TCGA_RNA-Seq CYHR1-IGKJ4 CYHR1 chr8 145689460 - IGKJ4 chr2 89161433 - Exonic hg19 HNSC TCGA-CV-A45W 6 1 Out-of-frame Inter-chr q24.3 p11.2 30188 ChimerSeq STARFusion TCGA_RNA-Seq HCFC1-IGHG2 HCFC1 chrX 153222122 - IGHG2 chr14 106111130 - Exonic hg19 HNSC TCGA-CV-A45W 6 1 Out-of-frame Inter-chr q28 30189 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHG1 SLC7A5 chr16 87868137 - IGHG1 chr14 106237745 - Exonic hg19 HNSC TCGA-CV-A45W 6 1 Out-of-frame Inter-chr q24.2 q32.33 30190 ChimerSeq STARFusion TCGA_RNA-Seq IGHGP-FBN3 IGHGP chr14 106134592 - FBN3 chr19 8138054 - Exonic hg19 HNSC TCGA-CV-A45W 5 1 Out-of-frame Inter-chr p13.2 30191 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-GRN IGHG1 chr14 106209181 - GRN chr17 42429748 + Exonic hg19 HNSC TCGA-CV-A45W 3 3 Out-of-frame Inter-chr q32.33 q21.31 30192 ChimerSeq STARFusion TCGA_RNA-Seq S100A9-KRT17 S100A9 chr1 153333413 + KRT17 chr17 39780390 - Exonic hg19 HNSC TCGA-CV-A45P 13 103 Out-of-frame Inter-chr q21.3 q21.2 30193 ChimerSeq STARFusion TCGA_RNA-Seq REV1-TMEM131 REV1 chr2 100106279 - TMEM131 chr2 98392481 - Exonic hg19 HNSC TCGA-CV-A45R 2 7 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 30194 ChimerSeq STARFusion TCGA_RNA-Seq TRIM4-IGH@ TRIM4 chr7 99517035 - IGH@ chr14 106174999 - Exonic hg19 HNSC TCGA-CN-A497 6 1 Out-of-frame Inter-chr q22.1 32.33 30195 ChimerSeq STARFusion TCGA_RNA-Seq PSAP-IGKC PSAP chr10 73578904 - IGKC chr2 89161433 - Exonic hg19 HNSC TCGA-CN-A498 24 2 Out-of-frame Inter-chr q22.1 p11.2 30196 ChimerSeq STARFusion TCGA_RNA-Seq UBE2G1-ANKFY1 UBE2G1 chr17 4269566 - ANKFY1 chr17 4100872 - Exonic hg19 HNSC TCGA-CN-A498 2 68 In-Frame Intra-chr p13.2 p13.2 Seq+ 30197 ChimerSeq STARFusion TCGA_RNA-Seq S100A9-KRT17 S100A9 chr1 153333416 + KRT17 chr17 39780387 - Exonic hg19 HNSC TCGA-CN-A498 6 27 Out-of-frame Inter-chr q21.3 q21.2 30198 ChimerSeq STARFusion TCGA_RNA-Seq KRT14-KCNN3 KRT14 chr17 39742836 - KCNN3 chr1 154842242 - Exonic hg19 HNSC TCGA-CN-A498 8 1 Out-of-frame Inter-chr q21.2 q21.3 30199 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH1-MAPK1 NOTCH1 chr9 139405604 - MAPK1 chr22 22143097 - Exonic hg19 HNSC TCGA-CN-A498 3 12 Out-of-frame Inter-chr q34.3 Oncogene Tumor suppressor gene q11.22 Oncogene Seq+ 30200 ChimerSeq STARFusion TCGA_RNA-Seq VCL-SFXN2 VCL chr10 75802911 + SFXN2 chr10 104486369 + Exonic hg19 HNSC TCGA-CN-A499 2 7 CDS-5'UTR Intra-chr q22.2 q24.32 Seq+ 30201 ChimerSeq STARFusion TCGA_RNA-Seq NCKAP1-PARD3 NCKAP1 chr2 183888534 - PARD3 chr10 34985347 - Exonic hg19 HNSC TCGA-CN-4742 29 116 In-Frame Inter-chr q32.1 p11.21 Seq+ 30202 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106209410 - Exonic hg19 HNSC TCGA-CN-4742 12 4 Out-of-frame Inter-chr q24.2 32.33 30203 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHG1 SLC7A5 chr16 87868137 - IGHG1 chr14 106209410 - Exonic hg19 HNSC TCGA-CN-4742 12 1 Out-of-frame Inter-chr q24.2 q32.33 30204 ChimerSeq STARFusion TCGA_RNA-Seq GPBP1L1-PRDX1 GPBP1L1 chr1 46151248 - PRDX1 chr1 45984726 - Exonic hg19 HNSC TCGA-CN-4742 2 25 5'UTR-5'UTR Intra-chr p34.1 Transcription factor p34.1 30205 ChimerSeq STARFusion TCGA_RNA-Seq GAPDH-KRT6A GAPDH chr12 6647463 + KRT6A chr12 52886936 - Exonic hg19 HNSC TCGA-CN-4742 3 17 Out-of-frame Intra-chr p13.31 q13.13 30206 ChimerSeq STARFusion TCGA_RNA-Seq ELMSAN1-ANO1 ELMSAN1 chr14 74196343 - ANO1 chr11 69957813 + Exonic hg19 HNSC TCGA-CN-4742 3 11 Out-of-frame Inter-chr q24.3 q13.3 Seq+ 30207 ChimerSeq STARFusion TCGA_RNA-Seq ELMSAN1-ANO1 ELMSAN1 chr14 74194161 - ANO1 chr11 69957813 + Exonic hg19 HNSC TCGA-CN-4742 2 11 Out-of-frame Inter-chr q24.3 q13.3 Seq+ 30208 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242532 + KRT14 chr17 39768618 - Exonic hg19 HNSC TCGA-CN-4742 3 6 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 30209 ChimerSeq STARFusion TCGA_RNA-Seq PIP5K1C-MATK PIP5K1C chr19 3700295 - MATK chr19 3781670 - Exonic hg19 HNSC TCGA-CN-4741 7 27 In-Frame Intra-chr p13.3 p13.3 Seq+ 30210 ChimerSeq STARFusion TCGA_RNA-Seq PIP5K1C-MATK PIP5K1C chr19 3700295 - MATK chr19 3779795 - Exonic hg19 HNSC TCGA-CN-4741 2 27 In-Frame Intra-chr p13.3 p13.3 Seq+ 30211 ChimerSeq STARFusion TCGA_RNA-Seq RMND5A-IGKC RMND5A chr2 86968140 + IGKC chr2 89161075 - Exonic hg19 HNSC TCGA-CN-4740 42 1 Out-of-frame Intra-chr p11.2 p11.2 30212 ChimerSeq STARFusion TCGA_RNA-Seq BAIAP2L2-PLA2G6 BAIAP2L2 chr22 38506482 - PLA2G6 chr22 38516916 - Exonic hg19 HNSC TCGA-CN-4740 3 80 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 30213 ChimerSeq STARFusion TCGA_RNA-Seq PLA2G4E-IGKC PLA2G4E chr15 42274286 - IGKC chr2 89161069 - Exonic hg19 HNSC TCGA-CN-4740 23 0 Out-of-frame Inter-chr q15.1 p11.2 30214 ChimerSeq STARFusion TCGA_RNA-Seq PLA2G4E-IGKJ2 PLA2G4E chr15 42274286 - IGKJ2 chr2 89161069 - Exonic hg19 HNSC TCGA-CN-4740 23 0 Out-of-frame Inter-chr q15.1 p11.2 30215 ChimerSeq STARFusion TCGA_RNA-Seq BCL2L11-MERTK BCL2L11 chr2 111907724 + MERTK chr2 112751828 + Exonic hg19 HNSC TCGA-DQ-7594 13 52 In-Frame Intra-chr q13 Tumor suppressor gene q13 Seq+ 30216 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L2-RFTN2 NFE2L2 chr2 178129260 - RFTN2 chr2 198437004 - Exonic hg19 HNSC TCGA-DQ-7594 8 39 In-Frame Intra-chr q31.2 Oncogene Transcription factor q33.1 Seq+ 30217 ChimerSeq STARFusion TCGA_RNA-Seq DST-IGKC DST chr6 56327852 - IGKC chr2 89160428 - Exonic hg19 HNSC TCGA-DQ-7594 10 1 Out-of-frame Inter-chr p12.1 Oncogene p11.2 30218 ChimerSeq STARFusion TCGA_RNA-Seq DST-IGKJ1 DST chr6 56327852 - IGKJ1 chr2 89161428 - Exonic hg19 HNSC TCGA-DQ-7594 10 1 Out-of-frame Inter-chr p12.1 Oncogene p11.2 30219 ChimerSeq STARFusion TCGA_RNA-Seq DST-IGKJ4 DST chr6 56327852 - IGKJ4 chr2 89160428 - Exonic hg19 HNSC TCGA-DQ-7594 10 1 Out-of-frame Inter-chr p12.1 Oncogene p11.2 30220 ChimerSeq STARFusion TCGA_RNA-Seq AGPS-MOB4 AGPS chr2 178378636 + MOB4 chr2 198404835 + Exonic hg19 HNSC TCGA-DQ-7594 4 7 In-Frame Intra-chr q31.2 q33.1 Seq+ 30221 ChimerSeq STARFusion TCGA_RNA-Seq KPNA6-RHCE KPNA6 chr1 32573735 + RHCE chr1 25697031 - Exonic hg19 HNSC TCGA-DQ-7591 71 148 In-Frame Intra-chr p35.2 p36.11 Seq+ 30222 ChimerSeq STARFusion TCGA_RNA-Seq NLE1-FNDC8 NLE1 chr17 33466254 - FNDC8 chr17 33454061 + Exonic hg19 HNSC TCGA-DQ-7591 17 64 Out-of-frame Intra-chr q12 q12 Seq+ 30223 ChimerSeq STARFusion TCGA_RNA-Seq NLE1-FNDC8 NLE1 chr17 33466254 - FNDC8 chr17 33454186 + Exonic hg19 HNSC TCGA-DQ-7591 4 64 Out-of-frame Intra-chr q12 q12 Seq+ 30224 ChimerSeq STARFusion TCGA_RNA-Seq WDTC1-TMEM39B WDTC1 chr1 27561442 + TMEM39B chr1 32540552 + Exonic hg19 HNSC TCGA-DQ-7591 6 52 5'UTR-CDS Intra-chr p36.11 p35.2 Seq+ 30225 ChimerSeq STARFusion TCGA_RNA-Seq MAD1L1-SERGEF MAD1L1 chr7 2188787 - SERGEF chr11 17809960 - Exonic hg19 HNSC TCGA-DQ-7591 9 23 Out-of-frame Inter-chr p22.3 Tumor suppressor gene p15.1 Seq+ 30226 ChimerSeq STARFusion TCGA_RNA-Seq ERC1-ENPP7P13 ERC1 chr12 1250953 + ENPP7P13 chr16 33571838 + Exonic hg19 HNSC TCGA-DQ-7591 5 24 Out-of-frame Inter-chr p11.2 30227 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106111129 - Exonic hg19 HNSC TCGA-DQ-7591 8 1 Out-of-frame Inter-chr q37.3 30228 ChimerSeq STARFusion TCGA_RNA-Seq PARD6G-CHST1 PARD6G chr18 77960593 - CHST1 chr11 45674156 - Exonic hg19 HNSC TCGA-DQ-7591 2 22 CDS-5'UTR Inter-chr q23 p11.2 Seq+ 30229 ChimerSeq STARFusion TCGA_RNA-Seq PLCXD1-IGHG3 PLCXD1 chrX 209756 + IGHG3 chr14 106237745 - Exonic hg19 HNSC TCGA-DQ-7591 6 1 Out-of-frame Inter-chr p22.33 30230 ChimerSeq STARFusion TCGA_RNA-Seq KIF3B-NINL KIF3B chr20 30904677 + NINL chr20 25507234 - Exonic hg19 HNSC TCGA-DQ-7591 4 7 CDS-5'UTR Intra-chr q11.21 p11.21 Seq+ 30231 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC8-C1orf172 DNAJC8 chr1 28559432 - C1orf172 chr1 27278903 - Exonic hg19 HNSC TCGA-DQ-7591 3 9 CDS-5'UTR Intra-chr p35.3 Seq+ 30232 ChimerSeq STARFusion TCGA_RNA-Seq CS-MUCL1 CS chr12 56685415 - MUCL1 chr12 55251977 + Exonic hg19 HNSC TCGA-DQ-7591 3 6 Out-of-frame Intra-chr q13.3 q13.2 Seq+ 30233 ChimerSeq STARFusion TCGA_RNA-Seq PITX1-P4HA2 PITX1 chr5 134369403 - P4HA2 chr5 131554337 - Exonic hg19 HNSC TCGA-DQ-7590 10 27 CDS-5'UTR Intra-chr q31.1 Transcription factor q31.1 Seq+ 30234 ChimerSeq STARFusion TCGA_RNA-Seq STIP1-UBE2G1 STIP1 chr11 63953742 + UBE2G1 chr17 4210418 - Exonic hg19 HNSC TCGA-D6-A74Q 16 45 Out-of-frame Inter-chr q13.1 p13.2 Seq+ 30235 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 HNSC TCGA-D6-A74Q 9 4 In-Frame Intra-chr p13.3 p13.3 30236 ChimerSeq STARFusion TCGA_RNA-Seq DHTKD1-CDC123 DHTKD1 chr10 12111186 + CDC123 chr10 12272947 + Exonic hg19 HNSC TCGA-DQ-7592 13 65 Out-of-frame Intra-chr p14 p14 Seq+ 30237 ChimerSeq STARFusion TCGA_RNA-Seq KRT6A-RNF44 KRT6A chr12 52841326 - RNF44 chr5 175959208 - Exonic hg19 HNSC TCGA-DQ-7592 11 1 Out-of-frame Inter-chr q13.13 q35.2 30238 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-LEMD3 FRS2 chr12 69864310 + LEMD3 chr12 65604706 + Exonic hg19 HNSC TCGA-DQ-7592 2 25 5'UTR-CDS Intra-chr q15 q14.3 Seq+ 30239 ChimerSeq STARFusion TCGA_RNA-Seq MOB3A-STK11 MOB3A chr19 2076810 - STK11 chr19 1216267 + Exonic hg19 HNSC TCGA-CN-A642 14 71 Out-of-frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Seq+ 30240 ChimerSeq STARFusion TCGA_RNA-Seq MOB3A-STK11 MOB3A chr19 2076810 - STK11 chr19 1218416 + Exonic hg19 HNSC TCGA-CN-A642 6 70 Out-of-frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Seq+ 30241 ChimerSeq STARFusion TCGA_RNA-Seq PTBP3-SUSD1 PTBP3 chr9 115013209 - SUSD1 chr9 114842445 - Exonic hg19 HNSC TCGA-CN-A642 2 17 In-Frame Intra-chr q32 q32 30242 ChimerSeq STARFusion TCGA_RNA-Seq ESYT2-ZNF595 ESYT2 chr7 158590633 - ZNF595 chr4 59323 + Exonic hg19 HNSC TCGA-QK-A8ZA 9 25 Out-of-frame Inter-chr q36.3 p16.3 Transcription factor Seq+ 30243 ChimerSeq STARFusion TCGA_RNA-Seq ATP11A-CARKD ATP11A chr13 113344769 + CARKD chr13 111274563 + Exonic hg19 HNSC TCGA-QK-A8ZA 8 18 Out-of-frame Intra-chr q34 Seq+ 30244 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2B-UHRF2 PRRC2B chr9 134269650 + UHRF2 chr9 6504593 + Exonic hg19 HNSC TCGA-QK-A8ZA 4 12 5'UTR-5'UTR Intra-chr q34.13 p24.1 Tumor suppressor gene Seq+ 30245 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2B-UHRF2 PRRC2B chr9 134269650 + UHRF2 chr9 6481992 + Exonic hg19 HNSC TCGA-QK-A8ZA 2 12 5'UTR-5'UTR Intra-chr q34.13 p24.1 Tumor suppressor gene Seq+ 30246 ChimerSeq STARFusion TCGA_RNA-Seq HEBP1-NCK1 HEBP1 chr12 13140086 - NCK1 chr3 136667101 + Exonic hg19 HNSC TCGA-QK-A8ZB 35 189 Out-of-frame Inter-chr p13.1 q22.3 Seq+ 30247 ChimerSeq STARFusion TCGA_RNA-Seq NCK1-HEBP1 NCK1 chr3 136665137 + HEBP1 chr12 13128413 - Exonic hg19 HNSC TCGA-QK-A8ZB 44 96 Out-of-frame Inter-chr q22.3 p13.1 Seq+ 30248 ChimerSeq STARFusion TCGA_RNA-Seq IL20RB-HEBP1 IL20RB chr3 136665137 + HEBP1 chr12 13128413 - Exonic hg19 HNSC TCGA-QK-A8ZB 44 54 5'UTR-CDS Inter-chr q22.3 p13.1 Seq+ 30249 ChimerSeq STARFusion TCGA_RNA-Seq PDIA6-DKK3 PDIA6 chr2 10952804 - DKK3 chr11 11990034 - Exonic hg19 HNSC TCGA-QK-A8ZB 23 48 Out-of-frame Inter-chr p25.1 p15.3 Tumor suppressor gene Seq+ 30250 ChimerSeq STARFusion TCGA_RNA-Seq NRBP1-IGHG3 NRBP1 chr2 27664676 + IGHG3 chr14 106237743 - Exonic hg19 HNSC TCGA-QK-A8ZB 17 1 Out-of-frame Inter-chr p23.3 Other:NRBP Tumor suppressor gene 30251 ChimerSeq STARFusion TCGA_RNA-Seq BRWD3-FAM155A BRWD3 chrX 80047353 - FAM155A chr13 107823134 - Exonic hg19 HNSC TCGA-QK-A8ZB 6 39 In-Frame Inter-chr q21.1 q33.3 Seq+ 30252 ChimerSeq STARFusion TCGA_RNA-Seq CTHRC1-IGH@ CTHRC1 chr8 104383857 + IGH@ chr14 106136174 - Exonic hg19 HNSC TCGA-D6-A4ZB 18 1 Out-of-frame Inter-chr q22.3 32.33 30253 ChimerSeq STARFusion TCGA_RNA-Seq FAM126B-IGKC FAM126B chr2 201846438 - IGKC chr2 89161425 - Exonic hg19 HNSC TCGA-D6-A4ZB 8 4 Out-of-frame Intra-chr q33.1 p11.2 30254 ChimerSeq STARFusion TCGA_RNA-Seq CTHRC1-IGH@ CTHRC1 chr8 104383857 + IGH@ chr14 106237735 - Exonic hg19 HNSC TCGA-D6-A4ZB 7 1 Out-of-frame Inter-chr q22.3 32.33 30255 ChimerSeq STARFusion TCGA_RNA-Seq RPTOR-IGKC RPTOR chr17 78857752 + IGKC chr2 89160435 - Exonic hg19 HNSC TCGA-D6-A4ZB 7 1 Out-of-frame Inter-chr q25.3 p11.2 30256 ChimerSeq STARFusion TCGA_RNA-Seq COASY-IGHA1 COASY chr17 40714610 + IGHA1 chr14 106175002 - Exonic hg19 HNSC TCGA-D6-A4ZB 6 1 Out-of-frame Inter-chr q21.2 30257 ChimerSeq STARFusion TCGA_RNA-Seq KRT6A-FTSJ3 KRT6A chr12 52885432 - FTSJ3 chr17 61907258 - Exonic hg19 HNSC TCGA-D6-A4ZB 5 1 Out-of-frame Inter-chr q13.13 q23.3 30258 ChimerSeq STARFusion TCGA_RNA-Seq FAM126B-IGKC FAM126B chr2 201846433 - IGKC chr2 89160420 - Exonic hg19 HNSC TCGA-D6-A4ZB 4 4 Out-of-frame Intra-chr q33.1 p11.2 30259 ChimerSeq STARFusion TCGA_RNA-Seq PRMT2-WRB PRMT2 chr21 48069651 + WRB chr21 40762624 + Exonic hg19 HNSC TCGA-D6-A4ZB 3 8 In-Frame Intra-chr q22.3 q22.2 Seq+ 30260 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGH@ INTS1 chr7 1511981 - IGH@ chr14 106209410 - Exonic hg19 HNSC TCGA-D6-A4ZB 4 2 Out-of-frame Inter-chr p22.3 32.33 30261 ChimerSeq STARFusion TCGA_RNA-Seq C1S-PTPRO C1S chr12 7170371 + PTPRO chr12 15563214 + Exonic hg19 HNSC TCGA-D6-A4ZB 3 5 CDS-5'UTR Intra-chr p13.31 p12.3 Seq+ 30262 ChimerSeq STARFusion TCGA_RNA-Seq SCAPER-C15orf27 SCAPER chr15 76696865 - C15orf27 chr15 76426509 + Exonic hg19 HNSC TCGA-D6-A4ZB 2 5 CDS-5'UTR Intra-chr q24.3 Seq+ 30263 ChimerSeq STARFusion TCGA_RNA-Seq JUP-LEPREL4 JUP chr17 39920965 - LEPREL4 chr17 39959683 - Exonic hg19 HNSC TCGA-CN-5359 136 747 In-Frame Intra-chr q21.2 Tumor suppressor gene 30264 ChimerSeq STARFusion TCGA_RNA-Seq SNTB2-TANGO6 SNTB2 chr16 69221649 + TANGO6 chr16 69056731 + Exonic hg19 HNSC TCGA-CN-5359 10 32 Out-of-frame Intra-chr q22.1 30265 ChimerSeq STARFusion TCGA_RNA-Seq STT3B-RPL21P40 STT3B chr3 31667619 + RPL21P40 chr3 32071660 + Exonic hg19 HNSC TCGA-CN-5359 5 41 Out-of-frame Intra-chr p23 p22.3 30266 ChimerSeq STARFusion TCGA_RNA-Seq NEDD4L-CDH19 NEDD4L chr18 55833093 + CDH19 chr18 64292578 - Exonic hg19 HNSC TCGA-CN-5359 4 28 5'UTR-5'UTR Intra-chr q21.31 Tumor suppressor gene q22.1 Seq+ 30267 ChimerSeq STARFusion TCGA_RNA-Seq NEDD4L-CDH19 NEDD4L chr18 55833093 + CDH19 chr18 64239553 - Exonic hg19 HNSC TCGA-CN-5359 2 27 5'UTR-5'UTR Intra-chr q21.31 Tumor suppressor gene q22.1 Seq+ 30268 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-OS9 TSFM chr12 58186856 + OS9 chr12 58089745 + Exonic hg19 HNSC TCGA-CN-5359 5 4 In-Frame Intra-chr q14.1 q13.3 Seq+ 30269 ChimerSeq STARFusion TCGA_RNA-Seq LAMB1-ATXN7L1 LAMB1 chr7 107626467 - ATXN7L1 chr7 105401909 - Exonic hg19 HNSC TCGA-CN-5359 2 12 In-Frame Intra-chr q31.1 q22.3 Seq+ 30270 ChimerSeq STARFusion TCGA_RNA-Seq NAV2-USB1 NAV2 chr11 20142987 + USB1 chr16 58054466 + Exonic hg19 HNSC TCGA-BA-5149 13 0 Out-of-frame Inter-chr p15.1 q21 30271 ChimerSeq STARFusion TCGA_RNA-Seq SUPT16H-DDX11L1 SUPT16H chr14 21852021 - DDX11L1 chr1 12010 + Exonic hg19 HNSC TCGA-BA-5149 2 16 CDS-3'UTR Inter-chr q11.2 p36.33 30272 ChimerSeq STARFusion TCGA_RNA-Seq DYRK1A-IFNGR2 DYRK1A chr21 38739930 + IFNGR2 chr21 34793787 + Exonic hg19 HNSC TCGA-D6-A4Z9 10 15 5'UTR-CDS Intra-chr q22.13 CMGC:DYRK Seq+ 30273 ChimerSeq STARFusion TCGA_RNA-Seq DIP2A-NRIP1 DIP2A chr21 47929289 + NRIP1 chr21 16340847 - Exonic hg19 HNSC TCGA-D6-A4Z9 3 12 CDS-5'UTR Intra-chr q22.3 q21.1 Seq+ 30274 ChimerSeq STARFusion TCGA_RNA-Seq TMEM165-KIAA1211 TMEM165 chr4 56290810 + KIAA1211 chr4 57138487 + Exonic hg19 HNSC TCGA-QK-A8Z8 19 45 CDS-5'UTR Intra-chr q12 q12 Seq+ 30275 ChimerSeq STARFusion TCGA_RNA-Seq SP140L-PDE6D SP140L chr2 231256944 + PDE6D chr2 232603912 - Exonic hg19 HNSC TCGA-QK-A8Z9 10 33 Out-of-frame Intra-chr q37.1 Transcription factor q37.1 Seq+ 30276 ChimerSeq STARFusion TCGA_RNA-Seq AMOTL1-KIAA1731 AMOTL1 chr11 94462221 + KIAA1731 chr11 93454478 + Exonic hg19 HNSC TCGA-QK-A8Z9 6 27 5'UTR-CDS Intra-chr q21 Seq+ 30277 ChimerSeq STARFusion TCGA_RNA-Seq SP140L-PDE6D SP140L chr2 231253348 + PDE6D chr2 232603912 - Exonic hg19 HNSC TCGA-QK-A8Z9 2 25 Out-of-frame Intra-chr q37.1 Transcription factor q37.1 Seq+ 30278 ChimerSeq STARFusion TCGA_RNA-Seq ASXL2-DTNB ASXL2 chr2 26022254 - DTNB chr2 25819109 - Exonic hg19 HNSC TCGA-QK-A8Z9 4 7 In-Frame Intra-chr p23.3 p23.3 30279 ChimerSeq STARFusion TCGA_RNA-Seq CREB3-TLN1 CREB3 chr9 35733482 + TLN1 chr9 35711789 - Exonic hg19 HNSC TCGA-QK-A64Z 220 672 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 30280 ChimerSeq STARFusion TCGA_RNA-Seq TLN1-CREB3 TLN1 chr9 35732072 - CREB3 chr9 35732993 + Exonic hg19 HNSC TCGA-QK-A64Z 33 13 5'UTR-CDS Intra-chr p13.3 p13.3 Transcription factor Seq+ 30281 ChimerSeq STARFusion TCGA_RNA-Seq TRA2B-HRH4 TRA2B chr3 185655613 - HRH4 chr18 22048752 + Exonic hg19 HNSC TCGA-QK-A64Z 7 27 Out-of-frame Inter-chr q27.2 q11.2 Seq+ 30282 ChimerSeq STARFusion TCGA_RNA-Seq TRA2B-HRH4 TRA2B chr3 185655613 - HRH4 chr18 22056711 + Exonic hg19 HNSC TCGA-QK-A64Z 2 27 In-Frame Inter-chr q27.2 q11.2 Seq+ 30283 ChimerSeq STARFusion TCGA_RNA-Seq TMEM241-RIOK3 TMEM241 chr18 20964954 - RIOK3 chr18 21046097 + Exonic hg19 HNSC TCGA-QK-A64Z 5 12 In-Frame Intra-chr q11.2 q11.2 Atypical:RIO Seq+ 30284 ChimerSeq STARFusion TCGA_RNA-Seq YEATS2-HTR3C YEATS2 chr3 183480067 + HTR3C chr3 183773100 + Exonic hg19 HNSC TCGA-QK-A64Z 5 8 In-Frame Intra-chr q27.1 q27.1 Seq+ 30285 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG3 STK25 chr2 242434915 - IGHG3 chr14 106237745 - Exonic hg19 HNSC TCGA-QK-A8Z7 27 1 Out-of-frame Inter-chr q37.3 30286 ChimerSeq STARFusion TCGA_RNA-Seq JUP-NT5C3B JUP chr17 39914967 - NT5C3B chr17 39981909 - Exonic hg19 HNSC TCGA-QK-A8Z7 5 82 Out-of-frame Intra-chr q21.2 Tumor suppressor gene q21.2 Seq+ 30287 ChimerSeq STARFusion TCGA_RNA-Seq FOXA3-RGS6 FOXA3 chr19 46367783 + RGS6 chr14 72921236 + Exonic hg19 HNSC TCGA-QK-A8Z7 4 5 Out-of-frame Inter-chr q13.32 Transcription factor q24.2 Seq+ 30288 ChimerSeq STARFusion TCGA_RNA-Seq LAMB1-PUS7 LAMB1 chr7 107626467 - PUS7 chr7 105098373 - Exonic hg19 HNSC TCGA-BA-6868 86 384 In-Frame Intra-chr q31.1 q22.3 Seq+ 30289 ChimerSeq STARFusion TCGA_RNA-Seq MAMDC2-MRPS28 MAMDC2 chr9 72746528 + MRPS28 chr8 80831383 - Exonic hg19 HNSC TCGA-BA-6868 58 165 Out-of-frame Inter-chr q21.12 q21.13 Seq+ 30290 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57990165 + VMP1 chr17 57915656 + Exonic hg19 HNSC TCGA-BA-6868 23 122 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 30291 ChimerSeq STARFusion TCGA_RNA-Seq SGMS1-GRID1 SGMS1 chr10 52226650 - GRID1 chr10 87675996 - Exonic hg19 HNSC TCGA-BA-6868 3 22 5'UTR-CDS Intra-chr q11.23 Tumor suppressor gene q23.2 Seq+ 30292 ChimerSeq STARFusion TCGA_RNA-Seq PRIM2-ZNF451 PRIM2 chr6 57246966 + ZNF451 chr6 57025882 + Exonic hg19 HNSC TCGA-BA-6868 3 16 Out-of-frame Intra-chr p11.2 p12.1 Transcription factor 30293 ChimerSeq STARFusion TCGA_RNA-Seq MAMDC2-TPD52 MAMDC2 chr9 72746528 + TPD52 chr8 80870670 - Exonic hg19 HNSC TCGA-BA-6868 3 13 CDS-3'UTR Inter-chr q21.12 q21.13 Seq+ 30294 ChimerSeq STARFusion TCGA_RNA-Seq RAI1-PEMT RAI1 chr17 17627473 + PEMT chr17 17480341 - Exonic hg19 HNSC TCGA-BA-6869 6 26 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 30295 ChimerSeq STARFusion TCGA_RNA-Seq PEMT-RAI1 PEMT chr17 17480234 - RAI1 chr17 17627342 + Exonic hg19 HNSC TCGA-BA-6869 4 31 CDS-5'UTR Intra-chr p11.2 p11.2 Seq+ 30296 ChimerSeq STARFusion TCGA_RNA-Seq WDR66-IGH@ WDR66 chr12 122356407 + IGH@ chr14 106175004 - Exonic hg19 HNSC TCGA-CN-6010 25 2 Out-of-frame Inter-chr q24.31 32.33 30297 ChimerSeq STARFusion TCGA_RNA-Seq WDR66-IGHA1 WDR66 chr12 122356407 + IGHA1 chr14 106175004 - Exonic hg19 HNSC TCGA-CN-6010 25 1 Out-of-frame Inter-chr q24.31 30298 ChimerSeq STARFusion TCGA_RNA-Seq WDR66-IGH@ WDR66 chr12 122356407 + IGH@ chr14 106054734 - Exonic hg19 HNSC TCGA-CN-6010 21 1 Out-of-frame Inter-chr q24.31 32.33 30299 ChimerSeq STARFusion TCGA_RNA-Seq DAD1-IGH@ DAD1 chr14 23057924 - IGH@ chr14 106175004 - Exonic hg19 HNSC TCGA-CN-6010 8 3 Out-of-frame Intra-chr q11.2 32.33 30300 ChimerSeq STARFusion TCGA_RNA-Seq DAD1-IGHA1 DAD1 chr14 23057924 - IGHA1 chr14 106175004 - Exonic hg19 HNSC TCGA-CN-6010 8 2 Out-of-frame Intra-chr q11.2 30301 ChimerSeq STARFusion TCGA_RNA-Seq MAPK10-CCSER1 MAPK10 chr4 87374183 - CCSER1 chr4 91229395 + Exonic hg19 HNSC TCGA-CN-6010 2 17 Out-of-frame Intra-chr q21.3 Tumor suppressor gene q22.1 Seq+ 30302 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106111129 - Exonic hg19 HNSC TCGA-CN-6013 111 1 Out-of-frame Inter-chr q37.3 30303 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106136184 - Exonic hg19 HNSC TCGA-CN-6013 52 1 Out-of-frame Inter-chr q37.3 30304 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0195-IGKC KIAA0195 chr17 73487854 + IGKC chr2 89160117 - Exonic hg19 HNSC TCGA-CN-6013 21 1 Out-of-frame Inter-chr p11.2 30305 ChimerSeq STARFusion TCGA_RNA-Seq NFYC-CTPS1 NFYC chr1 41157539 + CTPS1 chr1 41466701 + Exonic hg19 HNSC TCGA-CN-6013 3 33 5'UTR-CDS Intra-chr p34.2 Transcription factor p34.2 Seq+ 30306 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-IGH@ TPT1 chr13 45915216 - IGH@ chr14 106136182 - Exonic hg19 HNSC TCGA-CN-6013 3 7 Out-of-frame Inter-chr q14.13 32.33 30307 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-IGHG4 TPT1 chr13 45915216 - IGHG4 chr14 106111127 - Exonic hg19 HNSC TCGA-CN-6013 3 6 Out-of-frame Inter-chr q14.13 30308 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106209410 - Exonic hg19 HNSC TCGA-CN-6012 33 3 Out-of-frame Inter-chr q24.2 32.33 30309 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHG1 SLC7A5 chr16 87868137 - IGHG1 chr14 106209410 - Exonic hg19 HNSC TCGA-CN-6012 33 2 Out-of-frame Inter-chr q24.2 q32.33 30310 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106136184 - Exonic hg19 HNSC TCGA-CN-6012 30 3 Out-of-frame Inter-chr q24.2 32.33 30311 ChimerSeq STARFusion TCGA_RNA-Seq TIMELESS-GLS2 TIMELESS chr12 56831250 - GLS2 chr12 56865679 - Exonic hg19 HNSC TCGA-CN-6012 10 71 Out-of-frame Intra-chr q13.3 q13.3 Tumor suppressor gene Seq+ 30312 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-USP7 IGL@ chr22 23165782 + USP7 chr16 8988936 - Exonic hg19 HNSC TCGA-CN-6012 15 2 Out-of-frame Inter-chr q11.22 p13.2 30313 ChimerSeq STARFusion TCGA_RNA-Seq ALDH3A1-IGH@ ALDH3A1 chr17 19646751 - IGH@ chr14 106330058 - Exonic hg19 HNSC TCGA-CN-6012 7 18 Out-of-frame Inter-chr p11.2 32.33 30314 ChimerSeq STARFusion TCGA_RNA-Seq ALDH3A1-IGHG3 ALDH3A1 chr17 19646751 - IGHG3 chr14 106330058 - Exonic hg19 HNSC TCGA-CN-6012 7 8 Out-of-frame Inter-chr p11.2 30315 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106209410 - Exonic hg19 HNSC TCGA-CN-6017 492 3 Out-of-frame Inter-chr q24.2 32.33 30316 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHG2 SLC7A5 chr16 87868137 - IGHG2 chr14 106111129 - Exonic hg19 HNSC TCGA-CN-6017 487 3 Out-of-frame Inter-chr q24.2 30317 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106111129 - Exonic hg19 HNSC TCGA-CN-6017 487 2 Out-of-frame Inter-chr q24.2 32.33 30318 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106136184 - Exonic hg19 HNSC TCGA-CN-6017 485 3 Out-of-frame Inter-chr q24.2 32.33 30319 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHG2 SLC7A5 chr16 87868137 - IGHG2 chr14 106136184 - Exonic hg19 HNSC TCGA-CN-6017 475 3 Out-of-frame Inter-chr q24.2 30320 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106111129 - Exonic hg19 HNSC TCGA-CN-6017 424 2 Out-of-frame Inter-chr q37.3 30321 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106209410 - Exonic hg19 HNSC TCGA-CN-6017 214 2 Out-of-frame Inter-chr q37.3 30322 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHG2 SLC7A5 chr16 87868137 - IGHG2 chr14 106209410 - Exonic hg19 HNSC TCGA-CN-6017 112 2 Out-of-frame Inter-chr q24.2 30323 ChimerSeq STARFusion TCGA_RNA-Seq SRL-IGH@ SRL chr16 4241167 - IGH@ chr14 106330462 - Exonic hg19 HNSC TCGA-CN-6017 111 3 Out-of-frame Inter-chr p13.3 32.33 30324 ChimerSeq STARFusion TCGA_RNA-Seq SRL-IGHG3 SRL chr16 4241167 - IGHG3 chr14 106330462 - Exonic hg19 HNSC TCGA-CN-6017 111 1 Out-of-frame Inter-chr p13.3 30325 ChimerSeq STARFusion TCGA_RNA-Seq DES-IGKC DES chr2 220290700 + IGKC chr2 89156868 - Exonic hg19 HNSC TCGA-CN-6017 3 49 Out-of-frame Intra-chr q35 p11.2 30326 ChimerSeq STARFusion TCGA_RNA-Seq COL5A1-IGHG3 COL5A1 chr9 137658318 + IGHG3 chr14 106330832 - Exonic hg19 HNSC TCGA-CN-6017 8 4 Out-of-frame Inter-chr q34.3 30327 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-MYL1 IGKC chr2 89156837 - MYL1 chr2 211168319 - Exonic hg19 HNSC TCGA-CN-6017 3 7 Out-of-frame Intra-chr p11.2 q34 30328 ChimerSeq STARFusion TCGA_RNA-Seq PDXDC1-ATP2A1 PDXDC1 chr16 15069077 + ATP2A1 chr16 28905476 + Exonic hg19 HNSC TCGA-CN-6019 2 6 In-Frame Intra-chr p13.11 p11.2 30329 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106136184 - Exonic hg19 HNSC TCGA-CN-6018 31 7 Out-of-frame Inter-chr q24.2 32.33 30330 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHG1 SLC7A5 chr16 87868137 - IGHG1 chr14 106209410 - Exonic hg19 HNSC TCGA-CN-6018 31 2 Out-of-frame Inter-chr q24.2 q32.33 30331 ChimerSeq STARFusion TCGA_RNA-Seq SMURF1-AZGP1 SMURF1 chr7 98741349 - AZGP1 chr7 99569629 - Exonic hg19 HNSC TCGA-CN-6018 6 32 CDS-5'UTR Intra-chr q22.1 Tumor suppressor gene Seq+ 30332 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106237745 - Exonic hg19 HNSC TCGA-CN-6018 8 7 Out-of-frame Inter-chr q24.2 32.33 30333 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHG1 SLC7A5 chr16 87868137 - IGHG1 chr14 106237745 - Exonic hg19 HNSC TCGA-CN-6018 8 2 Out-of-frame Inter-chr q24.2 q32.33 30334 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106209410 - Exonic hg19 HNSC TCGA-CN-6018 7 5 Out-of-frame Inter-chr q24.2 32.33 30335 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106111129 - Exonic hg19 HNSC TCGA-CN-6018 7 5 Out-of-frame Inter-chr q24.2 32.33 30336 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57733388 + VMP1 chr17 57915656 + Exonic hg19 HNSC TCGA-CN-6018 3 10 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 30337 ChimerSeq STARFusion TCGA_RNA-Seq USP9X-BLVRB USP9X chrX 41078484 + BLVRB chr19 40964452 - Exonic hg19 HNSC TCGA-T2-A6WZ 24 106 In-Frame Inter-chr p11.4 Oncogene q13.2 Seq+ 30338 ChimerSeq STARFusion TCGA_RNA-Seq KRT14-IGH@ KRT14 chr17 39739908 - IGH@ chr14 106173744 - Exonic hg19 HNSC TCGA-T2-A6WZ 3 23 Out-of-frame Inter-chr q21.2 32.33 30339 ChimerSeq STARFusion TCGA_RNA-Seq MACROD1-BAD MACROD1 chr11 63918711 - BAD chr11 64051848 - Exonic hg19 HNSC TCGA-T2-A6WZ 5 15 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 30340 ChimerSeq STARFusion TCGA_RNA-Seq KRT14-IGHA1 KRT14 chr17 39739908 - IGHA1 chr14 106173744 - Exonic hg19 HNSC TCGA-T2-A6WZ 3 12 Out-of-frame Inter-chr q21.2 30341 ChimerSeq STARFusion TCGA_RNA-Seq ASH2L-C8orf86 ASH2L chr8 37968351 + C8orf86 chr8 38374030 - Exonic hg19 HNSC TCGA-CR-7364 6 10 In-Frame Intra-chr p11.23 p11.22 Seq+ 30342 ChimerSeq STARFusion TCGA_RNA-Seq RIPK1-SERPINB9 RIPK1 chr6 3064293 + SERPINB9 chr6 2900855 - Exonic hg19 HNSC TCGA-CR-7364 7 2 5'UTR-5'UTR Intra-chr p25.2 TKL:RIPK p25.2 30343 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-P4HB IGH@ chr14 106208090 - P4HB chr17 79804398 - Exonic hg19 HNSC TCGA-CR-7364 3 10 Out-of-frame Inter-chr 32.33 q25.3 30344 ChimerSeq STARFusion TCGA_RNA-Seq EIF4EBP1-TACC1 EIF4EBP1 chr8 37888236 + TACC1 chr8 38704217 + Exonic hg19 HNSC TCGA-CR-7364 4 4 Out-of-frame Intra-chr p11.23 p11.22 Seq+ 30345 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-P4HB IGHG1 chr14 106208090 - P4HB chr17 79804398 - Exonic hg19 HNSC TCGA-CR-7364 3 5 Out-of-frame Inter-chr q32.33 q25.3 30346 ChimerSeq STARFusion TCGA_RNA-Seq CRHR1-LRRC37A CRHR1 chr17 43699407 + LRRC37A chr17 44399688 + Exonic hg19 HNSC TCGA-CR-7365 7 44 5'UTR-CDS Intra-chr q21.31 30347 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242532 + KRT14 chr17 39768618 - Exonic hg19 HNSC TCGA-CR-7365 7 20 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 30348 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242540 + KRT14 chr17 39768611 - Exonic hg19 HNSC TCGA-CR-7365 5 17 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 30349 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242532 + KRT14 chr17 39742770 - Exonic hg19 HNSC TCGA-CR-7365 3 17 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 30350 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242540 + KRT14 chr17 39742763 - Exonic hg19 HNSC TCGA-CR-7365 3 17 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 30351 ChimerSeq STARFusion TCGA_RNA-Seq ALDOA-KRT5 ALDOA chr16 30077248 + KRT5 chr12 52914092 - Exonic hg19 HNSC TCGA-CR-7365 2 9 5'UTR-5'UTR Inter-chr p11.2 q13.13 30352 ChimerSeq STARFusion TCGA_RNA-Seq TFB2M-SMYD3 TFB2M chr1 246711847 - SMYD3 chr1 246093239 - Exonic hg19 HNSC TCGA-CR-7367 28 39 In-Frame Intra-chr q44 q44 Transcription factor Seq+ 30353 ChimerSeq STARFusion TCGA_RNA-Seq PI3-KRT6A PI3 chr20 43805102 + KRT6A chr12 52886999 - Exonic hg19 HNSC TCGA-CR-7367 3 41 Out-of-frame Inter-chr q13.12 q13.13 30354 ChimerSeq STARFusion TCGA_RNA-Seq TIAM1-PCBP3 TIAM1 chr21 32711558 - PCBP3 chr21 47316122 + Exonic hg19 HNSC TCGA-CR-7367 7 19 5'UTR-CDS Intra-chr q22.11 q22.3 Seq+ 30355 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57915656 + Exonic hg19 HNSC TCGA-CR-7369 27 90 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 30356 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57971285 + VMP1 chr17 57915656 + Exonic hg19 HNSC TCGA-CR-7369 3 87 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 30357 ChimerSeq STARFusion TCGA_RNA-Seq USP13-PEX5L USP13 chr3 179474866 + PEX5L chr3 179597911 - Exonic hg19 HNSC TCGA-CR-7369 2 14 In-Frame Intra-chr q26.33 q26.33 30358 ChimerSeq STARFusion TCGA_RNA-Seq NPC1-ANKRD29 NPC1 chr18 21113319 - ANKRD29 chr18 21229157 - Exonic hg19 HNSC TCGA-CR-7369 2 6 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 30359 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGH@ TET3 chr2 74329258 + IGH@ chr14 106209408 - Exonic hg19 HNSC TCGA-D6-6517 97 1 Out-of-frame Inter-chr p13.1 Transcription factor 32.33 30360 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGH@ TET3 chr2 74329258 + IGH@ chr14 106111127 - Exonic hg19 HNSC TCGA-D6-6517 89 1 Out-of-frame Inter-chr p13.1 Transcription factor 32.33 30361 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGH@ TET3 chr2 74329258 + IGH@ chr14 106237743 - Exonic hg19 HNSC TCGA-D6-6517 77 1 Out-of-frame Inter-chr p13.1 Transcription factor 32.33 30362 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGHG3 TET3 chr2 74329258 + IGHG3 chr14 106237743 - Exonic hg19 HNSC TCGA-D6-6517 77 1 Out-of-frame Inter-chr p13.1 Transcription factor 30363 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGH@ TET3 chr2 74329258 + IGH@ chr14 106136182 - Exonic hg19 HNSC TCGA-D6-6517 74 1 Out-of-frame Inter-chr p13.1 Transcription factor 32.33 30364 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGH@ TET3 chr2 74329258 + IGH@ chr14 106092403 - Exonic hg19 HNSC TCGA-D6-6517 48 1 Out-of-frame Inter-chr p13.1 Transcription factor 32.33 30365 ChimerSeq STARFusion TCGA_RNA-Seq IFT20-VTN IFT20 chr17 26662366 - VTN chr17 26697291 - Exonic hg19 HNSC TCGA-D6-6517 13 123 5'UTR-5'UTR Intra-chr q11.2 q11.2 Seq+ 30366 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57697534 + VMP1 chr17 57915656 + Exonic hg19 HNSC TCGA-D6-6517 15 73 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 30367 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGH@ TET3 chr2 74329258 + IGH@ chr14 106175002 - Exonic hg19 HNSC TCGA-D6-6517 22 1 Out-of-frame Inter-chr p13.1 Transcription factor 32.33 30368 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57742270 + VMP1 chr17 57886157 + Exonic hg19 HNSC TCGA-D6-6517 2 68 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 30369 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106209410 - Exonic hg19 HNSC TCGA-D6-6517 16 11 Out-of-frame Inter-chr q24.2 32.33 30370 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHG1 SLC7A5 chr16 87868137 - IGHG1 chr14 106209410 - Exonic hg19 HNSC TCGA-D6-6517 16 5 Out-of-frame Inter-chr q24.2 q32.33 30371 ChimerSeq STARFusion TCGA_RNA-Seq LAMC2-IGH@ LAMC2 chr1 183196797 + IGH@ chr14 106330467 - Exonic hg19 HNSC TCGA-D6-6517 13 5 Out-of-frame Inter-chr q25.3 32.33 30372 ChimerSeq STARFusion TCGA_RNA-Seq LAMC2-IGHG3 LAMC2 chr1 183196797 + IGHG3 chr14 106330467 - Exonic hg19 HNSC TCGA-D6-6517 13 1 Out-of-frame Inter-chr q25.3 30373 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106237745 - Exonic hg19 HNSC TCGA-D6-6517 10 9 Out-of-frame Inter-chr q24.2 32.33 30374 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHG1 SLC7A5 chr16 87868137 - IGHG1 chr14 106237745 - Exonic hg19 HNSC TCGA-D6-6517 10 5 Out-of-frame Inter-chr q24.2 q32.33 30375 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106092405 - Exonic hg19 HNSC TCGA-D6-6517 8 9 Out-of-frame Inter-chr q24.2 32.33 30376 ChimerSeq STARFusion TCGA_RNA-Seq DST-HMGN1 DST chr6 56323168 - HMGN1 chr21 40720983 - Exonic hg19 HNSC TCGA-D6-6517 6 8 Out-of-frame Inter-chr p12.1 Oncogene q22.2 Seq+ 30377 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-KRT16 ACTB chr7 5567635 - KRT16 chr17 39767973 - Exonic hg19 HNSC TCGA-D6-6516 2 32 3'UTR-CDS Inter-chr p22.1 q21.2 30378 ChimerSeq STARFusion TCGA_RNA-Seq NDUFA7-PRKCG NDUFA7 chr19 8381380 - PRKCG chr19 54406327 + Exonic hg19 HNSC TCGA-D6-6515 22 78 Out-of-frame Intra-chr p13.2 q13.42 Seq+ 30379 ChimerSeq STARFusion TCGA_RNA-Seq NDUFA7-PRKCG NDUFA7 chr19 8381380 - PRKCG chr19 54406327 + Exonic hg19 HNSC TCGA-D6-6515 22 77 Out-of-frame Intra-chr p13.2 q13.42 Seq+ 30380 ChimerSeq STARFusion TCGA_RNA-Seq KRT13-H19 KRT13 chr17 39657568 - H19 chr11 2016848 - Exonic hg19 HNSC TCGA-CV-7261 3 291 Out-of-frame Inter-chr q21.2 p15.5 Tumor suppressor gene 30381 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-LRP1 IGH@ chr14 106725199 - LRP1 chr12 57574181 + Exonic hg19 HNSC TCGA-CV-7263 10 1 Out-of-frame Inter-chr 32.33 q13.3 30382 ChimerSeq STARFusion TCGA_RNA-Seq IGFBP3-IGL@ IGFBP3 chr7 45954462 - IGL@ chr22 23235961 + Exonic hg19 HNSC TCGA-CV-7263 9 1 Out-of-frame Inter-chr p12.3 Tumor suppressor gene q11.22 30383 ChimerSeq STARFusion TCGA_RNA-Seq NUCB1-IGH@ NUCB1 chr19 49422140 + IGH@ chr14 106330071 - Exonic hg19 HNSC TCGA-CV-7263 8 2 Out-of-frame Inter-chr q13.33 32.33 30384 ChimerSeq STARFusion TCGA_RNA-Seq NUCB1-IGHG3 NUCB1 chr19 49422140 + IGHG3 chr14 106330071 - Exonic hg19 HNSC TCGA-CV-7263 8 1 Out-of-frame Inter-chr q13.33 30385 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT16 EGFR chr7 55242532 + KRT16 chr17 39768618 - Exonic hg19 HNSC TCGA-CV-7263 5 4 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 30386 ChimerSeq STARFusion TCGA_RNA-Seq UBE2L3-BID UBE2L3 chr22 21965332 + BID chr22 18222254 - Exonic hg19 HNSC TCGA-P3-A6T0 3 9 In-Frame Intra-chr q11.21 q11.21 Seq+ 30387 ChimerSeq STARFusion TCGA_RNA-Seq UBE2L3-BID UBE2L3 chr22 21965332 + BID chr22 18232940 - Exonic hg19 HNSC TCGA-P3-A6T0 2 9 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 30388 ChimerSeq STARFusion TCGA_RNA-Seq CHD7-CLVS1 CHD7 chr8 61714152 + CLVS1 chr8 62044329 + Exonic hg19 HNSC TCGA-P3-A6T3 4 21 CDS-5'UTR Intra-chr q12.2 q12.2 Seq+ 30389 ChimerSeq STARFusion TCGA_RNA-Seq NRP2-PARD3B NRP2 chr2 206562445 + PARD3B chr2 206480180 + Exonic hg19 HNSC TCGA-P3-A6T3 2 7 In-Frame Intra-chr q33.3 q33.3 Seq+ 30390 ChimerSeq STARFusion TCGA_RNA-Seq KRT14-MIDN KRT14 chr17 39739532 - MIDN chr19 1255542 + Exonic hg19 HNSC TCGA-H7-8502 3 2 Out-of-frame Inter-chr q21.2 p13.3 30391 ChimerSeq STARFusion TCGA_RNA-Seq ELP2-MOCOS ELP2 chr18 33726344 + MOCOS chr18 33828885 + Exonic hg19 HNSC TCGA-T2-A6X2 2 12 Out-of-frame Intra-chr q12.2 q12.2 30392 ChimerSeq STARFusion TCGA_RNA-Seq KRT16-KIF13B KRT16 chr17 39767891 - KIF13B chr8 29005037 - Exonic hg19 HNSC TCGA-CV-A6JT 12 0 Out-of-frame Inter-chr q21.2 p12 30393 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-KRT17 TPT1 chr13 45913667 - KRT17 chr17 39779284 - Exonic hg19 HNSC TCGA-CV-A6JT 7 8 In-Frame Inter-chr q14.13 q21.2 30394 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57737949 + VMP1 chr17 57915656 + Exonic hg19 HNSC TCGA-P3-A6T4 105 308 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 30395 ChimerSeq STARFusion TCGA_RNA-Seq CFLAR-NDUFB3 CFLAR chr2 202005162 + NDUFB3 chr2 201950182 + Exonic hg19 HNSC TCGA-P3-A6T4 61 99 Out-of-frame Intra-chr q33.1 q33.1 Seq+ 30396 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57990165 + VMP1 chr17 57886157 + Exonic hg19 HNSC TCGA-P3-A6T4 20 61 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 30397 ChimerSeq STARFusion TCGA_RNA-Seq CHST11-TXNRD1 CHST11 chr12 104995769 + TXNRD1 chr12 104732917 + Exonic hg19 HNSC TCGA-P3-A6T4 2 10 In-Frame Intra-chr q23.3 q23.3 Seq+ 30398 ChimerSeq STARFusion TCGA_RNA-Seq CHST11-TXNRD1 CHST11 chr12 104995769 + TXNRD1 chr12 104742131 + Exonic hg19 HNSC TCGA-P3-A6T4 2 10 In-Frame Intra-chr q23.3 q23.3 Seq+ 30399 ChimerSeq STARFusion TCGA_RNA-Seq FRMD6-LINC00640 FRMD6 chr14 51956138 + LINC00640 chr14 51800111 + Exonic hg19 HNSC TCGA-CR-6491 4 36 Out-of-frame Intra-chr q22.1 q22.1 30400 ChimerSeq STARFusion TCGA_RNA-Seq KRT14-GTPBP2 KRT14 chr17 39740509 - GTPBP2 chr6 43592994 - Exonic hg19 HNSC TCGA-CR-6491 7 1 Out-of-frame Inter-chr q21.2 p21.1 30401 ChimerSeq STARFusion TCGA_RNA-Seq DHX40-VMP1 DHX40 chr17 57683035 + VMP1 chr17 57895073 + Exonic hg19 HNSC TCGA-CR-6493 11 50 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 30402 ChimerSeq STARFusion TCGA_RNA-Seq S100A9-KRT17 S100A9 chr1 153333416 + KRT17 chr17 39780387 - Exonic hg19 HNSC TCGA-CR-6492 3 35 Out-of-frame Inter-chr q21.3 q21.2 30403 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57697534 + VMP1 chr17 57915656 + Exonic hg19 HNSC TCGA-F7-A623 19 108 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 30404 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57721844 + VMP1 chr17 57886157 + Exonic hg19 HNSC TCGA-F7-A623 6 104 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 30405 ChimerSeq STARFusion TCGA_RNA-Seq LEPROTL1-RBPMS LEPROTL1 chr8 29962002 + RBPMS chr8 30402011 + Exonic hg19 HNSC TCGA-F7-A623 8 35 Out-of-frame Intra-chr p12 p12 30406 ChimerSeq STARFusion TCGA_RNA-Seq PPIG-SSB PPIG chr2 170471191 + SSB chr2 170661984 + Exonic hg19 HNSC TCGA-F7-A623 5 29 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 30407 ChimerSeq STARFusion TCGA_RNA-Seq PPIG-SSB PPIG chr2 170471234 + SSB chr2 170661984 + Exonic hg19 HNSC TCGA-F7-A623 4 26 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 30408 ChimerSeq STARFusion TCGA_RNA-Seq MARCH6-WASIR1 2019_ 3_ 6_ chr5 10354029 + WASIR1 chrX 155246454 - Exonic hg19 HNSC TCGA-F7-A623 7 13 Out-of-frame Inter-chr p15.2 q28 30409 ChimerSeq STARFusion TCGA_RNA-Seq SMAP1-KHDC1 SMAP1 chr6 71508440 + KHDC1 chr6 74001763 - Exonic hg19 HNSC TCGA-F7-A623 5 11 Out-of-frame Intra-chr q13 q13 Seq+ 30410 ChimerSeq STARFusion TCGA_RNA-Seq RPL23AP53-PWWP2B RPL23AP53 chr8 177515 - PWWP2B chr10 134218884 + Exonic hg19 HNSC TCGA-F7-A623 3 17 Out-of-frame Inter-chr p23.3 q26.3 30411 ChimerSeq STARFusion TCGA_RNA-Seq FUT10-RNF122 FUT10 chr8 33330582 - RNF122 chr8 33416289 - Exonic hg19 HNSC TCGA-F7-A623 5 8 5'UTR-CDS Intra-chr p12 p12 Seq+ 30412 ChimerSeq STARFusion TCGA_RNA-Seq UBE2H-ZC3HC1 UBE2H chr7 129519408 - ZC3HC1 chr7 129668869 - Exonic hg19 HNSC TCGA-F7-A623 3 13 In-Frame Intra-chr q32.2 q32.2 Seq+ 30413 ChimerSeq STARFusion TCGA_RNA-Seq BECN1-GPATCH8 BECN1 chr17 40965966 - GPATCH8 chr17 42516083 - Exonic hg19 HNSC TCGA-F7-A623 4 7 CDS-3'UTR Intra-chr q21.31 Tumor suppressor gene q21.31 Seq+ 30414 ChimerSeq STARFusion TCGA_RNA-Seq PIBF1-KLF5 PIBF1 chr13 73428293 + KLF5 chr13 73637962 + Exonic hg19 HNSC TCGA-F7-A623 3 7 Out-of-frame Intra-chr q21.33 q22.1 Tumor suppressor gene Transcription factor 30415 ChimerSeq STARFusion TCGA_RNA-Seq RPL23AP53-PWWP2B RPL23AP53 chr8 182129 - PWWP2B chr10 134230565 + Exonic hg19 HNSC TCGA-F7-A623 2 10 3'UTR-3'UTR Inter-chr p23.3 q26.3 30416 ChimerSeq STARFusion TCGA_RNA-Seq MARCH6-WASIR1 2019_ 3_ 6_ chr5 10354029 + WASIR1 chrY 59349460 - Exonic hg19 HNSC TCGA-F7-A623 3 5 Out-of-frame Inter-chr p15.2 q28 30417 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-CEP112 TANC2 chr17 61176718 + CEP112 chr17 63957716 - Exonic hg19 HNSC TCGA-F7-A623 2 8 Out-of-frame Intra-chr q23.2 q24.1 Seq+ 30418 ChimerSeq STARFusion TCGA_RNA-Seq TBL1X-GPR143 TBL1X chrX 9469889 + GPR143 chrX 9711713 - Exonic hg19 HNSC TCGA-HL-7533 16 69 5'UTR-CDS Intra-chr p22.31 p22.2 Seq+ 30419 ChimerSeq STARFusion TCGA_RNA-Seq TBL1X-GPR143 TBL1X chrX 9469889 + GPR143 chrX 9709495 - Exonic hg19 HNSC TCGA-HL-7533 12 67 5'UTR-CDS Intra-chr p22.31 p22.2 Seq+ 30420 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1432-PDCD1LG2 KIAA1432 chr9 5629453 + PDCD1LG2 chr9 5549335 + Exonic hg19 HNSC TCGA-HL-7533 15 47 Out-of-frame Intra-chr p24.1 Seq+ 30421 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1432-PDCD1LG2 KIAA1432 chr9 5629453 + PDCD1LG2 chr9 5557618 + Exonic hg19 HNSC TCGA-HL-7533 3 47 Out-of-frame Intra-chr p24.1 Seq+ 30422 ChimerSeq STARFusion TCGA_RNA-Seq NF1-RNF135 NF1 chr17 29497015 + RNF135 chr17 29324260 + Exonic hg19 HNSC TCGA-HL-7533 7 24 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 30423 ChimerSeq STARFusion TCGA_RNA-Seq IQGAP1-SPPL2A IQGAP1 chr15 90934105 + SPPL2A chr15 51000071 - Exonic hg19 HNSC TCGA-HL-7533 8 8 Out-of-frame Intra-chr q26.1 q21.2 Seq+ 30424 ChimerSeq STARFusion TCGA_RNA-Seq NF1-RNF135 NF1 chr17 29490394 + RNF135 chr17 29324260 + Exonic hg19 HNSC TCGA-HL-7533 2 24 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 30425 ChimerSeq STARFusion TCGA_RNA-Seq KRT5-AKR1C2 KRT5 chr12 52911667 - AKR1C2 chr10 5046078 - Exonic hg19 HNSC TCGA-CX-7219 14 29 Out-of-frame Inter-chr q13.13 p15.1 30426 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-FBLIM1 IGH@ chr14 106774337 - FBLIM1 chr1 16085065 + Exonic hg19 HNSC TCGA-CV-6942 14 2 Out-of-frame Inter-chr 32.33 p36.21 30427 ChimerSeq STARFusion TCGA_RNA-Seq NCKAP5-LYPD1 NCKAP5 chr2 133554201 - LYPD1 chr2 133403853 - Exonic hg19 HNSC TCGA-CV-6942 5 19 Out-of-frame Intra-chr q21.2 q21.2 30428 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242532 + KRT14 chr17 39742770 - Exonic hg19 HNSC TCGA-CV-6942 3 9 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 30429 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-FLNA IGH@ chr14 107078376 - FLNA chrX 153581551 - Exonic hg19 HNSC TCGA-CV-6942 3 9 Out-of-frame Inter-chr 32.33 q28 Tumor suppressor gene 30430 ChimerSeq STARFusion TCGA_RNA-Seq HECTD1-IGH@ HECTD1 chr14 31675031 - IGH@ chr14 106330058 - Exonic hg19 HNSC TCGA-CV-6942 4 2 Out-of-frame Intra-chr q12 32.33 30431 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-ACADM EGFR chr7 55087058 + ACADM chr1 76198329 + Exonic hg19 HNSC TCGA-CV-6941 33 172 In-Frame Inter-chr p11.2 TK:EGFR Oncogene p31.1 Seq+ 30432 ChimerSeq STARFusion TCGA_RNA-Seq LPP-LEPREL1 LPP chr3 188327632 + LEPREL1 chr3 189713231 - Exonic hg19 HNSC TCGA-CV-6941 7 32 In-Frame Intra-chr q27.3 Oncogene Seq+ 30433 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D22A-GCAT TBC1D22A chr22 47393605 + GCAT chr22 38206034 + Exonic hg19 HNSC TCGA-CV-6941 5 30 In-Frame Intra-chr q13.31 q13.1 Seq+ 30434 ChimerSeq STARFusion TCGA_RNA-Seq LIMK2-ATXN10 LIMK2 chr22 31654412 + ATXN10 chr22 46202839 + Exonic hg19 HNSC TCGA-CV-6941 3 23 In-Frame Intra-chr q12.2 TKL:LISK q13.31 Seq+ 30435 ChimerSeq STARFusion TCGA_RNA-Seq TP63-CYTH3 TP63 chr3 189526315 + CYTH3 chr7 6230162 - Exonic hg19 HNSC TCGA-CV-6941 4 16 Out-of-frame Inter-chr q28 Tumor suppressor gene Transcription factor p22.1 Seq+ 30436 ChimerSeq STARFusion TCGA_RNA-Seq CELSR1-PACSIN2 CELSR1 chr22 46859604 - PACSIN2 chr22 43308163 - Exonic hg19 HNSC TCGA-CV-6941 4 12 CDS-5'UTR Intra-chr q13.31 q13.2 Seq+ 30437 ChimerSeq STARFusion TCGA_RNA-Seq ATXN10-TUBGCP6 ATXN10 chr22 46136418 + TUBGCP6 chr22 50666457 - Exonic hg19 HNSC TCGA-CV-6941 2 13 In-Frame Intra-chr q13.31 q13.33 Seq+ 30438 ChimerSeq STARFusion TCGA_RNA-Seq SMARCB1-ACR SMARCB1 chr22 24167602 + ACR chr22 51182489 + Exonic hg19 HNSC TCGA-CV-6941 2 9 CDS-5'UTR Intra-chr q11.23 Oncogene Tumor suppressor gene Seq+ 30439 ChimerSeq STARFusion TCGA_RNA-Seq SH3BP1-CACNA1I SH3BP1 chr22 38039795 + CACNA1I chr22 40057970 + Exonic hg19 HNSC TCGA-CV-6941 2 7 In-Frame Intra-chr q13.1 q13.1 Seq+ 30440 ChimerSeq STARFusion TCGA_RNA-Seq NAA25-SLC25A21 NAA25 chr12 112525487 - SLC25A21 chr14 37154130 - Exonic hg19 HNSC TCGA-CV-6940 18 154 In-Frame Inter-chr q24.13 q13.3 Seq+ 30441 ChimerSeq STARFusion TCGA_RNA-Seq NAA25-SLC25A21 NAA25 chr12 112528530 - SLC25A21 chr14 37154130 - Exonic hg19 HNSC TCGA-CV-6940 2 154 Out-of-frame Inter-chr q24.13 q13.3 Seq+ 30442 ChimerSeq STARFusion TCGA_RNA-Seq ITFG3-LUC7L ITFG3 chr16 299657 + LUC7L chr16 258187 - Exonic hg19 HNSC TCGA-CV-6940 2 22 5'UTR-CDS Intra-chr p13.3 Seq+ 30443 ChimerSeq STARFusion TCGA_RNA-Seq AK3-IL33 AK3 chr9 4740937 - IL33 chr9 6241684 + Exonic hg19 HNSC TCGA-C9-A47Z 63 216 CDS-5'UTR Intra-chr p24.1 p24.1 Seq+ 30444 ChimerSeq STARFusion TCGA_RNA-Seq NDRG3-CPLX1 NDRG3 chr20 35374448 - CPLX1 chr4 786396 - Exonic hg19 HNSC TCGA-C9-A47Z 5 9 5'UTR-CDS Inter-chr q11.23 p16.3 Seq+ 30445 ChimerSeq STARFusion TCGA_RNA-Seq PLXDC2-KRT5 PLXDC2 chr10 20105754 + KRT5 chr12 52911462 - Exonic hg19 HNSC TCGA-C9-A47Z 6 1 Out-of-frame Inter-chr p12.31 q13.13 30446 ChimerSeq STARFusion TCGA_RNA-Seq GRHL2-NACAP1 GRHL2 chr8 102505077 + NACAP1 chr8 102379851 + Exonic hg19 HNSC TCGA-CV-6948 22 225 Out-of-frame Intra-chr q22.3 Transcription factor q22.3 30447 ChimerSeq STARFusion TCGA_RNA-Seq GRHL2-NACAP1 GRHL2 chr8 102505017 + NACAP1 chr8 102379851 + Exonic hg19 HNSC TCGA-CV-6948 22 224 CDS-5'UTR Intra-chr q22.3 Transcription factor q22.3 30448 ChimerSeq STARFusion TCGA_RNA-Seq TTC38-NACAP1 TTC38 chr22 46674558 + NACAP1 chr8 102379851 + Exonic hg19 HNSC TCGA-CV-6948 34 134 CDS-5'UTR Inter-chr q13.31 q22.3 Seq+ 30449 ChimerSeq STARFusion TCGA_RNA-Seq GRHL2-NACAP1 GRHL2 chr8 102504814 + NACAP1 chr8 102379851 + Exonic hg19 HNSC TCGA-CV-6948 3 224 Out-of-frame Intra-chr q22.3 Transcription factor q22.3 30450 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-TRAP1 CREBBP chr16 3860604 - TRAP1 chr16 3740986 - Exonic hg19 HNSC TCGA-CV-6948 11 47 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 30451 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPK-IGH@ HNRNPK chr9 86586889 - IGH@ chr14 106330467 - Exonic hg19 HNSC TCGA-CV-6948 20 1 Out-of-frame Inter-chr q21.32 32.33 30452 ChimerSeq STARFusion TCGA_RNA-Seq ZNF410-LIN52 ZNF410 chr14 74376133 + LIN52 chr14 74665625 + Exonic hg19 HNSC TCGA-CV-6948 5 38 In-Frame Intra-chr q24.3 Transcription factor q24.3 Seq+ 30453 ChimerSeq STARFusion TCGA_RNA-Seq YME1L1-ANKRD26 YME1L1 chr10 27431316 - ANKRD26 chr10 27284076 - Exonic hg19 HNSC TCGA-CV-6948 4 36 CDS-3'UTR Intra-chr p12.1 p12.1 Seq+ 30454 ChimerSeq STARFusion TCGA_RNA-Seq DGCR8-SGSM1 DGCR8 chr22 20067906 + SGSM1 chr22 25240864 + Exonic hg19 HNSC TCGA-CV-6948 5 30 5'UTR-CDS Intra-chr q11.21 q11.23 Seq+ 30455 ChimerSeq STARFusion TCGA_RNA-Seq MKRN2-C12orf75 MKRN2 chr3 12618240 + C12orf75 chr12 105720748 + Exonic hg19 HNSC TCGA-CV-6948 2 22 CDS-5'UTR Inter-chr p25.2 q23.3 Seq+ 30456 ChimerSeq STARFusion TCGA_RNA-Seq CLNS1A-PAK1 CLNS1A chr11 77322360 - PAK1 chr11 77103586 - Exonic hg19 HNSC TCGA-CV-6948 3 12 3'UTR-5'UTR Intra-chr q14.1 q14.1 STE:STE20 30457 ChimerSeq STARFusion TCGA_RNA-Seq LHPP-TANGO6 LHPP chr10 126172895 + TANGO6 chr16 69056731 + Exonic hg19 HNSC TCGA-CV-6948 2 11 Out-of-frame Inter-chr q26.13 q22.1 Seq+ 30458 ChimerSeq STARFusion TCGA_RNA-Seq MRPS6-MYO3A MRPS6 chr21 35446045 + MYO3A chr10 26490194 + Exonic hg19 HNSC TCGA-CV-6948 2 11 In-Frame Inter-chr q22.11 p12.1 STE:STE20 Seq+ 30459 ChimerSeq STARFusion TCGA_RNA-Seq SLC5A3-MYO3A SLC5A3 chr21 35446045 + MYO3A chr10 26490194 + Exonic hg19 HNSC TCGA-CV-6948 2 11 5'UTR-CDS Inter-chr q22.11 p12.1 STE:STE20 Seq+ 30460 ChimerSeq STARFusion TCGA_RNA-Seq SLC5A3-MYO3A SLC5A3 chr21 35446045 + MYO3A chr10 26490194 + Exonic hg19 HNSC TCGA-CV-6948 2 11 5'UTR-CDS Inter-chr q22.11 p12.1 STE:STE20 Seq+ 30461 ChimerSeq STARFusion TCGA_RNA-Seq S100A8-KRT14 S100A8 chr1 153362589 - KRT14 chr17 39768695 - Exonic hg19 HNSC TCGA-CV-6436 3 27 Out-of-frame Inter-chr q21.3 q21.2 30462 ChimerSeq STARFusion TCGA_RNA-Seq TMSB10-HAP1 TMSB10 chr2 85133236 + HAP1 chr17 39877732 - Exonic hg19 HNSC TCGA-CV-6436 5 6 Out-of-frame Inter-chr p11.2 q21.2 30463 ChimerSeq STARFusion TCGA_RNA-Seq RALY-ASXL1 RALY chr20 32619410 + ASXL1 chr20 31015931 + Exonic hg19 HNSC TCGA-CV-6433 3 12 5'UTR-CDS Intra-chr q11.22 q11.21 Oncogene Tumor suppressor gene Seq+ 30464 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-ST13 MKL1 chr22 40948110 - ST13 chr22 41240913 - Exonic hg19 HNSC TCGA-HD-7753 125 354 5'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 30465 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1-PIBF1 WHSC1 chr4 1873269 + PIBF1 chr13 73539412 + Exonic hg19 HNSC TCGA-HD-7753 65 238 5'UTR-CDS Inter-chr Oncogene q21.33 Seq+ 30466 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1-PIBF1 WHSC1 chr4 1873269 + PIBF1 chr13 73572960 + Exonic hg19 HNSC TCGA-HD-7753 17 231 5'UTR-CDS Inter-chr Oncogene q21.33 Seq+ 30467 ChimerSeq STARFusion TCGA_RNA-Seq PARD6G-RFTN2 PARD6G chr18 78005160 - RFTN2 chr2 198437004 - Exonic hg19 HNSC TCGA-HD-7753 17 102 In-Frame Inter-chr q23 q33.1 Seq+ 30468 ChimerSeq STARFusion TCGA_RNA-Seq LAMC2-CCDC53 LAMC2 chr1 183200238 + CCDC53 chr12 102439897 - Exonic hg19 HNSC TCGA-HD-7753 12 47 In-Frame Inter-chr q25.3 Seq+ 30469 ChimerSeq STARFusion TCGA_RNA-Seq FILIP1L-IMPG2 FILIP1L chr3 99594916 - IMPG2 chr3 100988417 - Exonic hg19 HNSC TCGA-HD-7753 8 16 5'UTR-CDS Intra-chr q12.1 q12.3 Seq+ 30470 ChimerSeq STARFusion TCGA_RNA-Seq S100A9-KRT17 S100A9 chr1 153333416 + KRT17 chr17 39780387 - Exonic hg19 HNSC TCGA-HD-7753 3 30 Out-of-frame Inter-chr q21.3 q21.2 30471 ChimerSeq STARFusion TCGA_RNA-Seq EML6-IGH@ EML6 chr2 55126809 + IGH@ chr14 106330842 - Exonic hg19 HNSC TCGA-HD-7753 10 0 Out-of-frame Inter-chr p16.1 32.33 30472 ChimerSeq STARFusion TCGA_RNA-Seq EML6-IGHJ3 EML6 chr2 55126809 + IGHJ3 chr14 106330842 - Exonic hg19 HNSC TCGA-HD-7753 10 0 Out-of-frame Inter-chr p16.1 q32.33 30473 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57751133 + VMP1 chr17 57886157 + Exonic hg19 HNSC TCGA-HD-7753 5 12 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 30474 ChimerSeq STARFusion TCGA_RNA-Seq FILIP1L-IMPG2 FILIP1L chr3 99593132 - IMPG2 chr3 100988417 - Exonic hg19 HNSC TCGA-HD-7753 3 15 5'UTR-CDS Intra-chr q12.1 q12.3 Seq+ 30475 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH1-CARD9 NOTCH1 chr9 139417302 - CARD9 chr9 139265913 - Exonic hg19 HNSC TCGA-CN-4733 47 196 In-Frame Intra-chr q34.3 Oncogene Tumor suppressor gene q34.3 30476 ChimerSeq STARFusion TCGA_RNA-Seq RCL1-PLGRKT RCL1 chr9 4793227 + PLGRKT chr9 5361888 - Exonic hg19 HNSC TCGA-CN-4733 11 18 Out-of-frame Intra-chr p24.1 p24.1 Seq+ 30477 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-TGM3 EPB41L1 chr20 34680735 + TGM3 chr20 2290303 + Exonic hg19 HNSC TCGA-CN-4733 7 20 5'UTR-CDS Intra-chr q11.23 p13 Tumor suppressor gene Seq+ 30478 ChimerSeq STARFusion TCGA_RNA-Seq CHP1-IGHA1 CHP1 chr15 41523545 + IGHA1 chr14 106175001 - Exonic hg19 HNSC TCGA-CN-4733 10 1 Out-of-frame Inter-chr q15.1 30479 ChimerSeq STARFusion TCGA_RNA-Seq COL5A1-IGLC2 COL5A1 chr9 137734937 + IGLC2 chr22 23241800 + Exonic hg19 HNSC TCGA-CN-4733 9 2 Out-of-frame Inter-chr q34.3 q11.22 30480 ChimerSeq STARFusion TCGA_RNA-Seq COL5A1-IGLJ2 COL5A1 chr9 137734937 + IGLJ2 chr22 23241800 + Exonic hg19 HNSC TCGA-CN-4733 9 1 Out-of-frame Inter-chr q34.3 q11.22 30481 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB2-IGKC DNAJB2 chr2 220151425 + IGKC chr2 89156807 - Exonic hg19 HNSC TCGA-CN-4733 9 1 Out-of-frame Intra-chr q35 p11.2 30482 ChimerSeq STARFusion TCGA_RNA-Seq CHP1-IGHG1 CHP1 chr15 41523544 + IGHG1 chr14 106237743 - Exonic hg19 HNSC TCGA-CN-4733 7 1 Out-of-frame Inter-chr q15.1 q32.33 30483 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-TGM3 EPB41L1 chr20 34679797 + TGM3 chr20 2290303 + Exonic hg19 HNSC TCGA-CN-4733 2 20 5'UTR-CDS Intra-chr q11.23 p13 Tumor suppressor gene Seq+ 30484 ChimerSeq STARFusion TCGA_RNA-Seq SCAF1-FLT3LG SCAF1 chr19 50156962 + FLT3LG chr19 49982166 + Exonic hg19 HNSC TCGA-CN-4731 14 56 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 30485 ChimerSeq STARFusion TCGA_RNA-Seq PPP3CC-PIWIL2 PPP3CC chr8 22333137 + PIWIL2 chr8 22138633 + Exonic hg19 HNSC TCGA-CN-4731 5 31 In-Frame Intra-chr p21.3 Tumor suppressor gene p21.3 Tumor suppressor gene Seq+ 30486 ChimerSeq STARFusion TCGA_RNA-Seq WDR82-NT5DC2 WDR82 chr3 52321849 - NT5DC2 chr3 52563350 - Exonic hg19 HNSC TCGA-CN-4731 5 29 5'UTR-CDS Intra-chr p21.2 p21.1 Seq+ 30487 ChimerSeq STARFusion TCGA_RNA-Seq PQLC2-PTBP1 PQLC2 chr1 19652862 + PTBP1 chr19 811932 + Exonic hg19 HNSC TCGA-CN-4731 8 1 Out-of-frame Inter-chr p36.13 p13.3 30488 ChimerSeq STARFusion TCGA_RNA-Seq SLC3A2-GNG3 SLC3A2 chr11 62623853 + GNG3 chr11 62475172 + Exonic hg19 HNSC TCGA-CN-4731 4 6 CDS-5'UTR Intra-chr q12.3 q12.3 Seq+ 30489 ChimerSeq STARFusion TCGA_RNA-Seq FLT3LG-ALDH16A1 FLT3LG chr19 49979823 + ALDH16A1 chr19 49961743 + Exonic hg19 HNSC TCGA-CN-4736 9 15 In-Frame Intra-chr q13.33 q13.33 Seq+ 30490 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K5-ARFIP1 MAP3K5 chr6 137112848 - ARFIP1 chr4 153793604 + Exonic hg19 HNSC TCGA-CN-4736 3 17 In-Frame Inter-chr q23.3 STE:STE11 q31.3 Seq+ 30491 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D12-HELLS TBC1D12 chr10 96201776 + HELLS chr10 96347986 + Exonic hg19 HNSC TCGA-CN-4737 4 15 In-Frame Intra-chr q23.33 q23.33 Seq+ 30492 ChimerSeq STARFusion TCGA_RNA-Seq KRT16-KIF13B KRT16 chr17 39767891 - KIF13B chr8 29005037 - Exonic hg19 HNSC TCGA-CN-4734 8 0 Out-of-frame Inter-chr q21.2 p12 30493 ChimerSeq STARFusion TCGA_RNA-Seq CDC42BPB-SMEK1 CDC42BPB chr14 103470265 - SMEK1 chr14 91927951 - Exonic hg19 HNSC TCGA-CN-4735 10 36 Out-of-frame Intra-chr q32.32 Seq+ 30494 ChimerSeq STARFusion TCGA_RNA-Seq PON3-IGH@ PON3 chr7 94994532 - IGH@ chr14 106330471 - Exonic hg19 HNSC TCGA-CN-4735 7 1 Out-of-frame Inter-chr q21.3 32.33 30495 ChimerSeq STARFusion TCGA_RNA-Seq PSD3-ANO1 PSD3 chr8 18725184 - ANO1 chr11 69933858 + Exonic hg19 HNSC TCGA-CN-4735 2 6 Out-of-frame Inter-chr p22 q13.3 Seq+ 30496 ChimerSeq STARFusion TCGA_RNA-Seq TLE3-THAP10 TLE3 chr15 70386871 - THAP10 chr15 71175247 - Exonic hg19 HNSC TCGA-CN-4738 20 55 In-Frame Intra-chr q23 q23 Transcription factor Seq+ 30497 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D2-GABBR2 TBC1D2 chr9 100991234 - GABBR2 chr9 101258796 - Exonic hg19 HNSC TCGA-CN-4739 2 18 In-Frame Intra-chr q22.33 q22.33 Seq+ 30498 ChimerSeq STARFusion TCGA_RNA-Seq IGHA1-IVL IGHA1 chr14 106174428 - IVL chr1 152882383 + Exonic hg19 HNSC TCGA-CN-4739 3 9 Out-of-frame Inter-chr q21.3 30499 ChimerSeq STARFusion TCGA_RNA-Seq GNRHR2-S100A13 GNRHR2 chr1 145515189 - S100A13 chr1 153591514 - Exonic hg19 HNSC TCGA-TN-A7HJ 4 11 3'UTR-CDS Intra-chr q21.1 q21.3 Seq+ 30500 ChimerSeq STARFusion TCGA_RNA-Seq HMGA2-MSRB3 HMGA2 chr12 66232349 + MSRB3 chr12 65881784 + Exonic hg19 HNSC TCGA-CR-6478 21 89 CDS-3'UTR Intra-chr q14.3 Transcription factor q14.3 Seq+ 30501 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD39-FAM178B ANKRD39 chr2 97523625 - FAM178B chr2 97568444 - Exonic hg19 HNSC TCGA-CR-6478 16 94 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 30502 ChimerSeq STARFusion TCGA_RNA-Seq TMBIM4-TMEM131 TMBIM4 chr12 66563635 - TMEM131 chr2 98430851 - Exonic hg19 HNSC TCGA-CR-6478 10 96 Out-of-frame Inter-chr q14.3 q11.2 Seq+ 30503 ChimerSeq STARFusion TCGA_RNA-Seq TMBIM4-TMEM131 TMBIM4 chr12 66563635 - TMEM131 chr2 98430851 - Exonic hg19 HNSC TCGA-CR-6478 10 96 Out-of-frame Inter-chr q14.3 q11.2 Seq+ 30504 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD39-FAM178B ANKRD39 chr2 97520075 - FAM178B chr2 97568444 - Exonic hg19 HNSC TCGA-CR-6478 8 90 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 30505 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD39-FAM178B ANKRD39 chr2 97520075 - FAM178B chr2 97559788 - Exonic hg19 HNSC TCGA-CR-6478 7 90 In-Frame Intra-chr q11.2 q11.2 Seq+ 30506 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD23-FAM178B ANKRD23 chr2 97523625 - FAM178B chr2 97568444 - Exonic hg19 HNSC TCGA-CR-6478 16 43 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 30507 ChimerSeq STARFusion TCGA_RNA-Seq KIF21A-TSPAN8 KIF21A chr12 39836729 - TSPAN8 chr12 71551567 - Exonic hg19 HNSC TCGA-CR-6478 16 42 CDS-5'UTR Intra-chr q12 q21.1 Seq+ 30508 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD39-FAM178B ANKRD39 chr2 97520075 - FAM178B chr2 97544230 - Exonic hg19 HNSC TCGA-CR-6478 2 92 In-Frame Intra-chr q11.2 q11.2 Seq+ 30509 ChimerSeq STARFusion TCGA_RNA-Seq GPI-EYS GPI chr19 34887335 + EYS chr6 65767620 - Exonic hg19 HNSC TCGA-CR-6478 9 55 In-Frame Inter-chr q12 Seq+ 30510 ChimerSeq STARFusion TCGA_RNA-Seq RMND5A-IGKC RMND5A chr2 86968140 + IGKC chr2 89160768 - Exonic hg19 HNSC TCGA-CR-6478 19 1 Out-of-frame Intra-chr p11.2 p11.2 30511 ChimerSeq STARFusion TCGA_RNA-Seq HSD17B12-TP53I11 HSD17B12 chr11 43837941 + TP53I11 chr11 44960741 - Exonic hg19 HNSC TCGA-CR-6478 4 13 CDS-5'UTR Intra-chr p11.2 p11.2 Seq+ 30512 ChimerSeq STARFusion TCGA_RNA-Seq TFB2M-SMYD3 TFB2M chr1 246727648 - SMYD3 chr1 246498776 - Exonic hg19 HNSC TCGA-CR-6474 34 97 In-Frame Intra-chr q44 q44 Transcription factor Seq+ 30513 ChimerSeq STARFusion TCGA_RNA-Seq MVP-ZNF267 MVP chr16 29842394 + ZNF267 chr16 31925797 + Exonic hg19 HNSC TCGA-CR-6474 15 53 Out-of-frame Intra-chr p11.2 p11.2 Transcription factor Seq+ 30514 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1739325 + Exonic hg19 HNSC TCGA-CR-6473 270 1763 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 30515 ChimerSeq STARFusion TCGA_RNA-Seq ACAT2-IGHG2 ACAT2 chr6 160183155 + IGHG2 chr14 106111130 - Exonic hg19 HNSC TCGA-CR-6470 54 1 Out-of-frame Inter-chr q25.3 30516 ChimerSeq STARFusion TCGA_RNA-Seq PKD1P5-IGL@ PKD1P5 chr16 18479159 - IGL@ chr22 23248511 + Exonic hg19 HNSC TCGA-CR-6470 53 1 Out-of-frame Inter-chr p12.3 q11.22 30517 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525073 - IGHG1 chr14 106209411 - Exonic hg19 HNSC TCGA-CR-6470 38 0 Out-of-frame Inter-chr q34 Oncogene q32.33 30518 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525073 - IGHG1 chr14 106237746 - Exonic hg19 HNSC TCGA-CR-6470 33 0 Out-of-frame Inter-chr q34 Oncogene q32.33 30519 ChimerSeq STARFusion TCGA_RNA-Seq ACAT2-IGHG2 ACAT2 chr6 160183155 + IGHG2 chr14 106209411 - Exonic hg19 HNSC TCGA-CR-6470 25 1 Out-of-frame Inter-chr q25.3 30520 ChimerSeq STARFusion TCGA_RNA-Seq PKD1P5-IGL@ PKD1P5 chr16 18479159 - IGL@ chr22 23243155 + Exonic hg19 HNSC TCGA-CR-6470 20 1 Out-of-frame Inter-chr p12.3 q11.22 30521 ChimerSeq STARFusion TCGA_RNA-Seq SEC23B-IGH@ SEC23B chr20 18488375 + IGH@ chr14 106330467 - Exonic hg19 HNSC TCGA-CR-6470 19 2 Out-of-frame Inter-chr p11.23 32.33 30522 ChimerSeq STARFusion TCGA_RNA-Seq SEC23B-IGH@ SEC23B chr20 18488375 + IGH@ chr14 106330066 - Exonic hg19 HNSC TCGA-CR-6470 17 2 Out-of-frame Inter-chr p11.23 32.33 30523 ChimerSeq STARFusion TCGA_RNA-Seq MACF1-IGKC MACF1 chr1 39934348 + IGKC chr2 89161434 - Exonic hg19 HNSC TCGA-CR-6470 9 1 Out-of-frame Inter-chr p34.3 p11.2 30524 ChimerSeq STARFusion TCGA_RNA-Seq PGAP2-IGHG2 PGAP2 chr11 3832574 + IGHG2 chr14 106111129 - Exonic hg19 HNSC TCGA-CR-6470 9 1 Out-of-frame Inter-chr p15.4 30525 ChimerSeq STARFusion TCGA_RNA-Seq GGT7-IGHG1 GGT7 chr20 33451183 - IGHG1 chr14 106209409 - Exonic hg19 HNSC TCGA-CR-6470 7 1 Out-of-frame Inter-chr q11.22 q32.33 30526 ChimerSeq STARFusion TCGA_RNA-Seq GJB2-IGL@ GJB2 chr13 20763468 - IGL@ chr22 23247171 + Exonic hg19 HNSC TCGA-CR-6470 7 1 Out-of-frame Inter-chr q12.11 Tumor suppressor gene q11.22 30527 ChimerSeq STARFusion TCGA_RNA-Seq ABCC5-OR4G3P ABCC5 chr3 183677521 - OR4G3P chr19 94892 + Exonic hg19 HNSC TCGA-CX-7082 65 163 Out-of-frame Inter-chr q27.1 p13.3 30528 ChimerSeq STARFusion TCGA_RNA-Seq EIF2S2-LETM2 EIF2S2 chr20 32699902 - LETM2 chr8 38245468 + Exonic hg19 HNSC TCGA-CX-7082 9 19 CDS-5'UTR Inter-chr q11.22 p11.23 Seq+ 30529 ChimerSeq STARFusion TCGA_RNA-Seq DLG1-HRG DLG1 chr3 196831774 - HRG chr3 186391697 + Exonic hg19 HNSC TCGA-CX-7082 5 25 Out-of-frame Intra-chr q29 Tumor suppressor gene q27.3 Tumor suppressor gene Seq+ 30530 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3B-NAALADL2 FNDC3B chr3 172098883 + NAALADL2 chr3 174176304 + Exonic hg19 HNSC TCGA-CX-7082 3 20 CDS-5'UTR Intra-chr q26.31 q26.31 Seq+ 30531 ChimerSeq STARFusion TCGA_RNA-Seq PTRH2-VMP1 PTRH2 chr17 57784732 - VMP1 chr17 57886157 + Exonic hg19 HNSC TCGA-CX-7086 59 6 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 30532 ChimerSeq STARFusion TCGA_RNA-Seq VMP1-PTRH2 VMP1 chr17 57785109 + PTRH2 chr17 57775339 - Exonic hg19 HNSC TCGA-CX-7086 6 46 5'UTR-5'UTR Intra-chr q23.1 q23.1 Seq+ 30533 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D10A-POLR3H TBC1D10A chr22 30695433 - POLR3H chr22 41936799 - Exonic hg19 HNSC TCGA-CX-7086 8 20 In-Frame Intra-chr q12.2 q13.2 Seq+ 30534 ChimerSeq STARFusion TCGA_RNA-Seq IL20RB-NCK1 IL20RB chr3 136714398 + NCK1 chr3 136646826 + Exonic hg19 HNSC TCGA-CX-7086 8 15 CDS-5'UTR Intra-chr q22.3 q22.3 Seq+ 30535 ChimerSeq STARFusion TCGA_RNA-Seq SOGA1-NDRG3 SOGA1 chr20 35491061 - NDRG3 chr20 35294795 - Exonic hg19 HNSC TCGA-CX-7086 3 25 In-Frame Intra-chr q11.23 q11.23 30536 ChimerSeq STARFusion TCGA_RNA-Seq CBX7-VPREB1 CBX7 chr22 39545794 - VPREB1 chr22 22599358 + Exonic hg19 HNSC TCGA-CX-7086 4 14 Out-of-frame Intra-chr q13.1 q11.22 Seq+ 30537 ChimerSeq STARFusion TCGA_RNA-Seq BCR-UPB1 BCR chr22 23524426 + UPB1 chr22 24890077 + Exonic hg19 HNSC TCGA-CX-7086 2 14 CDS-5'UTR Intra-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q11.23 Seq+ 30538 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-SUPT5H IGL@ chr22 22753227 + SUPT5H chr19 39944105 + Exonic hg19 HNSC TCGA-CX-7085 15 0 Out-of-frame Inter-chr q11.22 q13.2 30539 ChimerSeq STARFusion TCGA_RNA-Seq MVP-IGL@ MVP chr16 29852931 + IGL@ chr22 23247175 + Exonic hg19 HNSC TCGA-CX-7085 13 1 Out-of-frame Inter-chr p11.2 q11.22 30540 ChimerSeq STARFusion TCGA_RNA-Seq UBE2Z-IGL@ UBE2Z chr17 47000309 + IGL@ chr22 23247168 + Exonic hg19 HNSC TCGA-CX-7085 7 3 Out-of-frame Inter-chr q21.32 q11.22 30541 ChimerSeq STARFusion TCGA_RNA-Seq UBE2Z-IGLC3 UBE2Z chr17 47000309 + IGLC3 chr22 23247168 + Exonic hg19 HNSC TCGA-CX-7085 7 1 Out-of-frame Inter-chr q21.32 q11.22 30542 ChimerSeq STARFusion TCGA_RNA-Seq UBE2Z-IGLJ3 UBE2Z chr17 47000309 + IGLJ3 chr22 23247168 + Exonic hg19 HNSC TCGA-CX-7085 7 1 Out-of-frame Inter-chr q21.32 q11.22 30543 ChimerSeq STARFusion TCGA_RNA-Seq NLRC5-CYB5B NLRC5 chr16 57051100 + CYB5B chr16 69492996 + Exonic hg19 HNSC TCGA-D6-8568 15 62 5'UTR-CDS Intra-chr q13 q22.1 Seq+ 30544 ChimerSeq STARFusion TCGA_RNA-Seq PXDN-IGL@ PXDN chr2 1652514 - IGL@ chr22 23241798 + Exonic hg19 HNSC TCGA-D6-8568 4 1 Out-of-frame Inter-chr p25.3 q11.22 30545 ChimerSeq STARFusion TCGA_RNA-Seq ITGB6-RBMS1 ITGB6 chr2 161051880 - RBMS1 chr2 161174738 - Exonic hg19 HNSC TCGA-D6-8568 2 8 In-Frame Intra-chr q24.2 q24.2 Seq+ 30546 ChimerSeq STARFusion TCGA_RNA-Seq COL5A1-SPATA31D3 COL5A1 chr9 137664680 + SPATA31D3 chr9 84561383 + Exonic hg19 HNSC TCGA-D6-8569 10 38 Out-of-frame Intra-chr q34.3 q21.32 Seq+ 30547 ChimerSeq STARFusion TCGA_RNA-Seq COL5A1-SPATA31D3 COL5A1 chr9 137664680 + SPATA31D3 chr9 84546291 + Exonic hg19 HNSC TCGA-D6-8569 6 38 Out-of-frame Intra-chr q34.3 q21.32 Seq+ 30548 ChimerSeq STARFusion TCGA_RNA-Seq CAMSAP1-SDCCAG3 CAMSAP1 chr9 138798846 - SDCCAG3 chr9 139302390 - Exonic hg19 HNSC TCGA-D6-8569 4 23 In-Frame Intra-chr q34.3 q34.3 Seq+ 30549 ChimerSeq STARFusion TCGA_RNA-Seq NAV2-USB1 NAV2 chr11 20142993 + USB1 chr16 58054472 + Exonic hg19 HNSC TCGA-D6-8569 8 0 Out-of-frame Inter-chr p15.1 q21 30550 ChimerSeq STARFusion TCGA_RNA-Seq RXRA-PRRC2B RXRA chr9 137313651 + PRRC2B chr9 134305477 + Exonic hg19 HNSC TCGA-D6-8569 2 9 CDS-5'UTR Intra-chr q34.2 Transcription factor q34.13 Seq+ 30551 ChimerSeq STARFusion TCGA_RNA-Seq RB1-HTR2C RB1 chr13 48881542 + HTR2C chrX 114141152 + Exonic hg19 HNSC TCGA-D6-6827 5 28 Out-of-frame Inter-chr q14.2 Oncogene Tumor suppressor gene q23 Seq+ 30552 ChimerSeq STARFusion TCGA_RNA-Seq USPL1-RB1 USPL1 chr13 31192193 + RB1 chr13 48916735 + Exonic hg19 HNSC TCGA-D6-6827 4 5 5'UTR-CDS Intra-chr q12.3 q14.2 Oncogene Tumor suppressor gene Seq+ 30553 ChimerSeq STARFusion TCGA_RNA-Seq VGLL4-CHL1 VGLL4 chr3 11643307 - CHL1 chr3 419501 + Exonic hg19 HNSC TCGA-D6-6826 11 102 In-Frame Intra-chr p25.2 p26.3 Seq+ 30554 ChimerSeq STARFusion TCGA_RNA-Seq VGLL4-CHL1 VGLL4 chr3 11643307 - CHL1 chr3 407633 + Exonic hg19 HNSC TCGA-D6-6826 8 102 Out-of-frame Intra-chr p25.2 p26.3 Seq+ 30555 ChimerSeq STARFusion TCGA_RNA-Seq KRT6A-IGH@ KRT6A chr12 52882111 - IGH@ chr14 106208311 - Exonic hg19 HNSC TCGA-D6-6826 3 35 Out-of-frame Inter-chr q13.13 32.33 30556 ChimerSeq STARFusion TCGA_RNA-Seq RPSAP52-HMGA2 RPSAP52 chr12 66220623 - HMGA2 chr12 66221781 + Exonic hg19 HNSC TCGA-D6-6826 3 21 3'UTR-CDS Intra-chr q14.3 q14.3 Transcription factor 30557 ChimerSeq STARFusion TCGA_RNA-Seq KRT6A-IGHG1 KRT6A chr12 52882111 - IGHG1 chr14 106208311 - Exonic hg19 HNSC TCGA-D6-6826 3 12 Out-of-frame Inter-chr q13.13 q32.33 30558 ChimerSeq STARFusion TCGA_RNA-Seq CD46-IGKC CD46 chr1 207934740 + IGKC chr2 89161073 - Exonic hg19 HNSC TCGA-CR-5250 10 1 Out-of-frame Inter-chr q32.2 p11.2 30559 ChimerSeq STARFusion TCGA_RNA-Seq SMAD4-IGHG1 SMAD4 chr18 48556645 + IGHG1 chr14 106209406 - Exonic hg19 HNSC TCGA-CR-5250 7 1 Out-of-frame Inter-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q32.33 30560 ChimerSeq STARFusion TCGA_RNA-Seq ERGIC1-IGHG3 ERGIC1 chr5 172261429 + IGHG3 chr14 106331652 - Exonic hg19 HNSC TCGA-CR-5250 6 1 Out-of-frame Inter-chr q35.1 30561 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-NOTCH1 IGHG1 chr14 106134591 - NOTCH1 chr9 139403429 - Exonic hg19 HNSC TCGA-CR-5250 5 3 Out-of-frame Inter-chr q32.33 q34.3 Oncogene Tumor suppressor gene 30562 ChimerSeq STARFusion TCGA_RNA-Seq RASA4-TAF6 RASA4 chr7 102240307 - TAF6 chr7 99711891 - Exonic hg19 HNSC TCGA-CR-5250 3 5 Out-of-frame Intra-chr q22.1 q22.1 30563 ChimerSeq STARFusion TCGA_RNA-Seq FLJ27365-SCUBE1 FLJ27365 chr22 46499129 + SCUBE1 chr22 43735241 - Exonic hg19 HNSC TCGA-CN-6020 7 39 Out-of-frame Intra-chr q13.2 30564 ChimerSeq STARFusion TCGA_RNA-Seq FLJ27365-SCUBE1 FLJ27365 chr22 46494438 + SCUBE1 chr22 43735241 - Exonic hg19 HNSC TCGA-CN-6020 4 39 Out-of-frame Intra-chr q13.2 30565 ChimerSeq STARFusion TCGA_RNA-Seq RHOC-ZNF469 RHOC chr1 113246415 - ZNF469 chr16 88506662 + Exonic hg19 HNSC TCGA-CN-6020 5 2 Out-of-frame Inter-chr p13.2 q24.2 Transcription factor 30566 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106209410 - Exonic hg19 HNSC TCGA-CN-6021 37 5 Out-of-frame Inter-chr q24.2 32.33 30567 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHG1 SLC7A5 chr16 87868137 - IGHG1 chr14 106209410 - Exonic hg19 HNSC TCGA-CN-6021 37 3 Out-of-frame Inter-chr q24.2 q32.33 30568 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106237745 - Exonic hg19 HNSC TCGA-CN-6021 26 5 Out-of-frame Inter-chr q24.2 32.33 30569 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHG1 SLC7A5 chr16 87868137 - IGHG1 chr14 106237745 - Exonic hg19 HNSC TCGA-CN-6021 26 3 Out-of-frame Inter-chr q24.2 q32.33 30570 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106136184 - Exonic hg19 HNSC TCGA-CN-6021 23 5 Out-of-frame Inter-chr q24.2 32.33 30571 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106092405 - Exonic hg19 HNSC TCGA-CN-6021 15 5 Out-of-frame Inter-chr q24.2 32.33 30572 ChimerSeq STARFusion TCGA_RNA-Seq PORCN-IGH@ PORCN chrX 48370380 + IGH@ chr14 106209410 - Exonic hg19 HNSC TCGA-CN-6021 10 1 Out-of-frame Inter-chr p11.23 32.33 30573 ChimerSeq STARFusion TCGA_RNA-Seq PORCN-IGHG1 PORCN chrX 48370380 + IGHG1 chr14 106209410 - Exonic hg19 HNSC TCGA-CN-6021 10 1 Out-of-frame Inter-chr p11.23 q32.33 30574 ChimerSeq STARFusion TCGA_RNA-Seq PORCN-IGH@ PORCN chrX 48370380 + IGH@ chr14 106237745 - Exonic hg19 HNSC TCGA-CN-6021 9 1 Out-of-frame Inter-chr p11.23 32.33 30575 ChimerSeq STARFusion TCGA_RNA-Seq PORCN-IGHG1 PORCN chrX 48370380 + IGHG1 chr14 106237745 - Exonic hg19 HNSC TCGA-CN-6021 9 1 Out-of-frame Inter-chr p11.23 q32.33 30576 ChimerSeq STARFusion TCGA_RNA-Seq PORCN-IGH@ PORCN chrX 48370380 + IGH@ chr14 106111129 - Exonic hg19 HNSC TCGA-CN-6021 7 1 Out-of-frame Inter-chr p11.23 32.33 30577 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ASXL1 IGH@ chr14 107034730 - ASXL1 chr20 31021710 + Exonic hg19 HNSC TCGA-CN-6021 6 1 Out-of-frame Inter-chr 32.33 q11.21 Oncogene Tumor suppressor gene 30578 ChimerSeq STARFusion TCGA_RNA-Seq PORCN-IGH@ PORCN chrX 48370380 + IGH@ chr14 106092405 - Exonic hg19 HNSC TCGA-CN-6021 6 1 Out-of-frame Inter-chr p11.23 32.33 30579 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106111129 - Exonic hg19 HNSC TCGA-CN-6021 5 4 Out-of-frame Inter-chr q24.2 32.33 30580 ChimerSeq STARFusion TCGA_RNA-Seq FAT1-MTNR1A FAT1 chr4 187627717 - MTNR1A chr4 187455711 - Exonic hg19 HNSC TCGA-CN-6022 21 49 In-Frame Intra-chr q35.2 Tumor suppressor gene q35.2 30581 ChimerSeq STARFusion TCGA_RNA-Seq TMSB4X-IGH@ TMSB4X chrX 12993806 + IGH@ chr14 106330467 - Exonic hg19 HNSC TCGA-CN-6023 41 5 Out-of-frame Inter-chr p22.2 32.33 30582 ChimerSeq STARFusion TCGA_RNA-Seq TMSB4X-IGHG3 TMSB4X chrX 12993806 + IGHG3 chr14 106330467 - Exonic hg19 HNSC TCGA-CN-6023 41 1 Out-of-frame Inter-chr p22.2 30583 ChimerSeq STARFusion TCGA_RNA-Seq FAM83H-IGH@ FAM83H chr8 144811133 - IGH@ chr14 106330465 - Exonic hg19 HNSC TCGA-CN-6023 9 3 Out-of-frame Inter-chr 32.33 30584 ChimerSeq STARFusion TCGA_RNA-Seq SPEN-C1orf64 SPEN chr1 16174645 + C1orf64 chr1 16332414 + Exonic hg19 HNSC TCGA-CN-6024 31 77 Out-of-frame Intra-chr p36.21 Transcription factor p36.13 Seq+ 30585 ChimerSeq STARFusion TCGA_RNA-Seq CBFA2T2-HM13 CBFA2T2 chr20 32078107 + HM13 chr20 30132750 + Exonic hg19 HNSC TCGA-CN-6024 9 28 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 30586 ChimerSeq STARFusion TCGA_RNA-Seq ATF7-KRT83 ATF7 chr12 53917060 - KRT83 chr12 52715094 - Exonic hg19 HNSC TCGA-CN-6024 4 10 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 30587 ChimerSeq STARFusion TCGA_RNA-Seq LRP5-CLPB LRP5 chr11 68080273 + CLPB chr11 72070052 - Exonic hg19 HNSC TCGA-CV-7418 18 30 In-Frame Intra-chr q13.2 q13.4 Seq+ 30588 ChimerSeq STARFusion TCGA_RNA-Seq PSMB4-SEC22B PSMB4 chr1 151372203 + SEC22B chr1 145109524 + Exonic hg19 HNSC TCGA-CV-7418 5 28 In-Frame Intra-chr q21.3 p12 30589 ChimerSeq STARFusion TCGA_RNA-Seq LRP5-CLPB LRP5 chr11 68080273 + CLPB chr11 72084058 - Exonic hg19 HNSC TCGA-CV-7418 4 27 In-Frame Intra-chr q13.2 q13.4 Seq+ 30590 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-SPEF2 NIPBL chr5 36958333 + SPEF2 chr5 35753726 + Exonic hg19 HNSC TCGA-CV-7418 6 15 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 30591 ChimerSeq STARFusion TCGA_RNA-Seq FOXK2-FN3KRP FOXK2 chr17 80540810 + FN3KRP chr17 80684356 + Exonic hg19 HNSC TCGA-CV-7418 4 19 Out-of-frame Intra-chr q25.3 Transcription factor q25.3 Seq+ 30592 ChimerSeq STARFusion TCGA_RNA-Seq FOXK2-FN3KRP FOXK2 chr17 80529746 + FN3KRP chr17 80684356 + Exonic hg19 HNSC TCGA-CV-7418 2 19 In-Frame Intra-chr q25.3 Transcription factor q25.3 Seq+ 30593 ChimerSeq STARFusion TCGA_RNA-Seq POU2F1-CNTNAP3 POU2F1 chr1 167382351 + CNTNAP3 chr9 39118256 - Exonic hg19 HNSC TCGA-CV-7418 3 6 In-Frame Inter-chr q24.2 Transcription factor p12 30594 ChimerSeq STARFusion TCGA_RNA-Seq KPNA4-IFT80 KPNA4 chr3 160283002 - IFT80 chr3 160102434 - Exonic hg19 HNSC TCGA-CV-7413 7 21 CDS-5'UTR Intra-chr q25.33 q25.33 Seq+ 30595 ChimerSeq STARFusion TCGA_RNA-Seq SUPT7L-RBKS SUPT7L chr2 27883851 - RBKS chr2 28004655 - Exonic hg19 HNSC TCGA-CV-7413 5 9 Out-of-frame Intra-chr p23.3 p23.2 Seq+ 30596 ChimerSeq STARFusion TCGA_RNA-Seq LPP-CLSTN2 LPP chr3 187943315 + CLSTN2 chr3 140251166 + Exonic hg19 HNSC TCGA-CV-7410 7 30 5'UTR-CDS Intra-chr q27.3 Oncogene q23 Seq+ 30597 ChimerSeq STARFusion TCGA_RNA-Seq ITGAL-KRT14 ITGAL chr16 30531249 + KRT14 chr17 39743147 - Exonic hg19 HNSC TCGA-CV-7410 10 1 CDS-5'UTR Inter-chr p11.2 q21.2 30598 ChimerSeq STARFusion TCGA_RNA-Seq S100A9-KRT17 S100A9 chr1 153333416 + KRT17 chr17 39780387 - Exonic hg19 HNSC TCGA-CV-7411 5 137 Out-of-frame Inter-chr q21.3 q21.2 30599 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-KRT14 MYH9 chr22 36691036 - KRT14 chr17 39739692 - Exonic hg19 HNSC TCGA-CV-7411 5 40 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene q21.2 30600 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-KRT16 ACTB chr7 5569210 - KRT16 chr17 39766489 - Exonic hg19 HNSC TCGA-CV-7411 3 46 Out-of-frame Inter-chr p22.1 q21.2 30601 ChimerSeq STARFusion TCGA_RNA-Seq KRT16-KIF13B KRT16 chr17 39767889 - KIF13B chr8 29005035 - Exonic hg19 HNSC TCGA-CV-7411 9 1 Out-of-frame Inter-chr q21.2 p12 30602 ChimerSeq STARFusion TCGA_RNA-Seq SLC19A1-KRT4 SLC19A1 chr21 46951572 - KRT4 chr12 53207608 - Exonic hg19 HNSC TCGA-CV-7416 10 2 Out-of-frame Inter-chr q22.3 q13.13 30603 ChimerSeq STARFusion TCGA_RNA-Seq RPL8-KRT13 RPL8 chr8 146015274 - KRT13 chr17 39657474 - Exonic hg19 HNSC TCGA-CV-7416 3 23 Out-of-frame Inter-chr q24.3 q21.2 30604 ChimerSeq STARFusion TCGA_RNA-Seq KRT5-NDRG1 KRT5 chr12 52908844 - NDRG1 chr8 134296519 - Exonic hg19 HNSC TCGA-CV-7414 3 41 Out-of-frame Inter-chr q13.13 q24.22 Tumor suppressor gene 30605 ChimerSeq STARFusion TCGA_RNA-Seq PIK3R3-ZSWIM5 PIK3R3 chr1 46597519 - ZSWIM5 chr1 45553909 - Exonic hg19 HNSC TCGA-CV-7414 2 15 In-Frame Intra-chr p34.1 p34.1 Seq+ 30606 ChimerSeq STARFusion TCGA_RNA-Seq SMARCA2-DMRT1 SMARCA2 chr9 2088613 + DMRT1 chr9 916763 + Exonic hg19 HNSC TCGA-CV-7415 4 28 In-Frame Intra-chr p24.3 Tumor suppressor gene p24.3 Transcription factor Seq+ 30607 ChimerSeq STARFusion TCGA_RNA-Seq COL1A1-KRT16 COL1A1 chr17 48266835 - KRT16 chr17 39767684 - Exonic hg19 HNSC TCGA-CV-7415 3 31 Out-of-frame Intra-chr q21.33 Oncogene q21.2 30608 ChimerSeq STARFusion TCGA_RNA-Seq GLTSCR1-ZNF793 GLTSCR1 chr19 48177019 + ZNF793 chr19 38039264 + Exonic hg19 HNSC TCGA-CV-7415 6 15 CDS-3'UTR Intra-chr Tumor suppressor gene q13.12 Transcription factor Seq+ 30609 ChimerSeq STARFusion TCGA_RNA-Seq KRT16-LGALS3BP KRT16 chr17 39766094 - LGALS3BP chr17 76968087 - Exonic hg19 HNSC TCGA-CV-7415 3 8 Out-of-frame Intra-chr q21.2 q25.3 30610 ChimerSeq STARFusion TCGA_RNA-Seq NEAT1-CNIH2 NEAT1 chr11 65191485 + CNIH2 chr11 66050506 + Exonic hg19 HNSC TCGA-RS-A6TO 88 150 5'UTR-CDS Intra-chr q13.1 q13.2 Seq+ 30611 ChimerSeq STARFusion TCGA_RNA-Seq IPPK-IARS IPPK chr9 95432190 - IARS chr9 95019082 - Exonic hg19 HNSC TCGA-RS-A6TO 2 19 In-Frame Intra-chr q22.31 q22.31 Seq+ 30612 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-TCEA1 WHSC1L1 chr8 38162105 - TCEA1 chr8 54883023 - Exonic hg19 HNSC TCGA-KU-A66T 97 325 Out-of-frame Intra-chr p11.23 Tumor suppressor gene q11.23 Seq+ 30613 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-TCEA1 WHSC1L1 chr8 38162203 - TCEA1 chr8 54883023 - Exonic hg19 HNSC TCGA-KU-A66T 15 325 Out-of-frame Intra-chr p11.23 Tumor suppressor gene q11.23 Seq+ 30614 ChimerSeq STARFusion TCGA_RNA-Seq KDM5C-HUWE1 KDM5C chrX 53245256 - HUWE1 chrX 53707139 - Exonic hg19 HNSC TCGA-KU-A66T 44 201 CDS-5'UTR Intra-chr p11.22 Oncogene p11.22 Seq+ 30615 ChimerSeq STARFusion TCGA_RNA-Seq SLX4IP-MKKS SLX4IP chr20 10416101 + MKKS chr20 10389451 - Exonic hg19 HNSC TCGA-KU-A66T 11 38 Out-of-frame Intra-chr p12.2 p12.2 30616 ChimerSeq STARFusion TCGA_RNA-Seq MYO1B-NCKAP1 MYO1B chr2 192110352 + NCKAP1 chr2 183829536 - Exonic hg19 HNSC TCGA-KU-A66T 5 17 5'UTR-CDS Intra-chr q32.3 q32.1 Seq+ 30617 ChimerSeq STARFusion TCGA_RNA-Seq MYO1B-NCKAP1 MYO1B chr2 192110352 + NCKAP1 chr2 183827006 - Exonic hg19 HNSC TCGA-KU-A66T 2 17 5'UTR-CDS Intra-chr q32.3 q32.1 Seq+ 30618 ChimerSeq STARFusion TCGA_RNA-Seq GPD2-NR4A2 GPD2 chr2 157332719 + NR4A2 chr2 157182512 - Exonic hg19 HNSC TCGA-HD-A634 23 170 Out-of-frame Intra-chr q24.1 q24.1 Transcription factor Seq+ 30619 ChimerSeq STARFusion TCGA_RNA-Seq GPD2-NR4A2 GPD2 chr2 157332719 + NR4A2 chr2 157182840 - Exonic hg19 HNSC TCGA-HD-A634 5 164 Out-of-frame Intra-chr q24.1 q24.1 Transcription factor Seq+ 30620 ChimerSeq STARFusion TCGA_RNA-Seq GPD2-NR4A2 GPD2 chr2 157332719 + NR4A2 chr2 157183432 - Exonic hg19 HNSC TCGA-HD-A634 4 164 In-Frame Intra-chr q24.1 q24.1 Transcription factor Seq+ 30621 ChimerSeq STARFusion TCGA_RNA-Seq NR4A2-GPD2 NR4A2 chr2 157187180 - GPD2 chr2 157332610 + Exonic hg19 HNSC TCGA-HD-A634 4 30 5'UTR-5'UTR Intra-chr q24.1 Transcription factor q24.1 Seq+ 30622 ChimerSeq STARFusion TCGA_RNA-Seq NR4A2-GPD2 NR4A2 chr2 157188992 - GPD2 chr2 157332610 + Exonic hg19 HNSC TCGA-HD-A634 2 30 5'UTR-5'UTR Intra-chr q24.1 Transcription factor q24.1 Seq+ 30623 ChimerSeq STARFusion TCGA_RNA-Seq PRSS16-IGKJ3 PRSS16 chr6 27222363 + IGKJ3 chr2 89160771 - Exonic hg19 HNSC TCGA-CV-7254 19 0 Out-of-frame Inter-chr p22.1 p11.2 30624 ChimerSeq STARFusion TCGA_RNA-Seq PRSS16-IGKC PRSS16 chr6 27222363 + IGKC chr2 89160771 - Exonic hg19 HNSC TCGA-CV-7254 18 0 Out-of-frame Inter-chr p22.1 p11.2 30625 ChimerSeq STARFusion TCGA_RNA-Seq RAB3D-DMBT1 RAB3D chr19 11447848 - DMBT1 chr10 124395507 + Exonic hg19 HNSC TCGA-CV-7254 2 9 Out-of-frame Inter-chr p13.2 q26.13 Tumor suppressor gene Seq+ 30626 ChimerSeq STARFusion TCGA_RNA-Seq USP28-TYR USP28 chr11 113723223 - TYR chr11 89017941 + Exonic hg19 HNSC TCGA-CV-7255 3 15 Out-of-frame Intra-chr q23.2 q14.3 30627 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF3-AP1B1 ZNRF3 chr22 29383189 + AP1B1 chr22 29754960 - Exonic hg19 HNSC TCGA-CV-7255 3 9 In-Frame Intra-chr q12.1 q12.2 30628 ChimerSeq STARFusion TCGA_RNA-Seq NCKAP5-LYPD1 NCKAP5 chr2 133887550 - LYPD1 chr2 133403853 - Exonic hg19 HNSC TCGA-CV-7250 4 30 Out-of-frame Intra-chr q21.2 q21.2 30629 ChimerSeq STARFusion TCGA_RNA-Seq SLC19A1-KRT4 SLC19A1 chr21 46951572 - KRT4 chr12 53207608 - Exonic hg19 HNSC TCGA-CV-7252 8 1 Out-of-frame Inter-chr q22.3 q13.13 30630 ChimerSeq STARFusion TCGA_RNA-Seq DHCR24-PCNXL2 DHCR24 chr1 55319710 - PCNXL2 chr1 233314921 - Exonic hg19 HNSC TCGA-CV-7253 107 338 In-Frame Intra-chr p32.3 Seq+ 30631 ChimerSeq STARFusion TCGA_RNA-Seq TOM1L2-ATPAF2 TOM1L2 chr17 17810761 - ATPAF2 chr17 17928018 - Exonic hg19 HNSC TCGA-CV-7253 82 241 In-Frame Intra-chr p11.2 Tumor suppressor gene p11.2 Seq+ 30632 ChimerSeq STARFusion TCGA_RNA-Seq PXN-MSI1 PXN chr12 120659426 - MSI1 chr12 120780908 - Exonic hg19 HNSC TCGA-CV-7253 44 191 CDS-3'UTR Intra-chr q24.23 q24.31 Seq+ 30633 ChimerSeq STARFusion TCGA_RNA-Seq NOL9-DNAJC11 NOL9 chr1 6614167 - DNAJC11 chr1 6741097 - Exonic hg19 HNSC TCGA-CV-7253 7 30 In-Frame Intra-chr p36.31 p36.31 Tumor suppressor gene Seq+ 30634 ChimerSeq STARFusion TCGA_RNA-Seq GRHL2-TRIM13 GRHL2 chr8 102505017 + TRIM13 chr13 50571803 + Exonic hg19 HNSC TCGA-CV-7253 5 24 CDS-5'UTR Inter-chr q22.3 Transcription factor q14.2 Tumor suppressor gene Seq+ 30635 ChimerSeq STARFusion TCGA_RNA-Seq PRIM2-EYS PRIM2 chr6 57372355 + EYS chr6 64431693 - Exonic hg19 HNSC TCGA-CV-7253 3 23 Out-of-frame Intra-chr p11.2 q12 30636 ChimerSeq STARFusion TCGA_RNA-Seq GRHL2-TRIM13 GRHL2 chr8 102505017 + TRIM13 chr13 50586071 + Exonic hg19 HNSC TCGA-CV-7253 2 24 Out-of-frame Inter-chr q22.3 Transcription factor q14.2 Tumor suppressor gene Seq+ 30637 ChimerSeq STARFusion TCGA_RNA-Seq C12orf52-GRHL2 C12orf52 chr12 113624853 + GRHL2 chr8 102555469 + Exonic hg19 HNSC TCGA-CV-7253 4 11 In-Frame Inter-chr Tumor suppressor gene q22.3 Transcription factor Seq+ 30638 ChimerSeq STARFusion TCGA_RNA-Seq KRT5-FTH1 KRT5 chr12 52913746 - FTH1 chr11 61732565 - Exonic hg19 HNSC TCGA-CV-7253 3 9 Out-of-frame Inter-chr q13.13 q12.3 30639 ChimerSeq STARFusion TCGA_RNA-Seq SIL1-DNAJC18 SIL1 chr5 138456724 - DNAJC18 chr5 138749961 - Exonic hg19 HNSC TCGA-CN-A63T 7 13 In-Frame Intra-chr q31.2 q31.2 Seq+ 30640 ChimerSeq STARFusion TCGA_RNA-Seq OCIAD1-GLIPR2 OCIAD1 chr4 48833266 + GLIPR2 chr9 36162359 + Exonic hg19 HNSC TCGA-CN-A63U 15 131 5'UTR-CDS Inter-chr p11 p13.3 Seq+ 30641 ChimerSeq STARFusion TCGA_RNA-Seq PAGR1-KIF22 PAGR1 chr16 29828613 + KIF22 chr16 29814090 + Exonic hg19 HNSC TCGA-CN-A63U 21 97 Out-of-frame Intra-chr p11.2 p11.2 30642 ChimerSeq STARFusion TCGA_RNA-Seq PAGR1-KIF22 PAGR1 chr16 29828613 + KIF22 chr16 29814090 + Exonic hg19 HNSC TCGA-CN-A63U 21 97 Out-of-frame Intra-chr p11.2 p11.2 30643 ChimerSeq STARFusion TCGA_RNA-Seq OCIAD1-GLIPR2 OCIAD1 chr4 48833069 + GLIPR2 chr9 36162359 + Exonic hg19 HNSC TCGA-CN-A63U 2 131 5'UTR-CDS Inter-chr p11 p13.3 Seq+ 30644 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A17-RBX1 SLC25A17 chr22 41188529 - RBX1 chr22 41363803 + Exonic hg19 HNSC TCGA-CN-A63U 12 60 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 30645 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A17-XPNPEP3 SLC25A17 chr22 41188529 - XPNPEP3 chr22 41363803 + Exonic hg19 HNSC TCGA-CN-A63U 12 27 CDS-3'UTR Intra-chr q13.2 q13.2 30646 ChimerSeq STARFusion TCGA_RNA-Seq VCL-ADK VCL chr10 75863686 + ADK chr10 76285014 + Exonic hg19 HNSC TCGA-CN-A63U 3 7 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 30647 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57752204 + VMP1 chr17 57915656 + Exonic hg19 HNSC TCGA-CN-A63V 53 144 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 30648 ChimerSeq STARFusion TCGA_RNA-Seq TRMU-GTSE1 TRMU chr22 46746360 + GTSE1 chr22 46725255 + Exonic hg19 HNSC TCGA-CN-A63W 14 69 In-Frame Intra-chr q13.31 q13.31 Seq+ 30649 ChimerSeq STARFusion TCGA_RNA-Seq PEAK1-LINGO1 PEAK1 chr15 77450845 - LINGO1 chr15 77969516 - Exonic hg19 HNSC TCGA-CN-A63W 3 13 CDS-5'UTR Intra-chr q24.3 q24.3 30650 ChimerSeq STARFusion TCGA_RNA-Seq TBCD-FN3KRP TBCD chr17 80772810 + FN3KRP chr17 80678148 + Exonic hg19 HNSC TCGA-CN-A63W 3 12 Out-of-frame Intra-chr q25.3 Seq+ 30651 ChimerSeq STARFusion TCGA_RNA-Seq STX17-NR4A3 STX17 chr9 102691125 + NR4A3 chr9 102606931 + Exonic hg19 HNSC TCGA-BA-A4IH 10 61 In-Frame Intra-chr q31.1 q31.1 Tumor suppressor gene Transcription factor Seq+ 30652 ChimerSeq STARFusion TCGA_RNA-Seq GSE1-EMC8 GSE1 chr16 85647004 + EMC8 chr16 85822656 - Exonic hg19 HNSC TCGA-BA-A4II 23 113 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 30653 ChimerSeq STARFusion TCGA_RNA-Seq GSE1-EMC8 GSE1 chr16 85647004 + EMC8 chr16 85827017 - Exonic hg19 HNSC TCGA-BA-A4II 4 112 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 30654 ChimerSeq STARFusion TCGA_RNA-Seq MARK2-C11orf84 MARK2 chr11 63668150 + C11orf84 chr11 63594400 + Exonic hg19 HNSC TCGA-BA-A4II 9 90 Out-of-frame Intra-chr q13.1 CAMK:CAMKL q13.1 Seq+ 30655 ChimerSeq STARFusion TCGA_RNA-Seq AKAP9-ANKIB1 AKAP9 chr7 91570461 + ANKIB1 chr7 91924203 + Exonic hg19 HNSC TCGA-BA-A4II 3 10 CDS-5'UTR Intra-chr q21.2 Oncogene q21.2 Seq+ 30656 ChimerSeq STARFusion TCGA_RNA-Seq KLHDC4-CA5A KLHDC4 chr16 87799398 - CA5A chr16 87936126 - Exonic hg19 HNSC TCGA-BA-A4II 2 10 In-Frame Intra-chr q24.2 q24.2 Seq+ 30657 ChimerSeq STARFusion TCGA_RNA-Seq HMGXB3-CAPN1 HMGXB3 chr5 149380742 + CAPN1 chr11 64972154 + Exonic hg19 HNSC TCGA-CN-5355 8 60 5'UTR-5'UTR Inter-chr q32 q13.1 Seq+ 30658 ChimerSeq STARFusion TCGA_RNA-Seq ITGB1BP1-MBOAT2 ITGB1BP1 chr2 9554307 - MBOAT2 chr2 8999034 - Exonic hg19 HNSC TCGA-CN-5355 8 54 Out-of-frame Intra-chr p25.1 p25.1 30659 ChimerSeq STARFusion TCGA_RNA-Seq ITGB1BP1-MBOAT2 ITGB1BP1 chr2 9558755 - MBOAT2 chr2 8999034 - Exonic hg19 HNSC TCGA-CN-5355 3 53 Out-of-frame Intra-chr p25.1 p25.1 30660 ChimerSeq STARFusion TCGA_RNA-Seq HSPB1-KRT17 HSPB1 chr7 75933512 + KRT17 chr17 39776808 - Exonic hg19 HNSC TCGA-CN-5355 3 6 Out-of-frame Inter-chr q11.23 q21.2 30661 ChimerSeq STARFusion TCGA_RNA-Seq PAN3-NTRK2 PAN3 chr13 28713224 + NTRK2 chr9 87549077 + Exonic hg19 HNSC TCGA-BB-4223 7 5 In-Frame Inter-chr q12.2 q21.33 Oncogene Seq+ 30662 ChimerSeq STARFusion TCGA_RNA-Seq FAM69A-LRRC8D FAM69A chr1 93426933 - LRRC8D chr1 90309197 + Exonic hg19 HNSC TCGA-BB-4223 4 11 CDS-5'UTR Intra-chr p22.1 p22.2 Seq+ 30663 ChimerSeq STARFusion TCGA_RNA-Seq OBSCN-CASZ1 OBSCN chr1 228412435 + CASZ1 chr1 10725628 - Exonic hg19 HNSC TCGA-BB-4223 3 15 In-Frame Intra-chr q42.13 p36.22 Transcription factor Seq+ 30664 ChimerSeq STARFusion TCGA_RNA-Seq SPG11-JMJD7 SPG11 chr15 44880765 - JMJD7 chr15 42126938 + Exonic hg19 HNSC TCGA-BB-4223 2 16 Out-of-frame Intra-chr q21.1 q15.1 Seq+ 30665 ChimerSeq STARFusion TCGA_RNA-Seq SPG11-PLA2G4B SPG11 chr15 44880765 - PLA2G4B chr15 42126938 + Exonic hg19 HNSC TCGA-BB-4223 2 16 Out-of-frame Intra-chr q21.1 q15.1 30666 ChimerSeq STARFusion TCGA_RNA-Seq PCYT1A-TFRC PCYT1A chr3 195984659 - TFRC chr3 195803993 - Exonic hg19 HNSC TCGA-BB-4223 3 11 CDS-5'UTR Intra-chr q29 q29 30667 ChimerSeq STARFusion TCGA_RNA-Seq ATP11B-NAALADL2 ATP11B chr3 182587119 + NAALADL2 chr3 175373269 + Exonic hg19 HNSC TCGA-BB-4223 3 10 Out-of-frame Intra-chr q26.33 Oncogene q26.31 Seq+ 30668 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-B4GALNT4 IGL@ chr22 23101685 + B4GALNT4 chr11 380295 + Exonic hg19 HNSC TCGA-BB-4225 8 0 Out-of-frame Inter-chr q11.22 p15.5 30669 ChimerSeq STARFusion TCGA_RNA-Seq PACS2-DIO3OS PACS2 chr14 105820070 + DIO3OS chr14 102019094 - Exonic hg19 HNSC TCGA-BB-4224 16 57 Out-of-frame Intra-chr q32.33 q32.31 Seq+ 30670 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH1-SDCCAG3 NOTCH1 chr9 139438476 - SDCCAG3 chr9 139302390 - Exonic hg19 HNSC TCGA-BB-4224 10 37 Out-of-frame Intra-chr q34.3 Oncogene Tumor suppressor gene q34.3 Seq+ 30671 ChimerSeq STARFusion TCGA_RNA-Seq ATF7-ATP5G2 ATF7 chr12 54020064 - ATP5G2 chr12 54070444 - Exonic hg19 HNSC TCGA-BB-4224 9 33 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 Seq+ 30672 ChimerSeq STARFusion TCGA_RNA-Seq PACS2-DIO3OS PACS2 chr14 105818804 + DIO3OS chr14 102019091 - Exonic hg19 HNSC TCGA-BB-4224 3 55 CDS-3'UTR Intra-chr q32.33 q32.31 Seq+ 30673 ChimerSeq STARFusion TCGA_RNA-Seq GLS-MYO1B GLS chr2 191789319 + MYO1B chr2 192141613 + Exonic hg19 HNSC TCGA-BB-4227 12 60 CDS-5'UTR Intra-chr q32.2 Tumor suppressor gene q32.3 Seq+ 30674 ChimerSeq STARFusion TCGA_RNA-Seq RAP2B-ANAPC16 RAP2B chr3 152880796 + ANAPC16 chr10 73990124 + Exonic hg19 HNSC TCGA-BB-4227 12 57 Out-of-frame Inter-chr q25.2 q22.1 Seq+ 30675 ChimerSeq STARFusion TCGA_RNA-Seq MSI2-UTP18 MSI2 chr17 55478832 + UTP18 chr17 49374326 + Exonic hg19 HNSC TCGA-BB-4227 9 42 Out-of-frame Intra-chr q22 q21.33 Seq+ 30676 ChimerSeq STARFusion TCGA_RNA-Seq RAP2B-ANAPC16 RAP2B chr3 152880846 + ANAPC16 chr10 73990124 + Exonic hg19 HNSC TCGA-BB-4227 7 39 Out-of-frame Inter-chr q25.2 q22.1 Seq+ 30677 ChimerSeq STARFusion TCGA_RNA-Seq RAP2B-ASCC1 RAP2B chr3 152881366 + ASCC1 chr10 73975830 - Exonic hg19 HNSC TCGA-BB-4227 5 17 Out-of-frame Inter-chr q25.2 q22.1 Seq+ 30678 ChimerSeq STARFusion TCGA_RNA-Seq TTLL11-NDUFA8 TTLL11 chr9 124801551 - NDUFA8 chr9 124910556 - Exonic hg19 HNSC TCGA-BB-4227 2 16 Out-of-frame Intra-chr q33.2 q33.2 Seq+ 30679 ChimerSeq STARFusion TCGA_RNA-Seq C22orf39-IGHG4 C22orf39 chr22 19344505 - IGHG4 chr14 106136183 - Exonic hg19 HNSC TCGA-CN-5358 76 1 Out-of-frame Inter-chr q11.21 30680 ChimerSeq STARFusion TCGA_RNA-Seq C22orf39-IGHG4 C22orf39 chr22 19344505 - IGHG4 chr14 106092404 - Exonic hg19 HNSC TCGA-CN-5358 63 1 Out-of-frame Inter-chr q11.21 30681 ChimerSeq STARFusion TCGA_RNA-Seq CIT-IGHG1 CIT chr12 120125268 - IGHG1 chr14 106240388 - Exonic hg19 HNSC TCGA-CN-5358 35 1 Out-of-frame Inter-chr q24.23 q32.33 30682 ChimerSeq STARFusion TCGA_RNA-Seq ARSG-IGL@ ARSG chr17 66364774 + IGL@ chr22 23235961 + Exonic hg19 HNSC TCGA-CN-5358 30 1 Out-of-frame Inter-chr q24.2 q11.22 30683 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-SOS1 IGL@ chr22 22677320 + SOS1 chr2 39210757 - Exonic hg19 HNSC TCGA-CN-5358 19 1 Out-of-frame Inter-chr q11.22 p22.1 30684 ChimerSeq STARFusion TCGA_RNA-Seq C22orf39-IGHG4 C22orf39 chr22 19344505 - IGHG4 chr14 106111128 - Exonic hg19 HNSC TCGA-CN-5358 12 1 Out-of-frame Inter-chr q11.21 30685 ChimerSeq STARFusion TCGA_RNA-Seq DSP-IGKC DSP chr6 7569562 + IGKC chr2 89161429 - Exonic hg19 HNSC TCGA-CN-5358 3 25 Out-of-frame Inter-chr p24.3 Tumor suppressor gene p11.2 30686 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-NOTCH1 IGHG1 chr14 106134590 - NOTCH1 chr9 139403428 - Exonic hg19 HNSC TCGA-CN-5358 7 1 Out-of-frame Inter-chr q32.33 q34.3 Oncogene Tumor suppressor gene 30687 ChimerSeq STARFusion TCGA_RNA-Seq PTPRS-IGH@ PTPRS chr19 5258041 - IGH@ chr14 106330057 - Exonic hg19 HNSC TCGA-UP-A6WW 19 1 Out-of-frame Inter-chr p13.3 32.33 30688 ChimerSeq STARFusion TCGA_RNA-Seq CYLD-UNGP1 CYLD chr16 50816377 + UNGP1 chr16 51312692 + Exonic hg19 HNSC TCGA-UP-A6WW 13 17 Out-of-frame Intra-chr q12.1 Oncogene Tumor suppressor gene Seq+ 30689 ChimerSeq STARFusion TCGA_RNA-Seq ATP5SL-IGKC ATP5SL chr19 41938071 - IGKC chr2 89161435 - Exonic hg19 HNSC TCGA-UP-A6WW 12 1 Out-of-frame Inter-chr q13.2 p11.2 30690 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN5-MAPK10 TSPAN5 chr4 99579297 - MAPK10 chr4 86938528 - Exonic hg19 HNSC TCGA-UP-A6WW 4 20 Out-of-frame Intra-chr q23 q21.3 Tumor suppressor gene Seq+ 30691 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN5-MAPK10 TSPAN5 chr4 99579297 - MAPK10 chr4 86938523 - Exonic hg19 HNSC TCGA-UP-A6WW 2 20 Out-of-frame Intra-chr q23 q21.3 Tumor suppressor gene Seq+ 30692 ChimerSeq STARFusion TCGA_RNA-Seq CUEDC1-C9orf3 CUEDC1 chr17 56032586 - C9orf3 chr9 97822976 + Exonic hg19 HNSC TCGA-UP-A6WW 5 4 5'UTR-CDS Inter-chr q22 q22.32 30693 ChimerSeq STARFusion TCGA_RNA-Seq SRP72-LINC00989 SRP72 chr4 57352563 + LINC00989 chr4 80413816 + Exonic hg19 HNSC TCGA-CN-A6V7 13 75 Out-of-frame Intra-chr q12 q21.21 30694 ChimerSeq STARFusion TCGA_RNA-Seq RNF126-PRSS57 RNF126 chr19 649679 - PRSS57 chr19 687188 - Exonic hg19 HNSC TCGA-CN-A6V6 65 173 In-Frame Intra-chr p13.3 p13.3 Seq+ 30695 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-MYL6 IGH@ chr14 106573240 - MYL6 chr12 56553742 + Exonic hg19 HNSC TCGA-CN-A6V6 5 1 Out-of-frame Inter-chr 32.33 q13.2 30696 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SERF2 IGH@ chr14 106452670 - SERF2 chr15 44091638 + Exonic hg19 HNSC TCGA-CN-A6V3 11 1 Out-of-frame Inter-chr 32.33 q15.3 30697 ChimerSeq STARFusion TCGA_RNA-Seq NCKAP5-LYPD1 NCKAP5 chr2 133971288 - LYPD1 chr2 133403853 - Exonic hg19 HNSC TCGA-CN-A6V3 3 10 Out-of-frame Intra-chr q21.2 q21.2 30698 ChimerSeq STARFusion TCGA_RNA-Seq CIRH1A-SNTB2 CIRH1A chr16 69187583 + SNTB2 chr16 69333493 + Exonic hg19 HNSC TCGA-CN-A6V3 2 9 In-Frame Intra-chr 30699 ChimerSeq STARFusion TCGA_RNA-Seq NIPAL3-GRHL3 NIPAL3 chr1 24779994 + GRHL3 chr1 24690675 + Exonic hg19 HNSC TCGA-HD-8314 31 64 Out-of-frame Intra-chr p36.11 p36.11 Transcription factor Seq+ 30700 ChimerSeq STARFusion TCGA_RNA-Seq ZG16B-PRH2 ZG16B chr16 2881946 + PRH2 chr12 11083485 + Exonic hg19 HNSC TCGA-CV-6933 4 159 Out-of-frame Inter-chr 30701 ChimerSeq STARFusion TCGA_RNA-Seq CST4-PRH2 CST4 chr20 23666488 - PRH2 chr12 11083444 + Exonic hg19 HNSC TCGA-CV-6933 4 154 Out-of-frame Inter-chr p11.21 30702 ChimerSeq STARFusion TCGA_RNA-Seq CST4-PRR4 CST4 chr20 23666488 - PRR4 chr12 11035051 - Exonic hg19 HNSC TCGA-CV-6933 3 146 Out-of-frame Inter-chr p11.21 30703 ChimerSeq STARFusion TCGA_RNA-Seq ZG16B-PRR4 ZG16B chr16 2881946 + PRR4 chr12 11035010 - Exonic hg19 HNSC TCGA-CV-6933 4 142 Out-of-frame Inter-chr 30704 ChimerSeq STARFusion TCGA_RNA-Seq ZG16B-PRH2 ZG16B chr16 2881946 + PRH2 chr12 11083536 + Exonic hg19 HNSC TCGA-CV-6933 3 113 Out-of-frame Inter-chr 30705 ChimerSeq STARFusion TCGA_RNA-Seq ZG16B-PRH2 ZG16B chr16 2881946 + PRH2 chr12 11083629 + Exonic hg19 HNSC TCGA-CV-6933 3 113 Out-of-frame Inter-chr 30706 ChimerSeq STARFusion TCGA_RNA-Seq ZG16B-PRH2 ZG16B chr16 2881954 + PRH2 chr12 11083493 + Exonic hg19 HNSC TCGA-CV-6933 3 113 Out-of-frame Inter-chr 30707 ChimerSeq STARFusion TCGA_RNA-Seq BPIFA2-PRH1 BPIFA2 chr20 31769118 + PRH1 chr12 11035004 - Exonic hg19 HNSC TCGA-CV-6933 4 84 Out-of-frame Inter-chr q11.21 30708 ChimerSeq STARFusion TCGA_RNA-Seq MUC7-PRH1 MUC7 chr4 71347192 + PRH1 chr12 11035153 - Exonic hg19 HNSC TCGA-CV-6933 5 74 Out-of-frame Inter-chr q13.3 30709 ChimerSeq STARFusion TCGA_RNA-Seq SLC52A1-PRH1 SLC52A1 chr17 4936556 - PRH1 chr12 11034988 - Exonic hg19 HNSC TCGA-CV-6933 13 0 Out-of-frame Inter-chr p13.2 30710 ChimerSeq STARFusion TCGA_RNA-Seq CST5-PRH1 CST5 chr20 23856794 - PRH1 chr12 11035078 - Exonic hg19 HNSC TCGA-CV-6933 5 21 Out-of-frame Inter-chr p11.21 Tumor suppressor gene 30711 ChimerSeq STARFusion TCGA_RNA-Seq CST5-PRH1 CST5 chr20 23856794 - PRH1 chr12 11035141 - Exonic hg19 HNSC TCGA-CV-6933 4 21 Out-of-frame Inter-chr p11.21 Tumor suppressor gene 30712 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D9B-IGH@ TBC1D9B chr5 179302020 - IGH@ chr14 106175004 - Exonic hg19 HNSC TCGA-CV-6936 16 1 Out-of-frame Inter-chr 32.33 30713 ChimerSeq STARFusion TCGA_RNA-Seq LMAN2L-FAM178B LMAN2L chr2 97400146 - FAM178B chr2 97595057 - Exonic hg19 HNSC TCGA-CV-6936 2 29 In-Frame Intra-chr q11.2 q11.2 Seq+ 30714 ChimerSeq STARFusion TCGA_RNA-Seq FKBP1A-CDS2 FKBP1A chr20 1373478 - CDS2 chr20 5169713 + Exonic hg19 HNSC TCGA-CV-6937 17 66 Out-of-frame Intra-chr p13 p12.3 Seq+ 30715 ChimerSeq STARFusion TCGA_RNA-Seq ATP11B-TFRC ATP11B chr3 182587119 + TFRC chr3 195785503 - Exonic hg19 HNSC TCGA-CV-6937 4 30 In-Frame Intra-chr q26.33 Oncogene q29 Seq+ 30716 ChimerSeq STARFusion TCGA_RNA-Seq SMPD4P1-KLHL22 SMPD4P1 chr22 20967950 - KLHL22 chr22 20825802 - Exonic hg19 HNSC TCGA-CV-6937 6 10 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 30717 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1549L-WARS2 KIAA1549L chr11 33596419 + WARS2 chr1 119619230 - Exonic hg19 HNSC TCGA-CV-6937 4 10 Out-of-frame Inter-chr p13 p12 Seq+ 30718 ChimerSeq STARFusion TCGA_RNA-Seq BPIFB1-PRR4 BPIFB1 chr20 31879770 + PRR4 chr12 10999818 - Exonic hg19 HNSC TCGA-CV-6934 7 137 Out-of-frame Inter-chr q11.21 30719 ChimerSeq STARFusion TCGA_RNA-Seq MRPL21-IGHMBP2 MRPL21 chr11 68671191 - IGHMBP2 chr11 68682291 + Exonic hg19 HNSC TCGA-UF-A71E 3 32 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 30720 ChimerSeq STARFusion TCGA_RNA-Seq EPC1-QPCT EPC1 chr10 32594700 - QPCT chr2 37586723 + Exonic hg19 HNSC TCGA-UF-A71E 8 10 Out-of-frame Inter-chr p11.22 p22.2 Seq+ 30721 ChimerSeq STARFusion TCGA_RNA-Seq RABEP1-RNF167 RABEP1 chr17 5235447 + RNF167 chr17 4843782 + Exonic hg19 HNSC TCGA-UF-A71A 11 35 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 30722 ChimerSeq STARFusion TCGA_RNA-Seq TTK-BCKDHB TTK chr6 80724303 + BCKDHB chr6 80910651 + Exonic hg19 HNSC TCGA-UF-A71A 5 10 In-Frame Intra-chr q14.1 Other:TTK q14.1 Seq+ 30723 ChimerSeq STARFusion TCGA_RNA-Seq MYL12A-MYOM1 MYL12A chr18 3247907 + MYOM1 chr18 3219876 - Exonic hg19 HNSC TCGA-UF-A71A 3 12 5'UTR-5'UTR Intra-chr p11.31 p11.31 Seq+ 30724 ChimerSeq STARFusion TCGA_RNA-Seq PPAT-NMU PPAT chr4 57301516 - NMU chr4 56496627 - Exonic hg19 HNSC TCGA-UF-A71A 4 6 Out-of-frame Intra-chr q12 q12 30725 ChimerSeq STARFusion TCGA_RNA-Seq LENG1-NIT2 LENG1 chr19 54662020 - NIT2 chr3 100059917 + Exonic hg19 HNSC TCGA-QK-A652 10 25 Out-of-frame Inter-chr q12.2 Tumor suppressor gene Seq+ 30726 ChimerSeq STARFusion TCGA_RNA-Seq MLX-PTP4A2P1 MLX chr17 40721624 + PTP4A2P1 chr17 40685528 + Exonic hg19 HNSC TCGA-UF-A71B 3 6 Out-of-frame Intra-chr q21.2 Transcription factor 30727 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-P2RY8 ASMTL chrY 1503915 - P2RY8 chrY 1535475 - Exonic hg19 KICH TCGA-KL-8344-01A 3 4 CDS-5'UTR Intra-chr p22.33 p22.33 Seq+ 30728 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 KICH TCGA-KN-8418-01A 3 2 CDS-5'UTR Intra-chr q23 Seq+ 30729 ChimerSeq STARFusion TCGA_RNA-Seq CPQ-SDC2 CPQ chr8 97657630 + SDC2 chr8 97605708 + Exonic hg19 KICH TCGA-KN-8418-01A 2 2 5'UTR-CDS Intra-chr q22.1 q22.1 30730 ChimerSeq STARFusion TCGA_RNA-Seq HSD17B12-WT1 HSD17B12 chr11 43702537 + WT1 chr11 32450165 - Exonic hg19 KICH TCGA-KL-8335-01A 6 5 In-Frame Intra-chr p11.2 p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 30731 ChimerSeq STARFusion TCGA_RNA-Seq RANGAP1-RPL3 RANGAP1 chr22 41660668 - RPL3 chr22 39714597 - Exonic hg19 KICH TCGA-KL-8335-01A 2 10 In-Frame Intra-chr q13.2 q13.1 30732 ChimerSeq STARFusion TCGA_RNA-Seq GALK2-FGF7 GALK2 chr15 49612002 + FGF7 chr15 49775348 + Exonic hg19 KICH TCGA-KL-8336-01A 2 11 Out-of-frame Intra-chr q21.1 q21.2 30733 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 KICH TCGA-KL-8336-01A 2 2 CDS-5'UTR Intra-chr q23 Seq+ 30734 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 KICH TCGA-KL-8336-01A 2 0 CDS-5'UTR Intra-chr p12 p12 Transcription factor 30735 ChimerSeq STARFusion TCGA_RNA-Seq LAMA2-C6orf58 LAMA2 chr6 129204502 + C6orf58 chr6 127899831 + Exonic hg19 KICH TCGA-KN-8428-01A 7 56 In-Frame Intra-chr q22.33 q22.33 Seq+ 30736 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 KICH TCGA-KM-8440-01A 2 2 CDS-5'UTR Intra-chr p12 p12 Transcription factor 30737 ChimerSeq STARFusion TCGA_RNA-Seq FXYD2-ST3GAL3 FXYD2 chr11 117693395 - ST3GAL3 chr1 44386565 + Exonic hg19 KICH TCGA-KO-8417-01A 3 1 Out-of-frame Inter-chr q23.3 p34.1 30738 ChimerSeq STARFusion TCGA_RNA-Seq APOE-KLK1 APOE chr19 45411209 + KLK1 chr19 51323699 - Exonic hg19 KICH TCGA-KM-8639-01A 2 8 In-Frame Intra-chr q13.32 q13.33 30739 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-GPR56 IGH@ chr14 106829600 - GPR56 chr16 57673405 + Exonic hg19 KICH TCGA-KL-8333 109 3 Out-of-frame Inter-chr 32.33 q21 30740 ChimerSeq STARFusion TCGA_RNA-Seq C1QC-IGH@ C1QC chr1 22970524 + IGH@ chr14 106331651 - Exonic hg19 KICH TCGA-KL-8333 8 1 Out-of-frame Inter-chr p36.12 32.33 30741 ChimerSeq STARFusion TCGA_RNA-Seq SOX6-BTBD10 SOX6 chr11 16339992 - BTBD10 chr11 13427403 - Exonic hg19 KICH TCGA-KL-8339-01A 7 48 In-Frame Intra-chr p15.2 Transcription factor p15.3 Seq+ 30742 ChimerSeq STARFusion TCGA_RNA-Seq SOX6-BTBD10 SOX6 chr11 16339992 - BTBD10 chr11 13410688 - Exonic hg19 KICH TCGA-KL-8339-01A 5 48 In-Frame Intra-chr p15.2 Transcription factor p15.3 Seq+ 30743 ChimerSeq STARFusion TCGA_RNA-Seq MMP14-RBM23 MMP14 chr14 23306134 + RBM23 chr14 23371591 - Exonic hg19 KICH TCGA-KL-8339-01A 7 27 In-Frame Intra-chr q11.2 q11.2 Seq+ 30744 ChimerSeq STARFusion TCGA_RNA-Seq HECTD1-DHRS4L2 HECTD1 chr14 31614013 - DHRS4L2 chr14 24459391 + Exonic hg19 KICH TCGA-KL-8339-01A 5 16 Out-of-frame Intra-chr q12 q11.2 Seq+ 30745 ChimerSeq STARFusion TCGA_RNA-Seq STARD10-ZC3H12C STARD10 chr11 72492020 - ZC3H12C chr11 110007388 + Exonic hg19 KICH TCGA-KL-8339-01A 6 5 In-Frame Intra-chr q13.4 q22.3 Seq+ 30746 ChimerSeq STARFusion TCGA_RNA-Seq CTDSPL-ITGA9 CTDSPL chr3 37903769 + ITGA9 chr3 37774203 + Exonic hg19 KICH TCGA-KL-8339-01A 2 8 Out-of-frame Intra-chr p22.2 Tumor suppressor gene p22.2 Oncogene Seq+ 30747 ChimerSeq STARFusion TCGA_RNA-Seq MAGT1-ATRX MAGT1 chrX 77096743 - ATRX chrX 76876000 - Exonic hg19 KICH TCGA-KO-8408-01A 5 6 In-Frame Intra-chr q21.1 q21.1 Oncogene 30748 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-NOC4L GAS6 chr13 114566548 - NOC4L chr12 132635526 + Exonic hg19 KICH TCGA-KO-8415-01A 2 2 Out-of-frame Inter-chr q34 Oncogene q24.33 30749 ChimerSeq STARFusion TCGA_RNA-Seq BAALC-EIF3E BAALC chr8 104153285 + EIF3E chr8 109215732 - Exonic hg19 KICH TCGA-KL-8341-01A 34 43 Out-of-frame Intra-chr q22.3 q23.1 Seq+ 30750 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1G1-AP4E1 CSNK1G1 chr15 64648187 - AP4E1 chr15 51260460 + Exonic hg19 KICH TCGA-KL-8341-01A 5 20 5'UTR-CDS Intra-chr q22.31 q21.2 30751 ChimerSeq STARFusion TCGA_RNA-Seq CMC1-WDR72 CMC1 chr3 28304871 + WDR72 chr15 53815519 - Exonic hg19 KICH TCGA-KL-8341-01A 5 13 In-Frame Inter-chr p24.1 q21.3 Seq+ 30752 ChimerSeq STARFusion TCGA_RNA-Seq LRP12-CCL28 LRP12 chr8 105544135 - CCL28 chr5 43388578 - Exonic hg19 KICH TCGA-KL-8341-01A 4 12 In-Frame Inter-chr q22.3 p12 Seq+ 30753 ChimerSeq STARFusion TCGA_RNA-Seq COPS7A-ZDHHC11 COPS7A chr12 6838615 + ZDHHC11 chr5 801279 - Exonic hg19 KICH TCGA-KL-8341-01A 2 7 In-Frame Inter-chr p13.31 p15.33 30754 ChimerSeq STARFusion TCGA_RNA-Seq HERC1-MYO5A HERC1 chr15 63904450 - MYO5A chr15 52622696 - Exonic hg19 KICH TCGA-KL-8341-01A 2 7 Out-of-frame Intra-chr q22.31 q21.2 Seq+ 30755 ChimerSeq STARFusion TCGA_RNA-Seq RORA-MEGF11 RORA chr15 60970856 - MEGF11 chr15 66420749 - Exonic hg19 KICH TCGA-KL-8341-01A 2 1 CDS-5'UTR Intra-chr q22.2 Transcription factor q22.31 30756 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 KICH TCGA-KL-8330-01A 2 2 CDS-5'UTR Intra-chr q23 Seq+ 30757 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 KICH TCGA-KN-8419-01A 3 10 3'UTR-5'UTR Intra-chr q34 30758 ChimerSeq STARFusion TCGA_RNA-Seq ITPRIPL2-RN7SL2 ITPRIPL2 chr16 19131485 + RN7SL2 chr14 50329505 - Exonic hg19 KICH TCGA-KN-8435-01A 4 12 Out-of-frame Inter-chr p12.3 q21.3 30759 ChimerSeq STARFusion TCGA_RNA-Seq AP3D1-SLC6A8 AP3D1 chr19 2101455 - SLC6A8 chrX 152961595 + Exonic hg19 KICH TCGA-KN-8433-01A 4 1 Out-of-frame Inter-chr p13.3 q28 30760 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-TRAPPC9 PTK2 chr8 141813642 - TRAPPC9 chr8 141034176 - Exonic hg19 KICH TCGA-KN-8426-01A 2 19 In-Frame Intra-chr q24.3 q24.3 Seq+ 30761 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 KICH TCGA-KN-8426-01A 2 4 3'UTR-5'UTR Intra-chr q34 30762 ChimerSeq STARFusion TCGA_RNA-Seq VIM-DES VIM chr10 17271757 + DES chr2 220283497 + Exonic hg19 KICH TCGA-KN-8427-01A 4 3 Out-of-frame Inter-chr p13 Tumor suppressor gene q35 30763 ChimerSeq STARFusion TCGA_RNA-Seq AHNAK-VIM AHNAK chr11 62302488 - VIM chr10 17271637 + Exonic hg19 KICH TCGA-KN-8427-01A 3 3 Out-of-frame Inter-chr q12.3 Tumor suppressor gene p13 Tumor suppressor gene 30764 ChimerSeq STARFusion TCGA_RNA-Seq SUGT1-NOL6 SUGT1 chr13 53237247 + NOL6 chr9 33472410 - Exonic hg19 KICH TCGA-KM-8442-01A 3 2 In-Frame Inter-chr q14.3 p13.3 30765 ChimerSeq STARFusion TCGA_RNA-Seq SERHL2-RRP7A SERHL2 chr22 42970087 + RRP7A chr22 42908182 - Exonic hg19 KICH TCGA-KL-8324-01A 3 1 Out-of-frame Intra-chr q13.2 q13.2 30766 ChimerSeq STARFusion TCGA_RNA-Seq XPO6-GSG1L XPO6 chr16 28112779 - GSG1L chr16 27974524 - Exonic hg19 KICH TCGA-KL-8324-01A 2 1 Out-of-frame Intra-chr p12.1 p12.1 30767 ChimerSeq STARFusion TCGA_RNA-Seq C20orf194-ADRA1D C20orf194 chr20 3388122 - ADRA1D chr20 4202777 - Exonic hg19 KICH TCGA-KL-8328-01A 2 8 Out-of-frame Intra-chr p13 p13 Seq+ 30768 ChimerSeq STARFusion TCGA_RNA-Seq APOE-KLK1 APOE chr19 45411209 + KLK1 chr19 51323699 - Exonic hg19 KICH TCGA-KM-8639 2 8 In-Frame Intra-chr q13.32 q13.33 30769 ChimerSeq STARFusion TCGA_RNA-Seq PARK2-PACRG PARK2 chr6 163148694 - PACRG chr6 163235179 + Exonic hg19 KICH TCGA-KN-8425-01A 2 0 Out-of-frame Intra-chr Tumor suppressor gene q26 Tumor suppressor gene 30770 ChimerSeq STARFusion TCGA_RNA-Seq LNPEP-GPBP1 LNPEP chr5 96271878 + GPBP1 chr5 56545281 + Exonic hg19 KICH TCGA-KM-8443-01A 19 44 Out-of-frame Intra-chr q15 q11.2 Transcription factor Seq+ 30771 ChimerSeq STARFusion TCGA_RNA-Seq LNPEP-GPBP1 LNPEP chr5 96271878 + GPBP1 chr5 56557007 + Exonic hg19 KICH TCGA-KM-8443-01A 10 44 Out-of-frame Intra-chr q15 q11.2 Transcription factor Seq+ 30772 ChimerSeq STARFusion TCGA_RNA-Seq LNPEP-GPBP1 LNPEP chr5 96271878 + GPBP1 chr5 56545284 + Exonic hg19 KICH TCGA-KM-8443-01A 6 44 Out-of-frame Intra-chr q15 q11.2 Transcription factor Seq+ 30773 ChimerSeq STARFusion TCGA_RNA-Seq LNPEP-GPBP1 LNPEP chr5 96271878 + GPBP1 chr5 56545236 + Exonic hg19 KICH TCGA-KM-8443-01A 4 44 Out-of-frame Intra-chr q15 q11.2 Transcription factor Seq+ 30774 ChimerSeq STARFusion TCGA_RNA-Seq ZMYM2-ATXN8OS ZMYM2 chr13 20625738 + ATXN8OS chr13 70689273 + Exonic hg19 KICH TCGA-KM-8443-01A 3 2 CDS-5'UTR Intra-chr q12.11 q21.33 30775 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 KICH TCGA-KM-8443-01A 2 5 CDS-5'UTR Intra-chr q23 Seq+ 30776 ChimerSeq STARFusion TCGA_RNA-Seq FOXO1-PDGFRB FOXO1 chr13 41239720 - PDGFRB chr5 149499686 - Exonic hg19 KICH TCGA-KM-8443-01A 2 4 In-Frame Inter-chr q14.11 Oncogene Tumor suppressor gene Transcription factor q32 Oncogene Seq+ 30777 ChimerSeq STARFusion TCGA_RNA-Seq VPS36-ACSL6 VPS36 chr13 53013233 - ACSL6 chr5 131329944 - Exonic hg19 KICH TCGA-KM-8443-01A 2 1 Out-of-frame Inter-chr q14.3 q31.1 30778 ChimerSeq STARFusion TCGA_RNA-Seq ARNT-MRPL52 ARNT chr1 150818739 - MRPL52 chr14 23303381 + Exonic hg19 KICH TCGA-KO-8404-01A 2 1 Out-of-frame Inter-chr q21.3 Oncogene Transcription factor q11.2 Seq+ 30779 ChimerSeq STARFusion TCGA_RNA-Seq PARK2-PACRG PARK2 chr6 163148694 - PACRG chr6 163235179 + Exonic hg19 KICH TCGA-KL-8329-01A 3 4 Out-of-frame Intra-chr Tumor suppressor gene q26 Tumor suppressor gene 30780 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 KICH TCGA-KL-8329-01A 2 3 CDS-5'UTR Intra-chr p12 p12 Transcription factor 30781 ChimerSeq STARFusion TCGA_RNA-Seq AP3D1-SLC6A8 AP3D1 chr19 2101455 - SLC6A8 chrX 152961595 + Exonic hg19 KICH TCGA-KL-8328 10 1 Out-of-frame Inter-chr p13.3 q28 30782 ChimerSeq STARFusion TCGA_RNA-Seq C20orf194-ADRA1D C20orf194 chr20 3388122 - ADRA1D chr20 4202777 - Exonic hg19 KICH TCGA-KL-8328 2 8 Out-of-frame Intra-chr p13 p13 Seq+ 30783 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 KICH TCGA-KL-8334-01A 3 6 CDS-5'UTR Intra-chr p12 p12 Transcription factor 30784 ChimerSeq STARFusion TCGA_RNA-Seq GLTSCR2-DHX34 GLTSCR2 chr19 48249040 + DHX34 chr19 47885237 + Exonic hg19 KIRC TCGA-CJ-4639-01A 2 1 Out-of-frame Intra-chr Tumor suppressor gene q13.32 30785 ChimerSeq STARFusion TCGA_RNA-Seq AGTPBP1-EIF4EBP3 AGTPBP1 chr9 88257742 - EIF4EBP3 chr5 139928491 + Exonic hg19 KIRC TCGA-AK-3426-01A 2 0 Out-of-frame Inter-chr q21.33 q31.3 30786 ChimerSeq STARFusion TCGA_RNA-Seq NREP-COMMD10 NREP chr5 111091467 - COMMD10 chr5 115469765 + Exonic hg19 KIRC TCGA-A3-3376-01A 32 58 In-Frame Intra-chr q22.1 q23.1 30787 ChimerSeq STARFusion TCGA_RNA-Seq AP3S1-MITF AP3S1 chr5 115205825 + MITF chr3 69986973 + Exonic hg19 KIRC TCGA-A3-3376-01A 10 10 In-Frame Inter-chr q22.3 p13 Oncogene Transcription factor 30788 ChimerSeq STARFusion TCGA_RNA-Seq POLR2K-NTM POLR2K chr8 101164115 + NTM chr11 132206559 + Exonic hg19 KIRC TCGA-AK-3431-01A 3 1 Out-of-frame Inter-chr q22.2 q25 30789 ChimerSeq STARFusion TCGA_RNA-Seq ITGAL-MCAM ITGAL chr16 30534272 + MCAM chr11 119179695 - Exonic hg19 KIRC TCGA-BP-4355-01A 3 18 Out-of-frame Inter-chr p11.2 q23.3 30790 ChimerSeq STARFusion TCGA_RNA-Seq PCM1-NRG1 PCM1 chr8 17782289 + NRG1 chr8 32611890 + Exonic hg19 KIRC TCGA-B8-5553-01A 4 15 5'UTR-CDS Intra-chr p22 p12 Seq+ 30791 ChimerSeq STARFusion TCGA_RNA-Seq PVRL2-GAMT PVRL2 chr19 45377735 + GAMT chr19 1397498 - Exonic hg19 KIRC TCGA-B0-5100-01A 2 1 Out-of-frame Intra-chr p13.3 30792 ChimerSeq STARFusion TCGA_RNA-Seq MYH11-APOBEC3G MYH11 chr16 15931765 - APOBEC3G chr22 39482284 + Exonic hg19 KIRC TCGA-B0-5100-01A 2 0 In-Frame Inter-chr Oncogene q13.1 30793 ChimerSeq STARFusion TCGA_RNA-Seq VPS13A-DHX29 VPS13A chr9 79875140 + DHX29 chr5 54573110 - Exonic hg19 KIRC TCGA-B0-4819-01A 2 1 In-Frame Inter-chr q21.2 q11.2 30794 ChimerSeq STARFusion TCGA_RNA-Seq MAGED2-TRO MAGED2 chrX 54839457 + TRO chrX 54953016 + Exonic hg19 KIRC TCGA-B0-5710-01A 3 1 In-Frame Intra-chr p11.21 p11.21 30795 ChimerSeq STARFusion TCGA_RNA-Seq SUGT1-NOL6 SUGT1 chr13 53237247 + NOL6 chr9 33472410 - Exonic hg19 KIRC TCGA-BP-4970-01A 3 1 In-Frame Inter-chr q14.3 p13.3 30796 ChimerSeq STARFusion TCGA_RNA-Seq TMED3-KIAA1024 TMED3 chr15 79606347 + KIAA1024 chr15 79748440 + Exonic hg19 KIRC TCGA-BP-4970-01A 2 2 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 30797 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD19P-EEF1D ANKRD19P chr9 95599826 + EEF1D chr8 144669022 - Exonic hg19 KIRC TCGA-AK-3436-01A 3 12 5'UTR-5'UTR Inter-chr q22.31 30798 ChimerSeq STARFusion TCGA_RNA-Seq APEX2-SRSF5 APEX2 chrX 55030301 + SRSF5 chr14 70237184 + Exonic hg19 KIRC TCGA-AK-3436-01A 2 1 In-Frame Inter-chr p11.21 q24.1 30799 ChimerSeq STARFusion TCGA_RNA-Seq FAM172A-FHIT FAM172A chr5 93294482 - FHIT chr3 59738047 - Exonic hg19 KIRC TCGA-B2-4101-01A 21 45 In-Frame Inter-chr q15 Tumor suppressor gene p14.2 Tumor suppressor gene Seq+ 30800 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-TNPO2 RNA45S5 chrUn_gl000220 114138 + TNPO2 chr19 12811938 - Exonic hg19 KIRC TCGA-B2-5633-01B 16 0 Out-of-frame Inter-chr p13.13 30801 ChimerSeq STARFusion TCGA_RNA-Seq CTSL1-GNB2L1 CTSL1 chr9 90343724 + GNB2L1 chr5 180666582 - Exonic hg19 KIRC TCGA-B2-4099-01A 2 1 In-Frame Inter-chr Tumor suppressor gene 30802 ChimerSeq STARFusion TCGA_RNA-Seq PRDM10-FAM156A PRDM10 chr11 129872617 - FAM156A chrX 52985544 - Exonic hg19 KIRC TCGA-B2-4099-01A 2 0 5'UTR-5'UTR Inter-chr q24.3 Transcription factor p11.22 30803 ChimerSeq STARFusion TCGA_RNA-Seq VAMP7-HRASLS5 VAMP7 chrX 155149544 + HRASLS5 chr11 63235937 - Exonic hg19 KIRC TCGA-B8-4619-01A 2 0 5'UTR-CDS Inter-chr q28 q12.3 30804 ChimerSeq STARFusion TCGA_RNA-Seq EEF2K-N4BP2L2 EEF2K chr16 22237296 + N4BP2L2 chr13 33095586 - Exonic hg19 KIRC TCGA-CJ-4888-01A 2 0 In-Frame Inter-chr p12.2 q13.1 30805 ChimerSeq STARFusion TCGA_RNA-Seq DMGDH-NMNAT2 DMGDH chr5 78301096 - NMNAT2 chr1 183230438 - Exonic hg19 KIRC TCGA-CW-5589-01A 16 45 In-Frame Inter-chr q14.1 q25.3 Seq+ 30806 ChimerSeq STARFusion TCGA_RNA-Seq SLC28A1-UBE2D2 SLC28A1 chr15 85427982 + UBE2D2 chr5 138979957 + Exonic hg19 KIRC TCGA-CW-5589-01A 2 2 5'UTR-5'UTR Inter-chr q25.3 q31.2 Seq+ 30807 ChimerSeq STARFusion TCGA_RNA-Seq POLR1A-REEP1 POLR1A chr2 86292397 - REEP1 chr2 86509365 - Exonic hg19 KIRC TCGA-B0-4822-01A 5 8 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 30808 ChimerSeq STARFusion TCGA_RNA-Seq TRIT1-MFSD2A TRIT1 chr1 40348990 - MFSD2A chr1 40422759 + Exonic hg19 KIRC TCGA-EU-5906-01A 13 37 In-Frame Intra-chr p34.2 Tumor suppressor gene p34.2 Tumor suppressor gene Seq+ 30809 ChimerSeq STARFusion TCGA_RNA-Seq XPO5-MRPS10 XPO5 chr6 43515345 - MRPS10 chr6 42179655 - Exonic hg19 KIRC TCGA-A3-3313-01A 180 486 In-Frame Intra-chr p21.1 Tumor suppressor gene p21.1 Seq+ 30810 ChimerSeq STARFusion TCGA_RNA-Seq CD2AP-USP49 CD2AP chr6 47471176 + USP49 chr6 41774749 - Exonic hg19 KIRC TCGA-A3-3313-01A 31 94 CDS-5'UTR Intra-chr p12.3 p21.1 Seq+ 30811 ChimerSeq STARFusion TCGA_RNA-Seq C6orf106-LRRC1 C6orf106 chr6 34614378 - LRRC1 chr6 53785423 + Exonic hg19 KIRC TCGA-A3-3313-01A 18 113 In-Frame Intra-chr p21.31 p12.1 Seq+ 30812 ChimerSeq STARFusion TCGA_RNA-Seq C6orf106-LRRC1 C6orf106 chr6 34614378 - LRRC1 chr6 53784296 + Exonic hg19 KIRC TCGA-A3-3313-01A 12 113 Out-of-frame Intra-chr p21.31 p12.1 Seq+ 30813 ChimerSeq STARFusion TCGA_RNA-Seq PTCHD4-CD2AP PTCHD4 chr6 47976370 - CD2AP chr6 47471016 + Exonic hg19 KIRC TCGA-A3-3313-01A 19 64 In-Frame Intra-chr p12.3 p12.3 Seq+ 30814 ChimerSeq STARFusion TCGA_RNA-Seq PKHD1-RCAN2 PKHD1 chr6 51695659 - RCAN2 chr6 46216633 - Exonic hg19 KIRC TCGA-A3-3313-01A 11 90 Out-of-frame Intra-chr p12.2 Oncogene p12.3 Seq+ 30815 ChimerSeq STARFusion TCGA_RNA-Seq CYP39A1-LEMD2 CYP39A1 chr6 46620143 - LEMD2 chr6 33748930 - Exonic hg19 KIRC TCGA-A3-3313-01A 14 47 Out-of-frame Intra-chr p12.3 p21.31 Seq+ 30816 ChimerSeq STARFusion TCGA_RNA-Seq HIST1H2AK-SCGN HIST1H2AK chr6 27805732 - SCGN chr6 25689401 + Exonic hg19 KIRC TCGA-A3-3313-01A 3 50 Out-of-frame Intra-chr p22.1 p22.2 Seq+ 30817 ChimerSeq STARFusion TCGA_RNA-Seq MRPS18A-KIF6 MRPS18A chr6 43648826 - KIF6 chr6 39353448 - Exonic hg19 KIRC TCGA-A3-3313-01A 2 10 Out-of-frame Intra-chr p21.1 p21.2 Seq+ 30818 ChimerSeq STARFusion TCGA_RNA-Seq KIF6-BTBD9 KIF6 chr6 39353398 - BTBD9 chr6 38565897 - Exonic hg19 KIRC TCGA-A3-3313-01A 3 2 CDS-5'UTR Intra-chr p21.2 p21.2 30819 ChimerSeq STARFusion TCGA_RNA-Seq FTSJD2-GPX6 FTSJD2 chr6 37403538 + GPX6 chr6 28478681 - Exonic hg19 KIRC TCGA-A3-3313-01A 3 1 Out-of-frame Intra-chr Seq+ 30820 ChimerSeq STARFusion TCGA_RNA-Seq USP49-TAF8 USP49 chr6 41839302 - TAF8 chr6 42044838 + Exonic hg19 KIRC TCGA-A3-3313-01A 2 4 5'UTR-CDS Intra-chr p21.1 p21.1 Seq+ 30821 ChimerSeq STARFusion TCGA_RNA-Seq SNHG8-FAM117B SNHG8 chr4 119200292 + FAM117B chr2 203560604 + Exonic hg19 KIRC TCGA-DV-5575-01A 2 0 5'UTR-CDS Inter-chr q26 q33.2 30822 ChimerSeq STARFusion TCGA_RNA-Seq DOCK4-IMMP2L DOCK4 chr7 111448877 - IMMP2L chr7 111161505 - Exonic hg19 KIRC TCGA-BP-5170-01A 4 21 CDS-5'UTR Intra-chr q31.1 q31.1 KB Pub Seq+ 30823 ChimerSeq STARFusion TCGA_RNA-Seq PDCD6-TERT PDCD6 chr5 272887 + TERT chr5 1282739 - Exonic hg19 KIRC TCGA-BP-4991-01A 4 29 In-Frame Intra-chr p15.33 p15.33 Oncogene Seq+ 30824 ChimerSeq STARFusion TCGA_RNA-Seq C8orf87-TRIQK C8orf87 chr8 94146973 - TRIQK chr8 93966792 - Exonic hg19 KIRC TCGA-BP-4991-01A 2 21 CDS-5'UTR Intra-chr q22.1 q22.1 30825 ChimerSeq STARFusion TCGA_RNA-Seq MPHOSPH8-SUGT1P3 MPHOSPH8 chr13 20233429 + SUGT1P3 chr13 41486859 - Exonic hg19 KIRC TCGA-BP-4991-01A 3 0 CDS-3'UTR Intra-chr q12.11 q14.11 30826 ChimerSeq STARFusion TCGA_RNA-Seq RQCD1-CYP27A1 RQCD1 chr2 219433701 + CYP27A1 chr2 219674300 + Exonic hg19 KIRC TCGA-BP-4354-01A 17 63 In-Frame Intra-chr q35 30827 ChimerSeq STARFusion TCGA_RNA-Seq RQCD1-CYP27A1 RQCD1 chr2 219433701 + CYP27A1 chr2 219676945 + Exonic hg19 KIRC TCGA-BP-4354-01A 4 63 Out-of-frame Intra-chr q35 30828 ChimerSeq STARFusion TCGA_RNA-Seq CCNT2-MAP3K19 CCNT2 chr2 135705469 + MAP3K19 chr2 135722486 - Exonic hg19 KIRC TCGA-B0-4815-01A 2 5 Out-of-frame Intra-chr q21.3 q21.3 30829 ChimerSeq STARFusion TCGA_RNA-Seq GAS7-MYH1 GAS7 chr17 10101525 - MYH1 chr17 10415863 - Exonic hg19 KIRC TCGA-BP-4342-01A 2 6 In-Frame Intra-chr p13.1 p13.1 Seq+ 30830 ChimerSeq STARFusion TCGA_RNA-Seq MYLK-NXPH1 MYLK chr3 123367818 - NXPH1 chr7 8790638 + Exonic hg19 KIRC TCGA-BP-4781-01A 4 10 Out-of-frame Inter-chr q21.1 p21.3 Seq+ 30831 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0226-OMA1 KIAA0226 chr3 197420586 - OMA1 chr1 58946846 - Exonic hg19 KIRC TCGA-A3-3351-01A 2 0 Out-of-frame Inter-chr p32.1 30832 ChimerSeq STARFusion TCGA_RNA-Seq DOT1L-ONECUT3 DOT1L chr19 2207679 + ONECUT3 chr19 1775152 + Exonic hg19 KIRC TCGA-A3-3325-01A 3 7 Out-of-frame Intra-chr p13.3 Oncogene Transcription factor p13.3 Transcription factor Seq+ 30833 ChimerSeq STARFusion TCGA_RNA-Seq BNC2-C9orf92 BNC2 chr9 16435553 - C9orf92 chr9 16215897 - Exonic hg19 KIRC TCGA-CZ-5460-01A 2 2 Out-of-frame Intra-chr p22.2 Transcription factor p22.3 30834 ChimerSeq STARFusion TCGA_RNA-Seq WSCD1-NLRP1 WSCD1 chr17 5998543 + NLRP1 chr17 5405192 - Exonic hg19 KIRC TCGA-CW-5590-01A 65 284 Out-of-frame Intra-chr p13.2 p13.2 Oncogene Seq+ 30835 ChimerSeq STARFusion TCGA_RNA-Seq LOC652276-MMP25 LOC652276 chr16 2653728 + MMP25 chr16 3107034 + Exonic hg19 KIRC TCGA-CW-5590-01A 9 20 5'UTR-CDS Intra-chr p13.3 30836 ChimerSeq STARFusion TCGA_RNA-Seq WSCD1-LOC728392 WSCD1 chr17 5998543 + LOC728392 chr17 5403270 - Exonic hg19 KIRC TCGA-CW-5590-01A 3 20 CDS-3'UTR Intra-chr p13.2 30837 ChimerSeq STARFusion TCGA_RNA-Seq FBXO18-ITGA8 FBXO18 chr10 5960441 + ITGA8 chr10 15648421 - Exonic hg19 KIRC TCGA-B0-4688-01A 51 134 In-Frame Intra-chr p15.1 p13 Seq+ 30838 ChimerSeq STARFusion TCGA_RNA-Seq CCNY-PTPRD CCNY chr10 35819171 + PTPRD chr9 10033790 - Exonic hg19 KIRC TCGA-B0-4688-01A 3 41 CDS-5'UTR Inter-chr p11.21 Oncogene Tumor suppressor gene Seq+ 30839 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1551-SOX5 KIAA1551 chr12 32123290 + SOX5 chr12 23908658 - Exonic hg19 KIRC TCGA-B0-4688-01A 4 5 Out-of-frame Intra-chr p11.21 p12.1 Transcription factor Seq+ 30840 ChimerSeq STARFusion TCGA_RNA-Seq STK32C-GPR123 STK32C chr10 134022538 - GPR123 chr10 134940737 + Exonic hg19 KIRC TCGA-B0-4688-01A 2 3 In-Frame Intra-chr q26.3 30841 ChimerSeq STARFusion TCGA_RNA-Seq FAM155A-TUBGCP2 FAM155A chr13 108518030 - TUBGCP2 chr10 135116484 - Exonic hg19 KIRC TCGA-B0-4688-01A 2 2 CDS-5'UTR Inter-chr q33.3 q26.3 Seq+ 30842 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1731-PTMS KIAA1731 chr11 93463314 + PTMS chr12 6878769 + Exonic hg19 KIRC TCGA-B0-4688-01A 2 0 In-Frame Inter-chr p13.31 30843 ChimerSeq STARFusion TCGA_RNA-Seq SHMT2-NDUFA4L2 SHMT2 chr12 57624783 + NDUFA4L2 chr12 57629592 - Exonic hg19 KIRC TCGA-CZ-5465-01A 2 1 Out-of-frame Intra-chr q13.3 q13.3 30844 ChimerSeq STARFusion TCGA_RNA-Seq DDX5-HNRPDL DDX5 chr17 62498557 - HNRPDL chr4 83346036 - Exonic hg19 KIRC TCGA-CZ-5465-01A 2 0 CDS-3'UTR Inter-chr q23.3 30845 ChimerSeq STARFusion TCGA_RNA-Seq LSM14A-GPI LSM14A chr19 34663668 + GPI chr19 34884153 + Exonic hg19 KIRC TCGA-CZ-5468-01A 70 341 Out-of-frame Intra-chr Seq+ 30846 ChimerSeq STARFusion TCGA_RNA-Seq LSM14A-GPI LSM14A chr19 34663668 + GPI chr19 34884633 + Exonic hg19 KIRC TCGA-CZ-5468-01A 18 341 In-Frame Intra-chr Seq+ 30847 ChimerSeq STARFusion TCGA_RNA-Seq LSM14A-GPI LSM14A chr19 34663668 + GPI chr19 34884819 + Exonic hg19 KIRC TCGA-CZ-5468-01A 9 341 Out-of-frame Intra-chr Seq+ 30848 ChimerSeq STARFusion TCGA_RNA-Seq SAE1-WDR18 SAE1 chr19 47658470 + WDR18 chr19 994019 + Exonic hg19 KIRC TCGA-CZ-5468-01A 16 117 In-Frame Intra-chr q13.32 p13.3 Seq+ 30849 ChimerSeq STARFusion TCGA_RNA-Seq SAE1-WDR18 SAE1 chr19 47658470 + WDR18 chr19 994212 + Exonic hg19 KIRC TCGA-CZ-5468-01A 4 117 In-Frame Intra-chr q13.32 p13.3 Seq+ 30850 ChimerSeq STARFusion TCGA_RNA-Seq FBN1-B2M FBN1 chr15 48888480 - B2M chr15 45007621 + Exonic hg19 KIRC TCGA-CZ-5468-01A 2 1 In-Frame Intra-chr q21.1 Oncogene 30851 ChimerSeq STARFusion TCGA_RNA-Seq ST7-EXOC4 ST7 chr7 116593745 + EXOC4 chr7 133314798 + Exonic hg19 KIRC TCGA-CZ-4860-01A 2 4 In-Frame Intra-chr q31.2 Tumor suppressor gene q33 Seq+ 30852 ChimerSeq STARFusion TCGA_RNA-Seq EDF1-NDUFV1 EDF1 chr9 139757740 - NDUFV1 chr11 67375867 + Exonic hg19 KIRC TCGA-CZ-4860-01A 2 0 In-Frame Inter-chr q34.3 q13.2 30853 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H8-TIA1 ZC3H8 chr2 112991697 - TIA1 chr2 70444126 - Exonic hg19 KIRC TCGA-CZ-4860-01A 2 0 In-Frame Intra-chr q14.1 Transcription factor p13.3 30854 ChimerSeq STARFusion TCGA_RNA-Seq PDE1A-PPP1R1C PDE1A chr2 183291305 - PPP1R1C chr2 182926169 + Exonic hg19 KIRC TCGA-BP-5006-01A 6 24 Out-of-frame Intra-chr q32.1 q31.3 Seq+ 30855 ChimerSeq STARFusion TCGA_RNA-Seq C3orf27-SCNM1 C3orf27 chr3 128294109 - SCNM1 chr1 151138947 + Exonic hg19 KIRC TCGA-BP-5006-01A 2 0 5'UTR-5'UTR Inter-chr q21.3 30856 ChimerSeq STARFusion TCGA_RNA-Seq PCCA-DIAPH3 PCCA chr13 100861717 + DIAPH3 chr13 60616954 - Exonic hg19 KIRC TCGA-BP-4173-01A 3 5 In-Frame Intra-chr q32.3 q21.2 Seq+ 30857 ChimerSeq STARFusion TCGA_RNA-Seq ATG2A-EFCAB6 ATG2A chr11 64680510 - EFCAB6 chr22 43936237 - Exonic hg19 KIRC TCGA-BP-4173-01A 2 8 In-Frame Inter-chr q13.1 q13.31 Seq+ 30858 ChimerSeq STARFusion TCGA_RNA-Seq MAFIP-PAPOLA MAFIP chr4_gl000194_random 112792 - PAPOLA chr14 97010486 + Exonic hg19 KIRC TCGA-BP-4173-01A 2 0 Out-of-frame Inter-chr q32.2 30859 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R2B-DOCK2 PPP2R2B chr5 146257565 - DOCK2 chr5 169435501 + Exonic hg19 KIRC TCGA-BP-4173-01A 2 0 Out-of-frame Intra-chr q32 q35.1 30860 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K7-PDGFRB MAP3K7 chr6 91266254 - PDGFRB chr5 149494024 - Exonic hg19 KIRC TCGA-BP-4790-01A 3 1 Out-of-frame Inter-chr q15 STE:STE11 Oncogene q32 Oncogene Seq+ 30861 ChimerSeq STARFusion TCGA_RNA-Seq RNFT1-VMP1 RNFT1 chr17 58039901 - VMP1 chr17 57917129 + Exonic hg19 KIRC TCGA-BP-4790-01A 2 1 In-Frame Intra-chr q23.1 q23.1 Seq+ 30862 ChimerSeq STARFusion TCGA_RNA-Seq NFIC-MXI1 NFIC chr19 3359683 + MXI1 chr10 111987947 + Exonic hg19 KIRC TCGA-BP-4790-01A 2 0 Out-of-frame Inter-chr p13.3 Transcription factor q25.2 Tumor suppressor gene Transcription factor 30863 ChimerSeq STARFusion TCGA_RNA-Seq PLEC-KANSL1 PLEC chr8 145047571 - KANSL1 chr17_ctg5_hap1 723025 + Exonic hg19 KIRC TCGA-B0-5698-01A 2 5 CDS-3'UTR Inter-chr q24.3 Seq+ 30864 ChimerSeq STARFusion TCGA_RNA-Seq AHSA2-KIAA1841 AHSA2 chr2 61413632 + KIAA1841 chr2 61361272 + Exonic hg19 KIRC TCGA-A3-3326-01A 5 6 Out-of-frame Intra-chr p15 p15 Seq+ 30865 ChimerSeq STARFusion TCGA_RNA-Seq HNF1B-ANAPC16 HNF1B chr17 36091586 - ANAPC16 chr10 73990124 + Exonic hg19 KIRC TCGA-CJ-4920-01A 2 9 In-Frame Inter-chr q12 Transcription factor q22.1 Seq+ 30866 ChimerSeq STARFusion TCGA_RNA-Seq AGRN-ISG15 AGRN chr1 957842 + ISG15 chr1 949364 + Exonic hg19 KIRC TCGA-CJ-4920-01A 2 3 Out-of-frame Intra-chr p36.33 p36.33 Tumor suppressor gene Seq+ 30867 ChimerSeq STARFusion TCGA_RNA-Seq SPOP-FAM117A SPOP chr17 47755295 - FAM117A chr17 47799956 - Exonic hg19 KIRC TCGA-B0-4713-01A 6 32 5'UTR-CDS Intra-chr q21.33 Oncogene Tumor suppressor gene q21.33 Seq+ 30868 ChimerSeq STARFusion TCGA_RNA-Seq SPOP-FAM117A SPOP chr17 47745389 - FAM117A chr17 47799956 - Exonic hg19 KIRC TCGA-B0-4713-01A 2 32 5'UTR-CDS Intra-chr q21.33 Oncogene Tumor suppressor gene q21.33 Seq+ 30869 ChimerSeq STARFusion TCGA_RNA-Seq TINAGL1-ACTG1 TINAGL1 chr1 32048842 + ACTG1 chr17 79478652 - Exonic hg19 KIRC TCGA-B0-5709-01A 2 0 Out-of-frame Inter-chr p35.2 q25.3 30870 ChimerSeq STARFusion TCGA_RNA-Seq TOMM20-LOC493754 TOMM20 chr1 235291913 - LOC493754 chr7 66019143 - Exonic hg19 KIRC TCGA-BP-5200-01A 3 1 Out-of-frame Inter-chr q42.3 30871 ChimerSeq STARFusion TCGA_RNA-Seq UFL1-HNRNPA1 UFL1 chr6 96969826 + HNRNPA1 chr12 54675579 + Exonic hg19 KIRC TCGA-CJ-4878-01A 4 2 Out-of-frame Inter-chr q16.1 Tumor suppressor gene q13.13 Seq+ 30872 ChimerSeq STARFusion TCGA_RNA-Seq UFL1-HNRNPA1P10 UFL1 chr6 96969826 + HNRNPA1P10 chr12 54675579 + Exonic hg19 KIRC TCGA-CJ-4878-01A 4 2 CDS-5'UTR Inter-chr q16.1 Tumor suppressor gene p13.2 30873 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-RFTN1 RNA45S5 chrUn_gl000220 115277 + RFTN1 chr3 16357561 - Exonic hg19 KIRC TCGA-CJ-4878-01A 3 1 Out-of-frame Inter-chr p24.3 30874 ChimerSeq STARFusion TCGA_RNA-Seq PPARD-SQSTM1 PPARD chr6 35314927 + SQSTM1 chr5 179263436 + Exonic hg19 KIRC TCGA-CJ-4878-01A 2 1 In-Frame Inter-chr p21.31 Transcription factor q35.3 30875 ChimerSeq STARFusion TCGA_RNA-Seq COL18A1-ADARB1 COL18A1 chr21 46825388 + ADARB1 chr21 46591525 + Exonic hg19 KIRC TCGA-CJ-4635-01A 8 94 CDS-5'UTR Intra-chr q22.3 q22.3 Tumor suppressor gene Seq+ 30876 ChimerSeq STARFusion TCGA_RNA-Seq RAF1-TMEM40 RAF1 chr3 12632297 - TMEM40 chr3 12791339 - Exonic hg19 KIRC TCGA-CJ-4635-01A 4 28 CDS-5'UTR Intra-chr p25.2 TKL:RAF Oncogene p25.2 Seq+ 30877 ChimerSeq STARFusion TCGA_RNA-Seq CTNND1-TMX2 CTNND1 chr11 57529518 + TMX2 chr11 57505080 + Exonic hg19 KIRC TCGA-BP-4962-01A 4 16 5'UTR-5'UTR Intra-chr q12.1 Tumor suppressor gene q12.1 Seq+ 30878 ChimerSeq STARFusion TCGA_RNA-Seq C8orf76-ATAD2 C8orf76 chr8 124250038 - ATAD2 chr8 124351686 - Exonic hg19 KIRC TCGA-BP-4962-01A 3 3 In-Frame Intra-chr q24.13 q24.13 Seq+ 30879 ChimerSeq STARFusion TCGA_RNA-Seq KLF6-ARMC4 KLF6 chr10 3822298 - ARMC4 chr10 28196706 - Exonic hg19 KIRC TCGA-BP-4962-01A 2 7 In-Frame Intra-chr p15.2 Oncogene Tumor suppressor gene Transcription factor p12.1 Seq+ 30880 ChimerSeq STARFusion TCGA_RNA-Seq LINC00670-MYOCD LINC00670 chr17 12494065 + MYOCD chr17 12608445 + Exonic hg19 KIRC TCGA-BP-4962-01A 2 2 Out-of-frame Intra-chr p12 p12 30881 ChimerSeq STARFusion TCGA_RNA-Seq TRADD-RNA45S5 TRADD chr16 67189062 - RNA45S5 chrUn_gl000220 114227 + Exonic hg19 KIRC TCGA-AS-3778-01A 3 7 Out-of-frame Inter-chr q22.1 30882 ChimerSeq STARFusion TCGA_RNA-Seq DOPEY2-RNA45S5 DOPEY2 chr21 37617496 + RNA45S5 chrUn_gl000220 115677 + Exonic hg19 KIRC TCGA-AK-3443-01A 3 3 Out-of-frame Inter-chr q22.12 30883 ChimerSeq STARFusion TCGA_RNA-Seq ITGAL-MCAM ITGAL chr16 30534277 + MCAM chr11 119179690 - Exonic hg19 KIRC TCGA-BP-4784-01A 12 1 Out-of-frame Inter-chr p11.2 q23.3 30884 ChimerSeq STARFusion TCGA_RNA-Seq ZSCAN30-PDXK ZSCAN30 chr18 32870048 - PDXK chr21 45153950 + Exonic hg19 KIRC TCGA-BP-4784-01A 2 0 5'UTR-CDS Inter-chr q12.2 Transcription factor q22.3 30885 ChimerSeq STARFusion TCGA_RNA-Seq RASSF8-SSPN RASSF8 chr12 26208379 + SSPN chr12 26377226 + Exonic hg19 KIRC TCGA-CJ-4889-01A 2 1 Out-of-frame Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 30886 ChimerSeq STARFusion TCGA_RNA-Seq TSC1-AK8 TSC1 chr9 135819930 - AK8 chr9 135602921 - Exonic hg19 KIRC TCGA-BP-5183-01A 2 4 5'UTR-CDS Intra-chr q34.13 Oncogene Tumor suppressor gene q34.13 Seq+ 30887 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP19-CYB5A ARHGAP19 chr10 99052329 - CYB5A chr18 71930712 - Exonic hg19 KIRC TCGA-AS-3777-01A 35 49 Out-of-frame Inter-chr q24.1 q22.3 Tumor suppressor gene Seq+ 30888 ChimerSeq STARFusion TCGA_RNA-Seq CPT1A-ANPEP CPT1A chr11 68609243 - ANPEP chr15 90328732 - Exonic hg19 KIRC TCGA-AS-3777-01A 20 16 5'UTR-CDS Inter-chr q13.3 q26.1 Seq+ 30889 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-KIAA0146 MKL1 chr22 41032482 - KIAA0146 chr8 48586363 + Exonic hg19 KIRC TCGA-AS-3777-01A 17 12 5'UTR-CDS Inter-chr q13.2 Seq+ 30890 ChimerSeq STARFusion TCGA_RNA-Seq ITGB1-FLNB ITGB1 chr10 33247073 - FLNB chr3 58153447 + Exonic hg19 KIRC TCGA-AS-3777-01A 14 19 5'UTR-CDS Inter-chr p11.22 Tumor suppressor gene p14.3 30891 ChimerSeq STARFusion TCGA_RNA-Seq CPM-GOLT1B CPM chr12 69326458 - GOLT1B chr12 21659819 + Exonic hg19 KIRC TCGA-AS-3777-01A 7 23 In-Frame Intra-chr q15 p12.1 Seq+ 30892 ChimerSeq STARFusion TCGA_RNA-Seq ADAM15-DCST1 ADAM15 chr1 155025253 + DCST1 chr1 155006448 + Exonic hg19 KIRC TCGA-AS-3777-01A 8 18 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 30893 ChimerSeq STARFusion TCGA_RNA-Seq CALD1-CGN CALD1 chr7 134576424 + CGN chr1 151490982 + Exonic hg19 KIRC TCGA-AS-3777-01A 4 12 CDS-5'UTR Inter-chr q33 q21.3 Seq+ 30894 ChimerSeq STARFusion TCGA_RNA-Seq SLCO2B1-HNF4A SLCO2B1 chr11 74870917 + HNF4A chr20 43034698 + Exonic hg19 KIRC TCGA-AS-3777-01A 3 13 5'UTR-CDS Inter-chr q13.4 q13.12 Tumor suppressor gene Transcription factor Seq+ 30895 ChimerSeq STARFusion TCGA_RNA-Seq SLCO2B1-HNF4A SLCO2B1 chr11 74870917 + HNF4A chr20 43031194 + Exonic hg19 KIRC TCGA-AS-3777-01A 3 13 5'UTR-CDS Inter-chr q13.4 q13.12 Tumor suppressor gene Transcription factor Seq+ 30896 ChimerSeq STARFusion TCGA_RNA-Seq ATP8B1-SLC50A1 ATP8B1 chr18 55362403 - SLC50A1 chr1 155108775 + Exonic hg19 KIRC TCGA-AS-3777-01A 4 2 Out-of-frame Inter-chr q21.31 q22 Seq+ 30897 ChimerSeq STARFusion TCGA_RNA-Seq C1orf174-CLCN7 C1orf174 chr1 3809447 - CLCN7 chr16 1509188 - Exonic hg19 KIRC TCGA-AS-3777-01A 2 3 In-Frame Inter-chr p36.32 p13.3 30898 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC25-ZNF483 DNAJC25 chr9 114394023 + ZNF483 chr9 114338645 + Exonic hg19 KIRC TCGA-AS-3777-01A 2 3 Out-of-frame Intra-chr q31.3 q31.3 Transcription factor 30899 ChimerSeq STARFusion TCGA_RNA-Seq TAF1D-EGLN1 TAF1D chr11 93474488 - EGLN1 chr1 231502221 - Exonic hg19 KIRC TCGA-AS-3777-01A 2 0 5'UTR-CDS Inter-chr q21 q42.2 Tumor suppressor gene 30900 ChimerSeq STARFusion TCGA_RNA-Seq TFE3-MED15 TFE3 chrX 48895535 - MED15 chr22 20936898 + Exonic hg19 KIRC TCGA-6D-AA2E-01A 9 53 In-Frame Inter-chr p11.23 Oncogene Transcription factor q11.21 Seq+ 30901 ChimerSeq STARFusion TCGA_RNA-Seq MED15-TFE3 MED15 chr22 20929519 + TFE3 chrX 48891766 - Exonic hg19 KIRC TCGA-6D-AA2E-01A 3 66 In-Frame Inter-chr q11.21 p11.23 Oncogene Transcription factor Seq+ 30902 ChimerSeq STARFusion TCGA_RNA-Seq SNORA50-CNOT1 SNORA50 chr16 58593708 - CNOT1 chr16 58594266 - Exonic hg19 KIRC TCGA-B2-5633-01A 4 10 3'UTR-CDS Intra-chr q23.3 q21 30903 ChimerSeq STARFusion TCGA_RNA-Seq MRPS6-SLC5A3 MRPS6 chr21 35497780 + SLC5A3 chr21 35475134 + Exonic hg19 KIRC TCGA-B2-5633-01A 4 1 CDS-3'UTR Intra-chr q22.11 q22.11 30904 ChimerSeq STARFusion TCGA_RNA-Seq RBM14-CCS RBM14 chr11 66393149 + CCS chr11 66361113 + Exonic hg19 KIRC TCGA-B0-4833-01A 3 5 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 Seq+ 30905 ChimerSeq STARFusion TCGA_RNA-Seq LYN-LOXL2 LYN chr8 56792662 + LOXL2 chr8 23225947 - Exonic hg19 KIRC TCGA-BP-5198-01A 3 1 5'UTR-5'UTR Intra-chr q12.1 TK:Src p21.3 30906 ChimerSeq STARFusion TCGA_RNA-Seq LOC646278-PDCD6IP LOC646278 chr15 29064144 + PDCD6IP chr3 33905498 + Exonic hg19 KIRC TCGA-BP-5198-01A 2 4 5'UTR-CDS Inter-chr p22.3 30907 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-CLTC RPS6KB1 chr17 57970686 + CLTC chr17 57762417 + Exonic hg19 KIRC TCGA-BP-5198-01A 2 1 In-Frame Intra-chr q23.1 Oncogene q23.1 30908 ChimerSeq STARFusion TCGA_RNA-Seq ITGAX-LAMTOR2 ITGAX chr16 31368685 + LAMTOR2 chr1 156027769 + Exonic hg19 KIRC TCGA-BP-5198-01A 2 0 Out-of-frame Inter-chr p11.2 q22 30909 ChimerSeq STARFusion TCGA_RNA-Seq LPHN3-AMTN LPHN3 chr4 62679607 + AMTN chr4 71389585 + Exonic hg19 KIRC TCGA-BP-5201-01A 2 7 Out-of-frame Intra-chr q13.3 Seq+ 30910 ChimerSeq STARFusion TCGA_RNA-Seq LOC285692-TAS2R1 LOC285692 chr5 9884035 - TAS2R1 chr5 9630104 - Exonic hg19 KIRC TCGA-B0-4827-01A 3 5 3'UTR-CDS Intra-chr p15.31 30911 ChimerSeq STARFusion TCGA_RNA-Seq REEP4-SMPD4 REEP4 chr8 21997476 - SMPD4 chr2 130910744 - Exonic hg19 KIRC TCGA-B0-4827-01A 2 0 In-Frame Inter-chr p21.3 q21.1 30912 ChimerSeq STARFusion TCGA_RNA-Seq RB1-ITM2B RB1 chr13 48881542 + ITM2B chr13 48827944 + Exonic hg19 KIRC TCGA-CZ-5985-01A 3 0 In-Frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Seq+ 30913 ChimerSeq STARFusion TCGA_RNA-Seq CHDH-SYTL2 CHDH chr3 53874956 - SYTL2 chr11 85411636 - Exonic hg19 KIRC TCGA-CZ-5985-01A 2 0 5'UTR-CDS Inter-chr p21.1 q14.1 30914 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPL-SIRT2 HNRNPL chr19 39337956 - SIRT2 chr19 39372131 - Exonic hg19 KIRC TCGA-B0-5116-01A 2 21 Out-of-frame Intra-chr Tumor suppressor gene Seq+ 30915 ChimerSeq STARFusion TCGA_RNA-Seq ARRB2-PLOD1 ARRB2 chr17 4621215 + PLOD1 chr1 12024232 + Exonic hg19 KIRC TCGA-BP-5182-01A 3 0 Out-of-frame Inter-chr p13.2 p36.22 30916 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-PMEPA1 RNA45S5 chrUn_gl000220 112182 + PMEPA1 chr20 56226921 - Exonic hg19 KIRC TCGA-BP-4352-01A 3 1 Out-of-frame Inter-chr q13.31 30917 ChimerSeq STARFusion TCGA_RNA-Seq GFM1-LRBA GFM1 chr3 158399946 + LRBA chr4 151770150 - Exonic hg19 KIRC TCGA-BP-4352-01A 2 0 In-Frame Inter-chr q25.32 q31.3 30918 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPUL1-SAE1 HNRNPUL1 chr19 41768487 + SAE1 chr19 47646751 + Exonic hg19 KIRC TCGA-BP-4352-01A 2 0 5'UTR-5'UTR Intra-chr q13.2 q13.32 30919 ChimerSeq STARFusion TCGA_RNA-Seq MTMR3-HORMAD2 MTMR3 chr22 30279348 + HORMAD2 chr22 30489905 + Exonic hg19 KIRC TCGA-BP-4352-01A 2 0 5'UTR-5'UTR Intra-chr q12.2 q12.2 Seq+ 30920 ChimerSeq STARFusion TCGA_RNA-Seq STX5-WDR74 STX5 chr11 62599426 - WDR74 chr11 62607131 - Exonic hg19 KIRC TCGA-BP-4331-01A 21 49 5'UTR-5'UTR Intra-chr q12.3 q12.3 Seq+ 30921 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A29-WARS SLC25A29 chr14 100765179 - WARS chr14 100813183 - Exonic hg19 KIRC TCGA-BP-4331-01A 5 6 Out-of-frame Intra-chr q32.2 q32.2 Seq+ 30922 ChimerSeq STARFusion TCGA_RNA-Seq PROSC-CHMP1A PROSC chr8 37623873 + CHMP1A chr16 89713739 - Exonic hg19 KIRC TCGA-AK-3427-01A 2 4 In-Frame Inter-chr q24.3 Seq+ 30923 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-EIF3K ACTN4 chr19 39138547 + EIF3K chr19 39116668 + Exonic hg19 KIRC TCGA-AK-3427-01A 2 1 In-Frame Intra-chr Seq+ 30924 ChimerSeq STARFusion TCGA_RNA-Seq HS3ST1-CNTN5 HS3ST1 chr4 11430323 - CNTN5 chr11 99426876 + Exonic hg19 KIRC TCGA-CZ-5982-01A 3 18 5'UTR-5'UTR Inter-chr p15.33 q22.1 Seq+ 30925 ChimerSeq STARFusion TCGA_RNA-Seq FAM172A-ERAP2 FAM172A chr5 93386436 - ERAP2 chr5 96251392 + Exonic hg19 KIRC TCGA-BP-5004-01A 2 14 Out-of-frame Intra-chr q15 Tumor suppressor gene q15 Seq+ 30926 ChimerSeq STARFusion TCGA_RNA-Seq C1RL-PRODH C1RL chr12 7254494 - PRODH chr22 18913235 - Exonic hg19 KIRC TCGA-A3-3370-01A 2 0 Out-of-frame Inter-chr p13.31 q11.21 Tumor suppressor gene 30927 ChimerSeq STARFusion TCGA_RNA-Seq ATP11A-C13orf35 ATP11A chr13 113344769 + C13orf35 chr13 113337588 + Exonic hg19 KIRC TCGA-BP-5173-01A 2 3 Out-of-frame Intra-chr q34 Seq+ 30928 ChimerSeq STARFusion TCGA_RNA-Seq STRN3-METTL3 STRN3 chr14 31404369 - METTL3 chr14 21972024 - Exonic hg19 KIRC TCGA-CJ-5677-01A 4 25 In-Frame Intra-chr q12 q11.2 Seq+ 30929 ChimerSeq STARFusion TCGA_RNA-Seq STRN3-METTL3 STRN3 chr14 31398407 - METTL3 chr14 21972024 - Exonic hg19 KIRC TCGA-CJ-5677-01A 2 25 In-Frame Intra-chr q12 q11.2 Seq+ 30930 ChimerSeq STARFusion TCGA_RNA-Seq GORASP2-WIPF1 GORASP2 chr2 171785913 + WIPF1 chr2 175450339 - Exonic hg19 KIRC TCGA-B0-5095-01A 2 30 CDS-5'UTR Intra-chr q31.1 q31.1 Seq+ 30931 ChimerSeq STARFusion TCGA_RNA-Seq LPCAT1-DAP LPCAT1 chr5 1523825 - DAP chr5 10683683 - Exonic hg19 KIRC TCGA-BP-5175-01A 19 36 Out-of-frame Intra-chr p15.2 Seq+ 30932 ChimerSeq STARFusion TCGA_RNA-Seq CLPTM1L-CDHR2 CLPTM1L chr5 1341786 - CDHR2 chr5 176008344 + Exonic hg19 KIRC TCGA-BP-5175-01A 13 57 In-Frame Intra-chr p15.33 q35.2 Seq+ 30933 ChimerSeq STARFusion TCGA_RNA-Seq PAIP2-CDC25C PAIP2 chr5 138677669 + CDC25C chr5 137627805 - Exonic hg19 KIRC TCGA-BP-5175-01A 8 69 5'UTR-CDS Intra-chr q31.2 Tumor suppressor gene q31.2 Seq+ 30934 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L4A-ATG10 EPB41L4A chr5 111754638 - ATG10 chr5 81548381 + Exonic hg19 KIRC TCGA-BP-5175-01A 3 22 In-Frame Intra-chr q22.2 q14.1 Seq+ 30935 ChimerSeq STARFusion TCGA_RNA-Seq PROSC-CHMP1A PROSC chr8 37623873 + CHMP1A chr16 89713739 - Exonic hg19 KIRC TCGA-AK-3453-01A 2 1 In-Frame Inter-chr q24.3 Seq+ 30936 ChimerSeq STARFusion TCGA_RNA-Seq SUGT1-NOL6 SUGT1 chr13 53237247 + NOL6 chr9 33472410 - Exonic hg19 KIRC TCGA-CW-6088-01A 3 1 In-Frame Inter-chr q14.3 p13.3 30937 ChimerSeq STARFusion TCGA_RNA-Seq ZNF607-PHB ZNF607 chr19 38187710 - PHB chr17 47482562 - Exonic hg19 KIRC TCGA-CZ-5454-01A 4 0 Out-of-frame Inter-chr q13.12 Transcription factor q21.33 Tumor suppressor gene 30938 ChimerSeq STARFusion TCGA_RNA-Seq NNMT-RBM7 NNMT chr11 114168880 + RBM7 chr11 114272420 + Exonic hg19 KIRC TCGA-CZ-5454-01A 2 1 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 30939 ChimerSeq STARFusion TCGA_RNA-Seq GPR34-CASK GPR34 chrX 41548337 + CASK chrX 41530783 - Exonic hg19 KIRC TCGA-CZ-5454-01A 2 0 5'UTR-CDS Intra-chr p11.4 p11.4 CAMK:CASK 30940 ChimerSeq STARFusion TCGA_RNA-Seq LNP1-CMSS1 LNP1 chr3 100121283 + CMSS1 chr3 99728975 + Exonic hg19 KIRC TCGA-B0-5712-01A 13 105 Out-of-frame Intra-chr q12.2 q12.1 30941 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D14-KIAA0232 TBC1D14 chr4 6925838 + KIAA0232 chr4 6873301 + Exonic hg19 KIRC TCGA-CZ-4866-01A 5 7 Out-of-frame Intra-chr p16.1 p16.1 Seq+ 30942 ChimerSeq STARFusion TCGA_RNA-Seq MFSD10-ZDHHC6 MFSD10 chr4 2934833 - ZDHHC6 chr10 114193039 - Exonic hg19 KIRC TCGA-CZ-4866-01A 2 0 In-Frame Inter-chr p16.3 q25.2 30943 ChimerSeq STARFusion TCGA_RNA-Seq SFMBT1-ABHD5 SFMBT1 chr3 53079832 - ABHD5 chr3 43743707 + Exonic hg19 KIRC TCGA-CZ-4861-01A 4 11 5'UTR-CDS Intra-chr p21.1 p21.33 Seq+ 30944 ChimerSeq STARFusion TCGA_RNA-Seq SLC9A3R1-RAB37 SLC9A3R1 chr17 72763115 + RAB37 chr17 72725395 + Exonic hg19 KIRC TCGA-B0-5075-01A 2 5 In-Frame Intra-chr q25.1 Tumor suppressor gene q25.1 Seq+ 30945 ChimerSeq STARFusion TCGA_RNA-Seq C3orf27-RRP12 C3orf27 chr3 128294109 - RRP12 chr10 99120375 - Exonic hg19 KIRC TCGA-BP-4989-01A 2 0 5'UTR-CDS Inter-chr q24.1 30946 ChimerSeq STARFusion TCGA_RNA-Seq TMEM63B-MRPL14 TMEM63B chr6 44122182 + MRPL14 chr6 44084366 - Exonic hg19 KIRC TCGA-B0-4836-01A 4 26 CDS-5'UTR Intra-chr p21.1 p21.1 Seq+ 30947 ChimerSeq STARFusion TCGA_RNA-Seq PXDC1-HCP5 PXDC1 chr6 3723140 - HCP5 chr6_cox_hap2 2942032 + Exonic hg19 KIRC TCGA-B0-4836-01A 3 0 Out-of-frame Inter-chr p25.2 p21.33 30948 ChimerSeq STARFusion TCGA_RNA-Seq RAB39A-CUL5 RAB39A chr11 107799521 + CUL5 chr11 107904528 + Exonic hg19 KIRC TCGA-A3-3331-01A 2 0 Out-of-frame Intra-chr q22.3 q22.3 Tumor suppressor gene 30949 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 KIRC TCGA-A3-3331-01A 2 0 In-Frame Intra-chr p11.21 p11.21 30950 ChimerSeq STARFusion TCGA_RNA-Seq SUGT1-NOL6 SUGT1 chr13 53237247 + NOL6 chr9 33472410 - Exonic hg19 KIRC TCGA-B0-5113-01A 2 1 In-Frame Inter-chr q14.3 p13.3 30951 ChimerSeq STARFusion TCGA_RNA-Seq IGLL5-GUSBP11 IGLL5 chr22 23237901 + GUSBP11 chr22 23980771 - Exonic hg19 KIRC TCGA-B0-5108-01A 8 1 Out-of-frame Intra-chr q11.22 q11.23 30952 ChimerSeq STARFusion TCGA_RNA-Seq PRKCA-SMAD2 PRKCA chr17 64302245 + SMAD2 chr18 45423180 - Exonic hg19 KIRC TCGA-B0-5108-01A 2 0 CDS-5'UTR Inter-chr q24.2 q21.1 Oncogene Tumor suppressor gene 30953 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983374 - RSRC2 chr12 122990253 - Exonic hg19 KIRC TCGA-B2-4102-01A 38 178 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 30954 ChimerSeq STARFusion TCGA_RNA-Seq FHIT-CAMK4 FHIT chr3 61027719 - CAMK4 chr5 110679722 + Exonic hg19 KIRC TCGA-B2-4102-01A 2 16 5'UTR-CDS Inter-chr p14.2 Tumor suppressor gene q22.1 Seq+ 30955 ChimerSeq STARFusion TCGA_RNA-Seq CHMP4B-RALY CHMP4B chr20 32399464 + RALY chr20 32619328 + Exonic hg19 KIRC TCGA-B0-4697-01A 2 0 CDS-5'UTR Intra-chr q11.22 q11.22 30956 ChimerSeq STARFusion TCGA_RNA-Seq TBP-SDF2 TBP chr6 170873720 + SDF2 chr17 26982501 - Exonic hg19 KIRC TCGA-B0-4697-01A 2 0 Out-of-frame Inter-chr q27 Transcription factor q11.2 30957 ChimerSeq STARFusion TCGA_RNA-Seq KIF1B-UBE4B KIF1B chr1 10292492 + UBE4B chr1 10231196 + Exonic hg19 KIRC TCGA-BP-4338-01A 3 6 Out-of-frame Intra-chr p36.22 Tumor suppressor gene p36.22 Tumor suppressor gene Seq+ 30958 ChimerSeq STARFusion TCGA_RNA-Seq IL20RB-C3orf27 IL20RB chr3 136677043 + C3orf27 chr3 128294229 - Exonic hg19 KIRC TCGA-BP-4338-01A 2 0 CDS-5'UTR Intra-chr q22.3 30959 ChimerSeq STARFusion TCGA_RNA-Seq SAR1A-PPA1 SAR1A chr10 71930169 - PPA1 chr10 71978573 - Exonic hg19 KIRC TCGA-BP-4338-01A 2 0 5'UTR-CDS Intra-chr q22.1 q22.1 30960 ChimerSeq STARFusion TCGA_RNA-Seq UBC-UBA52 UBC chr12 125398114 - UBA52 chr19 18685694 + Exonic hg19 KIRC TCGA-DV-5567-01A 5 3 Out-of-frame Inter-chr q24.31 p13.11 30961 ChimerSeq STARFusion TCGA_RNA-Seq MAP2K4-CCBL1 MAP2K4 chr17 11924318 + CCBL1 chr9 131600416 - Exonic hg19 KIRC TCGA-A3-3378-01A 3 0 Out-of-frame Inter-chr p12 STE:STE7 Oncogene Tumor suppressor gene Seq+ 30962 ChimerSeq STARFusion TCGA_RNA-Seq ACACA-DDX52 ACACA chr17 35766352 - DDX52 chr17 35993448 - Exonic hg19 KIRC TCGA-A3-3378-01A 2 0 Out-of-frame Intra-chr q12 Seq+ 30963 ChimerSeq STARFusion TCGA_RNA-Seq MEIS2-GALK2 MEIS2 chr15 37375972 - GALK2 chr15 49611801 + Exonic hg19 KIRC TCGA-BP-4165-01A 2 0 In-Frame Intra-chr q14 Transcription factor q21.1 30964 ChimerSeq STARFusion TCGA_RNA-Seq MINPP1-LOC728190 MINPP1 chr10 89280926 + LOC728190 chr10 89005969 - Exonic hg19 KIRC TCGA-BP-4964-01A 3 44 CDS-3'UTR Intra-chr q23.2 30965 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1244-LOC100130476 KIAA1244 chr6 138491850 + LOC100130476 chr6 138145714 - Exonic hg19 KIRC TCGA-CZ-4857-01A 2 5 Out-of-frame Intra-chr 30966 ChimerSeq STARFusion TCGA_RNA-Seq JMY-PAPD4 JMY chr5 78533505 + PAPD4 chr5 78915435 + Exonic hg19 KIRC TCGA-BP-5007-01A 2 4 CDS-5'UTR Intra-chr q14.1 q14.1 Seq+ 30967 ChimerSeq STARFusion TCGA_RNA-Seq PSMD6-PDE3B PSMD6 chr3 64004275 - PDE3B chr11 14856616 + Exonic hg19 KIRC TCGA-CJ-4876-01A 7 0 In-Frame Inter-chr p14.1 p15.2 30968 ChimerSeq STARFusion TCGA_RNA-Seq ACAD11-UBA5 ACAD11 chr3 132378447 - UBA5 chr3 132389042 + Exonic hg19 KIRC TCGA-BP-5174-01A 2 0 In-Frame Intra-chr q22.1 q22.1 30969 ChimerSeq STARFusion TCGA_RNA-Seq LOC100506688-DEFB125 LOC100506688 chr5 997386 - DEFB125 chr20 76646 + Exonic hg19 KIRC TCGA-A3-3328-01A 47 158 5'UTR-CDS Inter-chr p13 30970 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R1A-CENPP PPP2R1A chr19 52693427 + CENPP chr9 95373596 + Exonic hg19 KIRC TCGA-A3-3328-01A 8 21 In-Frame Inter-chr q13.41 Oncogene q22.31 Seq+ 30971 ChimerSeq STARFusion TCGA_RNA-Seq SLC23A2-TMX4 SLC23A2 chr20 4951439 - TMX4 chr20 7982188 - Exonic hg19 KIRC TCGA-A3-3328-01A 7 19 5'UTR-CDS Intra-chr p13 p12.3 Seq+ 30972 ChimerSeq STARFusion TCGA_RNA-Seq ZNF416-DTD1 ZNF416 chr19 58089425 - DTD1 chr20 18724744 + Exonic hg19 KIRC TCGA-A3-3328-01A 4 23 In-Frame Inter-chr q13.43 Transcription factor p11.23 Seq+ 30973 ChimerSeq STARFusion TCGA_RNA-Seq ZNF416-DTD1 ZNF416 chr19 58087172 - DTD1 chr20 18724744 + Exonic hg19 KIRC TCGA-A3-3328-01A 2 23 Out-of-frame Inter-chr q13.43 Transcription factor p11.23 Seq+ 30974 ChimerSeq STARFusion TCGA_RNA-Seq SEMA5A-TMX4 SEMA5A chr5 9379935 - TMX4 chr20 7990962 - Exonic hg19 KIRC TCGA-A3-3328-01A 2 2 Out-of-frame Inter-chr p15.31 p12.3 Seq+ 30975 ChimerSeq STARFusion TCGA_RNA-Seq CRYL1-SPACA7 CRYL1 chr13 21063509 - SPACA7 chr13 113088799 + Exonic hg19 KIRC TCGA-B0-5117-01A 3 9 Out-of-frame Intra-chr q12.11 Seq+ 30976 ChimerSeq STARFusion TCGA_RNA-Seq PDS5B-ATP8A2 PDS5B chr13 33160730 + ATP8A2 chr13 26343184 + Exonic hg19 KIRC TCGA-B0-5117-01A 2 1 5'UTR-CDS Intra-chr q13.1 Tumor suppressor gene q12.13 Seq+ 30977 ChimerSeq STARFusion TCGA_RNA-Seq RSRC1-MLF1 RSRC1 chr3 157921034 + MLF1 chr3 158310223 + Exonic hg19 KIRC TCGA-BP-5178-01A 40 54 In-Frame Intra-chr q25.32 q25.32 Seq+ 30978 ChimerSeq STARFusion TCGA_RNA-Seq SERINC5-ZFYVE16 SERINC5 chr5 79498705 - ZFYVE16 chr5 79729928 + Exonic hg19 KIRC TCGA-BP-5202-01A 2 8 CDS-5'UTR Intra-chr q14.1 q14.1 Seq+ 30979 ChimerSeq STARFusion TCGA_RNA-Seq TOMM20-LOC493754 TOMM20 chr1 235291913 - LOC493754 chr7 66019143 - Exonic hg19 KIRC TCGA-BP-5202-01A 3 2 Out-of-frame Inter-chr q42.3 30980 ChimerSeq STARFusion TCGA_RNA-Seq PRICKLE1-PPHLN1 PRICKLE1 chr12 42983267 - PPHLN1 chr12 42768665 + Exonic hg19 KIRC TCGA-BP-5202-01A 2 0 5'UTR-CDS Intra-chr q12 Tumor suppressor gene q12 30981 ChimerSeq STARFusion TCGA_RNA-Seq NDRG1-ST3GAL1 NDRG1 chr8 134296492 - ST3GAL1 chr8 134488843 - Exonic hg19 KIRC TCGA-B0-5400-01A 19 98 CDS-5'UTR Intra-chr q24.22 Tumor suppressor gene q24.22 Seq+ 30982 ChimerSeq STARFusion TCGA_RNA-Seq COPG2-CEP41 COPG2 chr7 130337709 - CEP41 chr7 130042640 - Exonic hg19 KIRC TCGA-B0-4691-01A 9 44 In-Frame Intra-chr q32.2 q32.2 Seq+ 30983 ChimerSeq STARFusion TCGA_RNA-Seq ENPEP-SEC31A ENPEP chr4 111441522 + SEC31A chr4 83740406 - Exonic hg19 KIRC TCGA-B0-4691-01A 2 0 Out-of-frame Intra-chr q25 q21.22 30984 ChimerSeq STARFusion TCGA_RNA-Seq FN1-WDSUB1 FN1 chr2 216298047 - WDSUB1 chr2 160105023 - Exonic hg19 KIRC TCGA-BP-5196-01A 161 497 In-Frame Intra-chr q35 Oncogene q24.2 Seq+ 30985 ChimerSeq STARFusion TCGA_RNA-Seq FN1-WDSUB1 FN1 chr2 216299419 - WDSUB1 chr2 160105023 - Exonic hg19 KIRC TCGA-BP-5196-01A 39 497 In-Frame Intra-chr q35 Oncogene q24.2 Seq+ 30986 ChimerSeq STARFusion TCGA_RNA-Seq LOC100288778-WASH3P LOC100288778 chr12 89018 + WASH3P chr15 102515210 + Exonic hg19 KIRC TCGA-BP-5199-01A 3 5 5'UTR-5'UTR Inter-chr q26.3 30987 ChimerSeq STARFusion TCGA_RNA-Seq CRLS1-NFX1 CRLS1 chr20 5996136 + NFX1 chr9 33328579 + Exonic hg19 KIRC TCGA-BP-5199-01A 2 2 In-Frame Inter-chr p12.3 p13.3 Transcription factor Seq+ 30988 ChimerSeq STARFusion TCGA_RNA-Seq SUGT1-NOL6 SUGT1 chr13 53237247 + NOL6 chr9 33472410 - Exonic hg19 KIRC TCGA-CW-6093-01A 3 2 In-Frame Inter-chr q14.3 p13.3 30989 ChimerSeq STARFusion TCGA_RNA-Seq FBXO17-C21orf7 FBXO17 chr19 39435609 - C21orf7 chr21 30547033 + Exonic hg19 KIRC TCGA-B0-5691-01A 2 0 Out-of-frame Inter-chr 30990 ChimerSeq STARFusion TCGA_RNA-Seq NUP205-WDR91 NUP205 chr7 135289208 + WDR91 chr7 134882903 - Exonic hg19 KIRC TCGA-B0-4690-01A 5 17 In-Frame Intra-chr q33 q33 Seq+ 30991 ChimerSeq STARFusion TCGA_RNA-Seq AHDC1-MORN1 AHDC1 chr1 27879403 - MORN1 chr1 2268289 - Exonic hg19 KIRC TCGA-B0-4690-01A 2 12 5'UTR-CDS Intra-chr p35.3 Transcription factor p36.32 Seq+ 30992 ChimerSeq STARFusion TCGA_RNA-Seq AHDC1-MORN1 AHDC1 chr1 27873772 - MORN1 chr1 2268289 - Exonic hg19 KIRC TCGA-B0-4690-01A 2 12 3'UTR-CDS Intra-chr p35.3 Transcription factor p36.32 Seq+ 30993 ChimerSeq STARFusion TCGA_RNA-Seq WDR93-IQGAP1 WDR93 chr15 90234088 + IQGAP1 chr15 90969342 + Exonic hg19 KIRC TCGA-B0-4690-01A 4 0 5'UTR-CDS Intra-chr q26.1 q26.1 30994 ChimerSeq STARFusion TCGA_RNA-Seq SEMA4B-FANCI SEMA4B chr15 90728313 + FANCI chr15 89790860 + Exonic hg19 KIRC TCGA-B0-4690-01A 2 2 5'UTR-5'UTR Intra-chr q26.1 q26.1 30995 ChimerSeq STARFusion TCGA_RNA-Seq ADAT3-GNAS ADAT3 chr19 1905438 + GNAS chr20 57470667 + Exonic hg19 KIRC TCGA-B0-4690-01A 2 0 5'UTR-5'UTR Inter-chr p13.3 q13.32 Oncogene 30996 ChimerSeq STARFusion TCGA_RNA-Seq SCAMP4-GNAS SCAMP4 chr19 1905438 + GNAS chr20 57470667 + Exonic hg19 KIRC TCGA-B0-4690-01A 2 0 5'UTR-5'UTR Inter-chr p13.3 q13.32 Oncogene 30997 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0391-FAM177A1 KIAA0391 chr14 35649983 + FAM177A1 chr14 35546356 + Exonic hg19 KIRC TCGA-B0-4849-01A 4 26 In-Frame Intra-chr q13.2 q13.2 Seq+ 30998 ChimerSeq STARFusion TCGA_RNA-Seq MCTP1-CBLB MCTP1 chr5 94204038 - CBLB chr3 105495386 - Exonic hg19 KIRC TCGA-B0-4849-01A 5 6 Out-of-frame Inter-chr q15 q13.11 Seq+ 30999 ChimerSeq STARFusion TCGA_RNA-Seq RCAN2-CYP39A1 RCAN2 chr6 46424489 - CYP39A1 chr6 46521591 - Exonic hg19 KIRC TCGA-BP-4994-01A 2 1 Out-of-frame Intra-chr p12.3 p12.3 31000 ChimerSeq STARFusion TCGA_RNA-Seq COL1A2-RNA45S5 COL1A2 chr7 94038687 + RNA45S5 chrUn_gl000220 118717 + Exonic hg19 KIRC TCGA-B2-3923-01A 4 1 Out-of-frame Inter-chr q21.3 31001 ChimerSeq STARFusion TCGA_RNA-Seq SNORA50-CNOT1 SNORA50 chr16 58593708 - CNOT1 chr16 58594266 - Exonic hg19 KIRC TCGA-B2-3923-01A 3 4 3'UTR-CDS Intra-chr q23.3 q21 31002 ChimerSeq STARFusion TCGA_RNA-Seq ZNF395-RNA45S5 ZNF395 chr8 28206730 - RNA45S5 chrUn_gl000220 114028 + Exonic hg19 KIRC TCGA-B2-3923-01A 3 1 Out-of-frame Inter-chr p21.1 Transcription factor 31003 ChimerSeq STARFusion TCGA_RNA-Seq MTDH-SNTB1 MTDH chr8 98657115 + SNTB1 chr8 121587465 - Exonic hg19 KIRC TCGA-B2-3923-01A 2 1 In-Frame Intra-chr q22.1 q24.12 31004 ChimerSeq STARFusion TCGA_RNA-Seq ZNF761-TPM3P9 ZNF761 chr19 53949590 + TPM3P9 chr19 53945049 + Exonic hg19 KIRC TCGA-B2-3923-01A 2 1 Out-of-frame Intra-chr q13.42 Transcription factor q13.42 31005 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-LSAMP ZBTB20 chr3 114412375 - LSAMP chr3 115529261 - Exonic hg19 KIRC TCGA-B0-5096-01A 2 6 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.31 Tumor suppressor gene Seq+ 31006 ChimerSeq STARFusion TCGA_RNA-Seq TBK1-XPOT TBK1 chr12 64854109 + XPOT chr12 64841885 + Exonic hg19 KIRC TCGA-B0-5096-01A 2 1 In-Frame Intra-chr q14.2 Other:IKK q14.2 31007 ChimerSeq STARFusion TCGA_RNA-Seq MBD5-IRG1 MBD5 chr2 149099905 + IRG1 chr13 77526624 + Exonic hg19 KIRC TCGA-B0-4706-01A 2 7 5'UTR-5'UTR Inter-chr q23.1 Seq+ 31008 ChimerSeq STARFusion TCGA_RNA-Seq ELL-CISD3 ELL chr19 18576222 - CISD3 chr17 36887013 + Exonic hg19 KIRC TCGA-B0-4945-01A 17 133 Out-of-frame Inter-chr p13.11 Seq+ 31009 ChimerSeq STARFusion TCGA_RNA-Seq CTIF-GRM4 CTIF chr18 46197115 + GRM4 chr6 34059876 - Exonic hg19 KIRC TCGA-B0-4945-01A 2 11 In-Frame Inter-chr p21.31 Seq+ 31010 ChimerSeq STARFusion TCGA_RNA-Seq AGRN-NOC4L AGRN chr1 957842 + NOC4L chr12 132635526 + Exonic hg19 KIRC TCGA-B8-A54I-01A 2 2 In-Frame Inter-chr p36.33 q24.33 Seq+ 31011 ChimerSeq STARFusion TCGA_RNA-Seq SMAD3-SLC9A9 SMAD3 chr15 67358698 + SLC9A9 chr3 142987831 - Exonic hg19 KIRC TCGA-CW-5581-01A 28 114 Out-of-frame Inter-chr q22.33 Transcription factor q24 Seq+ 31012 ChimerSeq STARFusion TCGA_RNA-Seq AASDH-CC2D2A AASDH chr4 57244314 - CC2D2A chr4 15564978 + Exonic hg19 KIRC TCGA-CW-5581-01A 5 19 In-Frame Intra-chr q12 p15.32 Seq+ 31013 ChimerSeq STARFusion TCGA_RNA-Seq ATP8A1-LDB2 ATP8A1 chr4 42658842 - LDB2 chr4 16760883 - Exonic hg19 KIRC TCGA-CW-5581-01A 7 7 Out-of-frame Intra-chr p13 p15.32 Seq+ 31014 ChimerSeq STARFusion TCGA_RNA-Seq COPZ1-ONECUT2 COPZ1 chr12 54718965 + ONECUT2 chr18 55143669 + Exonic hg19 KIRC TCGA-CW-5581-01A 3 1 Out-of-frame Inter-chr q13.13 q21.31 Transcription factor Seq+ 31015 ChimerSeq STARFusion TCGA_RNA-Seq GLIS3-PLGRKT GLIS3 chr9 4117768 - PLGRKT chr9 5361888 - Exonic hg19 KIRC TCGA-BP-5192-01A 20 52 In-Frame Intra-chr p24.2 Transcription factor p24.1 Seq+ 31016 ChimerSeq STARFusion TCGA_RNA-Seq RTF1-CATSPER2 RTF1 chr15 41730629 + CATSPER2 chr15 43932694 - Exonic hg19 KIRC TCGA-BP-5192-01A 5 26 Out-of-frame Intra-chr q15.1 q15.3 Seq+ 31017 ChimerSeq STARFusion TCGA_RNA-Seq CALCOCO2-ANKRD13A CALCOCO2 chr17 46926739 + ANKRD13A chr12 110461851 + Exonic hg19 KIRC TCGA-BP-5192-01A 6 6 Out-of-frame Inter-chr q21.32 q24.11 Seq+ 31018 ChimerSeq STARFusion TCGA_RNA-Seq MAP2K1-CUX1 MAP2K1 chr15 66679765 + CUX1 chr7 101870647 + Exonic hg19 KIRC TCGA-BP-5192-01A 2 14 Out-of-frame Inter-chr q22.31 STE:STE7 Oncogene q22.1 Tumor suppressor gene Transcription factor Seq+ 31019 ChimerSeq STARFusion TCGA_RNA-Seq RAB3IP-MYL4 RAB3IP chr12 70150443 + MYL4 chr17 45286755 + Exonic hg19 KIRC TCGA-BP-5192-01A 2 4 CDS-5'UTR Inter-chr q15 q21.32 Seq+ 31020 ChimerSeq STARFusion TCGA_RNA-Seq DDX19A-CIRH1A DDX19A chr16 70390150 + CIRH1A chr16 69167361 + Exonic hg19 KIRC TCGA-BP-5192-01A 2 3 CDS-5'UTR Intra-chr q22.1 Seq+ 31021 ChimerSeq STARFusion TCGA_RNA-Seq SFMBT2-GNAL SFMBT2 chr10 7409611 - GNAL chr18 11752852 + Exonic hg19 KIRC TCGA-A3-3367-01A 2 2 In-Frame Inter-chr p14 p11.21 31022 ChimerSeq STARFusion TCGA_RNA-Seq RREB1-KIAA1586 RREB1 chr6 7189555 + KIAA1586 chr6 56917484 + Exonic hg19 KIRC TCGA-B8-4153-01B 2 0 Out-of-frame Intra-chr p24.3 Transcription factor p12.1 31023 ChimerSeq STARFusion TCGA_RNA-Seq TNFAIP8L1-SPEF2 TNFAIP8L1 chr19 4639641 + SPEF2 chr5 35691139 + Exonic hg19 KIRC TCGA-B4-5377-01A 2 6 5'UTR-CDS Inter-chr p13.3 p13.2 Seq+ 31024 ChimerSeq STARFusion TCGA_RNA-Seq TGFB1-CCDC97 TGFB1 chr19 41847788 - CCDC97 chr19 41828500 + Exonic hg19 KIRC TCGA-BP-4761-01A 22 113 In-Frame Intra-chr q13.2 Tumor suppressor gene q13.2 Seq+ 31025 ChimerSeq STARFusion TCGA_RNA-Seq SNTB2-CIRH1A SNTB2 chr16 69221649 + CIRH1A chr16 69196986 + Exonic hg19 KIRC TCGA-BP-4761-01A 6 41 Out-of-frame Intra-chr Seq+ 31026 ChimerSeq STARFusion TCGA_RNA-Seq DHX33-NLRP1 DHX33 chr17 5364259 - NLRP1 chr17 5405192 - Exonic hg19 KIRC TCGA-BP-4761-01A 5 7 Out-of-frame Intra-chr p13.2 p13.2 Oncogene Seq+ 31027 ChimerSeq STARFusion TCGA_RNA-Seq CLSTN1-CTNNBIP1 CLSTN1 chr1 9883701 - CTNNBIP1 chr1 9910834 - Exonic hg19 KIRC TCGA-BP-4761-01A 4 4 In-Frame Intra-chr p36.22 p36.22 Tumor suppressor gene Seq+ 31028 ChimerSeq STARFusion TCGA_RNA-Seq STAMBP-TPRKB STAMBP chr2 74072389 + TPRKB chr2 73959412 - Exonic hg19 KIRC TCGA-BP-4761-01A 2 0 In-Frame Intra-chr p13.1 p13.1 31029 ChimerSeq STARFusion TCGA_RNA-Seq ST3GAL1-SKP1 ST3GAL1 chr8 134583936 - SKP1 chr5 133509713 - Exonic hg19 KIRC TCGA-CZ-4856-01A 2 0 5'UTR-5'UTR Inter-chr q24.22 q31.1 31030 ChimerSeq STARFusion TCGA_RNA-Seq LOC646214-PAK2 LOC646214 chr15 21932723 - PAK2 chr3 196559159 + Exonic hg19 KIRC TCGA-CZ-5469-01A 4 4 Out-of-frame Inter-chr q29 STE:STE20 31031 ChimerSeq STARFusion TCGA_RNA-Seq GLTSCR2-LOC440311 GLTSCR2 chr19 48259993 + LOC440311 chr15 95400130 + Exonic hg19 KIRC TCGA-B0-5702-01A 4 5 Out-of-frame Inter-chr Tumor suppressor gene 31032 ChimerSeq STARFusion TCGA_RNA-Seq GPR137B-EDARADD GPR137B chr1 236347206 + EDARADD chr1 236590692 + Exonic hg19 KIRC TCGA-CJ-5682-01A 5 2 Out-of-frame Intra-chr q42.3 q42.3 31033 ChimerSeq STARFusion TCGA_RNA-Seq GPR137B-EDARADD GPR137B chr1 236368550 + EDARADD chr1 236590692 + Exonic hg19 KIRC TCGA-CJ-5682-01A 2 2 Out-of-frame Intra-chr q42.3 q42.3 31034 ChimerSeq STARFusion TCGA_RNA-Seq GPR137B-EDARADD GPR137B chr1 236343328 + EDARADD chr1 236590692 + Exonic hg19 KIRC TCGA-CJ-5682-01A 2 2 Out-of-frame Intra-chr q42.3 q42.3 31035 ChimerSeq STARFusion TCGA_RNA-Seq SNORA50-CNOT1 SNORA50 chr16 58593708 - CNOT1 chr16 58594266 - Exonic hg19 KIRC TCGA-B2-3924-01A 9 20 3'UTR-CDS Intra-chr q23.3 q21 31036 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-SSH1 RNA45S5 chrUn_gl000220 113463 + SSH1 chr12 109181615 - Exonic hg19 KIRC TCGA-B2-3924-01A 9 1 Out-of-frame Inter-chr q24.11 31037 ChimerSeq STARFusion TCGA_RNA-Seq MLLT4-TTLL2 MLLT4 chr6 168227917 + TTLL2 chr6 167752135 + Exonic hg19 KIRC TCGA-B2-3924-01A 2 8 Out-of-frame Intra-chr q27 Seq+ 31038 ChimerSeq STARFusion TCGA_RNA-Seq GUSBP11-LOC100133050 GUSBP11 chr22 24002052 - LOC100133050 chr5 99717102 - Exonic hg19 KIRC TCGA-B2-3924-01A 2 3 3'UTR-3'UTR Inter-chr q11.23 31039 ChimerSeq STARFusion TCGA_RNA-Seq CNTLN-RFX3 CNTLN chr9 17226285 + RFX3 chr9 3248185 - Exonic hg19 KIRC TCGA-B0-4696-01A 5 27 Out-of-frame Intra-chr p22.2 p24.2 Transcription factor Seq+ 31040 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D5-HTT TBC1D5 chr3 17783973 - HTT chr4 3225133 + Exonic hg19 KIRC TCGA-B0-4696-01A 3 13 5'UTR-CDS Inter-chr p24.3 p16.3 Seq+ 31041 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D5-HTT TBC1D5 chr3 17783973 - HTT chr4 3224114 + Exonic hg19 KIRC TCGA-B0-4696-01A 2 13 5'UTR-CDS Inter-chr p24.3 p16.3 Seq+ 31042 ChimerSeq STARFusion TCGA_RNA-Seq KDM4C-RFX3 KDM4C chr9 6805774 + RFX3 chr9 3225280 - Exonic hg19 KIRC TCGA-B0-4696-01A 2 5 Out-of-frame Intra-chr p24.1 p24.2 Transcription factor Seq+ 31043 ChimerSeq STARFusion TCGA_RNA-Seq PIGU-C20orf203 PIGU chr20 33231968 - C20orf203 chr20 31239783 - Exonic hg19 KIRC TCGA-B0-4696-01A 2 1 CDS-5'UTR Intra-chr q11.22 q11.21 31044 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-BZW1 DNM2 chr19 10916643 + BZW1 chr2 201686870 + Exonic hg19 KIRC TCGA-B0-4696-01A 2 0 Out-of-frame Inter-chr p13.2 q33.1 31045 ChimerSeq STARFusion TCGA_RNA-Seq CUL3-DARS CUL3 chr2 225378241 - DARS chr2 136670136 - Exonic hg19 KIRC TCGA-CJ-4636-01A 2 0 In-Frame Intra-chr q36.2 q21.3 31046 ChimerSeq STARFusion TCGA_RNA-Seq GRIN2B-C12orf36 GRIN2B chr12 13768032 - C12orf36 chr12 13529227 - Exonic hg19 KIRC TCGA-CZ-4858-01A 8 3 Out-of-frame Intra-chr p13.1 31047 ChimerSeq STARFusion TCGA_RNA-Seq PABPC1-HNRNPH3 PABPC1 chr8 101727690 - HNRNPH3 chr10 70098897 + Exonic hg19 KIRC TCGA-CZ-4858-01A 2 0 In-Frame Inter-chr q22.3 q21.3 31048 ChimerSeq STARFusion TCGA_RNA-Seq THBS1-RPLP1 THBS1 chr15 39888996 + RPLP1 chr15 69745317 + Exonic hg19 KIRC TCGA-BP-4770-01A 3 1 Out-of-frame Intra-chr q14 Oncogene Tumor suppressor gene q23 31049 ChimerSeq STARFusion TCGA_RNA-Seq PRKCSH-PSMA1 PRKCSH chr19 11556271 + PSMA1 chr11 14526540 - Exonic hg19 KIRC TCGA-BP-4770-01A 3 0 Out-of-frame Inter-chr p13.2 p15.2 31050 ChimerSeq STARFusion TCGA_RNA-Seq BRCC3-FUNDC2 BRCC3 chrX 154319114 + FUNDC2 chrX 154274784 + Exonic hg19 KIRC TCGA-BP-4770-01A 2 0 In-Frame Intra-chr q28 q28 31051 ChimerSeq STARFusion TCGA_RNA-Seq NFKBIE-SLC29A1 NFKBIE chr6 44227780 - SLC29A1 chr6 44194997 + Exonic hg19 KIRC TCGA-A3-3311-01A 13 104 CDS-5'UTR Intra-chr p21.1 p21.1 Seq+ 31052 ChimerSeq STARFusion TCGA_RNA-Seq NFKBIE-SLC29A1 NFKBIE chr6 44227780 - SLC29A1 chr6 44195000 + Exonic hg19 KIRC TCGA-A3-3311-01A 4 104 CDS-5'UTR Intra-chr p21.1 p21.1 Seq+ 31053 ChimerSeq STARFusion TCGA_RNA-Seq FAM172A-FLJ42709 FAM172A chr5 93294482 - FLJ42709 chr5 92747215 - Exonic hg19 KIRC TCGA-A3-3311-01A 2 5 CDS-3'UTR Intra-chr q15 Tumor suppressor gene Seq+ 31054 ChimerSeq STARFusion TCGA_RNA-Seq UBE2E1-BRE UBE2E1 chr3 23853001 + BRE chr2 28561317 + Exonic hg19 KIRC TCGA-A3-3311-01A 2 0 In-Frame Inter-chr p24.2 31055 ChimerSeq STARFusion TCGA_RNA-Seq ARL15-PLS3 ARL15 chr5 53606262 - PLS3 chrX 114844555 + Exonic hg19 KIRC TCGA-B0-5102-01A 2 0 CDS-5'UTR Inter-chr q11.2 q23 31056 ChimerSeq STARFusion TCGA_RNA-Seq NFIC-DAZAP1 NFIC chr19 3359683 + DAZAP1 chr19 1417499 + Exonic hg19 KIRC TCGA-B0-5102-01A 2 0 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 31057 ChimerSeq STARFusion TCGA_RNA-Seq NHLRC3-EDEM2 NHLRC3 chr13 39613848 + EDEM2 chr20 33714178 - Exonic hg19 KIRC TCGA-B0-5102-01A 2 0 In-Frame Inter-chr q13.3 q11.22 31058 ChimerSeq STARFusion TCGA_RNA-Seq MCC-PSMD6 MCC chr5 112630026 - PSMD6 chr3 63996631 - Exonic hg19 KIRC TCGA-BP-4968-01A 56 97 Out-of-frame Inter-chr q22.2 Tumor suppressor gene p14.1 Seq+ 31059 ChimerSeq STARFusion TCGA_RNA-Seq PWP1-PRDM4 PWP1 chr12 108106074 + PRDM4 chr12 108133191 - Exonic hg19 KIRC TCGA-AK-3428-01A 3 0 Out-of-frame Intra-chr q23.3 q23.3 Tumor suppressor gene Transcription factor 31060 ChimerSeq STARFusion TCGA_RNA-Seq KANK1-DOCK8 KANK1 chr9 504754 + DOCK8 chr9 325671 + Exonic hg19 KIRC TCGA-A3-A8OX-01A 7 1 5'UTR-CDS Intra-chr p24.3 Tumor suppressor gene p24.3 Seq+ 31061 ChimerSeq STARFusion TCGA_RNA-Seq BNIP3L-XPA BNIP3L chr8 26265892 + XPA chr9 100437869 - Exonic hg19 KIRC TCGA-BP-4344-01A 2 0 Out-of-frame Inter-chr p21.2 Tumor suppressor gene q22.33 Oncogene Transcription factor 31062 ChimerSeq STARFusion TCGA_RNA-Seq EPHA7-CCNG2 EPHA7 chr6 94128963 - CCNG2 chr4 78079686 + Exonic hg19 KIRC TCGA-B8-4151-01A 2 1 CDS-5'UTR Inter-chr q16.1 Oncogene q21.1 31063 ChimerSeq STARFusion TCGA_RNA-Seq SFPQ-TFE3 SFPQ chr1 35652602 - TFE3 chrX 48891766 - Exonic hg19 KIRC TCGA-B8-5546-01A 69 294 In-Frame Inter-chr p34.3 p11.23 Oncogene Transcription factor KB Pub Seq+ 31064 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-CMSS1 ZBTB20 chr3 114057852 - CMSS1 chr3 99865817 + Exonic hg19 KIRC TCGA-CJ-5671-01A 3 13 Out-of-frame Intra-chr q13.31 Transcription factor q12.1 Seq+ 31065 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-CMSS1 ZBTB20 chr3 114069121 - CMSS1 chr3 99865817 + Exonic hg19 KIRC TCGA-CJ-5671-01A 3 13 Out-of-frame Intra-chr q13.31 Transcription factor q12.1 Seq+ 31066 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-CMSS1 ZBTB20 chr3 114099064 - CMSS1 chr3 99865817 + Exonic hg19 KIRC TCGA-CJ-5671-01A 2 13 Out-of-frame Intra-chr q13.31 Transcription factor q12.1 Seq+ 31067 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB38-ACPL2 ZBTB38 chr3 141122873 + ACPL2 chr3 140978965 + Exonic hg19 KIRC TCGA-CJ-5671-01A 2 1 5'UTR-5'UTR Intra-chr q23 Transcription factor Seq+ 31068 ChimerSeq STARFusion TCGA_RNA-Seq LOC645166-CYB5A LOC645166 chr1 148933368 + CYB5A chr18 71930712 - Exonic hg19 KIRC TCGA-BP-4169-01A 2 0 5'UTR-CDS Inter-chr q22.3 Tumor suppressor gene 31069 ChimerSeq STARFusion TCGA_RNA-Seq SLA-GSDMB SLA chr8 134060075 - GSDMB chr17 38063240 - Exonic hg19 KIRC TCGA-BP-4169-01A 2 0 In-Frame Inter-chr q24.22 q21.1 31070 ChimerSeq STARFusion TCGA_RNA-Seq AUH-TES AUH chr9 94058303 - TES chr7 115889074 + Exonic hg19 KIRC TCGA-A3-3358-01A 2 0 Out-of-frame Inter-chr q22.31 q31.2 Tumor suppressor gene 31071 ChimerSeq STARFusion TCGA_RNA-Seq PLCH1-PFKP PLCH1 chr3 155421935 - PFKP chr10 3141467 + Exonic hg19 KIRC TCGA-A3-3358-01A 2 0 5'UTR-CDS Inter-chr q25.31 p15.2 31072 ChimerSeq STARFusion TCGA_RNA-Seq CES4A-SORBS3 CES4A chr16 67038127 + SORBS3 chr8 22429853 + Exonic hg19 KIRC TCGA-B0-4714-01A 2 0 Out-of-frame Inter-chr q22.1 p21.3 31073 ChimerSeq STARFusion TCGA_RNA-Seq SLCO1B1-IAPP SLCO1B1 chr12 21377773 + IAPP chr12 21526271 + Exonic hg19 KIRC TCGA-B8-4620-01A 2 1 CDS-5'UTR Intra-chr p12.1 p12.1 Seq+ 31074 ChimerSeq STARFusion TCGA_RNA-Seq SEC23A-PHGDH SEC23A chr14 39562391 - PHGDH chr1 120277257 + Exonic hg19 KIRC TCGA-B8-4620-01A 2 0 In-Frame Inter-chr q21.1 p12 31075 ChimerSeq STARFusion TCGA_RNA-Seq C16orf72-PMM2 C16orf72 chr16 9197116 + PMM2 chr16 8941581 + Exonic hg19 KIRC TCGA-BP-4343-01A 2 2 Out-of-frame Intra-chr p13.2 p13.2 31076 ChimerSeq STARFusion TCGA_RNA-Seq AKT3-DESI2 AKT3 chr1 244006427 - DESI2 chr1 244849899 + Exonic hg19 KIRC TCGA-BP-4343-01A 2 0 Out-of-frame Intra-chr AGC:Akt Oncogene q44 31077 ChimerSeq STARFusion TCGA_RNA-Seq C11orf49-LARS C11orf49 chr11 46958402 + LARS chr5 145493874 - Exonic hg19 KIRC TCGA-BP-4343-01A 2 0 In-Frame Inter-chr p11.2 q32 31078 ChimerSeq STARFusion TCGA_RNA-Seq GNPTAB-RPS8 GNPTAB chr12 102179790 - RPS8 chr1 45243286 + Exonic hg19 KIRC TCGA-BP-4343-01A 2 0 CDS-3'UTR Inter-chr q23.2 p34.1 31079 ChimerSeq STARFusion TCGA_RNA-Seq RPL27-AARSD1 RPL27 chr17 41150848 + AARSD1 chr17 41103911 - Exonic hg19 KIRC TCGA-BP-4343-01A 2 0 In-Frame Intra-chr q21.31 q21.31 31080 ChimerSeq STARFusion TCGA_RNA-Seq ABCC3-BCAN ABCC3 chr17 48751019 + BCAN chr1 156627467 + Exonic hg19 KIRC TCGA-CW-5584-01A 6 11 In-Frame Inter-chr q21.33 q23.1 Seq+ 31081 ChimerSeq STARFusion TCGA_RNA-Seq MLLT4-TTLL2 MLLT4 chr6 168227917 + TTLL2 chr6 167752135 + Exonic hg19 KIRC TCGA-B2-3924-01A 4 32 Out-of-frame Intra-chr q27 Seq+ 31082 ChimerSeq STARFusion TCGA_RNA-Seq SUCLG2-NEK7 SUCLG2 chr3 67659879 - NEK7 chr1 198201683 + Exonic hg19 KIRC TCGA-CZ-5455-01A 2 0 CDS-5'UTR Inter-chr p14.1 q31.3 Other:NEK 31083 ChimerSeq STARFusion TCGA_RNA-Seq TRANK1-MAP4 TRANK1 chr3 36931320 - MAP4 chr3 47919013 - Exonic hg19 KIRC TCGA-CZ-5455-01A 2 0 In-Frame Intra-chr p22.2 p21.31 31084 ChimerSeq STARFusion TCGA_RNA-Seq IFNGR1-PEX7 IFNGR1 chr6 137540380 - PEX7 chr6 137219280 + Exonic hg19 KIRC TCGA-B8-A54H-01A 2 0 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 31085 ChimerSeq STARFusion TCGA_RNA-Seq CPQ-SDC2 CPQ chr8 97892233 + SDC2 chr8 97605708 + Exonic hg19 KIRC TCGA-BP-4775-01A 2 1 In-Frame Intra-chr q22.1 q22.1 31086 ChimerSeq STARFusion TCGA_RNA-Seq HES4-AFF1 HES4 chr1 935072 - AFF1 chr4 88005272 + Exonic hg19 KIRC TCGA-A3-3373-01A 4 46 In-Frame Inter-chr p36.33 Transcription factor q21.3 Oncogene Seq+ 31087 ChimerSeq STARFusion TCGA_RNA-Seq HES4-AFF1 HES4 chr1 935246 - AFF1 chr4 88005272 + Exonic hg19 KIRC TCGA-A3-3373-01A 3 46 In-Frame Inter-chr p36.33 Transcription factor q21.3 Oncogene Seq+ 31088 ChimerSeq STARFusion TCGA_RNA-Seq PTCHD3P1-LYZL1 PTCHD3P1 chr10 29704341 + LYZL1 chr10 29599039 + Exonic hg19 KIRC TCGA-B4-5832-01A 59 105 Out-of-frame Intra-chr p11.23 p12.1 31089 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 KIRC TCGA-CJ-5689-01A 2 1 CDS-5'UTR Intra-chr p12 p12 Transcription factor 31090 ChimerSeq STARFusion TCGA_RNA-Seq NAA50-DCBLD2 NAA50 chr3 113464789 - DCBLD2 chr3 98544210 - Exonic hg19 KIRC TCGA-CW-5588-01A 2 0 Out-of-frame Intra-chr q13.31 q12.1 31091 ChimerSeq STARFusion TCGA_RNA-Seq TFE3-SFPQ TFE3 chrX 48900637 - SFPQ chr1 35653691 - Exonic hg19 KIRC TCGA-AK-3456-01A 68 196 In-Frame Inter-chr p11.23 Oncogene Transcription factor p34.3 KB Seq+ 31092 ChimerSeq STARFusion TCGA_RNA-Seq SFPQ-TFE3 SFPQ chr1 35654604 - TFE3 chrX 48898095 - Exonic hg19 KIRC TCGA-AK-3456-01A 75 160 In-Frame Inter-chr p34.3 p11.23 Oncogene Transcription factor KB Pub Seq+ 31093 ChimerSeq STARFusion TCGA_RNA-Seq C3orf27-SCNM1 C3orf27 chr3 128294109 - SCNM1 chr1 151138947 + Exonic hg19 KIRC TCGA-CJ-4902-01A 2 0 5'UTR-5'UTR Inter-chr q21.3 31094 ChimerSeq STARFusion TCGA_RNA-Seq SEC14L1-SEPT9 SEC14L1 chr17 75139741 + SEPT9 chr17 75398141 + Exonic hg19 KIRC TCGA-BP-4799-01A 4 16 Out-of-frame Intra-chr q25.2 31095 ChimerSeq STARFusion TCGA_RNA-Seq LINC00478-HSD17B4 LINC00478 chr21 17909759 + HSD17B4 chr5 118850676 + Exonic hg19 KIRC TCGA-BP-4799-01A 2 0 5'UTR-CDS Inter-chr q23.1 31096 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-CD200R1 ZBTB20 chr3 114519948 - CD200R1 chr3 112666771 - Exonic hg19 KIRC TCGA-BP-4346-01A 6 30 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.2 Seq+ 31097 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-CD200R1 ZBTB20 chr3 114519948 - CD200R1 chr3 112650018 - Exonic hg19 KIRC TCGA-BP-4346-01A 2 30 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.2 Seq+ 31098 ChimerSeq STARFusion TCGA_RNA-Seq MAP7-ZBTB20 MAP7 chr6 136787899 - ZBTB20 chr3 114619189 - Exonic hg19 KIRC TCGA-BP-4346-01A 4 11 CDS-5'UTR Inter-chr q23.3 q13.31 Transcription factor Seq+ 31099 ChimerSeq STARFusion TCGA_RNA-Seq MAP7-ZBTB20 MAP7 chr6 136871480 - ZBTB20 chr3 114619189 - Exonic hg19 KIRC TCGA-BP-4346-01A 2 11 CDS-5'UTR Inter-chr q23.3 q13.31 Transcription factor Seq+ 31100 ChimerSeq STARFusion TCGA_RNA-Seq MTUS1-PDCD4 MTUS1 chr8 17532695 - PDCD4 chr10 112640991 + Exonic hg19 KIRC TCGA-A3-3362-01A 2 0 In-Frame Inter-chr p22 Tumor suppressor gene q25.2 Tumor suppressor gene 31101 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1467-EMP1 KIAA1467 chr12 13229077 + EMP1 chr12 13364403 + Exonic hg19 KIRC TCGA-B0-5094-01A 2 0 CDS-5'UTR Intra-chr p13.1 Tumor suppressor gene 31102 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R2B-ATG12 PPP2R2B chr5 146070691 - ATG12 chr5 115168361 - Exonic hg19 KIRC TCGA-B8-5551-01A 2 1 In-Frame Intra-chr q32 q22.3 31103 ChimerSeq STARFusion TCGA_RNA-Seq TMSB15B-H2BFXP TMSB15B chrX 103219195 + H2BFXP chrX 103316442 - Exonic hg19 KIRC TCGA-B0-5120-01A 3 2 CDS-3'UTR Intra-chr q22.2 31104 ChimerSeq STARFusion TCGA_RNA-Seq ARRB2-PLOD1 ARRB2 chr17 4621215 + PLOD1 chr1 12024232 + Exonic hg19 KIRC TCGA-CW-5580-01A 3 0 Out-of-frame Inter-chr p13.2 p36.22 31105 ChimerSeq STARFusion TCGA_RNA-Seq AKAP7-HIVEP2 AKAP7 chr6 131540948 + HIVEP2 chr6 143158184 - Exonic hg19 KIRC TCGA-AK-3429-01A 2 0 CDS-5'UTR Intra-chr q23.2 q24.2 Transcription factor 31106 ChimerSeq STARFusion TCGA_RNA-Seq PPIP5K1-CATSPER2 PPIP5K1 chr15 43857065 - CATSPER2 chr15 43924561 - Exonic hg19 KIRC TCGA-B0-4844-01A 2 2 In-Frame Intra-chr q15.3 q15.3 31107 ChimerSeq STARFusion TCGA_RNA-Seq RHOA-NICN1 RHOA chr3 49449253 - NICN1 chr3 49463861 - Exonic hg19 KIRC TCGA-A3-3387-01A 21 61 5'UTR-CDS Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Seq+ 31108 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-SNORD68 RNA45S5 chrUn_gl000220 109494 + SNORD68 chr16 89627862 + Exonic hg19 KIRC TCGA-B2-3924-01B 6 0 Out-of-frame Inter-chr q24.3 31109 ChimerSeq STARFusion TCGA_RNA-Seq MLLT4-TTLL2 MLLT4 chr6 168227917 + TTLL2 chr6 167752135 + Exonic hg19 KIRC TCGA-B2-3924-01B 2 5 Out-of-frame Intra-chr q27 Seq+ 31110 ChimerSeq STARFusion TCGA_RNA-Seq RSU1-CUBN RSU1 chr10 16794538 - CUBN chr10 17130344 - Exonic hg19 KIRC TCGA-B0-4848-01A 2 1 CDS-5'UTR Intra-chr p13 p13 31111 ChimerSeq STARFusion TCGA_RNA-Seq CFLAR-NDUFB3 CFLAR chr2 202005162 + NDUFB3 chr2 201950182 + Exonic hg19 KIRC TCGA-A3-3346-01A 2 1 Out-of-frame Intra-chr q33.1 q33.1 Seq+ 31112 ChimerSeq STARFusion TCGA_RNA-Seq NRG3-SCD NRG3 chr10 84118624 + SCD chr10 102114184 + Exonic hg19 KIRC TCGA-B8-5158-01A 3 6 Out-of-frame Intra-chr q23.1 q24.31 Seq+ 31113 ChimerSeq STARFusion TCGA_RNA-Seq LOC100130000-LINC00623 LOC100130000 chr1 143687284 + LINC00623 chr1 144301538 - Exonic hg19 KIRC TCGA-B0-5107-01A 3 2 Out-of-frame Intra-chr p11.2 31114 ChimerSeq STARFusion TCGA_RNA-Seq DCX-PASD1 DCX chrX 110574132 - PASD1 chrX 150828185 + Exonic hg19 KIRC TCGA-CJ-5681-01A 98 356 Out-of-frame Intra-chr q23 q28 Seq+ 31115 ChimerSeq STARFusion TCGA_RNA-Seq DCX-PASD1 DCX chrX 110574147 - PASD1 chrX 150828185 + Exonic hg19 KIRC TCGA-CJ-5681-01A 93 356 Out-of-frame Intra-chr q23 q28 Seq+ 31116 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC10-ZCCHC16 TRAPPC10 chr21 45504144 + ZCCHC16 chrX 111697728 + Exonic hg19 KIRC TCGA-CJ-5681-01A 12 68 CDS-5'UTR Inter-chr q22.3 Seq+ 31117 ChimerSeq STARFusion TCGA_RNA-Seq C21orf90-GABRA3 C21orf90 chr21 45937718 + GABRA3 chrX 151453207 - Exonic hg19 KIRC TCGA-CJ-5681-01A 17 39 5'UTR-CDS Inter-chr q28 Seq+ 31118 ChimerSeq STARFusion TCGA_RNA-Seq CRIM1-TACR1 CRIM1 chr2 36749456 + TACR1 chr2 75347894 - Exonic hg19 KIRC TCGA-CJ-5681-01A 13 53 Out-of-frame Intra-chr p22.2 p12 Seq+ 31119 ChimerSeq STARFusion TCGA_RNA-Seq DIP2A-THOC2 DIP2A chr21 47879135 + THOC2 chrX 122802165 - Exonic hg19 KIRC TCGA-CJ-5681-01A 18 27 Out-of-frame Inter-chr q22.3 q25 Seq+ 31120 ChimerSeq STARFusion TCGA_RNA-Seq CRIM1-TACR1 CRIM1 chr2 36764689 + TACR1 chr2 75347894 - Exonic hg19 KIRC TCGA-CJ-5681-01A 11 53 Out-of-frame Intra-chr p22.2 p12 Seq+ 31121 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC10-ZCCHC16 TRAPPC10 chr21 45506841 + ZCCHC16 chrX 111697728 + Exonic hg19 KIRC TCGA-CJ-5681-01A 6 68 CDS-5'UTR Inter-chr q22.3 Seq+ 31122 ChimerSeq STARFusion TCGA_RNA-Seq KHSRP-TFE3 KHSRP chr19 6415150 - TFE3 chrX 48895857 - Exonic hg19 KIRC TCGA-CJ-5681-01A 15 30 Out-of-frame Inter-chr p13.3 p11.23 Oncogene Transcription factor Seq+ 31123 ChimerSeq STARFusion TCGA_RNA-Seq LINC00189-TENM1 LINC00189 chr21 30566581 + TENM1 chrX 123775841 - Exonic hg19 KIRC TCGA-CJ-5681-01A 10 39 Out-of-frame Inter-chr q21.3 q25 31124 ChimerSeq STARFusion TCGA_RNA-Seq GABRA3-DIAPH2 GABRA3 chrX 151376473 - DIAPH2 chrX 96603080 + Exonic hg19 KIRC TCGA-CJ-5681-01A 7 44 Out-of-frame Intra-chr q28 q21.33 Seq+ 31125 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB21-PFKL ZBTB21 chr21 43430361 - PFKL chr21 45726564 + Exonic hg19 KIRC TCGA-CJ-5681-01A 12 14 Out-of-frame Intra-chr q22.3 Transcription factor q22.3 Seq+ 31126 ChimerSeq STARFusion TCGA_RNA-Seq PLAC1-DSCAM PLAC1 chrX 133736081 - DSCAM chr21 41561165 - Exonic hg19 KIRC TCGA-CJ-5681-01A 8 20 5'UTR-CDS Inter-chr q26.3 q22.2 Seq+ 31127 ChimerSeq STARFusion TCGA_RNA-Seq CXADR-CMC4 CXADR chr21 18885490 + CMC4 chrX 154292308 - Exonic hg19 KIRC TCGA-CJ-5681-01A 3 15 Out-of-frame Inter-chr q21.1 q28 Seq+ 31128 ChimerSeq STARFusion TCGA_RNA-Seq HUNK-MAMLD1 HUNK chr21 33246248 + MAMLD1 chrX 149638017 + Exonic hg19 KIRC TCGA-CJ-5681-01A 5 7 In-Frame Inter-chr q22.11 CAMK:CAMKL q28 Seq+ 31129 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB21-AIRE ZBTB21 chr21 43430361 - AIRE chr21 45716266 + Exonic hg19 KIRC TCGA-CJ-5681-01A 6 3 Out-of-frame Intra-chr q22.3 Transcription factor q22.3 Transcription factor Seq+ 31130 ChimerSeq STARFusion TCGA_RNA-Seq C2CD2-MID2 C2CD2 chr21 43373479 - MID2 chrX 107083900 + Exonic hg19 KIRC TCGA-CJ-5681-01A 2 14 Out-of-frame Inter-chr q22.3 q22.3 Seq+ 31131 ChimerSeq STARFusion TCGA_RNA-Seq FLJ22447-PRKCH FLJ22447 chr14 62037478 + PRKCH chr14 61909829 + Exonic hg19 KIRC TCGA-CJ-5681-01A 2 3 5'UTR-CDS Intra-chr q23.1 q23.1 31132 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT3-ARMCX2 AGPAT3 chr21 45285226 + ARMCX2 chrX 100913128 - Exonic hg19 KIRC TCGA-CJ-5681-01A 2 1 5'UTR-5'UTR Inter-chr q22.3 q22.1 31133 ChimerSeq STARFusion TCGA_RNA-Seq LCA5L-PCDH11Y LCA5L chr21 40816061 - PCDH11Y chrY 5369098 + Exonic hg19 KIRC TCGA-CJ-5681-01A 2 1 5'UTR-CDS Inter-chr q22.2 p11.2 31134 ChimerSeq STARFusion TCGA_RNA-Seq LHFPL2-HIST1H2BD LHFPL2 chr5 77928087 - HIST1H2BD chr6 26171203 + Exonic hg19 KIRC TCGA-CJ-5681-01A 2 0 5'UTR-3'UTR Inter-chr q14.1 p22.2 31135 ChimerSeq STARFusion TCGA_RNA-Seq RPF2-GTF3C6 RPF2 chr6 111306341 + GTF3C6 chr6 111288713 + Exonic hg19 KIRC TCGA-B8-5165-01A 75 191 Out-of-frame Intra-chr q21 q21 Seq+ 31136 ChimerSeq STARFusion TCGA_RNA-Seq DOCK4-IMMP2L DOCK4 chr7 111376973 - IMMP2L chr7 111161505 - Exonic hg19 KIRC TCGA-A3-3359-01A 3 11 CDS-5'UTR Intra-chr q31.1 q31.1 KB Pub Seq+ 31137 ChimerSeq STARFusion TCGA_RNA-Seq AUTS2-RNA45S5 AUTS2 chr7 69064616 + RNA45S5 chrUn_gl000220 117768 + Exonic hg19 KIRC TCGA-A3-3359-01A 4 1 Out-of-frame Inter-chr q11.22 31138 ChimerSeq STARFusion TCGA_RNA-Seq DOPEY2-RNA45S5 DOPEY2 chr21 37617496 + RNA45S5 chrUn_gl000220 115677 + Exonic hg19 KIRC TCGA-A3-3359-01A 3 3 Out-of-frame Inter-chr q22.12 31139 ChimerSeq STARFusion TCGA_RNA-Seq MOB1B-FIP1L1 MOB1B chr4 71768267 + FIP1L1 chr4 54249940 + Exonic hg19 KIRC TCGA-A3-3359-01A 2 0 Out-of-frame Intra-chr q13.3 Tumor suppressor gene q12 31140 ChimerSeq STARFusion TCGA_RNA-Seq ORC4-KLF7 ORC4 chr2 148778202 - KLF7 chr2 207989128 - Exonic hg19 KIRC TCGA-A3-3359-01A 2 0 5'UTR-CDS Intra-chr q23.1 q33.3 Transcription factor 31141 ChimerSeq STARFusion TCGA_RNA-Seq VAV2-RXRA VAV2 chr9 136804225 - RXRA chr9 137293478 + Exonic hg19 KIRC TCGA-A3-3349-01A 2 0 Out-of-frame Intra-chr q34.2 q34.2 Transcription factor Seq+ 31142 ChimerSeq STARFusion TCGA_RNA-Seq WSCD1-NLRP1 WSCD1 chr17 5998543 + NLRP1 chr17 5405192 - Exonic hg19 KIRC TCGA-CJ-5684-01A 4 8 Out-of-frame Intra-chr p13.2 p13.2 Oncogene Seq+ 31143 ChimerSeq STARFusion TCGA_RNA-Seq ZZEF1-ANKFY1 ZZEF1 chr17 4045836 - ANKFY1 chr17 4084667 - Exonic hg19 KIRC TCGA-CJ-4894-01A 4 40 In-Frame Intra-chr p13.2 p13.2 Seq+ 31144 ChimerSeq STARFusion TCGA_RNA-Seq ZZEF1-ANKFY1 ZZEF1 chr17 4045836 - ANKFY1 chr17 4085644 - Exonic hg19 KIRC TCGA-CJ-4894-01A 2 40 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 31145 ChimerSeq STARFusion TCGA_RNA-Seq PDGFRB-SPARC PDGFRB chr5 149534960 - SPARC chr5 151055762 - Exonic hg19 KIRC TCGA-BP-4349-01A 2 0 5'UTR-5'UTR Intra-chr q32 Oncogene q33.1 Tumor suppressor gene 31146 ChimerSeq STARFusion TCGA_RNA-Seq PDLIM1-CENPJ PDLIM1 chr10 97050577 - CENPJ chr13 25460523 - Exonic hg19 KIRC TCGA-BP-4349-01A 2 0 CDS-3'UTR Inter-chr q23.33 q12.13 31147 ChimerSeq STARFusion TCGA_RNA-Seq ABCC5-RAB11FIP3 ABCC5 chr3 183677521 - RAB11FIP3 chr16 546824 + Exonic hg19 KIRC TCGA-BP-4334-01A 2 0 Out-of-frame Inter-chr q27.1 31148 ChimerSeq STARFusion TCGA_RNA-Seq RHCG-MAN2C1 RHCG chr15 90022553 - MAN2C1 chr15 75649243 - Exonic hg19 KIRC TCGA-BP-4334-01A 2 0 In-Frame Intra-chr q26.1 q24.2 31149 ChimerSeq STARFusion TCGA_RNA-Seq WDR60-VIPR2 WDR60 chr7 158694507 + VIPR2 chr7 158851269 - Exonic hg19 KIRC TCGA-A3-3363-01A 11 25 In-Frame Intra-chr q36.3 q36.3 Seq+ 31150 ChimerSeq STARFusion TCGA_RNA-Seq WDR60-VIPR2 WDR60 chr7 158684024 + VIPR2 chr7 158851269 - Exonic hg19 KIRC TCGA-A3-3363-01A 5 25 In-Frame Intra-chr q36.3 q36.3 Seq+ 31151 ChimerSeq STARFusion TCGA_RNA-Seq AGAP3-MKLN1 AGAP3 chr7 150784159 + MKLN1 chr7 131071879 + Exonic hg19 KIRC TCGA-A3-3363-01A 4 3 Out-of-frame Intra-chr q36.1 q32.3 Seq+ 31152 ChimerSeq STARFusion TCGA_RNA-Seq SPARC-ATOX1 SPARC chr5 151066426 - ATOX1 chr5 151126010 - Exonic hg19 KIRC TCGA-B4-5838-01A 11 14 5'UTR-CDS Intra-chr q33.1 Tumor suppressor gene q33.1 Seq+ 31153 ChimerSeq STARFusion TCGA_RNA-Seq NDRG1-ST3GAL1 NDRG1 chr8 134296492 - ST3GAL1 chr8 134488843 - Exonic hg19 KIRC TCGA-B4-5838-01A 3 5 CDS-5'UTR Intra-chr q24.22 Tumor suppressor gene q24.22 Seq+ 31154 ChimerSeq STARFusion TCGA_RNA-Seq CCT3-VIM CCT3 chr1 156307945 - VIM chr10 17278293 + Exonic hg19 KIRC TCGA-B4-5838-01A 2 0 In-Frame Inter-chr q22 p13 Tumor suppressor gene 31155 ChimerSeq STARFusion TCGA_RNA-Seq TICAM1-VMP1 TICAM1 chr19 4831626 - VMP1 chr17 57889031 + Exonic hg19 KIRC TCGA-CJ-4901-01A 3 13 5'UTR-CDS Inter-chr p13.3 q23.1 Seq+ 31156 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V0D1-EIF4EBP3 ATP6V0D1 chr16 67514860 - EIF4EBP3 chr5 139928491 + Exonic hg19 KIRC TCGA-CJ-4901-01A 2 0 In-Frame Inter-chr q22.1 q31.3 31157 ChimerSeq STARFusion TCGA_RNA-Seq SPOP-UXT SPOP chr17 47699308 - UXT chrX 47516689 - Exonic hg19 KIRC TCGA-CJ-4901-01A 2 0 In-Frame Inter-chr q21.33 Oncogene Tumor suppressor gene p11.23 31158 ChimerSeq STARFusion TCGA_RNA-Seq MTF1-SERINC2 MTF1 chr1 38322923 - SERINC2 chr1 31905814 + Exonic hg19 KIRC TCGA-B8-5164-01A 8 20 Out-of-frame Intra-chr p34.3 Transcription factor p35.2 Seq+ 31159 ChimerSeq STARFusion TCGA_RNA-Seq CEP120-FBXW11 CEP120 chr5 122700190 - FBXW11 chr5 171327104 - Exonic hg19 KIRC TCGA-BP-4353-01A 2 0 Out-of-frame Intra-chr q23.2 q35.1 31160 ChimerSeq STARFusion TCGA_RNA-Seq MAGI1-TSEN2 MAGI1 chr3 65415195 - TSEN2 chr3 12570387 + Exonic hg19 KIRC TCGA-BP-4353-01A 2 0 In-Frame Intra-chr Oncogene p25.2 31161 ChimerSeq STARFusion TCGA_RNA-Seq PRKAR1B-BRI3 PRKAR1B chr7 716866 - BRI3 chr7 97920423 + Exonic hg19 KIRC TCGA-BP-4353-01A 2 0 In-Frame Intra-chr p22.3 q21.3 31162 ChimerSeq STARFusion TCGA_RNA-Seq DANCR-FAM192A DANCR chr4 53579126 + FAM192A chr16 57207781 - Exonic hg19 KIRC TCGA-BP-4337-01A 2 0 5'UTR-5'UTR Inter-chr q12 q13 Seq+ 31163 ChimerSeq STARFusion TCGA_RNA-Seq SOGA2-LRRC41 SOGA2 chr18 8826230 + LRRC41 chr1 46764042 - Exonic hg19 KIRC TCGA-AK-3445-01A 3 15 Out-of-frame Inter-chr p33 31164 ChimerSeq STARFusion TCGA_RNA-Seq CPQ-SDC2 CPQ chr8 97657630 + SDC2 chr8 97605708 + Exonic hg19 KIRC TCGA-AK-3445-01A 2 3 5'UTR-CDS Intra-chr q22.1 q22.1 31165 ChimerSeq STARFusion TCGA_RNA-Seq HCG17-OCIAD1 HCG17 chr6_dbb_hap3 1587434 - OCIAD1 chr4 48859230 + Exonic hg19 KIRC TCGA-AK-3445-01A 2 0 Out-of-frame Inter-chr p11 31166 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-FMR1NB NCOR2 chr12 124882665 - FMR1NB chrX 147084721 + Exonic hg19 KIRC TCGA-B0-4699-01A 3 5 In-Frame Inter-chr q24.31 q27.3 Seq+ 31167 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-LOC100506844 CTDSP2 chr12 58240155 - LOC100506844 chr12 58329336 - Exonic hg19 KIRC TCGA-B0-4699-01A 2 2 CDS-3'UTR Intra-chr q14.1 31168 ChimerSeq STARFusion TCGA_RNA-Seq MANBA-UBE2D3 MANBA chr4 103681875 - UBE2D3 chr4 103731012 - Exonic hg19 KIRC TCGA-B0-4699-01A 2 1 In-Frame Intra-chr q24 q24 31169 ChimerSeq STARFusion TCGA_RNA-Seq ABI3BP-NBPF9 ABI3BP chr3 100493449 - NBPF9 chr1 144828541 + Exonic hg19 KIRC TCGA-CJ-4640-01A 30 118 Out-of-frame Inter-chr q12.2 q21.2 Seq+ 31170 ChimerSeq STARFusion TCGA_RNA-Seq DHX33-NLRP1 DHX33 chr17 5364259 - NLRP1 chr17 5405192 - Exonic hg19 KIRC TCGA-CJ-4640-01A 5 27 Out-of-frame Intra-chr p13.2 p13.2 Oncogene Seq+ 31171 ChimerSeq STARFusion TCGA_RNA-Seq LOC283194-GLYATL1 LOC283194 chr11 58818733 - GLYATL1 chr11 58722243 + Exonic hg19 KIRC TCGA-CJ-4640-01A 2 1 3'UTR-CDS Intra-chr q12.1 31172 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP1-DNM3OS CTDSP1 chr2 219267128 + DNM3OS chr1 172113577 - Exonic hg19 KIRC TCGA-CJ-4907-01A 3 1 CDS-3'UTR Inter-chr q35 q24.3 31173 ChimerSeq STARFusion TCGA_RNA-Seq POMGNT1-SESN2 POMGNT1 chr1 46657770 - SESN2 chr1 28607227 + Exonic hg19 KIRC TCGA-CZ-5453-01A 2 0 In-Frame Intra-chr p34.1 p35.3 31174 ChimerSeq STARFusion TCGA_RNA-Seq SDHAP3-TERT SDHAP3 chr5 1574297 - TERT chr5 1282739 - Exonic hg19 KIRC TCGA-BP-5010-01A 2 8 3'UTR-CDS Intra-chr p15.33 p15.33 Oncogene 31175 ChimerSeq STARFusion TCGA_RNA-Seq CC2D2A-FBXL5 CC2D2A chr4 15482451 + FBXL5 chr4 15646331 - Exonic hg19 KIRC TCGA-AK-3425-01A 2 0 Out-of-frame Intra-chr p15.32 p15.32 31176 ChimerSeq STARFusion TCGA_RNA-Seq CMIP-BCR CMIP chr16 81479146 + BCR chr22 23595986 + Exonic hg19 KIRC TCGA-AK-3425-01A 2 0 Out-of-frame Inter-chr q23.2 q11.23 Atypical:BCR Oncogene Tumor suppressor gene 31177 ChimerSeq STARFusion TCGA_RNA-Seq ARF1-COA6 ARF1 chr1 228270466 + COA6 chr1 234509976 + Exonic hg19 KIRC TCGA-BP-4176-01A 3 2 Out-of-frame Intra-chr q42.13 Tumor suppressor gene q42.2 31178 ChimerSeq STARFusion TCGA_RNA-Seq GUSBP4-NDST3 GUSBP4 chr6 58285306 - NDST3 chr4 119026173 + Exonic hg19 KIRC TCGA-CJ-4643-01A 3 4 3'UTR-CDS Inter-chr p11.2 q26 31179 ChimerSeq STARFusion TCGA_RNA-Seq LOC646214-PAK2 LOC646214 chr15 21932716 - PAK2 chr3 196559166 + Exonic hg19 KIRC TCGA-CJ-6030-01A 3 6 Out-of-frame Inter-chr q29 STE:STE20 31180 ChimerSeq STARFusion TCGA_RNA-Seq TEAD4-TULP3 TEAD4 chr12 3121398 + TULP3 chr12 3018695 + Exonic hg19 KIRC TCGA-CJ-6030-01A 2 6 Out-of-frame Intra-chr p13.33 Transcription factor p13.33 Seq+ 31181 ChimerSeq STARFusion TCGA_RNA-Seq ELOF1-RDH8 ELOF1 chr19 11670006 - RDH8 chr19 10127733 + Exonic hg19 KIRC TCGA-B0-5084-01A 101 21 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 31182 ChimerSeq STARFusion TCGA_RNA-Seq ZNF345-ETFB ZNF345 chr19 37341870 + ETFB chr19 51857562 - Exonic hg19 KIRC TCGA-CJ-4875-01A 2 0 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.41 31183 ChimerSeq STARFusion TCGA_RNA-Seq CRIM1-EEF1B2 CRIM1 chr2 36669878 + EEF1B2 chr2 207024637 + Exonic hg19 KIRC TCGA-BP-4774-01A 2 6 CDS-5'UTR Intra-chr p22.2 Seq+ 31184 ChimerSeq STARFusion TCGA_RNA-Seq VWF-TCHP VWF chr12 6061557 - TCHP chr12 110354396 + Exonic hg19 KIRC TCGA-AK-3444-01A 2 2 In-Frame Intra-chr p13.31 q24.11 Tumor suppressor gene 31185 ChimerSeq STARFusion TCGA_RNA-Seq TIMMDC1-RFESD TIMMDC1 chr3 119222868 + RFESD chr5 94992656 + Exonic hg19 KIRC TCGA-B0-4810-01A 4 35 CDS-3'UTR Inter-chr q13.33 q15 Seq+ 31186 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPK-PFKP HNRNPK chr9 86595068 - PFKP chr10 3172011 + Exonic hg19 KIRC TCGA-B0-4810-01A 2 1 5'UTR-CDS Inter-chr q21.32 p15.2 Seq+ 31187 ChimerSeq STARFusion TCGA_RNA-Seq MYO6-FRA10AC1 MYO6 chr6 76459140 + FRA10AC1 chr10 95447206 - Exonic hg19 KIRC TCGA-B0-4810-01A 2 0 5'UTR-CDS Inter-chr q14.1 q23.33 31188 ChimerSeq STARFusion TCGA_RNA-Seq SUGT1-NOL6 SUGT1 chr13 53237247 + NOL6 chr9 33472410 - Exonic hg19 KIRC TCGA-CJ-5686-01A 4 2 In-Frame Inter-chr q14.3 p13.3 31189 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-LOC100507412 RCC1 chr1 28834672 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 KIRC TCGA-B0-5109-01A 7 15 5'UTR-5'UTR Inter-chr p35.3 31190 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-LOC100507412 SNHG3 chr1 28834672 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 KIRC TCGA-B0-5109-01A 7 15 5'UTR-5'UTR Inter-chr p35.3 31191 ChimerSeq STARFusion TCGA_RNA-Seq APC-ALDH1L1 APC chr5 112043579 + ALDH1L1 chr3 125879845 - Exonic hg19 KIRC TCGA-CJ-4886-01A 9 50 CDS-5'UTR Inter-chr q22.2 Oncogene Tumor suppressor gene q21.3 Seq+ 31192 ChimerSeq STARFusion TCGA_RNA-Seq C8orf87-TRIQK C8orf87 chr8 94178960 - TRIQK chr8 93966792 - Exonic hg19 KIRC TCGA-A3-3323-01A 2 13 CDS-5'UTR Intra-chr q22.1 q22.1 31193 ChimerSeq STARFusion TCGA_RNA-Seq PGPEP1-C10orf76 PGPEP1 chr19 18453721 + C10orf76 chr10 103773781 - Exonic hg19 KIRC TCGA-A3-3323-01A 2 0 In-Frame Inter-chr p13.11 q24.32 31194 ChimerSeq STARFusion TCGA_RNA-Seq IL34-ARG2 IL34 chr16 70613952 + ARG2 chr14 68087611 + Exonic hg19 KIRC TCGA-B2-4098-01A 2 8 5'UTR-5'UTR Inter-chr q22.1 q24.1 Seq+ 31195 ChimerSeq STARFusion TCGA_RNA-Seq LARP1-FTL LARP1 chr5 154194908 + FTL chr19 49468820 + Exonic hg19 KIRC TCGA-BP-4972-01A 3 1 Out-of-frame Inter-chr q33.2 q13.33 Seq+ 31196 ChimerSeq STARFusion TCGA_RNA-Seq BHMT-PTPN4 BHMT chr5 78423806 + PTPN4 chr2 120620112 + Exonic hg19 KIRC TCGA-B0-4816-01A 2 0 Out-of-frame Inter-chr q14.1 q14.2 31197 ChimerSeq STARFusion TCGA_RNA-Seq C3orf27-SCNM1 C3orf27 chr3 128294109 - SCNM1 chr1 151138947 + Exonic hg19 KIRC TCGA-B0-4816-01A 2 0 5'UTR-5'UTR Inter-chr q21.3 31198 ChimerSeq STARFusion TCGA_RNA-Seq SLC6A8-VIM SLC6A8 chrX 152958975 + VIM chr10 17271776 + Exonic hg19 KIRC TCGA-B8-4143-01A 3 2 Out-of-frame Inter-chr q28 p13 Tumor suppressor gene 31199 ChimerSeq STARFusion TCGA_RNA-Seq SNORA50-CNOT1 SNORA50 chr16 58593708 - CNOT1 chr16 58594266 - Exonic hg19 KIRC TCGA-B2-5635-01A 4 21 3'UTR-CDS Intra-chr q23.3 q21 31200 ChimerSeq STARFusion TCGA_RNA-Seq FBXO34-RALYL FBXO34 chr14 55738255 + RALYL chr8 85686814 + Exonic hg19 KIRC TCGA-CZ-4865-01A 3 23 5'UTR-CDS Inter-chr q22.3 q21.2 Seq+ 31201 ChimerSeq STARFusion TCGA_RNA-Seq GLI3-C7orf10 GLI3 chr7 42262729 - C7orf10 chr7 40789033 + Exonic hg19 KIRC TCGA-CJ-5683-01A 17 71 Out-of-frame Intra-chr p14.1 Transcription factor Seq+ 31202 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992064 + VMP1 chr17 57917129 + Exonic hg19 KIRC TCGA-CJ-5683-01A 2 2 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 31203 ChimerSeq STARFusion TCGA_RNA-Seq DGCR2-LOC100507412 DGCR2 chr22 19109641 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 KIRC TCGA-BP-4763-01A 27 15 CDS-5'UTR Inter-chr q11.21 31204 ChimerSeq STARFusion TCGA_RNA-Seq PREX2-GATAD2A PREX2 chr8 69012078 + GATAD2A chr19 19576149 + Exonic hg19 KIRC TCGA-BP-4763-01A 2 0 CDS-5'UTR Inter-chr q13.2 p13.11 Transcription factor 31205 ChimerSeq STARFusion TCGA_RNA-Seq SULF2-SRGAP2 SULF2 chr20 46331263 - SRGAP2 chr1 206589249 + Exonic hg19 KIRC TCGA-BP-4763-01A 2 0 In-Frame Inter-chr q13.12 q32.1 Tumor suppressor gene 31206 ChimerSeq STARFusion TCGA_RNA-Seq TMEM237-ENO1 TMEM237 chr2 202487947 - ENO1 chr1 8932002 - Exonic hg19 KIRC TCGA-BP-4982-01A 3 1 Out-of-frame Inter-chr q33.1 p36.23 31207 ChimerSeq STARFusion TCGA_RNA-Seq NT5C2-C20orf111 NT5C2 chr10 104934615 - C20orf111 chr20 42835638 - Exonic hg19 KIRC TCGA-BP-4982-01A 2 0 CDS-5'UTR Inter-chr q24.33 31208 ChimerSeq STARFusion TCGA_RNA-Seq LOC100996307-ZFAND5 LOC100996307 chr19 42989415 + ZFAND5 chr9 74970987 - Exonic hg19 KIRC TCGA-GK-A6C7-01A 3 2 Out-of-frame Inter-chr q21.13 31209 ChimerSeq STARFusion TCGA_RNA-Seq LOC255130-PTMS LOC255130 chr4 57976081 + PTMS chr12 6879765 + Exonic hg19 KIRC TCGA-B0-4818-01A 3 2 Out-of-frame Inter-chr p13.31 31210 ChimerSeq STARFusion TCGA_RNA-Seq NLK-KALRN NLK chr17 26512291 + KALRN chr3 124281690 + Exonic hg19 KIRC TCGA-BP-4798-01A 5 8 In-Frame Inter-chr q11.2 CMGC:MAPK q21.1 Seq+ 31211 ChimerSeq STARFusion TCGA_RNA-Seq GFPT1-NFU1 GFPT1 chr2 69614197 - NFU1 chr2 69646736 - Exonic hg19 KIRC TCGA-B0-5701-01A 6 49 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 31212 ChimerSeq STARFusion TCGA_RNA-Seq GFPT1-NFU1 GFPT1 chr2 69614197 - NFU1 chr2 69650849 - Exonic hg19 KIRC TCGA-B0-5701-01A 4 49 In-Frame Intra-chr p13.3 p13.3 Seq+ 31213 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-FADD PPFIA1 chr11 70118542 + FADD chr11 70052239 + Exonic hg19 KIRC TCGA-B0-5701-01A 2 4 Out-of-frame Intra-chr q13.3 q13.3 Tumor suppressor gene Seq+ 31214 ChimerSeq STARFusion TCGA_RNA-Seq C3-RNA45S5 C3 chr19 6712279 - RNA45S5 chrUn_gl000220 115914 + Exonic hg19 KIRC TCGA-B0-4842-01A 3 1 Out-of-frame Inter-chr p13.3 31215 ChimerSeq STARFusion TCGA_RNA-Seq PSAP-MRPL53 PSAP chr10 73587812 - MRPL53 chr2 74699533 - Exonic hg19 KIRC TCGA-B0-4842-01A 3 0 Out-of-frame Inter-chr q22.1 p13.1 31216 ChimerSeq STARFusion TCGA_RNA-Seq PDZRN3-LOC440970 PDZRN3 chr3 73651505 - LOC440970 chr3 84917819 - Exonic hg19 KIRC TCGA-A3-3316-01A 2 0 CDS-3'UTR Intra-chr p13 31217 ChimerSeq STARFusion TCGA_RNA-Seq GNL3-RAB3GAP1 GNL3 chr3 52725087 + RAB3GAP1 chr2 135848568 + Exonic hg19 KIRC TCGA-BP-5001-01A 2 1 Out-of-frame Inter-chr p21.1 q21.3 31218 ChimerSeq STARFusion TCGA_RNA-Seq ITPR1-SETMAR ITPR1 chr3 4695570 + SETMAR chr3 4354582 + Exonic hg19 KIRC TCGA-BP-5195-01A 2 18 In-Frame Intra-chr p26.1 p26.1 Seq+ 31219 ChimerSeq STARFusion TCGA_RNA-Seq PTPRU-NOS1AP PTPRU chr1 29618538 + NOS1AP chr1 162124195 + Exonic hg19 KIRC TCGA-B0-4698-01A 3 3 Out-of-frame Intra-chr p35.3 q23.3 Seq+ 31220 ChimerSeq STARFusion TCGA_RNA-Seq PSME2-RENBP PSME2 chr14 24612832 - RENBP chrX 153206982 - Exonic hg19 KIRC TCGA-BP-4167-01A 3 0 Out-of-frame Inter-chr q12 q28 31221 ChimerSeq STARFusion TCGA_RNA-Seq NNMT-RBM7 NNMT chr11 114168880 + RBM7 chr11 114272420 + Exonic hg19 KIRC TCGA-CZ-5461-01A 3 8 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 31222 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 KIRC TCGA-CZ-5461-01A 2 2 CDS-5'UTR Intra-chr p12 p12 Transcription factor 31223 ChimerSeq STARFusion TCGA_RNA-Seq UBE4A-IFT46 UBE4A chr11 118243381 + IFT46 chr11 118430579 - Exonic hg19 KIRC TCGA-CZ-5461-01A 2 0 CDS-5'UTR Intra-chr q23.3 q23.3 31224 ChimerSeq STARFusion TCGA_RNA-Seq RNF216-EIF2AK1 RNF216 chr7 5756347 - EIF2AK1 chr7 6064432 - Exonic hg19 KIRC TCGA-DV-5576-01A 21 132 In-Frame Intra-chr p22.1 p22.1 Seq+ 31225 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0319L-GOLGA1 KIAA0319L chr1 35972213 - GOLGA1 chr9 127652757 - Exonic hg19 KIRC TCGA-DV-5576-01A 16 56 In-Frame Inter-chr p34.3 q33.3 Seq+ 31226 ChimerSeq STARFusion TCGA_RNA-Seq GOLGA1-WDR38 GOLGA1 chr9 127660828 - WDR38 chr9 127616484 + Exonic hg19 KIRC TCGA-DV-5576-01A 4 11 In-Frame Intra-chr q33.3 q33.3 Seq+ 31227 ChimerSeq STARFusion TCGA_RNA-Seq NDRG1-ST3GAL1 NDRG1 chr8 134292478 - ST3GAL1 chr8 134511435 - Exonic hg19 KIRC TCGA-BP-4160-01A 3 15 Out-of-frame Intra-chr q24.22 Tumor suppressor gene q24.22 Seq+ 31228 ChimerSeq STARFusion TCGA_RNA-Seq NUDCD1-ABHD6 NUDCD1 chr8 110283234 - ABHD6 chr3 58270812 + Exonic hg19 KIRC TCGA-BP-4759-01A 2 1 In-Frame Inter-chr q23.1 p14.3 31229 ChimerSeq STARFusion TCGA_RNA-Seq GNG7-ZNF787 GNG7 chr19 2646222 - ZNF787 chr19 56614596 - Exonic hg19 KIRC TCGA-BP-4759-01A 2 0 5'UTR-5'UTR Intra-chr p13.3 q13.43 Transcription factor 31230 ChimerSeq STARFusion TCGA_RNA-Seq NLGN1-LIFR NLGN1 chr3 173525622 + LIFR chr5 38530768 - Exonic hg19 KIRC TCGA-B4-5843-01A 2 0 CDS-5'UTR Inter-chr q26.31 p13.1 Oncogene Tumor suppressor gene 31231 ChimerSeq STARFusion TCGA_RNA-Seq CSE1L-ARFGEF2 CSE1L chr20 47675085 + ARFGEF2 chr20 47648586 + Exonic hg19 KIRC TCGA-DV-5565-01A 6 14 Out-of-frame Intra-chr q13.13 q13.13 Seq+ 31232 ChimerSeq STARFusion TCGA_RNA-Seq CSE1L-ARFGEF2 CSE1L chr20 47675085 + ARFGEF2 chr20 47649560 + Exonic hg19 KIRC TCGA-DV-5565-01A 2 14 Out-of-frame Intra-chr q13.13 q13.13 Seq+ 31233 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-EP300 TNRC6B chr22 40552186 + EP300 chr22 41572251 + Exonic hg19 KIRC TCGA-B0-5692-01A 3 18 Out-of-frame Intra-chr q13.1 q13.2 Oncogene Seq+ 31234 ChimerSeq STARFusion TCGA_RNA-Seq IKZF5-APBB2 IKZF5 chr10 124768210 - APBB2 chr4 41016415 - Exonic hg19 KIRC TCGA-B0-5097-01A 2 0 5'UTR-CDS Inter-chr q26.13 Transcription factor p13 31235 ChimerSeq STARFusion TCGA_RNA-Seq SFPQ-TFE3 SFPQ chr1 35654604 - TFE3 chrX 48898095 - Exonic hg19 KIRC TCGA-BP-4758-01A 5 8 In-Frame Inter-chr p34.3 p11.23 Oncogene Transcription factor KB Pub Seq+ 31236 ChimerSeq STARFusion TCGA_RNA-Seq TNIP1-ANXA6 TNIP1 chr5 150422457 - ANXA6 chr5 150503928 - Exonic hg19 KIRC TCGA-A3-3352-01A 2 5 In-Frame Intra-chr q33.1 q33.1 Seq+ 31237 ChimerSeq STARFusion TCGA_RNA-Seq LOC728024-CXorf56 LOC728024 chr8 37605009 - CXorf56 chrX 118676528 - Exonic hg19 KIRC TCGA-A3-3352-01A 3 0 Out-of-frame Inter-chr q24 31238 ChimerSeq STARFusion TCGA_RNA-Seq CPPED1-SMC6 CPPED1 chr16 12875042 - SMC6 chr2 17927218 - Exonic hg19 KIRC TCGA-CJ-4868-01A 2 1 CDS-5'UTR Inter-chr p13.12 p24.2 31239 ChimerSeq STARFusion TCGA_RNA-Seq JAG2-SLC44A4 JAG2 chr14 105624043 - SLC44A4 chr6_qbl_hap6 3125316 - Exonic hg19 KIRC TCGA-CJ-4868-01A 2 1 CDS-3'UTR Inter-chr q32.33 31240 ChimerSeq STARFusion TCGA_RNA-Seq SFPQ-SMAD1 SFPQ chr1 35652602 - SMAD1 chr4 146460956 + Exonic hg19 KIRC TCGA-CJ-4868-01A 2 0 Out-of-frame Inter-chr p34.3 q31.21 Transcription factor 31241 ChimerSeq STARFusion TCGA_RNA-Seq XPO5-SCAP XPO5 chr6 43501644 - SCAP chr3 47464026 - Exonic hg19 KIRC TCGA-CJ-4868-01A 2 0 In-Frame Inter-chr p21.1 Tumor suppressor gene p21.31 31242 ChimerSeq STARFusion TCGA_RNA-Seq MYO1F-WRN MYO1F chr19 8616624 - WRN chr8 30942682 + Exonic hg19 KIRC TCGA-B8-5163-01A 2 0 In-Frame Inter-chr p13.2 p12 Oncogene 31243 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPK-KCTD3 HNRNPK chr9 86584278 - KCTD3 chr1 215794303 + Exonic hg19 KIRC TCGA-CZ-5463-01A 3 1 Out-of-frame Inter-chr q21.32 q41 31244 ChimerSeq STARFusion TCGA_RNA-Seq TTLL3-TGFB1 TTLL3 chr3 9859443 + TGFB1 chr19 41854360 - Exonic hg19 KIRC TCGA-A3-3306-01A 2 0 In-Frame Inter-chr p25.3 q13.2 Tumor suppressor gene 31245 ChimerSeq STARFusion TCGA_RNA-Seq DLGAP4-TMEM189 DLGAP4 chr20 35091002 + TMEM189 chr20 48747484 - Exonic hg19 KIRC TCGA-CW-6087-01A 4 9 In-Frame Intra-chr q11.23 q13.13 Seq+ 31246 ChimerSeq STARFusion TCGA_RNA-Seq SMAD3-DLGAP4 SMAD3 chr15 67358698 + DLGAP4 chr20 35125108 + Exonic hg19 KIRC TCGA-CW-6087-01A 3 9 Out-of-frame Inter-chr q22.33 Transcription factor q11.23 Seq+ 31247 ChimerSeq STARFusion TCGA_RNA-Seq DLGAP4-TMEM189 DLGAP4 chr20 35089913 + TMEM189 chr20 48747484 - Exonic hg19 KIRC TCGA-CW-6087-01A 2 9 5'UTR-CDS Intra-chr q11.23 q13.13 Seq+ 31248 ChimerSeq STARFusion TCGA_RNA-Seq NCOA6-NRG4 NCOA6 chr20 33413275 - NRG4 chr15 76303627 - Exonic hg19 KIRC TCGA-CW-6087-01A 2 2 5'UTR-5'UTR Inter-chr q11.22 q24.2 31249 ChimerSeq STARFusion TCGA_RNA-Seq MAP1B-C3orf67 MAP1B chr5 71411626 + C3orf67 chr3 58739590 - Exonic hg19 KIRC TCGA-BP-4961-01A 2 10 Out-of-frame Inter-chr q13.2 p14.2 Seq+ 31250 ChimerSeq STARFusion TCGA_RNA-Seq SPARC-ELK3 SPARC chr5 151042567 - ELK3 chr12 96640958 + Exonic hg19 KIRC TCGA-BP-4961-01A 3 1 Out-of-frame Inter-chr q33.1 Tumor suppressor gene q23.1 Transcription factor 31251 ChimerSeq STARFusion TCGA_RNA-Seq ARSG-PRCP ARSG chr17 66397591 + PRCP chr11 82571159 - Exonic hg19 KIRC TCGA-B0-4712-01A 2 0 Out-of-frame Inter-chr q24.2 q14.1 31252 ChimerSeq STARFusion TCGA_RNA-Seq WIPI1-BCAS3 WIPI1 chr17 66446869 - BCAS3 chr17 59024580 + Exonic hg19 KIRC TCGA-B0-4712-01A 2 0 Out-of-frame Intra-chr q24.2 q23.2 31253 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-PACS1 KDM2A chr11 66888829 + PACS1 chr11 66010383 + Exonic hg19 KIRC TCGA-B0-5713-01A 2 13 Out-of-frame Intra-chr q13.2 Transcription factor q13.1 Seq+ 31254 ChimerSeq STARFusion TCGA_RNA-Seq LRIG1-SLC26A7 LRIG1 chr3 66444464 - SLC26A7 chr8 92261767 + Exonic hg19 KIRC TCGA-B0-5713-01A 2 9 CDS-5'UTR Inter-chr Tumor suppressor gene q21.3 Seq+ 31255 ChimerSeq STARFusion TCGA_RNA-Seq TMEM181-DYNLT1 TMEM181 chr6 159010814 + DYNLT1 chr6 159062392 - Exonic hg19 KIRC TCGA-B0-4837-01A 2 0 In-Frame Intra-chr q25.3 q25.3 31256 ChimerSeq STARFusion TCGA_RNA-Seq NUPL2-TUBGCP6 NUPL2 chr7 23226765 + TUBGCP6 chr22 50658444 - Exonic hg19 KIRC TCGA-CJ-4895-01A 2 0 In-Frame Inter-chr p15.3 q13.33 31257 ChimerSeq STARFusion TCGA_RNA-Seq LMAN2-SPOCK1 LMAN2 chr5 176761285 - SPOCK1 chr5 136448250 - Exonic hg19 KIRC TCGA-BP-4986-01A 7 11 Out-of-frame Intra-chr q35.3 q31.2 Seq+ 31258 ChimerSeq STARFusion TCGA_RNA-Seq TNIP1-NIPAL4 TNIP1 chr5 150441688 - NIPAL4 chr5 156890102 + Exonic hg19 KIRC TCGA-BP-4986-01A 4 6 Out-of-frame Intra-chr q33.1 q33.3 Seq+ 31259 ChimerSeq STARFusion TCGA_RNA-Seq PRDM6-NIPAL4 PRDM6 chr5 122495332 + NIPAL4 chr5 156890102 + Exonic hg19 KIRC TCGA-BP-4986-01A 3 8 In-Frame Intra-chr q23.2 Transcription factor q33.3 Seq+ 31260 ChimerSeq STARFusion TCGA_RNA-Seq SQSTM1-PDLIM7 SQSTM1 chr5 179251323 + PDLIM7 chr5 176923524 - Exonic hg19 KIRC TCGA-BP-4986-01A 2 7 CDS-5'UTR Intra-chr q35.3 q35.3 Seq+ 31261 ChimerSeq STARFusion TCGA_RNA-Seq TNFSF10-NCEH1 TNFSF10 chr3 172232651 - NCEH1 chr3 172365904 - Exonic hg19 KIRC TCGA-CJ-4637-01A 4 3 In-Frame Intra-chr q26.31 q26.31 Seq+ 31262 ChimerSeq STARFusion TCGA_RNA-Seq MRPS35-C12orf70 MRPS35 chr12 27877119 + C12orf70 chr12 27627719 + Exonic hg19 KIRC TCGA-CJ-4893-01A 2 6 In-Frame Intra-chr p11.22 31263 ChimerSeq STARFusion TCGA_RNA-Seq ZNF277-CEACAM19 ZNF277 chr7 111846862 + CEACAM19 chr19 45175868 + Exonic hg19 KIRC TCGA-B0-5081-01A 11 47 In-Frame Inter-chr q31.1 Transcription factor q13.31 Seq+ 31264 ChimerSeq STARFusion TCGA_RNA-Seq ZEB2-ARHGAP15 ZEB2 chr2 145274845 - ARHGAP15 chr2 144460988 + Exonic hg19 KIRC TCGA-B0-5081-01A 2 0 In-Frame Intra-chr q22.3 Transcription factor q22.2 31265 ChimerSeq STARFusion TCGA_RNA-Seq PRKAB2-FBP2 PRKAB2 chr1 146643568 - FBP2 chr9 97349751 - Exonic hg19 KIRC TCGA-CZ-5452-01A 3 15 Out-of-frame Inter-chr q21.1 q22.32 Seq+ 31266 ChimerSeq STARFusion TCGA_RNA-Seq PDZRN3-ADAM19 PDZRN3 chr3 73651505 - ADAM19 chr5 156997988 - Exonic hg19 KIRC TCGA-B8-A7U6-01A 2 5 Out-of-frame Inter-chr p13 q33.3 Seq+ 31267 ChimerSeq STARFusion TCGA_RNA-Seq ZC3HAV1L-FAM120B ZC3HAV1L chr7 138711454 - FAM120B chr6 170704575 + Exonic hg19 KIRC TCGA-B0-4839-01A 2 0 In-Frame Inter-chr q34 31268 ChimerSeq STARFusion TCGA_RNA-Seq LRRC41-FAM159A LRRC41 chr1 46763235 - FAM159A chr1 53108535 + Exonic hg19 KIRC TCGA-CZ-4863-01A 67 223 Out-of-frame Intra-chr p33 p32.3 Seq+ 31269 ChimerSeq STARFusion TCGA_RNA-Seq LRRC41-FAM159A LRRC41 chr1 46763235 - FAM159A chr1 53105647 + Exonic hg19 KIRC TCGA-CZ-4863-01A 8 223 Out-of-frame Intra-chr p33 p32.3 Seq+ 31270 ChimerSeq STARFusion TCGA_RNA-Seq SUGT1-NOL6 SUGT1 chr13 53237247 + NOL6 chr9 33472410 - Exonic hg19 KIRC TCGA-CZ-4863-01A 2 1 In-Frame Inter-chr q14.3 p13.3 31271 ChimerSeq STARFusion TCGA_RNA-Seq STAMBP-AQP4 STAMBP chr2 74058186 + AQP4 chr18 24442560 - Exonic hg19 KIRC TCGA-CZ-4854-01A 2 1 In-Frame Inter-chr p13.1 q11.2 Seq+ 31272 ChimerSeq STARFusion TCGA_RNA-Seq GIGYF2-STAU2 GIGYF2 chr2 233621044 + STAU2 chr8 74601048 - Exonic hg19 KIRC TCGA-CZ-4854-01A 2 0 Out-of-frame Inter-chr q37.1 q21.11 31273 ChimerSeq STARFusion TCGA_RNA-Seq BCAR3-SH2D3C BCAR3 chr1 94057822 - SH2D3C chr9 130511944 - Exonic hg19 KIRC TCGA-CJ-4870-01A 2 2 In-Frame Inter-chr p22.1 q34.11 31274 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R2B-ZNF300P1 PPP2R2B chr5 146257565 - ZNF300P1 chr5 150323434 - Exonic hg19 KIRC TCGA-BP-4345-01A 2 0 CDS-3'UTR Intra-chr q32 q33.1 31275 ChimerSeq STARFusion TCGA_RNA-Seq ERGIC1-ENO1 ERGIC1 chr5 172336764 + ENO1 chr1 8928116 - Exonic hg19 KIRC TCGA-A3-3322-01A 2 2 Out-of-frame Inter-chr q35.1 p36.23 31276 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-UBE2D2 SNHG3 chr1 28834672 + UBE2D2 chr5 138979957 + Exonic hg19 KIRC TCGA-A3-3322-01A 2 0 5'UTR-5'UTR Inter-chr p35.3 q31.2 31277 ChimerSeq STARFusion TCGA_RNA-Seq LOC100506710-ZCCHC7 LOC100506710 chr9 37080533 + ZCCHC7 chr9 37349354 + Exonic hg19 KIRC TCGA-B2-5641-01A 8 8 5'UTR-CDS Intra-chr p13.2 31278 ChimerSeq STARFusion TCGA_RNA-Seq PAPLN-PSEN1 PAPLN chr14 73704300 + PSEN1 chr14 73673094 + Exonic hg19 KIRC TCGA-B2-5641-01A 5 7 5'UTR-CDS Intra-chr q24.2 q24.2 31279 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF10L-ACTL8 ARHGEF10L chr1 17930086 + ACTL8 chr1 18149480 + Exonic hg19 KIRC TCGA-B2-5641-01A 3 2 CDS-5'UTR Intra-chr p36.13 p36.13 31280 ChimerSeq STARFusion TCGA_RNA-Seq C3-APBB1 C3 chr19 6720527 - APBB1 chr11 6422918 - Exonic hg19 KIRC TCGA-B2-5641-01A 2 0 In-Frame Inter-chr p13.3 p15.4 31281 ChimerSeq STARFusion TCGA_RNA-Seq NOL9-TRNAU1AP NOL9 chr1 6601890 - TRNAU1AP chr1 28904012 + Exonic hg19 KIRC TCGA-B0-5119-01A 18 53 In-Frame Intra-chr p36.31 p35.3 Seq+ 31282 ChimerSeq STARFusion TCGA_RNA-Seq NOL9-TRNAU1AP NOL9 chr1 6609631 - TRNAU1AP chr1 28904012 + Exonic hg19 KIRC TCGA-B0-5119-01A 5 53 Out-of-frame Intra-chr p36.31 p35.3 Seq+ 31283 ChimerSeq STARFusion TCGA_RNA-Seq TRNAU1AP-NOL9 TRNAU1AP chr1 28898412 + NOL9 chr1 6593501 - Exonic hg19 KIRC TCGA-B0-5119-01A 3 1 In-Frame Intra-chr p35.3 p36.31 31284 ChimerSeq STARFusion TCGA_RNA-Seq SPEN-SMAD6 SPEN chr1 16174645 + SMAD6 chr15 67004006 + Exonic hg19 KIRC TCGA-B0-5119-01A 2 0 Out-of-frame Inter-chr p36.21 Transcription factor q22.31 31285 ChimerSeq STARFusion TCGA_RNA-Seq GLIS3-RCL1 GLIS3 chr9 4286038 - RCL1 chr9 4823548 + Exonic hg19 KIRC TCGA-BP-4983-01A 62 294 In-Frame Intra-chr p24.2 Transcription factor p24.1 Seq+ 31286 ChimerSeq STARFusion TCGA_RNA-Seq GLIS3-RCL1 GLIS3 chr9 4299421 - RCL1 chr9 4823548 + Exonic hg19 KIRC TCGA-BP-4983-01A 35 294 5'UTR-CDS Intra-chr p24.2 Transcription factor p24.1 Seq+ 31287 ChimerSeq STARFusion TCGA_RNA-Seq DLG4-MARCH10 DLG4 chr17 7120437 - 2019_ 3_ 10_ chr17 60879113 - Exonic hg19 KIRC TCGA-BP-4983-01A 25 119 Out-of-frame Intra-chr p13.1 Tumor suppressor gene q23.2 Seq+ 31288 ChimerSeq STARFusion TCGA_RNA-Seq DLG4-MARCH10 DLG4 chr17 7120437 - 2019_ 3_ 10_ chr17 60865960 - Exonic hg19 KIRC TCGA-BP-4983-01A 14 119 Out-of-frame Intra-chr p13.1 Tumor suppressor gene q23.2 Seq+ 31289 ChimerSeq STARFusion TCGA_RNA-Seq KANK1-TPD52L3 KANK1 chr9 540667 + TPD52L3 chr9 6330182 + Exonic hg19 KIRC TCGA-BP-4983-01A 23 70 5'UTR-CDS Intra-chr p24.3 Tumor suppressor gene p24.1 Seq+ 31290 ChimerSeq STARFusion TCGA_RNA-Seq DOCK8-JAK2 DOCK8 chr9 340321 + JAK2 chr9 5050686 + Exonic hg19 KIRC TCGA-BP-4983-01A 16 73 Out-of-frame Intra-chr p24.3 p24.1 TK:JakA Oncogene Seq+ 31291 ChimerSeq STARFusion TCGA_RNA-Seq MGAT5B-VMP1 MGAT5B chr17 74878380 + VMP1 chr17 57842332 + Exonic hg19 KIRC TCGA-BP-4983-01A 14 58 Out-of-frame Intra-chr q25.2 q23.1 Seq+ 31292 ChimerSeq STARFusion TCGA_RNA-Seq UBE2Z-TRIM37 UBE2Z chr17 46993549 + TRIM37 chr17 57089807 - Exonic hg19 KIRC TCGA-BP-4983-01A 12 47 Out-of-frame Intra-chr q21.32 q22 Seq+ 31293 ChimerSeq STARFusion TCGA_RNA-Seq MGAT5B-VMP1 MGAT5B chr17 74869045 + VMP1 chr17 57842332 + Exonic hg19 KIRC TCGA-BP-4983-01A 2 58 Out-of-frame Intra-chr q25.2 q23.1 Seq+ 31294 ChimerSeq STARFusion TCGA_RNA-Seq ENDOV-TMEM104 ENDOV chr17 78397432 + TMEM104 chr17 72832066 + Exonic hg19 KIRC TCGA-BP-4983-01A 12 14 Out-of-frame Intra-chr q25.3 q25.1 Seq+ 31295 ChimerSeq STARFusion TCGA_RNA-Seq PITPNM3-STX8 PITPNM3 chr17 6406847 - STX8 chr17 9281970 - Exonic hg19 KIRC TCGA-BP-4983-01A 8 30 In-Frame Intra-chr p13.1 p13.1 Seq+ 31296 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57725762 + VMP1 chr17 57917129 + Exonic hg19 KIRC TCGA-BP-4983-01A 3 41 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 31297 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57733388 + VMP1 chr17 57915656 + Exonic hg19 KIRC TCGA-BP-4983-01A 3 41 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 31298 ChimerSeq STARFusion TCGA_RNA-Seq KANK1-UHRF2 KANK1 chr9 540667 + UHRF2 chr9 6420912 + Exonic hg19 KIRC TCGA-BP-4983-01A 6 14 5'UTR-5'UTR Intra-chr p24.3 Tumor suppressor gene p24.1 Tumor suppressor gene Seq+ 31299 ChimerSeq STARFusion TCGA_RNA-Seq SKAP1-DNAH17 SKAP1 chr17 46423267 - DNAH17 chr17 76481115 - Exonic hg19 KIRC TCGA-BP-4983-01A 4 4 In-Frame Intra-chr q21.32 q25.3 Seq+ 31300 ChimerSeq STARFusion TCGA_RNA-Seq KAT7-NPLOC4 KAT7 chr17 47895373 + NPLOC4 chr17 79589304 - Exonic hg19 KIRC TCGA-BP-4983-01A 2 11 In-Frame Intra-chr q21.33 Transcription factor q25.3 Seq+ 31301 ChimerSeq STARFusion TCGA_RNA-Seq STX8-PIK3R5 STX8 chr17 9395146 - PIK3R5 chr17 8796972 - Exonic hg19 KIRC TCGA-BP-4983-01A 3 4 In-Frame Intra-chr p13.1 p13.1 31302 ChimerSeq STARFusion TCGA_RNA-Seq SPATA6L-GLIS3 SPATA6L chr9 4661899 - GLIS3 chr9 3937189 - Exonic hg19 KIRC TCGA-BP-4983-01A 2 5 In-Frame Intra-chr p24.1 p24.2 Transcription factor Seq+ 31303 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 KIRC TCGA-BP-4983-01A 2 0 CDS-5'UTR Intra-chr p12 p12 Transcription factor 31304 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-IGHA2 DHRSX chrX 2184826 - IGHA2 chr14 106054730 - Exonic hg19 KIRP TCGA-HE-7128 63 1 Out-of-frame Inter-chr p22.33 31305 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-IGHA2 DHRSX chrY 2134826 - IGHA2 chr14 106054730 - Exonic hg19 KIRP TCGA-HE-7128 21 1 Out-of-frame Inter-chr p22.33 31306 ChimerSeq STARFusion TCGA_RNA-Seq HCG4P5-SPP1 HCG4P5 chr6 29910366 - SPP1 chr4 88896869 + Exonic hg19 KIRP TCGA-EV-5901 5 11 Out-of-frame Inter-chr q22.1 31307 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469662 + FTH1P27 chrX 37364954 + Exonic hg19 KIRP TCGA-B1-7332 8 0 Out-of-frame Inter-chr q13.33 p21.1 31308 ChimerSeq STARFusion TCGA_RNA-Seq ZNF318-COL21A1 ZNF318 chr6 43316062 - COL21A1 chr6 55990947 - Exonic hg19 KIRP TCGA-UZ-A9PQ 12 55 In-Frame Intra-chr p21.1 Transcription factor p12.1 Seq+ 31309 ChimerSeq STARFusion TCGA_RNA-Seq ELOVL5-PFKFB3 ELOVL5 chr6 53213615 - PFKFB3 chr10 6255586 + Exonic hg19 KIRP TCGA-UZ-A9PQ 4 28 5'UTR-CDS Inter-chr p12.1 p15.1 Seq+ 31310 ChimerSeq STARFusion TCGA_RNA-Seq DAPK1-WSCD1 DAPK1 chr9 90273042 + WSCD1 chr17 5792077 + Exonic hg19 KIRP TCGA-UZ-A9PQ 9 4 CDS-5'UTR Inter-chr q21.33 CAMK:DAPK Tumor suppressor gene p13.2 Seq+ 31311 ChimerSeq STARFusion TCGA_RNA-Seq CD2AP-TRERF1 CD2AP chr6 47522502 + TRERF1 chr6 42268487 - Exonic hg19 KIRP TCGA-UZ-A9PQ 2 11 CDS-5'UTR Intra-chr p12.3 p21.1 Transcription factor Seq+ 31312 ChimerSeq STARFusion TCGA_RNA-Seq POLH-PKHD1 POLH chr6 43568828 + PKHD1 chr6 51656171 - Exonic hg19 KIRP TCGA-UZ-A9PQ 2 10 Out-of-frame Intra-chr p21.1 p12.2 Oncogene Seq+ 31313 ChimerSeq STARFusion TCGA_RNA-Seq AGMO-IGKC AGMO chr7 15397934 - IGKC chr2 89160114 - Exonic hg19 KIRP TCGA-F9-A4JJ 33 9 Out-of-frame Inter-chr p21.2 p11.2 31314 ChimerSeq STARFusion TCGA_RNA-Seq CLASRP-ZNF524 CLASRP chr19 45556435 + ZNF524 chr19 56113441 + Exonic hg19 KIRP TCGA-F9-A4JJ 6 17 CDS-5'UTR Intra-chr q13.32 q13.42 Transcription factor Seq+ 31315 ChimerSeq STARFusion TCGA_RNA-Seq MET-C8orf34 MET chr7 116412043 + C8orf34 chr8 69358564 + Exonic hg19 KIRP TCGA-GL-7773 46 104 In-Frame Inter-chr q31.2 TK:Met Oncogene q13.2 Seq+ 31316 ChimerSeq STARFusion TCGA_RNA-Seq C8orf34-MET C8orf34 chr8 69351881 + MET chr7 116414935 + Exonic hg19 KIRP TCGA-GL-7773 25 93 In-Frame Inter-chr q13.2 q31.2 TK:Met Oncogene Seq+ 31317 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 KIRP TCGA-A4-A5XZ 8 0 Out-of-frame Inter-chr q13.33 p21.1 31318 ChimerSeq STARFusion TCGA_RNA-Seq SNX25-LINC01060 SNX25 chr4 186188309 + LINC01060 chr4 189357858 + Exonic hg19 KIRP TCGA-G7-A8LC 3 8 Out-of-frame Intra-chr q35.1 q35.2 31319 ChimerSeq STARFusion TCGA_RNA-Seq KMT2C-CTBP2P1 KMT2C chr7 151970790 - CTBP2P1 chrY 59001440 + Exonic hg19 KIRP TCGA-P4-A5E8 3 10 Out-of-frame Inter-chr q36.1 Oncogene Tumor suppressor gene 31320 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-RHOT1 TANC2 chr17 61345234 + RHOT1 chr17 30580104 + Exonic hg19 KIRP TCGA-2Z-A9JI 95 207 CDS-3'UTR Intra-chr q23.2 q11.2 Seq+ 31321 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SERPINE2 IGH@ chr14 106994219 - SERPINE2 chr2 224862918 - Exonic hg19 KIRP TCGA-2Z-A9JI 15 3 Out-of-frame Inter-chr 32.33 q36.1 31322 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K3-BRIP1 MAP3K3 chr17 61744420 + BRIP1 chr17 59763526 - Exonic hg19 KIRP TCGA-2Z-A9JI 11 10 In-Frame Intra-chr q23.3 STE:STE11 q23.2 Oncogene Seq+ 31323 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 KIRP TCGA-2Z-A9JK 6 2 In-Frame Intra-chr p13.3 p13.3 31324 ChimerSeq STARFusion TCGA_RNA-Seq EML4-ALK EML4 chr2 42472827 + ALK chr2 29446394 - Exonic hg19 KIRP TCGA-2Z-A9JJ 9 37 In-Frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 31325 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-MMP23A INTS1 chr7 1523378 - MMP23A chr1 1631900 + Exonic hg19 KIRP TCGA-2Z-A9JJ 14 0 CDS-5'UTR Inter-chr p22.3 p36.33 Seq+ 31326 ChimerSeq STARFusion TCGA_RNA-Seq MTMR12-CARD6 MTMR12 chr5 32312864 - CARD6 chr5 40841576 + Exonic hg19 KIRP TCGA-2Z-A9JJ 6 12 In-Frame Intra-chr p13.3 p13.1 Seq+ 31327 ChimerSeq STARFusion TCGA_RNA-Seq C1QTNF3-CLPTM1L C1QTNF3 chr5 34028859 - CLPTM1L chr5 1318568 - Exonic hg19 KIRP TCGA-2Z-A9JJ 5 14 Out-of-frame Intra-chr p13.2 p15.33 Seq+ 31328 ChimerSeq STARFusion TCGA_RNA-Seq U2AF2-TFE3 U2AF2 chr19 56180988 + TFE3 chrX 48898095 - Exonic hg19 KIRP TCGA-2Z-A9JO 13 15 Out-of-frame Inter-chr q13.42 p11.23 Oncogene Transcription factor Seq+ 31329 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 KIRP TCGA-B1-5398 21 0 Out-of-frame Inter-chr q13.33 p21.1 31330 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1 FTL chr19 49469663 + FTH1 chr11 61732363 - Exonic hg19 KIRP TCGA-B1-5398 2 27 In-Frame Inter-chr q13.33 q12.3 31331 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGHA2 TET3 chr2 74329257 + IGHA2 chr14 106054733 - Exonic hg19 KIRP TCGA-DZ-6135 17 4 Out-of-frame Inter-chr p13.1 Transcription factor 31332 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHA2 GAS6 chr13 114525072 - IGHA2 chr14 106054734 - Exonic hg19 KIRP TCGA-DZ-6135 12 0 Out-of-frame Inter-chr q34 Oncogene 31333 ChimerSeq STARFusion TCGA_RNA-Seq VIM-IGKC VIM chr10 17270481 + IGKC chr2 89160769 - Exonic hg19 KIRP TCGA-DZ-6135 5 8 Out-of-frame Inter-chr p13 Tumor suppressor gene p11.2 31334 ChimerSeq STARFusion TCGA_RNA-Seq ZNF791-HOOK2 ZNF791 chr19 12721896 + HOOK2 chr19 12874592 - Exonic hg19 KIRP TCGA-HE-7130 15 101 In-Frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 31335 ChimerSeq STARFusion TCGA_RNA-Seq ZNF791-HOOK2 ZNF791 chr19 12721896 + HOOK2 chr19 12874413 - Exonic hg19 KIRP TCGA-HE-7130 3 100 In-Frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 31336 ChimerSeq STARFusion TCGA_RNA-Seq PTPN21-TTC8 PTPN21 chr14 89016582 - TTC8 chr14 89305796 + Exonic hg19 KIRP TCGA-HE-7130 9 24 In-Frame Intra-chr q31.3 q31.3 Seq+ 31337 ChimerSeq STARFusion TCGA_RNA-Seq CPT1A-TRIM24 CPT1A chr11 68574935 - TRIM24 chr7 138235808 + Exonic hg19 KIRP TCGA-HE-7130 3 31 In-Frame Inter-chr q13.3 q33 Oncogene Tumor suppressor gene Seq+ 31338 ChimerSeq STARFusion TCGA_RNA-Seq GRIPAP1-SYP GRIPAP1 chrX 48834717 - SYP chrX 49045735 - Exonic hg19 KIRP TCGA-HE-7130 5 7 CDS-3'UTR Intra-chr p11.23 p11.23 Seq+ 31339 ChimerSeq STARFusion TCGA_RNA-Seq ITGB4-ENDOV ITGB4 chr17 73729773 + ENDOV chr17 78403573 + Exonic hg19 KIRP TCGA-HE-7130 3 10 Out-of-frame Intra-chr q25.1 q25.3 Seq+ 31340 ChimerSeq STARFusion TCGA_RNA-Seq RICTOR-NUP155 RICTOR chr5 39074213 - NUP155 chr5 37299670 - Exonic hg19 KIRP TCGA-HE-7130 2 4 Out-of-frame Intra-chr p13.1 p13.2 Seq+ 31341 ChimerSeq STARFusion TCGA_RNA-Seq PXN-PLA2G1B PXN chr12 120703420 - PLA2G1B chr12 120760120 - Exonic hg19 KIRP TCGA-SX-A7SM 5 19 In-Frame Intra-chr q24.23 q24.31 Seq+ 31342 ChimerSeq STARFusion TCGA_RNA-Seq SLC12A7-NFKBIZ SLC12A7 chr5 1064224 - NFKBIZ chr3 101579614 + Exonic hg19 KIRP TCGA-2Z-A9J3 1747 5744 Out-of-frame Inter-chr p15.33 q12.3 31343 ChimerSeq STARFusion TCGA_RNA-Seq NMT1-HIGD1B NMT1 chr17 43138828 + HIGD1B chr17 42925470 + Exonic hg19 KIRP TCGA-2Z-A9J3 8 72 CDS-5'UTR Intra-chr q21.31 q21.31 Seq+ 31344 ChimerSeq STARFusion TCGA_RNA-Seq NMT1-HIGD1B NMT1 chr17 43138828 + HIGD1B chr17 42925428 + Exonic hg19 KIRP TCGA-2Z-A9J3 7 71 CDS-5'UTR Intra-chr q21.31 q21.31 Seq+ 31345 ChimerSeq STARFusion TCGA_RNA-Seq NMT1-HIGD1B NMT1 chr17 43138828 + HIGD1B chr17 42926622 + Exonic hg19 KIRP TCGA-2Z-A9J3 5 71 Out-of-frame Intra-chr q21.31 q21.31 Seq+ 31346 ChimerSeq STARFusion TCGA_RNA-Seq PPARA-SAMM50 PPARA chr22 46572733 + SAMM50 chr22 44384991 + Exonic hg19 KIRP TCGA-P4-A5EB 38 573 5'UTR-CDS Intra-chr q13.31 Tumor suppressor gene Transcription factor q13.31 Seq+ 31347 ChimerSeq STARFusion TCGA_RNA-Seq PPARA-SAMM50 PPARA chr22 46547873 + SAMM50 chr22 44384991 + Exonic hg19 KIRP TCGA-P4-A5EB 26 552 5'UTR-CDS Intra-chr q13.31 Tumor suppressor gene Transcription factor q13.31 Seq+ 31348 ChimerSeq STARFusion TCGA_RNA-Seq PPARA-SAMM50 PPARA chr22 46567391 + SAMM50 chr22 44384991 + Exonic hg19 KIRP TCGA-P4-A5EB 6 552 5'UTR-CDS Intra-chr q13.31 Tumor suppressor gene Transcription factor q13.31 Seq+ 31349 ChimerSeq STARFusion TCGA_RNA-Seq SDHA-MIF SDHA chr5 236714 + MIF chr22 24236959 + Exonic hg19 KIRP TCGA-P4-A5EB 73 198 Out-of-frame Inter-chr p15.33 Oncogene Tumor suppressor gene q11.23 Tumor suppressor gene Seq+ 31350 ChimerSeq STARFusion TCGA_RNA-Seq PICK1-PDCD6 PICK1 chr22 38470974 + PDCD6 chr5 311408 + Exonic hg19 KIRP TCGA-P4-A5EB 25 66 Out-of-frame Inter-chr q13.1 p15.33 Seq+ 31351 ChimerSeq STARFusion TCGA_RNA-Seq BCL2L13-GTPBP1 BCL2L13 chr22 18121652 + GTPBP1 chr22 39126617 + Exonic hg19 KIRP TCGA-P4-A5EB 9 75 5'UTR-CDS Intra-chr q11.21 q13.1 Seq+ 31352 ChimerSeq STARFusion TCGA_RNA-Seq KLHL22-RANGAP1 KLHL22 chr22 20800730 - RANGAP1 chr22 41652828 - Exonic hg19 KIRP TCGA-P4-A5EB 9 42 In-Frame Intra-chr q11.21 q13.2 Seq+ 31353 ChimerSeq STARFusion TCGA_RNA-Seq PLXNB2-MAST4 PLXNB2 chr22 50722031 - MAST4 chr5 66195779 + Exonic hg19 KIRP TCGA-P4-A5EB 10 30 Out-of-frame Inter-chr q13.33 q12.3 AGC:MAST Seq+ 31354 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1671-NLN KIAA1671 chr22 25348739 + NLN chr5 65105342 + Exonic hg19 KIRP TCGA-P4-A5EB 8 9 5'UTR-CDS Inter-chr q11.23 q12.3 Seq+ 31355 ChimerSeq STARFusion TCGA_RNA-Seq ZFR-RAI14 ZFR chr5 32444335 - RAI14 chr5 34796044 + Exonic hg19 KIRP TCGA-P4-A5EB 4 25 In-Frame Intra-chr p13.3 p13.2 Seq+ 31356 ChimerSeq STARFusion TCGA_RNA-Seq FLJ27365-DENND6B FLJ27365 chr22 46449800 + DENND6B chr22 50751537 - Exonic hg19 KIRP TCGA-P4-A5EB 3 27 Out-of-frame Intra-chr q13.33 31357 ChimerSeq STARFusion TCGA_RNA-Seq CLPTM1L-SCUBE1 CLPTM1L chr5 1322992 - SCUBE1 chr22 43651583 - Exonic hg19 KIRP TCGA-P4-A5EB 3 26 Out-of-frame Inter-chr p15.33 q13.2 Seq+ 31358 ChimerSeq STARFusion TCGA_RNA-Seq ADSL-CDH18 ADSL chr22 40757346 + CDH18 chr5 19981287 - Exonic hg19 KIRP TCGA-P4-A5EB 4 18 CDS-5'UTR Inter-chr q13.1 p14.3 Seq+ 31359 ChimerSeq STARFusion TCGA_RNA-Seq MARCH6-MTRR 2019_ 3_ 6_ chr5 10394897 + MTRR chr5 7883268 + Exonic hg19 KIRP TCGA-P4-A5EB 2 18 Out-of-frame Intra-chr p15.2 p15.31 Oncogene Seq+ 31360 ChimerSeq STARFusion TCGA_RNA-Seq GUSBP11-SHANK3 GUSBP11 chr22 24059218 - SHANK3 chr22 51137118 + Exonic hg19 KIRP TCGA-P4-A5EB 3 9 3'UTR-CDS Intra-chr q11.23 Seq+ 31361 ChimerSeq STARFusion TCGA_RNA-Seq RNF185-EIF4ENIF1 RNF185 chr22 31556289 + EIF4ENIF1 chr22 31867903 - Exonic hg19 KIRP TCGA-P4-A5EB 2 13 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 31362 ChimerSeq STARFusion TCGA_RNA-Seq PDE4D-RNF180 PDE4D chr5 59064073 - RNF180 chr5 63665442 + Exonic hg19 KIRP TCGA-P4-A5EB 2 12 Out-of-frame Intra-chr q12.1 q12.3 Tumor suppressor gene Seq+ 31363 ChimerSeq STARFusion TCGA_RNA-Seq ITGA2-MYO18B ITGA2 chr5 52353931 + MYO18B chr22 26388329 + Exonic hg19 KIRP TCGA-P4-A5EB 2 9 In-Frame Inter-chr q11.2 q12.1 Tumor suppressor gene Seq+ 31364 ChimerSeq STARFusion TCGA_RNA-Seq FAM134B-TERT FAM134B chr5 16508687 - TERT chr5 1282739 - Exonic hg19 KIRP TCGA-UZ-A9PN 7 53 Out-of-frame Intra-chr p15.33 Oncogene Seq+ 31365 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-RAB11FIP3 ANKRD11 chr16 89371614 - RAB11FIP3 chr16 538851 + Exonic hg19 KIRP TCGA-IA-A40X 8 33 Out-of-frame Intra-chr q24.3 Seq+ 31366 ChimerSeq STARFusion TCGA_RNA-Seq ACSM2B-NOTCH2 ACSM2B chr16 20586744 - NOTCH2 chr1 120465401 - Exonic hg19 KIRP TCGA-IA-A40X 5 23 5'UTR-CDS Inter-chr p12.3 p12 Oncogene Tumor suppressor gene Seq+ 31367 ChimerSeq STARFusion TCGA_RNA-Seq CAST-ACSM2B CAST chr5 96011305 + ACSM2B chr16 20576175 - Exonic hg19 KIRP TCGA-IA-A40X 2 5 5'UTR-5'UTR Inter-chr q15 p12.3 31368 ChimerSeq STARFusion TCGA_RNA-Seq SLC22A5-RAD50 SLC22A5 chr5 131722843 + RAD50 chr5 131976364 + Exonic hg19 KIRP TCGA-BQ-5876 10 23 In-Frame Intra-chr q31.1 q31.1 Oncogene Seq+ 31369 ChimerSeq STARFusion TCGA_RNA-Seq DPP4-PDK1 DPP4 chr2 162902042 - PDK1 chr2 173451006 + Exonic hg19 KIRP TCGA-Q2-A5QZ 25 93 In-Frame Intra-chr q24.2 Tumor suppressor gene q31.1 AGC:PDK1 Seq+ 31370 ChimerSeq STARFusion TCGA_RNA-Seq GLTSCR1L-PMS1 GLTSCR1L chr6 42749839 + PMS1 chr2 190728469 + Exonic hg19 KIRP TCGA-Q2-A5QZ 5 18 Out-of-frame Inter-chr q32.2 Oncogene Seq+ 31371 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A12-ERICH2 SLC25A12 chr2 172864586 - ERICH2 chr2 171654551 + Exonic hg19 KIRP TCGA-Q2-A5QZ 2 13 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 31372 ChimerSeq STARFusion TCGA_RNA-Seq STAT1-GAPDHP59 STAT1 chr2 191872289 - GAPDHP59 chr2 188280271 + Exonic hg19 KIRP TCGA-BQ-5878 8 32 Out-of-frame Intra-chr q32.2 Tumor suppressor gene Transcription factor q32.1 31373 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-JAK1 CTSC chr11 88027212 - JAK1 chr1 65325893 - Exonic hg19 KIRP TCGA-BQ-5878 13 1 Out-of-frame Inter-chr q14.2 p31.3 TK:JakA Oncogene 31374 ChimerSeq STARFusion TCGA_RNA-Seq HCG4P5-SPP1 HCG4P5 chr6 29910367 - SPP1 chr4 88896868 + Exonic hg19 KIRP TCGA-BQ-5878 4 22 Out-of-frame Inter-chr q22.1 31375 ChimerSeq STARFusion TCGA_RNA-Seq RAB3GAP1-LRP1B RAB3GAP1 chr2 135851263 + LRP1B chr2 141739845 - Exonic hg19 KIRP TCGA-BQ-5878 5 8 Out-of-frame Intra-chr q21.3 q22.2 Oncogene Tumor suppressor gene Seq+ 31376 ChimerSeq STARFusion TCGA_RNA-Seq RBMS1-AOX3P RBMS1 chr2 161135059 - AOX3P chr2 201587701 + Exonic hg19 KIRP TCGA-BQ-5878 3 14 Out-of-frame Intra-chr q24.2 q33.1 Seq+ 31377 ChimerSeq STARFusion TCGA_RNA-Seq RAB3GAP1-LRP1B RAB3GAP1 chr2 135851263 + LRP1B chr2 141709509 - Exonic hg19 KIRP TCGA-BQ-5878 2 8 Out-of-frame Intra-chr q21.3 q22.2 Oncogene Tumor suppressor gene Seq+ 31378 ChimerSeq STARFusion TCGA_RNA-Seq EFTUD2-GFAP EFTUD2 chr17 42953302 - GFAP chr17 42991456 - Exonic hg19 KIRP TCGA-GL-A9DE 3 20 In-Frame Intra-chr q21.31 q21.31 Seq+ 31379 ChimerSeq STARFusion TCGA_RNA-Seq DNMT3B-MMP9 DNMT3B chr20 31350505 + MMP9 chr20 44638505 + Exonic hg19 KIRP TCGA-Y8-A8S1 3 9 5'UTR-CDS Intra-chr q11.21 Tumor suppressor gene q13.12 Seq+ 31380 ChimerSeq STARFusion TCGA_RNA-Seq PDXDC1-NOMO1 PDXDC1 chr16 15123913 + NOMO1 chr16 14932264 + Exonic hg19 KIRP TCGA-SX-A7SP 3 5 Out-of-frame Intra-chr p13.11 31381 ChimerSeq STARFusion TCGA_RNA-Seq SLC47A2-ALDH3A1 SLC47A2 chr17 19616016 - ALDH3A1 chr17 19645525 - Exonic hg19 KIRP TCGA-GL-A4EM 12 44 In-Frame Intra-chr p11.2 p11.2 Seq+ 31382 ChimerSeq STARFusion TCGA_RNA-Seq YARS-LINC00879 YARS chr1 33272083 - LINC00879 chr3 94807002 + Exonic hg19 KIRP TCGA-Y8-A8RZ 2 8 Out-of-frame Inter-chr p35.1 q11.2 31383 ChimerSeq STARFusion TCGA_RNA-Seq EIF5-NOTCH2 EIF5 chr14 103800934 + NOTCH2 chr1 120465069 - Exonic hg19 KIRP TCGA-MH-A855 4 13 5'UTR-CDS Inter-chr q32.32 p12 Oncogene Tumor suppressor gene Seq+ 31384 ChimerSeq STARFusion TCGA_RNA-Seq HCG4P5-SPP1 HCG4P5 chr6 29894258 - SPP1 chr4 88896881 + Exonic hg19 KIRP TCGA-A4-A5Y1 4 36 Out-of-frame Inter-chr q22.1 31385 ChimerSeq STARFusion TCGA_RNA-Seq HCG4P5-SPP1 HCG4P5 chr6 29910366 - SPP1 chr4 88896869 + Exonic hg19 KIRP TCGA-A4-A5Y1 3 24 Out-of-frame Inter-chr q22.1 31386 ChimerSeq STARFusion TCGA_RNA-Seq BACE2-FAM3B BACE2 chr21 42540502 + FAM3B chr21 42710305 + Exonic hg19 KIRP TCGA-A4-A5Y1 4 15 Out-of-frame Intra-chr q22.2 q22.3 Seq+ 31387 ChimerSeq STARFusion TCGA_RNA-Seq GLTP-COX6A1 GLTP chr12 110318077 - COX6A1 chr12 120876182 + Exonic hg19 KIRP TCGA-A4-A5Y1 3 14 In-Frame Intra-chr q24.11 q24.31 31388 ChimerSeq STARFusion TCGA_RNA-Seq UBE2E3-CDC42EP3 UBE2E3 chr2 181848820 + CDC42EP3 chr2 37873965 - Exonic hg19 KIRP TCGA-A4-A5Y0 14 40 CDS-5'UTR Intra-chr q31.3 p22.2 Seq+ 31389 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 KIRP TCGA-A4-A5Y0 22 0 Out-of-frame Inter-chr q13.33 p21.1 31390 ChimerSeq STARFusion TCGA_RNA-Seq INPP1-HECW2 INPP1 chr2 191225032 + HECW2 chr2 197298182 - Exonic hg19 KIRP TCGA-A4-A5Y0 15 19 CDS-5'UTR Intra-chr q32.2 q32.3 Seq+ 31391 ChimerSeq STARFusion TCGA_RNA-Seq RASAL1-DDX54 RASAL1 chr12 113552605 - DDX54 chr12 113603837 - Exonic hg19 KIRP TCGA-A4-A5Y0 5 6 Out-of-frame Intra-chr q24.13 Tumor suppressor gene q24.13 Seq+ 31392 ChimerSeq STARFusion TCGA_RNA-Seq IL15RA-LRPAP1 IL15RA chr10 6019389 - LRPAP1 chr4 3534060 - Exonic hg19 KIRP TCGA-GL-A59R 29 0 Out-of-frame Inter-chr p15.1 p16.3 31393 ChimerSeq STARFusion TCGA_RNA-Seq ABI1-LRRC37A6P ABI1 chr10 27112067 - LRRC37A6P chr10 27546879 - Exonic hg19 KIRP TCGA-O9-A75Z 2 7 CDS-5'UTR Intra-chr p12.1 p12.1 Seq+ 31394 ChimerSeq STARFusion TCGA_RNA-Seq GPX3-IGHGP GPX3 chr5 150400491 + IGHGP chr14 106136184 - Exonic hg19 KIRP TCGA-AL-7173 4 2 Out-of-frame Inter-chr q33.1 Tumor suppressor gene 31395 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-CSMD2 NFAT5 chr16 69600277 + CSMD2 chr1 34015950 - Exonic hg19 KIRP TCGA-SX-A71S 19 71 In-Frame Inter-chr q22.1 Transcription factor p35.1 Seq+ 31396 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-CSMD2 NFAT5 chr16 69602451 + CSMD2 chr1 34015950 - Exonic hg19 KIRP TCGA-SX-A71S 13 71 In-Frame Inter-chr q22.1 Transcription factor p35.1 Seq+ 31397 ChimerSeq STARFusion TCGA_RNA-Seq ZNF277-IMMP2L ZNF277 chr7 111958328 + IMMP2L chr7 110303777 - Exonic hg19 KIRP TCGA-B9-4116 94 480 Out-of-frame Intra-chr q31.1 Transcription factor q31.1 Seq+ 31398 ChimerSeq STARFusion TCGA_RNA-Seq AKAP9-ZNF3 AKAP9 chr7 91570461 + ZNF3 chr7 99675056 - Exonic hg19 KIRP TCGA-B9-4116 19 110 CDS-5'UTR Intra-chr q21.2 Oncogene q22.1 Transcription factor Seq+ 31399 ChimerSeq STARFusion TCGA_RNA-Seq AKAP9-ZNF3 AKAP9 chr7 91570461 + ZNF3 chr7 99677279 - Exonic hg19 KIRP TCGA-B9-4116 11 110 CDS-5'UTR Intra-chr q21.2 Oncogene q22.1 Transcription factor Seq+ 31400 ChimerSeq STARFusion TCGA_RNA-Seq AKAP9-ZNF3 AKAP9 chr7 91570461 + ZNF3 chr7 99673253 - Exonic hg19 KIRP TCGA-B9-4116 7 110 Out-of-frame Intra-chr q21.2 Oncogene q22.1 Transcription factor Seq+ 31401 ChimerSeq STARFusion TCGA_RNA-Seq ZC3HC1-ADAM22 ZC3HC1 chr7 129691061 - ADAM22 chr7 87704941 + Exonic hg19 KIRP TCGA-B9-4116 3 27 In-Frame Intra-chr q32.2 q21.12 Seq+ 31402 ChimerSeq STARFusion TCGA_RNA-Seq ZC3HC1-ADAM22 ZC3HC1 chr7 129688814 - ADAM22 chr7 87704941 + Exonic hg19 KIRP TCGA-B9-4116 2 27 Out-of-frame Intra-chr q32.2 q21.12 Seq+ 31403 ChimerSeq STARFusion TCGA_RNA-Seq DOCK4-BCAP29 DOCK4 chr7 111846157 - BCAP29 chr7 107224327 + Exonic hg19 KIRP TCGA-B9-4116 3 12 Out-of-frame Intra-chr q31.1 Seq+ 31404 ChimerSeq STARFusion TCGA_RNA-Seq DYNC1I1-ZC3HAV1 DYNC1I1 chr7 95457428 + ZC3HAV1 chr7 138774505 - Exonic hg19 KIRP TCGA-B9-4116 2 7 In-Frame Intra-chr q21.3 q34 Seq+ 31405 ChimerSeq STARFusion TCGA_RNA-Seq TNKS-RHOT1 TNKS chr8 9538310 + RHOT1 chr17 30580104 + Exonic hg19 KIRP TCGA-B9-4117 31 180 CDS-3'UTR Inter-chr p23.1 q11.2 Seq+ 31406 ChimerSeq STARFusion TCGA_RNA-Seq GPI-POLG GPI chr19 34884673 + POLG chr15 89876583 - Exonic hg19 KIRP TCGA-B9-4115 25 0 Out-of-frame Inter-chr q26.1 31407 ChimerSeq STARFusion TCGA_RNA-Seq ESYT2-VIPR2 ESYT2 chr7 158580695 - VIPR2 chr7 158851269 - Exonic hg19 KIRP TCGA-GL-8500 75 195 In-Frame Intra-chr q36.3 q36.3 Seq+ 31408 ChimerSeq STARFusion TCGA_RNA-Seq HNF1B-NOTCH1 HNF1B chr17 36099431 - NOTCH1 chr9 139396940 - Exonic hg19 KIRP TCGA-BQ-7053 367 1303 In-Frame Inter-chr q12 Transcription factor q34.3 Oncogene Tumor suppressor gene Seq+ 31409 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH1-HNF1B NOTCH1 chr9 139397634 - HNF1B chr17 36093736 - Exonic hg19 KIRP TCGA-BQ-7053 80 350 In-Frame Inter-chr q34.3 Oncogene Tumor suppressor gene q12 Transcription factor Seq+ 31410 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH1-HNF1B NOTCH1 chr9 139397634 - HNF1B chr17 36093814 - Exonic hg19 KIRP TCGA-BQ-7053 39 349 In-Frame Inter-chr q34.3 Oncogene Tumor suppressor gene q12 Transcription factor Seq+ 31411 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN4-TALDO1 TSPAN4 chr11 847300 + TALDO1 chr11 755879 + Exonic hg19 KIRP TCGA-G7-A8LD 64 172 5'UTR-CDS Intra-chr p15.5 p15.5 Seq+ 31412 ChimerSeq STARFusion TCGA_RNA-Seq LRBA-CHCHD3 LRBA chr4 151199005 - CHCHD3 chr7 132481338 - Exonic hg19 KIRP TCGA-G7-A8LD 37 87 In-Frame Inter-chr q31.3 q33 Transcription factor Seq+ 31413 ChimerSeq STARFusion TCGA_RNA-Seq CTPS1-ASB3 CTPS1 chr1 41474562 + ASB3 chr2 53897827 - Exonic hg19 KIRP TCGA-G7-A8LD 29 111 In-Frame Inter-chr p34.2 p16.2 Seq+ 31414 ChimerSeq STARFusion TCGA_RNA-Seq OAZ2-SPAST OAZ2 chr15 64995228 - SPAST chr2 32366973 + Exonic hg19 KIRP TCGA-G7-A8LD 14 36 In-Frame Inter-chr q22.31 p22.3 Seq+ 31415 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-PIP5K1P1 KCTD20 chr6 36457999 + PIP5K1P1 chr6 7987766 + Exonic hg19 KIRP TCGA-G7-A8LD 19 0 Out-of-frame Intra-chr p21.31 p24.3 31416 ChimerSeq STARFusion TCGA_RNA-Seq RBMS1-CCDC148 RBMS1 chr2 161223727 - CCDC148 chr2 159170406 - Exonic hg19 KIRP TCGA-A4-7585 20 37 In-Frame Intra-chr q24.2 q24.1 Seq+ 31417 ChimerSeq STARFusion TCGA_RNA-Seq CUL9-KIF6 CUL9 chr6 43156453 + KIF6 chr6 39311591 - Exonic hg19 KIRP TCGA-B9-A69E 219 922 In-Frame Intra-chr p21.1 p21.2 Seq+ 31418 ChimerSeq STARFusion TCGA_RNA-Seq C3-GPR108 C3 chr19 6702138 - GPR108 chr19 6733995 - Exonic hg19 KIRP TCGA-B9-A69E 13 54 Out-of-frame Intra-chr p13.3 p13.3 31419 ChimerSeq STARFusion TCGA_RNA-Seq ABCA7-COL5A3 ABCA7 chr19 1059084 + COL5A3 chr19 10114821 - Exonic hg19 KIRP TCGA-B9-A44B 4 80 In-Frame Intra-chr p13.3 p13.2 Seq+ 31420 ChimerSeq STARFusion TCGA_RNA-Seq SNRPA-ANKRD24 SNRPA chr19 41257386 + ANKRD24 chr19 4199680 + Exonic hg19 KIRP TCGA-B9-A44B 3 25 Out-of-frame Intra-chr q13.2 p13.3 Seq+ 31421 ChimerSeq STARFusion TCGA_RNA-Seq SNRPA-ANKRD24 SNRPA chr19 41257386 + ANKRD24 chr19 4199872 + Exonic hg19 KIRP TCGA-B9-A44B 2 25 Out-of-frame Intra-chr q13.2 p13.3 Seq+ 31422 ChimerSeq STARFusion TCGA_RNA-Seq C7orf50-CD177 C7orf50 chr7 1166893 - CD177 chr19 43858005 + Exonic hg19 KIRP TCGA-B9-A44B 3 17 Out-of-frame Inter-chr p22.3 q13.31 Seq+ 31423 ChimerSeq STARFusion TCGA_RNA-Seq ALDOB-TCF25 ALDOB chr9 104187124 - TCF25 chr16 89976316 + Exonic hg19 KIRP TCGA-BQ-5891 10 1 Out-of-frame Inter-chr q31.1 q24.3 31424 ChimerSeq STARFusion TCGA_RNA-Seq SLC47A1-RN7SL2 SLC47A1 chr17 19481601 + RN7SL2 chr14 50329497 - Exonic hg19 KIRP TCGA-BQ-5892 4 38 Out-of-frame Inter-chr p11.2 q21.3 31425 ChimerSeq STARFusion TCGA_RNA-Seq ZNF106-GPR115 ZNF106 chr15 42713259 - GPR115 chr6 47688945 + Exonic hg19 KIRP TCGA-F9-A7Q0 53 100 Out-of-frame Inter-chr q15.1 31426 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D16-ZNF106 TBC1D16 chr17 78009594 - ZNF106 chr15 42716258 - Exonic hg19 KIRP TCGA-F9-A7Q0 4 43 Out-of-frame Inter-chr q25.3 q15.1 Seq+ 31427 ChimerSeq STARFusion TCGA_RNA-Seq FANCC-PSIP1 FANCC chr9 97912205 - PSIP1 chr9 15490122 - Exonic hg19 KIRP TCGA-SX-A71V 4 15 In-Frame Intra-chr q22.32 Oncogene p22.3 Oncogene Seq+ 31428 ChimerSeq STARFusion TCGA_RNA-Seq LTBR-PRSS3 LTBR chr12 6495610 + PRSS3 chr9 33796641 + Exonic hg19 KIRP TCGA-P4-AAVM 83 365 In-Frame Inter-chr p13.31 p13.3 Seq+ 31429 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 KIRP TCGA-IZ-A6M9 11 5 In-Frame Intra-chr p13.3 p13.3 31430 ChimerSeq STARFusion TCGA_RNA-Seq MTND4P12-MTATP8P1 MTND4P12 chr5 134263511 - MTATP8P1 chr1 569017 + Exonic hg19 KIRP TCGA-P4-AAVK 3 6 Out-of-frame Inter-chr q31.1 p36.33 31431 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 KIRP TCGA-A4-7287 1352 3330 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 31432 ChimerSeq STARFusion TCGA_RNA-Seq ACAT2-IGHG1 ACAT2 chr6 160183155 + IGHG1 chr14 106209411 - Exonic hg19 KIRP TCGA-A4-7287 6 1 Out-of-frame Inter-chr q25.3 q32.33 31433 ChimerSeq STARFusion TCGA_RNA-Seq SPTLC3-ISM1 SPTLC3 chr20 13140779 + ISM1 chr20 13251151 + Exonic hg19 KIRP TCGA-A4-7288 2 8 In-Frame Intra-chr p12.1 p12.1 31434 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010683 - TTC18 chr10 75016175 - Exonic hg19 KIRP TCGA-IA-A83W 17 97 Out-of-frame Intra-chr q22.2 31435 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010596 - TTC18 chr10 75016174 - Exonic hg19 KIRP TCGA-IA-A83W 10 96 3'UTR-CDS Intra-chr q22.2 31436 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010573 - TTC18 chr10 75016174 - Exonic hg19 KIRP TCGA-IA-A83W 8 96 3'UTR-CDS Intra-chr q22.2 31437 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75011521 - TTC18 chr10 75016174 - Exonic hg19 KIRP TCGA-IA-A83W 2 96 Out-of-frame Intra-chr q22.2 31438 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 KIRP TCGA-IA-A83V 7 0 Out-of-frame Inter-chr q13.33 p21.1 31439 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 KIRP TCGA-IA-A83S 8 0 Out-of-frame Inter-chr q13.33 p21.1 31440 ChimerSeq STARFusion TCGA_RNA-Seq RICTOR-MINPP1 RICTOR chr5 38991051 - MINPP1 chr10 89311839 + Exonic hg19 KIRP TCGA-DW-7841 4 8 In-Frame Inter-chr p13.1 q23.2 Seq+ 31441 ChimerSeq STARFusion TCGA_RNA-Seq CTSD-IGH@ CTSD chr11 1774615 - IGH@ chr14 106207720 - Exonic hg19 KIRP TCGA-4A-A93Y 3 35 Out-of-frame Inter-chr p15.5 32.33 31442 ChimerSeq STARFusion TCGA_RNA-Seq CTSD-IGHG1 CTSD chr11 1774615 - IGHG1 chr14 106207720 - Exonic hg19 KIRP TCGA-4A-A93Y 3 22 Out-of-frame Inter-chr p15.5 q32.33 31443 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG3 GAS6 chr13 114525073 - IGHG3 chr14 106237746 - Exonic hg19 KIRP TCGA-4A-A93Y 8 1 Out-of-frame Inter-chr q34 Oncogene 31444 ChimerSeq STARFusion TCGA_RNA-Seq ZNF420-SULT2B1 ZNF420 chr19 37498984 + SULT2B1 chr19 49079198 + Exonic hg19 KIRP TCGA-4A-A93Y 2 16 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.33 Seq+ 31445 ChimerSeq STARFusion TCGA_RNA-Seq SUPT7L-RBKS SUPT7L chr2 27885046 - RBKS chr2 28004655 - Exonic hg19 KIRP TCGA-BQ-5889 3 19 Out-of-frame Intra-chr p23.3 p23.2 Seq+ 31446 ChimerSeq STARFusion TCGA_RNA-Seq TFE3-PRCC TFE3 chrX 48896632 - PRCC chr1 156752074 + Exonic hg19 KIRP TCGA-BQ-5882 50 172 In-Frame Inter-chr p11.23 Oncogene Transcription factor q23.1 KB Seq+ 31447 ChimerSeq STARFusion TCGA_RNA-Seq PRCC-TFE3 PRCC chr1 156738031 + TFE3 chrX 48895967 - Exonic hg19 KIRP TCGA-BQ-5882 50 142 In-Frame Inter-chr q23.1 p11.23 Oncogene Transcription factor KB Pub Seq+ 31448 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-IGKC VPS13B chr8 100844852 + IGKC chr2 89160770 - Exonic hg19 KIRP TCGA-P4-A5EA 19 0 Out-of-frame Inter-chr q22.2 p11.2 31449 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-IGKJ3 VPS13B chr8 100844852 + IGKJ3 chr2 89160770 - Exonic hg19 KIRP TCGA-P4-A5EA 19 0 Out-of-frame Inter-chr q22.2 p11.2 31450 ChimerSeq STARFusion TCGA_RNA-Seq ATMIN-IGF2 ATMIN chr16 81069598 + IGF2 chr11 2150764 - Exonic hg19 KIRP TCGA-J7-A8I2 20 0 Out-of-frame Inter-chr q23.2 Tumor suppressor gene Transcription factor p15.5 Oncogene 31451 ChimerSeq STARFusion TCGA_RNA-Seq MSI2-IGKC MSI2 chr17 55343613 + IGKC chr2 89161430 - Exonic hg19 KIRP TCGA-BQ-5884 9 1 Out-of-frame Inter-chr q22 p11.2 31452 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3B-BCHE FNDC3B chr3 171851336 + BCHE chr3 165504099 - Exonic hg19 KIRP TCGA-G7-6793 97 307 Out-of-frame Intra-chr q26.31 q26.1 Seq+ 31453 ChimerSeq STARFusion TCGA_RNA-Seq RPN1-MAP6D1 RPN1 chr3 128363762 - MAP6D1 chr3 183535899 - Exonic hg19 KIRP TCGA-G7-6793 18 119 In-Frame Intra-chr q21.3 q27.1 Seq+ 31454 ChimerSeq STARFusion TCGA_RNA-Seq KLHL24-ATP11B KLHL24 chr3 183390272 + ATP11B chr3 182631649 + Exonic hg19 KIRP TCGA-G7-6793 23 82 In-Frame Intra-chr q27.1 q26.33 Oncogene Seq+ 31455 ChimerSeq STARFusion TCGA_RNA-Seq SEMA5B-PLS1 SEMA5B chr3 122667353 - PLS1 chr3 142422710 + Exonic hg19 KIRP TCGA-G7-6793 19 56 Out-of-frame Intra-chr q21.1 q23 Seq+ 31456 ChimerSeq STARFusion TCGA_RNA-Seq CAPZA2-MET CAPZA2 chr7 116528244 + MET chr7 116395409 + Exonic hg19 KIRP TCGA-G7-6793 11 80 Out-of-frame Intra-chr q31.2 q31.2 TK:Met Oncogene KB Pub Seq+ 31457 ChimerSeq STARFusion TCGA_RNA-Seq RPN1-MAP6D1 RPN1 chr3 128363378 - MAP6D1 chr3 183535899 - Exonic hg19 KIRP TCGA-G7-6793 3 112 Out-of-frame Intra-chr q21.3 q27.1 Seq+ 31458 ChimerSeq STARFusion TCGA_RNA-Seq PIK3CB-SEMA5B PIK3CB chr3 138452203 - SEMA5B chr3 122667556 - Exonic hg19 KIRP TCGA-G7-6793 10 45 Out-of-frame Intra-chr q22.3 Oncogene q21.1 Seq+ 31459 ChimerSeq STARFusion TCGA_RNA-Seq RAB7A-PARP15 RAB7A chr3 128445202 + PARP15 chr3 122324783 + Exonic hg19 KIRP TCGA-G7-6793 11 4 5'UTR-CDS Intra-chr q21.3 Tumor suppressor gene q21.1 Seq+ 31460 ChimerSeq STARFusion TCGA_RNA-Seq RNF213-SLC26A11 RNF213 chr17 78332279 + SLC26A11 chr17 78221929 + Exonic hg19 KIRP TCGA-G7-6793 3 25 Out-of-frame Intra-chr q25.3 Oncogene q25.3 Pub Seq+ 31461 ChimerSeq STARFusion TCGA_RNA-Seq PTPRA-VPS16 PTPRA chr20 2903931 + VPS16 chr20 2840365 + Exonic hg19 KIRP TCGA-G7-6793 6 8 5'UTR-CDS Intra-chr p13 p13 Seq+ 31462 ChimerSeq STARFusion TCGA_RNA-Seq TMEM117-MCCC1 TMEM117 chr12 44693522 + MCCC1 chr3 182740342 - Exonic hg19 KIRP TCGA-G7-6793 2 22 In-Frame Inter-chr q12 q27.1 Seq+ 31463 ChimerSeq STARFusion TCGA_RNA-Seq PLS1-PIK3CB PLS1 chr3 142315351 + PIK3CB chr3 138456728 - Exonic hg19 KIRP TCGA-G7-6793 3 16 5'UTR-CDS Intra-chr q23 q22.3 Oncogene Seq+ 31464 ChimerSeq STARFusion TCGA_RNA-Seq PITPNA-SLC43A2 PITPNA chr17 1442163 - SLC43A2 chr17 1520063 - Exonic hg19 KIRP TCGA-G7-6793 4 11 Out-of-frame Intra-chr p13.3 Seq+ 31465 ChimerSeq STARFusion TCGA_RNA-Seq CDV3-KLHL24 CDV3 chr3 133293959 + KLHL24 chr3 183390084 + Exonic hg19 KIRP TCGA-G7-6793 3 13 Out-of-frame Intra-chr q22.1 q27.1 Seq+ 31466 ChimerSeq STARFusion TCGA_RNA-Seq TPRA1-LINC00879 TPRA1 chr3 127298583 - LINC00879 chr3 94699214 + Exonic hg19 KIRP TCGA-G7-6793 3 12 Out-of-frame Intra-chr q21.3 q11.2 31467 ChimerSeq STARFusion TCGA_RNA-Seq SH3RF1-NEK1 SH3RF1 chr4 170037420 - NEK1 chr4 170327898 - Exonic hg19 KIRP TCGA-G7-6793 3 8 In-Frame Intra-chr q33 q33 Other:NEK Seq+ 31468 ChimerSeq STARFusion TCGA_RNA-Seq TTC7B-RPS6KA5 TTC7B chr14 91161844 - RPS6KA5 chr14 91372643 - Exonic hg19 KIRP TCGA-G7-6793 2 7 Out-of-frame Intra-chr q32.11 q32.11 Seq+ 31469 ChimerSeq STARFusion TCGA_RNA-Seq STRN-ALK STRN chr2 37143221 - ALK chr2 29446394 - Exonic hg19 KIRP TCGA-G7-6792 47 81 In-Frame Intra-chr p22.2 p23.1 TK:ALK Oncogene KB Pub Seq+ 31470 ChimerSeq STARFusion TCGA_RNA-Seq KIDINS220-MYT1L KIDINS220 chr2 8977610 - MYT1L chr2 2288275 - Exonic hg19 KIRP TCGA-G7-6792 12 71 5'UTR-5'UTR Intra-chr p25.1 p25.3 Transcription factor Seq+ 31471 ChimerSeq STARFusion TCGA_RNA-Seq KDM3A-CRIM1 KDM3A chr2 86691339 + CRIM1 chr2 36691677 + Exonic hg19 KIRP TCGA-G7-6792 12 53 In-Frame Intra-chr p11.2 Tumor suppressor gene p22.2 Seq+ 31472 ChimerSeq STARFusion TCGA_RNA-Seq CRIM1-HAAO CRIM1 chr2 36726490 + HAAO chr2 42997722 - Exonic hg19 KIRP TCGA-G7-6792 9 31 Out-of-frame Intra-chr p22.2 p21 Seq+ 31473 ChimerSeq STARFusion TCGA_RNA-Seq CLU-TESC CLU chr8 27455977 - TESC chr12 117536326 - Exonic hg19 KIRP TCGA-G7-6792 8 1 3'UTR-3'UTR Inter-chr p21.1 Tumor suppressor gene q24.22 31474 ChimerSeq STARFusion TCGA_RNA-Seq DPY30-IMMT DPY30 chr2 32108455 - IMMT chr2 86389202 - Exonic hg19 KIRP TCGA-G7-6792 4 17 3'UTR-CDS Intra-chr p22.3 p11.2 Seq+ 31475 ChimerSeq STARFusion TCGA_RNA-Seq MEMO1-IMMT MEMO1 chr2 32108455 - IMMT chr2 86389202 - Exonic hg19 KIRP TCGA-G7-6792 4 17 In-Frame Intra-chr p22.3 p11.2 Seq+ 31476 ChimerSeq STARFusion TCGA_RNA-Seq ROCK2-NCOA1 ROCK2 chr2 11484122 - NCOA1 chr2 24866835 + Exonic hg19 KIRP TCGA-G7-6792 3 16 CDS-5'UTR Intra-chr p25.1 AGC:DMPK p23.3 Oncogene Transcription factor Seq+ 31477 ChimerSeq STARFusion TCGA_RNA-Seq MAP4K3-SMC6 MAP4K3 chr2 39664033 - SMC6 chr2 17927218 - Exonic hg19 KIRP TCGA-G7-6792 2 8 CDS-5'UTR Intra-chr p22.1 p24.2 Seq+ 31478 ChimerSeq STARFusion TCGA_RNA-Seq CLU-TESC CLU chr8 27455977 - TESC chr12 117536326 - Exonic hg19 KIRP TCGA-DW-7839 11 1 3'UTR-3'UTR Inter-chr p21.1 Tumor suppressor gene q24.22 31479 ChimerSeq STARFusion TCGA_RNA-Seq TMSB10-HAP1 TMSB10 chr2 85133236 + HAP1 chr17 39877732 - Exonic hg19 KIRP TCGA-B1-A656 3 6 Out-of-frame Inter-chr p11.2 q21.2 31480 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1 FTL chr19 49469173 + FTH1 chr11 61732584 - Exonic hg19 KIRP TCGA-B1-A656 2 9 In-Frame Inter-chr q13.33 q12.3 31481 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 KIRP TCGA-Y8-A898 6 0 Out-of-frame Inter-chr q13.33 p21.1 31482 ChimerSeq STARFusion TCGA_RNA-Seq PET112-LINC00467 PET112 chr4 152609782 - LINC00467 chr1 211599553 + Exonic hg19 KIRP TCGA-SX-A7SS 4 19 CDS-5'UTR Inter-chr q32.3 31483 ChimerSeq STARFusion TCGA_RNA-Seq ALB-EXOSC9 ALB chr4 74270123 + EXOSC9 chr4 122737927 + Exonic hg19 KIRP TCGA-SX-A7SS 2 4 Out-of-frame Intra-chr q13.3 q27 Seq+ 31484 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 KIRP TCGA-BQ-7062 4 7 In-Frame Intra-chr p13.3 p13.3 31485 ChimerSeq STARFusion TCGA_RNA-Seq SFPQ-TFE3 SFPQ chr1 35654604 - TFE3 chrX 48898095 - Exonic hg19 KIRP TCGA-SX-A7SO 48 172 In-Frame Inter-chr p34.3 p11.23 Oncogene Transcription factor KB Pub Seq+ 31486 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-JAK1 CTSC chr11 88027212 - JAK1 chr1 65325893 - Exonic hg19 KIRP TCGA-DW-7838 6 1 Out-of-frame Inter-chr q14.2 p31.3 TK:JakA Oncogene 31487 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-JAK1 CTSC chr11 88027212 - JAK1 chr1 65325893 - Exonic hg19 KIRP TCGA-DW-7834 12 1 Out-of-frame Inter-chr q14.2 p31.3 TK:JakA Oncogene 31488 ChimerSeq STARFusion TCGA_RNA-Seq MTATP6P1-MTND4P12 MTATP6P1 chr1 569306 + MTND4P12 chr5 134263375 - Exonic hg19 KIRP TCGA-DW-7834 3 5 Out-of-frame Inter-chr p36.33 q31.1 31489 ChimerSeq STARFusion TCGA_RNA-Seq PRCC-TFE3 PRCC chr1 156738031 + TFE3 chrX 48895967 - Exonic hg19 KIRP TCGA-BQ-7050 42 78 In-Frame Inter-chr q23.1 p11.23 Oncogene Transcription factor KB Pub Seq+ 31490 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2-ACSM2B NOTCH2 chr1 120465259 - ACSM2B chr16 20576175 - Exonic hg19 KIRP TCGA-BQ-7056 20 169 CDS-5'UTR Inter-chr p12 Oncogene Tumor suppressor gene p12.3 Seq+ 31491 ChimerSeq STARFusion TCGA_RNA-Seq ACSM2B-NOTCH2 ACSM2B chr16 20587529 - NOTCH2 chr1 120465069 - Exonic hg19 KIRP TCGA-BQ-7056 6 53 5'UTR-CDS Inter-chr p12.3 p12 Oncogene Tumor suppressor gene Seq+ 31492 ChimerSeq STARFusion TCGA_RNA-Seq ACSM2B-NOTCH2 ACSM2B chr16 20586744 - NOTCH2 chr1 120465069 - Exonic hg19 KIRP TCGA-BQ-7056 5 45 5'UTR-CDS Inter-chr p12.3 p12 Oncogene Tumor suppressor gene Seq+ 31493 ChimerSeq STARFusion TCGA_RNA-Seq SAMM50-TXNRD2 SAMM50 chr22 44351478 + TXNRD2 chr22 19918618 - Exonic hg19 KIRP TCGA-BQ-7056 5 13 Out-of-frame Intra-chr q13.31 q11.21 Seq+ 31494 ChimerSeq STARFusion TCGA_RNA-Seq COASY-IGHA1 COASY chr17 40714610 + IGHA1 chr14 106175002 - Exonic hg19 KIRP TCGA-5P-A9KA 5 1 Out-of-frame Inter-chr q21.2 31495 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN4-IGL@ TSPAN4 chr11 866720 + IGL@ chr22 23247169 + Exonic hg19 KIRP TCGA-5P-A9KA 5 1 Out-of-frame Inter-chr p15.5 q11.22 31496 ChimerSeq STARFusion TCGA_RNA-Seq MTND4P12-IGH@ MTND4P12 chr5 134263511 - IGH@ chr14 106174442 - Exonic hg19 KIRP TCGA-5P-A9KA 3 7 Out-of-frame Inter-chr q31.1 32.33 31497 ChimerSeq STARFusion TCGA_RNA-Seq MTND4P12-IGHA1 MTND4P12 chr5 134263511 - IGHA1 chr14 106174442 - Exonic hg19 KIRP TCGA-5P-A9KA 3 7 Out-of-frame Inter-chr q31.1 31498 ChimerSeq STARFusion TCGA_RNA-Seq PFKL-AIRE PFKL chr21 45739711 + AIRE chr21 45708451 + Exonic hg19 KIRP TCGA-F9-A97G 9 29 Out-of-frame Intra-chr q22.3 q22.3 Transcription factor Seq+ 31499 ChimerSeq STARFusion TCGA_RNA-Seq PFKL-AIRE PFKL chr21 45739294 + AIRE chr21 45709540 + Exonic hg19 KIRP TCGA-F9-A97G 5 29 Out-of-frame Intra-chr q22.3 q22.3 Transcription factor Seq+ 31500 ChimerSeq STARFusion TCGA_RNA-Seq GSR-CSMD1 GSR chr8 30541605 - CSMD1 chr8 2887035 - Exonic hg19 KIRP TCGA-J7-8537 27 85 In-Frame Intra-chr p12 p23.2 Tumor suppressor gene Seq+ 31501 ChimerSeq STARFusion TCGA_RNA-Seq TFE3-DVL2 TFE3 chrX 48897982 - DVL2 chr17 7132766 - Exonic hg19 KIRP TCGA-J7-8537 24 71 Out-of-frame Inter-chr p11.23 Oncogene Transcription factor p13.1 Seq+ 31502 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0319L-UBA6 KIAA0319L chr1 35972213 - UBA6 chr4 68534392 - Exonic hg19 KIRP TCGA-J7-8537 18 74 In-Frame Inter-chr p34.3 q13.2 Seq+ 31503 ChimerSeq STARFusion TCGA_RNA-Seq DVL2-TFE3 DVL2 chr17 7133127 - TFE3 chrX 48896935 - Exonic hg19 KIRP TCGA-J7-8537 16 46 In-Frame Inter-chr p13.1 p11.23 Oncogene Transcription factor KB Pub Seq+ 31504 ChimerSeq STARFusion TCGA_RNA-Seq LAMA1-IGKC LAMA1 chr18 6954025 - IGKC chr2 89161431 - Exonic hg19 KIRP TCGA-J7-8537 13 1 Out-of-frame Inter-chr p11.31 p11.2 31505 ChimerSeq STARFusion TCGA_RNA-Seq CSDC2-ACO2 CSDC2 chr22 41957187 + ACO2 chr22 41895730 + Exonic hg19 KIRP TCGA-J7-8537 6 19 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 31506 ChimerSeq STARFusion TCGA_RNA-Seq PARG-BMS1 PARG chr10 51093249 - BMS1 chr10 43287075 + Exonic hg19 KIRP TCGA-J7-8537 4 10 In-Frame Intra-chr q11.23 q11.21 31507 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1024-IGKC KIAA1024 chr15 79750476 + IGKC chr2 89161075 - Exonic hg19 KIRP TCGA-J7-8537 5 2 Out-of-frame Inter-chr q25.1 p11.2 31508 ChimerSeq STARFusion TCGA_RNA-Seq SFPQ-TFE3 SFPQ chr1 35654604 - TFE3 chrX 48898095 - Exonic hg19 KIRP TCGA-G7-7501 75 320 In-Frame Inter-chr p34.3 p11.23 Oncogene Transcription factor KB Pub Seq+ 31509 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 KIRP TCGA-BQ-7045 7 0 Out-of-frame Inter-chr q13.33 p21.1 31510 ChimerSeq STARFusion TCGA_RNA-Seq HCG4P5-SPP1 HCG4P5 chr6 29910367 - SPP1 chr4 88896868 + Exonic hg19 KIRP TCGA-BQ-7044 4 13 Out-of-frame Inter-chr q22.1 31511 ChimerSeq STARFusion TCGA_RNA-Seq BAIAP2L1-MET BAIAP2L1 chr7 97939757 - MET chr7 116414935 + Exonic hg19 KIRP TCGA-BQ-7049 48 174 In-Frame Intra-chr q22.1 q31.2 TK:Met Oncogene Seq+ 31512 ChimerSeq STARFusion TCGA_RNA-Seq ITGB5-IGL@ ITGB5 chr3 124485084 - IGL@ chr22 23248510 + Exonic hg19 KIRP TCGA-BQ-7049 17 2 Out-of-frame Inter-chr q21.2 q11.22 31513 ChimerSeq STARFusion TCGA_RNA-Seq TMEM127-IGL@ TMEM127 chr2 96914666 - IGL@ chr22 23247173 + Exonic hg19 KIRP TCGA-BQ-7049 9 1 Out-of-frame Inter-chr q11.2 Tumor suppressor gene q11.22 31514 ChimerSeq STARFusion TCGA_RNA-Seq TFEB-COL21A1 TFEB chr6 41703088 - COL21A1 chr6 56047454 - Exonic hg19 KIRP TCGA-BQ-7048 6 30 5'UTR-5'UTR Intra-chr p21.1 Transcription factor p12.1 Seq+ 31515 ChimerSeq STARFusion TCGA_RNA-Seq MTND4P12-MTATP8P1 MTND4P12 chr5 134263511 - MTATP8P1 chr1 569017 + Exonic hg19 KIRP TCGA-A4-8311 3 4 Out-of-frame Inter-chr q31.1 p36.33 31516 ChimerSeq STARFusion TCGA_RNA-Seq SRPK2-PRKAR2B SRPK2 chr7 104800954 - PRKAR2B chr7 106791367 + Exonic hg19 KIRP TCGA-5P-A9JZ 130 352 In-Frame Intra-chr q22.3 CMGC:SRPK Seq+ 31517 ChimerSeq STARFusion TCGA_RNA-Seq DOCK4-IMMP2L DOCK4 chr7 111846157 - IMMP2L chr7 110603621 - Exonic hg19 KIRP TCGA-5P-A9JZ 12 48 Out-of-frame Intra-chr q31.1 q31.1 KB Pub Seq+ 31518 ChimerSeq STARFusion TCGA_RNA-Seq SRPK2-ZC3HC1 SRPK2 chr7 104800954 - ZC3HC1 chr7 129688984 - Exonic hg19 KIRP TCGA-5P-A9JZ 9 46 Out-of-frame Intra-chr q22.3 CMGC:SRPK q32.2 Seq+ 31519 ChimerSeq STARFusion TCGA_RNA-Seq SND1-AKAP9 SND1 chr7 127447627 + AKAP9 chr7 91734992 + Exonic hg19 KIRP TCGA-5P-A9JZ 6 14 Out-of-frame Intra-chr q32.1 q21.2 Oncogene Seq+ 31520 ChimerSeq STARFusion TCGA_RNA-Seq BRAF-CUL1 BRAF chr7 140549911 - CUL1 chr7 148391242 + Exonic hg19 KIRP TCGA-5P-A9JZ 5 9 CDS-5'UTR Intra-chr q34 TKL:RAF Oncogene q36.1 Tumor suppressor gene Seq+ 31521 ChimerSeq STARFusion TCGA_RNA-Seq BRAF-CUL1 BRAF chr7 140549911 - CUL1 chr7 148427054 + Exonic hg19 KIRP TCGA-5P-A9JZ 4 9 CDS-5'UTR Intra-chr q34 TKL:RAF Oncogene q36.1 Tumor suppressor gene Seq+ 31522 ChimerSeq STARFusion TCGA_RNA-Seq SND1-AKAP9 SND1 chr7 127447627 + AKAP9 chr7 91739436 + Exonic hg19 KIRP TCGA-5P-A9JZ 2 14 Out-of-frame Intra-chr q32.1 q21.2 Oncogene Seq+ 31523 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD33B-NIPBL ANKRD33B chr5 10564945 + NIPBL chr5 37058993 + Exonic hg19 KIRP TCGA-B9-A5W9 36 123 In-Frame Intra-chr p15.2 p13.2 Seq+ 31524 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD33B-NIPBL ANKRD33B chr5 10564945 + NIPBL chr5 37063892 + Exonic hg19 KIRP TCGA-B9-A5W9 10 123 In-Frame Intra-chr p15.2 p13.2 Seq+ 31525 ChimerSeq STARFusion TCGA_RNA-Seq LMBRD2-ADAMTS12 LMBRD2 chr5 36108636 - ADAMTS12 chr5 33751653 - Exonic hg19 KIRP TCGA-B9-A5W9 11 83 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 31526 ChimerSeq STARFusion TCGA_RNA-Seq NDUFS4-TMPRSS2 NDUFS4 chr5 52954454 + TMPRSS2 chr21 42838080 - Exonic hg19 KIRP TCGA-B9-A5W9 6 52 Out-of-frame Inter-chr q11.2 q22.3 Seq+ 31527 ChimerSeq STARFusion TCGA_RNA-Seq ATP5J-HCN1 ATP5J chr21 27107164 - HCN1 chr5 45462109 - Exonic hg19 KIRP TCGA-B9-A5W9 13 14 5'UTR-CDS Inter-chr q21.3 p12 Seq+ 31528 ChimerSeq STARFusion TCGA_RNA-Seq DYRK1A-HUNK DYRK1A chr21 38792686 + HUNK chr21 33296780 + Exonic hg19 KIRP TCGA-B9-A5W9 7 20 Out-of-frame Intra-chr q22.13 CMGC:DYRK q22.11 CAMK:CAMKL Seq+ 31529 ChimerSeq STARFusion TCGA_RNA-Seq SRD5A1-C1QTNF3 SRD5A1 chr5 6633982 + C1QTNF3 chr5 34035863 - Exonic hg19 KIRP TCGA-B9-A5W9 3 13 3'UTR-CDS Intra-chr p15.31 p13.2 Seq+ 31530 ChimerSeq STARFusion TCGA_RNA-Seq EVA1C-TMEM50B EVA1C chr21 33785321 + TMEM50B chr21 34805109 - Exonic hg19 KIRP TCGA-B9-A5W9 4 6 Out-of-frame Intra-chr q22.11 Seq+ 31531 ChimerSeq STARFusion TCGA_RNA-Seq PCBP3-GRIK1 PCBP3 chr21 47063782 + GRIK1 chr21 30971257 - Exonic hg19 KIRP TCGA-B9-A5W9 3 7 5'UTR-CDS Intra-chr q22.3 q21.3 Seq+ 31532 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-PIP5K1P1 KCTD20 chr6 36457999 + PIP5K1P1 chr6 7987766 + Exonic hg19 KIRP TCGA-F9-A7VF 6 0 Out-of-frame Intra-chr p21.31 p24.3 31533 ChimerSeq STARFusion TCGA_RNA-Seq TSC2-SYNGR3 TSC2 chr16 2120613 + SYNGR3 chr16 2041974 + Exonic hg19 KIRP TCGA-GL-7966 4 10 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 31534 ChimerSeq STARFusion TCGA_RNA-Seq PIP4K2B-RPL23 PIP4K2B chr17 36933940 - RPL23 chr17 37006728 - Exonic hg19 KIRP TCGA-GL-7966 4 9 Out-of-frame Intra-chr q12 q12 Seq+ 31535 ChimerSeq STARFusion TCGA_RNA-Seq SAMD4A-TIMM9 SAMD4A chr14 55034830 + TIMM9 chr14 58878689 - Exonic hg19 KIRP TCGA-A4-7997 2 15 CDS-5'UTR Intra-chr q22.2 q23.1 Seq+ 31536 ChimerSeq STARFusion TCGA_RNA-Seq IQGAP1-ZNF774 IQGAP1 chr15 90934105 + ZNF774 chr15 90897874 + Exonic hg19 KIRP TCGA-5P-A9K4 2 9 CDS-5'UTR Intra-chr q26.1 q26.1 Transcription factor Seq+ 31537 ChimerSeq STARFusion TCGA_RNA-Seq ACBD5-ANKRD26 ACBD5 chr10 27520677 - ANKRD26 chr10 27284076 - Exonic hg19 KIRP TCGA-5P-A9K9 6 28 3'UTR-3'UTR Intra-chr p12.1 p12.1 Seq+ 31538 ChimerSeq STARFusion TCGA_RNA-Seq BCR-ABL1 BCR chr22 23632600 + ABL1 chr9 133729451 + Exonic hg19 LAML TCGA-AB-2901_700FEAAXX_2 5 22 In-Frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q34.12 TK:Abl Oncogene KB Pub Seq+ 31539 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LAML TCGA-AB-2901_700FEAAXX_2 8 10 In-Frame Intra-chr p13.3 p13.3 31540 ChimerSeq STARFusion TCGA_RNA-Seq SEC63-FIG4 SEC63 chr6 108197768 - FIG4 chr6 110106173 + Exonic hg19 LAML TCGA-AB-2901_700FEAAXX_2 5 5 Out-of-frame Intra-chr q21 q21 Seq+ 31541 ChimerSeq STARFusion TCGA_RNA-Seq ABL1-BCR ABL1 chr9 133589842 + BCR chr22 23634728 + Exonic hg19 LAML TCGA-AB-2901_700FEAAXX_2 4 7 In-Frame Inter-chr q34.12 TK:Abl Oncogene q11.23 Atypical:BCR Oncogene Tumor suppressor gene Seq+ 31542 ChimerSeq STARFusion TCGA_RNA-Seq GOSR1-ZNF207 GOSR1 chr17 28811788 + ZNF207 chr17 30696314 + Exonic hg19 LAML TCGA-AB-2820_700GJAAXX_2 2 10 In-Frame Intra-chr q11.2 q11.2 Transcription factor Seq+ 31543 ChimerSeq STARFusion TCGA_RNA-Seq VTI1B-RDH11 VTI1B chr14 68141092 - RDH11 chr14 68159769 - Exonic hg19 LAML TCGA-AB-2956_7046WAAXX_4 3 9 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 31544 ChimerSeq STARFusion TCGA_RNA-Seq KMT2A-MLLT3 KMT2A chr11 118353210 + MLLT3 chr9 20365742 - Exonic hg19 LAML TCGA-AB-2956_7046WAAXX_4 4 3 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor p21.3 KB Pub Seq+ 31545 ChimerSeq STARFusion TCGA_RNA-Seq VTI1B-RDH11 VTI1B chr14 68141092 - RDH11 chr14 68159310 - Exonic hg19 LAML TCGA-AB-2956_7046WAAXX_4 2 8 In-Frame Intra-chr q24.1 q24.1 Seq+ 31546 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74325755 + RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2982_61TV6AAXX_1 2 16 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31547 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 + MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2892_6162NAAXX_2 4 28 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 31548 ChimerSeq STARFusion TCGA_RNA-Seq MECOM-RPN1 MECOM chr3 169381124 - RPN1 chr3 128363826 - Exonic hg19 LAML TCGA-AB-2944_703RKAAXX_7 10 9 Out-of-frame Intra-chr q26.2 Transcription factor q21.3 Seq+ 31549 ChimerSeq STARFusion TCGA_RNA-Seq KMT2A-ELL KMT2A chr11 118353210 + ELL chr19 18576728 - Exonic hg19 LAML TCGA-AB-2834_6166WAAXX_3 3 13 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor p13.11 KB Pub Seq+ 31550 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74325755 + RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2803_61GAEAAXX_4 2 12 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31551 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 + MYH11 chr16 15820911 - Exonic hg19 LAML TCGA-AB-2828_61673AAXX_4 8 24 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 31552 ChimerSeq STARFusion TCGA_RNA-Seq NF1-LRRC37B NF1 chr17 29422387 + LRRC37B chr17 30362584 + Exonic hg19 LAML TCGA-AB-2952_631TVAAXX_1 3 3 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 31553 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74325755 + RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2982_61YB3AAXX_2 3 9 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31554 ChimerSeq STARFusion TCGA_RNA-Seq BCR-ABL1 BCR chr22 23632600 + ABL1 chr9 133729451 + Exonic hg19 LAML TCGA-AB-2901_61GABAAXX_2 6 22 In-Frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q34.12 TK:Abl Oncogene KB Pub Seq+ 31555 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LAML TCGA-AB-2901_61GABAAXX_2 7 13 In-Frame Intra-chr p13.3 p13.3 31556 ChimerSeq STARFusion TCGA_RNA-Seq ABL1-BCR ABL1 chr9 133589842 + BCR chr22 23634728 + Exonic hg19 LAML TCGA-AB-2901_61GABAAXX_2 4 7 In-Frame Inter-chr q34.12 TK:Abl Oncogene q11.23 Atypical:BCR Oncogene Tumor suppressor gene Seq+ 31557 ChimerSeq STARFusion TCGA_RNA-Seq SEC63-FIG4 SEC63 chr6 108197768 - FIG4 chr6 110106173 + Exonic hg19 LAML TCGA-AB-2901_61GABAAXX_2 2 4 Out-of-frame Intra-chr q21 q21 Seq+ 31558 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 + MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2889_61HNFAAXX_3 7 30 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 31559 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 + MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2881_61GABAAXX_3 10 13 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 31560 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LAML TCGA-AB-2929_703RKAAXX_2 6 9 In-Frame Intra-chr p13.3 p13.3 31561 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-IGHG2 DHRSX chrY 2134829 - IGHG2 chr14 106111128 - Exonic hg19 LAML TCGA-AB-2882_7046WAAXX_6 12 1 Out-of-frame Inter-chr p22.33 31562 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-IGHG2 DHRSX chrY 2134829 - IGHG2 chr14 106209409 - Exonic hg19 LAML TCGA-AB-2882_7046WAAXX_6 10 1 Out-of-frame Inter-chr p22.33 31563 ChimerSeq STARFusion TCGA_RNA-Seq LTBP1-BIRC6 LTBP1 chr2 33246273 + BIRC6 chr2 32631567 + Exonic hg19 LAML TCGA-AB-2931_704G6AAXX_2 2 5 In-Frame Intra-chr p22.3 p22.3 Seq+ 31564 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 + MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2888_61TV6AAXX_2 3 8 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 31565 ChimerSeq STARFusion TCGA_RNA-Seq NF1-LRRC37B NF1 chr17 29422387 + LRRC37B chr17 30362584 + Exonic hg19 LAML TCGA-AB-2952_632BDAAXX_4 2 4 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 31566 ChimerSeq STARFusion TCGA_RNA-Seq EIF4A1-KLF2 EIF4A1 chr17 7476182 + KLF2 chr19 16437667 + Exonic hg19 LAML TCGA-AB-2810_700GEAAXX_7 4 0 Out-of-frame Inter-chr p13.1 p13.11 Transcription factor Seq+ 31567 ChimerSeq STARFusion TCGA_RNA-Seq MTATP6P1-LYZ MTATP6P1 chr1 569436 + LYZ chr12 69747589 + Exonic hg19 LAML TCGA-AB-2842_61660AAXX_4 3 2 Out-of-frame Inter-chr p36.33 q15 31568 ChimerSeq STARFusion TCGA_RNA-Seq NUCB1-RUVBL2 NUCB1 chr19 49407711 + RUVBL2 chr19 49513033 + Exonic hg19 LAML TCGA-AB-2935_704G6AAXX_1 3 10 In-Frame Intra-chr q13.33 q13.33 Seq+ 31569 ChimerSeq STARFusion TCGA_RNA-Seq KMT2A-MLLT3 KMT2A chr11 118353210 + MLLT3 chr9 20365742 - Exonic hg19 LAML TCGA-AB-2956_7043VAAXX_1 2 9 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor p21.3 KB Pub Seq+ 31570 ChimerSeq STARFusion TCGA_RNA-Seq RPS11-FLT3LG RPS11 chr19 50001303 + FLT3LG chr19 49977860 + Exonic hg19 LAML TCGA-AB-2912_613RTAAXX_6 33 115 5'UTR-5'UTR Intra-chr q13.33 q13.33 Seq+ 31571 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LAML TCGA-AB-2875_61LMEAAXX_4 5 12 In-Frame Intra-chr p13.3 p13.3 31572 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74325755 + RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2897_700FEAAXX_5 4 13 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31573 ChimerSeq STARFusion TCGA_RNA-Seq KMT2A-ELL KMT2A chr11 118355690 + ELL chr19 18569139 - Exonic hg19 LAML TCGA-AB-2911_613RTAAXX_4 4 4 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor p13.11 KB Pub Seq+ 31574 ChimerSeq STARFusion TCGA_RNA-Seq BCR-ABL1 BCR chr22 23632600 + ABL1 chr9 133729451 + Exonic hg19 LAML TCGA-AB-2941_703RKAAXX_5 11 37 In-Frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q34.12 TK:Abl Oncogene KB Pub Seq+ 31575 ChimerSeq STARFusion TCGA_RNA-Seq ABL1-BCR ABL1 chr9 133589842 + BCR chr22 23634728 + Exonic hg19 LAML TCGA-AB-2941_703RKAAXX_5 5 6 In-Frame Inter-chr q34.12 TK:Abl Oncogene q11.23 Atypical:BCR Oncogene Tumor suppressor gene Seq+ 31576 ChimerSeq STARFusion TCGA_RNA-Seq DOCK6-CCDC130 DOCK6 chr19 11339616 - CCDC130 chr19 13862422 + Exonic hg19 LAML TCGA-AB-2941_703RKAAXX_5 3 7 CDS-5'UTR Intra-chr p13.2 p13.13 Seq+ 31577 ChimerSeq STARFusion TCGA_RNA-Seq KMT2A-ELL KMT2A chr11 118355029 + ELL chr19 18583692 - Exonic hg19 LAML TCGA-AB-2844_700GJAAXX_8 3 19 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor p13.11 KB Pub Seq+ 31578 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 124968142 - SCARB1 chr12 125263132 - Exonic hg19 LAML TCGA-AB-2848_700D3AAXX_3 4 23 In-Frame Intra-chr q24.31 q24.31 Seq+ 31579 ChimerSeq STARFusion TCGA_RNA-Seq RUNX1-MECOM RUNX1 chr21 36206707 - MECOM chr3 169099312 - Exonic hg19 LAML TCGA-AB-2915_704G6AAXX_8 11 32 In-Frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q26.2 Transcription factor KB Pub Seq+ 31580 ChimerSeq STARFusion TCGA_RNA-Seq RUNX1-MECOM RUNX1 chr21 36231771 - MECOM chr3 169099312 - Exonic hg19 LAML TCGA-AB-2915_704G6AAXX_8 2 32 In-Frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q26.2 Transcription factor KB Pub Seq+ 31581 ChimerSeq STARFusion TCGA_RNA-Seq DPM1-GRID1 DPM1 chr20 49571723 - GRID1 chr10 87675996 - Exonic hg19 LAML TCGA-AB-2915_704G6AAXX_8 4 6 In-Frame Inter-chr q13.13 q23.2 Seq+ 31582 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 + MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2889_61LMEAAXX_3 6 39 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 31583 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 + MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2870_700F8AAXX_6 8 61 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 31584 ChimerSeq STARFusion TCGA_RNA-Seq PICALM-MLLT10 PICALM chr11 85685751 - MLLT10 chr10 21940602 + Exonic hg19 LAML TCGA-AB-2849_6166WAAXX_5 5 19 In-Frame Inter-chr q14.2 p12.31 Oncogene KB Pub Seq+ 31585 ChimerSeq STARFusion TCGA_RNA-Seq PICALM-MLLT10 PICALM chr11 85692172 - MLLT10 chr10 21940602 + Exonic hg19 LAML TCGA-AB-2849_6166WAAXX_5 2 19 In-Frame Inter-chr q14.2 p12.31 Oncogene KB Pub Seq+ 31586 ChimerSeq STARFusion TCGA_RNA-Seq MLLT10-PICALM MLLT10 chr10 21906136 + PICALM chr11 85670103 - Exonic hg19 LAML TCGA-AB-2849_6166WAAXX_5 4 7 In-Frame Inter-chr p12.31 Oncogene q14.2 KB Pub Seq+ 31587 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 + MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2914_61646AAXX_2 4 19 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 31588 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74325755 + RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2872_70417AAXX_3 3 12 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31589 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PML RARA chr17 38487648 + PML chr15 74326819 + Exonic hg19 LAML TCGA-AB-2872_70417AAXX_3 2 3 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 31590 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LAML TCGA-AB-2940_616EAAAXX_4 3 3 In-Frame Intra-chr p13.3 p13.3 31591 ChimerSeq STARFusion TCGA_RNA-Seq KPNB1-ACE KPNB1 chr17 45736026 + ACE chr17 61584602 + Exonic hg19 LAML TCGA-AB-2920_631TVAAXX_2 15 99 CDS-3'UTR Intra-chr q21.32 q23.3 31592 ChimerSeq STARFusion TCGA_RNA-Seq KPNB1-ACE KPNB1 chr17 45736026 + ACE chr17 61584602 + Exonic hg19 LAML TCGA-AB-2920_631TVAAXX_2 15 93 CDS-3'UTR Intra-chr q21.32 q23.3 31593 ChimerSeq STARFusion TCGA_RNA-Seq KPNB1-ACE KPNB1 chr17 45736026 + ACE chr17 61584417 + Exonic hg19 LAML TCGA-AB-2920_631TVAAXX_2 9 98 CDS-3'UTR Intra-chr q21.32 q23.3 31594 ChimerSeq STARFusion TCGA_RNA-Seq KPNB1-ACE KPNB1 chr17 45736026 + ACE chr17 61584417 + Exonic hg19 LAML TCGA-AB-2920_631TVAAXX_2 9 93 CDS-3'UTR Intra-chr q21.32 q23.3 31595 ChimerSeq STARFusion TCGA_RNA-Seq KPNB1-ACE3P KPNB1 chr17 45736026 + ACE3P chr17 61584417 + Exonic hg19 LAML TCGA-AB-2920_631TVAAXX_2 9 10 Out-of-frame Intra-chr q21.32 q23.3 Seq+ 31596 ChimerSeq STARFusion TCGA_RNA-Seq XIAP-OLR1 XIAP chrX 122994143 + OLR1 chr12 10324689 - Exonic hg19 LAML TCGA-AB-2920_631TVAAXX_2 3 15 5'UTR-5'UTR Inter-chr q25 p13.2 31597 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 + MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2892_613RTAAXX_2 3 22 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 31598 ChimerSeq STARFusion TCGA_RNA-Seq RPS11-FLT3LG RPS11 chr19 50001303 + FLT3LG chr19 49977860 + Exonic hg19 LAML TCGA-AB-2912_6162NAAXX_6 44 136 5'UTR-5'UTR Intra-chr q13.33 q13.33 Seq+ 31599 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LAML TCGA-AB-2927_61FFWAAXX_5 9 26 In-Frame Intra-chr p13.3 p13.3 31600 ChimerSeq STARFusion TCGA_RNA-Seq MKNK2-RNF126 MKNK2 chr19 2041839 - RNF126 chr19 652884 - Exonic hg19 LAML TCGA-AB-2897_61GABAAXX_5 4 3 In-Frame Intra-chr p13.3 p13.3 Seq+ 31601 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 + MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2846_700J3AAXX_8 5 20 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 31602 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116242 + MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2846_700J3AAXX_8 2 20 Out-of-frame Intra-chr q22.1 Oncogene KB Pub Seq+ 31603 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74315749 + RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2998_700D6AAXX_3 7 25 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31604 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PML RARA chr17 38487648 + PML chr15 74325497 + Exonic hg19 LAML TCGA-AB-2998_700D6AAXX_3 3 16 Out-of-frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 31605 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LAML TCGA-AB-2868_700J0AAXX_2 3 11 In-Frame Intra-chr p13.3 p13.3 31606 ChimerSeq STARFusion TCGA_RNA-Seq MIR181A2HG-OBP2B MIR181A2HG chr9 127421020 + OBP2B chr9 136081803 - Exonic hg19 LAML TCGA-AB-2868_700J0AAXX_2 2 11 5'UTR-CDS Intra-chr q33.3 31607 ChimerSeq STARFusion TCGA_RNA-Seq GAPVD1-PTGR1 GAPVD1 chr9 128024238 + PTGR1 chr9 114326542 - Exonic hg19 LAML TCGA-AB-2868_700J0AAXX_2 2 5 5'UTR-CDS Intra-chr q33.3 q31.3 Seq+ 31608 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LAML TCGA-AB-2999_61YB3AAXX_4 11 21 In-Frame Intra-chr p13.3 p13.3 31609 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74325056 + RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2999_61YB3AAXX_4 2 5 Out-of-frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31610 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PML RARA chr17 38487648 + PML chr15 74317198 + Exonic hg19 LAML TCGA-AB-2840_61GAFAAXX_2 10 17 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 31611 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74315749 + RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2840_61GAFAAXX_2 5 18 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31612 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB7A-TNK1 ZBTB7A chr19 4053969 - TNK1 chr17 7286155 + Exonic hg19 LAML TCGA-AB-2938_70417AAXX_6_GCTCCA 54 152 CDS-5'UTR Inter-chr p13.3 Transcription factor TK:Ack Tumor suppressor gene Seq+ 31613 ChimerSeq STARFusion TCGA_RNA-Seq POLR2A-FBN3 POLR2A chr17 7388176 + FBN3 chr19 8156474 - Exonic hg19 LAML TCGA-AB-2938_70417AAXX_6_GCTCCA 10 16 Out-of-frame Inter-chr p13.1 p13.2 Seq+ 31614 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LAML TCGA-AB-2996_700J3AAXX_4 10 28 In-Frame Intra-chr p13.3 p13.3 31615 ChimerSeq STARFusion TCGA_RNA-Seq PDXDC2P-PDPR PDXDC2P chr16 70065803 - PDPR chr16 70190640 + Exonic hg19 LAML TCGA-AB-2869_61GABAAXX_6 4 13 3'UTR-CDS Intra-chr q22.1 q22.1 31616 ChimerSeq STARFusion TCGA_RNA-Seq KMT2A-ELL KMT2A chr11 118355029 + ELL chr19 18583692 - Exonic hg19 LAML TCGA-AB-2844_700GFAAXX_1 2 17 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor p13.11 KB Pub Seq+ 31617 ChimerSeq STARFusion TCGA_RNA-Seq EDAR-IGL@ EDAR chr2 109545734 - IGL@ chr22 23241798 + Exonic hg19 LAML TCGA-AB-2857_700APAAXX_1 4 0 Out-of-frame Inter-chr q13 q11.22 31618 ChimerSeq STARFusion TCGA_RNA-Seq EDAR-IGLC2 EDAR chr2 109545734 - IGLC2 chr22 23241798 + Exonic hg19 LAML TCGA-AB-2857_700APAAXX_1 4 0 Out-of-frame Inter-chr q13 q11.22 31619 ChimerSeq STARFusion TCGA_RNA-Seq EDAR-IGLJ2 EDAR chr2 109545734 - IGLJ2 chr22 23241798 + Exonic hg19 LAML TCGA-AB-2857_700APAAXX_1 4 0 Out-of-frame Inter-chr q13 q11.22 31620 ChimerSeq STARFusion TCGA_RNA-Seq DDX20-TBX15 DDX20 chr1 112303470 + TBX15 chr1 119428139 - Exonic hg19 LAML TCGA-AB-2857_700APAAXX_1 2 3 In-Frame Intra-chr p13.2 p12 Transcription factor Seq+ 31621 ChimerSeq STARFusion TCGA_RNA-Seq DNMT3B-MDM4 DNMT3B chr20 31390276 + MDM4 chr1 204494612 + Exonic hg19 LAML TCGA-AB-2904_6165KAAXX_2 13 14 CDS-5'UTR Inter-chr q11.21 Tumor suppressor gene q32.1 Oncogene Seq+ 31622 ChimerSeq STARFusion TCGA_RNA-Seq KMT2A-ELL KMT2A chr11 118355690 + ELL chr19 18569139 - Exonic hg19 LAML TCGA-AB-2911_6162NAAXX_4 2 8 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor p13.11 KB Pub Seq+ 31623 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PML RARA chr17 38487648 + PML chr15 74326819 + Exonic hg19 LAML TCGA-AB-3012_61LMEAAXX_6 4 14 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 31624 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PML RARA chr17 38499119 + PML chr15 74326819 + Exonic hg19 LAML TCGA-AB-3012_61LMEAAXX_6 2 14 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 31625 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LAML TCGA-AB-2927_704G6AAXX_5 12 28 In-Frame Intra-chr p13.3 p13.3 31626 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74325755 + RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2803_61671AAXX_1 3 11 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31627 ChimerSeq STARFusion TCGA_RNA-Seq ARMCX4-MCM7 ARMCX4 chrX 100702547 + MCM7 chr7 99693731 - Exonic hg19 LAML TCGA-AB-2854_61GAFAAXX_1 3 1 Out-of-frame Inter-chr q22.1 q22.1 31628 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-ASAP1 PVT1 chr8 128903244 + ASAP1 chr8 131127981 - Exonic hg19 LAML TCGA-AB-2876_6165JAAXX_1 19 109 5'UTR-CDS Intra-chr q24.21 q24.22 31629 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-ASAP1 PVT1 chr8 128903244 + ASAP1 chr8 131124568 - Exonic hg19 LAML TCGA-AB-2876_6165JAAXX_1 3 109 5'UTR-CDS Intra-chr q24.21 q24.22 31630 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CSNK1D IGH@ chr14 106090829 - CSNK1D chr17 80204615 - Exonic hg19 LAML TCGA-AB-2935_61FFWAAXX_1 9 0 Out-of-frame Inter-chr 32.33 q25.3 31631 ChimerSeq STARFusion TCGA_RNA-Seq IGHG2-CSNK1D IGHG2 chr14 106090829 - CSNK1D chr17 80204615 - Exonic hg19 LAML TCGA-AB-2935_61FFWAAXX_1 9 0 Out-of-frame Inter-chr q25.3 31632 ChimerSeq STARFusion TCGA_RNA-Seq NUCB1-RUVBL2 NUCB1 chr19 49407711 + RUVBL2 chr19 49513033 + Exonic hg19 LAML TCGA-AB-2935_61FFWAAXX_1 4 10 In-Frame Intra-chr q13.33 q13.33 Seq+ 31633 ChimerSeq STARFusion TCGA_RNA-Seq HBA1-HBZP1 HBA1 chr16 226950 + HBZP1 chr16 214507 + Exonic hg19 LAML TCGA-AB-2979_631WGAAXX_5 4 3 Out-of-frame Intra-chr p13.3 p13.3 31634 ChimerSeq STARFusion TCGA_RNA-Seq MLLT4-KMT2A MLLT4 chr6 168227917 + KMT2A chr11 118352430 + Exonic hg19 LAML TCGA-AB-2893_6165JAAXX_3 2 10 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor 31635 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 + MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2942_61GAJAAXX_6 8 10 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 31636 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LAML TCGA-AB-2942_61GAJAAXX_6 6 9 In-Frame Intra-chr p13.3 p13.3 31637 ChimerSeq STARFusion TCGA_RNA-Seq NSD1-NUP98 NSD1 chr5 176639196 + NUP98 chr11 3756554 - Exonic hg19 LAML TCGA-AB-2930_61FJYAAXX_3 20 14 In-Frame Inter-chr q35.3 Oncogene p15.4 Oncogene Tumor suppressor gene KB Pub Seq+ 31638 ChimerSeq STARFusion TCGA_RNA-Seq NUP98-NSD1 NUP98 chr11 3774546 - NSD1 chr5 176662822 + Exonic hg19 LAML TCGA-AB-2930_61FJYAAXX_3 2 2 In-Frame Inter-chr p15.4 Oncogene Tumor suppressor gene q35.3 Oncogene KB Pub Seq+ 31639 ChimerSeq STARFusion TCGA_RNA-Seq RUNX1-MECOM RUNX1 chr21 36206707 - MECOM chr3 169099312 - Exonic hg19 LAML TCGA-AB-2915_61FFWAAXX_8 12 41 In-Frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q26.2 Transcription factor KB Pub Seq+ 31640 ChimerSeq STARFusion TCGA_RNA-Seq RUNX1-MECOM RUNX1 chr21 36231771 - MECOM chr3 169099312 - Exonic hg19 LAML TCGA-AB-2915_61FFWAAXX_8 2 41 In-Frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q26.2 Transcription factor KB Pub Seq+ 31641 ChimerSeq STARFusion TCGA_RNA-Seq DPM1-GRID1 DPM1 chr20 49571723 - GRID1 chr10 87675996 - Exonic hg19 LAML TCGA-AB-2915_61FFWAAXX_8 4 11 In-Frame Inter-chr q13.13 q23.2 Seq+ 31642 ChimerSeq STARFusion TCGA_RNA-Seq CHD1-MTOR CHD1 chr5 98199112 - MTOR chr1 11273623 - Exonic hg19 LAML TCGA-AB-2939_704G6AAXX_7 7 13 Out-of-frame Inter-chr q21.1 Tumor suppressor gene p36.22 Oncogene Seq+ 31643 ChimerSeq STARFusion TCGA_RNA-Seq PRMT1-TLE6 PRMT1 chr19 50180573 + TLE6 chr19 2978196 + Exonic hg19 LAML TCGA-AB-2857_7009AAAXX_1 4 5 5'UTR-5'UTR Intra-chr q13.33 p13.3 Seq+ 31644 ChimerSeq STARFusion TCGA_RNA-Seq EDAR-IGL@ EDAR chr2 109545730 - IGL@ chr22 23241802 + Exonic hg19 LAML TCGA-AB-2857_7009AAAXX_1 4 0 Out-of-frame Inter-chr q13 q11.22 31645 ChimerSeq STARFusion TCGA_RNA-Seq EDAR-IGLC2 EDAR chr2 109545730 - IGLC2 chr22 23241802 + Exonic hg19 LAML TCGA-AB-2857_7009AAAXX_1 4 0 Out-of-frame Inter-chr q13 q11.22 31646 ChimerSeq STARFusion TCGA_RNA-Seq EDAR-IGLJ2 EDAR chr2 109545730 - IGLJ2 chr22 23241802 + Exonic hg19 LAML TCGA-AB-2857_7009AAAXX_1 4 0 Out-of-frame Inter-chr q13 q11.22 31647 ChimerSeq STARFusion TCGA_RNA-Seq DNMT3B-MDM4 DNMT3B chr20 31390276 + MDM4 chr1 204494612 + Exonic hg19 LAML TCGA-AB-2904_61GAEAAXX_2 9 14 CDS-5'UTR Inter-chr q11.21 Tumor suppressor gene q32.1 Oncogene Seq+ 31648 ChimerSeq STARFusion TCGA_RNA-Seq PICALM-MLLT10 PICALM chr11 85685751 - MLLT10 chr10 21940602 + Exonic hg19 LAML TCGA-AB-2855_700J0AAXX_7 11 29 In-Frame Inter-chr q14.2 p12.31 Oncogene KB Pub Seq+ 31649 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 + MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2815_61660AAXX_2 7 19 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 31650 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74315749 + RARA chr17 38499006 + Exonic hg19 LAML TCGA-AB-3001_7008LAAXX_2 12 28 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31651 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74315749 + RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-3001_7008LAAXX_2 2 28 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31652 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PML RARA chr17 38487648 + PML chr15 74317198 + Exonic hg19 LAML TCGA-AB-3001_7008LAAXX_2 5 8 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 31653 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LAML TCGA-AB-2929_70417AAXX_2 4 8 In-Frame Intra-chr p13.3 p13.3 31654 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74315749 + RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-3007_7008LAAXX_4 12 35 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31655 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PML RARA chr17 38487648 + PML chr15 74317198 + Exonic hg19 LAML TCGA-AB-3007_7008LAAXX_4 6 6 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 31656 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PML RARA chr17 38487648 + PML chr15 74317198 + Exonic hg19 LAML TCGA-AB-2991_61HMEAAXX_1 2 17 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 31657 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 124968142 - SCARB1 chr12 125263132 - Exonic hg19 LAML TCGA-AB-2848_700GEAAXX_1 3 21 In-Frame Intra-chr q24.31 q24.31 Seq+ 31658 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 + MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2846_700GJAAXX_7 5 17 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 31659 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 + MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2888_624YPAAXX_1 4 8 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 31660 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74325755 + RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2862_700GFAAXX_3 12 37 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31661 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PML RARA chr17 38487648 + PML chr15 74317198 + Exonic hg19 LAML TCGA-AB-2840_61627AAXX_2 11 17 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 31662 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74315749 + RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2840_61627AAXX_2 7 13 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31663 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PML RARA chr17 38487648 + PML chr15 74326819 + Exonic hg19 LAML TCGA-AB-2994_700F8AAXX_2 24 59 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 31664 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PML RARA chr17 38498669 + PML chr15 74326819 + Exonic hg19 LAML TCGA-AB-2994_700F8AAXX_2 4 59 5'UTR-CDS Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 31665 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74325755 + RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2994_700F8AAXX_2 4 17 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31666 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74325755 + RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2862_700GEAAXX_3 2 50 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31667 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PML RARA chr17 38487648 + PML chr15 74326819 + Exonic hg19 LAML TCGA-AB-2841_62P29AAXX_1 7 26 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 31668 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74325755 + RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2841_62P29AAXX_1 2 13 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31669 ChimerSeq STARFusion TCGA_RNA-Seq MLLT10-PPP2R1B MLLT10 chr10 21940697 + PPP2R1B chr11 111626174 - Exonic hg19 LAML TCGA-AB-2832_700H2AAXX_8 4 16 In-Frame Inter-chr p12.31 Oncogene q23.1 Tumor suppressor gene 31670 ChimerSeq STARFusion TCGA_RNA-Seq CXorf21-LYZ CXorf21 chrX 30577231 - LYZ chr12 69747556 + Exonic hg19 LAML TCGA-AB-2969_61GAEAAXX_1 3 1 Out-of-frame Inter-chr p21.2 q15 31671 ChimerSeq STARFusion TCGA_RNA-Seq KMT2A-MLLT4 KMT2A chr11 118355029 + MLLT4 chr6 168265231 + Exonic hg19 LAML TCGA-AB-2883_61GAEAAXX_6 4 16 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor 31672 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74315749 + RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2991_700F8AAXX_1 6 29 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31673 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LAML TCGA-AB-2884_61HMEAAXX_7 2 10 In-Frame Intra-chr p13.3 p13.3 31674 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPH1-ERG HNRNPH1 chr5 179047893 - ERG chr21 39755845 - Exonic hg19 LAML TCGA-AB-2814_61J4GAAXX_7 82 197 In-Frame Inter-chr q35.3 q22.2 Oncogene Transcription factor Seq+ 31675 ChimerSeq STARFusion TCGA_RNA-Seq MIR181A2HG-OBP2B MIR181A2HG chr9 127421020 + OBP2B chr9 136081803 - Exonic hg19 LAML TCGA-AB-2868_700H2AAXX_2 2 6 5'UTR-CDS Intra-chr q33.3 31676 ChimerSeq STARFusion TCGA_RNA-Seq GAPVD1-PTGR1 GAPVD1 chr9 128024238 + PTGR1 chr9 114312079 - Exonic hg19 LAML TCGA-AB-2868_700H2AAXX_2 2 5 5'UTR-CDS Intra-chr q33.3 q31.3 Seq+ 31677 ChimerSeq STARFusion TCGA_RNA-Seq PICALM-MLLT10 PICALM chr11 85685751 - MLLT10 chr10 21940602 + Exonic hg19 LAML TCGA-AB-2855_700H2AAXX_7 7 21 In-Frame Inter-chr q14.2 p12.31 Oncogene KB Pub Seq+ 31678 ChimerSeq STARFusion TCGA_RNA-Seq MLLT10-PICALM MLLT10 chr10 21906136 + PICALM chr11 85670103 - Exonic hg19 LAML TCGA-AB-2855_700H2AAXX_7 2 4 In-Frame Inter-chr p12.31 Oncogene q14.2 KB Pub Seq+ 31679 ChimerSeq STARFusion TCGA_RNA-Seq BCR-ABL1 BCR chr22 23524426 + ABL1 chr9 133729451 + Exonic hg19 LAML TCGA-AB-2817_700GFAAXX_5 11 33 In-Frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q34.12 TK:Abl Oncogene KB Pub Seq+ 31680 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LAML TCGA-AB-2838_700J0AAXX_1 6 19 In-Frame Intra-chr p13.3 p13.3 31681 ChimerSeq STARFusion TCGA_RNA-Seq SRPR-DISC1FP1 SRPR chr11 126137444 - DISC1FP1 chr11 90279922 + Exonic hg19 LAML TCGA-AB-2838_700J0AAXX_1 2 11 Out-of-frame Intra-chr q14.3 31682 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74315749 + RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2980_61646AAXX_8 3 17 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31683 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PML RARA chr17 38487648 + PML chr15 74317198 + Exonic hg19 LAML TCGA-AB-2980_61646AAXX_8 2 20 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 31684 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-RPL13A MALAT1 chr11 65267237 + RPL13A chr19 49994993 + Exonic hg19 LAML TCGA-AB-2986_700GJAAXX_1 3 2 Out-of-frame Inter-chr q13.1 q13.33 31685 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LAML TCGA-AB-2999_61U20AAXX_2 16 27 In-Frame Intra-chr p13.3 p13.3 31686 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74325755 + RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2999_61U20AAXX_2 2 11 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31687 ChimerSeq STARFusion TCGA_RNA-Seq HBA1-HBZP1 HBA1 chr16 226957 + HBZP1 chr16 214514 + Exonic hg19 LAML TCGA-AB-2979_631TVAAXX_4 5 2 Out-of-frame Intra-chr p13.3 p13.3 31688 ChimerSeq STARFusion TCGA_RNA-Seq RPL41-CD74 RPL41 chr12 56510577 + CD74 chr5 149792311 - Exonic hg19 LAML TCGA-AB-2979_631TVAAXX_4 5 1 Out-of-frame Inter-chr q13.2 q33.1 31689 ChimerSeq STARFusion TCGA_RNA-Seq HBA1-HBZP1 HBA1 chr16 226946 + HBZP1 chr16 214503 + Exonic hg19 LAML TCGA-AB-2979_631TVAAXX_4 4 2 Out-of-frame Intra-chr p13.3 p13.3 31690 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74315749 + RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2980_6164HAAXX_8 3 14 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31691 ChimerSeq STARFusion TCGA_RNA-Seq LTBP1-BIRC6 LTBP1 chr2 33246273 + BIRC6 chr2 32631567 + Exonic hg19 LAML TCGA-AB-2931_61FFWAAXX_2 5 6 In-Frame Intra-chr p22.3 p22.3 Seq+ 31692 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74315749 + RARA chr17 38499006 + Exonic hg19 LAML TCGA-AB-3001_616EAAAXX_1 3 35 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31693 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74315749 + RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-3001_616EAAAXX_1 2 35 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31694 ChimerSeq STARFusion TCGA_RNA-Seq CDK12-RPL19 CDK12 chr17 37628016 + RPL19 chr17 37359242 + Exonic hg19 LAML TCGA-AB-2932_704G6AAXX_6 4 2 Out-of-frame Intra-chr q12 Oncogene q12 31695 ChimerSeq STARFusion TCGA_RNA-Seq NSD1-NUP98 NSD1 chr5 176639196 + NUP98 chr11 3756554 - Exonic hg19 LAML TCGA-AB-2930_7043YAAXX_3 11 20 In-Frame Inter-chr q35.3 Oncogene p15.4 Oncogene Tumor suppressor gene KB Pub Seq+ 31696 ChimerSeq STARFusion TCGA_RNA-Seq NUP98-NSD1 NUP98 chr11 3765739 - NSD1 chr5 176662822 + Exonic hg19 LAML TCGA-AB-2930_7043YAAXX_3 2 3 In-Frame Inter-chr p15.4 Oncogene Tumor suppressor gene q35.3 Oncogene KB Pub Seq+ 31697 ChimerSeq STARFusion TCGA_RNA-Seq UBN2-FKBP1C UBN2 chr7 138992263 + FKBP1C chr6 63922169 + Exonic hg19 LAML TCGA-AB-2816_61GAFAAXX_4 3 1 Out-of-frame Inter-chr q34 q12 31698 ChimerSeq STARFusion TCGA_RNA-Seq BCR-ABL1 BCR chr22 23632600 + ABL1 chr9 133729451 + Exonic hg19 LAML TCGA-AB-2941_70417AAXX_8 6 35 In-Frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q34.12 TK:Abl Oncogene KB Pub Seq+ 31699 ChimerSeq STARFusion TCGA_RNA-Seq ABL1-BCR ABL1 chr9 133589842 + BCR chr22 23634728 + Exonic hg19 LAML TCGA-AB-2941_70417AAXX_8 7 13 In-Frame Inter-chr q34.12 TK:Abl Oncogene q11.23 Atypical:BCR Oncogene Tumor suppressor gene Seq+ 31700 ChimerSeq STARFusion TCGA_RNA-Seq DOCK6-CCDC130 DOCK6 chr19 11339616 - CCDC130 chr19 13862422 + Exonic hg19 LAML TCGA-AB-2941_70417AAXX_8 3 8 CDS-5'UTR Intra-chr p13.2 p13.13 Seq+ 31701 ChimerSeq STARFusion TCGA_RNA-Seq KPNB1-ACE KPNB1 chr17 45736026 + ACE chr17 61584602 + Exonic hg19 LAML TCGA-AB-2920_631WGAAXX_2 20 81 CDS-3'UTR Intra-chr q21.32 q23.3 31702 ChimerSeq STARFusion TCGA_RNA-Seq KPNB1-ACE KPNB1 chr17 45736026 + ACE chr17 61584602 + Exonic hg19 LAML TCGA-AB-2920_631WGAAXX_2 20 76 CDS-3'UTR Intra-chr q21.32 q23.3 31703 ChimerSeq STARFusion TCGA_RNA-Seq KPNB1-ACE KPNB1 chr17 45736026 + ACE chr17 61584417 + Exonic hg19 LAML TCGA-AB-2920_631WGAAXX_2 7 81 CDS-3'UTR Intra-chr q21.32 q23.3 31704 ChimerSeq STARFusion TCGA_RNA-Seq KPNB1-ACE KPNB1 chr17 45736026 + ACE chr17 61584417 + Exonic hg19 LAML TCGA-AB-2920_631WGAAXX_2 7 76 CDS-3'UTR Intra-chr q21.32 q23.3 31705 ChimerSeq STARFusion TCGA_RNA-Seq KPNB1-ACE3P KPNB1 chr17 45736026 + ACE3P chr17 61584417 + Exonic hg19 LAML TCGA-AB-2920_631WGAAXX_2 7 5 Out-of-frame Intra-chr q21.32 q23.3 Seq+ 31706 ChimerSeq STARFusion TCGA_RNA-Seq XIAP-OLR1 XIAP chrX 122994143 + OLR1 chr12 10324689 - Exonic hg19 LAML TCGA-AB-2920_631WGAAXX_2 3 15 5'UTR-5'UTR Inter-chr q25 p13.2 31707 ChimerSeq STARFusion TCGA_RNA-Seq CHST11-ATP1B4 CHST11 chr12 104995769 + ATP1B4 chrX 119500380 + Exonic hg19 LAML TCGA-AB-2920_631WGAAXX_2 3 7 In-Frame Inter-chr q23.3 q24 Seq+ 31708 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 + MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2881_700FEAAXX_3 7 20 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 31709 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPH1-ERG HNRNPH1 chr5 179047893 - ERG chr21 39755845 - Exonic hg19 LAML TCGA-AB-2814_61673AAXX_7 83 198 In-Frame Inter-chr q35.3 q22.2 Oncogene Transcription factor Seq+ 31710 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LAML TCGA-AB-2996_700GJAAXX_4 14 28 In-Frame Intra-chr p13.3 p13.3 31711 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PML RARA chr17 38499119 + PML chr15 74326819 + Exonic hg19 LAML TCGA-AB-3012_61HNFAAXX_6 4 15 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 31712 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP23-MPO ARHGAP23 chr17 36633905 + MPO chr17 56357381 - Exonic hg19 LAML TCGA-AB-3012_61HNFAAXX_6 3 1 Out-of-frame Intra-chr q12 q22 31713 ChimerSeq STARFusion TCGA_RNA-Seq BCR-ABL1 BCR chr22 23524426 + ABL1 chr9 133729451 + Exonic hg19 LAML TCGA-AB-2817_700GEAAXX_5 8 28 In-Frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q34.12 TK:Abl Oncogene KB Pub Seq+ 31714 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 + MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2870_61HMEAAXX_6 12 35 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 31715 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PML RARA chr17 38487648 + PML chr15 74326819 + Exonic hg19 LAML TCGA-AB-2994_61HMEAAXX_2 25 62 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 31716 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PML RARA chr17 38498669 + PML chr15 74326819 + Exonic hg19 LAML TCGA-AB-2994_61HMEAAXX_2 3 61 5'UTR-CDS Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 31717 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LAML TCGA-AB-2994_61HMEAAXX_2 10 29 In-Frame Intra-chr p13.3 p13.3 31718 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74325755 + RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2994_61HMEAAXX_2 3 27 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31719 ChimerSeq STARFusion TCGA_RNA-Seq MECOM-RPN1 MECOM chr3 169381124 - RPN1 chr3 128363826 - Exonic hg19 LAML TCGA-AB-2944_7046WAAXX_2 16 17 Out-of-frame Intra-chr q26.2 Transcription factor q21.3 Seq+ 31720 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 + MYH11 chr16 15820911 - Exonic hg19 LAML TCGA-AB-2828_61J4GAAXX_4 7 34 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 31721 ChimerSeq STARFusion TCGA_RNA-Seq GOSR1-ZNF207 GOSR1 chr17 28811788 + ZNF207 chr17 30696314 + Exonic hg19 LAML TCGA-AB-2820_700J3AAXX_2 3 10 In-Frame Intra-chr q11.2 q11.2 Transcription factor Seq+ 31722 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB7A-TNK1 ZBTB7A chr19 4053969 - TNK1 chr17 7286155 + Exonic hg19 LAML TCGA-AB-2938_61U24AAXX_3 50 150 CDS-5'UTR Inter-chr p13.3 Transcription factor TK:Ack Tumor suppressor gene Seq+ 31723 ChimerSeq STARFusion TCGA_RNA-Seq POLR2A-FBN3 POLR2A chr17 7388176 + FBN3 chr19 8156474 - Exonic hg19 LAML TCGA-AB-2938_61U24AAXX_3 11 9 Out-of-frame Inter-chr p13.1 p13.2 Seq+ 31724 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 + MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2815_6166WAAXX_2 6 21 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 31725 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74315749 + RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2823_70417AAXX_5_GAATAA 8 26 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31726 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PML RARA chr17 38487648 + PML chr15 74317198 + Exonic hg19 LAML TCGA-AB-2823_70417AAXX_5_GAATAA 6 29 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 31727 ChimerSeq STARFusion TCGA_RNA-Seq RAB2A-CLVS1 RAB2A chr8 61429812 + CLVS1 chr8 62044329 + Exonic hg19 LAML TCGA-AB-2823_70417AAXX_5_GAATAA 6 4 CDS-5'UTR Intra-chr q12.1 q12.2 Seq+ 31728 ChimerSeq STARFusion TCGA_RNA-Seq PRSS57-TPSAB1 PRSS57 chr19 686925 - TPSAB1 chr16 1292077 + Exonic hg19 LAML TCGA-AB-3006_61LMDAAXX_8 4 0 In-Frame Inter-chr p13.3 p13.3 31729 ChimerSeq STARFusion TCGA_RNA-Seq KMT2A-MLLT4 KMT2A chr11 118355029 + MLLT4 chr6 168265231 + Exonic hg19 LAML TCGA-AB-2883_6165KAAXX_4 4 11 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor 31730 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74315749 + RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2998_700HWAAXX_3 7 37 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31731 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PML RARA chr17 38487648 + PML chr15 74324913 + Exonic hg19 LAML TCGA-AB-2998_700HWAAXX_3 4 17 Out-of-frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 31732 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PML RARA chr17 38487648 + PML chr15 74325497 + Exonic hg19 LAML TCGA-AB-2998_700HWAAXX_3 2 17 Out-of-frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 31733 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P1-KLK6 PRSS3P1 chr7 142481912 + KLK6 chr19 51462572 - Exonic hg19 LAML TCGA-AB-2908_62046AAXX_2 41 0 Out-of-frame Inter-chr q13.41 Tumor suppressor gene 31734 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P1-KLK6 PRSS3P1 chr7 142471341 + KLK6 chr19 51462571 - Exonic hg19 LAML TCGA-AB-2908_62046AAXX_2 11 0 Out-of-frame Inter-chr q13.41 Tumor suppressor gene 31735 ChimerSeq STARFusion TCGA_RNA-Seq MCF2L-IGL@ MCF2L chr13 113753567 + IGL@ chr22 23241800 + Exonic hg19 LAML TCGA-AB-2908_62046AAXX_2 5 0 Out-of-frame Inter-chr q34 q11.22 31736 ChimerSeq STARFusion TCGA_RNA-Seq MCF2L-IGLC2 MCF2L chr13 113753567 + IGLC2 chr22 23241800 + Exonic hg19 LAML TCGA-AB-2908_62046AAXX_2 5 0 Out-of-frame Inter-chr q34 q11.22 31737 ChimerSeq STARFusion TCGA_RNA-Seq MCF2L-IGLJ2 MCF2L chr13 113753567 + IGLJ2 chr22 23241800 + Exonic hg19 LAML TCGA-AB-2908_62046AAXX_2 5 0 Out-of-frame Inter-chr q34 q11.22 31738 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116242 + MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2914_6164HAAXX_2 3 28 Out-of-frame Intra-chr q22.1 Oncogene KB Pub Seq+ 31739 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 + MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2914_6164HAAXX_2 3 25 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 31740 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 + MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2954_616EAAAXX_7 4 23 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 31741 ChimerSeq STARFusion TCGA_RNA-Seq MLLT10-PPP2R1B MLLT10 chr10 21940697 + PPP2R1B chr11 111626174 - Exonic hg19 LAML TCGA-AB-2832_700J0AAXX_8 4 18 In-Frame Inter-chr p12.31 Oncogene q23.1 Tumor suppressor gene 31742 ChimerSeq STARFusion TCGA_RNA-Seq SIK3-C11orf1 SIK3 chr11 116968859 - C11orf1 chr11 111753092 + Exonic hg19 LAML TCGA-AB-2832_700J0AAXX_8 6 9 In-Frame Intra-chr q23.3 q23.1 Seq+ 31743 ChimerSeq STARFusion TCGA_RNA-Seq NSD1-NUP98 NSD1 chr5 176639196 + NUP98 chr11 3756554 - Exonic hg19 LAML TCGA-AB-2856_616EAAAXX_2 6 19 In-Frame Inter-chr q35.3 Oncogene p15.4 Oncogene Tumor suppressor gene KB Pub Seq+ 31744 ChimerSeq STARFusion TCGA_RNA-Seq ULK4P1-CHRNA7 ULK4P1 chr15 32713883 - CHRNA7 chr15 32446108 + Exonic hg19 LAML TCGA-AB-2925_61HMEAAXX_5 2 4 3'UTR-CDS Intra-chr q13.3 q13.3 31745 ChimerSeq STARFusion TCGA_RNA-Seq PICALM-MLLT10 PICALM chr11 85685751 - MLLT10 chr10 21940602 + Exonic hg19 LAML TCGA-AB-2849_61660AAXX_5 9 15 In-Frame Inter-chr q14.2 p12.31 Oncogene KB Pub Seq+ 31746 ChimerSeq STARFusion TCGA_RNA-Seq MLLT10-PICALM MLLT10 chr10 21906136 + PICALM chr11 85670103 - Exonic hg19 LAML TCGA-AB-2849_61660AAXX_5 8 6 In-Frame Inter-chr p12.31 Oncogene q14.2 KB Pub Seq+ 31747 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74315749 + RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2823_61U24AAXX_2 11 24 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31748 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PML RARA chr17 38487648 + PML chr15 74317198 + Exonic hg19 LAML TCGA-AB-2823_61U24AAXX_2 9 23 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 31749 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PML RARA chr17 38487648 + PML chr15 74326819 + Exonic hg19 LAML TCGA-AB-2841_631WGAAXX_3 12 20 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 31750 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PML RARA chr17 38499119 + PML chr15 74326819 + Exonic hg19 LAML TCGA-AB-2841_631WGAAXX_3 2 20 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 31751 ChimerSeq STARFusion TCGA_RNA-Seq CHD1-MTOR CHD1 chr5 98199112 - MTOR chr1 11273623 - Exonic hg19 LAML TCGA-AB-2939_61FFWAAXX_7 15 13 Out-of-frame Inter-chr q21.1 Tumor suppressor gene p36.22 Oncogene Seq+ 31752 ChimerSeq STARFusion TCGA_RNA-Seq CHD1-MTOR CHD1 chr5 98204199 - MTOR chr1 11273623 - Exonic hg19 LAML TCGA-AB-2939_61FFWAAXX_7 2 13 In-Frame Inter-chr q21.1 Tumor suppressor gene p36.22 Oncogene Seq+ 31753 ChimerSeq STARFusion TCGA_RNA-Seq CDC73-FAM172A CDC73 chr1 193121574 + FAM172A chr5 92956835 - Exonic hg19 LAML TCGA-AB-2939_61FFWAAXX_7 2 9 Out-of-frame Inter-chr q31.2 Oncogene Tumor suppressor gene q15 Tumor suppressor gene Seq+ 31754 ChimerSeq STARFusion TCGA_RNA-Seq BZW2-GUSB BZW2 chr7 16714213 + GUSB chr7 65432894 - Exonic hg19 LAML TCGA-AB-2939_61FFWAAXX_7 2 2 Out-of-frame Intra-chr p21.1 q11.21 Seq+ 31755 ChimerSeq STARFusion TCGA_RNA-Seq BZW2-GUSB BZW2 chr7 16714213 + GUSB chr7 65435353 - Exonic hg19 LAML TCGA-AB-2939_61FFWAAXX_7 2 2 Out-of-frame Intra-chr p21.1 q11.21 Seq+ 31756 ChimerSeq STARFusion TCGA_RNA-Seq PML-RARA PML chr15 74315749 + RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-3007_616EAAAXX_3 6 36 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 31757 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PML RARA chr17 38487648 + PML chr15 74317198 + Exonic hg19 LAML TCGA-AB-3007_616EAAAXX_3 3 13 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 31758 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-ASAP1 PVT1 chr8 128903244 + ASAP1 chr8 131127981 - Exonic hg19 LAML TCGA-AB-2876_6165CAAXX_1 21 102 5'UTR-CDS Intra-chr q24.21 q24.22 31759 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LAML TCGA-AB-2942_61LP1AAXX_6 3 12 In-Frame Intra-chr p13.3 p13.3 31760 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 + MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2942_61LP1AAXX_6 4 5 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 31761 ChimerSeq STARFusion TCGA_RNA-Seq KMT2A-ELL KMT2A chr11 118353210 + ELL chr19 18576728 - Exonic hg19 LAML TCGA-AB-2834_61660AAXX_3 3 11 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor p13.11 KB Pub Seq+ 31762 ChimerSeq STARFusion TCGA_RNA-Seq NSD1-NUP98 NSD1 chr5 176639196 + NUP98 chr11 3756554 - Exonic hg19 LAML TCGA-AB-2856_7008LAAXX_3 3 12 In-Frame Inter-chr q35.3 Oncogene p15.4 Oncogene Tumor suppressor gene KB Pub Seq+ 31763 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LAML TCGA-AB-2978_61GAEAAXX_7 2 3 In-Frame Intra-chr p13.3 p13.3 31764 ChimerSeq STARFusion TCGA_RNA-Seq SRPR-DISC1FP1 SRPR chr11 126137444 - DISC1FP1 chr11 90279922 + Exonic hg19 LAML TCGA-AB-2838_700H2AAXX_1 7 13 Out-of-frame Intra-chr q14.3 31765 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSD1 PRSS27 chr16 2763530 - TPSD1 chr16 1308333 + Exonic hg19 LAML TCGA-AB-2838_700H2AAXX_1 5 7 In-Frame Intra-chr p13.3 p13.3 31766 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-PIP5K1P1 KCTD20 chr6 36457999 + PIP5K1P1 chr6 7987766 + Exonic hg19 LGG TCGA-DH-A7UR 23 0 Out-of-frame Intra-chr p21.31 p24.3 31767 ChimerSeq STARFusion TCGA_RNA-Seq PLXDC2-C10orf112 PLXDC2 chr10 20106120 + C10orf112 chr10 19856431 + Exonic hg19 LGG TCGA-DU-5847 6 8 Out-of-frame Intra-chr p12.31 Seq+ 31768 ChimerSeq STARFusion TCGA_RNA-Seq SNX15-C11orf85 SNX15 chr11 64795108 + C11orf85 chr11 64708118 - Exonic hg19 LGG TCGA-HT-7686 36 106 Out-of-frame Intra-chr q13.1 Seq+ 31769 ChimerSeq STARFusion TCGA_RNA-Seq MICAL3-FXYD6 MICAL3 chr22 18484159 - FXYD6 chr11 117713496 - Exonic hg19 LGG TCGA-HT-7686 18 140 5'UTR-5'UTR Inter-chr q11.21 q23.3 Seq+ 31770 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-SLC35F2 TNRC6B chr22 40574144 + SLC35F2 chr11 107686691 - Exonic hg19 LGG TCGA-HT-7686 18 108 In-Frame Inter-chr q13.1 q22.3 Seq+ 31771 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-SLC35F2 TNRC6B chr22 40552186 + SLC35F2 chr11 107686691 - Exonic hg19 LGG TCGA-HT-7686 18 107 In-Frame Inter-chr q13.1 q22.3 Seq+ 31772 ChimerSeq STARFusion TCGA_RNA-Seq EWSR1-NCAPH2 EWSR1 chr22 29678546 + NCAPH2 chr22 50954876 + Exonic hg19 LGG TCGA-HT-7686 6 41 Out-of-frame Intra-chr q12.2 q13.33 Seq+ 31773 ChimerSeq STARFusion TCGA_RNA-Seq PCNXL3-C11orf80 PCNXL3 chr11 65398075 + C11orf80 chr11 66610320 + Exonic hg19 LGG TCGA-HT-7686 3 46 Out-of-frame Intra-chr q13.2 Seq+ 31774 ChimerSeq STARFusion TCGA_RNA-Seq PCNXL3-RCE1 PCNXL3 chr11 65398075 + RCE1 chr11 66610320 + Exonic hg19 LGG TCGA-HT-7686 3 46 CDS-5'UTR Intra-chr q13.2 31775 ChimerSeq STARFusion TCGA_RNA-Seq FXYD6-OSBP2 FXYD6 chr11 117747307 - OSBP2 chr22 31266416 + Exonic hg19 LGG TCGA-HT-7686 4 25 5'UTR-CDS Inter-chr q23.3 q12.2 Seq+ 31776 ChimerSeq STARFusion TCGA_RNA-Seq EHD1-ADRBK2 EHD1 chr11 64627396 - ADRBK2 chr22 26057543 + Exonic hg19 LGG TCGA-HT-7686 4 12 In-Frame Inter-chr q13.1 Seq+ 31777 ChimerSeq STARFusion TCGA_RNA-Seq C22orf39-ZBTB16 C22orf39 chr22 19384310 - ZBTB16 chr11 114027059 + Exonic hg19 LGG TCGA-HT-7686 3 6 3'UTR-CDS Inter-chr q11.21 q23.2 Tumor suppressor gene Transcription factor Seq+ 31778 ChimerSeq STARFusion TCGA_RNA-Seq HIRA-ZBTB16 HIRA chr22 19384310 - ZBTB16 chr11 114027059 + Exonic hg19 LGG TCGA-HT-7686 3 6 Out-of-frame Inter-chr q11.21 Tumor suppressor gene q23.2 Tumor suppressor gene Transcription factor Seq+ 31779 ChimerSeq STARFusion TCGA_RNA-Seq DDX6-TSPAN18 DDX6 chr11 118627880 - TSPAN18 chr11 44927958 + Exonic hg19 LGG TCGA-HT-7686 2 8 CDS-5'UTR Intra-chr q23.3 p11.2 Seq+ 31780 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-KBTBD11 CPSF6 chr12 69656342 + KBTBD11 chr8 1954711 + Exonic hg19 LGG TCGA-HT-7684 3 4 3'UTR-3'UTR Inter-chr q15 31781 ChimerSeq STARFusion TCGA_RNA-Seq AFAP1-NTRK2 AFAP1 chr4 7780489 - NTRK2 chr9 87356807 + Exonic hg19 LGG TCGA-HT-7680 23 147 In-Frame Inter-chr p16.1 q21.33 Oncogene Seq+ 31782 ChimerSeq STARFusion TCGA_RNA-Seq CST3-GFAP CST3 chr20 23618371 - GFAP chr17 42983740 - Exonic hg19 LGG TCGA-HT-7680 4 43 Out-of-frame Inter-chr p11.21 q21.31 31783 ChimerSeq STARFusion TCGA_RNA-Seq NTRK2-AFAP1 NTRK2 chr9 87342874 + AFAP1 chr4 7776630 - Exonic hg19 LGG TCGA-HT-7680 8 16 In-Frame Inter-chr q21.33 Oncogene p16.1 Seq+ 31784 ChimerSeq STARFusion TCGA_RNA-Seq NRXN2-APOE NRXN2 chr11 64391039 - APOE chr19 45411017 + Exonic hg19 LGG TCGA-HT-7681 5 1 Out-of-frame Inter-chr q13.1 q13.32 31785 ChimerSeq STARFusion TCGA_RNA-Seq QKI-AKAP7 QKI chr6 163983101 + AKAP7 chr6 131602670 + Exonic hg19 LGG TCGA-HT-7689 2 32 In-Frame Intra-chr q26 q23.2 Seq+ 31786 ChimerSeq STARFusion TCGA_RNA-Seq QKI-AKAP7 QKI chr6 163983101 + AKAP7 chr6 131603539 + Exonic hg19 LGG TCGA-HT-7689 2 32 CDS-3'UTR Intra-chr q26 q23.2 Seq+ 31787 ChimerSeq STARFusion TCGA_RNA-Seq VKORC1-CCDC101 VKORC1 chr16 31105878 - CCDC101 chr16 28592376 + Exonic hg19 LGG TCGA-HT-7689 2 21 CDS-5'UTR Intra-chr p11.2 31788 ChimerSeq STARFusion TCGA_RNA-Seq SNRPN-CYFIP1 SNRPN chr15 25101863 + CYFIP1 chr15 22939175 + Exonic hg19 LGG TCGA-KT-A7W1 13 21 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 31789 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-GOLGA6L2 CREBBP chr16 3900298 - GOLGA6L2 chr15 23690585 - Exonic hg19 LGG TCGA-KT-A7W1 9 17 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene q11.2 Seq+ 31790 ChimerSeq STARFusion TCGA_RNA-Seq EPHB2-PDZD4 EPHB2 chr1 23111569 + PDZD4 chrX 153074050 - Exonic hg19 LGG TCGA-KT-A7W1 6 29 Out-of-frame Inter-chr p36.12 Tumor suppressor gene q28 Seq+ 31791 ChimerSeq STARFusion TCGA_RNA-Seq KIF26B-FMN2 KIF26B chr1 245852109 + FMN2 chr1 240286479 + Exonic hg19 LGG TCGA-KT-A7W1 5 29 In-Frame Intra-chr q43 Seq+ 31792 ChimerSeq STARFusion TCGA_RNA-Seq RAP1GAP-NSDHL RAP1GAP chr1 21976254 - NSDHL chrX 152027314 + Exonic hg19 LGG TCGA-KT-A7W1 5 18 Out-of-frame Inter-chr p36.12 Tumor suppressor gene q28 Seq+ 31793 ChimerSeq STARFusion TCGA_RNA-Seq CNST-RAP1GAP CNST chr1 246729965 + RAP1GAP chr1 21952890 - Exonic hg19 LGG TCGA-KT-A7W1 2 25 5'UTR-5'UTR Intra-chr q44 p36.12 Tumor suppressor gene Seq+ 31794 ChimerSeq STARFusion TCGA_RNA-Seq GLG1-CFDP1 GLG1 chr16 74640555 - CFDP1 chr16 75327940 - Exonic hg19 LGG TCGA-DU-6542 7 52 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 31795 ChimerSeq STARFusion TCGA_RNA-Seq SDE2-C1orf110 SDE2 chr1 226186894 - C1orf110 chr1 162829448 - Exonic hg19 LGG TCGA-DU-6542 5 18 Out-of-frame Intra-chr q42.12 31796 ChimerSeq STARFusion TCGA_RNA-Seq RYR2-WLS RYR2 chr1 237205869 + WLS chr1 68659910 - Exonic hg19 LGG TCGA-DU-6542 7 3 5'UTR-CDS Intra-chr q43 p31.3 Seq+ 31797 ChimerSeq STARFusion TCGA_RNA-Seq KDM5B-UAP1 KDM5B chr1 202777230 - UAP1 chr1 162535802 + Exonic hg19 LGG TCGA-DU-6542 3 9 CDS-5'UTR Intra-chr q32.1 Transcription factor q23.3 Seq+ 31798 ChimerSeq STARFusion TCGA_RNA-Seq NMNAT2-ATF6 NMNAT2 chr1 183387318 - ATF6 chr1 161748034 + Exonic hg19 LGG TCGA-DU-6542 2 9 In-Frame Intra-chr q25.3 q23.3 Transcription factor Seq+ 31799 ChimerSeq STARFusion TCGA_RNA-Seq IQCK-ATP2A1 IQCK chr16 19881722 + ATP2A1 chr16 28914644 + Exonic hg19 LGG TCGA-HT-7611 7 19 3'UTR-CDS Intra-chr p12.3 p11.2 31800 ChimerSeq STARFusion TCGA_RNA-Seq HCFC2-ANKS1B HCFC2 chr12 104492258 + ANKS1B chr12 99640642 - Exonic hg19 LGG TCGA-HT-7611 2 7 Out-of-frame Intra-chr q23.3 q23.1 Seq+ 31801 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 LGG TCGA-HT-7882 21 0 Out-of-frame Inter-chr q13.33 p21.1 31802 ChimerSeq STARFusion TCGA_RNA-Seq GLIS3-KIAA0020 GLIS3 chr9 4286038 - KIAA0020 chr9 2838517 - Exonic hg19 LGG TCGA-HT-7882 3 29 CDS-5'UTR Intra-chr p24.2 Transcription factor Seq+ 31803 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1-CPLX1 WHSC1 chr4 1920350 + CPLX1 chr4 786396 - Exonic hg19 LGG TCGA-DH-A669 34 155 Out-of-frame Intra-chr Oncogene p16.3 Seq+ 31804 ChimerSeq STARFusion TCGA_RNA-Seq PARD3-LYAR PARD3 chr10 35103804 - LYAR chr4 4276496 - Exonic hg19 LGG TCGA-DH-A669 23 81 In-Frame Inter-chr p11.21 p16.3 Seq+ 31805 ChimerSeq STARFusion TCGA_RNA-Seq AFAP1-AKR1C1 AFAP1 chr4 7774547 - AKR1C1 chr10 4975429 + Exonic hg19 LGG TCGA-DH-A669 4 19 CDS-5'UTR Inter-chr p16.1 p15.1 Seq+ 31806 ChimerSeq STARFusion TCGA_RNA-Seq ZMYND11-SORBS2 ZMYND11 chr10 293406 + SORBS2 chr4 186515089 - Exonic hg19 LGG TCGA-DH-A669 3 14 In-Frame Inter-chr p15.3 Tumor suppressor gene q35.1 Seq+ 31807 ChimerSeq STARFusion TCGA_RNA-Seq RASA3-KCNG2 RASA3 chr13 114817527 - KCNG2 chr18 77659040 + Exonic hg19 LGG TCGA-FG-A711 16 28 Out-of-frame Inter-chr q23 Seq+ 31808 ChimerSeq STARFusion TCGA_RNA-Seq RBFA-XRCC5 RBFA chr18 77802219 + XRCC5 chr2 217054948 + Exonic hg19 LGG TCGA-FG-A711 4 7 Out-of-frame Inter-chr q23 q35 Tumor suppressor gene Seq+ 31809 ChimerSeq STARFusion TCGA_RNA-Seq RBFA-XRCC5 RBFA chr18 77794653 + XRCC5 chr2 217054948 + Exonic hg19 LGG TCGA-FG-A711 2 7 Out-of-frame Inter-chr q23 q35 Tumor suppressor gene Seq+ 31810 ChimerSeq STARFusion TCGA_RNA-Seq B3GALT5-IGSF5 B3GALT5 chr21 40977152 + IGSF5 chr21 41137462 + Exonic hg19 LGG TCGA-FG-A711 2 5 5'UTR-CDS Intra-chr q22.2 q22.2 31811 ChimerSeq STARFusion TCGA_RNA-Seq MED16-PALM MED16 chr19 893086 - PALM chr19 746285 + Exonic hg19 LGG TCGA-FG-A710 3 19 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 31812 ChimerSeq STARFusion TCGA_RNA-Seq RNF126-MED16 RNF126 chr19 663047 - MED16 chr19 891149 - Exonic hg19 LGG TCGA-FG-A710 2 8 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 31813 ChimerSeq STARFusion TCGA_RNA-Seq LARP1-MAFF LARP1 chr5 154135753 + MAFF chr22 38609830 + Exonic hg19 LGG TCGA-E1-A7Z4 30 97 CDS-5'UTR Inter-chr q33.2 q13.1 Transcription factor Seq+ 31814 ChimerSeq STARFusion TCGA_RNA-Seq RSPO1-GFAP RSPO1 chr1 38077388 - GFAP chr17 42983731 - Exonic hg19 LGG TCGA-E1-A7Z4 3 6 Out-of-frame Inter-chr p34.3 q21.31 31815 ChimerSeq STARFusion TCGA_RNA-Seq PCID2-SNRPA PCID2 chr13 113862913 - SNRPA chr19 41265336 + Exonic hg19 LGG TCGA-E1-A7Z2 55 111 In-Frame Inter-chr q34 q13.2 Seq+ 31816 ChimerSeq STARFusion TCGA_RNA-Seq AKT2-ZNF576 AKT2 chr19 40771129 - ZNF576 chr19 44101246 + Exonic hg19 LGG TCGA-E1-A7Z2 11 34 CDS-5'UTR Intra-chr q13.2 AGC:Akt Oncogene q13.31 Transcription factor Seq+ 31817 ChimerSeq STARFusion TCGA_RNA-Seq AKT2-SRRM5 AKT2 chr19 40771129 - SRRM5 chr19 44101246 + Exonic hg19 LGG TCGA-E1-A7Z2 11 30 CDS-5'UTR Intra-chr q13.2 AGC:Akt Oncogene q13.31 Seq+ 31818 ChimerSeq STARFusion TCGA_RNA-Seq KPNA6-TMEM39B KPNA6 chr1 32573735 + TMEM39B chr1 32557276 + Exonic hg19 LGG TCGA-E1-A7Z2 11 17 Out-of-frame Intra-chr p35.2 p35.2 Seq+ 31819 ChimerSeq STARFusion TCGA_RNA-Seq PMS2-DNAH11 PMS2 chr7 6048628 - DNAH11 chr7 21813384 + Exonic hg19 LGG TCGA-E1-A7Z2 10 17 Out-of-frame Intra-chr p22.1 Oncogene p15.3 Seq+ 31820 ChimerSeq STARFusion TCGA_RNA-Seq AKT2-ZNF576 AKT2 chr19 40771129 - ZNF576 chr19 44101249 + Exonic hg19 LGG TCGA-E1-A7Z2 3 34 CDS-5'UTR Intra-chr q13.2 AGC:Akt Oncogene q13.31 Transcription factor Seq+ 31821 ChimerSeq STARFusion TCGA_RNA-Seq RAB40C-PTRH1 RAB40C chr16 668260 + PTRH1 chr9 130457420 - Exonic hg19 LGG TCGA-E1-A7Z2 4 29 CDS-3'UTR Inter-chr p13.3 q34.11 Seq+ 31822 ChimerSeq STARFusion TCGA_RNA-Seq AKT2-SRRM5 AKT2 chr19 40771129 - SRRM5 chr19 44101249 + Exonic hg19 LGG TCGA-E1-A7Z2 3 30 CDS-5'UTR Intra-chr q13.2 AGC:Akt Oncogene q13.31 Seq+ 31823 ChimerSeq STARFusion TCGA_RNA-Seq MAML2-ATG13 MAML2 chr11 95825056 - ATG13 chr11 46665829 + Exonic hg19 LGG TCGA-E1-A7Z2 4 15 CDS-5'UTR Intra-chr q21 Oncogene p11.2 Seq+ 31824 ChimerSeq STARFusion TCGA_RNA-Seq NUMBL-CYP2F1 NUMBL chr19 41192816 - CYP2F1 chr19 41626308 + Exonic hg19 LGG TCGA-E1-A7Z2 3 16 In-Frame Intra-chr q13.2 q13.2 Seq+ 31825 ChimerSeq STARFusion TCGA_RNA-Seq NUMBL-CYP2F1 NUMBL chr19 41196365 - CYP2F1 chr19 41627862 + Exonic hg19 LGG TCGA-E1-A7Z2 3 14 In-Frame Intra-chr q13.2 q13.2 Seq+ 31826 ChimerSeq STARFusion TCGA_RNA-Seq MAML2-ATG13 MAML2 chr11 95825056 - ATG13 chr11 46666889 + Exonic hg19 LGG TCGA-E1-A7Z2 2 15 In-Frame Intra-chr q21 Oncogene p11.2 Seq+ 31827 ChimerSeq STARFusion TCGA_RNA-Seq ATG16L1-NGEF ATG16L1 chr2 234202003 + NGEF chr2 233785295 - Exonic hg19 LGG TCGA-E1-A7Z2 4 4 Out-of-frame Intra-chr q37.1 Seq+ 31828 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK1-GLCCI1 EIF2AK1 chr7 6064340 - GLCCI1 chr7 8124527 + Exonic hg19 LGG TCGA-E1-A7Z2 4 4 Out-of-frame Intra-chr p22.1 p21.3 Seq+ 31829 ChimerSeq STARFusion TCGA_RNA-Seq TCHH-GFAP TCHH chr1 152084650 - GFAP chr17 42988823 - Exonic hg19 LGG TCGA-S9-A6U6 6 1 Out-of-frame Inter-chr q21.3 q21.31 31830 ChimerSeq STARFusion TCGA_RNA-Seq PHLPP1-ADAMTS13 PHLPP1 chr18 60384492 + ADAMTS13 chr9 136288221 + Exonic hg19 LGG TCGA-S9-A7J0 2 12 Out-of-frame Inter-chr q21.33 Tumor suppressor gene Seq+ 31831 ChimerSeq STARFusion TCGA_RNA-Seq NOVA1-FUS NOVA1 chr14 27064616 - FUS chr16 31199646 + Exonic hg19 LGG TCGA-S9-A7J0 3 6 In-Frame Inter-chr q12 p11.2 Tumor suppressor gene 31832 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K10-SUPT5H MAP3K10 chr19 40712064 + SUPT5H chr19 39948315 + Exonic hg19 LGG TCGA-S9-A6U0 11 24 In-Frame Intra-chr q13.2 q13.2 Seq+ 31833 ChimerSeq STARFusion TCGA_RNA-Seq CTSA-GFAP CTSA chr20 44526761 + GFAP chr17 42983880 - Exonic hg19 LGG TCGA-S9-A6U0 3 3 Out-of-frame Inter-chr q13.12 q21.31 31834 ChimerSeq STARFusion TCGA_RNA-Seq KRT8P1-GFAP KRT8P1 chr14 39197438 + GFAP chr17 42988025 - Exonic hg19 LGG TCGA-S9-A6U8 11 2 Out-of-frame Inter-chr q21.1 q21.31 31835 ChimerSeq STARFusion TCGA_RNA-Seq MLLT3-TYRP1 MLLT3 chr9 20456702 - TYRP1 chr9 12693912 + Exonic hg19 LGG TCGA-VM-A8C8 3 14 CDS-5'UTR Intra-chr p21.3 p23 Seq+ 31836 ChimerSeq STARFusion TCGA_RNA-Seq CCDC127-SDHA CCDC127 chr5 216844 - SDHA chr5 233592 + Exonic hg19 LGG TCGA-S9-A6UA 45 176 In-Frame Intra-chr p15.33 p15.33 Oncogene Tumor suppressor gene Seq+ 31837 ChimerSeq STARFusion TCGA_RNA-Seq MOB3B-SLC24A2 MOB3B chr9 27529553 - SLC24A2 chr9 19622297 - Exonic hg19 LGG TCGA-S9-A6UA 4 7 5'UTR-CDS Intra-chr p21.2 p22.1 Seq+ 31838 ChimerSeq STARFusion TCGA_RNA-Seq COPS7A-GNB3 COPS7A chr12 6839986 + GNB3 chr12 6954750 + Exonic hg19 LGG TCGA-S9-A6UA 2 13 Out-of-frame Intra-chr p13.31 p13.31 Seq+ 31839 ChimerSeq STARFusion TCGA_RNA-Seq SPIDR-COX6B1 SPIDR chr8 48613052 + COX6B1 chr19 36149496 + Exonic hg19 LGG TCGA-FG-5965 6 64 Out-of-frame Inter-chr q11.21 q13.12 31840 ChimerSeq STARFusion TCGA_RNA-Seq SGCB-TXLNA SGCB chr4 52904393 - TXLNA chr1 32655656 + Exonic hg19 LGG TCGA-FG-5965 6 10 In-Frame Inter-chr q12 p35.2 Seq+ 31841 ChimerSeq STARFusion TCGA_RNA-Seq SMURF1-GJC3 SMURF1 chr7 98741349 - GJC3 chr7 99521226 - Exonic hg19 LGG TCGA-FG-5963 44 98 In-Frame Intra-chr q22.1 Seq+ 31842 ChimerSeq STARFusion TCGA_RNA-Seq SMURF1-GJC3 SMURF1 chr7 98741349 - GJC3 chr7 99527244 - Exonic hg19 LGG TCGA-FG-5963 5 97 CDS-5'UTR Intra-chr q22.1 Seq+ 31843 ChimerSeq STARFusion TCGA_RNA-Seq NCKAP5-DYNC2H1 NCKAP5 chr2 133971288 - DYNC2H1 chr11 103306671 + Exonic hg19 LGG TCGA-FG-5963 9 21 In-Frame Inter-chr q21.2 q22.3 Seq+ 31844 ChimerSeq STARFusion TCGA_RNA-Seq SOX6-PTPRJ SOX6 chr11 16362558 - PTPRJ chr11 48134299 + Exonic hg19 LGG TCGA-FG-5963 10 11 Out-of-frame Intra-chr p15.2 Transcription factor p11.2 Tumor suppressor gene Seq+ 31845 ChimerSeq STARFusion TCGA_RNA-Seq DTX4-ABTB2 DTX4 chr11 58972219 + ABTB2 chr11 34226236 - Exonic hg19 LGG TCGA-FG-5963 5 26 Out-of-frame Intra-chr q12.1 p13 Seq+ 31846 ChimerSeq STARFusion TCGA_RNA-Seq MPPED2-AMOTL1 MPPED2 chr11 30601793 - AMOTL1 chr11 94554696 + Exonic hg19 LGG TCGA-FG-5963 8 8 In-Frame Intra-chr p14.1 q21 Seq+ 31847 ChimerSeq STARFusion TCGA_RNA-Seq DMTF1-SEMA3D DMTF1 chr7 86800405 + SEMA3D chr7 84702397 - Exonic hg19 LGG TCGA-FG-5963 3 14 In-Frame Intra-chr q21.12 Tumor suppressor gene Transcription factor q21.11 Seq+ 31848 ChimerSeq STARFusion TCGA_RNA-Seq AMOTL1-CCDC88B AMOTL1 chr11 94587247 + CCDC88B chr11 64119602 + Exonic hg19 LGG TCGA-FG-5963 2 17 In-Frame Intra-chr q21 q13.1 Seq+ 31849 ChimerSeq STARFusion TCGA_RNA-Seq AMOTL1-CCDC88B AMOTL1 chr11 94587247 + CCDC88B chr11 64118948 + Exonic hg19 LGG TCGA-FG-5963 2 17 In-Frame Intra-chr q21 q13.1 Seq+ 31850 ChimerSeq STARFusion TCGA_RNA-Seq GLI3-TMEM243 GLI3 chr7 42063067 - TMEM243 chr7 86828373 - Exonic hg19 LGG TCGA-FG-5963 5 4 Out-of-frame Intra-chr p14.1 Transcription factor q21.12 Seq+ 31851 ChimerSeq STARFusion TCGA_RNA-Seq TMEM135-GPD1L TMEM135 chr11 86749228 + GPD1L chr3 32169568 + Exonic hg19 LGG TCGA-FG-5963 4 8 Out-of-frame Inter-chr q14.2 p22.3 Seq+ 31852 ChimerSeq STARFusion TCGA_RNA-Seq CKAP5-TMEM135 CKAP5 chr11 46797805 - TMEM135 chr11 86778736 + Exonic hg19 LGG TCGA-FG-5963 2 12 In-Frame Intra-chr p11.2 q14.2 Seq+ 31853 ChimerSeq STARFusion TCGA_RNA-Seq GLB1-INSC GLB1 chr3 33109722 - INSC chr11 15260465 + Exonic hg19 LGG TCGA-FG-5963 2 9 In-Frame Inter-chr p22.3 p15.2 Seq+ 31854 ChimerSeq STARFusion TCGA_RNA-Seq HARBI1-TNS3 HARBI1 chr11 46637118 - TNS3 chr7 47344601 - Exonic hg19 LGG TCGA-FG-5963 2 9 In-Frame Inter-chr p11.2 p12.3 Seq+ 31855 ChimerSeq STARFusion TCGA_RNA-Seq FGF12-LAMP3 FGF12 chr3 192444970 - LAMP3 chr3 182872179 - Exonic hg19 LGG TCGA-FG-5963 2 8 In-Frame Intra-chr q29 q27.1 Seq+ 31856 ChimerSeq STARFusion TCGA_RNA-Seq SCN8A-ATF1 SCN8A chr12 52184286 + ATF1 chr12 51189692 + Exonic hg19 LGG TCGA-DH-A66G 7 6 In-Frame Intra-chr q13.13 q13.12 Oncogene Transcription factor Seq+ 31857 ChimerSeq STARFusion TCGA_RNA-Seq PABPC1-KHDRBS3 PABPC1 chr8 101724880 - KHDRBS3 chr8 136554897 + Exonic hg19 LGG TCGA-DH-A66G 2 5 In-Frame Intra-chr q22.3 q24.23 Seq+ 31858 ChimerSeq STARFusion TCGA_RNA-Seq KRT8P1-GFAP KRT8P1 chr14 39197440 + GFAP chr17 42988023 - Exonic hg19 LGG TCGA-DH-A66D 13 8 Out-of-frame Inter-chr q21.1 q21.31 31859 ChimerSeq STARFusion TCGA_RNA-Seq PAK6-EEF2 PAK6 chr15 40531758 + EEF2 chr19 3982056 - Exonic hg19 LGG TCGA-DH-A66D 11 1 Out-of-frame Inter-chr q15.1 STE:STE20 p13.3 31860 ChimerSeq STARFusion TCGA_RNA-Seq SPARC-SLC1A4 SPARC chr5 151047030 - SLC1A4 chr2 65250140 + Exonic hg19 LGG TCGA-DH-A66D 11 1 Out-of-frame Inter-chr q33.1 Tumor suppressor gene p14 31861 ChimerSeq STARFusion TCGA_RNA-Seq DENND1A-ASTN2 DENND1A chr9 126319849 - ASTN2 chr9 119188367 - Exonic hg19 LGG TCGA-DH-A66B 12 36 Out-of-frame Intra-chr q33.3 q33.1 Seq+ 31862 ChimerSeq STARFusion TCGA_RNA-Seq KRT8P1-GFAP KRT8P1 chr14 39197438 + GFAP chr17 42988025 - Exonic hg19 LGG TCGA-DH-A66B 7 3 Out-of-frame Inter-chr q21.1 q21.31 31863 ChimerSeq STARFusion TCGA_RNA-Seq PICALM-PPME1 PICALM chr11 85779693 - PPME1 chr11 73914773 + Exonic hg19 LGG TCGA-DU-A7T6 7 33 Out-of-frame Intra-chr q14.2 q13.4 Seq+ 31864 ChimerSeq STARFusion TCGA_RNA-Seq CAPRIN1-C11orf84 CAPRIN1 chr11 34113603 + C11orf84 chr11 63585277 + Exonic hg19 LGG TCGA-DU-A7T6 8 25 In-Frame Intra-chr p13 q13.1 Seq+ 31865 ChimerSeq STARFusion TCGA_RNA-Seq CEP164-BACE1 CEP164 chr11 117206396 + BACE1 chr11 117166063 - Exonic hg19 LGG TCGA-DU-A7T6 4 10 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 31866 ChimerSeq STARFusion TCGA_RNA-Seq SUZ12P-LRRC37BP1 SUZ12P chr17 29096983 + LRRC37BP1 chr17 28956698 + Exonic hg19 LGG TCGA-DU-5874 9 44 Out-of-frame Intra-chr q11.2 31867 ChimerSeq STARFusion TCGA_RNA-Seq SUZ12P-LRRC37BP1 SUZ12P chr17 29096983 + LRRC37BP1 chr17 28958773 + Exonic hg19 LGG TCGA-DU-5874 6 26 Out-of-frame Intra-chr q11.2 31868 ChimerSeq STARFusion TCGA_RNA-Seq HMGB1P4-LMOD3 HMGB1P4 chr2 171458173 - LMOD3 chr3 69169077 - Exonic hg19 LGG TCGA-DU-5874 3 16 Out-of-frame Inter-chr q31.1 p14.1 31869 ChimerSeq STARFusion TCGA_RNA-Seq TMEM87A-MRPL33 TMEM87A chr15 42553156 - MRPL33 chr2 28005439 + Exonic hg19 LGG TCGA-DU-5870 11 22 CDS-3'UTR Inter-chr q15.1 p23.2 31870 ChimerSeq STARFusion TCGA_RNA-Seq MARCH8-DEFB119 2019_ 3_ 8_ chr10 46089683 - DEFB119 chr20 29966194 - Exonic hg19 LGG TCGA-DU-5871 2 11 Out-of-frame Inter-chr q11.21 Seq+ 31871 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT3-PRY AGPAT3 chr21 45323900 + PRY chrY 24650356 + Exonic hg19 LGG TCGA-DU-A7T8 2 13 5'UTR-CDS Inter-chr q22.3 q11.223 Seq+ 31872 ChimerSeq STARFusion TCGA_RNA-Seq FASTK-GNGT1 FASTK chr7 150774397 - GNGT1 chr7 93540102 + Exonic hg19 LGG TCGA-S9-A89Z 5 10 Out-of-frame Intra-chr q36.1 Atypical:FAST q21.3 Seq+ 31873 ChimerSeq STARFusion TCGA_RNA-Seq KIT-HOPX KIT chr4 55524248 + HOPX chr4 57522178 - Exonic hg19 LGG TCGA-S9-A89Z 2 7 Out-of-frame Intra-chr q12 TK:PDGFR Oncogene q12 Tumor suppressor gene Seq+ 31874 ChimerSeq STARFusion TCGA_RNA-Seq MET-CFTR MET chr7 116340338 + CFTR chr7 117355812 + Exonic hg19 LGG TCGA-HT-A61C 23 352 CDS-3'UTR Intra-chr q31.2 TK:Met Oncogene q31.2 Tumor suppressor gene 31875 ChimerSeq STARFusion TCGA_RNA-Seq MET-CFTR MET chr7 116312631 + CFTR chr7 117355812 + Exonic hg19 LGG TCGA-HT-A61C 17 352 5'UTR-3'UTR Intra-chr q31.2 TK:Met Oncogene q31.2 Tumor suppressor gene 31876 ChimerSeq STARFusion TCGA_RNA-Seq MET-CFTR MET chr7 116312631 + CFTR chr7 117352395 + Exonic hg19 LGG TCGA-HT-A61C 10 352 5'UTR-3'UTR Intra-chr q31.2 TK:Met Oncogene q31.2 Tumor suppressor gene 31877 ChimerSeq STARFusion TCGA_RNA-Seq WNT2-ASZ1 WNT2 chr7 116962961 - ASZ1 chr7 117066989 - Exonic hg19 LGG TCGA-HT-A61C 31 254 Out-of-frame Intra-chr q31.2 q31.2 Seq+ 31878 ChimerSeq STARFusion TCGA_RNA-Seq ST7-CFTR ST7 chr7 116593745 + CFTR chr7 117199518 + Exonic hg19 LGG TCGA-HT-A61C 25 185 Out-of-frame Intra-chr q31.2 Tumor suppressor gene q31.2 Tumor suppressor gene Seq+ 31879 ChimerSeq STARFusion TCGA_RNA-Seq ST7-CFTR ST7 chr7 116660683 + CFTR chr7 117199518 + Exonic hg19 LGG TCGA-HT-A61C 6 171 Out-of-frame Intra-chr q31.2 Tumor suppressor gene q31.2 Tumor suppressor gene Seq+ 31880 ChimerSeq STARFusion TCGA_RNA-Seq ASZ1-WNT2 ASZ1 chr7 117062291 - WNT2 chr7 116960847 - Exonic hg19 LGG TCGA-HT-A61C 3 36 Out-of-frame Intra-chr q31.2 q31.2 Seq+ 31881 ChimerSeq STARFusion TCGA_RNA-Seq CFTR-ASZ1 CFTR chr7 117251862 + ASZ1 chr7 117066989 - Exonic hg19 LGG TCGA-HT-A61C 2 14 Out-of-frame Intra-chr q31.2 Tumor suppressor gene q31.2 Seq+ 31882 ChimerSeq STARFusion TCGA_RNA-Seq ZNF175-CYP27B1 ZNF175 chr19 52085135 + CYP27B1 chr12 58158333 - Exonic hg19 LGG TCGA-DU-7010 85 481 Out-of-frame Inter-chr q13.41 Transcription factor q14.1 Seq+ 31883 ChimerSeq STARFusion TCGA_RNA-Seq BCAT2-IRF3 BCAT2 chr19 49314241 - IRF3 chr19 50166515 - Exonic hg19 LGG TCGA-DU-7010 101 166 Out-of-frame Intra-chr q13.33 q13.33 Tumor suppressor gene Transcription factor Seq+ 31884 ChimerSeq STARFusion TCGA_RNA-Seq BCAT2-IRF3 BCAT2 chr19 49302936 - IRF3 chr19 50166515 - Exonic hg19 LGG TCGA-DU-7010 13 164 Out-of-frame Intra-chr q13.33 q13.33 Tumor suppressor gene Transcription factor Seq+ 31885 ChimerSeq STARFusion TCGA_RNA-Seq AGAP2-TRAPPC6A AGAP2 chr12 58131967 - TRAPPC6A chr19 45670871 - Exonic hg19 LGG TCGA-DU-7010 23 44 Out-of-frame Inter-chr q14.1 q13.32 31886 ChimerSeq STARFusion TCGA_RNA-Seq ATG5-CEACAM16 ATG5 chr6 106763976 - CEACAM16 chr19 45206619 + Exonic hg19 LGG TCGA-DU-7010 8 57 Out-of-frame Inter-chr q21 q13.31 Seq+ 31887 ChimerSeq STARFusion TCGA_RNA-Seq ATG5-CEACAM16 ATG5 chr6 106763976 - CEACAM16 chr19 45204631 + Exonic hg19 LGG TCGA-DU-7010 2 57 CDS-5'UTR Inter-chr q21 q13.31 Seq+ 31888 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN31-GFAP TSPAN31 chr12 58142196 + GFAP chr17 42983741 - Exonic hg19 LGG TCGA-DU-7010 3 51 Out-of-frame Inter-chr q14.1 q21.31 31889 ChimerSeq STARFusion TCGA_RNA-Seq HLCS-YBEY HLCS chr21 38302551 - YBEY chr21 47711248 + Exonic hg19 LGG TCGA-DU-7010 4 22 In-Frame Intra-chr q22.13 q22.3 Seq+ 31890 ChimerSeq STARFusion TCGA_RNA-Seq BEND3-AIM1 BEND3 chr6 107419755 - AIM1 chr6 106989461 + Exonic hg19 LGG TCGA-DU-7010 3 12 In-Frame Intra-chr q21 Seq+ 31891 ChimerSeq STARFusion TCGA_RNA-Seq ZNF28-PPP1R37 ZNF28 chr19 53321197 - PPP1R37 chr19 45641772 + Exonic hg19 LGG TCGA-DU-7010 2 10 Out-of-frame Intra-chr q13.41 Transcription factor q13.32 31892 ChimerSeq STARFusion TCGA_RNA-Seq ZNF468-PPP1R37 ZNF468 chr19 53357511 - PPP1R37 chr19 45641772 + Exonic hg19 LGG TCGA-DU-7010 2 7 Out-of-frame Intra-chr q13.41 Transcription factor q13.32 31893 ChimerSeq STARFusion TCGA_RNA-Seq ZNF133-MS4A4A ZNF133 chr20 18269248 + MS4A4A chr11 60059698 + Exonic hg19 LGG TCGA-S9-A89V 6 12 5'UTR-5'UTR Inter-chr p11.23 Transcription factor q12.2 Seq+ 31894 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 LGG TCGA-S9-A89V 2 9 CDS-5'UTR Intra-chr q23 Seq+ 31895 ChimerSeq STARFusion TCGA_RNA-Seq ZNF37A-FAM188A ZNF37A chr10 38384732 + FAM188A chr10 15838171 - Exonic hg19 LGG TCGA-DU-A6S7 3 4 5'UTR-CDS Intra-chr p11.1 Transcription factor Tumor suppressor gene Seq+ 31896 ChimerSeq STARFusion TCGA_RNA-Seq SLC47A2-ALDH3A1 SLC47A2 chr17 19616016 - ALDH3A1 chr17 19646776 - Exonic hg19 LGG TCGA-HT-A617 14 60 In-Frame Intra-chr p11.2 p11.2 Seq+ 31897 ChimerSeq STARFusion TCGA_RNA-Seq EPHB1-BFSP2 EPHB1 chr3 134873118 + BFSP2 chr3 133166161 + Exonic hg19 LGG TCGA-HT-A617 5 28 In-Frame Intra-chr q22.2 Oncogene q22.1 Seq+ 31898 ChimerSeq STARFusion TCGA_RNA-Seq CLU-TESC CLU chr8 27455977 - TESC chr12 117536326 - Exonic hg19 LGG TCGA-HT-A617 5 1 3'UTR-3'UTR Inter-chr p21.1 Tumor suppressor gene q24.22 31899 ChimerSeq STARFusion TCGA_RNA-Seq PRKCA-LINC00963 PRKCA chr17 64302245 + LINC00963 chr9 132265602 + Exonic hg19 LGG TCGA-HT-A617 2 6 Out-of-frame Inter-chr q24.2 q34.11 31900 ChimerSeq STARFusion TCGA_RNA-Seq NRXN2-APOE NRXN2 chr11 64391039 - APOE chr19 45411017 + Exonic hg19 LGG TCGA-HT-A616 6 2 Out-of-frame Inter-chr q13.1 q13.32 31901 ChimerSeq STARFusion TCGA_RNA-Seq PRR16-SCAMP1 PRR16 chr5 119800340 + SCAMP1 chr5 77711344 + Exonic hg19 LGG TCGA-HT-A614 2 10 5'UTR-CDS Intra-chr q23.1 q14.1 Seq+ 31902 ChimerSeq STARFusion TCGA_RNA-Seq MSH3-RASGEF1C MSH3 chr5 79952350 + RASGEF1C chr5 179555610 - Exonic hg19 LGG TCGA-HT-A614 2 6 Out-of-frame Intra-chr q14.1 q35.3 Seq+ 31903 ChimerSeq STARFusion TCGA_RNA-Seq COQ6-FLRT1 COQ6 chr14 74417198 + FLRT1 chr11 63883691 + Exonic hg19 LGG TCGA-HT-A619 4 27 CDS-5'UTR Inter-chr q24.3 q13.1 Seq+ 31904 ChimerSeq STARFusion TCGA_RNA-Seq CYTH1-MACROD1 CYTH1 chr17 76694351 - MACROD1 chr11 63782753 - Exonic hg19 LGG TCGA-HT-A619 2 27 In-Frame Inter-chr q25.3 q13.1 Seq+ 31905 ChimerSeq STARFusion TCGA_RNA-Seq USP4-BBOX1 USP4 chr3 49329943 - BBOX1 chr11 27078748 + Exonic hg19 LGG TCGA-HT-A619 2 25 Out-of-frame Inter-chr p21.31 p14.2 Seq+ 31906 ChimerSeq STARFusion TCGA_RNA-Seq KRT8P1-GFAP KRT8P1 chr14 39197440 + GFAP chr17 42988023 - Exonic hg19 LGG TCGA-HT-A618 4 3 Out-of-frame Inter-chr q21.1 q21.31 31907 ChimerSeq STARFusion TCGA_RNA-Seq CREBRF-CSNK1A1 CREBRF chr5 172483482 + CSNK1A1 chr5 148899951 - Exonic hg19 LGG TCGA-HT-7860 3 19 5'UTR-CDS Intra-chr q35.1 q32 Tumor suppressor gene Seq+ 31908 ChimerSeq STARFusion TCGA_RNA-Seq HDAC1-LRRC42 HDAC1 chr1 32757819 + LRRC42 chr1 54412122 + Exonic hg19 LGG TCGA-HT-7860 2 9 CDS-5'UTR Intra-chr p35.2 Tumor suppressor gene p32.3 Seq+ 31909 ChimerSeq STARFusion TCGA_RNA-Seq OS9-KIF5A OS9 chr12 58088709 + KIF5A chr12 57960909 + Exonic hg19 LGG TCGA-DU-7013 11 69 In-Frame Intra-chr q13.3 q13.3 Seq+ 31910 ChimerSeq STARFusion TCGA_RNA-Seq AVIL-MBD6 AVIL chr12 58207935 - MBD6 chr12 57921631 + Exonic hg19 LGG TCGA-DU-7013 8 28 Out-of-frame Intra-chr q14.1 q13.3 Transcription factor Seq+ 31911 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH1-SDCCAG3 NOTCH1 chr9 139402407 - SDCCAG3 chr9 139300430 - Exonic hg19 LGG TCGA-DU-7014 5 29 In-Frame Intra-chr q34.3 Oncogene Tumor suppressor gene q34.3 Seq+ 31912 ChimerSeq STARFusion TCGA_RNA-Seq KIAA2026-CMTM7 KIAA2026 chr9 6007195 - CMTM7 chr3 32483332 + Exonic hg19 LGG TCGA-DU-7014 6 21 Out-of-frame Inter-chr p24.1 p22.3 Seq+ 31913 ChimerSeq STARFusion TCGA_RNA-Seq TRAK1-CADM1 TRAK1 chr3 42128892 + CADM1 chr11 115069158 - Exonic hg19 LGG TCGA-DU-7015 6 10 Out-of-frame Inter-chr p22.1 q23.3 Tumor suppressor gene Seq+ 31914 ChimerSeq STARFusion TCGA_RNA-Seq NUDT3-DDR1 NUDT3 chr6 34309639 - DDR1 chr6 30856465 + Exonic hg19 LGG TCGA-DU-7015 2 9 In-Frame Intra-chr p21.31 TK:DDR Seq+ 31915 ChimerSeq STARFusion TCGA_RNA-Seq B3GALT5-IGSF5 B3GALT5 chr21 40977152 + IGSF5 chr21 41137462 + Exonic hg19 LGG TCGA-DU-7015 2 8 5'UTR-CDS Intra-chr q22.2 q22.2 31916 ChimerSeq STARFusion TCGA_RNA-Seq NFASC-ATP2B4 NFASC chr1 204797910 + ATP2B4 chr1 203667285 + Exonic hg19 LGG TCGA-DU-A7TD 148 723 5'UTR-CDS Intra-chr q32.1 q32.1 Seq+ 31917 ChimerSeq STARFusion TCGA_RNA-Seq WDR20-LGALS2 WDR20 chr14 102606509 + LGALS2 chr22 37967938 - Exonic hg19 LGG TCGA-DU-A7TD 6 54 In-Frame Inter-chr q32.31 q13.1 Seq+ 31918 ChimerSeq STARFusion TCGA_RNA-Seq WDR20-LGALS2 WDR20 chr14 102661457 + LGALS2 chr22 37967938 - Exonic hg19 LGG TCGA-DU-A7TD 5 54 In-Frame Inter-chr q32.31 q13.1 Seq+ 31919 ChimerSeq STARFusion TCGA_RNA-Seq NFIC-CELF5 NFIC chr19 3382241 + CELF5 chr19 3250983 + Exonic hg19 LGG TCGA-DU-A7TD 4 56 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 31920 ChimerSeq STARFusion TCGA_RNA-Seq WDR20-LGALS2 WDR20 chr14 102606509 + LGALS2 chr22 37966742 - Exonic hg19 LGG TCGA-DU-A7TD 3 54 Out-of-frame Inter-chr q32.31 q13.1 Seq+ 31921 ChimerSeq STARFusion TCGA_RNA-Seq SMARCAD1-GRID2 SMARCAD1 chr4 95174158 + GRID2 chr4 94547420 + Exonic hg19 LGG TCGA-DU-A7TD 8 23 In-Frame Intra-chr q22.3 q22.1 Seq+ 31922 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-ALDH6A1 FAM222B chr17 27161311 - ALDH6A1 chr14 74541720 - Exonic hg19 LGG TCGA-DU-A7TD 3 14 5'UTR-CDS Inter-chr q11.2 q24.3 Seq+ 31923 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-ALDH6A1 FAM222B chr17 27169700 - ALDH6A1 chr14 74541720 - Exonic hg19 LGG TCGA-DU-A7TD 2 14 5'UTR-CDS Inter-chr q11.2 q24.3 Seq+ 31924 ChimerSeq STARFusion TCGA_RNA-Seq TMC3-C15orf40 TMC3 chr15 81630996 - C15orf40 chr15 83660800 - Exonic hg19 LGG TCGA-DU-A7TC 9 27 CDS-3'UTR Intra-chr q25.1 q25.2 Seq+ 31925 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK4-PKM EIF2AK4 chr15 40301931 + PKM chr15 72502819 - Exonic hg19 LGG TCGA-DU-A7TC 5 18 Out-of-frame Intra-chr q15.1 q23 Seq+ 31926 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V1B2-KHDRBS2 ATP6V1B2 chr8 20070416 + KHDRBS2 chr6 62611276 - Exonic hg19 LGG TCGA-DU-A7TC 6 10 In-Frame Inter-chr p21.3 q11.1 Seq+ 31927 ChimerSeq STARFusion TCGA_RNA-Seq TMC3-C15orf40 TMC3 chr15 81630996 - C15orf40 chr15 83657909 - Exonic hg19 LGG TCGA-DU-A7TC 3 22 Out-of-frame Intra-chr q25.1 q25.2 Seq+ 31928 ChimerSeq STARFusion TCGA_RNA-Seq TP53BP1-DAPK2 TP53BP1 chr15 43771595 - DAPK2 chr15 64263760 - Exonic hg19 LGG TCGA-DU-A7TC 7 5 In-Frame Intra-chr q15.3 Tumor suppressor gene q22.31 CAMK:DAPK Tumor suppressor gene Seq+ 31929 ChimerSeq STARFusion TCGA_RNA-Seq VPS39-LYSMD2 VPS39 chr15 42492094 - LYSMD2 chr15 52017318 - Exonic hg19 LGG TCGA-DU-A7TC 4 16 Out-of-frame Intra-chr q15.1 q21.2 Seq+ 31930 ChimerSeq STARFusion TCGA_RNA-Seq TMC3-C15orf40 TMC3 chr15 81630996 - C15orf40 chr15 83657580 - Exonic hg19 LGG TCGA-DU-A7TC 2 22 CDS-3'UTR Intra-chr q25.1 q25.2 Seq+ 31931 ChimerSeq STARFusion TCGA_RNA-Seq VPS39-LYSMD2 VPS39 chr15 42492094 - LYSMD2 chr15 52017188 - Exonic hg19 LGG TCGA-DU-A7TC 3 16 Out-of-frame Intra-chr q15.1 q21.2 Seq+ 31932 ChimerSeq STARFusion TCGA_RNA-Seq UBE3A-MYO5C UBE3A chr15 25683636 - MYO5C chr15 52500840 - Exonic hg19 LGG TCGA-DU-A7TC 2 16 5'UTR-CDS Intra-chr q11.2 q21.2 Seq+ 31933 ChimerSeq STARFusion TCGA_RNA-Seq RAB11A-ARHGAP11B RAB11A chr15 66172089 + ARHGAP11B chr15 30916926 + Exonic hg19 LGG TCGA-DU-A7TC 2 14 CDS-5'UTR Intra-chr q22.31 31934 ChimerSeq STARFusion TCGA_RNA-Seq ABHD17C-SCAPER ABHD17C chr15 81042033 + SCAPER chr15 76763676 - Exonic hg19 LGG TCGA-DU-A7TC 3 7 Out-of-frame Intra-chr q25.1 q24.3 31935 ChimerSeq STARFusion TCGA_RNA-Seq TMOD2-C15orf59 TMOD2 chr15 52075025 + C15orf59 chr15 74032983 - Exonic hg19 LGG TCGA-DU-A7TC 3 5 In-Frame Intra-chr q21.2 q24.1 Seq+ 31936 ChimerSeq STARFusion TCGA_RNA-Seq HMBOX1-CLU HMBOX1 chr8 28748195 + CLU chr8 27468117 - Exonic hg19 LGG TCGA-DU-A7TC 2 6 5'UTR-5'UTR Intra-chr p21.1 Transcription factor p21.1 Tumor suppressor gene Seq+ 31937 ChimerSeq STARFusion TCGA_RNA-Seq ITPR1-BHLHE40 ITPR1 chr3 4704890 + BHLHE40 chr3 5023077 + Exonic hg19 LGG TCGA-DU-A7TA 6 15 In-Frame Intra-chr p26.1 p26.1 Transcription factor Seq+ 31938 ChimerSeq STARFusion TCGA_RNA-Seq AZIN1-ITPR1 AZIN1 chr8 103870241 - ITPR1 chr3 4669447 + Exonic hg19 LGG TCGA-DU-A7TA 2 8 5'UTR-CDS Inter-chr q22.3 p26.1 Seq+ 31939 ChimerSeq STARFusion TCGA_RNA-Seq AFTPH-KIAA1841 AFTPH chr2 64751746 + KIAA1841 chr2 61343114 + Exonic hg19 LGG TCGA-DU-A7TJ 37 101 5'UTR-CDS Intra-chr p14 p15 Seq+ 31940 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPLL-SERTAD2 HNRNPLL chr2 38818672 - SERTAD2 chr2 64864009 - Exonic hg19 LGG TCGA-DU-A7TJ 8 17 Out-of-frame Intra-chr p22.1 p14 Seq+ 31941 ChimerSeq STARFusion TCGA_RNA-Seq SAMD4A-CGRRF1 SAMD4A chr14 55034830 + CGRRF1 chr14 55004440 + Exonic hg19 LGG TCGA-DU-A7TJ 8 13 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 31942 ChimerSeq STARFusion TCGA_RNA-Seq ENO2-PHB2 ENO2 chr12 7025649 + PHB2 chr12 7077731 - Exonic hg19 LGG TCGA-DU-7298 4 13 Out-of-frame Intra-chr p13.31 p13.31 31943 ChimerSeq STARFusion TCGA_RNA-Seq MEGF11-RPL4 MEGF11 chr15 66273116 - RPL4 chr15 66795867 - Exonic hg19 LGG TCGA-DU-7298 4 12 In-Frame Intra-chr q22.31 q22.31 Seq+ 31944 ChimerSeq STARFusion TCGA_RNA-Seq SIK2-MEGF11 SIK2 chr11 111558886 + MEGF11 chr15 66274826 - Exonic hg19 LGG TCGA-DU-7298 3 8 In-Frame Inter-chr q23.1 q22.31 Seq+ 31945 ChimerSeq STARFusion TCGA_RNA-Seq DERA-STRAP DERA chr12 16064348 + STRAP chr12 16053881 + Exonic hg19 LGG TCGA-E1-A7YU 24 84 In-Frame Intra-chr p12.3 p12.3 Seq+ 31946 ChimerSeq STARFusion TCGA_RNA-Seq HKR1-BLVRB HKR1 chr19 37815167 + BLVRB chr19 40964452 - Exonic hg19 LGG TCGA-E1-A7YU 14 24 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.2 Seq+ 31947 ChimerSeq STARFusion TCGA_RNA-Seq HKR1-BLVRB HKR1 chr19 37815838 + BLVRB chr19 40964452 - Exonic hg19 LGG TCGA-E1-A7YU 2 24 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.2 Seq+ 31948 ChimerSeq STARFusion TCGA_RNA-Seq PCYT1A-TCTEX1D2 PCYT1A chr3 196014486 - TCTEX1D2 chr3 196022940 - Exonic hg19 LGG TCGA-E1-A7YV 10 20 5'UTR-CDS Intra-chr q29 q29 Seq+ 31949 ChimerSeq STARFusion TCGA_RNA-Seq KIF5A-XRCC6BP1 KIF5A chr12 57944183 + XRCC6BP1 chr12 58339411 + Exonic hg19 LGG TCGA-E1-A7YV 2 6 Out-of-frame Intra-chr q13.3 31950 ChimerSeq STARFusion TCGA_RNA-Seq MYT1-ST8SIA1 MYT1 chr20 62859324 + ST8SIA1 chr12 22507717 - Exonic hg19 LGG TCGA-E1-A7YW 5 10 CDS-5'UTR Inter-chr Other:WEE Transcription factor p12.1 Seq+ 31951 ChimerSeq STARFusion TCGA_RNA-Seq MYT1-ST8SIA1 MYT1 chr20 62859324 + ST8SIA1 chr12 22478393 - Exonic hg19 LGG TCGA-E1-A7YW 3 10 Out-of-frame Inter-chr Other:WEE Transcription factor p12.1 Seq+ 31952 ChimerSeq STARFusion TCGA_RNA-Seq TRIM24-AKR1D1 TRIM24 chr7 138189153 + AKR1D1 chr7 137773347 + Exonic hg19 LGG TCGA-DU-6396 9 43 In-Frame Intra-chr q33 Oncogene Tumor suppressor gene q33 Seq+ 31953 ChimerSeq STARFusion TCGA_RNA-Seq NFIC-CELF5 NFIC chr19 3435205 + CELF5 chr19 3284900 + Exonic hg19 LGG TCGA-DU-6396 4 45 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 31954 ChimerSeq STARFusion TCGA_RNA-Seq BSN-ARL8B BSN chr3 49680585 + ARL8B chr3 5212188 + Exonic hg19 LGG TCGA-DU-6396 2 20 In-Frame Intra-chr p21.31 p26.1 Seq+ 31955 ChimerSeq STARFusion TCGA_RNA-Seq BSN-ARL8B BSN chr3 49688512 + ARL8B chr3 5212188 + Exonic hg19 LGG TCGA-DU-6396 2 19 In-Frame Intra-chr p21.31 p26.1 Seq+ 31956 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 LGG TCGA-DU-6396 4 8 CDS-5'UTR Intra-chr q23 Seq+ 31957 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-CYP27B1 TSFM chr12 58180945 + CYP27B1 chr12 58159980 - Exonic hg19 LGG TCGA-E1-A7YD 116 362 In-Frame Intra-chr q14.1 q14.1 Seq+ 31958 ChimerSeq STARFusion TCGA_RNA-Seq TNS1-SPTBN1 TNS1 chr2 218679635 - SPTBN1 chr2 54826229 + Exonic hg19 LGG TCGA-E1-A7YD 11 10 In-Frame Intra-chr q35 p16.2 Tumor suppressor gene Seq+ 31959 ChimerSeq STARFusion TCGA_RNA-Seq ECE1-EIF4G3 ECE1 chr1 21671869 - EIF4G3 chr1 21144031 - Exonic hg19 LGG TCGA-E1-A7YD 10 12 In-Frame Intra-chr p36.12 p36.12 Seq+ 31960 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H11A-FIP1L1 ZC3H11A chr1 203787817 + FIP1L1 chr4 54292039 + Exonic hg19 LGG TCGA-E1-A7YD 7 13 Out-of-frame Inter-chr q32.1 q12 Seq+ 31961 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM2-GLI1 R3HDM2 chr12 57824503 - GLI1 chr12 57857448 + Exonic hg19 LGG TCGA-E1-A7YD 4 3 5'UTR-5'UTR Intra-chr q13.3 q13.3 Tumor suppressor gene Transcription factor Seq+ 31962 ChimerSeq STARFusion TCGA_RNA-Seq PAICS-PDGFRA PAICS chr4 57302494 + PDGFRA chr4 55136800 + Exonic hg19 LGG TCGA-E1-A7YD 2 5 Out-of-frame Intra-chr q12 q12 Oncogene Seq+ 31963 ChimerSeq STARFusion TCGA_RNA-Seq ZNF618-SLC31A1 ZNF618 chr9 116638693 + SLC31A1 chr9 116018394 + Exonic hg19 LGG TCGA-E1-A7YE 4 23 CDS-5'UTR Intra-chr q32 Transcription factor q32 Seq+ 31964 ChimerSeq STARFusion TCGA_RNA-Seq GFAP-IPO8 GFAP chr17 42991395 - IPO8 chr12 30823919 - Exonic hg19 LGG TCGA-DB-5279 7 5 Out-of-frame Inter-chr q21.31 p11.21 31965 ChimerSeq STARFusion TCGA_RNA-Seq ZNF583-CCDC106 ZNF583 chr19 56925809 + CCDC106 chr19 56162649 + Exonic hg19 LGG TCGA-E1-A7YL 201 312 In-Frame Intra-chr q13.43 Transcription factor q13.42 Seq+ 31966 ChimerSeq STARFusion TCGA_RNA-Seq ZSCAN18-ATP9B ZSCAN18 chr19 58609541 - ATP9B chr18 77063604 + Exonic hg19 LGG TCGA-E1-A7YL 39 41 5'UTR-CDS Inter-chr q13.43 Transcription factor Seq+ 31967 ChimerSeq STARFusion TCGA_RNA-Seq ZNF329-EPG5 ZNF329 chr19 58662119 - EPG5 chr18 43532609 - Exonic hg19 LGG TCGA-E1-A7YL 20 9 5'UTR-CDS Inter-chr q13.43 Transcription factor q21.1 Seq+ 31968 ChimerSeq STARFusion TCGA_RNA-Seq NRD1-VPS53 NRD1 chr1 52258049 - VPS53 chr17 440416 - Exonic hg19 LGG TCGA-E1-A7YL 11 36 In-Frame Inter-chr Tumor suppressor gene Seq+ 31969 ChimerSeq STARFusion TCGA_RNA-Seq ZNF460-HSPD1 ZNF460 chr19 57792204 + HSPD1 chr2 198363574 - Exonic hg19 LGG TCGA-E1-A7YL 6 26 CDS-5'UTR Inter-chr q13.43 Transcription factor q33.1 Tumor suppressor gene Seq+ 31970 ChimerSeq STARFusion TCGA_RNA-Seq NRD1-VPS53 NRD1 chr1 52260144 - VPS53 chr17 440416 - Exonic hg19 LGG TCGA-E1-A7YL 2 35 In-Frame Inter-chr Tumor suppressor gene Seq+ 31971 ChimerSeq STARFusion TCGA_RNA-Seq ZNF460-HSPD1 ZNF460 chr19 57791492 + HSPD1 chr2 198363574 - Exonic hg19 LGG TCGA-E1-A7YL 4 23 5'UTR-5'UTR Inter-chr q13.43 Transcription factor q33.1 Tumor suppressor gene Seq+ 31972 ChimerSeq STARFusion TCGA_RNA-Seq RNF165-LAIR2 RNF165 chr18 43914298 + LAIR2 chr19 55014916 + Exonic hg19 LGG TCGA-E1-A7YL 4 12 In-Frame Inter-chr q21.1 Seq+ 31973 ChimerSeq STARFusion TCGA_RNA-Seq RYR3-BUB1B RYR3 chr15 33765739 + BUB1B chr15 40457254 + Exonic hg19 LGG TCGA-E1-A7YL 4 7 Out-of-frame Intra-chr q13.3 q15.1 Oncogene Seq+ 31974 ChimerSeq STARFusion TCGA_RNA-Seq ZNF460-SYT4 ZNF460 chr19 57792204 + SYT4 chr18 40854359 - Exonic hg19 LGG TCGA-E1-A7YL 2 13 Out-of-frame Inter-chr q13.43 Transcription factor q12.3 Seq+ 31975 ChimerSeq STARFusion TCGA_RNA-Seq ZNF460-SYT4 ZNF460 chr19 57791492 + SYT4 chr18 40854359 - Exonic hg19 LGG TCGA-E1-A7YL 2 13 5'UTR-CDS Inter-chr q13.43 Transcription factor q12.3 Seq+ 31976 ChimerSeq STARFusion TCGA_RNA-Seq CD81-GFAP CD81 chr11 2417200 + GFAP chr17 42983780 - Exonic hg19 LGG TCGA-DB-5273 3 21 CDS-3'UTR Inter-chr p15.5 q21.31 31977 ChimerSeq STARFusion TCGA_RNA-Seq GFAP-SCD5 GFAP chr17 42988711 - SCD5 chr4 83552505 - Exonic hg19 LGG TCGA-DB-5273 3 20 Out-of-frame Inter-chr q21.31 q21.22 31978 ChimerSeq STARFusion TCGA_RNA-Seq KRT8P1-GFAP KRT8P1 chr14 39197438 + GFAP chr17 42988025 - Exonic hg19 LGG TCGA-DB-5273 3 6 Out-of-frame Inter-chr q21.1 q21.31 31979 ChimerSeq STARFusion TCGA_RNA-Seq B3GALT5-IGSF5 B3GALT5 chr21 40977152 + IGSF5 chr21 41137462 + Exonic hg19 LGG TCGA-DB-5273 2 6 5'UTR-CDS Intra-chr q22.2 q22.2 31980 ChimerSeq STARFusion TCGA_RNA-Seq PDGFRA-FIP1L1 PDGFRA chr4 55156721 + FIP1L1 chr4 54310215 + Exonic hg19 LGG TCGA-E1-A7YI 2304 8544 In-Frame Intra-chr q12 Oncogene q12 KB Seq+ 31981 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1551-MLIP KIAA1551 chr12 32113805 + MLIP chr6 54095512 + Exonic hg19 LGG TCGA-E1-A7YI 20 140 Out-of-frame Inter-chr p11.21 p12.1 Seq+ 31982 ChimerSeq STARFusion TCGA_RNA-Seq SUPT3H-TDRG1 SUPT3H chr6 45332938 - TDRG1 chr6 40347021 + Exonic hg19 LGG TCGA-E1-A7YI 38 67 5'UTR-5'UTR Intra-chr p21.1 p21.2 Tumor suppressor gene Seq+ 31983 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1551-MLIP KIAA1551 chr12 32113805 + MLIP chr6 54122106 + Exonic hg19 LGG TCGA-E1-A7YI 18 138 Out-of-frame Inter-chr p11.21 p12.1 Seq+ 31984 ChimerSeq STARFusion TCGA_RNA-Seq SCFD2-LNX1 SCFD2 chr4 54139993 - LNX1 chr4 54457682 - Exonic hg19 LGG TCGA-E1-A7YI 17 80 CDS-5'UTR Intra-chr q12 q12 Seq+ 31985 ChimerSeq STARFusion TCGA_RNA-Seq SCFD2-LNX1 SCFD2 chr4 54139993 - LNX1 chr4 54483547 - Exonic hg19 LGG TCGA-E1-A7YI 15 79 CDS-5'UTR Intra-chr q12 q12 Seq+ 31986 ChimerSeq STARFusion TCGA_RNA-Seq SCFD2-LNX1 SCFD2 chr4 54139993 - LNX1 chr4 54440255 - Exonic hg19 LGG TCGA-E1-A7YI 5 79 CDS-5'UTR Intra-chr q12 q12 Seq+ 31987 ChimerSeq STARFusion TCGA_RNA-Seq SCFD2-LNX1 SCFD2 chr4 54179803 - LNX1 chr4 54457682 - Exonic hg19 LGG TCGA-E1-A7YI 2 79 CDS-5'UTR Intra-chr q12 q12 Seq+ 31988 ChimerSeq STARFusion TCGA_RNA-Seq FIP1L1-CHIC2 FIP1L1 chr4 54294350 + CHIC2 chr4 54880286 - Exonic hg19 LGG TCGA-E1-A7YI 4 14 Out-of-frame Intra-chr q12 q12 Seq+ 31989 ChimerSeq STARFusion TCGA_RNA-Seq PDGFRA-CHIC2 PDGFRA chr4 55095582 + CHIC2 chr4 54880286 - Exonic hg19 LGG TCGA-E1-A7YI 2 7 5'UTR-CDS Intra-chr q12 Oncogene q12 31990 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-C7orf72 EGFR chr7 55268106 + C7orf72 chr7 50143910 + Exonic hg19 LGG TCGA-E1-A7YJ 6 13 Out-of-frame Intra-chr p11.2 TK:EGFR Oncogene p12.2 Seq+ 31991 ChimerSeq STARFusion TCGA_RNA-Seq NUDCD3-CAMK2B NUDCD3 chr7 44431896 - CAMK2B chr7 44323824 - Exonic hg19 LGG TCGA-E1-A7YJ 3 8 Out-of-frame Intra-chr p13 p13 31992 ChimerSeq STARFusion TCGA_RNA-Seq SHC2-TJP3 SHC2 chr19 440862 - TJP3 chr19 3750136 + Exonic hg19 LGG TCGA-DB-5270 6 18 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 31993 ChimerSeq STARFusion TCGA_RNA-Seq SUMF2-SEPT14 SUMF2 chr7 56147301 + SEPT14 chr7 55886916 - Exonic hg19 LGG TCGA-HW-A5KK 17 149 In-Frame Intra-chr p11.2 p11.2 Seq+ 31994 ChimerSeq STARFusion TCGA_RNA-Seq SUMF2-SEPT14 SUMF2 chr7 56146201 + SEPT14 chr7 55886916 - Exonic hg19 LGG TCGA-HW-A5KK 13 132 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 31995 ChimerSeq STARFusion TCGA_RNA-Seq SUMF2-SEPT14 SUMF2 chr7 56147160 + SEPT14 chr7 55886916 - Exonic hg19 LGG TCGA-HW-A5KK 4 132 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 31996 ChimerSeq STARFusion TCGA_RNA-Seq SUMF2-SEPT14 SUMF2 chr7 56145879 + SEPT14 chr7 55886916 - Exonic hg19 LGG TCGA-HW-A5KK 4 132 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 31997 ChimerSeq STARFusion TCGA_RNA-Seq TRPS1-DEPTOR TRPS1 chr8 116680772 - DEPTOR chr8 121061815 + Exonic hg19 LGG TCGA-HW-A5KK 13 47 5'UTR-CDS Intra-chr q23.3 Transcription factor q24.12 Seq+ 31998 ChimerSeq STARFusion TCGA_RNA-Seq BAI1-EXT1 BAI1 chr8 143592434 + EXT1 chr8 118834836 - Exonic hg19 LGG TCGA-HW-A5KK 3 14 In-Frame Intra-chr q24.11 Oncogene Tumor suppressor gene Seq+ 31999 ChimerSeq STARFusion TCGA_RNA-Seq JAZF1-FAM86LP JAZF1 chr7 28220082 - FAM86LP chr7 6971412 - Exonic hg19 LGG TCGA-HW-A5KK 4 9 Out-of-frame Intra-chr p15.1 Transcription factor p22.1 32000 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC2-ATP2B3 TRAPPC2 chrX 13737990 - ATP2B3 chrX 152845436 + Exonic hg19 LGG TCGA-TQ-A8XE 18 54 In-Frame Intra-chr p22.2 q28 Seq+ 32001 ChimerSeq STARFusion TCGA_RNA-Seq IDS-PHACTR1 IDS chrX 148577877 - PHACTR1 chr6 13160436 + Exonic hg19 LGG TCGA-TQ-A8XE 2 6 Out-of-frame Inter-chr q28 Seq+ 32002 ChimerSeq STARFusion TCGA_RNA-Seq IDS-PHACTR1 IDS chrX 148577877 - PHACTR1 chr6 13160436 + Exonic hg19 LGG TCGA-TQ-A8XE 2 6 Out-of-frame Inter-chr q28 Seq+ 32003 ChimerSeq STARFusion TCGA_RNA-Seq BCOR-EP300 BCOR chrX 39931308 - EP300 chr22 41575157 + Exonic hg19 LGG TCGA-DU-6404 31 238 Out-of-frame Inter-chr p11.4 Oncogene q13.2 Oncogene Seq+ 32004 ChimerSeq STARFusion TCGA_RNA-Seq EP300-BCOR EP300 chr22 41573820 + BCOR chrX 39930412 - Exonic hg19 LGG TCGA-DU-6404 34 183 Out-of-frame Inter-chr q13.2 Oncogene p11.4 Oncogene Seq+ 32005 ChimerSeq STARFusion TCGA_RNA-Seq EP300-BCOR EP300 chr22 41573820 + BCOR chrX 39930943 - Exonic hg19 LGG TCGA-DU-6404 12 182 Out-of-frame Inter-chr q13.2 Oncogene p11.4 Oncogene Seq+ 32006 ChimerSeq STARFusion TCGA_RNA-Seq BCOR-L3MBTL2 BCOR chrX 39931602 - L3MBTL2 chr22 41605700 + Exonic hg19 LGG TCGA-DU-6404 22 93 In-Frame Inter-chr p11.4 Oncogene q13.2 Seq+ 32007 ChimerSeq STARFusion TCGA_RNA-Seq BCOR-L3MBTL2 BCOR chrX 39931602 - L3MBTL2 chr22 41601255 + Exonic hg19 LGG TCGA-DU-6404 5 91 CDS-5'UTR Inter-chr p11.4 Oncogene q13.2 Seq+ 32008 ChimerSeq STARFusion TCGA_RNA-Seq SCO1-ARX SCO1 chr17 10590044 - ARX chrX 25023027 - Exonic hg19 LGG TCGA-DU-6404 10 34 Out-of-frame Inter-chr p13.1 p21.3 Transcription factor Seq+ 32009 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55268106 + SEPT14 chr7 55863785 - Exonic hg19 LGG TCGA-DU-6406 919 2415 In-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 32010 ChimerSeq STARFusion TCGA_RNA-Seq SIM2-KCNJ6 SIM2 chr21 38072221 + KCNJ6 chr21 39213011 - Exonic hg19 LGG TCGA-DU-6406 8 58 CDS-5'UTR Intra-chr q22.13 Transcription factor q22.13 Seq+ 32011 ChimerSeq STARFusion TCGA_RNA-Seq TTC3-BRWD1 TTC3 chr21 38498443 + BRWD1 chr21 40636611 - Exonic hg19 LGG TCGA-DU-6406 8 25 Out-of-frame Intra-chr q22.13 q22.2 Seq+ 32012 ChimerSeq STARFusion TCGA_RNA-Seq VOPP1-PSPHP1 VOPP1 chr7 55639964 - PSPHP1 chr7 55840874 + Exonic hg19 LGG TCGA-DU-6406 6 27 Out-of-frame Intra-chr p11.2 p11.2 32013 ChimerSeq STARFusion TCGA_RNA-Seq DSCR3-NIPBL DSCR3 chr21 38639539 - NIPBL chr5 37019413 + Exonic hg19 LGG TCGA-DU-6406 7 22 In-Frame Inter-chr q22.13 p13.2 Seq+ 32014 ChimerSeq STARFusion TCGA_RNA-Seq LMBRD2-ERG LMBRD2 chr5 36108636 - ERG chr21 39752323 - Exonic hg19 LGG TCGA-DU-6406 3 14 CDS-3'UTR Inter-chr p13.2 q22.2 Oncogene Transcription factor Seq+ 32015 ChimerSeq STARFusion TCGA_RNA-Seq GDI2-CPVL GDI2 chr10 5842561 - CPVL chr7 29160687 - Exonic hg19 LGG TCGA-DU-6401 16 36 CDS-5'UTR Inter-chr p15.1 p14.3 Seq+ 32016 ChimerSeq STARFusion TCGA_RNA-Seq ABR-MAN2B1 ABR chr17 994905 - MAN2B1 chr19 12776619 - Exonic hg19 LGG TCGA-DU-6402 13 48 In-Frame Inter-chr p13.3 p13.13 Seq+ 32017 ChimerSeq STARFusion TCGA_RNA-Seq XRCC6-UBE2D2 XRCC6 chr22 42033795 + UBE2D2 chr5 138994171 + Exonic hg19 LGG TCGA-DU-6402 4 14 Out-of-frame Inter-chr q13.2 q31.2 Seq+ 32018 ChimerSeq STARFusion TCGA_RNA-Seq BACH2-MAP3K7 BACH2 chr6 90916288 - MAP3K7 chr6 91281526 - Exonic hg19 LGG TCGA-DU-6403 4 22 5'UTR-CDS Intra-chr q15 Transcription factor q15 STE:STE11 Oncogene Seq+ 32019 ChimerSeq STARFusion TCGA_RNA-Seq FRMD4A-OR13A1 FRMD4A chr10 14050059 - OR13A1 chr10 45799948 - Exonic hg19 LGG TCGA-DU-6403 5 7 Out-of-frame Intra-chr p13 Seq+ 32020 ChimerSeq STARFusion TCGA_RNA-Seq B3GALT5-IGSF5 B3GALT5 chr21 40977152 + IGSF5 chr21 41137462 + Exonic hg19 LGG TCGA-DU-6408 4 7 5'UTR-CDS Intra-chr q22.2 q22.2 32021 ChimerSeq STARFusion TCGA_RNA-Seq C11orf48-BSCL2 C11orf48 chr11 62437113 - BSCL2 chr11 62462183 - Exonic hg19 LGG TCGA-S9-A7R8 8 14 Out-of-frame Intra-chr q12.3 Seq+ 32022 ChimerSeq STARFusion TCGA_RNA-Seq ANO6-HNRNPUL1 ANO6 chr12 45610174 + HNRNPUL1 chr19 41774128 + Exonic hg19 LGG TCGA-S9-A7R3 11 28 In-Frame Inter-chr q12 q13.2 Seq+ 32023 ChimerSeq STARFusion TCGA_RNA-Seq TCERG1L-CNTN1 TCERG1L chr10 133106474 - CNTN1 chr12 41302159 + Exonic hg19 LGG TCGA-S9-A7R3 6 11 CDS-5'UTR Inter-chr q26.3 q12 Seq+ 32024 ChimerSeq STARFusion TCGA_RNA-Seq ERCC2-C12orf40 ERCC2 chr19 45872188 - C12orf40 chr12 40110558 + Exonic hg19 LGG TCGA-S9-A7R3 3 4 Out-of-frame Inter-chr q13.32 Oncogene q12 Seq+ 32025 ChimerSeq STARFusion TCGA_RNA-Seq XRCC6BP1-HIGD1C XRCC6BP1 chr12 58340859 + HIGD1C chr12 51354751 + Exonic hg19 LGG TCGA-S9-A7R2 3 32 Out-of-frame Intra-chr q13.12 Seq+ 32026 ChimerSeq STARFusion TCGA_RNA-Seq KDM4C-KIAA1045 KDM4C chr9 6893232 + KIAA1045 chr9 34976149 + Exonic hg19 LGG TCGA-S9-A7R1 2 6 In-Frame Intra-chr p24.1 Seq+ 32027 ChimerSeq STARFusion TCGA_RNA-Seq RBFOX2-MPPED1 RBFOX2 chr22 36334895 - MPPED1 chr22 43870616 + Exonic hg19 LGG TCGA-S9-A7R7 4 18 Out-of-frame Intra-chr q13.2 Seq+ 32028 ChimerSeq STARFusion TCGA_RNA-Seq KRT8P1-GFAP KRT8P1 chr14 39197436 + GFAP chr17 42988027 - Exonic hg19 LGG TCGA-S9-A7R7 5 3 Out-of-frame Inter-chr q21.1 q21.31 32029 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-COG4 CBFB chr16 67100701 + COG4 chr16 70553634 - Exonic hg19 LGG TCGA-S9-A7R7 2 5 In-Frame Intra-chr q22.1 q22.1 Seq+ 32030 ChimerSeq STARFusion TCGA_RNA-Seq AKTIP-COTL1 AKTIP chr16 53537059 - COTL1 chr16 84600561 - Exonic hg19 LGG TCGA-S9-A7R7 2 4 5'UTR-CDS Intra-chr q12.2 q24.1 Seq+ 32031 ChimerSeq STARFusion TCGA_RNA-Seq MBTD1-UTP18 MBTD1 chr17 49337196 - UTP18 chr17 49362606 + Exonic hg19 LGG TCGA-F6-A8O4 32 133 5'UTR-CDS Intra-chr q21.33 q21.33 Seq+ 32032 ChimerSeq STARFusion TCGA_RNA-Seq MBTD1-UTP18 MBTD1 chr17 49336504 - UTP18 chr17 49362606 + Exonic hg19 LGG TCGA-F6-A8O4 25 119 5'UTR-CDS Intra-chr q21.33 q21.33 Seq+ 32033 ChimerSeq STARFusion TCGA_RNA-Seq MBTD1-UTP18 MBTD1 chr17 49336500 - UTP18 chr17 49362606 + Exonic hg19 LGG TCGA-F6-A8O4 7 119 5'UTR-CDS Intra-chr q21.33 q21.33 Seq+ 32034 ChimerSeq STARFusion TCGA_RNA-Seq NUMBL-BRD4 NUMBL chr19 41173867 - BRD4 chr19 15349699 - Exonic hg19 LGG TCGA-P5-A780 7 1 Out-of-frame Intra-chr q13.2 p13.12 Atypical:BRD 32035 ChimerSeq STARFusion TCGA_RNA-Seq SLC9A3-ZDHHC11B SLC9A3 chr5 524227 - ZDHHC11B chr5 716980 - Exonic hg19 LGG TCGA-P5-A780 4 11 Out-of-frame Intra-chr p15.33 p15.33 32036 ChimerSeq STARFusion TCGA_RNA-Seq SLC9A3-ZDHHC11 SLC9A3 chr5 524227 - ZDHHC11 chr5 801279 - Exonic hg19 LGG TCGA-P5-A780 4 10 Out-of-frame Intra-chr p15.33 p15.33 Seq+ 32037 ChimerSeq STARFusion TCGA_RNA-Seq PLCB4-DDX11L1 PLCB4 chr20 9198099 + DDX11L1 chr1 12010 + Exonic hg19 LGG TCGA-P5-A5EW 2 25 5'UTR-3'UTR Inter-chr p12.3 p36.33 32038 ChimerSeq STARFusion TCGA_RNA-Seq ITPR2-ADIPOR2 ITPR2 chr12 26943090 - ADIPOR2 chr12 1882008 + Exonic hg19 LGG TCGA-HT-7690 17 26 Out-of-frame Intra-chr p11.23 p13.33 Seq+ 32039 ChimerSeq STARFusion TCGA_RNA-Seq ABR-YWHAE ABR chr17 982570 - YWHAE chr17 1268352 - Exonic hg19 LGG TCGA-HT-7693 104 456 In-Frame Intra-chr p13.3 p13.3 Seq+ 32040 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R2B-DPYSL3 PPP2R2B chr5 146257565 - DPYSL3 chr5 146804526 - Exonic hg19 LGG TCGA-VW-A8FI 8 47 Out-of-frame Intra-chr q32 q32 Seq+ 32041 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-DCTN2 TSFM chr12 58186856 + DCTN2 chr12 57929628 - Exonic hg19 LGG TCGA-VW-A8FI 2 6 Out-of-frame Intra-chr q14.1 q13.3 Seq+ 32042 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D19-GPR125 TBC1D19 chr4 26585914 + GPR125 chr4 22348446 - Exonic hg19 LGG TCGA-P5-A5EZ 8 13 CDS-3'UTR Intra-chr p15.2 32043 ChimerSeq STARFusion TCGA_RNA-Seq CTBP1-FAM193A CTBP1 chr4 1231971 - FAM193A chr4 2626989 + Exonic hg19 LGG TCGA-P5-A5EZ 3 22 CDS-5'UTR Intra-chr p16.3 p16.3 Seq+ 32044 ChimerSeq STARFusion TCGA_RNA-Seq CTBP1-RNF4 CTBP1 chr4 1231971 - RNF4 chr4 2626989 + Exonic hg19 LGG TCGA-P5-A5EZ 3 12 CDS-3'UTR Intra-chr p16.3 p16.3 Seq+ 32045 ChimerSeq STARFusion TCGA_RNA-Seq ISCA1-GOLM1 ISCA1 chr9 88886922 - GOLM1 chr9 88694256 - Exonic hg19 LGG TCGA-DU-7019 3 9 CDS-5'UTR Intra-chr q21.33 q21.33 32046 ChimerSeq STARFusion TCGA_RNA-Seq CLU-GFAP CLU chr8 27455746 - GFAP chr17 42983714 - Exonic hg19 LGG TCGA-S9-A6WN 5 240 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q21.31 Seq+ 32047 ChimerSeq STARFusion TCGA_RNA-Seq CLU-GFAP CLU chr8 27462460 - GFAP chr17 42984507 - Exonic hg19 LGG TCGA-S9-A6WN 3 235 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q21.31 Seq+ 32048 ChimerSeq STARFusion TCGA_RNA-Seq TCHH-GFAP TCHH chr1 152084328 - GFAP chr17 42988825 - Exonic hg19 LGG TCGA-S9-A6WN 19 0 Out-of-frame Inter-chr q21.3 q21.31 32049 ChimerSeq STARFusion TCGA_RNA-Seq CLU-TESC CLU chr8 27455977 - TESC chr12 117536326 - Exonic hg19 LGG TCGA-S9-A6WN 10 1 3'UTR-3'UTR Inter-chr p21.1 Tumor suppressor gene q24.22 32050 ChimerSeq STARFusion TCGA_RNA-Seq ITPR3-LINC01016 ITPR3 chr6 33589468 + LINC01016 chr6 33861476 - Exonic hg19 LGG TCGA-S9-A6WN 6 11 Out-of-frame Intra-chr p21.31 p21.31 32051 ChimerSeq STARFusion TCGA_RNA-Seq PKD1-CLU PKD1 chr16 2141006 - CLU chr8 27468117 - Exonic hg19 LGG TCGA-S9-A6WN 8 1 CDS-5'UTR Inter-chr p13.3 CAMK:PKD Tumor suppressor gene p21.1 Tumor suppressor gene 32052 ChimerSeq STARFusion TCGA_RNA-Seq KRT8P1-GFAP KRT8P1 chr14 39197440 + GFAP chr17 42988023 - Exonic hg19 LGG TCGA-S9-A6WN 7 4 Out-of-frame Inter-chr q21.1 q21.31 32053 ChimerSeq STARFusion TCGA_RNA-Seq KRT8P1-GFAP KRT8P1 chr14 39197438 + GFAP chr17 42988025 - Exonic hg19 LGG TCGA-DU-7012 6 3 Out-of-frame Inter-chr q21.1 q21.31 32054 ChimerSeq STARFusion TCGA_RNA-Seq LIN9-KDM5B LIN9 chr1 226465476 - KDM5B chr1 202746222 - Exonic hg19 LGG TCGA-CS-5395 7 22 Out-of-frame Intra-chr q42.12 Tumor suppressor gene q32.1 Transcription factor Seq+ 32055 ChimerSeq STARFusion TCGA_RNA-Seq RUSC2-ABAT RUSC2 chr9 35490169 + ABAT chr16 8857926 + Exonic hg19 LGG TCGA-CS-5397 34 34 5'UTR-CDS Inter-chr p13.3 p13.2 Seq+ 32056 ChimerSeq STARFusion TCGA_RNA-Seq SMOX-EIF3D SMOX chr20 4129624 + EIF3D chr22 36922178 - Exonic hg19 LGG TCGA-CS-5397 16 52 5'UTR-5'UTR Inter-chr p13 q12.3 Seq+ 32057 ChimerSeq STARFusion TCGA_RNA-Seq AIP-LYZL6 AIP chr11 67250728 + LYZL6 chr17 34266562 - Exonic hg19 LGG TCGA-CS-5397 8 48 CDS-5'UTR Inter-chr q13.2 Tumor suppressor gene q12 Seq+ 32058 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0430-DEXI KIAA0430 chr16 15706414 - DEXI chr16 11023416 - Exonic hg19 LGG TCGA-CS-5397 4 6 CDS-3'UTR Intra-chr p13.13 32059 ChimerSeq STARFusion TCGA_RNA-Seq FAM219A-MKL2 FAM219A chr9 34458202 - MKL2 chr16 14304100 + Exonic hg19 LGG TCGA-CS-5397 4 4 Out-of-frame Inter-chr p13.3 p13.12 Seq+ 32060 ChimerSeq STARFusion TCGA_RNA-Seq SHB-GRIN2A SHB chr9 37955880 - GRIN2A chr16 9943818 - Exonic hg19 LGG TCGA-CS-5397 3 6 Out-of-frame Inter-chr p13.1 p13.2 Tumor suppressor gene Seq+ 32061 ChimerSeq STARFusion TCGA_RNA-Seq TXN2-CTNNA1 TXN2 chr22 36876622 - CTNNA1 chr5 138059156 + Exonic hg19 LGG TCGA-CS-5397 3 6 CDS-5'UTR Inter-chr q12.3 q31.2 Oncogene Seq+ 32062 ChimerSeq STARFusion TCGA_RNA-Seq PTEN-PYGB PTEN chr10 89693008 + PYGB chr20 25249765 + Exonic hg19 LGG TCGA-FG-A87N 18 44 In-Frame Inter-chr q23.31 Oncogene Tumor suppressor gene p11.21 Seq+ 32063 ChimerSeq STARFusion TCGA_RNA-Seq MLLT3-AKAP2 MLLT3 chr9 20620653 - AKAP2 chr9 112629771 + Exonic hg19 LGG TCGA-FG-A87N 2 7 CDS-5'UTR Intra-chr p21.3 q31.3 32064 ChimerSeq STARFusion TCGA_RNA-Seq MLLT3-PALM2 MLLT3 chr9 20620653 - PALM2 chr9 112629771 + Exonic hg19 LGG TCGA-FG-A87N 2 7 Out-of-frame Intra-chr p21.3 q31.3 Seq+ 32065 ChimerSeq STARFusion TCGA_RNA-Seq LINC00969-CPNE4 LINC00969 chr3 195404719 + CPNE4 chr3 131404802 - Exonic hg19 LGG TCGA-HT-A5RA 17 48 Out-of-frame Intra-chr q22.1 32066 ChimerSeq STARFusion TCGA_RNA-Seq SDHAP2-CPNE4 SDHAP2 chr3 195404719 + CPNE4 chr3 131404802 - Exonic hg19 LGG TCGA-HT-A5RA 17 48 5'UTR-CDS Intra-chr q22.1 32067 ChimerSeq STARFusion TCGA_RNA-Seq MTOR-CR1L MTOR chr1 11288725 - CR1L chr1 207857217 + Exonic hg19 LGG TCGA-HT-A5RA 12 51 Out-of-frame Intra-chr p36.22 Oncogene q32.2 Seq+ 32068 ChimerSeq STARFusion TCGA_RNA-Seq BDH1-ZBBX BDH1 chr3 197249511 - ZBBX chr3 166960431 - Exonic hg19 LGG TCGA-HT-A5RA 14 40 In-Frame Intra-chr q26.1 Seq+ 32069 ChimerSeq STARFusion TCGA_RNA-Seq NEK11-BDH1 NEK11 chr3 130889731 + BDH1 chr3 197241287 - Exonic hg19 LGG TCGA-HT-A5RA 10 35 In-Frame Intra-chr q22.1 Other:NEK Seq+ 32070 ChimerSeq STARFusion TCGA_RNA-Seq MKRN1-DENND2A MKRN1 chr7 140156452 - DENND2A chr7 140219518 - Exonic hg19 LGG TCGA-HT-A5RA 8 26 Out-of-frame Intra-chr q34 q34 Seq+ 32071 ChimerSeq STARFusion TCGA_RNA-Seq UBFD1-TMEM159 UBFD1 chr16 23570997 + TMEM159 chr16 21172406 + Exonic hg19 LGG TCGA-HT-A5RC 10 41 CDS-5'UTR Intra-chr p12.2 Seq+ 32072 ChimerSeq STARFusion TCGA_RNA-Seq SASH1-MLLT4 SASH1 chr6 148841029 + MLLT4 chr6 168343809 + Exonic hg19 LGG TCGA-HT-A5RC 9 31 In-Frame Intra-chr q24.3 Tumor suppressor gene Seq+ 32073 ChimerSeq STARFusion TCGA_RNA-Seq SCRIB-NRBP2 SCRIB chr8 144897384 - NRBP2 chr8 144922401 - Exonic hg19 LGG TCGA-HT-A5RC 4 41 In-Frame Intra-chr Tumor suppressor gene q24.3 Other:NRBP Seq+ 32074 ChimerSeq STARFusion TCGA_RNA-Seq PIAS4-ZFR2 PIAS4 chr19 4013347 + ZFR2 chr19 3823401 - Exonic hg19 LGG TCGA-HT-A5RC 4 30 In-Frame Intra-chr p13.3 p13.3 Seq+ 32075 ChimerSeq STARFusion TCGA_RNA-Seq UBFD1-TMEM159 UBFD1 chr16 23570997 + TMEM159 chr16 21172299 + Exonic hg19 LGG TCGA-HT-A5RC 2 34 CDS-5'UTR Intra-chr p12.2 Seq+ 32076 ChimerSeq STARFusion TCGA_RNA-Seq PIAS4-ZFR2 PIAS4 chr19 4013347 + ZFR2 chr19 3825405 - Exonic hg19 LGG TCGA-HT-A5RC 2 30 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 32077 ChimerSeq STARFusion TCGA_RNA-Seq GGA2-PRKCB GGA2 chr16 23502998 - PRKCB chr16 23999829 + Exonic hg19 LGG TCGA-HT-A5RC 2 27 In-Frame Intra-chr p12.2 p12.2 Tumor suppressor gene Seq+ 32078 ChimerSeq STARFusion TCGA_RNA-Seq MLLT4-SASH1 MLLT4 chr6 168281197 + SASH1 chr6 148711270 + Exonic hg19 LGG TCGA-HT-A5RC 2 21 In-Frame Intra-chr q24.3 Tumor suppressor gene Seq+ 32079 ChimerSeq STARFusion TCGA_RNA-Seq OAZ2-RBPMS2 OAZ2 chr15 64983633 - RBPMS2 chr15 65043837 - Exonic hg19 LGG TCGA-FG-A87Q 5 26 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 32080 ChimerSeq STARFusion TCGA_RNA-Seq OAZ2-RBPMS2 OAZ2 chr15 64995228 - RBPMS2 chr15 65043837 - Exonic hg19 LGG TCGA-FG-A87Q 3 26 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 32081 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K3-TANC2 MAP3K3 chr17 61744420 + TANC2 chr17 61465996 + Exonic hg19 LGG TCGA-FG-A87Q 4 5 Out-of-frame Intra-chr q23.3 STE:STE11 q23.2 Seq+ 32082 ChimerSeq STARFusion TCGA_RNA-Seq SWAP70-ZNF143 SWAP70 chr11 9754257 + ZNF143 chr11 9516193 + Exonic hg19 LGG TCGA-HT-8104 5 49 In-Frame Intra-chr p15.4 p15.4 Transcription factor Seq+ 32083 ChimerSeq STARFusion TCGA_RNA-Seq ANK2-ALPK1 ANK2 chr4 113825670 + ALPK1 chr4 113350305 + Exonic hg19 LGG TCGA-HT-8104 11 13 In-Frame Intra-chr q25 q25 Seq+ 32084 ChimerSeq STARFusion TCGA_RNA-Seq NUP93-GNAO1 NUP93 chr16 56792567 + GNAO1 chr16 56309843 + Exonic hg19 LGG TCGA-HT-8104 8 21 Out-of-frame Intra-chr q13 q13 Seq+ 32085 ChimerSeq STARFusion TCGA_RNA-Seq SBF2-CALM3 SBF2 chr11 10215449 - CALM3 chr19 47109084 + Exonic hg19 LGG TCGA-HT-8104 9 13 In-Frame Inter-chr p15.4 q13.32 Seq+ 32086 ChimerSeq STARFusion TCGA_RNA-Seq ERBB3-EGFR ERBB3 chr12 56492359 + EGFR chr7 55266410 + Exonic hg19 LGG TCGA-HT-8104 10 1 In-Frame Inter-chr q13.2 Oncogene p11.2 TK:EGFR Oncogene 32087 ChimerSeq STARFusion TCGA_RNA-Seq NCALD-LAPTM4B NCALD chr8 102928037 - LAPTM4B chr8 98817581 + Exonic hg19 LGG TCGA-HT-8106 4 32 5'UTR-CDS Intra-chr q22.3 q22.1 Seq+ 32088 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-IGH@ TPT1 chr13 45915219 - IGH@ chr14 106237746 - Exonic hg19 LGG TCGA-HT-8106 9 0 Out-of-frame Inter-chr q14.13 32.33 32089 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-IGHG3 TPT1 chr13 45915219 - IGHG3 chr14 106237746 - Exonic hg19 LGG TCGA-HT-8106 9 0 Out-of-frame Inter-chr q14.13 32090 ChimerSeq STARFusion TCGA_RNA-Seq COLEC12-CLUL1 COLEC12 chr18 357400 - CLUL1 chr18 606978 + Exonic hg19 LGG TCGA-HT-8106 5 12 CDS-5'UTR Intra-chr p11.32 p11.32 Seq+ 32091 ChimerSeq STARFusion TCGA_RNA-Seq USP46-PDGFRA USP46 chr4 53525282 - PDGFRA chr4 55140698 + Exonic hg19 LGG TCGA-CS-6665 158 718 Out-of-frame Intra-chr q12 q12 Oncogene Seq+ 32092 ChimerSeq STARFusion TCGA_RNA-Seq USP46-PDGFRA USP46 chr4 53524341 - PDGFRA chr4 55140698 + Exonic hg19 LGG TCGA-CS-6665 32 710 5'UTR-CDS Intra-chr q12 q12 Oncogene Seq+ 32093 ChimerSeq STARFusion TCGA_RNA-Seq DCUN1D4-SGCB DCUN1D4 chr4 52709433 + SGCB chr4 52899806 - Exonic hg19 LGG TCGA-CS-6665 22 93 Out-of-frame Intra-chr q12 q12 Seq+ 32094 ChimerSeq STARFusion TCGA_RNA-Seq TMEM165-PDGFRA TMEM165 chr4 56262563 + PDGFRA chr4 55133456 + Exonic hg19 LGG TCGA-CS-6665 5 15 In-Frame Intra-chr q12 q12 Oncogene Seq+ 32095 ChimerSeq STARFusion TCGA_RNA-Seq USP46-SCFD2 USP46 chr4 53525282 - SCFD2 chr4 53752033 - Exonic hg19 LGG TCGA-CS-6665 3 11 In-Frame Intra-chr q12 q12 Seq+ 32096 ChimerSeq STARFusion TCGA_RNA-Seq SFI1-LIMK2 SFI1 chr22 31904362 + LIMK2 chr22 31654277 + Exonic hg19 LGG TCGA-CS-6666 2 21 In-Frame Intra-chr q12.2 q12.2 TKL:LISK Seq+ 32097 ChimerSeq STARFusion TCGA_RNA-Seq DRG1-LIMK2 DRG1 chr22 31904362 + LIMK2 chr22 31654277 + Exonic hg19 LGG TCGA-CS-6666 2 15 3'UTR-CDS Intra-chr q12.2 Tumor suppressor gene q12.2 TKL:LISK 32098 ChimerSeq STARFusion TCGA_RNA-Seq FBXW7-TMEM126B FBXW7 chr4 153456093 - TMEM126B chr11 85345130 + Exonic hg19 LGG TCGA-CS-6666 3 9 5'UTR-CDS Inter-chr q31.3 Oncogene Tumor suppressor gene q14.1 Seq+ 32099 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB7C-FBXO15 ZBTB7C chr18 45864545 - FBXO15 chr18 71740965 - Exonic hg19 LGG TCGA-CS-6666 3 4 5'UTR-CDS Intra-chr q21.1 Tumor suppressor gene Transcription factor q22.3 Seq+ 32100 ChimerSeq STARFusion TCGA_RNA-Seq HDAC4-BRAT1 HDAC4 chr2 240002791 - BRAT1 chr7 2594081 - Exonic hg19 LGG TCGA-CS-6666 2 7 CDS-5'UTR Inter-chr q37.3 p22.3 Seq+ 32101 ChimerSeq STARFusion TCGA_RNA-Seq NFASC-PPP1R12B NFASC chr1 204957934 + PPP1R12B chr1 202531906 + Exonic hg19 LGG TCGA-FG-6688 11 54 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 32102 ChimerSeq STARFusion TCGA_RNA-Seq RPL38-BCAS3 RPL38 chr17 72200329 + BCAS3 chr17 58979981 + Exonic hg19 LGG TCGA-HT-7479 4 15 Out-of-frame Intra-chr q25.1 q23.2 Seq+ 32103 ChimerSeq STARFusion TCGA_RNA-Seq WDR49-VEPH1 WDR49 chr3 167277852 - VEPH1 chr3 157099165 - Exonic hg19 LGG TCGA-HT-7470 3 13 In-Frame Intra-chr q26.1 q25.32 Seq+ 32104 ChimerSeq STARFusion TCGA_RNA-Seq ID4-GFAP ID4 chr6 19837952 + GFAP chr17 42983521 - Exonic hg19 LGG TCGA-HT-7473 3 5 Out-of-frame Inter-chr p22.3 Tumor suppressor gene q21.31 32105 ChimerSeq STARFusion TCGA_RNA-Seq TET2-ADH6 TET2 chr4 106111662 + ADH6 chr4 100140503 - Exonic hg19 LGG TCGA-HT-7472 3 21 5'UTR-5'UTR Intra-chr q24 Oncogene Tumor suppressor gene Transcription factor q23 Seq+ 32106 ChimerSeq STARFusion TCGA_RNA-Seq BTBD2-LINGO3 BTBD2 chr19 2015296 - LINGO3 chr19 2291821 - Exonic hg19 LGG TCGA-HT-7475 3 16 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 32107 ChimerSeq STARFusion TCGA_RNA-Seq FNIP2-FAM159A FNIP2 chr4 159690471 + FAM159A chr1 53108535 + Exonic hg19 LGG TCGA-HT-7475 3 6 In-Frame Inter-chr q32.1 p32.3 Seq+ 32108 ChimerSeq STARFusion TCGA_RNA-Seq BOP1-NIPAL2 BOP1 chr8 145514954 - NIPAL2 chr8 99234828 - Exonic hg19 LGG TCGA-HT-7475 2 8 Out-of-frame Intra-chr q24.3 q22.2 Seq+ 32109 ChimerSeq STARFusion TCGA_RNA-Seq PBRM1-KYNU PBRM1 chr3 52692215 - KYNU chr2 143742653 + Exonic hg19 LGG TCGA-HT-7477 21 97 In-Frame Inter-chr p21.1 Oncogene Tumor suppressor gene q22.2 Seq+ 32110 ChimerSeq STARFusion TCGA_RNA-Seq ZNF804A-IRF2 ZNF804A chr2 185463797 + IRF2 chr4 185350224 - Exonic hg19 LGG TCGA-HT-7477 20 97 CDS-5'UTR Inter-chr q32.1 Transcription factor q35.1 Transcription factor Seq+ 32111 ChimerSeq STARFusion TCGA_RNA-Seq MIER3-PDE4D MIER3 chr5 56246455 - PDE4D chr5 58489362 - Exonic hg19 LGG TCGA-HT-7477 9 1 Out-of-frame Intra-chr q11.2 q12.1 Seq+ 32112 ChimerSeq STARFusion TCGA_RNA-Seq LNX1-PPAT LNX1 chr4 54424041 - PPAT chr4 57343937 - Exonic hg19 LGG TCGA-HT-7477 3 19 CDS-5'UTR Intra-chr q12 q12 32113 ChimerSeq STARFusion TCGA_RNA-Seq ITGA4-UBE2E2 ITGA4 chr2 182323044 + UBE2E2 chr3 23541099 + Exonic hg19 LGG TCGA-HT-7477 5 6 Out-of-frame Inter-chr q31.3 p24.3 Seq+ 32114 ChimerSeq STARFusion TCGA_RNA-Seq DNAJA1-GALNTL6 DNAJA1 chr9 33030665 + GALNTL6 chr4 173930329 + Exonic hg19 LGG TCGA-HT-7477 2 5 Out-of-frame Inter-chr p21.1 q34.1 Seq+ 32115 ChimerSeq STARFusion TCGA_RNA-Seq KRT8P1-GFAP KRT8P1 chr14 39197440 + GFAP chr17 42988023 - Exonic hg19 LGG TCGA-HT-A5R5 9 2 Out-of-frame Inter-chr q21.1 q21.31 32116 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1211-SCFD2 KIAA1211 chr4 57045596 + SCFD2 chr4 53773758 - Exonic hg19 LGG TCGA-HT-A5R7 25 176 5'UTR-CDS Intra-chr q12 q12 Seq+ 32117 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1211-SCFD2 KIAA1211 chr4 57045596 + SCFD2 chr4 53752033 - Exonic hg19 LGG TCGA-HT-A5R7 3 170 5'UTR-CDS Intra-chr q12 q12 Seq+ 32118 ChimerSeq STARFusion TCGA_RNA-Seq HYOU1-NLRX1 HYOU1 chr11 118915839 - NLRX1 chr11 119042065 + Exonic hg19 LGG TCGA-HW-8321 4 19 3'UTR-5'UTR Intra-chr q23.3 Seq+ 32119 ChimerSeq STARFusion TCGA_RNA-Seq OGFOD3-WDR45B OGFOD3 chr17 80369331 - WDR45B chr17 80585167 - Exonic hg19 LGG TCGA-HW-8321 6 11 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 32120 ChimerSeq STARFusion TCGA_RNA-Seq WDR45B-OGFOD3 WDR45B chr17 80601825 - OGFOD3 chr17 80373503 - Exonic hg19 LGG TCGA-HW-8321 3 7 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 32121 ChimerSeq STARFusion TCGA_RNA-Seq PFKL-AIRE PFKL chr21 45720073 + AIRE chr21 45717539 + Exonic hg19 LGG TCGA-HW-7490 6 3 Out-of-frame Intra-chr q22.3 q22.3 Transcription factor Seq+ 32122 ChimerSeq STARFusion TCGA_RNA-Seq PEAK1-LINGO1 PEAK1 chr15 77425347 - LINGO1 chr15 77983243 - Exonic hg19 LGG TCGA-HW-7495 3 6 CDS-5'UTR Intra-chr q24.3 q24.3 32123 ChimerSeq STARFusion TCGA_RNA-Seq SCARB1-RIMBP2 SCARB1 chr12 125270903 - RIMBP2 chr12 131002462 - Exonic hg19 LGG TCGA-WY-A85A 2 5 CDS-5'UTR Intra-chr q24.31 q24.33 Seq+ 32124 ChimerSeq STARFusion TCGA_RNA-Seq VPS52-ZNF358 VPS52 chr6 33231261 - ZNF358 chr19 7584091 + Exonic hg19 LGG TCGA-TM-A7CF 25 70 CDS-5'UTR Inter-chr p13.2 Transcription factor Seq+ 32125 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB7A-CYP4F3 ZBTB7A chr19 4044973 - CYP4F3 chr19 15772046 + Exonic hg19 LGG TCGA-TM-A7CF 6 44 Out-of-frame Intra-chr p13.3 Transcription factor p13.12 Seq+ 32126 ChimerSeq STARFusion TCGA_RNA-Seq GNG7-LSM7 GNG7 chr19 2702644 - LSM7 chr19 2324195 - Exonic hg19 LGG TCGA-TM-A7CF 14 11 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 32127 ChimerSeq STARFusion TCGA_RNA-Seq FZR1-TBC1D17 FZR1 chr19 3532648 + TBC1D17 chr19 50390733 + Exonic hg19 LGG TCGA-TM-A7CF 9 22 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene q13.33 Seq+ 32128 ChimerSeq STARFusion TCGA_RNA-Seq C19orf10-FAM187B C19orf10 chr19 4659943 - FAM187B chr19 35716115 - Exonic hg19 LGG TCGA-TM-A7CF 5 22 Out-of-frame Intra-chr q13.12 Seq+ 32129 ChimerSeq STARFusion TCGA_RNA-Seq LRRC1-SH3GL1 LRRC1 chr6 53707025 + SH3GL1 chr19 4366991 - Exonic hg19 LGG TCGA-TM-A7CF 7 14 Out-of-frame Inter-chr p12.1 p13.3 Seq+ 32130 ChimerSeq STARFusion TCGA_RNA-Seq SCAF1-ETV7 SCAF1 chr19 50150087 + ETV7 chr6 36341355 - Exonic hg19 LGG TCGA-TM-A7CF 5 18 In-Frame Inter-chr q13.33 p21.31 Transcription factor Seq+ 32131 ChimerSeq STARFusion TCGA_RNA-Seq VEGFA-STK38 VEGFA chr6 43745402 + STK38 chr6 36467767 - Exonic hg19 LGG TCGA-TM-A7CF 6 11 In-Frame Intra-chr p21.1 Tumor suppressor gene p21.31 Seq+ 32132 ChimerSeq STARFusion TCGA_RNA-Seq PEX6-GNMT PEX6 chr6 42932032 - GNMT chr6 42931273 + Exonic hg19 LGG TCGA-TM-A7CF 5 12 3'UTR-CDS Intra-chr p21.1 p21.1 Tumor suppressor gene 32133 ChimerSeq STARFusion TCGA_RNA-Seq SH3GL1-RUVBL2 SH3GL1 chr19 4390049 - RUVBL2 chr19 49514256 + Exonic hg19 LGG TCGA-TM-A7CF 7 4 Out-of-frame Intra-chr p13.3 q13.33 Seq+ 32134 ChimerSeq STARFusion TCGA_RNA-Seq RANBP3-ALDH16A1 RANBP3 chr19 5978072 - ALDH16A1 chr19 49961743 + Exonic hg19 LGG TCGA-TM-A7CF 6 1 Out-of-frame Intra-chr p13.3 q13.33 Seq+ 32135 ChimerSeq STARFusion TCGA_RNA-Seq GNG7-LSM7 GNG7 chr19 2702644 - LSM7 chr19 2324191 - Exonic hg19 LGG TCGA-TM-A7CF 3 11 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 32136 ChimerSeq STARFusion TCGA_RNA-Seq ZNF292-GRM4 ZNF292 chr6 87865477 + GRM4 chr6 34101636 - Exonic hg19 LGG TCGA-TM-A7CF 3 11 CDS-5'UTR Intra-chr q14.3 Tumor suppressor gene Transcription factor p21.31 Seq+ 32137 ChimerSeq STARFusion TCGA_RNA-Seq NCAN-NOSIP NCAN chr19 19345905 + NOSIP chr19 50063949 - Exonic hg19 LGG TCGA-TM-A7CF 4 6 CDS-5'UTR Intra-chr p13.11 q13.33 Seq+ 32138 ChimerSeq STARFusion TCGA_RNA-Seq TAF8-COL5A3 TAF8 chr6 42044977 + COL5A3 chr19 10116907 - Exonic hg19 LGG TCGA-TM-A7CF 4 5 Out-of-frame Inter-chr p21.1 p13.2 Seq+ 32139 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-CLEC4M SBNO2 chr19 1147308 - CLEC4M chr19 7830524 + Exonic hg19 LGG TCGA-TM-A7CF 2 12 Out-of-frame Intra-chr p13.3 p13.2 Seq+ 32140 ChimerSeq STARFusion TCGA_RNA-Seq GNMT-PSPN GNMT chr6 42931414 + PSPN chr19 6375286 - Exonic hg19 LGG TCGA-TM-A7CF 3 7 Out-of-frame Inter-chr p21.1 Tumor suppressor gene p13.3 32141 ChimerSeq STARFusion TCGA_RNA-Seq EYS-STX11 EYS chr6 65596590 - STX11 chr6 144507760 + Exonic hg19 LGG TCGA-TM-A7CF 3 4 CDS-5'UTR Intra-chr q12 q24.2 Seq+ 32142 ChimerSeq STARFusion TCGA_RNA-Seq EYS-CAMSAP3 EYS chr6 65300116 - CAMSAP3 chr19 7670112 + Exonic hg19 LGG TCGA-TM-A7CF 2 6 In-Frame Inter-chr q12 p13.2 32143 ChimerSeq STARFusion TCGA_RNA-Seq ZNF253-HSD17B14 ZNF253 chr19 19976808 + HSD17B14 chr19 49337615 - Exonic hg19 LGG TCGA-TM-A7CF 2 6 Out-of-frame Intra-chr p13.11 Transcription factor q13.33 Seq+ 32144 ChimerSeq STARFusion TCGA_RNA-Seq PALM-IGFL2 PALM chr19 709151 + IGFL2 chr19 46663672 + Exonic hg19 LGG TCGA-TM-A7CF 2 5 Out-of-frame Intra-chr p13.3 q13.32 32145 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75011521 - TTC18 chr10 75016174 - Exonic hg19 LGG TCGA-TM-A7CA 31 111 Out-of-frame Intra-chr q22.2 32146 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010573 - TTC18 chr10 75016174 - Exonic hg19 LGG TCGA-TM-A7CA 16 107 3'UTR-CDS Intra-chr q22.2 32147 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010683 - TTC18 chr10 75016175 - Exonic hg19 LGG TCGA-TM-A7CA 12 107 Out-of-frame Intra-chr q22.2 32148 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010596 - TTC18 chr10 75016174 - Exonic hg19 LGG TCGA-TM-A7CA 7 107 3'UTR-CDS Intra-chr q22.2 32149 ChimerSeq STARFusion TCGA_RNA-Seq TCHH-GFAP TCHH chr1 152084650 - GFAP chr17 42988823 - Exonic hg19 LGG TCGA-TM-A84C 16 0 Out-of-frame Inter-chr q21.3 q21.31 32150 ChimerSeq STARFusion TCGA_RNA-Seq CST3-GFAP CST3 chr20 23618371 - GFAP chr17 42983740 - Exonic hg19 LGG TCGA-TM-A84C 3 16 Out-of-frame Inter-chr p11.21 q21.31 32151 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-FBXO28 FGFR3 chr4 1808661 + FBXO28 chr1 224340844 + Exonic hg19 LGG TCGA-TM-A84B 335 1829 In-Frame Inter-chr p16.3 TK:FGFR Oncogene q42.11 Seq+ 32152 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM2-KIF5A R3HDM2 chr12 57789532 - KIF5A chr12 57957222 + Exonic hg19 LGG TCGA-TM-A84B 223 785 5'UTR-CDS Intra-chr q13.3 q13.3 Seq+ 32153 ChimerSeq STARFusion TCGA_RNA-Seq ADCYAP1R1-AQP1 ADCYAP1R1 chr7 31092293 + AQP1 chr7 30961681 + Exonic hg19 LGG TCGA-TM-A84B 181 361 5'UTR-CDS Intra-chr p14.3 p14.3 Seq+ 32154 ChimerSeq STARFusion TCGA_RNA-Seq ADCYAP1R1-AQP1 ADCYAP1R1 chr7 31092293 + AQP1 chr7 30961681 + Exonic hg19 LGG TCGA-TM-A84B 181 341 5'UTR-CDS Intra-chr p14.3 p14.3 Seq+ 32155 ChimerSeq STARFusion TCGA_RNA-Seq METTL21B-GLI1 METTL21B chr12 58166911 + GLI1 chr12 57857448 + Exonic hg19 LGG TCGA-TM-A84B 106 525 CDS-5'UTR Intra-chr q13.3 Tumor suppressor gene Transcription factor Seq+ 32156 ChimerSeq STARFusion TCGA_RNA-Seq TMOD3-TACC3 TMOD3 chr15 52161570 + TACC3 chr4 1746245 + Exonic hg19 LGG TCGA-TM-A84B 133 276 Out-of-frame Inter-chr q21.2 p16.3 Seq+ 32157 ChimerSeq STARFusion TCGA_RNA-Seq METTL21B-GLI1 METTL21B chr12 58166911 + GLI1 chr12 57858456 + Exonic hg19 LGG TCGA-TM-A84B 45 522 In-Frame Intra-chr q13.3 Tumor suppressor gene Transcription factor Seq+ 32158 ChimerSeq STARFusion TCGA_RNA-Seq ZNF345-LGALS13 ZNF345 chr19 37342806 + LGALS13 chr19 40095818 + Exonic hg19 LGG TCGA-TM-A84B 71 318 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.2 Seq+ 32159 ChimerSeq STARFusion TCGA_RNA-Seq ZNF529-IGSF23 ZNF529 chr19 37096028 - IGSF23 chr19 45127000 + Exonic hg19 LGG TCGA-TM-A84B 61 336 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.31 Seq+ 32160 ChimerSeq STARFusion TCGA_RNA-Seq ADCYAP1R1-AQP1 ADCYAP1R1 chr7 31092293 + AQP1 chr7 30961296 + Exonic hg19 LGG TCGA-TM-A84B 33 360 5'UTR-5'UTR Intra-chr p14.3 p14.3 Seq+ 32161 ChimerSeq STARFusion TCGA_RNA-Seq ZNF345-LGALS13 ZNF345 chr19 37342806 + LGALS13 chr19 40097863 + Exonic hg19 LGG TCGA-TM-A84B 21 316 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.2 Seq+ 32162 ChimerSeq STARFusion TCGA_RNA-Seq ZNF345-LGALS13 ZNF345 chr19 37342806 + LGALS13 chr19 40095831 + Exonic hg19 LGG TCGA-TM-A84B 21 316 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.2 Seq+ 32163 ChimerSeq STARFusion TCGA_RNA-Seq TMOD3-TACC3 TMOD3 chr15 52161569 + TACC3 chr4 1746243 + Exonic hg19 LGG TCGA-TM-A84B 15 269 Out-of-frame Inter-chr q21.2 p16.3 Seq+ 32164 ChimerSeq STARFusion TCGA_RNA-Seq PAK4-SCGB1B2P PAK4 chr19 39616559 + SCGB1B2P chr19 35068637 - Exonic hg19 LGG TCGA-TM-A84B 32 125 5'UTR-5'UTR Intra-chr q13.2 STE:STE20 q13.11 Seq+ 32165 ChimerSeq STARFusion TCGA_RNA-Seq PAK4-SCGB1B2P PAK4 chr19 39616559 + SCGB1B2P chr19 35068361 - Exonic hg19 LGG TCGA-TM-A84B 4 125 5'UTR-3'UTR Intra-chr q13.2 STE:STE20 q13.11 Seq+ 32166 ChimerSeq STARFusion TCGA_RNA-Seq TNIK-KCNMB2 TNIK chr3 171087409 - KCNMB2 chr3 178525131 + Exonic hg19 LGG TCGA-TM-A84B 9 30 CDS-5'UTR Intra-chr q26.31 STE:STE20 q26.32 Seq+ 32167 ChimerSeq STARFusion TCGA_RNA-Seq WDR62-TRAPPC6A WDR62 chr19 36580208 + TRAPPC6A chr19 45668228 - Exonic hg19 LGG TCGA-TM-A84B 6 18 In-Frame Intra-chr q13.12 q13.32 Seq+ 32168 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHO2-TRIP4 PLEKHO2 chr15 65153774 + TRIP4 chr15 64737205 + Exonic hg19 LGG TCGA-TM-A84B 5 21 In-Frame Intra-chr q22.31 q22.31 Seq+ 32169 ChimerSeq STARFusion TCGA_RNA-Seq PLA2G16-SGPP2 PLA2G16 chr11 63357572 - SGPP2 chr2 223339287 + Exonic hg19 LGG TCGA-TM-A84B 5 16 In-Frame Inter-chr q13.1 Tumor suppressor gene q36.1 Seq+ 32170 ChimerSeq STARFusion TCGA_RNA-Seq WDR62-TRAPPC6A WDR62 chr19 36580208 + TRAPPC6A chr19 45668452 - Exonic hg19 LGG TCGA-TM-A84B 2 18 Out-of-frame Intra-chr q13.12 q13.32 Seq+ 32171 ChimerSeq STARFusion TCGA_RNA-Seq TNIK-DGCR8 TNIK chr3 170841385 - DGCR8 chr22 20093700 + Exonic hg19 LGG TCGA-TM-A84B 2 8 Out-of-frame Inter-chr q26.31 STE:STE20 q11.21 Seq+ 32172 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1732899 + Exonic hg19 LGG TCGA-P5-A72U 360 1321 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 32173 ChimerSeq STARFusion TCGA_RNA-Seq GIGYF2-NGEF GIGYF2 chr2 233684695 + NGEF chr2 233759626 - Exonic hg19 LGG TCGA-P5-A72U 34 90 In-Frame Intra-chr q37.1 q37.1 Seq+ 32174 ChimerSeq STARFusion TCGA_RNA-Seq DCTN2-DENND3 DCTN2 chr12 57925798 - DENND3 chr8 142160933 + Exonic hg19 LGG TCGA-P5-A72U 6 59 Out-of-frame Inter-chr q13.3 q24.3 Seq+ 32175 ChimerSeq STARFusion TCGA_RNA-Seq CHCHD3-C7orf73 CHCHD3 chr7 132709306 - C7orf73 chr7 135357501 + Exonic hg19 LGG TCGA-P5-A72U 11 35 Out-of-frame Intra-chr q33 Transcription factor q33 Seq+ 32176 ChimerSeq STARFusion TCGA_RNA-Seq CHCHD3-NUP205 CHCHD3 chr7 132709306 - NUP205 chr7 135333152 + Exonic hg19 LGG TCGA-P5-A72U 6 23 Out-of-frame Intra-chr q33 Transcription factor q33 Seq+ 32177 ChimerSeq STARFusion TCGA_RNA-Seq TCHH-GFAP TCHH chr1 152084328 - GFAP chr17 42988825 - Exonic hg19 LGG TCGA-P5-A72W 8 1 Out-of-frame Inter-chr q21.3 q21.31 32178 ChimerSeq STARFusion TCGA_RNA-Seq COL18A1-LINC00316 COL18A1 chr21 46825388 + LINC00316 chr21 46758793 - Exonic hg19 LGG TCGA-P5-A72W 4 4 Out-of-frame Intra-chr q22.3 q22.3 32179 ChimerSeq STARFusion TCGA_RNA-Seq KCNB1-ZFPM2 KCNB1 chr20 48098451 - ZFPM2 chr8 106431372 + Exonic hg19 LGG TCGA-TM-A84H 4 10 Out-of-frame Inter-chr q13.13 q22.3 Transcription factor Seq+ 32180 ChimerSeq STARFusion TCGA_RNA-Seq B3GALT5-IGSF5 B3GALT5 chr21 40977152 + IGSF5 chr21 41137462 + Exonic hg19 LGG TCGA-TM-A84H 3 7 5'UTR-CDS Intra-chr q22.2 q22.2 32181 ChimerSeq STARFusion TCGA_RNA-Seq TRPC4AP-KCNB1 TRPC4AP chr20 33657099 - KCNB1 chr20 47991529 - Exonic hg19 LGG TCGA-TM-A84H 2 9 In-Frame Intra-chr q11.22 q13.13 Seq+ 32182 ChimerSeq STARFusion TCGA_RNA-Seq SCD-SEC61A2 SCD chr10 102116521 + SEC61A2 chr10 12191594 + Exonic hg19 LGG TCGA-TM-A84J 473 926 In-Frame Intra-chr q24.31 p14 Seq+ 32183 ChimerSeq STARFusion TCGA_RNA-Seq PDGFB-DGCR2 PDGFB chr22 39626089 - DGCR2 chr22 19077003 - Exonic hg19 LGG TCGA-TM-A84J 141 514 In-Frame Intra-chr q13.1 Oncogene q11.21 Seq+ 32184 ChimerSeq STARFusion TCGA_RNA-Seq ZNF239-SEC31B ZNF239 chr10 44063347 - SEC31B chr10 102257037 - Exonic hg19 LGG TCGA-TM-A84J 79 243 5'UTR-CDS Intra-chr q11.21 Transcription factor q24.31 Seq+ 32185 ChimerSeq STARFusion TCGA_RNA-Seq ZNF239-SEC31B ZNF239 chr10 44063347 - SEC31B chr10 102257444 - Exonic hg19 LGG TCGA-TM-A84J 10 240 5'UTR-CDS Intra-chr q11.21 Transcription factor q24.31 Seq+ 32186 ChimerSeq STARFusion TCGA_RNA-Seq ZNF239-SEC31B ZNF239 chr10 44069085 - SEC31B chr10 102257037 - Exonic hg19 LGG TCGA-TM-A84J 9 240 5'UTR-CDS Intra-chr q11.21 Transcription factor q24.31 Seq+ 32187 ChimerSeq STARFusion TCGA_RNA-Seq EPHB2-NTRK1 EPHB2 chr1 23111569 + NTRK1 chr1 156843425 + Exonic hg19 LGG TCGA-TM-A84J 27 167 In-Frame Intra-chr p36.12 Tumor suppressor gene q23.1 Oncogene Seq+ 32188 ChimerSeq STARFusion TCGA_RNA-Seq CWF19L1-HSPA12A CWF19L1 chr10 102027328 - HSPA12A chr10 118466796 - Exonic hg19 LGG TCGA-TM-A84J 24 103 Out-of-frame Intra-chr q24.31 q25.3 Seq+ 32189 ChimerSeq STARFusion TCGA_RNA-Seq CCT3-ZBTB40 CCT3 chr1 156278994 - ZBTB40 chr1 22816373 + Exonic hg19 LGG TCGA-TM-A84J 25 75 CDS-5'UTR Intra-chr q22 p36.12 Transcription factor Seq+ 32190 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB40-PRCC ZBTB40 chr1 22778497 + PRCC chr1 156752074 + Exonic hg19 LGG TCGA-TM-A84J 26 47 5'UTR-CDS Intra-chr p36.12 Transcription factor q23.1 Seq+ 32191 ChimerSeq STARFusion TCGA_RNA-Seq NPTXR-PDXP NPTXR chr22 39239240 - PDXP chr22 38061562 + Exonic hg19 LGG TCGA-TM-A84J 13 42 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 32192 ChimerSeq STARFusion TCGA_RNA-Seq NPTXR-SH3BP1 NPTXR chr22 39239240 - SH3BP1 chr22 38061562 + Exonic hg19 LGG TCGA-TM-A84J 13 42 CDS-3'UTR Intra-chr q13.1 q13.1 Seq+ 32193 ChimerSeq STARFusion TCGA_RNA-Seq TOM1-IGL@ TOM1 chr22 35719170 + IGL@ chr22 23101393 + Exonic hg19 LGG TCGA-TM-A84J 11 46 Out-of-frame Intra-chr q12.3 q11.22 32194 ChimerSeq STARFusion TCGA_RNA-Seq PLXNB2-SMPD4P1 PLXNB2 chr22 50721766 - SMPD4P1 chr22 20968022 - Exonic hg19 LGG TCGA-TM-A84J 8 40 Out-of-frame Intra-chr q13.33 q11.21 Seq+ 32195 ChimerSeq STARFusion TCGA_RNA-Seq PLXNB2-SMPD4P1 PLXNB2 chr22 50721479 - SMPD4P1 chr22 20968022 - Exonic hg19 LGG TCGA-TM-A84J 6 39 Out-of-frame Intra-chr q13.33 q11.21 Seq+ 32196 ChimerSeq STARFusion TCGA_RNA-Seq LUZP1-SORL1 LUZP1 chr1 23495259 - SORL1 chr11 121340716 + Exonic hg19 LGG TCGA-TM-A84J 10 17 5'UTR-CDS Inter-chr p36.12 q24.1 Seq+ 32197 ChimerSeq STARFusion TCGA_RNA-Seq CABIN1-CHEK2P4 CABIN1 chr22 24407817 + CHEK2P4 chr22 16989052 + Exonic hg19 LGG TCGA-TM-A84J 5 28 Out-of-frame Intra-chr q11.1 Seq+ 32198 ChimerSeq STARFusion TCGA_RNA-Seq TOM1-IGL@ TOM1 chr22 35719170 + IGL@ chr22 23040599 + Exonic hg19 LGG TCGA-TM-A84J 3 36 Out-of-frame Intra-chr q12.3 q11.22 32199 ChimerSeq STARFusion TCGA_RNA-Seq TOM1-IGL@ TOM1 chr22 35719170 + IGL@ chr22 23165476 + Exonic hg19 LGG TCGA-TM-A84J 3 36 Out-of-frame Intra-chr q12.3 q11.22 32200 ChimerSeq STARFusion TCGA_RNA-Seq MEF2D-SORL1 MEF2D chr1 156470278 - SORL1 chr11 121424646 + Exonic hg19 LGG TCGA-TM-A84J 4 10 5'UTR-CDS Inter-chr q22 Transcription factor q24.1 Seq+ 32201 ChimerSeq STARFusion TCGA_RNA-Seq NPTXR-LGALS1 NPTXR chr22 39239240 - LGALS1 chr22 38072993 + Exonic hg19 LGG TCGA-TM-A84J 2 11 In-Frame Intra-chr q13.1 q13.1 Seq+ 32202 ChimerSeq STARFusion TCGA_RNA-Seq TNR-RFWD2 TNR chr1 175497405 - RFWD2 chr1 175958615 - Exonic hg19 LGG TCGA-TQ-A7RU 9 6 5'UTR-CDS Intra-chr q25.1 q25.2 Tumor suppressor gene Seq+ 32203 ChimerSeq STARFusion TCGA_RNA-Seq B3GALT5-IGSF5 B3GALT5 chr21 40977152 + IGSF5 chr21 41137462 + Exonic hg19 LGG TCGA-TM-A84T 2 6 5'UTR-CDS Intra-chr q22.2 q22.2 32204 ChimerSeq STARFusion TCGA_RNA-Seq ERBB3-EGFR ERBB3 chr12 56492359 + EGFR chr7 55266410 + Exonic hg19 LGG TCGA-DU-7292 11 0 In-Frame Inter-chr q13.2 Oncogene p11.2 TK:EGFR Oncogene 32205 ChimerSeq STARFusion TCGA_RNA-Seq NFASC-ATP2B4 NFASC chr1 204957934 + ATP2B4 chr1 203708674 + Exonic hg19 LGG TCGA-DU-7292 4 23 In-Frame Intra-chr q32.1 q32.1 Seq+ 32206 ChimerSeq STARFusion TCGA_RNA-Seq NFASC-ATP2B4 NFASC chr1 204957934 + ATP2B4 chr1 203702351 + Exonic hg19 LGG TCGA-DU-7292 3 23 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 32207 ChimerSeq STARFusion TCGA_RNA-Seq TMCC2-MNAT1 TMCC2 chr1 205211172 + MNAT1 chr14 61262935 + Exonic hg19 LGG TCGA-TM-A7C3 7 84 Out-of-frame Inter-chr q32.1 q23.1 Seq+ 32208 ChimerSeq STARFusion TCGA_RNA-Seq TMCC2-MNAT1 TMCC2 chr1 205211172 + MNAT1 chr14 61346432 + Exonic hg19 LGG TCGA-TM-A7C3 2 83 In-Frame Inter-chr q32.1 q23.1 Seq+ 32209 ChimerSeq STARFusion TCGA_RNA-Seq GPBP1L1-PVR GPBP1L1 chr1 46124700 - PVR chr19 45153081 + Exonic hg19 LGG TCGA-TM-A7C3 4 21 Out-of-frame Inter-chr p34.1 Transcription factor q13.31 Seq+ 32210 ChimerSeq STARFusion TCGA_RNA-Seq NOVA1-DTD2 NOVA1 chr14 27018886 - DTD2 chr14 31922550 - Exonic hg19 LGG TCGA-TM-A7C3 3 24 Out-of-frame Intra-chr q12 q12 Seq+ 32211 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R3C-SPTSSA PPP2R3C chr14 35568458 - SPTSSA chr14 34904510 - Exonic hg19 LGG TCGA-TM-A7C3 3 17 In-Frame Intra-chr q13.2 q13.1 Seq+ 32212 ChimerSeq STARFusion TCGA_RNA-Seq NOVA1-DTD2 NOVA1 chr14 27064616 - DTD2 chr14 31922550 - Exonic hg19 LGG TCGA-TM-A7C3 3 16 Out-of-frame Intra-chr q12 q12 Seq+ 32213 ChimerSeq STARFusion TCGA_RNA-Seq KIF5A-TSPAN31 KIF5A chr12 57958756 + TSPAN31 chr12 58140372 + Exonic hg19 LGG TCGA-TM-A7C3 2 16 In-Frame Intra-chr q13.3 q14.1 Seq+ 32214 ChimerSeq STARFusion TCGA_RNA-Seq KIF5A-TSPAN31 KIF5A chr12 57944183 + TSPAN31 chr12 58140372 + Exonic hg19 LGG TCGA-TM-A7C3 2 16 In-Frame Intra-chr q13.3 q14.1 Seq+ 32215 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-SYAP1 DHRSX chrX 2209543 - SYAP1 chrX 16753350 + Exonic hg19 LGG TCGA-DU-7299 24 75 Out-of-frame Intra-chr p22.33 p22.2 Seq+ 32216 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-SYAP1 DHRSX chrY 2159543 - SYAP1 chrX 16753350 + Exonic hg19 LGG TCGA-DU-7299 12 37 Out-of-frame Inter-chr p22.33 p22.2 Seq+ 32217 ChimerSeq STARFusion TCGA_RNA-Seq SPIDR-KCNB2 SPIDR chr8 48206619 + KCNB2 chr8 73479877 + Exonic hg19 LGG TCGA-DU-7299 2 25 Out-of-frame Intra-chr q11.21 q21.11 Seq+ 32218 ChimerSeq STARFusion TCGA_RNA-Seq UBR1-TTBK2 UBR1 chr15 43258351 - TTBK2 chr15 43132631 - Exonic hg19 LGG TCGA-HT-7902 6 15 In-Frame Intra-chr q15.2 q15.2 CK1:TTBK Seq+ 32219 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-PIP5K1P1 KCTD20 chr6 36457998 + PIP5K1P1 chr6 7987765 + Exonic hg19 LGG TCGA-S9-A7IZ 10 0 Out-of-frame Intra-chr p21.31 p24.3 32220 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D4-EDNRB TBC1D4 chr13 75933905 - EDNRB chr13 78472469 - Exonic hg19 LGG TCGA-S9-A7IZ 6 16 In-Frame Intra-chr q22.2 q22.3 Tumor suppressor gene 32221 ChimerSeq STARFusion TCGA_RNA-Seq EDNRB-TBC1D4 EDNRB chr13 78473994 - TBC1D4 chr13 75936743 - Exonic hg19 LGG TCGA-S9-A7IZ 5 16 In-Frame Intra-chr q22.3 Tumor suppressor gene q22.2 32222 ChimerSeq STARFusion TCGA_RNA-Seq KANSL2-HMGB1P5 KANSL2 chr12 49048741 - HMGB1P5 chr3 22423234 + Exonic hg19 LGG TCGA-E1-A7YQ 4 37 Out-of-frame Inter-chr q13.11 p24.3 32223 ChimerSeq STARFusion TCGA_RNA-Seq HMGB1-KANSL2 HMGB1 chr13 31035403 - KANSL2 chr12 49047958 - Exonic hg19 LGG TCGA-E1-A7YQ 3 15 3'UTR-CDS Inter-chr q12.3 q13.11 32224 ChimerSeq STARFusion TCGA_RNA-Seq CLU-MTATP6P1 CLU chr8 27462648 - MTATP6P1 chr1 569023 + Exonic hg19 LGG TCGA-S9-A7J1 3 8 Out-of-frame Inter-chr p21.1 Tumor suppressor gene p36.33 32225 ChimerSeq STARFusion TCGA_RNA-Seq MINPP1-CFL1P1 MINPP1 chr10 89272978 + CFL1P1 chr10 89603567 + Exonic hg19 LGG TCGA-FG-A70Z 17 15 CDS-5'UTR Intra-chr q23.2 Seq+ 32226 ChimerSeq STARFusion TCGA_RNA-Seq ATAD1-ANKRD22 ATAD1 chr10 89550067 - ANKRD22 chr10 90583135 - Exonic hg19 LGG TCGA-FG-A70Z 7 18 Out-of-frame Intra-chr q23.31 Seq+ 32227 ChimerSeq STARFusion TCGA_RNA-Seq PTEN-ATAD1 PTEN chr10 89653866 + ATAD1 chr10 89550187 - Exonic hg19 LGG TCGA-FG-A70Z 7 17 Out-of-frame Intra-chr q23.31 Oncogene Tumor suppressor gene Seq+ 32228 ChimerSeq STARFusion TCGA_RNA-Seq ATAD1-PAPSS2 ATAD1 chr10 89574195 - PAPSS2 chr10 89468953 + Exonic hg19 LGG TCGA-FG-A70Z 6 17 In-Frame Intra-chr q23.2 Seq+ 32229 ChimerSeq STARFusion TCGA_RNA-Seq NDEL1-CHD3 NDEL1 chr17 8352004 + CHD3 chr17 7814165 + Exonic hg19 LGG TCGA-FG-A60L 3 29 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 32230 ChimerSeq STARFusion TCGA_RNA-Seq NDEL1-CHD3 NDEL1 chr17 8352004 + CHD3 chr17 7813746 + Exonic hg19 LGG TCGA-FG-A60L 3 29 In-Frame Intra-chr p13.1 p13.1 Seq+ 32231 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 LGG TCGA-DU-6392 3 13 CDS-5'UTR Intra-chr q23 Seq+ 32232 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140770834 + ACPL2 chr3 140978965 + Exonic hg19 LGG TCGA-DU-6392 2 13 5'UTR-5'UTR Intra-chr q23 Seq+ 32233 ChimerSeq STARFusion TCGA_RNA-Seq NPHP4-ACOT7 NPHP4 chr1 6052304 - ACOT7 chr1 6355040 - Exonic hg19 LGG TCGA-DU-6395 2 19 5'UTR-CDS Intra-chr p36.31 p36.31 Seq+ 32234 ChimerSeq STARFusion TCGA_RNA-Seq B3GALT5-IGSF5 B3GALT5 chr21 40977152 + IGSF5 chr21 41137462 + Exonic hg19 LGG TCGA-DU-6395 2 7 5'UTR-CDS Intra-chr q22.2 q22.2 32235 ChimerSeq STARFusion TCGA_RNA-Seq CCDC91-FAR2 CCDC91 chr12 28412375 + FAR2 chr12 29423345 + Exonic hg19 LGG TCGA-HT-7873 18 65 CDS-5'UTR Intra-chr p11.22 p11.22 Seq+ 32236 ChimerSeq STARFusion TCGA_RNA-Seq PAPSS2-ATAD1 PAPSS2 chr10 89475600 + ATAD1 chr10 89574369 - Exonic hg19 LGG TCGA-HT-7873 11 29 CDS-5'UTR Intra-chr q23.2 Seq+ 32237 ChimerSeq STARFusion TCGA_RNA-Seq GPSM1-NUP214 GPSM1 chr9 139252661 + NUP214 chr9 134002911 + Exonic hg19 LGG TCGA-HT-7873 3 21 Out-of-frame Intra-chr q34.3 q34.13 Oncogene Seq+ 32238 ChimerSeq STARFusion TCGA_RNA-Seq GPSM1-NUP214 GPSM1 chr9 139251002 + NUP214 chr9 134002911 + Exonic hg19 LGG TCGA-HT-7873 2 21 In-Frame Intra-chr q34.3 q34.13 Oncogene Seq+ 32239 ChimerSeq STARFusion TCGA_RNA-Seq CDK5RAP2-GRIN1 CDK5RAP2 chr9 123280705 - GRIN1 chr9 140036465 + Exonic hg19 LGG TCGA-HT-7873 3 8 In-Frame Intra-chr q33.2 q34.3 Seq+ 32240 ChimerSeq STARFusion TCGA_RNA-Seq MTERFD1-CCDC178 MTERFD1 chr8 97263134 - CCDC178 chr18 30554645 - Exonic hg19 LGG TCGA-DU-6397 2 7 Out-of-frame Inter-chr q12.1 32241 ChimerSeq STARFusion TCGA_RNA-Seq CORO1C-ZNF664 CORO1C chr12 109125205 - ZNF664 chr12 124495928 + Exonic hg19 LGG TCGA-HW-A5KL 8 49 5'UTR-5'UTR Intra-chr q24.11 q24.31 Transcription factor Seq+ 32242 ChimerSeq STARFusion TCGA_RNA-Seq CORO1C-FAM101A CORO1C chr12 109125205 - FAM101A chr12 124634141 + Exonic hg19 LGG TCGA-HW-A5KL 2 14 5'UTR-5'UTR Intra-chr q24.11 32243 ChimerSeq STARFusion TCGA_RNA-Seq CHD8-KIAA1211 CHD8 chr14 21924191 - KIAA1211 chr4 57045450 + Exonic hg19 LGG TCGA-DU-7302 6 15 5'UTR-5'UTR Inter-chr q11.2 q12 Seq+ 32244 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 LGG TCGA-DU-7302 2 9 CDS-5'UTR Intra-chr q23 Seq+ 32245 ChimerSeq STARFusion TCGA_RNA-Seq PSMD3-UNC45B PSMD3 chr17 38142965 + UNC45B chr17 33498341 + Exonic hg19 LGG TCGA-P5-A5EV 14 18 In-Frame Intra-chr q21.1 q12 Seq+ 32246 ChimerSeq STARFusion TCGA_RNA-Seq ZNF846-NFIX ZNF846 chr19 9896614 - NFIX chr19 13183861 + Exonic hg19 LGG TCGA-P5-A5EU 22 137 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.13 Transcription factor Seq+ 32247 ChimerSeq STARFusion TCGA_RNA-Seq ZNF846-NFIX ZNF846 chr19 9896602 - NFIX chr19 13183861 + Exonic hg19 LGG TCGA-P5-A5EU 11 132 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.13 Transcription factor Seq+ 32248 ChimerSeq STARFusion TCGA_RNA-Seq LRP3-VAV1 LRP3 chr19 33687683 + VAV1 chr19 6820713 + Exonic hg19 LGG TCGA-P5-A5EU 4 10 Out-of-frame Intra-chr q13.11 p13.3 Seq+ 32249 ChimerSeq STARFusion TCGA_RNA-Seq TSHZ3-CEACAM7 TSHZ3 chr19 31840086 - CEACAM7 chr19 42181431 - Exonic hg19 LGG TCGA-P5-A5EU 4 6 In-Frame Intra-chr q12 Transcription factor Seq+ 32250 ChimerSeq STARFusion TCGA_RNA-Seq AKT2-UPF1 AKT2 chr19 40791088 - UPF1 chr19 18956789 + Exonic hg19 LGG TCGA-P5-A5EU 2 7 5'UTR-CDS Intra-chr q13.2 AGC:Akt Oncogene p13.11 Seq+ 32251 ChimerSeq STARFusion TCGA_RNA-Seq LRP4-PRDM11 LRP4 chr11 46894651 - PRDM11 chr11 45226262 + Exonic hg19 LGG TCGA-HT-8563 2 9 Out-of-frame Intra-chr p11.2 p11.2 Tumor suppressor gene Seq+ 32252 ChimerSeq STARFusion TCGA_RNA-Seq XAB2-IGL@ XAB2 chr19 7692208 - IGL@ chr22 23247170 + Exonic hg19 LGG TCGA-P5-A5EX 9 1 Out-of-frame Inter-chr p13.2 q11.22 32253 ChimerSeq STARFusion TCGA_RNA-Seq XAB2-IGLC3 XAB2 chr19 7692208 - IGLC3 chr22 23247170 + Exonic hg19 LGG TCGA-P5-A5EX 9 1 Out-of-frame Inter-chr p13.2 q11.22 32254 ChimerSeq STARFusion TCGA_RNA-Seq KRT8P1-GFAP KRT8P1 chr14 39197438 + GFAP chr17 42988025 - Exonic hg19 LGG TCGA-P5-A5EX 7 2 Out-of-frame Inter-chr q21.1 q21.31 32255 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-GFAP IGKC chr2 89157036 - GFAP chr17 42992868 - Exonic hg19 LGG TCGA-P5-A5EX 3 14 Out-of-frame Inter-chr p11.2 q21.31 32256 ChimerSeq STARFusion TCGA_RNA-Seq SBF2-IGL@ SBF2 chr11 10051374 - IGL@ chr22 23247173 + Exonic hg19 LGG TCGA-P5-A5EX 5 1 Out-of-frame Inter-chr p15.4 q11.22 32257 ChimerSeq STARFusion TCGA_RNA-Seq SBF2-IGLC3 SBF2 chr11 10051374 - IGLC3 chr22 23247173 + Exonic hg19 LGG TCGA-P5-A5EX 5 1 Out-of-frame Inter-chr p15.4 q11.22 32258 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 LGG TCGA-HT-8564 2 14 CDS-5'UTR Intra-chr q23 Seq+ 32259 ChimerSeq STARFusion TCGA_RNA-Seq DOCK10-IL1RN DOCK10 chr2 225796266 - IL1RN chr2 113885266 + Exonic hg19 LGG TCGA-TQ-A7RH 5 16 Out-of-frame Intra-chr q36.2 q14.1 Seq+ 32260 ChimerSeq STARFusion TCGA_RNA-Seq RAB3IP-GYS2 RAB3IP chr12 70132811 + GYS2 chr12 21733457 - Exonic hg19 LGG TCGA-TQ-A7RH 4 15 5'UTR-CDS Intra-chr q15 p12.1 Seq+ 32261 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-C17orf105 TAOK1 chr17 27838010 + C17orf105 chr17 41861205 + Exonic hg19 LGG TCGA-TQ-A7RJ 5 49 In-Frame Intra-chr q11.2 q21.31 Seq+ 32262 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-C17orf105 TAOK1 chr17 27838010 + C17orf105 chr17 41861751 + Exonic hg19 LGG TCGA-TQ-A7RJ 3 47 CDS-3'UTR Intra-chr q11.2 q21.31 Seq+ 32263 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-C17orf105 TAOK1 chr17 27838010 + C17orf105 chr17 41860548 + Exonic hg19 LGG TCGA-TQ-A7RJ 2 47 Out-of-frame Intra-chr q11.2 q21.31 Seq+ 32264 ChimerSeq STARFusion TCGA_RNA-Seq APOE-GFAP APOE chr19 45412271 + GFAP chr17 42983658 - Exonic hg19 LGG TCGA-TQ-A7RJ 3 22 Out-of-frame Inter-chr q13.32 q21.31 32265 ChimerSeq STARFusion TCGA_RNA-Seq IFT80-RARRES1 IFT80 chr3 160093600 - RARRES1 chr3 158422716 - Exonic hg19 LGG TCGA-TQ-A7RK 9 30 In-Frame Intra-chr q25.33 q25.32 Seq+ 32266 ChimerSeq STARFusion TCGA_RNA-Seq DTNA-CD82 DTNA chr18 32346005 + CD82 chr11 44609025 + Exonic hg19 LGG TCGA-TQ-A7RK 5 16 CDS-5'UTR Inter-chr q12.1 p11.2 Tumor suppressor gene Seq+ 32267 ChimerSeq STARFusion TCGA_RNA-Seq SLC35B3-GSTA5 SLC35B3 chr6 8428170 - GSTA5 chr6 52699080 - Exonic hg19 LGG TCGA-TQ-A7RK 4 6 In-Frame Intra-chr p24.3 p12.2 Seq+ 32268 ChimerSeq STARFusion TCGA_RNA-Seq RGMB-CCDC112 RGMB chr5 98109910 + CCDC112 chr5 114620605 - Exonic hg19 LGG TCGA-TQ-A7RM 32 230 Out-of-frame Intra-chr q15 q22.3 Seq+ 32269 ChimerSeq STARFusion TCGA_RNA-Seq PCGF3-NPTXR PCGF3 chr4 724899 + NPTXR chr22 39224517 - Exonic hg19 LGG TCGA-TQ-A7RM 16 100 5'UTR-CDS Inter-chr p16.3 q13.1 Seq+ 32270 ChimerSeq STARFusion TCGA_RNA-Seq PCGF3-NPTXR PCGF3 chr4 724899 + NPTXR chr22 39224514 - Exonic hg19 LGG TCGA-TQ-A7RM 6 98 5'UTR-CDS Inter-chr p16.3 q13.1 Seq+ 32271 ChimerSeq STARFusion TCGA_RNA-Seq DLEU2-ARL2BPP7 DLEU2 chr13 50642233 - ARL2BPP7 chr9 104817965 - Exonic hg19 LGG TCGA-TQ-A7RM 11 17 Out-of-frame Inter-chr q14.2 Tumor suppressor gene q31.1 Seq+ 32272 ChimerSeq STARFusion TCGA_RNA-Seq STK39-TMEM245 STK39 chr2 168931492 - TMEM245 chr9 111870850 - Exonic hg19 LGG TCGA-TQ-A7RM 2 8 In-Frame Inter-chr q24.3 q31.3 Seq+ 32273 ChimerSeq STARFusion TCGA_RNA-Seq MLYCD-NKAIN4 MLYCD chr16 83933151 + NKAIN4 chr20 61880247 - Exonic hg19 LGG TCGA-TQ-A7RO 7 0 In-Frame Inter-chr q23.3 q13.33 32274 ChimerSeq STARFusion TCGA_RNA-Seq ATRX-IGH@ ATRX chrX 76972608 - IGH@ chr14 107283096 - Exonic hg19 LGG TCGA-TQ-A7RF 9 50 Out-of-frame Inter-chr q21.1 Oncogene 32.33 32275 ChimerSeq STARFusion TCGA_RNA-Seq LAMA4-TSPAN18 LAMA4 chr6 112496515 - TSPAN18 chr11 44927958 + Exonic hg19 LGG TCGA-TQ-A7RF 4 8 CDS-5'UTR Inter-chr q21 p11.2 Seq+ 32276 ChimerSeq STARFusion TCGA_RNA-Seq DOCK3-FAM212A DOCK3 chr3 50816189 + FAM212A chr3 49841614 + Exonic hg19 LGG TCGA-TQ-A7RF 3 7 Out-of-frame Intra-chr p21.2 p21.31 Seq+ 32277 ChimerSeq STARFusion TCGA_RNA-Seq LINC00461-MEF2C LINC00461 chr5 87966854 - MEF2C chr5 88119744 - Exonic hg19 LGG TCGA-TQ-A7RF 2 4 3'UTR-5'UTR Intra-chr q14.3 q14.3 Transcription factor 32278 ChimerSeq STARFusion TCGA_RNA-Seq GRIA4-NAALAD2 GRIA4 chr11 105732934 + NAALAD2 chr11 89906992 + Exonic hg19 LGG TCGA-DB-5277 24 113 In-Frame Intra-chr q22.3 q14.3 Seq+ 32279 ChimerSeq STARFusion TCGA_RNA-Seq IGDCC3-GLDN IGDCC3 chr15 65667435 - GLDN chr15 51675982 + Exonic hg19 LGG TCGA-DB-5277 34 69 In-Frame Intra-chr q22.31 q21.2 Seq+ 32280 ChimerSeq STARFusion TCGA_RNA-Seq SLCO3A1-HDDC3 SLCO3A1 chr15 92397318 + HDDC3 chr15 91475340 - Exonic hg19 LGG TCGA-DB-5277 4 11 Out-of-frame Intra-chr q26.1 q26.1 Seq+ 32281 ChimerSeq STARFusion TCGA_RNA-Seq SPRED2-NAPG SPRED2 chr2 65659096 - NAPG chr18 10530767 + Exonic hg19 LGG TCGA-DB-5277 3 14 In-Frame Inter-chr p14 p11.22 Seq+ 32282 ChimerSeq STARFusion TCGA_RNA-Seq BICD1-ZNF438 BICD1 chr12 32491913 + ZNF438 chr10 31138372 - Exonic hg19 LGG TCGA-DB-5277 4 6 CDS-3'UTR Inter-chr p11.21 p11.23 Transcription factor Seq+ 32283 ChimerSeq STARFusion TCGA_RNA-Seq PCNT-DIP2A PCNT chr21 47787054 + DIP2A chr21 47980635 + Exonic hg19 LGG TCGA-DB-5277 3 9 In-Frame Intra-chr q22.3 q22.3 Seq+ 32284 ChimerSeq STARFusion TCGA_RNA-Seq PRKCH-MNAT1 PRKCH chr14 61789182 + MNAT1 chr14 61434947 + Exonic hg19 LGG TCGA-TQ-A7RS 4 13 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 32285 ChimerSeq STARFusion TCGA_RNA-Seq VPS37B-PTPN11 VPS37B chr12 123380499 - PTPN11 chr12 112939948 + Exonic hg19 LGG TCGA-WY-A85E 2 7 In-Frame Intra-chr q24.31 q24.13 Oncogene Tumor suppressor gene Seq+ 32286 ChimerSeq STARFusion TCGA_RNA-Seq ATAD1-LIPF ATAD1 chr10 89550067 - LIPF chr10 90427044 + Exonic hg19 LGG TCGA-E1-A7YN 20 41 In-Frame Intra-chr q23.31 Seq+ 32287 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHG1-MTHFD1L PLEKHG1 chr6 151055228 + MTHFD1L chr6 151198770 + Exonic hg19 LGG TCGA-E1-A7YN 7 8 In-Frame Intra-chr q25.1 q25.1 Seq+ 32288 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 LGG TCGA-E1-A7YN 6 0 Out-of-frame Inter-chr q13.33 p21.1 32289 ChimerSeq STARFusion TCGA_RNA-Seq LIPN-MINPP1 LIPN chr10 90530748 + MINPP1 chr10 89311839 + Exonic hg19 LGG TCGA-E1-A7YN 2 8 Out-of-frame Intra-chr q23.31 q23.2 Seq+ 32290 ChimerSeq STARFusion TCGA_RNA-Seq ABI1-PTP4A3 ABI1 chr10 27112067 - PTP4A3 chr8 142431488 + Exonic hg19 LGG TCGA-TQ-A7RV 6 13 CDS-5'UTR Inter-chr p12.1 q24.3 Seq+ 32291 ChimerSeq STARFusion TCGA_RNA-Seq ITGB1-RIMS2 ITGB1 chr10 33197296 - RIMS2 chr8 104955001 + Exonic hg19 LGG TCGA-TQ-A7RV 5 9 In-Frame Inter-chr p11.22 Tumor suppressor gene q22.3 32292 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1429-SYBU KIAA1429 chr8 95547067 - SYBU chr8 110631268 - Exonic hg19 LGG TCGA-TQ-A7RV 2 10 In-Frame Intra-chr q22.1 q23.2 Seq+ 32293 ChimerSeq STARFusion TCGA_RNA-Seq RALBP1-CYP4F35P RALBP1 chr18 9517301 + CYP4F35P chr18 14338697 + Exonic hg19 LGG TCGA-TQ-A7RV 3 4 CDS-5'UTR Intra-chr p11.22 p11.21 32294 ChimerSeq STARFusion TCGA_RNA-Seq BAP1-DNAH1 BAP1 chr3 52439781 - DNAH1 chr3 52378506 + Exonic hg19 LGG TCGA-TQ-A7RW 18 45 Out-of-frame Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 Seq+ 32295 ChimerSeq STARFusion TCGA_RNA-Seq CCBL2-DAP3 CCBL2 chr1 89458268 - DAP3 chr1 155707948 + Exonic hg19 LGG TCGA-TQ-A7RW 4 3 5'UTR-CDS Intra-chr q22 32296 ChimerSeq STARFusion TCGA_RNA-Seq RBMXL1-DAP3 RBMXL1 chr1 89458268 - DAP3 chr1 155707948 + Exonic hg19 LGG TCGA-TQ-A7RW 4 3 5'UTR-CDS Intra-chr p22.2 q22 Seq+ 32297 ChimerSeq STARFusion TCGA_RNA-Seq RGMA-ADAMTSL3 RGMA chr15 93632148 - ADAMTSL3 chr15 84581844 + Exonic hg19 LGG TCGA-TQ-A7RW 2 9 In-Frame Intra-chr q26.1 q25.2 Seq+ 32298 ChimerSeq STARFusion TCGA_RNA-Seq PSEN1-NUMB PSEN1 chr14 73640415 + NUMB chr14 73822474 - Exonic hg19 LGG TCGA-TQ-A7RW 2 7 CDS-5'UTR Intra-chr q24.2 q24.3 Tumor suppressor gene 32299 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-PCBD1 CCDC6 chr10 61665880 - PCBD1 chr10 72645686 - Exonic hg19 LGG TCGA-E1-A7YH 2 7 In-Frame Intra-chr q21.2 q22.1 Seq+ 32300 ChimerSeq STARFusion TCGA_RNA-Seq KRT8P1-GFAP KRT8P1 chr14 39197439 + GFAP chr17 42988024 - Exonic hg19 LGG TCGA-E1-A7YK 6 2 Out-of-frame Inter-chr q21.1 q21.31 32301 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D15-BMPER TBC1D15 chr12 72266783 + BMPER chr7 33976901 + Exonic hg19 LGG TCGA-DU-A5TY 29 251 In-Frame Inter-chr q21.1 p14.3 Seq+ 32302 ChimerSeq STARFusion TCGA_RNA-Seq MSRB3-JAZF1 MSRB3 chr12 65722383 + JAZF1 chr7 27880486 - Exonic hg19 LGG TCGA-DU-A5TY 32 86 Out-of-frame Inter-chr q14.3 p15.1 Transcription factor Seq+ 32303 ChimerSeq STARFusion TCGA_RNA-Seq SEC61G-IKZF1 SEC61G chr7 54825188 - IKZF1 chr7 50435704 + Exonic hg19 LGG TCGA-DU-A5TY 10 35 Out-of-frame Intra-chr p11.2 p12.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 32304 ChimerSeq STARFusion TCGA_RNA-Seq HOXA3-KIAA0895 HOXA3 chr7 27150345 - KIAA0895 chr7 36429636 - Exonic hg19 LGG TCGA-DU-A5TY 9 32 Out-of-frame Intra-chr p15.2 Transcription factor p14.2 Seq+ 32305 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-RAB3IP FRS2 chr12 69864310 + RAB3IP chr12 70193989 + Exonic hg19 LGG TCGA-DU-A5TY 4 38 5'UTR-CDS Intra-chr q15 q15 Seq+ 32306 ChimerSeq STARFusion TCGA_RNA-Seq ADCYAP1R1-DFNA5 ADCYAP1R1 chr7 31132349 + DFNA5 chr7 24750007 - Exonic hg19 LGG TCGA-DU-A5TY 6 28 Out-of-frame Intra-chr p14.3 p15.3 Tumor suppressor gene Seq+ 32307 ChimerSeq STARFusion TCGA_RNA-Seq JAZF1-SNX13 JAZF1 chr7 28220082 - SNX13 chr7 17931258 - Exonic hg19 LGG TCGA-DU-A5TY 7 19 Out-of-frame Intra-chr p15.1 Transcription factor p21.1 Seq+ 32308 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-GRIP1 FRS2 chr12 69864310 + GRIP1 chr12 66800208 - Exonic hg19 LGG TCGA-DU-A5TY 4 26 5'UTR-CDS Intra-chr q15 q14.3 Seq+ 32309 ChimerSeq STARFusion TCGA_RNA-Seq AUTS2-LINC01005 AUTS2 chr7 69064948 + LINC01005 chr7 63488290 - Exonic hg19 LGG TCGA-DU-A5TY 4 19 Out-of-frame Intra-chr q11.22 q11.21 32310 ChimerSeq STARFusion TCGA_RNA-Seq TAX1BP1-MSRB3 TAX1BP1 chr7 27779888 + MSRB3 chr12 65720606 + Exonic hg19 LGG TCGA-DU-A5TY 2 18 5'UTR-CDS Inter-chr p15.2 q14.3 32311 ChimerSeq STARFusion TCGA_RNA-Seq AUTS2-TBC1D30 AUTS2 chr7 69599557 + TBC1D30 chr12 65221615 + Exonic hg19 LGG TCGA-DU-A5TY 3 11 Out-of-frame Inter-chr q11.22 q14.3 Seq+ 32312 ChimerSeq STARFusion TCGA_RNA-Seq LRRK2-GXYLT1 LRRK2 chr12 40619442 + GXYLT1 chr12 42512973 - Exonic hg19 LGG TCGA-DU-A5TY 2 11 Out-of-frame Intra-chr q12 TKL:LRRK q12 Seq+ 32313 ChimerSeq STARFusion TCGA_RNA-Seq INTS4L2-VOPP1 INTS4L2 chr7 65141946 + VOPP1 chr7 55560111 - Exonic hg19 LGG TCGA-DU-A5TY 2 10 5'UTR-CDS Intra-chr p11.2 32314 ChimerSeq STARFusion TCGA_RNA-Seq PTPRR-VWC2 PTPRR chr12 71050484 - VWC2 chr7 49951630 + Exonic hg19 LGG TCGA-DU-A5TY 3 4 Out-of-frame Inter-chr q15 p12.2 Seq+ 32315 ChimerSeq STARFusion TCGA_RNA-Seq RASSF3-SNX10 RASSF3 chr12 65004523 + SNX10 chr7 26386040 + Exonic hg19 LGG TCGA-DU-A5TY 3 4 5'UTR-5'UTR Inter-chr q14.2 Tumor suppressor gene p15.2 Seq+ 32316 ChimerSeq STARFusion TCGA_RNA-Seq DPY19L1-NFE2L3 DPY19L1 chr7 35050080 - NFE2L3 chr7 26217563 + Exonic hg19 LGG TCGA-DU-A5TY 2 7 Out-of-frame Intra-chr p14.2 p15.2 Transcription factor 32317 ChimerSeq STARFusion TCGA_RNA-Seq AVL9-TSPAN31 AVL9 chr7 32535414 + TSPAN31 chr12 58139528 + Exonic hg19 LGG TCGA-DU-A5TY 2 6 In-Frame Inter-chr p14.3 q14.1 Seq+ 32318 ChimerSeq STARFusion TCGA_RNA-Seq HMGA2-TAX1BP1 HMGA2 chr12 66232349 + TAX1BP1 chr7 27824782 + Exonic hg19 LGG TCGA-DU-A5TY 2 5 In-Frame Inter-chr q14.3 Transcription factor p15.2 32319 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-COL15A1 CTDSP2 chr12 58240155 - COL15A1 chr9 101759216 + Exonic hg19 LGG TCGA-IK-7675 27 44 Out-of-frame Inter-chr q14.1 q22.33 Seq+ 32320 ChimerSeq STARFusion TCGA_RNA-Seq DIP2B-RTTN DIP2B chr12 51102345 + RTTN chr18 67795782 - Exonic hg19 LGG TCGA-IK-7675 4 20 Out-of-frame Inter-chr q13.12 q22.2 Seq+ 32321 ChimerSeq STARFusion TCGA_RNA-Seq PKNOX2-FEZ1 PKNOX2 chr11 125281761 + FEZ1 chr11 125326002 - Exonic hg19 LGG TCGA-IK-7675 2 19 Out-of-frame Intra-chr q24.2 Transcription factor q24.2 Tumor suppressor gene 32322 ChimerSeq STARFusion TCGA_RNA-Seq B3GALT5-IGSF5 B3GALT5 chr21 40977152 + IGSF5 chr21 41137462 + Exonic hg19 LGG TCGA-IK-7675 2 17 5'UTR-CDS Intra-chr q22.2 q22.2 32323 ChimerSeq STARFusion TCGA_RNA-Seq UNC79-BRF1 UNC79 chr14 94069764 + BRF1 chr14 105752713 - Exonic hg19 LGG TCGA-DU-A5TU 2 9 In-Frame Intra-chr q32.33 Tumor suppressor gene Seq+ 32324 ChimerSeq STARFusion TCGA_RNA-Seq C3orf70-CLDN11 C3orf70 chr3 184870416 - CLDN11 chr3 170577772 + Exonic hg19 LGG TCGA-DU-A5TW 2 4 CDS-3'UTR Intra-chr q27.2 q26.2 Seq+ 32325 ChimerSeq STARFusion TCGA_RNA-Seq KNTC1-CCDC53 KNTC1 chr12 123036243 + CCDC53 chr12 102433756 - Exonic hg19 LGG TCGA-DU-A5TP 3 7 In-Frame Intra-chr q24.31 Seq+ 32326 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-PIP5K1P1 KCTD20 chr6 36457999 + PIP5K1P1 chr6 7987766 + Exonic hg19 LGG TCGA-DU-A5TS 7 0 Out-of-frame Intra-chr p21.31 p24.3 32327 ChimerSeq STARFusion TCGA_RNA-Seq HCN2-BSG HCN2 chr19 590577 + BSG chr19 579500 + Exonic hg19 LGG TCGA-FG-8187 9 38 3'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 32328 ChimerSeq STARFusion TCGA_RNA-Seq RIMKLB-PIP4K2A RIMKLB chr12 8850893 + PIP4K2A chr10 22898646 - Exonic hg19 LGG TCGA-FG-8185 10 25 5'UTR-CDS Inter-chr p13.31 p12.2 Seq+ 32329 ChimerSeq STARFusion TCGA_RNA-Seq PLCB1-DTD1 PLCB1 chr20 8770908 + DTD1 chr20 18608771 + Exonic hg19 LGG TCGA-FG-8185 3 12 Out-of-frame Intra-chr p12.3 p11.23 Seq+ 32330 ChimerSeq STARFusion TCGA_RNA-Seq CNN2-C2CD4C CNN2 chr19 1031191 + C2CD4C chr19 408401 - Exonic hg19 LGG TCGA-DB-A4XH 3 21 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 32331 ChimerSeq STARFusion TCGA_RNA-Seq CNST-RGS7 CNST chr1 246811339 + RGS7 chr1 240990472 - Exonic hg19 LGG TCGA-HT-8108 3 23 In-Frame Intra-chr q44 q43 Seq+ 32332 ChimerSeq STARFusion TCGA_RNA-Seq ATRX-BCL2 ATRX chrX 77041468 - BCL2 chr18 60795992 - Exonic hg19 LGG TCGA-DB-A4XF 13 73 Out-of-frame Inter-chr q21.1 Oncogene q21.33 Oncogene Seq+ 32333 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-RNFT1 BCAS3 chr17 59161925 + RNFT1 chr17 58040645 - Exonic hg19 LGG TCGA-DB-A4XF 3 10 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 32334 ChimerSeq STARFusion TCGA_RNA-Seq SBNO1-RILPL2 SBNO1 chr12 123849248 - RILPL2 chr12 123907704 - Exonic hg19 LGG TCGA-DB-A4XF 3 6 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 32335 ChimerSeq STARFusion TCGA_RNA-Seq AGAP1-IGSF21 AGAP1 chr2 236659132 + IGSF21 chr1 18554392 + Exonic hg19 LGG TCGA-DU-8161 13 51 In-Frame Inter-chr q37.2 p36.13 Seq+ 32336 ChimerSeq STARFusion TCGA_RNA-Seq ATP1A2-CLU ATP1A2 chr1 160091041 + CLU chr8 27464041 - Exonic hg19 LGG TCGA-DU-8161 2 14 In-Frame Inter-chr q23.2 p21.1 Tumor suppressor gene Seq+ 32337 ChimerSeq STARFusion TCGA_RNA-Seq PER3-CELA2A PER3 chr1 7845646 + CELA2A chr1 15792494 + Exonic hg19 LGG TCGA-DU-8161 4 6 In-Frame Intra-chr p36.23 p36.21 Seq+ 32338 ChimerSeq STARFusion TCGA_RNA-Seq PER3-CELA2B PER3 chr1 7845646 + CELA2B chr1 15792494 + Exonic hg19 LGG TCGA-DU-8161 4 6 CDS-5'UTR Intra-chr p36.23 p36.21 Seq+ 32339 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-PDE4A DNM2 chr19 10829079 + PDE4A chr19 10556894 + Exonic hg19 LGG TCGA-DB-A4XB 3 14 In-Frame Intra-chr p13.2 p13.2 Seq+ 32340 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA6-LRRN2 PLEKHA6 chr1 204328822 - LRRN2 chr1 204589346 - Exonic hg19 LGG TCGA-FG-A4MW 55 82 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 32341 ChimerSeq STARFusion TCGA_RNA-Seq ATF1-CHIT1 ATF1 chr12 51158090 + CHIT1 chr1 203182173 - Exonic hg19 LGG TCGA-FG-A4MW 6 16 5'UTR-3'UTR Inter-chr q13.12 Oncogene Transcription factor q32.1 Seq+ 32342 ChimerSeq STARFusion TCGA_RNA-Seq BTBD2-OAS2 BTBD2 chr19 1993019 - OAS2 chr12 113424843 + Exonic hg19 LGG TCGA-FG-A4MU 29 140 In-Frame Inter-chr p13.3 q24.13 Seq+ 32343 ChimerSeq STARFusion TCGA_RNA-Seq SEC61G-GLUL SEC61G chr7 54826851 - GLUL chr1 182357885 - Exonic hg19 LGG TCGA-FG-A4MU 3 11 5'UTR-5'UTR Inter-chr p11.2 q25.3 Seq+ 32344 ChimerSeq STARFusion TCGA_RNA-Seq SHC2-R3HDM4 SHC2 chr19 430684 - R3HDM4 chr19 902130 - Exonic hg19 LGG TCGA-FG-A4MY 3 17 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 32345 ChimerSeq STARFusion TCGA_RNA-Seq NRXN2-APOE NRXN2 chr11 64391039 - APOE chr19 45411017 + Exonic hg19 LGG TCGA-FG-A4MY 4 1 Out-of-frame Inter-chr q13.1 q13.32 32346 ChimerSeq STARFusion TCGA_RNA-Seq MFSD2A-LAPTM5 MFSD2A chr1 40421057 + LAPTM5 chr1 31215396 - Exonic hg19 LGG TCGA-CS-6188 27 242 In-Frame Intra-chr p34.2 Tumor suppressor gene p35.2 Seq+ 32347 ChimerSeq STARFusion TCGA_RNA-Seq MFSD2A-LAPTM5 MFSD2A chr1 40421057 + LAPTM5 chr1 31230642 - Exonic hg19 LGG TCGA-CS-6188 6 241 CDS-5'UTR Intra-chr p34.2 Tumor suppressor gene p35.2 Seq+ 32348 ChimerSeq STARFusion TCGA_RNA-Seq SNIP1-KIF17 SNIP1 chr1 38018246 - KIF17 chr1 20992824 - Exonic hg19 LGG TCGA-CS-6188 3 59 In-Frame Intra-chr p34.3 p36.12 Seq+ 32349 ChimerSeq STARFusion TCGA_RNA-Seq GFAP-AQP1 GFAP chr17 42983838 - AQP1 chr7 30964038 + Exonic hg19 LGG TCGA-CS-6188 3 8 Out-of-frame Inter-chr q21.31 p14.3 32350 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-ELAVL3 FGFR3 chr4 1808661 + ELAVL3 chr19 11577642 - Exonic hg19 LGG TCGA-CS-6186 53 379 In-Frame Inter-chr p16.3 TK:FGFR Oncogene p13.2 Seq+ 32351 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-ELAVL3 FGFR3 chr4 1808661 + ELAVL3 chr19 11577639 - Exonic hg19 LGG TCGA-CS-6186 27 379 In-Frame Inter-chr p16.3 TK:FGFR Oncogene p13.2 Seq+ 32352 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-ELAVL3 FGFR3 chr4 1809011 + ELAVL3 chr19 11577642 - Exonic hg19 LGG TCGA-CS-6186 24 379 3'UTR-CDS Inter-chr p16.3 TK:FGFR Oncogene p13.2 Seq+ 32353 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-ELAVL3 FGFR3 chr4 1809107 + ELAVL3 chr19 11577642 - Exonic hg19 LGG TCGA-CS-6186 9 379 3'UTR-CDS Inter-chr p16.3 TK:FGFR Oncogene p13.2 Seq+ 32354 ChimerSeq STARFusion TCGA_RNA-Seq BICD1-SOX5 BICD1 chr12 32260478 + SOX5 chr12 23818498 - Exonic hg19 LGG TCGA-DU-7007 20 168 In-Frame Intra-chr p11.21 p12.1 Transcription factor Seq+ 32355 ChimerSeq STARFusion TCGA_RNA-Seq BICD1-SOX5 BICD1 chr12 32260478 + SOX5 chr12 23818501 - Exonic hg19 LGG TCGA-DU-7007 8 167 CDS-5'UTR Intra-chr p11.21 p12.1 Transcription factor Seq+ 32356 ChimerSeq STARFusion TCGA_RNA-Seq BICD1-SOX5 BICD1 chr12 32260478 + SOX5 chr12 23793831 - Exonic hg19 LGG TCGA-DU-7007 2 167 Out-of-frame Intra-chr p11.21 p12.1 Transcription factor Seq+ 32357 ChimerSeq STARFusion TCGA_RNA-Seq TMTC1-CASC1 TMTC1 chr12 29664976 - CASC1 chr12 25264873 - Exonic hg19 LGG TCGA-DU-7007 17 64 In-Frame Intra-chr p11.22 p12.1 Tumor suppressor gene Seq+ 32358 ChimerSeq STARFusion TCGA_RNA-Seq NUMBL-BRD4 NUMBL chr19 41173866 - BRD4 chr19 15349698 - Exonic hg19 LGG TCGA-DU-7007 16 1 Out-of-frame Intra-chr q13.2 p13.12 Atypical:BRD 32359 ChimerSeq STARFusion TCGA_RNA-Seq WNK1-STK38L WNK1 chr12 863490 + STK38L chr12 27455070 + Exonic hg19 LGG TCGA-DU-7007 5 41 Out-of-frame Intra-chr p13.33 p11.23 Seq+ 32360 ChimerSeq STARFusion TCGA_RNA-Seq SOX5-LOH12CR2 SOX5 chr12 23757321 - LOH12CR2 chr12 12509739 - Exonic hg19 LGG TCGA-DU-7007 8 19 CDS-3'UTR Intra-chr p12.1 Transcription factor 32361 ChimerSeq STARFusion TCGA_RNA-Seq FGD4-CCDC91 FGD4 chr12 32655272 + CCDC91 chr12 28515371 + Exonic hg19 LGG TCGA-DU-7007 3 28 5'UTR-CDS Intra-chr p11.21 p11.22 Seq+ 32362 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V0E1-ERGIC1 ATP6V0E1 chr5 172421825 + ERGIC1 chr5 172359439 + Exonic hg19 LGG TCGA-DU-7007 4 10 Out-of-frame Intra-chr q35.1 q35.1 Seq+ 32363 ChimerSeq STARFusion TCGA_RNA-Seq TIMM9-FCF1 TIMM9 chr14 58890726 - FCF1 chr14 75189975 + Exonic hg19 LGG TCGA-DU-7006 28 195 5'UTR-CDS Intra-chr q23.1 q24.3 Seq+ 32364 ChimerSeq STARFusion TCGA_RNA-Seq TIMM9-FCF1 TIMM9 chr14 58893772 - FCF1 chr14 75189975 + Exonic hg19 LGG TCGA-DU-7006 3 182 5'UTR-CDS Intra-chr q23.1 q24.3 Seq+ 32365 ChimerSeq STARFusion TCGA_RNA-Seq BFAR-SPNS1 BFAR chr16 14749067 + SPNS1 chr16 28994178 + Exonic hg19 LGG TCGA-DU-7006 11 69 In-Frame Intra-chr p11.2 Seq+ 32366 ChimerSeq STARFusion TCGA_RNA-Seq BFAR-SPNS1 BFAR chr16 14743830 + SPNS1 chr16 28993677 + Exonic hg19 LGG TCGA-DU-7006 6 69 In-Frame Intra-chr p11.2 Seq+ 32367 ChimerSeq STARFusion TCGA_RNA-Seq BFAR-SPNS1 BFAR chr16 14749067 + SPNS1 chr16 28993677 + Exonic hg19 LGG TCGA-DU-7006 3 69 Out-of-frame Intra-chr p11.2 Seq+ 32368 ChimerSeq STARFusion TCGA_RNA-Seq SUFU-ZCCHC24 SUFU chr10 104309863 + ZCCHC24 chr10 81154196 - Exonic hg19 LGG TCGA-DU-7006 5 19 Out-of-frame Intra-chr q24.32 Oncogene Tumor suppressor gene q22.3 Seq+ 32369 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KA2-MCHR2 RPS6KA2 chr6 167271688 - MCHR2 chr6 100404050 - Exonic hg19 LGG TCGA-DU-7006 5 13 CDS-5'UTR Intra-chr q27 Oncogene Tumor suppressor gene q16.2 Seq+ 32370 ChimerSeq STARFusion TCGA_RNA-Seq GNA13-NR3C1 GNA13 chr17 63049620 - NR3C1 chr5 142662290 - Exonic hg19 LGG TCGA-DU-7006 4 11 Out-of-frame Inter-chr q24.1 q31.3 Transcription factor Seq+ 32371 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KA2-MCHR2 RPS6KA2 chr6 167184351 - MCHR2 chr6 100404050 - Exonic hg19 LGG TCGA-DU-7006 3 13 5'UTR-5'UTR Intra-chr q27 Oncogene Tumor suppressor gene q16.2 Seq+ 32372 ChimerSeq STARFusion TCGA_RNA-Seq RGS6-NPAS3 RGS6 chr14 72976987 + NPAS3 chr14 34145417 + Exonic hg19 LGG TCGA-DU-7006 2 14 Out-of-frame Intra-chr q24.2 q13.1 Transcription factor Seq+ 32373 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-TMEM184B TNRC6B chr22 40574144 + TMEM184B chr22 38644025 - Exonic hg19 LGG TCGA-WY-A859 3 45 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 32374 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-TMEM184B TNRC6B chr22 40552186 + TMEM184B chr22 38644025 - Exonic hg19 LGG TCGA-WY-A859 3 43 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 32375 ChimerSeq STARFusion TCGA_RNA-Seq HECTD4-CRY1 HECTD4 chr12 112819756 - CRY1 chr12 107415970 - Exonic hg19 LGG TCGA-WY-A859 4 21 Out-of-frame Intra-chr q24.13 q23.3 Seq+ 32376 ChimerSeq STARFusion TCGA_RNA-Seq UBXN2A-TPO UBXN2A chr2 24181225 + TPO chr2 1497574 + Exonic hg19 LGG TCGA-WY-A859 3 24 Out-of-frame Intra-chr p23.3 Seq+ 32377 ChimerSeq STARFusion TCGA_RNA-Seq WDR37-PCDH12 WDR37 chr10 1151207 + PCDH12 chr5 141337810 - Exonic hg19 LGG TCGA-WY-A859 4 17 CDS-5'UTR Inter-chr p15.3 q31.3 Seq+ 32378 ChimerSeq STARFusion TCGA_RNA-Seq SMAD5-COL5A1 SMAD5 chr5 135468651 + COL5A1 chr9 137591755 + Exonic hg19 LGG TCGA-WY-A859 7 2 5'UTR-CDS Inter-chr q31.1 Transcription factor q34.3 Seq+ 32379 ChimerSeq STARFusion TCGA_RNA-Seq NUMBL-BRD4 NUMBL chr19 41173867 - BRD4 chr19 15349699 - Exonic hg19 LGG TCGA-E1-5311 7 2 Out-of-frame Intra-chr q13.2 p13.12 Atypical:BRD 32380 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 LGG TCGA-E1-5318 2 9 CDS-5'UTR Intra-chr q23 Seq+ 32381 ChimerSeq STARFusion TCGA_RNA-Seq HIF1A-VRK1 HIF1A chr14 62162557 + VRK1 chr14 97299804 + Exonic hg19 LGG TCGA-R8-A6MK 15 62 CDS-5'UTR Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q32.2 CK1:VRK Seq+ 32382 ChimerSeq STARFusion TCGA_RNA-Seq ZNF676-KANK3 ZNF676 chr19 22375818 - KANK3 chr19 8389980 - Exonic hg19 LGG TCGA-P5-A77X 78 192 In-Frame Intra-chr Transcription factor p13.2 Seq+ 32383 ChimerSeq STARFusion TCGA_RNA-Seq ORAI2-CUX1 ORAI2 chr7 102074108 + CUX1 chr7 101671378 + Exonic hg19 LGG TCGA-DU-8165 2 4 5'UTR-CDS Intra-chr q22.1 q22.1 Tumor suppressor gene Transcription factor Seq+ 32384 ChimerSeq STARFusion TCGA_RNA-Seq KRT8P1-GFAP KRT8P1 chr14 39197438 + GFAP chr17 42988025 - Exonic hg19 LGG TCGA-HT-8114 7 6 Out-of-frame Inter-chr q21.1 q21.31 32385 ChimerSeq STARFusion TCGA_RNA-Seq ATRX-DDX11L1 ATRX chrX 76907604 - DDX11L1 chr1 12010 + Exonic hg19 LGG TCGA-HT-8111 3 70 CDS-3'UTR Inter-chr q21.1 Oncogene p36.33 32386 ChimerSeq STARFusion TCGA_RNA-Seq ANKLE2-NCOR2 ANKLE2 chr12 133327229 - NCOR2 chr12 124812179 - Exonic hg19 LGG TCGA-DU-8167 7 11 In-Frame Intra-chr q24.33 q24.31 Seq+ 32387 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-TMEM132D NCOR2 chr12 124885047 - TMEM132D chr12 130015750 - Exonic hg19 LGG TCGA-DU-8167 5 7 Out-of-frame Intra-chr q24.31 q24.33 Seq+ 32388 ChimerSeq STARFusion TCGA_RNA-Seq NOVA2-LEUTX NOVA2 chr19 46464268 - LEUTX chr19 40275167 + Exonic hg19 LGG TCGA-DU-8166 8 30 CDS-5'UTR Intra-chr q13.32 Transcription factor Seq+ 32389 ChimerSeq STARFusion TCGA_RNA-Seq RERE-VAMP3 RERE chr1 8482787 - VAMP3 chr1 7833502 + Exonic hg19 LGG TCGA-DU-8166 7 25 Out-of-frame Intra-chr p36.23 p36.23 Seq+ 32390 ChimerSeq STARFusion TCGA_RNA-Seq SPON1-SIRT3 SPON1 chr11 14063201 + SIRT3 chr11 233215 - Exonic hg19 LGG TCGA-DU-8166 5 30 In-Frame Intra-chr p15.2 p15.5 Tumor suppressor gene Seq+ 32391 ChimerSeq STARFusion TCGA_RNA-Seq CALM3-CCDC9 CALM3 chr19 47104694 + CCDC9 chr19 47761587 + Exonic hg19 LGG TCGA-DU-8166 7 21 CDS-5'UTR Intra-chr q13.32 q13.32 Seq+ 32392 ChimerSeq STARFusion TCGA_RNA-Seq SPON1-SIRT3 SPON1 chr11 14063201 + SIRT3 chr11 233534 - Exonic hg19 LGG TCGA-DU-8166 4 30 In-Frame Intra-chr p15.2 p15.5 Tumor suppressor gene Seq+ 32393 ChimerSeq STARFusion TCGA_RNA-Seq RERE-VAMP3 RERE chr1 8482787 - VAMP3 chr1 7837220 + Exonic hg19 LGG TCGA-DU-8166 3 25 In-Frame Intra-chr p36.23 p36.23 Seq+ 32394 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 LGG TCGA-DU-8166 3 5 CDS-5'UTR Intra-chr q23 Seq+ 32395 ChimerSeq STARFusion TCGA_RNA-Seq B3GALT5-IGSF5 B3GALT5 chr21 40977152 + IGSF5 chr21 41137462 + Exonic hg19 LGG TCGA-FG-6691 4 5 5'UTR-CDS Intra-chr q22.2 q22.2 32396 ChimerSeq STARFusion TCGA_RNA-Seq HP1BP3-TMCO4 HP1BP3 chr1 21106305 - TMCO4 chr1 20063949 - Exonic hg19 LGG TCGA-FG-6692 5 32 Out-of-frame Intra-chr p36.12 p36.13 Seq+ 32397 ChimerSeq STARFusion TCGA_RNA-Seq HP1BP3-TMCO4 HP1BP3 chr1 21113688 - TMCO4 chr1 20027378 - Exonic hg19 LGG TCGA-FG-6692 2 31 5'UTR-CDS Intra-chr p36.12 p36.13 Seq+ 32398 ChimerSeq STARFusion TCGA_RNA-Seq IGFN1-KANK1 IGFN1 chr1 201191955 + KANK1 chr9 734748 + Exonic hg19 LGG TCGA-DU-8163 10 46 Out-of-frame Inter-chr q32.1 p24.3 Tumor suppressor gene Seq+ 32399 ChimerSeq STARFusion TCGA_RNA-Seq NUP133-HNRNPU NUP133 chr1 229577613 - HNRNPU chr1 245015105 - Exonic hg19 LGG TCGA-HT-7485 3 27 Out-of-frame Intra-chr q42.13 q44 32400 ChimerSeq STARFusion TCGA_RNA-Seq TUBA1A-SCD TUBA1A chr12 49578920 - SCD chr10 102120492 + Exonic hg19 LGG TCGA-HT-7485 4 4 Out-of-frame Inter-chr q13.12 q24.31 32401 ChimerSeq STARFusion TCGA_RNA-Seq B3GALT5-IGSF5 B3GALT5 chr21 40977152 + IGSF5 chr21 41137462 + Exonic hg19 LGG TCGA-HT-7480 2 8 5'UTR-CDS Intra-chr q22.2 q22.2 32402 ChimerSeq STARFusion TCGA_RNA-Seq ERCC6L2-GTF3C4 ERCC6L2 chr9 98703831 + GTF3C4 chr9 135553364 + Exonic hg19 LGG TCGA-HT-7483 3 17 Out-of-frame Intra-chr q22.32 q34.13 Seq+ 32403 ChimerSeq STARFusion TCGA_RNA-Seq DLEU2-ATE1 DLEU2 chr13 50649695 - ATE1 chr10 123503373 - Exonic hg19 LGG TCGA-HT-7483 2 8 3'UTR-CDS Inter-chr q14.2 Tumor suppressor gene q26.13 Seq+ 32404 ChimerSeq STARFusion TCGA_RNA-Seq KRT8P1-GFAP KRT8P1 chr14 39197440 + GFAP chr17 42988023 - Exonic hg19 LGG TCGA-QH-A6CU 10 2 Out-of-frame Inter-chr q21.1 q21.31 32405 ChimerSeq STARFusion TCGA_RNA-Seq NPNT-GSTCD NPNT chr4 106819158 + GSTCD chr4 106744111 + Exonic hg19 LGG TCGA-QH-A6CV 22 98 In-Frame Intra-chr q24 q24 Seq+ 32406 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2B-NR1H3 PRRC2B chr9 134319715 + NR1H3 chr11 47282792 + Exonic hg19 LGG TCGA-QH-A6CV 16 85 In-Frame Inter-chr q34.13 p11.2 Transcription factor Seq+ 32407 ChimerSeq STARFusion TCGA_RNA-Seq SPOP-NBPF1 SPOP chr17 47688642 - NBPF1 chr1 16890681 - Exonic hg19 LGG TCGA-QH-A6CV 14 43 Out-of-frame Inter-chr q21.33 Oncogene Tumor suppressor gene p36.13 Seq+ 32408 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2B-NR1H3 PRRC2B chr9 134319715 + NR1H3 chr11 47281342 + Exonic hg19 LGG TCGA-QH-A6CV 3 83 In-Frame Inter-chr q34.13 p11.2 Transcription factor Seq+ 32409 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2B-NR1H3 PRRC2B chr9 134319715 + NR1H3 chr11 47280731 + Exonic hg19 LGG TCGA-QH-A6CV 2 83 CDS-5'UTR Inter-chr q34.13 p11.2 Transcription factor Seq+ 32410 ChimerSeq STARFusion TCGA_RNA-Seq GNAI3-GPR61 GNAI3 chr1 110091460 + GPR61 chr1 110087933 + Exonic hg19 LGG TCGA-QH-A6CV 5 16 CDS-3'UTR Intra-chr p13.3 p13.3 Seq+ 32411 ChimerSeq STARFusion TCGA_RNA-Seq TRAF4-FASN TRAF4 chr17 27071273 + FASN chr17 80038798 - Exonic hg19 LGG TCGA-QH-A6CV 4 17 Out-of-frame Intra-chr q11.2 q25.3 Seq+ 32412 ChimerSeq STARFusion TCGA_RNA-Seq RALY-ASIP RALY chr20 32581937 + ASIP chr20 32848171 + Exonic hg19 LGG TCGA-QH-A6CV 2 15 5'UTR-5'UTR Intra-chr q11.22 q11.22 32413 ChimerSeq STARFusion TCGA_RNA-Seq ABI2-HEXIM2 ABI2 chr2 204231767 + HEXIM2 chr17 43240117 + Exonic hg19 LGG TCGA-QH-A6CV 2 13 CDS-5'UTR Inter-chr q33.2 Tumor suppressor gene q21.31 Seq+ 32414 ChimerSeq STARFusion TCGA_RNA-Seq RTKN-M1AP RTKN chr2 74666678 - M1AP chr2 74834350 - Exonic hg19 LGG TCGA-QH-A6CW 5 67 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 32415 ChimerSeq STARFusion TCGA_RNA-Seq RTKN-M1AP RTKN chr2 74666678 - M1AP chr2 74808974 - Exonic hg19 LGG TCGA-QH-A6CW 2 67 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 32416 ChimerSeq STARFusion TCGA_RNA-Seq ASRGL1-RCC2 ASRGL1 chr11 62124616 + RCC2 chr1 17735690 - Exonic hg19 LGG TCGA-QH-A870 6 9 Out-of-frame Inter-chr q12.3 Seq+ 32417 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A19-EXOC7 SLC25A19 chr17 73279504 - EXOC7 chr17 74116535 - Exonic hg19 LGG TCGA-S9-A6WM 21 83 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 32418 ChimerSeq STARFusion TCGA_RNA-Seq ZNF564-CACNA1A ZNF564 chr19 12662144 - CACNA1A chr19 13397780 - Exonic hg19 LGG TCGA-S9-A6WM 4 9 Out-of-frame Intra-chr p13.2 Transcription factor p13.13 Seq+ 32419 ChimerSeq STARFusion TCGA_RNA-Seq TET3-DGUOK TET3 chr2 74230293 + DGUOK chr2 74173846 + Exonic hg19 LGG TCGA-S9-A6WL 108 189 5'UTR-CDS Intra-chr p13.1 Transcription factor p13.1 Seq+ 32420 ChimerSeq STARFusion TCGA_RNA-Seq BHLHE41-RERGL BHLHE41 chr12 26277651 - RERGL chr12 18296227 - Exonic hg19 LGG TCGA-S9-A6WO 4 13 CDS-5'UTR Intra-chr p12.1 Tumor suppressor gene Transcription factor p12.3 Seq+ 32421 ChimerSeq STARFusion TCGA_RNA-Seq BHLHE41-RERGL BHLHE41 chr12 26277651 - RERGL chr12 18241890 - Exonic hg19 LGG TCGA-S9-A6WO 3 13 Out-of-frame Intra-chr p12.1 Tumor suppressor gene Transcription factor p12.3 Seq+ 32422 ChimerSeq STARFusion TCGA_RNA-Seq SQSTM1-NTRK2 SQSTM1 chr5 179252226 + NTRK2 chr9 87549077 + Exonic hg19 LGG TCGA-DU-A76L 13 27 In-Frame Inter-chr q35.3 q21.33 Oncogene Seq+ 32423 ChimerSeq STARFusion TCGA_RNA-Seq CPLX1-GAK CPLX1 chr4 818280 - GAK chr4 845762 - Exonic hg19 LGG TCGA-S9-A6WE 3 35 In-Frame Intra-chr p16.3 p16.3 Other:NAK Seq+ 32424 ChimerSeq STARFusion TCGA_RNA-Seq CPLX1-GAK CPLX1 chr4 818280 - GAK chr4 844872 - Exonic hg19 LGG TCGA-S9-A6WE 2 34 In-Frame Intra-chr p16.3 p16.3 Other:NAK Seq+ 32425 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 LGG TCGA-S9-A6WE 3 6 CDS-5'UTR Intra-chr q23 Seq+ 32426 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010683 - TTC18 chr10 75016175 - Exonic hg19 LGG TCGA-S9-A6WD 41 220 Out-of-frame Intra-chr q22.2 32427 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75011521 - TTC18 chr10 75016174 - Exonic hg19 LGG TCGA-S9-A6WD 29 217 Out-of-frame Intra-chr q22.2 32428 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010573 - TTC18 chr10 75016174 - Exonic hg19 LGG TCGA-S9-A6WD 21 217 3'UTR-CDS Intra-chr q22.2 32429 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010596 - TTC18 chr10 75016174 - Exonic hg19 LGG TCGA-S9-A6WD 19 217 3'UTR-CDS Intra-chr q22.2 32430 ChimerSeq STARFusion TCGA_RNA-Seq USP32-SPANXN4 USP32 chr17 58422842 - SPANXN4 chrX 142121811 + Exonic hg19 LGG TCGA-S9-A6WG 2 11 In-Frame Inter-chr q23.2 q27.3 Seq+ 32431 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 LGG TCGA-FG-7643 1754 5678 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 32432 ChimerSeq STARFusion TCGA_RNA-Seq ADCY9-TEAD4 ADCY9 chr16 4163751 - TEAD4 chr12 3103904 + Exonic hg19 LGG TCGA-TM-A84I 61 262 CDS-5'UTR Inter-chr p13.3 p13.33 Transcription factor Seq+ 32433 ChimerSeq STARFusion TCGA_RNA-Seq MARCH9-SLCO1B1 2019_ 3_ 9_ chr12 58150867 + SLCO1B1 chr12 21325584 + Exonic hg19 LGG TCGA-TM-A84I 36 135 Out-of-frame Intra-chr q14.1 p12.1 Seq+ 32434 ChimerSeq STARFusion TCGA_RNA-Seq CCNF-NOL4 CCNF chr16 2489827 + NOL4 chr18 31673561 - Exonic hg19 LGG TCGA-TM-A84I 10 144 In-Frame Inter-chr p13.3 q12.1 Seq+ 32435 ChimerSeq STARFusion TCGA_RNA-Seq GALNT1-TAF4B GALNT1 chr18 33234765 + TAF4B chr18 23937654 + Exonic hg19 LGG TCGA-TM-A84I 31 41 Out-of-frame Intra-chr q12.2 q11.2 Seq+ 32436 ChimerSeq STARFusion TCGA_RNA-Seq LYST-NARS2 LYST chr1 236030143 - NARS2 chr11 78177059 - Exonic hg19 LGG TCGA-TM-A84I 32 16 5'UTR-CDS Inter-chr q42.3 q14.1 Seq+ 32437 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN9-LINC00592 TSPAN9 chr12 3192885 + LINC00592 chr12 52617230 + Exonic hg19 LGG TCGA-TM-A84I 12 64 5'UTR-5'UTR Intra-chr p13.33 q13.13 Seq+ 32438 ChimerSeq STARFusion TCGA_RNA-Seq ST8SIA1-FTO ST8SIA1 chr12 22401940 - FTO chr16 54145674 + Exonic hg19 LGG TCGA-TM-A84I 7 46 In-Frame Inter-chr p12.1 q12.2 Seq+ 32439 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN9-KRT7 TSPAN9 chr12 3192885 + KRT7 chr12 52628939 + Exonic hg19 LGG TCGA-TM-A84I 10 29 5'UTR-CDS Intra-chr p13.33 q13.13 Seq+ 32440 ChimerSeq STARFusion TCGA_RNA-Seq ADCY9-RASSF8 ADCY9 chr16 4163751 - RASSF8 chr12 26231966 + Exonic hg19 LGG TCGA-TM-A84I 9 23 In-Frame Inter-chr p13.3 p12.1 Tumor suppressor gene Seq+ 32441 ChimerSeq STARFusion TCGA_RNA-Seq NTHL1-KLRC3 NTHL1 chr16 2097710 - KLRC3 chr12 10565215 - Exonic hg19 LGG TCGA-TM-A84I 4 23 Out-of-frame Inter-chr p13.3 p13.2 Seq+ 32442 ChimerSeq STARFusion TCGA_RNA-Seq RAD17-CNTN5 RAD17 chr5 68677884 + CNTN5 chr11 100226848 + Exonic hg19 LGG TCGA-TM-A84I 4 23 In-Frame Inter-chr q22.1 Seq+ 32443 ChimerSeq STARFusion TCGA_RNA-Seq MAML2-ANKMY2 MAML2 chr11 96074547 - ANKMY2 chr7 16666803 - Exonic hg19 LGG TCGA-TM-A84I 5 18 In-Frame Inter-chr q21 Oncogene p21.1 Seq+ 32444 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN9-KRT7 TSPAN9 chr12 3186619 + KRT7 chr12 52628939 + Exonic hg19 LGG TCGA-TM-A84I 2 27 5'UTR-CDS Intra-chr p13.33 q13.13 Seq+ 32445 ChimerSeq STARFusion TCGA_RNA-Seq PGBD2-UBE4A PGBD2 chr1 249211600 + UBE4A chr11 118253304 + Exonic hg19 LGG TCGA-TM-A84I 7 6 Out-of-frame Inter-chr q44 q23.3 Seq+ 32446 ChimerSeq STARFusion TCGA_RNA-Seq GRIN2A-RASSF8 GRIN2A chr16 10273855 - RASSF8 chr12 26208212 + Exonic hg19 LGG TCGA-TM-A84I 2 21 CDS-5'UTR Inter-chr p13.2 Tumor suppressor gene p12.1 Tumor suppressor gene Seq+ 32447 ChimerSeq STARFusion TCGA_RNA-Seq SSPN-TEAD4 SSPN chr12 26287963 + TEAD4 chr12 3103904 + Exonic hg19 LGG TCGA-TM-A84I 3 16 5'UTR-5'UTR Intra-chr p12.1 p13.33 Transcription factor Seq+ 32448 ChimerSeq STARFusion TCGA_RNA-Seq SLCO1B1-LINC00592 SLCO1B1 chr12 21358967 + LINC00592 chr12 52617230 + Exonic hg19 LGG TCGA-TM-A84I 4 9 CDS-5'UTR Intra-chr p12.1 q13.13 32449 ChimerSeq STARFusion TCGA_RNA-Seq ADCY9-OS9 ADCY9 chr16 4163751 - OS9 chr12 58109543 + Exonic hg19 LGG TCGA-TM-A84I 4 5 Out-of-frame Inter-chr p13.3 q13.3 32450 ChimerSeq STARFusion TCGA_RNA-Seq CCDC91-KRT7 CCDC91 chr12 28343574 + KRT7 chr12 52628939 + Exonic hg19 LGG TCGA-TM-A84I 4 4 5'UTR-CDS Intra-chr p11.22 q13.13 Seq+ 32451 ChimerSeq STARFusion TCGA_RNA-Seq DTX3-PLEKHA5 DTX3 chr12 57998641 + PLEKHA5 chr12 19473496 + Exonic hg19 LGG TCGA-TM-A84I 4 4 5'UTR-CDS Intra-chr q13.3 p12.3 Seq+ 32452 ChimerSeq STARFusion TCGA_RNA-Seq RAB6A-B4GALNT3 RAB6A chr11 73418465 - B4GALNT3 chr12 644332 + Exonic hg19 LGG TCGA-TM-A84I 2 12 Out-of-frame Inter-chr q13.4 p13.33 Seq+ 32453 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 LGG TCGA-TM-A84I 2 5 CDS-5'UTR Intra-chr q23 Seq+ 32454 ChimerSeq STARFusion TCGA_RNA-Seq DLGAP1-TGIF1 DLGAP1 chr18 4455006 - TGIF1 chr18 3456352 + Exonic hg19 LGG TCGA-DU-7306 6 40 5'UTR-5'UTR Intra-chr p11.31 p11.31 Transcription factor Seq+ 32455 ChimerSeq STARFusion TCGA_RNA-Seq KRT8P1-GFAP KRT8P1 chr14 39197438 + GFAP chr17 42988025 - Exonic hg19 LGG TCGA-P5-A731 6 4 Out-of-frame Inter-chr q21.1 q21.31 32456 ChimerSeq STARFusion TCGA_RNA-Seq GFAP-STT3A GFAP chr17 42989088 - STT3A chr11 125484214 + Exonic hg19 LGG TCGA-P5-A736 4 3 Out-of-frame Inter-chr q21.31 q24.2 32457 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 LGG TCGA-DU-5852 5 5 CDS-5'UTR Intra-chr q23 Seq+ 32458 ChimerSeq STARFusion TCGA_RNA-Seq TP53-GID4 TP53 chr17 7590695 - GID4 chr17 17948461 + Exonic hg19 LGG TCGA-DU-5853 5 32 Out-of-frame Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p11.2 Seq+ 32459 ChimerSeq STARFusion TCGA_RNA-Seq LPHN3-GPM6A LPHN3 chr4 62679607 + GPM6A chr4 176622918 - Exonic hg19 LGG TCGA-DU-5854 4 5 In-Frame Intra-chr q34.2 32460 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-DYNC1I1 PTPN12 chr7 77166962 + DYNC1I1 chr7 95705369 + Exonic hg19 LGG TCGA-DU-5855 104 250 In-Frame Intra-chr q11.23 Tumor suppressor gene q21.3 Seq+ 32461 ChimerSeq STARFusion TCGA_RNA-Seq CAMK2D-ANK2 CAMK2D chr4 114436225 - ANK2 chr4 114179206 + Exonic hg19 LGG TCGA-DU-5855 12 32 In-Frame Intra-chr q26 q25 Seq+ 32462 ChimerSeq STARFusion TCGA_RNA-Seq BRAP-KLRB1 BRAP chr12 112123515 - KLRB1 chr12 9754195 - Exonic hg19 LGG TCGA-RY-A83Z 9 26 In-Frame Intra-chr q24.12 p13.31 Seq+ 32463 ChimerSeq STARFusion TCGA_RNA-Seq AMBRA1-CCDC61 AMBRA1 chr11 46615378 - CCDC61 chr19 46506266 + Exonic hg19 LGG TCGA-DH-5142 8 21 5'UTR-CDS Inter-chr p11.2 q13.32 Seq+ 32464 ChimerSeq STARFusion TCGA_RNA-Seq CCDC61-CHST1 CCDC61 chr19 46509637 + CHST1 chr11 45686805 - Exonic hg19 LGG TCGA-DH-5142 3 23 Out-of-frame Inter-chr q13.32 p11.2 Seq+ 32465 ChimerSeq STARFusion TCGA_RNA-Seq CCDC61-CHST1 CCDC61 chr19 46506759 + CHST1 chr11 45674156 - Exonic hg19 LGG TCGA-DH-5142 2 23 CDS-5'UTR Inter-chr q13.32 p11.2 Seq+ 32466 ChimerSeq STARFusion TCGA_RNA-Seq AMBRA1-CHST1 AMBRA1 chr11 46615378 - CHST1 chr11 45674156 - Exonic hg19 LGG TCGA-DH-5142 2 10 5'UTR-5'UTR Intra-chr p11.2 p11.2 32467 ChimerSeq STARFusion TCGA_RNA-Seq SOX10-FAM168A SOX10 chr22 38373874 - FAM168A chr11 73122581 - Exonic hg19 LGG TCGA-DH-5140 79 427 In-Frame Inter-chr q13.1 Transcription factor q13.4 Seq+ 32468 ChimerSeq STARFusion TCGA_RNA-Seq B3GALT5-IGSF5 B3GALT5 chr21 40977152 + IGSF5 chr21 41137462 + Exonic hg19 LGG TCGA-QH-A6XA 2 14 5'UTR-CDS Intra-chr q22.2 q22.2 32469 ChimerSeq STARFusion TCGA_RNA-Seq NRBP1-DROSHA NRBP1 chr2 27651598 + DROSHA chr5 31410994 - Exonic hg19 LGG TCGA-QH-A6XC 30 99 5'UTR-CDS Inter-chr p23.3 Other:NRBP Tumor suppressor gene p13.3 Seq+ 32470 ChimerSeq STARFusion TCGA_RNA-Seq CTNND2-NRBP1 CTNND2 chr5 11732248 - NRBP1 chr2 27656540 + Exonic hg19 LGG TCGA-QH-A6XC 15 101 In-Frame Inter-chr p15.2 p23.3 Other:NRBP Tumor suppressor gene Seq+ 32471 ChimerSeq STARFusion TCGA_RNA-Seq RER1-DNAH7 RER1 chr1 2335028 + DNAH7 chr2 196621009 - Exonic hg19 LGG TCGA-QH-A6XC 3 23 3'UTR-CDS Inter-chr p36.32 q32.3 Seq+ 32472 ChimerSeq STARFusion TCGA_RNA-Seq C2orf42-MRPL33 C2orf42 chr2 70475537 - MRPL33 chr2 28002300 + Exonic hg19 LGG TCGA-QH-A6XC 2 22 5'UTR-CDS Intra-chr p13.3 p23.2 Seq+ 32473 ChimerSeq STARFusion TCGA_RNA-Seq TIA1-MRPL33 TIA1 chr2 70475537 - MRPL33 chr2 28002300 + Exonic hg19 LGG TCGA-QH-A6XC 2 22 In-Frame Intra-chr p13.3 p23.2 Seq+ 32474 ChimerSeq STARFusion TCGA_RNA-Seq ARID1B-ZDHHC14 ARID1B chr6 157256710 + ZDHHC14 chr6 157963617 + Exonic hg19 LGG TCGA-QH-A6XC 4 6 Out-of-frame Intra-chr q25.3 Oncogene q25.3 32475 ChimerSeq STARFusion TCGA_RNA-Seq MYCBP2-PIBF1 MYCBP2 chr13 77730193 - PIBF1 chr13 73547729 + Exonic hg19 LGG TCGA-QH-A6X9 2 29 Out-of-frame Intra-chr q22.3 q21.33 Seq+ 32476 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983374 - RSRC2 chr12 122990253 - Exonic hg19 LGG TCGA-HW-7487 106 490 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 32477 ChimerSeq STARFusion TCGA_RNA-Seq VPS53-GLOD4 VPS53 chr17 613773 - GLOD4 chr17 689217 - Exonic hg19 LGG TCGA-HW-7487 3 27 CDS-5'UTR Intra-chr Tumor suppressor gene p13.3 Seq+ 32478 ChimerSeq STARFusion TCGA_RNA-Seq IFNAR2-C21orf49 IFNAR2 chr21 34625135 + C21orf49 chr21 34265886 + Exonic hg19 LGG TCGA-DU-8158 3 12 CDS-3'UTR Intra-chr q22.11 32479 ChimerSeq STARFusion TCGA_RNA-Seq IFNAR2-C21orf49 IFNAR2 chr21 34625135 + C21orf49 chr21 34258240 + Exonic hg19 LGG TCGA-DU-8158 2 12 CDS-3'UTR Intra-chr q22.11 32480 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0100-SLC13A4 KIAA0100 chr17 26972091 - SLC13A4 chr7 135391051 - Exonic hg19 LGG TCGA-P5-A5F6 23 1 Out-of-frame Inter-chr q11.2 q33 32481 ChimerSeq STARFusion TCGA_RNA-Seq PPM1A-ADCK4 PPM1A chr14 60716395 + ADCK4 chr19 41220302 - Exonic hg19 LGG TCGA-P5-A5F2 2 9 5'UTR-CDS Inter-chr q23.1 Tumor suppressor gene Atypical:ABC1 Seq+ 32482 ChimerSeq STARFusion TCGA_RNA-Seq KRT8P1-GFAP KRT8P1 chr14 39197440 + GFAP chr17 42988023 - Exonic hg19 LGG TCGA-DB-A75K 13 5 Out-of-frame Inter-chr q21.1 q21.31 32483 ChimerSeq STARFusion TCGA_RNA-Seq GFAP-CRYAB GFAP chr17 42983461 - CRYAB chr11 111782468 - Exonic hg19 LGG TCGA-DB-A75M 4 58 Out-of-frame Inter-chr q21.31 q23.1 32484 ChimerSeq STARFusion TCGA_RNA-Seq NRXN2-APOE NRXN2 chr11 64391039 - APOE chr19 45411017 + Exonic hg19 LGG TCGA-DB-A75O 6 1 Out-of-frame Inter-chr q13.1 q13.32 32485 ChimerSeq STARFusion TCGA_RNA-Seq ALDH2-GFAP ALDH2 chr12 112247547 + GFAP chr17 42983535 - Exonic hg19 LGG TCGA-DB-A75O 3 10 Out-of-frame Inter-chr q24.12 q21.31 32486 ChimerSeq STARFusion TCGA_RNA-Seq NMT1-NLK NMT1 chr17 43173653 + NLK chr17 26374943 + Exonic hg19 LGG TCGA-DB-A75O 2 5 Out-of-frame Intra-chr q21.31 q11.2 CMGC:MAPK Seq+ 32487 ChimerSeq STARFusion TCGA_RNA-Seq NUAK2-CYB5R1 NUAK2 chr1 205290526 - CYB5R1 chr1 202936026 - Exonic hg19 LGG TCGA-HT-8011 4 17 In-Frame Intra-chr q32.1 q32.1 Seq+ 32488 ChimerSeq STARFusion TCGA_RNA-Seq KRT8P1-GFAP KRT8P1 chr14 39197440 + GFAP chr17 42988023 - Exonic hg19 LGG TCGA-QH-A65S 3 3 Out-of-frame Inter-chr q21.1 q21.31 32489 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF3-CRYBB2 ZNRF3 chr22 29280054 + CRYBB2 chr22 25617371 + Exonic hg19 LGG TCGA-HT-A74H 9 51 CDS-5'UTR Intra-chr q12.1 q11.23 Seq+ 32490 ChimerSeq STARFusion TCGA_RNA-Seq NFIB-BMPR1B NFIB chr9 14054839 - BMPR1B chr4 96076635 + Exonic hg19 LGG TCGA-S9-A6TX 3 7 Out-of-frame Inter-chr p22.3 Transcription factor q22.3 TKL:STKR 32491 ChimerSeq STARFusion TCGA_RNA-Seq KRT8P1-GFAP KRT8P1 chr14 39197440 + GFAP chr17 42988023 - Exonic hg19 LGG TCGA-S9-A6TZ 10 2 Out-of-frame Inter-chr q21.1 q21.31 32492 ChimerSeq STARFusion TCGA_RNA-Seq SRP14-FOXP2 SRP14 chr15 40328539 - FOXP2 chr7 114269980 + Exonic hg19 LGG TCGA-QH-A65V 3 4 Out-of-frame Inter-chr q15.1 q31.1 Transcription factor 32493 ChimerSeq STARFusion TCGA_RNA-Seq TMEM91-TGFB1 TMEM91 chr19 41870000 + TGFB1 chr19 41838186 - Exonic hg19 LGG TCGA-CS-4944 4 14 5'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 32494 ChimerSeq STARFusion TCGA_RNA-Seq TMLHE-CMC4 TMLHE chrX 154774757 - CMC4 chrX 154292308 - Exonic hg19 LGG TCGA-CS-4942 3 27 Out-of-frame Intra-chr q28 q28 32495 ChimerSeq STARFusion TCGA_RNA-Seq TMLHE-MTCP1 TMLHE chrX 154774757 - MTCP1 chrX 154292308 - Exonic hg19 LGG TCGA-CS-4942 3 27 CDS-3'UTR Intra-chr q28 q28 32496 ChimerSeq STARFusion TCGA_RNA-Seq REV3L-FN3KRP REV3L chr6 111628564 - FN3KRP chr17 80684356 + Exonic hg19 LGG TCGA-CS-4942 2 27 In-Frame Inter-chr q21 q25.3 Seq+ 32497 ChimerSeq STARFusion TCGA_RNA-Seq FMR1-AFF2 FMR1 chrX 147003503 + AFF2 chrX 147733520 + Exonic hg19 LGG TCGA-CS-4942 2 23 In-Frame Intra-chr q27.3 q28 Seq+ 32498 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K13-UTS2B MAP3K13 chr3 185081156 + UTS2B chr3 191046498 - Exonic hg19 LGG TCGA-CS-4942 3 17 Out-of-frame Intra-chr q27.2 q28 Seq+ 32499 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K13-UTS2B MAP3K13 chr3 185003431 + UTS2B chr3 191022337 - Exonic hg19 LGG TCGA-CS-4942 2 17 Out-of-frame Intra-chr q27.2 q28 Seq+ 32500 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K13-UTS2B MAP3K13 chr3 185081156 + UTS2B chr3 191000102 - Exonic hg19 LGG TCGA-CS-4942 2 17 Out-of-frame Intra-chr q27.2 q28 Seq+ 32501 ChimerSeq STARFusion TCGA_RNA-Seq RAD51AP1-ST8SIA1 RAD51AP1 chr12 4648122 + ST8SIA1 chr12 22402032 - Exonic hg19 LGG TCGA-CS-4943 37 107 In-Frame Intra-chr p13.32 p12.1 Seq+ 32502 ChimerSeq STARFusion TCGA_RNA-Seq TOMM70A-KCTD8 TOMM70A chr3 100119470 - KCTD8 chr4 44177267 - Exonic hg19 LGG TCGA-CS-4943 24 125 Out-of-frame Inter-chr p13 Seq+ 32503 ChimerSeq STARFusion TCGA_RNA-Seq ARL5B-CCDC102B ARL5B chr10 18948612 + CCDC102B chr18 66383765 + Exonic hg19 LGG TCGA-CS-4943 3 11 CDS-5'UTR Inter-chr p12.31 q22.1 Seq+ 32504 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 LGG TCGA-CS-4943 4 6 CDS-5'UTR Intra-chr q23 Seq+ 32505 ChimerSeq STARFusion TCGA_RNA-Seq CLU-GFAP CLU chr8 27462461 - GFAP chr17 42984508 - Exonic hg19 LGG TCGA-HT-7608 5 216 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q21.31 Seq+ 32506 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-PTPRB CPSF6 chr12 69633486 + PTPRB chr12 70975082 - Exonic hg19 LGG TCGA-CS-4941 970 3384 Out-of-frame Intra-chr q15 q15 Seq+ 32507 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN31-GFAP TSPAN31 chr12 58142200 + GFAP chr17 42991136 - Exonic hg19 LGG TCGA-CS-4941 3 113 Out-of-frame Inter-chr q14.1 q21.31 32508 ChimerSeq STARFusion TCGA_RNA-Seq ZNF136-NFIX ZNF136 chr19 12274021 + NFIX chr19 13135835 + Exonic hg19 LGG TCGA-HT-7604 41 91 In-Frame Intra-chr p13.2 Transcription factor p13.13 Transcription factor Seq+ 32509 ChimerSeq STARFusion TCGA_RNA-Seq RANBP9-BLOC1S5 RANBP9 chr6 13697017 - BLOC1S5 chr6 8016061 - Exonic hg19 LGG TCGA-HT-7604 5 23 Out-of-frame Intra-chr p23 Tumor suppressor gene p24.3 Seq+ 32510 ChimerSeq STARFusion TCGA_RNA-Seq RANBP9-TXNDC5 RANBP9 chr6 13697017 - TXNDC5 chr6 7904956 - Exonic hg19 LGG TCGA-HT-7604 3 5 In-Frame Intra-chr p23 Tumor suppressor gene p24.3 Seq+ 32511 ChimerSeq STARFusion TCGA_RNA-Seq ISCA1-GOLM1 ISCA1 chr9 88886922 - GOLM1 chr9 88694256 - Exonic hg19 LGG TCGA-HT-7604 2 6 CDS-5'UTR Intra-chr q21.33 q21.33 32512 ChimerSeq STARFusion TCGA_RNA-Seq LYN-TGS1 LYN chr8 56879456 + TGS1 chr8 56723440 + Exonic hg19 LGG TCGA-HT-7602 4 26 In-Frame Intra-chr q12.1 TK:Src q12.1 Tumor suppressor gene 32513 ChimerSeq STARFusion TCGA_RNA-Seq SYNJ1-PDE9A SYNJ1 chr21 34099083 - PDE9A chr21 44163886 + Exonic hg19 LGG TCGA-HT-7603 6 17 In-Frame Intra-chr q22.11 q22.3 Seq+ 32514 ChimerSeq STARFusion TCGA_RNA-Seq PDE9A-DHRS7 PDE9A chr21 44153536 + DHRS7 chr14 60622870 - Exonic hg19 LGG TCGA-HT-7603 2 14 In-Frame Inter-chr q22.3 q23.1 Seq+ 32515 ChimerSeq STARFusion TCGA_RNA-Seq OIP5-MRPL21 OIP5 chr15 41624754 - MRPL21 chr11 68671284 - Exonic hg19 LGG TCGA-HT-A74K 6 0 Out-of-frame Inter-chr q15.1 q13.3 32516 ChimerSeq STARFusion TCGA_RNA-Seq NELFB-EXD3 NELFB chr9 140151506 + EXD3 chr9 140218595 - Exonic hg19 LGG TCGA-HT-A74J 10 35 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 32517 ChimerSeq STARFusion TCGA_RNA-Seq ATRX-ZNF304 ATRX chrX 77041468 - ZNF304 chr19 57865093 + Exonic hg19 LGG TCGA-CS-6290 10 51 Out-of-frame Inter-chr q21.1 Oncogene q13.43 Transcription factor Seq+ 32518 ChimerSeq STARFusion TCGA_RNA-Seq ATRX-ZNF304 ATRX chrX 77041468 - ZNF304 chr19 57862889 + Exonic hg19 LGG TCGA-CS-6290 5 51 CDS-5'UTR Inter-chr q21.1 Oncogene q13.43 Transcription factor Seq+ 32519 ChimerSeq STARFusion TCGA_RNA-Seq B3GALT5-IGSF5 B3GALT5 chr21 40977152 + IGSF5 chr21 41137462 + Exonic hg19 LGG TCGA-RY-A840 3 4 5'UTR-CDS Intra-chr q22.2 q22.2 32520 ChimerSeq STARFusion TCGA_RNA-Seq MICA-NCR3 MICA chr6 31371479 + NCR3 chr6 31557903 - Exonic hg19 LGG TCGA-WH-A86K 2 24 In-Frame Intra-chr p21.33 Seq+ 32521 ChimerSeq STARFusion TCGA_RNA-Seq SEC24A-KCNK7 SEC24A chr5 133984863 + KCNK7 chr11 65361345 - Exonic hg19 LGG TCGA-VM-A8CD 50 140 In-Frame Inter-chr q31.1 q13.1 Seq+ 32522 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF10L-PADI4 ARHGEF10L chr1 17965808 + PADI4 chr1 17664533 + Exonic hg19 LGG TCGA-VM-A8CD 3 27 Out-of-frame Intra-chr p36.13 Seq+ 32523 ChimerSeq STARFusion TCGA_RNA-Seq SPEN-TTC34 SPEN chr1 16203173 + TTC34 chr1 2577002 - Exonic hg19 LGG TCGA-VM-A8CD 3 18 Out-of-frame Intra-chr p36.21 Transcription factor Seq+ 32524 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF4-CYP4F43P ARHGEF4 chr2 131704208 + CYP4F43P chr2 131197051 - Exonic hg19 LGG TCGA-VM-A8CD 2 19 Out-of-frame Intra-chr q21.1 32525 ChimerSeq STARFusion TCGA_RNA-Seq EYA2-LHX2 EYA2 chr20 45644936 + LHX2 chr9 126776240 + Exonic hg19 LGG TCGA-VM-A8CD 3 13 Out-of-frame Inter-chr q13.12 q33.3 Transcription factor Seq+ 32526 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-LSAMP ZBTB20 chr3 114619151 - LSAMP chr3 115571464 - Exonic hg19 LGG TCGA-E1-5307 45 107 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.31 Tumor suppressor gene Seq+ 32527 ChimerSeq STARFusion TCGA_RNA-Seq KCNC3-ZNF530 KCNC3 chr19 50836726 - ZNF530 chr19 58123871 + Exonic hg19 LGG TCGA-E1-5305 2 14 Out-of-frame Intra-chr q13.33 q13.43 Transcription factor Seq+ 32528 ChimerSeq STARFusion TCGA_RNA-Seq LRP6-NINJ2 LRP6 chr12 12332744 - NINJ2 chr12 675344 - Exonic hg19 LGG TCGA-E1-5304 94 447 In-Frame Intra-chr p13.33 Seq+ 32529 ChimerSeq STARFusion TCGA_RNA-Seq KCNJ10-CISD2 KCNJ10 chr1 160039812 - CISD2 chr4 103806373 + Exonic hg19 LGG TCGA-E1-5304 32 330 5'UTR-CDS Inter-chr q23.2 q24 Seq+ 32530 ChimerSeq STARFusion TCGA_RNA-Seq ZNF292-5S_rRNA ZNF292 chr6 87928449 + 5S_rRNA chr16 34983132 + Exonic hg19 LGG TCGA-E1-5304 46 191 Out-of-frame Inter-chr q14.3 Tumor suppressor gene Transcription factor q11.21 32531 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD6-ZDHHC14 ANKRD6 chr6 90276815 + ZDHHC14 chr6 158049381 + Exonic hg19 LGG TCGA-E1-5304 27 145 Out-of-frame Intra-chr q15 q25.3 Seq+ 32532 ChimerSeq STARFusion TCGA_RNA-Seq ARID1B-PREP ARID1B chr6 157150555 + PREP chr6 105845802 - Exonic hg19 LGG TCGA-E1-5304 14 99 In-Frame Intra-chr q25.3 Oncogene q21 Seq+ 32533 ChimerSeq STARFusion TCGA_RNA-Seq FYTTD1-ALDH1A3 FYTTD1 chr3 197505335 + ALDH1A3 chr15 101427777 + Exonic hg19 LGG TCGA-E1-5304 15 47 In-Frame Inter-chr q29 q26.3 Seq+ 32534 ChimerSeq STARFusion TCGA_RNA-Seq ABCA2-TRIM14 ABCA2 chr9 139922527 - TRIM14 chr9 100862446 - Exonic hg19 LGG TCGA-E1-5304 15 44 In-Frame Intra-chr q34.3 q22.33 Seq+ 32535 ChimerSeq STARFusion TCGA_RNA-Seq NCAM2-CYP4F29P NCAM2 chr21 22370936 + CYP4F29P chr21 15218462 - Exonic hg19 LGG TCGA-E1-5304 9 68 Out-of-frame Intra-chr q21.1 Tumor suppressor gene q11.2 Seq+ 32536 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K4-METTL24 MAP3K4 chr6 161471011 + METTL24 chr6 110636684 - Exonic hg19 LGG TCGA-E1-5304 11 41 In-Frame Intra-chr q26 STE:STE11 Tumor suppressor gene q21 Seq+ 32537 ChimerSeq STARFusion TCGA_RNA-Seq ZNF790-RHPN2 ZNF790 chr19 37329239 - RHPN2 chr19 33535270 - Exonic hg19 LGG TCGA-E1-5304 8 37 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.11 Seq+ 32538 ChimerSeq STARFusion TCGA_RNA-Seq PCYT1B-SIAH1 PCYT1B chrX 24593247 - SIAH1 chr16 48396341 - Exonic hg19 LGG TCGA-E1-5304 5 48 Out-of-frame Inter-chr p22.11 q12.1 Tumor suppressor gene Seq+ 32539 ChimerSeq STARFusion TCGA_RNA-Seq PCYT1B-SIAH1 PCYT1B chrX 24593247 - SIAH1 chr16 48437578 - Exonic hg19 LGG TCGA-E1-5304 3 48 CDS-5'UTR Inter-chr p22.11 q12.1 Tumor suppressor gene Seq+ 32540 ChimerSeq STARFusion TCGA_RNA-Seq ZNF790-RHPN2 ZNF790 chr19 37340904 - RHPN2 chr19 33535270 - Exonic hg19 LGG TCGA-E1-5304 6 34 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.11 Seq+ 32541 ChimerSeq STARFusion TCGA_RNA-Seq ABCA2-TRIM14 ABCA2 chr9 139923169 - TRIM14 chr9 100862446 - Exonic hg19 LGG TCGA-E1-5304 3 44 In-Frame Intra-chr q34.3 q22.33 Seq+ 32542 ChimerSeq STARFusion TCGA_RNA-Seq B3GALT5-IGSF5 B3GALT5 chr21 40977152 + IGSF5 chr21 41137462 + Exonic hg19 LGG TCGA-E1-5304 5 12 5'UTR-CDS Intra-chr q22.2 q22.2 32543 ChimerSeq STARFusion TCGA_RNA-Seq HMGCS1-OXCT1 HMGCS1 chr5 43307868 - OXCT1 chr5 41862852 - Exonic hg19 LGG TCGA-E1-5304 3 20 5'UTR-CDS Intra-chr p12 p13.1 Seq+ 32544 ChimerSeq STARFusion TCGA_RNA-Seq RIMKLB-ITFG2 RIMKLB chr12 8853210 + ITFG2 chr12 2926389 + Exonic hg19 LGG TCGA-E1-5304 3 19 5'UTR-CDS Intra-chr p13.31 p13.33 Seq+ 32545 ChimerSeq STARFusion TCGA_RNA-Seq ASCC3-SERINC1 ASCC3 chr6 101163338 - SERINC1 chr6 122768149 - Exonic hg19 LGG TCGA-E1-5304 5 7 Out-of-frame Intra-chr q16.3 q22.31 Seq+ 32546 ChimerSeq STARFusion TCGA_RNA-Seq C9orf131-VCP C9orf131 chr9 35043269 + VCP chr9 35064282 - Exonic hg19 LGG TCGA-E1-5304 4 11 Out-of-frame Intra-chr p13.3 p13.3 32547 ChimerSeq STARFusion TCGA_RNA-Seq CKS2-PCSK5 CKS2 chr9 91930212 + PCSK5 chr9 78789902 + Exonic hg19 LGG TCGA-E1-5304 2 19 In-Frame Intra-chr q22.2 q21.13 Seq+ 32548 ChimerSeq STARFusion TCGA_RNA-Seq HMGCS1-OXCT1 HMGCS1 chr5 43313458 - OXCT1 chr5 41862852 - Exonic hg19 LGG TCGA-E1-5304 2 19 5'UTR-CDS Intra-chr p12 p13.1 Seq+ 32549 ChimerSeq STARFusion TCGA_RNA-Seq PHF2-HIATL2 PHF2 chr9 96339153 + HIATL2 chr9 99711964 - Exonic hg19 LGG TCGA-E1-5304 3 13 CDS-3'UTR Intra-chr q22.31 32550 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 LGG TCGA-E1-5304 5 3 CDS-5'UTR Intra-chr q23 Seq+ 32551 ChimerSeq STARFusion TCGA_RNA-Seq COPZ1-PPP1R1A COPZ1 chr12 54718965 + PPP1R1A chr12 54974834 - Exonic hg19 LGG TCGA-E1-5304 4 3 Out-of-frame Intra-chr q13.13 q13.2 Seq+ 32552 ChimerSeq STARFusion TCGA_RNA-Seq TIMM23-PRKG1 TIMM23 chr10 51606988 - PRKG1 chr10 53564345 + Exonic hg19 LGG TCGA-E1-5304 3 7 In-Frame Intra-chr q11.22 q11.23 Seq+ 32553 ChimerSeq STARFusion TCGA_RNA-Seq DDX58-CHRM3 DDX58 chr9 32466288 - CHRM3 chr1 240049389 + Exonic hg19 LGG TCGA-E1-5304 3 6 CDS-5'UTR Inter-chr p21.1 Tumor suppressor gene q43 Seq+ 32554 ChimerSeq STARFusion TCGA_RNA-Seq MPV17L-XPO6 MPV17L chr16 15490064 + XPO6 chr16 28124371 - Exonic hg19 LGG TCGA-E1-5304 2 6 Out-of-frame Intra-chr p13.11 p12.1 Seq+ 32555 ChimerSeq STARFusion TCGA_RNA-Seq GFAP-MBP GFAP chr17 42983671 - MBP chr18 74692310 - Exonic hg19 LGG TCGA-E1-5303 3 81 Out-of-frame Inter-chr q21.31 q23 32556 ChimerSeq STARFusion TCGA_RNA-Seq MED13L-MYBPC1 MED13L chr12 116444111 - MYBPC1 chr12 102061510 + Exonic hg19 LGG TCGA-E1-5303 7 49 In-Frame Intra-chr q24.21 q23.2 Seq+ 32557 ChimerSeq STARFusion TCGA_RNA-Seq PXN-MYBPC1 PXN chr12 120703420 - MYBPC1 chr12 102041823 + Exonic hg19 LGG TCGA-E1-5303 5 17 In-Frame Intra-chr q24.23 q23.2 Seq+ 32558 ChimerSeq STARFusion TCGA_RNA-Seq ARMC8-CLDN18 ARMC8 chr3 137906441 + CLDN18 chr3 137742500 + Exonic hg19 LGG TCGA-E1-5303 5 7 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 32559 ChimerSeq STARFusion TCGA_RNA-Seq KRT8P1-GFAP KRT8P1 chr14 39197438 + GFAP chr17 42988025 - Exonic hg19 LGG TCGA-E1-5303 5 6 Out-of-frame Inter-chr q21.1 q21.31 32560 ChimerSeq STARFusion TCGA_RNA-Seq ARMC8-CLDN18 ARMC8 chr3 137928735 + CLDN18 chr3 137742500 + Exonic hg19 LGG TCGA-E1-5303 3 7 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 32561 ChimerSeq STARFusion TCGA_RNA-Seq GFAP-ENO1 GFAP chr17 42984253 - ENO1 chr1 8928093 - Exonic hg19 LGG TCGA-E1-5303 3 7 Out-of-frame Inter-chr q21.31 p36.23 32562 ChimerSeq STARFusion TCGA_RNA-Seq MYBPC1-PXN MYBPC1 chr12 102057338 + PXN chr12 120662180 - Exonic hg19 LGG TCGA-E1-5303 2 8 In-Frame Intra-chr q23.2 q24.23 Seq+ 32563 ChimerSeq STARFusion TCGA_RNA-Seq ACACA-WASIR2 ACACA chr17 35468466 - WASIR2 chr16 72958 + Exonic hg19 LGG TCGA-DB-A64Q 13 35 Out-of-frame Inter-chr p13.3 Seq+ 32564 ChimerSeq STARFusion TCGA_RNA-Seq PDXDC1-BFAR PDXDC1 chr16 15123913 + BFAR chr16 14755749 + Exonic hg19 LGG TCGA-DB-A64Q 2 13 Out-of-frame Intra-chr p13.11 Seq+ 32565 ChimerSeq STARFusion TCGA_RNA-Seq KRT8P1-GFAP KRT8P1 chr14 39197438 + GFAP chr17 42988025 - Exonic hg19 LGG TCGA-DB-A64V 4 3 Out-of-frame Inter-chr q21.1 q21.31 32566 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 LGG TCGA-DB-A64W 3 5 CDS-5'UTR Intra-chr q23 Seq+ 32567 ChimerSeq STARFusion TCGA_RNA-Seq C19orf24-PALM C19orf24 chr19 1275829 + PALM chr19 726138 + Exonic hg19 LGG TCGA-DB-A64U 2 22 In-Frame Intra-chr p13.3 p13.3 Seq+ 32568 ChimerSeq STARFusion TCGA_RNA-Seq CNBP-ALDH1L1 CNBP chr3 128902619 - ALDH1L1 chr3 125831723 - Exonic hg19 LGG TCGA-HT-7858 5 40 5'UTR-CDS Intra-chr q21.3 q21.3 Seq+ 32569 ChimerSeq STARFusion TCGA_RNA-Seq VPS9D1-ZNF827 VPS9D1 chr16 89787171 - ZNF827 chr4 146700663 - Exonic hg19 LGG TCGA-HT-7857 5 12 Out-of-frame Inter-chr q24.3 q31.22 Transcription factor Seq+ 32570 ChimerSeq STARFusion TCGA_RNA-Seq MAP9-TAT MAP9 chr4 156281320 - TAT chr16 71610330 - Exonic hg19 LGG TCGA-HT-7857 3 8 CDS-5'UTR Inter-chr q32.1 q22.2 Tumor suppressor gene Seq+ 32571 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-GATA4 NCOR2 chr12 124862783 - GATA4 chr8 11606428 + Exonic hg19 LGG TCGA-HT-7854 186 934 In-Frame Inter-chr q24.31 p23.1 Tumor suppressor gene Transcription factor Seq+ 32572 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-GATA4 NCOR2 chr12 124862783 - GATA4 chr8 11606425 + Exonic hg19 LGG TCGA-HT-7854 70 916 Out-of-frame Inter-chr q24.31 p23.1 Tumor suppressor gene Transcription factor Seq+ 32573 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-TMEM222 WASF2 chr1 27816497 - TMEM222 chr1 27657211 + Exonic hg19 LGG TCGA-DB-A64O 2 41 5'UTR-5'UTR Intra-chr p36.11 p36.11 Seq+ 32574 ChimerSeq STARFusion TCGA_RNA-Seq KDM5C-MAGT1 KDM5C chrX 53222619 - MAGT1 chrX 77086392 - Exonic hg19 LGG TCGA-VV-A86M 3 3 Out-of-frame Intra-chr p11.22 Oncogene q21.1 Seq+ 32575 ChimerSeq STARFusion TCGA_RNA-Seq TCF7L2-VTI1A TCF7L2 chr10 114905856 + VTI1A chr10 114575049 + Exonic hg19 LIHC TCGA-DD-A1EB-01A 13 33 In-Frame Intra-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q25.2 Seq+ 32576 ChimerSeq STARFusion TCGA_RNA-Seq TTC28-PITPNB TTC28 chr22 29025540 - PITPNB chr22 28269803 - Exonic hg19 LIHC TCGA-DD-A1EB-01A 16 16 In-Frame Intra-chr q12.1 q12.1 Seq+ 32577 ChimerSeq STARFusion TCGA_RNA-Seq PPP3CB-VMP1 PPP3CB chr10 75227311 - VMP1 chr17 57808782 + Exonic hg19 LIHC TCGA-DD-A1EB-01A 4 40 CDS-5'UTR Inter-chr q22.2 q23.1 Seq+ 32578 ChimerSeq STARFusion TCGA_RNA-Seq IP6K1-MON1A IP6K1 chr3 49823787 - MON1A chr3 49950792 - Exonic hg19 LIHC TCGA-DD-A1EB-01A 3 20 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 32579 ChimerSeq STARFusion TCGA_RNA-Seq PLXNB1-SLC26A6 PLXNB1 chr3 48460986 - SLC26A6 chr3 48667144 - Exonic hg19 LIHC TCGA-DD-A1EB-01A 3 17 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 32580 ChimerSeq STARFusion TCGA_RNA-Seq VAMP1-CHD4 VAMP1 chr12 6574056 - CHD4 chr12 6711663 - Exonic hg19 LIHC TCGA-DD-A1EB-01A 2 13 In-Frame Intra-chr p13.31 p13.31 Seq+ 32581 ChimerSeq STARFusion TCGA_RNA-Seq ZNF385B-CWC22 ZNF385B chr2 180725828 - CWC22 chr2 180858181 - Exonic hg19 LIHC TCGA-DD-A1EB-01A 4 2 5'UTR-5'UTR Intra-chr q31.3 Transcription factor q31.3 Seq+ 32582 ChimerSeq STARFusion TCGA_RNA-Seq APPBP2-PLXNA2 APPBP2 chr17 58556509 - PLXNA2 chr1 208315808 - Exonic hg19 LIHC TCGA-DD-A1EB-01A 2 1 Out-of-frame Inter-chr q23.2 q32.2 32583 ChimerSeq STARFusion TCGA_RNA-Seq LRRC61-DOCK4 LRRC61 chr7 150023099 + DOCK4 chr7 111629218 - Exonic hg19 LIHC TCGA-NI-A8LF-01A 3 2 5'UTR-CDS Intra-chr q36.1 q31.1 Seq+ 32584 ChimerSeq STARFusion TCGA_RNA-Seq AKAP13-PDE8A AKAP13 chr15 85924029 + PDE8A chr15 85607601 + Exonic hg19 LIHC TCGA-NI-A8LF-01A 2 4 5'UTR-5'UTR Intra-chr q25.3 q25.3 Pub 32585 ChimerSeq STARFusion TCGA_RNA-Seq SH3GL1-DPP9 SH3GL1 chr19 4400321 - DPP9 chr19 4679958 - Exonic hg19 LIHC TCGA-NI-A8LF-01A 2 3 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 32586 ChimerSeq STARFusion TCGA_RNA-Seq DEPDC1B-PDE4D DEPDC1B chr5 59982789 - PDE4D chr5 59284544 - Exonic hg19 LIHC TCGA-CC-A5UC-01A 3 5 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 32587 ChimerSeq STARFusion TCGA_RNA-Seq SLC30A10-MEX3A SLC30A10 chr1 220100370 - MEX3A chr1 156047473 - Exonic hg19 LIHC TCGA-CC-A1HT-01A 3 2 In-Frame Intra-chr q41 q22 Seq+ 32588 ChimerSeq STARFusion TCGA_RNA-Seq LRBA-SH3D19 LRBA chr4 151935579 - SH3D19 chr4 152070713 - Exonic hg19 LIHC TCGA-CC-A1HT-01A 2 1 In-Frame Intra-chr q31.3 q31.3 KB Seq+ 32589 ChimerSeq STARFusion TCGA_RNA-Seq HGD-RABL3 HGD chr3 120371439 - RABL3 chr3 120413071 - Exonic hg19 LIHC TCGA-BC-A10Z-01A 110 276 In-Frame Intra-chr q13.33 q13.33 Seq+ 32590 ChimerSeq STARFusion TCGA_RNA-Seq TTC38-LOC730668 TTC38 chr22 46679929 + LOC730668 chr22 46405601 + Exonic hg19 LIHC TCGA-BC-A10Z-01A 20 96 CDS-5'UTR Intra-chr q13.31 32591 ChimerSeq STARFusion TCGA_RNA-Seq EPS15L1-CALR3 EPS15L1 chr19 16582724 - CALR3 chr19 16594926 - Exonic hg19 LIHC TCGA-BC-A10Z-01A 21 24 In-Frame Intra-chr p13.11 p13.11 Seq+ 32592 ChimerSeq STARFusion TCGA_RNA-Seq DPM3-KRTCAP2 DPM3 chr1 155112967 - KRTCAP2 chr1 155142333 - Exonic hg19 LIHC TCGA-BC-A10Z-01A 20 4 5'UTR-CDS Intra-chr q22 q22 32593 ChimerSeq STARFusion TCGA_RNA-Seq EPS15L1-CALR3 EPS15L1 chr19 16582724 - CALR3 chr19 16596068 - Exonic hg19 LIHC TCGA-BC-A10Z-01A 11 24 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 32594 ChimerSeq STARFusion TCGA_RNA-Seq COMMD9-CYP19A1 COMMD9 chr11 36310912 - CYP19A1 chr15 51535147 - Exonic hg19 LIHC TCGA-BC-A10Z-01A 9 10 CDS-5'UTR Inter-chr p13 q21.2 Seq+ 32595 ChimerSeq STARFusion TCGA_RNA-Seq EPS15L1-CALR3 EPS15L1 chr19 16582724 - CALR3 chr19 16593596 - Exonic hg19 LIHC TCGA-BC-A10Z-01A 3 24 In-Frame Intra-chr p13.11 p13.11 Seq+ 32596 ChimerSeq STARFusion TCGA_RNA-Seq INTS4-KCTD14 INTS4 chr11 77702154 - KCTD14 chr11 77728316 - Exonic hg19 LIHC TCGA-BC-A10Z-01A 5 10 In-Frame Intra-chr q14.1 q14.1 Seq+ 32597 ChimerSeq STARFusion TCGA_RNA-Seq EEA1-LOC256021 EEA1 chr12 93322819 - LOC256021 chr12 92382969 - Exonic hg19 LIHC TCGA-BC-A10Z-01A 2 21 Out-of-frame Intra-chr q22 Transcription factor 32598 ChimerSeq STARFusion TCGA_RNA-Seq COMMD9-CDKL2 COMMD9 chr11 36310912 - CDKL2 chr4 76507108 - Exonic hg19 LIHC TCGA-BC-A10Z-01A 5 6 In-Frame Inter-chr p13 q21.1 CMGC:CDKL Seq+ 32599 ChimerSeq STARFusion TCGA_RNA-Seq UBE2N-LOC643339 UBE2N chr12 93835631 - LOC643339 chr12 93609455 - Exonic hg19 LIHC TCGA-BC-A10Z-01A 4 10 CDS-3'UTR Intra-chr q22 32600 ChimerSeq STARFusion TCGA_RNA-Seq SNX4-ZNF148 SNX4 chr3 125238876 - ZNF148 chr3 124953173 - Exonic hg19 LIHC TCGA-BC-A10Z-01A 4 7 Out-of-frame Intra-chr q21.2 q21.2 Transcription factor 32601 ChimerSeq STARFusion TCGA_RNA-Seq APOH-BOLA3 APOH chr17 64219816 - BOLA3 chr2 74362785 - Exonic hg19 LIHC TCGA-BC-A10Z-01A 2 5 In-Frame Inter-chr q24.2 p13.1 32602 ChimerSeq STARFusion TCGA_RNA-Seq PCGF2-RBP4 PCGF2 chr17 36891718 - RBP4 chr10 95360559 - Exonic hg19 LIHC TCGA-BC-A10Z-01A 3 1 Out-of-frame Inter-chr Tumor suppressor gene Transcription factor q23.33 32603 ChimerSeq STARFusion TCGA_RNA-Seq EEF2K-VWA3A EEF2K chr16 22237296 + VWA3A chr16 22157557 + Exonic hg19 LIHC TCGA-G3-AAV1-01A 3 16 In-Frame Intra-chr p12.2 Seq+ 32604 ChimerSeq STARFusion TCGA_RNA-Seq CAMKK2-HPD CAMKK2 chr12 121734441 - HPD chr12 122277954 - Exonic hg19 LIHC TCGA-FV-A495-01A 6 39 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 32605 ChimerSeq STARFusion TCGA_RNA-Seq DAPK2-FAM96A DAPK2 chr15 64332369 - FAM96A chr15 64381050 - Exonic hg19 LIHC TCGA-FV-A495-01A 5 17 Out-of-frame Intra-chr q22.31 CAMK:DAPK Tumor suppressor gene q22.31 Seq+ 32606 ChimerSeq STARFusion TCGA_RNA-Seq SHH-KNG1 SHH chr7 155595728 - KNG1 chr3 186459311 + Exonic hg19 LIHC TCGA-FV-A495-01A 4 14 In-Frame Inter-chr q36.3 q27.3 Seq+ 32607 ChimerSeq STARFusion TCGA_RNA-Seq DAPK2-FAM96A DAPK2 chr15 64332369 - FAM96A chr15 64373350 - Exonic hg19 LIHC TCGA-FV-A495-01A 2 17 Out-of-frame Intra-chr q22.31 CAMK:DAPK Tumor suppressor gene q22.31 Seq+ 32608 ChimerSeq STARFusion TCGA_RNA-Seq C16orf45-SMPDL3B C16orf45 chr16 15528616 + SMPDL3B chr1 28284987 + Exonic hg19 LIHC TCGA-FV-A495-01A 3 11 Out-of-frame Inter-chr p35.3 Seq+ 32609 ChimerSeq STARFusion TCGA_RNA-Seq MASP2-EXOSC10 MASP2 chr1 11090233 - EXOSC10 chr1 11137708 - Exonic hg19 LIHC TCGA-FV-A495-01A 3 4 Out-of-frame Intra-chr p36.22 p36.22 Seq+ 32610 ChimerSeq STARFusion TCGA_RNA-Seq NUCB1-APOE NUCB1 chr19 49409142 + APOE chr19 45411017 + Exonic hg19 LIHC TCGA-UB-A7MF-01A 2 3 In-Frame Intra-chr q13.33 q13.32 32611 ChimerSeq STARFusion TCGA_RNA-Seq FAM172A-MCTP1 FAM172A chr5 93386436 - MCTP1 chr5 94353188 - Exonic hg19 LIHC TCGA-ED-A82E-01A 7 32 In-Frame Intra-chr q15 Tumor suppressor gene q15 Seq+ 32612 ChimerSeq STARFusion TCGA_RNA-Seq FGD4-CD4 FGD4 chr12 32764217 + CD4 chr12 6925222 + Exonic hg19 LIHC TCGA-ED-A82E-01A 9 10 Out-of-frame Intra-chr p11.21 p13.31 Tumor suppressor gene Seq+ 32613 ChimerSeq STARFusion TCGA_RNA-Seq SLC38A1-UNKL SLC38A1 chr12 46622936 - UNKL chr16 1453345 - Exonic hg19 LIHC TCGA-ED-A82E-01A 6 16 In-Frame Inter-chr q13.11 p13.3 Seq+ 32614 ChimerSeq STARFusion TCGA_RNA-Seq GPR110-TNFRSF21 GPR110 chr6 46976681 - TNFRSF21 chr6 47221257 - Exonic hg19 LIHC TCGA-ED-A82E-01A 3 12 Out-of-frame Intra-chr p12.3 Seq+ 32615 ChimerSeq STARFusion TCGA_RNA-Seq ELK3-DDIT4L ELK3 chr12 96617551 + DDIT4L chr4 101111189 - Exonic hg19 LIHC TCGA-ED-A82E-01A 2 5 CDS-5'UTR Inter-chr q23.1 Transcription factor q24 Seq+ 32616 ChimerSeq STARFusion TCGA_RNA-Seq UNKL-DIP2B UNKL chr16 1463847 - DIP2B chr12 51019759 + Exonic hg19 LIHC TCGA-ED-A82E-01A 2 4 Out-of-frame Inter-chr p13.3 q13.12 Seq+ 32617 ChimerSeq STARFusion TCGA_RNA-Seq POLR2F-EIF3L POLR2F chr22 38363177 + EIF3L chr22 38251572 + Exonic hg19 LIHC TCGA-ED-A82E-01A 2 0 In-Frame Intra-chr q13.1 q13.1 Seq+ 32618 ChimerSeq STARFusion TCGA_RNA-Seq NXF1-STX5 NXF1 chr11 62566011 - STX5 chr11 62575100 - Exonic hg19 LIHC TCGA-DD-A3A1-01A 27 126 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 32619 ChimerSeq STARFusion TCGA_RNA-Seq TNIP1-ANXA6 TNIP1 chr5 150466646 - ANXA6 chr5 150503928 - Exonic hg19 LIHC TCGA-DD-A3A1-01A 3 7 5'UTR-CDS Intra-chr q33.1 q33.1 Seq+ 32620 ChimerSeq STARFusion TCGA_RNA-Seq ALB-EFR3A ALB chr4 74275206 + EFR3A chr8 132966119 + Exonic hg19 LIHC TCGA-K7-A5RF-01A 10 1 Out-of-frame Inter-chr q13.3 q24.22 32621 ChimerSeq STARFusion TCGA_RNA-Seq VWA9-SERPINA1 VWA9 chr15 65903575 - SERPINA1 chr14 94844974 - Exonic hg19 LIHC TCGA-DD-A4NP-01A 5 1 Out-of-frame Inter-chr q32.13 32622 ChimerSeq STARFusion TCGA_RNA-Seq FGA-ECI2 FGA chr4 155507147 - ECI2 chr6 4130676 - Exonic hg19 LIHC TCGA-DD-A4NP-01A 3 2 Out-of-frame Inter-chr q31.3 p25.2 32623 ChimerSeq STARFusion TCGA_RNA-Seq FGB-TF FGB chr4 155490459 + TF chr3 133497430 + Exonic hg19 LIHC TCGA-DD-A4NP-01A 2 6 In-Frame Inter-chr q31.3 q22.1 32624 ChimerSeq STARFusion TCGA_RNA-Seq ORM1-HPX ORM1 chr9 117088627 + HPX chr11 6461741 - Exonic hg19 LIHC TCGA-DD-A4NP-01A 3 1 Out-of-frame Inter-chr q32 p15.4 32625 ChimerSeq STARFusion TCGA_RNA-Seq SERPING1-A1BG SERPING1 chr11 57369642 + A1BG chr19 58859006 - Exonic hg19 LIHC TCGA-DD-A4NP-01A 2 2 In-Frame Inter-chr q12.1 q13.43 32626 ChimerSeq STARFusion TCGA_RNA-Seq HPX-APOC3 HPX chr11 6461395 - APOC3 chr11 116703480 + Exonic hg19 LIHC TCGA-DD-A4NP-01A 2 1 Out-of-frame Intra-chr p15.4 q23.3 32627 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC17-ZFYVE19 DNAJC17 chr15 41071421 - ZFYVE19 chr15 41105536 + Exonic hg19 LIHC TCGA-G3-A25T-01A 12 95 In-Frame Intra-chr q15.1 q15.1 Seq+ 32628 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC17-ZFYVE19 DNAJC17 chr15 41071421 - ZFYVE19 chr15 41104897 + Exonic hg19 LIHC TCGA-G3-A25T-01A 8 95 In-Frame Intra-chr q15.1 q15.1 Seq+ 32629 ChimerSeq STARFusion TCGA_RNA-Seq ANXA8L2-LINC00842 ANXA8L2 chr10 47747132 + LINC00842 chr10 47099714 - Exonic hg19 LIHC TCGA-G3-A25T-01A 2 1 Out-of-frame Intra-chr 32630 ChimerSeq STARFusion TCGA_RNA-Seq YEATS4-LYZ YEATS4 chr12 69764755 + LYZ chr12 69743888 + Exonic hg19 LIHC TCGA-BC-A3KF-01A 15 54 In-Frame Intra-chr q15 q15 Seq+ 32631 ChimerSeq STARFusion TCGA_RNA-Seq AFM-ALB AFM chr4 74347580 + ALB chr4 74285971 + Exonic hg19 LIHC TCGA-BC-A3KF-01A 3 26 Out-of-frame Intra-chr q13.3 q13.3 32632 ChimerSeq STARFusion TCGA_RNA-Seq TFR2-NCOR2 TFR2 chr7 100224386 - NCOR2 chr12 124848345 - Exonic hg19 LIHC TCGA-BC-A3KF-01A 6 13 Out-of-frame Inter-chr q22.1 q24.31 Seq+ 32633 ChimerSeq STARFusion TCGA_RNA-Seq AFM-ALB AFM chr4 74350107 + ALB chr4 74283805 + Exonic hg19 LIHC TCGA-BC-A3KF-01A 2 26 In-Frame Intra-chr q13.3 q13.3 32634 ChimerSeq STARFusion TCGA_RNA-Seq MTMR3-TCN2 MTMR3 chr22 30279348 + TCN2 chr22 31006858 + Exonic hg19 LIHC TCGA-BC-A3KF-01A 2 4 5'UTR-CDS Intra-chr q12.2 q12.2 32635 ChimerSeq STARFusion TCGA_RNA-Seq NCOR1-ZNF595 NCOR1 chr17 16118676 - ZNF595 chr4 59323 + Exonic hg19 LIHC TCGA-BC-A3KF-01A 2 4 5'UTR-CDS Inter-chr p11.2 Oncogene p16.3 Transcription factor Seq+ 32636 ChimerSeq STARFusion TCGA_RNA-Seq NCOR1-ZNF718 NCOR1 chr17 16118676 - ZNF718 chr4 59323 + Exonic hg19 LIHC TCGA-BC-A3KF-01A 2 4 5'UTR-CDS Inter-chr p11.2 Oncogene p16.3 Transcription factor 32637 ChimerSeq STARFusion TCGA_RNA-Seq CLYBL-PCCA CLYBL chr13 100511303 + PCCA chr13 101077887 + Exonic hg19 LIHC TCGA-BC-A3KF-01A 2 2 In-Frame Intra-chr q32.3 q32.3 32638 ChimerSeq STARFusion TCGA_RNA-Seq IRF2-ENPP6 IRF2 chr4 185395533 - ENPP6 chr4 185033962 - Exonic hg19 LIHC TCGA-BW-A5NP-01A 21 154 5'UTR-CDS Intra-chr q35.1 Transcription factor q35.1 Seq+ 32639 ChimerSeq STARFusion TCGA_RNA-Seq ZNF252P-TSHZ2 ZNF252P chr8 146219865 - TSHZ2 chr20 52103683 + Exonic hg19 LIHC TCGA-BW-A5NP-01A 6 32 3'UTR-3'UTR Inter-chr q24.3 q13.2 Transcription factor Seq+ 32640 ChimerSeq STARFusion TCGA_RNA-Seq POLD2-GCK POLD2 chr7 44163110 - GCK chr7 44193062 - Exonic hg19 LIHC TCGA-XR-A8TF-01A 5 1 Out-of-frame Intra-chr p13 p13 STE:STE20 Seq+ 32641 ChimerSeq STARFusion TCGA_RNA-Seq TNFRSF10D-LOC286059 TNFRSF10D chr8 22995155 - LOC286059 chr8 22939120 + Exonic hg19 LIHC TCGA-ZP-A9CV-01A 4 10 Out-of-frame Intra-chr p21.3 32642 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB1-PRKACA DNAJB1 chr19 14628951 - PRKACA chr19 14218221 - Exonic hg19 LIHC TCGA-RC-A6M5-01A 143 683 In-Frame Intra-chr p13.12 Tumor suppressor gene p13.12 KB Pub Seq+ 32643 ChimerSeq STARFusion TCGA_RNA-Seq ENPP1-CDX1 ENPP1 chr6 132181646 + CDX1 chr5 149562331 + Exonic hg19 LIHC TCGA-RC-A6M5-01A 27 94 Out-of-frame Inter-chr q23.2 q32 Transcription factor Seq+ 32644 ChimerSeq STARFusion TCGA_RNA-Seq PSPC1-METTL21C PSPC1 chr13 20356526 - METTL21C chr13 103339407 - Exonic hg19 LIHC TCGA-GJ-A9DB-01A 17 65 In-Frame Intra-chr q12.11 q33.1 Seq+ 32645 ChimerSeq STARFusion TCGA_RNA-Seq PSPC1-METTL21C PSPC1 chr13 20356526 - METTL21C chr13 103338775 - Exonic hg19 LIHC TCGA-GJ-A9DB-01A 2 65 Out-of-frame Intra-chr q12.11 q33.1 Seq+ 32646 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R5E-MBIP PPP2R5E chr14 64006247 - MBIP chr14 36784121 - Exonic hg19 LIHC TCGA-GJ-A9DB-01A 2 2 Out-of-frame Intra-chr q23.2 q13.3 Seq+ 32647 ChimerSeq STARFusion TCGA_RNA-Seq CYP2E1-AMACR CYP2E1 chr10 135342144 + AMACR chr5 34006004 - Exonic hg19 LIHC TCGA-DD-A39W-01A 3 54 In-Frame Inter-chr q26.3 p13.2 32648 ChimerSeq STARFusion TCGA_RNA-Seq DPYD-RGS5 DPYD chr1 98348820 - RGS5 chr1 163138158 - Exonic hg19 LIHC TCGA-ED-A97K-01A 3 10 Out-of-frame Intra-chr p21.3 Oncogene q23.3 Seq+ 32649 ChimerSeq STARFusion TCGA_RNA-Seq HID1-DNAH17 HID1 chr17 72968686 - DNAH17 chr17 76506588 - Exonic hg19 LIHC TCGA-ED-A97K-01A 2 5 Out-of-frame Intra-chr q25.1 q25.3 Seq+ 32650 ChimerSeq STARFusion TCGA_RNA-Seq SPOP-CA10 SPOP chr17 47755295 - CA10 chr17 50008492 - Exonic hg19 LIHC TCGA-ED-A97K-01A 2 3 5'UTR-CDS Intra-chr q21.33 Oncogene Tumor suppressor gene q22 Seq+ 32651 ChimerSeq STARFusion TCGA_RNA-Seq CDK13-C7orf10 CDK13 chr7 40041630 + C7orf10 chr7 40277234 + Exonic hg19 LIHC TCGA-G3-A7M5-01A 3 3 In-Frame Intra-chr p14.1 Seq+ 32652 ChimerSeq STARFusion TCGA_RNA-Seq EP300-RBX1 EP300 chr22 41551117 + RBX1 chr22 41363803 + Exonic hg19 LIHC TCGA-DD-A73F-01A 16 197 In-Frame Intra-chr q13.2 Oncogene q13.2 Seq+ 32653 ChimerSeq STARFusion TCGA_RNA-Seq EP300-RBX1 EP300 chr22 41551117 + RBX1 chr22 41368480 + Exonic hg19 LIHC TCGA-DD-A73F-01A 2 197 Out-of-frame Intra-chr q13.2 Oncogene q13.2 Seq+ 32654 ChimerSeq STARFusion TCGA_RNA-Seq PXK-FLNB PXK chr3 58318817 + FLNB chr3 58145281 + Exonic hg19 LIHC TCGA-DD-A73F-01A 17 77 In-Frame Intra-chr p14.3 p14.3 Seq+ 32655 ChimerSeq STARFusion TCGA_RNA-Seq CEBPG-GPATCH1 CEBPG chr19 33864801 + GPATCH1 chr19 33617494 + Exonic hg19 LIHC TCGA-DD-A73F-01A 15 50 5'UTR-CDS Intra-chr q13.11 Transcription factor q13.11 Seq+ 32656 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-TXNDC11 GNB1 chr1 1822259 - TXNDC11 chr16 11778101 - Exonic hg19 LIHC TCGA-DD-A73F-01A 12 15 5'UTR-CDS Inter-chr p36.33 p13.13 Seq+ 32657 ChimerSeq STARFusion TCGA_RNA-Seq PRRG4-CROT PRRG4 chr11 32861785 + CROT chr7 87027840 + Exonic hg19 LIHC TCGA-DD-A73F-01A 5 43 In-Frame Inter-chr p13 q21.12 Seq+ 32658 ChimerSeq STARFusion TCGA_RNA-Seq ZAK-RAPGEF4 ZAK chr2 174062840 + RAPGEF4 chr2 173879205 + Exonic hg19 LIHC TCGA-DD-A73F-01A 9 26 Out-of-frame Intra-chr TKL:MLK q31.1 32659 ChimerSeq STARFusion TCGA_RNA-Seq TCF7L2-VTI1A TCF7L2 chr10 114799885 + VTI1A chr10 114575049 + Exonic hg19 LIHC TCGA-DD-A73F-01A 9 20 Out-of-frame Intra-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q25.2 Seq+ 32660 ChimerSeq STARFusion TCGA_RNA-Seq EMP2-TVP23A EMP2 chr16 10674406 - TVP23A chr16 10868953 - Exonic hg19 LIHC TCGA-DD-A73F-01A 8 13 Out-of-frame Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 32661 ChimerSeq STARFusion TCGA_RNA-Seq CLASRP-TMEM217 CLASRP chr19 45563885 + TMEM217 chr6 37186817 - Exonic hg19 LIHC TCGA-DD-A73F-01A 4 17 CDS-5'UTR Inter-chr q13.32 p21.2 Seq+ 32662 ChimerSeq STARFusion TCGA_RNA-Seq SMAD7-DYM SMAD7 chr18 46468851 - DYM chr18 46645296 - Exonic hg19 LIHC TCGA-DD-A73F-01A 3 13 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 32663 ChimerSeq STARFusion TCGA_RNA-Seq EMP2-TVP23A EMP2 chr16 10674406 - TVP23A chr16 10867985 - Exonic hg19 LIHC TCGA-DD-A73F-01A 2 13 Out-of-frame Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 32664 ChimerSeq STARFusion TCGA_RNA-Seq GPHN-MPP5 GPHN chr14 66975309 + MPP5 chr14 67736418 + Exonic hg19 LIHC TCGA-DD-A73F-01A 3 6 CDS-5'UTR Intra-chr q23.3 q23.3 32665 ChimerSeq STARFusion TCGA_RNA-Seq TMEM110-RFT1 TMEM110 chr3 52931307 - RFT1 chr3 53157856 - Exonic hg19 LIHC TCGA-DD-A73F-01A 3 3 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 32666 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD27-FAM3C ANKRD27 chr19 33149820 - FAM3C chr7 121000181 - Exonic hg19 LIHC TCGA-DD-A73F-01A 2 1 Out-of-frame Inter-chr q13.11 q31.31 32667 ChimerSeq STARFusion TCGA_RNA-Seq SMURF1-KPNA7 SMURF1 chr7 98741349 - KPNA7 chr7 98790724 - Exonic hg19 LIHC TCGA-ZS-A9CG-01A 9 20 In-Frame Intra-chr Seq+ 32668 ChimerSeq STARFusion TCGA_RNA-Seq GLUL-FTCD GLUL chr1 182360814 - FTCD chr21 47558837 - Exonic hg19 LIHC TCGA-ZS-A9CG-01A 2 3 5'UTR-CDS Inter-chr q25.3 32669 ChimerSeq STARFusion TCGA_RNA-Seq GPC5-MIR4500HG GPC5 chr13 92797242 + MIR4500HG chr13 88099488 - Exonic hg19 LIHC TCGA-CC-A8HU-01A 2 6 CDS-3'UTR Intra-chr q31.3 Tumor suppressor gene q31.2 Seq+ 32670 ChimerSeq STARFusion TCGA_RNA-Seq GPC5-MIR4500HG GPC5 chr13 92797242 + MIR4500HG chr13 88113224 - Exonic hg19 LIHC TCGA-CC-A8HU-01A 2 6 CDS-3'UTR Intra-chr q31.3 Tumor suppressor gene q31.2 Seq+ 32671 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-GLUL INTS1 chr7 1511915 - GLUL chr1 182355020 - Exonic hg19 LIHC TCGA-DD-A1EE-01A 9 1 Out-of-frame Inter-chr p22.3 q25.3 32672 ChimerSeq STARFusion TCGA_RNA-Seq HDAC4-THAP4 HDAC4 chr2 240274373 - THAP4 chr2 242545888 - Exonic hg19 LIHC TCGA-CC-A3MA-01A 38 125 In-Frame Intra-chr q37.3 q37.3 Transcription factor Seq+ 32673 ChimerSeq STARFusion TCGA_RNA-Seq RNF115-FAM72D RNF115 chr1 145650540 + FAM72D chr1 143897641 - Exonic hg19 LIHC TCGA-CC-A3MA-01A 6 10 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 32674 ChimerSeq STARFusion TCGA_RNA-Seq ENTPD5-MICU1 ENTPD5 chr14 74436713 - MICU1 chr10 74311099 - Exonic hg19 LIHC TCGA-DD-A4NN-01A 28 113 In-Frame Inter-chr q24.3 q22.1 Seq+ 32675 ChimerSeq STARFusion TCGA_RNA-Seq PC-CAT PC chr11 66631245 - CAT chr11 34470739 + Exonic hg19 LIHC TCGA-DD-A4NN-01A 8 47 In-Frame Intra-chr q13.2 p13 Tumor suppressor gene Seq+ 32676 ChimerSeq STARFusion TCGA_RNA-Seq AASDHPPT-ABTB2 AASDHPPT chr11 105950419 + ABTB2 chr11 34226237 - Exonic hg19 LIHC TCGA-DD-A4NN-01A 2 7 In-Frame Intra-chr q22.3 p13 Seq+ 32677 ChimerSeq STARFusion TCGA_RNA-Seq XRCC5-ABCB1 XRCC5 chr2 216997110 + ABCB1 chr7 87133765 - Exonic hg19 LIHC TCGA-BC-A10T-01A 111 739 In-Frame Inter-chr q35 Tumor suppressor gene q21.12 Seq+ 32678 ChimerSeq STARFusion TCGA_RNA-Seq XRCC5-ABCB4 XRCC5 chr2 216997110 + ABCB4 chr7 87031618 - Exonic hg19 LIHC TCGA-BC-A10T-01A 124 85 In-Frame Inter-chr q35 Tumor suppressor gene q21.12 32679 ChimerSeq STARFusion TCGA_RNA-Seq ABCC2-SMIM4 ABCC2 chr10 101569975 + SMIM4 chr3 52574440 + Exonic hg19 LIHC TCGA-BC-A10T-01A 70 287 Out-of-frame Inter-chr q24.2 p21.1 Seq+ 32680 ChimerSeq STARFusion TCGA_RNA-Seq PC-ACTN4 PC chr11 66631245 - ACTN4 chr19 39191240 + Exonic hg19 LIHC TCGA-BC-A10T-01A 46 146 In-Frame Inter-chr q13.2 Seq+ 32681 ChimerSeq STARFusion TCGA_RNA-Seq SPAG9-TEKT1 SPAG9 chr17 49059887 - TEKT1 chr17 6704264 - Exonic hg19 LIHC TCGA-BC-A10T-01A 28 79 Out-of-frame Intra-chr q21.33 p13.1 Seq+ 32682 ChimerSeq STARFusion TCGA_RNA-Seq RAD50-C5orf56 RAD50 chr5 131895059 + C5orf56 chr5 131785342 + Exonic hg19 LIHC TCGA-BC-A10T-01A 12 49 CDS-5'UTR Intra-chr q31.1 Oncogene q31.1 Seq+ 32683 ChimerSeq STARFusion TCGA_RNA-Seq MCC-DBN1 MCC chr5 112630026 - DBN1 chr5 176887704 - Exonic hg19 LIHC TCGA-BC-A10T-01A 14 35 In-Frame Intra-chr q22.2 Tumor suppressor gene q35.3 Seq+ 32684 ChimerSeq STARFusion TCGA_RNA-Seq AMBP-RAE1 AMBP chr9 116835205 - RAE1 chr20 55948531 + Exonic hg19 LIHC TCGA-BC-A10T-01A 11 43 Out-of-frame Inter-chr q32 q13.31 Seq+ 32685 ChimerSeq STARFusion TCGA_RNA-Seq NFIX-RAD23A NFIX chr19 13106678 + RAD23A chr19 13063503 + Exonic hg19 LIHC TCGA-BC-A10T-01A 13 25 In-Frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 32686 ChimerSeq STARFusion TCGA_RNA-Seq ABCB4-TMEM169 ABCB4 chr7 87076350 - TMEM169 chr2 216946870 + Exonic hg19 LIHC TCGA-BC-A10T-01A 7 32 CDS-5'UTR Inter-chr q21.12 q35 Seq+ 32687 ChimerSeq STARFusion TCGA_RNA-Seq AMBP-RAE1 AMBP chr9 116835205 - RAE1 chr20 55948556 + Exonic hg19 LIHC TCGA-BC-A10T-01A 4 43 Out-of-frame Inter-chr q32 q13.31 Seq+ 32688 ChimerSeq STARFusion TCGA_RNA-Seq DAZAP1-C19orf24 DAZAP1 chr19 1428994 + C19orf24 chr19 1277182 + Exonic hg19 LIHC TCGA-BC-A10T-01A 6 35 Out-of-frame Intra-chr p13.3 p13.3 32689 ChimerSeq STARFusion TCGA_RNA-Seq MCC-DBN1 MCC chr5 112630026 - DBN1 chr5 176887556 - Exonic hg19 LIHC TCGA-BC-A10T-01A 2 35 In-Frame Intra-chr q22.2 Tumor suppressor gene q35.3 Seq+ 32690 ChimerSeq STARFusion TCGA_RNA-Seq ABCB4-TMEM169 ABCB4 chr7 87076350 - TMEM169 chr2 216960561 + Exonic hg19 LIHC TCGA-BC-A10T-01A 2 32 CDS-5'UTR Inter-chr q21.12 q35 Seq+ 32691 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A14-FAM110B SLC39A14 chr8 22237027 + FAM110B chr8 59058466 + Exonic hg19 LIHC TCGA-BC-A10T-01A 3 22 5'UTR-5'UTR Intra-chr p21.3 q12.1 Seq+ 32692 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A14-FAM110B SLC39A14 chr8 22224921 + FAM110B chr8 59058466 + Exonic hg19 LIHC TCGA-BC-A10T-01A 2 22 5'UTR-5'UTR Intra-chr p21.3 q12.1 Seq+ 32693 ChimerSeq STARFusion TCGA_RNA-Seq UGP2-MDH1 UGP2 chr2 64085070 + MDH1 chr2 63821622 + Exonic hg19 LIHC TCGA-BC-A10T-01A 6 6 In-Frame Intra-chr p15 p15 Seq+ 32694 ChimerSeq STARFusion TCGA_RNA-Seq AKR1C6P-TBC1D23 AKR1C6P chr10 4958385 - TBC1D23 chr3 100042431 + Exonic hg19 LIHC TCGA-BC-A10T-01A 4 12 Out-of-frame Inter-chr p15.1 q12.1 32695 ChimerSeq STARFusion TCGA_RNA-Seq HOGA1-UBTD1 HOGA1 chr10 99344671 + UBTD1 chr10 99329895 + Exonic hg19 LIHC TCGA-BC-A10T-01A 4 11 In-Frame Intra-chr q24.2 q24.1 Seq+ 32696 ChimerSeq STARFusion TCGA_RNA-Seq RALGAPA2-ACSM1 RALGAPA2 chr20 20610007 - ACSM1 chr16 20696725 - Exonic hg19 LIHC TCGA-BC-A10T-01A 4 10 In-Frame Inter-chr p11.23 p12.3 Seq+ 32697 ChimerSeq STARFusion TCGA_RNA-Seq FOXK2-GNG7 FOXK2 chr17 80521424 + GNG7 chr19 2520723 - Exonic hg19 LIHC TCGA-BC-A10T-01A 4 8 CDS-5'UTR Inter-chr q25.3 Transcription factor p13.3 Seq+ 32698 ChimerSeq STARFusion TCGA_RNA-Seq XPO5-EYS XPO5 chr6 43514308 - EYS chr6 64436573 - Exonic hg19 LIHC TCGA-BC-A10T-01A 4 7 Out-of-frame Intra-chr p21.1 Tumor suppressor gene q12 Seq+ 32699 ChimerSeq STARFusion TCGA_RNA-Seq FBXO17-LOC100130691 FBXO17 chr19 39466226 - LOC100130691 chr2 178203427 - Exonic hg19 LIHC TCGA-BC-A10T-01A 4 6 5'UTR-3'UTR Inter-chr 32700 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-POLR1C ZFAND3 chr6 37897775 + POLR1C chr6 43485044 + Exonic hg19 LIHC TCGA-BC-A10T-01A 2 8 Out-of-frame Intra-chr p21.2 p21.1 Seq+ 32701 ChimerSeq STARFusion TCGA_RNA-Seq SHROOM3-STBD1 SHROOM3 chr4 77476916 + STBD1 chr4 77230297 + Exonic hg19 LIHC TCGA-BC-A10T-01A 2 5 Out-of-frame Intra-chr q21.1 q21.1 32702 ChimerSeq STARFusion TCGA_RNA-Seq REPS2-TXLNG REPS2 chrX 17121902 + TXLNG chrX 16836697 + Exonic hg19 LIHC TCGA-BC-A10T-01A 2 4 In-Frame Intra-chr p22.2 p22.2 Seq+ 32703 ChimerSeq STARFusion TCGA_RNA-Seq CDC73-TROVE2 CDC73 chr1 193121574 + TROVE2 chr1 193060781 + Exonic hg19 LIHC TCGA-BC-A10T-01A 2 3 In-Frame Intra-chr q31.2 Oncogene Tumor suppressor gene q31.2 Seq+ 32704 ChimerSeq STARFusion TCGA_RNA-Seq LOH12CR1-CDR2L LOH12CR1 chr12 12514283 + CDR2L chr17 72995599 + Exonic hg19 LIHC TCGA-BC-A10T-01A 2 2 In-Frame Inter-chr q25.1 Seq+ 32705 ChimerSeq STARFusion TCGA_RNA-Seq SFMBT1-HPS3 SFMBT1 chr3 52966078 - HPS3 chr3 148877833 + Exonic hg19 LIHC TCGA-BC-A10T-01A 2 2 Out-of-frame Intra-chr p21.1 q24 Seq+ 32706 ChimerSeq STARFusion TCGA_RNA-Seq UBE2K-SMIM14 UBE2K chr4 39700010 + SMIM14 chr4 39606800 - Exonic hg19 LIHC TCGA-BC-A10T-01A 2 1 Out-of-frame Intra-chr p14 p14 32707 ChimerSeq STARFusion TCGA_RNA-Seq MED26-SLC16A1 MED26 chr19 16738683 - SLC16A1 chr1 113471974 - Exonic hg19 LIHC TCGA-BC-A10T-01A 2 0 CDS-5'UTR Inter-chr p13.11 32708 ChimerSeq STARFusion TCGA_RNA-Seq RNF152-PKD2L1 RNF152 chr18 59560028 - PKD2L1 chr10 102059475 - Exonic hg19 LIHC TCGA-BC-A10T-01A 2 0 5'UTR-CDS Inter-chr q21.33 q24.31 32709 ChimerSeq STARFusion TCGA_RNA-Seq SP1-ESPL1 SP1 chr12 53776159 + ESPL1 chr12 53684235 + Exonic hg19 LIHC TCGA-GJ-A6C0-01A 27 127 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 32710 ChimerSeq STARFusion TCGA_RNA-Seq AFP-ALB AFP chr4 74321007 + ALB chr4 74286809 + Exonic hg19 LIHC TCGA-GJ-A6C0-01A 14 48 5'UTR-3'UTR Intra-chr q13.3 q13.3 32711 ChimerSeq STARFusion TCGA_RNA-Seq ZAK-RAPGEF4 ZAK chr2 173955918 + RAPGEF4 chr2 173898642 + Exonic hg19 LIHC TCGA-GJ-A6C0-01A 7 37 In-Frame Intra-chr TKL:MLK q31.1 32712 ChimerSeq STARFusion TCGA_RNA-Seq TCF20-LOC100507412 TCF20 chr22 42605657 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LIHC TCGA-GJ-A6C0-01A 5 28 CDS-5'UTR Inter-chr Transcription factor 32713 ChimerSeq STARFusion TCGA_RNA-Seq USP8-CLPTM1L USP8 chr15 50793031 + CLPTM1L chr5 1326103 - Exonic hg19 LIHC TCGA-GJ-A6C0-01A 3 36 Out-of-frame Inter-chr q21.2 p15.33 Seq+ 32714 ChimerSeq STARFusion TCGA_RNA-Seq ZAK-RAPGEF4 ZAK chr2 173955918 + RAPGEF4 chr2 173894892 + Exonic hg19 LIHC TCGA-GJ-A6C0-01A 2 37 Out-of-frame Intra-chr TKL:MLK q31.1 32715 ChimerSeq STARFusion TCGA_RNA-Seq ZAK-RAPGEF4 ZAK chr2 173955918 + RAPGEF4 chr2 173916368 + Exonic hg19 LIHC TCGA-GJ-A6C0-01A 2 37 Out-of-frame Intra-chr TKL:MLK q31.1 32716 ChimerSeq STARFusion TCGA_RNA-Seq LOC201617-NUP93 LOC201617 chr3 72221210 + NUP93 chr16 56832388 + Exonic hg19 LIHC TCGA-GJ-A6C0-01A 4 24 5'UTR-5'UTR Inter-chr q13 32717 ChimerSeq STARFusion TCGA_RNA-Seq TCF20-LOC100507412 TCF20 chr22 42605657 - LOC100507412 chrUn_gl000220 121829 + Exonic hg19 LIHC TCGA-GJ-A6C0-01A 2 28 CDS-5'UTR Inter-chr Transcription factor 32718 ChimerSeq STARFusion TCGA_RNA-Seq CNIH4-VPS39 CNIH4 chr1 224553693 + VPS39 chr15 42459111 - Exonic hg19 LIHC TCGA-GJ-A6C0-01A 5 13 Out-of-frame Inter-chr q42.11 q15.1 Seq+ 32719 ChimerSeq STARFusion TCGA_RNA-Seq SMIM14-RFC1 SMIM14 chr4 39640359 - RFC1 chr4 39314551 - Exonic hg19 LIHC TCGA-GJ-A6C0-01A 3 14 Out-of-frame Intra-chr p14 p14 Seq+ 32720 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-SLC44A2 DNM2 chr19 10930765 + SLC44A2 chr19 10736929 + Exonic hg19 LIHC TCGA-GJ-A6C0-01A 2 9 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 32721 ChimerSeq STARFusion TCGA_RNA-Seq USP9X-ATP6AP2 USP9X chrX 41031211 + ATP6AP2 chrX 40464813 + Exonic hg19 LIHC TCGA-FV-A496-01A 8 66 Out-of-frame Intra-chr p11.4 Oncogene p11.4 Seq+ 32722 ChimerSeq STARFusion TCGA_RNA-Seq NPLOC4-ALYREF NPLOC4 chr17 79567367 - ALYREF chr17 79848696 - Exonic hg19 LIHC TCGA-FV-A496-01A 3 48 In-Frame Intra-chr q25.3 q25.3 Seq+ 32723 ChimerSeq STARFusion TCGA_RNA-Seq C4BPA-MAPKAPK2 C4BPA chr1 207307937 + MAPKAPK2 chr1 206902055 + Exonic hg19 LIHC TCGA-FV-A496-01A 5 15 Out-of-frame Intra-chr q32.2 q32.1 CAMK:MAPKAPK Seq+ 32724 ChimerSeq STARFusion TCGA_RNA-Seq CHMP4B-CBFA2T2 CHMP4B chr20 32399464 + CBFA2T2 chr20 32224446 + Exonic hg19 LIHC TCGA-FV-A496-01A 7 7 In-Frame Intra-chr q11.22 q11.21 Seq+ 32725 ChimerSeq STARFusion TCGA_RNA-Seq MYLK-PLXND1 MYLK chr3 123345665 - PLXND1 chr3 129297276 - Exonic hg19 LIHC TCGA-FV-A496-01A 2 13 In-Frame Intra-chr q21.1 q22.1 Seq+ 32726 ChimerSeq STARFusion TCGA_RNA-Seq PFDN4-TSHZ2 PFDN4 chr20 52830997 + TSHZ2 chr20 52103683 + Exonic hg19 LIHC TCGA-FV-A496-01A 2 8 CDS-3'UTR Intra-chr q13.2 q13.2 Transcription factor Seq+ 32727 ChimerSeq STARFusion TCGA_RNA-Seq ECHDC1-KIAA0408 ECHDC1 chr6 127635961 - KIAA0408 chr6 127775246 - Exonic hg19 LIHC TCGA-FV-A496-01A 3 2 CDS-5'UTR Intra-chr q22.33 q22.33 32728 ChimerSeq STARFusion TCGA_RNA-Seq ECHDC1-SOGA3 ECHDC1 chr6 127635961 - SOGA3 chr6 127775246 - Exonic hg19 LIHC TCGA-FV-A496-01A 3 2 3'UTR-3'UTR Intra-chr q22.33 q22.33 32729 ChimerSeq STARFusion TCGA_RNA-Seq NOS1AP-ATF6 NOS1AP chr1 162124266 + ATF6 chr1 161928236 + Exonic hg19 LIHC TCGA-FV-A496-01A 2 2 Out-of-frame Intra-chr q23.3 q23.3 Transcription factor Seq+ 32730 ChimerSeq STARFusion TCGA_RNA-Seq PITHD1-LOC100506963 PITHD1 chr1 24106431 + LOC100506963 chr1 24098916 - Exonic hg19 LIHC TCGA-CC-A7IF-01A 2 5 CDS-3'UTR Intra-chr p36.11 32731 ChimerSeq STARFusion TCGA_RNA-Seq TEX2-ANKFN1 TEX2 chr17 62340528 - ANKFN1 chr17 54559717 + Exonic hg19 LIHC TCGA-RC-A7SB-01A 3 18 5'UTR-CDS Intra-chr q23.3 q22 Seq+ 32732 ChimerSeq STARFusion TCGA_RNA-Seq MT1G-MT2A MT1G chr16 56701923 - MT2A chr16 56642550 + Exonic hg19 LIHC TCGA-UB-A7MC-01A 7 723 Out-of-frame Intra-chr q13 Tumor suppressor gene q13 Tumor suppressor gene 32733 ChimerSeq STARFusion TCGA_RNA-Seq MT1G-MT2A MT1G chr16 56701954 - MT2A chr16 56642501 + Exonic hg19 LIHC TCGA-UB-A7MC-01A 4 723 Out-of-frame Intra-chr q13 Tumor suppressor gene q13 Tumor suppressor gene 32734 ChimerSeq STARFusion TCGA_RNA-Seq PBXIP1-GBAP1 PBXIP1 chr1 154926147 - GBAP1 chr1 155187840 - Exonic hg19 LIHC TCGA-UB-A7MC-01A 2 23 CDS-3'UTR Intra-chr q21.3 q22 Seq+ 32735 ChimerSeq STARFusion TCGA_RNA-Seq EIF4A2-KNG1 EIF4A2 chr3 186504062 + KNG1 chr3 186461494 + Exonic hg19 LIHC TCGA-BC-A10Y-01A 2313 12532 In-Frame Intra-chr q27.3 q27.3 Seq+ 32736 ChimerSeq STARFusion TCGA_RNA-Seq OAZ1-YBX2 OAZ1 chr19 2269743 + YBX2 chr17 7195378 - Exonic hg19 LIHC TCGA-BC-A10Y-01A 199 1553 In-Frame Inter-chr p13.3 p13.1 Transcription factor Seq+ 32737 ChimerSeq STARFusion TCGA_RNA-Seq AMACR-C1QTNF3 AMACR chr5 34004679 - C1QTNF3 chr5 34028988 - Exonic hg19 LIHC TCGA-BC-A10Y-01A 174 742 In-Frame Intra-chr p13.2 p13.2 32738 ChimerSeq STARFusion TCGA_RNA-Seq F2-FOXH1 F2 chr11 46745068 + FOXH1 chr8 145701168 - Exonic hg19 LIHC TCGA-BC-A10Y-01A 121 846 CDS-5'UTR Inter-chr p11.2 q24.3 Transcription factor Seq+ 32739 ChimerSeq STARFusion TCGA_RNA-Seq RXRA-ALG9 RXRA chr9 137218505 + ALG9 chr11 111657244 - Exonic hg19 LIHC TCGA-BC-A10Y-01A 183 233 Out-of-frame Inter-chr q34.2 Transcription factor q23.1 Seq+ 32740 ChimerSeq STARFusion TCGA_RNA-Seq STK38-TDRD7 STK38 chr6 36507849 - TDRD7 chr9 100249454 + Exonic hg19 LIHC TCGA-BC-A10Y-01A 16 113 In-Frame Inter-chr p21.31 q22.33 Seq+ 32741 ChimerSeq STARFusion TCGA_RNA-Seq CPSF1-AHNAK CPSF1 chr8 145620650 - AHNAK chr11 62201363 - Exonic hg19 LIHC TCGA-BC-A10Y-01A 14 91 Out-of-frame Inter-chr q24.3 q12.3 Tumor suppressor gene Seq+ 32742 ChimerSeq STARFusion TCGA_RNA-Seq C8orf47-MATN2 C8orf47 chr8 99076955 + MATN2 chr8 99042690 + Exonic hg19 LIHC TCGA-BC-A10Y-01A 15 72 In-Frame Intra-chr q22.1 Seq+ 32743 ChimerSeq STARFusion TCGA_RNA-Seq UBXN6-ABHD6 UBXN6 chr19 4453927 - ABHD6 chr3 58279316 + Exonic hg19 LIHC TCGA-BC-A10Y-01A 13 72 Out-of-frame Inter-chr p13.3 p14.3 Seq+ 32744 ChimerSeq STARFusion TCGA_RNA-Seq CPSF1-AHNAK CPSF1 chr8 145621563 - AHNAK chr11 62201363 - Exonic hg19 LIHC TCGA-BC-A10Y-01A 5 91 Out-of-frame Inter-chr q24.3 q12.3 Tumor suppressor gene Seq+ 32745 ChimerSeq STARFusion TCGA_RNA-Seq CAMKK2-ANAPC5 CAMKK2 chr12 121734441 - ANAPC5 chr12 121758262 - Exonic hg19 LIHC TCGA-BC-A10Y-01A 18 38 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 32746 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A5-NABP2 SLC39A5 chr12 56624972 + NABP2 chr12 56619232 + Exonic hg19 LIHC TCGA-BC-A10Y-01A 4 93 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 32747 ChimerSeq STARFusion TCGA_RNA-Seq CPNE6-LRRC16B CPNE6 chr14 24542887 + LRRC16B chr14 24528344 + Exonic hg19 LIHC TCGA-BC-A10Y-01A 4 55 Out-of-frame Intra-chr q11.2 Seq+ 32748 ChimerSeq STARFusion TCGA_RNA-Seq LPCAT3-MAP3K13 LPCAT3 chr12 7125578 - MAP3K13 chr3 185003305 + Exonic hg19 LIHC TCGA-BC-A10Y-01A 8 38 CDS-5'UTR Inter-chr p13.31 q27.2 Seq+ 32749 ChimerSeq STARFusion TCGA_RNA-Seq CAPN1-SPDYC CAPN1 chr11 64953809 + SPDYC chr11 64939717 + Exonic hg19 LIHC TCGA-BC-A10Y-01A 4 43 In-Frame Intra-chr q13.1 q13.1 Seq+ 32750 ChimerSeq STARFusion TCGA_RNA-Seq CCS-ACTN3 CCS chr11 66368020 + ACTN3 chr11 66321516 + Exonic hg19 LIHC TCGA-BC-A10Y-01A 7 28 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 32751 ChimerSeq STARFusion TCGA_RNA-Seq DDB1-CPSF7 DDB1 chr11 61099015 - CPSF7 chr11 61189080 - Exonic hg19 LIHC TCGA-BC-A10Y-01A 3 34 In-Frame Intra-chr q12.2 q12.2 Seq+ 32752 ChimerSeq STARFusion TCGA_RNA-Seq PFKFB1-ALAS2 PFKFB1 chrX 55020344 - ALAS2 chrX 55035776 - Exonic hg19 LIHC TCGA-BC-A10Y-01A 7 16 In-Frame Intra-chr p11.21 p11.21 Seq+ 32753 ChimerSeq STARFusion TCGA_RNA-Seq CYP3A5-GJC3 CYP3A5 chr7 99273738 - GJC3 chr7 99521226 - Exonic hg19 LIHC TCGA-BC-A10Y-01A 2 25 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 32754 ChimerSeq STARFusion TCGA_RNA-Seq ACSL1-LOC100506229 ACSL1 chr4 185747070 - LOC100506229 chr4 185815294 - Exonic hg19 LIHC TCGA-BC-A10Y-01A 7 2 5'UTR-3'UTR Intra-chr q35.1 32755 ChimerSeq STARFusion TCGA_RNA-Seq CYP3A5-AZGP1 CYP3A5 chr7 99273738 - AZGP1 chr7 99569629 - Exonic hg19 LIHC TCGA-BC-A10Y-01A 3 11 CDS-5'UTR Intra-chr q22.1 q22.1 Tumor suppressor gene Seq+ 32756 ChimerSeq STARFusion TCGA_RNA-Seq LOC642236-FRG1B LOC642236 chr9 68438559 - FRG1B chr20 29625875 + Exonic hg19 LIHC TCGA-BC-A10Y-01A 4 3 Out-of-frame Inter-chr 32757 ChimerSeq STARFusion TCGA_RNA-Seq GUSBP11-VPREB3 GUSBP11 chr22 24059218 - VPREB3 chr22 24095385 - Exonic hg19 LIHC TCGA-BC-A10Y-01A 2 8 3'UTR-CDS Intra-chr q11.23 q11.23 Seq+ 32758 ChimerSeq STARFusion TCGA_RNA-Seq SDHAF2-REEP3 SDHAF2 chr11 61197654 + REEP3 chr10 65379415 + Exonic hg19 LIHC TCGA-BC-A10Y-01A 3 0 Out-of-frame Inter-chr q12.2 q21.3 32759 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-RAB11B RNA45S5 chrUn_gl000220 117917 + RAB11B chr19 8455273 + Exonic hg19 LIHC TCGA-DD-A4NH-01A 3 1 Out-of-frame Inter-chr p13.2 32760 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB1-PRKACA DNAJB1 chr19 14628951 - PRKACA chr19 14218221 - Exonic hg19 LIHC TCGA-DD-A4NB-01A 115 985 In-Frame Intra-chr p13.12 Tumor suppressor gene p13.12 KB Pub Seq+ 32761 ChimerSeq STARFusion TCGA_RNA-Seq CD46-CD55 CD46 chr1 207943707 + CD55 chr1 207497904 + Exonic hg19 LIHC TCGA-DD-A4NB-01A 4 8 In-Frame Intra-chr q32.2 q32.2 32762 ChimerSeq STARFusion TCGA_RNA-Seq AKR1C6P-GDI2 AKR1C6P chr10 4958385 - GDI2 chr10 5842668 - Exonic hg19 LIHC TCGA-BD-A3ER-01A 7 38 Out-of-frame Intra-chr p15.1 p15.1 32763 ChimerSeq STARFusion TCGA_RNA-Seq MATN2-LAPTM4B MATN2 chr8 99019829 + LAPTM4B chr8 98863625 + Exonic hg19 LIHC TCGA-BD-A3ER-01A 7 34 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 32764 ChimerSeq STARFusion TCGA_RNA-Seq ARID4A-NAA30 ARID4A chr14 58766578 + NAA30 chr14 57863470 + Exonic hg19 LIHC TCGA-BD-A3ER-01A 10 17 In-Frame Intra-chr q23.1 q22.3 Seq+ 32765 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB7B-ZMPSTE24 ZBTB7B chr1 154975419 + ZMPSTE24 chr1 40733458 + Exonic hg19 LIHC TCGA-DD-A4NE-01A 10 33 5'UTR-CDS Intra-chr q21.3 Transcription factor p34.2 Seq+ 32766 ChimerSeq STARFusion TCGA_RNA-Seq NFYC-ZBTB7B NFYC chr1 41157539 + ZBTB7B chr1 154987131 + Exonic hg19 LIHC TCGA-DD-A4NE-01A 9 21 5'UTR-5'UTR Intra-chr p34.2 Transcription factor q21.3 Transcription factor Seq+ 32767 ChimerSeq STARFusion TCGA_RNA-Seq ASPH-DCLK1 ASPH chr8 62438536 - DCLK1 chr13 36397012 - Exonic hg19 LIHC TCGA-DD-A4NE-01A 3 8 Out-of-frame Inter-chr q12.3 q13.3 CAMK:DCAMKL Seq+ 32768 ChimerSeq STARFusion TCGA_RNA-Seq SDCCAG8-DCAF6 SDCCAG8 chr1 243542165 + DCAF6 chr1 168034828 + Exonic hg19 LIHC TCGA-DD-A4NE-01A 2 4 Out-of-frame Intra-chr q24.2 Seq+ 32769 ChimerSeq STARFusion TCGA_RNA-Seq STK38-SRSF3 STK38 chr6 36483115 - SRSF3 chr6 36564538 + Exonic hg19 LIHC TCGA-DD-A4NE-01A 2 2 CDS-5'UTR Intra-chr p21.31 p21.31 Seq+ 32770 ChimerSeq STARFusion TCGA_RNA-Seq TPST2-CRYBB1 TPST2 chr22 26932254 - CRYBB1 chr22 26997985 - Exonic hg19 LIHC TCGA-ZS-A9CF-01A 46 185 In-Frame Intra-chr q12.1 q12.1 Seq+ 32771 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-RELB DNM2 chr19 10829079 + RELB chr19 45537502 + Exonic hg19 LIHC TCGA-ZS-A9CF-01A 24 50 Out-of-frame Intra-chr p13.2 q13.32 Transcription factor Seq+ 32772 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK1-GCK EIF2AK1 chr7 6094177 - GCK chr7 44189663 - Exonic hg19 LIHC TCGA-ZS-A9CF-01A 15 52 Out-of-frame Intra-chr p22.1 p13 STE:STE20 Seq+ 32773 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK1-GCK EIF2AK1 chr7 6094177 - GCK chr7 44189458 - Exonic hg19 LIHC TCGA-ZS-A9CF-01A 5 52 Out-of-frame Intra-chr p22.1 p13 STE:STE20 Seq+ 32774 ChimerSeq STARFusion TCGA_RNA-Seq ALDH1A1-FXYD1 ALDH1A1 chr9 75538935 - FXYD1 chr19 35630980 + Exonic hg19 LIHC TCGA-ZS-A9CF-01A 11 24 CDS-5'UTR Inter-chr q21.13 q13.12 Seq+ 32775 ChimerSeq STARFusion TCGA_RNA-Seq PRR14L-POLD4 PRR14L chr22 32145979 - POLD4 chr11 67120548 - Exonic hg19 LIHC TCGA-ZS-A9CF-01A 10 27 5'UTR-CDS Inter-chr q12.2 q13.2 Seq+ 32776 ChimerSeq STARFusion TCGA_RNA-Seq CAPN12-LGALS7 CAPN12 chr19 39232417 - LGALS7 chr19 39263743 - Exonic hg19 LIHC TCGA-ZS-A9CF-01A 9 29 Out-of-frame Intra-chr q13.2 Tumor suppressor gene Seq+ 32777 ChimerSeq STARFusion TCGA_RNA-Seq KNG1-HRG KNG1 chr3 186461328 + HRG chr3 186395361 + Exonic hg19 LIHC TCGA-ZS-A9CF-01A 7 34 Out-of-frame Intra-chr q27.3 q27.3 Tumor suppressor gene 32778 ChimerSeq STARFusion TCGA_RNA-Seq NMD3-USP40 NMD3 chr3 160953000 + USP40 chr2 234407258 - Exonic hg19 LIHC TCGA-ZS-A9CF-01A 4 46 In-Frame Inter-chr q26.1 q37.1 Seq+ 32779 ChimerSeq STARFusion TCGA_RNA-Seq QARS-LAMB2P1 QARS chr3 49137056 - LAMB2P1 chr3 49191460 - Exonic hg19 LIHC TCGA-ZS-A9CF-01A 6 26 Out-of-frame Intra-chr p21.31 32780 ChimerSeq STARFusion TCGA_RNA-Seq CYP2C18-HELLS CYP2C18 chr10 96466717 + HELLS chr10 96331145 + Exonic hg19 LIHC TCGA-ZS-A9CF-01A 4 26 In-Frame Intra-chr q23.33 q23.33 Seq+ 32781 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1D-OGFOD3 CSNK1D chr17 80203852 - OGFOD3 chr17 80347726 - Exonic hg19 LIHC TCGA-ZS-A9CF-01A 5 20 Out-of-frame Intra-chr q25.3 q25.3 32782 ChimerSeq STARFusion TCGA_RNA-Seq QARS-LAMB2P1 QARS chr3 49137194 - LAMB2P1 chr3 49191444 - Exonic hg19 LIHC TCGA-ZS-A9CF-01A 3 26 CDS-3'UTR Intra-chr p21.31 32783 ChimerSeq STARFusion TCGA_RNA-Seq TRIM7-CCDC64 TRIM7 chr5 180627534 - CCDC64 chr12 120436336 + Exonic hg19 LIHC TCGA-ZS-A9CF-01A 3 26 Out-of-frame Inter-chr q35.3 32784 ChimerSeq STARFusion TCGA_RNA-Seq EFNA1-ADAM15 EFNA1 chr1 155104110 + ADAM15 chr1 155034936 + Exonic hg19 LIHC TCGA-ZS-A9CF-01A 5 17 Out-of-frame Intra-chr q22 q21.3 Seq+ 32785 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1D-OGFOD3 CSNK1D chr17 80203852 - OGFOD3 chr17 80347100 - Exonic hg19 LIHC TCGA-ZS-A9CF-01A 3 20 Out-of-frame Intra-chr q25.3 q25.3 32786 ChimerSeq STARFusion TCGA_RNA-Seq SLC12A7-TERT SLC12A7 chr5 1111983 - TERT chr5 1282739 - Exonic hg19 LIHC TCGA-ZS-A9CF-01A 4 16 In-Frame Intra-chr p15.33 p15.33 Oncogene Seq+ 32787 ChimerSeq STARFusion TCGA_RNA-Seq C19orf60-NT5DC2 C19orf60 chr19 18699710 + NT5DC2 chr3 52563350 - Exonic hg19 LIHC TCGA-ZS-A9CF-01A 2 23 Out-of-frame Inter-chr p13.11 p21.1 Seq+ 32788 ChimerSeq STARFusion TCGA_RNA-Seq ABL1-FUBP3 ABL1 chr9 133589842 + FUBP3 chr9 133493184 + Exonic hg19 LIHC TCGA-ZS-A9CF-01A 5 8 Out-of-frame Intra-chr q34.12 TK:Abl Oncogene q34.11 Seq+ 32789 ChimerSeq STARFusion TCGA_RNA-Seq CAPN12-LGALS7B CAPN12 chr19 39232417 - LGALS7B chr19 39280256 + Exonic hg19 LIHC TCGA-ZS-A9CF-01A 3 15 Out-of-frame Intra-chr q13.2 32790 ChimerSeq STARFusion TCGA_RNA-Seq PHACTR4-SESN2 PHACTR4 chr1 28696336 + SESN2 chr1 28595694 + Exonic hg19 LIHC TCGA-ZS-A9CF-01A 2 18 5'UTR-CDS Intra-chr p35.3 Tumor suppressor gene p35.3 Seq+ 32791 ChimerSeq STARFusion TCGA_RNA-Seq DDX23-RND1 DDX23 chr12 49245867 - RND1 chr12 49255901 - Exonic hg19 LIHC TCGA-ZS-A9CF-01A 4 9 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 32792 ChimerSeq STARFusion TCGA_RNA-Seq HERPUD2-AOAH HERPUD2 chr7 35733794 - AOAH chr7 36580097 - Exonic hg19 LIHC TCGA-ZS-A9CF-01A 2 6 Out-of-frame Intra-chr p14.2 p14.2 Seq+ 32793 ChimerSeq STARFusion TCGA_RNA-Seq ACOT12-SSBP2 ACOT12 chr5 80631587 - SSBP2 chr5 80785128 - Exonic hg19 LIHC TCGA-ZS-A9CF-01A 2 5 Out-of-frame Intra-chr q14.1 q14.1 Tumor suppressor gene Seq+ 32794 ChimerSeq STARFusion TCGA_RNA-Seq IFT81-MYO1H IFT81 chr12 110584853 + MYO1H chr12 109862553 + Exonic hg19 LIHC TCGA-ZS-A9CF-01A 2 1 In-Frame Intra-chr q24.11 q24.11 32795 ChimerSeq STARFusion TCGA_RNA-Seq LOC100130000-LINC00623 LOC100130000 chr1 143687284 + LINC00623 chr1 144301538 - Exonic hg19 LIHC TCGA-DD-A4NO-01A 3 0 Out-of-frame Intra-chr p11.2 32796 ChimerSeq STARFusion TCGA_RNA-Seq RAB8B-TLN2 RAB8B chr15 63481947 + TLN2 chr15 63030413 + Exonic hg19 LIHC TCGA-DD-A4NO-01A 2 3 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 32797 ChimerSeq STARFusion TCGA_RNA-Seq NFIC-C19orf77 NFIC chr19 3382241 + C19orf77 chr19 3478927 - Exonic hg19 LIHC TCGA-5C-A9VG-01A 4 9 In-Frame Intra-chr p13.3 Transcription factor Seq+ 32798 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0319L-CLSPN KIAA0319L chr1 35936464 - CLSPN chr1 36230927 - Exonic hg19 LIHC TCGA-5C-A9VG-01A 4 2 In-Frame Intra-chr p34.3 p34.3 Seq+ 32799 ChimerSeq STARFusion TCGA_RNA-Seq SMEK2-PNPT1 SMEK2 chr2 55831114 - PNPT1 chr2 55864734 - Exonic hg19 LIHC TCGA-UB-A7MB-01A 8 60 In-Frame Intra-chr p16.1 32800 ChimerSeq STARFusion TCGA_RNA-Seq GLIS3-GOLM1 GLIS3 chr9 4286038 - GOLM1 chr9 88661487 - Exonic hg19 LIHC TCGA-UB-A7MB-01A 5 8 In-Frame Intra-chr p24.2 Transcription factor q21.33 Seq+ 32801 ChimerSeq STARFusion TCGA_RNA-Seq MARK3-DIO3OS MARK3 chr14 103946827 + DIO3OS chr14 102019091 - Exonic hg19 LIHC TCGA-UB-A7MB-01A 4 6 CDS-3'UTR Intra-chr q32.32 CAMK:CAMKL q32.31 Seq+ 32802 ChimerSeq STARFusion TCGA_RNA-Seq TPMT-KIF13A TPMT chr6 18148054 - KIF13A chr6 17794935 - Exonic hg19 LIHC TCGA-UB-A7MB-01A 3 1 In-Frame Intra-chr p22.3 p22.3 32803 ChimerSeq STARFusion TCGA_RNA-Seq AFM-ALB AFM chr4 74354476 + ALB chr4 74279137 + Exonic hg19 LIHC TCGA-UB-A7MB-01A 2 0 In-Frame Intra-chr q13.3 q13.3 32804 ChimerSeq STARFusion TCGA_RNA-Seq AFP-ALB AFP chr4 74304023 + ALB chr4 74286809 + Exonic hg19 LIHC TCGA-DD-A73G-01A 50 172 5'UTR-3'UTR Intra-chr q13.3 q13.3 32805 ChimerSeq STARFusion TCGA_RNA-Seq MTHFS-BCL2A1 MTHFS chr15 80181435 - BCL2A1 chr15 80253516 - Exonic hg19 LIHC TCGA-DD-A73G-01A 34 84 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 32806 ChimerSeq STARFusion TCGA_RNA-Seq TRIO-LOC100505806 TRIO chr5 14420130 + LOC100505806 chr5 9549102 + Exonic hg19 LIHC TCGA-DD-A73G-01A 23 83 CDS-5'UTR Intra-chr p15.2 32807 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R1B-ALG9 PPP2R1B chr11 111618678 - ALG9 chr11 111680497 - Exonic hg19 LIHC TCGA-DD-A73G-01A 7 30 Out-of-frame Intra-chr q23.1 Tumor suppressor gene q23.1 Seq+ 32808 ChimerSeq STARFusion TCGA_RNA-Seq MTHFS-ST20 MTHFS chr15 80181435 - ST20 chr15 80191467 - Exonic hg19 LIHC TCGA-DD-A73G-01A 7 17 Out-of-frame Intra-chr q25.1 q25.1 Tumor suppressor gene 32809 ChimerSeq STARFusion TCGA_RNA-Seq CCNT1-LOC255411 CCNT1 chr12 49108226 - LOC255411 chr12 49152992 + Exonic hg19 LIHC TCGA-DD-A73G-01A 9 7 CDS-5'UTR Intra-chr q13.12 32810 ChimerSeq STARFusion TCGA_RNA-Seq MLLT10-SKIDA1 MLLT10 chr10 21906136 + SKIDA1 chr10 21812800 - Exonic hg19 LIHC TCGA-DD-A73G-01A 2 9 Out-of-frame Intra-chr p12.31 Oncogene p12.31 Seq+ 32811 ChimerSeq STARFusion TCGA_RNA-Seq PPCDC-CES1 PPCDC chr15 75315967 + CES1 chr16 55844919 - Exonic hg19 LIHC TCGA-G3-A7M8-01A 2 0 5'UTR-CDS Inter-chr q24.2 q12.2 32812 ChimerSeq STARFusion TCGA_RNA-Seq VAPA-RAB31 VAPA chr18 9937063 + RAB31 chr18 9775275 + Exonic hg19 LIHC TCGA-ZP-A9D0-01A 16 41 In-Frame Intra-chr p11.22 p11.22 Seq+ 32813 ChimerSeq STARFusion TCGA_RNA-Seq RAB11B-ANGPTL4 RAB11B chr19 8467449 + ANGPTL4 chr19 8438589 + Exonic hg19 LIHC TCGA-ZP-A9D0-01A 4 37 In-Frame Intra-chr p13.2 p13.2 Tumor suppressor gene Seq+ 32814 ChimerSeq STARFusion TCGA_RNA-Seq USP45-ASCC3 USP45 chr6 99912480 - ASCC3 chr6 100988263 - Exonic hg19 LIHC TCGA-ZP-A9D0-01A 5 24 In-Frame Intra-chr q16.2 q16.3 Seq+ 32815 ChimerSeq STARFusion TCGA_RNA-Seq LOC100130872-TMEM176B LOC100130872 chr4 1198770 - TMEM176B chr7 150493662 - Exonic hg19 LIHC TCGA-T1-A6J8-01A 2 2 3'UTR-5'UTR Inter-chr q36.1 32816 ChimerSeq STARFusion TCGA_RNA-Seq C3orf27-SCNM1 C3orf27 chr3 128294109 - SCNM1 chr1 151138947 + Exonic hg19 LIHC TCGA-ED-A459-01A 2 0 5'UTR-5'UTR Inter-chr q21.3 32817 ChimerSeq STARFusion TCGA_RNA-Seq AP1G1-PMFBP1 AP1G1 chr16 71803526 - PMFBP1 chr16 72188358 - Exonic hg19 LIHC TCGA-DD-A73C-01A 14 37 In-Frame Intra-chr q22.2 q22.2 Seq+ 32818 ChimerSeq STARFusion TCGA_RNA-Seq CCDC152-HP CCDC152 chr5 42801243 + HP chr16 72094658 + Exonic hg19 LIHC TCGA-DD-A73C-01A 3 28 Out-of-frame Inter-chr p12 q22.2 Tumor suppressor gene Seq+ 32819 ChimerSeq STARFusion TCGA_RNA-Seq CLDN9-HP CLDN9 chr16 3063632 + HP chr16 72090064 + Exonic hg19 LIHC TCGA-DD-A73C-01A 3 1 Out-of-frame Intra-chr p13.3 q22.2 Tumor suppressor gene 32820 ChimerSeq STARFusion TCGA_RNA-Seq RREB1-F13A1 RREB1 chr6 7108293 + F13A1 chr6 6318915 - Exonic hg19 LIHC TCGA-CC-A3M9-01A 3 16 5'UTR-5'UTR Intra-chr p24.3 Transcription factor p25.1 Seq+ 32821 ChimerSeq STARFusion TCGA_RNA-Seq NRXN3-ADCK1 NRXN3 chr14 78710145 + ADCK1 chr14 78397861 + Exonic hg19 LIHC TCGA-CC-A3M9-01A 3 12 5'UTR-CDS Intra-chr q24.3 q24.3 Atypical:ABC1 Seq+ 32822 ChimerSeq STARFusion TCGA_RNA-Seq BTAF1-VTI1A BTAF1 chr10 93683847 + VTI1A chr10 114286846 + Exonic hg19 LIHC TCGA-CC-A3M9-01A 2 2 Out-of-frame Intra-chr q23.32 q25.2 32823 ChimerSeq STARFusion TCGA_RNA-Seq COG6-GPC5 COG6 chr13 40301685 + GPC5 chr13 93518535 + Exonic hg19 LIHC TCGA-CC-A3M9-01A 2 2 Out-of-frame Intra-chr q14.11 q31.3 Tumor suppressor gene Seq+ 32824 ChimerSeq STARFusion TCGA_RNA-Seq TTC28-CHEK2 TTC28 chr22 29075610 - CHEK2 chr22 29121355 - Exonic hg19 LIHC TCGA-DD-A73D-01A 3 1 Out-of-frame Intra-chr q12.1 q12.1 Oncogene Tumor suppressor gene 32825 ChimerSeq STARFusion TCGA_RNA-Seq LOC100144603-CPT1B LOC100144603 chr22 51022221 + CPT1B chr22 51015463 - Exonic hg19 LIHC TCGA-BC-A3KG-01A 16 47 5'UTR-CDS Intra-chr q13.33 32826 ChimerSeq STARFusion TCGA_RNA-Seq COBLL1-SLC38A11 COBLL1 chr2 165697666 - SLC38A11 chr2 165772483 - Exonic hg19 LIHC TCGA-BC-A3KG-01A 17 24 In-Frame Intra-chr q24.3 q24.3 Seq+ 32827 ChimerSeq STARFusion TCGA_RNA-Seq ZNF410-ANKS3 ZNF410 chr14 74364965 + ANKS3 chr16 4748063 - Exonic hg19 LIHC TCGA-BC-A3KG-01A 9 42 Out-of-frame Inter-chr q24.3 Transcription factor p13.3 Seq+ 32828 ChimerSeq STARFusion TCGA_RNA-Seq TRAF2-MAMDC4 TRAF2 chr9 139804446 + MAMDC4 chr9 139748663 + Exonic hg19 LIHC TCGA-BC-A3KG-01A 8 43 Out-of-frame Intra-chr q34.3 Tumor suppressor gene q34.3 Seq+ 32829 ChimerSeq STARFusion TCGA_RNA-Seq CIDEB-PTEN CIDEB chr14 24775580 - PTEN chr10 89711875 + Exonic hg19 LIHC TCGA-BC-A3KG-01A 3 52 In-Frame Inter-chr q12 q23.31 Oncogene Tumor suppressor gene Seq+ 32830 ChimerSeq STARFusion TCGA_RNA-Seq TRAF2-MAMDC4 TRAF2 chr9 139804446 + MAMDC4 chr9 139748444 + Exonic hg19 LIHC TCGA-BC-A3KG-01A 3 43 In-Frame Intra-chr q34.3 Tumor suppressor gene q34.3 Seq+ 32831 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D22B-FGD2 TBC1D22B chr6 37259133 + FGD2 chr6 36982422 + Exonic hg19 LIHC TCGA-BC-A3KG-01A 7 26 In-Frame Intra-chr p21.2 p21.2 Seq+ 32832 ChimerSeq STARFusion TCGA_RNA-Seq FAM160A1-CCNA2 FAM160A1 chr4 152403800 + CCNA2 chr4 122742246 - Exonic hg19 LIHC TCGA-BC-A3KG-01A 4 37 5'UTR-CDS Intra-chr q31.3 q27 Seq+ 32833 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R2-CBX1 PPP6R2 chr22 50845304 + CBX1 chr17 46152462 - Exonic hg19 LIHC TCGA-BC-A3KG-01A 6 26 In-Frame Inter-chr q13.33 q21.32 Seq+ 32834 ChimerSeq STARFusion TCGA_RNA-Seq CIDEB-PTENP1 CIDEB chr14 24775580 - PTENP1 chr9 33676157 - Exonic hg19 LIHC TCGA-BC-A3KG-01A 8 14 CDS-3'UTR Inter-chr q12 p13.3 Tumor suppressor gene 32835 ChimerSeq STARFusion TCGA_RNA-Seq PAIP1-LOC100652772 PAIP1 chr5 43547830 - LOC100652772 chr5 43576037 - Exonic hg19 LIHC TCGA-BC-A3KG-01A 4 30 Out-of-frame Intra-chr p12 32836 ChimerSeq STARFusion TCGA_RNA-Seq SSH1-SVOP SSH1 chr12 109246414 - SVOP chr12 109354823 - Exonic hg19 LIHC TCGA-BC-A3KG-01A 2 30 Out-of-frame Intra-chr q24.11 q24.11 Seq+ 32837 ChimerSeq STARFusion TCGA_RNA-Seq ICAM1-PRR14L ICAM1 chr19 10385704 + PRR14L chr22 32080375 - Exonic hg19 LIHC TCGA-BC-A3KG-01A 4 8 CDS-3'UTR Inter-chr p13.2 q12.2 Seq+ 32838 ChimerSeq STARFusion TCGA_RNA-Seq MTHFS-BCL2A1 MTHFS chr15 80181435 - BCL2A1 chr15 80253516 - Exonic hg19 LIHC TCGA-BC-A3KG-01A 3 10 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 32839 ChimerSeq STARFusion TCGA_RNA-Seq EPB41-YTHDF2 EPB41 chr1 29365938 + YTHDF2 chr1 29095441 + Exonic hg19 LIHC TCGA-BC-A3KG-01A 3 4 Out-of-frame Intra-chr p35.3 Tumor suppressor gene p35.3 Seq+ 32840 ChimerSeq STARFusion TCGA_RNA-Seq MTSS1-KIAA0196 MTSS1 chr8 125597328 - KIAA0196 chr8 126040949 - Exonic hg19 LIHC TCGA-QA-A7B7-01A 80 626 Out-of-frame Intra-chr q24.13 Tumor suppressor gene Seq+ 32841 ChimerSeq STARFusion TCGA_RNA-Seq MTSS1-KIAA0196 MTSS1 chr8 125597329 - KIAA0196 chr8 126040951 - Exonic hg19 LIHC TCGA-QA-A7B7-01A 31 626 Out-of-frame Intra-chr q24.13 Tumor suppressor gene Seq+ 32842 ChimerSeq STARFusion TCGA_RNA-Seq MTSS1-KIAA0196 MTSS1 chr8 125592792 - KIAA0196 chr8 126040949 - Exonic hg19 LIHC TCGA-QA-A7B7-01A 15 626 Out-of-frame Intra-chr q24.13 Tumor suppressor gene Seq+ 32843 ChimerSeq STARFusion TCGA_RNA-Seq PDLIM5-SMARCAD1 PDLIM5 chr4 95497185 + SMARCAD1 chr4 95210624 + Exonic hg19 LIHC TCGA-QA-A7B7-01A 30 54 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 32844 ChimerSeq STARFusion TCGA_RNA-Seq FOXO1-MRPS31 FOXO1 chr13 41239720 - MRPS31 chr13 41303737 - Exonic hg19 LIHC TCGA-QA-A7B7-01A 13 50 Out-of-frame Intra-chr q14.11 Oncogene Tumor suppressor gene Transcription factor q14.11 Seq+ 32845 ChimerSeq STARFusion TCGA_RNA-Seq MCRS1-C1QL4 MCRS1 chr12 49956784 - C1QL4 chr12 49727016 - Exonic hg19 LIHC TCGA-QA-A7B7-01A 7 21 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 32846 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS6-PPP6R3 TMPRSS6 chr22 37499256 - PPP6R3 chr11 68377372 + Exonic hg19 LIHC TCGA-2Y-A9GT-01A 22 910 Out-of-frame Inter-chr q12.3 Tumor suppressor gene q13.2 Seq+ 32847 ChimerSeq STARFusion TCGA_RNA-Seq GNPAT-TRIM67 GNPAT chr1 231377202 + TRIM67 chr1 231335894 + Exonic hg19 LIHC TCGA-G3-AAV7-01A 5 11 In-Frame Intra-chr q42.2 q42.2 Seq+ 32848 ChimerSeq STARFusion TCGA_RNA-Seq STAU2-RALYL STAU2 chr8 74659018 - RALYL chr8 85785519 + Exonic hg19 LIHC TCGA-EP-A12J-01A 23 19 5'UTR-CDS Intra-chr q21.11 q21.2 Seq+ 32849 ChimerSeq STARFusion TCGA_RNA-Seq AFM-ALB AFM chr4 74368827 + ALB chr4 74270086 + Exonic hg19 LIHC TCGA-EP-A12J-01A 3 29 3'UTR-CDS Intra-chr q13.3 q13.3 32850 ChimerSeq STARFusion TCGA_RNA-Seq SSSCA1-FRMD8 SSSCA1 chr11 65338441 + FRMD8 chr11 65178713 + Exonic hg19 LIHC TCGA-EP-A12J-01A 2 4 In-Frame Intra-chr q13.1 q13.1 Seq+ 32851 ChimerSeq STARFusion TCGA_RNA-Seq TCF7L2-HABP2 TCF7L2 chr10 114799885 + HABP2 chr10 115327248 + Exonic hg19 LIHC TCGA-LG-A6GG-01A 3 3 In-Frame Intra-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q25.3 32852 ChimerSeq STARFusion TCGA_RNA-Seq TTPAL-R3HDML TTPAL chr20 43109084 + R3HDML chr20 42979300 + Exonic hg19 LIHC TCGA-LG-A6GG-01A 3 1 Out-of-frame Intra-chr q13.12 q13.12 32853 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB1-PRKACA DNAJB1 chr19 14628951 - PRKACA chr19 14218221 - Exonic hg19 LIHC TCGA-5R-AA1D-01A 31 166 In-Frame Intra-chr p13.12 Tumor suppressor gene p13.12 KB Pub Seq+ 32854 ChimerSeq STARFusion TCGA_RNA-Seq GLCE-LINC00277 GLCE chr15 69453096 + LINC00277 chr15 69383255 + Exonic hg19 LIHC TCGA-5R-AA1D-01A 10 21 5'UTR-5'UTR Intra-chr q23 32855 ChimerSeq STARFusion TCGA_RNA-Seq C3orf17-RPN2 C3orf17 chr3 112738389 - RPN2 chr20 35852281 + Exonic hg19 LIHC TCGA-KR-A7K0-01A 2 0 Out-of-frame Inter-chr q11.23 32856 ChimerSeq STARFusion TCGA_RNA-Seq KCNMA1-DOCK1 KCNMA1 chr10 78880731 - DOCK1 chr10 129249596 + Exonic hg19 LIHC TCGA-CC-A7IJ-01A 2 19 Out-of-frame Intra-chr q22.3 q26.2 Seq+ 32857 ChimerSeq STARFusion TCGA_RNA-Seq MOB3A-VCL MOB3A chr19 2096225 - VCL chr10 75877781 + Exonic hg19 LIHC TCGA-CC-A7IJ-01A 5 4 5'UTR-CDS Inter-chr p13.3 q22.2 Seq+ 32858 ChimerSeq STARFusion TCGA_RNA-Seq HTR7-MMRN2 HTR7 chr10 92616890 - MMRN2 chr10 88705446 - Exonic hg19 LIHC TCGA-CC-A7IJ-01A 2 1 In-Frame Intra-chr q23.31 q23.2 32859 ChimerSeq STARFusion TCGA_RNA-Seq OGT-TAF1 OGT chrX 70784603 + TAF1 chrX 70678091 + Exonic hg19 LIHC TCGA-CC-A7IJ-01A 2 1 In-Frame Intra-chr q13.1 q13.1 Atypical:TAF1 Oncogene 32860 ChimerSeq STARFusion TCGA_RNA-Seq VWA9-SERPINA1 VWA9 chr15 65903575 - SERPINA1 chr14 94844974 - Exonic hg19 LIHC TCGA-G3-A25V-01A 3 0 Out-of-frame Inter-chr q32.13 32861 ChimerSeq STARFusion TCGA_RNA-Seq XRRA1-SHANK2 XRRA1 chr11 74641345 - SHANK2 chr11 70821095 - Exonic hg19 LIHC TCGA-2Y-A9GS-01A 24 135 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 32862 ChimerSeq STARFusion TCGA_RNA-Seq XRRA1-SHANK2 XRRA1 chr11 74647929 - SHANK2 chr11 70821095 - Exonic hg19 LIHC TCGA-2Y-A9GS-01A 4 135 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 32863 ChimerSeq STARFusion TCGA_RNA-Seq XRRA1-SHANK2 XRRA1 chr11 74644870 - SHANK2 chr11 70821095 - Exonic hg19 LIHC TCGA-2Y-A9GS-01A 4 135 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 32864 ChimerSeq STARFusion TCGA_RNA-Seq SFPQ-TFEB SFPQ chr1 35654604 - TFEB chr6 41658973 - Exonic hg19 LIHC TCGA-MR-A520-01A 11 51 CDS-5'UTR Inter-chr p34.3 p21.1 Transcription factor Seq+ 32865 ChimerSeq STARFusion TCGA_RNA-Seq ALB-MSL3 ALB chr4 74276127 + MSL3 chrX 11778604 + Exonic hg19 LIHC TCGA-MR-A520-01A 7 1 Out-of-frame Inter-chr q13.3 p22.2 32866 ChimerSeq STARFusion TCGA_RNA-Seq ALB-SERPINA1 ALB chr4 74285319 + SERPINA1 chr14 94849299 - Exonic hg19 LIHC TCGA-UB-AA0V-01A 3 35 Out-of-frame Inter-chr q13.3 q32.13 32867 ChimerSeq STARFusion TCGA_RNA-Seq MLPH-RAMP1 MLPH chr2 238402179 + RAMP1 chr2 238820170 + Exonic hg19 LIHC TCGA-ED-A7XP-01A 3 18 In-Frame Intra-chr q37.3 q37.3 Seq+ 32868 ChimerSeq STARFusion TCGA_RNA-Seq CLU-MT1G CLU chr8 27455616 - MT1G chr16 56701945 - Exonic hg19 LIHC TCGA-ED-A7XP-01A 3 11 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q13 Tumor suppressor gene Seq+ 32869 ChimerSeq STARFusion TCGA_RNA-Seq MORC3-DOPEY2 MORC3 chr21 37742174 + DOPEY2 chr21 37660312 + Exonic hg19 LIHC TCGA-O8-A75V-01A 5 1 Out-of-frame Intra-chr q22.12 q22.12 Seq+ 32870 ChimerSeq STARFusion TCGA_RNA-Seq ST3GAL5-POLR1A ST3GAL5 chr2 86115947 - POLR1A chr2 86258758 - Exonic hg19 LIHC TCGA-O8-A75V-01A 2 0 Out-of-frame Intra-chr p11.2 p11.2 32871 ChimerSeq STARFusion TCGA_RNA-Seq DDI2-C4BPB DDI2 chr1 15944303 + C4BPB chr1 207262827 + Exonic hg19 LIHC TCGA-G3-A7M7-01A 38 101 CDS-5'UTR Intra-chr p36.21 q32.1 Seq+ 32872 ChimerSeq STARFusion TCGA_RNA-Seq LPP-AK1 LPP chr3 187871809 + AK1 chr9 130636928 - Exonic hg19 LIHC TCGA-G3-A7M7-01A 23 57 5'UTR-5'UTR Inter-chr q27.3 Oncogene q34.11 Seq+ 32873 ChimerSeq STARFusion TCGA_RNA-Seq GDA-FAM69B GDA chr9 74764598 + FAM69B chr9 139612029 + Exonic hg19 LIHC TCGA-G3-A7M7-01A 16 53 In-Frame Intra-chr q21.13 q34.3 Seq+ 32874 ChimerSeq STARFusion TCGA_RNA-Seq CREB3L3-PKN3 CREB3L3 chr19 4171172 + PKN3 chr9 131467582 + Exonic hg19 LIHC TCGA-G3-A7M7-01A 10 25 In-Frame Inter-chr p13.3 Transcription factor q34.11 AGC:PKN Seq+ 32875 ChimerSeq STARFusion TCGA_RNA-Seq STAT3-TPM3 STAT3 chr17 40497577 - TPM3 chr1 154148724 - Exonic hg19 LIHC TCGA-G3-A7M7-01A 8 25 In-Frame Inter-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q21.3 Seq+ 32876 ChimerSeq STARFusion TCGA_RNA-Seq RPL31-NPAS2 RPL31 chr2 101622533 + NPAS2 chr2 101611862 + Exonic hg19 LIHC TCGA-G3-A7M7-01A 2 10 Out-of-frame Intra-chr q11.2 q11.2 Tumor suppressor gene Transcription factor 32877 ChimerSeq STARFusion TCGA_RNA-Seq STAT3-C1orf43 STAT3 chr17 40497577 - C1orf43 chr1 154180124 - Exonic hg19 LIHC TCGA-G3-A7M7-01A 2 3 Out-of-frame Inter-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q21.3 Seq+ 32878 ChimerSeq STARFusion TCGA_RNA-Seq PDHB-C3orf67 PDHB chr3 58415435 - C3orf67 chr3 58739590 - Exonic hg19 LIHC TCGA-DD-A73A-01A 8 69 Out-of-frame Intra-chr p14.3 p14.2 Seq+ 32879 ChimerSeq STARFusion TCGA_RNA-Seq BAX-VAV2 BAX chr19 49464171 + VAV2 chr9 136629231 - Exonic hg19 LIHC TCGA-DD-A73A-01A 3 10 In-Frame Inter-chr q13.33 Tumor suppressor gene q34.2 Seq+ 32880 ChimerSeq STARFusion TCGA_RNA-Seq SLC12A7-TERT SLC12A7 chr5 1111983 - TERT chr5 1282739 - Exonic hg19 LIHC TCGA-DD-A73A-01A 2 3 In-Frame Intra-chr p15.33 p15.33 Oncogene Seq+ 32881 ChimerSeq STARFusion TCGA_RNA-Seq FN1-NNMT FN1 chr2 216232586 - NNMT chr11 114168673 + Exonic hg19 LIHC TCGA-DD-A73A-01A 2 1 In-Frame Inter-chr q35 Oncogene q23.2 32882 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-TXN2 MYH9 chr22 36783852 - TXN2 chr22 36863964 - Exonic hg19 LIHC TCGA-BC-A10R-01A 35 108 5'UTR-CDS Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Seq+ 32883 ChimerSeq STARFusion TCGA_RNA-Seq CCNT2-ACMSD CCNT2 chr2 135677461 + ACMSD chr2 135602803 + Exonic hg19 LIHC TCGA-BC-A10R-01A 22 94 In-Frame Intra-chr q21.3 q21.3 Seq+ 32884 ChimerSeq STARFusion TCGA_RNA-Seq NSD1-FGFR4 NSD1 chr5 176563031 + FGFR4 chr5 176524446 + Exonic hg19 LIHC TCGA-BC-A10R-01A 20 85 Out-of-frame Intra-chr q35.3 Oncogene q35.2 TK:FGFR Oncogene Seq+ 32885 ChimerSeq STARFusion TCGA_RNA-Seq CCNT2-ACMSD CCNT2 chr2 135677461 + ACMSD chr2 135616831 + Exonic hg19 LIHC TCGA-BC-A10R-01A 9 94 In-Frame Intra-chr q21.3 q21.3 Seq+ 32886 ChimerSeq STARFusion TCGA_RNA-Seq EIF3L-AK7 EIF3L chr22 38270531 + AK7 chr14 96922684 + Exonic hg19 LIHC TCGA-BC-A10R-01A 8 9 In-Frame Inter-chr q13.1 q32.2 Seq+ 32887 ChimerSeq STARFusion TCGA_RNA-Seq VNN1-SLC18B1 VNN1 chr6 133032848 - SLC18B1 chr6 133091475 - Exonic hg19 LIHC TCGA-BC-A10R-01A 4 20 In-Frame Intra-chr q23.2 q23.2 Seq+ 32888 ChimerSeq STARFusion TCGA_RNA-Seq NFIC-CELF5 NFIC chr19 3382241 + CELF5 chr19 3273870 + Exonic hg19 LIHC TCGA-BC-A10R-01A 5 11 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 32889 ChimerSeq STARFusion TCGA_RNA-Seq STK24-DOCK9 STK24 chr13 99228999 - DOCK9 chr13 99462545 - Exonic hg19 LIHC TCGA-BC-A10R-01A 4 11 Out-of-frame Intra-chr q32.2 q32.3 Seq+ 32890 ChimerSeq STARFusion TCGA_RNA-Seq SLC12A7-CLPTM1L SLC12A7 chr5 1073748 - CLPTM1L chr5 1331998 - Exonic hg19 LIHC TCGA-BC-A10R-01A 3 10 In-Frame Intra-chr p15.33 p15.33 Seq+ 32891 ChimerSeq STARFusion TCGA_RNA-Seq TAF2-DSCC1 TAF2 chr8 120814034 - DSCC1 chr8 120850647 - Exonic hg19 LIHC TCGA-BC-A10R-01A 3 9 In-Frame Intra-chr q24.12 q24.12 Seq+ 32892 ChimerSeq STARFusion TCGA_RNA-Seq AGFG2-COPS6 AGFG2 chr7 100151881 + COPS6 chr7 99689272 + Exonic hg19 LIHC TCGA-BC-A10R-01A 3 8 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 32893 ChimerSeq STARFusion TCGA_RNA-Seq TMEM50B-GART TMEM50B chr21 34852145 - GART chr21 34883765 - Exonic hg19 LIHC TCGA-BC-A10R-01A 2 11 5'UTR-CDS Intra-chr Seq+ 32894 ChimerSeq STARFusion TCGA_RNA-Seq CYP27A1-STK36 CYP27A1 chr2 219647160 + STK36 chr2 219538348 + Exonic hg19 LIHC TCGA-BC-A10R-01A 2 5 In-Frame Intra-chr q35 q35 Oncogene Seq+ 32895 ChimerSeq STARFusion TCGA_RNA-Seq PTGDS-ITIH3 PTGDS chr9 139872144 + ITIH3 chr3 52832982 + Exonic hg19 LIHC TCGA-BC-A10R-01A 2 3 In-Frame Inter-chr q34.3 p21.1 32896 ChimerSeq STARFusion TCGA_RNA-Seq HSD17B11-SPARCL1 HSD17B11 chr4 88303407 - SPARCL1 chr4 88403712 - Exonic hg19 LIHC TCGA-BC-A10R-01A 2 2 Out-of-frame Intra-chr q22.1 q22.1 Tumor suppressor gene Seq+ 32897 ChimerSeq STARFusion TCGA_RNA-Seq PI4KAP1-GGT3P PI4KAP1 chr22 20393534 - GGT3P chr22 18769844 - Exonic hg19 LIHC TCGA-BC-A10R-01A 2 2 3'UTR-3'UTR Intra-chr q11.21 q11.21 32898 ChimerSeq STARFusion TCGA_RNA-Seq NFIC-NCLN NFIC chr19 3382241 + NCLN chr19 3207196 + Exonic hg19 LIHC TCGA-BC-A10R-01A 2 1 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 32899 ChimerSeq STARFusion TCGA_RNA-Seq NUCKS1-RAB7L1 NUCKS1 chr1 205719085 - RAB7L1 chr1 205741695 - Exonic hg19 LIHC TCGA-BC-A10R-01A 2 1 Out-of-frame Intra-chr q32.1 Seq+ 32900 ChimerSeq STARFusion TCGA_RNA-Seq PPWD1-CYHR1 PPWD1 chr5 64859333 + CYHR1 chr8 145690479 - Exonic hg19 LIHC TCGA-BC-A10R-01A 2 0 5'UTR-5'UTR Inter-chr q12.3 q24.3 32901 ChimerSeq STARFusion TCGA_RNA-Seq HSD17B11-UGT2A3 HSD17B11 chr4 88312013 - UGT2A3 chr4 69798477 - Exonic hg19 LIHC TCGA-BD-A2L6-01A 10 81 In-Frame Intra-chr q22.1 Seq+ 32902 ChimerSeq STARFusion TCGA_RNA-Seq HSD17B11-UGT2A3 HSD17B11 chr4 88312013 - UGT2A3 chr4 69796960 - Exonic hg19 LIHC TCGA-BD-A2L6-01A 3 81 In-Frame Intra-chr q22.1 Seq+ 32903 ChimerSeq STARFusion TCGA_RNA-Seq MLLT10-MINPP1 MLLT10 chr10 21823733 + MINPP1 chr10 89311839 + Exonic hg19 LIHC TCGA-BD-A2L6-01A 4 29 In-Frame Intra-chr p12.31 Oncogene q23.2 Seq+ 32904 ChimerSeq STARFusion TCGA_RNA-Seq AMBP-APOA1 AMBP chr9 116822517 - APOA1 chr11 116706692 - Exonic hg19 LIHC TCGA-BD-A2L6-01A 3 28 Out-of-frame Inter-chr q32 q23.3 32905 ChimerSeq STARFusion TCGA_RNA-Seq HSD17B11-UGT2A3 HSD17B11 chr4 88312013 - UGT2A3 chr4_ctg9_hap1 510728 - Exonic hg19 LIHC TCGA-BD-A2L6-01A 3 14 CDS-3'UTR Inter-chr q22.1 Seq+ 32906 ChimerSeq STARFusion TCGA_RNA-Seq PACSIN2-LOC493754 PACSIN2 chr22 43411027 - LOC493754 chr7 66019824 - Exonic hg19 LIHC TCGA-BD-A2L6-01A 3 7 5'UTR-3'UTR Inter-chr q13.2 32907 ChimerSeq STARFusion TCGA_RNA-Seq ANXA4-PKN1 ANXA4 chr2 70008706 + PKN1 chr19 14578377 + Exonic hg19 LIHC TCGA-BC-4072-01B 471 2164 5'UTR-CDS Inter-chr p13.3 p13.12 AGC:PKN Seq+ 32908 ChimerSeq STARFusion TCGA_RNA-Seq PKN1-ANXA4 PKN1 chr19 14574965 + ANXA4 chr2 70015186 + Exonic hg19 LIHC TCGA-BC-4072-01B 20 111 CDS-5'UTR Inter-chr p13.12 AGC:PKN p13.3 Seq+ 32909 ChimerSeq STARFusion TCGA_RNA-Seq HIPK2-KLRG2 HIPK2 chr7 139415731 - KLRG2 chr7 139164518 - Exonic hg19 LIHC TCGA-BC-4072-01B 2 3 Out-of-frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 32910 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB1-PRKACA DNAJB1 chr19 14628951 - PRKACA chr19 14218221 - Exonic hg19 LIHC TCGA-DD-A1EC-01A 245 1453 In-Frame Intra-chr p13.12 Tumor suppressor gene p13.12 KB Pub Seq+ 32911 ChimerSeq STARFusion TCGA_RNA-Seq UGT1A6-JPH3 UGT1A6 chr2 234602511 + JPH3 chr16 87723252 + Exonic hg19 LIHC TCGA-G3-AAV3-01A 2 6 Out-of-frame Inter-chr q37.1 q24.2 Seq+ 32912 ChimerSeq STARFusion TCGA_RNA-Seq PTPRG-C3orf14 PTPRG chr3 61548046 + C3orf14 chr3 62305396 + Exonic hg19 LIHC TCGA-CC-A8HT-01A 3 7 CDS-5'UTR Intra-chr p14.2 p14.2 Seq+ 32913 ChimerSeq STARFusion TCGA_RNA-Seq AFM-ALB AFM chr4 74364963 + ALB chr4 74285224 + Exonic hg19 LIHC TCGA-CC-A8HT-01A 2 6 Out-of-frame Intra-chr q13.3 q13.3 32914 ChimerSeq STARFusion TCGA_RNA-Seq BLOC1S6-HMGN2P46 BLOC1S6 chr15 45879723 + HMGN2P46 chr15 45805896 + Exonic hg19 LIHC TCGA-CC-A8HT-01A 2 6 Out-of-frame Intra-chr q21.1 q21.1 32915 ChimerSeq STARFusion TCGA_RNA-Seq CHD2-LOC100507217 CHD2 chr15 93444529 + LOC100507217 chr15 93428745 + Exonic hg19 LIHC TCGA-CC-A8HT-01A 2 0 CDS-5'UTR Intra-chr q26.1 32916 ChimerSeq STARFusion TCGA_RNA-Seq GALNT16-RAD51B GALNT16 chr14 69727184 + RAD51B chr14 68758601 + Exonic hg19 LIHC TCGA-UB-A7MA-01A 16 29 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 32917 ChimerSeq STARFusion TCGA_RNA-Seq SUGP1-PEPD SUGP1 chr19 19427231 - PEPD chr19 33904549 - Exonic hg19 LIHC TCGA-UB-A7MA-01A 8 18 In-Frame Intra-chr p13.11 q13.11 Seq+ 32918 ChimerSeq STARFusion TCGA_RNA-Seq DDX49-NCAN DDX49 chr19 19031512 + NCAN chr19 19327756 + Exonic hg19 LIHC TCGA-UB-A7MA-01A 5 24 5'UTR-5'UTR Intra-chr p13.11 p13.11 Seq+ 32919 ChimerSeq STARFusion TCGA_RNA-Seq TALDO1-EPS8L2 TALDO1 chr11 760253 + EPS8L2 chr11 720062 + Exonic hg19 LIHC TCGA-UB-A7MA-01A 4 19 Out-of-frame Intra-chr p15.5 p15.5 Seq+ 32920 ChimerSeq STARFusion TCGA_RNA-Seq SUGP1-PEPD SUGP1 chr19 19420906 - PEPD chr19 33904549 - Exonic hg19 LIHC TCGA-UB-A7MA-01A 4 18 Out-of-frame Intra-chr p13.11 q13.11 Seq+ 32921 ChimerSeq STARFusion TCGA_RNA-Seq UBAP2L-TDRKH UBAP2L chr1 154193451 + TDRKH chr1 151755525 - Exonic hg19 LIHC TCGA-UB-A7MA-01A 6 2 5'UTR-5'UTR Intra-chr q21.3 q21.3 Seq+ 32922 ChimerSeq STARFusion TCGA_RNA-Seq POFUT1-HCK POFUT1 chr20 30818864 + HCK chr20 30689120 + Exonic hg19 LIHC TCGA-G3-A25X-01A 28 87 Out-of-frame Intra-chr q11.21 q11.21 TK:Src Seq+ 32923 ChimerSeq STARFusion TCGA_RNA-Seq KIF1B-UBE4B KIF1B chr1 10270936 + UBE4B chr1 10238702 + Exonic hg19 LIHC TCGA-G3-A25X-01A 3 5 5'UTR-CDS Intra-chr p36.22 Tumor suppressor gene p36.22 Tumor suppressor gene Seq+ 32924 ChimerSeq STARFusion TCGA_RNA-Seq FGG-P4HB FGG chr4 155533543 - P4HB chr17 79804505 - Exonic hg19 LIHC TCGA-G3-A25X-01A 2 2 In-Frame Inter-chr q32.1 q25.3 32925 ChimerSeq STARFusion TCGA_RNA-Seq RFWD2-TMCO1 RFWD2 chr1 176153769 - TMCO1 chr1 165697358 - Exonic hg19 LIHC TCGA-G3-A25X-01A 2 1 Out-of-frame Intra-chr q25.2 Tumor suppressor gene q24.1 32926 ChimerSeq STARFusion TCGA_RNA-Seq SYCP2-BCL2L1 SYCP2 chr20 58440443 - BCL2L1 chr20 30253889 - Exonic hg19 LIHC TCGA-G3-A25X-01A 2 1 In-Frame Intra-chr q13.33 q11.21 Oncogene 32927 ChimerSeq STARFusion TCGA_RNA-Seq ERF-NOC4L ERF chr19 42759130 - NOC4L chr12 132635526 + Exonic hg19 LIHC TCGA-G3-A25X-01A 2 0 In-Frame Inter-chr q13.2 Tumor suppressor gene Transcription factor q24.33 32928 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC3-MCF2L DNAJC3 chr13 96329591 + MCF2L chr13 113678958 + Exonic hg19 LIHC TCGA-DD-A1EJ-01A 12 34 In-Frame Intra-chr q32.1 q34 Seq+ 32929 ChimerSeq STARFusion TCGA_RNA-Seq STRN3-MAML3 STRN3 chr14 31495110 - MAML3 chr4 140651821 - Exonic hg19 LIHC TCGA-DD-A1EJ-01A 11 27 In-Frame Inter-chr q12 q31.1 Seq+ 32930 ChimerSeq STARFusion TCGA_RNA-Seq ITPR2-DCDC2 ITPR2 chr12 26780966 - DCDC2 chr6 24278439 - Exonic hg19 LIHC TCGA-DD-A1EJ-01A 11 15 Out-of-frame Inter-chr p11.23 p22.3 Tumor suppressor gene Seq+ 32931 ChimerSeq STARFusion TCGA_RNA-Seq UBE2K-SLC9B2 UBE2K chr4 39757359 + SLC9B2 chr4 103952965 - Exonic hg19 LIHC TCGA-DD-A1EJ-01A 6 14 Out-of-frame Intra-chr p14 q24 Seq+ 32932 ChimerSeq STARFusion TCGA_RNA-Seq ALB-ADH1C ALB chr4 74272478 + ADH1C chr4 100264212 - Exonic hg19 LIHC TCGA-DD-A1EJ-01A 6 10 In-Frame Intra-chr q13.3 q23 Seq+ 32933 ChimerSeq STARFusion TCGA_RNA-Seq MCF2L-GAS6 MCF2L chr13 113669160 + GAS6 chr13 114551023 - Exonic hg19 LIHC TCGA-DD-A1EJ-01A 2 8 Out-of-frame Intra-chr q34 q34 Oncogene Seq+ 32934 ChimerSeq STARFusion TCGA_RNA-Seq CDC25C-DUS1L CDC25C chr5 137664173 - DUS1L chr17 80022945 - Exonic hg19 LIHC TCGA-DD-A1EJ-01A 2 1 CDS-5'UTR Inter-chr q31.2 q25.3 32935 ChimerSeq STARFusion TCGA_RNA-Seq APOC3-AR APOC3 chr11 116703770 + AR chrX 66764976 + Exonic hg19 LIHC TCGA-MI-A75G-01A 4 0 Out-of-frame Inter-chr q23.3 q12 Oncogene Tumor suppressor gene Transcription factor 32936 ChimerSeq STARFusion TCGA_RNA-Seq WAPAL-MMRN2 WAPAL chr10 88277328 - MMRN2 chr10 88696882 - Exonic hg19 LIHC TCGA-DD-A39X-01A 5 24 In-Frame Intra-chr q23.2 Seq+ 32937 ChimerSeq STARFusion TCGA_RNA-Seq BCAT2-NUCB1 BCAT2 chr19 49314241 - NUCB1 chr19 49414406 + Exonic hg19 LIHC TCGA-DD-A39X-01A 2 10 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 32938 ChimerSeq STARFusion TCGA_RNA-Seq NPR2-GCKR NPR2 chr9 35799728 + GCKR chr2 27730548 + Exonic hg19 LIHC TCGA-DD-A39X-01A 2 1 In-Frame Inter-chr p13.3 Tumor suppressor gene p23.3 Seq+ 32939 ChimerSeq STARFusion TCGA_RNA-Seq RPRD2-CA14 RPRD2 chr1 150337395 + CA14 chr1 150236993 + Exonic hg19 LIHC TCGA-G3-A6UC-01A 22 88 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 32940 ChimerSeq STARFusion TCGA_RNA-Seq ARID2-SCAF11 ARID2 chr12 46287504 + SCAF11 chr12 46313092 - Exonic hg19 LIHC TCGA-G3-A6UC-01A 5 6 CDS-3'UTR Intra-chr q12 Oncogene Tumor suppressor gene Transcription factor q12 Seq+ 32941 ChimerSeq STARFusion TCGA_RNA-Seq BSG-SHC2 BSG chr19 572701 + SHC2 chr19 425231 - Exonic hg19 LIHC TCGA-G3-A6UC-01A 2 1 In-Frame Intra-chr p13.3 p13.3 32942 ChimerSeq STARFusion TCGA_RNA-Seq KDM4B-DKKL1 KDM4B chr19 5047680 + DKKL1 chr19 49877974 + Exonic hg19 LIHC TCGA-KR-A7K8-01A 46 110 Out-of-frame Intra-chr p13.3 q13.33 Seq+ 32943 ChimerSeq STARFusion TCGA_RNA-Seq RAD9A-MUS81 RAD9A chr11 67161258 + MUS81 chr11 65632725 + Exonic hg19 LIHC TCGA-KR-A7K8-01A 10 75 Out-of-frame Intra-chr q13.2 q13.1 Tumor suppressor gene Seq+ 32944 ChimerSeq STARFusion TCGA_RNA-Seq CDC27-SNF8 CDC27 chr17 45266512 - SNF8 chr17 47018424 - Exonic hg19 LIHC TCGA-KR-A7K8-01A 5 70 In-Frame Intra-chr q21.32 q21.32 Seq+ 32945 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-ANGPTL4 DNM2 chr19 10829079 + ANGPTL4 chr19 8438589 + Exonic hg19 LIHC TCGA-KR-A7K8-01A 7 48 Out-of-frame Intra-chr p13.2 p13.2 Tumor suppressor gene Seq+ 32946 ChimerSeq STARFusion TCGA_RNA-Seq ASPH-EIF4EBP1 ASPH chr8 62430087 - EIF4EBP1 chr8 37914599 + Exonic hg19 LIHC TCGA-KR-A7K8-01A 7 13 Out-of-frame Intra-chr q12.3 p11.23 Seq+ 32947 ChimerSeq STARFusion TCGA_RNA-Seq DDX17-ENTHD1 DDX17 chr22 38889715 - ENTHD1 chr22 40161614 - Exonic hg19 LIHC TCGA-KR-A7K8-01A 3 25 In-Frame Intra-chr q13.1 q13.1 Seq+ 32948 ChimerSeq STARFusion TCGA_RNA-Seq DUSP10-SUSD4 DUSP10 chr1 221915323 - SUSD4 chr1 223442017 - Exonic hg19 LIHC TCGA-KR-A7K8-01A 4 13 5'UTR-CDS Intra-chr q41 q41 Seq+ 32949 ChimerSeq STARFusion TCGA_RNA-Seq DUSP10-SUSD4 DUSP10 chr1 221912276 - SUSD4 chr1 223442017 - Exonic hg19 LIHC TCGA-KR-A7K8-01A 4 13 In-Frame Intra-chr q41 q41 Seq+ 32950 ChimerSeq STARFusion TCGA_RNA-Seq TFB2M-ZNF124 TFB2M chr1 246711847 - ZNF124 chr1 247287173 - Exonic hg19 LIHC TCGA-KR-A7K8-01A 6 3 Out-of-frame Intra-chr q44 q44 Transcription factor Seq+ 32951 ChimerSeq STARFusion TCGA_RNA-Seq PLCL2-TSEN2 PLCL2 chr3 16926865 + TSEN2 chr3 12560558 + Exonic hg19 LIHC TCGA-KR-A7K8-01A 2 17 Out-of-frame Intra-chr p25.2 Seq+ 32952 ChimerSeq STARFusion TCGA_RNA-Seq PIK3AP1-AVPI1 PIK3AP1 chr10 98408416 - AVPI1 chr10 99437782 - Exonic hg19 LIHC TCGA-KR-A7K8-01A 4 7 Out-of-frame Intra-chr q24.1 q24.2 Seq+ 32953 ChimerSeq STARFusion TCGA_RNA-Seq RAB17-HDAC4 RAB17 chr2 238494641 - HDAC4 chr2 239976529 - Exonic hg19 LIHC TCGA-KR-A7K8-01A 4 7 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 32954 ChimerSeq STARFusion TCGA_RNA-Seq RAB6A-GDPD5 RAB6A chr11 73471611 - GDPD5 chr11 75201365 - Exonic hg19 LIHC TCGA-KR-A7K8-01A 2 7 CDS-5'UTR Intra-chr q13.4 q13.5 Seq+ 32955 ChimerSeq STARFusion TCGA_RNA-Seq TNS3-HUS1 TNS3 chr7 47436397 - HUS1 chr7 48018413 - Exonic hg19 LIHC TCGA-KR-A7K8-01A 3 3 In-Frame Intra-chr p12.3 p12.3 Seq+ 32956 ChimerSeq STARFusion TCGA_RNA-Seq CYP2E1-ASPSCR1 CYP2E1 chr10 135341076 + ASPSCR1 chr17 79966913 + Exonic hg19 LIHC TCGA-BC-A69I-01A 2 1 In-Frame Inter-chr q26.3 q25.3 32957 ChimerSeq STARFusion TCGA_RNA-Seq SRSF3-HAO1 SRSF3 chr6 36566760 + HAO1 chr20 7864310 - Exonic hg19 LIHC TCGA-BC-A69I-01A 2 1 Out-of-frame Inter-chr p21.31 p12.3 32958 ChimerSeq STARFusion TCGA_RNA-Seq VWA9-SERPINA1 VWA9 chr15 65903575 - SERPINA1 chr14 94844974 - Exonic hg19 LIHC TCGA-DD-A3A7-01A 3 0 Out-of-frame Inter-chr q32.13 32959 ChimerSeq STARFusion TCGA_RNA-Seq UBE2D2-CTNNA1 UBE2D2 chr5 138980020 + CTNNA1 chr5 138145727 + Exonic hg19 LIHC TCGA-CC-A7IG-01A 4 3 In-Frame Intra-chr q31.2 q31.2 Oncogene Seq+ 32960 ChimerSeq STARFusion TCGA_RNA-Seq SFXN2-SUFU SFXN2 chr10 104474438 + SUFU chr10 104352339 + Exonic hg19 LIHC TCGA-CC-A7IG-01A 3 3 5'UTR-CDS Intra-chr q24.32 q24.32 Oncogene Tumor suppressor gene Seq+ 32961 ChimerSeq STARFusion TCGA_RNA-Seq C3-APOA1 C3 chr19 6678383 - APOA1 chr11 116707865 - Exonic hg19 LIHC TCGA-G3-A25Z-01A 3 8 In-Frame Inter-chr p13.3 q23.3 32962 ChimerSeq STARFusion TCGA_RNA-Seq FTL-AR FTL chr19 49470103 + AR chrX 66764979 + Exonic hg19 LIHC TCGA-KR-A7K7-01A 31 0 Out-of-frame Inter-chr q13.33 q12 Oncogene Tumor suppressor gene Transcription factor 32963 ChimerSeq STARFusion TCGA_RNA-Seq VWA9-SERPINA1 VWA9 chr15 65903575 - SERPINA1 chr14 94844974 - Exonic hg19 LIHC TCGA-CC-A5UE-01A 17 1 Out-of-frame Inter-chr q32.13 32964 ChimerSeq STARFusion TCGA_RNA-Seq SUPT20H-RPL18 SUPT20H chr13 37633722 - RPL18 chr19 49121132 - Exonic hg19 LIHC TCGA-CC-A5UE-01A 4 0 Out-of-frame Inter-chr q13.3 q13.33 32965 ChimerSeq STARFusion TCGA_RNA-Seq XPR1-NME7 XPR1 chr1 180601406 + NME7 chr1 169138792 - Exonic hg19 LIHC TCGA-G3-A25U-01A 53 249 In-Frame Intra-chr q25.3 q24.2 Seq+ 32966 ChimerSeq STARFusion TCGA_RNA-Seq DYNC2H1-WTAPP1 DYNC2H1 chr11 103178560 + WTAPP1 chr11 102701463 + Exonic hg19 LIHC TCGA-G3-A25U-01A 2 2 Out-of-frame Intra-chr q22.3 q22.2 32967 ChimerSeq STARFusion TCGA_RNA-Seq ABCC3-GON4L ABCC3 chr17 48712342 + GON4L chr1 155823597 - Exonic hg19 LIHC TCGA-DD-A11B-01A 2 0 CDS-5'UTR Inter-chr q21.33 q22 32968 ChimerSeq STARFusion TCGA_RNA-Seq WNK1-ERC1 WNK1 chr12 863490 + ERC1 chr12 1299166 + Exonic hg19 LIHC TCGA-G3-A3CG-01A 3 5 In-Frame Intra-chr p13.33 Seq+ 32969 ChimerSeq STARFusion TCGA_RNA-Seq BCAR1-CFDP1 BCAR1 chr16 75299723 - CFDP1 chr16 75339080 - Exonic hg19 LIHC TCGA-G3-A3CG-01A 2 5 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 32970 ChimerSeq STARFusion TCGA_RNA-Seq CWF19L2-SLN CWF19L2 chr11 107286935 - SLN chr11 107578731 - Exonic hg19 LIHC TCGA-G3-A3CG-01A 2 2 CDS-5'UTR Intra-chr q22.3 q22.3 Seq+ 32971 ChimerSeq STARFusion TCGA_RNA-Seq LBP-F2 LBP chr20 36993406 + F2 chr11 46760598 + Exonic hg19 LIHC TCGA-G3-A3CG-01A 2 1 Out-of-frame Inter-chr q11.23 p11.2 32972 ChimerSeq STARFusion TCGA_RNA-Seq A2M-SERPINA1 A2M chr12 9232690 - SERPINA1 chr14 94844977 - Exonic hg19 LIHC TCGA-DD-A3A3-01A 2 11 Out-of-frame Inter-chr p13.31 q32.13 Seq+ 32973 ChimerSeq STARFusion TCGA_RNA-Seq CAPN5-HSD17B14 CAPN5 chr11 76804859 + HSD17B14 chr19 49318398 - Exonic hg19 LIHC TCGA-DD-AAE2 50 92 In-Frame Inter-chr q13.5 q13.33 Seq+ 32974 ChimerSeq STARFusion TCGA_RNA-Seq ELL-FKBP8 ELL chr19 18632731 - FKBP8 chr19 18652805 - Exonic hg19 LIHC TCGA-DD-AAE2 24 181 CDS-5'UTR Intra-chr p13.11 p13.11 Seq+ 32975 ChimerSeq STARFusion TCGA_RNA-Seq GSTT1-TMEM189 GSTT1 chr22 24384120 - TMEM189 chr20 48700791 - Exonic hg19 LIHC TCGA-DD-AAE2 4 45 CDS-3'UTR Inter-chr Tumor suppressor gene q13.13 32976 ChimerSeq STARFusion TCGA_RNA-Seq GSTT1-UBE2V1 GSTT1 chr22 24384120 - UBE2V1 chr20 48700791 - Exonic hg19 LIHC TCGA-DD-AAE2 4 45 Out-of-frame Inter-chr Tumor suppressor gene q13.13 32977 ChimerSeq STARFusion TCGA_RNA-Seq RANBP10-LCAT RANBP10 chr16 67771916 - LCAT chr16 67974381 - Exonic hg19 LIHC TCGA-DD-AAE2 5 23 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 32978 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-ADSL TNRC6B chr22 40441002 + ADSL chr22 40760280 + Exonic hg19 LIHC TCGA-DD-AAE2 4 18 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 32979 ChimerSeq STARFusion TCGA_RNA-Seq KLHL26-TMEM59L KLHL26 chr19 18779251 + TMEM59L chr19 18724682 + Exonic hg19 LIHC TCGA-DD-AAE2 5 12 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 32980 ChimerSeq STARFusion TCGA_RNA-Seq RNF144B-C6ORF165 RNF144B chr6 18399930 + C6ORF165 chr6 88173738 + Exonic hg19 LIHC TCGA-DD-AAE2 4 14 Out-of-frame Intra-chr p22.3 32981 ChimerSeq STARFusion TCGA_RNA-Seq RNF144B-C6orf165 RNF144B chr6 18399930 + C6orf165 chr6 88173738 + Exonic hg19 LIHC TCGA-DD-AAE2 4 14 In-Frame Intra-chr p22.3 Seq+ 32982 ChimerSeq STARFusion TCGA_RNA-Seq UGT2B11-SULT1D1P UGT2B11 chr4 70079720 - SULT1D1P chr4 70666601 - Exonic hg19 LIHC TCGA-DD-AAE2 2 15 Out-of-frame Intra-chr q13.2 q13.3 Seq+ 32983 ChimerSeq STARFusion TCGA_RNA-Seq RNF144B-C6ORF165 RNF144B chr6 18399930 + C6ORF165 chr6 88144578 + Exonic hg19 LIHC TCGA-DD-AAE2 2 14 Out-of-frame Intra-chr p22.3 32984 ChimerSeq STARFusion TCGA_RNA-Seq RNF144B-C6orf165 RNF144B chr6 18399930 + C6orf165 chr6 88144578 + Exonic hg19 LIHC TCGA-DD-AAE2 2 14 Out-of-frame Intra-chr p22.3 Seq+ 32985 ChimerSeq STARFusion TCGA_RNA-Seq RAB7A-WDR5 RAB7A chr3 128445202 + WDR5 chr9 137004942 + Exonic hg19 LIHC TCGA-DD-AAE2 4 5 5'UTR-5'UTR Inter-chr q21.3 Tumor suppressor gene q34.2 Seq+ 32986 ChimerSeq STARFusion TCGA_RNA-Seq ADI1-DPY30 ADI1 chr2 3523139 - DPY30 chr2 32264561 - Exonic hg19 LIHC TCGA-DD-AAE2 2 6 CDS-5'UTR Intra-chr p22.3 Seq+ 32987 ChimerSeq STARFusion TCGA_RNA-Seq AP3S1-COMMD10 AP3S1 chr5 115177803 + COMMD10 chr5 115627214 + Exonic hg19 LIHC TCGA-DD-AAE3 4 5 In-Frame Intra-chr q22.3 q23.1 32988 ChimerSeq STARFusion TCGA_RNA-Seq SPECC1L-RAD51B SPECC1L chr22 24666951 + RAD51B chr14 69196525 + Exonic hg19 LIHC TCGA-DD-AAE4 8 9 5'UTR-3'UTR Inter-chr q11.23 q24.1 Seq+ 32989 ChimerSeq STARFusion TCGA_RNA-Seq BTBD2-LINC00935 BTBD2 chr19 2013546 - LINC00935 chr12 49152992 + Exonic hg19 LIHC TCGA-DD-AAE4 2 2 Out-of-frame Inter-chr p13.3 32990 ChimerSeq STARFusion TCGA_RNA-Seq BTBD2-LINC00935 BTBD2 chr19 2015296 - LINC00935 chr12 49159390 + Exonic hg19 LIHC TCGA-DD-AAE4 2 2 Out-of-frame Inter-chr p13.3 32991 ChimerSeq STARFusion TCGA_RNA-Seq ZNF678-OBSCN ZNF678 chr1 227770307 + OBSCN chr1 228537591 + Exonic hg19 LIHC TCGA-RC-A7SH-01A 2 2 Out-of-frame Intra-chr q42.13 Transcription factor q42.13 32992 ChimerSeq STARFusion TCGA_RNA-Seq UBE2W-STAU2 UBE2W chr8 74737382 - STAU2 chr8 74516098 - Exonic hg19 LIHC TCGA-DD-AAW2 8 19 In-Frame Intra-chr q21.11 q21.11 Seq+ 32993 ChimerSeq STARFusion TCGA_RNA-Seq HINT2-NPR2 HINT2 chr9 35814896 - NPR2 chr9 35805508 + Exonic hg19 LIHC TCGA-DD-AAW2 2 4 In-Frame Intra-chr p13.3 p13.3 Tumor suppressor gene Seq+ 32994 ChimerSeq STARFusion TCGA_RNA-Seq HINT2-NPR2 HINT2 chr9 35815004 - NPR2 chr9 35805508 + Exonic hg19 LIHC TCGA-DD-AAW2 2 4 5'UTR-CDS Intra-chr p13.3 p13.3 Tumor suppressor gene Seq+ 32995 ChimerSeq STARFusion TCGA_RNA-Seq SOCS5-SLC8A1 SOCS5 chr2 46926588 + SLC8A1 chr2 40680489 - Exonic hg19 LIHC TCGA-DD-AAW0 3 5 5'UTR-5'UTR Intra-chr p21 p22.1 Seq+ 32996 ChimerSeq STARFusion TCGA_RNA-Seq ADH1B-SARM1 ADH1B chr4 100228900 - SARM1 chr17 26698767 + Exonic hg19 LIHC TCGA-DD-AAW1 9 0 Out-of-frame Inter-chr q23 q11.2 32997 ChimerSeq STARFusion TCGA_RNA-Seq ABCC2-CTNNA3 ABCC2 chr10 101544538 + CTNNA3 chr10 67680375 - Exonic hg19 LIHC TCGA-DD-AAEA 73 155 In-Frame Intra-chr q24.2 q21.3 Tumor suppressor gene Seq+ 32998 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD28-COLQ ANKRD28 chr3 15793257 - COLQ chr3 15507944 - Exonic hg19 LIHC TCGA-DD-AAEE 8 17 In-Frame Intra-chr p25.1 p25.1 Seq+ 32999 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-LRP5 PPP6R3 chr11 68363686 + LRP5 chr11 68115315 + Exonic hg19 LIHC TCGA-DD-AAEG 6 8 In-Frame Intra-chr q13.2 q13.2 Seq+ 33000 ChimerSeq STARFusion TCGA_RNA-Seq CEBPZ-MAP4K3 CEBPZ chr2 37456092 - MAP4K3 chr2 39477846 - Exonic hg19 LIHC TCGA-DD-AAEG 5 9 In-Frame Intra-chr p22.2 Transcription factor p22.1 Seq+ 33001 ChimerSeq STARFusion TCGA_RNA-Seq HS2ST1-SH3GLB1 HS2ST1 chr1 87380843 + SH3GLB1 chr1 87185190 + Exonic hg19 LIHC TCGA-DD-AAEG 2 7 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 33002 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-ALB RNA45S5 chrUn_gl000220 116454 + ALB chr4 74283983 + Exonic hg19 LIHC TCGA-RC-A7SF-01A 3 45 Out-of-frame Inter-chr q13.3 33003 ChimerSeq STARFusion TCGA_RNA-Seq DICER1-EIF5 DICER1 chr14 95623567 - EIF5 chr14 103803453 + Exonic hg19 LIHC TCGA-RC-A7SF-01A 4 4 5'UTR-CDS Intra-chr q32.13 Oncogene Tumor suppressor gene q32.32 Seq+ 33004 ChimerSeq STARFusion TCGA_RNA-Seq ACP2-NR1H3 ACP2 chr11 47264274 - NR1H3 chr11 47282792 + Exonic hg19 LIHC TCGA-BC-A10S-01A 2 0 In-Frame Intra-chr p11.2 p11.2 Transcription factor 33005 ChimerSeq STARFusion TCGA_RNA-Seq ZNF557-MBD3L2 ZNF557 chr19 7070664 + MBD3L2 chr19 7051052 + Exonic hg19 LIHC TCGA-DD-A118-01A 2 13 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.2 Seq+ 33006 ChimerSeq STARFusion TCGA_RNA-Seq SHC1-NUP210L SHC1 chr1 154942508 - NUP210L chr1 154072619 - Exonic hg19 LIHC TCGA-DD-A118-01A 2 12 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 33007 ChimerSeq STARFusion TCGA_RNA-Seq POC1A-TWF2 POC1A chr3 52156395 - TWF2 chr3 52265011 - Exonic hg19 LIHC TCGA-DD-A118-01A 3 3 In-Frame Intra-chr p21.2 p21.2 Seq+ 33008 ChimerSeq STARFusion TCGA_RNA-Seq FTL-APOA1 FTL chr19 49469085 + APOA1 chr11 116706692 - Exonic hg19 LIHC TCGA-EP-A2KB-01A 3 18 Out-of-frame Inter-chr q13.33 q23.3 33009 ChimerSeq STARFusion TCGA_RNA-Seq VTN-KNG1 VTN chr17 26695542 - KNG1 chr3 186459311 + Exonic hg19 LIHC TCGA-EP-A2KB-01A 2 2 Out-of-frame Inter-chr q11.2 q27.3 33010 ChimerSeq STARFusion TCGA_RNA-Seq CYP4F3-PTMS CYP4F3 chr19 15752423 + PTMS chr12 6878769 + Exonic hg19 LIHC TCGA-EP-A2KB-01A 2 1 In-Frame Inter-chr p13.12 p13.31 33011 ChimerSeq STARFusion TCGA_RNA-Seq ALB-EXOSC9 ALB chr4 74270123 + EXOSC9 chr4 122737927 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 792 3605 Out-of-frame Intra-chr q13.3 q27 Seq+ 33012 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0319L-PSMB2 KIAA0319L chr1 36019951 - PSMB2 chr1 36102033 - Exonic hg19 LIHC TCGA-XR-A8TG-01A 61 186 In-Frame Intra-chr p34.3 p34.3 Seq+ 33013 ChimerSeq STARFusion TCGA_RNA-Seq KPNA1-PARP9 KPNA1 chr3 122170381 - PARP9 chr3 122255189 - Exonic hg19 LIHC TCGA-XR-A8TG-01A 9 60 In-Frame Intra-chr q21.1 q21.1 33014 ChimerSeq STARFusion TCGA_RNA-Seq TUFT1-SCNM1 TUFT1 chr1 151512902 + SCNM1 chr1 151138947 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 11 45 In-Frame Intra-chr q21.3 q21.3 Seq+ 33015 ChimerSeq STARFusion TCGA_RNA-Seq PTPN1-LOC284751 PTPN1 chr20 49127127 + LOC284751 chr20 48914693 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 8 53 CDS-5'UTR Intra-chr q13.13 Tumor suppressor gene 33016 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-RPL23A TAOK1 chr17 27718042 + RPL23A chr17 27047725 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 15 22 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 33017 ChimerSeq STARFusion TCGA_RNA-Seq PTPN1-LOC284751 PTPN1 chr20 49127127 + LOC284751 chr20 48928342 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 7 53 CDS-5'UTR Intra-chr q13.13 Tumor suppressor gene 33018 ChimerSeq STARFusion TCGA_RNA-Seq DIAPH2-NRP2 DIAPH2 chrX 95940189 + NRP2 chr2 206656959 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 12 20 Out-of-frame Inter-chr q21.33 q33.3 Seq+ 33019 ChimerSeq STARFusion TCGA_RNA-Seq HSPA9-DDX19A HSPA9 chr5 137902315 - DDX19A chr16 70405275 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 3 34 Out-of-frame Inter-chr q31.2 q22.1 Seq+ 33020 ChimerSeq STARFusion TCGA_RNA-Seq SFMBT1-RFT1 SFMBT1 chr3 52977369 - RFT1 chr3 53133502 - Exonic hg19 LIHC TCGA-XR-A8TG-01A 6 14 In-Frame Intra-chr p21.1 p21.1 Seq+ 33021 ChimerSeq STARFusion TCGA_RNA-Seq UMPS-KALRN UMPS chr3 124449474 + KALRN chr3 124281690 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 4 22 In-Frame Intra-chr q21.2 q21.1 Seq+ 33022 ChimerSeq STARFusion TCGA_RNA-Seq BAZ1B-BCL7B BAZ1B chr7 72879769 - BCL7B chr7 72966572 - Exonic hg19 LIHC TCGA-XR-A8TG-01A 5 17 In-Frame Intra-chr q11.23 q11.23 Seq+ 33023 ChimerSeq STARFusion TCGA_RNA-Seq SEC24A-PHF15 SEC24A chr5 134053863 + PHF15 chr5 133914187 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 3 19 Out-of-frame Intra-chr q31.1 Seq+ 33024 ChimerSeq STARFusion TCGA_RNA-Seq PDXDC2P-WDR88 PDXDC2P chr16 70016253 - WDR88 chr19 33628583 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 3 9 3'UTR-CDS Inter-chr q22.1 q13.11 Seq+ 33025 ChimerSeq STARFusion TCGA_RNA-Seq EPAS1-SYPL2 EPAS1 chr2 46525076 + SYPL2 chr1 110009681 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 3 8 Out-of-frame Inter-chr p21 Tumor suppressor gene Transcription factor p13.3 Seq+ 33026 ChimerSeq STARFusion TCGA_RNA-Seq CORO1C-PACRG CORO1C chr12 109125205 - PACRG chr6 163735859 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 2 10 5'UTR-CDS Inter-chr q24.11 q26 Tumor suppressor gene Seq+ 33027 ChimerSeq STARFusion TCGA_RNA-Seq FAM35A-PAPSS2 FAM35A chr10 88856746 + PAPSS2 chr10 89500992 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 2 10 5'UTR-CDS Intra-chr q23.2 q23.2 Seq+ 33028 ChimerSeq STARFusion TCGA_RNA-Seq CYP3A43-ZSCAN25 CYP3A43 chr7 99425809 + ZSCAN25 chr7 99226993 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 3 4 Out-of-frame Intra-chr q22.1 q22.1 Transcription factor Seq+ 33029 ChimerSeq STARFusion TCGA_RNA-Seq LSR-GRAMD1A LSR chr19 35753595 + GRAMD1A chr19 35500023 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 2 8 Out-of-frame Intra-chr q13.12 q13.11 Seq+ 33030 ChimerSeq STARFusion TCGA_RNA-Seq GPR126-VTA1 GPR126 chr6 142630781 + VTA1 chr6 142539635 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 3 2 In-Frame Intra-chr q24.1 Seq+ 33031 ChimerSeq STARFusion TCGA_RNA-Seq POMT1-PPAPDC3 POMT1 chr9 134386854 + PPAPDC3 chr9 134183310 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 3 2 Out-of-frame Intra-chr q34.13 Seq+ 33032 ChimerSeq STARFusion TCGA_RNA-Seq MMS19-CRTAC1 MMS19 chr10 99227262 - CRTAC1 chr10 99696123 - Exonic hg19 LIHC TCGA-XR-A8TG-01A 3 1 Out-of-frame Intra-chr q24.1 q24.2 Seq+ 33033 ChimerSeq STARFusion TCGA_RNA-Seq BCAM-IGSF23 BCAM chr19 45318017 + IGSF23 chr19 45130717 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 2 4 In-Frame Intra-chr q13.32 q13.31 Seq+ 33034 ChimerSeq STARFusion TCGA_RNA-Seq CTNND1-SMTNL1 CTNND1 chr11 57577695 + SMTNL1 chr11 57311097 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 2 2 In-Frame Intra-chr q12.1 Tumor suppressor gene q12.1 33035 ChimerSeq STARFusion TCGA_RNA-Seq CTNND1-SMTNL1 CTNND1 chr11 57577695 + SMTNL1 chr11 57310114 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 2 2 CDS-5'UTR Intra-chr q12.1 Tumor suppressor gene q12.1 33036 ChimerSeq STARFusion TCGA_RNA-Seq HTRA1-ARMS2 HTRA1 chr10 124221640 + ARMS2 chr10 124216423 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 2 2 Out-of-frame Intra-chr q26.13 Tumor suppressor gene q26.13 Seq+ 33037 ChimerSeq STARFusion TCGA_RNA-Seq EIF4EBP1-GPR124 EIF4EBP1 chr8 37914778 + GPR124 chr8 37672414 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 2 1 Out-of-frame Intra-chr p11.23 33038 ChimerSeq STARFusion TCGA_RNA-Seq RHPN2-SLC7A10 RHPN2 chr19 33535155 - SLC7A10 chr19 33703908 - Exonic hg19 LIHC TCGA-DD-A4NA-01A 291 949 In-Frame Intra-chr q13.11 q13.11 Seq+ 33039 ChimerSeq STARFusion TCGA_RNA-Seq C16orf52-UQCRC2 C16orf52 chr16 22019728 + UQCRC2 chr16 21973781 + Exonic hg19 LIHC TCGA-DD-A4NA-01A 2 7 Out-of-frame Intra-chr 33040 ChimerSeq STARFusion TCGA_RNA-Seq RALGAPB-LBP RALGAPB chr20 37101712 + LBP chr20 36999924 + Exonic hg19 LIHC TCGA-DD-A4NA-01A 3 2 5'UTR-CDS Intra-chr q11.23 q11.23 Seq+ 33041 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPL-SIRT2 HNRNPL chr19 39328024 - SIRT2 chr19 39380784 - Exonic hg19 LIHC TCGA-DD-A4NA-01A 2 1 In-Frame Intra-chr Tumor suppressor gene Seq+ 33042 ChimerSeq STARFusion TCGA_RNA-Seq TIMM50-CTF1 TIMM50 chr19 39977135 + CTF1 chr16 30910736 + Exonic hg19 LIHC TCGA-DD-A113-01A 10 27 Out-of-frame Inter-chr q13.2 p11.2 Seq+ 33043 ChimerSeq STARFusion TCGA_RNA-Seq TIMM50-CTF1 TIMM50 chr19 39977135 + CTF1 chr16 30910739 + Exonic hg19 LIHC TCGA-DD-A113-01A 2 27 Out-of-frame Inter-chr q13.2 p11.2 Seq+ 33044 ChimerSeq STARFusion TCGA_RNA-Seq POU2F1-LCE2A POU2F1 chr1 167370793 + LCE2A chr1 152671358 + Exonic hg19 LIHC TCGA-DD-A113-01A 2 9 5'UTR-5'UTR Intra-chr q24.2 Transcription factor q21.3 Seq+ 33045 ChimerSeq STARFusion TCGA_RNA-Seq HSPD1-ALB HSPD1 chr2 198362085 - ALB chr4 74279217 + Exonic hg19 LIHC TCGA-DD-A113-01A 3 2 Out-of-frame Inter-chr q33.1 Tumor suppressor gene q13.3 33046 ChimerSeq STARFusion TCGA_RNA-Seq THOP1-FTCD THOP1 chr19 2799789 + FTCD chr21 47557248 - Exonic hg19 LIHC TCGA-DD-A3A8-01A 2 1 Out-of-frame Inter-chr p13.3 Seq+ 33047 ChimerSeq STARFusion TCGA_RNA-Seq ADAR-KRTCAP2 ADAR chr1 154580468 - KRTCAP2 chr1 155142333 - Exonic hg19 LIHC TCGA-RC-A6M4-01A 101 266 Out-of-frame Intra-chr q21.3 q22 Seq+ 33048 ChimerSeq STARFusion TCGA_RNA-Seq HABP2-LAPTM4B HABP2 chr10 115312949 + LAPTM4B chr8 98817581 + Exonic hg19 LIHC TCGA-RC-A6M4-01A 60 419 In-Frame Inter-chr q25.3 q22.1 Seq+ 33049 ChimerSeq STARFusion TCGA_RNA-Seq ADAR-KRTCAP2 ADAR chr1 154600331 - KRTCAP2 chr1 155142333 - Exonic hg19 LIHC TCGA-RC-A6M4-01A 42 266 5'UTR-CDS Intra-chr q21.3 q22 Seq+ 33050 ChimerSeq STARFusion TCGA_RNA-Seq USP39-VAMP8 USP39 chr2 85852814 + VAMP8 chr2 85808699 + Exonic hg19 LIHC TCGA-RC-A6M4-01A 48 113 In-Frame Intra-chr p11.2 p11.2 Seq+ 33051 ChimerSeq STARFusion TCGA_RNA-Seq CYP4F12-PTGER1 CYP4F12 chr19 15789215 + PTGER1 chr19 14585149 - Exonic hg19 LIHC TCGA-RC-A6M4-01A 9 175 CDS-5'UTR Intra-chr p13.12 p13.12 Seq+ 33052 ChimerSeq STARFusion TCGA_RNA-Seq FHIT-TKT FHIT chr3 60807613 - TKT chr3 53276258 - Exonic hg19 LIHC TCGA-RC-A6M4-01A 4 4 5'UTR-CDS Intra-chr p14.2 Tumor suppressor gene p21.1 Tumor suppressor gene Seq+ 33053 ChimerSeq STARFusion TCGA_RNA-Seq PTPRG-FHIT PTPRG chr3 61734656 + FHIT chr3 60807705 - Exonic hg19 LIHC TCGA-RC-A6M4-01A 2 6 CDS-5'UTR Intra-chr p14.2 p14.2 Tumor suppressor gene Seq+ 33054 ChimerSeq STARFusion TCGA_RNA-Seq C3-SHANK3 C3 chr19 6717992 - SHANK3 chr22 51143493 + Exonic hg19 LIHC TCGA-BC-A112-01A 51 386 Out-of-frame Inter-chr p13.3 Seq+ 33055 ChimerSeq STARFusion TCGA_RNA-Seq UIMC1-MXD3 UIMC1 chr5 176397743 - MXD3 chr5 176734965 - Exonic hg19 LIHC TCGA-BC-A112-01A 23 39 In-Frame Intra-chr q35.2 Tumor suppressor gene q35.3 Transcription factor Seq+ 33056 ChimerSeq STARFusion TCGA_RNA-Seq PSMB2-DENND6B PSMB2 chr1 36096875 - DENND6B chr22 50750846 - Exonic hg19 LIHC TCGA-BC-A112-01A 17 61 Out-of-frame Inter-chr p34.3 q13.33 Seq+ 33057 ChimerSeq STARFusion TCGA_RNA-Seq KIF20B-LIPJ KIF20B chr10 91505716 + LIPJ chr10 90362333 + Exonic hg19 LIHC TCGA-BC-A112-01A 10 6 Out-of-frame Intra-chr q23.31 q23.31 Seq+ 33058 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-C11orf80 KDM2A chr11 66949363 + C11orf80 chr11 66526514 + Exonic hg19 LIHC TCGA-BC-A112-01A 2 24 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 33059 ChimerSeq STARFusion TCGA_RNA-Seq PCCA-ZIC2 PCCA chr13 100861717 + ZIC2 chr13 100637200 + Exonic hg19 LIHC TCGA-BC-A112-01A 2 3 Out-of-frame Intra-chr q32.3 q32.3 Transcription factor Seq+ 33060 ChimerSeq STARFusion TCGA_RNA-Seq CCND3-USP49 CCND3 chr6 42016239 - USP49 chr6 41774749 - Exonic hg19 LIHC TCGA-BC-A112-01A 2 0 5'UTR-5'UTR Intra-chr p21.1 p21.1 33061 ChimerSeq STARFusion TCGA_RNA-Seq ITGA5-GTSF1 ITGA5 chr12 54801433 - GTSF1 chr12 54857081 - Exonic hg19 LIHC TCGA-BC-A217-01A 88 336 In-Frame Intra-chr q13.13 Tumor suppressor gene q13.13 Seq+ 33062 ChimerSeq STARFusion TCGA_RNA-Seq ITGA5-GTSF1 ITGA5 chr12 54801433 - GTSF1 chr12 54858951 - Exonic hg19 LIHC TCGA-BC-A217-01A 43 336 Out-of-frame Intra-chr q13.13 Tumor suppressor gene q13.13 Seq+ 33063 ChimerSeq STARFusion TCGA_RNA-Seq WDR37-AHNAK WDR37 chr10 1130478 + AHNAK chr11 62259303 - Exonic hg19 LIHC TCGA-BC-A217-01A 28 119 Out-of-frame Inter-chr p15.3 q12.3 Tumor suppressor gene Seq+ 33064 ChimerSeq STARFusion TCGA_RNA-Seq CARD10-LGALS2 CARD10 chr22 37911980 - LGALS2 chr22 37967938 - Exonic hg19 LIHC TCGA-BC-A217-01A 33 94 In-Frame Intra-chr q13.1 q13.1 Seq+ 33065 ChimerSeq STARFusion TCGA_RNA-Seq PVR-IGSF23 PVR chr19 45157286 + IGSF23 chr19 45127004 + Exonic hg19 LIHC TCGA-BC-A217-01A 14 62 In-Frame Intra-chr q13.31 q13.31 Seq+ 33066 ChimerSeq STARFusion TCGA_RNA-Seq OAF-APOA5 OAF chr11 120082218 + APOA5 chr11 116662584 - Exonic hg19 LIHC TCGA-BC-A217-01A 5 84 CDS-5'UTR Intra-chr q23.3 q23.3 Seq+ 33067 ChimerSeq STARFusion TCGA_RNA-Seq OAF-APOA5 OAF chr11 120082218 + APOA5 chr11 116662608 - Exonic hg19 LIHC TCGA-BC-A217-01A 5 84 CDS-5'UTR Intra-chr q23.3 q23.3 Seq+ 33068 ChimerSeq STARFusion TCGA_RNA-Seq OAF-APOA5 OAF chr11 120082218 + APOA5 chr11 116661783 - Exonic hg19 LIHC TCGA-BC-A217-01A 3 84 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 33069 ChimerSeq STARFusion TCGA_RNA-Seq OGDHL-LOC100507412 OGDHL chr10 50959873 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LIHC TCGA-BC-A217-01A 9 44 CDS-5'UTR Inter-chr q11.23 33070 ChimerSeq STARFusion TCGA_RNA-Seq ATN1-ENO2 ATN1 chr12 7037547 + ENO2 chr12 7024985 + Exonic hg19 LIHC TCGA-BC-A217-01A 10 24 5'UTR-5'UTR Intra-chr p13.31 p13.31 Seq+ 33071 ChimerSeq STARFusion TCGA_RNA-Seq AKAP13-MYL5 AKAP13 chr15 85924029 + MYL5 chr4 675682 + Exonic hg19 LIHC TCGA-BC-A217-01A 3 38 5'UTR-CDS Inter-chr q25.3 p16.3 Seq+ 33072 ChimerSeq STARFusion TCGA_RNA-Seq ATN1-ENO2 ATN1 chr12 7037547 + ENO2 chr12 7024982 + Exonic hg19 LIHC TCGA-BC-A217-01A 6 24 5'UTR-5'UTR Intra-chr p13.31 p13.31 Seq+ 33073 ChimerSeq STARFusion TCGA_RNA-Seq OAF-ZNF259 OAF chr11 120082218 + ZNF259 chr11 116658359 - Exonic hg19 LIHC TCGA-BC-A217-01A 7 15 In-Frame Intra-chr q23.3 Seq+ 33074 ChimerSeq STARFusion TCGA_RNA-Seq PAPPA2-ASTN1 PAPPA2 chr1 176640251 + ASTN1 chr1 176863966 - Exonic hg19 LIHC TCGA-BC-A217-01A 2 18 In-Frame Intra-chr q25.2 q25.2 Seq+ 33075 ChimerSeq STARFusion TCGA_RNA-Seq FAM83G-ERCC6 FAM83G chr17 18891560 - ERCC6 chr10 50669602 - Exonic hg19 LIHC TCGA-BC-A217-01A 4 2 Out-of-frame Inter-chr p11.2 q11.23 Seq+ 33076 ChimerSeq STARFusion TCGA_RNA-Seq BUD13-APOA5 BUD13 chr11 116643538 - APOA5 chr11 116661783 - Exonic hg19 LIHC TCGA-BC-A217-01A 2 5 In-Frame Intra-chr q23.3 q23.3 Seq+ 33077 ChimerSeq STARFusion TCGA_RNA-Seq MAST2-TM4SF1 MAST2 chr1 46295253 + TM4SF1 chr3 149093556 - Exonic hg19 LIHC TCGA-BC-A217-01A 2 4 In-Frame Inter-chr p34.1 AGC:MAST q25.1 Seq+ 33078 ChimerSeq STARFusion TCGA_RNA-Seq MTMR12-SPEF2 MTMR12 chr5 32268807 - SPEF2 chr5 35628562 + Exonic hg19 LIHC TCGA-CC-5264-01A 12 29 In-Frame Intra-chr p13.3 p13.2 Seq+ 33079 ChimerSeq STARFusion TCGA_RNA-Seq BBX-LINC00636 BBX chr3 107364756 + LINC00636 chr3 107642478 + Exonic hg19 LIHC TCGA-CC-5264-01A 5 26 Out-of-frame Intra-chr q13.12 Transcription factor q13.12 33080 ChimerSeq STARFusion TCGA_RNA-Seq SUV420H1-CPSF7 SUV420H1 chr11 67947599 - CPSF7 chr11 61172176 - Exonic hg19 LIHC TCGA-CC-5264-01A 3 28 CDS-3'UTR Intra-chr q12.2 Seq+ 33081 ChimerSeq STARFusion TCGA_RNA-Seq TRIO-ZNF131 TRIO chr5 14143991 + ZNF131 chr5 43161351 + Exonic hg19 LIHC TCGA-CC-5264-01A 3 7 Out-of-frame Intra-chr p15.2 p12 Transcription factor Seq+ 33082 ChimerSeq STARFusion TCGA_RNA-Seq SEPT7-KBTBD2 SEPT7 chr7 35872510 + KBTBD2 chr7 32919554 - Exonic hg19 LIHC TCGA-CC-5264-01A 2 0 CDS-5'UTR Intra-chr p14.2 p14.3 33083 ChimerSeq STARFusion TCGA_RNA-Seq CNN2-WDR18 CNN2 chr19 1026723 + WDR18 chr19 994019 + Exonic hg19 LIHC TCGA-DD-A116-01A 42 196 In-Frame Intra-chr p13.3 p13.3 Seq+ 33084 ChimerSeq STARFusion TCGA_RNA-Seq CNN2-WDR18 CNN2 chr19 1026723 + WDR18 chr19 994212 + Exonic hg19 LIHC TCGA-DD-A116-01A 11 196 In-Frame Intra-chr p13.3 p13.3 Seq+ 33085 ChimerSeq STARFusion TCGA_RNA-Seq S1PR2-FDX1L S1PR2 chr19 10334688 - FDX1L chr19 10421616 - Exonic hg19 LIHC TCGA-DD-A116-01A 3 24 Out-of-frame Intra-chr p13.2 33086 ChimerSeq STARFusion TCGA_RNA-Seq MYRIP-EIF1B MYRIP chr3 39942417 + EIF1B chr3 40351362 + Exonic hg19 LIHC TCGA-DD-A116-01A 3 0 CDS-5'UTR Intra-chr p22.1 p22.1 33087 ChimerSeq STARFusion TCGA_RNA-Seq WIBG-DGKA WIBG chr12 56321509 - DGKA chr12 56330207 + Exonic hg19 LIHC TCGA-CC-A7IK-01A 14 20 CDS-5'UTR Intra-chr 12q13.2 q13.2 33088 ChimerSeq STARFusion TCGA_RNA-Seq ATXN1-DTNBP1 ATXN1 chr6 16486203 - DTNBP1 chr6 15533626 - Exonic hg19 LIHC TCGA-HP-A5N0-01A 18 44 5'UTR-CDS Intra-chr p22.3 p22.3 Seq+ 33089 ChimerSeq STARFusion TCGA_RNA-Seq POP1-TATDN1 POP1 chr8 99146887 + TATDN1 chr8 125500937 - Exonic hg19 LIHC TCGA-HP-A5N0-01A 3 34 Out-of-frame Intra-chr q22.2 q24.13 Seq+ 33090 ChimerSeq STARFusion TCGA_RNA-Seq AMBP-KIF12 AMBP chr9 116835205 - KIF12 chr9 116848504 - Exonic hg19 LIHC TCGA-2Y-A9GZ 86 238 CDS-3'UTR Intra-chr q32 q32 33091 ChimerSeq STARFusion TCGA_RNA-Seq AMBP-KIF12 AMBP chr9 116835205 - KIF12 chr9 116855184 - Exonic hg19 LIHC TCGA-2Y-A9GZ 33 238 Out-of-frame Intra-chr q32 q32 33092 ChimerSeq STARFusion TCGA_RNA-Seq RXRA-WDR5 RXRA chr9 137218505 + WDR5 chr9 137017105 + Exonic hg19 LIHC TCGA-2Y-A9GZ 29 13 Out-of-frame Intra-chr q34.2 Transcription factor q34.2 Seq+ 33093 ChimerSeq STARFusion TCGA_RNA-Seq ESRRA-KCNK4 ESRRA chr11 64074976 + KCNK4 chr11 64064350 + Exonic hg19 LIHC TCGA-2Y-A9GZ 12 50 Out-of-frame Intra-chr q13.1 Transcription factor q13.1 Seq+ 33094 ChimerSeq STARFusion TCGA_RNA-Seq SMLR1-PHF12 SMLR1 chr6 131156174 + PHF12 chr17 27235899 - Exonic hg19 LIHC TCGA-2Y-A9GZ 12 18 Out-of-frame Inter-chr q23.1 q11.2 Seq+ 33095 ChimerSeq STARFusion TCGA_RNA-Seq ZNF7-KALRN ZNF7 chr8 146054989 + KALRN chr3 124113982 + Exonic hg19 LIHC TCGA-2Y-A9GZ 7 10 Out-of-frame Inter-chr q24.3 Transcription factor q21.1 Seq+ 33096 ChimerSeq STARFusion TCGA_RNA-Seq FGFR2-SMN1 FGFR2 chr10 123243212 - SMN1 chr5 70234666 + Exonic hg19 LIHC TCGA-DD-AA3A-01A 53 117 In-Frame Inter-chr q26.13 TK:FGFR Oncogene Seq+ 33097 ChimerSeq STARFusion TCGA_RNA-Seq FGFR2-SMN2 FGFR2 chr10 123243212 - SMN2 chr5 70234666 + Exonic hg19 LIHC TCGA-DD-AA3A-01A 53 117 In-Frame Inter-chr q26.13 TK:FGFR Oncogene 33098 ChimerSeq STARFusion TCGA_RNA-Seq EPHA6-TSC22D2 EPHA6 chr3 96585733 + TSC22D2 chr3 150174863 + Exonic hg19 LIHC TCGA-DD-AA3A-01A 5 21 Out-of-frame Intra-chr q11.2 q25.1 Seq+ 33099 ChimerSeq STARFusion TCGA_RNA-Seq WASF3-ATP8A2 WASF3 chr13 27131956 + ATP8A2 chr13 26411301 + Exonic hg19 LIHC TCGA-DD-AA3A-01A 7 5 5'UTR-CDS Intra-chr q12.13 q12.13 Seq+ 33100 ChimerSeq STARFusion TCGA_RNA-Seq RNF6-NAALADL2 RNF6 chr13 26792648 - NAALADL2 chr3 175455094 + Exonic hg19 LIHC TCGA-DD-AA3A-01A 2 2 Out-of-frame Inter-chr q12.13 q26.31 Seq+ 33101 ChimerSeq STARFusion TCGA_RNA-Seq ZHX3-CHD6 ZHX3 chr20 39830697 - CHD6 chr20 40034129 - Exonic hg19 LIHC TCGA-DD-A73B-01A 3 21 Out-of-frame Intra-chr q12 Transcription factor q12 Seq+ 33102 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D15-RAB21 TBC1D15 chr12 72274387 + RAB21 chr12 72175811 + Exonic hg19 LIHC TCGA-ED-A5KG-01A 3 4 In-Frame Intra-chr q21.1 q21.1 33103 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB1-PRKACA DNAJB1 chr19 14628951 - PRKACA chr19 14218221 - Exonic hg19 LIHC TCGA-MR-A8JO-01A 23 167 In-Frame Intra-chr p13.12 Tumor suppressor gene p13.12 KB Pub Seq+ 33104 ChimerSeq STARFusion TCGA_RNA-Seq MRC1-ALOX5 MRC1 chr10 18183241 + ALOX5 chr10 45877931 + Exonic hg19 LIHC TCGA-MR-A8JO-01A 27 72 3'UTR-CDS Intra-chr p12.33 Seq+ 33105 ChimerSeq STARFusion TCGA_RNA-Seq TOP3A-ANAPC16 TOP3A chr17 18186012 - ANAPC16 chr10 73990124 + Exonic hg19 LIHC TCGA-MR-A8JO-01A 4 7 Out-of-frame Inter-chr q22.1 Seq+ 33106 ChimerSeq STARFusion TCGA_RNA-Seq CPS1-MAP2 CPS1 chr2 211454958 + MAP2 chr2 210588319 + Exonic hg19 LIHC TCGA-MR-A8JO-01A 2 10 In-Frame Intra-chr q34 q34 Seq+ 33107 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN4-PNPLA2 TSPAN4 chr11 865787 + PNPLA2 chr11 824800 + Exonic hg19 LIHC TCGA-G3-AAUZ-01A 20 242 Out-of-frame Intra-chr p15.5 p15.5 33108 ChimerSeq STARFusion TCGA_RNA-Seq C1S-NXPH4 C1S chr12 7168181 + NXPH4 chr12 57618661 + Exonic hg19 LIHC TCGA-G3-AAUZ-01A 24 40 5'UTR-CDS Intra-chr p13.31 q13.3 Seq+ 33109 ChimerSeq STARFusion TCGA_RNA-Seq FBXO46-SYMPK FBXO46 chr19 46234107 - SYMPK chr19 46321404 - Exonic hg19 LIHC TCGA-G3-AAUZ-01A 22 21 5'UTR-CDS Intra-chr q13.32 q13.32 Seq+ 33110 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-PHF12 TMPRSS2 chr21 42860321 - PHF12 chr17 27235899 - Exonic hg19 LIHC TCGA-G3-AAUZ-01A 2 5 In-Frame Inter-chr q22.3 q11.2 Seq+ 33111 ChimerSeq STARFusion TCGA_RNA-Seq ST7-COG5 ST7 chr7 116593745 + COG5 chr7 107053077 - Exonic hg19 LIHC TCGA-RC-A6M6-01A 70 349 In-Frame Intra-chr q31.2 Tumor suppressor gene Seq+ 33112 ChimerSeq STARFusion TCGA_RNA-Seq NRCAM-CFTR NRCAM chr7 108096687 - CFTR chr7 117305513 + Exonic hg19 LIHC TCGA-RC-A6M6-01A 8 34 5'UTR-CDS Intra-chr q31.1 Tumor suppressor gene q31.2 Tumor suppressor gene Seq+ 33113 ChimerSeq STARFusion TCGA_RNA-Seq THRAP3-MAP7D1 THRAP3 chr1 36748301 + MAP7D1 chr1 36636572 + Exonic hg19 LIHC TCGA-RC-A6M6-01A 9 10 Out-of-frame Intra-chr p34.3 p34.3 Seq+ 33114 ChimerSeq STARFusion TCGA_RNA-Seq PNPLA8-CFTR PNPLA8 chr7 108128203 - CFTR chr7 117282492 + Exonic hg19 LIHC TCGA-RC-A6M6-01A 7 17 In-Frame Intra-chr q31.1 q31.2 Tumor suppressor gene Seq+ 33115 ChimerSeq STARFusion TCGA_RNA-Seq ACTR3C-GIMAP2 ACTR3C chr7 149990401 - GIMAP2 chr7 150384140 + Exonic hg19 LIHC TCGA-RC-A6M6-01A 5 9 CDS-5'UTR Intra-chr q36.1 q36.1 Seq+ 33116 ChimerSeq STARFusion TCGA_RNA-Seq OXR1-MET OXR1 chr8 107738537 + MET chr7 116411552 + Exonic hg19 LIHC TCGA-RC-A6M6-01A 2 14 In-Frame Inter-chr q23.1 q31.2 TK:Met Oncogene Seq+ 33117 ChimerSeq STARFusion TCGA_RNA-Seq OXR1-MET OXR1 chr8 107726213 + MET chr7 116411552 + Exonic hg19 LIHC TCGA-RC-A6M6-01A 2 14 In-Frame Inter-chr q23.1 q31.2 TK:Met Oncogene Seq+ 33118 ChimerSeq STARFusion TCGA_RNA-Seq H19-CTIF H19 chr11 2017102 - CTIF chr18 46146087 + Exonic hg19 LIHC TCGA-RC-A6M6-01A 3 1 Out-of-frame Inter-chr p15.5 Tumor suppressor gene 33119 ChimerSeq STARFusion TCGA_RNA-Seq LOC100130000-LINC00623 LOC100130000 chr1 143687285 + LINC00623 chr1 144301537 - Exonic hg19 LIHC TCGA-G3-AAV4-01A 3 3 Out-of-frame Intra-chr p11.2 33120 ChimerSeq STARFusion TCGA_RNA-Seq FGFR2-BICC1 FGFR2 chr10 123243212 - BICC1 chr10 60461834 + Exonic hg19 LIHC TCGA-ED-A7PX-01A 62 109 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q21.1 Seq+ 33121 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D2B-CIB2 TBC1D2B chr15 78346376 - CIB2 chr15 78403618 - Exonic hg19 LIHC TCGA-ED-A7PX-01A 25 76 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 33122 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D2B-CIB2 TBC1D2B chr15 78346376 - CIB2 chr15 78401724 - Exonic hg19 LIHC TCGA-ED-A7PX-01A 3 76 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 33123 ChimerSeq STARFusion TCGA_RNA-Seq SMYD2-PROX1 SMYD2 chr1 214501067 + PROX1 chr1 214208992 + Exonic hg19 LIHC TCGA-ED-A7PX-01A 9 26 In-Frame Intra-chr q32.3 q32.3 Tumor suppressor gene Transcription factor Seq+ 33124 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-RYR1 ACTN4 chr19 39138547 + RYR1 chr19 39051753 + Exonic hg19 LIHC TCGA-ED-A7PX-01A 7 8 In-Frame Intra-chr q13.2 Seq+ 33125 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-MRC2 TANC2 chr17 61086987 + MRC2 chr17 60741909 + Exonic hg19 LIHC TCGA-ED-A7PX-01A 5 7 In-Frame Intra-chr q23.2 q23.2 Seq+ 33126 ChimerSeq STARFusion TCGA_RNA-Seq KBTBD2-NT5C3 KBTBD2 chr7 32931148 - NT5C3 chr7 33075600 - Exonic hg19 LIHC TCGA-ED-A7PX-01A 2 2 5'UTR-5'UTR Intra-chr p14.3 Seq+ 33127 ChimerSeq STARFusion TCGA_RNA-Seq CYP2E1-FTCD CYP2E1 chr10 135341076 + FTCD chr21 47558837 - Exonic hg19 LIHC TCGA-ES-A2HS-01A 2 3 In-Frame Inter-chr q26.3 33128 ChimerSeq STARFusion TCGA_RNA-Seq PIK3CB-DDX11L1 PIK3CB chr3 138515305 - DDX11L1 chr1 12010 + Exonic hg19 LIHC TCGA-3K-AAZ8 7 25 Out-of-frame Inter-chr q22.3 Oncogene p36.33 33129 ChimerSeq STARFusion TCGA_RNA-Seq IL13RA1-DOCK11 IL13RA1 chrX 117900939 + DOCK11 chrX 117796649 + Exonic hg19 LIHC TCGA-NI-A4U2-01A 13 54 In-Frame Intra-chr q24 q24 Seq+ 33130 ChimerSeq STARFusion TCGA_RNA-Seq FBXW11-NUP210L FBXW11 chr5 171433462 - NUP210L chr1 154000073 - Exonic hg19 LIHC TCGA-NI-A4U2-01A 2 18 In-Frame Inter-chr q35.1 q21.3 Seq+ 33131 ChimerSeq STARFusion TCGA_RNA-Seq STRN-SULT6B1 STRN chr2 37126666 - SULT6B1 chr2 37415690 - Exonic hg19 LIHC TCGA-NI-A4U2-01A 3 6 CDS-5'UTR Intra-chr p22.2 p22.2 Seq+ 33132 ChimerSeq STARFusion TCGA_RNA-Seq MORC2-APOC3 MORC2 chr22 31328637 - APOC3 chr11 116703480 + Exonic hg19 LIHC TCGA-NI-A4U2-01A 4 0 In-Frame Inter-chr q12.2 q23.3 33133 ChimerSeq STARFusion TCGA_RNA-Seq B2M-SERPINA1 B2M chr15 45010242 + SERPINA1 chr14 94849304 - Exonic hg19 LIHC TCGA-NI-A4U2-01A 3 3 Out-of-frame Inter-chr Oncogene q32.13 33134 ChimerSeq STARFusion TCGA_RNA-Seq ATG2A-ALB ATG2A chr11 64662303 - ALB chr4 74276027 + Exonic hg19 LIHC TCGA-NI-A4U2-01A 3 2 Out-of-frame Inter-chr q13.1 q13.3 33135 ChimerSeq STARFusion TCGA_RNA-Seq EPHX1-MTX3 EPHX1 chr1 226027047 + MTX3 chr5 79273294 - Exonic hg19 LIHC TCGA-NI-A4U2-01A 3 1 CDS-3'UTR Inter-chr q42.12 q14.1 33136 ChimerSeq STARFusion TCGA_RNA-Seq SUPT20H-RPL18 SUPT20H chr13 37633722 - RPL18 chr19 49121132 - Exonic hg19 LIHC TCGA-NI-A4U2-01A 3 0 Out-of-frame Inter-chr q13.3 q13.33 33137 ChimerSeq STARFusion TCGA_RNA-Seq ALB-ACOX1 ALB chr4 74272478 + ACOX1 chr17 73949701 - Exonic hg19 LIHC TCGA-NI-A4U2-01A 2 2 In-Frame Inter-chr q13.3 q25.1 33138 ChimerSeq STARFusion TCGA_RNA-Seq FTL-AGXT FTL chr19 49468866 + AGXT chr2 241816954 + Exonic hg19 LIHC TCGA-NI-A4U2-01A 2 2 In-Frame Inter-chr q13.33 q37.3 33139 ChimerSeq STARFusion TCGA_RNA-Seq ZNF680-CDO1 ZNF680 chr7 64004085 - CDO1 chr5 115148955 - Exonic hg19 LIHC TCGA-NI-A4U2-01A 2 1 Out-of-frame Inter-chr q11.21 Transcription factor q22.3 Tumor suppressor gene 33140 ChimerSeq STARFusion TCGA_RNA-Seq NMNAT3-CCDC50 NMNAT3 chr3 139346458 - CCDC50 chr3 191074877 + Exonic hg19 LIHC TCGA-BC-A10W-01A 5 9 In-Frame Intra-chr q23 q28 Seq+ 33141 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1801539 + TACC3 chr4 1746245 + Exonic hg19 LIHC TCGA-DD-A1EK-01A 943 2363 Out-of-frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 33142 ChimerSeq STARFusion TCGA_RNA-Seq PPFIBP1-C12orf70 PPFIBP1 chr12 27731172 + C12orf70 chr12 27654856 + Exonic hg19 LIHC TCGA-DD-A1EK-01A 5 75 5'UTR-CDS Intra-chr p11.23 Seq+ 33143 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L3-C1QTNF3 SIPA1L3 chr19 38397998 + C1QTNF3 chr5 34035863 - Exonic hg19 LIHC TCGA-DD-A1EK-01A 3 9 5'UTR-CDS Inter-chr q13.13 p13.2 Seq+ 33144 ChimerSeq STARFusion TCGA_RNA-Seq PTPN23-KLHL18 PTPN23 chr3 47422670 + KLHL18 chr3 47371441 + Exonic hg19 LIHC TCGA-DD-A1EK-01A 3 8 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 33145 ChimerSeq STARFusion TCGA_RNA-Seq ARNTL2-PPFIBP1 ARNTL2 chr12 27521345 + PPFIBP1 chr12 27731085 + Exonic hg19 LIHC TCGA-K7-AAU7-01A 21 38 CDS-5'UTR Intra-chr p11.23 Transcription factor p11.23 Seq+ 33146 ChimerSeq STARFusion TCGA_RNA-Seq BCAT1-STK38L BCAT1 chr12 25101861 - STK38L chr12 27450643 + Exonic hg19 LIHC TCGA-K7-AAU7-01A 3 1 CDS-5'UTR Intra-chr p12.1 p11.23 33147 ChimerSeq STARFusion TCGA_RNA-Seq ALB-CYP2B7P1 ALB chr4 74282070 + CYP2B7P1 chr19 41454958 + Exonic hg19 LIHC TCGA-5R-AAAM 549 2998 CDS-5'UTR Inter-chr q13.3 33148 ChimerSeq STARFusion TCGA_RNA-Seq TRIT1-ADH1C TRIT1 chr1 40348990 - ADH1C chr4 100269003 - Exonic hg19 LIHC TCGA-PD-A5DF-01A 25 115 In-Frame Inter-chr p34.2 Tumor suppressor gene q23 Seq+ 33149 ChimerSeq STARFusion TCGA_RNA-Seq TRIT1-ADH1C TRIT1 chr1 40348990 - ADH1C chr4 100268301 - Exonic hg19 LIHC TCGA-PD-A5DF-01A 17 86 In-Frame Inter-chr p34.2 Tumor suppressor gene q23 Seq+ 33150 ChimerSeq STARFusion TCGA_RNA-Seq CLIC4-ARFGAP3 CLIC4 chr1 25072116 + ARFGAP3 chr22 43243638 - Exonic hg19 LIHC TCGA-PD-A5DF-01A 14 41 In-Frame Inter-chr p36.11 q13.2 Seq+ 33151 ChimerSeq STARFusion TCGA_RNA-Seq LPIN2-MYOM1 LPIN2 chr18 2982666 - MYOM1 chr18 3102628 - Exonic hg19 LIHC TCGA-PD-A5DF-01A 10 31 5'UTR-CDS Intra-chr p11.31 p11.31 Seq+ 33152 ChimerSeq STARFusion TCGA_RNA-Seq PCCA-ZIC2 PCCA chr13 100755214 + ZIC2 chr13 100637200 + Exonic hg19 LIHC TCGA-PD-A5DF-01A 7 35 Out-of-frame Intra-chr q32.3 q32.3 Transcription factor Seq+ 33153 ChimerSeq STARFusion TCGA_RNA-Seq LPIN2-MYOM1 LPIN2 chr18 3013085 - MYOM1 chr18 3102628 - Exonic hg19 LIHC TCGA-PD-A5DF-01A 4 31 5'UTR-CDS Intra-chr p11.31 p11.31 Seq+ 33154 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1109-CCNA2 KIAA1109 chr4 123075267 + CCNA2 chr4 122742246 - Exonic hg19 LIHC TCGA-PD-A5DF-01A 5 26 5'UTR-CDS Intra-chr q27 q27 Seq+ 33155 ChimerSeq STARFusion TCGA_RNA-Seq CLIC4-PACSIN2 CLIC4 chr1 25072116 + PACSIN2 chr22 43243638 - Exonic hg19 LIHC TCGA-PD-A5DF-01A 8 12 CDS-3'UTR Inter-chr p36.11 q13.2 Seq+ 33156 ChimerSeq STARFusion TCGA_RNA-Seq C16orf70-GNAO1 C16orf70 chr16 67159945 + GNAO1 chr16 56362543 + Exonic hg19 LIHC TCGA-PD-A5DF-01A 3 18 In-Frame Intra-chr q22.1 q13 Seq+ 33157 ChimerSeq STARFusion TCGA_RNA-Seq BCL2L2-C14orf164 BCL2L2 chr14 23777408 + C14orf164 chr14 23739809 + Exonic hg19 LIHC TCGA-PD-A5DF-01A 3 14 Out-of-frame Intra-chr q11.2 Oncogene 33158 ChimerSeq STARFusion TCGA_RNA-Seq RAI14-SCP2 RAI14 chr5 34656580 + SCP2 chr1 53440441 + Exonic hg19 LIHC TCGA-PD-A5DF-01A 2 16 5'UTR-CDS Inter-chr p13.2 p32.3 Seq+ 33159 ChimerSeq STARFusion TCGA_RNA-Seq LOC284889-APOA2 LOC284889 chr22 24236621 - APOA2 chr1 161193407 - Exonic hg19 LIHC TCGA-UB-A7ME-01A 3 1 Out-of-frame Inter-chr q23.3 33160 ChimerSeq STARFusion TCGA_RNA-Seq CPQ-SDC2 CPQ chr8 97657630 + SDC2 chr8 97605708 + Exonic hg19 LIHC TCGA-XR-A8TC-01A 2 2 5'UTR-CDS Intra-chr q22.1 q22.1 33161 ChimerSeq STARFusion TCGA_RNA-Seq LBP-BPI LBP chr20 36983809 + BPI chr20 36952272 + Exonic hg19 LIHC TCGA-BC-A8YO-01A 290 768 In-Frame Intra-chr q11.23 q11.23 Seq+ 33162 ChimerSeq STARFusion TCGA_RNA-Seq DFNB31-AMBP DFNB31 chr9 117228547 - AMBP chr9 116839020 - Exonic hg19 LIHC TCGA-BC-A8YO-01A 92 272 In-Frame Intra-chr q32 Seq+ 33163 ChimerSeq STARFusion TCGA_RNA-Seq IRF9-RNF31 IRF9 chr14 24631533 + RNF31 chr14 24629448 + Exonic hg19 LIHC TCGA-BC-A8YO-01A 81 263 Out-of-frame Intra-chr q12 Transcription factor q12 Seq+ 33164 ChimerSeq STARFusion TCGA_RNA-Seq GOSR1-CPD GOSR1 chr17 28811788 + CPD chr17 28788895 + Exonic hg19 LIHC TCGA-BC-A8YO-01A 19 130 In-Frame Intra-chr q11.2 q11.2 Tumor suppressor gene Seq+ 33165 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP42-KMO ARHGAP42 chr11 100730356 + KMO chr1 241749981 + Exonic hg19 LIHC TCGA-BC-A8YO-01A 21 67 In-Frame Inter-chr q22.1 q43 Seq+ 33166 ChimerSeq STARFusion TCGA_RNA-Seq WNK1-B4GALNT3 WNK1 chr12 939326 + B4GALNT3 chr12 657397 + Exonic hg19 LIHC TCGA-BC-A8YO-01A 23 49 In-Frame Intra-chr p13.33 p13.33 KB Pub Seq+ 33167 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A44-AKAP2 SLC25A44 chr1 156164038 + AKAP2 chr9 112918599 + Exonic hg19 LIHC TCGA-BC-A8YO-01A 4 74 5'UTR-CDS Inter-chr q22 q31.3 Seq+ 33168 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A44-AKAP2 SLC25A44 chr1 156164038 + AKAP2 chr9 112930679 + Exonic hg19 LIHC TCGA-BC-A8YO-01A 3 74 5'UTR-CDS Inter-chr q22 q31.3 Seq+ 33169 ChimerSeq STARFusion TCGA_RNA-Seq RBM25-DCAF4 RBM25 chr14 73572746 + DCAF4 chr14 73425182 + Exonic hg19 LIHC TCGA-BC-A8YO-01A 12 21 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 33170 ChimerSeq STARFusion TCGA_RNA-Seq NOP2-PIANP NOP2 chr12 6676982 - PIANP chr12 6807270 - Exonic hg19 LIHC TCGA-BC-A8YO-01A 4 48 Out-of-frame Intra-chr p13.31 p13.31 Seq+ 33171 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L2-TMEM194B NFE2L2 chr2 178129260 - TMEM194B chr2 191390104 - Exonic hg19 LIHC TCGA-BC-A8YO-01A 8 28 Out-of-frame Intra-chr q31.2 Oncogene Transcription factor Seq+ 33172 ChimerSeq STARFusion TCGA_RNA-Seq ATL3-RTN3 ATL3 chr11 63426233 - RTN3 chr11 63517463 + Exonic hg19 LIHC TCGA-BC-A8YO-01A 8 22 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 33173 ChimerSeq STARFusion TCGA_RNA-Seq LOC100216545-RAPGEF5 LOC100216545 chr7 104653948 - RAPGEF5 chr7 22184840 - Exonic hg19 LIHC TCGA-BC-A8YO-01A 5 33 3'UTR-CDS Intra-chr p15.3 33174 ChimerSeq STARFusion TCGA_RNA-Seq XRCC5-TMEM169 XRCC5 chr2 217012999 + TMEM169 chr2 216960561 + Exonic hg19 LIHC TCGA-BC-A8YO-01A 8 16 CDS-5'UTR Intra-chr q35 Tumor suppressor gene q35 Seq+ 33175 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT5-RNF151 B4GALT5 chr20 48314735 - RNF151 chr16 2017275 + Exonic hg19 LIHC TCGA-BC-A8YO-01A 7 18 Out-of-frame Inter-chr q13.13 p13.3 Seq+ 33176 ChimerSeq STARFusion TCGA_RNA-Seq MED13L-HRK MED13L chr12 116714865 - HRK chr12 117299271 - Exonic hg19 LIHC TCGA-BC-A8YO-01A 4 24 CDS-3'UTR Intra-chr q24.21 q24.22 Seq+ 33177 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L2-TMEM194B NFE2L2 chr2 178128131 - TMEM194B chr2 191390104 - Exonic hg19 LIHC TCGA-BC-A8YO-01A 2 28 5'UTR-CDS Intra-chr q31.2 Oncogene Transcription factor Seq+ 33178 ChimerSeq STARFusion TCGA_RNA-Seq HERPUD2-LOC100216546 HERPUD2 chr7 35707044 - LOC100216546 chr7 104623138 - Exonic hg19 LIHC TCGA-BC-A8YO-01A 5 8 CDS-3'UTR Intra-chr p14.2 33179 ChimerSeq STARFusion TCGA_RNA-Seq LPP-CLPTM1L LPP chr3 188478070 + CLPTM1L chr5 1338097 - Exonic hg19 LIHC TCGA-BC-A8YO-01A 4 2 Out-of-frame Inter-chr q27.3 Oncogene p15.33 Seq+ 33180 ChimerSeq STARFusion TCGA_RNA-Seq OIP5-GPR176 OIP5 chr15 41605471 - GPR176 chr15 40099459 - Exonic hg19 LIHC TCGA-BC-A8YO-01A 2 3 Out-of-frame Intra-chr q15.1 q15.1 Seq+ 33181 ChimerSeq STARFusion TCGA_RNA-Seq SERPIND1-MICALL1 SERPIND1 chr22 21140436 + MICALL1 chr22 38333087 + Exonic hg19 LIHC TCGA-2Y-A9HA 8 22 Out-of-frame Intra-chr q11.21 q13.1 Seq+ 33182 ChimerSeq STARFusion TCGA_RNA-Seq PAPPA2-ACBD6 PAPPA2 chr1 176740316 + ACBD6 chr1 180257652 - Exonic hg19 LIHC TCGA-2Y-A9HA 4 25 Out-of-frame Intra-chr q25.2 q25.3 Seq+ 33183 ChimerSeq STARFusion TCGA_RNA-Seq NCF2-PAPPA2 NCF2 chr1 183538277 - PAPPA2 chr1 176640106 + Exonic hg19 LIHC TCGA-2Y-A9HA 4 10 In-Frame Intra-chr q25.3 q25.2 Seq+ 33184 ChimerSeq STARFusion TCGA_RNA-Seq MTAP-FLJ35282 MTAP chr9 21818201 + FLJ35282 chr9 22823251 + Exonic hg19 LIHC TCGA-DD-A4NG-01A 15 19 CDS-5'UTR Intra-chr p21.3 Tumor suppressor gene Seq+ 33185 ChimerSeq STARFusion TCGA_RNA-Seq SATB1-GOLGA5 SATB1 chr3 18435954 - GOLGA5 chr14 93263753 + Exonic hg19 LIHC TCGA-DD-A4NG-01A 6 4 CDS-5'UTR Inter-chr p24.3 Transcription factor q32.12 Seq+ 33186 ChimerSeq STARFusion TCGA_RNA-Seq RSPO1-HP RSPO1 chr1 38077347 - HP chr16 72094730 + Exonic hg19 LIHC TCGA-DD-A4NG-01A 4 2 Out-of-frame Inter-chr p34.3 q22.2 Tumor suppressor gene 33187 ChimerSeq STARFusion TCGA_RNA-Seq PVRL2-CCL21 PVRL2 chr19 45349870 + CCL21 chr9 34709894 - Exonic hg19 LIHC TCGA-ED-A7XO-01A 14 62 In-Frame Inter-chr p13.3 Seq+ 33188 ChimerSeq STARFusion TCGA_RNA-Seq SCARB2-NIPSNAP1 SCARB2 chr4 77134580 - NIPSNAP1 chr22 29957851 - Exonic hg19 LIHC TCGA-ED-A7XO-01A 15 48 Out-of-frame Inter-chr q21.1 q12.2 Seq+ 33189 ChimerSeq STARFusion TCGA_RNA-Seq CXADR-C21orf37 CXADR chr21 18885490 + C21orf37 chr21 18821183 + Exonic hg19 LIHC TCGA-ED-A7XO-01A 6 39 CDS-5'UTR Intra-chr q21.1 33190 ChimerSeq STARFusion TCGA_RNA-Seq PC-MX2 PC chr11 66719901 - MX2 chr21 42762492 + Exonic hg19 LIHC TCGA-ED-A7XO-01A 3 35 5'UTR-CDS Inter-chr q13.2 q22.3 Seq+ 33191 ChimerSeq STARFusion TCGA_RNA-Seq PC-MX2 PC chr11 66719901 - MX2 chr21 42767514 + Exonic hg19 LIHC TCGA-ED-A7XO-01A 2 35 5'UTR-CDS Inter-chr q13.2 q22.3 Seq+ 33192 ChimerSeq STARFusion TCGA_RNA-Seq ABHD6-FLNB ABHD6 chr3 58223643 + FLNB chr3 58104599 + Exonic hg19 LIHC TCGA-ED-A7XO-01A 5 11 5'UTR-CDS Intra-chr p14.3 p14.3 Seq+ 33193 ChimerSeq STARFusion TCGA_RNA-Seq MPP5-FAM71D MPP5 chr14 67708250 + FAM71D chr14 67669811 + Exonic hg19 LIHC TCGA-ED-A7XO-01A 2 5 5'UTR-CDS Intra-chr q23.3 q23.3 KB Pub Seq+ 33194 ChimerSeq STARFusion TCGA_RNA-Seq GPLD1-FAM65B GPLD1 chr6 24486303 - FAM65B chr6 24876045 - Exonic hg19 LIHC TCGA-2Y-A9H9 20 44 CDS-5'UTR Intra-chr p22.3 Seq+ 33195 ChimerSeq STARFusion TCGA_RNA-Seq FRYL-OCIAD2 FRYL chr4 48782095 - OCIAD2 chr4 48906628 - Exonic hg19 LIHC TCGA-2Y-A9H9 4 15 5'UTR-5'UTR Intra-chr p11 p11 Seq+ 33196 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-GTF2H5 MAP4 chr3 48130263 - GTF2H5 chr6 158613009 + Exonic hg19 LIHC TCGA-BC-A69H-01A 10 78 5'UTR-CDS Inter-chr p21.31 q25.3 Seq+ 33197 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-GTF2H5 MAP4 chr3 48130263 - GTF2H5 chr6 158591502 + Exonic hg19 LIHC TCGA-BC-A69H-01A 10 78 5'UTR-5'UTR Inter-chr p21.31 q25.3 Seq+ 33198 ChimerSeq STARFusion TCGA_RNA-Seq ALB-LBR ALB chr4 74276127 + LBR chr1 225615438 - Exonic hg19 LIHC TCGA-WX-AA46 18 1 Out-of-frame Inter-chr q13.3 q42.12 33199 ChimerSeq STARFusion TCGA_RNA-Seq TARSL2-OR4F4 TARSL2 chr15 102252083 - OR4F4 chr15 102463316 - Exonic hg19 LIHC TCGA-WX-AA46 3 10 CDS-5'UTR Intra-chr q26.3 q26.3 33200 ChimerSeq STARFusion TCGA_RNA-Seq SLC12A7-SKIV2L2 SLC12A7 chr5 1057586 - SKIV2L2 chr5 54720548 + Exonic hg19 LIHC TCGA-2Y-A9H0 129 229 Out-of-frame Intra-chr p15.33 q11.2 Seq+ 33201 ChimerSeq STARFusion TCGA_RNA-Seq PHC3-SLC7A14 PHC3 chr3 169896561 - SLC7A14 chr3 170185165 - Exonic hg19 LIHC TCGA-2Y-A9H0 29 186 Out-of-frame Intra-chr q26.2 Tumor suppressor gene q26.2 Seq+ 33202 ChimerSeq STARFusion TCGA_RNA-Seq DAG1-LARS2 DAG1 chr3 49548252 + LARS2 chr3 45588843 + Exonic hg19 LIHC TCGA-2Y-A9H0 22 81 In-Frame Intra-chr p21.31 p21.31 Seq+ 33203 ChimerSeq STARFusion TCGA_RNA-Seq TRIM29-PAK1 TRIM29 chr11 120055958 - PAK1 chr11 77034405 - Exonic hg19 LIHC TCGA-2Y-A9H0 13 113 5'UTR-CDS Intra-chr q23.3 q14.1 STE:STE20 Seq+ 33204 ChimerSeq STARFusion TCGA_RNA-Seq TRIM29-PAK1 TRIM29 chr11 120055918 - PAK1 chr11 77034405 - Exonic hg19 LIHC TCGA-2Y-A9H0 11 113 5'UTR-CDS Intra-chr q23.3 q14.1 STE:STE20 Seq+ 33205 ChimerSeq STARFusion TCGA_RNA-Seq PDXDC1-GPR56 PDXDC1 chr16 15095713 + GPR56 chr16 57684165 + Exonic hg19 LIHC TCGA-2Y-A9H0 9 67 CDS-5'UTR Intra-chr p13.11 q21 Seq+ 33206 ChimerSeq STARFusion TCGA_RNA-Seq PDXDC1-GPR56 PDXDC1 chr16 15092262 + GPR56 chr16 57684165 + Exonic hg19 LIHC TCGA-2Y-A9H0 6 60 CDS-5'UTR Intra-chr p13.11 q21 Seq+ 33207 ChimerSeq STARFusion TCGA_RNA-Seq RXRA-KCNT2 RXRA chr9 137218505 + KCNT2 chr1 196461471 - Exonic hg19 LIHC TCGA-2Y-A9H0 13 9 Out-of-frame Inter-chr q34.2 Transcription factor q31.3 Seq+ 33208 ChimerSeq STARFusion TCGA_RNA-Seq RCBTB1-DOCK9 RCBTB1 chr13 50154641 - DOCK9 chr13 99460061 - Exonic hg19 LIHC TCGA-2Y-A9H0 8 10 5'UTR-CDS Intra-chr q14.2 q32.3 Seq+ 33209 ChimerSeq STARFusion TCGA_RNA-Seq CAMK2G-C10orf55 CAMK2G chr10 75601927 - C10orf55 chr10 75676399 - Exonic hg19 LIHC TCGA-2Y-A9H0 6 17 CDS-5'UTR Intra-chr q22.2 q22.2 Seq+ 33210 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-LYST EGFR chr7 55087058 + LYST chr1 235996967 - Exonic hg19 LIHC TCGA-2Y-A9H0 5 20 CDS-5'UTR Inter-chr p11.2 TK:EGFR Oncogene q42.3 Seq+ 33211 ChimerSeq STARFusion TCGA_RNA-Seq ARSB-DMGDH ARSB chr5 78251118 - DMGDH chr5 78322404 - Exonic hg19 LIHC TCGA-2Y-A9H0 5 18 In-Frame Intra-chr q14.1 q14.1 Seq+ 33212 ChimerSeq STARFusion TCGA_RNA-Seq HSP90B1-ALB HSP90B1 chr12 104336987 + ALB chr4 74274478 + Exonic hg19 LIHC TCGA-2Y-A9H0 3 18 Out-of-frame Inter-chr q23.3 Tumor suppressor gene q13.3 33213 ChimerSeq STARFusion TCGA_RNA-Seq UACA-PTPN6 UACA chr15 70987356 - PTPN6 chr12 7069090 + Exonic hg19 LIHC TCGA-2Y-A9H0 5 9 Out-of-frame Inter-chr q23 p13.31 Tumor suppressor gene Seq+ 33214 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-WFIKKN2 MKL1 chr22 40990678 - WFIKKN2 chr17 48916860 + Exonic hg19 LIHC TCGA-2Y-A9H0 4 12 5'UTR-CDS Inter-chr q13.2 q21.33 Seq+ 33215 ChimerSeq STARFusion TCGA_RNA-Seq SACM1L-TCTA SACM1L chr3 45730989 + TCTA chr3 49450489 + Exonic hg19 LIHC TCGA-2Y-A9H0 6 4 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 33216 ChimerSeq STARFusion TCGA_RNA-Seq BAHD1-KNSTRN BAHD1 chr15 40733467 + KNSTRN chr15 40678563 + Exonic hg19 LIHC TCGA-2Y-A9H0 4 9 Out-of-frame Intra-chr q15.1 q15.1 Oncogene Seq+ 33217 ChimerSeq STARFusion TCGA_RNA-Seq BAHD1-KNSTRN BAHD1 chr15 40733467 + KNSTRN chr15 40675429 + Exonic hg19 LIHC TCGA-2Y-A9H0 3 9 Out-of-frame Intra-chr q15.1 q15.1 Oncogene Seq+ 33218 ChimerSeq STARFusion TCGA_RNA-Seq NSD1-FGFR4 NSD1 chr5 176563031 + FGFR4 chr5 176519322 + Exonic hg19 LIHC TCGA-2Y-A9H0 4 4 Out-of-frame Intra-chr q35.3 Oncogene q35.2 TK:FGFR Oncogene Seq+ 33219 ChimerSeq STARFusion TCGA_RNA-Seq TM7SF3-SNX31 TM7SF3 chr12 27167011 - SNX31 chr8 101612669 - Exonic hg19 LIHC TCGA-2Y-A9H0 2 9 Out-of-frame Inter-chr p11.23 q22.3 Seq+ 33220 ChimerSeq STARFusion TCGA_RNA-Seq LINC00482-SERINC2 LINC00482 chr17 79282985 - SERINC2 chr1 31905814 + Exonic hg19 LIHC TCGA-BC-A10U-01A 2 4 3'UTR-CDS Inter-chr q25.3 p35.2 Seq+ 33221 ChimerSeq STARFusion TCGA_RNA-Seq APOH-C1S APOH chr17 64216672 - C1S chr12 7171571 + Exonic hg19 LIHC TCGA-BC-A10U-01A 2 1 In-Frame Inter-chr q24.2 p13.31 33222 ChimerSeq STARFusion TCGA_RNA-Seq ULK1-NOC4L ULK1 chr12 132401607 + NOC4L chr12 132635526 + Exonic hg19 LIHC TCGA-BC-A10U-01A 2 1 In-Frame Intra-chr q24.33 Other:ULK q24.33 33223 ChimerSeq STARFusion TCGA_RNA-Seq KNG1-HRG KNG1 chr3 186461328 + HRG chr3 186395361 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 288 645 Out-of-frame Intra-chr q27.3 q27.3 Tumor suppressor gene 33224 ChimerSeq STARFusion TCGA_RNA-Seq TPST2-CRYBB1 TPST2 chr22 26932254 - CRYBB1 chr22 26997985 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 26 111 In-Frame Intra-chr q12.1 q12.1 Seq+ 33225 ChimerSeq STARFusion TCGA_RNA-Seq NMD3-USP40 NMD3 chr3 160953000 + USP40 chr2 234407258 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 23 103 In-Frame Inter-chr q26.1 q37.1 Seq+ 33226 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK1-GCK EIF2AK1 chr7 6094177 - GCK chr7 44189663 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 17 78 Out-of-frame Intra-chr p22.1 p13 STE:STE20 Seq+ 33227 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-RELB DNM2 chr19 10829079 + RELB chr19 45537502 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 19 46 Out-of-frame Intra-chr p13.2 q13.32 Transcription factor Seq+ 33228 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK1-GCK EIF2AK1 chr7 6094177 - GCK chr7 44189458 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 6 77 Out-of-frame Intra-chr p22.1 p13 STE:STE20 Seq+ 33229 ChimerSeq STARFusion TCGA_RNA-Seq CAPN12-LGALS7B CAPN12 chr19 39232417 - LGALS7B chr19 39280256 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 6 47 Out-of-frame Intra-chr q13.2 33230 ChimerSeq STARFusion TCGA_RNA-Seq PRR14L-POLD4 PRR14L chr22 32145979 - POLD4 chr11 67120548 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 12 22 5'UTR-CDS Inter-chr q12.2 q13.2 Seq+ 33231 ChimerSeq STARFusion TCGA_RNA-Seq ALDH1A1-FXYD1 ALDH1A1 chr9 75538935 - FXYD1 chr19 35630980 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 7 40 CDS-5'UTR Inter-chr q21.13 q13.12 Seq+ 33232 ChimerSeq STARFusion TCGA_RNA-Seq C19orf60-NT5DC2 C19orf60 chr19 18699887 + NT5DC2 chr3 52563350 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 6 36 Out-of-frame Inter-chr p13.11 p21.1 Seq+ 33233 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A14-XPO7 SLC39A14 chr8 22224921 + XPO7 chr8 21856266 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 7 28 5'UTR-CDS Intra-chr p21.3 p21.3 Seq+ 33234 ChimerSeq STARFusion TCGA_RNA-Seq ABL1-FUBP3 ABL1 chr9 133589842 + FUBP3 chr9 133493184 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 7 26 Out-of-frame Intra-chr q34.12 TK:Abl Oncogene q34.11 Seq+ 33235 ChimerSeq STARFusion TCGA_RNA-Seq CYP2C18-HELLS CYP2C18 chr10 96466717 + HELLS chr10 96331145 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 6 30 In-Frame Intra-chr q23.33 q23.33 Seq+ 33236 ChimerSeq STARFusion TCGA_RNA-Seq CYP2C19-HELLS CYP2C19 chr10 96466717 + HELLS chr10 96331145 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 6 30 5'UTR-CDS Intra-chr q23.33 Oncogene q23.33 33237 ChimerSeq STARFusion TCGA_RNA-Seq TEAD1-ZCCHC8 TEAD1 chr11 12697108 + ZCCHC8 chr12 122967242 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 6 30 5'UTR-CDS Inter-chr p15.3 Transcription factor q24.31 Seq+ 33238 ChimerSeq STARFusion TCGA_RNA-Seq TEAD1-ZCCHC8 TEAD1 chr11 12697108 + ZCCHC8 chr12 122968110 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 5 30 5'UTR-CDS Inter-chr p15.3 Transcription factor q24.31 Seq+ 33239 ChimerSeq STARFusion TCGA_RNA-Seq CENPC-STAP1 CENPC chr4 68405558 - STAP1 chr4 68436802 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 6 25 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 33240 ChimerSeq STARFusion TCGA_RNA-Seq ALG9-POU2AF1 ALG9 chr11 111680367 - POU2AF1 chr11 111275447 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 6 21 CDS-5'UTR Intra-chr q23.1 q23.1 Transcription factor 33241 ChimerSeq STARFusion TCGA_RNA-Seq C19orf60-NT5DC2 C19orf60 chr19 18699710 + NT5DC2 chr3 52563350 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 2 35 Out-of-frame Inter-chr p13.11 p21.1 Seq+ 33242 ChimerSeq STARFusion TCGA_RNA-Seq TRIM7-CCDC64 TRIM7 chr5 180627532 - CCDC64 chr12 120436338 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 5 22 Out-of-frame Inter-chr q35.3 33243 ChimerSeq STARFusion TCGA_RNA-Seq CS-DGKD CS chr12 56693944 - DGKD chr2 234343026 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 6 16 In-Frame Inter-chr q13.3 Seq+ 33244 ChimerSeq STARFusion TCGA_RNA-Seq ALG9-POU2AF1 ALG9 chr11 111680367 - POU2AF1 chr11 111275447 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 6 14 CDS-5'UTR Intra-chr q23.1 q23.1 Transcription factor 33245 ChimerSeq STARFusion TCGA_RNA-Seq MYO18A-SEZ6 MYO18A chr17 27492960 - SEZ6 chr17 27309057 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 7 8 Out-of-frame Intra-chr q11.2 Oncogene q11.2 33246 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A14-XPO7 SLC39A14 chr8 22225250 + XPO7 chr8 21856266 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 2 28 5'UTR-CDS Intra-chr p21.3 p21.3 Seq+ 33247 ChimerSeq STARFusion TCGA_RNA-Seq AMBP-KIF12 AMBP chr9 116837240 - KIF12 chr9 116858758 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 5 13 In-Frame Intra-chr q32 q32 33248 ChimerSeq STARFusion TCGA_RNA-Seq PHACTR4-SESN2 PHACTR4 chr1 28696336 + SESN2 chr1 28595694 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 4 16 5'UTR-CDS Intra-chr p35.3 Tumor suppressor gene p35.3 Seq+ 33249 ChimerSeq STARFusion TCGA_RNA-Seq CPQ-SDC2 CPQ chr8 97657630 + SDC2 chr8 97605708 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 6 7 5'UTR-CDS Intra-chr q22.1 q22.1 33250 ChimerSeq STARFusion TCGA_RNA-Seq SERPINC1-RC3H1 SERPINC1 chr1 173878525 - RC3H1 chr1 173900621 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 4 12 Out-of-frame Intra-chr q25.1 q25.1 33251 ChimerSeq STARFusion TCGA_RNA-Seq BCAR3-ABCA4 BCAR3 chr1 94079404 - ABCA4 chr1 94505683 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 2 16 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 33252 ChimerSeq STARFusion TCGA_RNA-Seq HERPUD2-AOAH HERPUD2 chr7 35733794 - AOAH chr7 36580097 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 3 11 Out-of-frame Intra-chr p14.2 p14.2 Seq+ 33253 ChimerSeq STARFusion TCGA_RNA-Seq ASS1-HMCN2 ASS1 chr9 133327720 + HMCN2 chr9 133297964 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 4 5 Out-of-frame Intra-chr q34.11 Tumor suppressor gene q34.11 Seq+ 33254 ChimerSeq STARFusion TCGA_RNA-Seq C10orf32-WBP1L C10orf32 chr10 104622689 + WBP1L chr10 104569650 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 2 13 3'UTR-CDS Intra-chr q24.32 33255 ChimerSeq STARFusion TCGA_RNA-Seq ASS1-HMCN2 ASS1 chr9 133320382 + HMCN2 chr9 133297964 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 2 4 Out-of-frame Intra-chr q34.11 Tumor suppressor gene q34.11 Seq+ 33256 ChimerSeq STARFusion TCGA_RNA-Seq RALY-WDR53 RALY chr20 32660136 + WDR53 chr3 196288362 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 2 4 CDS-5'UTR Inter-chr q11.22 q29 Seq+ 33257 ChimerSeq STARFusion TCGA_RNA-Seq DBT-SASS6 DBT chr1 100700992 - SASS6 chr1 100587105 - Exonic hg19 LIHC TCGA-DD-AADR 2 5 In-Frame Intra-chr p21.2 p21.2 Seq+ 33258 ChimerSeq STARFusion TCGA_RNA-Seq HP-C3 HP chr16 72094660 + C3 chr19 6677988 - Exonic hg19 LIHC TCGA-DD-AADQ 5 22 Out-of-frame Inter-chr q22.2 Tumor suppressor gene p13.3 33259 ChimerSeq STARFusion TCGA_RNA-Seq HP-C3 HP chr16 72110851 + C3 chr19 6677988 - Exonic hg19 LIHC TCGA-DD-AADQ 3 19 Out-of-frame Inter-chr q22.2 Tumor suppressor gene p13.3 33260 ChimerSeq STARFusion TCGA_RNA-Seq HPR-C3 HPR chr16 72110851 + C3 chr19 6677988 - Exonic hg19 LIHC TCGA-DD-AADQ 5 5 Out-of-frame Inter-chr q22.2 p13.3 33261 ChimerSeq STARFusion TCGA_RNA-Seq RSF1-CLNS1A RSF1 chr11 77451776 - CLNS1A chr11 77340944 - Exonic hg19 LIHC TCGA-DD-AADP 8 18 In-Frame Intra-chr q14.1 q14.1 Seq+ 33262 ChimerSeq STARFusion TCGA_RNA-Seq ISG20L2-HDGF ISG20L2 chr1 156696698 - HDGF chr1 156729011 - Exonic hg19 LIHC TCGA-DD-AADP 2 8 CDS-5'UTR Intra-chr q23.1 q23.1 Seq+ 33263 ChimerSeq STARFusion TCGA_RNA-Seq C4BPA-IL24 C4BPA chr1 207277775 + IL24 chr1 207071076 + Exonic hg19 LIHC TCGA-DD-AADV 2 2 5'UTR-5'UTR Intra-chr q32.2 q32.1 Tumor suppressor gene 33264 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP19-CYB5A ARHGAP19 chr10 99052329 - CYB5A chr18 71930712 - Exonic hg19 LIHC TCGA-DD-A115-01A 40 47 Out-of-frame Inter-chr q24.1 q22.3 Tumor suppressor gene Seq+ 33265 ChimerSeq STARFusion TCGA_RNA-Seq CPT1A-ANPEP CPT1A chr11 68609243 - ANPEP chr15 90328732 - Exonic hg19 LIHC TCGA-DD-A115-01A 31 65 5'UTR-CDS Inter-chr q13.3 q26.1 Seq+ 33266 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-KIAA0146 MKL1 chr22 41032482 - KIAA0146 chr8 48586363 + Exonic hg19 LIHC TCGA-DD-A115-01A 19 97 5'UTR-CDS Inter-chr q13.2 Seq+ 33267 ChimerSeq STARFusion TCGA_RNA-Seq ITGB1-FLNB ITGB1 chr10 33247073 - FLNB chr3 58153447 + Exonic hg19 LIHC TCGA-DD-A115-01A 12 53 5'UTR-CDS Inter-chr p11.22 Tumor suppressor gene p14.3 33268 ChimerSeq STARFusion TCGA_RNA-Seq ADAM15-DCST1 ADAM15 chr1 155025253 + DCST1 chr1 155006448 + Exonic hg19 LIHC TCGA-DD-A115-01A 9 39 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 33269 ChimerSeq STARFusion TCGA_RNA-Seq CALD1-CGN CALD1 chr7 134576424 + CGN chr1 151490982 + Exonic hg19 LIHC TCGA-DD-A115-01A 9 39 CDS-5'UTR Inter-chr q33 q21.3 Seq+ 33270 ChimerSeq STARFusion TCGA_RNA-Seq CPM-GOLT1B CPM chr12 69326458 - GOLT1B chr12 21659819 + Exonic hg19 LIHC TCGA-DD-A115-01A 4 37 In-Frame Intra-chr q15 p12.1 Seq+ 33271 ChimerSeq STARFusion TCGA_RNA-Seq ABHD6-FLNB ABHD6 chr3 58242432 + FLNB chr3 58104599 + Exonic hg19 LIHC TCGA-DD-A115-01A 5 14 Out-of-frame Intra-chr p14.3 p14.3 Seq+ 33272 ChimerSeq STARFusion TCGA_RNA-Seq AKNA-DFNB31 AKNA chr9 117129823 - DFNB31 chr9 117188693 - Exonic hg19 LIHC TCGA-DD-A115-01A 2 10 In-Frame Intra-chr q32 Transcription factor Seq+ 33273 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A30-CCDC107 SLC25A30 chr13 45983062 - CCDC107 chr9 35658573 + Exonic hg19 LIHC TCGA-DD-A115-01A 2 7 Out-of-frame Inter-chr q14.13 p13.3 Seq+ 33274 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A30-CCDC107 SLC25A30 chr13 45985497 - CCDC107 chr9 35658573 + Exonic hg19 LIHC TCGA-DD-A115-01A 2 7 In-Frame Inter-chr q14.13 p13.3 Seq+ 33275 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-GNB5 C6orf48 chr6_qbl_hap6 3098868 + GNB5 chr15 52446273 - Exonic hg19 LIHC TCGA-DD-A115-01A 3 2 5'UTR-CDS Inter-chr q21.2 Seq+ 33276 ChimerSeq STARFusion TCGA_RNA-Seq C1orf174-CLCN7 C1orf174 chr1 3809447 - CLCN7 chr16 1509188 - Exonic hg19 LIHC TCGA-DD-A115-01A 2 1 In-Frame Inter-chr p36.32 p13.3 33277 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC25-ZNF483 DNAJC25 chr9 114394023 + ZNF483 chr9 114338645 + Exonic hg19 LIHC TCGA-DD-A115-01A 2 0 Out-of-frame Intra-chr q31.3 q31.3 Transcription factor 33278 ChimerSeq STARFusion TCGA_RNA-Seq RNF121-SLC22A8 RNF121 chr11 71671937 + SLC22A8 chr11 62763624 - Exonic hg19 LIHC TCGA-DD-AADY 2 8 Out-of-frame Intra-chr q13.4 q12.3 Seq+ 33279 ChimerSeq STARFusion TCGA_RNA-Seq PTRF-HEATR6 PTRF chr17 40574645 - HEATR6 chr17 58125749 - Exonic hg19 LIHC TCGA-DD-AADC 3 2 In-Frame Intra-chr q23.1 Seq+ 33280 ChimerSeq STARFusion TCGA_RNA-Seq STXBP4-GRN STXBP4 chr17 53068318 + GRN chr17 42429709 + Exonic hg19 LIHC TCGA-DD-AADC 2 1 In-Frame Intra-chr q22 q21.31 Seq+ 33281 ChimerSeq STARFusion TCGA_RNA-Seq TECR-NDUFB7 TECR chr19 14640523 + NDUFB7 chr19 14677745 - Exonic hg19 LIHC TCGA-DD-AADB 8 29 Out-of-frame Intra-chr p13.12 p13.12 Seq+ 33282 ChimerSeq STARFusion TCGA_RNA-Seq CLSTN3-LRRC23 CLSTN3 chr12 7295907 + LRRC23 chr12 7023055 + Exonic hg19 LIHC TCGA-DD-AADA 157 489 In-Frame Intra-chr p13.31 p13.31 Seq+ 33283 ChimerSeq STARFusion TCGA_RNA-Seq ALB-LBR ALB chr4 74276127 + LBR chr1 225615438 - Exonic hg19 LIHC TCGA-DD-AADA 6 1 Out-of-frame Inter-chr q13.3 q42.12 33284 ChimerSeq STARFusion TCGA_RNA-Seq GTF2F2-GPALPP1 GTF2F2 chr13 45827105 + GPALPP1 chr13 45589087 + Exonic hg19 LIHC TCGA-DD-AADA 2 7 Out-of-frame Intra-chr q14.12 q14.12 Seq+ 33285 ChimerSeq STARFusion TCGA_RNA-Seq RBP4-RPS6KB2 RBP4 chr10 95360147 - RPS6KB2 chr11 67200673 + Exonic hg19 LIHC TCGA-DD-AADG 6 1 Out-of-frame Inter-chr q23.33 q13.2 33286 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-RHOD KDM2A chr11 66999431 + RHOD chr11 66837896 + Exonic hg19 LIHC TCGA-DD-AADF 5 35 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 33287 ChimerSeq STARFusion TCGA_RNA-Seq SYF2-RHD SYF2 chr1 25558595 - RHD chr1 25611064 + Exonic hg19 LIHC TCGA-FV-A3R3-01A 2 11 Out-of-frame Intra-chr p36.11 p36.11 Seq+ 33288 ChimerSeq STARFusion TCGA_RNA-Seq SERPINA1-APOA2 SERPINA1 chr14 94844877 - APOA2 chr1 161192312 - Exonic hg19 LIHC TCGA-DD-AADK 3 201 Out-of-frame Inter-chr q32.13 q23.3 33289 ChimerSeq STARFusion TCGA_RNA-Seq AFM-ALB AFM chr4 74361149 + ALB chr4 74283248 + Exonic hg19 LIHC TCGA-DD-AADK 6 57 Out-of-frame Intra-chr q13.3 q13.3 33290 ChimerSeq STARFusion TCGA_RNA-Seq SERPINA1-IGH@ SERPINA1 chr14 94844884 - IGH@ chr14 106208437 - Exonic hg19 LIHC TCGA-DD-AADK 11 16 Out-of-frame Intra-chr q32.13 32.33 33291 ChimerSeq STARFusion TCGA_RNA-Seq SERPINA1-IGHG1 SERPINA1 chr14 94844884 - IGHG1 chr14 106208437 - Exonic hg19 LIHC TCGA-DD-AADK 11 13 Out-of-frame Intra-chr q32.13 q32.33 33292 ChimerSeq STARFusion TCGA_RNA-Seq SERPINA1-IGH@ SERPINA1 chr14 94844885 - IGH@ chr14 106236202 - Exonic hg19 LIHC TCGA-DD-AADK 6 10 Out-of-frame Intra-chr q32.13 32.33 33293 ChimerSeq STARFusion TCGA_RNA-Seq SERPINA1-IGH@ SERPINA1 chr14 94844794 - IGH@ chr14 106208437 - Exonic hg19 LIHC TCGA-DD-AADK 4 16 Out-of-frame Intra-chr q32.13 32.33 33294 ChimerSeq STARFusion TCGA_RNA-Seq SERPINA1-IGHG1 SERPINA1 chr14 94844794 - IGHG1 chr14 106208437 - Exonic hg19 LIHC TCGA-DD-AADK 4 13 Out-of-frame Intra-chr q32.13 q32.33 33295 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KA3-EIF1AX RPS6KA3 chrX 20284682 - EIF1AX chrX 20153959 - Exonic hg19 LIHC TCGA-DD-AADJ 33 89 Out-of-frame Intra-chr p22.12 p22.12 Seq+ 33296 ChimerSeq STARFusion TCGA_RNA-Seq UPF3A-CDC16 UPF3A chr13 115052104 + CDC16 chr13 115027362 + Exonic hg19 LIHC TCGA-DD-AADJ 10 27 Out-of-frame Intra-chr q34 q34 Seq+ 33297 ChimerSeq STARFusion TCGA_RNA-Seq UPF3A-CDC16 UPF3A chr13 115052104 + CDC16 chr13 115028354 + Exonic hg19 LIHC TCGA-DD-AADJ 4 27 Out-of-frame Intra-chr q34 q34 Seq+ 33298 ChimerSeq STARFusion TCGA_RNA-Seq SFMBT1-ITIH4 SFMBT1 chr3 53052102 - ITIH4 chr3 52848087 - Exonic hg19 LIHC TCGA-DD-AADM 3 36 5'UTR-CDS Intra-chr p21.1 p21.1 Seq+ 33299 ChimerSeq STARFusion TCGA_RNA-Seq ALDH1L1-SLC41A3 ALDH1L1 chr3 125872287 - SLC41A3 chr3 125769893 - Exonic hg19 LIHC TCGA-DD-AADM 5 22 In-Frame Intra-chr q21.3 q21.3 Seq+ 33300 ChimerSeq STARFusion TCGA_RNA-Seq SEC14L2-CCDC157 SEC14L2 chr22 30812392 + CCDC157 chr22 30757950 + Exonic hg19 LIHC TCGA-DD-AADL 4 19 CDS-5'UTR Intra-chr q12.2 Tumor suppressor gene q12.2 Seq+ 33301 ChimerSeq STARFusion TCGA_RNA-Seq CDK13-C7orf10 CDK13 chr7 40041630 + C7orf10 chr7 40228094 + Exonic hg19 LIHC TCGA-DD-AADL 4 13 In-Frame Intra-chr p14.1 Seq+ 33302 ChimerSeq STARFusion TCGA_RNA-Seq ILF3-SMARCA4 ILF3 chr19 10782211 + SMARCA4 chr19 11134194 + Exonic hg19 LIHC TCGA-CC-A7IE-01A 18 49 In-Frame Intra-chr p13.2 p13.2 Oncogene Tumor suppressor gene Seq+ 33303 ChimerSeq STARFusion TCGA_RNA-Seq TESK2-PRDX1 TESK2 chr1 45956524 - PRDX1 chr1 45977086 - Exonic hg19 LIHC TCGA-CC-A7IE-01A 4 30 5'UTR-CDS Intra-chr p34.1 TKL:LISK p34.1 Seq+ 33304 ChimerSeq STARFusion TCGA_RNA-Seq SCARNA17-LOC100507412 SCARNA17 chr18 47340432 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LIHC TCGA-DD-A119-01A 5 2 5'UTR-5'UTR Inter-chr q21.1 33305 ChimerSeq STARFusion TCGA_RNA-Seq C19orf25-POP5 C19orf25 chr19 1478773 - POP5 chr12 121017726 - Exonic hg19 LIHC TCGA-DD-A119-01A 2 0 In-Frame Inter-chr p13.3 q24.31 33306 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0319L-CIB2 KIAA0319L chr1 36022808 - CIB2 chr15 78403618 - Exonic hg19 LIHC TCGA-BW-A5NO-01A 13 58 5'UTR-CDS Inter-chr p34.3 q25.1 Seq+ 33307 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0319L-CIB2 KIAA0319L chr1 36022963 - CIB2 chr15 78403618 - Exonic hg19 LIHC TCGA-BW-A5NO-01A 10 58 5'UTR-CDS Inter-chr p34.3 q25.1 Seq+ 33308 ChimerSeq STARFusion TCGA_RNA-Seq HMGCS2-NBPF7 HMGCS2 chr1 120298050 - NBPF7 chr1 120378831 - Exonic hg19 LIHC TCGA-BW-A5NO-01A 4 16 In-Frame Intra-chr p12 p12 Seq+ 33309 ChimerSeq STARFusion TCGA_RNA-Seq ZNF148-LYPLA2 ZNF148 chr3 125093946 - LYPLA2 chr1 24119147 + Exonic hg19 LIHC TCGA-BW-A5NO-01A 5 1 5'UTR-5'UTR Inter-chr q21.2 Transcription factor p36.11 Seq+ 33310 ChimerSeq STARFusion TCGA_RNA-Seq EP400-SDHC EP400 chr12 132434581 + SDHC chr1 161293404 + Exonic hg19 LIHC TCGA-BW-A5NO-01A 3 7 5'UTR-CDS Inter-chr q24.33 Oncogene q23.3 Oncogene Seq+ 33311 ChimerSeq STARFusion TCGA_RNA-Seq AFM-ALB AFM chr4 74354476 + ALB chr4 74285224 + Exonic hg19 LIHC TCGA-CC-A3MC-01A 58 126 Out-of-frame Intra-chr q13.3 q13.3 33312 ChimerSeq STARFusion TCGA_RNA-Seq ERLEC1-CHAC2 ERLEC1 chr2 54021586 + CHAC2 chr2 54001279 + Exonic hg19 LIHC TCGA-CC-A3MC-01A 2 14 In-Frame Intra-chr p16.2 p16.2 Seq+ 33313 ChimerSeq STARFusion TCGA_RNA-Seq LAPTM4B-MTDH LAPTM4B chr8 98837381 + MTDH chr8 98673300 + Exonic hg19 LIHC TCGA-CC-A3MC-01A 3 6 In-Frame Intra-chr q22.1 q22.1 Seq+ 33314 ChimerSeq STARFusion TCGA_RNA-Seq SPON2-CTBP1 SPON2 chr4 1198770 - CTBP1 chr4 1235307 - Exonic hg19 LIHC TCGA-DD-AAD3 2 0 5'UTR-5'UTR Intra-chr p16.3 p16.3 Seq+ 33315 ChimerSeq STARFusion TCGA_RNA-Seq NCOA6-PSMD13 NCOA6 chr20 33329362 - PSMD13 chr11 244041 + Exonic hg19 LIHC TCGA-DD-AAD0 10 14 Out-of-frame Inter-chr q11.22 p15.5 Seq+ 33316 ChimerSeq STARFusion TCGA_RNA-Seq MTHFS-BCL2A1 MTHFS chr15 80181435 - BCL2A1 chr15 80253516 - Exonic hg19 LIHC TCGA-DD-AAD6 12 32 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 33317 ChimerSeq STARFusion TCGA_RNA-Seq MTHFS-BCL2A1 MTHFS chr15 80189214 - BCL2A1 chr15 80253516 - Exonic hg19 LIHC TCGA-DD-AAD6 2 32 In-Frame Intra-chr q25.1 q25.1 Seq+ 33318 ChimerSeq STARFusion TCGA_RNA-Seq RNF213-SLC26A11 RNF213 chr17 78324196 + SLC26A11 chr17 78225128 + Exonic hg19 LIHC TCGA-DD-AAD6 2 18 Out-of-frame Intra-chr q25.3 Oncogene q25.3 Pub Seq+ 33319 ChimerSeq STARFusion TCGA_RNA-Seq RNF213-SLC26A11 RNF213 chr17 78322086 + SLC26A11 chr17 78225128 + Exonic hg19 LIHC TCGA-DD-AAD6 2 18 In-Frame Intra-chr q25.3 Oncogene q25.3 Pub Seq+ 33320 ChimerSeq STARFusion TCGA_RNA-Seq PTDSS2-IFITM1 PTDSS2 chr11 460288 + IFITM1 chr11 314922 + Exonic hg19 LIHC TCGA-DD-AAD5 51 121 Out-of-frame Intra-chr p15.5 Oncogene Seq+ 33321 ChimerSeq STARFusion TCGA_RNA-Seq PTDSS2-IFITM2 PTDSS2 chr11 460288 + IFITM2 chr11 314922 + Exonic hg19 LIHC TCGA-DD-AAD5 51 121 CDS-3'UTR Intra-chr p15.5 Seq+ 33322 ChimerSeq STARFusion TCGA_RNA-Seq PTDSS2-IFITM1 PTDSS2 chr11 460288 + IFITM1 chr11 309013 + Exonic hg19 LIHC TCGA-DD-AAD5 32 121 CDS-5'UTR Intra-chr p15.5 Oncogene Seq+ 33323 ChimerSeq STARFusion TCGA_RNA-Seq PTDSS2-IFITM2 PTDSS2 chr11 460288 + IFITM2 chr11 309013 + Exonic hg19 LIHC TCGA-DD-AAD5 20 71 Out-of-frame Intra-chr p15.5 Seq+ 33324 ChimerSeq STARFusion TCGA_RNA-Seq IDUA-ALS2CR12 IDUA chr4 981737 + ALS2CR12 chr2 202154508 - Exonic hg19 LIHC TCGA-DD-AAD5 9 33 Out-of-frame Inter-chr p16.3 q33.1 Seq+ 33325 ChimerSeq STARFusion TCGA_RNA-Seq BNC2-C9orf92 BNC2 chr9 16400418 - C9orf92 chr9 16215897 - Exonic hg19 LIHC TCGA-DD-AAD5 3 42 Out-of-frame Intra-chr p22.2 Transcription factor p22.3 33326 ChimerSeq STARFusion TCGA_RNA-Seq IDUA-ALS2CR12 IDUA chr4 981699 + ALS2CR12 chr2 202154508 - Exonic hg19 LIHC TCGA-DD-AAD5 3 32 Out-of-frame Inter-chr p16.3 q33.1 Seq+ 33327 ChimerSeq STARFusion TCGA_RNA-Seq C5orf45-SAA1 C5orf45 chr5 179263621 - SAA1 chr11 18287815 + Exonic hg19 LIHC TCGA-DD-AAD5 3 5 Out-of-frame Inter-chr p15.1 Tumor suppressor gene 33328 ChimerSeq STARFusion TCGA_RNA-Seq AGMO-MEOX2 AGMO chr7 15433738 - MEOX2 chr7 15666543 - Exonic hg19 LIHC TCGA-2Y-A9H4-01A 2 6 In-Frame Intra-chr p21.2 p21.2 Transcription factor Seq+ 33329 ChimerSeq STARFusion TCGA_RNA-Seq FAM195B-P4HB FAM195B chr17 79781148 - P4HB chr17 79801437 - Exonic hg19 LIHC TCGA-DD-AAE9 49 75 Out-of-frame Intra-chr q25.3 Seq+ 33330 ChimerSeq STARFusion TCGA_RNA-Seq HSD17B11-SPARCL1 HSD17B11 chr4 88303407 - SPARCL1 chr4 88420737 - Exonic hg19 LIHC TCGA-DD-AAE9 11 23 CDS-5'UTR Intra-chr q22.1 q22.1 Tumor suppressor gene Seq+ 33331 ChimerSeq STARFusion TCGA_RNA-Seq HIVEP1-PTCRA HIVEP1 chr6 12015901 + PTCRA chr6 42890765 + Exonic hg19 LIHC TCGA-4R-AA8I-01A 9 26 In-Frame Intra-chr p24.1 Tumor suppressor gene Transcription factor p21.1 Seq+ 33332 ChimerSeq STARFusion TCGA_RNA-Seq HIVEP1-PTCRA HIVEP1 chr6 12015901 + PTCRA chr6 42891967 + Exonic hg19 LIHC TCGA-4R-AA8I-01A 2 26 In-Frame Intra-chr p24.1 Tumor suppressor gene Transcription factor p21.1 Seq+ 33333 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-MYH13 SEPT9 chr17 75303279 + MYH13 chr17 10263505 - Exonic hg19 LIHC TCGA-4R-AA8I-01A 4 15 In-Frame Intra-chr p13.1 Seq+ 33334 ChimerSeq STARFusion TCGA_RNA-Seq FLVCR2-JDP2 FLVCR2 chr14 76101356 + JDP2 chr14 75935993 + Exonic hg19 LIHC TCGA-4R-AA8I-01A 3 17 Out-of-frame Intra-chr q24.3 q24.3 Tumor suppressor gene Transcription factor Seq+ 33335 ChimerSeq STARFusion TCGA_RNA-Seq SFXN5-SLC8A1 SFXN5 chr2 73247368 - SLC8A1 chr2 40404995 - Exonic hg19 LIHC TCGA-4R-AA8I-01A 3 8 Out-of-frame Intra-chr p13.2 p22.1 Seq+ 33336 ChimerSeq STARFusion TCGA_RNA-Seq LLGL2-PRPSAP1 LLGL2 chr17 73521906 + PRPSAP1 chr17 74328516 - Exonic hg19 LIHC TCGA-4R-AA8I-01A 2 2 5'UTR-CDS Intra-chr q25.1 q25.1 33337 ChimerSeq STARFusion TCGA_RNA-Seq DCAF5-ERH DCAF5 chr14 69619482 - ERH chr14 69853800 - Exonic hg19 LIHC TCGA-DD-A11A-01A 10 119 In-Frame Intra-chr q24.1 q24.1 Seq+ 33338 ChimerSeq STARFusion TCGA_RNA-Seq DCAF5-ERH DCAF5 chr14 69619661 - ERH chr14 69853800 - Exonic hg19 LIHC TCGA-DD-A11A-01A 3 119 In-Frame Intra-chr q24.1 q24.1 Seq+ 33339 ChimerSeq STARFusion TCGA_RNA-Seq MGRN1-DNAJA3 MGRN1 chr16 4727573 + DNAJA3 chr16 4504812 + Exonic hg19 LIHC TCGA-DD-A11A-01A 4 11 Out-of-frame Intra-chr p13.3 Tumor suppressor gene Seq+ 33340 ChimerSeq STARFusion TCGA_RNA-Seq FGGY-HOOK1 FGGY chr1 60073582 + HOOK1 chr1 60299077 + Exonic hg19 LIHC TCGA-DD-A11A-01A 2 8 In-Frame Intra-chr p32.1 p32.1 Seq+ 33341 ChimerSeq STARFusion TCGA_RNA-Seq HP-C3 HP chr16 72094669 + C3 chr19 6677979 - Exonic hg19 LIHC TCGA-ZS-A9CE-01A 4 27 Out-of-frame Inter-chr q22.2 Tumor suppressor gene p13.3 33342 ChimerSeq STARFusion TCGA_RNA-Seq MORC2-APOC3 MORC2 chr22 31328637 - APOC3 chr11 116703480 + Exonic hg19 LIHC TCGA-ZS-A9CE-01A 3 0 In-Frame Inter-chr q12.2 q23.3 33343 ChimerSeq STARFusion TCGA_RNA-Seq ITCH-AHCY ITCH chr20 32957276 + AHCY chr20 32883391 - Exonic hg19 LIHC TCGA-G3-AAV5-01A 4 3 5'UTR-5'UTR Intra-chr q11.22 q11.22 Seq+ 33344 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP35-WDR88 ARHGAP35 chr19 47425613 + WDR88 chr19 33635750 + Exonic hg19 LIHC TCGA-ED-A8O6-01A 2 0 In-Frame Intra-chr q13.32 Transcription factor q13.11 33345 ChimerSeq STARFusion TCGA_RNA-Seq FDFT1-CLVS1 FDFT1 chr8 11667359 + CLVS1 chr8 62212236 + Exonic hg19 LIHC TCGA-GJ-A3OU-01A 2 2 CDS-5'UTR Intra-chr p23.1 q12.2 Seq+ 33346 ChimerSeq STARFusion TCGA_RNA-Seq DTNA-AQP4 DTNA chr18 32073478 + AQP4 chr18 24442560 - Exonic hg19 LIHC TCGA-FV-A3I0-01A 7 14 5'UTR-CDS Intra-chr q12.1 q11.2 Seq+ 33347 ChimerSeq STARFusion TCGA_RNA-Seq MYO18A-SSH2 MYO18A chr17 27421668 - SSH2 chr17 28120955 - Exonic hg19 LIHC TCGA-CC-A8HV-01A 6 5 In-Frame Intra-chr q11.2 Oncogene q11.2 Seq+ 33348 ChimerSeq STARFusion TCGA_RNA-Seq SMYD4-PELP1 SMYD4 chr17 1686329 - PELP1 chr17 4594737 - Exonic hg19 LIHC TCGA-CC-A8HV-01A 3 11 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p13.2 Seq+ 33349 ChimerSeq STARFusion TCGA_RNA-Seq SQLE-RBFOX3 SQLE chr8 126023874 + RBFOX3 chr17 77303906 - Exonic hg19 LIHC TCGA-CC-A8HV-01A 3 11 CDS-5'UTR Inter-chr q24.13 q25.3 Seq+ 33350 ChimerSeq STARFusion TCGA_RNA-Seq CYP2D6-SULT4A1 CYP2D6 chr22 42526614 - SULT4A1 chr22 44237812 - Exonic hg19 LIHC TCGA-CC-A8HV-01A 3 7 Out-of-frame Intra-chr Oncogene q13.31 Seq+ 33351 ChimerSeq STARFusion TCGA_RNA-Seq BICC1-CISD1 BICC1 chr10 60461903 + CISD1 chr10 60036877 + Exonic hg19 LIHC TCGA-CC-A8HV-01A 2 2 In-Frame Intra-chr q21.1 q21.1 33352 ChimerSeq STARFusion TCGA_RNA-Seq IFT43-TTLL5 IFT43 chr14 76488737 + TTLL5 chr14 76420767 + Exonic hg19 LIHC TCGA-2Y-A9GU-01A 7 16 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 33353 ChimerSeq STARFusion TCGA_RNA-Seq CAMSAP2-DHRS3 CAMSAP2 chr1 200730226 + DHRS3 chr1 12640694 - Exonic hg19 LIHC TCGA-CC-5258-01A 13 45 In-Frame Intra-chr q32.1 p36.21 Seq+ 33354 ChimerSeq STARFusion TCGA_RNA-Seq LRRFIP2-SETD2 LRRFIP2 chr3 37216030 - SETD2 chr3 47088111 - Exonic hg19 LIHC TCGA-CC-5258-01A 3 7 5'UTR-CDS Intra-chr p22.2 p21.31 Oncogene Tumor suppressor gene Seq+ 33355 ChimerSeq STARFusion TCGA_RNA-Seq LRRFIP2-SETD2 LRRFIP2 chr3 37216030 - SETD2 chr3 47098980 - Exonic hg19 LIHC TCGA-CC-5258-01A 2 7 5'UTR-CDS Intra-chr p22.2 p21.31 Oncogene Tumor suppressor gene Seq+ 33356 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K13-CLPTM1L MAP3K13 chr3 185191549 + CLPTM1L chr5 1341975 - Exonic hg19 LIHC TCGA-CC-5258-01A 2 6 Out-of-frame Inter-chr q27.2 p15.33 Seq+ 33357 ChimerSeq STARFusion TCGA_RNA-Seq TRIM37-MSI2 TRIM37 chr17 57148184 - MSI2 chr17 55478740 + Exonic hg19 LIHC TCGA-CC-5258-01A 2 3 Out-of-frame Intra-chr q22 q22 Seq+ 33358 ChimerSeq STARFusion TCGA_RNA-Seq GPHN-MPP5 GPHN chr14 67147903 + MPP5 chr14 67786947 + Exonic hg19 LIHC TCGA-CC-5258-01A 2 2 Out-of-frame Intra-chr q23.3 q23.3 33359 ChimerSeq STARFusion TCGA_RNA-Seq CPQ-SDC2 CPQ chr8 97657630 + SDC2 chr8 97605708 + Exonic hg19 LIHC TCGA-ZS-A9CD-01A 32 37 5'UTR-CDS Intra-chr q22.1 q22.1 33360 ChimerSeq STARFusion TCGA_RNA-Seq EIF5A-LOC100507412 EIF5A chr17 7211071 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LIHC TCGA-ZS-A9CD-01A 13 34 5'UTR-5'UTR Inter-chr p13.1 33361 ChimerSeq STARFusion TCGA_RNA-Seq PHF23-TOM1 PHF23 chr17 7142565 - TOM1 chr22 35741718 + Exonic hg19 LIHC TCGA-ZS-A9CD-01A 6 7 Out-of-frame Inter-chr p13.1 q12.3 Seq+ 33362 ChimerSeq STARFusion TCGA_RNA-Seq RAB40B-YBX2 RAB40B chr17 80656331 - YBX2 chr17 7193854 - Exonic hg19 LIHC TCGA-ZS-A9CD-01A 2 11 Out-of-frame Intra-chr q25.3 p13.1 Transcription factor Seq+ 33363 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB1-PRKACA DNAJB1 chr19 14628951 - PRKACA chr19 14218221 - Exonic hg19 LIHC TCGA-RC-A6M3-01A 74 340 In-Frame Intra-chr p13.12 Tumor suppressor gene p13.12 KB Pub Seq+ 33364 ChimerSeq STARFusion TCGA_RNA-Seq BCAR1-CFDP1 BCAR1 chr16 75276368 - CFDP1 chr16 75327940 - Exonic hg19 LIHC TCGA-RC-A6M3-01A 17 30 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 33365 ChimerSeq STARFusion TCGA_RNA-Seq TGFBR1-COL15A1 TGFBR1 chr9 101910066 + COL15A1 chr9 101777699 + Exonic hg19 LIHC TCGA-RC-A6M3-01A 7 35 In-Frame Intra-chr q22.33 q22.33 Seq+ 33366 ChimerSeq STARFusion TCGA_RNA-Seq APP-LINC00159 APP chr21 27277336 - LINC00159 chr21 33458608 - Exonic hg19 LIHC TCGA-RC-A6M3-01A 4 14 CDS-5'UTR Intra-chr q21.3 q22.11 Seq+ 33367 ChimerSeq STARFusion TCGA_RNA-Seq DSCR3-CTSH DSCR3 chr21 38639539 - CTSH chr15 79231513 - Exonic hg19 LIHC TCGA-RC-A6M3-01A 5 10 Out-of-frame Inter-chr q22.13 q25.1 Seq+ 33368 ChimerSeq STARFusion TCGA_RNA-Seq PPCDC-LMAN1L PPCDC chr15 75315967 + LMAN1L chr15 75105291 + Exonic hg19 LIHC TCGA-RC-A6M3-01A 6 3 5'UTR-CDS Intra-chr q24.2 q24.1 Seq+ 33369 ChimerSeq STARFusion TCGA_RNA-Seq DENND4A-DPP8 DENND4A chr15 66021410 - DPP8 chr15 65804902 - Exonic hg19 LIHC TCGA-RC-A6M3-01A 3 13 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 33370 ChimerSeq STARFusion TCGA_RNA-Seq ONECUT1-C15orf60 ONECUT1 chr15 53049283 - C15orf60 chr15 73832826 + Exonic hg19 LIHC TCGA-RC-A6M3-01A 3 10 3'UTR-CDS Intra-chr q21.3 Tumor suppressor gene Transcription factor 33371 ChimerSeq STARFusion TCGA_RNA-Seq SPEN-FBLIM1 SPEN chr1 16174645 + FBLIM1 chr1 16096904 + Exonic hg19 LIHC TCGA-RC-A6M3-01A 3 5 Out-of-frame Intra-chr p36.21 Transcription factor p36.21 Seq+ 33372 ChimerSeq STARFusion TCGA_RNA-Seq HMG20A-SCAMP5 HMG20A chr15 77713346 + SCAMP5 chr15 75304133 + Exonic hg19 LIHC TCGA-RC-A6M3-01A 2 3 5'UTR-5'UTR Intra-chr q24.3 Transcription factor q24.2 Seq+ 33373 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-CYSTM1 ANKHD1 chr5 139893064 + CYSTM1 chr5 139622890 + Exonic hg19 LIHC TCGA-RC-A6M3-01A 2 1 Out-of-frame Intra-chr q31.3 q31.3 33374 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KA3-MAP7D2 RPS6KA3 chrX 20284682 - MAP7D2 chrX 20044070 - Exonic hg19 LIHC TCGA-CC-A123 4 1 Out-of-frame Intra-chr p22.12 p22.12 Seq+ 33375 ChimerSeq STARFusion TCGA_RNA-Seq SLC20A2-ADORA3 SLC20A2 chr8 42396681 - ADORA3 chr1 112031489 - Exonic hg19 LIHC TCGA-DD-AAVZ 8 63 Out-of-frame Inter-chr p11.21 p13.2 Seq+ 33376 ChimerSeq STARFusion TCGA_RNA-Seq SLC20A2-ADORA3 SLC20A2 chr8 42396681 - ADORA3 chr1 112031646 - Exonic hg19 LIHC TCGA-DD-AAVZ 6 63 5'UTR-CDS Inter-chr p11.21 p13.2 Seq+ 33377 ChimerSeq STARFusion TCGA_RNA-Seq SLC20A2-ADORA3 SLC20A2 chr8 42358549 - ADORA3 chr1 112031489 - Exonic hg19 LIHC TCGA-DD-AAVZ 2 63 5'UTR-CDS Inter-chr p11.21 p13.2 Seq+ 33378 ChimerSeq STARFusion TCGA_RNA-Seq SERPINA1-IGH@ SERPINA1 chr14 94844888 - IGH@ chr14 106208441 - Exonic hg19 LIHC TCGA-DD-AAVQ 9 72 Out-of-frame Intra-chr q32.13 32.33 33379 ChimerSeq STARFusion TCGA_RNA-Seq SERPINA1-IGHG1 SERPINA1 chr14 94844888 - IGHG1 chr14 106208441 - Exonic hg19 LIHC TCGA-DD-AAVQ 9 52 Out-of-frame Intra-chr q32.13 q32.33 33380 ChimerSeq STARFusion TCGA_RNA-Seq SERPINA1-IGH@ SERPINA1 chr14 94844794 - IGH@ chr14 106208437 - Exonic hg19 LIHC TCGA-DD-AAVQ 3 65 Out-of-frame Intra-chr q32.13 32.33 33381 ChimerSeq STARFusion TCGA_RNA-Seq SERPINA1-IGHG1 SERPINA1 chr14 94844794 - IGHG1 chr14 106208437 - Exonic hg19 LIHC TCGA-DD-AAVQ 3 52 Out-of-frame Intra-chr q32.13 q32.33 33382 ChimerSeq STARFusion TCGA_RNA-Seq ALB-IGKC ALB chr4 74285307 + IGKC chr2 89156871 - Exonic hg19 LIHC TCGA-DD-AAVQ 3 46 Out-of-frame Inter-chr q13.3 p11.2 33383 ChimerSeq STARFusion TCGA_RNA-Seq SERPINA1-IGH@ SERPINA1 chr14 94844888 - IGH@ chr14 106236205 - Exonic hg19 LIHC TCGA-DD-AAVQ 4 39 Out-of-frame Intra-chr q32.13 32.33 33384 ChimerSeq STARFusion TCGA_RNA-Seq SERPINA1-IGH@ SERPINA1 chr14 94844870 - IGH@ chr14 106236186 - Exonic hg19 LIHC TCGA-DD-AAVQ 3 39 Out-of-frame Intra-chr q32.13 32.33 33385 ChimerSeq STARFusion TCGA_RNA-Seq PRKAG2-RHEB PRKAG2 chr7 151478238 - RHEB chr7 151188100 - Exonic hg19 LIHC TCGA-DD-A1ED-01A 2 1 In-Frame Intra-chr q36.1 q36.1 Oncogene 33386 ChimerSeq STARFusion TCGA_RNA-Seq DLK1-C1QB DLK1 chr14 101198516 + C1QB chr1 22987904 + Exonic hg19 LIHC TCGA-CC-A7II-01A 8 1 Out-of-frame Inter-chr q32.2 Tumor suppressor gene p36.12 33387 ChimerSeq STARFusion TCGA_RNA-Seq NDUFA4-PHF14 NDUFA4 chr7 10979643 - PHF14 chr7 11150977 + Exonic hg19 LIHC TCGA-CC-A7II-01A 2 1 CDS-5'UTR Intra-chr p21.3 p21.3 Seq+ 33388 ChimerSeq STARFusion TCGA_RNA-Seq ITPR2-CLIC1 ITPR2 chr12 26943090 - CLIC1 chr6 31704127 - Exonic hg19 LIHC TCGA-MI-A75I-01A 5 3 CDS-5'UTR Inter-chr p11.23 Seq+ 33389 ChimerSeq STARFusion TCGA_RNA-Seq IGF2-REG3A IGF2 chr11 2159991 - REG3A chr2 79384245 - Exonic hg19 LIHC TCGA-XR-A8TE-01A 3 40 Out-of-frame Inter-chr p15.5 Oncogene p12 Seq+ 33390 ChimerSeq STARFusion TCGA_RNA-Seq AFM-ALB AFM chr4 74347580 + ALB chr4 74277713 + Exonic hg19 LIHC TCGA-DD-A4NR-01A 2 10 Out-of-frame Intra-chr q13.3 q13.3 33391 ChimerSeq STARFusion TCGA_RNA-Seq ARID1A-PRKCZ ARID1A chr1 27088810 + PRKCZ chr1 2066701 + Exonic hg19 LIHC TCGA-DD-A11D-01A 8 20 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p36.33 Seq+ 33392 ChimerSeq STARFusion TCGA_RNA-Seq MYLIP-KHDC1L MYLIP chr6 16130978 + KHDC1L chr6 73935144 - Exonic hg19 LIHC TCGA-DD-A11D-01A 3 4 CDS-5'UTR Intra-chr p22.3 q13 Seq+ 33393 ChimerSeq STARFusion TCGA_RNA-Seq RARS2-IP6K3 RARS2 chr6 88299640 - IP6K3 chr6 33707038 - Exonic hg19 LIHC TCGA-DD-A11D-01A 2 4 CDS-5'UTR Intra-chr q15 p21.31 Seq+ 33394 ChimerSeq STARFusion TCGA_RNA-Seq RARS2-IP6K3 RARS2 chr6 88299640 - IP6K3 chr6 33703432 - Exonic hg19 LIHC TCGA-DD-A11D-01A 2 4 CDS-5'UTR Intra-chr q15 p21.31 Seq+ 33395 ChimerSeq STARFusion TCGA_RNA-Seq PARD3-HP PARD3 chr10 34648170 - HP chr16 72090058 + Exonic hg19 LIHC TCGA-G3-A3CK-01A 4 1 Out-of-frame Inter-chr p11.21 q22.2 Tumor suppressor gene 33396 ChimerSeq STARFusion TCGA_RNA-Seq DAP-CTNND2 DAP chr5 10748287 - CTNND2 chr5 11732384 - Exonic hg19 LIHC TCGA-DD-AAVV 13 55 Out-of-frame Intra-chr p15.2 p15.2 Seq+ 33397 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2B-NUP214 PRRC2B chr9 134354780 + NUP214 chr9 134103547 + Exonic hg19 LIHC TCGA-DD-AAVV 3 3 In-Frame Intra-chr q34.13 q34.13 Oncogene Seq+ 33398 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-ALB RNA45S5 chrUn_gl000220 116454 + ALB chr4 74283983 + Exonic hg19 LIHC TCGA-RC-A7S9-01A 3 64 Out-of-frame Inter-chr q13.3 33399 ChimerSeq STARFusion TCGA_RNA-Seq APOA1-FARP1 APOA1 chr11 116706808 - FARP1 chr13 99087897 + Exonic hg19 LIHC TCGA-RC-A7S9-01A 4 1 Out-of-frame Inter-chr q23.3 q32.2 33400 ChimerSeq STARFusion TCGA_RNA-Seq TM2D2-IDO2 TM2D2 chr8 38853732 - IDO2 chr8 39871084 + Exonic hg19 LIHC TCGA-CC-A9FU-01A 8 59 In-Frame Intra-chr p11.22 p11.21 Seq+ 33401 ChimerSeq STARFusion TCGA_RNA-Seq RFC1-CORIN RFC1 chr4 39343965 - CORIN chr4 47682268 - Exonic hg19 LIHC TCGA-CC-A9FU-01A 8 48 In-Frame Intra-chr p14 p12 Seq+ 33402 ChimerSeq STARFusion TCGA_RNA-Seq TM2D2-IDO2 TM2D2 chr8 38853938 - IDO2 chr8 39871084 + Exonic hg19 LIHC TCGA-CC-A9FU-01A 5 59 5'UTR-CDS Intra-chr p11.22 p11.21 Seq+ 33403 ChimerSeq STARFusion TCGA_RNA-Seq RFC1-CORIN RFC1 chr4 39343965 - CORIN chr4 47680071 - Exonic hg19 LIHC TCGA-CC-A9FU-01A 7 48 In-Frame Intra-chr p14 p12 Seq+ 33404 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7B-L3MBTL2 ZC3H7B chr22 41697776 + L3MBTL2 chr22 41615423 + Exonic hg19 LIHC TCGA-CC-A9FU-01A 3 60 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 33405 ChimerSeq STARFusion TCGA_RNA-Seq GNG10-TRIM37 GNG10 chr9 114429226 + TRIM37 chr17 57060282 - Exonic hg19 LIHC TCGA-CC-A9FU-01A 2 1 3'UTR-CDS Inter-chr q31.3 q22 33406 ChimerSeq STARFusion TCGA_RNA-Seq TFRC-EBNA1BP2 TFRC chr3 195787051 - EBNA1BP2 chr1 43727589 - Exonic hg19 LIHC TCGA-WJ-A86L 72 39 CDS-5'UTR Inter-chr q29 p34.2 Seq+ 33407 ChimerSeq STARFusion TCGA_RNA-Seq CPS1-PLCD4 CPS1 chr2 211444494 + PLCD4 chr2 219480430 + Exonic hg19 LIHC TCGA-WJ-A86L 5 24 CDS-5'UTR Intra-chr q34 q35 Seq+ 33408 ChimerSeq STARFusion TCGA_RNA-Seq PAPSS2-PTEN PAPSS2 chr10 89419765 + PTEN chr10 89717610 + Exonic hg19 LIHC TCGA-WJ-A86L 3 32 Out-of-frame Intra-chr q23.2 q23.31 Oncogene Tumor suppressor gene Seq+ 33409 ChimerSeq STARFusion TCGA_RNA-Seq PITPNM2-SBNO1 PITPNM2 chr12 123468545 - SBNO1 chr12 123777114 - Exonic hg19 LIHC TCGA-WJ-A86L 4 10 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 33410 ChimerSeq STARFusion TCGA_RNA-Seq GPAM-GUCY2GP GPAM chr10 113931940 - GUCY2GP chr10 114098944 - Exonic hg19 LIHC TCGA-WJ-A86L 3 4 CDS-3'UTR Intra-chr q25.2 q25.2 Seq+ 33411 ChimerSeq STARFusion TCGA_RNA-Seq LDLRAD1-TMEM59 LDLRAD1 chr1 54475955 - TMEM59 chr1 54497978 - Exonic hg19 LIHC TCGA-WJ-A86L 3 4 Out-of-frame Intra-chr p32.3 p32.3 Seq+ 33412 ChimerSeq STARFusion TCGA_RNA-Seq KIF13B-SMTN KIF13B chr8 28929137 - SMTN chr22 31483951 + Exonic hg19 LIHC TCGA-G3-A25Y-01A 4 20 Out-of-frame Inter-chr p12 q12.2 Seq+ 33413 ChimerSeq STARFusion TCGA_RNA-Seq IGF2-CTDSP2 IGF2 chr11 2152509 - CTDSP2 chr12 58215874 - Exonic hg19 LIHC TCGA-G3-A25Y-01A 3 1 Out-of-frame Inter-chr p15.5 Oncogene q14.1 33414 ChimerSeq STARFusion TCGA_RNA-Seq PREX2-C8orf34 PREX2 chr8 69069671 + C8orf34 chr8 69350081 + Exonic hg19 LIHC TCGA-DD-A1EL-01A 7 53 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 33415 ChimerSeq STARFusion TCGA_RNA-Seq PREX2-C8orf34 PREX2 chr8 69069671 + C8orf34 chr8 69351734 + Exonic hg19 LIHC TCGA-DD-A1EL-01A 3 53 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 33416 ChimerSeq STARFusion TCGA_RNA-Seq ANKAR-MFSD6 ANKAR chr2 190561095 + MFSD6 chr2 191353383 + Exonic hg19 LIHC TCGA-DD-A1EL-01A 2 12 In-Frame Intra-chr q32.2 q32.2 Seq+ 33417 ChimerSeq STARFusion TCGA_RNA-Seq RBFOX2-FAM86A RBFOX2 chr22 36424288 - FAM86A chr16 5135733 - Exonic hg19 LIHC TCGA-LG-A9QC-01A 10 31 Out-of-frame Inter-chr Seq+ 33418 ChimerSeq STARFusion TCGA_RNA-Seq PPL-APOL3 PPL chr16 4938979 - APOL3 chr22 36538106 - Exonic hg19 LIHC TCGA-LG-A9QC-01A 2 6 Out-of-frame Inter-chr p13.3 q12.3 Seq+ 33419 ChimerSeq STARFusion TCGA_RNA-Seq PRKCA-EFNA3 PRKCA chr17 64302245 + EFNA3 chr1 155057567 + Exonic hg19 LIHC TCGA-LG-A9QC-01A 2 5 Out-of-frame Inter-chr q24.2 q21.3 Seq+ 33420 ChimerSeq STARFusion TCGA_RNA-Seq UIMC1-TRIM41 UIMC1 chr5 176433651 - TRIM41 chr5 180657744 + Exonic hg19 LIHC TCGA-LG-A9QC-01A 2 1 5'UTR-5'UTR Intra-chr q35.2 Tumor suppressor gene q35.3 33421 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-PPP1R1B ERBB2 chr17 37883800 + PPP1R1B chr17 37791860 + Exonic hg19 LIHC TCGA-KR-A7K2-01A 8 21 In-Frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 33422 ChimerSeq STARFusion TCGA_RNA-Seq FASN-CCDC57 FASN chr17 80041648 - CCDC57 chr17 80059742 - Exonic hg19 LIHC TCGA-FV-A2QR-01A 6 37 In-Frame Intra-chr q25.3 q25.3 Seq+ 33423 ChimerSeq STARFusion TCGA_RNA-Seq CUEDC2-ARL3 CUEDC2 chr10 104192283 - ARL3 chr10 104465246 - Exonic hg19 LIHC TCGA-5R-AA1C 4 9 5'UTR-CDS Intra-chr q24.32 q24.32 Seq+ 33424 ChimerSeq STARFusion TCGA_RNA-Seq C22orf39-GNB1L C22orf39 chr22 19434901 - GNB1L chr22 19789739 - Exonic hg19 LIHC TCGA-FV-A4ZP-01A 4 1 In-Frame Intra-chr q11.21 q11.21 Seq+ 33425 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-PRSS3 RNA45S5 chrUn_gl000220 110065 + PRSS3 chr9 33799177 + Exonic hg19 LIHC TCGA-FV-A4ZP-01A 3 3 Out-of-frame Inter-chr p13.3 33426 ChimerSeq STARFusion TCGA_RNA-Seq SRSF1-SUCLG1 SRSF1 chr17 56083704 - SUCLG1 chr2 84658783 - Exonic hg19 LIHC TCGA-FV-A4ZP-01A 2 1 In-Frame Inter-chr q22 p11.2 33427 ChimerSeq STARFusion TCGA_RNA-Seq TMED10-MRPL48 TMED10 chr14 75643058 - MRPL48 chr11 73555852 + Exonic hg19 LIHC TCGA-DD-A11C-01A 225 751 In-Frame Inter-chr q24.3 q13.4 Seq+ 33428 ChimerSeq STARFusion TCGA_RNA-Seq EPHX1-RAD51B EPHX1 chr1 226032324 + RAD51B chr14 69061202 + Exonic hg19 LIHC TCGA-DD-A11C-01A 27 90 Out-of-frame Inter-chr q42.12 q24.1 Seq+ 33429 ChimerSeq STARFusion TCGA_RNA-Seq LMBRD2-NADKD1 LMBRD2 chr5 36151658 - NADKD1 chr5 36207367 - Exonic hg19 LIHC TCGA-DD-A11C-01A 7 18 5'UTR-CDS Intra-chr p13.2 Seq+ 33430 ChimerSeq STARFusion TCGA_RNA-Seq STXBP2-TRIM4 STXBP2 chr19 7704693 + TRIM4 chr7 99490369 - Exonic hg19 LIHC TCGA-DD-A11C-01A 4 15 Out-of-frame Inter-chr p13.2 q22.1 Seq+ 33431 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-NLRC3 CREBBP chr16 3817721 - NLRC3 chr16 3598753 - Exonic hg19 LIHC TCGA-DD-A11C-01A 4 11 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 33432 ChimerSeq STARFusion TCGA_RNA-Seq STXBP2-TRIM4 STXBP2 chr19 7705889 + TRIM4 chr7 99490369 - Exonic hg19 LIHC TCGA-DD-A11C-01A 3 15 Out-of-frame Inter-chr p13.2 q22.1 Seq+ 33433 ChimerSeq STARFusion TCGA_RNA-Seq XRCC6-ACO2 XRCC6 chr22 42024234 + ACO2 chr22 41916175 + Exonic hg19 LIHC TCGA-DD-A11C-01A 2 16 CDS-5'UTR Intra-chr q13.2 q13.2 Seq+ 33434 ChimerSeq STARFusion TCGA_RNA-Seq RNF213-HSD17B14 RNF213 chr17 78286967 + HSD17B14 chr19 49318398 - Exonic hg19 LIHC TCGA-DD-A11C-01A 5 2 In-Frame Inter-chr q25.3 Oncogene q13.33 Seq+ 33435 ChimerSeq STARFusion TCGA_RNA-Seq FRMD8-DPF2 FRMD8 chr11 65172539 + DPF2 chr11 65119154 + Exonic hg19 LIHC TCGA-DD-A11C-01A 3 9 In-Frame Intra-chr q13.1 q13.1 Seq+ 33436 ChimerSeq STARFusion TCGA_RNA-Seq CUL4B-DAPK2 CUL4B chrX 119691779 - DAPK2 chr15 64275953 - Exonic hg19 LIHC TCGA-DD-A11C-01A 3 5 Out-of-frame Inter-chr q24 q22.31 CAMK:DAPK Tumor suppressor gene Seq+ 33437 ChimerSeq STARFusion TCGA_RNA-Seq EIF2B2-YLPM1 EIF2B2 chr14 75473417 + YLPM1 chr14 75301968 + Exonic hg19 LIHC TCGA-DD-A11C-01A 2 5 In-Frame Intra-chr q24.3 q24.3 Seq+ 33438 ChimerSeq STARFusion TCGA_RNA-Seq CTNNBIP1-DSTYK CTNNBIP1 chr1 9970153 - DSTYK chr1 205119922 - Exonic hg19 LIHC TCGA-DD-A11C-01A 2 0 5'UTR-CDS Intra-chr p36.22 Tumor suppressor gene q32.1 33439 ChimerSeq STARFusion TCGA_RNA-Seq CLIC4-CCDC28B CLIC4 chr1 25072116 + CCDC28B chr1 32667514 + Exonic hg19 LIHC TCGA-DD-A39V-01A 72 233 CDS-5'UTR Intra-chr p36.11 p35.2 Seq+ 33440 ChimerSeq STARFusion TCGA_RNA-Seq EHBP1-COMMD1 EHBP1 chr2 63223901 + COMMD1 chr2 62362966 + Exonic hg19 LIHC TCGA-DD-A3A5-01A 122 424 Out-of-frame Intra-chr p15 p15 Seq+ 33441 ChimerSeq STARFusion TCGA_RNA-Seq FTCD-SPATC1L FTCD chr21 47574063 - SPATC1L chr21 47588572 - Exonic hg19 LIHC TCGA-DD-A3A5-01A 27 71 Out-of-frame Intra-chr Seq+ 33442 ChimerSeq STARFusion TCGA_RNA-Seq HMGCS1-SLC38A9 HMGCS1 chr5 43292576 - SLC38A9 chr5 54965707 - Exonic hg19 LIHC TCGA-DD-A3A5-01A 21 61 In-Frame Intra-chr p12 q11.2 Seq+ 33443 ChimerSeq STARFusion TCGA_RNA-Seq FTCD-SPATC1L FTCD chr21 47572821 - SPATC1L chr21 47588572 - Exonic hg19 LIHC TCGA-DD-A3A5-01A 4 71 Out-of-frame Intra-chr Seq+ 33444 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT1-BAG1 B4GALT1 chr9 33166756 - BAG1 chr9 33262828 - Exonic hg19 LIHC TCGA-DD-A3A5-01A 8 47 In-Frame Intra-chr p21.1 p13.3 Seq+ 33445 ChimerSeq STARFusion TCGA_RNA-Seq KNG1-FETUB KNG1 chr3 186435526 + FETUB chr3 186364037 + Exonic hg19 LIHC TCGA-DD-A3A5-01A 2 11 In-Frame Intra-chr q27.3 q27.3 33446 ChimerSeq STARFusion TCGA_RNA-Seq DPP4-THSD7B DPP4 chr2 162929909 - THSD7B chr2 137813990 + Exonic hg19 LIHC TCGA-DD-A3A5-01A 2 5 Out-of-frame Intra-chr q24.2 Tumor suppressor gene q22.1 Seq+ 33447 ChimerSeq STARFusion TCGA_RNA-Seq UBA6-CCNA2 UBA6 chr4 68562363 - CCNA2 chr4 122742246 - Exonic hg19 LIHC TCGA-DD-A3A5-01A 2 3 Out-of-frame Intra-chr q13.2 q27 Seq+ 33448 ChimerSeq STARFusion TCGA_RNA-Seq UBA6-CCNA2 UBA6 chr4 68566767 - CCNA2 chr4 122742246 - Exonic hg19 LIHC TCGA-DD-A3A5-01A 2 3 Out-of-frame Intra-chr q13.2 q27 Seq+ 33449 ChimerSeq STARFusion TCGA_RNA-Seq TTC4-ACOT11 TTC4 chr1 55203337 + ACOT11 chr1 55066942 + Exonic hg19 LIHC TCGA-DD-A3A5-01A 2 2 In-Frame Intra-chr p32.3 Tumor suppressor gene p32.3 33450 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS6-PPP6R3 TMPRSS6 chr22 37499256 - PPP6R3 chr11 68377372 + Exonic hg19 LIHC TCGA-2Y-A9H2-01A 5 111 Out-of-frame Inter-chr q12.3 Tumor suppressor gene q13.2 Seq+ 33451 ChimerSeq STARFusion TCGA_RNA-Seq NUMA1-CADM2 NUMA1 chr11 71791504 - CADM2 chr3 86114755 + Exonic hg19 LIHC TCGA-2Y-A9H2-01A 6 12 5'UTR-CDS Inter-chr q13.4 Oncogene p12.1 Tumor suppressor gene Seq+ 33452 ChimerSeq STARFusion TCGA_RNA-Seq NADSYN1-PAK1 NADSYN1 chr11 71169590 + PAK1 chr11 77103586 - Exonic hg19 LIHC TCGA-2Y-A9H2-01A 2 7 CDS-5'UTR Intra-chr q13.4 q14.1 STE:STE20 Seq+ 33453 ChimerSeq STARFusion TCGA_RNA-Seq VWA9-SERPINA1 VWA9 chr15 65903575 - SERPINA1 chr14 94844974 - Exonic hg19 LIHC TCGA-CC-5261-01A 7 0 Out-of-frame Inter-chr q32.13 33454 ChimerSeq STARFusion TCGA_RNA-Seq MUM1-ALB MUM1 chr19 1360825 + ALB chr4 74283802 + Exonic hg19 LIHC TCGA-CC-5261-01A 6 1 Out-of-frame Inter-chr p13.3 Tumor suppressor gene q13.3 33455 ChimerSeq STARFusion TCGA_RNA-Seq ALB-COL6A3 ALB chr4 74283386 + COL6A3 chr2 238283283 - Exonic hg19 LIHC TCGA-CC-5261-01A 5 3 Out-of-frame Inter-chr q13.3 q37.3 33456 ChimerSeq STARFusion TCGA_RNA-Seq TJP3-ALB TJP3 chr19 3708418 + ALB chr4 74276027 + Exonic hg19 LIHC TCGA-CC-5261-01A 4 1 Out-of-frame Inter-chr p13.3 q13.3 33457 ChimerSeq STARFusion TCGA_RNA-Seq STAU1-UBE2W STAU1 chr20 47804653 - UBE2W chr8 74742707 - Exonic hg19 LIHC TCGA-CC-5261-01A 3 1 5'UTR-CDS Inter-chr q13.13 q21.11 33458 ChimerSeq STARFusion TCGA_RNA-Seq PLAC9-LOC389033 PLAC9 chr10 81904099 + LOC389033 chr2 130681254 - Exonic hg19 LIHC TCGA-DD-A3A6-01A 2 1 CDS-3'UTR Inter-chr q22.3 33459 ChimerSeq STARFusion TCGA_RNA-Seq RORA-ANXA2 RORA chr15 61521252 - ANXA2 chr15 60678285 - Exonic hg19 LIHC TCGA-CC-A3MB-01A 16 27 In-Frame Intra-chr q22.2 Transcription factor q22.2 Seq+ 33460 ChimerSeq STARFusion TCGA_RNA-Seq GLTSCR2-LOC440311 GLTSCR2 chr19 48258140 + LOC440311 chr15 95399747 + Exonic hg19 LIHC TCGA-CC-A3MB-01A 17 9 Out-of-frame Inter-chr Tumor suppressor gene 33461 ChimerSeq STARFusion TCGA_RNA-Seq RORA-ANXA2P2 RORA chr15 61521252 - ANXA2P2 chr9 33624261 + Exonic hg19 LIHC TCGA-CC-A3MB-01A 3 10 CDS-5'UTR Inter-chr q22.2 Transcription factor p13.3 33462 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF3-HSCB ZNRF3 chr22 29383189 + HSCB chr22 29153066 + Exonic hg19 LIHC TCGA-DD-AACY 43 115 Out-of-frame Intra-chr q12.1 q12.1 33463 ChimerSeq STARFusion TCGA_RNA-Seq NFIC-DDX11L2 NFIC chr19 3382241 + DDX11L2 chr2 114359006 - Exonic hg19 LIHC TCGA-RC-A7SK-01A 4 12 CDS-3'UTR Inter-chr p13.3 Transcription factor q14.1 33464 ChimerSeq STARFusion TCGA_RNA-Seq RBCK1-TRIB3 RBCK1 chr20 398574 + TRIB3 chr20 368655 + Exonic hg19 LIHC TCGA-RC-A7SK-01A 4 4 CDS-5'UTR Intra-chr p13 Transcription factor p13 Seq+ 33465 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L2-GAPVD1 NFE2L2 chr2 178097120 - GAPVD1 chr9 128083712 + Exonic hg19 LIHC TCGA-DD-AACU 2 5 In-Frame Inter-chr q31.2 Oncogene Transcription factor q33.3 Seq+ 33466 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 LIHC TCGA-DD-AACJ 14 0 Out-of-frame Inter-chr q13.33 p21.1 33467 ChimerSeq STARFusion TCGA_RNA-Seq SMURF1-CDRT15L2 SMURF1 chr7 98741349 - CDRT15L2 chr17 20483462 + Exonic hg19 LIHC TCGA-DD-AACH 8 15 In-Frame Inter-chr p11.2 Seq+ 33468 ChimerSeq STARFusion TCGA_RNA-Seq SMURF1-CDRT15L2 SMURF1 chr7 98678698 - CDRT15L2 chr17 20483462 + Exonic hg19 LIHC TCGA-DD-AACH 8 15 Out-of-frame Inter-chr p11.2 Seq+ 33469 ChimerSeq STARFusion TCGA_RNA-Seq NBR2-ECH1 NBR2 chr17 41277787 + ECH1 chr19 39308215 - Exonic hg19 LIHC TCGA-DD-AACN 2 1 5'UTR-CDS Inter-chr q21.31 33470 ChimerSeq STARFusion TCGA_RNA-Seq CEP85-CLIC4 CEP85 chr1 26566329 + CLIC4 chr1 25166351 + Exonic hg19 LIHC TCGA-DD-AACD 7 6 In-Frame Intra-chr p36.11 p36.11 Seq+ 33471 ChimerSeq STARFusion TCGA_RNA-Seq POM121C-PMS2P2 POM121C chr7 75103970 - PMS2P2 chr7 74973330 - Exonic hg19 LIHC TCGA-DD-AACD 6 4 Out-of-frame Intra-chr q11.23 q11.23 33472 ChimerSeq STARFusion TCGA_RNA-Seq TIPARP-LEKR1 TIPARP chr3 156413814 + LEKR1 chr3 156606086 + Exonic hg19 LIHC TCGA-DD-AACD 4 6 Out-of-frame Intra-chr q25.31 q25.31 Seq+ 33473 ChimerSeq STARFusion TCGA_RNA-Seq TCF25-ZC3H18 TCF25 chr16 89967202 + ZC3H18 chr16 88697897 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 24 148 CDS-3'UTR Intra-chr q24.3 q24.2 Seq+ 33474 ChimerSeq STARFusion TCGA_RNA-Seq WWP1-LRRCC1 WWP1 chr8 87355159 + LRRCC1 chr8 86053617 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 21 23 5'UTR-CDS Intra-chr q21.3 q21.2 Seq+ 33475 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-QRICH1 MAP4 chr3 47956307 - QRICH1 chr3 49068077 - Exonic hg19 LIHC TCGA-EP-A2KA-01A 10 51 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 33476 ChimerSeq STARFusion TCGA_RNA-Seq RPL22-RNF207 RPL22 chr1 6252990 - RNF207 chr1 6278349 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 13 36 In-Frame Intra-chr p36.31 p36.31 Seq+ 33477 ChimerSeq STARFusion TCGA_RNA-Seq MTMR3-TSHZ2 MTMR3 chr22 30279348 + TSHZ2 chr20 52103683 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 15 23 5'UTR-3'UTR Inter-chr q12.2 q13.2 Transcription factor Seq+ 33478 ChimerSeq STARFusion TCGA_RNA-Seq UTRN-AIG1 UTRN chr6 144860579 + AIG1 chr6 143457972 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 6 43 In-Frame Intra-chr q24.2 q24.2 Seq+ 33479 ChimerSeq STARFusion TCGA_RNA-Seq ST7-FOXP2 ST7 chr7 116593745 + FOXP2 chr7 114066557 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 10 23 CDS-5'UTR Intra-chr q31.2 Tumor suppressor gene q31.1 Transcription factor Seq+ 33480 ChimerSeq STARFusion TCGA_RNA-Seq UBE2D2-CTNNA1 UBE2D2 chr5 138980020 + CTNNA1 chr5 138221901 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 6 39 Out-of-frame Intra-chr q31.2 q31.2 Oncogene Seq+ 33481 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP19-RRP12 ARHGAP19 chr10 99016075 - RRP12 chr10 99126889 - Exonic hg19 LIHC TCGA-EP-A2KA-01A 6 17 In-Frame Intra-chr q24.1 q24.1 Seq+ 33482 ChimerSeq STARFusion TCGA_RNA-Seq RBFOX2-RAC2 RBFOX2 chr22 36205827 - RAC2 chr22 37622843 - Exonic hg19 LIHC TCGA-EP-A2KA-01A 6 15 Out-of-frame Intra-chr q13.1 Seq+ 33483 ChimerSeq STARFusion TCGA_RNA-Seq STK19-LY6G6D STK19 chr6_qbl_hap6 3241120 + LY6G6D chr6_qbl_hap6 2976918 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 9 3 Out-of-frame Intra-chr Seq+ 33484 ChimerSeq STARFusion TCGA_RNA-Seq VPS53-SMG6 VPS53 chr17 600658 - SMG6 chr17 1989195 - Exonic hg19 LIHC TCGA-EP-A2KA-01A 8 6 In-Frame Intra-chr Tumor suppressor gene p13.3 Seq+ 33485 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R5C-CCDC28B PPP2R5C chr14 102360897 + CCDC28B chr1 32667514 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 6 7 CDS-5'UTR Inter-chr q32.31 Tumor suppressor gene p35.2 Seq+ 33486 ChimerSeq STARFusion TCGA_RNA-Seq KDM4C-INSL4 KDM4C chr9 6814745 + INSL4 chr9 5233654 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 2 19 Out-of-frame Intra-chr p24.1 p24.1 Seq+ 33487 ChimerSeq STARFusion TCGA_RNA-Seq BAZ1B-MLXIPL BAZ1B chr7 72873866 - MLXIPL chr7 73014025 - Exonic hg19 LIHC TCGA-EP-A2KA-01A 2 18 Out-of-frame Intra-chr q11.23 q11.23 Transcription factor Seq+ 33488 ChimerSeq STARFusion TCGA_RNA-Seq AATF-LIG3 AATF chr17 35348156 + LIG3 chr17 33325623 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 2 14 In-Frame Intra-chr q12 Tumor suppressor gene Seq+ 33489 ChimerSeq STARFusion TCGA_RNA-Seq TXNDC15-LEAP2 TXNDC15 chr5 134210220 + LEAP2 chr5 132209642 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 3 10 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 33490 ChimerSeq STARFusion TCGA_RNA-Seq GTPBP1-CDC42EP1 GTPBP1 chr22 39102152 + CDC42EP1 chr22 37962079 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 3 9 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 33491 ChimerSeq STARFusion TCGA_RNA-Seq CTIF-C18orf25 CTIF chr18 46197115 + C18orf25 chr18 43833663 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 3 7 Out-of-frame Intra-chr q21.1 Seq+ 33492 ChimerSeq STARFusion TCGA_RNA-Seq KIF23-PIAS1 KIF23 chr15 69721552 + PIAS1 chr15 68479880 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 3 7 Out-of-frame Intra-chr q23 q23 Tumor suppressor gene Seq+ 33493 ChimerSeq STARFusion TCGA_RNA-Seq TTN-SERPINA1 TTN chr2 179529446 - SERPINA1 chr14 94844976 - Exonic hg19 LIHC TCGA-EP-A2KA-01A 4 1 Out-of-frame Inter-chr q31.2 CAMK:MLCK q32.13 33494 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC17-PPP2R5C ZCCHC17 chr1 31792013 + PPP2R5C chr14 102360844 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 3 5 Out-of-frame Inter-chr p35.2 q32.31 Tumor suppressor gene Seq+ 33495 ChimerSeq STARFusion TCGA_RNA-Seq DNMT3A-HADHA DNMT3A chr2 25475063 - HADHA chr2 26438044 - Exonic hg19 LIHC TCGA-EP-A2KA-01A 2 7 In-Frame Intra-chr p23.3 Oncogene Tumor suppressor gene p23.3 Seq+ 33496 ChimerSeq STARFusion TCGA_RNA-Seq PCCA-FARP1 PCCA chr13 100809594 + FARP1 chr13 98996016 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 2 7 In-Frame Intra-chr q32.3 q32.2 Seq+ 33497 ChimerSeq STARFusion TCGA_RNA-Seq CPN1-ACTR1A CPN1 chr10 101823371 - ACTR1A chr10 104245490 - Exonic hg19 LIHC TCGA-EP-A2KA-01A 2 6 Out-of-frame Intra-chr q24.2 q24.32 Seq+ 33498 ChimerSeq STARFusion TCGA_RNA-Seq WDR55-PAIP2 WDR55 chr5 140044688 + PAIP2 chr5 138699448 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 2 6 CDS-5'UTR Intra-chr q31.3 q31.2 Tumor suppressor gene Seq+ 33499 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L2-SP100 DIS3L2 chr2 232826475 + SP100 chr2 231307652 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 3 1 5'UTR-CDS Intra-chr q37.1 q37.1 Tumor suppressor gene Transcription factor Seq+ 33500 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-EIF3D MYH9 chr22 36783852 - EIF3D chr22 36915584 - Exonic hg19 LIHC TCGA-EP-A2KA-01A 2 5 5'UTR-CDS Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 KB Pub Seq+ 33501 ChimerSeq STARFusion TCGA_RNA-Seq ACAP2-DLG1 ACAP2 chr3 195112819 - DLG1 chr3 196778539 - Exonic hg19 LIHC TCGA-EP-A2KA-01A 2 4 Out-of-frame Intra-chr q29 q29 Tumor suppressor gene Seq+ 33502 ChimerSeq STARFusion TCGA_RNA-Seq MGMT-DOCK1 MGMT chr10 131334641 + DOCK1 chr10 129237291 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 2 4 In-Frame Intra-chr q26.3 q26.2 Seq+ 33503 ChimerSeq STARFusion TCGA_RNA-Seq PCCA-CLYBL PCCA chr13 100764315 + CLYBL chr13 100425078 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 2 3 Out-of-frame Intra-chr q32.3 q32.3 Seq+ 33504 ChimerSeq STARFusion TCGA_RNA-Seq SIL1-NRG2 SIL1 chr5 138286860 - NRG2 chr5 139267096 - Exonic hg19 LIHC TCGA-EP-A2KA-01A 2 2 Out-of-frame Intra-chr q31.2 q31.2 Seq+ 33505 ChimerSeq STARFusion TCGA_RNA-Seq CAMK1D-PROSER2 CAMK1D chr10 12391909 + PROSER2 chr10 11893996 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 2 1 Out-of-frame Intra-chr p13 p14 Seq+ 33506 ChimerSeq STARFusion TCGA_RNA-Seq DOT1L-GNA11 DOT1L chr19 2227126 + GNA11 chr19 3118922 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 2 1 Out-of-frame Intra-chr p13.3 Oncogene Transcription factor p13.3 Oncogene 33507 ChimerSeq STARFusion TCGA_RNA-Seq PSMA3-ACTR10 PSMA3 chr14 58714550 + ACTR10 chr14 58697117 + Exonic hg19 LIHC TCGA-BC-A216-01A 30 248 In-Frame Intra-chr q23.1 q23.1 Seq+ 33508 ChimerSeq STARFusion TCGA_RNA-Seq LRP6-MANSC1 LRP6 chr12 12397196 - MANSC1 chr12 12483892 - Exonic hg19 LIHC TCGA-BC-A216-01A 15 28 Out-of-frame Intra-chr Seq+ 33509 ChimerSeq STARFusion TCGA_RNA-Seq CTNNA1-MATR3 CTNNA1 chr5 138223331 + MATR3 chr5 138650364 + Exonic hg19 LIHC TCGA-BC-A216-01A 14 31 In-Frame Intra-chr q31.2 Oncogene q31.2 33510 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT3-RRP1 AGPAT3 chr21 45323900 + RRP1 chr21 45211231 + Exonic hg19 LIHC TCGA-BC-A216-01A 5 33 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 33511 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS6-MPST TMPRSS6 chr22 37491591 - MPST chr22 37420233 + Exonic hg19 LIHC TCGA-BC-A216-01A 3 22 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q12.3 Seq+ 33512 ChimerSeq STARFusion TCGA_RNA-Seq SORBS2-FAM53B SORBS2 chr4 186732818 - FAM53B chr10 126384781 - Exonic hg19 LIHC TCGA-BC-A216-01A 5 12 5'UTR-CDS Inter-chr q35.1 q26.13 Seq+ 33513 ChimerSeq STARFusion TCGA_RNA-Seq COG4-MTSS1L COG4 chr16 70514632 - MTSS1L chr16 70698079 - Exonic hg19 LIHC TCGA-BC-A216-01A 4 14 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 33514 ChimerSeq STARFusion TCGA_RNA-Seq WDR59-PTGES3L WDR59 chr16 75018862 - PTGES3L chr17 41123713 - Exonic hg19 LIHC TCGA-BC-A216-01A 3 10 Out-of-frame Inter-chr q23.1 q21.31 Seq+ 33515 ChimerSeq STARFusion TCGA_RNA-Seq TC2N-TRIP11 TC2N chr14 92280047 - TRIP11 chr14 92442533 - Exonic hg19 LIHC TCGA-BC-A216-01A 2 13 In-Frame Intra-chr q32.12 Oncogene Seq+ 33516 ChimerSeq STARFusion TCGA_RNA-Seq SOCS5-PRKCE SOCS5 chr2 46926588 + PRKCE chr2 46386745 + Exonic hg19 LIHC TCGA-BC-A216-01A 3 1 5'UTR-CDS Intra-chr p21 p21 Tumor suppressor gene 33517 ChimerSeq STARFusion TCGA_RNA-Seq UBAC2-CLYBL UBAC2 chr13 99970323 + CLYBL chr13 100425078 + Exonic hg19 LIHC TCGA-BC-A216-01A 2 5 Out-of-frame Intra-chr q32.3 q32.3 Seq+ 33518 ChimerSeq STARFusion TCGA_RNA-Seq ATOH8-LYG2 ATOH8 chr2 85991305 + LYG2 chr2 99863283 - Exonic hg19 LIHC TCGA-BC-A216-01A 2 2 Out-of-frame Intra-chr p11.2 Transcription factor q11.2 Seq+ 33519 ChimerSeq STARFusion TCGA_RNA-Seq PTPN11-RPL6 PTPN11 chr12 112884202 + RPL6 chr12 112843180 - Exonic hg19 LIHC TCGA-BC-4073-01B 71 59 Out-of-frame Intra-chr q24.13 Oncogene Tumor suppressor gene q24.13 Seq+ 33520 ChimerSeq STARFusion TCGA_RNA-Seq RORA-ANXA2 RORA chr15 61521252 - ANXA2 chr15 60678285 - Exonic hg19 LIHC TCGA-BC-4073-01B 13 27 In-Frame Intra-chr q22.2 Transcription factor q22.2 Seq+ 33521 ChimerSeq STARFusion TCGA_RNA-Seq PRLR-AGXT2 PRLR chr5 35230370 - AGXT2 chr5 35014224 - Exonic hg19 LIHC TCGA-BC-4073-01B 6 20 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 33522 ChimerSeq STARFusion TCGA_RNA-Seq PRLR-AGXT2 PRLR chr5 35230370 - AGXT2 chr5 35010254 - Exonic hg19 LIHC TCGA-BC-4073-01B 3 20 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 33523 ChimerSeq STARFusion TCGA_RNA-Seq CPT1A-ZNF705A CPT1A chr11 68609243 - ZNF705A chr12 8325151 + Exonic hg19 LIHC TCGA-BC-4073-01B 6 1 5'UTR-5'UTR Inter-chr q13.3 p13.31 Transcription factor 33524 ChimerSeq STARFusion TCGA_RNA-Seq ALB-SERPINC1 ALB chr4 74272478 + SERPINC1 chr1 173881035 - Exonic hg19 LIHC TCGA-BC-4073-01B 4 2 In-Frame Inter-chr q13.3 q25.1 33525 ChimerSeq STARFusion TCGA_RNA-Seq TTLL5-JDP2 TTLL5 chr14 76129566 + JDP2 chr14 75904601 + Exonic hg19 LIHC TCGA-BC-4073-01B 3 4 Out-of-frame Intra-chr q24.3 q24.3 Tumor suppressor gene Transcription factor Seq+ 33526 ChimerSeq STARFusion TCGA_RNA-Seq BORA-PIBF1 BORA chr13 73321249 + PIBF1 chr13 73572960 + Exonic hg19 LIHC TCGA-BC-4073-01B 2 7 In-Frame Intra-chr q21.33 q21.33 Seq+ 33527 ChimerSeq STARFusion TCGA_RNA-Seq COBLL1-GRB14 COBLL1 chr2 165697666 - GRB14 chr2 165404326 - Exonic hg19 LIHC TCGA-BC-4073-01B 3 3 Out-of-frame Intra-chr q24.3 q24.3 33528 ChimerSeq STARFusion TCGA_RNA-Seq ALB-RAB11FIP2 ALB chr4 74286964 + RAB11FIP2 chr10 119765284 - Exonic hg19 LIHC TCGA-BC-4073-01B 3 0 Out-of-frame Inter-chr q13.3 q26.11 33529 ChimerSeq STARFusion TCGA_RNA-Seq BRAP-ATXN2 BRAP chr12 112110465 - ATXN2 chr12 111902519 - Exonic hg19 LIHC TCGA-BC-4073-01B 2 3 Out-of-frame Intra-chr q24.12 q24.12 33530 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-NDUFV1 KDM2A chr11 66949363 + NDUFV1 chr11 67375867 + Exonic hg19 LIHC TCGA-DD-A4ND-01A 3 66 Out-of-frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 33531 ChimerSeq STARFusion TCGA_RNA-Seq CPT1A-PPFIA1 CPT1A chr11 68609243 - PPFIA1 chr11 70170508 + Exonic hg19 LIHC TCGA-DD-A4ND-01A 10 11 5'UTR-5'UTR Intra-chr q13.3 q13.3 Seq+ 33532 ChimerSeq STARFusion TCGA_RNA-Seq H19-CTIF H19 chr11 2017102 - CTIF chr18 46146087 + Exonic hg19 LIHC TCGA-DD-A4ND-01A 3 1 Out-of-frame Inter-chr p15.5 Tumor suppressor gene 33533 ChimerSeq STARFusion TCGA_RNA-Seq H19-FAM127A H19 chr11 2018692 - FAM127A chrX 134166542 + Exonic hg19 LIHC TCGA-DD-A4ND-01A 3 1 Out-of-frame Inter-chr p15.5 Tumor suppressor gene 33534 ChimerSeq STARFusion TCGA_RNA-Seq A2M-LOC440704 A2M chr12 9253740 - LOC440704 chr1 190760644 + Exonic hg19 LIHC TCGA-LG-A9QD-01A 2 8 CDS-5'UTR Inter-chr p13.31 33535 ChimerSeq STARFusion TCGA_RNA-Seq LOC100130000-LINC00623 LOC100130000 chr1 143687284 + LINC00623 chr1 144301538 - Exonic hg19 LIHC TCGA-ZP-A9D4-01A 4 1 Out-of-frame Intra-chr p11.2 33536 ChimerSeq STARFusion TCGA_RNA-Seq SPEN-FBLIM1 SPEN chr1 16203173 + FBLIM1 chr1 16101113 + Exonic hg19 LIHC TCGA-5C-AAPD 2 5 Out-of-frame Intra-chr p36.21 Transcription factor p36.21 Seq+ 33537 ChimerSeq STARFusion TCGA_RNA-Seq GSK3A-CNFN GSK3A chr19 42736209 - CNFN chr19 42893191 - Exonic hg19 LIHC TCGA-2V-A95S-01A 8 25 CDS-5'UTR Intra-chr q13.2 CMGC:GSK q13.2 Seq+ 33538 ChimerSeq STARFusion TCGA_RNA-Seq CDK10-TCF25 CDK10 chr16 89753205 + TCF25 chr16 89973651 + Exonic hg19 LIHC TCGA-UB-A7MD-01A 2 2 In-Frame Intra-chr q24.3 CMGC:CDK q24.3 33539 ChimerSeq STARFusion TCGA_RNA-Seq PPARA-RAB2A PPARA chr22 46547873 + RAB2A chr8 61531139 + Exonic hg19 LIHC TCGA-BC-A10X-01A 19 46 5'UTR-CDS Inter-chr q13.31 Tumor suppressor gene Transcription factor q12.1 Seq+ 33540 ChimerSeq STARFusion TCGA_RNA-Seq CACNA1D-IL17RB CACNA1D chr3 53535747 + IL17RB chr3 53898773 + Exonic hg19 LIHC TCGA-ED-A4XI-01A 5 21 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 33541 ChimerSeq STARFusion TCGA_RNA-Seq ITIH2-TAF3 ITIH2 chr10 7755248 + TAF3 chr10 8051041 + Exonic hg19 LIHC TCGA-ED-A4XI-01A 2 6 In-Frame Intra-chr p14 p14 Seq+ 33542 ChimerSeq STARFusion TCGA_RNA-Seq SIK2-PPP2R1B SIK2 chr11 111491126 + PPP2R1B chr11 111636108 - Exonic hg19 LIHC TCGA-ED-A4XI-01A 2 5 Out-of-frame Intra-chr q23.1 q23.1 Tumor suppressor gene 33543 ChimerSeq STARFusion TCGA_RNA-Seq ADCY9-PHF16 ADCY9 chr16 4163751 - PHF16 chrX 46844285 + Exonic hg19 LIHC TCGA-ED-A4XI-01A 2 4 CDS-5'UTR Inter-chr p13.3 Seq+ 33544 ChimerSeq STARFusion TCGA_RNA-Seq FTCD-GSTM2 FTCD chr21 47565331 - GSTM2 chr1 110213909 + Exonic hg19 LIHC TCGA-ED-A4XI-01A 2 0 In-Frame Inter-chr p13.3 33545 ChimerSeq STARFusion TCGA_RNA-Seq SFPQ-TFEB SFPQ chr1 35654604 - TFEB chr6 41658973 - Exonic hg19 LIHC TCGA-G3-A3CI-01A 12 35 CDS-5'UTR Inter-chr p34.3 p21.1 Transcription factor Seq+ 33546 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-LPPR3 SBNO2 chr19 1116020 - LPPR3 chr19 821585 - Exonic hg19 LIHC TCGA-BC-A5W4-01A 3 10 CDS-5'UTR Intra-chr p13.3 33547 ChimerSeq STARFusion TCGA_RNA-Seq LRPAP1-TMEM175 LRPAP1 chr4 3510912 - TMEM175 chr4 941497 + Exonic hg19 LIHC TCGA-BC-A5W4-01A 3 3 3'UTR-5'UTR Intra-chr p16.3 p16.3 Seq+ 33548 ChimerSeq STARFusion TCGA_RNA-Seq CLSTN3-C1S CLSTN3 chr12 7288987 + C1S chr12 7169056 + Exonic hg19 LIHC TCGA-ZP-A9CZ-01A 21 122 CDS-5'UTR Intra-chr p13.31 p13.31 Seq+ 33549 ChimerSeq STARFusion TCGA_RNA-Seq CLSTN3-C1S CLSTN3 chr12 7288987 + C1S chr12 7169143 + Exonic hg19 LIHC TCGA-ZP-A9CZ-01A 12 122 CDS-5'UTR Intra-chr p13.31 p13.31 Seq+ 33550 ChimerSeq STARFusion TCGA_RNA-Seq GTF2F2-GPC5 GTF2F2 chr13 45694856 + GPC5 chr13 92797083 + Exonic hg19 LIHC TCGA-ZP-A9CZ-01A 9 35 In-Frame Intra-chr q14.12 q31.3 Tumor suppressor gene Seq+ 33551 ChimerSeq STARFusion TCGA_RNA-Seq BCAR1-CFDP1 BCAR1 chr16 75276368 - CFDP1 chr16 75327940 - Exonic hg19 LIHC TCGA-CC-5263-01A 414 1026 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 33552 ChimerSeq STARFusion TCGA_RNA-Seq PFDN2-APOA2 PFDN2 chr1 161087742 - APOA2 chr1 161192840 - Exonic hg19 LIHC TCGA-CC-5263-01A 135 584 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 33553 ChimerSeq STARFusion TCGA_RNA-Seq OCLN-GPR98 OCLN chr5 68788486 + GPR98 chr5 90261232 + Exonic hg19 LIHC TCGA-CC-5263-01A 15 777 5'UTR-5'UTR Intra-chr q13.2 Seq+ 33554 ChimerSeq STARFusion TCGA_RNA-Seq PFDN2-APOA2 PFDN2 chr1 161087742 - APOA2 chr1 161192312 - Exonic hg19 LIHC TCGA-CC-5263-01A 27 584 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 33555 ChimerSeq STARFusion TCGA_RNA-Seq TMCO6-CYSTM1 TMCO6 chr5 140021365 + CYSTM1 chr5 139622890 + Exonic hg19 LIHC TCGA-CC-5263-01A 52 172 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 33556 ChimerSeq STARFusion TCGA_RNA-Seq CNN3-ALG14 CNN3 chr1 95392394 - ALG14 chr1 95448862 - Exonic hg19 LIHC TCGA-CC-5263-01A 37 169 In-Frame Intra-chr p21.3 p21.3 Seq+ 33557 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-FLOT2 FAM222B chr17 27161311 - FLOT2 chr17 27211333 - Exonic hg19 LIHC TCGA-CC-5263-01A 12 231 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 33558 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-FLOT2 FAM222B chr17 27169700 - FLOT2 chr17 27211333 - Exonic hg19 LIHC TCGA-CC-5263-01A 9 231 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 33559 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-FLOT2 FAM222B chr17 27169700 - FLOT2 chr17 27210249 - Exonic hg19 LIHC TCGA-CC-5263-01A 5 231 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 33560 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-FLOT2 FAM222B chr17 27161311 - FLOT2 chr17 27210249 - Exonic hg19 LIHC TCGA-CC-5263-01A 4 231 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 33561 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-FLOT2 FAM222B chr17 27161311 - FLOT2 chr17 27212965 - Exonic hg19 LIHC TCGA-CC-5263-01A 3 231 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 33562 ChimerSeq STARFusion TCGA_RNA-Seq CLMN-VTI1B CLMN chr14 95786048 - VTI1B chr14 68120215 - Exonic hg19 LIHC TCGA-CC-5263-01A 41 69 Out-of-frame Intra-chr q32.13 q24.1 Seq+ 33563 ChimerSeq STARFusion TCGA_RNA-Seq NIN-TPM1 NIN chr14 51297182 - TPM1 chr15 63349184 + Exonic hg19 LIHC TCGA-CC-5263-01A 30 32 5'UTR-CDS Inter-chr q22.1 Oncogene q22.2 Seq+ 33564 ChimerSeq STARFusion TCGA_RNA-Seq NECAB3-PXMP4 NECAB3 chr20 32257181 - PXMP4 chr20 32302542 - Exonic hg19 LIHC TCGA-CC-5263-01A 13 32 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 33565 ChimerSeq STARFusion TCGA_RNA-Seq ABL1-PRDM12 ABL1 chr9 133589842 + PRDM12 chr9 133553916 + Exonic hg19 LIHC TCGA-CC-5263-01A 10 32 Out-of-frame Intra-chr q34.12 TK:Abl Oncogene q34.12 Transcription factor Seq+ 33566 ChimerSeq STARFusion TCGA_RNA-Seq GPR126-VTA1 GPR126 chr6 142623468 + VTA1 chr6 142487365 + Exonic hg19 LIHC TCGA-CC-5263-01A 7 20 Out-of-frame Intra-chr q24.1 Seq+ 33567 ChimerSeq STARFusion TCGA_RNA-Seq BRCA1-BECN1 BRCA1 chr17 41209069 - BECN1 chr17 40968072 - Exonic hg19 LIHC TCGA-CC-5263-01A 5 11 Out-of-frame Intra-chr q21.31 Oncogene Tumor suppressor gene q21.31 Tumor suppressor gene Seq+ 33568 ChimerSeq STARFusion TCGA_RNA-Seq ZNF341-C20orf144 ZNF341 chr20 32319858 + C20orf144 chr20 32251338 + Exonic hg19 LIHC TCGA-CC-5263-01A 4 7 Out-of-frame Intra-chr q11.22 Transcription factor q11.22 Seq+ 33569 ChimerSeq STARFusion TCGA_RNA-Seq ENTHD2-SLC38A10 ENTHD2 chr17 79207232 - SLC38A10 chr17 79246427 - Exonic hg19 LIHC TCGA-CC-5263-01A 2 10 Out-of-frame Intra-chr q25.3 33570 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1598-PDZD8 KIAA1598 chr10 118738767 - PDZD8 chr10 119049859 - Exonic hg19 LIHC TCGA-CC-5263-01A 2 10 In-Frame Intra-chr q26.11 Seq+ 33571 ChimerSeq STARFusion TCGA_RNA-Seq GAPDH-H2AFV GAPDH chr12 6647351 + H2AFV chr7 44866840 - Exonic hg19 LIHC TCGA-CC-5263-01A 3 0 Out-of-frame Inter-chr p13.31 p13 33572 ChimerSeq STARFusion TCGA_RNA-Seq ZBED4-C7orf10 ZBED4 chr22 50247637 + C7orf10 chr7 40277234 + Exonic hg19 LUAD TCGA-38-4628-01A 6 31 5'UTR-CDS Inter-chr q13.33 Transcription factor Seq+ 33573 ChimerSeq STARFusion TCGA_RNA-Seq GRIP1-RPSAP52 GRIP1 chr12 66990627 - RPSAP52 chr12 66152811 - Exonic hg19 LUAD TCGA-38-4628-01A 6 18 CDS-3'UTR Intra-chr q14.3 q14.3 Seq+ 33574 ChimerSeq STARFusion TCGA_RNA-Seq ST7-MET ST7 chr7 116593745 + MET chr7 116339125 + Exonic hg19 LUAD TCGA-38-4628-01A 2 11 CDS-5'UTR Intra-chr q31.2 Tumor suppressor gene q31.2 TK:Met Oncogene Seq+ 33575 ChimerSeq STARFusion TCGA_RNA-Seq SAMM50-GBA3 SAMM50 chr22 44373838 + GBA3 chr4 22820344 + Exonic hg19 LUAD TCGA-38-4628-01A 3 6 Out-of-frame Inter-chr q13.31 p15.2 33576 ChimerSeq STARFusion TCGA_RNA-Seq EPHX1-FTL EPHX1 chr1 226026419 + FTL chr19 49468759 + Exonic hg19 LUAD TCGA-38-4628-01A 3 2 Out-of-frame Inter-chr q42.12 q13.33 33577 ChimerSeq STARFusion TCGA_RNA-Seq MPND-ZNF585A MPND chr19 4345978 + ZNF585A chr19 37656598 - Exonic hg19 LUAD TCGA-38-4628-01A 2 3 CDS-5'UTR Intra-chr p13.3 q13.12 Transcription factor Seq+ 33578 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-AHCY ANKRD11 chr16 89484692 - AHCY chr20 32883391 - Exonic hg19 LUAD TCGA-38-4628-01A 2 2 5'UTR-5'UTR Inter-chr q24.3 q11.22 33579 ChimerSeq STARFusion TCGA_RNA-Seq EML4-ALK EML4 chr2 42522656 + ALK chr2 29446394 - Exonic hg19 LUAD TCGA-78-7163-01A 27 64 In-Frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 33580 ChimerSeq STARFusion TCGA_RNA-Seq ENO1-RERE ENO1 chr1 8925344 - RERE chr1 8617582 - Exonic hg19 LUAD TCGA-78-7163-01A 7 35 Out-of-frame Intra-chr p36.23 p36.23 33581 ChimerSeq STARFusion TCGA_RNA-Seq LAMA3-GAREM LAMA3 chr18 21462009 + GAREM chr18 29850346 - Exonic hg19 LUAD TCGA-05-5425-01A 43 237 Out-of-frame Intra-chr q11.2 33582 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-LOC100507412 EGFR chr7 55087058 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LUAD TCGA-05-5425-01A 4 26 CDS-5'UTR Inter-chr p11.2 TK:EGFR Oncogene 33583 ChimerSeq STARFusion TCGA_RNA-Seq ACER3-PPME1 ACER3 chr11 76670075 + PPME1 chr11 73933357 + Exonic hg19 LUAD TCGA-05-5425-01A 4 15 In-Frame Intra-chr q13.5 q13.4 Seq+ 33584 ChimerSeq STARFusion TCGA_RNA-Seq TESC-ECHDC3 TESC chr12 117494611 - ECHDC3 chr10 11789348 + Exonic hg19 LUAD TCGA-05-5425-01A 2 7 In-Frame Inter-chr q24.22 p14 Seq+ 33585 ChimerSeq STARFusion TCGA_RNA-Seq HIF1A-PRKCH HIF1A chr14 62207906 + PRKCH chr14 61995793 + Exonic hg19 LUAD TCGA-44-2668-01A 13 50 In-Frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 Seq+ 33586 ChimerSeq STARFusion TCGA_RNA-Seq SNORA50-CNOT1 SNORA50 chr16 58593708 - CNOT1 chr16 58594266 - Exonic hg19 LUAD TCGA-44-2668-01A 4 8 3'UTR-CDS Intra-chr q23.3 q21 33587 ChimerSeq STARFusion TCGA_RNA-Seq RSBN1L-PTPN12 RSBN1L chr7 77398120 + PTPN12 chr7 77214860 + Exonic hg19 LUAD TCGA-44-2668-01A 2 1 Out-of-frame Intra-chr q11.23 q11.23 Tumor suppressor gene Seq+ 33588 ChimerSeq STARFusion TCGA_RNA-Seq PCNXL3-FRMD8 PCNXL3 chr11 65397964 + FRMD8 chr11 65179839 + Exonic hg19 LUAD TCGA-50-6592-01A 10 61 Out-of-frame Intra-chr q13.1 33589 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 58007535 + VMP1 chr17 57915656 + Exonic hg19 LUAD TCGA-50-6592-01A 11 56 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 33590 ChimerSeq STARFusion TCGA_RNA-Seq GTF2E2-GSR GTF2E2 chr8 30510950 - GSR chr8 30550572 - Exonic hg19 LUAD TCGA-50-6592-01A 5 38 Out-of-frame Intra-chr p12 p12 Seq+ 33591 ChimerSeq STARFusion TCGA_RNA-Seq ATP2C1-NEK11 ATP2C1 chr3 130660543 + NEK11 chr3 131068401 + Exonic hg19 LUAD TCGA-50-6592-01A 4 28 Out-of-frame Intra-chr q22.1 q22.1 Other:NEK Seq+ 33592 ChimerSeq STARFusion TCGA_RNA-Seq ERO1L-LOC100505782 ERO1L chr14 53124635 - LOC100505782 chr17 39568671 + Exonic hg19 LUAD TCGA-50-6592-01A 2 10 CDS-5'UTR Inter-chr 33593 ChimerSeq STARFusion TCGA_RNA-Seq ERCC3-MAP3K2 ERCC3 chr2 128038023 - MAP3K2 chr2 128072459 - Exonic hg19 LUAD TCGA-50-6592-01A 2 8 In-Frame Intra-chr q14.3 Oncogene q14.3 STE:STE11 Seq+ 33594 ChimerSeq STARFusion TCGA_RNA-Seq TMEM241-TEX101 TMEM241 chr18 20936558 - TEX101 chr19 43906918 + Exonic hg19 LUAD TCGA-50-6592-01A 2 0 CDS-5'UTR Inter-chr q11.2 q13.31 33595 ChimerSeq STARFusion TCGA_RNA-Seq RPL26-CYSTM1 RPL26 chr17 8285461 - CYSTM1 chr5 139574031 + Exonic hg19 LUAD TCGA-55-8207-01A 79 349 CDS-5'UTR Inter-chr p13.1 q31.3 Seq+ 33596 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 LUAD TCGA-55-8207-01A 2 4 3'UTR-5'UTR Intra-chr q34 33597 ChimerSeq STARFusion TCGA_RNA-Seq ELP3-PNOC ELP3 chr8 27965493 + PNOC chr8 28196557 + Exonic hg19 LUAD TCGA-MP-A4TE 16 87 In-Frame Intra-chr p21.1 p21.1 Seq+ 33598 ChimerSeq STARFusion TCGA_RNA-Seq DCLRE1B-DNAJB4 DCLRE1B chr1 114448397 + DNAJB4 chr1 78481698 + Exonic hg19 LUAD TCGA-MP-A4TE 4 14 In-Frame Intra-chr p13.2 p31.1 Tumor suppressor gene Seq+ 33599 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106209410 - Exonic hg19 LUAD TCGA-MP-A4TE 5 2 Out-of-frame Inter-chr q24.2 32.33 33600 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC9-KCNK9 TRAPPC9 chr8 141231558 - KCNK9 chr8 140631342 - Exonic hg19 LUAD TCGA-MP-A4TE 2 7 Out-of-frame Intra-chr q24.3 q24.3 33601 ChimerSeq STARFusion TCGA_RNA-Seq CD74-ROS1 CD74 chr5 149784243 - ROS1 chr6 117645578 - Exonic hg19 LUAD TCGA-86-8278-01A 92 283 In-Frame Inter-chr q33.1 q22.1 Oncogene KB Pub Seq+ 33602 ChimerSeq STARFusion TCGA_RNA-Seq ROS1-CD74 ROS1 chr6 117700222 - CD74 chr5 149782188 - Exonic hg19 LUAD TCGA-86-8278-01A 71 341 Out-of-frame Inter-chr q22.1 Oncogene q33.1 Seq+ 33603 ChimerSeq STARFusion TCGA_RNA-Seq ROS1-CD74 ROS1 chr6 117700222 - CD74 chr5 149782875 - Exonic hg19 LUAD TCGA-86-8278-01A 11 341 Out-of-frame Inter-chr q22.1 Oncogene q33.1 Seq+ 33604 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 LUAD TCGA-86-8278-01A 5 25 3'UTR-5'UTR Intra-chr q34 33605 ChimerSeq STARFusion TCGA_RNA-Seq CELSR1-CD52 CELSR1 chr22 46859604 - CD52 chr1 26646662 + Exonic hg19 LUAD TCGA-62-8394-01A 81 308 Out-of-frame Inter-chr q13.31 p36.11 Seq+ 33606 ChimerSeq STARFusion TCGA_RNA-Seq MKL2-LOC100507412 MKL2 chr16 14173211 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LUAD TCGA-62-8394-01A 6 20 5'UTR-5'UTR Inter-chr p13.12 33607 ChimerSeq STARFusion TCGA_RNA-Seq FAM83G-TRIM16 FAM83G chr17 18891560 - TRIM16 chr17 15546130 - Exonic hg19 LUAD TCGA-62-8394-01A 2 12 In-Frame Intra-chr p11.2 p12 Seq+ 33608 ChimerSeq STARFusion TCGA_RNA-Seq CD2AP-OPN5 CD2AP chr6 47512442 + OPN5 chr6 47779410 + Exonic hg19 LUAD TCGA-73-4677-01A 5 16 Out-of-frame Intra-chr p12.3 p12.3 Seq+ 33609 ChimerSeq STARFusion TCGA_RNA-Seq SFTPB-MGST1 SFTPB chr2 85892735 - MGST1 chr12 16516911 + Exonic hg19 LUAD TCGA-73-4677-01A 3 2 Out-of-frame Inter-chr p11.2 p12.3 33610 ChimerSeq STARFusion TCGA_RNA-Seq EXOC7-FOXJ1 EXOC7 chr17 74093877 - FOXJ1 chr17 74134201 - Exonic hg19 LUAD TCGA-86-8673-01A 7 62 Out-of-frame Intra-chr q25.1 q25.1 Transcription factor Seq+ 33611 ChimerSeq STARFusion TCGA_RNA-Seq ALDH9A1-NME7 ALDH9A1 chr1 165651344 - NME7 chr1 169206925 - Exonic hg19 LUAD TCGA-86-8673-01A 8 33 In-Frame Intra-chr q24.1 q24.2 Seq+ 33612 ChimerSeq STARFusion TCGA_RNA-Seq PPFIBP1-CCDC91 PPFIBP1 chr12 27731172 + CCDC91 chr12 28603094 + Exonic hg19 LUAD TCGA-86-8673-01A 6 30 5'UTR-CDS Intra-chr p11.23 p11.22 Seq+ 33613 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R37-CACNG1 PPP1R37 chr19 45596785 + CACNG1 chr17 65040832 + Exonic hg19 LUAD TCGA-86-8673-01A 5 34 In-Frame Inter-chr q13.32 q24.2 Seq+ 33614 ChimerSeq STARFusion TCGA_RNA-Seq PRPF3-CTSS PRPF3 chr1 150294041 + CTSS chr1 150738270 - Exonic hg19 LUAD TCGA-86-8673-01A 10 10 5'UTR-5'UTR Intra-chr q21.2 q21.3 Seq+ 33615 ChimerSeq STARFusion TCGA_RNA-Seq FARP2-SEPT2 FARP2 chr2 242357524 + SEPT2 chr2 242291382 + Exonic hg19 LUAD TCGA-86-8673-01A 4 26 CDS-3'UTR Intra-chr q37.3 q37.3 Seq+ 33616 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57752204 + VMP1 chr17 57915656 + Exonic hg19 LUAD TCGA-86-8673-01A 5 20 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 33617 ChimerSeq STARFusion TCGA_RNA-Seq HINT3-NCOA7 HINT3 chr6 126298870 + NCOA7 chr6 126242089 + Exonic hg19 LUAD TCGA-86-8673-01A 3 13 3'UTR-CDS Intra-chr q22.32 q22.31 33618 ChimerSeq STARFusion TCGA_RNA-Seq PIP5K1A-C1orf56 PIP5K1A chr1 151199876 + C1orf56 chr1 151022914 + Exonic hg19 LUAD TCGA-86-8673-01A 4 9 In-Frame Intra-chr q21.3 q21.3 Seq+ 33619 ChimerSeq STARFusion TCGA_RNA-Seq ATOH8-GNLY ATOH8 chr2 85982080 + GNLY chr2 85922443 + Exonic hg19 LUAD TCGA-86-8673-01A 4 7 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 33620 ChimerSeq STARFusion TCGA_RNA-Seq SETD2-KIF9 SETD2 chr3 47205344 - KIF9 chr3 47289576 - Exonic hg19 LUAD TCGA-86-8673-01A 3 11 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Seq+ 33621 ChimerSeq STARFusion TCGA_RNA-Seq PRPF3-CTSS PRPF3 chr1 150294041 + CTSS chr1 150730456 - Exonic hg19 LUAD TCGA-86-8673-01A 3 10 5'UTR-CDS Intra-chr q21.2 q21.3 Seq+ 33622 ChimerSeq STARFusion TCGA_RNA-Seq HINT3-NCOA7 HINT3 chr6 126296119 + NCOA7 chr6 126242089 + Exonic hg19 LUAD TCGA-86-8673-01A 2 13 In-Frame Intra-chr q22.32 q22.31 33623 ChimerSeq STARFusion TCGA_RNA-Seq TFRC-LOC401109 TFRC chr3 195798267 - LOC401109 chr3 195886771 + Exonic hg19 LUAD TCGA-86-8673-01A 3 6 CDS-5'UTR Intra-chr q29 33624 ChimerSeq STARFusion TCGA_RNA-Seq SHANK2-EFCAB6 SHANK2 chr11 70505933 - EFCAB6 chr22 43936237 - Exonic hg19 LUAD TCGA-86-8673-01A 3 5 In-Frame Inter-chr q13.4 q13.31 Seq+ 33625 ChimerSeq STARFusion TCGA_RNA-Seq TFRC-LOC401109 TFRC chr3 195798874 - LOC401109 chr3 195886771 + Exonic hg19 LUAD TCGA-86-8673-01A 2 6 CDS-5'UTR Intra-chr q29 33626 ChimerSeq STARFusion TCGA_RNA-Seq PPAP2A-SLC38A9 PPAP2A chr5 54830400 - SLC38A9 chr5 54931485 - Exonic hg19 LUAD TCGA-86-8673-01A 2 2 Out-of-frame Intra-chr q11.2 Seq+ 33627 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1D-CCDC57 CSNK1D chr17 80209255 - CCDC57 chr17 80059742 - Exonic hg19 LUAD TCGA-95-7944-01A 44 98 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 33628 ChimerSeq STARFusion TCGA_RNA-Seq LOC100507412-ATP5D LOC100507412 chrUn_gl000220 100554 + ATP5D chr19 1242455 + Exonic hg19 LUAD TCGA-95-7944-01A 2 6 5'UTR-CDS Inter-chr p13.3 33629 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-NUTF2 CBFB chr16 67070658 + NUTF2 chr16 67902243 + Exonic hg19 LUAD TCGA-78-8660-01A 47 152 In-Frame Intra-chr q22.1 q22.1 Seq+ 33630 ChimerSeq STARFusion TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5434071 - RNF216 chr7 5663756 - Exonic hg19 LUAD TCGA-78-8660-01A 13 43 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 33631 ChimerSeq STARFusion TCGA_RNA-Seq HIF1A-LRRC9 HIF1A chr14 62162557 + LRRC9 chr14 60411307 + Exonic hg19 LUAD TCGA-78-8660-01A 9 54 Out-of-frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 Seq+ 33632 ChimerSeq STARFusion TCGA_RNA-Seq GTF2A1-KIAA0391 GTF2A1 chr14 81682757 - KIAA0391 chr14 35649876 + Exonic hg19 LUAD TCGA-78-8660-01A 15 26 In-Frame Intra-chr q31.1 q13.2 Seq+ 33633 ChimerSeq STARFusion TCGA_RNA-Seq NPLOC4-P4HB NPLOC4 chr17 79589192 - P4HB chr17 79805223 - Exonic hg19 LUAD TCGA-78-8660-01A 9 36 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 33634 ChimerSeq STARFusion TCGA_RNA-Seq SAFB2-LONP1 SAFB2 chr19 5598804 - LONP1 chr19 5708414 - Exonic hg19 LUAD TCGA-78-8660-01A 10 24 In-Frame Intra-chr p13.3 Tumor suppressor gene Transcription factor p13.3 Seq+ 33635 ChimerSeq STARFusion TCGA_RNA-Seq INPP5B-SF3A3 INPP5B chr1 38338602 - SF3A3 chr1 38435407 - Exonic hg19 LUAD TCGA-78-8660-01A 8 30 In-Frame Intra-chr p34.3 p34.3 Seq+ 33636 ChimerSeq STARFusion TCGA_RNA-Seq STRN3-EGLN3 STRN3 chr14 31495110 - EGLN3 chr14 34400421 - Exonic hg19 LUAD TCGA-78-8660-01A 5 34 In-Frame Intra-chr q12 q13.1 Tumor suppressor gene Seq+ 33637 ChimerSeq STARFusion TCGA_RNA-Seq FBXO34-HECTD1 FBXO34 chr14 55738255 + HECTD1 chr14 31638674 - Exonic hg19 LUAD TCGA-78-8660-01A 2 36 5'UTR-CDS Intra-chr q22.3 q12 Seq+ 33638 ChimerSeq STARFusion TCGA_RNA-Seq HMOX2-CDIP1 HMOX2 chr16 4526488 + CDIP1 chr16 4564665 - Exonic hg19 LUAD TCGA-78-8660-01A 5 17 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 33639 ChimerSeq STARFusion TCGA_RNA-Seq RALY-DEFB123 RALY chr20 32581937 + DEFB123 chr20 30037832 + Exonic hg19 LUAD TCGA-78-8660-01A 3 19 5'UTR-CDS Intra-chr q11.22 q11.21 Seq+ 33640 ChimerSeq STARFusion TCGA_RNA-Seq ERC1-WNK1 ERC1 chr12 1137738 + WNK1 chr12 987378 + Exonic hg19 LUAD TCGA-78-8660-01A 2 9 In-Frame Intra-chr p13.33 Seq+ 33641 ChimerSeq STARFusion TCGA_RNA-Seq MYO9A-SLCO3A1 MYO9A chr15 72410021 - SLCO3A1 chr15 92638111 + Exonic hg19 LUAD TCGA-78-8660-01A 4 0 5'UTR-CDS Intra-chr q23 q26.1 33642 ChimerSeq STARFusion TCGA_RNA-Seq SLC34A2-ROS1 SLC34A2 chr4 25678324 + ROS1 chr6 117645578 - Exonic hg19 LUAD TCGA-05-4426-01A 148 1075 Out-of-frame Inter-chr p15.2 q22.1 Oncogene KB Pub Seq+ 33643 ChimerSeq STARFusion TCGA_RNA-Seq SLC34A2-ROS1 SLC34A2 chr4 25678324 + ROS1 chr6 117650609 - Exonic hg19 LUAD TCGA-05-4426-01A 79 1075 Out-of-frame Inter-chr p15.2 q22.1 Oncogene KB Pub Seq+ 33644 ChimerSeq STARFusion TCGA_RNA-Seq TICAM1-IL12RB1 TICAM1 chr19 4831626 - IL12RB1 chr19 18180523 - Exonic hg19 LUAD TCGA-05-4426-01A 21 132 5'UTR-CDS Intra-chr p13.3 p13.11 Seq+ 33645 ChimerSeq STARFusion TCGA_RNA-Seq THRAP3-AGO3 THRAP3 chr1 36725085 + AGO3 chr1 36499775 + Exonic hg19 LUAD TCGA-05-4426-01A 8 41 Out-of-frame Intra-chr p34.3 p34.3 33646 ChimerSeq STARFusion TCGA_RNA-Seq KANK1-DOCK8 KANK1 chr9 504754 + DOCK8 chr9 463517 + Exonic hg19 LUAD TCGA-05-4426-01A 9 24 5'UTR-CDS Intra-chr p24.3 Tumor suppressor gene p24.3 Seq+ 33647 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-MYO10 NIPBL chr5 37010327 + MYO10 chr5 16877816 - Exonic hg19 LUAD TCGA-05-4426-01A 8 28 In-Frame Intra-chr p13.2 p15.1 Seq+ 33648 ChimerSeq STARFusion TCGA_RNA-Seq CDC37-ELL CDC37 chr19 10514054 - ELL chr19 18583692 - Exonic hg19 LUAD TCGA-05-4426-01A 5 15 In-Frame Intra-chr p13.2 p13.11 Seq+ 33649 ChimerSeq STARFusion TCGA_RNA-Seq ANKH-MXD3 ANKH chr5 14741936 - MXD3 chr5 176737541 - Exonic hg19 LUAD TCGA-05-4426-01A 4 17 Out-of-frame Intra-chr p15.2 q35.3 Transcription factor Seq+ 33650 ChimerSeq STARFusion TCGA_RNA-Seq KANK1-DOCK8 KANK1 chr9 540667 + DOCK8 chr9 463517 + Exonic hg19 LUAD TCGA-05-4426-01A 2 24 5'UTR-CDS Intra-chr p24.3 Tumor suppressor gene p24.3 Seq+ 33651 ChimerSeq STARFusion TCGA_RNA-Seq DNMT1-AP1M1 DNMT1 chr19 10254442 - AP1M1 chr19 16344304 + Exonic hg19 LUAD TCGA-05-4426-01A 3 5 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene Transcription factor p13.11 Seq+ 33652 ChimerSeq STARFusion TCGA_RNA-Seq POLDIP2-OSMR POLDIP2 chr17 26674382 - OSMR chr5 38931985 + Exonic hg19 LUAD TCGA-05-4426-01A 3 4 3'UTR-CDS Inter-chr q11.2 p13.1 33653 ChimerSeq STARFusion TCGA_RNA-Seq SUGT1-NOL6 SUGT1 chr13 53237247 + NOL6 chr9 33472410 - Exonic hg19 LUAD TCGA-05-4426-01A 2 1 In-Frame Inter-chr q14.3 p13.3 33654 ChimerSeq STARFusion TCGA_RNA-Seq CPD-ORMDL3 CPD chr17 28712254 + ORMDL3 chr17 38080473 - Exonic hg19 LUAD TCGA-69-7761-01A 7 47 CDS-5'UTR Intra-chr q11.2 Tumor suppressor gene q21.1 Seq+ 33655 ChimerSeq STARFusion TCGA_RNA-Seq CPD-ORMDL3 CPD chr17 28712254 + ORMDL3 chr17 38080478 - Exonic hg19 LUAD TCGA-69-7761-01A 5 47 CDS-5'UTR Intra-chr q11.2 Tumor suppressor gene q21.1 Seq+ 33656 ChimerSeq STARFusion TCGA_RNA-Seq XPNPEP3-C22orf28 XPNPEP3 chr22 41282519 + C22orf28 chr22 32784086 - Exonic hg19 LUAD TCGA-69-7761-01A 3 34 In-Frame Intra-chr q13.2 Seq+ 33657 ChimerSeq STARFusion TCGA_RNA-Seq PHF20-ZFAS1 PHF20 chr20 34389527 + ZFAS1 chr20 47905582 + Exonic hg19 LUAD TCGA-55-8206-01A 18 372 Out-of-frame Intra-chr q11.22 Transcription factor q13.13 Tumor suppressor gene Seq+ 33658 ChimerSeq STARFusion TCGA_RNA-Seq PHF20-ZFAS1 PHF20 chr20 34400641 + ZFAS1 chr20 47897440 + Exonic hg19 LUAD TCGA-55-8206-01A 14 372 Out-of-frame Intra-chr q11.22 Transcription factor q13.13 Tumor suppressor gene Seq+ 33659 ChimerSeq STARFusion TCGA_RNA-Seq PHF20-ZFAS1 PHF20 chr20 34389527 + ZFAS1 chr20 47897440 + Exonic hg19 LUAD TCGA-55-8206-01A 2 372 Out-of-frame Intra-chr q11.22 Transcription factor q13.13 Tumor suppressor gene Seq+ 33660 ChimerSeq STARFusion TCGA_RNA-Seq DZANK1-DTD1 DZANK1 chr20 18429628 - DTD1 chr20 18744004 + Exonic hg19 LUAD TCGA-55-8206-01A 27 179 CDS-3'UTR Intra-chr p11.23 p11.23 Seq+ 33661 ChimerSeq STARFusion TCGA_RNA-Seq DSTN-DZANK1 DSTN chr20 17550856 + DZANK1 chr20 18436005 - Exonic hg19 LUAD TCGA-55-8206-01A 11 83 Out-of-frame Intra-chr p12.1 p11.23 Seq+ 33662 ChimerSeq STARFusion TCGA_RNA-Seq DSTN-DZANK1 DSTN chr20 17550856 + DZANK1 chr20 18434471 - Exonic hg19 LUAD TCGA-55-8206-01A 2 83 In-Frame Intra-chr p12.1 p11.23 Seq+ 33663 ChimerSeq STARFusion TCGA_RNA-Seq CPNE1-GNAS CPNE1 chr20 34252682 - GNAS chr20 57478586 + Exonic hg19 LUAD TCGA-55-8206-01A 10 33 5'UTR-5'UTR Intra-chr q11.22 q13.32 Oncogene Seq+ 33664 ChimerSeq STARFusion TCGA_RNA-Seq RBM12-GNAS RBM12 chr20 34252682 - GNAS chr20 57478586 + Exonic hg19 LUAD TCGA-55-8206-01A 10 33 5'UTR-5'UTR Intra-chr q11.22 q13.32 Oncogene Seq+ 33665 ChimerSeq STARFusion TCGA_RNA-Seq BCAS4-PHF20 BCAS4 chr20 49458437 + PHF20 chr20 34501171 + Exonic hg19 LUAD TCGA-55-8206-01A 7 37 Out-of-frame Intra-chr q13.13 q11.22 Transcription factor Seq+ 33666 ChimerSeq STARFusion TCGA_RNA-Seq CDK5RAP1-GNAS CDK5RAP1 chr20 31979949 - GNAS chr20 57478582 + Exonic hg19 LUAD TCGA-55-8206-01A 4 32 Out-of-frame Intra-chr q11.21 q13.32 Oncogene Seq+ 33667 ChimerSeq STARFusion TCGA_RNA-Seq CDK5RAP1-GNAS CDK5RAP1 chr20 31979948 - GNAS chr20 57478586 + Exonic hg19 LUAD TCGA-55-8206-01A 3 32 Out-of-frame Intra-chr q11.21 q13.32 Oncogene Seq+ 33668 ChimerSeq STARFusion TCGA_RNA-Seq EXD2-GMEB2 EXD2 chr14 69676520 + GMEB2 chr20 62250807 - Exonic hg19 LUAD TCGA-55-8206-01A 2 2 5'UTR-5'UTR Inter-chr q24.1 q13.33 Transcription factor Seq+ 33669 ChimerSeq STARFusion TCGA_RNA-Seq COPE-TMEM59L COPE chr19 19030032 - TMEM59L chr19 18724682 + Exonic hg19 LUAD TCGA-55-6981-01A 5 39 In-Frame Intra-chr p13.11 p13.11 Seq+ 33670 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-NKAIN1 PUM1 chr1 31532051 - NKAIN1 chr1 31661034 - Exonic hg19 LUAD TCGA-38-4631-01A 9 79 In-Frame Intra-chr p35.2 p35.2 Seq+ 33671 ChimerSeq STARFusion TCGA_RNA-Seq TFEB-CAPZA2 TFEB chr6 41703088 - CAPZA2 chr7 116528181 + Exonic hg19 LUAD TCGA-38-4631-01A 5 15 5'UTR-CDS Inter-chr p21.1 Transcription factor q31.2 Seq+ 33672 ChimerSeq STARFusion TCGA_RNA-Seq TXNDC11-LOC100506810 TXNDC11 chr16 11815433 - LOC100506810 chr1 234864095 + Exonic hg19 LUAD TCGA-05-4424-01A 4 20 CDS-5'UTR Inter-chr p13.13 33673 ChimerSeq STARFusion TCGA_RNA-Seq UBXN7-TCTEX1D2 UBXN7 chr3 196159198 - TCTEX1D2 chr3 196033883 - Exonic hg19 LUAD TCGA-05-4424-01A 3 9 In-Frame Intra-chr q29 q29 33674 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-HHAT NFAT5 chr16 69600277 + HHAT chr1 210560812 + Exonic hg19 LUAD TCGA-91-8497-01A 3 26 Out-of-frame Inter-chr q22.1 Transcription factor Seq+ 33675 ChimerSeq STARFusion TCGA_RNA-Seq HIF1A-PRKCH HIF1A chr14 62207906 + PRKCH chr14 61995793 + Exonic hg19 LUAD TCGA-44-2668-01B 7 35 In-Frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 Seq+ 33676 ChimerSeq STARFusion TCGA_RNA-Seq FEZF2-RNA45S5 FEZF2 chr3 62358192 - RNA45S5 chrUn_gl000220 114237 + Exonic hg19 LUAD TCGA-44-2668-01B 4 6 Out-of-frame Inter-chr p14.2 Transcription factor 33677 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-CFL1 RNA45S5 chrUn_gl000220 117553 + CFL1 chr11 65622491 - Exonic hg19 LUAD TCGA-44-2668-01B 3 1 Out-of-frame Inter-chr q13.1 33678 ChimerSeq STARFusion TCGA_RNA-Seq EBF4-IGH@ EBF4 chr20 2673804 + IGH@ chr14 106330468 - Exonic hg19 LUAD TCGA-L9-A8F4 174 1 Out-of-frame Inter-chr p13 Transcription factor 32.33 33679 ChimerSeq STARFusion TCGA_RNA-Seq EBF4-IGH@ EBF4 chr20 2673805 + IGH@ chr14 106330066 - Exonic hg19 LUAD TCGA-L9-A8F4 102 1 Out-of-frame Inter-chr p13 Transcription factor 32.33 33680 ChimerSeq STARFusion TCGA_RNA-Seq KRT7-IGH@ KRT7 chr12 52626967 + IGH@ chr14 106330072 - Exonic hg19 LUAD TCGA-L9-A8F4 35 4 Out-of-frame Inter-chr q13.13 32.33 33681 ChimerSeq STARFusion TCGA_RNA-Seq LMNB2-IGHG1 LMNB2 chr19 2434062 - IGHG1 chr14 106209412 - Exonic hg19 LUAD TCGA-L9-A8F4 27 1 Out-of-frame Inter-chr p13.3 q32.33 33682 ChimerSeq STARFusion TCGA_RNA-Seq SLC6A6-RPL32 SLC6A6 chr3 14499590 + RPL32 chr3 12883123 - Exonic hg19 LUAD TCGA-L9-A8F4 8 61 CDS-5'UTR Intra-chr p25.1 p25.2 33683 ChimerSeq STARFusion TCGA_RNA-Seq GRAMD1A-KRTDAP GRAMD1A chr19 35500233 + KRTDAP chr19 35978661 - Exonic hg19 LUAD TCGA-L9-A8F4 3 9 In-Frame Intra-chr q13.11 q13.12 Seq+ 33684 ChimerSeq STARFusion TCGA_RNA-Seq ERLEC1-ACYP2 ERLEC1 chr2 54040210 + ACYP2 chr2 54278095 + Exonic hg19 LUAD TCGA-L9-A8F4 3 8 CDS-5'UTR Intra-chr p16.2 p16.2 Seq+ 33685 ChimerSeq STARFusion TCGA_RNA-Seq F11R-NOS1AP F11R chr1 160990800 - NOS1AP chr1 162324977 + Exonic hg19 LUAD TCGA-78-7146-01A 29 220 In-Frame Intra-chr q23.3 q23.3 Seq+ 33686 ChimerSeq STARFusion TCGA_RNA-Seq MED13-DDX42 MED13 chr17 60129898 - DDX42 chr17 61886180 + Exonic hg19 LUAD TCGA-78-7146-01A 36 150 Out-of-frame Intra-chr q23.2 q23.3 Seq+ 33687 ChimerSeq STARFusion TCGA_RNA-Seq HELZ-CACNG4 HELZ chr17 65116521 - CACNG4 chr17 65026582 + Exonic hg19 LUAD TCGA-78-7146-01A 16 90 In-Frame Intra-chr q24.2 q24.2 Seq+ 33688 ChimerSeq STARFusion TCGA_RNA-Seq CDC42EP4-LOC100507412 CDC42EP4 chr17 71308032 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LUAD TCGA-78-7146-01A 6 61 5'UTR-5'UTR Inter-chr q25.1 33689 ChimerSeq STARFusion TCGA_RNA-Seq VANGL2-PDE4DIP VANGL2 chr1 160370659 + PDE4DIP chr1 145021167 - Exonic hg19 LUAD TCGA-78-7146-01A 4 68 5'UTR-CDS Intra-chr q23.2 q21.2 Oncogene Seq+ 33690 ChimerSeq STARFusion TCGA_RNA-Seq FBF1-HELZ FBF1 chr17 73933647 - HELZ chr17 65134230 - Exonic hg19 LUAD TCGA-78-7146-01A 5 28 Out-of-frame Intra-chr q25.1 q24.2 Seq+ 33691 ChimerSeq STARFusion TCGA_RNA-Seq ARNT-F5 ARNT chr1 150825238 - F5 chr1 169494146 - Exonic hg19 LUAD TCGA-78-7146-01A 4 12 Out-of-frame Intra-chr q21.3 Oncogene Transcription factor q24.2 Seq+ 33692 ChimerSeq STARFusion TCGA_RNA-Seq MFSD11-LOC100507412 MFSD11 chr17 74771253 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LUAD TCGA-78-7146-01A 3 13 CDS-5'UTR Inter-chr q25.1 33693 ChimerSeq STARFusion TCGA_RNA-Seq ATF6-GJA5 ATF6 chr1 161751789 + GJA5 chr1 147231379 - Exonic hg19 LUAD TCGA-78-7146-01A 2 15 CDS-5'UTR Intra-chr q23.3 Transcription factor q21.2 Seq+ 33694 ChimerSeq STARFusion TCGA_RNA-Seq SCN4A-TRIM47 SCN4A chr17 62034522 - TRIM47 chr17 73872573 - Exonic hg19 LUAD TCGA-78-7146-01A 2 14 In-Frame Intra-chr q23.3 q25.1 Seq+ 33695 ChimerSeq STARFusion TCGA_RNA-Seq TRIM41-ASB9 TRIM41 chr5 180651812 + ASB9 chrX 15277067 - Exonic hg19 LUAD TCGA-78-7146-01A 3 4 Out-of-frame Inter-chr q35.3 p22.2 Seq+ 33696 ChimerSeq STARFusion TCGA_RNA-Seq NOS1AP-F5 NOS1AP chr1 162313766 + F5 chr1 169484864 - Exonic hg19 LUAD TCGA-78-7146-01A 2 4 Out-of-frame Intra-chr q23.3 q24.2 Seq+ 33697 ChimerSeq STARFusion TCGA_RNA-Seq TCF25-SPIRE2 TCF25 chr16 89965280 + SPIRE2 chr16 89935975 + Exonic hg19 LUAD TCGA-55-8508-01A 6 17 In-Frame Intra-chr q24.3 q24.3 Seq+ 33698 ChimerSeq STARFusion TCGA_RNA-Seq MTUS1-FGL1 MTUS1 chr8 17570723 - FGL1 chr8 17743080 - Exonic hg19 LUAD TCGA-55-8508-01A 3 22 CDS-5'UTR Intra-chr p22 Tumor suppressor gene p22 Seq+ 33699 ChimerSeq STARFusion TCGA_RNA-Seq C5orf63-MARCH3 C5orf63 chr5 126407276 - 2019_ 3_ 3_ chr5 126253919 - Exonic hg19 LUAD TCGA-97-7941-01A 2 1 Out-of-frame Intra-chr q23.2 q23.2 33700 ChimerSeq STARFusion TCGA_RNA-Seq LPCAT1-SDHAP3 LPCAT1 chr5 1488506 - SDHAP3 chr5 1576424 - Exonic hg19 LUAD TCGA-55-8506-01A 62 232 CDS-3'UTR Intra-chr p15.33 33701 ChimerSeq STARFusion TCGA_RNA-Seq PCNX-RAD51B PCNX chr14 71374720 + RAD51B chr14 68758601 + Exonic hg19 LUAD TCGA-55-8506-01A 16 308 In-Frame Intra-chr q24.1 Seq+ 33702 ChimerSeq STARFusion TCGA_RNA-Seq NFIX-GCDH NFIX chr19 13136366 + GCDH chr19 13002930 + Exonic hg19 LUAD TCGA-55-8506-01A 12 38 In-Frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 33703 ChimerSeq STARFusion TCGA_RNA-Seq NXN-ABR NXN chr17 882559 - ABR chr17 962107 - Exonic hg19 LUAD TCGA-55-8506-01A 10 25 In-Frame Intra-chr p13.3 p13.3 Seq+ 33704 ChimerSeq STARFusion TCGA_RNA-Seq NUP107-SHD NUP107 chr12 69109520 + SHD chr19 4290444 + Exonic hg19 LUAD TCGA-55-8506-01A 6 32 Out-of-frame Inter-chr q15 p13.3 Seq+ 33705 ChimerSeq STARFusion TCGA_RNA-Seq MAMSTR-SULT2B1 MAMSTR chr19 49216973 - SULT2B1 chr19 49102392 + Exonic hg19 LUAD TCGA-55-8506-01A 2 46 In-Frame Intra-chr q13.33 q13.33 Seq+ 33706 ChimerSeq STARFusion TCGA_RNA-Seq SGSM3-TNRC6B SGSM3 chr22 40804846 + TNRC6B chr22 40696459 + Exonic hg19 LUAD TCGA-55-8506-01A 7 25 In-Frame Intra-chr q13.1 q13.1 Seq+ 33707 ChimerSeq STARFusion TCGA_RNA-Seq NFIX-GCDH NFIX chr19 13136366 + GCDH chr19 13004297 + Exonic hg19 LUAD TCGA-55-8506-01A 3 38 In-Frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 33708 ChimerSeq STARFusion TCGA_RNA-Seq LITAF-BCAR4 LITAF chr16 11680742 - BCAR4 chr16 11914154 - Exonic hg19 LUAD TCGA-55-8506-01A 7 5 5'UTR-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 33709 ChimerSeq STARFusion TCGA_RNA-Seq WDR34-ZER1 WDR34 chr9 131418820 - ZER1 chr9 131495807 - Exonic hg19 LUAD TCGA-55-8506-01A 2 25 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 33710 ChimerSeq STARFusion TCGA_RNA-Seq CTNND1-ZDHHC5 CTNND1 chr11 57576938 + ZDHHC5 chr11 57463392 + Exonic hg19 LUAD TCGA-55-8506-01A 2 7 Out-of-frame Intra-chr q12.1 Tumor suppressor gene q12.1 Seq+ 33711 ChimerSeq STARFusion TCGA_RNA-Seq BPTF-PITPNC1 BPTF chr17 65871136 + PITPNC1 chr17 65574302 + Exonic hg19 LUAD TCGA-55-8506-01A 2 6 Out-of-frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 33712 ChimerSeq STARFusion TCGA_RNA-Seq LITAF-BCAR4 LITAF chr16 11680742 - BCAR4 chr16 11915612 - Exonic hg19 LUAD TCGA-55-8506-01A 2 5 5'UTR-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 33713 ChimerSeq STARFusion TCGA_RNA-Seq SFTPA2-SFPQ SFTPA2 chr10 81315764 - SFPQ chr1 35654690 - Exonic hg19 LUAD TCGA-55-8506-01A 3 1 Out-of-frame Inter-chr q22.3 p34.3 33714 ChimerSeq STARFusion TCGA_RNA-Seq MKNK1-ATPAF1 MKNK1 chr1 47069899 - ATPAF1 chr1 47118300 - Exonic hg19 LUAD TCGA-55-8506-01A 2 3 5'UTR-CDS Intra-chr p33 p33 Seq+ 33715 ChimerSeq STARFusion TCGA_RNA-Seq MKNK1-ATPAF1 MKNK1 chr1 47069857 - ATPAF1 chr1 47118300 - Exonic hg19 LUAD TCGA-55-8506-01A 2 3 5'UTR-CDS Intra-chr p33 p33 Seq+ 33716 ChimerSeq STARFusion TCGA_RNA-Seq SMARCA2-DCTD SMARCA2 chr9 2015404 + DCTD chr4 183836728 - Exonic hg19 LUAD TCGA-55-8506-01A 2 1 5'UTR-5'UTR Inter-chr p24.3 Tumor suppressor gene q35.1 33717 ChimerSeq STARFusion TCGA_RNA-Seq ABCC6-LTA4H ABCC6 chr16 16276269 - LTA4H chr12 96397698 - Exonic hg19 LUAD TCGA-44-7672-01A 2 7 3'UTR-CDS Inter-chr q23.1 Seq+ 33718 ChimerSeq STARFusion TCGA_RNA-Seq COX6B1-TTYH1 COX6B1 chr19 36142251 + TTYH1 chr19 54937850 + Exonic hg19 LUAD TCGA-49-4488-01A 3 27 Out-of-frame Intra-chr q13.12 Seq+ 33719 ChimerSeq STARFusion TCGA_RNA-Seq MLL4-CEACAM16 MLL4 chr19 36228164 + CEACAM16 chr19 45213768 + Exonic hg19 LUAD TCGA-49-4488-01A 5 10 Out-of-frame Intra-chr q13.31 33720 ChimerSeq STARFusion TCGA_RNA-Seq LINC00482-ACTG1 LINC00482 chr17 79282985 - ACTG1 chr17 79479386 - Exonic hg19 LUAD TCGA-49-4488-01A 3 6 3'UTR-3'UTR Intra-chr q25.3 q25.3 33721 ChimerSeq STARFusion TCGA_RNA-Seq AMBRA1-ARHGAP1 AMBRA1 chr11 46563495 - ARHGAP1 chr11 46717706 - Exonic hg19 LUAD TCGA-49-4488-01A 2 7 CDS-5'UTR Intra-chr p11.2 p11.2 Seq+ 33722 ChimerSeq STARFusion TCGA_RNA-Seq MCM5-MTMR3 MCM5 chr22 35804556 + MTMR3 chr22 30366965 + Exonic hg19 LUAD TCGA-49-4488-01A 2 1 CDS-5'UTR Intra-chr q12.3 q12.2 33723 ChimerSeq STARFusion TCGA_RNA-Seq FYN-LAMA4 FYN chr6 112015578 - LAMA4 chr6 112575493 - Exonic hg19 LUAD TCGA-MP-A4SY-01A 3 4 CDS-5'UTR Intra-chr q21 TK:Src q21 Seq+ 33724 ChimerSeq STARFusion TCGA_RNA-Seq EXOC4-SUPT3H EXOC4 chr7 133164892 + SUPT3H chr6 44797594 - Exonic hg19 LUAD TCGA-86-8585-01A 6 35 Out-of-frame Inter-chr q33 p21.1 Seq+ 33725 ChimerSeq STARFusion TCGA_RNA-Seq POLR2J3-UPK3BL POLR2J3 chr7 102178767 - UPK3BL chr7 102278022 - Exonic hg19 LUAD TCGA-86-8585-01A 3 18 Out-of-frame Intra-chr q22.1 33726 ChimerSeq STARFusion TCGA_RNA-Seq MLL3-TPTE MLL3 chr7 151902191 - TPTE chr21 10987877 - Exonic hg19 LUAD TCGA-86-8585-01A 2 1 CDS-5'UTR Inter-chr Tumor suppressor gene p11.2 Seq+ 33727 ChimerSeq STARFusion TCGA_RNA-Seq EFR3A-ZFAT EFR3A chr8 132999949 + ZFAT chr8 135577664 - Exonic hg19 LUAD TCGA-78-8640-01A 13 75 In-Frame Intra-chr q24.22 q24.22 Transcription factor Seq+ 33728 ChimerSeq STARFusion TCGA_RNA-Seq CTNND1-ZDHHC5 CTNND1 chr11 57529518 + ZDHHC5 chr11 57466031 + Exonic hg19 LUAD TCGA-78-8640-01A 6 58 5'UTR-CDS Intra-chr q12.1 Tumor suppressor gene q12.1 Seq+ 33729 ChimerSeq STARFusion TCGA_RNA-Seq EFR3A-PHF20L1 EFR3A chr8 132916569 + PHF20L1 chr8 133823291 + Exonic hg19 LUAD TCGA-78-8640-01A 7 13 In-Frame Intra-chr q24.22 q24.22 Seq+ 33730 ChimerSeq STARFusion TCGA_RNA-Seq CANX-SQSTM1 CANX chr5 179134191 + SQSTM1 chr5 179260032 + Exonic hg19 LUAD TCGA-78-8640-01A 2 3 In-Frame Intra-chr q35.3 33731 ChimerSeq STARFusion TCGA_RNA-Seq RASAL2-GALNTL6 RASAL2 chr1 178269253 + GALNTL6 chr4 173730512 + Exonic hg19 LUAD TCGA-78-8640-01A 2 3 In-Frame Inter-chr q25.2 Tumor suppressor gene q34.1 Seq+ 33732 ChimerSeq STARFusion TCGA_RNA-Seq ERBB3-BCAR4 ERBB3 chr12 56493813 + BCAR4 chr16 11914154 - Exonic hg19 LUAD TCGA-05-5429-01A 29 216 CDS-3'UTR Inter-chr q13.2 Oncogene p13.13 Seq+ 33733 ChimerSeq STARFusion TCGA_RNA-Seq ERBB3-BCAR4 ERBB3 chr12 56493813 + BCAR4 chr16 11915612 - Exonic hg19 LUAD TCGA-05-5429-01A 10 216 CDS-3'UTR Inter-chr q13.2 Oncogene p13.13 Seq+ 33734 ChimerSeq STARFusion TCGA_RNA-Seq ERBB3-BCAR4 ERBB3 chr12 56493529 + BCAR4 chr16 11915612 - Exonic hg19 LUAD TCGA-05-5429-01A 4 216 CDS-3'UTR Inter-chr q13.2 Oncogene p13.13 Seq+ 33735 ChimerSeq STARFusion TCGA_RNA-Seq PRKCA-PITPNC1 PRKCA chr17 64492401 + PITPNC1 chr17 65528918 + Exonic hg19 LUAD TCGA-05-5429-01A 3 6 In-Frame Intra-chr q24.2 q24.2 Seq+ 33736 ChimerSeq STARFusion TCGA_RNA-Seq ERO1L-FERMT2 ERO1L chr14 53145152 - FERMT2 chr14 53331229 - Exonic hg19 LUAD TCGA-MP-A4T4-01A 4 0 In-Frame Intra-chr q22.1 33737 ChimerSeq STARFusion TCGA_RNA-Seq TRIP12-DNER TRIP12 chr2 230642031 - DNER chr2 230456604 - Exonic hg19 LUAD TCGA-50-5930-01A 11 14 In-Frame Intra-chr q36.3 q36.3 Seq+ 33738 ChimerSeq STARFusion TCGA_RNA-Seq PPWD1-NLN PPWD1 chr5 64875440 + NLN chr5 65076006 + Exonic hg19 LUAD TCGA-50-5930-01A 3 3 In-Frame Intra-chr q12.3 q12.3 Seq+ 33739 ChimerSeq STARFusion TCGA_RNA-Seq ZNF264-PIGG ZNF264 chr19 57705369 + PIGG chr4 514845 + Exonic hg19 LUAD TCGA-50-5930-01A 2 5 In-Frame Inter-chr q13.43 Transcription factor p16.3 Seq+ 33740 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-GGNBP2 PTPN12 chr7 77268641 + GGNBP2 chr17 34923502 + Exonic hg19 LUAD TCGA-55-8096-01A 3 19 3'UTR-CDS Inter-chr q11.23 Tumor suppressor gene Tumor suppressor gene Seq+ 33741 ChimerSeq STARFusion TCGA_RNA-Seq JAZF1-TAX1BP1 JAZF1 chr7 27880317 - TAX1BP1 chr7 27867357 + Exonic hg19 LUAD TCGA-55-8096-01A 2 0 In-Frame Intra-chr p15.1 Transcription factor p15.2 Seq+ 33742 ChimerSeq STARFusion TCGA_RNA-Seq KRI1-CCDC151 KRI1 chr19 10670035 - CCDC151 chr19 11534698 - Exonic hg19 LUAD TCGA-MP-A5C7-01A 12 131 In-Frame Intra-chr p13.2 p13.2 Seq+ 33743 ChimerSeq STARFusion TCGA_RNA-Seq GPR116-MEP1A GPR116 chr6 46832779 - MEP1A chr6 46802315 + Exonic hg19 LUAD TCGA-91-6840-01A 59 185 In-Frame Intra-chr p12.3 Seq+ 33744 ChimerSeq STARFusion TCGA_RNA-Seq LARP4-MUCL1 LARP4 chr12 50794811 + MUCL1 chr12 55250554 + Exonic hg19 LUAD TCGA-91-6840-01A 22 303 Out-of-frame Intra-chr q13.12 q13.2 Seq+ 33745 ChimerSeq STARFusion TCGA_RNA-Seq LARP4-MUCL1 LARP4 chr12 50794811 + MUCL1 chr12 55248900 + Exonic hg19 LUAD TCGA-91-6840-01A 18 303 Out-of-frame Intra-chr q13.12 q13.2 Seq+ 33746 ChimerSeq STARFusion TCGA_RNA-Seq TAF8-CRISP1 TAF8 chr6 42036345 + CRISP1 chr6 49819842 - Exonic hg19 LUAD TCGA-91-6840-01A 20 59 In-Frame Intra-chr p21.1 p12.3 Seq+ 33747 ChimerSeq STARFusion TCGA_RNA-Seq PPTC7-ARPC3 PPTC7 chr12 111020614 - ARPC3 chr12 110878193 - Exonic hg19 LUAD TCGA-91-6840-01A 2 16 In-Frame Intra-chr q24.11 q24.11 Seq+ 33748 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM6-SEPT9 CEACAM6 chr19 42266131 + SEPT9 chr17 75483506 + Exonic hg19 LUAD TCGA-78-7540-01A 2 1 In-Frame Inter-chr q13.2 33749 ChimerSeq STARFusion TCGA_RNA-Seq SFTPB-PGC SFTPB chr2 85892478 - PGC chr6 41704561 - Exonic hg19 LUAD TCGA-97-8174-01A 3 343 Out-of-frame Inter-chr p11.2 p21.1 33750 ChimerSeq STARFusion TCGA_RNA-Seq PGC-SFTPB PGC chr6 41704702 - SFTPB chr2 85893829 - Exonic hg19 LUAD TCGA-97-8174-01A 4 255 Out-of-frame Inter-chr p21.1 p11.2 Seq+ 33751 ChimerSeq STARFusion TCGA_RNA-Seq SLC22A25-PACS1 SLC22A25 chr11 62995933 - PACS1 chr11 65998019 + Exonic hg19 LUAD TCGA-97-8174-01A 35 49 Out-of-frame Intra-chr q12.3 q13.1 Seq+ 33752 ChimerSeq STARFusion TCGA_RNA-Seq ECHDC1-FYN ECHDC1 chr6 127635961 - FYN chr6 112029223 - Exonic hg19 LUAD TCGA-97-8174-01A 20 57 In-Frame Intra-chr q22.33 q21 TK:Src Seq+ 33753 ChimerSeq STARFusion TCGA_RNA-Seq MLL-FYN MLL chr11 118382740 + FYN chr6 112025305 - Exonic hg19 LUAD TCGA-97-8174-01A 10 20 Out-of-frame Inter-chr q23.3 q21 TK:Src Seq+ 33754 ChimerSeq STARFusion TCGA_RNA-Seq SESN1-ECHDC1 SESN1 chr6 109414998 - ECHDC1 chr6 127611422 - Exonic hg19 LUAD TCGA-97-8174-01A 8 10 Out-of-frame Intra-chr q21 q22.33 Seq+ 33755 ChimerSeq STARFusion TCGA_RNA-Seq AFF3-NPAS2 AFF3 chr2 100623094 - NPAS2 chr2 101604541 + Exonic hg19 LUAD TCGA-97-8174-01A 2 9 In-Frame Intra-chr q11.2 Oncogene q11.2 Tumor suppressor gene Transcription factor Seq+ 33756 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 LUAD TCGA-97-8174-01A 2 1 3'UTR-5'UTR Intra-chr q34 33757 ChimerSeq STARFusion TCGA_RNA-Seq NPAS2-CREB1 NPAS2 chr2 101436876 + CREB1 chr2 208420352 + Exonic hg19 LUAD TCGA-05-5428-01A 2 1 5'UTR-5'UTR Intra-chr q11.2 Tumor suppressor gene Transcription factor q33.3 Oncogene Transcription factor 33758 ChimerSeq STARFusion TCGA_RNA-Seq CAPN13-GALNT14 CAPN13 chr2 31009994 - GALNT14 chr2 31155060 - Exonic hg19 LUAD TCGA-49-4514-01A 4 10 Out-of-frame Intra-chr p23.1 p23.1 Seq+ 33759 ChimerSeq STARFusion TCGA_RNA-Seq RIT1-CCT3 RIT1 chr1 155880241 - CCT3 chr1 156282012 - Exonic hg19 LUAD TCGA-49-4514-01A 4 10 Out-of-frame Intra-chr q22 q22 Seq+ 33760 ChimerSeq STARFusion TCGA_RNA-Seq CASP8-NDUFB3 CASP8 chr2 202131514 + NDUFB3 chr2 201950182 + Exonic hg19 LUAD TCGA-49-4514-01A 2 1 In-Frame Intra-chr q33.1 Oncogene Tumor suppressor gene q33.1 33761 ChimerSeq STARFusion TCGA_RNA-Seq BRD1-APOL5 BRD1 chr22 50187682 - APOL5 chr22 36125401 + Exonic hg19 LUAD TCGA-MP-A4TI-01A 5 19 CDS-3'UTR Intra-chr q13.33 q12.3 Seq+ 33762 ChimerSeq STARFusion TCGA_RNA-Seq DPP3-KDM2A DPP3 chr11 66264948 + KDM2A chr11 66995508 + Exonic hg19 LUAD TCGA-86-7701-01A 2 8 In-Frame Intra-chr q13.2 q13.2 Transcription factor Seq+ 33763 ChimerSeq STARFusion TCGA_RNA-Seq CTSH-RASGRF1 CTSH chr15 79237233 - RASGRF1 chr15 79320201 - Exonic hg19 LUAD TCGA-86-8056-01A 65 1046 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 33764 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57915656 + Exonic hg19 LUAD TCGA-86-8056-01A 76 194 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 33765 ChimerSeq STARFusion TCGA_RNA-Seq VBP1-GABRA3 VBP1 chrX 154444852 + GABRA3 chrX 151393317 - Exonic hg19 LUAD TCGA-55-6712-01A 13 156 Out-of-frame Intra-chr q28 q28 Seq+ 33766 ChimerSeq STARFusion TCGA_RNA-Seq AKIRIN1-MEAF6 AKIRIN1 chr1 39463983 + MEAF6 chr1 37967597 - Exonic hg19 LUAD TCGA-55-6712-01A 12 60 In-Frame Intra-chr p34.3 p34.3 Seq+ 33767 ChimerSeq STARFusion TCGA_RNA-Seq PHIP-FTO PHIP chr6 79752560 - FTO chr16 54145674 + Exonic hg19 LUAD TCGA-55-6712-01A 4 74 Out-of-frame Inter-chr q14.1 q12.2 Seq+ 33768 ChimerSeq STARFusion TCGA_RNA-Seq MTM1-VBP1 MTM1 chrX 149787612 + VBP1 chrX 154448460 + Exonic hg19 LUAD TCGA-55-6712-01A 4 44 In-Frame Intra-chr q28 q28 Seq+ 33769 ChimerSeq STARFusion TCGA_RNA-Seq HECTD4-NAA25 HECTD4 chr12 112703682 - NAA25 chr12 112481672 - Exonic hg19 LUAD TCGA-55-6712-01A 4 33 Out-of-frame Intra-chr q24.13 q24.13 33770 ChimerSeq STARFusion TCGA_RNA-Seq TBL1X-SHROOM2 TBL1X chrX 9469889 + SHROOM2 chrX 9841692 + Exonic hg19 LUAD TCGA-55-6712-01A 3 5 5'UTR-CDS Intra-chr p22.31 p22.2 Seq+ 33771 ChimerSeq STARFusion TCGA_RNA-Seq CTSD-MYH9 CTSD chr11 1775118 - MYH9 chr22 36693031 - Exonic hg19 LUAD TCGA-55-6712-01A 3 3 Out-of-frame Inter-chr p15.5 q12.3 Oncogene Tumor suppressor gene 33772 ChimerSeq STARFusion TCGA_RNA-Seq ABCB8-NOS3 ABCB8 chr7 150725697 + NOS3 chr7 150706018 + Exonic hg19 LUAD TCGA-MP-A4TA-01A 13 111 Out-of-frame Intra-chr q36.1 q36.1 Seq+ 33773 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-LYRM4 ZFAND3 chr6 37897775 + LYRM4 chr6 5109725 - Exonic hg19 LUAD TCGA-44-2656-01B 4 5 Out-of-frame Intra-chr p21.2 p25.1 Seq+ 33774 ChimerSeq STARFusion TCGA_RNA-Seq LINC00348-SEPT3 LINC00348 chr13 71589380 + SEPT3 chr22 42377649 + Exonic hg19 LUAD TCGA-86-7955-01A 8 21 Out-of-frame Inter-chr q21.33 q13.2 33775 ChimerSeq STARFusion TCGA_RNA-Seq UNK-NAF1 UNK chr17 73781065 + NAF1 chr4 164085543 - Exonic hg19 LUAD TCGA-86-7955-01A 3 23 In-Frame Inter-chr q25.1 q32.2 Seq+ 33776 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD10-MYO16 ANKRD10 chr13 111545375 - MYO16 chr13 109772718 + Exonic hg19 LUAD TCGA-86-7955-01A 6 8 Out-of-frame Intra-chr q34 Seq+ 33777 ChimerSeq STARFusion TCGA_RNA-Seq ITCH-TSHZ2 ITCH chr20 33012331 + TSHZ2 chr20 52103683 + Exonic hg19 LUAD TCGA-86-7955-01A 3 15 CDS-3'UTR Intra-chr q11.22 q13.2 Transcription factor Seq+ 33778 ChimerSeq STARFusion TCGA_RNA-Seq SGSH-TBC1D16 SGSH chr17 78190831 - TBC1D16 chr17 77987408 - Exonic hg19 LUAD TCGA-86-7955-01A 3 15 CDS-5'UTR Intra-chr q25.3 q25.3 Seq+ 33779 ChimerSeq STARFusion TCGA_RNA-Seq UGDH-TLR6 UGDH chr4 39528903 - TLR6 chr4 38831158 - Exonic hg19 LUAD TCGA-86-7955-01A 2 9 5'UTR-5'UTR Intra-chr p14 p14 Seq+ 33780 ChimerSeq STARFusion TCGA_RNA-Seq MICALL2-SDK1 MICALL2 chr7 1498820 - SDK1 chr7 3658712 + Exonic hg19 LUAD TCGA-86-7955-01A 2 5 Out-of-frame Intra-chr p22.3 p22.2 Seq+ 33781 ChimerSeq STARFusion TCGA_RNA-Seq PA2G4-ANKRD52 PA2G4 chr12 56498609 + ANKRD52 chr12 56651695 - Exonic hg19 LUAD TCGA-86-7955-01A 2 1 Out-of-frame Intra-chr q13.2 Transcription factor q13.3 33782 ChimerSeq STARFusion TCGA_RNA-Seq TMED3-KIAA1024 TMED3 chr15 79606347 + KIAA1024 chr15 79748440 + Exonic hg19 LUAD TCGA-86-7955-01A 2 1 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 33783 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS16-TERT ADAMTS16 chr5 5191903 + TERT chr5 1282739 - Exonic hg19 LUAD TCGA-44-2662-01B 2 1 Out-of-frame Intra-chr p15.32 p15.33 Oncogene Seq+ 33784 ChimerSeq STARFusion TCGA_RNA-Seq ZNF512-BRE ZNF512 chr2 27806009 + BRE chr2 28561317 + Exonic hg19 LUAD TCGA-44-3398-01A 2 1 Out-of-frame Intra-chr p23.3 Transcription factor Seq+ 33785 ChimerSeq STARFusion TCGA_RNA-Seq DPYD-MIR137HG DPYD chr1 98157273 - MIR137HG chr1 98460556 - Exonic hg19 LUAD TCGA-95-7567-01A 10 41 CDS-3'UTR Intra-chr p21.3 Oncogene p21.3 33786 ChimerSeq STARFusion TCGA_RNA-Seq ATP11A-MCF2L ATP11A chr13 113344769 + MCF2L chr13 113669077 + Exonic hg19 LUAD TCGA-95-7567-01A 3 4 Out-of-frame Intra-chr q34 q34 Seq+ 33787 ChimerSeq STARFusion TCGA_RNA-Seq FRYL-OCIAD2 FRYL chr4 48712536 - OCIAD2 chr4 48896070 - Exonic hg19 LUAD TCGA-64-5774-01A 22 96 5'UTR-CDS Intra-chr p11 p11 Seq+ 33788 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 LUAD TCGA-75-6203-01A 6 17 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 33789 ChimerSeq STARFusion TCGA_RNA-Seq MICALL2-LOC100507412 MICALL2 chr7 1498820 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LUAD TCGA-NJ-A4YF-01A 21 97 CDS-5'UTR Inter-chr p22.3 33790 ChimerSeq STARFusion TCGA_RNA-Seq STK11-HMHA1 STK11 chr19 1222005 + HMHA1 chr19 1080254 + Exonic hg19 LUAD TCGA-NJ-A4YF-01A 18 40 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene Seq+ 33791 ChimerSeq STARFusion TCGA_RNA-Seq FAM168A-RAB6A FAM168A chr11 73308968 - RAB6A chr11 73390765 - Exonic hg19 LUAD TCGA-NJ-A4YF-01A 9 37 5'UTR-CDS Intra-chr q13.4 q13.4 Seq+ 33792 ChimerSeq STARFusion TCGA_RNA-Seq ZNF618-LOC100507412 ZNF618 chr9 116731440 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LUAD TCGA-NJ-A4YF-01A 7 40 CDS-5'UTR Inter-chr q32 Transcription factor 33793 ChimerSeq STARFusion TCGA_RNA-Seq ZNF490-PRDX2 ZNF490 chr19 12719972 - PRDX2 chr19 12907980 - Exonic hg19 LUAD TCGA-NJ-A4YF-01A 5 40 Out-of-frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 33794 ChimerSeq STARFusion TCGA_RNA-Seq DDIT3-LOC100506844 DDIT3 chr12 57914203 - LOC100506844 chr12 58329338 - Exonic hg19 LUAD TCGA-NJ-A4YF-01A 3 41 Out-of-frame Intra-chr q13.3 Oncogene Transcription factor 33795 ChimerSeq STARFusion TCGA_RNA-Seq DDIT3-LOC100506844 DDIT3 chr12 57914201 - LOC100506844 chr12 58329336 - Exonic hg19 LUAD TCGA-NJ-A4YF-01A 3 41 5'UTR-3'UTR Intra-chr q13.3 Oncogene Transcription factor 33796 ChimerSeq STARFusion TCGA_RNA-Seq C16orf52-OTOA C16orf52 chr16 22019728 + OTOA chr16 21752042 + Exonic hg19 LUAD TCGA-NJ-A4YF-01A 8 11 In-Frame Intra-chr p12.2 Seq+ 33797 ChimerSeq STARFusion TCGA_RNA-Seq LOC100271836-STX4 LOC100271836 chr16 21495693 - STX4 chr16 31049247 + Exonic hg19 LUAD TCGA-NJ-A4YF-01A 3 21 Out-of-frame Intra-chr p11.2 33798 ChimerSeq STARFusion TCGA_RNA-Seq IGF2R-WTAP IGF2R chr6 160495007 + WTAP chr6 160163120 + Exonic hg19 LUAD TCGA-NJ-A4YF-01A 3 10 Out-of-frame Intra-chr q25.3 Oncogene Tumor suppressor gene q25.3 Seq+ 33799 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2NL-SEC22B NOTCH2NL chr1 145209436 + SEC22B chr1 145109524 + Exonic hg19 LUAD TCGA-NJ-A4YF-01A 3 8 5'UTR-CDS Intra-chr q21.1 p12 33800 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1199-ARNT2 KIAA1199 chr15 81214478 + ARNT2 chr15 80743221 + Exonic hg19 LUAD TCGA-NJ-A4YF-01A 2 11 Out-of-frame Intra-chr q25.1 Transcription factor 33801 ChimerSeq STARFusion TCGA_RNA-Seq NBPF1-ZDHHC18 NBPF1 chr1 16939833 - ZDHHC18 chr1 27175099 + Exonic hg19 LUAD TCGA-NJ-A4YF-01A 3 2 5'UTR-CDS Intra-chr p36.13 p36.11 33802 ChimerSeq STARFusion TCGA_RNA-Seq FAAH-RAD54L FAAH chr1 46872040 + RAD54L chr1 46733131 + Exonic hg19 LUAD TCGA-NJ-A4YF-01A 2 5 In-Frame Intra-chr p33 p34.1 Seq+ 33803 ChimerSeq STARFusion TCGA_RNA-Seq NDUFC2-GAB2 NDUFC2 chr11 77790625 - GAB2 chr11 77961446 - Exonic hg19 LUAD TCGA-NJ-A4YF-01A 2 5 In-Frame Intra-chr q14.1 q14.1 33804 ChimerSeq STARFusion TCGA_RNA-Seq KIF1A-C2orf54 KIF1A chr2 241682346 - C2orf54 chr2 241831180 - Exonic hg19 LUAD TCGA-NJ-A4YF-01A 2 4 In-Frame Intra-chr q37.3 q37.3 Seq+ 33805 ChimerSeq STARFusion TCGA_RNA-Seq PPM1B-ABCG8 PPM1B chr2 44445676 + ABCG8 chr2 44071646 + Exonic hg19 LUAD TCGA-NJ-A4YF-01A 2 4 In-Frame Intra-chr p21 p21 Seq+ 33806 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2-PDE4DIP NOTCH2 chr1 120466260 - PDE4DIP chr1 144994701 - Exonic hg19 LUAD TCGA-NJ-A4YF-01A 2 1 Out-of-frame Intra-chr p12 Oncogene Tumor suppressor gene q21.2 Oncogene 33807 ChimerSeq STARFusion TCGA_RNA-Seq RALGDS-SLC2A6 RALGDS chr9 136024350 - SLC2A6 chr9 136343538 - Exonic hg19 LUAD TCGA-NJ-A4YF-01A 2 1 Out-of-frame Intra-chr q34.2 Oncogene 33808 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57886157 + Exonic hg19 LUAD TCGA-62-A46O-01A 13 36 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 33809 ChimerSeq STARFusion TCGA_RNA-Seq YAP1-C11orf70 YAP1 chr11 101985125 + C11orf70 chr11 101951946 + Exonic hg19 LUAD TCGA-62-A46O-01A 9 15 In-Frame Intra-chr q22.1 Tumor suppressor gene q22.1 Seq+ 33810 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57987972 + VMP1 chr17 57886157 + Exonic hg19 LUAD TCGA-62-A46O-01A 2 36 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 33811 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-PLEKHG6 ETV6 chr12 11803094 + PLEKHG6 chr12 6424171 + Exonic hg19 LUAD TCGA-62-A46O-01A 6 17 In-Frame Intra-chr p13.2 Tumor suppressor gene Transcription factor p13.31 Seq+ 33812 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-PLEKHG6 ETV6 chr12 11803094 + PLEKHG6 chr12 6424720 + Exonic hg19 LUAD TCGA-62-A46O-01A 5 17 In-Frame Intra-chr p13.2 Tumor suppressor gene Transcription factor p13.31 Seq+ 33813 ChimerSeq STARFusion TCGA_RNA-Seq MAPK1-TOP3B MAPK1 chr22 22221612 - TOP3B chr22 22313604 - Exonic hg19 LUAD TCGA-62-A46O-01A 2 19 Out-of-frame Intra-chr q11.22 Oncogene q11.22 Seq+ 33814 ChimerSeq STARFusion TCGA_RNA-Seq ZNF180-EML2 ZNF180 chr19 45001336 - EML2 chr19 46113046 - Exonic hg19 LUAD TCGA-62-A46O-01A 2 6 In-Frame Intra-chr q13.31 Transcription factor q13.32 33815 ChimerSeq STARFusion TCGA_RNA-Seq NAA10-HCFC1 NAA10 chrX 153196216 - HCFC1 chrX 153218409 - Exonic hg19 LUAD TCGA-62-A46O-01A 2 1 In-Frame Intra-chr q28 q28 33816 ChimerSeq STARFusion TCGA_RNA-Seq TSNARE1-COL22A1 TSNARE1 chr8 143365774 - COL22A1 chr8 139833654 - Exonic hg19 LUAD TCGA-J2-A4AE-01A 2 17 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 33817 ChimerSeq STARFusion TCGA_RNA-Seq CDK10-C16orf55 CDK10 chr16 89758924 + C16orf55 chr16 89735694 + Exonic hg19 LUAD TCGA-78-7150-01A 28 82 Out-of-frame Intra-chr q24.3 CMGC:CDK Seq+ 33818 ChimerSeq STARFusion TCGA_RNA-Seq UBAP2-APTX UBAP2 chr9 34017048 - APTX chr9 32988122 - Exonic hg19 LUAD TCGA-78-7150-01A 5 68 CDS-3'UTR Intra-chr p13.3 p21.1 Seq+ 33819 ChimerSeq STARFusion TCGA_RNA-Seq UBAP2-APTX UBAP2 chr9 34017048 - APTX chr9 32987844 - Exonic hg19 LUAD TCGA-78-7150-01A 4 68 CDS-3'UTR Intra-chr p13.3 p21.1 Seq+ 33820 ChimerSeq STARFusion TCGA_RNA-Seq UBAP2-APTX UBAP2 chr9 34017048 - APTX chr9 32988127 - Exonic hg19 LUAD TCGA-78-7150-01A 3 68 Out-of-frame Intra-chr p13.3 p21.1 Seq+ 33821 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN4-EPS8L2 TSPAN4 chr11 850367 + EPS8L2 chr11 720062 + Exonic hg19 LUAD TCGA-78-7150-01A 12 26 In-Frame Intra-chr p15.5 p15.5 Seq+ 33822 ChimerSeq STARFusion TCGA_RNA-Seq SOCS7-RSF1 SOCS7 chr17 36533668 + RSF1 chr11 77475734 - Exonic hg19 LUAD TCGA-78-7150-01A 6 33 In-Frame Inter-chr q12 q14.1 Seq+ 33823 ChimerSeq STARFusion TCGA_RNA-Seq OGFOD1-CRNDE OGFOD1 chr16 56510082 + CRNDE chr16 54957562 - Exonic hg19 LUAD TCGA-78-7150-01A 3 15 CDS-3'UTR Intra-chr q13 q12.2 Seq+ 33824 ChimerSeq STARFusion TCGA_RNA-Seq ATF1-GRIP1 ATF1 chr12 51174021 + GRIP1 chr12 66990707 - Exonic hg19 LUAD TCGA-78-7150-01A 2 12 Out-of-frame Intra-chr q13.12 Oncogene Transcription factor q14.3 Seq+ 33825 ChimerSeq STARFusion TCGA_RNA-Seq KIF21A-TMTC2 KIF21A chr12 39836729 - TMTC2 chr12 83424577 + Exonic hg19 LUAD TCGA-78-7150-01A 2 10 Out-of-frame Intra-chr q12 q21.31 Seq+ 33826 ChimerSeq STARFusion TCGA_RNA-Seq MED15-IGH@ MED15 chr22 20928093 + IGH@ chr14 106330057 - Exonic hg19 LUAD TCGA-49-AAR4 29 1 Out-of-frame Inter-chr q11.21 32.33 33827 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-TMC8 IGL@ chr22 23101698 + TMC8 chr17 76127685 + Exonic hg19 LUAD TCGA-49-AAR4 14 0 Out-of-frame Inter-chr q11.22 q25.3 33828 ChimerSeq STARFusion TCGA_RNA-Seq MED15-IGH@ MED15 chr22 20928093 + IGH@ chr14 106330458 - Exonic hg19 LUAD TCGA-49-AAR4 13 1 Out-of-frame Inter-chr q11.21 32.33 33829 ChimerSeq STARFusion TCGA_RNA-Seq LDLR-SMARCA4 LDLR chr19 11234020 + SMARCA4 chr19 11172460 + Exonic hg19 LUAD TCGA-49-AAR4 4 30 Out-of-frame Intra-chr p13.2 p13.2 Oncogene Tumor suppressor gene Seq+ 33830 ChimerSeq STARFusion TCGA_RNA-Seq MED15-IGH@ MED15 chr22 20928093 + IGH@ chr14 106331650 - Exonic hg19 LUAD TCGA-49-AAR4 10 1 Out-of-frame Inter-chr q11.21 32.33 33831 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-FN1 IGH@ chr14 106780513 - FN1 chr2 216235093 - Exonic hg19 LUAD TCGA-49-AAR4 3 3 Out-of-frame Inter-chr 32.33 q35 Oncogene 33832 ChimerSeq STARFusion TCGA_RNA-Seq THOC1-C18orf56 THOC1 chr18 260186 - C18orf56 chr18 649964 - Exonic hg19 LUAD TCGA-49-AAR4 2 4 CDS-3'UTR Intra-chr p11.32 33833 ChimerSeq STARFusion TCGA_RNA-Seq EYA3-GUCA1C EYA3 chr1 28415035 - GUCA1C chr3 108639432 - Exonic hg19 LUAD TCGA-49-AAR3 10 49 5'UTR-CDS Inter-chr p35.3 q13.13 Seq+ 33834 ChimerSeq STARFusion TCGA_RNA-Seq SMURF1-SLC26A5 SMURF1 chr7 98718769 - SLC26A5 chr7 102993373 - Exonic hg19 LUAD TCGA-49-AAR0 9 33 Out-of-frame Intra-chr q22.1 Seq+ 33835 ChimerSeq STARFusion TCGA_RNA-Seq GTF2IRD1-ZAN GTF2IRD1 chr7 73953090 + ZAN chr7 100389588 + Exonic hg19 LUAD TCGA-49-AAR0 8 7 Out-of-frame Intra-chr q11.23 Transcription factor q22.1 Seq+ 33836 ChimerSeq STARFusion TCGA_RNA-Seq SMURF1-DNAJC2 SMURF1 chr7 98741349 - DNAJC2 chr7 102982401 - Exonic hg19 LUAD TCGA-49-AAR0 4 21 In-Frame Intra-chr q22.1 Seq+ 33837 ChimerSeq STARFusion TCGA_RNA-Seq SMURF1-DNAJC2 SMURF1 chr7 98741349 - DNAJC2 chr7 102982312 - Exonic hg19 LUAD TCGA-49-AAR0 3 21 In-Frame Intra-chr q22.1 Seq+ 33838 ChimerSeq STARFusion TCGA_RNA-Seq SCFD2-NARS2 SCFD2 chr4 54218765 - NARS2 chr11 78180359 - Exonic hg19 LUAD TCGA-86-8074-01A 13 60 In-Frame Inter-chr q12 q14.1 Seq+ 33839 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-KCNE3 UVRAG chr11 75563045 + KCNE3 chr11 74173148 - Exonic hg19 LUAD TCGA-86-8074-01A 2 18 CDS-5'UTR Intra-chr q13.5 Tumor suppressor gene q13.4 Seq+ 33840 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 LUAD TCGA-86-8074-01A 3 7 3'UTR-5'UTR Intra-chr q34 33841 ChimerSeq STARFusion TCGA_RNA-Seq CYTH3-SPATA18 CYTH3 chr7 6217454 - SPATA18 chr4 52935987 + Exonic hg19 LUAD TCGA-86-8074-01A 2 6 In-Frame Inter-chr p22.1 q12 Seq+ 33842 ChimerSeq STARFusion TCGA_RNA-Seq TUBD1-VMP1 TUBD1 chr17 57968192 - VMP1 chr17 57915656 + Exonic hg19 LUAD TCGA-86-8074-01A 2 0 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 33843 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-FAM19A5 TNRC6B chr22 40552186 + FAM19A5 chr22 49145651 + Exonic hg19 LUAD TCGA-44-7659-01A 2 7 Out-of-frame Intra-chr q13.1 q13.32 Seq+ 33844 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-ZC3H7B TNRC6B chr22 40441002 + ZC3H7B chr22 41751473 + Exonic hg19 LUAD TCGA-44-7659-01A 2 3 5'UTR-CDS Intra-chr q13.1 q13.2 Seq+ 33845 ChimerSeq STARFusion TCGA_RNA-Seq ASAP2-MBOAT2 ASAP2 chr2 9437574 + MBOAT2 chr2 9098771 - Exonic hg19 LUAD TCGA-49-AAR9 15 35 In-Frame Intra-chr p25.1 p25.1 Seq+ 33846 ChimerSeq STARFusion TCGA_RNA-Seq ASAP2-MBOAT2 ASAP2 chr2 9458727 + MBOAT2 chr2 9098771 - Exonic hg19 LUAD TCGA-49-AAR9 5 35 In-Frame Intra-chr p25.1 p25.1 Seq+ 33847 ChimerSeq STARFusion TCGA_RNA-Seq EZH2-TMEM176B EZH2 chr7 148581256 - TMEM176B chr7 150493662 - Exonic hg19 LUAD TCGA-49-AAR9 3 3 5'UTR-5'UTR Intra-chr q36.1 Oncogene Tumor suppressor gene q36.1 Seq+ 33848 ChimerSeq STARFusion TCGA_RNA-Seq SLC38A10-TESPA1 SLC38A10 chr17 79268623 - TESPA1 chr12 55359935 - Exonic hg19 LUAD TCGA-49-AAR9 2 7 Out-of-frame Inter-chr q25.3 q13.2 Seq+ 33849 ChimerSeq STARFusion TCGA_RNA-Seq CHD6-CNBD2 CHD6 chr20 40246979 - CNBD2 chr20 34560551 + Exonic hg19 LUAD TCGA-49-4501-01A 5 6 Out-of-frame Intra-chr q12 q11.23 Seq+ 33850 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-MDM2 FRS2 chr12 69925836 + MDM2 chr12 69202988 + Exonic hg19 LUAD TCGA-49-4501-01A 2 13 5'UTR-CDS Intra-chr q15 q15 Oncogene Seq+ 33851 ChimerSeq STARFusion TCGA_RNA-Seq SLC2A13-RAB3IP SLC2A13 chr12 40223905 - RAB3IP chr12 70209144 + Exonic hg19 LUAD TCGA-49-4501-01A 2 13 Out-of-frame Intra-chr q12 q15 Seq+ 33852 ChimerSeq STARFusion TCGA_RNA-Seq LRRK2-CCT2 LRRK2 chr12 40681341 + CCT2 chr12 69985839 + Exonic hg19 LUAD TCGA-49-4501-01A 2 4 In-Frame Intra-chr q12 TKL:LRRK q15 Seq+ 33853 ChimerSeq STARFusion TCGA_RNA-Seq MX1-LOC100507412 MX1 chr21 42799231 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LUAD TCGA-49-4501-01A 2 1 5'UTR-5'UTR Inter-chr q22.3 33854 ChimerSeq STARFusion TCGA_RNA-Seq TMED2-FAM101A TMED2 chr12 124074996 + FAM101A chr12 124796364 + Exonic hg19 LUAD TCGA-86-6851-01A 16 73 CDS-5'UTR Intra-chr q24.31 33855 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC17-RNFT2 ZDHHC17 chr12 77158109 + RNFT2 chr12 117271597 + Exonic hg19 LUAD TCGA-86-6851-01A 3 4 In-Frame Intra-chr q21.2 q24.22 Seq+ 33856 ChimerSeq STARFusion TCGA_RNA-Seq GRB2-SLC25A19 GRB2 chr17 73389632 - SLC25A19 chr17 73279674 - Exonic hg19 LUAD TCGA-86-6851-01A 2 1 In-Frame Intra-chr q25.1 q25.1 Seq+ 33857 ChimerSeq STARFusion TCGA_RNA-Seq MUC1-PKLR MUC1 chr1 155161974 - PKLR chr1 155263381 - Exonic hg19 LUAD TCGA-91-A4BD-01A 2 3 In-Frame Intra-chr q22 Oncogene q22 Seq+ 33858 ChimerSeq STARFusion TCGA_RNA-Seq FOCAD-PTPLAD2 FOCAD chr9 20882055 + PTPLAD2 chr9 21008145 - Exonic hg19 LUAD TCGA-75-7027-01A 10 38 In-Frame Intra-chr p21.3 Tumor suppressor gene 33859 ChimerSeq STARFusion TCGA_RNA-Seq NFIB-PTPRD NFIB chr9 14120439 - PTPRD chr9 9574781 - Exonic hg19 LUAD TCGA-75-7027-01A 2 2 CDS-5'UTR Intra-chr p22.3 Transcription factor Oncogene Tumor suppressor gene 33860 ChimerSeq STARFusion TCGA_RNA-Seq TOP1-CDH4 TOP1 chr20 39658095 + CDH4 chr20 60318619 + Exonic hg19 LUAD TCGA-05-4244-01A 43 78 In-Frame Intra-chr q12 Oncogene q13.33 Tumor suppressor gene Seq+ 33861 ChimerSeq STARFusion TCGA_RNA-Seq PAFAH1B2-LOC100507412 PAFAH1B2 chr11 117023244 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LUAD TCGA-05-4244-01A 14 44 CDS-5'UTR Inter-chr q23.3 33862 ChimerSeq STARFusion TCGA_RNA-Seq MYO6-SENP6 MYO6 chr6 76459140 + SENP6 chr6 76385151 + Exonic hg19 LUAD TCGA-05-4244-01A 4 12 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 33863 ChimerSeq STARFusion TCGA_RNA-Seq MYO6-SENP6 MYO6 chr6 76459140 + SENP6 chr6 76385576 + Exonic hg19 LUAD TCGA-05-4244-01A 2 12 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 33864 ChimerSeq STARFusion TCGA_RNA-Seq NCOA6-TCFL5 NCOA6 chr20 33324494 - TCFL5 chr20 61473449 - Exonic hg19 LUAD TCGA-05-4244-01A 2 6 Out-of-frame Intra-chr q11.22 q13.33 Transcription factor Seq+ 33865 ChimerSeq STARFusion TCGA_RNA-Seq PTN-LOC100129148 PTN chr7 137028185 - LOC100129148 chr7 139108131 - Exonic hg19 LUAD TCGA-50-5045-01A 5 6 5'UTR-3'UTR Intra-chr q33 33866 ChimerSeq STARFusion TCGA_RNA-Seq HIF1A-PRKCH HIF1A chr14 62207906 + PRKCH chr14 61995793 + Exonic hg19 LUAD TCGA-44-2668-01A 21 181 In-Frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 Seq+ 33867 ChimerSeq STARFusion TCGA_RNA-Seq TEN1-KIAA0195 TEN1 chr17 73975592 + KIAA0195 chr17 73467881 + Exonic hg19 LUAD TCGA-44-2668-01A 5 13 5'UTR-5'UTR Intra-chr q25.1 33868 ChimerSeq STARFusion TCGA_RNA-Seq BCL3-IGSF23 BCL3 chr19 45262098 + IGSF23 chr19 45130717 + Exonic hg19 LUAD TCGA-44-2668-01A 5 7 In-Frame Intra-chr q13.32 Oncogene q13.31 Seq+ 33869 ChimerSeq STARFusion TCGA_RNA-Seq SLC16A1-SENP6 SLC16A1 chr1 113471714 - SENP6 chr6 76331248 + Exonic hg19 LUAD TCGA-44-2668-01A 3 8 In-Frame Inter-chr q14.1 Seq+ 33870 ChimerSeq STARFusion TCGA_RNA-Seq TBCD-FOXK2 TBCD chr17 80739597 + FOXK2 chr17 80544939 + Exonic hg19 LUAD TCGA-44-2668-01A 3 4 Out-of-frame Intra-chr q25.3 Transcription factor Seq+ 33871 ChimerSeq STARFusion TCGA_RNA-Seq ERO1L-PARP1 ERO1L chr14 53145152 - PARP1 chr1 226553741 - Exonic hg19 LUAD TCGA-44-2668-01A 3 1 In-Frame Inter-chr q42.12 Oncogene Tumor suppressor gene 33872 ChimerSeq STARFusion TCGA_RNA-Seq RSBN1L-PTPN12 RSBN1L chr7 77398120 + PTPN12 chr7 77214860 + Exonic hg19 LUAD TCGA-44-2668-01A 2 3 Out-of-frame Intra-chr q11.23 q11.23 Tumor suppressor gene Seq+ 33873 ChimerSeq STARFusion TCGA_RNA-Seq SLC34A2-ROS1 SLC34A2 chr4 25678324 + ROS1 chr6 117650609 - Exonic hg19 LUAD TCGA-62-A46Y-01A 108 892 Out-of-frame Inter-chr p15.2 q22.1 Oncogene KB Pub Seq+ 33874 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 LUAD TCGA-62-A46Y-01A 2 1 3'UTR-5'UTR Intra-chr q34 33875 ChimerSeq STARFusion TCGA_RNA-Seq GSE1-USP10 GSE1 chr16 85647004 + USP10 chr16 84792322 + Exonic hg19 LUAD TCGA-80-5611-01A 24 60 Out-of-frame Intra-chr q24.1 q24.1 33876 ChimerSeq STARFusion TCGA_RNA-Seq FHDC1-ARFIP1 FHDC1 chr4 153875471 + ARFIP1 chr4 153831216 + Exonic hg19 LUAD TCGA-80-5611-01A 13 74 In-Frame Intra-chr q31.3 q31.3 Seq+ 33877 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-SPNS3 YWHAE chr17 1264386 - SPNS3 chr17 4381867 + Exonic hg19 LUAD TCGA-80-5611-01A 7 12 Out-of-frame Intra-chr p13.3 p13.2 Seq+ 33878 ChimerSeq STARFusion TCGA_RNA-Seq AHCYL1-LRRIQ3 AHCYL1 chr1 110527794 + LRRIQ3 chr1 74575237 - Exonic hg19 LUAD TCGA-80-5611-01A 2 9 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p31.1 Seq+ 33879 ChimerSeq STARFusion TCGA_RNA-Seq ZSCAN22-ZNF418 ZSCAN22 chr19 58838480 + ZNF418 chr19 58434657 - Exonic hg19 LUAD TCGA-80-5611-01A 3 5 5'UTR-3'UTR Intra-chr q13.43 Transcription factor q13.43 Transcription factor Seq+ 33880 ChimerSeq STARFusion TCGA_RNA-Seq CPNE8-CNTN1 CPNE8 chr12 39266806 - CNTN1 chr12 41408030 + Exonic hg19 LUAD TCGA-80-5611-01A 2 6 Out-of-frame Intra-chr q12 q12 Seq+ 33881 ChimerSeq STARFusion TCGA_RNA-Seq TRIP12-SLC16A14 TRIP12 chr2 230723488 - SLC16A14 chr2 230902247 - Exonic hg19 LUAD TCGA-95-A4VP-01A 5 16 In-Frame Intra-chr q36.3 q36.3 Seq+ 33882 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 LUAD TCGA-95-A4VP-01A 2 0 CDS-5'UTR Intra-chr p12 p12 Transcription factor 33883 ChimerSeq STARFusion TCGA_RNA-Seq VAC14-HYDIN VAC14 chr16 70834700 - HYDIN chr16 70913659 - Exonic hg19 LUAD TCGA-44-5645-01B 2 3 Out-of-frame Intra-chr q22.2 Seq+ 33884 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF5-CFDP1 RAPGEF5 chr7 22232985 - CFDP1 chr16 75339080 - Exonic hg19 LUAD TCGA-44-5645-01B 2 1 Out-of-frame Inter-chr p15.3 q23.1 Seq+ 33885 ChimerSeq STARFusion TCGA_RNA-Seq C3orf27-ALMS1 C3orf27 chr3 128294109 - ALMS1 chr2 73646251 + Exonic hg19 LUAD TCGA-44-5645-01B 2 0 5'UTR-CDS Inter-chr p13.1 33886 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57739004 + VMP1 chr17 57915656 + Exonic hg19 LUAD TCGA-38-4625-01A 9 37 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 33887 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57728677 + VMP1 chr17 57886157 + Exonic hg19 LUAD TCGA-38-4625-01A 5 37 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 33888 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-LYRM4 ZFAND3 chr6 37897775 + LYRM4 chr6 5109725 - Exonic hg19 LUAD TCGA-44-2656-01A 43 259 Out-of-frame Intra-chr p21.2 p25.1 Seq+ 33889 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-LYRM4 ZFAND3 chr6 37897775 + LYRM4 chr6 5187214 - Exonic hg19 LUAD TCGA-44-2656-01A 19 259 Out-of-frame Intra-chr p21.2 p25.1 Seq+ 33890 ChimerSeq STARFusion TCGA_RNA-Seq EEF1A2-ZBTB46 EEF1A2 chr20 62124490 - ZBTB46 chr20 62407315 - Exonic hg19 LUAD TCGA-44-2656-01A 2 20 In-Frame Intra-chr q13.33 q13.33 Transcription factor Seq+ 33891 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHG1-MTHFD1L PLEKHG1 chr6 151107595 + MTHFD1L chr6 151355629 + Exonic hg19 LUAD TCGA-44-2656-01A 2 9 In-Frame Intra-chr q25.1 q25.1 Seq+ 33892 ChimerSeq STARFusion TCGA_RNA-Seq STK38L-ARNTL2 STK38L chr12 27397265 + ARNTL2 chr12 27568802 + Exonic hg19 LUAD TCGA-44-2656-01A 2 1 5'UTR-CDS Intra-chr p11.23 p11.23 Transcription factor 33893 ChimerSeq STARFusion TCGA_RNA-Seq UGCG-DNAJC25 UGCG chr9 114677026 + DNAJC25 chr9 114429095 + Exonic hg19 LUAD TCGA-49-AARE 27 99 CDS-3'UTR Intra-chr q31.3 q31.3 Seq+ 33894 ChimerSeq STARFusion TCGA_RNA-Seq UGCG-GNG10 UGCG chr9 114677026 + GNG10 chr9 114429095 + Exonic hg19 LUAD TCGA-49-AARE 27 99 In-Frame Intra-chr q31.3 q31.3 33895 ChimerSeq STARFusion TCGA_RNA-Seq UGCG-DNAJC25 UGCG chr9 114659593 + DNAJC25 chr9 114429095 + Exonic hg19 LUAD TCGA-49-AARE 8 99 CDS-3'UTR Intra-chr q31.3 q31.3 Seq+ 33896 ChimerSeq STARFusion TCGA_RNA-Seq UGCG-GNG10 UGCG chr9 114659593 + GNG10 chr9 114429095 + Exonic hg19 LUAD TCGA-49-AARE 8 99 Out-of-frame Intra-chr q31.3 q31.3 33897 ChimerSeq STARFusion TCGA_RNA-Seq SREBF2-MEI1 SREBF2 chr22 42264796 + MEI1 chr22 42166690 + Exonic hg19 LUAD TCGA-49-AARE 13 46 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 33898 ChimerSeq STARFusion TCGA_RNA-Seq PRCC-RHBG PRCC chr1 156738031 + RHBG chr1 156352539 + Exonic hg19 LUAD TCGA-49-AARE 13 18 Out-of-frame Intra-chr q23.1 q22 Seq+ 33899 ChimerSeq STARFusion TCGA_RNA-Seq SFMBT1-TMEM110 SFMBT1 chr3 53079832 - TMEM110 chr3 52889460 - Exonic hg19 LUAD TCGA-49-AARE 6 22 5'UTR-CDS Intra-chr p21.1 p21.1 33900 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38075947 + MIPOL1 chr14 37969113 + Exonic hg19 LUAD TCGA-49-AARE 4 28 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 33901 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38065213 + MIPOL1 chr14 37969113 + Exonic hg19 LUAD TCGA-49-AARE 4 28 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 33902 ChimerSeq STARFusion TCGA_RNA-Seq ANXA1-CYP1D1P ANXA1 chr9 75777777 + CYP1D1P chr9 75664894 + Exonic hg19 LUAD TCGA-49-AARE 6 18 Out-of-frame Intra-chr q21.13 Tumor suppressor gene q21.13 33903 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38075947 + MIPOL1 chr14 38016110 + Exonic hg19 LUAD TCGA-49-AARE 3 28 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 33904 ChimerSeq STARFusion TCGA_RNA-Seq SLC35E4-SEC14L2 SLC35E4 chr22 31033056 + SEC14L2 chr22 30802331 + Exonic hg19 LUAD TCGA-49-AARE 2 6 In-Frame Intra-chr q12.2 q12.2 Tumor suppressor gene Seq+ 33905 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM2-OS9 R3HDM2 chr12 57649773 - OS9 chr12 58109543 + Exonic hg19 LUAD TCGA-49-AARO 2 16 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 33906 ChimerSeq STARFusion TCGA_RNA-Seq ARAP1-FADD ARAP1 chr11 72412694 - FADD chr11 70052239 + Exonic hg19 LUAD TCGA-44-A4SU-01A 2 12 In-Frame Intra-chr q13.4 q13.3 Tumor suppressor gene Seq+ 33907 ChimerSeq STARFusion TCGA_RNA-Seq KDM4C-KLK7 KDM4C chr9 7049200 + KLK7 chr19 51480947 - Exonic hg19 LUAD TCGA-44-A4SU-01A 2 2 In-Frame Inter-chr p24.1 q13.41 Seq+ 33908 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R12C-CNN2 PPP1R12C chr19 55610152 - CNN2 chr19 1036129 + Exonic hg19 LUAD TCGA-44-A4SU-01A 2 0 In-Frame Intra-chr q13.42 p13.3 Seq+ 33909 ChimerSeq STARFusion TCGA_RNA-Seq PLS1-TEX264 PLS1 chr3 142315351 + TEX264 chr3 51737740 + Exonic hg19 LUAD TCGA-99-8032-01A 2 13 5'UTR-5'UTR Intra-chr q23 p21.2 Seq+ 33910 ChimerSeq STARFusion TCGA_RNA-Seq PBRM1-IGSF11 PBRM1 chr3 52712516 - IGSF11 chr3 118647563 - Exonic hg19 LUAD TCGA-99-8032-01A 2 9 Out-of-frame Intra-chr p21.1 Oncogene Tumor suppressor gene q13.32 Seq+ 33911 ChimerSeq STARFusion TCGA_RNA-Seq RPL28-RNA45S5 RPL28 chr19 55898015 + RNA45S5 chrUn_gl000220 116944 + Exonic hg19 LUAD TCGA-99-8032-01A 3 1 Out-of-frame Inter-chr q13.42 33912 ChimerSeq STARFusion TCGA_RNA-Seq TMEM39A-BBX TMEM39A chr3 119180809 - BBX chr3 107451803 + Exonic hg19 LUAD TCGA-99-8032-01A 2 5 Out-of-frame Intra-chr q13.33 q13.12 Transcription factor Seq+ 33913 ChimerSeq STARFusion TCGA_RNA-Seq EEA1-UBE2N EEA1 chr12 93285405 - UBE2N chr12 93805075 - Exonic hg19 LUAD TCGA-55-A491-01A 12 53 In-Frame Intra-chr q22 Transcription factor q22 Seq+ 33914 ChimerSeq STARFusion TCGA_RNA-Seq PARVA-MICALCL PARVA chr11 12399330 + MICALCL chr11 12341243 + Exonic hg19 LUAD TCGA-55-A491-01A 2 13 In-Frame Intra-chr p15.3 p15.3 Seq+ 33915 ChimerSeq STARFusion TCGA_RNA-Seq URI1-LOC100505835 URI1 chr19 30433571 + LOC100505835 chr19 29501638 + Exonic hg19 LUAD TCGA-55-A491-01A 2 11 5'UTR-5'UTR Intra-chr q12 33916 ChimerSeq STARFusion TCGA_RNA-Seq JAZF1-HIBADH JAZF1 chr7 28220082 - HIBADH chr7 27582719 - Exonic hg19 LUAD TCGA-55-A491-01A 2 7 In-Frame Intra-chr p15.1 Transcription factor p15.2 Seq+ 33917 ChimerSeq STARFusion TCGA_RNA-Seq CCDC22-FOXP3 CCDC22 chrX 49103386 + FOXP3 chrX 49112263 - Exonic hg19 LUAD TCGA-55-1592-01A 24 174 Out-of-frame Intra-chr p11.23 p11.23 Tumor suppressor gene Transcription factor 33918 ChimerSeq STARFusion TCGA_RNA-Seq RARA-STAC2 RARA chr17 38474700 + STAC2 chr17 37374426 - Exonic hg19 LUAD TCGA-55-1592-01A 23 86 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q12 Seq+ 33919 ChimerSeq STARFusion TCGA_RNA-Seq BMP2K-SLC25A31 BMP2K chr4 79786874 + SLC25A31 chr4 128694541 + Exonic hg19 LUAD TCGA-55-1592-01A 15 56 Out-of-frame Intra-chr q21.21 q28.1 Seq+ 33920 ChimerSeq STARFusion TCGA_RNA-Seq SYNRG-KRT33A SYNRG chr17 35936439 - KRT33A chr17 39505680 - Exonic hg19 LUAD TCGA-55-1592-01A 3 21 Out-of-frame Intra-chr Seq+ 33921 ChimerSeq STARFusion TCGA_RNA-Seq FGF13-MST4 FGF13 chrX 138286221 - MST4 chrX 131188659 + Exonic hg19 LUAD TCGA-55-1592-01A 5 11 Out-of-frame Intra-chr q27.1 STE:STE20 33922 ChimerSeq STARFusion TCGA_RNA-Seq CELF1-MYOM1 CELF1 chr11 47574544 - MYOM1 chr18 3131494 - Exonic hg19 LUAD TCGA-55-1592-01A 4 11 5'UTR-CDS Inter-chr p11.2 p11.31 Seq+ 33923 ChimerSeq STARFusion TCGA_RNA-Seq ITPR2-RASSF3 ITPR2 chr12 26943090 - RASSF3 chr12 65078567 + Exonic hg19 LUAD TCGA-55-1592-01A 3 4 Out-of-frame Intra-chr p11.23 q14.2 Tumor suppressor gene Seq+ 33924 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525072 - IGHG1 chr14 106237745 - Exonic hg19 LUAD TCGA-49-AARR 5 1 Out-of-frame Inter-chr q34 Oncogene q32.33 33925 ChimerSeq STARFusion TCGA_RNA-Seq ARMC9-PSMD1 ARMC9 chr2 232079714 + PSMD1 chr2 232035280 + Exonic hg19 LUAD TCGA-49-AARQ 35 158 In-Frame Intra-chr q37.1 q37.1 Seq+ 33926 ChimerSeq STARFusion TCGA_RNA-Seq PACSIN2-TTLL1 PACSIN2 chr22 43411027 - TTLL1 chr22 43447893 - Exonic hg19 LUAD TCGA-49-AARQ 20 91 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 33927 ChimerSeq STARFusion TCGA_RNA-Seq PVRL4-PFDN2 PVRL4 chr1 161059008 - PFDN2 chr1 161072165 - Exonic hg19 LUAD TCGA-49-AARQ 8 31 Out-of-frame Intra-chr q23.3 Seq+ 33928 ChimerSeq STARFusion TCGA_RNA-Seq SPINT2-SIPA1L3 SPINT2 chr19 38774437 + SIPA1L3 chr19 38698692 + Exonic hg19 LUAD TCGA-49-AARQ 4 29 CDS-3'UTR Intra-chr q13.2 Tumor suppressor gene q13.13 33929 ChimerSeq STARFusion TCGA_RNA-Seq UNKL-KIAA0430 UNKL chr16 1416019 - KIAA0430 chr16 15689086 - Exonic hg19 LUAD TCGA-49-AARQ 5 10 Out-of-frame Intra-chr p13.3 Seq+ 33930 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-RPS16 ACTN4 chr19 39138547 + RPS16 chr19 39926348 - Exonic hg19 LUAD TCGA-44-2662-01A 3 38 CDS-3'UTR Intra-chr q13.2 Seq+ 33931 ChimerSeq STARFusion TCGA_RNA-Seq SNORA50-CNOT1 SNORA50 chr16 58593708 - CNOT1 chr16 58594266 - Exonic hg19 LUAD TCGA-44-2662-01A 6 10 3'UTR-CDS Intra-chr q23.3 q21 33932 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS16-TERT ADAMTS16 chr5 5191903 + TERT chr5 1282739 - Exonic hg19 LUAD TCGA-44-2662-01A 4 7 Out-of-frame Intra-chr p15.32 p15.33 Oncogene Seq+ 33933 ChimerSeq STARFusion TCGA_RNA-Seq MAX-TEX10 MAX chr14 65560426 - TEX10 chr9 103111654 - Exonic hg19 LUAD TCGA-86-7953-01A 31 31 CDS-5'UTR Inter-chr q23.3 Oncogene Tumor suppressor gene Transcription factor q31.1 Seq+ 33934 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF3-RHAG ARHGEF3 chr3 56916320 - RHAG chr6 49587075 - Exonic hg19 LUAD TCGA-86-7953-01A 15 67 Out-of-frame Inter-chr p14.3 p12.3 Seq+ 33935 ChimerSeq STARFusion TCGA_RNA-Seq CD55-C4BPA CD55 chr1 207500182 + C4BPA chr1 207300058 + Exonic hg19 LUAD TCGA-86-7953-01A 11 28 In-Frame Intra-chr q32.2 q32.2 Seq+ 33936 ChimerSeq STARFusion TCGA_RNA-Seq CD55-C4BPA CD55 chr1 207512762 + C4BPA chr1 207317163 + Exonic hg19 LUAD TCGA-86-7953-01A 4 28 In-Frame Intra-chr q32.2 q32.2 Seq+ 33937 ChimerSeq STARFusion TCGA_RNA-Seq ZNF341-CBFA2T2 ZNF341 chr20 32358098 + CBFA2T2 chr20 32232153 + Exonic hg19 LUAD TCGA-86-7953-01A 3 14 Out-of-frame Intra-chr q11.22 Transcription factor q11.21 Seq+ 33938 ChimerSeq STARFusion TCGA_RNA-Seq TRIP12-BARD1 TRIP12 chr2 230744698 - BARD1 chr2 215595232 - Exonic hg19 LUAD TCGA-86-7953-01A 2 4 Out-of-frame Intra-chr q36.3 q35 Tumor suppressor gene Seq+ 33939 ChimerSeq STARFusion TCGA_RNA-Seq MINK1-NQO2 MINK1 chr17 4736935 + NQO2 chr6 3010259 + Exonic hg19 LUAD TCGA-50-8460-01A 9 50 Out-of-frame Inter-chr p13.2 p25.2 Seq+ 33940 ChimerSeq STARFusion TCGA_RNA-Seq TMEM41B-TEKT1 TMEM41B chr11 9321131 - TEKT1 chr17 6719281 - Exonic hg19 LUAD TCGA-50-8460-01A 5 10 In-Frame Inter-chr p15.4 p13.1 Seq+ 33941 ChimerSeq STARFusion TCGA_RNA-Seq EML4-ALK EML4 chr2 42492091 + ALK chr2 29446394 - Exonic hg19 LUAD TCGA-50-8460-01A 3 16 Out-of-frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 33942 ChimerSeq STARFusion TCGA_RNA-Seq SFTPB-SIPA1L3 SFTPB chr2 85892728 - SIPA1L3 chr19 38697883 + Exonic hg19 LUAD TCGA-55-8097-01A 3 2 Out-of-frame Inter-chr p11.2 q13.13 33943 ChimerSeq STARFusion TCGA_RNA-Seq PDE4D-CRABP1 PDE4D chr5 58334686 - CRABP1 chr15 78640269 + Exonic hg19 LUAD TCGA-86-7713-01A 203 413 In-Frame Inter-chr q12.1 q25.1 Seq+ 33944 ChimerSeq STARFusion TCGA_RNA-Seq DDX58-TCERG1L DDX58 chr9 32526059 - TCERG1L chr10 132902617 - Exonic hg19 LUAD TCGA-86-7713-01A 4 15 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q26.3 Seq+ 33945 ChimerSeq STARFusion TCGA_RNA-Seq PRKDC-MYO5A PRKDC chr8 48730011 - MYO5A chr15 52667657 - Exonic hg19 LUAD TCGA-86-7713-01A 4 5 Out-of-frame Inter-chr q11.21 Oncogene q21.2 Seq+ 33946 ChimerSeq STARFusion TCGA_RNA-Seq ZFAT-MRPL15 ZFAT chr8 135669804 - MRPL15 chr8 55049071 + Exonic hg19 LUAD TCGA-86-7713-01A 3 5 Out-of-frame Intra-chr q24.22 Transcription factor q11.23 33947 ChimerSeq STARFusion TCGA_RNA-Seq SPINT2-DPF1 SPINT2 chr19 38755638 + DPF1 chr19 38713348 - Exonic hg19 LUAD TCGA-50-6594-01A 53 88 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 Transcription factor Seq+ 33948 ChimerSeq STARFusion TCGA_RNA-Seq ASPHD2-DDX17 ASPHD2 chr22 26825452 + DDX17 chr22 38888120 - Exonic hg19 LUAD TCGA-50-6594-01A 2 2 5'UTR-CDS Intra-chr q12.1 q13.1 Seq+ 33949 ChimerSeq STARFusion TCGA_RNA-Seq NDC80-TTC39C NDC80 chr18 2610860 + TTC39C chr18 21703798 + Exonic hg19 LUAD TCGA-86-8358-01A 10 20 Out-of-frame Intra-chr p11.32 q11.2 Seq+ 33950 ChimerSeq STARFusion TCGA_RNA-Seq SYNE2-ACTN1 SYNE2 chr14 64319861 + ACTN1 chr14 69378959 - Exonic hg19 LUAD TCGA-86-8358-01A 8 21 5'UTR-5'UTR Intra-chr q23.2 q24.1 Seq+ 33951 ChimerSeq STARFusion TCGA_RNA-Seq SYNE2-ACTN1 SYNE2 chr14 64319796 + ACTN1 chr14 69378961 - Exonic hg19 LUAD TCGA-86-8358-01A 3 21 Out-of-frame Intra-chr q23.2 q24.1 Seq+ 33952 ChimerSeq STARFusion TCGA_RNA-Seq AZIN1-UBR5 AZIN1 chr8 103870241 - UBR5 chr8 103373854 - Exonic hg19 LUAD TCGA-86-8358-01A 3 11 5'UTR-CDS Intra-chr q22.3 q22.3 Oncogene 33953 ChimerSeq STARFusion TCGA_RNA-Seq MTDH-MATN2 MTDH chr8 98673401 + MATN2 chr8 98943181 + Exonic hg19 LUAD TCGA-86-8358-01A 4 4 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 33954 ChimerSeq STARFusion TCGA_RNA-Seq AZIN1-UBR5 AZIN1 chr8 103870241 - UBR5 chr8 103373434 - Exonic hg19 LUAD TCGA-86-8358-01A 2 11 5'UTR-CDS Intra-chr q22.3 q22.3 Oncogene 33955 ChimerSeq STARFusion TCGA_RNA-Seq APOPT1-ASPG APOPT1 chr14 104040507 + ASPG chr14 104578257 + Exonic hg19 LUAD TCGA-86-8358-01A 3 5 Out-of-frame Intra-chr q32.33 q32.33 Seq+ 33956 ChimerSeq STARFusion TCGA_RNA-Seq RAB39A-TECTA RAB39A chr11 107799521 + TECTA chr11 121058541 + Exonic hg19 LUAD TCGA-86-8358-01A 2 9 In-Frame Intra-chr q22.3 q23.3 Seq+ 33957 ChimerSeq STARFusion TCGA_RNA-Seq MARK3-KIF26A MARK3 chr14 103894777 + KIF26A chr14 104618352 + Exonic hg19 LUAD TCGA-86-8358-01A 2 7 In-Frame Intra-chr q32.32 CAMK:CAMKL q32.33 Seq+ 33958 ChimerSeq STARFusion TCGA_RNA-Seq APBA2-NBEAP1 APBA2 chr15 29288009 + NBEAP1 chr15 20876597 - Exonic hg19 LUAD TCGA-86-8358-01A 2 6 5'UTR-3'UTR Intra-chr q11.2 Seq+ 33959 ChimerSeq STARFusion TCGA_RNA-Seq PARP6-MYO9A PARP6 chr15 72545778 - MYO9A chr15 72260466 - Exonic hg19 LUAD TCGA-86-8358-01A 2 3 In-Frame Intra-chr q23 q23 Seq+ 33960 ChimerSeq STARFusion TCGA_RNA-Seq CRKL-SLC25A18 CRKL chr22 21288532 + SLC25A18 chr22 18062511 + Exonic hg19 LUAD TCGA-86-8358-01A 2 2 CDS-5'UTR Intra-chr q11.21 Oncogene q11.21 Seq+ 33961 ChimerSeq STARFusion TCGA_RNA-Seq TMC5-HN1 TMC5 chr16 19441962 + HN1 chr17 73144766 - Exonic hg19 LUAD TCGA-55-A493-01A 30 108 5'UTR-5'UTR Inter-chr p12.3 Seq+ 33962 ChimerSeq STARFusion TCGA_RNA-Seq UBE2G2-GART UBE2G2 chr21 46197214 - GART chr21 34897307 - Exonic hg19 LUAD TCGA-55-A493-01A 7 49 In-Frame Intra-chr q22.3 Seq+ 33963 ChimerSeq STARFusion TCGA_RNA-Seq TUBB2A-SLC22A23 TUBB2A chr6 3155859 - SLC22A23 chr6 3324236 - Exonic hg19 LUAD TCGA-55-A493-01A 5 17 In-Frame Intra-chr p25.2 p25.2 Seq+ 33964 ChimerSeq STARFusion TCGA_RNA-Seq APOE-RELB APOE chr19 45411209 + RELB chr19 45515194 + Exonic hg19 LUAD TCGA-55-A493-01A 3 12 Out-of-frame Intra-chr q13.32 q13.32 Transcription factor 33965 ChimerSeq STARFusion TCGA_RNA-Seq PVRL2-IGSF23 PVRL2 chr19 45349870 + IGSF23 chr19 45127000 + Exonic hg19 LUAD TCGA-55-A493-01A 4 8 Out-of-frame Intra-chr q13.31 Seq+ 33966 ChimerSeq STARFusion TCGA_RNA-Seq PLXNA3-TKTL1 PLXNA3 chrX 153698954 + TKTL1 chrX 153533656 + Exonic hg19 LUAD TCGA-55-A493-01A 2 12 In-Frame Intra-chr q28 q28 Seq+ 33967 ChimerSeq STARFusion TCGA_RNA-Seq WWTR1-ANKUB1 WWTR1 chr3 149374663 - ANKUB1 chr3 149479400 - Exonic hg19 LUAD TCGA-55-A493-01A 2 6 In-Frame Intra-chr q25.1 q25.1 Seq+ 33968 ChimerSeq STARFusion TCGA_RNA-Seq KIF21A-SLC2A13 KIF21A chr12 39836729 - SLC2A13 chr12 40265763 - Exonic hg19 LUAD TCGA-55-A493-01A 2 3 In-Frame Intra-chr q12 q12 Seq+ 33969 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 LUAD TCGA-35-3615-01A 2 4 3'UTR-5'UTR Intra-chr q34 33970 ChimerSeq STARFusion TCGA_RNA-Seq AGSK1-LOC388152 AGSK1 chr15 82764746 - LOC388152 chr15 84868720 - Exonic hg19 LUAD TCGA-67-4679-01B 4 10 Out-of-frame Intra-chr 33971 ChimerSeq STARFusion TCGA_RNA-Seq CPQ-LOC100507412 CPQ chr8 97847408 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LUAD TCGA-49-4490-01A 2 16 CDS-5'UTR Inter-chr q22.1 33972 ChimerSeq STARFusion TCGA_RNA-Seq CNOT2-KCNMB4 CNOT2 chr12 70672054 + KCNMB4 chr12 70793989 + Exonic hg19 LUAD TCGA-49-4490-01A 2 9 In-Frame Intra-chr q15 q15 33973 ChimerSeq STARFusion TCGA_RNA-Seq MAGI1-PARD6G MAGI1 chr3 65607647 - PARD6G chr18 77960815 - Exonic hg19 LUAD TCGA-49-4490-01A 2 1 Out-of-frame Inter-chr Oncogene q23 Seq+ 33974 ChimerSeq STARFusion TCGA_RNA-Seq NPC1-FGD4 NPC1 chr18 21124924 - FGD4 chr12 32751431 + Exonic hg19 LUAD TCGA-05-4395-01A 14 22 In-Frame Inter-chr q11.2 p11.21 Seq+ 33975 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD12-PTPRM ANKRD12 chr18 9137871 + PTPRM chr18 8394474 + Exonic hg19 LUAD TCGA-05-4395-01A 3 24 5'UTR-CDS Intra-chr p11.22 p11.23 Seq+ 33976 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD12-PTPRM ANKRD12 chr18 9136963 + PTPRM chr18 8394474 + Exonic hg19 LUAD TCGA-05-4395-01A 3 24 5'UTR-CDS Intra-chr p11.22 p11.23 Seq+ 33977 ChimerSeq STARFusion TCGA_RNA-Seq PEX14-KIF1B PEX14 chr1 10535059 + KIF1B chr1 10434374 + Exonic hg19 LUAD TCGA-05-4395-01A 8 4 Out-of-frame Intra-chr p36.22 p36.22 Tumor suppressor gene Seq+ 33978 ChimerSeq STARFusion TCGA_RNA-Seq CLN6-C15orf59 CLN6 chr15 68521840 - C15orf59 chr15 74032983 - Exonic hg19 LUAD TCGA-05-4395-01A 2 13 Out-of-frame Intra-chr q23 q24.1 Seq+ 33979 ChimerSeq STARFusion TCGA_RNA-Seq RALB-URM1 RALB chr2 121010556 + URM1 chr9 131150095 + Exonic hg19 LUAD TCGA-05-4395-01A 2 2 5'UTR-CDS Inter-chr q14.2 q34.11 Seq+ 33980 ChimerSeq STARFusion TCGA_RNA-Seq ALDH5A1-MAP3K5 ALDH5A1 chr6 24505213 + MAP3K5 chr6 136880014 - Exonic hg19 LUAD TCGA-69-7980-01A 4 12 In-Frame Intra-chr p22.3 q23.3 STE:STE11 Seq+ 33981 ChimerSeq STARFusion TCGA_RNA-Seq SHROOM4-CXorf36 SHROOM4 chrX 50556902 - CXorf36 chrX 45011237 - Exonic hg19 LUAD TCGA-69-7980-01A 5 8 Out-of-frame Intra-chr p11.22 p11.3 Seq+ 33982 ChimerSeq STARFusion TCGA_RNA-Seq RNF216-JAZF1 RNF216 chr7 5680785 - JAZF1 chr7 28031600 - Exonic hg19 LUAD TCGA-69-7980-01A 4 6 Out-of-frame Intra-chr p22.1 p15.1 Transcription factor Seq+ 33983 ChimerSeq STARFusion TCGA_RNA-Seq TARBP1-BTBD7 TARBP1 chr1 234529108 - BTBD7 chr14 93762503 - Exonic hg19 LUAD TCGA-69-7980-01A 2 8 CDS-5'UTR Inter-chr q42.2 Seq+ 33984 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN14-DYDC2 TSPAN14 chr10 82249070 + DYDC2 chr10 82122191 + Exonic hg19 LUAD TCGA-55-1594-01A 6 36 CDS-5'UTR Intra-chr q23.1 q23.1 Seq+ 33985 ChimerSeq STARFusion TCGA_RNA-Seq MIPOL1-SFTA3 MIPOL1 chr14 37667309 + SFTA3 chr14 36946303 - Exonic hg19 LUAD TCGA-55-1594-01A 2 16 5'UTR-CDS Intra-chr q13.3 q13.3 Seq+ 33986 ChimerSeq STARFusion TCGA_RNA-Seq MIPOL1-SFTA3 MIPOL1 chr14 37667309 + SFTA3 chr14 36943086 - Exonic hg19 LUAD TCGA-55-1594-01A 2 16 5'UTR-CDS Intra-chr q13.3 q13.3 Seq+ 33987 ChimerSeq STARFusion TCGA_RNA-Seq CCDC90A-LOC400084 CCDC90A chr6 13799065 - LOC400084 chr12 126451888 - Exonic hg19 LUAD TCGA-55-1594-01A 3 0 CDS-3'UTR Inter-chr 33988 ChimerSeq STARFusion TCGA_RNA-Seq EIF4H-ELN EIF4H chr7 73604636 + ELN chr7 73449694 + Exonic hg19 LUAD TCGA-38-4630-01A 84 374 In-Frame Intra-chr q11.23 q11.23 Seq+ 33989 ChimerSeq STARFusion TCGA_RNA-Seq EIF4H-ELN EIF4H chr7 73604248 + ELN chr7 73449694 + Exonic hg19 LUAD TCGA-38-4630-01A 53 374 In-Frame Intra-chr q11.23 q11.23 Seq+ 33990 ChimerSeq STARFusion TCGA_RNA-Seq CLIC4-GRHL3 CLIC4 chr1 25072116 + GRHL3 chr1 24671387 + Exonic hg19 LUAD TCGA-38-4630-01A 96 188 In-Frame Intra-chr p36.11 p36.11 Transcription factor Seq+ 33991 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-HM13 TPX2 chr20 30330450 + HM13 chr20 30102284 + Exonic hg19 LUAD TCGA-38-4630-01A 43 245 5'UTR-5'UTR Intra-chr q11.21 q11.21 Seq+ 33992 ChimerSeq STARFusion TCGA_RNA-Seq GTF2IRD1-LOC100498859 GTF2IRD1 chr7 73938484 + LOC100498859 chr3 156817272 + Exonic hg19 LUAD TCGA-38-4630-01A 60 113 CDS-5'UTR Inter-chr q11.23 Transcription factor 33993 ChimerSeq STARFusion TCGA_RNA-Seq BCAP31-PDZD4 BCAP31 chrX 152986327 - PDZD4 chrX 153074050 - Exonic hg19 LUAD TCGA-38-4630-01A 36 137 Out-of-frame Intra-chr q28 q28 Seq+ 33994 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-HM13 TPX2 chr20 30327424 + HM13 chr20 30102284 + Exonic hg19 LUAD TCGA-38-4630-01A 6 245 5'UTR-5'UTR Intra-chr q11.21 q11.21 Seq+ 33995 ChimerSeq STARFusion TCGA_RNA-Seq SPEN-CERS4 SPEN chr1 16174645 + CERS4 chr19 8315960 + Exonic hg19 LUAD TCGA-38-4630-01A 31 139 CDS-5'UTR Inter-chr p36.21 Transcription factor p13.2 Seq+ 33996 ChimerSeq STARFusion TCGA_RNA-Seq SPEN-CERS4 SPEN chr1 16174645 + CERS4 chr19 8312329 + Exonic hg19 LUAD TCGA-38-4630-01A 20 139 CDS-5'UTR Inter-chr p36.21 Transcription factor p13.2 Seq+ 33997 ChimerSeq STARFusion TCGA_RNA-Seq WBP1L-SUFU WBP1L chr10 104503900 + SUFU chr10 104352339 + Exonic hg19 LUAD TCGA-38-4630-01A 9 179 Out-of-frame Intra-chr q24.32 q24.32 Oncogene Tumor suppressor gene Seq+ 33998 ChimerSeq STARFusion TCGA_RNA-Seq RCCD1-BLM RCCD1 chr15 91498178 + BLM chr15 91326052 + Exonic hg19 LUAD TCGA-38-4630-01A 15 135 5'UTR-CDS Intra-chr q26.1 q26.1 Oncogene Tumor suppressor gene Seq+ 33999 ChimerSeq STARFusion TCGA_RNA-Seq SPEN-CERS4 SPEN chr1 16174645 + CERS4 chr19 8319383 + Exonic hg19 LUAD TCGA-38-4630-01A 11 139 In-Frame Inter-chr p36.21 Transcription factor p13.2 Seq+ 34000 ChimerSeq STARFusion TCGA_RNA-Seq TGFBRAP1-FHL2 TGFBRAP1 chr2 105912813 - FHL2 chr2 106002997 - Exonic hg19 LUAD TCGA-38-4630-01A 23 90 CDS-5'UTR Intra-chr q12.2 q12.2 Seq+ 34001 ChimerSeq STARFusion TCGA_RNA-Seq RCCD1-BLM RCCD1 chr15 91498178 + BLM chr15 91328151 + Exonic hg19 LUAD TCGA-38-4630-01A 11 135 5'UTR-CDS Intra-chr q26.1 q26.1 Oncogene Tumor suppressor gene Seq+ 34002 ChimerSeq STARFusion TCGA_RNA-Seq RCCD1-BLM RCCD1 chr15 91500955 + BLM chr15 91326052 + Exonic hg19 LUAD TCGA-38-4630-01A 7 135 Out-of-frame Intra-chr q26.1 q26.1 Oncogene Tumor suppressor gene Seq+ 34003 ChimerSeq STARFusion TCGA_RNA-Seq RCCD1-BLM RCCD1 chr15 91500955 + BLM chr15 91328151 + Exonic hg19 LUAD TCGA-38-4630-01A 7 135 In-Frame Intra-chr q26.1 q26.1 Oncogene Tumor suppressor gene Seq+ 34004 ChimerSeq STARFusion TCGA_RNA-Seq RCCD1-BLM RCCD1 chr15 91505004 + BLM chr15 91290619 + Exonic hg19 LUAD TCGA-38-4630-01A 6 135 3'UTR-5'UTR Intra-chr q26.1 q26.1 Oncogene Tumor suppressor gene Seq+ 34005 ChimerSeq STARFusion TCGA_RNA-Seq RCCD1-BLM RCCD1 chr15 91499113 + BLM chr15 91326052 + Exonic hg19 LUAD TCGA-38-4630-01A 2 135 5'UTR-CDS Intra-chr q26.1 q26.1 Oncogene Tumor suppressor gene Seq+ 34006 ChimerSeq STARFusion TCGA_RNA-Seq RCCD1-BLM RCCD1 chr15 91500733 + BLM chr15 91326052 + Exonic hg19 LUAD TCGA-38-4630-01A 2 135 In-Frame Intra-chr q26.1 q26.1 Oncogene Tumor suppressor gene Seq+ 34007 ChimerSeq STARFusion TCGA_RNA-Seq WDR34-ZER1 WDR34 chr9 131402970 - ZER1 chr9 131505024 - Exonic hg19 LUAD TCGA-38-4630-01A 3 119 In-Frame Intra-chr q34.11 q34.11 Seq+ 34008 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-CCDC130 ZSWIM4 chr19 13934314 + CCDC130 chr19 13862422 + Exonic hg19 LUAD TCGA-38-4630-01A 18 59 CDS-5'UTR Intra-chr p13.13 p13.13 Seq+ 34009 ChimerSeq STARFusion TCGA_RNA-Seq SFMBT1-WNT7A SFMBT1 chr3 53003117 - WNT7A chr3 13916670 - Exonic hg19 LUAD TCGA-38-4630-01A 16 50 Out-of-frame Intra-chr p21.1 p25.1 Tumor suppressor gene Seq+ 34010 ChimerSeq STARFusion TCGA_RNA-Seq GRB2-SS18L1 GRB2 chr17 73389632 - SS18L1 chr20 60747738 + Exonic hg19 LUAD TCGA-38-4630-01A 12 65 Out-of-frame Inter-chr q25.1 q13.33 Seq+ 34011 ChimerSeq STARFusion TCGA_RNA-Seq APOPT1-MARK3 APOPT1 chr14 104040507 + MARK3 chr14 103941330 + Exonic hg19 LUAD TCGA-38-4630-01A 6 88 In-Frame Intra-chr q32.33 q32.32 CAMK:CAMKL Seq+ 34012 ChimerSeq STARFusion TCGA_RNA-Seq APOPT1-MARK3 APOPT1 chr14 104040507 + MARK3 chr14 103934370 + Exonic hg19 LUAD TCGA-38-4630-01A 5 88 Out-of-frame Intra-chr q32.33 q32.32 CAMK:CAMKL Seq+ 34013 ChimerSeq STARFusion TCGA_RNA-Seq APOPT1-MARK3 APOPT1 chr14 104053701 + MARK3 chr14 103969219 + Exonic hg19 LUAD TCGA-38-4630-01A 4 88 In-Frame Intra-chr q32.33 q32.32 CAMK:CAMKL Seq+ 34014 ChimerSeq STARFusion TCGA_RNA-Seq RBM17-PFKFB3 RBM17 chr10 6154324 + PFKFB3 chr10 6255586 + Exonic hg19 LUAD TCGA-38-4630-01A 17 36 In-Frame Intra-chr p15.1 p15.1 Seq+ 34015 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1-GSDMB WHSC1 chr4 1957915 + GSDMB chr17 38068750 - Exonic hg19 LUAD TCGA-38-4630-01A 11 59 In-Frame Inter-chr Oncogene q21.1 Seq+ 34016 ChimerSeq STARFusion TCGA_RNA-Seq GRB2-SS18L1 GRB2 chr17 73389632 - SS18L1 chr20 60737808 + Exonic hg19 LUAD TCGA-38-4630-01A 9 65 Out-of-frame Inter-chr q25.1 q13.33 Seq+ 34017 ChimerSeq STARFusion TCGA_RNA-Seq METTL24-SLC22A16 METTL24 chr6 110620125 - SLC22A16 chr6 110778220 - Exonic hg19 LUAD TCGA-38-4630-01A 12 49 Out-of-frame Intra-chr q21 q21 Seq+ 34018 ChimerSeq STARFusion TCGA_RNA-Seq PHF12-PLXDC1 PHF12 chr17 27277083 - PLXDC1 chr17 37296085 - Exonic hg19 LUAD TCGA-38-4630-01A 6 73 Out-of-frame Intra-chr q11.2 q12 Seq+ 34019 ChimerSeq STARFusion TCGA_RNA-Seq APOPT1-MARK3 APOPT1 chr14 104040507 + MARK3 chr14 103969219 + Exonic hg19 LUAD TCGA-38-4630-01A 2 88 Out-of-frame Intra-chr q32.33 q32.32 CAMK:CAMKL Seq+ 34020 ChimerSeq STARFusion TCGA_RNA-Seq PHF12-PLXDC1 PHF12 chr17 27277083 - PLXDC1 chr17 37265644 - Exonic hg19 LUAD TCGA-38-4630-01A 3 73 Out-of-frame Intra-chr q11.2 q12 Seq+ 34021 ChimerSeq STARFusion TCGA_RNA-Seq TOP3A-MYO18A TOP3A chr17 18202873 - MYO18A chr17 27430682 - Exonic hg19 LUAD TCGA-38-4630-01A 5 65 In-Frame Intra-chr q11.2 Oncogene Seq+ 34022 ChimerSeq STARFusion TCGA_RNA-Seq SLC1A3-C20orf196 SLC1A3 chr5 36608706 + C20orf196 chr20 5753508 + Exonic hg19 LUAD TCGA-38-4630-01A 4 63 CDS-5'UTR Inter-chr p13.2 p12.3 Seq+ 34023 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS9-ULK4 ADAMTS9 chr3 64635313 - ULK4 chr3 41877463 - Exonic hg19 LUAD TCGA-38-4630-01A 8 42 In-Frame Intra-chr p14.1 Tumor suppressor gene p22.1 Other:ULK Seq+ 34024 ChimerSeq STARFusion TCGA_RNA-Seq PACS2-RAD51B PACS2 chr14 105836237 + RAD51B chr14 68878141 + Exonic hg19 LUAD TCGA-38-4630-01A 6 49 Out-of-frame Intra-chr q32.33 q24.1 Seq+ 34025 ChimerSeq STARFusion TCGA_RNA-Seq SLBP-TACC3 SLBP chr4 1713601 - TACC3 chr4 1732614 + Exonic hg19 LUAD TCGA-38-4630-01A 5 53 In-Frame Intra-chr p16.3 p16.3 34026 ChimerSeq STARFusion TCGA_RNA-Seq AFMID-TNRC6C AFMID chr17 76187141 + TNRC6C chr17 76060803 + Exonic hg19 LUAD TCGA-38-4630-01A 10 25 In-Frame Intra-chr q25.3 q25.3 Seq+ 34027 ChimerSeq STARFusion TCGA_RNA-Seq CC2D1A-RNF207 CC2D1A chr19 14030015 + RNF207 chr1 6278349 + Exonic hg19 LUAD TCGA-38-4630-01A 9 25 Out-of-frame Inter-chr p13.12 Transcription factor p36.31 Seq+ 34028 ChimerSeq STARFusion TCGA_RNA-Seq POLR2F-MICALL1 POLR2F chr22 38349814 + MICALL1 chr22 38307959 + Exonic hg19 LUAD TCGA-38-4630-01A 7 32 In-Frame Intra-chr q13.1 q13.1 Seq+ 34029 ChimerSeq STARFusion TCGA_RNA-Seq SUV420H1-MTL5 SUV420H1 chr11 67980605 - MTL5 chr11 68480875 - Exonic hg19 LUAD TCGA-38-4630-01A 9 24 5'UTR-CDS Intra-chr Seq+ 34030 ChimerSeq STARFusion TCGA_RNA-Seq SFMBT1-WNT7A SFMBT1 chr3 53003117 - WNT7A chr3 13896300 - Exonic hg19 LUAD TCGA-38-4630-01A 2 50 In-Frame Intra-chr p21.1 p25.1 Tumor suppressor gene Seq+ 34031 ChimerSeq STARFusion TCGA_RNA-Seq UNC45A-BLM UNC45A chr15 91493845 + BLM chr15 91298041 + Exonic hg19 LUAD TCGA-38-4630-01A 7 26 In-Frame Intra-chr q26.1 q26.1 Oncogene Tumor suppressor gene Seq+ 34032 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-MROH5 AGO2 chr8 141557567 - MROH5 chr8 142505583 - Exonic hg19 LUAD TCGA-38-4630-01A 4 37 Out-of-frame Intra-chr q24.3 Seq+ 34033 ChimerSeq STARFusion TCGA_RNA-Seq ITPK1-BTBD7 ITPK1 chr14 93418291 - BTBD7 chr14 93717998 - Exonic hg19 LUAD TCGA-38-4630-01A 8 20 In-Frame Intra-chr Seq+ 34034 ChimerSeq STARFusion TCGA_RNA-Seq USP6NL-ARMC3 USP6NL chr10 11531101 - ARMC3 chr10 23297765 + Exonic hg19 LUAD TCGA-38-4630-01A 5 32 Out-of-frame Intra-chr p14 p12.2 Seq+ 34035 ChimerSeq STARFusion TCGA_RNA-Seq SAR1A-NPFFR1 SAR1A chr10 71930169 - NPFFR1 chr10 72026147 - Exonic hg19 LUAD TCGA-38-4630-01A 5 29 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 34036 ChimerSeq STARFusion TCGA_RNA-Seq TFCP2-BIN2 TFCP2 chr12 51488843 - BIN2 chr12 51696925 - Exonic hg19 LUAD TCGA-38-4630-01A 5 28 3'UTR-CDS Intra-chr q13.13 Transcription factor q13.13 Seq+ 34037 ChimerSeq STARFusion TCGA_RNA-Seq TFCP2-BIN2 TFCP2 chr12 51488936 - BIN2 chr12 51696925 - Exonic hg19 LUAD TCGA-38-4630-01A 4 28 3'UTR-CDS Intra-chr q13.13 Transcription factor q13.13 Seq+ 34038 ChimerSeq STARFusion TCGA_RNA-Seq USP6NL-ARMC3 USP6NL chr10 11531101 - ARMC3 chr10 23297744 + Exonic hg19 LUAD TCGA-38-4630-01A 3 32 Out-of-frame Intra-chr p14 p12.2 Seq+ 34039 ChimerSeq STARFusion TCGA_RNA-Seq MROH1-ZNF623 MROH1 chr8 145255444 + ZNF623 chr8 144732068 + Exonic hg19 LUAD TCGA-38-4630-01A 5 22 Out-of-frame Intra-chr q24.3 Transcription factor Seq+ 34040 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL2-HM13 OSBPL2 chr20 60848462 + HM13 chr20 30102284 + Exonic hg19 LUAD TCGA-38-4630-01A 3 30 CDS-5'UTR Intra-chr q13.33 q11.21 Seq+ 34041 ChimerSeq STARFusion TCGA_RNA-Seq FDFT1-CTSB FDFT1 chr8 11667359 + CTSB chr8 11701750 - Exonic hg19 LUAD TCGA-38-4630-01A 4 25 CDS-3'UTR Intra-chr p23.1 p23.1 34042 ChimerSeq STARFusion TCGA_RNA-Seq GAB2-ALG8 GAB2 chr11 78128692 - ALG8 chr11 77820627 - Exonic hg19 LUAD TCGA-38-4630-01A 4 25 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 34043 ChimerSeq STARFusion TCGA_RNA-Seq SPON1-PIK3R3 SPON1 chr11 14157114 + PIK3R3 chr1 46512297 - Exonic hg19 LUAD TCGA-38-4630-01A 2 33 In-Frame Inter-chr p15.2 p34.1 Seq+ 34044 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-GSDMB STARD3 chr17 37793484 + GSDMB chr17 38061217 - Exonic hg19 LUAD TCGA-38-4630-01A 6 15 5'UTR-CDS Intra-chr q12 q21.1 Seq+ 34045 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL2-HM13 OSBPL2 chr20 60847315 + HM13 chr20 30115287 + Exonic hg19 LUAD TCGA-38-4630-01A 2 30 In-Frame Intra-chr q13.33 q11.21 Seq+ 34046 ChimerSeq STARFusion TCGA_RNA-Seq GAB2-ALG8 GAB2 chr11 78128692 - ALG8 chr11 77817992 - Exonic hg19 LUAD TCGA-38-4630-01A 3 25 In-Frame Intra-chr q14.1 q14.1 Seq+ 34047 ChimerSeq STARFusion TCGA_RNA-Seq FRMD5-MFAP1 FRMD5 chr15 44487151 - MFAP1 chr15 44109646 - Exonic hg19 LUAD TCGA-38-4630-01A 5 15 Out-of-frame Intra-chr q15.3 q15.3 Seq+ 34048 ChimerSeq STARFusion TCGA_RNA-Seq GAB2-ALG8 GAB2 chr11 78128692 - ALG8 chr11 77825438 - Exonic hg19 LUAD TCGA-38-4630-01A 2 25 In-Frame Intra-chr q14.1 q14.1 Seq+ 34049 ChimerSeq STARFusion TCGA_RNA-Seq TMEM189-PXMP4 TMEM189 chr20 48744512 - PXMP4 chr20 32302542 - Exonic hg19 LUAD TCGA-38-4630-01A 5 13 Out-of-frame Intra-chr q13.13 q11.22 Seq+ 34050 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-MYC PVT1 chr8 128903244 + MYC chr8 128750497 + Exonic hg19 LUAD TCGA-38-4630-01A 4 16 5'UTR-CDS Intra-chr q24.21 q24.21 Oncogene Transcription factor KB Pub Seq+ 34051 ChimerSeq STARFusion TCGA_RNA-Seq SLC23A2-PHKB SLC23A2 chr20 4864288 - PHKB chr16 47674946 + Exonic hg19 LUAD TCGA-38-4630-01A 6 6 Out-of-frame Inter-chr p13 q12.1 Seq+ 34052 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0907-ACBD3 KIAA0907 chr1 155884008 - ACBD3 chr1 226334522 - Exonic hg19 LUAD TCGA-38-4630-01A 4 13 Out-of-frame Intra-chr q22 q42.12 Seq+ 34053 ChimerSeq STARFusion TCGA_RNA-Seq NUP210-FBLN2 NUP210 chr3 13393379 - FBLN2 chr3 13679062 + Exonic hg19 LUAD TCGA-38-4630-01A 3 17 Out-of-frame Intra-chr p25.1 p25.1 Seq+ 34054 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL2-TPX2 OSBPL2 chr20 60847315 + TPX2 chr20 30330344 + Exonic hg19 LUAD TCGA-38-4630-01A 2 21 CDS-5'UTR Intra-chr q13.33 q11.21 Seq+ 34055 ChimerSeq STARFusion TCGA_RNA-Seq DSCR4-KCNJ6 DSCR4 chr21 39492401 - KCNJ6 chr21 39213011 - Exonic hg19 LUAD TCGA-38-4630-01A 5 8 CDS-5'UTR Intra-chr q22.13 q22.13 34056 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-MYC PVT1 chr8 128903244 + MYC chr8 128750494 + Exonic hg19 LUAD TCGA-38-4630-01A 3 16 5'UTR-CDS Intra-chr q24.21 q24.21 Oncogene Transcription factor KB Pub Seq+ 34057 ChimerSeq STARFusion TCGA_RNA-Seq PGAM5-PXMP2 PGAM5 chr12 133291622 + PXMP2 chr12 133277836 + Exonic hg19 LUAD TCGA-38-4630-01A 3 13 Out-of-frame Intra-chr q24.33 q24.33 34058 ChimerSeq STARFusion TCGA_RNA-Seq DOCK3-SMARCC1 DOCK3 chr3 50712731 + SMARCC1 chr3 47663831 - Exonic hg19 LUAD TCGA-38-4630-01A 5 4 Out-of-frame Intra-chr p21.2 p21.31 Tumor suppressor gene Seq+ 34059 ChimerSeq STARFusion TCGA_RNA-Seq UBAC1-QSOX2 UBAC1 chr9 138839644 - QSOX2 chr9 139118720 - Exonic hg19 LUAD TCGA-38-4630-01A 3 11 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 34060 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP15-KYNU ARHGAP15 chr2 144008169 + KYNU chr2 143742653 + Exonic hg19 LUAD TCGA-38-4630-01A 4 6 In-Frame Intra-chr q22.2 q22.2 Seq+ 34061 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H3-KIAA0907 ZC3H3 chr8 144618427 - KIAA0907 chr1 155903640 - Exonic hg19 LUAD TCGA-38-4630-01A 2 14 Out-of-frame Inter-chr q22 Seq+ 34062 ChimerSeq STARFusion TCGA_RNA-Seq FKBP2-C11orf84 FKBP2 chr11 64010030 + C11orf84 chr11 63585277 + Exonic hg19 LUAD TCGA-38-4630-01A 3 9 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 34063 ChimerSeq STARFusion TCGA_RNA-Seq LAMA5-CABLES2 LAMA5 chr20 60926760 - CABLES2 chr20 60970070 - Exonic hg19 LUAD TCGA-38-4630-01A 2 13 In-Frame Intra-chr q13.33 q13.33 Seq+ 34064 ChimerSeq STARFusion TCGA_RNA-Seq LINC00620-FBLN2 LINC00620 chr3 13729715 + FBLN2 chr3 13649562 + Exonic hg19 LUAD TCGA-38-4630-01A 4 5 Out-of-frame Intra-chr p25.1 p25.1 34065 ChimerSeq STARFusion TCGA_RNA-Seq TNFSF10-NCEH1 TNFSF10 chr3 172227007 - NCEH1 chr3 172365824 - Exonic hg19 LUAD TCGA-38-4630-01A 3 9 Out-of-frame Intra-chr q26.31 q26.31 Seq+ 34066 ChimerSeq STARFusion TCGA_RNA-Seq TNFSF10-NCEH1 TNFSF10 chr3 172241043 - NCEH1 chr3 172365904 - Exonic hg19 LUAD TCGA-38-4630-01A 3 9 In-Frame Intra-chr q26.31 q26.31 Seq+ 34067 ChimerSeq STARFusion TCGA_RNA-Seq NCEH1-LRCH4 NCEH1 chr3 172363413 - LRCH4 chr7 100175535 - Exonic hg19 LUAD TCGA-38-4630-01A 2 12 Out-of-frame Inter-chr q26.31 q22.1 Seq+ 34068 ChimerSeq STARFusion TCGA_RNA-Seq AP2A2-TALDO1 AP2A2 chr11 959505 + TALDO1 chr11 755879 + Exonic hg19 LUAD TCGA-38-4630-01A 3 6 In-Frame Intra-chr p15.5 p15.5 Seq+ 34069 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1-FAM53A WHSC1 chr4 1957915 + FAM53A chr4 1643334 - Exonic hg19 LUAD TCGA-38-4630-01A 3 6 Out-of-frame Intra-chr Oncogene p16.3 Seq+ 34070 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K13-VPS8 MAP3K13 chr3 185081156 + VPS8 chr3 184769664 + Exonic hg19 LUAD TCGA-38-4630-01A 2 4 5'UTR-CDS Intra-chr q27.2 q27.2 Seq+ 34071 ChimerSeq STARFusion TCGA_RNA-Seq GOLIM4-NCEH1 GOLIM4 chr3 167812887 - NCEH1 chr3 172365904 - Exonic hg19 LUAD TCGA-38-4630-01A 2 2 Out-of-frame Intra-chr q26.2 q26.31 Seq+ 34072 ChimerSeq STARFusion TCGA_RNA-Seq STON1-PPP1R21 STON1 chr2 48757968 + PPP1R21 chr2 48737154 + Exonic hg19 LUAD TCGA-38-4630-01A 2 2 5'UTR-5'UTR Intra-chr p16.3 p16.3 34073 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-WDR18 SBNO2 chr19 1147308 - WDR18 chr19 989762 + Exonic hg19 LUAD TCGA-38-4630-01A 2 1 In-Frame Intra-chr p13.3 p13.3 34074 ChimerSeq STARFusion TCGA_RNA-Seq ZNF260-SCGB2B2 ZNF260 chr19 37016057 - SCGB2B2 chr19 35084504 - Exonic hg19 LUAD TCGA-05-4389-01A 11 63 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.11 Seq+ 34075 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1 FTL chr19 49469041 + FTH1 chr11 61732973 - Exonic hg19 LUAD TCGA-05-4389-01A 6 6 Out-of-frame Inter-chr q13.33 q12.3 34076 ChimerSeq STARFusion TCGA_RNA-Seq PPA2-TBCK PPA2 chr4 106395051 - TBCK chr4 107016798 - Exonic hg19 LUAD TCGA-44-5643-01A 4 18 Out-of-frame Intra-chr q24 q24 Other:TBCK Seq+ 34077 ChimerSeq STARFusion TCGA_RNA-Seq UNK-B4GALNT2 UNK chr17 73781065 + B4GALNT2 chr17 47218609 + Exonic hg19 LUAD TCGA-50-6673-01A 23 126 In-Frame Intra-chr q25.1 q21.32 Seq+ 34078 ChimerSeq STARFusion TCGA_RNA-Seq TMEM107-WRAP53 TMEM107 chr17 8079518 - WRAP53 chr17 7604059 + Exonic hg19 LUAD TCGA-50-6673-01A 29 45 In-Frame Intra-chr p13.1 p13.1 Seq+ 34079 ChimerSeq STARFusion TCGA_RNA-Seq COBL-DUSP14 COBL chr7 51152863 - DUSP14 chr17 35870779 + Exonic hg19 LUAD TCGA-50-6673-01A 11 37 CDS-5'UTR Inter-chr p12.1 q12 Seq+ 34080 ChimerSeq STARFusion TCGA_RNA-Seq RNF170-SFRP1 RNF170 chr8 42742871 - SFRP1 chr8 41123008 - Exonic hg19 LUAD TCGA-50-6673-01A 5 27 Out-of-frame Intra-chr p11.21 p11.21 Tumor suppressor gene Seq+ 34081 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-UNC5D FAM222B chr17 27093604 - UNC5D chr8 35608100 + Exonic hg19 LUAD TCGA-50-6673-01A 3 31 Out-of-frame Inter-chr q11.2 p12 Tumor suppressor gene Seq+ 34082 ChimerSeq STARFusion TCGA_RNA-Seq PDIA4-TADA2A PDIA4 chr7 148701036 - TADA2A chr17 35825535 + Exonic hg19 LUAD TCGA-50-6673-01A 5 7 Out-of-frame Inter-chr q36.1 q12 Seq+ 34083 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-DHX29 SLC39A11 chr17 71027695 - DHX29 chr5 54552368 - Exonic hg19 LUAD TCGA-50-6673-01A 3 2 Out-of-frame Inter-chr q25.1 q11.2 Seq+ 34084 ChimerSeq STARFusion TCGA_RNA-Seq CRIPT-BIRC6 CRIPT chr2 46846820 + BIRC6 chr2 32842792 + Exonic hg19 LUAD TCGA-50-6673-01A 2 3 Out-of-frame Intra-chr p21 p22.3 Seq+ 34085 ChimerSeq STARFusion TCGA_RNA-Seq TFCP2-LACRT TFCP2 chr12 51566084 - LACRT chr12 55027017 - Exonic hg19 LUAD TCGA-50-6673-01A 2 2 Out-of-frame Intra-chr q13.13 Transcription factor q13.2 34086 ChimerSeq STARFusion TCGA_RNA-Seq BICD1-GAS7 BICD1 chr12 32447080 + GAS7 chr17 9923214 - Exonic hg19 LUAD TCGA-50-6673-01A 2 1 In-Frame Inter-chr p11.21 p13.1 34087 ChimerSeq STARFusion TCGA_RNA-Seq SLC6A9-EIF2B3 SLC6A9 chr1 44496978 - EIF2B3 chr1 45363116 - Exonic hg19 LUAD TCGA-44-3917-01A 4 8 5'UTR-CDS Intra-chr p34.1 p34.1 Seq+ 34088 ChimerSeq STARFusion TCGA_RNA-Seq SNORA50-CNOT1 SNORA50 chr16 58593708 - CNOT1 chr16 58594266 - Exonic hg19 LUAD TCGA-44-3917-01A 3 8 3'UTR-CDS Intra-chr q23.3 q21 34089 ChimerSeq STARFusion TCGA_RNA-Seq C1orf95-RBM34 C1orf95 chr1 226736807 + RBM34 chr1 235301489 - Exonic hg19 LUAD TCGA-44-3917-01A 2 4 Out-of-frame Intra-chr q42.3 34090 ChimerSeq STARFusion TCGA_RNA-Seq CAMK1D-ARL3 CAMK1D chr10 12833232 + ARL3 chr10 104465246 - Exonic hg19 LUAD TCGA-44-3917-01A 2 1 Out-of-frame Intra-chr p13 q24.32 Seq+ 34091 ChimerSeq STARFusion TCGA_RNA-Seq MAP2K4-PGGT1B MAP2K4 chr17 11924318 + PGGT1B chr5 114557705 - Exonic hg19 LUAD TCGA-62-A46R-01A 2 1 In-Frame Inter-chr p12 STE:STE7 Oncogene Tumor suppressor gene q22.3 34092 ChimerSeq STARFusion TCGA_RNA-Seq PPP4R1-SOGA2 PPP4R1 chr18 9559417 - SOGA2 chr18 8786053 + Exonic hg19 LUAD TCGA-MN-A4N4-01A 3 17 In-Frame Intra-chr p11.22 34093 ChimerSeq STARFusion TCGA_RNA-Seq SLC34A2-ZCCHC4 SLC34A2 chr4 25664234 + ZCCHC4 chr4 25363481 + Exonic hg19 LUAD TCGA-MN-A4N4-01A 3 16 Out-of-frame Intra-chr p15.2 p15.2 Seq+ 34094 ChimerSeq STARFusion TCGA_RNA-Seq ECSIT-PPAN ECSIT chr19 11639877 - PPAN chr19 10218181 + Exonic hg19 LUAD TCGA-MN-A4N4-01A 3 1 5'UTR-CDS Intra-chr p13.2 p13.2 34095 ChimerSeq STARFusion TCGA_RNA-Seq VKORC1L1-LOC100507412 VKORC1L1 chr7 65338552 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LUAD TCGA-49-4510-01A 77 403 CDS-5'UTR Inter-chr q11.21 34096 ChimerSeq STARFusion TCGA_RNA-Seq TAF4-TSHZ2 TAF4 chr20 60572606 - TSHZ2 chr20 52103683 + Exonic hg19 LUAD TCGA-50-5072-01A 2 6 CDS-3'UTR Intra-chr q13.2 Transcription factor Seq+ 34097 ChimerSeq STARFusion TCGA_RNA-Seq HAS2-HHLA1 HAS2 chr8 122653093 - HHLA1 chr8 133112381 - Exonic hg19 LUAD TCGA-55-8089-01A 26 113 5'UTR-CDS Intra-chr q24.13 q24.22 Seq+ 34098 ChimerSeq STARFusion TCGA_RNA-Seq LINC00265-NXPH1 LINC00265 chr7 39773643 + NXPH1 chr7 8790638 + Exonic hg19 LUAD TCGA-55-8089-01A 26 106 5'UTR-CDS Intra-chr p14.1 p21.3 Seq+ 34099 ChimerSeq STARFusion TCGA_RNA-Seq KLHL7-DNAH11 KLHL7 chr7 23145765 + DNAH11 chr7 21584624 + Exonic hg19 LUAD TCGA-55-8089-01A 12 122 In-Frame Intra-chr p15.3 p15.3 Seq+ 34100 ChimerSeq STARFusion TCGA_RNA-Seq KLHL7-DNAH11 KLHL7 chr7 23146413 + DNAH11 chr7 21584624 + Exonic hg19 LUAD TCGA-55-8089-01A 4 122 5'UTR-CDS Intra-chr p15.3 p15.3 Seq+ 34101 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-VOPP1 EGFR chr7 55087058 + VOPP1 chr7 55588823 - Exonic hg19 LUAD TCGA-55-8089-01A 3 23 Out-of-frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 34102 ChimerSeq STARFusion TCGA_RNA-Seq TNS3-PSPH TNS3 chr7 47621649 - PSPH chr7 56087427 - Exonic hg19 LUAD TCGA-55-8089-01A 2 7 5'UTR-CDS Intra-chr p12.3 p11.2 Seq+ 34103 ChimerSeq STARFusion TCGA_RNA-Seq STEAP1B-POU6F2 STEAP1B chr7 22532184 - POU6F2 chr7 39125460 + Exonic hg19 LUAD TCGA-55-8089-01A 2 6 In-Frame Intra-chr p15.3 p14.1 Tumor suppressor gene Transcription factor Seq+ 34104 ChimerSeq STARFusion TCGA_RNA-Seq SNX29-NLRP1 SNX29 chr16 12497386 + NLRP1 chr17 5487820 - Exonic hg19 LUAD TCGA-97-8552-01A 3 18 CDS-5'UTR Inter-chr p13.13 p13.2 Oncogene Seq+ 34105 ChimerSeq STARFusion TCGA_RNA-Seq NOSIP-NAP1L1 NOSIP chr19 50080016 - NAP1L1 chr12 76444433 - Exonic hg19 LUAD TCGA-97-8552-01A 2 0 5'UTR-CDS Inter-chr q13.33 q21.2 34106 ChimerSeq STARFusion TCGA_RNA-Seq ARRB1-GDPD5 ARRB1 chr11 74993006 - GDPD5 chr11 75173934 - Exonic hg19 LUAD TCGA-MP-A4TC-01A 13 92 In-Frame Intra-chr q13.4 q13.5 Seq+ 34107 ChimerSeq STARFusion TCGA_RNA-Seq RPAP3-SMC6 RPAP3 chr12 48073276 - SMC6 chr2 17851842 - Exonic hg19 LUAD TCGA-MP-A4TC-01A 2 1 In-Frame Inter-chr q13.11 p24.2 34108 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2B-DCAF8 GATAD2B chr1 153895209 - DCAF8 chr1 160210160 - Exonic hg19 LUAD TCGA-62-A46U-01A 30 145 5'UTR-CDS Intra-chr Transcription factor q23.2 Seq+ 34109 ChimerSeq STARFusion TCGA_RNA-Seq SMCHD1-NDC80 SMCHD1 chr18 2688745 + NDC80 chr18 2585112 + Exonic hg19 LUAD TCGA-62-A46U-01A 12 45 In-Frame Intra-chr p11.32 Tumor suppressor gene p11.32 Seq+ 34110 ChimerSeq STARFusion TCGA_RNA-Seq EFTUD2-C1QL1 EFTUD2 chr17 42945175 - C1QL1 chr17 43037735 - Exonic hg19 LUAD TCGA-62-A46U-01A 7 22 In-Frame Intra-chr q21.31 q21.31 Seq+ 34111 ChimerSeq STARFusion TCGA_RNA-Seq MTMR3-SCNN1B MTMR3 chr22 30367051 + SCNN1B chr16 23359913 + Exonic hg19 LUAD TCGA-62-A46U-01A 3 18 CDS-5'UTR Inter-chr q12.2 p12.2 Seq+ 34112 ChimerSeq STARFusion TCGA_RNA-Seq ARMC7-NUP85 ARMC7 chr17 73106701 + NUP85 chr17 73221198 + Exonic hg19 LUAD TCGA-62-A46U-01A 2 7 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 34113 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 LUAD TCGA-62-A46U-01A 3 2 3'UTR-5'UTR Intra-chr q34 34114 ChimerSeq STARFusion TCGA_RNA-Seq MSI2-LOC440434 MSI2 chr17 55335715 + LOC440434 chr17 36353765 - Exonic hg19 LUAD TCGA-62-A46U-01A 2 2 CDS-3'UTR Intra-chr q22 34115 ChimerSeq STARFusion TCGA_RNA-Seq MTUS1-FGL1 MTUS1 chr8 17570723 - FGL1 chr8 17726513 - Exonic hg19 LUAD TCGA-55-8094-01A 69 166 In-Frame Intra-chr p22 Tumor suppressor gene p22 Seq+ 34116 ChimerSeq STARFusion TCGA_RNA-Seq GRB10-DDC GRB10 chr7 50737419 - DDC chr7 50537869 - Exonic hg19 LUAD TCGA-55-8094-01A 48 152 In-Frame Intra-chr p12.1 p12.1 Seq+ 34117 ChimerSeq STARFusion TCGA_RNA-Seq DYNLT3-U2AF2 DYNLT3 chrX 37700281 - U2AF2 chr19 56179873 + Exonic hg19 LUAD TCGA-55-8094-01A 10 82 In-Frame Inter-chr p11.4 q13.42 Seq+ 34118 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-SLC43A2 YWHAE chr17 1257505 - SLC43A2 chr17 1489345 - Exonic hg19 LUAD TCGA-55-8094-01A 16 42 In-Frame Intra-chr p13.3 Seq+ 34119 ChimerSeq STARFusion TCGA_RNA-Seq PAPOLA-AK7 PAPOLA chr14 97022750 + AK7 chr14 96904172 + Exonic hg19 LUAD TCGA-55-8094-01A 4 27 In-Frame Intra-chr q32.2 q32.2 Seq+ 34120 ChimerSeq STARFusion TCGA_RNA-Seq PLAUR-XRCC1 PLAUR chr19 44156377 - XRCC1 chr19 44050258 - Exonic hg19 LUAD TCGA-55-8094-01A 2 2 In-Frame Intra-chr q13.31 q13.31 Seq+ 34121 ChimerSeq STARFusion TCGA_RNA-Seq TUFT1-CGN TUFT1 chr1 151537090 + CGN chr1 151492642 + Exonic hg19 LUAD TCGA-44-6775-01A 3 10 In-Frame Intra-chr q21.3 q21.3 Seq+ 34122 ChimerSeq STARFusion TCGA_RNA-Seq PSMB6-ENO3 PSMB6 chr17 4699591 + ENO3 chr17 4855123 + Exonic hg19 LUAD TCGA-97-8171-01A 14 40 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 34123 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-SGCZ VPS13B chr8 100205285 + SGCZ chr8 14181713 - Exonic hg19 LUAD TCGA-97-8171-01A 3 3 Out-of-frame Intra-chr q22.2 p22 Seq+ 34124 ChimerSeq STARFusion TCGA_RNA-Seq OTUD5-TEX101 OTUD5 chrX 48783123 - TEX101 chr19 43906918 + Exonic hg19 LUAD TCGA-97-8171-01A 2 0 CDS-5'UTR Inter-chr p11.23 q13.31 34125 ChimerSeq STARFusion TCGA_RNA-Seq NCAPD2-VWF NCAPD2 chr12 6603320 + VWF chr12 6059049 - Exonic hg19 LUAD TCGA-55-1596-01A 82 23 5'UTR-CDS Intra-chr p13.31 p13.31 Seq+ 34126 ChimerSeq STARFusion TCGA_RNA-Seq MROH2B-MRPS30 MROH2B chr5 41017952 - MRPS30 chr5 44813208 + Exonic hg19 LUAD TCGA-55-1596-01A 18 96 Out-of-frame Intra-chr p13.1 p12 Seq+ 34127 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K8-MROH2B MAP3K8 chr10 30723307 + MROH2B chr5 41019120 - Exonic hg19 LUAD TCGA-55-1596-01A 11 23 Out-of-frame Inter-chr p11.23 STE:STE11 Tumor suppressor gene p13.1 Seq+ 34128 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57733388 + VMP1 chr17 57915656 + Exonic hg19 LUAD TCGA-55-1596-01A 2 2 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 34129 ChimerSeq STARFusion TCGA_RNA-Seq MPG-SNRNP25 MPG chr16 133255 + SNRNP25 chr16 107086 + Exonic hg19 LUAD TCGA-97-A4M7-01A 32 113 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 34130 ChimerSeq STARFusion TCGA_RNA-Seq MRPL33-RBKS MRPL33 chr2 27997397 + RBKS chr2 28004655 - Exonic hg19 LUAD TCGA-78-7149-01A 7 8 Out-of-frame Intra-chr p23.2 p23.2 Seq+ 34131 ChimerSeq STARFusion TCGA_RNA-Seq KANK1-DOCK8 KANK1 chr9 738504 + DOCK8 chr9 286461 + Exonic hg19 LUAD TCGA-78-7149-01A 2 3 Out-of-frame Intra-chr p24.3 Tumor suppressor gene p24.3 Seq+ 34132 ChimerSeq STARFusion TCGA_RNA-Seq TXNDC5-COX7A2 TXNDC5 chr6 7889728 - COX7A2 chr6 75947704 - Exonic hg19 LUAD TCGA-78-7149-01A 2 1 Out-of-frame Intra-chr p24.3 q14.1 34133 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1432-AARD KIAA1432 chr9 5690038 + AARD chr8 117954797 + Exonic hg19 LUAD TCGA-75-6207-01A 56 98 Out-of-frame Inter-chr q24.11 Seq+ 34134 ChimerSeq STARFusion TCGA_RNA-Seq TRIO-UHRF2 TRIO chr5 14143991 + UHRF2 chr9 6420912 + Exonic hg19 LUAD TCGA-75-6207-01A 11 16 Out-of-frame Inter-chr p15.2 p24.1 Tumor suppressor gene Seq+ 34135 ChimerSeq STARFusion TCGA_RNA-Seq KCTD18-SNED1 KCTD18 chr2 201362476 - SNED1 chr2 242007179 + Exonic hg19 LUAD TCGA-75-6207-01A 3 7 In-Frame Intra-chr q33.1 q37.3 Seq+ 34136 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1432-LOC100506688 KIAA1432 chr9 5629453 + LOC100506688 chr5 990672 - Exonic hg19 LUAD TCGA-75-6207-01A 2 6 CDS-5'UTR Inter-chr 34137 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-LIPI CCDC6 chr10 61612311 - LIPI chr21 15481401 - Exonic hg19 LUAD TCGA-44-8117-01A 8 127 Out-of-frame Inter-chr q21.2 q11.2 Seq+ 34138 ChimerSeq STARFusion TCGA_RNA-Seq UQCRC1-SMARCC1 UQCRC1 chr3 48646595 - SMARCC1 chr3 47632327 - Exonic hg19 LUAD TCGA-44-8117-01A 8 44 Out-of-frame Intra-chr p21.31 p21.31 Tumor suppressor gene Seq+ 34139 ChimerSeq STARFusion TCGA_RNA-Seq JARID2-HSD3B1 JARID2 chr6 15246815 + HSD3B1 chr1 120050015 + Exonic hg19 LUAD TCGA-44-8117-01A 3 11 CDS-5'UTR Inter-chr p22.3 p12 Seq+ 34140 ChimerSeq STARFusion TCGA_RNA-Seq HIRA-ADAM2 HIRA chr22 19393309 - ADAM2 chr8 39627094 - Exonic hg19 LUAD TCGA-44-8117-01A 2 13 Out-of-frame Inter-chr q11.21 Tumor suppressor gene Seq+ 34141 ChimerSeq STARFusion TCGA_RNA-Seq EFCAB2-FKBP3 EFCAB2 chr1 245222760 + FKBP3 chr14 45600003 - Exonic hg19 LUAD TCGA-44-8117-01A 3 2 In-Frame Inter-chr q44 q21.2 Seq+ 34142 ChimerSeq STARFusion TCGA_RNA-Seq GPBP1-GOLGA8B GPBP1 chr5 56543042 + GOLGA8B chr15 34839183 - Exonic hg19 LUAD TCGA-86-8669-01A 7 20 CDS-3'UTR Inter-chr q11.2 Transcription factor q14 Seq+ 34143 ChimerSeq STARFusion TCGA_RNA-Seq SFTPB-PIGR SFTPB chr2 85885732 - PIGR chr1 207102837 - Exonic hg19 LUAD TCGA-86-8669-01A 3 25 Out-of-frame Inter-chr p11.2 q32.1 34144 ChimerSeq STARFusion TCGA_RNA-Seq CRK-GEMIN4 CRK chr17 1340084 - GEMIN4 chr17 651272 - Exonic hg19 LUAD TCGA-86-8669-01A 2 26 In-Frame Intra-chr p13.3 p13.3 Seq+ 34145 ChimerSeq STARFusion TCGA_RNA-Seq GPBP1-GOLGA8A GPBP1 chr5 56543042 + GOLGA8A chr15 34692960 - Exonic hg19 LUAD TCGA-86-8669-01A 2 19 CDS-3'UTR Inter-chr q11.2 Transcription factor q14 Seq+ 34146 ChimerSeq STARFusion TCGA_RNA-Seq CLIP1-LOC100506801 CLIP1 chr12 122837269 - LOC100506801 chr1 21624641 + Exonic hg19 LUAD TCGA-55-A4DF-01A 10 30 Out-of-frame Inter-chr q24.31 34147 ChimerSeq STARFusion TCGA_RNA-Seq TAF2-ENPP2 TAF2 chr8 120768246 - ENPP2 chr8 120596289 - Exonic hg19 LUAD TCGA-55-A4DF-01A 3 6 Out-of-frame Intra-chr q24.12 q24.12 34148 ChimerSeq STARFusion TCGA_RNA-Seq ITGB4-TSPAN10 ITGB4 chr17 73747192 + TSPAN10 chr17 79612018 + Exonic hg19 LUAD TCGA-55-A4DF-01A 3 3 Out-of-frame Intra-chr q25.1 q25.3 Seq+ 34149 ChimerSeq STARFusion TCGA_RNA-Seq TYMP-PPP6R2 TYMP chr22 50968333 - PPP6R2 chr22 50810449 + Exonic hg19 LUAD TCGA-75-7031-01A 5 30 5'UTR-5'UTR Intra-chr q13.33 q13.33 Seq+ 34150 ChimerSeq STARFusion TCGA_RNA-Seq PRTG-PYGO1 PRTG chr15 56032580 - PYGO1 chr15 55841193 - Exonic hg19 LUAD TCGA-75-7031-01A 3 20 In-Frame Intra-chr q21.3 q21.3 Seq+ 34151 ChimerSeq STARFusion TCGA_RNA-Seq TEX9-CYFIP1 TEX9 chr15 56665702 + CYFIP1 chr15 22990057 + Exonic hg19 LUAD TCGA-75-7031-01A 2 11 In-Frame Intra-chr q21.3 q11.2 Seq+ 34152 ChimerSeq STARFusion TCGA_RNA-Seq TCF12-NIPA1 TCF12 chr15 57213296 + NIPA1 chr15 23062319 - Exonic hg19 LUAD TCGA-75-7031-01A 4 1 In-Frame Intra-chr q21.3 Oncogene Transcription factor q11.2 Seq+ 34153 ChimerSeq STARFusion TCGA_RNA-Seq ITGA3-MIEN1 ITGA3 chr17 48134009 + MIEN1 chr17 37886544 - Exonic hg19 LUAD TCGA-44-3396-01A 52 152 In-Frame Intra-chr q21.33 q12 Seq+ 34154 ChimerSeq STARFusion TCGA_RNA-Seq NME2-ACBD4 NME2 chr17 49244317 + ACBD4 chr17 43216388 + Exonic hg19 LUAD TCGA-44-3396-01A 6 29 In-Frame Intra-chr q21.33 Transcription factor q21.31 Seq+ 34155 ChimerSeq STARFusion TCGA_RNA-Seq LINC00673-BTBD17 LINC00673 chr17 70588342 - BTBD17 chr17 72356384 - Exonic hg19 LUAD TCGA-44-3396-01A 5 15 Out-of-frame Intra-chr q25.1 34156 ChimerSeq STARFusion TCGA_RNA-Seq RNF121-VWA5A RNF121 chr11 71640170 + VWA5A chr11 123988204 + Exonic hg19 LUAD TCGA-38-4632-01A 11 41 5'UTR-5'UTR Intra-chr q13.4 q24.2 Tumor suppressor gene Seq+ 34157 ChimerSeq STARFusion TCGA_RNA-Seq CBL-VWA5A CBL chr11 119077322 + VWA5A chr11 123988204 + Exonic hg19 LUAD TCGA-38-4632-01A 6 46 CDS-5'UTR Intra-chr q23.3 Oncogene Tumor suppressor gene q24.2 Tumor suppressor gene Seq+ 34158 ChimerSeq STARFusion TCGA_RNA-Seq SYTL2-DOK5 SYTL2 chr11 85521997 - DOK5 chr20 53226927 + Exonic hg19 LUAD TCGA-38-4632-01A 6 37 5'UTR-CDS Inter-chr q14.1 q13.2 Seq+ 34159 ChimerSeq STARFusion TCGA_RNA-Seq RNF121-VWA5A RNF121 chr11 71640170 + VWA5A chr11 123987273 + Exonic hg19 LUAD TCGA-38-4632-01A 2 41 5'UTR-5'UTR Intra-chr q13.4 q24.2 Tumor suppressor gene Seq+ 34160 ChimerSeq STARFusion TCGA_RNA-Seq SYTL2-DOK5 SYTL2 chr11 85521997 - DOK5 chr20 53259997 + Exonic hg19 LUAD TCGA-38-4632-01A 3 37 5'UTR-CDS Inter-chr q14.1 q13.2 Seq+ 34161 ChimerSeq STARFusion TCGA_RNA-Seq CADM1-ARCN1 CADM1 chr11 115374989 - ARCN1 chr11 118468422 + Exonic hg19 LUAD TCGA-38-4632-01A 5 17 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Seq+ 34162 ChimerSeq STARFusion TCGA_RNA-Seq NSMF-WDR85 NSMF chr9 140348843 - WDR85 chr9 140450100 - Exonic hg19 LUAD TCGA-38-4632-01A 5 9 Out-of-frame Intra-chr q34.3 34163 ChimerSeq STARFusion TCGA_RNA-Seq CHST8-KCNJ15 CHST8 chr19 34180297 + KCNJ15 chr21 39668848 + Exonic hg19 LUAD TCGA-38-4632-01A 2 9 CDS-5'UTR Inter-chr q13.11 q22.13 Seq+ 34164 ChimerSeq STARFusion TCGA_RNA-Seq NSMF-WDR85 NSMF chr9 140350863 - WDR85 chr9 140450100 - Exonic hg19 LUAD TCGA-38-4632-01A 2 9 Out-of-frame Intra-chr q34.3 34165 ChimerSeq STARFusion TCGA_RNA-Seq SORL1-SYTL2 SORL1 chr11 121466481 + SYTL2 chr11 85428573 - Exonic hg19 LUAD TCGA-38-4632-01A 3 5 In-Frame Intra-chr q24.1 q14.1 Seq+ 34166 ChimerSeq STARFusion TCGA_RNA-Seq DTD1-POU2F3 DTD1 chr20 18608877 + POU2F3 chr11 120186070 + Exonic hg19 LUAD TCGA-38-4632-01A 2 2 In-Frame Inter-chr p11.23 q23.3 Tumor suppressor gene Transcription factor Seq+ 34167 ChimerSeq STARFusion TCGA_RNA-Seq IFI6-STPG1 IFI6 chr1 27994737 - STPG1 chr1 24718169 - Exonic hg19 LUAD TCGA-55-8507-01A 16 79 Out-of-frame Intra-chr p35.3 p36.11 Seq+ 34168 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3B-LOC100507217 FNDC3B chr3 171778602 + LOC100507217 chr15 93429399 + Exonic hg19 LUAD TCGA-55-8507-01A 24 36 5'UTR-5'UTR Inter-chr q26.31 34169 ChimerSeq STARFusion TCGA_RNA-Seq RICTOR-DTNBP1 RICTOR chr5 39074213 - DTNBP1 chr6 15593312 - Exonic hg19 LUAD TCGA-55-8507-01A 7 38 Out-of-frame Inter-chr p13.1 p22.3 Seq+ 34170 ChimerSeq STARFusion TCGA_RNA-Seq RICTOR-DTNBP1 RICTOR chr5 39074213 - DTNBP1 chr6 15533626 - Exonic hg19 LUAD TCGA-55-8507-01A 5 38 In-Frame Inter-chr p13.1 p22.3 Seq+ 34171 ChimerSeq STARFusion TCGA_RNA-Seq PDGFRL-VPS37A PDGFRL chr8 17447274 + VPS37A chr8 17132242 + Exonic hg19 LUAD TCGA-91-A4BC-01A 4 35 In-Frame Intra-chr p22 Tumor suppressor gene p22 Seq+ 34172 ChimerSeq STARFusion TCGA_RNA-Seq VPS72-ROBO2 VPS72 chr1 151156793 - ROBO2 chr3 77617464 + Exonic hg19 LUAD TCGA-91-A4BC-01A 8 15 In-Frame Inter-chr q21.3 p12.3 Seq+ 34173 ChimerSeq STARFusion TCGA_RNA-Seq ASH1L-INSRR ASH1L chr1 155490891 - INSRR chr1 156824095 - Exonic hg19 LUAD TCGA-91-A4BC-01A 8 11 Out-of-frame Intra-chr q22 Transcription factor q23.1 Seq+ 34174 ChimerSeq STARFusion TCGA_RNA-Seq KCNK5-PDE4DIP KCNK5 chr6 39196702 - PDE4DIP chr1 144994701 - Exonic hg19 LUAD TCGA-91-A4BC-01A 4 18 In-Frame Inter-chr p21.2 q21.2 Oncogene Seq+ 34175 ChimerSeq STARFusion TCGA_RNA-Seq STK3-SPRR2E STK3 chr8 99761504 - SPRR2E chr1 153066246 - Exonic hg19 LUAD TCGA-91-A4BC-01A 2 10 CDS-5'UTR Inter-chr q22.2 q21.3 Seq+ 34176 ChimerSeq STARFusion TCGA_RNA-Seq FAM65A-LRRC36 FAM65A chr16 67562817 + LRRC36 chr16 67375860 + Exonic hg19 LUAD TCGA-91-A4BC-01A 2 4 5'UTR-CDS Intra-chr q22.1 Seq+ 34177 ChimerSeq STARFusion TCGA_RNA-Seq TRRAP-TMEM168 TRRAP chr7 98552927 + TMEM168 chr7 112425008 - Exonic hg19 LUAD TCGA-78-7154-01A 3 28 CDS-5'UTR Intra-chr q22.1 Atypical:PIKK Oncogene q31.1 Seq+ 34178 ChimerSeq STARFusion TCGA_RNA-Seq HIPK2-ADCK2 HIPK2 chr7 139477404 - ADCK2 chr7 140374411 + Exonic hg19 LUAD TCGA-78-7154-01A 3 15 Out-of-frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Atypical:ABC1 Seq+ 34179 ChimerSeq STARFusion TCGA_RNA-Seq SPATA6-BEND5 SPATA6 chr1 48771459 - BEND5 chr1 49193715 - Exonic hg19 LUAD TCGA-78-7154-01A 3 8 Out-of-frame Intra-chr p33 p33 Seq+ 34180 ChimerSeq STARFusion TCGA_RNA-Seq ZMYM5-IFT88 ZMYM5 chr13 20425495 - IFT88 chr13 21215429 + Exonic hg19 LUAD TCGA-78-7154-01A 2 12 In-Frame Intra-chr q12.11 q12.11 Tumor suppressor gene Seq+ 34181 ChimerSeq STARFusion TCGA_RNA-Seq TRIM24-KRIT1 TRIM24 chr7 138145657 + KRIT1 chr7 91855996 - Exonic hg19 LUAD TCGA-78-7154-01A 2 2 Out-of-frame Intra-chr q33 Oncogene Tumor suppressor gene q21.2 Tumor suppressor gene 34182 ChimerSeq STARFusion TCGA_RNA-Seq ATXN1-ARG1 ATXN1 chr6 16658007 - ARG1 chr6 131897803 + Exonic hg19 LUAD TCGA-55-6978-01A 3 59 5'UTR-CDS Intra-chr p22.3 q23.2 Tumor suppressor gene Seq+ 34183 ChimerSeq STARFusion TCGA_RNA-Seq ATXN1-ARG1 ATXN1 chr6 16658007 - ARG1 chr6 131900251 + Exonic hg19 LUAD TCGA-55-6978-01A 3 59 5'UTR-CDS Intra-chr p22.3 q23.2 Tumor suppressor gene Seq+ 34184 ChimerSeq STARFusion TCGA_RNA-Seq KHDRBS2-LMBRD1 KHDRBS2 chr6 62995763 - LMBRD1 chr6 70386433 - Exonic hg19 LUAD TCGA-55-6978-01A 4 9 In-Frame Intra-chr q11.1 q13 Seq+ 34185 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-APOL4 MKL1 chr22 41032482 - APOL4 chr22 36598101 - Exonic hg19 LUAD TCGA-55-6978-01A 4 9 5'UTR-5'UTR Intra-chr q13.2 q12.3 Seq+ 34186 ChimerSeq STARFusion TCGA_RNA-Seq KDM6A-DCAF7 KDM6A chrX 44733233 + DCAF7 chr17 61655831 + Exonic hg19 LUAD TCGA-71-6725-01A 5 22 In-Frame Inter-chr p11.3 Oncogene Tumor suppressor gene q23.3 Seq+ 34187 ChimerSeq STARFusion TCGA_RNA-Seq KDM6A-ZNF674 KDM6A chrX 44733233 + ZNF674 chrX 46360770 - Exonic hg19 LUAD TCGA-71-6725-01A 5 21 Out-of-frame Intra-chr p11.3 Oncogene Tumor suppressor gene p11.3 Transcription factor Seq+ 34188 ChimerSeq STARFusion TCGA_RNA-Seq KDM6A-ZNF674 KDM6A chrX 44733233 + ZNF674 chrX 46360767 - Exonic hg19 LUAD TCGA-71-6725-01A 2 21 Out-of-frame Intra-chr p11.3 Oncogene Tumor suppressor gene p11.3 Transcription factor Seq+ 34189 ChimerSeq STARFusion TCGA_RNA-Seq SPINT2-MAP4K1 SPINT2 chr19 38781215 + MAP4K1 chr19 39087777 - Exonic hg19 LUAD TCGA-55-A492-01A 48 190 In-Frame Intra-chr q13.2 Tumor suppressor gene Tumor suppressor gene Seq+ 34190 ChimerSeq STARFusion TCGA_RNA-Seq SPOP-GPATCH1 SPOP chr17 47755295 - GPATCH1 chr19 33609916 + Exonic hg19 LUAD TCGA-69-A59K-01A 12 62 5'UTR-CDS Inter-chr q21.33 Oncogene Tumor suppressor gene q13.11 Seq+ 34191 ChimerSeq STARFusion TCGA_RNA-Seq LINC00665-LSM14A LINC00665 chr19 36821155 - LSM14A chr19 34718270 + Exonic hg19 LUAD TCGA-69-A59K-01A 8 63 Out-of-frame Intra-chr q13.12 34192 ChimerSeq STARFusion TCGA_RNA-Seq SPOP-GPATCH1 SPOP chr17 47714121 - GPATCH1 chr19 33609916 + Exonic hg19 LUAD TCGA-69-A59K-01A 5 62 5'UTR-CDS Inter-chr q21.33 Oncogene Tumor suppressor gene q13.11 Seq+ 34193 ChimerSeq STARFusion TCGA_RNA-Seq SPOP-GPATCH1 SPOP chr17 47745389 - GPATCH1 chr19 33609916 + Exonic hg19 LUAD TCGA-69-A59K-01A 2 62 5'UTR-CDS Inter-chr q21.33 Oncogene Tumor suppressor gene q13.11 Seq+ 34194 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6A-ANKS4B TNRC6A chr16 24802355 + ANKS4B chr16 21262929 + Exonic hg19 LUAD TCGA-69-A59K-01A 3 39 Out-of-frame Intra-chr p12.1 Seq+ 34195 ChimerSeq STARFusion TCGA_RNA-Seq NFKBID-ZNF585B NFKBID chr19 36389374 - ZNF585B chr19 37698156 - Exonic hg19 LUAD TCGA-69-A59K-01A 5 29 5'UTR-5'UTR Intra-chr q13.12 q13.12 Transcription factor Seq+ 34196 ChimerSeq STARFusion TCGA_RNA-Seq PEPD-SKAP1 PEPD chr19 33953901 - SKAP1 chr17 46214699 - Exonic hg19 LUAD TCGA-69-A59K-01A 3 30 Out-of-frame Inter-chr q13.11 q21.32 Seq+ 34197 ChimerSeq STARFusion TCGA_RNA-Seq ZNF720-POLN ZNF720 chr16 31765221 + POLN chr4 2133017 - Exonic hg19 LUAD TCGA-69-A59K-01A 2 14 Out-of-frame Inter-chr p11.2 p16.3 Seq+ 34198 ChimerSeq STARFusion TCGA_RNA-Seq TLCD1-NEK8 TLCD1 chr17 27052922 - NEK8 chr17 27061001 + Exonic hg19 LUAD TCGA-69-A59K-01A 3 8 In-Frame Intra-chr q11.2 q11.2 Other:NEK Seq+ 34199 ChimerSeq STARFusion TCGA_RNA-Seq AKAP6-SPTSSA AKAP6 chr14 32903023 + SPTSSA chr14 34904510 - Exonic hg19 LUAD TCGA-69-A59K-01A 2 4 Out-of-frame Intra-chr q12 q13.1 Seq+ 34200 ChimerSeq STARFusion TCGA_RNA-Seq NCOA3-SGK2 NCOA3 chr20 46212005 + SGK2 chr20 42195113 + Exonic hg19 LUAD TCGA-75-5146-01A 15 70 5'UTR-5'UTR Intra-chr q13.12 Transcription factor q13.12 AGC:SGK Seq+ 34201 ChimerSeq STARFusion TCGA_RNA-Seq LOC100133286-CBR3 LOC100133286 chr21 37442572 - CBR3 chr21 37507699 + Exonic hg19 LUAD TCGA-78-7633-01A 6 7 Out-of-frame Intra-chr q22.12 34202 ChimerSeq STARFusion TCGA_RNA-Seq POLB-UVRAG POLB chr8 42202537 + UVRAG chr11 75719851 + Exonic hg19 LUAD TCGA-95-8039-01A 7 29 In-Frame Inter-chr p11.21 q13.5 Tumor suppressor gene Seq+ 34203 ChimerSeq STARFusion TCGA_RNA-Seq RPS20-TMEM70 RPS20 chr8 56986628 - TMEM70 chr8 74894454 + Exonic hg19 LUAD TCGA-95-8039-01A 4 9 Out-of-frame Intra-chr q12.1 q21.11 34204 ChimerSeq STARFusion TCGA_RNA-Seq FTO-RBL2 FTO chr16 53738141 + RBL2 chr16 53472928 + Exonic hg19 LUAD TCGA-95-8039-01A 2 9 In-Frame Intra-chr q12.2 q12.2 Tumor suppressor gene Seq+ 34205 ChimerSeq STARFusion TCGA_RNA-Seq CAPNS1-SFTPD CAPNS1 chr19 36641056 + SFTPD chr10 81706237 - Exonic hg19 LUAD TCGA-86-8280-01A 3 2 Out-of-frame Inter-chr q13.12 q22.3 34206 ChimerSeq STARFusion TCGA_RNA-Seq HSPA13-LOC100507412 HSPA13 chr21 15750520 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LUAD TCGA-86-8280-01A 2 4 CDS-5'UTR Inter-chr q11.2 34207 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF3-ANO10 ARHGEF3 chr3 56807737 - ANO10 chr3 43474219 - Exonic hg19 LUAD TCGA-35-4123-01A 13 66 In-Frame Intra-chr p14.3 p21.33 Seq+ 34208 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 LUAD TCGA-64-1679-01A 4 11 3'UTR-5'UTR Intra-chr q34 34209 ChimerSeq STARFusion TCGA_RNA-Seq UPF2-NUDT5 UPF2 chr10 12084754 - NUDT5 chr10 12214865 - Exonic hg19 LUAD TCGA-64-1679-01A 3 5 5'UTR-CDS Intra-chr p14 p14 Seq+ 34210 ChimerSeq STARFusion TCGA_RNA-Seq SLC2A1-ELOVL1 SLC2A1 chr1 43424305 - ELOVL1 chr1 43830465 - Exonic hg19 LUAD TCGA-64-1679-01A 2 7 In-Frame Intra-chr p34.2 p34.2 Seq+ 34211 ChimerSeq STARFusion TCGA_RNA-Seq PTRH2-VMP1 PTRH2 chr17 57784732 - VMP1 chr17 57842332 + Exonic hg19 LUAD TCGA-64-1679-01A 2 1 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 34212 ChimerSeq STARFusion TCGA_RNA-Seq HERC2-OTUD7A HERC2 chr15 28544548 - OTUD7A chr15 31796021 - Exonic hg19 LUAD TCGA-64-1679-01A 2 0 Out-of-frame Intra-chr q13.3 34213 ChimerSeq STARFusion TCGA_RNA-Seq ROS1-CLTC ROS1 chr6 117609849 - CLTC chr17 57771089 + Exonic hg19 LUAD TCGA-44-2665-01A 11 111 Out-of-frame Inter-chr q22.1 Oncogene q23.1 Seq+ 34214 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-ROS1 CLTC chr17 57768072 + ROS1 chr6 117642557 - Exonic hg19 LUAD TCGA-44-2665-01A 11 110 In-Frame Inter-chr q23.1 q22.1 Oncogene Seq+ 34215 ChimerSeq STARFusion TCGA_RNA-Seq E2F5-CA3 E2F5 chr8 86124439 + CA3 chr8 86351941 + Exonic hg19 LUAD TCGA-55-6975-01A 5 13 In-Frame Intra-chr q21.2 Transcription factor q21.2 Seq+ 34216 ChimerSeq STARFusion TCGA_RNA-Seq CTNNA1-SLC38A9 CTNNA1 chr5 138089199 + SLC38A9 chr5 54993820 - Exonic hg19 LUAD TCGA-55-6975-01A 2 15 5'UTR-5'UTR Intra-chr q31.2 Oncogene q11.2 Seq+ 34217 ChimerSeq STARFusion TCGA_RNA-Seq ANAPC15-RAI14 ANAPC15 chr11 71821134 - RAI14 chr5 34757573 + Exonic hg19 LUAD TCGA-55-6975-01A 2 4 Out-of-frame Inter-chr q13.4 p13.2 Seq+ 34218 ChimerSeq STARFusion TCGA_RNA-Seq SMURF2-LRRC37A3 SMURF2 chr17 62657947 - LRRC37A3 chr17 62852007 - Exonic hg19 LUAD TCGA-78-8662-01A 21 16 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 34219 ChimerSeq STARFusion TCGA_RNA-Seq TLE1-LOC100507412 TLE1 chr9 84225135 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LUAD TCGA-78-8662-01A 3 11 CDS-5'UTR Inter-chr q21.32 34220 ChimerSeq STARFusion TCGA_RNA-Seq CHST3-CDH23 CHST3 chr10 73724452 + CDH23 chr10 73571072 + Exonic hg19 LUAD TCGA-78-8662-01A 2 6 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 34221 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-MYO1C YWHAE chr17 1303341 - MYO1C chr17 1375522 - Exonic hg19 LUAD TCGA-78-8662-01A 2 3 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 34222 ChimerSeq STARFusion TCGA_RNA-Seq KDM5A-RAE1 KDM5A chr12 459787 - RAE1 chr20 55940412 + Exonic hg19 LUAD TCGA-44-A47B-01A 28 65 In-Frame Inter-chr p13.33 Tumor suppressor gene q13.31 Seq+ 34223 ChimerSeq STARFusion TCGA_RNA-Seq WSB1-FN3KRP WSB1 chr17 25621461 + FN3KRP chr17 80676782 + Exonic hg19 LUAD TCGA-44-A47B-01A 13 43 Out-of-frame Intra-chr q11.1 q25.3 Seq+ 34224 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF4-EYA2 TM9SF4 chr20 30747914 + EYA2 chr20 45618640 + Exonic hg19 LUAD TCGA-44-A47B-01A 3 21 CDS-5'UTR Intra-chr q11.21 q13.12 Seq+ 34225 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF4-EYA2 TM9SF4 chr20 30746317 + EYA2 chr20 45618640 + Exonic hg19 LUAD TCGA-44-A47B-01A 3 21 CDS-5'UTR Intra-chr q11.21 q13.12 Seq+ 34226 ChimerSeq STARFusion TCGA_RNA-Seq HEBP1-ZBTB46 HEBP1 chr12 13140086 - ZBTB46 chr20 62378654 - Exonic hg19 LUAD TCGA-44-A47B-01A 4 8 Out-of-frame Inter-chr p13.1 q13.33 Transcription factor Seq+ 34227 ChimerSeq STARFusion TCGA_RNA-Seq ALYREF-DUSP14 ALYREF chr17 79848565 - DUSP14 chr17 35870779 + Exonic hg19 LUAD TCGA-44-A47B-01A 2 1 CDS-5'UTR Intra-chr q25.3 q12 34228 ChimerSeq STARFusion TCGA_RNA-Seq FUT8-CSPG5 FUT8 chr14 65922436 + CSPG5 chr3 47604251 - Exonic hg19 LUAD TCGA-44-A47B-01A 2 0 5'UTR-CDS Inter-chr q23.3 p21.31 34229 ChimerSeq STARFusion TCGA_RNA-Seq C11orf80-RBM14 C11orf80 chr11 66595835 + RBM14 chr11 66391685 + Exonic hg19 LUAD TCGA-73-7499-01A 4 7 Out-of-frame Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 34230 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-SNF8 RNA45S5 chrUn_gl000220 116454 + SNF8 chr17 47018358 - Exonic hg19 LUAD TCGA-73-7499-01A 3 1 Out-of-frame Inter-chr q21.32 34231 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD40-LRRC6 ANKRD40 chr17 48774301 - LRRC6 chr8 133622507 - Exonic hg19 LUAD TCGA-L9-A443-01A 26 39 In-Frame Inter-chr q21.33 q24.22 Seq+ 34232 ChimerSeq STARFusion TCGA_RNA-Seq HTATSF1-BRS3 HTATSF1 chrX 135586622 + BRS3 chrX 135572292 + Exonic hg19 LUAD TCGA-L9-A443-01A 5 21 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 34233 ChimerSeq STARFusion TCGA_RNA-Seq FGF13-DACH2 FGF13 chrX 138286221 - DACH2 chrX 86067859 + Exonic hg19 LUAD TCGA-67-3773-01A 3 13 In-Frame Intra-chr q27.1 q21.2 Transcription factor Seq+ 34234 ChimerSeq STARFusion TCGA_RNA-Seq MACROD1-PLA2G16 MACROD1 chr11 63918711 - PLA2G16 chr11 63381540 - Exonic hg19 LUAD TCGA-53-A4EZ-01A 19 34 CDS-5'UTR Intra-chr q13.1 q13.1 Tumor suppressor gene Seq+ 34235 ChimerSeq STARFusion TCGA_RNA-Seq NUMA1-TRPT1 NUMA1 chr11 71715686 - TRPT1 chr11 63993341 - Exonic hg19 LUAD TCGA-53-A4EZ-01A 8 69 CDS-5'UTR Intra-chr q13.4 Oncogene q13.1 Seq+ 34236 ChimerSeq STARFusion TCGA_RNA-Seq SF1-SYT7 SF1 chr11 64545834 - SYT7 chr11 61300596 - Exonic hg19 LUAD TCGA-53-A4EZ-01A 7 64 Out-of-frame Intra-chr q13.1 q12.2 Seq+ 34237 ChimerSeq STARFusion TCGA_RNA-Seq PRKRIR-POLD4 PRKRIR chr11 76091792 - POLD4 chr11 67120548 - Exonic hg19 LUAD TCGA-53-A4EZ-01A 5 19 Out-of-frame Intra-chr q13.2 Seq+ 34238 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC4-NUDT22 DNAJC4 chr11 64001452 + NUDT22 chr11 63996719 + Exonic hg19 LUAD TCGA-53-A4EZ-01A 5 18 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 34239 ChimerSeq STARFusion TCGA_RNA-Seq CMC2-PZP CMC2 chr16 81040339 - PZP chr12 9312621 - Exonic hg19 LUAD TCGA-53-A4EZ-01A 2 18 5'UTR-CDS Inter-chr q23.2 p13.31 Seq+ 34240 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC4-NUDT22 DNAJC4 chr11 64001452 + NUDT22 chr11 63996950 + Exonic hg19 LUAD TCGA-53-A4EZ-01A 2 18 In-Frame Intra-chr q13.1 q13.1 Seq+ 34241 ChimerSeq STARFusion TCGA_RNA-Seq ADAM9-RNF170 ADAM9 chr8 38854679 + RNF170 chr8 42743014 - Exonic hg19 LUAD TCGA-50-5933-01A 6 25 5'UTR-5'UTR Intra-chr p11.21 Seq+ 34242 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57697534 + VMP1 chr17 57915656 + Exonic hg19 LUAD TCGA-50-5933-01A 2 15 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 34243 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 LUAD TCGA-73-4659-01A 4 4 3'UTR-5'UTR Intra-chr q34 34244 ChimerSeq STARFusion TCGA_RNA-Seq XPO7-ETV4 XPO7 chr8 21837714 + ETV4 chr17 41613847 - Exonic hg19 LUAD TCGA-73-4659-01A 2 7 Out-of-frame Inter-chr p21.3 q21.31 Oncogene Transcription factor Seq+ 34245 ChimerSeq STARFusion TCGA_RNA-Seq BPIFA1-CPEB2 BPIFA1 chr20 31827716 + CPEB2 chr4 15005439 + Exonic hg19 LUAD TCGA-73-4659-01A 3 1 Out-of-frame Inter-chr q11.21 34246 ChimerSeq STARFusion TCGA_RNA-Seq LOC100133286-CBR3 LOC100133286 chr21 37442567 - CBR3 chr21 37507704 + Exonic hg19 LUAD TCGA-73-4659-01A 3 1 Out-of-frame Intra-chr q22.12 34247 ChimerSeq STARFusion TCGA_RNA-Seq BICC1-DPYSL4 BICC1 chr10 60461903 + DPYSL4 chr10 134013860 + Exonic hg19 LUAD TCGA-97-7553-01A 3 10 In-Frame Intra-chr q21.1 q26.3 Seq+ 34248 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-SFTPA2 TMPRSS2 chr21 42836636 - SFTPA2 chr10 81316245 - Exonic hg19 LUAD TCGA-97-7553-01A 3 1 Out-of-frame Inter-chr q22.3 q22.3 34249 ChimerSeq STARFusion TCGA_RNA-Seq NPEPPS-KPNB1 NPEPPS chr17 45608921 + KPNB1 chr17 45740455 + Exonic hg19 LUAD TCGA-78-8648-01A 2 3 In-Frame Intra-chr q21.32 q21.32 Seq+ 34250 ChimerSeq STARFusion TCGA_RNA-Seq RERE-ENO1 RERE chr1 8525985 - ENO1 chr1 8934976 - Exonic hg19 LUAD TCGA-55-A48Y 17 45 CDS-5'UTR Intra-chr p36.23 p36.23 Seq+ 34251 ChimerSeq STARFusion TCGA_RNA-Seq ATAD1-RNLS ATAD1 chr10 89574195 - RNLS chr10 90122482 - Exonic hg19 LUAD TCGA-55-A48Y 13 41 Out-of-frame Intra-chr q23.31 Seq+ 34252 ChimerSeq STARFusion TCGA_RNA-Seq SETD2-QRICH1 SETD2 chr3 47205344 - QRICH1 chr3 49070661 - Exonic hg19 LUAD TCGA-55-A48Y 13 34 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Seq+ 34253 ChimerSeq STARFusion TCGA_RNA-Seq PPAP2A-ANKRD55 PPAP2A chr5 54737679 - ANKRD55 chr5 55422933 - Exonic hg19 LUAD TCGA-55-A48Y 12 24 In-Frame Intra-chr q11.2 Seq+ 34254 ChimerSeq STARFusion TCGA_RNA-Seq PTGR1-C9orf84 PTGR1 chr9 114355206 - C9orf84 chr9 114456642 - Exonic hg19 LUAD TCGA-55-A48Y 7 40 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 34255 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC7-C16orf74 ZDHHC7 chr16 85010701 - C16orf74 chr16 85743891 - Exonic hg19 LUAD TCGA-55-A48Y 7 37 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 34256 ChimerSeq STARFusion TCGA_RNA-Seq WWP2-CYB5B WWP2 chr16 69833198 + CYB5B chr16 69481053 + Exonic hg19 LUAD TCGA-55-A48Y 5 16 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 34257 ChimerSeq STARFusion TCGA_RNA-Seq PTBP3-C9orf147 PTBP3 chr9 114993660 - C9orf147 chr9 115196255 - Exonic hg19 LUAD TCGA-55-A48Y 3 19 Out-of-frame Intra-chr q32 q32 34258 ChimerSeq STARFusion TCGA_RNA-Seq EPAS1-IGL@ EPAS1 chr2 46606899 + IGL@ chr22 23241797 + Exonic hg19 LUAD TCGA-55-A48Y 7 2 Out-of-frame Inter-chr p21 Tumor suppressor gene Transcription factor q11.22 34259 ChimerSeq STARFusion TCGA_RNA-Seq EPAS1-IGLC2 EPAS1 chr2 46606899 + IGLC2 chr22 23241797 + Exonic hg19 LUAD TCGA-55-A48Y 7 2 Out-of-frame Inter-chr p21 Tumor suppressor gene Transcription factor q11.22 34260 ChimerSeq STARFusion TCGA_RNA-Seq UNK-KIAA0195 UNK chr17 73781065 + KIAA0195 chr17 73467881 + Exonic hg19 LUAD TCGA-55-A48Y 2 18 5'UTR-5'UTR Intra-chr q25.1 Seq+ 34261 ChimerSeq STARFusion TCGA_RNA-Seq CDK10-SPG7 CDK10 chr16 89753167 + SPG7 chr16 89611056 + Exonic hg19 LUAD TCGA-55-A48Y 2 16 5'UTR-CDS Intra-chr q24.3 CMGC:CDK q24.3 Seq+ 34262 ChimerSeq STARFusion TCGA_RNA-Seq SLC16A3-AKAP10 SLC16A3 chr17 80186982 + AKAP10 chr17 19827830 - Exonic hg19 LUAD TCGA-55-A48Y 3 8 5'UTR-CDS Intra-chr q25.3 p11.2 Seq+ 34263 ChimerSeq STARFusion TCGA_RNA-Seq AEBP2-PLEKHA5 AEBP2 chr12 19626289 + PLEKHA5 chr12 19410367 + Exonic hg19 LUAD TCGA-55-A48Y 2 9 In-Frame Intra-chr p12.3 Transcription factor p12.3 Seq+ 34264 ChimerSeq STARFusion TCGA_RNA-Seq ENTPD5-ALDH6A1 ENTPD5 chr14 74436713 - ALDH6A1 chr14 74541720 - Exonic hg19 LUAD TCGA-55-A48Y 2 7 In-Frame Intra-chr q24.3 q24.3 Seq+ 34265 ChimerSeq STARFusion TCGA_RNA-Seq ETHE1-ZNF235 ETHE1 chr19 44030353 - ZNF235 chr19 44740882 - Exonic hg19 LUAD TCGA-55-A48Y 2 4 CDS-3'UTR Intra-chr q13.31 q13.31 Transcription factor Seq+ 34266 ChimerSeq STARFusion TCGA_RNA-Seq CTNND2-GPI CTNND2 chr5 11159688 - GPI chr19 34884819 + Exonic hg19 LUAD TCGA-55-7910-01A 2 6 Out-of-frame Inter-chr p15.2 Seq+ 34267 ChimerSeq STARFusion TCGA_RNA-Seq CUL2-PARD3 CUL2 chr10 35333494 - PARD3 chr10 34806087 - Exonic hg19 LUAD TCGA-55-6642-01A 2 27 In-Frame Intra-chr p11.21 Tumor suppressor gene p11.21 Seq+ 34268 ChimerSeq STARFusion TCGA_RNA-Seq FUT10-NDUFV2 FUT10 chr8 33318890 - NDUFV2 chr18 9117836 + Exonic hg19 LUAD TCGA-55-6642-01A 2 3 In-Frame Inter-chr p12 p11.22 Seq+ 34269 ChimerSeq STARFusion TCGA_RNA-Seq ILVBL-SLC1A6 ILVBL chr19 15233504 - SLC1A6 chr19 15061202 - Exonic hg19 LUAD TCGA-78-7143-01A 27 67 In-Frame Intra-chr p13.12 p13.12 Seq+ 34270 ChimerSeq STARFusion TCGA_RNA-Seq ZNF417-BAX ZNF417 chr19 58423428 - BAX chr19 49464067 + Exonic hg19 LUAD TCGA-50-6591-01A 64 134 Out-of-frame Intra-chr q13.43 Transcription factor q13.33 Tumor suppressor gene Seq+ 34271 ChimerSeq STARFusion TCGA_RNA-Seq ZNF587-BAX ZNF587 chr19 58367601 + BAX chr19 49464067 + Exonic hg19 LUAD TCGA-50-6591-01A 27 140 Out-of-frame Intra-chr q13.43 Transcription factor q13.33 Tumor suppressor gene Seq+ 34272 ChimerSeq STARFusion TCGA_RNA-Seq GLI3-HIBADH GLI3 chr7 42187825 - HIBADH chr7 27672064 - Exonic hg19 LUAD TCGA-50-6591-01A 4 38 Out-of-frame Intra-chr p14.1 Transcription factor p15.2 Seq+ 34273 ChimerSeq STARFusion TCGA_RNA-Seq GLI3-HIBADH GLI3 chr7 42187825 - HIBADH chr7 27672045 - Exonic hg19 LUAD TCGA-50-6591-01A 3 38 Out-of-frame Intra-chr p14.1 Transcription factor p15.2 Seq+ 34274 ChimerSeq STARFusion TCGA_RNA-Seq SMARCA4-LINC00598 SMARCA4 chr19 11152236 + LINC00598 chr13 41040814 - Exonic hg19 LUAD TCGA-50-6591-01A 2 23 Out-of-frame Inter-chr p13.2 Oncogene Tumor suppressor gene q14.11 34275 ChimerSeq STARFusion TCGA_RNA-Seq PDS5B-CD3EAP PDS5B chr13 33160730 + CD3EAP chr19 45910352 + Exonic hg19 LUAD TCGA-50-6591-01A 2 17 5'UTR-CDS Inter-chr q13.1 Tumor suppressor gene q13.32 Seq+ 34276 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-AFG3L1P ANKRD11 chr16 89556653 - AFG3L1P chr16 90044047 + Exonic hg19 LUAD TCGA-50-6591-01A 3 9 5'UTR-5'UTR Intra-chr q24.3 q24.3 34277 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-AFG3L1P ANKRD11 chr16 89556653 - AFG3L1P chr16 90044086 + Exonic hg19 LUAD TCGA-50-6591-01A 2 9 5'UTR-5'UTR Intra-chr q24.3 q24.3 34278 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-RPS16 ACTN4 chr19 39138547 + RPS16 chr19 39926348 - Exonic hg19 LUAD TCGA-44-2662-01A 13 322 CDS-3'UTR Intra-chr q13.2 Seq+ 34279 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-RPS16 ACTN4 chr19 39138547 + RPS16 chr19 39924401 - Exonic hg19 LUAD TCGA-44-2662-01A 5 322 CDS-3'UTR Intra-chr q13.2 Seq+ 34280 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS16-TERT ADAMTS16 chr5 5191903 + TERT chr5 1282739 - Exonic hg19 LUAD TCGA-44-2662-01A 5 10 Out-of-frame Intra-chr p15.32 p15.33 Oncogene Seq+ 34281 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-ANGPT1 PTK2 chr8 142011224 - ANGPT1 chr8 108509734 - Exonic hg19 LUAD TCGA-MP-A4SV-01A 11 29 5'UTR-5'UTR Intra-chr q24.3 q23.1 Seq+ 34282 ChimerSeq STARFusion TCGA_RNA-Seq CBFA2T2-DOK5 CBFA2T2 chr20 32078107 + DOK5 chr20 53259997 + Exonic hg19 LUAD TCGA-MP-A4SV-01A 8 8 Out-of-frame Intra-chr q11.21 q13.2 Seq+ 34283 ChimerSeq STARFusion TCGA_RNA-Seq HEBP1-CREBL2 HEBP1 chr12 13152971 - CREBL2 chr12 12788711 + Exonic hg19 LUAD TCGA-MP-A4SV-01A 3 7 In-Frame Intra-chr p13.1 p13.1 Transcription factor Seq+ 34284 ChimerSeq STARFusion TCGA_RNA-Seq KREMEN1-ENTHD1 KREMEN1 chr22 29494941 + ENTHD1 chr22 40231963 - Exonic hg19 LUAD TCGA-MP-A4SV-01A 2 5 In-Frame Intra-chr q12.1 q13.1 Seq+ 34285 ChimerSeq STARFusion TCGA_RNA-Seq LAMA3-ZNF521 LAMA3 chr18 21529888 + ZNF521 chr18 22807661 - Exonic hg19 LUAD TCGA-75-6214-01A 82 270 In-Frame Intra-chr q11.2 q11.2 Oncogene Transcription factor Seq+ 34286 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57763169 + VMP1 chr17 57886157 + Exonic hg19 LUAD TCGA-75-6214-01A 69 135 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 34287 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT5-TOX2 B4GALT5 chr20 48330113 - TOX2 chr20 42602007 + Exonic hg19 LUAD TCGA-75-6214-01A 16 14 Out-of-frame Intra-chr q13.13 q13.12 Seq+ 34288 ChimerSeq STARFusion TCGA_RNA-Seq FRAS1-ANXA3 FRAS1 chr4 78987170 + ANXA3 chr4 79494334 + Exonic hg19 LUAD TCGA-75-6214-01A 7 8 In-Frame Intra-chr q21.21 q21.21 34289 ChimerSeq STARFusion TCGA_RNA-Seq STX5-WDR74 STX5 chr11 62598491 - WDR74 chr11 62607131 - Exonic hg19 LUAD TCGA-75-6214-01A 3 12 CDS-5'UTR Intra-chr q12.3 q12.3 Seq+ 34290 ChimerSeq STARFusion TCGA_RNA-Seq MGST1-SLCO1A2 MGST1 chr12 16500644 + SLCO1A2 chr12 21487638 - Exonic hg19 LUAD TCGA-50-5935-01A 3 3 5'UTR-5'UTR Intra-chr p12.3 p12.1 Seq+ 34291 ChimerSeq STARFusion TCGA_RNA-Seq MGST1-SLCO1A2 MGST1 chr12 16500644 + SLCO1A2 chr12 21487643 - Exonic hg19 LUAD TCGA-50-5935-01A 3 3 5'UTR-5'UTR Intra-chr p12.3 p12.1 Seq+ 34292 ChimerSeq STARFusion TCGA_RNA-Seq ZNF136-NUDT19 ZNF136 chr19 12274021 + NUDT19 chr19 33200091 + Exonic hg19 LUAD TCGA-50-5935-01A 3 3 In-Frame Intra-chr p13.2 Transcription factor q13.11 34293 ChimerSeq STARFusion TCGA_RNA-Seq SOX5-SFTA3 SOX5 chr12 24715267 - SFTA3 chr14 36960496 - Exonic hg19 LUAD TCGA-50-5935-01A 2 3 5'UTR-CDS Inter-chr p12.1 Transcription factor q13.3 34294 ChimerSeq STARFusion TCGA_RNA-Seq YY1AP1-GON4L YY1AP1 chr1 155631098 - GON4L chr1 155743001 - Exonic hg19 LUAD TCGA-44-3918-01A 2 57 Out-of-frame Intra-chr q22 q22 34295 ChimerSeq STARFusion TCGA_RNA-Seq SNORA50-CNOT1 SNORA50 chr16 58593708 - CNOT1 chr16 58594266 - Exonic hg19 LUAD TCGA-44-3918-01A 5 18 3'UTR-CDS Intra-chr q23.3 q21 34296 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 LUAD TCGA-44-3918-01A 3 2 3'UTR-5'UTR Intra-chr q34 34297 ChimerSeq STARFusion TCGA_RNA-Seq HAT1-DYNC1I2 HAT1 chr2 172803303 + DYNC1I2 chr2 172571838 + Exonic hg19 LUAD TCGA-44-3918-01A 2 5 In-Frame Intra-chr q31.1 q31.1 34298 ChimerSeq STARFusion TCGA_RNA-Seq ACAP3-TMEM240 ACAP3 chr1 1227799 - TMEM240 chr1 1475167 - Exonic hg19 LUAD TCGA-99-8033-01A 9 28 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 34299 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-STK11 TNRC6B chr22 40697337 + STK11 chr19 1222984 + Exonic hg19 LUAD TCGA-99-8033-01A 4 14 Out-of-frame Inter-chr q13.1 p13.3 Oncogene Tumor suppressor gene Seq+ 34300 ChimerSeq STARFusion TCGA_RNA-Seq MVK-SEC1P MVK chr12 110012705 + SEC1P chr19 49183282 + Exonic hg19 LUAD TCGA-99-8033-01A 3 15 Out-of-frame Inter-chr q24.11 q13.33 Seq+ 34301 ChimerSeq STARFusion TCGA_RNA-Seq SSR1-FARS2 SSR1 chr6 7303783 - FARS2 chr6 5545413 + Exonic hg19 LUAD TCGA-62-A46S-01A 110 635 In-Frame Intra-chr p24.3 p25.1 Seq+ 34302 ChimerSeq STARFusion TCGA_RNA-Seq TMEM64-HHLA1 TMEM64 chr8 91657339 - HHLA1 chr8 133078215 - Exonic hg19 LUAD TCGA-62-A46S-01A 15 18 Out-of-frame Intra-chr q21.3 q24.22 Seq+ 34303 ChimerSeq STARFusion TCGA_RNA-Seq NUMA1-DHCR7 NUMA1 chr11 71717081 - DHCR7 chr11 71150129 - Exonic hg19 LUAD TCGA-62-A46S-01A 12 27 Out-of-frame Intra-chr q13.4 Oncogene q13.4 Seq+ 34304 ChimerSeq STARFusion TCGA_RNA-Seq TMEM64-OC90 TMEM64 chr8 91657339 - OC90 chr8 133058130 - Exonic hg19 LUAD TCGA-62-A46S-01A 2 30 Out-of-frame Intra-chr q21.3 q24.22 Seq+ 34305 ChimerSeq STARFusion TCGA_RNA-Seq TMEM64-HHLA1 TMEM64 chr8 91657339 - HHLA1 chr8 133076285 - Exonic hg19 LUAD TCGA-62-A46S-01A 2 18 Out-of-frame Intra-chr q21.3 q24.22 Seq+ 34306 ChimerSeq STARFusion TCGA_RNA-Seq CDKN3-SFTA3 CDKN3 chr14 54868297 + SFTA3 chr14 36960496 - Exonic hg19 LUAD TCGA-86-A4D0-01A 22 74 Out-of-frame Intra-chr q22.2 q13.3 Seq+ 34307 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD1-KIAA1875 PCMTD1 chr8 52811490 - KIAA1875 chr8 145170846 + Exonic hg19 LUAD TCGA-86-A4D0-01A 5 28 5'UTR-5'UTR Intra-chr q11.23 Seq+ 34308 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB8OS-YARS ZBTB8OS chr1 33116034 - YARS chr1 33241692 - Exonic hg19 LUAD TCGA-86-A4D0-01A 2 26 Out-of-frame Intra-chr p35.1 p35.1 Seq+ 34309 ChimerSeq STARFusion TCGA_RNA-Seq LCN2-SUV420H1 LCN2 chr9 130914563 + SUV420H1 chr11 67934645 - Exonic hg19 LUAD TCGA-86-A4D0-01A 3 17 Out-of-frame Inter-chr q34.11 34310 ChimerSeq STARFusion TCGA_RNA-Seq SRRM2-IGH@ SRRM2 chr16 2809916 + IGH@ chr14 106330069 - Exonic hg19 LUAD TCGA-55-7816 18 3 Out-of-frame Inter-chr p13.3 32.33 34311 ChimerSeq STARFusion TCGA_RNA-Seq SRRM2-IGH@ SRRM2 chr16 2809916 + IGH@ chr14 106330470 - Exonic hg19 LUAD TCGA-55-7816 13 2 Out-of-frame Inter-chr p13.3 32.33 34312 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC1-MAP4 SMARCC1 chr3 47702784 - MAP4 chr3 47919013 - Exonic hg19 LUAD TCGA-55-8085-01A 29 79 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 34313 ChimerSeq STARFusion TCGA_RNA-Seq CHP1-RAD51 CHP1 chr15 41562816 + RAD51 chr15 41011003 + Exonic hg19 LUAD TCGA-55-8085-01A 10 28 Out-of-frame Intra-chr q15.1 q15.1 Seq+ 34314 ChimerSeq STARFusion TCGA_RNA-Seq PBRM1-TMEM110 PBRM1 chr3 52584437 - TMEM110 chr3 52889460 - Exonic hg19 LUAD TCGA-55-8085-01A 7 21 In-Frame Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 Seq+ 34315 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KA1-LIN28A RPS6KA1 chr1 26885428 + LIN28A chr1 26751794 + Exonic hg19 LUAD TCGA-55-8085-01A 7 21 In-Frame Intra-chr p36.11 Transcription factor Seq+ 34316 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-NUP107 MDM2 chr12 69233581 + NUP107 chr12 69135593 + Exonic hg19 LUAD TCGA-55-8085-01A 6 9 In-Frame Intra-chr q15 Oncogene q15 Seq+ 34317 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-NUP107 MDM2 chr12 69229764 + NUP107 chr12 69135593 + Exonic hg19 LUAD TCGA-55-8085-01A 4 9 In-Frame Intra-chr q15 Oncogene q15 Seq+ 34318 ChimerSeq STARFusion TCGA_RNA-Seq TFCP2L1-CLASP1 TFCP2L1 chr2 122004394 - CLASP1 chr2 122218769 - Exonic hg19 LUAD TCGA-55-8085-01A 3 13 In-Frame Intra-chr q14.2 Transcription factor q14.3 Seq+ 34319 ChimerSeq STARFusion TCGA_RNA-Seq ZNF414-MYO1F ZNF414 chr19 8575735 - MYO1F chr19 8587713 - Exonic hg19 LUAD TCGA-55-8085-01A 2 4 In-Frame Intra-chr p13.2 Transcription factor p13.2 Seq+ 34320 ChimerSeq STARFusion TCGA_RNA-Seq ITGB4-RNF157 ITGB4 chr17 73733725 + RNF157 chr17 74208563 - Exonic hg19 LUAD TCGA-55-8085-01A 2 1 Out-of-frame Intra-chr q25.1 q25.1 34321 ChimerSeq STARFusion TCGA_RNA-Seq NEBL-LOC100132891 NEBL chr10 21309046 - LOC100132891 chr8 72964774 + Exonic hg19 LUAD TCGA-50-5051-01A 2 9 CDS-5'UTR Inter-chr p12.31 34322 ChimerSeq STARFusion TCGA_RNA-Seq SNORA50-CNOT1 SNORA50 chr16 58593708 - CNOT1 chr16 58594266 - Exonic hg19 LUAD TCGA-44-2656-01A 6 12 3'UTR-CDS Intra-chr q23.3 q21 34323 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-LYRM4 ZFAND3 chr6 37897775 + LYRM4 chr6 5109725 - Exonic hg19 LUAD TCGA-44-2656-01A 2 11 Out-of-frame Intra-chr p21.2 p25.1 Seq+ 34324 ChimerSeq STARFusion TCGA_RNA-Seq PRKRIP1-LOC728537 PRKRIP1 chr7 102047945 + LOC728537 chr2 98306719 + Exonic hg19 LUAD TCGA-44-2656-01A 3 6 CDS-5'UTR Inter-chr q22.1 34325 ChimerSeq STARFusion TCGA_RNA-Seq KAT6A-LOC100130964 KAT6A chr8 41798360 - LOC100130964 chr8 39430763 + Exonic hg19 LUAD TCGA-44-8119-01A 14 36 CDS-5'UTR Intra-chr p11.21 Oncogene 34326 ChimerSeq STARFusion TCGA_RNA-Seq CCNI2-SEPT8 CCNI2 chr5 132089195 + SEPT8 chr5 132092187 - Exonic hg19 LUAD TCGA-44-8119-01A 13 33 Out-of-frame Intra-chr q31.1 q31.1 34327 ChimerSeq STARFusion TCGA_RNA-Seq CEP170-RGS7 CEP170 chr1 243385026 - RGS7 chr1 240990472 - Exonic hg19 LUAD TCGA-44-8119-01A 5 12 In-Frame Intra-chr q43 Seq+ 34328 ChimerSeq STARFusion TCGA_RNA-Seq SPSB1-H6PD SPSB1 chr1 9353130 + H6PD chr1 9322118 + Exonic hg19 LUAD TCGA-44-8119-01A 4 2 5'UTR-CDS Intra-chr p36.22 p36.22 Seq+ 34329 ChimerSeq STARFusion TCGA_RNA-Seq PRKAR1A-CHMP1A PRKAR1A chr17 66511717 + CHMP1A chr16 89713739 - Exonic hg19 LUAD TCGA-44-8119-01A 2 1 In-Frame Inter-chr q24.2 Oncogene Tumor suppressor gene q24.3 34330 ChimerSeq STARFusion TCGA_RNA-Seq UHRF1BP1L-SCYL2 UHRF1BP1L chr12 100536370 - SCYL2 chr12 100704822 + Exonic hg19 LUAD TCGA-44-8119-01A 2 1 Out-of-frame Intra-chr q23.1 q23.1 Other:SCY1 34331 ChimerSeq STARFusion TCGA_RNA-Seq CCDC82-SNHG11 CCDC82 chr11 96123008 - SNHG11 chr20 37076109 + Exonic hg19 LUAD TCGA-44-8119-01A 2 0 5'UTR-5'UTR Inter-chr q21 q11.23 34332 ChimerSeq STARFusion TCGA_RNA-Seq MED1-CDK12 MED1 chr17 37607291 - CDK12 chr17 37627132 + Exonic hg19 LUAD TCGA-95-7947-01A 124 306 Out-of-frame Intra-chr q12 Tumor suppressor gene q12 Oncogene Seq+ 34333 ChimerSeq STARFusion TCGA_RNA-Seq MED1-CDK12 MED1 chr17 37607291 - CDK12 chr17 37627135 + Exonic hg19 LUAD TCGA-95-7947-01A 17 306 Out-of-frame Intra-chr q12 Tumor suppressor gene q12 Oncogene Seq+ 34334 ChimerSeq STARFusion TCGA_RNA-Seq PRPF8-MRPS5 PRPF8 chr17 1587766 - MRPS5 chr2 95767468 - Exonic hg19 LUAD TCGA-95-7947-01A 2 1 In-Frame Inter-chr q11.1 34335 ChimerSeq STARFusion TCGA_RNA-Seq FBXO34-LGALS3 FBXO34 chr14 55738255 + LGALS3 chr14 55606993 + Exonic hg19 LUAD TCGA-44-4112-01A 28 79 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 34336 ChimerSeq STARFusion TCGA_RNA-Seq GAPDH-NCAPD2 GAPDH chr12 6644027 + NCAPD2 chr12 6637339 + Exonic hg19 LUAD TCGA-44-4112-01A 2 173 In-Frame Intra-chr p13.31 p13.31 Seq+ 34337 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC3-CLDN10 DNAJC3 chr13 96329591 + CLDN10 chr13 96212386 + Exonic hg19 LUAD TCGA-44-4112-01A 6 20 In-Frame Intra-chr q32.1 q32.1 Seq+ 34338 ChimerSeq STARFusion TCGA_RNA-Seq GPR160-SEC62 GPR160 chr3 169797685 + SEC62 chr3 169693396 + Exonic hg19 LUAD TCGA-44-4112-01A 4 15 5'UTR-CDS Intra-chr q26.2 q26.2 Seq+ 34339 ChimerSeq STARFusion TCGA_RNA-Seq LONP2-HIRA LONP2 chr16 48337216 + HIRA chr22 19398301 - Exonic hg19 LUAD TCGA-44-4112-01A 3 19 In-Frame Inter-chr q12.1 q11.21 Tumor suppressor gene Seq+ 34340 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-RHOD KDM2A chr11 66888829 + RHOD chr11 66833367 + Exonic hg19 LUAD TCGA-44-4112-01A 4 5 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 34341 ChimerSeq STARFusion TCGA_RNA-Seq MIB1-SNRPD1 MIB1 chr18 19359646 + SNRPD1 chr18 19202686 + Exonic hg19 LUAD TCGA-44-4112-01A 3 8 In-Frame Intra-chr q11.2 q11.2 Seq+ 34342 ChimerSeq STARFusion TCGA_RNA-Seq CDC42SE2-LYRM7 CDC42SE2 chr5 130599859 + LYRM7 chr5 130515788 + Exonic hg19 LUAD TCGA-44-4112-01A 4 2 5'UTR-CDS Intra-chr q31.1 q23.3 Seq+ 34343 ChimerSeq STARFusion TCGA_RNA-Seq SMARCA4-DNM2 SMARCA4 chr19 11145808 + DNM2 chr19 10909162 + Exonic hg19 LUAD TCGA-44-4112-01A 2 7 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 34344 ChimerSeq STARFusion TCGA_RNA-Seq C5orf28-PAIP1 C5orf28 chr5 43483924 - PAIP1 chr5 43556101 - Exonic hg19 LUAD TCGA-44-4112-01A 3 2 5'UTR-5'UTR Intra-chr p12 Seq+ 34345 ChimerSeq STARFusion TCGA_RNA-Seq LMO7-UCHL3 LMO7 chr13 76335174 + UCHL3 chr13 76169051 + Exonic hg19 LUAD TCGA-44-4112-01A 3 1 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 34346 ChimerSeq STARFusion TCGA_RNA-Seq MYO6-SENP6 MYO6 chr6 76459140 + SENP6 chr6 76405520 + Exonic hg19 LUAD TCGA-44-4112-01A 2 5 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 34347 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS3-RSPH1 TMPRSS3 chr21 43795825 - RSPH1 chr21 43913189 - Exonic hg19 LUAD TCGA-44-4112-01A 2 3 In-Frame Intra-chr q22.3 q22.3 Seq+ 34348 ChimerSeq STARFusion TCGA_RNA-Seq ZAK-RAPGEF4 ZAK chr2 173955918 + RAPGEF4 chr2 173825488 + Exonic hg19 LUAD TCGA-44-4112-01A 2 3 In-Frame Intra-chr TKL:MLK q31.1 34349 ChimerSeq STARFusion TCGA_RNA-Seq NOSIP-NAP1L1 NOSIP chr19 50080016 - NAP1L1 chr12 76444433 - Exonic hg19 LUAD TCGA-44-4112-01A 2 0 5'UTR-CDS Inter-chr q13.33 q21.2 34350 ChimerSeq STARFusion TCGA_RNA-Seq ARID1B-PARK2 ARID1B chr6 157150555 + PARK2 chr6 162864505 - Exonic hg19 LUAD TCGA-80-5608-01A 2 20 Out-of-frame Intra-chr q25.3 Oncogene Tumor suppressor gene Seq+ 34351 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-FGF7 PTPRK chr6 128505577 - FGF7 chr15 49775348 + Exonic hg19 LUAD TCGA-80-5608-01A 6 3 In-Frame Inter-chr Tumor suppressor gene q21.2 Seq+ 34352 ChimerSeq STARFusion TCGA_RNA-Seq SDC4-TSHZ2 SDC4 chr20 43976965 - TSHZ2 chr20 52103683 + Exonic hg19 LUAD TCGA-80-5608-01A 2 14 CDS-3'UTR Intra-chr q13.12 q13.2 Transcription factor Seq+ 34353 ChimerSeq STARFusion TCGA_RNA-Seq ATP2A2-IFT81 ATP2A2 chr12 110720600 + IFT81 chr12 110628725 + Exonic hg19 LUAD TCGA-78-7161-01A 48 221 In-Frame Intra-chr q24.11 q24.11 Seq+ 34354 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-CD9 RNA45S5 chrUn_gl000220 115781 + CD9 chr12 6334592 + Exonic hg19 LUAD TCGA-78-7161-01A 28 191 Out-of-frame Inter-chr p13.31 34355 ChimerSeq STARFusion TCGA_RNA-Seq LOC100507412-CD9 LOC100507412 chrUn_gl000220 123082 + CD9 chr12 6334592 + Exonic hg19 LUAD TCGA-78-7161-01A 31 143 5'UTR-CDS Inter-chr p13.31 34356 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-CD9 RNA45S5 chrUn_gl000220 116068 + CD9 chr12 6334592 + Exonic hg19 LUAD TCGA-78-7161-01A 16 191 Out-of-frame Inter-chr p13.31 34357 ChimerSeq STARFusion TCGA_RNA-Seq NDUFV2-LOC645355 NDUFV2 chr18 9122679 + LOC645355 chr18 5793586 + Exonic hg19 LUAD TCGA-78-7161-01A 5 110 CDS-5'UTR Intra-chr p11.22 34358 ChimerSeq STARFusion TCGA_RNA-Seq PAK1-CNIH4 PAK1 chr11 77103376 - CNIH4 chr1 224553581 + Exonic hg19 LUAD TCGA-78-7161-01A 11 55 Out-of-frame Inter-chr q14.1 STE:STE20 q42.11 Seq+ 34359 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF6-SUSD4 RAPGEF6 chr5 130928076 - SUSD4 chr1 223408442 - Exonic hg19 LUAD TCGA-78-7161-01A 11 28 Out-of-frame Inter-chr q31.1 q41 Seq+ 34360 ChimerSeq STARFusion TCGA_RNA-Seq MYL12A-LPIN2 MYL12A chr18 3254048 + LPIN2 chr18 2960847 - Exonic hg19 LUAD TCGA-78-7161-01A 4 21 CDS-5'UTR Intra-chr p11.31 p11.31 Seq+ 34361 ChimerSeq STARFusion TCGA_RNA-Seq TSC22D1-PLEKHA5 TSC22D1 chr13 45147299 - PLEKHA5 chr12 19427450 + Exonic hg19 LUAD TCGA-78-7161-01A 3 19 In-Frame Inter-chr q14.11 Tumor suppressor gene Transcription factor p12.3 Seq+ 34362 ChimerSeq STARFusion TCGA_RNA-Seq TWSG1-MYL12A TWSG1 chr18 9360069 + MYL12A chr18 3253231 + Exonic hg19 LUAD TCGA-78-7161-01A 2 21 CDS-5'UTR Intra-chr p11.22 p11.31 Seq+ 34363 ChimerSeq STARFusion TCGA_RNA-Seq PGM2L1-RBBP5 PGM2L1 chr11 74109096 - RBBP5 chr1 205074296 - Exonic hg19 LUAD TCGA-78-7161-01A 4 2 Out-of-frame Inter-chr q13.4 q32.1 Seq+ 34364 ChimerSeq STARFusion TCGA_RNA-Seq DENND1A-FAM95B1 DENND1A chr9 126345448 - FAM95B1 chr9 43027965 - Exonic hg19 LUAD TCGA-78-7161-01A 3 4 CDS-3'UTR Intra-chr q33.3 p11.2 34365 ChimerSeq STARFusion TCGA_RNA-Seq DLEU2-BMP4 DLEU2 chr13 50642233 - BMP4 chr14 54420118 - Exonic hg19 LUAD TCGA-78-7161-01A 2 8 3'UTR-5'UTR Inter-chr q14.2 Tumor suppressor gene q22.2 Tumor suppressor gene Seq+ 34366 ChimerSeq STARFusion TCGA_RNA-Seq PLA2G10-CLEC16A PLA2G10 chr16 14787990 - CLEC16A chr16 11114050 + Exonic hg19 LUAD TCGA-97-7547-01A 3 44 In-Frame Intra-chr p13.13 Seq+ 34367 ChimerSeq STARFusion TCGA_RNA-Seq PLA2G10-CLEC16A PLA2G10 chr16 14787990 - CLEC16A chr16 11096931 + Exonic hg19 LUAD TCGA-97-7547-01A 2 44 Out-of-frame Intra-chr p13.13 Seq+ 34368 ChimerSeq STARFusion TCGA_RNA-Seq SDC4-YWHAB SDC4 chr20 43976965 - YWHAB chr20 43532634 + Exonic hg19 LUAD TCGA-97-8177-01A 11 83 In-Frame Intra-chr q13.12 q13.12 Seq+ 34369 ChimerSeq STARFusion TCGA_RNA-Seq TOX3-HEYL TOX3 chr16 52497846 - HEYL chr1 40098387 - Exonic hg19 LUAD TCGA-97-8177-01A 4 10 Out-of-frame Inter-chr q12.1 p34.2 Transcription factor Seq+ 34370 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 LUAD TCGA-97-8177-01A 2 1 3'UTR-5'UTR Intra-chr q34 34371 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KC1-CD34 RPS6KC1 chr1 213290752 + CD34 chr1 208073348 - Exonic hg19 LUAD TCGA-50-5932-01A 18 42 In-Frame Intra-chr q32.3 q32.2 Seq+ 34372 ChimerSeq STARFusion TCGA_RNA-Seq TADA1-CADM3 TADA1 chr1 166838682 - CADM3 chr1 159169541 + Exonic hg19 LUAD TCGA-05-4432-01A 50 208 In-Frame Intra-chr q24.1 q23.2 Tumor suppressor gene Seq+ 34373 ChimerSeq STARFusion TCGA_RNA-Seq PACS1-TSGA10IP PACS1 chr11 65978730 + TSGA10IP chr11 65713186 + Exonic hg19 LUAD TCGA-05-4432-01A 8 20 Out-of-frame Intra-chr q13.1 q13.1 34374 ChimerSeq STARFusion TCGA_RNA-Seq TTBK2-SPATA5L1 TTBK2 chr15 43212636 - SPATA5L1 chr15 45709467 + Exonic hg19 LUAD TCGA-05-4432-01A 3 12 5'UTR-5'UTR Intra-chr q15.2 CK1:TTBK q21.1 Seq+ 34375 ChimerSeq STARFusion TCGA_RNA-Seq NARF-OLFML2B NARF chr17 80417948 + OLFML2B chr1 161989972 - Exonic hg19 LUAD TCGA-05-4432-01A 2 4 In-Frame Inter-chr q25.3 q23.3 Seq+ 34376 ChimerSeq STARFusion TCGA_RNA-Seq PRDM16-PRKCZ PRDM16 chr1 3322212 + PRKCZ chr1 2087434 + Exonic hg19 LUAD TCGA-05-4432-01A 3 0 Out-of-frame Intra-chr p36.32 Transcription factor p36.33 34377 ChimerSeq STARFusion TCGA_RNA-Seq DPP3-FEZ1 DPP3 chr11 66254148 + FEZ1 chr11 125333466 - Exonic hg19 LUAD TCGA-05-4432-01A 2 3 In-Frame Intra-chr q13.2 q24.2 Tumor suppressor gene Seq+ 34378 ChimerSeq STARFusion TCGA_RNA-Seq CCDC88C-CATSPERB CCDC88C chr14 91825986 - CATSPERB chr14 92058346 - Exonic hg19 LUAD TCGA-05-4432-01A 2 2 Out-of-frame Intra-chr q32.12 34379 ChimerSeq STARFusion TCGA_RNA-Seq DDI2-MTOR DDI2 chr1 15944303 + MTOR chr1 11227574 - Exonic hg19 LUAD TCGA-MP-A4SW-01A 4 26 Out-of-frame Intra-chr p36.21 p36.22 Oncogene Seq+ 34380 ChimerSeq STARFusion TCGA_RNA-Seq SART3-CORO1C SART3 chr12 108954619 - CORO1C chr12 109041298 - Exonic hg19 LUAD TCGA-MP-A4SW-01A 3 22 In-Frame Intra-chr q23.3 q24.11 Seq+ 34381 ChimerSeq STARFusion TCGA_RNA-Seq SDHB-MST1L SDHB chr1 17380443 - MST1L chr1 17087597 - Exonic hg19 LUAD TCGA-MP-A4SW-01A 2 12 Out-of-frame Intra-chr p36.13 Oncogene Tumor suppressor gene p36.13 Seq+ 34382 ChimerSeq STARFusion TCGA_RNA-Seq MPP5-GPHN MPP5 chr14 67759436 + GPHN chr14 67646295 + Exonic hg19 LUAD TCGA-MP-A4SW-01A 2 4 In-Frame Intra-chr q23.3 q23.3 Seq+ 34383 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 LUAD TCGA-MP-A4SW-01A 2 2 3'UTR-5'UTR Intra-chr q34 34384 ChimerSeq STARFusion TCGA_RNA-Seq PAM16-MKL2 PAM16 chr16 4401233 - MKL2 chr16 14328003 + Exonic hg19 LUAD TCGA-MP-A4SW-01A 2 1 In-Frame Intra-chr p13.3 p13.12 34385 ChimerSeq STARFusion TCGA_RNA-Seq OTUD5-TEX101 OTUD5 chrX 48783123 - TEX101 chr19 43906918 + Exonic hg19 LUAD TCGA-MP-A4SW-01A 2 0 CDS-5'UTR Inter-chr p11.23 q13.31 34386 ChimerSeq STARFusion TCGA_RNA-Seq NCSTN-SPRR2G NCSTN chr1 160324080 + SPRR2G chr1 153122607 - Exonic hg19 LUAD TCGA-97-A4M3-01A 427 1201 CDS-5'UTR Intra-chr q23.2 q21.3 Seq+ 34387 ChimerSeq STARFusion TCGA_RNA-Seq DPP3-FKBP2 DPP3 chr11 66272245 + FKBP2 chr11 64011313 + Exonic hg19 LUAD TCGA-97-A4M3-01A 17 186 In-Frame Intra-chr q13.2 q13.1 Seq+ 34388 ChimerSeq STARFusion TCGA_RNA-Seq DPP3-FKBP2 DPP3 chr11 66272253 + FKBP2 chr11 64011313 + Exonic hg19 LUAD TCGA-97-A4M3-01A 4 186 Out-of-frame Intra-chr q13.2 q13.1 Seq+ 34389 ChimerSeq STARFusion TCGA_RNA-Seq CHKA-HNF1B CHKA chr11 67842184 - HNF1B chr17 36047395 - Exonic hg19 LUAD TCGA-97-A4M3-01A 19 78 In-Frame Inter-chr q13.2 q12 Transcription factor Seq+ 34390 ChimerSeq STARFusion TCGA_RNA-Seq LPCAT1-SDHAP3 LPCAT1 chr5 1477519 - SDHAP3 chr5 1576424 - Exonic hg19 LUAD TCGA-97-A4M3-01A 11 45 CDS-3'UTR Intra-chr p15.33 34391 ChimerSeq STARFusion TCGA_RNA-Seq FAT3-DPP3 FAT3 chr11 92088570 + DPP3 chr11 66276550 + Exonic hg19 LUAD TCGA-97-A4M3-01A 9 48 In-Frame Intra-chr q13.2 Seq+ 34392 ChimerSeq STARFusion TCGA_RNA-Seq TP53BP1-STAU2 TP53BP1 chr15 43720214 - STAU2 chr8 74440039 - Exonic hg19 LUAD TCGA-97-A4M3-01A 6 40 In-Frame Inter-chr q15.3 Tumor suppressor gene q21.11 Seq+ 34393 ChimerSeq STARFusion TCGA_RNA-Seq DGCR8-LOC729444 DGCR8 chr22 20082318 + LOC729444 chr22 20328520 + Exonic hg19 LUAD TCGA-97-A4M3-01A 6 27 CDS-5'UTR Intra-chr q11.21 34394 ChimerSeq STARFusion TCGA_RNA-Seq FAT3-CDH26 FAT3 chr11 92620279 + CDH26 chr20 58581768 + Exonic hg19 LUAD TCGA-97-A4M3-01A 3 17 Out-of-frame Inter-chr q13.33 Seq+ 34395 ChimerSeq STARFusion TCGA_RNA-Seq FAT3-CDH26 FAT3 chr11 92620279 + CDH26 chr20 58577868 + Exonic hg19 LUAD TCGA-97-A4M3-01A 2 17 Out-of-frame Inter-chr q13.33 Seq+ 34396 ChimerSeq STARFusion TCGA_RNA-Seq LHCGR-GTF2A1L LHCGR chr2 48921363 - GTF2A1L chr2 48906474 + Exonic hg19 LUAD TCGA-97-A4M3-01A 2 16 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 34397 ChimerSeq STARFusion TCGA_RNA-Seq LRP5-CHD6 LRP5 chr11 68131411 + CHD6 chr20 40086068 - Exonic hg19 LUAD TCGA-97-A4M3-01A 2 12 Out-of-frame Inter-chr q13.2 q12 Seq+ 34398 ChimerSeq STARFusion TCGA_RNA-Seq WNT7B-DGCR8 WNT7B chr22 46345804 - DGCR8 chr22 20093700 + Exonic hg19 LUAD TCGA-97-A4M3-01A 3 4 Out-of-frame Intra-chr q13.31 q11.21 Seq+ 34399 ChimerSeq STARFusion TCGA_RNA-Seq WNT7B-DGCR8 WNT7B chr22 46345800 - DGCR8 chr22 20093700 + Exonic hg19 LUAD TCGA-97-A4M3-01A 3 4 Out-of-frame Intra-chr q13.31 q11.21 Seq+ 34400 ChimerSeq STARFusion TCGA_RNA-Seq TBCD-RPTOR TBCD chr17 80755678 + RPTOR chr17 78931424 + Exonic hg19 LUAD TCGA-97-A4M3-01A 3 3 In-Frame Intra-chr q25.3 Seq+ 34401 ChimerSeq STARFusion TCGA_RNA-Seq EFCC1-PGC EFCC1 chr3 128758597 + PGC chr6 41711124 - Exonic hg19 LUAD TCGA-97-A4M3-01A 3 1 Out-of-frame Inter-chr q21.3 p21.1 34402 ChimerSeq STARFusion TCGA_RNA-Seq PEX19-LINC00624 PEX19 chr1 160254845 - LINC00624 chr1 146856585 - Exonic hg19 LUAD TCGA-97-A4M3-01A 3 1 Out-of-frame Intra-chr q23.2 q21.2 34403 ChimerSeq STARFusion TCGA_RNA-Seq STAU2-PDE7A STAU2 chr8 74464247 - PDE7A chr8 66695078 - Exonic hg19 LUAD TCGA-97-A4M3-01A 2 4 In-Frame Intra-chr q21.11 q13.1 Seq+ 34404 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-P2RY8 ASMTL chrY 1503915 - P2RY8 chrY 1535475 - Exonic hg19 LUAD TCGA-97-A4M3-01A 2 2 CDS-5'UTR Intra-chr p22.33 p22.33 Seq+ 34405 ChimerSeq STARFusion TCGA_RNA-Seq EML4-ALK EML4 chr2 42552694 + ALK chr2 29446394 - Exonic hg19 LUAD TCGA-86-A4P8-01A 2 4 In-Frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 34406 ChimerSeq STARFusion TCGA_RNA-Seq SFTPB-SIPA1L3 SFTPB chr2 85892728 - SIPA1L3 chr19 38697883 + Exonic hg19 LUAD TCGA-73-7498-01A 4 1 Out-of-frame Inter-chr p11.2 q13.13 34407 ChimerSeq STARFusion TCGA_RNA-Seq TOMM20-LOC493754 TOMM20 chr1 235291913 - LOC493754 chr7 66019143 - Exonic hg19 LUAD TCGA-73-7498-01A 4 1 Out-of-frame Inter-chr q42.3 34408 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-SPAG9 TANC2 chr17 61086987 + SPAG9 chr17 49157065 - Exonic hg19 LUAD TCGA-83-5908-01A 23 67 Out-of-frame Intra-chr q23.2 q21.33 Seq+ 34409 ChimerSeq STARFusion TCGA_RNA-Seq MED13-C20orf118 MED13 chr17 60129898 - C20orf118 chr20 35515858 + Exonic hg19 LUAD TCGA-83-5908-01A 20 71 Out-of-frame Inter-chr q23.2 Seq+ 34410 ChimerSeq STARFusion TCGA_RNA-Seq BRD9-TPPP BRD9 chr5 886707 - TPPP chr5 666238 - Exonic hg19 LUAD TCGA-83-5908-01A 14 43 In-Frame Intra-chr p15.33 p15.33 Seq+ 34411 ChimerSeq STARFusion TCGA_RNA-Seq DOCK8-OSBP DOCK8 chr9 390566 + OSBP chr11 59369311 - Exonic hg19 LUAD TCGA-83-5908-01A 10 37 In-Frame Inter-chr p24.3 q12.1 Seq+ 34412 ChimerSeq STARFusion TCGA_RNA-Seq EARS2-VMP1 EARS2 chr16 23555835 - VMP1 chr17 57915656 + Exonic hg19 LUAD TCGA-83-5908-01A 8 45 In-Frame Inter-chr p12.2 q23.1 Seq+ 34413 ChimerSeq STARFusion TCGA_RNA-Seq CTNND1-DOCK8 CTNND1 chr11 57574455 + DOCK8 chr9 304581 + Exonic hg19 LUAD TCGA-83-5908-01A 7 19 Out-of-frame Inter-chr q12.1 Tumor suppressor gene p24.3 Seq+ 34414 ChimerSeq STARFusion TCGA_RNA-Seq KANK2-DOCK6 KANK2 chr19 11308160 - DOCK6 chr19 11315006 - Exonic hg19 LUAD TCGA-83-5908-01A 8 6 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 34415 ChimerSeq STARFusion TCGA_RNA-Seq SAMHD1-RPN2 SAMHD1 chr20 35532560 - RPN2 chr20 35812583 + Exonic hg19 LUAD TCGA-83-5908-01A 6 14 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 34416 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1432-DCAF10 KIAA1432 chr9 5656690 + DCAF10 chr9 37819285 + Exonic hg19 LUAD TCGA-83-5908-01A 3 25 Out-of-frame Intra-chr p13.2 Seq+ 34417 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-CPM MDM2 chr12 69222711 + CPM chr12 69260828 - Exonic hg19 LUAD TCGA-78-7535-01A 2 1 Out-of-frame Intra-chr q15 Oncogene q15 34418 ChimerSeq STARFusion TCGA_RNA-Seq LMAN2-F12 LMAN2 chr5 176761285 - F12 chr5 176831091 - Exonic hg19 LUAD TCGA-55-8299-01A 38 66 In-Frame Intra-chr q35.3 q35.3 Seq+ 34419 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-TXN2 MYH9 chr22 36718474 - TXN2 chr22 36876884 - Exonic hg19 LUAD TCGA-55-8299-01A 2 8 CDS-5'UTR Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Seq+ 34420 ChimerSeq STARFusion TCGA_RNA-Seq ETNK1-GLT1D1 ETNK1 chr12 22778520 + GLT1D1 chr12 129429871 + Exonic hg19 LUAD TCGA-05-4434-01A 4 20 In-Frame Intra-chr p12.1 q24.33 Seq+ 34421 ChimerSeq STARFusion TCGA_RNA-Seq PI4KA-ZNF274 PI4KA chr22 21101871 - ZNF274 chr19 58718087 + Exonic hg19 LUAD TCGA-05-4434-01A 3 5 Out-of-frame Inter-chr q11.21 q13.43 Transcription factor Seq+ 34422 ChimerSeq STARFusion TCGA_RNA-Seq FAM177A1-KIAA0391 FAM177A1 chr14 35522657 + KIAA0391 chr14 35649876 + Exonic hg19 LUAD TCGA-91-6836-01A 3 108 In-Frame Intra-chr q13.2 q13.2 Seq+ 34423 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-RSBN1L PTPN12 chr7 77166962 + RSBN1L chr7 77365727 + Exonic hg19 LUAD TCGA-91-6836-01A 17 43 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 34424 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-NUFIP2 SSH2 chr17 28256956 - NUFIP2 chr17 27594548 - Exonic hg19 LUAD TCGA-91-6836-01A 17 28 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 34425 ChimerSeq STARFusion TCGA_RNA-Seq C1orf159-SDF4 C1orf159 chr1 1025733 - SDF4 chr1 1164326 - Exonic hg19 LUAD TCGA-91-6836-01A 6 20 CDS-5'UTR Intra-chr p36.33 p36.33 Seq+ 34426 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-UGT1A1 DGKD chr2 234263320 + UGT1A1 chr2 234675680 + Exonic hg19 LUAD TCGA-91-6836-01A 6 20 In-Frame Intra-chr q37.1 Oncogene 34427 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-UGT1A10 DGKD chr2 234263320 + UGT1A10 chr2 234675680 + Exonic hg19 LUAD TCGA-91-6836-01A 6 20 In-Frame Intra-chr q37.1 34428 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-UGT1A3 DGKD chr2 234263320 + UGT1A3 chr2 234675680 + Exonic hg19 LUAD TCGA-91-6836-01A 6 20 In-Frame Intra-chr q37.1 34429 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-UGT1A4 DGKD chr2 234263320 + UGT1A4 chr2 234675680 + Exonic hg19 LUAD TCGA-91-6836-01A 6 20 In-Frame Intra-chr q37.1 Seq+ 34430 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-UGT1A5 DGKD chr2 234263320 + UGT1A5 chr2 234675680 + Exonic hg19 LUAD TCGA-91-6836-01A 6 20 In-Frame Intra-chr q37.1 34431 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-UGT1A6 DGKD chr2 234263320 + UGT1A6 chr2 234675680 + Exonic hg19 LUAD TCGA-91-6836-01A 6 20 In-Frame Intra-chr q37.1 34432 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-UGT1A7 DGKD chr2 234263320 + UGT1A7 chr2 234675680 + Exonic hg19 LUAD TCGA-91-6836-01A 6 20 In-Frame Intra-chr q37.1 34433 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-UGT1A8 DGKD chr2 234263320 + UGT1A8 chr2 234675680 + Exonic hg19 LUAD TCGA-91-6836-01A 6 20 In-Frame Intra-chr q37.1 34434 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-UGT1A9 DGKD chr2 234263320 + UGT1A9 chr2 234675680 + Exonic hg19 LUAD TCGA-91-6836-01A 6 20 In-Frame Intra-chr q37.1 34435 ChimerSeq STARFusion TCGA_RNA-Seq CLK2-ASH1L CLK2 chr1 155236520 - ASH1L chr1 155313533 - Exonic hg19 LUAD TCGA-91-6836-01A 5 20 In-Frame Intra-chr q22 CMGC:CLK q22 Transcription factor Seq+ 34436 ChimerSeq STARFusion TCGA_RNA-Seq CDH1-VPS4A CDH1 chr16 68772314 + VPS4A chr16 69349911 + Exonic hg19 LUAD TCGA-91-6836-01A 5 12 Out-of-frame Intra-chr q22.1 Oncogene Tumor suppressor gene q22.1 Seq+ 34437 ChimerSeq STARFusion TCGA_RNA-Seq ARID4A-KIAA0586 ARID4A chr14 58768408 + KIAA0586 chr14 59006789 + Exonic hg19 LUAD TCGA-91-6836-01A 2 17 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 34438 ChimerSeq STARFusion TCGA_RNA-Seq TG-THADA TG chr8 133984986 + THADA chr2 43520352 - Exonic hg19 LUAD TCGA-91-6836-01A 4 8 In-Frame Inter-chr q24.22 p21 Seq+ 34439 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC1-SKIDA1 DNAJC1 chr10 22209727 - SKIDA1 chr10 21812800 - Exonic hg19 LUAD TCGA-91-6836-01A 3 11 Out-of-frame Intra-chr p12.31 p12.31 Seq+ 34440 ChimerSeq STARFusion TCGA_RNA-Seq NOSIP-NAP1L1 NOSIP chr19 50080016 - NAP1L1 chr12 76444433 - Exonic hg19 LUAD TCGA-91-6836-01A 4 0 5'UTR-CDS Inter-chr q13.33 q21.2 34441 ChimerSeq STARFusion TCGA_RNA-Seq HINT3-NCOA7 HINT3 chr6 126278324 + NCOA7 chr6 126176166 + Exonic hg19 LUAD TCGA-91-6836-01A 2 6 Out-of-frame Intra-chr q22.32 q22.31 34442 ChimerSeq STARFusion TCGA_RNA-Seq ABR-NXN ABR chr17 1082961 - NXN chr17 729318 - Exonic hg19 LUAD TCGA-91-6836-01A 2 5 Out-of-frame Intra-chr p13.3 p13.3 34443 ChimerSeq STARFusion TCGA_RNA-Seq EDF1-TPRN EDF1 chr9 139757740 - TPRN chr9 140087143 - Exonic hg19 LUAD TCGA-91-6836-01A 2 1 In-Frame Intra-chr q34.3 q34.3 34444 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-PIP4K2C FRS2 chr12 69962876 + PIP4K2C chr12 57994107 + Exonic hg19 LUAD TCGA-55-7907-01A 6 42 In-Frame Intra-chr q15 q13.3 Seq+ 34445 ChimerSeq STARFusion TCGA_RNA-Seq OS9-LOC100507412 OS9 chr12 58090156 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LUAD TCGA-55-7907-01A 2 30 CDS-5'UTR Inter-chr q13.3 34446 ChimerSeq STARFusion TCGA_RNA-Seq UNC50-STARD7 UNC50 chr2 99227358 + STARD7 chr2 96859090 - Exonic hg19 LUAD TCGA-55-7907-01A 4 12 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 34447 ChimerSeq STARFusion TCGA_RNA-Seq TMEM132D-STX2 TMEM132D chr12 130387806 - STX2 chr12 131297576 - Exonic hg19 LUAD TCGA-55-7907-01A 2 2 In-Frame Intra-chr q24.33 q24.33 Seq+ 34448 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 LUAD TCGA-44-6777-01A 2 1 3'UTR-5'UTR Intra-chr q34 34449 ChimerSeq STARFusion TCGA_RNA-Seq PTBP1-AP3D1 PTBP1 chr19 807902 + AP3D1 chr19 2101399 - Exonic hg19 LUAD TCGA-67-6217-01A 45 318 CDS-3'UTR Intra-chr p13.3 p13.3 Seq+ 34450 ChimerSeq STARFusion TCGA_RNA-Seq PTBP1-AP3D1 PTBP1 chr19 806556 + AP3D1 chr19 2101399 - Exonic hg19 LUAD TCGA-67-6217-01A 27 318 CDS-3'UTR Intra-chr p13.3 p13.3 Seq+ 34451 ChimerSeq STARFusion TCGA_RNA-Seq TNKS-FAM86B3P TNKS chr8 9437893 + FAM86B3P chr8 8101621 + Exonic hg19 LUAD TCGA-67-6217-01A 5 18 Out-of-frame Intra-chr p23.1 p23.1 Seq+ 34452 ChimerSeq STARFusion TCGA_RNA-Seq WBP1L-TRIM8 WBP1L chr10 104503900 + TRIM8 chr10 104414410 + Exonic hg19 LUAD TCGA-67-6217-01A 2 8 In-Frame Intra-chr q24.32 q24.32 Seq+ 34453 ChimerSeq STARFusion TCGA_RNA-Seq BPTF-BCAS3 BPTF chr17 65936772 + BCAS3 chr17 59445688 + Exonic hg19 LUAD TCGA-67-6217-01A 2 7 Out-of-frame Intra-chr q24.2 Transcription factor q23.2 Seq+ 34454 ChimerSeq STARFusion TCGA_RNA-Seq CDC37-MLL3 CDC37 chr19 10514054 - MLL3 chr7 151836876 - Exonic hg19 LUAD TCGA-67-6217-01A 2 3 In-Frame Inter-chr p13.2 Tumor suppressor gene 34455 ChimerSeq STARFusion TCGA_RNA-Seq PSMA6-G2E3 PSMA6 chr14 35761758 + G2E3 chr14 31067689 + Exonic hg19 LUAD TCGA-67-6217-01A 2 1 Out-of-frame Intra-chr q13.2 q12 34456 ChimerSeq STARFusion TCGA_RNA-Seq C3orf27-SCNM1 C3orf27 chr3 128294109 - SCNM1 chr1 151138947 + Exonic hg19 LUAD TCGA-67-6217-01A 2 0 5'UTR-5'UTR Inter-chr q21.3 34457 ChimerSeq STARFusion TCGA_RNA-Seq CD2AP-SUPT3H CD2AP chr6 47501491 + SUPT3H chr6 45073743 - Exonic hg19 LUAD TCGA-55-1595-01A 2 29 Out-of-frame Intra-chr p12.3 p21.1 Seq+ 34458 ChimerSeq STARFusion TCGA_RNA-Seq SFTPB-SIPA1L3 SFTPB chr2 85892728 - SIPA1L3 chr19 38697883 + Exonic hg19 LUAD TCGA-55-1595-01A 5 2 Out-of-frame Inter-chr p11.2 q13.13 34459 ChimerSeq STARFusion TCGA_RNA-Seq HSPA12A-KIAA1598 HSPA12A chr10 118501941 - KIAA1598 chr10 118646077 - Exonic hg19 LUAD TCGA-05-4430-01A 2 5 Out-of-frame Intra-chr q25.3 Seq+ 34460 ChimerSeq STARFusion TCGA_RNA-Seq HSPG2-NTNG1 HSPG2 chr1 22222415 - NTNG1 chr1 107866904 + Exonic hg19 LUAD TCGA-05-4430-01A 2 4 Out-of-frame Intra-chr p36.12 p13.3 Seq+ 34461 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 58003943 + VMP1 chr17 57917129 + Exonic hg19 LUAD TCGA-86-7711-01A 16 373 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 34462 ChimerSeq STARFusion TCGA_RNA-Seq TMEM50B-LOC100507412 TMEM50B chr21 34852145 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LUAD TCGA-86-7711-01A 21 125 5'UTR-5'UTR Inter-chr 34463 ChimerSeq STARFusion TCGA_RNA-Seq CSNK2A1-LOC100507412 CSNK2A1 chr20 524316 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LUAD TCGA-86-7711-01A 2 4 5'UTR-5'UTR Inter-chr p13 Oncogene 34464 ChimerSeq STARFusion TCGA_RNA-Seq LOC100129917-GAK LOC100129917 chr4 775560 - GAK chr4 845762 - Exonic hg19 LUAD TCGA-86-7711-01A 2 4 3'UTR-CDS Intra-chr p16.3 Other:NAK 34465 ChimerSeq STARFusion TCGA_RNA-Seq RAP1GAP-USP48 RAP1GAP chr1 21935343 - USP48 chr1 22021714 - Exonic hg19 LUAD TCGA-86-7711-01A 2 1 In-Frame Intra-chr p36.12 Tumor suppressor gene p36.12 Seq+ 34466 ChimerSeq STARFusion TCGA_RNA-Seq DCHS2-FGG DCHS2 chr4 155410456 - FGG chr4 155533353 - Exonic hg19 LUAD TCGA-49-6743-01A 45 359 In-Frame Intra-chr q32.1 Seq+ 34467 ChimerSeq STARFusion TCGA_RNA-Seq DCHS2-FGG DCHS2 chr4 155410456 - FGG chr4 155533050 - Exonic hg19 LUAD TCGA-49-6743-01A 8 359 Out-of-frame Intra-chr q32.1 Seq+ 34468 ChimerSeq STARFusion TCGA_RNA-Seq CCDC97-GTF2A2 CCDC97 chr19 41816261 + GTF2A2 chr15 59944525 - Exonic hg19 LUAD TCGA-49-6743-01A 30 214 CDS-5'UTR Inter-chr q13.2 q22.2 Seq+ 34469 ChimerSeq STARFusion TCGA_RNA-Seq REL-MVP REL chr2 61144152 + MVP chr16 29847025 + Exonic hg19 LUAD TCGA-49-6743-01A 47 132 In-Frame Inter-chr p16.1 Oncogene Transcription factor p11.2 Seq+ 34470 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992064 + VMP1 chr17 57915656 + Exonic hg19 LUAD TCGA-49-6743-01A 2 3 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 34471 ChimerSeq STARFusion TCGA_RNA-Seq TYW1-TSFM TYW1 chr7 66463941 + TSFM chr12 58176893 + Exonic hg19 LUAD TCGA-50-5055-01A 2 13 In-Frame Inter-chr q11.21 q14.1 Seq+ 34472 ChimerSeq STARFusion TCGA_RNA-Seq C22orf32-NFAM1 C22orf32 chr22 42475958 + NFAM1 chr22 42783084 - Exonic hg19 LUAD TCGA-44-6147-01A 3 7 In-Frame Intra-chr q13.2 Seq+ 34473 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF4-SLC24A3 TM9SF4 chr20 30697558 + SLC24A3 chr20 19662502 + Exonic hg19 LUAD TCGA-44-6147-01A 3 0 Out-of-frame Intra-chr q11.21 p11.23 34474 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57990165 + VMP1 chr17 57915656 + Exonic hg19 LUAD TCGA-49-4505-01A 35 111 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 34475 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-IFI6 WASF2 chr1 27816497 - IFI6 chr1 27995857 - Exonic hg19 LUAD TCGA-49-4505-01A 22 109 5'UTR-5'UTR Intra-chr p36.11 p35.3 Seq+ 34476 ChimerSeq STARFusion TCGA_RNA-Seq RNF130-RASGEF1C RNF130 chr5 179498456 - RASGEF1C chr5 179538580 - Exonic hg19 LUAD TCGA-49-4505-01A 5 10 Out-of-frame Intra-chr q35.3 q35.3 Seq+ 34477 ChimerSeq STARFusion TCGA_RNA-Seq TMEM161B-FAM81B TMEM161B chr5 87521586 - FAM81B chr5 94749651 + Exonic hg19 LUAD TCGA-97-8547-01A 4 21 Out-of-frame Intra-chr q14.3 q15 Seq+ 34478 ChimerSeq STARFusion TCGA_RNA-Seq TMEM161B-FAM81B TMEM161B chr5 87524262 - FAM81B chr5 94749651 + Exonic hg19 LUAD TCGA-97-8547-01A 3 21 In-Frame Intra-chr q14.3 q15 Seq+ 34479 ChimerSeq STARFusion TCGA_RNA-Seq RPRD2-CA14 RPRD2 chr1 150337395 + CA14 chr1 150232546 + Exonic hg19 LUAD TCGA-55-7227-01A 4 3 In-Frame Intra-chr q21.2 q21.2 Seq+ 34480 ChimerSeq STARFusion TCGA_RNA-Seq RNF139-EIF2A RNF139 chr8 125487531 + EIF2A chr3 150270143 + Exonic hg19 LUAD TCGA-69-8254-01A 4 36 In-Frame Inter-chr q24.13 q25.1 Seq+ 34481 ChimerSeq STARFusion TCGA_RNA-Seq ABHD2-VAPA ABHD2 chr15 89744857 + VAPA chr18 9931891 + Exonic hg19 LUAD TCGA-78-7167-01A 3 1 Out-of-frame Inter-chr q26.1 p11.22 Seq+ 34482 ChimerSeq STARFusion TCGA_RNA-Seq HIC2-PI4KAP1 HIC2 chr22 21797146 + PI4KAP1 chr22 20394648 - Exonic hg19 LUAD TCGA-78-7167-01A 2 1 CDS-3'UTR Intra-chr q11.21 Transcription factor q11.21 34483 ChimerSeq STARFusion TCGA_RNA-Seq SECISBP2-NEDD4L SECISBP2 chr9 91956394 + NEDD4L chr18 56063399 + Exonic hg19 LUAD TCGA-86-8075-01A 15 64 Out-of-frame Inter-chr q22.2 q21.31 Tumor suppressor gene Seq+ 34484 ChimerSeq STARFusion TCGA_RNA-Seq FHOD3-MYOM1 FHOD3 chr18 33952707 + MYOM1 chr18 3102628 - Exonic hg19 LUAD TCGA-86-8075-01A 17 36 In-Frame Intra-chr q12.2 p11.31 Seq+ 34485 ChimerSeq STARFusion TCGA_RNA-Seq NDUFV2-CHST9 NDUFV2 chr18 9117901 + CHST9 chr18 24524330 - Exonic hg19 LUAD TCGA-86-8075-01A 6 21 Out-of-frame Intra-chr p11.22 q11.2 Seq+ 34486 ChimerSeq STARFusion TCGA_RNA-Seq DAPK1-AGTPBP1 DAPK1 chr9 90114054 + AGTPBP1 chr9 88236200 - Exonic hg19 LUAD TCGA-86-8075-01A 7 12 In-Frame Intra-chr q21.33 CAMK:DAPK Tumor suppressor gene q21.33 Seq+ 34487 ChimerSeq STARFusion TCGA_RNA-Seq NDUFV2-CHST9 NDUFV2 chr18 9119386 + CHST9 chr18 24524330 - Exonic hg19 LUAD TCGA-86-8075-01A 4 21 Out-of-frame Intra-chr p11.22 q11.2 Seq+ 34488 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD13C-HHLA3 ANKRD13C chr1 70801741 - HHLA3 chr1 70832127 + Exonic hg19 LUAD TCGA-86-8075-01A 2 13 In-Frame Intra-chr p31.1 p31.1 Seq+ 34489 ChimerSeq STARFusion TCGA_RNA-Seq GNA12-RNPC3 GNA12 chr7 2834562 - RNPC3 chr1 104097656 + Exonic hg19 LUAD TCGA-86-8075-01A 2 1 CDS-3'UTR Inter-chr p22.2 p21.1 34490 ChimerSeq STARFusion TCGA_RNA-Seq PPP1CB-PLB1 PPP1CB chr2 29011675 + PLB1 chr2 28739675 + Exonic hg19 LUAD TCGA-86-8075-01A 2 0 Out-of-frame Intra-chr p23.2 p23.2 Seq+ 34491 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL2-DLGAP4 OSBPL2 chr20 60813653 + DLGAP4 chr20 35152653 + Exonic hg19 LUAD TCGA-75-6211-01A 21 19 5'UTR-CDS Intra-chr q13.33 q11.23 Seq+ 34492 ChimerSeq STARFusion TCGA_RNA-Seq SNX27-TARS2 SNX27 chr1 151655921 + TARS2 chr1 150476811 + Exonic hg19 LUAD TCGA-75-6211-01A 8 14 In-Frame Intra-chr q21.3 q21.2 Seq+ 34493 ChimerSeq STARFusion TCGA_RNA-Seq MGAT4A-KIAA1211L MGAT4A chr2 99342702 - KIAA1211L chr2 99463273 - Exonic hg19 LUAD TCGA-75-6211-01A 6 13 Out-of-frame Intra-chr q11.2 q11.2 34494 ChimerSeq STARFusion TCGA_RNA-Seq FAM118B-ST3GAL4 FAM118B chr11 126110939 + ST3GAL4 chr11 126275991 + Exonic hg19 LUAD TCGA-75-6211-01A 4 11 CDS-5'UTR Intra-chr q24.2 q24.2 Seq+ 34495 ChimerSeq STARFusion TCGA_RNA-Seq NFIB-ZDHHC21 NFIB chr9 14306988 - ZDHHC21 chr9 14662324 - Exonic hg19 LUAD TCGA-75-6211-01A 3 10 In-Frame Intra-chr p22.3 Transcription factor p22.3 Seq+ 34496 ChimerSeq STARFusion TCGA_RNA-Seq CSRNP2-GLS2 CSRNP2 chr12 51477122 - GLS2 chr12 56874171 - Exonic hg19 LUAD TCGA-75-6211-01A 3 5 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.3 Tumor suppressor gene Seq+ 34497 ChimerSeq STARFusion TCGA_RNA-Seq LINC00340-CDKAL1 LINC00340 chr6 21979291 + CDKAL1 chr6 20649524 + Exonic hg19 LUAD TCGA-75-6211-01A 3 4 5'UTR-CDS Intra-chr p22.3 34498 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-LOC100506844 CTDSP2 chr12 58240155 - LOC100506844 chr12 58329336 - Exonic hg19 LUAD TCGA-75-6211-01A 2 3 CDS-3'UTR Intra-chr q14.1 34499 ChimerSeq STARFusion TCGA_RNA-Seq ACO2-ZC3H7B ACO2 chr22 41865186 + ZC3H7B chr22 41716659 + Exonic hg19 LUAD TCGA-75-6211-01A 2 1 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 34500 ChimerSeq STARFusion TCGA_RNA-Seq CDK5RAP1-CDH4 CDK5RAP1 chr20 31967267 - CDH4 chr20 60503248 + Exonic hg19 LUAD TCGA-75-6211-01A 2 1 Out-of-frame Intra-chr q11.21 q13.33 Tumor suppressor gene 34501 ChimerSeq STARFusion TCGA_RNA-Seq PHIP-HMGN3 PHIP chr6 79752560 - HMGN3 chr6 79924739 - Exonic hg19 LUAD TCGA-75-6211-01A 2 1 In-Frame Intra-chr q14.1 q14.1 Transcription factor Seq+ 34502 ChimerSeq STARFusion TCGA_RNA-Seq POLR1D-GTF3A POLR1D chr13 28222590 + GTF3A chr13 28004007 + Exonic hg19 LUAD TCGA-75-6211-01A 2 1 In-Frame Intra-chr q12.2 q12.2 Transcription factor 34503 ChimerSeq STARFusion TCGA_RNA-Seq SUGT1-NOL6 SUGT1 chr13 53237247 + NOL6 chr9 33472410 - Exonic hg19 LUAD TCGA-93-7347-01A 2 1 In-Frame Inter-chr q14.3 p13.3 34504 ChimerSeq STARFusion TCGA_RNA-Seq ATXN1-CGA ATXN1 chr6 16658007 - CGA chr6 87797925 - Exonic hg19 LUAD TCGA-95-7039-01A 3 6 5'UTR-5'UTR Intra-chr p22.3 q14.3 Seq+ 34505 ChimerSeq STARFusion TCGA_RNA-Seq COPB2-MRPS22 COPB2 chr3 139086987 - MRPS22 chr3 139074524 + Exonic hg19 LUAD TCGA-95-7039-01A 3 5 Out-of-frame Intra-chr q23 q23 34506 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-GALNT10 MKL1 chr22 40859225 - GALNT10 chr5 153709132 + Exonic hg19 LUAD TCGA-95-7039-01A 2 1 Out-of-frame Inter-chr q13.2 q33.2 34507 ChimerSeq STARFusion TCGA_RNA-Seq SEMA3F-SLC9A9 SEMA3F chr3 50192997 + SLC9A9 chr3 143186032 - Exonic hg19 LUAD TCGA-95-7039-01A 2 1 5'UTR-CDS Intra-chr p21.31 Tumor suppressor gene q24 Seq+ 34508 ChimerSeq STARFusion TCGA_RNA-Seq PTPN2-MYL12B PTPN2 chr18 12884072 - MYL12B chr18 3277251 + Exonic hg19 LUAD TCGA-93-A4JP-01A 139 1003 Out-of-frame Intra-chr p11.21 Tumor suppressor gene p11.31 Seq+ 34509 ChimerSeq STARFusion TCGA_RNA-Seq DDT-GSTT1 DDT chr22 24315957 - GSTT1 chr22 24379511 - Exonic hg19 LUAD TCGA-93-A4JP-01A 3 20 In-Frame Intra-chr Tumor suppressor gene 34510 ChimerSeq STARFusion TCGA_RNA-Seq STIM1-NUP98 STIM1 chr11 3877639 + NUP98 chr11 3756554 - Exonic hg19 LUAD TCGA-93-A4JP-01A 2 12 In-Frame Intra-chr p15.4 p15.4 Oncogene Tumor suppressor gene Seq+ 34511 ChimerSeq STARFusion TCGA_RNA-Seq PRMT2-STX18 PRMT2 chr21 48068531 + STX18 chr4 4473433 - Exonic hg19 LUAD TCGA-93-A4JP-01A 3 7 In-Frame Inter-chr q22.3 p16.2 Seq+ 34512 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-PGA4 RNA45S5 chrUn_gl000220 106452 + PGA4 chr11 60996143 + Exonic hg19 LUAD TCGA-38-4629-01A 87 192 Out-of-frame Inter-chr q12.2 34513 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-PGA3 RNA45S5 chrUn_gl000220 106452 + PGA3 chr11 60977314 + Exonic hg19 LUAD TCGA-38-4629-01A 13 87 Out-of-frame Inter-chr q12.2 34514 ChimerSeq STARFusion TCGA_RNA-Seq ZNF277-CPT1A ZNF277 chr7 111846862 + CPT1A chr11 68527806 - Exonic hg19 LUAD TCGA-38-4629-01A 5 41 Out-of-frame Inter-chr q31.1 Transcription factor q13.3 Seq+ 34515 ChimerSeq STARFusion TCGA_RNA-Seq ZNF277-LOC100507412 ZNF277 chr7 111846862 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LUAD TCGA-38-4629-01A 4 36 CDS-5'UTR Inter-chr q31.1 Transcription factor 34516 ChimerSeq STARFusion TCGA_RNA-Seq RBM48-PPP1R3A RBM48 chr7 92161863 + PPP1R3A chr7 113558352 - Exonic hg19 LUAD TCGA-38-4629-01A 6 19 Out-of-frame Intra-chr q21.2 q31.1 Seq+ 34517 ChimerSeq STARFusion TCGA_RNA-Seq SEMA3A-MDFIC SEMA3A chr7 83823791 - MDFIC chr7 114655742 + Exonic hg19 LUAD TCGA-38-4629-01A 2 7 In-Frame Intra-chr q21.11 q31.1 Seq+ 34518 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57697534 + VMP1 chr17 57886157 + Exonic hg19 LUAD TCGA-38-4629-01A 2 2 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 34519 ChimerSeq STARFusion TCGA_RNA-Seq LINGO2-MOB3B LINGO2 chr9 28295206 - MOB3B chr9 27330614 - Exonic hg19 LUAD TCGA-49-4506-01A 3 2 5'UTR-CDS Intra-chr p21.1 p21.2 34520 ChimerSeq STARFusion TCGA_RNA-Seq SLC16A14-SP110 SLC16A14 chr2 230914477 - SP110 chr2 231076268 - Exonic hg19 LUAD TCGA-78-7536-01A 248 1006 In-Frame Intra-chr q36.3 q37.1 Transcription factor Seq+ 34521 ChimerSeq STARFusion TCGA_RNA-Seq SLC16A14-SP110 SLC16A14 chr2 230923810 - SP110 chr2 231076268 - Exonic hg19 LUAD TCGA-78-7536-01A 58 1006 In-Frame Intra-chr q36.3 q37.1 Transcription factor Seq+ 34522 ChimerSeq STARFusion TCGA_RNA-Seq MVB12B-TMC1 MVB12B chr9 129157976 + TMC1 chr9 75355035 + Exonic hg19 LUAD TCGA-78-7536-01A 4 42 Out-of-frame Intra-chr q33.3 q21.13 Seq+ 34523 ChimerSeq STARFusion TCGA_RNA-Seq HDAC4-SNX18 HDAC4 chr2 240158289 - SNX18 chr5 53839009 + Exonic hg19 LUAD TCGA-78-7536-01A 4 33 In-Frame Inter-chr q37.3 q11.2 Seq+ 34524 ChimerSeq STARFusion TCGA_RNA-Seq STRBP-ASTN2 STRBP chr9 125932181 - ASTN2 chr9 119414072 - Exonic hg19 LUAD TCGA-78-7536-01A 7 21 In-Frame Intra-chr q33.3 q33.1 Seq+ 34525 ChimerSeq STARFusion TCGA_RNA-Seq EPS8-PRH2 EPS8 chr12 15942095 - PRH2 chr12 11082868 + Exonic hg19 LUAD TCGA-78-7536-01A 5 15 5'UTR-CDS Intra-chr p12.3 Seq+ 34526 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R13B-BAG5 PPP1R13B chr14 104313636 - BAG5 chr14 104027529 - Exonic hg19 LUAD TCGA-78-7536-01A 4 8 Out-of-frame Intra-chr q32.33 q32.33 Seq+ 34527 ChimerSeq STARFusion TCGA_RNA-Seq TANC1-NR4A2 TANC1 chr2 159857701 + NR4A2 chr2 157187303 - Exonic hg19 LUAD TCGA-78-7536-01A 5 3 5'UTR-5'UTR Intra-chr q24.2 q24.1 Transcription factor Seq+ 34528 ChimerSeq STARFusion TCGA_RNA-Seq CLNS1A-SMIM15 CLNS1A chr11 77348635 - SMIM15 chr5 60457054 - Exonic hg19 LUAD TCGA-78-7536-01A 5 1 Out-of-frame Inter-chr q14.1 q12.1 Seq+ 34529 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-SPAG1 VPS13B chr8 100883925 + SPAG1 chr8 101174507 + Exonic hg19 LUAD TCGA-78-7536-01A 2 4 CDS-5'UTR Intra-chr q22.2 q22.2 Seq+ 34530 ChimerSeq STARFusion TCGA_RNA-Seq ZNF268-ASB1 ZNF268 chr12 133758616 + ASB1 chr2 239352983 + Exonic hg19 LUAD TCGA-78-7536-01A 2 4 Out-of-frame Inter-chr q24.33 Transcription factor q37.3 Seq+ 34531 ChimerSeq STARFusion TCGA_RNA-Seq ITGA9-SEC13 ITGA9 chr3 37792060 + SEC13 chr3 10347376 - Exonic hg19 LUAD TCGA-MP-A4TK-01A 75 282 In-Frame Intra-chr p22.2 Oncogene p25.3 Seq+ 34532 ChimerSeq STARFusion TCGA_RNA-Seq FYCO1-ATG7 FYCO1 chr3 46021197 - ATG7 chr3 11421446 + Exonic hg19 LUAD TCGA-MP-A4TK-01A 16 48 In-Frame Intra-chr p21.31 p25.3 Seq+ 34533 ChimerSeq STARFusion TCGA_RNA-Seq MAN2A1-LOC100506714 MAN2A1 chr5 109125228 + LOC100506714 chr22 45530678 - Exonic hg19 LUAD TCGA-MP-A4TK-01A 6 21 CDS-3'UTR Inter-chr q21.3 34534 ChimerSeq STARFusion TCGA_RNA-Seq PCSK5-OSTF1 PCSK5 chr9 78506289 + OSTF1 chr9 77761599 + Exonic hg19 LUAD TCGA-MP-A4TK-01A 3 27 Out-of-frame Intra-chr q21.13 q21.13 Seq+ 34535 ChimerSeq STARFusion TCGA_RNA-Seq CCDC117-OSTF1 CCDC117 chr22 29169766 + OSTF1 chr9 77761599 + Exonic hg19 LUAD TCGA-MP-A4TK-01A 3 14 Out-of-frame Inter-chr q12.1 q21.13 Seq+ 34536 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-LOC653486 MKL1 chr22 40859225 - LOC653486 chr11 194418 + Exonic hg19 LUAD TCGA-MP-A4TK-01A 5 6 Out-of-frame Inter-chr q13.2 34537 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-SCGB1C1 MKL1 chr22 40859225 - SCGB1C1 chr11 194418 + Exonic hg19 LUAD TCGA-MP-A4TK-01A 5 6 Out-of-frame Inter-chr q13.2 p15.5 Seq+ 34538 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-LOC653486 MKL1 chr22 40859225 - LOC653486 chr11 193712 + Exonic hg19 LUAD TCGA-MP-A4TK-01A 2 6 In-Frame Inter-chr q13.2 34539 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-SCGB1C1 MKL1 chr22 40859225 - SCGB1C1 chr11 193712 + Exonic hg19 LUAD TCGA-MP-A4TK-01A 2 6 In-Frame Inter-chr q13.2 p15.5 Seq+ 34540 ChimerSeq STARFusion TCGA_RNA-Seq TMEM9-MYO5B TMEM9 chr1 201112948 - MYO5B chr18 47421544 - Exonic hg19 LUAD TCGA-91-6848-01A 6 60 In-Frame Inter-chr q32.1 q21.1 Seq+ 34541 ChimerSeq STARFusion TCGA_RNA-Seq EIF6-UQCC EIF6 chr20 33871979 - UQCC chr20 33902568 - Exonic hg19 LUAD TCGA-91-6848-01A 2 24 In-Frame Intra-chr q11.22 34542 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-ANKRD11 PTK2 chr8 142011224 - ANKRD11 chr16 89484776 - Exonic hg19 LUAD TCGA-91-6848-01A 2 12 5'UTR-5'UTR Inter-chr q24.3 q24.3 Seq+ 34543 ChimerSeq STARFusion TCGA_RNA-Seq CBX4-RFK CBX4 chr17 77811636 - RFK chr9 79003572 - Exonic hg19 LUAD TCGA-97-A4M1-01A 2 39 Out-of-frame Inter-chr q25.3 q21.13 Seq+ 34544 ChimerSeq STARFusion TCGA_RNA-Seq CEP72-PAPD7 CEP72 chr5 624694 + PAPD7 chr5 6748577 + Exonic hg19 LUAD TCGA-97-A4M1-01A 2 3 Out-of-frame Intra-chr p15.31 34545 ChimerSeq STARFusion TCGA_RNA-Seq MCU-CNNM2 MCU chr10 74475660 + CNNM2 chr10 104687102 + Exonic hg19 LUAD TCGA-49-4494-01A 4 6 Out-of-frame Intra-chr q22.1 q24.32 Seq+ 34546 ChimerSeq STARFusion TCGA_RNA-Seq RPS20-TMEM70 RPS20 chr8 56986624 - TMEM70 chr8 74894458 + Exonic hg19 LUAD TCGA-49-4494-01A 5 1 Out-of-frame Intra-chr q12.1 q21.11 34547 ChimerSeq STARFusion TCGA_RNA-Seq SHANK2-BANF1 SHANK2 chr11 70935743 - BANF1 chr11 65771097 + Exonic hg19 LUAD TCGA-49-4494-01A 3 7 5'UTR-CDS Intra-chr q13.4 q13.1 Seq+ 34548 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPA2B1-CAPN8 HNRNPA2B1 chr7 26240192 - CAPN8 chr1 223718212 - Exonic hg19 LUAD TCGA-49-4494-01A 2 2 In-Frame Inter-chr p15.2 q41 34549 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1429-PNLIPRP1 KIAA1429 chr8 95556055 - PNLIPRP1 chr10 118350642 + Exonic hg19 LUAD TCGA-86-8279-01A 5 9 CDS-5'UTR Inter-chr q22.1 q25.3 Seq+ 34550 ChimerSeq STARFusion TCGA_RNA-Seq WSB1-XKR4 WSB1 chr17 25621461 + XKR4 chr8 56270238 + Exonic hg19 LUAD TCGA-86-8279-01A 2 17 Out-of-frame Inter-chr q11.1 q12.1 Seq+ 34551 ChimerSeq STARFusion TCGA_RNA-Seq ASB8-NELL2 ASB8 chr12 48544984 - NELL2 chr12 44902767 - Exonic hg19 LUAD TCGA-86-8279-01A 3 3 In-Frame Intra-chr q13.11 q12 Seq+ 34552 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0146-SNTG1 KIAA0146 chr8 48614577 + SNTG1 chr8 51306772 + Exonic hg19 LUAD TCGA-86-8279-01A 2 1 CDS-5'UTR Intra-chr q11.21 34553 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160144041 - Exonic hg19 LUAD TCGA-MP-A4TD-01A 2 2 3'UTR-5'UTR Intra-chr q34 34554 ChimerSeq STARFusion TCGA_RNA-Seq MAL2-ARFGEF1 MAL2 chr8 120220844 + ARFGEF1 chr8 68130373 - Exonic hg19 LUAD TCGA-05-4422-01A 92 148 In-Frame Intra-chr q24.12 q13.2 Seq+ 34555 ChimerSeq STARFusion TCGA_RNA-Seq ZHX1-RALYL ZHX1 chr8 124286457 - RALYL chr8 85686814 + Exonic hg19 LUAD TCGA-05-4422-01A 36 131 5'UTR-CDS Intra-chr q24.13 Transcription factor q21.2 Seq+ 34556 ChimerSeq STARFusion TCGA_RNA-Seq NDRG1-SNTB1 NDRG1 chr8 134292475 - SNTB1 chr8 121706148 - Exonic hg19 LUAD TCGA-05-4422-01A 26 106 Out-of-frame Intra-chr q24.22 Tumor suppressor gene q24.12 Seq+ 34557 ChimerSeq STARFusion TCGA_RNA-Seq NDRG1-SNTB1 NDRG1 chr8 134292478 - SNTB1 chr8 121706151 - Exonic hg19 LUAD TCGA-05-4422-01A 16 106 Out-of-frame Intra-chr q24.22 Tumor suppressor gene q24.12 Seq+ 34558 ChimerSeq STARFusion TCGA_RNA-Seq EXT1-OC90 EXT1 chr8 118830674 - OC90 chr8 133045411 - Exonic hg19 LUAD TCGA-05-4422-01A 4 21 Out-of-frame Intra-chr q24.11 Oncogene Tumor suppressor gene q24.22 Seq+ 34559 ChimerSeq STARFusion TCGA_RNA-Seq KHDRBS3-EFR3A KHDRBS3 chr8 136470197 + EFR3A chr8 133008653 + Exonic hg19 LUAD TCGA-05-4422-01A 2 8 In-Frame Intra-chr q24.23 q24.22 Seq+ 34560 ChimerSeq STARFusion TCGA_RNA-Seq CCBP2-KRBOX1 CCBP2 chr3 42861203 + KRBOX1 chr3 42980342 + Exonic hg19 LUAD TCGA-05-4422-01A 2 1 5'UTR-5'UTR Intra-chr p22.1 Seq+ 34561 ChimerSeq STARFusion TCGA_RNA-Seq ZNF343-PRPSAP2 ZNF343 chr20 2489527 - PRPSAP2 chr17 18827227 + Exonic hg19 LUAD TCGA-97-A4LX-01A 10 5 5'UTR-CDS Inter-chr p13 Transcription factor p11.2 Seq+ 34562 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-MAP2K4 TAOK1 chr17 27818883 + MAP2K4 chr17 12043156 + Exonic hg19 LUAD TCGA-97-A4LX-01A 2 12 Out-of-frame Intra-chr q11.2 p12 STE:STE7 Oncogene Tumor suppressor gene Seq+ 34563 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-ELK2AP GAS6 chr13 114525072 - ELK2AP chr14 106136184 - Exonic hg19 LUAD TCGA-97-A4LX-01A 4 0 Out-of-frame Inter-chr q34 Oncogene 34564 ChimerSeq STARFusion TCGA_RNA-Seq SFTPB-SIPA1L3 SFTPB chr2 85892728 - SIPA1L3 chr19 38697883 + Exonic hg19 LUAD TCGA-97-7546-01A 3 1 Out-of-frame Inter-chr p11.2 q13.13 34565 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN3-SAT1 TSPAN3 chr15 77337273 - SAT1 chrX 23802461 + Exonic hg19 LUAD TCGA-97-7546-01A 3 1 Out-of-frame Inter-chr q24.3 p22.11 34566 ChimerSeq STARFusion TCGA_RNA-Seq CWC25-B4GALNT2 CWC25 chr17 36977154 - B4GALNT2 chr17 47218609 + Exonic hg19 LUAD TCGA-50-5066-02A 13 88 In-Frame Intra-chr q12 q21.32 Seq+ 34567 ChimerSeq STARFusion TCGA_RNA-Seq VPS53-NXN VPS53 chr17 613773 - NXN chr17 729318 - Exonic hg19 LUAD TCGA-50-5066-02A 6 24 In-Frame Intra-chr Tumor suppressor gene p13.3 34568 ChimerSeq STARFusion TCGA_RNA-Seq TNFRSF10D-LOC286059 TNFRSF10D chr8 22995155 - LOC286059 chr8 22939120 + Exonic hg19 LUAD TCGA-50-5066-02A 7 11 Out-of-frame Intra-chr p21.3 34569 ChimerSeq STARFusion TCGA_RNA-Seq ACO2-FLJ43681 ACO2 chr22 41904053 + FLJ43681 chr17 81187693 + Exonic hg19 LUAD TCGA-50-5066-02A 9 0 5'UTR-5'UTR Inter-chr q13.2 Seq+ 34570 ChimerSeq STARFusion TCGA_RNA-Seq S100PBP-YARS S100PBP chr1 33295668 + YARS chr1 33263444 - Exonic hg19 LUAD TCGA-50-5066-02A 3 18 Out-of-frame Intra-chr p35.1 p35.1 34571 ChimerSeq STARFusion TCGA_RNA-Seq LOC286059-TNFRSF10D LOC286059 chr8 22940218 + TNFRSF10D chr8 22993936 - Exonic hg19 LUAD TCGA-50-5066-02A 3 13 Out-of-frame Intra-chr p21.3 34572 ChimerSeq STARFusion TCGA_RNA-Seq DOPEY2-RNA45S5 DOPEY2 chr21 37617496 + RNA45S5 chrUn_gl000220 115677 + Exonic hg19 LUAD TCGA-50-5066-02A 3 4 Out-of-frame Inter-chr q22.12 34573 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-LETM2 ZFAND3 chr6 37787792 + LETM2 chr8 38245468 + Exonic hg19 LUAD TCGA-50-5066-02A 2 1 CDS-5'UTR Inter-chr p21.2 p11.23 34574 ChimerSeq STARFusion TCGA_RNA-Seq THRAP3-CAPZB THRAP3 chr1 36690106 + CAPZB chr1 19705147 - Exonic hg19 LUAD TCGA-49-4507-01A 89 287 5'UTR-CDS Intra-chr p34.3 p36.13 Seq+ 34575 ChimerSeq STARFusion TCGA_RNA-Seq AP3D1-REXO1 AP3D1 chr19 2108686 - REXO1 chr19 1816812 - Exonic hg19 LUAD TCGA-49-4507-01A 34 82 In-Frame Intra-chr p13.3 p13.3 Seq+ 34576 ChimerSeq STARFusion TCGA_RNA-Seq PRPF6-DNAJC5 PRPF6 chr20 62626835 + DNAJC5 chr20 62562204 + Exonic hg19 LUAD TCGA-91-7771-01A 10 54 In-Frame Intra-chr q13.33 q13.33 Seq+ 34577 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT1-BAG1 B4GALT1 chr9 33166756 - BAG1 chr9 33262828 - Exonic hg19 LUAD TCGA-91-7771-01A 3 65 In-Frame Intra-chr p21.1 p13.3 Seq+ 34578 ChimerSeq STARFusion TCGA_RNA-Seq WARS-C8orf12 WARS chr14 100835424 - C8orf12 chr8 11291429 + Exonic hg19 LUAD TCGA-91-7771-01A 6 25 CDS-5'UTR Inter-chr q32.2 Seq+ 34579 ChimerSeq STARFusion TCGA_RNA-Seq ARMC1-SPAG11B ARMC1 chr8 66525479 - SPAG11B chr8 7308721 - Exonic hg19 LUAD TCGA-91-7771-01A 4 25 Out-of-frame Intra-chr q13.1 p23.1 Seq+ 34580 ChimerSeq STARFusion TCGA_RNA-Seq ARMC1-SPAG11B ARMC1 chr8 66525479 - SPAG11B chr8 7308422 - Exonic hg19 LUAD TCGA-91-7771-01A 3 25 Out-of-frame Intra-chr q13.1 p23.1 Seq+ 34581 ChimerSeq STARFusion TCGA_RNA-Seq OXSR1-CTDSPL OXSR1 chr3 38263178 + CTDSPL chr3 37998602 + Exonic hg19 LUAD TCGA-91-7771-01A 5 7 In-Frame Intra-chr p22.2 p22.2 Tumor suppressor gene Seq+ 34582 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KC1-TFPI RPS6KC1 chr1 213251158 + TFPI chr2 188368497 - Exonic hg19 LUAD TCGA-91-7771-01A 5 6 CDS-5'UTR Inter-chr q32.3 q32.1 Seq+ 34583 ChimerSeq STARFusion TCGA_RNA-Seq ASXL1-TM9SF4 ASXL1 chr20 30956926 + TM9SF4 chr20 30720816 + Exonic hg19 LUAD TCGA-91-7771-01A 3 11 In-Frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 34584 ChimerSeq STARFusion TCGA_RNA-Seq MECOM-FRMD5 MECOM chr3 168810746 - FRMD5 chr15 44180464 - Exonic hg19 LUAD TCGA-91-7771-01A 3 8 Out-of-frame Inter-chr q26.2 Transcription factor q15.3 Seq+ 34585 ChimerSeq STARFusion TCGA_RNA-Seq MAP1LC3A-ASIP MAP1LC3A chr20 33134720 + ASIP chr20 32848171 + Exonic hg19 LUAD TCGA-91-7771-01A 2 2 5'UTR-5'UTR Intra-chr q11.22 q11.22 Seq+ 34586 ChimerSeq STARFusion TCGA_RNA-Seq C3orf27-SCNM1 C3orf27 chr3 128294109 - SCNM1 chr1 151138947 + Exonic hg19 LUAD TCGA-55-7281-01A 2 0 5'UTR-5'UTR Inter-chr q21.3 34587 ChimerSeq STARFusion TCGA_RNA-Seq STAT4-CXCR7 STAT4 chr2 192011339 - CXCR7 chr2 237489083 + Exonic hg19 LUAD TCGA-05-4398-01A 32 156 CDS-5'UTR Intra-chr q32.3 Transcription factor Seq+ 34588 ChimerSeq STARFusion TCGA_RNA-Seq SYPL1-AKR1D1 SYPL1 chr7 105738136 - AKR1D1 chr7 137782612 + Exonic hg19 LUAD TCGA-05-4398-01A 40 117 In-Frame Intra-chr q22.3 q33 Seq+ 34589 ChimerSeq STARFusion TCGA_RNA-Seq KDM5C-RALBP1 KDM5C chrX 53254341 - RALBP1 chr18 9524592 + Exonic hg19 LUAD TCGA-05-4398-01A 24 4 5'UTR-CDS Inter-chr p11.22 Oncogene p11.22 34590 ChimerSeq STARFusion TCGA_RNA-Seq ATP2B4-ERBB4 ATP2B4 chr1 203596347 + ERBB4 chr2 212989628 - Exonic hg19 LUAD TCGA-05-4398-01A 7 33 5'UTR-CDS Inter-chr q32.1 q34 Oncogene Tumor suppressor gene Seq+ 34591 ChimerSeq STARFusion TCGA_RNA-Seq EXOC4-PTAFR EXOC4 chr7 133314894 + PTAFR chr1 28477570 - Exonic hg19 LUAD TCGA-05-4398-01A 6 18 CDS-5'UTR Inter-chr q33 p35.3 Seq+ 34592 ChimerSeq STARFusion TCGA_RNA-Seq CLPTM1-RPS5 CLPTM1 chr19 45458724 + RPS5 chr19 58904726 + Exonic hg19 LUAD TCGA-05-4398-01A 3 14 CDS-5'UTR Intra-chr q13.32 q13.43 Seq+ 34593 ChimerSeq STARFusion TCGA_RNA-Seq YY1AP1-GON4L YY1AP1 chr1 155644801 - GON4L chr1 155753880 - Exonic hg19 LUAD TCGA-44-5645-01A 3 25 In-Frame Intra-chr q22 q22 34594 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF5-CFDP1 RAPGEF5 chr7 22232985 - CFDP1 chr16 75339080 - Exonic hg19 LUAD TCGA-44-5645-01A 4 12 Out-of-frame Inter-chr p15.3 q23.1 Seq+ 34595 ChimerSeq STARFusion TCGA_RNA-Seq DYNC1H1-RNA45S5 DYNC1H1 chr14 102452719 + RNA45S5 chrUn_gl000220 114052 + Exonic hg19 LUAD TCGA-44-5645-01A 4 3 Out-of-frame Inter-chr q32.31 34596 ChimerSeq STARFusion TCGA_RNA-Seq VAC14-HYDIN VAC14 chr16 70834700 - HYDIN chr16 70913659 - Exonic hg19 LUAD TCGA-44-5645-01A 3 6 Out-of-frame Intra-chr q22.2 Seq+ 34597 ChimerSeq STARFusion TCGA_RNA-Seq RFWD3-STK31 RFWD3 chr16 74694830 - STK31 chr7 23766860 + Exonic hg19 LUAD TCGA-44-5645-01A 2 8 Out-of-frame Inter-chr q23.1 p15.3 Seq+ 34598 ChimerSeq STARFusion TCGA_RNA-Seq MRPS6-SLC5A3 MRPS6 chr21 35497780 + SLC5A3 chr21 35475134 + Exonic hg19 LUAD TCGA-44-5645-01A 3 1 CDS-3'UTR Intra-chr q22.11 q22.11 34599 ChimerSeq STARFusion TCGA_RNA-Seq TMTC1-ERGIC2 TMTC1 chr12 29904599 - ERGIC2 chr12 29524603 - Exonic hg19 LUAD TCGA-05-4250-01A 6 19 CDS-5'UTR Intra-chr p11.22 p11.22 Seq+ 34600 ChimerSeq STARFusion TCGA_RNA-Seq YWHAQ-KRT8 YWHAQ chr2 9770609 - KRT8 chr12 53292560 - Exonic hg19 LUAD TCGA-05-4250-01A 3 1 Out-of-frame Inter-chr p25.1 q13.13 34601 ChimerSeq STARFusion TCGA_RNA-Seq DVL1-MXRA8 DVL1 chr1 1284276 - MXRA8 chr1 1292084 - Exonic hg19 LUAD TCGA-05-4250-01A 2 2 Out-of-frame Intra-chr p36.33 p36.33 34602 ChimerSeq STARFusion TCGA_RNA-Seq AXL-DPRX AXL chr19 41737203 + DPRX chr19 54135316 + Exonic hg19 LUAD TCGA-86-8073-01A 4 2 CDS-5'UTR Intra-chr q13.2 TK:Axl Oncogene q13.42 Transcription factor 34603 ChimerSeq STARFusion TCGA_RNA-Seq CTSH-RASGRF1 CTSH chr15 79237233 - RASGRF1 chr15 79320201 - Exonic hg19 LUAD TCGA-86-8073-01A 2 2 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 34604 ChimerSeq STARFusion TCGA_RNA-Seq EAPP-SNX6 EAPP chr14 35002650 - SNX6 chr14 35037219 - Exonic hg19 LUAD TCGA-78-7155-01A 18 37 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 34605 ChimerSeq STARFusion TCGA_RNA-Seq SEC24A-DDX46 SEC24A chr5 134002686 + DDX46 chr5 134113264 + Exonic hg19 LUAD TCGA-78-7155-01A 12 34 In-Frame Intra-chr q31.1 q31.1 Seq+ 34606 ChimerSeq STARFusion TCGA_RNA-Seq EFCAB2-SDCCAG8 EFCAB2 chr1 245222760 + SDCCAG8 chr1 243449574 + Exonic hg19 LUAD TCGA-78-7155-01A 2 12 In-Frame Intra-chr q44 Seq+ 34607 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L5-LOC150568 EPB41L5 chr2 120889291 + LOC150568 chr2 105122324 + Exonic hg19 LUAD TCGA-78-7155-01A 2 10 CDS-5'UTR Intra-chr q14.2 34608 ChimerSeq STARFusion TCGA_RNA-Seq CDK13-AMPH CDK13 chr7 40041630 + AMPH chr7 38574611 - Exonic hg19 LUAD TCGA-78-7155-01A 2 2 Out-of-frame Intra-chr p14.1 p14.1 Seq+ 34609 ChimerSeq STARFusion TCGA_RNA-Seq MARK2-DLAT MARK2 chr11 63607032 + DLAT chr11 111907997 + Exonic hg19 LUAD TCGA-67-3774-01A 3 42 Out-of-frame Intra-chr q13.1 CAMK:CAMKL q23.1 Seq+ 34610 ChimerSeq STARFusion TCGA_RNA-Seq MARK2-DLAT MARK2 chr11 63607032 + DLAT chr11 111909968 + Exonic hg19 LUAD TCGA-67-3774-01A 2 42 In-Frame Intra-chr q13.1 CAMK:CAMKL q23.1 Seq+ 34611 ChimerSeq STARFusion TCGA_RNA-Seq MRPS22-SLC9A9 MRPS22 chr3 139071634 + SLC9A9 chr3 143412149 - Exonic hg19 LUAD TCGA-67-3774-01A 6 8 In-Frame Intra-chr q23 q24 Seq+ 34612 ChimerSeq STARFusion TCGA_RNA-Seq PDE3A-CCT2 PDE3A chr12 20523178 + CCT2 chr12 69985839 + Exonic hg19 LUAD TCGA-67-3774-01A 6 3 Out-of-frame Intra-chr p12.2 q15 Seq+ 34613 ChimerSeq STARFusion TCGA_RNA-Seq TOP2B-GADL1 TOP2B chr3 25646251 - GADL1 chr3 30885958 - Exonic hg19 LUAD TCGA-67-3774-01A 2 4 Out-of-frame Intra-chr p24.2 p23 Seq+ 34614 ChimerSeq STARFusion TCGA_RNA-Seq USP32-APPBP2 USP32 chr17 58372044 - APPBP2 chr17 58577848 - Exonic hg19 LUAD TCGA-75-5126-01A 5 14 In-Frame Intra-chr q23.2 q23.2 Seq+ 34615 ChimerSeq STARFusion TCGA_RNA-Seq MRPS6-SLC5A3 MRPS6 chr21 35497780 + SLC5A3 chr21 35475134 + Exonic hg19 LUAD TCGA-44-4112-01A 9 8 CDS-3'UTR Intra-chr q22.11 q22.11 34616 ChimerSeq STARFusion TCGA_RNA-Seq FBXO34-LGALS3 FBXO34 chr14 55738255 + LGALS3 chr14 55606993 + Exonic hg19 LUAD TCGA-44-4112-01A 7 11 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 34617 ChimerSeq STARFusion TCGA_RNA-Seq CDC42SE2-LYRM7 CDC42SE2 chr5 130599859 + LYRM7 chr5 130515788 + Exonic hg19 LUAD TCGA-44-4112-01A 3 2 5'UTR-CDS Intra-chr q31.1 q23.3 Seq+ 34618 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-FGFR1 WHSC1L1 chr8 38239317 - FGFR1 chr8 38315052 - Exonic hg19 LUAD TCGA-44-4112-01A 2 0 5'UTR-5'UTR Intra-chr p11.23 Tumor suppressor gene p11.23 TK:FGFR Oncogene Seq+ 34619 ChimerSeq STARFusion TCGA_RNA-Seq KIF5B-MET KIF5B chr10 32306071 - MET chr7 116411903 + Exonic hg19 LUAD TCGA-93-A4JN-01A 6 43 In-Frame Inter-chr p11.22 q31.2 TK:Met Oncogene KB Pub Seq+ 34620 ChimerSeq STARFusion TCGA_RNA-Seq CIC-KLK11 CIC chr19 42793558 + KLK11 chr19 51528922 - Exonic hg19 LUAD TCGA-93-A4JN-01A 3 21 In-Frame Intra-chr q13.2 Oncogene Tumor suppressor gene Transcription factor q13.41 Seq+ 34621 ChimerSeq STARFusion TCGA_RNA-Seq EZR-ROS1 EZR chr6 159191796 - ROS1 chr6 117645578 - Exonic hg19 LUAD TCGA-55-6986-01A 58 249 In-Frame Intra-chr q25.3 q22.1 Oncogene KB Pub Seq+ 34622 ChimerSeq STARFusion TCGA_RNA-Seq DNM1L-ITPR2 DNM1L chr12 32832399 + ITPR2 chr12 26589279 - Exonic hg19 LUAD TCGA-55-6986-01A 5 17 Out-of-frame Intra-chr p11.21 p11.23 Seq+ 34623 ChimerSeq STARFusion TCGA_RNA-Seq PACSIN2-TTLL1 PACSIN2 chr22 43308027 - TTLL1 chr22 43435911 - Exonic hg19 LUAD TCGA-50-6597-01A 31 106 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 34624 ChimerSeq STARFusion TCGA_RNA-Seq ST7-ASZ1 ST7 chr7 116593745 + ASZ1 chr7 117024914 - Exonic hg19 LUAD TCGA-86-8672-01A 8 60 Out-of-frame Intra-chr q31.2 Tumor suppressor gene q31.2 Seq+ 34625 ChimerSeq STARFusion TCGA_RNA-Seq ST7-ASZ1 ST7 chr7 116593745 + ASZ1 chr7 117025863 - Exonic hg19 LUAD TCGA-86-8672-01A 7 60 Out-of-frame Intra-chr q31.2 Tumor suppressor gene q31.2 Seq+ 34626 ChimerSeq STARFusion TCGA_RNA-Seq ABLIM1-LOC100507412 ABLIM1 chr10 116227940 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LUAD TCGA-44-7670-01A 31 167 CDS-5'UTR Inter-chr q25.3 34627 ChimerSeq STARFusion TCGA_RNA-Seq ASXL2-SRBD1 ASXL2 chr2 26101035 - SRBD1 chr2 45715470 - Exonic hg19 LUAD TCGA-44-7670-01A 26 93 Out-of-frame Intra-chr p23.3 p21 Seq+ 34628 ChimerSeq STARFusion TCGA_RNA-Seq CPNE8-CADM2 CPNE8 chr12 39299239 - CADM2 chr3 85851197 + Exonic hg19 LUAD TCGA-44-7670-01A 16 73 Out-of-frame Inter-chr q12 p12.1 Tumor suppressor gene Seq+ 34629 ChimerSeq STARFusion TCGA_RNA-Seq ASXL2-SRBD1 ASXL2 chr2 26101035 - SRBD1 chr2 45647033 - Exonic hg19 LUAD TCGA-44-7670-01A 10 93 In-Frame Intra-chr p23.3 p21 Seq+ 34630 ChimerSeq STARFusion TCGA_RNA-Seq ASXL2-SRBD1 ASXL2 chr2 26101035 - SRBD1 chr2 45704214 - Exonic hg19 LUAD TCGA-44-7670-01A 8 93 Out-of-frame Intra-chr p23.3 p21 Seq+ 34631 ChimerSeq STARFusion TCGA_RNA-Seq C6orf195-TREML3P C6orf195 chr6 2633839 - TREML3P chr6 41183557 - Exonic hg19 LUAD TCGA-44-7670-01A 2 101 5'UTR-3'UTR Intra-chr p21.1 34632 ChimerSeq STARFusion TCGA_RNA-Seq C6orf195-TREML3P C6orf195 chr6 2633839 - TREML3P chr6 41177468 - Exonic hg19 LUAD TCGA-44-7670-01A 2 101 5'UTR-3'UTR Intra-chr p21.1 34633 ChimerSeq STARFusion TCGA_RNA-Seq SCMH1-CUL3 SCMH1 chr1 41707731 - CUL3 chr2 225343062 - Exonic hg19 LUAD TCGA-44-7670-01A 9 64 5'UTR-CDS Inter-chr p34.2 Transcription factor q36.2 Seq+ 34634 ChimerSeq STARFusion TCGA_RNA-Seq SCMH1-CUL3 SCMH1 chr1 41707731 - CUL3 chr2 225346795 - Exonic hg19 LUAD TCGA-44-7670-01A 6 64 5'UTR-CDS Inter-chr p34.2 Transcription factor q36.2 Seq+ 34635 ChimerSeq STARFusion TCGA_RNA-Seq FRMD6-SCFD1 FRMD6 chr14 52118714 + SCFD1 chr14 31163979 + Exonic hg19 LUAD TCGA-44-7670-01A 9 47 5'UTR-5'UTR Intra-chr q22.1 q12 Seq+ 34636 ChimerSeq STARFusion TCGA_RNA-Seq MTMR12-ZFR MTMR12 chr5 32312864 - ZFR chr5 32364381 - Exonic hg19 LUAD TCGA-44-7670-01A 7 55 In-Frame Intra-chr p13.3 p13.3 Seq+ 34637 ChimerSeq STARFusion TCGA_RNA-Seq CDK6-STXBP6 CDK6 chr7 92462405 - STXBP6 chr14 25281938 - Exonic hg19 LUAD TCGA-44-7670-01A 6 29 Out-of-frame Inter-chr q21.2 CMGC:CDK Oncogene Tumor suppressor gene q12 Seq+ 34638 ChimerSeq STARFusion TCGA_RNA-Seq FAM53B-KCNN1 FAM53B chr10 126370176 - KCNN1 chr19 18099224 + Exonic hg19 LUAD TCGA-44-7670-01A 4 35 In-Frame Inter-chr q26.13 p13.11 Seq+ 34639 ChimerSeq STARFusion TCGA_RNA-Seq WWOX-VAT1L WWOX chr16 78466649 + VAT1L chr16 78005747 + Exonic hg19 LUAD TCGA-44-7670-01A 4 4 In-Frame Intra-chr q23.1 Tumor suppressor gene q23.1 Seq+ 34640 ChimerSeq STARFusion TCGA_RNA-Seq SDCBP2-FKBP1A SDCBP2 chr20 1309729 - FKBP1A chr20 1356247 - Exonic hg19 LUAD TCGA-44-7670-01A 2 8 5'UTR-CDS Intra-chr p13 p13 34641 ChimerSeq STARFusion TCGA_RNA-Seq SDCBP2-FKBP1A SDCBP2 chr20 1306474 - FKBP1A chr20 1356247 - Exonic hg19 LUAD TCGA-44-7670-01A 2 8 5'UTR-CDS Intra-chr p13 p13 34642 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN3-CHRNA3 TSPAN3 chr15 77339131 - CHRNA3 chr15 78894606 - Exonic hg19 LUAD TCGA-NJ-A55O-01A 5 51 3'UTR-3'UTR Intra-chr q24.3 q25.1 Seq+ 34643 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN3-CHRNA3 TSPAN3 chr15 77344727 - CHRNA3 chr15 78894606 - Exonic hg19 LUAD TCGA-NJ-A55O-01A 2 51 Out-of-frame Intra-chr q24.3 q25.1 Seq+ 34644 ChimerSeq STARFusion TCGA_RNA-Seq MPG-NPRL3 MPG chr16 129699 + NPRL3 chr16 143323 - Exonic hg19 LUAD TCGA-NJ-A55O-01A 2 1 Out-of-frame Intra-chr p13.3 p13.3 34645 ChimerSeq STARFusion TCGA_RNA-Seq PLS3-CCDC64 PLS3 chrX 114874815 + CCDC64 chr12 120499514 + Exonic hg19 LUAD TCGA-05-4427-01A 60 377 In-Frame Inter-chr q23 Seq+ 34646 ChimerSeq STARFusion TCGA_RNA-Seq TUBD1-VMP1 TUBD1 chr17 57941025 - VMP1 chr17 57816198 + Exonic hg19 LUAD TCGA-05-4427-01A 49 5 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 34647 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-LOC100506844 CTDSP2 chr12 58240155 - LOC100506844 chr12 58329336 - Exonic hg19 LUAD TCGA-05-4427-01A 24 42 CDS-3'UTR Intra-chr q14.1 34648 ChimerSeq STARFusion TCGA_RNA-Seq GTF2E2-RBPMS GTF2E2 chr8 30510950 - RBPMS chr8 30402011 + Exonic hg19 LUAD TCGA-05-4427-01A 16 36 In-Frame Intra-chr p12 p12 Seq+ 34649 ChimerSeq STARFusion TCGA_RNA-Seq CDH1-CDKL3 CDH1 chr16 68856128 + CDKL3 chr5 133644157 - Exonic hg19 LUAD TCGA-05-4427-01A 11 54 Out-of-frame Inter-chr q22.1 Oncogene Tumor suppressor gene q31.1 CMGC:CDKL Seq+ 34650 ChimerSeq STARFusion TCGA_RNA-Seq SWAP70-WEE1 SWAP70 chr11 9685825 + WEE1 chr11 9597435 + Exonic hg19 LUAD TCGA-05-4427-01A 5 62 In-Frame Intra-chr p15.4 p15.4 Seq+ 34651 ChimerSeq STARFusion TCGA_RNA-Seq GSE1-NOTCH3 GSE1 chr16 85647004 + NOTCH3 chr19 15276902 - Exonic hg19 LUAD TCGA-05-4427-01A 8 38 Out-of-frame Inter-chr q24.1 p13.12 Oncogene Tumor suppressor gene Seq+ 34652 ChimerSeq STARFusion TCGA_RNA-Seq CDH1-CDKL3 CDH1 chr16 68856128 + CDKL3 chr5 133642393 - Exonic hg19 LUAD TCGA-05-4427-01A 2 54 Out-of-frame Inter-chr q22.1 Oncogene Tumor suppressor gene q31.1 CMGC:CDKL Seq+ 34653 ChimerSeq STARFusion TCGA_RNA-Seq IL6ST-ANKRD55 IL6ST chr5 55272043 - ANKRD55 chr5 55412609 - Exonic hg19 LUAD TCGA-05-4427-01A 3 50 Out-of-frame Intra-chr q11.2 Oncogene q11.2 Seq+ 34654 ChimerSeq STARFusion TCGA_RNA-Seq PPP2CA-CDH3 PPP2CA chr5 133561451 - CDH3 chr16 68710288 + Exonic hg19 LUAD TCGA-05-4427-01A 2 33 Out-of-frame Inter-chr q31.1 Tumor suppressor gene q22.1 Seq+ 34655 ChimerSeq STARFusion TCGA_RNA-Seq SPRED1-TMCO5A SPRED1 chr15 38545418 + TMCO5A chr15 38227458 + Exonic hg19 LUAD TCGA-05-4427-01A 4 20 CDS-5'UTR Intra-chr q14 q14 Seq+ 34656 ChimerSeq STARFusion TCGA_RNA-Seq PARD6B-LOC284751 PARD6B chr20 49354616 + LOC284751 chr20 48914693 + Exonic hg19 LUAD TCGA-05-4427-01A 4 17 CDS-5'UTR Intra-chr q13.13 34657 ChimerSeq STARFusion TCGA_RNA-Seq SPRED1-TMCO5A SPRED1 chr15 38545418 + TMCO5A chr15 38228515 + Exonic hg19 LUAD TCGA-05-4427-01A 3 20 CDS-5'UTR Intra-chr q14 q14 Seq+ 34658 ChimerSeq STARFusion TCGA_RNA-Seq DCBLD2-ST3GAL6 DCBLD2 chr3 98600384 - ST3GAL6 chr3 98487274 + Exonic hg19 LUAD TCGA-05-4427-01A 3 16 CDS-5'UTR Intra-chr q12.1 q12.1 Seq+ 34659 ChimerSeq STARFusion TCGA_RNA-Seq PARD6B-LOC284751 PARD6B chr20 49354616 + LOC284751 chr20 48928342 + Exonic hg19 LUAD TCGA-05-4427-01A 2 17 CDS-5'UTR Intra-chr q13.13 34660 ChimerSeq STARFusion TCGA_RNA-Seq DCBLD2-ST3GAL6 DCBLD2 chr3 98600384 - ST3GAL6 chr3 98475213 + Exonic hg19 LUAD TCGA-05-4427-01A 2 16 CDS-5'UTR Intra-chr q12.1 q12.1 Seq+ 34661 ChimerSeq STARFusion TCGA_RNA-Seq SFMBT1-GNL3 SFMBT1 chr3 53079832 - GNL3 chr3 52720785 + Exonic hg19 LUAD TCGA-05-4427-01A 2 13 5'UTR-5'UTR Intra-chr p21.1 p21.1 Seq+ 34662 ChimerSeq STARFusion TCGA_RNA-Seq ASH1L-CCT3 ASH1L chr1 155447677 - CCT3 chr1 156282012 - Exonic hg19 LUAD TCGA-05-4427-01A 3 8 Out-of-frame Intra-chr q22 Transcription factor q22 Seq+ 34663 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT1-BAG1 B4GALT1 chr9 33166756 - BAG1 chr9 33262828 - Exonic hg19 LUAD TCGA-05-4427-01A 2 5 In-Frame Intra-chr p21.1 p13.3 Seq+ 34664 ChimerSeq STARFusion TCGA_RNA-Seq RGS3-BSPRY RGS3 chr9 116226161 + BSPRY chr9 116130539 + Exonic hg19 LUAD TCGA-05-4427-01A 2 5 Out-of-frame Intra-chr q32 q32 Seq+ 34665 ChimerSeq STARFusion TCGA_RNA-Seq ITCH-NOTCH2NL ITCH chr20 32996598 + NOTCH2NL chr1 145248813 + Exonic hg19 LUAD TCGA-05-4427-01A 2 2 CDS-5'UTR Inter-chr q11.22 q21.1 34666 ChimerSeq STARFusion TCGA_RNA-Seq UBE2D3-UNC13B UBE2D3 chr4 103747642 - UNC13B chr9 35258990 + Exonic hg19 LUAD TCGA-05-4427-01A 2 0 In-Frame Inter-chr q24 p13.3 34667 ChimerSeq STARFusion TCGA_RNA-Seq SUZ12P1-NF1 SUZ12P1 chr17 29086557 + NF1 chr17 29527440 + Exonic hg19 LUAD TCGA-44-4112-01B 5 2 5'UTR-CDS Intra-chr q11.2 q11.2 Oncogene Tumor suppressor gene 34668 ChimerSeq STARFusion TCGA_RNA-Seq FBXO34-LGALS3 FBXO34 chr14 55738255 + LGALS3 chr14 55606993 + Exonic hg19 LUAD TCGA-44-4112-01B 2 4 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 34669 ChimerSeq STARFusion TCGA_RNA-Seq CLSTN1-CTNNBIP1 CLSTN1 chr1 9809519 - CTNNBIP1 chr1 9910834 - Exonic hg19 LUAD TCGA-55-8616-01A 15 86 In-Frame Intra-chr p36.22 p36.22 Tumor suppressor gene Seq+ 34670 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57915656 + Exonic hg19 LUAD TCGA-73-4676-01A 15 21 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 34671 ChimerSeq STARFusion TCGA_RNA-Seq PPP3R1-SPATS2L PPP3R1 chr2 68444224 - SPATS2L chr2 201305372 + Exonic hg19 LUAD TCGA-73-4676-01A 6 23 In-Frame Intra-chr p14 q33.1 Seq+ 34672 ChimerSeq STARFusion TCGA_RNA-Seq PRIM2-ZNF451 PRIM2 chr6 57190843 + ZNF451 chr6 57025882 + Exonic hg19 LUAD TCGA-73-4676-01A 2 4 Out-of-frame Intra-chr p11.2 p12.1 Transcription factor 34673 ChimerSeq STARFusion TCGA_RNA-Seq LINS-CERS3 LINS chr15 101142322 - CERS3 chr15 101042055 - Exonic hg19 LUAD TCGA-62-8399-01A 4 1 5'UTR-5'UTR Intra-chr q26.3 Seq+ 34674 ChimerSeq STARFusion TCGA_RNA-Seq LINS-CERS3 LINS chr15 101142326 - CERS3 chr15 101042055 - Exonic hg19 LUAD TCGA-62-8399-01A 4 1 5'UTR-5'UTR Intra-chr q26.3 Seq+ 34675 ChimerSeq STARFusion TCGA_RNA-Seq SPOP-LIMA1 SPOP chr17 47696343 - LIMA1 chr12 50616268 - Exonic hg19 LUAD TCGA-55-A4DG-01A 8 28 In-Frame Inter-chr q21.33 Oncogene Tumor suppressor gene q13.12 Tumor suppressor gene Seq+ 34676 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP8-XRCC6 ARHGAP8 chr22 45182486 + XRCC6 chr22 42057335 + Exonic hg19 LUAD TCGA-55-A4DG-01A 3 46 In-Frame Intra-chr q13.31 q13.2 34677 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP8-XRCC6 ARHGAP8 chr22 45182486 + XRCC6 chr22 42054256 + Exonic hg19 LUAD TCGA-55-A4DG-01A 3 46 Out-of-frame Intra-chr q13.31 q13.2 34678 ChimerSeq STARFusion TCGA_RNA-Seq THUMPD2-VSNL1 THUMPD2 chr2 40006254 - VSNL1 chr2 17830677 + Exonic hg19 LUAD TCGA-55-A4DG-01A 3 14 In-Frame Intra-chr p22.1 p24.2 Tumor suppressor gene Seq+ 34679 ChimerSeq STARFusion TCGA_RNA-Seq LOC100133286-CBR3 LOC100133286 chr21 37442572 - CBR3 chr21 37507699 + Exonic hg19 LUAD TCGA-69-8253-01A 5 2 Out-of-frame Intra-chr q22.12 34680 ChimerSeq STARFusion TCGA_RNA-Seq SFTPB-SIPA1L3 SFTPB chr2 85892728 - SIPA1L3 chr19 38697883 + Exonic hg19 LUAD TCGA-69-8253-01A 4 1 Out-of-frame Inter-chr p11.2 q13.13 34681 ChimerSeq STARFusion TCGA_RNA-Seq GATC-SFTPB GATC chr12 120898961 + SFTPB chr2 85885668 - Exonic hg19 LUAD TCGA-69-8253-01A 3 4 Out-of-frame Inter-chr q24.31 p11.2 34682 ChimerSeq STARFusion TCGA_RNA-Seq GATC-SFTPB GATC chr12 120898970 + SFTPB chr2 85885659 - Exonic hg19 LUAD TCGA-69-8253-01A 3 4 Out-of-frame Inter-chr q24.31 p11.2 34683 ChimerSeq STARFusion TCGA_RNA-Seq TPD52L2-PDZRN4 TPD52L2 chr20 62500794 + PDZRN4 chr12 41900258 + Exonic hg19 LUAD TCGA-55-8087-01A 15 184 In-Frame Inter-chr q13.33 q12 Seq+ 34684 ChimerSeq STARFusion TCGA_RNA-Seq VPS53-ZZEF1 VPS53 chr17 600658 - ZZEF1 chr17 4027345 - Exonic hg19 LUAD TCGA-55-8087-01A 4 10 In-Frame Intra-chr Tumor suppressor gene p13.2 Seq+ 34685 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 LUAD TCGA-55-8087-01A 3 7 3'UTR-5'UTR Intra-chr q34 34686 ChimerSeq STARFusion TCGA_RNA-Seq PHOSPHO2-TMEM243 PHOSPHO2 chr2 170551757 + TMEM243 chr7 86828373 - Exonic hg19 LUAD TCGA-55-8087-01A 2 1 Out-of-frame Inter-chr q31.1 q21.12 34687 ChimerSeq STARFusion TCGA_RNA-Seq MARVELD2-WDR19 MARVELD2 chr5 68716358 + WDR19 chr4 39287107 + Exonic hg19 LUAD TCGA-62-A46V-01A 9 35 CDS-3'UTR Inter-chr q13.2 p14 Seq+ 34688 ChimerSeq STARFusion TCGA_RNA-Seq PVRL2-ZMAT2 PVRL2 chr19 45377735 + ZMAT2 chr5 140083503 + Exonic hg19 LUAD TCGA-62-A46V-01A 3 5 Out-of-frame Inter-chr q31.3 Seq+ 34689 ChimerSeq STARFusion TCGA_RNA-Seq IL4I1-LOC100507412 IL4I1 chr19 50430951 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LUAD TCGA-49-6744-01A 7 61 5'UTR-5'UTR Inter-chr q13.33 34690 ChimerSeq STARFusion TCGA_RNA-Seq NUP62-LOC100507412 NUP62 chr19 50430951 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LUAD TCGA-49-6744-01A 7 61 5'UTR-5'UTR Inter-chr q13.33 34691 ChimerSeq STARFusion TCGA_RNA-Seq PARD3B-WWOX PARD3B chr2 205990461 + WWOX chr16 79245505 + Exonic hg19 LUAD TCGA-49-6744-01A 8 8 In-Frame Inter-chr q33.3 q23.1 Tumor suppressor gene Seq+ 34692 ChimerSeq STARFusion TCGA_RNA-Seq ELF2-NDUFC1 ELF2 chr4 140005287 - NDUFC1 chr4 140217114 - Exonic hg19 LUAD TCGA-49-6744-01A 6 14 CDS-5'UTR Intra-chr q31.1 Transcription factor q31.1 34693 ChimerSeq STARFusion TCGA_RNA-Seq LNX1-SCFD2 LNX1 chr4 54373484 - SCFD2 chr4 53787037 - Exonic hg19 LUAD TCGA-49-6744-01A 4 10 In-Frame Intra-chr q12 q12 34694 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN14-VDAC2 TSPAN14 chr10 82249070 + VDAC2 chr10 76989402 + Exonic hg19 LUAD TCGA-44-2666-01A 2 1 In-Frame Intra-chr q23.1 q22.2 Seq+ 34695 ChimerSeq STARFusion TCGA_RNA-Seq CHID1-RRBP1 CHID1 chr11 910775 - RRBP1 chr20 17610606 - Exonic hg19 LUAD TCGA-49-4512-01A 4 2 5'UTR-CDS Inter-chr p15.5 p12.1 Seq+ 34696 ChimerSeq STARFusion TCGA_RNA-Seq RALY-CDK5RAP1 RALY chr20 32619410 + CDK5RAP1 chr20 31946929 - Exonic hg19 LUAD TCGA-49-4512-01A 2 1 5'UTR-CDS Intra-chr q11.22 q11.21 Seq+ 34697 ChimerSeq STARFusion TCGA_RNA-Seq MET-WNT2 MET chr7 116417523 + WNT2 chr7 116937930 - Exonic hg19 LUAD TCGA-44-7662-01A 123 456 Out-of-frame Intra-chr q31.2 TK:Met Oncogene q31.2 Seq+ 34698 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC6-ACSL5 ZDHHC6 chr10 114200292 - ACSL5 chr10 114168180 + Exonic hg19 LUAD TCGA-44-7662-01A 56 241 In-Frame Intra-chr q25.2 q25.2 Seq+ 34699 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC6-ACSL5 ZDHHC6 chr10 114201950 - ACSL5 chr10 114168180 + Exonic hg19 LUAD TCGA-44-7662-01A 21 241 In-Frame Intra-chr q25.2 q25.2 Seq+ 34700 ChimerSeq STARFusion TCGA_RNA-Seq ABR-CRK ABR chr17 994905 - CRK chr17 1340449 - Exonic hg19 LUAD TCGA-44-7662-01A 3 4 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 34701 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-DAND5 DNM2 chr19 10919256 + DAND5 chr19 13084203 + Exonic hg19 LUAD TCGA-44-7662-01A 2 8 In-Frame Intra-chr p13.2 p13.13 Seq+ 34702 ChimerSeq STARFusion TCGA_RNA-Seq ASXL2-RAB10 ASXL2 chr2 26101035 - RAB10 chr2 26321531 + Exonic hg19 LUAD TCGA-44-7662-01A 2 7 Out-of-frame Intra-chr p23.3 p23.3 34703 ChimerSeq STARFusion TCGA_RNA-Seq DCBLD2-TDRD3 DCBLD2 chr3 98619966 - TDRD3 chr13 61013822 + Exonic hg19 LUAD TCGA-44-7662-01A 2 1 Out-of-frame Inter-chr q12.1 q21.2 34704 ChimerSeq STARFusion TCGA_RNA-Seq AHNAK-STIP1 AHNAK chr11 62314132 - STIP1 chr11 63960550 + Exonic hg19 LUAD TCGA-97-7937-01A 12 54 5'UTR-CDS Intra-chr q12.3 Tumor suppressor gene q13.1 Seq+ 34705 ChimerSeq STARFusion TCGA_RNA-Seq RNF10-FBXO21 RNF10 chr12 120972771 + FBXO21 chr12 117615446 - Exonic hg19 LUAD TCGA-97-7937-01A 9 45 Out-of-frame Intra-chr q24.31 q24.22 Seq+ 34706 ChimerSeq STARFusion TCGA_RNA-Seq SMAD2-C10orf90 SMAD2 chr18 45394694 - C10orf90 chr10 128202508 - Exonic hg19 LUAD TCGA-97-7937-01A 6 41 In-Frame Inter-chr q21.1 Oncogene Tumor suppressor gene q26.2 Seq+ 34707 ChimerSeq STARFusion TCGA_RNA-Seq PER3-DNAJC11 PER3 chr1 7861251 + DNAJC11 chr1 6696306 - Exonic hg19 LUAD TCGA-97-7937-01A 7 35 Out-of-frame Intra-chr p36.23 p36.31 Tumor suppressor gene Seq+ 34708 ChimerSeq STARFusion TCGA_RNA-Seq LIN52-SYNE2 LIN52 chr14 74562688 + SYNE2 chr14 64675476 + Exonic hg19 LUAD TCGA-97-7937-01A 3 27 In-Frame Intra-chr q24.3 q23.2 Seq+ 34709 ChimerSeq STARFusion TCGA_RNA-Seq RLIM-PABPC1 RLIM chrX 73802937 - PABPC1 chr8 101717224 - Exonic hg19 LUAD TCGA-97-7937-01A 3 3 Out-of-frame Inter-chr q13.2 q22.3 34710 ChimerSeq STARFusion TCGA_RNA-Seq TASP1-SLC24A3 TASP1 chr20 13398095 - SLC24A3 chr20 19646508 + Exonic hg19 LUAD TCGA-97-7937-01A 3 2 In-Frame Intra-chr p12.1 p11.23 Seq+ 34711 ChimerSeq STARFusion TCGA_RNA-Seq GRB10-MAD1L1 GRB10 chr7 50823584 - MAD1L1 chr7 2188873 - Exonic hg19 LUAD TCGA-05-4415-01A 6 26 5'UTR-CDS Intra-chr p12.1 p22.3 Tumor suppressor gene Seq+ 34712 ChimerSeq STARFusion TCGA_RNA-Seq ERC1-VWF ERC1 chr12 1372331 + VWF chr12 6085426 - Exonic hg19 LUAD TCGA-05-4415-01A 5 27 In-Frame Intra-chr p13.31 Seq+ 34713 ChimerSeq STARFusion TCGA_RNA-Seq CCDC91-NTSR1 CCDC91 chr12 28544344 + NTSR1 chr20 61386037 + Exonic hg19 LUAD TCGA-05-4415-01A 3 13 In-Frame Inter-chr p11.22 q13.33 Seq+ 34714 ChimerSeq STARFusion TCGA_RNA-Seq URGCP-ABCA13 URGCP chr7 43927014 - ABCA13 chr7 48232556 + Exonic hg19 LUAD TCGA-05-4415-01A 2 6 Out-of-frame Intra-chr p13 p12.3 Seq+ 34715 ChimerSeq STARFusion TCGA_RNA-Seq NME2-CCL4L1 NME2 chr17 49245704 + CCL4L1 chr17 34539178 + Exonic hg19 LUAD TCGA-97-7554-01A 10 35 CDS-5'UTR Intra-chr q21.33 Transcription factor 34716 ChimerSeq STARFusion TCGA_RNA-Seq NME2-CCL4L2 NME2 chr17 49245704 + CCL4L2 chr17 34539178 + Exonic hg19 LUAD TCGA-97-7554-01A 10 35 CDS-5'UTR Intra-chr q21.33 Transcription factor q12 Seq+ 34717 ChimerSeq STARFusion TCGA_RNA-Seq VTI1A-C10orf90 VTI1A chr10 114298089 + C10orf90 chr10 128202508 - Exonic hg19 LUAD TCGA-97-7554-01A 5 13 In-Frame Intra-chr q25.2 q26.2 Seq+ 34718 ChimerSeq STARFusion TCGA_RNA-Seq EPS8-GYS2 EPS8 chr12 15942095 - GYS2 chr12 21733457 - Exonic hg19 LUAD TCGA-97-7554-01A 2 15 5'UTR-CDS Intra-chr p12.3 p12.1 Seq+ 34719 ChimerSeq STARFusion TCGA_RNA-Seq SNX7-DPYD SNX7 chr1 99203945 + DPYD chr1 98348930 - Exonic hg19 LUAD TCGA-97-7554-01A 2 2 In-Frame Intra-chr p21.3 p21.3 Oncogene 34720 ChimerSeq STARFusion TCGA_RNA-Seq LZTS2-ALDOA LZTS2 chr10 102756991 + ALDOA chr16 30078555 + Exonic hg19 LUAD TCGA-97-7554-01A 2 0 5'UTR-5'UTR Inter-chr q24.31 p11.2 34721 ChimerSeq STARFusion TCGA_RNA-Seq LIMCH1-LOC100506990 LIMCH1 chr4 41362953 + LOC100506990 chr8 12388452 + Exonic hg19 LUAD TCGA-50-7109-01A 5 15 CDS-5'UTR Inter-chr p13 34722 ChimerSeq STARFusion TCGA_RNA-Seq LOC100129917-CPLX1 LOC100129917 chr4 775560 - CPLX1 chr4 780486 - Exonic hg19 LUAD TCGA-NJ-A4YP-01A 13 32 3'UTR-CDS Intra-chr p16.3 34723 ChimerSeq STARFusion TCGA_RNA-Seq TMEM241-TEX101 TMEM241 chr18 20936558 - TEX101 chr19 43906918 + Exonic hg19 LUAD TCGA-NJ-A4YP-01A 2 0 CDS-5'UTR Inter-chr q11.2 q13.31 34724 ChimerSeq STARFusion TCGA_RNA-Seq ATP1B1-RCSD1 ATP1B1 chr1 169099328 + RCSD1 chr1 167653137 + Exonic hg19 LUAD TCGA-86-8281-01A 121 456 In-Frame Intra-chr q24.2 q24.2 Seq+ 34725 ChimerSeq STARFusion TCGA_RNA-Seq LOC100133286-CBR3 LOC100133286 chr21 37442572 - CBR3 chr21 37507699 + Exonic hg19 LUAD TCGA-86-8281-01A 7 2 Out-of-frame Intra-chr q22.12 34726 ChimerSeq STARFusion TCGA_RNA-Seq LOC100133286-CBR3 LOC100133286 chr21 37442584 - CBR3 chr21 37507706 + Exonic hg19 LUAD TCGA-86-8281-01A 3 2 Out-of-frame Intra-chr q22.12 34727 ChimerSeq STARFusion TCGA_RNA-Seq TIA1-BCL11A TIA1 chr2 70475537 - BCL11A chr2 60743653 - Exonic hg19 LUAD TCGA-64-1676-01A 3 41 Out-of-frame Intra-chr p13.3 p16.1 Oncogene Transcription factor Seq+ 34728 ChimerSeq STARFusion TCGA_RNA-Seq TIA1-BCL11A TIA1 chr2 70475537 - BCL11A chr2 60695968 - Exonic hg19 LUAD TCGA-64-1676-01A 2 41 Out-of-frame Intra-chr p13.3 p16.1 Oncogene Transcription factor Seq+ 34729 ChimerSeq STARFusion TCGA_RNA-Seq CHD2-LOC100507217 CHD2 chr15 93444529 + LOC100507217 chr15 93435234 + Exonic hg19 LUAD TCGA-64-1676-01A 2 0 CDS-5'UTR Intra-chr q26.1 34730 ChimerSeq STARFusion TCGA_RNA-Seq HMBS-FOXR1 HMBS chr11 118955776 + FOXR1 chr11 118849492 + Exonic hg19 LUAD TCGA-99-7458-01A 8 39 Out-of-frame Intra-chr Transcription factor Seq+ 34731 ChimerSeq STARFusion TCGA_RNA-Seq PAX9-SLC25A21 PAX9 chr14 37135806 + SLC25A21 chr14 37153085 - Exonic hg19 LUAD TCGA-99-7458-01A 2 8 Out-of-frame Intra-chr q13.3 Transcription factor q13.3 34732 ChimerSeq STARFusion TCGA_RNA-Seq PAX9-SLC25A21 PAX9 chr14 37135806 + SLC25A21 chr14 37154130 - Exonic hg19 LUAD TCGA-99-7458-01A 2 8 In-Frame Intra-chr q13.3 Transcription factor q13.3 34733 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-IGH@ TNRC6B chr22 40727710 + IGH@ chr14 106209410 - Exonic hg19 LUAD TCGA-S2-AA1A 233 1 Out-of-frame Inter-chr q13.1 32.33 34734 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-IGHG1 TNRC6B chr22 40727710 + IGHG1 chr14 106209410 - Exonic hg19 LUAD TCGA-S2-AA1A 233 1 Out-of-frame Inter-chr q13.1 q32.33 34735 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-IGH@ TNRC6B chr22 40727710 + IGH@ chr14 106136184 - Exonic hg19 LUAD TCGA-S2-AA1A 171 1 Out-of-frame Inter-chr q13.1 32.33 34736 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-IGH@ TNRC6B chr22 40727711 + IGH@ chr14 106237744 - Exonic hg19 LUAD TCGA-S2-AA1A 160 1 Out-of-frame Inter-chr q13.1 32.33 34737 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-IGHG1 TNRC6B chr22 40727711 + IGHG1 chr14 106237744 - Exonic hg19 LUAD TCGA-S2-AA1A 134 1 Out-of-frame Inter-chr q13.1 q32.33 34738 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-IGH@ TNRC6B chr22 40727711 + IGH@ chr14 106092404 - Exonic hg19 LUAD TCGA-S2-AA1A 84 1 Out-of-frame Inter-chr q13.1 32.33 34739 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-TINAGL1 IGHG1 chr14 106134591 - TINAGL1 chr1 32052503 + Exonic hg19 LUAD TCGA-S2-AA1A 19 1 Out-of-frame Inter-chr q32.33 p35.2 34740 ChimerSeq STARFusion TCGA_RNA-Seq CHP1-IGHG1 CHP1 chr15 41523545 + IGHG1 chr14 106209407 - Exonic hg19 LUAD TCGA-S2-AA1A 12 1 Out-of-frame Inter-chr q15.1 q32.33 34741 ChimerSeq STARFusion TCGA_RNA-Seq DPP9-IGHG1 DPP9 chr19 4682811 - IGHG1 chr14 106237739 - Exonic hg19 LUAD TCGA-S2-AA1A 12 1 Out-of-frame Inter-chr p13.3 q32.33 34742 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB2-IGKC DNAJB2 chr2 220151425 + IGKC chr2 89156807 - Exonic hg19 LUAD TCGA-S2-AA1A 9 1 Out-of-frame Intra-chr q35 p11.2 34743 ChimerSeq STARFusion TCGA_RNA-Seq SYVN1-IGKC SYVN1 chr11 64898782 - IGKC chr2 89161074 - Exonic hg19 LUAD TCGA-S2-AA1A 9 1 Out-of-frame Inter-chr q13.1 p11.2 34744 ChimerSeq STARFusion TCGA_RNA-Seq CHP1-IGHG1 CHP1 chr15 41523547 + IGHG1 chr14 106237740 - Exonic hg19 LUAD TCGA-S2-AA1A 7 1 Out-of-frame Inter-chr q15.1 q32.33 34745 ChimerSeq STARFusion TCGA_RNA-Seq DPP9-IGHG1 DPP9 chr19 4682818 - IGHG1 chr14 106209411 - Exonic hg19 LUAD TCGA-S2-AA1A 7 1 Out-of-frame Inter-chr p13.3 q32.33 34746 ChimerSeq STARFusion TCGA_RNA-Seq DPP9-IGHG1 DPP9 chr19 4682811 - IGHG1 chr14 106209404 - Exonic hg19 LUAD TCGA-S2-AA1A 6 1 Out-of-frame Inter-chr p13.3 q32.33 34747 ChimerSeq STARFusion TCGA_RNA-Seq C4B-IGKC C4B chr6 31983925 + IGKC chr2 89160116 - Exonic hg19 LUAD TCGA-S2-AA1A 4 3 Out-of-frame Inter-chr p11.2 34748 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-KRT19 RNA45S5 chrUn_gl000220 110256 + KRT19 chr17 39680426 - Exonic hg19 LUAD TCGA-05-4403-01A 3 8 Out-of-frame Inter-chr q21.2 Tumor suppressor gene 34749 ChimerSeq STARFusion TCGA_RNA-Seq RAI14-ASB4 RAI14 chr5 34687060 + ASB4 chr7 95157125 + Exonic hg19 LUAD TCGA-75-5147-01A 33 106 Out-of-frame Inter-chr p13.2 q21.3 Seq+ 34750 ChimerSeq STARFusion TCGA_RNA-Seq SERGEF-ANKRD29 SERGEF chr11 17981017 - ANKRD29 chr18 21229157 - Exonic hg19 LUAD TCGA-75-5147-01A 16 82 In-Frame Inter-chr p15.1 q11.2 Seq+ 34751 ChimerSeq STARFusion TCGA_RNA-Seq ECE1-NIPAL3 ECE1 chr1 21671869 - NIPAL3 chr1 24766662 + Exonic hg19 LUAD TCGA-75-5147-01A 5 14 In-Frame Intra-chr p36.12 p36.11 Seq+ 34752 ChimerSeq STARFusion TCGA_RNA-Seq ECE1-NIPAL3 ECE1 chr1 21671869 - NIPAL3 chr1 24745781 + Exonic hg19 LUAD TCGA-75-5147-01A 2 14 CDS-5'UTR Intra-chr p36.12 p36.11 Seq+ 34753 ChimerSeq STARFusion TCGA_RNA-Seq OTUD5-TEX101 OTUD5 chrX 48783123 - TEX101 chr19 43906918 + Exonic hg19 LUAD TCGA-75-5147-01A 2 0 CDS-5'UTR Inter-chr p11.23 q13.31 34754 ChimerSeq STARFusion TCGA_RNA-Seq PIK3CB-GRM7 PIK3CB chr3 138474596 - GRM7 chr3 7620109 + Exonic hg19 LUAD TCGA-73-A9RS 2 14 Out-of-frame Intra-chr q22.3 Oncogene p26.1 Seq+ 34755 ChimerSeq STARFusion TCGA_RNA-Seq NAPG-PPP6R2P1 NAPG chr18 10534493 + PPP6R2P1 chr21 15379455 + Exonic hg19 LUAD TCGA-73-A9RS 2 4 Out-of-frame Inter-chr p11.22 q11.2 34756 ChimerSeq STARFusion TCGA_RNA-Seq TMEM131-SPATA16 TMEM131 chr2 98543889 - SPATA16 chr3 172766884 - Exonic hg19 LUAD TCGA-05-4417-01A 6 19 In-Frame Inter-chr q11.2 q26.31 Seq+ 34757 ChimerSeq STARFusion TCGA_RNA-Seq CAPRIN1-TRIM44 CAPRIN1 chr11 34074183 + TRIM44 chr11 35827908 + Exonic hg19 LUAD TCGA-J2-A4AD-01A 5 2 Out-of-frame Intra-chr p13 p13 Seq+ 34758 ChimerSeq STARFusion TCGA_RNA-Seq DHX40-VMP1 DHX40 chr17 57683035 + VMP1 chr17 57917129 + Exonic hg19 LUAD TCGA-J2-A4AD-01A 2 13 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 34759 ChimerSeq STARFusion TCGA_RNA-Seq DNAH14-EPHX1 DNAH14 chr1 225117537 + EPHX1 chr1 226016426 + Exonic hg19 LUAD TCGA-J2-A4AD-01A 2 7 5'UTR-5'UTR Intra-chr q42.12 q42.12 Seq+ 34760 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-CALCA RNA45S5 chrUn_gl000220 114196 + CALCA chr11 14993831 - Exonic hg19 LUAD TCGA-NJ-A55R-01A 6 65 Out-of-frame Inter-chr p15.2 34761 ChimerSeq STARFusion TCGA_RNA-Seq TTLL5-IFT43 TTLL5 chr14 76368567 + IFT43 chr14 76488670 + Exonic hg19 LUAD TCGA-NJ-A55R-01A 2 2 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 34762 ChimerSeq STARFusion TCGA_RNA-Seq IFNAR1-DCLRE1C IFNAR1 chr21 34713480 + DCLRE1C chr10 14951329 - Exonic hg19 LUAD TCGA-O1-A52J-01A 4 48 In-Frame Inter-chr q22.11 p13 Seq+ 34763 ChimerSeq STARFusion TCGA_RNA-Seq ITSN1-NEBL ITSN1 chr21 35015019 + NEBL chr10 21139431 - Exonic hg19 LUAD TCGA-O1-A52J-01A 4 44 5'UTR-CDS Inter-chr q22.11 p12.31 Seq+ 34764 ChimerSeq STARFusion TCGA_RNA-Seq ITSN1-NEBL ITSN1 chr21 35015019 + NEBL chr10 21141578 - Exonic hg19 LUAD TCGA-O1-A52J-01A 2 44 5'UTR-CDS Inter-chr q22.11 p12.31 Seq+ 34765 ChimerSeq STARFusion TCGA_RNA-Seq ITSN1-NEBL ITSN1 chr21 35015019 + NEBL chr10 21129778 - Exonic hg19 LUAD TCGA-O1-A52J-01A 2 44 5'UTR-CDS Inter-chr q22.11 p12.31 Seq+ 34766 ChimerSeq STARFusion TCGA_RNA-Seq RUNX1-CEP76 RUNX1 chr21 36206707 - CEP76 chr18 12686449 - Exonic hg19 LUAD TCGA-O1-A52J-01A 5 17 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor p11.21 Seq+ 34767 ChimerSeq STARFusion TCGA_RNA-Seq MLLT10-KCNJ6 MLLT10 chr10 21827841 + KCNJ6 chr21 39087434 - Exonic hg19 LUAD TCGA-O1-A52J-01A 2 14 Out-of-frame Inter-chr p12.31 Oncogene q22.13 Seq+ 34768 ChimerSeq STARFusion TCGA_RNA-Seq IFNAR2-C21orf49 IFNAR2 chr21 34625135 + C21orf49 chr21 34157108 + Exonic hg19 LUAD TCGA-O1-A52J-01A 3 8 CDS-5'UTR Intra-chr q22.11 34769 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 LUAD TCGA-O1-A52J-01A 3 4 3'UTR-5'UTR Intra-chr q34 34770 ChimerSeq STARFusion TCGA_RNA-Seq ARNT-CBLB ARNT chr1 150849019 - CBLB chr3 105439094 - Exonic hg19 LUAD TCGA-O1-A52J-01A 3 3 Out-of-frame Inter-chr q21.3 Oncogene Transcription factor q13.11 34771 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1217-MKX KIAA1217 chr10 24762989 + MKX chr10 28032426 - Exonic hg19 LUAD TCGA-O1-A52J-01A 3 0 CDS-5'UTR Intra-chr p12.2 p12.1 Transcription factor 34772 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF7-ATP11A ARHGEF7 chr13 111920017 + ATP11A chr13 113459271 + Exonic hg19 LUAD TCGA-O1-A52J-01A 2 2 Out-of-frame Intra-chr q34 q34 Seq+ 34773 ChimerSeq STARFusion TCGA_RNA-Seq SF3B3-CDH15 SF3B3 chr16 70578436 + CDH15 chr16 89245824 + Exonic hg19 LUAD TCGA-44-7667-01A 68 190 In-Frame Intra-chr q22.1 q24.3 Seq+ 34774 ChimerSeq STARFusion TCGA_RNA-Seq SLC14A2-ABHD3 SLC14A2 chr18 42793156 + ABHD3 chr18 19244191 - Exonic hg19 LUAD TCGA-44-7667-01A 32 122 5'UTR-CDS Intra-chr q12.3 q11.2 Seq+ 34775 ChimerSeq STARFusion TCGA_RNA-Seq SLC14A2-ABHD3 SLC14A2 chr18 42793156 + ABHD3 chr18 19239304 - Exonic hg19 LUAD TCGA-44-7667-01A 16 122 5'UTR-CDS Intra-chr q12.3 q11.2 Seq+ 34776 ChimerSeq STARFusion TCGA_RNA-Seq TGIF1-DDX19B TGIF1 chr18 3447795 + DDX19B chr16 70348805 + Exonic hg19 LUAD TCGA-44-7667-01A 9 54 In-Frame Inter-chr p11.31 Transcription factor q22.1 Seq+ 34777 ChimerSeq STARFusion TCGA_RNA-Seq GTF2F2-CTIF GTF2F2 chr13 45781640 + CTIF chr18 46284290 + Exonic hg19 LUAD TCGA-44-7667-01A 10 49 In-Frame Inter-chr q14.12 Seq+ 34778 ChimerSeq STARFusion TCGA_RNA-Seq TGIF1-DDX19B TGIF1 chr18 3447795 + DDX19B chr16 70346512 + Exonic hg19 LUAD TCGA-44-7667-01A 3 54 Out-of-frame Inter-chr p11.31 Transcription factor q22.1 Seq+ 34779 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-TGIF1 ANKRD11 chr16 89556653 - TGIF1 chr18 3456352 + Exonic hg19 LUAD TCGA-44-7667-01A 8 7 5'UTR-5'UTR Inter-chr q24.3 p11.31 Transcription factor Seq+ 34780 ChimerSeq STARFusion TCGA_RNA-Seq CTIF-C6orf57 CTIF chr18 46288060 + C6orf57 chr6 71298318 + Exonic hg19 LUAD TCGA-44-7667-01A 3 17 Out-of-frame Inter-chr Seq+ 34781 ChimerSeq STARFusion TCGA_RNA-Seq NCLN-ACSBG2 NCLN chr19 3193426 + ACSBG2 chr19 6187294 + Exonic hg19 LUAD TCGA-75-5125-01A 10 19 In-Frame Intra-chr p13.3 p13.3 Seq+ 34782 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3B-KHDRBS3 FNDC3B chr3 171757561 + KHDRBS3 chr8 136619198 + Exonic hg19 LUAD TCGA-78-7147-01A 73 596 5'UTR-CDS Inter-chr q26.31 q24.23 Seq+ 34783 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3B-KHDRBS3 FNDC3B chr3 171758414 + KHDRBS3 chr8 136619198 + Exonic hg19 LUAD TCGA-78-7147-01A 42 596 5'UTR-CDS Inter-chr q26.31 q24.23 Seq+ 34784 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3B-KHDRBS3 FNDC3B chr3 171757561 + KHDRBS3 chr8 136657302 + Exonic hg19 LUAD TCGA-78-7147-01A 32 596 5'UTR-CDS Inter-chr q26.31 q24.23 Seq+ 34785 ChimerSeq STARFusion TCGA_RNA-Seq KPNA1-GMPS KPNA1 chr3 122215284 - GMPS chr3 155637022 + Exonic hg19 LUAD TCGA-78-7147-01A 14 189 In-Frame Intra-chr q21.1 q25.31 Seq+ 34786 ChimerSeq STARFusion TCGA_RNA-Seq SENP5-TCTEX1D2 SENP5 chr3 196594944 + TCTEX1D2 chr3 196033883 - Exonic hg19 LUAD TCGA-78-7147-01A 23 49 5'UTR-CDS Intra-chr q29 q29 Seq+ 34787 ChimerSeq STARFusion TCGA_RNA-Seq TSC22D2-SELT TSC22D2 chr3 150129095 + SELT chr3 150340172 + Exonic hg19 LUAD TCGA-78-7147-01A 9 51 In-Frame Intra-chr q25.1 34788 ChimerSeq STARFusion TCGA_RNA-Seq LIMD1-LARS2 LIMD1 chr3 45707209 + LARS2 chr3 45565489 + Exonic hg19 LUAD TCGA-78-7147-01A 5 25 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 34789 ChimerSeq STARFusion TCGA_RNA-Seq FAM83A-LYN FAM83A chr8 124206388 + LYN chr8 56910905 + Exonic hg19 LUAD TCGA-78-7147-01A 4 5 Out-of-frame Intra-chr q24.13 q12.1 TK:Src Seq+ 34790 ChimerSeq STARFusion TCGA_RNA-Seq RSRC1-MFSD1 RSRC1 chr3 157921034 + MFSD1 chr3 158541217 + Exonic hg19 LUAD TCGA-78-7147-01A 2 11 Out-of-frame Intra-chr q25.32 q25.32 Seq+ 34791 ChimerSeq STARFusion TCGA_RNA-Seq PRKAA1-TBC1D5 PRKAA1 chr5 40798165 - TBC1D5 chr3 17255862 - Exonic hg19 LUAD TCGA-55-7994-01A 10 35 In-Frame Inter-chr p13.1 Tumor suppressor gene p24.3 Seq+ 34792 ChimerSeq STARFusion TCGA_RNA-Seq SMURF2-DDX5 SMURF2 chr17 62657947 - DDX5 chr17 62500960 - Exonic hg19 LUAD TCGA-55-7994-01A 5 9 Out-of-frame Intra-chr q24.1 q23.3 34793 ChimerSeq STARFusion TCGA_RNA-Seq TPPP-BRD9 TPPP chr5 693393 - BRD9 chr5 880004 - Exonic hg19 LUAD TCGA-55-7994-01A 2 2 5'UTR-CDS Intra-chr p15.33 p15.33 34794 ChimerSeq STARFusion TCGA_RNA-Seq MTND4P24-IGKC MTND4P24 chrX 125607175 + IGKC chr2 89161431 - Exonic hg19 LUAD TCGA-4B-A93V 158 1 Out-of-frame Inter-chr q25 p11.2 34795 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106175004 - Exonic hg19 LUAD TCGA-4B-A93V 59 5 Out-of-frame Inter-chr q24.2 32.33 34796 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHA1 SLC7A5 chr16 87868137 - IGHA1 chr14 106175004 - Exonic hg19 LUAD TCGA-4B-A93V 59 2 Out-of-frame Inter-chr q24.2 34797 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF1-TTF1 RAPGEF1 chr9 134514022 - TTF1 chr9 135251555 - Exonic hg19 LUAD TCGA-4B-A93V 20 51 Out-of-frame Intra-chr q34.13 q34.13 Tumor suppressor gene Transcription factor Seq+ 34798 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-TBL3 IGH@ chr14 106691674 - TBL3 chr16 2025188 + Exonic hg19 LUAD TCGA-4B-A93V 27 1 Out-of-frame Inter-chr 32.33 p13.3 34799 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-TBL3 IGH@ chr14 106815725 - TBL3 chr16 2025186 + Exonic hg19 LUAD TCGA-4B-A93V 26 1 Out-of-frame Inter-chr 32.33 p13.3 34800 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106054734 - Exonic hg19 LUAD TCGA-4B-A93V 19 3 Out-of-frame Inter-chr q24.2 32.33 34801 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-TBL3 IGH@ chr14 106791008 - TBL3 chr16 2025186 + Exonic hg19 LUAD TCGA-4B-A93V 17 1 Out-of-frame Inter-chr 32.33 p13.3 34802 ChimerSeq STARFusion TCGA_RNA-Seq IDI1-AKR1C3 IDI1 chr10 1094804 - AKR1C3 chr10 5120092 + Exonic hg19 LUAD TCGA-4B-A93V 8 13 CDS-5'UTR Intra-chr p15.3 p15.1 Seq+ 34803 ChimerSeq STARFusion TCGA_RNA-Seq DIP2C-TUBB8 DIP2C chr10 735434 - TUBB8 chr10 94852 - Exonic hg19 LUAD TCGA-4B-A93V 4 18 Out-of-frame Intra-chr p15.3 p15.3 Seq+ 34804 ChimerSeq STARFusion TCGA_RNA-Seq FAM49B-ASAP1 FAM49B chr8 130915558 - ASAP1 chr8 131124568 - Exonic hg19 LUAD TCGA-4B-A93V 2 8 5'UTR-CDS Intra-chr q24.21 q24.22 Seq+ 34805 ChimerSeq STARFusion TCGA_RNA-Seq GTPBP1-TOMM22 GTPBP1 chr22 39124166 + TOMM22 chr22 39078884 + Exonic hg19 LUAD TCGA-44-2659-01A 11 21 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 34806 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-ZNF385C TAOK1 chr17 27778698 + ZNF385C chr17 40186353 - Exonic hg19 LUAD TCGA-44-2659-01A 2 5 In-Frame Intra-chr q11.2 q21.2 Transcription factor Seq+ 34807 ChimerSeq STARFusion TCGA_RNA-Seq RERE-GPR157 RERE chr1 8482787 - GPR157 chr1 9171548 - Exonic hg19 LUAD TCGA-55-7574-01A 4 24 Out-of-frame Intra-chr p36.23 p36.22 Seq+ 34808 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF10L-TMCO4 ARHGEF10L chr1 17866445 + TMCO4 chr1 20107259 - Exonic hg19 LUAD TCGA-55-7574-01A 3 1 5'UTR-5'UTR Intra-chr p36.13 p36.13 Seq+ 34809 ChimerSeq STARFusion TCGA_RNA-Seq EP400-SFSWAP EP400 chr12 132535200 + SFSWAP chr12 132249001 + Exonic hg19 LUAD TCGA-05-4384-01A 3 9 Out-of-frame Intra-chr q24.33 Oncogene q24.33 Seq+ 34810 ChimerSeq STARFusion TCGA_RNA-Seq OTUD5-TEX101 OTUD5 chrX 48783123 - TEX101 chr19 43906918 + Exonic hg19 LUAD TCGA-05-4384-01A 2 0 CDS-5'UTR Inter-chr p11.23 q13.31 34811 ChimerSeq STARFusion TCGA_RNA-Seq EFCAB2-IGLL5 EFCAB2 chr1 245133508 + IGLL5 chr22 23235959 + Exonic hg19 LUAD TCGA-55-8092-01A 5 0 Out-of-frame Inter-chr q44 q11.22 34812 ChimerSeq STARFusion TCGA_RNA-Seq LOC100505549-SSU72 LOC100505549 chr18 55309284 + SSU72 chr1 1500296 - Exonic hg19 LUAD TCGA-55-8092-01A 2 1 Out-of-frame Inter-chr p36.33 34813 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1E-SPRR3 CSNK1E chr22 38694791 - SPRR3 chr1 152974230 + Exonic hg19 LUAD TCGA-05-4382-01A 4 18 CDS-5'UTR Inter-chr q13.1 q21.3 Seq+ 34814 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-ELK2AP GAS6 chr13 114525073 - ELK2AP chr14 106136185 - Exonic hg19 LUAD TCGA-05-4382-01A 8 0 Out-of-frame Inter-chr q34 Oncogene 34815 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A32-C8orf56 SLC25A32 chr8 104427012 - C8orf56 chr8 104145597 - Exonic hg19 LUAD TCGA-05-4382-01A 2 11 CDS-3'UTR Intra-chr q22.3 Seq+ 34816 ChimerSeq STARFusion TCGA_RNA-Seq UNC13B-TAF7L UNC13B chr9 35162302 + TAF7L chrX 100524225 - Exonic hg19 LUAD TCGA-05-4382-01A 2 10 Out-of-frame Inter-chr p13.3 q22.1 Seq+ 34817 ChimerSeq STARFusion TCGA_RNA-Seq EPS15L1-LOC400685 EPS15L1 chr19 16547748 - LOC400685 chr19 35309670 - Exonic hg19 LUAD TCGA-05-4382-01A 2 6 3'UTR-3'UTR Intra-chr p13.11 34818 ChimerSeq STARFusion TCGA_RNA-Seq FTO-RBL2 FTO chr16 53738141 + RBL2 chr16 53472928 + Exonic hg19 LUAD TCGA-05-4382-01A 3 2 In-Frame Intra-chr q12.2 q12.2 Tumor suppressor gene Seq+ 34819 ChimerSeq STARFusion TCGA_RNA-Seq TTC19-SPTB TTC19 chr17 15909882 + SPTB chr14 65246649 - Exonic hg19 LUAD TCGA-05-4382-01A 3 2 Out-of-frame Inter-chr p12 q23.3 34820 ChimerSeq STARFusion TCGA_RNA-Seq COQ6-ACOT4 COQ6 chr14 74428606 + ACOT4 chr14 74061753 + Exonic hg19 LUAD TCGA-05-4382-01A 2 5 In-Frame Intra-chr q24.3 q24.3 Seq+ 34821 ChimerSeq STARFusion TCGA_RNA-Seq SFTPB-USP39 SFTPB chr2 85890469 - USP39 chr2 85868099 + Exonic hg19 LUAD TCGA-99-8025-01A 12 39 In-Frame Intra-chr p11.2 p11.2 Seq+ 34822 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-PACS1 KDM2A chr11 66888829 + PACS1 chr11 65960957 + Exonic hg19 LUAD TCGA-99-8025-01A 6 16 Out-of-frame Intra-chr q13.2 Transcription factor q13.1 Seq+ 34823 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC10-GRIK1 TRAPPC10 chr21 45432441 + GRIK1 chr21 31066382 - Exonic hg19 LUAD TCGA-69-8453-01A 5 9 In-Frame Intra-chr q22.3 q21.3 Seq+ 34824 ChimerSeq STARFusion TCGA_RNA-Seq SREBF2-EFCAB6 SREBF2 chr22 42276996 + EFCAB6 chr22 43950976 - Exonic hg19 LUAD TCGA-99-AA5R 2 7 Out-of-frame Intra-chr q13.2 Transcription factor q13.31 Seq+ 34825 ChimerSeq STARFusion TCGA_RNA-Seq COL14A1-SREBF2 COL14A1 chr8 121241008 + SREBF2 chr22 42271341 + Exonic hg19 LUAD TCGA-99-AA5R 2 6 Out-of-frame Inter-chr q24.12 q13.2 Transcription factor Seq+ 34826 ChimerSeq STARFusion TCGA_RNA-Seq YWHAH-LINC00314 YWHAH chr22 32340806 + LINC00314 chr21 29395016 + Exonic hg19 LUAD TCGA-99-AA5R 2 5 CDS-5'UTR Inter-chr q12.3 q21.3 34827 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC20-ALB ZDHHC20 chr13 21946962 - ALB chr4 74272346 + Exonic hg19 LUAD TCGA-75-6206-01A 5 13 3'UTR-CDS Inter-chr q12.11 q13.3 34828 ChimerSeq STARFusion TCGA_RNA-Seq COL1A2-RNA45S5 COL1A2 chr7 94038687 + RNA45S5 chrUn_gl000220 118717 + Exonic hg19 LUAD TCGA-44-2666-01A 6 1 Out-of-frame Inter-chr q21.3 34829 ChimerSeq STARFusion TCGA_RNA-Seq SNORA50-CNOT1 SNORA50 chr16 58593708 - CNOT1 chr16 58594266 - Exonic hg19 LUAD TCGA-44-2666-01A 3 5 3'UTR-CDS Intra-chr q23.3 q21 34830 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 58012661 + VMP1 chr17 57886157 + Exonic hg19 LUAD TCGA-55-A490 12 2 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 34831 ChimerSeq STARFusion TCGA_RNA-Seq ATXN3-MAML3 ATXN3 chr14 92537355 - MAML3 chr4 140810657 - Exonic hg19 LUAD TCGA-55-A490 10 1 Out-of-frame Inter-chr q32.12 q31.1 34832 ChimerSeq STARFusion TCGA_RNA-Seq ASAP1-SAMD12 ASAP1 chr8 131370263 - SAMD12 chr8 119209971 - Exonic hg19 LUAD TCGA-35-4122-01A 8 6 Out-of-frame Intra-chr q24.22 q24.12 Seq+ 34833 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-MMP20 TMEM123 chr11 102319543 - MMP20 chr11 102480761 - Exonic hg19 LUAD TCGA-35-4122-01A 4 12 In-Frame Intra-chr q22.2 q22.2 Seq+ 34834 ChimerSeq STARFusion TCGA_RNA-Seq DHDDS-LOC100507412 DHDDS chr1 26769364 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LUAD TCGA-35-4122-01A 3 5 CDS-5'UTR Inter-chr p36.11 34835 ChimerSeq STARFusion TCGA_RNA-Seq DIP2B-GPD1 DIP2B chr12 50899023 + GPD1 chr12 50500588 + Exonic hg19 LUAD TCGA-35-4122-01A 3 2 In-Frame Intra-chr q13.12 q13.12 34836 ChimerSeq STARFusion TCGA_RNA-Seq IP6K1-UBA7 IP6K1 chr3 49785251 - UBA7 chr3 49851375 - Exonic hg19 LUAD TCGA-35-4122-01A 3 2 CDS-5'UTR Intra-chr p21.31 p21.31 Seq+ 34837 ChimerSeq STARFusion TCGA_RNA-Seq VKORC1-ZNF646 VKORC1 chr16 31104633 - ZNF646 chr16 31094292 + Exonic hg19 LUAD TCGA-35-4122-01A 3 2 In-Frame Intra-chr p11.2 p11.2 Transcription factor 34838 ChimerSeq STARFusion TCGA_RNA-Seq RHPN2-VSTM2B RHPN2 chr19 33555690 - VSTM2B chr19 30054753 + Exonic hg19 LUAD TCGA-55-8301-01A 2 16 Out-of-frame Intra-chr q13.11 q12 Seq+ 34839 ChimerSeq STARFusion TCGA_RNA-Seq SLC38A10-ARHGDIA SLC38A10 chr17 79220123 - ARHGDIA chr17 79825921 - Exonic hg19 LUAD TCGA-55-8301-01A 4 6 Out-of-frame Intra-chr q25.3 q25.3 34840 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 125020111 - SCARB1 chr12 125284788 - Exonic hg19 LUAD TCGA-55-8301-01A 2 12 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 34841 ChimerSeq STARFusion TCGA_RNA-Seq VPRBP-POC1A VPRBP chr3 51497130 - POC1A chr3 52185116 - Exonic hg19 LUAD TCGA-55-8301-01A 3 5 In-Frame Intra-chr p21.2 Seq+ 34842 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-ORAOV1 MYH9 chr22 36744949 - ORAOV1 chr11 69488089 - Exonic hg19 LUAD TCGA-64-1678-01A 9 70 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene q13.3 Seq+ 34843 ChimerSeq STARFusion TCGA_RNA-Seq SNAPIN-S100A1 SNAPIN chr1 153632042 + S100A1 chr1 153604174 + Exonic hg19 LUAD TCGA-64-1678-01A 11 47 In-Frame Intra-chr q21.3 q21.3 Seq+ 34844 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-ORAOV1 MYH9 chr22 36744949 - ORAOV1 chr11 69486587 - Exonic hg19 LUAD TCGA-64-1678-01A 4 70 In-Frame Inter-chr q12.3 Oncogene Tumor suppressor gene q13.3 Seq+ 34845 ChimerSeq STARFusion TCGA_RNA-Seq SNAPIN-S100A1 SNAPIN chr1 153632042 + S100A1 chr1 153600903 + Exonic hg19 LUAD TCGA-64-1678-01A 3 47 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 34846 ChimerSeq STARFusion TCGA_RNA-Seq TRIOBP-UNC13C TRIOBP chr22 38165382 + UNC13C chr15 54914525 + Exonic hg19 LUAD TCGA-64-1678-01A 5 23 Out-of-frame Inter-chr q13.1 q21.3 Seq+ 34847 ChimerSeq STARFusion TCGA_RNA-Seq TRIOBP-UNC13C TRIOBP chr22 38164183 + UNC13C chr15 54914525 + Exonic hg19 LUAD TCGA-64-1678-01A 4 23 Out-of-frame Inter-chr q13.1 q21.3 Seq+ 34848 ChimerSeq STARFusion TCGA_RNA-Seq IGHMBP2-C22orf23 IGHMBP2 chr11 68671506 + C22orf23 chr22 38341180 - Exonic hg19 LUAD TCGA-64-1678-01A 2 11 Out-of-frame Inter-chr q13.3 q13.1 Seq+ 34849 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 LUAD TCGA-64-1678-01A 4 2 3'UTR-5'UTR Intra-chr q34 34850 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC8-ANK3 TRAPPC8 chr18 29522571 - ANK3 chr10 61965648 - Exonic hg19 LUAD TCGA-55-6971-01A 19 89 Out-of-frame Inter-chr q12.1 q21.2 Seq+ 34851 ChimerSeq STARFusion TCGA_RNA-Seq GOSR1-AP2B1 GOSR1 chr17 28819771 + AP2B1 chr17 34009714 + Exonic hg19 LUAD TCGA-55-6971-01A 11 35 In-Frame Intra-chr q11.2 q12 Seq+ 34852 ChimerSeq STARFusion TCGA_RNA-Seq MCOLN2-CDK1 MCOLN2 chr1 85462479 - CDK1 chr10 62539899 + Exonic hg19 LUAD TCGA-55-6971-01A 6 13 CDS-5'UTR Inter-chr p22.3 q21.2 Seq+ 34853 ChimerSeq STARFusion TCGA_RNA-Seq SFTPB-MPC1 SFTPB chr2 85893739 - MPC1 chr6 166778937 - Exonic hg19 LUAD TCGA-55-6971-01A 3 1 Out-of-frame Inter-chr p11.2 q27 Seq+ 34854 ChimerSeq STARFusion TCGA_RNA-Seq PHRF1-LRRC56 PHRF1 chr11 601701 + LRRC56 chr11 551131 + Exonic hg19 LUAD TCGA-55-6971-01A 2 4 In-Frame Intra-chr p15.5 p15.5 Seq+ 34855 ChimerSeq STARFusion TCGA_RNA-Seq RBL1-STK4 RBL1 chr20 35717392 - STK4 chr20 43653614 + Exonic hg19 LUAD TCGA-55-6971-01A 2 1 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q13.12 34856 ChimerSeq STARFusion TCGA_RNA-Seq GMCL1-ANXA4 GMCL1 chr2 70057284 + ANXA4 chr2 70008652 + Exonic hg19 LUAD TCGA-69-8255-01A 16 53 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 34857 ChimerSeq STARFusion TCGA_RNA-Seq SCARB2-AREG SCARB2 chr4 77134580 - AREG chr4 75312251 + Exonic hg19 LUAD TCGA-69-8255-01A 10 26 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 34858 ChimerSeq STARFusion TCGA_RNA-Seq GMCL1-ANXA4 GMCL1 chr2 70057284 + ANXA4 chr2 70031665 + Exonic hg19 LUAD TCGA-69-8255-01A 3 53 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 34859 ChimerSeq STARFusion TCGA_RNA-Seq BPTF-LOC100130964 BPTF chr17 65920705 + LOC100130964 chr8 39430763 + Exonic hg19 LUAD TCGA-69-8255-01A 11 17 CDS-5'UTR Inter-chr q24.2 Transcription factor 34860 ChimerSeq STARFusion TCGA_RNA-Seq RPL23AP7-LOC644145 RPL23AP7 chr2 114383186 - LOC644145 chr4 56703251 + Exonic hg19 LUAD TCGA-69-8255-01A 13 8 3'UTR-5'UTR Inter-chr q14.1 34861 ChimerSeq STARFusion TCGA_RNA-Seq RPL23AP82-LOC644145 RPL23AP82 chr22 51223721 + LOC644145 chr4 56703251 + Exonic hg19 LUAD TCGA-69-8255-01A 6 35 5'UTR-5'UTR Inter-chr 34862 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC9-C2CD5 TRAPPC9 chr8 141407719 - C2CD5 chr12 22680826 - Exonic hg19 LUAD TCGA-69-8255-01A 6 15 Out-of-frame Inter-chr q24.3 p12.1 Seq+ 34863 ChimerSeq STARFusion TCGA_RNA-Seq LOC100133985-C2orf42 LOC100133985 chr2 70352178 - C2orf42 chr2 70377696 - Exonic hg19 LUAD TCGA-69-8255-01A 5 9 3'UTR-CDS Intra-chr p13.3 34864 ChimerSeq STARFusion TCGA_RNA-Seq BPTF-LOC100130964 BPTF chr17 65919106 + LOC100130964 chr8 39430763 + Exonic hg19 LUAD TCGA-69-8255-01A 2 17 CDS-5'UTR Inter-chr q24.2 Transcription factor 34865 ChimerSeq STARFusion TCGA_RNA-Seq COL26A1-BET1 COL26A1 chr7 101006471 + BET1 chr7 93623697 - Exonic hg19 LUAD TCGA-69-8255-01A 3 13 Out-of-frame Intra-chr q22.1 q21.3 Seq+ 34866 ChimerSeq STARFusion TCGA_RNA-Seq NUP54-CXCL9 NUP54 chr4 77045802 - CXCL9 chr4 76927427 - Exonic hg19 LUAD TCGA-69-8255-01A 2 14 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 34867 ChimerSeq STARFusion TCGA_RNA-Seq IKBKB-GOT1L1 IKBKB chr8 42151030 + GOT1L1 chr8 37796399 - Exonic hg19 LUAD TCGA-69-8255-01A 3 8 In-Frame Intra-chr p11.21 Oncogene p11.23 Seq+ 34868 ChimerSeq STARFusion TCGA_RNA-Seq CXCL17-EXOSC5 CXCL17 chr19 42937128 - EXOSC5 chr19 41897867 - Exonic hg19 LUAD TCGA-35-5375-01A 3 6 In-Frame Intra-chr q13.2 q13.2 Seq+ 34869 ChimerSeq STARFusion TCGA_RNA-Seq LRBA-DRD3 LRBA chr4 151749332 - DRD3 chr3 113847759 - Exonic hg19 LUAD TCGA-35-5375-01A 2 5 Out-of-frame Inter-chr q31.3 q13.31 Seq+ 34870 ChimerSeq STARFusion TCGA_RNA-Seq MPRIP-SREBF1 MPRIP chr17 16946285 + SREBF1 chr17 17723835 - Exonic hg19 LUAD TCGA-35-5375-01A 2 2 Out-of-frame Intra-chr p11.2 p11.2 Transcription factor Seq+ 34871 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHGP STK25 chr2 242434915 - IGHGP chr14 106136184 - Exonic hg19 LUAD TCGA-55-6983-01A 91 1 Out-of-frame Inter-chr q37.3 34872 ChimerSeq STARFusion TCGA_RNA-Seq TGFB1I1-IGL@ TGFB1I1 chr16 31488909 + IGL@ chr22 23241801 + Exonic hg19 LUAD TCGA-55-6983-01A 69 1 Out-of-frame Inter-chr p11.2 q11.22 34873 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHGP STK25 chr2 242434915 - IGHGP chr14 106209410 - Exonic hg19 LUAD TCGA-55-6983-01A 31 1 Out-of-frame Inter-chr q37.3 34874 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-LSM14A IGL@ chr22 23223570 + LSM14A chr19 34710360 + Exonic hg19 LUAD TCGA-55-6983-01A 7 2 Out-of-frame Inter-chr q11.22 34875 ChimerSeq STARFusion TCGA_RNA-Seq RRBP1-TASP1 RRBP1 chr20 17614105 - TASP1 chr20 13398168 - Exonic hg19 LUAD TCGA-91-6831-01A 15 88 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 34876 ChimerSeq STARFusion TCGA_RNA-Seq TAF4-TSHZ2 TAF4 chr20 60572606 - TSHZ2 chr20 52103683 + Exonic hg19 LUAD TCGA-91-6831-01A 15 75 CDS-3'UTR Intra-chr q13.2 Transcription factor Seq+ 34877 ChimerSeq STARFusion TCGA_RNA-Seq SNAI1-PFDN4 SNAI1 chr20 48600888 + PFDN4 chr20 52835558 + Exonic hg19 LUAD TCGA-91-6831-01A 16 47 Out-of-frame Intra-chr q13.13 Transcription factor q13.2 Seq+ 34878 ChimerSeq STARFusion TCGA_RNA-Seq MTAP-FLJ35282 MTAP chr9 21818201 + FLJ35282 chr9 22820737 + Exonic hg19 LUAD TCGA-91-6831-01A 4 23 CDS-5'UTR Intra-chr p21.3 Tumor suppressor gene Seq+ 34879 ChimerSeq STARFusion TCGA_RNA-Seq ERO1LB-HEATR1 ERO1LB chr1 236388370 - HEATR1 chr1 236721829 - Exonic hg19 LUAD TCGA-91-6831-01A 2 12 In-Frame Intra-chr q43 Seq+ 34880 ChimerSeq STARFusion TCGA_RNA-Seq CIRBP-WDR18 CIRBP chr19 1269409 + WDR18 chr19 994019 + Exonic hg19 LUAD TCGA-91-6831-01A 2 8 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 34881 ChimerSeq STARFusion TCGA_RNA-Seq MRPL21-LRP5 MRPL21 chr11 68663983 - LRP5 chr11 68115315 + Exonic hg19 LUAD TCGA-91-6831-01A 2 4 Out-of-frame Intra-chr q13.3 q13.2 Seq+ 34882 ChimerSeq STARFusion TCGA_RNA-Seq TRPC4AP-ADNP TRPC4AP chr20 33680417 - ADNP chr20 49511049 - Exonic hg19 LUAD TCGA-91-6831-01A 2 3 In-Frame Intra-chr q11.22 q13.13 Transcription factor Seq+ 34883 ChimerSeq STARFusion TCGA_RNA-Seq FYTTD1-DNAJC7 FYTTD1 chr3 197505335 + DNAJC7 chr17 40146962 - Exonic hg19 LUAD TCGA-93-8067-01A 20 84 In-Frame Inter-chr q29 q21.2 Seq+ 34884 ChimerSeq STARFusion TCGA_RNA-Seq SWAP70-PYY2 SWAP70 chr11 9715833 + PYY2 chr17 26554332 + Exonic hg19 LUAD TCGA-93-8067-01A 9 69 CDS-5'UTR Inter-chr p15.4 q11.2 Seq+ 34885 ChimerSeq STARFusion TCGA_RNA-Seq RHOT1-LRRC37B RHOT1 chr17 30469748 + LRRC37B chr17 30374780 + Exonic hg19 LUAD TCGA-93-8067-01A 4 40 In-Frame Intra-chr q11.2 q11.2 Seq+ 34886 ChimerSeq STARFusion TCGA_RNA-Seq RHOT1-LRRC37B RHOT1 chr17 30469748 + LRRC37B chr17 30372719 + Exonic hg19 LUAD TCGA-93-8067-01A 3 40 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 34887 ChimerSeq STARFusion TCGA_RNA-Seq ZNF143-TMEM41B ZNF143 chr11 9482623 + TMEM41B chr11 9309353 - Exonic hg19 LUAD TCGA-93-8067-01A 12 4 5'UTR-CDS Intra-chr p15.4 Transcription factor p15.4 Seq+ 34888 ChimerSeq STARFusion TCGA_RNA-Seq TCF20-MKL1 TCF20 chr22 42605657 - MKL1 chr22 40831558 - Exonic hg19 LUAD TCGA-93-8067-01A 6 24 Out-of-frame Intra-chr Transcription factor q13.2 Seq+ 34889 ChimerSeq STARFusion TCGA_RNA-Seq ZMYM4-SSBP4 ZMYM4 chr1 35855699 + SSBP4 chr19 18538161 + Exonic hg19 LUAD TCGA-93-8067-01A 5 19 Out-of-frame Inter-chr p34.3 p13.11 Seq+ 34890 ChimerSeq STARFusion TCGA_RNA-Seq RAI1-MRGPRF RAI1 chr17 17585107 + MRGPRF chr11 68773729 - Exonic hg19 LUAD TCGA-93-8067-01A 6 4 5'UTR-CDS Inter-chr p11.2 q13.3 Seq+ 34891 ChimerSeq STARFusion TCGA_RNA-Seq FOXJ3-LOC284385 FOXJ3 chr1 42693554 - LOC284385 chr19 9737460 + Exonic hg19 LUAD TCGA-93-8067-01A 2 10 In-Frame Inter-chr p34.2 Transcription factor 34892 ChimerSeq STARFusion TCGA_RNA-Seq STAT5B-NTN1 STAT5B chr17 40428266 - NTN1 chr17 9142957 + Exonic hg19 LUAD TCGA-93-8067-01A 3 1 5'UTR-CDS Intra-chr q21.2 Transcription factor p13.1 Seq+ 34893 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB11-ZZZ3 ZBTB11 chr3 101371340 - ZZZ3 chr1 78099090 - Exonic hg19 LUAD TCGA-93-8067-01A 2 1 CDS-5'UTR Inter-chr q12.3 Transcription factor p31.1 Transcription factor 34894 ChimerSeq STARFusion TCGA_RNA-Seq MAMLD1-LOC100507412 MAMLD1 chrX 149531797 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LUAD TCGA-97-A4M6-01A 3 2 5'UTR-5'UTR Inter-chr q28 34895 ChimerSeq STARFusion TCGA_RNA-Seq LEPRE1-ERI3 LEPRE1 chr1 43227994 - ERI3 chr1 44687312 - Exonic hg19 LUAD TCGA-55-6982-01A 10 39 Out-of-frame Intra-chr p34.1 Seq+ 34896 ChimerSeq STARFusion TCGA_RNA-Seq SLC12A7-TMEM117 SLC12A7 chr5 1094269 - TMEM117 chr12 44693363 + Exonic hg19 LUAD TCGA-55-6982-01A 8 30 Out-of-frame Inter-chr p15.33 q12 Seq+ 34897 ChimerSeq STARFusion TCGA_RNA-Seq FBXW7-PAPSS1 FBXW7 chr4 153456093 - PAPSS1 chr4 108622441 - Exonic hg19 LUAD TCGA-78-8655-01A 2 1 5'UTR-CDS Intra-chr q31.3 Oncogene Tumor suppressor gene q25 34898 ChimerSeq STARFusion TCGA_RNA-Seq MLLT6-LASP1 MLLT6 chr17 36861994 + LASP1 chr17 37046673 + Exonic hg19 LUAD TCGA-44-A4SS-01A 6 137 Out-of-frame Intra-chr q12 q12 Seq+ 34899 ChimerSeq STARFusion TCGA_RNA-Seq ITGAV-PDE11A ITGAV chr2 187455250 + PDE11A chr2 178769914 - Exonic hg19 LUAD TCGA-44-A4SS-01A 2 17 Out-of-frame Intra-chr q32.1 Tumor suppressor gene q31.2 Seq+ 34900 ChimerSeq STARFusion TCGA_RNA-Seq ALG11-ZFYVE28 ALG11 chr13 52586598 + ZFYVE28 chr4 2275943 - Exonic hg19 LUAD TCGA-55-8513-01A 2 1 In-Frame Inter-chr q14.3 p16.3 Seq+ 34901 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 125051854 - SCARB1 chr12 125302253 - Exonic hg19 LUAD TCGA-78-7152-01A 30 29 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 34902 ChimerSeq STARFusion TCGA_RNA-Seq ADNP-DDX27 ADNP chr20 49547363 - DDX27 chr20 47837989 + Exonic hg19 LUAD TCGA-78-7152-01A 25 11 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.13 Seq+ 34903 ChimerSeq STARFusion TCGA_RNA-Seq SRC-LOC388796 SRC chr20 35974658 + LOC388796 chr20 37049745 - Exonic hg19 LUAD TCGA-78-7152-01A 7 57 5'UTR-3'UTR Intra-chr q11.23 TK:Src Oncogene 34904 ChimerSeq STARFusion TCGA_RNA-Seq SRC-LOC388796 SRC chr20 35973290 + LOC388796 chr20 37049745 - Exonic hg19 LUAD TCGA-78-7152-01A 7 57 5'UTR-3'UTR Intra-chr q11.23 TK:Src Oncogene 34905 ChimerSeq STARFusion TCGA_RNA-Seq SRC-LOC388796 SRC chr20 35974658 + LOC388796 chr20 37051014 - Exonic hg19 LUAD TCGA-78-7152-01A 5 57 5'UTR-3'UTR Intra-chr q11.23 TK:Src Oncogene 34906 ChimerSeq STARFusion TCGA_RNA-Seq GABPB2-PRUNE GABPB2 chr1 151043410 + PRUNE chr1 150997087 + Exonic hg19 LUAD TCGA-78-7152-01A 2 2 5'UTR-CDS Intra-chr q21.3 34907 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-BCAS3 TAOK1 chr17 27838010 + BCAS3 chr17 58885365 + Exonic hg19 LUAD TCGA-91-6847-01A 5 28 Out-of-frame Intra-chr q11.2 q23.2 Seq+ 34908 ChimerSeq STARFusion TCGA_RNA-Seq DDX19A-ABCC11 DDX19A chr16 70384508 + ABCC11 chr16 48269088 - Exonic hg19 LUAD TCGA-91-6847-01A 5 5 CDS-5'UTR Intra-chr q22.1 q12.1 Seq+ 34909 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-GIT1 BCAS3 chr17 58946044 + GIT1 chr17 27905797 - Exonic hg19 LUAD TCGA-91-6847-01A 3 8 In-Frame Intra-chr q23.2 q11.2 Seq+ 34910 ChimerSeq STARFusion TCGA_RNA-Seq RAB12-PPP4R1 RAB12 chr18 8609951 + PPP4R1 chr18 9577189 - Exonic hg19 LUAD TCGA-44-3918-01A 5 14 Out-of-frame Intra-chr p11.22 p11.22 Seq+ 34911 ChimerSeq STARFusion TCGA_RNA-Seq STRN3-PRKD1 STRN3 chr14 31495110 - PRKD1 chr14 30194880 - Exonic hg19 LUAD TCGA-44-3918-01A 4 6 In-Frame Intra-chr q12 q12 Seq+ 34912 ChimerSeq STARFusion TCGA_RNA-Seq GSK3B-TMEM31 GSK3B chr3 119595260 - TMEM31 chrX 102967164 + Exonic hg19 LUAD TCGA-44-3918-01A 4 2 CDS-5'UTR Inter-chr q13.33 CMGC:GSK Tumor suppressor gene q22.2 Seq+ 34913 ChimerSeq STARFusion TCGA_RNA-Seq ZNF100-LOC100652909 ZNF100 chr19 21948496 - LOC100652909 chr19 35384360 - Exonic hg19 LUAD TCGA-44-3918-01A 2 3 CDS-3'UTR Intra-chr p12 Transcription factor 34914 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L4A-PLAC8L1 EPB41L4A chr5 111754638 - PLAC8L1 chr5 145477855 - Exonic hg19 LUAD TCGA-55-6543-01A 11 39 Out-of-frame Intra-chr q22.2 q32 Seq+ 34915 ChimerSeq STARFusion TCGA_RNA-Seq TRIM33-RET TRIM33 chr1 114964058 - RET chr10 43612032 + Exonic hg19 LUAD TCGA-55-6543-01A 4 25 In-Frame Inter-chr p13.2 Oncogene q11.21 TK:Ret Oncogene KB Pub Seq+ 34916 ChimerSeq STARFusion TCGA_RNA-Seq MBTD1-PHB MBTD1 chr17 49336504 - PHB chr17 47490653 - Exonic hg19 LUAD TCGA-50-6595-01A 2 4 5'UTR-5'UTR Intra-chr q21.33 q21.33 Tumor suppressor gene Seq+ 34917 ChimerSeq STARFusion TCGA_RNA-Seq CRIM1-FEZ2 CRIM1 chr2 36669878 + FEZ2 chr2 36818154 - Exonic hg19 LUAD TCGA-50-6595-01A 2 1 In-Frame Intra-chr p22.2 p22.2 34918 ChimerSeq STARFusion TCGA_RNA-Seq TTC39C-LAMA3 TTC39C chr18 21663045 + LAMA3 chr18 21526108 + Exonic hg19 LUAD TCGA-49-6745-01A 7 30 In-Frame Intra-chr q11.2 q11.2 Seq+ 34919 ChimerSeq STARFusion TCGA_RNA-Seq UBN1-MGRN1 UBN1 chr16 4925435 + MGRN1 chr16 4731551 + Exonic hg19 LUAD TCGA-49-6745-01A 2 5 In-Frame Intra-chr p13.3 p13.3 Seq+ 34920 ChimerSeq STARFusion TCGA_RNA-Seq INTS4-RSF1 INTS4 chr11 77705636 - RSF1 chr11 77389198 - Exonic hg19 LUAD TCGA-95-8494-01A 3 27 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 34921 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-GYS2 FAM222B chr17 27169700 - GYS2 chr12 21721943 - Exonic hg19 LUAD TCGA-95-8494-01A 2 10 5'UTR-CDS Inter-chr q11.2 p12.1 Seq+ 34922 ChimerSeq STARFusion TCGA_RNA-Seq UHRF1-KDM4B UHRF1 chr19 4932968 + KDM4B chr19 5071021 + Exonic hg19 LUAD TCGA-95-8494-01A 2 7 In-Frame Intra-chr p13.3 p13.3 Seq+ 34923 ChimerSeq STARFusion TCGA_RNA-Seq TPPP-BRD9 TPPP chr5 693393 - BRD9 chr5 880004 - Exonic hg19 LUAD TCGA-95-8494-01A 2 2 5'UTR-CDS Intra-chr p15.33 p15.33 34924 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-ELK2AP GAS6 chr13 114525072 - ELK2AP chr14 106136184 - Exonic hg19 LUAD TCGA-55-6987-01A 52 0 Out-of-frame Inter-chr q34 Oncogene 34925 ChimerSeq STARFusion TCGA_RNA-Seq LRP8-USP24 LRP8 chr1 53792545 - USP24 chr1 55562845 - Exonic hg19 LUAD TCGA-55-6987-01A 4 14 Out-of-frame Intra-chr p32.3 p32.3 Seq+ 34926 ChimerSeq STARFusion TCGA_RNA-Seq TC2N-TRIP11 TC2N chr14 92246920 - TRIP11 chr14 92442533 - Exonic hg19 LUAD TCGA-55-6987-01A 3 15 3'UTR-CDS Intra-chr q32.12 Oncogene Seq+ 34927 ChimerSeq STARFusion TCGA_RNA-Seq CELF1-C1QTNF4 CELF1 chr11 47574544 - C1QTNF4 chr11 47615883 - Exonic hg19 LUAD TCGA-55-6987-01A 4 2 5'UTR-5'UTR Intra-chr p11.2 p11.2 34928 ChimerSeq STARFusion TCGA_RNA-Seq BRWD1-SMC1A BRWD1 chr21 40568424 - SMC1A chrX 53442118 - Exonic hg19 LUAD TCGA-55-6987-01A 2 6 In-Frame Inter-chr q22.2 p11.22 Seq+ 34929 ChimerSeq STARFusion TCGA_RNA-Seq SYNE1-METTL24 SYNE1 chr6 152570296 - METTL24 chr6 110567463 - Exonic hg19 LUAD TCGA-55-6987-01A 3 2 In-Frame Intra-chr q25.2 Oncogene q21 Seq+ 34930 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-CRB3 TANC2 chr17 61345234 + CRB3 chr19 6465556 + Exonic hg19 LUAD TCGA-50-5946-02A 19 136 In-Frame Inter-chr q23.2 p13.3 Seq+ 34931 ChimerSeq STARFusion TCGA_RNA-Seq LOC96610-SLC35E4 LOC96610 chr22 22677323 + SLC35E4 chr22 31042978 + Exonic hg19 LUAD TCGA-50-5946-02A 10 0 Out-of-frame Intra-chr q12.2 34932 ChimerSeq STARFusion TCGA_RNA-Seq LINC00469-DNMT1 LINC00469 chr17 71819827 - DNMT1 chr19 10292753 - Exonic hg19 LUAD TCGA-50-5946-02A 2 3 3'UTR-CDS Inter-chr q25.1 p13.2 Oncogene Tumor suppressor gene Transcription factor 34933 ChimerSeq STARFusion TCGA_RNA-Seq TRIM24-NTRK2 TRIM24 chr7 138258387 + NTRK2 chr9 87482158 + Exonic hg19 LUAD TCGA-55-8091-01A 2 18 In-Frame Inter-chr q33 Oncogene Tumor suppressor gene q21.33 Oncogene Seq+ 34934 ChimerSeq STARFusion TCGA_RNA-Seq FAM131A-PIK3R4 FAM131A chr3 184060648 + PIK3R4 chr3 130454846 - Exonic hg19 LUAD TCGA-55-8091-01A 3 1 In-Frame Intra-chr q27.1 q22.1 Other:VPS15 34935 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 LUAD TCGA-55-8091-01A 2 1 3'UTR-5'UTR Intra-chr q34 34936 ChimerSeq STARFusion TCGA_RNA-Seq APH1A-SLAMF1 APH1A chr1 150239475 - SLAMF1 chr1 160580588 - Exonic hg19 LUAD TCGA-L9-A444-01A 9 100 In-Frame Intra-chr q21.2 q23.3 Seq+ 34937 ChimerSeq STARFusion TCGA_RNA-Seq RP2-C1orf43 RP2 chrX 46696637 + C1orf43 chr1 154187050 - Exonic hg19 LUAD TCGA-L9-A444-01A 10 66 In-Frame Inter-chr p11.3 q21.3 Seq+ 34938 ChimerSeq STARFusion TCGA_RNA-Seq MID1-S100A2 MID1 chrX 10851673 - S100A2 chr1 153536363 - Exonic hg19 LUAD TCGA-L9-A444-01A 2 28 5'UTR-5'UTR Inter-chr p22.2 q21.3 Tumor suppressor gene Seq+ 34939 ChimerSeq STARFusion TCGA_RNA-Seq NOS1AP-ASH1L NOS1AP chr1 162257226 + ASH1L chr1 155452240 - Exonic hg19 LUAD TCGA-L9-A444-01A 2 0 In-Frame Intra-chr q23.3 q22 Transcription factor 34940 ChimerSeq STARFusion TCGA_RNA-Seq SLC12A7-RASGEF1C SLC12A7 chr5 1111983 - RASGEF1C chr5 179565058 - Exonic hg19 LUAD TCGA-95-A4VK-01A 21 48 CDS-5'UTR Intra-chr p15.33 q35.3 Seq+ 34941 ChimerSeq STARFusion TCGA_RNA-Seq ZNF354A-SLC12A7 ZNF354A chr5 178152377 - SLC12A7 chr5 1089243 - Exonic hg19 LUAD TCGA-95-A4VK-01A 3 21 Out-of-frame Intra-chr q35.3 Transcription factor p15.33 Seq+ 34942 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D9B-TENM2 TBC1D9B chr5 179334704 - TENM2 chr5 167302991 + Exonic hg19 LUAD TCGA-95-A4VK-01A 3 15 Out-of-frame Intra-chr q34 Seq+ 34943 ChimerSeq STARFusion TCGA_RNA-Seq SPOCK1-ARHGAP26 SPOCK1 chr5 136834062 - ARHGAP26 chr5 142500553 + Exonic hg19 LUAD TCGA-95-A4VK-01A 5 5 Out-of-frame Intra-chr q31.2 q31.3 Seq+ 34944 ChimerSeq STARFusion TCGA_RNA-Seq ULK2-ACADVL ULK2 chr17 19741814 - ACADVL chr17 7123441 + Exonic hg19 LUAD TCGA-95-A4VK-01A 4 1 Out-of-frame Intra-chr p11.2 Other:ULK p13.1 Seq+ 34945 ChimerSeq STARFusion TCGA_RNA-Seq TNFRSF10D-LOC286059 TNFRSF10D chr8 22995155 - LOC286059 chr8 22939120 + Exonic hg19 LUAD TCGA-44-7671-01A 3 17 Out-of-frame Intra-chr p21.3 34946 ChimerSeq STARFusion TCGA_RNA-Seq SFTPB-SIPA1L3 SFTPB chr2 85892728 - SIPA1L3 chr19 38697883 + Exonic hg19 LUAD TCGA-44-7671-01A 5 4 Out-of-frame Inter-chr p11.2 q13.13 34947 ChimerSeq STARFusion TCGA_RNA-Seq KIF13A-PTPRK KIF13A chr6 17825999 - PTPRK chr6 128718833 - Exonic hg19 LUAD TCGA-44-7671-01A 3 4 In-Frame Intra-chr p22.3 Tumor suppressor gene Seq+ 34948 ChimerSeq STARFusion TCGA_RNA-Seq SPINT2-CYP2B7P1 SPINT2 chr19 38755638 + CYP2B7P1 chr19 41450236 + Exonic hg19 LUAD TCGA-44-7671-01A 2 7 CDS-5'UTR Intra-chr q13.2 Tumor suppressor gene 34949 ChimerSeq STARFusion TCGA_RNA-Seq GATC-SFTPB GATC chr12 120898970 + SFTPB chr2 85885659 - Exonic hg19 LUAD TCGA-44-7671-01A 3 0 Out-of-frame Inter-chr q24.31 p11.2 34950 ChimerSeq STARFusion TCGA_RNA-Seq G2E3-NAP1L1 G2E3 chr14 31050322 + NAP1L1 chr12 76443565 - Exonic hg19 LUAD TCGA-69-7760-01A 4 64 Out-of-frame Inter-chr q12 q21.2 Seq+ 34951 ChimerSeq STARFusion TCGA_RNA-Seq G2E3-NAP1L1 G2E3 chr14 31028478 + NAP1L1 chr12 76443565 - Exonic hg19 LUAD TCGA-69-7760-01A 2 64 5'UTR-CDS Inter-chr q12 q21.2 Seq+ 34952 ChimerSeq STARFusion TCGA_RNA-Seq CAMK2B-KIAA0146 CAMK2B chr7 44364956 - KIAA0146 chr8 48308936 + Exonic hg19 LUAD TCGA-69-7760-01A 3 30 Out-of-frame Inter-chr p13 Seq+ 34953 ChimerSeq STARFusion TCGA_RNA-Seq SIM1-ASCC3 SIM1 chr6 100868666 - ASCC3 chr6 100988263 - Exonic hg19 LUAD TCGA-69-7760-01A 3 5 In-Frame Intra-chr q16.3 Transcription factor q16.3 Seq+ 34954 ChimerSeq STARFusion TCGA_RNA-Seq FNTA-KIAA0146 FNTA chr8 42932507 + KIAA0146 chr8 48192450 + Exonic hg19 LUAD TCGA-69-7760-01A 2 4 Out-of-frame Intra-chr p11.21 Seq+ 34955 ChimerSeq STARFusion TCGA_RNA-Seq SDHB-PLN SDHB chr1 17380443 - PLN chr6 118879988 + Exonic hg19 LUAD TCGA-78-7153-01A 11 18 CDS-5'UTR Inter-chr p36.13 Oncogene Tumor suppressor gene q22.31 Seq+ 34956 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC9-PSKH2 TRAPPC9 chr8 141231558 - PSKH2 chr8 87060996 - Exonic hg19 LUAD TCGA-78-7153-01A 2 44 In-Frame Intra-chr q24.3 q21.3 CAMK:PSK Seq+ 34957 ChimerSeq STARFusion TCGA_RNA-Seq KIF1B-AGTRAP KIF1B chr1 10357304 + AGTRAP chr1 11805860 + Exonic hg19 LUAD TCGA-78-7153-01A 5 22 In-Frame Intra-chr p36.22 Tumor suppressor gene p36.22 Seq+ 34958 ChimerSeq STARFusion TCGA_RNA-Seq FAM49B-PREX2 FAM49B chr8 131028616 - PREX2 chr8 69103957 + Exonic hg19 LUAD TCGA-78-7153-01A 4 12 3'UTR-CDS Intra-chr q24.21 q13.2 Seq+ 34959 ChimerSeq STARFusion TCGA_RNA-Seq FAM49B-TG FAM49B chr8 131028616 - TG chr8 134107288 + Exonic hg19 LUAD TCGA-78-7153-01A 5 1 3'UTR-CDS Intra-chr q24.21 q24.22 34960 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G3-NSUN4 EIF4G3 chr1 21415631 - NSUN4 chr1 46818540 + Exonic hg19 LUAD TCGA-78-7153-01A 2 5 5'UTR-5'UTR Intra-chr p36.12 p33 Seq+ 34961 ChimerSeq STARFusion TCGA_RNA-Seq CCDC174-ECHDC1 CCDC174 chr3 14708454 + ECHDC1 chr6 127611422 - Exonic hg19 LUAD TCGA-78-7153-01A 2 3 Out-of-frame Inter-chr p25.1 q22.33 Seq+ 34962 ChimerSeq STARFusion TCGA_RNA-Seq STK3-ZHX2 STK3 chr8 99761504 - ZHX2 chr8 123963532 + Exonic hg19 LUAD TCGA-78-7153-01A 2 3 CDS-5'UTR Intra-chr q22.2 q24.13 Tumor suppressor gene Transcription factor Seq+ 34963 ChimerSeq STARFusion TCGA_RNA-Seq SFTPB-NAPSA SFTPB chr2 85890792 - NAPSA chr19 50862873 - Exonic hg19 LUAD TCGA-55-8512-01A 3 8 Out-of-frame Inter-chr p11.2 q13.33 34964 ChimerSeq STARFusion TCGA_RNA-Seq STK40-SFTPA1 STK40 chr1 36806541 - SFTPA1 chr10 81373938 + Exonic hg19 LUAD TCGA-55-8512-01A 3 1 Out-of-frame Inter-chr p34.3 q22.3 34965 ChimerSeq STARFusion TCGA_RNA-Seq TRIO-DNAH5 TRIO chr5 14391099 + DNAH5 chr5 13931353 - Exonic hg19 LUAD TCGA-55-7283-01A 2 9 In-Frame Intra-chr p15.2 p15.2 Seq+ 34966 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-LUC7L CREBBP chr16 3828012 - LUC7L chr16 243014 - Exonic hg19 LUAD TCGA-J2-A4AG-01A 3 2 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 34967 ChimerSeq STARFusion TCGA_RNA-Seq EEF1DP3-RB1 EEF1DP3 chr13 32421076 + RB1 chr13 48934153 + Exonic hg19 LUAD TCGA-44-8120-01A 4 0 5'UTR-CDS Intra-chr q13.1 q14.2 Oncogene Tumor suppressor gene 34968 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-SFTPA2 TMPRSS2 chr21 42836636 - SFTPA2 chr10 81316245 - Exonic hg19 LUAD TCGA-38-4626-01A 3 3 Out-of-frame Inter-chr q22.3 q22.3 34969 ChimerSeq STARFusion TCGA_RNA-Seq IL13RA1-WDR44 IL13RA1 chrX 117875119 + WDR44 chrX 117521303 + Exonic hg19 LUAD TCGA-91-8499-01A 40 237 In-Frame Intra-chr q24 q24 Seq+ 34970 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G3-ECE1 EIF4G3 chr1 21415631 - ECE1 chr1 21573856 - Exonic hg19 LUAD TCGA-91-8499-01A 12 43 5'UTR-CDS Intra-chr p36.12 p36.12 Seq+ 34971 ChimerSeq STARFusion TCGA_RNA-Seq FAM162A-CASR FAM162A chr3 122103146 + CASR chr3 121980375 + Exonic hg19 LUAD TCGA-91-8499-01A 9 22 Out-of-frame Intra-chr q21.1 q13.33 Seq+ 34972 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-SAG DGKD chr2 234299129 + SAG chr2 234217808 + Exonic hg19 LUAD TCGA-91-8499-01A 4 30 CDS-5'UTR Intra-chr Seq+ 34973 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-SAG DGKD chr2 234299129 + SAG chr2 234224721 + Exonic hg19 LUAD TCGA-91-8499-01A 2 30 In-Frame Intra-chr Seq+ 34974 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF10L-PADI4 ARHGEF10L chr1 17991090 + PADI4 chr1 17657464 + Exonic hg19 LUAD TCGA-91-8499-01A 3 12 Out-of-frame Intra-chr p36.13 Seq+ 34975 ChimerSeq STARFusion TCGA_RNA-Seq MRPS7-GGA3 MRPS7 chr17 73259588 + GGA3 chr17 73242877 - Exonic hg19 LUAD TCGA-91-8499-01A 3 7 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 34976 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D5-ANKRD28 TBC1D5 chr3 17783973 - ANKRD28 chr3 15793327 - Exonic hg19 LUAD TCGA-91-8499-01A 3 2 5'UTR-5'UTR Intra-chr p24.3 p25.1 Seq+ 34977 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-ELK2AP GAS6 chr13 114525072 - ELK2AP chr14 106136184 - Exonic hg19 LUAD TCGA-91-8499-01A 3 0 Out-of-frame Inter-chr q34 Oncogene 34978 ChimerSeq STARFusion TCGA_RNA-Seq CHST9-BBS9 CHST9 chr18 24722653 - BBS9 chr7 33388680 + Exonic hg19 LUAD TCGA-91-8499-01A 2 1 Out-of-frame Inter-chr q11.2 p14.3 34979 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ADCY6 IGH@ chr14 107210931 - ADCY6 chr12 49164890 - Exonic hg19 LUAD TCGA-L9-A743 149 0 Out-of-frame Inter-chr 32.33 q13.12 34980 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ADCY6 IGH@ chr14 107183398 - ADCY6 chr12 49164891 - Exonic hg19 LUAD TCGA-L9-A743 148 1 Out-of-frame Inter-chr 32.33 q13.12 34981 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ADCY6 IGH@ chr14 107169931 - ADCY6 chr12 49164891 - Exonic hg19 LUAD TCGA-L9-A743 147 0 Out-of-frame Inter-chr 32.33 q13.12 34982 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ADCY6 IGH@ chr14 107122095 - ADCY6 chr12 49164891 - Exonic hg19 LUAD TCGA-L9-A743 146 0 Out-of-frame Inter-chr 32.33 q13.12 34983 ChimerSeq STARFusion TCGA_RNA-Seq PPRC1-IGKC PPRC1 chr10 103901439 + IGKC chr2 89157197 - Exonic hg19 LUAD TCGA-L9-A743 106 1 Out-of-frame Inter-chr q24.32 p11.2 34984 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG3 STK25 chr2 242434915 - IGHG3 chr14 106237745 - Exonic hg19 LUAD TCGA-L9-A743 92 1 Out-of-frame Inter-chr q37.3 34985 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ADCY6 IGH@ chr14 107198932 - ADCY6 chr12 49164891 - Exonic hg19 LUAD TCGA-L9-A743 21 0 Out-of-frame Inter-chr 32.33 q13.12 34986 ChimerSeq STARFusion TCGA_RNA-Seq ZNF439-IGL@ ZNF439 chr19 11994410 + IGL@ chr22 23247168 + Exonic hg19 LUAD TCGA-L9-A743 12 0 Out-of-frame Inter-chr p13.2 Transcription factor q11.22 34987 ChimerSeq STARFusion TCGA_RNA-Seq ZNF439-IGLC3 ZNF439 chr19 11994410 + IGLC3 chr22 23247168 + Exonic hg19 LUAD TCGA-L9-A743 12 0 Out-of-frame Inter-chr p13.2 Transcription factor q11.22 34988 ChimerSeq STARFusion TCGA_RNA-Seq ZNF439-IGLJ3 ZNF439 chr19 11994410 + IGLJ3 chr22 23247168 + Exonic hg19 LUAD TCGA-L9-A743 12 0 Out-of-frame Inter-chr p13.2 Transcription factor q11.22 34989 ChimerSeq STARFusion TCGA_RNA-Seq PDXDC2P-PDPR PDXDC2P chr16 70065803 - PDPR chr16 70190640 + Exonic hg19 LUAD TCGA-L9-A743 6 23 3'UTR-CDS Intra-chr q22.1 q22.1 34990 ChimerSeq STARFusion TCGA_RNA-Seq SEC61A2-IGH@ SEC61A2 chr10 12171768 + IGH@ chr14 106330462 - Exonic hg19 LUAD TCGA-L9-A743 9 0 Out-of-frame Inter-chr p14 32.33 34991 ChimerSeq STARFusion TCGA_RNA-Seq SEC61A2-IGHG3 SEC61A2 chr10 12171768 + IGHG3 chr14 106330462 - Exonic hg19 LUAD TCGA-L9-A743 9 0 Out-of-frame Inter-chr p14 34992 ChimerSeq STARFusion TCGA_RNA-Seq SEC61A2-IGHJ4 SEC61A2 chr10 12171768 + IGHJ4 chr14 106330462 - Exonic hg19 LUAD TCGA-L9-A743 9 0 Out-of-frame Inter-chr p14 Seq+ 34993 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61665880 - ANK3 chr10 61789584 - Exonic hg19 LUAD TCGA-64-5815-01A 2 7 CDS-3'UTR Intra-chr q21.2 q21.2 Seq+ 34994 ChimerSeq STARFusion TCGA_RNA-Seq BTBD7-GOLGA5 BTBD7 chr14 93799166 - GOLGA5 chr14 93263753 + Exonic hg19 LUAD TCGA-55-8208-01A 2 3 5'UTR-5'UTR Intra-chr q32.12 34995 ChimerSeq STARFusion TCGA_RNA-Seq TFDP1-CUL4A TFDP1 chr13 114265377 + CUL4A chr13 113873259 + Exonic hg19 LUAD TCGA-55-8621-01A 3 3 Out-of-frame Intra-chr q34 Transcription factor q34 Seq+ 34996 ChimerSeq STARFusion TCGA_RNA-Seq BMPR2-KANSL1L BMPR2 chr2 203242273 + KANSL1L chr2 210962931 - Exonic hg19 LUAD TCGA-78-7539-01A 11 38 3'UTR-CDS Intra-chr q33.1 TKL:STKR Tumor suppressor gene q34 Seq+ 34997 ChimerSeq STARFusion TCGA_RNA-Seq THBS3-HDGF THBS3 chr1 155175991 - HDGF chr1 156715165 - Exonic hg19 LUAD TCGA-78-7539-01A 3 5 Out-of-frame Intra-chr q22 q23.1 Seq+ 34998 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD17-SQRDL ANKRD17 chr4 74123993 - SQRDL chr15 45951105 + Exonic hg19 LUAD TCGA-78-7539-01A 3 3 CDS-5'UTR Inter-chr q13.3 Seq+ 34999 ChimerSeq STARFusion TCGA_RNA-Seq NINL-GBAS NINL chr20 25477299 - GBAS chr7 56051421 + Exonic hg19 LUAD TCGA-78-7539-01A 2 7 Out-of-frame Inter-chr p11.21 Seq+ 35000 ChimerSeq STARFusion TCGA_RNA-Seq GLS-RPL14 GLS chr2 191745591 + RPL14 chr3 40503542 + Exonic hg19 LUAD TCGA-78-7539-01A 3 1 Out-of-frame Inter-chr q32.2 Tumor suppressor gene p22.1 35001 ChimerSeq STARFusion TCGA_RNA-Seq SDC4-NRG1 SDC4 chr20 43959006 - NRG1 chr8 32585467 + Exonic hg19 LUAD TCGA-86-7954-01A 1092 5223 In-Frame Inter-chr q13.12 p12 KB Pub Seq+ 35002 ChimerSeq STARFusion TCGA_RNA-Seq KDM6A-METTL20 KDM6A chrX 44733233 + METTL20 chr12 31814775 + Exonic hg19 LUAD TCGA-86-7954-01A 57 89 CDS-5'UTR Inter-chr p11.3 Oncogene Tumor suppressor gene Seq+ 35003 ChimerSeq STARFusion TCGA_RNA-Seq USP32-HOXB9 USP32 chr17 58332536 - HOXB9 chr17 46699461 - Exonic hg19 LUAD TCGA-86-7954-01A 9 102 CDS-3'UTR Intra-chr q23.2 q21.32 Transcription factor Seq+ 35004 ChimerSeq STARFusion TCGA_RNA-Seq TRA2A-EPDR1 TRA2A chr7 23571408 - EPDR1 chr7 37988442 + Exonic hg19 LUAD TCGA-86-7954-01A 19 49 Out-of-frame Intra-chr p15.3 p14.1 Seq+ 35005 ChimerSeq STARFusion TCGA_RNA-Seq USP32-HOXB9 USP32 chr17 58331098 - HOXB9 chr17 46700359 - Exonic hg19 LUAD TCGA-86-7954-01A 4 102 Out-of-frame Intra-chr q23.2 q21.32 Transcription factor Seq+ 35006 ChimerSeq STARFusion TCGA_RNA-Seq USP9X-KDM6A USP9X chrX 41031211 + KDM6A chrX 44870206 + Exonic hg19 LUAD TCGA-86-7954-01A 22 27 Out-of-frame Intra-chr p11.4 Oncogene p11.3 Oncogene Tumor suppressor gene Seq+ 35007 ChimerSeq STARFusion TCGA_RNA-Seq TRA2A-EPDR1 TRA2A chr7 23571408 - EPDR1 chr7 37989802 + Exonic hg19 LUAD TCGA-86-7954-01A 10 49 Out-of-frame Intra-chr p15.3 p14.1 Seq+ 35008 ChimerSeq STARFusion TCGA_RNA-Seq RBM10-CMAS RBM10 chrX 47006897 + CMAS chr12 22208083 + Exonic hg19 LUAD TCGA-86-7954-01A 8 32 In-Frame Inter-chr p11.3 p12.1 Seq+ 35009 ChimerSeq STARFusion TCGA_RNA-Seq ESYT1-MED14 ESYT1 chr12 56532797 + MED14 chrX 40514312 - Exonic hg19 LUAD TCGA-86-7954-01A 5 31 In-Frame Inter-chr q13.2 p11.4 Seq+ 35010 ChimerSeq STARFusion TCGA_RNA-Seq MTAP-POC1B MTAP chr9 21802780 + POC1B chr12 89885892 - Exonic hg19 LUAD TCGA-86-7954-01A 5 15 Out-of-frame Inter-chr p21.3 Tumor suppressor gene q21.33 Seq+ 35011 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 LUAD TCGA-86-7954-01A 5 14 3'UTR-5'UTR Intra-chr q34 35012 ChimerSeq STARFusion TCGA_RNA-Seq ST8SIA1-ABCC9 ST8SIA1 chr12 22408214 - ABCC9 chr12 21981994 - Exonic hg19 LUAD TCGA-86-7954-01A 3 13 In-Frame Intra-chr p12.1 p12.1 Seq+ 35013 ChimerSeq STARFusion TCGA_RNA-Seq CHD6-ABHD12 CHD6 chr20 40141485 - ABHD12 chr20 25304066 - Exonic hg19 LUAD TCGA-86-7954-01A 2 12 Out-of-frame Intra-chr q12 p11.21 Seq+ 35014 ChimerSeq STARFusion TCGA_RNA-Seq CASC1-PLEKHA5 CASC1 chr12 25348010 - PLEKHA5 chr12 19406874 + Exonic hg19 LUAD TCGA-86-7954-01A 3 3 Out-of-frame Intra-chr p12.1 Tumor suppressor gene p12.3 Seq+ 35015 ChimerSeq STARFusion TCGA_RNA-Seq PDXDC1-NPIP PDXDC1 chr16 15123913 + NPIP chr16 15043907 + Exonic hg19 LUAD TCGA-64-5778-01A 5 88 Out-of-frame Intra-chr p13.11 35016 ChimerSeq STARFusion TCGA_RNA-Seq SPINT2-LGALS7 SPINT2 chr19 38778575 + LGALS7 chr19 39263743 - Exonic hg19 LUAD TCGA-64-5778-01A 11 24 Out-of-frame Intra-chr q13.2 Tumor suppressor gene Tumor suppressor gene 35017 ChimerSeq STARFusion TCGA_RNA-Seq PDXDC2P-PKD1P1 PDXDC2P chr16 70044654 - PKD1P1 chr16 16442384 + Exonic hg19 LUAD TCGA-64-5778-01A 6 2 3'UTR-5'UTR Intra-chr q22.1 35018 ChimerSeq STARFusion TCGA_RNA-Seq C3orf27-SCNM1 C3orf27 chr3 128294109 - SCNM1 chr1 151138947 + Exonic hg19 LUAD TCGA-64-5778-01A 2 0 5'UTR-5'UTR Inter-chr q21.3 35019 ChimerSeq STARFusion TCGA_RNA-Seq KIF16B-RRBP1 KIF16B chr20 16506737 - RRBP1 chr20 17641173 - Exonic hg19 LUAD TCGA-44-3919-01A 4 5 CDS-5'UTR Intra-chr p12.1 p12.1 Seq+ 35020 ChimerSeq STARFusion TCGA_RNA-Seq GSS-ACSS2 GSS chr20 33543530 - ACSS2 chr20 33513501 + Exonic hg19 LUAD TCGA-44-3919-01A 2 2 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 35021 ChimerSeq STARFusion TCGA_RNA-Seq PTCSC3-MBIP PTCSC3 chr14 36631830 - MBIP chr14 36770029 - Exonic hg19 LUAD TCGA-05-5423-01A 6 30 Out-of-frame Intra-chr q13.3 Tumor suppressor gene q13.3 35022 ChimerSeq STARFusion TCGA_RNA-Seq TRMT11-HINT3 TRMT11 chr6 126307768 + HINT3 chr6 126288033 + Exonic hg19 LUAD TCGA-05-5423-01A 7 15 In-Frame Intra-chr q22.32 q22.32 Seq+ 35023 ChimerSeq STARFusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23739998 - APOO chrX 23899069 - Exonic hg19 LUAD TCGA-05-5423-01A 2 10 In-Frame Intra-chr p22.11 p22.11 Seq+ 35024 ChimerSeq STARFusion TCGA_RNA-Seq NUP153-KIF13A NUP153 chr6 17688627 - KIF13A chr6 17817464 - Exonic hg19 LUAD TCGA-05-5423-01A 3 0 In-Frame Intra-chr p22.3 p22.3 35025 ChimerSeq STARFusion TCGA_RNA-Seq HIPK3-CAT HIPK3 chr11 33373811 + CAT chr11 34470739 + Exonic hg19 LUAD TCGA-55-8510-01A 2 7 In-Frame Intra-chr p13 CMGC:DYRK p13 Tumor suppressor gene Seq+ 35026 ChimerSeq STARFusion TCGA_RNA-Seq CD74-ROS1 CD74 chr5 149784243 - ROS1 chr6 117645578 - Exonic hg19 LUAD TCGA-64-1680-01A 68 224 In-Frame Inter-chr q33.1 q22.1 Oncogene KB Pub Seq+ 35027 ChimerSeq STARFusion TCGA_RNA-Seq FBXO9-CD74 FBXO9 chr6 52960462 + CD74 chr5 149782188 - Exonic hg19 LUAD TCGA-64-1680-01A 22 110 Out-of-frame Inter-chr p12.1 q33.1 Seq+ 35028 ChimerSeq STARFusion TCGA_RNA-Seq DHX40-VMP1 DHX40 chr17 57657240 + VMP1 chr17 57915656 + Exonic hg19 LUAD TCGA-64-1680-01A 2 19 In-Frame Intra-chr q23.1 q23.1 Seq+ 35029 ChimerSeq STARFusion TCGA_RNA-Seq SFTPB-B3GNTL1 SFTPB chr2 85888577 - B3GNTL1 chr17 81006661 - Exonic hg19 LUAD TCGA-64-1680-01A 2 1 3'UTR-CDS Inter-chr p11.2 35030 ChimerSeq STARFusion TCGA_RNA-Seq BAZ1A-LOC100507412 BAZ1A chr14 35331250 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LUAD TCGA-55-7903-01A 32 289 CDS-5'UTR Inter-chr q13.2 35031 ChimerSeq STARFusion TCGA_RNA-Seq FZR1-NCLN FZR1 chr19 3523056 + NCLN chr19 3201521 + Exonic hg19 LUAD TCGA-55-7903-01A 6 48 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 35032 ChimerSeq STARFusion TCGA_RNA-Seq SHC1-ASH1L SHC1 chr1 154946724 - ASH1L chr1 155309159 - Exonic hg19 LUAD TCGA-55-7903-01A 2 52 5'UTR-CDS Intra-chr q21.3 q22 Transcription factor Seq+ 35033 ChimerSeq STARFusion TCGA_RNA-Seq RQCD1-ARPC2 RQCD1 chr2 219433701 + ARPC2 chr2 219099075 + Exonic hg19 LUAD TCGA-55-7903-01A 3 20 In-Frame Intra-chr q35 Seq+ 35034 ChimerSeq STARFusion TCGA_RNA-Seq TRIB1-NSMCE2 TRIB1 chr8 126445851 + NSMCE2 chr8 126369461 + Exonic hg19 LUAD TCGA-55-7903-01A 3 12 Out-of-frame Intra-chr q24.13 q24.13 Seq+ 35035 ChimerSeq STARFusion TCGA_RNA-Seq MTHFR-TP53I11 MTHFR chr1 11847425 - TP53I11 chr11 44955996 - Exonic hg19 LUAD TCGA-55-7903-01A 3 1 Out-of-frame Inter-chr p36.22 p11.2 35036 ChimerSeq STARFusion TCGA_RNA-Seq ASH1L-YY1AP1 ASH1L chr1 155490891 - YY1AP1 chr1 155631214 - Exonic hg19 LUAD TCGA-55-7903-01A 2 3 In-Frame Intra-chr q22 Transcription factor q22 Seq+ 35037 ChimerSeq STARFusion TCGA_RNA-Seq AGFG1-MFF AGFG1 chr2 228395926 + MFF chr2 228211942 + Exonic hg19 LUAD TCGA-62-A471-01A 23 347 Out-of-frame Intra-chr q36.3 q36.3 Seq+ 35038 ChimerSeq STARFusion TCGA_RNA-Seq AGFG1-MFF AGFG1 chr2 228389631 + MFF chr2 228220393 + Exonic hg19 LUAD TCGA-62-A471-01A 10 347 Out-of-frame Intra-chr q36.3 q36.3 Seq+ 35039 ChimerSeq STARFusion TCGA_RNA-Seq AGFG1-MFF AGFG1 chr2 228395926 + MFF chr2 228220393 + Exonic hg19 LUAD TCGA-62-A471-01A 5 347 Out-of-frame Intra-chr q36.3 q36.3 Seq+ 35040 ChimerSeq STARFusion TCGA_RNA-Seq ZNF727-SND1 ZNF727 chr7 63506002 + SND1 chr7 127714554 + Exonic hg19 LUAD TCGA-55-7995-01A 57 89 In-Frame Intra-chr q11.21 Transcription factor q32.1 Seq+ 35041 ChimerSeq STARFusion TCGA_RNA-Seq TRABD-LOC100507412 TRABD chr22 50633469 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LUAD TCGA-55-7995-01A 7 51 CDS-5'UTR Inter-chr q13.33 35042 ChimerSeq STARFusion TCGA_RNA-Seq TRABD-LOC100507412 TRABD chr22 50633472 + LOC100507412 chrUn_gl000220 121603 + Exonic hg19 LUAD TCGA-55-7995-01A 3 51 Out-of-frame Inter-chr q13.33 35043 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 LUAD TCGA-55-7995-01A 9 10 3'UTR-5'UTR Intra-chr q34 35044 ChimerSeq STARFusion TCGA_RNA-Seq XRCC2-ACTR3C XRCC2 chr7 152373126 - ACTR3C chr7 149946143 - Exonic hg19 LUAD TCGA-55-7995-01A 6 5 In-Frame Intra-chr q36.1 Oncogene q36.1 Seq+ 35045 ChimerSeq STARFusion TCGA_RNA-Seq TFDP1-CUL4A TFDP1 chr13 114265377 + CUL4A chr13 113873259 + Exonic hg19 LUAD TCGA-55-8620-01A 858 2198 Out-of-frame Intra-chr q34 Transcription factor q34 Seq+ 35046 ChimerSeq STARFusion TCGA_RNA-Seq MED25-SIGLEC12 MED25 chr19 50322553 + SIGLEC12 chr19 51995083 - Exonic hg19 LUAD TCGA-55-8620-01A 26 56 Out-of-frame Intra-chr q13.33 q13.41 Seq+ 35047 ChimerSeq STARFusion TCGA_RNA-Seq ATP11A-CAPZA2 ATP11A chr13 113516889 + CAPZA2 chr7 116544231 + Exonic hg19 LUAD TCGA-55-8620-01A 15 47 In-Frame Inter-chr q34 q31.2 35048 ChimerSeq STARFusion TCGA_RNA-Seq CAPZA2-GRTP1 CAPZA2 chr7 116502704 + GRTP1 chr13 114005288 - Exonic hg19 LUAD TCGA-55-8620-01A 3 22 Out-of-frame Inter-chr q31.2 q34 35049 ChimerSeq STARFusion TCGA_RNA-Seq CAPZA2-GAS6 CAPZA2 chr7 116502704 + GAS6 chr13 114526523 - Exonic hg19 LUAD TCGA-55-8620-01A 2 21 Out-of-frame Inter-chr q31.2 q34 Oncogene 35050 ChimerSeq STARFusion TCGA_RNA-Seq TFDP1-PCID2 TFDP1 chr13 114240164 + PCID2 chr13 113839874 - Exonic hg19 LUAD TCGA-55-8620-01A 2 19 Out-of-frame Intra-chr q34 Transcription factor q34 Seq+ 35051 ChimerSeq STARFusion TCGA_RNA-Seq TFDP1-PCID2 TFDP1 chr13 114240164 + PCID2 chr13 113849439 - Exonic hg19 LUAD TCGA-55-8620-01A 2 19 Out-of-frame Intra-chr q34 Transcription factor q34 Seq+ 35052 ChimerSeq STARFusion TCGA_RNA-Seq TMCO3-ST7 TMCO3 chr13 114145588 + ST7 chr7 116739816 + Exonic hg19 LUAD TCGA-55-8620-01A 4 11 5'UTR-CDS Inter-chr q34 q31.2 Tumor suppressor gene Seq+ 35053 ChimerSeq STARFusion TCGA_RNA-Seq DCUN1D2-TMCO3 DCUN1D2 chr13 114144982 - TMCO3 chr13 114193672 + Exonic hg19 LUAD TCGA-55-8620-01A 4 8 In-Frame Intra-chr q34 q34 Seq+ 35054 ChimerSeq STARFusion TCGA_RNA-Seq PCID2-TMCO3 PCID2 chr13 113845186 - TMCO3 chr13 114201615 + Exonic hg19 LUAD TCGA-55-8620-01A 3 8 Out-of-frame Intra-chr q34 q34 Seq+ 35055 ChimerSeq STARFusion TCGA_RNA-Seq AKAP8L-BRD4 AKAP8L chr19 15507961 - BRD4 chr19 15383944 - Exonic hg19 LUAD TCGA-55-8620-01A 3 4 CDS-5'UTR Intra-chr p13.12 Transcription factor p13.12 Atypical:BRD Seq+ 35056 ChimerSeq STARFusion TCGA_RNA-Seq DCUN1D2-TMCO3 DCUN1D2 chr13 114144982 - TMCO3 chr13 114202618 + Exonic hg19 LUAD TCGA-55-8620-01A 2 8 In-Frame Intra-chr q34 q34 Seq+ 35057 ChimerSeq STARFusion TCGA_RNA-Seq DCUN1D2-TMCO3 DCUN1D2 chr13 114144982 - TMCO3 chr13 114201615 + Exonic hg19 LUAD TCGA-55-8620-01A 2 8 Out-of-frame Intra-chr q34 q34 Seq+ 35058 ChimerSeq STARFusion TCGA_RNA-Seq TMEM132D-RALGAPA2 TMEM132D chr12 130015604 - RALGAPA2 chr20 20392792 - Exonic hg19 LUAD TCGA-55-8620-01A 2 6 In-Frame Inter-chr q24.33 p11.23 Seq+ 35059 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KC1-SDCCAG8 RPS6KC1 chr1 213244383 + SDCCAG8 chr1 243493842 + Exonic hg19 LUAD TCGA-55-8620-01A 2 4 In-Frame Intra-chr q32.3 Seq+ 35060 ChimerSeq STARFusion TCGA_RNA-Seq MORF4L2-GLRA4 MORF4L2 chrX 102933427 - GLRA4 chrX 102974199 - Exonic hg19 LUAD TCGA-44-7660-01A 58 167 5'UTR-CDS Intra-chr q22.2 q22.2 Seq+ 35061 ChimerSeq STARFusion TCGA_RNA-Seq MYO1E-BNIP2 MYO1E chr15 59664697 - BNIP2 chr15 59963513 - Exonic hg19 LUAD TCGA-44-7660-01A 34 186 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 35062 ChimerSeq STARFusion TCGA_RNA-Seq MYO1E-BNIP2 MYO1E chr15 59664697 - BNIP2 chr15 59956319 - Exonic hg19 LUAD TCGA-44-7660-01A 17 186 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 35063 ChimerSeq STARFusion TCGA_RNA-Seq MORF4L2-GLRA4 MORF4L2 chrX 102933427 - GLRA4 chrX 102974577 - Exonic hg19 LUAD TCGA-44-7660-01A 6 167 5'UTR-CDS Intra-chr q22.2 q22.2 Seq+ 35064 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2B-NUP210L GATAD2B chr1 153895209 - NUP210L chr1 153982597 - Exonic hg19 LUAD TCGA-44-7660-01A 7 31 5'UTR-CDS Intra-chr Transcription factor q21.3 Seq+ 35065 ChimerSeq STARFusion TCGA_RNA-Seq RAB14-STOM RAB14 chr9 123963917 - STOM chr9 124111601 - Exonic hg19 LUAD TCGA-44-7660-01A 9 12 5'UTR-CDS Intra-chr q33.2 q33.2 Seq+ 35066 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2B-NUP210L GATAD2B chr1 153895209 - NUP210L chr1 153984846 - Exonic hg19 LUAD TCGA-44-7660-01A 3 31 5'UTR-CDS Intra-chr Transcription factor q21.3 Seq+ 35067 ChimerSeq STARFusion TCGA_RNA-Seq PDE4D-ELOVL7 PDE4D chr5 59481384 - ELOVL7 chr5 60050660 - Exonic hg19 LUAD TCGA-44-7660-01A 6 10 In-Frame Intra-chr q12.1 q12.1 Seq+ 35068 ChimerSeq STARFusion TCGA_RNA-Seq RICTOR-FYB RICTOR chr5 39021141 - FYB chr5 39110491 - Exonic hg19 LUAD TCGA-44-7660-01A 5 9 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 35069 ChimerSeq STARFusion TCGA_RNA-Seq ARRB1-KLHL35 ARRB1 chr11 75062632 - KLHL35 chr11 75137683 - Exonic hg19 LUAD TCGA-44-7660-01A 2 20 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 35070 ChimerSeq STARFusion TCGA_RNA-Seq RSL24D1-RAB27A RSL24D1 chr15 55489008 - RAB27A chr15 55527154 - Exonic hg19 LUAD TCGA-44-7660-01A 3 15 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 35071 ChimerSeq STARFusion TCGA_RNA-Seq ATF6-PCP4L1 ATF6 chr1 161772062 + PCP4L1 chr1 161253458 + Exonic hg19 LUAD TCGA-44-7660-01A 4 9 In-Frame Intra-chr q23.3 Transcription factor q23.3 Seq+ 35072 ChimerSeq STARFusion TCGA_RNA-Seq G3BP2-NAAA G3BP2 chr4 76598392 - NAAA chr4 76832506 - Exonic hg19 LUAD TCGA-44-7660-01A 3 12 5'UTR-CDS Intra-chr q21.1 q21.1 Seq+ 35073 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 LUAD TCGA-44-7660-01A 4 8 3'UTR-5'UTR Intra-chr q34 35074 ChimerSeq STARFusion TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105561040 - OBFC1 chr10 105664914 - Exonic hg19 LUAD TCGA-44-7660-01A 3 11 Out-of-frame Intra-chr q24.33 Seq+ 35075 ChimerSeq STARFusion TCGA_RNA-Seq TMC6-DNAH17 TMC6 chr17 76120070 - DNAH17 chr17 76496543 - Exonic hg19 LUAD TCGA-44-7660-01A 5 3 In-Frame Intra-chr q25.3 q25.3 Seq+ 35076 ChimerSeq STARFusion TCGA_RNA-Seq ACVR1-CCDC148 ACVR1 chr2 158674897 - CCDC148 chr2 159035508 - Exonic hg19 LUAD TCGA-44-7660-01A 4 6 5'UTR-CDS Intra-chr q24.1 q24.1 Seq+ 35077 ChimerSeq STARFusion TCGA_RNA-Seq G3BP2-NAAA G3BP2 chr4 76598392 - NAAA chr4 76841128 - Exonic hg19 LUAD TCGA-44-7660-01A 2 12 5'UTR-CDS Intra-chr q21.1 q21.1 Seq+ 35078 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D22A-RIBC2 TBC1D22A chr22 47290742 + RIBC2 chr22 45826780 + Exonic hg19 LUAD TCGA-44-7660-01A 2 9 In-Frame Intra-chr q13.31 q13.31 Seq+ 35079 ChimerSeq STARFusion TCGA_RNA-Seq SZT2-EIF2B3 SZT2 chr1 43898110 + EIF2B3 chr1 45446849 - Exonic hg19 LUAD TCGA-44-7660-01A 2 7 CDS-5'UTR Intra-chr p34.2 p34.1 Seq+ 35080 ChimerSeq STARFusion TCGA_RNA-Seq GTSE1-ATXN10 GTSE1 chr22 46719159 + ATXN10 chr22 46085592 + Exonic hg19 LUAD TCGA-44-7660-01A 2 6 In-Frame Intra-chr q13.31 q13.31 Seq+ 35081 ChimerSeq STARFusion TCGA_RNA-Seq NUP85-CDR2L NUP85 chr17 73222252 + CDR2L chr17 72995599 + Exonic hg19 LUAD TCGA-44-7660-01A 3 1 Out-of-frame Intra-chr q25.1 q25.1 35082 ChimerSeq STARFusion TCGA_RNA-Seq AFAP1-ABLIM2 AFAP1 chr4 7941383 - ABLIM2 chr4 7986620 - Exonic hg19 LUAD TCGA-44-7660-01A 2 1 5'UTR-CDS Intra-chr p16.1 p16.1 Seq+ 35083 ChimerSeq STARFusion TCGA_RNA-Seq SH3GL1-DPP9 SH3GL1 chr19 4400321 - DPP9 chr19 4685783 - Exonic hg19 LUAD TCGA-44-7660-01A 2 1 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 35084 ChimerSeq STARFusion TCGA_RNA-Seq ADAM9-HTRA4 ADAM9 chr8 38884329 + HTRA4 chr8 38845455 + Exonic hg19 LUAD TCGA-44-7660-01A 2 0 In-Frame Intra-chr p11.22 Seq+ 35085 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD30BP2-ACACA ANKRD30BP2 chr21 14433204 + ACACA chr17 35454919 - Exonic hg19 LUAD TCGA-44-6145-01A 3 18 5'UTR-CDS Inter-chr q11.2 Seq+ 35086 ChimerSeq STARFusion TCGA_RNA-Seq SAMHD1-SCAND1 SAMHD1 chr20 35580018 - SCAND1 chr20 34543018 - Exonic hg19 LUAD TCGA-44-7661-01A 4 11 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 35087 ChimerSeq STARFusion TCGA_RNA-Seq POMT1-NUP214 POMT1 chr9 134378460 + NUP214 chr9 134090599 + Exonic hg19 LUAD TCGA-50-5941-01A 3 19 5'UTR-CDS Intra-chr q34.13 q34.13 Oncogene Seq+ 35088 ChimerSeq STARFusion TCGA_RNA-Seq PDE9A-ABCG1 PDE9A chr21 44073993 + ABCG1 chr21 43645781 + Exonic hg19 LUAD TCGA-50-5941-01A 3 18 In-Frame Intra-chr q22.3 q22.3 Seq+ 35089 ChimerSeq STARFusion TCGA_RNA-Seq STK24-TRIQK STK24 chr13 99228999 - TRIQK chr8 93929238 - Exonic hg19 LUAD TCGA-50-5941-01A 2 9 CDS-5'UTR Inter-chr q32.2 q22.1 Seq+ 35090 ChimerSeq STARFusion TCGA_RNA-Seq LCOR-PNLIPRP3 LCOR chr10 98593236 + PNLIPRP3 chr10 118202567 + Exonic hg19 LUAD TCGA-50-5941-01A 2 5 5'UTR-CDS Intra-chr q24.1 Transcription factor q25.3 Seq+ 35091 ChimerSeq STARFusion TCGA_RNA-Seq BIN3-PEBP4 BIN3 chr8 22502268 - PEBP4 chr8 22571049 - Exonic hg19 LUAD TCGA-MN-A4N1-01A 55 263 Out-of-frame Intra-chr p21.3 p21.3 Seq+ 35092 ChimerSeq STARFusion TCGA_RNA-Seq ORAOV1-NARS2 ORAOV1 chr11 69487984 - NARS2 chr11 78282489 - Exonic hg19 LUAD TCGA-MN-A4N1-01A 9 38 In-Frame Intra-chr q13.3 q14.1 Seq+ 35093 ChimerSeq STARFusion TCGA_RNA-Seq POLD3-TENM4 POLD3 chr11 74331134 + TENM4 chr11 78781054 - Exonic hg19 LUAD TCGA-MN-A4N1-01A 9 17 Out-of-frame Intra-chr q13.4 q14.1 Seq+ 35094 ChimerSeq STARFusion TCGA_RNA-Seq ATP11A-C13orf35 ATP11A chr13 113439571 + C13orf35 chr13 113337588 + Exonic hg19 LUAD TCGA-MN-A4N1-01A 3 11 Out-of-frame Intra-chr q34 Seq+ 35095 ChimerSeq STARFusion TCGA_RNA-Seq EML4-ALK EML4 chr2 42491871 + ALK chr2 29446394 - Exonic hg19 LUAD TCGA-67-6215-01A 28 55 In-Frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 35096 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 LUAD TCGA-67-6215-01A 2 5 3'UTR-5'UTR Intra-chr q34 35097 ChimerSeq STARFusion TCGA_RNA-Seq PXN-MSI1 PXN chr12 120703420 - MSI1 chr12 120802558 - Exonic hg19 LUAD TCGA-55-7570-01A 2 4 Out-of-frame Intra-chr q24.23 q24.31 Seq+ 35098 ChimerSeq STARFusion TCGA_RNA-Seq CASP4-USP28 CASP4 chr11 104839246 - USP28 chr11 113688559 - Exonic hg19 LUAD TCGA-55-7570-01A 2 2 Out-of-frame Intra-chr q22.3 q23.2 35099 ChimerSeq STARFusion TCGA_RNA-Seq PPIP5K1-CATSPER2 PPIP5K1 chr15 43860661 - CATSPER2 chr15 43924561 - Exonic hg19 LUAD TCGA-86-8076-01A 2 4 In-Frame Intra-chr q15.3 q15.3 35100 ChimerSeq STARFusion TCGA_RNA-Seq PNPLA2-RPLP2 PNPLA2 chr11 818958 + RPLP2 chr11 810234 + Exonic hg19 LUAD TCGA-73-4658-01A 18 9 5'UTR-5'UTR Intra-chr p15.5 p15.5 35101 ChimerSeq STARFusion TCGA_RNA-Seq LRP5-VPS26B LRP5 chr11 68181480 + VPS26B chr11 134114832 + Exonic hg19 LUAD TCGA-73-4658-01A 7 37 In-Frame Intra-chr q13.2 q25 Seq+ 35102 ChimerSeq STARFusion TCGA_RNA-Seq PNPLA2-RPLP2 PNPLA2 chr11 818958 + RPLP2 chr11 809992 + Exonic hg19 LUAD TCGA-73-4658-01A 11 9 5'UTR-5'UTR Intra-chr p15.5 p15.5 35103 ChimerSeq STARFusion TCGA_RNA-Seq SIK3-CD3D SIK3 chr11 116968859 - CD3D chr11 118210209 - Exonic hg19 LUAD TCGA-73-4658-01A 3 5 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 35104 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF5-CFDP1 RAPGEF5 chr7 22232985 - CFDP1 chr16 75339080 - Exonic hg19 LUAD TCGA-44-5645-01A 3 8 Out-of-frame Inter-chr p15.3 q23.1 Seq+ 35105 ChimerSeq STARFusion TCGA_RNA-Seq VAC14-HYDIN VAC14 chr16 70834700 - HYDIN chr16 70913659 - Exonic hg19 LUAD TCGA-44-5645-01A 4 4 Out-of-frame Intra-chr q22.2 Seq+ 35106 ChimerSeq STARFusion TCGA_RNA-Seq BCAP29-WDR1 BCAP29 chr7 107224427 + WDR1 chr4 10117858 - Exonic hg19 LUAD TCGA-67-3772-01A 2 1 In-Frame Inter-chr p16.1 35107 ChimerSeq STARFusion TCGA_RNA-Seq CNOT2-RAB3IP CNOT2 chr12 70637260 + RAB3IP chr12 70206558 + Exonic hg19 LUAD TCGA-75-5122-01A 21 21 5'UTR-CDS Intra-chr q15 q15 Seq+ 35108 ChimerSeq STARFusion TCGA_RNA-Seq CNOT2-RAB3IP CNOT2 chr12 70637260 + RAB3IP chr12 70206744 + Exonic hg19 LUAD TCGA-75-5122-01A 21 21 5'UTR-CDS Intra-chr q15 q15 Seq+ 35109 ChimerSeq STARFusion TCGA_RNA-Seq SRD5A1-ADAMTS16 SRD5A1 chr5 6633982 + ADAMTS16 chr5 5303685 + Exonic hg19 LUAD TCGA-75-5122-01A 2 7 3'UTR-CDS Intra-chr p15.31 p15.32 Seq+ 35110 ChimerSeq STARFusion TCGA_RNA-Seq N4BP2L2-SUCLA2 N4BP2L2 chr13 33010498 - SUCLA2 chr13 48517580 - Exonic hg19 LUAD TCGA-75-5122-01A 2 2 3'UTR-CDS Intra-chr q13.1 q14.2 Seq+ 35111 ChimerSeq STARFusion TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104722244 + LHFPL3 chr7 104546634 + Exonic hg19 LUAD TCGA-55-7727-01A 4 19 Out-of-frame Intra-chr q22.2 Seq+ 35112 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-RNF139 PTK2 chr8 141696731 - RNF139 chr8 125498072 + Exonic hg19 LUAD TCGA-86-8359-01A 5 25 Out-of-frame Intra-chr q24.3 q24.13 Seq+ 35113 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-RNF139 PTK2 chr8 141710990 - RNF139 chr8 125498072 + Exonic hg19 LUAD TCGA-86-8359-01A 3 25 Out-of-frame Intra-chr q24.3 q24.13 Seq+ 35114 ChimerSeq STARFusion TCGA_RNA-Seq FASN-ZNF595 FASN chr17 80053196 - ZNF595 chr4 59323 + Exonic hg19 LUAD TCGA-86-8359-01A 3 6 In-Frame Inter-chr q25.3 p16.3 Transcription factor Seq+ 35115 ChimerSeq STARFusion TCGA_RNA-Seq FASN-ZNF718 FASN chr17 80053196 - ZNF718 chr4 59323 + Exonic hg19 LUAD TCGA-86-8359-01A 3 6 Out-of-frame Inter-chr q25.3 p16.3 Transcription factor 35116 ChimerSeq STARFusion TCGA_RNA-Seq LRRN4-MCM8 LRRN4 chr20 6031425 - MCM8 chr20 5974152 + Exonic hg19 LUAD TCGA-75-6205-01A 3 8 In-Frame Intra-chr p12.3 p12.3 Seq+ 35117 ChimerSeq STARFusion TCGA_RNA-Seq PDXK-LCA5L PDXK chr21 45168961 + LCA5L chr21 40801137 - Exonic hg19 LUAD TCGA-05-4397-01A 5 27 CDS-5'UTR Intra-chr q22.3 q22.2 Seq+ 35118 ChimerSeq STARFusion TCGA_RNA-Seq PDXK-LCA5L PDXK chr21 45168961 + LCA5L chr21 40795416 - Exonic hg19 LUAD TCGA-05-4397-01A 2 27 Out-of-frame Intra-chr q22.3 q22.2 Seq+ 35119 ChimerSeq STARFusion TCGA_RNA-Seq RASA1-RAPGEF6 RASA1 chr5 86564807 + RAPGEF6 chr5 130782396 - Exonic hg19 LUAD TCGA-05-4397-01A 4 10 In-Frame Intra-chr q14.3 q31.1 Seq+ 35120 ChimerSeq STARFusion TCGA_RNA-Seq IPO7-TMEM41B IPO7 chr11 9406394 + TMEM41B chr11 9321248 - Exonic hg19 LUAD TCGA-69-7974-01A 4 9 Out-of-frame Intra-chr p15.4 p15.4 Seq+ 35121 ChimerSeq STARFusion TCGA_RNA-Seq SDHA-CTNND2 SDHA chr5 240591 + CTNND2 chr5 11236935 - Exonic hg19 LUAD TCGA-69-7974-01A 3 9 Out-of-frame Intra-chr p15.33 Oncogene Tumor suppressor gene p15.2 Seq+ 35122 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-CRB3 TANC2 chr17 61345234 + CRB3 chr19 6465556 + Exonic hg19 LUAD TCGA-50-5946-01A 38 152 In-Frame Inter-chr q23.2 p13.3 Seq+ 35123 ChimerSeq STARFusion TCGA_RNA-Seq MPP5-GPHN MPP5 chr14 67746254 + GPHN chr14 67635650 + Exonic hg19 LUAD TCGA-50-5946-01A 11 66 In-Frame Intra-chr q23.3 q23.3 Seq+ 35124 ChimerSeq STARFusion TCGA_RNA-Seq MPP5-GPHN MPP5 chr14 67746254 + GPHN chr14 67646295 + Exonic hg19 LUAD TCGA-50-5946-01A 3 66 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 35125 ChimerSeq STARFusion TCGA_RNA-Seq RFX2-EPOR RFX2 chr19 6110404 - EPOR chr19 11489454 - Exonic hg19 LUAD TCGA-50-5946-01A 8 39 5'UTR-CDS Intra-chr p13.3 Transcription factor p13.2 Seq+ 35126 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-SLC1A3 NIPBL chr5 36877280 + SLC1A3 chr5 36671131 + Exonic hg19 LUAD TCGA-50-5946-01A 3 54 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 35127 ChimerSeq STARFusion TCGA_RNA-Seq SNX8-MAD1L1 SNX8 chr7 2353963 - MAD1L1 chr7 2188873 - Exonic hg19 LUAD TCGA-50-5946-01A 5 40 Out-of-frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 35128 ChimerSeq STARFusion TCGA_RNA-Seq UNK-ZNF266 UNK chr17 73781065 + ZNF266 chr19 9530894 - Exonic hg19 LUAD TCGA-50-5946-01A 4 37 5'UTR-5'UTR Inter-chr q25.1 p13.2 Transcription factor Seq+ 35129 ChimerSeq STARFusion TCGA_RNA-Seq DENR-KNTC1 DENR chr12 123249934 + KNTC1 chr12 123078823 + Exonic hg19 LUAD TCGA-50-5946-01A 6 21 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 35130 ChimerSeq STARFusion TCGA_RNA-Seq UNK-ZNF266 UNK chr17 73781065 + ZNF266 chr19 9544462 - Exonic hg19 LUAD TCGA-50-5946-01A 2 37 5'UTR-5'UTR Inter-chr q25.1 p13.2 Transcription factor Seq+ 35131 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD18B-SNX30 ANKRD18B chr9 33550577 + SNX30 chr9 115598494 + Exonic hg19 LUAD TCGA-50-5946-01A 4 12 In-Frame Intra-chr p13.3 q32 Seq+ 35132 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-TNPO2 RNA45S5 chrUn_gl000220 114139 + TNPO2 chr19 12811940 - Exonic hg19 LUAD TCGA-44-6147-01A 28 0 Out-of-frame Inter-chr p13.13 35133 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF4-SLC24A3 TM9SF4 chr20 30697558 + SLC24A3 chr20 19662502 + Exonic hg19 LUAD TCGA-44-6147-01A 4 1 Out-of-frame Intra-chr q11.21 p11.23 35134 ChimerSeq STARFusion TCGA_RNA-Seq C22orf32-NFAM1 C22orf32 chr22 42475958 + NFAM1 chr22 42783084 - Exonic hg19 LUAD TCGA-44-6147-01A 2 3 In-Frame Intra-chr q13.2 Seq+ 35135 ChimerSeq STARFusion TCGA_RNA-Seq TAF9-ADAMTS6 TAF9 chr5 68662330 - ADAMTS6 chr5 64625310 - Exonic hg19 LUAD TCGA-44-6147-01A 2 2 In-Frame Intra-chr q12.3 Seq+ 35136 ChimerSeq STARFusion TCGA_RNA-Seq MIPOL1-CAMKMT MIPOL1 chr14 37717112 + CAMKMT chr2 44970761 + Exonic hg19 LUAD TCGA-64-5779-01A 3 1 Out-of-frame Inter-chr q13.3 p21 35137 ChimerSeq STARFusion TCGA_RNA-Seq CAPZA2-MET CAPZA2 chr7 116528244 + MET chr7 116414935 + Exonic hg19 LUAD TCGA-78-7220-01A 5 82 In-Frame Intra-chr q31.2 q31.2 TK:Met Oncogene KB Pub Seq+ 35138 ChimerSeq STARFusion TCGA_RNA-Seq GOLGA5-RIN3 GOLGA5 chr14 93299692 + RIN3 chr14 93107583 + Exonic hg19 LUAD TCGA-78-7220-01A 3 14 Out-of-frame Intra-chr q32.12 q32.12 Seq+ 35139 ChimerSeq STARFusion TCGA_RNA-Seq SETD2-POGLUT1 SETD2 chr3 47139445 - POGLUT1 chr3 119207776 + Exonic hg19 LUAD TCGA-50-5044-01A 3 7 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene q13.33 Seq+ 35140 ChimerSeq STARFusion TCGA_RNA-Seq CRK-MYO1C CRK chr17 1326912 - MYO1C chr17 1375522 - Exonic hg19 LUAD TCGA-MP-A4T7-01A 7 24 In-Frame Intra-chr p13.3 p13.3 Seq+ 35141 ChimerSeq STARFusion TCGA_RNA-Seq CLINT1-MARCH11 CLINT1 chr5 157285938 - 2019_ 3_ 11_ chr5 16067902 - Exonic hg19 LUAD TCGA-93-7348-01A 18 137 Out-of-frame Intra-chr q33.3 p15.1 Seq+ 35142 ChimerSeq STARFusion TCGA_RNA-Seq CLINT1-MARCH11 CLINT1 chr5 157285938 - 2019_ 3_ 11_ chr5 16091190 - Exonic hg19 LUAD TCGA-93-7348-01A 3 137 Out-of-frame Intra-chr q33.3 p15.1 Seq+ 35143 ChimerSeq STARFusion TCGA_RNA-Seq CACNB1-IGSF8 CACNB1 chr17 37339966 - IGSF8 chr1 160065036 - Exonic hg19 LUAD TCGA-93-7348-01A 2 3 Out-of-frame Inter-chr q12 q23.2 Seq+ 35144 ChimerSeq STARFusion TCGA_RNA-Seq SLC43A1-COG7 SLC43A1 chr11 57281431 - COG7 chr16 23404668 - Exonic hg19 LUAD TCGA-93-7348-01A 2 1 Out-of-frame Inter-chr q12.1 p12.2 Seq+ 35145 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0753-PITPNM3 KIAA0753 chr17 6502557 - PITPNM3 chr17 6387612 - Exonic hg19 LUAD TCGA-62-8402-01A 3 6 Out-of-frame Intra-chr p13.1 p13.1 35146 ChimerSeq STARFusion TCGA_RNA-Seq RFTN1-DAZL RFTN1 chr3 16450882 - DAZL chr3 16640105 - Exonic hg19 LUAD TCGA-55-6972-01A 3 23 In-Frame Intra-chr p24.3 p24.3 Seq+ 35147 ChimerSeq STARFusion TCGA_RNA-Seq MAST2-NDC1 MAST2 chr1 46269744 + NDC1 chr1 54238162 - Exonic hg19 LUAD TCGA-L9-A5IP 15 2 Out-of-frame Intra-chr p34.1 AGC:MAST p32.3 Seq+ 35148 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-POTEE IGH@ chr14 106586272 - POTEE chr2 131976271 + Exonic hg19 LUAD TCGA-L9-A5IP 9 1 Out-of-frame Inter-chr 32.33 q21.1 35149 ChimerSeq STARFusion TCGA_RNA-Seq HERC2-COL5A2 HERC2 chr15 28538034 - COL5A2 chr2 189940163 - Exonic hg19 LUAD TCGA-L9-A5IP 7 6 Out-of-frame Inter-chr q32.2 35150 ChimerSeq STARFusion TCGA_RNA-Seq BACH1-MAP3K7CL BACH1 chr21 30671274 + MAP3K7CL chr21 30503116 + Exonic hg19 LUAD TCGA-L9-A5IP 2 20 Out-of-frame Intra-chr q21.3 Transcription factor q21.3 35151 ChimerSeq STARFusion TCGA_RNA-Seq BACH1-MAP3K7CL BACH1 chr21 30671274 + MAP3K7CL chr21 30521510 + Exonic hg19 LUAD TCGA-L9-A5IP 2 20 Out-of-frame Intra-chr q21.3 Transcription factor q21.3 35152 ChimerSeq STARFusion TCGA_RNA-Seq BACH1-MAP3K7CL BACH1 chr21 30671274 + MAP3K7CL chr21 30505627 + Exonic hg19 LUAD TCGA-L9-A5IP 2 20 Out-of-frame Intra-chr q21.3 Transcription factor q21.3 35153 ChimerSeq STARFusion TCGA_RNA-Seq PDE4D-RFWD2 PDE4D chr5 59064073 - RFWD2 chr1 175916375 - Exonic hg19 LUAD TCGA-L9-A5IP 3 10 Out-of-frame Inter-chr q12.1 q25.2 Tumor suppressor gene Seq+ 35154 ChimerSeq STARFusion TCGA_RNA-Seq RPRD1B-CTNNBL1 RPRD1B chr20 36694658 + CTNNBL1 chr20 36393599 + Exonic hg19 LUAD TCGA-44-5644-01A 7 47 In-Frame Intra-chr q11.23 q11.23 Seq+ 35155 ChimerSeq STARFusion TCGA_RNA-Seq TTC28-ODF1 TTC28 chr22 29025540 - ODF1 chr8 103572680 + Exonic hg19 LUAD TCGA-44-5644-01A 11 21 Out-of-frame Inter-chr q12.1 q22.3 Seq+ 35156 ChimerSeq STARFusion TCGA_RNA-Seq NF1-PSMD11 NF1 chr17 29497015 + PSMD11 chr17 30773963 + Exonic hg19 LUAD TCGA-44-5644-01A 12 14 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 35157 ChimerSeq STARFusion TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104707254 + LHFPL3 chr7 104546634 + Exonic hg19 LUAD TCGA-44-5644-01A 6 22 Out-of-frame Intra-chr q22.2 Seq+ 35158 ChimerSeq STARFusion TCGA_RNA-Seq TSEN15-ACBD6 TSEN15 chr1 184021024 + ACBD6 chr1 180461500 - Exonic hg19 LUAD TCGA-44-5644-01A 3 24 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 35159 ChimerSeq STARFusion TCGA_RNA-Seq SNHG7-MCM6 SNHG7 chr9 139619507 - MCM6 chr2 136630413 - Exonic hg19 LUAD TCGA-44-5644-01A 4 16 3'UTR-CDS Inter-chr q34.3 q21.3 Seq+ 35160 ChimerSeq STARFusion TCGA_RNA-Seq ERC1-ZNF492 ERC1 chr12 1399178 + ZNF492 chr19 22846602 + Exonic hg19 LUAD TCGA-44-5644-01A 2 7 Out-of-frame Inter-chr p12 Transcription factor Seq+ 35161 ChimerSeq STARFusion TCGA_RNA-Seq ABP1-GIMAP1 ABP1 chr7 150549646 + GIMAP1 chr7 150416130 + Exonic hg19 LUAD TCGA-44-5644-01A 2 1 5'UTR-5'UTR Intra-chr q36.1 35162 ChimerSeq STARFusion TCGA_RNA-Seq ITGB8-MACC1 ITGB8 chr7 20445794 + MACC1 chr7 20204022 - Exonic hg19 LUAD TCGA-44-5644-01A 2 1 CDS-5'UTR Intra-chr p21.1 p21.1 35163 ChimerSeq STARFusion TCGA_RNA-Seq C6orf106-NUDT3 C6orf106 chr6 34614378 - NUDT3 chr6 34309749 - Exonic hg19 LUAD TCGA-55-7913-01B 5 84 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 35164 ChimerSeq STARFusion TCGA_RNA-Seq SPDEF-VSTM2B SPDEF chr6 34523706 - VSTM2B chr19 30054753 + Exonic hg19 LUAD TCGA-55-7913-01B 8 9 5'UTR-CDS Inter-chr p21.31 Transcription factor q12 Seq+ 35165 ChimerSeq STARFusion TCGA_RNA-Seq STAG2-GRIA3 STAG2 chrX 123164975 + GRIA3 chrX 122459877 + Exonic hg19 LUAD TCGA-55-7913-01B 3 9 Out-of-frame Intra-chr q25 Oncogene q25 Seq+ 35166 ChimerSeq STARFusion TCGA_RNA-Seq SLC12A2-CSNK1A1 SLC12A2 chr5 127420402 + CSNK1A1 chr5 148899951 - Exonic hg19 LUAD TCGA-55-7913-01B 2 5 In-Frame Intra-chr q23.3 q32 Tumor suppressor gene Seq+ 35167 ChimerSeq STARFusion TCGA_RNA-Seq RCAN1-GRIK1 RCAN1 chr21 35987059 - GRIK1 chr21 31066382 - Exonic hg19 LUAD TCGA-55-7913-01B 3 0 Out-of-frame Intra-chr q22.12 q21.3 35168 ChimerSeq STARFusion TCGA_RNA-Seq PVRL2-SCN1B PVRL2 chr19 45377735 + SCN1B chr19 35523432 + Exonic hg19 LUAD TCGA-55-7913-01B 2 3 In-Frame Intra-chr q13.11 35169 ChimerSeq STARFusion TCGA_RNA-Seq PASK-BOK PASK chr2 242079936 - BOK chr2 242509540 + Exonic hg19 LUAD TCGA-55-6985-01A 2 7 Out-of-frame Intra-chr q37.3 CAMK:CAMKL q37.3 Seq+ 35170 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-LOC100506844 CTDSP2 chr12 58240155 - LOC100506844 chr12 58329336 - Exonic hg19 LUAD TCGA-50-5066-01A 17 31 CDS-3'UTR Intra-chr q14.1 35171 ChimerSeq STARFusion TCGA_RNA-Seq CWC25-B4GALNT2 CWC25 chr17 36977154 - B4GALNT2 chr17 47218609 + Exonic hg19 LUAD TCGA-50-5066-01A 4 9 In-Frame Intra-chr q12 q21.32 Seq+ 35172 ChimerSeq STARFusion TCGA_RNA-Seq MRPS35-CCDC91 MRPS35 chr12 27890541 + CCDC91 chr12 28636985 + Exonic hg19 LUAD TCGA-50-5066-01A 4 8 In-Frame Intra-chr p11.22 p11.22 35173 ChimerSeq STARFusion TCGA_RNA-Seq ZNF3-RUNDC3B ZNF3 chr7 99672758 - RUNDC3B chr7 87323224 + Exonic hg19 LUAD TCGA-50-5066-01A 4 7 In-Frame Intra-chr q22.1 Transcription factor q21.12 Seq+ 35174 ChimerSeq STARFusion TCGA_RNA-Seq TMED5-ADORA3 TMED5 chr1 93645611 - ADORA3 chr1 112028462 - Exonic hg19 LUAD TCGA-50-5066-01A 2 4 Out-of-frame Intra-chr p22.1 p13.2 Seq+ 35175 ChimerSeq STARFusion TCGA_RNA-Seq LRTOMT-LAMTOR1 LRTOMT chr11 71804747 + LAMTOR1 chr11 71810302 - Exonic hg19 LUAD TCGA-50-5066-01A 2 1 In-Frame Intra-chr q13.4 q13.4 35176 ChimerSeq STARFusion TCGA_RNA-Seq NLK-NF1 NLK chr17 26370357 + NF1 chr17 29687505 + Exonic hg19 LUAD TCGA-69-7764-01A 8 22 Out-of-frame Intra-chr q11.2 CMGC:MAPK q11.2 Oncogene Tumor suppressor gene Seq+ 35177 ChimerSeq STARFusion TCGA_RNA-Seq SUPT5H-NADSYN1 SUPT5H chr19 39950600 + NADSYN1 chr11 71174478 + Exonic hg19 LUAD TCGA-69-7764-01A 5 18 Out-of-frame Inter-chr q13.2 q13.4 Seq+ 35178 ChimerSeq STARFusion TCGA_RNA-Seq ATP11A-C13orf35 ATP11A chr13 113439571 + C13orf35 chr13 113337588 + Exonic hg19 LUAD TCGA-44-2655-01A 4 4 Out-of-frame Intra-chr q34 Seq+ 35179 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 58013902 + VMP1 chr17 57915656 + Exonic hg19 LUAD TCGA-49-AAQV 17 56 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 35180 ChimerSeq STARFusion TCGA_RNA-Seq USF2-CLASRP USF2 chr19 35762044 + CLASRP chr19 45556356 + Exonic hg19 LUAD TCGA-49-AAQV 15 48 Out-of-frame Intra-chr q13.12 Transcription factor q13.32 Seq+ 35181 ChimerSeq STARFusion TCGA_RNA-Seq USF2-CLASRP USF2 chr19 35762044 + CLASRP chr19 45559708 + Exonic hg19 LUAD TCGA-49-AAQV 2 48 In-Frame Intra-chr q13.12 Transcription factor q13.32 Seq+ 35182 ChimerSeq STARFusion TCGA_RNA-Seq NAP1L1-SLCO1B1 NAP1L1 chr12 76461151 - SLCO1B1 chr12 21284057 + Exonic hg19 LUAD TCGA-49-AAQV 5 25 CDS-5'UTR Intra-chr q21.2 p12.1 Seq+ 35183 ChimerSeq STARFusion TCGA_RNA-Seq NAP1L1-SLCO1B1 NAP1L1 chr12 76478347 - SLCO1B1 chr12 21294448 + Exonic hg19 LUAD TCGA-49-AAQV 2 25 5'UTR-5'UTR Intra-chr q21.2 p12.1 Seq+ 35184 ChimerSeq STARFusion TCGA_RNA-Seq RBM4-DPP3 RBM4 chr11 66407594 + DPP3 chr11 66276550 + Exonic hg19 LUAD TCGA-49-AAQV 2 8 In-Frame Intra-chr q13.2 Tumor suppressor gene q13.2 35185 ChimerSeq STARFusion TCGA_RNA-Seq SREBF2-PPAPDC1A SREBF2 chr22 42229362 + PPAPDC1A chr10 122334643 + Exonic hg19 LUAD TCGA-97-8175-01A 46 183 In-Frame Inter-chr q13.2 Transcription factor Seq+ 35186 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-TRAPPC9 PTK2 chr8 142011224 - TRAPPC9 chr8 140744445 - Exonic hg19 LUAD TCGA-55-8511-01A 81 373 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 35187 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT3-BCAS3 B4GALT3 chr1 161147213 - BCAS3 chr17 59161828 + Exonic hg19 LUAD TCGA-55-8511-01A 13 92 5'UTR-CDS Inter-chr q23.3 q23.2 Seq+ 35188 ChimerSeq STARFusion TCGA_RNA-Seq DROSHA-SPEF2 DROSHA chr5 31483661 - SPEF2 chr5 35628562 + Exonic hg19 LUAD TCGA-05-5715-01A 3 1 In-Frame Intra-chr p13.3 p13.2 Seq+ 35189 ChimerSeq STARFusion TCGA_RNA-Seq BAD-STX5 BAD chr11 64039085 - STX5 chr11 62575100 - Exonic hg19 LUAD TCGA-53-7813-01A 2 2 Out-of-frame Intra-chr q13.1 q12.3 Seq+ 35190 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-ELK2AP GAS6 chr13 114525073 - ELK2AP chr14 106136185 - Exonic hg19 LUAD TCGA-78-7162-01A 3 0 Out-of-frame Inter-chr q34 Oncogene 35191 ChimerSeq STARFusion TCGA_RNA-Seq SNED1-PPP1R7 SNED1 chr2 241938467 + PPP1R7 chr2 242102700 + Exonic hg19 LUAD TCGA-MN-A4N5-01A 39 58 In-Frame Intra-chr q37.3 q37.3 Seq+ 35192 ChimerSeq STARFusion TCGA_RNA-Seq PHKB-PDE3A PHKB chr16 47703328 + PDE3A chr12 20799424 + Exonic hg19 LUAD TCGA-MN-A4N5-01A 3 11 Out-of-frame Inter-chr q12.1 p12.2 Seq+ 35193 ChimerSeq STARFusion TCGA_RNA-Seq SLC38A9-KCNIP1 SLC38A9 chr5 54945035 - KCNIP1 chr5 170159804 + Exonic hg19 LUAD TCGA-MN-A4N5-01A 2 10 Out-of-frame Intra-chr q11.2 q35.1 Seq+ 35194 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0556-LOC283867 KIAA0556 chr16 27561498 + LOC283867 chr16 65319342 - Exonic hg19 LUAD TCGA-MN-A4N5-01A 4 0 CDS-3'UTR Intra-chr p12.1 35195 ChimerSeq STARFusion TCGA_RNA-Seq CCT6P3-C21orf37 CCT6P3 chr7 64498943 + C21orf37 chr21 18821183 + Exonic hg19 LUAD TCGA-MN-A4N5-01A 2 2 5'UTR-5'UTR Inter-chr q11.21 35196 ChimerSeq STARFusion TCGA_RNA-Seq NR1D2-UBE2E2 NR1D2 chr3 24004096 + UBE2E2 chr3 23574045 + Exonic hg19 LUAD TCGA-55-A57B 4 7 In-Frame Intra-chr p24.2 Transcription factor p24.3 Seq+ 35197 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-RTN4IP1 CTDSP2 chr12 58223231 - RTN4IP1 chr6 107035737 - Exonic hg19 LUAD TCGA-44-2657-01A 20 78 Out-of-frame Inter-chr q14.1 q21 Tumor suppressor gene 35198 ChimerSeq STARFusion TCGA_RNA-Seq ZNF302-CACNA1A ZNF302 chr19 35169718 + CACNA1A chr19 13366073 - Exonic hg19 LUAD TCGA-44-2657-01A 4 16 In-Frame Intra-chr q13.11 Transcription factor p13.13 Seq+ 35199 ChimerSeq STARFusion TCGA_RNA-Seq FGFR2-ATE1 FGFR2 chr10 123353223 - ATE1 chr10 123600778 - Exonic hg19 LUAD TCGA-44-2657-01A 2 7 Out-of-frame Intra-chr q26.13 TK:FGFR Oncogene q26.13 Seq+ 35200 ChimerSeq STARFusion TCGA_RNA-Seq SLC16A7-OS9 SLC16A7 chr12 59990017 + OS9 chr12 58109543 + Exonic hg19 LUAD TCGA-44-2657-01A 2 5 5'UTR-CDS Intra-chr q14.1 q13.3 Seq+ 35201 ChimerSeq STARFusion TCGA_RNA-Seq SMARCA4-DOCK6 SMARCA4 chr19 11130377 + DOCK6 chr19 11311728 - Exonic hg19 LUAD TCGA-55-8505-01A 27 108 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 35202 ChimerSeq STARFusion TCGA_RNA-Seq RDH13-PPP6R1 RDH13 chr19 55568021 - PPP6R1 chr19 55758477 - Exonic hg19 LUAD TCGA-55-8505-01A 3 45 CDS-5'UTR Intra-chr q13.42 Seq+ 35203 ChimerSeq STARFusion TCGA_RNA-Seq ROCK1-CABYR ROCK1 chr18 18690779 - CABYR chr18 21735665 + Exonic hg19 LUAD TCGA-97-7552-01A 13 27 Out-of-frame Intra-chr q11.1 AGC:DMPK q11.2 Seq+ 35204 ChimerSeq STARFusion TCGA_RNA-Seq FAF1-DCAF6 FAF1 chr1 51001041 - DCAF6 chr1 168034828 + Exonic hg19 LUAD TCGA-69-7763-01A 4 7 In-Frame Intra-chr p32.3 q24.2 Seq+ 35205 ChimerSeq STARFusion TCGA_RNA-Seq POGZ-C1orf21 POGZ chr1 151400299 - C1orf21 chr1 184446520 + Exonic hg19 LUAD TCGA-69-7763-01A 4 3 CDS-5'UTR Intra-chr q21.3 q25.3 Seq+ 35206 ChimerSeq STARFusion TCGA_RNA-Seq ZNF431-SKAP2 ZNF431 chr19 21350469 + SKAP2 chr7 26883756 - Exonic hg19 LUAD TCGA-69-7763-01A 2 2 In-Frame Inter-chr p12 Transcription factor p15.2 35207 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992064 + VMP1 chr17 57842332 + Exonic hg19 LUAD TCGA-93-A4JQ-01A 27 135 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 35208 ChimerSeq STARFusion TCGA_RNA-Seq PLAA-PTPLAD2 PLAA chr9 26946895 - PTPLAD2 chr9 21029397 - Exonic hg19 LUAD TCGA-93-A4JQ-01A 10 87 In-Frame Intra-chr p21.2 Tumor suppressor gene Seq+ 35209 ChimerSeq STARFusion TCGA_RNA-Seq PLAA-PTPLAD2 PLAA chr9 26946895 - PTPLAD2 chr9 21016009 - Exonic hg19 LUAD TCGA-93-A4JQ-01A 3 87 Out-of-frame Intra-chr p21.2 Tumor suppressor gene Seq+ 35210 ChimerSeq STARFusion TCGA_RNA-Seq MED13L-COL23A1 MED13L chr12 116714865 - COL23A1 chr5 177690325 - Exonic hg19 LUAD TCGA-93-A4JQ-01A 9 55 In-Frame Inter-chr q24.21 q35.3 Seq+ 35211 ChimerSeq STARFusion TCGA_RNA-Seq ATAD2-LRP12 ATAD2 chr8 124408427 - LRP12 chr8 105521302 - Exonic hg19 LUAD TCGA-93-A4JQ-01A 8 12 Out-of-frame Intra-chr q24.13 q22.3 Seq+ 35212 ChimerSeq STARFusion TCGA_RNA-Seq LYST-ARID4B LYST chr1 235918778 - ARID4B chr1 235331967 - Exonic hg19 LUAD TCGA-93-A4JQ-01A 3 12 Out-of-frame Intra-chr q42.3 q42.3 35213 ChimerSeq STARFusion TCGA_RNA-Seq TEC-NCAM2 TEC chr4 48271769 - NCAM2 chr21 22746183 + Exonic hg19 LUAD TCGA-93-A4JQ-01A 2 7 5'UTR-CDS Inter-chr p11 TK:Tec Tumor suppressor gene q21.1 Tumor suppressor gene Seq+ 35214 ChimerSeq STARFusion TCGA_RNA-Seq TYW1-TMEM248 TYW1 chr7 66463941 + TMEM248 chr7 66420489 + Exonic hg19 LUAD TCGA-64-5781-01A 8 21 Out-of-frame Intra-chr q11.21 q11.21 35215 ChimerSeq STARFusion TCGA_RNA-Seq LAPTM4B-MTDH LAPTM4B chr8 98817692 + MTDH chr8 98731277 + Exonic hg19 LUAD TCGA-64-5781-01A 4 3 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 35216 ChimerSeq STARFusion TCGA_RNA-Seq CALM3-EMP3 CALM3 chr19 47104694 + EMP3 chr19 48830087 + Exonic hg19 LUAD TCGA-64-5781-01A 2 2 CDS-5'UTR Intra-chr q13.32 q13.33 35217 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 LUAD TCGA-64-5781-01A 2 2 3'UTR-5'UTR Intra-chr q34 35218 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-DDR2 KDM2A chr11 67007840 + DDR2 chr1 162749902 + Exonic hg19 LUAD TCGA-86-8054-01A 10 19 In-Frame Inter-chr q13.2 Transcription factor q23.3 TK:DDR Oncogene Tumor suppressor gene Seq+ 35219 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK5-ALDH2 MAPKAPK5 chr12 112280573 + ALDH2 chr12 112237710 + Exonic hg19 LUAD TCGA-86-8054-01A 4 7 In-Frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 Seq+ 35220 ChimerSeq STARFusion TCGA_RNA-Seq PCDH7-FLJ13197 PCDH7 chr4 30726218 + FLJ13197 chr4 38629723 - Exonic hg19 LUAD TCGA-86-8054-01A 2 14 CDS-3'UTR Intra-chr p15.1 35221 ChimerSeq STARFusion TCGA_RNA-Seq AFF1-PTPN13 AFF1 chr4 87869723 + PTPN13 chr4 87556405 + Exonic hg19 LUAD TCGA-05-4249-01A 3 7 CDS-5'UTR Intra-chr q21.3 Oncogene q21.3 Tumor suppressor gene Seq+ 35222 ChimerSeq STARFusion TCGA_RNA-Seq TACC2-HS1BP3 TACC2 chr10 123892249 + HS1BP3 chr2 20838412 - Exonic hg19 LUAD TCGA-05-4420-01A 13 121 Out-of-frame Inter-chr q26.13 p24.1 Seq+ 35223 ChimerSeq STARFusion TCGA_RNA-Seq TACC2-HS1BP3 TACC2 chr10 123892249 + HS1BP3 chr2 20840940 - Exonic hg19 LUAD TCGA-05-4420-01A 11 121 Out-of-frame Inter-chr q26.13 p24.1 Seq+ 35224 ChimerSeq STARFusion TCGA_RNA-Seq TACC2-HS1BP3 TACC2 chr10 123903221 + HS1BP3 chr2 20840940 - Exonic hg19 LUAD TCGA-05-4420-01A 4 121 Out-of-frame Inter-chr q26.13 p24.1 Seq+ 35225 ChimerSeq STARFusion TCGA_RNA-Seq TACC2-HS1BP3 TACC2 chr10 123903221 + HS1BP3 chr2 20838412 - Exonic hg19 LUAD TCGA-05-4420-01A 2 121 Out-of-frame Inter-chr q26.13 p24.1 Seq+ 35226 ChimerSeq STARFusion TCGA_RNA-Seq MUT-SUPT3H MUT chr6 49430881 - SUPT3H chr6 44988369 - Exonic hg19 LUAD TCGA-05-4420-01A 16 57 5'UTR-CDS Intra-chr p12.3 p21.1 Seq+ 35227 ChimerSeq STARFusion TCGA_RNA-Seq MUT-SUPT3H MUT chr6 49430816 - SUPT3H chr6 44988369 - Exonic hg19 LUAD TCGA-05-4420-01A 12 57 5'UTR-CDS Intra-chr p12.3 p21.1 Seq+ 35228 ChimerSeq STARFusion TCGA_RNA-Seq TAF3-DNAJC1 TAF3 chr10 7860838 + DNAJC1 chr10 22095028 - Exonic hg19 LUAD TCGA-05-4420-01A 6 28 Out-of-frame Intra-chr p14 p12.31 Seq+ 35229 ChimerSeq STARFusion TCGA_RNA-Seq TAF3-DNAJC1 TAF3 chr10 7860838 + DNAJC1 chr10 22055238 - Exonic hg19 LUAD TCGA-05-4420-01A 3 28 Out-of-frame Intra-chr p14 p12.31 Seq+ 35230 ChimerSeq STARFusion TCGA_RNA-Seq HAT1-EXOC6B HAT1 chr2 172844276 + EXOC6B chr2 72411316 - Exonic hg19 LUAD TCGA-05-4420-01A 6 15 In-Frame Intra-chr q31.1 p13.2 Seq+ 35231 ChimerSeq STARFusion TCGA_RNA-Seq GCC2-ANXA4 GCC2 chr2 109068922 + ANXA4 chr2 70008652 + Exonic hg19 LUAD TCGA-05-4420-01A 6 1 5'UTR-5'UTR Intra-chr q12.3 p13.3 35232 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R1B-ALG9 PPP2R1B chr11 111612777 - ALG9 chr11 111680497 - Exonic hg19 LUAD TCGA-05-4420-01A 3 7 Out-of-frame Intra-chr q23.1 Tumor suppressor gene q23.1 Seq+ 35233 ChimerSeq STARFusion TCGA_RNA-Seq TMEM104-RAB37 TMEM104 chr17 72773514 + RAB37 chr17 72736907 + Exonic hg19 LUAD TCGA-05-4420-01A 3 7 In-Frame Intra-chr q25.1 q25.1 Seq+ 35234 ChimerSeq STARFusion TCGA_RNA-Seq PTK7-DLK2 PTK7 chr6 43044305 + DLK2 chr6 43422212 - Exonic hg19 LUAD TCGA-05-4420-01A 2 10 In-Frame Intra-chr p21.1 p21.1 Seq+ 35235 ChimerSeq STARFusion TCGA_RNA-Seq CCSER1-MMRN1 CCSER1 chr4 91048982 + MMRN1 chr4 90848946 + Exonic hg19 LUAD TCGA-05-4420-01A 2 5 Out-of-frame Intra-chr q22.1 q22.1 35236 ChimerSeq STARFusion TCGA_RNA-Seq RHEB-PRKAG2 RHEB chr7 151216546 - PRKAG2 chr7 151257703 - Exonic hg19 LUAD TCGA-05-4420-01A 2 1 Out-of-frame Intra-chr q36.1 Oncogene q36.1 Seq+ 35237 ChimerSeq STARFusion TCGA_RNA-Seq C17orf62-NARF C17orf62 chr17 80408576 - NARF chr17 80443373 + Exonic hg19 LUAD TCGA-05-4420-01A 2 0 5'UTR-CDS Intra-chr q25.3 q25.3 Seq+ 35238 ChimerSeq STARFusion TCGA_RNA-Seq PDLIM1-SORBS1 PDLIM1 chr10 97031390 - SORBS1 chr10 97081778 - Exonic hg19 LUAD TCGA-69-7978-01A 11 49 Out-of-frame Intra-chr q23.33 q24.1 Seq+ 35239 ChimerSeq STARFusion TCGA_RNA-Seq TUBD1-RPS6KB1 TUBD1 chr17 57970058 - RPS6KB1 chr17 57987923 + Exonic hg19 LUAD TCGA-69-7978-01A 19 6 5'UTR-CDS Intra-chr q23.1 q23.1 Oncogene Seq+ 35240 ChimerSeq STARFusion TCGA_RNA-Seq PDLIM1-SORBS1 PDLIM1 chr10 97050577 - SORBS1 chr10 97081778 - Exonic hg19 LUAD TCGA-69-7978-01A 7 49 In-Frame Intra-chr q23.33 q24.1 Seq+ 35241 ChimerSeq STARFusion TCGA_RNA-Seq BMP2K-LOC100505875 BMP2K chr4 79763681 + LOC100505875 chr4 80116990 + Exonic hg19 LUAD TCGA-69-7978-01A 5 30 CDS-5'UTR Intra-chr q21.21 35242 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992064 + VMP1 chr17 57886157 + Exonic hg19 LUAD TCGA-69-7978-01A 7 20 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 35243 ChimerSeq STARFusion TCGA_RNA-Seq FLJ22447-PRKCH FLJ22447 chr14 62037478 + PRKCH chr14 61952220 + Exonic hg19 LUAD TCGA-69-7978-01A 6 21 5'UTR-CDS Intra-chr q23.1 q23.1 35244 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57990165 + VMP1 chr17 57886157 + Exonic hg19 LUAD TCGA-69-7978-01A 2 20 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 35245 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57814814 + Exonic hg19 LUAD TCGA-69-7978-01A 2 20 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 35246 ChimerSeq STARFusion TCGA_RNA-Seq ATOH8-GNLY ATOH8 chr2 85991305 + GNLY chr2 85922443 + Exonic hg19 LUAD TCGA-69-7978-01A 4 8 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 35247 ChimerSeq STARFusion TCGA_RNA-Seq SIRT1-CELF2 SIRT1 chr10 69651312 + CELF2 chr10 11299701 + Exonic hg19 LUAD TCGA-69-7978-01A 2 6 Out-of-frame Intra-chr q21.3 Tumor suppressor gene p14 Seq+ 35248 ChimerSeq STARFusion TCGA_RNA-Seq RABL2A-DENND6B RABL2A chr2 114386290 + DENND6B chr22 50757432 - Exonic hg19 LUAD TCGA-69-7978-01A 3 1 Out-of-frame Inter-chr q14.1 q13.33 35249 ChimerSeq STARFusion TCGA_RNA-Seq HLCS-LINC00649 HLCS chr21 38269160 - LINC00649 chr21 35341538 + Exonic hg19 LUAD TCGA-69-7978-01A 2 4 Out-of-frame Intra-chr q22.13 q22.11 35250 ChimerSeq STARFusion TCGA_RNA-Seq SSR2-UBQLN4 SSR2 chr1 155984752 - UBQLN4 chr1 156006921 - Exonic hg19 LUAD TCGA-69-7978-01A 2 2 In-Frame Intra-chr q22 q22 35251 ChimerSeq STARFusion TCGA_RNA-Seq TAF3-ATP5C1 TAF3 chr10 7866523 + ATP5C1 chr10 7839010 + Exonic hg19 LUAD TCGA-53-7624-01A 8 52 In-Frame Intra-chr p14 p14 Seq+ 35252 ChimerSeq STARFusion TCGA_RNA-Seq EEF1D-TSTA3 EEF1D chr8 144679049 - TSTA3 chr8 144697085 - Exonic hg19 LUAD TCGA-53-7624-01A 7 20 5'UTR-CDS Intra-chr Seq+ 35253 ChimerSeq STARFusion TCGA_RNA-Seq NCOA2-LEPROTL1 NCOA2 chr8 71315935 - LEPROTL1 chr8 29959414 + Exonic hg19 LUAD TCGA-53-7624-01A 3 20 5'UTR-CDS Intra-chr q13.3 Oncogene Transcription factor p12 Seq+ 35254 ChimerSeq STARFusion TCGA_RNA-Seq RPS19-DMRTC2 RPS19 chr19 42373823 + DMRTC2 chr19 42352863 + Exonic hg19 LUAD TCGA-53-7624-01A 2 18 In-Frame Intra-chr q13.2 q13.2 Transcription factor Seq+ 35255 ChimerSeq STARFusion TCGA_RNA-Seq TYMP-SYCE3 TYMP chr22 50966941 - SYCE3 chr22 50989831 - Exonic hg19 LUAD TCGA-53-7624-01A 2 6 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 35256 ChimerSeq STARFusion TCGA_RNA-Seq STK39-SCN3A STK39 chr2 168986051 - SCN3A chr2 166012413 - Exonic hg19 LUAD TCGA-55-6968-01A 2 3 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 35257 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57760623 + VMP1 chr17 57886157 + Exonic hg19 LUAD TCGA-78-7542-01A 72 194 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 35258 ChimerSeq STARFusion TCGA_RNA-Seq MET-CNTNAP5 MET chr7 116340338 + CNTNAP5 chr2 124999777 + Exonic hg19 LUAD TCGA-78-7542-01A 4 64 Out-of-frame Inter-chr q31.2 TK:Met Oncogene q14.3 Seq+ 35259 ChimerSeq STARFusion TCGA_RNA-Seq PRPF4B-CDYL PRPF4B chr6 4021700 + CDYL chr6 4935749 + Exonic hg19 LUAD TCGA-78-7542-01A 8 22 Out-of-frame Intra-chr p25.2 p25.1 Seq+ 35260 ChimerSeq STARFusion TCGA_RNA-Seq ROCK1-GATA6 ROCK1 chr18 18690779 - GATA6 chr18 19780619 + Exonic hg19 LUAD TCGA-44-A47G-01A 3 8 In-Frame Intra-chr q11.1 AGC:DMPK q11.2 Transcription factor Seq+ 35261 ChimerSeq STARFusion TCGA_RNA-Seq YY1-CCNK YY1 chr14 100706260 + CCNK chr14 99968544 + Exonic hg19 LUAD TCGA-44-A47G-01A 3 8 Out-of-frame Intra-chr q32.2 Transcription factor q32.2 Seq+ 35262 ChimerSeq STARFusion TCGA_RNA-Seq USB1-CCDC135 USB1 chr16 58036549 + CCDC135 chr16 57761211 + Exonic hg19 LUAD TCGA-L4-A4E5-01A 27 102 Out-of-frame Intra-chr q21 35263 ChimerSeq STARFusion TCGA_RNA-Seq HSD17B3-CDC14B HSD17B3 chr9 99060698 - CDC14B chr9 99327765 - Exonic hg19 LUAD TCGA-L4-A4E5-01A 2 1 Out-of-frame Intra-chr q22.32 q22.33 35264 ChimerSeq STARFusion TCGA_RNA-Seq UBXN4-R3HDM1 UBXN4 chr2 136505939 + R3HDM1 chr2 136467003 + Exonic hg19 LUAD TCGA-55-7576-01A 12 73 In-Frame Intra-chr q21.3 q21.3 Seq+ 35265 ChimerSeq STARFusion TCGA_RNA-Seq NAV2-CNTN5 NAV2 chr11 19890543 + CNTN5 chr11 100126492 + Exonic hg19 LUAD TCGA-55-7576-01A 6 48 In-Frame Intra-chr p15.1 q22.1 Seq+ 35266 ChimerSeq STARFusion TCGA_RNA-Seq DCAF6-TIPRL DCAF6 chr1 167906246 + TIPRL chr1 168165785 + Exonic hg19 LUAD TCGA-55-7576-01A 6 41 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 35267 ChimerSeq STARFusion TCGA_RNA-Seq ABR-YWHAE ABR chr17 953290 - YWHAE chr17 1257641 - Exonic hg19 LUAD TCGA-55-7576-01A 6 31 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 35268 ChimerSeq STARFusion TCGA_RNA-Seq FOXJ3-CLIC6 FOXJ3 chr1 42730786 - CLIC6 chr21 36079578 + Exonic hg19 LUAD TCGA-55-7576-01A 7 20 In-Frame Inter-chr p34.2 Transcription factor q22.12 Seq+ 35269 ChimerSeq STARFusion TCGA_RNA-Seq DCAF6-ILDR2 DCAF6 chr1 167906246 + ILDR2 chr1 166908807 - Exonic hg19 LUAD TCGA-55-7576-01A 4 25 In-Frame Intra-chr q24.2 q24.1 Seq+ 35270 ChimerSeq STARFusion TCGA_RNA-Seq SLC16A5-OTOP2 SLC16A5 chr17 73085399 + OTOP2 chr17 72923318 + Exonic hg19 LUAD TCGA-55-7576-01A 2 22 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 35271 ChimerSeq STARFusion TCGA_RNA-Seq UBAP1-KIF24 UBAP1 chr9 34242106 + KIF24 chr9 34271928 - Exonic hg19 LUAD TCGA-55-7576-01A 4 3 In-Frame Intra-chr p13.3 p13.3 35272 ChimerSeq STARFusion TCGA_RNA-Seq LOC441461-STX17 LOC441461 chr9 102657162 - STX17 chr9 102691060 + Exonic hg19 LUAD TCGA-55-7576-01A 2 6 3'UTR-CDS Intra-chr q31.1 35273 ChimerSeq STARFusion TCGA_RNA-Seq HM13-DEFB123 HM13 chr20 30126064 + DEFB123 chr20 30037832 + Exonic hg19 LUAD TCGA-55-7576-01A 2 5 Out-of-frame Intra-chr q11.21 q11.21 35274 ChimerSeq STARFusion TCGA_RNA-Seq CCDC28A-LOC100132735 CCDC28A chr6 139109576 + LOC100132735 chr6 140177901 + Exonic hg19 LUAD TCGA-50-5049-01A 17 85 CDS-5'UTR Intra-chr q24.1 35275 ChimerSeq STARFusion TCGA_RNA-Seq CPM-LOC100132735 CPM chr12 69326458 - LOC100132735 chr6 140177901 + Exonic hg19 LUAD TCGA-50-5049-01A 10 36 CDS-5'UTR Inter-chr q15 35276 ChimerSeq STARFusion TCGA_RNA-Seq CPM-LYZ CPM chr12 69326458 - LYZ chr12 69743888 + Exonic hg19 LUAD TCGA-50-5049-01A 6 40 In-Frame Intra-chr q15 q15 Seq+ 35277 ChimerSeq STARFusion TCGA_RNA-Seq CPM-LOC100132735 CPM chr12 69326458 - LOC100132735 chr6 140180422 + Exonic hg19 LUAD TCGA-50-5049-01A 3 36 CDS-5'UTR Inter-chr q15 35278 ChimerSeq STARFusion TCGA_RNA-Seq EMP2-BCAR4 EMP2 chr16 10674406 - BCAR4 chr16 11914154 - Exonic hg19 LUAD TCGA-50-5049-01A 5 19 5'UTR-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 35279 ChimerSeq STARFusion TCGA_RNA-Seq CCDC28A-CLEC16A CCDC28A chr6 139101122 + CLEC16A chr16 11260245 + Exonic hg19 LUAD TCGA-50-5049-01A 2 12 In-Frame Inter-chr q24.1 p13.13 Seq+ 35280 ChimerSeq STARFusion TCGA_RNA-Seq CPM-CCT2 CPM chr12 69326458 - CCT2 chr12 69991418 + Exonic hg19 LUAD TCGA-50-5049-01A 2 9 In-Frame Intra-chr q15 q15 Seq+ 35281 ChimerSeq STARFusion TCGA_RNA-Seq DAB2IP-LAMC3 DAB2IP chr9 124529009 + LAMC3 chr9 133943465 + Exonic hg19 LUAD TCGA-50-5049-01A 2 2 Out-of-frame Intra-chr q33.2 Tumor suppressor gene q34.12 Seq+ 35282 ChimerSeq STARFusion TCGA_RNA-Seq TCF7L1-BRMS1L TCF7L1 chr2 85535037 + BRMS1L chr14 36340722 + Exonic hg19 LUAD TCGA-55-8615-01A 17 64 Out-of-frame Inter-chr p11.2 Oncogene Transcription factor q13.2 Seq+ 35283 ChimerSeq STARFusion TCGA_RNA-Seq YPEL2-HEATR6 YPEL2 chr17 57466829 + HEATR6 chr17 58145093 - Exonic hg19 LUAD TCGA-55-8615-01A 3 19 In-Frame Intra-chr q22 q23.1 Seq+ 35284 ChimerSeq STARFusion TCGA_RNA-Seq RAB1B-MTMR2 RAB1B chr11 66036164 + MTMR2 chr11 95598840 - Exonic hg19 LUAD TCGA-55-8615-01A 4 8 Out-of-frame Intra-chr q13.2 q21 Seq+ 35285 ChimerSeq STARFusion TCGA_RNA-Seq TMSB10-AKAP13 TMSB10 chr2 85133241 + AKAP13 chr15 86284371 + Exonic hg19 LUAD TCGA-55-8615-01A 5 1 Out-of-frame Inter-chr p11.2 q25.3 35286 ChimerSeq STARFusion TCGA_RNA-Seq SMURF2-LOC440434 SMURF2 chr17 62594500 - LOC440434 chr17 36375177 - Exonic hg19 LUAD TCGA-55-8615-01A 2 3 CDS-3'UTR Intra-chr q24.1 35287 ChimerSeq STARFusion TCGA_RNA-Seq EIF3C-RHOA EIF3C chr16 28700149 + RHOA chr3 49413024 - Exonic hg19 LUAD TCGA-55-8090-01A 2 1 5'UTR-5'UTR Inter-chr p11.2 p21.31 Oncogene Tumor suppressor gene 35288 ChimerSeq STARFusion TCGA_RNA-Seq HAUS6-LOC100507412 HAUS6 chr9 19070217 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LUAD TCGA-97-A4M5-01A 18 62 CDS-5'UTR Inter-chr p22.1 35289 ChimerSeq STARFusion TCGA_RNA-Seq ZNF292-SMIM8 ZNF292 chr6 87865477 + SMIM8 chr6 88046727 + Exonic hg19 LUAD TCGA-97-A4M5-01A 10 56 Out-of-frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q15 35290 ChimerSeq STARFusion TCGA_RNA-Seq UBE2K-FAM216B UBE2K chr4 39700010 + FAM216B chr13 43360899 + Exonic hg19 LUAD TCGA-86-A4P7-01A 16 31 In-Frame Inter-chr p14 q14.11 Seq+ 35291 ChimerSeq STARFusion TCGA_RNA-Seq NPC2-LTBP2 NPC2 chr14 74959896 - LTBP2 chr14 74970757 - Exonic hg19 LUAD TCGA-86-A4P7-01A 2 62 In-Frame Intra-chr q24.3 q24.3 Seq+ 35292 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-TTC17 FBXL20 chr17 37499433 - TTC17 chr11 43511789 + Exonic hg19 LUAD TCGA-86-A4P7-01A 4 21 Out-of-frame Inter-chr q12 p12 Seq+ 35293 ChimerSeq STARFusion TCGA_RNA-Seq ATXN7L1-AGBL3 ATXN7L1 chr7 105516258 - AGBL3 chr7 134819593 + Exonic hg19 LUAD TCGA-44-A479-01A 16 18 Out-of-frame Intra-chr q22.3 q33 Seq+ 35294 ChimerSeq STARFusion TCGA_RNA-Seq SNX6-MIPOL1 SNX6 chr14 35044962 - MIPOL1 chr14 37892060 + Exonic hg19 LUAD TCGA-44-A479-01A 3 10 In-Frame Intra-chr q13.1 q13.3 Seq+ 35295 ChimerSeq STARFusion TCGA_RNA-Seq EVA1C-MROH8 EVA1C chr21 33785321 + MROH8 chr20 35743740 - Exonic hg19 LUAD TCGA-44-A479-01A 4 5 Out-of-frame Inter-chr q22.11 q11.23 Seq+ 35296 ChimerSeq STARFusion TCGA_RNA-Seq EVA1C-MROH8 EVA1C chr21 33785321 + MROH8 chr20 35742548 - Exonic hg19 LUAD TCGA-44-A479-01A 2 5 Out-of-frame Inter-chr q22.11 q11.23 Seq+ 35297 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1324L-ABCA13 KIAA1324L chr7 86547758 - ABCA13 chr7 48308577 + Exonic hg19 LUAD TCGA-44-A479-01A 2 4 Out-of-frame Intra-chr q21.12 p12.3 Seq+ 35298 ChimerSeq STARFusion TCGA_RNA-Seq TRIM24-KIAA1324L TRIM24 chr7 138145657 + KIAA1324L chr7 86577238 - Exonic hg19 LUAD TCGA-44-A479-01A 2 3 In-Frame Intra-chr q33 Oncogene Tumor suppressor gene q21.12 Seq+ 35299 ChimerSeq STARFusion TCGA_RNA-Seq STK38-PXT1 STK38 chr6 36507849 - PXT1 chr6 36368361 - Exonic hg19 LUAD TCGA-44-3917-01B 4 4 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 35300 ChimerSeq STARFusion TCGA_RNA-Seq TTLL5-IFT43 TTLL5 chr14 76349245 + IFT43 chr14 76488670 + Exonic hg19 LUAD TCGA-MP-A4T8-01A 2 1 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 35301 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC20-MIPEP ZDHHC20 chr13 21987791 - MIPEP chr13 24330757 - Exonic hg19 LUAD TCGA-93-A4JO-01A 72 291 Out-of-frame Intra-chr q12.11 q12.12 Seq+ 35302 ChimerSeq STARFusion TCGA_RNA-Seq FRMD8-DPF2 FRMD8 chr11 65161570 + DPF2 chr11 65119154 + Exonic hg19 LUAD TCGA-93-A4JO-01A 3 51 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 35303 ChimerSeq STARFusion TCGA_RNA-Seq CD2AP-DVL1 CD2AP chr6 47445984 + DVL1 chr1 1278138 - Exonic hg19 LUAD TCGA-93-A4JO-01A 2 8 Out-of-frame Inter-chr p12.3 p36.33 Seq+ 35304 ChimerSeq STARFusion TCGA_RNA-Seq SDC2-LOC286186 SDC2 chr8 97506559 + LOC286186 chr8 66447099 - Exonic hg19 LUAD TCGA-55-7725-01A 4 15 CDS-3'UTR Intra-chr q22.1 35305 ChimerSeq STARFusion TCGA_RNA-Seq LAPTM4B-ARFGEF1 LAPTM4B chr8 98788336 + ARFGEF1 chr8 68214701 - Exonic hg19 LUAD TCGA-55-7725-01A 3 1 Out-of-frame Intra-chr q22.1 q13.2 Seq+ 35306 ChimerSeq STARFusion TCGA_RNA-Seq MON2-USP15 MON2 chr12 62861098 + USP15 chr12 62783211 + Exonic hg19 LUAD TCGA-MP-A4TF-01A 2 6 In-Frame Intra-chr q14.1 q14.1 Seq+ 35307 ChimerSeq STARFusion TCGA_RNA-Seq CLIC2-VPS39 CLIC2 chrX 154563680 - VPS39 chr15 42470536 - Exonic hg19 LUAD TCGA-67-3771-01A 13 68 Out-of-frame Inter-chr q28 q15.1 Seq+ 35308 ChimerSeq STARFusion TCGA_RNA-Seq RALGAPA2-LOC100507412 RALGAPA2 chr20 20693018 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 LUAD TCGA-67-3771-01A 13 64 CDS-5'UTR Inter-chr p11.23 35309 ChimerSeq STARFusion TCGA_RNA-Seq RPLP2-TALDO1 RPLP2 chr11 811645 + TALDO1 chr11 755879 + Exonic hg19 LUAD TCGA-67-3771-01A 14 59 5'UTR-CDS Intra-chr p15.5 p15.5 Seq+ 35310 ChimerSeq STARFusion TCGA_RNA-Seq DYRK1A-TTC3 DYRK1A chr21 38792686 + TTC3 chr21 38560796 + Exonic hg19 LUAD TCGA-67-3771-01A 2 21 Out-of-frame Intra-chr q22.13 CMGC:DYRK q22.13 Seq+ 35311 ChimerSeq STARFusion TCGA_RNA-Seq MED13-BRIP1 MED13 chr17 60069901 - BRIP1 chr17 59770873 - Exonic hg19 LUAD TCGA-67-3771-01A 3 15 Out-of-frame Intra-chr q23.2 q23.2 Oncogene Seq+ 35312 ChimerSeq STARFusion TCGA_RNA-Seq BIRC6-YIPF4 BIRC6 chr2 32664754 + YIPF4 chr2 32515552 + Exonic hg19 LUAD TCGA-67-3771-01A 2 11 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 35313 ChimerSeq STARFusion TCGA_RNA-Seq LINC00297-UBL3 LINC00297 chr13 30462166 - UBL3 chr13 30351400 - Exonic hg19 LUAD TCGA-67-3771-01A 2 0 Out-of-frame Intra-chr q12.3 q12.3 35314 ChimerSeq STARFusion TCGA_RNA-Seq THRAP3-ERI3 THRAP3 chr1 36690106 + ERI3 chr1 44778900 - Exonic hg19 LUAD TCGA-71-8520-01A 7 24 5'UTR-CDS Intra-chr p34.3 p34.1 Seq+ 35315 ChimerSeq STARFusion TCGA_RNA-Seq TMEM39B-C1orf94 TMEM39B chr1 32542919 + C1orf94 chr1 34662826 + Exonic hg19 LUAD TCGA-71-8520-01A 6 24 In-Frame Intra-chr p35.2 p35.1 Seq+ 35316 ChimerSeq STARFusion TCGA_RNA-Seq SNIP1-PUM1 SNIP1 chr1 38018246 - PUM1 chr1 31501711 - Exonic hg19 LUAD TCGA-71-8520-01A 3 17 In-Frame Intra-chr p34.3 p35.2 Seq+ 35317 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB8OS-ERI3 ZBTB8OS chr1 33093109 - ERI3 chr1 44750579 - Exonic hg19 LUAD TCGA-71-8520-01A 2 14 Out-of-frame Intra-chr p35.1 p34.1 Seq+ 35318 ChimerSeq STARFusion TCGA_RNA-Seq POFUT1-ITCH POFUT1 chr20 30804524 + ITCH chr20 33030013 + Exonic hg19 LUAD TCGA-50-6590-01A 13 34 In-Frame Intra-chr q11.21 q11.22 Seq+ 35319 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D14-BRSK2 TBC1D14 chr4 6925838 + BRSK2 chr11 1457270 + Exonic hg19 LUAD TCGA-50-6590-01A 5 1 Out-of-frame Inter-chr p16.1 p15.5 CAMK:CAMKL Seq+ 35320 ChimerSeq STARFusion TCGA_RNA-Seq C3orf27-SCNM1 C3orf27 chr3 128294109 - SCNM1 chr1 151138947 + Exonic hg19 LUAD TCGA-05-4425-01A 3 0 5'UTR-5'UTR Inter-chr q21.3 35321 ChimerSeq STARFusion TCGA_RNA-Seq KDM4B-AKAP8L KDM4B chr19 5144913 + AKAP8L chr19 15491423 - Exonic hg19 LUAD TCGA-49-4486-01A 29 124 In-Frame Intra-chr p13.3 p13.12 Transcription factor Seq+ 35322 ChimerSeq STARFusion TCGA_RNA-Seq ADCK4-AKAP8 ADCK4 chr19 41201894 - AKAP8 chr19 15469873 - Exonic hg19 LUAD TCGA-49-4486-01A 19 77 In-Frame Intra-chr Atypical:ABC1 p13.12 Transcription factor Seq+ 35323 ChimerSeq STARFusion TCGA_RNA-Seq SFTPB-SIPA1L3 SFTPB chr2 85892728 - SIPA1L3 chr19 38697883 + Exonic hg19 LUAD TCGA-49-4486-01A 5 1 Out-of-frame Inter-chr p11.2 q13.13 35324 ChimerSeq STARFusion TCGA_RNA-Seq LOC100133286-CBR3 LOC100133286 chr21 37442572 - CBR3 chr21 37507699 + Exonic hg19 LUAD TCGA-49-4486-01A 4 3 Out-of-frame Intra-chr q22.12 35325 ChimerSeq STARFusion TCGA_RNA-Seq CD2AP-NFKBIE CD2AP chr6 47445984 + NFKBIE chr6 44228276 - Exonic hg19 LUAD TCGA-05-4402-01A 15 53 In-Frame Intra-chr p12.3 p21.1 Seq+ 35326 ChimerSeq STARFusion TCGA_RNA-Seq ZNF679-VOPP1 ZNF679 chr7 63709534 + VOPP1 chr7 55588823 - Exonic hg19 LUAD TCGA-05-4402-01A 7 57 In-Frame Intra-chr q11.21 Transcription factor p11.2 Seq+ 35327 ChimerSeq STARFusion TCGA_RNA-Seq LPCAT1-TERT LPCAT1 chr5 1523825 - TERT chr5 1282739 - Exonic hg19 LUAD TCGA-05-4402-01A 8 14 Out-of-frame Intra-chr p15.33 Oncogene Seq+ 35328 ChimerSeq STARFusion TCGA_RNA-Seq IL34-ST3GAL2 IL34 chr16 70613952 + ST3GAL2 chr16 70433436 - Exonic hg19 LUAD TCGA-05-4402-01A 3 6 5'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 35329 ChimerSeq STARFusion TCGA_RNA-Seq ZNF618-SUSD1 ZNF618 chr9 116731440 + SUSD1 chr9 114804240 - Exonic hg19 LUAD TCGA-05-4402-01A 2 4 Out-of-frame Intra-chr q32 Transcription factor q32 Seq+ 35330 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-ROS1 CLTC chr17 57768072 + ROS1 chr6 117642557 - Exonic hg19 LUAD TCGA-44-2665-01A 15 64 In-Frame Inter-chr q23.1 q22.1 Oncogene Seq+ 35331 ChimerSeq STARFusion TCGA_RNA-Seq ROS1-CLTC ROS1 chr6 117609849 - CLTC chr17 57771089 + Exonic hg19 LUAD TCGA-44-2665-01A 11 47 Out-of-frame Inter-chr q22.1 Oncogene q23.1 Seq+ 35332 ChimerSeq STARFusion TCGA_RNA-Seq SNORA50-CNOT1 SNORA50 chr16 58593708 - CNOT1 chr16 58594266 - Exonic hg19 LUAD TCGA-44-2665-01A 7 15 3'UTR-CDS Intra-chr q23.3 q21 35333 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 LUAD TCGA-44-2665-01A 3 0 3'UTR-5'UTR Intra-chr q34 35334 ChimerSeq STARFusion TCGA_RNA-Seq PPIP5K1-CATSPER2 PPIP5K1 chr15 43857065 - CATSPER2 chr15 43939665 - Exonic hg19 LUAD TCGA-44-2665-01A 2 1 In-Frame Intra-chr q15.3 q15.3 35335 ChimerSeq STARFusion TCGA_RNA-Seq UBE2D2-SND1 UBE2D2 chr5 138941400 + SND1 chr7 127714554 + Exonic hg19 LUAD TCGA-95-7562-01A 11 76 In-Frame Inter-chr q31.2 q32.1 Seq+ 35336 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPH3-ATAD1 HNRNPH3 chr10 70091973 + ATAD1 chr10 89574369 - Exonic hg19 LUAD TCGA-95-7562-01A 9 30 5'UTR-5'UTR Intra-chr q21.3 Seq+ 35337 ChimerSeq STARFusion TCGA_RNA-Seq MED26-HSH2D MED26 chr19 16738683 - HSH2D chr19 16263362 + Exonic hg19 LUAD TCGA-69-7973-01A 15 30 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 35338 ChimerSeq STARFusion TCGA_RNA-Seq ACSL3-PHGDH ACSL3 chr2 223725976 + PHGDH chr1 120263793 + Exonic hg19 LUAD TCGA-69-7979-01A 74 94 5'UTR-CDS Inter-chr q36.1 p12 Seq+ 35339 ChimerSeq STARFusion TCGA_RNA-Seq DOCK9-SPACA7 DOCK9 chr13 99532801 - SPACA7 chr13 113086758 + Exonic hg19 LUAD TCGA-69-7979-01A 21 165 Out-of-frame Intra-chr q32.3 Seq+ 35340 ChimerSeq STARFusion TCGA_RNA-Seq ZNF638-C2orf74 ZNF638 chr2 71645769 + C2orf74 chr2 61389977 + Exonic hg19 LUAD TCGA-69-7979-01A 20 29 In-Frame Intra-chr p13.3 p15 Seq+ 35341 ChimerSeq STARFusion TCGA_RNA-Seq ABCC4-COL4A2 ABCC4 chr13 95822786 - COL4A2 chr13 111077081 + Exonic hg19 LUAD TCGA-69-7979-01A 7 55 In-Frame Intra-chr q32.1 q34 Seq+ 35342 ChimerSeq STARFusion TCGA_RNA-Seq GRTP1-COL4A2 GRTP1 chr13 113999178 - COL4A2 chr13 111154015 + Exonic hg19 LUAD TCGA-69-7979-01A 3 49 In-Frame Intra-chr q34 q34 Seq+ 35343 ChimerSeq STARFusion TCGA_RNA-Seq LMO7-ITGBL1 LMO7 chr13 76412332 + ITGBL1 chr13 102220050 + Exonic hg19 LUAD TCGA-69-7979-01A 2 53 In-Frame Intra-chr q22.2 q33.1 Seq+ 35344 ChimerSeq STARFusion TCGA_RNA-Seq TUBGCP3-ATP11A TUBGCP3 chr13 113158346 - ATP11A chr13 113490492 + Exonic hg19 LUAD TCGA-69-7979-01A 5 37 Out-of-frame Intra-chr q34 Seq+ 35345 ChimerSeq STARFusion TCGA_RNA-Seq FARP1-UCHL3 FARP1 chr13 98795746 + UCHL3 chr13 76134889 + Exonic hg19 LUAD TCGA-69-7979-01A 9 19 5'UTR-CDS Intra-chr q32.2 q22.2 Seq+ 35346 ChimerSeq STARFusion TCGA_RNA-Seq S1PR2-RAVER1 S1PR2 chr19 10341880 - RAVER1 chr19 10429916 - Exonic hg19 LUAD TCGA-69-7979-01A 9 16 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 35347 ChimerSeq STARFusion TCGA_RNA-Seq C11orf49-F2 C11orf49 chr11 47008861 + F2 chr11 46747409 + Exonic hg19 LUAD TCGA-69-7979-01A 7 11 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 35348 ChimerSeq STARFusion TCGA_RNA-Seq YAP1-C11orf70 YAP1 chr11 101985125 + C11orf70 chr11 101918546 + Exonic hg19 LUAD TCGA-69-7979-01A 7 9 In-Frame Intra-chr q22.1 Tumor suppressor gene q22.1 Seq+ 35349 ChimerSeq STARFusion TCGA_RNA-Seq MIOS-GTF2IRD2B MIOS chr7 7607754 + GTF2IRD2B chr7 74536692 + Exonic hg19 LUAD TCGA-69-7979-01A 5 10 5'UTR-CDS Intra-chr p21.3 q11.23 Transcription factor Seq+ 35350 ChimerSeq STARFusion TCGA_RNA-Seq GPR180-CARKD GPR180 chr13 95264644 + CARKD chr13 111286892 + Exonic hg19 LUAD TCGA-69-7979-01A 6 2 Out-of-frame Intra-chr q32.1 35351 ChimerSeq STARFusion TCGA_RNA-Seq DNMT1-RAVER1 DNMT1 chr19 10254442 - RAVER1 chr19 10441202 - Exonic hg19 LUAD TCGA-69-7979-01A 5 5 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene Transcription factor p13.2 Seq+ 35352 ChimerSeq STARFusion TCGA_RNA-Seq SNX29-TNFRSF17 SNX29 chr16 12172772 + TNFRSF17 chr16 12060052 + Exonic hg19 LUAD TCGA-69-7979-01A 4 9 In-Frame Intra-chr p13.13 p13.13 Seq+ 35353 ChimerSeq STARFusion TCGA_RNA-Seq EIF3L-VPS13B EIF3L chr22 38251651 + VPS13B chr8 100861004 + Exonic hg19 LUAD TCGA-69-7979-01A 3 6 Out-of-frame Inter-chr q13.1 q22.2 Seq+ 35354 ChimerSeq STARFusion TCGA_RNA-Seq FARP1-NALCN FARP1 chr13 98865667 + NALCN chr13 101944717 - Exonic hg19 LUAD TCGA-69-7979-01A 2 9 Out-of-frame Intra-chr q32.2 q33.1 Seq+ 35355 ChimerSeq STARFusion TCGA_RNA-Seq YAP1-C11orf70 YAP1 chr11 101985125 + C11orf70 chr11 101929611 + Exonic hg19 LUAD TCGA-69-7979-01A 2 9 Out-of-frame Intra-chr q22.1 Tumor suppressor gene q22.1 Seq+ 35356 ChimerSeq STARFusion TCGA_RNA-Seq MAPK1-ARHGEF7 MAPK1 chr22 22221612 - ARHGEF7 chr13 111870026 + Exonic hg19 LUAD TCGA-69-7979-01A 2 8 Out-of-frame Inter-chr q11.22 Oncogene q34 Seq+ 35357 ChimerSeq STARFusion TCGA_RNA-Seq PHF21A-PACSIN3 PHF21A chr11 46098305 - PACSIN3 chr11 47204620 - Exonic hg19 LUAD TCGA-69-7979-01A 3 4 CDS-5'UTR Intra-chr p11.2 Transcription factor p11.2 Seq+ 35358 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-NTNG1 MKL1 chr22 41032482 - NTNG1 chr1 107937776 + Exonic hg19 LUAD TCGA-69-7979-01A 2 7 5'UTR-CDS Inter-chr q13.2 p13.3 Seq+ 35359 ChimerSeq STARFusion TCGA_RNA-Seq SCFD2-SCGB2B3P SCFD2 chr4 54011500 - SCGB2B3P chr19 35136791 + Exonic hg19 LUAD TCGA-69-7979-01A 3 3 CDS-5'UTR Inter-chr q12 q13.11 35360 ChimerSeq STARFusion TCGA_RNA-Seq SMEK1-FBLN5 SMEK1 chr14 91975850 - FBLN5 chr14 92403545 - Exonic hg19 LUAD TCGA-69-7979-01A 2 7 In-Frame Intra-chr q32.12 Seq+ 35361 ChimerSeq STARFusion TCGA_RNA-Seq CLOCK-PDGFRA CLOCK chr4 56376079 - PDGFRA chr4 55153597 + Exonic hg19 LUAD TCGA-69-7979-01A 2 6 5'UTR-CDS Intra-chr q12 Transcription factor q12 Oncogene Seq+ 35362 ChimerSeq STARFusion TCGA_RNA-Seq ATOH8-VAMP5 ATOH8 chr2 85991305 + VAMP5 chr2 85818848 + Exonic hg19 LUAD TCGA-49-4487-01A 5 23 In-Frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 35363 ChimerSeq STARFusion TCGA_RNA-Seq BAG2-RNF114 BAG2 chr6 57037608 + RNF114 chr20 48565785 + Exonic hg19 LUAD TCGA-49-4487-01A 2 19 Out-of-frame Inter-chr p12.1 q13.13 Seq+ 35364 ChimerSeq STARFusion TCGA_RNA-Seq LRRC16A-SLC17A1 LRRC16A chr6 25285137 + SLC17A1 chr6 25820143 - Exonic hg19 LUAD TCGA-49-4487-01A 2 3 In-Frame Intra-chr p22.2 Seq+ 35365 ChimerSeq STARFusion TCGA_RNA-Seq SPATA2-GSTA5 SPATA2 chr20 48531917 - GSTA5 chr6 52697788 - Exonic hg19 LUAD TCGA-49-4487-01A 2 2 5'UTR-CDS Inter-chr q13.13 p12.2 Seq+ 35366 ChimerSeq STARFusion TCGA_RNA-Seq AMBRA1-TAGLN AMBRA1 chr11 46615378 - TAGLN chr11 117073718 + Exonic hg19 LUAD TCGA-86-8055-01A 2 22 5'UTR-5'UTR Intra-chr p11.2 q23.3 Tumor suppressor gene Seq+ 35367 ChimerSeq STARFusion TCGA_RNA-Seq LAMA3-FHOD3 LAMA3 chr18 21294036 + FHOD3 chr18 34261399 + Exonic hg19 LUAD TCGA-86-8055-01A 2 1 Out-of-frame Intra-chr q11.2 q12.2 35368 ChimerSeq STARFusion TCGA_RNA-Seq ITCH-MYL9 ITCH chr20 33080402 + MYL9 chr20 35176435 + Exonic hg19 LUAD TCGA-55-7815-01A 4 18 In-Frame Intra-chr q11.22 q11.23 Seq+ 35369 ChimerSeq STARFusion TCGA_RNA-Seq CEP170-SDCCAG8 CEP170 chr1 243418342 - SDCCAG8 chr1 243468015 + Exonic hg19 LUAD TCGA-73-4662-01A 18 35 5'UTR-CDS Intra-chr Seq+ 35370 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 LUAD TCGA-73-4662-01A 6 14 3'UTR-5'UTR Intra-chr q34 35371 ChimerSeq STARFusion TCGA_RNA-Seq TOP1-LPHN3 TOP1 chr20 39725981 + LPHN3 chr4 62758374 + Exonic hg19 LUAD TCGA-73-4662-01A 5 16 Out-of-frame Inter-chr q12 Oncogene Seq+ 35372 ChimerSeq STARFusion TCGA_RNA-Seq SHROOM2-BHLHE41 SHROOM2 chrX 9754750 + BHLHE41 chr12 26277515 - Exonic hg19 LUAD TCGA-73-4662-01A 4 14 Out-of-frame Inter-chr p22.2 p12.1 Tumor suppressor gene Transcription factor Seq+ 35373 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-ATP2A2 NIPBL chr5 36877280 + ATP2A2 chr12 110720409 + Exonic hg19 LUAD TCGA-95-7043-01A 8 8 5'UTR-CDS Inter-chr p13.2 q24.11 Seq+ 35374 ChimerSeq STARFusion TCGA_RNA-Seq THRA-PSMD3 THRA chr17 38245586 + PSMD3 chr17 38140547 + Exonic hg19 LUAD TCGA-95-7043-01A 2 5 Out-of-frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Seq+ 35375 ChimerSeq STARFusion TCGA_RNA-Seq NUF2-TIMM17A NUF2 chr1 163317728 + TIMM17A chr1 201926409 + Exonic hg19 LUAD TCGA-78-7159-01A 3 5 In-Frame Intra-chr q23.3 q32.1 Seq+ 35376 ChimerSeq STARFusion TCGA_RNA-Seq FAM53B-BBIP1 FAM53B chr10 126384727 - BBIP1 chr10 112661370 - Exonic hg19 LUAD TCGA-78-7145-01A 3 18 In-Frame Intra-chr q26.13 q25.2 Seq+ 35377 ChimerSeq STARFusion TCGA_RNA-Seq YWHAZ-HHLA1 YWHAZ chr8 101960824 - HHLA1 chr8 133092213 - Exonic hg19 LUAD TCGA-78-7145-01A 2 9 Out-of-frame Intra-chr q22.3 q24.22 Seq+ 35378 ChimerSeq STARFusion TCGA_RNA-Seq SRFBP1-PRM1 SRFBP1 chr5 121330365 + PRM1 chr16 11375087 - Exonic hg19 LUAD TCGA-50-5944-01A 22 73 Out-of-frame Inter-chr q23.1 p13.13 Seq+ 35379 ChimerSeq STARFusion TCGA_RNA-Seq SRP68-RCAN1 SRP68 chr17 74060057 - RCAN1 chr21 35896008 - Exonic hg19 LUAD TCGA-50-5944-01A 5 25 In-Frame Inter-chr q25.1 q22.12 Seq+ 35380 ChimerSeq STARFusion TCGA_RNA-Seq MYO10-ZNF622 MYO10 chr5 16877718 - ZNF622 chr5 16458738 - Exonic hg19 LUAD TCGA-50-5944-01A 2 16 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 35381 ChimerSeq STARFusion TCGA_RNA-Seq ZNF205-UBE2I ZNF205 chr16 3163488 + UBE2I chr16 1370439 + Exonic hg19 LUAD TCGA-50-5944-01A 5 1 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 35382 ChimerSeq STARFusion TCGA_RNA-Seq HLCS-GRIK1 HLCS chr21 38269160 - GRIK1 chr21 30971257 - Exonic hg19 LUAD TCGA-50-5944-01A 2 3 Out-of-frame Intra-chr q22.13 q21.3 Seq+ 35383 ChimerSeq STARFusion TCGA_RNA-Seq UCKL1-ZBTB46 UCKL1 chr20 62575750 - ZBTB46 chr20 62378654 - Exonic hg19 LUAD TCGA-05-4418-01A 2 4 In-Frame Intra-chr q13.33 q13.33 Transcription factor Seq+ 35384 ChimerSeq STARFusion TCGA_RNA-Seq MIDN-ABCA7 MIDN chr19 1251900 + ABCA7 chr19 1061781 + Exonic hg19 LUAD TCGA-05-4418-01A 2 1 In-Frame Intra-chr p13.3 p13.3 Seq+ 35385 ChimerSeq STARFusion TCGA_RNA-Seq RBMXL2-RNA45S5 RBMXL2 chr11 7110859 + RNA45S5 chrUn_gl000220 114565 + Exonic hg19 LUAD TCGA-44-6775-01A 38 0 Out-of-frame Inter-chr p15.4 35386 ChimerSeq STARFusion TCGA_RNA-Seq SEMA3F-RBM6 SEMA3F chr3 50214294 + RBM6 chr3 50036873 + Exonic hg19 LUAD TCGA-55-6969-01A 6 41 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene Seq+ 35387 ChimerSeq STARFusion TCGA_RNA-Seq RAB11FIP1-ATP6V1H RAB11FIP1 chr8 37720255 - ATP6V1H chr8 54714456 - Exonic hg19 LUAD TCGA-55-6969-01A 4 48 3'UTR-CDS Intra-chr p11.23 q11.23 Seq+ 35388 ChimerSeq STARFusion TCGA_RNA-Seq RAB11FIP1-ATP6V1H RAB11FIP1 chr8 37720440 - ATP6V1H chr8 54714456 - Exonic hg19 LUAD TCGA-55-6969-01A 4 48 In-Frame Intra-chr p11.23 q11.23 Seq+ 35389 ChimerSeq STARFusion TCGA_RNA-Seq SEMA3F-RBM6 SEMA3F chr3 50212621 + RBM6 chr3 50085678 + Exonic hg19 LUAD TCGA-55-6969-01A 5 41 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene Seq+ 35390 ChimerSeq STARFusion TCGA_RNA-Seq SEMA3F-RBM6 SEMA3F chr3 50211783 + RBM6 chr3 50085678 + Exonic hg19 LUAD TCGA-55-6969-01A 4 41 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene Seq+ 35391 ChimerSeq STARFusion TCGA_RNA-Seq SEMA3F-RBM6 SEMA3F chr3 50214294 + RBM6 chr3 50085678 + Exonic hg19 LUAD TCGA-55-6969-01A 2 41 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene Seq+ 35392 ChimerSeq STARFusion TCGA_RNA-Seq ZNF229-ERCC1 ZNF229 chr19 44951701 - ERCC1 chr19 45926639 - Exonic hg19 LUAD TCGA-55-6969-01A 3 20 5'UTR-5'UTR Intra-chr q13.31 Transcription factor q13.32 Oncogene Seq+ 35393 ChimerSeq STARFusion TCGA_RNA-Seq PPP3R1-C1D PPP3R1 chr2 68479257 - C1D chr2 68274451 - Exonic hg19 LUAD TCGA-55-6969-01A 5 6 CDS-5'UTR Intra-chr p14 p14 Seq+ 35394 ChimerSeq STARFusion TCGA_RNA-Seq IPO7-AKIP1 IPO7 chr11 9442245 + AKIP1 chr11 8936373 + Exonic hg19 LUAD TCGA-55-6969-01A 3 10 In-Frame Intra-chr p15.4 p15.4 Seq+ 35395 ChimerSeq STARFusion TCGA_RNA-Seq IPO7-AKIP1 IPO7 chr11 9442245 + AKIP1 chr11 8934000 + Exonic hg19 LUAD TCGA-55-6969-01A 2 10 In-Frame Intra-chr p15.4 p15.4 Seq+ 35396 ChimerSeq STARFusion TCGA_RNA-Seq PACS2-C14orf180 PACS2 chr14 105821514 + C14orf180 chr14 105052752 + Exonic hg19 LUAD TCGA-55-6969-01A 2 8 CDS-5'UTR Intra-chr q32.33 q32.33 Seq+ 35397 ChimerSeq STARFusion TCGA_RNA-Seq DNA2-CTNND2 DNA2 chr10 70218861 - CTNND2 chr5 11365002 - Exonic hg19 LUAD TCGA-55-6969-01A 3 1 Out-of-frame Inter-chr q21.3 p15.2 35398 ChimerSeq STARFusion TCGA_RNA-Seq TUBD1-TOM1L1 TUBD1 chr17 57963444 - TOM1L1 chr17 52990027 + Exonic hg19 LUAD TCGA-55-6969-01A 2 5 Out-of-frame Intra-chr q23.1 q22 Seq+ 35399 ChimerSeq STARFusion TCGA_RNA-Seq KIF15-ZKSCAN7 KIF15 chr3 44803376 + ZKSCAN7 chr3 44609799 + Exonic hg19 LUAD TCGA-55-6969-01A 2 4 Out-of-frame Intra-chr Transcription factor 35400 ChimerSeq STARFusion TCGA_RNA-Seq C1orf95-VTI1A C1orf95 chr1 226736807 + VTI1A chr10 114286846 + Exonic hg19 LUAD TCGA-55-6969-01A 2 3 Out-of-frame Inter-chr q25.2 Seq+ 35401 ChimerSeq STARFusion TCGA_RNA-Seq EZR-ROS1 EZR chr6 159191796 - ROS1 chr6 117645578 - Exonic hg19 LUAD TCGA-NJ-A7XG 106 242 In-Frame Intra-chr q25.3 q22.1 Oncogene KB Pub Seq+ 35402 ChimerSeq STARFusion TCGA_RNA-Seq POM121-SFTPB POM121 chr7 72412844 + SFTPB chr2 85888595 - Exonic hg19 LUAD TCGA-NJ-A7XG 9 1 Out-of-frame Inter-chr q11.23 p11.2 35403 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A17-ST13 SLC25A17 chr22 41169941 - ST13 chr22 41246884 - Exonic hg19 LUAD TCGA-55-7911-01A 7 33 In-Frame Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 35404 ChimerSeq STARFusion TCGA_RNA-Seq MMP28-KCNJ12 MMP28 chr17 34105892 - KCNJ12 chr17 21311831 + Exonic hg19 LUAD TCGA-55-7911-01A 3 12 CDS-5'UTR Intra-chr q12 p11.2 Seq+ 35405 ChimerSeq STARFusion TCGA_RNA-Seq MMP28-KCNJ18 MMP28 chr17 34105892 - KCNJ18 chr17 21311831 + Exonic hg19 LUAD TCGA-55-7911-01A 3 12 CDS-5'UTR Intra-chr q12 p11.2 Seq+ 35406 ChimerSeq STARFusion TCGA_RNA-Seq UBQLN1-KLC2 UBQLN1 chr9 86318437 - KLC2 chr11 66033435 + Exonic hg19 LUAD TCGA-MP-A4T6-01A 19 78 Out-of-frame Inter-chr q21.32 q13.2 Seq+ 35407 ChimerSeq STARFusion TCGA_RNA-Seq CDC42BPB-C14orf182 CDC42BPB chr14 103523336 - C14orf182 chr14 50459591 - Exonic hg19 LUAD TCGA-MP-A4T6-01A 3 6 Out-of-frame Intra-chr q32.32 Seq+ 35408 ChimerSeq STARFusion TCGA_RNA-Seq PUS7L-C12orf70 PUS7L chr12 44148139 - C12orf70 chr12 27648613 + Exonic hg19 LUAD TCGA-MP-A4T6-01A 3 2 Out-of-frame Intra-chr q12 Seq+ 35409 ChimerSeq STARFusion TCGA_RNA-Seq FOXN3-SLC25A21 FOXN3 chr14 89656728 - SLC25A21 chr14 37344209 - Exonic hg19 LUAD TCGA-44-7669-01A 5 64 In-Frame Intra-chr q32.11 Transcription factor q13.3 Seq+ 35410 ChimerSeq STARFusion TCGA_RNA-Seq CDH2-LAMA3 CDH2 chr18 25727637 - LAMA3 chr18 21393021 + Exonic hg19 LUAD TCGA-44-7669-01A 5 60 In-Frame Intra-chr q12.1 Oncogene q11.2 Seq+ 35411 ChimerSeq STARFusion TCGA_RNA-Seq CDH2-LAMA3 CDH2 chr18 25727637 - LAMA3 chr18 21394367 + Exonic hg19 LUAD TCGA-44-7669-01A 3 60 Out-of-frame Intra-chr q12.1 Oncogene q11.2 Seq+ 35412 ChimerSeq STARFusion TCGA_RNA-Seq FOXN3-SLC25A21 FOXN3 chr14 89747294 - SLC25A21 chr14 37344209 - Exonic hg19 LUAD TCGA-44-7669-01A 2 64 In-Frame Intra-chr q32.11 Transcription factor q13.3 Seq+ 35413 ChimerSeq STARFusion TCGA_RNA-Seq SARNP-PTMS SARNP chr12 56182859 - PTMS chr12 6878769 + Exonic hg19 LUAD TCGA-44-7669-01A 6 41 In-Frame Intra-chr q13.2 p13.31 Seq+ 35414 ChimerSeq STARFusion TCGA_RNA-Seq APLP2-SPCS2 APLP2 chr11 129997735 + SPCS2 chr11 74676079 + Exonic hg19 LUAD TCGA-44-7669-01A 2 2 In-Frame Intra-chr q24.3 q13.4 Seq+ 35415 ChimerSeq STARFusion TCGA_RNA-Seq SART3-CORO1C SART3 chr12 108929135 - CORO1C chr12 109042796 - Exonic hg19 LUAD TCGA-44-7669-01A 2 1 In-Frame Intra-chr q23.3 q24.11 Seq+ 35416 ChimerSeq STARFusion TCGA_RNA-Seq SORL1-FAM118B SORL1 chr11 121498476 + FAM118B chr11 126131320 + Exonic hg19 LUAD TCGA-44-7669-01A 2 1 In-Frame Intra-chr q24.1 q24.2 35417 ChimerSeq STARFusion TCGA_RNA-Seq RARA-CDC6 RARA chr17 38465538 + CDC6 chr17 38457080 + Exonic hg19 LUAD TCGA-95-7948-01A 18 40 5'UTR-3'UTR Intra-chr q21.2 Oncogene Transcription factor q21.2 Seq+ 35418 ChimerSeq STARFusion TCGA_RNA-Seq GTF2E2-ACE GTF2E2 chr8 30510950 - ACE chr17 61561691 + Exonic hg19 LUAD TCGA-95-7948-01A 5 10 Out-of-frame Inter-chr p12 q23.3 Seq+ 35419 ChimerSeq STARFusion TCGA_RNA-Seq NDUFS6-RNA45S5 NDUFS6 chr5 1816049 + RNA45S5 chrUn_gl000220 113669 + Exonic hg19 LUAD TCGA-95-7948-01A 3 1 Out-of-frame Inter-chr p15.33 35420 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 LUAD TCGA-J2-8192-01A 2 2 3'UTR-5'UTR Intra-chr q34 35421 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-MARCH9 TSFM chr12 58180945 + 2019_ 3_ 9_ chr12 58151891 + Exonic hg19 LUAD TCGA-64-5775-01A 9 37 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 35422 ChimerSeq STARFusion TCGA_RNA-Seq ROR1-DNAJC6 ROR1 chr1 64643672 + DNAJC6 chr1 65830318 + Exonic hg19 LUAD TCGA-64-5775-01A 3 8 In-Frame Intra-chr p31.3 TK:Ror p31.3 KB Pub Seq+ 35423 ChimerSeq STARFusion TCGA_RNA-Seq LRRC45-GNB1 LRRC45 chr17 79987061 + GNB1 chr1 1749314 - Exonic hg19 LUAD TCGA-44-6778-01A 10 27 In-Frame Inter-chr q25.3 p36.33 Seq+ 35424 ChimerSeq STARFusion TCGA_RNA-Seq EHD1-BATF2 EHD1 chr11 64641893 - BATF2 chr11 64757284 - Exonic hg19 LUAD TCGA-44-6778-01A 4 23 Out-of-frame Intra-chr q13.1 q13.1 Tumor suppressor gene Transcription factor Seq+ 35425 ChimerSeq STARFusion TCGA_RNA-Seq ANLN-EEPD1 ANLN chr7 36436028 + EEPD1 chr7 36336602 + Exonic hg19 LUAD TCGA-44-6778-01A 4 21 In-Frame Intra-chr p14.2 p14.2 Seq+ 35426 ChimerSeq STARFusion TCGA_RNA-Seq ULK4-ANO10 ULK4 chr3 41925366 - ANO10 chr3 43408466 - Exonic hg19 LUAD TCGA-44-6778-01A 2 11 In-Frame Intra-chr p22.1 Other:ULK p21.33 Seq+ 35427 ChimerSeq STARFusion TCGA_RNA-Seq CDKAL1-E2F3 CDKAL1 chr6 20548936 + E2F3 chr6 20480077 + Exonic hg19 LUAD TCGA-44-6778-01A 4 0 Out-of-frame Intra-chr p22.3 p22.3 Tumor suppressor gene Transcription factor Seq+ 35428 ChimerSeq STARFusion TCGA_RNA-Seq GAS7-MYH1 GAS7 chr17 10101525 - MYH1 chr17 10415863 - Exonic hg19 LUAD TCGA-97-8172-01A 6 28 In-Frame Intra-chr p13.1 p13.1 Seq+ 35429 ChimerSeq STARFusion TCGA_RNA-Seq OTUD5-TEX101 OTUD5 chrX 48783123 - TEX101 chr19 43906918 + Exonic hg19 LUAD TCGA-97-8172-01A 2 0 CDS-5'UTR Inter-chr p11.23 q13.31 35430 ChimerSeq STARFusion TCGA_RNA-Seq MBNL1-SGSM3 MBNL1 chr3 152150709 + SGSM3 chr22 40796700 + Exonic hg19 LUAD TCGA-62-8395-01A 11 28 CDS-5'UTR Inter-chr q25.1 q13.1 Seq+ 35431 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-RTN4RL1 YWHAE chr17 1303341 - RTN4RL1 chr17 1841102 - Exonic hg19 LUAD TCGA-62-8395-01A 4 21 In-Frame Intra-chr p13.3 p13.3 Seq+ 35432 ChimerSeq STARFusion TCGA_RNA-Seq HMHA1-STK11 HMHA1 chr19 1066162 + STK11 chr19 1218416 + Exonic hg19 LUAD TCGA-62-8395-01A 6 11 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene 35433 ChimerSeq STARFusion TCGA_RNA-Seq STK11-SRFBP1 STK11 chr19 1207202 + SRFBP1 chr5 121354955 + Exonic hg19 LUAD TCGA-62-8395-01A 5 5 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene q23.1 Seq+ 35434 ChimerSeq STARFusion TCGA_RNA-Seq PGC-UBB PGC chr6 41708313 - UBB chr17 16284428 + Exonic hg19 LUAD TCGA-62-8395-01A 3 5 Out-of-frame Inter-chr p21.1 p11.2 Seq+ 35435 ChimerSeq STARFusion TCGA_RNA-Seq LOC285629-ATP10B LOC285629 chr5 160362997 - ATP10B chr5 160212810 - Exonic hg19 LUAD TCGA-62-8395-01A 2 3 3'UTR-5'UTR Intra-chr q34 35436 ChimerSeq STARFusion TCGA_RNA-Seq FLJ43663-PRTG FLJ43663 chr7 130737184 - PRTG chr15 55976129 - Exonic hg19 LUAD TCGA-44-2661-01A 3 4 3'UTR-CDS Inter-chr q21.3 35437 ChimerSeq STARFusion TCGA_RNA-Seq CDKL2-CXCL11 CDKL2 chr4 76551005 - CXCL11 chr4 76957217 - Exonic hg19 LUAD TCGA-55-7914-01A 11 67 CDS-5'UTR Intra-chr q21.1 CMGC:CDKL q21.1 Seq+ 35438 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF26-IGLL5 ARHGEF26 chr3 153838995 + IGLL5 chr22 23235962 + Exonic hg19 LUAD TCGA-55-7914-01A 6 0 Out-of-frame Inter-chr q11.22 35439 ChimerSeq STARFusion TCGA_RNA-Seq KPNA1-PARP9 KPNA1 chr3 122215284 - PARP9 chr3 122255920 - Exonic hg19 LUAD TCGA-38-6178-01A 16 31 Out-of-frame Intra-chr q21.1 q21.1 35440 ChimerSeq STARFusion TCGA_RNA-Seq APMAP-ZNF337 APMAP chr20 24964539 - ZNF337 chr20 25667102 - Exonic hg19 LUAD TCGA-38-6178-01A 2 20 Out-of-frame Intra-chr p11.21 p11.21 Transcription factor Seq+ 35441 ChimerSeq STARFusion TCGA_RNA-Seq PTPRJ-FCER1G PTPRJ chr11 48134535 + FCER1G chr1 161187776 + Exonic hg19 LUAD TCGA-38-6178-01A 2 12 In-Frame Inter-chr p11.2 Tumor suppressor gene q23.3 Seq+ 35442 ChimerSeq STARFusion TCGA_RNA-Seq PTDSS1-PTK2 PTDSS1 chr8 97321850 + PTK2 chr8 141840625 - Exonic hg19 LUAD TCGA-38-6178-01A 2 3 In-Frame Intra-chr q22.1 q24.3 Seq+ 35443 ChimerSeq STARFusion TCGA_RNA-Seq STK3-CPQ STK3 chr8 99608260 - CPQ chr8 97797092 + Exonic hg19 LUAD TCGA-44-6775-01C 14 12 CDS-5'UTR Intra-chr q22.2 q22.1 Seq+ 35444 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1737000 + Exonic hg19 LUSC TCGA-22-4607 14 282 Out-of-frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 35445 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808738 + TACC3 chr4 1734261 + Exonic hg19 LUSC TCGA-22-4607 11 271 Out-of-frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 35446 ChimerSeq STARFusion TCGA_RNA-Seq DDX39A-CD97 DDX39A chr19 14520554 - CD97 chr19 14519300 + Exonic hg19 LUSC TCGA-22-4607 20 113 3'UTR-3'UTR Intra-chr p13.12 35447 ChimerSeq STARFusion TCGA_RNA-Seq DDX39A-CD97 DDX39A chr19 14520546 - CD97 chr19 14519030 + Exonic hg19 LUSC TCGA-22-4607 13 113 Out-of-frame Intra-chr p13.12 35448 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF28-BTF3 ARHGEF28 chr5 72980709 + BTF3 chr5 72798313 + Exonic hg19 LUSC TCGA-22-4607 10 44 Out-of-frame Intra-chr q13.2 q13.2 35449 ChimerSeq STARFusion TCGA_RNA-Seq SPDYA-BRE SPDYA chr2 29006844 + BRE chr2 28460069 + Exonic hg19 LUSC TCGA-22-4607 5 30 5'UTR-CDS Intra-chr p23.2 Seq+ 35450 ChimerSeq STARFusion TCGA_RNA-Seq KEAP1-IGKC KEAP1 chr19 10600439 - IGKC chr2 89160434 - Exonic hg19 LUSC TCGA-22-4607 11 3 Out-of-frame Inter-chr p13.2 Oncogene p11.2 35451 ChimerSeq STARFusion TCGA_RNA-Seq SPDYA-BRE SPDYA chr2 29011675 + BRE chr2 28456010 + Exonic hg19 LUSC TCGA-22-4607 2 30 Out-of-frame Intra-chr p23.2 Seq+ 35452 ChimerSeq STARFusion TCGA_RNA-Seq SPDYA-BRE SPDYA chr2 29011675 + BRE chr2 28460069 + Exonic hg19 LUSC TCGA-22-4607 2 28 5'UTR-CDS Intra-chr p23.2 Seq+ 35453 ChimerSeq STARFusion TCGA_RNA-Seq CCNL2-IGH@ CCNL2 chr1 1323165 - IGH@ chr14 106209410 - Exonic hg19 LUSC TCGA-22-4604 24 1 Out-of-frame Inter-chr p36.33 32.33 35454 ChimerSeq STARFusion TCGA_RNA-Seq CCNL2-IGHG1 CCNL2 chr1 1323165 - IGHG1 chr14 106209410 - Exonic hg19 LUSC TCGA-22-4604 24 1 Out-of-frame Inter-chr p36.33 q32.33 35455 ChimerSeq STARFusion TCGA_RNA-Seq CCNL2-IGH@ CCNL2 chr1 1323165 - IGH@ chr14 106237745 - Exonic hg19 LUSC TCGA-22-4604 17 1 Out-of-frame Inter-chr p36.33 32.33 35456 ChimerSeq STARFusion TCGA_RNA-Seq CCNL2-IGH@ CCNL2 chr1 1323165 - IGH@ chr14 106111129 - Exonic hg19 LUSC TCGA-22-4604 16 1 Out-of-frame Inter-chr p36.33 32.33 35457 ChimerSeq STARFusion TCGA_RNA-Seq CCNL2-IGHG1 CCNL2 chr1 1323165 - IGHG1 chr14 106237745 - Exonic hg19 LUSC TCGA-22-4604 16 1 Out-of-frame Inter-chr p36.33 q32.33 35458 ChimerSeq STARFusion TCGA_RNA-Seq CCNL2-IGH@ CCNL2 chr1 1323165 - IGH@ chr14 106136184 - Exonic hg19 LUSC TCGA-22-4604 15 1 Out-of-frame Inter-chr p36.33 32.33 35459 ChimerSeq STARFusion TCGA_RNA-Seq TRAP1-IGKC TRAP1 chr16 3711994 - IGKC chr2 89157198 - Exonic hg19 LUSC TCGA-22-4604 14 1 Out-of-frame Inter-chr p13.3 p11.2 35460 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-AHDC1 WASF2 chr1 27816497 - AHDC1 chr1 27879696 - Exonic hg19 LUSC TCGA-22-4604 2 34 5'UTR-5'UTR Intra-chr p36.11 p35.3 Transcription factor Seq+ 35461 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LUSC TCGA-22-4604 6 9 In-Frame Intra-chr p13.3 p13.3 35462 ChimerSeq STARFusion TCGA_RNA-Seq NFX1-TMEM8B NFX1 chr9 33354890 + TMEM8B chr9 35845972 + Exonic hg19 LUSC TCGA-22-4604 4 8 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 35463 ChimerSeq STARFusion TCGA_RNA-Seq RABGGTB-FOXJ3 RABGGTB chr1 76251959 + FOXJ3 chr1 42647695 - Exonic hg19 LUSC TCGA-22-4601 6 10 Out-of-frame Intra-chr p31.1 p34.2 Transcription factor Seq+ 35464 ChimerSeq STARFusion TCGA_RNA-Seq ACADM-FOXJ3 ACADM chr1 76251959 + FOXJ3 chr1 42647695 - Exonic hg19 LUSC TCGA-22-4601 6 6 3'UTR-CDS Intra-chr p31.1 p34.2 Transcription factor Seq+ 35465 ChimerSeq STARFusion TCGA_RNA-Seq MACF1-NDUFS5 MACF1 chr1 39571389 + NDUFS5 chr1 39494395 + Exonic hg19 LUSC TCGA-22-4601 4 13 CDS-5'UTR Intra-chr p34.3 p34.3 35466 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF18-TECR ARHGEF18 chr19 7535201 + TECR chr19 14673337 + Exonic hg19 LUSC TCGA-56-7221 4 7 3'UTR-CDS Intra-chr p13.2 p13.12 Seq+ 35467 ChimerSeq STARFusion TCGA_RNA-Seq CCAT1-CASC8 CCAT1 chr8 128231055 - CASC8 chr8 128302305 - Exonic hg19 LUSC TCGA-77-8128 69 376 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 35468 ChimerSeq STARFusion TCGA_RNA-Seq CCAT1-CASC8 CCAT1 chr8 128231055 - CASC8 chr8 128331096 - Exonic hg19 LUSC TCGA-77-8128 11 375 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 35469 ChimerSeq STARFusion TCGA_RNA-Seq RNF170-IGKC RNF170 chr8 42708738 - IGKC chr2 89161074 - Exonic hg19 LUSC TCGA-18-3412 10 0 Out-of-frame Inter-chr p11.21 p11.2 35470 ChimerSeq STARFusion TCGA_RNA-Seq RNF170-IGKJ2 RNF170 chr8 42708738 - IGKJ2 chr2 89161074 - Exonic hg19 LUSC TCGA-18-3412 10 0 Out-of-frame Inter-chr p11.21 p11.2 35471 ChimerSeq STARFusion TCGA_RNA-Seq RPL18-EEF1A1 RPL18 chr19 49119432 - EEF1A1 chr6 74227934 - Exonic hg19 LUSC TCGA-18-3412 3 6 Out-of-frame Inter-chr q13.33 q13 Tumor suppressor gene 35472 ChimerSeq STARFusion TCGA_RNA-Seq NUMA1-ABHD12 NUMA1 chr11 71780888 - ABHD12 chr20 25304066 - Exonic hg19 LUSC TCGA-18-3410 8 72 5'UTR-CDS Inter-chr q13.4 Oncogene p11.21 Seq+ 35473 ChimerSeq STARFusion TCGA_RNA-Seq ICAM1-ERGIC2 ICAM1 chr19 10397222 + ERGIC2 chr12 29491577 - Exonic hg19 LUSC TCGA-18-3410 15 0 Out-of-frame Inter-chr p13.2 p11.22 35474 ChimerSeq STARFusion TCGA_RNA-Seq PDCL3-IGHG3 PDCL3 chr2 101179339 + IGHG3 chr14 106330467 - Exonic hg19 LUSC TCGA-85-6561 30 0 Out-of-frame Inter-chr q11.2 35475 ChimerSeq STARFusion TCGA_RNA-Seq PDCL3-IGHJ4 PDCL3 chr2 101179339 + IGHJ4 chr14 106330467 - Exonic hg19 LUSC TCGA-85-6561 30 0 Out-of-frame Inter-chr q11.2 35476 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525073 - IGHG1 chr14 106209411 - Exonic hg19 LUSC TCGA-85-6561 18 1 Out-of-frame Inter-chr q34 Oncogene q32.33 35477 ChimerSeq STARFusion TCGA_RNA-Seq NBAS-DDX1 NBAS chr2 15467874 - DDX1 chr2 15735269 + Exonic hg19 LUSC TCGA-85-6561 10 32 In-Frame Intra-chr p24.3 p24.3 Seq+ 35478 ChimerSeq STARFusion TCGA_RNA-Seq DSP-IGKJ4 DSP chr6 7569562 + IGKJ4 chr2 89160429 - Exonic hg19 LUSC TCGA-85-6561 14 1 Out-of-frame Inter-chr p24.3 Tumor suppressor gene p11.2 35479 ChimerSeq STARFusion TCGA_RNA-Seq ZZEF1-IGHG3 ZZEF1 chr17 3990768 - IGHG3 chr14 106331652 - Exonic hg19 LUSC TCGA-85-6561 12 1 Out-of-frame Inter-chr p13.2 35480 ChimerSeq STARFusion TCGA_RNA-Seq LMNB2-IGHGP LMNB2 chr19 2434060 - IGHGP chr14 106136184 - Exonic hg19 LUSC TCGA-85-6561 10 3 Out-of-frame Inter-chr p13.3 35481 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-IGHG1 GNB1 chr1 1718063 - IGHG1 chr14 106209411 - Exonic hg19 LUSC TCGA-85-6561 10 2 Out-of-frame Inter-chr p36.33 q32.33 35482 ChimerSeq STARFusion TCGA_RNA-Seq TARS2-VPS45 TARS2 chr1 150464965 + VPS45 chr1 150116887 + Exonic hg19 LUSC TCGA-85-6560 25 129 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 35483 ChimerSeq STARFusion TCGA_RNA-Seq TARS2-VPS45 TARS2 chr1 150469104 + VPS45 chr1 150116887 + Exonic hg19 LUSC TCGA-85-6560 7 129 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 35484 ChimerSeq STARFusion TCGA_RNA-Seq ABHD12B-RNASE1 ABHD12B chr14 51348344 + RNASE1 chr14 21271163 - Exonic hg19 LUSC TCGA-85-6560 27 43 CDS-5'UTR Intra-chr q22.1 q11.2 Seq+ 35485 ChimerSeq STARFusion TCGA_RNA-Seq ABHD12B-RNASE1 ABHD12B chr14 51348344 + RNASE1 chr14 21271029 - Exonic hg19 LUSC TCGA-85-6560 7 38 CDS-5'UTR Intra-chr q22.1 q11.2 Seq+ 35486 ChimerSeq STARFusion TCGA_RNA-Seq GTF2H1-PSMA1 GTF2H1 chr11 18361204 + PSMA1 chr11 14526794 - Exonic hg19 LUSC TCGA-85-6560 6 26 Out-of-frame Intra-chr p15.1 p15.2 Seq+ 35487 ChimerSeq STARFusion TCGA_RNA-Seq GTF2H1-PSMA1 GTF2H1 chr11 18361204 + PSMA1 chr11 14526794 - Exonic hg19 LUSC TCGA-85-6560 5 20 Out-of-frame Intra-chr p15.1 p15.2 Seq+ 35488 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD1-PXDNL PCMTD1 chr8 52811490 - PXDNL chr8 52567320 - Exonic hg19 LUSC TCGA-85-6560 2 10 5'UTR-CDS Intra-chr q11.23 q11.23 Seq+ 35489 ChimerSeq STARFusion TCGA_RNA-Seq PAQR8-MAPK14 PAQR8 chr6 52227047 + MAPK14 chr6 36070348 + Exonic hg19 LUSC TCGA-18-3411 4 6 5'UTR-CDS Intra-chr p12.2 p21.31 Seq+ 35490 ChimerSeq STARFusion TCGA_RNA-Seq PLS1-TFDP2 PLS1 chr3 142315351 + TFDP2 chr3 141682805 - Exonic hg19 LUSC TCGA-18-3416 5 38 5'UTR-CDS Intra-chr q23 q23 Transcription factor Seq+ 35491 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-KDM5D IGH@ chr14 106552287 - KDM5D chrY 21906393 - Exonic hg19 LUSC TCGA-18-3416 14 1 Out-of-frame Inter-chr 32.33 q11.223 35492 ChimerSeq STARFusion TCGA_RNA-Seq MYO9B-IGL@ MYO9B chr19 17311470 + IGL@ chr22 23241801 + Exonic hg19 LUSC TCGA-18-3416 13 1 Out-of-frame Inter-chr p13.11 q11.22 35493 ChimerSeq STARFusion TCGA_RNA-Seq MYO9B-IGLC2 MYO9B chr19 17311470 + IGLC2 chr22 23241801 + Exonic hg19 LUSC TCGA-18-3416 13 1 Out-of-frame Inter-chr p13.11 q11.22 35494 ChimerSeq STARFusion TCGA_RNA-Seq MYO9B-IGLJ2 MYO9B chr19 17311470 + IGLJ2 chr22 23241801 + Exonic hg19 LUSC TCGA-18-3416 13 1 Out-of-frame Inter-chr p13.11 q11.22 35495 ChimerSeq STARFusion TCGA_RNA-Seq MYO9B-IGL@ MYO9B chr19 17311470 + IGL@ chr22 23247171 + Exonic hg19 LUSC TCGA-18-3416 8 1 Out-of-frame Inter-chr p13.11 q11.22 35496 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CELSR2 IGH@ chr14 106877618 - CELSR2 chr1 109792941 + Exonic hg19 LUSC TCGA-18-3416 6 1 Out-of-frame Inter-chr 32.33 p13.3 35497 ChimerSeq STARFusion TCGA_RNA-Seq PKN3-IGL@ PKN3 chr9 131483200 + IGL@ chr22 23029555 + Exonic hg19 LUSC TCGA-18-3416 6 1 Out-of-frame Inter-chr q34.11 AGC:PKN q11.22 35498 ChimerSeq STARFusion TCGA_RNA-Seq RGS12-IGH@ RGS12 chr4 3317998 + IGH@ chr14 106330471 - Exonic hg19 LUSC TCGA-18-3416 5 1 Out-of-frame Inter-chr p16.3 32.33 35499 ChimerSeq STARFusion TCGA_RNA-Seq FAM104A-CDC42EP4 FAM104A chr17 71223304 - CDC42EP4 chr17 71282751 - Exonic hg19 LUSC TCGA-98-A53A 7 81 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 35500 ChimerSeq STARFusion TCGA_RNA-Seq LUC7L-AXIN1 LUC7L chr16 277241 - AXIN1 chr16 364683 - Exonic hg19 LUSC TCGA-98-A53A 13 55 Out-of-frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Seq+ 35501 ChimerSeq STARFusion TCGA_RNA-Seq TMEM104-PCYT2 TMEM104 chr17 72781742 + PCYT2 chr17 79867478 - Exonic hg19 LUSC TCGA-98-A53A 11 59 In-Frame Intra-chr q25.1 q25.3 Seq+ 35502 ChimerSeq STARFusion TCGA_RNA-Seq FAM104A-CDC42EP4 FAM104A chr17 71228225 - CDC42EP4 chr17 71282751 - Exonic hg19 LUSC TCGA-98-A53A 5 80 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 35503 ChimerSeq STARFusion TCGA_RNA-Seq TAF12-TPRG1 TAF12 chr1 28944465 - TPRG1 chr3 189028175 + Exonic hg19 LUSC TCGA-98-A53A 13 35 Out-of-frame Inter-chr p35.3 q28 Seq+ 35504 ChimerSeq STARFusion TCGA_RNA-Seq TPD52L1-RNF217 TPD52L1 chr6 125475116 + RNF217 chr6 125366357 + Exonic hg19 LUSC TCGA-98-A53A 6 56 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 35505 ChimerSeq STARFusion TCGA_RNA-Seq TPD52L1-RNF217 TPD52L1 chr6 125475116 + RNF217 chr6 125379088 + Exonic hg19 LUSC TCGA-98-A53A 2 56 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 35506 ChimerSeq STARFusion TCGA_RNA-Seq NAPG-PIEZO2 NAPG chr18 10534493 + PIEZO2 chr18 10682289 - Exonic hg19 LUSC TCGA-98-A53A 7 25 In-Frame Intra-chr p11.22 p11.21 Seq+ 35507 ChimerSeq STARFusion TCGA_RNA-Seq TXNRD1-LAMTOR3 TXNRD1 chr12 104707095 + LAMTOR3 chr4 100803224 - Exonic hg19 LUSC TCGA-98-A53A 4 23 In-Frame Inter-chr q23.3 q23 Seq+ 35508 ChimerSeq STARFusion TCGA_RNA-Seq SPPL2A-TNFAIP8L3 SPPL2A chr15 51028298 - TNFAIP8L3 chr15 51350640 - Exonic hg19 LUSC TCGA-98-A53A 3 25 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 35509 ChimerSeq STARFusion TCGA_RNA-Seq GRB2-CASKIN2 GRB2 chr17 73389632 - CASKIN2 chr17 73504366 - Exonic hg19 LUSC TCGA-98-A53A 5 10 Out-of-frame Intra-chr q25.1 q25.1 35510 ChimerSeq STARFusion TCGA_RNA-Seq USP37-DIRC3 USP37 chr2 219394679 - DIRC3 chr2 218298839 - Exonic hg19 LUSC TCGA-98-A53A 3 17 CDS-3'UTR Intra-chr q35 q35 Seq+ 35511 ChimerSeq STARFusion TCGA_RNA-Seq CAMK2D-ANK2 CAMK2D chr4 114430794 - ANK2 chr4 114302613 + Exonic hg19 LUSC TCGA-98-A53A 4 9 In-Frame Intra-chr q26 q25 Seq+ 35512 ChimerSeq STARFusion TCGA_RNA-Seq KRT17-HAP1 KRT17 chr17 39776788 - HAP1 chr17 39889050 - Exonic hg19 LUSC TCGA-98-A53A 2 4 In-Frame Intra-chr q21.2 q21.2 35513 ChimerSeq STARFusion TCGA_RNA-Seq DCAF8-NME7 DCAF8 chr1 160231075 - NME7 chr1 169279318 - Exonic hg19 LUSC TCGA-18-3417 17 95 5'UTR-CDS Intra-chr q23.2 q24.2 Seq+ 35514 ChimerSeq STARFusion TCGA_RNA-Seq DCAF8-NME7 DCAF8 chr1 160232239 - NME7 chr1 169279318 - Exonic hg19 LUSC TCGA-18-3417 5 88 5'UTR-CDS Intra-chr q23.2 q24.2 Seq+ 35515 ChimerSeq STARFusion TCGA_RNA-Seq DCAF8-NME7 DCAF8 chr1 160232066 - NME7 chr1 169279318 - Exonic hg19 LUSC TCGA-18-3417 4 88 3'UTR-CDS Intra-chr q23.2 q24.2 Seq+ 35516 ChimerSeq STARFusion TCGA_RNA-Seq DCAF8-NME7 DCAF8 chr1 160231907 - NME7 chr1 169279318 - Exonic hg19 LUSC TCGA-18-3417 4 88 3'UTR-CDS Intra-chr q23.2 q24.2 Seq+ 35517 ChimerSeq STARFusion TCGA_RNA-Seq NCOA3-EYA2 NCOA3 chr20 46271128 + EYA2 chr20 45700824 + Exonic hg19 LUSC TCGA-37-4133 2 11 Out-of-frame Intra-chr q13.12 Transcription factor q13.12 Seq+ 35518 ChimerSeq STARFusion TCGA_RNA-Seq PGD-IGL@ PGD chr1 10480049 + IGL@ chr22 23241803 + Exonic hg19 LUSC TCGA-37-4132 36 1 Out-of-frame Inter-chr p36.22 q11.22 35519 ChimerSeq STARFusion TCGA_RNA-Seq SBF2-PRMT3 SBF2 chr11 10315562 - PRMT3 chr11 20473676 + Exonic hg19 LUSC TCGA-37-4132 14 25 Out-of-frame Intra-chr p15.4 p15.1 Transcription factor Seq+ 35520 ChimerSeq STARFusion TCGA_RNA-Seq CHP1-IGH@ CHP1 chr15 41523545 + IGH@ chr14 106209407 - Exonic hg19 LUSC TCGA-37-4132 10 1 Out-of-frame Inter-chr q15.1 32.33 35521 ChimerSeq STARFusion TCGA_RNA-Seq CHP1-IGHG1 CHP1 chr15 41523545 + IGHG1 chr14 106209407 - Exonic hg19 LUSC TCGA-37-4132 10 1 Out-of-frame Inter-chr q15.1 q32.33 35522 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-AKR1C1 IGH@ chr14 107136833 - AKR1C1 chr10 5005700 + Exonic hg19 LUSC TCGA-37-4132 5 6 Out-of-frame Inter-chr 32.33 p15.1 35523 ChimerSeq STARFusion TCGA_RNA-Seq RSL24D1-RAB27A RSL24D1 chr15 55489008 - RAB27A chr15 55497903 - Exonic hg19 LUSC TCGA-37-4132 5 6 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 35524 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-PRKAR2B IGL@ chr22 23154765 + PRKAR2B chr7 106786809 + Exonic hg19 LUSC TCGA-37-4130 166 0 Out-of-frame Inter-chr q11.22 35525 ChimerSeq STARFusion TCGA_RNA-Seq UBAP2L-EEFSEC UBAP2L chr1 154214041 + EEFSEC chr3 128126912 + Exonic hg19 LUSC TCGA-37-4130 25 91 Out-of-frame Inter-chr q21.3 q21.3 Seq+ 35526 ChimerSeq STARFusion TCGA_RNA-Seq FN1-PECR FN1 chr2 216242898 - PECR chr2 216931241 - Exonic hg19 LUSC TCGA-37-4130 18 73 In-Frame Intra-chr q35 Oncogene q35 Seq+ 35527 ChimerSeq STARFusion TCGA_RNA-Seq PDZD8-KIAA0101 PDZD8 chr10 119133867 - KIAA0101 chr15 64673237 - Exonic hg19 LUSC TCGA-37-4130 6 17 Out-of-frame Inter-chr q26.11 35528 ChimerSeq STARFusion TCGA_RNA-Seq GINS1-SYNDIG1 GINS1 chr20 25426675 + SYNDIG1 chr20 24645982 + Exonic hg19 LUSC TCGA-37-4130 5 13 3'UTR-CDS Intra-chr p11.21 p11.21 Seq+ 35529 ChimerSeq STARFusion TCGA_RNA-Seq MRPL35-CTNNA2 MRPL35 chr2 86434450 + CTNNA2 chr2 80772107 + Exonic hg19 LUSC TCGA-18-3414 35 271 In-Frame Intra-chr p11.2 p12 Tumor suppressor gene Seq+ 35530 ChimerSeq STARFusion TCGA_RNA-Seq KITLG-TNNC1 KITLG chr12 88974041 - TNNC1 chr3 52486268 - Exonic hg19 LUSC TCGA-18-3414 2 6 Out-of-frame Inter-chr q21.32 p21.1 Seq+ 35531 ChimerSeq STARFusion TCGA_RNA-Seq KITLG-TNNC1 KITLG chr12 88974041 - TNNC1 chr3 52486529 - Exonic hg19 LUSC TCGA-18-3414 2 6 In-Frame Inter-chr q21.32 p21.1 Seq+ 35532 ChimerSeq STARFusion TCGA_RNA-Seq ADD1-FAM193A ADD1 chr4 2845751 + FAM193A chr4 2733502 + Exonic hg19 LUSC TCGA-37-4135 10 93 5'UTR-5'UTR Intra-chr p16.3 p16.3 Seq+ 35533 ChimerSeq STARFusion TCGA_RNA-Seq MRPL48-GDPD5 MRPL48 chr11 73519395 + GDPD5 chr11 75155540 - Exonic hg19 LUSC TCGA-37-4135 9 52 Out-of-frame Intra-chr q13.4 q13.5 Seq+ 35534 ChimerSeq STARFusion TCGA_RNA-Seq SEMA3F-RBM6 SEMA3F chr3 50197167 + RBM6 chr3 50085678 + Exonic hg19 LUSC TCGA-37-4135 5 26 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene Seq+ 35535 ChimerSeq STARFusion TCGA_RNA-Seq NCK1-IL20RB NCK1 chr3 136581161 + IL20RB chr3 136699308 + Exonic hg19 LUSC TCGA-37-4135 2 30 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 35536 ChimerSeq STARFusion TCGA_RNA-Seq NCK1-IL20RB NCK1 chr3 136581161 + IL20RB chr3 136714256 + Exonic hg19 LUSC TCGA-37-4135 2 30 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 35537 ChimerSeq STARFusion TCGA_RNA-Seq ATG10-SHFM1P1 ATG10 chr5 81354421 + SHFM1P1 chr5 81188505 + Exonic hg19 LUSC TCGA-37-4135 7 6 Out-of-frame Intra-chr q14.1 35538 ChimerSeq STARFusion TCGA_RNA-Seq CP-MRAS CP chr3 148939434 - MRAS chr3 138116166 + Exonic hg19 LUSC TCGA-37-4135 2 24 Out-of-frame Intra-chr q25.1 q22.3 Seq+ 35539 ChimerSeq STARFusion TCGA_RNA-Seq PIK3C3-TRPC6 PIK3C3 chr18 39573305 + TRPC6 chr11 101375529 - Exonic hg19 LUSC TCGA-37-4135 5 11 Out-of-frame Inter-chr q12.3 q22.1 Seq+ 35540 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L2-ZC3H13 NFE2L2 chr2 178129260 - ZC3H13 chr13 46554139 - Exonic hg19 LUSC TCGA-18-3415 172 607 Out-of-frame Inter-chr q31.2 Oncogene Transcription factor q14.13 Seq+ 35541 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L2-ZC3H13 NFE2L2 chr2 178128131 - ZC3H13 chr13 46554139 - Exonic hg19 LUSC TCGA-18-3415 118 607 5'UTR-CDS Inter-chr q31.2 Oncogene Transcription factor q14.13 Seq+ 35542 ChimerSeq STARFusion TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105614953 - OBFC1 chr10 105670380 - Exonic hg19 LUSC TCGA-18-3415 20 109 Out-of-frame Intra-chr q24.33 Seq+ 35543 ChimerSeq STARFusion TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105614953 - OBFC1 chr10 105664914 - Exonic hg19 LUSC TCGA-18-3415 2 108 Out-of-frame Intra-chr q24.33 Seq+ 35544 ChimerSeq STARFusion TCGA_RNA-Seq C6orf62-FAM65B C6orf62 chr6 24716376 - FAM65B chr6 24818853 - Exonic hg19 LUSC TCGA-18-3415 12 42 In-Frame Intra-chr p22.3 Seq+ 35545 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-RHBDD2 IGL@ chr22 23055682 + RHBDD2 chr7 75512954 + Exonic hg19 LUSC TCGA-18-3415 15 1 Out-of-frame Inter-chr q11.22 q11.23 35546 ChimerSeq STARFusion TCGA_RNA-Seq SLAMF7-IGH@ SLAMF7 chr1 160723964 + IGH@ chr14 106330466 - Exonic hg19 LUSC TCGA-18-3415 14 1 Out-of-frame Inter-chr q23.3 32.33 35547 ChimerSeq STARFusion TCGA_RNA-Seq LAMTOR4-AP4M1 LAMTOR4 chr7 99747202 + AP4M1 chr7 99699331 + Exonic hg19 LUSC TCGA-18-3415 4 17 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 35548 ChimerSeq STARFusion TCGA_RNA-Seq SENP5-PAK2 SENP5 chr3 196613565 + PAK2 chr3 196554067 + Exonic hg19 LUSC TCGA-18-3415 2 19 Out-of-frame Intra-chr q29 q29 STE:STE20 Seq+ 35549 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H13-NFE2L2 ZC3H13 chr13 46553948 - NFE2L2 chr2 178148532 - Exonic hg19 LUSC TCGA-18-3415 2 7 CDS-5'UTR Inter-chr q14.13 q31.2 Oncogene Transcription factor Seq+ 35550 ChimerSeq STARFusion TCGA_RNA-Seq VCL-ADK VCL chr10 75834661 + ADK chr10 76285014 + Exonic hg19 LUSC TCGA-77-A5G3 11 113 In-Frame Intra-chr q22.2 q22.2 Seq+ 35551 ChimerSeq STARFusion TCGA_RNA-Seq VCL-ADK VCL chr10 75834661 + ADK chr10 76349040 + Exonic hg19 LUSC TCGA-77-A5G3 2 112 In-Frame Intra-chr q22.2 q22.2 Seq+ 35552 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D4-KLF12 TBC1D4 chr13 76055406 - KLF12 chr13 74387424 - Exonic hg19 LUSC TCGA-77-A5G3 4 3 Out-of-frame Intra-chr q22.2 q22.1 Transcription factor Seq+ 35553 ChimerSeq STARFusion TCGA_RNA-Seq TMSB10-HAP1 TMSB10 chr2 85133236 + HAP1 chr17 39877732 - Exonic hg19 LUSC TCGA-77-A5G3 3 4 Out-of-frame Inter-chr p11.2 q21.2 35554 ChimerSeq STARFusion TCGA_RNA-Seq SARNP-VAMP8 SARNP chr12 56182859 - VAMP8 chr2 85806132 + Exonic hg19 LUSC TCGA-NC-A5HQ 30 109 In-Frame Inter-chr q13.2 p11.2 Seq+ 35555 ChimerSeq STARFusion TCGA_RNA-Seq CCAT1-CASC8 CCAT1 chr8 128231055 - CASC8 chr8 128433208 - Exonic hg19 LUSC TCGA-NC-A5HQ 4 24 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 35556 ChimerSeq STARFusion TCGA_RNA-Seq PARP8-CRYL1 PARP8 chr5 49963959 + CRYL1 chr13 20987526 - Exonic hg19 LUSC TCGA-56-7823 20 134 Out-of-frame Inter-chr q11.1 q12.11 Seq+ 35557 ChimerSeq STARFusion TCGA_RNA-Seq PARP8-CRYL1 PARP8 chr5 49963959 + CRYL1 chr13 20978880 - Exonic hg19 LUSC TCGA-56-7823 3 119 Out-of-frame Inter-chr q11.1 q12.11 Seq+ 35558 ChimerSeq STARFusion TCGA_RNA-Seq ATP11B-FXR1 ATP11B chr3 182511574 + FXR1 chr3 180685839 + Exonic hg19 LUSC TCGA-56-7823 10 50 Out-of-frame Intra-chr q26.33 Oncogene q26.33 Seq+ 35559 ChimerSeq STARFusion TCGA_RNA-Seq ATP11A-F7 ATP11A chr13 113439571 + F7 chr13 113768161 + Exonic hg19 LUSC TCGA-56-7823 5 56 Out-of-frame Intra-chr q34 q34 Seq+ 35560 ChimerSeq STARFusion TCGA_RNA-Seq ATP11A-F7 ATP11A chr13 113439571 + F7 chr13 113765004 + Exonic hg19 LUSC TCGA-56-7823 2 56 Out-of-frame Intra-chr q34 q34 Seq+ 35561 ChimerSeq STARFusion TCGA_RNA-Seq ATP11A-F7 ATP11A chr13 113439571 + F7 chr13 113768066 + Exonic hg19 LUSC TCGA-56-7823 2 56 In-Frame Intra-chr q34 q34 Seq+ 35562 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB38-ACPL2 ZBTB38 chr3 141122873 + ACPL2 chr3 140997184 + Exonic hg19 LUSC TCGA-56-7823 3 42 5'UTR-CDS Intra-chr q23 Transcription factor Seq+ 35563 ChimerSeq STARFusion TCGA_RNA-Seq COL4A2-CDC16 COL4A2 chr13 111009899 + CDC16 chr13 115028354 + Exonic hg19 LUSC TCGA-56-7823 2 6 Out-of-frame Intra-chr q34 q34 Seq+ 35564 ChimerSeq STARFusion TCGA_RNA-Seq COL4A2-CDC16 COL4A2 chr13 111009899 + CDC16 chr13 115022553 + Exonic hg19 LUSC TCGA-56-7823 2 6 Out-of-frame Intra-chr q34 q34 Seq+ 35565 ChimerSeq STARFusion TCGA_RNA-Seq NCAPG2-ESYT2 NCAPG2 chr7 158485534 - ESYT2 chr7 158531812 - Exonic hg19 LUSC TCGA-56-7823 2 3 Out-of-frame Intra-chr q36.3 q36.3 35566 ChimerSeq STARFusion TCGA_RNA-Seq RBMS1-ITGB6 RBMS1 chr2 161174680 - ITGB6 chr2 160994710 - Exonic hg19 LUSC TCGA-56-7822 6 12 Out-of-frame Intra-chr q24.2 q24.2 35567 ChimerSeq STARFusion TCGA_RNA-Seq DST-AKAP6 DST chr6 56464867 - AKAP6 chr14 33147517 + Exonic hg19 LUSC TCGA-56-7822 4 8 In-Frame Inter-chr p12.1 Oncogene q12 Seq+ 35568 ChimerSeq STARFusion TCGA_RNA-Seq ERC1-RAD52 ERC1 chr12 1517413 + RAD52 chr12 1042242 - Exonic hg19 LUSC TCGA-56-7822 3 7 5'UTR-5'UTR Intra-chr p13.33 35569 ChimerSeq STARFusion TCGA_RNA-Seq BMP2K-CDS1 BMP2K chr4 79697875 + CDS1 chr4 85552972 + Exonic hg19 LUSC TCGA-NC-A5HT 6 5 In-Frame Intra-chr q21.21 q21.23 Tumor suppressor gene Seq+ 35570 ChimerSeq STARFusion TCGA_RNA-Seq AHNAK-NXF1 AHNAK chr11 62301133 - NXF1 chr11 62560173 - Exonic hg19 LUSC TCGA-NC-A5HH 18 77 In-Frame Intra-chr q12.3 Tumor suppressor gene q12.3 Seq+ 35571 ChimerSeq STARFusion TCGA_RNA-Seq AHNAK-NXF1 AHNAK chr11 62302475 - NXF1 chr11 62560173 - Exonic hg19 LUSC TCGA-NC-A5HH 9 74 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q12.3 Seq+ 35572 ChimerSeq STARFusion TCGA_RNA-Seq MED23-RNF217 MED23 chr6 131908849 - RNF217 chr6 125366357 + Exonic hg19 LUSC TCGA-NC-A5HH 6 11 In-Frame Intra-chr q23.2 q22.31 Seq+ 35573 ChimerSeq STARFusion TCGA_RNA-Seq FLNA-MTCP1 FLNA chrX 153602874 - MTCP1 chrX 154292308 - Exonic hg19 LUSC TCGA-NC-A5HH 2 24 5'UTR-3'UTR Intra-chr q28 Tumor suppressor gene q28 Seq+ 35574 ChimerSeq STARFusion TCGA_RNA-Seq FLNA-MTCP1 FLNA chrX 153595765 - MTCP1 chrX 154292308 - Exonic hg19 LUSC TCGA-NC-A5HH 2 24 CDS-3'UTR Intra-chr q28 Tumor suppressor gene q28 Seq+ 35575 ChimerSeq STARFusion TCGA_RNA-Seq FLNA-CMC4 FLNA chrX 153602874 - CMC4 chrX 154292308 - Exonic hg19 LUSC TCGA-NC-A5HH 2 16 Out-of-frame Intra-chr q28 Tumor suppressor gene q28 Seq+ 35576 ChimerSeq STARFusion TCGA_RNA-Seq FLNA-CMC4 FLNA chrX 153595765 - CMC4 chrX 154292308 - Exonic hg19 LUSC TCGA-NC-A5HH 2 15 Out-of-frame Intra-chr q28 Tumor suppressor gene q28 Seq+ 35577 ChimerSeq STARFusion TCGA_RNA-Seq SPATA2L-FANCA SPATA2L chr16 89764603 - FANCA chr16 89811479 - Exonic hg19 LUSC TCGA-NC-A5HH 2 13 Out-of-frame Intra-chr q24.3 q24.3 Oncogene Seq+ 35578 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHGP STK25 chr2 242434915 - IGHGP chr14 106136184 - Exonic hg19 LUSC TCGA-NC-A5HI 24 1 Out-of-frame Inter-chr q37.3 35579 ChimerSeq STARFusion TCGA_RNA-Seq CDC42BPB-ZFYVE1 CDC42BPB chr14 103452824 - ZFYVE1 chr14 73465023 - Exonic hg19 LUSC TCGA-NC-A5HI 9 38 In-Frame Intra-chr q32.32 q24.2 Seq+ 35580 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHGP STK25 chr2 242434915 - IGHGP chr14 106209410 - Exonic hg19 LUSC TCGA-NC-A5HI 11 1 Out-of-frame Inter-chr q37.3 35581 ChimerSeq STARFusion TCGA_RNA-Seq FCF1-FOXN3 FCF1 chr14 75180255 + FOXN3 chr14 89817152 - Exonic hg19 LUSC TCGA-NC-A5HI 3 5 Out-of-frame Intra-chr q24.3 q32.11 Transcription factor Seq+ 35582 ChimerSeq STARFusion TCGA_RNA-Seq C6orf132-TRERF1 C6orf132 chr6 42069590 - TRERF1 chr6 42200630 - Exonic hg19 LUSC TCGA-NC-A5HJ 14 227 3'UTR-CDS Intra-chr p21.1 p21.1 Transcription factor Seq+ 35583 ChimerSeq STARFusion TCGA_RNA-Seq C6orf132-TRERF1 C6orf132 chr6 42071568 - TRERF1 chr6 42200630 - Exonic hg19 LUSC TCGA-NC-A5HJ 12 225 Out-of-frame Intra-chr p21.1 p21.1 Transcription factor Seq+ 35584 ChimerSeq STARFusion TCGA_RNA-Seq CAPN13-GALNT14 CAPN13 chr2 30980912 - GALNT14 chr2 31147689 - Exonic hg19 LUSC TCGA-NC-A5HJ 37 105 In-Frame Intra-chr p23.1 p23.1 Seq+ 35585 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP15-KYNU ARHGAP15 chr2 143887035 + KYNU chr2 143642918 + Exonic hg19 LUSC TCGA-NC-A5HJ 9 11 5'UTR-5'UTR Intra-chr q22.2 q22.2 Seq+ 35586 ChimerSeq STARFusion TCGA_RNA-Seq YTHDF2-RAB42 YTHDF2 chr1 29070498 + RAB42 chr1 28920206 + Exonic hg19 LUSC TCGA-NC-A5HJ 7 13 Out-of-frame Intra-chr p35.3 p35.3 Seq+ 35587 ChimerSeq STARFusion TCGA_RNA-Seq SLC1A1-SMARCA2 SLC1A1 chr9 4490770 + SMARCA2 chr9 2096657 + Exonic hg19 LUSC TCGA-NC-A5HJ 2 15 Out-of-frame Intra-chr p24.2 p24.3 Tumor suppressor gene Seq+ 35588 ChimerSeq STARFusion TCGA_RNA-Seq GON4L-MEX3A GON4L chr1 155823067 - MEX3A chr1 156047473 - Exonic hg19 LUSC TCGA-NC-A5HJ 2 10 In-Frame Intra-chr q22 q22 Seq+ 35589 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57739004 + VMP1 chr17 57915656 + Exonic hg19 LUSC TCGA-NC-A5HK 203 790 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 35590 ChimerSeq STARFusion TCGA_RNA-Seq EEF1G-AHNAK EEF1G chr11 62334278 - AHNAK chr11 62201363 - Exonic hg19 LUSC TCGA-NC-A5HK 44 217 Out-of-frame Intra-chr q12.3 q12.3 Tumor suppressor gene Seq+ 35591 ChimerSeq STARFusion TCGA_RNA-Seq MIR3654-AHNAK MIR3654 chr11 62334278 - AHNAK chr11 62201363 - Exonic hg19 LUSC TCGA-NC-A5HK 44 217 5'UTR-CDS Intra-chr q33 q12.3 Tumor suppressor gene 35592 ChimerSeq STARFusion TCGA_RNA-Seq SCMH1-MT1XP1 SCMH1 chr1 41536267 - MT1XP1 chr1 16567919 - Exonic hg19 LUSC TCGA-NC-A5HK 8 27 Out-of-frame Intra-chr p34.2 Transcription factor p36.13 35593 ChimerSeq STARFusion TCGA_RNA-Seq MLKL-TMEM231 MLKL chr16 74706166 - TMEM231 chr16 75573782 - Exonic hg19 LUSC TCGA-NC-A5HK 8 25 Out-of-frame Intra-chr q23.1 TKL:TKL-Unique q23.1 Seq+ 35594 ChimerSeq STARFusion TCGA_RNA-Seq CLCF1-PPP1CA CLCF1 chr11 67140995 - PPP1CA chr11 67168670 - Exonic hg19 LUSC TCGA-NC-A5HK 3 35 In-Frame Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 35595 ChimerSeq STARFusion TCGA_RNA-Seq MLKL-TMEM231 MLKL chr16 74706328 - TMEM231 chr16 75572903 - Exonic hg19 LUSC TCGA-NC-A5HK 5 25 Out-of-frame Intra-chr q23.1 TKL:TKL-Unique q23.1 Seq+ 35596 ChimerSeq STARFusion TCGA_RNA-Seq C22orf29-TXNRD2 C22orf29 chr22 19841966 - TXNRD2 chr22 19907122 - Exonic hg19 LUSC TCGA-NC-A5HK 4 17 5'UTR-CDS Intra-chr q11.21 q11.21 35597 ChimerSeq STARFusion TCGA_RNA-Seq GNB1L-TXNRD2 GNB1L chr22 19841966 - TXNRD2 chr22 19907122 - Exonic hg19 LUSC TCGA-NC-A5HK 4 16 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 35598 ChimerSeq STARFusion TCGA_RNA-Seq DGUOK-STAMBP DGUOK chr2 74174033 + STAMBP chr2 74097270 + Exonic hg19 LUSC TCGA-NC-A5HL 36 264 CDS-3'UTR Intra-chr p13.1 p13.1 Seq+ 35599 ChimerSeq STARFusion TCGA_RNA-Seq DGUOK-STAMBP DGUOK chr2 74174033 + STAMBP chr2 74100479 + Exonic hg19 LUSC TCGA-NC-A5HL 11 264 CDS-3'UTR Intra-chr p13.1 p13.1 Seq+ 35600 ChimerSeq STARFusion TCGA_RNA-Seq DGUOK-STAMBP DGUOK chr2 74154179 + STAMBP chr2 74097270 + Exonic hg19 LUSC TCGA-NC-A5HL 5 264 CDS-3'UTR Intra-chr p13.1 p13.1 Seq+ 35601 ChimerSeq STARFusion TCGA_RNA-Seq TNS1-TMBIM1 TNS1 chr2 218771933 - TMBIM1 chr2 219144849 - Exonic hg19 LUSC TCGA-NC-A5HL 10 102 5'UTR-CDS Intra-chr q35 q35 Seq+ 35602 ChimerSeq STARFusion TCGA_RNA-Seq TNS1-TMBIM1 TNS1 chr2 218771522 - TMBIM1 chr2 219144849 - Exonic hg19 LUSC TCGA-NC-A5HL 5 100 5'UTR-CDS Intra-chr q35 q35 Seq+ 35603 ChimerSeq STARFusion TCGA_RNA-Seq ITCH-NCOA6 ITCH chr20 33080402 + NCOA6 chr20 33303169 - Exonic hg19 LUSC TCGA-NC-A5HL 17 43 In-Frame Intra-chr q11.22 q11.22 35604 ChimerSeq STARFusion TCGA_RNA-Seq STRBP-DENND1A STRBP chr9 126030715 - DENND1A chr9 126165769 - Exonic hg19 LUSC TCGA-NC-A5HL 9 45 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 35605 ChimerSeq STARFusion TCGA_RNA-Seq STRBP-DENND1A STRBP chr9 125999109 - DENND1A chr9 126165769 - Exonic hg19 LUSC TCGA-NC-A5HL 6 44 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 35606 ChimerSeq STARFusion TCGA_RNA-Seq DPF2-CFL1 DPF2 chr11 65101389 + CFL1 chr11 65594080 - Exonic hg19 LUSC TCGA-NC-A5HL 11 18 CDS-3'UTR Intra-chr q13.1 q13.1 Seq+ 35607 ChimerSeq STARFusion TCGA_RNA-Seq NSD1-ZNF346 NSD1 chr5 176696808 + ZNF346 chr5 176468127 + Exonic hg19 LUSC TCGA-NC-A5HL 5 34 In-Frame Intra-chr q35.3 Oncogene q35.2 Transcription factor Seq+ 35608 ChimerSeq STARFusion TCGA_RNA-Seq LRRC8D-TMEM9 LRRC8D chr1 90286850 + TMEM9 chr1 201115976 - Exonic hg19 LUSC TCGA-NC-A5HL 5 21 5'UTR-CDS Intra-chr p22.2 q32.1 Seq+ 35609 ChimerSeq STARFusion TCGA_RNA-Seq CUX1-DDX11L1 CUX1 chr7 101671425 + DDX11L1 chr1 12010 + Exonic hg19 LUSC TCGA-NC-A5HL 2 30 CDS-3'UTR Inter-chr q22.1 Tumor suppressor gene Transcription factor p36.33 35610 ChimerSeq STARFusion TCGA_RNA-Seq LRRC8D-TMEM9 LRRC8D chr1 90287744 + TMEM9 chr1 201115976 - Exonic hg19 LUSC TCGA-NC-A5HL 2 21 5'UTR-CDS Intra-chr p22.2 q32.1 Seq+ 35611 ChimerSeq STARFusion TCGA_RNA-Seq SIL1-SMC1B SIL1 chr5 138532130 - SMC1B chr22 45779493 - Exonic hg19 LUSC TCGA-NC-A5HL 3 7 5'UTR-CDS Inter-chr q31.2 q13.31 Seq+ 35612 ChimerSeq STARFusion TCGA_RNA-Seq METTL4-STXBP5L METTL4 chr18 2544194 - STXBP5L chr3 120941850 + Exonic hg19 LUSC TCGA-NC-A5HL 2 4 Out-of-frame Inter-chr p11.32 q13.33 Seq+ 35613 ChimerSeq STARFusion TCGA_RNA-Seq CAMSAP1-UBAC1 CAMSAP1 chr9 138798846 - UBAC1 chr9 138845599 - Exonic hg19 LUSC TCGA-NC-A5HM 17 50 In-Frame Intra-chr q34.3 q34.3 Seq+ 35614 ChimerSeq STARFusion TCGA_RNA-Seq PMS2P5-STEAP1 PMS2P5 chr7 74306965 + STEAP1 chr7 89789072 + Exonic hg19 LUSC TCGA-NC-A5HM 3 11 5'UTR-5'UTR Intra-chr q11.23 q21.13 35615 ChimerSeq STARFusion TCGA_RNA-Seq COX7B2-PIP4K2A COX7B2 chr4 46911177 - PIP4K2A chr10 22898646 - Exonic hg19 LUSC TCGA-NC-A5HM 2 3 5'UTR-CDS Inter-chr p12 p12.2 Seq+ 35616 ChimerSeq STARFusion TCGA_RNA-Seq STAG3L1-CDK14 STAG3L1 chr7 74990729 + CDK14 chr7 90613463 + Exonic hg19 LUSC TCGA-NC-A5HM 2 3 5'UTR-CDS Intra-chr q11.23 q21.13 35617 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-NADK GNB1 chr1 1822259 - NADK chr1 1696885 - Exonic hg19 LUSC TCGA-NC-A5HN 21 4 5'UTR-5'UTR Intra-chr p36.33 p36.33 Seq+ 35618 ChimerSeq STARFusion TCGA_RNA-Seq SGMS2-HADH SGMS2 chr4 108779709 + HADH chr4 108930915 + Exonic hg19 LUSC TCGA-NC-A5HN 7 50 5'UTR-CDS Intra-chr q25 q25 Seq+ 35619 ChimerSeq STARFusion TCGA_RNA-Seq SGMS2-HADH SGMS2 chr4 108779709 + HADH chr4 108925820 + Exonic hg19 LUSC TCGA-NC-A5HN 3 49 5'UTR-CDS Intra-chr q25 q25 Seq+ 35620 ChimerSeq STARFusion TCGA_RNA-Seq SUPT5H-RPS16 SUPT5H chr19 39936277 + RPS16 chr19 39924401 - Exonic hg19 LUSC TCGA-NC-A5HN 9 11 5'UTR-3'UTR Intra-chr q13.2 q13.2 35621 ChimerSeq STARFusion TCGA_RNA-Seq FBXO17-ACTN4 FBXO17 chr19 39466226 - ACTN4 chr19 39191240 + Exonic hg19 LUSC TCGA-NC-A5HN 2 38 5'UTR-CDS Intra-chr Seq+ 35622 ChimerSeq STARFusion TCGA_RNA-Seq B3GNT5-ATP11B B3GNT5 chr3 182971260 + ATP11B chr3 182614488 + Exonic hg19 LUSC TCGA-NC-A5HN 5 18 5'UTR-CDS Intra-chr q27.1 q26.33 Oncogene 35623 ChimerSeq STARFusion TCGA_RNA-Seq RTKN-CTF1 RTKN chr2 74668833 - CTF1 chr16 30910736 + Exonic hg19 LUSC TCGA-NC-A5HN 2 21 Out-of-frame Inter-chr p13.1 p11.2 Seq+ 35624 ChimerSeq STARFusion TCGA_RNA-Seq EHBP1-VAV2 EHBP1 chr2 63101667 + VAV2 chr9 136726554 - Exonic hg19 LUSC TCGA-NC-A5HN 3 12 In-Frame Inter-chr p15 q34.2 Seq+ 35625 ChimerSeq STARFusion TCGA_RNA-Seq TMCC1-QSOX2 TMCC1 chr3 129546646 - QSOX2 chr9 139116755 - Exonic hg19 LUSC TCGA-NC-A5HN 2 11 In-Frame Inter-chr q22.1 q34.3 Seq+ 35626 ChimerSeq STARFusion TCGA_RNA-Seq C7orf60-TMEM168 C7orf60 chr7 112535624 - TMEM168 chr7 112425008 - Exonic hg19 LUSC TCGA-NC-A5HN 2 6 CDS-5'UTR Intra-chr q31.1 35627 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 LUSC TCGA-NC-A5HO 4 0 Out-of-frame Inter-chr q13.33 p21.1 35628 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ILF3 IGH@ chr14 106552427 - ILF3 chr19 10798056 + Exonic hg19 LUSC TCGA-NC-A5HD 19 1 Out-of-frame Inter-chr 32.33 p13.2 35629 ChimerSeq STARFusion TCGA_RNA-Seq ARL13B-NSUN3 ARL13B chr3 93722752 + NSUN3 chr3 93845055 + Exonic hg19 LUSC TCGA-NC-A5HD 3 8 In-Frame Intra-chr q11.1 q11.2 Seq+ 35630 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-NUP107 MDM2 chr12 69202271 + NUP107 chr12 69082742 + Exonic hg19 LUSC TCGA-NC-A5HE 13 94 In-Frame Intra-chr q15 Oncogene q15 Seq+ 35631 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LUSC TCGA-NC-A5HE 12 8 In-Frame Intra-chr p13.3 p13.3 35632 ChimerSeq STARFusion TCGA_RNA-Seq WDR18-HN1L WDR18 chr19 985975 + HN1L chr16 1747835 + Exonic hg19 LUSC TCGA-NC-A5HE 8 11 In-Frame Inter-chr p13.3 Seq+ 35633 ChimerSeq STARFusion TCGA_RNA-Seq HN1L-WDR18 HN1L chr16 1749048 + WDR18 chr19 989762 + Exonic hg19 LUSC TCGA-NC-A5HE 3 20 3'UTR-CDS Inter-chr p13.3 Seq+ 35634 ChimerSeq STARFusion TCGA_RNA-Seq HN1L-WDR18 HN1L chr16 1748844 + WDR18 chr19 989762 + Exonic hg19 LUSC TCGA-NC-A5HE 2 20 Out-of-frame Inter-chr p13.3 Seq+ 35635 ChimerSeq STARFusion TCGA_RNA-Seq NAB1-GULP1 NAB1 chr2 191537878 + GULP1 chr2 189448992 + Exonic hg19 LUSC TCGA-NC-A5HE 2 6 In-Frame Intra-chr q32.2 q32.1 Seq+ 35636 ChimerSeq STARFusion TCGA_RNA-Seq P4HB-L3MBTL4 P4HB chr17 79813018 - L3MBTL4 chr18 6093527 - Exonic hg19 LUSC TCGA-NC-A5HF 7 74 Out-of-frame Inter-chr q25.3 p11.31 Tumor suppressor gene Transcription factor Seq+ 35637 ChimerSeq STARFusion TCGA_RNA-Seq STAT3-PLCXD1 STAT3 chr17 40540297 - PLCXD1 chrY 118810 + Exonic hg19 LUSC TCGA-NC-A5HG 6 8 5'UTR-5'UTR Inter-chr q21.2 Oncogene Tumor suppressor gene Transcription factor p22.33 35638 ChimerSeq STARFusion TCGA_RNA-Seq EPAS1-CRIPT EPAS1 chr2 46525076 + CRIPT chr2 46845912 + Exonic hg19 LUSC TCGA-NC-A5HG 5 7 Out-of-frame Intra-chr p21 Tumor suppressor gene Transcription factor p21 Seq+ 35639 ChimerSeq STARFusion TCGA_RNA-Seq EPAS1-CRIPT EPAS1 chr2 46525076 + CRIPT chr2 46844373 + Exonic hg19 LUSC TCGA-NC-A5HG 3 7 CDS-5'UTR Intra-chr p21 Tumor suppressor gene Transcription factor p21 Seq+ 35640 ChimerSeq STARFusion TCGA_RNA-Seq STAT3-PLCXD1 STAT3 chr17 40540297 - PLCXD1 chrX 168810 + Exonic hg19 LUSC TCGA-NC-A5HG 3 4 5'UTR-5'UTR Inter-chr q21.2 Oncogene Tumor suppressor gene Transcription factor p22.33 35641 ChimerSeq STARFusion TCGA_RNA-Seq FGF12-ZNF595 FGF12 chr3 192444970 - ZNF595 chr4 59323 + Exonic hg19 LUSC TCGA-NK-A5CR 4 3 In-Frame Inter-chr q29 p16.3 Transcription factor Seq+ 35642 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V1C2-IGH@ ATP6V1C2 chr2 10908933 + IGH@ chr14 106330467 - Exonic hg19 LUSC TCGA-56-8503 46 7 Out-of-frame Inter-chr p25.1 32.33 35643 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V1C2-IGHM ATP6V1C2 chr2 10908933 + IGHM chr14 106330467 - Exonic hg19 LUSC TCGA-56-8503 46 2 Out-of-frame Inter-chr p25.1 q32.33 35644 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V1C2-IGH@ ATP6V1C2 chr2 10908933 + IGH@ chr14 106330066 - Exonic hg19 LUSC TCGA-56-8503 30 5 Out-of-frame Inter-chr p25.1 32.33 35645 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V1C2-IGHM ATP6V1C2 chr2 10908933 + IGHM chr14 106330066 - Exonic hg19 LUSC TCGA-56-8503 30 2 Out-of-frame Inter-chr p25.1 q32.33 35646 ChimerSeq STARFusion TCGA_RNA-Seq SPG11-CD9 SPG11 chr15 44941064 - CD9 chr12 6334592 + Exonic hg19 LUSC TCGA-56-8503 10 30 In-Frame Inter-chr q21.1 p13.31 Seq+ 35647 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-GNAS IGH@ chr14 107178827 - GNAS chr20 57431021 + Exonic hg19 LUSC TCGA-56-8503 9 16 Out-of-frame Inter-chr 32.33 q13.32 Oncogene 35648 ChimerSeq STARFusion TCGA_RNA-Seq ATRN-TNKS2 ATRN chr20 3565527 + TNKS2 chr10 93572740 + Exonic hg19 LUSC TCGA-56-8503 4 26 In-Frame Inter-chr p13 q23.32 Seq+ 35649 ChimerSeq STARFusion TCGA_RNA-Seq HECTD4-IGH@ HECTD4 chr12 112673509 - IGH@ chr14 106330472 - Exonic hg19 LUSC TCGA-56-8503 8 2 Out-of-frame Inter-chr q24.13 32.33 35650 ChimerSeq STARFusion TCGA_RNA-Seq HECTD4-IGHG3 HECTD4 chr12 112673509 - IGHG3 chr14 106330472 - Exonic hg19 LUSC TCGA-56-8503 8 1 Out-of-frame Inter-chr q24.13 35651 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-MICAL1 IGH@ chr14 106641562 - MICAL1 chr6 109770116 - Exonic hg19 LUSC TCGA-56-8503 6 1 Out-of-frame Inter-chr 32.33 q21 35652 ChimerSeq STARFusion TCGA_RNA-Seq NTRK2-IGH@ NTRK2 chr9 87490237 + IGH@ chr14 106330468 - Exonic hg19 LUSC TCGA-56-8503 6 1 Out-of-frame Inter-chr q21.33 Oncogene 32.33 35653 ChimerSeq STARFusion TCGA_RNA-Seq NTRK2-IGHG3 NTRK2 chr9 87490239 + IGHG3 chr14 106330466 - Exonic hg19 LUSC TCGA-56-8503 6 1 Out-of-frame Inter-chr q21.33 Oncogene 35654 ChimerSeq STARFusion TCGA_RNA-Seq HECTD4-IGH@ HECTD4 chr12 112673509 - IGH@ chr14 106330071 - Exonic hg19 LUSC TCGA-56-8503 5 2 Out-of-frame Inter-chr q24.13 32.33 35655 ChimerSeq STARFusion TCGA_RNA-Seq HECTD4-IGHG3 HECTD4 chr12 112673509 - IGHG3 chr14 106330071 - Exonic hg19 LUSC TCGA-56-8503 5 1 Out-of-frame Inter-chr q24.13 35656 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106111129 - Exonic hg19 LUSC TCGA-77-A5FZ 184 1 Out-of-frame Inter-chr q37.3 35657 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106136184 - Exonic hg19 LUSC TCGA-77-A5FZ 119 1 Out-of-frame Inter-chr q37.3 35658 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106209410 - Exonic hg19 LUSC TCGA-77-A5FZ 23 1 Out-of-frame Inter-chr q37.3 35659 ChimerSeq STARFusion TCGA_RNA-Seq API5-FOLH1 API5 chr11 43357544 + FOLH1 chr11 49168497 - Exonic hg19 LUSC TCGA-39-5016 2 27 Out-of-frame Intra-chr p12 p11.12 Seq+ 35660 ChimerSeq STARFusion TCGA_RNA-Seq SYPL1-TMEM168 SYPL1 chr7 105738136 - TMEM168 chr7 112407799 - Exonic hg19 LUSC TCGA-39-5011 54 289 Out-of-frame Intra-chr q22.3 q31.1 Seq+ 35661 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V1F-CPED1 ATP6V1F chr7 128503116 + CPED1 chr7 120935494 + Exonic hg19 LUSC TCGA-39-5011 20 164 Out-of-frame Intra-chr q32.1 q31.31 Seq+ 35662 ChimerSeq STARFusion TCGA_RNA-Seq AKAP9-PPP2R3B AKAP9 chr7 91570461 + PPP2R3B chrY 272325 - Exonic hg19 LUSC TCGA-39-5011 13 81 CDS-3'UTR Inter-chr q21.2 Oncogene p22.33 Seq+ 35663 ChimerSeq STARFusion TCGA_RNA-Seq HIPK2-GRM8 HIPK2 chr7 139285163 - GRM8 chr7 126249552 - Exonic hg19 LUSC TCGA-39-5011 12 81 Out-of-frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q31.33 Oncogene Seq+ 35664 ChimerSeq STARFusion TCGA_RNA-Seq AKAP9-PPP2R3B AKAP9 chr7 91570461 + PPP2R3B chrX 322325 - Exonic hg19 LUSC TCGA-39-5011 7 40 Out-of-frame Inter-chr q21.2 Oncogene p22.33 Seq+ 35665 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-NFATC1 IGH@ chr14 107083255 - NFATC1 chr18 77208714 + Exonic hg19 LUSC TCGA-39-5011 13 1 Out-of-frame Inter-chr 32.33 q23 Transcription factor 35666 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-NFATC1 IGH@ chr14 107095125 - NFATC1 chr18 77208714 + Exonic hg19 LUSC TCGA-39-5011 10 1 Out-of-frame Inter-chr 32.33 q23 Transcription factor 35667 ChimerSeq STARFusion TCGA_RNA-Seq RB1-CNIH3 RB1 chr13 48881542 + CNIH3 chr1 224868660 + Exonic hg19 LUSC TCGA-60-2695 14 49 In-Frame Inter-chr q14.2 Oncogene Tumor suppressor gene q42.12 Seq+ 35668 ChimerSeq STARFusion TCGA_RNA-Seq RPL15-IGL@ RPL15 chr3 23958485 + IGL@ chr22 23247167 + Exonic hg19 LUSC TCGA-60-2695 13 1 Out-of-frame Inter-chr p24.2 q11.22 35669 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-MOGS IGH@ chr14 106877620 - MOGS chr2 74690286 - Exonic hg19 LUSC TCGA-60-2695 12 1 Out-of-frame Inter-chr 32.33 p13.1 35670 ChimerSeq STARFusion TCGA_RNA-Seq SEMA4B-LINC00925 SEMA4B chr15 90744967 + LINC00925 chr15 89921273 + Exonic hg19 LUSC TCGA-60-2695 6 9 Out-of-frame Intra-chr q26.1 35671 ChimerSeq STARFusion TCGA_RNA-Seq MBNL1-DCUN1D1 MBNL1 chr3 152018156 + DCUN1D1 chr3 182683541 - Exonic hg19 LUSC TCGA-60-2696 7 60 In-Frame Intra-chr q25.1 q26.33 Oncogene Seq+ 35672 ChimerSeq STARFusion TCGA_RNA-Seq STX16-GNAS STX16 chr20 57245659 + GNAS chr20 57463604 + Exonic hg19 LUSC TCGA-60-2696 10 37 5'UTR-5'UTR Intra-chr q13.32 q13.32 Oncogene Seq+ 35673 ChimerSeq STARFusion TCGA_RNA-Seq CHI3L1-IGH@ CHI3L1 chr1 203148872 - IGH@ chr14 106330467 - Exonic hg19 LUSC TCGA-60-2696 17 1 Out-of-frame Inter-chr q32.1 32.33 35674 ChimerSeq STARFusion TCGA_RNA-Seq MBNL1-DCUN1D1 MBNL1 chr3 151986881 + DCUN1D1 chr3 182683541 - Exonic hg19 LUSC TCGA-60-2696 2 57 5'UTR-CDS Intra-chr q25.1 q26.33 Oncogene Seq+ 35675 ChimerSeq STARFusion TCGA_RNA-Seq CHI3L1-IGH@ CHI3L1 chr1 203148872 - IGH@ chr14 106330066 - Exonic hg19 LUSC TCGA-60-2696 13 1 Out-of-frame Inter-chr q32.1 32.33 35676 ChimerSeq STARFusion TCGA_RNA-Seq FNIP2-IGH@ FNIP2 chr4 159757024 + IGH@ chr14 106209410 - Exonic hg19 LUSC TCGA-60-2697 24 1 Out-of-frame Inter-chr q32.1 32.33 35677 ChimerSeq STARFusion TCGA_RNA-Seq RALGPS1-IGH@ RALGPS1 chr9 129977062 + IGH@ chr14 106330074 - Exonic hg19 LUSC TCGA-60-2697 19 0 Out-of-frame Inter-chr q33.3 32.33 35678 ChimerSeq STARFusion TCGA_RNA-Seq RALGPS1-IGHG3 RALGPS1 chr9 129977062 + IGHG3 chr14 106330074 - Exonic hg19 LUSC TCGA-60-2697 19 0 Out-of-frame Inter-chr q33.3 35679 ChimerSeq STARFusion TCGA_RNA-Seq RALGPS1-IGHJ5 RALGPS1 chr9 129977062 + IGHJ5 chr14 106330074 - Exonic hg19 LUSC TCGA-60-2697 19 0 Out-of-frame Inter-chr q33.3 35680 ChimerSeq STARFusion TCGA_RNA-Seq MED20-TLL2 MED20 chr6 41884523 - TLL2 chr10 98240216 - Exonic hg19 LUSC TCGA-60-2698 5 26 In-Frame Inter-chr p21.1 q24.1 Seq+ 35681 ChimerSeq STARFusion TCGA_RNA-Seq CRMP1-IGKC CRMP1 chr4 5862863 - IGKC chr2 89161070 - Exonic hg19 LUSC TCGA-39-5019 26 0 Out-of-frame Inter-chr p16.2 p11.2 35682 ChimerSeq STARFusion TCGA_RNA-Seq CRMP1-IGKJ2 CRMP1 chr4 5862863 - IGKJ2 chr2 89161070 - Exonic hg19 LUSC TCGA-39-5019 26 0 Out-of-frame Inter-chr p16.2 p11.2 35683 ChimerSeq STARFusion TCGA_RNA-Seq TFIP11-AMPD1 TFIP11 chr22 26908065 - AMPD1 chr1 115231362 - Exonic hg19 LUSC TCGA-39-5019 4 24 5'UTR-CDS Inter-chr q12.1 p13.2 Seq+ 35684 ChimerSeq STARFusion TCGA_RNA-Seq ZNF653-NFIC ZNF653 chr19 11616303 - NFIC chr19 3425104 + Exonic hg19 LUSC TCGA-39-5019 5 19 Out-of-frame Intra-chr p13.2 Transcription factor p13.3 Transcription factor Seq+ 35685 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LUSC TCGA-39-5019 3 23 In-Frame Intra-chr p13.3 p13.3 35686 ChimerSeq STARFusion TCGA_RNA-Seq FZR1-CNN1 FZR1 chr19 3523056 + CNN1 chr19 11651891 + Exonic hg19 LUSC TCGA-39-5019 2 25 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.2 Tumor suppressor gene Seq+ 35687 ChimerSeq STARFusion TCGA_RNA-Seq C3orf55-CHRD C3orf55 chr3 157261298 + CHRD chr3 184106375 + Exonic hg19 LUSC TCGA-39-5019 2 16 5'UTR-CDS Intra-chr q27.1 Seq+ 35688 ChimerSeq STARFusion TCGA_RNA-Seq DHRS1-METTL3 DHRS1 chr14 24768163 - METTL3 chr14 21970045 - Exonic hg19 LUSC TCGA-39-5019 2 14 In-Frame Intra-chr q12 q11.2 Seq+ 35689 ChimerSeq STARFusion TCGA_RNA-Seq LIFR-BCAS3 LIFR chr5 38496484 - BCAS3 chr17 59445688 + Exonic hg19 LUSC TCGA-68-8250 17 111 In-Frame Inter-chr p13.1 Oncogene Tumor suppressor gene q23.2 Seq+ 35690 ChimerSeq STARFusion TCGA_RNA-Seq SMAD4-IGHG3 SMAD4 chr18 48556646 + IGHG3 chr14 106237740 - Exonic hg19 LUSC TCGA-68-8250 10 1 Out-of-frame Inter-chr q21.2 Oncogene Tumor suppressor gene Transcription factor 35691 ChimerSeq STARFusion TCGA_RNA-Seq AGAP3-RELN AGAP3 chr7 150784159 + RELN chr7 103191743 - Exonic hg19 LUSC TCGA-68-8250 5 19 Out-of-frame Intra-chr q36.1 q22.1 Seq+ 35692 ChimerSeq STARFusion TCGA_RNA-Seq SMAD4-IGHG3 SMAD4 chr18 48556640 + IGHG3 chr14 106237746 - Exonic hg19 LUSC TCGA-68-8250 9 1 Out-of-frame Inter-chr q21.2 Oncogene Tumor suppressor gene Transcription factor 35693 ChimerSeq STARFusion TCGA_RNA-Seq GIGYF2-ATG16L1 GIGYF2 chr2 233562102 + ATG16L1 chr2 234164748 + Exonic hg19 LUSC TCGA-68-8250 3 15 5'UTR-5'UTR Intra-chr q37.1 Seq+ 35694 ChimerSeq STARFusion TCGA_RNA-Seq RELN-CHRM2 RELN chr7 103191514 - CHRM2 chr7 136635750 + Exonic hg19 LUSC TCGA-68-8250 3 11 CDS-5'UTR Intra-chr q22.1 q33 Seq+ 35695 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-WDR52 ZBTB20 chr3 114790066 - WDR52 chr3 113022964 - Exonic hg19 LUSC TCGA-68-8250 2 5 5'UTR-CDS Intra-chr q13.31 Transcription factor Seq+ 35696 ChimerSeq STARFusion TCGA_RNA-Seq HECTD4-PEBP1 HECTD4 chr12 112743868 - PEBP1 chr12 118575844 + Exonic hg19 LUSC TCGA-34-5232 22 92 Out-of-frame Intra-chr q24.13 q24.23 Tumor suppressor gene Seq+ 35697 ChimerSeq STARFusion TCGA_RNA-Seq CEP250-IGH@ CEP250 chr20 34043118 + IGH@ chr14 106330068 - Exonic hg19 LUSC TCGA-34-5232 43 4 Out-of-frame Inter-chr q11.22 32.33 35698 ChimerSeq STARFusion TCGA_RNA-Seq CEP250-IGHG3 CEP250 chr20 34043118 + IGHG3 chr14 106330068 - Exonic hg19 LUSC TCGA-34-5232 43 2 Out-of-frame Inter-chr q11.22 35699 ChimerSeq STARFusion TCGA_RNA-Seq TSIX-IGKC TSIX chrX 73013450 + IGKC chr2 89161432 - Exonic hg19 LUSC TCGA-34-5232 32 1 Out-of-frame Inter-chr q13.2 p11.2 35700 ChimerSeq STARFusion TCGA_RNA-Seq OR6B2-IGHG2 OR6B2 chr2 240969093 - IGHG2 chr14 106111129 - Exonic hg19 LUSC TCGA-34-5232 21 0 Out-of-frame Inter-chr q37.3 35701 ChimerSeq STARFusion TCGA_RNA-Seq EIF4A2-IGKC EIF4A2 chr3 186502017 + IGKC chr2 89161431 - Exonic hg19 LUSC TCGA-34-5232 19 2 Out-of-frame Inter-chr q27.3 p11.2 35702 ChimerSeq STARFusion TCGA_RNA-Seq ULK1-FBXW8 ULK1 chr12 132403929 + FBXW8 chr12 117461952 + Exonic hg19 LUSC TCGA-34-5232 8 40 In-Frame Intra-chr q24.33 Other:ULK q24.22 Seq+ 35703 ChimerSeq STARFusion TCGA_RNA-Seq FBRSL1-CKAP4 FBRSL1 chr12 133067447 + CKAP4 chr12 106670327 - Exonic hg19 LUSC TCGA-34-5232 8 25 CDS-5'UTR Intra-chr q24.33 q23.3 Seq+ 35704 ChimerSeq STARFusion TCGA_RNA-Seq NOC4L-STAB2 NOC4L chr12 132633440 + STAB2 chr12 104142741 + Exonic hg19 LUSC TCGA-34-5232 7 28 In-Frame Intra-chr q24.33 q23.3 Seq+ 35705 ChimerSeq STARFusion TCGA_RNA-Seq APPL2-CIT APPL2 chr12 105629737 - CIT chr12 120198859 - Exonic hg19 LUSC TCGA-34-5232 6 28 In-Frame Intra-chr q23.3 q24.23 Seq+ 35706 ChimerSeq STARFusion TCGA_RNA-Seq ULK1-FBXW8 ULK1 chr12 132402099 + FBXW8 chr12 117461952 + Exonic hg19 LUSC TCGA-34-5232 3 40 Out-of-frame Intra-chr q24.33 Other:ULK q24.22 Seq+ 35707 ChimerSeq STARFusion TCGA_RNA-Seq ULK1-FBXW8 ULK1 chr12 132404135 + FBXW8 chr12 117461952 + Exonic hg19 LUSC TCGA-34-5232 2 40 Out-of-frame Intra-chr q24.33 Other:ULK q24.22 Seq+ 35708 ChimerSeq STARFusion TCGA_RNA-Seq ATP2A2-EP400 ATP2A2 chr12 110729929 + EP400 chr12 132464242 + Exonic hg19 LUSC TCGA-34-5232 4 15 In-Frame Intra-chr q24.11 q24.33 Oncogene Seq+ 35709 ChimerSeq STARFusion TCGA_RNA-Seq CIT-FAM222A CIT chr12 120204891 - FAM222A chr12 110181906 + Exonic hg19 LUSC TCGA-34-5232 3 14 CDS-5'UTR Intra-chr q24.23 q24.11 Seq+ 35710 ChimerSeq STARFusion TCGA_RNA-Seq ATP2A2-EP400 ATP2A2 chr12 110729929 + EP400 chr12 132464239 + Exonic hg19 LUSC TCGA-34-5232 2 15 In-Frame Intra-chr q24.11 q24.33 Oncogene Seq+ 35711 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHA1 SLC7A5 chr16 87868137 - IGHA1 chr14 106175004 - Exonic hg19 LUSC TCGA-34-5231 39 1 Out-of-frame Inter-chr q24.2 35712 ChimerSeq STARFusion TCGA_RNA-Seq ITGB5-IGL@ ITGB5 chr3 124485081 - IGL@ chr22 23248513 + Exonic hg19 LUSC TCGA-34-5231 25 1 Out-of-frame Inter-chr q21.2 q11.22 35713 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHJ1-LINGO3 PLEKHJ1 chr19 2235458 - LINGO3 chr19 2290585 - Exonic hg19 LUSC TCGA-34-5231 10 30 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 35714 ChimerSeq STARFusion TCGA_RNA-Seq DISC1FP1-TRIM49C DISC1FP1 chr11 90535030 + TRIM49C chr11 89804864 + Exonic hg19 LUSC TCGA-34-5231 3 13 Out-of-frame Intra-chr q14.3 q14.3 35715 ChimerSeq STARFusion TCGA_RNA-Seq DISC1FP1-TRIM49C DISC1FP1 chr11 90535030 + TRIM49C chr11 89773033 + Exonic hg19 LUSC TCGA-34-5231 2 12 Out-of-frame Intra-chr q14.3 q14.3 35716 ChimerSeq STARFusion TCGA_RNA-Seq NRIP1-LINC00478 NRIP1 chr21 16415816 - LINC00478 chr21 17979314 + Exonic hg19 LUSC TCGA-34-5236 61 337 5'UTR-5'UTR Intra-chr q21.1 Seq+ 35717 ChimerSeq STARFusion TCGA_RNA-Seq NRIP1-LINC00478 NRIP1 chr21 16415816 - LINC00478 chr21 17966660 + Exonic hg19 LUSC TCGA-34-5236 37 331 5'UTR-5'UTR Intra-chr q21.1 Seq+ 35718 ChimerSeq STARFusion TCGA_RNA-Seq PLCXD2-CD96 PLCXD2 chr3 111451550 + CD96 chr3 111384374 + Exonic hg19 LUSC TCGA-34-5236 18 189 3'UTR-3'UTR Intra-chr q13.2 q13.13 Seq+ 35719 ChimerSeq STARFusion TCGA_RNA-Seq PHLDB2-CD96 PHLDB2 chr3 111451550 + CD96 chr3 111384374 + Exonic hg19 LUSC TCGA-34-5236 18 181 5'UTR-3'UTR Intra-chr q13.2 q13.13 Seq+ 35720 ChimerSeq STARFusion TCGA_RNA-Seq PANX1-CCDC67 PANX1 chr11 93862659 + CCDC67 chr11 93170709 + Exonic hg19 LUSC TCGA-34-5236 21 77 Out-of-frame Intra-chr q21 Tumor suppressor gene Seq+ 35721 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH3-DEFB132 NOTCH3 chr19 15278060 - DEFB132 chr20 239718 + Exonic hg19 LUSC TCGA-34-5236 9 50 In-Frame Inter-chr p13.12 Oncogene Tumor suppressor gene p13 Seq+ 35722 ChimerSeq STARFusion TCGA_RNA-Seq ZFHX4-VRK1 ZFHX4 chr8 77620283 + VRK1 chr14 97397668 + Exonic hg19 LUSC TCGA-34-5236 7 8 CDS-3'UTR Inter-chr q21.13 Transcription factor q32.2 CK1:VRK Seq+ 35723 ChimerSeq STARFusion TCGA_RNA-Seq ALDH3A2-SLC47A1 ALDH3A2 chr17 19558700 + SLC47A1 chr17 19452948 + Exonic hg19 LUSC TCGA-34-5236 3 12 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 35724 ChimerSeq STARFusion TCGA_RNA-Seq SP3-STK39 SP3 chr2 174777798 - STK39 chr2 169038600 - Exonic hg19 LUSC TCGA-34-5236 2 13 In-Frame Intra-chr q31.1 Transcription factor q24.3 Seq+ 35725 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSD1 PRSS27 chr16 2763530 - TPSD1 chr16 1308333 + Exonic hg19 LUSC TCGA-34-5234 12 10 In-Frame Intra-chr p13.3 p13.3 35726 ChimerSeq STARFusion TCGA_RNA-Seq RIC8A-IGL@ RIC8A chr11 210394 + IGL@ chr22 23247167 + Exonic hg19 LUSC TCGA-34-5234 10 0 Out-of-frame Inter-chr p15.5 q11.22 35727 ChimerSeq STARFusion TCGA_RNA-Seq RIC8A-IGLJ3 RIC8A chr11 210394 + IGLJ3 chr22 23247167 + Exonic hg19 LUSC TCGA-34-5234 10 0 Out-of-frame Inter-chr p15.5 q11.22 35728 ChimerSeq STARFusion TCGA_RNA-Seq RIC8A-IGLC3 RIC8A chr11 210394 + IGLC3 chr22 23247167 + Exonic hg19 LUSC TCGA-34-5234 9 0 Out-of-frame Inter-chr p15.5 q11.22 35729 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSD1 PRSS27 chr16 2763530 - TPSD1 chr16 1292077 + Exonic hg19 LUSC TCGA-34-5234 3 10 CDS-5'UTR Intra-chr p13.3 p13.3 35730 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-LOH12CR1 ETV6 chr12 11803094 + LOH12CR1 chr12 12588562 + Exonic hg19 LUSC TCGA-34-A5IX 25 92 Out-of-frame Intra-chr p13.2 Tumor suppressor gene Transcription factor Seq+ 35731 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHG1-MTHFD1L PLEKHG1 chr6 150971922 + MTHFD1L chr6 151355629 + Exonic hg19 LUSC TCGA-34-A5IX 13 27 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 35732 ChimerSeq STARFusion TCGA_RNA-Seq DOCK9-STK24 DOCK9 chr13 99607689 - STK24 chr13 99134575 - Exonic hg19 LUSC TCGA-34-A5IX 4 29 In-Frame Intra-chr q32.3 q32.2 35733 ChimerSeq STARFusion TCGA_RNA-Seq GALNT18-ST5 GALNT18 chr11 11642906 - ST5 chr11 8772272 - Exonic hg19 LUSC TCGA-34-A5IX 7 16 Out-of-frame Intra-chr p15.4 p15.4 Tumor suppressor gene Seq+ 35734 ChimerSeq STARFusion TCGA_RNA-Seq BMPR1A-FAM35A BMPR1A chr10 88635842 + FAM35A chr10 88911107 + Exonic hg19 LUSC TCGA-34-A5IX 5 19 CDS-5'UTR Intra-chr q23.2 TKL:STKR Oncogene Tumor suppressor gene q23.2 35735 ChimerSeq STARFusion TCGA_RNA-Seq PTEN-KIF20B PTEN chr10 89653866 + KIF20B chr10 91497144 + Exonic hg19 LUSC TCGA-34-A5IX 5 16 Out-of-frame Intra-chr q23.31 Oncogene Tumor suppressor gene q23.31 Seq+ 35736 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF3-NF2 ZNRF3 chr22 29383189 + NF2 chr22 30032740 + Exonic hg19 LUSC TCGA-34-A5IX 3 24 In-Frame Intra-chr q12.1 q12.2 Oncogene Tumor suppressor gene Seq+ 35737 ChimerSeq STARFusion TCGA_RNA-Seq DAZAP1-CSNK1G2 DAZAP1 chr19 1421257 + CSNK1G2 chr19 1969507 + Exonic hg19 LUSC TCGA-34-A5IX 4 17 CDS-5'UTR Intra-chr p13.3 p13.3 35738 ChimerSeq STARFusion TCGA_RNA-Seq GALNT18-ST5 GALNT18 chr11 11642906 - ST5 chr11 8752756 - Exonic hg19 LUSC TCGA-34-A5IX 3 16 Out-of-frame Intra-chr p15.4 p15.4 Tumor suppressor gene Seq+ 35739 ChimerSeq STARFusion TCGA_RNA-Seq SETD1B-MLXIP SETD1B chr12 122243122 + MLXIP chr12 122616839 + Exonic hg19 LUSC TCGA-34-A5IX 3 15 Out-of-frame Intra-chr q24.31 Transcription factor Seq+ 35740 ChimerSeq STARFusion TCGA_RNA-Seq GALNT18-ST5 GALNT18 chr11 11642906 - ST5 chr11 8739439 - Exonic hg19 LUSC TCGA-34-A5IX 2 16 Out-of-frame Intra-chr p15.4 p15.4 Tumor suppressor gene Seq+ 35741 ChimerSeq STARFusion TCGA_RNA-Seq TMSB10-HAP1 TMSB10 chr2 85133236 + HAP1 chr17 39877732 - Exonic hg19 LUSC TCGA-34-A5IX 3 12 Out-of-frame Inter-chr p11.2 q21.2 35742 ChimerSeq STARFusion TCGA_RNA-Seq HS6ST1-LIMS2 HS6ST1 chr2 129075611 - LIMS2 chr2 128415136 - Exonic hg19 LUSC TCGA-34-A5IX 4 5 In-Frame Intra-chr q14.3 q14.3 35743 ChimerSeq STARFusion TCGA_RNA-Seq NF2-MTMR3 NF2 chr22 30000101 + MTMR3 chr22 30353025 + Exonic hg19 LUSC TCGA-34-A5IX 3 6 CDS-5'UTR Intra-chr q12.2 Oncogene Tumor suppressor gene q12.2 Seq+ 35744 ChimerSeq STARFusion TCGA_RNA-Seq STX6-TNR STX6 chr1 180971742 - TNR chr1 175375913 - Exonic hg19 LUSC TCGA-34-A5IX 3 4 CDS-5'UTR Intra-chr q25.3 q25.1 Seq+ 35745 ChimerSeq STARFusion TCGA_RNA-Seq HS6ST1-LIMS2 HS6ST1 chr2 129075611 - LIMS2 chr2 128400647 - Exonic hg19 LUSC TCGA-34-A5IX 2 5 In-Frame Intra-chr q14.3 q14.3 35746 ChimerSeq STARFusion TCGA_RNA-Seq RAF1-C3orf83 RAF1 chr3 12705312 - C3orf83 chr3 12584728 - Exonic hg19 LUSC TCGA-34-A5IX 2 4 Out-of-frame Intra-chr p25.2 TKL:RAF Oncogene 35747 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-LZTS2 IGH@ chr14 107034727 - LZTS2 chr10 102760129 + Exonic hg19 LUSC TCGA-34-5239 109 2 Out-of-frame Inter-chr 32.33 q24.31 35748 ChimerSeq STARFusion TCGA_RNA-Seq ELMO1-IGH@ ELMO1 chr7 37025574 - IGH@ chr14 107170239 - Exonic hg19 LUSC TCGA-34-5239 30 1 Out-of-frame Inter-chr p14.1 32.33 35749 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-KMT2B IGH@ chr14 106380224 - KMT2B chr19 36219016 + Exonic hg19 LUSC TCGA-34-5239 24 1 Out-of-frame Inter-chr 32.33 q13.12 Oncogene Transcription factor 35750 ChimerSeq STARFusion TCGA_RNA-Seq AIM1L-IGL@ AIM1L chr1 26663131 - IGL@ chr22 23235961 + Exonic hg19 LUSC TCGA-34-5239 23 0 Out-of-frame Inter-chr q11.22 35751 ChimerSeq STARFusion TCGA_RNA-Seq AIM1L-IGLC1 AIM1L chr1 26663131 - IGLC1 chr22 23235961 + Exonic hg19 LUSC TCGA-34-5239 23 0 Out-of-frame Inter-chr q11.22 35752 ChimerSeq STARFusion TCGA_RNA-Seq AIM1L-IGLJ1 AIM1L chr1 26663131 - IGLJ1 chr22 23235961 + Exonic hg19 LUSC TCGA-34-5239 23 0 Out-of-frame Inter-chr q11.22 35753 ChimerSeq STARFusion TCGA_RNA-Seq AIM1L-IGLL5 AIM1L chr1 26663131 - IGLL5 chr22 23235961 + Exonic hg19 LUSC TCGA-34-5239 23 0 Out-of-frame Inter-chr q11.22 35754 ChimerSeq STARFusion TCGA_RNA-Seq TTN-IGL@ TTN chr2 179407172 - IGL@ chr22 23247175 + Exonic hg19 LUSC TCGA-34-5239 16 0 Out-of-frame Inter-chr q31.2 CAMK:MLCK q11.22 35755 ChimerSeq STARFusion TCGA_RNA-Seq TTN-IGLC3 TTN chr2 179407172 - IGLC3 chr22 23247175 + Exonic hg19 LUSC TCGA-34-5239 16 0 Out-of-frame Inter-chr q31.2 CAMK:MLCK q11.22 35756 ChimerSeq STARFusion TCGA_RNA-Seq TTN-IGLJ3 TTN chr2 179407172 - IGLJ3 chr22 23247175 + Exonic hg19 LUSC TCGA-34-5239 16 0 Out-of-frame Inter-chr q31.2 CAMK:MLCK q11.22 35757 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 LUSC TCGA-58-A46M 21 0 Out-of-frame Inter-chr q13.33 p21.1 35758 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106111129 - Exonic hg19 LUSC TCGA-58-A46M 12 1 Out-of-frame Inter-chr q37.3 35759 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106136184 - Exonic hg19 LUSC TCGA-58-A46M 9 1 Out-of-frame Inter-chr q37.3 35760 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK3-DOCK3 MAPKAPK3 chr3 50655215 + DOCK3 chr3 50927457 + Exonic hg19 LUSC TCGA-58-A46L 4 19 In-Frame Intra-chr p21.2 CAMK:MAPKAPK p21.2 35761 ChimerSeq STARFusion TCGA_RNA-Seq DPM1-PSMD10P1 DPM1 chr20 49571723 - PSMD10P1 chr20 49530312 + Exonic hg19 LUSC TCGA-58-A46L 3 8 Out-of-frame Intra-chr q13.13 q13.13 Seq+ 35762 ChimerSeq STARFusion TCGA_RNA-Seq MON2-WBSCR16 MON2 chr12 62895478 + WBSCR16 chr7 74471723 - Exonic hg19 LUSC TCGA-85-A513 15 71 In-Frame Inter-chr q14.1 Seq+ 35763 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-CPM CPSF6 chr12 69656342 + CPM chr12 69326620 - Exonic hg19 LUSC TCGA-85-A513 2 17 3'UTR-5'UTR Intra-chr q15 q15 Seq+ 35764 ChimerSeq STARFusion TCGA_RNA-Seq MYSM1-DAB1 MYSM1 chr1 59150825 - DAB1 chr1 57611102 - Exonic hg19 LUSC TCGA-85-A513 3 10 Out-of-frame Intra-chr p32.1 Transcription factor p32.1 Seq+ 35765 ChimerSeq STARFusion TCGA_RNA-Seq PGD-NTSR1 PGD chr1 10459761 + NTSR1 chr20 61386037 + Exonic hg19 LUSC TCGA-58-A46K 7 60 In-Frame Inter-chr p36.22 q13.33 Seq+ 35766 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ANAPC5 IGH@ chr14 106725199 - ANAPC5 chr12 121790040 - Exonic hg19 LUSC TCGA-58-A46K 3 1 Out-of-frame Inter-chr 32.33 q24.31 35767 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-CASC11 PVT1 chr8 128806980 + CASC11 chr8 128746205 - Exonic hg19 LUSC TCGA-56-5898 239 726 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 35768 ChimerSeq STARFusion TCGA_RNA-Seq B3GNT5-ALG3 B3GNT5 chr3 182971260 + ALG3 chr3 183963600 - Exonic hg19 LUSC TCGA-56-5898 32 211 5'UTR-CDS Intra-chr q27.1 q27.1 Seq+ 35769 ChimerSeq STARFusion TCGA_RNA-Seq ECE2-HTR3C ECE2 chr3 183967678 + HTR3C chr3 183777616 + Exonic hg19 LUSC TCGA-56-5898 32 105 In-Frame Intra-chr q27.1 q27.1 Seq+ 35770 ChimerSeq STARFusion TCGA_RNA-Seq ECE2-HTR3C ECE2 chr3 183967678 + HTR3C chr3 183756197 + Exonic hg19 LUSC TCGA-56-5898 9 86 CDS-5'UTR Intra-chr q27.1 q27.1 Seq+ 35771 ChimerSeq STARFusion TCGA_RNA-Seq STRADA-LYZ STRADA chr17 61805694 - LYZ chr12 69743888 + Exonic hg19 LUSC TCGA-56-5898 5 61 Out-of-frame Inter-chr q23.3 Tumor suppressor gene q15 Seq+ 35772 ChimerSeq STARFusion TCGA_RNA-Seq STRADA-LYZ STRADA chr17 61803998 - LYZ chr12 69743888 + Exonic hg19 LUSC TCGA-56-5898 2 61 In-Frame Inter-chr q23.3 Tumor suppressor gene q15 Seq+ 35773 ChimerSeq STARFusion TCGA_RNA-Seq B3GNT5-CAMK2N2 B3GNT5 chr3 182971260 + CAMK2N2 chr3 183978015 - Exonic hg19 LUSC TCGA-56-5898 11 22 5'UTR-CDS Intra-chr q27.1 q27.1 Seq+ 35774 ChimerSeq STARFusion TCGA_RNA-Seq MSN-HTR3D MSN chrX 64887720 + HTR3D chr3 183755809 + Exonic hg19 LUSC TCGA-56-5898 3 35 In-Frame Inter-chr q12 q27.1 Seq+ 35775 ChimerSeq STARFusion TCGA_RNA-Seq ABCC5-ATP11B ABCC5 chr3 183705558 - ATP11B chr3 182538048 + Exonic hg19 LUSC TCGA-56-5898 7 16 In-Frame Intra-chr q27.1 q26.33 Oncogene Seq+ 35776 ChimerSeq STARFusion TCGA_RNA-Seq ABCC5-DCUN1D1 ABCC5 chr3 183705558 - DCUN1D1 chr3 182662961 - Exonic hg19 LUSC TCGA-56-5898 3 23 Out-of-frame Intra-chr q27.1 q26.33 Oncogene Seq+ 35777 ChimerSeq STARFusion TCGA_RNA-Seq B3GNT5-PVT1 B3GNT5 chr3 182971260 + PVT1 chr8 128902835 + Exonic hg19 LUSC TCGA-56-5898 3 14 5'UTR-5'UTR Inter-chr q27.1 q24.21 35778 ChimerSeq STARFusion TCGA_RNA-Seq UHRF1BP1-OSBPL1A UHRF1BP1 chr6 34760071 + OSBPL1A chr18 21957499 - Exonic hg19 LUSC TCGA-56-5898 4 4 CDS-5'UTR Inter-chr p21.31 q11.2 Seq+ 35779 ChimerSeq STARFusion TCGA_RNA-Seq ATP11B-PCAT1 ATP11B chr3 182511574 + PCAT1 chr8 127889917 + Exonic hg19 LUSC TCGA-56-5898 4 3 CDS-5'UTR Inter-chr q26.33 Oncogene q24.21 35780 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-PARL PVT1 chr8 128806980 + PARL chr3 183585848 - Exonic hg19 LUSC TCGA-56-5898 2 9 5'UTR-CDS Inter-chr q24.21 q27.1 35781 ChimerSeq STARFusion TCGA_RNA-Seq SFTPC-KCNJ15 SFTPC chr8 22020718 + KCNJ15 chr21 39676842 + Exonic hg19 LUSC TCGA-22-5491 8 2 Out-of-frame Inter-chr p21.3 q22.13 35782 ChimerSeq STARFusion TCGA_RNA-Seq HIRA-IGHGP HIRA chr22 19344505 - IGHGP chr14 106136183 - Exonic hg19 LUSC TCGA-22-5492 175 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 35783 ChimerSeq STARFusion TCGA_RNA-Seq ALOX15-RN7SL2 ALOX15 chr17 4534446 - RN7SL2 chr14 50329512 - Exonic hg19 LUSC TCGA-22-5492 9 249 Out-of-frame Inter-chr p13.2 Tumor suppressor gene q21.3 35784 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-IGHGP DHRSX chrX 2184830 - IGHGP chr14 106136184 - Exonic hg19 LUSC TCGA-22-5492 63 0 Out-of-frame Inter-chr p22.33 35785 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-NEURL IGL@ chr22 22764598 + NEURL chr10 105352301 + Exonic hg19 LUSC TCGA-22-5492 58 0 Out-of-frame Inter-chr q11.22 Tumor suppressor gene 35786 ChimerSeq STARFusion TCGA_RNA-Seq HIRA-IGHGP HIRA chr22 19344505 - IGHGP chr14 106209409 - Exonic hg19 LUSC TCGA-22-5492 50 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 35787 ChimerSeq STARFusion TCGA_RNA-Seq ACTR2-TSGA10 ACTR2 chr2 65455091 + TSGA10 chr2 99722160 - Exonic hg19 LUSC TCGA-22-5492 17 42 In-Frame Intra-chr p14 TKL:STKR q11.2 Seq+ 35788 ChimerSeq STARFusion TCGA_RNA-Seq ACTR2-TSGA10 ACTR2 chr2 65455091 + TSGA10 chr2 99688337 - Exonic hg19 LUSC TCGA-22-5492 2 41 Out-of-frame Intra-chr p14 TKL:STKR q11.2 Seq+ 35789 ChimerSeq STARFusion TCGA_RNA-Seq TLN2-IGL@ TLN2 chr15 62949992 + IGL@ chr22 23247168 + Exonic hg19 LUSC TCGA-22-5492 12 1 Out-of-frame Inter-chr q22.2 q11.22 35790 ChimerSeq STARFusion TCGA_RNA-Seq IQCG-IGHJ5 IQCG chr3 197685684 - IGHJ5 chr14 106330059 - Exonic hg19 LUSC TCGA-22-5492 10 0 Out-of-frame Inter-chr q29 35791 ChimerSeq STARFusion TCGA_RNA-Seq MTIF2-RPS27A MTIF2 chr2 55463769 - RPS27A chr2 55460499 + Exonic hg19 LUSC TCGA-22-5492 3 11 3'UTR-CDS Intra-chr p16.1 p16.1 35792 ChimerSeq STARFusion TCGA_RNA-Seq AGER-SFTPC AGER chr6 32148993 - SFTPC chr8 22019316 + Exonic hg19 LUSC TCGA-90-6837 3 23 Out-of-frame Inter-chr p21.3 35793 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 LUSC TCGA-94-A5I6 21 0 Out-of-frame Inter-chr q13.33 p21.1 35794 ChimerSeq STARFusion TCGA_RNA-Seq CPT1A-LPXN CPT1A chr11 68566686 - LPXN chr11 58338186 - Exonic hg19 LUSC TCGA-94-A5I6 2 9 Out-of-frame Intra-chr q13.3 q12.1 Seq+ 35795 ChimerSeq STARFusion TCGA_RNA-Seq METTL21B-RASSF3 METTL21B chr12 58166911 + RASSF3 chr12 65078567 + Exonic hg19 LUSC TCGA-43-2581 77 268 Out-of-frame Intra-chr q14.2 Tumor suppressor gene Seq+ 35796 ChimerSeq STARFusion TCGA_RNA-Seq METTL21B-RASSF3 METTL21B chr12 58166911 + RASSF3 chr12 65077736 + Exonic hg19 LUSC TCGA-43-2581 16 267 CDS-5'UTR Intra-chr q14.2 Tumor suppressor gene Seq+ 35797 ChimerSeq STARFusion TCGA_RNA-Seq METTL21B-RASSF3 METTL21B chr12 58166856 + RASSF3 chr12 65078567 + Exonic hg19 LUSC TCGA-43-2581 12 266 Out-of-frame Intra-chr q14.2 Tumor suppressor gene Seq+ 35798 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-UNC5B IGL@ chr22 23063622 + UNC5B chr10 73050829 + Exonic hg19 LUSC TCGA-43-2581 72 1 Out-of-frame Inter-chr q11.22 q22.1 Tumor suppressor gene 35799 ChimerSeq STARFusion TCGA_RNA-Seq UBALD2-TIMP2 UBALD2 chr17 74262050 + TIMP2 chr17 76870001 - Exonic hg19 LUSC TCGA-43-2581 28 120 Out-of-frame Intra-chr q25.1 q25.3 Seq+ 35800 ChimerSeq STARFusion TCGA_RNA-Seq UBALD2-DDC8 UBALD2 chr17 74262050 + DDC8 chr17 76870001 - Exonic hg19 LUSC TCGA-43-2581 28 117 Out-of-frame Intra-chr q25.1 35801 ChimerSeq STARFusion TCGA_RNA-Seq UBALD2-DDC8 UBALD2 chr17 74262050 + DDC8 chr17 76898008 - Exonic hg19 LUSC TCGA-43-2581 23 114 Out-of-frame Intra-chr q25.1 35802 ChimerSeq STARFusion TCGA_RNA-Seq UBALD2-TIMP2 UBALD2 chr17 74262050 + TIMP2 chr17 76898008 - Exonic hg19 LUSC TCGA-43-2581 20 120 Out-of-frame Intra-chr q25.1 q25.3 Seq+ 35803 ChimerSeq STARFusion TCGA_RNA-Seq NMT1-NME1 NMT1 chr17 43138828 + NME1 chr17 49233012 + Exonic hg19 LUSC TCGA-43-2581 8 83 In-Frame Intra-chr q21.31 q21.33 Tumor suppressor gene Seq+ 35804 ChimerSeq STARFusion TCGA_RNA-Seq NMT1-NME2 NMT1 chr17 43138828 + NME2 chr17 49233012 + Exonic hg19 LUSC TCGA-43-2581 8 83 CDS-5'UTR Intra-chr q21.31 q21.33 Transcription factor 35805 ChimerSeq STARFusion TCGA_RNA-Seq MSI2-ARL17B MSI2 chr17 55339553 + ARL17B chr17 44352784 - Exonic hg19 LUSC TCGA-43-2581 4 41 CDS-3'UTR Intra-chr q22 Seq+ 35806 ChimerSeq STARFusion TCGA_RNA-Seq UNK-AVIL UNK chr17 73781065 + AVIL chr12 58209842 - Exonic hg19 LUSC TCGA-43-2581 5 31 5'UTR-5'UTR Inter-chr q25.1 q14.1 Seq+ 35807 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-PRKCA TANC2 chr17 61151375 + PRKCA chr17 64683229 + Exonic hg19 LUSC TCGA-43-2581 7 20 In-Frame Intra-chr q23.2 q24.2 Seq+ 35808 ChimerSeq STARFusion TCGA_RNA-Seq DGKE-EPN3 DGKE chr17 54912620 + EPN3 chr17 48618154 + Exonic hg19 LUSC TCGA-43-2581 3 21 Out-of-frame Intra-chr q22 q21.33 Seq+ 35809 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2-LINC00623 NOTCH2 chr1 120478095 - LINC00623 chr1 144284857 - Exonic hg19 LUSC TCGA-85-8481 10 63 Out-of-frame Intra-chr p12 Oncogene Tumor suppressor gene p11.2 35810 ChimerSeq STARFusion TCGA_RNA-Seq ABHD17B-TMEM2 ABHD17B chr9 74525550 - TMEM2 chr9 74365301 - Exonic hg19 LUSC TCGA-85-8481 4 14 Out-of-frame Intra-chr q21.13 q21.13 35811 ChimerSeq STARFusion TCGA_RNA-Seq FLNA-IGL@ FLNA chrX 153581233 - IGL@ chr22 23241800 + Exonic hg19 LUSC TCGA-85-8481 4 4 Out-of-frame Inter-chr q28 Tumor suppressor gene q11.22 35812 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGH@ TET3 chr2 74329257 + IGH@ chr14 106209409 - Exonic hg19 LUSC TCGA-66-2763 21 1 Out-of-frame Inter-chr p13.1 Transcription factor 32.33 35813 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGH@ TET3 chr2 74329257 + IGH@ chr14 106136183 - Exonic hg19 LUSC TCGA-66-2763 18 1 Out-of-frame Inter-chr p13.1 Transcription factor 32.33 35814 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGH@ TET3 chr2 74329257 + IGH@ chr14 106237744 - Exonic hg19 LUSC TCGA-66-2763 17 1 Out-of-frame Inter-chr p13.1 Transcription factor 32.33 35815 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSD1 PRSS27 chr16 2763530 - TPSD1 chr16 1308333 + Exonic hg19 LUSC TCGA-66-2763 11 5 In-Frame Intra-chr p13.3 p13.3 35816 ChimerSeq STARFusion TCGA_RNA-Seq GPS1-IGH@ GPS1 chr17 80012786 + IGH@ chr14 106209410 - Exonic hg19 LUSC TCGA-66-2763 11 1 Out-of-frame Inter-chr q25.3 32.33 35817 ChimerSeq STARFusion TCGA_RNA-Seq GPS1-IGHG1 GPS1 chr17 80012786 + IGHG1 chr14 106209410 - Exonic hg19 LUSC TCGA-66-2763 11 1 Out-of-frame Inter-chr q25.3 q32.33 35818 ChimerSeq STARFusion TCGA_RNA-Seq DCAF5-ERH DCAF5 chr14 69556665 - ERH chr14 69861629 - Exonic hg19 LUSC TCGA-66-2763 3 26 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 35819 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ZBTB7C IGH@ chr14 107034730 - ZBTB7C chr18 45566495 - Exonic hg19 LUSC TCGA-66-2763 9 1 Out-of-frame Inter-chr 32.33 q21.1 Tumor suppressor gene Transcription factor 35820 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGH@ TET3 chr2 74329257 + IGH@ chr14 106092404 - Exonic hg19 LUSC TCGA-66-2763 9 1 Out-of-frame Inter-chr p13.1 Transcription factor 32.33 35821 ChimerSeq STARFusion TCGA_RNA-Seq CLOCK-TMEM165 CLOCK chr4 56315563 - TMEM165 chr4 56318406 + Exonic hg19 LUSC TCGA-66-2763 3 17 CDS-3'UTR Intra-chr q12 Transcription factor q12 35822 ChimerSeq STARFusion TCGA_RNA-Seq ITPRIPL2-RN7SL2 ITPRIPL2 chr16 19131490 + RN7SL2 chr14 50329500 - Exonic hg19 LUSC TCGA-66-2763 3 13 Out-of-frame Inter-chr p12.3 q21.3 35823 ChimerSeq STARFusion TCGA_RNA-Seq GMPS-C3orf55 GMPS chr3 155588686 + C3orf55 chr3 157271019 + Exonic hg19 LUSC TCGA-66-2766 117 826 CDS-5'UTR Intra-chr q25.31 Seq+ 35824 ChimerSeq STARFusion TCGA_RNA-Seq RRP12-EXOSC1 RRP12 chr10 99160062 - EXOSC1 chr10 99197507 - Exonic hg19 LUSC TCGA-66-2766 20 133 In-Frame Intra-chr q24.1 q24.1 Seq+ 35825 ChimerSeq STARFusion TCGA_RNA-Seq TPD52L1-RNF217 TPD52L1 chr6 125550412 + RNF217 chr6 125379088 + Exonic hg19 LUSC TCGA-66-2766 6 16 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 35826 ChimerSeq STARFusion TCGA_RNA-Seq SFMBT2-AKR1C4 SFMBT2 chr10 7409611 - AKR1C4 chr10 5237428 + Exonic hg19 LUSC TCGA-66-2766 3 26 CDS-5'UTR Intra-chr p14 p15.1 Seq+ 35827 ChimerSeq STARFusion TCGA_RNA-Seq ESCO1-LAMA3 ESCO1 chr18 19140820 - LAMA3 chr18 21353461 + Exonic hg19 LUSC TCGA-66-2766 3 12 In-Frame Intra-chr q11.2 q11.2 Seq+ 35828 ChimerSeq STARFusion TCGA_RNA-Seq LINC00704-NRP1 LINC00704 chr10 4720241 - NRP1 chr10 33515217 - Exonic hg19 LUSC TCGA-66-2766 2 13 Out-of-frame Intra-chr p15.1 p11.22 35829 ChimerSeq STARFusion TCGA_RNA-Seq NFATC3-SLC7A6 NFATC3 chr16 68217269 + SLC7A6 chr16 68328608 + Exonic hg19 LUSC TCGA-66-2766 3 5 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 35830 ChimerSeq STARFusion TCGA_RNA-Seq ABTB1-IGKC ABTB1 chr3 127392358 + IGKC chr2 89160435 - Exonic hg19 LUSC TCGA-66-2767 22 1 Out-of-frame Inter-chr q21.3 p11.2 35831 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-MTATP6P1 IGH@ chr14 106109701 - MTATP6P1 chr1 569021 + Exonic hg19 LUSC TCGA-66-2767 3 69 Out-of-frame Inter-chr 32.33 p36.33 35832 ChimerSeq STARFusion TCGA_RNA-Seq CTBP1-IGHG3 CTBP1 chr4 1229383 - IGHG3 chr14 106329456 - Exonic hg19 LUSC TCGA-66-2767 15 1 Out-of-frame Inter-chr p16.3 35833 ChimerSeq STARFusion TCGA_RNA-Seq CTBP1-IGHJ6 CTBP1 chr4 1229383 - IGHJ6 chr14 106329456 - Exonic hg19 LUSC TCGA-66-2767 15 0 Out-of-frame Inter-chr p16.3 Seq+ 35834 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGHG1 INTS1 chr7 1511981 - IGHG1 chr14 106209410 - Exonic hg19 LUSC TCGA-66-2767 13 1 Out-of-frame Inter-chr p22.3 q32.33 35835 ChimerSeq STARFusion TCGA_RNA-Seq IGHG2-MTATP6P1 IGHG2 chr14 106109701 - MTATP6P1 chr1 569021 + Exonic hg19 LUSC TCGA-66-2767 3 20 Out-of-frame Inter-chr p36.33 35836 ChimerSeq STARFusion TCGA_RNA-Seq IGHA1-MTND2P28 IGHA1 chr14 106174467 - MTND2P28 chr1 565899 + Exonic hg19 LUSC TCGA-66-2767 3 6 Out-of-frame Inter-chr p36.33 35837 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-FAM65B WASF2 chr1 27755271 - FAM65B chr6 24876045 - Exonic hg19 LUSC TCGA-66-2765 26 59 CDS-5'UTR Inter-chr p36.11 Seq+ 35838 ChimerSeq STARFusion TCGA_RNA-Seq CCAR2-FGFR2 CCAR2 chr8 22462355 + FGFR2 chr10 123239627 - Exonic hg19 LUSC TCGA-66-2765 13 28 Out-of-frame Inter-chr p21.3 Tumor suppressor gene q26.13 TK:FGFR Oncogene Seq+ 35839 ChimerSeq STARFusion TCGA_RNA-Seq FGFR2-CCAR2 FGFR2 chr10 123243212 - CCAR2 chr8 22464120 + Exonic hg19 LUSC TCGA-66-2765 6 49 Out-of-frame Inter-chr q26.13 TK:FGFR Oncogene p21.3 Tumor suppressor gene Seq+ 35840 ChimerSeq STARFusion TCGA_RNA-Seq CCAR2-FGFR2 CCAR2 chr8 22462355 + FGFR2 chr10 123239535 - Exonic hg19 LUSC TCGA-66-2765 8 28 Out-of-frame Inter-chr p21.3 Tumor suppressor gene q26.13 TK:FGFR Oncogene Seq+ 35841 ChimerSeq STARFusion TCGA_RNA-Seq ACTG1-KRT17 ACTG1 chr17 79477953 - KRT17 chr17 39779284 - Exonic hg19 LUSC TCGA-66-2765 2 8 In-Frame Intra-chr q25.3 q21.2 35842 ChimerSeq STARFusion TCGA_RNA-Seq TUBD1-PTRH2 TUBD1 chr17 57963444 - PTRH2 chr17 57775339 - Exonic hg19 LUSC TCGA-66-2768 4 20 5'UTR-5'UTR Intra-chr q23.1 q23.1 Seq+ 35843 ChimerSeq STARFusion TCGA_RNA-Seq DIAPH1-CYSTM1 DIAPH1 chr5 140998365 - CYSTM1 chr5 139622890 + Exonic hg19 LUSC TCGA-66-2768 5 12 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 35844 ChimerSeq STARFusion TCGA_RNA-Seq TUBD1-PTRH2 TUBD1 chr17 57958255 - PTRH2 chr17 57775339 - Exonic hg19 LUSC TCGA-66-2768 3 20 CDS-5'UTR Intra-chr q23.1 q23.1 Seq+ 35845 ChimerSeq STARFusion TCGA_RNA-Seq ACAT2-IGHG2 ACAT2 chr6 160183157 + IGHG2 chr14 106111128 - Exonic hg19 LUSC TCGA-66-2769 16 1 Out-of-frame Inter-chr q25.3 35846 ChimerSeq STARFusion TCGA_RNA-Seq ABR-GAS7 ABR chr17 1082961 - GAS7 chr17 9923214 - Exonic hg19 LUSC TCGA-66-2769 11 15 Out-of-frame Intra-chr p13.3 p13.1 Seq+ 35847 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-SMARCC1 MAP4 chr3 47896738 - SMARCC1 chr3 47628033 - Exonic hg19 LUSC TCGA-66-2769 3 20 CDS-3'UTR Intra-chr p21.31 p21.31 Tumor suppressor gene 35848 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57733388 + VMP1 chr17 57915656 + Exonic hg19 LUSC TCGA-66-2769 4 14 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 35849 ChimerSeq STARFusion TCGA_RNA-Seq SCRN1-WDR53 SCRN1 chr7 30029258 - WDR53 chr3 196281678 - Exonic hg19 LUSC TCGA-66-2769 2 12 5'UTR-CDS Inter-chr p14.3 q29 Seq+ 35850 ChimerSeq STARFusion TCGA_RNA-Seq TRIM62-AK2 TRIM62 chr1 33623854 - AK2 chr1 33490168 - Exonic hg19 LUSC TCGA-66-2769 2 8 Out-of-frame Intra-chr p35.1 Tumor suppressor gene p35.1 35851 ChimerSeq STARFusion TCGA_RNA-Seq SRPK2-LRP5 SRPK2 chr7 105029095 - LRP5 chr11 68213904 + Exonic hg19 LUSC TCGA-85-8352 25 81 Out-of-frame Inter-chr q22.3 CMGC:SRPK q13.2 Seq+ 35852 ChimerSeq STARFusion TCGA_RNA-Seq SHB-SLC22A20 SHB chr9 37974619 - SLC22A20 chr11 65009461 + Exonic hg19 LUSC TCGA-85-8352 12 46 CDS-5'UTR Inter-chr p13.1 q13.1 Seq+ 35853 ChimerSeq STARFusion TCGA_RNA-Seq ATP9A-WASH6P ATP9A chr20 50329505 - WASH6P chrX 155251664 + Exonic hg19 LUSC TCGA-85-8352 4 9 Out-of-frame Inter-chr q13.2 q28 35854 ChimerSeq STARFusion TCGA_RNA-Seq ATP9A-WASH6P ATP9A chr20 50329505 - WASH6P chrY 59354670 + Exonic hg19 LUSC TCGA-85-8352 4 9 Out-of-frame Inter-chr q13.2 q28 35855 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-SH3BGRL ZBTB20 chr3 114519948 - SH3BGRL chrX 80532483 + Exonic hg19 LUSC TCGA-85-8352 2 5 5'UTR-CDS Inter-chr q13.31 Transcription factor q21.1 Seq+ 35856 ChimerSeq STARFusion TCGA_RNA-Seq TYMS-YES1 TYMS chr18 662320 + YES1 chr18 732965 - Exonic hg19 LUSC TCGA-85-8353 28 167 3'UTR-CDS Intra-chr p11.32 p11.32 Seq+ 35857 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-PPP5D1 IGL@ chr22 23154774 + PPP5D1 chr19 47104304 - Exonic hg19 LUSC TCGA-85-8353 32 0 Out-of-frame Inter-chr q11.22 q13.32 35858 ChimerSeq STARFusion TCGA_RNA-Seq TJAP1-ABCC10 TJAP1 chr6 43446456 + ABCC10 chr6 43409600 + Exonic hg19 LUSC TCGA-85-8353 6 27 5'UTR-CDS Intra-chr p21.1 p21.1 Seq+ 35859 ChimerSeq STARFusion TCGA_RNA-Seq TJAP1-ABCC10 TJAP1 chr6 43445970 + ABCC10 chr6 43409600 + Exonic hg19 LUSC TCGA-85-8353 5 25 5'UTR-CDS Intra-chr p21.1 p21.1 Seq+ 35860 ChimerSeq STARFusion TCGA_RNA-Seq NRBP1-IGHG1 NRBP1 chr2 27664675 + IGHG1 chr14 106209409 - Exonic hg19 LUSC TCGA-85-8353 10 1 Out-of-frame Inter-chr p23.3 Other:NRBP Tumor suppressor gene q32.33 35861 ChimerSeq STARFusion TCGA_RNA-Seq TJAP1-ABCC10 TJAP1 chr6 43445366 + ABCC10 chr6 43411671 + Exonic hg19 LUSC TCGA-85-8353 2 25 5'UTR-CDS Intra-chr p21.1 p21.1 Seq+ 35862 ChimerSeq STARFusion TCGA_RNA-Seq HSD17B12-ALKBH3 HSD17B12 chr11 43775671 + ALKBH3 chr11 43940588 + Exonic hg19 LUSC TCGA-85-8350 31 110 Out-of-frame Intra-chr p11.2 p11.2 35863 ChimerSeq STARFusion TCGA_RNA-Seq HSD17B12-ALKBH3 HSD17B12 chr11 43772507 + ALKBH3 chr11 43940588 + Exonic hg19 LUSC TCGA-85-8350 4 107 In-Frame Intra-chr p11.2 p11.2 35864 ChimerSeq STARFusion TCGA_RNA-Seq ATP2C2-IGH@ ATP2C2 chr16 84444201 + IGH@ chr14 106175004 - Exonic hg19 LUSC TCGA-85-8350 11 1 Out-of-frame Inter-chr q24.1 32.33 35865 ChimerSeq STARFusion TCGA_RNA-Seq CHD6-IGL@ CHD6 chr20 40080537 - IGL@ chr22 23247173 + Exonic hg19 LUSC TCGA-85-8350 10 1 Out-of-frame Inter-chr q12 q11.22 35866 ChimerSeq STARFusion TCGA_RNA-Seq CHD6-IGLC3 CHD6 chr20 40080537 - IGLC3 chr22 23247173 + Exonic hg19 LUSC TCGA-85-8350 10 1 Out-of-frame Inter-chr q12 q11.22 35867 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB2-IGKC DNAJB2 chr2 220151425 + IGKC chr2 89156807 - Exonic hg19 LUSC TCGA-85-8350 6 1 Out-of-frame Intra-chr q35 p11.2 35868 ChimerSeq STARFusion TCGA_RNA-Seq COMMD1-B3GNT2 COMMD1 chr2 62132993 + B3GNT2 chr2 62449347 + Exonic hg19 LUSC TCGA-85-8350 4 3 CDS-5'UTR Intra-chr p15 p15 35869 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-SEC61G EGFR chr7 55087058 + SEC61G chr7 54825287 - Exonic hg19 LUSC TCGA-85-8351 53 321 CDS-5'UTR Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 35870 ChimerSeq STARFusion TCGA_RNA-Seq CCNI-MRPL1 CCNI chr4 77996625 - MRPL1 chr4 78870951 + Exonic hg19 LUSC TCGA-85-8351 12 107 5'UTR-CDS Intra-chr q21.1 q21.1 Seq+ 35871 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-TEAD2 EGFR chr7 55087058 + TEAD2 chr19 49862756 - Exonic hg19 LUSC TCGA-85-8351 10 20 In-Frame Inter-chr p11.2 TK:EGFR Oncogene q13.33 Transcription factor Seq+ 35872 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-FGGY EGFR chr7 55087058 + FGGY chr1 60073475 + Exonic hg19 LUSC TCGA-85-8351 3 23 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene p32.1 35873 ChimerSeq STARFusion TCGA_RNA-Seq FGGY-CASC11 FGGY chr1 59922748 + CASC11 chr8 128701668 - Exonic hg19 LUSC TCGA-85-8351 2 15 Out-of-frame Inter-chr p32.1 q24.21 Seq+ 35874 ChimerSeq STARFusion TCGA_RNA-Seq C17orf62-IGKC C17orf62 chr17 80403294 - IGKC chr2 89160428 - Exonic hg19 LUSC TCGA-34-7107 34 1 Out-of-frame Inter-chr q25.3 p11.2 35875 ChimerSeq STARFusion TCGA_RNA-Seq C17orf62-IGKC C17orf62 chr17 80403296 - IGKC chr2 89161430 - Exonic hg19 LUSC TCGA-34-7107 17 1 Out-of-frame Inter-chr q25.3 p11.2 35876 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LUSC TCGA-85-8052 5 3 In-Frame Intra-chr p13.3 p13.3 35877 ChimerSeq STARFusion TCGA_RNA-Seq EXOSC2-IGL@ EXOSC2 chr9 133578469 + IGL@ chr22 23247175 + Exonic hg19 LUSC TCGA-85-8052 5 1 Out-of-frame Inter-chr q34.12 q11.22 35878 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGH@ HOMER2 chr15 83561493 - IGH@ chr14 106054734 - Exonic hg19 LUSC TCGA-34-8455 5 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene 32.33 35879 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-CDC25A MAP4 chr3 48019355 - CDC25A chr3 48209434 - Exonic hg19 LUSC TCGA-34-8454 4 20 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 35880 ChimerSeq STARFusion TCGA_RNA-Seq NFIX-DNM2 NFIX chr19 13106678 + DNM2 chr19 10897240 + Exonic hg19 LUSC TCGA-34-8456 5 5 In-Frame Intra-chr p13.13 Transcription factor p13.2 Seq+ 35881 ChimerSeq STARFusion TCGA_RNA-Seq TULP3-GGNBP2 TULP3 chr12 3043727 + GGNBP2 chr17 34937774 + Exonic hg19 LUSC TCGA-34-8456 3 6 In-Frame Inter-chr p13.33 Tumor suppressor gene Seq+ 35882 ChimerSeq STARFusion TCGA_RNA-Seq TTC7B-LINC00617 TTC7B chr14 91282519 - LINC00617 chr14 96389118 + Exonic hg19 LUSC TCGA-34-8456 2 3 Out-of-frame Intra-chr q32.11 35883 ChimerSeq STARFusion TCGA_RNA-Seq VOPP1-HS3ST2 VOPP1 chr7 55559975 - HS3ST2 chr16 22926265 + Exonic hg19 LUSC TCGA-85-7843 20 117 Out-of-frame Inter-chr p11.2 p12.2 Seq+ 35884 ChimerSeq STARFusion TCGA_RNA-Seq MND1-KIAA0922 MND1 chr4 154318485 + KIAA0922 chr4 154547299 + Exonic hg19 LUSC TCGA-85-7843 15 59 In-Frame Intra-chr q31.3 q31.3 35885 ChimerSeq STARFusion TCGA_RNA-Seq VOPP1-HS3ST2 VOPP1 chr7 55559975 - HS3ST2 chr16 22865985 + Exonic hg19 LUSC TCGA-85-7843 14 60 Out-of-frame Inter-chr p11.2 p12.2 Seq+ 35886 ChimerSeq STARFusion TCGA_RNA-Seq RASSF7-DEAF1 RASSF7 chr11 561033 + DEAF1 chr11 654051 - Exonic hg19 LUSC TCGA-85-7843 13 18 5'UTR-CDS Intra-chr p15.5 Transcription factor Seq+ 35887 ChimerSeq STARFusion TCGA_RNA-Seq MED29-ADAM18 MED29 chr19 39884277 + ADAM18 chr8 39550119 + Exonic hg19 LUSC TCGA-85-7843 4 40 In-Frame Inter-chr q13.2 Seq+ 35888 ChimerSeq STARFusion TCGA_RNA-Seq DOCK11-IL13RA1 DOCK11 chrX 117630036 + IL13RA1 chrX 117874980 + Exonic hg19 LUSC TCGA-85-7843 7 4 Out-of-frame Intra-chr q24 q24 Seq+ 35889 ChimerSeq STARFusion TCGA_RNA-Seq RBX1-EIF4A1 RBX1 chr22 41363888 + EIF4A1 chr17 7481545 + Exonic hg19 LUSC TCGA-85-A4CN 6 19 Out-of-frame Inter-chr q13.2 p13.1 Seq+ 35890 ChimerSeq STARFusion TCGA_RNA-Seq XPNPEP3-EIF4A1 XPNPEP3 chr22 41363888 + EIF4A1 chr17 7481545 + Exonic hg19 LUSC TCGA-85-A4CN 6 16 3'UTR-CDS Inter-chr q13.2 p13.1 35891 ChimerSeq STARFusion TCGA_RNA-Seq NPLOC4-PDE6G NPLOC4 chr17 79567367 - PDE6G chr17 79618715 - Exonic hg19 LUSC TCGA-85-A4CN 6 13 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 35892 ChimerSeq STARFusion TCGA_RNA-Seq CRK-STX8 CRK chr17 1359171 - STX8 chr17 9153962 - Exonic hg19 LUSC TCGA-85-A4CN 5 14 In-Frame Intra-chr p13.3 p13.1 Seq+ 35893 ChimerSeq STARFusion TCGA_RNA-Seq RAB9A-EGFL6 RAB9A chrX 13707407 + EGFL6 chrX 13635849 + Exonic hg19 LUSC TCGA-33-6738 12 29 5'UTR-CDS Intra-chr p22.2 p22.2 Seq+ 35894 ChimerSeq STARFusion TCGA_RNA-Seq LSM1-WHSC1L1 LSM1 chr8 38033793 - WHSC1L1 chr8 38196125 - Exonic hg19 LUSC TCGA-33-6738 5 21 Out-of-frame Intra-chr p11.23 p11.23 Tumor suppressor gene Seq+ 35895 ChimerSeq STARFusion TCGA_RNA-Seq THEM4-SPRR2C THEM4 chr1 151881836 - SPRR2C chr1 153113204 - Exonic hg19 LUSC TCGA-33-6738 3 6 CDS-3'UTR Intra-chr q21.3 q21.3 35896 ChimerSeq STARFusion TCGA_RNA-Seq ERGIC1-RANBP17 ERGIC1 chr5 172341841 + RANBP17 chr5 170720887 + Exonic hg19 LUSC TCGA-33-6738 2 6 In-Frame Intra-chr q35.1 q35.1 Seq+ 35897 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57760440 + VMP1 chr17 57919076 + Exonic hg19 LUSC TCGA-56-8201 3 50 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 35898 ChimerSeq STARFusion TCGA_RNA-Seq PIGU-ACSS2 PIGU chr20 33225680 - ACSS2 chr20 33500899 + Exonic hg19 LUSC TCGA-56-8201 5 16 In-Frame Intra-chr q11.22 q11.22 Seq+ 35899 ChimerSeq STARFusion TCGA_RNA-Seq DHX40-TUBD1 DHX40 chr17 57665414 + TUBD1 chr17 57963591 - Exonic hg19 LUSC TCGA-56-8201 5 7 In-Frame Intra-chr q23.1 q23.1 Seq+ 35900 ChimerSeq STARFusion TCGA_RNA-Seq HECTD4-BRAP HECTD4 chr12 112600087 - BRAP chr12 112080496 - Exonic hg19 LUSC TCGA-63-6202 12 54 Out-of-frame Intra-chr q24.13 q24.12 Seq+ 35901 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB40-TCEA3 ZBTB40 chr1 22778497 + TCEA3 chr1 23724448 - Exonic hg19 LUSC TCGA-63-6202 5 58 5'UTR-CDS Intra-chr p36.12 Transcription factor Seq+ 35902 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB40-TCEA3 ZBTB40 chr1 22778497 + TCEA3 chr1 23735219 - Exonic hg19 LUSC TCGA-63-6202 3 56 5'UTR-CDS Intra-chr p36.12 Transcription factor Seq+ 35903 ChimerSeq STARFusion TCGA_RNA-Seq BAZ1A-RNF115 BAZ1A chr14 35343698 - RNF115 chr1 145646115 + Exonic hg19 LUSC TCGA-63-6202 7 31 Out-of-frame Inter-chr q13.2 q21.1 Seq+ 35904 ChimerSeq STARFusion TCGA_RNA-Seq NAV2-USB1 NAV2 chr11 20142993 + USB1 chr16 58054472 + Exonic hg19 LUSC TCGA-63-6202 9 0 Out-of-frame Inter-chr p15.1 q21 35905 ChimerSeq STARFusion TCGA_RNA-Seq AMDHD2-IGL@ AMDHD2 chr16 2580523 + IGL@ chr22 23247175 + Exonic hg19 LUSC TCGA-21-5784 8 0 Out-of-frame Inter-chr p13.3 q11.22 35906 ChimerSeq STARFusion TCGA_RNA-Seq AMDHD2-IGLJ3 AMDHD2 chr16 2580523 + IGLJ3 chr22 23247175 + Exonic hg19 LUSC TCGA-21-5784 8 0 Out-of-frame Inter-chr p13.3 q11.22 35907 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSD1 PRSS27 chr16 2763530 - TPSD1 chr16 1308333 + Exonic hg19 LUSC TCGA-21-5784 5 3 In-Frame Intra-chr p13.3 p13.3 35908 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-PRSS33 CREBBP chr16 3929833 - PRSS33 chr16 2836122 - Exonic hg19 LUSC TCGA-33-4587 23 150 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 35909 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-PRSS33 CREBBP chr16 3929833 - PRSS33 chr16 2836605 - Exonic hg19 LUSC TCGA-33-4587 9 150 CDS-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 35910 ChimerSeq STARFusion TCGA_RNA-Seq MACF1-INPP5B MACF1 chr1 39920769 + INPP5B chr1 38352676 - Exonic hg19 LUSC TCGA-33-4587 16 109 In-Frame Intra-chr p34.3 p34.3 Seq+ 35911 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-PRSS33 CREBBP chr16 3929833 - PRSS33 chr16 2835172 - Exonic hg19 LUSC TCGA-33-4587 5 150 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 35912 ChimerSeq STARFusion TCGA_RNA-Seq MACF1-RHBDL2 MACF1 chr1 39571389 + RHBDL2 chr1 39385009 - Exonic hg19 LUSC TCGA-33-4587 3 48 CDS-5'UTR Intra-chr p34.3 p34.3 Seq+ 35913 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-TCEB2 CREBBP chr16 3929833 - TCEB2 chr16 2827128 - Exonic hg19 LUSC TCGA-33-4587 5 29 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene Seq+ 35914 ChimerSeq STARFusion TCGA_RNA-Seq IGF2BP3-PRKCA IGF2BP3 chr7 23381683 - PRKCA chr17 64637473 + Exonic hg19 LUSC TCGA-33-4587 5 29 In-Frame Inter-chr p15.3 q24.2 Seq+ 35915 ChimerSeq STARFusion TCGA_RNA-Seq NCOA6-PIGU NCOA6 chr20 33324494 - PIGU chr20 33176411 - Exonic hg19 LUSC TCGA-33-4587 6 17 Out-of-frame Intra-chr q11.22 q11.22 35916 ChimerSeq STARFusion TCGA_RNA-Seq CDKAL1-ASH1L CDKAL1 chr6 20846409 + ASH1L chr1 155349907 - Exonic hg19 LUSC TCGA-33-4587 5 20 In-Frame Inter-chr p22.3 q22 Transcription factor Seq+ 35917 ChimerSeq STARFusion TCGA_RNA-Seq FBXO42-C19orf26 FBXO42 chr1 16582206 - C19orf26 chr19 1231274 - Exonic hg19 LUSC TCGA-33-4587 6 16 Out-of-frame Inter-chr p36.13 Seq+ 35918 ChimerSeq STARFusion TCGA_RNA-Seq PRKCA-IGF2BP3 PRKCA chr17 64492401 + IGF2BP3 chr7 23358873 - Exonic hg19 LUSC TCGA-33-4587 3 19 In-Frame Inter-chr q24.2 p15.3 Seq+ 35919 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ADD1 IGH@ chr14 106518394 - ADD1 chr4 2877706 + Exonic hg19 LUSC TCGA-21-5786 32 2 Out-of-frame Inter-chr 32.33 p16.3 35920 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHG1 SLC7A5 chr16 87868137 - IGHG1 chr14 106209410 - Exonic hg19 LUSC TCGA-21-5786 14 2 Out-of-frame Inter-chr q24.2 q32.33 35921 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHG1 SLC7A5 chr16 87868137 - IGHG1 chr14 106237745 - Exonic hg19 LUSC TCGA-21-5786 12 2 Out-of-frame Inter-chr q24.2 q32.33 35922 ChimerSeq STARFusion TCGA_RNA-Seq TMEM127-ZAP70 TMEM127 chr2 96919588 - ZAP70 chr2 98349346 + Exonic hg19 LUSC TCGA-21-5786 4 16 CDS-3'UTR Intra-chr q11.2 Tumor suppressor gene q11.2 TK:Syk Seq+ 35923 ChimerSeq STARFusion TCGA_RNA-Seq DPY19L1-CDKAL1 DPY19L1 chr7 35029496 - CDKAL1 chr6 21198252 + Exonic hg19 LUSC TCGA-21-5787 6 31 In-Frame Inter-chr p14.2 p22.3 Seq+ 35924 ChimerSeq STARFusion TCGA_RNA-Seq UBE2E2-FAM179B UBE2E2 chr3 23258803 + FAM179B chr14 45512889 + Exonic hg19 LUSC TCGA-21-5787 6 9 In-Frame Inter-chr p24.3 Seq+ 35925 ChimerSeq STARFusion TCGA_RNA-Seq WWOX-IGH@ WWOX chr16 78466527 + IGH@ chr14 106209408 - Exonic hg19 LUSC TCGA-21-5787 8 1 Out-of-frame Inter-chr q23.1 Tumor suppressor gene 32.33 35926 ChimerSeq STARFusion TCGA_RNA-Seq XRCC6-NEAT1 XRCC6 chr22 42060083 + NEAT1 chr11 65205840 + Exonic hg19 LUSC TCGA-33-4582 23 84 Out-of-frame Inter-chr q13.2 q13.1 35927 ChimerSeq STARFusion TCGA_RNA-Seq PRKDC-PRIM2 PRKDC chr8 48824970 - PRIM2 chr6 57244699 + Exonic hg19 LUSC TCGA-33-4582 10 60 In-Frame Inter-chr q11.21 Oncogene p11.2 Seq+ 35928 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-TRAP1 CREBBP chr16 3929833 - TRAP1 chr16 3740986 - Exonic hg19 LUSC TCGA-33-4582 11 48 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 35929 ChimerSeq STARFusion TCGA_RNA-Seq TLDC1-CYBA TLDC1 chr16 84516198 - CYBA chr16 88709979 - Exonic hg19 LUSC TCGA-33-4582 11 37 Out-of-frame Intra-chr q24.1 q24.2 Seq+ 35930 ChimerSeq STARFusion TCGA_RNA-Seq LEMD3-MSRB3 LEMD3 chr12 65609823 + MSRB3 chr12 65720606 + Exonic hg19 LUSC TCGA-33-4582 3 9 In-Frame Intra-chr q14.3 q14.3 35931 ChimerSeq STARFusion TCGA_RNA-Seq STK38-PXT1 STK38 chr6 36483115 - PXT1 chr6 36359651 - Exonic hg19 LUSC TCGA-33-4582 3 8 In-Frame Intra-chr p21.31 p21.31 Seq+ 35932 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC1-SKIDA1 DNAJC1 chr10 22207708 - SKIDA1 chr10 21812800 - Exonic hg19 LUSC TCGA-33-4583 2 7 Out-of-frame Intra-chr p12.31 p12.31 Seq+ 35933 ChimerSeq STARFusion TCGA_RNA-Seq GCN1L1-RPLP0 GCN1L1 chr12 120568450 - RPLP0 chr12 120635265 - Exonic hg19 LUSC TCGA-21-5782 14 43 In-Frame Intra-chr q24.23 Seq+ 35934 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-VIM IGH@ chr14 106691673 - VIM chr10 17270959 + Exonic hg19 LUSC TCGA-21-5782 6 1 Out-of-frame Inter-chr 32.33 p13 Tumor suppressor gene 35935 ChimerSeq STARFusion TCGA_RNA-Seq SAMD12-TG SAMD12 chr8 119592954 - TG chr8 133923622 + Exonic hg19 LUSC TCGA-21-5783 16 57 In-Frame Intra-chr q24.12 q24.22 Seq+ 35936 ChimerSeq STARFusion TCGA_RNA-Seq GALNT7-SAP30 GALNT7 chr4 174090112 + SAP30 chr4 174294541 + Exonic hg19 LUSC TCGA-21-5783 14 41 In-Frame Intra-chr q34.1 q34.1 Seq+ 35937 ChimerSeq STARFusion TCGA_RNA-Seq SAMD12-TG SAMD12 chr8 119592954 - TG chr8 133925292 + Exonic hg19 LUSC TCGA-21-5783 2 57 Out-of-frame Intra-chr q24.12 q24.22 Seq+ 35938 ChimerSeq STARFusion TCGA_RNA-Seq USP15-MON2 USP15 chr12 62654284 + MON2 chr12 62877950 + Exonic hg19 LUSC TCGA-21-5783 2 13 Out-of-frame Intra-chr q14.1 q14.1 35939 ChimerSeq STARFusion TCGA_RNA-Seq ANO1-FGF3 ANO1 chr11 69972301 + FGF3 chr11 69631191 - Exonic hg19 LUSC TCGA-56-8083 14 122 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 35940 ChimerSeq STARFusion TCGA_RNA-Seq UGP2-PLEKHM3 UGP2 chr2 64085070 + PLEKHM3 chr2 208795843 - Exonic hg19 LUSC TCGA-56-8083 11 33 In-Frame Intra-chr p15 q33.3 Seq+ 35941 ChimerSeq STARFusion TCGA_RNA-Seq USP34-ZNF2 USP34 chr2 61449754 - ZNF2 chr2 95841933 + Exonic hg19 LUSC TCGA-56-8083 2 62 CDS-5'UTR Intra-chr p15 q11.1 Transcription factor Seq+ 35942 ChimerSeq STARFusion TCGA_RNA-Seq ANKIB1-LMTK2 ANKIB1 chr7 91981956 + LMTK2 chr7 97814363 + Exonic hg19 LUSC TCGA-56-8083 5 19 In-Frame Intra-chr q21.2 q21.3 Seq+ 35943 ChimerSeq STARFusion TCGA_RNA-Seq ELOVL5-TDRD6 ELOVL5 chr6 53213615 - TDRD6 chr6 46649264 + Exonic hg19 LUSC TCGA-33-4589 5 13 5'UTR-5'UTR Intra-chr p12.1 p12.3 35944 ChimerSeq STARFusion TCGA_RNA-Seq HAP1-TMSB10 HAP1 chr17 39877796 - TMSB10 chr2 85132808 + Exonic hg19 LUSC TCGA-33-4589 6 1 Out-of-frame Inter-chr q21.2 p11.2 35945 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-IGHG2 DHRSX chrY 2134830 - IGHG2 chr14 106111129 - Exonic hg19 LUSC TCGA-18-3419 67 1 Out-of-frame Inter-chr p22.33 35946 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-IGHG2 DHRSX chrY 2134830 - IGHG2 chr14 106136184 - Exonic hg19 LUSC TCGA-18-3419 59 1 Out-of-frame Inter-chr p22.33 35947 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-S100A9 IGH@ chr14 106091233 - S100A9 chr1 153333303 + Exonic hg19 LUSC TCGA-18-3419 3 170 Out-of-frame Inter-chr 32.33 q21.3 35948 ChimerSeq STARFusion TCGA_RNA-Seq COL1A1-IGKC COL1A1 chr17 48277498 - IGKC chr2 89160434 - Exonic hg19 LUSC TCGA-18-3419 36 4 Out-of-frame Inter-chr q21.33 Oncogene p11.2 35949 ChimerSeq STARFusion TCGA_RNA-Seq SAFB-IGKC SAFB chr19 5650000 + IGKC chr2 89160766 - Exonic hg19 LUSC TCGA-18-3419 30 1 Out-of-frame Inter-chr p13.3 Tumor suppressor gene Transcription factor p11.2 35950 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-S100A9 IGHG1 chr14 106208230 - S100A9 chr1 153333303 + Exonic hg19 LUSC TCGA-18-3419 3 85 Out-of-frame Inter-chr q32.33 q21.3 35951 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-IGHG2 DHRSX chrX 2184830 - IGHG2 chr14 106111129 - Exonic hg19 LUSC TCGA-18-3419 10 1 Out-of-frame Inter-chr p22.33 35952 ChimerSeq STARFusion TCGA_RNA-Seq RICTOR-FYB RICTOR chr5 39074213 - FYB chr5 39141243 - Exonic hg19 LUSC TCGA-18-3419 6 13 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 35953 ChimerSeq STARFusion TCGA_RNA-Seq DYNLL2-IGL@ DYNLL2 chr17 56167036 + IGL@ chr22 23047119 + Exonic hg19 LUSC TCGA-18-3419 8 2 Out-of-frame Inter-chr q22 q11.22 35954 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-IGHG2 DHRSX chrX 2184830 - IGHG2 chr14 106136184 - Exonic hg19 LUSC TCGA-18-3419 7 1 Out-of-frame Inter-chr p22.33 35955 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-IGHG2 DHRSX chrY 2134830 - IGHG2 chr14 106209410 - Exonic hg19 LUSC TCGA-18-3419 7 1 Out-of-frame Inter-chr p22.33 35956 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-IGHG2 DHRSX chrX 2184830 - IGHG2 chr14 106209410 - Exonic hg19 LUSC TCGA-18-3419 7 1 Out-of-frame Inter-chr p22.33 35957 ChimerSeq STARFusion TCGA_RNA-Seq RAB3GAP1-CCNT2 RAB3GAP1 chr2 135815656 + CCNT2 chr2 135694411 + Exonic hg19 LUSC TCGA-18-3419 3 14 In-Frame Intra-chr q21.3 q21.3 Seq+ 35958 ChimerSeq STARFusion TCGA_RNA-Seq GPATCH2-IGH@ GPATCH2 chr1 217804376 - IGH@ chr14 106994307 - Exonic hg19 LUSC TCGA-18-3419 6 1 Out-of-frame Inter-chr q41 32.33 35959 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ZNF200 IGH@ chr14 106134592 - ZNF200 chr16 3274753 - Exonic hg19 LUSC TCGA-18-3419 6 1 Out-of-frame Inter-chr 32.33 p13.3 Transcription factor 35960 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB2-IGKC DNAJB2 chr2 220151425 + IGKC chr2 89156807 - Exonic hg19 LUSC TCGA-18-3419 5 3 Out-of-frame Intra-chr q35 p11.2 35961 ChimerSeq STARFusion TCGA_RNA-Seq BNIP3-IGKC BNIP3 chr10 133783456 - IGKC chr2 89160766 - Exonic hg19 LUSC TCGA-18-3419 5 1 Out-of-frame Inter-chr q26.3 p11.2 35962 ChimerSeq STARFusion TCGA_RNA-Seq GGT7-IGH@ GGT7 chr20 33451183 - IGH@ chr14 106237744 - Exonic hg19 LUSC TCGA-18-3419 5 1 Out-of-frame Inter-chr q11.22 32.33 35963 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-H2AFZ IGH@ chr14 106993812 - H2AFZ chr4 100870542 - Exonic hg19 LUSC TCGA-18-3419 4 4 Out-of-frame Inter-chr 32.33 q23 35964 ChimerSeq STARFusion TCGA_RNA-Seq SLC44A2-IGH@ SLC44A2 chr19 10742336 + IGH@ chr14 106330066 - Exonic hg19 LUSC TCGA-18-3419 4 2 Out-of-frame Inter-chr p13.2 32.33 35965 ChimerSeq STARFusion TCGA_RNA-Seq SLC44A2-IGHG3 SLC44A2 chr19 10742336 + IGHG3 chr14 106330066 - Exonic hg19 LUSC TCGA-18-3419 4 2 Out-of-frame Inter-chr p13.2 35966 ChimerSeq STARFusion TCGA_RNA-Seq LRBA-SH3D19 LRBA chr4 151935579 - SH3D19 chr4 152060999 - Exonic hg19 LUSC TCGA-60-2719 25 61 In-Frame Intra-chr q31.3 q31.3 KB Seq+ 35967 ChimerSeq STARFusion TCGA_RNA-Seq UBE2R2-PRSS3 UBE2R2 chr9 33817932 + PRSS3 chr9 33796641 + Exonic hg19 LUSC TCGA-60-2719 8 9 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 35968 ChimerSeq STARFusion TCGA_RNA-Seq PELP1-CHRNE PELP1 chr17 4579652 - CHRNE chr17 4806058 - Exonic hg19 LUSC TCGA-60-2719 2 11 In-Frame Intra-chr p13.2 p13.2 Seq+ 35969 ChimerSeq STARFusion TCGA_RNA-Seq PEX13-CHMP3 PEX13 chr2 61244986 + CHMP3 chr2 86737602 - Exonic hg19 LUSC TCGA-60-2715 118 614 Out-of-frame Intra-chr p15 p11.2 Seq+ 35970 ChimerSeq STARFusion TCGA_RNA-Seq PEX13-CHMP3 PEX13 chr2 61245009 + CHMP3 chr2 86737602 - Exonic hg19 LUSC TCGA-60-2715 15 614 CDS-3'UTR Intra-chr p15 p11.2 Seq+ 35971 ChimerSeq STARFusion TCGA_RNA-Seq SNX33P1-IGH@ SNX33P1 chr19 16147332 - IGH@ chr14 106237742 - Exonic hg19 LUSC TCGA-60-2715 136 0 Out-of-frame Inter-chr p13.12 32.33 35972 ChimerSeq STARFusion TCGA_RNA-Seq SNX33P1-IGHG3 SNX33P1 chr19 16147332 - IGHG3 chr14 106237742 - Exonic hg19 LUSC TCGA-60-2715 136 0 Out-of-frame Inter-chr p13.12 35973 ChimerSeq STARFusion TCGA_RNA-Seq CCAT1-CASC8 CCAT1 chr8 128231055 - CASC8 chr8 128302305 - Exonic hg19 LUSC TCGA-60-2715 25 200 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 35974 ChimerSeq STARFusion TCGA_RNA-Seq CCAT1-CASC8 CCAT1 chr8 128231055 - CASC8 chr8 128335399 - Exonic hg19 LUSC TCGA-60-2715 17 197 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 35975 ChimerSeq STARFusion TCGA_RNA-Seq CDKN2A-SRGAP2 CDKN2A chr9 21994138 - SRGAP2 chr1 206634382 + Exonic hg19 LUSC TCGA-60-2715 21 114 Out-of-frame Inter-chr p21.3 Oncogene Tumor suppressor gene q32.1 Tumor suppressor gene Seq+ 35976 ChimerSeq STARFusion TCGA_RNA-Seq CDKN2A-SRGAP2 CDKN2A chr9 21974677 - SRGAP2 chr1 206634382 + Exonic hg19 LUSC TCGA-60-2715 12 114 In-Frame Inter-chr p21.3 Oncogene Tumor suppressor gene q32.1 Tumor suppressor gene Seq+ 35977 ChimerSeq STARFusion TCGA_RNA-Seq MSL1-SHANK2 MSL1 chr17 38279633 + SHANK2 chr11 70742672 - Exonic hg19 LUSC TCGA-60-2715 13 42 5'UTR-5'UTR Inter-chr q21.1 q13.4 Seq+ 35978 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-ZSCAN32 CREBBP chr16 3832685 - ZSCAN32 chr16 3440517 - Exonic hg19 LUSC TCGA-60-2715 4 58 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Transcription factor 35979 ChimerSeq STARFusion TCGA_RNA-Seq NID1-IGKC NID1 chr1 236140174 - IGKC chr2 89160436 - Exonic hg19 LUSC TCGA-60-2715 17 1 Out-of-frame Inter-chr q42.3 p11.2 35980 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-ZSCAN32 CREBBP chr16 3832685 - ZSCAN32 chr16 3434941 - Exonic hg19 LUSC TCGA-60-2715 2 58 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Transcription factor 35981 ChimerSeq STARFusion TCGA_RNA-Seq MAGI1-IGH@ MAGI1 chr3 65364966 - IGH@ chr14 106209407 - Exonic hg19 LUSC TCGA-60-2715 13 1 Out-of-frame Inter-chr Oncogene 32.33 35982 ChimerSeq STARFusion TCGA_RNA-Seq MAGI1-IGH@ MAGI1 chr3 65364967 - IGH@ chr14 106237743 - Exonic hg19 LUSC TCGA-60-2715 12 1 Out-of-frame Inter-chr Oncogene 32.33 35983 ChimerSeq STARFusion TCGA_RNA-Seq MAGI1-IGH@ MAGI1 chr3 65364966 - IGH@ chr14 106111126 - Exonic hg19 LUSC TCGA-60-2715 11 1 Out-of-frame Inter-chr Oncogene 32.33 35984 ChimerSeq STARFusion TCGA_RNA-Seq KATNBL1-EMC7 KATNBL1 chr15 34502152 - EMC7 chr15 34388215 - Exonic hg19 LUSC TCGA-60-2715 2 32 Out-of-frame Intra-chr q14 q14 Seq+ 35985 ChimerSeq STARFusion TCGA_RNA-Seq MAGI1-IGH@ MAGI1 chr3 65364966 - IGH@ chr14 106092402 - Exonic hg19 LUSC TCGA-60-2715 9 1 Out-of-frame Inter-chr Oncogene 32.33 35986 ChimerSeq STARFusion TCGA_RNA-Seq RBBP8-ANXA4 RBBP8 chr18 20529676 + ANXA4 chr2 70008652 + Exonic hg19 LUSC TCGA-60-2715 3 16 CDS-5'UTR Inter-chr q11.2 Tumor suppressor gene p13.3 Seq+ 35987 ChimerSeq STARFusion TCGA_RNA-Seq FOXN2-SPTBN1 FOXN2 chr2 48573890 + SPTBN1 chr2 54849437 + Exonic hg19 LUSC TCGA-60-2715 3 10 In-Frame Intra-chr p16.3 Transcription factor p16.2 Tumor suppressor gene Seq+ 35988 ChimerSeq STARFusion TCGA_RNA-Seq LRP10-MSL1 LRP10 chr14 23346262 + MSL1 chr17 38282436 + Exonic hg19 LUSC TCGA-60-2715 2 11 CDS-5'UTR Inter-chr q11.2 q21.1 Seq+ 35989 ChimerSeq STARFusion TCGA_RNA-Seq CS-IGL@ CS chr12 56669959 - IGL@ chr22 23162121 + Exonic hg19 LUSC TCGA-60-2714 30 1 Out-of-frame Inter-chr q13.3 q11.22 35990 ChimerSeq STARFusion TCGA_RNA-Seq SRGAP2B-DDX11L16 SRGAP2B chr1 144014093 + DDX11L16 chrX 155257109 - Exonic hg19 LUSC TCGA-60-2714 17 26 Out-of-frame Inter-chr q21.1 q28 35991 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-HCN1 CREBBP chr16 3900298 - HCN1 chr5 45645710 - Exonic hg19 LUSC TCGA-60-2714 4 64 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene p12 Seq+ 35992 ChimerSeq STARFusion TCGA_RNA-Seq RPS14-IGL@ RPS14 chr5 149829233 - IGL@ chr22 23241806 + Exonic hg19 LUSC TCGA-60-2714 15 2 Out-of-frame Inter-chr q33.1 q11.22 35993 ChimerSeq STARFusion TCGA_RNA-Seq RPS14-IGLC3 RPS14 chr5 149829233 - IGLC3 chr22 23241806 + Exonic hg19 LUSC TCGA-60-2714 15 1 Out-of-frame Inter-chr q33.1 q11.22 35994 ChimerSeq STARFusion TCGA_RNA-Seq IQGAP1-CRTC3 IQGAP1 chr15 90969498 + CRTC3 chr15 91083271 + Exonic hg19 LUSC TCGA-60-2714 5 15 In-Frame Intra-chr q26.1 q26.1 35995 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-TLR9 IGH@ chr14 106518398 - TLR9 chr3 52259704 - Exonic hg19 LUSC TCGA-60-2714 8 1 Out-of-frame Inter-chr 32.33 p21.2 35996 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-COL1A2 IGH@ chr14 107083254 - COL1A2 chr7 94054375 + Exonic hg19 LUSC TCGA-60-2714 3 18 Out-of-frame Inter-chr 32.33 q21.3 35997 ChimerSeq STARFusion TCGA_RNA-Seq SERINC2-ZCCHC17 SERINC2 chr1 31886151 + ZCCHC17 chr1 31836695 + Exonic hg19 LUSC TCGA-33-4566 17 18 Out-of-frame Intra-chr p35.2 p35.2 Seq+ 35998 ChimerSeq STARFusion TCGA_RNA-Seq LITAF-CXCL17 LITAF chr16 11681007 - CXCL17 chr19 42938008 - Exonic hg19 LUSC TCGA-33-4566 5 11 5'UTR-CDS Inter-chr p13.13 Tumor suppressor gene q13.2 Seq+ 35999 ChimerSeq STARFusion TCGA_RNA-Seq LITAF-CXCL17 LITAF chr16 11680742 - CXCL17 chr19 42938008 - Exonic hg19 LUSC TCGA-33-4566 3 11 5'UTR-CDS Inter-chr p13.13 Tumor suppressor gene q13.2 Seq+ 36000 ChimerSeq STARFusion TCGA_RNA-Seq ANXA2-RPL10 ANXA2 chr15 60690142 - RPL10 chrX 153626838 + Exonic hg19 LUSC TCGA-33-4566 2 1 5'UTR-5'UTR Inter-chr q22.2 q28 Tumor suppressor gene Seq+ 36001 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-NUTM1 WHSC1L1 chr8 38184248 - NUTM1 chr15 34640170 + Exonic hg19 LUSC TCGA-60-2716 48 176 Out-of-frame Inter-chr p11.23 Tumor suppressor gene q14 Seq+ 36002 ChimerSeq STARFusion TCGA_RNA-Seq RABEP1-RPAIN RABEP1 chr17 5212117 + RPAIN chr17 5324616 + Exonic hg19 LUSC TCGA-60-2711 11 30 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 36003 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-DGCR2 IGH@ chr14 106361497 - DGCR2 chr22 19026634 - Exonic hg19 LUSC TCGA-60-2711 10 2 Out-of-frame Inter-chr 32.33 q11.21 36004 ChimerSeq STARFusion TCGA_RNA-Seq MB21D2-FGF12 MB21D2 chr3 192635419 - FGF12 chr3 192078327 - Exonic hg19 LUSC TCGA-60-2711 3 15 In-Frame Intra-chr q29 q29 36005 ChimerSeq STARFusion TCGA_RNA-Seq PPM1L-B3GNT5 PPM1L chr3 160474495 + B3GNT5 chr3 183005393 + Exonic hg19 LUSC TCGA-60-2711 3 15 CDS-3'UTR Intra-chr q25.33 Tumor suppressor gene q27.1 Seq+ 36006 ChimerSeq STARFusion TCGA_RNA-Seq UGDH-SMIM14 UGDH chr4 39522971 - SMIM14 chr4 39574083 - Exonic hg19 LUSC TCGA-60-2710 7 34 Out-of-frame Intra-chr p14 p14 36007 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CTBP2 IGH@ chr14 107169927 - CTBP2 chr10 126715771 - Exonic hg19 LUSC TCGA-60-2710 12 2 Out-of-frame Inter-chr 32.33 q26.13 36008 ChimerSeq STARFusion TCGA_RNA-Seq TRPC6-IGHG3 TRPC6 chr11 101362322 - IGHG3 chr14 106237740 - Exonic hg19 LUSC TCGA-60-2710 9 0 Out-of-frame Inter-chr q22.1 36009 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-PTK2 AGO2 chr8 141645584 - PTK2 chr8 141685598 - Exonic hg19 LUSC TCGA-60-2713 32 43 Out-of-frame Intra-chr q24.3 q24.3 36010 ChimerSeq STARFusion TCGA_RNA-Seq ELMO1-IGH@ ELMO1 chr7 37025574 - IGH@ chr14 107170239 - Exonic hg19 LUSC TCGA-60-2713 25 1 Out-of-frame Inter-chr p14.1 32.33 36011 ChimerSeq STARFusion TCGA_RNA-Seq STAU1-IGKC STAU1 chr20 47733653 - IGKC chr2 89160435 - Exonic hg19 LUSC TCGA-60-2713 11 1 Out-of-frame Inter-chr q13.13 p11.2 36012 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-YY1 IGH@ chr14 106091234 - YY1 chr14 100746197 + Exonic hg19 LUSC TCGA-60-2713 10 1 Out-of-frame Intra-chr 32.33 q32.2 Transcription factor 36013 ChimerSeq STARFusion TCGA_RNA-Seq IGHG4-YY1 IGHG4 chr14 106091234 - YY1 chr14 100746197 + Exonic hg19 LUSC TCGA-60-2713 10 1 Out-of-frame Intra-chr q32.2 Transcription factor 36014 ChimerSeq STARFusion TCGA_RNA-Seq GTF2E1-RABL3 GTF2E1 chr3 120495511 + RABL3 chr3 120449634 - Exonic hg19 LUSC TCGA-60-2713 4 10 In-Frame Intra-chr q13.33 q13.33 36015 ChimerSeq STARFusion TCGA_RNA-Seq RPRD2-PRPF3 RPRD2 chr1 150337395 + PRPF3 chr1 150321633 + Exonic hg19 LUSC TCGA-60-2713 2 16 In-Frame Intra-chr q21.2 q21.2 36016 ChimerSeq STARFusion TCGA_RNA-Seq FAM101B-IGHG3 FAM101B chr17 291155 - IGHG3 chr14 106330472 - Exonic hg19 LUSC TCGA-60-2712 91 0 Out-of-frame Inter-chr 36017 ChimerSeq STARFusion TCGA_RNA-Seq FAM101B-IGHJ4 FAM101B chr17 291155 - IGHJ4 chr14 106330472 - Exonic hg19 LUSC TCGA-60-2712 91 0 Out-of-frame Inter-chr 36018 ChimerSeq STARFusion TCGA_RNA-Seq BEX4-IGHG3 BEX4 chrX 102470107 + IGHG3 chr14 106330065 - Exonic hg19 LUSC TCGA-60-2712 19 1 Out-of-frame Inter-chr q22.1 36019 ChimerSeq STARFusion TCGA_RNA-Seq HSPG2-IGHJ4 HSPG2 chr1 22181129 - IGHJ4 chr14 106330469 - Exonic hg19 LUSC TCGA-60-2712 14 1 Out-of-frame Inter-chr p36.12 36020 ChimerSeq STARFusion TCGA_RNA-Seq C14orf159-IGHG3 C14orf159 chr14 91666110 + IGHG3 chr14 106331650 - Exonic hg19 LUSC TCGA-60-2712 12 2 Out-of-frame Intra-chr q32.11 36021 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L3-IGHJ4 SIPA1L3 chr19 38423331 + IGHJ4 chr14 106330467 - Exonic hg19 LUSC TCGA-60-2712 8 1 Out-of-frame Inter-chr q13.13 36022 ChimerSeq STARFusion TCGA_RNA-Seq IGHA1-MTND4P12 IGHA1 chr14 106174437 - MTND4P12 chr5 134262461 - Exonic hg19 LUSC TCGA-60-2712 3 8 Out-of-frame Inter-chr q31.1 36023 ChimerSeq STARFusion TCGA_RNA-Seq TFEB-MDFI TFEB chr6 41703088 - MDFI chr6 41617357 + Exonic hg19 LUSC TCGA-56-A5DR 2 34 5'UTR-CDS Intra-chr p21.1 Transcription factor p21.1 Seq+ 36024 ChimerSeq STARFusion TCGA_RNA-Seq SREBF2-RNF214 SREBF2 chr22 42281015 + RNF214 chr11 117150624 + Exonic hg19 LUSC TCGA-56-A5DR 2 14 Out-of-frame Inter-chr q13.2 Transcription factor q23.3 Seq+ 36025 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-PBRM1 IGH@ chr14 106552284 - PBRM1 chr3 52719810 - Exonic hg19 LUSC TCGA-37-4141 14 1 Out-of-frame Inter-chr 32.33 p21.1 Oncogene Tumor suppressor gene 36026 ChimerSeq STARFusion TCGA_RNA-Seq FBRS-ZNF689 FBRS chr16 30674180 + ZNF689 chr16 30635190 - Exonic hg19 LUSC TCGA-58-8390 3 9 Out-of-frame Intra-chr p11.2 p11.2 Transcription factor Seq+ 36027 ChimerSeq STARFusion TCGA_RNA-Seq MFSD2A-SLC5A9 MFSD2A chr1 40424497 + SLC5A9 chr1 48703351 + Exonic hg19 LUSC TCGA-58-8392 6 16 In-Frame Intra-chr p34.2 Tumor suppressor gene p33 Seq+ 36028 ChimerSeq STARFusion TCGA_RNA-Seq CYP4X1-CMPK1 CYP4X1 chr1 47515711 + CMPK1 chr1 47838627 + Exonic hg19 LUSC TCGA-58-8392 3 18 Out-of-frame Intra-chr p33 p33 Oncogene 36029 ChimerSeq STARFusion TCGA_RNA-Seq SUPT5H-IGH@ SUPT5H chr19 39936257 + IGH@ chr14 106329463 - Exonic hg19 LUSC TCGA-58-8392 7 2 Out-of-frame Inter-chr q13.2 32.33 36030 ChimerSeq STARFusion TCGA_RNA-Seq SUPT5H-IGHD SUPT5H chr19 39936257 + IGHD chr14 106329463 - Exonic hg19 LUSC TCGA-58-8392 7 1 Out-of-frame Inter-chr q13.2 36031 ChimerSeq STARFusion TCGA_RNA-Seq ANXA2-RORA ANXA2 chr15 60674541 - RORA chr15 60824050 - Exonic hg19 LUSC TCGA-58-8393 84 250 In-Frame Intra-chr q22.2 q22.2 Transcription factor Seq+ 36032 ChimerSeq STARFusion TCGA_RNA-Seq ARMC7-HN1 ARMC7 chr17 73106701 + HN1 chr17 73132345 - Exonic hg19 LUSC TCGA-39-5028 8 26 In-Frame Intra-chr q25.1 Seq+ 36033 ChimerSeq STARFusion TCGA_RNA-Seq ITPR1-IGHG1 ITPR1 chr3 4752023 + IGHG1 chr14 106209408 - Exonic hg19 LUSC TCGA-39-5028 8 1 Out-of-frame Inter-chr p26.1 q32.33 36034 ChimerSeq STARFusion TCGA_RNA-Seq ABCA1-ZBTB6 ABCA1 chr9 107645320 - ZBTB6 chr9 125674360 - Exonic hg19 LUSC TCGA-39-5028 3 7 CDS-5'UTR Intra-chr q31.1 q33.2 Transcription factor Seq+ 36035 ChimerSeq STARFusion TCGA_RNA-Seq MYBL1-IGKC MYBL1 chr8 67526432 - IGKC chr2 89161076 - Exonic hg19 LUSC TCGA-39-5029 108 0 Out-of-frame Inter-chr q13.1 Transcription factor p11.2 36036 ChimerSeq STARFusion TCGA_RNA-Seq MYBL1-IGKJ2 MYBL1 chr8 67526429 - IGKJ2 chr2 89161073 - Exonic hg19 LUSC TCGA-39-5029 108 0 Out-of-frame Inter-chr q13.1 Transcription factor p11.2 36037 ChimerSeq STARFusion TCGA_RNA-Seq IGHGP-TINAGL1 IGHGP chr14 106134591 - TINAGL1 chr1 32052503 + Exonic hg19 LUSC TCGA-39-5029 50 1 Out-of-frame Inter-chr p35.2 36038 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGH@ HOMER2 chr15 83561493 - IGH@ chr14 106209410 - Exonic hg19 LUSC TCGA-39-5029 49 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene 32.33 36039 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGHG1 HOMER2 chr15 83561493 - IGHG1 chr14 106209410 - Exonic hg19 LUSC TCGA-39-5029 49 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene q32.33 36040 ChimerSeq STARFusion TCGA_RNA-Seq B3GNT4-IGHG1 B3GNT4 chr12 122691085 + IGHG1 chr14 106209410 - Exonic hg19 LUSC TCGA-39-5029 47 2 Out-of-frame Inter-chr q24.31 q32.33 36041 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGH@ HOMER2 chr15 83561493 - IGH@ chr14 106136184 - Exonic hg19 LUSC TCGA-39-5029 40 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene 32.33 36042 ChimerSeq STARFusion TCGA_RNA-Seq B3GNT4-IGHG1 B3GNT4 chr12 122691085 + IGHG1 chr14 106237745 - Exonic hg19 LUSC TCGA-39-5029 36 2 Out-of-frame Inter-chr q24.31 q32.33 36043 ChimerSeq STARFusion TCGA_RNA-Seq DLEU2-SPRYD7 DLEU2 chr13 50642233 - SPRYD7 chr13 50505270 - Exonic hg19 LUSC TCGA-39-5029 15 65 3'UTR-CDS Intra-chr q14.2 Tumor suppressor gene q14.2 36044 ChimerSeq STARFusion TCGA_RNA-Seq GPC4-IGH@ GPC4 chrX 132549021 - IGH@ chr14 106330466 - Exonic hg19 LUSC TCGA-39-5029 26 0 Out-of-frame Inter-chr q26.2 32.33 36045 ChimerSeq STARFusion TCGA_RNA-Seq GPC4-IGHG3 GPC4 chrX 132549021 - IGHG3 chr14 106330466 - Exonic hg19 LUSC TCGA-39-5029 26 0 Out-of-frame Inter-chr q26.2 36046 ChimerSeq STARFusion TCGA_RNA-Seq GPC4-IGHJ4 GPC4 chrX 132549021 - IGHJ4 chr14 106330466 - Exonic hg19 LUSC TCGA-39-5029 26 0 Out-of-frame Inter-chr q26.2 Seq+ 36047 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SAFB IGH@ chr14 106691675 - SAFB chr19 5667115 + Exonic hg19 LUSC TCGA-39-5029 25 3 Out-of-frame Inter-chr 32.33 p13.3 Tumor suppressor gene Transcription factor 36048 ChimerSeq STARFusion TCGA_RNA-Seq PDE4D-DEPDC1B PDE4D chr5 59783769 - DEPDC1B chr5 59943360 - Exonic hg19 LUSC TCGA-39-5029 10 54 5'UTR-CDS Intra-chr q12.1 q12.1 Seq+ 36049 ChimerSeq STARFusion TCGA_RNA-Seq DLEU2-SPRYD7 DLEU2 chr13 50642233 - SPRYD7 chr13 50502221 - Exonic hg19 LUSC TCGA-39-5029 3 54 3'UTR-CDS Intra-chr q14.2 Tumor suppressor gene q14.2 36050 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGHG1 HOMER2 chr15 83561493 - IGHG1 chr14 106237745 - Exonic hg19 LUSC TCGA-39-5029 11 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene q32.33 36051 ChimerSeq STARFusion TCGA_RNA-Seq DDHD2-IGL@ DDHD2 chr8 38119529 + IGL@ chr22 23247170 + Exonic hg19 LUSC TCGA-39-5029 9 2 Out-of-frame Inter-chr p11.23 q11.22 36052 ChimerSeq STARFusion TCGA_RNA-Seq DDHD2-IGLC3 DDHD2 chr8 38119529 + IGLC3 chr22 23247170 + Exonic hg19 LUSC TCGA-39-5029 8 1 Out-of-frame Inter-chr p11.23 q11.22 36053 ChimerSeq STARFusion TCGA_RNA-Seq IGHGP-NOTCH1 IGHGP chr14 106134591 - NOTCH1 chr9 139403429 - Exonic hg19 LUSC TCGA-39-5029 8 1 Out-of-frame Inter-chr q34.3 Oncogene Tumor suppressor gene Seq+ 36054 ChimerSeq STARFusion TCGA_RNA-Seq ENAH-AEBP2 ENAH chr1 225840388 - AEBP2 chr12 19615444 + Exonic hg19 LUSC TCGA-39-5029 3 14 In-Frame Inter-chr q42.12 p12.3 Transcription factor Seq+ 36055 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 LUSC TCGA-39-5024 359 1689 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 36056 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808651 + TACC3 chr4 1737484 + Exonic hg19 LUSC TCGA-39-5024 272 1629 Out-of-frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 36057 ChimerSeq STARFusion TCGA_RNA-Seq KIF1B-PEX14 KIF1B chr1 10316381 + PEX14 chr1 10659295 + Exonic hg19 LUSC TCGA-39-5024 4 26 Out-of-frame Intra-chr p36.22 Tumor suppressor gene p36.22 36058 ChimerSeq STARFusion TCGA_RNA-Seq MAPK8-PARG MAPK8 chr10 49514864 + PARG chr10 51093341 - Exonic hg19 LUSC TCGA-39-5027 5 16 5'UTR-CDS Intra-chr q11.22 Oncogene q11.23 Seq+ 36059 ChimerSeq STARFusion TCGA_RNA-Seq ALDOA-IGL@ ALDOA chr16 30066334 + IGL@ chr22 23235962 + Exonic hg19 LUSC TCGA-39-5021 6 7 Out-of-frame Inter-chr p11.2 q11.22 36060 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC11-IGL@ ZDHHC11 chr5 840688 - IGL@ chr22 23247168 + Exonic hg19 LUSC TCGA-39-5021 7 1 Out-of-frame Inter-chr p15.33 q11.22 36061 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC11-IGLC3 ZDHHC11 chr5 840688 - IGLC3 chr22 23247168 + Exonic hg19 LUSC TCGA-39-5021 7 1 Out-of-frame Inter-chr p15.33 q11.22 36062 ChimerSeq STARFusion TCGA_RNA-Seq CAPN1-IGH@ CAPN1 chr11 64956093 + IGH@ chr14 106330466 - Exonic hg19 LUSC TCGA-39-5021 6 3 Out-of-frame Inter-chr q13.1 32.33 36063 ChimerSeq STARFusion TCGA_RNA-Seq CAPN1-IGHG3 CAPN1 chr11 64956093 + IGHG3 chr14 106330466 - Exonic hg19 LUSC TCGA-39-5021 6 2 Out-of-frame Inter-chr q13.1 36064 ChimerSeq STARFusion TCGA_RNA-Seq ELMO1-IGH@ ELMO1 chr7 37025574 - IGH@ chr14 107170239 - Exonic hg19 LUSC TCGA-39-5021 5 1 Out-of-frame Inter-chr p14.1 32.33 36065 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ZNF200 IGH@ chr14 106134592 - ZNF200 chr16 3274753 - Exonic hg19 LUSC TCGA-39-5021 5 1 Out-of-frame Inter-chr 32.33 p13.3 Transcription factor 36066 ChimerSeq STARFusion TCGA_RNA-Seq YPEL3-IGHG3 YPEL3 chr16 30107345 - IGHG3 chr14 106330073 - Exonic hg19 LUSC TCGA-39-5022 124 1 Out-of-frame Inter-chr p11.2 Tumor suppressor gene 36067 ChimerSeq STARFusion TCGA_RNA-Seq ALDH18A1-IGKJ4 ALDH18A1 chr10 97366177 - IGKJ4 chr2 89160435 - Exonic hg19 LUSC TCGA-39-5022 66 1 Out-of-frame Inter-chr q24.1 p11.2 36068 ChimerSeq STARFusion TCGA_RNA-Seq MMP11-IGHG3 MMP11 chr22 24122691 + IGHG3 chr14 106331459 - Exonic hg19 LUSC TCGA-39-5022 22 1 Out-of-frame Inter-chr q11.23 36069 ChimerSeq STARFusion TCGA_RNA-Seq CPSF3L-IGLC3 CPSF3L chr1 1250352 - IGLC3 chr22 23247172 + Exonic hg19 LUSC TCGA-39-5022 20 1 Out-of-frame Inter-chr q11.22 36070 ChimerSeq STARFusion TCGA_RNA-Seq COASY-IGHA1 COASY chr17 40714608 + IGHA1 chr14 106175004 - Exonic hg19 LUSC TCGA-39-5022 20 0 Out-of-frame Inter-chr q21.2 36071 ChimerSeq STARFusion TCGA_RNA-Seq GOLIM4-RNF175 GOLIM4 chr3 167812887 - RNF175 chr4 154636814 - Exonic hg19 LUSC TCGA-52-7622 16 51 Out-of-frame Inter-chr q26.2 q31.3 Seq+ 36072 ChimerSeq STARFusion TCGA_RNA-Seq GOLIM4-RNF175 GOLIM4 chr3 167813691 - RNF175 chr4 154636814 - Exonic hg19 LUSC TCGA-52-7622 9 51 5'UTR-CDS Inter-chr q26.2 q31.3 Seq+ 36073 ChimerSeq STARFusion TCGA_RNA-Seq FXR1-KLHL24 FXR1 chr3 180675716 + KLHL24 chr3 183361268 + Exonic hg19 LUSC TCGA-52-7622 2 11 CDS-5'UTR Intra-chr q26.33 q27.1 Seq+ 36074 ChimerSeq STARFusion TCGA_RNA-Seq NUP160-TMEM50A NUP160 chr11 47800017 - TMEM50A chr1 25687324 + Exonic hg19 LUSC TCGA-52-7622 3 7 Out-of-frame Inter-chr p11.2 p36.11 36075 ChimerSeq STARFusion TCGA_RNA-Seq SYNE1-IGHG3 SYNE1 chr6 152647522 - IGHG3 chr14 106330841 - Exonic hg19 LUSC TCGA-43-6773 23 1 Out-of-frame Inter-chr q25.2 Oncogene 36076 ChimerSeq STARFusion TCGA_RNA-Seq PGAP2-IGHG2 PGAP2 chr11 3832574 + IGHG2 chr14 106111129 - Exonic hg19 LUSC TCGA-43-6773 15 1 Out-of-frame Inter-chr p15.4 36077 ChimerSeq STARFusion TCGA_RNA-Seq UCK2-IGLC1 UCK2 chr1 165872390 + IGLC1 chr22 23235964 + Exonic hg19 LUSC TCGA-43-6773 9 1 Out-of-frame Inter-chr q24.1 q11.22 36078 ChimerSeq STARFusion TCGA_RNA-Seq UCK2-IGLL5 UCK2 chr1 165872390 + IGLL5 chr22 23235964 + Exonic hg19 LUSC TCGA-43-6773 9 1 Out-of-frame Inter-chr q24.1 q11.22 36079 ChimerSeq STARFusion TCGA_RNA-Seq DDX3X-IGHG3 DDX3X chrX 41192874 + IGHG3 chr14 106330072 - Exonic hg19 LUSC TCGA-43-6773 7 1 Out-of-frame Inter-chr p11.4 Tumor suppressor gene 36080 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-IGHG3 NCOR2 chr12 124941665 - IGHG3 chr14 106330462 - Exonic hg19 LUSC TCGA-43-6773 7 1 Out-of-frame Inter-chr q24.31 36081 ChimerSeq STARFusion TCGA_RNA-Seq BAG6-IGLC3 BAG6 chr6 31609582 - IGLC3 chr22 23241805 + Exonic hg19 LUSC TCGA-43-6773 6 2 Out-of-frame Inter-chr p21.33 q11.22 36082 ChimerSeq STARFusion TCGA_RNA-Seq NUFIP1-FAAH NUFIP1 chr13 45533516 - FAAH chr1 46879119 + Exonic hg19 LUSC TCGA-85-A4JC 10 31 Out-of-frame Inter-chr q14.12 p33 Seq+ 36083 ChimerSeq STARFusion TCGA_RNA-Seq COG5-C7orf66 COG5 chr7 106938587 - C7orf66 chr7 108524641 - Exonic hg19 LUSC TCGA-85-A4JB 8 19 CDS-5'UTR Intra-chr q31.1 Seq+ 36084 ChimerSeq STARFusion TCGA_RNA-Seq PPIG-FAM117B PPIG chr2 170489757 + FAM117B chr2 203589640 + Exonic hg19 LUSC TCGA-85-A4JB 3 20 In-Frame Intra-chr q31.1 q33.2 Seq+ 36085 ChimerSeq STARFusion TCGA_RNA-Seq LUC7L3-SPATA20 LUC7L3 chr17 48797192 + SPATA20 chr17 48624429 + Exonic hg19 LUSC TCGA-21-A5DI 12 36 CDS-5'UTR Intra-chr q21.33 q21.33 Seq+ 36086 ChimerSeq STARFusion TCGA_RNA-Seq CERS6-NOSTRIN CERS6 chr2 169313128 + NOSTRIN chr2 169718470 + Exonic hg19 LUSC TCGA-66-2727 16 57 Out-of-frame Intra-chr q24.3 Seq+ 36087 ChimerSeq STARFusion TCGA_RNA-Seq CASP8-TTLL7 CASP8 chr2 202098835 + TTLL7 chr1 84335765 - Exonic hg19 LUSC TCGA-66-2727 9 76 5'UTR-CDS Inter-chr q33.1 Oncogene Tumor suppressor gene p31.1 Seq+ 36088 ChimerSeq STARFusion TCGA_RNA-Seq RCN2-IGL@ RCN2 chr15 77241803 + IGL@ chr22 23235966 + Exonic hg19 LUSC TCGA-66-2727 20 1 Out-of-frame Inter-chr q24.3 q11.22 36089 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 LUSC TCGA-66-2727 13 0 Out-of-frame Inter-chr q13.33 p21.1 36090 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-PPP1R7 IGL@ chr22 22786802 + PPP1R7 chr2 242122610 + Exonic hg19 LUSC TCGA-66-2727 12 1 Out-of-frame Inter-chr q11.22 q37.3 36091 ChimerSeq STARFusion TCGA_RNA-Seq UHRF1BP1-ANKS1A UHRF1BP1 chr6 34791125 + ANKS1A chr6 35021876 + Exonic hg19 LUSC TCGA-66-2727 3 14 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 36092 ChimerSeq STARFusion TCGA_RNA-Seq TCTA-DSCR3 TCTA chr3 49450073 + DSCR3 chr21 38612940 - Exonic hg19 LUSC TCGA-66-2727 4 6 Out-of-frame Inter-chr p21.31 q22.13 Seq+ 36093 ChimerSeq STARFusion TCGA_RNA-Seq TMEM260-MLIP TMEM260 chr14 57052630 + MLIP chr6 53986245 + Exonic hg19 LUSC TCGA-22-1017 26 116 Out-of-frame Inter-chr q22.3 p12.1 Seq+ 36094 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-ATG16L1 DGKD chr2 234263320 + ATG16L1 chr2 234164748 + Exonic hg19 LUSC TCGA-22-1017 3 15 Out-of-frame Intra-chr Seq+ 36095 ChimerSeq STARFusion TCGA_RNA-Seq GCN1L1-CCND2 GCN1L1 chr12 120600874 - CCND2 chr12 4398008 + Exonic hg19 LUSC TCGA-22-1017 4 10 In-Frame Intra-chr p13.32 Oncogene Seq+ 36096 ChimerSeq STARFusion TCGA_RNA-Seq YAP1-BIRC2 YAP1 chr11 102080295 + BIRC2 chr11 102248227 + Exonic hg19 LUSC TCGA-22-1016 8 48 CDS-5'UTR Intra-chr q22.1 Tumor suppressor gene q22.2 Oncogene Seq+ 36097 ChimerSeq STARFusion TCGA_RNA-Seq YAP1-BIRC2 YAP1 chr11 102080295 + BIRC2 chr11 102248410 + Exonic hg19 LUSC TCGA-22-1016 4 47 CDS-5'UTR Intra-chr q22.1 Tumor suppressor gene q22.2 Oncogene Seq+ 36098 ChimerSeq STARFusion TCGA_RNA-Seq SLC12A8-BCAS1 SLC12A8 chr3 124854513 - BCAS1 chr20 52591969 - Exonic hg19 LUSC TCGA-22-1016 8 20 Out-of-frame Inter-chr q21.2 q13.2 Seq+ 36099 ChimerSeq STARFusion TCGA_RNA-Seq USP7-CARHSP1 USP7 chr16 9057064 - CARHSP1 chr16 8953192 - Exonic hg19 LUSC TCGA-22-1016 6 20 CDS-5'UTR Intra-chr p13.2 p13.2 36100 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHG4B-AHRR PLEKHG4B chr5 145035 + AHRR chr5 344008 + Exonic hg19 LUSC TCGA-22-1016 2 20 Out-of-frame Intra-chr p15.33 p15.33 Tumor suppressor gene Transcription factor Seq+ 36101 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHG4B-PDCD6 PLEKHG4B chr5 145035 + PDCD6 chr5 344008 + Exonic hg19 LUSC TCGA-22-1016 2 20 CDS-3'UTR Intra-chr p15.33 p15.33 Seq+ 36102 ChimerSeq STARFusion TCGA_RNA-Seq NOP58-BMPR2 NOP58 chr2 203152447 + BMPR2 chr2 203329532 + Exonic hg19 LUSC TCGA-22-1016 3 13 CDS-3'UTR Intra-chr q33.1 q33.1 TKL:STKR Tumor suppressor gene Seq+ 36103 ChimerSeq STARFusion TCGA_RNA-Seq WNK1-ERC1 WNK1 chr12 863490 + ERC1 chr12 1136914 + Exonic hg19 LUSC TCGA-22-1016 4 6 CDS-5'UTR Intra-chr p13.33 Seq+ 36104 ChimerSeq STARFusion TCGA_RNA-Seq STAG1-MSL2 STAG1 chr3 136471037 - MSL2 chr3 135871580 - Exonic hg19 LUSC TCGA-22-1016 2 8 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 36105 ChimerSeq STARFusion TCGA_RNA-Seq DHCR7-IGL@ DHCR7 chr11 71149927 - IGL@ chr22 23237555 + Exonic hg19 LUSC TCGA-22-1011 114 1 Out-of-frame Inter-chr q13.4 q11.22 36106 ChimerSeq STARFusion TCGA_RNA-Seq TBX21-IGLJ2 TBX21 chr17 45823097 + IGLJ2 chr22 23241802 + Exonic hg19 LUSC TCGA-22-1011 34 0 Out-of-frame Inter-chr q21.32 Transcription factor q11.22 36107 ChimerSeq STARFusion TCGA_RNA-Seq TBX21-IGLC3 TBX21 chr17 45823097 + IGLC3 chr22 23247172 + Exonic hg19 LUSC TCGA-22-1011 33 0 Out-of-frame Inter-chr q21.32 Transcription factor q11.22 36108 ChimerSeq STARFusion TCGA_RNA-Seq ACAT2-IGHG4 ACAT2 chr6 160183157 + IGHG4 chr14 106111128 - Exonic hg19 LUSC TCGA-22-1011 12 1 Out-of-frame Inter-chr q25.3 36109 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG3 GAS6 chr13 114525072 - IGHG3 chr14 106237745 - Exonic hg19 LUSC TCGA-22-1011 10 1 Out-of-frame Inter-chr q34 Oncogene 36110 ChimerSeq STARFusion TCGA_RNA-Seq TBX21-IGLC3 TBX21 chr17 45823097 + IGLC3 chr22 23241802 + Exonic hg19 LUSC TCGA-22-1011 10 0 Out-of-frame Inter-chr q21.32 Transcription factor q11.22 36111 ChimerSeq STARFusion TCGA_RNA-Seq NRBP1-IGHG1 NRBP1 chr2 27664675 + IGHG1 chr14 106209409 - Exonic hg19 LUSC TCGA-22-1011 9 1 Out-of-frame Inter-chr p23.3 Other:NRBP Tumor suppressor gene q32.33 36112 ChimerSeq STARFusion TCGA_RNA-Seq ACAT2-IGHG4 ACAT2 chr6 160183157 + IGHG4 chr14 106136183 - Exonic hg19 LUSC TCGA-22-1011 7 1 Out-of-frame Inter-chr q25.3 36113 ChimerSeq STARFusion TCGA_RNA-Seq IGHG3-TINAGL1 IGHG3 chr14 106134590 - TINAGL1 chr1 32052504 + Exonic hg19 LUSC TCGA-22-1011 7 1 Out-of-frame Inter-chr p35.2 36114 ChimerSeq STARFusion TCGA_RNA-Seq RPS2-IGHG1 RPS2 chr16 2012589 - IGHG1 chr14 106209411 - Exonic hg19 LUSC TCGA-22-1011 3 5 Out-of-frame Inter-chr p13.3 q32.33 36115 ChimerSeq STARFusion TCGA_RNA-Seq NEURL-PDCD11 NEURL chr10 105254229 + PDCD11 chr10 105165742 + Exonic hg19 LUSC TCGA-22-1012 3 9 Out-of-frame Intra-chr Tumor suppressor gene q24.33 Seq+ 36116 ChimerSeq STARFusion TCGA_RNA-Seq TP63-TPRG1 TP63 chr3 189507631 + TPRG1 chr3 189038415 + Exonic hg19 LUSC TCGA-22-1012 2 8 In-Frame Intra-chr q28 Tumor suppressor gene Transcription factor q28 Seq+ 36117 ChimerSeq STARFusion TCGA_RNA-Seq DNPEP-TNKS DNPEP chr2 220251008 - TNKS chr8 9592375 + Exonic hg19 LUSC TCGA-85-7696 8 40 In-Frame Inter-chr q35 p23.1 Seq+ 36118 ChimerSeq STARFusion TCGA_RNA-Seq EIF3D-MYH9 EIF3D chr22 36925123 - MYH9 chr22 36682892 - Exonic hg19 LUSC TCGA-85-7696 4 40 5'UTR-CDS Intra-chr q12.3 q12.3 Oncogene Tumor suppressor gene Seq+ 36119 ChimerSeq STARFusion TCGA_RNA-Seq NOMO1-CSNK1A1 NOMO1 chr16 14989971 + CSNK1A1 chr5 148886696 - Exonic hg19 LUSC TCGA-85-7696 7 17 3'UTR-CDS Inter-chr q32 Tumor suppressor gene Seq+ 36120 ChimerSeq STARFusion TCGA_RNA-Seq IL1RAP-TP63 IL1RAP chr3 190232008 + TP63 chr3 189526061 + Exonic hg19 LUSC TCGA-39-5035 43 283 5'UTR-CDS Intra-chr q28 q28 Tumor suppressor gene Transcription factor Seq+ 36121 ChimerSeq STARFusion TCGA_RNA-Seq NDUFA10-SGPP2 NDUFA10 chr2 240929491 - SGPP2 chr2 223386486 + Exonic hg19 LUSC TCGA-39-5035 12 46 In-Frame Intra-chr q36.1 Seq+ 36122 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC11-IGKC DNAJC11 chr1 6727775 - IGKC chr2 89160437 - Exonic hg19 LUSC TCGA-39-5035 20 1 Out-of-frame Inter-chr p36.31 Tumor suppressor gene p11.2 36123 ChimerSeq STARFusion TCGA_RNA-Seq DIP2B-IGKC DIP2B chr12 51084878 + IGKC chr2 89161434 - Exonic hg19 LUSC TCGA-39-5035 11 1 Out-of-frame Inter-chr q13.12 p11.2 36124 ChimerSeq STARFusion TCGA_RNA-Seq IGHGP-FBN3 IGHGP chr14 106134592 - FBN3 chr19 8138054 - Exonic hg19 LUSC TCGA-39-5035 9 0 Out-of-frame Inter-chr p13.2 36125 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-PDS5B IGL@ chr22 23199225 + PDS5B chr13 33262833 + Exonic hg19 LUSC TCGA-39-5035 8 1 Out-of-frame Inter-chr q11.22 q13.1 Tumor suppressor gene 36126 ChimerSeq STARFusion TCGA_RNA-Seq PICK1-IGKC PICK1 chr22 38453899 + IGKC chr2 89161074 - Exonic hg19 LUSC TCGA-39-5035 7 1 Out-of-frame Inter-chr q13.1 p11.2 36127 ChimerSeq STARFusion TCGA_RNA-Seq SNX8-KDELR2 SNX8 chr7 2353963 - KDELR2 chr7 6502806 - Exonic hg19 LUSC TCGA-39-5035 2 13 In-Frame Intra-chr p22.3 p22.1 Seq+ 36128 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57768072 + VMP1 chr17 57917129 + Exonic hg19 LUSC TCGA-39-5035 2 5 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 36129 ChimerSeq STARFusion TCGA_RNA-Seq FGGY-KIF2C FGGY chr1 59844509 + KIF2C chr1 45213056 + Exonic hg19 LUSC TCGA-39-5035 2 5 Out-of-frame Intra-chr p32.1 p34.1 Seq+ 36130 ChimerSeq STARFusion TCGA_RNA-Seq PREP-SIM1 PREP chr6 105736633 - SIM1 chr6 100868834 - Exonic hg19 LUSC TCGA-46-6026 16 96 In-Frame Intra-chr q21 q16.3 Transcription factor Seq+ 36131 ChimerSeq STARFusion TCGA_RNA-Seq TRIP12-KIF1A TRIP12 chr2 230786596 - KIF1A chr2 241737229 - Exonic hg19 LUSC TCGA-46-6026 6 19 5'UTR-5'UTR Intra-chr q36.3 q37.3 Seq+ 36132 ChimerSeq STARFusion TCGA_RNA-Seq USP15-MON2 USP15 chr12 62688087 + MON2 chr12 62938678 + Exonic hg19 LUSC TCGA-46-6026 5 13 Out-of-frame Intra-chr q14.1 q14.1 36133 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-SLC1A6 ZSWIM4 chr19 13910735 + SLC1A6 chr19 15083729 - Exonic hg19 LUSC TCGA-46-6026 2 13 CDS-5'UTR Intra-chr p13.13 p13.12 Seq+ 36134 ChimerSeq STARFusion TCGA_RNA-Seq CELSR1-SEZ6L CELSR1 chr22 46929524 - SEZ6L chr22 26688372 + Exonic hg19 LUSC TCGA-46-6025 138 521 In-Frame Intra-chr q13.31 q12.1 Seq+ 36135 ChimerSeq STARFusion TCGA_RNA-Seq SDHAP1-TFRC SDHAP1 chr3 195717061 - TFRC chr3 195782172 - Exonic hg19 LUSC TCGA-46-6025 31 186 3'UTR-CDS Intra-chr q29 q29 36136 ChimerSeq STARFusion TCGA_RNA-Seq STX5-SNHG1 STX5 chr11 62591638 - SNHG1 chr11 62620311 - Exonic hg19 LUSC TCGA-46-6025 23 177 CDS-3'UTR Intra-chr q12.3 q12.3 Seq+ 36137 ChimerSeq STARFusion TCGA_RNA-Seq STX5-SNHG1 STX5 chr11 62591638 - SNHG1 chr11 62620153 - Exonic hg19 LUSC TCGA-46-6025 12 175 CDS-3'UTR Intra-chr q12.3 q12.3 Seq+ 36138 ChimerSeq STARFusion TCGA_RNA-Seq TLK1-CREG2 TLK1 chr2 171902684 - CREG2 chr2 101971828 - Exonic hg19 LUSC TCGA-46-6025 25 94 In-Frame Intra-chr q31.1 Other:TLK q11.2 Seq+ 36139 ChimerSeq STARFusion TCGA_RNA-Seq KCNAB2-POLB KCNAB2 chr1 6052848 + POLB chr8 42202471 + Exonic hg19 LUSC TCGA-46-6025 10 34 5'UTR-CDS Inter-chr p36.31 p11.21 Seq+ 36140 ChimerSeq STARFusion TCGA_RNA-Seq GRB2-TCTEX1D2 GRB2 chr17 73389632 - TCTEX1D2 chr3 196022940 - Exonic hg19 LUSC TCGA-46-6025 13 21 Out-of-frame Inter-chr q25.1 q29 Seq+ 36141 ChimerSeq STARFusion TCGA_RNA-Seq BCL2L11-ACOXL BCL2L11 chr2 111881716 + ACOXL chr2 111875193 + Exonic hg19 LUSC TCGA-46-6025 5 45 Out-of-frame Intra-chr q13 Tumor suppressor gene q13 Seq+ 36142 ChimerSeq STARFusion TCGA_RNA-Seq NUMBL-BRD4 NUMBL chr19 41173866 - BRD4 chr19 15349698 - Exonic hg19 LUSC TCGA-46-6025 16 1 Out-of-frame Intra-chr q13.2 p13.12 Atypical:BRD 36143 ChimerSeq STARFusion TCGA_RNA-Seq BCL2L11-ACOXL BCL2L11 chr2 111881446 + ACOXL chr2 111875193 + Exonic hg19 LUSC TCGA-46-6025 2 45 Out-of-frame Intra-chr q13 Tumor suppressor gene q13 Seq+ 36144 ChimerSeq STARFusion TCGA_RNA-Seq GRB2-PCYT1A GRB2 chr17 73389632 - PCYT1A chr3 195997412 - Exonic hg19 LUSC TCGA-46-6025 8 20 CDS-5'UTR Inter-chr q25.1 q29 Seq+ 36145 ChimerSeq STARFusion TCGA_RNA-Seq UQCC1-GDF5 UQCC1 chr20 33999743 - GDF5 chr20 34022581 - Exonic hg19 LUSC TCGA-46-6025 7 19 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 36146 ChimerSeq STARFusion TCGA_RNA-Seq KCNAB2-POLB KCNAB2 chr1 6052848 + POLB chr8 42196530 + Exonic hg19 LUSC TCGA-46-6025 3 33 5'UTR-CDS Inter-chr p36.31 p11.21 Seq+ 36147 ChimerSeq STARFusion TCGA_RNA-Seq LINC00514-PAQR4 LINC00514 chr16 3043660 + PAQR4 chr16 3023139 + Exonic hg19 LUSC TCGA-46-6025 4 17 Out-of-frame Intra-chr p13.3 p13.3 36148 ChimerSeq STARFusion TCGA_RNA-Seq SHC1-CKS1B SHC1 chr1 154941855 - CKS1B chr5 61808251 - Exonic hg19 LUSC TCGA-46-6025 6 9 Out-of-frame Inter-chr q21.3 q21.3 Oncogene Seq+ 36149 ChimerSeq STARFusion TCGA_RNA-Seq SHC1-CKS1B SHC1 chr1 154941854 - CKS1B chr1 154950463 + Exonic hg19 LUSC TCGA-46-6025 6 9 In-Frame Intra-chr q21.3 q21.3 Oncogene Seq+ 36150 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF5-MRPS22 RAPGEF5 chr7 22270465 - MRPS22 chr3 139065720 + Exonic hg19 LUSC TCGA-46-6025 3 13 Out-of-frame Inter-chr p15.3 q23 Seq+ 36151 ChimerSeq STARFusion TCGA_RNA-Seq POLG2-DDX5 POLG2 chr17 62488784 - DDX5 chr17 62496444 - Exonic hg19 LUSC TCGA-46-6025 2 15 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 36152 ChimerSeq STARFusion TCGA_RNA-Seq IGSF3-PARL IGSF3 chr1 117122014 - PARL chr3 183547497 - Exonic hg19 LUSC TCGA-85-7698 9 28 Out-of-frame Inter-chr p13.1 q27.1 Seq+ 36153 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-DHX40 IGH@ chr14 106641562 - DHX40 chr17 57680991 + Exonic hg19 LUSC TCGA-85-7699 23 1 Out-of-frame Inter-chr 32.33 q23.1 36154 ChimerSeq STARFusion TCGA_RNA-Seq ANO1-FGF19 ANO1 chr11 70026162 + FGF19 chr11 69518132 - Exonic hg19 LUSC TCGA-85-7699 10 50 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 36155 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LUSC TCGA-85-7699 11 10 In-Frame Intra-chr p13.3 p13.3 36156 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-DHX40 IGH@ chr14 106573232 - DHX40 chr17 57680991 + Exonic hg19 LUSC TCGA-85-7699 13 1 Out-of-frame Inter-chr 32.33 q23.1 36157 ChimerSeq STARFusion TCGA_RNA-Seq IGHGP-TINAGL1 IGHGP chr14 106134590 - TINAGL1 chr1 32052504 + Exonic hg19 LUSC TCGA-85-7699 10 1 Out-of-frame Inter-chr p35.2 36158 ChimerSeq STARFusion TCGA_RNA-Seq DCTN2-DDX23 DCTN2 chr12 57939811 - DDX23 chr12 49230049 - Exonic hg19 LUSC TCGA-85-6175 106 389 In-Frame Intra-chr q13.3 q13.12 Seq+ 36159 ChimerSeq STARFusion TCGA_RNA-Seq LOH12CR1-PTPRR LOH12CR1 chr12 12514283 + PTPRR chr12 71095103 - Exonic hg19 LUSC TCGA-85-6175 10 61 Out-of-frame Intra-chr q15 Seq+ 36160 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A36-PEX5L SLC25A36 chr3 140660937 + PEX5L chr3 179533792 - Exonic hg19 LUSC TCGA-85-6175 7 31 Out-of-frame Intra-chr q23 q26.33 Seq+ 36161 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106175004 - Exonic hg19 LUSC TCGA-85-6175 6 8 Out-of-frame Inter-chr q24.2 32.33 36162 ChimerSeq STARFusion TCGA_RNA-Seq KDM5C-IGH@ KDM5C chrX 53246347 - IGH@ chr14 106330843 - Exonic hg19 LUSC TCGA-85-8049 161 2 Out-of-frame Inter-chr p11.22 Oncogene 32.33 36163 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-IGH@ TNRC6B chr22 40727710 + IGH@ chr14 106209410 - Exonic hg19 LUSC TCGA-85-8049 75 1 Out-of-frame Inter-chr q13.1 32.33 36164 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-IGH@ TNRC6B chr22 40727710 + IGH@ chr14 106136184 - Exonic hg19 LUSC TCGA-85-8049 66 1 Out-of-frame Inter-chr q13.1 32.33 36165 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-IGHG3 TNRC6B chr22 40727710 + IGHG3 chr14 106237745 - Exonic hg19 LUSC TCGA-85-8049 49 1 Out-of-frame Inter-chr q13.1 36166 ChimerSeq STARFusion TCGA_RNA-Seq HSPG2-IGHG3 HSPG2 chr1 22168089 - IGHG3 chr14 106330467 - Exonic hg19 LUSC TCGA-85-8049 30 1 Out-of-frame Inter-chr p36.12 36167 ChimerSeq STARFusion TCGA_RNA-Seq TP63-IGHG3 TP63 chr3 189612667 + IGHG3 chr14 106330845 - Exonic hg19 LUSC TCGA-85-8049 28 2 Out-of-frame Inter-chr q28 Tumor suppressor gene Transcription factor 36168 ChimerSeq STARFusion TCGA_RNA-Seq HSPG2-IGHG3 HSPG2 chr1 22168089 - IGHG3 chr14 106330066 - Exonic hg19 LUSC TCGA-85-8049 24 1 Out-of-frame Inter-chr p36.12 36169 ChimerSeq STARFusion TCGA_RNA-Seq COASY-IGHA1 COASY chr17 40714610 + IGHA1 chr14 106175002 - Exonic hg19 LUSC TCGA-85-8049 8 2 Out-of-frame Inter-chr q21.2 36170 ChimerSeq STARFusion TCGA_RNA-Seq KDM5C-IGHG1 KDM5C chrX 53246347 - IGHG1 chr14 106330843 - Exonic hg19 LUSC TCGA-85-8049 5 2 Out-of-frame Inter-chr p11.22 Oncogene q32.33 36171 ChimerSeq STARFusion TCGA_RNA-Seq RELT-PAAF1 RELT chr11 73103513 + PAAF1 chr11 73620444 + Exonic hg19 LUSC TCGA-85-7950 12 42 In-Frame Intra-chr q13.4 q13.4 Seq+ 36172 ChimerSeq STARFusion TCGA_RNA-Seq ARID1B-TIAM2 ARID1B chr6 157470085 + TIAM2 chr6 155265250 + Exonic hg19 LUSC TCGA-85-7950 12 26 CDS-5'UTR Intra-chr q25.3 Oncogene q25.2 Seq+ 36173 ChimerSeq STARFusion TCGA_RNA-Seq ARID1B-TIAM2 ARID1B chr6 157454341 + TIAM2 chr6 155265250 + Exonic hg19 LUSC TCGA-85-7950 5 26 CDS-5'UTR Intra-chr q25.3 Oncogene q25.2 Seq+ 36174 ChimerSeq STARFusion TCGA_RNA-Seq C12orf5-PRR4 C12orf5 chr12 4440483 + PRR4 chr12 11001006 - Exonic hg19 LUSC TCGA-77-A5GB 13 68 In-Frame Intra-chr Seq+ 36175 ChimerSeq STARFusion TCGA_RNA-Seq C12orf5-PRR4 C12orf5 chr12 4446326 + PRR4 chr12 11001006 - Exonic hg19 LUSC TCGA-77-A5GB 11 66 Out-of-frame Intra-chr Seq+ 36176 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG3 GAS6 chr13 114525073 - IGHG3 chr14 106237746 - Exonic hg19 LUSC TCGA-56-7582 59 0 Out-of-frame Inter-chr q34 Oncogene 36177 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 LUSC TCGA-56-7580 8 0 Out-of-frame Inter-chr q13.33 p21.1 36178 ChimerSeq STARFusion TCGA_RNA-Seq TRAF7-LRRC1 TRAF7 chr16 2215937 + LRRC1 chr6 53743791 + Exonic hg19 LUSC TCGA-85-A4QR 34 181 In-Frame Inter-chr p13.3 Oncogene p12.1 Seq+ 36179 ChimerSeq STARFusion TCGA_RNA-Seq ZFAS1-CNTNAP2 ZFAS1 chr20 47897501 + CNTNAP2 chr7 147183027 + Exonic hg19 LUSC TCGA-85-A4QR 4 7 Out-of-frame Inter-chr q13.13 Tumor suppressor gene Tumor suppressor gene Seq+ 36180 ChimerSeq STARFusion TCGA_RNA-Seq C19orf12-ZNF749 C19orf12 chr19 30192081 - ZNF749 chr19 57949742 + Exonic hg19 LUSC TCGA-85-A4QR 3 5 Out-of-frame Intra-chr q12 q13.43 Transcription factor Seq+ 36181 ChimerSeq STARFusion TCGA_RNA-Seq ECD-PCDH15 ECD chr10 74894361 - PCDH15 chr10 55996691 - Exonic hg19 LUSC TCGA-85-A4QR 2 4 Out-of-frame Intra-chr q22.2 q21.1 Seq+ 36182 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGHG1 INTS1 chr7 1511981 - IGHG1 chr14 106209410 - Exonic hg19 LUSC TCGA-77-8139 16 3 Out-of-frame Inter-chr p22.3 q32.33 36183 ChimerSeq STARFusion TCGA_RNA-Seq HCFC1-IGHG1 HCFC1 chrX 153222118 - IGHG1 chr14 106209407 - Exonic hg19 LUSC TCGA-77-8139 12 1 Out-of-frame Inter-chr q28 q32.33 36184 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGHG1 INTS1 chr7 1511981 - IGHG1 chr14 106237745 - Exonic hg19 LUSC TCGA-77-8139 8 3 Out-of-frame Inter-chr p22.3 q32.33 36185 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGHGP HOMER2 chr15 83561493 - IGHGP chr14 106136184 - Exonic hg19 LUSC TCGA-77-8139 7 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene 36186 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-TEAD2 IGL@ chr22 22764606 + TEAD2 chr19 49844655 - Exonic hg19 LUSC TCGA-77-8139 5 1 Out-of-frame Inter-chr q11.22 q13.33 Transcription factor 36187 ChimerSeq STARFusion TCGA_RNA-Seq SMAD4-IGHG2 SMAD4 chr18 48556640 + IGHG2 chr14 106111130 - Exonic hg19 LUSC TCGA-77-8139 4 1 Out-of-frame Inter-chr q21.2 Oncogene Tumor suppressor gene Transcription factor 36188 ChimerSeq STARFusion TCGA_RNA-Seq SUN1-IGHG1 SUN1 chr7 889699 + IGHG1 chr14 106209409 - Exonic hg19 LUSC TCGA-77-8139 4 1 Out-of-frame Inter-chr p22.3 q32.33 36189 ChimerSeq STARFusion TCGA_RNA-Seq KIF13A-CCHCR1 KIF13A chr6 17849608 - CCHCR1 chr6 31113585 - Exonic hg19 LUSC TCGA-77-8138 8 59 In-Frame Intra-chr p22.3 Seq+ 36190 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGH@ TET3 chr2 74329256 + IGH@ chr14 106209410 - Exonic hg19 LUSC TCGA-77-8138 4 1 Out-of-frame Inter-chr p13.1 Transcription factor 32.33 36191 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-SHANK2 CTTN chr11 70269101 + SHANK2 chr11 70319544 - Exonic hg19 LUSC TCGA-77-8133 9 48 Out-of-frame Intra-chr q13.3 q13.4 Seq+ 36192 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-KREMEN1 IGH@ chr14 106791004 - KREMEN1 chr22 29533345 + Exonic hg19 LUSC TCGA-77-8133 5 2 Out-of-frame Inter-chr 32.33 q12.1 36193 ChimerSeq STARFusion TCGA_RNA-Seq MNAT1-SPSB1 MNAT1 chr14 61346553 + SPSB1 chr1 9427507 + Exonic hg19 LUSC TCGA-77-8131 2 15 Out-of-frame Inter-chr q23.1 p36.22 Seq+ 36194 ChimerSeq STARFusion TCGA_RNA-Seq SUGP2-IGH@ SUGP2 chr19 19115133 - IGH@ chr14 106330466 - Exonic hg19 LUSC TCGA-77-8136 21 1 Out-of-frame Inter-chr p13.11 32.33 36195 ChimerSeq STARFusion TCGA_RNA-Seq GMDS-CASC15 GMDS chr6 1930337 - CASC15 chr6 22174227 + Exonic hg19 LUSC TCGA-77-8136 5 40 Out-of-frame Intra-chr p25.3 p22.3 Seq+ 36196 ChimerSeq STARFusion TCGA_RNA-Seq DEDD-APOA2 DEDD chr1 161090926 - APOA2 chr1 161193191 - Exonic hg19 LUSC TCGA-77-8136 3 26 Out-of-frame Intra-chr q23.3 q23.3 36197 ChimerSeq STARFusion TCGA_RNA-Seq DDX39B-NCR3 DDX39B chr6 31503144 - NCR3 chr6 31557676 - Exonic hg19 LUSC TCGA-77-8136 3 3 Out-of-frame Intra-chr Seq+ 36198 ChimerSeq STARFusion TCGA_RNA-Seq TBCE-GGPS1 TBCE chr1 235543464 + GGPS1 chr1 235505023 + Exonic hg19 LUSC TCGA-37-A5EN 4 19 In-Frame Intra-chr q42.3 Seq+ 36199 ChimerSeq STARFusion TCGA_RNA-Seq TNPO2-HOOK2 TNPO2 chr19 12822110 - HOOK2 chr19 12885711 - Exonic hg19 LUSC TCGA-37-A5EN 3 7 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 36200 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD27-ZNF536 ANKRD27 chr19 33098541 - ZNF536 chr19 31025754 + Exonic hg19 LUSC TCGA-37-A5EN 2 9 Out-of-frame Intra-chr q13.11 q12 Transcription factor Seq+ 36201 ChimerSeq STARFusion TCGA_RNA-Seq BAG2-PRIM2 BAG2 chr6 57046939 + PRIM2 chr6 57244699 + Exonic hg19 LUSC TCGA-37-A5EL 5 16 Out-of-frame Intra-chr p12.1 p11.2 Seq+ 36202 ChimerSeq STARFusion TCGA_RNA-Seq SNTB2-CIRH1A SNTB2 chr16 69221649 + CIRH1A chr16 69187487 + Exonic hg19 LUSC TCGA-37-A5EL 3 21 Out-of-frame Intra-chr Seq+ 36203 ChimerSeq STARFusion TCGA_RNA-Seq SNTB2-CIRH1A SNTB2 chr16 69221636 + CIRH1A chr16 69187487 + Exonic hg19 LUSC TCGA-37-A5EL 2 19 Out-of-frame Intra-chr Seq+ 36204 ChimerSeq STARFusion TCGA_RNA-Seq KIF13A-F13A1 KIF13A chr6 17987285 - F13A1 chr6 6197559 - Exonic hg19 LUSC TCGA-37-A5EM 86 527 In-Frame Intra-chr p22.3 p25.1 Seq+ 36205 ChimerSeq STARFusion TCGA_RNA-Seq RANBP9-NEDD9 RANBP9 chr6 13697017 - NEDD9 chr6 11306388 - Exonic hg19 LUSC TCGA-37-A5EM 2 8 CDS-5'UTR Intra-chr p23 Tumor suppressor gene p24.2 Seq+ 36206 ChimerSeq STARFusion TCGA_RNA-Seq ZNF43-LINC01054 ZNF43 chr19 22018838 - LINC01054 chr13 115096253 - Exonic hg19 LUSC TCGA-37-5819 22 172 Out-of-frame Inter-chr p12 Transcription factor q34 36207 ChimerSeq STARFusion TCGA_RNA-Seq ZNF43-LINC01054 ZNF43 chr19 22018839 - LINC01054 chr13 115098087 - Exonic hg19 LUSC TCGA-37-5819 6 168 Out-of-frame Inter-chr p12 Transcription factor q34 36208 ChimerSeq STARFusion TCGA_RNA-Seq CSRP1-IGL@ CSRP1 chr1 201459435 - IGL@ chr22 23247175 + Exonic hg19 LUSC TCGA-37-5819 30 2 Out-of-frame Inter-chr q32.1 q11.22 36209 ChimerSeq STARFusion TCGA_RNA-Seq CSRP1-IGLC3 CSRP1 chr1 201459435 - IGLC3 chr22 23247175 + Exonic hg19 LUSC TCGA-37-5819 29 1 Out-of-frame Inter-chr q32.1 q11.22 36210 ChimerSeq STARFusion TCGA_RNA-Seq FAM21A-LURAP1L FAM21A chr10 51879529 + LURAP1L chr9 12821385 + Exonic hg19 LUSC TCGA-37-5819 17 29 In-Frame Inter-chr p23 36211 ChimerSeq STARFusion TCGA_RNA-Seq ZNF33B-CCPG1 ZNF33B chr10 43127377 - CCPG1 chr15 55670574 - Exonic hg19 LUSC TCGA-37-5819 10 47 In-Frame Inter-chr q11.21 Transcription factor q21.3 Seq+ 36212 ChimerSeq STARFusion TCGA_RNA-Seq ZNF33B-CCPG1 ZNF33B chr10 43127377 - CCPG1 chr15 55670574 - Exonic hg19 LUSC TCGA-37-5819 10 47 In-Frame Inter-chr q11.21 Transcription factor q21.3 Seq+ 36213 ChimerSeq STARFusion TCGA_RNA-Seq DDX5-IGHG3 DDX5 chr17 62503157 - IGHG3 chr14 106329461 - Exonic hg19 LUSC TCGA-37-5819 11 1 Out-of-frame Inter-chr q23.3 36214 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB2-IGKC DNAJB2 chr2 220151425 + IGKC chr2 89156807 - Exonic hg19 LUSC TCGA-37-5819 10 1 Out-of-frame Intra-chr q35 p11.2 36215 ChimerSeq STARFusion TCGA_RNA-Seq PCYOX1L-IGHA1 PCYOX1L chr5 148747738 + IGHA1 chr14 106175004 - Exonic hg19 LUSC TCGA-37-5819 8 1 Out-of-frame Inter-chr q32 36216 ChimerSeq STARFusion TCGA_RNA-Seq TP73-DDX11L16 TP73 chr1 3624355 + DDX11L16 chrY 59360718 - Exonic hg19 LUSC TCGA-37-5819 3 13 Out-of-frame Inter-chr p36.32 Tumor suppressor gene Transcription factor q28 36217 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57768072 + VMP1 chr17 57895073 + Exonic hg19 LUSC TCGA-60-2724 9 55 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 36218 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57728677 + VMP1 chr17 57915656 + Exonic hg19 LUSC TCGA-60-2724 6 54 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 36219 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57733388 + VMP1 chr17 57915656 + Exonic hg19 LUSC TCGA-60-2724 2 54 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 36220 ChimerSeq STARFusion TCGA_RNA-Seq RABEP1-PIGL RABEP1 chr17 5257785 + PIGL chr17 16203202 + Exonic hg19 LUSC TCGA-60-2724 4 8 Out-of-frame Intra-chr p13.2 p11.2 Seq+ 36221 ChimerSeq STARFusion TCGA_RNA-Seq TAOK3-VSIG10 TAOK3 chr12 118810453 - VSIG10 chr12 118520234 - Exonic hg19 LUSC TCGA-60-2724 3 8 5'UTR-CDS Intra-chr q24.23 q24.23 Seq+ 36222 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-PRCP IGH@ chr14 106805209 - PRCP chr11 82611569 - Exonic hg19 LUSC TCGA-60-2725 24 1 Out-of-frame Inter-chr 32.33 q14.1 36223 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-PRCP IGH@ chr14 106714362 - PRCP chr11 82611569 - Exonic hg19 LUSC TCGA-60-2725 21 1 Out-of-frame Inter-chr 32.33 q14.1 36224 ChimerSeq STARFusion TCGA_RNA-Seq HMCN1-IGL@ HMCN1 chr1 186092352 + IGL@ chr22 23237555 + Exonic hg19 LUSC TCGA-60-2725 21 0 Out-of-frame Inter-chr q25.3 q11.22 36225 ChimerSeq STARFusion TCGA_RNA-Seq HMCN1-IGLC1 HMCN1 chr1 186092352 + IGLC1 chr22 23237555 + Exonic hg19 LUSC TCGA-60-2725 21 0 Out-of-frame Inter-chr q25.3 q11.22 36226 ChimerSeq STARFusion TCGA_RNA-Seq HMCN1-IGLL5 HMCN1 chr1 186092352 + IGLL5 chr22 23237555 + Exonic hg19 LUSC TCGA-60-2725 21 0 In-Frame Inter-chr q25.3 q11.22 36227 ChimerSeq STARFusion TCGA_RNA-Seq AP2A1-IGH@ AP2A1 chr19 50306410 + IGH@ chr14 106330472 - Exonic hg19 LUSC TCGA-60-2725 5 2 Out-of-frame Inter-chr q13.33 32.33 36228 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-PHGDH WARS2 chr1 119618973 - PHGDH chr1 120263793 + Exonic hg19 LUSC TCGA-60-2725 2 11 In-Frame Intra-chr p12 p12 Seq+ 36229 ChimerSeq STARFusion TCGA_RNA-Seq REL-MAN1A2 REL chr2 61147777 + MAN1A2 chr1 118035769 + Exonic hg19 LUSC TCGA-60-2726 2 9 In-Frame Inter-chr p16.1 Oncogene Transcription factor p12 Seq+ 36230 ChimerSeq STARFusion TCGA_RNA-Seq KCNK5-KIF6 KCNK5 chr6 39196702 - KIF6 chr6 39398937 - Exonic hg19 LUSC TCGA-60-2720 5 17 Out-of-frame Intra-chr p21.2 p21.2 Seq+ 36231 ChimerSeq STARFusion TCGA_RNA-Seq DNMBP-TPTE2 DNMBP chr10 101769595 - TPTE2 chr13 20012293 - Exonic hg19 LUSC TCGA-60-2720 5 13 5'UTR-CDS Inter-chr q24.2 q12.11 Tumor suppressor gene Seq+ 36232 ChimerSeq STARFusion TCGA_RNA-Seq KCNK5-KIF6 KCNK5 chr6 39196702 - KIF6 chr6 39387779 - Exonic hg19 LUSC TCGA-60-2720 2 17 Out-of-frame Intra-chr p21.2 p21.2 Seq+ 36233 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSD1 PRSS27 chr16 2763530 - TPSD1 chr16 1308333 + Exonic hg19 LUSC TCGA-60-2720 5 3 In-Frame Intra-chr p13.3 p13.3 36234 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LUSC TCGA-60-2721 7 15 In-Frame Intra-chr p13.3 p13.3 36235 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0100-ALKBH5 KIAA0100 chr17 26970628 - ALKBH5 chr17 18110129 + Exonic hg19 LUSC TCGA-60-2722 37 199 In-Frame Intra-chr q11.2 p11.2 Seq+ 36236 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0100-ALKBH5 KIAA0100 chr17 26971076 - ALKBH5 chr17 18110129 + Exonic hg19 LUSC TCGA-60-2722 17 196 Out-of-frame Intra-chr q11.2 p11.2 Seq+ 36237 ChimerSeq STARFusion TCGA_RNA-Seq ARL4D-DNAJC7 ARL4D chr17 41476461 + DNAJC7 chr17 40135654 - Exonic hg19 LUSC TCGA-60-2722 3 11 5'UTR-CDS Intra-chr q21.31 q21.2 Seq+ 36238 ChimerSeq STARFusion TCGA_RNA-Seq KCNQ5-DST KCNQ5 chr6 73332315 + DST chr6 56342286 - Exonic hg19 LUSC TCGA-60-2722 2 6 Out-of-frame Intra-chr q13 p12.1 Oncogene Seq+ 36239 ChimerSeq STARFusion TCGA_RNA-Seq VEGFA-IGH@ VEGFA chr6 43744355 + IGH@ chr14 106329449 - Exonic hg19 LUSC TCGA-60-2723 17 3 Out-of-frame Inter-chr p21.1 Tumor suppressor gene 32.33 36240 ChimerSeq STARFusion TCGA_RNA-Seq VEGFA-IGHJ6 VEGFA chr6 43744355 + IGHJ6 chr14 106329449 - Exonic hg19 LUSC TCGA-60-2723 17 1 Out-of-frame Inter-chr p21.1 Tumor suppressor gene 36241 ChimerSeq STARFusion TCGA_RNA-Seq VEGFA-IGHM VEGFA chr6 43744355 + IGHM chr14 106329449 - Exonic hg19 LUSC TCGA-60-2723 17 1 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q32.33 36242 ChimerSeq STARFusion TCGA_RNA-Seq SSR4-IGKC SSR4 chrX 153061424 + IGKC chr2 89160114 - Exonic hg19 LUSC TCGA-60-2723 14 2 Out-of-frame Inter-chr q28 p11.2 36243 ChimerSeq STARFusion TCGA_RNA-Seq THTPA-IGH@ THTPA chr14 24025679 + IGH@ chr14 106330070 - Exonic hg19 LUSC TCGA-60-2723 13 0 Out-of-frame Intra-chr q11.2 32.33 36244 ChimerSeq STARFusion TCGA_RNA-Seq THTPA-IGHG3 THTPA chr14 24025679 + IGHG3 chr14 106330070 - Exonic hg19 LUSC TCGA-60-2723 13 0 Out-of-frame Intra-chr q11.2 36245 ChimerSeq STARFusion TCGA_RNA-Seq THTPA-IGHJ5 THTPA chr14 24025679 + IGHJ5 chr14 106330070 - Exonic hg19 LUSC TCGA-60-2723 13 0 Out-of-frame Intra-chr q11.2 Seq+ 36246 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57728677 + VMP1 chr17 57915656 + Exonic hg19 LUSC TCGA-77-7142 69 292 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 36247 ChimerSeq STARFusion TCGA_RNA-Seq SERINC5-THBS4 SERINC5 chr5 79470777 - THBS4 chr5 79372678 + Exonic hg19 LUSC TCGA-77-7142 45 163 In-Frame Intra-chr q14.1 q14.1 Seq+ 36248 ChimerSeq STARFusion TCGA_RNA-Seq PDIA5-DIRC2 PDIA5 chr3 122843190 + DIRC2 chr3 122598110 + Exonic hg19 LUSC TCGA-77-7142 42 115 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 36249 ChimerSeq STARFusion TCGA_RNA-Seq NF1-RNF135 NF1 chr17 29422387 + RNF135 chr17 29324260 + Exonic hg19 LUSC TCGA-77-7142 29 26 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 36250 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB38-ACPL2 ZBTB38 chr3 141122873 + ACPL2 chr3 140978965 + Exonic hg19 LUSC TCGA-77-7142 9 35 5'UTR-5'UTR Intra-chr q23 Transcription factor Seq+ 36251 ChimerSeq STARFusion TCGA_RNA-Seq PDE4D-RAB3C PDE4D chr5 59064073 - RAB3C chr5 58120865 + Exonic hg19 LUSC TCGA-77-7142 6 40 In-Frame Intra-chr q12.1 q11.2 Seq+ 36252 ChimerSeq STARFusion TCGA_RNA-Seq HN1-NUP85 HN1 chr17 73150437 - NUP85 chr17 73204622 + Exonic hg19 LUSC TCGA-77-7142 6 19 Out-of-frame Intra-chr q25.1 Seq+ 36253 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0907-UBQLN4 KIAA0907 chr1 155903616 - UBQLN4 chr1 156023500 - Exonic hg19 LUSC TCGA-77-7142 7 14 Out-of-frame Intra-chr q22 q22 Seq+ 36254 ChimerSeq STARFusion TCGA_RNA-Seq AHNAK-EEF1G AHNAK chr11 62301133 - EEF1G chr11 62335000 - Exonic hg19 LUSC TCGA-77-7142 3 8 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q12.3 Seq+ 36255 ChimerSeq STARFusion TCGA_RNA-Seq AHNAK-MIR3654 AHNAK chr11 62301133 - MIR3654 chr11 62335000 - Exonic hg19 LUSC TCGA-77-7142 3 8 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q33 36256 ChimerSeq STARFusion TCGA_RNA-Seq RCOR1-LSAMP RCOR1 chr14 103174920 + LSAMP chr3 115571464 - Exonic hg19 LUSC TCGA-77-7142 3 5 Out-of-frame Inter-chr q32.31 q13.31 Tumor suppressor gene Seq+ 36257 ChimerSeq STARFusion TCGA_RNA-Seq CDKAL1-OR2H1 CDKAL1 chr6 20781496 + OR2H1 chr6 29426231 + Exonic hg19 LUSC TCGA-77-7142 2 6 CDS-5'UTR Intra-chr p22.3 Seq+ 36258 ChimerSeq STARFusion TCGA_RNA-Seq TTC28-PITPNB TTC28 chr22 29025540 - PITPNB chr22 28256229 - Exonic hg19 LUSC TCGA-77-7141 8 13 In-Frame Intra-chr q12.1 q12.1 Seq+ 36259 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD12-EPB41L3 ANKRD12 chr18 9182517 + EPB41L3 chr18 5489160 - Exonic hg19 LUSC TCGA-77-7141 4 7 Out-of-frame Intra-chr p11.22 p11.31 Tumor suppressor gene Seq+ 36260 ChimerSeq STARFusion TCGA_RNA-Seq AOAH-ELMO1 AOAH chr7 36698771 - ELMO1 chr7 36934622 - Exonic hg19 LUSC TCGA-77-7140 69 196 In-Frame Intra-chr p14.2 p14.1 Seq+ 36261 ChimerSeq STARFusion TCGA_RNA-Seq CYB561-AMZ2P1 CYB561 chr17 61523606 - AMZ2P1 chr17 62964499 - Exonic hg19 LUSC TCGA-77-7140 24 171 5'UTR-3'UTR Intra-chr q23.3 q24.1 Seq+ 36262 ChimerSeq STARFusion TCGA_RNA-Seq CYB561-AMZ2P1 CYB561 chr17 61523259 - AMZ2P1 chr17 62964499 - Exonic hg19 LUSC TCGA-77-7140 12 159 5'UTR-3'UTR Intra-chr q23.3 q24.1 Seq+ 36263 ChimerSeq STARFusion TCGA_RNA-Seq ZNF519-C16orf97 ZNF519 chr18 14132274 - C16orf97 chr16 52039546 - Exonic hg19 LUSC TCGA-77-7140 19 83 Out-of-frame Inter-chr p11.21 Transcription factor q12.1 Seq+ 36264 ChimerSeq STARFusion TCGA_RNA-Seq TMEM131-BAGE2 TMEM131 chr2 98504515 - BAGE2 chr21 11058323 - Exonic hg19 LUSC TCGA-77-7140 25 38 In-Frame Inter-chr q11.2 p11.2 Seq+ 36265 ChimerSeq STARFusion TCGA_RNA-Seq ZNF519-C16orf97 ZNF519 chr18 14132274 - C16orf97 chr16 52085799 - Exonic hg19 LUSC TCGA-77-7140 4 83 Out-of-frame Inter-chr p11.21 Transcription factor q12.1 Seq+ 36266 ChimerSeq STARFusion TCGA_RNA-Seq ADNP-PCIF1 ADNP chr20 49545188 - PCIF1 chr20 44569692 + Exonic hg19 LUSC TCGA-77-7140 13 40 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.12 Seq+ 36267 ChimerSeq STARFusion TCGA_RNA-Seq ADNP-PCIF1 ADNP chr20 49545188 - PCIF1 chr20 44571736 + Exonic hg19 LUSC TCGA-77-7140 10 40 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.12 Seq+ 36268 ChimerSeq STARFusion TCGA_RNA-Seq HMG20A-RCN2 HMG20A chr15 77713346 + RCN2 chr15 77224702 + Exonic hg19 LUSC TCGA-77-7140 9 43 5'UTR-CDS Intra-chr q24.3 Transcription factor q24.3 Seq+ 36269 ChimerSeq STARFusion TCGA_RNA-Seq PARD3-NSUN6 PARD3 chr10 34558585 - NSUN6 chr10 18905222 - Exonic hg19 LUSC TCGA-77-7140 13 27 In-Frame Intra-chr p11.21 p12.31 Seq+ 36270 ChimerSeq STARFusion TCGA_RNA-Seq ZNF519-C16orf97 ZNF519 chr18 14132274 - C16orf97 chr16 52068815 - Exonic hg19 LUSC TCGA-77-7140 2 58 Out-of-frame Inter-chr p11.21 Transcription factor q12.1 Seq+ 36271 ChimerSeq STARFusion TCGA_RNA-Seq RAB2A-PLEKHA6 RAB2A chr8 61497374 + PLEKHA6 chr1 204243937 - Exonic hg19 LUSC TCGA-77-7140 4 33 CDS-5'UTR Inter-chr q12.1 q32.1 Seq+ 36272 ChimerSeq STARFusion TCGA_RNA-Seq ADNP-PCIF1 ADNP chr20 49545188 - PCIF1 chr20 44573507 + Exonic hg19 LUSC TCGA-77-7140 2 40 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.12 Seq+ 36273 ChimerSeq STARFusion TCGA_RNA-Seq TFDP2-LINC00578 TFDP2 chr3 141811903 - LINC00578 chr3 177347205 + Exonic hg19 LUSC TCGA-77-7140 4 11 5'UTR-5'UTR Intra-chr q23 Transcription factor q26.32 36274 ChimerSeq STARFusion TCGA_RNA-Seq N4BP1-DDX19B N4BP1 chr16 48643686 - DDX19B chr16 70358488 + Exonic hg19 LUSC TCGA-94-A4VJ 25 114 Out-of-frame Intra-chr q12.1 q22.1 Seq+ 36275 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-CTTN ERBB2 chr17 37872192 + CTTN chr11 70269046 + Exonic hg19 LUSC TCGA-94-A4VJ 4 22 In-Frame Inter-chr q12 Oncogene q13.3 Seq+ 36276 ChimerSeq STARFusion TCGA_RNA-Seq ZNF562-RFX2 ZNF562 chr19 9770055 - RFX2 chr19 6047515 - Exonic hg19 LUSC TCGA-94-A4VJ 2 10 CDS-5'UTR Intra-chr p13.2 Transcription factor p13.3 Transcription factor Seq+ 36277 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A16-NDUFA9 SLC25A16 chr10 70246901 - NDUFA9 chr12 4791371 + Exonic hg19 LUSC TCGA-94-A4VJ 2 9 In-Frame Inter-chr q21.3 p13.32 Seq+ 36278 ChimerSeq STARFusion TCGA_RNA-Seq ANO1-SLC7A8 ANO1 chr11 70017145 + SLC7A8 chr14 23635749 - Exonic hg19 LUSC TCGA-68-A59J 11 51 In-Frame Inter-chr q13.3 q11.2 Seq+ 36279 ChimerSeq STARFusion TCGA_RNA-Seq GMPR2-NEDD8 GMPR2 chr14 24705346 + NEDD8 chr14 24687637 - Exonic hg19 LUSC TCGA-68-A59J 4 19 In-Frame Intra-chr q12 q12 36280 ChimerSeq STARFusion TCGA_RNA-Seq SRPK2-LINC01004 SRPK2 chr7 104909253 - LINC01004 chr7 104623138 - Exonic hg19 LUSC TCGA-68-A59J 3 21 Out-of-frame Intra-chr q22.3 CMGC:SRPK q22.3 36281 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF3-ZC3H7B ZNRF3 chr22 29383189 + ZC3H7B chr22 41716659 + Exonic hg19 LUSC TCGA-68-A59I 66 297 CDS-5'UTR Intra-chr q12.1 q13.2 Seq+ 36282 ChimerSeq STARFusion TCGA_RNA-Seq GOLGA4-IGKC GOLGA4 chr3 37368766 + IGKC chr2 89161435 - Exonic hg19 LUSC TCGA-68-A59I 22 1 Out-of-frame Inter-chr p22.2 p11.2 36283 ChimerSeq STARFusion TCGA_RNA-Seq GATS-TSC22D4 GATS chr7 99869461 - TSC22D4 chr7 100065223 - Exonic hg19 LUSC TCGA-68-A59I 7 40 In-Frame Intra-chr q22.1 q22.1 Seq+ 36284 ChimerSeq STARFusion TCGA_RNA-Seq GATS-TSC22D4 GATS chr7 99869461 - TSC22D4 chr7 100065223 - Exonic hg19 LUSC TCGA-68-A59I 7 27 In-Frame Intra-chr q22.1 q22.1 Seq+ 36285 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525073 - IGHG1 chr14 106209411 - Exonic hg19 LUSC TCGA-68-A59I 12 1 Out-of-frame Inter-chr q34 Oncogene q32.33 36286 ChimerSeq STARFusion TCGA_RNA-Seq RANBP2-IGKC RANBP2 chr2 109352612 + IGKC chr2 89160435 - Exonic hg19 LUSC TCGA-68-A59I 10 2 Out-of-frame Intra-chr q13 p11.2 36287 ChimerSeq STARFusion TCGA_RNA-Seq SMAD4-IGHG1 SMAD4 chr18 48556642 + IGHG1 chr14 106237744 - Exonic hg19 LUSC TCGA-68-A59I 9 1 Out-of-frame Inter-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q32.33 36288 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGHA1 HOMER2 chr15 83561493 - IGHA1 chr14 106175004 - Exonic hg19 LUSC TCGA-68-A59I 8 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene 36289 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525071 - IGHG1 chr14 106237744 - Exonic hg19 LUSC TCGA-68-A59I 7 1 Out-of-frame Inter-chr q34 Oncogene q32.33 36290 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1-LETM1 WHSC1 chr4 1906105 + LETM1 chr4 1850936 - Exonic hg19 LUSC TCGA-68-A59I 2 9 In-Frame Intra-chr Oncogene p16.3 36291 ChimerSeq STARFusion TCGA_RNA-Seq JAZF1-SFRP4 JAZF1 chr7 28031528 - SFRP4 chr7 37966376 - Exonic hg19 LUSC TCGA-68-A59I 2 8 CDS-5'UTR Intra-chr p15.1 Transcription factor p14.1 Tumor suppressor gene Seq+ 36292 ChimerSeq STARFusion TCGA_RNA-Seq LSM14A-URI1 LSM14A chr19 34663668 + URI1 chr19 30462100 + Exonic hg19 LUSC TCGA-22-5471 2 9 Out-of-frame Intra-chr q12 Seq+ 36293 ChimerSeq STARFusion TCGA_RNA-Seq MYBBP1A-ANKFY1 MYBBP1A chr17 4457105 - ANKFY1 chr17 4067467 - Exonic hg19 LUSC TCGA-22-5477 161 546 CDS-3'UTR Intra-chr p13.2 Tumor suppressor gene p13.2 Seq+ 36294 ChimerSeq STARFusion TCGA_RNA-Seq ITCH-HM13 ITCH chr20 33065617 + HM13 chr20 30126044 + Exonic hg19 LUSC TCGA-22-5477 12 22 Out-of-frame Intra-chr q11.22 q11.21 Seq+ 36295 ChimerSeq STARFusion TCGA_RNA-Seq TFRC-CPA3 TFRC chr3 195787051 - CPA3 chr3 148614307 + Exonic hg19 LUSC TCGA-22-5474 19 63 Out-of-frame Intra-chr q29 q24 Seq+ 36296 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-EXT1 PVT1 chr8 128806980 + EXT1 chr8 118849440 - Exonic hg19 LUSC TCGA-22-5474 5 49 5'UTR-CDS Intra-chr q24.21 q24.11 Oncogene Tumor suppressor gene Seq+ 36297 ChimerSeq STARFusion TCGA_RNA-Seq PIKFYVE-ZNF124 PIKFYVE chr2 209142432 + ZNF124 chr1 247323115 - Exonic hg19 LUSC TCGA-22-5474 4 13 Out-of-frame Inter-chr q34 q44 Transcription factor Seq+ 36298 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-THAP3 IGH@ chr14 106791003 - THAP3 chr1 6693617 + Exonic hg19 LUSC TCGA-22-5479 45 1 Out-of-frame Inter-chr 32.33 p36.31 Transcription factor 36299 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-THAP3 IGH@ chr14 106691671 - THAP3 chr1 6693617 + Exonic hg19 LUSC TCGA-22-5479 32 1 Out-of-frame Inter-chr 32.33 p36.31 Transcription factor 36300 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-THAP3 IGH@ chr14 106815720 - THAP3 chr1 6693617 + Exonic hg19 LUSC TCGA-22-5479 21 1 Out-of-frame Inter-chr 32.33 p36.31 Transcription factor 36301 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-THAP3 IGH@ chr14 107131031 - THAP3 chr1 6693617 + Exonic hg19 LUSC TCGA-22-5479 19 1 Out-of-frame Inter-chr 32.33 p36.31 Transcription factor 36302 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-THAP3 IGH@ chr14 106993812 - THAP3 chr1 6693617 + Exonic hg19 LUSC TCGA-22-5479 10 1 Out-of-frame Inter-chr 32.33 p36.31 Transcription factor 36303 ChimerSeq STARFusion TCGA_RNA-Seq AHCTF1-TFB2M AHCTF1 chr1 247005996 - TFB2M chr1 246729361 - Exonic hg19 LUSC TCGA-22-5479 3 13 Out-of-frame Intra-chr q44 Transcription factor q44 Seq+ 36304 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP1-IGKC ARHGAP1 chr11 46718742 - IGKC chr2 89161432 - Exonic hg19 LUSC TCGA-22-5479 6 1 Out-of-frame Inter-chr p11.2 p11.2 36305 ChimerSeq STARFusion TCGA_RNA-Seq BYSL-RPL7L1 BYSL chr6 41889568 + RPL7L1 chr6 42848599 + Exonic hg19 LUSC TCGA-22-5479 3 8 Out-of-frame Intra-chr p21.1 p21.1 36306 ChimerSeq STARFusion TCGA_RNA-Seq ACAP2-XXYLT1 ACAP2 chr3 195101738 - XXYLT1 chr3 194790840 - Exonic hg19 LUSC TCGA-22-5479 2 8 Out-of-frame Intra-chr q29 q29 Seq+ 36307 ChimerSeq STARFusion TCGA_RNA-Seq ZNF8-SSBP4 ZNF8 chr19 58790513 + SSBP4 chr19 18538161 + Exonic hg19 LUSC TCGA-22-5478 57 293 Out-of-frame Intra-chr q13.43 Transcription factor p13.11 Seq+ 36308 ChimerSeq STARFusion TCGA_RNA-Seq ZNF8-SSBP4 ZNF8 chr19 58790513 + SSBP4 chr19 18538161 + Exonic hg19 LUSC TCGA-22-5478 56 250 Out-of-frame Intra-chr q13.43 Transcription factor p13.11 Seq+ 36309 ChimerSeq STARFusion TCGA_RNA-Seq PLA2G4E-IGKC PLA2G4E chr15 42274286 - IGKC chr2 89161069 - Exonic hg19 LUSC TCGA-22-5478 104 0 Out-of-frame Inter-chr q15.1 p11.2 36310 ChimerSeq STARFusion TCGA_RNA-Seq PLA2G4E-IGKJ2 PLA2G4E chr15 42274286 - IGKJ2 chr2 89161069 - Exonic hg19 LUSC TCGA-22-5478 104 0 Out-of-frame Inter-chr q15.1 p11.2 36311 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2A-RPL28 GATAD2A chr19 19496947 + RPL28 chr19 55887279 + Exonic hg19 LUSC TCGA-22-5478 3 25 5'UTR-5'UTR Intra-chr p13.11 Transcription factor q13.42 Seq+ 36312 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2A-RPL28 GATAD2A chr19 19516828 + RPL28 chr19 55897718 + Exonic hg19 LUSC TCGA-22-5478 3 24 5'UTR-5'UTR Intra-chr p13.11 Transcription factor q13.42 Seq+ 36313 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2A-RPL28 GATAD2A chr19 19496947 + RPL28 chr19 55897718 + Exonic hg19 LUSC TCGA-22-5478 3 24 5'UTR-5'UTR Intra-chr p13.11 Transcription factor q13.42 Seq+ 36314 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2A-TMEM190 GATAD2A chr19 19496947 + TMEM190 chr19 55887279 + Exonic hg19 LUSC TCGA-22-5478 3 19 5'UTR-5'UTR Intra-chr p13.11 Transcription factor q13.42 36315 ChimerSeq STARFusion TCGA_RNA-Seq CLOCK-SRD5A3 CLOCK chr4 56308599 - SRD5A3 chr4 56225513 + Exonic hg19 LUSC TCGA-22-5478 4 14 In-Frame Intra-chr q12 Transcription factor q12 Seq+ 36316 ChimerSeq STARFusion TCGA_RNA-Seq RBM33-CDK14 RBM33 chr7 155567341 + CDK14 chr7 90613463 + Exonic hg19 LUSC TCGA-22-5478 3 7 In-Frame Intra-chr q36.3 q21.13 Seq+ 36317 ChimerSeq STARFusion TCGA_RNA-Seq MXRA8-CDK11A MXRA8 chr1 1293836 - CDK11A chr1 1654270 - Exonic hg19 LUSC TCGA-43-5670 70 192 CDS-5'UTR Intra-chr p36.33 p36.33 Seq+ 36318 ChimerSeq STARFusion TCGA_RNA-Seq ZNF532-MALT1 ZNF532 chr18 56621031 + MALT1 chr18 56400629 + Exonic hg19 LUSC TCGA-43-5670 13 64 Out-of-frame Intra-chr q21.32 Transcription factor q21.32 Oncogene Seq+ 36319 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-TLCD1 FAM222B chr17 27169700 - TLCD1 chr17 27051911 - Exonic hg19 LUSC TCGA-43-5670 6 49 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 36320 ChimerSeq STARFusion TCGA_RNA-Seq TNPO2-DNASE2 TNPO2 chr19 12816054 - DNASE2 chr19 12987177 - Exonic hg19 LUSC TCGA-43-5670 7 41 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 36321 ChimerSeq STARFusion TCGA_RNA-Seq CTIF-MOCOS CTIF chr18 46065683 + MOCOS chr18 33828885 + Exonic hg19 LUSC TCGA-43-5670 4 46 5'UTR-CDS Intra-chr q12.2 Seq+ 36322 ChimerSeq STARFusion TCGA_RNA-Seq CTIF-MOCOS CTIF chr18 46066202 + MOCOS chr18 33828885 + Exonic hg19 LUSC TCGA-43-5670 3 45 5'UTR-CDS Intra-chr q12.2 Seq+ 36323 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-TLCD1 FAM222B chr17 27169700 - TLCD1 chr17 27052581 - Exonic hg19 LUSC TCGA-43-5670 2 49 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 36324 ChimerSeq STARFusion TCGA_RNA-Seq CTIF-MOCOS CTIF chr18 46066202 + MOCOS chr18 33831122 + Exonic hg19 LUSC TCGA-43-5670 2 45 5'UTR-CDS Intra-chr q12.2 Seq+ 36325 ChimerSeq STARFusion TCGA_RNA-Seq CCDC88B-TEX40 CCDC88B chr11 64119858 + TEX40 chr11 64072015 + Exonic hg19 LUSC TCGA-43-5670 4 21 Out-of-frame Intra-chr q13.1 Seq+ 36326 ChimerSeq STARFusion TCGA_RNA-Seq CCDC88B-RELT CCDC88B chr11 64120333 + RELT chr11 73105042 + Exonic hg19 LUSC TCGA-43-5670 5 14 Out-of-frame Intra-chr q13.1 q13.4 Seq+ 36327 ChimerSeq STARFusion TCGA_RNA-Seq RELT-TEX40 RELT chr11 73105194 + TEX40 chr11 64072015 + Exonic hg19 LUSC TCGA-43-5670 3 15 Out-of-frame Intra-chr q13.4 Seq+ 36328 ChimerSeq STARFusion TCGA_RNA-Seq ABCG1-CCDC134 ABCG1 chr21 43714770 + CCDC134 chr22 42204879 + Exonic hg19 LUSC TCGA-43-5670 4 10 CDS-5'UTR Inter-chr q22.3 q13.2 Seq+ 36329 ChimerSeq STARFusion TCGA_RNA-Seq ZNF490-FARSA ZNF490 chr19 12719972 - FARSA chr19 13041563 - Exonic hg19 LUSC TCGA-43-5670 3 14 In-Frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 36330 ChimerSeq STARFusion TCGA_RNA-Seq ABCG1-MEI1 ABCG1 chr21 43714770 + MEI1 chr22 42195258 + Exonic hg19 LUSC TCGA-43-5670 2 6 In-Frame Inter-chr q22.3 q13.2 Seq+ 36331 ChimerSeq STARFusion TCGA_RNA-Seq AHNAK2-CD244 AHNAK2 chr14 105436793 - CD244 chr1 160811691 - Exonic hg19 LUSC TCGA-85-7844 10 4 Out-of-frame Inter-chr q32.33 q23.3 Seq+ 36332 ChimerSeq STARFusion TCGA_RNA-Seq PCID2-ATP4B PCID2 chr13 113862913 - ATP4B chr13 114309257 - Exonic hg19 LUSC TCGA-56-A4ZK 645 1566 Out-of-frame Intra-chr q34 q34 Seq+ 36333 ChimerSeq STARFusion TCGA_RNA-Seq TFDP1-LAMP1 TFDP1 chr13 114240164 + LAMP1 chr13 113973784 + Exonic hg19 LUSC TCGA-56-A4ZK 65 205 Out-of-frame Intra-chr q34 Transcription factor q34 Oncogene Seq+ 36334 ChimerSeq STARFusion TCGA_RNA-Seq PDIA5-OR7E29P PDIA5 chr3 122811289 + OR7E29P chr3 125431027 + Exonic hg19 LUSC TCGA-56-A4ZK 41 65 Out-of-frame Intra-chr q21.1 Seq+ 36335 ChimerSeq STARFusion TCGA_RNA-Seq CUL4A-TMEM255B CUL4A chr13 113897359 + TMEM255B chr13 114502312 + Exonic hg19 LUSC TCGA-56-A4ZK 19 106 Out-of-frame Intra-chr q34 Seq+ 36336 ChimerSeq STARFusion TCGA_RNA-Seq CUL4A-TMEM255B CUL4A chr13 113893865 + TMEM255B chr13 114502312 + Exonic hg19 LUSC TCGA-56-A4ZK 6 104 Out-of-frame Intra-chr q34 Seq+ 36337 ChimerSeq STARFusion TCGA_RNA-Seq LPCAT4-MTMR10 LPCAT4 chr15 34653407 - MTMR10 chr15 31231696 - Exonic hg19 LUSC TCGA-56-A4ZK 4 42 Out-of-frame Intra-chr q14 q13.3 Seq+ 36338 ChimerSeq STARFusion TCGA_RNA-Seq SEC22A-TXNRD3 SEC22A chr3 122944144 + TXNRD3 chr3 126352894 - Exonic hg19 LUSC TCGA-56-A4ZK 5 34 In-Frame Intra-chr q21.1 q21.3 Seq+ 36339 ChimerSeq STARFusion TCGA_RNA-Seq PDIA5-TXNRD3 PDIA5 chr3 122944144 + TXNRD3 chr3 126352894 - Exonic hg19 LUSC TCGA-56-A4ZK 3 28 3'UTR-CDS Intra-chr q21.1 q21.3 36340 ChimerSeq STARFusion TCGA_RNA-Seq CHAMP1-UNC79 CHAMP1 chr13 115080118 + UNC79 chr14 94103562 + Exonic hg19 LUSC TCGA-56-A4ZK 2 20 5'UTR-CDS Inter-chr q34 Transcription factor Seq+ 36341 ChimerSeq STARFusion TCGA_RNA-Seq GRK1-CUL4A GRK1 chr13 114321964 + CUL4A chr13 113862913 + Exonic hg19 LUSC TCGA-56-A4ZK 6 2 Out-of-frame Intra-chr q34 36342 ChimerSeq STARFusion TCGA_RNA-Seq TMUB1-AGAP3 TMUB1 chr7 150779262 - AGAP3 chr7 150825667 + Exonic hg19 LUSC TCGA-56-A4ZK 3 8 Out-of-frame Intra-chr q36.1 q36.1 Seq+ 36343 ChimerSeq STARFusion TCGA_RNA-Seq TFDP1-ATP4B TFDP1 chr13 114265377 + ATP4B chr13 114309257 - Exonic hg19 LUSC TCGA-56-A4ZK 2 11 In-Frame Intra-chr q34 Transcription factor q34 Seq+ 36344 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-PTPRF IGH@ chr14 107078376 - PTPRF chr1 44045377 + Exonic hg19 LUSC TCGA-56-A4ZK 3 5 Out-of-frame Inter-chr 32.33 p34.2 36345 ChimerSeq STARFusion TCGA_RNA-Seq SMYD2-PGBD2 SMYD2 chr1 214454770 + PGBD2 chr1 249208015 + Exonic hg19 LUSC TCGA-56-A4ZK 2 8 CDS-5'UTR Intra-chr q32.3 q44 Seq+ 36346 ChimerSeq STARFusion TCGA_RNA-Seq GGA1-IGH@ GGA1 chr22 38026110 + IGH@ chr14 106330832 - Exonic hg19 LUSC TCGA-43-A56U 103 1 Out-of-frame Inter-chr q13.1 32.33 36347 ChimerSeq STARFusion TCGA_RNA-Seq USP10-CDH13 USP10 chr16 84767109 + CDH13 chr16 83781713 + Exonic hg19 LUSC TCGA-43-A56U 17 61 Out-of-frame Intra-chr q24.1 q23.3 Tumor suppressor gene Seq+ 36348 ChimerSeq STARFusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23739998 - APOO chrX 23899069 - Exonic hg19 LUSC TCGA-43-A56U 8 27 In-Frame Intra-chr p22.11 p22.11 Seq+ 36349 ChimerSeq STARFusion TCGA_RNA-Seq SF1-EHD1 SF1 chr11 64543970 - EHD1 chr11 64627808 - Exonic hg19 LUSC TCGA-43-A56U 2 24 In-Frame Intra-chr q13.1 q13.1 Seq+ 36350 ChimerSeq STARFusion TCGA_RNA-Seq TUBBP5-SPRR4 TUBBP5 chr9 141044760 + SPRR4 chr1 152944347 + Exonic hg19 LUSC TCGA-43-A56U 3 9 5'UTR-5'UTR Inter-chr q34.3 q21.3 Seq+ 36351 ChimerSeq STARFusion TCGA_RNA-Seq ABHD17B-TMEM2 ABHD17B chr9 74525550 - TMEM2 chr9 74319719 - Exonic hg19 LUSC TCGA-43-A56V 5 11 Out-of-frame Intra-chr q21.13 q21.13 36352 ChimerSeq STARFusion TCGA_RNA-Seq VCL-ADK VCL chr10 75868914 + ADK chr10 76285014 + Exonic hg19 LUSC TCGA-43-A56V 2 21 In-Frame Intra-chr q22.2 q22.2 Seq+ 36353 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A24P1-NTNG1 SLC25A24P1 chr1 108826973 + NTNG1 chr1 107937776 + Exonic hg19 LUSC TCGA-43-A56V 3 11 Out-of-frame Intra-chr p13.3 p13.3 36354 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-BRD7P2 IGH@ chr14 107178820 - BRD7P2 chr3 159818749 + Exonic hg19 LUSC TCGA-56-7731 47 0 Out-of-frame Inter-chr 32.33 q25.33 36355 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106175004 - Exonic hg19 LUSC TCGA-56-7731 33 1 Out-of-frame Inter-chr q24.2 32.33 36356 ChimerSeq STARFusion TCGA_RNA-Seq NUSAP1-RTF1 NUSAP1 chr15 41625248 + RTF1 chr15 41745099 + Exonic hg19 LUSC TCGA-85-8072 3 25 In-Frame Intra-chr q15.1 q15.1 36357 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106175004 - Exonic hg19 LUSC TCGA-85-8072 3 3 Out-of-frame Inter-chr q24.2 32.33 36358 ChimerSeq STARFusion TCGA_RNA-Seq NPIPP1-CYFIP1 NPIPP1 chr16 15204271 - CYFIP1 chr15 22963755 + Exonic hg19 LUSC TCGA-85-8071 5 42 Out-of-frame Inter-chr p13.11 q11.2 36359 ChimerSeq STARFusion TCGA_RNA-Seq CHST9-DLGAP3 CHST9 chr18 24604080 - DLGAP3 chr1 35373038 - Exonic hg19 LUSC TCGA-85-8071 5 19 CDS-5'UTR Inter-chr q11.2 p34.3 Seq+ 36360 ChimerSeq STARFusion TCGA_RNA-Seq COL17A1-WDR96 COL17A1 chr10 105803259 - WDR96 chr10 105985315 - Exonic hg19 LUSC TCGA-85-8071 2 30 In-Frame Intra-chr q25.1 Seq+ 36361 ChimerSeq STARFusion TCGA_RNA-Seq BTAF1-MARCH5 BTAF1 chr10 93683847 + 2019_ 3_ 5_ chr10 94070892 + Exonic hg19 LUSC TCGA-85-8071 3 4 Out-of-frame Intra-chr q23.32 q23.32 Seq+ 36362 ChimerSeq STARFusion TCGA_RNA-Seq FAT2-ATOX1 FAT2 chr5 150921846 - ATOX1 chr5 151131340 - Exonic hg19 LUSC TCGA-85-8071 2 8 Out-of-frame Intra-chr q33.1 q33.1 Seq+ 36363 ChimerSeq STARFusion TCGA_RNA-Seq SEPT11-SHROOM3 SEPT11 chr4 77871083 + SHROOM3 chr4 77691779 + Exonic hg19 LUSC TCGA-68-8251 7 24 In-Frame Intra-chr q21.1 q21.1 36364 ChimerSeq STARFusion TCGA_RNA-Seq CSTF3-CCDC73 CSTF3 chr11 33182845 - CCDC73 chr11 32705120 - Exonic hg19 LUSC TCGA-68-8251 3 37 In-Frame Intra-chr p13 p13 Seq+ 36365 ChimerSeq STARFusion TCGA_RNA-Seq CTNND1-GYLTL1B CTNND1 chr11 57572252 + GYLTL1B chr11 45944372 + Exonic hg19 LUSC TCGA-68-8251 5 10 CDS-5'UTR Intra-chr q12.1 Tumor suppressor gene Seq+ 36366 ChimerSeq STARFusion TCGA_RNA-Seq PSMG2-PTPN2 PSMG2 chr18 12724618 + PTPN2 chr18 12825943 - Exonic hg19 LUSC TCGA-68-8251 2 8 In-Frame Intra-chr p11.21 p11.21 Tumor suppressor gene Seq+ 36367 ChimerSeq STARFusion TCGA_RNA-Seq SRPK1-CEP57L1 SRPK1 chr6 35810312 - CEP57L1 chr6 109481775 + Exonic hg19 LUSC TCGA-94-7033 30 79 Out-of-frame Intra-chr p21.31 CMGC:SRPK q21 Seq+ 36368 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-DSG1 CTTN chr11 70269101 + DSG1 chr18 28906544 + Exonic hg19 LUSC TCGA-94-7033 14 61 In-Frame Inter-chr q13.3 q12.1 Seq+ 36369 ChimerSeq STARFusion TCGA_RNA-Seq PPIA-KRT8 PPIA chr7 44841153 + KRT8 chr12 53343561 - Exonic hg19 LUSC TCGA-63-5128 43 1 Out-of-frame Inter-chr p13 q13.13 36370 ChimerSeq STARFusion TCGA_RNA-Seq RNASEH2A-BEST2 RNASEH2A chr19 12918320 + BEST2 chr19 12868465 + Exonic hg19 LUSC TCGA-63-5128 10 49 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 36371 ChimerSeq STARFusion TCGA_RNA-Seq KRT17-SMARCC1 KRT17 chr17 39740142 - SMARCC1 chr3 47626900 - Exonic hg19 LUSC TCGA-63-5128 5 3 Out-of-frame Inter-chr q21.2 p21.31 Tumor suppressor gene 36372 ChimerSeq STARFusion TCGA_RNA-Seq COL4A2-GAPDH COL4A2 chr13 111138107 + GAPDH chr12 6645663 + Exonic hg19 LUSC TCGA-63-5128 3 8 Out-of-frame Inter-chr q34 p13.31 36373 ChimerSeq STARFusion TCGA_RNA-Seq DIDO1-RPS4X DIDO1 chr20 61569148 - RPS4X chrX 71495574 - Exonic hg19 LUSC TCGA-43-3920 48 262 5'UTR-3'UTR Inter-chr q13.33 Tumor suppressor gene q13.1 Seq+ 36374 ChimerSeq STARFusion TCGA_RNA-Seq ART3-NUP54 ART3 chr4 77025122 + NUP54 chr4 77036647 - Exonic hg19 LUSC TCGA-43-3920 38 115 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 36375 ChimerSeq STARFusion TCGA_RNA-Seq ART3-NUP54 ART3 chr4 77025782 + NUP54 chr4 77036647 - Exonic hg19 LUSC TCGA-43-3920 10 103 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 36376 ChimerSeq STARFusion TCGA_RNA-Seq UNK-DPYD UNK chr17 73781065 + DPYD chr1 98039526 - Exonic hg19 LUSC TCGA-43-3920 7 67 Out-of-frame Inter-chr q25.1 p21.3 Oncogene Seq+ 36377 ChimerSeq STARFusion TCGA_RNA-Seq UNK-DPYD UNK chr17 73781065 + DPYD chr1 98058943 - Exonic hg19 LUSC TCGA-43-3920 2 67 Out-of-frame Inter-chr q25.1 p21.3 Oncogene Seq+ 36378 ChimerSeq STARFusion TCGA_RNA-Seq IRF5-IGKC IRF5 chr7 128587801 + IGKC chr2 89157198 - Exonic hg19 LUSC TCGA-43-3920 16 1 Out-of-frame Inter-chr q32.1 Tumor suppressor gene Transcription factor p11.2 36379 ChimerSeq STARFusion TCGA_RNA-Seq MED23-IGL@ MED23 chr6 131917271 - IGL@ chr22 23247171 + Exonic hg19 LUSC TCGA-43-3920 8 1 Out-of-frame Inter-chr q23.2 q11.22 36380 ChimerSeq STARFusion TCGA_RNA-Seq SMN1-SERF1A SMN1 chr5 70221011 + SERF1A chr5 70212768 + Exonic hg19 LUSC TCGA-43-3920 4 11 Out-of-frame Intra-chr q13.2 36381 ChimerSeq STARFusion TCGA_RNA-Seq RIPK1-SERPINB9 RIPK1 chr6 3064293 + SERPINB9 chr6 2900855 - Exonic hg19 LUSC TCGA-66-2777 4 5 5'UTR-5'UTR Intra-chr p25.2 TKL:RIPK p25.2 36382 ChimerSeq STARFusion TCGA_RNA-Seq SUMF2-PHKG1 SUMF2 chr7 56132071 + PHKG1 chr7 56149448 - Exonic hg19 LUSC TCGA-66-2777 3 9 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 36383 ChimerSeq STARFusion TCGA_RNA-Seq RNF19A-ANKRD46 RNF19A chr8 101322095 - ANKRD46 chr8 101545539 - Exonic hg19 LUSC TCGA-66-2771 13 16 5'UTR-5'UTR Intra-chr q22.2 q22.3 Seq+ 36384 ChimerSeq STARFusion TCGA_RNA-Seq EFNA3-FLAD1 EFNA3 chr1 155051545 + FLAD1 chr1 154965189 + Exonic hg19 LUSC TCGA-66-2771 8 22 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 36385 ChimerSeq STARFusion TCGA_RNA-Seq CLPTM1-CEACAM16 CLPTM1 chr19 45467018 + CEACAM16 chr19 45213768 + Exonic hg19 LUSC TCGA-66-2771 5 22 5'UTR-CDS Intra-chr q13.32 q13.31 Seq+ 36386 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPC-SUPT16H HNRNPC chr14 21698478 - SUPT16H chr14 21831308 - Exonic hg19 LUSC TCGA-66-2771 4 21 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 36387 ChimerSeq STARFusion TCGA_RNA-Seq CLPTM1-CEACAM16 CLPTM1 chr19 45465332 + CEACAM16 chr19 45213768 + Exonic hg19 LUSC TCGA-66-2771 3 21 Out-of-frame Intra-chr q13.32 q13.31 Seq+ 36388 ChimerSeq STARFusion TCGA_RNA-Seq ELMO1-IGH@ ELMO1 chr7 37025574 - IGH@ chr14 107170239 - Exonic hg19 LUSC TCGA-66-2771 6 1 Out-of-frame Inter-chr p14.1 32.33 36389 ChimerSeq STARFusion TCGA_RNA-Seq EFNA4-FLAD1 EFNA4 chr1 155039916 + FLAD1 chr1 154965189 + Exonic hg19 LUSC TCGA-66-2771 3 7 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 36390 ChimerSeq STARFusion TCGA_RNA-Seq RPS11-IGHG1 RPS11 chr19 50000565 + IGHG1 chr14 106208527 - Exonic hg19 LUSC TCGA-66-2771 3 7 Out-of-frame Inter-chr q13.33 q32.33 36391 ChimerSeq STARFusion TCGA_RNA-Seq ATG13-AMBRA1 ATG13 chr11 46671867 + AMBRA1 chr11 46570050 - Exonic hg19 LUSC TCGA-66-2771 3 6 CDS-5'UTR Intra-chr p11.2 p11.2 Seq+ 36392 ChimerSeq STARFusion TCGA_RNA-Seq UBE2D3-SLC9B1 UBE2D3 chr4 103789872 - SLC9B1 chr4 103832694 - Exonic hg19 LUSC TCGA-66-2771 2 10 Out-of-frame Intra-chr q24 q24 Seq+ 36393 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38075947 + MIPOL1 chr14 37892060 + Exonic hg19 LUSC TCGA-66-2771 2 8 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 36394 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38075947 + MIPOL1 chr14 37777261 + Exonic hg19 LUSC TCGA-66-2771 2 8 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 36395 ChimerSeq STARFusion TCGA_RNA-Seq SMARCA4-C19orf38 SMARCA4 chr19 11101999 + C19orf38 chr19 10979894 + Exonic hg19 LUSC TCGA-66-2771 2 4 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 36396 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-MATR3 IGH@ chr14 106494138 - MATR3 chr5 138667213 + Exonic hg19 LUSC TCGA-66-2773 11 1 Out-of-frame Inter-chr 32.33 q31.2 36397 ChimerSeq STARFusion TCGA_RNA-Seq ZNF625-SCAMP4 ZNF625 chr19 12267371 - SCAMP4 chr19 1914978 + Exonic hg19 LUSC TCGA-66-2773 2 23 CDS-5'UTR Intra-chr p13.2 Transcription factor p13.3 Seq+ 36398 ChimerSeq STARFusion TCGA_RNA-Seq RAB14-C5 RAB14 chr9 123963917 - C5 chr9 123753558 - Exonic hg19 LUSC TCGA-77-8150 6 33 5'UTR-CDS Intra-chr q33.2 q33.2 Seq+ 36399 ChimerSeq STARFusion TCGA_RNA-Seq RAB14-C5 RAB14 chr9 123963917 - C5 chr9 123752058 - Exonic hg19 LUSC TCGA-77-8150 2 32 5'UTR-CDS Intra-chr q33.2 q33.2 Seq+ 36400 ChimerSeq STARFusion TCGA_RNA-Seq TPCN2-TMEM179B TPCN2 chr11 68816574 + TMEM179B chr11 62556495 + Exonic hg19 LUSC TCGA-77-8009 21 47 Out-of-frame Intra-chr q13.3 q12.3 Seq+ 36401 ChimerSeq STARFusion TCGA_RNA-Seq RRM2B-ZNF704 RRM2B chr8 103231042 - ZNF704 chr8 81555364 - Exonic hg19 LUSC TCGA-77-8009 16 38 In-Frame Intra-chr q22.3 q21.13 Transcription factor Seq+ 36402 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-RALYL TPD52 chr8 81083660 - RALYL chr8 85785519 + Exonic hg19 LUSC TCGA-77-8009 14 20 In-Frame Intra-chr q21.13 q21.2 Seq+ 36403 ChimerSeq STARFusion TCGA_RNA-Seq DST-PRKRIR DST chr6 56382365 - PRKRIR chr11 76063838 - Exonic hg19 LUSC TCGA-77-8009 7 2 Out-of-frame Inter-chr p12.1 Oncogene 36404 ChimerSeq STARFusion TCGA_RNA-Seq RAB40C-MYH11 RAB40C chr16 668260 + MYH11 chr16 15917268 - Exonic hg19 LUSC TCGA-77-8009 5 5 In-Frame Intra-chr p13.3 Oncogene Seq+ 36405 ChimerSeq STARFusion TCGA_RNA-Seq RNF130-DNAJC19 RNF130 chr5 179467453 - DNAJC19 chr3 180706017 - Exonic hg19 LUSC TCGA-77-8009 4 5 Out-of-frame Inter-chr q35.3 q26.33 Seq+ 36406 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG3 STK25 chr2 242434915 - IGHG3 chr14 106237745 - Exonic hg19 LUSC TCGA-56-5897 175 1 Out-of-frame Inter-chr q37.3 36407 ChimerSeq STARFusion TCGA_RNA-Seq XAB2-IGL@ XAB2 chr19 7692209 - IGL@ chr22 23241799 + Exonic hg19 LUSC TCGA-56-5897 36 1 Out-of-frame Inter-chr p13.2 q11.22 36408 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT4-ACSL5 B4GALT4 chr3 118945656 - ACSL5 chr10 114182083 + Exonic hg19 LUSC TCGA-56-5897 17 53 In-Frame Inter-chr q13.32 q25.2 Seq+ 36409 ChimerSeq STARFusion TCGA_RNA-Seq LIMS1-IGL@ LIMS1 chr2 109276408 + IGL@ chr22 23247168 + Exonic hg19 LUSC TCGA-56-5897 28 1 Out-of-frame Inter-chr q12.3 q11.22 36410 ChimerSeq STARFusion TCGA_RNA-Seq C17orf70-NPLOC4 C17orf70 chr17 79511030 - NPLOC4 chr17 79532633 - Exonic hg19 LUSC TCGA-56-5897 11 50 In-Frame Intra-chr q25.3 Seq+ 36411 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-PLXNA1 IGL@ chr22 23101692 + PLXNA1 chr3 126710366 + Exonic hg19 LUSC TCGA-56-5897 19 1 Out-of-frame Inter-chr q11.22 q21.3 36412 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-NOTCH1 IGHG1 chr14 106134591 - NOTCH1 chr9 139403429 - Exonic hg19 LUSC TCGA-56-5897 11 2 Out-of-frame Inter-chr q32.33 q34.3 Oncogene Tumor suppressor gene 36413 ChimerSeq STARFusion TCGA_RNA-Seq C22orf39-IGHA2 C22orf39 chr22 19344506 - IGHA2 chr14 106054734 - Exonic hg19 LUSC TCGA-56-5897 10 0 Out-of-frame Inter-chr q11.21 36414 ChimerSeq STARFusion TCGA_RNA-Seq HIRA-IGHA2 HIRA chr22 19344506 - IGHA2 chr14 106054734 - Exonic hg19 LUSC TCGA-56-5897 10 0 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 36415 ChimerSeq STARFusion TCGA_RNA-Seq PKM-IGL@ PKM chr15 72502184 - IGL@ chr22 23241804 + Exonic hg19 LUSC TCGA-56-5897 5 10 Out-of-frame Inter-chr q23 q11.22 36416 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-S100A9 IGHG1 chr14 106208230 - S100A9 chr1 153333303 + Exonic hg19 LUSC TCGA-56-5897 3 7 Out-of-frame Inter-chr q32.33 q21.3 36417 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57763169 + VMP1 chr17 57886157 + Exonic hg19 LUSC TCGA-77-8007 16 18 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 36418 ChimerSeq STARFusion TCGA_RNA-Seq OPA1-PPP2R3A OPA1 chr3 193385069 + PPP2R3A chr3 135863885 + Exonic hg19 LUSC TCGA-94-7943 13 21 Out-of-frame Intra-chr q29 q22.2 Seq+ 36419 ChimerSeq STARFusion TCGA_RNA-Seq ERICH1-IYD ERICH1 chr8 618598 - IYD chr6 150710488 + Exonic hg19 LUSC TCGA-94-7943 10 18 In-Frame Inter-chr q25.1 Seq+ 36420 ChimerSeq STARFusion TCGA_RNA-Seq EHBP1L1-FRMD8 EHBP1L1 chr11 65353062 + FRMD8 chr11 65178713 + Exonic hg19 LUSC TCGA-94-7943 7 5 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 36421 ChimerSeq STARFusion TCGA_RNA-Seq PHC3-SLC7A14 PHC3 chr3 169854207 - SLC7A14 chr3 170185165 - Exonic hg19 LUSC TCGA-94-7943 2 21 In-Frame Intra-chr q26.2 Tumor suppressor gene q26.2 Seq+ 36422 ChimerSeq STARFusion TCGA_RNA-Seq TLK2-BCAS3 TLK2 chr17 60558567 + BCAS3 chr17 58945937 + Exonic hg19 LUSC TCGA-94-7943 2 19 Out-of-frame Intra-chr q23.2 Other:TLK q23.2 Seq+ 36423 ChimerSeq STARFusion TCGA_RNA-Seq GSR-OTOA GSR chr8 30550486 - OTOA chr16 21771791 + Exonic hg19 LUSC TCGA-94-7943 5 6 Out-of-frame Inter-chr p12 p12.2 Seq+ 36424 ChimerSeq STARFusion TCGA_RNA-Seq ARID2-SPSB2 ARID2 chr12 46205334 + SPSB2 chr12 6991451 - Exonic hg19 LUSC TCGA-94-7943 3 7 CDS-5'UTR Intra-chr q12 Oncogene Tumor suppressor gene Transcription factor p13.31 Seq+ 36425 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-DHDDS IGH@ chr14 107218679 - DHDDS chr1 26797540 + Exonic hg19 LUSC TCGA-66-2780 29 1 Out-of-frame Inter-chr 32.33 p36.11 36426 ChimerSeq STARFusion TCGA_RNA-Seq HIRA-IGHGP HIRA chr22 19344505 - IGHGP chr14 106136183 - Exonic hg19 LUSC TCGA-66-2780 22 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 36427 ChimerSeq STARFusion TCGA_RNA-Seq C11orf48-IGKC C11orf48 chr11 62432632 - IGKC chr2 89161432 - Exonic hg19 LUSC TCGA-66-2780 17 1 Out-of-frame Inter-chr p11.2 36428 ChimerSeq STARFusion TCGA_RNA-Seq ITPRIPL2-RN7SL2 ITPRIPL2 chr16 19131482 + RN7SL2 chr14 50329501 - Exonic hg19 LUSC TCGA-66-2780 4 26 Out-of-frame Inter-chr p12.3 q21.3 36429 ChimerSeq STARFusion TCGA_RNA-Seq HIRA-IGHGP HIRA chr22 19344505 - IGHGP chr14 106209409 - Exonic hg19 LUSC TCGA-66-2780 10 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 36430 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57746301 + VMP1 chr17 57886157 + Exonic hg19 LUSC TCGA-66-2781 55 274 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 36431 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57763169 + VMP1 chr17 57895073 + Exonic hg19 LUSC TCGA-66-2781 23 271 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 36432 ChimerSeq STARFusion TCGA_RNA-Seq ALDH18A1-PDLIM1 ALDH18A1 chr10 97416354 - PDLIM1 chr10 97031541 - Exonic hg19 LUSC TCGA-66-2781 20 110 5'UTR-CDS Intra-chr q24.1 q23.33 Seq+ 36433 ChimerSeq STARFusion TCGA_RNA-Seq FOXK2-TBCD FOXK2 chr17 80478183 + TBCD chr17 80772716 + Exonic hg19 LUSC TCGA-66-2781 29 73 In-Frame Intra-chr q25.3 Transcription factor Seq+ 36434 ChimerSeq STARFusion TCGA_RNA-Seq CDK13-C7orf10 CDK13 chr7 40118450 + C7orf10 chr7 40723655 + Exonic hg19 LUSC TCGA-66-2781 4 60 Out-of-frame Intra-chr p14.1 Seq+ 36435 ChimerSeq STARFusion TCGA_RNA-Seq CDK13-C7orf10 CDK13 chr7 40118450 + C7orf10 chr7 40789033 + Exonic hg19 LUSC TCGA-66-2781 2 60 Out-of-frame Intra-chr p14.1 Seq+ 36436 ChimerSeq STARFusion TCGA_RNA-Seq FNIP2-IGHG1 FNIP2 chr4 159757025 + IGHG1 chr14 106209409 - Exonic hg19 LUSC TCGA-66-2781 11 0 Out-of-frame Inter-chr q32.1 q32.33 36437 ChimerSeq STARFusion TCGA_RNA-Seq KYNU-ARHGAP15 KYNU chr2 143787248 + ARHGAP15 chr2 144381702 + Exonic hg19 LUSC TCGA-66-2781 5 24 In-Frame Intra-chr q22.2 q22.2 36438 ChimerSeq STARFusion TCGA_RNA-Seq CDC42EP4-SEPT10 CDC42EP4 chr17 71308032 - SEPT10 chr2 110350696 - Exonic hg19 LUSC TCGA-66-2782 10 44 5'UTR-CDS Inter-chr q25.1 q13 Seq+ 36439 ChimerSeq STARFusion TCGA_RNA-Seq CISD1-GABRA1 CISD1 chr10 60029064 + GABRA1 chr5 161322672 + Exonic hg19 LUSC TCGA-66-2782 8 26 In-Frame Inter-chr q21.1 q34 Seq+ 36440 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0100-IGH@ KIAA0100 chr17 26967531 - IGH@ chr14 106330071 - Exonic hg19 LUSC TCGA-66-2782 10 1 Out-of-frame Inter-chr q11.2 32.33 36441 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1D-SCPEP1 CSNK1D chr17 80231182 - SCPEP1 chr17 55072868 + Exonic hg19 LUSC TCGA-66-2783 26 124 Out-of-frame Intra-chr q25.3 q22 Seq+ 36442 ChimerSeq STARFusion TCGA_RNA-Seq ST13-IGH@ ST13 chr22 41231518 - IGH@ chr14 106330842 - Exonic hg19 LUSC TCGA-66-2783 54 2 Out-of-frame Inter-chr q13.2 Tumor suppressor gene 32.33 36443 ChimerSeq STARFusion TCGA_RNA-Seq VEZF1-DDX42 VEZF1 chr17 56065440 - DDX42 chr17 61864394 + Exonic hg19 LUSC TCGA-66-2783 16 72 CDS-5'UTR Intra-chr q22 Transcription factor q23.3 Seq+ 36444 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106209410 - Exonic hg19 LUSC TCGA-66-2783 32 1 Out-of-frame Inter-chr q24.2 32.33 36445 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG3 GAS6 chr13 114525073 - IGHG3 chr14 106237746 - Exonic hg19 LUSC TCGA-66-2783 15 0 Out-of-frame Inter-chr q34 Oncogene 36446 ChimerSeq STARFusion TCGA_RNA-Seq MROH1-TCTEX1D2 MROH1 chr8 145218751 + TCTEX1D2 chr3 196033883 - Exonic hg19 LUSC TCGA-66-2785 6 12 Out-of-frame Inter-chr q24.3 q29 Seq+ 36447 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 LUSC TCGA-66-2786 2357 6097 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 36448 ChimerSeq STARFusion TCGA_RNA-Seq CHD8-TOX4 CHD8 chr14 21867761 - TOX4 chr14 21944736 + Exonic hg19 LUSC TCGA-66-2786 3 6 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 36449 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-GRAMD1A IGH@ chr14 107034730 - GRAMD1A chr19 35491238 + Exonic hg19 LUSC TCGA-66-2787 10 2 Out-of-frame Inter-chr 32.33 q13.11 36450 ChimerSeq STARFusion TCGA_RNA-Seq SMAD3-C15orf61 SMAD3 chr15 67358698 + C15orf61 chr15 67811340 + Exonic hg19 LUSC TCGA-66-2787 4 10 CDS-5'UTR Intra-chr q22.33 Transcription factor q23 36451 ChimerSeq STARFusion TCGA_RNA-Seq COL6A3-IGH@ COL6A3 chr2 238252468 - IGH@ chr14 106331650 - Exonic hg19 LUSC TCGA-66-2787 5 5 Out-of-frame Inter-chr q37.3 32.33 36452 ChimerSeq STARFusion TCGA_RNA-Seq COL6A3-IGHG3 COL6A3 chr2 238252468 - IGHG3 chr14 106331650 - Exonic hg19 LUSC TCGA-66-2787 5 4 Out-of-frame Inter-chr q37.3 36453 ChimerSeq STARFusion TCGA_RNA-Seq BAP1-IGHG3 BAP1 chr3 52443953 - IGHG3 chr14 106330840 - Exonic hg19 LUSC TCGA-66-2788 38 2 Out-of-frame Inter-chr p21.1 Oncogene Tumor suppressor gene 36454 ChimerSeq STARFusion TCGA_RNA-Seq BAP1-IGHJ3 BAP1 chr3 52443953 - IGHJ3 chr14 106330840 - Exonic hg19 LUSC TCGA-66-2788 38 0 Out-of-frame Inter-chr p21.1 Oncogene Tumor suppressor gene q32.33 Seq+ 36455 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGHG1 HOMER2 chr15 83561493 - IGHG1 chr14 106209410 - Exonic hg19 LUSC TCGA-66-2788 21 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene q32.33 36456 ChimerSeq STARFusion TCGA_RNA-Seq COASY-IGHA1 COASY chr17 40714608 + IGHA1 chr14 106175004 - Exonic hg19 LUSC TCGA-66-2788 20 0 Out-of-frame Inter-chr q21.2 36457 ChimerSeq STARFusion TCGA_RNA-Seq ATG5-SYNJ2 ATG5 chr6 106763976 - SYNJ2 chr6 158502141 + Exonic hg19 LUSC TCGA-66-2788 5 34 Out-of-frame Intra-chr q21 q25.3 Seq+ 36458 ChimerSeq STARFusion TCGA_RNA-Seq VCAN-CNTNAP3B VCAN chr5 82789750 + CNTNAP3B chr9 43815785 + Exonic hg19 LUSC TCGA-66-2788 8 19 In-Frame Inter-chr q14.2 p11.2 36459 ChimerSeq STARFusion TCGA_RNA-Seq TULP4-ESR1 TULP4 chr6 158735300 + ESR1 chr6 152201790 + Exonic hg19 LUSC TCGA-66-2788 9 14 Out-of-frame Intra-chr q25.3 q25.1 Oncogene Tumor suppressor gene Transcription factor Seq+ 36460 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-TFB1M ESR1 chr6 152265643 + TFB1M chr6 155581534 - Exonic hg19 LUSC TCGA-66-2788 5 14 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.3 Seq+ 36461 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-CNOT3 IGL@ chr22 23223570 + CNOT3 chr19 54656355 + Exonic hg19 LUSC TCGA-66-2788 8 1 Out-of-frame Inter-chr q11.22 Tumor suppressor gene 36462 ChimerSeq STARFusion TCGA_RNA-Seq CAND1-IGHG3 CAND1 chr12 67711635 + IGHG3 chr14 106330468 - Exonic hg19 LUSC TCGA-66-2788 7 2 Out-of-frame Inter-chr q14.3 36463 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGHG1 TET3 chr2 74329258 + IGHG1 chr14 106209408 - Exonic hg19 LUSC TCGA-66-2788 7 2 Out-of-frame Inter-chr p13.1 Transcription factor q32.33 36464 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGHG1 TET3 chr2 74329258 + IGHG1 chr14 106237743 - Exonic hg19 LUSC TCGA-66-2788 6 2 Out-of-frame Inter-chr p13.1 Transcription factor q32.33 36465 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LUSC TCGA-66-2788 3 8 In-Frame Intra-chr p13.3 p13.3 36466 ChimerSeq STARFusion TCGA_RNA-Seq RPTOR-STXBP4 RPTOR chr17 78882729 + STXBP4 chr17 53155439 + Exonic hg19 LUSC TCGA-66-2788 3 7 In-Frame Intra-chr q25.3 q22 Seq+ 36467 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF4-HM13 TM9SF4 chr20 30747914 + HM13 chr20 30154013 + Exonic hg19 LUSC TCGA-66-2789 22 130 In-Frame Intra-chr q11.21 q11.21 Seq+ 36468 ChimerSeq STARFusion TCGA_RNA-Seq RAB30-PRCP RAB30 chr11 82782733 - PRCP chr11 82571159 - Exonic hg19 LUSC TCGA-66-2789 15 134 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 36469 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF4-HM13 TM9SF4 chr20 30746317 + HM13 chr20 30154013 + Exonic hg19 LUSC TCGA-66-2789 7 127 In-Frame Intra-chr q11.21 q11.21 Seq+ 36470 ChimerSeq STARFusion TCGA_RNA-Seq RAB30-PRCP RAB30 chr11 82745214 - PRCP chr11 82571159 - Exonic hg19 LUSC TCGA-66-2789 2 132 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 36471 ChimerSeq STARFusion TCGA_RNA-Seq LIN54-TMEM150C LIN54 chr4 83852096 - TMEM150C chr4 83425820 - Exonic hg19 LUSC TCGA-66-2789 4 16 CDS-5'UTR Intra-chr q21.22 Transcription factor q21.22 36472 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-IGH@ WHSC1L1 chr8 38174983 - IGH@ chr14 106330842 - Exonic hg19 LUSC TCGA-66-2789 7 4 Out-of-frame Inter-chr p11.23 Tumor suppressor gene 32.33 36473 ChimerSeq STARFusion TCGA_RNA-Seq GPC1-ANKFN1 GPC1 chr2 241375501 + ANKFN1 chr17 54428127 + Exonic hg19 LUSC TCGA-66-2789 5 11 Out-of-frame Inter-chr q37.3 q22 Seq+ 36474 ChimerSeq STARFusion TCGA_RNA-Seq FAM83F-FST FAM83F chr22 40422050 + FST chr5 52782785 + Exonic hg19 LUSC TCGA-51-4081 3 16 Out-of-frame Inter-chr q13.1 q11.2 Seq+ 36475 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG3 STK25 chr2 242434915 - IGHG3 chr14 106237745 - Exonic hg19 LUSC TCGA-85-A511 57 1 Out-of-frame Inter-chr q37.3 36476 ChimerSeq STARFusion TCGA_RNA-Seq MDGA1-IGKC MDGA1 chr6 37631796 - IGKC chr2 89160769 - Exonic hg19 LUSC TCGA-85-A511 46 1 Out-of-frame Inter-chr p21.2 p11.2 36477 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGH@ INTS1 chr7 1511982 - IGH@ chr14 106237746 - Exonic hg19 LUSC TCGA-85-A511 15 1 Out-of-frame Inter-chr p22.3 32.33 36478 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGHG3 INTS1 chr7 1511982 - IGHG3 chr14 106237746 - Exonic hg19 LUSC TCGA-85-A511 15 1 Out-of-frame Inter-chr p22.3 36479 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGH@ INTS1 chr7 1511982 - IGH@ chr14 106209411 - Exonic hg19 LUSC TCGA-85-A511 14 1 Out-of-frame Inter-chr p22.3 32.33 36480 ChimerSeq STARFusion TCGA_RNA-Seq TMEM87B-MERTK TMEM87B chr2 112813333 + MERTK chr2 112751828 + Exonic hg19 LUSC TCGA-85-A511 7 26 In-Frame Intra-chr q13 q13 Seq+ 36481 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGH@ INTS1 chr7 1511982 - IGH@ chr14 106136185 - Exonic hg19 LUSC TCGA-85-A511 11 1 Out-of-frame Inter-chr p22.3 32.33 36482 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGH@ INTS1 chr7 1511982 - IGH@ chr14 106092406 - Exonic hg19 LUSC TCGA-85-A511 9 1 Out-of-frame Inter-chr p22.3 32.33 36483 ChimerSeq STARFusion TCGA_RNA-Seq GBA-IGKC GBA chr1 155207885 - IGKC chr2 89160117 - Exonic hg19 LUSC TCGA-85-A511 8 1 Out-of-frame Inter-chr p11.2 36484 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-PTK7 IGH@ chr14 106714573 - PTK7 chr6 43100431 + Exonic hg19 LUSC TCGA-85-A511 6 3 Out-of-frame Inter-chr 32.33 p21.1 36485 ChimerSeq STARFusion TCGA_RNA-Seq PPRC1-IGKC PPRC1 chr10 103901438 + IGKC chr2 89157198 - Exonic hg19 LUSC TCGA-85-A511 5 2 Out-of-frame Inter-chr q24.32 p11.2 36486 ChimerSeq STARFusion TCGA_RNA-Seq RNF121-PPP6R3 RNF121 chr11 71640170 + PPP6R3 chr11 68334482 + Exonic hg19 LUSC TCGA-85-A511 3 8 In-Frame Intra-chr q13.4 q13.2 Seq+ 36487 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K10-C19orf47 MAP3K10 chr19 40715126 + C19orf47 chr19 40847797 - Exonic hg19 LUSC TCGA-85-A510 73 217 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 36488 ChimerSeq STARFusion TCGA_RNA-Seq AKT2-MAP3K10 AKT2 chr19 40791088 - MAP3K10 chr19 40711818 + Exonic hg19 LUSC TCGA-85-A510 33 199 5'UTR-CDS Intra-chr q13.2 AGC:Akt Oncogene q13.2 Seq+ 36489 ChimerSeq STARFusion TCGA_RNA-Seq AKT2-MAP3K10 AKT2 chr19 40791088 - MAP3K10 chr19 40715010 + Exonic hg19 LUSC TCGA-85-A510 14 199 5'UTR-CDS Intra-chr q13.2 AGC:Akt Oncogene q13.2 Seq+ 36490 ChimerSeq STARFusion TCGA_RNA-Seq CTTNBP2NL-CAPZA1 CTTNBP2NL chr1 112958886 + CAPZA1 chr1 113212165 + Exonic hg19 LUSC TCGA-18-3407 35 133 In-Frame Intra-chr p13.2 p13.2 Seq+ 36491 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-EPHB3 IGL@ chr22 22764603 + EPHB3 chr3 184295760 + Exonic hg19 LUSC TCGA-18-3407 20 1 Out-of-frame Inter-chr q11.22 q27.1 Tumor suppressor gene 36492 ChimerSeq STARFusion TCGA_RNA-Seq GRPEL2-IGL@ GRPEL2 chr5 148725306 + IGL@ chr22 23248510 + Exonic hg19 LUSC TCGA-18-3407 20 0 Out-of-frame Inter-chr q32 q11.22 36493 ChimerSeq STARFusion TCGA_RNA-Seq GRPEL2-IGLC2 GRPEL2 chr5 148725306 + IGLC2 chr22 23243154 + Exonic hg19 LUSC TCGA-18-3407 20 0 Out-of-frame Inter-chr q32 q11.22 36494 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGH@ TET3 chr2 74329257 + IGH@ chr14 106209409 - Exonic hg19 LUSC TCGA-18-3407 13 1 Out-of-frame Inter-chr p13.1 Transcription factor 32.33 36495 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGH@ TET3 chr2 74329257 + IGH@ chr14 106136183 - Exonic hg19 LUSC TCGA-18-3407 11 1 Out-of-frame Inter-chr p13.1 Transcription factor 32.33 36496 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGHG2 TET3 chr2 74329257 + IGHG2 chr14 106111128 - Exonic hg19 LUSC TCGA-18-3407 11 1 Out-of-frame Inter-chr p13.1 Transcription factor 36497 ChimerSeq STARFusion TCGA_RNA-Seq FNBP4-IGH@ FNBP4 chr11 47741480 - IGH@ chr14 106331458 - Exonic hg19 LUSC TCGA-18-3407 7 1 Out-of-frame Inter-chr p11.2 32.33 36498 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGHG2 TET3 chr2 74329257 + IGHG2 chr14 106136183 - Exonic hg19 LUSC TCGA-18-3407 6 1 Out-of-frame Inter-chr p13.1 Transcription factor 36499 ChimerSeq STARFusion TCGA_RNA-Seq DENND1B-RGL1 DENND1B chr1 197741998 - RGL1 chr1 183666538 + Exonic hg19 LUSC TCGA-18-3407 3 11 CDS-5'UTR Intra-chr q31.3 q25.3 Seq+ 36500 ChimerSeq STARFusion TCGA_RNA-Seq POTEM-IGH@ POTEM chr14 19984951 - IGH@ chr14 106330465 - Exonic hg19 LUSC TCGA-18-3406 46 1 Out-of-frame Intra-chr q11.2 32.33 36501 ChimerSeq STARFusion TCGA_RNA-Seq AFG3L2-IGKC AFG3L2 chr18 12358734 - IGKC chr2 89157199 - Exonic hg19 LUSC TCGA-18-3406 20 1 Out-of-frame Inter-chr p11.21 p11.2 36502 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106111129 - Exonic hg19 LUSC TCGA-18-3406 9 1 Out-of-frame Inter-chr q37.3 36503 ChimerSeq STARFusion TCGA_RNA-Seq PAPSS2-PTEN PAPSS2 chr10 89419765 + PTEN chr10 89685270 + Exonic hg19 LUSC TCGA-18-3406 2 20 Out-of-frame Intra-chr q23.2 q23.31 Oncogene Tumor suppressor gene Seq+ 36504 ChimerSeq STARFusion TCGA_RNA-Seq MSI1-IGH@ MSI1 chr12 120794732 - IGH@ chr14 106330832 - Exonic hg19 LUSC TCGA-18-3406 6 1 Out-of-frame Inter-chr q24.31 32.33 36505 ChimerSeq STARFusion TCGA_RNA-Seq MSI1-IGHG3 MSI1 chr12 120794732 - IGHG3 chr14 106330832 - Exonic hg19 LUSC TCGA-18-3406 6 1 Out-of-frame Inter-chr q24.31 36506 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SDC1 IGH@ chr14 106090947 - SDC1 chr2 20402207 - Exonic hg19 LUSC TCGA-18-3406 3 11 Out-of-frame Inter-chr 32.33 p24.1 36507 ChimerSeq STARFusion TCGA_RNA-Seq NOL12-GGA1 NOL12 chr22 38082482 + GGA1 chr22 38026005 + Exonic hg19 LUSC TCGA-18-3406 2 6 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 36508 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-TRIB1 PVT1 chr8 128806980 + TRIB1 chr8 126448248 + Exonic hg19 LUSC TCGA-43-8116 602 2984 5'UTR-CDS Intra-chr q24.21 q24.13 Seq+ 36509 ChimerSeq STARFusion TCGA_RNA-Seq PITPNA-PRPF8 PITPNA chr17 1456298 - PRPF8 chr17 1557310 - Exonic hg19 LUSC TCGA-43-8116 30 267 In-Frame Intra-chr p13.3 Seq+ 36510 ChimerSeq STARFusion TCGA_RNA-Seq TRIB1-CCDC26 TRIB1 chr8 126445851 + CCDC26 chr8 130411930 - Exonic hg19 LUSC TCGA-43-8116 16 78 Out-of-frame Intra-chr q24.13 q24.21 36511 ChimerSeq STARFusion TCGA_RNA-Seq CDK13-C7orf10 CDK13 chr7 40027857 + C7orf10 chr7 40789033 + Exonic hg19 LUSC TCGA-43-8116 3 76 Out-of-frame Intra-chr p14.1 Seq+ 36512 ChimerSeq STARFusion TCGA_RNA-Seq TRIB1-CCDC26 TRIB1 chr8 126445851 + CCDC26 chr8 130365226 - Exonic hg19 LUSC TCGA-43-8116 2 78 Out-of-frame Intra-chr q24.13 q24.21 36513 ChimerSeq STARFusion TCGA_RNA-Seq AGFG1-MFF AGFG1 chr2 228337304 + MFF chr2 228220393 + Exonic hg19 LUSC TCGA-43-8116 2 18 In-Frame Intra-chr q36.3 q36.3 Seq+ 36514 ChimerSeq STARFusion TCGA_RNA-Seq ATG7-ARMC3 ATG7 chr3 11406208 + ARMC3 chr10 23319525 + Exonic hg19 LUSC TCGA-43-8116 4 7 Out-of-frame Inter-chr p25.3 p12.2 Seq+ 36515 ChimerSeq STARFusion TCGA_RNA-Seq SCARB2-IGL@ SCARB2 chr4 77087898 - IGL@ chr22 23247168 + Exonic hg19 LUSC TCGA-43-8116 5 1 Out-of-frame Inter-chr q21.1 q11.22 36516 ChimerSeq STARFusion TCGA_RNA-Seq SCARB2-IGLC3 SCARB2 chr4 77087898 - IGLC3 chr22 23247168 + Exonic hg19 LUSC TCGA-43-8116 5 1 Out-of-frame Inter-chr q21.1 q11.22 36517 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LUSC TCGA-43-8116 4 1 In-Frame Intra-chr p13.3 p13.3 36518 ChimerSeq STARFusion TCGA_RNA-Seq STT3A-IGHG3 STT3A chr11 125463189 + IGHG3 chr14 106330070 - Exonic hg19 LUSC TCGA-43-8116 4 1 Out-of-frame Inter-chr q24.2 36519 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-RPS27 IGH@ chr14 106725200 - RPS27 chr1 153963240 + Exonic hg19 LUSC TCGA-43-8115 28 1 Out-of-frame Inter-chr 32.33 q21.3 36520 ChimerSeq STARFusion TCGA_RNA-Seq CAMSAP2-CARS CAMSAP2 chr1 200824017 + CARS chr11 3022478 - Exonic hg19 LUSC TCGA-43-8115 5 25 In-Frame Inter-chr q32.1 Seq+ 36521 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R12A-XRCC6BP1 PPP1R12A chr12 80239082 - XRCC6BP1 chr12 58339411 + Exonic hg19 LUSC TCGA-43-8115 4 23 In-Frame Intra-chr q21.31 Seq+ 36522 ChimerSeq STARFusion TCGA_RNA-Seq EGLN1-PTPRF EGLN1 chr1 231556744 - PTPRF chr1 44083116 + Exonic hg19 LUSC TCGA-43-8115 4 18 In-Frame Intra-chr q42.2 Tumor suppressor gene p34.2 Seq+ 36523 ChimerSeq STARFusion TCGA_RNA-Seq CDC42EP4-SDK2 CDC42EP4 chr17 71308032 - SDK2 chr17 71348776 - Exonic hg19 LUSC TCGA-43-8115 5 7 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 36524 ChimerSeq STARFusion TCGA_RNA-Seq BIRC6-YIPF4 BIRC6 chr2 32582554 + YIPF4 chr2 32515552 + Exonic hg19 LUSC TCGA-43-8115 3 10 In-Frame Intra-chr p22.3 p22.3 Seq+ 36525 ChimerSeq STARFusion TCGA_RNA-Seq TFRC-TCTEX1D2 TFRC chr3 195780289 - TCTEX1D2 chr3 196033883 - Exonic hg19 LUSC TCGA-43-8115 4 1 Out-of-frame Intra-chr q29 q29 Seq+ 36526 ChimerSeq STARFusion TCGA_RNA-Seq KAT6A-CSMD1 KAT6A chr8 41905896 - CSMD1 chr8 4495080 - Exonic hg19 LUSC TCGA-43-8115 3 3 Out-of-frame Intra-chr p11.21 Oncogene p23.2 Tumor suppressor gene Seq+ 36527 ChimerSeq STARFusion TCGA_RNA-Seq NUP35-NCKAP1 NUP35 chr2 183989225 + NCKAP1 chr2 183853914 - Exonic hg19 LUSC TCGA-43-8115 2 3 In-Frame Intra-chr q32.1 q32.1 Seq+ 36528 ChimerSeq STARFusion TCGA_RNA-Seq ELMO1-IGH@ ELMO1 chr7 37025574 - IGH@ chr14 107170239 - Exonic hg19 LUSC TCGA-18-3408 5 1 Out-of-frame Inter-chr p14.1 32.33 36529 ChimerSeq STARFusion TCGA_RNA-Seq EML4-COX7A2L EML4 chr2 42531691 + COX7A2L chr2 42561009 - Exonic hg19 LUSC TCGA-77-8143 9 58 CDS-3'UTR Intra-chr p21 Oncogene p21 Seq+ 36530 ChimerSeq STARFusion TCGA_RNA-Seq PDE4D-DEPDC1B PDE4D chr5 59783769 - DEPDC1B chr5 59943360 - Exonic hg19 LUSC TCGA-77-8143 13 41 5'UTR-CDS Intra-chr q12.1 q12.1 Seq+ 36531 ChimerSeq STARFusion TCGA_RNA-Seq EML4-COX7A2L EML4 chr2 42396776 + COX7A2L chr2 42580483 - Exonic hg19 LUSC TCGA-77-8143 2 58 Out-of-frame Intra-chr p21 Oncogene p21 Seq+ 36532 ChimerSeq STARFusion TCGA_RNA-Seq PDE4D-DEPDC1B PDE4D chr5 59744464 - DEPDC1B chr5 59943360 - Exonic hg19 LUSC TCGA-77-8143 4 40 5'UTR-CDS Intra-chr q12.1 q12.1 Seq+ 36533 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-TACC1 WHSC1L1 chr8 38176413 - TACC1 chr8 38705473 + Exonic hg19 LUSC TCGA-77-8143 6 18 Out-of-frame Intra-chr p11.23 Tumor suppressor gene p11.22 Seq+ 36534 ChimerSeq STARFusion TCGA_RNA-Seq ETNK1-CMAS ETNK1 chr12 22812088 + CMAS chr12 22208083 + Exonic hg19 LUSC TCGA-77-8143 3 13 In-Frame Intra-chr p12.1 p12.1 Seq+ 36535 ChimerSeq STARFusion TCGA_RNA-Seq VRK3-PTOV1 VRK3 chr19 50501934 - PTOV1 chr19 50361000 + Exonic hg19 LUSC TCGA-77-8140 35 99 Out-of-frame Intra-chr q13.33 CK1:VRK q13.33 Seq+ 36536 ChimerSeq STARFusion TCGA_RNA-Seq MGRN1-C16orf96 MGRN1 chr16 4675049 + C16orf96 chr16 4621562 + Exonic hg19 LUSC TCGA-77-8140 4 22 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 36537 ChimerSeq STARFusion TCGA_RNA-Seq TMEM259-SBNO2 TMEM259 chr19 1020771 - SBNO2 chr19 1127764 - Exonic hg19 LUSC TCGA-77-8140 3 14 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 36538 ChimerSeq STARFusion TCGA_RNA-Seq MYT1-TCEA2 MYT1 chr20 62783263 + TCEA2 chr20 62693783 + Exonic hg19 LUSC TCGA-77-8140 2 11 5'UTR-5'UTR Intra-chr Other:WEE Transcription factor q13.33 Seq+ 36539 ChimerSeq STARFusion TCGA_RNA-Seq MYT1-TCEA2 MYT1 chr20 62783263 + TCEA2 chr20 62697829 + Exonic hg19 LUSC TCGA-77-8140 2 11 5'UTR-5'UTR Intra-chr Other:WEE Transcription factor q13.33 Seq+ 36540 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-CASC11 PVT1 chr8 128806980 + CASC11 chr8 128746205 - Exonic hg19 LUSC TCGA-63-A5MT 14 37 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 36541 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-CASC11 PVT1 chr8 128808254 + CASC11 chr8 128746205 - Exonic hg19 LUSC TCGA-63-A5MT 3 36 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 36542 ChimerSeq STARFusion TCGA_RNA-Seq CELF1-PTPMT1 CELF1 chr11 47574544 - PTPMT1 chr11 47587458 + Exonic hg19 LUSC TCGA-63-A5MT 4 29 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 36543 ChimerSeq STARFusion TCGA_RNA-Seq CELF1-NDUFS3 CELF1 chr11 47574544 - NDUFS3 chr11 47587458 + Exonic hg19 LUSC TCGA-63-A5MT 4 16 5'UTR-5'UTR Intra-chr p11.2 p11.2 36544 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106136184 - Exonic hg19 LUSC TCGA-63-A5MT 3 1 Out-of-frame Inter-chr q37.3 36545 ChimerSeq STARFusion TCGA_RNA-Seq FAM104A-CDC42EP4 FAM104A chr17 71228225 - CDC42EP4 chr17 71282751 - Exonic hg19 LUSC TCGA-77-8146 6 30 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 36546 ChimerSeq STARFusion TCGA_RNA-Seq FAM104A-CDC42EP4 FAM104A chr17 71223304 - CDC42EP4 chr17 71282751 - Exonic hg19 LUSC TCGA-77-8146 3 30 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 36547 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LUSC TCGA-77-8146 2 2 In-Frame Intra-chr p13.3 p13.3 36548 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A13-MAGI2 SLC25A13 chr7 95814239 - MAGI2 chr7 77998530 - Exonic hg19 LUSC TCGA-77-8144 7 9 In-Frame Intra-chr q21.3 q21.11 Seq+ 36549 ChimerSeq STARFusion TCGA_RNA-Seq TRRAP-SPDYE2 TRRAP chr7 98589850 + SPDYE2 chr7 102201047 + Exonic hg19 LUSC TCGA-77-8144 3 12 Out-of-frame Intra-chr q22.1 Atypical:PIKK Oncogene q22.1 36550 ChimerSeq STARFusion TCGA_RNA-Seq MAGI2-MIR1255B1 MAGI2 chr7 77973095 - MIR1255B1 chr7 81653159 + Exonic hg19 LUSC TCGA-77-8144 2 13 Out-of-frame Intra-chr q21.11 p14 36551 ChimerSeq STARFusion TCGA_RNA-Seq C9orf3-WDR53 C9orf3 chr9 97767898 + WDR53 chr3 196281678 - Exonic hg19 LUSC TCGA-77-8145 15 110 In-Frame Inter-chr q22.32 q29 Seq+ 36552 ChimerSeq STARFusion TCGA_RNA-Seq C9orf3-WDR53 C9orf3 chr9 97767898 + WDR53 chr3 196288362 - Exonic hg19 LUSC TCGA-77-8145 6 108 CDS-5'UTR Inter-chr q22.32 q29 Seq+ 36553 ChimerSeq STARFusion TCGA_RNA-Seq C9orf3-WDR53 C9orf3 chr9 97782515 + WDR53 chr3 196288362 - Exonic hg19 LUSC TCGA-77-8145 3 108 CDS-5'UTR Inter-chr q22.32 q29 Seq+ 36554 ChimerSeq STARFusion TCGA_RNA-Seq AATK-IGH@ AATK chr17 79093307 - IGH@ chr14 106330467 - Exonic hg19 LUSC TCGA-77-8148 13 1 Out-of-frame Inter-chr q25.3 32.33 36555 ChimerSeq STARFusion TCGA_RNA-Seq STIP1-PC STIP1 chr11 63967765 + PC chr11 66719939 - Exonic hg19 LUSC TCGA-77-8148 8 21 CDS-5'UTR Intra-chr q13.1 q13.2 Seq+ 36556 ChimerSeq STARFusion TCGA_RNA-Seq TRA2B-IGH@ TRA2B chr3 185642989 - IGH@ chr14 106330470 - Exonic hg19 LUSC TCGA-77-8148 8 2 Out-of-frame Inter-chr q27.2 32.33 36557 ChimerSeq STARFusion TCGA_RNA-Seq SCAF1-IGH@ SCAF1 chr19 50155990 + IGH@ chr14 106330467 - Exonic hg19 LUSC TCGA-77-8148 5 3 Out-of-frame Inter-chr q13.33 32.33 36558 ChimerSeq STARFusion TCGA_RNA-Seq CDC34-IGH@ CDC34 chr19 541659 + IGH@ chr14 106237742 - Exonic hg19 LUSC TCGA-77-8148 5 1 Out-of-frame Inter-chr p13.3 32.33 36559 ChimerSeq STARFusion TCGA_RNA-Seq RXRA-IGH@ RXRA chr9 137326057 + IGH@ chr14 106111066 - Exonic hg19 LUSC TCGA-77-8148 4 1 Out-of-frame Inter-chr q34.2 Transcription factor 32.33 36560 ChimerSeq STARFusion TCGA_RNA-Seq RXRA-IGHG2 RXRA chr9 137326057 + IGHG2 chr14 106111066 - Exonic hg19 LUSC TCGA-77-8148 4 1 Out-of-frame Inter-chr q34.2 Transcription factor 36561 ChimerSeq STARFusion TCGA_RNA-Seq TRA2B-IGH@ TRA2B chr3 185642986 - IGH@ chr14 106330066 - Exonic hg19 LUSC TCGA-77-8148 4 1 Out-of-frame Inter-chr q27.2 32.33 36562 ChimerSeq STARFusion TCGA_RNA-Seq HCFC1-EPHA5 HCFC1 chrX 153236099 - EPHA5 chr4 66189937 - Exonic hg19 LUSC TCGA-LA-A446 2 6 Out-of-frame Inter-chr q28 q13.2 Oncogene Seq+ 36563 ChimerSeq STARFusion TCGA_RNA-Seq EXOSC7-ZDHHC3 EXOSC7 chr3 45017826 + ZDHHC3 chr3 45000952 - Exonic hg19 LUSC TCGA-O2-A5IB 26 70 5'UTR-5'UTR Intra-chr p21.31 Seq+ 36564 ChimerSeq STARFusion TCGA_RNA-Seq ZNF75D-UBR2 ZNF75D chrX 134475693 - UBR2 chr6 42627394 + Exonic hg19 LUSC TCGA-O2-A5IB 7 65 5'UTR-CDS Inter-chr q26.3 Transcription factor p21.1 Seq+ 36565 ChimerSeq STARFusion TCGA_RNA-Seq ZNF75D-UBR2 ZNF75D chrX 134477186 - UBR2 chr6 42627394 + Exonic hg19 LUSC TCGA-O2-A5IB 4 65 5'UTR-CDS Inter-chr q26.3 Transcription factor p21.1 Seq+ 36566 ChimerSeq STARFusion TCGA_RNA-Seq BUB1B-PCM1 BUB1B chr15 40468874 + PCM1 chr8 17842956 + Exonic hg19 LUSC TCGA-O2-A5IB 2 22 Out-of-frame Inter-chr q15.1 Oncogene p22 Seq+ 36567 ChimerSeq STARFusion TCGA_RNA-Seq BUB1B-PCM1 BUB1B chr15 40468874 + PCM1 chr8 17840742 + Exonic hg19 LUSC TCGA-O2-A5IB 2 22 Out-of-frame Inter-chr q15.1 Oncogene p22 Seq+ 36568 ChimerSeq STARFusion TCGA_RNA-Seq UBAP1-UNC13B UBAP1 chr9 34220946 + UNC13B chr9 35258990 + Exonic hg19 LUSC TCGA-O2-A5IB 2 16 In-Frame Intra-chr p13.3 p13.3 Seq+ 36569 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-FGF10 NIPBL chr5 36962376 + FGF10 chr5 44310632 - Exonic hg19 LUSC TCGA-22-4595 16 86 In-Frame Intra-chr p13.2 p12 Seq+ 36570 ChimerSeq STARFusion TCGA_RNA-Seq CCDC91-PDZRN4 CCDC91 chr12 28637098 + PDZRN4 chr12 41900258 + Exonic hg19 LUSC TCGA-22-4595 2 11 In-Frame Intra-chr p11.22 q12 Seq+ 36571 ChimerSeq STARFusion TCGA_RNA-Seq SAMD12-RTN1 SAMD12 chr8 119634043 - RTN1 chr14 60074210 - Exonic hg19 LUSC TCGA-22-4594 23 175 In-Frame Inter-chr q24.12 q23.1 Seq+ 36572 ChimerSeq STARFusion TCGA_RNA-Seq SAMD12-RTN1 SAMD12 chr8 119634043 - RTN1 chr14 60076950 - Exonic hg19 LUSC TCGA-22-4594 3 173 Out-of-frame Inter-chr q24.12 q23.1 Seq+ 36573 ChimerSeq STARFusion TCGA_RNA-Seq RNPS1-IGL@ RNPS1 chr16 2307630 - IGL@ chr22 23247171 + Exonic hg19 LUSC TCGA-22-4594 24 1 Out-of-frame Inter-chr p13.3 q11.22 36574 ChimerSeq STARFusion TCGA_RNA-Seq BRI3-IGL@ BRI3 chr7 97935807 + IGL@ chr22 23247172 + Exonic hg19 LUSC TCGA-22-4594 22 1 Out-of-frame Inter-chr q21.3 q11.22 36575 ChimerSeq STARFusion TCGA_RNA-Seq EPG5-ST8SIA5 EPG5 chr18 43547143 - ST8SIA5 chr18 44284627 - Exonic hg19 LUSC TCGA-22-4594 2 15 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 36576 ChimerSeq STARFusion TCGA_RNA-Seq HCG4P5-SFTPA2 HCG4P5 chr6 29910764 - SFTPA2 chr10 81316905 - Exonic hg19 LUSC TCGA-22-4593 3 16 Out-of-frame Inter-chr q22.3 36577 ChimerSeq STARFusion TCGA_RNA-Seq TM7SF3-ASUN TM7SF3 chr12 27167011 - ASUN chr12 27066934 - Exonic hg19 LUSC TCGA-22-4591 9 66 Out-of-frame Intra-chr p11.23 36578 ChimerSeq STARFusion TCGA_RNA-Seq MDH2-STYXL1 MDH2 chr7 75677544 + STYXL1 chr7 75659842 - Exonic hg19 LUSC TCGA-22-4591 7 63 CDS-5'UTR Intra-chr q11.23 q11.23 Seq+ 36579 ChimerSeq STARFusion TCGA_RNA-Seq MDH2-STYXL1 MDH2 chr7 75677544 + STYXL1 chr7 75659845 - Exonic hg19 LUSC TCGA-22-4591 7 63 CDS-5'UTR Intra-chr q11.23 q11.23 Seq+ 36580 ChimerSeq STARFusion TCGA_RNA-Seq STIM1-RRM1 STIM1 chr11 3877639 + RRM1 chr11 4159425 + Exonic hg19 LUSC TCGA-22-4591 16 22 CDS-3'UTR Intra-chr p15.4 p15.4 Oncogene 36581 ChimerSeq STARFusion TCGA_RNA-Seq TM7SF3-ASUN TM7SF3 chr12 27167011 - ASUN chr12 27066620 - Exonic hg19 LUSC TCGA-22-4591 3 66 Out-of-frame Intra-chr p11.23 36582 ChimerSeq STARFusion TCGA_RNA-Seq ALOX15-RN7SL2 ALOX15 chr17 4534446 - RN7SL2 chr14 50329512 - Exonic hg19 LUSC TCGA-22-4591 4 61 Out-of-frame Inter-chr p13.2 Tumor suppressor gene q21.3 36583 ChimerSeq STARFusion TCGA_RNA-Seq METTL22-PMM2 METTL22 chr16 8729169 + PMM2 chr16 8941581 + Exonic hg19 LUSC TCGA-22-4591 3 20 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 36584 ChimerSeq STARFusion TCGA_RNA-Seq SPATA18-EXOC1 SPATA18 chr4 52917957 + EXOC1 chr4 56768510 + Exonic hg19 LUSC TCGA-22-4591 4 5 In-Frame Intra-chr q12 q12 Seq+ 36585 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119683178 - TBX15 chr1 119474455 - Exonic hg19 LUSC TCGA-22-4591 2 9 CDS-5'UTR Intra-chr p12 p12 Transcription factor 36586 ChimerSeq STARFusion TCGA_RNA-Seq KDM4A-PTCH2 KDM4A chr1 44137546 + PTCH2 chr1 45286376 - Exonic hg19 LUSC TCGA-98-8022 6 21 Out-of-frame Intra-chr p34.2 p34.1 Tumor suppressor gene Seq+ 36587 ChimerSeq STARFusion TCGA_RNA-Seq TNFAIP2-IGH@ TNFAIP2 chr14 103600136 + IGH@ chr14 106330059 - Exonic hg19 LUSC TCGA-98-8022 7 1 Out-of-frame Intra-chr q32.32 32.33 36588 ChimerSeq STARFusion TCGA_RNA-Seq TNFAIP2-IGHG3 TNFAIP2 chr14 103600136 + IGHG3 chr14 106330059 - Exonic hg19 LUSC TCGA-98-8022 7 0 Out-of-frame Intra-chr q32.32 36589 ChimerSeq STARFusion TCGA_RNA-Seq TNFAIP2-IGHJ5 TNFAIP2 chr14 103600136 + IGHJ5 chr14 106330059 - Exonic hg19 LUSC TCGA-98-8022 7 0 Out-of-frame Intra-chr q32.32 36590 ChimerSeq STARFusion TCGA_RNA-Seq ZYG11B-FGGY ZYG11B chr1 53282301 + FGGY chr1 60232862 + Exonic hg19 LUSC TCGA-98-8022 2 10 CDS-3'UTR Intra-chr p32.3 p32.1 Seq+ 36591 ChimerSeq STARFusion TCGA_RNA-Seq ZHX2-LELP1 ZHX2 chr8 123794185 + LELP1 chr1 153173575 + Exonic hg19 LUSC TCGA-98-8023 11 82 5'UTR-5'UTR Inter-chr q24.13 Tumor suppressor gene Transcription factor q21.3 Seq+ 36592 ChimerSeq STARFusion TCGA_RNA-Seq ZHX2-LELP1 ZHX2 chr8 123794185 + LELP1 chr1 153177163 + Exonic hg19 LUSC TCGA-98-8023 4 82 5'UTR-5'UTR Inter-chr q24.13 Tumor suppressor gene Transcription factor q21.3 Seq+ 36593 ChimerSeq STARFusion TCGA_RNA-Seq AFTPH-GLYATL3 AFTPH chr2 64796813 + GLYATL3 chr6 49479665 + Exonic hg19 LUSC TCGA-98-8023 10 43 CDS-5'UTR Inter-chr p14 p12.3 Seq+ 36594 ChimerSeq STARFusion TCGA_RNA-Seq BCL9-IGH@ BCL9 chr1 147091871 + IGH@ chr14 106330466 - Exonic hg19 LUSC TCGA-98-8023 5 1 Out-of-frame Inter-chr q21.2 Oncogene 32.33 36595 ChimerSeq STARFusion TCGA_RNA-Seq ELMO1-IGH@ ELMO1 chr7 37025574 - IGH@ chr14 107170239 - Exonic hg19 LUSC TCGA-22-4599 13 2 Out-of-frame Inter-chr p14.1 32.33 36596 ChimerSeq STARFusion TCGA_RNA-Seq AARS-IGH@ AARS chr16 70301604 - IGH@ chr14 106209408 - Exonic hg19 LUSC TCGA-22-4599 5 2 Out-of-frame Inter-chr q22.1 32.33 36597 ChimerSeq STARFusion TCGA_RNA-Seq AARS-IGHG1 AARS chr16 70301604 - IGHG1 chr14 106237743 - Exonic hg19 LUSC TCGA-22-4599 5 2 Out-of-frame Inter-chr q22.1 q32.33 36598 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-HNRNPH1 IGH@ chr14 107034729 - HNRNPH1 chr5 179043657 - Exonic hg19 LUSC TCGA-22-4599 5 2 Out-of-frame Inter-chr 32.33 q35.3 36599 ChimerSeq STARFusion TCGA_RNA-Seq KCTD11-IGL@ KCTD11 chr17 7257019 + IGL@ chr22 23241798 + Exonic hg19 LUSC TCGA-22-4599 4 1 Out-of-frame Inter-chr p13.1 q11.22 36600 ChimerSeq STARFusion TCGA_RNA-Seq KCTD11-IGLC2 KCTD11 chr17 7257019 + IGLC2 chr22 23241798 + Exonic hg19 LUSC TCGA-22-4599 4 1 Out-of-frame Inter-chr p13.1 q11.22 36601 ChimerSeq STARFusion TCGA_RNA-Seq BTBD3-MACF1 BTBD3 chr20 11871602 + MACF1 chr1 39715686 + Exonic hg19 LUSC TCGA-98-8021 4 21 5'UTR-CDS Inter-chr p12.2 p34.3 Seq+ 36602 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGH@ HOMER2 chr15 83561493 - IGH@ chr14 106209410 - Exonic hg19 LUSC TCGA-98-8021 9 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene 32.33 36603 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGHG1 HOMER2 chr15 83561493 - IGHG1 chr14 106209410 - Exonic hg19 LUSC TCGA-98-8021 9 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene q32.33 36604 ChimerSeq STARFusion TCGA_RNA-Seq COPZ1-IGH@ COPZ1 chr12 54695099 + IGH@ chr14 106175004 - Exonic hg19 LUSC TCGA-98-8021 7 5 Out-of-frame Inter-chr q13.13 32.33 36605 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGH@ HOMER2 chr15 83561493 - IGH@ chr14 106237745 - Exonic hg19 LUSC TCGA-98-8021 7 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene 32.33 36606 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGHG1 HOMER2 chr15 83561493 - IGHG1 chr14 106237745 - Exonic hg19 LUSC TCGA-98-8021 6 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene q32.33 36607 ChimerSeq STARFusion TCGA_RNA-Seq IGF2BP2-ST6GAL1 IGF2BP2 chr3 185540941 - ST6GAL1 chr3 186790637 + Exonic hg19 LUSC TCGA-98-8021 2 9 Out-of-frame Intra-chr q27.2 q27.3 Seq+ 36608 ChimerSeq STARFusion TCGA_RNA-Seq SLC24A3-MACROD2 SLC24A3 chr20 19566188 + MACROD2 chr20 15843390 + Exonic hg19 LUSC TCGA-98-8021 2 6 In-Frame Intra-chr p11.23 p12.1 Seq+ 36609 ChimerSeq STARFusion TCGA_RNA-Seq PHC3-FNDC3B PHC3 chr3 169863211 - FNDC3B chr3 172114954 + Exonic hg19 LUSC TCGA-56-1622 27 112 In-Frame Intra-chr q26.2 Tumor suppressor gene q26.31 Seq+ 36610 ChimerSeq STARFusion TCGA_RNA-Seq SEC61A2-CAMK1D SEC61A2 chr10 12178169 + CAMK1D chr10 12802947 + Exonic hg19 LUSC TCGA-58-8388 3 12 Out-of-frame Intra-chr p14 p13 Seq+ 36611 ChimerSeq STARFusion TCGA_RNA-Seq RPS19-CEACAM5 RPS19 chr19 42365281 + CEACAM5 chr19 42231154 + Exonic hg19 LUSC TCGA-58-8387 170 1557 In-Frame Intra-chr q13.2 q13.2 Seq+ 36612 ChimerSeq STARFusion TCGA_RNA-Seq RPS19-CEACAM5 RPS19 chr19 42365281 + CEACAM5 chr19 42224842 + Exonic hg19 LUSC TCGA-58-8387 150 1495 In-Frame Intra-chr q13.2 q13.2 Seq+ 36613 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CKAP4 IGH@ chr14 106471247 - CKAP4 chr12 106633171 - Exonic hg19 LUSC TCGA-58-8387 45 3 Out-of-frame Inter-chr 32.33 q23.3 36614 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CKAP4 IGH@ chr14 106452672 - CKAP4 chr12 106633171 - Exonic hg19 LUSC TCGA-58-8387 31 3 Out-of-frame Inter-chr 32.33 q23.3 36615 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CKAP4 IGH@ chr14 106405612 - CKAP4 chr12 106633171 - Exonic hg19 LUSC TCGA-58-8387 28 3 Out-of-frame Inter-chr 32.33 q23.3 36616 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CKAP4 IGH@ chr14 107131034 - CKAP4 chr12 106633171 - Exonic hg19 LUSC TCGA-58-8387 17 3 Out-of-frame Inter-chr 32.33 q23.3 36617 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CKAP4 IGH@ chr14 106691674 - CKAP4 chr12 106633171 - Exonic hg19 LUSC TCGA-58-8387 13 3 Out-of-frame Inter-chr 32.33 q23.3 36618 ChimerSeq STARFusion TCGA_RNA-Seq P4HTM-IGH@ P4HTM chr3 49040772 + IGH@ chr14 106330464 - Exonic hg19 LUSC TCGA-58-8387 12 2 Out-of-frame Inter-chr p21.31 32.33 36619 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CKAP4 IGH@ chr14 106877620 - CKAP4 chr12 106633171 - Exonic hg19 LUSC TCGA-58-8387 11 3 Out-of-frame Inter-chr 32.33 q23.3 36620 ChimerSeq STARFusion TCGA_RNA-Seq P4HTM-IGH@ P4HTM chr3 49040772 + IGH@ chr14 106330063 - Exonic hg19 LUSC TCGA-58-8387 11 2 Out-of-frame Inter-chr p21.31 32.33 36621 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CKAP4 IGH@ chr14 106539080 - CKAP4 chr12 106633171 - Exonic hg19 LUSC TCGA-58-8387 9 3 Out-of-frame Inter-chr 32.33 q23.3 36622 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CKAP4 IGH@ chr14 107113742 - CKAP4 chr12 106633171 - Exonic hg19 LUSC TCGA-58-8387 8 3 Out-of-frame Inter-chr 32.33 q23.3 36623 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CKAP4 IGH@ chr14 106518401 - CKAP4 chr12 106633171 - Exonic hg19 LUSC TCGA-58-8387 6 3 Out-of-frame Inter-chr 32.33 q23.3 36624 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CKAP4 IGH@ chr14 106586138 - CKAP4 chr12 106633171 - Exonic hg19 LUSC TCGA-58-8387 5 3 Out-of-frame Inter-chr 32.33 q23.3 36625 ChimerSeq STARFusion TCGA_RNA-Seq LMNB2-IGH@ LMNB2 chr19 2432412 - IGH@ chr14 106329450 - Exonic hg19 LUSC TCGA-58-8387 4 2 Out-of-frame Inter-chr p13.3 32.33 36626 ChimerSeq STARFusion TCGA_RNA-Seq NRBF2-REEP3 NRBF2 chr10 64893260 + REEP3 chr10 65369947 + Exonic hg19 LUSC TCGA-58-8387 2 8 In-Frame Intra-chr q21.3 q21.3 Seq+ 36627 ChimerSeq STARFusion TCGA_RNA-Seq ELMO1-IGH@ ELMO1 chr7 37025574 - IGH@ chr14 107170239 - Exonic hg19 LUSC TCGA-58-8386 5 1 Out-of-frame Inter-chr p14.1 32.33 36628 ChimerSeq STARFusion TCGA_RNA-Seq PJA2-GPR98 PJA2 chr5 108745543 - GPR98 chr5 90445847 + Exonic hg19 LUSC TCGA-56-6545 300 765 5'UTR-5'UTR Intra-chr q21.3 Seq+ 36629 ChimerSeq STARFusion TCGA_RNA-Seq TANK-MNAT1 TANK chr2 162036272 + MNAT1 chr14 61434947 + Exonic hg19 LUSC TCGA-56-6545 45 257 Out-of-frame Inter-chr q24.2 Tumor suppressor gene q23.1 Seq+ 36630 ChimerSeq STARFusion TCGA_RNA-Seq TANK-MNAT1 TANK chr2 162036272 + MNAT1 chr14 61435277 + Exonic hg19 LUSC TCGA-56-6545 8 257 CDS-3'UTR Inter-chr q24.2 Tumor suppressor gene q23.1 Seq+ 36631 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-KRT15 IGL@ chr22 22677319 + KRT15 chr17 39674861 - Exonic hg19 LUSC TCGA-56-6545 46 1 Out-of-frame Inter-chr q11.22 q21.2 36632 ChimerSeq STARFusion TCGA_RNA-Seq PKD1P5-IGL@ PKD1P5 chr16 18479158 - IGL@ chr22 23243156 + Exonic hg19 LUSC TCGA-56-6545 29 0 Out-of-frame Inter-chr p12.3 q11.22 36633 ChimerSeq STARFusion TCGA_RNA-Seq PKD1P5-IGLC2 PKD1P5 chr16 18479158 - IGLC2 chr22 23243156 + Exonic hg19 LUSC TCGA-56-6545 29 0 Out-of-frame Inter-chr p12.3 q11.22 36634 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSD1 PRSS27 chr16 2763530 - TPSD1 chr16 1308333 + Exonic hg19 LUSC TCGA-56-6545 16 11 In-Frame Intra-chr p13.3 p13.3 36635 ChimerSeq STARFusion TCGA_RNA-Seq TANK-SLC38A6 TANK chr2 162036272 + SLC38A6 chr14 61449226 + Exonic hg19 LUSC TCGA-56-6545 8 14 In-Frame Inter-chr q24.2 Tumor suppressor gene q23.1 Seq+ 36636 ChimerSeq STARFusion TCGA_RNA-Seq FOXP4-IGHG1 FOXP4 chr6 41557753 + IGHG1 chr14 106209406 - Exonic hg19 LUSC TCGA-56-6545 10 2 Out-of-frame Inter-chr p21.1 Oncogene Transcription factor q32.33 36637 ChimerSeq STARFusion TCGA_RNA-Seq SLC35F2-IGKC SLC35F2 chr11 107661832 - IGKC chr2 89161437 - Exonic hg19 LUSC TCGA-39-5039 9 2 Out-of-frame Inter-chr q22.3 p11.2 36638 ChimerSeq STARFusion TCGA_RNA-Seq SLC35F2-IGKJ1 SLC35F2 chr11 107661832 - IGKJ1 chr2 89161437 - Exonic hg19 LUSC TCGA-39-5039 9 0 Out-of-frame Inter-chr q22.3 p11.2 36639 ChimerSeq STARFusion TCGA_RNA-Seq CCNL2-MRPL20 CCNL2 chr1 1333613 - MRPL20 chr1 1337636 - Exonic hg19 LUSC TCGA-39-5039 3 14 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 36640 ChimerSeq STARFusion TCGA_RNA-Seq RNF216-IGH@ RNF216 chr7 5781250 - IGH@ chr14 106330067 - Exonic hg19 LUSC TCGA-39-5039 4 3 Out-of-frame Inter-chr p22.1 32.33 36641 ChimerSeq STARFusion TCGA_RNA-Seq RNF216-IGHG3 RNF216 chr7 5781250 - IGHG3 chr14 106330067 - Exonic hg19 LUSC TCGA-39-5039 4 1 Out-of-frame Inter-chr p22.1 36642 ChimerSeq STARFusion TCGA_RNA-Seq ROBO2-ERLIN2 ROBO2 chr3 77147491 + ERLIN2 chr8 37602089 + Exonic hg19 LUSC TCGA-56-6546 8 32 In-Frame Inter-chr p12.3 p11.23 Seq+ 36643 ChimerSeq STARFusion TCGA_RNA-Seq OR2T27-IGKC OR2T27 chr1 248813561 - IGKC chr2 89161432 - Exonic hg19 LUSC TCGA-56-6546 12 0 Out-of-frame Inter-chr q44 p11.2 36644 ChimerSeq STARFusion TCGA_RNA-Seq OR2T27-IGKJ1 OR2T27 chr1 248813561 - IGKJ1 chr2 89161432 - Exonic hg19 LUSC TCGA-56-6546 12 0 Out-of-frame Inter-chr q44 p11.2 36645 ChimerSeq STARFusion TCGA_RNA-Seq ROBO2-ERLIN2 ROBO2 chr3 77147491 + ERLIN2 chr8 37607077 + Exonic hg19 LUSC TCGA-56-6546 4 32 In-Frame Inter-chr p12.3 p11.23 Seq+ 36646 ChimerSeq STARFusion TCGA_RNA-Seq NEDD4L-RPL17 NEDD4L chr18 55711940 + RPL17 chr18 47017954 - Exonic hg19 LUSC TCGA-56-6546 4 7 CDS-5'UTR Intra-chr q21.31 Tumor suppressor gene q21.1 36647 ChimerSeq STARFusion TCGA_RNA-Seq CTIF-PSTPIP2 CTIF chr18 46065683 + PSTPIP2 chr18 43620013 - Exonic hg19 LUSC TCGA-56-6546 3 9 5'UTR-CDS Intra-chr q21.1 Seq+ 36648 ChimerSeq STARFusion TCGA_RNA-Seq RAB25-PMF1 RAB25 chr1 156031234 + PMF1 chr1 156202111 + Exonic hg19 LUSC TCGA-39-5037 63 465 Out-of-frame Intra-chr q22 Tumor suppressor gene q22 Seq+ 36649 ChimerSeq STARFusion TCGA_RNA-Seq HECTD4-FMNL2 HECTD4 chr12 112664273 - FMNL2 chr2 153506193 + Exonic hg19 LUSC TCGA-39-5037 5 3 Out-of-frame Inter-chr q24.13 q23.3 Seq+ 36650 ChimerSeq STARFusion TCGA_RNA-Seq APTX-ARL5B APTX chr9 32987758 - ARL5B chr10 18961551 + Exonic hg19 LUSC TCGA-39-5037 2 6 In-Frame Inter-chr p21.1 p12.31 Seq+ 36651 ChimerSeq STARFusion TCGA_RNA-Seq PHLDB1-ARCN1 PHLDB1 chr11 118495775 + ARCN1 chr11 118471340 + Exonic hg19 LUSC TCGA-77-7138 29 127 Out-of-frame Intra-chr q23.3 q23.3 36652 ChimerSeq STARFusion TCGA_RNA-Seq ARID1A-RPL4 ARID1A chr1 27059283 + RPL4 chr15 66792685 - Exonic hg19 LUSC TCGA-77-7139 162 454 Out-of-frame Inter-chr p36.11 Oncogene Tumor suppressor gene q22.31 Seq+ 36653 ChimerSeq STARFusion TCGA_RNA-Seq MARK3-TDRD9 MARK3 chr14 103958371 + TDRD9 chr14 104506533 + Exonic hg19 LUSC TCGA-77-7139 31 59 In-Frame Intra-chr q32.32 CAMK:CAMKL q32.33 Seq+ 36654 ChimerSeq STARFusion TCGA_RNA-Seq ADAM9-HTRA4 ADAM9 chr8 38884329 + HTRA4 chr8 38839172 + Exonic hg19 LUSC TCGA-77-7139 10 25 Out-of-frame Intra-chr p11.22 Seq+ 36655 ChimerSeq STARFusion TCGA_RNA-Seq ADAM9-HTRA4 ADAM9 chr8 38884329 + HTRA4 chr8 38845455 + Exonic hg19 LUSC TCGA-77-7139 3 25 In-Frame Intra-chr p11.22 Seq+ 36656 ChimerSeq STARFusion TCGA_RNA-Seq XPO6-GSG1L XPO6 chr16 28157415 - GSG1L chr16 27856382 - Exonic hg19 LUSC TCGA-77-7139 2 15 Out-of-frame Intra-chr p12.1 p12.1 36657 ChimerSeq STARFusion TCGA_RNA-Seq FRMPD3-IGKC FRMPD3 chrX 106847204 + IGKC chr2 89161068 - Exonic hg19 LUSC TCGA-39-5031 48 0 Out-of-frame Inter-chr q22.3 p11.2 36658 ChimerSeq STARFusion TCGA_RNA-Seq FRMPD3-IGKJ2 FRMPD3 chrX 106847204 + IGKJ2 chr2 89161068 - Exonic hg19 LUSC TCGA-39-5031 48 0 Out-of-frame Inter-chr q22.3 p11.2 36659 ChimerSeq STARFusion TCGA_RNA-Seq CTSB-IGH@ CTSB chr8 11726686 - IGH@ chr14 106237740 - Exonic hg19 LUSC TCGA-39-5031 12 8 Out-of-frame Inter-chr p23.1 32.33 36660 ChimerSeq STARFusion TCGA_RNA-Seq CTSB-IGHG1 CTSB chr8 11726686 - IGHG1 chr14 106237740 - Exonic hg19 LUSC TCGA-39-5031 12 3 Out-of-frame Inter-chr p23.1 q32.33 36661 ChimerSeq STARFusion TCGA_RNA-Seq CTSB-IGH@ CTSB chr8 11726686 - IGH@ chr14 106092400 - Exonic hg19 LUSC TCGA-39-5031 9 8 Out-of-frame Inter-chr p23.1 32.33 36662 ChimerSeq STARFusion TCGA_RNA-Seq CTSB-IGHG1 CTSB chr8 11726689 - IGHG1 chr14 106209408 - Exonic hg19 LUSC TCGA-39-5031 8 3 Out-of-frame Inter-chr p23.1 q32.33 36663 ChimerSeq STARFusion TCGA_RNA-Seq ELMO1-IGH@ ELMO1 chr7 37025574 - IGH@ chr14 107170239 - Exonic hg19 LUSC TCGA-39-5031 8 1 Out-of-frame Inter-chr p14.1 32.33 36664 ChimerSeq STARFusion TCGA_RNA-Seq CTSB-IGH@ CTSB chr8 11726689 - IGH@ chr14 106111127 - Exonic hg19 LUSC TCGA-39-5031 6 7 Out-of-frame Inter-chr p23.1 32.33 36665 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGH@ HOMER2 chr15 83561493 - IGH@ chr14 106209410 - Exonic hg19 LUSC TCGA-39-5031 7 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene 32.33 36666 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGHG1 HOMER2 chr15 83561493 - IGHG1 chr14 106209410 - Exonic hg19 LUSC TCGA-39-5031 7 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene q32.33 36667 ChimerSeq STARFusion TCGA_RNA-Seq CTSB-IGH@ CTSB chr8 11726683 - IGH@ chr14 106136176 - Exonic hg19 LUSC TCGA-39-5031 4 7 Out-of-frame Inter-chr p23.1 32.33 36668 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-COL6A3 IGH@ chr14 106714368 - COL6A3 chr2 238287802 - Exonic hg19 LUSC TCGA-39-5031 4 7 Out-of-frame Inter-chr 32.33 q37.3 36669 ChimerSeq STARFusion TCGA_RNA-Seq CTSB-IGH@ CTSB chr8 11726689 - IGH@ chr14 106209408 - Exonic hg19 LUSC TCGA-39-5031 3 6 Out-of-frame Inter-chr p23.1 32.33 36670 ChimerSeq STARFusion TCGA_RNA-Seq FNTB-MNAT1 FNTB chr14 65494499 + MNAT1 chr14 61434947 + Exonic hg19 LUSC TCGA-39-5031 3 6 In-Frame Intra-chr q23.3 q23.1 Seq+ 36671 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG3 STK25 chr2 242434915 - IGHG3 chr14 106237745 - Exonic hg19 LUSC TCGA-39-5030 97 1 Out-of-frame Inter-chr q37.3 36672 ChimerSeq STARFusion TCGA_RNA-Seq FOXP4-IGHG3 FOXP4 chr6 41555157 + IGHG3 chr14 106330464 - Exonic hg19 LUSC TCGA-39-5030 87 1 Out-of-frame Inter-chr p21.1 Oncogene Transcription factor 36673 ChimerSeq STARFusion TCGA_RNA-Seq IGHGP-TINAGL1 IGHGP chr14 106134591 - TINAGL1 chr1 32052503 + Exonic hg19 LUSC TCGA-39-5030 71 1 Out-of-frame Inter-chr p35.2 36674 ChimerSeq STARFusion TCGA_RNA-Seq C22orf39-IGHGP C22orf39 chr22 19344505 - IGHGP chr14 106136183 - Exonic hg19 LUSC TCGA-39-5030 52 1 Out-of-frame Inter-chr q11.21 36675 ChimerSeq STARFusion TCGA_RNA-Seq HIRA-IGHGP HIRA chr22 19344505 - IGHGP chr14 106136183 - Exonic hg19 LUSC TCGA-39-5030 52 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 36676 ChimerSeq STARFusion TCGA_RNA-Seq C22orf39-IGHGP C22orf39 chr22 19344505 - IGHGP chr14 106209409 - Exonic hg19 LUSC TCGA-39-5030 30 1 Out-of-frame Inter-chr q11.21 36677 ChimerSeq STARFusion TCGA_RNA-Seq HIRA-IGHGP HIRA chr22 19344505 - IGHGP chr14 106209409 - Exonic hg19 LUSC TCGA-39-5030 30 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 36678 ChimerSeq STARFusion TCGA_RNA-Seq TRAF3-BMP3 TRAF3 chr14 103296809 + BMP3 chr4 81966892 + Exonic hg19 LUSC TCGA-39-5030 4 51 5'UTR-5'UTR Inter-chr q32.32 q21.21 Seq+ 36679 ChimerSeq STARFusion TCGA_RNA-Seq TRAF3-BMP3 TRAF3 chr14 103244012 + BMP3 chr4 81966892 + Exonic hg19 LUSC TCGA-39-5030 3 51 5'UTR-5'UTR Inter-chr q32.32 q21.21 Seq+ 36680 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-NOTCH1 IGHG1 chr14 106134590 - NOTCH1 chr9 139403428 - Exonic hg19 LUSC TCGA-39-5030 14 3 Out-of-frame Inter-chr q32.33 q34.3 Oncogene Tumor suppressor gene 36681 ChimerSeq STARFusion TCGA_RNA-Seq MAP1LC3B-IGHA1 MAP1LC3B chr16 87436602 + IGHA1 chr14 106175004 - Exonic hg19 LUSC TCGA-39-5030 10 1 Out-of-frame Inter-chr q24.2 36682 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-DNAJC5 IGHG1 chr14 106134587 - DNAJC5 chr20 62526585 + Exonic hg19 LUSC TCGA-39-5030 9 1 Out-of-frame Inter-chr q32.33 q13.33 36683 ChimerSeq STARFusion TCGA_RNA-Seq ATP5SL-IGKJ1 ATP5SL chr19 41938071 - IGKJ1 chr2 89161432 - Exonic hg19 LUSC TCGA-39-5030 7 0 Out-of-frame Inter-chr q13.2 p11.2 36684 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-HIVEP3 IGHG1 chr14 106207995 - HIVEP3 chr1 41978893 - Exonic hg19 LUSC TCGA-39-5030 5 1 Out-of-frame Inter-chr q32.33 p34.2 Tumor suppressor gene Transcription factor 36685 ChimerSeq STARFusion TCGA_RNA-Seq ABCA5-C17orf67 ABCA5 chr17 67280094 - C17orf67 chr17 54872541 - Exonic hg19 LUSC TCGA-6A-AB49 8 60 Out-of-frame Intra-chr q24.3 q22 Seq+ 36686 ChimerSeq STARFusion TCGA_RNA-Seq BAGE2-CTBP2P1 BAGE2 chr21 11058161 - CTBP2P1 chrY 59001440 + Exonic hg19 LUSC TCGA-56-A62T 4 12 Out-of-frame Inter-chr p11.2 36687 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-AKR1C1 IGH@ chr14 107136769 - AKR1C1 chr10 5020472 + Exonic hg19 LUSC TCGA-66-2737 5 25 Out-of-frame Inter-chr 32.33 p15.1 36688 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1456-GATA4 KIAA1456 chr8 12848540 + GATA4 chr8 11606428 + Exonic hg19 LUSC TCGA-43-6143 9 39 5'UTR-CDS Intra-chr p22 p23.1 Tumor suppressor gene Transcription factor Seq+ 36689 ChimerSeq STARFusion TCGA_RNA-Seq DLEU1-RNASEH2B DLEU1 chr13 50760206 + RNASEH2B chr13 51544068 + Exonic hg19 LUSC TCGA-43-6143 7 38 3'UTR-CDS Intra-chr q14.2 Tumor suppressor gene q14.3 36690 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1456-GATA4 KIAA1456 chr8 12848540 + GATA4 chr8 11606425 + Exonic hg19 LUSC TCGA-43-6143 4 39 5'UTR-CDS Intra-chr p22 p23.1 Tumor suppressor gene Transcription factor Seq+ 36691 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1456-GATA4 KIAA1456 chr8 12848509 + GATA4 chr8 11606425 + Exonic hg19 LUSC TCGA-43-6143 2 39 Out-of-frame Intra-chr p22 p23.1 Tumor suppressor gene Transcription factor Seq+ 36692 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF3-MED15 ZNRF3 chr22 29280054 + MED15 chr22 20891404 + Exonic hg19 LUSC TCGA-43-6143 5 25 Out-of-frame Intra-chr q12.1 q11.21 Seq+ 36693 ChimerSeq STARFusion TCGA_RNA-Seq SRPK2-LINC01004 SRPK2 chr7 104800954 - LINC01004 chr7 104623138 - Exonic hg19 LUSC TCGA-22-0940 9 38 Out-of-frame Intra-chr q22.3 CMGC:SRPK q22.3 36694 ChimerSeq STARFusion TCGA_RNA-Seq CERS6-G6PC2 CERS6 chr2 169574488 + G6PC2 chr2 169764078 + Exonic hg19 LUSC TCGA-22-0940 2 7 In-Frame Intra-chr q24.3 Seq+ 36695 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-ORMDL3 FBXL20 chr17 37557614 - ORMDL3 chr17 38080478 - Exonic hg19 LUSC TCGA-22-0944 57 288 CDS-5'UTR Intra-chr q12 q21.1 Seq+ 36696 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-ORMDL3 FBXL20 chr17 37558426 - ORMDL3 chr17 38080478 - Exonic hg19 LUSC TCGA-22-0944 38 287 5'UTR-5'UTR Intra-chr q12 q21.1 Seq+ 36697 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-ORMDL3 FBXL20 chr17 37558426 - ORMDL3 chr17 38080473 - Exonic hg19 LUSC TCGA-22-0944 18 287 Out-of-frame Intra-chr q12 q21.1 Seq+ 36698 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-ORMDL3 FBXL20 chr17 37557614 - ORMDL3 chr17 38080473 - Exonic hg19 LUSC TCGA-22-0944 11 287 CDS-5'UTR Intra-chr q12 q21.1 Seq+ 36699 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-PPP1R1B ERBB2 chr17 37876087 + PPP1R1B chr17 37792069 + Exonic hg19 LUSC TCGA-22-0944 6 10 Out-of-frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 36700 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-GSDMB FBXL20 chr17 37557614 - GSDMB chr17 38068750 - Exonic hg19 LUSC TCGA-22-0944 3 18 Out-of-frame Intra-chr q12 q21.1 Seq+ 36701 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-GSDMB FBXL20 chr17 37558426 - GSDMB chr17 38073583 - Exonic hg19 LUSC TCGA-22-0944 2 18 5'UTR-5'UTR Intra-chr q12 q21.1 Seq+ 36702 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-GSDMB FBXL20 chr17 37558426 - GSDMB chr17 38073574 - Exonic hg19 LUSC TCGA-22-0944 2 18 5'UTR-5'UTR Intra-chr q12 q21.1 Seq+ 36703 ChimerSeq STARFusion TCGA_RNA-Seq CRCP-IGL@ CRCP chr7 65618760 + IGL@ chr22 23047112 + Exonic hg19 LUSC TCGA-90-A59Q 14 1 Out-of-frame Inter-chr q11.21 q11.22 36704 ChimerSeq STARFusion TCGA_RNA-Seq CRCP-IGL@ CRCP chr7 65618760 + IGL@ chr22 23011087 + Exonic hg19 LUSC TCGA-90-A59Q 13 1 Out-of-frame Inter-chr q11.21 q11.22 36705 ChimerSeq STARFusion TCGA_RNA-Seq RABGAP1-TTLL11 RABGAP1 chr9 125782738 + TTLL11 chr9 124801647 - Exonic hg19 LUSC TCGA-90-A59Q 6 27 In-Frame Intra-chr q33.2 q33.2 Seq+ 36706 ChimerSeq STARFusion TCGA_RNA-Seq HTRA2-IGH@ HTRA2 chr2 74758922 + IGH@ chr14 106330053 - Exonic hg19 LUSC TCGA-90-A59Q 5 1 Out-of-frame Inter-chr p13.1 Tumor suppressor gene 32.33 36707 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-RPS27A IGH@ chr14 106785894 - RPS27A chr2 55459768 + Exonic hg19 LUSC TCGA-90-A59Q 4 3 Out-of-frame Inter-chr 32.33 p16.1 36708 ChimerSeq STARFusion TCGA_RNA-Seq FAM49B-LINC00977 FAM49B chr8 130863081 - LINC00977 chr8 130235615 - Exonic hg19 LUSC TCGA-90-7769 9 21 Out-of-frame Intra-chr q24.21 q24.21 36709 ChimerSeq STARFusion TCGA_RNA-Seq ABCA13-BLVRA ABCA13 chr7 48211149 + BLVRA chr7 43843275 + Exonic hg19 LUSC TCGA-90-7769 8 18 Out-of-frame Intra-chr p12.3 p13 Seq+ 36710 ChimerSeq STARFusion TCGA_RNA-Seq AK1-ST6GALNAC4 AK1 chr9 130634102 - ST6GALNAC4 chr9 130674617 - Exonic hg19 LUSC TCGA-90-7769 6 10 In-Frame Intra-chr q34.11 q34.11 Seq+ 36711 ChimerSeq STARFusion TCGA_RNA-Seq WDR18-IGL@ WDR18 chr19 990028 + IGL@ chr22 23247168 + Exonic hg19 LUSC TCGA-90-7766 71 0 Out-of-frame Inter-chr p13.3 q11.22 36712 ChimerSeq STARFusion TCGA_RNA-Seq WDR18-IGLC3 WDR18 chr19 990028 + IGLC3 chr22 23247168 + Exonic hg19 LUSC TCGA-90-7766 71 0 Out-of-frame Inter-chr p13.3 q11.22 36713 ChimerSeq STARFusion TCGA_RNA-Seq WDR18-IGLJ3 WDR18 chr19 990028 + IGLJ3 chr22 23247168 + Exonic hg19 LUSC TCGA-90-7766 71 0 Out-of-frame Inter-chr p13.3 q11.22 36714 ChimerSeq STARFusion TCGA_RNA-Seq FOXJ1-IGL@ FOXJ1 chr17 74136370 - IGL@ chr22 23247171 + Exonic hg19 LUSC TCGA-90-7766 27 1 Out-of-frame Inter-chr q25.1 Transcription factor q11.22 36715 ChimerSeq STARFusion TCGA_RNA-Seq STK16-IGKC STK16 chr2 220110182 + IGKC chr2 89160434 - Exonic hg19 LUSC TCGA-90-7766 24 1 Out-of-frame Intra-chr q35 p11.2 36716 ChimerSeq STARFusion TCGA_RNA-Seq TNFRSF10A-IGKC TNFRSF10A chr8 23060173 - IGKC chr2 89161429 - Exonic hg19 LUSC TCGA-90-7766 16 1 Out-of-frame Inter-chr p21.3 Tumor suppressor gene p11.2 36717 ChimerSeq STARFusion TCGA_RNA-Seq KIF13B-ADAM3A KIF13B chr8 29102863 - ADAM3A chr8 39313023 - Exonic hg19 LUSC TCGA-90-7766 7 27 CDS-3'UTR Intra-chr p12 p11.22 Seq+ 36718 ChimerSeq STARFusion TCGA_RNA-Seq C1QA-IGHG1 C1QA chr1 22965694 + IGHG1 chr14 106209410 - Exonic hg19 LUSC TCGA-90-7766 11 1 Out-of-frame Inter-chr p36.12 q32.33 36719 ChimerSeq STARFusion TCGA_RNA-Seq KIF13B-ADAM3A KIF13B chr8 29102863 - ADAM3A chr8 39311619 - Exonic hg19 LUSC TCGA-90-7766 4 25 CDS-3'UTR Intra-chr p12 p11.22 Seq+ 36720 ChimerSeq STARFusion TCGA_RNA-Seq TNKS1BP1-IGHG2 TNKS1BP1 chr11 57067185 - IGHG2 chr14 106111130 - Exonic hg19 LUSC TCGA-90-7766 9 1 Out-of-frame Inter-chr q12.1 36721 ChimerSeq STARFusion TCGA_RNA-Seq ACTG1-IGH@ ACTG1 chr17 79478384 - IGH@ chr14 106330470 - Exonic hg19 LUSC TCGA-90-7766 4 20 Out-of-frame Inter-chr q25.3 32.33 36722 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF9-IGL@ ARHGEF9 chrX 62855328 - IGL@ chr22 23235962 + Exonic hg19 LUSC TCGA-90-7766 8 1 Out-of-frame Inter-chr q11.2 q11.22 36723 ChimerSeq STARFusion TCGA_RNA-Seq NADSYN1-IGKC NADSYN1 chr11 71208626 + IGKC chr2 89161070 - Exonic hg19 LUSC TCGA-90-7766 8 1 Out-of-frame Inter-chr q13.4 p11.2 36724 ChimerSeq STARFusion TCGA_RNA-Seq NCAPH-KCNIP3 NCAPH chr2 97001586 + KCNIP3 chr2 96040044 + Exonic hg19 LUSC TCGA-90-7767 10 9 In-Frame Intra-chr q11.2 q11.1 Transcription factor Seq+ 36725 ChimerSeq STARFusion TCGA_RNA-Seq MAP1B-PTCD2 MAP1B chr5 71411626 + PTCD2 chr5 71617999 + Exonic hg19 LUSC TCGA-85-6798 2 9 In-Frame Intra-chr q13.2 q13.2 Seq+ 36726 ChimerSeq STARFusion TCGA_RNA-Seq CENPQ-MUT CENPQ chr6 49456397 + MUT chr6 49427218 - Exonic hg19 LUSC TCGA-85-6798 2 6 CDS-5'UTR Intra-chr p12.3 p12.3 Seq+ 36727 ChimerSeq STARFusion TCGA_RNA-Seq RAD51AP1-SLCO1C1 RAD51AP1 chr12 4653070 + SLCO1C1 chr12 20890041 + Exonic hg19 LUSC TCGA-37-3792 15 125 In-Frame Intra-chr p13.32 p12.2 Seq+ 36728 ChimerSeq STARFusion TCGA_RNA-Seq HGS-GNAO1 HGS chr17 79654125 + GNAO1 chr16 56377675 + Exonic hg19 LUSC TCGA-37-3792 13 126 Out-of-frame Inter-chr q25.3 q13 Seq+ 36729 ChimerSeq STARFusion TCGA_RNA-Seq RAD51AP1-SLCO1C1 RAD51AP1 chr12 4653070 + SLCO1C1 chr12 20885843 + Exonic hg19 LUSC TCGA-37-3792 9 123 Out-of-frame Intra-chr p13.32 p12.2 Seq+ 36730 ChimerSeq STARFusion TCGA_RNA-Seq RAD51AP1-SLCO1C1 RAD51AP1 chr12 4653077 + SLCO1C1 chr12 20885843 + Exonic hg19 LUSC TCGA-37-3792 6 123 Out-of-frame Intra-chr p13.32 p12.2 Seq+ 36731 ChimerSeq STARFusion TCGA_RNA-Seq RAD51AP1-SLCO1C1 RAD51AP1 chr12 4655584 + SLCO1C1 chr12 20885843 + Exonic hg19 LUSC TCGA-37-3792 3 123 In-Frame Intra-chr p13.32 p12.2 Seq+ 36732 ChimerSeq STARFusion TCGA_RNA-Seq USP7-CARHSP1 USP7 chr16 9057064 - CARHSP1 chr16 8953192 - Exonic hg19 LUSC TCGA-37-3792 4 16 CDS-5'UTR Intra-chr p13.2 p13.2 36733 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57721844 + VMP1 chr17 57917129 + Exonic hg19 LUSC TCGA-37-3792 4 15 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 36734 ChimerSeq STARFusion TCGA_RNA-Seq IGFBP7-SPINK2 IGFBP7 chr4 57976043 - SPINK2 chr4 57702704 - Exonic hg19 LUSC TCGA-66-2744 37 124 CDS-5'UTR Intra-chr q12 Tumor suppressor gene q12 Seq+ 36735 ChimerSeq STARFusion TCGA_RNA-Seq IGFBP7-SPINK2 IGFBP7 chr4 57976043 - SPINK2 chr4 57686745 - Exonic hg19 LUSC TCGA-66-2744 14 121 In-Frame Intra-chr q12 Tumor suppressor gene q12 Seq+ 36736 ChimerSeq STARFusion TCGA_RNA-Seq ADAL-IGL@ ADAL chr15 43645888 + IGL@ chr22 23247170 + Exonic hg19 LUSC TCGA-66-2744 13 0 Out-of-frame Inter-chr q15.3 q11.22 36737 ChimerSeq STARFusion TCGA_RNA-Seq ADAL-IGLC3 ADAL chr15 43645888 + IGLC3 chr22 23247170 + Exonic hg19 LUSC TCGA-66-2744 13 0 Out-of-frame Inter-chr q15.3 q11.22 36738 ChimerSeq STARFusion TCGA_RNA-Seq PRPF39-FAM179B PRPF39 chr14 45580020 + FAM179B chr14 45540915 + Exonic hg19 LUSC TCGA-66-2744 9 10 Out-of-frame Intra-chr q21.2 36739 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD50-IGL@ ANKRD50 chr4 125633600 - IGL@ chr22 23241804 + Exonic hg19 LUSC TCGA-66-2744 7 1 Out-of-frame Inter-chr q28.1 q11.22 36740 ChimerSeq STARFusion TCGA_RNA-Seq MBOAT7-IGKC MBOAT7 chr19 54684030 - IGKC chr2 89160770 - Exonic hg19 LUSC TCGA-66-2744 7 1 Out-of-frame Inter-chr p11.2 36741 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-PKM IGH@ chr14 106109961 - PKM chr15 72494079 - Exonic hg19 LUSC TCGA-66-2744 4 11 Out-of-frame Inter-chr 32.33 q23 36742 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD50-IGL@ ANKRD50 chr4 125633599 - IGL@ chr22 23247175 + Exonic hg19 LUSC TCGA-66-2744 6 1 Out-of-frame Inter-chr q28.1 q11.22 36743 ChimerSeq STARFusion TCGA_RNA-Seq GPHN-EIF2S1 GPHN chr14 67147903 + EIF2S1 chr14 67831484 + Exonic hg19 LUSC TCGA-66-2744 4 9 CDS-5'UTR Intra-chr q23.3 q23.3 36744 ChimerSeq STARFusion TCGA_RNA-Seq IGHG2-PKM IGHG2 chr14 106109961 - PKM chr15 72494079 - Exonic hg19 LUSC TCGA-66-2744 4 5 Out-of-frame Inter-chr q23 36745 ChimerSeq STARFusion TCGA_RNA-Seq ZMYM2-DMRT2 ZMYM2 chr13 20611049 + DMRT2 chr9 1051570 + Exonic hg19 LUSC TCGA-66-2744 2 11 CDS-5'UTR Inter-chr q12.11 p24.3 Transcription factor Seq+ 36746 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-HSP90AA1 IGL@ chr22 22764614 + HSP90AA1 chr14 102549601 - Exonic hg19 LUSC TCGA-66-2744 3 5 Out-of-frame Inter-chr q11.22 q32.31 Oncogene 36747 ChimerSeq STARFusion TCGA_RNA-Seq SBF2-EIF4G2 SBF2 chr11 10315562 - EIF4G2 chr11 10828928 - Exonic hg19 LUSC TCGA-66-2744 2 5 CDS-5'UTR Intra-chr p15.4 p15.4 Seq+ 36748 ChimerSeq STARFusion TCGA_RNA-Seq PHLDB2-RIMS2 PHLDB2 chr3 111451550 + RIMS2 chr8 105160835 + Exonic hg19 LUSC TCGA-66-2742 8 18 5'UTR-CDS Inter-chr q13.2 q22.3 Seq+ 36749 ChimerSeq STARFusion TCGA_RNA-Seq PLCXD2-RIMS2 PLCXD2 chr3 111451550 + RIMS2 chr8 105160835 + Exonic hg19 LUSC TCGA-66-2742 8 18 3'UTR-CDS Inter-chr q13.2 q22.3 Seq+ 36750 ChimerSeq STARFusion TCGA_RNA-Seq RIN2-IGL@ RIN2 chr20 19937331 + IGL@ chr22 23162204 + Exonic hg19 LUSC TCGA-66-2742 6 1 Out-of-frame Inter-chr p11.23 q11.22 36751 ChimerSeq STARFusion TCGA_RNA-Seq RIN2-IGLC2 RIN2 chr20 19937331 + IGLC2 chr22 23162204 + Exonic hg19 LUSC TCGA-66-2742 6 1 Out-of-frame Inter-chr p11.23 q11.22 36752 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-RPL28 IGL@ chr22 22764616 + RPL28 chr19 55897165 + Exonic hg19 LUSC TCGA-66-2742 3 4 Out-of-frame Inter-chr q11.22 q13.42 36753 ChimerSeq STARFusion TCGA_RNA-Seq RPL35A-IGL@ RPL35A chr3 197680448 + IGL@ chr22 23247175 + Exonic hg19 LUSC TCGA-77-8008 8 1 Out-of-frame Inter-chr q29 q11.22 36754 ChimerSeq STARFusion TCGA_RNA-Seq PHGDH-HMGCS2 PHGDH chr1 120283141 + HMGCS2 chr1 120295297 - Exonic hg19 LUSC TCGA-85-8277 54 279 In-Frame Intra-chr p12 p12 Seq+ 36755 ChimerSeq STARFusion TCGA_RNA-Seq PHGDH-LINC00623 PHGDH chr1 120254783 + LINC00623 chr1 144301536 - Exonic hg19 LUSC TCGA-85-8277 38 249 Out-of-frame Intra-chr p12 p11.2 36756 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525072 - IGHG1 chr14 106209410 - Exonic hg19 LUSC TCGA-85-8277 86 0 Out-of-frame Inter-chr q34 Oncogene q32.33 36757 ChimerSeq STARFusion TCGA_RNA-Seq PHGDH-LINC00623 PHGDH chr1 120269725 + LINC00623 chr1 144301536 - Exonic hg19 LUSC TCGA-85-8277 16 249 Out-of-frame Intra-chr p12 p11.2 36758 ChimerSeq STARFusion TCGA_RNA-Seq ACAP2-ATP13A3 ACAP2 chr3 195101738 - ATP13A3 chr3 194134568 - Exonic hg19 LUSC TCGA-85-8277 17 86 In-Frame Intra-chr q29 q29 36759 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2-SEC22B NOTCH2 chr1 120539620 - SEC22B chr1 145115735 + Exonic hg19 LUSC TCGA-85-8277 11 83 In-Frame Intra-chr p12 Oncogene Tumor suppressor gene p12 Seq+ 36760 ChimerSeq STARFusion TCGA_RNA-Seq SIRT6-CREB3L3 SIRT6 chr19 4180779 - CREB3L3 chr19 4156995 + Exonic hg19 LUSC TCGA-85-8277 6 70 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p13.3 Transcription factor Seq+ 36761 ChimerSeq STARFusion TCGA_RNA-Seq SIRT6-CREB3L3 SIRT6 chr19 4180779 - CREB3L3 chr19 4156992 + Exonic hg19 LUSC TCGA-85-8277 5 69 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p13.3 Transcription factor Seq+ 36762 ChimerSeq STARFusion TCGA_RNA-Seq COASY-IGHG2 COASY chr17 40714608 + IGHG2 chr14 106111129 - Exonic hg19 LUSC TCGA-85-8277 12 1 Out-of-frame Inter-chr q21.2 36763 ChimerSeq STARFusion TCGA_RNA-Seq COASY-IGHG2 COASY chr17 40714610 + IGHG2 chr14 106209408 - Exonic hg19 LUSC TCGA-85-8277 6 1 Out-of-frame Inter-chr q21.2 36764 ChimerSeq STARFusion TCGA_RNA-Seq RASA2-KALRN RASA2 chr3 141206058 + KALRN chr3 124017638 + Exonic hg19 LUSC TCGA-85-8277 2 14 Out-of-frame Intra-chr q23 q21.1 Seq+ 36765 ChimerSeq STARFusion TCGA_RNA-Seq ZNF335-NCOA5 ZNF335 chr20 44577542 - NCOA5 chr20 44693867 - Exonic hg19 LUSC TCGA-85-8277 3 4 3'UTR-CDS Intra-chr q13.12 Transcription factor q13.12 Tumor suppressor gene Seq+ 36766 ChimerSeq STARFusion TCGA_RNA-Seq NRBP1-IGHG1 NRBP1 chr2 27664675 + IGHG1 chr14 106209409 - Exonic hg19 LUSC TCGA-85-8276 18 1 Out-of-frame Inter-chr p23.3 Other:NRBP Tumor suppressor gene q32.33 36767 ChimerSeq STARFusion TCGA_RNA-Seq MBOAT7-IGKC MBOAT7 chr19 54684030 - IGKC chr2 89160770 - Exonic hg19 LUSC TCGA-85-8276 17 1 Out-of-frame Inter-chr p11.2 36768 ChimerSeq STARFusion TCGA_RNA-Seq GPD1L-CMTM7 GPD1L chr3 32188226 + CMTM7 chr3 32483332 + Exonic hg19 LUSC TCGA-85-8276 8 36 In-Frame Intra-chr p22.3 p22.3 Seq+ 36769 ChimerSeq STARFusion TCGA_RNA-Seq PLCXD1-IGHG2 PLCXD1 chrX 209756 + IGHG2 chr14 106111129 - Exonic hg19 LUSC TCGA-85-8276 16 0 Out-of-frame Inter-chr p22.33 36770 ChimerSeq STARFusion TCGA_RNA-Seq EHD2-IGHG3 EHD2 chr19 48244328 + IGHG3 chr14 106330058 - Exonic hg19 LUSC TCGA-85-8276 14 1 Out-of-frame Inter-chr q13.33 36771 ChimerSeq STARFusion TCGA_RNA-Seq EHD2-IGHJ5 EHD2 chr19 48244328 + IGHJ5 chr14 106330058 - Exonic hg19 LUSC TCGA-85-8276 14 1 Out-of-frame Inter-chr q13.33 36772 ChimerSeq STARFusion TCGA_RNA-Seq RTKN-RPL35 RTKN chr2 74668833 - RPL35 chr9 127622505 - Exonic hg19 LUSC TCGA-85-8276 7 19 Out-of-frame Inter-chr p13.1 q33.3 36773 ChimerSeq STARFusion TCGA_RNA-Seq EHD2-IGHG3 EHD2 chr19 48244328 + IGHG3 chr14 106331651 - Exonic hg19 LUSC TCGA-85-8276 11 1 Out-of-frame Inter-chr q13.33 36774 ChimerSeq STARFusion TCGA_RNA-Seq STMN3-IGHG3 STMN3 chr20 62284004 - IGHG3 chr14 106331458 - Exonic hg19 LUSC TCGA-85-8276 11 1 Out-of-frame Inter-chr q13.33 36775 ChimerSeq STARFusion TCGA_RNA-Seq AHNAK-DPF2 AHNAK chr11 62259204 - DPF2 chr11 65116321 + Exonic hg19 LUSC TCGA-85-8276 4 20 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q13.1 Seq+ 36776 ChimerSeq STARFusion TCGA_RNA-Seq RXRA-IGHG2 RXRA chr9 137326058 + IGHG2 chr14 106111065 - Exonic hg19 LUSC TCGA-85-8276 8 1 Out-of-frame Inter-chr q34.2 Transcription factor 36777 ChimerSeq STARFusion TCGA_RNA-Seq NRBP1-IGHG1 NRBP1 chr2 27664675 + IGHG1 chr14 106237744 - Exonic hg19 LUSC TCGA-85-8276 7 1 Out-of-frame Inter-chr p23.3 Other:NRBP Tumor suppressor gene q32.33 36778 ChimerSeq STARFusion TCGA_RNA-Seq PACS1-CHKA PACS1 chr11 65838313 + CHKA chr11 67821514 - Exonic hg19 LUSC TCGA-85-8276 5 8 Out-of-frame Intra-chr q13.1 q13.2 Seq+ 36779 ChimerSeq STARFusion TCGA_RNA-Seq AHNAK-DPF2 AHNAK chr11 62302475 - DPF2 chr11 65116321 + Exonic hg19 LUSC TCGA-85-8276 2 19 In-Frame Intra-chr q12.3 Tumor suppressor gene q13.1 Seq+ 36780 ChimerSeq STARFusion TCGA_RNA-Seq COLGALT2-IGL@ COLGALT2 chr1 183923960 - IGL@ chr22 23248512 + Exonic hg19 LUSC TCGA-85-8276 5 1 Out-of-frame Inter-chr q25.3 q11.22 36781 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-GPR124 WHSC1L1 chr8 38194823 - GPR124 chr8 37672414 + Exonic hg19 LUSC TCGA-85-8276 3 4 Out-of-frame Intra-chr p11.23 Tumor suppressor gene 36782 ChimerSeq STARFusion TCGA_RNA-Seq FOXP4-CCND3 FOXP4 chr6 41545819 + CCND3 chr6 41908323 - Exonic hg19 LUSC TCGA-46-3769 9 162 In-Frame Intra-chr p21.1 Oncogene Transcription factor p21.1 Seq+ 36783 ChimerSeq STARFusion TCGA_RNA-Seq FOXP4-CCND3 FOXP4 chr6 41552629 + CCND3 chr6 41905132 - Exonic hg19 LUSC TCGA-46-3769 7 161 In-Frame Intra-chr p21.1 Oncogene Transcription factor p21.1 Seq+ 36784 ChimerSeq STARFusion TCGA_RNA-Seq FOXP4-CCND3 FOXP4 chr6 41552629 + CCND3 chr6 41908323 - Exonic hg19 LUSC TCGA-46-3769 5 161 In-Frame Intra-chr p21.1 Oncogene Transcription factor p21.1 Seq+ 36785 ChimerSeq STARFusion TCGA_RNA-Seq FOXP4-CCND3 FOXP4 chr6 41533702 + CCND3 chr6 41905132 - Exonic hg19 LUSC TCGA-46-3769 3 161 In-Frame Intra-chr p21.1 Oncogene Transcription factor p21.1 Seq+ 36786 ChimerSeq STARFusion TCGA_RNA-Seq FOXP4-CCND3 FOXP4 chr6 41545819 + CCND3 chr6 41905132 - Exonic hg19 LUSC TCGA-46-3769 3 161 In-Frame Intra-chr p21.1 Oncogene Transcription factor p21.1 Seq+ 36787 ChimerSeq STARFusion TCGA_RNA-Seq LRRC1-TINAG LRRC1 chr6 53707025 + TINAG chr6 54208024 + Exonic hg19 LUSC TCGA-46-3769 17 85 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 36788 ChimerSeq STARFusion TCGA_RNA-Seq CAMTA1-DHRS3 CAMTA1 chr1 6845635 + DHRS3 chr1 12640694 - Exonic hg19 LUSC TCGA-46-3769 20 52 In-Frame Intra-chr p36.31 Tumor suppressor gene Transcription factor p36.21 Seq+ 36789 ChimerSeq STARFusion TCGA_RNA-Seq LRRC1-TINAG LRRC1 chr6 53707025 + TINAG chr6 54214514 + Exonic hg19 LUSC TCGA-46-3769 4 84 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 36790 ChimerSeq STARFusion TCGA_RNA-Seq THAP3-CAMTA1 THAP3 chr1 6685352 + CAMTA1 chr1 6880241 + Exonic hg19 LUSC TCGA-46-3769 5 41 Out-of-frame Intra-chr p36.31 Transcription factor p36.31 Tumor suppressor gene Transcription factor Seq+ 36791 ChimerSeq STARFusion TCGA_RNA-Seq AFAP1-SLC45A1 AFAP1 chr4 7802169 - SLC45A1 chr1 8384366 + Exonic hg19 LUSC TCGA-46-3769 8 28 CDS-5'UTR Inter-chr p16.1 p36.23 Seq+ 36792 ChimerSeq STARFusion TCGA_RNA-Seq GPC6-SMG1 GPC6 chr13 95055810 + SMG1 chr16 18816264 - Exonic hg19 LUSC TCGA-46-3769 5 6 Out-of-frame Inter-chr q31.3 p12.3 Atypical:PIKK Seq+ 36793 ChimerSeq STARFusion TCGA_RNA-Seq ME2-MRO ME2 chr18 48405678 + MRO chr18 48333220 - Exonic hg19 LUSC TCGA-46-3769 2 8 5'UTR-CDS Intra-chr q21.2 q21.2 Seq+ 36794 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 LUSC TCGA-46-3768 9 0 Out-of-frame Inter-chr q13.33 p21.1 36795 ChimerSeq STARFusion TCGA_RNA-Seq UBAP1-KIF24 UBAP1 chr9 34220946 + KIF24 chr9 34271928 - Exonic hg19 LUSC TCGA-46-3768 5 16 In-Frame Intra-chr p13.3 p13.3 36796 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG4 STK25 chr2 242434915 - IGHG4 chr14 106136184 - Exonic hg19 LUSC TCGA-46-3767 114 1 Out-of-frame Inter-chr q37.3 36797 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG4 STK25 chr2 242434915 - IGHG4 chr14 106092405 - Exonic hg19 LUSC TCGA-46-3767 53 1 Out-of-frame Inter-chr q37.3 36798 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG4 STK25 chr2 242434915 - IGHG4 chr14 106111129 - Exonic hg19 LUSC TCGA-46-3767 23 1 Out-of-frame Inter-chr q37.3 36799 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-FAM84B IGH@ chr14 107034728 - FAM84B chr8 127566142 - Exonic hg19 LUSC TCGA-46-3767 12 1 Out-of-frame Inter-chr 32.33 q24.21 36800 ChimerSeq STARFusion TCGA_RNA-Seq SACS-MIPEP SACS chr13 23985359 - MIPEP chr13 24415627 - Exonic hg19 LUSC TCGA-46-3767 5 16 In-Frame Intra-chr q12.12 q12.12 Seq+ 36801 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSD1 PRSS27 chr16 2763530 - TPSD1 chr16 1308333 + Exonic hg19 LUSC TCGA-46-3767 6 2 In-Frame Intra-chr p13.3 p13.3 36802 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-COL1A2 IGH@ chr14 106725199 - COL1A2 chr7 94024353 + Exonic hg19 LUSC TCGA-46-3766 5 113 Out-of-frame Inter-chr 32.33 q21.3 36803 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-ARIH1 IGL@ chr22 23117161 + ARIH1 chr15 72873268 + Exonic hg19 LUSC TCGA-46-3766 13 0 Out-of-frame Inter-chr q11.22 q24.1 36804 ChimerSeq STARFusion TCGA_RNA-Seq LAMC2-OAS2 LAMC2 chr1 183187623 + OAS2 chr12 113416401 + Exonic hg19 LUSC TCGA-46-3766 3 10 CDS-5'UTR Inter-chr q25.3 q24.13 Seq+ 36805 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-MRPS2 IGH@ chr14 107034728 - MRPS2 chr9 138392848 + Exonic hg19 LUSC TCGA-46-3765 30 1 Out-of-frame Inter-chr 32.33 q34.3 36806 ChimerSeq STARFusion TCGA_RNA-Seq MCCC1-ADAMTSL3 MCCC1 chr3 182817140 - ADAMTSL3 chr15 84558861 + Exonic hg19 LUSC TCGA-46-3765 7 35 Out-of-frame Inter-chr q27.1 q25.2 Seq+ 36807 ChimerSeq STARFusion TCGA_RNA-Seq MTF2-CTNND2 MTF2 chr1 93545088 + CTNND2 chr5 11199773 - Exonic hg19 LUSC TCGA-46-3765 7 27 Out-of-frame Inter-chr p22.1 Transcription factor p15.2 Seq+ 36808 ChimerSeq STARFusion TCGA_RNA-Seq DUSP12-CR2 DUSP12 chr1 161719935 + CR2 chr1 207658809 + Exonic hg19 LUSC TCGA-46-3765 5 23 In-Frame Intra-chr q23.3 q32.2 Seq+ 36809 ChimerSeq STARFusion TCGA_RNA-Seq DGCR8-CRKL DGCR8 chr22 20096526 + CRKL chr22 21288067 + Exonic hg19 LUSC TCGA-46-3765 2 23 Out-of-frame Intra-chr q11.21 q11.21 Oncogene Seq+ 36810 ChimerSeq STARFusion TCGA_RNA-Seq PKD1-IGL@ PKD1 chr16 2158741 - IGL@ chr22 23243156 + Exonic hg19 LUSC TCGA-46-3765 7 1 Out-of-frame Inter-chr p13.3 CAMK:PKD Tumor suppressor gene q11.22 36811 ChimerSeq STARFusion TCGA_RNA-Seq PKD1-IGLC2 PKD1 chr16 2158741 - IGLC2 chr22 23243156 + Exonic hg19 LUSC TCGA-46-3765 7 1 Out-of-frame Inter-chr p13.3 CAMK:PKD Tumor suppressor gene q11.22 36812 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT1-KIAA1045 B4GALT1 chr9 33120417 - KIAA1045 chr9 34971292 + Exonic hg19 LUSC TCGA-46-3765 5 8 CDS-5'UTR Intra-chr p21.1 Seq+ 36813 ChimerSeq STARFusion TCGA_RNA-Seq CHRM3-CASQ1 CHRM3 chr1 239990678 + CASQ1 chr1 160162592 + Exonic hg19 LUSC TCGA-46-3765 2 12 5'UTR-CDS Intra-chr q43 q23.2 Seq+ 36814 ChimerSeq STARFusion TCGA_RNA-Seq RNF217-TPD52L1 RNF217 chr6 125398004 + TPD52L1 chr6 125541224 + Exonic hg19 LUSC TCGA-46-3765 3 7 In-Frame Intra-chr q22.31 q22.31 36815 ChimerSeq STARFusion TCGA_RNA-Seq USP48-MAN1C1 USP48 chr1 22109317 - MAN1C1 chr1 26110154 + Exonic hg19 LUSC TCGA-85-8070 133 945 In-Frame Intra-chr p36.12 p36.11 Seq+ 36816 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1522-IGH@ KIAA1522 chr1 33235847 + IGH@ chr14 106331650 - Exonic hg19 LUSC TCGA-85-8070 30 1 Out-of-frame Inter-chr p35.1 32.33 36817 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1522-IGHG3 KIAA1522 chr1 33235847 + IGHG3 chr14 106331650 - Exonic hg19 LUSC TCGA-85-8070 30 1 Out-of-frame Inter-chr p35.1 36818 ChimerSeq STARFusion TCGA_RNA-Seq USP48-SEPN1 USP48 chr1 22109317 - SEPN1 chr1 26131633 + Exonic hg19 LUSC TCGA-85-8070 11 77 Out-of-frame Intra-chr p36.12 Seq+ 36819 ChimerSeq STARFusion TCGA_RNA-Seq USP48-SEPN1 USP48 chr1 22109317 - SEPN1 chr1 26127534 + Exonic hg19 LUSC TCGA-85-8070 5 76 Out-of-frame Intra-chr p36.12 Seq+ 36820 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG3 STK25 chr2 242434915 - IGHG3 chr14 106237745 - Exonic hg19 LUSC TCGA-85-8070 14 1 Out-of-frame Inter-chr q37.3 36821 ChimerSeq STARFusion TCGA_RNA-Seq DDHD2-EIF4EBP1 DDHD2 chr8 38111236 + EIF4EBP1 chr8 37914599 + Exonic hg19 LUSC TCGA-85-8070 4 36 Out-of-frame Intra-chr p11.23 p11.23 Seq+ 36822 ChimerSeq STARFusion TCGA_RNA-Seq DAPP1-SLC4A4 DAPP1 chr4 100774505 + SLC4A4 chr4 72399944 + Exonic hg19 LUSC TCGA-85-8070 6 23 In-Frame Intra-chr q23 q13.3 Seq+ 36823 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-MYH3 YWHAE chr17 1303341 - MYH3 chr17 10533775 - Exonic hg19 LUSC TCGA-63-A5MN 8 26 Out-of-frame Intra-chr p13.3 p13.1 Seq+ 36824 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-EIF3K ACTN4 chr19 39138547 + EIF3K chr19 39123070 + Exonic hg19 LUSC TCGA-63-A5MM 92 352 In-Frame Intra-chr Seq+ 36825 ChimerSeq STARFusion TCGA_RNA-Seq DCTN3-LINGO2 DCTN3 chr9 34618673 - LINGO2 chr9 28670278 - Exonic hg19 LUSC TCGA-63-A5MM 8 26 CDS-5'UTR Intra-chr p13.3 p21.1 Seq+ 36826 ChimerSeq STARFusion TCGA_RNA-Seq MTAP-EEF1A2 MTAP chr9 21802780 + EEF1A2 chr20 62127388 - Exonic hg19 LUSC TCGA-63-A5MM 3 31 In-Frame Inter-chr p21.3 Tumor suppressor gene q13.33 Seq+ 36827 ChimerSeq STARFusion TCGA_RNA-Seq FOCAD-ELAVL2 FOCAD chr9 20823114 + ELAVL2 chr9 23765097 - Exonic hg19 LUSC TCGA-63-A5MM 2 14 CDS-5'UTR Intra-chr p21.3 p21.3 Seq+ 36828 ChimerSeq STARFusion TCGA_RNA-Seq FOCAD-ELAVL2 FOCAD chr9 20823114 + ELAVL2 chr9 23762247 - Exonic hg19 LUSC TCGA-63-A5MM 2 14 CDS-5'UTR Intra-chr p21.3 p21.3 Seq+ 36829 ChimerSeq STARFusion TCGA_RNA-Seq PAN3-GSX1 PAN3 chr13 28846208 + GSX1 chr13 28366027 + Exonic hg19 LUSC TCGA-63-A5MM 3 9 CDS-5'UTR Intra-chr q12.2 q12.2 Transcription factor 36830 ChimerSeq STARFusion TCGA_RNA-Seq FKBP10-JUP FKBP10 chr17 39976966 + JUP chr17 39911115 - Exonic hg19 LUSC TCGA-63-A5ML 14 58 Out-of-frame Intra-chr q21.2 q21.2 Tumor suppressor gene Seq+ 36831 ChimerSeq STARFusion TCGA_RNA-Seq JUP-EIF1 JUP chr17 39942840 - EIF1 chr17 39846030 + Exonic hg19 LUSC TCGA-63-A5ML 8 32 5'UTR-CDS Intra-chr q21.2 Tumor suppressor gene q21.2 36832 ChimerSeq STARFusion TCGA_RNA-Seq JUP-EIF1 JUP chr17 39942840 - EIF1 chr17 39845144 + Exonic hg19 LUSC TCGA-63-A5ML 3 26 5'UTR-5'UTR Intra-chr q21.2 Tumor suppressor gene q21.2 36833 ChimerSeq STARFusion TCGA_RNA-Seq EML1-ADAMDEC1 EML1 chr14 100259880 + ADAMDEC1 chr8 24241972 + Exonic hg19 LUSC TCGA-63-A5ML 5 6 CDS-5'UTR Inter-chr q32.2 p21.2 Seq+ 36834 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 LUSC TCGA-63-A5ML 5 1 Out-of-frame Inter-chr q13.33 p21.1 36835 ChimerSeq STARFusion TCGA_RNA-Seq HEATR5A-HECTD1 HEATR5A chr14 31771501 - HECTD1 chr14 31602620 - Exonic hg19 LUSC TCGA-63-A5ML 3 9 In-Frame Intra-chr q12 q12 36836 ChimerSeq STARFusion TCGA_RNA-Seq EML1-ADAMDEC1 EML1 chr14 100259880 + ADAMDEC1 chr8 24249775 + Exonic hg19 LUSC TCGA-63-A5ML 2 6 In-Frame Inter-chr q32.2 p21.2 Seq+ 36837 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-RGS20 PVT1 chr8 128806980 + RGS20 chr8 54826057 + Exonic hg19 LUSC TCGA-63-A5MJ 90 535 5'UTR-CDS Intra-chr q24.21 q11.23 Seq+ 36838 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-RGS20 PVT1 chr8 128867565 + RGS20 chr8 54826057 + Exonic hg19 LUSC TCGA-63-A5MJ 31 535 5'UTR-CDS Intra-chr q24.21 q11.23 Seq+ 36839 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-RGS20 PVT1 chr8 128806980 + RGS20 chr8 54852136 + Exonic hg19 LUSC TCGA-63-A5MJ 18 535 5'UTR-CDS Intra-chr q24.21 q11.23 Seq+ 36840 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-RGS20 PVT1 chr8 128808254 + RGS20 chr8 54826057 + Exonic hg19 LUSC TCGA-63-A5MJ 9 535 Out-of-frame Intra-chr q24.21 q11.23 Seq+ 36841 ChimerSeq STARFusion TCGA_RNA-Seq FAT1-IRF2 FAT1 chr4 187530337 - IRF2 chr4 185350224 - Exonic hg19 LUSC TCGA-63-A5MJ 35 137 CDS-5'UTR Intra-chr q35.2 Tumor suppressor gene q35.1 Transcription factor Seq+ 36842 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 LUSC TCGA-63-A5MJ 14 0 Out-of-frame Inter-chr q13.33 p21.1 36843 ChimerSeq STARFusion TCGA_RNA-Seq POLR3K-EMC10 POLR3K chr16 103476 - EMC10 chr19 50981186 + Exonic hg19 LUSC TCGA-63-A5MI 2 9 Out-of-frame Inter-chr p13.3 q13.33 Seq+ 36844 ChimerSeq STARFusion TCGA_RNA-Seq PHTF2-RSBN1L PHTF2 chr7 77469617 + RSBN1L chr7 77402464 + Exonic hg19 LUSC TCGA-63-A5MI 2 6 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 36845 ChimerSeq STARFusion TCGA_RNA-Seq PEX14-PRG4 PEX14 chr1 10555378 + PRG4 chr1 186281901 + Exonic hg19 LUSC TCGA-63-A5MH 5 32 Out-of-frame Intra-chr p36.22 q31.1 Seq+ 36846 ChimerSeq STARFusion TCGA_RNA-Seq ECHDC1-MYO6 ECHDC1 chr6 127652055 - MYO6 chr6 76599775 + Exonic hg19 LUSC TCGA-63-A5MH 3 22 Out-of-frame Intra-chr q22.33 q14.1 Seq+ 36847 ChimerSeq STARFusion TCGA_RNA-Seq GIPR-IGHG3 GIPR chr19 46184883 + IGHG3 chr14 106237745 - Exonic hg19 LUSC TCGA-63-A5MG 26 0 Out-of-frame Inter-chr q13.32 36848 ChimerSeq STARFusion TCGA_RNA-Seq UQCC2-IGL@ UQCC2 chr6 33664546 - IGL@ chr22 23247171 + Exonic hg19 LUSC TCGA-63-A5MG 7 1 Out-of-frame Inter-chr p21.31 q11.22 36849 ChimerSeq STARFusion TCGA_RNA-Seq LMTK2-IMMP2L LMTK2 chr7 97800986 + IMMP2L chr7 110603621 - Exonic hg19 LUSC TCGA-63-A5MG 4 7 In-Frame Intra-chr q21.3 q31.1 Seq+ 36850 ChimerSeq STARFusion TCGA_RNA-Seq TMSB10-HAP1 TMSB10 chr2 85133241 + HAP1 chr17 39877727 - Exonic hg19 LUSC TCGA-63-A5MG 5 3 CDS-3'UTR Inter-chr p11.2 q21.2 36851 ChimerSeq STARFusion TCGA_RNA-Seq CCAT1-CASC8 CCAT1 chr8 128231055 - CASC8 chr8 128302305 - Exonic hg19 LUSC TCGA-63-A5MB 17 104 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 36852 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-ADAM23 SNHG3 chr1 28836616 + ADAM23 chr2 207437845 + Exonic hg19 LUSC TCGA-63-A5MB 3 11 Out-of-frame Inter-chr p35.3 q33.3 Seq+ 36853 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-ADAM23 RCC1 chr1 28836616 + ADAM23 chr2 207437845 + Exonic hg19 LUSC TCGA-63-A5MB 3 7 Out-of-frame Inter-chr p35.3 q33.3 Seq+ 36854 ChimerSeq STARFusion TCGA_RNA-Seq NANP-FAM182A NANP chr20 25604495 - FAM182A chr20 26049553 + Exonic hg19 LUSC TCGA-63-A5MB 3 5 CDS-5'UTR Intra-chr p11.21 p11.1 36855 ChimerSeq STARFusion TCGA_RNA-Seq RAI1-IFT20 RAI1 chr17 17627473 + IFT20 chr17 26659013 - Exonic hg19 LUSC TCGA-33-4533 63 294 5'UTR-5'UTR Intra-chr p11.2 q11.2 Seq+ 36856 ChimerSeq STARFusion TCGA_RNA-Seq ADCY9-PRKCB ADCY9 chr16 4163751 - PRKCB chr16 23999829 + Exonic hg19 LUSC TCGA-33-4533 5 24 In-Frame Intra-chr p13.3 p12.2 Tumor suppressor gene Seq+ 36857 ChimerSeq STARFusion TCGA_RNA-Seq DRG1-MYO18B DRG1 chr22 31799190 + MYO18B chr22 26317224 + Exonic hg19 LUSC TCGA-33-4532 57 179 In-Frame Intra-chr q12.2 Tumor suppressor gene q12.1 Tumor suppressor gene Seq+ 36858 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS17-CERS3 ADAMTS17 chr15 100692817 - CERS3 chr15 100996251 - Exonic hg19 LUSC TCGA-33-4532 6 46 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 36859 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS17-CERS3 ADAMTS17 chr15 100692817 - CERS3 chr15 100943070 - Exonic hg19 LUSC TCGA-33-4532 6 46 In-Frame Intra-chr q26.3 q26.3 Seq+ 36860 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS17-CERS3 ADAMTS17 chr15 100692817 - CERS3 chr15 100996175 - Exonic hg19 LUSC TCGA-33-4532 4 46 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 36861 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-UNC45B KANSL1 chr17 44248221 - UNC45B chr17 33507578 + Exonic hg19 LUSC TCGA-33-4532 8 21 In-Frame Intra-chr q12 Seq+ 36862 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-UNC45B KANSL1 chr17 44248221 - UNC45B chr17 33504036 + Exonic hg19 LUSC TCGA-33-4532 3 21 Out-of-frame Intra-chr q12 Seq+ 36863 ChimerSeq STARFusion TCGA_RNA-Seq RAB9A-TRAPPC2 RAB9A chrX 13722021 + TRAPPC2 chrX 13738101 - Exonic hg19 LUSC TCGA-63-A5MY 23 136 5'UTR-5'UTR Intra-chr p22.2 p22.2 Seq+ 36864 ChimerSeq STARFusion TCGA_RNA-Seq PDE4D-KHDRBS3 PDE4D chr5 58476421 - KHDRBS3 chr8 136533480 + Exonic hg19 LUSC TCGA-63-A5MY 31 92 In-Frame Inter-chr q12.1 q24.23 Seq+ 36865 ChimerSeq STARFusion TCGA_RNA-Seq RAB9A-TRAPPC2 RAB9A chrX 13707407 + TRAPPC2 chrX 13738101 - Exonic hg19 LUSC TCGA-63-A5MY 7 101 5'UTR-5'UTR Intra-chr p22.2 p22.2 Seq+ 36866 ChimerSeq STARFusion TCGA_RNA-Seq TP63-TPRG1 TP63 chr3 189590784 + TPRG1 chr3 188956522 + Exonic hg19 LUSC TCGA-63-A5MY 2 21 In-Frame Intra-chr q28 Tumor suppressor gene Transcription factor q28 Seq+ 36867 ChimerSeq STARFusion TCGA_RNA-Seq TP63-TPRG1 TP63 chr3 189526315 + TPRG1 chr3 188925165 + Exonic hg19 LUSC TCGA-63-A5MY 2 21 CDS-5'UTR Intra-chr q28 Tumor suppressor gene Transcription factor q28 Seq+ 36868 ChimerSeq STARFusion TCGA_RNA-Seq RNF180-GPX8 RNF180 chr5 63513223 + GPX8 chr5 54459883 + Exonic hg19 LUSC TCGA-63-A5MY 3 10 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q11.2 Seq+ 36869 ChimerSeq STARFusion TCGA_RNA-Seq TXN2-MYH9 TXN2 chr22 36876622 - MYH9 chr22 36745300 - Exonic hg19 LUSC TCGA-63-A5MY 3 6 CDS-5'UTR Intra-chr q12.3 q12.3 Oncogene Tumor suppressor gene Seq+ 36870 ChimerSeq STARFusion TCGA_RNA-Seq VCL-ADK VCL chr10 75758133 + ADK chr10 76349040 + Exonic hg19 LUSC TCGA-63-A5MW 14 111 In-Frame Intra-chr q22.2 q22.2 Seq+ 36871 ChimerSeq STARFusion TCGA_RNA-Seq VCL-ADK VCL chr10 75758133 + ADK chr10 76285014 + Exonic hg19 LUSC TCGA-63-A5MW 14 108 In-Frame Intra-chr q22.2 q22.2 Seq+ 36872 ChimerSeq STARFusion TCGA_RNA-Seq BOC-SIDT1 BOC chr3 112997630 + SIDT1 chr3 113320435 + Exonic hg19 LUSC TCGA-63-A5MW 10 83 In-Frame Intra-chr q13.2 q13.2 Seq+ 36873 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-STK24 NIPBL chr5 36877280 + STK24 chr13 99171727 - Exonic hg19 LUSC TCGA-63-A5MW 12 40 5'UTR-CDS Inter-chr p13.2 q32.2 Seq+ 36874 ChimerSeq STARFusion TCGA_RNA-Seq SLC44A1-FSD1L SLC44A1 chr9 108097980 + FSD1L chr9 108308639 + Exonic hg19 LUSC TCGA-63-A5MW 7 29 Out-of-frame Intra-chr q31.1 q31.2 Seq+ 36875 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN9-TTC38 TSPAN9 chr12 3192885 + TTC38 chr22 46688688 + Exonic hg19 LUSC TCGA-63-A5MW 2 36 5'UTR-CDS Inter-chr p13.33 q13.31 Seq+ 36876 ChimerSeq STARFusion TCGA_RNA-Seq EIF2S1-PLEKHH1 EIF2S1 chr14 67843307 + PLEKHH1 chr14 68026325 + Exonic hg19 LUSC TCGA-63-A5MW 6 12 Out-of-frame Intra-chr q23.3 q24.1 Seq+ 36877 ChimerSeq STARFusion TCGA_RNA-Seq RAB30-CCDC90B RAB30 chr11 82782733 - CCDC90B chr11 82977021 - Exonic hg19 LUSC TCGA-63-A5MW 4 8 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 36878 ChimerSeq STARFusion TCGA_RNA-Seq USP7-CARHSP1 USP7 chr16 9057064 - CARHSP1 chr16 8953192 - Exonic hg19 LUSC TCGA-63-A5MW 2 14 CDS-5'UTR Intra-chr p13.2 p13.2 36879 ChimerSeq STARFusion TCGA_RNA-Seq TMEM126A-EED TMEM126A chr11 85359133 + EED chr11 85961338 + Exonic hg19 LUSC TCGA-63-A5MW 2 13 5'UTR-CDS Intra-chr q14.1 q14.2 Tumor suppressor gene Seq+ 36880 ChimerSeq STARFusion TCGA_RNA-Seq TNFRSF19-MIPEP TNFRSF19 chr13 24200931 + MIPEP chr13 24330757 - Exonic hg19 LUSC TCGA-63-A5MW 2 8 Out-of-frame Intra-chr q12.12 q12.12 36881 ChimerSeq STARFusion TCGA_RNA-Seq FXR1-FGF10 FXR1 chr3 180630524 + FGF10 chr5 44389158 - Exonic hg19 LUSC TCGA-63-A5MV 24 36 5'UTR-5'UTR Inter-chr q26.33 p12 Seq+ 36882 ChimerSeq STARFusion TCGA_RNA-Seq ATP11B-TPRG1 ATP11B chr3 182566345 + TPRG1 chr3 188741539 + Exonic hg19 LUSC TCGA-63-A5MV 8 21 CDS-5'UTR Intra-chr q26.33 Oncogene q28 Seq+ 36883 ChimerSeq STARFusion TCGA_RNA-Seq POMK-ST6GAL1 POMK chr8 42958973 + ST6GAL1 chr3 186681573 + Exonic hg19 LUSC TCGA-63-A5MV 3 10 Out-of-frame Inter-chr p11.21 q27.3 Seq+ 36884 ChimerSeq STARFusion TCGA_RNA-Seq USP9X-NXF2 USP9X chrX 40945362 + NXF2 chrX 101561988 + Exonic hg19 LUSC TCGA-63-A5MV 3 10 5'UTR-3'UTR Intra-chr p11.4 Oncogene q22.1 Seq+ 36885 ChimerSeq STARFusion TCGA_RNA-Seq USP9X-TCP11X1 USP9X chrX 40945362 + TCP11X1 chrX 101561988 + Exonic hg19 LUSC TCGA-63-A5MV 3 10 Out-of-frame Intra-chr p11.4 Oncogene q22.1 36886 ChimerSeq STARFusion TCGA_RNA-Seq NAALADL2-ABCC5 NAALADL2 chr3 175345174 + ABCC5 chr3 183643507 - Exonic hg19 LUSC TCGA-33-4538 35 94 In-Frame Intra-chr q26.31 q27.1 Seq+ 36887 ChimerSeq STARFusion TCGA_RNA-Seq ADAM23-CERKL ADAM23 chr2 207424842 + CERKL chr2 182482148 - Exonic hg19 LUSC TCGA-33-4538 16 71 CDS-3'UTR Intra-chr q33.3 q31.3 Seq+ 36888 ChimerSeq STARFusion TCGA_RNA-Seq ADAM23-CERKL ADAM23 chr2 207424842 + CERKL chr2 182468806 - Exonic hg19 LUSC TCGA-33-4538 10 71 Out-of-frame Intra-chr q33.3 q31.3 Seq+ 36889 ChimerSeq STARFusion TCGA_RNA-Seq TAF6-IGH@ TAF6 chr7 99711880 - IGH@ chr14 106209412 - Exonic hg19 LUSC TCGA-33-4538 8 1 Out-of-frame Inter-chr q22.1 32.33 36890 ChimerSeq STARFusion TCGA_RNA-Seq TAF6-IGHG1 TAF6 chr7 99711880 - IGHG1 chr14 106209412 - Exonic hg19 LUSC TCGA-33-4538 8 1 Out-of-frame Inter-chr q22.1 q32.33 36891 ChimerSeq STARFusion TCGA_RNA-Seq TAF6-IGH@ TAF6 chr7 99711880 - IGH@ chr14 106237747 - Exonic hg19 LUSC TCGA-33-4538 7 1 Out-of-frame Inter-chr q22.1 32.33 36892 ChimerSeq STARFusion TCGA_RNA-Seq TAF6-IGHG1 TAF6 chr7 99711880 - IGHG1 chr14 106237747 - Exonic hg19 LUSC TCGA-33-4538 7 1 Out-of-frame Inter-chr q22.1 q32.33 36893 ChimerSeq STARFusion TCGA_RNA-Seq TAF6-IGH@ TAF6 chr7 99711880 - IGH@ chr14 106111131 - Exonic hg19 LUSC TCGA-33-4538 6 1 Out-of-frame Inter-chr q22.1 32.33 36894 ChimerSeq STARFusion TCGA_RNA-Seq EHBP1-COMMD1 EHBP1 chr2 62991496 + COMMD1 chr2 62362966 + Exonic hg19 LUSC TCGA-63-A5MR 59 247 In-Frame Intra-chr p15 p15 Seq+ 36895 ChimerSeq STARFusion TCGA_RNA-Seq FHOD3-GALNT1 FHOD3 chr18 33877963 + GALNT1 chr18 33243592 + Exonic hg19 LUSC TCGA-63-A5MR 5 21 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 36896 ChimerSeq STARFusion TCGA_RNA-Seq LYSMD2-SCG3 LYSMD2 chr15 52029547 - SCG3 chr15 52011605 + Exonic hg19 LUSC TCGA-63-A5MR 4 10 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 36897 ChimerSeq STARFusion TCGA_RNA-Seq TMSB10-HAP1 TMSB10 chr2 85133236 + HAP1 chr17 39877732 - Exonic hg19 LUSC TCGA-63-A5MR 3 9 Out-of-frame Inter-chr p11.2 q21.2 36898 ChimerSeq STARFusion TCGA_RNA-Seq GCN1L1-RPLP0 GCN1L1 chr12 120628101 - RPLP0 chr12 120635265 - Exonic hg19 LUSC TCGA-63-A5MP 216 1256 Out-of-frame Intra-chr q24.23 Seq+ 36899 ChimerSeq STARFusion TCGA_RNA-Seq THSD4-WARS THSD4 chr15 71839820 + WARS chr14 100803539 - Exonic hg19 LUSC TCGA-63-A5MP 41 172 Out-of-frame Inter-chr q23 q32.2 Seq+ 36900 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-DDHD2 WHSC1L1 chr8 38178590 - DDHD2 chr8 38095607 + Exonic hg19 LUSC TCGA-63-A5MP 4 47 In-Frame Intra-chr p11.23 Tumor suppressor gene p11.23 Seq+ 36901 ChimerSeq STARFusion TCGA_RNA-Seq STAT1-MLLT10P1 STAT1 chr2 191872289 - MLLT10P1 chr20 29638051 - Exonic hg19 LUSC TCGA-63-A5MP 8 19 CDS-3'UTR Inter-chr q32.2 Tumor suppressor gene Transcription factor q11.21 36902 ChimerSeq STARFusion TCGA_RNA-Seq SMAD4-NRG1 SMAD4 chr18 48556993 + NRG1 chr8 32585467 + Exonic hg19 LUSC TCGA-63-A5MP 7 21 5'UTR-CDS Inter-chr q21.2 Oncogene Tumor suppressor gene Transcription factor p12 Seq+ 36903 ChimerSeq STARFusion TCGA_RNA-Seq LSG1-EIF2B5 LSG1 chr3 194371619 - EIF2B5 chr3 183862672 + Exonic hg19 LUSC TCGA-63-A5MP 4 29 In-Frame Intra-chr q29 q27.1 Seq+ 36904 ChimerSeq STARFusion TCGA_RNA-Seq LSG1-EIF2B5 LSG1 chr3 194371844 - EIF2B5 chr3 183862672 + Exonic hg19 LUSC TCGA-63-A5MP 3 28 In-Frame Intra-chr q29 q27.1 Seq+ 36905 ChimerSeq STARFusion TCGA_RNA-Seq DLGAP1-LRRC23 DLGAP1 chr18 4455006 - LRRC23 chr12 6992868 + Exonic hg19 LUSC TCGA-63-A5MP 3 13 5'UTR-5'UTR Inter-chr p11.31 p13.31 Seq+ 36906 ChimerSeq STARFusion TCGA_RNA-Seq DLGAP1-RPL13P5 DLGAP1 chr18 4455006 - RPL13P5 chr12 6992868 + Exonic hg19 LUSC TCGA-63-A5MP 3 13 5'UTR-5'UTR Inter-chr p11.31 p13.31 Seq+ 36907 ChimerSeq STARFusion TCGA_RNA-Seq C2CD3-DDX11L1 C2CD3 chr11 73872444 - DDX11L1 chr1 12010 + Exonic hg19 LUSC TCGA-63-A5MP 3 8 CDS-3'UTR Inter-chr q13.4 p36.33 36908 ChimerSeq STARFusion TCGA_RNA-Seq DCBLD2-ABI3BP DCBLD2 chr3 98619966 - ABI3BP chr3 100499053 - Exonic hg19 LUSC TCGA-92-7341 13 26 In-Frame Intra-chr q12.1 q12.2 Seq+ 36909 ChimerSeq STARFusion TCGA_RNA-Seq LMTK2-BRI3 LMTK2 chr7 97788737 + BRI3 chr7 97911663 + Exonic hg19 LUSC TCGA-92-7341 4 22 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 36910 ChimerSeq STARFusion TCGA_RNA-Seq BEST1-KRT6A BEST1 chr11 61732576 + KRT6A chr12 52887001 - Exonic hg19 LUSC TCGA-92-7341 3 17 Out-of-frame Inter-chr q12.3 q13.13 36911 ChimerSeq STARFusion TCGA_RNA-Seq LPHN3-BBS9 LPHN3 chr4 62363066 + BBS9 chr7 33644477 + Exonic hg19 LUSC TCGA-92-7341 2 12 In-Frame Inter-chr p14.3 Seq+ 36912 ChimerSeq STARFusion TCGA_RNA-Seq FNBP4-PVRL1 FNBP4 chr11 47786822 - PVRL1 chr11 119548567 - Exonic hg19 LUSC TCGA-96-7544 49 125 In-Frame Intra-chr p11.2 Seq+ 36913 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1432-EPYC KIAA1432 chr9 5690038 + EPYC chr12 91372039 - Exonic hg19 LUSC TCGA-96-7544 14 50 Out-of-frame Inter-chr q21.33 Seq+ 36914 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-COL1A2 IGH@ chr14 106552428 - COL1A2 chr7 94054526 + Exonic hg19 LUSC TCGA-96-7544 6 66 Out-of-frame Inter-chr 32.33 q21.3 36915 ChimerSeq STARFusion TCGA_RNA-Seq SEC61A1-IGHG3 SEC61A1 chr3 127771323 + IGHG3 chr14 106331654 - Exonic hg19 LUSC TCGA-96-7544 16 2 Out-of-frame Inter-chr q21.3 36916 ChimerSeq STARFusion TCGA_RNA-Seq SNRNP200-IGKC SNRNP200 chr2 96948640 - IGKC chr2 89160430 - Exonic hg19 LUSC TCGA-96-7544 11 3 Out-of-frame Intra-chr q11.2 p11.2 36917 ChimerSeq STARFusion TCGA_RNA-Seq CCDC127-SDHA CCDC127 chr5 218208 - SDHA chr5 223597 + Exonic hg19 LUSC TCGA-96-7544 6 13 5'UTR-CDS Intra-chr p15.33 p15.33 Oncogene Tumor suppressor gene Seq+ 36918 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R5D-GLTSCR1L PPP2R5D chr6 42957426 + GLTSCR1L chr6 42819830 + Exonic hg19 LUSC TCGA-96-7544 2 9 Out-of-frame Intra-chr p21.1 Seq+ 36919 ChimerSeq STARFusion TCGA_RNA-Seq TEC-HMGCLL1 TEC chr4 48230494 - HMGCLL1 chr6 55304357 - Exonic hg19 LUSC TCGA-56-A49D 6 11 In-Frame Inter-chr p11 TK:Tec Tumor suppressor gene p12.1 Seq+ 36920 ChimerSeq STARFusion TCGA_RNA-Seq ROCK1-RNF38 ROCK1 chr18 18690779 - RNF38 chr9 36376124 - Exonic hg19 LUSC TCGA-56-A49D 2 12 In-Frame Inter-chr q11.1 AGC:DMPK p13.2 Seq+ 36921 ChimerSeq STARFusion TCGA_RNA-Seq GNE-ROCK1 GNE chr9 36236829 - ROCK1 chr18 18650574 - Exonic hg19 LUSC TCGA-56-A49D 2 6 Out-of-frame Inter-chr p13.3 q11.1 AGC:DMPK Seq+ 36922 ChimerSeq STARFusion TCGA_RNA-Seq RAD51B-GPHN RAD51B chr14 68353921 + GPHN chr14 67626132 + Exonic hg19 LUSC TCGA-43-A474 4 22 In-Frame Intra-chr q24.1 q23.3 Seq+ 36923 ChimerSeq STARFusion TCGA_RNA-Seq MECOM-ARMC8 MECOM chr3 169098975 - ARMC8 chr3 138007890 + Exonic hg19 LUSC TCGA-43-A474 3 7 In-Frame Intra-chr q26.2 Transcription factor q22.3 Seq+ 36924 ChimerSeq STARFusion TCGA_RNA-Seq ARMC8-HMGN2P25 ARMC8 chr3 138003368 + HMGN2P25 chr3 141584231 - Exonic hg19 LUSC TCGA-43-A474 3 5 Out-of-frame Intra-chr q22.3 q23 36925 ChimerSeq STARFusion TCGA_RNA-Seq TAF8-SLC22A16 TAF8 chr6 42023752 + SLC22A16 chr6 110763978 - Exonic hg19 LUSC TCGA-43-A475 151 413 Out-of-frame Intra-chr p21.1 q21 Seq+ 36926 ChimerSeq STARFusion TCGA_RNA-Seq TAF8-SLC22A16 TAF8 chr6 42023772 + SLC22A16 chr6 110763978 - Exonic hg19 LUSC TCGA-43-A475 34 405 Out-of-frame Intra-chr p21.1 q21 Seq+ 36927 ChimerSeq STARFusion TCGA_RNA-Seq METTL24-BYSL METTL24 chr6 110643977 - BYSL chr6 41895112 + Exonic hg19 LUSC TCGA-43-A475 16 76 Out-of-frame Intra-chr q21 p21.1 Seq+ 36928 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-AHDC1 WASF2 chr1 27816497 - AHDC1 chr1 27861427 - Exonic hg19 LUSC TCGA-66-2800 19 128 5'UTR-3'UTR Intra-chr p36.11 p35.3 Transcription factor Seq+ 36929 ChimerSeq STARFusion TCGA_RNA-Seq NUB1-ABCB8 NUB1 chr7 151042552 + ABCB8 chr7 150742296 + Exonic hg19 LUSC TCGA-66-2800 18 100 In-Frame Intra-chr q36.1 q36.1 Seq+ 36930 ChimerSeq STARFusion TCGA_RNA-Seq ARID1B-ENPP4 ARID1B chr6 157406039 + ENPP4 chr6 46107288 + Exonic hg19 LUSC TCGA-66-2800 15 42 CDS-5'UTR Intra-chr q25.3 Oncogene p21.1 Seq+ 36931 ChimerSeq STARFusion TCGA_RNA-Seq C1QL1-SLC16A5 C1QL1 chr17 43044820 - SLC16A5 chr17 73094133 + Exonic hg19 LUSC TCGA-66-2800 2 29 Out-of-frame Intra-chr q21.31 q25.1 Seq+ 36932 ChimerSeq STARFusion TCGA_RNA-Seq DIP2B-LARP4 DIP2B chr12 51054102 + LARP4 chr12 50847243 + Exonic hg19 LUSC TCGA-66-2800 3 18 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 36933 ChimerSeq STARFusion TCGA_RNA-Seq TMEM98-GPATCH8 TMEM98 chr17 31261342 + GPATCH8 chr17 42483419 - Exonic hg19 LUSC TCGA-66-2800 4 12 In-Frame Intra-chr q11.2 q21.31 Seq+ 36934 ChimerSeq STARFusion TCGA_RNA-Seq DIP2B-LARP4 DIP2B chr12 50899023 + LARP4 chr12 50848097 + Exonic hg19 LUSC TCGA-66-2800 2 17 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 36935 ChimerSeq STARFusion TCGA_RNA-Seq EIF5A-MKS1 EIF5A chr17 7213119 + MKS1 chr17 56285944 - Exonic hg19 LUSC TCGA-66-2800 4 8 Out-of-frame Intra-chr p13.1 q22 Seq+ 36936 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-IGH@ TPT1 chr13 45915218 - IGH@ chr14 106209410 - Exonic hg19 LUSC TCGA-66-2800 3 9 Out-of-frame Inter-chr q14.13 32.33 36937 ChimerSeq STARFusion TCGA_RNA-Seq CCAT1-CASC8 CCAT1 chr8 128231055 - CASC8 chr8 128302305 - Exonic hg19 LUSC TCGA-66-2800 2 7 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 36938 ChimerSeq STARFusion TCGA_RNA-Seq IGF2R-SYTL3 IGF2R chr6 160390427 + SYTL3 chr6 159129354 + Exonic hg19 LUSC TCGA-66-2800 2 7 In-Frame Intra-chr q25.3 Oncogene Tumor suppressor gene q25.3 Seq+ 36939 ChimerSeq STARFusion TCGA_RNA-Seq TPD52L1-RNF217 TPD52L1 chr6 125475116 + RNF217 chr6 125397803 + Exonic hg19 LUSC TCGA-77-6845 6 11 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 36940 ChimerSeq STARFusion TCGA_RNA-Seq EEF2K-C10orf35 EEF2K chr16 22218000 + C10orf35 chr10 71391236 + Exonic hg19 LUSC TCGA-77-6845 4 11 5'UTR-5'UTR Inter-chr p12.2 q22.1 Seq+ 36941 ChimerSeq STARFusion TCGA_RNA-Seq CRIPT-GAS5 CRIPT chr2 46846820 + GAS5 chr1 173835705 - Exonic hg19 LUSC TCGA-77-6845 3 12 CDS-3'UTR Inter-chr p21 q25.1 Tumor suppressor gene Seq+ 36942 ChimerSeq STARFusion TCGA_RNA-Seq BAIAP2L1-ANKIB1 BAIAP2L1 chr7 98030114 - ANKIB1 chr7 91924203 + Exonic hg19 LUSC TCGA-56-A4BW 18 16 CDS-5'UTR Intra-chr q22.1 q21.2 Seq+ 36943 ChimerSeq STARFusion TCGA_RNA-Seq AIM1L-IGL@ AIM1L chr1 26663131 - IGL@ chr22 23241798 + Exonic hg19 LUSC TCGA-56-A4BW 8 0 Out-of-frame Inter-chr q11.22 36944 ChimerSeq STARFusion TCGA_RNA-Seq AIM1L-IGLC2 AIM1L chr1 26663131 - IGLC2 chr22 23241798 + Exonic hg19 LUSC TCGA-56-A4BW 8 0 Out-of-frame Inter-chr q11.22 36945 ChimerSeq STARFusion TCGA_RNA-Seq AIM1L-IGLJ2 AIM1L chr1 26663131 - IGLJ2 chr22 23241798 + Exonic hg19 LUSC TCGA-56-A4BW 8 0 Out-of-frame Inter-chr q11.22 36946 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A1-MTUS2 SLC7A1 chr13 30169553 - MTUS2 chr13 30077130 + Exonic hg19 LUSC TCGA-77-6843 5 3 5'UTR-CDS Intra-chr q12.3 q12.3 36947 ChimerSeq STARFusion TCGA_RNA-Seq VDAC3-DKK4 VDAC3 chr8 42252651 + DKK4 chr8 42234690 - Exonic hg19 LUSC TCGA-77-6842 12 489 CDS-5'UTR Intra-chr p11.21 p11.21 Seq+ 36948 ChimerSeq STARFusion TCGA_RNA-Seq VDAC3-DKK4 VDAC3 chr8 42251796 + DKK4 chr8 42234690 - Exonic hg19 LUSC TCGA-77-6842 3 460 CDS-5'UTR Intra-chr p11.21 p11.21 Seq+ 36949 ChimerSeq STARFusion TCGA_RNA-Seq ELMO1-SCIN ELMO1 chr7 37136224 - SCIN chr7 12684209 + Exonic hg19 LUSC TCGA-77-6842 28 164 In-Frame Intra-chr p14.1 p21.3 Seq+ 36950 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-C1orf122 IGH@ chr14 106518400 - C1orf122 chr1 38274838 + Exonic hg19 LUSC TCGA-77-6842 10 1 Out-of-frame Inter-chr 32.33 p34.3 36951 ChimerSeq STARFusion TCGA_RNA-Seq ICAM1-RN7SL2 ICAM1 chr19 10397123 + RN7SL2 chr14 50329500 - Exonic hg19 LUSC TCGA-77-6842 3 28 Out-of-frame Inter-chr p13.2 q21.3 36952 ChimerSeq STARFusion TCGA_RNA-Seq PTMA-SLC25A3 PTMA chr2 232577597 + SLC25A3 chr12 98987627 + Exonic hg19 LUSC TCGA-77-6842 8 1 Out-of-frame Inter-chr q37.1 q23.1 36953 ChimerSeq STARFusion TCGA_RNA-Seq HEATR2-IGH@ HEATR2 chr7 812505 + IGH@ chr14 106321926 - Exonic hg19 LUSC TCGA-77-6842 5 2 Out-of-frame Inter-chr 32.33 36954 ChimerSeq STARFusion TCGA_RNA-Seq YEATS2-ATP11B YEATS2 chr3 183495488 + ATP11B chr3 182590144 + Exonic hg19 LUSC TCGA-56-A4BY 179 1006 In-Frame Intra-chr q27.1 q26.33 Oncogene Seq+ 36955 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-TCAP ERBB2 chr17 37872858 + TCAP chr17 37821969 + Exonic hg19 LUSC TCGA-56-A4BY 14 91 Out-of-frame Intra-chr q12 Oncogene q12 Seq+ 36956 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-TCAP ERBB2 chr17 37872858 + TCAP chr17 37821626 + Exonic hg19 LUSC TCGA-56-A4BY 8 90 Out-of-frame Intra-chr q12 Oncogene q12 Seq+ 36957 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-TCAP ERBB2 chr17 37873451 + TCAP chr17 37821131 + Exonic hg19 LUSC TCGA-56-A4BY 3 90 Out-of-frame Intra-chr q12 Oncogene q12 Seq+ 36958 ChimerSeq STARFusion TCGA_RNA-Seq FBXW7-TMEM154 FBXW7 chr4 153456093 - TMEM154 chr4 153574079 - Exonic hg19 LUSC TCGA-56-A4BY 7 25 5'UTR-CDS Intra-chr q31.3 Oncogene Tumor suppressor gene q31.3 Seq+ 36959 ChimerSeq STARFusion TCGA_RNA-Seq DCUN1D1-ATP11B DCUN1D1 chr3 182658147 - ATP11B chr3 182590144 + Exonic hg19 LUSC TCGA-56-A4BY 4 8 3'UTR-CDS Intra-chr q26.33 Oncogene q26.33 Oncogene 36960 ChimerSeq STARFusion TCGA_RNA-Seq PAK1-LNP1 PAK1 chr11 77184597 - LNP1 chr3 100148541 + Exonic hg19 LUSC TCGA-56-A4BX 17 52 5'UTR-5'UTR Inter-chr q14.1 STE:STE20 q12.2 Seq+ 36961 ChimerSeq STARFusion TCGA_RNA-Seq VPS8-NLGN1 VPS8 chr3 184742177 + NLGN1 chr3 173322069 + Exonic hg19 LUSC TCGA-56-A4BX 7 43 CDS-5'UTR Intra-chr q27.2 q26.31 Seq+ 36962 ChimerSeq STARFusion TCGA_RNA-Seq GTF2F2-GPALPP1 GTF2F2 chr13 45725966 + GPALPP1 chr13 45578440 + Exonic hg19 LUSC TCGA-56-A4BX 6 16 Out-of-frame Intra-chr q14.12 q14.12 Seq+ 36963 ChimerSeq STARFusion TCGA_RNA-Seq ACO2-ZC3H7B ACO2 chr22 41865186 + ZC3H7B chr22 41738533 + Exonic hg19 LUSC TCGA-56-A4BX 3 16 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 36964 ChimerSeq STARFusion TCGA_RNA-Seq PGAP3-GRB7 PGAP3 chr17 37844087 - GRB7 chr17 37898505 + Exonic hg19 LUSC TCGA-56-A4BX 2 18 In-Frame Intra-chr q12 Oncogene q12 Seq+ 36965 ChimerSeq STARFusion TCGA_RNA-Seq ACO2-ZC3H7B ACO2 chr22 41865512 + ZC3H7B chr22 41737092 + Exonic hg19 LUSC TCGA-56-A4BX 2 16 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 36966 ChimerSeq STARFusion TCGA_RNA-Seq ACO2-ZC3H7B ACO2 chr22 41865186 + ZC3H7B chr22 41737092 + Exonic hg19 LUSC TCGA-56-A4BX 2 16 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 36967 ChimerSeq STARFusion TCGA_RNA-Seq YEATS2-GNB4 YEATS2 chr3 183436380 + GNB4 chr3 179144030 - Exonic hg19 LUSC TCGA-56-A4BX 2 11 CDS-5'UTR Intra-chr q27.1 q26.33 Seq+ 36968 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-MRGPRF CTTN chr11 70256066 + MRGPRF chr11 68777425 - Exonic hg19 LUSC TCGA-63-A5M9 11 62 CDS-5'UTR Intra-chr q13.3 q13.3 Seq+ 36969 ChimerSeq STARFusion TCGA_RNA-Seq ITGA2-CEACAM21 ITGA2 chr5 52379283 + CEACAM21 chr19 42083552 + Exonic hg19 LUSC TCGA-63-A5M9 10 36 Out-of-frame Inter-chr q11.2 Seq+ 36970 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-MTL5 PPFIA1 chr11 70208594 + MTL5 chr11 68506256 - Exonic hg19 LUSC TCGA-63-A5M9 7 27 In-Frame Intra-chr q13.3 Seq+ 36971 ChimerSeq STARFusion TCGA_RNA-Seq TPCN2-MRPL21 TPCN2 chr11 68840469 + MRPL21 chr11 68668073 - Exonic hg19 LUSC TCGA-63-A5M9 3 20 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 36972 ChimerSeq STARFusion TCGA_RNA-Seq MED12L-GOLIM4 MED12L chr3 150911453 + GOLIM4 chr3 167742883 - Exonic hg19 LUSC TCGA-63-A5M9 2 12 In-Frame Intra-chr q25.1 q26.2 Seq+ 36973 ChimerSeq STARFusion TCGA_RNA-Seq CPT1A-MRPL21 CPT1A chr11 68549239 - MRPL21 chr11 68668073 - Exonic hg19 LUSC TCGA-63-A5M9 2 6 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 36974 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD33-IGH@ ANKRD33 chr12 52283222 + IGH@ chr14 106330471 - Exonic hg19 LUSC TCGA-96-A4JL 21 0 Out-of-frame Inter-chr q13.13 32.33 36975 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD33-IGHG3 ANKRD33 chr12 52283222 + IGHG3 chr14 106330471 - Exonic hg19 LUSC TCGA-96-A4JL 21 0 Out-of-frame Inter-chr q13.13 36976 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD33-IGHJ4 ANKRD33 chr12 52283222 + IGHJ4 chr14 106330471 - Exonic hg19 LUSC TCGA-96-A4JL 21 0 Out-of-frame Inter-chr q13.13 36977 ChimerSeq STARFusion TCGA_RNA-Seq EPG5-IGHJ1 EPG5 chr18 43431665 - IGHJ1 chr14 106331662 - Exonic hg19 LUSC TCGA-96-A4JL 10 0 Out-of-frame Inter-chr q21.1 Seq+ 36978 ChimerSeq STARFusion TCGA_RNA-Seq EPG5-IGHM EPG5 chr18 43431665 - IGHM chr14 106331662 - Exonic hg19 LUSC TCGA-96-A4JL 10 0 Out-of-frame Inter-chr q21.1 q32.33 36979 ChimerSeq STARFusion TCGA_RNA-Seq GPC1-IGKC GPC1 chr2 241404902 + IGKC chr2 89161071 - Exonic hg19 LUSC TCGA-96-A4JL 6 1 Out-of-frame Intra-chr q37.3 p11.2 36980 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D9B-RNF130 TBC1D9B chr5 179331702 - RNF130 chr5 179347426 - Exonic hg19 LUSC TCGA-96-A4JK 33 143 CDS-3'UTR Intra-chr q35.3 Seq+ 36981 ChimerSeq STARFusion TCGA_RNA-Seq SH3PXD2A-PDLIM1 SH3PXD2A chr10 105561040 - PDLIM1 chr10 97031541 - Exonic hg19 LUSC TCGA-96-A4JK 25 74 In-Frame Intra-chr q24.33 q23.33 Seq+ 36982 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-AP5Z1 IGL@ chr22 22712603 + AP5Z1 chr7 4830389 + Exonic hg19 LUSC TCGA-96-A4JK 10 1 Out-of-frame Inter-chr q11.22 p22.1 36983 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SPTBN2 IGH@ chr14 106539079 - SPTBN2 chr11 66468413 - Exonic hg19 LUSC TCGA-96-A4JK 9 3 Out-of-frame Inter-chr 32.33 q13.2 36984 ChimerSeq STARFusion TCGA_RNA-Seq DPYSL2-BNIP3L DPYSL2 chr8 26441499 + BNIP3L chr8 26362823 + Exonic hg19 LUSC TCGA-96-A4JK 4 14 CDS-3'UTR Intra-chr p21.2 p21.2 Tumor suppressor gene Seq+ 36985 ChimerSeq STARFusion TCGA_RNA-Seq PTPRA-RPL19P1 PTPRA chr20 2903931 + RPL19P1 chr20 2761250 + Exonic hg19 LUSC TCGA-96-A4JK 4 12 Out-of-frame Intra-chr p13 p13 36986 ChimerSeq STARFusion TCGA_RNA-Seq RTN4R-DNAH2 RTN4R chr22 20255594 - DNAH2 chr17 7719889 + Exonic hg19 LUSC TCGA-96-A4JK 5 6 Out-of-frame Inter-chr q11.21 p13.1 Seq+ 36987 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525073 - IGHG1 chr14 106209411 - Exonic hg19 LUSC TCGA-96-A4JK 6 0 Out-of-frame Inter-chr q34 Oncogene q32.33 36988 ChimerSeq STARFusion TCGA_RNA-Seq VARS-HSPA1L VARS chr6 31763323 - HSPA1L chr6 31779762 - Exonic hg19 LUSC TCGA-96-A4JK 2 14 5'UTR-5'UTR Intra-chr Seq+ 36989 ChimerSeq STARFusion TCGA_RNA-Seq ITPR3-IGH@ ITPR3 chr6 33651936 + IGH@ chr14 106330478 - Exonic hg19 LUSC TCGA-96-A4JK 4 4 Out-of-frame Inter-chr p21.31 32.33 36990 ChimerSeq STARFusion TCGA_RNA-Seq ACAP3-DVL1 ACAP3 chr1 1243149 - DVL1 chr1 1278138 - Exonic hg19 LUSC TCGA-96-A4JK 3 7 In-Frame Intra-chr p36.33 p36.33 Seq+ 36991 ChimerSeq STARFusion TCGA_RNA-Seq ITPR3-IGHG3 ITPR3 chr6 33651936 + IGHG3 chr14 106330478 - Exonic hg19 LUSC TCGA-96-A4JK 4 3 Out-of-frame Inter-chr p21.31 36992 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SPTBN2 IGH@ chr14 106641563 - SPTBN2 chr11 66468413 - Exonic hg19 LUSC TCGA-96-A4JK 4 2 Out-of-frame Inter-chr 32.33 q13.2 36993 ChimerSeq STARFusion TCGA_RNA-Seq XPA-CORO2A XPA chr9 100449378 - CORO2A chr9 100919942 - Exonic hg19 LUSC TCGA-96-A4JK 2 5 CDS-5'UTR Intra-chr q22.33 Oncogene Transcription factor q22.33 Seq+ 36994 ChimerSeq STARFusion TCGA_RNA-Seq XPA-CORO2A XPA chr9 100451816 - CORO2A chr9 100919942 - Exonic hg19 LUSC TCGA-96-A4JK 2 5 CDS-5'UTR Intra-chr q22.33 Oncogene Transcription factor q22.33 Seq+ 36995 ChimerSeq STARFusion TCGA_RNA-Seq PLOD3-IGHG3 PLOD3 chr7 100853591 - IGHG3 chr14 106330464 - Exonic hg19 LUSC TCGA-34-2608 37 1 Out-of-frame Inter-chr q22.1 36996 ChimerSeq STARFusion TCGA_RNA-Seq PLOD3-IGHG3 PLOD3 chr7 100853592 - IGHG3 chr14 106330064 - Exonic hg19 LUSC TCGA-34-2608 36 1 Out-of-frame Inter-chr q22.1 36997 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SPARC IGH@ chr14 106774335 - SPARC chr5 151066687 - Exonic hg19 LUSC TCGA-34-2608 3 58 Out-of-frame Inter-chr 32.33 q33.1 Tumor suppressor gene 36998 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525072 - IGHG1 chr14 106209410 - Exonic hg19 LUSC TCGA-34-2608 17 1 Out-of-frame Inter-chr q34 Oncogene q32.33 36999 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 LUSC TCGA-34-2608 11 24 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 37000 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHG1 SLC7A5 chr16 87868137 - IGHG1 chr14 106209410 - Exonic hg19 LUSC TCGA-34-2608 14 4 Out-of-frame Inter-chr q24.2 q32.33 37001 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC18-IGL@ ZDHHC18 chr1 27183953 + IGL@ chr22 23248512 + Exonic hg19 LUSC TCGA-34-2608 13 0 Out-of-frame Inter-chr p36.11 q11.22 37002 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC18-IGLC2 ZDHHC18 chr1 27183953 + IGLC2 chr22 23243156 + Exonic hg19 LUSC TCGA-34-2608 13 0 Out-of-frame Inter-chr p36.11 q11.22 37003 ChimerSeq STARFusion TCGA_RNA-Seq ADCY3-IGL@ ADCY3 chr2 25055023 - IGL@ chr22 23247168 + Exonic hg19 LUSC TCGA-34-2608 9 1 Out-of-frame Inter-chr p23.3 q11.22 37004 ChimerSeq STARFusion TCGA_RNA-Seq ADCY3-IGLC2 ADCY3 chr2 25055021 - IGLC2 chr22 23241800 + Exonic hg19 LUSC TCGA-34-2608 9 1 Out-of-frame Inter-chr p23.3 q11.22 37005 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHG1 SLC7A5 chr16 87868137 - IGHG1 chr14 106237745 - Exonic hg19 LUSC TCGA-34-2608 6 4 Out-of-frame Inter-chr q24.2 q32.33 37006 ChimerSeq STARFusion TCGA_RNA-Seq PSD4-IL1RN PSD4 chr2 113915112 + IL1RN chr2 113868693 + Exonic hg19 LUSC TCGA-34-2600 9 20 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 37007 ChimerSeq STARFusion TCGA_RNA-Seq PSD4-IL1RN PSD4 chr2 113915112 + IL1RN chr2 113870577 + Exonic hg19 LUSC TCGA-34-2600 3 20 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 37008 ChimerSeq STARFusion TCGA_RNA-Seq EIF3L-TRIOBP EIF3L chr22 38274178 + TRIOBP chr22 38147779 + Exonic hg19 LUSC TCGA-43-5668 71 265 In-Frame Intra-chr q13.1 q13.1 Seq+ 37009 ChimerSeq STARFusion TCGA_RNA-Seq EIF3L-NOL12 EIF3L chr22 38274178 + NOL12 chr22 38147779 + Exonic hg19 LUSC TCGA-43-5668 71 262 CDS-3'UTR Intra-chr q13.1 q13.1 37010 ChimerSeq STARFusion TCGA_RNA-Seq TC2N-LPP TC2N chr14 92280047 - LPP chr3 188583988 + Exonic hg19 LUSC TCGA-43-5668 28 132 Out-of-frame Inter-chr q27.3 Oncogene Seq+ 37011 ChimerSeq STARFusion TCGA_RNA-Seq TC2N-LPP TC2N chr14 92302715 - LPP chr3 188583988 + Exonic hg19 LUSC TCGA-43-5668 13 132 5'UTR-CDS Inter-chr q27.3 Oncogene Seq+ 37012 ChimerSeq STARFusion TCGA_RNA-Seq EHD2-RN7SL1 EHD2 chr19 48245649 + RN7SL1 chr14 50053332 + Exonic hg19 LUSC TCGA-43-5668 4 148 Out-of-frame Inter-chr q13.33 q21.3 37013 ChimerSeq STARFusion TCGA_RNA-Seq TC2N-LPP TC2N chr14 92302527 - LPP chr3 188583988 + Exonic hg19 LUSC TCGA-43-5668 6 132 5'UTR-CDS Inter-chr q27.3 Oncogene Seq+ 37014 ChimerSeq STARFusion TCGA_RNA-Seq CDKN2B-IGH@ CDKN2B chr9 22008718 - IGH@ chr14 106330468 - Exonic hg19 LUSC TCGA-43-5668 29 2 Out-of-frame Inter-chr p21.3 Oncogene Tumor suppressor gene 32.33 37015 ChimerSeq STARFusion TCGA_RNA-Seq CDKN2B-IGHM CDKN2B chr9 22008718 - IGHM chr14 106330468 - Exonic hg19 LUSC TCGA-43-5668 28 1 Out-of-frame Inter-chr p21.3 Oncogene Tumor suppressor gene q32.33 37016 ChimerSeq STARFusion TCGA_RNA-Seq MTMR3-RNF215 MTMR3 chr22 30353077 + RNF215 chr22 30776390 - Exonic hg19 LUSC TCGA-43-5668 6 23 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 37017 ChimerSeq STARFusion TCGA_RNA-Seq NDUFS4-EXTL3 NDUFS4 chr5 52899360 + EXTL3 chr8 28595036 + Exonic hg19 LUSC TCGA-43-5668 5 23 Out-of-frame Inter-chr q11.2 p21.1 Tumor suppressor gene Seq+ 37018 ChimerSeq STARFusion TCGA_RNA-Seq MARK3-FBLN5 MARK3 chr14 103871604 + FBLN5 chr14 92361416 - Exonic hg19 LUSC TCGA-43-5668 4 25 Out-of-frame Intra-chr q32.32 CAMK:CAMKL q32.12 Seq+ 37019 ChimerSeq STARFusion TCGA_RNA-Seq CBX6-IGH@ CBX6 chr22 39260185 - IGH@ chr14 106330069 - Exonic hg19 LUSC TCGA-43-5668 7 4 Out-of-frame Inter-chr q13.1 32.33 37020 ChimerSeq STARFusion TCGA_RNA-Seq RNF121-PCDH9 RNF121 chr11 71671937 + PCDH9 chr13 66879160 - Exonic hg19 LUSC TCGA-70-6723 9 44 Out-of-frame Inter-chr q13.4 q21.32 Tumor suppressor gene Seq+ 37021 ChimerSeq STARFusion TCGA_RNA-Seq ACTG1-CCNC ACTG1 chr17 79477712 - CCNC chr6 100016527 - Exonic hg19 LUSC TCGA-70-6723 4 33 Out-of-frame Inter-chr q25.3 q16.2 Tumor suppressor gene Seq+ 37022 ChimerSeq STARFusion TCGA_RNA-Seq TCEA1-EGFR TCEA1 chr8 54934623 - EGFR chr7 55209979 + Exonic hg19 LUSC TCGA-70-6723 2 22 Out-of-frame Inter-chr q11.23 p11.2 TK:EGFR Oncogene Seq+ 37023 ChimerSeq STARFusion TCGA_RNA-Seq ZNF91-KRBOX4 ZNF91 chr19 23541232 - KRBOX4 chrX 46356557 + Exonic hg19 LUSC TCGA-70-6723 4 12 Out-of-frame Inter-chr p12 Transcription factor p11.3 37024 ChimerSeq STARFusion TCGA_RNA-Seq ZNF98-CPAMD8 ZNF98 chr19 22715141 - CPAMD8 chr19 17036182 - Exonic hg19 LUSC TCGA-70-6723 2 14 5'UTR-CDS Intra-chr p12 Transcription factor p13.11 Seq+ 37025 ChimerSeq STARFusion TCGA_RNA-Seq C22orf39-IGHA2 C22orf39 chr22 19344505 - IGHA2 chr14 106054733 - Exonic hg19 LUSC TCGA-70-6722 62 1 Out-of-frame Inter-chr q11.21 37026 ChimerSeq STARFusion TCGA_RNA-Seq HIRA-IGHA2 HIRA chr22 19344505 - IGHA2 chr14 106054733 - Exonic hg19 LUSC TCGA-70-6722 62 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 37027 ChimerSeq STARFusion TCGA_RNA-Seq FAM177A1-AP4S1 FAM177A1 chr14 35515834 + AP4S1 chr14 31549779 + Exonic hg19 LUSC TCGA-70-6722 6 47 In-Frame Intra-chr q13.2 q12 Seq+ 37028 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-IGHG2 DHRSX chrY 2134830 - IGHG2 chr14 106111129 - Exonic hg19 LUSC TCGA-70-6722 17 1 Out-of-frame Inter-chr p22.33 37029 ChimerSeq STARFusion TCGA_RNA-Seq MUC3A-IGL@ MUC3A chr7 100552135 + IGL@ chr22 23241803 + Exonic hg19 LUSC TCGA-70-6722 17 0 Out-of-frame Inter-chr q22.1 q11.22 37030 ChimerSeq STARFusion TCGA_RNA-Seq MUC3A-IGLC2 MUC3A chr7 100552135 + IGLC2 chr22 23241803 + Exonic hg19 LUSC TCGA-70-6722 17 0 Out-of-frame Inter-chr q22.1 q11.22 37031 ChimerSeq STARFusion TCGA_RNA-Seq MUC3A-IGLJ2 MUC3A chr7 100552135 + IGLJ2 chr22 23241803 + Exonic hg19 LUSC TCGA-70-6722 17 0 Out-of-frame Inter-chr q22.1 q11.22 37032 ChimerSeq STARFusion TCGA_RNA-Seq TTLL12-IGH@ TTLL12 chr22 43569724 - IGH@ chr14 106329464 - Exonic hg19 LUSC TCGA-70-6722 11 1 Out-of-frame Inter-chr q13.2 32.33 37033 ChimerSeq STARFusion TCGA_RNA-Seq FAM177A1-AP4S1 FAM177A1 chr14 35516290 + AP4S1 chr14 31549779 + Exonic hg19 LUSC TCGA-70-6722 2 35 Out-of-frame Intra-chr q13.2 q12 Seq+ 37034 ChimerSeq STARFusion TCGA_RNA-Seq OXCT1-FAHD2B OXCT1 chr5 41749629 - FAHD2B chr2 97757449 - Exonic hg19 LUSC TCGA-70-6722 4 9 CDS-5'UTR Inter-chr p13.1 q11.2 37035 ChimerSeq STARFusion TCGA_RNA-Seq TMX3-METTL4 TMX3 chr18 66378601 - METTL4 chr18 2567653 - Exonic hg19 LUSC TCGA-21-1083 24 105 CDS-5'UTR Intra-chr q22.1 p11.32 Seq+ 37036 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076848 + IGH@ chr14 106322329 - Exonic hg19 LUSC TCGA-21-1083 29 0 Out-of-frame Inter-chr q21.2 32.33 37037 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHM GATAD1 chr7 92076848 + IGHM chr14 106322329 - Exonic hg19 LUSC TCGA-21-1083 29 0 Out-of-frame Inter-chr q21.2 q32.33 37038 ChimerSeq STARFusion TCGA_RNA-Seq SMAD2-CD226 SMAD2 chr18 45456732 - CD226 chr18 67563281 - Exonic hg19 LUSC TCGA-21-1083 6 29 5'UTR-CDS Intra-chr q21.1 Oncogene Tumor suppressor gene q22.2 Seq+ 37039 ChimerSeq STARFusion TCGA_RNA-Seq SMAD2-CD226 SMAD2 chr18 45446443 - CD226 chr18 67614669 - Exonic hg19 LUSC TCGA-21-1083 3 29 5'UTR-5'UTR Intra-chr q21.1 Oncogene Tumor suppressor gene q22.2 Seq+ 37040 ChimerSeq STARFusion TCGA_RNA-Seq AAMP-MARCH4 AAMP chr2 219134105 - 2019_ 3_ 4_ chr2 217124402 - Exonic hg19 LUSC TCGA-21-1083 4 22 Out-of-frame Intra-chr q35 q35 Seq+ 37041 ChimerSeq STARFusion TCGA_RNA-Seq ZMIZ2-IGH@ ZMIZ2 chr7 44801493 + IGH@ chr14 106322325 - Exonic hg19 LUSC TCGA-21-1083 9 2 Out-of-frame Inter-chr p13 32.33 37042 ChimerSeq STARFusion TCGA_RNA-Seq SMAD2-CD226 SMAD2 chr18 45457171 - CD226 chr18 67563281 - Exonic hg19 LUSC TCGA-21-1083 2 29 5'UTR-CDS Intra-chr q21.1 Oncogene Tumor suppressor gene q22.2 Seq+ 37043 ChimerSeq STARFusion TCGA_RNA-Seq PHLPP1-WDR12 PHLPP1 chr18 60587347 + WDR12 chr2 203759349 - Exonic hg19 LUSC TCGA-21-1083 4 18 Out-of-frame Inter-chr q21.33 Tumor suppressor gene q33.2 Seq+ 37044 ChimerSeq STARFusion TCGA_RNA-Seq POLDIP3-IGL@ POLDIP3 chr22 43010934 - IGL@ chr22 23241799 + Exonic hg19 LUSC TCGA-21-1082 81 1 Out-of-frame Intra-chr q13.2 q11.22 37045 ChimerSeq STARFusion TCGA_RNA-Seq POLDIP3-IGLC2 POLDIP3 chr22 43010934 - IGLC2 chr22 23241799 + Exonic hg19 LUSC TCGA-21-1082 80 1 Out-of-frame Intra-chr q13.2 q11.22 37046 ChimerSeq STARFusion TCGA_RNA-Seq FAM193A-TNIP2 FAM193A chr4 2702271 + TNIP2 chr4 2749672 - Exonic hg19 LUSC TCGA-21-1082 14 68 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 37047 ChimerSeq STARFusion TCGA_RNA-Seq TRIM28-ZBTB45 TRIM28 chr19 59056464 + ZBTB45 chr19 59029040 - Exonic hg19 LUSC TCGA-21-1082 10 45 CDS-5'UTR Intra-chr q13.43 q13.43 Transcription factor Seq+ 37048 ChimerSeq STARFusion TCGA_RNA-Seq ATP1B3-RNF7 ATP1B3 chr3 141595752 + RNF7 chr3 141464001 + Exonic hg19 LUSC TCGA-21-1082 9 28 In-Frame Intra-chr q23 q23 Seq+ 37049 ChimerSeq STARFusion TCGA_RNA-Seq TRIM28-ZBTB45 TRIM28 chr19 59057263 + ZBTB45 chr19 59031434 - Exonic hg19 LUSC TCGA-21-1082 3 44 CDS-5'UTR Intra-chr q13.43 q13.43 Transcription factor Seq+ 37050 ChimerSeq STARFusion TCGA_RNA-Seq CTSB-DEFB136 CTSB chr8 11706555 - DEFB136 chr8 11831627 - Exonic hg19 LUSC TCGA-21-1082 4 33 Out-of-frame Intra-chr p23.1 p23.1 Seq+ 37051 ChimerSeq STARFusion TCGA_RNA-Seq GPBP1L1-IGHG3 GPBP1L1 chr1 46099862 - IGHG3 chr14 106330472 - Exonic hg19 LUSC TCGA-21-1082 11 0 Out-of-frame Inter-chr p34.1 Transcription factor 37052 ChimerSeq STARFusion TCGA_RNA-Seq GPBP1L1-IGHJ4 GPBP1L1 chr1 46099862 - IGHJ4 chr14 106330472 - Exonic hg19 LUSC TCGA-21-1082 11 0 Out-of-frame Inter-chr p34.1 Transcription factor 37053 ChimerSeq STARFusion TCGA_RNA-Seq ACVR2A-CASP8 ACVR2A chr2 148674995 + CASP8 chr2 202131184 + Exonic hg19 LUSC TCGA-21-1082 3 25 Out-of-frame Intra-chr q22.3 Oncogene q33.1 Oncogene Tumor suppressor gene Seq+ 37054 ChimerSeq STARFusion TCGA_RNA-Seq ACVR2A-CASP8 ACVR2A chr2 148674995 + CASP8 chr2 202131210 + Exonic hg19 LUSC TCGA-21-1082 2 25 CDS-5'UTR Intra-chr q22.3 Oncogene q33.1 Oncogene Tumor suppressor gene Seq+ 37055 ChimerSeq STARFusion TCGA_RNA-Seq ATP11A-CUL4A ATP11A chr13 113344769 + CUL4A chr13 113907396 + Exonic hg19 LUSC TCGA-21-1081 144 165 In-Frame Intra-chr q34 q34 Seq+ 37056 ChimerSeq STARFusion TCGA_RNA-Seq C19orf48-ACPT C19orf48 chr19 51301326 - ACPT chr19 51297145 + Exonic hg19 LUSC TCGA-21-1081 22 97 3'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 37057 ChimerSeq STARFusion TCGA_RNA-Seq C19orf48-ACPT C19orf48 chr19 51301554 - ACPT chr19 51297145 + Exonic hg19 LUSC TCGA-21-1081 6 93 In-Frame Intra-chr q13.33 q13.33 Seq+ 37058 ChimerSeq STARFusion TCGA_RNA-Seq C19orf48-ACPT C19orf48 chr19 51301156 - ACPT chr19 51297145 + Exonic hg19 LUSC TCGA-21-1081 6 93 3'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 37059 ChimerSeq STARFusion TCGA_RNA-Seq C19orf48-ACPT C19orf48 chr19 51302551 - ACPT chr19 51297145 + Exonic hg19 LUSC TCGA-21-1081 6 93 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 37060 ChimerSeq STARFusion TCGA_RNA-Seq CAPN15-WHSC1L1 CAPN15 chr16 583998 + WHSC1L1 chr8 38205733 - Exonic hg19 LUSC TCGA-21-1081 18 20 Out-of-frame Inter-chr p13.3 p11.23 Tumor suppressor gene 37061 ChimerSeq STARFusion TCGA_RNA-Seq SLC22A23-TRAF3 SLC22A23 chr6 3410422 - TRAF3 chr14 103336522 + Exonic hg19 LUSC TCGA-21-1081 12 39 CDS-5'UTR Inter-chr p25.2 q32.32 Seq+ 37062 ChimerSeq STARFusion TCGA_RNA-Seq PI4KA-RREB1 PI4KA chr22 21188850 - RREB1 chr6 7211037 + Exonic hg19 LUSC TCGA-21-1081 12 36 Out-of-frame Inter-chr q11.21 p24.3 Transcription factor Seq+ 37063 ChimerSeq STARFusion TCGA_RNA-Seq TUBA1C-EML2 TUBA1C chr12 49667053 + EML2 chr19 46112882 - Exonic hg19 LUSC TCGA-21-1081 14 0 Out-of-frame Inter-chr q13.12 q13.32 37064 ChimerSeq STARFusion TCGA_RNA-Seq KDELC2-CDKN2A KDELC2 chr11 108350113 - CDKN2A chr9 21994949 - Exonic hg19 LUSC TCGA-21-1081 4 25 Out-of-frame Inter-chr q22.3 p21.3 Oncogene Tumor suppressor gene 37065 ChimerSeq STARFusion TCGA_RNA-Seq PDGFC-RPL37 PDGFC chr4 157700244 - RPL37 chr5 40835311 - Exonic hg19 LUSC TCGA-21-1081 4 21 Out-of-frame Inter-chr q32.1 p13.1 37066 ChimerSeq STARFusion TCGA_RNA-Seq FAM117B-BMPR2 FAM117B chr2 203560755 + BMPR2 chr2 203417439 + Exonic hg19 LUSC TCGA-21-1081 2 20 CDS-3'UTR Intra-chr q33.2 q33.1 TKL:STKR Tumor suppressor gene 37067 ChimerSeq STARFusion TCGA_RNA-Seq RNF19A-PRSS3 RNF19A chr8 101322095 - PRSS3 chr9 33796641 + Exonic hg19 LUSC TCGA-21-1080 100 233 5'UTR-CDS Inter-chr q22.2 p13.3 Seq+ 37068 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC2-SLC26A5 DNAJC2 chr7 102978183 - SLC26A5 chr7 103029561 - Exonic hg19 LUSC TCGA-21-1080 25 73 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 37069 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC2-SLC26A5 DNAJC2 chr7 102978183 - SLC26A5 chr7 103029871 - Exonic hg19 LUSC TCGA-21-1080 8 69 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 37070 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHGP STK25 chr2 242434915 - IGHGP chr14 106136184 - Exonic hg19 LUSC TCGA-21-1080 8 1 Out-of-frame Inter-chr q37.3 37071 ChimerSeq STARFusion TCGA_RNA-Seq NF1-AGTR1 NF1 chr17 29662049 + AGTR1 chr3 148425731 + Exonic hg19 LUSC TCGA-92-8063 6 9 CDS-5'UTR Inter-chr q11.2 Oncogene Tumor suppressor gene q24 Tumor suppressor gene Seq+ 37072 ChimerSeq STARFusion TCGA_RNA-Seq CHD4-IGH@ CHD4 chr12 6692428 - IGH@ chr14 106330466 - Exonic hg19 LUSC TCGA-92-8064 18 4 Out-of-frame Inter-chr p13.31 32.33 37073 ChimerSeq STARFusion TCGA_RNA-Seq CHD4-IGHG3 CHD4 chr12 6692428 - IGHG3 chr14 106330466 - Exonic hg19 LUSC TCGA-92-8064 18 1 Out-of-frame Inter-chr p13.31 37074 ChimerSeq STARFusion TCGA_RNA-Seq ARL5B-NSUN6 ARL5B chr10 18957606 + NSUN6 chr10 18840900 - Exonic hg19 LUSC TCGA-92-8064 3 26 Out-of-frame Intra-chr p12.31 p12.31 Seq+ 37075 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-NOTCH1 IGH@ chr14 106134591 - NOTCH1 chr9 139403429 - Exonic hg19 LUSC TCGA-92-8064 7 1 Out-of-frame Inter-chr 32.33 q34.3 Oncogene Tumor suppressor gene 37076 ChimerSeq STARFusion TCGA_RNA-Seq VPS37B-IGHG3 VPS37B chr12 123356014 - IGHG3 chr14 106330058 - Exonic hg19 LUSC TCGA-92-8064 7 0 Out-of-frame Inter-chr q24.31 37077 ChimerSeq STARFusion TCGA_RNA-Seq VPS37B-IGHJ5 VPS37B chr12 123356014 - IGHJ5 chr14 106330058 - Exonic hg19 LUSC TCGA-92-8064 7 0 Out-of-frame Inter-chr q24.31 37078 ChimerSeq STARFusion TCGA_RNA-Seq NRBP1-IGHG1 NRBP1 chr2 27664675 + IGHG1 chr14 106209409 - Exonic hg19 LUSC TCGA-92-8064 6 1 Out-of-frame Inter-chr p23.3 Other:NRBP Tumor suppressor gene q32.33 37079 ChimerSeq STARFusion TCGA_RNA-Seq CHD4-IGH@ CHD4 chr12 6692425 - IGH@ chr14 106330062 - Exonic hg19 LUSC TCGA-92-8064 5 3 Out-of-frame Inter-chr p13.31 32.33 37080 ChimerSeq STARFusion TCGA_RNA-Seq CHD4-IGHG3 CHD4 chr12 6692425 - IGHG3 chr14 106330062 - Exonic hg19 LUSC TCGA-92-8064 5 1 Out-of-frame Inter-chr p13.31 37081 ChimerSeq STARFusion TCGA_RNA-Seq GABARAP-IGHG3 GABARAP chr17 7144193 - IGHG3 chr14 106330059 - Exonic hg19 LUSC TCGA-92-8064 4 1 Out-of-frame Inter-chr p13.1 Tumor suppressor gene 37082 ChimerSeq STARFusion TCGA_RNA-Seq TJP1-IGL@ TJP1 chr15 29997755 - IGL@ chr22 23247171 + Exonic hg19 LUSC TCGA-92-8064 4 1 Out-of-frame Inter-chr q11.22 37083 ChimerSeq STARFusion TCGA_RNA-Seq DIP2B-IGKC DIP2B chr12 51084878 + IGKC chr2 89161073 - Exonic hg19 LUSC TCGA-92-8064 3 2 Out-of-frame Inter-chr q13.12 p11.2 37084 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHG1 SLC7A5 chr16 87868137 - IGHG1 chr14 106209410 - Exonic hg19 LUSC TCGA-92-8064 3 2 Out-of-frame Inter-chr q24.2 q32.33 37085 ChimerSeq STARFusion TCGA_RNA-Seq CSTA-CASR CSTA chr3 122056495 + CASR chr3 121994659 + Exonic hg19 LUSC TCGA-92-8065 47 182 In-Frame Intra-chr q21.1 q13.33 Seq+ 37086 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-S100A9 IGH@ chr14 106208230 - S100A9 chr1 153333303 + Exonic hg19 LUSC TCGA-92-8065 8 202 Out-of-frame Inter-chr 32.33 q21.3 37087 ChimerSeq STARFusion TCGA_RNA-Seq LTBP3-TSPAN32 LTBP3 chr11 65306430 - TSPAN32 chr11 2338629 + Exonic hg19 LUSC TCGA-92-8065 22 70 Out-of-frame Intra-chr q13.1 p15.5 Tumor suppressor gene Seq+ 37088 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-S100A9 IGHG1 chr14 106208230 - S100A9 chr1 153333303 + Exonic hg19 LUSC TCGA-92-8065 8 101 Out-of-frame Inter-chr q32.33 q21.3 37089 ChimerSeq STARFusion TCGA_RNA-Seq PGLYRP4-S100A2 PGLYRP4 chr1 153309657 - S100A2 chr1 153536363 - Exonic hg19 LUSC TCGA-92-8065 12 85 CDS-5'UTR Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 37090 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 LUSC TCGA-92-8065 10 44 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 37091 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1746245 + Exonic hg19 LUSC TCGA-92-8065 2 44 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 37092 ChimerSeq STARFusion TCGA_RNA-Seq RXRA-IGHG2 RXRA chr9 137326058 + IGHG2 chr14 106111065 - Exonic hg19 LUSC TCGA-92-8065 11 1 Out-of-frame Inter-chr q34.2 Transcription factor 37093 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB2-IGKC DNAJB2 chr2 220151425 + IGKC chr2 89156807 - Exonic hg19 LUSC TCGA-92-8065 9 1 Out-of-frame Intra-chr q35 p11.2 37094 ChimerSeq STARFusion TCGA_RNA-Seq SLC1A3-MAPKAP1 SLC1A3 chr5 36608706 + MAPKAP1 chr9 128420078 - Exonic hg19 LUSC TCGA-92-8065 3 6 In-Frame Inter-chr p13.2 q33.3 Seq+ 37095 ChimerSeq STARFusion TCGA_RNA-Seq SIK2-CARD17 SIK2 chr11 111491126 + CARD17 chr11 104970148 - Exonic hg19 LUSC TCGA-94-7557 30 75 In-Frame Intra-chr q23.1 q22.3 Seq+ 37096 ChimerSeq STARFusion TCGA_RNA-Seq WWP2-TANGO6 WWP2 chr16 69922152 + TANGO6 chr16 68936231 + Exonic hg19 LUSC TCGA-94-7557 11 53 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 37097 ChimerSeq STARFusion TCGA_RNA-Seq WWP2-TANGO6 WWP2 chr16 69922152 + TANGO6 chr16 68941346 + Exonic hg19 LUSC TCGA-94-7557 6 53 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 37098 ChimerSeq STARFusion TCGA_RNA-Seq WWP2-TANGO6 WWP2 chr16 69985026 + TANGO6 chr16 68936230 + Exonic hg19 LUSC TCGA-94-7557 3 53 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 37099 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-CDH3 NFAT5 chr16 69704191 + CDH3 chr16 68732094 + Exonic hg19 LUSC TCGA-94-7557 7 28 In-Frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 37100 ChimerSeq STARFusion TCGA_RNA-Seq MARK2-BUB1B MARK2 chr11 63607032 + BUB1B chr15 40468678 + Exonic hg19 LUSC TCGA-94-7557 8 21 In-Frame Inter-chr q13.1 CAMK:CAMKL q15.1 Oncogene Seq+ 37101 ChimerSeq STARFusion TCGA_RNA-Seq PTEN-EMX2 PTEN chr10 89653866 + EMX2 chr10 119305143 + Exonic hg19 LUSC TCGA-94-7557 7 21 Out-of-frame Intra-chr q23.31 Oncogene Tumor suppressor gene q26.11 Transcription factor Seq+ 37102 ChimerSeq STARFusion TCGA_RNA-Seq MARK2-BUB1B MARK2 chr11 63607032 + BUB1B chr15 40468584 + Exonic hg19 LUSC TCGA-94-7557 4 21 Out-of-frame Inter-chr q13.1 CAMK:CAMKL q15.1 Oncogene Seq+ 37103 ChimerSeq STARFusion TCGA_RNA-Seq PTEN-EMX2 PTEN chr10 89653866 + EMX2 chr10 119307576 + Exonic hg19 LUSC TCGA-94-7557 2 21 Out-of-frame Intra-chr q23.31 Oncogene Tumor suppressor gene q26.11 Transcription factor Seq+ 37104 ChimerSeq STARFusion TCGA_RNA-Seq STIP1-PAK1 STIP1 chr11 63953742 + PAK1 chr11 77043912 - Exonic hg19 LUSC TCGA-94-7557 4 5 In-Frame Intra-chr q13.1 q14.1 STE:STE20 Seq+ 37105 ChimerSeq STARFusion TCGA_RNA-Seq C10orf118-EMX2OS C10orf118 chr10 115917313 - EMX2OS chr10 119251620 - Exonic hg19 LUSC TCGA-94-7557 2 10 CDS-3'UTR Intra-chr q26.11 37106 ChimerSeq STARFusion TCGA_RNA-Seq MCCC1-FXR1 MCCC1 chr3 182788787 - FXR1 chr3 180679256 + Exonic hg19 LUSC TCGA-56-7223 32 55 Out-of-frame Intra-chr q27.1 q26.33 Seq+ 37107 ChimerSeq STARFusion TCGA_RNA-Seq HOMER1-DMGDH HOMER1 chr5 78734833 - DMGDH chr5 78359610 - Exonic hg19 LUSC TCGA-56-7223 13 64 In-Frame Intra-chr q14.1 q14.1 Seq+ 37108 ChimerSeq STARFusion TCGA_RNA-Seq KLHL24-MCF2L2 KLHL24 chr3 183353581 + MCF2L2 chr3 182948805 - Exonic hg19 LUSC TCGA-56-7223 2 89 5'UTR-CDS Intra-chr q27.1 q27.1 Seq+ 37109 ChimerSeq STARFusion TCGA_RNA-Seq HOMER1-DMGDH HOMER1 chr5 78734833 - DMGDH chr5 78329231 - Exonic hg19 LUSC TCGA-56-7223 7 63 In-Frame Intra-chr q14.1 q14.1 Seq+ 37110 ChimerSeq STARFusion TCGA_RNA-Seq LINC00969-MFN1 LINC00969 chr3 195416309 + MFN1 chr3 179085227 + Exonic hg19 LUSC TCGA-56-7223 7 50 Out-of-frame Intra-chr q26.33 37111 ChimerSeq STARFusion TCGA_RNA-Seq KIRREL-PYHIN1 KIRREL chr1 158063552 + PYHIN1 chr1 158911767 + Exonic hg19 LUSC TCGA-56-7223 11 20 In-Frame Intra-chr q23.1 q23.1 Tumor suppressor gene Seq+ 37112 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R2-CLDN1 PPP1R2 chr3 195256595 - CLDN1 chr3 190030825 - Exonic hg19 LUSC TCGA-56-7223 7 8 Out-of-frame Intra-chr q29 q28 Tumor suppressor gene Seq+ 37113 ChimerSeq STARFusion TCGA_RNA-Seq CSMD1-C15orf41 CSMD1 chr8 4851854 - C15orf41 chr15 37100525 + Exonic hg19 LUSC TCGA-63-5131 27 80 Out-of-frame Inter-chr p23.2 Tumor suppressor gene q14 Seq+ 37114 ChimerSeq STARFusion TCGA_RNA-Seq SPSB1-RANBP1 SPSB1 chr1 9428255 + RANBP1 chr22 20114679 + Exonic hg19 LUSC TCGA-63-5131 7 26 Out-of-frame Inter-chr p36.22 q11.21 Seq+ 37115 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-LINC00501 TBL1XR1 chr3 176755886 - LINC00501 chr3 177039217 + Exonic hg19 LUSC TCGA-63-5131 7 13 Out-of-frame Intra-chr q26.32 q26.32 37116 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2C-FMO1 PRRC2C chr1 171454874 + FMO1 chr1 171236682 + Exonic hg19 LUSC TCGA-96-8169 39 88 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 37117 ChimerSeq STARFusion TCGA_RNA-Seq NADSYN1-MYEOV NADSYN1 chr11 71175188 + MYEOV chr11 69156278 + Exonic hg19 LUSC TCGA-96-8169 6 52 CDS-3'UTR Intra-chr q13.4 q13.3 Seq+ 37118 ChimerSeq STARFusion TCGA_RNA-Seq PIAS1-IGL@ PIAS1 chr15 68466095 + IGL@ chr22 23247169 + Exonic hg19 LUSC TCGA-XC-AA0X 10 0 Out-of-frame Inter-chr q23 Tumor suppressor gene q11.22 37119 ChimerSeq STARFusion TCGA_RNA-Seq PIAS1-IGLC3 PIAS1 chr15 68466095 + IGLC3 chr22 23247169 + Exonic hg19 LUSC TCGA-XC-AA0X 10 0 Out-of-frame Inter-chr q23 Tumor suppressor gene q11.22 37120 ChimerSeq STARFusion TCGA_RNA-Seq PIAS1-IGLJ3 PIAS1 chr15 68466095 + IGLJ3 chr22 23247169 + Exonic hg19 LUSC TCGA-XC-AA0X 10 0 Out-of-frame Inter-chr q23 Tumor suppressor gene q11.22 37121 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38075947 + MIPOL1 chr14 37838722 + Exonic hg19 LUSC TCGA-XC-AA0X 3 5 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 37122 ChimerSeq STARFusion TCGA_RNA-Seq ZNF850-WTIP ZNF850 chr19 37253207 - WTIP chr19 34981281 + Exonic hg19 LUSC TCGA-XC-AA0X 2 7 In-Frame Intra-chr q13.12 Transcription factor q13.11 Seq+ 37123 ChimerSeq STARFusion TCGA_RNA-Seq UBA6-TMPRSS11D UBA6 chr4 68494789 - TMPRSS11D chr4 68725396 - Exonic hg19 LUSC TCGA-XC-AA0X 2 5 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 37124 ChimerSeq STARFusion TCGA_RNA-Seq MDGA2-IGKC MDGA2 chr14 47528462 - IGKC chr2 89161433 - Exonic hg19 LUSC TCGA-90-A4ED 31 1 Out-of-frame Inter-chr q21.3 p11.2 37125 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525072 - IGHG1 chr14 106209410 - Exonic hg19 LUSC TCGA-90-A4ED 30 1 Out-of-frame Inter-chr q34 Oncogene q32.33 37126 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525072 - IGHG1 chr14 106237745 - Exonic hg19 LUSC TCGA-90-A4ED 25 1 Out-of-frame Inter-chr q34 Oncogene q32.33 37127 ChimerSeq STARFusion TCGA_RNA-Seq ZNF609-TRIP4 ZNF609 chr15 64791786 + TRIP4 chr15 64717739 + Exonic hg19 LUSC TCGA-90-A4ED 11 53 Out-of-frame Intra-chr q22.31 Transcription factor q22.31 37128 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB2-IGKC DNAJB2 chr2 220151425 + IGKC chr2 89156807 - Exonic hg19 LUSC TCGA-90-A4ED 10 1 Out-of-frame Intra-chr q35 p11.2 37129 ChimerSeq STARFusion TCGA_RNA-Seq CLDN1-IGL@ CLDN1 chr3 190039876 - IGL@ chr22 23247172 + Exonic hg19 LUSC TCGA-90-A4EE 9 0 Out-of-frame Inter-chr q28 Tumor suppressor gene q11.22 37130 ChimerSeq STARFusion TCGA_RNA-Seq CLDN1-IGLC3 CLDN1 chr3 190039876 - IGLC3 chr22 23247172 + Exonic hg19 LUSC TCGA-90-A4EE 9 0 Out-of-frame Inter-chr q28 Tumor suppressor gene q11.22 37131 ChimerSeq STARFusion TCGA_RNA-Seq CLDN1-IGLJ2 CLDN1 chr3 190039873 - IGLJ2 chr22 23241805 + Exonic hg19 LUSC TCGA-90-A4EE 9 0 Out-of-frame Inter-chr q28 Tumor suppressor gene q11.22 37132 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-DIP2A IGH@ chr14 107169932 - DIP2A chr21 47969816 + Exonic hg19 LUSC TCGA-90-A4EE 7 1 Out-of-frame Inter-chr 32.33 q22.3 37133 ChimerSeq STARFusion TCGA_RNA-Seq MARK3-EIF5 MARK3 chr14 103871604 + EIF5 chr14 103801990 + Exonic hg19 LUSC TCGA-85-A53L 10 71 CDS-5'UTR Intra-chr q32.32 CAMK:CAMKL q32.32 Seq+ 37134 ChimerSeq STARFusion TCGA_RNA-Seq ELL-LDLRAD1 ELL chr19 18572388 - LDLRAD1 chr1 54476083 - Exonic hg19 LUSC TCGA-85-A53L 4 42 Out-of-frame Inter-chr p13.11 p32.3 Seq+ 37135 ChimerSeq STARFusion TCGA_RNA-Seq RBM6-IDH2 RBM6 chr3 49977658 + IDH2 chr15 90634876 - Exonic hg19 LUSC TCGA-85-A53L 6 22 5'UTR-CDS Inter-chr p21.31 Tumor suppressor gene q26.1 Oncogene Seq+ 37136 ChimerSeq STARFusion TCGA_RNA-Seq RBM6-IDH2 RBM6 chr3 49977658 + IDH2 chr15 90631979 - Exonic hg19 LUSC TCGA-85-A53L 3 22 5'UTR-CDS Inter-chr p21.31 Tumor suppressor gene q26.1 Oncogene Seq+ 37137 ChimerSeq STARFusion TCGA_RNA-Seq GPHN-DCAF5 GPHN chr14 67147903 + DCAF5 chr14 69558604 - Exonic hg19 LUSC TCGA-85-A53L 4 9 In-Frame Intra-chr q23.3 q24.1 Seq+ 37138 ChimerSeq STARFusion TCGA_RNA-Seq TSR2-FGD1 TSR2 chrX 54470498 + FGD1 chrX 54472251 - Exonic hg19 LUSC TCGA-85-A53L 4 5 Out-of-frame Intra-chr p11.22 p11.22 37139 ChimerSeq STARFusion TCGA_RNA-Seq DHX30-RPLP1 DHX30 chr3 47884745 + RPLP1 chr15 69745170 + Exonic hg19 LUSC TCGA-85-8354 30 76 CDS-5'UTR Inter-chr p21.31 q23 Seq+ 37140 ChimerSeq STARFusion TCGA_RNA-Seq RALA-C7orf10 RALA chr7 39663424 + C7orf10 chr7 40789033 + Exonic hg19 LUSC TCGA-85-8354 3 55 5'UTR-CDS Intra-chr p14.1 Seq+ 37141 ChimerSeq STARFusion TCGA_RNA-Seq KCNQ5-AMPH KCNQ5 chr6 73815090 + AMPH chr7 38433814 - Exonic hg19 LUSC TCGA-85-8354 7 37 In-Frame Inter-chr q13 p14.1 Seq+ 37142 ChimerSeq STARFusion TCGA_RNA-Seq GRIP1-XCL1 GRIP1 chr12 66932858 - XCL1 chr1 168550290 + Exonic hg19 LUSC TCGA-85-8354 8 16 Out-of-frame Inter-chr q14.3 q24.2 Seq+ 37143 ChimerSeq STARFusion TCGA_RNA-Seq EXT2-PRMT10 EXT2 chr11 44151688 + PRMT10 chr4 148601622 - Exonic hg19 LUSC TCGA-85-8354 6 17 In-Frame Inter-chr p11.2 Oncogene Tumor suppressor gene Seq+ 37144 ChimerSeq STARFusion TCGA_RNA-Seq RNF213-IGL@ RNF213 chr17 78353319 + IGL@ chr22 23247175 + Exonic hg19 LUSC TCGA-33-A4WN 34 1 Out-of-frame Inter-chr q25.3 Oncogene q11.22 37145 ChimerSeq STARFusion TCGA_RNA-Seq RNF213-IGL@ RNF213 chr17 78353317 + IGL@ chr22 23235966 + Exonic hg19 LUSC TCGA-33-A4WN 28 1 Out-of-frame Inter-chr q25.3 Oncogene q11.22 37146 ChimerSeq STARFusion TCGA_RNA-Seq RNF213-IGLL5 RNF213 chr17 78353317 + IGLL5 chr22 23235966 + Exonic hg19 LUSC TCGA-33-A4WN 28 1 Out-of-frame Inter-chr q25.3 Oncogene q11.22 37147 ChimerSeq STARFusion TCGA_RNA-Seq NRBP1-IGHG1 NRBP1 chr2 27664677 + IGHG1 chr14 106209407 - Exonic hg19 LUSC TCGA-33-A4WN 21 1 Out-of-frame Inter-chr p23.3 Other:NRBP Tumor suppressor gene q32.33 37148 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-IGH@ TPT1 chr13 45915219 - IGH@ chr14 106209411 - Exonic hg19 LUSC TCGA-33-A4WN 18 6 Out-of-frame Inter-chr q14.13 32.33 37149 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-IGHG1 TPT1 chr13 45915219 - IGHG1 chr14 106209411 - Exonic hg19 LUSC TCGA-33-A4WN 18 2 Out-of-frame Inter-chr q14.13 q32.33 37150 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-IGH@ TPT1 chr13 45915219 - IGH@ chr14 106136185 - Exonic hg19 LUSC TCGA-33-A4WN 13 6 Out-of-frame Inter-chr q14.13 32.33 37151 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106209410 - Exonic hg19 LUSC TCGA-33-A4WN 8 4 Out-of-frame Inter-chr q24.2 32.33 37152 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHG1 SLC7A5 chr16 87868137 - IGHG1 chr14 106209410 - Exonic hg19 LUSC TCGA-33-A4WN 8 1 Out-of-frame Inter-chr q24.2 q32.33 37153 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-MBD2 IGH@ chr14 107160072 - MBD2 chr18 51686219 - Exonic hg19 LUSC TCGA-33-A4WN 7 1 Out-of-frame Inter-chr 32.33 q21.2 Transcription factor 37154 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106237745 - Exonic hg19 LUSC TCGA-33-A4WN 6 3 Out-of-frame Inter-chr q24.2 32.33 37155 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2-CWH43 NOTCH2 chr1 120506197 - CWH43 chr4 49032842 + Exonic hg19 LUSC TCGA-33-A4WN 4 9 In-Frame Inter-chr p12 Oncogene Tumor suppressor gene p11 Seq+ 37156 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-IGH@ TPT1 chr13 45915219 - IGH@ chr14 106237746 - Exonic hg19 LUSC TCGA-33-A4WN 3 6 Out-of-frame Inter-chr q14.13 32.33 37157 ChimerSeq STARFusion TCGA_RNA-Seq XRN2-TMEM40 XRN2 chr20 21335510 + TMEM40 chr3 12791339 - Exonic hg19 LUSC TCGA-52-7810 17 39 CDS-5'UTR Inter-chr p11.22 p25.2 Seq+ 37158 ChimerSeq STARFusion TCGA_RNA-Seq DPF2-CDC42EP2 DPF2 chr11 65101389 + CDC42EP2 chr11 65088015 + Exonic hg19 LUSC TCGA-52-7810 10 14 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 37159 ChimerSeq STARFusion TCGA_RNA-Seq DCAF15-C19orf57 DCAF15 chr19 14063456 + C19orf57 chr19 14006359 - Exonic hg19 LUSC TCGA-52-7810 7 6 Out-of-frame Intra-chr p13.12 p13.12 Seq+ 37160 ChimerSeq STARFusion TCGA_RNA-Seq SENP6-PPIL6 SENP6 chr6 76407233 + PPIL6 chr6 109752548 - Exonic hg19 LUSC TCGA-52-7810 4 11 Out-of-frame Intra-chr q14.1 q21 Seq+ 37161 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHG4B-AHRR PLEKHG4B chr5 151714 + AHRR chr5 344008 + Exonic hg19 LUSC TCGA-52-7810 4 7 Out-of-frame Intra-chr p15.33 p15.33 Tumor suppressor gene Transcription factor Seq+ 37162 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHG4B-PDCD6 PLEKHG4B chr5 151714 + PDCD6 chr5 344008 + Exonic hg19 LUSC TCGA-52-7810 4 7 CDS-3'UTR Intra-chr p15.33 p15.33 Seq+ 37163 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R3A-SPSB4 PPP2R3A chr3 135822218 + SPSB4 chr3 140865984 + Exonic hg19 LUSC TCGA-52-7810 2 12 Out-of-frame Intra-chr q22.2 q23 Seq+ 37164 ChimerSeq STARFusion TCGA_RNA-Seq DCAF15-C19orf57 DCAF15 chr19 14063456 + C19orf57 chr19 14004036 - Exonic hg19 LUSC TCGA-52-7810 3 6 Out-of-frame Intra-chr p13.12 p13.12 Seq+ 37165 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP32-TP53AIP1 ARHGAP32 chr11 128963516 - TP53AIP1 chr11 128806544 - Exonic hg19 LUSC TCGA-52-7810 2 7 In-Frame Intra-chr q24.3 q24.3 Seq+ 37166 ChimerSeq STARFusion TCGA_RNA-Seq DSTN-ARPC5 DSTN chr20 17550856 + ARPC5 chr1 183599772 - Exonic hg19 LUSC TCGA-52-7812 16 106 In-Frame Inter-chr p12.1 q25.3 Seq+ 37167 ChimerSeq STARFusion TCGA_RNA-Seq DSTN-ARPC5 DSTN chr20 17550856 + ARPC5 chr1 183602360 - Exonic hg19 LUSC TCGA-52-7812 14 104 5'UTR-CDS Inter-chr p12.1 q25.3 Seq+ 37168 ChimerSeq STARFusion TCGA_RNA-Seq DSTN-ARPC5 DSTN chr20 17550856 + ARPC5 chr1 183602287 - Exonic hg19 LUSC TCGA-52-7812 6 104 Out-of-frame Inter-chr p12.1 q25.3 Seq+ 37169 ChimerSeq STARFusion TCGA_RNA-Seq ATP2C1-COL6A6 ATP2C1 chr3 130649370 + COL6A6 chr3 130394046 + Exonic hg19 LUSC TCGA-52-7812 16 50 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 37170 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF3-HSCB ZNRF3 chr22 29383189 + HSCB chr22 29147229 + Exonic hg19 LUSC TCGA-52-7812 3 21 Out-of-frame Intra-chr q12.1 q12.1 37171 ChimerSeq STARFusion TCGA_RNA-Seq SPAG7-ENO3 SPAG7 chr17 4863055 - ENO3 chr17 4860273 + Exonic hg19 LUSC TCGA-85-A5B5 2 9 Out-of-frame Intra-chr p13.2 p13.2 37172 ChimerSeq STARFusion TCGA_RNA-Seq SPPL3-ACADS SPPL3 chr12 121341648 - ACADS chr12 121164829 + Exonic hg19 LUSC TCGA-85-8479 14 29 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 37173 ChimerSeq STARFusion TCGA_RNA-Seq MGA-SPTBN5 MGA chr15 42052727 + SPTBN5 chr15 42149908 - Exonic hg19 LUSC TCGA-85-8479 10 34 In-Frame Intra-chr q15.1 Transcription factor q15.1 Seq+ 37174 ChimerSeq STARFusion TCGA_RNA-Seq THRA-PSMD3 THRA chr17 38241068 + PSMD3 chr17 38142828 + Exonic hg19 LUSC TCGA-85-8479 2 39 In-Frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Seq+ 37175 ChimerSeq STARFusion TCGA_RNA-Seq UBQLN4-MEF2D UBQLN4 chr1 156023385 - MEF2D chr1 156453222 - Exonic hg19 LUSC TCGA-85-8479 6 19 CDS-5'UTR Intra-chr q22 q22 Transcription factor Seq+ 37176 ChimerSeq STARFusion TCGA_RNA-Seq SPPL3-UNC119B SPPL3 chr12 121341648 - UNC119B chr12 121157723 + Exonic hg19 LUSC TCGA-85-8479 5 10 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 37177 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106054734 - Exonic hg19 LUSC TCGA-56-8305 13 2 Out-of-frame Inter-chr q24.2 32.33 37178 ChimerSeq STARFusion TCGA_RNA-Seq PSMC3-IGH@ PSMC3 chr11 47441893 - IGH@ chr14 106331651 - Exonic hg19 LUSC TCGA-56-8305 11 2 Out-of-frame Inter-chr p11.2 32.33 37179 ChimerSeq STARFusion TCGA_RNA-Seq RXRA-IGH@ RXRA chr9 137326058 + IGH@ chr14 106111065 - Exonic hg19 LUSC TCGA-56-8305 8 1 Out-of-frame Inter-chr q34.2 Transcription factor 32.33 37180 ChimerSeq STARFusion TCGA_RNA-Seq RXRA-IGHG2 RXRA chr9 137326058 + IGHG2 chr14 106111065 - Exonic hg19 LUSC TCGA-56-8305 8 1 Out-of-frame Inter-chr q34.2 Transcription factor 37181 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525072 - IGHG1 chr14 106209410 - Exonic hg19 LUSC TCGA-56-8305 8 0 Out-of-frame Inter-chr q34 Oncogene q32.33 37182 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGH@ INTS1 chr7 1511981 - IGH@ chr14 106209410 - Exonic hg19 LUSC TCGA-56-8305 7 2 Out-of-frame Inter-chr p22.3 32.33 37183 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868138 - IGH@ chr14 106209411 - Exonic hg19 LUSC TCGA-56-8305 7 2 Out-of-frame Inter-chr q24.2 32.33 37184 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHG1 SLC7A5 chr16 87868138 - IGHG1 chr14 106209411 - Exonic hg19 LUSC TCGA-56-8305 7 2 Out-of-frame Inter-chr q24.2 q32.33 37185 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGHG1 INTS1 chr7 1511981 - IGHG1 chr14 106209410 - Exonic hg19 LUSC TCGA-56-8305 7 1 Out-of-frame Inter-chr p22.3 q32.33 37186 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGH@ INTS1 chr7 1511981 - IGH@ chr14 106136184 - Exonic hg19 LUSC TCGA-56-8305 6 1 Out-of-frame Inter-chr p22.3 32.33 37187 ChimerSeq STARFusion TCGA_RNA-Seq POLR2A-IGL@ POLR2A chr17 7407125 + IGL@ chr22 23247175 + Exonic hg19 LUSC TCGA-56-8305 6 1 Out-of-frame Inter-chr p13.1 q11.22 37188 ChimerSeq STARFusion TCGA_RNA-Seq PLRG1-IGKC PLRG1 chr4 155457287 - IGKC chr2 89161437 - Exonic hg19 LUSC TCGA-56-8304 42 1 Out-of-frame Inter-chr q31.3 p11.2 37189 ChimerSeq STARFusion TCGA_RNA-Seq ITM2B-RB1 ITM2B chr13 48828072 + RB1 chr13 49027129 + Exonic hg19 LUSC TCGA-56-8307 28 172 In-Frame Intra-chr q14.2 q14.2 Oncogene Tumor suppressor gene Seq+ 37190 ChimerSeq STARFusion TCGA_RNA-Seq ITM2B-RB1 ITM2B chr13 48830519 + RB1 chr13 49027129 + Exonic hg19 LUSC TCGA-56-8307 13 168 In-Frame Intra-chr q14.2 q14.2 Oncogene Tumor suppressor gene Seq+ 37191 ChimerSeq STARFusion TCGA_RNA-Seq CLCN4-TFAP2A CLCN4 chrX 10126591 + TFAP2A chr6 10398938 - Exonic hg19 LUSC TCGA-56-8307 23 78 5'UTR-CDS Inter-chr p22.2 p24.3 Tumor suppressor gene Transcription factor Seq+ 37192 ChimerSeq STARFusion TCGA_RNA-Seq CLCN4-TFAP2A CLCN4 chrX 10126591 + TFAP2A chr6 10393794 - Exonic hg19 LUSC TCGA-56-8307 22 78 5'UTR-3'UTR Inter-chr p22.2 p24.3 Tumor suppressor gene Transcription factor Seq+ 37193 ChimerSeq STARFusion TCGA_RNA-Seq CLCN4-TFAP2A CLCN4 chrX 10126591 + TFAP2A chr6 10398934 - Exonic hg19 LUSC TCGA-56-8307 3 78 5'UTR-CDS Inter-chr p22.2 p24.3 Tumor suppressor gene Transcription factor Seq+ 37194 ChimerSeq STARFusion TCGA_RNA-Seq CDKAL1-CLCN4 CDKAL1 chr6 20535625 + CLCN4 chrX 10153062 + Exonic hg19 LUSC TCGA-56-8307 7 14 5'UTR-5'UTR Inter-chr p22.3 p22.2 Seq+ 37195 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 LUSC TCGA-56-8307 3 6 CDS-5'UTR Intra-chr q23 Seq+ 37196 ChimerSeq STARFusion TCGA_RNA-Seq JUP-LEPREL4 JUP chr17 39942840 - LEPREL4 chr17 39959683 - Exonic hg19 LUSC TCGA-33-4586 17 63 5'UTR-CDS Intra-chr q21.2 Tumor suppressor gene 37197 ChimerSeq STARFusion TCGA_RNA-Seq JUP-LEPREL4 JUP chr17 39942155 - LEPREL4 chr17 39959683 - Exonic hg19 LUSC TCGA-33-4586 5 63 5'UTR-CDS Intra-chr q21.2 Tumor suppressor gene 37198 ChimerSeq STARFusion TCGA_RNA-Seq FRMD8-POLA2 FRMD8 chr11 65156999 + POLA2 chr11 65049950 + Exonic hg19 LUSC TCGA-33-4586 4 13 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 37199 ChimerSeq STARFusion TCGA_RNA-Seq PTRH2-RNFT1 PTRH2 chr17 57784732 - RNFT1 chr17 58035805 - Exonic hg19 LUSC TCGA-33-4586 2 11 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 37200 ChimerSeq STARFusion TCGA_RNA-Seq MED15-PI4KA MED15 chr22 20855123 + PI4KA chr22 21104282 - Exonic hg19 LUSC TCGA-66-2793 94 540 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 37201 ChimerSeq STARFusion TCGA_RNA-Seq PQBP1-ERAS PQBP1 chrX 48755297 + ERAS chrX 48687491 + Exonic hg19 LUSC TCGA-66-2793 28 191 5'UTR-5'UTR Intra-chr p11.23 p11.23 Seq+ 37202 ChimerSeq STARFusion TCGA_RNA-Seq PQBP1-ERAS PQBP1 chrX 48755365 + ERAS chrX 48687491 + Exonic hg19 LUSC TCGA-66-2793 14 191 5'UTR-5'UTR Intra-chr p11.23 p11.23 Seq+ 37203 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H3-PYCRL ZC3H3 chr8 144618427 - PYCRL chr8 144690296 - Exonic hg19 LUSC TCGA-66-2793 11 31 In-Frame Intra-chr Seq+ 37204 ChimerSeq STARFusion TCGA_RNA-Seq KLHL22-ZNF74 KLHL22 chr22 20843272 - ZNF74 chr22 20738278 + Exonic hg19 LUSC TCGA-66-2793 3 33 CDS-5'UTR Intra-chr q11.21 q11.21 Transcription factor Seq+ 37205 ChimerSeq STARFusion TCGA_RNA-Seq KLHL22-ZNF74 KLHL22 chr22 20843272 - ZNF74 chr22 20754922 + Exonic hg19 LUSC TCGA-66-2793 2 32 Out-of-frame Intra-chr q11.21 q11.21 Transcription factor Seq+ 37206 ChimerSeq STARFusion TCGA_RNA-Seq PTPN2-FTL PTPN2 chr18 12859163 - FTL chr19 49468607 + Exonic hg19 LUSC TCGA-66-2793 4 10 CDS-5'UTR Inter-chr p11.21 Tumor suppressor gene q13.33 Seq+ 37207 ChimerSeq STARFusion TCGA_RNA-Seq RPN2-MYL9 RPN2 chr20 35842268 + MYL9 chr20 35177480 + Exonic hg19 LUSC TCGA-66-2793 3 6 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 37208 ChimerSeq STARFusion TCGA_RNA-Seq JDP2-FLVCR2 JDP2 chr14 75899039 + FLVCR2 chr14 76088422 + Exonic hg19 LUSC TCGA-66-2793 3 4 Out-of-frame Intra-chr q24.3 Tumor suppressor gene Transcription factor q24.3 Seq+ 37209 ChimerSeq STARFusion TCGA_RNA-Seq ATP1B3-GRK7 ATP1B3 chr3 141595752 + GRK7 chr3 141526487 + Exonic hg19 LUSC TCGA-66-2792 6 32 Out-of-frame Intra-chr q23 q23 Seq+ 37210 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG4 STK25 chr2 242434915 - IGHG4 chr14 106136184 - Exonic hg19 LUSC TCGA-66-2791 103 1 Out-of-frame Inter-chr q37.3 37211 ChimerSeq STARFusion TCGA_RNA-Seq ELMO1-IGH@ ELMO1 chr7 37025574 - IGH@ chr14 107170239 - Exonic hg19 LUSC TCGA-66-2791 69 1 Out-of-frame Inter-chr p14.1 32.33 37212 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG4 STK25 chr2 242434915 - IGHG4 chr14 106092405 - Exonic hg19 LUSC TCGA-66-2791 61 1 Out-of-frame Inter-chr q37.3 37213 ChimerSeq STARFusion TCGA_RNA-Seq AAK1-NFU1 AAK1 chr2 69870010 - NFU1 chr2 69650849 - Exonic hg19 LUSC TCGA-66-2791 14 53 In-Frame Intra-chr p13.3 Other:NAK p13.3 37214 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG4 STK25 chr2 242434915 - IGHG4 chr14 106111129 - Exonic hg19 LUSC TCGA-66-2791 20 1 Out-of-frame Inter-chr q37.3 37215 ChimerSeq STARFusion TCGA_RNA-Seq AAK1-NFU1 AAK1 chr2 69870010 - NFU1 chr2 69646736 - Exonic hg19 LUSC TCGA-66-2791 3 50 Out-of-frame Intra-chr p13.3 Other:NAK p13.3 37216 ChimerSeq STARFusion TCGA_RNA-Seq COASY-IGHA1 COASY chr17 40714609 + IGHA1 chr14 106175003 - Exonic hg19 LUSC TCGA-66-2791 10 0 Out-of-frame Inter-chr q21.2 37217 ChimerSeq STARFusion TCGA_RNA-Seq TBRG4-IGLC3 TBRG4 chr7 45148519 - IGLC3 chr22 23247170 + Exonic hg19 LUSC TCGA-66-2791 10 0 Out-of-frame Inter-chr p13 q11.22 37218 ChimerSeq STARFusion TCGA_RNA-Seq TBRG4-IGLJ3 TBRG4 chr7 45148519 - IGLJ3 chr22 23247170 + Exonic hg19 LUSC TCGA-66-2791 10 0 Out-of-frame Inter-chr p13 q11.22 37219 ChimerSeq STARFusion TCGA_RNA-Seq ANKFY1-IGKC ANKFY1 chr17 4067437 - IGKC chr2 89161433 - Exonic hg19 LUSC TCGA-66-2791 9 1 Out-of-frame Inter-chr p13.2 p11.2 37220 ChimerSeq STARFusion TCGA_RNA-Seq TCTN1-CCDC63 TCTN1 chr12 111057761 + CCDC63 chr12 111296390 + Exonic hg19 LUSC TCGA-66-2791 2 13 In-Frame Intra-chr q24.11 q24.11 Seq+ 37221 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-IL32 IGH@ chr14 106725199 - IL32 chr16 3118223 + Exonic hg19 LUSC TCGA-66-2790 36 3 Out-of-frame Inter-chr 32.33 p13.3 37222 ChimerSeq STARFusion TCGA_RNA-Seq APOO-CNKSR2 APOO chrX 23897032 - CNKSR2 chrX 21488884 + Exonic hg19 LUSC TCGA-66-2790 6 31 In-Frame Intra-chr p22.11 p22.12 Seq+ 37223 ChimerSeq STARFusion TCGA_RNA-Seq CCZ1-IGL@ CCZ1 chr7 5959115 + IGL@ chr22 23247170 + Exonic hg19 LUSC TCGA-66-2790 8 1 Out-of-frame Inter-chr p22.1 q11.22 37224 ChimerSeq STARFusion TCGA_RNA-Seq RCOR1-TRAF3 RCOR1 chr14 103188753 + TRAF3 chr14 103296671 + Exonic hg19 LUSC TCGA-66-2790 2 6 CDS-5'UTR Intra-chr q32.31 q32.32 37225 ChimerSeq STARFusion TCGA_RNA-Seq NFX1-NOL6 NFX1 chr9 33332500 + NOL6 chr9 33470189 - Exonic hg19 LUSC TCGA-77-A5GA 2 4 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 37226 ChimerSeq STARFusion TCGA_RNA-Seq TAX1BP3-C17orf85 TAX1BP3 chr17 3571782 - C17orf85 chr17 3719564 - Exonic hg19 LUSC TCGA-66-2795 11 53 Out-of-frame Intra-chr p13.2 Seq+ 37227 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG3 STK25 chr2 242434915 - IGHG3 chr14 106237745 - Exonic hg19 LUSC TCGA-66-2795 13 1 Out-of-frame Inter-chr q37.3 37228 ChimerSeq STARFusion TCGA_RNA-Seq PEPD-NME7 PEPD chr19 33953901 - NME7 chr1 169293738 - Exonic hg19 LUSC TCGA-66-2795 4 10 Out-of-frame Inter-chr q13.11 q24.2 Seq+ 37229 ChimerSeq STARFusion TCGA_RNA-Seq NRBP1-IGHG1 NRBP1 chr2 27664677 + IGHG1 chr14 106209407 - Exonic hg19 LUSC TCGA-66-2795 5 1 Out-of-frame Inter-chr p23.3 Other:NRBP Tumor suppressor gene q32.33 37230 ChimerSeq STARFusion TCGA_RNA-Seq DSP-IGH@ DSP chr6 7584629 + IGH@ chr14 106330063 - Exonic hg19 LUSC TCGA-66-2795 3 4 Out-of-frame Inter-chr p24.3 Tumor suppressor gene 32.33 37231 ChimerSeq STARFusion TCGA_RNA-Seq SAMD12-EXT1 SAMD12 chr8 119391799 - EXT1 chr8 118849440 - Exonic hg19 LUSC TCGA-66-2794 15 49 Out-of-frame Intra-chr q24.12 q24.11 Oncogene Tumor suppressor gene 37232 ChimerSeq STARFusion TCGA_RNA-Seq PAPSS2-BID PAPSS2 chr10 89469070 + BID chr22 18222254 - Exonic hg19 LUSC TCGA-77-A5GH 10 16 In-Frame Inter-chr q23.2 q11.21 Seq+ 37233 ChimerSeq STARFusion TCGA_RNA-Seq PUM2-C2orf43 PUM2 chr2 20478344 - C2orf43 chr2 20886854 - Exonic hg19 LUSC TCGA-77-A5GH 3 26 Out-of-frame Intra-chr p24.1 Seq+ 37234 ChimerSeq STARFusion TCGA_RNA-Seq MGAT3-SYNGR1 MGAT3 chr22 39853562 + SYNGR1 chr22 39770321 + Exonic hg19 LUSC TCGA-77-A5GH 5 15 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 37235 ChimerSeq STARFusion TCGA_RNA-Seq CD74-IGKC CD74 chr5 149786536 - IGKC chr2 89161068 - Exonic hg19 LUSC TCGA-77-A5GH 7 2 Out-of-frame Inter-chr q33.1 p11.2 37236 ChimerSeq STARFusion TCGA_RNA-Seq TRABD2A-CHMP3 TRABD2A chr2 85059179 - CHMP3 chr2 86734716 - Exonic hg19 LUSC TCGA-77-A5GH 5 9 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 37237 ChimerSeq STARFusion TCGA_RNA-Seq ATRX-LPAR4 ATRX chrX 77041468 - LPAR4 chrX 78006707 + Exonic hg19 LUSC TCGA-77-A5GH 2 15 CDS-5'UTR Intra-chr q21.1 Oncogene q21.1 Seq+ 37238 ChimerSeq STARFusion TCGA_RNA-Seq NOL9-DNAJC11 NOL9 chr1 6609631 - DNAJC11 chr1 6714099 - Exonic hg19 LUSC TCGA-77-A5GH 3 7 In-Frame Intra-chr p36.31 p36.31 Tumor suppressor gene Seq+ 37239 ChimerSeq STARFusion TCGA_RNA-Seq RWDD1-FAM26D RWDD1 chr6 116906020 + FAM26D chr6 116878988 + Exonic hg19 LUSC TCGA-77-A5GH 3 6 In-Frame Intra-chr q22.1 q22.1 Seq+ 37240 ChimerSeq STARFusion TCGA_RNA-Seq GOLT1B-IAPP GOLT1B chr12 21661495 + IAPP chr12 21526271 + Exonic hg19 LUSC TCGA-77-A5GH 2 7 CDS-5'UTR Intra-chr p12.1 p12.1 Seq+ 37241 ChimerSeq STARFusion TCGA_RNA-Seq NOL9-DNAJC11 NOL9 chr1 6609631 - DNAJC11 chr1 6714347 - Exonic hg19 LUSC TCGA-77-A5GH 2 7 Out-of-frame Intra-chr p36.31 p36.31 Tumor suppressor gene Seq+ 37242 ChimerSeq STARFusion TCGA_RNA-Seq AFAP1-ABLIM2 AFAP1 chr4 7941383 - ABLIM2 chr4 8010829 - Exonic hg19 LUSC TCGA-77-A5GH 2 6 5'UTR-CDS Intra-chr p16.1 p16.1 Seq+ 37243 ChimerSeq STARFusion TCGA_RNA-Seq MBNL2-GLI3 MBNL2 chr13 98018807 + GLI3 chr7 42188067 - Exonic hg19 LUSC TCGA-77-A5GH 2 6 Out-of-frame Inter-chr q32.1 Transcription factor p14.1 Transcription factor Seq+ 37244 ChimerSeq STARFusion TCGA_RNA-Seq SCYL3-KIFAP3 SCYL3 chr1 169842837 - KIFAP3 chr1 169923251 - Exonic hg19 LUSC TCGA-77-A5GH 2 6 Out-of-frame Intra-chr q24.2 Other:SCY1 q24.2 Seq+ 37245 ChimerSeq STARFusion TCGA_RNA-Seq POU2AF1-BTG4 POU2AF1 chr11 111249887 - BTG4 chr11 111369527 - Exonic hg19 LUSC TCGA-77-A5GH 2 5 CDS-5'UTR Intra-chr q23.1 Transcription factor q23.1 Tumor suppressor gene Seq+ 37246 ChimerSeq STARFusion TCGA_RNA-Seq SLCO2A1-RYK SLCO2A1 chr3 133748551 - RYK chr3 133907767 - Exonic hg19 LUSC TCGA-77-A5GH 2 5 Out-of-frame Intra-chr q22.2 q22.2 TK:Ryk Seq+ 37247 ChimerSeq STARFusion TCGA_RNA-Seq ATG5-NTM ATG5 chr6 106696025 - NTM chr11 131781458 + Exonic hg19 LUSC TCGA-77-A5G6 16 78 Out-of-frame Inter-chr q21 q25 Seq+ 37248 ChimerSeq STARFusion TCGA_RNA-Seq ATG5-NTM ATG5 chr6 106696025 - NTM chr11 131530823 + Exonic hg19 LUSC TCGA-77-A5G6 4 65 CDS-5'UTR Inter-chr q21 q25 Seq+ 37249 ChimerSeq STARFusion TCGA_RNA-Seq EML1-TTLL5 EML1 chr14 100259880 + TTLL5 chr14 76349028 + Exonic hg19 LUSC TCGA-77-A5G6 12 13 Out-of-frame Intra-chr q32.2 q24.3 Seq+ 37250 ChimerSeq STARFusion TCGA_RNA-Seq RAD51B-MARK3 RAD51B chr14 68353921 + MARK3 chr14 103946724 + Exonic hg19 LUSC TCGA-77-A5G6 8 15 In-Frame Intra-chr q24.1 q32.32 CAMK:CAMKL Seq+ 37251 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KA5-ITPK1 RPS6KA5 chr14 91386550 - ITPK1 chr14 93483146 - Exonic hg19 LUSC TCGA-77-A5G6 6 7 Out-of-frame Intra-chr q32.11 Seq+ 37252 ChimerSeq STARFusion TCGA_RNA-Seq ARAP2-PDS5A ARAP2 chr4 36093503 - PDS5A chr4 39871082 - Exonic hg19 LUSC TCGA-77-A5G6 4 13 In-Frame Intra-chr p14 p14 Seq+ 37253 ChimerSeq STARFusion TCGA_RNA-Seq TTLL5-RGS6 TTLL5 chr14 76249873 + RGS6 chr14 72921236 + Exonic hg19 LUSC TCGA-77-A5G6 3 11 In-Frame Intra-chr q24.3 q24.2 Seq+ 37254 ChimerSeq STARFusion TCGA_RNA-Seq CCAT1-CASC8 CCAT1 chr8 128231055 - CASC8 chr8 128302305 - Exonic hg19 LUSC TCGA-77-A5G7 24 75 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 37255 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1G1-PPIB CSNK1G1 chr15 64592518 - PPIB chr15 64449108 - Exonic hg19 LUSC TCGA-77-A5G7 3 18 In-Frame Intra-chr q22.31 q22.31 Seq+ 37256 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1G1-PPIB CSNK1G1 chr15 64592518 - PPIB chr15 64452396 - Exonic hg19 LUSC TCGA-77-A5G7 2 18 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 37257 ChimerSeq STARFusion TCGA_RNA-Seq TP63-TPRG1 TP63 chr3 189349366 + TPRG1 chr3 189028175 + Exonic hg19 LUSC TCGA-77-A5G7 3 7 In-Frame Intra-chr q28 Tumor suppressor gene Transcription factor q28 Seq+ 37258 ChimerSeq STARFusion TCGA_RNA-Seq WSB1-IGH@ WSB1 chr17 25621297 + IGH@ chr14 106330839 - Exonic hg19 LUSC TCGA-22-4613 14 1 Out-of-frame Inter-chr q11.1 32.33 37259 ChimerSeq STARFusion TCGA_RNA-Seq WSB1-IGHG3 WSB1 chr17 25621297 + IGHG3 chr14 106330839 - Exonic hg19 LUSC TCGA-22-4613 14 1 Out-of-frame Inter-chr q11.1 37260 ChimerSeq STARFusion TCGA_RNA-Seq SPOP-SLC35B1 SPOP chr17 47684612 - SLC35B1 chr17 47781588 - Exonic hg19 LUSC TCGA-22-4613 6 29 In-Frame Intra-chr q21.33 Oncogene Tumor suppressor gene q21.33 Seq+ 37261 ChimerSeq STARFusion TCGA_RNA-Seq PLAA-LINGO2 PLAA chr9 26935011 - LINGO2 chr9 27950704 - Exonic hg19 LUSC TCGA-22-4613 2 19 CDS-5'UTR Intra-chr p21.2 p21.1 Seq+ 37262 ChimerSeq STARFusion TCGA_RNA-Seq THOC5-SPATA16 THOC5 chr22 29935319 - SPATA16 chr3 172737365 - Exonic hg19 LUSC TCGA-22-4613 3 4 In-Frame Inter-chr q12.2 q26.31 Seq+ 37263 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1191-NOP16 KIAA1191 chr5 175777616 - NOP16 chr5 175811375 - Exonic hg19 LUSC TCGA-94-8491 32 120 In-Frame Intra-chr q35.2 q35.2 Seq+ 37264 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1191-NOP16 KIAA1191 chr5 175777616 - NOP16 chr5 175811284 - Exonic hg19 LUSC TCGA-94-8491 4 117 In-Frame Intra-chr q35.2 q35.2 Seq+ 37265 ChimerSeq STARFusion TCGA_RNA-Seq FAM157B-CCDC155 FAM157B chr9 141121553 + CCDC155 chr19 49897733 + Exonic hg19 LUSC TCGA-94-8491 15 61 In-Frame Inter-chr q34.3 q13.33 Seq+ 37266 ChimerSeq STARFusion TCGA_RNA-Seq STIP1-MS4A18 STIP1 chr11 63965446 + MS4A18 chr11 60496777 + Exonic hg19 LUSC TCGA-94-8491 11 46 Out-of-frame Intra-chr q13.1 Seq+ 37267 ChimerSeq STARFusion TCGA_RNA-Seq GIGYF2-EFHD1 GIGYF2 chr2 233562102 + EFHD1 chr2 233546295 + Exonic hg19 LUSC TCGA-94-8491 20 8 5'UTR-CDS Intra-chr q37.1 q37.1 Seq+ 37268 ChimerSeq STARFusion TCGA_RNA-Seq UNC13D-FBF1 UNC13D chr17 73838514 - FBF1 chr17 73919722 - Exonic hg19 LUSC TCGA-94-8491 4 46 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 37269 ChimerSeq STARFusion TCGA_RNA-Seq UNC13D-FBF1 UNC13D chr17 73838514 - FBF1 chr17 73919719 - Exonic hg19 LUSC TCGA-94-8491 3 46 In-Frame Intra-chr q25.1 q25.1 Seq+ 37270 ChimerSeq STARFusion TCGA_RNA-Seq PAXIP1-NCAPG2 PAXIP1 chr7 154790360 - NCAPG2 chr7 158424409 - Exonic hg19 LUSC TCGA-94-8491 7 26 Out-of-frame Intra-chr q36.2 q36.3 Seq+ 37271 ChimerSeq STARFusion TCGA_RNA-Seq G3BP1-SLC36A1 G3BP1 chr5 151151597 + SLC36A1 chr5 150856151 + Exonic hg19 LUSC TCGA-94-8491 7 16 5'UTR-CDS Intra-chr q33.1 q33.1 Seq+ 37272 ChimerSeq STARFusion TCGA_RNA-Seq MYO1C-YWHAE MYO1C chr17 1385772 - YWHAE chr17 1248793 - Exonic hg19 LUSC TCGA-94-8491 3 27 Out-of-frame Intra-chr p13.3 p13.3 37273 ChimerSeq STARFusion TCGA_RNA-Seq MYO1C-SMG6 MYO1C chr17 1377904 - SMG6 chr17 1989195 - Exonic hg19 LUSC TCGA-94-8491 6 14 In-Frame Intra-chr p13.3 p13.3 Seq+ 37274 ChimerSeq STARFusion TCGA_RNA-Seq SLC35E2B-GNB1 SLC35E2B chr1 1606902 - GNB1 chr1 1724750 - Exonic hg19 LUSC TCGA-94-8491 2 21 In-Frame Intra-chr p36.33 p36.33 37275 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPUL1-ANKRD30BP2 HNRNPUL1 chr19 41785081 + ANKRD30BP2 chr21 14424117 + Exonic hg19 LUSC TCGA-94-8491 4 7 CDS-5'UTR Inter-chr q13.2 q11.2 37276 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM6-NDUFAF2 ZSWIM6 chr5 60628775 + NDUFAF2 chr5 60368952 + Exonic hg19 LUSC TCGA-94-8491 5 3 In-Frame Intra-chr q12.1 q12.1 Seq+ 37277 ChimerSeq STARFusion TCGA_RNA-Seq SOS1-CDKL4 SOS1 chr2 39347477 - CDKL4 chr2 39417643 - Exonic hg19 LUSC TCGA-94-8491 2 10 Out-of-frame Intra-chr p22.1 p22.1 CMGC:CDKL Seq+ 37278 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP42-SBF2 ARHGAP42 chr11 100558563 + SBF2 chr11 9812230 - Exonic hg19 LUSC TCGA-94-8491 2 8 In-Frame Intra-chr q22.1 p15.4 Seq+ 37279 ChimerSeq STARFusion TCGA_RNA-Seq LTBP1-BIRC6 LTBP1 chr2 33360027 + BIRC6 chr2 32818982 + Exonic hg19 LUSC TCGA-94-8491 2 7 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 37280 ChimerSeq STARFusion TCGA_RNA-Seq NEK7-RAB3GAP2 NEK7 chr1 198126406 + RAB3GAP2 chr1 220387321 - Exonic hg19 LUSC TCGA-94-8491 2 7 5'UTR-CDS Intra-chr q31.3 Other:NEK q41 Seq+ 37281 ChimerSeq STARFusion TCGA_RNA-Seq PDCD2L-GPI PDCD2L chr19 34912572 + GPI chr19 34884153 + Exonic hg19 LUSC TCGA-94-8491 2 5 Out-of-frame Intra-chr q13.11 37282 ChimerSeq STARFusion TCGA_RNA-Seq GCSH-PKD1L2 GCSH chr16 81129736 - PKD1L2 chr16 81157389 - Exonic hg19 LUSC TCGA-94-8490 5 17 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 37283 ChimerSeq STARFusion TCGA_RNA-Seq IRF6-SRGAP2 IRF6 chr1 209979292 - SRGAP2 chr1 206610315 + Exonic hg19 LUSC TCGA-94-8490 3 13 5'UTR-CDS Intra-chr q32.2 Transcription factor q32.1 Tumor suppressor gene Seq+ 37284 ChimerSeq STARFusion TCGA_RNA-Seq RBL1-RPN2 RBL1 chr20 35672489 - RPN2 chr20 35852281 + Exonic hg19 LUSC TCGA-77-A5G8 2 6 In-Frame Intra-chr q11.23 Tumor suppressor gene q11.23 37285 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1 FTL chr19 49469663 + FTH1 chr11 61732363 - Exonic hg19 LUSC TCGA-77-A5G8 2 4 In-Frame Inter-chr q13.33 q12.3 37286 ChimerSeq STARFusion TCGA_RNA-Seq MAPK1-SSU72 MAPK1 chr22 22221612 - SSU72 chr1 1480382 - Exonic hg19 LUSC TCGA-85-7697 9 31 In-Frame Inter-chr q11.22 Oncogene p36.33 Seq+ 37287 ChimerSeq STARFusion TCGA_RNA-Seq AGPS-HNRNPA3 AGPS chr2 178310354 + HNRNPA3 chr2 178080267 + Exonic hg19 LUSC TCGA-85-7697 5 34 In-Frame Intra-chr q31.2 q31.2 37288 ChimerSeq STARFusion TCGA_RNA-Seq ATP1A1-SORT1 ATP1A1 chr1 116930113 + SORT1 chr1 109912211 - Exonic hg19 LUSC TCGA-85-7697 5 14 In-Frame Intra-chr p13.1 p13.3 Seq+ 37289 ChimerSeq STARFusion TCGA_RNA-Seq LIMCH1-OCIAD2 LIMCH1 chr4 41362953 + OCIAD2 chr4 48906628 - Exonic hg19 LUSC TCGA-22-A5C4 48 220 CDS-5'UTR Intra-chr p13 p11 Seq+ 37290 ChimerSeq STARFusion TCGA_RNA-Seq AAK1-WFDC13 AAK1 chr2 69732701 - WFDC13 chr20 44333083 + Exonic hg19 LUSC TCGA-22-A5C4 19 57 In-Frame Inter-chr p13.3 Other:NAK q13.12 Seq+ 37291 ChimerSeq STARFusion TCGA_RNA-Seq STIM2-GATAD2A STIM2 chr4 26921256 + GATAD2A chr19 19576149 + Exonic hg19 LUSC TCGA-22-A5C4 14 56 CDS-5'UTR Inter-chr p15.2 p13.11 Transcription factor Seq+ 37292 ChimerSeq STARFusion TCGA_RNA-Seq FAHD2B-DROSHA FAHD2B chr2 97755846 - DROSHA chr5 31407052 - Exonic hg19 LUSC TCGA-22-A5C4 7 67 Out-of-frame Inter-chr q11.2 p13.3 Seq+ 37293 ChimerSeq STARFusion TCGA_RNA-Seq AAK1-WFDC13 AAK1 chr2 69723117 - WFDC13 chr20 44333083 + Exonic hg19 LUSC TCGA-22-A5C4 6 56 In-Frame Inter-chr p13.3 Other:NAK q13.12 Seq+ 37294 ChimerSeq STARFusion TCGA_RNA-Seq PTPRA-SDAD1 PTPRA chr20 3018775 + SDAD1 chr4 76879094 - Exonic hg19 LUSC TCGA-22-A5C4 13 24 Out-of-frame Inter-chr p13 q21.1 Seq+ 37295 ChimerSeq STARFusion TCGA_RNA-Seq ACSS1-DBNDD2 ACSS1 chr20 25038405 - DBNDD2 chr20 44037100 + Exonic hg19 LUSC TCGA-22-A5C4 10 28 CDS-5'UTR Intra-chr p11.21 q13.12 Seq+ 37296 ChimerSeq STARFusion TCGA_RNA-Seq PLCB1-MCM8 PLCB1 chr20 8703068 + MCM8 chr20 5937772 + Exonic hg19 LUSC TCGA-22-A5C4 7 38 In-Frame Intra-chr p12.3 p12.3 Seq+ 37297 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 LUSC TCGA-22-A5C4 16 0 Out-of-frame Inter-chr q13.33 p21.1 37298 ChimerSeq STARFusion TCGA_RNA-Seq MAGED1-CYP4F2 MAGED1 chrX 51643392 + CYP4F2 chr19 16003392 - Exonic hg19 LUSC TCGA-22-A5C4 5 42 CDS-5'UTR Inter-chr p11.22 p13.12 Seq+ 37299 ChimerSeq STARFusion TCGA_RNA-Seq MKKS-MMP24 MKKS chr20 10414756 - MMP24 chr20 33834643 + Exonic hg19 LUSC TCGA-22-A5C4 7 10 5'UTR-CDS Intra-chr p12.2 q11.22 Seq+ 37300 ChimerSeq STARFusion TCGA_RNA-Seq CCNY-VWA3B CCNY chr10 35790463 + VWA3B chr2 98906974 + Exonic hg19 LUSC TCGA-22-A5C4 5 16 In-Frame Inter-chr p11.21 q11.2 Seq+ 37301 ChimerSeq STARFusion TCGA_RNA-Seq STK32B-SMIM14 STK32B chr4 5141687 + SMIM14 chr4 39606800 - Exonic hg19 LUSC TCGA-22-A5C4 3 16 Out-of-frame Intra-chr p16.2 p14 Seq+ 37302 ChimerSeq STARFusion TCGA_RNA-Seq KIF2A-IPO11 KIF2A chr5 61602363 + IPO11 chr5 61762958 + Exonic hg19 LUSC TCGA-22-A5C4 4 9 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 37303 ChimerSeq STARFusion TCGA_RNA-Seq PLCB1-RBL1 PLCB1 chr20 8131018 + RBL1 chr20 35651229 - Exonic hg19 LUSC TCGA-22-A5C4 2 17 In-Frame Intra-chr p12.3 q11.23 Tumor suppressor gene Seq+ 37304 ChimerSeq STARFusion TCGA_RNA-Seq AVL9-LSM5 AVL9 chr7 32535414 + LSM5 chr7 32528956 - Exonic hg19 LUSC TCGA-22-A5C4 2 14 Out-of-frame Intra-chr p14.3 p14.3 37305 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R16B-FAM83D PPP1R16B chr20 37464818 + FAM83D chr20 37570602 + Exonic hg19 LUSC TCGA-22-A5C4 2 9 Out-of-frame Intra-chr q11.23 q11.23 37306 ChimerSeq STARFusion TCGA_RNA-Seq CXorf23-POLA1 CXorf23 chrX 19932270 - POLA1 chrX 24828015 + Exonic hg19 LUSC TCGA-22-A5C4 2 7 3'UTR-CDS Intra-chr p22.12 p22.11 Seq+ 37307 ChimerSeq STARFusion TCGA_RNA-Seq ZNF768-LAT ZNF768 chr16 30536326 - LAT chr16 29000848 + Exonic hg19 LUSC TCGA-77-8154 7 32 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 37308 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-NADK GNB1 chr1 1822259 - NADK chr1 1696885 - Exonic hg19 LUSC TCGA-77-8154 8 5 5'UTR-5'UTR Intra-chr p36.33 p36.33 Seq+ 37309 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-PNPLA1 KCTD20 chr6 36438034 + PNPLA1 chr6 36259097 + Exonic hg19 LUSC TCGA-77-8156 4 25 In-Frame Intra-chr p21.31 p21.31 Seq+ 37310 ChimerSeq STARFusion TCGA_RNA-Seq EIF2S2-IGH@ EIF2S2 chr20 32677240 - IGH@ chr14 106330471 - Exonic hg19 LUSC TCGA-77-8156 5 1 Out-of-frame Inter-chr q11.22 32.33 37311 ChimerSeq STARFusion TCGA_RNA-Seq EIF2S2-IGH@ EIF2S2 chr20 32677240 - IGH@ chr14 106330070 - Exonic hg19 LUSC TCGA-77-8156 4 1 Out-of-frame Inter-chr q11.22 32.33 37312 ChimerSeq STARFusion TCGA_RNA-Seq EPN1-U2AF2 EPN1 chr19 56190221 + U2AF2 chr19 56185300 + Exonic hg19 LUSC TCGA-33-4547 56 352 In-Frame Intra-chr q13.42 q13.42 Seq+ 37313 ChimerSeq STARFusion TCGA_RNA-Seq U2AF2-NLRP9 U2AF2 chr19 56181058 + NLRP9 chr19 56220410 - Exonic hg19 LUSC TCGA-33-4547 82 226 Out-of-frame Intra-chr q13.42 q13.42 Seq+ 37314 ChimerSeq STARFusion TCGA_RNA-Seq LINC00969-RAD51B LINC00969 chr3 195395512 + RAD51B chr14 69061202 + Exonic hg19 LUSC TCGA-33-4547 7 28 Out-of-frame Inter-chr q24.1 37315 ChimerSeq STARFusion TCGA_RNA-Seq SDHAP2-RAD51B SDHAP2 chr3 195395512 + RAD51B chr14 69061202 + Exonic hg19 LUSC TCGA-33-4547 7 28 5'UTR-CDS Inter-chr q24.1 37316 ChimerSeq STARFusion TCGA_RNA-Seq LINC00969-RAD51B LINC00969 chr3 195395512 + RAD51B chr14 69077723 + Exonic hg19 LUSC TCGA-33-4547 4 28 Out-of-frame Inter-chr q24.1 37317 ChimerSeq STARFusion TCGA_RNA-Seq SDHAP2-RAD51B SDHAP2 chr3 195395512 + RAD51B chr14 69077723 + Exonic hg19 LUSC TCGA-33-4547 4 28 5'UTR-3'UTR Inter-chr q24.1 37318 ChimerSeq STARFusion TCGA_RNA-Seq NRF1-MTMR1 NRF1 chr7 129251665 + MTMR1 chrX 149919202 + Exonic hg19 LUSC TCGA-33-4547 5 21 5'UTR-CDS Inter-chr q32.2 Tumor suppressor gene Transcription factor q28 Seq+ 37319 ChimerSeq STARFusion TCGA_RNA-Seq SOX11-IGH@ SOX11 chr2 5833429 + IGH@ chr14 106330467 - Exonic hg19 LUSC TCGA-33-4547 8 2 Out-of-frame Inter-chr p25.2 Oncogene Tumor suppressor gene Transcription factor 32.33 37320 ChimerSeq STARFusion TCGA_RNA-Seq SOX11-IGHG3 SOX11 chr2 5833429 + IGHG3 chr14 106330467 - Exonic hg19 LUSC TCGA-33-4547 8 1 Out-of-frame Inter-chr p25.2 Oncogene Tumor suppressor gene Transcription factor 37321 ChimerSeq STARFusion TCGA_RNA-Seq NRF1-MTMR1 NRF1 chr7 129270009 + MTMR1 chrX 149919202 + Exonic hg19 LUSC TCGA-33-4547 2 21 5'UTR-CDS Inter-chr q32.2 Tumor suppressor gene Transcription factor q28 Seq+ 37322 ChimerSeq STARFusion TCGA_RNA-Seq PPRC1-IGKC PPRC1 chr10 103901438 + IGKC chr2 89157198 - Exonic hg19 LUSC TCGA-33-4547 7 1 Out-of-frame Inter-chr q24.32 p11.2 37323 ChimerSeq STARFusion TCGA_RNA-Seq TMEM127-IGL@ TMEM127 chr2 96914668 - IGL@ chr22 23247171 + Exonic hg19 LUSC TCGA-33-4547 7 1 Out-of-frame Inter-chr q11.2 Tumor suppressor gene q11.22 37324 ChimerSeq STARFusion TCGA_RNA-Seq RNF217-TPD52L1 RNF217 chr6 125398004 + TPD52L1 chr6 125541224 + Exonic hg19 LUSC TCGA-33-4547 3 9 In-Frame Intra-chr q22.31 q22.31 37325 ChimerSeq STARFusion TCGA_RNA-Seq INCENP-CCS INCENP chr11 61908516 + CCS chr11 66372810 + Exonic hg19 LUSC TCGA-77-8153 12 64 In-Frame Intra-chr q12.3 q13.2 Seq+ 37326 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-MAPRE1 NIPBL chr5 36877280 + MAPRE1 chr20 31413731 + Exonic hg19 LUSC TCGA-77-8153 14 52 5'UTR-5'UTR Inter-chr p13.2 q11.21 Seq+ 37327 ChimerSeq STARFusion TCGA_RNA-Seq INCENP-CCS INCENP chr11 61908983 + CCS chr11 66372810 + Exonic hg19 LUSC TCGA-77-8153 8 63 In-Frame Intra-chr q12.3 q13.2 Seq+ 37328 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0368-PTGR1 KIAA0368 chr9 114202652 - PTGR1 chr9 114325511 - Exonic hg19 LUSC TCGA-77-8153 5 54 Out-of-frame Intra-chr q31.3 q31.3 37329 ChimerSeq STARFusion TCGA_RNA-Seq NDUFS6-C7 NDUFS6 chr5 1802488 + C7 chr5 40928682 + Exonic hg19 LUSC TCGA-77-8153 3 12 In-Frame Intra-chr p15.33 p13.1 Tumor suppressor gene Seq+ 37330 ChimerSeq STARFusion TCGA_RNA-Seq MXI1-ADD3 MXI1 chr10 111988079 + ADD3 chr10 111878345 + Exonic hg19 LUSC TCGA-77-8153 2 4 Out-of-frame Intra-chr q25.2 Tumor suppressor gene Transcription factor q25.1 Seq+ 37331 ChimerSeq STARFusion TCGA_RNA-Seq SFTPC-KCNJ15 SFTPC chr8 22020718 + KCNJ15 chr21 39676842 + Exonic hg19 LUSC TCGA-43-3394 18 1 Out-of-frame Inter-chr p21.3 q22.13 37332 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-RBFOX2 PPFIA1 chr11 70118542 + RBFOX2 chr22 36164396 - Exonic hg19 LUSC TCGA-85-A4QQ 17 124 In-Frame Inter-chr q13.3 Seq+ 37333 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-RBFOX2 PPFIA1 chr11 70118542 + RBFOX2 chr22 36161530 - Exonic hg19 LUSC TCGA-85-A4QQ 2 113 In-Frame Inter-chr q13.3 Seq+ 37334 ChimerSeq STARFusion TCGA_RNA-Seq UBE2D2-ARHGAP26 UBE2D2 chr5 138994551 + ARHGAP26 chr5 142434004 + Exonic hg19 LUSC TCGA-85-A4QQ 3 22 In-Frame Intra-chr q31.2 q31.3 Seq+ 37335 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KA3-FAM156A RPS6KA3 chrX 20284682 - FAM156A chrX 52985953 - Exonic hg19 LUSC TCGA-NK-A5D1 3 28 CDS-5'UTR Intra-chr p22.12 p11.22 37336 ChimerSeq STARFusion TCGA_RNA-Seq ZNF286A-VASP ZNF286A chr17 15604554 + VASP chr19 46026902 + Exonic hg19 LUSC TCGA-NK-A5D1 2 11 Out-of-frame Inter-chr p12 Transcription factor q13.32 37337 ChimerSeq STARFusion TCGA_RNA-Seq ZNF286A-VASP ZNF286A chr17 15604554 + VASP chr19 46026902 + Exonic hg19 LUSC TCGA-NK-A5D1 2 11 Out-of-frame Inter-chr p12 Transcription factor q13.32 37338 ChimerSeq STARFusion TCGA_RNA-Seq NUP85-NR5A2 NUP85 chr17 73201889 + NR5A2 chr1 200080330 + Exonic hg19 LUSC TCGA-NK-A5D1 2 8 In-Frame Inter-chr q25.1 q32.1 Transcription factor Seq+ 37339 ChimerSeq STARFusion TCGA_RNA-Seq CLPTM1-OPA3 CLPTM1 chr19 45465332 + OPA3 chr19 46057169 - Exonic hg19 LUSC TCGA-NK-A5D1 2 3 Out-of-frame Intra-chr q13.32 q13.32 Seq+ 37340 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G1-ECE2 EIF4G1 chr3 184039450 + ECE2 chr3 184008185 + Exonic hg19 LUSC TCGA-43-7656 3 287 Out-of-frame Intra-chr q27.1 q27.1 Seq+ 37341 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-IGHGP DHRSX chrX 2184830 - IGHGP chr14 106136184 - Exonic hg19 LUSC TCGA-43-7656 52 1 Out-of-frame Inter-chr p22.33 37342 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGH@ HOMER2 chr15 83561493 - IGH@ chr14 106111129 - Exonic hg19 LUSC TCGA-43-7656 8 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene 32.33 37343 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGHG1 HOMER2 chr15 83561493 - IGHG1 chr14 106209410 - Exonic hg19 LUSC TCGA-43-7656 8 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene q32.33 37344 ChimerSeq STARFusion TCGA_RNA-Seq ARPC2-IGH@ ARPC2 chr2 219093532 + IGH@ chr14 106136184 - Exonic hg19 LUSC TCGA-43-7656 6 3 Out-of-frame Inter-chr q35 32.33 37345 ChimerSeq STARFusion TCGA_RNA-Seq ARPC2-IGHG1 ARPC2 chr2 219093532 + IGHG1 chr14 106209410 - Exonic hg19 LUSC TCGA-43-7656 6 3 Out-of-frame Inter-chr q35 q32.33 37346 ChimerSeq STARFusion TCGA_RNA-Seq ARPC2-IGH@ ARPC2 chr2 219093532 + IGH@ chr14 106237745 - Exonic hg19 LUSC TCGA-43-7656 5 3 Out-of-frame Inter-chr q35 32.33 37347 ChimerSeq STARFusion TCGA_RNA-Seq ARPC2-IGHG1 ARPC2 chr2 219093532 + IGHG1 chr14 106237745 - Exonic hg19 LUSC TCGA-43-7656 5 3 Out-of-frame Inter-chr q35 q32.33 37348 ChimerSeq STARFusion TCGA_RNA-Seq RBM38-FRMD4B RBM38 chr20 55968389 + FRMD4B chr3 69267530 - Exonic hg19 LUSC TCGA-L3-A524 139 847 In-Frame Inter-chr q13.31 Tumor suppressor gene p14.1 Seq+ 37349 ChimerSeq STARFusion TCGA_RNA-Seq HEXA-BBS4 HEXA chr15 72668061 - BBS4 chr15 73002041 + Exonic hg19 LUSC TCGA-L3-A524 54 742 In-Frame Intra-chr q23 q24.1 Seq+ 37350 ChimerSeq STARFusion TCGA_RNA-Seq HEXA-BBS4 HEXA chr15 72668061 - BBS4 chr15 72987518 + Exonic hg19 LUSC TCGA-L3-A524 52 742 Out-of-frame Intra-chr q23 q24.1 Seq+ 37351 ChimerSeq STARFusion TCGA_RNA-Seq HEXA-BBS4 HEXA chr15 72668061 - BBS4 chr15 72978035 + Exonic hg19 LUSC TCGA-L3-A524 8 742 CDS-5'UTR Intra-chr q23 q24.1 Seq+ 37352 ChimerSeq STARFusion TCGA_RNA-Seq CCAT1-CASC8 CCAT1 chr8 128231055 - CASC8 chr8 128302305 - Exonic hg19 LUSC TCGA-L3-A524 15 130 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 37353 ChimerSeq STARFusion TCGA_RNA-Seq CCAT1-CASC8 CCAT1 chr8 128231055 - CASC8 chr8 128335399 - Exonic hg19 LUSC TCGA-L3-A524 13 130 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 37354 ChimerSeq STARFusion TCGA_RNA-Seq F11R-PFDN2 F11R chr1 160968617 - PFDN2 chr1 161072165 - Exonic hg19 LUSC TCGA-L3-A524 9 113 3'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 37355 ChimerSeq STARFusion TCGA_RNA-Seq PLXNC1-CRADD PLXNC1 chr12 94659001 + CRADD chr12 94243746 + Exonic hg19 LUSC TCGA-L3-A524 19 67 Out-of-frame Intra-chr q22 Tumor suppressor gene q22 Seq+ 37356 ChimerSeq STARFusion TCGA_RNA-Seq PITPNB-TANGO2 PITPNB chr22 28254375 - TANGO2 chr22 20024283 + Exonic hg19 LUSC TCGA-L3-A524 21 42 Out-of-frame Intra-chr q12.1 q11.21 Seq+ 37357 ChimerSeq STARFusion TCGA_RNA-Seq F11R-PFDN2 F11R chr1 160967196 - PFDN2 chr1 161072165 - Exonic hg19 LUSC TCGA-L3-A524 3 112 3'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 37358 ChimerSeq STARFusion TCGA_RNA-Seq UBE2K-LIAS UBE2K chr4 39739131 + LIAS chr4 39471637 + Exonic hg19 LUSC TCGA-L3-A524 13 52 Out-of-frame Intra-chr p14 p14 Seq+ 37359 ChimerSeq STARFusion TCGA_RNA-Seq TMEM25-CD3G TMEM25 chr11 118404844 + CD3G chr11 118220458 + Exonic hg19 LUSC TCGA-L3-A524 10 50 In-Frame Intra-chr q23.3 q23.3 Seq+ 37360 ChimerSeq STARFusion TCGA_RNA-Seq EPS8-MED21 EPS8 chr12 15942095 - MED21 chr12 27199087 + Exonic hg19 LUSC TCGA-L3-A524 9 50 5'UTR-3'UTR Intra-chr p12.3 p11.23 Seq+ 37361 ChimerSeq STARFusion TCGA_RNA-Seq EPS8-MED21 EPS8 chr12 15942095 - MED21 chr12 27199091 + Exonic hg19 LUSC TCGA-L3-A524 6 49 5'UTR-3'UTR Intra-chr p12.3 p11.23 Seq+ 37362 ChimerSeq STARFusion TCGA_RNA-Seq UBE2K-LIAS UBE2K chr4 39739133 + LIAS chr4 39471639 + Exonic hg19 LUSC TCGA-L3-A524 5 49 Out-of-frame Intra-chr p14 p14 Seq+ 37363 ChimerSeq STARFusion TCGA_RNA-Seq KAT2A-RAB43 KAT2A chr17 40265671 - RAB43 chr3 128814012 - Exonic hg19 LUSC TCGA-L3-A524 7 35 In-Frame Inter-chr q21.2 q21.3 37364 ChimerSeq STARFusion TCGA_RNA-Seq MSI2-SYNPO2 MSI2 chr17 55478832 + SYNPO2 chr4 119944585 + Exonic hg19 LUSC TCGA-L3-A524 5 23 In-Frame Inter-chr q22 q26 Tumor suppressor gene Seq+ 37365 ChimerSeq STARFusion TCGA_RNA-Seq ASH1L-GON4L ASH1L chr1 155531944 - GON4L chr1 155786053 - Exonic hg19 LUSC TCGA-L3-A524 4 20 5'UTR-CDS Intra-chr q22 Transcription factor q22 Seq+ 37366 ChimerSeq STARFusion TCGA_RNA-Seq RBM6-FAM212A RBM6 chr3 49977658 + FAM212A chr3 49841614 + Exonic hg19 LUSC TCGA-L3-A524 5 11 5'UTR-CDS Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 37367 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB25-TPRG1 ZBTB25 chr14 64970379 - TPRG1 chr3 188956522 + Exonic hg19 LUSC TCGA-L3-A524 2 21 5'UTR-CDS Inter-chr q23.3 Transcription factor q28 Seq+ 37368 ChimerSeq STARFusion TCGA_RNA-Seq CASC3-ERBB2 CASC3 chr17 38297860 + ERBB2 chr17 37844949 + Exonic hg19 LUSC TCGA-L3-A524 4 12 CDS-5'UTR Intra-chr q21.1 q12 Oncogene Seq+ 37369 ChimerSeq STARFusion TCGA_RNA-Seq RALGPS1-LMX1B RALGPS1 chr9 129728230 + LMX1B chr9 129453115 + Exonic hg19 LUSC TCGA-L3-A524 2 9 Out-of-frame Intra-chr q33.3 q33.3 Transcription factor Seq+ 37370 ChimerSeq STARFusion TCGA_RNA-Seq RALGAPB-CTCFL RALGAPB chr20 37168601 + CTCFL chr20 56094433 - Exonic hg19 LUSC TCGA-85-8664 7 14 Out-of-frame Intra-chr q11.23 q13.31 Tumor suppressor gene Transcription factor Seq+ 37371 ChimerSeq STARFusion TCGA_RNA-Seq SLC2A10-ACSS2 SLC2A10 chr20 45338379 + ACSS2 chr20 33500899 + Exonic hg19 LUSC TCGA-85-8664 6 14 Out-of-frame Intra-chr q13.12 q11.22 Seq+ 37372 ChimerSeq STARFusion TCGA_RNA-Seq BMP7-PIGU BMP7 chr20 55840761 - PIGU chr20 33176411 - Exonic hg19 LUSC TCGA-85-8664 4 11 Out-of-frame Intra-chr q13.31 q11.22 Seq+ 37373 ChimerSeq STARFusion TCGA_RNA-Seq SPAST-DPY30 SPAST chr2 32323960 + DPY30 chr2 32237121 - Exonic hg19 LUSC TCGA-85-8664 4 8 CDS-3'UTR Intra-chr p22.3 p22.3 37374 ChimerSeq STARFusion TCGA_RNA-Seq TMEM65-EXT1 TMEM65 chr8 125384095 - EXT1 chr8 118849440 - Exonic hg19 LUSC TCGA-85-8664 4 5 Out-of-frame Intra-chr q24.13 q24.11 Oncogene Tumor suppressor gene Seq+ 37375 ChimerSeq STARFusion TCGA_RNA-Seq SIRT1-DNAJC12 SIRT1 chr10 69651312 + DNAJC12 chr10 69583150 - Exonic hg19 LUSC TCGA-85-A50M 31 204 In-Frame Intra-chr q21.3 Tumor suppressor gene q21.3 Seq+ 37376 ChimerSeq STARFusion TCGA_RNA-Seq G3BP1-PCDH9 G3BP1 chr5 151166276 + PCDH9 chr13 66879160 - Exonic hg19 LUSC TCGA-85-A50M 30 106 Out-of-frame Inter-chr q33.1 q21.32 Tumor suppressor gene Seq+ 37377 ChimerSeq STARFusion TCGA_RNA-Seq NSD1-C11orf58 NSD1 chr5 176666866 + C11orf58 chr11 16766148 + Exonic hg19 LUSC TCGA-85-A50M 25 116 In-Frame Inter-chr q35.3 Oncogene p15.2 Seq+ 37378 ChimerSeq STARFusion TCGA_RNA-Seq SDHAF2-FNBP4 SDHAF2 chr11 61197654 + FNBP4 chr11 47744868 - Exonic hg19 LUSC TCGA-85-A50M 15 39 Out-of-frame Intra-chr q12.2 p11.2 Seq+ 37379 ChimerSeq STARFusion TCGA_RNA-Seq SDHAF2-FNBP4 SDHAF2 chr11 61197654 + FNBP4 chr11 47741638 - Exonic hg19 LUSC TCGA-85-A50M 7 39 In-Frame Intra-chr q12.2 p11.2 Seq+ 37380 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D22A-FBLN1 TBC1D22A chr22 47193517 + FBLN1 chr22 45946372 + Exonic hg19 LUSC TCGA-85-A50M 7 31 In-Frame Intra-chr q13.31 q13.31 Tumor suppressor gene Seq+ 37381 ChimerSeq STARFusion TCGA_RNA-Seq NOL6-SUGT1P NOL6 chr9 33473787 - SUGT1P chr9 33510709 - Exonic hg19 LUSC TCGA-85-A50M 6 25 Out-of-frame Intra-chr p13.3 37382 ChimerSeq STARFusion TCGA_RNA-Seq LDLRAD3-SNCB LDLRAD3 chr11 36120011 + SNCB chr5 176053762 - Exonic hg19 LUSC TCGA-85-A50M 4 31 In-Frame Inter-chr p13 q35.2 Seq+ 37383 ChimerSeq STARFusion TCGA_RNA-Seq ALDH2-LRBA ALDH2 chr12 112237867 + LRBA chr4 151793907 - Exonic hg19 LUSC TCGA-85-A50Z 2 6 In-Frame Inter-chr q24.12 q31.3 Seq+ 37384 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ATP1A1 IGH@ chr14 106757651 - ATP1A1 chr1 116932062 + Exonic hg19 LUSC TCGA-98-7454 60 10 Out-of-frame Inter-chr 32.33 p13.1 37385 ChimerSeq STARFusion TCGA_RNA-Seq ACAT2-IGHG1 ACAT2 chr6 160183155 + IGHG1 chr14 106209411 - Exonic hg19 LUSC TCGA-98-7454 60 1 Out-of-frame Inter-chr q25.3 q32.33 37386 ChimerSeq STARFusion TCGA_RNA-Seq ACAT2-IGHG1 ACAT2 chr6 160183157 + IGHG1 chr14 106237744 - Exonic hg19 LUSC TCGA-98-7454 48 1 Out-of-frame Inter-chr q25.3 q32.33 37387 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-IGHG4 DHRSX chrY 2134825 - IGHG4 chr14 106111124 - Exonic hg19 LUSC TCGA-98-7454 23 1 Out-of-frame Inter-chr p22.33 37388 ChimerSeq STARFusion TCGA_RNA-Seq DIP2B-IGKC DIP2B chr12 51084877 + IGKC chr2 89161074 - Exonic hg19 LUSC TCGA-98-7454 21 1 Out-of-frame Inter-chr q13.12 p11.2 37389 ChimerSeq STARFusion TCGA_RNA-Seq RBM4-IGHG3 RBM4 chr11 66406301 + IGHG3 chr14 106330461 - Exonic hg19 LUSC TCGA-98-7454 21 1 Out-of-frame Inter-chr q13.2 Tumor suppressor gene 37390 ChimerSeq STARFusion TCGA_RNA-Seq VCL-ADK VCL chr10 75758133 + ADK chr10 76349040 + Exonic hg19 LUSC TCGA-98-7454 6 31 In-Frame Intra-chr q22.2 q22.2 Seq+ 37391 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-IGHG3 TMEM123 chr11 102323448 - IGHG3 chr14 106330461 - Exonic hg19 LUSC TCGA-98-7454 13 2 Out-of-frame Inter-chr q22.2 37392 ChimerSeq STARFusion TCGA_RNA-Seq NPIPP1-GAREM NPIPP1 chr16 15208300 - GAREM chr18 29972998 - Exonic hg19 LUSC TCGA-85-8582 12 13 Out-of-frame Inter-chr p13.11 37393 ChimerSeq STARFusion TCGA_RNA-Seq PDXK-EYS PDXK chr21 45175935 + EYS chr6 65016975 - Exonic hg19 LUSC TCGA-85-8582 4 31 Out-of-frame Inter-chr q22.3 q12 Seq+ 37394 ChimerSeq STARFusion TCGA_RNA-Seq PDXDC1-NAV2 PDXDC1 chr16 15069077 + NAV2 chr11 19854030 + Exonic hg19 LUSC TCGA-85-8582 4 30 In-Frame Inter-chr p13.11 p15.1 Seq+ 37395 ChimerSeq STARFusion TCGA_RNA-Seq PDXK-EYS PDXK chr21 45175976 + EYS chr6 65016975 - Exonic hg19 LUSC TCGA-85-8582 3 31 3'UTR-CDS Inter-chr q22.3 q12 Seq+ 37396 ChimerSeq STARFusion TCGA_RNA-Seq SLC43A2-IGH@ SLC43A2 chr17 1477575 - IGH@ chr14 106330072 - Exonic hg19 LUSC TCGA-85-8582 7 2 Out-of-frame Inter-chr 32.33 37397 ChimerSeq STARFusion TCGA_RNA-Seq SLC43A2-IGHG3 SLC43A2 chr17 1477575 - IGHG3 chr14 106330072 - Exonic hg19 LUSC TCGA-85-8582 7 1 Out-of-frame Inter-chr 37398 ChimerSeq STARFusion TCGA_RNA-Seq NPIPP1-GAREM NPIPP1 chr16 15212783 - GAREM chr18 29972998 - Exonic hg19 LUSC TCGA-85-8582 5 7 Out-of-frame Inter-chr p13.11 37399 ChimerSeq STARFusion TCGA_RNA-Seq RBM3-COL1A1 RBM3 chrX 48434090 + COL1A1 chr17 48264909 - Exonic hg19 LUSC TCGA-85-8582 6 1 Out-of-frame Inter-chr p11.23 q21.33 Oncogene 37400 ChimerSeq STARFusion TCGA_RNA-Seq PKD1P6-GAREM PKD1P6 chr16 15208300 - GAREM chr18 29972998 - Exonic hg19 LUSC TCGA-85-8582 3 10 Out-of-frame Inter-chr p13.11 37401 ChimerSeq STARFusion TCGA_RNA-Seq AHNAK2-IGKC AHNAK2 chr14 105413998 - IGKC chr2 89157195 - Exonic hg19 LUSC TCGA-85-8582 4 3 Out-of-frame Inter-chr q32.33 p11.2 37402 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-TEKT4P2 KDM2A chr11 66888829 + TEKT4P2 chr21 9909277 - Exonic hg19 LUSC TCGA-85-8582 2 11 CDS-3'UTR Inter-chr q13.2 Transcription factor p11.2 Seq+ 37403 ChimerSeq STARFusion TCGA_RNA-Seq SLC43A2-IGH@ SLC43A2 chr17 1477570 - IGH@ chr14 106330468 - Exonic hg19 LUSC TCGA-85-8582 4 2 Out-of-frame Inter-chr 32.33 37404 ChimerSeq STARFusion TCGA_RNA-Seq SLC43A2-IGHG3 SLC43A2 chr17 1477570 - IGHG3 chr14 106330468 - Exonic hg19 LUSC TCGA-85-8582 4 1 Out-of-frame Inter-chr 37405 ChimerSeq STARFusion TCGA_RNA-Seq PIGK-TGFBR3 PIGK chr1 77587960 - TGFBR3 chr1 92187701 - Exonic hg19 LUSC TCGA-85-8582 3 3 In-Frame Intra-chr p31.1 p22.1 Tumor suppressor gene Seq+ 37406 ChimerSeq STARFusion TCGA_RNA-Seq SLC43A2-IGH@ SLC43A2 chr17 1477577 - IGH@ chr14 106330475 - Exonic hg19 LUSC TCGA-85-8582 3 2 Out-of-frame Inter-chr 32.33 37407 ChimerSeq STARFusion TCGA_RNA-Seq FXR1-MCCC1 FXR1 chr3 180630524 + MCCC1 chr3 182790275 - Exonic hg19 LUSC TCGA-85-8580 85 101 In-Frame Intra-chr q26.33 q27.1 Seq+ 37408 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-AHDC1 WASF2 chr1 27816497 - AHDC1 chr1 27885394 - Exonic hg19 LUSC TCGA-85-8580 7 52 5'UTR-5'UTR Intra-chr p36.11 p35.3 Transcription factor Seq+ 37409 ChimerSeq STARFusion TCGA_RNA-Seq RBM10-ERAS RBM10 chrX 47006897 + ERAS chrX 48687491 + Exonic hg19 LUSC TCGA-85-8580 5 38 CDS-5'UTR Intra-chr p11.3 p11.23 Seq+ 37410 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0907-ARHGEF2 KIAA0907 chr1 155891166 - ARHGEF2 chr1 155939091 - Exonic hg19 LUSC TCGA-85-8580 7 7 In-Frame Intra-chr q22 q22 Seq+ 37411 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G3-ECE1 EIF4G3 chr1 21377359 - ECE1 chr1 21586885 - Exonic hg19 LUSC TCGA-85-8580 5 13 5'UTR-CDS Intra-chr p36.12 p36.12 Seq+ 37412 ChimerSeq STARFusion TCGA_RNA-Seq MYH11-FOPNL MYH11 chr16 15950798 - FOPNL chr16 15978062 - Exonic hg19 LUSC TCGA-85-8580 3 11 5'UTR-CDS Intra-chr Oncogene p13.11 37413 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1551-ITPR2 KIAA1551 chr12 32113805 + ITPR2 chr12 26540527 - Exonic hg19 LUSC TCGA-85-8584 5 61 Out-of-frame Intra-chr p11.21 p11.23 Seq+ 37414 ChimerSeq STARFusion TCGA_RNA-Seq SPSB2-DYRK4 SPSB2 chr12 6981439 - DYRK4 chr12 4671420 + Exonic hg19 LUSC TCGA-85-8584 8 18 Out-of-frame Intra-chr p13.31 p13.32 CMGC:DYRK Seq+ 37415 ChimerSeq STARFusion TCGA_RNA-Seq PC-KDM2A PC chr11 66719901 - KDM2A chr11 67012660 + Exonic hg19 LUSC TCGA-85-8584 4 31 5'UTR-5'UTR Intra-chr q13.2 q13.2 Transcription factor Seq+ 37416 ChimerSeq STARFusion TCGA_RNA-Seq PPRC1-IGKC PPRC1 chr10 103901438 + IGKC chr2 89157198 - Exonic hg19 LUSC TCGA-85-8584 10 2 Out-of-frame Inter-chr q24.32 p11.2 37417 ChimerSeq STARFusion TCGA_RNA-Seq HIST4H4-CLEC1A HIST4H4 chr12 14923613 - CLEC1A chr12 10234012 - Exonic hg19 LUSC TCGA-85-8584 2 21 3'UTR-CDS Intra-chr p12.3 p13.2 Seq+ 37418 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-RBM10 IGL@ chr22 22758825 + RBM10 chrX 47045696 + Exonic hg19 LUSC TCGA-85-8584 5 1 Out-of-frame Inter-chr q11.22 p11.3 37419 ChimerSeq STARFusion TCGA_RNA-Seq RPS14-IGH@ RPS14 chr5 149828778 - IGH@ chr14 106329449 - Exonic hg19 LUSC TCGA-85-8584 4 5 Out-of-frame Inter-chr q33.1 32.33 37420 ChimerSeq STARFusion TCGA_RNA-Seq RPS14-IGHG3 RPS14 chr5 149828778 - IGHG3 chr14 106329449 - Exonic hg19 LUSC TCGA-85-8584 4 2 Out-of-frame Inter-chr q33.1 37421 ChimerSeq STARFusion TCGA_RNA-Seq STYXL1-IGKC STYXL1 chr7 75633040 - IGKC chr2 89160434 - Exonic hg19 LUSC TCGA-85-8584 4 2 Out-of-frame Inter-chr q11.23 p11.2 37422 ChimerSeq STARFusion TCGA_RNA-Seq RAD51AP1-ATN1 RAD51AP1 chr12 4658002 + ATN1 chr12 7047008 + Exonic hg19 LUSC TCGA-85-8584 2 9 Out-of-frame Intra-chr p13.32 p13.31 Seq+ 37423 ChimerSeq STARFusion TCGA_RNA-Seq LRRC23-LPCAT3 LRRC23 chr12 7015826 + LPCAT3 chr12 7092700 - Exonic hg19 LUSC TCGA-85-8584 2 5 In-Frame Intra-chr p13.31 p13.31 Seq+ 37424 ChimerSeq STARFusion TCGA_RNA-Seq USP13-FXR1 USP13 chr3 179399791 + FXR1 chr3 180651122 + Exonic hg19 LUSC TCGA-85-8355 11 50 In-Frame Intra-chr q26.33 q26.33 Seq+ 37425 ChimerSeq STARFusion TCGA_RNA-Seq SBSPON-IGHGP SBSPON chr8 73993398 - IGHGP chr14 106134658 - Exonic hg19 LUSC TCGA-85-8355 17 0 Out-of-frame Inter-chr q21.11 Seq+ 37426 ChimerSeq STARFusion TCGA_RNA-Seq USP13-FXR1 USP13 chr3 179371181 + FXR1 chr3 180651122 + Exonic hg19 LUSC TCGA-85-8355 2 46 In-Frame Intra-chr q26.33 q26.33 Seq+ 37427 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGHG3 INTS1 chr7 1511982 - IGHG3 chr14 106237746 - Exonic hg19 LUSC TCGA-85-8355 6 1 Out-of-frame Inter-chr p22.3 37428 ChimerSeq STARFusion TCGA_RNA-Seq FAF1-OSBPL9 FAF1 chr1 51425439 - OSBPL9 chr1 52231494 + Exonic hg19 LUSC TCGA-85-8355 2 13 Out-of-frame Intra-chr p32.3 p32.3 Seq+ 37429 ChimerSeq STARFusion TCGA_RNA-Seq SFT2D2-SUCO SFT2D2 chr1 168208398 + SUCO chr1 172520652 + Exonic hg19 LUSC TCGA-43-2576 110 306 Out-of-frame Intra-chr q24.2 q24.3 Seq+ 37430 ChimerSeq STARFusion TCGA_RNA-Seq NBPF12-PDE4DIP NBPF12 chr1 146374323 + PDE4DIP chr1 144837885 - Exonic hg19 LUSC TCGA-43-2576 4 11 Out-of-frame Intra-chr q21.1 q21.2 Oncogene 37431 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF11-SMCP ARHGEF11 chr1 157014091 - SMCP chr1 152856879 + Exonic hg19 LUSC TCGA-43-2576 3 8 CDS-5'UTR Intra-chr q23.1 q21.3 Seq+ 37432 ChimerSeq STARFusion TCGA_RNA-Seq HS6ST3-EIF4EBP1 HS6ST3 chr13 96743823 + EIF4EBP1 chr8 37914599 + Exonic hg19 LUSC TCGA-43-2576 2 8 Out-of-frame Inter-chr q32.1 p11.23 Seq+ 37433 ChimerSeq STARFusion TCGA_RNA-Seq PCGF3-FANCI PCGF3 chr4 738476 + FANCI chr15 89856135 + Exonic hg19 LUSC TCGA-43-6770 194 321 In-Frame Inter-chr p16.3 q26.1 Seq+ 37434 ChimerSeq STARFusion TCGA_RNA-Seq RPAP3-ADAM32 RPAP3 chr12 48073276 - ADAM32 chr8 39141105 + Exonic hg19 LUSC TCGA-43-6770 7 48 Out-of-frame Inter-chr q13.11 Seq+ 37435 ChimerSeq STARFusion TCGA_RNA-Seq RPAP3-ADAM32 RPAP3 chr12 48073487 - ADAM32 chr8 39141105 + Exonic hg19 LUSC TCGA-43-6770 2 45 Out-of-frame Inter-chr q13.11 Seq+ 37436 ChimerSeq STARFusion TCGA_RNA-Seq SMAD3-OR4G3P SMAD3 chr15 67358698 + OR4G3P chr19 94892 + Exonic hg19 LUSC TCGA-43-6770 3 10 Out-of-frame Inter-chr q22.33 Transcription factor p13.3 37437 ChimerSeq STARFusion TCGA_RNA-Seq KRT16-COL1A2 KRT16 chr17 39768410 - COL1A2 chr7 94028361 + Exonic hg19 LUSC TCGA-21-1079 2 6 In-Frame Inter-chr q21.2 q21.3 37438 ChimerSeq STARFusion TCGA_RNA-Seq NPLOC4-P4HB NPLOC4 chr17 79596751 - P4HB chr17 79805223 - Exonic hg19 LUSC TCGA-21-1076 24 90 In-Frame Intra-chr q25.3 q25.3 Seq+ 37439 ChimerSeq STARFusion TCGA_RNA-Seq ADAM9-RNF170 ADAM9 chr8 38865502 + RNF170 chr8 42716998 - Exonic hg19 LUSC TCGA-21-1076 22 66 In-Frame Intra-chr p11.21 Seq+ 37440 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106111129 - Exonic hg19 LUSC TCGA-21-1076 34 1 Out-of-frame Inter-chr q37.3 37441 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106136184 - Exonic hg19 LUSC TCGA-21-1076 22 1 Out-of-frame Inter-chr q37.3 37442 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-IGH@ TPT1 chr13 45915218 - IGH@ chr14 106209410 - Exonic hg19 LUSC TCGA-21-1077 27 19 Out-of-frame Inter-chr q14.13 32.33 37443 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-IGHG1 TPT1 chr13 45915218 - IGHG1 chr14 106209410 - Exonic hg19 LUSC TCGA-21-1077 27 9 Out-of-frame Inter-chr q14.13 q32.33 37444 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-IGH@ TPT1 chr13 45915218 - IGH@ chr14 106111129 - Exonic hg19 LUSC TCGA-21-1077 25 16 Out-of-frame Inter-chr q14.13 32.33 37445 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-IGH@ TPT1 chr13 45915218 - IGH@ chr14 106136184 - Exonic hg19 LUSC TCGA-21-1077 24 17 Out-of-frame Inter-chr q14.13 32.33 37446 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-IGH@ TPT1 chr13 45915218 - IGH@ chr14 106237745 - Exonic hg19 LUSC TCGA-21-1077 23 16 Out-of-frame Inter-chr q14.13 32.33 37447 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3B-NAALADL2 FNDC3B chr3 171757561 + NAALADL2 chr3 174814580 + Exonic hg19 LUSC TCGA-21-1077 12 53 5'UTR-CDS Intra-chr q26.31 q26.31 Seq+ 37448 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-IGHG1 TPT1 chr13 45915218 - IGHG1 chr14 106237745 - Exonic hg19 LUSC TCGA-21-1077 22 9 Out-of-frame Inter-chr q14.13 q32.33 37449 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-IGH@ TPT1 chr13 45915218 - IGH@ chr14 106092405 - Exonic hg19 LUSC TCGA-21-1077 17 19 Out-of-frame Inter-chr q14.13 32.33 37450 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3B-NAALADL2 FNDC3B chr3 171758414 + NAALADL2 chr3 174814580 + Exonic hg19 LUSC TCGA-21-1077 2 53 5'UTR-CDS Intra-chr q26.31 q26.31 Seq+ 37451 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-PKM IGH@ chr14 106208231 - PKM chr15 72494079 - Exonic hg19 LUSC TCGA-21-1077 3 12 Out-of-frame Inter-chr 32.33 q23 37452 ChimerSeq STARFusion TCGA_RNA-Seq STK38L-SMCO2 STK38L chr12 27397265 + SMCO2 chr12 27627719 + Exonic hg19 LUSC TCGA-21-1072 7 5 Out-of-frame Intra-chr p11.23 p11.23 Seq+ 37453 ChimerSeq STARFusion TCGA_RNA-Seq EFTUD1-KHDRBS2 EFTUD1 chr15 82507058 - KHDRBS2 chr6 62390965 - Exonic hg19 LUSC TCGA-21-1072 2 15 In-Frame Inter-chr q11.1 Seq+ 37454 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-XIAP IGH@ chr14 106452666 - XIAP chrX 123044748 + Exonic hg19 LUSC TCGA-21-1070 26 2 Out-of-frame Inter-chr 32.33 q25 37455 ChimerSeq STARFusion TCGA_RNA-Seq PGAP1-NCKAP5 PGAP1 chr2 197791194 - NCKAP5 chr2 133430878 - Exonic hg19 LUSC TCGA-21-1070 3 15 Out-of-frame Intra-chr q33.1 q21.2 Seq+ 37456 ChimerSeq STARFusion TCGA_RNA-Seq YBX3-APOLD1 YBX3 chr12 10868293 - APOLD1 chr12 12982357 + Exonic hg19 LUSC TCGA-21-1070 3 15 Out-of-frame Intra-chr p13.2 Transcription factor p13.1 Seq+ 37457 ChimerSeq STARFusion TCGA_RNA-Seq YBX3-DDX47 YBX3 chr12 10868293 - DDX47 chr12 12982357 + Exonic hg19 LUSC TCGA-21-1070 3 15 Out-of-frame Intra-chr p13.2 Transcription factor p13.1 Seq+ 37458 ChimerSeq STARFusion TCGA_RNA-Seq CIDEB-IGH@ CIDEB chr14 24780422 - IGH@ chr14 106175005 - Exonic hg19 LUSC TCGA-21-1070 6 1 Out-of-frame Intra-chr q12 32.33 37459 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525072 - IGHG1 chr14 106209410 - Exonic hg19 LUSC TCGA-21-1070 5 2 Out-of-frame Inter-chr q34 Oncogene q32.33 37460 ChimerSeq STARFusion TCGA_RNA-Seq CFL1-IGKC CFL1 chr11 65625110 - IGKC chr2 89160433 - Exonic hg19 LUSC TCGA-21-1070 4 3 Out-of-frame Inter-chr q13.1 p11.2 37461 ChimerSeq STARFusion TCGA_RNA-Seq SENP2-ANKRD27 SENP2 chr3 185304302 + ANKRD27 chr19 33133051 - Exonic hg19 LUSC TCGA-21-1071 7 15 In-Frame Inter-chr q27.2 q13.11 Seq+ 37462 ChimerSeq STARFusion TCGA_RNA-Seq AP2A2-EPS8L2 AP2A2 chr11 994245 + EPS8L2 chr11 720062 + Exonic hg19 LUSC TCGA-21-1071 3 16 In-Frame Intra-chr p15.5 p15.5 Seq+ 37463 ChimerSeq STARFusion TCGA_RNA-Seq KLHL24-CEP89 KLHL24 chr3 183381430 + CEP89 chr19 33392318 - Exonic hg19 LUSC TCGA-21-1071 3 16 Out-of-frame Inter-chr q27.1 q13.11 Seq+ 37464 ChimerSeq STARFusion TCGA_RNA-Seq KLHL24-CEP89 KLHL24 chr3 183369064 + CEP89 chr19 33392318 - Exonic hg19 LUSC TCGA-21-1071 3 16 In-Frame Inter-chr q27.1 q13.11 Seq+ 37465 ChimerSeq STARFusion TCGA_RNA-Seq FBXW2-MEGF9 FBXW2 chr9 123533626 - MEGF9 chr9 123421853 - Exonic hg19 LUSC TCGA-21-1071 3 15 Out-of-frame Intra-chr q33.2 q33.2 Seq+ 37466 ChimerSeq STARFusion TCGA_RNA-Seq SENP2-ANKRD27 SENP2 chr3 185304302 + ANKRD27 chr19 33134105 - Exonic hg19 LUSC TCGA-21-1071 2 15 Out-of-frame Inter-chr q27.2 q13.11 Seq+ 37467 ChimerSeq STARFusion TCGA_RNA-Seq SLC47A2-FADS2 SLC47A2 chr17 19605918 - FADS2 chr11 61624483 + Exonic hg19 LUSC TCGA-21-1071 4 6 In-Frame Inter-chr p11.2 q12.2 Seq+ 37468 ChimerSeq STARFusion TCGA_RNA-Seq C19orf54-ITPKC C19orf54 chr19 41247659 - ITPKC chr19 41245885 + Exonic hg19 LUSC TCGA-21-1071 4 4 Out-of-frame Intra-chr q13.2 q13.2 37469 ChimerSeq STARFusion TCGA_RNA-Seq NF1-SLC46A1 NF1 chr17 29509683 + SLC46A1 chr17 26733015 - Exonic hg19 LUSC TCGA-22-5482 3 16 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 37470 ChimerSeq STARFusion TCGA_RNA-Seq LRP1B-HECW2 LRP1B chr2 142567848 - HECW2 chr2 197208488 - Exonic hg19 LUSC TCGA-22-5482 2 11 In-Frame Intra-chr q22.2 Oncogene Tumor suppressor gene q32.3 Seq+ 37471 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SNRPD3 IGH@ chr14 107083255 - SNRPD3 chr22 24977925 + Exonic hg19 LUSC TCGA-22-5483 29 1 Out-of-frame Inter-chr 32.33 q11.23 37472 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SNRPD3 IGH@ chr14 107095126 - SNRPD3 chr22 24977924 + Exonic hg19 LUSC TCGA-22-5483 20 1 Out-of-frame Inter-chr 32.33 q11.23 37473 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SNRPD3 IGH@ chr14 107062128 - SNRPD3 chr22 24977924 + Exonic hg19 LUSC TCGA-22-5483 18 1 Out-of-frame Inter-chr 32.33 q11.23 37474 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1 FTL chr19 49469663 + FTH1 chr11 61732363 - Exonic hg19 LUSC TCGA-22-5483 2 62 In-Frame Inter-chr q13.33 q12.3 37475 ChimerSeq STARFusion TCGA_RNA-Seq COL1A1-IGH@ COL1A1 chr17 48262811 - IGH@ chr14 106208514 - Exonic hg19 LUSC TCGA-22-5483 3 50 Out-of-frame Inter-chr q21.33 Oncogene 32.33 37476 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SNRPD3 IGH@ chr14 106478110 - SNRPD3 chr22 24977924 + Exonic hg19 LUSC TCGA-22-5483 15 1 Out-of-frame Inter-chr 32.33 q11.23 37477 ChimerSeq STARFusion TCGA_RNA-Seq EIF5B-C2orf15 EIF5B chr2 99954052 + C2orf15 chr2 99937589 + Exonic hg19 LUSC TCGA-22-5483 4 37 CDS-3'UTR Intra-chr q11.2 q11.2 37478 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SNRPD3 IGH@ chr14 107048671 - SNRPD3 chr22 24977925 + Exonic hg19 LUSC TCGA-22-5483 13 1 Out-of-frame Inter-chr 32.33 q11.23 37479 ChimerSeq STARFusion TCGA_RNA-Seq EIF5B-C2orf15 EIF5B chr2 99954052 + C2orf15 chr2 99923852 + Exonic hg19 LUSC TCGA-22-5483 3 31 CDS-3'UTR Intra-chr q11.2 q11.2 37480 ChimerSeq STARFusion TCGA_RNA-Seq COL1A1-IGHG1 COL1A1 chr17 48262811 - IGHG1 chr14 106208514 - Exonic hg19 LUSC TCGA-22-5483 3 26 Out-of-frame Inter-chr q21.33 Oncogene q32.33 37481 ChimerSeq STARFusion TCGA_RNA-Seq ALG1-SEC14L5 ALG1 chr16 5125537 + SEC14L5 chr16 5064860 + Exonic hg19 LUSC TCGA-22-5483 2 13 In-Frame Intra-chr p13.3 p13.3 Seq+ 37482 ChimerSeq STARFusion TCGA_RNA-Seq BAG4-FGFR1 BAG4 chr8 38050313 + FGFR1 chr8 38283763 - Exonic hg19 LUSC TCGA-22-5480 8 62 In-Frame Intra-chr p11.23 p11.23 TK:FGFR Oncogene KB Pub Seq+ 37483 ChimerSeq STARFusion TCGA_RNA-Seq CUX1-AHCYL2 CUX1 chr7 101459373 + AHCYL2 chr7 129019482 + Exonic hg19 LUSC TCGA-22-5480 5 30 In-Frame Intra-chr q22.1 Tumor suppressor gene Transcription factor q32.1 Seq+ 37484 ChimerSeq STARFusion TCGA_RNA-Seq C9orf96-DBH C9orf96 chr9 136245993 + DBH chr9 136516756 + Exonic hg19 LUSC TCGA-22-5480 6 25 In-Frame Intra-chr q34.2 37485 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 LUSC TCGA-22-5480 2 10 CDS-5'UTR Intra-chr q23 Seq+ 37486 ChimerSeq STARFusion TCGA_RNA-Seq MANBA-LIMCH1 MANBA chr4 103681875 - LIMCH1 chr4 41600937 + Exonic hg19 LUSC TCGA-22-5481 6 26 In-Frame Intra-chr q24 p13 Seq+ 37487 ChimerSeq STARFusion TCGA_RNA-Seq TNRC18-ACTB TNRC18 chr7 5410006 - ACTB chr7 5569294 - Exonic hg19 LUSC TCGA-22-5481 10 9 CDS-3'UTR Intra-chr p22.1 p22.1 Seq+ 37488 ChimerSeq STARFusion TCGA_RNA-Seq IGSF11-IGKC IGSF11 chr3 118647517 - IGKC chr2 89161429 - Exonic hg19 LUSC TCGA-22-5481 11 0 Out-of-frame Inter-chr q13.32 p11.2 37489 ChimerSeq STARFusion TCGA_RNA-Seq IGSF11-IGKJ1 IGSF11 chr3 118647517 - IGKJ1 chr2 89161429 - Exonic hg19 LUSC TCGA-22-5481 11 0 Out-of-frame Inter-chr q13.32 p11.2 Seq+ 37490 ChimerSeq STARFusion TCGA_RNA-Seq MPHOSPH9-CDC6 MPHOSPH9 chr12 123717622 - CDC6 chr17 38447721 + Exonic hg19 LUSC TCGA-22-5481 3 21 5'UTR-3'UTR Inter-chr q24.31 q21.2 Seq+ 37491 ChimerSeq STARFusion TCGA_RNA-Seq USP32-EPHA1 USP32 chr17 58469243 - EPHA1 chr7 143094750 - Exonic hg19 LUSC TCGA-22-5481 4 12 In-Frame Inter-chr q23.2 q35 Tumor suppressor gene Seq+ 37492 ChimerSeq STARFusion TCGA_RNA-Seq SLCO3A1-BMPR2 SLCO3A1 chr15 92397318 + BMPR2 chr2 203407034 + Exonic hg19 LUSC TCGA-22-5485 13 44 CDS-3'UTR Inter-chr q26.1 q33.1 TKL:STKR Tumor suppressor gene Seq+ 37493 ChimerSeq STARFusion TCGA_RNA-Seq COBLL1-SCN3A COBLL1 chr2 165600197 - SCN3A chr2 166043257 - Exonic hg19 LUSC TCGA-22-5485 2 12 CDS-5'UTR Intra-chr q24.3 q24.3 Seq+ 37494 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0195-NUP85 KIAA0195 chr17 73468010 + NUP85 chr17 73204622 + Exonic hg19 LUSC TCGA-22-5485 2 11 In-Frame Intra-chr q25.1 Seq+ 37495 ChimerSeq STARFusion TCGA_RNA-Seq PACSIN2-A4GALT PACSIN2 chr22 43411027 - A4GALT chr22 43091637 - Exonic hg19 LUSC TCGA-18-5595 5 21 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 37496 ChimerSeq STARFusion TCGA_RNA-Seq AKAP11-DGKH AKAP11 chr13 42860535 + DGKH chr13 42826545 + Exonic hg19 LUSC TCGA-34-5928 14 39 CDS-3'UTR Intra-chr q14.11 q14.11 Seq+ 37497 ChimerSeq STARFusion TCGA_RNA-Seq EZH2-AUTS2 EZH2 chr7 148543589 - AUTS2 chr7 70227856 + Exonic hg19 LUSC TCGA-34-5928 3 48 Out-of-frame Intra-chr q36.1 Oncogene Tumor suppressor gene q11.22 Seq+ 37498 ChimerSeq STARFusion TCGA_RNA-Seq AKAP11-FHP1 AKAP11 chr13 42860535 + FHP1 chr13 42826545 + Exonic hg19 LUSC TCGA-34-5928 4 25 Out-of-frame Intra-chr q14.11 q14.11 37499 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2A-COL1A1 PRRC2A chr6 31602951 + COL1A1 chr17 48267269 - Exonic hg19 LUSC TCGA-34-5928 3 10 Out-of-frame Inter-chr q21.33 Oncogene Seq+ 37500 ChimerSeq STARFusion TCGA_RNA-Seq LINS-KRT5 LINS chr15 101142330 - KRT5 chr12 52914096 - Exonic hg19 LUSC TCGA-18-5592 5 8 Out-of-frame Inter-chr q13.13 37501 ChimerSeq STARFusion TCGA_RNA-Seq LINS-KRT5 LINS chr15 101142326 - KRT5 chr12 52914134 - Exonic hg19 LUSC TCGA-18-5592 5 8 5'UTR-5'UTR Inter-chr q13.13 37502 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CKMT1A IGH@ chr14 107034729 - CKMT1A chr15 43986394 + Exonic hg19 LUSC TCGA-68-7756 12 1 Out-of-frame Inter-chr 32.33 q15.3 37503 ChimerSeq STARFusion TCGA_RNA-Seq UBAC2-IGKC UBAC2 chr13 99992741 + IGKC chr2 89157194 - Exonic hg19 LUSC TCGA-68-7757 6 1 Out-of-frame Inter-chr q32.3 p11.2 37504 ChimerSeq STARFusion TCGA_RNA-Seq TPD52L1-RNF217 TPD52L1 chr6 125475116 + RNF217 chr6 125379088 + Exonic hg19 LUSC TCGA-68-7755 34 133 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 37505 ChimerSeq STARFusion TCGA_RNA-Seq NBEAL1-MLLT3 NBEAL1 chr2 204067504 + MLLT3 chr9 20365742 - Exonic hg19 LUSC TCGA-68-7755 6 10 In-Frame Inter-chr q33.2 p21.3 Seq+ 37506 ChimerSeq STARFusion TCGA_RNA-Seq OTUD7B-HORMAD1 OTUD7B chr1 149949361 - HORMAD1 chr1 150692014 - Exonic hg19 LUSC TCGA-68-7755 4 14 CDS-5'UTR Intra-chr q21.2 q21.3 Seq+ 37507 ChimerSeq STARFusion TCGA_RNA-Seq GFPT1-NFU1 GFPT1 chr2 69590677 - NFU1 chr2 69623422 - Exonic hg19 LUSC TCGA-37-3789 3 7 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 37508 ChimerSeq STARFusion TCGA_RNA-Seq CENPT-RPL14 CENPT chr16 67876834 - RPL14 chr3 40503553 + Exonic hg19 LUSC TCGA-37-3789 3 6 Out-of-frame Inter-chr q22.1 Transcription factor p22.1 37509 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992064 + VMP1 chr17 57889031 + Exonic hg19 LUSC TCGA-94-8035 8 26 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 37510 ChimerSeq STARFusion TCGA_RNA-Seq OGFOD3-HEXDC OGFOD3 chr17 80373282 - HEXDC chr17 80386434 + Exonic hg19 LUSC TCGA-94-8035 4 27 Out-of-frame Intra-chr q25.3 q25.3 37511 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPR-E2F2 HNRNPR chr1 23660011 - E2F2 chr1 23850980 - Exonic hg19 LUSC TCGA-94-8035 6 15 In-Frame Intra-chr Tumor suppressor gene Transcription factor Seq+ 37512 ChimerSeq STARFusion TCGA_RNA-Seq OGFOD3-HEXDC OGFOD3 chr17 80373274 - HEXDC chr17 80386434 + Exonic hg19 LUSC TCGA-94-8035 2 27 Out-of-frame Intra-chr q25.3 q25.3 37513 ChimerSeq STARFusion TCGA_RNA-Seq STAG1-NCK1 STAG1 chr3 136221470 - NCK1 chr3 136646826 + Exonic hg19 LUSC TCGA-94-8035 3 11 CDS-5'UTR Intra-chr q22.3 q22.3 Seq+ 37514 ChimerSeq STARFusion TCGA_RNA-Seq KIRREL-CD1A KIRREL chr1 157963518 + CD1A chr1 158224874 + Exonic hg19 LUSC TCGA-85-7710 11 64 In-Frame Intra-chr q23.1 q23.1 Seq+ 37515 ChimerSeq STARFusion TCGA_RNA-Seq KIRREL-CD1C KIRREL chr1 157963518 + CD1C chr1 158260924 + Exonic hg19 LUSC TCGA-85-7710 9 42 In-Frame Intra-chr q23.1 q23.1 Seq+ 37516 ChimerSeq STARFusion TCGA_RNA-Seq DENND1A-RRAGB DENND1A chr9 126641230 - RRAGB chrX 55745747 + Exonic hg19 LUSC TCGA-85-7710 2 12 Out-of-frame Inter-chr q33.3 p11.21 Seq+ 37517 ChimerSeq STARFusion TCGA_RNA-Seq GLG1-CFDP1 GLG1 chr16 74566019 - CFDP1 chr16 75327940 - Exonic hg19 LUSC TCGA-43-2578 31 136 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 37518 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2-PFN1P2 NOTCH2 chr1 120484149 - PFN1P2 chr1 144612821 - Exonic hg19 LUSC TCGA-43-2578 24 90 CDS-5'UTR Intra-chr p12 Oncogene Tumor suppressor gene p11.2 37519 ChimerSeq STARFusion TCGA_RNA-Seq GBE1-ZNF385D GBE1 chr3 81627076 - ZNF385D chr3 21478695 - Exonic hg19 LUSC TCGA-43-2578 22 61 In-Frame Intra-chr p12.2 p24.3 Transcription factor Seq+ 37520 ChimerSeq STARFusion TCGA_RNA-Seq TXNRD1-HCFC2 TXNRD1 chr12 104682818 + HCFC2 chr12 104474524 + Exonic hg19 LUSC TCGA-43-2578 6 69 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 37521 ChimerSeq STARFusion TCGA_RNA-Seq TXNRD1-HCFC2 TXNRD1 chr12 104682818 + HCFC2 chr12 104473223 + Exonic hg19 LUSC TCGA-43-2578 3 69 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 37522 ChimerSeq STARFusion TCGA_RNA-Seq TXNRD1-HCFC2 TXNRD1 chr12 104681124 + HCFC2 chr12 104476278 + Exonic hg19 LUSC TCGA-43-2578 2 69 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 37523 ChimerSeq STARFusion TCGA_RNA-Seq TXNRD1-HCFC2 TXNRD1 chr12 104682818 + HCFC2 chr12 104476278 + Exonic hg19 LUSC TCGA-43-2578 2 69 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 37524 ChimerSeq STARFusion TCGA_RNA-Seq CARS-OSBPL5 CARS chr11 3059280 - OSBPL5 chr11 3115564 - Exonic hg19 LUSC TCGA-43-2578 4 11 Out-of-frame Intra-chr p15.4 Seq+ 37525 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-C11orf80 KDM2A chr11 66888829 + C11orf80 chr11 66605841 + Exonic hg19 LUSC TCGA-43-2578 3 12 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 37526 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-C11orf80 KDM2A chr11 66888829 + C11orf80 chr11 66605838 + Exonic hg19 LUSC TCGA-43-2578 3 12 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 37527 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-RCE1 KDM2A chr11 66888829 + RCE1 chr11 66605838 + Exonic hg19 LUSC TCGA-43-2578 4 8 5'UTR-5'UTR Intra-chr q13.2 Transcription factor q13.2 37528 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPA2B1-SKAP2 HNRNPA2B1 chr7 26235467 - SKAP2 chr7 26729981 - Exonic hg19 LUSC TCGA-43-2578 3 5 In-Frame Intra-chr p15.2 p15.2 Seq+ 37529 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-MT2A IGH@ chr14 106109703 - MT2A chr16 56642501 + Exonic hg19 LUSC TCGA-43-2578 3 5 Out-of-frame Inter-chr 32.33 q13 Tumor suppressor gene 37530 ChimerSeq STARFusion TCGA_RNA-Seq ITGAV-FARP2 ITGAV chr2 187534541 + FARP2 chr2 242429377 + Exonic hg19 LUSC TCGA-43-2578 2 8 In-Frame Intra-chr q32.1 Tumor suppressor gene q37.3 Seq+ 37531 ChimerSeq STARFusion TCGA_RNA-Seq NEMF-C14orf182 NEMF chr14 50307436 - C14orf182 chr14 50459591 - Exonic hg19 LUSC TCGA-37-3783 23 131 In-Frame Intra-chr q21.3 Seq+ 37532 ChimerSeq STARFusion TCGA_RNA-Seq NEMF-C14orf182 NEMF chr14 50312858 - C14orf182 chr14 50459591 - Exonic hg19 LUSC TCGA-37-3783 6 128 Out-of-frame Intra-chr q21.3 Seq+ 37533 ChimerSeq STARFusion TCGA_RNA-Seq TOMM20-DPT TOMM20 chr1 235283133 - DPT chr1 168683584 - Exonic hg19 LUSC TCGA-37-3783 3 10 Out-of-frame Intra-chr q42.3 q24.2 Seq+ 37534 ChimerSeq STARFusion TCGA_RNA-Seq TFG-TMEM45A TFG chr3 100438902 + TMEM45A chr3 100274053 + Exonic hg19 LUSC TCGA-37-3783 2 7 CDS-5'UTR Intra-chr q12.2 q12.2 Seq+ 37535 ChimerSeq STARFusion TCGA_RNA-Seq ACP1-IGH@ ACP1 chr2 272228 + IGH@ chr14 106330464 - Exonic hg19 LUSC TCGA-66-2757 19 2 Out-of-frame Inter-chr p25.3 32.33 37536 ChimerSeq STARFusion TCGA_RNA-Seq ACP1-IGHG3 ACP1 chr2 272228 + IGHG3 chr14 106330464 - Exonic hg19 LUSC TCGA-66-2757 19 1 Out-of-frame Inter-chr p25.3 37537 ChimerSeq STARFusion TCGA_RNA-Seq ACP1-IGH@ ACP1 chr2 272228 + IGH@ chr14 106330063 - Exonic hg19 LUSC TCGA-66-2757 9 2 Out-of-frame Inter-chr p25.3 32.33 37538 ChimerSeq STARFusion TCGA_RNA-Seq ACP1-IGHG3 ACP1 chr2 272228 + IGHG3 chr14 106330063 - Exonic hg19 LUSC TCGA-66-2757 9 1 Out-of-frame Inter-chr p25.3 37539 ChimerSeq STARFusion TCGA_RNA-Seq FKBP4-IGKC FKBP4 chr12 2909679 + IGKC chr2 89160768 - Exonic hg19 LUSC TCGA-66-2757 7 1 Out-of-frame Inter-chr p13.33 p11.2 37540 ChimerSeq STARFusion TCGA_RNA-Seq GON4L-SSR2 GON4L chr1 155823067 - SSR2 chr1 155979441 - Exonic hg19 LUSC TCGA-66-2757 5 9 Out-of-frame Intra-chr q22 q22 Seq+ 37541 ChimerSeq STARFusion TCGA_RNA-Seq CYTIP-MGAT5 CYTIP chr2 158343844 - MGAT5 chr2 135027957 + Exonic hg19 LUSC TCGA-66-2756 86 436 5'UTR-CDS Intra-chr q24.1 q21.2 Seq+ 37542 ChimerSeq STARFusion TCGA_RNA-Seq PIK3CB-BFSP2 PIK3CB chr3 138452203 - BFSP2 chr3 133185672 + Exonic hg19 LUSC TCGA-66-2756 67 172 In-Frame Intra-chr q22.3 Oncogene q22.1 Seq+ 37543 ChimerSeq STARFusion TCGA_RNA-Seq ACYP2-PPP1CB ACYP2 chr2 54200947 + PPP1CB chr2 29004604 + Exonic hg19 LUSC TCGA-66-2756 23 61 5'UTR-CDS Intra-chr p16.2 p23.2 Seq+ 37544 ChimerSeq STARFusion TCGA_RNA-Seq CCP110-GOLPH3L CCP110 chr16 19539344 + GOLPH3L chr1 150621224 - Exonic hg19 LUSC TCGA-66-2756 10 61 Out-of-frame Inter-chr p12.3 q21.3 Seq+ 37545 ChimerSeq STARFusion TCGA_RNA-Seq ACYP2-SPDYA ACYP2 chr2 54200947 + SPDYA chr2 29004604 + Exonic hg19 LUSC TCGA-66-2756 13 32 Out-of-frame Intra-chr p16.2 p23.2 37546 ChimerSeq STARFusion TCGA_RNA-Seq ACYP2-PPP1CB ACYP2 chr2 54201186 + PPP1CB chr2 29004604 + Exonic hg19 LUSC TCGA-66-2756 5 61 5'UTR-CDS Intra-chr p16.2 p23.2 Seq+ 37547 ChimerSeq STARFusion TCGA_RNA-Seq PAK2-ECE2 PAK2 chr3 196467028 + ECE2 chr3 183975261 + Exonic hg19 LUSC TCGA-66-2756 14 24 5'UTR-CDS Intra-chr q29 STE:STE20 q27.1 Seq+ 37548 ChimerSeq STARFusion TCGA_RNA-Seq CDC25A-SPINK8 CDC25A chr3 48205797 - SPINK8 chr3 48351436 - Exonic hg19 LUSC TCGA-66-2756 6 52 In-Frame Intra-chr p21.31 p21.31 Seq+ 37549 ChimerSeq STARFusion TCGA_RNA-Seq RTN4-MITD1 RTN4 chr2 55276881 - MITD1 chr2 99790479 - Exonic hg19 LUSC TCGA-66-2756 9 37 In-Frame Intra-chr p16.1 Tumor suppressor gene q11.2 Seq+ 37550 ChimerSeq STARFusion TCGA_RNA-Seq UBR1-TGM5 UBR1 chr15 43276095 - TGM5 chr15 43528035 - Exonic hg19 LUSC TCGA-66-2756 5 17 In-Frame Intra-chr q15.2 q15.2 Seq+ 37551 ChimerSeq STARFusion TCGA_RNA-Seq DISP2-PHGR1 DISP2 chr15 40650641 + PHGR1 chr15 40648274 + Exonic hg19 LUSC TCGA-66-2756 4 18 Out-of-frame Intra-chr q15.1 q15.1 Seq+ 37552 ChimerSeq STARFusion TCGA_RNA-Seq LPP-ST6GAL1 LPP chr3 187871809 + ST6GAL1 chr3 186790637 + Exonic hg19 LUSC TCGA-66-2756 4 10 5'UTR-CDS Intra-chr q27.3 Oncogene q27.3 Seq+ 37553 ChimerSeq STARFusion TCGA_RNA-Seq PDIA4-SCHIP1 PDIA4 chr7 148725413 - SCHIP1 chr3 159583952 + Exonic hg19 LUSC TCGA-66-2756 5 5 Out-of-frame Inter-chr q36.1 q25.33 Seq+ 37554 ChimerSeq STARFusion TCGA_RNA-Seq PLAA-RUSC2 PLAA chr9 26946895 - RUSC2 chr9 35546427 + Exonic hg19 LUSC TCGA-66-2756 2 17 CDS-5'UTR Intra-chr p21.2 p13.3 Seq+ 37555 ChimerSeq STARFusion TCGA_RNA-Seq TANGO6-CLEC2L TANGO6 chr16 69074324 + CLEC2L chr7 139221020 + Exonic hg19 LUSC TCGA-66-2756 5 2 Out-of-frame Inter-chr q22.1 q34 Seq+ 37556 ChimerSeq STARFusion TCGA_RNA-Seq LPP-ST6GAL1 LPP chr3 187926106 + ST6GAL1 chr3 186790637 + Exonic hg19 LUSC TCGA-66-2756 2 9 5'UTR-CDS Intra-chr q27.3 Oncogene q27.3 Seq+ 37557 ChimerSeq STARFusion TCGA_RNA-Seq ESYT3-RPN1 ESYT3 chr3 138153967 + RPN1 chr3 128363826 - Exonic hg19 LUSC TCGA-66-2756 2 6 In-Frame Intra-chr q22.3 q21.3 Seq+ 37558 ChimerSeq STARFusion TCGA_RNA-Seq FRAS1-MRPL1 FRAS1 chr4 78987170 + MRPL1 chr4 78870951 + Exonic hg19 LUSC TCGA-66-2756 2 6 In-Frame Intra-chr q21.21 q21.1 Seq+ 37559 ChimerSeq STARFusion TCGA_RNA-Seq MYO9A-HEXA MYO9A chr15 72410021 - HEXA chr15 72643575 - Exonic hg19 LUSC TCGA-66-2756 2 6 5'UTR-CDS Intra-chr q23 q23 Seq+ 37560 ChimerSeq STARFusion TCGA_RNA-Seq PNMA5-BCAP31 PNMA5 chrX 152160460 - BCAP31 chrX 152966430 - Exonic hg19 LUSC TCGA-66-2756 2 6 5'UTR-CDS Intra-chr q28 q28 Seq+ 37561 ChimerSeq STARFusion TCGA_RNA-Seq CXCL16-IGH@ CXCL16 chr17 4642742 - IGH@ chr14 106209407 - Exonic hg19 LUSC TCGA-66-2755 9 2 Out-of-frame Inter-chr p13.2 32.33 37562 ChimerSeq STARFusion TCGA_RNA-Seq CXCL16-IGH@ CXCL16 chr17 4642742 - IGH@ chr14 106111126 - Exonic hg19 LUSC TCGA-66-2755 7 1 Out-of-frame Inter-chr p13.2 32.33 37563 ChimerSeq STARFusion TCGA_RNA-Seq ABL1-CCBL1 ABL1 chr9 133589842 + CCBL1 chr9 131607690 - Exonic hg19 LUSC TCGA-66-2755 2 8 CDS-5'UTR Intra-chr q34.12 TK:Abl Oncogene Seq+ 37564 ChimerSeq STARFusion TCGA_RNA-Seq NCALD-NSMCE2 NCALD chr8 102803090 - NSMCE2 chr8 126369461 + Exonic hg19 LUSC TCGA-66-2754 27 97 5'UTR-CDS Intra-chr q22.3 q24.13 Seq+ 37565 ChimerSeq STARFusion TCGA_RNA-Seq NCALD-NSMCE2 NCALD chr8 102928037 - NSMCE2 chr8 126369461 + Exonic hg19 LUSC TCGA-66-2754 7 96 5'UTR-CDS Intra-chr q22.3 q24.13 Seq+ 37566 ChimerSeq STARFusion TCGA_RNA-Seq OPRD1-EPB41 OPRD1 chr1 29185815 + EPB41 chr1 29313960 + Exonic hg19 LUSC TCGA-66-2754 5 7 CDS-5'UTR Intra-chr p35.3 p35.3 Tumor suppressor gene 37567 ChimerSeq STARFusion TCGA_RNA-Seq RAD51D-SLCO6A1 RAD51D chr17 33433405 - SLCO6A1 chr5 101748847 - Exonic hg19 LUSC TCGA-66-2754 3 13 Out-of-frame Inter-chr q12 q21.1 Seq+ 37568 ChimerSeq STARFusion TCGA_RNA-Seq MTRR-NMD3 MTRR chr5 7897360 + NMD3 chr3 160965046 + Exonic hg19 LUSC TCGA-66-2753 6 43 In-Frame Inter-chr p15.31 Oncogene q26.1 Seq+ 37569 ChimerSeq STARFusion TCGA_RNA-Seq FAM71E1-IGH@ FAM71E1 chr19 50979660 - IGH@ chr14 106330060 - Exonic hg19 LUSC TCGA-66-2753 14 1 Out-of-frame Inter-chr q13.33 32.33 37570 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38065213 + MIPOL1 chr14 38016110 + Exonic hg19 LUSC TCGA-66-2753 7 28 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 37571 ChimerSeq STARFusion TCGA_RNA-Seq PLD3-HIPK4 PLD3 chr19 40880527 + HIPK4 chr19 40886461 - Exonic hg19 LUSC TCGA-66-2759 58 436 Out-of-frame Intra-chr q13.2 q13.2 CMGC:DYRK Seq+ 37572 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ACTN4 IGH@ chr14 106993813 - ACTN4 chr19 39218513 + Exonic hg19 LUSC TCGA-66-2759 56 2 Out-of-frame Inter-chr 32.33 37573 ChimerSeq STARFusion TCGA_RNA-Seq LATS1-LACE1 LATS1 chr6 150038985 - LACE1 chr6 108723200 + Exonic hg19 LUSC TCGA-66-2759 18 112 5'UTR-CDS Intra-chr q25.1 AGC:NDR Tumor suppressor gene Seq+ 37574 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ACTN4 IGH@ chr14 106815721 - ACTN4 chr19 39218513 + Exonic hg19 LUSC TCGA-66-2759 44 2 Out-of-frame Inter-chr 32.33 37575 ChimerSeq STARFusion TCGA_RNA-Seq LATS1-LACE1 LATS1 chr6 150038985 - LACE1 chr6 108768417 + Exonic hg19 LUSC TCGA-66-2759 6 110 5'UTR-CDS Intra-chr q25.1 AGC:NDR Tumor suppressor gene Seq+ 37576 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ACTN4 IGH@ chr14 106691672 - ACTN4 chr19 39218513 + Exonic hg19 LUSC TCGA-66-2759 32 2 Out-of-frame Inter-chr 32.33 37577 ChimerSeq STARFusion TCGA_RNA-Seq LATS1-LACE1 LATS1 chr6 150038985 - LACE1 chr6 108798068 + Exonic hg19 LUSC TCGA-66-2759 3 110 5'UTR-CDS Intra-chr q25.1 AGC:NDR Tumor suppressor gene Seq+ 37578 ChimerSeq STARFusion TCGA_RNA-Seq EGLN2-PLD3 EGLN2 chr19 41307320 + PLD3 chr19 40877580 + Exonic hg19 LUSC TCGA-66-2759 15 54 In-Frame Intra-chr q13.2 q13.2 Seq+ 37579 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ACTN4 IGH@ chr14 107131031 - ACTN4 chr19 39218514 + Exonic hg19 LUSC TCGA-66-2759 27 2 Out-of-frame Inter-chr 32.33 37580 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ACTN4 IGH@ chr14 106518399 - ACTN4 chr19 39218513 + Exonic hg19 LUSC TCGA-66-2759 23 2 Out-of-frame Inter-chr 32.33 37581 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-FGR WASF2 chr1 27816497 - FGR chr1 27967635 - Exonic hg19 LUSC TCGA-66-2759 3 70 5'UTR-5'UTR Intra-chr p36.11 p35.3 TK:Src Seq+ 37582 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-FGR WASF2 chr1 27816497 - FGR chr1 27951662 - Exonic hg19 LUSC TCGA-66-2759 3 70 5'UTR-5'UTR Intra-chr p36.11 p35.3 TK:Src Seq+ 37583 ChimerSeq STARFusion TCGA_RNA-Seq SYMPK-ZNF573 SYMPK chr19 46330768 - ZNF573 chr19 38231095 - Exonic hg19 LUSC TCGA-66-2759 13 26 Out-of-frame Intra-chr q13.32 q13.13 Transcription factor Seq+ 37584 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ACTN4 IGH@ chr14 106791003 - ACTN4 chr19 39218514 + Exonic hg19 LUSC TCGA-66-2759 13 2 Out-of-frame Inter-chr 32.33 37585 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K5-NKAIN2 MAP3K5 chr6 137041588 - NKAIN2 chr6 125112485 + Exonic hg19 LUSC TCGA-66-2759 4 23 In-Frame Intra-chr q23.3 STE:STE11 q22.31 Seq+ 37586 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ACTN4 IGH@ chr14 106829593 - ACTN4 chr19 39218513 + Exonic hg19 LUSC TCGA-66-2759 8 2 Out-of-frame Inter-chr 32.33 37587 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ACTN4 IGH@ chr14 107218675 - ACTN4 chr19 39218513 + Exonic hg19 LUSC TCGA-66-2759 7 2 Out-of-frame Inter-chr 32.33 37588 ChimerSeq STARFusion TCGA_RNA-Seq TMEM242-GTF2H5 TMEM242 chr6 157739814 - GTF2H5 chr6 158591502 + Exonic hg19 LUSC TCGA-66-2759 3 10 CDS-5'UTR Intra-chr q25.3 q25.3 Seq+ 37589 ChimerSeq STARFusion TCGA_RNA-Seq IFT74-WNK2 IFT74 chr9 26962085 + WNK2 chr9 96079802 + Exonic hg19 LUSC TCGA-66-2759 3 6 In-Frame Intra-chr p21.2 q22.31 Tumor suppressor gene Seq+ 37590 ChimerSeq STARFusion TCGA_RNA-Seq TMEM242-GTF2H5 TMEM242 chr6 157739814 - GTF2H5 chr6 158613009 + Exonic hg19 LUSC TCGA-66-2759 2 10 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 37591 ChimerSeq STARFusion TCGA_RNA-Seq SESN1-EYS SESN1 chr6 109414998 - EYS chr6 64498142 - Exonic hg19 LUSC TCGA-66-2759 2 8 In-Frame Intra-chr q21 q12 Seq+ 37592 ChimerSeq STARFusion TCGA_RNA-Seq AP2A2-PSMD13 AP2A2 chr11 977224 + PSMD13 chr11 252505 + Exonic hg19 LUSC TCGA-66-2758 62 591 In-Frame Intra-chr p15.5 p15.5 Seq+ 37593 ChimerSeq STARFusion TCGA_RNA-Seq AP2A2-PSMD13 AP2A2 chr11 977224 + PSMD13 chr11 251546 + Exonic hg19 LUSC TCGA-66-2758 45 582 In-Frame Intra-chr p15.5 p15.5 Seq+ 37594 ChimerSeq STARFusion TCGA_RNA-Seq AP2A2-PSMD13 AP2A2 chr11 977224 + PSMD13 chr11 251820 + Exonic hg19 LUSC TCGA-66-2758 35 582 In-Frame Intra-chr p15.5 p15.5 Seq+ 37595 ChimerSeq STARFusion TCGA_RNA-Seq BTBD1-MRPL46 BTBD1 chr15 83725141 - MRPL46 chr15 89009004 - Exonic hg19 LUSC TCGA-66-2758 46 253 In-Frame Intra-chr q25.2 q25.3 Seq+ 37596 ChimerSeq STARFusion TCGA_RNA-Seq SERINC2-ZCCHC17 SERINC2 chr1 31901915 + ZCCHC17 chr1 31836879 + Exonic hg19 LUSC TCGA-66-2758 15 253 Out-of-frame Intra-chr p35.2 p35.2 Seq+ 37597 ChimerSeq STARFusion TCGA_RNA-Seq SERINC2-ZCCHC17 SERINC2 chr1 31902385 + ZCCHC17 chr1 31836879 + Exonic hg19 LUSC TCGA-66-2758 10 231 Out-of-frame Intra-chr p35.2 p35.2 Seq+ 37598 ChimerSeq STARFusion TCGA_RNA-Seq SERINC2-ZCCHC17 SERINC2 chr1 31901915 + ZCCHC17 chr1 31836695 + Exonic hg19 LUSC TCGA-66-2758 4 231 Out-of-frame Intra-chr p35.2 p35.2 Seq+ 37599 ChimerSeq STARFusion TCGA_RNA-Seq SERINC2-ZCCHC17 SERINC2 chr1 31902385 + ZCCHC17 chr1 31836695 + Exonic hg19 LUSC TCGA-66-2758 3 231 Out-of-frame Intra-chr p35.2 p35.2 Seq+ 37600 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-AHDC1 WASF2 chr1 27755271 - AHDC1 chr1 27879696 - Exonic hg19 LUSC TCGA-66-2758 20 138 CDS-5'UTR Intra-chr p36.11 p35.3 Transcription factor Seq+ 37601 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-AHDC1 WASF2 chr1 27816497 - AHDC1 chr1 27885394 - Exonic hg19 LUSC TCGA-66-2758 8 108 5'UTR-5'UTR Intra-chr p36.11 p35.3 Transcription factor Seq+ 37602 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-AHDC1 WASF2 chr1 27755271 - AHDC1 chr1 27861427 - Exonic hg19 LUSC TCGA-66-2758 4 108 CDS-3'UTR Intra-chr p36.11 p35.3 Transcription factor Seq+ 37603 ChimerSeq STARFusion TCGA_RNA-Seq ZNF664-DDX55 ZNF664 chr12 124472685 + DDX55 chr12 124103979 + Exonic hg19 LUSC TCGA-66-2758 10 81 5'UTR-CDS Intra-chr q24.31 Transcription factor q24.31 Seq+ 37604 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-AHDC1 WASF2 chr1 27755271 - AHDC1 chr1 27879815 - Exonic hg19 LUSC TCGA-66-2758 2 108 CDS-5'UTR Intra-chr p36.11 p35.3 Transcription factor Seq+ 37605 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-AHDC1 WASF2 chr1 27755271 - AHDC1 chr1 27879801 - Exonic hg19 LUSC TCGA-66-2758 2 108 CDS-5'UTR Intra-chr p36.11 p35.3 Transcription factor Seq+ 37606 ChimerSeq STARFusion TCGA_RNA-Seq ZNF664-DDX55 ZNF664 chr12 124472685 + DDX55 chr12 124103995 + Exonic hg19 LUSC TCGA-66-2758 6 70 5'UTR-CDS Intra-chr q24.31 Transcription factor q24.31 Seq+ 37607 ChimerSeq STARFusion TCGA_RNA-Seq FAM101A-DDX55 FAM101A chr12 124472685 + DDX55 chr12 124103979 + Exonic hg19 LUSC TCGA-66-2758 7 51 5'UTR-CDS Intra-chr q24.31 37608 ChimerSeq STARFusion TCGA_RNA-Seq RASA2-ACPL2 RASA2 chr3 141206058 + ACPL2 chr3 140997184 + Exonic hg19 LUSC TCGA-66-2758 12 21 In-Frame Intra-chr q23 Seq+ 37609 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0100-SEZ6 KIAA0100 chr17 26945809 - SEZ6 chr17 27296970 - Exonic hg19 LUSC TCGA-66-2758 5 38 In-Frame Intra-chr q11.2 q11.2 Seq+ 37610 ChimerSeq STARFusion TCGA_RNA-Seq FAM101A-DDX55 FAM101A chr12 124472685 + DDX55 chr12 124103995 + Exonic hg19 LUSC TCGA-66-2758 3 42 Out-of-frame Intra-chr q24.31 37611 ChimerSeq STARFusion TCGA_RNA-Seq OCLN-MARVELD2 OCLN chr5 68788727 + MARVELD2 chr5 68736277 + Exonic hg19 LUSC TCGA-66-2758 4 29 5'UTR-CDS Intra-chr q13.2 q13.2 37612 ChimerSeq STARFusion TCGA_RNA-Seq COASY-IGHA1 COASY chr17 40714608 + IGHA1 chr14 106175004 - Exonic hg19 LUSC TCGA-66-2758 10 0 Out-of-frame Inter-chr q21.2 37613 ChimerSeq STARFusion TCGA_RNA-Seq OCLN-MARVELD2 OCLN chr5 68788486 + MARVELD2 chr5 68736277 + Exonic hg19 LUSC TCGA-66-2758 2 28 5'UTR-CDS Intra-chr q13.2 q13.2 37614 ChimerSeq STARFusion TCGA_RNA-Seq SPIN1-FUT9 SPIN1 chr9 91003453 + FUT9 chr6 96561915 + Exonic hg19 LUSC TCGA-66-2758 7 5 5'UTR-5'UTR Inter-chr q22.1 q16.1 Seq+ 37615 ChimerSeq STARFusion TCGA_RNA-Seq STX12-TMEM222 STX12 chr1 28116142 + TMEM222 chr1 27657211 + Exonic hg19 LUSC TCGA-66-2758 4 7 In-Frame Intra-chr p35.3 p36.11 Seq+ 37616 ChimerSeq STARFusion TCGA_RNA-Seq HSP90AA1-MOK HSP90AA1 chr14 102605587 - MOK chr14 102718332 - Exonic hg19 LUSC TCGA-66-2758 2 13 Out-of-frame Intra-chr q32.31 Oncogene q32.31 CMGC:RCK 37617 ChimerSeq STARFusion TCGA_RNA-Seq TBX2-IGH@ TBX2 chr17 59483078 + IGH@ chr14 106330071 - Exonic hg19 LUSC TCGA-98-A53C 136 2 Out-of-frame Inter-chr q23.2 Transcription factor 32.33 37618 ChimerSeq STARFusion TCGA_RNA-Seq TMCO3-SPACA7 TMCO3 chr13 114164739 + SPACA7 chr13 113047335 + Exonic hg19 LUSC TCGA-98-A53C 4 37 In-Frame Intra-chr q34 Seq+ 37619 ChimerSeq STARFusion TCGA_RNA-Seq FAM101B-IGHG1 FAM101B chr17 292159 - IGHG1 chr14 106209411 - Exonic hg19 LUSC TCGA-98-A53C 8 1 Out-of-frame Inter-chr q32.33 37620 ChimerSeq STARFusion TCGA_RNA-Seq ATG5-EPHA7 ATG5 chr6 106756239 - EPHA7 chr6 93982140 - Exonic hg19 LUSC TCGA-98-A53B 21 97 Out-of-frame Intra-chr q21 q16.1 Oncogene Seq+ 37621 ChimerSeq STARFusion TCGA_RNA-Seq PREP-POPDC3 PREP chr6 105845728 - POPDC3 chr6 105610035 - Exonic hg19 LUSC TCGA-98-A53B 9 34 CDS-5'UTR Intra-chr q21 q21 Seq+ 37622 ChimerSeq STARFusion TCGA_RNA-Seq PREP-POPDC3 PREP chr6 105845728 - POPDC3 chr6 105611638 - Exonic hg19 LUSC TCGA-98-A53B 8 34 CDS-5'UTR Intra-chr q21 q21 Seq+ 37623 ChimerSeq STARFusion TCGA_RNA-Seq KAT6A-SMIM19 KAT6A chr8 41905896 - SMIM19 chr8 42401612 + Exonic hg19 LUSC TCGA-98-A53B 6 16 Out-of-frame Intra-chr p11.21 Oncogene p11.21 Seq+ 37624 ChimerSeq STARFusion TCGA_RNA-Seq IL1RAP-COL6A5 IL1RAP chr3 190282142 + COL6A5 chr3 130092454 + Exonic hg19 LUSC TCGA-98-A53B 4 22 CDS-5'UTR Intra-chr q28 q22.1 Seq+ 37625 ChimerSeq STARFusion TCGA_RNA-Seq KAT6A-SMIM19 KAT6A chr8 41905896 - SMIM19 chr8 42403799 + Exonic hg19 LUSC TCGA-98-A53B 4 16 Out-of-frame Intra-chr p11.21 Oncogene p11.21 Seq+ 37626 ChimerSeq STARFusion TCGA_RNA-Seq ATG7-RSPH3 ATG7 chr3 11340890 + RSPH3 chr6 159403720 - Exonic hg19 LUSC TCGA-98-A53B 2 9 Out-of-frame Inter-chr p25.3 q25.3 Seq+ 37627 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG3 STK25 chr2 242434915 - IGHG3 chr14 106237745 - Exonic hg19 LUSC TCGA-85-8048 7 1 Out-of-frame Inter-chr q37.3 37628 ChimerSeq STARFusion TCGA_RNA-Seq GZMM-HNRNPM GZMM chr19 547436 + HNRNPM chr19 8553575 + Exonic hg19 LUSC TCGA-85-8048 4 11 Out-of-frame Intra-chr p13.3 p13.2 Seq+ 37629 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGH@ INTS1 chr7 1511981 - IGH@ chr14 106136184 - Exonic hg19 LUSC TCGA-85-8048 4 3 Out-of-frame Inter-chr p22.3 32.33 37630 ChimerSeq STARFusion TCGA_RNA-Seq ANXA8-IGL@ ANXA8 chr10 48271276 + IGL@ chr22 23235968 + Exonic hg19 LUSC TCGA-85-8048 4 1 Out-of-frame Inter-chr q11.22 q11.22 37631 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGHG1 INTS1 chr7 1511981 - IGHG1 chr14 106209410 - Exonic hg19 LUSC TCGA-85-8048 4 1 Out-of-frame Inter-chr p22.3 q32.33 37632 ChimerSeq STARFusion TCGA_RNA-Seq UBR3-IGH@ UBR3 chr2 170806219 + IGH@ chr14 106330459 - Exonic hg19 LUSC TCGA-85-8048 4 1 Out-of-frame Inter-chr q31.1 32.33 37633 ChimerSeq STARFusion TCGA_RNA-Seq ZFP36L1-IGKC ZFP36L1 chr14 69259837 - IGKC chr2 89161431 - Exonic hg19 LUSC TCGA-85-8048 3 3 Out-of-frame Inter-chr q24.1 p11.2 37634 ChimerSeq STARFusion TCGA_RNA-Seq ZMAT5-HIRA ZMAT5 chr22 30134319 - HIRA chr22 19319079 - Exonic hg19 LUSC TCGA-85-8048 2 7 Out-of-frame Intra-chr q12.2 q11.21 Tumor suppressor gene Seq+ 37635 ChimerSeq STARFusion TCGA_RNA-Seq EMP2-TERF2 EMP2 chr16 10637427 - TERF2 chr16 69419389 - Exonic hg19 LUSC TCGA-77-7463 22 28 In-Frame Intra-chr p13.13 Tumor suppressor gene q22.1 Transcription factor Seq+ 37636 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SPTB IGH@ chr14 106805211 - SPTB chr14 65241116 - Exonic hg19 LUSC TCGA-98-A53I 14 1 Out-of-frame Intra-chr 32.33 q23.3 37637 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-STX7 IGH@ chr14 107169933 - STX7 chr6 132780778 - Exonic hg19 LUSC TCGA-98-A53I 11 1 Out-of-frame Inter-chr 32.33 q23.2 37638 ChimerSeq STARFusion TCGA_RNA-Seq COL1A2-IGH@ COL1A2 chr7 94023881 + IGH@ chr14 106330467 - Exonic hg19 LUSC TCGA-98-A53I 10 3 Out-of-frame Inter-chr q21.3 32.33 37639 ChimerSeq STARFusion TCGA_RNA-Seq COL1A2-IGHG3 COL1A2 chr7 94023881 + IGHG3 chr14 106330467 - Exonic hg19 LUSC TCGA-98-A53I 10 2 Out-of-frame Inter-chr q21.3 37640 ChimerSeq STARFusion TCGA_RNA-Seq PRKACA-ASF1B PRKACA chr19 14203948 - ASF1B chr19 14237050 - Exonic hg19 LUSC TCGA-98-A53I 5 20 Out-of-frame Intra-chr p13.12 p13.12 Seq+ 37641 ChimerSeq STARFusion TCGA_RNA-Seq COL1A2-IGH@ COL1A2 chr7 94023881 + IGH@ chr14 106330066 - Exonic hg19 LUSC TCGA-98-A53I 7 3 Out-of-frame Inter-chr q21.3 32.33 37642 ChimerSeq STARFusion TCGA_RNA-Seq COL1A2-IGHG3 COL1A2 chr7 94023881 + IGHG3 chr14 106330066 - Exonic hg19 LUSC TCGA-98-A53I 7 2 Out-of-frame Inter-chr q21.3 37643 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB6-AGT DNAJB6 chr7 157178305 + AGT chr1 230841946 - Exonic hg19 LUSC TCGA-98-A53H 12 32 In-Frame Inter-chr q36.3 q42.2 Seq+ 37644 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-RNF4 IGH@ chr14 107034731 - RNF4 chr4 2471165 + Exonic hg19 LUSC TCGA-98-A53H 19 2 Out-of-frame Inter-chr 32.33 p16.3 37645 ChimerSeq STARFusion TCGA_RNA-Seq GLI3-CROT GLI3 chr7 42116351 - CROT chr7 86975656 + Exonic hg19 LUSC TCGA-77-7465 7 28 CDS-5'UTR Intra-chr p14.1 Transcription factor q21.12 Seq+ 37646 ChimerSeq STARFusion TCGA_RNA-Seq NINL-GINS1 NINL chr20 25507044 - GINS1 chr20 25394426 + Exonic hg19 LUSC TCGA-77-7465 4 30 In-Frame Intra-chr p11.21 p11.21 Seq+ 37647 ChimerSeq STARFusion TCGA_RNA-Seq NINL-GINS1 NINL chr20 25507044 - GINS1 chr20 25397740 + Exonic hg19 LUSC TCGA-77-7465 4 30 Out-of-frame Intra-chr p11.21 p11.21 Seq+ 37648 ChimerSeq STARFusion TCGA_RNA-Seq NINL-GINS1 NINL chr20 25507044 - GINS1 chr20 25405847 + Exonic hg19 LUSC TCGA-77-7465 2 30 In-Frame Intra-chr p11.21 p11.21 Seq+ 37649 ChimerSeq STARFusion TCGA_RNA-Seq NINL-GINS1 NINL chr20 25507044 - GINS1 chr20 25422338 + Exonic hg19 LUSC TCGA-77-7465 2 30 In-Frame Intra-chr p11.21 p11.21 Seq+ 37650 ChimerSeq STARFusion TCGA_RNA-Seq CNOT1-GOT2 CNOT1 chr16 58663632 - GOT2 chr16 58768212 - Exonic hg19 LUSC TCGA-98-A539 3 33 5'UTR-5'UTR Intra-chr q21 q21 Seq+ 37651 ChimerSeq STARFusion TCGA_RNA-Seq CNOT1-GOT2 CNOT1 chr16 58663632 - GOT2 chr16 58757806 - Exonic hg19 LUSC TCGA-98-A539 3 30 5'UTR-CDS Intra-chr q21 q21 Seq+ 37652 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-CNBD2 EPB41L1 chr20 34800298 + CNBD2 chr20 34582960 + Exonic hg19 LUSC TCGA-98-A538 11 114 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 37653 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-CNBD2 EPB41L1 chr20 34802362 + CNBD2 chr20 34582960 + Exonic hg19 LUSC TCGA-98-A538 11 112 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 37654 ChimerSeq STARFusion TCGA_RNA-Seq BAG4-IGH@ BAG4 chr8 38067612 + IGH@ chr14 106330840 - Exonic hg19 LUSC TCGA-98-A538 26 1 Out-of-frame Inter-chr p11.23 32.33 37655 ChimerSeq STARFusion TCGA_RNA-Seq FLJ27365-FBLN1 FLJ27365 chr22 46494438 + FBLN1 chr22 45996187 + Exonic hg19 LUSC TCGA-98-A538 7 70 Out-of-frame Intra-chr q13.31 Tumor suppressor gene 37656 ChimerSeq STARFusion TCGA_RNA-Seq GPRC5A-IGH@ GPRC5A chr12 13070220 + IGH@ chr14 106329460 - Exonic hg19 LUSC TCGA-98-A538 11 1 Out-of-frame Inter-chr p13.1 Tumor suppressor gene 32.33 37657 ChimerSeq STARFusion TCGA_RNA-Seq PLCXD1-IGHGP PLCXD1 chrY 159756 + IGHGP chr14 106136184 - Exonic hg19 LUSC TCGA-98-A538 8 1 Out-of-frame Inter-chr p22.33 37658 ChimerSeq STARFusion TCGA_RNA-Seq MIR142-IGH@ MIR142 chr17 56409831 - IGH@ chr14 106209407 - Exonic hg19 LUSC TCGA-18-4086 38 4 Out-of-frame Inter-chr q22 Tumor suppressor gene 32.33 37659 ChimerSeq STARFusion TCGA_RNA-Seq MIR142-IGHG1 MIR142 chr17 56409831 - IGHG1 chr14 106209407 - Exonic hg19 LUSC TCGA-18-4086 38 2 Out-of-frame Inter-chr q22 Tumor suppressor gene q32.33 37660 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-CDK16 IGL@ chr22 22735714 + CDK16 chrX 47078147 + Exonic hg19 LUSC TCGA-18-4086 28 1 Out-of-frame Inter-chr q11.22 p11.3 37661 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-CDK16 IGL@ chr22 22712606 + CDK16 chrX 47078145 + Exonic hg19 LUSC TCGA-18-4086 26 1 Out-of-frame Inter-chr q11.22 p11.3 37662 ChimerSeq STARFusion TCGA_RNA-Seq MIR142-IGH@ MIR142 chr17 56409831 - IGH@ chr14 106136181 - Exonic hg19 LUSC TCGA-18-4086 25 4 Out-of-frame Inter-chr q22 Tumor suppressor gene 32.33 37663 ChimerSeq STARFusion TCGA_RNA-Seq CHPF2-IGKC CHPF2 chr7 150930282 + IGKC chr2 89161074 - Exonic hg19 LUSC TCGA-18-4086 25 1 Out-of-frame Inter-chr q36.1 p11.2 37664 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1211-IGH@ KIAA1211 chr4 57181890 + IGH@ chr14 106330069 - Exonic hg19 LUSC TCGA-18-4086 18 0 Out-of-frame Inter-chr q12 32.33 37665 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1211-IGHG3 KIAA1211 chr4 57181890 + IGHG3 chr14 106330069 - Exonic hg19 LUSC TCGA-18-4086 18 0 Out-of-frame Inter-chr q12 37666 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1211-IGHJ5 KIAA1211 chr4 57181890 + IGHJ5 chr14 106330069 - Exonic hg19 LUSC TCGA-18-4086 18 0 Out-of-frame Inter-chr q12 37667 ChimerSeq STARFusion TCGA_RNA-Seq ITGB5-IGL@ ITGB5 chr3 124485082 - IGL@ chr22 23248512 + Exonic hg19 LUSC TCGA-18-4086 9 1 Out-of-frame Inter-chr q21.2 q11.22 37668 ChimerSeq STARFusion TCGA_RNA-Seq NADSYN1-C11orf34 NADSYN1 chr11 71192450 + C11orf34 chr11 112123132 - Exonic hg19 LUSC TCGA-18-4086 4 15 Out-of-frame Intra-chr q13.4 Seq+ 37669 ChimerSeq STARFusion TCGA_RNA-Seq MIR142-IGH@ MIR142 chr17 56409831 - IGH@ chr14 106111126 - Exonic hg19 LUSC TCGA-18-4086 6 3 Out-of-frame Inter-chr q22 Tumor suppressor gene 32.33 37670 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 LUSC TCGA-18-4086 2 6 In-Frame Intra-chr p13.3 p13.3 37671 ChimerSeq STARFusion TCGA_RNA-Seq MEF2B-RFXANK MEF2B chr19 19302890 - RFXANK chr19 19304748 + Exonic hg19 LUSC TCGA-MF-A522 65 88 5'UTR-5'UTR Intra-chr p13.11 Transcription factor p13.11 37672 ChimerSeq STARFusion TCGA_RNA-Seq MEF2BNB-RFXANK MEF2BNB chr19 19302890 - RFXANK chr19 19304748 + Exonic hg19 LUSC TCGA-MF-A522 65 88 CDS-5'UTR Intra-chr p13.11 Seq+ 37673 ChimerSeq STARFusion TCGA_RNA-Seq ZNF292-ORC3 ZNF292 chr6 87865477 + ORC3 chr6 88362834 + Exonic hg19 LUSC TCGA-MF-A522 7 16 Out-of-frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q15 37674 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA5-AEBP2 PLEKHA5 chr12 19506936 + AEBP2 chr12 19615444 + Exonic hg19 LUSC TCGA-MF-A522 4 20 Out-of-frame Intra-chr p12.3 p12.3 Transcription factor Seq+ 37675 ChimerSeq STARFusion TCGA_RNA-Seq LRP1B-IGH@ LRP1B chr2 142237965 - IGH@ chr14 107283096 - Exonic hg19 LUSC TCGA-MF-A522 4 13 Out-of-frame Inter-chr q22.2 Oncogene Tumor suppressor gene 32.33 37676 ChimerSeq STARFusion TCGA_RNA-Seq METTL16-FAM101B METTL16 chr17 2344784 - FAM101B chr17 293285 - Exonic hg19 LUSC TCGA-98-8020 2 34 Out-of-frame Intra-chr p13.3 37677 ChimerSeq STARFusion TCGA_RNA-Seq VCL-ADK VCL chr10 75802911 + ADK chr10 76285014 + Exonic hg19 LUSC TCGA-98-8020 3 22 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 37678 ChimerSeq STARFusion TCGA_RNA-Seq NARS2-ALG8 NARS2 chr11 78270585 - ALG8 chr11 77825438 - Exonic hg19 LUSC TCGA-98-8020 2 15 In-Frame Intra-chr q14.1 q14.1 Seq+ 37679 ChimerSeq STARFusion TCGA_RNA-Seq BRAP-FAM216A BRAP chr12 112103443 - FAM216A chr12 110927824 + Exonic hg19 LUSC TCGA-18-4083 49 268 Out-of-frame Intra-chr q24.12 q24.11 Seq+ 37680 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-IGHG2 DHRSX chrY 2134829 - IGHG2 chr14 106111128 - Exonic hg19 LUSC TCGA-18-4083 95 1 Out-of-frame Inter-chr p22.33 37681 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-IGHG2 DHRSX chrY 2134829 - IGHG2 chr14 106136183 - Exonic hg19 LUSC TCGA-18-4083 76 1 Out-of-frame Inter-chr p22.33 37682 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGHG3 TET3 chr2 74329258 + IGHG3 chr14 106237743 - Exonic hg19 LUSC TCGA-18-4083 14 1 Out-of-frame Inter-chr p13.1 Transcription factor 37683 ChimerSeq STARFusion TCGA_RNA-Seq CCNL2-IGHG4 CCNL2 chr1 1323165 - IGHG4 chr14 106111129 - Exonic hg19 LUSC TCGA-18-4083 12 1 Out-of-frame Inter-chr p36.33 37684 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-LRP5 PPP6R3 chr11 68228295 + LRP5 chr11 68213904 + Exonic hg19 LUSC TCGA-18-4083 4 29 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 37685 ChimerSeq STARFusion TCGA_RNA-Seq GPN3-LINC00478 GPN3 chr12 110905961 - LINC00478 chr21 17763934 + Exonic hg19 LUSC TCGA-18-4083 2 21 CDS-5'UTR Inter-chr q24.11 Seq+ 37686 ChimerSeq STARFusion TCGA_RNA-Seq VGLL4-LINC00606 VGLL4 chr3 11744445 - LINC00606 chr3 10803607 - Exonic hg19 LUSC TCGA-34-5929 3 10 Out-of-frame Intra-chr p25.2 p25.3 37687 ChimerSeq STARFusion TCGA_RNA-Seq SOAT2-IGH@ SOAT2 chr12 53517616 + IGH@ chr14 106209410 - Exonic hg19 LUSC TCGA-90-7964 8 0 Out-of-frame Inter-chr q13.13 32.33 37688 ChimerSeq STARFusion TCGA_RNA-Seq SOAT2-IGHG1 SOAT2 chr12 53517616 + IGHG1 chr14 106209410 - Exonic hg19 LUSC TCGA-90-7964 8 0 Out-of-frame Inter-chr q13.13 q32.33 37689 ChimerSeq STARFusion TCGA_RNA-Seq ERC1-MRPL51 ERC1 chr12 1100488 + MRPL51 chr12 6602138 - Exonic hg19 LUSC TCGA-56-8622 2 34 5'UTR-CDS Intra-chr p13.31 Seq+ 37690 ChimerSeq STARFusion TCGA_RNA-Seq TFDP1-CUL4A TFDP1 chr13 114265377 + CUL4A chr13 113873259 + Exonic hg19 LUSC TCGA-56-8622 3 17 Out-of-frame Intra-chr q34 Transcription factor q34 Seq+ 37691 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-DERL2 IGH@ chr14 106725200 - DERL2 chr17 5389864 - Exonic hg19 LUSC TCGA-56-8622 5 2 Out-of-frame Inter-chr 32.33 p13.2 37692 ChimerSeq STARFusion TCGA_RNA-Seq ADAT1-KARS ADAT1 chr16 75654529 - KARS chr16 75678360 - Exonic hg19 LUSC TCGA-56-8626 5 29 CDS-5'UTR Intra-chr q23.1 q23.1 Seq+ 37693 ChimerSeq STARFusion TCGA_RNA-Seq ITPRIPL2-RN7SL2 ITPRIPL2 chr16 19131490 + RN7SL2 chr14 50329500 - Exonic hg19 LUSC TCGA-56-8626 3 7 Out-of-frame Inter-chr p12.3 q21.3 37694 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D12-IGKC TBC1D12 chr10 96162594 + IGKC chr2 89160435 - Exonic hg19 LUSC TCGA-56-8625 21 1 Out-of-frame Inter-chr q23.33 p11.2 37695 ChimerSeq STARFusion TCGA_RNA-Seq ST5-TMEM9B ST5 chr11 8832794 - TMEM9B chr11 8983730 - Exonic hg19 LUSC TCGA-56-8625 6 28 5'UTR-CDS Intra-chr p15.4 Tumor suppressor gene p15.4 Seq+ 37696 ChimerSeq STARFusion TCGA_RNA-Seq ST5-TMEM9B ST5 chr11 8832794 - TMEM9B chr11 8977845 - Exonic hg19 LUSC TCGA-56-8625 2 27 5'UTR-CDS Intra-chr p15.4 Tumor suppressor gene p15.4 Seq+ 37697 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525073 - IGHG1 chr14 106209411 - Exonic hg19 LUSC TCGA-56-8625 7 1 Out-of-frame Inter-chr q34 Oncogene q32.33 37698 ChimerSeq STARFusion TCGA_RNA-Seq PUS1-CTNNBIP1 PUS1 chr12 132416857 + CTNNBIP1 chr1 9938047 - Exonic hg19 LUSC TCGA-56-8625 2 19 CDS-5'UTR Inter-chr q24.33 p36.22 Tumor suppressor gene Seq+ 37699 ChimerSeq STARFusion TCGA_RNA-Seq ZMYND8-IGHA1 ZMYND8 chr20 45867741 - IGHA1 chr14 106175003 - Exonic hg19 LUSC TCGA-56-8625 6 1 Out-of-frame Inter-chr q13.12 37700 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-IGL@ ACTN4 chr19 39205208 + IGL@ chr22 23235960 + Exonic hg19 LUSC TCGA-56-8625 5 1 Out-of-frame Inter-chr q11.22 37701 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-IGLC1 ACTN4 chr19 39205208 + IGLC1 chr22 23235960 + Exonic hg19 LUSC TCGA-56-8625 5 1 Out-of-frame Inter-chr q11.22 37702 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-IGLL5 ACTN4 chr19 39205208 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-56-8625 5 1 Out-of-frame Inter-chr q11.22 37703 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525073 - IGHG1 chr14 106237746 - Exonic hg19 LUSC TCGA-56-8625 5 1 Out-of-frame Inter-chr q34 Oncogene q32.33 37704 ChimerSeq STARFusion TCGA_RNA-Seq GGT7-IGHG1 GGT7 chr20 33451186 - IGHG1 chr14 106209412 - Exonic hg19 LUSC TCGA-56-8625 5 1 Out-of-frame Inter-chr q11.22 q32.33 37705 ChimerSeq STARFusion TCGA_RNA-Seq SNTB2-TANGO6 SNTB2 chr16 69221649 + TANGO6 chr16 68914451 + Exonic hg19 LUSC TCGA-56-8625 2 8 Out-of-frame Intra-chr q22.1 37706 ChimerSeq STARFusion TCGA_RNA-Seq SENP2-VPS8 SENP2 chr3 185307957 + VPS8 chr3 184742124 + Exonic hg19 LUSC TCGA-56-8628 94 754 Out-of-frame Intra-chr q27.2 q27.2 Seq+ 37707 ChimerSeq STARFusion TCGA_RNA-Seq AP2M1-MAP3K13 AP2M1 chr3 183898772 + MAP3K13 chr3 185046412 + Exonic hg19 LUSC TCGA-56-8628 112 636 CDS-5'UTR Intra-chr q27.1 q27.2 Seq+ 37708 ChimerSeq STARFusion TCGA_RNA-Seq SENP2-VPS8 SENP2 chr3 185304302 + VPS8 chr3 184742124 + Exonic hg19 LUSC TCGA-56-8628 11 732 Out-of-frame Intra-chr q27.2 q27.2 Seq+ 37709 ChimerSeq STARFusion TCGA_RNA-Seq NFIX-WDR26 NFIX chr19 13136366 + WDR26 chr1 224581715 - Exonic hg19 LUSC TCGA-56-8628 5 15 In-Frame Inter-chr p13.13 Transcription factor q42.12 Seq+ 37710 ChimerSeq STARFusion TCGA_RNA-Seq DVL3-VPS8 DVL3 chr3 183888517 + VPS8 chr3 184580685 + Exonic hg19 LUSC TCGA-56-8628 3 16 Out-of-frame Intra-chr q27.1 q27.2 Seq+ 37711 ChimerSeq STARFusion TCGA_RNA-Seq RNF40-IL21R RNF40 chr16 30774880 + IL21R chr16 27441377 + Exonic hg19 LUSC TCGA-56-8629 2 22 Out-of-frame Intra-chr p11.2 p12.1 Oncogene Seq+ 37712 ChimerSeq STARFusion TCGA_RNA-Seq WASH3P-LARGE WASH3P chr15 102501844 + LARGE chr22 34046654 - Exonic hg19 LUSC TCGA-56-8629 5 7 5'UTR-CDS Inter-chr q26.3 37713 ChimerSeq STARFusion TCGA_RNA-Seq LAMA5-RBBP8NL LAMA5 chr20 60905544 - RBBP8NL chr20 60994786 - Exonic hg19 LUSC TCGA-O2-A52N 135 618 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 37714 ChimerSeq STARFusion TCGA_RNA-Seq RBP1-NMNAT3 RBP1 chr3 139237263 - NMNAT3 chr3 139299384 - Exonic hg19 LUSC TCGA-O2-A52N 4 10 CDS-5'UTR Intra-chr q23 Tumor suppressor gene q23 Seq+ 37715 ChimerSeq STARFusion TCGA_RNA-Seq HARS-TMCO6 HARS chr5 140056239 - TMCO6 chr5 140019324 + Exonic hg19 LUSC TCGA-O2-A52N 4 6 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 37716 ChimerSeq STARFusion TCGA_RNA-Seq URGCP-UPP1 URGCP chr7 43965731 - UPP1 chr7 48134360 + Exonic hg19 LUSC TCGA-O2-A52N 2 13 5'UTR-5'UTR Intra-chr p13 p12.3 Seq+ 37717 ChimerSeq STARFusion TCGA_RNA-Seq RBP1-NMNAT3 RBP1 chr3 139237263 - NMNAT3 chr3 139297897 - Exonic hg19 LUSC TCGA-O2-A52N 2 10 CDS-5'UTR Intra-chr q23 Tumor suppressor gene q23 Seq+ 37718 ChimerSeq STARFusion TCGA_RNA-Seq SREK1-ST6GAL1 SREK1 chr5 65449424 + ST6GAL1 chr3 186756530 + Exonic hg19 LUSC TCGA-79-5596 5 16 5'UTR-5'UTR Inter-chr q12.3 q27.3 Seq+ 37719 ChimerSeq STARFusion TCGA_RNA-Seq RNF217-TPD52L1 RNF217 chr6 125398004 + TPD52L1 chr6 125541224 + Exonic hg19 LUSC TCGA-79-5596 4 8 In-Frame Intra-chr q22.31 q22.31 37720 ChimerSeq STARFusion TCGA_RNA-Seq ATP10D-GABRA2 ATP10D chr4 47527659 + GABRA2 chr4 46252621 - Exonic hg19 LUSC TCGA-O2-A52V 20 79 Out-of-frame Intra-chr p12 p12 Seq+ 37721 ChimerSeq STARFusion TCGA_RNA-Seq CUL3-SPAG16 CUL3 chr2 225360549 - SPAG16 chr2 214174783 + Exonic hg19 LUSC TCGA-O2-A52V 12 72 In-Frame Intra-chr q36.2 q34 Seq+ 37722 ChimerSeq STARFusion TCGA_RNA-Seq SPAG16-CUL3 SPAG16 chr2 214162081 + CUL3 chr2 225346795 - Exonic hg19 LUSC TCGA-O2-A52V 6 59 In-Frame Intra-chr q34 q36.2 Seq+ 37723 ChimerSeq STARFusion TCGA_RNA-Seq CUL3-SPAG16 CUL3 chr2 225360549 - SPAG16 chr2 214181943 + Exonic hg19 LUSC TCGA-O2-A52V 2 69 Out-of-frame Intra-chr q36.2 q34 Seq+ 37724 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGH@ HOMER2 chr15 83561493 - IGH@ chr14 106175004 - Exonic hg19 LUSC TCGA-O2-A52V 18 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene 32.33 37725 ChimerSeq STARFusion TCGA_RNA-Seq PRIM2-NKAIN2 PRIM2 chr6 57190843 + NKAIN2 chr6 124676413 + Exonic hg19 LUSC TCGA-O2-A52V 3 24 In-Frame Intra-chr p11.2 q22.31 Seq+ 37726 ChimerSeq STARFusion TCGA_RNA-Seq ACIN1-KIAA1598 ACIN1 chr14 23559731 - KIAA1598 chr10 118700123 - Exonic hg19 LUSC TCGA-O2-A52V 4 17 Out-of-frame Inter-chr q11.2 Seq+ 37727 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57728677 + VMP1 chr17 57915656 + Exonic hg19 LUSC TCGA-O2-A52V 3 11 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 37728 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A44-SEMA4A SLC25A44 chr1 156164038 + SEMA4A chr1 156142617 + Exonic hg19 LUSC TCGA-O2-A52Q 5 45 5'UTR-CDS Intra-chr q22 q22 Seq+ 37729 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-CASC11 PVT1 chr8 128806980 + CASC11 chr8 128746205 - Exonic hg19 LUSC TCGA-O2-A52Q 7 12 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 37730 ChimerSeq STARFusion TCGA_RNA-Seq GIGYF2-C2orf82 GIGYF2 chr2 233626146 + C2orf82 chr2 233733757 + Exonic hg19 LUSC TCGA-O2-A52Q 5 11 CDS-5'UTR Intra-chr q37.1 q37.1 37731 ChimerSeq STARFusion TCGA_RNA-Seq EIF3G-ZNF560 EIF3G chr19 10227476 - ZNF560 chr19 9586045 - Exonic hg19 LUSC TCGA-O2-A52Q 2 9 CDS-5'UTR Intra-chr p13.2 p13.2 Transcription factor Seq+ 37732 ChimerSeq STARFusion TCGA_RNA-Seq RPL24-SLC9A9 RPL24 chr3 101401273 - SLC9A9 chr3 143214290 - Exonic hg19 LUSC TCGA-18-3421 13 98 In-Frame Intra-chr q12.3 q24 Seq+ 37733 ChimerSeq STARFusion TCGA_RNA-Seq RPL24-SLC9A9 RPL24 chr3 101401615 - SLC9A9 chr3 143214290 - Exonic hg19 LUSC TCGA-18-3421 2 59 Out-of-frame Intra-chr q12.3 q24 Seq+ 37734 ChimerSeq STARFusion TCGA_RNA-Seq NXF1-WDR74 NXF1 chr11 62572801 - WDR74 chr11 62607131 - Exonic hg19 LUSC TCGA-18-3421 3 26 CDS-5'UTR Intra-chr q12.3 q12.3 Seq+ 37735 ChimerSeq STARFusion TCGA_RNA-Seq TNS1-FAP TNS1 chr2 218843488 - FAP chr2 163100010 - Exonic hg19 LUSC TCGA-18-3421 5 8 Out-of-frame Intra-chr q35 q24.2 Seq+ 37736 ChimerSeq STARFusion TCGA_RNA-Seq RABEPK-PIK3R1 RABEPK chr9 127970000 + PIK3R1 chr5 67569218 + Exonic hg19 LUSC TCGA-18-3421 4 3 In-Frame Inter-chr q33.3 q13.1 Oncogene Seq+ 37737 ChimerSeq STARFusion TCGA_RNA-Seq MRPS35-PPFIBP1 MRPS35 chr12 27890541 + PPFIBP1 chr12 27840318 + Exonic hg19 LUSC TCGA-18-3421 3 6 In-Frame Intra-chr p11.22 p11.23 Seq+ 37738 ChimerSeq STARFusion TCGA_RNA-Seq DUSP14-ATP6V0A1 DUSP14 chr17 35850059 + ATP6V0A1 chr17 40629657 + Exonic hg19 LUSC TCGA-O2-A52S 139 229 5'UTR-CDS Intra-chr q12 q21.2 Seq+ 37739 ChimerSeq STARFusion TCGA_RNA-Seq DUSP14-ATP6V0A1 DUSP14 chr17 35850059 + ATP6V0A1 chr17 40629678 + Exonic hg19 LUSC TCGA-O2-A52S 34 227 5'UTR-CDS Intra-chr q12 q21.2 Seq+ 37740 ChimerSeq STARFusion TCGA_RNA-Seq TRIM16-IGL@ TRIM16 chr17 15555004 - IGL@ chr22 23247171 + Exonic hg19 LUSC TCGA-O2-A52S 30 0 Out-of-frame Inter-chr p12 q11.22 37741 ChimerSeq STARFusion TCGA_RNA-Seq TRIM16-IGLC3 TRIM16 chr17 15555000 - IGLC3 chr22 23247175 + Exonic hg19 LUSC TCGA-O2-A52S 30 0 Out-of-frame Inter-chr p12 q11.22 37742 ChimerSeq STARFusion TCGA_RNA-Seq TRIM16-IGLJ3 TRIM16 chr17 15555004 - IGLJ3 chr22 23247171 + Exonic hg19 LUSC TCGA-O2-A52S 30 0 Out-of-frame Inter-chr p12 q11.22 37743 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-HDAC5 IGH@ chr14 106641567 - HDAC5 chr17 42170131 - Exonic hg19 LUSC TCGA-O2-A52S 9 1 Out-of-frame Inter-chr 32.33 q21.31 37744 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K3-FCHSD2 MAP3K3 chr17 61710162 + FCHSD2 chr11 72726930 - Exonic hg19 LUSC TCGA-O2-A52S 4 14 In-Frame Inter-chr q23.3 STE:STE11 q13.4 Seq+ 37745 ChimerSeq STARFusion TCGA_RNA-Seq PIK3AP1-TM9SF3 PIK3AP1 chr10 98469324 - TM9SF3 chr10 98325183 - Exonic hg19 LUSC TCGA-O2-A52S 4 11 In-Frame Intra-chr q24.1 q24.1 Seq+ 37746 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-IGHA2 DHRSX chrX 2184829 - IGHA2 chr14 106054733 - Exonic hg19 LUSC TCGA-O2-A52S 6 1 Out-of-frame Inter-chr p22.33 37747 ChimerSeq STARFusion TCGA_RNA-Seq AATF-FTL AATF chr17 35378313 + FTL chr19 49468566 + Exonic hg19 LUSC TCGA-O2-A52S 3 11 CDS-5'UTR Inter-chr q13.33 Seq+ 37748 ChimerSeq STARFusion TCGA_RNA-Seq DENND4A-RAB11A DENND4A chr15 66015186 - RAB11A chr15 66018399 + Exonic hg19 LUSC TCGA-O2-A52S 3 9 CDS-5'UTR Intra-chr q22.31 q22.31 37749 ChimerSeq STARFusion TCGA_RNA-Seq MYO1D-ACACA MYO1D chr17 30932105 - ACACA chr17 35745618 - Exonic hg19 LUSC TCGA-O2-A52S 2 11 CDS-5'UTR Intra-chr q11.2 Seq+ 37750 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-COL7A1 IGH@ chr14 107034728 - COL7A1 chr3 48616670 - Exonic hg19 LUSC TCGA-60-2703 43 1 Out-of-frame Inter-chr 32.33 p21.31 37751 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R2-IGH@ PPP6R2 chr22 50874863 + IGH@ chr14 106330464 - Exonic hg19 LUSC TCGA-60-2703 20 1 Out-of-frame Inter-chr q13.33 32.33 37752 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R2-IGHG3 PPP6R2 chr22 50874863 + IGHG3 chr14 106330464 - Exonic hg19 LUSC TCGA-60-2703 20 1 Out-of-frame Inter-chr q13.33 37753 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SOD2 IGH@ chr14 107183408 - SOD2 chr6 160113828 - Exonic hg19 LUSC TCGA-60-2703 6 10 Out-of-frame Inter-chr 32.33 q25.3 Tumor suppressor gene 37754 ChimerSeq STARFusion TCGA_RNA-Seq FLII-IGH@ FLII chr17 18160512 - IGH@ chr14 106330467 - Exonic hg19 LUSC TCGA-60-2703 4 1 Out-of-frame Inter-chr 32.33 37755 ChimerSeq STARFusion TCGA_RNA-Seq FLII-IGHG3 FLII chr17 18160512 - IGHG3 chr14 106330467 - Exonic hg19 LUSC TCGA-60-2703 4 1 Out-of-frame Inter-chr 37756 ChimerSeq STARFusion TCGA_RNA-Seq COL1A1-BGN COL1A1 chr17 48269149 - BGN chrX 152771321 + Exonic hg19 LUSC TCGA-60-2703 2 4 In-Frame Inter-chr q21.33 Oncogene q28 Seq+ 37757 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-SLC25A17 MKL1 chr22 40990678 - SLC25A17 chr22 41195087 - Exonic hg19 LUSC TCGA-60-2706 10 45 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 37758 ChimerSeq STARFusion TCGA_RNA-Seq ITM2B-ESD ITM2B chr13 48807613 + ESD chr13 47367579 - Exonic hg19 LUSC TCGA-60-2706 6 47 CDS-5'UTR Intra-chr q14.2 q14.2 Seq+ 37759 ChimerSeq STARFusion TCGA_RNA-Seq ELL-CRLF1 ELL chr19 18632731 - CRLF1 chr19 18710656 - Exonic hg19 LUSC TCGA-60-2706 5 50 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 37760 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-SLC25A17 MKL1 chr22 41032482 - SLC25A17 chr22 41195087 - Exonic hg19 LUSC TCGA-60-2706 4 44 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 37761 ChimerSeq STARFusion TCGA_RNA-Seq PCNX-TTC9 PCNX chr14 71374720 + TTC9 chr14 71134281 + Exonic hg19 LUSC TCGA-60-2706 4 30 Out-of-frame Intra-chr q24.2 37762 ChimerSeq STARFusion TCGA_RNA-Seq FOXO1-ELF1 FOXO1 chr13 41239720 - ELF1 chr13 41533152 - Exonic hg19 LUSC TCGA-60-2706 6 13 In-Frame Intra-chr q14.11 Oncogene Tumor suppressor gene Transcription factor q14.11 Transcription factor Seq+ 37763 ChimerSeq STARFusion TCGA_RNA-Seq RBM12B-RSPO2 RBM12B chr8 94752857 - RSPO2 chr8 109001472 - Exonic hg19 LUSC TCGA-60-2706 2 26 5'UTR-CDS Intra-chr q22.1 q23.1 Seq+ 37764 ChimerSeq STARFusion TCGA_RNA-Seq RBM12B-RSPO2 RBM12B chr8 94753109 - RSPO2 chr8 109001472 - Exonic hg19 LUSC TCGA-60-2706 2 26 5'UTR-CDS Intra-chr q22.1 q23.1 Seq+ 37765 ChimerSeq STARFusion TCGA_RNA-Seq ZNF557-SIGLECL1 ZNF557 chr19 7076518 + SIGLECL1 chr19 51771825 + Exonic hg19 LUSC TCGA-60-2706 4 13 Out-of-frame Intra-chr p13.2 Transcription factor q13.41 Seq+ 37766 ChimerSeq STARFusion TCGA_RNA-Seq MSH6-TEKT4P2 MSH6 chr2 48010632 + TEKT4P2 chr21 9966380 - Exonic hg19 LUSC TCGA-60-2706 4 12 CDS-3'UTR Inter-chr p16.3 Oncogene p11.2 Seq+ 37767 ChimerSeq STARFusion TCGA_RNA-Seq ABRACL-MAP3K5 ABRACL chr6 139350012 + MAP3K5 chr6 137041727 - Exonic hg19 LUSC TCGA-60-2706 3 13 5'UTR-CDS Intra-chr q24.1 q23.3 STE:STE11 Seq+ 37768 ChimerSeq STARFusion TCGA_RNA-Seq ZNF714-SIGLECL1 ZNF714 chr19 21266875 + SIGLECL1 chr19 51771825 + Exonic hg19 LUSC TCGA-60-2706 3 11 Out-of-frame Intra-chr p12 Transcription factor q13.41 37769 ChimerSeq STARFusion TCGA_RNA-Seq PSMD11-RHOT1 PSMD11 chr17 30781637 + RHOT1 chr17 30580104 + Exonic hg19 LUSC TCGA-60-2706 3 9 CDS-3'UTR Intra-chr q11.2 q11.2 Seq+ 37770 ChimerSeq STARFusion TCGA_RNA-Seq TRIM65-SRP68 TRIM65 chr17 73887894 - SRP68 chr17 74053624 - Exonic hg19 LUSC TCGA-60-2706 3 8 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 37771 ChimerSeq STARFusion TCGA_RNA-Seq RNF19A-TRIQK RNF19A chr8 101299729 - TRIQK chr8 93929238 - Exonic hg19 LUSC TCGA-60-2706 3 7 CDS-5'UTR Intra-chr q22.2 q22.1 Seq+ 37772 ChimerSeq STARFusion TCGA_RNA-Seq HCFC1-IGHG3 HCFC1 chrX 153222122 - IGHG3 chr14 106237746 - Exonic hg19 LUSC TCGA-60-2704 38 1 Out-of-frame Inter-chr q28 37773 ChimerSeq STARFusion TCGA_RNA-Seq TNKS1BP1-IGHG1 TNKS1BP1 chr11 57067183 - IGHG1 chr14 106209409 - Exonic hg19 LUSC TCGA-60-2704 11 3 Out-of-frame Inter-chr q12.1 q32.33 37774 ChimerSeq STARFusion TCGA_RNA-Seq SLC20A2-ZMAT4 SLC20A2 chr8 42358549 - ZMAT4 chr8 40389757 - Exonic hg19 LUSC TCGA-60-2708 28 82 5'UTR-CDS Intra-chr p11.21 p11.21 Transcription factor Seq+ 37775 ChimerSeq STARFusion TCGA_RNA-Seq SLC20A2-ZMAT4 SLC20A2 chr8 42396681 - ZMAT4 chr8 40389757 - Exonic hg19 LUSC TCGA-60-2708 6 82 5'UTR-CDS Intra-chr p11.21 p11.21 Transcription factor Seq+ 37776 ChimerSeq STARFusion TCGA_RNA-Seq DERA-MGST1 DERA chr12 16115881 + MGST1 chr12 16742462 + Exonic hg19 LUSC TCGA-60-2708 6 3 CDS-3'UTR Intra-chr p12.3 p12.3 Seq+ 37777 ChimerSeq STARFusion TCGA_RNA-Seq PCAT1-CASC8 PCAT1 chr8 128018863 + CASC8 chr8 128302305 - Exonic hg19 LUSC TCGA-60-2708 4 11 Out-of-frame Intra-chr q24.21 q24.21 37778 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CDC42SE1 IGH@ chr14 107210935 - CDC42SE1 chr1 151027514 - Exonic hg19 LUSC TCGA-60-2709 303 10 Out-of-frame Inter-chr 32.33 q21.3 37779 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CDC42SE1 IGH@ chr14 107198935 - CDC42SE1 chr1 151027514 - Exonic hg19 LUSC TCGA-60-2709 166 5 Out-of-frame Inter-chr 32.33 q21.3 37780 ChimerSeq STARFusion TCGA_RNA-Seq SEMA3F-IGHG3 SEMA3F chr3 50220362 + IGHG3 chr14 106237745 - Exonic hg19 LUSC TCGA-60-2709 29 1 Out-of-frame Inter-chr p21.31 Tumor suppressor gene 37781 ChimerSeq STARFusion TCGA_RNA-Seq SMC1A-UBQLN2 SMC1A chrX 53431923 - UBQLN2 chrX 56591223 + Exonic hg19 LUSC TCGA-60-2709 11 43 Out-of-frame Intra-chr p11.22 p11.21 Seq+ 37782 ChimerSeq STARFusion TCGA_RNA-Seq NRBP1-IGHG1 NRBP1 chr2 27664674 + IGHG1 chr14 106209410 - Exonic hg19 LUSC TCGA-60-2709 7 2 Out-of-frame Inter-chr p23.3 Other:NRBP Tumor suppressor gene q32.33 37783 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA1-BTBD16 PLEKHA1 chr10 124159904 + BTBD16 chr10 124049424 + Exonic hg19 LUSC TCGA-33-AASJ 8 77 In-Frame Intra-chr q26.13 q26.13 Seq+ 37784 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA1-BTBD16 PLEKHA1 chr10 124159904 + BTBD16 chr10 124043366 + Exonic hg19 LUSC TCGA-33-AASJ 6 74 Out-of-frame Intra-chr q26.13 q26.13 Seq+ 37785 ChimerSeq STARFusion TCGA_RNA-Seq SAMD12-CASC8 SAMD12 chr8 119391799 - CASC8 chr8 128302305 - Exonic hg19 LUSC TCGA-33-AASJ 9 40 Out-of-frame Intra-chr q24.12 q24.21 Seq+ 37786 ChimerSeq STARFusion TCGA_RNA-Seq AGPS-HNRNPA3 AGPS chr2 178326746 + HNRNPA3 chr2 178083765 + Exonic hg19 LUSC TCGA-33-AASJ 4 8 Out-of-frame Intra-chr q31.2 q31.2 37787 ChimerSeq STARFusion TCGA_RNA-Seq GPNMB-KLHL7 GPNMB chr7 23313233 + KLHL7 chr7 23163396 + Exonic hg19 LUSC TCGA-34-2596 8 38 Out-of-frame Intra-chr p15.3 p15.3 Seq+ 37788 ChimerSeq STARFusion TCGA_RNA-Seq IGHGP-TINAGL1 IGHGP chr14 106134591 - TINAGL1 chr1 32052503 + Exonic hg19 LUSC TCGA-34-2596 17 1 Out-of-frame Inter-chr p35.2 37789 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGH@ INTS1 chr7 1511982 - IGH@ chr14 106209411 - Exonic hg19 LUSC TCGA-34-2596 8 1 Out-of-frame Inter-chr p22.3 32.33 37790 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGHG1 INTS1 chr7 1511982 - IGHG1 chr14 106209411 - Exonic hg19 LUSC TCGA-34-2596 8 1 Out-of-frame Inter-chr p22.3 q32.33 37791 ChimerSeq STARFusion TCGA_RNA-Seq LRP1-IGH@ LRP1 chr12 57604231 + IGH@ chr14 106330069 - Exonic hg19 LUSC TCGA-34-2596 6 2 Out-of-frame Inter-chr q13.3 32.33 37792 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG4 STK25 chr2 242434915 - IGHG4 chr14 106136184 - Exonic hg19 LUSC TCGA-63-7021 77 1 Out-of-frame Inter-chr q37.3 37793 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG4 STK25 chr2 242434915 - IGHG4 chr14 106111129 - Exonic hg19 LUSC TCGA-63-7021 14 1 Out-of-frame Inter-chr q37.3 37794 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGHG3 HOMER2 chr15 83561493 - IGHG3 chr14 106237745 - Exonic hg19 LUSC TCGA-63-7021 11 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene 37795 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG4 STK25 chr2 242434915 - IGHG4 chr14 106092405 - Exonic hg19 LUSC TCGA-63-7021 11 1 Out-of-frame Inter-chr q37.3 37796 ChimerSeq STARFusion TCGA_RNA-Seq EXOC6-FFAR4 EXOC6 chr10 94594581 + FFAR4 chr10 95346977 + Exonic hg19 LUSC TCGA-63-7021 2 36 Out-of-frame Intra-chr q23.33 q23.33 Seq+ 37797 ChimerSeq STARFusion TCGA_RNA-Seq KIF11-EXOC6 KIF11 chr10 94399657 + EXOC6 chr10 94594470 + Exonic hg19 LUSC TCGA-63-7021 9 6 CDS-5'UTR Intra-chr q23.33 q23.33 37798 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB2-IGKC DNAJB2 chr2 220151425 + IGKC chr2 89156807 - Exonic hg19 LUSC TCGA-63-7021 8 1 Out-of-frame Intra-chr q35 p11.2 37799 ChimerSeq STARFusion TCGA_RNA-Seq SEMA4B-IGL@ SEMA4B chr15 90772299 + IGL@ chr22 23243491 + Exonic hg19 LUSC TCGA-63-7021 6 3 Out-of-frame Inter-chr q26.1 q11.22 37800 ChimerSeq STARFusion TCGA_RNA-Seq KIF11-FFAR4 KIF11 chr10 94399657 + FFAR4 chr10 95346977 + Exonic hg19 LUSC TCGA-63-7021 3 9 Out-of-frame Intra-chr q23.33 q23.33 Seq+ 37801 ChimerSeq STARFusion TCGA_RNA-Seq CCDC37-BCAM CCDC37 chr3 126152027 + BCAM chr19 45322836 + Exonic hg19 LUSC TCGA-63-7020 5 0 Out-of-frame Inter-chr q13.32 37802 ChimerSeq STARFusion TCGA_RNA-Seq RNLS-LINC00864 RNLS chr10 90122309 - LINC00864 chr10 89157957 - Exonic hg19 LUSC TCGA-63-7020 3 8 Out-of-frame Intra-chr q23.31 q23.2 37803 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-MARCH10 BCAS3 chr17 59024713 + 2019_ 3_ 10_ chr17 60837367 - Exonic hg19 LUSC TCGA-63-7023 24 99 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 37804 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1467-EMP1 KIAA1467 chr12 13229077 + EMP1 chr12 13364403 + Exonic hg19 LUSC TCGA-63-7023 2 8 CDS-5'UTR Intra-chr p13.1 Tumor suppressor gene 37805 ChimerSeq STARFusion TCGA_RNA-Seq SOAT2-IGHG3 SOAT2 chr12 53517616 + IGHG3 chr14 106237745 - Exonic hg19 LUSC TCGA-63-7022 37 0 Out-of-frame Inter-chr q13.13 37806 ChimerSeq STARFusion TCGA_RNA-Seq HSPG2-IGHG1 HSPG2 chr1 22176639 - IGHG1 chr14 106209407 - Exonic hg19 LUSC TCGA-63-7022 17 8 Out-of-frame Inter-chr p36.12 q32.33 37807 ChimerSeq STARFusion TCGA_RNA-Seq TSEN54-IGLC3 TSEN54 chr17 73519291 + IGLC3 chr22 23248512 + Exonic hg19 LUSC TCGA-63-7022 15 1 Out-of-frame Inter-chr q25.1 q11.22 37808 ChimerSeq STARFusion TCGA_RNA-Seq HSPG2-IGHG1 HSPG2 chr1 22176639 - IGHG1 chr14 106237742 - Exonic hg19 LUSC TCGA-63-7022 13 8 Out-of-frame Inter-chr p36.12 q32.33 37809 ChimerSeq STARFusion TCGA_RNA-Seq NPC2-IGLC2 NPC2 chr14 74959952 - IGLC2 chr22 23241805 + Exonic hg19 LUSC TCGA-63-7022 13 1 Out-of-frame Inter-chr q24.3 q11.22 37810 ChimerSeq STARFusion TCGA_RNA-Seq WDR1-IGHA2 WDR1 chr4 10076260 - IGHA2 chr14 106054736 - Exonic hg19 LUSC TCGA-63-7022 13 1 Out-of-frame Inter-chr p16.1 37811 ChimerSeq STARFusion TCGA_RNA-Seq TSEN54-IGLC3 TSEN54 chr17 73519291 + IGLC3 chr22 23243156 + Exonic hg19 LUSC TCGA-63-7022 12 1 Out-of-frame Inter-chr q25.1 q11.22 37812 ChimerSeq STARFusion TCGA_RNA-Seq PLXDC2-IGKJ4 PLXDC2 chr10 20570636 + IGKJ4 chr2 89160434 - Exonic hg19 LUSC TCGA-63-7022 11 1 Out-of-frame Inter-chr p12.31 p11.2 37813 ChimerSeq STARFusion TCGA_RNA-Seq IGHGP-FBN3 IGHGP chr14 106134592 - FBN3 chr19 8138054 - Exonic hg19 LUSC TCGA-63-7022 10 0 Out-of-frame Inter-chr p13.2 37814 ChimerSeq STARFusion TCGA_RNA-Seq ITGB5-IGLC2 ITGB5 chr3 124485084 - IGLC2 chr22 23243154 + Exonic hg19 LUSC TCGA-63-7022 7 1 Out-of-frame Inter-chr q21.2 q11.22 37815 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSD1 PRSS27 chr16 2763530 - TPSD1 chr16 1308333 + Exonic hg19 LUSC TCGA-63-7022 6 2 In-Frame Intra-chr p13.3 p13.3 37816 ChimerSeq STARFusion TCGA_RNA-Seq IGHG3-DOCK8 IGHG3 chr14 106179367 - DOCK8 chr9 214920 + Exonic hg19 LUSC TCGA-63-7022 6 1 Out-of-frame Inter-chr p24.3 37817 ChimerSeq STARFusion TCGA_RNA-Seq HGSNAT-AGPAT6 HGSNAT chr8 43024385 + AGPAT6 chr8 41466935 + Exonic hg19 LUSC TCGA-63-7022 3 11 In-Frame Intra-chr p11.21 Seq+ 37818 ChimerSeq STARFusion TCGA_RNA-Seq FAM98C-BLVRB FAM98C chr19 38894334 + BLVRB chr19 40964452 - Exonic hg19 LUSC TCGA-LA-A7SW 85 146 In-Frame Intra-chr q13.2 q13.2 Seq+ 37819 ChimerSeq STARFusion TCGA_RNA-Seq ATP5L-UBE4A ATP5L chr11 118277812 + UBE4A chr11 118267029 + Exonic hg19 LUSC TCGA-LA-A7SW 33 62 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 37820 ChimerSeq STARFusion TCGA_RNA-Seq EIF2S2-ADRA1D EIF2S2 chr20 32678323 - ADRA1D chr20 4202777 - Exonic hg19 LUSC TCGA-LA-A7SW 31 52 In-Frame Intra-chr q11.22 p13 Seq+ 37821 ChimerSeq STARFusion TCGA_RNA-Seq SLBP-LETM1 SLBP chr4 1713601 - LETM1 chr4 1817529 - Exonic hg19 LUSC TCGA-LA-A7SW 20 63 In-Frame Intra-chr p16.3 p16.3 Seq+ 37822 ChimerSeq STARFusion TCGA_RNA-Seq ROCK1-CDH2 ROCK1 chr18 18571137 - CDH2 chr18 25532323 - Exonic hg19 LUSC TCGA-LA-A7SW 18 61 Out-of-frame Intra-chr q11.1 AGC:DMPK q12.1 Oncogene Seq+ 37823 ChimerSeq STARFusion TCGA_RNA-Seq PCNXL3-PACS1 PCNXL3 chr11 65391115 + PACS1 chr11 66006275 + Exonic hg19 LUSC TCGA-LA-A7SW 17 53 In-Frame Intra-chr q13.1 Seq+ 37824 ChimerSeq STARFusion TCGA_RNA-Seq POLA2-CAPN1 POLA2 chr11 65029842 + CAPN1 chr11 64972154 + Exonic hg19 LUSC TCGA-LA-A7SW 17 38 In-Frame Intra-chr q13.1 q13.1 Seq+ 37825 ChimerSeq STARFusion TCGA_RNA-Seq URM1-C9orf3 URM1 chr9 131133694 + C9orf3 chr9 97822976 + Exonic hg19 LUSC TCGA-LA-A7SW 12 22 Out-of-frame Intra-chr q34.11 q22.32 Seq+ 37826 ChimerSeq STARFusion TCGA_RNA-Seq BTBD10-PTH BTBD10 chr11 13484639 - PTH chr11 13517720 - Exonic hg19 LUSC TCGA-LA-A7SW 7 41 5'UTR-5'UTR Intra-chr p15.3 p15.3 Seq+ 37827 ChimerSeq STARFusion TCGA_RNA-Seq EIF2S2-ADRA1D EIF2S2 chr20 32681481 - ADRA1D chr20 4202777 - Exonic hg19 LUSC TCGA-LA-A7SW 4 52 Out-of-frame Intra-chr q11.22 p13 Seq+ 37828 ChimerSeq STARFusion TCGA_RNA-Seq CTCF-E2F4 CTCF chr16 67605167 + E2F4 chr16 67228589 + Exonic hg19 LUSC TCGA-LA-A7SW 9 19 5'UTR-CDS Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 Transcription factor Seq+ 37829 ChimerSeq STARFusion TCGA_RNA-Seq BTBD10-PTH BTBD10 chr11 13484639 - PTH chr11 13514407 - Exonic hg19 LUSC TCGA-LA-A7SW 2 41 5'UTR-5'UTR Intra-chr p15.3 p15.3 Seq+ 37830 ChimerSeq STARFusion TCGA_RNA-Seq FAM73A-IFI44L FAM73A chr1 78280916 + IFI44L chr1 79106706 + Exonic hg19 LUSC TCGA-LA-A7SW 2 35 In-Frame Intra-chr p31.1 37831 ChimerSeq STARFusion TCGA_RNA-Seq TSC2-MAPK8IP3 TSC2 chr16 2136872 + MAPK8IP3 chr16 1809959 + Exonic hg19 LUSC TCGA-LA-A7SW 7 9 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 37832 ChimerSeq STARFusion TCGA_RNA-Seq MAP4K5-ATP5S MAP4K5 chr14 50941795 - ATP5S chr14 50788201 + Exonic hg19 LUSC TCGA-LA-A7SW 2 28 Out-of-frame Intra-chr q22.1 q21.3 Seq+ 37833 ChimerSeq STARFusion TCGA_RNA-Seq CERS5-LIMA1 CERS5 chr12 50560884 - LIMA1 chr12 50575820 - Exonic hg19 LUSC TCGA-LA-A7SW 4 19 Out-of-frame Intra-chr q13.12 q13.12 Tumor suppressor gene Seq+ 37834 ChimerSeq STARFusion TCGA_RNA-Seq MNAT1-AP5M1 MNAT1 chr14 61346553 + AP5M1 chr14 57740962 + Exonic hg19 LUSC TCGA-LA-A7SW 4 14 In-Frame Intra-chr q23.1 q22.3 Seq+ 37835 ChimerSeq STARFusion TCGA_RNA-Seq ST6GALNAC3-AK5 ST6GALNAC3 chr1 76540569 + AK5 chr1 77949002 + Exonic hg19 LUSC TCGA-LA-A7SW 3 10 In-Frame Intra-chr p31.1 p31.1 Seq+ 37836 ChimerSeq STARFusion TCGA_RNA-Seq KPNA6-ZCCHC17 KPNA6 chr1 32573735 + ZCCHC17 chr1 31791956 + Exonic hg19 LUSC TCGA-LA-A7SW 3 9 Out-of-frame Intra-chr p35.2 p35.2 Seq+ 37837 ChimerSeq STARFusion TCGA_RNA-Seq ALOX12P2-FBXO39 ALOX12P2 chr17 6803304 + FBXO39 chr17 6690099 + Exonic hg19 LUSC TCGA-LA-A7SW 4 4 5'UTR-CDS Intra-chr p13.1 p13.1 Seq+ 37838 ChimerSeq STARFusion TCGA_RNA-Seq SCLT1-C4orf33 SCLT1 chr4 130003461 - C4orf33 chr4 130023757 + Exonic hg19 LUSC TCGA-LA-A7SW 3 7 CDS-5'UTR Intra-chr q28.2 q28.2 37839 ChimerSeq STARFusion TCGA_RNA-Seq PHF21A-CKAP5 PHF21A chr11 45986866 - CKAP5 chr11 46804918 - Exonic hg19 LUSC TCGA-LA-A7SW 2 8 In-Frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 37840 ChimerSeq STARFusion TCGA_RNA-Seq SEPT10-SH3RF3 SEPT10 chr2 110310664 - SH3RF3 chr2 110015046 + Exonic hg19 LUSC TCGA-LA-A7SW 2 7 In-Frame Intra-chr q13 q13 Seq+ 37841 ChimerSeq STARFusion TCGA_RNA-Seq ZNF652-PHB ZNF652 chr17 47439775 - PHB chr17 47490653 - Exonic hg19 LUSC TCGA-LA-A7SW 2 6 5'UTR-5'UTR Intra-chr q21.33 Transcription factor q21.33 Tumor suppressor gene Seq+ 37842 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3B-SLC7A14 FNDC3B chr3 171757561 + SLC7A14 chr3 170204157 - Exonic hg19 LUSC TCGA-51-6867 78 286 5'UTR-CDS Intra-chr q26.31 q26.2 Seq+ 37843 ChimerSeq STARFusion TCGA_RNA-Seq DLG1-WDR53 DLG1 chr3 197009550 - WDR53 chr3 196288362 - Exonic hg19 LUSC TCGA-51-6867 50 254 CDS-5'UTR Intra-chr q29 Tumor suppressor gene q29 Seq+ 37844 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3B-SLC7A14 FNDC3B chr3 171758414 + SLC7A14 chr3 170204157 - Exonic hg19 LUSC TCGA-51-6867 35 286 5'UTR-CDS Intra-chr q26.31 q26.2 Seq+ 37845 ChimerSeq STARFusion TCGA_RNA-Seq DLG1-WDR53 DLG1 chr3 197009550 - WDR53 chr3 196281678 - Exonic hg19 LUSC TCGA-51-6867 24 254 In-Frame Intra-chr q29 Tumor suppressor gene q29 Seq+ 37846 ChimerSeq STARFusion TCGA_RNA-Seq TFG-TFDP2 TFG chr3 100438902 + TFDP2 chr3 141663880 - Exonic hg19 LUSC TCGA-51-6867 30 102 CDS-3'UTR Intra-chr q12.2 q23 Transcription factor Seq+ 37847 ChimerSeq STARFusion TCGA_RNA-Seq PAK2-BDH1 PAK2 chr3 196467028 + BDH1 chr3 197260432 - Exonic hg19 LUSC TCGA-51-6867 12 15 5'UTR-CDS Intra-chr q29 STE:STE20 Seq+ 37848 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT5-ZFP64 B4GALT5 chr20 48330113 - ZFP64 chr20 50769967 - Exonic hg19 LUSC TCGA-51-6867 6 10 In-Frame Intra-chr q13.13 q13.2 Transcription factor Seq+ 37849 ChimerSeq STARFusion TCGA_RNA-Seq TPD52L1-RNF217 TPD52L1 chr6 125475116 + RNF217 chr6 125366357 + Exonic hg19 LUSC TCGA-51-6867 2 25 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 37850 ChimerSeq STARFusion TCGA_RNA-Seq GALNT2-EYS GALNT2 chr1 230203153 + EYS chr6 64436573 - Exonic hg19 LUSC TCGA-51-6867 7 4 Out-of-frame Inter-chr q42.13 q12 Seq+ 37851 ChimerSeq STARFusion TCGA_RNA-Seq XPR1-FCGR3A XPR1 chr1 180601406 + FCGR3A chr1 161514748 - Exonic hg19 LUSC TCGA-51-6867 5 11 Out-of-frame Intra-chr q25.3 q23.3 Seq+ 37852 ChimerSeq STARFusion TCGA_RNA-Seq XPR1-FCGR3B XPR1 chr1 180601406 + FCGR3B chr1 161596192 - Exonic hg19 LUSC TCGA-51-6867 5 11 Out-of-frame Intra-chr q25.3 q23.3 37853 ChimerSeq STARFusion TCGA_RNA-Seq PPP1CB-DRAM1 PPP1CB chr2 29016863 + DRAM1 chr12 102405591 + Exonic hg19 LUSC TCGA-51-6867 3 15 CDS-3'UTR Inter-chr p23.2 q23.2 Seq+ 37854 ChimerSeq STARFusion TCGA_RNA-Seq SPDYA-DRAM1 SPDYA chr2 29016863 + DRAM1 chr12 102405591 + Exonic hg19 LUSC TCGA-51-6867 3 15 Out-of-frame Inter-chr p23.2 q23.2 Seq+ 37855 ChimerSeq STARFusion TCGA_RNA-Seq XPR1-FCGR3A XPR1 chr1 180601406 + FCGR3A chr1 161596192 - Exonic hg19 LUSC TCGA-51-6867 4 11 CDS-5'UTR Intra-chr q25.3 q23.3 Seq+ 37856 ChimerSeq STARFusion TCGA_RNA-Seq ICAM1-HNRNPM ICAM1 chr19 10385704 + HNRNPM chr19 8550487 + Exonic hg19 LUSC TCGA-77-7338 42 94 In-Frame Intra-chr p13.2 p13.2 Seq+ 37857 ChimerSeq STARFusion TCGA_RNA-Seq EIF3K-PPP2R2A EIF3K chr19 39116742 + PPP2R2A chr8 26227650 + Exonic hg19 LUSC TCGA-77-7338 20 45 Out-of-frame Inter-chr p21.2 Seq+ 37858 ChimerSeq STARFusion TCGA_RNA-Seq EIF3K-PPP2R2A EIF3K chr19 39116742 + PPP2R2A chr8 26223831 + Exonic hg19 LUSC TCGA-77-7338 2 45 In-Frame Inter-chr p21.2 Seq+ 37859 ChimerSeq STARFusion TCGA_RNA-Seq CCDC117-HSCB CCDC117 chr22 29169766 + HSCB chr22 29141852 + Exonic hg19 LUSC TCGA-77-7338 2 6 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 37860 ChimerSeq STARFusion TCGA_RNA-Seq CCDC117-HSCB CCDC117 chr22 29169766 + HSCB chr22 29147229 + Exonic hg19 LUSC TCGA-77-7338 2 6 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 37861 ChimerSeq STARFusion TCGA_RNA-Seq AMOTL1-IGL@ AMOTL1 chr11 94533377 + IGL@ chr22 23247172 + Exonic hg19 LUSC TCGA-18-4721 35 2 Out-of-frame Inter-chr q21 q11.22 37862 ChimerSeq STARFusion TCGA_RNA-Seq AMOTL1-IGLC3 AMOTL1 chr11 94533377 + IGLC3 chr22 23247172 + Exonic hg19 LUSC TCGA-18-4721 35 1 Out-of-frame Inter-chr q21 q11.22 37863 ChimerSeq STARFusion TCGA_RNA-Seq AMOTL1-IGL@ AMOTL1 chr11 94533377 + IGL@ chr22 23241802 + Exonic hg19 LUSC TCGA-18-4721 21 2 Out-of-frame Inter-chr q21 q11.22 37864 ChimerSeq STARFusion TCGA_RNA-Seq AMOTL1-IGLC3 AMOTL1 chr11 94533377 + IGLC3 chr22 23241802 + Exonic hg19 LUSC TCGA-18-4721 21 1 Out-of-frame Inter-chr q21 q11.22 37865 ChimerSeq STARFusion TCGA_RNA-Seq ACIN1-HAUS4 ACIN1 chr14 23547360 - HAUS4 chr14 23424385 - Exonic hg19 LUSC TCGA-18-4721 7 36 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 37866 ChimerSeq STARFusion TCGA_RNA-Seq ITFG2-TULP3 ITFG2 chr12 2922022 + TULP3 chr12 3046797 + Exonic hg19 LUSC TCGA-18-4721 9 28 In-Frame Intra-chr p13.33 p13.33 Seq+ 37867 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-NOTCH1 IGH@ chr14 106134590 - NOTCH1 chr9 139403428 - Exonic hg19 LUSC TCGA-18-4721 9 3 Out-of-frame Inter-chr 32.33 q34.3 Oncogene Tumor suppressor gene 37868 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-NOTCH1 IGHG1 chr14 106134590 - NOTCH1 chr9 139403428 - Exonic hg19 LUSC TCGA-18-4721 9 2 Out-of-frame Inter-chr q32.33 q34.3 Oncogene Tumor suppressor gene 37869 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L2-PDE11A NFE2L2 chr2 178097120 - PDE11A chr2 178634101 - Exonic hg19 LUSC TCGA-18-4721 4 16 In-Frame Intra-chr q31.2 Oncogene Transcription factor q31.2 Seq+ 37870 ChimerSeq STARFusion TCGA_RNA-Seq AMOTL1-IGL@ AMOTL1 chr11 94533377 + IGL@ chr22 23235965 + Exonic hg19 LUSC TCGA-18-4721 6 2 Out-of-frame Inter-chr q21 q11.22 37871 ChimerSeq STARFusion TCGA_RNA-Seq AMOTL1-IGLC3 AMOTL1 chr11 94533377 + IGLC3 chr22 23235965 + Exonic hg19 LUSC TCGA-18-4721 6 1 Out-of-frame Inter-chr q21 q11.22 37872 ChimerSeq STARFusion TCGA_RNA-Seq NFX1-ACO1 NFX1 chr9 33351788 + ACO1 chr9 32440463 + Exonic hg19 LUSC TCGA-18-4721 3 8 In-Frame Intra-chr p13.3 Transcription factor p21.1 Seq+ 37873 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGH@ HOMER2 chr15 83561493 - IGH@ chr14 106175004 - Exonic hg19 LUSC TCGA-18-4721 4 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene 32.33 37874 ChimerSeq STARFusion TCGA_RNA-Seq PLGRKT-RLN2 PLGRKT chr9 5431897 - RLN2 chr9 5305748 - Exonic hg19 LUSC TCGA-18-4721 3 5 CDS-5'UTR Intra-chr p24.1 p24.1 37875 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-DDX50 IGH@ chr14 106691672 - DDX50 chr10 70694601 + Exonic hg19 LUSC TCGA-18-4721 3 0 Out-of-frame Inter-chr 32.33 q22.1 37876 ChimerSeq STARFusion TCGA_RNA-Seq GART-TMEM50B GART chr21 34914371 - TMEM50B chr21 34811604 - Exonic hg19 LUSC TCGA-77-7337 7 3 5'UTR-3'UTR Intra-chr Seq+ 37877 ChimerSeq STARFusion TCGA_RNA-Seq CACYBP-RABGAP1L CACYBP chr1 174969331 + RABGAP1L chr1 174938414 + Exonic hg19 LUSC TCGA-77-7337 3 9 In-Frame Intra-chr q25.1 q25.1 Seq+ 37878 ChimerSeq STARFusion TCGA_RNA-Seq PRX-IGL@ PRX chr19 40904222 - IGL@ chr22 23247170 + Exonic hg19 LUSC TCGA-22-1002 39 1 Out-of-frame Inter-chr q13.2 q11.22 37879 ChimerSeq STARFusion TCGA_RNA-Seq TMEM11-IGH@ TMEM11 chr17 21101249 - IGH@ chr14 106329460 - Exonic hg19 LUSC TCGA-22-1002 7 1 Out-of-frame Inter-chr p11.2 32.33 37880 ChimerSeq STARFusion TCGA_RNA-Seq MEGF8-IGHA1 MEGF8 chr19 42880499 + IGHA1 chr14 106175004 - Exonic hg19 LUSC TCGA-22-1002 6 1 Out-of-frame Inter-chr q13.2 37881 ChimerSeq STARFusion TCGA_RNA-Seq TMEM45A-LNP1 TMEM45A chr3 100238452 + LNP1 chr3 100148541 + Exonic hg19 LUSC TCGA-22-1005 16 64 5'UTR-5'UTR Intra-chr q12.2 q12.2 Seq+ 37882 ChimerSeq STARFusion TCGA_RNA-Seq HCFC1-IGHG2 HCFC1 chrX 153222118 - IGHG2 chr14 106111126 - Exonic hg19 LUSC TCGA-22-1005 24 0 Out-of-frame Inter-chr q28 37883 ChimerSeq STARFusion TCGA_RNA-Seq IGHGP-FBN3 IGHGP chr14 106134592 - FBN3 chr19 8138054 - Exonic hg19 LUSC TCGA-22-1005 23 0 Out-of-frame Inter-chr p13.2 37884 ChimerSeq STARFusion TCGA_RNA-Seq ITGB6-RBMS1 ITGB6 chr2 161055690 - RBMS1 chr2 161141555 - Exonic hg19 LUSC TCGA-22-1005 14 31 In-Frame Intra-chr q24.2 q24.2 Seq+ 37885 ChimerSeq STARFusion TCGA_RNA-Seq TMEM45A-LNP1 TMEM45A chr3 100211772 + LNP1 chr3 100148541 + Exonic hg19 LUSC TCGA-22-1005 5 64 5'UTR-5'UTR Intra-chr q12.2 q12.2 Seq+ 37886 ChimerSeq STARFusion TCGA_RNA-Seq TMEM45A-LNP1 TMEM45A chr3 100238452 + LNP1 chr3 100170563 + Exonic hg19 LUSC TCGA-22-1005 2 64 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 37887 ChimerSeq STARFusion TCGA_RNA-Seq WDR1-IGHG2 WDR1 chr4 10076256 - IGHG2 chr14 106111127 - Exonic hg19 LUSC TCGA-22-1005 15 2 Out-of-frame Inter-chr p16.1 37888 ChimerSeq STARFusion TCGA_RNA-Seq VASP-IGHG3 VASP chr19 46027902 + IGHG3 chr14 106330065 - Exonic hg19 LUSC TCGA-22-1005 14 1 Out-of-frame Inter-chr q13.32 37889 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-CATSPERG ACTN4 chr19 39200116 + CATSPERG chr19 38848918 + Exonic hg19 LUSC TCGA-22-1005 2 46 In-Frame Intra-chr q13.2 Seq+ 37890 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-CATSPERG ACTN4 chr19 39200116 + CATSPERG chr19 38834220 + Exonic hg19 LUSC TCGA-22-1005 2 45 Out-of-frame Intra-chr q13.2 Seq+ 37891 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-CATSPERG ACTN4 chr19 39200116 + CATSPERG chr19 38834289 + Exonic hg19 LUSC TCGA-22-1005 2 45 Out-of-frame Intra-chr q13.2 Seq+ 37892 ChimerSeq STARFusion TCGA_RNA-Seq KRT82-IGKJ3 KRT82 chr12 52797597 - IGKJ3 chr2 89160765 - Exonic hg19 LUSC TCGA-22-1005 12 0 Out-of-frame Inter-chr q13.13 p11.2 37893 ChimerSeq STARFusion TCGA_RNA-Seq KRT82-IGKJ4 KRT82 chr12 52797597 - IGKJ4 chr2 89160430 - Exonic hg19 LUSC TCGA-22-1005 10 0 Out-of-frame Inter-chr q13.13 p11.2 37894 ChimerSeq STARFusion TCGA_RNA-Seq VASP-IGHG3 VASP chr19 46027900 + IGHG3 chr14 106330468 - Exonic hg19 LUSC TCGA-22-1005 7 1 Out-of-frame Inter-chr q13.32 37895 ChimerSeq STARFusion TCGA_RNA-Seq CHP1-IGHG2 CHP1 chr15 41523545 + IGHG2 chr14 106111126 - Exonic hg19 LUSC TCGA-22-1005 6 1 Out-of-frame Inter-chr q15.1 37896 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SEC13 IGH@ chr14 107169928 - SEC13 chr3 10353762 - Exonic hg19 LUSC TCGA-43-6647 66 2 Out-of-frame Inter-chr 32.33 p25.3 37897 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-BHLHE41 IGL@ chr22 22786801 + BHLHE41 chr12 26275469 - Exonic hg19 LUSC TCGA-43-6647 23 1 Out-of-frame Inter-chr q11.22 p12.1 Tumor suppressor gene Transcription factor 37898 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-PLXNA1 IGL@ chr22 23101697 + PLXNA1 chr3 126710371 + Exonic hg19 LUSC TCGA-43-6647 23 1 Out-of-frame Inter-chr q11.22 q21.3 37899 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-BHLHE41 IGL@ chr22 22712608 + BHLHE41 chr12 26275469 - Exonic hg19 LUSC TCGA-43-6647 17 1 Out-of-frame Inter-chr q11.22 p12.1 Tumor suppressor gene Transcription factor 37900 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-SYNE2 IGL@ chr22 22712610 + SYNE2 chr14 64637004 + Exonic hg19 LUSC TCGA-43-6647 11 1 Out-of-frame Inter-chr q11.22 q23.2 37901 ChimerSeq STARFusion TCGA_RNA-Seq AKAP13-GOLGA6L3 AKAP13 chr15 86129054 + GOLGA6L3 chr15 85785451 + Exonic hg19 LUSC TCGA-43-6647 2 8 Out-of-frame Intra-chr q25.3 q25.3 37902 ChimerSeq STARFusion TCGA_RNA-Seq HIRA-IGHG4 HIRA chr22 19344505 - IGHG4 chr14 106111128 - Exonic hg19 LUSC TCGA-J1-A4AH 55 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 37903 ChimerSeq STARFusion TCGA_RNA-Seq HIRA-IGHG4 HIRA chr22 19344505 - IGHG4 chr14 106136183 - Exonic hg19 LUSC TCGA-J1-A4AH 54 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 37904 ChimerSeq STARFusion TCGA_RNA-Seq HIRA-IGHG4 HIRA chr22 19344505 - IGHG4 chr14 106092404 - Exonic hg19 LUSC TCGA-J1-A4AH 48 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 37905 ChimerSeq STARFusion TCGA_RNA-Seq COASY-IGHG3 COASY chr17 40714606 + IGHG3 chr14 106237747 - Exonic hg19 LUSC TCGA-J1-A4AH 21 0 Out-of-frame Inter-chr q21.2 37906 ChimerSeq STARFusion TCGA_RNA-Seq CEP192-AFG3L2 CEP192 chr18 13001581 + AFG3L2 chr18 12329782 - Exonic hg19 LUSC TCGA-J1-A4AH 4 29 Out-of-frame Intra-chr p11.21 p11.21 Seq+ 37907 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGH@ TET3 chr2 74329257 + IGH@ chr14 106209409 - Exonic hg19 LUSC TCGA-J1-A4AH 6 1 Out-of-frame Inter-chr p13.1 Transcription factor 32.33 37908 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGHG1 TET3 chr2 74329257 + IGHG1 chr14 106209409 - Exonic hg19 LUSC TCGA-J1-A4AH 6 1 Out-of-frame Inter-chr p13.1 Transcription factor q32.33 37909 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGH@ TET3 chr2 74329257 + IGH@ chr14 106136183 - Exonic hg19 LUSC TCGA-J1-A4AH 5 1 Out-of-frame Inter-chr p13.1 Transcription factor 32.33 37910 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGHG1 TET3 chr2 74329257 + IGHG1 chr14 106237744 - Exonic hg19 LUSC TCGA-J1-A4AH 4 1 Out-of-frame Inter-chr p13.1 Transcription factor q32.33 37911 ChimerSeq STARFusion TCGA_RNA-Seq BAGE2-CTBP2P1 BAGE2 chr21 11058161 - CTBP2P1 chrY 59001440 + Exonic hg19 LUSC TCGA-J1-A4AH 3 1 Out-of-frame Inter-chr p11.2 37912 ChimerSeq STARFusion TCGA_RNA-Seq DTD1-TASP1 DTD1 chr20 18576885 + TASP1 chr20 13246829 - Exonic hg19 LUSC TCGA-33-AAS8 3 5 CDS-3'UTR Intra-chr p11.23 p12.1 Seq+ 37913 ChimerSeq STARFusion TCGA_RNA-Seq TRIO-ANKH TRIO chr5 14287172 + ANKH chr5 14751348 - Exonic hg19 LUSC TCGA-34-5241 7 136 In-Frame Intra-chr p15.2 p15.2 Seq+ 37914 ChimerSeq STARFusion TCGA_RNA-Seq ITPRIPL1-IL36G ITPRIPL1 chr2 96993855 + IL36G chr2 113742417 + Exonic hg19 LUSC TCGA-34-5241 9 115 In-Frame Intra-chr q11.2 q14.1 Seq+ 37915 ChimerSeq STARFusion TCGA_RNA-Seq ITPRIPL1-IL36G ITPRIPL1 chr2 96993506 + IL36G chr2 113742417 + Exonic hg19 LUSC TCGA-34-5241 4 115 In-Frame Intra-chr q11.2 q14.1 Seq+ 37916 ChimerSeq STARFusion TCGA_RNA-Seq ITPRIPL1-IL36G ITPRIPL1 chr2 96993995 + IL36G chr2 113742417 + Exonic hg19 LUSC TCGA-34-5241 3 115 In-Frame Intra-chr q11.2 q14.1 Seq+ 37917 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-APLP1 ACTN4 chr19 39138547 + APLP1 chr19 36361798 + Exonic hg19 LUSC TCGA-34-5241 3 16 In-Frame Intra-chr q13.12 Seq+ 37918 ChimerSeq STARFusion TCGA_RNA-Seq MZT2A-C2orf40 MZT2A chr2 132249449 - C2orf40 chr2 106688300 + Exonic hg19 LUSC TCGA-34-5241 3 13 In-Frame Intra-chr q21.1 q12.2 Tumor suppressor gene 37919 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-APLP1 ACTN4 chr19 39138547 + APLP1 chr19 36360569 + Exonic hg19 LUSC TCGA-34-5241 2 16 In-Frame Intra-chr q13.12 Seq+ 37920 ChimerSeq STARFusion TCGA_RNA-Seq ZNF430-GABRB1 ZNF430 chr19 21216990 + GABRB1 chr4 47033931 + Exonic hg19 LUSC TCGA-34-5241 3 5 Out-of-frame Inter-chr Transcription factor p12 Seq+ 37921 ChimerSeq STARFusion TCGA_RNA-Seq CCDC97-SIPA1L3 CCDC97 chr19 41816261 + SIPA1L3 chr19 38519729 + Exonic hg19 LUSC TCGA-34-5241 2 6 CDS-5'UTR Intra-chr q13.2 q13.13 Seq+ 37922 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHGP STK25 chr2 242434915 - IGHGP chr14 106136184 - Exonic hg19 LUSC TCGA-85-8287 92 1 Out-of-frame Inter-chr q37.3 37923 ChimerSeq STARFusion TCGA_RNA-Seq CHP1-IGHG2 CHP1 chr15 41523544 + IGHG2 chr14 106136182 - Exonic hg19 LUSC TCGA-85-8287 74 1 Out-of-frame Inter-chr q15.1 37924 ChimerSeq STARFusion TCGA_RNA-Seq CHP1-IGHG2 CHP1 chr15 41523544 + IGHG2 chr14 106209408 - Exonic hg19 LUSC TCGA-85-8287 73 1 Out-of-frame Inter-chr q15.1 37925 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-PITPNM2 IGL@ chr22 22764599 + PITPNM2 chr12 123472347 - Exonic hg19 LUSC TCGA-85-8287 30 1 Out-of-frame Inter-chr q11.22 q24.31 37926 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHGP STK25 chr2 242434915 - IGHGP chr14 106209410 - Exonic hg19 LUSC TCGA-85-8287 27 1 Out-of-frame Inter-chr q37.3 37927 ChimerSeq STARFusion TCGA_RNA-Seq CHP1-IGHG2 CHP1 chr15 41523544 + IGHG2 chr14 106111127 - Exonic hg19 LUSC TCGA-85-8287 18 1 Out-of-frame Inter-chr q15.1 37928 ChimerSeq STARFusion TCGA_RNA-Seq NADK-IGKJ1 NADK chr1 1689914 - IGKJ1 chr2 89161433 - Exonic hg19 LUSC TCGA-85-8287 17 0 Out-of-frame Inter-chr p36.33 p11.2 37929 ChimerSeq STARFusion TCGA_RNA-Seq STX12-WDTC1 STX12 chr1 28146243 + WDTC1 chr1 27608730 + Exonic hg19 LUSC TCGA-85-8287 5 26 In-Frame Intra-chr p35.3 p36.11 Seq+ 37930 ChimerSeq STARFusion TCGA_RNA-Seq TICRR-GABARAPL3 TICRR chr15 90170413 + GABARAPL3 chr15 90892676 - Exonic hg19 LUSC TCGA-85-8287 7 14 Out-of-frame Intra-chr q26.1 q26.1 37931 ChimerSeq STARFusion TCGA_RNA-Seq KIT-SLC4A4 KIT chr4 55599358 + SLC4A4 chr4 72102293 + Exonic hg19 LUSC TCGA-85-8287 2 32 CDS-5'UTR Intra-chr q12 TK:PDGFR Oncogene q13.3 Seq+ 37932 ChimerSeq STARFusion TCGA_RNA-Seq ENGASE-RBFOX3 ENGASE chr17 77082851 + RBFOX3 chr17 77086967 - Exonic hg19 LUSC TCGA-85-8287 4 18 3'UTR-CDS Intra-chr q25.3 q25.3 Seq+ 37933 ChimerSeq STARFusion TCGA_RNA-Seq TXNRD1-GLT8D2 TXNRD1 chr12 104682818 + GLT8D2 chr12 104415269 - Exonic hg19 LUSC TCGA-33-AASB 185 1385 5'UTR-5'UTR Intra-chr q23.3 q23.3 Seq+ 37934 ChimerSeq STARFusion TCGA_RNA-Seq TXNRD1-GLT8D2 TXNRD1 chr12 104682818 + GLT8D2 chr12 104444066 - Exonic hg19 LUSC TCGA-33-AASB 90 1379 5'UTR-5'UTR Intra-chr q23.3 q23.3 Seq+ 37935 ChimerSeq STARFusion TCGA_RNA-Seq TXNRD1-GLT8D2 TXNRD1 chr12 104682818 + GLT8D2 chr12 104413454 - Exonic hg19 LUSC TCGA-33-AASB 38 1379 5'UTR-5'UTR Intra-chr q23.3 q23.3 Seq+ 37936 ChimerSeq STARFusion TCGA_RNA-Seq TXNRD1-GLT8D2 TXNRD1 chr12 104680887 + GLT8D2 chr12 104415269 - Exonic hg19 LUSC TCGA-33-AASB 23 1379 5'UTR-5'UTR Intra-chr q23.3 q23.3 Seq+ 37937 ChimerSeq STARFusion TCGA_RNA-Seq GNL3-MANF GNL3 chr3 52720121 + MANF chr3 51423639 + Exonic hg19 LUSC TCGA-33-AASB 17 92 In-Frame Intra-chr p21.1 p21.2 Seq+ 37938 ChimerSeq STARFusion TCGA_RNA-Seq NCOA4-CD96 NCOA4 chr10 51565296 + CD96 chr3 111083360 + Exonic hg19 LUSC TCGA-33-AASL 15 37 5'UTR-5'UTR Inter-chr q11.22 Oncogene Tumor suppressor gene q13.13 Seq+ 37939 ChimerSeq STARFusion TCGA_RNA-Seq RAB3GAP1-R3HDM1 RAB3GAP1 chr2 135843953 + R3HDM1 chr2 136467032 + Exonic hg19 LUSC TCGA-33-AASL 5 35 Out-of-frame Intra-chr q21.3 q21.3 37940 ChimerSeq STARFusion TCGA_RNA-Seq XPR1-MR1 XPR1 chr1 180601406 + MR1 chr1 181019147 + Exonic hg19 LUSC TCGA-33-AASL 3 19 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 37941 ChimerSeq STARFusion TCGA_RNA-Seq PLBD1-RPL30P11 PLBD1 chr12 14688593 - RPL30P11 chr12 14510520 - Exonic hg19 LUSC TCGA-33-AASL 5 10 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 37942 ChimerSeq STARFusion TCGA_RNA-Seq TNS4-CCR7 TNS4 chr17 38640736 - CCR7 chr17 38715194 - Exonic hg19 LUSC TCGA-33-AASI 79 224 In-Frame Intra-chr q21.2 q21.2 Seq+ 37943 ChimerSeq STARFusion TCGA_RNA-Seq HAP1-TMSB10 HAP1 chr17 39877796 - TMSB10 chr2 85132808 + Exonic hg19 LUSC TCGA-33-AASI 3 8 Out-of-frame Inter-chr q21.2 p11.2 37944 ChimerSeq STARFusion TCGA_RNA-Seq RB1-GADD45GIP1 RB1 chr13 48955579 + GADD45GIP1 chr19 13065340 - Exonic hg19 LUSC TCGA-52-7809 7 20 Out-of-frame Inter-chr q14.2 Oncogene Tumor suppressor gene p13.13 Tumor suppressor gene Seq+ 37945 ChimerSeq STARFusion TCGA_RNA-Seq PPM1B-SRBD1 PPM1B chr2 44396413 + SRBD1 chr2 45647033 - Exonic hg19 LUSC TCGA-52-7809 6 22 5'UTR-CDS Intra-chr p21 p21 Seq+ 37946 ChimerSeq STARFusion TCGA_RNA-Seq TRIM33-CSMD2 TRIM33 chr1 114948032 - CSMD2 chr1 34128692 - Exonic hg19 LUSC TCGA-52-7809 3 16 In-Frame Intra-chr p13.2 Oncogene p35.1 Seq+ 37947 ChimerSeq STARFusion TCGA_RNA-Seq MAPRE1-TMEM131 MAPRE1 chr20 31434576 + TMEM131 chr2 98543950 - Exonic hg19 LUSC TCGA-52-7809 2 9 Out-of-frame Inter-chr q11.21 q11.2 Seq+ 37948 ChimerSeq STARFusion TCGA_RNA-Seq OXSR1-MYD88 OXSR1 chr3 38232330 + MYD88 chr3 38181355 + Exonic hg19 LUSC TCGA-52-7809 2 6 In-Frame Intra-chr p22.2 p22.2 Oncogene Seq+ 37949 ChimerSeq STARFusion TCGA_RNA-Seq SCAF1-IGHG3 SCAF1 chr19 50155992 + IGHG3 chr14 106330462 - Exonic hg19 LUSC TCGA-39-5034 21 2 Out-of-frame Inter-chr q13.33 37950 ChimerSeq STARFusion TCGA_RNA-Seq TTLL7-GNG5 TTLL7 chr1 84464614 - GNG5 chr1 84967653 - Exonic hg19 LUSC TCGA-39-5034 9 33 5'UTR-CDS Intra-chr p31.1 p22.3 Seq+ 37951 ChimerSeq STARFusion TCGA_RNA-Seq SFTA3-SLC25A21 SFTA3 chr14 36982317 - SLC25A21 chr14 37153085 - Exonic hg19 LUSC TCGA-39-5034 2 23 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 37952 ChimerSeq STARFusion TCGA_RNA-Seq AGAP1-AANAT AGAP1 chr2 236403493 + AANAT chr17 74458398 + Exonic hg19 LUSC TCGA-39-5034 2 14 CDS-5'UTR Inter-chr q37.2 q25.1 Seq+ 37953 ChimerSeq STARFusion TCGA_RNA-Seq WDR1-IGHG1 WDR1 chr4 10076256 - IGHG1 chr14 106209408 - Exonic hg19 LUSC TCGA-39-5034 5 2 Out-of-frame Inter-chr p16.1 q32.33 37954 ChimerSeq STARFusion TCGA_RNA-Seq TBCD-ASPSCR1 TBCD chr17 80730383 + ASPSCR1 chr17 79967362 + Exonic hg19 LUSC TCGA-39-5034 4 3 In-Frame Intra-chr q25.3 Seq+ 37955 ChimerSeq STARFusion TCGA_RNA-Seq CAPN15-DECR2 CAPN15 chr16 578029 + DECR2 chr16 454956 + Exonic hg19 LUSC TCGA-39-5034 3 4 Out-of-frame Intra-chr p13.3 Seq+ 37956 ChimerSeq STARFusion TCGA_RNA-Seq CAPN15-NME4 CAPN15 chr16 578029 + NME4 chr16 454956 + Exonic hg19 LUSC TCGA-39-5034 3 3 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 37957 ChimerSeq STARFusion TCGA_RNA-Seq BAP1-TCEA3 BAP1 chr3 52439781 - TCEA3 chr1 23745632 - Exonic hg19 MESO TCGA-MQ-A4LC-01A 5 55 Out-of-frame Inter-chr p21.1 Oncogene Tumor suppressor gene Seq+ 37958 ChimerSeq STARFusion TCGA_RNA-Seq BAP1-TCEA3 BAP1 chr3 52440269 - TCEA3 chr1 23745632 - Exonic hg19 MESO TCGA-MQ-A4LC-01A 5 55 In-Frame Inter-chr p21.1 Oncogene Tumor suppressor gene Seq+ 37959 ChimerSeq STARFusion TCGA_RNA-Seq PRR15L-CDK5RAP3 PRR15L chr17 46035023 - CDK5RAP3 chr17 46050885 + Exonic hg19 MESO TCGA-MQ-A4LC-01A 10 27 5'UTR-CDS Intra-chr q21.32 q21.32 Seq+ 37960 ChimerSeq STARFusion TCGA_RNA-Seq ITLN1-DOCK11 ITLN1 chr1 160851748 - DOCK11 chrX 117742246 + Exonic hg19 MESO TCGA-MQ-A4LC-01A 4 1 Out-of-frame Inter-chr q23.3 q24 37961 ChimerSeq STARFusion TCGA_RNA-Seq ACY1-BAP1 ACY1 chr3 52021640 + BAP1 chr3 52441476 - Exonic hg19 MESO TCGA-LK-A4O5-01A 8 16 In-Frame Intra-chr p21.2 Tumor suppressor gene p21.1 Oncogene Tumor suppressor gene Seq+ 37962 ChimerSeq STARFusion TCGA_RNA-Seq IFT74-HECTD4 IFT74 chr9 26962085 + HECTD4 chr12 112621070 - Exonic hg19 MESO TCGA-LK-A4O5-01A 7 6 Out-of-frame Inter-chr p21.2 q24.13 Seq+ 37963 ChimerSeq STARFusion TCGA_RNA-Seq PBX3-SH3GL2 PBX3 chr9 128510902 + SH3GL2 chr9 17747064 + Exonic hg19 MESO TCGA-LK-A4O5-01A 2 13 Out-of-frame Intra-chr q33.3 Transcription factor p22.2 Seq+ 37964 ChimerSeq STARFusion TCGA_RNA-Seq CEP63-AGPS CEP63 chr3 134270854 + AGPS chr2 178402802 + Exonic hg19 MESO TCGA-3H-AB3S 3 15 Out-of-frame Inter-chr q22.2 q31.2 Seq+ 37965 ChimerSeq STARFusion TCGA_RNA-Seq MYO6-CRYL1 MYO6 chr6 76459140 + CRYL1 chr13 20987526 - Exonic hg19 MESO TCGA-MQ-A4KX-01A 6 8 5'UTR-CDS Inter-chr q14.1 q12.11 Seq+ 37966 ChimerSeq STARFusion TCGA_RNA-Seq ITLN1-ANKRD11 ITLN1 chr1 160851747 - ANKRD11 chr16 89355052 - Exonic hg19 MESO TCGA-MQ-A4KX-01A 3 1 Out-of-frame Inter-chr q23.3 q24.3 37967 ChimerSeq STARFusion TCGA_RNA-Seq KLHDC3-LOC100131047 KLHDC3 chr6 42986294 + LOC100131047 chr6 38875160 - Exonic hg19 MESO TCGA-MQ-A6BS-01A 14 20 CDS-3'UTR Intra-chr p21.1 37968 ChimerSeq STARFusion TCGA_RNA-Seq PRKAG2-WASL PRKAG2 chr7 151292431 - WASL chr7 123349277 - Exonic hg19 MESO TCGA-UT-A88C 5 33 In-Frame Intra-chr q36.1 q31.32 Seq+ 37969 ChimerSeq STARFusion TCGA_RNA-Seq C17orf62-NARF C17orf62 chr17 80408576 - NARF chr17 80443373 + Exonic hg19 MESO TCGA-3H-AB3K 2 0 5'UTR-CDS Intra-chr q25.3 q25.3 Seq+ 37970 ChimerSeq STARFusion TCGA_RNA-Seq GPHN-MPHOSPH8 GPHN chr14 66975309 + MPHOSPH8 chr13 20233135 + Exonic hg19 MESO TCGA-MQ-A6BQ-01A 2 1 In-Frame Inter-chr q23.3 q12.11 37971 ChimerSeq STARFusion TCGA_RNA-Seq AKT3-HEATR1 AKT3 chr1 243800913 - HEATR1 chr1 236714290 - Exonic hg19 MESO TCGA-UT-A88E 18 48 Out-of-frame Intra-chr AGC:Akt Oncogene q43 Seq+ 37972 ChimerSeq STARFusion TCGA_RNA-Seq ALG9-PDGFD ALG9 chr11 111706888 - PDGFD chr11 103818452 - Exonic hg19 MESO TCGA-UT-A88E 14 40 In-Frame Intra-chr q23.1 q22.3 Seq+ 37973 ChimerSeq STARFusion TCGA_RNA-Seq ALG9-PDGFD ALG9 chr11 111706888 - PDGFD chr11 103818452 - Exonic hg19 MESO TCGA-UT-A88E 14 40 In-Frame Intra-chr q23.1 q22.3 Seq+ 37974 ChimerSeq STARFusion TCGA_RNA-Seq LRP8-RPL14 LRP8 chr1 53793512 - RPL14 chr3 40503543 + Exonic hg19 MESO TCGA-MQ-A6BR-01A 6 2 Out-of-frame Inter-chr p32.3 p22.1 37975 ChimerSeq STARFusion TCGA_RNA-Seq ANXA8L2-LINC00842 ANXA8L2 chr10 47747132 + LINC00842 chr10 47099714 - Exonic hg19 MESO TCGA-MQ-A6BR-01A 3 12 Out-of-frame Intra-chr 37976 ChimerSeq STARFusion TCGA_RNA-Seq LRP8-RPL14 LRP8 chr1 53793534 - RPL14 chr3 40503521 + Exonic hg19 MESO TCGA-MQ-A6BR-01A 3 2 Out-of-frame Inter-chr p32.3 p22.1 37977 ChimerSeq STARFusion TCGA_RNA-Seq LRRC40-MINOS1 LRRC40 chr1 70671073 - MINOS1 chr1 19949968 + Exonic hg19 MESO TCGA-TS-A7OY-01A 2 33 In-Frame Intra-chr p31.1 p36.13 Seq+ 37978 ChimerSeq STARFusion TCGA_RNA-Seq APBA2-OCA2 APBA2 chr15 29213952 + OCA2 chr15 28096621 - Exonic hg19 MESO TCGA-TS-A7OY-01A 3 16 5'UTR-CDS Intra-chr q13.1 Seq+ 37979 ChimerSeq STARFusion TCGA_RNA-Seq APBA2-OCA2 APBA2 chr15 29213952 + OCA2 chr15 28116404 - Exonic hg19 MESO TCGA-TS-A7OY-01A 2 16 5'UTR-CDS Intra-chr q13.1 Seq+ 37980 ChimerSeq STARFusion TCGA_RNA-Seq VAV2-LINC00092 VAV2 chr9 136804225 - LINC00092 chr9 98783563 - Exonic hg19 MESO TCGA-TS-A7OY-01A 2 15 CDS-3'UTR Intra-chr q34.2 q22.32 37981 ChimerSeq STARFusion TCGA_RNA-Seq LRP8-RPL14 LRP8 chr1 53793534 - RPL14 chr3 40503521 + Exonic hg19 MESO TCGA-TS-A7OY-01A 3 2 Out-of-frame Inter-chr p32.3 p22.1 37982 ChimerSeq STARFusion TCGA_RNA-Seq NAB2-STAT6 NAB2 chr12 57487381 + STAT6 chr12 57493223 - Exonic hg19 MESO TCGA-SH-A7BH-01A 3 7 In-Frame Intra-chr q13.3 q13.3 Transcription factor KB Pub Seq+ 37983 ChimerSeq STARFusion TCGA_RNA-Seq ST5-HBG1 ST5 chr11 8932368 - HBG1 chr11 5270820 - Exonic hg19 MESO TCGA-MQ-A4LV-01A 2 2 5'UTR-CDS Intra-chr p15.4 Tumor suppressor gene p15.4 37984 ChimerSeq STARFusion TCGA_RNA-Seq RPL27-AARSD1 RPL27 chr17 41150848 + AARSD1 chr17 41103911 - Exonic hg19 MESO TCGA-MQ-A4LV-01A 2 0 In-Frame Intra-chr q21.31 q21.31 37985 ChimerSeq STARFusion TCGA_RNA-Seq AKAP13-CASC4 AKAP13 chr15 86129054 + CASC4 chr15 44624186 + Exonic hg19 MESO TCGA-LK-A4NY-01A 13 19 Out-of-frame Intra-chr q25.3 q15.3 Seq+ 37986 ChimerSeq STARFusion TCGA_RNA-Seq AKAP13-CASC4 AKAP13 chr15 86129054 + CASC4 chr15 44629961 + Exonic hg19 MESO TCGA-LK-A4NY-01A 2 19 In-Frame Intra-chr q25.3 q15.3 Seq+ 37987 ChimerSeq STARFusion TCGA_RNA-Seq ALPK1-GALNTL6 ALPK1 chr4 113218625 + GALNTL6 chr4 173803941 + Exonic hg19 MESO TCGA-LK-A4NY-01A 3 6 5'UTR-CDS Intra-chr q25 q34.1 Seq+ 37988 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-CIDEA ETV6 chr12 11803094 + CIDEA chr18 12274092 + Exonic hg19 MESO TCGA-SC-A6LN-01A 71 171 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor p11.21 Seq+ 37989 ChimerSeq STARFusion TCGA_RNA-Seq RTTN-DOK6 RTTN chr18 67833298 - DOK6 chr18 67424992 + Exonic hg19 MESO TCGA-SC-A6LN-01A 2 9 In-Frame Intra-chr q22.2 q22.2 Seq+ 37990 ChimerSeq STARFusion TCGA_RNA-Seq NF2-PIAS1 NF2 chr22 30000101 + PIAS1 chr15 68378644 + Exonic hg19 MESO TCGA-LK-A4O7-01A 2 12 In-Frame Inter-chr q12.2 Oncogene Tumor suppressor gene q23 Tumor suppressor gene Seq+ 37991 ChimerSeq STARFusion TCGA_RNA-Seq ANXA8L2-LINC00842 ANXA8L2 chr10 47747132 + LINC00842 chr10 47099714 - Exonic hg19 MESO TCGA-LK-A4O6-01A 4 4 Out-of-frame Intra-chr 37992 ChimerSeq STARFusion TCGA_RNA-Seq UPK3B-PMS2P10 UPK3B chr7 76144726 + PMS2P10 chr7 74921967 - Exonic hg19 MESO TCGA-UD-AABZ 4 1 Out-of-frame Intra-chr q11.23 37993 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L2-NTPCR SIPA1L2 chr1 232629273 - NTPCR chr1 233113909 + Exonic hg19 MESO TCGA-SH-A9CU 2 9 In-Frame Intra-chr q42.2 q42.2 Seq+ 37994 ChimerSeq STARFusion TCGA_RNA-Seq TBCE-SIPA1L2 TBCE chr1 235530819 + SIPA1L2 chr1 232629406 - Exonic hg19 MESO TCGA-SH-A9CU 3 2 5'UTR-CDS Intra-chr q42.2 Seq+ 37995 ChimerSeq STARFusion TCGA_RNA-Seq LRRC16A-DCDC2 LRRC16A chr6 25540306 + DCDC2 chr6 24353851 - Exonic hg19 MESO TCGA-UD-AAC6 2 2 Out-of-frame Intra-chr p22.3 Tumor suppressor gene Seq+ 37996 ChimerSeq STARFusion TCGA_RNA-Seq EXOSC4-NEIL2 EXOSC4 chr8 145133800 + NEIL2 chr8 11637105 + Exonic hg19 MESO TCGA-UD-AAC4 12 56 Out-of-frame Intra-chr q24.3 p23.1 Seq+ 37997 ChimerSeq STARFusion TCGA_RNA-Seq OSCP1-NF1 OSCP1 chr1 36915859 - NF1 chr17 29701031 + Exonic hg19 MESO TCGA-UD-AAC4 9 36 In-Frame Inter-chr p34.3 Tumor suppressor gene q11.2 Oncogene Tumor suppressor gene Seq+ 37998 ChimerSeq STARFusion TCGA_RNA-Seq NASP-EDN2 NASP chr1 46081072 + EDN2 chr1 41948946 - Exonic hg19 MESO TCGA-UD-AAC4 6 22 Out-of-frame Intra-chr p34.1 p34.2 Seq+ 37999 ChimerSeq STARFusion TCGA_RNA-Seq PDE4DIP-CCL14 PDE4DIP chr1 144952201 - CCL14 chr17 34313740 - Exonic hg19 MESO TCGA-UD-AAC4 2 6 CDS-5'UTR Inter-chr q21.2 Oncogene q12 38000 ChimerSeq STARFusion TCGA_RNA-Seq ZNF589-LRRFIP2 ZNF589 chr3 48302429 + LRRFIP2 chr3 37190529 - Exonic hg19 MESO TCGA-MQ-A4LM-01A 2 4 CDS-5'UTR Intra-chr p21.31 Transcription factor p22.2 Seq+ 38001 ChimerSeq STARFusion TCGA_RNA-Seq SUPT20H-RPL18 SUPT20H chr13 37633722 - RPL18 chr19 49121132 - Exonic hg19 MESO TCGA-NQ-A638-01A 3 0 Out-of-frame Inter-chr q13.3 q13.33 38002 ChimerSeq STARFusion TCGA_RNA-Seq EML3-INTS5 EML3 chr11 62372585 - INTS5 chr11 62417471 - Exonic hg19 MESO TCGA-TS-A7P0-01A 6 8 In-Frame Intra-chr q12.3 q12.3 Seq+ 38003 ChimerSeq STARFusion TCGA_RNA-Seq SLC35A4-MTSS1 SLC35A4 chr5 139945556 + MTSS1 chr8 125603476 - Exonic hg19 MESO TCGA-TS-A7P0-01A 6 8 5'UTR-CDS Inter-chr q31.3 q24.13 Tumor suppressor gene Seq+ 38004 ChimerSeq STARFusion TCGA_RNA-Seq ZNF212-B2M ZNF212 chr7 148936893 + B2M chr15 45007621 + Exonic hg19 MESO TCGA-TS-A7P0-01A 2 2 Out-of-frame Inter-chr q36.1 Transcription factor Oncogene 38005 ChimerSeq STARFusion TCGA_RNA-Seq ANXA8L2-LINC00842 ANXA8L2 chr10 47747132 + LINC00842 chr10 47099714 - Exonic hg19 MESO TCGA-LK-A4O2-01A 2 1 Out-of-frame Intra-chr 38006 ChimerSeq STARFusion TCGA_RNA-Seq SPATS2L-SGOL2 SPATS2L chr2 201254006 + SGOL2 chr2 201390859 + Exonic hg19 MESO TCGA-YS-A95B 2 1 CDS-5'UTR Intra-chr q33.1 38007 ChimerSeq STARFusion TCGA_RNA-Seq BAP1-RILP BAP1 chr3 52443570 - RILP chr17 1551789 - Exonic hg19 MESO TCGA-SH-A7BD-01A 98 197 Out-of-frame Inter-chr p21.1 Oncogene Tumor suppressor gene Tumor suppressor gene Seq+ 38008 ChimerSeq STARFusion TCGA_RNA-Seq DCTN1-WDR54 DCTN1 chr2 74618921 - WDR54 chr2 74649997 + Exonic hg19 MESO TCGA-SH-A7BD-01A 12 11 5'UTR-CDS Intra-chr p13.1 p13.1 Seq+ 38009 ChimerSeq STARFusion TCGA_RNA-Seq CDC123-HK1 CDC123 chr10 12240775 + HK1 chr10 71136690 + Exonic hg19 MESO TCGA-SH-A7BD-01A 7 7 In-Frame Intra-chr p14 q22.1 Seq+ 38010 ChimerSeq STARFusion TCGA_RNA-Seq UPK3B-LOC100132832 UPK3B chr7 76144473 + LOC100132832 chr7 76676146 + Exonic hg19 MESO TCGA-SH-A7BD-01A 3 19 CDS-5'UTR Intra-chr 38011 ChimerSeq STARFusion TCGA_RNA-Seq CATSPERG-RASSF1 CATSPERG chr19 38828144 + RASSF1 chr3 50369585 - Exonic hg19 MESO TCGA-SH-A7BD-01A 2 7 In-Frame Inter-chr q13.2 p21.31 Tumor suppressor gene Seq+ 38012 ChimerSeq STARFusion TCGA_RNA-Seq LRRC1-HSP90AB1 LRRC1 chr6 53660213 + HSP90AB1 chr6 44216367 + Exonic hg19 MESO TCGA-SC-A6LQ-01A 2 3 CDS-5'UTR Intra-chr p12.1 p21.1 Oncogene Seq+ 38013 ChimerSeq STARFusion TCGA_RNA-Seq SIK3-PDXDC2P SIK3 chr11 116728526 - PDXDC2P chr16 70024586 - Exonic hg19 MESO TCGA-SC-A6LQ-01A 2 2 CDS-3'UTR Inter-chr q23.3 q22.1 38014 ChimerSeq STARFusion TCGA_RNA-Seq ABO-HTR3B ABO chr9 136127865 - HTR3B chr11 113802106 + Exonic hg19 MESO TCGA-TS-A8AY 15 89 3'UTR-CDS Inter-chr q23.2 Seq+ 38015 ChimerSeq STARFusion TCGA_RNA-Seq FAM216A-IGF1 FAM216A chr12 110910923 + IGF1 chr12 102813468 - Exonic hg19 MESO TCGA-TS-A8AY 12 66 In-Frame Intra-chr q24.11 q23.2 Tumor suppressor gene Seq+ 38016 ChimerSeq STARFusion TCGA_RNA-Seq TAX1BP1-KCTD7 TAX1BP1 chr7 27809453 + KCTD7 chr7 66260498 + Exonic hg19 MESO TCGA-TS-A8AY 9 40 CDS-3'UTR Intra-chr p15.2 q11.21 Seq+ 38017 ChimerSeq STARFusion TCGA_RNA-Seq TAX1BP1-RABGEF1 TAX1BP1 chr7 27809453 + RABGEF1 chr7 66260498 + Exonic hg19 MESO TCGA-TS-A8AY 9 40 In-Frame Intra-chr p15.2 q11.21 Seq+ 38018 ChimerSeq STARFusion TCGA_RNA-Seq HSDL2-TEX10 HSDL2 chr9 115142460 + TEX10 chr9 103111654 - Exonic hg19 MESO TCGA-TS-A8AY 13 15 5'UTR-5'UTR Intra-chr q32 q31.1 Seq+ 38019 ChimerSeq STARFusion TCGA_RNA-Seq TEX10-HSDL2 TEX10 chr9 103115054 - HSDL2 chr9 115166275 + Exonic hg19 MESO TCGA-TS-A8AY 4 39 5'UTR-CDS Intra-chr q31.1 q32 Seq+ 38020 ChimerSeq STARFusion TCGA_RNA-Seq HIPK3-DPAGT1 HIPK3 chr11 33279435 + DPAGT1 chr11 118971118 - Exonic hg19 MESO TCGA-TS-A8AY 2 20 5'UTR-CDS Intra-chr p13 CMGC:DYRK q23.3 Seq+ 38021 ChimerSeq STARFusion TCGA_RNA-Seq RPL7L1-HIPK3 RPL7L1 chr6 42848704 + HIPK3 chr11 33368839 + Exonic hg19 MESO TCGA-TS-A8AY 4 9 Out-of-frame Inter-chr p21.1 p13 CMGC:DYRK Seq+ 38022 ChimerSeq STARFusion TCGA_RNA-Seq RPL7L1-HIPK3 RPL7L1 chr6 42847689 + HIPK3 chr11 33368839 + Exonic hg19 MESO TCGA-TS-A8AY 3 9 Out-of-frame Inter-chr p21.1 p13 CMGC:DYRK Seq+ 38023 ChimerSeq STARFusion TCGA_RNA-Seq GLT1D1-CTNNA2 GLT1D1 chr12 129338194 + CTNNA2 chr2 80772107 + Exonic hg19 MESO TCGA-TS-A8AY 2 7 Out-of-frame Inter-chr q24.33 p12 Tumor suppressor gene Seq+ 38024 ChimerSeq STARFusion TCGA_RNA-Seq ARPC2-RNASEH2B ARPC2 chr2 219114644 + RNASEH2B chr13 51519563 + Exonic hg19 MESO TCGA-TS-A8AV 2 8 Out-of-frame Inter-chr q35 q14.3 Seq+ 38025 ChimerSeq STARFusion TCGA_RNA-Seq MAP1S-ECH1 MAP1S chr19 17835998 + ECH1 chr19 39306647 - Exonic hg19 MESO TCGA-TS-A8AI 66 234 Out-of-frame Intra-chr p13.11 Seq+ 38026 ChimerSeq STARFusion TCGA_RNA-Seq FRMD4A-FAM107B FRMD4A chr10 14372057 - FAM107B chr10 14572514 - Exonic hg19 MESO TCGA-TS-A8AI 5 6 Out-of-frame Intra-chr p13 p13 Seq+ 38027 ChimerSeq STARFusion TCGA_RNA-Seq FBN1-TEX9 FBN1 chr15 48905207 - TEX9 chr15 56686363 + Exonic hg19 MESO TCGA-TS-A8AF 2 4 In-Frame Intra-chr q21.1 q21.3 Seq+ 38028 ChimerSeq STARFusion TCGA_RNA-Seq NOSIP-NAP1L1 NOSIP chr19 50080016 - NAP1L1 chr12 76444433 - Exonic hg19 MESO TCGA-LK-A4NW-01A 2 0 5'UTR-CDS Inter-chr q13.33 q21.2 38029 ChimerSeq STARFusion TCGA_RNA-Seq INO80C-POLA1 INO80C chr18 33077683 - POLA1 chrX 24906123 + Exonic hg19 MESO TCGA-3H-AB3L 2 1 In-Frame Inter-chr q12.2 p22.11 Seq+ 38030 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-COL7A1 SEPT9 chr17 75303279 + COL7A1 chr3 48624122 - Exonic hg19 MESO TCGA-3H-AB3M 15 66 Out-of-frame Inter-chr p21.31 Seq+ 38031 ChimerSeq STARFusion TCGA_RNA-Seq MTAP-CDKN2A MTAP chr9 21815518 + CDKN2A chr9 21968241 - Exonic hg19 MESO TCGA-3H-AB3M 21 17 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.3 Oncogene Tumor suppressor gene Seq+ 38032 ChimerSeq STARFusion TCGA_RNA-Seq VCAN-GABRA5 VCAN chr5 82849341 + GABRA5 chr15 27188362 + Exonic hg19 MESO TCGA-3H-AB3M 5 38 In-Frame Inter-chr q14.2 q12 Seq+ 38033 ChimerSeq STARFusion TCGA_RNA-Seq EPB42-RPUSD2 EPB42 chr15 43495313 - RPUSD2 chr15 40863803 + Exonic hg19 MESO TCGA-3H-AB3M 5 3 In-Frame Intra-chr q15.2 q15.1 Seq+ 38034 ChimerSeq STARFusion TCGA_RNA-Seq MAPKBP1-RPUSD2 MAPKBP1 chr15 42067587 + RPUSD2 chr15 40863803 + Exonic hg19 MESO TCGA-3H-AB3M 2 4 In-Frame Intra-chr q15.1 q15.1 Seq+ 38035 ChimerSeq STARFusion TCGA_RNA-Seq MAPKBP1-EPB42 MAPKBP1 chr15 42067587 + EPB42 chr15 43495473 - Exonic hg19 MESO TCGA-3H-AB3M 2 3 Out-of-frame Intra-chr q15.1 q15.2 Seq+ 38036 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC8-PTPN12 ZCCHC8 chr12 122964737 - PTPN12 chr7 77261665 + Exonic hg19 MESO TCGA-3H-AB3M 2 2 Out-of-frame Inter-chr q24.31 q11.23 Tumor suppressor gene Seq+ 38037 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-RSBN1L PTPN12 chr7 77166962 + RSBN1L chr7 77365727 + Exonic hg19 MESO TCGA-TS-A7PB-01A 2 11 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 38038 ChimerSeq STARFusion TCGA_RNA-Seq RARB-FGF12 RARB chr3 25502832 + FGF12 chr3 191888445 - Exonic hg19 MESO TCGA-TS-A7PB-01A 2 2 In-Frame Intra-chr p24.2 Tumor suppressor gene Transcription factor q29 38039 ChimerSeq STARFusion TCGA_RNA-Seq ANXA8L2-LINC00842 ANXA8L2 chr10 47747132 + LINC00842 chr10 47099714 - Exonic hg19 MESO TCGA-TS-A7PB-01A 2 1 Out-of-frame Intra-chr 38040 ChimerSeq STARFusion TCGA_RNA-Seq TUBB3-RSPRY1 TUBB3 chr16 89989866 + RSPRY1 chr16 57238416 + Exonic hg19 MESO TCGA-YS-AA4M 2 20 CDS-5'UTR Intra-chr q24.3 q13 Seq+ 38041 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-NUP93 NFAT5 chr16 69600277 + NUP93 chr16 56832388 + Exonic hg19 MESO TCGA-YS-AA4M 4 10 Out-of-frame Intra-chr q22.1 Transcription factor q13 Seq+ 38042 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHG1-GJA1 PLEKHG1 chr6 151089874 + GJA1 chr6 121767978 + Exonic hg19 MESO TCGA-SC-A6LM-01A 7 13 CDS-5'UTR Intra-chr q25.1 q22.31 Tumor suppressor gene Seq+ 38043 ChimerSeq STARFusion TCGA_RNA-Seq RIC8B-RFX4 RIC8B chr12 107177822 + RFX4 chr12 107141215 + Exonic hg19 MESO TCGA-SC-A6LM-01A 2 30 Out-of-frame Intra-chr q23.3 q23.3 Transcription factor Seq+ 38044 ChimerSeq STARFusion TCGA_RNA-Seq TASP1-TRDN TASP1 chr20 13610581 - TRDN chr6 123600227 - Exonic hg19 MESO TCGA-SC-A6LM-01A 3 4 In-Frame Inter-chr p12.1 q22.31 Seq+ 38045 ChimerSeq STARFusion TCGA_RNA-Seq MAN1A1-MCM9 MAN1A1 chr6 119501022 - MCM9 chr6 119256155 - Exonic hg19 MESO TCGA-SC-A6LM-01A 3 3 Out-of-frame Intra-chr q22.31 q22.31 Tumor suppressor gene Seq+ 38046 ChimerSeq STARFusion TCGA_RNA-Seq SETD2-MACROD2 SETD2 chr3 47125210 - MACROD2 chr20 14066267 + Exonic hg19 MESO TCGA-SC-A6LM-01A 2 5 Out-of-frame Inter-chr p21.31 Oncogene Tumor suppressor gene p12.1 Seq+ 38047 ChimerSeq STARFusion TCGA_RNA-Seq UPK3B-PMS2P10 UPK3B chr7 76143393 + PMS2P10 chr7 74921967 - Exonic hg19 MESO TCGA-3U-A98J 2 1 Out-of-frame Intra-chr q11.23 38048 ChimerSeq STARFusion TCGA_RNA-Seq RAD51D-MAP2K4 RAD51D chr17 33428220 - MAP2K4 chr17 11984673 + Exonic hg19 MESO TCGA-3U-A98I 4 2 Out-of-frame Intra-chr q12 p12 STE:STE7 Oncogene Tumor suppressor gene Seq+ 38049 ChimerSeq STARFusion TCGA_RNA-Seq COL1A1-SSH2 COL1A1 chr17 48273515 - SSH2 chr17 27998991 - Exonic hg19 MESO TCGA-3U-A98I 3 1 Out-of-frame Intra-chr q21.33 Oncogene q11.2 38050 ChimerSeq STARFusion TCGA_RNA-Seq MGC2752-HCN1 MGC2752 chr19 59086955 + HCN1 chr5 45353348 - Exonic hg19 MESO TCGA-SC-A6LR-01A 2 1 Out-of-frame Inter-chr p12 38051 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-RNF8 ZFAND3 chr6 37787792 + RNF8 chr6 37358518 + Exonic hg19 MESO TCGA-NQ-A57I-01A 2 4 Out-of-frame Intra-chr p21.2 p21.2 Tumor suppressor gene Seq+ 38052 ChimerSeq STARFusion TCGA_RNA-Seq EMP2-CIITA EMP2 chr16 10674406 - CIITA chr16 11009427 + Exonic hg19 MESO TCGA-NQ-A57I-01A 2 0 5'UTR-CDS Intra-chr p13.13 Tumor suppressor gene p13.13 38053 ChimerSeq STARFusion TCGA_RNA-Seq ATP11A-COL14A1 ATP11A chr13 113344769 + COL14A1 chr8 121160045 + Exonic hg19 MESO TCGA-3U-A98D 7 16 CDS-5'UTR Inter-chr q34 q24.12 Seq+ 38054 ChimerSeq STARFusion TCGA_RNA-Seq ATP11A-COL14A1 ATP11A chr13 113344769 + COL14A1 chr8 121117822 + Exonic hg19 MESO TCGA-3U-A98D 2 16 CDS-5'UTR Inter-chr q34 q24.12 Seq+ 38055 ChimerSeq STARFusion TCGA_RNA-Seq ACOX3-STAT1 ACOX3 chr4 8442375 - STAT1 chr2 191863034 - Exonic hg19 MESO TCGA-TS-A7P8-01A 3 22 5'UTR-CDS Inter-chr p16.1 q32.2 Tumor suppressor gene Transcription factor Seq+ 38056 ChimerSeq STARFusion TCGA_RNA-Seq FAM172A-FLJ42709 FAM172A chr5 93111865 - FLJ42709 chr5 92747215 - Exonic hg19 MESO TCGA-TS-A7P8-01A 2 1 3'UTR-3'UTR Intra-chr q15 Tumor suppressor gene Seq+ 38057 ChimerSeq STARFusion TCGA_RNA-Seq ATRX-ARHGEF9 ATRX chrX 77041468 - ARHGEF9 chrX 62875617 - Exonic hg19 MESO TCGA-MQ-A4LP-01A 16 71 Out-of-frame Intra-chr q21.1 Oncogene q11.2 Seq+ 38058 ChimerSeq STARFusion TCGA_RNA-Seq C19orf25-PEPD C19orf25 chr19 1478773 - PEPD chr19 33882385 - Exonic hg19 MESO TCGA-MQ-A4LP-01A 8 24 In-Frame Intra-chr p13.3 q13.11 Seq+ 38059 ChimerSeq STARFusion TCGA_RNA-Seq ZNF780A-SAMD4B ZNF780A chr19 40587726 - SAMD4B chr19 39860295 + Exonic hg19 MESO TCGA-MQ-A4LP-01A 3 4 In-Frame Intra-chr Transcription factor q13.2 Seq+ 38060 ChimerSeq STARFusion TCGA_RNA-Seq SHB-CDKN2A SHB chr9 38067926 - CDKN2A chr9 21968241 - Exonic hg19 MESO TCGA-TS-A7P1 9 39 Out-of-frame Intra-chr p13.1 p21.3 Oncogene Tumor suppressor gene Seq+ 38061 ChimerSeq STARFusion TCGA_RNA-Seq ZHX3-SMG9 ZHX3 chr20 39896103 - SMG9 chr19 44242369 - Exonic hg19 MESO TCGA-TS-A7P7 4 34 5'UTR-CDS Inter-chr q12 Transcription factor q13.31 Seq+ 38062 ChimerSeq STARFusion TCGA_RNA-Seq ZHX3-SMG9 ZHX3 chr20 39897619 - SMG9 chr19 44242369 - Exonic hg19 MESO TCGA-TS-A7P7 3 34 5'UTR-CDS Inter-chr q12 Transcription factor q13.31 Seq+ 38063 ChimerSeq STARFusion TCGA_RNA-Seq ZHX3-SMG9 ZHX3 chr20 39896103 - SMG9 chr19 44238647 - Exonic hg19 MESO TCGA-TS-A7P7 2 34 5'UTR-CDS Inter-chr q12 Transcription factor q13.31 Seq+ 38064 ChimerSeq STARFusion TCGA_RNA-Seq ZHX3-SMG9 ZHX3 chr20 39897630 - SMG9 chr19 44242369 - Exonic hg19 MESO TCGA-TS-A7P7 2 34 5'UTR-CDS Inter-chr q12 Transcription factor q13.31 Seq+ 38065 ChimerSeq STARFusion TCGA_RNA-Seq ARID2-PITPNM2 ARID2 chr12 46254732 + PITPNM2 chr12 123498589 - Exonic hg19 MESO TCGA-TS-A7P7 2 1 Out-of-frame Intra-chr q12 Oncogene Tumor suppressor gene Transcription factor q24.31 38066 ChimerSeq STARFusion TCGA_RNA-Seq TXNDC11-BCAR4 TXNDC11 chr16 11815433 - BCAR4 chr16 11914154 - Exonic hg19 MESO TCGA-ZN-A9VO 7 16 CDS-3'UTR Intra-chr p13.13 p13.13 38067 ChimerSeq STARFusion TCGA_RNA-Seq NRIP1-IGSF8 NRIP1 chr21 16386665 - IGSF8 chr1 160062485 - Exonic hg19 MESO TCGA-TS-A7OZ 6 15 5'UTR-CDS Inter-chr q21.1 q23.2 Seq+ 38068 ChimerSeq STARFusion TCGA_RNA-Seq MAPKBP1-EHD4 MAPKBP1 chr15 42092112 + EHD4 chr15 42202061 - Exonic hg19 MESO TCGA-TS-A7OZ 5 13 Out-of-frame Intra-chr q15.1 q15.1 Seq+ 38069 ChimerSeq STARFusion TCGA_RNA-Seq STK33-CHRNB4 STK33 chr11 8462225 - CHRNB4 chr15 79000447 - Exonic hg19 MESO TCGA-TS-A7OZ 4 9 CDS-5'UTR Inter-chr p15.4 CAMK:CAMK-Unique q25.1 Seq+ 38070 ChimerSeq STARFusion TCGA_RNA-Seq NRIP1-IGSF8 NRIP1 chr21 16386665 - IGSF8 chr1 160065036 - Exonic hg19 MESO TCGA-TS-A7OZ 2 14 5'UTR-CDS Inter-chr q21.1 q23.2 Seq+ 38071 ChimerSeq STARFusion TCGA_RNA-Seq EVA1C-TCP10L EVA1C chr21 33785321 + TCP10L chr21 33954725 - Exonic hg19 MESO TCGA-TS-A7OZ 2 7 Out-of-frame Intra-chr q22.11 q22.11 Seq+ 38072 ChimerSeq STARFusion TCGA_RNA-Seq RFX3-LOC100506422 RFX3 chr9 3525747 - LOC100506422 chr9 26066679 + Exonic hg19 MESO TCGA-SH-A7BC-01A 10 16 5'UTR-5'UTR Intra-chr p24.2 Transcription factor 38073 ChimerSeq STARFusion TCGA_RNA-Seq VLDLR-SLC1A1 VLDLR chr9 2622271 + SLC1A1 chr9 4544567 + Exonic hg19 MESO TCGA-SH-A7BC-01A 8 11 In-Frame Intra-chr p24.2 p24.2 Seq+ 38074 ChimerSeq STARFusion TCGA_RNA-Seq LRP12-SLC25A32 LRP12 chr8 105601047 - SLC25A32 chr8 104420012 - Exonic hg19 MESO TCGA-SH-A7BC-01A 4 1 In-Frame Intra-chr q22.3 q22.3 Seq+ 38075 ChimerSeq STARFusion TCGA_RNA-Seq HCP5-NCR3 HCP5 chr6 31368540 + NCR3 chr6 31557676 - Exonic hg19 MESO TCGA-XT-AASU 21 236 Out-of-frame Intra-chr p21.33 Seq+ 38076 ChimerSeq STARFusion TCGA_RNA-Seq HCP5-NCR3 HCP5 chr6 31368540 + NCR3 chr6 31557903 - Exonic hg19 MESO TCGA-XT-AASU 10 236 5'UTR-CDS Intra-chr p21.33 Seq+ 38077 ChimerSeq STARFusion TCGA_RNA-Seq HCP5-NCR3 HCP5 chr6 31368558 + NCR3 chr6 31557905 - Exonic hg19 MESO TCGA-XT-AASU 8 236 Out-of-frame Intra-chr p21.33 Seq+ 38078 ChimerSeq STARFusion TCGA_RNA-Seq HCP5-NCR3 HCP5 chr6 31368558 + NCR3 chr6 31557678 - Exonic hg19 MESO TCGA-XT-AASU 8 236 Out-of-frame Intra-chr p21.33 Seq+ 38079 ChimerSeq STARFusion TCGA_RNA-Seq HCP5-NCR3 HCP5 chr6 31368558 + NCR3 chr6 31560693 - Exonic hg19 MESO TCGA-XT-AASU 8 236 Out-of-frame Intra-chr p21.33 Seq+ 38080 ChimerSeq STARFusion TCGA_RNA-Seq HCP5-NCR3 HCP5 chr6 31368540 + NCR3 chr6 31560691 - Exonic hg19 MESO TCGA-XT-AASU 7 236 Out-of-frame Intra-chr p21.33 Seq+ 38081 ChimerSeq STARFusion TCGA_RNA-Seq HCP5-NCR3 HCP5 chr6 31368540 + NCR3 chr6 31560543 - Exonic hg19 MESO TCGA-XT-AASU 3 236 Out-of-frame Intra-chr p21.33 Seq+ 38082 ChimerSeq STARFusion TCGA_RNA-Seq HCP5-NCR3 HCP5 chr6 31368560 + NCR3 chr6 31560543 - Exonic hg19 MESO TCGA-XT-AASU 3 236 Out-of-frame Intra-chr p21.33 Seq+ 38083 ChimerSeq STARFusion TCGA_RNA-Seq KPNA1-NCK1 KPNA1 chr3 122215284 - NCK1 chr3 136646826 + Exonic hg19 MESO TCGA-XT-AASU 19 40 CDS-5'UTR Intra-chr q21.1 q22.3 Seq+ 38084 ChimerSeq STARFusion TCGA_RNA-Seq ZNF197-OSBPL10 ZNF197 chr3 44627705 + OSBPL10 chr3 32088095 - Exonic hg19 MESO TCGA-XT-AASU 2 2 Out-of-frame Intra-chr Transcription factor p22.3 Seq+ 38085 ChimerSeq STARFusion TCGA_RNA-Seq ZNF660-OSBPL10 ZNF660 chr3 44627705 + OSBPL10 chr3 32088095 - Exonic hg19 MESO TCGA-XT-AASU 2 2 5'UTR-5'UTR Intra-chr Transcription factor p22.3 Seq+ 38086 ChimerSeq STARFusion TCGA_RNA-Seq NT5C2-LRIT1 NT5C2 chr10 104899163 - LRIT1 chr10 85994134 - Exonic hg19 MESO TCGA-ZN-A9VQ 3 18 In-Frame Intra-chr q24.33 q23.1 Seq+ 38087 ChimerSeq STARFusion TCGA_RNA-Seq TMEM241-TTC39C TMEM241 chr18 20979530 - TTC39C chr18 21694518 + Exonic hg19 MESO TCGA-ZN-A9VQ 2 1 In-Frame Intra-chr q11.2 q11.2 Seq+ 38088 ChimerSeq STARFusion TCGA_RNA-Seq CDCA7L-PASD1 CDCA7L chr7 21956372 - PASD1 chrX 150828185 + Exonic hg19 MESO TCGA-ZN-A9VP 60 165 In-Frame Inter-chr p15.3 q28 Seq+ 38089 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010681 - TTC18 chr10 75016173 - Exonic hg19 MESO TCGA-ZN-A9VP 26 129 Out-of-frame Intra-chr q22.2 38090 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010573 - TTC18 chr10 75016174 - Exonic hg19 MESO TCGA-ZN-A9VP 13 129 3'UTR-CDS Intra-chr q22.2 38091 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75011521 - TTC18 chr10 75016174 - Exonic hg19 MESO TCGA-ZN-A9VP 7 129 Out-of-frame Intra-chr q22.2 38092 ChimerSeq STARFusion TCGA_RNA-Seq NCK2-NUP93 NCK2 chr2 106471745 + NUP93 chr16 56782146 + Exonic hg19 MESO TCGA-ZN-A9VP 6 49 CDS-5'UTR Inter-chr q12.2 q13 Seq+ 38093 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPUL1-DAB1 HNRNPUL1 chr19 41768487 + DAB1 chr1 58436537 - Exonic hg19 MESO TCGA-ZN-A9VP 5 7 5'UTR-5'UTR Inter-chr q13.2 p32.1 Seq+ 38094 ChimerSeq STARFusion TCGA_RNA-Seq PHLDB1-UBE4A PHLDB1 chr11 118503013 + UBE4A chr11 118243222 + Exonic hg19 MESO TCGA-ZN-A9VS 2 16 In-Frame Intra-chr q23.3 q23.3 Seq+ 38095 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125699 - CXCL16 chr17 4637313 - Exonic hg19 MESO TCGA-ZN-A9VU 3 3 Out-of-frame Inter-chr q12.2 p13.2 38096 ChimerSeq STARFusion TCGA_RNA-Seq SETD2-SPATA12 SETD2 chr3 47155366 - SPATA12 chr3 57107394 + Exonic hg19 MESO TCGA-ZN-A9VW 11 49 CDS-5'UTR Intra-chr p21.31 Oncogene Tumor suppressor gene p14.3 Seq+ 38097 ChimerSeq STARFusion TCGA_RNA-Seq DHX30-NT5DC2 DHX30 chr3 47870624 + NT5DC2 chr3 52562327 - Exonic hg19 OV TCGA-25-1326-01A 244 122 In-Frame Intra-chr p21.31 p21.1 Seq+ 38098 ChimerSeq STARFusion TCGA_RNA-Seq NEO1-CNRIP1 NEO1 chr15 73428368 + CNRIP1 chr2 68521158 - Exonic hg19 OV TCGA-25-1326-01A 113 55 Out-of-frame Inter-chr q24.1 p14 Seq+ 38099 ChimerSeq STARFusion TCGA_RNA-Seq RAB8A-TPM4 RAB8A chr19 16240414 + TPM4 chr19 16212074 + Exonic hg19 OV TCGA-25-1326-01A 104 41 Out-of-frame Intra-chr p13.11 p13.12 Seq+ 38100 ChimerSeq STARFusion TCGA_RNA-Seq CTSB-OR7E158P CTSB chr8 11708375 - OR7E158P chr8 11778219 - Exonic hg19 OV TCGA-25-1326-01A 18 12 Out-of-frame Intra-chr p23.1 p23.1 38101 ChimerSeq STARFusion TCGA_RNA-Seq TPSAB1-PRSS27 TPSAB1 chr16 1291991 + PRSS27 chr16 2762815 - Exonic hg19 OV TCGA-25-1326-01A 17 0 In-Frame Intra-chr p13.3 p13.3 38102 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC2-PSMC2 DNAJC2 chr7 102978183 - PSMC2 chr7 102996141 + Exonic hg19 OV TCGA-25-1326-01A 11 3 In-Frame Intra-chr q22.1 q22.1 Seq+ 38103 ChimerSeq STARFusion TCGA_RNA-Seq SCRN2-SP6 SCRN2 chr17 45918036 - SP6 chr17 45925852 - Exonic hg19 OV TCGA-25-1326-01A 10 3 CDS-5'UTR Intra-chr q21.32 q21.32 Transcription factor Seq+ 38104 ChimerSeq STARFusion TCGA_RNA-Seq SLC44A1-NIPSNAP3A SLC44A1 chr9 108007185 + NIPSNAP3A chr9 107513237 + Exonic hg19 OV TCGA-25-1326-01A 7 5 In-Frame Intra-chr q31.1 q31.1 Seq+ 38105 ChimerSeq STARFusion TCGA_RNA-Seq PTBP1-FGF22 PTBP1 chr19 808762 + FGF22 chr19 643235 + Exonic hg19 OV TCGA-25-1326-01A 6 7 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 38106 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPC-SUPT16H HNRNPC chr14 21698478 - SUPT16H chr14 21838647 - Exonic hg19 OV TCGA-25-1326-01A 6 6 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 38107 ChimerSeq STARFusion TCGA_RNA-Seq GMDS-LYZL1 GMDS chr6 2245555 - LYZL1 chr10 29580772 + Exonic hg19 OV TCGA-25-1326-01A 4 5 Out-of-frame Inter-chr p25.3 p12.1 38108 ChimerSeq STARFusion TCGA_RNA-Seq GPAA1-EXOSC4 GPAA1 chr8 145140041 + EXOSC4 chr8 145134630 + Exonic hg19 OV TCGA-25-1326-01A 3 8 Out-of-frame Intra-chr q24.3 q24.3 38109 ChimerSeq STARFusion TCGA_RNA-Seq EEF1D-PUF60 EEF1D chr8 144679518 - PUF60 chr8 144904083 - Exonic hg19 OV TCGA-25-2392-01A 53 1 5'UTR-5'UTR Intra-chr Seq+ 38110 ChimerSeq STARFusion TCGA_RNA-Seq SPECC1L-BCR SPECC1L chr22 24666951 + BCR chr22 23651611 + Exonic hg19 OV TCGA-25-2392-01A 37 6 5'UTR-CDS Intra-chr q11.23 q11.23 Atypical:BCR Oncogene Tumor suppressor gene Seq+ 38111 ChimerSeq STARFusion TCGA_RNA-Seq NUP35-KCNH7 NUP35 chr2 184016377 + KCNH7 chr2 163292107 - Exonic hg19 OV TCGA-25-2392-01A 32 1 Out-of-frame Intra-chr q32.1 q24.2 Seq+ 38112 ChimerSeq STARFusion TCGA_RNA-Seq MYO3B-TSHZ2 MYO3B chr2 171092646 + TSHZ2 chr20 52103683 + Exonic hg19 OV TCGA-25-2392-01A 31 4 CDS-3'UTR Inter-chr q31.1 STE:STE20 q13.2 Transcription factor Seq+ 38113 ChimerSeq STARFusion TCGA_RNA-Seq KTN1-LGALS3 KTN1 chr14 56047072 + LGALS3 chr14 55604088 + Exonic hg19 OV TCGA-25-2392-01A 17 9 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 38114 ChimerSeq STARFusion TCGA_RNA-Seq SPECC1L-BCR SPECC1L chr22 24672771 + BCR chr22 23651611 + Exonic hg19 OV TCGA-25-2392-01A 7 6 5'UTR-CDS Intra-chr q11.23 q11.23 Atypical:BCR Oncogene Tumor suppressor gene Seq+ 38115 ChimerSeq STARFusion TCGA_RNA-Seq KTN1-LGALS3 KTN1 chr14 56047072 + LGALS3 chr14 55604763 + Exonic hg19 OV TCGA-25-2392-01A 4 9 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 38116 ChimerSeq STARFusion TCGA_RNA-Seq KTN1-LGALS3 KTN1 chr14 56068598 + LGALS3 chr14 55604088 + Exonic hg19 OV TCGA-25-2392-01A 2 9 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 38117 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7B-SLC9A8 ZC3H7B chr22 41742212 + SLC9A8 chr20 48504366 + Exonic hg19 OV TCGA-61-2111-01A 42 9 In-Frame Inter-chr q13.2 q13.13 Seq+ 38118 ChimerSeq STARFusion TCGA_RNA-Seq CPD-MYL4 CPD chr17 28712254 + MYL4 chr17 45286755 + Exonic hg19 OV TCGA-61-2111-01A 41 9 CDS-5'UTR Intra-chr q11.2 Tumor suppressor gene q21.32 Seq+ 38119 ChimerSeq STARFusion TCGA_RNA-Seq ADSL-PVALB ADSL chr22 40742715 + PVALB chr22 37196962 - Exonic hg19 OV TCGA-61-2111-01A 40 9 Out-of-frame Intra-chr q13.1 Seq+ 38120 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-METTL16 YWHAE chr17 1303341 - METTL16 chr17 2405625 - Exonic hg19 OV TCGA-61-2111-01A 25 0 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 38121 ChimerSeq STARFusion TCGA_RNA-Seq PTPRF-PHF20 PTPRF chr1 44044591 + PHF20 chr20 34487292 + Exonic hg19 OV TCGA-61-2111-01A 22 6 In-Frame Inter-chr p34.2 q11.22 Transcription factor Seq+ 38122 ChimerSeq STARFusion TCGA_RNA-Seq SSBP3-TOX2 SSBP3 chr1 54867534 - TOX2 chr20 42679946 + Exonic hg19 OV TCGA-61-2111-01A 18 3 In-Frame Inter-chr p32.3 q13.12 Seq+ 38123 ChimerSeq STARFusion TCGA_RNA-Seq SNN-LITAF SNN chr16 11762396 + LITAF chr16 11650591 - Exonic hg19 OV TCGA-61-2111-01A 13 6 5'UTR-5'UTR Intra-chr p13.13 p13.13 Tumor suppressor gene Seq+ 38124 ChimerSeq STARFusion TCGA_RNA-Seq AMDHD2-COG7 AMDHD2 chr16 2571124 + COG7 chr16 23409450 - Exonic hg19 OV TCGA-61-2111-01A 11 3 In-Frame Intra-chr p13.3 p12.2 Seq+ 38125 ChimerSeq STARFusion TCGA_RNA-Seq ATP6C-COG7 ATP6C chr16 2571124 + COG7 chr16 23409450 - Exonic hg19 OV TCGA-61-2111-01A 11 3 Out-of-frame Intra-chr p12.2 38126 ChimerSeq STARFusion TCGA_RNA-Seq CBWD1-INSL6 CBWD1 chr9 175698 - INSL6 chr9 5164265 - Exonic hg19 OV TCGA-61-2111-01A 10 4 In-Frame Intra-chr p24.3 p24.1 Seq+ 38127 ChimerSeq STARFusion TCGA_RNA-Seq TMEM170B-ADTRP TMEM170B chr6 11538607 + ADTRP chr6 11723733 - Exonic hg19 OV TCGA-61-2111-01A 10 2 Out-of-frame Intra-chr p24.2 p24.1 Seq+ 38128 ChimerSeq STARFusion TCGA_RNA-Seq RBL1-CSTA RBL1 chr20 35717392 - CSTA chr3 122056394 + Exonic hg19 OV TCGA-61-2111-01A 10 0 Out-of-frame Inter-chr q11.23 Tumor suppressor gene q21.1 Seq+ 38129 ChimerSeq STARFusion TCGA_RNA-Seq CPD-MYL4 CPD chr17 28712254 + MYL4 chr17 45297270 + Exonic hg19 OV TCGA-61-2111-01A 7 9 In-Frame Intra-chr q11.2 Tumor suppressor gene q21.32 Seq+ 38130 ChimerSeq STARFusion TCGA_RNA-Seq ACTR3-POLR1B ACTR3 chr2 114647900 + POLR1B chr2 113316870 + Exonic hg19 OV TCGA-61-2111-01A 7 2 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 38131 ChimerSeq STARFusion TCGA_RNA-Seq IGF2BP3-P2RY14 IGF2BP3 chr7 23357258 - P2RY14 chr3 150937430 - Exonic hg19 OV TCGA-61-2111-01A 6 1 CDS-5'UTR Inter-chr p15.3 q25.1 Seq+ 38132 ChimerSeq STARFusion TCGA_RNA-Seq ACTR3-POLR1B ACTR3 chr2 114647900 + POLR1B chr2 113315487 + Exonic hg19 OV TCGA-61-2111-01A 4 2 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 38133 ChimerSeq STARFusion TCGA_RNA-Seq HECTD4-ZRSR1 HECTD4 chr12 112702979 - ZRSR1 chr5 112227300 + Exonic hg19 OV TCGA-61-2111-01A 4 2 Out-of-frame Inter-chr q24.13 q22.2 Seq+ 38134 ChimerSeq STARFusion TCGA_RNA-Seq ARID1A-NUDC ARID1A chr1 27059283 + NUDC chr1 27267948 + Exonic hg19 OV TCGA-24-1928-01A 112 16 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 Seq+ 38135 ChimerSeq STARFusion TCGA_RNA-Seq SMARCA4-CARM1 SMARCA4 chr19 11071850 + CARM1 chr19 11022860 + Exonic hg19 OV TCGA-24-1928-01A 47 9 5'UTR-CDS Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 38136 ChimerSeq STARFusion TCGA_RNA-Seq FAM47E-TMEM184B FAM47E chr4 77184996 + TMEM184B chr22 38644025 - Exonic hg19 OV TCGA-24-1928-01A 39 3 CDS-5'UTR Inter-chr q21.1 q13.1 Seq+ 38137 ChimerSeq STARFusion TCGA_RNA-Seq FAM47E-TMEM184B FAM47E chr4 77184996 + TMEM184B chr22 38644025 - Exonic hg19 OV TCGA-24-1928-01A 39 3 CDS-5'UTR Inter-chr q21.1 q13.1 Seq+ 38138 ChimerSeq STARFusion TCGA_RNA-Seq SRP68-EXOC7 SRP68 chr17 74053484 - EXOC7 chr17 74090662 - Exonic hg19 OV TCGA-24-1928-01A 30 5 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 38139 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-1928-01A 21 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38140 ChimerSeq STARFusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2017353 - COL1A1 chr17 48264063 - Exonic hg19 OV TCGA-24-1928-01A 11 32 Out-of-frame Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 38141 ChimerSeq STARFusion TCGA_RNA-Seq SRP68-EXOC7 SRP68 chr17 74063298 - EXOC7 chr17 74094099 - Exonic hg19 OV TCGA-24-1928-01A 17 5 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 38142 ChimerSeq STARFusion TCGA_RNA-Seq PPIL2-UBE2L3 PPIL2 chr22 22043138 + UBE2L3 chr22 21975804 + Exonic hg19 OV TCGA-24-1928-01A 14 2 Out-of-frame Intra-chr q11.21 q11.21 38143 ChimerSeq STARFusion TCGA_RNA-Seq DSC2-NINL DSC2 chr18 28666539 - NINL chr20 25507234 - Exonic hg19 OV TCGA-24-1928-01A 14 0 CDS-5'UTR Inter-chr q12.1 Tumor suppressor gene p11.21 Seq+ 38144 ChimerSeq STARFusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2017364 - COL1A1 chr17 48264072 - Exonic hg19 OV TCGA-24-1928-01A 6 31 Out-of-frame Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 38145 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB7C-RAB12 ZBTB7C chr18 45663378 - RAB12 chr18 8624936 + Exonic hg19 OV TCGA-24-1928-01A 11 4 5'UTR-CDS Intra-chr q21.1 Tumor suppressor gene Transcription factor p11.22 Seq+ 38146 ChimerSeq STARFusion TCGA_RNA-Seq TXNL1-GRP TXNL1 chr18 54278224 - GRP chr18 56892724 + Exonic hg19 OV TCGA-24-1928-01A 11 3 Out-of-frame Intra-chr q21.31 q21.32 Seq+ 38147 ChimerSeq STARFusion TCGA_RNA-Seq SYMPK-CRYL1 SYMPK chr19 46352008 - CRYL1 chr13 20987526 - Exonic hg19 OV TCGA-24-1928-01A 11 1 In-Frame Inter-chr q13.32 q12.11 Seq+ 38148 ChimerSeq STARFusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2016406 - COL1A1 chr17 48262637 - Exonic hg19 OV TCGA-24-1928-01A 3 31 3'UTR-3'UTR Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 38149 ChimerSeq STARFusion TCGA_RNA-Seq SPOP-SLC35B1 SPOP chr17 47755295 - SLC35B1 chr17 47783696 - Exonic hg19 OV TCGA-10-0928-01A 74 24 5'UTR-CDS Intra-chr q21.33 Oncogene Tumor suppressor gene q21.33 Seq+ 38150 ChimerSeq STARFusion TCGA_RNA-Seq PAX8-ZNF512 PAX8 chr2 114035947 - ZNF512 chr2 27820934 + Exonic hg19 OV TCGA-10-0928-01A 63 10 Out-of-frame Intra-chr q14.1 Oncogene Transcription factor p23.3 Transcription factor Seq+ 38151 ChimerSeq STARFusion TCGA_RNA-Seq SPOP-SLC35B1 SPOP chr17 47755295 - SLC35B1 chr17 47783671 - Exonic hg19 OV TCGA-10-0928-01A 35 24 5'UTR-CDS Intra-chr q21.33 Oncogene Tumor suppressor gene q21.33 Seq+ 38152 ChimerSeq STARFusion TCGA_RNA-Seq C19orf53-MRI1 C19orf53 chr19 13885521 + MRI1 chr19 13879173 + Exonic hg19 OV TCGA-10-0928-01A 33 11 Out-of-frame Intra-chr p13.13 p13.13 38153 ChimerSeq STARFusion TCGA_RNA-Seq PAX8-ZNF512 PAX8 chr2 114035947 - ZNF512 chr2 27820937 + Exonic hg19 OV TCGA-10-0928-01A 25 10 Out-of-frame Intra-chr q14.1 Oncogene Transcription factor p23.3 Transcription factor Seq+ 38154 ChimerSeq STARFusion TCGA_RNA-Seq CTTNBP2NL-SUCLA2 CTTNBP2NL chr1 112958886 + SUCLA2 chr13 48589384 - Exonic hg19 OV TCGA-10-0928-01A 22 9 CDS-5'UTR Inter-chr p13.2 q14.2 Seq+ 38155 ChimerSeq STARFusion TCGA_RNA-Seq CTTNBP2NL-SUCLA2 CTTNBP2NL chr1 112958886 + SUCLA2 chr13 48571158 - Exonic hg19 OV TCGA-10-0928-01A 16 7 In-Frame Inter-chr p13.2 q14.2 Seq+ 38156 ChimerSeq STARFusion TCGA_RNA-Seq PTPRJ-TAF3 PTPRJ chr11 48177671 + TAF3 chr10 8005883 + Exonic hg19 OV TCGA-10-0928-01A 15 5 Out-of-frame Inter-chr p11.2 Tumor suppressor gene p14 Seq+ 38157 ChimerSeq STARFusion TCGA_RNA-Seq LSM2-HSPA1L LSM2 chr6 31773852 - HSPA1L chr6 31779762 - Exonic hg19 OV TCGA-10-0928-01A 13 8 CDS-5'UTR Intra-chr Seq+ 38158 ChimerSeq STARFusion TCGA_RNA-Seq C19orf53-MRI1 C19orf53 chr19 13885521 + MRI1 chr19 13879375 + Exonic hg19 OV TCGA-10-0928-01A 12 11 Out-of-frame Intra-chr p13.13 p13.13 38159 ChimerSeq STARFusion TCGA_RNA-Seq MYRIP-S100A2 MYRIP chr3 40085762 + S100A2 chr1 153536363 - Exonic hg19 OV TCGA-10-0928-01A 10 3 CDS-5'UTR Inter-chr p22.1 q21.3 Tumor suppressor gene Seq+ 38160 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734946 - ZFHX3 chr16 72821634 - Exonic hg19 OV TCGA-10-0928-01A 9 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38161 ChimerSeq STARFusion TCGA_RNA-Seq SUCLA2-CTTNBP2NL SUCLA2 chr13 48575316 - CTTNBP2NL chr1 112991564 + Exonic hg19 OV TCGA-10-0928-01A 8 4 In-Frame Inter-chr q14.2 p13.2 Seq+ 38162 ChimerSeq STARFusion TCGA_RNA-Seq LSM2-HSPA1L LSM2 chr6 31774532 - HSPA1L chr6 31779762 - Exonic hg19 OV TCGA-10-0928-01A 5 8 CDS-5'UTR Intra-chr Seq+ 38163 ChimerSeq STARFusion TCGA_RNA-Seq CTTNBP2NL-SUCLA2 CTTNBP2NL chr1 112958886 + SUCLA2 chr13 48589388 - Exonic hg19 OV TCGA-10-0928-01A 4 9 CDS-5'UTR Inter-chr p13.2 q14.2 Seq+ 38164 ChimerSeq STARFusion TCGA_RNA-Seq FXR1-TTC14 FXR1 chr3 180630524 + TTC14 chr3 180320679 + Exonic hg19 OV TCGA-24-1550-01A 140 0 Out-of-frame Intra-chr q26.33 q26.33 Seq+ 38165 ChimerSeq STARFusion TCGA_RNA-Seq NFYC-CAP1 NFYC chr1 41157539 + CAP1 chr1 40525009 + Exonic hg19 OV TCGA-24-1550-01A 83 41 5'UTR-5'UTR Intra-chr p34.2 Transcription factor p34.2 Seq+ 38166 ChimerSeq STARFusion TCGA_RNA-Seq CLSTN1-SPA17 CLSTN1 chr1 9883701 - SPA17 chr11 124561592 + Exonic hg19 OV TCGA-24-1550-01A 82 28 Out-of-frame Inter-chr p36.22 q24.2 Seq+ 38167 ChimerSeq STARFusion TCGA_RNA-Seq FXR1-TTC14 FXR1 chr3 180630524 + TTC14 chr3 180319946 + Exonic hg19 OV TCGA-24-1550-01A 20 0 5'UTR-5'UTR Intra-chr q26.33 q26.33 Seq+ 38168 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-1550-01A 15 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38169 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-GPR149 IGL@ chr22 23055681 + GPR149 chr3 154146758 - Exonic hg19 OV TCGA-24-1550-01A 15 0 Out-of-frame Inter-chr q11.22 q25.2 38170 ChimerSeq STARFusion TCGA_RNA-Seq ATP8A2-CRYL1 ATP8A2 chr13 26436546 + CRYL1 chr13 20987526 - Exonic hg19 OV TCGA-24-1550-01A 13 5 In-Frame Intra-chr q12.13 q12.11 Seq+ 38171 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-CHEK2P5 RCC1 chr1 28834672 + CHEK2P5 chr10 39006328 + Exonic hg19 OV TCGA-24-1550-01A 12 0 Out-of-frame Inter-chr p35.3 p11.1 Seq+ 38172 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-CHEK2P5 SNHG3 chr1 28834672 + CHEK2P5 chr10 39006328 + Exonic hg19 OV TCGA-24-1550-01A 12 0 Out-of-frame Inter-chr p35.3 p11.1 Seq+ 38173 ChimerSeq STARFusion TCGA_RNA-Seq PPARA-POLDIP3 PPARA chr22 46547873 + POLDIP3 chr22 42983578 - Exonic hg19 OV TCGA-30-1857-01A 28 0 5'UTR-CDS Intra-chr q13.31 Tumor suppressor gene Transcription factor q13.2 Seq+ 38174 ChimerSeq STARFusion TCGA_RNA-Seq L1CAM-TEX28 L1CAM chrX 153128225 - TEX28 chrX 153499436 - Exonic hg19 OV TCGA-30-1857-01A 17 0 Out-of-frame Intra-chr q28 q28 38175 ChimerSeq STARFusion TCGA_RNA-Seq LAMA5-CYSTM1 LAMA5 chr20 60904194 - CYSTM1 chr5 139622890 + Exonic hg19 OV TCGA-30-1857-01A 12 1 Out-of-frame Inter-chr q13.33 q31.3 Seq+ 38176 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-NKAIN1 PUM1 chr1 31501643 - NKAIN1 chr1 31661034 - Exonic hg19 OV TCGA-30-1857-01A 12 0 In-Frame Intra-chr p35.2 p35.2 Seq+ 38177 ChimerSeq STARFusion TCGA_RNA-Seq SCAF1-MED25 SCAF1 chr19 50145499 + MED25 chr19 50338243 + Exonic hg19 OV TCGA-24-1464-01A 57 0 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 38178 ChimerSeq STARFusion TCGA_RNA-Seq WDHD1-LGALS3 WDHD1 chr14 55493429 - LGALS3 chr14 55606993 + Exonic hg19 OV TCGA-24-1464-01A 33 1 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 38179 ChimerSeq STARFusion TCGA_RNA-Seq WDHD1-LGALS3 WDHD1 chr14 55493746 - LGALS3 chr14 55606993 + Exonic hg19 OV TCGA-24-1464-01A 20 1 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 38180 ChimerSeq STARFusion TCGA_RNA-Seq SCAF1-MED25 SCAF1 chr19 50145963 + MED25 chr19 50338243 + Exonic hg19 OV TCGA-24-1464-01A 15 0 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 38181 ChimerSeq STARFusion TCGA_RNA-Seq EEF1D-TSNARE1 EEF1D chr8 144679518 - TSNARE1 chr8 143310940 - Exonic hg19 OV TCGA-23-1110-01A 121 5 5'UTR-CDS Intra-chr q24.3 Seq+ 38182 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-GALNS ANKRD11 chr16 89484692 - GALNS chr16 88909237 - Exonic hg19 OV TCGA-23-1110-01A 23 7 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 38183 ChimerSeq STARFusion TCGA_RNA-Seq EEF1D-TSNARE1 EEF1D chr8 144679518 - TSNARE1 chr8 143313362 - Exonic hg19 OV TCGA-23-1110-01A 17 5 5'UTR-CDS Intra-chr q24.3 Seq+ 38184 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-23-1110-01A 13 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38185 ChimerSeq STARFusion TCGA_RNA-Seq IP6K2-COL7A1 IP6K2 chr3 48752822 - COL7A1 chr3 48623408 - Exonic hg19 OV TCGA-23-1110-01A 10 5 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 38186 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-GALNS ANKRD11 chr16 89484692 - GALNS chr16 88908379 - Exonic hg19 OV TCGA-23-1110-01A 8 7 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 38187 ChimerSeq STARFusion TCGA_RNA-Seq DDT-PAK1 DDT chr22 24315957 - PAK1 chr11 77066887 - Exonic hg19 OV TCGA-23-1110-01A 5 4 Out-of-frame Inter-chr q14.1 STE:STE20 Seq+ 38188 ChimerSeq STARFusion TCGA_RNA-Seq DDTL-PAK1 DDTL chr22 24309749 + PAK1 chr11 77066887 - Exonic hg19 OV TCGA-23-1110-01A 5 4 Out-of-frame Inter-chr q14.1 STE:STE20 38189 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-23-1110-01A 5 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38190 ChimerSeq STARFusion TCGA_RNA-Seq CCDC41-BNC2 CCDC41 chr12 94725478 - BNC2 chr9 16583085 - Exonic hg19 OV TCGA-23-1110-01A 3 1 Out-of-frame Inter-chr p22.2 Transcription factor 38191 ChimerSeq STARFusion TCGA_RNA-Seq IP6K2-COL7A1 IP6K2 chr3 48752748 - COL7A1 chr3 48623408 - Exonic hg19 OV TCGA-23-1110-01A 2 5 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 38192 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC9-KIAA1217 DNAJC9 chr10 75005785 - KIAA1217 chr10 24822114 + Exonic hg19 OV TCGA-23-1110-01A 3 0 Out-of-frame Intra-chr q22.2 p12.2 38193 ChimerSeq STARFusion TCGA_RNA-Seq KBTBD2-NT5C3A KBTBD2 chr7 32919047 - NT5C3A chr7 33057213 - Exonic hg19 OV TCGA-13-1496-01A 15 2 Out-of-frame Intra-chr p14.3 p14.3 Seq+ 38194 ChimerSeq STARFusion TCGA_RNA-Seq ZNF833P-AAGAB ZNF833P chr19 11750711 + AAGAB chr15 67524235 - Exonic hg19 OV TCGA-13-1496-01A 7 1 5'UTR-CDS Inter-chr p13.2 q23 38195 ChimerSeq STARFusion TCGA_RNA-Seq PCNXL3-CXCR2 PCNXL3 chr11 65395053 + CXCR2 chr2 218995553 + Exonic hg19 OV TCGA-13-1496-01A 5 2 CDS-5'UTR Inter-chr q35 Tumor suppressor gene 38196 ChimerSeq STARFusion TCGA_RNA-Seq SUPT5H-CATSPERG SUPT5H chr19 39936582 + CATSPERG chr19 38855583 + Exonic hg19 OV TCGA-29-1766-01A 25 0 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 38197 ChimerSeq STARFusion TCGA_RNA-Seq NUMB-HEATR4 NUMB chr14 73925199 - HEATR4 chr14 73945547 - Exonic hg19 OV TCGA-29-1766-01A 22 0 5'UTR-CDS Intra-chr q24.3 Tumor suppressor gene q24.3 Seq+ 38198 ChimerSeq STARFusion TCGA_RNA-Seq CCBE1-SKAP1 CCBE1 chr18 57363861 - SKAP1 chr17 46441176 - Exonic hg19 OV TCGA-04-1648-01A 5 8 In-Frame Inter-chr q21.32 q21.32 Seq+ 38199 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821632 - Exonic hg19 OV TCGA-13-1509-01A 51 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38200 ChimerSeq STARFusion TCGA_RNA-Seq NAA60-IL32 NAA60 chr16 3415182 + IL32 chr16 3131634 + Exonic hg19 OV TCGA-13-1509-01A 35 3 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 38201 ChimerSeq STARFusion TCGA_RNA-Seq NOP56-CNFN NOP56 chr20 2633574 + CNFN chr19 42903467 - Exonic hg19 OV TCGA-13-1509-01A 27 30 Out-of-frame Inter-chr p13 q13.2 38202 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-13-1509-01A 24 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38203 ChimerSeq STARFusion TCGA_RNA-Seq MIR1292-CNFN MIR1292 chr20 2633574 + CNFN chr19 42903467 - Exonic hg19 OV TCGA-13-1509-01A 11 24 Out-of-frame Inter-chr p13 q13.2 38204 ChimerSeq STARFusion TCGA_RNA-Seq NAA60-IL32 NAA60 chr16 3415182 + IL32 chr16 3118991 + Exonic hg19 OV TCGA-13-1509-01A 15 2 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 38205 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069803 - Exonic hg19 OV TCGA-13-1509-01A 14 0 Out-of-frame Inter-chr q12.3 q32.2 38206 ChimerSeq STARFusion TCGA_RNA-Seq AAK1-C2orf42 AAK1 chr2 69783992 - C2orf42 chr2 70377696 - Exonic hg19 OV TCGA-24-1423-01A 367 130 Out-of-frame Intra-chr p13.3 Other:NAK p13.3 Seq+ 38207 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-1423-01A 50 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38208 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-24-1423-01A 46 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38209 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-24-1423-01A 45 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38210 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069803 - Exonic hg19 OV TCGA-24-1423-01A 39 0 Out-of-frame Inter-chr q12.3 q32.2 38211 ChimerSeq STARFusion TCGA_RNA-Seq MICU1-TSPAN15 MICU1 chr10 74234858 - TSPAN15 chr10 71243447 + Exonic hg19 OV TCGA-24-1423-01A 25 10 In-Frame Intra-chr q22.1 q22.1 Seq+ 38212 ChimerSeq STARFusion TCGA_RNA-Seq LINC00176-PRPF6 LINC00176 chr20 62669555 + PRPF6 chr20 62632430 + Exonic hg19 OV TCGA-24-1423-01A 20 3 5'UTR-CDS Intra-chr q13.33 38213 ChimerSeq STARFusion TCGA_RNA-Seq AMFR-BBS2 AMFR chr16 56435645 - BBS2 chr16 56518779 - Exonic hg19 OV TCGA-24-1423-01A 11 7 5'UTR-CDS Intra-chr q13 q13 Seq+ 38214 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-TRAPPC9 AGO2 chr8 141595218 - TRAPPC9 chr8 141301177 - Exonic hg19 OV TCGA-29-1705-02A 57 4 Out-of-frame Intra-chr q24.3 q24.3 38215 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61612311 - ANK3 chr10 62039397 - Exonic hg19 OV TCGA-29-1705-02A 23 2 In-Frame Intra-chr q21.2 q21.2 Seq+ 38216 ChimerSeq STARFusion TCGA_RNA-Seq XPOT-C12orf56 XPOT chr12 64803875 + C12orf56 chr12 64746836 - Exonic hg19 OV TCGA-09-2051-01A 96 11 In-Frame Intra-chr q14.2 q14.2 Seq+ 38217 ChimerSeq STARFusion TCGA_RNA-Seq FDFT1-GATA4 FDFT1 chr8 11667359 + GATA4 chr8 11612555 + Exonic hg19 OV TCGA-09-2051-01A 65 6 In-Frame Intra-chr p23.1 p23.1 Tumor suppressor gene Transcription factor Seq+ 38218 ChimerSeq STARFusion TCGA_RNA-Seq SPIDR-TGFB1 SPIDR chr8 48206619 + TGFB1 chr19 41838186 - Exonic hg19 OV TCGA-09-2051-01A 61 6 Out-of-frame Inter-chr q11.21 q13.2 Tumor suppressor gene Seq+ 38219 ChimerSeq STARFusion TCGA_RNA-Seq CCDC85A-EYA2 CCDC85A chr2 56570090 + EYA2 chr20 45771698 + Exonic hg19 OV TCGA-09-2051-01A 17 0 In-Frame Inter-chr p16.1 q13.12 Seq+ 38220 ChimerSeq STARFusion TCGA_RNA-Seq DTX4-MS4A1 DTX4 chr11 58949935 + MS4A1 chr11 60229832 + Exonic hg19 OV TCGA-09-2051-01A 15 3 CDS-5'UTR Intra-chr q12.1 q12.2 Seq+ 38221 ChimerSeq STARFusion TCGA_RNA-Seq KAZN-TMEM51 KAZN chr1 15251068 + TMEM51 chr1 15541391 + Exonic hg19 OV TCGA-09-2051-01A 13 5 CDS-5'UTR Intra-chr p36.21 p36.21 Seq+ 38222 ChimerSeq STARFusion TCGA_RNA-Seq KAZN-TMEM51 KAZN chr1 15251068 + TMEM51 chr1 15536986 + Exonic hg19 OV TCGA-09-2051-01A 13 5 CDS-5'UTR Intra-chr p36.21 p36.21 Seq+ 38223 ChimerSeq STARFusion TCGA_RNA-Seq CCDC91-PPFIBP1 CCDC91 chr12 28343574 + PPFIBP1 chr12 27731085 + Exonic hg19 OV TCGA-09-2051-01A 13 1 5'UTR-5'UTR Intra-chr p11.22 p11.23 38224 ChimerSeq STARFusion TCGA_RNA-Seq KPNA6-C6orf48 KPNA6 chr1 32573735 + C6orf48 chr6 31803188 + Exonic hg19 OV TCGA-13-0913-02A 21 10 CDS-5'UTR Inter-chr p35.2 Seq+ 38225 ChimerSeq STARFusion TCGA_RNA-Seq RABL6-TMEM141 RABL6 chr9 139702778 + TMEM141 chr9 139686703 + Exonic hg19 OV TCGA-13-0913-02A 8 2 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 38226 ChimerSeq STARFusion TCGA_RNA-Seq RABL6-TMEM141 RABL6 chr9 139702778 + TMEM141 chr9 139686399 + Exonic hg19 OV TCGA-13-0913-02A 4 2 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 38227 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA3-OSBPL6 PLEKHA3 chr2 179345636 + OSBPL6 chr2 179236853 + Exonic hg19 OV TCGA-13-0913-02A 3 5 Out-of-frame Intra-chr q31.2 q31.2 Seq+ 38228 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPA3P11-YBX3 HNRNPA3P11 chr15 57539130 - YBX3 chr12 10875925 - Exonic hg19 OV TCGA-13-0913-02A 4 0 Out-of-frame Inter-chr q21.3 p13.2 Transcription factor 38229 ChimerSeq STARFusion TCGA_RNA-Seq MYL6-RPS20 MYL6 chr12 56553842 + RPS20 chr8 56986711 - Exonic hg19 OV TCGA-13-0913-02A 4 0 Out-of-frame Inter-chr q13.2 q12.1 38230 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA3-OSBPL6 PLEKHA3 chr2 179345636 + OSBPL6 chr2 179238617 + Exonic hg19 OV TCGA-13-0913-02A 2 4 Out-of-frame Intra-chr q31.2 q31.2 Seq+ 38231 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-1555-01A 53 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38232 ChimerSeq STARFusion TCGA_RNA-Seq SRGAP3-OXTR SRGAP3 chr3 9290569 - OXTR chr3 8810277 - Exonic hg19 OV TCGA-24-1555-01A 46 19 CDS-5'UTR Intra-chr p25.3 Tumor suppressor gene p25.3 Seq+ 38233 ChimerSeq STARFusion TCGA_RNA-Seq SCD5-PLAC8 SCD5 chr4 83719459 - PLAC8 chr4 84026173 - Exonic hg19 OV TCGA-24-1555-01A 41 16 In-Frame Intra-chr q21.22 q21.22 Seq+ 38234 ChimerSeq STARFusion TCGA_RNA-Seq ESCO1-FAM65C ESCO1 chr18 19180584 - FAM65C chr20 49247393 - Exonic hg19 OV TCGA-24-1555-01A 15 14 5'UTR-5'UTR Inter-chr q11.2 Seq+ 38235 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-24-1555-01A 18 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38236 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-EIF3K ACTN4 chr19 39198835 + EIF3K chr19 39109786 + Exonic hg19 OV TCGA-24-1552-01A 200 59 CDS-5'UTR Intra-chr Seq+ 38237 ChimerSeq STARFusion TCGA_RNA-Seq TSC2-RBP1 TSC2 chr16 2108874 + RBP1 chr3 139258674 - Exonic hg19 OV TCGA-24-1552-01A 73 27 CDS-5'UTR Inter-chr p13.3 Oncogene Tumor suppressor gene q23 Tumor suppressor gene Seq+ 38238 ChimerSeq STARFusion TCGA_RNA-Seq NUDT19-SLC7A9 NUDT19 chr19 33183580 + SLC7A9 chr19 33324229 - Exonic hg19 OV TCGA-24-1552-01A 62 25 In-Frame Intra-chr q13.11 q13.11 Seq+ 38239 ChimerSeq STARFusion TCGA_RNA-Seq NNT-NIM1 NNT chr5 43628489 + NIM1 chr5 43277159 + Exonic hg19 OV TCGA-24-1552-01A 22 13 In-Frame Intra-chr p12 CAMK:CAMKL Seq+ 38240 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069803 - Exonic hg19 OV TCGA-24-1552-01A 24 0 Out-of-frame Inter-chr q12.3 q32.2 38241 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-1552-01A 17 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38242 ChimerSeq STARFusion TCGA_RNA-Seq DSTN-SLC24A3 DSTN chr20 17581690 + SLC24A3 chr20 19560644 + Exonic hg19 OV TCGA-24-1552-01A 12 3 Out-of-frame Intra-chr p12.1 p11.23 Seq+ 38243 ChimerSeq STARFusion TCGA_RNA-Seq FBXO36-ALCAM FBXO36 chr2 230787322 + ALCAM chr3 105290693 + Exonic hg19 OV TCGA-24-1552-01A 11 5 Out-of-frame Inter-chr q36.3 q13.11 Seq+ 38244 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-24-1552-01A 11 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38245 ChimerSeq STARFusion TCGA_RNA-Seq SLC24A3-DSTN SLC24A3 chr20 19566188 + DSTN chr20 17585200 + Exonic hg19 OV TCGA-24-1552-01A 9 4 Out-of-frame Intra-chr p11.23 p12.1 Seq+ 38246 ChimerSeq STARFusion TCGA_RNA-Seq ZNF317-AP3D1 ZNF317 chr19 9251268 + AP3D1 chr19 2115612 - Exonic hg19 OV TCGA-13-1405-01A 297 34 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.3 Seq+ 38247 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2B-CRTC2 GATAD2B chr1 153895209 - CRTC2 chr1 153921860 - Exonic hg19 OV TCGA-13-1405-01A 134 52 5'UTR-CDS Intra-chr Transcription factor q21.3 Seq+ 38248 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-SEC14L1 SEPT9 chr17 75303279 + SEC14L1 chr17 75186885 + Exonic hg19 OV TCGA-13-1405-01A 114 76 Out-of-frame Intra-chr q25.2 Seq+ 38249 ChimerSeq STARFusion TCGA_RNA-Seq ETHE1-UPK3A ETHE1 chr19 44030667 - UPK3A chr22 45691441 + Exonic hg19 OV TCGA-13-1405-01A 112 53 Out-of-frame Inter-chr q13.31 q13.31 Seq+ 38250 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-13-1405-01A 113 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38251 ChimerSeq STARFusion TCGA_RNA-Seq CABIN1-SMARCB1 CABIN1 chr22 24408178 + SMARCB1 chr22 24175759 + Exonic hg19 OV TCGA-13-1405-01A 108 15 5'UTR-CDS Intra-chr q11.23 Oncogene Tumor suppressor gene Seq+ 38252 ChimerSeq STARFusion TCGA_RNA-Seq PPP1CB-PLB1 PPP1CB chr2 28999848 + PLB1 chr2 28820872 + Exonic hg19 OV TCGA-13-1405-01A 89 29 Out-of-frame Intra-chr p23.2 p23.2 Seq+ 38253 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-13-1405-01A 90 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38254 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-CHRM1 FCHSD2 chr11 72851076 - CHRM1 chr11 62678650 - Exonic hg19 OV TCGA-13-1405-01A 81 33 CDS-5'UTR Intra-chr q13.4 q12.3 Seq+ 38255 ChimerSeq STARFusion TCGA_RNA-Seq ETHE1-UPK3A ETHE1 chr19 44030353 - UPK3A chr22 45691441 + Exonic hg19 OV TCGA-13-1405-01A 74 53 Out-of-frame Inter-chr q13.31 q13.31 Seq+ 38256 ChimerSeq STARFusion TCGA_RNA-Seq RALY-TMEM248 RALY chr20 32581937 + TMEM248 chr7 66406835 + Exonic hg19 OV TCGA-13-1405-01A 66 15 Out-of-frame Inter-chr q11.22 q11.21 Seq+ 38257 ChimerSeq STARFusion TCGA_RNA-Seq TMEM248-RALY TMEM248 chr7 66386448 + RALY chr20 32619328 + Exonic hg19 OV TCGA-13-1405-01A 63 17 Out-of-frame Inter-chr q11.21 q11.22 Seq+ 38258 ChimerSeq STARFusion TCGA_RNA-Seq MUC16-THADA MUC16 chr19 9064570 - THADA chr2 43732874 - Exonic hg19 OV TCGA-13-1405-01A 52 46 Out-of-frame Inter-chr p13.2 p21 Seq+ 38259 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2B-CRTC2 GATAD2B chr1 153895209 - CRTC2 chr1 153921120 - Exonic hg19 OV TCGA-13-1405-01A 50 52 5'UTR-CDS Intra-chr Transcription factor q21.3 Seq+ 38260 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-13-1405-01A 60 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38261 ChimerSeq STARFusion TCGA_RNA-Seq CABIN1-SMARCB1 CABIN1 chr22 24407817 + SMARCB1 chr22 24175759 + Exonic hg19 OV TCGA-13-1405-01A 42 15 5'UTR-CDS Intra-chr q11.23 Oncogene Tumor suppressor gene Seq+ 38262 ChimerSeq STARFusion TCGA_RNA-Seq RAB3IL1-AHNAK RAB3IL1 chr11 61669914 - AHNAK chr11 62203955 - Exonic hg19 OV TCGA-13-1405-01A 33 27 CDS-3'UTR Intra-chr q12.3 q12.3 Tumor suppressor gene Seq+ 38263 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-SEC14L1 SEPT9 chr17 75316430 + SEC14L1 chr17 75186885 + Exonic hg19 OV TCGA-13-1405-01A 21 74 Out-of-frame Intra-chr q25.2 Seq+ 38264 ChimerSeq STARFusion TCGA_RNA-Seq MUC16-THADA MUC16 chr19 9064535 - THADA chr2 43734221 - Exonic hg19 OV TCGA-13-1405-01A 23 46 Out-of-frame Inter-chr p13.2 p21 Seq+ 38265 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D7-GFOD1 TBC1D7 chr6 13305294 - GFOD1 chr6 13358321 - Exonic hg19 OV TCGA-13-1405-01A 32 10 Out-of-frame Intra-chr p24.1 p23 38266 ChimerSeq STARFusion TCGA_RNA-Seq POU2F1-MAEL POU2F1 chr1 167190195 + MAEL chr1 166960615 + Exonic hg19 OV TCGA-13-1405-01A 32 3 Out-of-frame Intra-chr q24.2 Transcription factor q24.1 Seq+ 38267 ChimerSeq STARFusion TCGA_RNA-Seq MUC16-THADA MUC16 chr19 9064921 - THADA chr2 43732874 - Exonic hg19 OV TCGA-13-1405-01A 18 46 Out-of-frame Inter-chr p13.2 p21 Seq+ 38268 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069803 - Exonic hg19 OV TCGA-13-1405-01A 24 0 Out-of-frame Inter-chr q12.3 q32.2 38269 ChimerSeq STARFusion TCGA_RNA-Seq PPP1CB-PLB1 PPP1CB chr2 28999848 + PLB1 chr2 28820877 + Exonic hg19 OV TCGA-13-1405-01A 14 29 Out-of-frame Intra-chr p23.2 p23.2 Seq+ 38270 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-HTR3C EPB41L1 chr20 34710669 + HTR3C chr3 183774663 + Exonic hg19 OV TCGA-13-1405-01A 12 36 5'UTR-CDS Inter-chr q11.23 q27.1 Seq+ 38271 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-HTR3C EPB41L1 chr20 34700402 + HTR3C chr3 183773100 + Exonic hg19 OV TCGA-13-1405-01A 11 35 5'UTR-CDS Inter-chr q11.23 q27.1 Seq+ 38272 ChimerSeq STARFusion TCGA_RNA-Seq AKAP13-NOX5 AKAP13 chr15 85924029 + NOX5 chr15 69318868 + Exonic hg19 OV TCGA-13-1405-01A 18 4 5'UTR-5'UTR Intra-chr q25.3 q23 Seq+ 38273 ChimerSeq STARFusion TCGA_RNA-Seq CDC42-LDLRAD2 CDC42 chr1 22408287 + LDLRAD2 chr1 22147943 + Exonic hg19 OV TCGA-13-1405-01A 17 5 In-Frame Intra-chr p36.12 p36.12 38274 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-HTR3C EPB41L1 chr20 34700402 + HTR3C chr3 183774663 + Exonic hg19 OV TCGA-13-1405-01A 9 35 5'UTR-CDS Inter-chr q11.23 q27.1 Seq+ 38275 ChimerSeq STARFusion TCGA_RNA-Seq MUC16-THADA MUC16 chr19 9064550 - THADA chr2 43732874 - Exonic hg19 OV TCGA-13-1405-01A 6 46 Out-of-frame Inter-chr p13.2 p21 Seq+ 38276 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-CHRM1 FCHSD2 chr11 72852902 - CHRM1 chr11 62678650 - Exonic hg19 OV TCGA-13-1405-01A 9 33 CDS-5'UTR Intra-chr q13.4 q12.3 Seq+ 38277 ChimerSeq STARFusion TCGA_RNA-Seq NEK6-LHX2 NEK6 chr9 127020364 + LHX2 chr9 126776240 + Exonic hg19 OV TCGA-13-1405-01A 15 8 5'UTR-CDS Intra-chr q33.3 Other:NEK q33.3 Transcription factor 38278 ChimerSeq STARFusion TCGA_RNA-Seq TSHZ2-PIGU TSHZ2 chr20 51872983 + PIGU chr20 33245048 - Exonic hg19 OV TCGA-13-1405-01A 15 8 Out-of-frame Intra-chr q13.2 Transcription factor q11.22 Seq+ 38279 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D7-GFOD1 TBC1D7 chr6 13305294 - GFOD1 chr6 13358366 - Exonic hg19 OV TCGA-13-1405-01A 14 10 Out-of-frame Intra-chr p24.1 p23 38280 ChimerSeq STARFusion TCGA_RNA-Seq PLA2R1-RBMS1P1 PLA2R1 chr2 160918806 - RBMS1P1 chr12 66628998 - Exonic hg19 OV TCGA-13-1405-01A 15 3 Out-of-frame Inter-chr q24.2 Tumor suppressor gene q14.3 38281 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-HTR3C EPB41L1 chr20 34751306 + HTR3C chr3 183772509 + Exonic hg19 OV TCGA-13-1405-01A 6 35 5'UTR-CDS Inter-chr q11.23 q27.1 Seq+ 38282 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-HTR3C EPB41L1 chr20 34713449 + HTR3C chr3 183773100 + Exonic hg19 OV TCGA-13-1405-01A 6 35 In-Frame Inter-chr q11.23 q27.1 Seq+ 38283 ChimerSeq STARFusion TCGA_RNA-Seq IFITM10-CFL1 IFITM10 chr11 1768897 - CFL1 chr11 65594080 - Exonic hg19 OV TCGA-13-1405-01A 13 4 CDS-3'UTR Intra-chr q13.1 Seq+ 38284 ChimerSeq STARFusion TCGA_RNA-Seq PIDD-POLR2L PIDD chr11 799155 - POLR2L chr11 840134 - Exonic hg19 OV TCGA-13-1405-01A 13 0 Out-of-frame Intra-chr p15.5 38285 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-HTR3C EPB41L1 chr20 34710669 + HTR3C chr3 183772509 + Exonic hg19 OV TCGA-13-1405-01A 4 35 5'UTR-CDS Inter-chr q11.23 q27.1 Seq+ 38286 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-HTR3C EPB41L1 chr20 34713449 + HTR3C chr3 183774663 + Exonic hg19 OV TCGA-13-1405-01A 4 35 Out-of-frame Inter-chr q11.23 q27.1 Seq+ 38287 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-HTR3C EPB41L1 chr20 34680735 + HTR3C chr3 183772509 + Exonic hg19 OV TCGA-13-1405-01A 4 35 5'UTR-CDS Inter-chr q11.23 q27.1 Seq+ 38288 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-HTR3C EPB41L1 chr20 34700402 + HTR3C chr3 183772509 + Exonic hg19 OV TCGA-13-1405-01A 4 35 5'UTR-CDS Inter-chr q11.23 q27.1 Seq+ 38289 ChimerSeq STARFusion TCGA_RNA-Seq POU2F1-MAEL POU2F1 chr1 167190195 + MAEL chr1 166958638 + Exonic hg19 OV TCGA-13-1405-01A 12 3 In-Frame Intra-chr q24.2 Transcription factor q24.1 Seq+ 38290 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-HTR3C EPB41L1 chr20 34713449 + HTR3C chr3 183772509 + Exonic hg19 OV TCGA-13-1405-01A 3 35 Out-of-frame Inter-chr q11.23 q27.1 Seq+ 38291 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-HTR3C EPB41L1 chr20 34700402 + HTR3C chr3 183773965 + Exonic hg19 OV TCGA-13-1405-01A 3 35 5'UTR-CDS Inter-chr q11.23 q27.1 Seq+ 38292 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC17-INO80 DNAJC17 chr15 41065925 - INO80 chr15 41297885 - Exonic hg19 OV TCGA-13-1405-01A 11 2 In-Frame Intra-chr q15.1 q15.1 Seq+ 38293 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-HTR3C EPB41L1 chr20 34742818 + HTR3C chr3 183773100 + Exonic hg19 OV TCGA-13-1405-01A 2 35 5'UTR-CDS Inter-chr q11.23 q27.1 Seq+ 38294 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-HTR3C EPB41L1 chr20 34680735 + HTR3C chr3 183774663 + Exonic hg19 OV TCGA-13-1405-01A 2 35 5'UTR-CDS Inter-chr q11.23 q27.1 Seq+ 38295 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-HTR3C EPB41L1 chr20 34710669 + HTR3C chr3 183773100 + Exonic hg19 OV TCGA-13-1405-01A 2 35 5'UTR-CDS Inter-chr q11.23 q27.1 Seq+ 38296 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-HTR3C EPB41L1 chr20 34742818 + HTR3C chr3 183772509 + Exonic hg19 OV TCGA-13-1405-01A 2 35 5'UTR-CDS Inter-chr q11.23 q27.1 Seq+ 38297 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-HTR3C EPB41L1 chr20 34680735 + HTR3C chr3 183773965 + Exonic hg19 OV TCGA-13-1405-01A 2 35 5'UTR-CDS Inter-chr q11.23 q27.1 Seq+ 38298 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R15B-PIK3C2B PPP1R15B chr1 204378620 - PIK3C2B chr1 204439014 - Exonic hg19 OV TCGA-13-1405-01A 9 6 CDS-5'UTR Intra-chr q32.1 q32.1 Oncogene Seq+ 38299 ChimerSeq STARFusion TCGA_RNA-Seq TAB1-SMG9 TAB1 chr22 39817976 + SMG9 chr19 44254899 - Exonic hg19 OV TCGA-13-1405-01A 9 3 CDS-5'UTR Inter-chr q13.1 q13.31 Seq+ 38300 ChimerSeq STARFusion TCGA_RNA-Seq HMGXB3-PPARGC1B HMGXB3 chr5 149386210 + PPARGC1B chr5 149199996 + Exonic hg19 OV TCGA-13-1405-01A 8 4 In-Frame Intra-chr q32 q32 Seq+ 38301 ChimerSeq STARFusion TCGA_RNA-Seq USP33-FUBP1 USP33 chr1 78225328 - FUBP1 chr1 78435699 - Exonic hg19 OV TCGA-13-1405-01A 7 7 5'UTR-CDS Intra-chr p31.1 Tumor suppressor gene p31.1 Oncogene Seq+ 38302 ChimerSeq STARFusion TCGA_RNA-Seq TSHZ2-PIGU TSHZ2 chr20 51873110 + PIGU chr20 33245048 - Exonic hg19 OV TCGA-13-1405-01A 5 8 3'UTR-CDS Intra-chr q13.2 Transcription factor q11.22 Seq+ 38303 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-57-1585-01A 38 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38304 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-57-1585-01A 32 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38305 ChimerSeq STARFusion TCGA_RNA-Seq CAPZA2-C7orf33 CAPZA2 chr7 116538889 + C7orf33 chr7 148311134 + Exonic hg19 OV TCGA-57-1585-01A 25 7 In-Frame Intra-chr q31.2 q36.1 Seq+ 38306 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-57-1585-01A 19 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38307 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-POM121C AGO2 chr8 141645584 - POM121C chr7 75055735 - Exonic hg19 OV TCGA-57-1585-01A 17 1 Out-of-frame Inter-chr q24.3 q11.23 38308 ChimerSeq STARFusion TCGA_RNA-Seq XPO7-NBN XPO7 chr8 21777299 + NBN chr8 90983518 - Exonic hg19 OV TCGA-57-1585-01A 17 1 Out-of-frame Intra-chr p21.3 q21.3 Oncogene Tumor suppressor gene Seq+ 38309 ChimerSeq STARFusion TCGA_RNA-Seq FMNL1-NMT1 FMNL1 chr17 43299620 + NMT1 chr17 43159012 + Exonic hg19 OV TCGA-57-1585-01A 16 2 Out-of-frame Intra-chr q21.31 q21.31 Seq+ 38310 ChimerSeq STARFusion TCGA_RNA-Seq AFAP1-EVC2 AFAP1 chr4 7941383 - EVC2 chr4 5570367 - Exonic hg19 OV TCGA-57-1585-01A 15 3 5'UTR-CDS Intra-chr p16.1 p16.2 Seq+ 38311 ChimerSeq STARFusion TCGA_RNA-Seq CAMK1D-PROSER2 CAMK1D chr10 12595355 + PROSER2 chr10 11893996 + Exonic hg19 OV TCGA-57-1585-01A 15 3 Out-of-frame Intra-chr p13 p14 Seq+ 38312 ChimerSeq STARFusion TCGA_RNA-Seq MLF2-LPCAT3 MLF2 chr12 6861451 - LPCAT3 chr12 7086424 - Exonic hg19 OV TCGA-57-1585-01A 15 1 Out-of-frame Intra-chr p13.31 p13.31 Seq+ 38313 ChimerSeq STARFusion TCGA_RNA-Seq GATSL2-UPP2 GATSL2 chr7 74867229 - UPP2 chr2 158991260 + Exonic hg19 OV TCGA-57-1585-01A 15 0 Out-of-frame Inter-chr q24.1 38314 ChimerSeq STARFusion TCGA_RNA-Seq PKP4-PDE1A PKP4 chr2 159459616 + PDE1A chr2 183011879 - Exonic hg19 OV TCGA-23-2081-01A 177 55 In-Frame Intra-chr q24.1 q32.1 Seq+ 38315 ChimerSeq STARFusion TCGA_RNA-Seq ATP5C1-TAF3 ATP5C1 chr10 7830226 + TAF3 chr10 8005883 + Exonic hg19 OV TCGA-23-2081-01A 71 8 Out-of-frame Intra-chr p14 p14 Seq+ 38316 ChimerSeq STARFusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2017353 - COL1A1 chr17 48264063 - Exonic hg19 OV TCGA-23-2081-01A 52 59 Out-of-frame Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 38317 ChimerSeq STARFusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2017363 - COL1A1 chr17 48264071 - Exonic hg19 OV TCGA-23-2081-01A 28 56 Out-of-frame Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 38318 ChimerSeq STARFusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2017361 - COL1A1 chr17 48264064 - Exonic hg19 OV TCGA-23-2081-01A 9 56 Out-of-frame Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 38319 ChimerSeq STARFusion TCGA_RNA-Seq SPATA33-ANKRD11 SPATA33 chr16 89725180 + ANKRD11 chr16 89556969 - Exonic hg19 OV TCGA-23-2081-01A 18 3 Out-of-frame Intra-chr q24.3 q24.3 38320 ChimerSeq STARFusion TCGA_RNA-Seq COL1A1-H19 COL1A1 chr17 48264083 - H19 chr11 2017322 - Exonic hg19 OV TCGA-23-2081-01A 6 38 Out-of-frame Inter-chr q21.33 Oncogene p15.5 Tumor suppressor gene 38321 ChimerSeq STARFusion TCGA_RNA-Seq COL1A1-H19 COL1A1 chr17 48264237 - H19 chr11 2017325 - Exonic hg19 OV TCGA-23-2081-01A 3 38 Out-of-frame Inter-chr q21.33 Oncogene p15.5 Tumor suppressor gene 38322 ChimerSeq STARFusion TCGA_RNA-Seq COL1A1-H19 COL1A1 chr17 48264095 - H19 chr11 2017325 - Exonic hg19 OV TCGA-23-2081-01A 3 38 Out-of-frame Inter-chr q21.33 Oncogene p15.5 Tumor suppressor gene 38323 ChimerSeq STARFusion TCGA_RNA-Seq COL1A1-H19 COL1A1 chr17 48265475 - H19 chr11 2018252 - Exonic hg19 OV TCGA-23-2081-01A 3 38 Out-of-frame Inter-chr q21.33 Oncogene p15.5 Tumor suppressor gene 38324 ChimerSeq STARFusion TCGA_RNA-Seq COL1A1-H19 COL1A1 chr17 48270395 - H19 chr11 2018216 - Exonic hg19 OV TCGA-23-2081-01A 3 38 Out-of-frame Inter-chr q21.33 Oncogene p15.5 Tumor suppressor gene 38325 ChimerSeq STARFusion TCGA_RNA-Seq KLF13-DTX2 KLF13 chr15 31619992 + DTX2 chr7 76109738 + Exonic hg19 OV TCGA-24-1425-01A 11 6 CDS-5'UTR Inter-chr Transcription factor Seq+ 38326 ChimerSeq STARFusion TCGA_RNA-Seq ST6GALNAC1-ZMAT5 ST6GALNAC1 chr17 74639590 - ZMAT5 chr22 30138469 - Exonic hg19 OV TCGA-24-1425-01A 6 8 Out-of-frame Inter-chr q25.1 q12.2 Seq+ 38327 ChimerSeq STARFusion TCGA_RNA-Seq NUDT7-IFT57 NUDT7 chr16 77759481 + IFT57 chr3 107886711 - Exonic hg19 OV TCGA-29-1769-01A 62 1 In-Frame Inter-chr q23.1 q13.13 Seq+ 38328 ChimerSeq STARFusion TCGA_RNA-Seq VASP-PPM1N VASP chr19 46011034 + PPM1N chr19 46005275 + Exonic hg19 OV TCGA-29-1769-01A 21 1 Out-of-frame Intra-chr q13.32 q13.32 Seq+ 38329 ChimerSeq STARFusion TCGA_RNA-Seq NUDT7-IFT57 NUDT7 chr16 77756514 + IFT57 chr3 107886711 - Exonic hg19 OV TCGA-29-1769-01A 8 1 Out-of-frame Inter-chr q23.1 q13.13 Seq+ 38330 ChimerSeq STARFusion TCGA_RNA-Seq TXNRD2-GNB1L TXNRD2 chr22 19902737 - GNB1L chr22 19794280 - Exonic hg19 OV TCGA-29-1769-01A 8 1 In-Frame Intra-chr q11.21 q11.21 38331 ChimerSeq STARFusion TCGA_RNA-Seq DOK5-SLC2A1 DOK5 chr20 53092551 + SLC2A1 chr1 43408992 - Exonic hg19 OV TCGA-29-1781-01A 47 1 In-Frame Inter-chr q13.2 p34.2 Seq+ 38332 ChimerSeq STARFusion TCGA_RNA-Seq UBA3-LMOD3 UBA3 chr3 69120686 - LMOD3 chr3 69158272 - Exonic hg19 OV TCGA-29-1781-01A 36 3 Out-of-frame Intra-chr p14.1 p14.1 Seq+ 38333 ChimerSeq STARFusion TCGA_RNA-Seq TPD52L1-NKAIN2 TPD52L1 chr6 125541339 + NKAIN2 chr6 125112485 + Exonic hg19 OV TCGA-29-1781-01A 35 0 In-Frame Intra-chr q22.31 q22.31 Seq+ 38334 ChimerSeq STARFusion TCGA_RNA-Seq TEX2-POLG2 TEX2 chr17 62289934 - POLG2 chr17 62481985 - Exonic hg19 OV TCGA-29-1781-01A 28 0 In-Frame Intra-chr q23.3 q23.3 Seq+ 38335 ChimerSeq STARFusion TCGA_RNA-Seq MECOM-LRRC31 MECOM chr3 169381124 - LRRC31 chr3 169587660 - Exonic hg19 OV TCGA-29-1781-01A 22 0 5'UTR-5'UTR Intra-chr q26.2 Transcription factor q26.2 Seq+ 38336 ChimerSeq STARFusion TCGA_RNA-Seq UBA3-LMOD3 UBA3 chr3 69126949 - LMOD3 chr3 69158272 - Exonic hg19 OV TCGA-29-1781-01A 14 3 In-Frame Intra-chr p14.1 p14.1 Seq+ 38337 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-MICU1 IGH@ chr14 106539078 - MICU1 chr10 74235006 - Exonic hg19 OV TCGA-29-1781-01A 10 0 Out-of-frame Inter-chr 32.33 q22.1 38338 ChimerSeq STARFusion TCGA_RNA-Seq CDC20B-DHX29 CDC20B chr5 54468416 - DHX29 chr5 54552368 - Exonic hg19 OV TCGA-13-0893-01B 100 40 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 38339 ChimerSeq STARFusion TCGA_RNA-Seq CPNE1-RBM39 CPNE1 chr20 34246852 - RBM39 chr20 34304727 - Exonic hg19 OV TCGA-13-0893-01B 89 37 5'UTR-CDS Intra-chr q11.22 q11.22 38340 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC10-GRID1 TRAPPC10 chr21 45432441 + GRID1 chr10 87628937 - Exonic hg19 OV TCGA-13-0893-01B 57 6 Out-of-frame Inter-chr q22.3 q23.2 Seq+ 38341 ChimerSeq STARFusion TCGA_RNA-Seq PXK-RPP14 PXK chr3 58318817 + RPP14 chr3 58296036 + Exonic hg19 OV TCGA-13-0893-01B 39 11 CDS-5'UTR Intra-chr p14.3 p14.3 Seq+ 38342 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-13-0893-01B 33 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38343 ChimerSeq STARFusion TCGA_RNA-Seq TTC39C-CABLES1 TTC39C chr18 21595002 + CABLES1 chr18 20837191 + Exonic hg19 OV TCGA-13-0893-01B 26 4 Out-of-frame Intra-chr q11.2 q11.2 Tumor suppressor gene Seq+ 38344 ChimerSeq STARFusion TCGA_RNA-Seq UIMC1-LILRB1 UIMC1 chr5 176409470 - LILRB1 chr19 55142477 + Exonic hg19 OV TCGA-13-0893-01B 24 6 CDS-5'UTR Inter-chr q35.2 Tumor suppressor gene Seq+ 38345 ChimerSeq STARFusion TCGA_RNA-Seq KMT2D-LMBR1L KMT2D chr12 49439703 - LMBR1L chr12 49500828 - Exonic hg19 OV TCGA-13-0893-01B 23 5 Out-of-frame Intra-chr q13.12 Oncogene q13.12 Seq+ 38346 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-13-0893-01B 20 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38347 ChimerSeq STARFusion TCGA_RNA-Seq MKNK1-ATPAF1 MKNK1 chr1 47082383 - ATPAF1 chr1 47131036 - Exonic hg19 OV TCGA-13-0893-01B 15 11 5'UTR-5'UTR Intra-chr p33 p33 Seq+ 38348 ChimerSeq STARFusion TCGA_RNA-Seq MKNK1-EFCAB14 MKNK1 chr1 47082383 - EFCAB14 chr1 47131036 - Exonic hg19 OV TCGA-13-0893-01B 15 11 Out-of-frame Intra-chr p33 p33 Seq+ 38349 ChimerSeq STARFusion TCGA_RNA-Seq MOB3C-ATPAF1 MOB3C chr1 47082383 - ATPAF1 chr1 47131036 - Exonic hg19 OV TCGA-13-0893-01B 15 11 5'UTR-5'UTR Intra-chr p33 p33 Seq+ 38350 ChimerSeq STARFusion TCGA_RNA-Seq MOB3C-EFCAB14 MOB3C chr1 47082383 - EFCAB14 chr1 47131036 - Exonic hg19 OV TCGA-13-0893-01B 15 11 Out-of-frame Intra-chr p33 p33 Seq+ 38351 ChimerSeq STARFusion TCGA_RNA-Seq SCAPER-LINGO1 SCAPER chr15 77176153 - LINGO1 chr15 77908242 - Exonic hg19 OV TCGA-13-0893-01B 15 7 In-Frame Intra-chr q24.3 q24.3 Seq+ 38352 ChimerSeq STARFusion TCGA_RNA-Seq PSMB3-CISD3 PSMB3 chr17 36918758 + CISD3 chr17 36887573 + Exonic hg19 OV TCGA-13-0893-01B 13 4 Out-of-frame Intra-chr Seq+ 38353 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-13-0893-01B 12 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38354 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1432-JAK2 KIAA1432 chr9 5656690 + JAK2 chr9 5073698 + Exonic hg19 OV TCGA-13-0893-01B 12 0 In-Frame Intra-chr p24.1 TK:JakA Oncogene 38355 ChimerSeq STARFusion TCGA_RNA-Seq ZNF142-PRKAG3 ZNF142 chr2 219513358 - PRKAG3 chr2 219687799 - Exonic hg19 OV TCGA-13-0893-01B 8 2 CDS-3'UTR Intra-chr q35 Transcription factor q35 38356 ChimerSeq STARFusion TCGA_RNA-Seq ATF7IP2-IQCK ATF7IP2 chr16 10534319 + IQCK chr16 19775170 + Exonic hg19 OV TCGA-13-0893-01B 7 5 In-Frame Intra-chr p13.2 p12.3 Seq+ 38357 ChimerSeq STARFusion TCGA_RNA-Seq MYL9-AAR2 MYL9 chr20 35173471 + AAR2 chr20 34858455 + Exonic hg19 OV TCGA-61-2002-01A 66 21 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 38358 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-61-2002-01A 36 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38359 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-61-2002-01A 34 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38360 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-61-2002-01A 32 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38361 ChimerSeq STARFusion TCGA_RNA-Seq SMCR8-ALKBH5 SMCR8 chr17 18226347 + ALKBH5 chr17 18110129 + Exonic hg19 OV TCGA-61-2002-01A 28 5 Out-of-frame Intra-chr p11.2 Seq+ 38362 ChimerSeq STARFusion TCGA_RNA-Seq IFT43-TTLL5 IFT43 chr14 76455320 + TTLL5 chr14 76420767 + Exonic hg19 OV TCGA-23-2084-01A 33 5 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 38363 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-23-2084-01A 20 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38364 ChimerSeq STARFusion TCGA_RNA-Seq PHF17-C4orf33 PHF17 chr4 129773423 + C4orf33 chr4 130023757 + Exonic hg19 OV TCGA-23-2084-01A 17 6 CDS-5'UTR Intra-chr q28.2 38365 ChimerSeq STARFusion TCGA_RNA-Seq SPTAN1-SLC34A3 SPTAN1 chr9 131389323 + SLC34A3 chr9 140130798 + Exonic hg19 OV TCGA-23-2084-01A 16 5 Out-of-frame Intra-chr q34.11 q34.3 Seq+ 38366 ChimerSeq STARFusion TCGA_RNA-Seq DIXDC1-ARCN1 DIXDC1 chr11 111808283 + ARCN1 chr11 118463424 + Exonic hg19 OV TCGA-23-2084-01A 15 4 In-Frame Intra-chr q23.1 q23.3 Seq+ 38367 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-23-2084-01A 16 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38368 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD33B-SNHG18 ANKRD33B chr5 10564945 + SNHG18 chr5 9549102 + Exonic hg19 OV TCGA-09-0367-01A 237 74 Out-of-frame Intra-chr p15.2 p15.31 Seq+ 38369 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734942 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-09-0367-01A 55 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38370 ChimerSeq STARFusion TCGA_RNA-Seq EYA3-SPCS2P4 EYA3 chr1 28415035 - SPCS2P4 chr1 28422499 - Exonic hg19 OV TCGA-09-0367-01A 46 12 Out-of-frame Intra-chr p35.3 p35.3 Seq+ 38371 ChimerSeq STARFusion TCGA_RNA-Seq MUC16-RNASEH2B MUC16 chr19 9080451 - RNASEH2B chr13 51501543 + Exonic hg19 OV TCGA-09-0367-01A 25 10 In-Frame Inter-chr p13.2 q14.3 Seq+ 38372 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-09-0367-01A 23 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38373 ChimerSeq STARFusion TCGA_RNA-Seq RTN4RL2-CTNND1 RTN4RL2 chr11 57235563 + CTNND1 chr11 57561482 + Exonic hg19 OV TCGA-09-0367-01A 20 8 In-Frame Intra-chr q12.1 q12.1 Tumor suppressor gene Seq+ 38374 ChimerSeq STARFusion TCGA_RNA-Seq TCF20-NFAM1 TCF20 chr22 42739485 - NFAM1 chr22 42793962 - Exonic hg19 OV TCGA-09-0367-01A 15 8 5'UTR-CDS Intra-chr Transcription factor q13.2 Seq+ 38375 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-09-0367-01A 16 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38376 ChimerSeq STARFusion TCGA_RNA-Seq FAM131B-GIPC1 FAM131B chr7 143059853 - GIPC1 chr19 14603727 - Exonic hg19 OV TCGA-09-0367-01A 13 0 Out-of-frame Inter-chr q34 p13.12 38377 ChimerSeq STARFusion TCGA_RNA-Seq RAB18-ZNF669 RAB18 chr10 27793366 + ZNF669 chr1 247265415 - Exonic hg19 OV TCGA-09-0367-01A 10 9 Out-of-frame Inter-chr p12.1 q44 Transcription factor Seq+ 38378 ChimerSeq STARFusion TCGA_RNA-Seq SAMD8-C10orf11 SAMD8 chr10 76928416 + C10orf11 chr10 78316967 + Exonic hg19 OV TCGA-09-0367-01A 12 1 Out-of-frame Intra-chr q22.2 Seq+ 38379 ChimerSeq STARFusion TCGA_RNA-Seq WBP2NL-SEPT3 WBP2NL chr22 42394884 + SEPT3 chr22 42388668 + Exonic hg19 OV TCGA-09-0367-01A 5 9 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 38380 ChimerSeq STARFusion TCGA_RNA-Seq RTN4RL2-CTNND1 RTN4RL2 chr11 57235563 + CTNND1 chr11 57563049 + Exonic hg19 OV TCGA-09-0367-01A 5 8 In-Frame Intra-chr q12.1 q12.1 Tumor suppressor gene Seq+ 38381 ChimerSeq STARFusion TCGA_RNA-Seq RTN4RL2-CTNND1 RTN4RL2 chr11 57235563 + CTNND1 chr11 57558964 + Exonic hg19 OV TCGA-09-0367-01A 5 8 Out-of-frame Intra-chr q12.1 q12.1 Tumor suppressor gene Seq+ 38382 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821632 - Exonic hg19 OV TCGA-04-1362-01A 144 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38383 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-04-1362-01A 141 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38384 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-04-1362-01A 123 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38385 ChimerSeq STARFusion TCGA_RNA-Seq RAB3IL1-NRG1 RAB3IL1 chr11 61666786 - NRG1 chr8 32585467 + Exonic hg19 OV TCGA-04-1362-01A 90 31 In-Frame Inter-chr q12.3 p12 Seq+ 38386 ChimerSeq STARFusion TCGA_RNA-Seq EEA1-MPG EEA1 chr12 93285405 - MPG chr16 129424 + Exonic hg19 OV TCGA-04-1362-01A 72 23 In-Frame Inter-chr q22 Transcription factor p13.3 Seq+ 38387 ChimerSeq STARFusion TCGA_RNA-Seq RAB3IL1-NRG1 RAB3IL1 chr11 61669914 - NRG1 chr8 32585467 + Exonic hg19 OV TCGA-04-1362-01A 31 31 Out-of-frame Inter-chr q12.3 p12 Seq+ 38388 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069803 - Exonic hg19 OV TCGA-04-1362-01A 34 0 Out-of-frame Inter-chr q12.3 q32.2 38389 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-CABLES2 NCOR2 chr12 124838639 - CABLES2 chr20 60971648 - Exonic hg19 OV TCGA-04-1362-01A 28 17 Out-of-frame Inter-chr q24.31 q13.33 Seq+ 38390 ChimerSeq STARFusion TCGA_RNA-Seq LAMA5-NCOR2 LAMA5 chr20 60926760 - NCOR2 chr12 124841352 - Exonic hg19 OV TCGA-04-1362-01A 27 19 Out-of-frame Inter-chr q13.33 q24.31 Seq+ 38391 ChimerSeq STARFusion TCGA_RNA-Seq INPP5A-FRMD4A INPP5A chr10 134351675 + FRMD4A chr10 14372182 - Exonic hg19 OV TCGA-04-1362-01A 16 12 CDS-5'UTR Intra-chr q26.3 p13 Seq+ 38392 ChimerSeq STARFusion TCGA_RNA-Seq LAMA5-NCOR2 LAMA5 chr20 60926760 - NCOR2 chr12 124841349 - Exonic hg19 OV TCGA-04-1362-01A 13 19 Out-of-frame Inter-chr q13.33 q24.31 Seq+ 38393 ChimerSeq STARFusion TCGA_RNA-Seq FRMD4A-TMEM45B FRMD4A chr10 14372057 - TMEM45B chr11 129722370 + Exonic hg19 OV TCGA-04-1362-01A 13 8 CDS-5'UTR Inter-chr p13 q24.3 Seq+ 38394 ChimerSeq STARFusion TCGA_RNA-Seq WDR82-ARHGAP39 WDR82 chr3 52312217 - ARHGAP39 chr8 145759586 - Exonic hg19 OV TCGA-13-0768-01A 45 5 Out-of-frame Inter-chr p21.2 q24.3 Seq+ 38395 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-MCHR1 MKL1 chr22 40990678 - MCHR1 chr22 41075221 + Exonic hg19 OV TCGA-13-0768-01A 32 14 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 38396 ChimerSeq STARFusion TCGA_RNA-Seq FNBP4-NUP160 FNBP4 chr11 47765505 - NUP160 chr11 47801999 - Exonic hg19 OV TCGA-13-0768-01A 19 10 Out-of-frame Intra-chr p11.2 p11.2 38397 ChimerSeq STARFusion TCGA_RNA-Seq CHERP-CPAMD8 CHERP chr19 16652681 - CPAMD8 chr19 17017927 - Exonic hg19 OV TCGA-13-0768-01A 12 4 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 38398 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K10-DMKN MAP3K10 chr19 40718756 + DMKN chr19 36002431 - Exonic hg19 OV TCGA-13-0768-01A 13 0 Out-of-frame Intra-chr q13.2 q13.12 38399 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-MCHR1 MKL1 chr22 40990678 - MCHR1 chr22 41076953 + Exonic hg19 OV TCGA-13-0768-01A 9 13 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 38400 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-MCHR1 MKL1 chr22 40990678 - MCHR1 chr22 41075330 + Exonic hg19 OV TCGA-13-0768-01A 7 13 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 38401 ChimerSeq STARFusion TCGA_RNA-Seq LINC00662-ZNF565 LINC00662 chr19 28283908 - ZNF565 chr19 36674635 - Exonic hg19 OV TCGA-13-0768-01A 8 3 Out-of-frame Intra-chr q11 q13.12 Transcription factor 38402 ChimerSeq STARFusion TCGA_RNA-Seq ADSL-MKL1 ADSL chr22 40750331 + MKL1 chr22 40807911 - Exonic hg19 OV TCGA-13-0768-01A 7 4 Out-of-frame Intra-chr q13.1 q13.2 Seq+ 38403 ChimerSeq STARFusion TCGA_RNA-Seq ZNF799-WDR83OS ZNF799 chr19 12511882 - WDR83OS chr19 12781111 - Exonic hg19 OV TCGA-13-0768-01A 7 2 CDS-5'UTR Intra-chr p13.2 Transcription factor p13.13 Seq+ 38404 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-MCHR1 MKL1 chr22 40990678 - MCHR1 chr22 41075447 + Exonic hg19 OV TCGA-13-0768-01A 4 13 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 38405 ChimerSeq STARFusion TCGA_RNA-Seq MECOM-LRRC34 MECOM chr3 169381124 - LRRC34 chr3 169526533 - Exonic hg19 OV TCGA-13-0768-01A 6 4 In-Frame Intra-chr q26.2 Transcription factor q26.2 Seq+ 38406 ChimerSeq STARFusion TCGA_RNA-Seq RPL37-MTRNR2L8 RPL37 chr5 40834352 - MTRNR2L8 chr11 10530513 - Exonic hg19 OV TCGA-13-0768-01A 6 4 Out-of-frame Inter-chr p13.1 p15.4 38407 ChimerSeq STARFusion TCGA_RNA-Seq ELMSAN1-MKL1 ELMSAN1 chr14 74253805 - MKL1 chr22 40807911 - Exonic hg19 OV TCGA-13-0768-01A 4 5 Out-of-frame Inter-chr q24.3 q13.2 Seq+ 38408 ChimerSeq STARFusion TCGA_RNA-Seq FNBP4-NUP160 FNBP4 chr11 47767608 - NUP160 chr11 47801999 - Exonic hg19 OV TCGA-13-0768-01A 2 10 In-Frame Intra-chr p11.2 p11.2 38409 ChimerSeq STARFusion TCGA_RNA-Seq SLC44A4-TNXA SLC44A4 chr6 31836932 - TNXA chr6 31977404 - Exonic hg19 OV TCGA-24-1470-01A 840 375 CDS-3'UTR Intra-chr 38410 ChimerSeq STARFusion TCGA_RNA-Seq SLC44A4-TNXA SLC44A4 chr6 31836932 - TNXA chr6 32010139 - Exonic hg19 OV TCGA-24-1470-01A 304 375 CDS-5'UTR Intra-chr 38411 ChimerSeq STARFusion TCGA_RNA-Seq C6orf106-SPDEF C6orf106 chr6 34614378 - SPDEF chr6 34508958 - Exonic hg19 OV TCGA-24-1470-01A 199 58 In-Frame Intra-chr p21.31 p21.31 Transcription factor 38412 ChimerSeq STARFusion TCGA_RNA-Seq ZFR-SND1 ZFR chr5 32444335 - SND1 chr7 127527955 + Exonic hg19 OV TCGA-24-1470-01A 109 22 In-Frame Inter-chr p13.3 q32.1 Seq+ 38413 ChimerSeq STARFusion TCGA_RNA-Seq SETD8-RILPL2 SETD8 chr12 123880979 + RILPL2 chr12 123915206 - Exonic hg19 OV TCGA-24-1470-01A 89 27 In-Frame Intra-chr q24.31 Seq+ 38414 ChimerSeq STARFusion TCGA_RNA-Seq EHBP1L1-POLA2 EHBP1L1 chr11 65343877 + POLA2 chr11 65061624 + Exonic hg19 OV TCGA-24-1470-01A 84 39 In-Frame Intra-chr q13.1 q13.1 Seq+ 38415 ChimerSeq STARFusion TCGA_RNA-Seq THOC5-NIPSNAP1 THOC5 chr22 29949660 - NIPSNAP1 chr22 29957851 - Exonic hg19 OV TCGA-24-1470-01A 82 28 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 38416 ChimerSeq STARFusion TCGA_RNA-Seq THOC5-NIPSNAP1 THOC5 chr22 29949437 - NIPSNAP1 chr22 29957851 - Exonic hg19 OV TCGA-24-1470-01A 43 28 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 38417 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5P1-ZNF747 SLC7A5P1 chr16 29624424 - ZNF747 chr16 30537372 - Exonic hg19 OV TCGA-24-1470-01A 27 8 3'UTR-3'UTR Intra-chr p11.2 p11.2 Transcription factor 38418 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5P1-ZNF768 SLC7A5P1 chr16 29624424 - ZNF768 chr16 30537372 - Exonic hg19 OV TCGA-24-1470-01A 27 8 3'UTR-CDS Intra-chr p11.2 p11.2 Transcription factor 38419 ChimerSeq STARFusion TCGA_RNA-Seq SLC5A1-DEPDC5 SLC5A1 chr22 32487749 + DEPDC5 chr22 32266576 + Exonic hg19 OV TCGA-24-1470-01A 19 3 Out-of-frame Intra-chr q12.3 q12.2 Seq+ 38420 ChimerSeq STARFusion TCGA_RNA-Seq FNIP1-ACSL6 FNIP1 chr5 131034610 - ACSL6 chr5 131329944 - Exonic hg19 OV TCGA-24-1470-01A 16 6 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 38421 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-1470-01A 16 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38422 ChimerSeq STARFusion TCGA_RNA-Seq THOC5-NIPSNAP1 THOC5 chr22 29949660 - NIPSNAP1 chr22 29960360 - Exonic hg19 OV TCGA-24-1470-01A 9 28 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 38423 ChimerSeq STARFusion TCGA_RNA-Seq RB1-TRIM13 RB1 chr13 48939107 + TRIM13 chr13 50592506 + Exonic hg19 OV TCGA-24-1470-01A 12 9 CDS-3'UTR Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Tumor suppressor gene Seq+ 38424 ChimerSeq STARFusion TCGA_RNA-Seq RB1-KCNRG RB1 chr13 48939107 + KCNRG chr13 50592506 + Exonic hg19 OV TCGA-24-1470-01A 8 9 Out-of-frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Tumor suppressor gene Seq+ 38425 ChimerSeq STARFusion TCGA_RNA-Seq RB1-KCNRG RB1 chr13 48939107 + KCNRG chr13 50594350 + Exonic hg19 OV TCGA-24-1470-01A 8 9 Out-of-frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Tumor suppressor gene Seq+ 38426 ChimerSeq STARFusion TCGA_RNA-Seq RB1-KCNRG RB1 chr13 48939107 + KCNRG chr13 50592959 + Exonic hg19 OV TCGA-24-1470-01A 8 9 Out-of-frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Tumor suppressor gene Seq+ 38427 ChimerSeq STARFusion TCGA_RNA-Seq RB1-TRIM13 RB1 chr13 48939107 + TRIM13 chr13 50594350 + Exonic hg19 OV TCGA-24-1470-01A 8 9 CDS-3'UTR Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Tumor suppressor gene Seq+ 38428 ChimerSeq STARFusion TCGA_RNA-Seq RB1-KCNRG RB1 chr13 48939107 + KCNRG chr13 50590110 + Exonic hg19 OV TCGA-24-1470-01A 6 9 In-Frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Tumor suppressor gene Seq+ 38429 ChimerSeq STARFusion TCGA_RNA-Seq RB1-TRIM13 RB1 chr13 48939107 + TRIM13 chr13 50590110 + Exonic hg19 OV TCGA-24-1470-01A 6 9 CDS-3'UTR Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Tumor suppressor gene Seq+ 38430 ChimerSeq STARFusion TCGA_RNA-Seq RB1-TRIM13 RB1 chr13 48939107 + TRIM13 chr13 50592959 + Exonic hg19 OV TCGA-24-1470-01A 3 9 CDS-3'UTR Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Tumor suppressor gene Seq+ 38431 ChimerSeq STARFusion TCGA_RNA-Seq STRIP1-CSF1 STRIP1 chr1 110585892 + CSF1 chr1 110471937 + Exonic hg19 OV TCGA-24-1470-01A 3 9 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 38432 ChimerSeq STARFusion TCGA_RNA-Seq STRIP1-CSF1 STRIP1 chr1 110585892 + CSF1 chr1 110472203 + Exonic hg19 OV TCGA-24-1470-01A 3 9 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 38433 ChimerSeq STARFusion TCGA_RNA-Seq SPON1-LINC00284 SPON1 chr11 14004500 + LINC00284 chr13 44482820 + Exonic hg19 OV TCGA-61-2113-01A 78 18 CDS-5'UTR Inter-chr p15.2 q14.11 38434 ChimerSeq STARFusion TCGA_RNA-Seq SRFBP1-ZNF474 SRFBP1 chr5 121297763 + ZNF474 chr5 121465191 + Exonic hg19 OV TCGA-61-2113-01A 15 3 CDS-5'UTR Intra-chr q23.1 q23.2 Transcription factor 38435 ChimerSeq STARFusion TCGA_RNA-Seq SPON1-LINC00284 SPON1 chr11 14004500 + LINC00284 chr13 44481151 + Exonic hg19 OV TCGA-61-2113-01A 10 18 CDS-5'UTR Inter-chr p15.2 q14.11 38436 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734942 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-61-2113-01A 11 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38437 ChimerSeq STARFusion TCGA_RNA-Seq KIF13A-PPP1R10 KIF13A chr6 17987285 - PPP1R10 chr6 30586405 - Exonic hg19 OV TCGA-61-2113-01A 11 0 CDS-5'UTR Intra-chr p22.3 38438 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-MKL1 TNRC6B chr22 40574144 + MKL1 chr22 40990739 - Exonic hg19 OV TCGA-61-2113-01A 9 4 CDS-5'UTR Intra-chr q13.1 q13.2 Seq+ 38439 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-ENTHD1 TNRC6B chr22 40574144 + ENTHD1 chr22 40217118 - Exonic hg19 OV TCGA-61-2113-01A 9 2 Out-of-frame Intra-chr q13.1 q13.1 38440 ChimerSeq STARFusion TCGA_RNA-Seq NPAS3-ARHGAP5 NPAS3 chr14 33404209 + ARHGAP5 chr14 32586349 + Exonic hg19 OV TCGA-61-2113-01A 8 5 5'UTR-3'UTR Intra-chr q13.1 Transcription factor q12 Seq+ 38441 ChimerSeq STARFusion TCGA_RNA-Seq NPAS3-ARHGAP5 NPAS3 chr14 33404209 + ARHGAP5 chr14 32586346 + Exonic hg19 OV TCGA-61-2113-01A 6 5 5'UTR-CDS Intra-chr q13.1 Transcription factor q12 Seq+ 38442 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-MKL1 TNRC6B chr22 40552186 + MKL1 chr22 40990739 - Exonic hg19 OV TCGA-61-2113-01A 6 4 CDS-5'UTR Intra-chr q13.1 q13.2 Seq+ 38443 ChimerSeq STARFusion TCGA_RNA-Seq P4HB-PCYT2 P4HB chr17 79816811 - PCYT2 chr17 79864774 - Exonic hg19 OV TCGA-24-2026-01A 250 46 CDS-3'UTR Intra-chr q25.3 q25.3 Seq+ 38444 ChimerSeq STARFusion TCGA_RNA-Seq TMEM179B-SCGB1D1 TMEM179B chr11 62554999 + SCGB1D1 chr11 61959528 + Exonic hg19 OV TCGA-24-2026-01A 88 17 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 38445 ChimerSeq STARFusion TCGA_RNA-Seq MECOM-LRRC34 MECOM chr3 169381124 - LRRC34 chr3 169526533 - Exonic hg19 OV TCGA-24-2026-01A 58 5 In-Frame Intra-chr q26.2 Transcription factor q26.2 Seq+ 38446 ChimerSeq STARFusion TCGA_RNA-Seq WWP2-TANGO6 WWP2 chr16 69820983 + TANGO6 chr16 69007931 + Exonic hg19 OV TCGA-24-2026-01A 55 14 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 38447 ChimerSeq STARFusion TCGA_RNA-Seq MTMR3-NF2 MTMR3 chr22 30279348 + NF2 chr22 30067815 + Exonic hg19 OV TCGA-24-2026-01A 54 0 5'UTR-CDS Intra-chr q12.2 q12.2 Oncogene Tumor suppressor gene Seq+ 38448 ChimerSeq STARFusion TCGA_RNA-Seq CARM1-C19orf38 CARM1 chr19 10982598 + C19orf38 chr19 10959117 + Exonic hg19 OV TCGA-24-2026-01A 50 7 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 38449 ChimerSeq STARFusion TCGA_RNA-Seq EDEM2-CPNE1 EDEM2 chr20 33859808 - CPNE1 chr20 34220845 - Exonic hg19 OV TCGA-24-2026-01A 37 8 5'UTR-5'UTR Intra-chr q11.22 q11.22 38450 ChimerSeq STARFusion TCGA_RNA-Seq ZFAS1-DDX27 ZFAS1 chr20 47897107 + DDX27 chr20 47851472 + Exonic hg19 OV TCGA-24-2026-01A 35 5 Out-of-frame Intra-chr q13.13 Tumor suppressor gene q13.13 38451 ChimerSeq STARFusion TCGA_RNA-Seq PRSS23-CCDC81 PRSS23 chr11 86661541 + CCDC81 chr11 86118656 + Exonic hg19 OV TCGA-24-2026-01A 23 1 3'UTR-CDS Intra-chr q14.2 q14.2 Seq+ 38452 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD33B-ADAMTS16 ANKRD33B chr5 10564945 + ADAMTS16 chr5 5232481 + Exonic hg19 OV TCGA-24-2026-01A 21 4 In-Frame Intra-chr p15.2 p15.32 Seq+ 38453 ChimerSeq STARFusion TCGA_RNA-Seq PILRB-SLC22A20 PILRB chr7 99950746 + SLC22A20 chr11 65009461 + Exonic hg19 OV TCGA-24-2026-01A 21 2 5'UTR-5'UTR Inter-chr q22.1 q13.1 Seq+ 38454 ChimerSeq STARFusion TCGA_RNA-Seq PVRIG2P-SLC22A20 PVRIG2P chr7 99950746 + SLC22A20 chr11 65009461 + Exonic hg19 OV TCGA-24-2026-01A 21 1 Out-of-frame Inter-chr q22.1 q13.1 Seq+ 38455 ChimerSeq STARFusion TCGA_RNA-Seq UBE4B-PIK3CD UBE4B chr1 10093752 + PIK3CD chr1 9751525 + Exonic hg19 OV TCGA-24-2026-01A 18 6 CDS-5'UTR Intra-chr p36.22 Tumor suppressor gene p36.22 Oncogene Seq+ 38456 ChimerSeq STARFusion TCGA_RNA-Seq VPS37B-MPHOSPH9 VPS37B chr12 123380499 - MPHOSPH9 chr12 123665757 - Exonic hg19 OV TCGA-24-2026-01A 16 3 In-Frame Intra-chr q24.31 q24.31 Seq+ 38457 ChimerSeq STARFusion TCGA_RNA-Seq SS18-CHST9 SS18 chr18 23619253 - CHST9 chr18 24524330 - Exonic hg19 OV TCGA-24-2026-01A 12 10 In-Frame Intra-chr q11.2 q11.2 Seq+ 38458 ChimerSeq STARFusion TCGA_RNA-Seq BAGE2-CTBP2P1 BAGE2 chr21 11058161 - CTBP2P1 chrY 59001440 + Exonic hg19 OV TCGA-24-2026-01A 12 0 Out-of-frame Inter-chr p11.2 38459 ChimerSeq STARFusion TCGA_RNA-Seq CPNE1-NFS1 CPNE1 chr20 34252682 - NFS1 chr20 34257607 - Exonic hg19 OV TCGA-24-2026-01A 11 0 5'UTR-CDS Intra-chr q11.22 q11.22 38460 ChimerSeq STARFusion TCGA_RNA-Seq RBM12-NFS1 RBM12 chr20 34252682 - NFS1 chr20 34257607 - Exonic hg19 OV TCGA-24-2026-01A 11 0 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 38461 ChimerSeq STARFusion TCGA_RNA-Seq SS18-CHST9 SS18 chr18 23619253 - CHST9 chr18 24497314 - Exonic hg19 OV TCGA-24-2026-01A 8 10 In-Frame Intra-chr q11.2 q11.2 Seq+ 38462 ChimerSeq STARFusion TCGA_RNA-Seq SS18-CHST9 SS18 chr18 23619259 - CHST9 chr18 24497319 - Exonic hg19 OV TCGA-24-2026-01A 7 10 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 38463 ChimerSeq STARFusion TCGA_RNA-Seq UBE4B-PIK3CD UBE4B chr1 10093752 + PIK3CD chr1 9770482 + Exonic hg19 OV TCGA-24-2026-01A 8 6 CDS-5'UTR Intra-chr p36.22 Tumor suppressor gene p36.22 Oncogene Seq+ 38464 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-SEZ6 FAM222B chr17 27161311 - SEZ6 chr17 27306831 - Exonic hg19 OV TCGA-24-2026-01A 7 5 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 38465 ChimerSeq STARFusion TCGA_RNA-Seq LRRC41-TAL1 LRRC41 chr1 46763235 - TAL1 chr1 47695023 - Exonic hg19 OV TCGA-24-2026-01A 7 3 CDS-5'UTR Intra-chr p33 p33 Oncogene Transcription factor Seq+ 38466 ChimerSeq STARFusion TCGA_RNA-Seq PPP3R1-C1D PPP3R1 chr2 68444224 - C1D chr2 68274451 - Exonic hg19 OV TCGA-24-2026-01A 7 3 CDS-5'UTR Intra-chr p14 p14 Seq+ 38467 ChimerSeq STARFusion TCGA_RNA-Seq PCNXL3-EHBP1L1 PCNXL3 chr11 65401827 + EHBP1L1 chr11 65346549 + Exonic hg19 OV TCGA-24-2026-01A 6 4 Out-of-frame Intra-chr q13.1 38468 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-ROMO1 EPB41L1 chr20 34785963 + ROMO1 chr20 34287555 + Exonic hg19 OV TCGA-24-2026-01A 4 6 CDS-5'UTR Intra-chr q11.23 q11.22 Seq+ 38469 ChimerSeq STARFusion TCGA_RNA-Seq SF1-CST6 SF1 chr11 64545834 - CST6 chr11 65779657 + Exonic hg19 OV TCGA-13-1489-02A 119 44 Out-of-frame Intra-chr q13.1 q13.1 Tumor suppressor gene Seq+ 38470 ChimerSeq STARFusion TCGA_RNA-Seq MAMSTR-RASIP1 MAMSTR chr19 49222231 - RASIP1 chr19 49230687 - Exonic hg19 OV TCGA-13-1489-02A 111 5 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 38471 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-13-1489-02A 75 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38472 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-13-1489-02A 37 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38473 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-LSAMP ZBTB20 chr3 114866066 - LSAMP chr3 115571464 - Exonic hg19 OV TCGA-13-1489-02A 17 3 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.31 Tumor suppressor gene Seq+ 38474 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-13-1489-02A 16 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38475 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-LSAMP ZBTB20 chr3 114863660 - LSAMP chr3 115571464 - Exonic hg19 OV TCGA-13-1489-02A 9 3 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.31 Tumor suppressor gene Seq+ 38476 ChimerSeq STARFusion TCGA_RNA-Seq QRICH1-MYH4 QRICH1 chr3 49131345 - MYH4 chr17 10372653 - Exonic hg19 OV TCGA-13-1489-02A 6 5 5'UTR-5'UTR Inter-chr p21.31 p13.1 38477 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R37-CEACAM19 PPP1R37 chr19 45596785 + CEACAM19 chr19 45185839 + Exonic hg19 OV TCGA-OY-A56Q-01A 283 123 Out-of-frame Intra-chr q13.32 q13.31 Seq+ 38478 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-GNB2L1 PPP6R3 chr11 68287119 + GNB2L1 chr5 180665239 - Exonic hg19 OV TCGA-OY-A56Q-01A 63 14 5'UTR-CDS Inter-chr q13.2 Tumor suppressor gene Seq+ 38479 ChimerSeq STARFusion TCGA_RNA-Seq EMC6-CEACAM19 EMC6 chr17 3572193 + CEACAM19 chr19 45185839 + Exonic hg19 OV TCGA-30-1866-01A 151 177 Out-of-frame Inter-chr p13.2 q13.31 Seq+ 38480 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734942 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-30-1866-01A 47 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38481 ChimerSeq STARFusion TCGA_RNA-Seq YIPF2-ELP5 YIPF2 chr19 11036362 - ELP5 chr17 7160176 + Exonic hg19 OV TCGA-30-1866-01A 23 6 Out-of-frame Inter-chr p13.2 p13.1 Seq+ 38482 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-30-1866-01A 18 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38483 ChimerSeq STARFusion TCGA_RNA-Seq BAGE2-CTBP2P1 BAGE2 chr21 11058161 - CTBP2P1 chrY 59001440 + Exonic hg19 OV TCGA-30-1866-01A 11 1 Out-of-frame Inter-chr p11.2 38484 ChimerSeq STARFusion TCGA_RNA-Seq MUC16-OR7G3 MUC16 chr19 9072668 - OR7G3 chr19 9237571 - Exonic hg19 OV TCGA-30-1866-01A 10 1 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 38485 ChimerSeq STARFusion TCGA_RNA-Seq SPTLC2-ATP5S SPTLC2 chr14 78036727 - ATP5S chr14 50789229 + Exonic hg19 OV TCGA-30-1866-01A 10 1 Out-of-frame Intra-chr q24.3 q21.3 Seq+ 38486 ChimerSeq STARFusion TCGA_RNA-Seq RPH3AL-SMIM7 RPH3AL chr17 65445 - SMIM7 chr19 16758072 - Exonic hg19 OV TCGA-30-1866-01A 8 1 Out-of-frame Inter-chr p13.11 38487 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-30-1866-01A 8 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38488 ChimerSeq STARFusion TCGA_RNA-Seq APPL1-ABHD6 APPL1 chr3 57294802 + ABHD6 chr3 58279316 + Exonic hg19 OV TCGA-30-1866-01A 7 1 In-Frame Intra-chr p14.3 p14.3 Seq+ 38489 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-09-1668-01B 18 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38490 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH3-EPHX3 NOTCH3 chr19 15311599 - EPHX3 chr19 15338911 - Exonic hg19 OV TCGA-09-1668-01B 10 1 In-Frame Intra-chr p13.12 Oncogene Tumor suppressor gene p13.12 38491 ChimerSeq STARFusion TCGA_RNA-Seq SLC38A1-HDAC7 SLC38A1 chr12 46599863 - HDAC7 chr12 48196057 - Exonic hg19 OV TCGA-13-2060-01A 20 2 In-Frame Intra-chr q13.11 q13.11 Seq+ 38492 ChimerSeq STARFusion TCGA_RNA-Seq MYO9B-USE1 MYO9B chr19 17213367 + USE1 chr19 17330440 + Exonic hg19 OV TCGA-23-1107-01A 67 13 In-Frame Intra-chr p13.11 p13.11 38493 ChimerSeq STARFusion TCGA_RNA-Seq NEAT1-TIGD3 NEAT1 chr11 65204137 + TIGD3 chr11 65123264 + Exonic hg19 OV TCGA-23-1107-01A 45 20 3'UTR-5'UTR Intra-chr q13.1 q13.1 Transcription factor Seq+ 38494 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-TXN2 MYH9 chr22 36783852 - TXN2 chr22 36876884 - Exonic hg19 OV TCGA-23-1107-01A 43 10 5'UTR-5'UTR Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Seq+ 38495 ChimerSeq STARFusion TCGA_RNA-Seq PGM2L1-C1orf61 PGM2L1 chr11 74079537 - C1orf61 chr1 156384545 - Exonic hg19 OV TCGA-23-1107-01A 33 16 Out-of-frame Inter-chr q13.4 q22 Seq+ 38496 ChimerSeq STARFusion TCGA_RNA-Seq NEAT1-TIGD3 NEAT1 chr11 65205144 + TIGD3 chr11 65123220 + Exonic hg19 OV TCGA-23-1107-01A 27 20 Out-of-frame Intra-chr q13.1 q13.1 Transcription factor Seq+ 38497 ChimerSeq STARFusion TCGA_RNA-Seq FAM129B-C9orf50 FAM129B chr9 130331099 - C9orf50 chr9 132375530 - Exonic hg19 OV TCGA-23-1107-01A 21 15 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 38498 ChimerSeq STARFusion TCGA_RNA-Seq PGM2L1-C1orf61 PGM2L1 chr11 74079537 - C1orf61 chr1 156374393 - Exonic hg19 OV TCGA-23-1107-01A 17 16 In-Frame Inter-chr q13.4 q22 Seq+ 38499 ChimerSeq STARFusion TCGA_RNA-Seq FAM129B-C9orf50 FAM129B chr9 130331099 - C9orf50 chr9 132375876 - Exonic hg19 OV TCGA-23-1107-01A 16 15 In-Frame Intra-chr q34.11 q34.11 Seq+ 38500 ChimerSeq STARFusion TCGA_RNA-Seq MAST2-PSMA5 MAST2 chr1 46348067 + PSMA5 chr1 109944712 - Exonic hg19 OV TCGA-23-1107-01A 15 7 Out-of-frame Intra-chr p34.1 AGC:MAST p13.3 Seq+ 38501 ChimerSeq STARFusion TCGA_RNA-Seq GLG1-RFWD3 GLG1 chr16 74640555 - RFWD3 chr16 74678633 - Exonic hg19 OV TCGA-23-1107-01A 10 7 In-Frame Intra-chr q23.1 q23.1 38502 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPL-ACTN4 HNRNPL chr19 39340340 - ACTN4 chr19 39205109 + Exonic hg19 OV TCGA-23-1107-01A 6 11 In-Frame Intra-chr Seq+ 38503 ChimerSeq STARFusion TCGA_RNA-Seq FAM129B-C9orf50 FAM129B chr9 130331099 - C9orf50 chr9 132377926 - Exonic hg19 OV TCGA-23-1107-01A 3 15 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 38504 ChimerSeq STARFusion TCGA_RNA-Seq IMMP1L-SMARCA4 IMMP1L chr11 31454048 - SMARCA4 chr19 11141406 + Exonic hg19 OV TCGA-23-1107-01A 6 1 Out-of-frame Inter-chr p13 p13.2 Oncogene Tumor suppressor gene 38505 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-CAPN1 MALAT1 chr11 65266585 + CAPN1 chr11 64972154 + Exonic hg19 OV TCGA-23-1107-01A 6 0 5'UTR-5'UTR Intra-chr q13.1 q13.1 38506 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-CAPN1 MALAT1 chr11 65266581 + CAPN1 chr11 64972144 + Exonic hg19 OV TCGA-23-1107-01A 6 0 Out-of-frame Intra-chr q13.1 q13.1 38507 ChimerSeq STARFusion TCGA_RNA-Seq SNTB2-TANGO6 SNTB2 chr16 69221649 + TANGO6 chr16 69117388 + Exonic hg19 OV TCGA-23-1107-01A 5 1 Out-of-frame Intra-chr q22.1 38508 ChimerSeq STARFusion TCGA_RNA-Seq TMEM66-LINC00551 TMEM66 chr8 29923504 - LINC00551 chr13 107279394 + Exonic hg19 OV TCGA-23-1107-01A 4 2 Out-of-frame Inter-chr q33.3 38509 ChimerSeq STARFusion TCGA_RNA-Seq C3-GPR108 C3 chr19 6710650 - GPR108 chr19 6732166 - Exonic hg19 OV TCGA-23-1107-01A 2 3 In-Frame Intra-chr p13.3 p13.3 38510 ChimerSeq STARFusion TCGA_RNA-Seq SPG20-SOHLH2 SPG20 chr13 36920362 - SOHLH2 chr13 36776230 - Exonic hg19 OV TCGA-29-1785-01A 40 14 5'UTR-CDS Intra-chr q13.3 q13.3 Transcription factor Seq+ 38511 ChimerSeq STARFusion TCGA_RNA-Seq RHNO1-ITFG2 RHNO1 chr12 2986448 + ITFG2 chr12 2931960 + Exonic hg19 OV TCGA-29-1785-01A 31 0 Out-of-frame Intra-chr p13.33 p13.33 38512 ChimerSeq STARFusion TCGA_RNA-Seq TULP3-ITFG2 TULP3 chr12 2986448 + ITFG2 chr12 2931960 + Exonic hg19 OV TCGA-29-1785-01A 31 0 5'UTR-CDS Intra-chr p13.33 p13.33 Seq+ 38513 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-DEFB123 EPB41L1 chr20 34810316 + DEFB123 chr20 30037832 + Exonic hg19 OV TCGA-29-1785-01A 19 2 Out-of-frame Intra-chr q11.23 q11.21 Seq+ 38514 ChimerSeq STARFusion TCGA_RNA-Seq SPG20-SOHLH2 SPG20 chr13 36920719 - SOHLH2 chr13 36776230 - Exonic hg19 OV TCGA-29-1785-01A 13 14 5'UTR-CDS Intra-chr q13.3 q13.3 Transcription factor Seq+ 38515 ChimerSeq STARFusion TCGA_RNA-Seq WWP2-CYB5B WWP2 chr16 69833198 + CYB5B chr16 69481053 + Exonic hg19 OV TCGA-29-1785-01A 14 0 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 38516 ChimerSeq STARFusion TCGA_RNA-Seq SPG20-SOHLH2 SPG20 chr13 36920377 - SOHLH2 chr13 36776230 - Exonic hg19 OV TCGA-29-1785-01A 5 14 5'UTR-CDS Intra-chr q13.3 q13.3 Transcription factor Seq+ 38517 ChimerSeq STARFusion TCGA_RNA-Seq PDIA5-DIRC2 PDIA5 chr3 122821643 + DIRC2 chr3 122575154 + Exonic hg19 OV TCGA-25-1322-01A 102 29 In-Frame Intra-chr q21.1 q21.1 Seq+ 38518 ChimerSeq STARFusion TCGA_RNA-Seq GHITM-NRG3 GHITM chr10 85902510 + NRG3 chr10 84711225 + Exonic hg19 OV TCGA-25-1322-01A 67 13 In-Frame Intra-chr q23.1 q23.1 Seq+ 38519 ChimerSeq STARFusion TCGA_RNA-Seq MOB1B-MUC7 MOB1B chr4 71768267 + MUC7 chr4 71337932 + Exonic hg19 OV TCGA-25-1322-01A 65 10 5'UTR-5'UTR Intra-chr q13.3 Tumor suppressor gene q13.3 Seq+ 38520 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-25-1322-01A 28 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38521 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-25-1322-01A 26 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38522 ChimerSeq STARFusion TCGA_RNA-Seq PLIN3-BRSK1 PLIN3 chr19 4867621 - BRSK1 chr19 55812880 + Exonic hg19 OV TCGA-25-1322-01A 19 1 5'UTR-CDS Intra-chr p13.3 q13.42 CAMK:CAMKL Tumor suppressor gene Seq+ 38523 ChimerSeq STARFusion TCGA_RNA-Seq KLHL22-P2RX6P KLHL22 chr22 20843272 - P2RX6P chr22 21389725 - Exonic hg19 OV TCGA-25-1322-01A 18 2 3'UTR-3'UTR Intra-chr q11.21 q11.21 Seq+ 38524 ChimerSeq STARFusion TCGA_RNA-Seq MOB1B-MUC7 MOB1B chr4 71768267 + MUC7 chr4 71296301 + Exonic hg19 OV TCGA-25-1322-01A 16 10 5'UTR-5'UTR Intra-chr q13.3 Tumor suppressor gene q13.3 Seq+ 38525 ChimerSeq STARFusion TCGA_RNA-Seq CCDC37-BCAM CCDC37 chr3 126152026 + BCAM chr19 45322835 + Exonic hg19 OV TCGA-25-1322-01A 16 0 Out-of-frame Inter-chr q13.32 38526 ChimerSeq STARFusion TCGA_RNA-Seq ZMIZ1-LINC00856 ZMIZ1 chr10 80961449 + LINC00856 chr10 80285087 + Exonic hg19 OV TCGA-25-1322-01A 15 3 Out-of-frame Intra-chr q22.3 q22.3 38527 ChimerSeq STARFusion TCGA_RNA-Seq SDK1-RAC1 SDK1 chr7 4026954 + RAC1 chr7 6439757 + Exonic hg19 OV TCGA-25-1322-01A 7 11 Out-of-frame Intra-chr p22.2 p22.1 Oncogene 38528 ChimerSeq STARFusion TCGA_RNA-Seq MUC16-OR7G2 MUC16 chr19 9045564 - OR7G2 chr19 9213935 - Exonic hg19 OV TCGA-57-1994-01A 58 32 Out-of-frame Intra-chr p13.2 p13.2 38529 ChimerSeq STARFusion TCGA_RNA-Seq DVL3-ECE2 DVL3 chr3 183885853 + ECE2 chr3 184009850 + Exonic hg19 OV TCGA-57-1994-01A 38 9 Out-of-frame Intra-chr q27.1 q27.1 Seq+ 38530 ChimerSeq STARFusion TCGA_RNA-Seq SPINT2-TYROBP SPINT2 chr19 38755638 + TYROBP chr19 36399209 - Exonic hg19 OV TCGA-57-1994-01A 31 16 CDS-5'UTR Intra-chr q13.2 Tumor suppressor gene q13.12 Seq+ 38531 ChimerSeq STARFusion TCGA_RNA-Seq CHD7-CLVS1 CHD7 chr8 61591641 + CLVS1 chr8 62289164 + Exonic hg19 OV TCGA-57-1994-01A 12 8 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 38532 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH3-HOXD11 NOTCH3 chr19 15302859 - HOXD11 chr2 176969285 + Exonic hg19 OV TCGA-57-1994-01A 11 10 Out-of-frame Inter-chr p13.12 Oncogene Tumor suppressor gene q31.1 Transcription factor Seq+ 38533 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH3-HOXD11 NOTCH3 chr19 15308311 - HOXD11 chr2 176973635 + Exonic hg19 OV TCGA-57-1994-01A 9 10 Out-of-frame Inter-chr p13.12 Oncogene Tumor suppressor gene q31.1 Transcription factor Seq+ 38534 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH3-HOXD10 NOTCH3 chr19 15308311 - HOXD10 chr2 176973635 + Exonic hg19 OV TCGA-57-1994-01A 9 7 CDS-5'UTR Inter-chr p13.12 Oncogene Tumor suppressor gene q31.1 Transcription factor Seq+ 38535 ChimerSeq STARFusion TCGA_RNA-Seq SPINT2-TYROBP SPINT2 chr19 38755638 + TYROBP chr19 36398482 - Exonic hg19 OV TCGA-57-1994-01A 4 16 In-Frame Intra-chr q13.2 Tumor suppressor gene q13.12 Seq+ 38536 ChimerSeq STARFusion TCGA_RNA-Seq CHD7-CLVS1 CHD7 chr8 61591641 + CLVS1 chr8 62366700 + Exonic hg19 OV TCGA-57-1994-01A 4 8 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 38537 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH3-HOXD10 NOTCH3 chr19 15302861 - HOXD10 chr2 176969283 + Exonic hg19 OV TCGA-57-1994-01A 4 7 Out-of-frame Inter-chr p13.12 Oncogene Tumor suppressor gene q31.1 Transcription factor Seq+ 38538 ChimerSeq STARFusion TCGA_RNA-Seq CHD7-CLVS1 CHD7 chr8 61592350 + CLVS1 chr8 62289164 + Exonic hg19 OV TCGA-57-1994-01A 2 8 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 38539 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-CTNNB1 TBL1XR1 chr3 176914909 - CTNNB1 chr3 41274832 + Exonic hg19 OV TCGA-24-2280-01A 47 15 5'UTR-CDS Intra-chr q26.32 p22.1 Oncogene Seq+ 38540 ChimerSeq STARFusion TCGA_RNA-Seq RANGAP1-PMM1 RANGAP1 chr22 41664101 - PMM1 chr22 41974885 - Exonic hg19 OV TCGA-24-2280-01A 42 5 In-Frame Intra-chr q13.2 q13.2 Seq+ 38541 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57889031 + Exonic hg19 OV TCGA-24-2280-01A 25 9 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 38542 ChimerSeq STARFusion TCGA_RNA-Seq FNBP4-NUP160 FNBP4 chr11 47765505 - NUP160 chr11 47814498 - Exonic hg19 OV TCGA-24-2280-01A 24 2 In-Frame Intra-chr p11.2 p11.2 38543 ChimerSeq STARFusion TCGA_RNA-Seq CLSTN1-SERTAD1 CLSTN1 chr1 9883701 - SERTAD1 chr19 40929453 - Exonic hg19 OV TCGA-24-2280-01A 22 1 CDS-5'UTR Inter-chr p36.22 q13.2 Seq+ 38544 ChimerSeq STARFusion TCGA_RNA-Seq GGT7-SLA2 GGT7 chr20 33460450 - SLA2 chr20 35243777 - Exonic hg19 OV TCGA-24-2280-01A 11 0 In-Frame Intra-chr q11.22 q11.23 Seq+ 38545 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-CTNNB1 TBL1XR1 chr3 176878659 - CTNNB1 chr3 41274832 + Exonic hg19 OV TCGA-24-2280-01A 7 15 5'UTR-CDS Intra-chr q26.32 p22.1 Oncogene Seq+ 38546 ChimerSeq STARFusion TCGA_RNA-Seq HN1-ARMC7 HN1 chr17 73142761 - ARMC7 chr17 73124772 + Exonic hg19 OV TCGA-24-2280-01A 7 2 In-Frame Intra-chr q25.1 Seq+ 38547 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA3-OSBPL6 PLEKHA3 chr2 179345636 + OSBPL6 chr2 179236853 + Exonic hg19 OV TCGA-13-0913-01A 67 27 Out-of-frame Intra-chr q31.2 q31.2 Seq+ 38548 ChimerSeq STARFusion TCGA_RNA-Seq KPNA6-C6orf48 KPNA6 chr1 32573735 + C6orf48 chr6 31803188 + Exonic hg19 OV TCGA-13-0913-01A 61 18 CDS-5'UTR Inter-chr p35.2 Seq+ 38549 ChimerSeq STARFusion TCGA_RNA-Seq RABL6-TMEM141 RABL6 chr9 139702778 + TMEM141 chr9 139686703 + Exonic hg19 OV TCGA-13-0913-01A 36 24 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 38550 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA3-OSBPL6 PLEKHA3 chr2 179345636 + OSBPL6 chr2 179238617 + Exonic hg19 OV TCGA-13-0913-01A 30 23 Out-of-frame Intra-chr q31.2 q31.2 Seq+ 38551 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142481912 + KLK5 chr19 51447042 - Exonic hg19 OV TCGA-13-0913-01A 33 0 3'UTR-CDS Inter-chr q13.41 38552 ChimerSeq STARFusion TCGA_RNA-Seq CPSF1-ARHGAP39 CPSF1 chr8 145634399 - ARHGAP39 chr8 145781027 - Exonic hg19 OV TCGA-13-0913-01A 31 5 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 38553 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142471340 + KLK5 chr19 51447042 - Exonic hg19 OV TCGA-13-0913-01A 32 0 3'UTR-CDS Inter-chr q13.41 38554 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142460418 + KLK5 chr19 51447042 - Exonic hg19 OV TCGA-13-0913-01A 32 0 In-Frame Inter-chr q13.41 38555 ChimerSeq STARFusion TCGA_RNA-Seq RABL6-TMEM141 RABL6 chr9 139702778 + TMEM141 chr9 139686399 + Exonic hg19 OV TCGA-13-0913-01A 14 24 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 38556 ChimerSeq STARFusion TCGA_RNA-Seq OAZ1-ONECUT3 OAZ1 chr19 2269743 + ONECUT3 chr19 1776268 + Exonic hg19 OV TCGA-24-2020-01A 180 30 CDS-3'UTR Intra-chr p13.3 p13.3 Transcription factor Seq+ 38557 ChimerSeq STARFusion TCGA_RNA-Seq TNPO2-PRDX2 TNPO2 chr19 12826253 - PRDX2 chr19 12910689 - Exonic hg19 OV TCGA-24-2020-01A 143 42 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 38558 ChimerSeq STARFusion TCGA_RNA-Seq RRBP1-YWHAE RRBP1 chr20 17660644 - YWHAE chr17 1268352 - Exonic hg19 OV TCGA-24-2020-01A 137 43 5'UTR-CDS Inter-chr p12.1 p13.3 Seq+ 38559 ChimerSeq STARFusion TCGA_RNA-Seq RRBP1-YWHAE RRBP1 chr20 17662673 - YWHAE chr17 1268352 - Exonic hg19 OV TCGA-24-2020-01A 72 34 5'UTR-CDS Inter-chr p12.1 p13.3 Seq+ 38560 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142481912 + KLK5 chr19 51447042 - Exonic hg19 OV TCGA-24-2020-01A 76 0 3'UTR-CDS Inter-chr q13.41 38561 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142460418 + KLK5 chr19 51447042 - Exonic hg19 OV TCGA-24-2020-01A 76 0 In-Frame Inter-chr q13.41 38562 ChimerSeq STARFusion TCGA_RNA-Seq KLF6-CREM KLF6 chr10 3827105 - CREM chr10 35437296 + Exonic hg19 OV TCGA-24-2020-01A 70 18 Out-of-frame Intra-chr p15.2 Oncogene Tumor suppressor gene Transcription factor p11.21 Tumor suppressor gene Transcription factor Seq+ 38563 ChimerSeq STARFusion TCGA_RNA-Seq RRBP1-YWHAE RRBP1 chr20 17660644 - YWHAE chr17 1273035 - Exonic hg19 OV TCGA-24-2020-01A 32 41 5'UTR-3'UTR Inter-chr p12.1 p13.3 Seq+ 38564 ChimerSeq STARFusion TCGA_RNA-Seq RRBP1-YWHAE RRBP1 chr20 17660640 - YWHAE chr17 1268352 - Exonic hg19 OV TCGA-24-2020-01A 17 41 5'UTR-CDS Inter-chr p12.1 p13.3 Seq+ 38565 ChimerSeq STARFusion TCGA_RNA-Seq NCOA3-EYA2 NCOA3 chr20 46130763 + EYA2 chr20 45771698 + Exonic hg19 OV TCGA-24-2020-01A 23 7 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.12 Seq+ 38566 ChimerSeq STARFusion TCGA_RNA-Seq CTBP2-KCNMA1 CTBP2 chr10 126848888 - KCNMA1 chr10 79011014 - Exonic hg19 OV TCGA-24-2020-01A 14 3 5'UTR-CDS Intra-chr q26.13 q22.3 Seq+ 38567 ChimerSeq STARFusion TCGA_RNA-Seq SNTB1-FGGY SNTB1 chr8 121823513 - FGGY chr1 60019796 + Exonic hg19 OV TCGA-24-2020-01A 14 2 In-Frame Inter-chr q24.12 p32.1 Seq+ 38568 ChimerSeq STARFusion TCGA_RNA-Seq CCDC30-YBX1 CCDC30 chr1 42929569 + YBX1 chr1 43159161 + Exonic hg19 OV TCGA-24-2020-01A 13 0 5'UTR-CDS Intra-chr p34.2 p34.2 Transcription factor 38569 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142471340 + KLK5 chr19 51447042 - Exonic hg19 OV TCGA-24-2020-01A 12 0 3'UTR-CDS Inter-chr q13.41 38570 ChimerSeq STARFusion TCGA_RNA-Seq CCNY-ADARB2 CCNY chr10 35626135 + ADARB2 chr10 1421355 - Exonic hg19 OV TCGA-24-2020-01A 9 4 In-Frame Intra-chr p11.21 p15.3 Seq+ 38571 ChimerSeq STARFusion TCGA_RNA-Seq RRBP1-BFSP1 RRBP1 chr20 17660644 - BFSP1 chr20 17541223 - Exonic hg19 OV TCGA-24-2020-01A 7 10 5'UTR-5'UTR Intra-chr p12.1 p12.1 Seq+ 38572 ChimerSeq STARFusion TCGA_RNA-Seq RRBP1-BFSP1 RRBP1 chr20 17660644 - BFSP1 chr20 17505553 - Exonic hg19 OV TCGA-24-2020-01A 6 10 5'UTR-CDS Intra-chr p12.1 p12.1 Seq+ 38573 ChimerSeq STARFusion TCGA_RNA-Seq RRBP1-BFSP1 RRBP1 chr20 17662673 - BFSP1 chr20 17543740 - Exonic hg19 OV TCGA-24-2020-01A 5 10 5'UTR-5'UTR Intra-chr p12.1 p12.1 Seq+ 38574 ChimerSeq STARFusion TCGA_RNA-Seq RRBP1-BFSP1 RRBP1 chr20 17660644 - BFSP1 chr20 17543740 - Exonic hg19 OV TCGA-24-2020-01A 4 10 5'UTR-5'UTR Intra-chr p12.1 p12.1 Seq+ 38575 ChimerSeq STARFusion TCGA_RNA-Seq RRBP1-BFSP1 RRBP1 chr20 17662673 - BFSP1 chr20 17505553 - Exonic hg19 OV TCGA-24-2020-01A 4 10 5'UTR-CDS Intra-chr p12.1 p12.1 Seq+ 38576 ChimerSeq STARFusion TCGA_RNA-Seq RRBP1-BFSP1 RRBP1 chr20 17660644 - BFSP1 chr20 17541428 - Exonic hg19 OV TCGA-24-2020-01A 3 10 5'UTR-5'UTR Intra-chr p12.1 p12.1 Seq+ 38577 ChimerSeq STARFusion TCGA_RNA-Seq CCDC148-GCG CCDC148 chr2 159312927 - GCG chr2 163005697 - Exonic hg19 OV TCGA-24-1417-01A 17 9 5'UTR-5'UTR Intra-chr q24.1 q24.2 Seq+ 38578 ChimerSeq STARFusion TCGA_RNA-Seq KLHDC10-SND1 KLHDC10 chr7 129769416 + SND1 chr7 127447538 + Exonic hg19 OV TCGA-24-1417-01A 17 4 In-Frame Intra-chr q32.2 q32.1 Seq+ 38579 ChimerSeq STARFusion TCGA_RNA-Seq ZNF578-SIGLEC20P ZNF578 chr19 52960211 + SIGLEC20P chr19 51688219 + Exonic hg19 OV TCGA-24-1417-01A 10 24 Out-of-frame Intra-chr q13.41 Transcription factor q13.41 Seq+ 38580 ChimerSeq STARFusion TCGA_RNA-Seq NAP1L4-CFTR NAP1L4 chr11 2972489 - CFTR chr7 117227793 + Exonic hg19 OV TCGA-24-1417-01A 10 10 In-Frame Inter-chr q31.2 Tumor suppressor gene Seq+ 38581 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821632 - Exonic hg19 OV TCGA-24-1417-01A 11 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38582 ChimerSeq STARFusion TCGA_RNA-Seq GANAB-LRRN4CL GANAB chr11 62397973 - LRRN4CL chr11 62454974 - Exonic hg19 OV TCGA-24-1417-01A 8 4 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q12.3 38583 ChimerSeq STARFusion TCGA_RNA-Seq MFSD6-PMS1 MFSD6 chr2 191334581 + PMS1 chr2 190738222 + Exonic hg19 OV TCGA-24-1417-01A 5 5 In-Frame Intra-chr q32.2 q32.2 Oncogene Seq+ 38584 ChimerSeq STARFusion TCGA_RNA-Seq SRGAP3-ATP2B2 SRGAP3 chr3 9290569 - ATP2B2 chr3 10575817 - Exonic hg19 OV TCGA-24-1417-01A 5 5 CDS-5'UTR Intra-chr p25.3 Tumor suppressor gene p25.3 Seq+ 38585 ChimerSeq STARFusion TCGA_RNA-Seq CCDC148-GCG CCDC148 chr2 159312927 - GCG chr2 163004024 - Exonic hg19 OV TCGA-24-1417-01A 2 9 Out-of-frame Intra-chr q24.1 q24.2 Seq+ 38586 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734942 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-61-1721-01A 12 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38587 ChimerSeq STARFusion TCGA_RNA-Seq RPL13P12-PNMA2 RPL13P12 chr17 17286669 - PNMA2 chr8 26364477 - Exonic hg19 OV TCGA-61-1721-01A 10 0 Out-of-frame Inter-chr p21.2 38588 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-61-1721-01A 8 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38589 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-TMEM185A WIPF2 chr17 38375658 + TMEM185A chrX 148713423 - Exonic hg19 OV TCGA-61-1721-01A 8 0 Out-of-frame Inter-chr q21.2 q28 38590 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-23-1027-01A 27 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38591 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069803 - Exonic hg19 OV TCGA-23-1027-01A 21 0 Out-of-frame Inter-chr q12.3 q32.2 38592 ChimerSeq STARFusion TCGA_RNA-Seq WNK1-EIF3G WNK1 chr12 939326 + EIF3G chr19 10230655 - Exonic hg19 OV TCGA-09-2044-01B 135 32 CDS-5'UTR Inter-chr p13.33 p13.2 Seq+ 38593 ChimerSeq STARFusion TCGA_RNA-Seq SPICE1-MORC1 SPICE1 chr3 113207792 - MORC1 chr3 108690249 - Exonic hg19 OV TCGA-09-2044-01B 71 13 In-Frame Intra-chr q13.2 q13.13 Seq+ 38594 ChimerSeq STARFusion TCGA_RNA-Seq KPNA6-TMEM39B KPNA6 chr1 32573735 + TMEM39B chr1 32540552 + Exonic hg19 OV TCGA-09-2044-01B 53 7 In-Frame Intra-chr p35.2 p35.2 Seq+ 38595 ChimerSeq STARFusion TCGA_RNA-Seq POMT1-PRRC2B POMT1 chr9 134378460 + PRRC2B chr9 134374784 + Exonic hg19 OV TCGA-09-2044-01B 49 4 5'UTR-3'UTR Intra-chr q34.13 q34.13 38596 ChimerSeq STARFusion TCGA_RNA-Seq DEDD2-PAFAH1B3 DEDD2 chr19 42719285 - PAFAH1B3 chr19 42801517 - Exonic hg19 OV TCGA-09-2044-01B 46 4 Out-of-frame Intra-chr q13.2 q13.2 38597 ChimerSeq STARFusion TCGA_RNA-Seq WNK1-EIF3G WNK1 chr12 939326 + EIF3G chr19 10230376 - Exonic hg19 OV TCGA-09-2044-01B 18 32 Out-of-frame Inter-chr p13.33 p13.2 Seq+ 38598 ChimerSeq STARFusion TCGA_RNA-Seq SUMO3-FAM83E SUMO3 chr21 46233891 - FAM83E chr19 49107168 - Exonic hg19 OV TCGA-09-2044-01B 22 3 Out-of-frame Inter-chr q22.3 q13.33 Seq+ 38599 ChimerSeq STARFusion TCGA_RNA-Seq E2F6-STK36 E2F6 chr2 11597305 - STK36 chr2 219543891 + Exonic hg19 OV TCGA-09-2044-01B 20 8 Out-of-frame Intra-chr p25.1 Transcription factor q35 Oncogene Seq+ 38600 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-09-2044-01B 16 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38601 ChimerSeq STARFusion TCGA_RNA-Seq THOC5-ASCC2 THOC5 chr22 29939418 - ASCC2 chr22 30212062 - Exonic hg19 OV TCGA-09-2044-01B 16 0 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 38602 ChimerSeq STARFusion TCGA_RNA-Seq E2F6-STK36 E2F6 chr2 11597305 - STK36 chr2 219544283 + Exonic hg19 OV TCGA-09-2044-01B 14 5 In-Frame Intra-chr p25.1 Transcription factor q35 Oncogene Seq+ 38603 ChimerSeq STARFusion TCGA_RNA-Seq E2F6-STK36 E2F6 chr2 11605898 - STK36 chr2 219545326 + Exonic hg19 OV TCGA-09-2044-01B 13 8 Out-of-frame Intra-chr p25.1 Transcription factor q35 Oncogene Seq+ 38604 ChimerSeq STARFusion TCGA_RNA-Seq PANK4-TTC34 PANK4 chr1 2451761 - TTC34 chr1 2577002 - Exonic hg19 OV TCGA-09-2044-01B 14 2 In-Frame Intra-chr p36.32 Seq+ 38605 ChimerSeq STARFusion TCGA_RNA-Seq PPFIBP2-SYT9 PPFIBP2 chr11 7655783 + SYT9 chr11 7437273 + Exonic hg19 OV TCGA-09-2044-01B 13 2 In-Frame Intra-chr p15.4 p15.4 38606 ChimerSeq STARFusion TCGA_RNA-Seq E2F6-STK36 E2F6 chr2 11605898 - STK36 chr2 219544283 + Exonic hg19 OV TCGA-09-2044-01B 7 8 Out-of-frame Intra-chr p25.1 Transcription factor q35 Oncogene Seq+ 38607 ChimerSeq STARFusion TCGA_RNA-Seq QKI-MRPL14 QKI chr6 163899928 + MRPL14 chr6 44084366 - Exonic hg19 OV TCGA-13-0897-01A 30 4 CDS-5'UTR Intra-chr q26 p21.1 Seq+ 38608 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-13-0897-01A 27 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38609 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-13-0897-01A 22 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38610 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734942 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-13-0897-01A 15 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38611 ChimerSeq STARFusion TCGA_RNA-Seq SMURF2-LRRC37A3 SMURF2 chr17 62574610 - LRRC37A3 chr17 62882284 - Exonic hg19 OV TCGA-13-0897-01A 14 3 In-Frame Intra-chr q24.1 q24.1 Seq+ 38612 ChimerSeq STARFusion TCGA_RNA-Seq AMPD2-STXBP3 AMPD2 chr1 110162900 + STXBP3 chr1 109338856 + Exonic hg19 OV TCGA-13-0897-01A 10 2 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 38613 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469662 + FTH1P27 chrX 37364954 + Exonic hg19 OV TCGA-13-0897-01A 8 0 Out-of-frame Inter-chr q13.33 p21.1 38614 ChimerSeq STARFusion TCGA_RNA-Seq SMURF2-LRRC37A3 SMURF2 chr17 62574610 - LRRC37A3 chr17 62865284 - Exonic hg19 OV TCGA-13-0897-01A 5 3 In-Frame Intra-chr q24.1 q24.1 Seq+ 38615 ChimerSeq STARFusion TCGA_RNA-Seq GCN1L1-RPLP0 GCN1L1 chr12 120611457 - RPLP0 chr12 120635265 - Exonic hg19 OV TCGA-24-1418-01A 346 239 Out-of-frame Intra-chr q24.23 Seq+ 38616 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-24-1418-01A 23 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38617 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-24-1418-01A 22 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38618 ChimerSeq STARFusion TCGA_RNA-Seq WWC1-RARS WWC1 chr5 167719276 + RARS chr5 167927596 + Exonic hg19 OV TCGA-24-1418-01A 7 4 Out-of-frame Intra-chr q34 q34 Seq+ 38619 ChimerSeq STARFusion TCGA_RNA-Seq USP22-CCDC144NL USP22 chr17 20931855 - CCDC144NL chr17 20770016 - Exonic hg19 OV TCGA-24-1418-01A 7 2 In-Frame Intra-chr p11.2 p11.2 Seq+ 38620 ChimerSeq STARFusion TCGA_RNA-Seq UBE2H-ZC3HC1 UBE2H chr7 129592343 - ZC3HC1 chr7 129680925 - Exonic hg19 OV TCGA-61-1743-01A 62 12 Out-of-frame Intra-chr q32.2 q32.2 Seq+ 38621 ChimerSeq STARFusion TCGA_RNA-Seq RASGRP1-TBC1D3 RASGRP1 chr15 38852022 - TBC1D3 chr17 36347082 - Exonic hg19 OV TCGA-61-1743-01A 53 11 CDS-3'UTR Inter-chr q14 q12 38622 ChimerSeq STARFusion TCGA_RNA-Seq VCL-ZSWIM8 VCL chr10 75758133 + ZSWIM8 chr10 75553346 + Exonic hg19 OV TCGA-61-1743-01A 38 2 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 38623 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-YEATS4 FRS2 chr12 69964297 + YEATS4 chr12 69783927 + Exonic hg19 OV TCGA-61-1743-01A 28 5 In-Frame Intra-chr q15 q15 38624 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-61-1743-01A 27 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38625 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-61-1743-01A 23 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38626 ChimerSeq STARFusion TCGA_RNA-Seq SPEG-FLJ27365 SPEG chr2 220329330 + FLJ27365 chr22 46493806 + Exonic hg19 OV TCGA-61-1743-01A 21 4 Out-of-frame Inter-chr q35 CAMK:Trio 38627 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D10A-OSBP2 TBC1D10A chr22 30722662 - OSBP2 chr22 31266416 + Exonic hg19 OV TCGA-61-1743-01A 19 5 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 38628 ChimerSeq STARFusion TCGA_RNA-Seq RPL14P1-SRP14 RPL14P1 chr12 63359505 + SRP14 chr15 40328606 - Exonic hg19 OV TCGA-61-1743-01A 12 6 Out-of-frame Inter-chr q15.1 38629 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD17-AK2 ANKRD17 chr4 74123991 - AK2 chr1 33480193 - Exonic hg19 OV TCGA-29-1691-01A 73 59 Out-of-frame Inter-chr q13.3 p35.1 Seq+ 38630 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD17-AK2 ANKRD17 chr4 74088691 - AK2 chr1 33480195 - Exonic hg19 OV TCGA-29-1691-01A 72 30 CDS-3'UTR Inter-chr q13.3 p35.1 Seq+ 38631 ChimerSeq STARFusion TCGA_RNA-Seq ROCK2-MEIS1 ROCK2 chr2 11484122 - MEIS1 chr2 66775075 + Exonic hg19 OV TCGA-29-1691-01A 29 6 In-Frame Intra-chr p25.1 AGC:DMPK p14 Transcription factor Seq+ 38632 ChimerSeq STARFusion TCGA_RNA-Seq IPPK-IARS IPPK chr9 95396668 - IARS chr9 94973171 - Exonic hg19 OV TCGA-29-1691-01A 27 7 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 38633 ChimerSeq STARFusion TCGA_RNA-Seq NIPAL2-EBAG9 NIPAL2 chr8 99306231 - EBAG9 chr8 110576668 + Exonic hg19 OV TCGA-29-1691-01A 24 6 Out-of-frame Intra-chr q22.2 q23.2 Seq+ 38634 ChimerSeq STARFusion TCGA_RNA-Seq NUP133-PARPBP NUP133 chr1 229633883 - PARPBP chr12 102589729 + Exonic hg19 OV TCGA-29-1691-01A 24 3 Out-of-frame Inter-chr q42.13 q23.2 Seq+ 38635 ChimerSeq STARFusion TCGA_RNA-Seq ADRBK2-NOTCH2 ADRBK2 chr22 26000420 + NOTCH2 chr1 120572610 - Exonic hg19 OV TCGA-29-1691-01A 22 1 In-Frame Inter-chr p12 Oncogene Tumor suppressor gene 38636 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-29-1691-01A 22 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38637 ChimerSeq STARFusion TCGA_RNA-Seq DSP-FARS2 DSP chr6 7542318 + FARS2 chr6 5545413 + Exonic hg19 OV TCGA-29-1691-01A 20 4 Out-of-frame Intra-chr p24.3 Tumor suppressor gene p25.1 Seq+ 38638 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-29-1691-01A 17 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38639 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-29-1691-01A 14 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38640 ChimerSeq STARFusion TCGA_RNA-Seq DDAH2-MSH5 DDAH2 chr6 31697828 - MSH5 chr6 31725942 + Exonic hg19 OV TCGA-29-1691-01A 8 3 5'UTR-CDS Intra-chr Seq+ 38641 ChimerSeq STARFusion TCGA_RNA-Seq DLG1-PAK2 DLG1 chr3 197009550 - PAK2 chr3 196534653 + Exonic hg19 OV TCGA-25-1328-01A 28 8 In-Frame Intra-chr q29 Tumor suppressor gene q29 STE:STE20 Seq+ 38642 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-25-1328-01A 21 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38643 ChimerSeq STARFusion TCGA_RNA-Seq PAK2-DLG1 PAK2 chr3 196532254 + DLG1 chr3 196876667 - Exonic hg19 OV TCGA-25-1328-01A 8 8 In-Frame Intra-chr q29 STE:STE20 q29 Tumor suppressor gene Seq+ 38644 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-25-1328-01A 9 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38645 ChimerSeq STARFusion TCGA_RNA-Seq RPS6-MTATP8P1 RPS6 chr9 19379526 - MTATP8P1 chr1 568942 + Exonic hg19 OV TCGA-25-1328-01A 6 3 Out-of-frame Inter-chr p22.1 p36.33 38646 ChimerSeq STARFusion TCGA_RNA-Seq PAK2-DLG1 PAK2 chr3 196532254 + DLG1 chr3 196888609 - Exonic hg19 OV TCGA-25-1328-01A 4 8 In-Frame Intra-chr q29 STE:STE20 q29 Tumor suppressor gene Seq+ 38647 ChimerSeq STARFusion TCGA_RNA-Seq PAK2-DLG1 PAK2 chr3 196532254 + DLG1 chr3 196869639 - Exonic hg19 OV TCGA-25-1328-01A 2 8 In-Frame Intra-chr q29 STE:STE20 q29 Tumor suppressor gene Seq+ 38648 ChimerSeq STARFusion TCGA_RNA-Seq SUPV3L1-VPS26A SUPV3L1 chr10 70962799 + VPS26A chr10 70915568 + Exonic hg19 OV TCGA-36-1578-01A 51 18 In-Frame Intra-chr q22.1 q22.1 Seq+ 38649 ChimerSeq STARFusion TCGA_RNA-Seq GPC1-RPL28 GPC1 chr2 241392439 + RPL28 chr19 55897716 + Exonic hg19 OV TCGA-36-1578-01A 37 0 Out-of-frame Inter-chr q37.3 q13.42 38650 ChimerSeq STARFusion TCGA_RNA-Seq URI1-TYW1B URI1 chr19 30433571 + TYW1B chr7 72081824 - Exonic hg19 OV TCGA-36-1578-01A 29 24 In-Frame Inter-chr q12 q11.23 Seq+ 38651 ChimerSeq STARFusion TCGA_RNA-Seq EEF1G-SLC22A6 EEF1G chr11 62334278 - SLC22A6 chr11 62703958 - Exonic hg19 OV TCGA-36-1578-01A 26 29 CDS-3'UTR Intra-chr q12.3 q12.3 Seq+ 38652 ChimerSeq STARFusion TCGA_RNA-Seq MIR3654-SLC22A6 MIR3654 chr11 62334278 - SLC22A6 chr11 62703958 - Exonic hg19 OV TCGA-36-1578-01A 26 29 Out-of-frame Intra-chr q33 q12.3 38653 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-36-1578-01A 29 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38654 ChimerSeq STARFusion TCGA_RNA-Seq URI1-TYW1B URI1 chr19 30462134 + TYW1B chr7 72081824 - Exonic hg19 OV TCGA-36-1578-01A 17 21 Out-of-frame Inter-chr q12 q11.23 Seq+ 38655 ChimerSeq STARFusion TCGA_RNA-Seq ITPR3-DDX11L1 ITPR3 chr6 33638592 + DDX11L1 chr1 12010 + Exonic hg19 OV TCGA-36-1578-01A 16 14 CDS-3'UTR Inter-chr p21.31 p36.33 38656 ChimerSeq STARFusion TCGA_RNA-Seq EEF1G-SLC22A6 EEF1G chr11 62334278 - SLC22A6 chr11 62704346 - Exonic hg19 OV TCGA-36-1578-01A 10 29 CDS-3'UTR Intra-chr q12.3 q12.3 Seq+ 38657 ChimerSeq STARFusion TCGA_RNA-Seq MIR3654-SLC22A6 MIR3654 chr11 62334278 - SLC22A6 chr11 62704346 - Exonic hg19 OV TCGA-36-1578-01A 10 29 Out-of-frame Intra-chr q33 q12.3 38658 ChimerSeq STARFusion TCGA_RNA-Seq EEF1G-SLC22A6 EEF1G chr11 62334278 - SLC22A6 chr11 62708302 - Exonic hg19 OV TCGA-36-1578-01A 4 29 CDS-3'UTR Intra-chr q12.3 q12.3 Seq+ 38659 ChimerSeq STARFusion TCGA_RNA-Seq MIR3654-SLC22A6 MIR3654 chr11 62334278 - SLC22A6 chr11 62708302 - Exonic hg19 OV TCGA-36-1578-01A 4 29 Out-of-frame Intra-chr q33 q12.3 38660 ChimerSeq STARFusion TCGA_RNA-Seq ZNF721-YAP1 ZNF721 chr4 492845 - YAP1 chr11 102056749 + Exonic hg19 OV TCGA-36-1578-01A 4 20 5'UTR-CDS Inter-chr p16.3 Transcription factor q22.1 Tumor suppressor gene Seq+ 38661 ChimerSeq STARFusion TCGA_RNA-Seq TNS1-SNX1 TNS1 chr2 218843488 - SNX1 chr15 64404772 + Exonic hg19 OV TCGA-31-1951-01A 148 7 5'UTR-CDS Inter-chr q35 q22.31 Seq+ 38662 ChimerSeq STARFusion TCGA_RNA-Seq ANAPC7-PDE11A ANAPC7 chr12 110832906 - PDE11A chr2 178592900 - Exonic hg19 OV TCGA-31-1951-01A 67 6 In-Frame Inter-chr q24.11 q31.2 Seq+ 38663 ChimerSeq STARFusion TCGA_RNA-Seq FBXL5-PROM1 FBXL5 chr4 15613889 - PROM1 chr4 16020163 - Exonic hg19 OV TCGA-31-1951-01A 63 4 In-Frame Intra-chr p15.32 p15.32 Seq+ 38664 ChimerSeq STARFusion TCGA_RNA-Seq SAP30BP-LLGL2 SAP30BP chr17 73667943 + LLGL2 chr17 73559097 + Exonic hg19 OV TCGA-31-1951-01A 61 8 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 38665 ChimerSeq STARFusion TCGA_RNA-Seq PERP-TULP1 PERP chr6 138428264 - TULP1 chr6 35477705 - Exonic hg19 OV TCGA-31-1951-01A 53 4 In-Frame Intra-chr q23.3 p21.31 Seq+ 38666 ChimerSeq STARFusion TCGA_RNA-Seq TPRA1-MCM2 TPRA1 chr3 127309253 - MCM2 chr3 127334705 + Exonic hg19 OV TCGA-31-1951-01A 40 4 5'UTR-CDS Intra-chr q21.3 q21.3 Seq+ 38667 ChimerSeq STARFusion TCGA_RNA-Seq GALNT11-ORAI1 GALNT11 chr7 151722969 + ORAI1 chr12 122078947 + Exonic hg19 OV TCGA-31-1951-01A 39 4 5'UTR-CDS Inter-chr q36.1 q24.31 Seq+ 38668 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-31-1951-01A 37 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38669 ChimerSeq STARFusion TCGA_RNA-Seq SEC23B-DTD1 SEC23B chr20 18488634 + DTD1 chr20 18724744 + Exonic hg19 OV TCGA-31-1951-01A 30 1 5'UTR-CDS Intra-chr p11.23 p11.23 Seq+ 38670 ChimerSeq STARFusion TCGA_RNA-Seq TGM2-KIAA1755 TGM2 chr20 36789822 - KIAA1755 chr20 36874528 - Exonic hg19 OV TCGA-31-1951-01A 29 5 Out-of-frame Intra-chr q11.23 q11.23 38671 ChimerSeq STARFusion TCGA_RNA-Seq TRAF3IP1-GALNTL5 TRAF3IP1 chr2 239258049 + GALNTL5 chr7 151716731 + Exonic hg19 OV TCGA-31-1951-01A 29 4 Out-of-frame Inter-chr q37.3 q36.1 Seq+ 38672 ChimerSeq STARFusion TCGA_RNA-Seq CDK5RAP1-TMEM248 CDK5RAP1 chr20 31967267 - TMEM248 chr7 66406835 + Exonic hg19 OV TCGA-31-1951-01A 24 5 Out-of-frame Inter-chr q11.21 q11.21 Seq+ 38673 ChimerSeq STARFusion TCGA_RNA-Seq ENGASE-TNRC6C ENGASE chr17 77076446 + TNRC6C chr17 76082584 + Exonic hg19 OV TCGA-31-1951-01A 22 2 In-Frame Intra-chr q25.3 q25.3 Seq+ 38674 ChimerSeq STARFusion TCGA_RNA-Seq EPHA1-ZYX EPHA1 chr7 143087423 - ZYX chr7 143085861 + Exonic hg19 OV TCGA-31-1951-01A 18 5 Out-of-frame Intra-chr q35 Tumor suppressor gene q34 Tumor suppressor gene 38675 ChimerSeq STARFusion TCGA_RNA-Seq POR-CTTNBP2 POR chr7 75583498 + CTTNBP2 chr7 117368321 - Exonic hg19 OV TCGA-31-1951-01A 18 1 Out-of-frame Intra-chr q11.23 q31.31 Seq+ 38676 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069800 - Exonic hg19 OV TCGA-31-1951-01A 13 0 Out-of-frame Inter-chr q12.3 q32.2 38677 ChimerSeq STARFusion TCGA_RNA-Seq FAM171A1-ITGA8 FAM171A1 chr10 15412955 - ITGA8 chr10 15686220 - Exonic hg19 OV TCGA-31-1951-01A 12 3 In-Frame Intra-chr p13 p13 Seq+ 38678 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-31-1951-01A 12 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38679 ChimerSeq STARFusion TCGA_RNA-Seq SEC23B-DTD1 SEC23B chr20 18488616 + DTD1 chr20 18724744 + Exonic hg19 OV TCGA-31-1951-01A 10 1 5'UTR-CDS Intra-chr p11.23 p11.23 Seq+ 38680 ChimerSeq STARFusion TCGA_RNA-Seq TPRA1-MCM2 TPRA1 chr3 127310733 - MCM2 chr3 127334705 + Exonic hg19 OV TCGA-31-1951-01A 7 4 5'UTR-CDS Intra-chr q21.3 q21.3 Seq+ 38681 ChimerSeq STARFusion TCGA_RNA-Seq ARIH2-PRKAR2A ARIH2 chr3 48982614 + PRKAR2A chr3 48845117 - Exonic hg19 OV TCGA-31-1951-01A 7 3 Out-of-frame Intra-chr p21.31 p21.31 38682 ChimerSeq STARFusion TCGA_RNA-Seq NF1-TPMT NF1 chr17 29422387 + TPMT chr6 18149402 - Exonic hg19 OV TCGA-13-0714-01A 12 5 CDS-5'UTR Inter-chr q11.2 Oncogene Tumor suppressor gene p22.3 Seq+ 38683 ChimerSeq STARFusion TCGA_RNA-Seq UPF3A-CDC16 UPF3A chr13 115048418 + CDC16 chr13 115007596 + Exonic hg19 OV TCGA-13-0714-01A 13 0 Out-of-frame Intra-chr q34 q34 Seq+ 38684 ChimerSeq STARFusion TCGA_RNA-Seq PLD3-RPS9 PLD3 chr19 40854675 + RPS9 chr19 54735617 + Exonic hg19 OV TCGA-24-1850-01A 42 5 5'UTR-3'UTR Intra-chr q13.2 Seq+ 38685 ChimerSeq STARFusion TCGA_RNA-Seq KIRREL-HMMR KIRREL chr1 157963518 + HMMR chr5 162890862 + Exonic hg19 OV TCGA-24-1850-01A 17 1 In-Frame Inter-chr q23.1 q34 Seq+ 38686 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-1850-01A 16 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38687 ChimerSeq STARFusion TCGA_RNA-Seq PLD3-RPS9 PLD3 chr19 40854631 + RPS9 chr19 54735617 + Exonic hg19 OV TCGA-24-1850-01A 10 5 5'UTR-3'UTR Intra-chr q13.2 Seq+ 38688 ChimerSeq STARFusion TCGA_RNA-Seq SERGEF-B4GALT6 SERGEF chr11 17899755 - B4GALT6 chr18 29246335 - Exonic hg19 OV TCGA-24-1850-01A 7 0 In-Frame Inter-chr p15.1 q12.1 38689 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-24-1850-01A 6 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38690 ChimerSeq STARFusion TCGA_RNA-Seq TFE3-AP2A2 TFE3 chrX 48896632 - AP2A2 chr11 1000432 + Exonic hg19 OV TCGA-24-1850-01A 6 0 In-Frame Inter-chr p11.23 Oncogene Transcription factor p15.5 38691 ChimerSeq STARFusion TCGA_RNA-Seq GRAMD4-WBSCR17 GRAMD4 chr22 46973187 + WBSCR17 chr7 70800536 + Exonic hg19 OV TCGA-23-1023-01A 14 0 5'UTR-CDS Inter-chr q13.31 q11.22 38692 ChimerSeq STARFusion TCGA_RNA-Seq COL18A1-ADARB1 COL18A1 chr21 46931140 + ADARB1 chr21 46624470 + Exonic hg19 OV TCGA-25-2396-01A 44 3 In-Frame Intra-chr q22.3 q22.3 Tumor suppressor gene Seq+ 38693 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-NADK GNB1 chr1 1822259 - NADK chr1 1696885 - Exonic hg19 OV TCGA-25-2396-01A 33 1 5'UTR-5'UTR Intra-chr p36.33 p36.33 Seq+ 38694 ChimerSeq STARFusion TCGA_RNA-Seq BRD4-CYP4F22 BRD4 chr19 15443101 - CYP4F22 chr19 15634504 + Exonic hg19 OV TCGA-25-2396-01A 19 3 5'UTR-5'UTR Intra-chr p13.12 Atypical:BRD p13.12 Seq+ 38695 ChimerSeq STARFusion TCGA_RNA-Seq SMAP2-CAP1 SMAP2 chr1 40839895 + CAP1 chr1 40525009 + Exonic hg19 OV TCGA-25-2396-01A 11 1 CDS-5'UTR Intra-chr p34.2 p34.2 Seq+ 38696 ChimerSeq STARFusion TCGA_RNA-Seq DLGAP4-TGIF2 DLGAP4 chr20 35091002 + TGIF2 chr20 35207144 + Exonic hg19 OV TCGA-25-2396-01A 11 0 CDS-5'UTR Intra-chr q11.23 q11.23 Transcription factor 38697 ChimerSeq STARFusion TCGA_RNA-Seq SPTAN1-TBC1D13 SPTAN1 chr9 131331176 + TBC1D13 chr9 131565529 + Exonic hg19 OV TCGA-57-1993-01A 76 23 In-Frame Intra-chr q34.11 q34.11 Seq+ 38698 ChimerSeq STARFusion TCGA_RNA-Seq FASTKD5-LZTS3 FASTKD5 chr20 3140412 - LZTS3 chr20 3148607 - Exonic hg19 OV TCGA-57-1993-01A 34 45 Out-of-frame Intra-chr p13 p13 Seq+ 38699 ChimerSeq STARFusion TCGA_RNA-Seq UBOX5-LZTS3 UBOX5 chr20 3140412 - LZTS3 chr20 3148607 - Exonic hg19 OV TCGA-57-1993-01A 34 45 Out-of-frame Intra-chr p13 p13 Seq+ 38700 ChimerSeq STARFusion TCGA_RNA-Seq EIF3M-CSTF3 EIF3M chr11 32605475 + CSTF3 chr11 33163532 - Exonic hg19 OV TCGA-57-1993-01A 16 26 In-Frame Intra-chr p13 p13 Seq+ 38701 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-57-1993-01A 21 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38702 ChimerSeq STARFusion TCGA_RNA-Seq INTS4-NARS2 INTS4 chr11 77666988 - NARS2 chr11 78177059 - Exonic hg19 OV TCGA-57-1993-01A 18 5 In-Frame Intra-chr q14.1 q14.1 Seq+ 38703 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-57-1993-01A 15 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38704 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0753-HSBP1L1 KIAA0753 chr17 6543957 - HSBP1L1 chr18 77730440 + Exonic hg19 OV TCGA-57-1993-01A 12 3 5'UTR-CDS Inter-chr p13.1 q23 Seq+ 38705 ChimerSeq STARFusion TCGA_RNA-Seq MYL12A-MYOM1 MYL12A chr18 3254048 + MYOM1 chr18 3219876 - Exonic hg19 OV TCGA-57-1993-01A 10 3 CDS-5'UTR Intra-chr p11.31 p11.31 Seq+ 38706 ChimerSeq STARFusion TCGA_RNA-Seq LPIN2-COPS3 LPIN2 chr18 3013085 - COPS3 chr17 17152353 - Exonic hg19 OV TCGA-57-1993-01A 3 5 5'UTR-CDS Inter-chr p11.31 p11.2 Seq+ 38707 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC1-DAD1 SMARCC1 chr3 47814307 - DAD1 chr14 23044133 - Exonic hg19 OV TCGA-13-1501-01A 50 13 Out-of-frame Inter-chr p21.31 Tumor suppressor gene q11.2 Seq+ 38708 ChimerSeq STARFusion TCGA_RNA-Seq TRPM4-ELOF1 TRPM4 chr19 49661516 + ELOF1 chr19 11665180 - Exonic hg19 OV TCGA-13-1501-01A 39 28 CDS-5'UTR Intra-chr q13.33 p13.2 Seq+ 38709 ChimerSeq STARFusion TCGA_RNA-Seq TRPM4-ELOF1 TRPM4 chr19 49661147 + ELOF1 chr19 11665180 - Exonic hg19 OV TCGA-13-1501-01A 23 27 CDS-5'UTR Intra-chr q13.33 p13.2 Seq+ 38710 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-13-1501-01A 25 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38711 ChimerSeq STARFusion TCGA_RNA-Seq NAT10-CAPRIN1 NAT10 chr11 34127339 + CAPRIN1 chr11 34118026 + Exonic hg19 OV TCGA-13-1501-01A 18 3 5'UTR-CDS Intra-chr p13 p13 Seq+ 38712 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-13-1501-01A 17 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38713 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-13-1501-01A 16 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38714 ChimerSeq STARFusion TCGA_RNA-Seq EXOC2-GMDS EXOC2 chr6 572520 - GMDS chr6 1742820 - Exonic hg19 OV TCGA-13-1501-01A 11 5 In-Frame Intra-chr p25.3 p25.3 Seq+ 38715 ChimerSeq STARFusion TCGA_RNA-Seq GSTA4-ABCC11 GSTA4 chr6 52858906 - ABCC11 chr16 48278532 - Exonic hg19 OV TCGA-13-1501-01A 11 4 Out-of-frame Inter-chr p12.2 q12.1 38716 ChimerSeq STARFusion TCGA_RNA-Seq NT5C-HN1 NT5C chr17 73127276 - HN1 chr17 73132345 - Exonic hg19 OV TCGA-29-1776-01A 8 3 Out-of-frame Intra-chr q25.1 Seq+ 38717 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-0975-01A 45 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38718 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-24-0975-01A 22 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38719 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-24-0975-01A 14 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38720 ChimerSeq STARFusion TCGA_RNA-Seq CCND1-IGF2 CCND1 chr11 69467537 + IGF2 chr11 2153255 - Exonic hg19 OV TCGA-24-0975-01A 3 29 Out-of-frame Intra-chr q13.3 Oncogene p15.5 Oncogene 38721 ChimerSeq STARFusion TCGA_RNA-Seq CCND1-IGF2 CCND1 chr11 69467547 + IGF2 chr11 2152959 - Exonic hg19 OV TCGA-24-0975-01A 3 29 Out-of-frame Intra-chr q13.3 Oncogene p15.5 Oncogene 38722 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-IGF2 FTH1 chr11 61732234 - IGF2 chr11 2152933 - Exonic hg19 OV TCGA-24-0975-01A 3 10 Out-of-frame Intra-chr q12.3 p15.5 Oncogene 38723 ChimerSeq STARFusion TCGA_RNA-Seq BAZ2A-ATP5B BAZ2A chr12 57024560 - ATP5B chr12 57032207 - Exonic hg19 OV TCGA-29-1701-01A 30 1 Out-of-frame Intra-chr q13.3 Transcription factor q13.3 Seq+ 38724 ChimerSeq STARFusion TCGA_RNA-Seq BAZ2A-ATP5B BAZ2A chr12 57023909 - ATP5B chr12 57032207 - Exonic hg19 OV TCGA-29-1701-01A 18 1 Out-of-frame Intra-chr q13.3 Transcription factor q13.3 Seq+ 38725 ChimerSeq STARFusion TCGA_RNA-Seq ZNF850-COX6B1 ZNF850 chr19 37252545 - COX6B1 chr19 36149496 + Exonic hg19 OV TCGA-29-1701-01A 10 0 Out-of-frame Intra-chr q13.12 Transcription factor q13.12 Seq+ 38726 ChimerSeq STARFusion TCGA_RNA-Seq ZNF136-CALR ZNF136 chr19 12274021 + CALR chr19 13049948 + Exonic hg19 OV TCGA-29-1701-01A 8 3 Out-of-frame Intra-chr p13.2 Transcription factor p13.13 Seq+ 38727 ChimerSeq STARFusion TCGA_RNA-Seq ACO2-UBE2A ACO2 chr22 41865186 + UBE2A chrX 118715470 + Exonic hg19 OV TCGA-09-1659-01B 119 7 5'UTR-CDS Inter-chr q13.2 q24 Seq+ 38728 ChimerSeq STARFusion TCGA_RNA-Seq ACO2-UBE2A ACO2 chr22 41865186 + UBE2A chrX 118716551 + Exonic hg19 OV TCGA-09-1659-01B 114 7 5'UTR-CDS Inter-chr q13.2 q24 Seq+ 38729 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-C16orf62 FAM222B chr17 27169700 - C16orf62 chr16 19627436 + Exonic hg19 OV TCGA-09-1659-01B 49 13 5'UTR-CDS Inter-chr q11.2 p12.3 Seq+ 38730 ChimerSeq STARFusion TCGA_RNA-Seq CBLC-PDXDC2P CBLC chr19 45303707 + PDXDC2P chr16 70020412 - Exonic hg19 OV TCGA-09-1659-01B 28 20 3'UTR-3'UTR Inter-chr q13.32 q22.1 Seq+ 38731 ChimerSeq STARFusion TCGA_RNA-Seq RPL13P12-PNMA2 RPL13P12 chr17 17286669 - PNMA2 chr8 26364477 - Exonic hg19 OV TCGA-09-1659-01B 30 0 Out-of-frame Inter-chr p21.2 38732 ChimerSeq STARFusion TCGA_RNA-Seq CRK-PITPNA CRK chr17 1359171 - PITPNA chr17 1442246 - Exonic hg19 OV TCGA-09-1659-01B 23 9 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 38733 ChimerSeq STARFusion TCGA_RNA-Seq HS2ST1-NXNL2 HS2ST1 chr1 87380843 + NXNL2 chr9 91190002 + Exonic hg19 OV TCGA-09-1659-01B 19 17 CDS-3'UTR Inter-chr p22.3 q22.1 Seq+ 38734 ChimerSeq STARFusion TCGA_RNA-Seq ACO2-UBE2A ACO2 chr22 41865512 + UBE2A chrX 118715470 + Exonic hg19 OV TCGA-09-1659-01B 18 7 5'UTR-CDS Inter-chr q13.2 q24 Seq+ 38735 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-09-1659-01B 18 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38736 ChimerSeq STARFusion TCGA_RNA-Seq RALA-YAE1D1 RALA chr7 39663424 + YAE1D1 chr7 39610105 + Exonic hg19 OV TCGA-09-1659-01B 8 6 5'UTR-CDS Intra-chr p14.1 p14.1 38737 ChimerSeq STARFusion TCGA_RNA-Seq HS2ST1-NXNL2 HS2ST1 chr1 87380843 + NXNL2 chr9 91198914 + Exonic hg19 OV TCGA-09-1659-01B 4 17 CDS-3'UTR Inter-chr p22.3 q22.1 Seq+ 38738 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5P1-DCTPP1 SLC7A5P1 chr16 29624424 - DCTPP1 chr16 30440488 - Exonic hg19 OV TCGA-VG-A8LO-01A 284 81 3'UTR-CDS Intra-chr p11.2 p11.2 38739 ChimerSeq STARFusion TCGA_RNA-Seq SORL1-CEP164 SORL1 chr11 121367758 + CEP164 chr11 117251330 + Exonic hg19 OV TCGA-VG-A8LO-01A 196 58 In-Frame Intra-chr q24.1 q23.3 Seq+ 38740 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V1H-TCEA1 ATP6V1H chr8 54742004 - TCEA1 chr8 54912610 - Exonic hg19 OV TCGA-VG-A8LO-01A 102 40 In-Frame Intra-chr q11.23 q11.23 Seq+ 38741 ChimerSeq STARFusion TCGA_RNA-Seq CLDN7-TMEM256 CLDN7 chr17 7165140 - TMEM256 chr17 7307008 - Exonic hg19 OV TCGA-VG-A8LO-01A 91 58 Out-of-frame Intra-chr p13.1 Seq+ 38742 ChimerSeq STARFusion TCGA_RNA-Seq PICALM-ME3 PICALM chr11 85707869 - ME3 chr11 86198482 - Exonic hg19 OV TCGA-VG-A8LO-01A 55 21 Out-of-frame Intra-chr q14.2 q14.2 Seq+ 38743 ChimerSeq STARFusion TCGA_RNA-Seq LMBR1-PTPRN2 LMBR1 chr7 156516806 - PTPRN2 chr7 157691429 - Exonic hg19 OV TCGA-VG-A8LO-01A 53 18 In-Frame Intra-chr q36.3 q36.3 Seq+ 38744 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R37-CLASRP PPP1R37 chr19 45596785 + CLASRP chr19 45570595 + Exonic hg19 OV TCGA-VG-A8LO-01A 50 19 Out-of-frame Intra-chr q13.32 q13.32 Seq+ 38745 ChimerSeq STARFusion TCGA_RNA-Seq CLDN7-TMEM256 CLDN7 chr17 7163961 - TMEM256 chr17 7307008 - Exonic hg19 OV TCGA-VG-A8LO-01A 25 58 Out-of-frame Intra-chr p13.1 Seq+ 38746 ChimerSeq STARFusion TCGA_RNA-Seq CPSF1-RECQL4 CPSF1 chr8 145624666 - RECQL4 chr8 145742148 - Exonic hg19 OV TCGA-VG-A8LO-01A 32 24 In-Frame Intra-chr q24.3 q24.3 Oncogene Seq+ 38747 ChimerSeq STARFusion TCGA_RNA-Seq SKAP1-HOXB9 SKAP1 chr17 46423267 - HOXB9 chr17 46700497 - Exonic hg19 OV TCGA-VG-A8LO-01A 31 7 In-Frame Intra-chr q21.32 q21.32 Transcription factor Seq+ 38748 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L4B-PTPN3 EPB41L4B chr9 112042097 - PTPN3 chr9 112153841 - Exonic hg19 OV TCGA-VG-A8LO-01A 30 8 In-Frame Intra-chr q31.3 q31.3 Seq+ 38749 ChimerSeq STARFusion TCGA_RNA-Seq CPSF1-RECQL4 CPSF1 chr8 145624552 - RECQL4 chr8 145742199 - Exonic hg19 OV TCGA-VG-A8LO-01A 16 24 Out-of-frame Intra-chr q24.3 q24.3 Oncogene Seq+ 38750 ChimerSeq STARFusion TCGA_RNA-Seq PARD6B-PTPN1 PARD6B chr20 49348389 + PTPN1 chr20 49177900 + Exonic hg19 OV TCGA-VG-A8LO-01A 14 9 In-Frame Intra-chr q13.13 q13.13 Tumor suppressor gene Seq+ 38751 ChimerSeq STARFusion TCGA_RNA-Seq PICALM-ME3 PICALM chr11 85707869 - ME3 chr11 86176242 - Exonic hg19 OV TCGA-VG-A8LO-01A 9 21 Out-of-frame Intra-chr q14.2 q14.2 Seq+ 38752 ChimerSeq STARFusion TCGA_RNA-Seq PIR-ACE2 PIR chrX 15477780 - ACE2 chrX 15613126 - Exonic hg19 OV TCGA-VG-A8LO-01A 12 7 In-Frame Intra-chr p22.2 p22.2 Seq+ 38753 ChimerSeq STARFusion TCGA_RNA-Seq ZNF784-NLRP9 ZNF784 chr19 56133132 - NLRP9 chr19 56220104 - Exonic hg19 OV TCGA-VG-A8LO-01A 12 2 Out-of-frame Intra-chr q13.42 Transcription factor q13.42 Seq+ 38754 ChimerSeq STARFusion TCGA_RNA-Seq RARA-CDK12 RARA chr17 38504716 + CDK12 chr17 37686857 + Exonic hg19 OV TCGA-3P-A9WA-01A 57 21 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q12 Oncogene Seq+ 38755 ChimerSeq STARFusion TCGA_RNA-Seq RARA-CDK12 RARA chr17 38504716 + CDK12 chr17 37686884 + Exonic hg19 OV TCGA-3P-A9WA-01A 51 21 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q12 Oncogene Seq+ 38756 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0232-MAN2B2 KIAA0232 chr4 6878484 + MAN2B2 chr4 6610834 + Exonic hg19 OV TCGA-3P-A9WA-01A 45 10 Out-of-frame Intra-chr p16.1 p16.1 Seq+ 38757 ChimerSeq STARFusion TCGA_RNA-Seq STX18-LYAR STX18 chr4 4440121 - LYAR chr4 4288299 - Exonic hg19 OV TCGA-3P-A9WA-01A 31 6 CDS-5'UTR Intra-chr p16.2 p16.3 Seq+ 38758 ChimerSeq STARFusion TCGA_RNA-Seq STX18-LYAR STX18 chr4 4440121 - LYAR chr4 4285522 - Exonic hg19 OV TCGA-3P-A9WA-01A 18 6 CDS-5'UTR Intra-chr p16.2 p16.3 Seq+ 38759 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-CCDC146 PTPN12 chr7 77214898 + CCDC146 chr7 76958713 + Exonic hg19 OV TCGA-3P-A9WA-01A 14 2 CDS-3'UTR Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 38760 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-CDK12 WIPF2 chr17 38421398 + CDK12 chr17 37721013 + Exonic hg19 OV TCGA-3P-A9WA-01A 13 2 CDS-3'UTR Intra-chr q21.2 q12 Oncogene Seq+ 38761 ChimerSeq STARFusion TCGA_RNA-Seq RARA-CDK12 RARA chr17 38504716 + CDK12 chr17 37700502 + Exonic hg19 OV TCGA-3P-A9WA-01A 8 21 CDS-3'UTR Intra-chr q21.2 Oncogene Transcription factor q12 Oncogene Seq+ 38762 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-25-1316-01A 20 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38763 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-25-1316-01A 14 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38764 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-25-1316-01A 11 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38765 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R2A-ZDHHC2 PPP2R2A chr8 26151256 + ZDHHC2 chr8 17074681 + Exonic hg19 OV TCGA-25-1632-01A 189 84 In-Frame Intra-chr p21.2 p22 Tumor suppressor gene Seq+ 38766 ChimerSeq STARFusion TCGA_RNA-Seq UBE2D3-MANBA UBE2D3 chr4 103722611 - MANBA chr4 103611928 - Exonic hg19 OV TCGA-25-1632-01A 132 56 In-Frame Intra-chr q24 q24 38767 ChimerSeq STARFusion TCGA_RNA-Seq NPAS3-RB1 NPAS3 chr14 33404209 + RB1 chr13 49039134 + Exonic hg19 OV TCGA-25-1632-01A 84 55 5'UTR-CDS Inter-chr q13.1 Transcription factor q14.2 Oncogene Tumor suppressor gene Seq+ 38768 ChimerSeq STARFusion TCGA_RNA-Seq PIN4-LPCAT2 PIN4 chrX 71401678 + LPCAT2 chr16 55579647 + Exonic hg19 OV TCGA-25-1632-01A 58 1 Out-of-frame Inter-chr q13.1 q12.2 Seq+ 38769 ChimerSeq STARFusion TCGA_RNA-Seq NPAS3-RB1 NPAS3 chr14 33408572 + RB1 chr13 49039134 + Exonic hg19 OV TCGA-25-1632-01A 29 55 Out-of-frame Inter-chr q13.1 Transcription factor q14.2 Oncogene Tumor suppressor gene Seq+ 38770 ChimerSeq STARFusion TCGA_RNA-Seq ANKFY1-SPINT2 ANKFY1 chr17 4077204 - SPINT2 chr19 38774267 + Exonic hg19 OV TCGA-25-1632-01A 19 12 In-Frame Inter-chr p13.2 q13.2 Tumor suppressor gene Seq+ 38771 ChimerSeq STARFusion TCGA_RNA-Seq PRKCI-SAMD7 PRKCI chr3 169940558 + SAMD7 chr3 169629521 + Exonic hg19 OV TCGA-25-1632-01A 18 9 CDS-5'UTR Intra-chr q26.2 q26.2 Seq+ 38772 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-25-1632-01A 19 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38773 ChimerSeq STARFusion TCGA_RNA-Seq PRKCI-SAMD7 PRKCI chr3 169940558 + SAMD7 chr3 169637246 + Exonic hg19 OV TCGA-25-1632-01A 8 8 CDS-5'UTR Intra-chr q26.2 q26.2 Seq+ 38774 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L1-PCNX SIPA1L1 chr14 71880731 + PCNX chr14 71540262 + Exonic hg19 OV TCGA-59-2350-01A 13 6 5'UTR-CDS Intra-chr q24.2 38775 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L1-PCNX SIPA1L1 chr14 71787898 + PCNX chr14 71540262 + Exonic hg19 OV TCGA-59-2350-01A 11 6 5'UTR-CDS Intra-chr q24.2 38776 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L1-PCNX SIPA1L1 chr14 71884913 + PCNX chr14 71540262 + Exonic hg19 OV TCGA-59-2350-01A 3 6 5'UTR-CDS Intra-chr q24.2 38777 ChimerSeq STARFusion TCGA_RNA-Seq CCDC134-MEI1 CCDC134 chr22 42196770 + MEI1 chr22 42189833 + Exonic hg19 OV TCGA-13-0887-01A 29 90 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 38778 ChimerSeq STARFusion TCGA_RNA-Seq DGKG-CRYGS DGKG chr3 186079735 - CRYGS chr3 186257386 - Exonic hg19 OV TCGA-13-0887-01A 24 50 5'UTR-CDS Intra-chr q27.3 q27.3 Seq+ 38779 ChimerSeq STARFusion TCGA_RNA-Seq NFIX-CALR NFIX chr19 13136366 + CALR chr19 13049948 + Exonic hg19 OV TCGA-13-0887-01A 25 12 In-Frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 38780 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734943 - ZFHX3 chr16 72821631 - Exonic hg19 OV TCGA-13-0887-01A 13 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38781 ChimerSeq STARFusion TCGA_RNA-Seq TSC2-TRAF7 TSC2 chr16 2113054 + TRAF7 chr16 2213884 + Exonic hg19 OV TCGA-13-0887-01A 7 3 CDS-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Oncogene 38782 ChimerSeq STARFusion TCGA_RNA-Seq GMPR2-TSSK4 GMPR2 chr14 24702799 + TSSK4 chr14 24677170 + Exonic hg19 OV TCGA-13-0887-01A 6 6 In-Frame Intra-chr q12 q12 CAMK:TSSK 38783 ChimerSeq STARFusion TCGA_RNA-Seq NFIX-CALR NFIX chr19 13136366 + CALR chr19 13050242 + Exonic hg19 OV TCGA-13-0887-01A 3 12 In-Frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 38784 ChimerSeq STARFusion TCGA_RNA-Seq COL14A1-DEPTOR COL14A1 chr8 121160169 + DEPTOR chr8 121061815 + Exonic hg19 OV TCGA-57-1586-01A 80 9 Out-of-frame Intra-chr q24.12 q24.12 Seq+ 38785 ChimerSeq STARFusion TCGA_RNA-Seq PIEZO1-CBFA2T3 PIEZO1 chr16 88798114 - CBFA2T3 chr16 88968064 - Exonic hg19 OV TCGA-57-1586-01A 77 17 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene Seq+ 38786 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT2-JAK1 B4GALT2 chr1 44447596 + JAK1 chr1 65352024 - Exonic hg19 OV TCGA-57-1586-01A 44 3 CDS-5'UTR Intra-chr p34.1 p31.3 TK:JakA Oncogene Seq+ 38787 ChimerSeq STARFusion TCGA_RNA-Seq PHRF1-RASSF7 PHRF1 chr11 591467 + RASSF7 chr11 561762 + Exonic hg19 OV TCGA-57-1586-01A 16 3 CDS-5'UTR Intra-chr p15.5 p15.5 Seq+ 38788 ChimerSeq STARFusion TCGA_RNA-Seq SMURF1-FAM200A SMURF1 chr7 98741349 - FAM200A chr7 99146129 - Exonic hg19 OV TCGA-57-1586-01A 10 2 CDS-5'UTR Intra-chr q22.1 Seq+ 38789 ChimerSeq STARFusion TCGA_RNA-Seq CD99L2-G6PD CD99L2 chrX 149999704 - G6PD chrX 153764393 - Exonic hg19 OV TCGA-61-2008-01A 19 0 Out-of-frame Intra-chr q28 q28 Oncogene Seq+ 38790 ChimerSeq STARFusion TCGA_RNA-Seq RBMS1-IGH@ RBMS1 chr2 161157162 - IGH@ chr14 107283096 - Exonic hg19 OV TCGA-61-2008-01A 15 2 Out-of-frame Inter-chr q24.2 32.33 38791 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069800 - Exonic hg19 OV TCGA-61-2008-01A 13 0 Out-of-frame Inter-chr q12.3 q32.2 38792 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-61-2008-01A 11 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38793 ChimerSeq STARFusion TCGA_RNA-Seq MECOM-LRRC31 MECOM chr3 169381124 - LRRC31 chr3 169587660 - Exonic hg19 OV TCGA-61-1911-01A 6 0 5'UTR-5'UTR Intra-chr q26.2 Transcription factor q26.2 Seq+ 38794 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2IP-NLN ERBB2IP chr5 65350779 + NLN chr5 65073254 + Exonic hg19 OV TCGA-61-1911-01A 4 0 In-Frame Intra-chr q12.3 Seq+ 38795 ChimerSeq STARFusion TCGA_RNA-Seq NSFL1C-EPSTI1 NSFL1C chr20 1435612 - EPSTI1 chr13 43528157 - Exonic hg19 OV TCGA-61-1911-01A 4 0 In-Frame Inter-chr p13 q14.11 Seq+ 38796 ChimerSeq STARFusion TCGA_RNA-Seq SOX10-IGHGP SOX10 chr22 38379718 - IGHGP chr14 106134591 - Exonic hg19 OV TCGA-61-1911-01A 4 0 Out-of-frame Inter-chr q13.1 Transcription factor 38797 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-29-1690-01A 29 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38798 ChimerSeq STARFusion TCGA_RNA-Seq RPL13P12-PNMA2 RPL13P12 chr17 17286669 - PNMA2 chr8 26364477 - Exonic hg19 OV TCGA-29-1690-01A 22 0 Out-of-frame Inter-chr p21.2 38799 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-29-1690-01A 21 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38800 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-UBE2D2 MATR3 chr5 138658656 + UBE2D2 chr5 138979957 + Exonic hg19 OV TCGA-13-0724-01A 23 12 In-Frame Intra-chr q31.2 q31.2 Seq+ 38801 ChimerSeq STARFusion TCGA_RNA-Seq RPL13P12-PNMA2 RPL13P12 chr17 17286669 - PNMA2 chr8 26364477 - Exonic hg19 OV TCGA-13-0724-01A 19 0 Out-of-frame Inter-chr p21.2 38802 ChimerSeq STARFusion TCGA_RNA-Seq TRAF3-IFNL1 TRAF3 chr14 103244012 + IFNL1 chr19 39787445 + Exonic hg19 OV TCGA-13-0724-01A 16 2 Out-of-frame Inter-chr q32.32 q13.2 Seq+ 38803 ChimerSeq STARFusion TCGA_RNA-Seq FAM131B-GIPC1 FAM131B chr7 143059852 - GIPC1 chr19 14603726 - Exonic hg19 OV TCGA-13-0724-01A 8 0 Out-of-frame Inter-chr q34 p13.12 38804 ChimerSeq STARFusion TCGA_RNA-Seq CD97-CCDC130 CD97 chr19 14501891 + CCDC130 chr19 13862422 + Exonic hg19 OV TCGA-13-0724-01A 5 2 CDS-5'UTR Intra-chr p13.13 38805 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM4-PLEKHA4 R3HDM4 chr19 913087 - PLEKHA4 chr19 49344567 - Exonic hg19 OV TCGA-29-1783-01A 99 103 Out-of-frame Intra-chr p13.3 q13.33 Seq+ 38806 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM4-PLEKHA4 R3HDM4 chr19 913087 - PLEKHA4 chr19 49341386 - Exonic hg19 OV TCGA-29-1783-01A 78 103 In-Frame Intra-chr p13.3 q13.33 Seq+ 38807 ChimerSeq STARFusion TCGA_RNA-Seq ADNP-KCNG1 ADNP chr20 49547363 - KCNG1 chr20 49628953 - Exonic hg19 OV TCGA-29-1783-01A 54 38 5'UTR-5'UTR Intra-chr q13.13 Transcription factor q13.13 Seq+ 38808 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM4-PLEKHA4 R3HDM4 chr19 913087 - PLEKHA4 chr19 49342520 - Exonic hg19 OV TCGA-29-1783-01A 22 103 Out-of-frame Intra-chr p13.3 q13.33 Seq+ 38809 ChimerSeq STARFusion TCGA_RNA-Seq ADNP-KCNG1 ADNP chr20 49545188 - KCNG1 chr20 49628953 - Exonic hg19 OV TCGA-29-1783-01A 23 38 5'UTR-5'UTR Intra-chr q13.13 Transcription factor q13.13 Seq+ 38810 ChimerSeq STARFusion TCGA_RNA-Seq ADNP-KCNG1 ADNP chr20 49547363 - KCNG1 chr20 49626901 - Exonic hg19 OV TCGA-29-1783-01A 19 38 5'UTR-5'UTR Intra-chr q13.13 Transcription factor q13.13 Seq+ 38811 ChimerSeq STARFusion TCGA_RNA-Seq ADNP-KCNG1 ADNP chr20 49547363 - KCNG1 chr20 49630386 - Exonic hg19 OV TCGA-29-1783-01A 12 38 5'UTR-5'UTR Intra-chr q13.13 Transcription factor q13.13 Seq+ 38812 ChimerSeq STARFusion TCGA_RNA-Seq HSD17B14-SAFB HSD17B14 chr19 49337533 - SAFB chr19 5661569 + Exonic hg19 OV TCGA-29-1783-01A 19 4 Out-of-frame Intra-chr q13.33 p13.3 Tumor suppressor gene Transcription factor Seq+ 38813 ChimerSeq STARFusion TCGA_RNA-Seq SMYD2-KCNK2 SMYD2 chr1 214454770 + KCNK2 chr1 215259711 + Exonic hg19 OV TCGA-29-1783-01A 9 7 Out-of-frame Intra-chr q32.3 q41 Seq+ 38814 ChimerSeq STARFusion TCGA_RNA-Seq UBXN6-GRM4 UBXN6 chr19 4452361 - GRM4 chr6 34008525 - Exonic hg19 OV TCGA-29-1783-01A 9 4 Out-of-frame Inter-chr p13.3 p21.31 Seq+ 38815 ChimerSeq STARFusion TCGA_RNA-Seq NT5C2-LINC00592 NT5C2 chr10 104934615 - LINC00592 chr12 52617230 + Exonic hg19 OV TCGA-13-0911-01A 64 13 CDS-5'UTR Inter-chr q24.33 q13.13 Seq+ 38816 ChimerSeq STARFusion TCGA_RNA-Seq PCGF5-RPP30 PCGF5 chr10 93021181 + RPP30 chr10 92655637 + Exonic hg19 OV TCGA-13-0911-01A 67 0 In-Frame Intra-chr q23.32 q23.31 Seq+ 38817 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-13-0911-01A 16 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38818 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-13-0911-01A 10 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38819 ChimerSeq STARFusion TCGA_RNA-Seq SHISA5-LRRC6 SHISA5 chr3 48538570 - LRRC6 chr8 133596026 - Exonic hg19 OV TCGA-13-0911-01A 10 0 Out-of-frame Inter-chr p21.31 q24.22 Seq+ 38820 ChimerSeq STARFusion TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5463072 - RNF216 chr7 5692141 - Exonic hg19 OV TCGA-13-0911-01A 5 2 5'UTR-CDS Intra-chr p22.1 p22.1 Seq+ 38821 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-13-0906-01A 46 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38822 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC17-RAB10 DNAJC17 chr15 41099567 - RAB10 chr2 26350013 + Exonic hg19 OV TCGA-13-0906-01A 17 16 In-Frame Inter-chr q15.1 p23.3 Seq+ 38823 ChimerSeq STARFusion TCGA_RNA-Seq RAB10-DNAJC17 RAB10 chr2 26332775 + DNAJC17 chr15 41072195 - Exonic hg19 OV TCGA-13-0906-01A 19 5 In-Frame Inter-chr p23.3 q15.1 Seq+ 38824 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-13-0906-01A 12 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38825 ChimerSeq STARFusion TCGA_RNA-Seq ZNF564-POLN ZNF564 chr19 12662144 - POLN chr4 2097660 - Exonic hg19 OV TCGA-13-0906-01A 12 0 Out-of-frame Inter-chr p13.2 Transcription factor p16.3 Seq+ 38826 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-13-0906-01A 8 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38827 ChimerSeq STARFusion TCGA_RNA-Seq SLCO3A1-IGF2 SLCO3A1 chr15 92706462 + IGF2 chr11 2152994 - Exonic hg19 OV TCGA-13-0906-01A 3 12 Out-of-frame Inter-chr q26.1 p15.5 Oncogene 38828 ChimerSeq STARFusion TCGA_RNA-Seq RAB10-DNAJC17 RAB10 chr2 26332775 + DNAJC17 chr15 41072550 - Exonic hg19 OV TCGA-13-0906-01A 4 5 Out-of-frame Inter-chr p23.3 q15.1 Seq+ 38829 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-0982-01A 28 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38830 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-PARVA ANKRD11 chr16 89484692 - PARVA chr11 12495292 + Exonic hg19 OV TCGA-24-0982-01A 8 2 5'UTR-CDS Inter-chr q24.3 p15.3 Seq+ 38831 ChimerSeq STARFusion TCGA_RNA-Seq NSD1-ZNF346 NSD1 chr5 176678854 + ZNF346 chr5 176468127 + Exonic hg19 OV TCGA-24-1427-01A 53 12 In-Frame Intra-chr q35.3 Oncogene q35.2 Transcription factor Seq+ 38832 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-1427-01A 19 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38833 ChimerSeq STARFusion TCGA_RNA-Seq RSRC2-HCAR1 RSRC2 chr12 123005932 - HCAR1 chr12 123105249 - Exonic hg19 OV TCGA-24-1427-01A 16 6 3'UTR-3'UTR Intra-chr q24.31 q24.31 Oncogene 38834 ChimerSeq STARFusion TCGA_RNA-Seq PGS1-SYNGR2 PGS1 chr17 76374889 + SYNGR2 chr17 76167820 + Exonic hg19 OV TCGA-24-1427-01A 12 13 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 38835 ChimerSeq STARFusion TCGA_RNA-Seq HCFC1-IGHG1 HCFC1 chrX 153222118 - IGHG1 chr14 106209407 - Exonic hg19 OV TCGA-13-1505-01A 25 0 Out-of-frame Inter-chr q28 q32.33 38836 ChimerSeq STARFusion TCGA_RNA-Seq MYO9B-TECR MYO9B chr19 17186684 + TECR chr19 14673337 + Exonic hg19 OV TCGA-13-1505-01A 13 16 5'UTR-5'UTR Intra-chr p13.11 p13.12 Seq+ 38837 ChimerSeq STARFusion TCGA_RNA-Seq PEX6-PPP2R5D PEX6 chr6 42946007 - PPP2R5D chr6 42957349 + Exonic hg19 OV TCGA-13-1505-01A 9 5 In-Frame Intra-chr p21.1 p21.1 Seq+ 38838 ChimerSeq STARFusion TCGA_RNA-Seq CCND3-PPP2R5D CCND3 chr6 42016239 - PPP2R5D chr6 42957349 + Exonic hg19 OV TCGA-13-1505-01A 9 4 5'UTR-CDS Intra-chr p21.1 p21.1 Seq+ 38839 ChimerSeq STARFusion TCGA_RNA-Seq GPR110-TRERF1 GPR110 chr6 46993590 - TRERF1 chr6 42204149 - Exonic hg19 OV TCGA-13-1505-01A 8 6 Out-of-frame Intra-chr p21.1 Transcription factor Seq+ 38840 ChimerSeq STARFusion TCGA_RNA-Seq TGFBRAP1-RQCD1 TGFBRAP1 chr2 105912813 - RQCD1 chr2 219447694 + Exonic hg19 OV TCGA-13-1505-01A 7 1 In-Frame Intra-chr q12.2 38841 ChimerSeq STARFusion TCGA_RNA-Seq PEX6-PPP2R5D PEX6 chr6 42946271 - PPP2R5D chr6 42957349 + Exonic hg19 OV TCGA-13-1505-01A 4 5 In-Frame Intra-chr p21.1 p21.1 Seq+ 38842 ChimerSeq STARFusion TCGA_RNA-Seq MTCH2-AGBL2 MTCH2 chr11 47660251 - AGBL2 chr11 47681898 - Exonic hg19 OV TCGA-09-1666-01A 101 3 In-Frame Intra-chr p11.2 p11.2 Seq+ 38843 ChimerSeq STARFusion TCGA_RNA-Seq SARNP-KCNN4 SARNP chr12 56211450 - KCNN4 chr19 44280788 - Exonic hg19 OV TCGA-09-1666-01A 28 0 In-Frame Inter-chr q13.2 q13.31 Seq+ 38844 ChimerSeq STARFusion TCGA_RNA-Seq MKNK2-AP3D1 MKNK2 chr19 2050800 - AP3D1 chr19 2102267 - Exonic hg19 OV TCGA-09-1666-01A 15 0 In-Frame Intra-chr p13.3 p13.3 Seq+ 38845 ChimerSeq STARFusion TCGA_RNA-Seq SARNP-KCNN4 SARNP chr12 56209671 - KCNN4 chr19 44280788 - Exonic hg19 OV TCGA-09-1666-01A 12 0 3'UTR-CDS Inter-chr q13.2 q13.31 Seq+ 38846 ChimerSeq STARFusion TCGA_RNA-Seq RALGAPA2-C10orf137 RALGAPA2 chr20 20453400 - C10orf137 chr10 127451870 + Exonic hg19 OV TCGA-09-1666-01A 11 1 Out-of-frame Inter-chr p11.23 38847 ChimerSeq STARFusion TCGA_RNA-Seq PPFIBP1-SMCO2 PPFIBP1 chr12 27677298 + SMCO2 chr12 27654856 + Exonic hg19 OV TCGA-24-1553-01A 107 17 Out-of-frame Intra-chr p11.23 p11.23 38848 ChimerSeq STARFusion TCGA_RNA-Seq KAT6B-ADK KAT6B chr10 76603236 + ADK chr10 76349040 + Exonic hg19 OV TCGA-24-1553-01A 96 31 In-Frame Intra-chr Oncogene q22.2 Seq+ 38849 ChimerSeq STARFusion TCGA_RNA-Seq SLC34A2-ZCCHC4 SLC34A2 chr4 25657512 + ZCCHC4 chr4 25363481 + Exonic hg19 OV TCGA-24-1553-01A 93 0 5'UTR-CDS Intra-chr p15.2 p15.2 Seq+ 38850 ChimerSeq STARFusion TCGA_RNA-Seq KCNMA1-DLG5 KCNMA1 chr10 79397023 - DLG5 chr10 79584234 - Exonic hg19 OV TCGA-24-1553-01A 68 19 In-Frame Intra-chr q22.3 q22.3 Seq+ 38851 ChimerSeq STARFusion TCGA_RNA-Seq SLC34A2-ZCCHC4 SLC34A2 chr4 25657512 + ZCCHC4 chr4 25351114 + Exonic hg19 OV TCGA-24-1553-01A 65 0 5'UTR-CDS Intra-chr p15.2 p15.2 Seq+ 38852 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-1553-01A 38 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38853 ChimerSeq STARFusion TCGA_RNA-Seq CAMSAP1-KCNT1 CAMSAP1 chr9 138758302 - KCNT1 chr9 138656877 + Exonic hg19 OV TCGA-24-1553-01A 34 11 In-Frame Intra-chr q34.3 q34.3 Seq+ 38854 ChimerSeq STARFusion TCGA_RNA-Seq SAMD12-SNTB1 SAMD12 chr8 119592954 - SNTB1 chr8 121644891 - Exonic hg19 OV TCGA-24-1553-01A 28 5 Out-of-frame Intra-chr q24.12 q24.12 Seq+ 38855 ChimerSeq STARFusion TCGA_RNA-Seq KCNMA1-DLG5 KCNMA1 chr10 79397023 - DLG5 chr10 79556352 - Exonic hg19 OV TCGA-24-1553-01A 19 19 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 38856 ChimerSeq STARFusion TCGA_RNA-Seq FOXK1-RNPEP FOXK1 chr7 4722499 + RNPEP chr1 201958032 + Exonic hg19 OV TCGA-24-1553-01A 22 4 Out-of-frame Inter-chr p22.1 Transcription factor q32.1 Seq+ 38857 ChimerSeq STARFusion TCGA_RNA-Seq RNF19A-SPAG1 RNF19A chr8 101299729 - SPAG1 chr8 101252631 + Exonic hg19 OV TCGA-24-1553-01A 20 6 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 38858 ChimerSeq STARFusion TCGA_RNA-Seq ST14-APLP2 ST14 chr11 130029955 + APLP2 chr11 129979324 + Exonic hg19 OV TCGA-24-1553-01A 17 7 In-Frame Intra-chr q24.3 q24.3 Seq+ 38859 ChimerSeq STARFusion TCGA_RNA-Seq PAN2-MIP PAN2 chr12 56726597 - MIP chr12 56847539 - Exonic hg19 OV TCGA-24-1553-01A 15 5 In-Frame Intra-chr q13.3 q13.3 Seq+ 38860 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-DSCAM ZFAND3 chr6 37787792 + DSCAM chr21 41741172 - Exonic hg19 OV TCGA-24-1553-01A 14 1 Out-of-frame Inter-chr p21.2 q22.2 Seq+ 38861 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-24-1553-01A 13 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38862 ChimerSeq STARFusion TCGA_RNA-Seq DDX27-IGL@ DDX27 chr20 47860496 + IGL@ chr22 23247171 + Exonic hg19 OV TCGA-24-1553-01A 12 0 Out-of-frame Inter-chr q13.13 q11.22 38863 ChimerSeq STARFusion TCGA_RNA-Seq DDX27-IGLC3 DDX27 chr20 47860496 + IGLC3 chr22 23247171 + Exonic hg19 OV TCGA-24-1553-01A 12 0 Out-of-frame Inter-chr q13.13 q11.22 38864 ChimerSeq STARFusion TCGA_RNA-Seq DDX27-IGLJ3 DDX27 chr20 47860496 + IGLJ3 chr22 23247171 + Exonic hg19 OV TCGA-24-1553-01A 12 0 Out-of-frame Inter-chr q13.13 q11.22 38865 ChimerSeq STARFusion TCGA_RNA-Seq ASH1L-C1orf87 ASH1L chr1 155349834 - C1orf87 chr1 60521110 - Exonic hg19 OV TCGA-24-1553-01A 10 7 Out-of-frame Intra-chr q22 Transcription factor p32.1 Seq+ 38866 ChimerSeq STARFusion TCGA_RNA-Seq PRRX2-PPP2R4 PRRX2 chr9 132428405 + PPP2R4 chr9 131882792 + Exonic hg19 OV TCGA-24-1553-01A 10 6 In-Frame Intra-chr q34.11 Transcription factor Tumor suppressor gene Seq+ 38867 ChimerSeq STARFusion TCGA_RNA-Seq RNF149-MAP4K4 RNF149 chr2 101910476 - MAP4K4 chr2 102407182 + Exonic hg19 OV TCGA-24-1553-01A 11 1 In-Frame Intra-chr q11.2 q11.2 Seq+ 38868 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0907-SMG5 KIAA0907 chr1 155903424 - SMG5 chr1 156242189 - Exonic hg19 OV TCGA-24-1553-01A 8 7 Out-of-frame Intra-chr q22 q22 Seq+ 38869 ChimerSeq STARFusion TCGA_RNA-Seq RPL13AP5-CD74 RPL13AP5 chr10 98510501 + CD74 chr5 149792313 - Exonic hg19 OV TCGA-24-1553-01A 6 7 Out-of-frame Inter-chr q24.1 q33.1 38870 ChimerSeq STARFusion TCGA_RNA-Seq RNF19A-SPAG1 RNF19A chr8 101299729 - SPAG1 chr8 101245639 + Exonic hg19 OV TCGA-24-1553-01A 6 6 In-Frame Intra-chr q22.2 q22.2 Seq+ 38871 ChimerSeq STARFusion TCGA_RNA-Seq PRMT1-PTOV1 PRMT1 chr19 50183845 + PTOV1 chr19 50361806 + Exonic hg19 OV TCGA-23-1120-01A 227 57 In-Frame Intra-chr q13.33 q13.33 Seq+ 38872 ChimerSeq STARFusion TCGA_RNA-Seq RBCK1-MYO18A RBCK1 chr20 389423 + MYO18A chr17 27401932 - Exonic hg19 OV TCGA-23-1120-01A 203 63 In-Frame Inter-chr p13 Transcription factor q11.2 Oncogene Seq+ 38873 ChimerSeq STARFusion TCGA_RNA-Seq RBCK1-TIAF1 RBCK1 chr20 389423 + TIAF1 chr17 27401932 - Exonic hg19 OV TCGA-23-1120-01A 203 63 CDS-5'UTR Inter-chr p13 Transcription factor q11.2 Oncogene Seq+ 38874 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-23-1120-01A 81 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38875 ChimerSeq STARFusion TCGA_RNA-Seq RPL35A-LPP RPL35A chr3 197681018 + LPP chr3 188202380 + Exonic hg19 OV TCGA-23-1120-01A 56 28 Out-of-frame Intra-chr q29 q27.3 Oncogene Seq+ 38876 ChimerSeq STARFusion TCGA_RNA-Seq LPP-CASR LPP chr3 188202492 + CASR chr3 121972795 + Exonic hg19 OV TCGA-23-1120-01A 45 7 CDS-5'UTR Intra-chr q27.3 Oncogene q13.33 Seq+ 38877 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-23-1120-01A 35 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38878 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-23-1120-01A 29 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38879 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069803 - Exonic hg19 OV TCGA-23-1120-01A 28 0 Out-of-frame Inter-chr q12.3 q32.2 38880 ChimerSeq STARFusion TCGA_RNA-Seq SOGA1-SAMHD1 SOGA1 chr20 35421652 - SAMHD1 chr20 35532652 - Exonic hg19 OV TCGA-23-1120-01A 24 12 In-Frame Intra-chr q11.23 q11.23 Seq+ 38881 ChimerSeq STARFusion TCGA_RNA-Seq SCAP-ELP6 SCAP chr3 47517289 - ELP6 chr3 47552716 - Exonic hg19 OV TCGA-23-1120-01A 13 1 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 38882 ChimerSeq STARFusion TCGA_RNA-Seq SOGA1-SAMHD1 SOGA1 chr20 35412288 - SAMHD1 chr20 35532652 - Exonic hg19 OV TCGA-23-1120-01A 9 12 3'UTR-CDS Intra-chr q11.23 q11.23 Seq+ 38883 ChimerSeq STARFusion TCGA_RNA-Seq SOGA1-SAMHD1 SOGA1 chr20 35407338 - SAMHD1 chr20 35533826 - Exonic hg19 OV TCGA-23-1120-01A 6 12 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 38884 ChimerSeq STARFusion TCGA_RNA-Seq WIBG-SARNP WIBG chr12 56321509 - SARNP chr12 56184376 - Exonic hg19 OV TCGA-29-1698-01A 34 5 In-Frame Intra-chr 12q13.2 q13.2 38885 ChimerSeq STARFusion TCGA_RNA-Seq EPPK1-ZC3H3 EPPK1 chr8 144940235 - ZC3H3 chr8 144590069 - Exonic hg19 OV TCGA-29-1698-01A 19 6 In-Frame Intra-chr q24.3 Seq+ 38886 ChimerSeq STARFusion TCGA_RNA-Seq WIBG-SARNP WIBG chr12 56320860 - SARNP chr12 56184376 - Exonic hg19 OV TCGA-29-1698-01A 17 5 In-Frame Intra-chr 12q13.2 q13.2 38887 ChimerSeq STARFusion TCGA_RNA-Seq DCDC2-GPLD1 DCDC2 chr6 24301943 - GPLD1 chr6 24429346 - Exonic hg19 OV TCGA-29-1698-01A 15 3 Out-of-frame Intra-chr p22.3 Tumor suppressor gene p22.3 Seq+ 38888 ChimerSeq STARFusion TCGA_RNA-Seq WIBG-SARNP WIBG chr12 56308060 - SARNP chr12 56184376 - Exonic hg19 OV TCGA-29-1698-01A 12 5 CDS-3'UTR Intra-chr 12q13.2 q13.2 38889 ChimerSeq STARFusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2017357 - COL1A1 chr17 48264067 - Exonic hg19 OV TCGA-29-1698-01A 6 25 Out-of-frame Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 38890 ChimerSeq STARFusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018440 - COL1A1 chr17 48264902 - Exonic hg19 OV TCGA-29-1698-01A 3 24 Out-of-frame Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 38891 ChimerSeq STARFusion TCGA_RNA-Seq SPATS2-TUBA1A SPATS2 chr12 49854820 + TUBA1A chr12 49580616 - Exonic hg19 OV TCGA-13-0804-01A 6 1 Out-of-frame Intra-chr q13.12 q13.12 38892 ChimerSeq STARFusion TCGA_RNA-Seq EMID1-KREMEN1 EMID1 chr22 29630338 + KREMEN1 chr22 29550457 + Exonic hg19 OV TCGA-04-1341-01A 507 167 CDS-3'UTR Intra-chr q12.2 q12.1 Seq+ 38893 ChimerSeq STARFusion TCGA_RNA-Seq EMID1-CBY1 EMID1 chr22 29630338 + CBY1 chr22 39069164 + Exonic hg19 OV TCGA-04-1341-01A 362 117 In-Frame Intra-chr q12.2 q13.1 Seq+ 38894 ChimerSeq STARFusion TCGA_RNA-Seq RNF11-C8A RNF11 chr1 51702551 + C8A chr1 57347118 + Exonic hg19 OV TCGA-04-1341-01A 181 75 Out-of-frame Intra-chr p32.3 p32.2 Seq+ 38895 ChimerSeq STARFusion TCGA_RNA-Seq ZNF680-INTS4L1 ZNF680 chr7 64023303 - INTS4L1 chr7 64691919 + Exonic hg19 OV TCGA-04-1341-01A 168 21 CDS-5'UTR Intra-chr q11.21 Transcription factor Seq+ 38896 ChimerSeq STARFusion TCGA_RNA-Seq RNF11-C8A RNF11 chr1 51702551 + C8A chr1 57349154 + Exonic hg19 OV TCGA-04-1341-01A 139 71 In-Frame Intra-chr p32.3 p32.2 Seq+ 38897 ChimerSeq STARFusion TCGA_RNA-Seq ZNF680-INTS4L1 ZNF680 chr7 64023303 - INTS4L1 chr7 64693443 + Exonic hg19 OV TCGA-04-1341-01A 23 21 CDS-5'UTR Intra-chr q11.21 Transcription factor Seq+ 38898 ChimerSeq STARFusion TCGA_RNA-Seq CDC20-RRAGC CDC20 chr1 43826916 + RRAGC chr1 39311759 - Exonic hg19 OV TCGA-04-1341-01A 19 1 5'UTR-CDS Intra-chr p34.2 p34.3 Seq+ 38899 ChimerSeq STARFusion TCGA_RNA-Seq RPL41-IGFBP2 RPL41 chr12 56510582 + IGFBP2 chr2 217498140 + Exonic hg19 OV TCGA-04-1341-01A 18 0 Out-of-frame Inter-chr q13.2 q35 38900 ChimerSeq STARFusion TCGA_RNA-Seq RPS26-ZRSR1 RPS26 chr12 56438001 + ZRSR1 chr5 112228788 + Exonic hg19 OV TCGA-04-1341-01A 17 0 Out-of-frame Inter-chr q13.2 q22.2 38901 ChimerSeq STARFusion TCGA_RNA-Seq C11orf30-CAPN5 C11orf30 chr11 76239510 + CAPN5 chr11 76795898 + Exonic hg19 OV TCGA-04-1341-01A 15 6 CDS-5'UTR Intra-chr q13.5 Seq+ 38902 ChimerSeq STARFusion TCGA_RNA-Seq RAB7A-CHCHD6 RAB7A chr3 128445202 + CHCHD6 chr3 126571490 + Exonic hg19 OV TCGA-31-1953-01A 75 11 5'UTR-CDS Intra-chr q21.3 Tumor suppressor gene q21.3 Seq+ 38903 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-31-1953-01A 61 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38904 ChimerSeq STARFusion TCGA_RNA-Seq DVL1-ITPA DVL1 chr1 1273357 - ITPA chr20 3202487 + Exonic hg19 OV TCGA-31-1953-01A 45 13 Out-of-frame Inter-chr p36.33 p13 Seq+ 38905 ChimerSeq STARFusion TCGA_RNA-Seq ASXL1-HCK ASXL1 chr20 30946635 + HCK chr20 30659465 + Exonic hg19 OV TCGA-31-1953-01A 30 9 Out-of-frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 TK:Src Seq+ 38906 ChimerSeq STARFusion TCGA_RNA-Seq VHL-CPNE9 VHL chr3 10183871 + CPNE9 chr3 9767633 + Exonic hg19 OV TCGA-31-1953-01A 18 0 Out-of-frame Intra-chr p25.3 Oncogene Tumor suppressor gene p25.3 Seq+ 38907 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-31-1953-01A 15 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38908 ChimerSeq STARFusion TCGA_RNA-Seq LTBR-ITFG2 LTBR chr12 6494545 + ITFG2 chr12 2926389 + Exonic hg19 OV TCGA-31-1953-01A 12 2 Out-of-frame Intra-chr p13.31 p13.33 Seq+ 38909 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-31-1953-01A 11 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38910 ChimerSeq STARFusion TCGA_RNA-Seq VHL-CPNE9 VHL chr3 10183871 + CPNE9 chr3 9771191 + Exonic hg19 OV TCGA-31-1953-01A 11 0 Out-of-frame Intra-chr p25.3 Oncogene Tumor suppressor gene p25.3 Seq+ 38911 ChimerSeq STARFusion TCGA_RNA-Seq ST5-TMEM9B ST5 chr11 8772168 - TMEM9B chr11 8977845 - Exonic hg19 OV TCGA-31-1953-01A 10 3 In-Frame Intra-chr p15.4 Tumor suppressor gene p15.4 Seq+ 38912 ChimerSeq STARFusion TCGA_RNA-Seq STAMBP-SPR STAMBP chr2 74058186 + SPR chr2 73115549 + Exonic hg19 OV TCGA-31-1953-01A 10 3 Out-of-frame Intra-chr p13.1 p13.2 Seq+ 38913 ChimerSeq STARFusion TCGA_RNA-Seq PRRX2-LINC00963 PRRX2 chr9 132428405 + LINC00963 chr9 132265602 + Exonic hg19 OV TCGA-31-1953-01A 9 5 Out-of-frame Intra-chr q34.11 Transcription factor q34.11 38914 ChimerSeq STARFusion TCGA_RNA-Seq ASXL1-HCK ASXL1 chr20 30946635 + HCK chr20 30642019 + Exonic hg19 OV TCGA-31-1953-01A 7 9 CDS-5'UTR Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 TK:Src Seq+ 38915 ChimerSeq STARFusion TCGA_RNA-Seq PRRX2-LINC00963 PRRX2 chr9 132428405 + LINC00963 chr9 132251488 + Exonic hg19 OV TCGA-31-1953-01A 8 5 Out-of-frame Intra-chr q34.11 Transcription factor q34.11 38916 ChimerSeq STARFusion TCGA_RNA-Seq APBB3-TMEM163 APBB3 chr5 139973238 - TMEM163 chr2 135309662 - Exonic hg19 OV TCGA-31-1953-01A 8 4 5'UTR-CDS Inter-chr q31.3 q21.3 38917 ChimerSeq STARFusion TCGA_RNA-Seq ST5-TMEM9B ST5 chr11 8772168 - TMEM9B chr11 8983730 - Exonic hg19 OV TCGA-31-1953-01A 8 3 Out-of-frame Intra-chr p15.4 Tumor suppressor gene p15.4 Seq+ 38918 ChimerSeq STARFusion TCGA_RNA-Seq STAMBP-SPR STAMBP chr2 74058186 + SPR chr2 73115443 + Exonic hg19 OV TCGA-31-1953-01A 8 3 Out-of-frame Intra-chr p13.1 p13.2 Seq+ 38919 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-25-1625-01A 76 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38920 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-RSBN1L PTPN12 chr7 77256992 + RSBN1L chr7 77378741 + Exonic hg19 OV TCGA-25-1625-01A 38 12 In-Frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 38921 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-25-1625-01A 18 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38922 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-13-0884-01B 36 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38923 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-13-0884-01B 31 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38924 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-13-0884-01B 26 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38925 ChimerSeq STARFusion TCGA_RNA-Seq TNKS-KHDRBS3 TNKS chr8 9622300 + KHDRBS3 chr8 136619198 + Exonic hg19 OV TCGA-13-0884-01B 22 9 In-Frame Intra-chr p23.1 q24.23 Seq+ 38926 ChimerSeq STARFusion TCGA_RNA-Seq LPHN1-C19orf43 LPHN1 chr19 14316797 - C19orf43 chr19 12842235 - Exonic hg19 OV TCGA-04-1350-01A 34 0 5'UTR-CDS Intra-chr p13.13 Seq+ 38927 ChimerSeq STARFusion TCGA_RNA-Seq HSH2D-CIB3 HSH2D chr19 16259685 + CIB3 chr19 16280552 - Exonic hg19 OV TCGA-04-1350-01A 7 3 In-Frame Intra-chr p13.11 p13.11 Seq+ 38928 ChimerSeq STARFusion TCGA_RNA-Seq FKBP8-DAND5 FKBP8 chr19 18654295 - DAND5 chr19 13084204 + Exonic hg19 OV TCGA-13-0800-01A 91 35 Out-of-frame Intra-chr p13.11 p13.13 Seq+ 38929 ChimerSeq STARFusion TCGA_RNA-Seq ZNF227-PDCD5 ZNF227 chr19 44716738 + PDCD5 chr19 33073101 + Exonic hg19 OV TCGA-13-0800-01A 46 0 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.11 Tumor suppressor gene Seq+ 38930 ChimerSeq STARFusion TCGA_RNA-Seq TNPO2-ASNA1 TNPO2 chr19 12834063 - ASNA1 chr19 12858011 + Exonic hg19 OV TCGA-13-0800-01A 33 17 5'UTR-CDS Intra-chr p13.13 p13.13 Seq+ 38931 ChimerSeq STARFusion TCGA_RNA-Seq TNPO2-ASNA1 TNPO2 chr19 12833291 - ASNA1 chr19 12858011 + Exonic hg19 OV TCGA-13-0800-01A 31 17 5'UTR-CDS Intra-chr p13.13 p13.13 Seq+ 38932 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734942 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-13-0800-01A 34 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38933 ChimerSeq STARFusion TCGA_RNA-Seq AK9-PDSS2 AK9 chr6 110011675 - PDSS2 chr6 107595431 - Exonic hg19 OV TCGA-13-0800-01A 27 4 Out-of-frame Intra-chr q21 q21 Tumor suppressor gene Seq+ 38934 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-13-0800-01A 9 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38935 ChimerSeq STARFusion TCGA_RNA-Seq AK9-PDSS2 AK9 chr6 110012350 - PDSS2 chr6 107595431 - Exonic hg19 OV TCGA-13-0800-01A 7 4 Out-of-frame Intra-chr q21 q21 Tumor suppressor gene Seq+ 38936 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-13-0800-01A 8 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38937 ChimerSeq STARFusion TCGA_RNA-Seq TNPO2-BEST2 TNPO2 chr19 12834063 - BEST2 chr19 12862485 + Exonic hg19 OV TCGA-13-0800-01A 8 0 5'UTR-5'UTR Intra-chr p13.13 p13.13 38938 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF1-ASB6 RAPGEF1 chr9 134525516 - ASB6 chr9 132403001 - Exonic hg19 OV TCGA-30-1855-01A 69 8 Out-of-frame Intra-chr q34.13 q34.11 38939 ChimerSeq STARFusion TCGA_RNA-Seq GGA3-NUP85 GGA3 chr17 73257629 - NUP85 chr17 73230732 + Exonic hg19 OV TCGA-30-1855-01A 33 3 In-Frame Intra-chr q25.1 q25.1 Seq+ 38940 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF1-ASB6 RAPGEF1 chr9 134526197 - ASB6 chr9 132403001 - Exonic hg19 OV TCGA-30-1855-01A 25 8 Out-of-frame Intra-chr q34.13 q34.11 38941 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-30-1855-01A 15 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38942 ChimerSeq STARFusion TCGA_RNA-Seq GGA3-NUP85 GGA3 chr17 73257629 - NUP85 chr17 73231195 + Exonic hg19 OV TCGA-30-1855-01A 14 3 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 38943 ChimerSeq STARFusion TCGA_RNA-Seq MSLN-FAM195A MSLN chr16 811174 + FAM195A chr16 697417 + Exonic hg19 OV TCGA-29-1711-01A 133 35 5'UTR-CDS Intra-chr p13.3 38944 ChimerSeq STARFusion TCGA_RNA-Seq MSLN-FAM195A MSLN chr16 812765 + FAM195A chr16 697417 + Exonic hg19 OV TCGA-29-1711-01A 43 35 Out-of-frame Intra-chr p13.3 38945 ChimerSeq STARFusion TCGA_RNA-Seq NSRP1-SLC6A13 NSRP1 chr17 28443881 + SLC6A13 chr12 347176 - Exonic hg19 OV TCGA-29-1711-01A 48 7 Out-of-frame Inter-chr q11.2 p13.33 Seq+ 38946 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-29-1711-01A 38 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38947 ChimerSeq STARFusion TCGA_RNA-Seq MSLN-FAM195A MSLN chr16 811174 + FAM195A chr16 696472 + Exonic hg19 OV TCGA-29-1711-01A 29 35 5'UTR-CDS Intra-chr p13.3 38948 ChimerSeq STARFusion TCGA_RNA-Seq MSLN-FAM195A MSLN chr16 812765 + FAM195A chr16 696472 + Exonic hg19 OV TCGA-29-1711-01A 25 35 Out-of-frame Intra-chr p13.3 38949 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-29-1711-01A 31 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 38950 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-29-1711-01A 31 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38951 ChimerSeq STARFusion TCGA_RNA-Seq CUL5-ELMOD1 CUL5 chr11 107925682 + ELMOD1 chr11 107518194 + Exonic hg19 OV TCGA-29-1711-01A 19 4 In-Frame Intra-chr q22.3 Tumor suppressor gene q22.3 Seq+ 38952 ChimerSeq STARFusion TCGA_RNA-Seq TMEM79-SMG5 TMEM79 chr1 156255546 + SMG5 chr1 156219070 - Exonic hg19 OV TCGA-29-1711-01A 20 0 Out-of-frame Intra-chr q22 q22 Seq+ 38953 ChimerSeq STARFusion TCGA_RNA-Seq STT3B-MUC1 STT3B chr3 31574521 + MUC1 chr1 155161150 - Exonic hg19 OV TCGA-29-1711-01A 15 1 Out-of-frame Inter-chr p23 q22 Oncogene 38954 ChimerSeq STARFusion TCGA_RNA-Seq PRPF6-DCAF5 PRPF6 chr20 62616378 + DCAF5 chr14 69529228 - Exonic hg19 OV TCGA-29-1711-01A 11 5 Out-of-frame Inter-chr q13.33 q24.1 Seq+ 38955 ChimerSeq STARFusion TCGA_RNA-Seq TANC1-RINL TANC1 chr2 159954346 + RINL chr19 39362510 - Exonic hg19 OV TCGA-29-1711-01A 10 2 In-Frame Inter-chr q24.2 Seq+ 38956 ChimerSeq STARFusion TCGA_RNA-Seq GPRIN2-TIMM23 GPRIN2 chr10 46995032 + TIMM23 chr10 51607098 - Exonic hg19 OV TCGA-29-1711-01A 6 4 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 38957 ChimerSeq STARFusion TCGA_RNA-Seq COL14A1-DEPTOR COL14A1 chr8 121137579 + DEPTOR chr8 121061815 + Exonic hg19 OV TCGA-29-1711-01A 6 2 5'UTR-CDS Intra-chr q24.12 q24.12 Seq+ 38958 ChimerSeq STARFusion TCGA_RNA-Seq FRMD8-POLA2 FRMD8 chr11 65168338 + POLA2 chr11 65061624 + Exonic hg19 OV TCGA-29-1711-01A 3 5 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 38959 ChimerSeq STARFusion TCGA_RNA-Seq PRPF6-DCAF5 PRPF6 chr20 62616378 + DCAF5 chr14 69522328 - Exonic hg19 OV TCGA-29-1711-01A 2 5 Out-of-frame Inter-chr q13.33 q24.1 Seq+ 38960 ChimerSeq STARFusion TCGA_RNA-Seq CARM1-C19orf38 CARM1 chr19 10982598 + C19orf38 chr19 10973846 + Exonic hg19 OV TCGA-24-1548-01A 126 89 In-Frame Intra-chr p13.2 p13.2 Seq+ 38961 ChimerSeq STARFusion TCGA_RNA-Seq PGK1-ATP7A PGK1 chrX 77365414 + ATP7A chrX 77294334 + Exonic hg19 OV TCGA-24-1548-01A 92 14 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 38962 ChimerSeq STARFusion TCGA_RNA-Seq CARM1-C19orf38 CARM1 chr19 10982598 + C19orf38 chr19 10979894 + Exonic hg19 OV TCGA-24-1548-01A 23 86 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 38963 ChimerSeq STARFusion TCGA_RNA-Seq SGK3-DNAJC5B SGK3 chr8 67710860 + DNAJC5B chr8 66992612 + Exonic hg19 OV TCGA-24-1548-01A 33 18 In-Frame Intra-chr q13.1 AGC:SGK q13.1 Seq+ 38964 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-1548-01A 16 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38965 ChimerSeq STARFusion TCGA_RNA-Seq RIPK1-SERPINB9 RIPK1 chr6 3064293 + SERPINB9 chr6 2900855 - Exonic hg19 OV TCGA-61-2110-01A 19 0 5'UTR-5'UTR Intra-chr p25.2 TKL:RIPK p25.2 38966 ChimerSeq STARFusion TCGA_RNA-Seq STAG1-ZNF148 STAG1 chr3 136471037 - ZNF148 chr3 124953173 - Exonic hg19 OV TCGA-61-2110-01A 15 0 5'UTR-CDS Intra-chr q22.3 q21.2 Transcription factor Seq+ 38967 ChimerSeq STARFusion TCGA_RNA-Seq GPC1-RPL28 GPC1 chr2 241392439 + RPL28 chr19 55897716 + Exonic hg19 OV TCGA-29-1768-01A 15 0 Out-of-frame Inter-chr q37.3 q13.42 38968 ChimerSeq STARFusion TCGA_RNA-Seq CBFA2T2-COMMD7 CBFA2T2 chr20 32078107 + COMMD7 chr20 31294562 - Exonic hg19 OV TCGA-29-1768-01A 14 3 In-Frame Intra-chr q11.21 q11.21 Seq+ 38969 ChimerSeq STARFusion TCGA_RNA-Seq TPM4-RPL18A TPM4 chr19 16199930 + RPL18A chr19 17972102 + Exonic hg19 OV TCGA-20-0991-01A 1002 305 In-Frame Intra-chr p13.12 p13.11 Seq+ 38970 ChimerSeq STARFusion TCGA_RNA-Seq CANX-SQSTM1 CANX chr5 179137066 + SQSTM1 chr5 179260032 + Exonic hg19 OV TCGA-20-0991-01A 71 15 In-Frame Intra-chr q35.3 38971 ChimerSeq STARFusion TCGA_RNA-Seq RLF-EBNA1BP2 RLF chr1 40688382 + EBNA1BP2 chr1 43727589 - Exonic hg19 OV TCGA-20-0991-01A 37 12 CDS-5'UTR Intra-chr p34.2 Transcription factor p34.2 Seq+ 38972 ChimerSeq STARFusion TCGA_RNA-Seq CBFA2T2-TOX2 CBFA2T2 chr20 32078107 + TOX2 chr20 42679946 + Exonic hg19 OV TCGA-20-0991-01A 32 3 Out-of-frame Intra-chr q11.21 q13.12 Seq+ 38973 ChimerSeq STARFusion TCGA_RNA-Seq HUWE1-CLCN5 HUWE1 chrX 53600710 - CLCN5 chrX 49806925 + Exonic hg19 OV TCGA-20-0991-01A 15 9 Out-of-frame Intra-chr p11.22 p11.23 Seq+ 38974 ChimerSeq STARFusion TCGA_RNA-Seq EYA2-SERINC3 EYA2 chr20 45644936 + SERINC3 chr20 43142681 - Exonic hg19 OV TCGA-20-0991-01A 9 9 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 38975 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-20-0991-01A 9 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 38976 ChimerSeq STARFusion TCGA_RNA-Seq RLF-EBNA1BP2 RLF chr1 40688382 + EBNA1BP2 chr1 43681064 - Exonic hg19 OV TCGA-20-0991-01A 5 11 CDS-5'UTR Intra-chr p34.2 Transcription factor p34.2 Seq+ 38977 ChimerSeq STARFusion TCGA_RNA-Seq EYA2-SERINC3 EYA2 chr20 45633723 + SERINC3 chr20 43142681 - Exonic hg19 OV TCGA-20-0991-01A 3 9 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 38978 ChimerSeq STARFusion TCGA_RNA-Seq C4B-MSH5 C4B chr6 31984923 + MSH5 chr6 31732213 + Exonic hg19 OV TCGA-36-1581-01A 52 16 CDS-3'UTR Intra-chr 38979 ChimerSeq STARFusion TCGA_RNA-Seq C4B-SAPCD1 C4B chr6 31984923 + SAPCD1 chr6 31732213 + Exonic hg19 OV TCGA-36-1581-01A 52 14 Out-of-frame Intra-chr 38980 ChimerSeq STARFusion TCGA_RNA-Seq PITPNA-PRPF8 PITPNA chr17 1444860 - PRPF8 chr17 1565447 - Exonic hg19 OV TCGA-36-1581-01A 45 19 In-Frame Intra-chr p13.3 Seq+ 38981 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-WWP2 NFAT5 chr16 69600277 + WWP2 chr16 69874029 + Exonic hg19 OV TCGA-36-1581-01A 28 11 In-Frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 38982 ChimerSeq STARFusion TCGA_RNA-Seq PPP1CB-PLB1 PPP1CB chr2 28975042 + PLB1 chr2 28739675 + Exonic hg19 OV TCGA-36-1581-01A 16 3 In-Frame Intra-chr p23.2 p23.2 Seq+ 38983 ChimerSeq STARFusion TCGA_RNA-Seq UBE2D2-OR7A5 UBE2D2 chr5 138980020 + OR7A5 chr19 14911576 - Exonic hg19 OV TCGA-36-1581-01A 15 2 CDS-3'UTR Inter-chr q31.2 p13.12 Seq+ 38984 ChimerSeq STARFusion TCGA_RNA-Seq CAPZB-TMCO4 CAPZB chr1 19811930 - TMCO4 chr1 20027378 - Exonic hg19 OV TCGA-36-1581-01A 12 12 Out-of-frame Intra-chr p36.13 p36.13 Seq+ 38985 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106209411 - Exonic hg19 OV TCGA-36-1581-01A 14 0 Out-of-frame Inter-chr q21.2 32.33 38986 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076851 + IGHG1 chr14 106209411 - Exonic hg19 OV TCGA-36-1581-01A 14 0 Out-of-frame Inter-chr q21.2 q32.33 38987 ChimerSeq STARFusion TCGA_RNA-Seq LIN54-TMEM150C LIN54 chr4 83933945 - TMEM150C chr4 83425820 - Exonic hg19 OV TCGA-36-1581-01A 10 14 5'UTR-5'UTR Intra-chr q21.22 Transcription factor q21.22 38988 ChimerSeq STARFusion TCGA_RNA-Seq GTPBP10-CDK14 GTPBP10 chr7 90003668 + CDK14 chr7 90836480 + Exonic hg19 OV TCGA-36-1581-01A 11 8 CDS-3'UTR Intra-chr q21.13 q21.13 Seq+ 38989 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-WWP2 NFAT5 chr16 69602451 + WWP2 chr16 69874029 + Exonic hg19 OV TCGA-36-1581-01A 10 11 In-Frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 38990 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH1-LCN15 NOTCH1 chr9 139438476 - LCN15 chr9 139658417 - Exonic hg19 OV TCGA-36-1581-01A 9 3 Out-of-frame Intra-chr q34.3 Oncogene Tumor suppressor gene q34.3 Seq+ 38991 ChimerSeq STARFusion TCGA_RNA-Seq ABL1-FUBP3 ABL1 chr9 133589842 + FUBP3 chr9 133498998 + Exonic hg19 OV TCGA-36-1581-01A 8 4 In-Frame Intra-chr q34.12 TK:Abl Oncogene q34.11 Seq+ 38992 ChimerSeq STARFusion TCGA_RNA-Seq LIN54-TMEM150C LIN54 chr4 83931637 - TMEM150C chr4 83425820 - Exonic hg19 OV TCGA-36-1581-01A 3 14 5'UTR-5'UTR Intra-chr q21.22 Transcription factor q21.22 38993 ChimerSeq STARFusion TCGA_RNA-Seq G2E3-AP4S1 G2E3 chr14 31028478 + AP4S1 chr14 31535332 + Exonic hg19 OV TCGA-36-1581-01A 3 11 5'UTR-5'UTR Intra-chr q12 q12 Seq+ 38994 ChimerSeq STARFusion TCGA_RNA-Seq BRSK1-COX6B1 BRSK1 chr19 55816954 + COX6B1 chr19 36149496 + Exonic hg19 OV TCGA-24-1544-01A 101 23 In-Frame Intra-chr q13.42 CAMK:CAMKL Tumor suppressor gene q13.12 Seq+ 38995 ChimerSeq STARFusion TCGA_RNA-Seq RHPN2-GRIN2D RHPN2 chr19 33481420 - GRIN2D chr19 48919259 + Exonic hg19 OV TCGA-24-1544-01A 79 17 In-Frame Intra-chr q13.11 q13.33 Seq+ 38996 ChimerSeq STARFusion TCGA_RNA-Seq AGAP1-PINX1 AGAP1 chr2 236403493 + PINX1 chr8 10683754 - Exonic hg19 OV TCGA-24-1544-01A 36 4 In-Frame Inter-chr q37.2 p23.1 Tumor suppressor gene Seq+ 38997 ChimerSeq STARFusion TCGA_RNA-Seq AGAP1-SOX7 AGAP1 chr2 236403493 + SOX7 chr8 10683754 - Exonic hg19 OV TCGA-24-1544-01A 36 4 CDS-5'UTR Inter-chr q37.2 p23.1 Tumor suppressor gene Transcription factor 38998 ChimerSeq STARFusion TCGA_RNA-Seq AGAP1-SOX7 AGAP1 chr2 236403493 + SOX7 chr8 10683754 - Exonic hg19 OV TCGA-24-1544-01A 35 4 CDS-5'UTR Inter-chr q37.2 p23.1 Tumor suppressor gene Transcription factor 38999 ChimerSeq STARFusion TCGA_RNA-Seq THRAP3-AGO1 THRAP3 chr1 36690106 + AGO1 chr1 36367075 + Exonic hg19 OV TCGA-24-1544-01A 10 2 Out-of-frame Intra-chr p34.3 p34.3 39000 ChimerSeq STARFusion TCGA_RNA-Seq PAK4-ZNF837 PAK4 chr19 39616559 + ZNF837 chr19 58881295 - Exonic hg19 OV TCGA-24-1544-01A 6 3 5'UTR-5'UTR Intra-chr q13.2 STE:STE20 q13.43 Transcription factor Seq+ 39001 ChimerSeq STARFusion TCGA_RNA-Seq MUC16-ZC3H4 MUC16 chr19 9072451 - ZC3H4 chr19 47568759 - Exonic hg19 OV TCGA-23-1032-01A 368 109 Out-of-frame Intra-chr p13.2 q13.32 Seq+ 39002 ChimerSeq STARFusion TCGA_RNA-Seq PCBP2-TIMELESS PCBP2 chr12 53854443 + TIMELESS chr12 56824088 - Exonic hg19 OV TCGA-23-1032-01A 69 3 Out-of-frame Intra-chr q13.13 q13.3 Seq+ 39003 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP39-ZNF250 ARHGAP39 chr8 145911071 - ZNF250 chr8 146076780 - Exonic hg19 OV TCGA-23-1032-01A 41 15 Out-of-frame Intra-chr q24.3 q24.3 Transcription factor 39004 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP39-COMMD5 ARHGAP39 chr8 145911071 - COMMD5 chr8 146076780 - Exonic hg19 OV TCGA-23-1032-01A 41 14 5'UTR-5'UTR Intra-chr q24.3 q24.3 39005 ChimerSeq STARFusion TCGA_RNA-Seq HPN-ABCG1 HPN chr19 35540420 + ABCG1 chr21 43704670 + Exonic hg19 OV TCGA-23-1032-01A 26 14 Out-of-frame Inter-chr q13.11 q22.3 Seq+ 39006 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN17-SFXN1 TSPAN17 chr5 176083957 + SFXN1 chr5 174938454 + Exonic hg19 OV TCGA-23-1032-01A 24 12 In-Frame Intra-chr q35.2 q35.2 Seq+ 39007 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-23-1032-01A 25 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39008 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-23-1032-01A 23 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39009 ChimerSeq STARFusion TCGA_RNA-Seq PPP2CB-PURG PPP2CB chr8 30669836 - PURG chr8 30854213 - Exonic hg19 OV TCGA-23-1032-01A 15 10 In-Frame Intra-chr p12 Tumor suppressor gene p12 Transcription factor Seq+ 39010 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP39-ZNF250 ARHGAP39 chr8 145911071 - ZNF250 chr8 146093508 - Exonic hg19 OV TCGA-23-1032-01A 11 15 Out-of-frame Intra-chr q24.3 q24.3 Transcription factor 39011 ChimerSeq STARFusion TCGA_RNA-Seq CIAO1-TMEM127 CIAO1 chr2 96932227 + TMEM127 chr2 96920735 - Exonic hg19 OV TCGA-WR-A838-01A 126 26 In-Frame Intra-chr q11.2 q11.2 Tumor suppressor gene Seq+ 39012 ChimerSeq STARFusion TCGA_RNA-Seq HYDIN-FAM91A1 HYDIN chr16 71163543 - FAM91A1 chr8 124786320 + Exonic hg19 OV TCGA-WR-A838-01A 9 1 In-Frame Inter-chr q24.13 39013 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821633 - Exonic hg19 OV TCGA-09-1661-01B 8 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39014 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069803 - Exonic hg19 OV TCGA-09-1661-01B 7 0 Out-of-frame Inter-chr q12.3 q32.2 39015 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB1-EPS15L1 DNAJB1 chr19 14628951 - EPS15L1 chr19 16472795 - Exonic hg19 OV TCGA-04-1519-01A 200 150 In-Frame Intra-chr p13.12 Tumor suppressor gene p13.11 Seq+ 39016 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB1-EPS15L1 DNAJB1 chr19 14628951 - EPS15L1 chr19 16466662 - Exonic hg19 OV TCGA-04-1519-01A 52 139 Out-of-frame Intra-chr p13.12 Tumor suppressor gene p13.11 Seq+ 39017 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821632 - Exonic hg19 OV TCGA-04-1519-01A 37 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39018 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-04-1519-01A 15 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 39019 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821634 - Exonic hg19 OV TCGA-04-1519-01A 11 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39020 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-04-1519-01A 11 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39021 ChimerSeq STARFusion TCGA_RNA-Seq FGFRL1-IGF2 FGFRL1 chr4 1020073 + IGF2 chr11 2153027 - Exonic hg19 OV TCGA-04-1519-01A 4 5 Out-of-frame Inter-chr p16.3 p15.5 Oncogene 39022 ChimerSeq STARFusion TCGA_RNA-Seq NEAT1-POLA2 NEAT1 chr11 65201649 + POLA2 chr11 65048425 + Exonic hg19 OV TCGA-13-1488-01A 74 13 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 39023 ChimerSeq STARFusion TCGA_RNA-Seq PSRC1-MYBPHL PSRC1 chr1 109825302 - MYBPHL chr1 109840879 - Exonic hg19 OV TCGA-13-1488-01A 55 19 In-Frame Intra-chr p13.3 p13.3 Seq+ 39024 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-13-1488-01A 38 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39025 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-LAPTM5 PUM1 chr1 31532051 - LAPTM5 chr1 31215396 - Exonic hg19 OV TCGA-13-1488-01A 26 13 In-Frame Intra-chr p35.2 p35.2 Seq+ 39026 ChimerSeq STARFusion TCGA_RNA-Seq UQCRH-SLC48A1 UQCRH chr1 46769492 + SLC48A1 chr12 48165953 + Exonic hg19 OV TCGA-13-1488-01A 20 20 CDS-5'UTR Inter-chr p33 q13.11 Seq+ 39027 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-13-1488-01A 22 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 39028 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC5-SERPING1 ZDHHC5 chr11 57457909 + SERPING1 chr11 57381801 + Exonic hg19 OV TCGA-13-1488-01A 14 3 Out-of-frame Intra-chr q12.1 q12.1 39029 ChimerSeq STARFusion TCGA_RNA-Seq UQCRH-SLC48A1 UQCRH chr1 46769492 + SLC48A1 chr12 48172811 + Exonic hg19 OV TCGA-13-1488-01A 9 19 Out-of-frame Inter-chr p33 q13.11 Seq+ 39030 ChimerSeq STARFusion TCGA_RNA-Seq NEAT1-POLA2 NEAT1 chr11 65190854 + POLA2 chr11 65048463 + Exonic hg19 OV TCGA-13-1488-01A 10 13 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 39031 ChimerSeq STARFusion TCGA_RNA-Seq ROCK2-C9orf89 ROCK2 chr2 11484122 - C9orf89 chr9 95869956 + Exonic hg19 OV TCGA-13-1488-01A 9 1 Out-of-frame Inter-chr p25.1 AGC:DMPK 39032 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-13-1488-01A 9 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39033 ChimerSeq STARFusion TCGA_RNA-Seq WNK2-SUSD3 WNK2 chr9 96002258 + SUSD3 chr9 95846819 + Exonic hg19 OV TCGA-13-1488-01A 8 1 Out-of-frame Intra-chr q22.31 Tumor suppressor gene q22.31 Seq+ 39034 ChimerSeq STARFusion TCGA_RNA-Seq PPAN-GIPC2 PPAN chr19 10217088 + GIPC2 chr1 78601276 + Exonic hg19 OV TCGA-13-1488-01A 6 3 Out-of-frame Inter-chr p13.2 p31.1 Seq+ 39035 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-LAPTM5 PUM1 chr1 31532146 - LAPTM5 chr1 31215396 - Exonic hg19 OV TCGA-13-1488-01A 3 13 In-Frame Intra-chr p35.2 p35.2 Seq+ 39036 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-LAPTM5 PUM1 chr1 31528160 - LAPTM5 chr1 31215396 - Exonic hg19 OV TCGA-13-1488-01A 3 13 Out-of-frame Intra-chr p35.2 p35.2 Seq+ 39037 ChimerSeq STARFusion TCGA_RNA-Seq ATF7-ATP5G2 ATF7 chr12 53994737 - ATP5G2 chr12 54070182 - Exonic hg19 OV TCGA-13-1488-01A 3 7 CDS-5'UTR Intra-chr q13.13 Transcription factor q13.13 Seq+ 39038 ChimerSeq STARFusion TCGA_RNA-Seq ATF7-ATP5G2 ATF7 chr12 53994737 - ATP5G2 chr12 54066429 - Exonic hg19 OV TCGA-13-1488-01A 3 7 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 Seq+ 39039 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-1563-01A 135 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39040 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-24-1563-01A 24 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 39041 ChimerSeq STARFusion TCGA_RNA-Seq BEST1-KIAA1217 BEST1 chr11 61734933 + KIAA1217 chr10 24497864 + Exonic hg19 OV TCGA-24-1563-01A 20 0 Out-of-frame Inter-chr q12.3 p12.2 39042 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-24-1563-01A 20 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39043 ChimerSeq STARFusion TCGA_RNA-Seq THSD4-NR2E3 THSD4 chr15 71839820 + NR2E3 chr15 72099357 + Exonic hg19 OV TCGA-24-1563-01A 6 13 Out-of-frame Intra-chr q23 q23 Transcription factor Seq+ 39044 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R5E-GPHB5 PPP2R5E chr14 64006247 - GPHB5 chr14 63779830 - Exonic hg19 OV TCGA-24-1563-01A 5 3 Out-of-frame Intra-chr q23.2 q23.2 39045 ChimerSeq STARFusion TCGA_RNA-Seq THSD4-NR2E3 THSD4 chr15 71704162 + NR2E3 chr15 72099357 + Exonic hg19 OV TCGA-24-1563-01A 2 13 CDS-5'UTR Intra-chr q23 q23 Transcription factor Seq+ 39046 ChimerSeq STARFusion TCGA_RNA-Seq USP34-PLEKHG1 USP34 chr2 61647881 - PLEKHG1 chr6 151107526 + Exonic hg19 OV TCGA-25-2401-01A 18 4 In-Frame Inter-chr p15 q25.1 Seq+ 39047 ChimerSeq STARFusion TCGA_RNA-Seq DEPDC1B-ELOVL7 DEPDC1B chr5 59982789 - ELOVL7 chr5 60050660 - Exonic hg19 OV TCGA-25-2401-01A 16 3 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 39048 ChimerSeq STARFusion TCGA_RNA-Seq CCDC149-C9orf3 CCDC149 chr4 24878158 - C9orf3 chr9 97822976 + Exonic hg19 OV TCGA-25-2401-01A 15 2 In-Frame Inter-chr p15.2 q22.32 Seq+ 39049 ChimerSeq STARFusion TCGA_RNA-Seq ITGB3-MYL4 ITGB3 chr17 45331306 + MYL4 chr17 45286755 + Exonic hg19 OV TCGA-25-2401-01A 13 1 CDS-5'UTR Intra-chr q21.32 Oncogene Tumor suppressor gene q21.32 Seq+ 39050 ChimerSeq STARFusion TCGA_RNA-Seq ITGB3-MYL4 ITGB3 chr17 45331306 + MYL4 chr17 45286755 + Exonic hg19 OV TCGA-25-2401-01A 13 1 CDS-5'UTR Intra-chr q21.32 Oncogene Tumor suppressor gene q21.32 Seq+ 39051 ChimerSeq STARFusion TCGA_RNA-Seq ACADS-GTPBP10 ACADS chr12 121174938 + GTPBP10 chr7 89982130 + Exonic hg19 OV TCGA-25-2401-01A 12 0 In-Frame Inter-chr q24.31 q21.13 Seq+ 39052 ChimerSeq STARFusion TCGA_RNA-Seq NR1H2-MYH14 NR1H2 chr19 50885431 + MYH14 chr19 50792693 + Exonic hg19 OV TCGA-25-2401-01A 11 3 In-Frame Intra-chr q13.33 Transcription factor q13.33 Seq+ 39053 ChimerSeq STARFusion TCGA_RNA-Seq NCAPG2-ESYT2 NCAPG2 chr7 158494513 - ESYT2 chr7 158557544 - Exonic hg19 OV TCGA-25-2401-01A 8 0 In-Frame Intra-chr q36.3 q36.3 39054 ChimerSeq STARFusion TCGA_RNA-Seq ASNA1-RLN3 ASNA1 chr19 12849472 + RLN3 chr19 14141522 + Exonic hg19 OV TCGA-25-1319-01A 168 77 Out-of-frame Intra-chr p13.13 p13.12 Seq+ 39055 ChimerSeq STARFusion TCGA_RNA-Seq ZNF791-RNASEH2A ZNF791 chr19 12721896 + RNASEH2A chr19 12917822 + Exonic hg19 OV TCGA-25-1319-01A 96 34 Out-of-frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 39056 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-25-1319-01A 81 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39057 ChimerSeq STARFusion TCGA_RNA-Seq ZNF443-MYO9B ZNF443 chr19 12551726 - MYO9B chr19 17303555 + Exonic hg19 OV TCGA-25-1319-01A 48 34 In-Frame Intra-chr p13.2 Transcription factor p13.11 Seq+ 39058 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-25-1319-01A 56 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39059 ChimerSeq STARFusion TCGA_RNA-Seq RBBP4-HIVEP3 RBBP4 chr1 33138502 + HIVEP3 chr1 42094618 - Exonic hg19 OV TCGA-25-1319-01A 37 14 CDS-5'UTR Intra-chr p35.1 p34.2 Tumor suppressor gene Transcription factor Seq+ 39060 ChimerSeq STARFusion TCGA_RNA-Seq NCK2-ACTR3 NCK2 chr2 106433070 + ACTR3 chr2 114670749 + Exonic hg19 OV TCGA-25-1319-01A 32 13 5'UTR-CDS Intra-chr q12.2 q14.1 Seq+ 39061 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-25-1319-01A 32 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 39062 ChimerSeq STARFusion TCGA_RNA-Seq PAK1-POU5F1B PAK1 chr11 77184597 - POU5F1B chr8 128427133 + Exonic hg19 OV TCGA-25-1319-01A 28 14 5'UTR-5'UTR Inter-chr q14.1 STE:STE20 q24.21 Transcription factor Seq+ 39063 ChimerSeq STARFusion TCGA_RNA-Seq ZNF443-MYO9B ZNF443 chr19 12511882 - MYO9B chr19 17303555 + Exonic hg19 OV TCGA-25-1319-01A 15 34 3'UTR-CDS Intra-chr p13.2 Transcription factor p13.11 Seq+ 39064 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB1-MED26 DNAJB1 chr19 14627278 - MED26 chr19 16689220 - Exonic hg19 OV TCGA-25-1319-01A 16 12 In-Frame Intra-chr p13.12 Tumor suppressor gene p13.11 Seq+ 39065 ChimerSeq STARFusion TCGA_RNA-Seq SPC24-CACNA1A SPC24 chr19 11258689 - CACNA1A chr19 13710870 - Exonic hg19 OV TCGA-25-1319-01A 17 4 CDS-5'UTR Intra-chr p13.2 p13.13 39066 ChimerSeq STARFusion TCGA_RNA-Seq HOOK2-ZC3H8 HOOK2 chr19 12873941 - ZC3H8 chr2 112972288 - Exonic hg19 OV TCGA-25-1319-01A 15 4 Out-of-frame Inter-chr p13.13 q14.1 Transcription factor Seq+ 39067 ChimerSeq STARFusion TCGA_RNA-Seq ZNF684-CPA6 ZNF684 chr1 40998853 + CPA6 chr8 68536486 - Exonic hg19 OV TCGA-25-1319-01A 9 8 Out-of-frame Inter-chr p34.2 Transcription factor q13.2 Seq+ 39068 ChimerSeq STARFusion TCGA_RNA-Seq ATP9B-PARD6G ATP9B chr18 76974038 + PARD6G chr18 77960815 - Exonic hg19 OV TCGA-25-1319-01A 9 1 In-Frame Intra-chr q23 39069 ChimerSeq STARFusion TCGA_RNA-Seq TECR-ILVBL TECR chr19 14640523 + ILVBL chr19 15227333 - Exonic hg19 OV TCGA-25-1319-01A 6 7 Out-of-frame Intra-chr p13.12 p13.12 Seq+ 39070 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-ZNF564 FCHSD2 chr11 72578910 - ZNF564 chr19 12639510 - Exonic hg19 OV TCGA-25-1319-01A 5 6 In-Frame Inter-chr q13.4 p13.2 Transcription factor Seq+ 39071 ChimerSeq STARFusion TCGA_RNA-Seq ILVBL-TECR ILVBL chr19 15226661 - TECR chr19 14673337 + Exonic hg19 OV TCGA-25-1319-01A 5 5 In-Frame Intra-chr p13.12 p13.12 Seq+ 39072 ChimerSeq STARFusion TCGA_RNA-Seq ZNF684-CPA6 ZNF684 chr1 40998853 + CPA6 chr8 68541528 - Exonic hg19 OV TCGA-25-1319-01A 3 8 Out-of-frame Inter-chr p34.2 Transcription factor q13.2 Seq+ 39073 ChimerSeq STARFusion TCGA_RNA-Seq ZNF684-CPA6 ZNF684 chr1 40997459 + CPA6 chr8 68536486 - Exonic hg19 OV TCGA-25-1319-01A 2 8 5'UTR-CDS Inter-chr p34.2 Transcription factor q13.2 Seq+ 39074 ChimerSeq STARFusion TCGA_RNA-Seq KIF3C-RBKS KIF3C chr2 26203242 - RBKS chr2 28004655 - Exonic hg19 OV TCGA-29-1699-01A 94 27 In-Frame Intra-chr p23.3 p23.2 Seq+ 39075 ChimerSeq STARFusion TCGA_RNA-Seq GYS1-HOMER3 GYS1 chr19 49494559 - HOMER3 chr19 19045219 - Exonic hg19 OV TCGA-29-1699-01A 65 25 In-Frame Intra-chr q13.33 p13.11 Seq+ 39076 ChimerSeq STARFusion TCGA_RNA-Seq SCAF8-TIAM2 SCAF8 chr6 155095206 + TIAM2 chr6 155228864 + Exonic hg19 OV TCGA-29-1699-01A 28 1 CDS-5'UTR Intra-chr q25.2 q25.2 39077 ChimerSeq STARFusion TCGA_RNA-Seq CCDC37-BCAM CCDC37 chr3 126152026 + BCAM chr19 45322835 + Exonic hg19 OV TCGA-29-1699-01A 25 0 Out-of-frame Inter-chr q13.32 39078 ChimerSeq STARFusion TCGA_RNA-Seq LIMK2-OSBP2 LIMK2 chr22 31621805 + OSBP2 chr22 31266416 + Exonic hg19 OV TCGA-29-1699-01A 24 4 Out-of-frame Intra-chr q12.2 TKL:LISK q12.2 Seq+ 39079 ChimerSeq STARFusion TCGA_RNA-Seq PDPR-LINGO1 PDPR chr16 70163025 + LINGO1 chr15 77908242 - Exonic hg19 OV TCGA-29-1699-01A 22 9 Out-of-frame Inter-chr q22.1 q24.3 39080 ChimerSeq STARFusion TCGA_RNA-Seq RIPK1-SERPINB9 RIPK1 chr6 3064293 + SERPINB9 chr6 2900855 - Exonic hg19 OV TCGA-29-1699-01A 24 1 5'UTR-5'UTR Intra-chr p25.2 TKL:RIPK p25.2 39081 ChimerSeq STARFusion TCGA_RNA-Seq RAI14-COPS5 RAI14 chr5 34656580 + COPS5 chr8 67963576 - Exonic hg19 OV TCGA-29-1699-01A 23 2 5'UTR-CDS Inter-chr p13.2 q13.1 39082 ChimerSeq STARFusion TCGA_RNA-Seq RAI14-PPP1R42 RAI14 chr5 34656580 + PPP1R42 chr8 67963576 - Exonic hg19 OV TCGA-29-1699-01A 23 2 5'UTR-5'UTR Inter-chr p13.2 q13.1 39083 ChimerSeq STARFusion TCGA_RNA-Seq MED24-KRT40 MED24 chr17 38209551 - KRT40 chr17 39135276 - Exonic hg19 OV TCGA-29-2428-01A 416 50 In-Frame Intra-chr q21.1 Seq+ 39084 ChimerSeq STARFusion TCGA_RNA-Seq RPL41-IGFBP2 RPL41 chr12 56510584 + IGFBP2 chr2 217498142 + Exonic hg19 OV TCGA-29-2428-01A 14 0 Out-of-frame Inter-chr q13.2 q35 39085 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106209411 - Exonic hg19 OV TCGA-29-2428-01A 10 1 Out-of-frame Inter-chr q21.2 32.33 39086 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076851 + IGHG1 chr14 106209411 - Exonic hg19 OV TCGA-29-2428-01A 10 1 Out-of-frame Inter-chr q21.2 q32.33 39087 ChimerSeq STARFusion TCGA_RNA-Seq MUC16-RARA MUC16 chr19 9045564 - RARA chr17 38487109 + Exonic hg19 OV TCGA-29-2428-01A 7 2 CDS-5'UTR Inter-chr p13.2 q21.2 Oncogene Transcription factor Seq+ 39088 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-29-2428-01A 7 1 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39089 ChimerSeq STARFusion TCGA_RNA-Seq CD9-IGF2 CD9 chr12 6347191 + IGF2 chr11 2151999 - Exonic hg19 OV TCGA-29-2428-01A 5 3 Out-of-frame Inter-chr p13.31 p15.5 Oncogene 39090 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-04-1338-01A 14 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39091 ChimerSeq STARFusion TCGA_RNA-Seq RWDD1-FAM26D RWDD1 chr6 116901523 + FAM26D chr6 116864928 + Exonic hg19 OV TCGA-04-1338-01A 7 3 5'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 39092 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D5-AIG1 TBC1D5 chr3 17783973 - AIG1 chr6 143605247 + Exonic hg19 OV TCGA-04-1338-01A 6 4 5'UTR-CDS Inter-chr p24.3 q24.2 Seq+ 39093 ChimerSeq STARFusion TCGA_RNA-Seq AKAP8-BRD4 AKAP8 chr19 15487787 - BRD4 chr19 15366403 - Exonic hg19 OV TCGA-04-1338-01A 5 5 Out-of-frame Intra-chr p13.12 Transcription factor p13.12 Atypical:BRD 39094 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-04-1338-01A 6 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 39095 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-IGF2 MALAT1 chr11 65266546 + IGF2 chr11 2152009 - Exonic hg19 OV TCGA-04-1338-01A 3 7 Out-of-frame Intra-chr q13.1 p15.5 Oncogene 39096 ChimerSeq STARFusion TCGA_RNA-Seq PLEC-TNNI1 PLEC chr8 145000952 - TNNI1 chr1 201390854 - Exonic hg19 OV TCGA-04-1338-01A 4 3 CDS-5'UTR Inter-chr q24.3 q32.1 Seq+ 39097 ChimerSeq STARFusion TCGA_RNA-Seq GNAS-IGF2 GNAS chr20 57486149 + IGF2 chr11 2154012 - Exonic hg19 OV TCGA-04-1338-01A 3 6 Out-of-frame Inter-chr q13.32 Oncogene p15.5 Oncogene Seq+ 39098 ChimerSeq STARFusion TCGA_RNA-Seq QARS-C3orf84 QARS chr3 49138788 - C3orf84 chr3 49215971 - Exonic hg19 OV TCGA-13-1411-01A 366 96 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 39099 ChimerSeq STARFusion TCGA_RNA-Seq ST3GAL2-COG4 ST3GAL2 chr16 70422270 - COG4 chr16 70534994 - Exonic hg19 OV TCGA-13-1411-01A 66 10 In-Frame Intra-chr q22.1 q22.1 Seq+ 39100 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-13-1411-01A 44 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39101 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-13-1411-01A 34 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39102 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-13-1411-01A 27 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 39103 ChimerSeq STARFusion TCGA_RNA-Seq NACA2-LSR NACA2 chr17 59668174 - LSR chr19 35757332 + Exonic hg19 OV TCGA-13-1411-01A 16 8 Out-of-frame Inter-chr q23.2 q13.12 Seq+ 39104 ChimerSeq STARFusion TCGA_RNA-Seq LRRFIP1-ASB1 LRRFIP1 chr2 238617273 + ASB1 chr2 239342190 + Exonic hg19 OV TCGA-13-1411-01A 7 6 Out-of-frame Intra-chr q37.3 q37.3 39105 ChimerSeq STARFusion TCGA_RNA-Seq ADIPOR2-NINJ2 ADIPOR2 chr12 1800379 + NINJ2 chr12 675344 - Exonic hg19 OV TCGA-24-1616-01A 333 87 5'UTR-CDS Intra-chr p13.33 p13.33 Seq+ 39106 ChimerSeq STARFusion TCGA_RNA-Seq PKN1-EMR3 PKN1 chr19 14544354 + EMR3 chr19 14749152 - Exonic hg19 OV TCGA-24-1616-01A 135 53 In-Frame Intra-chr p13.12 AGC:PKN Seq+ 39107 ChimerSeq STARFusion TCGA_RNA-Seq ADIPOR2-NINJ2 ADIPOR2 chr12 1800357 + NINJ2 chr12 675344 - Exonic hg19 OV TCGA-24-1616-01A 57 87 5'UTR-CDS Intra-chr p13.33 p13.33 Seq+ 39108 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-1616-01A 64 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39109 ChimerSeq STARFusion TCGA_RNA-Seq PPP1CB-PLB1 PPP1CB chr2 28975042 + PLB1 chr2 28752184 + Exonic hg19 OV TCGA-24-1616-01A 44 38 In-Frame Intra-chr p23.2 p23.2 Seq+ 39110 ChimerSeq STARFusion TCGA_RNA-Seq SHROOM3-MTHFD2L SHROOM3 chr4 77507622 + MTHFD2L chr4 75065511 + Exonic hg19 OV TCGA-24-1616-01A 34 19 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 39111 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-24-1616-01A 13 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 39112 ChimerSeq STARFusion TCGA_RNA-Seq SHROOM3-MTHFD2L SHROOM3 chr4 77476916 + MTHFD2L chr4 75061456 + Exonic hg19 OV TCGA-24-1616-01A 7 19 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 39113 ChimerSeq STARFusion TCGA_RNA-Seq SHROOM3-MTHFD2L SHROOM3 chr4 77476916 + MTHFD2L chr4 75065511 + Exonic hg19 OV TCGA-24-1616-01A 6 19 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 39114 ChimerSeq STARFusion TCGA_RNA-Seq THRAP3-MAP7D1 THRAP3 chr1 36725085 + MAP7D1 chr1 36636572 + Exonic hg19 OV TCGA-24-1616-01A 6 15 5'UTR-CDS Intra-chr p34.3 p34.3 Seq+ 39115 ChimerSeq STARFusion TCGA_RNA-Seq CACNA1D-DNAH1 CACNA1D chr3 53535747 + DNAH1 chr3 52391630 + Exonic hg19 OV TCGA-24-1603-01A 17 5 In-Frame Intra-chr p21.1 p21.1 Seq+ 39116 ChimerSeq STARFusion TCGA_RNA-Seq LACE1-SNX3 LACE1 chr6 108616422 + SNX3 chr6 108544249 - Exonic hg19 OV TCGA-24-1603-01A 16 5 Out-of-frame Intra-chr q21 Seq+ 39117 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821632 - Exonic hg19 OV TCGA-24-1603-01A 16 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39118 ChimerSeq STARFusion TCGA_RNA-Seq DNAH1-PRKCD DNAH1 chr3 52391751 + PRKCD chr3 53221356 + Exonic hg19 OV TCGA-24-1603-01A 13 8 In-Frame Intra-chr p21.1 p21.1 Tumor suppressor gene Seq+ 39119 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC2P1-ZNF550 TRAPPC2P1 chr19 57875311 + ZNF550 chr19 58046638 - Exonic hg19 OV TCGA-24-1603-01A 9 6 Out-of-frame Intra-chr q13.43 Transcription factor 39120 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-TCIRG1 FCHSD2 chr11 72794741 - TCIRG1 chr11 67806503 + Exonic hg19 OV TCGA-10-0938-01A 234 99 Out-of-frame Intra-chr q13.4 q13.2 Seq+ 39121 ChimerSeq STARFusion TCGA_RNA-Seq NDRG1-OC90 NDRG1 chr8 134292474 - OC90 chr8 133037022 - Exonic hg19 OV TCGA-10-0938-01A 61 32 Out-of-frame Intra-chr q24.22 Tumor suppressor gene q24.22 Seq+ 39122 ChimerSeq STARFusion TCGA_RNA-Seq MRPL48-CHKA MRPL48 chr11 73519395 + CHKA chr11 67857347 - Exonic hg19 OV TCGA-10-0938-01A 9 4 Out-of-frame Intra-chr q13.4 q13.2 Seq+ 39123 ChimerSeq STARFusion TCGA_RNA-Seq MRPL48-CHKA MRPL48 chr11 73519395 + CHKA chr11 67848924 - Exonic hg19 OV TCGA-10-0938-01A 6 4 Out-of-frame Intra-chr q13.4 q13.2 Seq+ 39124 ChimerSeq STARFusion TCGA_RNA-Seq DENND4C-PLIN2 DENND4C chr9 19332183 + PLIN2 chr9 19131268 - Exonic hg19 OV TCGA-10-0938-01A 5 1 Out-of-frame Intra-chr p22.1 p22.1 39125 ChimerSeq STARFusion TCGA_RNA-Seq SEL1L-MIOS SEL1L chr14 82000019 - MIOS chr7 7625267 + Exonic hg19 OV TCGA-59-A5PD-01A 97 14 In-Frame Inter-chr q31.1 p21.3 Seq+ 39126 ChimerSeq STARFusion TCGA_RNA-Seq TLK1-ADK TLK1 chr2 171939291 - ADK chr10 76429941 + Exonic hg19 OV TCGA-59-A5PD-01A 76 20 Out-of-frame Inter-chr q31.1 Other:TLK q22.2 Seq+ 39127 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D1-NMU TBC1D1 chr4 38055959 + NMU chr4 56466742 - Exonic hg19 OV TCGA-59-A5PD-01A 35 6 Out-of-frame Intra-chr p14 q12 Seq+ 39128 ChimerSeq STARFusion TCGA_RNA-Seq NDC80-IGKC NDC80 chr18 2578024 + IGKC chr2 89160431 - Exonic hg19 OV TCGA-59-A5PD-01A 26 0 Out-of-frame Inter-chr p11.32 p11.2 39129 ChimerSeq STARFusion TCGA_RNA-Seq NDC80-IGKJ4 NDC80 chr18 2578024 + IGKJ4 chr2 89160431 - Exonic hg19 OV TCGA-59-A5PD-01A 25 0 Out-of-frame Inter-chr p11.32 p11.2 39130 ChimerSeq STARFusion TCGA_RNA-Seq TLK1-ADK TLK1 chr2 171938150 - ADK chr10 76429941 + Exonic hg19 OV TCGA-59-A5PD-01A 15 19 5'UTR-CDS Inter-chr q31.1 Other:TLK q22.2 Seq+ 39131 ChimerSeq STARFusion TCGA_RNA-Seq KIF3C-ADCY3 KIF3C chr2 26203242 - ADCY3 chr2 25095588 - Exonic hg19 OV TCGA-59-A5PD-01A 15 13 In-Frame Intra-chr p23.3 p23.3 Seq+ 39132 ChimerSeq STARFusion TCGA_RNA-Seq SIAH2-PRKRIR SIAH2 chr3 150480220 - PRKRIR chr11 76077016 - Exonic hg19 OV TCGA-59-A5PD-01A 16 4 Out-of-frame Inter-chr q25.1 39133 ChimerSeq STARFusion TCGA_RNA-Seq RHOC-TDRKH RHOC chr1 113249700 - TDRKH chr1 151751718 - Exonic hg19 OV TCGA-59-A5PD-01A 12 1 5'UTR-CDS Intra-chr p13.2 q21.3 Seq+ 39134 ChimerSeq STARFusion TCGA_RNA-Seq DHX57-HS2ST1 DHX57 chr2 39081196 - HS2ST1 chr1 87558214 + Exonic hg19 OV TCGA-59-A5PD-01A 11 1 In-Frame Inter-chr p22.1 p22.3 Seq+ 39135 ChimerSeq STARFusion TCGA_RNA-Seq CBL-ATP5L CBL chr11 119077322 + ATP5L chr11 118272223 + Exonic hg19 OV TCGA-59-A5PD-01A 9 4 CDS-5'UTR Intra-chr q23.3 Oncogene Tumor suppressor gene q23.3 Seq+ 39136 ChimerSeq STARFusion TCGA_RNA-Seq IGF2-IGH@ IGF2 chr11 2150369 - IGH@ chr14 106090712 - Exonic hg19 OV TCGA-59-A5PD-01A 8 4 Out-of-frame Inter-chr p15.5 Oncogene 32.33 39137 ChimerSeq STARFusion TCGA_RNA-Seq TANC1-PTP4A1P1 TANC1 chr2 160084476 + PTP4A1P1 chr2 158922375 + Exonic hg19 OV TCGA-23-1809-01A 9 11 Out-of-frame Intra-chr q24.2 q24.1 Seq+ 39138 ChimerSeq STARFusion TCGA_RNA-Seq TANC1-PTP4A1P1 TANC1 chr2 160082290 + PTP4A1P1 chr2 158922375 + Exonic hg19 OV TCGA-23-1809-01A 4 10 Out-of-frame Intra-chr q24.2 q24.1 Seq+ 39139 ChimerSeq STARFusion TCGA_RNA-Seq ADAM10-BLVRB ADAM10 chr15 59041679 - BLVRB chr19 40964452 - Exonic hg19 OV TCGA-57-1582-01A 29 5 3'UTR-CDS Inter-chr q21.3 q13.2 Seq+ 39140 ChimerSeq STARFusion TCGA_RNA-Seq STUB1-MECP2 STUB1 chr16 730684 + MECP2 chrX 153298008 - Exonic hg19 OV TCGA-57-1582-01A 24 8 Out-of-frame Inter-chr p13.3 Tumor suppressor gene q28 Transcription factor Seq+ 39141 ChimerSeq STARFusion TCGA_RNA-Seq EPS15L1-CALR3 EPS15L1 chr19 16582724 - CALR3 chr19 16591517 - Exonic hg19 OV TCGA-57-1582-01A 22 1 In-Frame Intra-chr p13.11 p13.11 Seq+ 39142 ChimerSeq STARFusion TCGA_RNA-Seq FAM168A-DCAF8 FAM168A chr11 73179450 - DCAF8 chr1 160213824 - Exonic hg19 OV TCGA-57-1582-01A 11 8 CDS-5'UTR Inter-chr q13.4 q23.2 Seq+ 39143 ChimerSeq STARFusion TCGA_RNA-Seq FAF2-KIAA1191 FAF2 chr5 175875471 + KIAA1191 chr5 175782752 - Exonic hg19 OV TCGA-57-1582-01A 8 17 Out-of-frame Intra-chr q35.2 q35.2 Seq+ 39144 ChimerSeq STARFusion TCGA_RNA-Seq FAM168A-DCAF8 FAM168A chr11 73179450 - DCAF8 chr1 160213824 - Exonic hg19 OV TCGA-57-1582-01A 11 4 CDS-5'UTR Inter-chr q13.4 q23.2 Seq+ 39145 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC20-UQCRC2 ZDHHC20 chr13 22033193 - UQCRC2 chr16 21979949 + Exonic hg19 OV TCGA-57-1582-01A 9 10 Out-of-frame Inter-chr q12.11 Seq+ 39146 ChimerSeq STARFusion TCGA_RNA-Seq RNF43-MRPS23 RNF43 chr17 56492689 - MRPS23 chr17 55926773 - Exonic hg19 OV TCGA-57-1582-01A 8 6 Out-of-frame Intra-chr q22 Oncogene q22 Seq+ 39147 ChimerSeq STARFusion TCGA_RNA-Seq ANKMY1-PDE11A ANKMY1 chr2 241439375 - PDE11A chr2 178634101 - Exonic hg19 OV TCGA-57-1582-01A 9 0 Out-of-frame Intra-chr q37.3 q31.2 Seq+ 39148 ChimerSeq STARFusion TCGA_RNA-Seq TRAF7-RAB26 TRAF7 chr16 2205859 + RAB26 chr16 2201570 + Exonic hg19 OV TCGA-57-1582-01A 9 0 5'UTR-CDS Intra-chr p13.3 Oncogene p13.3 Seq+ 39149 ChimerSeq STARFusion TCGA_RNA-Seq CGREF1-TRMT44 CGREF1 chr2 27327155 - TRMT44 chr4 8494993 + Exonic hg19 OV TCGA-57-1582-01A 7 6 Out-of-frame Inter-chr p23.3 p16.1 Seq+ 39150 ChimerSeq STARFusion TCGA_RNA-Seq FAF2-KIAA1191 FAF2 chr5 175875471 + KIAA1191 chr5 175775359 - Exonic hg19 OV TCGA-57-1582-01A 4 15 In-Frame Intra-chr q35.2 q35.2 Seq+ 39151 ChimerSeq STARFusion TCGA_RNA-Seq RERE-ENO1 RERE chr1 8877219 - ENO1 chr1 8934976 - Exonic hg19 OV TCGA-57-1582-01A 7 3 5'UTR-5'UTR Intra-chr p36.23 p36.23 Seq+ 39152 ChimerSeq STARFusion TCGA_RNA-Seq RPL13-MTATP8P1 RPL13 chr16 89629370 + MTATP8P1 chr1 568945 + Exonic hg19 OV TCGA-57-1582-01A 7 2 Out-of-frame Inter-chr q24.3 p36.33 39153 ChimerSeq STARFusion TCGA_RNA-Seq FAM168A-DCAF8 FAM168A chr11 73179450 - DCAF8 chr1 160210160 - Exonic hg19 OV TCGA-57-1582-01A 4 8 In-Frame Inter-chr q13.4 q23.2 Seq+ 39154 ChimerSeq STARFusion TCGA_RNA-Seq FAF2-KIAA1191 FAF2 chr5 175875471 + KIAA1191 chr5 175779751 - Exonic hg19 OV TCGA-57-1582-01A 2 15 In-Frame Intra-chr q35.2 q35.2 Seq+ 39155 ChimerSeq STARFusion TCGA_RNA-Seq FAM168A-DCAF8 FAM168A chr11 73179450 - DCAF8 chr1 160233252 - Exonic hg19 OV TCGA-57-1582-01A 3 8 CDS-5'UTR Inter-chr q13.4 q23.2 Seq+ 39156 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC20-UQCRC2 ZDHHC20 chr13 22033193 - UQCRC2 chr16 21982846 + Exonic hg19 OV TCGA-57-1582-01A 2 10 In-Frame Inter-chr q12.11 Seq+ 39157 ChimerSeq STARFusion TCGA_RNA-Seq ZMIZ1-ACPL2 ZMIZ1 chr10 80976031 + ACPL2 chr3 140978965 + Exonic hg19 OV TCGA-61-2003-01A 10 2 CDS-5'UTR Inter-chr q22.3 39158 ChimerSeq STARFusion TCGA_RNA-Seq CHD4-SPSB2 CHD4 chr12 6715440 - SPSB2 chr12 6991451 - Exonic hg19 OV TCGA-31-1946-01A 98 16 CDS-5'UTR Intra-chr p13.31 p13.31 Seq+ 39159 ChimerSeq STARFusion TCGA_RNA-Seq CSDE1-RBFOX1 CSDE1 chr1 115292442 - RBFOX1 chr16 7568149 + Exonic hg19 OV TCGA-31-1946-01A 85 15 5'UTR-CDS Inter-chr p13.2 p13.3 Seq+ 39160 ChimerSeq STARFusion TCGA_RNA-Seq CSDE1-RBFOX1 CSDE1 chr1 115300546 - RBFOX1 chr16 7568149 + Exonic hg19 OV TCGA-31-1946-01A 45 15 5'UTR-CDS Inter-chr p13.2 p13.3 Seq+ 39161 ChimerSeq STARFusion TCGA_RNA-Seq MIEF1-TAB1 MIEF1 chr22 39900539 + TAB1 chr22 39832495 + Exonic hg19 OV TCGA-31-1946-01A 24 1 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 39162 ChimerSeq STARFusion TCGA_RNA-Seq ERI2-DNAH3 ERI2 chr16 20907630 - DNAH3 chr16 20955985 - Exonic hg19 OV TCGA-31-1946-01A 21 2 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 39163 ChimerSeq STARFusion TCGA_RNA-Seq LGALS3-KIR2DL3 LGALS3 chr14 55596018 + KIR2DL3 chr19 55253426 + Exonic hg19 OV TCGA-31-1946-01A 19 0 5'UTR-CDS Inter-chr q22.3 Seq+ 39164 ChimerSeq STARFusion TCGA_RNA-Seq LGALS3-KIR2DP1 LGALS3 chr14 55596018 + KIR2DP1 chr19 55270060 + Exonic hg19 OV TCGA-31-1946-01A 19 0 Out-of-frame Inter-chr q22.3 39165 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-31-1946-01A 15 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39166 ChimerSeq STARFusion TCGA_RNA-Seq DCUN1D3-DNAH3 DCUN1D3 chr16 20907630 - DNAH3 chr16 20955985 - Exonic hg19 OV TCGA-31-1946-01A 9 1 5'UTR-CDS Intra-chr p12.3 Tumor suppressor gene p12.3 Seq+ 39167 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-31-1946-01A 9 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 39168 ChimerSeq STARFusion TCGA_RNA-Seq ERI2-DNAH3 ERI2 chr16 20911526 - DNAH3 chr16 20955985 - Exonic hg19 OV TCGA-31-1946-01A 7 2 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 39169 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-TBCD ANKRD11 chr16 89484692 - TBCD chr17 80828100 + Exonic hg19 OV TCGA-09-2056-01B 98 12 5'UTR-CDS Inter-chr q24.3 Seq+ 39170 ChimerSeq STARFusion TCGA_RNA-Seq CHMP1A-VPS9D1 CHMP1A chr16 89717670 - VPS9D1 chr16 89775364 - Exonic hg19 OV TCGA-09-2056-01B 67 4 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 39171 ChimerSeq STARFusion TCGA_RNA-Seq AFG3L1P-ZNF276 AFG3L1P chr16 90039173 + ZNF276 chr16 89793687 + Exonic hg19 OV TCGA-09-2056-01B 21 0 5'UTR-CDS Intra-chr q24.3 q24.3 Transcription factor 39172 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-09-2056-01B 14 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39173 ChimerSeq STARFusion TCGA_RNA-Seq GALNS-FANCA GALNS chr16 88901714 - FANCA chr16 89864893 - Exonic hg19 OV TCGA-09-2056-01B 13 0 Out-of-frame Intra-chr q24.3 q24.3 Oncogene 39174 ChimerSeq STARFusion TCGA_RNA-Seq CCDC127-SDHAP3 CCDC127 chr5 216844 - SDHAP3 chr5 1574410 - Exonic hg19 OV TCGA-04-1356-01A 121 31 CDS-3'UTR Intra-chr p15.33 p15.33 39175 ChimerSeq STARFusion TCGA_RNA-Seq INSR-EIF6 INSR chr19 7267356 - EIF6 chr20 33868632 - Exonic hg19 OV TCGA-04-1356-01A 31 6 In-Frame Inter-chr p13.2 TK:InsR q11.22 Seq+ 39176 ChimerSeq STARFusion TCGA_RNA-Seq RANGAP1-DESI1 RANGAP1 chr22 41676937 - DESI1 chr22 42003865 - Exonic hg19 OV TCGA-04-1356-01A 27 15 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 39177 ChimerSeq STARFusion TCGA_RNA-Seq SAR1A-NODAL SAR1A chr10 71920760 - NODAL chr10 72195739 - Exonic hg19 OV TCGA-04-1356-01A 26 4 In-Frame Intra-chr q22.1 q22.1 Seq+ 39178 ChimerSeq STARFusion TCGA_RNA-Seq ADD1-SH3BP2 ADD1 chr4 2845751 + SH3BP2 chr4 2822341 + Exonic hg19 OV TCGA-04-1356-01A 23 14 5'UTR-5'UTR Intra-chr p16.3 p16.3 Seq+ 39179 ChimerSeq STARFusion TCGA_RNA-Seq DAK-TMEM109 DAK chr11 61113418 + TMEM109 chr11 60687158 + Exonic hg19 OV TCGA-04-1356-01A 18 2 CDS-5'UTR Intra-chr q12.2 Seq+ 39180 ChimerSeq STARFusion TCGA_RNA-Seq CARD10-POLR2F CARD10 chr22 37911980 - POLR2F chr22 38437075 + Exonic hg19 OV TCGA-04-1356-01A 16 3 CDS-3'UTR Intra-chr q13.1 q13.1 Seq+ 39181 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734942 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-04-1356-01A 13 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39182 ChimerSeq STARFusion TCGA_RNA-Seq SCEL-LMO7 SCEL chr13 78130848 + LMO7 chr13 76427228 + Exonic hg19 OV TCGA-04-1356-01A 12 3 In-Frame Intra-chr q22.3 q22.2 Seq+ 39183 ChimerSeq STARFusion TCGA_RNA-Seq DDX52-ABCF1 DDX52 chr17 36002139 - ABCF1 chr6 30545186 + Exonic hg19 OV TCGA-04-1356-01A 10 4 In-Frame Inter-chr q12 39184 ChimerSeq STARFusion TCGA_RNA-Seq UST-MYB UST chr6 149208165 + MYB chr6 135539002 + Exonic hg19 OV TCGA-04-1356-01A 8 4 In-Frame Intra-chr q25.1 q23.3 Oncogene Transcription factor Seq+ 39185 ChimerSeq STARFusion TCGA_RNA-Seq ABHD17A-MOB3A ABHD17A chr19 1879920 - MOB3A chr19 2085327 - Exonic hg19 OV TCGA-04-1356-01A 6 4 Out-of-frame Intra-chr p13.3 p13.3 39186 ChimerSeq STARFusion TCGA_RNA-Seq RANGAP1-DESI1 RANGAP1 chr22 41681990 - DESI1 chr22 42003865 - Exonic hg19 OV TCGA-04-1356-01A 3 15 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 39187 ChimerSeq STARFusion TCGA_RNA-Seq ADD1-SH3BP2 ADD1 chr4 2845751 + SH3BP2 chr4 2811506 + Exonic hg19 OV TCGA-04-1356-01A 3 14 5'UTR-5'UTR Intra-chr p16.3 p16.3 Seq+ 39188 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-13-1498-01A 30 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39189 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-13-1498-01A 12 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 39190 ChimerSeq STARFusion TCGA_RNA-Seq MGRN1-C16orf96 MGRN1 chr16 4702825 + C16orf96 chr16 4643225 + Exonic hg19 OV TCGA-13-1498-01A 10 2 In-Frame Intra-chr p13.3 p13.3 Seq+ 39191 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2B-IGSF8 GATAD2B chr1 153895209 - IGSF8 chr1 160065036 - Exonic hg19 OV TCGA-13-1498-01A 9 3 5'UTR-CDS Intra-chr Transcription factor q23.2 Seq+ 39192 ChimerSeq STARFusion TCGA_RNA-Seq ZNF844-RPL28 ZNF844 chr19 12175691 + RPL28 chr19 55914311 + Exonic hg19 OV TCGA-13-0916-01A 188 79 CDS-3'UTR Intra-chr p13.2 Transcription factor q13.42 39193 ChimerSeq STARFusion TCGA_RNA-Seq FOXP1-RUFY1 FOXP1 chr3 71348971 - RUFY1 chr5 179036377 + Exonic hg19 OV TCGA-13-0916-01A 107 25 5'UTR-CDS Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 39194 ChimerSeq STARFusion TCGA_RNA-Seq FUT8-CCDC85C FUT8 chr14 65922436 + CCDC85C chr14 100002425 - Exonic hg19 OV TCGA-13-0916-01A 78 19 5'UTR-CDS Intra-chr q23.3 q32.2 Seq+ 39195 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPF-ZNF569 HNRNPF chr10 43904579 - ZNF569 chr19 37956375 - Exonic hg19 OV TCGA-13-0916-01A 61 14 5'UTR-5'UTR Inter-chr q11.21 q13.12 Transcription factor Seq+ 39196 ChimerSeq STARFusion TCGA_RNA-Seq AUTS2-PNLIPRP3 AUTS2 chr7 69364484 + PNLIPRP3 chr10 118215234 + Exonic hg19 OV TCGA-13-0916-01A 34 8 In-Frame Inter-chr q11.22 q25.3 Seq+ 39197 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPF-ZNF569 HNRNPF chr10 43903165 - ZNF569 chr19 37956375 - Exonic hg19 OV TCGA-13-0916-01A 31 14 5'UTR-5'UTR Inter-chr q11.21 q13.12 Transcription factor Seq+ 39198 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPF-ZNF569 HNRNPF chr10 43904175 - ZNF569 chr19 37956375 - Exonic hg19 OV TCGA-13-0916-01A 24 14 5'UTR-5'UTR Inter-chr q11.21 q13.12 Transcription factor Seq+ 39199 ChimerSeq STARFusion TCGA_RNA-Seq CDK6-SHFM1 CDK6 chr7 92404010 - SHFM1 chr7 96356972 - Exonic hg19 OV TCGA-13-0916-01A 17 28 CDS-5'UTR Intra-chr q21.2 CMGC:CDK Oncogene Tumor suppressor gene 39200 ChimerSeq STARFusion TCGA_RNA-Seq CDK6-SHFM1 CDK6 chr7 92404010 - SHFM1 chr7 96324203 - Exonic hg19 OV TCGA-13-0916-01A 16 26 Out-of-frame Intra-chr q21.2 CMGC:CDK Oncogene Tumor suppressor gene 39201 ChimerSeq STARFusion TCGA_RNA-Seq FOXP1-RUFY1 FOXP1 chr3 71348972 - RUFY1 chr5 179036375 + Exonic hg19 OV TCGA-13-0916-01A 16 25 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 39202 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-13-0916-01A 22 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39203 ChimerSeq STARFusion TCGA_RNA-Seq ARRDC1-EHMT1 ARRDC1 chr9 140500287 + EHMT1 chr9 140605419 + Exonic hg19 OV TCGA-13-0916-01A 17 5 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 39204 ChimerSeq STARFusion TCGA_RNA-Seq INTS6-DCBLD2 INTS6 chr13 52025161 - DCBLD2 chr3 98600611 - Exonic hg19 OV TCGA-23-1114-01B 75 16 Out-of-frame Inter-chr q14.3 Tumor suppressor gene q12.1 Seq+ 39205 ChimerSeq STARFusion TCGA_RNA-Seq TRAM2-SUPT3H TRAM2 chr6 52380804 - SUPT3H chr6 44797594 - Exonic hg19 OV TCGA-23-1114-01B 17 7 In-Frame Intra-chr p12.2 p21.1 39206 ChimerSeq STARFusion TCGA_RNA-Seq ORC2-CPEB1 ORC2 chr2 201828213 - CPEB1 chr15 83240282 - Exonic hg19 OV TCGA-23-1114-01B 13 0 5'UTR-5'UTR Inter-chr q33.1 q25.2 Transcription factor Seq+ 39207 ChimerSeq STARFusion TCGA_RNA-Seq LSM14A-UBA2 LSM14A chr19 34699956 + UBA2 chr19 34942886 + Exonic hg19 OV TCGA-23-1114-01B 11 3 In-Frame Intra-chr q13.11 39208 ChimerSeq STARFusion TCGA_RNA-Seq RYBP-ROBO2 RYBP chr3 72495647 - ROBO2 chr3 77526565 + Exonic hg19 OV TCGA-23-1114-01B 9 9 Out-of-frame Intra-chr p12.3 Seq+ 39209 ChimerSeq STARFusion TCGA_RNA-Seq PPT1-CAP1 PPT1 chr1 40544232 - CAP1 chr1 40527407 + Exonic hg19 OV TCGA-61-1736-01B 155 24 In-Frame Intra-chr p34.2 p34.2 Seq+ 39210 ChimerSeq STARFusion TCGA_RNA-Seq ZMPSTE24-CAP1 ZMPSTE24 chr1 40737707 + CAP1 chr1 40535362 + Exonic hg19 OV TCGA-61-1736-01B 115 18 In-Frame Intra-chr p34.2 p34.2 Seq+ 39211 ChimerSeq STARFusion TCGA_RNA-Seq SSX2IP-LPAR3 SSX2IP chr1 85155837 - LPAR3 chr1 85279854 - Exonic hg19 OV TCGA-61-1736-01B 95 32 5'UTR-CDS Intra-chr p22.3 p22.3 Seq+ 39212 ChimerSeq STARFusion TCGA_RNA-Seq YY1AP1-ARHGEF2 YY1AP1 chr1 155638418 - ARHGEF2 chr1 155939091 - Exonic hg19 OV TCGA-61-1736-01B 41 5 In-Frame Intra-chr q22 q22 Seq+ 39213 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-61-1736-01B 31 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39214 ChimerSeq STARFusion TCGA_RNA-Seq SSX2IP-LPAR3 SSX2IP chr1 85156054 - LPAR3 chr1 85279854 - Exonic hg19 OV TCGA-61-1736-01B 17 32 5'UTR-CDS Intra-chr p22.3 p22.3 Seq+ 39215 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-61-1736-01B 19 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 39216 ChimerSeq STARFusion TCGA_RNA-Seq ALDH1A2-ADAM10 ALDH1A2 chr15 58302847 - ADAM10 chr15 59009926 - Exonic hg19 OV TCGA-61-1736-01B 11 3 CDS-3'UTR Intra-chr q21.3 Tumor suppressor gene q21.3 39217 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-CDK12 GRB7 chr17 37894386 + CDK12 chr17 37721013 + Exonic hg19 OV TCGA-61-1736-01B 10 1 5'UTR-3'UTR Intra-chr q12 q12 Oncogene Seq+ 39218 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-DEFB123 TPX2 chr20 30371724 + DEFB123 chr20 30037832 + Exonic hg19 OV TCGA-61-1736-01B 10 0 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 39219 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D22A-POLDIP3 TBC1D22A chr22 47193517 + POLDIP3 chr22 42983578 - Exonic hg19 OV TCGA-24-1434-01A 40 10 In-Frame Intra-chr q13.31 q13.2 Seq+ 39220 ChimerSeq STARFusion TCGA_RNA-Seq ILK-LPPR1 ILK chr11 6629441 + LPPR1 chr9 104075080 + Exonic hg19 OV TCGA-24-1434-01A 19 4 In-Frame Inter-chr p15.4 TKL:MLK Tumor suppressor gene Seq+ 39221 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D22A-POLDIP3 TBC1D22A chr22 47193517 + POLDIP3 chr22 42981974 - Exonic hg19 OV TCGA-24-1434-01A 4 10 Out-of-frame Intra-chr q13.31 q13.2 Seq+ 39222 ChimerSeq STARFusion TCGA_RNA-Seq ASS1-HMCN2 ASS1 chr9 133329760 + HMCN2 chr9 133294159 + Exonic hg19 OV TCGA-36-1570-01A 89 27 Out-of-frame Intra-chr q34.11 Tumor suppressor gene q34.11 Seq+ 39223 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP8-UTS2 ARHGAP8 chr22 45148507 + UTS2 chr1 7913565 - Exonic hg19 OV TCGA-36-1570-01A 38 17 5'UTR-5'UTR Inter-chr q13.31 p36.23 Seq+ 39224 ChimerSeq STARFusion TCGA_RNA-Seq UNC5A-TTC38 UNC5A chr5 176237821 + TTC38 chr22 46681138 + Exonic hg19 OV TCGA-36-1570-01A 36 10 Out-of-frame Inter-chr q35.2 Tumor suppressor gene q13.31 Seq+ 39225 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP8-UTS2 ARHGAP8 chr22 45173109 + UTS2 chr1 7913565 - Exonic hg19 OV TCGA-36-1570-01A 25 17 Out-of-frame Inter-chr q13.31 p36.23 Seq+ 39226 ChimerSeq STARFusion TCGA_RNA-Seq MICALL1-EIF3L MICALL1 chr22 38338350 + EIF3L chr22 38259012 + Exonic hg19 OV TCGA-36-1570-01A 26 11 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 39227 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-PTK2 AGO2 chr8 141645584 - PTK2 chr8 141762415 - Exonic hg19 OV TCGA-36-1570-01A 21 7 Out-of-frame Intra-chr q24.3 q24.3 39228 ChimerSeq STARFusion TCGA_RNA-Seq NDUFAF5-ESF1 NDUFAF5 chr20 13775587 + ESF1 chr20 13756916 - Exonic hg19 OV TCGA-36-1570-01A 12 14 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 39229 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP8-UTS2 ARHGAP8 chr22 45162069 + UTS2 chr1 7913565 - Exonic hg19 OV TCGA-36-1570-01A 8 17 Out-of-frame Inter-chr q13.31 p36.23 Seq+ 39230 ChimerSeq STARFusion TCGA_RNA-Seq MICALL1-EIF3L MICALL1 chr22 38337540 + EIF3L chr22 38259279 + Exonic hg19 OV TCGA-36-1570-01A 9 11 3'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 39231 ChimerSeq STARFusion TCGA_RNA-Seq NDUFAF5-ESF1 NDUFAF5 chr20 13773873 + ESF1 chr20 13756916 - Exonic hg19 OV TCGA-36-1570-01A 4 14 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 39232 ChimerSeq STARFusion TCGA_RNA-Seq NDUFAF5-ESF1 NDUFAF5 chr20 13769298 + ESF1 chr20 13756916 - Exonic hg19 OV TCGA-36-1570-01A 2 14 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 39233 ChimerSeq STARFusion TCGA_RNA-Seq NDUFS2-APOA2 NDUFS2 chr1 161183522 + APOA2 chr1 161193215 - Exonic hg19 OV TCGA-23-1111-01A 110 24 CDS-5'UTR Intra-chr q23.3 q23.3 Seq+ 39234 ChimerSeq STARFusion TCGA_RNA-Seq PCBP2-TNFRSF1A PCBP2 chr12 53859757 + TNFRSF1A chr12 6443410 - Exonic hg19 OV TCGA-23-1111-01A 34 13 In-Frame Intra-chr q13.13 p13.31 Seq+ 39235 ChimerSeq STARFusion TCGA_RNA-Seq PSMD3-ZPBP2 PSMD3 chr17 38142965 + ZPBP2 chr17 38026947 + Exonic hg19 OV TCGA-23-1111-01A 28 0 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 39236 ChimerSeq STARFusion TCGA_RNA-Seq CDC42-LINC00339 CDC42 chr1 22379235 + LINC00339 chr1 22351785 + Exonic hg19 OV TCGA-23-1111-01A 25 0 5'UTR-5'UTR Intra-chr p36.12 p36.12 39237 ChimerSeq STARFusion TCGA_RNA-Seq SPECC1L-MKL1 SPECC1L chr22 24743144 + MKL1 chr22 40820385 - Exonic hg19 OV TCGA-23-1111-01A 23 6 In-Frame Intra-chr q11.23 q13.2 Seq+ 39238 ChimerSeq STARFusion TCGA_RNA-Seq PCBP2-TNFRSF1A PCBP2 chr12 53859757 + TNFRSF1A chr12 6451191 - Exonic hg19 OV TCGA-23-1111-01A 21 13 CDS-5'UTR Intra-chr q13.13 p13.31 Seq+ 39239 ChimerSeq STARFusion TCGA_RNA-Seq POC1A-TNNC1 POC1A chr3 52156395 - TNNC1 chr3 52486529 - Exonic hg19 OV TCGA-23-1111-01A 24 1 In-Frame Intra-chr p21.2 p21.1 Seq+ 39240 ChimerSeq STARFusion TCGA_RNA-Seq SPEN-PLEKHM2 SPEN chr1 16203173 + PLEKHM2 chr1 16058384 + Exonic hg19 OV TCGA-23-1111-01A 23 0 In-Frame Intra-chr p36.21 Transcription factor p36.21 Seq+ 39241 ChimerSeq STARFusion TCGA_RNA-Seq ZNF564-TNPO2 ZNF564 chr19 12662144 - TNPO2 chr19 12831804 - Exonic hg19 OV TCGA-23-1111-01A 12 0 CDS-5'UTR Intra-chr p13.2 Transcription factor p13.13 Seq+ 39242 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-C6orf211 ESR1 chr6 152129499 + C6orf211 chr6 151775683 + Exonic hg19 OV TCGA-23-1111-01A 11 2 In-Frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor Seq+ 39243 ChimerSeq STARFusion TCGA_RNA-Seq PCBP2-TNFRSF1A PCBP2 chr12 53856351 + TNFRSF1A chr12 6443410 - Exonic hg19 OV TCGA-23-1111-01A 5 13 In-Frame Intra-chr q13.13 p13.31 Seq+ 39244 ChimerSeq STARFusion TCGA_RNA-Seq MAP2K2-PSMA1 MAP2K2 chr19 4110507 - PSMA1 chr11 14526794 - Exonic hg19 OV TCGA-24-2267-01A 145 6 In-Frame Inter-chr p13.3 STE:STE7 Oncogene p15.2 Seq+ 39245 ChimerSeq STARFusion TCGA_RNA-Seq MAP2K2-PSMA1 MAP2K2 chr19 4110507 - PSMA1 chr11 14526794 - Exonic hg19 OV TCGA-24-2267-01A 135 4 In-Frame Inter-chr p13.3 STE:STE7 Oncogene p15.2 Seq+ 39246 ChimerSeq STARFusion TCGA_RNA-Seq C1orf186-SRGAP2 C1orf186 chr1 206280922 - SRGAP2 chr1 206603512 + Exonic hg19 OV TCGA-24-2267-01A 83 9 5'UTR-CDS Intra-chr q32.1 q32.1 Tumor suppressor gene Seq+ 39247 ChimerSeq STARFusion TCGA_RNA-Seq USP40-PMVK USP40 chr2 234449308 - PMVK chr1 154898959 - Exonic hg19 OV TCGA-24-2267-01A 23 2 In-Frame Inter-chr q37.1 q21.3 Seq+ 39248 ChimerSeq STARFusion TCGA_RNA-Seq WDR74-SNHG1 WDR74 chr11 62606586 - SNHG1 chr11 62621536 - Exonic hg19 OV TCGA-24-2267-01A 21 1 CDS-3'UTR Intra-chr q12.3 q12.3 Seq+ 39249 ChimerSeq STARFusion TCGA_RNA-Seq DYNLRB1-ITCH DYNLRB1 chr20 33104266 + ITCH chr20 33092136 + Exonic hg19 OV TCGA-24-2267-01A 18 0 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 39250 ChimerSeq STARFusion TCGA_RNA-Seq MAP2-DEPTOR MAP2 chr2 210289000 + DEPTOR chr8 121061815 + Exonic hg19 OV TCGA-24-2267-01A 15 3 5'UTR-CDS Inter-chr q34 q24.12 Seq+ 39251 ChimerSeq STARFusion TCGA_RNA-Seq DHX16-MDC1 DHX16 chr6 30627249 - MDC1 chr6 30673875 - Exonic hg19 OV TCGA-24-2267-01A 14 1 In-Frame Intra-chr Tumor suppressor gene Seq+ 39252 ChimerSeq STARFusion TCGA_RNA-Seq SETD5-GXYLT2 SETD5 chr3 9439661 + GXYLT2 chr3 72971355 + Exonic hg19 OV TCGA-24-2267-01A 11 2 5'UTR-CDS Intra-chr p25.3 p13 Seq+ 39253 ChimerSeq STARFusion TCGA_RNA-Seq PCM1-ASAH1 PCM1 chr8 17872349 + ASAH1 chr8 17933096 - Exonic hg19 OV TCGA-24-2267-01A 11 0 In-Frame Intra-chr p22 p22 39254 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5P2-CA5AP1 SLC7A5P2 chr16 21531149 - CA5AP1 chr16 29645272 - Exonic hg19 OV TCGA-24-2267-01A 9 1 Out-of-frame Intra-chr p11.2 39255 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-2267-01A 9 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39256 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-24-2267-01A 7 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 39257 ChimerSeq STARFusion TCGA_RNA-Seq ME3-SYTL2 ME3 chr11 86382804 - SYTL2 chr11 85411636 - Exonic hg19 OV TCGA-24-2267-01A 7 0 In-Frame Intra-chr q14.2 q14.1 Seq+ 39258 ChimerSeq STARFusion TCGA_RNA-Seq USP53-CICP13 USP53 chr4 120138828 + CICP13 chr1 222642659 + Exonic hg19 OV TCGA-24-2267-01A 7 0 Out-of-frame Inter-chr q26 q41 39259 ChimerSeq STARFusion TCGA_RNA-Seq WDR74-SNHG1 WDR74 chr11 62606586 - SNHG1 chr11 62621305 - Exonic hg19 OV TCGA-24-2267-01A 6 1 CDS-3'UTR Intra-chr q12.3 q12.3 Seq+ 39260 ChimerSeq STARFusion TCGA_RNA-Seq RPL32-WNT7A RPL32 chr3 12880848 - WNT7A chr3 13896300 - Exonic hg19 OV TCGA-10-0934-01A 220 135 Out-of-frame Intra-chr p25.2 p25.1 Tumor suppressor gene Seq+ 39261 ChimerSeq STARFusion TCGA_RNA-Seq RAB11FIP5-UBE2E3 RAB11FIP5 chr2 73303121 - UBE2E3 chr2 181925392 + Exonic hg19 OV TCGA-10-0934-01A 95 32 In-Frame Intra-chr p13.2 q31.3 Seq+ 39262 ChimerSeq STARFusion TCGA_RNA-Seq NECAP2-PCBP1 NECAP2 chr1 16783439 + PCBP1 chr2 70314769 + Exonic hg19 OV TCGA-10-0934-01A 80 34 Out-of-frame Inter-chr p36.13 p13.3 Seq+ 39263 ChimerSeq STARFusion TCGA_RNA-Seq WBP1L-HOXC8 WBP1L chr10 104503864 + HOXC8 chr12 54403382 + Exonic hg19 OV TCGA-10-0934-01A 72 29 Out-of-frame Inter-chr q24.32 q13.13 Transcription factor Seq+ 39264 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-10-0934-01A 70 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39265 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC7-PRSS3 ZCCHC7 chr9 37302228 + PRSS3 chr9 33797827 + Exonic hg19 OV TCGA-10-0934-01A 38 22 Out-of-frame Intra-chr p13.2 p13.3 Seq+ 39266 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-10-0934-01A 36 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39267 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-10-0934-01A 32 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 39268 ChimerSeq STARFusion TCGA_RNA-Seq MECOM-LMAN2L MECOM chr3 169381124 - LMAN2L chr2 97400263 - Exonic hg19 OV TCGA-10-0934-01A 25 15 Out-of-frame Inter-chr q26.2 Transcription factor q11.2 Seq+ 39269 ChimerSeq STARFusion TCGA_RNA-Seq RPL32P3-EFCAB12 RPL32P3 chr3 129117851 - EFCAB12 chr3 129140646 - Exonic hg19 OV TCGA-10-0934-01A 24 5 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 39270 ChimerSeq STARFusion TCGA_RNA-Seq KANSL3-LMAN2L KANSL3 chr2 97297049 - LMAN2L chr2 97377762 - Exonic hg19 OV TCGA-10-0934-01A 16 12 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 39271 ChimerSeq STARFusion TCGA_RNA-Seq MECOM-LMAN2L MECOM chr3 169381124 - LMAN2L chr2 97403804 - Exonic hg19 OV TCGA-10-0934-01A 8 15 In-Frame Inter-chr q26.2 Transcription factor q11.2 Seq+ 39272 ChimerSeq STARFusion TCGA_RNA-Seq MED16-POLR2E MED16 chr19 879937 - POLR2E chr19 1089550 - Exonic hg19 OV TCGA-13-A5FT-01A 218 135 In-Frame Intra-chr p13.3 p13.3 Seq+ 39273 ChimerSeq STARFusion TCGA_RNA-Seq TMEM30A-FILIP1 TMEM30A chr6 75994118 - FILIP1 chr6 76124694 - Exonic hg19 OV TCGA-13-A5FT-01A 168 57 CDS-5'UTR Intra-chr q14.1 q14.1 Seq+ 39274 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-PIP4K2B NCOR2 chr12 125051854 - PIP4K2B chr17 36943173 - Exonic hg19 OV TCGA-13-A5FT-01A 84 23 5'UTR-CDS Inter-chr q24.31 q12 Seq+ 39275 ChimerSeq STARFusion TCGA_RNA-Seq PRPF31-CACNG7 PRPF31 chr19 54622013 + CACNG7 chr19 54445290 + Exonic hg19 OV TCGA-13-A5FT-01A 69 33 Out-of-frame Intra-chr q13.42 Seq+ 39276 ChimerSeq STARFusion TCGA_RNA-Seq PDXDC2P-NOB1 PDXDC2P chr16 70099659 - NOB1 chr16 69788629 - Exonic hg19 OV TCGA-13-A5FT-01A 47 34 3'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 39277 ChimerSeq STARFusion TCGA_RNA-Seq CCT3-ARHGEF11 CCT3 chr1 156304504 - ARHGEF11 chr1 156931567 - Exonic hg19 OV TCGA-13-A5FT-01A 49 13 In-Frame Intra-chr q22 q23.1 Seq+ 39278 ChimerSeq STARFusion TCGA_RNA-Seq PRPF31-CACNG7 PRPF31 chr19 54622013 + CACNG7 chr19 54444724 + Exonic hg19 OV TCGA-13-A5FT-01A 43 33 In-Frame Intra-chr q13.42 Seq+ 39279 ChimerSeq STARFusion TCGA_RNA-Seq CRK-SLC43A2 CRK chr17 1359171 - SLC43A2 chr17 1496573 - Exonic hg19 OV TCGA-13-A5FT-01A 39 22 Out-of-frame Intra-chr p13.3 Seq+ 39280 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-SERPINH1 UVRAG chr11 75623083 + SERPINH1 chr11 75277361 + Exonic hg19 OV TCGA-13-A5FT-01A 31 9 CDS-5'UTR Intra-chr q13.5 Tumor suppressor gene q13.5 Seq+ 39281 ChimerSeq STARFusion TCGA_RNA-Seq EIF4A2-DNAJB11 EIF4A2 chr3 186502302 + DNAJB11 chr3 186314843 + Exonic hg19 OV TCGA-13-A5FT-01A 30 8 Out-of-frame Intra-chr q27.3 q27.3 39282 ChimerSeq STARFusion TCGA_RNA-Seq PDXDC2P-NOB1 PDXDC2P chr16 70099659 - NOB1 chr16 69788629 - Exonic hg19 OV TCGA-13-A5FT-01A 27 14 3'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 39283 ChimerSeq STARFusion TCGA_RNA-Seq GRK6-ZNF346 GRK6 chr5 176863531 + ZNF346 chr5 176471390 + Exonic hg19 OV TCGA-13-A5FT-01A 24 15 In-Frame Intra-chr q35.3 q35.2 Transcription factor Seq+ 39284 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R37-PVRL2 PPP1R37 chr19 45650893 + PVRL2 chr19 45377173 + Exonic hg19 OV TCGA-13-A5FT-01A 26 6 3'UTR-CDS Intra-chr q13.32 39285 ChimerSeq STARFusion TCGA_RNA-Seq DAGLA-LINC00301 DAGLA chr11 61447976 + LINC00301 chr11 60416641 + Exonic hg19 OV TCGA-13-A5FT-01A 19 23 5'UTR-5'UTR Intra-chr q12.2 q12.2 Seq+ 39286 ChimerSeq STARFusion TCGA_RNA-Seq DAGLA-LINC00301 DAGLA chr11 61447976 + LINC00301 chr11 60388494 + Exonic hg19 OV TCGA-13-A5FT-01A 17 23 5'UTR-5'UTR Intra-chr q12.2 q12.2 Seq+ 39287 ChimerSeq STARFusion TCGA_RNA-Seq SP1-C12orf10 SP1 chr12 53805219 + C12orf10 chr12 53699692 + Exonic hg19 OV TCGA-13-A5FT-01A 18 6 3'UTR-CDS Intra-chr q13.13 Transcription factor q13.13 Seq+ 39288 ChimerSeq STARFusion TCGA_RNA-Seq XRCC6-L3MBTL2 XRCC6 chr22 42054356 + L3MBTL2 chr22 41621798 + Exonic hg19 OV TCGA-13-A5FT-01A 15 13 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 39289 ChimerSeq STARFusion TCGA_RNA-Seq LRP4-CELF1 LRP4 chr11 46905422 - CELF1 chr11 47510576 - Exonic hg19 OV TCGA-13-A5FT-01A 15 6 In-Frame Intra-chr p11.2 p11.2 Seq+ 39290 ChimerSeq STARFusion TCGA_RNA-Seq HLTF-WWTR1 HLTF chr3 148756836 - WWTR1 chr3 149237006 - Exonic hg19 OV TCGA-13-A5FT-01A 15 2 CDS-3'UTR Intra-chr q24 Tumor suppressor gene q25.1 Seq+ 39291 ChimerSeq STARFusion TCGA_RNA-Seq CTPS1-NFYC CTPS1 chr1 41457517 + NFYC chr1 41204508 + Exonic hg19 OV TCGA-13-A5FT-01A 13 7 CDS-5'UTR Intra-chr p34.2 p34.2 Transcription factor Seq+ 39292 ChimerSeq STARFusion TCGA_RNA-Seq FAM111B-GLYATL1P3 FAM111B chr11 58877179 + GLYATL1P3 chr11 58861002 + Exonic hg19 OV TCGA-13-A5FT-01A 13 5 Out-of-frame Intra-chr q12.1 q12.1 39293 ChimerSeq STARFusion TCGA_RNA-Seq CRK-SLC43A2 CRK chr17 1359374 - SLC43A2 chr17 1496573 - Exonic hg19 OV TCGA-13-A5FT-01A 8 22 Out-of-frame Intra-chr p13.3 Seq+ 39294 ChimerSeq STARFusion TCGA_RNA-Seq EZH1-MAP3K14 EZH1 chr17 40861867 - MAP3K14 chr17 43368134 - Exonic hg19 OV TCGA-13-A5FT-01A 11 4 Out-of-frame Intra-chr q21.2 Tumor suppressor gene q21.31 Seq+ 39295 ChimerSeq STARFusion TCGA_RNA-Seq RNF123-ARIH2 RNF123 chr3 49744331 + ARIH2 chr3 49011132 + Exonic hg19 OV TCGA-13-A5FT-01A 10 3 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 39296 ChimerSeq STARFusion TCGA_RNA-Seq ROR1-EFCAB7 ROR1 chr1 64240179 + EFCAB7 chr1 63997491 + Exonic hg19 OV TCGA-13-A5FT-01A 10 2 In-Frame Intra-chr p31.3 TK:Ror p31.3 39297 ChimerSeq STARFusion TCGA_RNA-Seq DSTYK-INTS3 DSTYK chr1 205180399 - INTS3 chr1 153730048 + Exonic hg19 OV TCGA-13-A5FT-01A 9 5 Out-of-frame Intra-chr q32.1 q21.3 Seq+ 39298 ChimerSeq STARFusion TCGA_RNA-Seq EML4-HNRNPA1P57 EML4 chr2 42396776 + HNRNPA1P57 chr2 41383737 + Exonic hg19 OV TCGA-13-A5FT-01A 9 5 Out-of-frame Intra-chr p21 Oncogene p22.1 Seq+ 39299 ChimerSeq STARFusion TCGA_RNA-Seq EDC3-CYP11A1 EDC3 chr15 74948074 - CYP11A1 chr15 74640396 - Exonic hg19 OV TCGA-13-A5FT-01A 9 4 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 39300 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R37-PVRL2 PPP1R37 chr19 45650054 + PVRL2 chr19 45377173 + Exonic hg19 OV TCGA-13-A5FT-01A 8 6 3'UTR-CDS Intra-chr q13.32 39301 ChimerSeq STARFusion TCGA_RNA-Seq SP1-C12orf10 SP1 chr12 53803345 + C12orf10 chr12 53699692 + Exonic hg19 OV TCGA-13-A5FT-01A 8 6 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 Seq+ 39302 ChimerSeq STARFusion TCGA_RNA-Seq DHX35-VSTM2L DHX35 chr20 37631511 + VSTM2L chr20 36560037 + Exonic hg19 OV TCGA-13-A5FT-01A 8 4 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 39303 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-DHX37 NCOR2 chr12 124970987 - DHX37 chr12 125470811 - Exonic hg19 OV TCGA-13-A5FT-01A 8 4 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 39304 ChimerSeq STARFusion TCGA_RNA-Seq EIF4A2-DNAJB11 EIF4A2 chr3 186502266 + DNAJB11 chr3 186314843 + Exonic hg19 OV TCGA-13-A5FT-01A 5 8 CDS-3'UTR Intra-chr q27.3 q27.3 39305 ChimerSeq STARFusion TCGA_RNA-Seq XRCC6-L3MBTL2 XRCC6 chr22 42054356 + L3MBTL2 chr22 41622666 + Exonic hg19 OV TCGA-13-A5FT-01A 2 13 In-Frame Intra-chr q13.2 q13.2 Seq+ 39306 ChimerSeq STARFusion TCGA_RNA-Seq OLFM2-TMEM205 OLFM2 chr19 10046980 - TMEM205 chr19 11456304 - Exonic hg19 OV TCGA-09-0366-01A 239 162 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 39307 ChimerSeq STARFusion TCGA_RNA-Seq CPAMD8-SMIM7 CPAMD8 chr19 17100453 - SMIM7 chr19 16741873 - Exonic hg19 OV TCGA-09-0366-01A 202 86 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 39308 ChimerSeq STARFusion TCGA_RNA-Seq GAB2-LRRC32 GAB2 chr11 78128692 - LRRC32 chr11 76377002 - Exonic hg19 OV TCGA-09-0366-01A 118 62 CDS-5'UTR Intra-chr q14.1 q13.5 Seq+ 39309 ChimerSeq STARFusion TCGA_RNA-Seq OLFM2-TMEM205 OLFM2 chr19 10046980 - TMEM205 chr19 11456091 - Exonic hg19 OV TCGA-09-0366-01A 33 161 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 39310 ChimerSeq STARFusion TCGA_RNA-Seq NEK6-PTGS1 NEK6 chr9 127020364 + PTGS1 chr9 125143650 + Exonic hg19 OV TCGA-09-0366-01A 45 101 5'UTR-CDS Intra-chr q33.3 Other:NEK q33.2 Seq+ 39311 ChimerSeq STARFusion TCGA_RNA-Seq GAB2-LRRC32 GAB2 chr11 78075062 - LRRC32 chr11 76377002 - Exonic hg19 OV TCGA-09-0366-01A 33 62 5'UTR-5'UTR Intra-chr q14.1 q13.5 Seq+ 39312 ChimerSeq STARFusion TCGA_RNA-Seq CTNNA1-KDM3B CTNNA1 chr5 138163407 + KDM3B chr5 137708363 + Exonic hg19 OV TCGA-09-0366-01A 34 18 In-Frame Intra-chr q31.2 Oncogene q31.2 Tumor suppressor gene Seq+ 39313 ChimerSeq STARFusion TCGA_RNA-Seq NEK6-PTGS1 NEK6 chr9 127020640 + PTGS1 chr9 125143650 + Exonic hg19 OV TCGA-09-0366-01A 13 101 5'UTR-CDS Intra-chr q33.3 Other:NEK q33.2 Seq+ 39314 ChimerSeq STARFusion TCGA_RNA-Seq C19orf12-GLYATL2 C19orf12 chr19 30199161 - GLYATL2 chr11 58611997 - Exonic hg19 OV TCGA-09-0366-01A 26 37 CDS-5'UTR Inter-chr q12 q12.1 Seq+ 39315 ChimerSeq STARFusion TCGA_RNA-Seq ENSA-SEC22B ENSA chr1 150598118 - SEC22B chr1 145109524 + Exonic hg19 OV TCGA-09-0366-01A 31 14 In-Frame Intra-chr q21.3 p12 Seq+ 39316 ChimerSeq STARFusion TCGA_RNA-Seq C19orf12-GLYATL2 C19orf12 chr19 30206032 - GLYATL2 chr11 58611997 - Exonic hg19 OV TCGA-09-0366-01A 19 37 5'UTR-5'UTR Inter-chr q12 q12.1 Seq+ 39317 ChimerSeq STARFusion TCGA_RNA-Seq C19orf12-GLYATL2 C19orf12 chr19 30206032 - GLYATL2 chr11 58607125 - Exonic hg19 OV TCGA-09-0366-01A 3 37 5'UTR-5'UTR Inter-chr q12 q12.1 Seq+ 39318 ChimerSeq STARFusion TCGA_RNA-Seq ZNF329-KLK10 ZNF329 chr19 58666102 - KLK10 chr19 51519412 - Exonic hg19 OV TCGA-09-0366-01A 5 15 5'UTR-CDS Intra-chr q13.43 Transcription factor q13.41 Tumor suppressor gene 39319 ChimerSeq STARFusion TCGA_RNA-Seq ZNF329-KLK10 ZNF329 chr19 58666102 - KLK10 chr19 51518806 - Exonic hg19 OV TCGA-09-0366-01A 3 15 5'UTR-CDS Intra-chr q13.43 Transcription factor q13.41 Tumor suppressor gene 39320 ChimerSeq STARFusion TCGA_RNA-Seq TCF3-REXO1 TCF3 chr19 1619110 - REXO1 chr19 1815485 - Exonic hg19 OV TCGA-04-1357-01A 60 12 CDS-3'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p13.3 Seq+ 39321 ChimerSeq STARFusion TCGA_RNA-Seq TCF3-REXO1 TCF3 chr19 1619110 - REXO1 chr19 1815847 - Exonic hg19 OV TCGA-04-1357-01A 23 12 CDS-3'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p13.3 Seq+ 39322 ChimerSeq STARFusion TCGA_RNA-Seq RPS17-CD74 RPS17 chr15 82823333 - CD74 chr5 149792312 - Exonic hg19 OV TCGA-04-1357-01A 7 1 Out-of-frame Inter-chr q25.2 q33.1 39323 ChimerSeq STARFusion TCGA_RNA-Seq SCMH1-TRAPPC3 SCMH1 chr1 41707731 - TRAPPC3 chr1 36605767 - Exonic hg19 OV TCGA-25-2400-01A 256 27 5'UTR-CDS Intra-chr p34.2 Transcription factor p34.3 Seq+ 39324 ChimerSeq STARFusion TCGA_RNA-Seq NECAP2-EPHA2 NECAP2 chr1 16775696 + EPHA2 chr1 16456914 - Exonic hg19 OV TCGA-25-2400-01A 44 14 In-Frame Intra-chr p36.13 p36.13 Tumor suppressor gene Seq+ 39325 ChimerSeq STARFusion TCGA_RNA-Seq USP34-FAM178B USP34 chr2 61697785 - FAM178B chr2 97613639 - Exonic hg19 OV TCGA-25-2400-01A 45 6 Out-of-frame Intra-chr p15 q11.2 Seq+ 39326 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-25-2400-01A 40 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 39327 ChimerSeq STARFusion TCGA_RNA-Seq CDH6-SKP2 CDH6 chr5 31193993 + SKP2 chr5 36152873 + Exonic hg19 OV TCGA-25-2400-01A 33 4 5'UTR-5'UTR Intra-chr p13.3 p13.2 Tumor suppressor gene Seq+ 39328 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-25-2400-01A 26 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39329 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-25-2400-01A 26 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39330 ChimerSeq STARFusion TCGA_RNA-Seq ERGIC1-RANBP17 ERGIC1 chr5 172351112 + RANBP17 chr5 170588411 + Exonic hg19 OV TCGA-25-2400-01A 14 1 Out-of-frame Intra-chr q35.1 q35.1 Seq+ 39331 ChimerSeq STARFusion TCGA_RNA-Seq ERGIC1-RANBP17 ERGIC1 chr5 172351112 + RANBP17 chr5 170597134 + Exonic hg19 OV TCGA-25-2400-01A 12 1 In-Frame Intra-chr q35.1 q35.1 Seq+ 39332 ChimerSeq STARFusion TCGA_RNA-Seq ST14-LINC00964 ST14 chr11 130029955 + LINC00964 chr8 125953705 + Exonic hg19 OV TCGA-04-1361-01A 120 17 Out-of-frame Inter-chr q24.3 q24.13 39333 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB7C-SCFD2 ZBTB7C chr18 45712305 - SCFD2 chr4 54140168 - Exonic hg19 OV TCGA-04-1361-01A 38 7 5'UTR-CDS Inter-chr q21.1 Tumor suppressor gene Transcription factor q12 Seq+ 39334 ChimerSeq STARFusion TCGA_RNA-Seq SNHG12-ESRP1 SNHG12 chr1 28908102 - ESRP1 chr8 95690431 + Exonic hg19 OV TCGA-04-1361-01A 25 11 3'UTR-CDS Inter-chr p35.3 q22.1 Tumor suppressor gene Seq+ 39335 ChimerSeq STARFusion TCGA_RNA-Seq NADK-MROH1 NADK chr1 1696667 - MROH1 chr8 145245687 + Exonic hg19 OV TCGA-04-1361-01A 21 7 Out-of-frame Inter-chr p36.33 q24.3 Seq+ 39336 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-04-1361-01A 20 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39337 ChimerSeq STARFusion TCGA_RNA-Seq SNHG12-ESRP1 SNHG12 chr1 28908102 - ESRP1 chr8 95686536 + Exonic hg19 OV TCGA-04-1361-01A 8 11 3'UTR-CDS Inter-chr p35.3 q22.1 Tumor suppressor gene Seq+ 39338 ChimerSeq STARFusion TCGA_RNA-Seq SNHG12-ESRP1 SNHG12 chr1 28907507 - ESRP1 chr8 95683739 + Exonic hg19 OV TCGA-04-1361-01A 5 11 Out-of-frame Inter-chr p35.3 q22.1 Tumor suppressor gene Seq+ 39339 ChimerSeq STARFusion TCGA_RNA-Seq SNHG12-ESRP1 SNHG12 chr1 28907623 - ESRP1 chr8 95690431 + Exonic hg19 OV TCGA-04-1361-01A 4 11 3'UTR-CDS Inter-chr p35.3 q22.1 Tumor suppressor gene Seq+ 39340 ChimerSeq STARFusion TCGA_RNA-Seq SNHG12-ESRP1 SNHG12 chr1 28907623 - ESRP1 chr8 95686536 + Exonic hg19 OV TCGA-04-1361-01A 4 11 3'UTR-CDS Inter-chr p35.3 q22.1 Tumor suppressor gene Seq+ 39341 ChimerSeq STARFusion TCGA_RNA-Seq POLA1-TSPAN7 POLA1 chrX 24767109 + TSPAN7 chrX 38525375 + Exonic hg19 OV TCGA-13-1407-01A 15 14 In-Frame Intra-chr p22.11 p11.4 Seq+ 39342 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-PLEKHG4 CBFB chr16 67116211 + PLEKHG4 chr16 67312644 + Exonic hg19 OV TCGA-13-1407-01A 9 9 CDS-5'UTR Intra-chr q22.1 q22.1 Seq+ 39343 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-PLEKHG4 CBFB chr16 67116211 + PLEKHG4 chr16 67311680 + Exonic hg19 OV TCGA-13-1407-01A 7 9 CDS-5'UTR Intra-chr q22.1 q22.1 Seq+ 39344 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-PLEKHG4 CBFB chr16 67116211 + PLEKHG4 chr16 67314028 + Exonic hg19 OV TCGA-13-1407-01A 3 9 In-Frame Intra-chr q22.1 q22.1 Seq+ 39345 ChimerSeq STARFusion TCGA_RNA-Seq ACAP2-APOD ACAP2 chr3 195101738 - APOD chr3 195300842 - Exonic hg19 OV TCGA-24-2262-01A 350 35 In-Frame Intra-chr q29 q29 Seq+ 39346 ChimerSeq STARFusion TCGA_RNA-Seq SDHAF2-CD5 SDHAF2 chr11 61197654 + CD5 chr11 60891356 + Exonic hg19 OV TCGA-24-2262-01A 87 2 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 39347 ChimerSeq STARFusion TCGA_RNA-Seq SDHAF2-CD5 SDHAF2 chr11 61197654 + CD5 chr11 60890379 + Exonic hg19 OV TCGA-24-2262-01A 48 2 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 39348 ChimerSeq STARFusion TCGA_RNA-Seq USP54-CASC2 USP54 chr10 75296027 - CASC2 chr10 119857707 + Exonic hg19 OV TCGA-24-2262-01A 32 1 CDS-5'UTR Intra-chr q22.2 q26.11 Tumor suppressor gene Seq+ 39349 ChimerSeq STARFusion TCGA_RNA-Seq VTI1A-GTF2H5 VTI1A chr10 114298089 + GTF2H5 chr6 158613009 + Exonic hg19 OV TCGA-24-2262-01A 27 2 Out-of-frame Inter-chr q25.2 q25.3 Seq+ 39350 ChimerSeq STARFusion TCGA_RNA-Seq MARK2-C11orf84 MARK2 chr11 63672515 + C11orf84 chr11 63594400 + Exonic hg19 OV TCGA-24-2262-01A 18 9 Out-of-frame Intra-chr q13.1 CAMK:CAMKL q13.1 Seq+ 39351 ChimerSeq STARFusion TCGA_RNA-Seq RANBP2-SULT1C3 RANBP2 chr2 109375004 + SULT1C3 chr2 108869801 + Exonic hg19 OV TCGA-24-2262-01A 17 1 In-Frame Intra-chr q13 q12.3 Seq+ 39352 ChimerSeq STARFusion TCGA_RNA-Seq USP54-CASC2 USP54 chr10 75296027 - CASC2 chr10 119966034 + Exonic hg19 OV TCGA-24-2262-01A 12 1 CDS-5'UTR Intra-chr q22.2 q26.11 Tumor suppressor gene Seq+ 39353 ChimerSeq STARFusion TCGA_RNA-Seq ASH1L-C1orf61 ASH1L chr1 155490891 - C1orf61 chr1 156399911 - Exonic hg19 OV TCGA-24-2262-01A 11 2 CDS-5'UTR Intra-chr q22 Transcription factor q22 Seq+ 39354 ChimerSeq STARFusion TCGA_RNA-Seq TRADD-GFOD2 TRADD chr16 67193741 - GFOD2 chr16 67719705 - Exonic hg19 OV TCGA-24-2262-01A 11 1 5'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 39355 ChimerSeq STARFusion TCGA_RNA-Seq PAK1-GAB2 PAK1 chr11 77184597 - GAB2 chr11 77991947 - Exonic hg19 OV TCGA-24-2262-01A 10 0 5'UTR-5'UTR Intra-chr q14.1 STE:STE20 q14.1 Seq+ 39356 ChimerSeq STARFusion TCGA_RNA-Seq DVL2-CST6 DVL2 chr17 7134047 - CST6 chr11 65779657 + Exonic hg19 OV TCGA-24-2262-01A 9 3 In-Frame Inter-chr p13.1 q13.1 Tumor suppressor gene Seq+ 39357 ChimerSeq STARFusion TCGA_RNA-Seq NDC1-HSPB11 NDC1 chr1 54252831 - HSPB11 chr1 54395818 - Exonic hg19 OV TCGA-24-2262-01A 9 0 Out-of-frame Intra-chr p32.3 p32.3 39358 ChimerSeq STARFusion TCGA_RNA-Seq RNF19A-KHDRBS2 RNF19A chr8 101322095 - KHDRBS2 chr6 62887217 - Exonic hg19 OV TCGA-24-2262-01A 8 1 5'UTR-CDS Inter-chr q22.2 q11.1 Seq+ 39359 ChimerSeq STARFusion TCGA_RNA-Seq ADAM10-MYO1E ADAM10 chr15 59009776 - MYO1E chr15 59480415 - Exonic hg19 OV TCGA-24-2262-01A 7 2 3'UTR-CDS Intra-chr q21.3 q22.2 Seq+ 39360 ChimerSeq STARFusion TCGA_RNA-Seq PISD-PRR14L PISD chr22 32044087 - PRR14L chr22 32081789 - Exonic hg19 OV TCGA-24-2262-01A 7 2 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 39361 ChimerSeq STARFusion TCGA_RNA-Seq POLR2C-HS3ST4 POLR2C chr16 57496990 + HS3ST4 chr16 26146933 + Exonic hg19 OV TCGA-24-2262-01A 7 2 Out-of-frame Intra-chr q21 p12.1 Seq+ 39362 ChimerSeq STARFusion TCGA_RNA-Seq STRBP-DENND1A STRBP chr9 126030715 - DENND1A chr9 126220176 - Exonic hg19 OV TCGA-24-2262-01A 6 3 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 39363 ChimerSeq STARFusion TCGA_RNA-Seq PCBP2-FGR PCBP2 chr12 53865591 + FGR chr1 27951662 - Exonic hg19 OV TCGA-24-2262-01A 6 2 CDS-5'UTR Inter-chr q13.13 p35.3 TK:Src Seq+ 39364 ChimerSeq STARFusion TCGA_RNA-Seq USB1-MAPKAPK5 USB1 chr16 58051343 + MAPKAPK5 chr12 112308889 + Exonic hg19 OV TCGA-24-2262-01A 6 2 Out-of-frame Inter-chr q21 q24.12 CAMK:MAPKAPK Seq+ 39365 ChimerSeq STARFusion TCGA_RNA-Seq CASC4-YIF1A CASC4 chr15 44581554 + YIF1A chr11 66055387 - Exonic hg19 OV TCGA-24-2262-01A 6 1 In-Frame Inter-chr q15.3 q13.2 Seq+ 39366 ChimerSeq STARFusion TCGA_RNA-Seq APAF1-TMPO APAF1 chr12 99056584 + TMPO chr12 98931253 + Exonic hg19 OV TCGA-24-2262-01A 5 4 In-Frame Intra-chr q23.1 Tumor suppressor gene q23.1 Seq+ 39367 ChimerSeq STARFusion TCGA_RNA-Seq PISD-PRR14L PISD chr22 32021749 - PRR14L chr22 32081789 - Exonic hg19 OV TCGA-24-2262-01A 5 2 In-Frame Intra-chr q12.2 q12.2 Seq+ 39368 ChimerSeq STARFusion TCGA_RNA-Seq SRM-MTOR SRM chr1 11118857 - MTOR chr1 11227574 - Exonic hg19 OV TCGA-24-2262-01A 5 2 Out-of-frame Intra-chr p36.22 TK:Src p36.22 Oncogene Seq+ 39369 ChimerSeq STARFusion TCGA_RNA-Seq THRAP3-AGO1 THRAP3 chr1 36748301 + AGO1 chr1 36358158 + Exonic hg19 OV TCGA-24-2262-01A 5 1 Out-of-frame Intra-chr p34.3 p34.3 39370 ChimerSeq STARFusion TCGA_RNA-Seq ASH1L-C1orf61 ASH1L chr1 155490891 - C1orf61 chr1 156374393 - Exonic hg19 OV TCGA-24-2262-01A 4 2 In-Frame Intra-chr q22 Transcription factor q22 Seq+ 39371 ChimerSeq STARFusion TCGA_RNA-Seq PCBP2-FGR PCBP2 chr12 53865591 + FGR chr1 27967635 - Exonic hg19 OV TCGA-24-2262-01A 4 2 CDS-5'UTR Inter-chr q13.13 p35.3 TK:Src Seq+ 39372 ChimerSeq STARFusion TCGA_RNA-Seq GOLPH3L-HORMAD1 GOLPH3L chr1 150669468 - HORMAD1 chr1 150679285 - Exonic hg19 OV TCGA-13-0905-01B 123 56 5'UTR-CDS Intra-chr q21.3 q21.3 Seq+ 39373 ChimerSeq STARFusion TCGA_RNA-Seq GOLPH3L-HORMAD1 GOLPH3L chr1 150669468 - HORMAD1 chr1 150681437 - Exonic hg19 OV TCGA-13-0905-01B 113 36 5'UTR-CDS Intra-chr q21.3 q21.3 Seq+ 39374 ChimerSeq STARFusion TCGA_RNA-Seq CAT-CD3D CAT chr11 34460626 + CD3D chr11 118210209 - Exonic hg19 OV TCGA-13-0905-01B 104 67 Out-of-frame Intra-chr p13 Tumor suppressor gene q23.3 Seq+ 39375 ChimerSeq STARFusion TCGA_RNA-Seq BSG-CFD BSG chr19 574631 + CFD chr19 861773 + Exonic hg19 OV TCGA-13-0905-01B 63 4 Out-of-frame Intra-chr p13.3 p13.3 39376 ChimerSeq STARFusion TCGA_RNA-Seq CAT-CD3D CAT chr11 34460626 + CD3D chr11 118210621 - Exonic hg19 OV TCGA-13-0905-01B 20 67 Out-of-frame Intra-chr p13 Tumor suppressor gene q23.3 Seq+ 39377 ChimerSeq STARFusion TCGA_RNA-Seq TTC7B-PPP1R21 TTC7B chr14 91142867 - PPP1R21 chr2 48734408 + Exonic hg19 OV TCGA-13-0905-01B 21 7 In-Frame Inter-chr q32.11 p16.3 39378 ChimerSeq STARFusion TCGA_RNA-Seq RPAP3-ENDOU RPAP3 chr12 48099735 - ENDOU chr12 48111977 - Exonic hg19 OV TCGA-13-0905-01B 14 0 5'UTR-CDS Intra-chr q13.11 q13.11 39379 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R21-TTC7B PPP1R21 chr2 48737252 + TTC7B chr14 91124731 - Exonic hg19 OV TCGA-13-0905-01B 10 6 In-Frame Inter-chr p16.3 q32.11 Seq+ 39380 ChimerSeq STARFusion TCGA_RNA-Seq CLDN16-C10orf11 CLDN16 chr3 190040450 + C10orf11 chr10 78084159 + Exonic hg19 OV TCGA-13-0905-01B 10 4 5'UTR-CDS Inter-chr q28 39381 ChimerSeq STARFusion TCGA_RNA-Seq POM121C-ZP3 POM121C chr7 75070232 - ZP3 chr7 76063355 + Exonic hg19 OV TCGA-13-0905-01B 2 14 In-Frame Intra-chr q11.23 q11.23 39382 ChimerSeq STARFusion TCGA_RNA-Seq TGFA-FAM136A TGFA chr2 70741991 - FAM136A chr2 70528112 - Exonic hg19 OV TCGA-30-1862-01A 14 2 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 39383 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-30-1862-01A 13 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 39384 ChimerSeq STARFusion TCGA_RNA-Seq ARID1A-FAM76A ARID1A chr1 27024031 + FAM76A chr1 28053983 + Exonic hg19 OV TCGA-30-1862-01A 10 7 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p35.3 Seq+ 39385 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-30-1862-01A 10 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39386 ChimerSeq STARFusion TCGA_RNA-Seq FLJ00418-IL34 FLJ00418 chr16 70696140 + IL34 chr16 70680451 + Exonic hg19 OV TCGA-30-1862-01A 8 1 Out-of-frame Intra-chr q22.1 39387 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF4-TTLL9 TM9SF4 chr20 30737569 + TTLL9 chr20 30512812 + Exonic hg19 OV TCGA-30-1862-01A 7 4 In-Frame Intra-chr q11.21 q11.21 Seq+ 39388 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF4-TTLL9 TM9SF4 chr20 30737569 + TTLL9 chr20 30510766 + Exonic hg19 OV TCGA-30-1862-01A 6 4 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 39389 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF4-TTLL9 TM9SF4 chr20 30734658 + TTLL9 chr20 30510766 + Exonic hg19 OV TCGA-30-1862-01A 4 4 In-Frame Intra-chr q11.21 q11.21 Seq+ 39390 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-1549-01A 53 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39391 ChimerSeq STARFusion TCGA_RNA-Seq CMTM7-METTL2B CMTM7 chr3 32433557 + METTL2B chr7 128119212 + Exonic hg19 OV TCGA-24-1549-01A 41 16 Out-of-frame Inter-chr p22.3 q32.1 Seq+ 39392 ChimerSeq STARFusion TCGA_RNA-Seq VGLL4-TAMM41 VGLL4 chr3 11744445 - TAMM41 chr3 11885685 - Exonic hg19 OV TCGA-24-1549-01A 36 23 Out-of-frame Intra-chr p25.2 p25.2 Seq+ 39393 ChimerSeq STARFusion TCGA_RNA-Seq SKAP1-SP2 SKAP1 chr17 46423267 - SP2 chr17 45992678 + Exonic hg19 OV TCGA-24-1549-01A 29 8 In-Frame Intra-chr q21.32 q21.32 Transcription factor Seq+ 39394 ChimerSeq STARFusion TCGA_RNA-Seq METAP1D-HAT1 METAP1D chr2 172864916 + HAT1 chr2 172841096 + Exonic hg19 OV TCGA-24-1549-01A 26 0 In-Frame Intra-chr q31.1 q31.1 Seq+ 39395 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1958-SETD4 KIAA1958 chr9 115249398 + SETD4 chr21 37431222 - Exonic hg19 OV TCGA-24-1549-01A 19 8 5'UTR-5'UTR Inter-chr q32 q22.12 Seq+ 39396 ChimerSeq STARFusion TCGA_RNA-Seq ZMIZ1-LINC00856 ZMIZ1 chr10 80976031 + LINC00856 chr10 80434446 + Exonic hg19 OV TCGA-24-1549-01A 19 4 Out-of-frame Intra-chr q22.3 q22.3 39397 ChimerSeq STARFusion TCGA_RNA-Seq TPST1-CRCP TPST1 chr7 65670509 + CRCP chr7 65610430 + Exonic hg19 OV TCGA-24-1549-01A 16 4 5'UTR-5'UTR Intra-chr q11.21 q11.21 39398 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-24-1549-01A 13 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 39399 ChimerSeq STARFusion TCGA_RNA-Seq MAGI3-DENND5A MAGI3 chr1 113933971 + DENND5A chr11 9161401 - Exonic hg19 OV TCGA-24-1549-01A 10 3 In-Frame Inter-chr p13.2 p15.4 Seq+ 39400 ChimerSeq STARFusion TCGA_RNA-Seq CMTM7-METTL2B CMTM7 chr3 32433557 + METTL2B chr7 128117136 + Exonic hg19 OV TCGA-24-1549-01A 6 16 Out-of-frame Inter-chr p22.3 q32.1 Seq+ 39401 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-24-1549-01A 10 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39402 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1958-SETD4 KIAA1958 chr9 115249398 + SETD4 chr21 37431271 - Exonic hg19 OV TCGA-24-1549-01A 2 8 5'UTR-5'UTR Inter-chr q32 q22.12 Seq+ 39403 ChimerSeq STARFusion TCGA_RNA-Seq CABIN1-CTNNBIP1 CABIN1 chr22 24509715 + CTNNBIP1 chr1 9910834 - Exonic hg19 OV TCGA-13-0725-01A 20 6 In-Frame Inter-chr p36.22 Tumor suppressor gene 39404 ChimerSeq STARFusion TCGA_RNA-Seq C9orf3-TNC C9orf3 chr9 97767898 + TNC chr9 117793964 - Exonic hg19 OV TCGA-13-0725-01A 7 0 In-Frame Intra-chr q22.32 q33.1 39405 ChimerSeq STARFusion TCGA_RNA-Seq AFAP1-ABLIM2 AFAP1 chr4 7941383 - ABLIM2 chr4 7985071 - Exonic hg19 OV TCGA-25-1312-01A 17 2 5'UTR-CDS Intra-chr p16.1 p16.1 Seq+ 39406 ChimerSeq STARFusion TCGA_RNA-Seq ENOX1-RAD51B ENOX1 chr13 44360788 - RAD51B chr14 68934889 + Exonic hg19 OV TCGA-25-1312-01A 13 5 5'UTR-CDS Inter-chr q14.11 q24.1 Seq+ 39407 ChimerSeq STARFusion TCGA_RNA-Seq ATP2B4-OPTC ATP2B4 chr1 203596347 + OPTC chr1 203466105 + Exonic hg19 OV TCGA-25-1312-01A 12 8 5'UTR-CDS Intra-chr q32.1 q32.1 Seq+ 39408 ChimerSeq STARFusion TCGA_RNA-Seq ST6GAL1-EIF4A2 ST6GAL1 chr3 186769134 + EIF4A2 chr3 186505284 + Exonic hg19 OV TCGA-25-1312-01A 13 0 In-Frame Intra-chr q27.3 q27.3 39409 ChimerSeq STARFusion TCGA_RNA-Seq MAST1-TNFRSF19 MAST1 chr19 12951880 + TNFRSF19 chr13 24190006 + Exonic hg19 OV TCGA-25-1312-01A 11 2 Out-of-frame Inter-chr p13.13 AGC:MAST q12.12 Seq+ 39410 ChimerSeq STARFusion TCGA_RNA-Seq DVL1-MXRA8 DVL1 chr1 1283256 - MXRA8 chr1 1290266 - Exonic hg19 OV TCGA-25-1312-01A 10 1 Out-of-frame Intra-chr p36.33 p36.33 39411 ChimerSeq STARFusion TCGA_RNA-Seq NRIP1-SH3BGR NRIP1 chr21 16386665 - SH3BGR chr21 40834301 + Exonic hg19 OV TCGA-25-1312-01A 8 1 5'UTR-5'UTR Intra-chr q21.1 q22.2 Seq+ 39412 ChimerSeq STARFusion TCGA_RNA-Seq EEF1G-BSCL2 EEF1G chr11 62338437 - BSCL2 chr11 62462183 - Exonic hg19 OV TCGA-24-0979-01A 17 1 In-Frame Intra-chr q12.3 q12.3 Seq+ 39413 ChimerSeq STARFusion TCGA_RNA-Seq MIR3654-BSCL2 MIR3654 chr11 62338437 - BSCL2 chr11 62462183 - Exonic hg19 OV TCGA-24-0979-01A 17 1 5'UTR-CDS Intra-chr q33 q12.3 39414 ChimerSeq STARFusion TCGA_RNA-Seq NDUFAF6-BCAS4 NDUFAF6 chr8 95970407 + BCAS4 chr20 49493023 + Exonic hg19 OV TCGA-10-0937-01A 12 5 Out-of-frame Inter-chr q22.1 q13.13 Seq+ 39415 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-10-0937-01A 12 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39416 ChimerSeq STARFusion TCGA_RNA-Seq SLBP-TMEM129 SLBP chr4 1713601 - TMEM129 chr4 1720353 - Exonic hg19 OV TCGA-10-0937-01A 9 6 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 39417 ChimerSeq STARFusion TCGA_RNA-Seq SMIM13-C7orf49 SMIM13 chr6 11094622 + C7orf49 chr7 134779334 - Exonic hg19 OV TCGA-10-0937-01A 5 1 Out-of-frame Inter-chr p24.2 q33 Seq+ 39418 ChimerSeq STARFusion TCGA_RNA-Seq LYPLA1-TPD52 LYPLA1 chr8 55013468 - TPD52 chr8 80954903 - Exonic hg19 OV TCGA-20-1686-01A 64 6 In-Frame Intra-chr q11.23 q21.13 Seq+ 39419 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-SCGB1B2P TNRC6B chr22 40608064 + SCGB1B2P chr19 35068600 - Exonic hg19 OV TCGA-20-1686-01A 51 6 Out-of-frame Inter-chr q13.1 q13.11 Seq+ 39420 ChimerSeq STARFusion TCGA_RNA-Seq NOS2-AATF NOS2 chr17 26107793 - AATF chr17 35413901 + Exonic hg19 OV TCGA-20-1686-01A 51 1 In-Frame Intra-chr q11.2 Seq+ 39421 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-LSM1 WHSC1L1 chr8 38239317 - LSM1 chr8 38021358 - Exonic hg19 OV TCGA-20-1686-01A 15 0 5'UTR-CDS Intra-chr p11.23 Tumor suppressor gene p11.23 Seq+ 39422 ChimerSeq STARFusion TCGA_RNA-Seq TADA2A-SPACA3 TADA2A chr17 35783715 + SPACA3 chr17 31302845 + Exonic hg19 OV TCGA-20-1686-01A 14 1 CDS-5'UTR Intra-chr q12 q11.2 Seq+ 39423 ChimerSeq STARFusion TCGA_RNA-Seq RPH3AL-EIF5A RPH3AL chr17 65445 - EIF5A chr17 7212934 + Exonic hg19 OV TCGA-20-1686-01A 11 1 In-Frame Intra-chr p13.1 39424 ChimerSeq STARFusion TCGA_RNA-Seq ACACA-SSH2 ACACA chr17 35486291 - SSH2 chr17 28252573 - Exonic hg19 OV TCGA-20-1686-01A 9 1 Out-of-frame Intra-chr q11.2 Seq+ 39425 ChimerSeq STARFusion TCGA_RNA-Seq USP11-FUNDC1 USP11 chrX 47101098 + FUNDC1 chrX 44386611 - Exonic hg19 OV TCGA-20-1686-01A 8 0 In-Frame Intra-chr p11.3 p11.3 39426 ChimerSeq STARFusion TCGA_RNA-Seq IRF3-BCL2L12 IRF3 chr19 50163970 - BCL2L12 chr19 50169942 + Exonic hg19 OV TCGA-13-0762-01A 23 18 In-Frame Intra-chr q13.33 Tumor suppressor gene Transcription factor q13.33 Seq+ 39427 ChimerSeq STARFusion TCGA_RNA-Seq TKT-GPBP1 TKT chr3 53274267 - GPBP1 chr5 56557007 + Exonic hg19 OV TCGA-13-0762-01A 25 10 In-Frame Inter-chr p21.1 Tumor suppressor gene q11.2 Transcription factor Seq+ 39428 ChimerSeq STARFusion TCGA_RNA-Seq KAT6B-ADK KAT6B chr10 76603236 + ADK chr10 76468079 + Exonic hg19 OV TCGA-13-0762-01A 24 9 Out-of-frame Intra-chr Oncogene q22.2 Seq+ 39429 ChimerSeq STARFusion TCGA_RNA-Seq CPNE2-FAM192A CPNE2 chr16 57126702 + FAM192A chr16 57197977 - Exonic hg19 OV TCGA-61-1728-01A 120 14 5'UTR-CDS Intra-chr q13 q13 Seq+ 39430 ChimerSeq STARFusion TCGA_RNA-Seq DAB2IP-SLC44A4 DAB2IP chr9 124533003 + SLC44A4 chr6 31837414 - Exonic hg19 OV TCGA-61-1728-01A 119 16 In-Frame Inter-chr q33.2 Tumor suppressor gene Seq+ 39431 ChimerSeq STARFusion TCGA_RNA-Seq MYO9B-ZNF430 MYO9B chr19 17186684 + ZNF430 chr19 21239437 + Exonic hg19 OV TCGA-61-1728-01A 78 10 5'UTR-CDS Intra-chr p13.11 Transcription factor Seq+ 39432 ChimerSeq STARFusion TCGA_RNA-Seq AURKA-SOGA1 AURKA chr20 54956489 - SOGA1 chr20 35445872 - Exonic hg19 OV TCGA-61-1728-01A 59 5 In-Frame Intra-chr q13.2 Oncogene q11.23 Seq+ 39433 ChimerSeq STARFusion TCGA_RNA-Seq MED26-SLC1A6 MED26 chr19 16738683 - SLC1A6 chr19 15083729 - Exonic hg19 OV TCGA-61-1728-01A 50 6 CDS-5'UTR Intra-chr p13.11 p13.12 Seq+ 39434 ChimerSeq STARFusion TCGA_RNA-Seq CYSTM1-MATR3 CYSTM1 chr5 139554870 + MATR3 chr5 138654597 + Exonic hg19 OV TCGA-61-1728-01A 22 13 5'UTR-5'UTR Intra-chr q31.3 q31.2 Seq+ 39435 ChimerSeq STARFusion TCGA_RNA-Seq MED26-SLC1A6 MED26 chr19 16738683 - SLC1A6 chr19 15075173 - Exonic hg19 OV TCGA-61-1728-01A 19 6 Out-of-frame Intra-chr p13.11 p13.12 Seq+ 39436 ChimerSeq STARFusion TCGA_RNA-Seq MED26-SLC1A6 MED26 chr19 16738683 - SLC1A6 chr19 15067521 - Exonic hg19 OV TCGA-61-1728-01A 18 6 Out-of-frame Intra-chr p13.11 p13.12 Seq+ 39437 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-61-1728-01A 18 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39438 ChimerSeq STARFusion TCGA_RNA-Seq DARS-R3HDM1 DARS chr2 136668709 - R3HDM1 chr2 136481507 + Exonic hg19 OV TCGA-61-1728-01A 17 3 In-Frame Intra-chr q21.3 q21.3 Seq+ 39439 ChimerSeq STARFusion TCGA_RNA-Seq ZFHX3-DLG2 ZFHX3 chr16 73092429 - DLG2 chr11 84245774 - Exonic hg19 OV TCGA-61-1728-01A 12 3 5'UTR-CDS Inter-chr q22.3 Tumor suppressor gene Transcription factor q14.1 Seq+ 39440 ChimerSeq STARFusion TCGA_RNA-Seq AKT2-CXCL11 AKT2 chr19 40791088 - CXCL11 chr4 76957217 - Exonic hg19 OV TCGA-25-1635-01A 26 8 5'UTR-5'UTR Inter-chr q13.2 AGC:Akt Oncogene q21.1 Seq+ 39441 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-25-1635-01A 27 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39442 ChimerSeq STARFusion TCGA_RNA-Seq PARD3-CAMK1D PARD3 chr10 34739245 - CAMK1D chr10 12708735 + Exonic hg19 OV TCGA-25-1635-01A 25 6 Out-of-frame Intra-chr p11.21 p13 Seq+ 39443 ChimerSeq STARFusion TCGA_RNA-Seq CCDC37-BCAM CCDC37 chr3 126152026 + BCAM chr19 45322835 + Exonic hg19 OV TCGA-25-1635-01A 16 0 Out-of-frame Inter-chr q13.32 39444 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-GSPT1 FTH1 chr11 61734943 - GSPT1 chr16 12009555 - Exonic hg19 OV TCGA-25-1635-01A 11 0 Out-of-frame Inter-chr q12.3 p13.13 39445 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-25-1635-01A 10 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 39446 ChimerSeq STARFusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2017353 - COL1A1 chr17 48264063 - Exonic hg19 OV TCGA-25-1635-01A 5 17 Out-of-frame Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 39447 ChimerSeq STARFusion TCGA_RNA-Seq ZNF589-HMCES ZNF589 chr3 48282704 + HMCES chr3 129017197 + Exonic hg19 OV TCGA-24-1436-01A 17 22 Out-of-frame Intra-chr p21.31 Transcription factor q21.3 Seq+ 39448 ChimerSeq STARFusion TCGA_RNA-Seq BTBD2-SBNO2 BTBD2 chr19 2013546 - SBNO2 chr19 1127764 - Exonic hg19 OV TCGA-24-1436-01A 16 12 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 39449 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT1-GPR125 B4GALT1 chr9 33166756 - GPR125 chr4 22475466 - Exonic hg19 OV TCGA-24-1436-01A 13 2 Out-of-frame Inter-chr p21.1 39450 ChimerSeq STARFusion TCGA_RNA-Seq BTBD2-SBNO2 BTBD2 chr19 2015296 - SBNO2 chr19 1127764 - Exonic hg19 OV TCGA-24-1436-01A 7 12 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 39451 ChimerSeq STARFusion TCGA_RNA-Seq HSPA8-GRIK5 HSPA8 chr11 122932772 - GRIK5 chr19 42546907 - Exonic hg19 OV TCGA-20-1685-01A 436 17 5'UTR-CDS Inter-chr q24.1 q13.2 Seq+ 39452 ChimerSeq STARFusion TCGA_RNA-Seq HSP90B1-TEX261 HSP90B1 chr12 104324342 + TEX261 chr2 71219113 - Exonic hg19 OV TCGA-20-1685-01A 143 6 Out-of-frame Inter-chr q23.3 Tumor suppressor gene p13.3 Seq+ 39453 ChimerSeq STARFusion TCGA_RNA-Seq MIR3652-TEX261 MIR3652 chr12 104324342 + TEX261 chr2 71219113 - Exonic hg19 OV TCGA-20-1685-01A 143 6 3'UTR-CDS Inter-chr q23.3 p13.3 39454 ChimerSeq STARFusion TCGA_RNA-Seq CDK2AP1-KCNQ1 CDK2AP1 chr12 123756111 - KCNQ1 chr11 2790074 + Exonic hg19 OV TCGA-20-1685-01A 42 8 Out-of-frame Inter-chr q24.31 Tumor suppressor gene p15.5 Seq+ 39455 ChimerSeq STARFusion TCGA_RNA-Seq GPC1-RPL28 GPC1 chr2 241392439 + RPL28 chr19 55897716 + Exonic hg19 OV TCGA-20-1685-01A 24 0 Out-of-frame Inter-chr q37.3 q13.42 39456 ChimerSeq STARFusion TCGA_RNA-Seq MID1-SPAG17 MID1 chrX 10450520 - SPAG17 chr1 118598537 - Exonic hg19 OV TCGA-20-1685-01A 21 4 In-Frame Inter-chr p22.2 p12 Seq+ 39457 ChimerSeq STARFusion TCGA_RNA-Seq VMP1-CLTC VMP1 chr17 57785109 + CLTC chr17 57771089 + Exonic hg19 OV TCGA-30-1861-01A 53 7 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 39458 ChimerSeq STARFusion TCGA_RNA-Seq DOPEY1-SMIM8 DOPEY1 chr6 83777498 + SMIM8 chr6 88046727 + Exonic hg19 OV TCGA-30-1861-01A 50 10 Out-of-frame Intra-chr q14.1 q15 Seq+ 39459 ChimerSeq STARFusion TCGA_RNA-Seq TGFBR3-LRTM1 TGFBR3 chr1 92174220 - LRTM1 chr3 54959242 - Exonic hg19 OV TCGA-30-1861-01A 29 1 In-Frame Inter-chr p22.1 Tumor suppressor gene p14.3 Seq+ 39460 ChimerSeq STARFusion TCGA_RNA-Seq SETD2-MRPL44 SETD2 chr3 47205344 - MRPL44 chr2 224824251 + Exonic hg19 OV TCGA-30-1861-01A 22 1 In-Frame Inter-chr p21.31 Oncogene Tumor suppressor gene q36.1 Seq+ 39461 ChimerSeq STARFusion TCGA_RNA-Seq DOK5-TSHZ2 DOK5 chr20 53092551 + TSHZ2 chr20 52103683 + Exonic hg19 OV TCGA-30-1861-01A 17 0 CDS-3'UTR Intra-chr q13.2 q13.2 Transcription factor Seq+ 39462 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-30-1861-01A 13 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39463 ChimerSeq STARFusion TCGA_RNA-Seq RIPK1-SERPINB9 RIPK1 chr6 3064293 + SERPINB9 chr6 2900855 - Exonic hg19 OV TCGA-30-1861-01A 10 0 5'UTR-5'UTR Intra-chr p25.2 TKL:RIPK p25.2 39464 ChimerSeq STARFusion TCGA_RNA-Seq FOXK2-PTPRN2 FOXK2 chr17 80478183 + PTPRN2 chr7 157691429 - Exonic hg19 OV TCGA-30-1861-01A 8 3 Out-of-frame Inter-chr q25.3 Transcription factor q36.3 Seq+ 39465 ChimerSeq STARFusion TCGA_RNA-Seq HGSNAT-VSTM2B HGSNAT chr8 43037403 + VSTM2B chr19 30054753 + Exonic hg19 OV TCGA-31-1950-01A 609 143 Out-of-frame Inter-chr p11.21 q12 Seq+ 39466 ChimerSeq STARFusion TCGA_RNA-Seq MTR-IGL@ MTR chr1 237057820 + IGL@ chr22 23264764 + Exonic hg19 OV TCGA-31-1950-01A 432 0 Out-of-frame Inter-chr q43 Oncogene q11.22 39467 ChimerSeq STARFusion TCGA_RNA-Seq MTR-IGLC7 MTR chr1 237057820 + IGLC7 chr22 23264764 + Exonic hg19 OV TCGA-31-1950-01A 432 0 Out-of-frame Inter-chr q43 Oncogene q11.22 39468 ChimerSeq STARFusion TCGA_RNA-Seq MTR-IGL@ MTR chr1 237057820 + IGL@ chr22 23243154 + Exonic hg19 OV TCGA-31-1950-01A 362 0 Out-of-frame Inter-chr q43 Oncogene q11.22 39469 ChimerSeq STARFusion TCGA_RNA-Seq MTR-IGL@ MTR chr1 237057820 + IGL@ chr22 23248510 + Exonic hg19 OV TCGA-31-1950-01A 359 0 Out-of-frame Inter-chr q43 Oncogene q11.22 39470 ChimerSeq STARFusion TCGA_RNA-Seq MTR-IGLC7 MTR chr1 237057820 + IGLC7 chr22 23243154 + Exonic hg19 OV TCGA-31-1950-01A 140 0 Out-of-frame Inter-chr q43 Oncogene q11.22 39471 ChimerSeq STARFusion TCGA_RNA-Seq MTR-IGL@ MTR chr1 237057820 + IGL@ chr22 23261705 + Exonic hg19 OV TCGA-31-1950-01A 138 0 Out-of-frame Inter-chr q43 Oncogene q11.22 39472 ChimerSeq STARFusion TCGA_RNA-Seq ZNF181-PEPD ZNF181 chr19 35225951 + PEPD chr19 33984243 - Exonic hg19 OV TCGA-31-1950-01A 59 13 In-Frame Intra-chr q13.11 Transcription factor q13.11 Seq+ 39473 ChimerSeq STARFusion TCGA_RNA-Seq ATP2B4-OPTC ATP2B4 chr1 203596347 + OPTC chr1 203466105 + Exonic hg19 OV TCGA-31-1950-01A 39 42 5'UTR-CDS Intra-chr q32.1 q32.1 Seq+ 39474 ChimerSeq STARFusion TCGA_RNA-Seq ATP2B4-OPTC ATP2B4 chr1 203596347 + OPTC chr1 203465093 + Exonic hg19 OV TCGA-31-1950-01A 38 42 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 39475 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-31-1950-01A 35 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39476 ChimerSeq STARFusion TCGA_RNA-Seq LGR6-RNF152 LGR6 chr1 202205121 + RNF152 chr18 59483831 - Exonic hg19 OV TCGA-31-1950-01A 31 5 CDS-5'UTR Inter-chr q32.1 q21.33 Seq+ 39477 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-25-1318-01A 30 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39478 ChimerSeq STARFusion TCGA_RNA-Seq ELOVL5-GLO1 ELOVL5 chr6 53213615 - GLO1 chr6 38654750 - Exonic hg19 OV TCGA-25-1318-01A 12 18 5'UTR-CDS Intra-chr p12.1 p21.2 Seq+ 39479 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-IGF2 FTH1 chr11 61732227 - IGF2 chr11 2152935 - Exonic hg19 OV TCGA-25-1318-01A 3 36 Out-of-frame Intra-chr q12.3 p15.5 Oncogene 39480 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-25-1318-01A 11 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 39481 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734942 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-25-1318-01A 11 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39482 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT5-SPATA2 B4GALT5 chr20 48257015 - SPATA2 chr20 48525129 - Exonic hg19 OV TCGA-25-1318-01A 6 4 CDS-5'UTR Intra-chr q13.13 q13.13 Seq+ 39483 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-IGF2 FTH1 chr11 61732227 - IGF2 chr11 2153051 - Exonic hg19 OV TCGA-25-1318-01A 3 13 Out-of-frame Intra-chr q12.3 p15.5 Oncogene 39484 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2-MNDA NOTCH2 chr1 120478095 - MNDA chr1 158815377 + Exonic hg19 OV TCGA-24-1474-01A 456 198 Out-of-frame Intra-chr p12 Oncogene Tumor suppressor gene q23.1 Seq+ 39485 ChimerSeq STARFusion TCGA_RNA-Seq ATP5I-WHSC1 ATP5I chr4 667701 - WHSC1 chr4 1936871 + Exonic hg19 OV TCGA-24-1474-01A 151 233 In-Frame Intra-chr p16.3 Oncogene Seq+ 39486 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP12-LINC00703 ARHGAP12 chr10 32115232 - LINC00703 chr10 4450647 + Exonic hg19 OV TCGA-24-1474-01A 151 86 Out-of-frame Intra-chr p11.22 p15.1 39487 ChimerSeq STARFusion TCGA_RNA-Seq ZNF93-CYP4F22 ZNF93 chr19 20011900 + CYP4F22 chr19 15634504 + Exonic hg19 OV TCGA-24-1474-01A 49 20 CDS-5'UTR Intra-chr p12 Transcription factor p13.12 Seq+ 39488 ChimerSeq STARFusion TCGA_RNA-Seq HCP5-LY6G6C HCP5 chr6 31368540 + LY6G6C chr6 31687087 - Exonic hg19 OV TCGA-24-1474-01A 51 3 5'UTR-CDS Intra-chr p21.33 Seq+ 39489 ChimerSeq STARFusion TCGA_RNA-Seq TP53-SLC6A4 TP53 chr17 7590695 - SLC6A4 chr17 28549933 - Exonic hg19 OV TCGA-24-1474-01A 29 80 5'UTR-3'UTR Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor q11.2 Seq+ 39490 ChimerSeq STARFusion TCGA_RNA-Seq TP53-SLC6A4 TP53 chr17 7590695 - SLC6A4 chr17 28549099 - Exonic hg19 OV TCGA-24-1474-01A 12 80 5'UTR-3'UTR Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor q11.2 Seq+ 39491 ChimerSeq STARFusion TCGA_RNA-Seq UBE4B-OR4G3P UBE4B chr1 10132272 + OR4G3P chr19 94892 + Exonic hg19 OV TCGA-24-1474-01A 28 7 Out-of-frame Inter-chr p36.22 Tumor suppressor gene p13.3 39492 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-MLLT10 FGFR3 chr4 1807631 + MLLT10 chr10 22028959 + Exonic hg19 OV TCGA-24-1474-01A 17 6 In-Frame Inter-chr p16.3 TK:FGFR Oncogene p12.31 Oncogene Seq+ 39493 ChimerSeq STARFusion TCGA_RNA-Seq ST3GAL1-GPR39 ST3GAL1 chr8 134583936 - GPR39 chr2 133402674 + Exonic hg19 OV TCGA-24-1474-01A 15 9 5'UTR-CDS Inter-chr q24.22 q21.2 Seq+ 39494 ChimerSeq STARFusion TCGA_RNA-Seq MARK3-KIF26A MARK3 chr14 103923549 + KIF26A chr14 104633196 + Exonic hg19 OV TCGA-24-1474-01A 15 8 Out-of-frame Intra-chr q32.32 CAMK:CAMKL q32.33 Seq+ 39495 ChimerSeq STARFusion TCGA_RNA-Seq C1orf21-PCAT1 C1orf21 chr1 184356502 + PCAT1 chr8 127889917 + Exonic hg19 OV TCGA-24-1474-01A 15 6 5'UTR-5'UTR Inter-chr q25.3 q24.21 Seq+ 39496 ChimerSeq STARFusion TCGA_RNA-Seq ZNF587B-LHFPL4 ZNF587B chr19 58350517 + LHFPL4 chr3 9547887 - Exonic hg19 OV TCGA-24-1474-01A 13 6 In-Frame Inter-chr q13.43 Transcription factor p25.3 Seq+ 39497 ChimerSeq STARFusion TCGA_RNA-Seq APBB2-ZFYVE28 APBB2 chr4 41216422 - ZFYVE28 chr4 2355800 - Exonic hg19 OV TCGA-24-1474-01A 9 9 5'UTR-5'UTR Intra-chr p13 p16.3 Seq+ 39498 ChimerSeq STARFusion TCGA_RNA-Seq APBB2-ZFYVE28 APBB2 chr4 41216422 - ZFYVE28 chr4 2343342 - Exonic hg19 OV TCGA-24-1474-01A 8 9 5'UTR-5'UTR Intra-chr p13 p16.3 Seq+ 39499 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A2-DHTKD1 SLC7A2 chr8 17359811 + DHTKD1 chr10 12154899 + Exonic hg19 OV TCGA-24-1474-01A 9 2 5'UTR-CDS Inter-chr p22 p14 Seq+ 39500 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB40-HOXD3 ZBTB40 chr1 22835726 + HOXD3 chr2 177001363 + Exonic hg19 OV TCGA-24-1474-01A 3 10 CDS-5'UTR Inter-chr p36.12 Transcription factor q31.1 Transcription factor 39501 ChimerSeq STARFusion TCGA_RNA-Seq LIMA1-RGL1 LIMA1 chr12 50677203 - RGL1 chr1 183849750 + Exonic hg19 OV TCGA-13-0888-01A 19 3 5'UTR-CDS Inter-chr q13.12 Tumor suppressor gene q25.3 Seq+ 39502 ChimerSeq STARFusion TCGA_RNA-Seq SEMA4B-ZNF710 SEMA4B chr15 90744967 + ZNF710 chr15 90616303 + Exonic hg19 OV TCGA-13-0888-01A 8 0 Out-of-frame Intra-chr q26.1 q26.1 Transcription factor Seq+ 39503 ChimerSeq STARFusion TCGA_RNA-Seq PPA1-LRRC20 PPA1 chr10 71973219 - LRRC20 chr10 72083786 - Exonic hg19 OV TCGA-13-0888-01A 5 2 In-Frame Intra-chr q22.1 q22.1 Seq+ 39504 ChimerSeq STARFusion TCGA_RNA-Seq UBE4B-RBP7 UBE4B chr1 10132272 + RBP7 chr1 10068231 + Exonic hg19 OV TCGA-13-0888-01A 4 3 Out-of-frame Intra-chr p36.22 Tumor suppressor gene p36.22 Seq+ 39505 ChimerSeq STARFusion TCGA_RNA-Seq ITGB4-SAP30BP ITGB4 chr17 73717692 + SAP30BP chr17 73695863 + Exonic hg19 OV TCGA-23-1029-01B 26 8 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 39506 ChimerSeq STARFusion TCGA_RNA-Seq ITGB4-SAP30BP ITGB4 chr17 73717643 + SAP30BP chr17 73695863 + Exonic hg19 OV TCGA-23-1029-01B 21 8 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 39507 ChimerSeq STARFusion TCGA_RNA-Seq KLHL22-UBE2L3 KLHL22 chr22 20843272 - UBE2L3 chr22 21947150 + Exonic hg19 OV TCGA-24-1845-01A 44 2 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 39508 ChimerSeq STARFusion TCGA_RNA-Seq CLASRP-TOMM40 CLASRP chr19 45571738 + TOMM40 chr19 45406287 + Exonic hg19 OV TCGA-24-1845-01A 40 0 In-Frame Intra-chr q13.32 q13.32 Seq+ 39509 ChimerSeq STARFusion TCGA_RNA-Seq MED1-CLPB MED1 chr17 37607291 - CLPB chr11 72040848 - Exonic hg19 OV TCGA-24-1845-01A 39 2 In-Frame Inter-chr q12 Tumor suppressor gene q13.4 Seq+ 39510 ChimerSeq STARFusion TCGA_RNA-Seq UCP2-AHNAK UCP2 chr11 73693766 - AHNAK chr11 62201363 - Exonic hg19 OV TCGA-24-2298-01A 142 4 5'UTR-CDS Intra-chr q13.4 q12.3 Tumor suppressor gene Seq+ 39511 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-BTBD1 HOMER2 chr15 83621283 - BTBD1 chr15 83686977 - Exonic hg19 OV TCGA-24-2298-01A 93 7 Out-of-frame Intra-chr q25.2 Tumor suppressor gene q25.2 Seq+ 39512 ChimerSeq STARFusion TCGA_RNA-Seq RBM47-APBB2 RBM47 chr4 40631413 - APBB2 chr4 40832594 - Exonic hg19 OV TCGA-24-2298-01A 71 23 5'UTR-5'UTR Intra-chr p14 p13 Seq+ 39513 ChimerSeq STARFusion TCGA_RNA-Seq MBOAT1-C1orf210 MBOAT1 chr6 20212367 - C1orf210 chr1 43749039 - Exonic hg19 OV TCGA-24-2298-01A 41 4 CDS-5'UTR Inter-chr p22.3 p34.2 Seq+ 39514 ChimerSeq STARFusion TCGA_RNA-Seq ACO2-ZC3H7B ACO2 chr22 41865186 + ZC3H7B chr22 41739419 + Exonic hg19 OV TCGA-24-2298-01A 40 0 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 39515 ChimerSeq STARFusion TCGA_RNA-Seq WASF4P-AHDC1 WASF4P chrX 47662824 + AHDC1 chr1 27885394 - Exonic hg19 OV TCGA-24-2298-01A 38 3 Out-of-frame Inter-chr p11.23 p35.3 Transcription factor 39516 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-SARM1 TAOK1 chr17 27718042 + SARM1 chr17 26722924 + Exonic hg19 OV TCGA-24-2298-01A 25 2 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 39517 ChimerSeq STARFusion TCGA_RNA-Seq AGAP1-IFIH1 AGAP1 chr2 236403493 + IFIH1 chr2 163167443 - Exonic hg19 OV TCGA-24-2298-01A 17 1 Out-of-frame Intra-chr q37.2 q24.2 Seq+ 39518 ChimerSeq STARFusion TCGA_RNA-Seq HSPA4-ERCC8 HSPA4 chr5 132432978 + ERCC8 chr5 60200700 - Exonic hg19 OV TCGA-24-2298-01A 15 0 In-Frame Intra-chr q31.1 q12.1 39519 ChimerSeq STARFusion TCGA_RNA-Seq RBM47-APBB2 RBM47 chr4 40632480 - APBB2 chr4 40832594 - Exonic hg19 OV TCGA-24-2298-01A 9 23 5'UTR-5'UTR Intra-chr p14 p13 Seq+ 39520 ChimerSeq STARFusion TCGA_RNA-Seq UBE3C-DNAJB6 UBE3C chr7 156976723 + DNAJB6 chr7 157151241 + Exonic hg19 OV TCGA-24-2298-01A 14 1 CDS-5'UTR Intra-chr q36.3 q36.3 Seq+ 39521 ChimerSeq STARFusion TCGA_RNA-Seq GRAMD4-RIBC2 GRAMD4 chr22 46973187 + RIBC2 chr22 45826780 + Exonic hg19 OV TCGA-24-2298-01A 14 0 5'UTR-CDS Intra-chr q13.31 q13.31 Seq+ 39522 ChimerSeq STARFusion TCGA_RNA-Seq EMG1-IL11 EMG1 chr12 7072511 + IL11 chr19 55880309 - Exonic hg19 OV TCGA-24-2298-01A 11 1 5'UTR-CDS Inter-chr p13.31 q13.42 39523 ChimerSeq STARFusion TCGA_RNA-Seq EPN1-CCDC106 EPN1 chr19 56190221 + CCDC106 chr19 56160368 + Exonic hg19 OV TCGA-24-2298-01A 10 2 CDS-5'UTR Intra-chr q13.42 q13.42 Seq+ 39524 ChimerSeq STARFusion TCGA_RNA-Seq TMC6-TK1 TMC6 chr17 76124693 - TK1 chr17 76171699 - Exonic hg19 OV TCGA-61-1917-01A 111 12 5'UTR-CDS Intra-chr q25.3 q25.3 Seq+ 39525 ChimerSeq STARFusion TCGA_RNA-Seq SF1-C11orf85 SF1 chr11 64540902 - C11orf85 chr11 64706045 - Exonic hg19 OV TCGA-61-1917-01A 107 9 CDS-3'UTR Intra-chr q13.1 Seq+ 39526 ChimerSeq STARFusion TCGA_RNA-Seq ITGB4-MYO15B ITGB4 chr17 73717692 + MYO15B chr17 73620450 + Exonic hg19 OV TCGA-61-1917-01A 89 31 5'UTR-5'UTR Intra-chr q25.1 q25.1 Seq+ 39527 ChimerSeq STARFusion TCGA_RNA-Seq ITGB4-MYO15B ITGB4 chr17 73717643 + MYO15B chr17 73620450 + Exonic hg19 OV TCGA-61-1917-01A 62 31 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 39528 ChimerSeq STARFusion TCGA_RNA-Seq ITGB4-MYO15B ITGB4 chr17 73717692 + MYO15B chr17 73620623 + Exonic hg19 OV TCGA-61-1917-01A 56 31 5'UTR-5'UTR Intra-chr q25.1 q25.1 Seq+ 39529 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT3-SOAT2 AGPAT3 chr21 45323900 + SOAT2 chr12 53509881 + Exonic hg19 OV TCGA-61-1917-01A 59 3 5'UTR-CDS Inter-chr q22.3 q13.13 Seq+ 39530 ChimerSeq STARFusion TCGA_RNA-Seq GRB10-CSTF3 GRB10 chr7 50771518 - CSTF3 chr11 33108687 - Exonic hg19 OV TCGA-61-1917-01A 55 5 Out-of-frame Inter-chr p12.1 p13 Seq+ 39531 ChimerSeq STARFusion TCGA_RNA-Seq TET3-ACTG2 TET3 chr2 74230293 + ACTG2 chr2 74128403 + Exonic hg19 OV TCGA-61-1917-01A 55 2 5'UTR-5'UTR Intra-chr p13.1 Transcription factor p13.1 Seq+ 39532 ChimerSeq STARFusion TCGA_RNA-Seq RNF185-INPP5J RNF185 chr22 31556289 + INPP5J chr22 31529084 + Exonic hg19 OV TCGA-61-1917-01A 47 14 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 39533 ChimerSeq STARFusion TCGA_RNA-Seq ITGB4-MYO15B ITGB4 chr17 73717643 + MYO15B chr17 73620255 + Exonic hg19 OV TCGA-61-1917-01A 36 31 5'UTR-5'UTR Intra-chr q25.1 q25.1 Seq+ 39534 ChimerSeq STARFusion TCGA_RNA-Seq ITGB4-MYO15B ITGB4 chr17 73717647 + MYO15B chr17 73620627 + Exonic hg19 OV TCGA-61-1917-01A 31 31 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 39535 ChimerSeq STARFusion TCGA_RNA-Seq ITGB4-MYO15B ITGB4 chr17 73717692 + MYO15B chr17 73620255 + Exonic hg19 OV TCGA-61-1917-01A 27 31 5'UTR-5'UTR Intra-chr q25.1 q25.1 Seq+ 39536 ChimerSeq STARFusion TCGA_RNA-Seq ITGB4-MYO15B ITGB4 chr17 73717643 + MYO15B chr17 73620623 + Exonic hg19 OV TCGA-61-1917-01A 23 31 5'UTR-5'UTR Intra-chr q25.1 q25.1 Seq+ 39537 ChimerSeq STARFusion TCGA_RNA-Seq AKAP13-VWA9 AKAP13 chr15 85924029 + VWA9 chr15 65877226 - Exonic hg19 OV TCGA-61-1917-01A 25 2 Out-of-frame Intra-chr q25.3 39538 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1199-LRRC49 KIAA1199 chr15 81224380 + LRRC49 chr15 71229100 + Exonic hg19 OV TCGA-61-1917-01A 25 1 In-Frame Intra-chr q23 Seq+ 39539 ChimerSeq STARFusion TCGA_RNA-Seq CAPNS1-TBCB CAPNS1 chr19 36631484 + TBCB chr19 36605954 + Exonic hg19 OV TCGA-61-1917-01A 23 2 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 39540 ChimerSeq STARFusion TCGA_RNA-Seq UBE2Q2-ABHD17C UBE2Q2 chr15 76136187 + ABHD17C chr15 81041854 + Exonic hg19 OV TCGA-61-1917-01A 22 1 Out-of-frame Intra-chr q24.2 q25.1 Seq+ 39541 ChimerSeq STARFusion TCGA_RNA-Seq CAPNS1-TBCB CAPNS1 chr19 36631059 + TBCB chr19 36605992 + Exonic hg19 OV TCGA-61-1917-01A 21 2 5'UTR-5'UTR Intra-chr q13.12 q13.12 Seq+ 39542 ChimerSeq STARFusion TCGA_RNA-Seq TMC6-TK1 TMC6 chr17 76124740 - TK1 chr17 76171699 - Exonic hg19 OV TCGA-61-1917-01A 17 12 5'UTR-CDS Intra-chr q25.3 q25.3 Seq+ 39543 ChimerSeq STARFusion TCGA_RNA-Seq CDK13-C7orf10 CDK13 chr7 40041630 + C7orf10 chr7 40277234 + Exonic hg19 OV TCGA-61-1917-01A 16 0 In-Frame Intra-chr p14.1 Seq+ 39544 ChimerSeq STARFusion TCGA_RNA-Seq KMT2C-GALNTL5 KMT2C chr7 152132711 - GALNTL5 chr7 151699799 + Exonic hg19 OV TCGA-61-1917-01A 14 5 Out-of-frame Intra-chr q36.1 Oncogene Tumor suppressor gene q36.1 Seq+ 39545 ChimerSeq STARFusion TCGA_RNA-Seq MECOM-SLC7A14 MECOM chr3 169381124 - SLC7A14 chr3 170219134 - Exonic hg19 OV TCGA-61-1917-01A 15 0 In-Frame Intra-chr q26.2 Transcription factor q26.2 Seq+ 39546 ChimerSeq STARFusion TCGA_RNA-Seq RNF4-FAM193A RNF4 chr4 2498848 + FAM193A chr4 2664565 + Exonic hg19 OV TCGA-61-1917-01A 12 1 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 39547 ChimerSeq STARFusion TCGA_RNA-Seq LSM4-LRRC25 LSM4 chr19 18420488 - LRRC25 chr19 18508453 - Exonic hg19 OV TCGA-61-1917-01A 11 3 CDS-5'UTR Intra-chr p13.11 p13.11 39548 ChimerSeq STARFusion TCGA_RNA-Seq RNF185-INPP5J RNF185 chr22 31556289 + INPP5J chr22 31529392 + Exonic hg19 OV TCGA-61-1917-01A 7 14 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 39549 ChimerSeq STARFusion TCGA_RNA-Seq MARK2-C11orf84 MARK2 chr11 63607032 + C11orf84 chr11 63594400 + Exonic hg19 OV TCGA-61-1917-01A 10 1 Out-of-frame Intra-chr q13.1 CAMK:CAMKL q13.1 Seq+ 39550 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT3-SOAT2 AGPAT3 chr21 45323900 + SOAT2 chr12 53509174 + Exonic hg19 OV TCGA-61-1917-01A 8 3 5'UTR-CDS Inter-chr q22.3 q13.13 Seq+ 39551 ChimerSeq STARFusion TCGA_RNA-Seq H3F3A-DNAH14 H3F3A chr1 226253510 + DNAH14 chr1 225418775 + Exonic hg19 OV TCGA-61-1917-01A 8 3 Out-of-frame Intra-chr q42.12 Oncogene q42.12 39552 ChimerSeq STARFusion TCGA_RNA-Seq KMT2C-GALNTL5 KMT2C chr7 152132711 - GALNTL5 chr7 151668030 + Exonic hg19 OV TCGA-61-1917-01A 7 5 Out-of-frame Intra-chr q36.1 Oncogene Tumor suppressor gene q36.1 Seq+ 39553 ChimerSeq STARFusion TCGA_RNA-Seq THRAP3-LRRC59 THRAP3 chr1 36690106 + LRRC59 chr17 48465493 - Exonic hg19 OV TCGA-61-1917-01A 8 1 5'UTR-CDS Inter-chr p34.3 q21.33 39554 ChimerSeq STARFusion TCGA_RNA-Seq AKAP13-VWA9 AKAP13 chr15 85924029 + VWA9 chr15 65884069 - Exonic hg19 OV TCGA-61-1917-01A 7 2 Out-of-frame Intra-chr q25.3 39555 ChimerSeq STARFusion TCGA_RNA-Seq SULF1-RPS29 SULF1 chr8 70512988 + RPS29 chr14 50052767 - Exonic hg19 OV TCGA-09-1667-01C 114 83 Out-of-frame Inter-chr q13.2 q21.3 Seq+ 39556 ChimerSeq STARFusion TCGA_RNA-Seq SULF1-RPS29 SULF1 chr8 70501376 + RPS29 chr14 50052767 - Exonic hg19 OV TCGA-09-1667-01C 18 71 In-Frame Inter-chr q13.2 q21.3 Seq+ 39557 ChimerSeq STARFusion TCGA_RNA-Seq CERS2-GOLPH3L CERS2 chr1 150941394 - GOLPH3L chr1 150621224 - Exonic hg19 OV TCGA-09-1667-01C 22 12 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 39558 ChimerSeq STARFusion TCGA_RNA-Seq ADAM9-CRB1 ADAM9 chr8 38854679 + CRB1 chr1 197297552 + Exonic hg19 OV TCGA-09-1667-01C 14 12 In-Frame Inter-chr q31.3 Seq+ 39559 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-UBE2D2 SNHG3 chr1 28834672 + UBE2D2 chr5 138979957 + Exonic hg19 OV TCGA-09-1667-01C 15 1 5'UTR-5'UTR Inter-chr p35.3 q31.2 39560 ChimerSeq STARFusion TCGA_RNA-Seq WWP1-C8orf34 WWP1 chr8 87442980 + C8orf34 chr8 69688634 + Exonic hg19 OV TCGA-09-1667-01C 12 8 Out-of-frame Intra-chr q21.3 q13.2 Seq+ 39561 ChimerSeq STARFusion TCGA_RNA-Seq INADL-NFIA INADL chr1 62241006 + NFIA chr1 61920975 + Exonic hg19 OV TCGA-09-1667-01C 12 5 In-Frame Intra-chr p31.3 Transcription factor Seq+ 39562 ChimerSeq STARFusion TCGA_RNA-Seq JAK1-HSD11B1 JAK1 chr1 65432016 - HSD11B1 chr1 209878262 + Exonic hg19 OV TCGA-09-1667-01C 10 4 5'UTR-5'UTR Intra-chr p31.3 TK:JakA Oncogene q32.2 Seq+ 39563 ChimerSeq STARFusion TCGA_RNA-Seq NUDCD1-OR10J1 NUDCD1 chr8 110283234 - OR10J1 chr1 159409566 + Exonic hg19 OV TCGA-09-1667-01C 10 4 Out-of-frame Inter-chr q23.1 q23.2 Seq+ 39564 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-09-1667-01C 10 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39565 ChimerSeq STARFusion TCGA_RNA-Seq DHPS-CACNA1A DHPS chr19 12792374 - CACNA1A chr19 13325422 - Exonic hg19 OV TCGA-09-1667-01C 7 1 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 39566 ChimerSeq STARFusion TCGA_RNA-Seq RIMS4-AKAP10 RIMS4 chr20 43438816 - AKAP10 chr17 19871774 - Exonic hg19 OV TCGA-09-1667-01C 6 5 In-Frame Inter-chr q13.12 p11.2 Seq+ 39567 ChimerSeq STARFusion TCGA_RNA-Seq CERS2-GOLPH3L CERS2 chr1 150947095 - GOLPH3L chr1 150621224 - Exonic hg19 OV TCGA-09-1667-01C 3 12 5'UTR-CDS Intra-chr q21.3 q21.3 Seq+ 39568 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2A-ZNF93 GATAD2A chr19 19516828 + ZNF93 chr19 20043991 + Exonic hg19 OV TCGA-09-1667-01C 4 6 5'UTR-CDS Intra-chr p13.11 Transcription factor p12 Transcription factor Seq+ 39569 ChimerSeq STARFusion TCGA_RNA-Seq WWP1-C8orf34 WWP1 chr8 87442980 + C8orf34 chr8 69699678 + Exonic hg19 OV TCGA-09-1667-01C 2 8 Out-of-frame Intra-chr q21.3 q13.2 Seq+ 39570 ChimerSeq STARFusion TCGA_RNA-Seq ZNF83-TARM1 ZNF83 chr19 53158814 - TARM1 chr19 54573414 - Exonic hg19 OV TCGA-59-2348-01A 428 64 5'UTR-CDS Intra-chr q13.41 Transcription factor Seq+ 39571 ChimerSeq STARFusion TCGA_RNA-Seq SLC48A1-HECA SLC48A1 chr12 48167223 + HECA chr6 139487421 + Exonic hg19 OV TCGA-59-2348-01A 30 4 In-Frame Inter-chr q13.11 q24.1 Tumor suppressor gene Seq+ 39572 ChimerSeq STARFusion TCGA_RNA-Seq PARD3-CUL2 PARD3 chr10 35103804 - CUL2 chr10 35305322 - Exonic hg19 OV TCGA-59-2348-01A 25 4 Out-of-frame Intra-chr p11.21 p11.21 Tumor suppressor gene Seq+ 39573 ChimerSeq STARFusion TCGA_RNA-Seq FAM118A-NUP50 FAM118A chr22 45706064 + NUP50 chr22 45577167 + Exonic hg19 OV TCGA-59-2348-01A 22 2 5'UTR-CDS Intra-chr q13.31 q13.31 Seq+ 39574 ChimerSeq STARFusion TCGA_RNA-Seq PTPN2-FOXA1 PTPN2 chr18 12884072 - FOXA1 chr14 38061916 - Exonic hg19 OV TCGA-59-2348-01A 19 3 In-Frame Inter-chr p11.21 Tumor suppressor gene q21.1 Tumor suppressor gene Transcription factor Seq+ 39575 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD28-TBC1D5 ANKRD28 chr3 15719024 - TBC1D5 chr3 17201978 - Exonic hg19 OV TCGA-59-2348-01A 15 3 Out-of-frame Intra-chr p25.1 p24.3 Seq+ 39576 ChimerSeq STARFusion TCGA_RNA-Seq PFKFB2-GDAP1L1 PFKFB2 chr1 207238505 + GDAP1L1 chr20 42891870 + Exonic hg19 OV TCGA-59-2348-01A 13 0 Out-of-frame Inter-chr q32.1 q13.12 Seq+ 39577 ChimerSeq STARFusion TCGA_RNA-Seq SLC38A2-C12orf4 SLC38A2 chr12 46758172 - C12orf4 chr12 4634749 - Exonic hg19 OV TCGA-59-2348-01A 12 4 Out-of-frame Intra-chr q13.11 p13.32 Seq+ 39578 ChimerSeq STARFusion TCGA_RNA-Seq RRP36-PPP2R5D RRP36 chr6 42989522 + PPP2R5D chr6 42974201 + Exonic hg19 OV TCGA-59-2348-01A 12 1 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 39579 ChimerSeq STARFusion TCGA_RNA-Seq POR-MDH2 POR chr7 75544497 + MDH2 chr7 75684148 + Exonic hg19 OV TCGA-59-2348-01A 11 0 5'UTR-CDS Intra-chr q11.23 q11.23 Seq+ 39580 ChimerSeq STARFusion TCGA_RNA-Seq TMEM135-MIPEP TMEM135 chr11 86749228 + MIPEP chr13 24304584 - Exonic hg19 OV TCGA-24-1556-01A 111 12 Out-of-frame Inter-chr q14.2 q12.12 Seq+ 39581 ChimerSeq STARFusion TCGA_RNA-Seq PRC1-VPS33B PRC1 chr15 91523472 - VPS33B chr15 91542284 - Exonic hg19 OV TCGA-24-1556-01A 55 1 In-Frame Intra-chr q26.1 q26.1 Seq+ 39582 ChimerSeq STARFusion TCGA_RNA-Seq ANKAR-ASNSD1 ANKAR chr2 190539556 + ASNSD1 chr2 190535167 + Exonic hg19 OV TCGA-24-1556-01A 38 5 5'UTR-CDS Intra-chr q32.2 q32.2 Seq+ 39583 ChimerSeq STARFusion TCGA_RNA-Seq MACF1-CMTM4 MACF1 chr1 39854330 + CMTM4 chr16 66670484 - Exonic hg19 OV TCGA-24-1556-01A 32 2 In-Frame Inter-chr p34.3 q22.1 Seq+ 39584 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V1H-FAM150A ATP6V1H chr8 54656137 - FAM150A chr8 53447160 - Exonic hg19 OV TCGA-24-1556-01A 15 3 CDS-3'UTR Intra-chr q11.23 Seq+ 39585 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1598-YTHDF1 KIAA1598 chr10 118764533 - YTHDF1 chr20 61828086 - Exonic hg19 OV TCGA-24-1556-01A 15 1 Out-of-frame Inter-chr q13.33 Seq+ 39586 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010681 - TTC18 chr10 75016173 - Exonic hg19 OV TCGA-04-1331-01A 81 50 Out-of-frame Intra-chr q22.2 39587 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010573 - TTC18 chr10 75016174 - Exonic hg19 OV TCGA-04-1331-01A 66 49 3'UTR-CDS Intra-chr q22.2 39588 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010596 - TTC18 chr10 75016174 - Exonic hg19 OV TCGA-04-1331-01A 43 49 3'UTR-CDS Intra-chr q22.2 39589 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75011521 - TTC18 chr10 75016174 - Exonic hg19 OV TCGA-04-1331-01A 16 49 Out-of-frame Intra-chr q22.2 39590 ChimerSeq STARFusion TCGA_RNA-Seq NOSIP-TSKS NOSIP chr19 50083772 - TSKS chr19 50265489 - Exonic hg19 OV TCGA-04-1331-01A 16 0 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 39591 ChimerSeq STARFusion TCGA_RNA-Seq TESK2-CHD2 TESK2 chr1 45956524 - CHD2 chr15 93428745 + Exonic hg19 OV TCGA-04-1331-01A 11 2 5'UTR-5'UTR Inter-chr p34.1 TKL:LISK q26.1 39592 ChimerSeq STARFusion TCGA_RNA-Seq RPL13-MTATP8P1 RPL13 chr16 89629370 + MTATP8P1 chr1 568945 + Exonic hg19 OV TCGA-24-1413-01A 6 3 Out-of-frame Inter-chr q24.3 p36.33 39593 ChimerSeq STARFusion TCGA_RNA-Seq RBM47-EXOC1 RBM47 chr4 40546439 - EXOC1 chr4 56744083 + Exonic hg19 OV TCGA-36-1571-01A 98 38 5'UTR-CDS Intra-chr p14 q12 Seq+ 39594 ChimerSeq STARFusion TCGA_RNA-Seq DOK5-CLEC17A DOK5 chr20 53260117 + CLEC17A chr19 14717805 + Exonic hg19 OV TCGA-36-1571-01A 6 6 Out-of-frame Inter-chr q13.2 p13.12 Seq+ 39595 ChimerSeq STARFusion TCGA_RNA-Seq EXOC1-XKR3 EXOC1 chr4 56737399 + XKR3 chr22 17288973 - Exonic hg19 OV TCGA-36-1571-01A 6 6 CDS-5'UTR Inter-chr q12 q11.1 Seq+ 39596 ChimerSeq STARFusion TCGA_RNA-Seq ETNK1-ITPR2 ETNK1 chr12 22778520 + ITPR2 chr12 26493261 - Exonic hg19 OV TCGA-25-1329-01A 114 27 In-Frame Intra-chr p12.1 p11.23 Seq+ 39597 ChimerSeq STARFusion TCGA_RNA-Seq MCM5-LYN MCM5 chr22 35799535 + LYN chr8 56910905 + Exonic hg19 OV TCGA-25-1329-01A 75 18 In-Frame Inter-chr q12.3 q12.1 TK:Src Seq+ 39598 ChimerSeq STARFusion TCGA_RNA-Seq SPTLC3-PPAP2A SPTLC3 chr20 13090864 + PPAP2A chr5 54737736 - Exonic hg19 OV TCGA-25-1329-01A 44 13 In-Frame Inter-chr p12.1 Seq+ 39599 ChimerSeq STARFusion TCGA_RNA-Seq ITPR2-MRPS35 ITPR2 chr12 26774056 - MRPS35 chr12 27888380 + Exonic hg19 OV TCGA-25-1329-01A 37 8 In-Frame Intra-chr p11.23 p11.22 Seq+ 39600 ChimerSeq STARFusion TCGA_RNA-Seq ARRDC2-KCNN1 ARRDC2 chr19 18112382 + KCNN1 chr19 18084617 + Exonic hg19 OV TCGA-25-1329-01A 27 5 CDS-5'UTR Intra-chr p13.11 p13.11 Seq+ 39601 ChimerSeq STARFusion TCGA_RNA-Seq ENPP3-IGKC ENPP3 chr6 131949724 + IGKC chr2 89157199 - Exonic hg19 OV TCGA-25-1329-01A 25 0 Out-of-frame Inter-chr q23.2 p11.2 39602 ChimerSeq STARFusion TCGA_RNA-Seq CBX5-GTSF1 CBX5 chr12 54645825 - GTSF1 chr12 54857081 - Exonic hg19 OV TCGA-25-1329-01A 13 17 In-Frame Intra-chr q13.13 Tumor suppressor gene q13.13 Seq+ 39603 ChimerSeq STARFusion TCGA_RNA-Seq H19-IGF2 H19 chr11 2017951 - IGF2 chr11 2152011 - Exonic hg19 OV TCGA-25-1329-01A 3 56 Out-of-frame Intra-chr p15.5 Tumor suppressor gene p15.5 Oncogene 39604 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-25-1329-01A 16 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39605 ChimerSeq STARFusion TCGA_RNA-Seq CBX5-GTSF1 CBX5 chr12 54645825 - GTSF1 chr12 54865061 - Exonic hg19 OV TCGA-25-1329-01A 11 17 CDS-5'UTR Intra-chr q13.13 Tumor suppressor gene q13.13 Seq+ 39606 ChimerSeq STARFusion TCGA_RNA-Seq KCNN1-SLC27A1 KCNN1 chr19 18100627 + SLC27A1 chr19 17597372 + Exonic hg19 OV TCGA-25-1329-01A 9 8 In-Frame Intra-chr p13.11 p13.11 Seq+ 39607 ChimerSeq STARFusion TCGA_RNA-Seq KCNN1-SLC27A1 KCNN1 chr19 18100627 + SLC27A1 chr19 17594691 + Exonic hg19 OV TCGA-25-1329-01A 8 8 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 39608 ChimerSeq STARFusion TCGA_RNA-Seq BCAT1-H19 BCAT1 chr12 24966000 - H19 chr11 2019041 - Exonic hg19 OV TCGA-25-1329-01A 4 9 Out-of-frame Inter-chr p12.1 p15.5 Tumor suppressor gene 39609 ChimerSeq STARFusion TCGA_RNA-Seq CBX5-GTSF1 CBX5 chr12 54645825 - GTSF1 chr12 54858951 - Exonic hg19 OV TCGA-25-1329-01A 2 17 Out-of-frame Intra-chr q13.13 Tumor suppressor gene q13.13 Seq+ 39610 ChimerSeq STARFusion TCGA_RNA-Seq ITM2B-RB1 ITM2B chr13 48807613 + RB1 chr13 48916735 + Exonic hg19 OV TCGA-61-2109-01A 91 12 In-Frame Intra-chr q14.2 q14.2 Oncogene Tumor suppressor gene Seq+ 39611 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-PTK2 AGO2 chr8 141645584 - PTK2 chr8 141712806 - Exonic hg19 OV TCGA-61-2109-01A 30 9 Out-of-frame Intra-chr q24.3 q24.3 39612 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-61-2109-01A 24 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39613 ChimerSeq STARFusion TCGA_RNA-Seq UBAP2-C15orf41 UBAP2 chr9 33923184 - C15orf41 chr15 37100525 + Exonic hg19 OV TCGA-61-2109-01A 20 8 Out-of-frame Inter-chr p13.3 q14 Seq+ 39614 ChimerSeq STARFusion TCGA_RNA-Seq TOP3B-MAPK1 TOP3B chr22 22328729 - MAPK1 chr22 22162135 - Exonic hg19 OV TCGA-61-2109-01A 13 3 Out-of-frame Intra-chr q11.22 q11.22 Oncogene Seq+ 39615 ChimerSeq STARFusion TCGA_RNA-Seq AXIN1-BBX AXIN1 chr16 396148 - BBX chr3 107466812 + Exonic hg19 OV TCGA-61-2109-01A 11 6 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene q13.12 Transcription factor Seq+ 39616 ChimerSeq STARFusion TCGA_RNA-Seq MAPK9-GOLGA6A MAPK9 chr5 179688684 - GOLGA6A chr15 74369643 - Exonic hg19 OV TCGA-61-2109-01A 12 2 In-Frame Inter-chr q35.3 Tumor suppressor gene q24.1 39617 ChimerSeq STARFusion TCGA_RNA-Seq VPS13C-ENKD1 VPS13C chr15 62221700 - ENKD1 chr16 67697459 - Exonic hg19 OV TCGA-61-2109-01A 6 5 Out-of-frame Inter-chr q22.2 q22.1 Seq+ 39618 ChimerSeq STARFusion TCGA_RNA-Seq VPS13C-ENKD1 VPS13C chr15 62221700 - ENKD1 chr16 67697965 - Exonic hg19 OV TCGA-61-2109-01A 6 5 Out-of-frame Inter-chr q22.2 q22.1 Seq+ 39619 ChimerSeq STARFusion TCGA_RNA-Seq RPS17-SPP1 RPS17 chr15 82823336 - SPP1 chr4 88896865 + Exonic hg19 OV TCGA-61-2109-01A 5 5 Out-of-frame Inter-chr q25.2 q22.1 39620 ChimerSeq STARFusion TCGA_RNA-Seq VPS13C-ENKD1 VPS13C chr15 62221700 - ENKD1 chr16 67697723 - Exonic hg19 OV TCGA-61-2109-01A 5 5 Out-of-frame Inter-chr q22.2 q22.1 Seq+ 39621 ChimerSeq STARFusion TCGA_RNA-Seq AXIN1-BBX AXIN1 chr16 402369 - BBX chr3 107466812 + Exonic hg19 OV TCGA-61-2109-01A 3 6 5'UTR-CDS Inter-chr p13.3 Oncogene Tumor suppressor gene q13.12 Transcription factor Seq+ 39622 ChimerSeq STARFusion TCGA_RNA-Seq VPS13C-ENKD1 VPS13C chr15 62221839 - ENKD1 chr16 67697965 - Exonic hg19 OV TCGA-61-2109-01A 3 5 Out-of-frame Inter-chr q22.2 q22.1 Seq+ 39623 ChimerSeq STARFusion TCGA_RNA-Seq SP3-GPR155 SP3 chr2 174819601 - GPR155 chr2 175318569 - Exonic hg19 OV TCGA-09-1662-01A 60 17 In-Frame Intra-chr q31.1 Transcription factor q31.1 Seq+ 39624 ChimerSeq STARFusion TCGA_RNA-Seq HK2-ONECUT3 HK2 chr2 75101576 + ONECUT3 chr19 1775152 + Exonic hg19 OV TCGA-09-1662-01A 31 14 Out-of-frame Inter-chr p12 p13.3 Transcription factor Seq+ 39625 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-09-1662-01A 33 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39626 ChimerSeq STARFusion TCGA_RNA-Seq KMT2D-RHEBL1 KMT2D chr12 49439703 - RHEBL1 chr12 49460818 - Exonic hg19 OV TCGA-09-1662-01A 27 22 Out-of-frame Intra-chr q13.12 Oncogene q13.12 Seq+ 39627 ChimerSeq STARFusion TCGA_RNA-Seq KMT2D-RHEBL1 KMT2D chr12 49439848 - RHEBL1 chr12 49460818 - Exonic hg19 OV TCGA-09-1662-01A 22 22 Out-of-frame Intra-chr q13.12 Oncogene q13.12 Seq+ 39628 ChimerSeq STARFusion TCGA_RNA-Seq STYX-C14orf166 STYX chr14 53197249 + C14orf166 chr14 52458035 + Exonic hg19 OV TCGA-09-1662-01A 17 8 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 39629 ChimerSeq STARFusion TCGA_RNA-Seq LPP-MBNL1 LPP chr3 188059507 + MBNL1 chr3 152132730 + Exonic hg19 OV TCGA-09-1662-01A 12 2 5'UTR-CDS Intra-chr q27.3 Oncogene q25.1 Seq+ 39630 ChimerSeq STARFusion TCGA_RNA-Seq SP3-GPR155 SP3 chr2 174819601 - GPR155 chr2 175311475 - Exonic hg19 OV TCGA-09-1662-01A 6 17 In-Frame Intra-chr q31.1 Transcription factor q31.1 Seq+ 39631 ChimerSeq STARFusion TCGA_RNA-Seq AFAP1-KCNIP4 AFAP1 chr4 7787921 - KCNIP4 chr4 20731752 - Exonic hg19 OV TCGA-24-1562-01A 60 17 In-Frame Intra-chr p16.1 p15.2 Seq+ 39632 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-SRL CREBBP chr16 3794895 - SRL chr16 4254635 - Exonic hg19 OV TCGA-24-1562-01A 34 1 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 39633 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-1562-01A 28 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39634 ChimerSeq STARFusion TCGA_RNA-Seq AFAP1-KCNIP4 AFAP1 chr4 7783103 - KCNIP4 chr4 20731752 - Exonic hg19 OV TCGA-24-1562-01A 7 17 In-Frame Intra-chr p16.1 p15.2 Seq+ 39635 ChimerSeq STARFusion TCGA_RNA-Seq SYT7-AHNAK SYT7 chr11 61348262 - AHNAK chr11 62259303 - Exonic hg19 OV TCGA-24-0970-01B 245 64 Out-of-frame Intra-chr q12.2 q12.3 Tumor suppressor gene Seq+ 39636 ChimerSeq STARFusion TCGA_RNA-Seq KMT2E-LHFPL3 KMT2E chr7 104654982 + LHFPL3 chr7 104546634 + Exonic hg19 OV TCGA-24-0970-01B 92 37 Out-of-frame Intra-chr q22.3 q22.2 39637 ChimerSeq STARFusion TCGA_RNA-Seq SYMPK-IGFL4 SYMPK chr19 46366316 - IGFL4 chr19 46563551 - Exonic hg19 OV TCGA-24-0970-01B 47 31 5'UTR-5'UTR Intra-chr q13.32 q13.32 39638 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-MAST3 TBL1XR1 chr3 176914909 - MAST3 chr19 18245389 + Exonic hg19 OV TCGA-24-0970-01B 46 30 5'UTR-CDS Inter-chr q26.32 p13.11 AGC:MAST Seq+ 39639 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-24-0970-01B 48 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39640 ChimerSeq STARFusion TCGA_RNA-Seq C19orf25-TCF3 C19orf25 chr19 1478773 - TCF3 chr19 1632404 - Exonic hg19 OV TCGA-24-0970-01B 30 8 In-Frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Transcription factor 39641 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-FAM168A UVRAG chr11 75572825 + FAM168A chr11 73179537 - Exonic hg19 OV TCGA-24-0970-01B 21 14 CDS-5'UTR Intra-chr q13.5 Tumor suppressor gene q13.4 Seq+ 39642 ChimerSeq STARFusion TCGA_RNA-Seq UBE2Z-NPEPPS UBE2Z chr17 46993549 + NPEPPS chr17 45673719 + Exonic hg19 OV TCGA-24-0970-01B 19 9 Out-of-frame Intra-chr q21.32 q21.32 Seq+ 39643 ChimerSeq STARFusion TCGA_RNA-Seq TOLLIP-AP2A2 TOLLIP chr11 1330696 - AP2A2 chr11 972062 + Exonic hg19 OV TCGA-24-0970-01B 19 7 In-Frame Intra-chr p15.5 p15.5 Seq+ 39644 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734942 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-24-0970-01B 20 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39645 ChimerSeq STARFusion TCGA_RNA-Seq ACADS-PRKAB1 ACADS chr12 121164992 + PRKAB1 chr12 120111769 + Exonic hg19 OV TCGA-24-0970-01B 17 10 Out-of-frame Intra-chr q24.31 q24.23 Seq+ 39646 ChimerSeq STARFusion TCGA_RNA-Seq WNK1-IQSEC3 WNK1 chr12 863490 + IQSEC3 chr12 247433 + Exonic hg19 OV TCGA-24-0970-01B 17 7 In-Frame Intra-chr p13.33 Seq+ 39647 ChimerSeq STARFusion TCGA_RNA-Seq LLGL2-TMEM104 LLGL2 chr17 73568145 + TMEM104 chr17 72832066 + Exonic hg19 OV TCGA-24-0970-01B 13 5 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 39648 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-24-0970-01B 14 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 39649 ChimerSeq STARFusion TCGA_RNA-Seq CALML4-ITGA11 CALML4 chr15 68489778 - ITGA11 chr15 68613841 - Exonic hg19 OV TCGA-24-0970-01B 12 5 Out-of-frame Intra-chr q23 q23 Seq+ 39650 ChimerSeq STARFusion TCGA_RNA-Seq TOLLIP-AP2A2 TOLLIP chr11 1330696 - AP2A2 chr11 970169 + Exonic hg19 OV TCGA-24-0970-01B 10 7 Out-of-frame Intra-chr p15.5 p15.5 Seq+ 39651 ChimerSeq STARFusion TCGA_RNA-Seq LLGL2-TMEM104 LLGL2 chr17 73567181 + TMEM104 chr17 72832066 + Exonic hg19 OV TCGA-24-0970-01B 10 5 In-Frame Intra-chr q25.1 q25.1 Seq+ 39652 ChimerSeq STARFusion TCGA_RNA-Seq PVRL2-BCAM PVRL2 chr19 45368917 + BCAM chr19 45321779 + Exonic hg19 OV TCGA-24-0970-01B 10 4 In-Frame Intra-chr q13.32 39653 ChimerSeq STARFusion TCGA_RNA-Seq YPEL1-PPIL2 YPEL1 chr22 22089904 - PPIL2 chr22 22048105 + Exonic hg19 OV TCGA-24-0970-01B 10 4 5'UTR-CDS Intra-chr q11.22 q11.21 39654 ChimerSeq STARFusion TCGA_RNA-Seq RBM6-TRAIP RBM6 chr3 50012825 + TRAIP chr3 49882013 - Exonic hg19 OV TCGA-24-0970-01B 9 3 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 39655 ChimerSeq STARFusion TCGA_RNA-Seq STK4-PKIG STK4 chr20 43629994 + PKIG chr20 43243175 + Exonic hg19 OV TCGA-24-0970-01B 8 6 CDS-5'UTR Intra-chr q13.12 q13.12 Seq+ 39656 ChimerSeq STARFusion TCGA_RNA-Seq WNK1-IQSEC3 WNK1 chr12 863490 + IQSEC3 chr12 234799 + Exonic hg19 OV TCGA-24-0970-01B 5 7 Out-of-frame Intra-chr p13.33 Seq+ 39657 ChimerSeq STARFusion TCGA_RNA-Seq RAB7A-IGF2 RAB7A chr3 128532403 + IGF2 chr11 2153269 - Exonic hg19 OV TCGA-24-0970-01B 3 13 Out-of-frame Inter-chr q21.3 Tumor suppressor gene p15.5 Oncogene 39658 ChimerSeq STARFusion TCGA_RNA-Seq SRP14-IGF2 SRP14 chr15 40328628 - IGF2 chr11 2152887 - Exonic hg19 OV TCGA-24-0970-01B 4 7 Out-of-frame Inter-chr q15.1 p15.5 Oncogene 39659 ChimerSeq STARFusion TCGA_RNA-Seq CBX1-IGF2 CBX1 chr17 46147649 - IGF2 chr11 2152932 - Exonic hg19 OV TCGA-24-0970-01B 3 9 Out-of-frame Inter-chr q21.32 p15.5 Oncogene 39660 ChimerSeq STARFusion TCGA_RNA-Seq TNPO3-IGF2 TNPO3 chr7 128595089 - IGF2 chr11 2152948 - Exonic hg19 OV TCGA-24-0970-01B 3 8 Out-of-frame Inter-chr q32.1 p15.5 Oncogene 39661 ChimerSeq STARFusion TCGA_RNA-Seq TNPO3-IGF2 TNPO3 chr7 128595083 - IGF2 chr11 2153037 - Exonic hg19 OV TCGA-24-0970-01B 3 8 Out-of-frame Inter-chr q32.1 p15.5 Oncogene 39662 ChimerSeq STARFusion TCGA_RNA-Seq MRPL54-TJP3 MRPL54 chr19 3767384 + TJP3 chr19 3750136 + Exonic hg19 OV TCGA-13-0801-01A 110 22 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 39663 ChimerSeq STARFusion TCGA_RNA-Seq ZNF678-LINC00276 ZNF678 chr1 227770307 + LINC00276 chr2 13981739 - Exonic hg19 OV TCGA-13-0801-01A 108 2 Out-of-frame Inter-chr q42.13 Transcription factor p24.3 39664 ChimerSeq STARFusion TCGA_RNA-Seq EHD1-ATG2A EHD1 chr11 64645533 - ATG2A chr11 64662681 - Exonic hg19 OV TCGA-13-0801-01A 70 33 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 39665 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN31-OS9 TSPAN31 chr12 58142999 + OS9 chr12 58109543 + Exonic hg19 OV TCGA-13-0801-01A 58 16 3'UTR-CDS Intra-chr q14.1 q13.3 Seq+ 39666 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-13-0801-01A 54 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39667 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-13-0801-01A 51 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39668 ChimerSeq STARFusion TCGA_RNA-Seq RFX1-CCDC107 RFX1 chr19 14104337 - CCDC107 chr9 35658573 + Exonic hg19 OV TCGA-13-0801-01A 44 23 In-Frame Inter-chr p13.12 Transcription factor p13.3 Seq+ 39669 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-LRRC43 MAP4 chr3 48130263 - LRRC43 chr12 122674677 + Exonic hg19 OV TCGA-13-0801-01A 44 12 5'UTR-CDS Inter-chr p21.31 q24.31 Seq+ 39670 ChimerSeq STARFusion TCGA_RNA-Seq KDM3A-LTBP1 KDM3A chr2 86694006 + LTBP1 chr2 33614251 + Exonic hg19 OV TCGA-13-0801-01A 44 5 In-Frame Intra-chr p11.2 Tumor suppressor gene p22.3 Seq+ 39671 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-13-0801-01A 34 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 39672 ChimerSeq STARFusion TCGA_RNA-Seq MECOM-LRRC31 MECOM chr3 169381124 - LRRC31 chr3 169587660 - Exonic hg19 OV TCGA-13-0801-01A 27 3 5'UTR-5'UTR Intra-chr q26.2 Transcription factor q26.2 Seq+ 39673 ChimerSeq STARFusion TCGA_RNA-Seq DOT1L-OAZ1 DOT1L chr19 2164264 + OAZ1 chr19 2271781 + Exonic hg19 OV TCGA-13-0801-01A 25 6 In-Frame Intra-chr p13.3 Oncogene Transcription factor p13.3 Seq+ 39674 ChimerSeq STARFusion TCGA_RNA-Seq CHCHD3-BDH1 CHCHD3 chr7 132709306 - BDH1 chr3 197249652 - Exonic hg19 OV TCGA-13-0801-01A 24 3 Out-of-frame Inter-chr q33 Transcription factor Seq+ 39675 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469662 + FTH1P27 chrX 37364954 + Exonic hg19 OV TCGA-13-0801-01A 23 0 Out-of-frame Inter-chr q13.33 p21.1 39676 ChimerSeq STARFusion TCGA_RNA-Seq ZNF678-LINC00276 ZNF678 chr1 227751425 + LINC00276 chr2 13981739 - Exonic hg19 OV TCGA-13-0801-01A 21 2 Out-of-frame Inter-chr q42.13 Transcription factor p24.3 39677 ChimerSeq STARFusion TCGA_RNA-Seq DDX3X-NYX DDX3X chrX 41198336 + NYX chrX 41306681 + Exonic hg19 OV TCGA-13-0801-01A 21 1 CDS-5'UTR Intra-chr p11.4 Tumor suppressor gene p11.4 39678 ChimerSeq STARFusion TCGA_RNA-Seq USP39-VAMP8 USP39 chr2 85830204 + VAMP8 chr2 85808699 + Exonic hg19 OV TCGA-13-0801-01A 19 9 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 39679 ChimerSeq STARFusion TCGA_RNA-Seq HAP1-TMSB10 HAP1 chr17 39877796 - TMSB10 chr2 85132808 + Exonic hg19 OV TCGA-13-0801-01A 20 0 Out-of-frame Inter-chr q21.2 p11.2 39680 ChimerSeq STARFusion TCGA_RNA-Seq MAST2-CLDN14 MAST2 chr1 46295253 + CLDN14 chr21 37882798 - Exonic hg19 OV TCGA-13-0801-01A 17 8 CDS-5'UTR Inter-chr p34.1 AGC:MAST q22.13 Seq+ 39681 ChimerSeq STARFusion TCGA_RNA-Seq EHD1-ATG2A EHD1 chr11 64645533 - ATG2A chr11 64662914 - Exonic hg19 OV TCGA-13-0801-01A 10 33 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 39682 ChimerSeq STARFusion TCGA_RNA-Seq MAST2-CLDN14 MAST2 chr1 46295253 + CLDN14 chr21 37834074 - Exonic hg19 OV TCGA-13-0801-01A 16 8 CDS-5'UTR Inter-chr p34.1 AGC:MAST q22.13 Seq+ 39683 ChimerSeq STARFusion TCGA_RNA-Seq RFX1-CCDC107 RFX1 chr19 14116915 - CCDC107 chr9 35658573 + Exonic hg19 OV TCGA-13-0801-01A 9 23 5'UTR-CDS Inter-chr p13.12 Transcription factor p13.3 Seq+ 39684 ChimerSeq STARFusion TCGA_RNA-Seq USP39-VAMP8 USP39 chr2 85830204 + VAMP8 chr2 85808877 + Exonic hg19 OV TCGA-13-0801-01A 9 9 5'UTR-3'UTR Intra-chr p11.2 p11.2 Seq+ 39685 ChimerSeq STARFusion TCGA_RNA-Seq USP39-VAMP8 USP39 chr2 85830204 + VAMP8 chr2 85806132 + Exonic hg19 OV TCGA-13-0801-01A 9 9 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 39686 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-24-1849-01A 15 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39687 ChimerSeq STARFusion TCGA_RNA-Seq NUP214-CACNA1B NUP214 chr9 134039531 + CACNA1B chr9 141006850 + Exonic hg19 OV TCGA-24-1849-01A 14 4 In-Frame Intra-chr q34.13 Oncogene q34.3 Seq+ 39688 ChimerSeq STARFusion TCGA_RNA-Seq LGR6-RNPEP LGR6 chr1 202163329 + RNPEP chr1 201965275 + Exonic hg19 OV TCGA-23-1122-01A 43 18 In-Frame Intra-chr q32.1 q32.1 Seq+ 39689 ChimerSeq STARFusion TCGA_RNA-Seq PTPN14-ANKRD44 PTPN14 chr1 214537855 - ANKRD44 chr2 197832170 - Exonic hg19 OV TCGA-23-1122-01A 42 15 CDS-3'UTR Inter-chr q41 q33.1 Seq+ 39690 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-23-1122-01A 44 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39691 ChimerSeq STARFusion TCGA_RNA-Seq UTRN-TBC1D31 UTRN chr6 145161968 + TBC1D31 chr8 124162276 + Exonic hg19 OV TCGA-23-1122-01A 33 17 Out-of-frame Inter-chr q24.2 q24.13 Seq+ 39692 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-23-1122-01A 27 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 39693 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0195-TTYH2 KIAA0195 chr17 73452832 + TTYH2 chr17 72227027 + Exonic hg19 OV TCGA-23-1122-01A 21 21 5'UTR-CDS Intra-chr q25.1 Seq+ 39694 ChimerSeq STARFusion TCGA_RNA-Seq FAM35BP-KMT2C FAM35BP chr10 46914612 + KMT2C chr7 151856157 - Exonic hg19 OV TCGA-23-1122-01A 15 12 Out-of-frame Inter-chr q11.22 q36.1 Oncogene Tumor suppressor gene 39695 ChimerSeq STARFusion TCGA_RNA-Seq IKBIP-NR2C1 IKBIP chr12 99028074 - NR2C1 chr12 95445719 - Exonic hg19 OV TCGA-23-1122-01A 12 4 In-Frame Intra-chr q23.1 q22 Transcription factor Seq+ 39696 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-23-1122-01A 12 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39697 ChimerSeq STARFusion TCGA_RNA-Seq KDM3A-SUCLG2 KDM3A chr2 86669356 + SUCLG2 chr3 67660020 - Exonic hg19 OV TCGA-23-1122-01A 10 7 In-Frame Inter-chr p11.2 Tumor suppressor gene p14.1 Seq+ 39698 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0195-TTYH2 KIAA0195 chr17 73453558 + TTYH2 chr17 72227027 + Exonic hg19 OV TCGA-23-1122-01A 3 21 5'UTR-CDS Intra-chr q25.1 Seq+ 39699 ChimerSeq STARFusion TCGA_RNA-Seq BMP7-RBM38 BMP7 chr20 55749987 - RBM38 chr20 55982599 + Exonic hg19 OV TCGA-24-2288-01A 476 36 Out-of-frame Intra-chr q13.31 q13.31 Tumor suppressor gene Seq+ 39700 ChimerSeq STARFusion TCGA_RNA-Seq SPON1-STXBP6 SPON1 chr11 13984689 + STXBP6 chr14 25326363 - Exonic hg19 OV TCGA-24-2288-01A 196 14 In-Frame Inter-chr p15.2 q12 Seq+ 39701 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPK-UBQLN1 HNRNPK chr9 86591910 - UBQLN1 chr9 86301070 - Exonic hg19 OV TCGA-24-2288-01A 197 7 In-Frame Intra-chr q21.32 q21.32 Seq+ 39702 ChimerSeq STARFusion TCGA_RNA-Seq TOR1AIP2-ACBD6 TOR1AIP2 chr1 179846374 - ACBD6 chr1 180283857 - Exonic hg19 OV TCGA-24-2288-01A 72 5 5'UTR-CDS Intra-chr q25.2 q25.3 Seq+ 39703 ChimerSeq STARFusion TCGA_RNA-Seq SETD5-CIDEC SETD5 chr3 9466210 + CIDEC chr3 9920195 - Exonic hg19 OV TCGA-24-2288-01A 70 5 5'UTR-5'UTR Intra-chr p25.3 p25.3 Seq+ 39704 ChimerSeq STARFusion TCGA_RNA-Seq CYTH3-USP42 CYTH3 chr7 6226681 - USP42 chr7 6199081 + Exonic hg19 OV TCGA-24-2288-01A 40 14 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 39705 ChimerSeq STARFusion TCGA_RNA-Seq TNS3-SUN3 TNS3 chr7 47621649 - SUN3 chr7 48035743 - Exonic hg19 OV TCGA-24-2288-01A 31 2 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 39706 ChimerSeq STARFusion TCGA_RNA-Seq TNS3-SUN3 TNS3 chr7 47622025 - SUN3 chr7 48035743 - Exonic hg19 OV TCGA-24-2288-01A 29 2 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 39707 ChimerSeq STARFusion TCGA_RNA-Seq GATSL2-TYW1B GATSL2 chr7 74867229 - TYW1B chr7 72209578 - Exonic hg19 OV TCGA-24-2288-01A 19 3 Out-of-frame Intra-chr q11.23 39708 ChimerSeq STARFusion TCGA_RNA-Seq TNS3-SUN3 TNS3 chr7 47622025 - SUN3 chr7 48028477 - Exonic hg19 OV TCGA-24-2288-01A 19 2 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 39709 ChimerSeq STARFusion TCGA_RNA-Seq SETD5-CIDEC SETD5 chr3 9466210 + CIDEC chr3 9920738 - Exonic hg19 OV TCGA-24-2288-01A 17 4 5'UTR-5'UTR Intra-chr p25.3 p25.3 Seq+ 39710 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R2A-DHTKD1 PPP2R2A chr8 26151256 + DHTKD1 chr10 12123471 + Exonic hg19 OV TCGA-24-2288-01A 17 0 In-Frame Inter-chr p21.2 p14 Seq+ 39711 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-TRAP1 CREBBP chr16 3929833 - TRAP1 chr16 3740986 - Exonic hg19 OV TCGA-24-2288-01A 14 1 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 39712 ChimerSeq STARFusion TCGA_RNA-Seq NCOA3-LRRC49 NCOA3 chr20 46130763 + LRRC49 chr15 71302146 + Exonic hg19 OV TCGA-24-2288-01A 14 0 5'UTR-CDS Inter-chr q13.12 Transcription factor q23 Seq+ 39713 ChimerSeq STARFusion TCGA_RNA-Seq C10orf11-MYO1D C10orf11 chr10 77818541 + MYO1D chr17 30821933 - Exonic hg19 OV TCGA-24-2288-01A 10 2 Out-of-frame Inter-chr q11.2 Seq+ 39714 ChimerSeq STARFusion TCGA_RNA-Seq TNS3-HUS1 TNS3 chr7 47568634 - HUS1 chr7 48015284 - Exonic hg19 OV TCGA-24-2288-01A 10 0 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 39715 ChimerSeq STARFusion TCGA_RNA-Seq PHF20-EPB41L1 PHF20 chr20 34389527 + EPB41L1 chr20 34785781 + Exonic hg19 OV TCGA-24-2288-01A 9 0 Out-of-frame Intra-chr q11.22 Transcription factor q11.23 Seq+ 39716 ChimerSeq STARFusion TCGA_RNA-Seq CAMK1D-BNIP3L CAMK1D chr10 12391909 + BNIP3L chr8 26248759 + Exonic hg19 OV TCGA-24-2288-01A 8 1 Out-of-frame Inter-chr p13 p21.2 Tumor suppressor gene Seq+ 39717 ChimerSeq STARFusion TCGA_RNA-Seq PPFIBP1-MRPS35 PPFIBP1 chr12 27677298 + MRPS35 chr12 27867713 + Exonic hg19 OV TCGA-24-2288-01A 8 1 5'UTR-CDS Intra-chr p11.23 p11.22 39718 ChimerSeq STARFusion TCGA_RNA-Seq WNK1-ERC1 WNK1 chr12 863490 + ERC1 chr12 1192330 + Exonic hg19 OV TCGA-24-2288-01A 8 1 In-Frame Intra-chr p13.33 Seq+ 39719 ChimerSeq STARFusion TCGA_RNA-Seq SRGAP3-JAGN1 SRGAP3 chr3 9290569 - JAGN1 chr3 9934599 + Exonic hg19 OV TCGA-24-2288-01A 7 1 Out-of-frame Intra-chr p25.3 Tumor suppressor gene p25.3 39720 ChimerSeq STARFusion TCGA_RNA-Seq ARF3-IGL@ ARF3 chr12 49329932 - IGL@ chr22 23247175 + Exonic hg19 OV TCGA-24-2288-01A 7 0 Out-of-frame Inter-chr q13.12 q11.22 39721 ChimerSeq STARFusion TCGA_RNA-Seq ARF3-IGLC3 ARF3 chr12 49329932 - IGLC3 chr22 23247175 + Exonic hg19 OV TCGA-24-2288-01A 7 0 Out-of-frame Inter-chr q13.12 q11.22 39722 ChimerSeq STARFusion TCGA_RNA-Seq ARF3-IGLJ3 ARF3 chr12 49329932 - IGLJ3 chr22 23247175 + Exonic hg19 OV TCGA-24-2288-01A 7 0 Out-of-frame Inter-chr q13.12 q11.22 39723 ChimerSeq STARFusion TCGA_RNA-Seq SORL1-TECTA SORL1 chr11 121416138 + TECTA chr11 121023590 + Exonic hg19 OV TCGA-24-2288-01A 7 0 Out-of-frame Intra-chr q24.1 q23.3 Seq+ 39724 ChimerSeq STARFusion TCGA_RNA-Seq TNS3-SUN3 TNS3 chr7 47621649 - SUN3 chr7 48028477 - Exonic hg19 OV TCGA-24-2288-01A 6 2 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 39725 ChimerSeq STARFusion TCGA_RNA-Seq GATSL2-TYW1B GATSL2 chr7 74867229 - TYW1B chr7 72178756 - Exonic hg19 OV TCGA-24-2288-01A 5 3 Out-of-frame Intra-chr q11.23 39726 ChimerSeq STARFusion TCGA_RNA-Seq H19-IGF2 H19 chr11 2018486 - IGF2 chr11 2159921 - Exonic hg19 OV TCGA-24-2288-01A 3 5 Out-of-frame Intra-chr p15.5 Tumor suppressor gene p15.5 Oncogene 39727 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2NL-UBE2H NOTCH2NL chr1 145209436 + UBE2H chr7 129498781 - Exonic hg19 OV TCGA-25-1323-01A 117 27 5'UTR-5'UTR Inter-chr q21.1 q32.2 Seq+ 39728 ChimerSeq STARFusion TCGA_RNA-Seq URI1-VSTM2B URI1 chr19 30477324 + VSTM2B chr19 30054753 + Exonic hg19 OV TCGA-25-1323-01A 90 34 In-Frame Intra-chr q12 q12 39729 ChimerSeq STARFusion TCGA_RNA-Seq URI1-VSTM2B URI1 chr19 30496615 + VSTM2B chr19 30054753 + Exonic hg19 OV TCGA-25-1323-01A 87 34 In-Frame Intra-chr q12 q12 39730 ChimerSeq STARFusion TCGA_RNA-Seq CLIP4-BRE CLIP4 chr2 29344387 + BRE chr2 28521205 + Exonic hg19 OV TCGA-25-1323-01A 66 30 In-Frame Intra-chr p23.2 Seq+ 39731 ChimerSeq STARFusion TCGA_RNA-Seq USP6NL-RNF216 USP6NL chr10 11639630 - RNF216 chr7 5663756 - Exonic hg19 OV TCGA-25-1323-01A 29 12 Out-of-frame Inter-chr p14 p22.1 Seq+ 39732 ChimerSeq STARFusion TCGA_RNA-Seq AGAP3-SPP2 AGAP3 chr7 150825771 + SPP2 chr2 234978572 + Exonic hg19 OV TCGA-25-1323-01A 31 3 Out-of-frame Inter-chr q36.1 q37.1 Seq+ 39733 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2NL-UBE2H NOTCH2NL chr1 145209436 + UBE2H chr7 129479175 - Exonic hg19 OV TCGA-25-1323-01A 19 27 5'UTR-CDS Inter-chr q21.1 q32.2 Seq+ 39734 ChimerSeq STARFusion TCGA_RNA-Seq BCL2L11-CCDC170 BCL2L11 chr2 111907724 + CCDC170 chr6 151894309 + Exonic hg19 OV TCGA-25-1323-01A 22 2 In-Frame Inter-chr q13 Tumor suppressor gene q25.1 Seq+ 39735 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L1-SP2 NFE2L1 chr17 46134864 + SP2 chr17 46000328 + Exonic hg19 OV TCGA-25-1323-01A 19 4 In-Frame Intra-chr q21.32 Transcription factor q21.32 Transcription factor Seq+ 39736 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2B-S100A8 GATAD2B chr1 153895209 - S100A8 chr1 153363033 - Exonic hg19 OV TCGA-25-1323-01A 13 13 5'UTR-5'UTR Intra-chr Transcription factor q21.3 Seq+ 39737 ChimerSeq STARFusion TCGA_RNA-Seq NCKAP1-FRZB NCKAP1 chr2 183888534 - FRZB chr2 183723561 - Exonic hg19 OV TCGA-25-1323-01A 14 1 Out-of-frame Intra-chr q32.1 q32.1 39738 ChimerSeq STARFusion TCGA_RNA-Seq TCF20-POLDIP3 TCF20 chr22 42739485 - POLDIP3 chr22 42999166 - Exonic hg19 OV TCGA-25-1323-01A 9 7 5'UTR-CDS Intra-chr Transcription factor q13.2 39739 ChimerSeq STARFusion TCGA_RNA-Seq OVOL2-DZANK1 OVOL2 chr20 18037301 - DZANK1 chr20 18371103 - Exonic hg19 OV TCGA-25-1323-01A 10 1 In-Frame Intra-chr p11.23 Transcription factor p11.23 Seq+ 39740 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734946 - ZFHX3 chr16 72821631 - Exonic hg19 OV TCGA-25-1323-01A 10 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39741 ChimerSeq STARFusion TCGA_RNA-Seq SFXN2-SUFU SFXN2 chr10 104474438 + SUFU chr10 104352339 + Exonic hg19 OV TCGA-25-1323-01A 8 6 5'UTR-CDS Intra-chr q24.32 q24.32 Oncogene Tumor suppressor gene Seq+ 39742 ChimerSeq STARFusion TCGA_RNA-Seq KNSTRN-BUB1B KNSTRN chr15 40684224 + BUB1B chr15 40498385 + Exonic hg19 OV TCGA-25-1323-01A 7 5 Out-of-frame Intra-chr q15.1 Oncogene q15.1 Oncogene Seq+ 39743 ChimerSeq STARFusion TCGA_RNA-Seq SRP14-IGF2 SRP14 chr15 40328621 - IGF2 chr11 2153285 - Exonic hg19 OV TCGA-25-1323-01A 4 10 Out-of-frame Inter-chr q15.1 p15.5 Oncogene 39744 ChimerSeq STARFusion TCGA_RNA-Seq DFNB31-LTA DFNB31 chr9 117266464 - LTA chr6 31540511 + Exonic hg19 OV TCGA-25-1323-01A 4 5 CDS-5'UTR Inter-chr 39745 ChimerSeq STARFusion TCGA_RNA-Seq ZNF786-ABCF2 ZNF786 chr7 148787715 - ABCF2 chr7 150913115 - Exonic hg19 OV TCGA-25-1323-01A 4 5 In-Frame Intra-chr q36.1 Transcription factor q36.1 Seq+ 39746 ChimerSeq STARFusion TCGA_RNA-Seq ERP27-IGF2 ERP27 chr12 15067533 - IGF2 chr11 2152835 - Exonic hg19 OV TCGA-25-1323-01A 3 7 Out-of-frame Inter-chr p12.3 p15.5 Oncogene Seq+ 39747 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPC-OR5AU1 HNRNPC chr14 21731470 - OR5AU1 chr14 21624045 - Exonic hg19 OV TCGA-13-1481-01A 51 9 5'UTR-CDS Intra-chr q11.2 q11.2 39748 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-13-1481-01A 39 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39749 ChimerSeq STARFusion TCGA_RNA-Seq FUS-KAT8 FUS chr16 31191548 + KAT8 chr16 31138356 + Exonic hg19 OV TCGA-13-1481-01A 24 22 Out-of-frame Intra-chr p11.2 Tumor suppressor gene p11.2 Seq+ 39750 ChimerSeq STARFusion TCGA_RNA-Seq C6orf223-SCAND1 C6orf223 chr6 43968437 + SCAND1 chr20 34542613 - Exonic hg19 OV TCGA-13-1481-01A 20 17 CDS-5'UTR Inter-chr p21.1 q11.23 Seq+ 39751 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-RERE IGH@ chr14 106725202 - RERE chr1 8763164 - Exonic hg19 OV TCGA-13-1481-01A 22 1 Out-of-frame Inter-chr 32.33 p36.23 39752 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-PTK2 AGO2 chr8 141645584 - PTK2 chr8 141685598 - Exonic hg19 OV TCGA-13-1481-01A 17 13 Out-of-frame Intra-chr q24.3 q24.3 39753 ChimerSeq STARFusion TCGA_RNA-Seq SAE1-GRAP2 SAE1 chr19 47634285 + GRAP2 chr22 40351823 + Exonic hg19 OV TCGA-13-1481-01A 16 5 Out-of-frame Inter-chr q13.32 q13.1 Seq+ 39754 ChimerSeq STARFusion TCGA_RNA-Seq SCRIB-EEF1D SCRIB chr8 144890779 - EEF1D chr8 144672251 - Exonic hg19 OV TCGA-13-1481-01A 9 14 CDS-5'UTR Intra-chr Tumor suppressor gene Seq+ 39755 ChimerSeq STARFusion TCGA_RNA-Seq NDUFV2-SOGA2 NDUFV2 chr18 9102795 + SOGA2 chr18 8831605 + Exonic hg19 OV TCGA-13-1481-01A 9 5 CDS-3'UTR Intra-chr p11.22 39756 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPC-OR5AU1 HNRNPC chr14 21730760 - OR5AU1 chr14 21624045 - Exonic hg19 OV TCGA-13-1481-01A 7 9 Out-of-frame Intra-chr q11.2 q11.2 39757 ChimerSeq STARFusion TCGA_RNA-Seq SCRIB-EEF1D SCRIB chr8 144890779 - EEF1D chr8 144669022 - Exonic hg19 OV TCGA-13-1481-01A 6 13 Out-of-frame Intra-chr Tumor suppressor gene Seq+ 39758 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-13-1408-01A 40 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39759 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-13-1408-01A 39 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39760 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069803 - Exonic hg19 OV TCGA-13-1408-01A 30 0 Out-of-frame Inter-chr q12.3 q32.2 39761 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-13-1408-01A 27 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 39762 ChimerSeq STARFusion TCGA_RNA-Seq ALDH3A2-IFNK ALDH3A2 chr17 19575269 + IFNK chr9 27526005 + Exonic hg19 OV TCGA-13-1408-01A 12 11 CDS-3'UTR Inter-chr p11.2 p21.2 Seq+ 39763 ChimerSeq STARFusion TCGA_RNA-Seq MLLT4-UNC93A MLLT4 chr6 168227917 + UNC93A chr6 167717407 + Exonic hg19 OV TCGA-13-1408-01A 13 3 Out-of-frame Intra-chr q27 Seq+ 39764 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A6-IGF2 SLC25A6 chrX 1505479 - IGF2 chr11 2153334 - Exonic hg19 OV TCGA-13-1408-01A 3 34 Out-of-frame Inter-chr p22.33 p15.5 Oncogene 39765 ChimerSeq STARFusion TCGA_RNA-Seq COL1A1-IGF2 COL1A1 chr17 48262644 - IGF2 chr11 2153809 - Exonic hg19 OV TCGA-13-1408-01A 5 21 Out-of-frame Inter-chr q21.33 Oncogene p15.5 Oncogene 39766 ChimerSeq STARFusion TCGA_RNA-Seq RBMX-ARHGEF6 RBMX chrX 135957245 - ARHGEF6 chrX 135750328 - Exonic hg19 OV TCGA-13-1408-01A 8 7 In-Frame Intra-chr q26.3 Tumor suppressor gene q26.3 39767 ChimerSeq STARFusion TCGA_RNA-Seq RPS4X-IGF2 RPS4X chrX 71492532 - IGF2 chr11 2152009 - Exonic hg19 OV TCGA-13-1408-01A 7 7 Out-of-frame Inter-chr q13.1 p15.5 Oncogene 39768 ChimerSeq STARFusion TCGA_RNA-Seq COL1A1-IGF2 COL1A1 chr17 48262635 - IGF2 chr11 2153805 - Exonic hg19 OV TCGA-13-1408-01A 3 21 Out-of-frame Inter-chr q21.33 Oncogene p15.5 Oncogene 39769 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A6-IGF2 SLC25A6 chrX 1505477 - IGF2 chr11 2152941 - Exonic hg19 OV TCGA-13-1408-01A 3 16 Out-of-frame Inter-chr p22.33 p15.5 Oncogene 39770 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA7-SERGEF PLEKHA7 chr11 17035536 - SERGEF chr11 17809960 - Exonic hg19 OV TCGA-61-2000-01A 70 7 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 39771 ChimerSeq STARFusion TCGA_RNA-Seq FKBP8-MEF2B FKBP8 chr19 18649026 - MEF2B chr19 19258641 - Exonic hg19 OV TCGA-61-2000-01A 45 4 Out-of-frame Intra-chr p13.11 p13.11 Transcription factor Seq+ 39772 ChimerSeq STARFusion TCGA_RNA-Seq EXO1-WDR64 EXO1 chr1 242013888 + WDR64 chr1 241951151 + Exonic hg19 OV TCGA-61-2000-01A 35 0 In-Frame Intra-chr q43 q43 Seq+ 39773 ChimerSeq STARFusion TCGA_RNA-Seq PARD3-CUL2 PARD3 chr10 34985246 - CUL2 chr10 35324224 - Exonic hg19 OV TCGA-61-2000-01A 28 1 Out-of-frame Intra-chr p11.21 p11.21 Tumor suppressor gene Seq+ 39774 ChimerSeq STARFusion TCGA_RNA-Seq RNF135-RAB11FIP4 RNF135 chr17 29298463 + RAB11FIP4 chr17 29844669 + Exonic hg19 OV TCGA-61-2000-01A 27 3 In-Frame Intra-chr q11.2 q11.2 Seq+ 39775 ChimerSeq STARFusion TCGA_RNA-Seq FBXW11-STK10 FBXW11 chr5 171433462 - STK10 chr5 171554425 - Exonic hg19 OV TCGA-61-2000-01A 22 4 In-Frame Intra-chr q35.1 q35.1 Tumor suppressor gene 39776 ChimerSeq STARFusion TCGA_RNA-Seq KCMF1-TMSB10 KCMF1 chr2 85282383 + TMSB10 chr2 85132774 + Exonic hg19 OV TCGA-61-2000-01A 18 7 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 39777 ChimerSeq STARFusion TCGA_RNA-Seq BIRC6-BRE BIRC6 chr2 32582554 + BRE chr2 28352138 + Exonic hg19 OV TCGA-61-2000-01A 17 3 Out-of-frame Intra-chr p22.3 Seq+ 39778 ChimerSeq STARFusion TCGA_RNA-Seq RPS17-SPP1 RPS17 chr15 82823332 - SPP1 chr4 88896869 + Exonic hg19 OV TCGA-61-2000-01A 14 4 Out-of-frame Inter-chr q25.2 q22.1 39779 ChimerSeq STARFusion TCGA_RNA-Seq HBP1-LHFPL3 HBP1 chr7 106809472 + LHFPL3 chr7 104377122 + Exonic hg19 OV TCGA-61-2000-01A 10 1 Out-of-frame Intra-chr Tumor suppressor gene Transcription factor q22.2 Seq+ 39780 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-61-2000-01A 10 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39781 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-61-2000-01A 10 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39782 ChimerSeq STARFusion TCGA_RNA-Seq TTC28-EIF4ENIF1 TTC28 chr22 29025540 - EIF4ENIF1 chr22 31867903 - Exonic hg19 OV TCGA-61-2000-01A 10 0 In-Frame Intra-chr q12.1 q12.2 39783 ChimerSeq STARFusion TCGA_RNA-Seq KCMF1-TMSB10 KCMF1 chr2 85276771 + TMSB10 chr2 85132794 + Exonic hg19 OV TCGA-61-2000-01A 8 7 CDS-5'UTR Intra-chr p11.2 Transcription factor p11.2 39784 ChimerSeq STARFusion TCGA_RNA-Seq KCMF1-TMSB10 KCMF1 chr2 85280370 + TMSB10 chr2 85132794 + Exonic hg19 OV TCGA-61-2000-01A 8 7 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 39785 ChimerSeq STARFusion TCGA_RNA-Seq FBXW11-STK10 FBXW11 chr5 171423894 - STK10 chr5 171554425 - Exonic hg19 OV TCGA-61-2000-01A 7 4 Out-of-frame Intra-chr q35.1 q35.1 Tumor suppressor gene 39786 ChimerSeq STARFusion TCGA_RNA-Seq ADD1-FAM193A ADD1 chr4 2845751 + FAM193A chr4 2733502 + Exonic hg19 OV TCGA-29-1693-01A 61 8 5'UTR-5'UTR Intra-chr p16.3 p16.3 Seq+ 39787 ChimerSeq STARFusion TCGA_RNA-Seq SYNE4-THAP8 SYNE4 chr19 36497425 - THAP8 chr19 36530466 - Exonic hg19 OV TCGA-29-1693-01A 33 6 Out-of-frame Intra-chr q13.12 q13.12 Transcription factor Seq+ 39788 ChimerSeq STARFusion TCGA_RNA-Seq PHLDB1-ARCN1 PHLDB1 chr11 118495775 + ARCN1 chr11 118453894 + Exonic hg19 OV TCGA-29-1693-01A 30 1 Out-of-frame Intra-chr q23.3 q23.3 39789 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-29-1693-01A 16 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39790 ChimerSeq STARFusion TCGA_RNA-Seq GNAZ-MIF GNAZ chr22 23412756 + MIF chr22 24236959 + Exonic hg19 OV TCGA-24-2019-01A 135 12 5'UTR-CDS Intra-chr q11.22 q11.23 Tumor suppressor gene Seq+ 39791 ChimerSeq STARFusion TCGA_RNA-Seq ST3GAL2-CATSPERB ST3GAL2 chr16 70472852 - CATSPERB chr14 92047451 - Exonic hg19 OV TCGA-24-2019-01A 72 14 5'UTR-CDS Inter-chr q22.1 Seq+ 39792 ChimerSeq STARFusion TCGA_RNA-Seq LPIN2-RFPL1 LPIN2 chr18 3003429 - RFPL1 chr22 29834934 + Exonic hg19 OV TCGA-24-2019-01A 66 36 Out-of-frame Inter-chr p11.31 q12.2 Seq+ 39793 ChimerSeq STARFusion TCGA_RNA-Seq MOB2-C11orf89 MOB2 chr11 1492525 - C11orf89 chr11 1911823 - Exonic hg19 OV TCGA-24-2019-01A 41 9 Out-of-frame Intra-chr p15.5 39794 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC21-PSIP1 ZDHHC21 chr9 14680031 - PSIP1 chr9 15472748 - Exonic hg19 OV TCGA-24-2019-01A 40 6 5'UTR-CDS Intra-chr p22.3 p22.3 Oncogene Seq+ 39795 ChimerSeq STARFusion TCGA_RNA-Seq CTDSPL2-CASC4 CTDSPL2 chr15 44751398 + CASC4 chr15 44671888 + Exonic hg19 OV TCGA-24-2019-01A 38 5 Out-of-frame Intra-chr q15.3 q15.3 Seq+ 39796 ChimerSeq STARFusion TCGA_RNA-Seq NXN-WWOX NXN chr17 882559 - WWOX chr16 79245505 + Exonic hg19 OV TCGA-24-2019-01A 23 4 In-Frame Inter-chr p13.3 q23.1 Tumor suppressor gene Seq+ 39797 ChimerSeq STARFusion TCGA_RNA-Seq PRUNE-VPS45 PRUNE chr1 151001420 + VPS45 chr1 150116887 + Exonic hg19 OV TCGA-24-2019-01A 15 3 Out-of-frame Intra-chr q21.2 Seq+ 39798 ChimerSeq STARFusion TCGA_RNA-Seq SH3PXD2A-RB1 SH3PXD2A chr10 105371338 - RB1 chr13 49039134 + Exonic hg19 OV TCGA-24-1469-01A 93 54 In-Frame Inter-chr q24.33 q14.2 Oncogene Tumor suppressor gene Seq+ 39799 ChimerSeq STARFusion TCGA_RNA-Seq MCL1-CTSS MCL1 chr1 150551319 - CTSS chr1 150720355 - Exonic hg19 OV TCGA-24-1469-01A 34 23 In-Frame Intra-chr q21.2 Oncogene q21.3 Seq+ 39800 ChimerSeq STARFusion TCGA_RNA-Seq INTS4-LGALS3BP INTS4 chr11 77705636 - LGALS3BP chr17 76968786 - Exonic hg19 OV TCGA-24-1469-01A 30 33 Out-of-frame Inter-chr q14.1 q25.3 Seq+ 39801 ChimerSeq STARFusion TCGA_RNA-Seq HMGCS1-PAIP1 HMGCS1 chr5 43307868 - PAIP1 chr5 43527571 - Exonic hg19 OV TCGA-24-1469-01A 25 10 5'UTR-CDS Intra-chr p12 p12 Seq+ 39802 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-1469-01A 26 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39803 ChimerSeq STARFusion TCGA_RNA-Seq MOB3B-CAAP1 MOB3B chr9 27529553 - CAAP1 chr9 26861137 - Exonic hg19 OV TCGA-24-1469-01A 23 4 5'UTR-CDS Intra-chr p21.2 p21.2 Seq+ 39804 ChimerSeq STARFusion TCGA_RNA-Seq MECOM-LRRC31 MECOM chr3 169381124 - LRRC31 chr3 169587660 - Exonic hg19 OV TCGA-24-1469-01A 15 3 5'UTR-5'UTR Intra-chr q26.2 Transcription factor q26.2 Seq+ 39805 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-CCDC170 ESR1 chr6 152332929 + CCDC170 chr6 151907024 + Exonic hg19 OV TCGA-24-1469-01A 13 8 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 KB Pub Seq+ 39806 ChimerSeq STARFusion TCGA_RNA-Seq GTF2I-POM121 GTF2I chr7 74114964 + POM121 chr7 72419457 + Exonic hg19 OV TCGA-24-1469-01A 13 0 CDS-3'UTR Intra-chr q11.23 Transcription factor q11.23 Seq+ 39807 ChimerSeq STARFusion TCGA_RNA-Seq ANTXR1-APLF ANTXR1 chr2 69298919 + APLF chr2 68804952 + Exonic hg19 OV TCGA-24-1469-01A 10 11 In-Frame Intra-chr p13.3 p13.3 Seq+ 39808 ChimerSeq STARFusion TCGA_RNA-Seq DAG1-MAP4 DAG1 chr3 49571113 + MAP4 chr3 47919013 - Exonic hg19 OV TCGA-24-1469-01A 10 10 3'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 39809 ChimerSeq STARFusion TCGA_RNA-Seq INTS4-LGALS3BP INTS4 chr11 77705636 - LGALS3BP chr17 76969304 - Exonic hg19 OV TCGA-24-1469-01A 3 33 Out-of-frame Inter-chr q14.1 q25.3 Seq+ 39810 ChimerSeq STARFusion TCGA_RNA-Seq ACBD6-DDX11L1 ACBD6 chr1 180382501 - DDX11L1 chr1 12010 + Exonic hg19 OV TCGA-24-1469-01A 9 6 CDS-3'UTR Intra-chr q25.3 p36.33 39811 ChimerSeq STARFusion TCGA_RNA-Seq BMP1-FAM160B2 BMP1 chr8 22037996 + FAM160B2 chr8 21951951 + Exonic hg19 OV TCGA-24-1469-01A 10 1 In-Frame Intra-chr p21.3 p21.3 Seq+ 39812 ChimerSeq STARFusion TCGA_RNA-Seq MCL1-CTSS MCL1 chr1 150551319 - CTSS chr1 150722647 - Exonic hg19 OV TCGA-24-1469-01A 4 23 Out-of-frame Intra-chr q21.2 Oncogene q21.3 Seq+ 39813 ChimerSeq STARFusion TCGA_RNA-Seq DHDDS-CD52 DHDDS chr1 26774151 + CD52 chr1 26646662 + Exonic hg19 OV TCGA-24-1469-01A 9 2 Out-of-frame Intra-chr p36.11 p36.11 39814 ChimerSeq STARFusion TCGA_RNA-Seq BAI2-PTP4A2 BAI2 chr1 32221600 - PTP4A2 chr1 32385259 - Exonic hg19 OV TCGA-24-1469-01A 8 5 CDS-5'UTR Intra-chr p35.2 39815 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2IP-SREK1 ERBB2IP chr5 65290692 + SREK1 chr5 65455047 + Exonic hg19 OV TCGA-24-1469-01A 8 4 In-Frame Intra-chr q12.3 Seq+ 39816 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2NL-PARP1 NOTCH2NL chr1 145248894 + PARP1 chr1 226570884 - Exonic hg19 OV TCGA-24-1469-01A 8 2 Out-of-frame Intra-chr q21.1 q42.12 Oncogene Tumor suppressor gene 39817 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-CCDC170 ESR1 chr6 152382259 + CCDC170 chr6 151914242 + Exonic hg19 OV TCGA-24-1469-01A 6 8 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 KB Pub Seq+ 39818 ChimerSeq STARFusion TCGA_RNA-Seq RNF121-FOLR3 RNF121 chr11 71701763 + FOLR3 chr11 71846993 + Exonic hg19 OV TCGA-24-1469-01A 7 3 5'UTR-5'UTR Intra-chr q13.4 q13.4 39819 ChimerSeq STARFusion TCGA_RNA-Seq SOS1-CDKL4 SOS1 chr2 39283843 - CDKL4 chr2 39456729 - Exonic hg19 OV TCGA-24-1469-01A 7 3 CDS-5'UTR Intra-chr p22.1 p22.1 CMGC:CDKL Seq+ 39820 ChimerSeq STARFusion TCGA_RNA-Seq HMGCS1-PAIP1 HMGCS1 chr5 43313458 - PAIP1 chr5 43527571 - Exonic hg19 OV TCGA-24-1469-01A 5 10 5'UTR-CDS Intra-chr p12 p12 Seq+ 39821 ChimerSeq STARFusion TCGA_RNA-Seq HSDL1-CORO1A HSDL1 chr16 84178685 - CORO1A chr16 30196530 + Exonic hg19 OV TCGA-24-1469-01A 6 6 5'UTR-5'UTR Intra-chr q24.1 p11.2 Seq+ 39822 ChimerSeq STARFusion TCGA_RNA-Seq CEP170-SDCCAG8 CEP170 chr1 243385026 - SDCCAG8 chr1 243493842 + Exonic hg19 OV TCGA-24-1469-01A 6 5 In-Frame Intra-chr Seq+ 39823 ChimerSeq STARFusion TCGA_RNA-Seq BAI2-PTP4A2 BAI2 chr1 32229485 - PTP4A2 chr1 32385259 - Exonic hg19 OV TCGA-24-1469-01A 5 5 5'UTR-5'UTR Intra-chr p35.2 39824 ChimerSeq STARFusion TCGA_RNA-Seq ANTXR1-APLF ANTXR1 chr2 69297860 + APLF chr2 68804952 + Exonic hg19 OV TCGA-24-1469-01A 3 11 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 39825 ChimerSeq STARFusion TCGA_RNA-Seq MACF1-BMP8B MACF1 chr1 39854330 + BMP8B chr1 40230489 - Exonic hg19 OV TCGA-24-1469-01A 4 7 Out-of-frame Intra-chr p34.3 p34.2 39826 ChimerSeq STARFusion TCGA_RNA-Seq ANTXR1-APLF ANTXR1 chr2 69271945 + APLF chr2 68804952 + Exonic hg19 OV TCGA-24-1469-01A 2 11 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 39827 ChimerSeq STARFusion TCGA_RNA-Seq MACF1-BMP8B MACF1 chr1 39880149 + BMP8B chr1 40230489 - Exonic hg19 OV TCGA-24-1469-01A 3 7 Out-of-frame Intra-chr p34.3 p34.2 39828 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-CCDC170 ESR1 chr6 152382259 + CCDC170 chr6 151859180 + Exonic hg19 OV TCGA-24-1469-01A 2 8 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 KB Pub Seq+ 39829 ChimerSeq STARFusion TCGA_RNA-Seq PAIP2-UBE2D2 PAIP2 chr5 138677669 + UBE2D2 chr5 138979957 + Exonic hg19 OV TCGA-13-0765-01A 207 220 5'UTR-5'UTR Intra-chr q31.2 Tumor suppressor gene q31.2 Seq+ 39830 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734942 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-13-0765-01A 30 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39831 ChimerSeq STARFusion TCGA_RNA-Seq REC8-RNF31 REC8 chr14 24649112 + RNF31 chr14 24629448 + Exonic hg19 OV TCGA-13-0765-01A 28 6 Out-of-frame Intra-chr q12 q12 Seq+ 39832 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6A-LCMT1 TNRC6A chr16 24762134 + LCMT1 chr16 25066140 + Exonic hg19 OV TCGA-13-0765-01A 20 10 CDS-5'UTR Intra-chr p12.1 p12.1 Seq+ 39833 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6A-LCMT1 TNRC6A chr16 24741621 + LCMT1 chr16 25139796 + Exonic hg19 OV TCGA-13-0765-01A 18 10 In-Frame Intra-chr p12.1 p12.1 Seq+ 39834 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-13-0765-01A 19 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 39835 ChimerSeq STARFusion TCGA_RNA-Seq DTX2-ZP3 DTX2 chr7 76093026 + ZP3 chr7 76069567 + Exonic hg19 OV TCGA-13-0765-01A 11 4 5'UTR-CDS Intra-chr q11.23 Seq+ 39836 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6A-LCMT1 TNRC6A chr16 24762134 + LCMT1 chr16 25137285 + Exonic hg19 OV TCGA-13-0765-01A 7 10 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 39837 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6A-LCMT1 TNRC6A chr16 24762134 + LCMT1 chr16 25139796 + Exonic hg19 OV TCGA-13-0765-01A 5 10 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 39838 ChimerSeq STARFusion TCGA_RNA-Seq COL14A1-DEPTOR COL14A1 chr8 121174808 + DEPTOR chr8 121061815 + Exonic hg19 OV TCGA-61-1724-01A 684 100 Out-of-frame Intra-chr q24.12 q24.12 Seq+ 39839 ChimerSeq STARFusion TCGA_RNA-Seq USP54-MYOZ1 USP54 chr10 75331179 - MYOZ1 chr10 75397680 - Exonic hg19 OV TCGA-61-1724-01A 228 24 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 39840 ChimerSeq STARFusion TCGA_RNA-Seq PPP3CC-SLC39A14 PPP3CC chr8 22333137 + SLC39A14 chr8 22262209 + Exonic hg19 OV TCGA-61-1724-01A 63 8 CDS-5'UTR Intra-chr p21.3 Tumor suppressor gene p21.3 Seq+ 39841 ChimerSeq STARFusion TCGA_RNA-Seq CCDC124-COL28A1 CCDC124 chr19 18047388 + COL28A1 chr7 7421243 - Exonic hg19 OV TCGA-61-1724-01A 56 7 In-Frame Inter-chr p13.11 p21.3 Seq+ 39842 ChimerSeq STARFusion TCGA_RNA-Seq DOCK1-NPS DOCK1 chr10 128780237 + NPS chr10 129350724 + Exonic hg19 OV TCGA-61-1724-01A 51 10 Out-of-frame Intra-chr q26.2 q26.2 Seq+ 39843 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L2-PDE11A NFE2L2 chr2 178129260 - PDE11A chr2 178705110 - Exonic hg19 OV TCGA-61-1724-01A 38 4 Out-of-frame Intra-chr q31.2 Oncogene Transcription factor q31.2 Seq+ 39844 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT4-CASC17 AGPAT4 chr6 161653068 - CASC17 chr17 69181796 - Exonic hg19 OV TCGA-61-1724-01A 28 3 Out-of-frame Inter-chr q26 q24.3 Seq+ 39845 ChimerSeq STARFusion TCGA_RNA-Seq RALGPS1-GAPVD1 RALGPS1 chr9 129831635 + GAPVD1 chr9 128109098 + Exonic hg19 OV TCGA-61-1724-01A 25 3 In-Frame Intra-chr q33.3 q33.3 Seq+ 39846 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L2-PDE11A NFE2L2 chr2 178128131 - PDE11A chr2 178705110 - Exonic hg19 OV TCGA-61-1724-01A 18 4 5'UTR-CDS Intra-chr q31.2 Oncogene Transcription factor q31.2 Seq+ 39847 ChimerSeq STARFusion TCGA_RNA-Seq LAMA3-ANO2 LAMA3 chr18 21294036 + ANO2 chr12 5641280 - Exonic hg19 OV TCGA-61-1724-01A 16 0 CDS-3'UTR Inter-chr q11.2 p13.31 Seq+ 39848 ChimerSeq STARFusion TCGA_RNA-Seq MYO9A-PARP6 MYO9A chr15 72196270 - PARP6 chr15 72535040 - Exonic hg19 OV TCGA-61-1724-01A 12 4 Out-of-frame Intra-chr q23 q23 Seq+ 39849 ChimerSeq STARFusion TCGA_RNA-Seq ITGA7-MIP ITGA7 chr12 56086628 - MIP chr12 56847539 - Exonic hg19 OV TCGA-61-1724-01A 12 0 In-Frame Intra-chr q13.2 Tumor suppressor gene q13.3 Seq+ 39850 ChimerSeq STARFusion TCGA_RNA-Seq CDK13-POU6F2 CDK13 chr7 40041630 + POU6F2 chr7 39500146 + Exonic hg19 OV TCGA-61-1724-01A 8 3 In-Frame Intra-chr p14.1 p14.1 Tumor suppressor gene Transcription factor Seq+ 39851 ChimerSeq STARFusion TCGA_RNA-Seq UBXN4-R3HDM1 UBXN4 chr2 136527393 + R3HDM1 chr2 136360070 + Exonic hg19 OV TCGA-61-1724-01A 7 4 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 39852 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-GLIS2 CREBBP chr16 3900298 - GLIS2 chr16 4382216 + Exonic hg19 OV TCGA-25-2399-01A 143 7 CDS-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Transcription factor 39853 ChimerSeq STARFusion TCGA_RNA-Seq ZNF826P-NUMBL ZNF826P chr19 20591750 - NUMBL chr19 41183326 - Exonic hg19 OV TCGA-25-2399-01A 125 10 3'UTR-CDS Intra-chr p12 q13.2 Seq+ 39854 ChimerSeq STARFusion TCGA_RNA-Seq ZNF826P-NUMBL ZNF826P chr19 20519759 - NUMBL chr19 41183326 - Exonic hg19 OV TCGA-25-2399-01A 46 4 3'UTR-CDS Intra-chr p12 q13.2 Seq+ 39855 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF18-INSR ARHGEF18 chr19 7460133 + INSR chr19 7267907 - Exonic hg19 OV TCGA-25-2399-01A 22 4 5'UTR-CDS Intra-chr p13.2 p13.2 TK:InsR Seq+ 39856 ChimerSeq STARFusion TCGA_RNA-Seq RIPK1-SERPINB9 RIPK1 chr6 3064293 + SERPINB9 chr6 2900855 - Exonic hg19 OV TCGA-25-2399-01A 11 0 5'UTR-5'UTR Intra-chr p25.2 TKL:RIPK p25.2 39857 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-24-1557-01A 53 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39858 ChimerSeq STARFusion TCGA_RNA-Seq EFCAB12-MBD4 EFCAB12 chr3 129134088 - MBD4 chr3 129152979 - Exonic hg19 OV TCGA-24-1557-01A 20 30 Out-of-frame Intra-chr q21.3 q21.3 Tumor suppressor gene Transcription factor 39859 ChimerSeq STARFusion TCGA_RNA-Seq ITGB4-SMIM6 ITGB4 chr17 73720862 + SMIM6 chr17 73642735 + Exonic hg19 OV TCGA-24-1557-01A 22 15 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 39860 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-24-1557-01A 19 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39861 ChimerSeq STARFusion TCGA_RNA-Seq NUBPL-DOCK2 NUBPL chr14 32142780 + DOCK2 chr5 169435501 + Exonic hg19 OV TCGA-24-1557-01A 14 16 In-Frame Inter-chr q12 q35.1 Seq+ 39862 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-24-1557-01A 14 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 39863 ChimerSeq STARFusion TCGA_RNA-Seq RLF-MFSD2A RLF chr1 40627308 + MFSD2A chr1 40422759 + Exonic hg19 OV TCGA-24-1557-01A 8 11 In-Frame Intra-chr p34.2 Transcription factor p34.2 Tumor suppressor gene Seq+ 39864 ChimerSeq STARFusion TCGA_RNA-Seq CSMD2-FYB CSMD2 chr1 34291298 - FYB chr5 39153706 - Exonic hg19 OV TCGA-24-1557-01A 7 13 In-Frame Inter-chr p35.1 p13.1 Seq+ 39865 ChimerSeq STARFusion TCGA_RNA-Seq NUDCD1-VWA8 NUDCD1 chr8 110283234 - VWA8 chr13 42189220 - Exonic hg19 OV TCGA-24-1557-01A 8 8 Out-of-frame Inter-chr q23.1 q14.11 Seq+ 39866 ChimerSeq STARFusion TCGA_RNA-Seq BTBD7-RGS9 BTBD7 chr14 93799166 - RGS9 chr17 63149540 + Exonic hg19 OV TCGA-24-1557-01A 8 1 5'UTR-CDS Inter-chr q24.1 Seq+ 39867 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-CPNE4 ZBTB20 chr3 114619151 - CPNE4 chr3 131624288 - Exonic hg19 OV TCGA-24-1557-01A 5 11 5'UTR-5'UTR Intra-chr q13.31 Transcription factor q22.1 Seq+ 39868 ChimerSeq STARFusion TCGA_RNA-Seq SMAP2-CAP1 SMAP2 chr1 40839895 + CAP1 chr1 40527407 + Exonic hg19 OV TCGA-24-1557-01A 6 4 Out-of-frame Intra-chr p34.2 p34.2 Seq+ 39869 ChimerSeq STARFusion TCGA_RNA-Seq GRB10-SCIN GRB10 chr7 50737419 - SCIN chr7 12662426 + Exonic hg19 OV TCGA-24-1557-01A 6 3 In-Frame Intra-chr p12.1 p21.3 Seq+ 39870 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R3E-MYH6 PPP1R3E chr14 23765965 - MYH6 chr14 23874031 - Exonic hg19 OV TCGA-24-1557-01A 6 3 3'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 39871 ChimerSeq STARFusion TCGA_RNA-Seq RLF-MFSD2A RLF chr1 40627308 + MFSD2A chr1 40424373 + Exonic hg19 OV TCGA-24-1557-01A 4 11 In-Frame Intra-chr p34.2 Transcription factor p34.2 Tumor suppressor gene Seq+ 39872 ChimerSeq STARFusion TCGA_RNA-Seq SPAG9-MBTD1 SPAG9 chr17 49156945 - MBTD1 chr17 49258055 - Exonic hg19 OV TCGA-24-1557-01A 3 9 In-Frame Intra-chr q21.33 q21.33 Seq+ 39873 ChimerSeq STARFusion TCGA_RNA-Seq STUB1-RHOT2 STUB1 chr16 731603 + RHOT2 chr16 722084 + Exonic hg19 OV TCGA-24-1557-01A 2 11 In-Frame Intra-chr p13.3 Tumor suppressor gene p13.3 Seq+ 39874 ChimerSeq STARFusion TCGA_RNA-Seq TPM3-FAM193A TPM3 chr1 154155464 - FAM193A chr4 2733502 + Exonic hg19 OV TCGA-13-1506-01A 161 49 Out-of-frame Inter-chr q21.3 p16.3 Seq+ 39875 ChimerSeq STARFusion TCGA_RNA-Seq PAIP1-DAB2 PAIP1 chr5 43555932 - DAB2 chr5 39375186 - Exonic hg19 OV TCGA-13-1506-01A 98 27 In-Frame Intra-chr p12 p13.1 Tumor suppressor gene Seq+ 39876 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-13-1506-01A 50 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39877 ChimerSeq STARFusion TCGA_RNA-Seq ZMYND8-EYA2 ZMYND8 chr20 45852970 - EYA2 chr20 45700824 + Exonic hg19 OV TCGA-13-1506-01A 36 25 In-Frame Intra-chr q13.12 q13.12 Seq+ 39878 ChimerSeq STARFusion TCGA_RNA-Seq FLOT2-MYO18A FLOT2 chr17 27224544 - MYO18A chr17 27422077 - Exonic hg19 OV TCGA-13-1506-01A 28 8 Out-of-frame Intra-chr q11.2 q11.2 Oncogene Seq+ 39879 ChimerSeq STARFusion TCGA_RNA-Seq TRIM2-ARFIP1 TRIM2 chr4 154125712 + ARFIP1 chr4 153831216 + Exonic hg19 OV TCGA-13-1506-01A 19 10 In-Frame Intra-chr q31.3 q31.3 Seq+ 39880 ChimerSeq STARFusion TCGA_RNA-Seq TUBB-MDC1 TUBB chr6 30690805 + MDC1 chr6 30685678 - Exonic hg19 OV TCGA-13-1506-01A 19 8 CDS-5'UTR Intra-chr Tumor suppressor gene Seq+ 39881 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-13-1506-01A 19 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 39882 ChimerSeq STARFusion TCGA_RNA-Seq CAPZB-TMCO4 CAPZB chr1 19811930 - TMCO4 chr1 20009937 - Exonic hg19 OV TCGA-13-1506-01A 16 9 In-Frame Intra-chr p36.13 p36.13 Seq+ 39883 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1A1-PDE6A CSNK1A1 chr5 148899853 - PDE6A chr5 149242829 - Exonic hg19 OV TCGA-13-1506-01A 15 6 In-Frame Intra-chr q32 Tumor suppressor gene q32 Seq+ 39884 ChimerSeq STARFusion TCGA_RNA-Seq ECE1-SLC48A1 ECE1 chr1 21616563 - SLC48A1 chr12 48165953 + Exonic hg19 OV TCGA-13-1506-01A 13 5 CDS-5'UTR Inter-chr p36.12 q13.11 Seq+ 39885 ChimerSeq STARFusion TCGA_RNA-Seq RBBP8-DST RBBP8 chr18 20596887 + DST chr6 56819448 - Exonic hg19 OV TCGA-13-1506-01A 9 3 CDS-5'UTR Inter-chr q11.2 Tumor suppressor gene p12.1 Oncogene 39886 ChimerSeq STARFusion TCGA_RNA-Seq GMEB1-EPB41 GMEB1 chr1 29030841 + EPB41 chr1 29379616 + Exonic hg19 OV TCGA-13-1506-01A 6 6 In-Frame Intra-chr p35.3 Transcription factor p35.3 Tumor suppressor gene 39887 ChimerSeq STARFusion TCGA_RNA-Seq ECE1-SLC48A1 ECE1 chr1 21616563 - SLC48A1 chr12 48172811 + Exonic hg19 OV TCGA-13-1506-01A 5 5 Out-of-frame Inter-chr p36.12 q13.11 Seq+ 39888 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-13-1506-01A 6 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39889 ChimerSeq STARFusion TCGA_RNA-Seq SSBP3-FAM151A SSBP3 chr1 54867534 - FAM151A chr1 55081845 - Exonic hg19 OV TCGA-13-1506-01A 5 4 Out-of-frame Intra-chr p32.3 p32.3 39890 ChimerSeq STARFusion TCGA_RNA-Seq XPR1-LHX4 XPR1 chr1 180651547 + LHX4 chr1 180217420 + Exonic hg19 OV TCGA-13-1506-01A 5 1 In-Frame Intra-chr q25.3 q25.2 Tumor suppressor gene Transcription factor Seq+ 39891 ChimerSeq STARFusion TCGA_RNA-Seq EPHB6-PRSS3P1 EPHB6 chr7 142564360 + PRSS3P1 chr7 142469324 + Exonic hg19 OV TCGA-13-1506-01A 4 2 Out-of-frame Intra-chr q34 Oncogene Tumor suppressor gene 39892 ChimerSeq STARFusion TCGA_RNA-Seq PARD3B-NRP2 PARD3B chr2 206110546 + NRP2 chr2 206562268 + Exonic hg19 OV TCGA-13-1506-01A 4 2 In-Frame Intra-chr q33.3 q33.3 39893 ChimerSeq STARFusion TCGA_RNA-Seq TMSB4X-CTSB TMSB4X chrX 12994451 + CTSB chr8 11702310 - Exonic hg19 OV TCGA-13-1506-01A 3 3 Out-of-frame Inter-chr p22.2 p23.1 39894 ChimerSeq STARFusion TCGA_RNA-Seq ECE1-SLC48A1 ECE1 chr1 21671869 - SLC48A1 chr12 48172811 + Exonic hg19 OV TCGA-13-1506-01A 2 5 Out-of-frame Inter-chr p36.12 q13.11 Seq+ 39895 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R13B-C14orf2 PPP1R13B chr14 104313636 - C14orf2 chr14 104381526 - Exonic hg19 OV TCGA-13-1506-01A 2 4 In-Frame Intra-chr q32.33 q32.33 Seq+ 39896 ChimerSeq STARFusion TCGA_RNA-Seq ITCH-CBFA2T2 ITCH chr20 32981687 + CBFA2T2 chr20 32232153 + Exonic hg19 OV TCGA-20-1684-01A 70 38 Out-of-frame Intra-chr q11.22 q11.21 Seq+ 39897 ChimerSeq STARFusion TCGA_RNA-Seq UBE2G1-PELP1 UBE2G1 chr17 4269566 - PELP1 chr17 4580107 - Exonic hg19 OV TCGA-20-1684-01A 61 42 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 39898 ChimerSeq STARFusion TCGA_RNA-Seq C9orf3-HIATL1 C9orf3 chr9 97845001 + HIATL1 chr9 97191471 + Exonic hg19 OV TCGA-20-1684-01A 56 33 3'UTR-CDS Intra-chr q22.32 Seq+ 39899 ChimerSeq STARFusion TCGA_RNA-Seq ERGIC1-KCNIP1 ERGIC1 chr5 172261436 + KCNIP1 chr5 170145762 + Exonic hg19 OV TCGA-20-1684-01A 42 61 Out-of-frame Intra-chr q35.1 q35.1 Seq+ 39900 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-PVALB MYH9 chr22 36783852 - PVALB chr22 37213056 - Exonic hg19 OV TCGA-20-1684-01A 48 18 5'UTR-5'UTR Intra-chr q12.3 Oncogene Tumor suppressor gene Seq+ 39901 ChimerSeq STARFusion TCGA_RNA-Seq GLG1-CFDP1 GLG1 chr16 74501654 - CFDP1 chr16 75339080 - Exonic hg19 OV TCGA-20-1684-01A 43 22 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 39902 ChimerSeq STARFusion TCGA_RNA-Seq CACNA2D3-DAP3 CACNA2D3 chr3 54676268 + DAP3 chr1 155707948 + Exonic hg19 OV TCGA-20-1684-01A 31 15 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q22 Seq+ 39903 ChimerSeq STARFusion TCGA_RNA-Seq C9orf3-HIATL1 C9orf3 chr9 97843062 + HIATL1 chr9 97191471 + Exonic hg19 OV TCGA-20-1684-01A 18 33 In-Frame Intra-chr q22.32 Seq+ 39904 ChimerSeq STARFusion TCGA_RNA-Seq ZNF276-JPH3 ZNF276 chr16 89790117 + JPH3 chr16 87730186 + Exonic hg19 OV TCGA-20-1684-01A 18 14 Out-of-frame Intra-chr q24.3 Transcription factor q24.2 Seq+ 39905 ChimerSeq STARFusion TCGA_RNA-Seq PSMF1-ABRA PSMF1 chr20 1099545 + ABRA chr8 107773742 - Exonic hg19 OV TCGA-20-1684-01A 15 11 Out-of-frame Inter-chr p13 q23.1 Seq+ 39906 ChimerSeq STARFusion TCGA_RNA-Seq FOXJ3-LRRC41 FOXJ3 chr1 42693554 - LRRC41 chr1 46764042 - Exonic hg19 OV TCGA-20-1684-01A 13 5 Out-of-frame Intra-chr p34.2 Transcription factor p33 Seq+ 39907 ChimerSeq STARFusion TCGA_RNA-Seq AKAP13-ABHD17C AKAP13 chr15 86028984 + ABHD17C chr15 81041854 + Exonic hg19 OV TCGA-20-1684-01A 12 7 Out-of-frame Intra-chr q25.3 q25.1 39908 ChimerSeq STARFusion TCGA_RNA-Seq DYNC2H1-YAP1 DYNC2H1 chr11 103153814 + YAP1 chr11 102033187 + Exonic hg19 OV TCGA-20-1684-01A 11 10 Out-of-frame Intra-chr q22.3 q22.1 Tumor suppressor gene Seq+ 39909 ChimerSeq STARFusion TCGA_RNA-Seq JMJD1C-CTNNA3 JMJD1C chr10 65140078 - CTNNA3 chr10 68535282 - Exonic hg19 OV TCGA-20-1684-01A 11 5 In-Frame Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 39910 ChimerSeq STARFusion TCGA_RNA-Seq NRG4-LINGO1 NRG4 chr15 76301541 - LINGO1 chr15 78088395 - Exonic hg19 OV TCGA-20-1684-01A 10 7 CDS-5'UTR Intra-chr q24.2 q24.3 Seq+ 39911 ChimerSeq STARFusion TCGA_RNA-Seq ATG4C-NFIA ATG4C chr1 63270926 + NFIA chr1 61798184 + Exonic hg19 OV TCGA-20-1684-01A 10 6 In-Frame Intra-chr p31.3 p31.3 Transcription factor Seq+ 39912 ChimerSeq STARFusion TCGA_RNA-Seq CHIC2-SPINK2 CHIC2 chr4 54915122 - SPINK2 chr4 57686745 - Exonic hg19 OV TCGA-20-1684-01A 8 12 Out-of-frame Intra-chr q12 q12 Seq+ 39913 ChimerSeq STARFusion TCGA_RNA-Seq CACNA2D3-DAP3 CACNA2D3 chr3 54676268 + DAP3 chr1 155706737 + Exonic hg19 OV TCGA-20-1684-01A 6 14 In-Frame Inter-chr p21.1 Tumor suppressor gene q22 Seq+ 39914 ChimerSeq STARFusion TCGA_RNA-Seq CBLB-LINC00882 CBLB chr3 105495240 - LINC00882 chr3 106848839 - Exonic hg19 OV TCGA-20-1684-01A 5 11 Out-of-frame Intra-chr q13.11 q13.12 39915 ChimerSeq STARFusion TCGA_RNA-Seq CHIC2-SPINK2 CHIC2 chr4 54915122 - SPINK2 chr4 57677960 - Exonic hg19 OV TCGA-20-1684-01A 3 12 In-Frame Intra-chr q12 q12 Seq+ 39916 ChimerSeq STARFusion TCGA_RNA-Seq FAM171A1-DCLRE1CP1 FAM171A1 chr10 15412955 - DCLRE1CP1 chr10 15063862 - Exonic hg19 OV TCGA-24-1430-01A 43 18 Out-of-frame Intra-chr p13 p13 Seq+ 39917 ChimerSeq STARFusion TCGA_RNA-Seq ZNF292-SLIRP ZNF292 chr6 87865477 + SLIRP chr14 78177181 + Exonic hg19 OV TCGA-24-1430-01A 29 6 Out-of-frame Inter-chr q14.3 Tumor suppressor gene Transcription factor q24.3 Seq+ 39918 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-1430-01A 26 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39919 ChimerSeq STARFusion TCGA_RNA-Seq OXR1-CLEC18C OXR1 chr8 107531367 + CLEC18C chr16 70211144 + Exonic hg19 OV TCGA-24-1430-01A 11 10 Out-of-frame Inter-chr q23.1 q22.1 Seq+ 39920 ChimerSeq STARFusion TCGA_RNA-Seq OXR1-CLEC18C OXR1 chr8 107531367 + CLEC18C chr16 70215753 + Exonic hg19 OV TCGA-24-1430-01A 10 9 Out-of-frame Inter-chr q23.1 q22.1 Seq+ 39921 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069803 - Exonic hg19 OV TCGA-24-1430-01A 10 0 Out-of-frame Inter-chr q12.3 q32.2 39922 ChimerSeq STARFusion TCGA_RNA-Seq AJUBA-SLC7A8 AJUBA chr14 23443256 - SLC7A8 chr14 23652164 - Exonic hg19 OV TCGA-24-1430-01A 6 4 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 39923 ChimerSeq STARFusion TCGA_RNA-Seq AJUBA-SLC7A8 AJUBA chr14 23443256 - SLC7A8 chr14 23652247 - Exonic hg19 OV TCGA-24-1430-01A 6 4 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 39924 ChimerSeq STARFusion TCGA_RNA-Seq CUL7-USP10 CUL7 chr6 43013724 - USP10 chr16 84808766 + Exonic hg19 OV TCGA-24-1430-01A 4 9 Out-of-frame Inter-chr p21.1 q24.1 Seq+ 39925 ChimerSeq STARFusion TCGA_RNA-Seq FGFRL1-IGF2 FGFRL1 chr4 1020073 + IGF2 chr11 2153027 - Exonic hg19 OV TCGA-24-1430-01A 3 12 Out-of-frame Inter-chr p16.3 p15.5 Oncogene 39926 ChimerSeq STARFusion TCGA_RNA-Seq CHP1-RAD51B CHP1 chr15 41549188 + RAD51B chr14 68758601 + Exonic hg19 OV TCGA-24-2027-01A 24 6 Out-of-frame Inter-chr q15.1 q24.1 Seq+ 39927 ChimerSeq STARFusion TCGA_RNA-Seq NSUN6-ARMS2 NSUN6 chr10 18940058 - ARMS2 chr10 124216423 + Exonic hg19 OV TCGA-24-2027-01A 19 0 In-Frame Intra-chr p12.31 q26.13 Seq+ 39928 ChimerSeq STARFusion TCGA_RNA-Seq INSR-ERCC1 INSR chr19 7293803 - ERCC1 chr19 45926639 - Exonic hg19 OV TCGA-24-2027-01A 17 6 CDS-5'UTR Intra-chr p13.2 TK:InsR q13.32 Oncogene Seq+ 39929 ChimerSeq STARFusion TCGA_RNA-Seq SRPK2-LINC01004 SRPK2 chr7 105029095 - LINC01004 chr7 104623138 - Exonic hg19 OV TCGA-24-2027-01A 16 2 Out-of-frame Intra-chr q22.3 CMGC:SRPK q22.3 39930 ChimerSeq STARFusion TCGA_RNA-Seq MEA1-THSD4 MEA1 chr6 42980664 - THSD4 chr15 71704026 + Exonic hg19 OV TCGA-24-2027-01A 14 1 In-Frame Inter-chr p21.1 q23 Seq+ 39931 ChimerSeq STARFusion TCGA_RNA-Seq NTN1-PKD2L2 NTN1 chr17 9086286 + PKD2L2 chr5 137278073 + Exonic hg19 OV TCGA-24-2027-01A 10 3 CDS-3'UTR Inter-chr p13.1 q31.2 Seq+ 39932 ChimerSeq STARFusion TCGA_RNA-Seq NTN1-PKD2L2 NTN1 chr17 9086286 + PKD2L2 chr5 137275779 + Exonic hg19 OV TCGA-24-2027-01A 7 3 Out-of-frame Inter-chr p13.1 q31.2 Seq+ 39933 ChimerSeq STARFusion TCGA_RNA-Seq NCOA3-PARD3B NCOA3 chr20 46212005 + PARD3B chr2 205829875 + Exonic hg19 OV TCGA-24-2027-01A 6 4 5'UTR-CDS Inter-chr q13.12 Transcription factor q33.3 Seq+ 39934 ChimerSeq STARFusion TCGA_RNA-Seq INSR-ERCC1 INSR chr19 7293803 - ERCC1 chr19 45924651 - Exonic hg19 OV TCGA-24-2027-01A 5 6 Out-of-frame Intra-chr p13.2 TK:InsR q13.32 Oncogene Seq+ 39935 ChimerSeq STARFusion TCGA_RNA-Seq NMRAL1-PRKCB NMRAL1 chr16 4516154 - PRKCB chr16 24231282 + Exonic hg19 OV TCGA-61-1907-01A 22 6 Out-of-frame Intra-chr p13.3 p12.2 Tumor suppressor gene Seq+ 39936 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106209411 - Exonic hg19 OV TCGA-61-1907-01A 14 0 Out-of-frame Inter-chr q21.2 32.33 39937 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076851 + IGHG1 chr14 106209411 - Exonic hg19 OV TCGA-61-1907-01A 14 0 Out-of-frame Inter-chr q21.2 q32.33 39938 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-61-1907-01A 13 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39939 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106111130 - Exonic hg19 OV TCGA-61-1907-01A 11 0 Out-of-frame Inter-chr q21.2 32.33 39940 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-61-1907-01A 10 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39941 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106237746 - Exonic hg19 OV TCGA-61-1907-01A 9 0 Out-of-frame Inter-chr q21.2 32.33 39942 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076852 + IGH@ chr14 106209410 - Exonic hg19 OV TCGA-29-1710-01A 106 0 Out-of-frame Inter-chr q21.2 32.33 39943 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076852 + IGHG1 chr14 106209410 - Exonic hg19 OV TCGA-29-1710-01A 106 0 Out-of-frame Inter-chr q21.2 q32.33 39944 ChimerSeq STARFusion TCGA_RNA-Seq RFX1-CEACAMP3 RFX1 chr19 14083555 - CEACAMP3 chr19 42111196 + Exonic hg19 OV TCGA-29-1710-01A 54 8 Out-of-frame Intra-chr p13.12 Transcription factor Seq+ 39945 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-29-1710-01A 43 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39946 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076852 + IGH@ chr14 106111129 - Exonic hg19 OV TCGA-29-1710-01A 42 0 Out-of-frame Inter-chr q21.2 32.33 39947 ChimerSeq STARFusion TCGA_RNA-Seq ZFP28-SLC35E1 ZFP28 chr19 57051085 + SLC35E1 chr19 16678980 - Exonic hg19 OV TCGA-29-1710-01A 36 3 In-Frame Intra-chr q13.43 Transcription factor p13.11 Seq+ 39948 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-29-1710-01A 33 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 39949 ChimerSeq STARFusion TCGA_RNA-Seq FAM157A-TM4SF4 FAM157A chr3 197884540 + TM4SF4 chr3 149216509 + Exonic hg19 OV TCGA-29-1710-01A 31 5 Out-of-frame Intra-chr q29 q25.1 39950 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076857 + IGH@ chr14 106237740 - Exonic hg19 OV TCGA-29-1710-01A 27 0 Out-of-frame Inter-chr q21.2 32.33 39951 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106237746 - Exonic hg19 OV TCGA-29-1710-01A 19 0 Out-of-frame Inter-chr q21.2 32.33 39952 ChimerSeq STARFusion TCGA_RNA-Seq UBE2G1-PELP1 UBE2G1 chr17 4269566 - PELP1 chr17 4586247 - Exonic hg19 OV TCGA-29-1710-01A 14 4 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 39953 ChimerSeq STARFusion TCGA_RNA-Seq KLHL14-CCDC178 KLHL14 chr18 30321891 - CCDC178 chr18 30554645 - Exonic hg19 OV TCGA-29-1710-01A 14 2 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 39954 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF28-BTF3 ARHGEF28 chr5 72980709 + BTF3 chr5 72798313 + Exonic hg19 OV TCGA-29-1710-01A 11 1 Out-of-frame Intra-chr q13.2 q13.2 39955 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-29-1710-01A 11 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39956 ChimerSeq STARFusion TCGA_RNA-Seq KANSL3-ANKRD36 KANSL3 chr2 97297049 - ANKRD36 chr2 97930066 + Exonic hg19 OV TCGA-36-1575-01A 59 20 3'UTR-3'UTR Intra-chr q11.2 q11.2 Seq+ 39957 ChimerSeq STARFusion TCGA_RNA-Seq BUB1B-EIF2AK4 BUB1B chr15 40462882 + EIF2AK4 chr15 40284376 + Exonic hg19 OV TCGA-36-1575-01A 40 5 In-Frame Intra-chr q15.1 Oncogene q15.1 Seq+ 39958 ChimerSeq STARFusion TCGA_RNA-Seq FAM129B-PTGES FAM129B chr9 130331099 - PTGES chr9 132515344 - Exonic hg19 OV TCGA-36-1575-01A 35 6 CDS-5'UTR Intra-chr q34.11 q34.11 Seq+ 39959 ChimerSeq STARFusion TCGA_RNA-Seq NR2F6-BABAM1 NR2F6 chr19 17355752 - BABAM1 chr19 17378211 + Exonic hg19 OV TCGA-36-1575-01A 29 9 CDS-5'UTR Intra-chr p13.11 Transcription factor p13.11 39960 ChimerSeq STARFusion TCGA_RNA-Seq ZNF254-TPM4 ZNF254 chr19 24229081 + TPM4 chr19 16212074 + Exonic hg19 OV TCGA-36-1575-01A 22 12 5'UTR-CDS Intra-chr p12 Transcription factor p13.12 39961 ChimerSeq STARFusion TCGA_RNA-Seq CDC25A-PRKAR2A CDC25A chr3 48215774 - PRKAR2A chr3 48820525 - Exonic hg19 OV TCGA-36-1575-01A 18 7 In-Frame Intra-chr p21.31 p21.31 Seq+ 39962 ChimerSeq STARFusion TCGA_RNA-Seq MTMR3-ZNRF3 MTMR3 chr22 30279348 + ZNRF3 chr22 29383064 + Exonic hg19 OV TCGA-36-1575-01A 16 2 5'UTR-5'UTR Intra-chr q12.2 q12.1 Seq+ 39963 ChimerSeq STARFusion TCGA_RNA-Seq ZNF254-TPM4 ZNF254 chr19 24232350 + TPM4 chr19 16212074 + Exonic hg19 OV TCGA-36-1575-01A 10 12 5'UTR-CDS Intra-chr p12 Transcription factor p13.12 39964 ChimerSeq STARFusion TCGA_RNA-Seq FAM122B-PHYKPL FAM122B chrX 133923253 - PHYKPL chr5 177641886 - Exonic hg19 OV TCGA-13-0766-01A 15 2 Out-of-frame Inter-chr q26.3 q35.3 Seq+ 39965 ChimerSeq STARFusion TCGA_RNA-Seq DYNLRB1-ITCH DYNLRB1 chr20 33122599 + ITCH chr20 33092136 + Exonic hg19 OV TCGA-13-0766-01A 13 5 In-Frame Intra-chr q11.22 q11.22 Seq+ 39966 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF1-CD79A ARHGEF1 chr19 42387356 + CD79A chr19 42383060 + Exonic hg19 OV TCGA-13-0766-01A 3 21 5'UTR-CDS Intra-chr q13.2 q13.2 Oncogene Seq+ 39967 ChimerSeq STARFusion TCGA_RNA-Seq USP46-SCFD2 USP46 chr4 53525282 - SCFD2 chr4 53787037 - Exonic hg19 OV TCGA-13-0766-01A 4 1 Out-of-frame Intra-chr q12 q12 Seq+ 39968 ChimerSeq STARFusion TCGA_RNA-Seq DPM1-CYP4F12 DPM1 chr20 49571723 - CYP4F12 chr19 15807240 + Exonic hg19 OV TCGA-13-0923-01A 209 63 In-Frame Inter-chr q13.13 p13.12 Seq+ 39969 ChimerSeq STARFusion TCGA_RNA-Seq IP6K2-PRKAR2A IP6K2 chr3 48754590 - PRKAR2A chr3 48802782 - Exonic hg19 OV TCGA-13-0923-01A 20 0 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 39970 ChimerSeq STARFusion TCGA_RNA-Seq SNX8-MAD1L1 SNX8 chr7 2353963 - MAD1L1 chr7 2108973 - Exonic hg19 OV TCGA-13-0923-01A 12 10 Out-of-frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 39971 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821632 - Exonic hg19 OV TCGA-13-0923-01A 7 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39972 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469662 + FTH1P27 chrX 37364954 + Exonic hg19 OV TCGA-13-0923-01A 7 0 Out-of-frame Inter-chr q13.33 p21.1 39973 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A2-BAZ2B SLC7A2 chr8 17402115 + BAZ2B chr2 160412376 - Exonic hg19 OV TCGA-13-0923-01A 7 0 CDS-5'UTR Inter-chr p22 q24.2 Transcription factor Seq+ 39974 ChimerSeq STARFusion TCGA_RNA-Seq RASA2-SUCNR1 RASA2 chr3 141235273 + SUCNR1 chr3 151597640 + Exonic hg19 OV TCGA-09-1669-01A 57 24 CDS-5'UTR Intra-chr q23 q25.1 Seq+ 39975 ChimerSeq STARFusion TCGA_RNA-Seq FAM83G-IGL@ FAM83G chr17 18881401 - IGL@ chr22 23241805 + Exonic hg19 OV TCGA-09-1669-01A 12 0 Out-of-frame Inter-chr p11.2 q11.22 39976 ChimerSeq STARFusion TCGA_RNA-Seq FAM83G-IGLC2 FAM83G chr17 18881401 - IGLC2 chr22 23241805 + Exonic hg19 OV TCGA-09-1669-01A 12 0 Out-of-frame Inter-chr p11.2 q11.22 39977 ChimerSeq STARFusion TCGA_RNA-Seq FAM83G-IGLJ2 FAM83G chr17 18881401 - IGLJ2 chr22 23241805 + Exonic hg19 OV TCGA-09-1669-01A 12 0 Out-of-frame Inter-chr p11.2 q11.22 39978 ChimerSeq STARFusion TCGA_RNA-Seq ARID1B-ANKRD20A3 ARID1B chr6 157150555 + ANKRD20A3 chr9 43082885 - Exonic hg19 OV TCGA-09-1669-01A 8 4 CDS-5'UTR Inter-chr q25.3 Oncogene q21.11 39979 ChimerSeq STARFusion TCGA_RNA-Seq PAK1-KCTD21 PAK1 chr11 77066713 - KCTD21 chr11 77885629 - Exonic hg19 OV TCGA-09-1669-01A 6 5 CDS-5'UTR Intra-chr q14.1 STE:STE20 q14.1 Seq+ 39980 ChimerSeq STARFusion TCGA_RNA-Seq PAK1-KCTD21 PAK1 chr11 77064581 - KCTD21 chr11 77885629 - Exonic hg19 OV TCGA-09-1669-01A 4 5 CDS-5'UTR Intra-chr q14.1 STE:STE20 q14.1 Seq+ 39981 ChimerSeq STARFusion TCGA_RNA-Seq PAK1-KCTD21 PAK1 chr11 77069943 - KCTD21 chr11 77885629 - Exonic hg19 OV TCGA-09-1669-01A 4 5 CDS-5'UTR Intra-chr q14.1 STE:STE20 q14.1 Seq+ 39982 ChimerSeq STARFusion TCGA_RNA-Seq PVRL2-BCAM PVRL2 chr19 45349870 + BCAM chr19 45314482 + Exonic hg19 OV TCGA-23-1028-01A 29 8 In-Frame Intra-chr q13.32 39983 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1109-FSIP2 KIAA1109 chr4 123210347 + FSIP2 chr2 186692883 + Exonic hg19 OV TCGA-23-1028-01A 29 6 In-Frame Inter-chr q27 q32.1 Seq+ 39984 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-23-1028-01A 21 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39985 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1109-FSIP2 KIAA1109 chr4 123210347 + FSIP2 chr2 186689161 + Exonic hg19 OV TCGA-23-1028-01A 18 6 Out-of-frame Inter-chr q27 q32.1 Seq+ 39986 ChimerSeq STARFusion TCGA_RNA-Seq CHST11-HSP90B1 CHST11 chr12 104995769 + HSP90B1 chr12 104333287 + Exonic hg19 OV TCGA-23-1028-01A 14 6 In-Frame Intra-chr q23.3 q23.3 Tumor suppressor gene Seq+ 39987 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-23-1028-01A 15 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 39988 ChimerSeq STARFusion TCGA_RNA-Seq UHRF1BP1-SNRPC UHRF1BP1 chr6 34760071 + SNRPC chr6 34735685 + Exonic hg19 OV TCGA-23-1028-01A 10 3 Out-of-frame Intra-chr p21.31 p21.31 39989 ChimerSeq STARFusion TCGA_RNA-Seq MTCH2-FHIT MTCH2 chr11 47660251 - FHIT chr3 59738047 - Exonic hg19 OV TCGA-23-2077-01A 458 65 In-Frame Inter-chr p11.2 p14.2 Tumor suppressor gene Seq+ 39990 ChimerSeq STARFusion TCGA_RNA-Seq USP9X-DDX3X USP9X chrX 40945362 + DDX3X chrX 41223527 + Exonic hg19 OV TCGA-23-2077-01A 105 6 5'UTR-3'UTR Intra-chr p11.4 Oncogene p11.4 Tumor suppressor gene KB Pub Seq+ 39991 ChimerSeq STARFusion TCGA_RNA-Seq FAM160A2-APBB1 FAM160A2 chr11 6255774 - APBB1 chr11 6432591 - Exonic hg19 OV TCGA-23-2077-01A 43 34 5'UTR-5'UTR Intra-chr p15.4 p15.4 Seq+ 39992 ChimerSeq STARFusion TCGA_RNA-Seq HMG20B-KLK12 HMG20B chr19 3575658 + KLK12 chr19 51534177 - Exonic hg19 OV TCGA-23-2077-01A 32 0 In-Frame Intra-chr p13.3 Transcription factor q13.41 39993 ChimerSeq STARFusion TCGA_RNA-Seq E2F3-WRNIP1 E2F3 chr6 20404063 + WRNIP1 chr6 2779497 + Exonic hg19 OV TCGA-23-2077-01A 25 2 Out-of-frame Intra-chr p22.3 Tumor suppressor gene Transcription factor p25.2 Seq+ 39994 ChimerSeq STARFusion TCGA_RNA-Seq NR2F6-ABHD8 NR2F6 chr19 17355752 - ABHD8 chr19 17412433 - Exonic hg19 OV TCGA-23-2077-01A 22 5 CDS-5'UTR Intra-chr p13.11 Transcription factor p13.11 Seq+ 39995 ChimerSeq STARFusion TCGA_RNA-Seq USP9X-DDX3X USP9X chrX 40945362 + DDX3X chrX 41217086 + Exonic hg19 OV TCGA-23-2077-01A 18 6 5'UTR-3'UTR Intra-chr p11.4 Oncogene p11.4 Tumor suppressor gene KB Pub Seq+ 39996 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-23-2077-01A 19 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 39997 ChimerSeq STARFusion TCGA_RNA-Seq PJA2-KCNN2 PJA2 chr5 108745543 - KCNN2 chr5 113798746 + Exonic hg19 OV TCGA-23-2077-01A 11 0 5'UTR-5'UTR Intra-chr q21.3 q22.3 39998 ChimerSeq STARFusion TCGA_RNA-Seq ANO2-DCP1B ANO2 chr12 5936935 - DCP1B chr12 2077076 - Exonic hg19 OV TCGA-23-2077-01A 9 0 In-Frame Intra-chr p13.31 p13.33 Seq+ 39999 ChimerSeq STARFusion TCGA_RNA-Seq MKRN1-MRPS33 MKRN1 chr7 140178960 - MRPS33 chr7 140710460 - Exonic hg19 OV TCGA-36-1577-01A 212 121 CDS-5'UTR Intra-chr q34 q34 Seq+ 40000 ChimerSeq STARFusion TCGA_RNA-Seq NFIX-CALR NFIX chr19 13192669 + CALR chr19 13054351 + Exonic hg19 OV TCGA-36-1577-01A 128 82 In-Frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 40001 ChimerSeq STARFusion TCGA_RNA-Seq MKRN1-MRPS33 MKRN1 chr7 140178960 - MRPS33 chr7 140706335 - Exonic hg19 OV TCGA-36-1577-01A 113 119 In-Frame Intra-chr q34 q34 Seq+ 40002 ChimerSeq STARFusion TCGA_RNA-Seq MKRN1-MRPS33 MKRN1 chr7 140178960 - MRPS33 chr7 140710417 - Exonic hg19 OV TCGA-36-1577-01A 65 119 Out-of-frame Intra-chr q34 q34 Seq+ 40003 ChimerSeq STARFusion TCGA_RNA-Seq THRAP3-TEKT2 THRAP3 chr1 36762371 + TEKT2 chr1 36550471 + Exonic hg19 OV TCGA-36-1577-01A 34 13 CDS-5'UTR Intra-chr p34.3 p34.3 Seq+ 40004 ChimerSeq STARFusion TCGA_RNA-Seq OPN3-RGS7 OPN3 chr1 241803184 - RGS7 chr1 241262062 - Exonic hg19 OV TCGA-36-1577-01A 33 11 Out-of-frame Intra-chr q43 q43 Seq+ 40005 ChimerSeq STARFusion TCGA_RNA-Seq FYTTD1-DDOST FYTTD1 chr3 197483428 + DDOST chr1 20982680 - Exonic hg19 OV TCGA-36-1577-01A 29 11 In-Frame Inter-chr q29 p36.12 Seq+ 40006 ChimerSeq STARFusion TCGA_RNA-Seq KIF27-C9orf64 KIF27 chr9 86523367 - C9orf64 chr9 86570555 - Exonic hg19 OV TCGA-36-1577-01A 18 3 In-Frame Intra-chr q21.32 q21.32 Seq+ 40007 ChimerSeq STARFusion TCGA_RNA-Seq TTC28-UBE2L3 TTC28 chr22 29025540 - UBE2L3 chr22 21947150 + Exonic hg19 OV TCGA-36-1577-01A 15 11 In-Frame Intra-chr q12.1 q11.21 Seq+ 40008 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069803 - Exonic hg19 OV TCGA-36-1577-01A 13 0 Out-of-frame Inter-chr q12.3 q32.2 40009 ChimerSeq STARFusion TCGA_RNA-Seq TMEM63B-ACTL10 TMEM63B chr6 44108835 + ACTL10 chr20 32255514 + Exonic hg19 OV TCGA-36-1577-01A 10 12 In-Frame Inter-chr p21.1 q11.22 Seq+ 40010 ChimerSeq STARFusion TCGA_RNA-Seq LPP-DDX51 LPP chr3 188478070 + DDX51 chr12 132627423 - Exonic hg19 OV TCGA-36-1577-01A 11 5 In-Frame Inter-chr q27.3 Oncogene q24.33 Seq+ 40011 ChimerSeq STARFusion TCGA_RNA-Seq SPIDR-DSCAM SPIDR chr8 48206619 + DSCAM chr21 41559914 - Exonic hg19 OV TCGA-36-1577-01A 9 6 Out-of-frame Inter-chr q11.21 q22.2 Seq+ 40012 ChimerSeq STARFusion TCGA_RNA-Seq APBB3-TMEM163 APBB3 chr5 139973238 - TMEM163 chr2 135309662 - Exonic hg19 OV TCGA-36-1577-01A 7 7 5'UTR-CDS Inter-chr q31.3 q21.3 40013 ChimerSeq STARFusion TCGA_RNA-Seq FYTTD1-DDOST FYTTD1 chr3 197490509 + DDOST chr1 20982680 - Exonic hg19 OV TCGA-36-1577-01A 4 11 5'UTR-CDS Inter-chr q29 p36.12 Seq+ 40014 ChimerSeq STARFusion TCGA_RNA-Seq TTC28-UBE2L3 TTC28 chr22 28838874 - UBE2L3 chr22 21947150 + Exonic hg19 OV TCGA-36-1577-01A 2 11 CDS-5'UTR Intra-chr q12.1 q11.21 Seq+ 40015 ChimerSeq STARFusion TCGA_RNA-Seq PSMB2-C1orf94 PSMB2 chr1 36096875 - C1orf94 chr1 34673758 + Exonic hg19 OV TCGA-59-2355-01A 581 64 In-Frame Intra-chr p34.3 p35.1 Seq+ 40016 ChimerSeq STARFusion TCGA_RNA-Seq FBXO34-LGALS3 FBXO34 chr14 55738255 + LGALS3 chr14 55604088 + Exonic hg19 OV TCGA-59-2355-01A 223 68 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 40017 ChimerSeq STARFusion TCGA_RNA-Seq PSMB2-C1orf94 PSMB2 chr1 36096875 - C1orf94 chr1 34677811 + Exonic hg19 OV TCGA-59-2355-01A 117 61 In-Frame Intra-chr p34.3 p35.1 Seq+ 40018 ChimerSeq STARFusion TCGA_RNA-Seq FAM168A-RAB6A FAM168A chr11 73308968 - RAB6A chr11 73441868 - Exonic hg19 OV TCGA-59-2355-01A 12 0 5'UTR-5'UTR Intra-chr q13.4 q13.4 Seq+ 40019 ChimerSeq STARFusion TCGA_RNA-Seq SNTB2-TANGO6 SNTB2 chr16 69294163 + TANGO6 chr16 69074211 + Exonic hg19 OV TCGA-59-2355-01A 9 1 Out-of-frame Intra-chr q22.1 40020 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-SUPT5H ACTN4 chr19 39138547 + SUPT5H chr19 39943996 + Exonic hg19 OV TCGA-25-1321-01A 142 61 In-Frame Intra-chr q13.2 Seq+ 40021 ChimerSeq STARFusion TCGA_RNA-Seq EXOC4-LRGUK EXOC4 chr7 133502297 + LRGUK chr7 133932308 + Exonic hg19 OV TCGA-25-1321-01A 57 43 In-Frame Intra-chr q33 q33 40022 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-25-1321-01A 43 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40023 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-25-1321-01A 35 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40024 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-25-1321-01A 31 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40025 ChimerSeq STARFusion TCGA_RNA-Seq TP53I11-TYRL TP53I11 chr11 44972228 - TYRL chr11 49437306 - Exonic hg19 OV TCGA-25-1321-01A 15 4 Out-of-frame Intra-chr p11.2 p11.12 40026 ChimerSeq STARFusion TCGA_RNA-Seq ZNF132-RELB ZNF132 chr19 58951126 - RELB chr19 45532146 + Exonic hg19 OV TCGA-25-1317-01A 11 1 Out-of-frame Intra-chr q13.43 Transcription factor q13.32 Transcription factor 40027 ChimerSeq STARFusion TCGA_RNA-Seq PIGS-SPAG5 PIGS chr17 26887067 - SPAG5 chr17 26913517 - Exonic hg19 OV TCGA-24-1847-01A 48 12 In-Frame Intra-chr q11.2 q11.2 Seq+ 40028 ChimerSeq STARFusion TCGA_RNA-Seq PHF12-TIAF1 PHF12 chr17 27248706 - TIAF1 chr17 27401932 - Exonic hg19 OV TCGA-24-1847-01A 33 20 CDS-5'UTR Intra-chr q11.2 q11.2 Oncogene Seq+ 40029 ChimerSeq STARFusion TCGA_RNA-Seq PHF12-MYO18A PHF12 chr17 27248706 - MYO18A chr17 27401932 - Exonic hg19 OV TCGA-24-1847-01A 33 19 In-Frame Intra-chr q11.2 q11.2 Oncogene Seq+ 40030 ChimerSeq STARFusion TCGA_RNA-Seq CHD7-RAB2A CHD7 chr8 61591641 + RAB2A chr8 61471411 + Exonic hg19 OV TCGA-24-1847-01A 29 9 5'UTR-CDS Intra-chr q12.2 q12.1 Seq+ 40031 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-1847-01A 22 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40032 ChimerSeq STARFusion TCGA_RNA-Seq IMPDH2-QRICH1 IMPDH2 chr3 49065143 - QRICH1 chr3 49070661 - Exonic hg19 OV TCGA-24-1847-01A 11 6 Out-of-frame Intra-chr p21.31 p21.31 40033 ChimerSeq STARFusion TCGA_RNA-Seq PRKAR1B-GNA12 PRKAR1B chr7 645830 - GNA12 chr7 2773135 - Exonic hg19 OV TCGA-24-1847-01A 8 3 In-Frame Intra-chr p22.3 p22.2 Seq+ 40034 ChimerSeq STARFusion TCGA_RNA-Seq TDG-NRXN3 TDG chr12 104359838 + NRXN3 chr14 78708734 + Exonic hg19 OV TCGA-24-1847-01A 7 3 CDS-5'UTR Inter-chr q23.3 q24.3 40035 ChimerSeq STARFusion TCGA_RNA-Seq CHD7-RAB2A CHD7 chr8 61592350 + RAB2A chr8 61471411 + Exonic hg19 OV TCGA-24-1847-01A 5 9 5'UTR-CDS Intra-chr q12.2 q12.1 Seq+ 40036 ChimerSeq STARFusion TCGA_RNA-Seq DVL2-TMEM256 DVL2 chr17 7129740 - TMEM256 chr17 7307008 - Exonic hg19 OV TCGA-24-0966-01A 8 5 Out-of-frame Intra-chr p13.1 Seq+ 40037 ChimerSeq STARFusion TCGA_RNA-Seq EP300-PCBP3 EP300 chr22 41558783 + PCBP3 chr21 47330816 + Exonic hg19 OV TCGA-24-1546-01A 35 9 Out-of-frame Inter-chr q13.2 Oncogene q22.3 Seq+ 40038 ChimerSeq STARFusion TCGA_RNA-Seq AVEN-GOLGA8A AVEN chr15 34295233 - GOLGA8A chr15 34699936 - Exonic hg19 OV TCGA-24-1546-01A 14 1 CDS-3'UTR Intra-chr q14 q14 Seq+ 40039 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-1546-01A 12 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40040 ChimerSeq STARFusion TCGA_RNA-Seq HIPK2-DENND2A HIPK2 chr7 139477404 - DENND2A chr7 140287580 - Exonic hg19 OV TCGA-24-1546-01A 10 6 Out-of-frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Seq+ 40041 ChimerSeq STARFusion TCGA_RNA-Seq RPL13P12-PNMA2 RPL13P12 chr17 17286669 - PNMA2 chr8 26364477 - Exonic hg19 OV TCGA-13-0795-01A 25 0 Out-of-frame Inter-chr p21.2 40042 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-13-0795-01A 22 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40043 ChimerSeq STARFusion TCGA_RNA-Seq ATXN10-FBLN1 ATXN10 chr22 46088958 + FBLN1 chr22 45996187 + Exonic hg19 OV TCGA-13-0795-01A 11 18 In-Frame Intra-chr q13.31 q13.31 Tumor suppressor gene Seq+ 40044 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069803 - Exonic hg19 OV TCGA-13-0795-01A 14 0 Out-of-frame Inter-chr q12.3 q32.2 40045 ChimerSeq STARFusion TCGA_RNA-Seq NEAT1-KLHDC10 NEAT1 chr11 65193402 + KLHDC10 chr7 129774921 + Exonic hg19 OV TCGA-13-0795-01A 12 0 Out-of-frame Inter-chr q13.1 q32.2 40046 ChimerSeq STARFusion TCGA_RNA-Seq ATXN10-FBLN1 ATXN10 chr22 46085783 + FBLN1 chr22 45996187 + Exonic hg19 OV TCGA-13-0795-01A 2 17 Out-of-frame Intra-chr q13.31 q13.31 Tumor suppressor gene Seq+ 40047 ChimerSeq STARFusion TCGA_RNA-Seq KRT7-LINC00592 KRT7 chr12 52632559 + LINC00592 chr12 52617230 + Exonic hg19 OV TCGA-13-0795-01A 4 5 CDS-5'UTR Intra-chr q13.13 q13.13 40048 ChimerSeq STARFusion TCGA_RNA-Seq FDFT1-DEFB135 FDFT1 chr8 11696082 + DEFB135 chr8 11841930 + Exonic hg19 OV TCGA-30-1860-01A 188 43 In-Frame Intra-chr p23.1 p23.1 Seq+ 40049 ChimerSeq STARFusion TCGA_RNA-Seq ATRX-CYSLTR1 ATRX chrX 77041468 - CYSLTR1 chrX 77539037 - Exonic hg19 OV TCGA-30-1860-01A 61 7 CDS-5'UTR Intra-chr q21.1 Oncogene q21.1 Seq+ 40050 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-30-1860-01A 37 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40051 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A9-SEC23IP SLC39A9 chr14 69866182 + SEC23IP chr10 121689119 + Exonic hg19 OV TCGA-30-1860-01A 29 7 In-Frame Inter-chr q24.1 q26.11 Seq+ 40052 ChimerSeq STARFusion TCGA_RNA-Seq ATRX-CYSLTR1 ATRX chrX 77041468 - CYSLTR1 chrX 77529270 - Exonic hg19 OV TCGA-30-1860-01A 20 7 CDS-5'UTR Intra-chr q21.1 Oncogene q21.1 Seq+ 40053 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-30-1860-01A 20 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40054 ChimerSeq STARFusion TCGA_RNA-Seq ADM2-PPP6R2 ADM2 chr22 50921509 + PPP6R2 chr22 50882295 + Exonic hg19 OV TCGA-30-1860-01A 18 1 3'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 40055 ChimerSeq STARFusion TCGA_RNA-Seq ATRX-FNDC3CP ATRX chrX 77041468 - FNDC3CP chrX 77425634 - Exonic hg19 OV TCGA-30-1860-01A 12 2 Out-of-frame Intra-chr q21.1 Oncogene q21.1 Seq+ 40056 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A9-SEC23IP SLC39A9 chr14 69866182 + SEC23IP chr10 121689841 + Exonic hg19 OV TCGA-30-1860-01A 8 7 In-Frame Inter-chr q24.1 q26.11 Seq+ 40057 ChimerSeq STARFusion TCGA_RNA-Seq ADM2-PPP6R2 ADM2 chr22 50923336 + PPP6R2 chr22 50881927 + Exonic hg19 OV TCGA-30-1860-01A 7 1 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 40058 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A9-SEC23IP SLC39A9 chr14 69866182 + SEC23IP chr10 121691645 + Exonic hg19 OV TCGA-30-1860-01A 3 7 Out-of-frame Inter-chr q24.1 q26.11 Seq+ 40059 ChimerSeq STARFusion TCGA_RNA-Seq BTBD2-KLF16 BTBD2 chr19 2015296 - KLF16 chr19 1854759 - Exonic hg19 OV TCGA-13-0726-01A 24 14 Out-of-frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 40060 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734942 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-13-0726-01A 23 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40061 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821633 - Exonic hg19 OV TCGA-13-0924-01A 6 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40062 ChimerSeq STARFusion TCGA_RNA-Seq BCL2L1-RHAG BCL2L1 chr20 30309458 - RHAG chr6 49583484 - Exonic hg19 OV TCGA-13-0924-01A 4 3 In-Frame Inter-chr q11.21 Oncogene p12.3 Seq+ 40063 ChimerSeq STARFusion TCGA_RNA-Seq KLHL3-C16orf45 KLHL3 chr5 137071322 - C16orf45 chr16 15609162 + Exonic hg19 OV TCGA-13-0924-01A 4 3 Out-of-frame Inter-chr q31.2 Seq+ 40064 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-36-1576-01A 37 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40065 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106209411 - Exonic hg19 OV TCGA-36-1576-01A 21 0 Out-of-frame Inter-chr q21.2 32.33 40066 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076851 + IGHG1 chr14 106209411 - Exonic hg19 OV TCGA-36-1576-01A 21 0 Out-of-frame Inter-chr q21.2 q32.33 40067 ChimerSeq STARFusion TCGA_RNA-Seq CD81-KCNQ1 CD81 chr11 2398845 + KCNQ1 chr11 2683191 + Exonic hg19 OV TCGA-36-1576-01A 17 7 Out-of-frame Intra-chr p15.5 p15.5 Seq+ 40068 ChimerSeq STARFusion TCGA_RNA-Seq THRAP3-MAP7D1 THRAP3 chr1 36690106 + MAP7D1 chr1 36641800 + Exonic hg19 OV TCGA-36-1576-01A 12 2 5'UTR-CDS Intra-chr p34.3 p34.3 Seq+ 40069 ChimerSeq STARFusion TCGA_RNA-Seq THRAP3-MAP7D1 THRAP3 chr1 36690106 + MAP7D1 chr1 36642298 + Exonic hg19 OV TCGA-36-1576-01A 10 2 5'UTR-CDS Intra-chr p34.3 p34.3 Seq+ 40070 ChimerSeq STARFusion TCGA_RNA-Seq ADAM9-C17orf51 ADAM9 chr8 38913291 + C17orf51 chr17 21438799 - Exonic hg19 OV TCGA-36-1576-01A 9 4 In-Frame Inter-chr p11.2 Seq+ 40071 ChimerSeq STARFusion TCGA_RNA-Seq PHRF1-PTDSS2 PHRF1 chr11 609720 + PTDSS2 chr11 479085 + Exonic hg19 OV TCGA-36-1576-01A 9 1 In-Frame Intra-chr p15.5 Seq+ 40072 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-36-1576-01A 9 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40073 ChimerSeq STARFusion TCGA_RNA-Seq LAPTM4B-MTDH LAPTM4B chr8 98788336 + MTDH chr8 98736828 + Exonic hg19 OV TCGA-36-1576-01A 7 2 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 40074 ChimerSeq STARFusion TCGA_RNA-Seq RHPN2-SLC7A10 RHPN2 chr19 33555690 - SLC7A10 chr19 33706879 - Exonic hg19 OV TCGA-36-1576-01A 6 6 Out-of-frame Intra-chr q13.11 q13.11 Seq+ 40075 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2B-NTNG2 PRRC2B chr9 134269650 + NTNG2 chr9 135073353 + Exonic hg19 OV TCGA-36-1576-01A 6 5 5'UTR-CDS Intra-chr q34.13 q34.13 Seq+ 40076 ChimerSeq STARFusion TCGA_RNA-Seq KANK3-SPC24 KANK3 chr19 8399384 - SPC24 chr19 11259914 - Exonic hg19 OV TCGA-36-1576-01A 5 5 In-Frame Intra-chr p13.2 p13.2 Seq+ 40077 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-30-1892-01A 17 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40078 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2B-PPAPDC3 PRRC2B chr9 134358832 + PPAPDC3 chr9 134183310 + Exonic hg19 OV TCGA-30-1892-01A 11 0 Out-of-frame Intra-chr q34.13 40079 ChimerSeq STARFusion TCGA_RNA-Seq MROH1-MAF1 MROH1 chr8 145255444 + MAF1 chr8 145160543 + Exonic hg19 OV TCGA-30-1892-01A 4 2 Out-of-frame Intra-chr q24.3 q24.3 40080 ChimerSeq STARFusion TCGA_RNA-Seq DPYD-CSNK1G1 DPYD chr1 98386440 - CSNK1G1 chr15 64551440 - Exonic hg19 OV TCGA-13-1510-01A 65 19 Out-of-frame Inter-chr p21.3 Oncogene q22.31 Seq+ 40081 ChimerSeq STARFusion TCGA_RNA-Seq UBE4B-RBP7 UBE4B chr1 10132272 + RBP7 chr1 10067628 + Exonic hg19 OV TCGA-13-1510-01A 37 15 In-Frame Intra-chr p36.22 Tumor suppressor gene p36.22 Seq+ 40082 ChimerSeq STARFusion TCGA_RNA-Seq CDKAL1-SMARCA2 CDKAL1 chr6 20548936 + SMARCA2 chr9 2192704 + Exonic hg19 OV TCGA-13-1510-01A 32 16 Out-of-frame Inter-chr p22.3 p24.3 Tumor suppressor gene Seq+ 40083 ChimerSeq STARFusion TCGA_RNA-Seq RPL13P12-PNMA2 RPL13P12 chr17 17286669 - PNMA2 chr8 26364477 - Exonic hg19 OV TCGA-13-1510-01A 25 0 Out-of-frame Inter-chr p21.2 40084 ChimerSeq STARFusion TCGA_RNA-Seq TMF1-UBA3 TMF1 chr3 69101399 - UBA3 chr3 69106460 - Exonic hg19 OV TCGA-13-1510-01A 13 4 5'UTR-CDS Intra-chr p14.1 Transcription factor p14.1 40085 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-13-1510-01A 12 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40086 ChimerSeq STARFusion TCGA_RNA-Seq TXNRD1-SDS TXNRD1 chr12 104682818 + SDS chr12 113863625 - Exonic hg19 OV TCGA-13-1510-01A 10 3 5'UTR-5'UTR Intra-chr q23.3 q24.13 Seq+ 40087 ChimerSeq STARFusion TCGA_RNA-Seq TXNRD1-SDS TXNRD1 chr12 104682818 + SDS chr12 113837515 - Exonic hg19 OV TCGA-13-1510-01A 9 3 5'UTR-5'UTR Intra-chr q23.3 q24.13 Seq+ 40088 ChimerSeq STARFusion TCGA_RNA-Seq YWHAG-GPR37L1 YWHAG chr7 75988039 - GPR37L1 chr1 202096869 + Exonic hg19 OV TCGA-24-1471-01A 217 16 In-Frame Inter-chr q11.23 q32.1 Seq+ 40089 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF28-SEZ6 ARHGEF28 chr5 72980709 + SEZ6 chr17 27296970 - Exonic hg19 OV TCGA-24-1471-01A 51 0 Out-of-frame Inter-chr q13.2 q11.2 Seq+ 40090 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-HADHA MAP4 chr3 48130263 - HADHA chr2 26462011 - Exonic hg19 OV TCGA-24-1471-01A 43 2 5'UTR-CDS Inter-chr p21.31 p23.3 Seq+ 40091 ChimerSeq STARFusion TCGA_RNA-Seq RPL13P12-PNMA2 RPL13P12 chr17 17286669 - PNMA2 chr8 26364477 - Exonic hg19 OV TCGA-24-1471-01A 19 0 Out-of-frame Inter-chr p21.2 40092 ChimerSeq STARFusion TCGA_RNA-Seq SCAF8-TIAM2 SCAF8 chr6 155055064 + TIAM2 chr6 155265250 + Exonic hg19 OV TCGA-29-2414-01A 32 5 CDS-5'UTR Intra-chr q25.2 q25.2 40093 ChimerSeq STARFusion TCGA_RNA-Seq BMP7-DYNC2LI1 BMP7 chr20 55777531 - DYNC2LI1 chr2 44031781 + Exonic hg19 OV TCGA-29-2414-01A 21 4 In-Frame Inter-chr q13.31 p21 Seq+ 40094 ChimerSeq STARFusion TCGA_RNA-Seq EXOC4-TRUB2 EXOC4 chr7 133164892 + TRUB2 chr9 131079505 - Exonic hg19 OV TCGA-09-2045-01A 13 2 In-Frame Inter-chr q33 q34.11 Seq+ 40095 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-09-2045-01A 12 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40096 ChimerSeq STARFusion TCGA_RNA-Seq SOX6-ARV1 SOX6 chr11 16205432 - ARV1 chr1 231124066 + Exonic hg19 OV TCGA-09-2045-01A 6 0 In-Frame Inter-chr p15.2 Transcription factor q42.2 Seq+ 40097 ChimerSeq STARFusion TCGA_RNA-Seq LCN2-LMX1B LCN2 chr9 130915405 + LMX1B chr9 129458118 + Exonic hg19 OV TCGA-09-2045-01A 5 0 3'UTR-CDS Intra-chr q34.11 q33.3 Transcription factor Seq+ 40098 ChimerSeq STARFusion TCGA_RNA-Seq TCF25-GPR89A TCF25 chr16 89962491 + GPR89A chr1 145788835 - Exonic hg19 OV TCGA-09-2045-01A 5 0 Out-of-frame Inter-chr q24.3 q21.1 40099 ChimerSeq STARFusion TCGA_RNA-Seq GRIK5-HECTD4 GRIK5 chr19 42557754 - HECTD4 chr12 112681813 - Exonic hg19 OV TCGA-09-2045-01A 3 2 Out-of-frame Inter-chr q13.2 q24.13 Seq+ 40100 ChimerSeq STARFusion TCGA_RNA-Seq FOXJ3-PGM1 FOXJ3 chr1 42664773 - PGM1 chr1 64095096 + Exonic hg19 OV TCGA-30-1891-01A 59 3 In-Frame Intra-chr p34.2 Transcription factor p31.3 Seq+ 40101 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069803 - Exonic hg19 OV TCGA-30-1891-01A 44 0 Out-of-frame Inter-chr q12.3 q32.2 40102 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-30-1891-01A 34 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40103 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-30-1891-01A 17 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40104 ChimerSeq STARFusion TCGA_RNA-Seq PGM1-FOXJ3 PGM1 chr1 64059405 + FOXJ3 chr1 42660735 - Exonic hg19 OV TCGA-30-1891-01A 8 1 In-Frame Intra-chr p31.3 p34.2 Transcription factor 40105 ChimerSeq STARFusion TCGA_RNA-Seq ARID4A-KIAA0586 ARID4A chr14 58765418 + KIAA0586 chr14 59006789 + Exonic hg19 OV TCGA-29-1703-01A 77 6 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 40106 ChimerSeq STARFusion TCGA_RNA-Seq ARID4A-KIAA0586 ARID4A chr14 58765418 + KIAA0586 chr14 59014499 + Exonic hg19 OV TCGA-29-1703-01A 33 6 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 40107 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734942 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-29-1703-01A 26 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40108 ChimerSeq STARFusion TCGA_RNA-Seq ARID4A-KIAA0586 ARID4A chr14 58765418 + KIAA0586 chr14 58979240 + Exonic hg19 OV TCGA-29-1703-01A 22 6 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 40109 ChimerSeq STARFusion TCGA_RNA-Seq ZNF626-RERG ZNF626 chr19 20828490 - RERG chr12 15490404 - Exonic hg19 OV TCGA-29-1703-01A 13 7 CDS-5'UTR Inter-chr p12 Transcription factor p12.3 Seq+ 40110 ChimerSeq STARFusion TCGA_RNA-Seq LSM14A-GPI LSM14A chr19 34699956 + GPI chr19 34868408 + Exonic hg19 OV TCGA-29-1703-01A 10 4 Out-of-frame Intra-chr Seq+ 40111 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-29-1703-01A 10 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40112 ChimerSeq STARFusion TCGA_RNA-Seq BCAT1-VPS72 BCAT1 chr12 25031464 - VPS72 chr1 151150621 - Exonic hg19 OV TCGA-29-1703-01A 3 7 Out-of-frame Inter-chr p12.1 q21.3 Seq+ 40113 ChimerSeq STARFusion TCGA_RNA-Seq ALDH7A1P1-PIP ALDH7A1P1 chr5 76586703 + PIP chr7 142832287 + Exonic hg19 OV TCGA-20-1682-01A 78 20 Out-of-frame Inter-chr q13.3 q34 40114 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-20-1682-01A 67 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40115 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-20-1682-01A 39 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40116 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734942 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-20-1682-01A 18 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40117 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L3-NF1P3 SIPA1L3 chr19 38579491 + NF1P3 chr21 15373248 + Exonic hg19 OV TCGA-20-1682-01A 9 3 Out-of-frame Inter-chr q13.13 q11.2 Seq+ 40118 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D8B-RNF128 TBC1D8B chrX 106046035 + RNF128 chrX 106034296 + Exonic hg19 OV TCGA-20-1682-01A 5 7 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 40119 ChimerSeq STARFusion TCGA_RNA-Seq TMEM135-ELOVL1 TMEM135 chr11 86947726 + ELOVL1 chr1 43831294 - Exonic hg19 OV TCGA-20-1682-01A 4 3 5'UTR-5'UTR Inter-chr q14.2 p34.2 Seq+ 40120 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-EMID1 MYH9 chr22 36744949 - EMID1 chr22 29610915 + Exonic hg19 OV TCGA-25-2398-01A 46 5 Out-of-frame Intra-chr q12.3 Oncogene Tumor suppressor gene q12.2 Seq+ 40121 ChimerSeq STARFusion TCGA_RNA-Seq SLC22A3-PVT1 SLC22A3 chr6 160769880 + PVT1 chr8 129108764 + Exonic hg19 OV TCGA-25-2398-01A 24 4 CDS-5'UTR Inter-chr q25.3 q24.21 Seq+ 40122 ChimerSeq STARFusion TCGA_RNA-Seq ADCK5-INPP5B ADCK5 chr8 145603179 + INPP5B chr1 38328102 - Exonic hg19 OV TCGA-25-2398-01A 14 3 Out-of-frame Inter-chr q24.3 Atypical:ABC1 p34.3 Seq+ 40123 ChimerSeq STARFusion TCGA_RNA-Seq FXR2-CTDNEP1 FXR2 chr17 7504727 - CTDNEP1 chr17 7150662 - Exonic hg19 OV TCGA-25-2398-01A 12 2 In-Frame Intra-chr p13.1 p13.1 40124 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069800 - Exonic hg19 OV TCGA-25-2398-01A 8 0 Out-of-frame Inter-chr q12.3 q32.2 40125 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-25-2398-01A 8 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40126 ChimerSeq STARFusion TCGA_RNA-Seq SLC22A3-PVT1 SLC22A3 chr6 160769880 + PVT1 chr8 129082406 + Exonic hg19 OV TCGA-25-2398-01A 7 4 CDS-5'UTR Inter-chr q25.3 q24.21 Seq+ 40127 ChimerSeq STARFusion TCGA_RNA-Seq ZNF529-CLEC11A ZNF529 chr19 37080517 - CLEC11A chr19 51227162 + Exonic hg19 OV TCGA-25-2398-01A 6 1 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.33 Seq+ 40128 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-UBE2D2 MATR3 chr5 138629494 + UBE2D2 chr5 138979957 + Exonic hg19 OV TCGA-13-1403-01A 190 149 5'UTR-5'UTR Intra-chr q31.2 q31.2 Seq+ 40129 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-UBE2D2 MATR3 chr5 138629717 + UBE2D2 chr5 138979957 + Exonic hg19 OV TCGA-13-1403-01A 33 148 In-Frame Intra-chr q31.2 q31.2 Seq+ 40130 ChimerSeq STARFusion TCGA_RNA-Seq SH3YL1-ACP1 SH3YL1 chr2 263984 - ACP1 chr2 271866 + Exonic hg19 OV TCGA-13-1403-01A 28 19 In-Frame Intra-chr p25.3 p25.3 Seq+ 40131 ChimerSeq STARFusion TCGA_RNA-Seq DDX10-ATM DDX10 chr11 108722936 + ATM chr11 108235809 + Exonic hg19 OV TCGA-13-1403-01A 18 14 In-Frame Intra-chr q22.3 q22.3 Atypical:PIKK Oncogene Tumor suppressor gene Seq+ 40132 ChimerSeq STARFusion TCGA_RNA-Seq SH3YL1-ACP1 SH3YL1 chr2 264542 - ACP1 chr2 271866 + Exonic hg19 OV TCGA-13-1403-01A 11 19 5'UTR-5'UTR Intra-chr p25.3 p25.3 Seq+ 40133 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R37-IGSF23 PPP1R37 chr19 45596785 + IGSF23 chr19 45127000 + Exonic hg19 OV TCGA-13-1403-01A 12 7 Out-of-frame Intra-chr q13.32 q13.31 Seq+ 40134 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0100-FAM222B KIAA0100 chr17 26958497 - FAM222B chr17 27093725 - Exonic hg19 OV TCGA-13-1403-01A 8 4 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 40135 ChimerSeq STARFusion TCGA_RNA-Seq LYAR-CORO1B LYAR chr4 4291763 - CORO1B chr11 67208985 - Exonic hg19 OV TCGA-13-1403-01A 5 13 5'UTR-CDS Inter-chr p16.3 q13.2 Seq+ 40136 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0100-FAM222B KIAA0100 chr17 26955283 - FAM222B chr17 27093725 - Exonic hg19 OV TCGA-13-1403-01A 7 4 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 40137 ChimerSeq STARFusion TCGA_RNA-Seq BAZ2B-PLA2R1 BAZ2B chr2 160284822 - PLA2R1 chr2 160825870 - Exonic hg19 OV TCGA-13-1403-01A 5 5 Out-of-frame Intra-chr q24.2 Transcription factor q24.2 Tumor suppressor gene Seq+ 40138 ChimerSeq STARFusion TCGA_RNA-Seq TUBGCP6-PLXNB2 TUBGCP6 chr22 50678633 - PLXNB2 chr22 50723094 - Exonic hg19 OV TCGA-13-1403-01A 5 4 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 40139 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R37-IGSF23 PPP1R37 chr19 45596785 + IGSF23 chr19 45130717 + Exonic hg19 OV TCGA-13-1403-01A 3 7 In-Frame Intra-chr q13.32 q13.31 Seq+ 40140 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R37-IGSF23 PPP1R37 chr19 45596785 + IGSF23 chr19 45138701 + Exonic hg19 OV TCGA-13-1403-01A 2 7 Out-of-frame Intra-chr q13.32 q13.31 Seq+ 40141 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-TM6SF1 HOMER2 chr15 83621283 - TM6SF1 chr15 83781549 + Exonic hg19 OV TCGA-59-2363-01A 43 10 In-Frame Intra-chr q25.2 Tumor suppressor gene q25.2 Seq+ 40142 ChimerSeq STARFusion TCGA_RNA-Seq SPAG1-POLR2K SPAG1 chr8 101170346 + POLR2K chr8 101163575 + Exonic hg19 OV TCGA-59-2363-01A 28 4 5'UTR-5'UTR Intra-chr q22.2 q22.2 Seq+ 40143 ChimerSeq STARFusion TCGA_RNA-Seq MAST4-PPWD1 MAST4 chr5 66386059 + PPWD1 chr5 64863340 + Exonic hg19 OV TCGA-59-2363-01A 22 1 Out-of-frame Intra-chr q12.3 AGC:MAST q12.3 Seq+ 40144 ChimerSeq STARFusion TCGA_RNA-Seq SPAG1-POLR2K SPAG1 chr8 101174648 + POLR2K chr8 101163575 + Exonic hg19 OV TCGA-59-2363-01A 14 4 CDS-5'UTR Intra-chr q22.2 q22.2 Seq+ 40145 ChimerSeq STARFusion TCGA_RNA-Seq CCNY-PARD3 CCNY chr10 35626135 + PARD3 chr10 34985347 - Exonic hg19 OV TCGA-59-2363-01A 11 1 Out-of-frame Intra-chr p11.21 p11.21 KB Seq+ 40146 ChimerSeq STARFusion TCGA_RNA-Seq EXT1-PTK2 EXT1 chr8 118816961 - PTK2 chr8 141774389 - Exonic hg19 OV TCGA-59-2363-01A 6 2 Out-of-frame Intra-chr q24.11 Oncogene Tumor suppressor gene q24.3 Seq+ 40147 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-13-0883-01A 11 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40148 ChimerSeq STARFusion TCGA_RNA-Seq OTUD5-PCSK1N OTUD5 chrX 48791737 - PCSK1N chrX 48690751 - Exonic hg19 OV TCGA-29-1761-01A 54 0 In-Frame Intra-chr p11.23 p11.23 Seq+ 40149 ChimerSeq STARFusion TCGA_RNA-Seq AP1M2-TMED1 AP1M2 chr19 10697866 - TMED1 chr19 10943889 - Exonic hg19 OV TCGA-29-1761-01A 24 0 In-Frame Intra-chr p13.2 p13.2 Seq+ 40150 ChimerSeq STARFusion TCGA_RNA-Seq SGPL1-COL13A1 SGPL1 chr10 72617447 + COL13A1 chr10 71655306 + Exonic hg19 OV TCGA-29-1761-01A 24 0 In-Frame Intra-chr q22.1 q22.1 Seq+ 40151 ChimerSeq STARFusion TCGA_RNA-Seq STAU1-ZNFX1 STAU1 chr20 47768119 - ZNFX1 chr20 47855837 - Exonic hg19 OV TCGA-29-1761-01A 19 0 CDS-3'UTR Intra-chr q13.13 q13.13 40152 ChimerSeq STARFusion TCGA_RNA-Seq CTNNBL1-SULF2 CTNNBL1 chr20 36322554 + SULF2 chr20 46386207 - Exonic hg19 OV TCGA-29-1761-01A 11 0 CDS-5'UTR Intra-chr q11.23 q13.12 40153 ChimerSeq STARFusion TCGA_RNA-Seq UBA2-PDCD2L UBA2 chr19 34936026 + PDCD2L chr19 34916895 + Exonic hg19 OV TCGA-29-1697-01A 582 57 Out-of-frame Intra-chr q13.11 q13.11 KB Pub Seq+ 40154 ChimerSeq STARFusion TCGA_RNA-Seq MIER2-RPL26 MIER2 chr19 325635 - RPL26 chr17 8285633 - Exonic hg19 OV TCGA-29-1697-01A 204 28 CDS-5'UTR Inter-chr p13.3 p13.1 Seq+ 40155 ChimerSeq STARFusion TCGA_RNA-Seq CNP-TTC25 CNP chr17 40120758 + TTC25 chr17 40107235 + Exonic hg19 OV TCGA-29-1697-01A 101 26 Out-of-frame Intra-chr q21.2 q21.2 40156 ChimerSeq STARFusion TCGA_RNA-Seq PPIA-OGDH PPIA chr7 44839473 + OGDH chr7 44733424 + Exonic hg19 OV TCGA-29-1697-01A 104 4 Out-of-frame Intra-chr p13 p13 Seq+ 40157 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0100-SDF2 KIAA0100 chr17 26959103 - SDF2 chr17 26979481 - Exonic hg19 OV TCGA-29-1697-01A 68 27 Out-of-frame Intra-chr q11.2 q11.2 40158 ChimerSeq STARFusion TCGA_RNA-Seq EPN1-CCDC106 EPN1 chr19 56190221 + CCDC106 chr19 56160368 + Exonic hg19 OV TCGA-29-1697-01A 68 16 CDS-5'UTR Intra-chr q13.42 q13.42 Seq+ 40159 ChimerSeq STARFusion TCGA_RNA-Seq GABPB2-MLLT11 GABPB2 chr1 151043410 + MLLT11 chr1 151039695 + Exonic hg19 OV TCGA-29-1697-01A 68 7 5'UTR-5'UTR Intra-chr q21.3 q21.3 Seq+ 40160 ChimerSeq STARFusion TCGA_RNA-Seq DAZAP1-NDUFS7 DAZAP1 chr19 1417539 + NDUFS7 chr19 1383707 + Exonic hg19 OV TCGA-29-1697-01A 57 17 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 40161 ChimerSeq STARFusion TCGA_RNA-Seq CNP-TTC25 CNP chr17 40120758 + TTC25 chr17 40113400 + Exonic hg19 OV TCGA-29-1697-01A 53 26 Out-of-frame Intra-chr q21.2 q21.2 40162 ChimerSeq STARFusion TCGA_RNA-Seq CBX1-SKAP1 CBX1 chr17 46154227 - SKAP1 chr17 46214699 - Exonic hg19 OV TCGA-29-1697-01A 49 2 Out-of-frame Intra-chr q21.32 q21.32 Seq+ 40163 ChimerSeq STARFusion TCGA_RNA-Seq LRIG1-SLC25A26 LRIG1 chr3 66436405 - SLC25A26 chr3 66419902 + Exonic hg19 OV TCGA-29-1697-01A 36 3 In-Frame Intra-chr Tumor suppressor gene Seq+ 40164 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-CES4A CBFB chr16 67070658 + CES4A chr16 67029531 + Exonic hg19 OV TCGA-29-1697-01A 35 4 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 40165 ChimerSeq STARFusion TCGA_RNA-Seq CELSR2-KIAA1324 CELSR2 chr1 109808828 + KIAA1324 chr1 109714488 + Exonic hg19 OV TCGA-29-1697-01A 29 1 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 40166 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-MTHFD1L ESR1 chr6 152129499 + MTHFD1L chr6 151330955 + Exonic hg19 OV TCGA-29-1697-01A 26 7 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 Seq+ 40167 ChimerSeq STARFusion TCGA_RNA-Seq SARNP-CS SARNP chr12 56188591 - CS chr12 56676775 - Exonic hg19 OV TCGA-29-1697-01A 25 3 Out-of-frame Intra-chr q13.2 q13.3 40168 ChimerSeq STARFusion TCGA_RNA-Seq DAZAP1-NDUFS7 DAZAP1 chr19 1417539 + NDUFS7 chr19 1387810 + Exonic hg19 OV TCGA-29-1697-01A 19 17 In-Frame Intra-chr p13.3 p13.3 Seq+ 40169 ChimerSeq STARFusion TCGA_RNA-Seq TJP2-FXN TJP2 chr9 71766687 + FXN chr9 71714817 + Exonic hg19 OV TCGA-29-1697-01A 23 1 5'UTR-CDS Intra-chr q21.11 q21.11 Tumor suppressor gene Seq+ 40170 ChimerSeq STARFusion TCGA_RNA-Seq MX2-FAM3B MX2 chr21 42752078 + FAM3B chr21 42716403 + Exonic hg19 OV TCGA-29-1697-01A 20 10 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 40171 ChimerSeq STARFusion TCGA_RNA-Seq EPN1-CCDC106 EPN1 chr19 56190221 + CCDC106 chr19 56160571 + Exonic hg19 OV TCGA-29-1697-01A 16 16 Out-of-frame Intra-chr q13.42 q13.42 Seq+ 40172 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K12-ATF7 MAP3K12 chr12 53876885 - ATF7 chr12 53907985 - Exonic hg19 OV TCGA-29-1697-01A 18 5 Out-of-frame Intra-chr q13.13 q13.13 Transcription factor Seq+ 40173 ChimerSeq STARFusion TCGA_RNA-Seq ST3GAL2-COG4 ST3GAL2 chr16 70432095 - COG4 chr16 70524295 - Exonic hg19 OV TCGA-29-1697-01A 18 1 In-Frame Intra-chr q22.1 q22.1 Seq+ 40174 ChimerSeq STARFusion TCGA_RNA-Seq EPN1-CCDC106 EPN1 chr19 56190221 + CCDC106 chr19 56160312 + Exonic hg19 OV TCGA-29-1697-01A 14 16 CDS-5'UTR Intra-chr q13.42 q13.42 Seq+ 40175 ChimerSeq STARFusion TCGA_RNA-Seq EPS15L1-CHERP EPS15L1 chr19 16582724 - CHERP chr19 16652854 - Exonic hg19 OV TCGA-29-1697-01A 18 0 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 40176 ChimerSeq STARFusion TCGA_RNA-Seq RFX5-POGZ RFX5 chr1 151316673 - POGZ chr1 151414681 - Exonic hg19 OV TCGA-29-1697-01A 13 3 CDS-5'UTR Intra-chr q21.3 Transcription factor q21.3 Seq+ 40177 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-DPF2 MALAT1 chr11 65271040 + DPF2 chr11 65113113 + Exonic hg19 OV TCGA-29-1697-01A 12 3 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 40178 ChimerSeq STARFusion TCGA_RNA-Seq DAZAP1-NDUFS7 DAZAP1 chr19 1417839 + NDUFS7 chr19 1383548 + Exonic hg19 OV TCGA-29-1697-01A 6 17 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 40179 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-MTHFD1L ESR1 chr6 152130406 + MTHFD1L chr6 151330955 + Exonic hg19 OV TCGA-29-1697-01A 8 7 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 Seq+ 40180 ChimerSeq STARFusion TCGA_RNA-Seq LSM12-HDAC5 LSM12 chr17 42143872 - HDAC5 chr17 42162043 - Exonic hg19 OV TCGA-29-1707-02A 73 26 Out-of-frame Intra-chr q21.31 q21.31 Seq+ 40181 ChimerSeq STARFusion TCGA_RNA-Seq LSM12-HDAC5 LSM12 chr17 42143872 - HDAC5 chr17 42162523 - Exonic hg19 OV TCGA-29-1707-02A 27 26 In-Frame Intra-chr q21.31 q21.31 Seq+ 40182 ChimerSeq STARFusion TCGA_RNA-Seq LSM12-HDAC5 LSM12 chr17 42143793 - HDAC5 chr17 42162523 - Exonic hg19 OV TCGA-29-1707-02A 21 26 Out-of-frame Intra-chr q21.31 q21.31 Seq+ 40183 ChimerSeq STARFusion TCGA_RNA-Seq CAMLG-AUTS2 CAMLG chr5 134074482 + AUTS2 chr7 70163555 + Exonic hg19 OV TCGA-29-1707-02A 20 4 Out-of-frame Inter-chr q31.1 q11.22 Seq+ 40184 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2B-PPAPDC3 PRRC2B chr9 134269650 + PPAPDC3 chr9 134183310 + Exonic hg19 OV TCGA-29-1707-02A 20 4 5'UTR-CDS Intra-chr q34.13 40185 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-29-1707-02A 15 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40186 ChimerSeq STARFusion TCGA_RNA-Seq GALNT18-ANO5 GALNT18 chr11 11642906 - ANO5 chr11 22225350 + Exonic hg19 OV TCGA-29-1707-02A 10 2 Out-of-frame Intra-chr p15.4 p14.3 40187 ChimerSeq STARFusion TCGA_RNA-Seq MIEN1-WIPF2 MIEN1 chr17 37886447 - WIPF2 chr17 38412643 + Exonic hg19 OV TCGA-30-1853-01A 17 3 CDS-5'UTR Intra-chr q12 q21.2 Seq+ 40188 ChimerSeq STARFusion TCGA_RNA-Seq MGRN1-MSI2 MGRN1 chr16 4733933 + MSI2 chr17 55754348 + Exonic hg19 OV TCGA-30-1853-01A 8 3 Out-of-frame Inter-chr p13.3 q22 Seq+ 40189 ChimerSeq STARFusion TCGA_RNA-Seq MGRN1-MSI2 MGRN1 chr16 4733933 + MSI2 chr17 55756910 + Exonic hg19 OV TCGA-30-1853-01A 7 3 CDS-3'UTR Inter-chr p13.3 q22 Seq+ 40190 ChimerSeq STARFusion TCGA_RNA-Seq DOK4-PLLP DOK4 chr16 57513354 - PLLP chr16 57295982 - Exonic hg19 OV TCGA-25-1871-01A 45 2 In-Frame Intra-chr q21 q13 Seq+ 40191 ChimerSeq STARFusion TCGA_RNA-Seq CSNK2A1-SNRPB CSNK2A1 chr20 524316 - SNRPB chr20 2448404 - Exonic hg19 OV TCGA-13-0727-01A 73 29 5'UTR-CDS Intra-chr p13 Oncogene p13 Seq+ 40192 ChimerSeq STARFusion TCGA_RNA-Seq LINC00493-SEC23B LINC00493 chr20 18548240 + SEC23B chr20 18541295 + Exonic hg19 OV TCGA-13-0727-01A 54 3 5'UTR-CDS Intra-chr p11.23 Seq+ 40193 ChimerSeq STARFusion TCGA_RNA-Seq TPSAB1-PRSS27 TPSAB1 chr16 1291991 + PRSS27 chr16 2762815 - Exonic hg19 OV TCGA-13-0727-01A 12 0 In-Frame Intra-chr p13.3 p13.3 40194 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-13-0720-01A 24 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40195 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-13-0720-01A 16 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40196 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-13-0720-01A 10 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40197 ChimerSeq STARFusion TCGA_RNA-Seq ANP32B-PRKG1 ANP32B chr9 100745891 + PRKG1 chr10 53814244 + Exonic hg19 OV TCGA-13-0720-01A 6 1 In-Frame Inter-chr q22.33 q11.23 40198 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-CLU MALAT1 chr11 65267154 + CLU chr8 27461914 - Exonic hg19 OV TCGA-13-0720-01A 4 3 Out-of-frame Inter-chr q13.1 p21.1 Tumor suppressor gene 40199 ChimerSeq STARFusion TCGA_RNA-Seq LSM7-GNG7 LSM7 chr19 2328386 - GNG7 chr19 2520723 - Exonic hg19 OV TCGA-23-1123-01A 116 134 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 40200 ChimerSeq STARFusion TCGA_RNA-Seq PEAK1-LINGO1 PEAK1 chr15 77712348 - LINGO1 chr15 78027395 - Exonic hg19 OV TCGA-23-1123-01A 45 25 5'UTR-5'UTR Intra-chr q24.3 q24.3 40201 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-23-1123-01A 50 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40202 ChimerSeq STARFusion TCGA_RNA-Seq SRGAP3-RAD18 SRGAP3 chr3 9290569 - RAD18 chr3 8983488 - Exonic hg19 OV TCGA-23-1123-01A 46 11 Out-of-frame Intra-chr p25.3 Tumor suppressor gene p25.3 Seq+ 40203 ChimerSeq STARFusion TCGA_RNA-Seq PANK2-HSPA12B PANK2 chr20 3870375 + HSPA12B chr20 3719305 + Exonic hg19 OV TCGA-23-1123-01A 34 17 CDS-5'UTR Intra-chr p13 p13 Seq+ 40204 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1-YIPF7 WHSC1 chr4 1962878 + YIPF7 chr4 44638102 - Exonic hg19 OV TCGA-23-1123-01A 22 16 Out-of-frame Intra-chr Oncogene p12 Seq+ 40205 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1-YIPF7 WHSC1 chr4 1962878 + YIPF7 chr4 44652118 - Exonic hg19 OV TCGA-23-1123-01A 22 16 Out-of-frame Intra-chr Oncogene p12 Seq+ 40206 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-23-1123-01A 24 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40207 ChimerSeq STARFusion TCGA_RNA-Seq PANK2-HSPA12B PANK2 chr20 3872058 + HSPA12B chr20 3719305 + Exonic hg19 OV TCGA-23-1123-01A 13 17 5'UTR-5'UTR Intra-chr p13 p13 Seq+ 40208 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-23-1123-01A 15 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40209 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A42-SUGP2 SLC25A42 chr19 19174924 + SUGP2 chr19 19119237 - Exonic hg19 OV TCGA-23-1123-01A 11 9 5'UTR-CDS Intra-chr p13.11 p13.11 Seq+ 40210 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH1-SPTAN1 NOTCH1 chr9 139390682 - SPTAN1 chr9 131386607 + Exonic hg19 OV TCGA-23-1123-01A 11 2 Out-of-frame Intra-chr q34.3 Oncogene Tumor suppressor gene q34.11 Seq+ 40211 ChimerSeq STARFusion TCGA_RNA-Seq NPLOC4-FASN NPLOC4 chr17 79564271 - FASN chr17 80042829 - Exonic hg19 OV TCGA-23-1123-01A 10 6 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 40212 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1-YIPF7 WHSC1 chr4 1962878 + YIPF7 chr4 44631565 - Exonic hg19 OV TCGA-23-1123-01A 3 16 Out-of-frame Intra-chr Oncogene p12 Seq+ 40213 ChimerSeq STARFusion TCGA_RNA-Seq ZNF561-MED16 ZNF561 chr19 9727721 - MED16 chr19 871253 - Exonic hg19 OV TCGA-13-1409-01A 27 2 In-Frame Intra-chr p13.2 Transcription factor p13.3 Seq+ 40214 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT1-STRA8 B4GALT1 chr9 33166756 - STRA8 chr7 134925271 + Exonic hg19 OV TCGA-23-1026-01B 43 8 Out-of-frame Inter-chr p21.1 q33 Seq+ 40215 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-CNBD2 EPB41L1 chr20 34700402 + CNBD2 chr20 34618279 + Exonic hg19 OV TCGA-23-1026-01B 24 4 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 40216 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-CACNG6 BCAS3 chr17 59024713 + CACNG6 chr19 54515205 + Exonic hg19 OV TCGA-23-1026-01B 21 8 Out-of-frame Inter-chr q23.2 q13.42 Seq+ 40217 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-23-1026-01B 15 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40218 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-23-1026-01B 13 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40219 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-23-1026-01B 11 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40220 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT1-STRA8 B4GALT1 chr9 33166756 - STRA8 chr7 134925239 + Exonic hg19 OV TCGA-23-1026-01B 5 8 Out-of-frame Inter-chr p21.1 q33 Seq+ 40221 ChimerSeq STARFusion TCGA_RNA-Seq PLCH1-MYOM2 PLCH1 chr3 155421935 - MYOM2 chr8 2088646 + Exonic hg19 OV TCGA-23-1026-01B 5 2 5'UTR-CDS Inter-chr q25.31 p23.3 40222 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-CNBD2 EPB41L1 chr20 34680735 + CNBD2 chr20 34618279 + Exonic hg19 OV TCGA-23-1026-01B 3 4 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 40223 ChimerSeq STARFusion TCGA_RNA-Seq SUMO2-KLK8 SUMO2 chr17 73177200 - KLK8 chr19 51504433 - Exonic hg19 OV TCGA-25-1630-01A 396 124 Out-of-frame Inter-chr q25.1 q13.41 40224 ChimerSeq STARFusion TCGA_RNA-Seq SUMO2-KLK9 SUMO2 chr17 73177200 - KLK9 chr19 51504433 - Exonic hg19 OV TCGA-25-1630-01A 396 124 Out-of-frame Inter-chr q25.1 q13.41 40225 ChimerSeq STARFusion TCGA_RNA-Seq SLC2A8-GARNL3 SLC2A8 chr9 130167270 + GARNL3 chr9 130151183 + Exonic hg19 OV TCGA-25-1630-01A 51 10 In-Frame Intra-chr q33.3 q33.3 Seq+ 40226 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-25-1630-01A 14 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40227 ChimerSeq STARFusion TCGA_RNA-Seq RPS17-SPP1 RPS17 chr15 82823332 - SPP1 chr4 88896869 + Exonic hg19 OV TCGA-25-1630-01A 8 5 Out-of-frame Inter-chr q25.2 q22.1 40228 ChimerSeq STARFusion TCGA_RNA-Seq NEO1-THSD4 NEO1 chr15 73470768 + THSD4 chr15 71704026 + Exonic hg19 OV TCGA-24-1428-01A 164 31 In-Frame Intra-chr q24.1 q23 Seq+ 40229 ChimerSeq STARFusion TCGA_RNA-Seq FOXK2-NARF FOXK2 chr17 80478183 + NARF chr17 80436676 + Exonic hg19 OV TCGA-24-1428-01A 125 51 Out-of-frame Intra-chr q25.3 Transcription factor q25.3 Seq+ 40230 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC5-TPD52L2 DNAJC5 chr20 62562375 + TPD52L2 chr20 62500649 + Exonic hg19 OV TCGA-24-1428-01A 124 43 In-Frame Intra-chr q13.33 q13.33 Seq+ 40231 ChimerSeq STARFusion TCGA_RNA-Seq BMP2K-LINC01088 BMP2K chr4 79697875 + LINC01088 chr4 80227845 + Exonic hg19 OV TCGA-24-1428-01A 40 15 Out-of-frame Intra-chr q21.21 q21.21 40232 ChimerSeq STARFusion TCGA_RNA-Seq TTC19-TMEM45A TTC19 chr17 15930016 + TMEM45A chr3 100287666 + Exonic hg19 OV TCGA-24-1428-01A 34 9 Out-of-frame Inter-chr p12 q12.2 Seq+ 40233 ChimerSeq STARFusion TCGA_RNA-Seq FOXK2-NARF FOXK2 chr17 80478183 + NARF chr17 80436447 + Exonic hg19 OV TCGA-24-1428-01A 18 51 Out-of-frame Intra-chr q25.3 Transcription factor q25.3 Seq+ 40234 ChimerSeq STARFusion TCGA_RNA-Seq BMP2K-LINC01088 BMP2K chr4 79697875 + LINC01088 chr4 80116990 + Exonic hg19 OV TCGA-24-1428-01A 26 15 Out-of-frame Intra-chr q21.21 q21.21 40235 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-1428-01A 26 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40236 ChimerSeq STARFusion TCGA_RNA-Seq TTC19-TMEM45A TTC19 chr17 15931651 + TMEM45A chr3 100287666 + Exonic hg19 OV TCGA-24-1428-01A 17 9 5'UTR-CDS Inter-chr p12 q12.2 Seq+ 40237 ChimerSeq STARFusion TCGA_RNA-Seq POM121C-ZP3 POM121C chr7 75070232 - ZP3 chr7 76063355 + Exonic hg19 OV TCGA-24-1428-01A 3 34 In-Frame Intra-chr q11.23 q11.23 40238 ChimerSeq STARFusion TCGA_RNA-Seq ZMYM4-AP2S1 ZMYM4 chr1 35865177 + AP2S1 chr19 47349399 - Exonic hg19 OV TCGA-24-1103-01A 44 14 In-Frame Inter-chr p34.3 q13.32 Seq+ 40239 ChimerSeq STARFusion TCGA_RNA-Seq HRH1-SLC6A11 HRH1 chr3 11196240 + SLC6A11 chr3 10953775 + Exonic hg19 OV TCGA-24-1103-01A 27 0 5'UTR-CDS Intra-chr p25.3 p25.3 Seq+ 40240 ChimerSeq STARFusion TCGA_RNA-Seq ARSG-AP2B1 ARSG chr17 66366665 + AP2B1 chr17 34044214 + Exonic hg19 OV TCGA-24-1103-01A 13 3 In-Frame Intra-chr q24.2 q12 Seq+ 40241 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-1103-01A 9 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40242 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-24-1103-01A 9 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40243 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-FAM168A FCHSD2 chr11 72851076 - FAM168A chr11 73122581 - Exonic hg19 OV TCGA-20-1683-01A 203 141 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 40244 ChimerSeq STARFusion TCGA_RNA-Seq NPEPPS-NDUFAF2 NPEPPS chr17 45646860 + NDUFAF2 chr5 60368952 + Exonic hg19 OV TCGA-20-1683-01A 177 40 In-Frame Inter-chr q21.32 q12.1 Seq+ 40245 ChimerSeq STARFusion TCGA_RNA-Seq ZNF740-SEPT9 ZNF740 chr12 53584281 + SEPT9 chr17 75494788 + Exonic hg19 OV TCGA-20-1683-01A 49 0 Out-of-frame Inter-chr q13.13 Transcription factor 40246 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-20-1683-01A 46 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40247 ChimerSeq STARFusion TCGA_RNA-Seq SCAP-SMARCC1 SCAP chr3 47484362 - SMARCC1 chr3 47779600 - Exonic hg19 OV TCGA-20-1683-01A 37 17 In-Frame Intra-chr p21.31 p21.31 Tumor suppressor gene Seq+ 40248 ChimerSeq STARFusion TCGA_RNA-Seq GMEB2-ARFRP1 GMEB2 chr20 62250620 - ARFRP1 chr20 62333569 - Exonic hg19 OV TCGA-20-1683-01A 34 20 Out-of-frame Intra-chr q13.33 Transcription factor q13.33 40249 ChimerSeq STARFusion TCGA_RNA-Seq FCGRT-PRMT1 FCGRT chr19 50017743 + PRMT1 chr19 50183744 + Exonic hg19 OV TCGA-20-1683-01A 32 11 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 40250 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076852 + IGH@ chr14 106209410 - Exonic hg19 OV TCGA-20-1683-01A 33 0 Out-of-frame Inter-chr q21.2 32.33 40251 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076852 + IGHG1 chr14 106209410 - Exonic hg19 OV TCGA-20-1683-01A 33 0 Out-of-frame Inter-chr q21.2 q32.33 40252 ChimerSeq STARFusion TCGA_RNA-Seq WTIP-SCGB2B2 WTIP chr19 34986676 + SCGB2B2 chr19 35123545 - Exonic hg19 OV TCGA-20-1683-01A 23 20 CDS-5'UTR Intra-chr q13.11 q13.11 Seq+ 40253 ChimerSeq STARFusion TCGA_RNA-Seq ATF6-SDHC ATF6 chr1 161823113 + SDHC chr1 161332119 + Exonic hg19 OV TCGA-20-1683-01A 18 12 In-Frame Intra-chr q23.3 Transcription factor q23.3 Oncogene Seq+ 40254 ChimerSeq STARFusion TCGA_RNA-Seq SLX4IP-CEP89 SLX4IP chr20 10438879 + CEP89 chr19 33378747 - Exonic hg19 OV TCGA-20-1683-01A 15 3 Out-of-frame Inter-chr p12.2 q13.11 Seq+ 40255 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-ZNF597 CREBBP chr16 3900298 - ZNF597 chr16 3493206 - Exonic hg19 OV TCGA-20-1683-01A 14 6 CDS-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Transcription factor Seq+ 40256 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-20-1683-01A 13 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40257 ChimerSeq STARFusion TCGA_RNA-Seq BAG4-ZNF672 BAG4 chr8 38050313 + ZNF672 chr1 249138682 + Exonic hg19 OV TCGA-20-1683-01A 10 6 CDS-5'UTR Inter-chr p11.23 q44 Transcription factor Seq+ 40258 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1279-DDX50 KIAA1279 chr10 70765671 + DDX50 chr10 70693955 + Exonic hg19 OV TCGA-20-1683-01A 9 8 In-Frame Intra-chr q22.1 40259 ChimerSeq STARFusion TCGA_RNA-Seq NADK-C1orf222 NADK chr1 1709728 - C1orf222 chr1 1903521 - Exonic hg19 OV TCGA-20-1683-01A 10 3 Out-of-frame Intra-chr p36.33 Seq+ 40260 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-DCUN1D5 TMEM123 chr11 102319543 - DCUN1D5 chr11 102937296 - Exonic hg19 OV TCGA-20-1683-01A 8 8 Out-of-frame Intra-chr q22.2 q22.3 40261 ChimerSeq STARFusion TCGA_RNA-Seq ITPK1-BTBD7 ITPK1 chr14 93542940 - BTBD7 chr14 93720136 - Exonic hg19 OV TCGA-20-1683-01A 8 7 In-Frame Intra-chr Seq+ 40262 ChimerSeq STARFusion TCGA_RNA-Seq KCTD13-NPIPB11 KCTD13 chr16 29934511 - NPIPB11 chr16 29405397 - Exonic hg19 OV TCGA-20-1683-01A 7 7 Out-of-frame Intra-chr p11.2 p11.2 40263 ChimerSeq STARFusion TCGA_RNA-Seq ACVR1-NFATC1 ACVR1 chr2 158674897 - NFATC1 chr18 77246248 + Exonic hg19 OV TCGA-24-2281-01A 328 30 5'UTR-CDS Inter-chr q24.1 q23 Transcription factor Seq+ 40264 ChimerSeq STARFusion TCGA_RNA-Seq ZNF3-MCM7 ZNF3 chr7 99679258 - MCM7 chr7 99690756 - Exonic hg19 OV TCGA-24-2281-01A 163 75 5'UTR-CDS Intra-chr q22.1 Transcription factor q22.1 Seq+ 40265 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPL-RPS19BP1 HNRNPL chr19 39334482 - RPS19BP1 chr22 39925922 - Exonic hg19 OV TCGA-24-2281-01A 93 20 In-Frame Inter-chr q13.1 Seq+ 40266 ChimerSeq STARFusion TCGA_RNA-Seq RPRD1A-INO80C RPRD1A chr18 33647217 - INO80C chr18 33060527 - Exonic hg19 OV TCGA-24-2281-01A 68 8 Out-of-frame Intra-chr q12.2 q12.2 40267 ChimerSeq STARFusion TCGA_RNA-Seq TARDBP-ATAD3A TARDBP chr1 11072800 + ATAD3A chr1 1469306 + Exonic hg19 OV TCGA-24-2281-01A 36 1 5'UTR-CDS Intra-chr p36.22 p36.33 Seq+ 40268 ChimerSeq STARFusion TCGA_RNA-Seq HIBCH-DLX1 HIBCH chr2 191159272 - DLX1 chr2 172952731 + Exonic hg19 OV TCGA-24-2281-01A 34 3 In-Frame Intra-chr q32.2 q31.1 Transcription factor Seq+ 40269 ChimerSeq STARFusion TCGA_RNA-Seq LINC00669-PMS1 LINC00669 chr18 37331293 - PMS1 chr2 190728469 + Exonic hg19 OV TCGA-24-2281-01A 25 14 Out-of-frame Inter-chr q32.2 Oncogene 40270 ChimerSeq STARFusion TCGA_RNA-Seq COPS7B-PDE6D COPS7B chr2 232663674 + PDE6D chr2 232603912 - Exonic hg19 OV TCGA-24-2281-01A 28 1 Out-of-frame Intra-chr q37.1 q37.1 40271 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP42-HIBCH ARHGAP42 chr11 100665897 + HIBCH chr2 191077801 - Exonic hg19 OV TCGA-24-2281-01A 18 1 In-Frame Inter-chr q22.1 q32.2 Seq+ 40272 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPL-RPS19BP1 HNRNPL chr19 39332360 - RPS19BP1 chr22 39925985 - Exonic hg19 OV TCGA-24-2281-01A 13 20 Out-of-frame Inter-chr q13.1 Seq+ 40273 ChimerSeq STARFusion TCGA_RNA-Seq RPRD1A-INO80C RPRD1A chr18 33647217 - INO80C chr18 33048706 - Exonic hg19 OV TCGA-24-2281-01A 16 8 Out-of-frame Intra-chr q12.2 q12.2 40274 ChimerSeq STARFusion TCGA_RNA-Seq HIBCH-DLX1 HIBCH chr2 191161539 - DLX1 chr2 172952731 + Exonic hg19 OV TCGA-24-2281-01A 16 3 In-Frame Intra-chr q32.2 q31.1 Transcription factor Seq+ 40275 ChimerSeq STARFusion TCGA_RNA-Seq LINC00669-PMS1 LINC00669 chr18 37331293 - PMS1 chr2 190738222 + Exonic hg19 OV TCGA-24-2281-01A 9 14 Out-of-frame Inter-chr q32.2 Oncogene 40276 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-2281-01A 12 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40277 ChimerSeq STARFusion TCGA_RNA-Seq TARDBP-ATAD3A TARDBP chr1 11072800 + ATAD3A chr1 1444585 + Exonic hg19 OV TCGA-24-2281-01A 9 1 5'UTR-5'UTR Intra-chr p36.22 p36.33 Seq+ 40278 ChimerSeq STARFusion TCGA_RNA-Seq PARD3-ZNF521 PARD3 chr10 34805907 - ZNF521 chr18 22672045 - Exonic hg19 OV TCGA-24-1426-01A 113 17 In-Frame Inter-chr p11.21 q11.2 Oncogene Transcription factor Seq+ 40279 ChimerSeq STARFusion TCGA_RNA-Seq TNPO3-DYM TNPO3 chr7 128694705 - DYM chr18 46690157 - Exonic hg19 OV TCGA-24-1426-01A 57 11 Out-of-frame Inter-chr q32.1 q21.1 Seq+ 40280 ChimerSeq STARFusion TCGA_RNA-Seq FRAS1-MRPL1 FRAS1 chr4 78987170 + MRPL1 chr4 78870951 + Exonic hg19 OV TCGA-24-1426-01A 27 17 In-Frame Intra-chr q21.21 q21.1 Seq+ 40281 ChimerSeq STARFusion TCGA_RNA-Seq ADK-FAM149B1 ADK chr10 75936644 + FAM149B1 chr10 74987818 + Exonic hg19 OV TCGA-24-1426-01A 17 10 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 40282 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-24-1426-01A 18 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40283 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-1426-01A 13 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40284 ChimerSeq STARFusion TCGA_RNA-Seq ADK-FAM149B1 ADK chr10 75911101 + FAM149B1 chr10 74987818 + Exonic hg19 OV TCGA-24-1426-01A 9 9 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 40285 ChimerSeq STARFusion TCGA_RNA-Seq CBLC-PPP1R13L CBLC chr19 45287658 + PPP1R13L chr19 45901597 - Exonic hg19 OV TCGA-25-1320-01A 94 33 CDS-5'UTR Intra-chr q13.32 q13.32 Seq+ 40286 ChimerSeq STARFusion TCGA_RNA-Seq BCAT2-ZNF544 BCAT2 chr19 49302932 - ZNF544 chr19 58788549 + Exonic hg19 OV TCGA-25-1320-01A 41 14 3'UTR-3'UTR Intra-chr q13.33 q13.43 Transcription factor Seq+ 40287 ChimerSeq STARFusion TCGA_RNA-Seq PGAP3-PTPN12 PGAP3 chr17 37844087 - PTPN12 chr7 77227159 + Exonic hg19 OV TCGA-25-1320-01A 35 7 Out-of-frame Inter-chr q12 Oncogene q11.23 Tumor suppressor gene Seq+ 40288 ChimerSeq STARFusion TCGA_RNA-Seq ZNF235-DBP ZNF235 chr19 44807543 - DBP chr19 49134309 - Exonic hg19 OV TCGA-25-1320-01A 31 17 In-Frame Intra-chr q13.31 Transcription factor q13.33 Transcription factor Seq+ 40289 ChimerSeq STARFusion TCGA_RNA-Seq URI1-ZNF536 URI1 chr19 30496615 + ZNF536 chr19 31201664 + Exonic hg19 OV TCGA-25-1320-01A 29 0 CDS-3'UTR Intra-chr q12 q12 Transcription factor 40290 ChimerSeq STARFusion TCGA_RNA-Seq HCP5-PPP1R10 HCP5 chr6 31368558 + PPP1R10 chr6 30586407 - Exonic hg19 OV TCGA-25-1320-01A 27 7 Out-of-frame Intra-chr p21.33 40291 ChimerSeq STARFusion TCGA_RNA-Seq STAT5A-VAC14 STAT5A chr17 40461502 + VAC14 chr16 70726874 - Exonic hg19 OV TCGA-25-1320-01A 24 6 Out-of-frame Inter-chr q21.2 Tumor suppressor gene Transcription factor q22.2 Seq+ 40292 ChimerSeq STARFusion TCGA_RNA-Seq HCP5-PPP1R10 HCP5 chr6 31368540 + PPP1R10 chr6 30586405 - Exonic hg19 OV TCGA-25-1320-01A 18 7 Out-of-frame Intra-chr p21.33 40293 ChimerSeq STARFusion TCGA_RNA-Seq JMJD7-RTF1 JMJD7 chr15 42120386 + RTF1 chr15 41745099 + Exonic hg19 OV TCGA-25-1320-01A 16 14 Out-of-frame Intra-chr q15.1 q15.1 Seq+ 40294 ChimerSeq STARFusion TCGA_RNA-Seq PLA2G4B-RTF1 PLA2G4B chr15 42120386 + RTF1 chr15 41745099 + Exonic hg19 OV TCGA-25-1320-01A 16 14 5'UTR-CDS Intra-chr q15.1 q15.1 40295 ChimerSeq STARFusion TCGA_RNA-Seq BCAT2-ZNF544 BCAT2 chr19 49302936 - ZNF544 chr19 58788549 + Exonic hg19 OV TCGA-25-1320-01A 14 14 Out-of-frame Intra-chr q13.33 q13.43 Transcription factor Seq+ 40296 ChimerSeq STARFusion TCGA_RNA-Seq RNF169-LINC00301 RNF169 chr11 74500744 + LINC00301 chr11 60416641 + Exonic hg19 OV TCGA-25-1320-01A 16 6 CDS-5'UTR Intra-chr q13.4 q12.2 40297 ChimerSeq STARFusion TCGA_RNA-Seq C16orf70-MDFI C16orf70 chr16 67168370 + MDFI chr6 41617357 + Exonic hg19 OV TCGA-25-1320-01A 16 5 In-Frame Inter-chr q22.1 p21.1 Seq+ 40298 ChimerSeq STARFusion TCGA_RNA-Seq ZNF525-VAV1 ZNF525 chr19 53869012 + VAV1 chr19 6821802 + Exonic hg19 OV TCGA-25-1320-01A 16 0 5'UTR-CDS Intra-chr q13.42 Transcription factor p13.3 Seq+ 40299 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-25-1320-01A 15 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40300 ChimerSeq STARFusion TCGA_RNA-Seq SLC23A2-TEAD4 SLC23A2 chr20 4848416 - TEAD4 chr12 3147134 + Exonic hg19 OV TCGA-25-1320-01A 13 2 In-Frame Inter-chr p13 p13.33 Transcription factor Seq+ 40301 ChimerSeq STARFusion TCGA_RNA-Seq MICA-PPP1R10 MICA chr6 31371479 + PPP1R10 chr6 30586405 - Exonic hg19 OV TCGA-25-1320-01A 8 6 CDS-5'UTR Intra-chr p21.33 40302 ChimerSeq STARFusion TCGA_RNA-Seq UBE2D2-TMEM173 UBE2D2 chr5 138941400 + TMEM173 chr5 138862317 - Exonic hg19 OV TCGA-25-1320-01A 9 2 5'UTR-5'UTR Intra-chr q31.2 q31.2 40303 ChimerSeq STARFusion TCGA_RNA-Seq ZNF791-ETHE1 ZNF791 chr19 12721896 + ETHE1 chr19 44015718 - Exonic hg19 OV TCGA-24-1558-01A 287 228 In-Frame Intra-chr p13.13 Transcription factor q13.31 Seq+ 40304 ChimerSeq STARFusion TCGA_RNA-Seq ZNF20-DAND5 ZNF20 chr19 12250995 - DAND5 chr19 13084203 + Exonic hg19 OV TCGA-24-1558-01A 196 116 In-Frame Intra-chr p13.2 Transcription factor p13.13 Seq+ 40305 ChimerSeq STARFusion TCGA_RNA-Seq ZNF625-DAND5 ZNF625 chr19 12250995 - DAND5 chr19 13084203 + Exonic hg19 OV TCGA-24-1558-01A 157 115 3'UTR-CDS Intra-chr p13.2 Transcription factor p13.13 40306 ChimerSeq STARFusion TCGA_RNA-Seq ATF7IP2-STYXL1 ATF7IP2 chr16 10479979 + STYXL1 chr7 75634722 - Exonic hg19 OV TCGA-24-1558-01A 157 17 5'UTR-CDS Inter-chr p13.2 q11.23 Seq+ 40307 ChimerSeq STARFusion TCGA_RNA-Seq ZNF791-ETHE1 ZNF791 chr19 12725016 + ETHE1 chr19 44015718 - Exonic hg19 OV TCGA-24-1558-01A 84 228 Out-of-frame Intra-chr p13.13 Transcription factor q13.31 Seq+ 40308 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-KLHL32 ANKRD11 chr16 89556653 - KLHL32 chr6 97489368 + Exonic hg19 OV TCGA-24-1558-01A 88 50 5'UTR-CDS Inter-chr q24.3 q16.1 Seq+ 40309 ChimerSeq STARFusion TCGA_RNA-Seq URI1-XRCC1 URI1 chr19 30433571 + XRCC1 chr19 44065172 - Exonic hg19 OV TCGA-24-1558-01A 79 44 In-Frame Intra-chr q12 q13.31 Seq+ 40310 ChimerSeq STARFusion TCGA_RNA-Seq ZNF607-ARMC5 ZNF607 chr19 38198815 - ARMC5 chr16 31473243 + Exonic hg19 OV TCGA-24-1558-01A 79 26 In-Frame Inter-chr q13.12 Transcription factor p11.2 Tumor suppressor gene Seq+ 40311 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R37-PAFAH1B3 PPP1R37 chr19 45596785 + PAFAH1B3 chr19 42806477 - Exonic hg19 OV TCGA-24-1558-01A 54 23 CDS-5'UTR Intra-chr q13.32 q13.2 Seq+ 40312 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-HSH2D ZSWIM4 chr19 13941843 + HSH2D chr19 16254442 + Exonic hg19 OV TCGA-24-1558-01A 43 67 CDS-5'UTR Intra-chr p13.13 p13.11 Seq+ 40313 ChimerSeq STARFusion TCGA_RNA-Seq PLAUR-BABAM1 PLAUR chr19 44174218 - BABAM1 chr19 17378211 + Exonic hg19 OV TCGA-24-1558-01A 43 65 CDS-5'UTR Intra-chr q13.31 p13.11 Seq+ 40314 ChimerSeq STARFusion TCGA_RNA-Seq MTPAP-ALKBH3 MTPAP chr10 30611320 - ALKBH3 chr11 43940588 + Exonic hg19 OV TCGA-24-1558-01A 38 22 Out-of-frame Inter-chr p11.23 p11.2 Seq+ 40315 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-HSH2D ZSWIM4 chr19 13941821 + HSH2D chr19 16254443 + Exonic hg19 OV TCGA-24-1558-01A 24 67 Out-of-frame Intra-chr p13.13 p13.11 Seq+ 40316 ChimerSeq STARFusion TCGA_RNA-Seq ATF7IP2-STYXL1 ATF7IP2 chr16 10479979 + STYXL1 chr7 75643205 - Exonic hg19 OV TCGA-24-1558-01A 34 17 5'UTR-CDS Inter-chr p13.2 q11.23 Seq+ 40317 ChimerSeq STARFusion TCGA_RNA-Seq ALDH9A1-TMCO1 ALDH9A1 chr1 165667487 - TMCO1 chr1 165697358 - Exonic hg19 OV TCGA-24-1558-01A 35 10 CDS-3'UTR Intra-chr q24.1 q24.1 Seq+ 40318 ChimerSeq STARFusion TCGA_RNA-Seq ZNF20-NFIX ZNF20 chr19 12250995 - NFIX chr19 13135835 + Exonic hg19 OV TCGA-24-1558-01A 30 22 In-Frame Intra-chr p13.2 Transcription factor p13.13 Transcription factor Seq+ 40319 ChimerSeq STARFusion TCGA_RNA-Seq PLD3-CD79A PLD3 chr19 40873786 + CD79A chr19 42383060 + Exonic hg19 OV TCGA-24-1558-01A 27 29 Out-of-frame Intra-chr q13.2 q13.2 Oncogene Seq+ 40320 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-ZNF540 ZSWIM4 chr19 13915962 + ZNF540 chr19 38089277 + Exonic hg19 OV TCGA-24-1558-01A 26 21 CDS-5'UTR Intra-chr p13.13 q13.12 Transcription factor Seq+ 40321 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-HSH2D ZSWIM4 chr19 13942114 + HSH2D chr19 16254442 + Exonic hg19 OV TCGA-24-1558-01A 13 67 3'UTR-5'UTR Intra-chr p13.13 p13.11 Seq+ 40322 ChimerSeq STARFusion TCGA_RNA-Seq HIP1-STYXL1 HIP1 chr7 75368119 - STYXL1 chr7 75634722 - Exonic hg19 OV TCGA-24-1558-01A 23 14 In-Frame Intra-chr q11.23 q11.23 Seq+ 40323 ChimerSeq STARFusion TCGA_RNA-Seq ZNF625-NFIX ZNF625 chr19 12250995 - NFIX chr19 13135835 + Exonic hg19 OV TCGA-24-1558-01A 20 22 3'UTR-CDS Intra-chr p13.2 Transcription factor p13.13 Transcription factor 40324 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-HSH2D ZSWIM4 chr19 13942095 + HSH2D chr19 16254442 + Exonic hg19 OV TCGA-24-1558-01A 7 67 3'UTR-5'UTR Intra-chr p13.13 p13.11 Seq+ 40325 ChimerSeq STARFusion TCGA_RNA-Seq PI4KAP1-IGL@ PI4KAP1 chr22 20397113 - IGL@ chr22 23029445 + Exonic hg19 OV TCGA-24-1558-01A 14 9 Out-of-frame Intra-chr q11.21 q11.22 40326 ChimerSeq STARFusion TCGA_RNA-Seq ZNF709-CD177 ZNF709 chr19 12624558 - CD177 chr19 43858359 + Exonic hg19 OV TCGA-24-1558-01A 6 28 5'UTR-CDS Intra-chr p13.2 Transcription factor q13.31 Seq+ 40327 ChimerSeq STARFusion TCGA_RNA-Seq ZNF709-CD177 ZNF709 chr19 12624558 - CD177 chr19 43858005 + Exonic hg19 OV TCGA-24-1558-01A 6 28 5'UTR-CDS Intra-chr p13.2 Transcription factor q13.31 Seq+ 40328 ChimerSeq STARFusion TCGA_RNA-Seq LINC00665-ITGAM LINC00665 chr19 36821155 - ITGAM chr16 31273013 + Exonic hg19 OV TCGA-24-1558-01A 11 6 Out-of-frame Inter-chr q13.12 p11.2 40329 ChimerSeq STARFusion TCGA_RNA-Seq PI4KAP1-IGL@ PI4KAP1 chr22 20397113 - IGL@ chr22 23154478 + Exonic hg19 OV TCGA-24-1558-01A 9 9 Out-of-frame Intra-chr q11.21 q11.22 40330 ChimerSeq STARFusion TCGA_RNA-Seq ALDH9A1-TMCO1 ALDH9A1 chr1 165667615 - TMCO1 chr1 165697358 - Exonic hg19 OV TCGA-24-1558-01A 8 10 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 40331 ChimerSeq STARFusion TCGA_RNA-Seq PLD3-CD79A PLD3 chr19 40872822 + CD79A chr19 42383060 + Exonic hg19 OV TCGA-24-1558-01A 3 29 Out-of-frame Intra-chr q13.2 q13.2 Oncogene Seq+ 40332 ChimerSeq STARFusion TCGA_RNA-Seq STAG1-MSL2 STAG1 chr3 136471037 - MSL2 chr3 135871580 - Exonic hg19 OV TCGA-24-1558-01A 9 3 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 40333 ChimerSeq STARFusion TCGA_RNA-Seq HAUS8-ZNF846 HAUS8 chr19 17166671 - ZNF846 chr19 9872844 - Exonic hg19 OV TCGA-24-1558-01A 6 11 In-Frame Intra-chr p13.11 p13.2 Transcription factor Seq+ 40334 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-ZNF540 ZSWIM4 chr19 13915962 + ZNF540 chr19 38089080 + Exonic hg19 OV TCGA-24-1558-01A 3 20 CDS-5'UTR Intra-chr p13.13 q13.12 Transcription factor Seq+ 40335 ChimerSeq STARFusion TCGA_RNA-Seq HAUS8-ZNF846 HAUS8 chr19 17166671 - ZNF846 chr19 9872841 - Exonic hg19 OV TCGA-24-1558-01A 3 11 In-Frame Intra-chr p13.11 p13.2 Transcription factor Seq+ 40336 ChimerSeq STARFusion TCGA_RNA-Seq PI4KAP1-IGL@ PI4KAP1 chr22 20397878 - IGL@ chr22 23090108 + Exonic hg19 OV TCGA-24-1558-01A 3 9 Out-of-frame Intra-chr q11.21 q11.22 40337 ChimerSeq STARFusion TCGA_RNA-Seq PPFIBP1-NHP2L1 PPFIBP1 chr12 27803074 + NHP2L1 chr22 42076368 - Exonic hg19 OV TCGA-04-1536-01A 24 7 In-Frame Inter-chr p11.23 40338 ChimerSeq STARFusion TCGA_RNA-Seq DIAPH1-RASA3 DIAPH1 chr5 140894621 - RASA3 chr13 114843474 - Exonic hg19 OV TCGA-04-1536-01A 12 0 Out-of-frame Inter-chr q31.3 40339 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K1-GPBP1 MAP3K1 chr5 56111882 + GPBP1 chr5 56509901 + Exonic hg19 OV TCGA-04-1536-01A 5 3 CDS-5'UTR Intra-chr q11.2 STE:STE11 Oncogene q11.2 Transcription factor 40340 ChimerSeq STARFusion TCGA_RNA-Seq PAK4-LSM4 PAK4 chr19 39616559 + LSM4 chr19 18426875 - Exonic hg19 OV TCGA-10-0927-01A 20 51 5'UTR-CDS Intra-chr q13.2 STE:STE20 p13.11 Seq+ 40341 ChimerSeq STARFusion TCGA_RNA-Seq EXTL3-PNOC EXTL3 chr8 28480327 + PNOC chr8 28186652 + Exonic hg19 OV TCGA-10-0927-01A 28 4 5'UTR-5'UTR Intra-chr p21.1 Tumor suppressor gene p21.1 Seq+ 40342 ChimerSeq STARFusion TCGA_RNA-Seq PAK4-LSM4 PAK4 chr19 39616559 + LSM4 chr19 18433920 - Exonic hg19 OV TCGA-10-0927-01A 3 50 5'UTR-5'UTR Intra-chr q13.2 STE:STE20 p13.11 Seq+ 40343 ChimerSeq STARFusion TCGA_RNA-Seq PAK4-LSM4 PAK4 chr19 39616559 + LSM4 chr19 18423512 - Exonic hg19 OV TCGA-10-0927-01A 2 50 5'UTR-CDS Intra-chr q13.2 STE:STE20 p13.11 Seq+ 40344 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-10-0927-01A 10 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40345 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF6-POU4F3 RAPGEF6 chr5 130970655 - POU4F3 chr5 145718666 + Exonic hg19 OV TCGA-10-0927-01A 9 3 CDS-5'UTR Intra-chr q31.1 q32 Transcription factor Seq+ 40346 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF6-RBM27 RAPGEF6 chr5 130970655 - RBM27 chr5 145718666 + Exonic hg19 OV TCGA-10-0927-01A 9 3 CDS-3'UTR Intra-chr q31.1 q32 40347 ChimerSeq STARFusion TCGA_RNA-Seq PLD3-C19orf47 PLD3 chr19 40854675 + C19orf47 chr19 40847797 - Exonic hg19 OV TCGA-10-0927-01A 5 2 5'UTR-5'UTR Intra-chr q13.2 q13.2 40348 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-61-2104-01A 39 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40349 ChimerSeq STARFusion TCGA_RNA-Seq SPEN-TMEM51 SPEN chr1 16203173 + TMEM51 chr1 15536986 + Exonic hg19 OV TCGA-61-2104-01A 20 16 CDS-5'UTR Intra-chr p36.21 Transcription factor p36.21 Seq+ 40350 ChimerSeq STARFusion TCGA_RNA-Seq SPEN-TMEM51 SPEN chr1 16203173 + TMEM51 chr1 15541391 + Exonic hg19 OV TCGA-61-2104-01A 17 16 CDS-5'UTR Intra-chr p36.21 Transcription factor p36.21 Seq+ 40351 ChimerSeq STARFusion TCGA_RNA-Seq THRAP3-INSL5 THRAP3 chr1 36690106 + INSL5 chr1 67266849 - Exonic hg19 OV TCGA-61-2104-01A 17 5 5'UTR-CDS Intra-chr p34.3 p31.3 Seq+ 40352 ChimerSeq STARFusion TCGA_RNA-Seq MACROD1-TBC1D22A MACROD1 chr11 63918711 - TBC1D22A chr22 47274549 + Exonic hg19 OV TCGA-61-2104-01A 15 3 In-Frame Inter-chr q13.1 q13.31 Seq+ 40353 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734947 - CCDC85C chr14 100069804 - Exonic hg19 OV TCGA-61-2104-01A 14 0 Out-of-frame Inter-chr q12.3 q32.2 40354 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-61-2104-01A 12 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40355 ChimerSeq STARFusion TCGA_RNA-Seq TBCD-FN3K TBCD chr17 80710204 + FN3K chr17 80698718 + Exonic hg19 OV TCGA-61-2104-01A 10 2 Out-of-frame Intra-chr q25.3 Seq+ 40356 ChimerSeq STARFusion TCGA_RNA-Seq FBXO31-TTC28 FBXO31 chr16 87393901 - TTC28 chr22 28559587 - Exonic hg19 OV TCGA-61-2104-01A 9 4 Out-of-frame Inter-chr q24.2 Tumor suppressor gene q12.1 Seq+ 40357 ChimerSeq STARFusion TCGA_RNA-Seq SGSM3-PLAUR SGSM3 chr22 40766692 + PLAUR chr19 44160792 - Exonic hg19 OV TCGA-61-2104-01A 10 0 5'UTR-CDS Inter-chr q13.1 q13.31 Seq+ 40358 ChimerSeq STARFusion TCGA_RNA-Seq SPEN-TMEM51 SPEN chr1 16199631 + TMEM51 chr1 15541391 + Exonic hg19 OV TCGA-61-2104-01A 5 16 CDS-5'UTR Intra-chr p36.21 Transcription factor p36.21 Seq+ 40359 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5P1-PPAP2B SLC7A5P1 chr16 29624424 - PPAP2B chr1 57002784 - Exonic hg19 OV TCGA-61-2104-01A 8 2 3'UTR-CDS Inter-chr p11.2 40360 ChimerSeq STARFusion TCGA_RNA-Seq SPEN-TMEM51 SPEN chr1 16199631 + TMEM51 chr1 15536986 + Exonic hg19 OV TCGA-61-2104-01A 2 16 CDS-5'UTR Intra-chr p36.21 Transcription factor p36.21 Seq+ 40361 ChimerSeq STARFusion TCGA_RNA-Seq VCL-ADK VCL chr10 75868914 + ADK chr10 76349040 + Exonic hg19 OV TCGA-24-2254-01A 159 81 In-Frame Intra-chr q22.2 q22.2 Seq+ 40362 ChimerSeq STARFusion TCGA_RNA-Seq FSD1L-SLC44A1 FSD1L chr9 108210516 + SLC44A1 chr9 108200562 + Exonic hg19 OV TCGA-24-2254-01A 16 11 CDS-3'UTR Intra-chr q31.2 q31.1 40363 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-61-2097-01A 23 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40364 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821631 - Exonic hg19 OV TCGA-61-2097-01A 9 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40365 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-61-2097-01A 6 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40366 ChimerSeq STARFusion TCGA_RNA-Seq FXR1-ST6GAL1 FXR1 chr3 180630524 + ST6GAL1 chr3 186756530 + Exonic hg19 OV TCGA-61-2016-01A 53 0 5'UTR-5'UTR Intra-chr q26.33 q27.3 Seq+ 40367 ChimerSeq STARFusion TCGA_RNA-Seq MLLT4-TCP10 MLLT4 chr6 168227917 + TCP10 chr6 167791580 - Exonic hg19 OV TCGA-61-2016-01A 31 1 In-Frame Intra-chr q27 Seq+ 40368 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-61-2016-01A 15 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40369 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069803 - Exonic hg19 OV TCGA-25-2404-01A 38 0 Out-of-frame Inter-chr q12.3 q32.2 40370 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-25-2404-01A 20 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40371 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821633 - Exonic hg19 OV TCGA-24-1416-01A 26 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40372 ChimerSeq STARFusion TCGA_RNA-Seq RAB34-NUFIP2 RAB34 chr17 27044231 - NUFIP2 chr17 27594548 - Exonic hg19 OV TCGA-24-1416-01A 10 1 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 40373 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-24-1416-01A 9 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40374 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-24-1416-01A 8 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40375 ChimerSeq STARFusion TCGA_RNA-Seq TMEM87B-MERTK TMEM87B chr2 112821830 + MERTK chr2 112776990 + Exonic hg19 OV TCGA-61-1725-01A 26 0 In-Frame Intra-chr q13 q13 Seq+ 40376 ChimerSeq STARFusion TCGA_RNA-Seq VPS4A-SNTB2 VPS4A chr16 69345435 + SNTB2 chr16 69317951 + Exonic hg19 OV TCGA-61-1725-01A 19 0 Out-of-frame Intra-chr q22.1 40377 ChimerSeq STARFusion TCGA_RNA-Seq LYN-RGS20 LYN chr8 56792662 + RGS20 chr8 54852136 + Exonic hg19 OV TCGA-61-1725-01A 8 0 5'UTR-CDS Intra-chr q12.1 TK:Src q11.23 40378 ChimerSeq STARFusion TCGA_RNA-Seq AKAP9-CDK14 AKAP9 chr7 91570461 + CDK14 chr7 90419888 + Exonic hg19 OV TCGA-61-1725-01A 7 0 Out-of-frame Intra-chr q21.2 Oncogene q21.13 Seq+ 40379 ChimerSeq STARFusion TCGA_RNA-Seq VPS37C-AHNAK VPS37C chr11 60928863 - AHNAK chr11 62259303 - Exonic hg19 OV TCGA-13-0920-01A 17 2 5'UTR-CDS Intra-chr q12.2 q12.3 Tumor suppressor gene Seq+ 40380 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-IFI6 WASF2 chr1 27816497 - IFI6 chr1 27995857 - Exonic hg19 OV TCGA-13-0920-01A 16 1 5'UTR-5'UTR Intra-chr p36.11 p35.3 Seq+ 40381 ChimerSeq STARFusion TCGA_RNA-Seq ZNF341-PXMP4 ZNF341 chr20 32319858 + PXMP4 chr20 32308216 - Exonic hg19 OV TCGA-13-0920-01A 11 0 CDS-5'UTR Intra-chr q11.22 Transcription factor q11.22 40382 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L5-PTPN4 EPB41L5 chr2 120836157 + PTPN4 chr2 120672755 + Exonic hg19 OV TCGA-13-0920-01A 10 2 In-Frame Intra-chr q14.2 q14.2 40383 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-DHX30 TBL1XR1 chr3 176914909 - DHX30 chr3 47846816 + Exonic hg19 OV TCGA-13-0920-01A 7 11 5'UTR-5'UTR Intra-chr q26.32 p21.31 Seq+ 40384 ChimerSeq STARFusion TCGA_RNA-Seq DTD1-TTC29 DTD1 chr20 18608877 + TTC29 chr4 147628703 - Exonic hg19 OV TCGA-13-0920-01A 9 2 Out-of-frame Inter-chr p11.23 q31.22 Seq+ 40385 ChimerSeq STARFusion TCGA_RNA-Seq ASXL1-TM9SF4 ASXL1 chr20 30956926 + TM9SF4 chr20 30720816 + Exonic hg19 OV TCGA-13-1410-01A 78 24 In-Frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 40386 ChimerSeq STARFusion TCGA_RNA-Seq SUPT5H-CALR3 SUPT5H chr19 39936605 + CALR3 chr19 16601381 - Exonic hg19 OV TCGA-13-1410-01A 37 21 Out-of-frame Intra-chr q13.2 p13.11 Seq+ 40387 ChimerSeq STARFusion TCGA_RNA-Seq RCOR1-PPP2R5C RCOR1 chr14 103059662 + PPP2R5C chr14 102391478 + Exonic hg19 OV TCGA-13-1410-01A 37 20 Out-of-frame Intra-chr q32.31 q32.31 Tumor suppressor gene Seq+ 40388 ChimerSeq STARFusion TCGA_RNA-Seq MAP2K2-INSR MAP2K2 chr19 4110507 - INSR chr19 7132328 - Exonic hg19 OV TCGA-13-1410-01A 35 18 In-Frame Intra-chr p13.3 STE:STE7 Oncogene p13.2 TK:InsR Seq+ 40389 ChimerSeq STARFusion TCGA_RNA-Seq SUPT5H-CALR3 SUPT5H chr19 39936605 + CALR3 chr19 16594926 - Exonic hg19 OV TCGA-13-1410-01A 17 21 In-Frame Intra-chr q13.2 p13.11 Seq+ 40390 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-13-1410-01A 19 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40391 ChimerSeq STARFusion TCGA_RNA-Seq URI1-ZNF536 URI1 chr19 30477324 + ZNF536 chr19 30843275 + Exonic hg19 OV TCGA-13-1410-01A 16 12 5'UTR-5'UTR Intra-chr q12 q12 Transcription factor 40392 ChimerSeq STARFusion TCGA_RNA-Seq URI1-ZNF536 URI1 chr19 30477324 + ZNF536 chr19 30934468 + Exonic hg19 OV TCGA-13-1410-01A 14 12 5'UTR-5'UTR Intra-chr q12 q12 Transcription factor 40393 ChimerSeq STARFusion TCGA_RNA-Seq ZNF283-CYP2A6 ZNF283 chr19 44335533 + CYP2A6 chr19 41356385 - Exonic hg19 OV TCGA-13-1410-01A 11 9 5'UTR-5'UTR Intra-chr q13.31 Transcription factor q13.2 40394 ChimerSeq STARFusion TCGA_RNA-Seq TTLL9-HM13 TTLL9 chr20 30467700 + HM13 chr20 30125982 + Exonic hg19 OV TCGA-13-1410-01A 11 5 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 40395 ChimerSeq STARFusion TCGA_RNA-Seq MVB12A-NWD1 MVB12A chr19 17524114 + NWD1 chr19 16910697 + Exonic hg19 OV TCGA-13-1410-01A 9 9 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 40396 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-13-1410-01A 11 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40397 ChimerSeq STARFusion TCGA_RNA-Seq MVB12A-NWD1 MVB12A chr19 17517105 + NWD1 chr19 16918397 + Exonic hg19 OV TCGA-13-1410-01A 6 9 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 40398 ChimerSeq STARFusion TCGA_RNA-Seq MVB12A-NWD1 MVB12A chr19 17517105 + NWD1 chr19 16910697 + Exonic hg19 OV TCGA-13-1410-01A 6 8 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 40399 ChimerSeq STARFusion TCGA_RNA-Seq URI1-ZNF536 URI1 chr19 30433571 + ZNF536 chr19 30934468 + Exonic hg19 OV TCGA-13-1410-01A 4 12 5'UTR-5'UTR Intra-chr q12 q12 Transcription factor 40400 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-29-1770-02A 38 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40401 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-29-1770-02A 18 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40402 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-29-1770-02A 17 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40403 ChimerSeq STARFusion TCGA_RNA-Seq PSMA6-SRP54 PSMA6 chr14 35761758 + SRP54 chr14 35476489 + Exonic hg19 OV TCGA-29-1770-02A 15 1 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 40404 ChimerSeq STARFusion TCGA_RNA-Seq SSRP1-MED19 SSRP1 chr11 57101937 - MED19 chr11 57472701 - Exonic hg19 OV TCGA-24-1560-01A 46 6 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 40405 ChimerSeq STARFusion TCGA_RNA-Seq GLYR1-SRL GLYR1 chr16 4895075 - SRL chr16 4245787 - Exonic hg19 OV TCGA-24-1560-01A 13 5 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 40406 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-LSAMP ZBTB20 chr3 114519948 - LSAMP chr3 115571464 - Exonic hg19 OV TCGA-24-1560-01A 11 1 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.31 Tumor suppressor gene Seq+ 40407 ChimerSeq STARFusion TCGA_RNA-Seq SORL1-TBCEL SORL1 chr11 121498476 + TBCEL chr11 120957487 + Exonic hg19 OV TCGA-24-1560-01A 7 5 Out-of-frame Intra-chr q24.1 q23.3 Seq+ 40408 ChimerSeq STARFusion TCGA_RNA-Seq GLYR1-SRL GLYR1 chr16 4893405 - SRL chr16 4245787 - Exonic hg19 OV TCGA-24-1560-01A 6 5 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 40409 ChimerSeq STARFusion TCGA_RNA-Seq SORL1-TBCEL SORL1 chr11 121500302 + TBCEL chr11 120957487 + Exonic hg19 OV TCGA-24-1560-01A 6 5 3'UTR-CDS Intra-chr q24.1 q23.3 Seq+ 40410 ChimerSeq STARFusion TCGA_RNA-Seq SH3BP5-METTL6 SH3BP5 chr3 15372011 - METTL6 chr3 15425694 - Exonic hg19 OV TCGA-25-2397-01A 414 180 CDS-3'UTR Intra-chr p25.1 p25.1 Seq+ 40411 ChimerSeq STARFusion TCGA_RNA-Seq AHNAK-MACROD1 AHNAK chr11 62286437 - MACROD1 chr11 63767767 - Exonic hg19 OV TCGA-25-2397-01A 274 64 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q13.1 Seq+ 40412 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2B-NUP155 PRRC2B chr9 134269650 + NUP155 chr5 37293087 - Exonic hg19 OV TCGA-25-2397-01A 251 38 5'UTR-CDS Inter-chr q34.13 p13.2 Seq+ 40413 ChimerSeq STARFusion TCGA_RNA-Seq SH3BP5-METTL6 SH3BP5 chr3 15372011 - METTL6 chr3 15426080 - Exonic hg19 OV TCGA-25-2397-01A 106 162 CDS-3'UTR Intra-chr p25.1 p25.1 Seq+ 40414 ChimerSeq STARFusion TCGA_RNA-Seq PLXNB1-COL7A1 PLXNB1 chr3 48454606 - COL7A1 chr3 48625365 - Exonic hg19 OV TCGA-25-2397-01A 53 27 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 40415 ChimerSeq STARFusion TCGA_RNA-Seq PLXNB1-COL7A1 PLXNB1 chr3 48454612 - COL7A1 chr3 48625371 - Exonic hg19 OV TCGA-25-2397-01A 52 27 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 40416 ChimerSeq STARFusion TCGA_RNA-Seq PPP1CB-SSPN PPP1CB chr2 29001905 + SSPN chr12 26332929 + Exonic hg19 OV TCGA-25-2397-01A 30 16 CDS-5'UTR Inter-chr p23.2 p12.1 Seq+ 40417 ChimerSeq STARFusion TCGA_RNA-Seq CRTC3-IQGAP1 CRTC3 chr15 91083369 + IQGAP1 chr15 91037945 + Exonic hg19 OV TCGA-25-2397-01A 30 15 Out-of-frame Intra-chr q26.1 q26.1 Seq+ 40418 ChimerSeq STARFusion TCGA_RNA-Seq PRC1-VPS33B PRC1 chr15 91527923 - VPS33B chr15 91561115 - Exonic hg19 OV TCGA-25-2397-01A 17 5 In-Frame Intra-chr q26.1 q26.1 Seq+ 40419 ChimerSeq STARFusion TCGA_RNA-Seq PLXNB1-COL7A1 PLXNB1 chr3 48455079 - COL7A1 chr3 48625364 - Exonic hg19 OV TCGA-25-2397-01A 11 27 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 40420 ChimerSeq STARFusion TCGA_RNA-Seq PLXNB1-COL7A1 PLXNB1 chr3 48455079 - COL7A1 chr3 48625358 - Exonic hg19 OV TCGA-25-2397-01A 8 27 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 40421 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R13B-C14orf2 PPP1R13B chr14 104313636 - C14orf2 chr14 104381526 - Exonic hg19 OV TCGA-25-2397-01A 14 3 In-Frame Intra-chr q32.33 q32.33 Seq+ 40422 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-PITPNC1 SLC39A11 chr17 71027695 - PITPNC1 chr17 65528918 + Exonic hg19 OV TCGA-25-2397-01A 12 0 In-Frame Intra-chr q25.1 q24.2 Seq+ 40423 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-MMP20 TMEM123 chr11 102319543 - MMP20 chr11 102449873 - Exonic hg19 OV TCGA-25-2397-01A 9 1 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 40424 ChimerSeq STARFusion TCGA_RNA-Seq NR6A1-GOLGA1 NR6A1 chr9 127495587 - GOLGA1 chr9 127652757 - Exonic hg19 OV TCGA-25-2397-01A 9 0 Out-of-frame Intra-chr q33.3 Transcription factor q33.3 Seq+ 40425 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734942 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-25-2397-01A 7 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40426 ChimerSeq STARFusion TCGA_RNA-Seq PPP1CB-SSPN PPP1CB chr2 29001905 + SSPN chr12 26377226 + Exonic hg19 OV TCGA-25-2397-01A 3 16 Out-of-frame Inter-chr p23.2 p12.1 Seq+ 40427 ChimerSeq STARFusion TCGA_RNA-Seq HTT-ZFYVE28 HTT chr4 3184197 + ZFYVE28 chr4 2344930 - Exonic hg19 OV TCGA-23-1109-01A 32 8 CDS-5'UTR Intra-chr p16.3 p16.3 Seq+ 40428 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-23-1109-01A 25 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40429 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-23-1109-01A 12 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40430 ChimerSeq STARFusion TCGA_RNA-Seq TPSAB1-PRSS27 TPSAB1 chr16 1291991 + PRSS27 chr16 2762815 - Exonic hg19 OV TCGA-23-1109-01A 11 0 In-Frame Intra-chr p13.3 p13.3 40431 ChimerSeq STARFusion TCGA_RNA-Seq HTT-ZFYVE28 HTT chr4 3184197 + ZFYVE28 chr4 2343342 - Exonic hg19 OV TCGA-23-1109-01A 8 8 In-Frame Intra-chr p16.3 p16.3 Seq+ 40432 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-23-1109-01A 8 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40433 ChimerSeq STARFusion TCGA_RNA-Seq NSMCE2-PBX3 NSMCE2 chr8 126194498 + PBX3 chr9 128677965 + Exonic hg19 OV TCGA-24-1567-01A 11 3 In-Frame Inter-chr q24.13 q33.3 Transcription factor Seq+ 40434 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-TRAP1 CREBBP chr16 3929833 - TRAP1 chr16 3740986 - Exonic hg19 OV TCGA-31-1959-01A 271 42 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 40435 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-MIPEP TBL1XR1 chr3 176914909 - MIPEP chr13 24330757 - Exonic hg19 OV TCGA-31-1959-01A 149 43 5'UTR-CDS Inter-chr q26.32 q12.12 Seq+ 40436 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-MIPEP TBL1XR1 chr3 176914128 - MIPEP chr13 24330757 - Exonic hg19 OV TCGA-31-1959-01A 28 42 5'UTR-CDS Inter-chr q26.32 q12.12 Seq+ 40437 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-MIPEP TBL1XR1 chr3 176914909 - MIPEP chr13 24304584 - Exonic hg19 OV TCGA-31-1959-01A 21 42 5'UTR-CDS Inter-chr q26.32 q12.12 Seq+ 40438 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-MIPEP TBL1XR1 chr3 176878659 - MIPEP chr13 24330757 - Exonic hg19 OV TCGA-31-1959-01A 20 42 5'UTR-CDS Inter-chr q26.32 q12.12 Seq+ 40439 ChimerSeq STARFusion TCGA_RNA-Seq DICER1-UVRAG DICER1 chr14 95623567 - UVRAG chr11 75826968 + Exonic hg19 OV TCGA-31-1959-01A 26 3 5'UTR-CDS Inter-chr q32.13 Oncogene Tumor suppressor gene q13.5 Tumor suppressor gene Seq+ 40440 ChimerSeq STARFusion TCGA_RNA-Seq NFKBID-TYROBP NFKBID chr19 36386882 - TYROBP chr19 36395536 - Exonic hg19 OV TCGA-31-1959-01A 12 3 In-Frame Intra-chr q13.12 q13.12 Seq+ 40441 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-31-1959-01A 10 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40442 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-31-1959-01A 10 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40443 ChimerSeq STARFusion TCGA_RNA-Seq HPS3-CPB1 HPS3 chr3 148847727 + CPB1 chr3 148575244 + Exonic hg19 OV TCGA-13-1495-01A 303 103 Out-of-frame Intra-chr q24 q24 Seq+ 40444 ChimerSeq STARFusion TCGA_RNA-Seq ATP13A3-TMEM14B ATP13A3 chr3 194206523 - TMEM14B chr6 10829240 + Exonic hg19 OV TCGA-13-1495-01A 133 41 Out-of-frame Inter-chr q29 p24.2 Seq+ 40445 ChimerSeq STARFusion TCGA_RNA-Seq KAT6B-ADK KAT6B chr10 76603236 + ADK chr10 76468079 + Exonic hg19 OV TCGA-13-1495-01A 88 35 Out-of-frame Intra-chr Oncogene q22.2 Seq+ 40446 ChimerSeq STARFusion TCGA_RNA-Seq PRPSAP1-SRSF2 PRPSAP1 chr17 74344610 - SRSF2 chr17 74731240 - Exonic hg19 OV TCGA-13-1495-01A 52 17 CDS-3'UTR Intra-chr q25.1 q25.1 Oncogene Seq+ 40447 ChimerSeq STARFusion TCGA_RNA-Seq ATP13A3-TMEM14B ATP13A3 chr3 194206523 - TMEM14B chr6 10827930 + Exonic hg19 OV TCGA-13-1495-01A 33 41 Out-of-frame Inter-chr q29 p24.2 Seq+ 40448 ChimerSeq STARFusion TCGA_RNA-Seq FAM195A-RAB11FIP3 FAM195A chr16 692249 + RAB11FIP3 chr16 532525 + Exonic hg19 OV TCGA-13-1495-01A 33 14 Out-of-frame Intra-chr Seq+ 40449 ChimerSeq STARFusion TCGA_RNA-Seq RNF13-TM4SF4 RNF13 chr3 149531140 + TM4SF4 chr3 149192762 + Exonic hg19 OV TCGA-13-1495-01A 11 11 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 40450 ChimerSeq STARFusion TCGA_RNA-Seq CFLAR-AOX2P CFLAR chr2 201997857 + AOX2P chr2 201645370 + Exonic hg19 OV TCGA-13-1495-01A 12 0 CDS-5'UTR Intra-chr q33.1 q33.1 40451 ChimerSeq STARFusion TCGA_RNA-Seq CFLAR-AOX2P CFLAR chr2 201997857 + AOX2P chr2 201642472 + Exonic hg19 OV TCGA-13-1495-01A 10 0 CDS-5'UTR Intra-chr q33.1 q33.1 40452 ChimerSeq STARFusion TCGA_RNA-Seq DIAPH1-RASA3 DIAPH1 chr5 140894621 - RASA3 chr13 114843474 - Exonic hg19 OV TCGA-13-1495-01A 10 0 Out-of-frame Inter-chr q31.3 40453 ChimerSeq STARFusion TCGA_RNA-Seq CTXN1-BLVRB CTXN1 chr19 7990852 - BLVRB chr19 40964452 - Exonic hg19 OV TCGA-13-1495-01A 9 1 5'UTR-CDS Intra-chr p13.2 q13.2 Seq+ 40454 ChimerSeq STARFusion TCGA_RNA-Seq YARS2-PKP2 YARS2 chr12 32906852 - PKP2 chr12 33047712 - Exonic hg19 OV TCGA-13-1495-01A 6 4 Out-of-frame Intra-chr p11.21 p11.21 40455 ChimerSeq STARFusion TCGA_RNA-Seq RNF13-TM4SF4 RNF13 chr3 149531140 + TM4SF4 chr3 149205406 + Exonic hg19 OV TCGA-13-1495-01A 4 11 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 40456 ChimerSeq STARFusion TCGA_RNA-Seq ZMPSTE24-RNF220 ZMPSTE24 chr1 40734207 + RNF220 chr1 44884976 + Exonic hg19 OV TCGA-25-1628-01A 80 30 Out-of-frame Intra-chr p34.2 p34.1 Seq+ 40457 ChimerSeq STARFusion TCGA_RNA-Seq COL14A1-DEPTOR COL14A1 chr8 121180486 + DEPTOR chr8 121013764 + Exonic hg19 OV TCGA-29-1695-01A 156 32 In-Frame Intra-chr q24.12 q24.12 Seq+ 40458 ChimerSeq STARFusion TCGA_RNA-Seq CSF1-GSTM5 CSF1 chr1 110467824 + GSTM5 chr1 110317694 + Exonic hg19 OV TCGA-29-1695-01A 72 7 3'UTR-3'UTR Intra-chr p13.3 p13.3 Seq+ 40459 ChimerSeq STARFusion TCGA_RNA-Seq LRIG1-PPM1L LRIG1 chr3 66550614 - PPM1L chr3 160679524 + Exonic hg19 OV TCGA-29-1695-01A 16 4 Out-of-frame Intra-chr Tumor suppressor gene q25.33 Tumor suppressor gene Seq+ 40460 ChimerSeq STARFusion TCGA_RNA-Seq ALDH3B1-MYL4 ALDH3B1 chr11 67782929 + MYL4 chr17 45286755 + Exonic hg19 OV TCGA-29-1695-01A 14 0 CDS-5'UTR Inter-chr q13.2 q21.32 Seq+ 40461 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-29-1695-01A 13 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40462 ChimerSeq STARFusion TCGA_RNA-Seq IGFBP2-SPP1 IGFBP2 chr2 217528783 + SPP1 chr4 88896866 + Exonic hg19 OV TCGA-29-1695-01A 11 1 Out-of-frame Inter-chr q35 q22.1 40463 ChimerSeq STARFusion TCGA_RNA-Seq SIN3A-CYP11A1 SIN3A chr15 75714988 - CYP11A1 chr15 74640396 - Exonic hg19 OV TCGA-29-1695-01A 10 2 Out-of-frame Intra-chr q24.2 q24.1 Seq+ 40464 ChimerSeq STARFusion TCGA_RNA-Seq CHSY3-NINJ2 CHSY3 chr5 129244053 + NINJ2 chr12 675344 - Exonic hg19 OV TCGA-24-1104-01A 405 108 In-Frame Inter-chr q23.3 p13.33 Seq+ 40465 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734942 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-24-1104-01A 55 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40466 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-24-1104-01A 41 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40467 ChimerSeq STARFusion TCGA_RNA-Seq PNKD-ARPC2 PNKD chr2 219137405 + ARPC2 chr2 219093461 + Exonic hg19 OV TCGA-24-1104-01A 22 8 Out-of-frame Intra-chr q35 q35 Seq+ 40468 ChimerSeq STARFusion TCGA_RNA-Seq GPN2-C1orf172 GPN2 chr1 27215460 - C1orf172 chr1 27276642 - Exonic hg19 OV TCGA-24-1104-01A 17 4 In-Frame Intra-chr p36.11 Seq+ 40469 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPF-AKR1C4 HNRNPF chr10 43904579 - AKR1C4 chr10 5237428 + Exonic hg19 OV TCGA-24-1104-01A 15 0 5'UTR-5'UTR Intra-chr q11.21 p15.1 40470 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-24-1104-01A 11 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40471 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0753-PER1 KIAA0753 chr17 6538331 - PER1 chr17 8054163 - Exonic hg19 OV TCGA-24-1564-01A 32 21 CDS-5'UTR Intra-chr p13.1 p13.1 Oncogene Seq+ 40472 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R2A-BNIP3L PPP2R2A chr8 26151256 + BNIP3L chr8 26265516 + Exonic hg19 OV TCGA-24-1564-01A 17 16 Out-of-frame Intra-chr p21.2 p21.2 Tumor suppressor gene Seq+ 40473 ChimerSeq STARFusion TCGA_RNA-Seq TNS3-FGF10 TNS3 chr7 47568634 - FGF10 chr5 44389158 - Exonic hg19 OV TCGA-36-1569-01A 92 5 5'UTR-5'UTR Inter-chr p12.3 p12 Seq+ 40474 ChimerSeq STARFusion TCGA_RNA-Seq ITM2B-MATR3 ITM2B chr13 48807613 + MATR3 chr5 138665034 + Exonic hg19 OV TCGA-13-0799-01A 418 62 In-Frame Inter-chr q14.2 q31.2 Seq+ 40475 ChimerSeq STARFusion TCGA_RNA-Seq CEP350-TDRD5 CEP350 chr1 180010383 + TDRD5 chr1 179659831 + Exonic hg19 OV TCGA-13-0799-01A 36 11 Out-of-frame Intra-chr q25.2 q25.2 Seq+ 40476 ChimerSeq STARFusion TCGA_RNA-Seq SKAP1-NQO2 SKAP1 chr17 46423267 - NQO2 chr6 2994165 + Exonic hg19 OV TCGA-20-1687-01A 29 11 CDS-5'UTR Inter-chr q21.32 p25.2 Seq+ 40477 ChimerSeq STARFusion TCGA_RNA-Seq TTYH2-APOO TTYH2 chr17 72227138 + APOO chrX 23858494 - Exonic hg19 OV TCGA-20-1687-01A 28 2 In-Frame Inter-chr q25.1 p22.11 Seq+ 40478 ChimerSeq STARFusion TCGA_RNA-Seq PTPN9-SIN3A PTPN9 chr15 75798016 - SIN3A chr15 75668213 - Exonic hg19 OV TCGA-20-1687-01A 18 5 In-Frame Intra-chr q24.2 q24.2 40479 ChimerSeq STARFusion TCGA_RNA-Seq RPL8-CD74 RPL8 chr8 146016822 - CD74 chr5 149792314 - Exonic hg19 OV TCGA-20-1687-01A 12 5 Out-of-frame Inter-chr q24.3 q33.1 40480 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-20-1687-01A 10 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40481 ChimerSeq STARFusion TCGA_RNA-Seq C19orf43-ASNA1 C19orf43 chr19 12845127 - ASNA1 chr19 12856191 + Exonic hg19 OV TCGA-20-1687-01A 9 1 In-Frame Intra-chr p13.13 p13.13 Seq+ 40482 ChimerSeq STARFusion TCGA_RNA-Seq FAM53B-ZBTB7C FAM53B chr10 126370176 - ZBTB7C chr18 45712366 - Exonic hg19 OV TCGA-20-1687-01A 6 2 CDS-5'UTR Inter-chr q26.13 q21.1 Tumor suppressor gene Transcription factor 40483 ChimerSeq STARFusion TCGA_RNA-Seq SORL1-TECTA SORL1 chr11 121360819 + TECTA chr11 121058541 + Exonic hg19 OV TCGA-13-1487-01A 141 57 In-Frame Intra-chr q24.1 q23.3 Seq+ 40484 ChimerSeq STARFusion TCGA_RNA-Seq EZR-C1orf50 EZR chr6 159239114 - C1orf50 chr1 43239234 + Exonic hg19 OV TCGA-13-1487-01A 132 14 In-Frame Inter-chr q25.3 p34.2 Seq+ 40485 ChimerSeq STARFusion TCGA_RNA-Seq BRCC3-CLIC2 BRCC3 chrX 154319114 + CLIC2 chrX 154509357 - Exonic hg19 OV TCGA-13-1487-01A 28 2 In-Frame Intra-chr q28 q28 Seq+ 40486 ChimerSeq STARFusion TCGA_RNA-Seq COA6-SLC35F3 COA6 chr1 234510135 + SLC35F3 chr1 234444847 + Exonic hg19 OV TCGA-13-1487-01A 15 8 Out-of-frame Intra-chr q42.2 q42.2 Seq+ 40487 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890980 - BCAR4 chr16 11914154 - Exonic hg19 OV TCGA-13-1487-01A 16 2 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 40488 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-13-1487-01A 11 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40489 ChimerSeq STARFusion TCGA_RNA-Seq TOP1-FAM193B TOP1 chr20 39658095 + FAM193B chr5 176952206 - Exonic hg19 OV TCGA-13-1487-01A 8 3 Out-of-frame Inter-chr q12 Oncogene q35.3 Seq+ 40490 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-PTK2 AGO2 chr8 141645584 - PTK2 chr8 141675096 - Exonic hg19 OV TCGA-13-1487-01A 7 2 Out-of-frame Intra-chr q24.3 q24.3 40491 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 124934361 - SCARB1 chr12 125302253 - Exonic hg19 OV TCGA-13-1487-01A 6 0 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 40492 ChimerSeq STARFusion TCGA_RNA-Seq QRICH1-MDGA1 QRICH1 chr3 49131345 - MDGA1 chr6 37626195 - Exonic hg19 OV TCGA-13-1487-01A 6 0 5'UTR-CDS Inter-chr p21.31 p21.2 Seq+ 40493 ChimerSeq STARFusion TCGA_RNA-Seq SEMA4A-DAP3 SEMA4A chr1 156132885 + DAP3 chr1 155698833 + Exonic hg19 OV TCGA-13-1487-01A 6 0 In-Frame Intra-chr q22 q22 Seq+ 40494 ChimerSeq STARFusion TCGA_RNA-Seq ITCH-RALY ITCH chr20 32981687 + RALY chr20 32695970 + Exonic hg19 OV TCGA-13-1487-01A 4 5 CDS-3'UTR Intra-chr q11.22 q11.22 Seq+ 40495 ChimerSeq STARFusion TCGA_RNA-Seq PSMD1-ARSG PSMD1 chr2 231921755 + ARSG chr17 66416330 + Exonic hg19 OV TCGA-13-1487-01A 4 2 In-Frame Inter-chr q37.1 q24.2 Seq+ 40496 ChimerSeq STARFusion TCGA_RNA-Seq COA6-SLC35F3 COA6 chr1 234510135 + SLC35F3 chr1 234452348 + Exonic hg19 OV TCGA-13-1487-01A 2 8 Out-of-frame Intra-chr q42.2 q42.2 Seq+ 40497 ChimerSeq STARFusion TCGA_RNA-Seq TOP1-FAM193B TOP1 chr20 39658095 + FAM193B chr5 176949072 - Exonic hg19 OV TCGA-13-1487-01A 3 3 Out-of-frame Inter-chr q12 Oncogene q35.3 Seq+ 40498 ChimerSeq STARFusion TCGA_RNA-Seq BCAT1-PRB3 BCAT1 chr12 24995016 - PRB3 chr12 11421602 - Exonic hg19 OV TCGA-25-1870-01A 360 315 In-Frame Intra-chr p12.1 p13.2 Seq+ 40499 ChimerSeq STARFusion TCGA_RNA-Seq SOX5-FFAR2 SOX5 chr12 23818378 - FFAR2 chr19 35940616 + Exonic hg19 OV TCGA-25-1870-01A 62 22 CDS-5'UTR Inter-chr p12.1 Transcription factor q13.12 Seq+ 40500 ChimerSeq STARFusion TCGA_RNA-Seq GIPC1-UBL3 GIPC1 chr19 14602468 - UBL3 chr13 30351400 - Exonic hg19 OV TCGA-25-1870-01A 64 6 5'UTR-CDS Inter-chr p13.12 q12.3 Seq+ 40501 ChimerSeq STARFusion TCGA_RNA-Seq EFCAB4B-SOX5 EFCAB4B chr12 3822403 - SOX5 chr12 23818498 - Exonic hg19 OV TCGA-25-1870-01A 58 22 5'UTR-CDS Intra-chr p12.1 Transcription factor Seq+ 40502 ChimerSeq STARFusion TCGA_RNA-Seq ABCC9-DMKN ABCC9 chr12 22028588 - DMKN chr19 35996888 - Exonic hg19 OV TCGA-25-1870-01A 52 19 Out-of-frame Inter-chr p12.1 q13.12 Seq+ 40503 ChimerSeq STARFusion TCGA_RNA-Seq CD22-CADPS CD22 chr19 35823827 + CADPS chr3 62751659 - Exonic hg19 OV TCGA-25-1870-01A 45 4 Out-of-frame Inter-chr q13.12 p14.2 Seq+ 40504 ChimerSeq STARFusion TCGA_RNA-Seq CD22-CADPS CD22 chr19 35820133 + CADPS chr3 62751659 - Exonic hg19 OV TCGA-25-1870-01A 34 4 5'UTR-CDS Inter-chr q13.12 p14.2 Seq+ 40505 ChimerSeq STARFusion TCGA_RNA-Seq EFCAB4B-SOX5 EFCAB4B chr12 3822403 - SOX5 chr12 23818501 - Exonic hg19 OV TCGA-25-1870-01A 28 22 5'UTR-5'UTR Intra-chr p12.1 Transcription factor Seq+ 40506 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-25-1870-01A 12 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40507 ChimerSeq STARFusion TCGA_RNA-Seq ELL-GRIN2B ELL chr19 18632731 - GRIN2B chr12 14019160 - Exonic hg19 OV TCGA-25-1870-01A 11 0 CDS-5'UTR Inter-chr p13.11 p13.1 Seq+ 40508 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-25-1870-01A 10 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40509 ChimerSeq STARFusion TCGA_RNA-Seq LINC00623-RNF115 LINC00623 chr1 144339564 - RNF115 chr1 145682023 + Exonic hg19 OV TCGA-25-1870-01A 7 5 Out-of-frame Intra-chr p11.2 q21.1 40510 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K3-TACO1 MAP3K3 chr17 61700123 + TACO1 chr17 61673322 + Exonic hg19 OV TCGA-25-1870-01A 6 6 CDS-5'UTR Intra-chr q23.3 STE:STE11 q23.3 40511 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K3-TACO1 MAP3K3 chr17 61700123 + TACO1 chr17 61681894 + Exonic hg19 OV TCGA-25-1870-01A 5 6 In-Frame Intra-chr q23.3 STE:STE11 q23.3 40512 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734942 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-29-1770-01A 24 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40513 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A32-SMYD3 SLC25A32 chr8 104419862 - SMYD3 chr1 246518396 - Exonic hg19 OV TCGA-29-1770-01A 14 7 In-Frame Inter-chr q22.3 q44 Transcription factor Seq+ 40514 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-29-1770-01A 12 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40515 ChimerSeq STARFusion TCGA_RNA-Seq RPL13P12-PNMA2 RPL13P12 chr17 17286669 - PNMA2 chr8 26364477 - Exonic hg19 OV TCGA-29-1770-01A 12 0 Out-of-frame Inter-chr p21.2 40516 ChimerSeq STARFusion TCGA_RNA-Seq RPA2-STX12 RPA2 chr1 28240574 - STX12 chr1 28136757 + Exonic hg19 OV TCGA-29-1770-01A 11 1 In-Frame Intra-chr p35.3 p35.3 Seq+ 40517 ChimerSeq STARFusion TCGA_RNA-Seq MAVS-STK24 MAVS chr20 3845435 + STK24 chr13 99171727 - Exonic hg19 OV TCGA-29-1770-01A 9 2 In-Frame Inter-chr p13 q32.2 40518 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A32-SMYD3 SLC25A32 chr8 104427012 - SMYD3 chr1 246518396 - Exonic hg19 OV TCGA-29-1770-01A 7 7 Out-of-frame Inter-chr q22.3 q44 Transcription factor Seq+ 40519 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A32-SMYD3 SLC25A32 chr8 104413744 - SMYD3 chr1 246518396 - Exonic hg19 OV TCGA-29-1770-01A 4 7 In-Frame Inter-chr q22.3 q44 Transcription factor Seq+ 40520 ChimerSeq STARFusion TCGA_RNA-Seq CC2D1A-HCRT CC2D1A chr19 14017314 + HCRT chr17 40336546 - Exonic hg19 OV TCGA-29-1777-01A 98 1 In-Frame Inter-chr p13.12 Transcription factor q21.2 Seq+ 40521 ChimerSeq STARFusion TCGA_RNA-Seq POFUT2-LINC00316 POFUT2 chr21 46702264 - LINC00316 chr21 46758793 - Exonic hg19 OV TCGA-29-1777-01A 46 0 Out-of-frame Intra-chr q22.3 q22.3 40522 ChimerSeq STARFusion TCGA_RNA-Seq DOK5-PFDN4 DOK5 chr20 53092551 + PFDN4 chr20 52835558 + Exonic hg19 OV TCGA-29-1777-01A 20 0 In-Frame Intra-chr q13.2 q13.2 40523 ChimerSeq STARFusion TCGA_RNA-Seq ITM2B-RB1 ITM2B chr13 48807613 + RB1 chr13 48934153 + Exonic hg19 OV TCGA-29-1777-01A 11 0 Out-of-frame Intra-chr q14.2 q14.2 Oncogene Tumor suppressor gene Seq+ 40524 ChimerSeq STARFusion TCGA_RNA-Seq ALDH2-ATXN2 ALDH2 chr12 112204900 + ATXN2 chr12 111908546 - Exonic hg19 OV TCGA-29-1777-01A 8 0 Out-of-frame Intra-chr q24.12 q24.12 Seq+ 40525 ChimerSeq STARFusion TCGA_RNA-Seq SYT2-CHI3L1 SYT2 chr1 202679386 - CHI3L1 chr1 203153760 - Exonic hg19 OV TCGA-29-1777-01A 8 0 5'UTR-CDS Intra-chr q32.1 q32.1 40526 ChimerSeq STARFusion TCGA_RNA-Seq PHACTR4-LRRC42 PHACTR4 chr1 28733974 + LRRC42 chr1 54426029 + Exonic hg19 OV TCGA-29-A5NZ-01A 55 23 Out-of-frame Intra-chr p35.3 Tumor suppressor gene p32.3 Seq+ 40527 ChimerSeq STARFusion TCGA_RNA-Seq DCAF5-RAD51B DCAF5 chr14 69558391 - RAD51B chr14 68934889 + Exonic hg19 OV TCGA-29-A5NZ-01A 54 11 In-Frame Intra-chr q24.1 q24.1 KB Seq+ 40528 ChimerSeq STARFusion TCGA_RNA-Seq FRAS1-MGST2 FRAS1 chr4 79322041 + MGST2 chr4 140616351 + Exonic hg19 OV TCGA-29-A5NZ-01A 50 15 Out-of-frame Intra-chr q21.21 q31.1 Seq+ 40529 ChimerSeq STARFusion TCGA_RNA-Seq PHACTR4-LRRC42 PHACTR4 chr1 28764941 + LRRC42 chr1 54426029 + Exonic hg19 OV TCGA-29-A5NZ-01A 22 23 Out-of-frame Intra-chr p35.3 Tumor suppressor gene p32.3 Seq+ 40530 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPF-ZNF33B HNRNPF chr10 43891904 - ZNF33B chr10 43132420 - Exonic hg19 OV TCGA-29-A5NZ-01A 25 10 5'UTR-5'UTR Intra-chr q11.21 q11.21 Transcription factor Seq+ 40531 ChimerSeq STARFusion TCGA_RNA-Seq CLN3-SIVA1 CLN3 chr16 28497668 - SIVA1 chr14 105225556 + Exonic hg19 OV TCGA-29-A5NZ-01A 23 13 Out-of-frame Inter-chr p12.1 q32.33 Seq+ 40532 ChimerSeq STARFusion TCGA_RNA-Seq PIK3C2B-C1orf116 PIK3C2B chr1 204433140 - C1orf116 chr1 207201024 - Exonic hg19 OV TCGA-29-A5NZ-01A 25 1 CDS-5'UTR Intra-chr q32.1 Oncogene q32.1 Seq+ 40533 ChimerSeq STARFusion TCGA_RNA-Seq SIVA1-PTBP1P SIVA1 chr14 105219656 + PTBP1P chr14 65746065 + Exonic hg19 OV TCGA-29-A5NZ-01A 20 7 Out-of-frame Intra-chr q32.33 q23.3 Seq+ 40534 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPF-ZNF33B HNRNPF chr10 43891904 - ZNF33B chr10 43127887 - Exonic hg19 OV TCGA-29-A5NZ-01A 20 6 5'UTR-CDS Intra-chr q11.21 q11.21 Transcription factor Seq+ 40535 ChimerSeq STARFusion TCGA_RNA-Seq SPECC1L-XPNPEP3 SPECC1L chr22 24709434 + XPNPEP3 chr22 41318337 + Exonic hg19 OV TCGA-29-A5NZ-01A 19 8 Out-of-frame Intra-chr q11.23 q13.2 Seq+ 40536 ChimerSeq STARFusion TCGA_RNA-Seq PHACTR4-LRRC42 PHACTR4 chr1 28765872 + LRRC42 chr1 54426029 + Exonic hg19 OV TCGA-29-A5NZ-01A 14 23 Out-of-frame Intra-chr p35.3 Tumor suppressor gene p32.3 Seq+ 40537 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPF-ZNF33B HNRNPF chr10 43891904 - ZNF33B chr10 43127887 - Exonic hg19 OV TCGA-29-A5NZ-01A 18 6 5'UTR-CDS Intra-chr q11.21 q11.21 Transcription factor Seq+ 40538 ChimerSeq STARFusion TCGA_RNA-Seq ELMSAN1-VSX2 ELMSAN1 chr14 74253805 - VSX2 chr14 74707885 + Exonic hg19 OV TCGA-29-A5NZ-01A 17 7 Out-of-frame Intra-chr q24.3 q24.3 Transcription factor Seq+ 40539 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPF-ZNF33B HNRNPF chr10 43891904 - ZNF33B chr10 43132420 - Exonic hg19 OV TCGA-29-A5NZ-01A 16 6 5'UTR-5'UTR Intra-chr q11.21 q11.21 Transcription factor Seq+ 40540 ChimerSeq STARFusion TCGA_RNA-Seq EPHB2-MAST2 EPHB2 chr1 23037536 + MAST2 chr1 46468477 + Exonic hg19 OV TCGA-29-A5NZ-01A 14 5 Out-of-frame Intra-chr p36.12 Tumor suppressor gene p34.1 AGC:MAST Seq+ 40541 ChimerSeq STARFusion TCGA_RNA-Seq JDP2-PLEKHH1 JDP2 chr14 75904824 + PLEKHH1 chr14 68008551 + Exonic hg19 OV TCGA-29-A5NZ-01A 14 5 CDS-5'UTR Intra-chr q24.3 Tumor suppressor gene Transcription factor q24.1 Seq+ 40542 ChimerSeq STARFusion TCGA_RNA-Seq FRAS1-MGST2 FRAS1 chr4 79322041 + MGST2 chr4 140624609 + Exonic hg19 OV TCGA-29-A5NZ-01A 10 15 In-Frame Intra-chr q21.21 q31.1 Seq+ 40543 ChimerSeq STARFusion TCGA_RNA-Seq SIVA1-PTBP1P SIVA1 chr14 105222161 + PTBP1P chr14 65746065 + Exonic hg19 OV TCGA-29-A5NZ-01A 12 7 Out-of-frame Intra-chr q32.33 q23.3 Seq+ 40544 ChimerSeq STARFusion TCGA_RNA-Seq MOCS1-LEMD3 MOCS1 chr6 39893422 - LEMD3 chr12 65632282 + Exonic hg19 OV TCGA-29-A5NZ-01A 12 3 Out-of-frame Inter-chr p21.2 q14.3 Seq+ 40545 ChimerSeq STARFusion TCGA_RNA-Seq ELMSAN1-VSX2 ELMSAN1 chr14 74253805 - VSX2 chr14 74711868 + Exonic hg19 OV TCGA-29-A5NZ-01A 10 7 Out-of-frame Intra-chr q24.3 q24.3 Transcription factor Seq+ 40546 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-HERC2P4 CREBBP chr16 3929833 - HERC2P4 chr16 32164326 - Exonic hg19 OV TCGA-29-A5NZ-01A 8 5 CDS-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p11.2 40547 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPF-ZNF33B HNRNPF chr10 43891904 - ZNF33B chr10 43127472 - Exonic hg19 OV TCGA-29-A5NZ-01A 5 10 5'UTR-CDS Intra-chr q11.21 q11.21 Transcription factor Seq+ 40548 ChimerSeq STARFusion TCGA_RNA-Seq CLN3-SIVA1 CLN3 chr16 28497668 - SIVA1 chr14 105225218 + Exonic hg19 OV TCGA-29-A5NZ-01A 3 13 Out-of-frame Inter-chr p12.1 q32.33 Seq+ 40549 ChimerSeq STARFusion TCGA_RNA-Seq EPG5-RAB38 EPG5 chr18 43467716 - RAB38 chr11 87847308 - Exonic hg19 OV TCGA-29-1778-01A 33 4 In-Frame Inter-chr q21.1 q14.2 Seq+ 40550 ChimerSeq STARFusion TCGA_RNA-Seq USP6NL-AHCY USP6NL chr10 11639630 - AHCY chr20 32883391 - Exonic hg19 OV TCGA-29-1778-01A 30 2 In-Frame Inter-chr p14 q11.22 Seq+ 40551 ChimerSeq STARFusion TCGA_RNA-Seq GTPBP2-VEGFA GTPBP2 chr6 43592247 - VEGFA chr6 43752278 + Exonic hg19 OV TCGA-29-1778-01A 22 1 In-Frame Intra-chr p21.1 p21.1 Tumor suppressor gene Seq+ 40552 ChimerSeq STARFusion TCGA_RNA-Seq TMEM165-DACH1 TMEM165 chr4 56290810 + DACH1 chr13 72063280 - Exonic hg19 OV TCGA-29-1778-01A 20 0 In-Frame Inter-chr q12 q21.33 Tumor suppressor gene Transcription factor Seq+ 40553 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-RERE ZBTB20 chr3 114619151 - RERE chr1 8674745 - Exonic hg19 OV TCGA-29-1778-01A 14 4 5'UTR-CDS Inter-chr q13.31 Transcription factor p36.23 Seq+ 40554 ChimerSeq STARFusion TCGA_RNA-Seq RNF130-NHP2 RNF130 chr5 179440061 - NHP2 chr5 177577994 - Exonic hg19 OV TCGA-29-1778-01A 11 3 Out-of-frame Intra-chr q35.3 q35.3 40555 ChimerSeq STARFusion TCGA_RNA-Seq MACF1-LSAMP MACF1 chr1 39847824 + LSAMP chr3 116163802 - Exonic hg19 OV TCGA-29-1778-01A 11 0 In-Frame Inter-chr p34.3 q13.31 Tumor suppressor gene Seq+ 40556 ChimerSeq STARFusion TCGA_RNA-Seq MACF1-DKFZP434E1119 MACF1 chr1 39776109 + DKFZP434E1119 chr11 77184597 + Exonic hg19 OV TCGA-29-1778-01A 10 1 Out-of-frame Inter-chr p34.3 40557 ChimerSeq STARFusion TCGA_RNA-Seq ATP8A1-CRMP1 ATP8A1 chr4 42626553 - CRMP1 chr4 5844888 - Exonic hg19 OV TCGA-25-1324-01A 125 29 In-Frame Intra-chr p13 p16.2 Seq+ 40558 ChimerSeq STARFusion TCGA_RNA-Seq PVR-HPN PVR chr19 45161178 + HPN chr19 35556154 + Exonic hg19 OV TCGA-25-1324-01A 21 39 In-Frame Intra-chr q13.31 q13.11 Seq+ 40559 ChimerSeq STARFusion TCGA_RNA-Seq PVR-HPN PVR chr19 45162033 + HPN chr19 35556154 + Exonic hg19 OV TCGA-25-1324-01A 20 39 In-Frame Intra-chr q13.31 q13.11 Seq+ 40560 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0195-CASKIN2 KIAA0195 chr17 73482507 + CASKIN2 chr17 73504366 - Exonic hg19 OV TCGA-25-1324-01A 26 13 In-Frame Intra-chr q25.1 Seq+ 40561 ChimerSeq STARFusion TCGA_RNA-Seq PVR-HPN PVR chr19 45162030 + HPN chr19 35556151 + Exonic hg19 OV TCGA-25-1324-01A 19 39 Out-of-frame Intra-chr q13.31 q13.11 Seq+ 40562 ChimerSeq STARFusion TCGA_RNA-Seq TRABD2B-OLFM3 TRABD2B chr1 48459706 - OLFM3 chr1 102302581 - Exonic hg19 OV TCGA-25-1324-01A 25 3 Out-of-frame Intra-chr p33 p21.1 Seq+ 40563 ChimerSeq STARFusion TCGA_RNA-Seq PVR-HPN PVR chr19 45162168 + HPN chr19 35556154 + Exonic hg19 OV TCGA-25-1324-01A 15 39 In-Frame Intra-chr q13.31 q13.11 Seq+ 40564 ChimerSeq STARFusion TCGA_RNA-Seq C3-GPR108 C3 chr19 6707087 - GPR108 chr19 6735969 - Exonic hg19 OV TCGA-61-2094-01A 376 131 Out-of-frame Intra-chr p13.3 p13.3 40565 ChimerSeq STARFusion TCGA_RNA-Seq SORL1-TBCEL SORL1 chr11 121348952 + TBCEL chr11 120957487 + Exonic hg19 OV TCGA-61-2094-01A 70 13 Out-of-frame Intra-chr q24.1 q23.3 Seq+ 40566 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-NOMO1 ZFAND3 chr6 37787792 + NOMO1 chr16 14932264 + Exonic hg19 OV TCGA-61-2094-01A 59 2 Out-of-frame Inter-chr p21.2 40567 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF2-MEX3A ARHGEF2 chr1 155934779 - MEX3A chr1 156051802 - Exonic hg19 OV TCGA-61-2094-01A 21 2 CDS-5'UTR Intra-chr q22 q22 40568 ChimerSeq STARFusion TCGA_RNA-Seq NT5C3A-RP9 NT5C3A chr7 33102180 - RP9 chr7 33136974 - Exonic hg19 OV TCGA-61-2094-01A 17 2 Out-of-frame Intra-chr p14.3 p14.3 40569 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-61-2094-01A 16 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40570 ChimerSeq STARFusion TCGA_RNA-Seq CAMK1D-DHTKD1 CAMK1D chr10 12391909 + DHTKD1 chr10 12159672 + Exonic hg19 OV TCGA-61-2094-01A 15 3 Out-of-frame Intra-chr p13 p14 40571 ChimerSeq STARFusion TCGA_RNA-Seq CD74-IGH@ CD74 chr5 149781282 - IGH@ chr14 106642047 - Exonic hg19 OV TCGA-61-2094-01A 6 14 Out-of-frame Inter-chr q33.1 32.33 40572 ChimerSeq STARFusion TCGA_RNA-Seq SPTBN4-TDP1 SPTBN4 chr19 41040250 + TDP1 chr14 90485660 + Exonic hg19 OV TCGA-29-1762-01A 326 15 Out-of-frame Inter-chr q13.2 q32.11 Seq+ 40573 ChimerSeq STARFusion TCGA_RNA-Seq PDCD10-CNKSR2 PDCD10 chr3 167452594 - CNKSR2 chrX 21627189 + Exonic hg19 OV TCGA-59-2354-01A 47 4 5'UTR-CDS Inter-chr q26.1 p22.12 Seq+ 40574 ChimerSeq STARFusion TCGA_RNA-Seq PDCD10-CNKSR2 PDCD10 chr3 167452594 - CNKSR2 chrX 21666949 + Exonic hg19 OV TCGA-59-2354-01A 46 4 5'UTR-CDS Inter-chr q26.1 p22.12 Seq+ 40575 ChimerSeq STARFusion TCGA_RNA-Seq AUTS2-BPI AUTS2 chr7 69064948 + BPI chr20 36917118 + Exonic hg19 OV TCGA-59-2354-01A 17 0 CDS-5'UTR Inter-chr q11.22 q11.23 Seq+ 40576 ChimerSeq STARFusion TCGA_RNA-Seq EHMT1-SPATA17 EHMT1 chr9 140513501 + SPATA17 chr1 217856600 + Exonic hg19 OV TCGA-24-1924-01A 38 1 In-Frame Inter-chr q34.3 q41 Seq+ 40577 ChimerSeq STARFusion TCGA_RNA-Seq SRGAP3-RAD18 SRGAP3 chr3 9089075 - RAD18 chr3 8932135 - Exonic hg19 OV TCGA-24-1924-01A 12 4 Out-of-frame Intra-chr p25.3 Tumor suppressor gene p25.3 Seq+ 40578 ChimerSeq STARFusion TCGA_RNA-Seq EHMT1-SPATA17 EHMT1 chr9 140513501 + SPATA17 chr1 217915317 + Exonic hg19 OV TCGA-24-1924-01A 10 1 Out-of-frame Inter-chr q34.3 q41 Seq+ 40579 ChimerSeq STARFusion TCGA_RNA-Seq ZNF428-ETHE1 ZNF428 chr19 44123710 - ETHE1 chr19 44015718 - Exonic hg19 OV TCGA-09-1674-01A 55 7 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.31 Seq+ 40580 ChimerSeq STARFusion TCGA_RNA-Seq FAM76A-LRFN1 FAM76A chr1 28060694 + LRFN1 chr19 39806776 - Exonic hg19 OV TCGA-09-1674-01A 49 9 CDS-5'UTR Inter-chr p35.3 q13.2 40581 ChimerSeq STARFusion TCGA_RNA-Seq PHACTR4-SCMH1 PHACTR4 chr1 28696336 + SCMH1 chr1 41541123 - Exonic hg19 OV TCGA-09-1674-01A 34 8 5'UTR-CDS Intra-chr p35.3 Tumor suppressor gene p34.2 Transcription factor Seq+ 40582 ChimerSeq STARFusion TCGA_RNA-Seq CCT7-ALMS1 CCT7 chr2 73461512 + ALMS1 chr2 73716761 + Exonic hg19 OV TCGA-09-1674-01A 14 2 In-Frame Intra-chr p13.2 p13.1 Seq+ 40583 ChimerSeq STARFusion TCGA_RNA-Seq ZNF420-SIPA1L3 ZNF420 chr19 37582023 + SIPA1L3 chr19 38590602 + Exonic hg19 OV TCGA-09-1674-01A 14 2 Out-of-frame Intra-chr q13.12 Transcription factor q13.13 Seq+ 40584 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821632 - Exonic hg19 OV TCGA-04-1347-01A 19 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40585 ChimerSeq STARFusion TCGA_RNA-Seq TRIM33-ABCA4 TRIM33 chr1 115053172 - ABCA4 chr1 94458798 - Exonic hg19 OV TCGA-04-1347-01A 18 4 Out-of-frame Intra-chr p13.2 Oncogene p22.1 Seq+ 40586 ChimerSeq STARFusion TCGA_RNA-Seq STXBP6-PLEKHA4 STXBP6 chr14 25325142 - PLEKHA4 chr19 49341386 - Exonic hg19 OV TCGA-04-1347-01A 13 2 Out-of-frame Inter-chr q12 q13.33 Seq+ 40587 ChimerSeq STARFusion TCGA_RNA-Seq PDPK1-PRSS21 PDPK1 chr16 2636894 + PRSS21 chr16 2875971 + Exonic hg19 OV TCGA-04-1347-01A 9 0 CDS-3'UTR Intra-chr p13.3 Seq+ 40588 ChimerSeq STARFusion TCGA_RNA-Seq AFG3L1P-ACSF3 AFG3L1P chr16 90039173 + ACSF3 chr16 89187209 + Exonic hg19 OV TCGA-13-0899-01A 25 7 5'UTR-5'UTR Intra-chr q24.3 q24.3 40589 ChimerSeq STARFusion TCGA_RNA-Seq RSF1-PAK1 RSF1 chr11 77451776 - PAK1 chr11 77070062 - Exonic hg19 OV TCGA-13-0899-01A 21 11 Out-of-frame Intra-chr q14.1 q14.1 STE:STE20 Seq+ 40590 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-LRP5 PPP6R3 chr11 68228295 + LRP5 chr11 68204357 + Exonic hg19 OV TCGA-24-2023-01A 150 83 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 40591 ChimerSeq STARFusion TCGA_RNA-Seq UNC45A-IQGAP1 UNC45A chr15 91483703 + IQGAP1 chr15 91029262 + Exonic hg19 OV TCGA-24-2023-01A 114 16 In-Frame Intra-chr q26.1 q26.1 Seq+ 40592 ChimerSeq STARFusion TCGA_RNA-Seq PHF12-SEZ6 PHF12 chr17 27277083 - SEZ6 chr17 27309057 - Exonic hg19 OV TCGA-24-2023-01A 90 17 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 40593 ChimerSeq STARFusion TCGA_RNA-Seq GMEB1-TRNAU1AP GMEB1 chr1 28995351 + TRNAU1AP chr1 28897688 + Exonic hg19 OV TCGA-24-2023-01A 81 14 5'UTR-5'UTR Intra-chr p35.3 Transcription factor p35.3 Seq+ 40594 ChimerSeq STARFusion TCGA_RNA-Seq SFMBT1-TKT SFMBT1 chr3 53079832 - TKT chr3 53276258 - Exonic hg19 OV TCGA-24-2023-01A 69 23 5'UTR-CDS Intra-chr p21.1 p21.1 Tumor suppressor gene Seq+ 40595 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-LRP5 PPP6R3 chr11 68272739 + LRP5 chr11 68204357 + Exonic hg19 OV TCGA-24-2023-01A 29 83 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 40596 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-LRP5 PPP6R3 chr11 68228295 + LRP5 chr11 68205914 + Exonic hg19 OV TCGA-24-2023-01A 28 83 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 40597 ChimerSeq STARFusion TCGA_RNA-Seq INPP5A-C10orf91 INPP5A chr10 134351675 + C10orf91 chr10 134259200 + Exonic hg19 OV TCGA-24-2023-01A 45 11 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 40598 ChimerSeq STARFusion TCGA_RNA-Seq RNF214-PAFAH1B2 RNF214 chr11 117115301 + PAFAH1B2 chr11 117042338 + Exonic hg19 OV TCGA-24-2023-01A 44 9 In-Frame Intra-chr q23.3 q23.3 Seq+ 40599 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-LRP5 PPP6R3 chr11 68272717 + LRP5 chr11 68204357 + Exonic hg19 OV TCGA-24-2023-01A 19 83 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 40600 ChimerSeq STARFusion TCGA_RNA-Seq USP32-NPTN USP32 chr17 58469243 - NPTN chr15 73866136 - Exonic hg19 OV TCGA-24-2023-01A 35 8 In-Frame Inter-chr q23.2 q24.1 Seq+ 40601 ChimerSeq STARFusion TCGA_RNA-Seq ATP13A3-IQCG ATP13A3 chr3 194170874 - IQCG chr3 197619630 - Exonic hg19 OV TCGA-24-2023-01A 34 8 Out-of-frame Intra-chr q29 q29 Seq+ 40602 ChimerSeq STARFusion TCGA_RNA-Seq PIK3R3-RDH10 PIK3R3 chr1 46597519 - RDH10 chr8 74209429 + Exonic hg19 OV TCGA-24-2023-01A 30 6 In-Frame Inter-chr p34.1 q21.11 Seq+ 40603 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-UBE2D2 SNHG3 chr1 28834672 + UBE2D2 chr5 138979957 + Exonic hg19 OV TCGA-24-2023-01A 24 2 5'UTR-5'UTR Inter-chr p35.3 q31.2 40604 ChimerSeq STARFusion TCGA_RNA-Seq GBX1-PRKAG2 GBX1 chr7 150864098 - PRKAG2 chr7 151372723 - Exonic hg19 OV TCGA-24-2023-01A 21 2 In-Frame Intra-chr q36.1 Transcription factor q36.1 Seq+ 40605 ChimerSeq STARFusion TCGA_RNA-Seq TSNAX-OR10J3 TSNAX chr1 231678357 + OR10J3 chr1 159284474 - Exonic hg19 OV TCGA-24-2023-01A 20 2 CDS-5'UTR Intra-chr q42.2 q23.2 40606 ChimerSeq STARFusion TCGA_RNA-Seq ANLN-EEPD1 ANLN chr7 36459088 + EEPD1 chr7 36320724 + Exonic hg19 OV TCGA-24-2023-01A 19 5 In-Frame Intra-chr p14.2 p14.2 Seq+ 40607 ChimerSeq STARFusion TCGA_RNA-Seq SFMBT1-TKT SFMBT1 chr3 53080476 - TKT chr3 53276258 - Exonic hg19 OV TCGA-24-2023-01A 13 23 5'UTR-CDS Intra-chr p21.1 p21.1 Tumor suppressor gene Seq+ 40608 ChimerSeq STARFusion TCGA_RNA-Seq NUMA1-ZNF705E NUMA1 chr11 71780888 - ZNF705E chr11 71532593 - Exonic hg19 OV TCGA-24-2023-01A 18 2 Out-of-frame Intra-chr q13.4 Oncogene q13.4 Transcription factor 40609 ChimerSeq STARFusion TCGA_RNA-Seq PDIA5-CASR PDIA5 chr3 122829851 + CASR chr3 121972795 + Exonic hg19 OV TCGA-24-2023-01A 15 3 5'UTR-5'UTR Intra-chr q21.1 q13.33 Seq+ 40610 ChimerSeq STARFusion TCGA_RNA-Seq GMEB1-TRNAU1AP GMEB1 chr1 28995351 + TRNAU1AP chr1 28898379 + Exonic hg19 OV TCGA-24-2023-01A 11 14 5'UTR-5'UTR Intra-chr p35.3 Transcription factor p35.3 Seq+ 40611 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-24-2023-01A 14 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40612 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-2023-01A 14 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40613 ChimerSeq STARFusion TCGA_RNA-Seq CRTC1-KLHL26 CRTC1 chr19 18794638 + KLHL26 chr19 18775071 + Exonic hg19 OV TCGA-24-2023-01A 13 0 Out-of-frame Intra-chr p13.11 Oncogene p13.11 Seq+ 40614 ChimerSeq STARFusion TCGA_RNA-Seq GPR160-SEC62 GPR160 chr3 169756831 + SEC62 chr3 169693396 + Exonic hg19 OV TCGA-24-2023-01A 11 4 5'UTR-CDS Intra-chr q26.2 q26.2 Seq+ 40615 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-YARS PUM1 chr1 31501643 - YARS chr1 33276658 - Exonic hg19 OV TCGA-24-2023-01A 10 2 In-Frame Intra-chr p35.2 p35.1 Seq+ 40616 ChimerSeq STARFusion TCGA_RNA-Seq RNF214-PAFAH1B2 RNF214 chr11 117115301 + PAFAH1B2 chr11 117046622 + Exonic hg19 OV TCGA-24-2023-01A 8 9 In-Frame Intra-chr q23.3 q23.3 Seq+ 40617 ChimerSeq STARFusion TCGA_RNA-Seq INPP5A-C10orf91 INPP5A chr10 134351675 + C10orf91 chr10 134261241 + Exonic hg19 OV TCGA-24-2023-01A 7 11 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 40618 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-DDHD2 IGH@ chr14 106478108 - DDHD2 chr8 38088870 + Exonic hg19 OV TCGA-24-1545-01A 175 1 Out-of-frame Inter-chr 32.33 p11.23 40619 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-SLC9A1 WASF2 chr1 27816497 - SLC9A1 chr1 27429803 - Exonic hg19 OV TCGA-24-1545-01A 142 60 5'UTR-CDS Intra-chr p36.11 p36.11 Seq+ 40620 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076852 + IGH@ chr14 106209410 - Exonic hg19 OV TCGA-24-1545-01A 105 0 Out-of-frame Inter-chr q21.2 32.33 40621 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076852 + IGHG1 chr14 106209410 - Exonic hg19 OV TCGA-24-1545-01A 105 0 Out-of-frame Inter-chr q21.2 q32.33 40622 ChimerSeq STARFusion TCGA_RNA-Seq ABCB9-IGH@ ABCB9 chr12 123413740 - IGH@ chr14 106330461 - Exonic hg19 OV TCGA-24-1545-01A 45 1 Out-of-frame Inter-chr q24.31 32.33 40623 ChimerSeq STARFusion TCGA_RNA-Seq ABCB9-IGH@ ABCB9 chr12 123413737 - IGH@ chr14 106331650 - Exonic hg19 OV TCGA-24-1545-01A 43 1 Out-of-frame Inter-chr q24.31 32.33 40624 ChimerSeq STARFusion TCGA_RNA-Seq RAB11FIP3-CAPN15 RAB11FIP3 chr16 476720 + CAPN15 chr16 596817 + Exonic hg19 OV TCGA-24-1545-01A 24 13 Out-of-frame Intra-chr p13.3 Seq+ 40625 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-PPP5D1 IGL@ chr22 23063636 + PPP5D1 chr19 47104304 - Exonic hg19 OV TCGA-24-1545-01A 20 0 Out-of-frame Inter-chr q11.22 q13.32 40626 ChimerSeq STARFusion TCGA_RNA-Seq SOWAHC-IGL@ SOWAHC chr2 110376160 + IGL@ chr22 23241799 + Exonic hg19 OV TCGA-24-1545-01A 18 0 Out-of-frame Inter-chr q13 q11.22 40627 ChimerSeq STARFusion TCGA_RNA-Seq SOWAHC-IGLC2 SOWAHC chr2 110376160 + IGLC2 chr22 23241799 + Exonic hg19 OV TCGA-24-1545-01A 18 0 Out-of-frame Inter-chr q13 q11.22 40628 ChimerSeq STARFusion TCGA_RNA-Seq SOWAHC-IGLJ2 SOWAHC chr2 110376160 + IGLJ2 chr22 23241799 + Exonic hg19 OV TCGA-24-1545-01A 18 0 Out-of-frame Inter-chr q13 q11.22 40629 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-1545-01A 16 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40630 ChimerSeq STARFusion TCGA_RNA-Seq TMEM132D-IGKJ3 TMEM132D chr12 130015581 - IGKJ3 chr2 89160770 - Exonic hg19 OV TCGA-24-1545-01A 16 0 Out-of-frame Inter-chr q24.33 p11.2 40631 ChimerSeq STARFusion TCGA_RNA-Seq MFSD6-C2orf88 MFSD6 chr2 191302287 + C2orf88 chr2 191064423 + Exonic hg19 OV TCGA-24-1545-01A 10 11 CDS-5'UTR Intra-chr q32.2 q32.2 Seq+ 40632 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61665880 - ANK3 chr10 61802517 - Exonic hg19 OV TCGA-24-2033-01A 231 32 In-Frame Intra-chr q21.2 q21.2 Seq+ 40633 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61665880 - ANK3 chr10 61802514 - Exonic hg19 OV TCGA-24-2033-01A 148 32 In-Frame Intra-chr q21.2 q21.2 Seq+ 40634 ChimerSeq STARFusion TCGA_RNA-Seq PAK1-NARS2 PAK1 chr11 77184597 - NARS2 chr11 78189729 - Exonic hg19 OV TCGA-24-2033-01A 65 9 5'UTR-CDS Intra-chr q14.1 STE:STE20 q14.1 Seq+ 40635 ChimerSeq STARFusion TCGA_RNA-Seq GADD45GIP1-DAND5 GADD45GIP1 chr19 13067677 - DAND5 chr19 13084203 + Exonic hg19 OV TCGA-24-2033-01A 27 1 Out-of-frame Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 40636 ChimerSeq STARFusion TCGA_RNA-Seq KLHL14-CCDC178 KLHL14 chr18 30349608 - CCDC178 chr18 30518055 - Exonic hg19 OV TCGA-24-2033-01A 25 2 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 40637 ChimerSeq STARFusion TCGA_RNA-Seq DDX39A-EMR3 DDX39A chr19 14523825 - EMR3 chr19 14762016 - Exonic hg19 OV TCGA-24-2033-01A 23 4 In-Frame Intra-chr p13.12 Seq+ 40638 ChimerSeq STARFusion TCGA_RNA-Seq KLHL14-CCDC178 KLHL14 chr18 30349608 - CCDC178 chr18 30554645 - Exonic hg19 OV TCGA-24-2033-01A 20 2 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 40639 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS13-NIPAL2 TMPRSS13 chr11 117800002 - NIPAL2 chr8 99248442 - Exonic hg19 OV TCGA-24-2033-01A 14 1 Out-of-frame Inter-chr q23.3 q22.2 Seq+ 40640 ChimerSeq STARFusion TCGA_RNA-Seq NXN-IL6R NXN chr17 882559 - IL6R chr1 154406995 + Exonic hg19 OV TCGA-24-2033-01A 9 1 Out-of-frame Inter-chr p13.3 q21.3 Seq+ 40641 ChimerSeq STARFusion TCGA_RNA-Seq PAK1-NARS2 PAK1 chr11 77122819 - NARS2 chr11 78189729 - Exonic hg19 OV TCGA-24-2033-01A 7 9 5'UTR-CDS Intra-chr q14.1 STE:STE20 q14.1 Seq+ 40642 ChimerSeq STARFusion TCGA_RNA-Seq USP53-SYNPO2 USP53 chr4 120138828 + SYNPO2 chr4 119944585 + Exonic hg19 OV TCGA-24-2033-01A 9 1 5'UTR-CDS Intra-chr q26 q26 Tumor suppressor gene Seq+ 40643 ChimerSeq STARFusion TCGA_RNA-Seq ACTR1A-FCGRT ACTR1A chr10 104247907 - FCGRT chr19 50027764 + Exonic hg19 OV TCGA-24-2033-01A 7 1 Out-of-frame Inter-chr q24.32 q13.33 40644 ChimerSeq STARFusion TCGA_RNA-Seq HSPA8-GRIK5 HSPA8 chr11 122932772 - GRIK5 chr19 42546907 - Exonic hg19 OV TCGA-09-1670-01A 49 0 5'UTR-CDS Inter-chr q24.1 q13.2 Seq+ 40645 ChimerSeq STARFusion TCGA_RNA-Seq MUC16-SBNO2 MUC16 chr19 8968880 - SBNO2 chr19 1127764 - Exonic hg19 OV TCGA-09-1670-01A 19 0 Out-of-frame Intra-chr p13.2 p13.3 Seq+ 40646 ChimerSeq STARFusion TCGA_RNA-Seq PDE4D-DEPDC1B PDE4D chr5 59783769 - DEPDC1B chr5 59943360 - Exonic hg19 OV TCGA-09-1670-01A 11 1 5'UTR-CDS Intra-chr q12.1 q12.1 Seq+ 40647 ChimerSeq STARFusion TCGA_RNA-Seq LINC00152-PLGLB1 LINC00152 chr2 87755164 + PLGLB1 chr2 87243531 - Exonic hg19 OV TCGA-25-1634-01A 9 3 5'UTR-5'UTR Intra-chr p11.2 40648 ChimerSeq STARFusion TCGA_RNA-Seq APBB3-TMEM163 APBB3 chr5 139973238 - TMEM163 chr2 135309662 - Exonic hg19 OV TCGA-25-1634-01A 5 6 5'UTR-CDS Inter-chr q31.3 q21.3 40649 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57886157 + Exonic hg19 OV TCGA-25-1315-01A 281 50 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 40650 ChimerSeq STARFusion TCGA_RNA-Seq UCK2-PBX1 UCK2 chr1 165797169 + PBX1 chr1 164761731 + Exonic hg19 OV TCGA-25-1315-01A 103 31 Out-of-frame Intra-chr q24.1 q23.3 Oncogene Transcription factor Seq+ 40651 ChimerSeq STARFusion TCGA_RNA-Seq JUP-SCGB2B2 JUP chr17 39925221 - SCGB2B2 chr19 35123545 - Exonic hg19 OV TCGA-25-1315-01A 71 35 CDS-5'UTR Inter-chr q21.2 Tumor suppressor gene q13.11 Seq+ 40652 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734942 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-25-1315-01A 26 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40653 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD13C-OR5V1 ANKRD13C chr1 70766447 - OR5V1 chr6 29324054 - Exonic hg19 OV TCGA-25-1315-01A 21 12 CDS-5'UTR Inter-chr p31.1 Seq+ 40654 ChimerSeq STARFusion TCGA_RNA-Seq VEZT-SLC25A3 VEZT chr12 95688148 + SLC25A3 chr12 98993733 + Exonic hg19 OV TCGA-25-1315-01A 21 3 Out-of-frame Intra-chr q22 Tumor suppressor gene q23.1 40655 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069803 - Exonic hg19 OV TCGA-25-1315-01A 14 0 Out-of-frame Inter-chr q12.3 q32.2 40656 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-25-1315-01A 13 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40657 ChimerSeq STARFusion TCGA_RNA-Seq LTBP2-NEK9 LTBP2 chr14 74999129 - NEK9 chr14 75558181 - Exonic hg19 OV TCGA-25-1315-01A 12 1 In-Frame Intra-chr q24.3 q24.3 Other:NEK Seq+ 40658 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1522-RBBP4 KIAA1522 chr1 33207790 + RBBP4 chr1 33133826 + Exonic hg19 OV TCGA-13-1483-01A 67 25 In-Frame Intra-chr p35.1 p35.1 Seq+ 40659 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-13-1483-01A 23 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40660 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-13-1483-01A 20 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40661 ChimerSeq STARFusion TCGA_RNA-Seq RPLP1-COL1A1 RPLP1 chr15 69745288 + COL1A1 chr17 48261716 - Exonic hg19 OV TCGA-13-1483-01A 5 7 Out-of-frame Inter-chr q23 q21.33 Oncogene 40662 ChimerSeq STARFusion TCGA_RNA-Seq DENND1A-PSMB7 DENND1A chr9 126692168 - PSMB7 chr9 127119194 - Exonic hg19 OV TCGA-24-2271-01A 21 4 Out-of-frame Intra-chr q33.3 q33.3 Seq+ 40663 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821632 - Exonic hg19 OV TCGA-24-2271-01A 8 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40664 ChimerSeq STARFusion TCGA_RNA-Seq FAM91A1-TRMT12 FAM91A1 chr8 124792782 + TRMT12 chr8 125474268 + Exonic hg19 OV TCGA-24-2271-01A 7 1 CDS-3'UTR Intra-chr q24.13 q24.13 Seq+ 40665 ChimerSeq STARFusion TCGA_RNA-Seq MECOM-LRRC31 MECOM chr3 169381124 - LRRC31 chr3 169574660 - Exonic hg19 OV TCGA-24-2271-01A 6 0 In-Frame Intra-chr q26.2 Transcription factor q26.2 Seq+ 40666 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF3-LINGO3 ARHGEF3 chr3 57069116 - LINGO3 chr19 2291821 - Exonic hg19 OV TCGA-24-2271-01A 4 2 CDS-5'UTR Inter-chr p14.3 p13.3 Seq+ 40667 ChimerSeq STARFusion TCGA_RNA-Seq BTBD10-COLEC10 BTBD10 chr11 13466571 - COLEC10 chr8 120101919 + Exonic hg19 OV TCGA-57-1584-01A 5 7 Out-of-frame Inter-chr p15.3 q24.12 Seq+ 40668 ChimerSeq STARFusion TCGA_RNA-Seq BTBD10-COLEC10 BTBD10 chr11 13484639 - COLEC10 chr8 120101919 + Exonic hg19 OV TCGA-57-1584-01A 4 7 5'UTR-CDS Inter-chr p15.3 q24.12 Seq+ 40669 ChimerSeq STARFusion TCGA_RNA-Seq SLC30A6-BRE SLC30A6 chr2 32400430 + BRE chr2 28460069 + Exonic hg19 OV TCGA-57-1583-01A 94 34 In-Frame Intra-chr p22.3 Seq+ 40670 ChimerSeq STARFusion TCGA_RNA-Seq THRA-GSDMA THRA chr17 38233861 + GSDMA chr17 38121936 + Exonic hg19 OV TCGA-57-1583-01A 22 9 CDS-5'UTR Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Seq+ 40671 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142481912 + KLK5 chr19 51447042 - Exonic hg19 OV TCGA-57-1583-01A 12 0 3'UTR-CDS Inter-chr q13.41 40672 ChimerSeq STARFusion TCGA_RNA-Seq THRA-GSDMA THRA chr17 38233191 + GSDMA chr17 38121936 + Exonic hg19 OV TCGA-57-1583-01A 9 9 CDS-5'UTR Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Seq+ 40673 ChimerSeq STARFusion TCGA_RNA-Seq ZNF235-ACTN4 ZNF235 chr19 44802961 - ACTN4 chr19 39191240 + Exonic hg19 OV TCGA-57-1583-01A 10 5 Out-of-frame Intra-chr q13.31 Transcription factor Seq+ 40674 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142471340 + KLK5 chr19 51447042 - Exonic hg19 OV TCGA-57-1583-01A 11 0 3'UTR-CDS Inter-chr q13.41 40675 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142460418 + KLK5 chr19 51447042 - Exonic hg19 OV TCGA-57-1583-01A 11 0 In-Frame Inter-chr q13.41 40676 ChimerSeq STARFusion TCGA_RNA-Seq THRA-GSDMA THRA chr17 38233861 + GSDMA chr17 38121740 + Exonic hg19 OV TCGA-57-1583-01A 5 9 CDS-5'UTR Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Seq+ 40677 ChimerSeq STARFusion TCGA_RNA-Seq LYN-TGS1 LYN chr8 56879456 + TGS1 chr8 56723440 + Exonic hg19 OV TCGA-24-1565-01A 29 5 In-Frame Intra-chr q12.1 TK:Src q12.1 Tumor suppressor gene 40678 ChimerSeq STARFusion TCGA_RNA-Seq EEF1A1P5-MTATP8P1 EEF1A1P5 chr9 135896041 + MTATP8P1 chr1 568942 + Exonic hg19 OV TCGA-24-1565-01A 14 2 Out-of-frame Inter-chr q34.13 p36.33 40679 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-24-1565-01A 13 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40680 ChimerSeq STARFusion TCGA_RNA-Seq SS18-UBE2I SS18 chr18 23632588 - UBE2I chr16 1376833 + Exonic hg19 OV TCGA-25-2393-01A 564 76 CDS-3'UTR Inter-chr q11.2 p13.3 Seq+ 40681 ChimerSeq STARFusion TCGA_RNA-Seq BEND7-PHYH BEND7 chr10 13568138 - PHYH chr10 13323110 - Exonic hg19 OV TCGA-25-2393-01A 136 12 5'UTR-CDS Intra-chr p13 p13 Seq+ 40682 ChimerSeq STARFusion TCGA_RNA-Seq HMGA2-HNRNPM HMGA2 chr12 66221867 + HNRNPM chr19 8520289 + Exonic hg19 OV TCGA-25-2393-01A 14 0 Out-of-frame Inter-chr q14.3 Transcription factor p13.2 Seq+ 40683 ChimerSeq STARFusion TCGA_RNA-Seq SCAF4-SLC7A9 SCAF4 chr21 33077736 - SLC7A9 chr19 33360678 - Exonic hg19 OV TCGA-25-2393-01A 10 2 CDS-5'UTR Inter-chr q22.11 q13.11 40684 ChimerSeq STARFusion TCGA_RNA-Seq GTF2I-PTPN12 GTF2I chr7 74173185 + PTPN12 chr7 77200395 + Exonic hg19 OV TCGA-25-2393-01A 10 0 3'UTR-CDS Intra-chr q11.23 Transcription factor q11.23 Tumor suppressor gene 40685 ChimerSeq STARFusion TCGA_RNA-Seq E2F3-RBM24 E2F3 chr6 20404063 + RBM24 chr6 17283036 + Exonic hg19 OV TCGA-25-2393-01A 9 1 In-Frame Intra-chr p22.3 Tumor suppressor gene Transcription factor p22.3 40686 ChimerSeq STARFusion TCGA_RNA-Seq NDC1-YIPF1 NDC1 chr1 54252831 - YIPF1 chr1 54325826 - Exonic hg19 OV TCGA-31-1956-01A 15 2 Out-of-frame Intra-chr p32.3 p32.3 Seq+ 40687 ChimerSeq STARFusion TCGA_RNA-Seq CHN2-SKAP2 CHN2 chr7 29234606 + SKAP2 chr7 26779583 - Exonic hg19 OV TCGA-31-1956-01A 14 0 In-Frame Intra-chr p14.3 p15.2 Seq+ 40688 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-31-1956-01A 7 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40689 ChimerSeq STARFusion TCGA_RNA-Seq EPS8-PLEKHA5 EPS8 chr12 15942095 - PLEKHA5 chr12 19489449 + Exonic hg19 OV TCGA-61-2102-01A 220 59 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 40690 ChimerSeq STARFusion TCGA_RNA-Seq MYO9B-ATP13A1 MYO9B chr19 17213367 + ATP13A1 chr19 19758337 - Exonic hg19 OV TCGA-61-2102-01A 20 18 In-Frame Intra-chr p13.11 p13.11 Seq+ 40691 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734944 - ZFHX3 chr16 72821631 - Exonic hg19 OV TCGA-61-2102-01A 21 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40692 ChimerSeq STARFusion TCGA_RNA-Seq MYO9B-ATP13A1 MYO9B chr19 17213367 + ATP13A1 chr19 19758568 - Exonic hg19 OV TCGA-61-2102-01A 11 18 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 40693 ChimerSeq STARFusion TCGA_RNA-Seq FBRSL1-GALNT9 FBRSL1 chr12 133067447 + GALNT9 chr12 132863016 - Exonic hg19 OV TCGA-61-2102-01A 12 6 Out-of-frame Intra-chr q24.33 q24.33 Seq+ 40694 ChimerSeq STARFusion TCGA_RNA-Seq FAM135A-LMO3 FAM135A chr6 71212494 + LMO3 chr12 16713472 - Exonic hg19 OV TCGA-61-2102-01A 11 5 Out-of-frame Inter-chr q13 p12.3 Seq+ 40695 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA5-SLCO1B1 PLEKHA5 chr12 19285384 + SLCO1B1 chr12 21325584 + Exonic hg19 OV TCGA-61-2102-01A 6 5 Out-of-frame Intra-chr p12.3 p12.1 Seq+ 40696 ChimerSeq STARFusion TCGA_RNA-Seq HOOK1-FGGY HOOK1 chr1 60301084 + FGGY chr1 60073475 + Exonic hg19 OV TCGA-61-2102-01A 5 1 In-Frame Intra-chr p32.1 p32.1 Seq+ 40697 ChimerSeq STARFusion TCGA_RNA-Seq RPS2-IGF2 RPS2 chr16 2014509 - IGF2 chr11 2160010 - Exonic hg19 OV TCGA-61-2102-01A 4 2 Out-of-frame Inter-chr p13.3 p15.5 Oncogene 40698 ChimerSeq STARFusion TCGA_RNA-Seq FLOT2-SUPT6H FLOT2 chr17 27224544 - SUPT6H chr17 27013357 + Exonic hg19 OV TCGA-29-1784-01A 40 3 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 40699 ChimerSeq STARFusion TCGA_RNA-Seq GPC1-RPL28 GPC1 chr2 241392439 + RPL28 chr19 55897716 + Exonic hg19 OV TCGA-29-1784-01A 18 0 Out-of-frame Inter-chr q37.3 q13.42 40700 ChimerSeq STARFusion TCGA_RNA-Seq EWSR1-AP1B1 EWSR1 chr22 29664338 + AP1B1 chr22 29819177 - Exonic hg19 OV TCGA-24-0968-01A 48 2 CDS-5'UTR Intra-chr q12.2 q12.2 Seq+ 40701 ChimerSeq STARFusion TCGA_RNA-Seq EWSR1-AP1B1 EWSR1 chr22 29664338 + AP1B1 chr22 29763259 - Exonic hg19 OV TCGA-24-0968-01A 47 2 CDS-5'UTR Intra-chr q12.2 q12.2 Seq+ 40702 ChimerSeq STARFusion TCGA_RNA-Seq LRCH3-SLC16A13 LRCH3 chr3 197518411 + SLC16A13 chr17 6943082 + Exonic hg19 OV TCGA-24-0968-01A 42 3 In-Frame Inter-chr q29 p13.1 Seq+ 40703 ChimerSeq STARFusion TCGA_RNA-Seq NPLOC4-RBPMS2 NPLOC4 chr17 79596751 - RBPMS2 chr15 65033441 - Exonic hg19 OV TCGA-24-0968-01A 40 5 In-Frame Inter-chr q25.3 q22.31 Seq+ 40704 ChimerSeq STARFusion TCGA_RNA-Seq GOLPH3L-THEM4 GOLPH3L chr1 150634290 - THEM4 chr1 151861849 - Exonic hg19 OV TCGA-24-0968-01A 20 2 In-Frame Intra-chr q21.3 q21.3 Seq+ 40705 ChimerSeq STARFusion TCGA_RNA-Seq EWSR1-EMID1 EWSR1 chr22 29669853 + EMID1 chr22 29650192 + Exonic hg19 OV TCGA-24-0968-01A 18 9 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 40706 ChimerSeq STARFusion TCGA_RNA-Seq SF3B3-DDX19B SF3B3 chr16 70595687 + DDX19B chr16 70351399 + Exonic hg19 OV TCGA-24-0968-01A 17 3 In-Frame Intra-chr q22.1 q22.1 Seq+ 40707 ChimerSeq STARFusion TCGA_RNA-Seq EWSR1-EMID1 EWSR1 chr22 29674205 + EMID1 chr22 29639434 + Exonic hg19 OV TCGA-24-0968-01A 15 9 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 40708 ChimerSeq STARFusion TCGA_RNA-Seq AREL1-TMED10 AREL1 chr14 75158744 - TMED10 chr14 75602589 - Exonic hg19 OV TCGA-24-0968-01A 9 2 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 40709 ChimerSeq STARFusion TCGA_RNA-Seq EWSR1-EMID1 EWSR1 chr22 29674205 + EMID1 chr22 29650192 + Exonic hg19 OV TCGA-24-0968-01A 6 9 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 40710 ChimerSeq STARFusion TCGA_RNA-Seq EWSR1-EMID1 EWSR1 chr22 29674205 + EMID1 chr22 29654806 + Exonic hg19 OV TCGA-24-0968-01A 4 9 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 40711 ChimerSeq STARFusion TCGA_RNA-Seq KPNA1-CCDC58 KPNA1 chr3 122233604 - CCDC58 chr3 122081874 - Exonic hg19 OV TCGA-04-1530-01A 37 5 5'UTR-CDS Intra-chr q21.1 q21.1 Seq+ 40712 ChimerSeq STARFusion TCGA_RNA-Seq VCL-ADK VCL chr10 75758133 + ADK chr10 76349040 + Exonic hg19 OV TCGA-04-1530-01A 15 2 In-Frame Intra-chr q22.2 q22.2 Seq+ 40713 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-RSBN1L PTPN12 chr7 77256992 + RSBN1L chr7 77365727 + Exonic hg19 OV TCGA-04-1530-01A 15 1 In-Frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 40714 ChimerSeq STARFusion TCGA_RNA-Seq KPNA1-CCDC58 KPNA1 chr3 122233722 - CCDC58 chr3 122081874 - Exonic hg19 OV TCGA-04-1530-01A 12 5 5'UTR-CDS Intra-chr q21.1 q21.1 Seq+ 40715 ChimerSeq STARFusion TCGA_RNA-Seq TENM4-ZDHHC18 TENM4 chr11 79151553 - ZDHHC18 chr1 27158938 + Exonic hg19 OV TCGA-04-1530-01A 12 0 Out-of-frame Inter-chr q14.1 p36.11 Seq+ 40716 ChimerSeq STARFusion TCGA_RNA-Seq CTDSPL2-B2M CTDSPL2 chr15 44751398 + B2M chr15 45007621 + Exonic hg19 OV TCGA-04-1530-01A 8 4 Out-of-frame Intra-chr q15.3 Oncogene 40717 ChimerSeq STARFusion TCGA_RNA-Seq SNRNP70-TIMM44 SNRNP70 chr19 49589818 + TIMM44 chr19 8006082 - Exonic hg19 OV TCGA-10-0926-01A 73 9 In-Frame Intra-chr q13.33 p13.2 Seq+ 40718 ChimerSeq STARFusion TCGA_RNA-Seq KDM4B-MPND KDM4B chr19 5082515 + MPND chr19 4345742 + Exonic hg19 OV TCGA-10-0926-01A 28 15 In-Frame Intra-chr p13.3 p13.3 Seq+ 40719 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469662 + FTH1P27 chrX 37364954 + Exonic hg19 OV TCGA-10-0926-01A 21 0 Out-of-frame Inter-chr q13.33 p21.1 40720 ChimerSeq STARFusion TCGA_RNA-Seq RAB11B-GEMIN7 RAB11B chr19 8455340 + GEMIN7 chr19 45593365 + Exonic hg19 OV TCGA-10-0926-01A 11 13 CDS-5'UTR Intra-chr p13.2 q13.32 Seq+ 40721 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821632 - Exonic hg19 OV TCGA-13-1499-01A 24 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40722 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076852 + IGH@ chr14 106209410 - Exonic hg19 OV TCGA-13-1499-01A 17 0 Out-of-frame Inter-chr q21.2 32.33 40723 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076852 + IGHG1 chr14 106209410 - Exonic hg19 OV TCGA-13-1499-01A 17 0 Out-of-frame Inter-chr q21.2 q32.33 40724 ChimerSeq STARFusion TCGA_RNA-Seq RPS20-IGF2 RPS20 chr8 56985617 - IGF2 chr11 2153823 - Exonic hg19 OV TCGA-13-1499-01A 14 12 Out-of-frame Inter-chr q12.1 p15.5 Oncogene 40725 ChimerSeq STARFusion TCGA_RNA-Seq RPS20-IGF2 RPS20 chr8 56985613 - IGF2 chr11 2153805 - Exonic hg19 OV TCGA-13-1499-01A 3 12 Out-of-frame Inter-chr q12.1 p15.5 Oncogene 40726 ChimerSeq STARFusion TCGA_RNA-Seq COL1A1-IGF2 COL1A1 chr17 48262644 - IGF2 chr11 2153809 - Exonic hg19 OV TCGA-13-1499-01A 3 11 Out-of-frame Inter-chr q21.33 Oncogene p15.5 Oncogene 40727 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD12-CCDC178 ANKRD12 chr18 9136963 + CCDC178 chr18 30554645 - Exonic hg19 OV TCGA-04-1651-01A 58 4 Out-of-frame Intra-chr p11.22 q12.1 Seq+ 40728 ChimerSeq STARFusion TCGA_RNA-Seq GOLPH3-ZFR GOLPH3 chr5 32173916 - ZFR chr5 32385755 - Exonic hg19 OV TCGA-04-1651-01A 37 2 In-Frame Intra-chr p13.3 p13.3 Seq+ 40729 ChimerSeq STARFusion TCGA_RNA-Seq PTPRG-BRD8 PTPRG chr3 61734656 + BRD8 chr5 137481567 - Exonic hg19 OV TCGA-04-1651-01A 14 1 Out-of-frame Inter-chr p14.2 q31.2 Seq+ 40730 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD12-CCDC178 ANKRD12 chr18 9137094 + CCDC178 chr18 30554645 - Exonic hg19 OV TCGA-04-1651-01A 10 4 Out-of-frame Intra-chr p11.22 q12.1 Seq+ 40731 ChimerSeq STARFusion TCGA_RNA-Seq PHF20-TOX2 PHF20 chr20 34435356 + TOX2 chr20 42679946 + Exonic hg19 OV TCGA-61-2098-01A 72 9 Out-of-frame Intra-chr q11.22 Transcription factor q13.12 Seq+ 40732 ChimerSeq STARFusion TCGA_RNA-Seq LINC00665-CDH4 LINC00665 chr19 36821155 - CDH4 chr20 60318619 + Exonic hg19 OV TCGA-61-2098-01A 27 12 Out-of-frame Inter-chr q13.12 q13.33 Tumor suppressor gene 40733 ChimerSeq STARFusion TCGA_RNA-Seq ITPR2-BHLHE41 ITPR2 chr12 26943090 - BHLHE41 chr12 26277515 - Exonic hg19 OV TCGA-61-2098-01A 26 8 Out-of-frame Intra-chr p11.23 p12.1 Tumor suppressor gene Transcription factor Seq+ 40734 ChimerSeq STARFusion TCGA_RNA-Seq MAP4K5-SOS2 MAP4K5 chr14 50998660 - SOS2 chr14 50628327 - Exonic hg19 OV TCGA-61-2098-01A 21 3 In-Frame Intra-chr q22.1 q21.3 Seq+ 40735 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734942 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-61-2098-01A 14 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40736 ChimerSeq STARFusion TCGA_RNA-Seq OSBP2-CHCHD3 OSBP2 chr22 31266669 + CHCHD3 chr7 132470421 - Exonic hg19 OV TCGA-24-1435-01A 48 2 In-Frame Inter-chr q12.2 q33 Transcription factor Seq+ 40737 ChimerSeq STARFusion TCGA_RNA-Seq SLC3A2-DLGAP4 SLC3A2 chr11 62623853 + DLGAP4 chr20 35152653 + Exonic hg19 OV TCGA-24-1435-01A 33 28 In-Frame Inter-chr q12.3 q11.23 Seq+ 40738 ChimerSeq STARFusion TCGA_RNA-Seq PGAM5-CCL28 PGAM5 chr12 133287653 + CCL28 chr5 43388578 - Exonic hg19 OV TCGA-24-1435-01A 26 9 Out-of-frame Inter-chr q24.33 p12 Seq+ 40739 ChimerSeq STARFusion TCGA_RNA-Seq TPSAB1-PRSS27 TPSAB1 chr16 1291991 + PRSS27 chr16 2762815 - Exonic hg19 OV TCGA-24-1435-01A 18 0 In-Frame Intra-chr p13.3 p13.3 40740 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-1435-01A 15 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40741 ChimerSeq STARFusion TCGA_RNA-Seq MAL2-COLEC10 MAL2 chr8 120220844 + COLEC10 chr8 120101919 + Exonic hg19 OV TCGA-24-1435-01A 12 3 Out-of-frame Intra-chr q24.12 q24.12 40742 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-61-1919-01A 31 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40743 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-61-1919-01A 29 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40744 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-61-1919-01A 24 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40745 ChimerSeq STARFusion TCGA_RNA-Seq MARK3-GLIS3 MARK3 chr14 103894777 + GLIS3 chr9 3856184 - Exonic hg19 OV TCGA-61-1919-01A 19 0 Out-of-frame Inter-chr q32.32 CAMK:CAMKL p24.2 Transcription factor Seq+ 40746 ChimerSeq STARFusion TCGA_RNA-Seq RPS17-SPP1 RPS17 chr15 82823332 - SPP1 chr4 88896869 + Exonic hg19 OV TCGA-61-1919-01A 10 2 Out-of-frame Inter-chr q25.2 q22.1 40747 ChimerSeq STARFusion TCGA_RNA-Seq KATNAL2-CABLES1 KATNAL2 chr18 44526886 + CABLES1 chr18 20768802 + Exonic hg19 OV TCGA-61-1919-01A 6 1 5'UTR-5'UTR Intra-chr q21.1 q11.2 Tumor suppressor gene 40748 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H12C-VPS52 ZC3H12C chr11 110008139 + VPS52 chr6 33232677 - Exonic hg19 OV TCGA-61-1919-01A 6 1 Out-of-frame Inter-chr q22.3 Seq+ 40749 ChimerSeq STARFusion TCGA_RNA-Seq FOXJ3-CCDC23 FOXJ3 chr1 42800730 - CCDC23 chr1 43282251 - Exonic hg19 OV TCGA-13-0890-01A 118 20 5'UTR-5'UTR Intra-chr p34.2 Transcription factor Seq+ 40750 ChimerSeq STARFusion TCGA_RNA-Seq UBE2C-DNTTIP1 UBE2C chr20 44444552 + DNTTIP1 chr20 44433785 + Exonic hg19 OV TCGA-13-0890-01A 26 4 Out-of-frame Intra-chr q13.12 q13.12 Transcription factor 40751 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-13-0890-01A 15 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40752 ChimerSeq STARFusion TCGA_RNA-Seq TMEM201-RBP7 TMEM201 chr1 9657111 + RBP7 chr1 10075840 + Exonic hg19 OV TCGA-13-0890-01A 12 6 In-Frame Intra-chr p36.22 p36.22 Seq+ 40753 ChimerSeq STARFusion TCGA_RNA-Seq SF1-CST6 SF1 chr11 64545834 - CST6 chr11 65779657 + Exonic hg19 OV TCGA-13-1489-01A 94 51 Out-of-frame Intra-chr q13.1 q13.1 Tumor suppressor gene Seq+ 40754 ChimerSeq STARFusion TCGA_RNA-Seq MAMSTR-RASIP1 MAMSTR chr19 49222231 - RASIP1 chr19 49230687 - Exonic hg19 OV TCGA-13-1489-01A 55 10 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 40755 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-13-1489-01A 47 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40756 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-13-1489-01A 15 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40757 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069803 - Exonic hg19 OV TCGA-13-1489-01A 13 0 Out-of-frame Inter-chr q12.3 q32.2 40758 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-13-1489-01A 13 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40759 ChimerSeq STARFusion TCGA_RNA-Seq YWHAH-DEPDC5 YWHAH chr22 32340806 + DEPDC5 chr22 32297728 + Exonic hg19 OV TCGA-23-1022-01A 59 17 Out-of-frame Intra-chr q12.3 q12.2 Seq+ 40760 ChimerSeq STARFusion TCGA_RNA-Seq YPEL1-MAPK1 YPEL1 chr22 22089904 - MAPK1 chr22 22162135 - Exonic hg19 OV TCGA-23-1022-01A 16 1 5'UTR-CDS Intra-chr q11.22 q11.22 Oncogene Seq+ 40761 ChimerSeq STARFusion TCGA_RNA-Seq RPPH1-CCNB1IP1 RPPH1 chr14 20811645 - CCNB1IP1 chr14 20797533 - Exonic hg19 OV TCGA-23-1022-01A 13 0 5'UTR-5'UTR Intra-chr q11.2 q11.2 40762 ChimerSeq STARFusion TCGA_RNA-Seq C15orf27-SMAD6 C15orf27 chr15 76452509 + SMAD6 chr15 67073335 + Exonic hg19 OV TCGA-23-1022-01A 11 3 Out-of-frame Intra-chr q22.31 Seq+ 40763 ChimerSeq STARFusion TCGA_RNA-Seq ARPC3-APAF1 ARPC3 chr12 110883257 - APAF1 chr12 99126198 + Exonic hg19 OV TCGA-23-1022-01A 11 2 In-Frame Intra-chr q24.11 q23.1 Tumor suppressor gene Seq+ 40764 ChimerSeq STARFusion TCGA_RNA-Seq HMGN2-WDTC1 HMGN2 chr1 26801158 + WDTC1 chr1 27614165 + Exonic hg19 OV TCGA-04-1337-01A 33 4 In-Frame Intra-chr p36.11 p36.11 Seq+ 40765 ChimerSeq STARFusion TCGA_RNA-Seq MGA-RTF1 MGA chr15 42028896 + RTF1 chr15 41730519 + Exonic hg19 OV TCGA-04-1337-01A 21 7 In-Frame Intra-chr q15.1 Transcription factor q15.1 Seq+ 40766 ChimerSeq STARFusion TCGA_RNA-Seq HSPG2-WNT4 HSPG2 chr1 22156486 - WNT4 chr1 22456344 - Exonic hg19 OV TCGA-04-1337-01A 17 13 Out-of-frame Intra-chr p36.12 p36.12 40767 ChimerSeq STARFusion TCGA_RNA-Seq MGA-RTF1 MGA chr15 42021547 + RTF1 chr15 41730519 + Exonic hg19 OV TCGA-04-1337-01A 9 7 In-Frame Intra-chr q15.1 Transcription factor q15.1 Seq+ 40768 ChimerSeq STARFusion TCGA_RNA-Seq MTND6P4-COL1A1 MTND6P4 chr5 134259923 + COL1A1 chr17 48266585 - Exonic hg19 OV TCGA-04-1337-01A 3 13 Out-of-frame Inter-chr q31.1 q21.33 Oncogene 40769 ChimerSeq STARFusion TCGA_RNA-Seq DERL1-C6orf132 DERL1 chr8 124054210 - C6orf132 chr6 42078029 - Exonic hg19 OV TCGA-24-1604-01A 49 33 In-Frame Inter-chr q24.13 p21.1 Seq+ 40770 ChimerSeq STARFusion TCGA_RNA-Seq CHD7-WHSC1L1 CHD7 chr8 61591641 + WHSC1L1 chr8 38162963 - Exonic hg19 OV TCGA-24-1604-01A 35 22 5'UTR-CDS Intra-chr q12.2 p11.23 Tumor suppressor gene Seq+ 40771 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-DUSP26 WHSC1L1 chr8 38162105 - DUSP26 chr8 33457283 - Exonic hg19 OV TCGA-24-1604-01A 22 15 CDS-5'UTR Intra-chr p11.23 Tumor suppressor gene p12 Tumor suppressor gene Seq+ 40772 ChimerSeq STARFusion TCGA_RNA-Seq ANK1-FUT10 ANK1 chr8 41553881 - FUT10 chr8 33247316 - Exonic hg19 OV TCGA-24-1604-01A 15 13 Out-of-frame Intra-chr p11.21 p12 Seq+ 40773 ChimerSeq STARFusion TCGA_RNA-Seq CHD7-WHSC1L1 CHD7 chr8 61592350 + WHSC1L1 chr8 38162963 - Exonic hg19 OV TCGA-24-1604-01A 9 22 5'UTR-CDS Intra-chr q12.2 p11.23 Tumor suppressor gene Seq+ 40774 ChimerSeq STARFusion TCGA_RNA-Seq CUL3-PCMTD1 CUL3 chr2 225449661 - PCMTD1 chr8 52758323 - Exonic hg19 OV TCGA-24-1604-01A 13 2 Out-of-frame Inter-chr q36.2 q11.23 Seq+ 40775 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-DUSP26 WHSC1L1 chr8 38162105 - DUSP26 chr8 33455106 - Exonic hg19 OV TCGA-24-1604-01A 5 15 CDS-5'UTR Intra-chr p11.23 Tumor suppressor gene p12 Tumor suppressor gene Seq+ 40776 ChimerSeq STARFusion TCGA_RNA-Seq CHD7-ANK1 CHD7 chr8 61721943 + ANK1 chr8 41583464 - Exonic hg19 OV TCGA-24-1604-01A 5 10 Out-of-frame Intra-chr q12.2 p11.21 Seq+ 40777 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-DUSP26 WHSC1L1 chr8 38162203 - DUSP26 chr8 33457283 - Exonic hg19 OV TCGA-24-1604-01A 3 15 Out-of-frame Intra-chr p11.23 Tumor suppressor gene p12 Tumor suppressor gene Seq+ 40778 ChimerSeq STARFusion TCGA_RNA-Seq ANK1-FUT10 ANK1 chr8 41553881 - FUT10 chr8 33230322 - Exonic hg19 OV TCGA-24-1604-01A 2 13 Out-of-frame Intra-chr p11.21 p12 Seq+ 40779 ChimerSeq STARFusion TCGA_RNA-Seq C19orf47-SCN1B C19orf47 chr19 40847746 - SCN1B chr19 35523432 + Exonic hg19 OV TCGA-25-1877-01A 84 5 In-Frame Intra-chr q13.2 q13.11 Seq+ 40780 ChimerSeq STARFusion TCGA_RNA-Seq UBA2-ZNF146 UBA2 chr19 34955036 + ZNF146 chr19 36726561 + Exonic hg19 OV TCGA-25-1877-01A 46 3 CDS-5'UTR Intra-chr q13.11 q13.12 Transcription factor Seq+ 40781 ChimerSeq STARFusion TCGA_RNA-Seq LINC00665-AXL LINC00665 chr19 36806859 - AXL chr19 41763398 + Exonic hg19 OV TCGA-25-1877-01A 32 3 Out-of-frame Intra-chr q13.12 q13.2 TK:Axl Oncogene 40782 ChimerSeq STARFusion TCGA_RNA-Seq FXYD5-HNRNPUL1 FXYD5 chr19 35648404 + HNRNPUL1 chr19 41774128 + Exonic hg19 OV TCGA-25-1877-01A 28 3 In-Frame Intra-chr q13.12 q13.2 Seq+ 40783 ChimerSeq STARFusion TCGA_RNA-Seq AXL-ZNF565 AXL chr19 41762516 + ZNF565 chr19 36686058 - Exonic hg19 OV TCGA-25-1877-01A 21 5 In-Frame Intra-chr q13.2 TK:Axl Oncogene q13.12 Transcription factor Seq+ 40784 ChimerSeq STARFusion TCGA_RNA-Seq PPIL2-TPTE PPIL2 chr22 22006620 + TPTE chr21 10973776 - Exonic hg19 OV TCGA-25-1877-01A 13 2 5'UTR-5'UTR Inter-chr q11.21 p11.2 40785 ChimerSeq STARFusion TCGA_RNA-Seq GOLIM4-SPATA16 GOLIM4 chr3 167812887 - SPATA16 chr3 172835539 - Exonic hg19 OV TCGA-25-1877-01A 12 0 CDS-5'UTR Intra-chr q26.2 q26.31 Seq+ 40786 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPUL1-IFNL4 HNRNPUL1 chr19 41768487 + IFNL4 chr19 39739227 - Exonic hg19 OV TCGA-25-1877-01A 10 0 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 40787 ChimerSeq STARFusion TCGA_RNA-Seq KRI1-DNM2 KRI1 chr19 10672343 - DNM2 chr19 10916592 + Exonic hg19 OV TCGA-25-1626-01A 28 17 In-Frame Intra-chr p13.2 p13.2 Seq+ 40788 ChimerSeq STARFusion TCGA_RNA-Seq IDH2-ZNF710 IDH2 chr15 90645508 - ZNF710 chr15 90610342 + Exonic hg19 OV TCGA-25-1626-01A 14 0 CDS-5'UTR Intra-chr q26.1 Oncogene q26.1 Transcription factor Seq+ 40789 ChimerSeq STARFusion TCGA_RNA-Seq FKRP-TAC4 FKRP chr19 47251920 + TAC4 chr17 47921521 - Exonic hg19 OV TCGA-25-1626-01A 6 4 Out-of-frame Inter-chr q13.32 q21.33 Seq+ 40790 ChimerSeq STARFusion TCGA_RNA-Seq CHL1-RAD18 CHL1 chr3 440831 + RAD18 chr3 8817350 - Exonic hg19 OV TCGA-09-1665-01B 19 13 CDS-3'UTR Intra-chr p26.3 p25.3 Seq+ 40791 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L4A-REEP5 EPB41L4A chr5 111519713 - REEP5 chr5 112238215 - Exonic hg19 OV TCGA-09-1665-01B 20 5 In-Frame Intra-chr q22.2 q22.2 Seq+ 40792 ChimerSeq STARFusion TCGA_RNA-Seq ZNF816-EVI5L ZNF816 chr19 53445794 - EVI5L chr19 7927858 + Exonic hg19 OV TCGA-09-1665-01B 19 1 3'UTR-CDS Intra-chr q13.41 Transcription factor p13.2 40793 ChimerSeq STARFusion TCGA_RNA-Seq PFKFB4-TMEM89 PFKFB4 chr3 48588120 - TMEM89 chr3 48658965 - Exonic hg19 OV TCGA-09-1665-01B 16 5 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 40794 ChimerSeq STARFusion TCGA_RNA-Seq RERE-ENO1 RERE chr1 8877219 - ENO1 chr1 8934976 - Exonic hg19 OV TCGA-09-1665-01B 15 6 5'UTR-5'UTR Intra-chr p36.23 p36.23 Seq+ 40795 ChimerSeq STARFusion TCGA_RNA-Seq NADK2-FOXP1 NADK2 chr5 36227579 - FOXP1 chr3 71247543 - Exonic hg19 OV TCGA-09-1665-01B 15 5 Out-of-frame Inter-chr p13.2 p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 40796 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF3-PREPL ZNRF3 chr22 29280054 + PREPL chr2 44556251 - Exonic hg19 OV TCGA-09-1665-01B 13 2 In-Frame Inter-chr q12.1 p21 Seq+ 40797 ChimerSeq STARFusion TCGA_RNA-Seq CHL1-RAD18 CHL1 chr3 440831 + RAD18 chr3 8844488 - Exonic hg19 OV TCGA-09-1665-01B 3 13 CDS-3'UTR Intra-chr p26.3 p25.3 Seq+ 40798 ChimerSeq STARFusion TCGA_RNA-Seq DPY19L4-SNTG1 DPY19L4 chr8 95738669 + SNTG1 chr8 51705231 + Exonic hg19 OV TCGA-24-2035-01A 25 3 Out-of-frame Intra-chr q22.1 q11.21 Seq+ 40799 ChimerSeq STARFusion TCGA_RNA-Seq DLD-BCAP29 DLD chr7 107546813 + BCAP29 chr7 107240842 + Exonic hg19 OV TCGA-24-2035-01A 18 2 In-Frame Intra-chr q31.1 Seq+ 40800 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106209411 - Exonic hg19 OV TCGA-04-1343-01A 36 0 Out-of-frame Inter-chr q21.2 32.33 40801 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076851 + IGHG1 chr14 106209411 - Exonic hg19 OV TCGA-04-1343-01A 36 0 Out-of-frame Inter-chr q21.2 q32.33 40802 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106237746 - Exonic hg19 OV TCGA-04-1343-01A 16 0 Out-of-frame Inter-chr q21.2 32.33 40803 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076857 + IGH@ chr14 106237740 - Exonic hg19 OV TCGA-04-1343-01A 13 0 Out-of-frame Inter-chr q21.2 32.33 40804 ChimerSeq STARFusion TCGA_RNA-Seq UBE2D2-CXXC5 UBE2D2 chr5 138941400 + CXXC5 chr5 139059949 + Exonic hg19 OV TCGA-04-1343-01A 13 0 5'UTR-5'UTR Intra-chr q31.2 q31.2 Tumor suppressor gene Transcription factor Seq+ 40805 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069803 - Exonic hg19 OV TCGA-04-1343-01A 12 0 Out-of-frame Inter-chr q12.3 q32.2 40806 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-04-1343-01A 12 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40807 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC1-MAP4 SMARCC1 chr3 47814307 - MAP4 chr3 47899002 - Exonic hg19 OV TCGA-61-1995-01A 12 2 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 40808 ChimerSeq STARFusion TCGA_RNA-Seq APBB3-TMEM163 APBB3 chr5 139973238 - TMEM163 chr2 135309662 - Exonic hg19 OV TCGA-61-1995-01A 11 3 5'UTR-CDS Inter-chr q31.3 q21.3 40809 ChimerSeq STARFusion TCGA_RNA-Seq SAFB-RFX2 SAFB chr19 5626500 + RFX2 chr19 6047515 - Exonic hg19 OV TCGA-OY-A56P-01A 42 11 5'UTR-5'UTR Intra-chr p13.3 Tumor suppressor gene Transcription factor p13.3 Transcription factor Seq+ 40810 ChimerSeq STARFusion TCGA_RNA-Seq ETNK1-MYO9B ETNK1 chr12 22778520 + MYO9B chr19 17298744 + Exonic hg19 OV TCGA-OY-A56P-01A 37 17 In-Frame Inter-chr p12.1 p13.11 Seq+ 40811 ChimerSeq STARFusion TCGA_RNA-Seq ANO6-PKP2 ANO6 chr12 45771896 + PKP2 chr12 32955490 - Exonic hg19 OV TCGA-OY-A56P-01A 18 4 Out-of-frame Intra-chr q12 p11.21 Seq+ 40812 ChimerSeq STARFusion TCGA_RNA-Seq SOGA1-GPI SOGA1 chr20 35421652 - GPI chr19 34884153 + Exonic hg19 OV TCGA-OY-A56P-01A 14 2 In-Frame Inter-chr q11.23 Seq+ 40813 ChimerSeq STARFusion TCGA_RNA-Seq HECTD4-HSPB8 HECTD4 chr12 112628590 - HSPB8 chr12 119624830 + Exonic hg19 OV TCGA-OY-A56P-01A 10 9 Out-of-frame Intra-chr q24.13 q24.23 Seq+ 40814 ChimerSeq STARFusion TCGA_RNA-Seq SBNO1-DDX55 SBNO1 chr12 123789129 - DDX55 chr12 124099732 + Exonic hg19 OV TCGA-OY-A56P-01A 10 6 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 40815 ChimerSeq STARFusion TCGA_RNA-Seq FGFR2-USP10 FGFR2 chr10 123353223 - USP10 chr16 84792322 + Exonic hg19 OV TCGA-24-1424-01A 257 84 In-Frame Inter-chr q26.13 TK:FGFR Oncogene q24.1 Seq+ 40816 ChimerSeq STARFusion TCGA_RNA-Seq USP18-BAG6 USP18 chr22 18640587 + BAG6 chr6 31607003 - Exonic hg19 OV TCGA-24-1424-01A 69 15 Out-of-frame Inter-chr q11.21 p21.33 Seq+ 40817 ChimerSeq STARFusion TCGA_RNA-Seq PPP1CB-PLB1 PPP1CB chr2 28975042 + PLB1 chr2 28808628 + Exonic hg19 OV TCGA-24-1424-01A 66 23 Out-of-frame Intra-chr p23.2 p23.2 Seq+ 40818 ChimerSeq STARFusion TCGA_RNA-Seq NUPL2-EPCAM NUPL2 chr7 23221825 + EPCAM chr2 47604153 + Exonic hg19 OV TCGA-24-1424-01A 56 49 Out-of-frame Inter-chr p15.3 p21 Seq+ 40819 ChimerSeq STARFusion TCGA_RNA-Seq MBOAT2-YWHAE MBOAT2 chr2 9143669 - YWHAE chr17 1257641 - Exonic hg19 OV TCGA-24-1424-01A 55 38 Out-of-frame Inter-chr p25.1 p13.3 Seq+ 40820 ChimerSeq STARFusion TCGA_RNA-Seq ZNF675-DNAH17 ZNF675 chr19 23869833 - DNAH17 chr17 76503887 - Exonic hg19 OV TCGA-24-1424-01A 57 11 In-Frame Inter-chr p12 Transcription factor q25.3 Seq+ 40821 ChimerSeq STARFusion TCGA_RNA-Seq DNAH17-NCAN DNAH17 chr17 76503360 - NCAN chr19 19327756 + Exonic hg19 OV TCGA-24-1424-01A 43 31 CDS-5'UTR Inter-chr q25.3 p13.11 Seq+ 40822 ChimerSeq STARFusion TCGA_RNA-Seq TAX1BP1-JAZF1 TAX1BP1 chr7 27797752 + JAZF1 chr7 28031600 - Exonic hg19 OV TCGA-24-1424-01A 47 10 In-Frame Intra-chr p15.2 p15.1 Transcription factor Seq+ 40823 ChimerSeq STARFusion TCGA_RNA-Seq AGRN-NDUFS5 AGRN chr1 970704 + NDUFS5 chr1 39494395 + Exonic hg19 OV TCGA-24-1424-01A 40 16 CDS-5'UTR Intra-chr p36.33 p34.3 Seq+ 40824 ChimerSeq STARFusion TCGA_RNA-Seq GPATCH8-MYO1D GPATCH8 chr17 42580694 - MYO1D chr17 30821933 - Exonic hg19 OV TCGA-24-1424-01A 37 18 Out-of-frame Intra-chr q21.31 q11.2 Seq+ 40825 ChimerSeq STARFusion TCGA_RNA-Seq HELZ-RBFOX3 HELZ chr17 65212015 - RBFOX3 chr17 77478680 - Exonic hg19 OV TCGA-24-1424-01A 33 7 CDS-5'UTR Intra-chr q24.2 q25.3 Seq+ 40826 ChimerSeq STARFusion TCGA_RNA-Seq MBOAT2-YWHAE MBOAT2 chr2 9143669 - YWHAE chr17 1248793 - Exonic hg19 OV TCGA-24-1424-01A 28 24 Out-of-frame Inter-chr p25.1 p13.3 Seq+ 40827 ChimerSeq STARFusion TCGA_RNA-Seq ZNF234-CEACAM20 ZNF234 chr19 44654658 + CEACAM20 chr19 45029277 - Exonic hg19 OV TCGA-24-1424-01A 20 8 In-Frame Intra-chr q13.31 Transcription factor q13.31 Seq+ 40828 ChimerSeq STARFusion TCGA_RNA-Seq NUPL2-EPCAM NUPL2 chr7 23221825 + EPCAM chr2 47606092 + Exonic hg19 OV TCGA-24-1424-01A 8 49 Out-of-frame Inter-chr p15.3 p21 Seq+ 40829 ChimerSeq STARFusion TCGA_RNA-Seq DNAH17-NCAN DNAH17 chr17 76502802 - NCAN chr19 19327756 + Exonic hg19 OV TCGA-24-1424-01A 11 31 CDS-5'UTR Inter-chr q25.3 p13.11 Seq+ 40830 ChimerSeq STARFusion TCGA_RNA-Seq ZMIZ1-C10orf107 ZMIZ1 chr10 80921890 + C10orf107 chr10 63445799 + Exonic hg19 OV TCGA-24-1424-01A 14 9 5'UTR-CDS Intra-chr q22.3 q21.2 Seq+ 40831 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC17-NDP ZCCHC17 chr1 31821821 + NDP chrX 43818098 - Exonic hg19 OV TCGA-24-1424-01A 15 3 CDS-5'UTR Inter-chr p35.2 p11.3 Seq+ 40832 ChimerSeq STARFusion TCGA_RNA-Seq KDM6A-YEATS4 KDM6A chrX 44920664 + YEATS4 chr12 69783927 + Exonic hg19 OV TCGA-13-0901-01B 126 24 Out-of-frame Inter-chr p11.3 Oncogene Tumor suppressor gene q15 Seq+ 40833 ChimerSeq STARFusion TCGA_RNA-Seq ZNF721-CPLX1 ZNF721 chr4 492845 - CPLX1 chr4 818389 - Exonic hg19 OV TCGA-13-0901-01B 34 12 5'UTR-5'UTR Intra-chr p16.3 Transcription factor p16.3 Seq+ 40834 ChimerSeq STARFusion TCGA_RNA-Seq NUP214-SEC14L2 NUP214 chr9 134010613 + SEC14L2 chr22 30818284 + Exonic hg19 OV TCGA-13-0901-01B 27 0 Out-of-frame Inter-chr q34.13 Oncogene q12.2 Tumor suppressor gene Seq+ 40835 ChimerSeq STARFusion TCGA_RNA-Seq RPS14-GAPDH RPS14 chr5 149826365 - GAPDH chr12 6647331 + Exonic hg19 OV TCGA-13-0901-01B 11 0 In-Frame Inter-chr q33.1 p13.31 40836 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-1105-01A 136 1 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40837 ChimerSeq STARFusion TCGA_RNA-Seq TSNARE1-LY6D TSNARE1 chr8 143484465 - LY6D chr8 143867103 - Exonic hg19 OV TCGA-24-1105-01A 86 14 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 40838 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-24-1105-01A 68 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40839 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069803 - Exonic hg19 OV TCGA-24-1105-01A 46 0 Out-of-frame Inter-chr q12.3 q32.2 40840 ChimerSeq STARFusion TCGA_RNA-Seq RNF41-MYO1C RNF41 chr12 56610213 - MYO1C chr17 1385852 - Exonic hg19 OV TCGA-24-1105-01A 38 16 5'UTR-CDS Inter-chr q13.3 p13.3 Seq+ 40841 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-24-1105-01A 32 1 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40842 ChimerSeq STARFusion TCGA_RNA-Seq BEST1-KIAA1217 BEST1 chr11 61734934 + KIAA1217 chr10 24497865 + Exonic hg19 OV TCGA-24-1105-01A 14 0 Out-of-frame Inter-chr q12.3 p12.2 40843 ChimerSeq STARFusion TCGA_RNA-Seq TSNARE1-LY6D TSNARE1 chr8 143447272 - LY6D chr8 143867103 - Exonic hg19 OV TCGA-24-1105-01A 10 14 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 40844 ChimerSeq STARFusion TCGA_RNA-Seq DOC2B-CCDC91 DOC2B chr17 30898 - CCDC91 chr12 28286185 + Exonic hg19 OV TCGA-24-1105-01A 12 3 CDS-5'UTR Inter-chr p11.22 40845 ChimerSeq STARFusion TCGA_RNA-Seq MARCH6-UVRAG 2019_ 3_ 6_ chr5 10411649 + UVRAG chr11 75826968 + Exonic hg19 OV TCGA-24-1930-01A 56 4 Out-of-frame Inter-chr p15.2 q13.5 Tumor suppressor gene Seq+ 40846 ChimerSeq STARFusion TCGA_RNA-Seq RHOG-STIM1 RHOG chr11 3862124 - STIM1 chr11 3988782 + Exonic hg19 OV TCGA-24-1930-01A 39 2 5'UTR-CDS Intra-chr p15.4 p15.4 Seq+ 40847 ChimerSeq STARFusion TCGA_RNA-Seq DYNLRB1-RALY DYNLRB1 chr20 33114148 + RALY chr20 32667716 + Exonic hg19 OV TCGA-24-1930-01A 31 0 CDS-3'UTR Intra-chr q11.22 q11.22 Seq+ 40848 ChimerSeq STARFusion TCGA_RNA-Seq TNS3-PKD1L1 TNS3 chr7 47622025 - PKD1L1 chr7 47840477 - Exonic hg19 OV TCGA-24-1930-01A 12 2 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 40849 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A25-CIZ1 SLC25A25 chr9 130830859 + CIZ1 chr9 130932386 - Exonic hg19 OV TCGA-24-2293-01A 40 13 Out-of-frame Intra-chr q34.11 q34.11 Tumor suppressor gene Seq+ 40850 ChimerSeq STARFusion TCGA_RNA-Seq PACS1-POLA2 PACS1 chr11 65838313 + POLA2 chr11 65055187 + Exonic hg19 OV TCGA-24-2293-01A 17 7 Out-of-frame Intra-chr q13.1 q13.1 40851 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC1-SPINK8 SMARCC1 chr3 47721927 - SPINK8 chr3 48351436 - Exonic hg19 OV TCGA-24-2293-01A 17 2 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 40852 ChimerSeq STARFusion TCGA_RNA-Seq PPP4R4-UNC79 PPP4R4 chr14 94642464 + UNC79 chr14 94155011 + Exonic hg19 OV TCGA-24-2293-01A 14 7 Out-of-frame Intra-chr q32.12 Seq+ 40853 ChimerSeq STARFusion TCGA_RNA-Seq PPP4R4-UNC79 PPP4R4 chr14 94642464 + UNC79 chr14 94170971 + Exonic hg19 OV TCGA-24-2293-01A 13 7 Out-of-frame Intra-chr q32.12 Seq+ 40854 ChimerSeq STARFusion TCGA_RNA-Seq SRGAP3-PTTG1 SRGAP3 chr3 9290569 - PTTG1 chr5 159849309 + Exonic hg19 OV TCGA-13-0885-01A 31 5 CDS-5'UTR Inter-chr p25.3 Tumor suppressor gene q33.3 Seq+ 40855 ChimerSeq STARFusion TCGA_RNA-Seq CNOT1-CETP CNOT1 chr16 58663632 - CETP chr16 57003298 + Exonic hg19 OV TCGA-13-0885-01A 22 10 5'UTR-CDS Intra-chr q21 q13 Seq+ 40856 ChimerSeq STARFusion TCGA_RNA-Seq EDC3-COX5A EDC3 chr15 74967302 - COX5A chr15 75230377 - Exonic hg19 OV TCGA-13-0885-01A 21 7 CDS-5'UTR Intra-chr q24.1 q24.2 Seq+ 40857 ChimerSeq STARFusion TCGA_RNA-Seq CNOT1-CETP CNOT1 chr16 58663632 - CETP chr16 56977894 + Exonic hg19 OV TCGA-13-0885-01A 7 10 5'UTR-5'UTR Intra-chr q21 q13 Seq+ 40858 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2-PSMA5 NOTCH2 chr1 120611948 - PSMA5 chr1 109964548 - Exonic hg19 OV TCGA-36-1574-01A 91 89 Out-of-frame Intra-chr p12 Oncogene Tumor suppressor gene p13.3 Seq+ 40859 ChimerSeq STARFusion TCGA_RNA-Seq EZH1-ZC3H3 EZH1 chr17 40880843 - ZC3H3 chr8 144523290 - Exonic hg19 OV TCGA-36-1574-01A 90 58 In-Frame Inter-chr q21.2 Tumor suppressor gene Seq+ 40860 ChimerSeq STARFusion TCGA_RNA-Seq FRMD8-SLC22A20 FRMD8 chr11 65172539 + SLC22A20 chr11 65003880 + Exonic hg19 OV TCGA-36-1574-01A 35 25 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 40861 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2-PSMA5 NOTCH2 chr1 120611948 - PSMA5 chr1 109957985 - Exonic hg19 OV TCGA-36-1574-01A 21 64 Out-of-frame Intra-chr p12 Oncogene Tumor suppressor gene p13.3 Seq+ 40862 ChimerSeq STARFusion TCGA_RNA-Seq DDX60L-DSCAM DDX60L chr4 169374275 - DSCAM chr21 41559914 - Exonic hg19 OV TCGA-36-1574-01A 31 22 In-Frame Inter-chr q32.3 q22.2 Seq+ 40863 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1E-KDELR3 CSNK1E chr22 38776375 - KDELR3 chr22 38870528 + Exonic hg19 OV TCGA-36-1574-01A 31 16 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 40864 ChimerSeq STARFusion TCGA_RNA-Seq LARGE-OPA3 LARGE chr22 33960834 - OPA3 chr19 46057169 - Exonic hg19 OV TCGA-36-1574-01A 27 12 In-Frame Inter-chr q13.32 Seq+ 40865 ChimerSeq STARFusion TCGA_RNA-Seq HECTD1-HEATR5A HECTD1 chr14 31675003 - HEATR5A chr14 31782396 - Exonic hg19 OV TCGA-36-1574-01A 21 4 Out-of-frame Intra-chr q12 q12 Seq+ 40866 ChimerSeq STARFusion TCGA_RNA-Seq UBA2-GPI UBA2 chr19 34925873 + GPI chr19 34887206 + Exonic hg19 OV TCGA-36-1574-01A 7 3 In-Frame Intra-chr q13.11 Seq+ 40867 ChimerSeq STARFusion TCGA_RNA-Seq LARGE-OPA3 LARGE chr22 33960834 - OPA3 chr19 46032714 - Exonic hg19 OV TCGA-36-1574-01A 4 12 In-Frame Inter-chr q13.32 Seq+ 40868 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821632 - Exonic hg19 OV TCGA-24-1422-01A 16 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40869 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890980 - BCAR4 chr16 11914154 - Exonic hg19 OV TCGA-24-1422-01A 14 7 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 40870 ChimerSeq STARFusion TCGA_RNA-Seq ANP32E-CTSK ANP32E chr1 150202906 - CTSK chr1 150769374 - Exonic hg19 OV TCGA-61-1918-01A 45 9 Out-of-frame Intra-chr q21.2 q21.3 Seq+ 40871 ChimerSeq STARFusion TCGA_RNA-Seq CPSF7-BSCL2 CPSF7 chr11 61196654 - BSCL2 chr11 62470021 - Exonic hg19 OV TCGA-61-1918-01A 29 2 Out-of-frame Intra-chr q12.2 q12.3 Seq+ 40872 ChimerSeq STARFusion TCGA_RNA-Seq SNX27-CDKN3 SNX27 chr1 151584988 + CDKN3 chr14 54882617 + Exonic hg19 OV TCGA-61-1918-01A 24 11 In-Frame Inter-chr q21.3 q22.2 Seq+ 40873 ChimerSeq STARFusion TCGA_RNA-Seq CASZ1-FBXO2 CASZ1 chr1 10765549 - FBXO2 chr1 11710891 - Exonic hg19 OV TCGA-61-1918-01A 21 7 5'UTR-CDS Intra-chr p36.22 Transcription factor p36.22 Seq+ 40874 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2NL-UBE2Q1 NOTCH2NL chr1 145209436 + UBE2Q1 chr1 154528440 - Exonic hg19 OV TCGA-61-1918-01A 18 0 5'UTR-CDS Intra-chr q21.1 q21.3 40875 ChimerSeq STARFusion TCGA_RNA-Seq CRADD-MRPL42 CRADD chr12 94072848 + MRPL42 chr12 93894952 + Exonic hg19 OV TCGA-61-1918-01A 15 2 Out-of-frame Intra-chr q22 q22 Seq+ 40876 ChimerSeq STARFusion TCGA_RNA-Seq HDLBP-THAP4 HDLBP chr2 242174536 - THAP4 chr2 242524140 - Exonic hg19 OV TCGA-61-1918-01A 10 2 In-Frame Intra-chr q37.3 q37.3 Transcription factor 40877 ChimerSeq STARFusion TCGA_RNA-Seq FAM131B-GIPC1 FAM131B chr7 143059853 - GIPC1 chr19 14603727 - Exonic hg19 OV TCGA-61-1918-01A 9 0 Out-of-frame Inter-chr q34 p13.12 40878 ChimerSeq STARFusion TCGA_RNA-Seq MAGI1-SUCLG2 MAGI1 chr3 66023671 - SUCLG2 chr3 67579610 - Exonic hg19 OV TCGA-61-1918-01A 8 1 In-Frame Intra-chr Oncogene p14.1 Seq+ 40879 ChimerSeq STARFusion TCGA_RNA-Seq TCF7L2-EIF3D TCF7L2 chr10 114799885 + EIF3D chr22 36922178 - Exonic hg19 OV TCGA-61-1918-01A 8 0 CDS-5'UTR Inter-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q12.3 Seq+ 40880 ChimerSeq STARFusion TCGA_RNA-Seq NUDT19-LSM14A NUDT19 chr19 33183580 + LSM14A chr19 34685383 + Exonic hg19 OV TCGA-61-1918-01A 7 1 Out-of-frame Intra-chr q13.11 Seq+ 40881 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0319L-TPMT KIAA0319L chr1 36019951 - TPMT chr6 18149402 - Exonic hg19 OV TCGA-61-1918-01A 6 2 CDS-5'UTR Inter-chr p34.3 p22.3 Seq+ 40882 ChimerSeq STARFusion TCGA_RNA-Seq NOXO1-ECI1 NOXO1 chr16 2029247 - ECI1 chr16 2296987 - Exonic hg19 OV TCGA-61-1918-01A 6 2 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 40883 ChimerSeq STARFusion TCGA_RNA-Seq SNX27-CDKN3 SNX27 chr1 151584988 + CDKN3 chr14 54884566 + Exonic hg19 OV TCGA-61-1918-01A 3 11 Out-of-frame Inter-chr q21.3 q22.2 Seq+ 40884 ChimerSeq STARFusion TCGA_RNA-Seq CCDC102A-CNGB1 CCDC102A chr16 57570412 - CNGB1 chr16 57989272 - Exonic hg19 OV TCGA-61-1918-01A 4 4 5'UTR-CDS Intra-chr q21 q21 Seq+ 40885 ChimerSeq STARFusion TCGA_RNA-Seq LIN9-OR4F17 LIN9 chr1 226483543 - OR4F17 chr19 110625 + Exonic hg19 OV TCGA-13-0900-01B 86 9 CDS-5'UTR Inter-chr q42.12 Tumor suppressor gene p13.3 40886 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF3-EWSR1 ZNRF3 chr22 29383189 + EWSR1 chr22 29669730 + Exonic hg19 OV TCGA-13-0900-01B 49 18 In-Frame Intra-chr q12.1 q12.2 Seq+ 40887 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-13-0900-01B 22 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40888 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-LRP5 PPP6R3 chr11 68228295 + LRP5 chr11 68190957 + Exonic hg19 OV TCGA-13-0900-01B 18 11 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 40889 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-PF4 RCC1 chr1 28834672 + PF4 chr4 74847862 - Exonic hg19 OV TCGA-13-0900-01B 19 0 5'UTR-5'UTR Inter-chr p35.3 q13.3 Tumor suppressor gene 40890 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-PF4 SNHG3 chr1 28834672 + PF4 chr4 74847862 - Exonic hg19 OV TCGA-13-0900-01B 19 0 5'UTR-5'UTR Inter-chr p35.3 q13.3 Tumor suppressor gene 40891 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF3-EWSR1 ZNRF3 chr22 29383189 + EWSR1 chr22 29669727 + Exonic hg19 OV TCGA-13-0900-01B 10 18 Out-of-frame Intra-chr q12.1 q12.2 Seq+ 40892 ChimerSeq STARFusion TCGA_RNA-Seq RPL41-IGFBP2 RPL41 chr12 56510582 + IGFBP2 chr2 217498140 + Exonic hg19 OV TCGA-13-0900-01B 13 0 Out-of-frame Inter-chr q13.2 q35 40893 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-LRP5 PPP6R3 chr11 68228295 + LRP5 chr11 68192570 + Exonic hg19 OV TCGA-13-0900-01B 8 11 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 40894 ChimerSeq STARFusion TCGA_RNA-Seq DIDO1-LRRC4B DIDO1 chr20 61542542 - LRRC4B chr19 51022672 - Exonic hg19 OV TCGA-25-1313-01A 31 9 Out-of-frame Inter-chr q13.33 Tumor suppressor gene q13.33 Seq+ 40895 ChimerSeq STARFusion TCGA_RNA-Seq ZNF433-DNAH17 ZNF433 chr19 12146352 - DNAH17 chr17 76547720 - Exonic hg19 OV TCGA-25-1313-01A 24 17 Out-of-frame Inter-chr p13.2 Transcription factor q25.3 Seq+ 40896 ChimerSeq STARFusion TCGA_RNA-Seq TTLL11-VWCE TTLL11 chr9 124801551 - VWCE chr11 61050377 - Exonic hg19 OV TCGA-25-1313-01A 18 4 In-Frame Inter-chr q33.2 q12.2 Seq+ 40897 ChimerSeq STARFusion TCGA_RNA-Seq LPIN2-TRAT1 LPIN2 chr18 3013085 - TRAT1 chr3 108565915 + Exonic hg19 OV TCGA-25-1313-01A 16 4 5'UTR-CDS Inter-chr p11.31 q13.13 Seq+ 40898 ChimerSeq STARFusion TCGA_RNA-Seq ZNF433-DNAH17 ZNF433 chr19 12145643 - DNAH17 chr17 76547720 - Exonic hg19 OV TCGA-25-1313-01A 12 17 Out-of-frame Inter-chr p13.2 Transcription factor q25.3 Seq+ 40899 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-25-1313-01A 13 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40900 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-25-1313-01A 9 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40901 ChimerSeq STARFusion TCGA_RNA-Seq RPS17-SPP1 RPS17 chr15 82823337 - SPP1 chr4 88896865 + Exonic hg19 OV TCGA-25-1313-01A 4 9 Out-of-frame Inter-chr q25.2 q22.1 40902 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-TRAPPC9 AGO2 chr8 141595218 - TRAPPC9 chr8 141301177 - Exonic hg19 OV TCGA-29-1705-01A 53 6 Out-of-frame Intra-chr q24.3 q24.3 40903 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61612311 - ANK3 chr10 62039397 - Exonic hg19 OV TCGA-29-1705-01A 37 3 In-Frame Intra-chr q21.2 q21.2 Seq+ 40904 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-29-1705-01A 11 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40905 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-MUCL1 WHSC1L1 chr8 38239317 - MUCL1 chr12 55248900 + Exonic hg19 OV TCGA-29-1702-01A 161 68 5'UTR-CDS Inter-chr p11.23 Tumor suppressor gene q13.2 Seq+ 40906 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC17-ANO4 ZDHHC17 chr12 77158109 + ANO4 chr12 101295424 + Exonic hg19 OV TCGA-29-1702-01A 125 19 CDS-5'UTR Intra-chr q21.2 q23.1 Seq+ 40907 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-MUCL1 WHSC1L1 chr8 38239317 - MUCL1 chr12 55250554 + Exonic hg19 OV TCGA-29-1702-01A 102 68 5'UTR-CDS Inter-chr p11.23 Tumor suppressor gene q13.2 Seq+ 40908 ChimerSeq STARFusion TCGA_RNA-Seq CHP1-SMAD3 CHP1 chr15 41555081 + SMAD3 chr15 67482751 + Exonic hg19 OV TCGA-29-1702-01A 112 19 Out-of-frame Intra-chr q15.1 q22.33 Transcription factor Seq+ 40909 ChimerSeq STARFusion TCGA_RNA-Seq PAFAH1B1-SMYD4 PAFAH1B1 chr17 2497300 + SMYD4 chr17 1731300 - Exonic hg19 OV TCGA-29-1702-01A 83 21 5'UTR-5'UTR Intra-chr p13.3 Tumor suppressor gene p13.3 Tumor suppressor gene Seq+ 40910 ChimerSeq STARFusion TCGA_RNA-Seq GTF2H3-EIF2B1 GTF2H3 chr12 124118419 + EIF2B1 chr12 124115080 - Exonic hg19 OV TCGA-29-1702-01A 57 1 In-Frame Intra-chr q24.31 q24.31 Seq+ 40911 ChimerSeq STARFusion TCGA_RNA-Seq PPTC7-IGF1 PPTC7 chr12 111020614 - IGF1 chr12 102869577 - Exonic hg19 OV TCGA-29-1702-01A 45 8 Out-of-frame Intra-chr q24.11 q23.2 Tumor suppressor gene Seq+ 40912 ChimerSeq STARFusion TCGA_RNA-Seq STAU2-PAWR STAU2 chr8 74650519 - PAWR chr12 80014987 - Exonic hg19 OV TCGA-29-1702-01A 44 8 In-Frame Inter-chr q21.11 q21.2 Tumor suppressor gene Seq+ 40913 ChimerSeq STARFusion TCGA_RNA-Seq INO80-THSD4 INO80 chr15 41313098 - THSD4 chr15 72020888 + Exonic hg19 OV TCGA-29-1702-01A 29 7 In-Frame Intra-chr q15.1 q23 Seq+ 40914 ChimerSeq STARFusion TCGA_RNA-Seq SH2B3-FBXO21 SH2B3 chr12 111844081 + FBXO21 chr12 117584082 - Exonic hg19 OV TCGA-29-1702-01A 27 1 5'UTR-CDS Intra-chr q24.12 Tumor suppressor gene q24.22 Seq+ 40915 ChimerSeq STARFusion TCGA_RNA-Seq RAP1GAP2-TEKT1 RAP1GAP2 chr17 2703844 + TEKT1 chr17 6719281 - Exonic hg19 OV TCGA-29-1702-01A 26 4 In-Frame Intra-chr p13.3 p13.1 Seq+ 40916 ChimerSeq STARFusion TCGA_RNA-Seq VPS53-RTN4RL1 VPS53 chr17 505035 - RTN4RL1 chr17 1841102 - Exonic hg19 OV TCGA-29-1702-01A 18 3 Out-of-frame Intra-chr Tumor suppressor gene p13.3 Seq+ 40917 ChimerSeq STARFusion TCGA_RNA-Seq CHP1-SMAD3 CHP1 chr15 41556433 + SMAD3 chr15 67482751 + Exonic hg19 OV TCGA-29-1702-01A 16 9 Out-of-frame Intra-chr q15.1 q22.33 Transcription factor Seq+ 40918 ChimerSeq STARFusion TCGA_RNA-Seq MCTP2-CPEB1 MCTP2 chr15 94913409 + CPEB1 chr15 83296118 - Exonic hg19 OV TCGA-29-1702-01A 17 4 Out-of-frame Intra-chr q26.2 q25.2 Transcription factor Seq+ 40919 ChimerSeq STARFusion TCGA_RNA-Seq TTBK2-EMC7 TTBK2 chr15 43212636 - EMC7 chr15 34388215 - Exonic hg19 OV TCGA-29-1702-01A 16 5 Out-of-frame Intra-chr q15.2 CK1:TTBK q14 Seq+ 40920 ChimerSeq STARFusion TCGA_RNA-Seq FUBP1-ZZZ3 FUBP1 chr1 78420940 - ZZZ3 chr1 78050340 - Exonic hg19 OV TCGA-29-1702-01A 13 2 Out-of-frame Intra-chr p31.1 Oncogene p31.1 Transcription factor 40921 ChimerSeq STARFusion TCGA_RNA-Seq TTBK2-EMC7 TTBK2 chr15 43211957 - EMC7 chr15 34388215 - Exonic hg19 OV TCGA-29-1702-01A 12 5 Out-of-frame Intra-chr q15.2 CK1:TTBK q14 Seq+ 40922 ChimerSeq STARFusion TCGA_RNA-Seq STAU2-PAWR STAU2 chr8 74621267 - PAWR chr12 80014987 - Exonic hg19 OV TCGA-29-1702-01A 11 8 In-Frame Inter-chr q21.11 q21.2 Tumor suppressor gene Seq+ 40923 ChimerSeq STARFusion TCGA_RNA-Seq XPR1-LRRC48 XPR1 chr1 180601406 + LRRC48 chr17 17919378 + Exonic hg19 OV TCGA-24-2297-01A 551 21 In-Frame Inter-chr q25.3 Seq+ 40924 ChimerSeq STARFusion TCGA_RNA-Seq SORL1-TBCEL SORL1 chr11 121393698 + TBCEL chr11 120957487 + Exonic hg19 OV TCGA-24-2297-01A 61 2 Out-of-frame Intra-chr q24.1 q23.3 Seq+ 40925 ChimerSeq STARFusion TCGA_RNA-Seq GORASP2-MYO3B GORASP2 chr2 171785913 + MYO3B chr2 171508138 + Exonic hg19 OV TCGA-24-2297-01A 55 1 Out-of-frame Intra-chr q31.1 q31.1 STE:STE20 Seq+ 40926 ChimerSeq STARFusion TCGA_RNA-Seq ERBB4-RBM33 ERBB4 chr2 213403173 - RBM33 chr7 155567253 + Exonic hg19 OV TCGA-24-2297-01A 36 4 Out-of-frame Inter-chr q34 Oncogene Tumor suppressor gene q36.3 Seq+ 40927 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R9A-FBXO16 PPP1R9A chr7 94540820 + FBXO16 chr8 28309993 - Exonic hg19 OV TCGA-24-2297-01A 31 2 In-Frame Inter-chr q21.3 p21.1 Seq+ 40928 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN14-ADARB2 TSPAN14 chr10 82249070 + ADARB2 chr10 1421355 - Exonic hg19 OV TCGA-24-2297-01A 30 1 Out-of-frame Intra-chr q23.1 p15.3 Seq+ 40929 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-SLC45A4 PTK2 chr8 141874411 - SLC45A4 chr8 142264728 - Exonic hg19 OV TCGA-24-2297-01A 28 2 CDS-5'UTR Intra-chr q24.3 q24.3 Seq+ 40930 ChimerSeq STARFusion TCGA_RNA-Seq SKAP1-HOXB3 SKAP1 chr17 46423267 - HOXB3 chr17 46632980 - Exonic hg19 OV TCGA-24-2297-01A 21 1 CDS-5'UTR Intra-chr q21.32 q21.32 Transcription factor Seq+ 40931 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHF2-NDUFAF6 PLEKHF2 chr8 96146258 + NDUFAF6 chr8 96113360 + Exonic hg19 OV TCGA-24-2297-01A 20 1 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 40932 ChimerSeq STARFusion TCGA_RNA-Seq CCAR2-PPP3CC CCAR2 chr8 22470649 + PPP3CC chr8 22368599 + Exonic hg19 OV TCGA-24-2297-01A 18 2 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.3 Tumor suppressor gene Seq+ 40933 ChimerSeq STARFusion TCGA_RNA-Seq NUMA1-PDE2A NUMA1 chr11 71780888 - PDE2A chr11 72353370 - Exonic hg19 OV TCGA-24-2297-01A 17 1 5'UTR-CDS Intra-chr q13.4 Oncogene q13.4 Seq+ 40934 ChimerSeq STARFusion TCGA_RNA-Seq GRIN2A-OR7E36P GRIN2A chr16 10273855 - OR7E36P chr13 42006294 - Exonic hg19 OV TCGA-24-2297-01A 14 0 Out-of-frame Inter-chr p13.2 Tumor suppressor gene q14.11 40935 ChimerSeq STARFusion TCGA_RNA-Seq ERBB4-DIRC3 ERBB4 chr2 213403173 - DIRC3 chr2 218192875 - Exonic hg19 OV TCGA-13-0891-01A 14 5 CDS-3'UTR Intra-chr q34 Oncogene Tumor suppressor gene q35 Seq+ 40936 ChimerSeq STARFusion TCGA_RNA-Seq VGLL4-MKRN2 VGLL4 chr3 11744445 - MKRN2 chr3 12623307 + Exonic hg19 OV TCGA-13-0891-01A 13 0 Out-of-frame Intra-chr p25.2 p25.2 Seq+ 40937 ChimerSeq STARFusion TCGA_RNA-Seq RASA2-IL20RB RASA2 chr3 141305594 + IL20RB chr3 136699308 + Exonic hg19 OV TCGA-13-0891-01A 11 7 In-Frame Intra-chr q23 q22.3 40938 ChimerSeq STARFusion TCGA_RNA-Seq PAPOLA-PPP4R4 PAPOLA chr14 97022750 + PPP4R4 chr14 94744956 + Exonic hg19 OV TCGA-13-0891-01A 9 1 Out-of-frame Intra-chr q32.2 q32.12 40939 ChimerSeq STARFusion TCGA_RNA-Seq JMJD1C-CTNNA3 JMJD1C chr10 65024411 - CTNNA3 chr10 68979628 - Exonic hg19 OV TCGA-13-0891-01A 8 0 In-Frame Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 40940 ChimerSeq STARFusion TCGA_RNA-Seq STX16-VAPB STX16 chr20 57227143 + VAPB chr20 57019133 + Exonic hg19 OV TCGA-13-0891-01A 6 0 In-Frame Intra-chr q13.32 q13.32 40941 ChimerSeq STARFusion TCGA_RNA-Seq RASA2-IL20RB RASA2 chr3 141305597 + IL20RB chr3 136699308 + Exonic hg19 OV TCGA-13-0891-01A 2 7 Out-of-frame Intra-chr q23 q22.3 40942 ChimerSeq STARFusion TCGA_RNA-Seq UBE2K-LIAS UBE2K chr4 39700010 + LIAS chr4 39465145 + Exonic hg19 OV TCGA-13-0891-01A 2 4 In-Frame Intra-chr p14 p14 Seq+ 40943 ChimerSeq STARFusion TCGA_RNA-Seq GSK3B-COX17 GSK3B chr3 119720893 - COX17 chr3 119394080 - Exonic hg19 OV TCGA-04-1655-01A 10 3 Out-of-frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q13.33 Seq+ 40944 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821633 - Exonic hg19 OV TCGA-04-1655-01A 10 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40945 ChimerSeq STARFusion TCGA_RNA-Seq RPS26-ZRSR1 RPS26 chr12 56438001 + ZRSR1 chr5 112228788 + Exonic hg19 OV TCGA-04-1655-01A 8 0 Out-of-frame Inter-chr q13.2 q22.2 40946 ChimerSeq STARFusion TCGA_RNA-Seq AP1G1-NT5DC1 AP1G1 chr16 71842666 - NT5DC1 chr6 116542217 + Exonic hg19 OV TCGA-23-1116-01A 14 1 5'UTR-CDS Inter-chr q22.2 q22.1 Seq+ 40947 ChimerSeq STARFusion TCGA_RNA-Seq EVPL-SRP68 EVPL chr17 74013820 - SRP68 chr17 74046607 - Exonic hg19 OV TCGA-23-1116-01A 14 1 In-Frame Intra-chr q25.1 q25.1 Seq+ 40948 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069803 - Exonic hg19 OV TCGA-23-1116-01A 10 0 Out-of-frame Inter-chr q12.3 q32.2 40949 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-23-1116-01A 6 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40950 ChimerSeq STARFusion TCGA_RNA-Seq RPL13P12-PNMA2 RPL13P12 chr17 17286669 - PNMA2 chr8 26364477 - Exonic hg19 OV TCGA-23-1116-01A 6 0 Out-of-frame Inter-chr p21.2 40951 ChimerSeq STARFusion TCGA_RNA-Seq SPPL3-IL31 SPPL3 chr12 121248612 - IL31 chr12 122657288 - Exonic hg19 OV TCGA-23-1116-01A 5 3 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 40952 ChimerSeq STARFusion TCGA_RNA-Seq PPTC7-GPN3 PPTC7 chr12 111020614 - GPN3 chr12 110903019 - Exonic hg19 OV TCGA-23-1116-01A 4 2 Out-of-frame Intra-chr q24.11 q24.11 Seq+ 40953 ChimerSeq STARFusion TCGA_RNA-Seq C5orf54-SLU7 C5orf54 chr5 159826646 - SLU7 chr5 159830471 - Exonic hg19 OV TCGA-09-2053-01C 30 1 5'UTR-CDS Intra-chr q33.3 40954 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-29-1688-01A 35 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40955 ChimerSeq STARFusion TCGA_RNA-Seq TPSAB1-PRSS27 TPSAB1 chr16 1291991 + PRSS27 chr16 2762815 - Exonic hg19 OV TCGA-29-1688-01A 15 0 In-Frame Intra-chr p13.3 p13.3 40956 ChimerSeq STARFusion TCGA_RNA-Seq EIF3L-CDC42EP1 EIF3L chr22 38274178 + CDC42EP1 chr22 37962079 + Exonic hg19 OV TCGA-29-1688-01A 13 2 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 40957 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-29-1688-01A 12 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40958 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-13-1507-01A 61 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40959 ChimerSeq STARFusion TCGA_RNA-Seq USP54-PCDH15 USP54 chr10 75331179 - PCDH15 chr10 56926411 - Exonic hg19 OV TCGA-13-1507-01A 37 12 CDS-5'UTR Intra-chr q22.2 q21.1 Seq+ 40960 ChimerSeq STARFusion TCGA_RNA-Seq RAD21-EIF3H RAD21 chr8 117878825 - EIF3H chr8 117738411 - Exonic hg19 OV TCGA-13-1507-01A 31 14 In-Frame Intra-chr q24.11 q24.11 Seq+ 40961 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-13-1507-01A 21 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40962 ChimerSeq STARFusion TCGA_RNA-Seq RAD21-EIF3H RAD21 chr8 117874080 - EIF3H chr8 117738411 - Exonic hg19 OV TCGA-13-1507-01A 8 14 Out-of-frame Intra-chr q24.11 q24.11 Seq+ 40963 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-13-1507-01A 11 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40964 ChimerSeq STARFusion TCGA_RNA-Seq RNF144A-HDLBP RNF144A chr2 7057753 + HDLBP chr2 242207956 - Exonic hg19 OV TCGA-13-1507-01A 7 2 5'UTR-5'UTR Intra-chr p25.1 Tumor suppressor gene q37.3 Seq+ 40965 ChimerSeq STARFusion TCGA_RNA-Seq RAD21-EIF3H RAD21 chr8 117875369 - EIF3H chr8 117671219 - Exonic hg19 OV TCGA-13-1507-01A 4 12 In-Frame Intra-chr q24.11 q24.11 Seq+ 40966 ChimerSeq STARFusion TCGA_RNA-Seq RPS17-SPP1 RPS17 chr15 82823336 - SPP1 chr4 88896865 + Exonic hg19 OV TCGA-13-1507-01A 6 3 Out-of-frame Inter-chr q25.2 q22.1 40967 ChimerSeq STARFusion TCGA_RNA-Seq BMP7-DYNC2LI1 BMP7 chr20 55777531 - DYNC2LI1 chr2 44031781 + Exonic hg19 OV TCGA-29-2414-02A 45 1 In-Frame Inter-chr q13.31 p21 Seq+ 40968 ChimerSeq STARFusion TCGA_RNA-Seq SCAF8-TIAM2 SCAF8 chr6 155055064 + TIAM2 chr6 155265250 + Exonic hg19 OV TCGA-29-2414-02A 24 2 CDS-5'UTR Intra-chr q25.2 q25.2 40969 ChimerSeq STARFusion TCGA_RNA-Seq C19orf48-KLK7 C19orf48 chr19 51305474 - KLK7 chr19 51485170 - Exonic hg19 OV TCGA-23-2078-01A 396 7 5'UTR-5'UTR Intra-chr q13.33 q13.41 Seq+ 40970 ChimerSeq STARFusion TCGA_RNA-Seq MUC16-OR7G2 MUC16 chr19 9024134 - OR7G2 chr19 9213935 - Exonic hg19 OV TCGA-23-2078-01A 206 30 Out-of-frame Intra-chr p13.2 p13.2 40971 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SORBS2 IGH@ chr14 106610312 - SORBS2 chr4 186560127 - Exonic hg19 OV TCGA-23-2078-01A 62 0 Out-of-frame Inter-chr 32.33 q35.1 40972 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-FGR WASF2 chr1 27816497 - FGR chr1 27951662 - Exonic hg19 OV TCGA-23-2078-01A 55 7 5'UTR-5'UTR Intra-chr p36.11 p35.3 TK:Src Seq+ 40973 ChimerSeq STARFusion TCGA_RNA-Seq PDE4D-DEPDC1B PDE4D chr5 59783769 - DEPDC1B chr5 59901683 - Exonic hg19 OV TCGA-23-2078-01A 29 5 5'UTR-CDS Intra-chr q12.1 q12.1 Seq+ 40974 ChimerSeq STARFusion TCGA_RNA-Seq TTC3-IL10RB TTC3 chr21 38445773 + IL10RB chr21 34655399 + Exonic hg19 OV TCGA-23-2078-01A 20 8 5'UTR-CDS Intra-chr q22.13 q22.11 Seq+ 40975 ChimerSeq STARFusion TCGA_RNA-Seq LAPTM4B-CPQ LAPTM4B chr8 98788336 + CPQ chr8 98155248 + Exonic hg19 OV TCGA-23-2078-01A 20 4 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 40976 ChimerSeq STARFusion TCGA_RNA-Seq TTC3-IL10RB TTC3 chr21 38445664 + IL10RB chr21 34655399 + Exonic hg19 OV TCGA-23-2078-01A 18 8 5'UTR-CDS Intra-chr q22.13 q22.11 Seq+ 40977 ChimerSeq STARFusion TCGA_RNA-Seq RIMS3-SCMH1 RIMS3 chr1 41131066 - SCMH1 chr1 41541123 - Exonic hg19 OV TCGA-23-2078-01A 13 1 5'UTR-CDS Intra-chr p34.2 p34.2 Transcription factor Seq+ 40978 ChimerSeq STARFusion TCGA_RNA-Seq LYAR-CTBP1 LYAR chr4 4285348 - CTBP1 chr4 1222131 - Exonic hg19 OV TCGA-25-2391-01A 65 2 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 40979 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-31-1944-01A 36 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 40980 ChimerSeq STARFusion TCGA_RNA-Seq UBR5-CADM2 UBR5 chr8 103424401 - CADM2 chr3 85932441 + Exonic hg19 OV TCGA-31-1944-01A 23 3 Out-of-frame Inter-chr q22.3 Oncogene p12.1 Tumor suppressor gene Seq+ 40981 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-31-1944-01A 23 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40982 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-31-1944-01A 21 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40983 ChimerSeq STARFusion TCGA_RNA-Seq DDR1-PAK1 DDR1 chr6 30861200 + PAK1 chr11 77070062 - Exonic hg19 OV TCGA-13-1477-01A 114 34 In-Frame Inter-chr TK:DDR q14.1 STE:STE20 Seq+ 40984 ChimerSeq STARFusion TCGA_RNA-Seq NMNAT3-RBP1 NMNAT3 chr3 139346458 - RBP1 chr3 139237364 - Exonic hg19 OV TCGA-24-2261-01A 53 9 Out-of-frame Intra-chr q23 q23 Tumor suppressor gene Seq+ 40985 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D9-PAPSS1 TBC1D9 chr4 141677070 - PAPSS1 chr4 108535543 - Exonic hg19 OV TCGA-24-2261-01A 30 2 Out-of-frame Intra-chr q31.21 q25 Seq+ 40986 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821632 - Exonic hg19 OV TCGA-24-2261-01A 19 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 40987 ChimerSeq STARFusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2017364 - COL1A1 chr17 48264072 - Exonic hg19 OV TCGA-24-2261-01A 5 20 Out-of-frame Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 40988 ChimerSeq STARFusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2017357 - COL1A1 chr17 48264067 - Exonic hg19 OV TCGA-24-2261-01A 4 19 Out-of-frame Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 40989 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC7-GHDC DNAJC7 chr17 40169358 - GHDC chr17 40345868 - Exonic hg19 OV TCGA-61-1910-01A 53 2 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 40990 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0319L-PSMB2 KIAA0319L chr1 36019951 - PSMB2 chr1 36102033 - Exonic hg19 OV TCGA-61-1910-01A 43 0 In-Frame Intra-chr p34.3 p34.3 Seq+ 40991 ChimerSeq STARFusion TCGA_RNA-Seq CTDSPL2-CASC4 CTDSPL2 chr15 44751398 + CASC4 chr15 44705534 + Exonic hg19 OV TCGA-61-1910-01A 26 3 Out-of-frame Intra-chr q15.3 q15.3 Seq+ 40992 ChimerSeq STARFusion TCGA_RNA-Seq KCNC3-NAPSA KCNC3 chr19 50831470 - NAPSA chr19 50865570 - Exonic hg19 OV TCGA-61-1910-01A 25 2 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 40993 ChimerSeq STARFusion TCGA_RNA-Seq NF1-ADAP2 NF1 chr17 29422387 + ADAP2 chr17 29281496 + Exonic hg19 OV TCGA-61-1910-01A 18 0 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 40994 ChimerSeq STARFusion TCGA_RNA-Seq ATAT1-HCG20 ATAT1 chr6 30596207 + HCG20 chr6 30756468 + Exonic hg19 OV TCGA-61-1910-01A 12 0 Out-of-frame Intra-chr Seq+ 40995 ChimerSeq STARFusion TCGA_RNA-Seq CDK13-LINC00265 CDK13 chr7 39991451 + LINC00265 chr7 39807003 + Exonic hg19 OV TCGA-61-1910-01A 11 0 CDS-5'UTR Intra-chr p14.1 p14.1 40996 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC7-GHDC DNAJC7 chr17 40169358 - GHDC chr17 40345612 - Exonic hg19 OV TCGA-61-1910-01A 8 2 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 40997 ChimerSeq STARFusion TCGA_RNA-Seq CIITA-FCHSD2 CIITA chr16 10996658 + FCHSD2 chr11 72632995 - Exonic hg19 OV TCGA-61-1910-01A 8 1 Out-of-frame Inter-chr p13.13 q13.4 Seq+ 40998 ChimerSeq STARFusion TCGA_RNA-Seq MROH1-PPM1E MROH1 chr8 145223343 + PPM1E chr17 57033010 + Exonic hg19 OV TCGA-61-1910-01A 7 0 Out-of-frame Inter-chr q24.3 q22 Seq+ 40999 ChimerSeq STARFusion TCGA_RNA-Seq POTEE-SMPD4 POTEE chr2 131981616 + SMPD4 chr2 130925163 - Exonic hg19 OV TCGA-61-1910-01A 5 1 Out-of-frame Intra-chr q21.1 q21.1 41000 ChimerSeq STARFusion TCGA_RNA-Seq ENDOV-RNF213 ENDOV chr17 78403631 + RNF213 chr17 78362412 + Exonic hg19 OV TCGA-61-1910-01A 5 0 Out-of-frame Intra-chr q25.3 q25.3 Oncogene Seq+ 41001 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-61-1910-01A 5 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41002 ChimerSeq STARFusion TCGA_RNA-Seq RASA4-ATXN7L1 RASA4 chr7 102232732 - ATXN7L1 chr7 105251050 - Exonic hg19 OV TCGA-61-1910-01A 5 0 In-Frame Intra-chr q22.1 q22.3 41003 ChimerSeq STARFusion TCGA_RNA-Seq DHRS13-PHF12 DHRS13 chr17 27229601 - PHF12 chr17 27241055 - Exonic hg19 OV TCGA-61-1910-01A 4 2 In-Frame Intra-chr q11.2 q11.2 Seq+ 41004 ChimerSeq STARFusion TCGA_RNA-Seq XPR1-AHNAK XPR1 chr1 180601406 + AHNAK chr11 62259303 - Exonic hg19 OV TCGA-61-1740-01A 523 103 In-Frame Inter-chr q25.3 q12.3 Tumor suppressor gene Seq+ 41005 ChimerSeq STARFusion TCGA_RNA-Seq ALG9-CRYAB ALG9 chr11 111749685 - CRYAB chr11 111782646 - Exonic hg19 OV TCGA-61-1740-01A 90 33 Out-of-frame Intra-chr q23.1 q23.1 41006 ChimerSeq STARFusion TCGA_RNA-Seq ALG9-CRYAB ALG9 chr11 111749280 - CRYAB chr11 111782646 - Exonic hg19 OV TCGA-61-1740-01A 51 33 Out-of-frame Intra-chr q23.1 q23.1 41007 ChimerSeq STARFusion TCGA_RNA-Seq YME1L1-ZNF438 YME1L1 chr10 27437835 - ZNF438 chr10 31197944 - Exonic hg19 OV TCGA-61-1740-01A 33 16 CDS-5'UTR Intra-chr p12.1 p11.23 Transcription factor Seq+ 41008 ChimerSeq STARFusion TCGA_RNA-Seq SFXN5-M1AP SFXN5 chr2 73226078 - M1AP chr2 74789550 - Exonic hg19 OV TCGA-61-1740-01A 27 7 Out-of-frame Intra-chr p13.2 p13.1 Seq+ 41009 ChimerSeq STARFusion TCGA_RNA-Seq PRKD2-HPSE2 PRKD2 chr19 47181653 - HPSE2 chr10 100249953 - Exonic hg19 OV TCGA-61-1740-01A 24 4 Out-of-frame Inter-chr q13.32 q24.2 Seq+ 41010 ChimerSeq STARFusion TCGA_RNA-Seq EML2-FBXO46 EML2 chr19 46120888 - FBXO46 chr19 46216831 - Exonic hg19 OV TCGA-61-1740-01A 18 6 CDS-5'UTR Intra-chr q13.32 q13.32 Seq+ 41011 ChimerSeq STARFusion TCGA_RNA-Seq EP300-CARD8 EP300 chr22 41489102 + CARD8 chr19 48718641 - Exonic hg19 OV TCGA-61-1740-01A 11 5 In-Frame Inter-chr q13.2 Oncogene q13.33 Seq+ 41012 ChimerSeq STARFusion TCGA_RNA-Seq MPP5-SRGAP2 MPP5 chr14 67708250 + SRGAP2 chr1 206623731 + Exonic hg19 OV TCGA-61-1740-01A 10 7 5'UTR-CDS Inter-chr q23.3 q32.1 Tumor suppressor gene Seq+ 41013 ChimerSeq STARFusion TCGA_RNA-Seq SFXN5-M1AP SFXN5 chr2 73226078 - M1AP chr2 74787418 - Exonic hg19 OV TCGA-61-1740-01A 10 7 Out-of-frame Intra-chr p13.2 p13.1 Seq+ 41014 ChimerSeq STARFusion TCGA_RNA-Seq MPP5-SRGAP2 MPP5 chr14 67721027 + SRGAP2 chr1 206623731 + Exonic hg19 OV TCGA-61-1740-01A 8 7 5'UTR-CDS Inter-chr q23.3 q32.1 Tumor suppressor gene Seq+ 41015 ChimerSeq STARFusion TCGA_RNA-Seq PCBP2-PFDN5 PCBP2 chr12 53856351 + PFDN5 chr12 53691634 + Exonic hg19 OV TCGA-25-1631-01A 206 40 In-Frame Intra-chr q13.13 q13.13 Seq+ 41016 ChimerSeq STARFusion TCGA_RNA-Seq SNRPA-GRIK5 SNRPA chr19 41256882 + GRIK5 chr19 42569972 - Exonic hg19 OV TCGA-25-1631-01A 37 16 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 41017 ChimerSeq STARFusion TCGA_RNA-Seq SNRPA-GRIK5 SNRPA chr19 41256842 + GRIK5 chr19 42569972 - Exonic hg19 OV TCGA-25-1631-01A 15 16 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 41018 ChimerSeq STARFusion TCGA_RNA-Seq ATXN10-PRPF19 ATXN10 chr22 46136418 + PRPF19 chr11 60669012 - Exonic hg19 OV TCGA-25-1631-01A 14 1 In-Frame Inter-chr q13.31 q12.2 Seq+ 41019 ChimerSeq STARFusion TCGA_RNA-Seq CC2D1A-ZSWIM4 CC2D1A chr19 14041398 + ZSWIM4 chr19 13934160 + Exonic hg19 OV TCGA-25-1631-01A 11 5 3'UTR-CDS Intra-chr p13.12 Transcription factor p13.13 Seq+ 41020 ChimerSeq STARFusion TCGA_RNA-Seq FLOT2-PHF12 FLOT2 chr17 27224544 - PHF12 chr17 27235899 - Exonic hg19 OV TCGA-25-1631-01A 11 2 In-Frame Intra-chr q11.2 q11.2 Seq+ 41021 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-RHOD KDM2A chr11 66888829 + RHOD chr11 66833367 + Exonic hg19 OV TCGA-25-1631-01A 9 2 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 41022 ChimerSeq STARFusion TCGA_RNA-Seq DDT-C21orf33 DDT chr22 24315957 - C21orf33 chr21 45555942 + Exonic hg19 OV TCGA-13-0797-01A 227 104 In-Frame Inter-chr q22.3 41023 ChimerSeq STARFusion TCGA_RNA-Seq DDTL-C21orf33 DDTL chr22 24309749 + C21orf33 chr21 45555942 + Exonic hg19 OV TCGA-13-0797-01A 223 104 In-Frame Inter-chr q22.3 Seq+ 41024 ChimerSeq STARFusion TCGA_RNA-Seq DDTL-C21orf33 DDTL chr22 24373785 + C21orf33 chr21 45555942 + Exonic hg19 OV TCGA-13-0797-01A 72 91 3'UTR-CDS Inter-chr q22.3 Seq+ 41025 ChimerSeq STARFusion TCGA_RNA-Seq SWI5-RINT1 SWI5 chr9 131048312 + RINT1 chr7 105207566 + Exonic hg19 OV TCGA-13-0797-01A 59 18 Out-of-frame Inter-chr q34.11 q22.3 Tumor suppressor gene Seq+ 41026 ChimerSeq STARFusion TCGA_RNA-Seq KLF3-FAM114A1 KLF3 chr4 38682303 + FAM114A1 chr4 38924391 + Exonic hg19 OV TCGA-13-0797-01A 46 8 In-Frame Intra-chr p14 Transcription factor p14 Seq+ 41027 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-13-0797-01A 36 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41028 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-13-0797-01A 18 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 41029 ChimerSeq STARFusion TCGA_RNA-Seq DEDD2-LIPE DEDD2 chr19 42713851 - LIPE chr19 42912268 - Exonic hg19 OV TCGA-13-0797-01A 11 5 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 41030 ChimerSeq STARFusion TCGA_RNA-Seq CGRRF1-CDKN3 CGRRF1 chr14 54976781 + CDKN3 chr14 54866612 + Exonic hg19 OV TCGA-13-0797-01A 11 0 Out-of-frame Intra-chr q22.2 q22.2 41031 ChimerSeq STARFusion TCGA_RNA-Seq DEDD2-LIPE DEDD2 chr19 42713852 - LIPE chr19 42912245 - Exonic hg19 OV TCGA-13-0797-01A 7 5 In-Frame Intra-chr q13.2 q13.2 Seq+ 41032 ChimerSeq STARFusion TCGA_RNA-Seq XIAP-AMELX XIAP chrX 122994143 + AMELX chrX 11311468 + Exonic hg19 OV TCGA-04-1364-01A 164 145 5'UTR-5'UTR Intra-chr q25 p22.2 41033 ChimerSeq STARFusion TCGA_RNA-Seq XIAP-AMELX XIAP chrX 122993755 + AMELX chrX 11311468 + Exonic hg19 OV TCGA-04-1364-01A 80 145 5'UTR-5'UTR Intra-chr q25 p22.2 41034 ChimerSeq STARFusion TCGA_RNA-Seq XIAP-AMELX XIAP chrX 122994395 + AMELX chrX 11311468 + Exonic hg19 OV TCGA-04-1364-01A 19 145 Out-of-frame Intra-chr q25 p22.2 41035 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPC-RIOK2 HNRNPC chr14 21730760 - RIOK2 chr5 96513552 - Exonic hg19 OV TCGA-04-1364-01A 20 0 5'UTR-CDS Inter-chr q11.2 q15 Atypical:RIO Seq+ 41036 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A42-GATAD2A SLC25A42 chr19 19217194 + GATAD2A chr19 19616153 + Exonic hg19 OV TCGA-04-1364-01A 16 3 Out-of-frame Intra-chr p13.11 p13.11 Transcription factor Seq+ 41037 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPC-RIOK2 HNRNPC chr14 21731470 - RIOK2 chr5 96513552 - Exonic hg19 OV TCGA-04-1364-01A 10 0 5'UTR-CDS Inter-chr q11.2 q15 Atypical:RIO Seq+ 41038 ChimerSeq STARFusion TCGA_RNA-Seq KDM4B-ASMTL KDM4B chr19 5152242 + ASMTL chrY 1472478 - Exonic hg19 OV TCGA-04-1364-01A 8 1 Out-of-frame Inter-chr p13.3 p22.33 41039 ChimerSeq STARFusion TCGA_RNA-Seq RASGEF1A-SFTA1P RASGEF1A chr10 43694381 - SFTA1P chr10 10828718 - Exonic hg19 OV TCGA-04-1364-01A 7 3 CDS-3'UTR Intra-chr q11.21 p14 Seq+ 41040 ChimerSeq STARFusion TCGA_RNA-Seq CCT3-MEF2D CCT3 chr1 156303338 - MEF2D chr1 156453222 - Exonic hg19 OV TCGA-04-1364-01A 7 2 CDS-5'UTR Intra-chr q22 q22 Transcription factor 41041 ChimerSeq STARFusion TCGA_RNA-Seq DYNC2H1-CCDC60 DYNC2H1 chr11 103130706 + CCDC60 chr12 119942874 + Exonic hg19 OV TCGA-24-2036-01A 20 4 In-Frame Inter-chr q22.3 q24.23 Seq+ 41042 ChimerSeq STARFusion TCGA_RNA-Seq GAREM-DNAH9 GAREM chr18 29972858 - DNAH9 chr17 11772451 + Exonic hg19 OV TCGA-24-2036-01A 11 0 Out-of-frame Inter-chr p12 41043 ChimerSeq STARFusion TCGA_RNA-Seq SH3GL1-MGAT5B SH3GL1 chr19 4361676 - MGAT5B chr17 74934070 + Exonic hg19 OV TCGA-24-2036-01A 10 3 In-Frame Inter-chr p13.3 q25.2 Seq+ 41044 ChimerSeq STARFusion TCGA_RNA-Seq SH3GL1-MGAT5B SH3GL1 chr19 4361621 - MGAT5B chr17 74934070 + Exonic hg19 OV TCGA-24-2036-01A 9 3 In-Frame Inter-chr p13.3 q25.2 Seq+ 41045 ChimerSeq STARFusion TCGA_RNA-Seq CDR2L-HID1 CDR2L chr17 72984217 + HID1 chr17 72960727 - Exonic hg19 OV TCGA-09-0364-01A 89 35 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 41046 ChimerSeq STARFusion TCGA_RNA-Seq MCF2L-GRK1 MCF2L chr13 113556685 + GRK1 chr13 114435857 + Exonic hg19 OV TCGA-09-0364-01A 6 11 5'UTR-CDS Intra-chr q34 Seq+ 41047 ChimerSeq STARFusion TCGA_RNA-Seq ADCK3-EPHX1 ADCK3 chr1 227128100 + EPHX1 chr1 226032199 + Exonic hg19 OV TCGA-61-1998-01A 148 50 5'UTR-CDS Intra-chr Atypical:ABC1 q42.12 Seq+ 41048 ChimerSeq STARFusion TCGA_RNA-Seq GLE1-ODF2 GLE1 chr9 131267183 + ODF2 chr9 131254705 + Exonic hg19 OV TCGA-61-1998-01A 50 4 In-Frame Intra-chr q34.11 q34.11 Seq+ 41049 ChimerSeq STARFusion TCGA_RNA-Seq C9orf89-TMOD1 C9orf89 chr9 95870109 + TMOD1 chr9 100286423 + Exonic hg19 OV TCGA-61-1998-01A 14 2 CDS-5'UTR Intra-chr q22.33 41050 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A29-WARS SLC25A29 chr14 100757695 - WARS chr14 100828258 - Exonic hg19 OV TCGA-61-1998-01A 13 1 3'UTR-CDS Intra-chr q32.2 q32.2 Seq+ 41051 ChimerSeq STARFusion TCGA_RNA-Seq JKAMP-DAAM1 JKAMP chr14 59953522 + DAAM1 chr14 59806792 + Exonic hg19 OV TCGA-61-1998-01A 10 1 In-Frame Intra-chr q23.1 q23.1 Seq+ 41052 ChimerSeq STARFusion TCGA_RNA-Seq ZNF532-MALT1 ZNF532 chr18 56532811 + MALT1 chr18 56390280 + Exonic hg19 OV TCGA-61-1998-01A 9 0 5'UTR-CDS Intra-chr q21.32 Transcription factor q21.32 Oncogene Seq+ 41053 ChimerSeq STARFusion TCGA_RNA-Seq CALD1-EXOC4 CALD1 chr7 134552555 + EXOC4 chr7 133502078 + Exonic hg19 OV TCGA-61-1998-01A 8 3 In-Frame Intra-chr q33 q33 Seq+ 41054 ChimerSeq STARFusion TCGA_RNA-Seq SLC1A3-FYB SLC1A3 chr5 36608706 + FYB chr5 39110491 - Exonic hg19 OV TCGA-61-1998-01A 8 0 In-Frame Intra-chr p13.2 p13.1 Seq+ 41055 ChimerSeq STARFusion TCGA_RNA-Seq C9orf89-TMOD1 C9orf89 chr9 95858634 + TMOD1 chr9 100286423 + Exonic hg19 OV TCGA-61-1998-01A 7 2 CDS-5'UTR Intra-chr q22.33 41056 ChimerSeq STARFusion TCGA_RNA-Seq FAM174B-C1orf185 FAM174B chr15 93173444 - C1orf185 chr1 51578136 + Exonic hg19 OV TCGA-61-1998-01A 7 2 Out-of-frame Inter-chr q26.1 p32.3 41057 ChimerSeq STARFusion TCGA_RNA-Seq C9orf89-TMOD1 C9orf89 chr9 95870098 + TMOD1 chr9 100286423 + Exonic hg19 OV TCGA-61-1998-01A 6 2 CDS-5'UTR Intra-chr q22.33 41058 ChimerSeq STARFusion TCGA_RNA-Seq RPL10A-FANCE RPL10A chr6 35438128 + FANCE chr6 35430566 + Exonic hg19 OV TCGA-13-0760-01A 294 114 In-Frame Intra-chr p21.31 p21.31 41059 ChimerSeq STARFusion TCGA_RNA-Seq PARVB-SAMM50 PARVB chr22 44420331 + SAMM50 chr22 44392218 + Exonic hg19 OV TCGA-13-0760-01A 104 41 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 41060 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHM1P-LRRC37A3 PLEKHM1P chr17 62817885 - LRRC37A3 chr17 62864654 - Exonic hg19 OV TCGA-13-0760-01A 51 18 3'UTR-CDS Intra-chr q24.1 41061 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069803 - Exonic hg19 OV TCGA-13-0760-01A 51 0 Out-of-frame Inter-chr q12.3 q32.2 41062 ChimerSeq STARFusion TCGA_RNA-Seq LPP-F2 LPP chr3 188059507 + F2 chr11 46741252 + Exonic hg19 OV TCGA-13-0760-01A 36 16 5'UTR-CDS Inter-chr q27.3 Oncogene p11.2 Seq+ 41063 ChimerSeq STARFusion TCGA_RNA-Seq MCCC1-RAD51B MCCC1 chr3 182763201 - RAD51B chr14 68758601 + Exonic hg19 OV TCGA-13-0760-01A 37 9 In-Frame Inter-chr q27.1 q24.1 Seq+ 41064 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61665880 - ANK3 chr10 61827767 - Exonic hg19 OV TCGA-13-0760-01A 29 11 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 41065 ChimerSeq STARFusion TCGA_RNA-Seq PRKAG2-ORC5 PRKAG2 chr7 151329155 - ORC5 chr7 103808973 - Exonic hg19 OV TCGA-13-0760-01A 25 7 Out-of-frame Intra-chr q36.1 q22.2 Seq+ 41066 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469662 + FTH1P27 chrX 37364954 + Exonic hg19 OV TCGA-13-0760-01A 26 0 Out-of-frame Inter-chr q13.33 p21.1 41067 ChimerSeq STARFusion TCGA_RNA-Seq SLC10A7-TTC29 SLC10A7 chr4 147438190 - TTC29 chr4 147628703 - Exonic hg19 OV TCGA-13-0760-01A 23 9 Out-of-frame Intra-chr q31.22 q31.22 Seq+ 41068 ChimerSeq STARFusion TCGA_RNA-Seq MAN1A2-TTF2 MAN1A2 chr1 117963271 + TTF2 chr1 117622190 + Exonic hg19 OV TCGA-13-0760-01A 23 2 In-Frame Intra-chr p12 p13.1 Seq+ 41069 ChimerSeq STARFusion TCGA_RNA-Seq PARVB-SAMM50 PARVB chr22 44435837 + SAMM50 chr22 44392218 + Exonic hg19 OV TCGA-13-0760-01A 13 41 5'UTR-CDS Intra-chr q13.31 q13.31 Seq+ 41070 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61665880 - ANK3 chr10 61874089 - Exonic hg19 OV TCGA-13-0760-01A 19 11 In-Frame Intra-chr q21.2 q21.2 Seq+ 41071 ChimerSeq STARFusion TCGA_RNA-Seq SNX29-DERA SNX29 chr16 12070670 + DERA chr12 16135242 + Exonic hg19 OV TCGA-13-0760-01A 13 14 In-Frame Inter-chr p13.13 p12.3 Seq+ 41072 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890980 - BCAR4 chr16 11914154 - Exonic hg19 OV TCGA-13-0760-01A 11 10 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 41073 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61665880 - ANK3 chr10 61802517 - Exonic hg19 OV TCGA-13-0760-01A 10 11 In-Frame Intra-chr q21.2 q21.2 Seq+ 41074 ChimerSeq STARFusion TCGA_RNA-Seq LPP-F2 LPP chr3 187943315 + F2 chr11 46741252 + Exonic hg19 OV TCGA-13-0760-01A 5 16 5'UTR-CDS Inter-chr q27.3 Oncogene p11.2 Seq+ 41075 ChimerSeq STARFusion TCGA_RNA-Seq MAPK9-UBL7 MAPK9 chr5 179718848 - UBL7 chr15 74749012 - Exonic hg19 OV TCGA-25-1314-01A 125 28 5'UTR-CDS Inter-chr q35.3 Tumor suppressor gene q24.1 Seq+ 41076 ChimerSeq STARFusion TCGA_RNA-Seq STRBP-SLC35D2 STRBP chr9 126030715 - SLC35D2 chr9 99130587 - Exonic hg19 OV TCGA-25-1314-01A 22 3 5'UTR-CDS Intra-chr q33.3 q22.32 Seq+ 41077 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-25-1314-01A 20 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41078 ChimerSeq STARFusion TCGA_RNA-Seq UBL7-MAPK9 UBL7 chr15 74751025 - MAPK9 chr5 179707608 - Exonic hg19 OV TCGA-25-1314-01A 15 4 CDS-5'UTR Inter-chr q24.1 q35.3 Tumor suppressor gene Seq+ 41079 ChimerSeq STARFusion TCGA_RNA-Seq SCAP-SLC25A20 SCAP chr3 47517289 - SLC25A20 chr3 48929505 - Exonic hg19 OV TCGA-24-1467-01A 33 6 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 41080 ChimerSeq STARFusion TCGA_RNA-Seq HIBADH-JAZF1 HIBADH chr7 27668990 - JAZF1 chr7 28031600 - Exonic hg19 OV TCGA-24-1467-01A 20 8 In-Frame Intra-chr p15.2 p15.1 Transcription factor 41081 ChimerSeq STARFusion TCGA_RNA-Seq SKAP1-ZNF74 SKAP1 chr17 46474042 - ZNF74 chr22 20754922 + Exonic hg19 OV TCGA-24-1467-01A 18 6 Out-of-frame Inter-chr q21.32 q11.21 Transcription factor Seq+ 41082 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-24-1467-01A 13 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41083 ChimerSeq STARFusion TCGA_RNA-Seq CCDC57-RAB40B CCDC57 chr17 80146095 - RAB40B chr17 80622432 - Exonic hg19 OV TCGA-24-1467-01A 12 3 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 41084 ChimerSeq STARFusion TCGA_RNA-Seq CCDC9-SAE1 CCDC9 chr19 47759866 + SAE1 chr19 47673075 + Exonic hg19 OV TCGA-24-1467-01A 12 3 5'UTR-5'UTR Intra-chr q13.32 q13.32 Seq+ 41085 ChimerSeq STARFusion TCGA_RNA-Seq TAF2-DEPTOR TAF2 chr8 120843917 - DEPTOR chr8 120940640 + Exonic hg19 OV TCGA-24-1467-01A 6 7 Out-of-frame Intra-chr q24.12 q24.12 Seq+ 41086 ChimerSeq STARFusion TCGA_RNA-Seq TAF2-DEPTOR TAF2 chr8 120831586 - DEPTOR chr8 120940640 + Exonic hg19 OV TCGA-24-1467-01A 6 7 In-Frame Intra-chr q24.12 q24.12 Seq+ 41087 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-CCDC85B MAP4 chr3 48040128 - CCDC85B chr11 65658328 + Exonic hg19 OV TCGA-24-1467-01A 4 4 In-Frame Inter-chr p21.31 q13.1 Seq+ 41088 ChimerSeq STARFusion TCGA_RNA-Seq MTDH-LAPTM4B MTDH chr8 98673401 + LAPTM4B chr8 98817581 + Exonic hg19 OV TCGA-61-2088-01A 40 2 In-Frame Intra-chr q22.1 q22.1 41089 ChimerSeq STARFusion TCGA_RNA-Seq BTBD9-SUPT3H BTBD9 chr6 38545376 - SUPT3H chr6 44797594 - Exonic hg19 OV TCGA-61-2088-01A 29 2 Out-of-frame Intra-chr p21.2 p21.1 Seq+ 41090 ChimerSeq STARFusion TCGA_RNA-Seq NUDT3-MOCS1 NUDT3 chr6 34309639 - MOCS1 chr6 39883976 - Exonic hg19 OV TCGA-61-2088-01A 25 3 Out-of-frame Intra-chr p21.31 p21.2 Seq+ 41091 ChimerSeq STARFusion TCGA_RNA-Seq SLX4IP-DEFB126 SLX4IP chr20 10438879 + DEFB126 chr20 126056 + Exonic hg19 OV TCGA-61-2088-01A 21 5 Out-of-frame Intra-chr p12.2 p13 Seq+ 41092 ChimerSeq STARFusion TCGA_RNA-Seq SLX4IP-DEFB126 SLX4IP chr20 10438879 + DEFB126 chr20 126220 + Exonic hg19 OV TCGA-61-2088-01A 18 3 Out-of-frame Intra-chr p12.2 p13 Seq+ 41093 ChimerSeq STARFusion TCGA_RNA-Seq DNASE2-GADD45GIP1 DNASE2 chr19 12989196 - GADD45GIP1 chr19 13065340 - Exonic hg19 OV TCGA-61-2088-01A 12 0 Out-of-frame Intra-chr p13.13 p13.13 Tumor suppressor gene Seq+ 41094 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-SLC43A2 YWHAE chr17 1257505 - SLC43A2 chr17 1496573 - Exonic hg19 OV TCGA-29-1774-01A 14 6 Out-of-frame Intra-chr p13.3 Seq+ 41095 ChimerSeq STARFusion TCGA_RNA-Seq FASN-CCDC57 FASN chr17 80055997 - CCDC57 chr17 80059742 - Exonic hg19 OV TCGA-13-1512-01A 1334 596 5'UTR-CDS Intra-chr q25.3 q25.3 Seq+ 41096 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-PTK2 AGO2 chr8 141645584 - PTK2 chr8 141685598 - Exonic hg19 OV TCGA-13-1512-01A 87 44 Out-of-frame Intra-chr q24.3 q24.3 41097 ChimerSeq STARFusion TCGA_RNA-Seq ACAP3-CPSF3L ACAP3 chr1 1243149 - CPSF3L chr1 1250342 - Exonic hg19 OV TCGA-13-1512-01A 77 9 In-Frame Intra-chr p36.33 Seq+ 41098 ChimerSeq STARFusion TCGA_RNA-Seq DDX46-CAMLG DDX46 chr5 134102750 + CAMLG chr5 134079677 + Exonic hg19 OV TCGA-13-1512-01A 59 16 Out-of-frame Intra-chr q31.1 q31.1 41099 ChimerSeq STARFusion TCGA_RNA-Seq L1CAM-ARHGAP4 L1CAM chrX 153130578 - ARHGAP4 chrX 153185153 - Exonic hg19 OV TCGA-13-1512-01A 62 2 Out-of-frame Intra-chr q28 q28 41100 ChimerSeq STARFusion TCGA_RNA-Seq ARID4B-GNPAT ARID4B chr1 235490229 - GNPAT chr1 231398469 + Exonic hg19 OV TCGA-13-1512-01A 50 8 In-Frame Intra-chr q42.3 q42.2 Seq+ 41101 ChimerSeq STARFusion TCGA_RNA-Seq ACAP3-CPSF3L ACAP3 chr1 1243149 - CPSF3L chr1 1250818 - Exonic hg19 OV TCGA-13-1512-01A 39 9 Out-of-frame Intra-chr p36.33 Seq+ 41102 ChimerSeq STARFusion TCGA_RNA-Seq MAN1A2-CD101 MAN1A2 chr1 118045592 + CD101 chr1 117576482 + Exonic hg19 OV TCGA-13-1512-01A 23 10 Out-of-frame Intra-chr p12 p13.1 Seq+ 41103 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-PTK2 AGO2 chr8 141645584 - PTK2 chr8 141684503 - Exonic hg19 OV TCGA-13-1512-01A 12 44 Out-of-frame Intra-chr q24.3 q24.3 41104 ChimerSeq STARFusion TCGA_RNA-Seq STK3-PAQR3 STK3 chr8 99538970 - PAQR3 chr4 79827315 - Exonic hg19 OV TCGA-13-1512-01A 21 2 CDS-3'UTR Inter-chr q22.2 q21.21 Seq+ 41105 ChimerSeq STARFusion TCGA_RNA-Seq DDX46-CAMLG DDX46 chr5 134102750 + CAMLG chr5 134086449 + Exonic hg19 OV TCGA-13-1512-01A 13 16 Out-of-frame Intra-chr q31.1 q31.1 41106 ChimerSeq STARFusion TCGA_RNA-Seq ARID4B-GNPAT ARID4B chr1 235490229 - GNPAT chr1 231401039 + Exonic hg19 OV TCGA-13-1512-01A 14 8 Out-of-frame Intra-chr q42.3 q42.2 Seq+ 41107 ChimerSeq STARFusion TCGA_RNA-Seq PEA15-KCNJ9 PEA15 chr1 160178876 + KCNJ9 chr1 160053997 + Exonic hg19 OV TCGA-13-1512-01A 6 3 Out-of-frame Intra-chr q23.2 Tumor suppressor gene q23.2 41108 ChimerSeq STARFusion TCGA_RNA-Seq CACNA2D3-SRP68 CACNA2D3 chr3 54157621 + SRP68 chr17 74063411 - Exonic hg19 OV TCGA-13-1512-01A 5 6 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q25.1 Seq+ 41109 ChimerSeq STARFusion TCGA_RNA-Seq TRAM2-SUPT3H TRAM2 chr6 52400581 - SUPT3H chr6 44797594 - Exonic hg19 OV TCGA-13-0730-01A 18 4 Out-of-frame Intra-chr p12.2 p21.1 41110 ChimerSeq STARFusion TCGA_RNA-Seq DMTN-NPM2 DMTN chr8 21931346 + NPM2 chr8 21890641 + Exonic hg19 OV TCGA-13-0730-01A 7 1 Out-of-frame Intra-chr p21.3 p21.3 Seq+ 41111 ChimerSeq STARFusion TCGA_RNA-Seq GRIK4-SESN1 GRIK4 chr11 120745952 + SESN1 chr6 109323546 - Exonic hg19 OV TCGA-04-1514-01A 11 1 In-Frame Inter-chr q23.3 q21 Seq+ 41112 ChimerSeq STARFusion TCGA_RNA-Seq UTP18-ITGB3 UTP18 chr17 49338287 + ITGB3 chr17 45351785 + Exonic hg19 OV TCGA-04-1514-01A 7 4 Out-of-frame Intra-chr q21.33 q21.32 Oncogene Tumor suppressor gene Seq+ 41113 ChimerSeq STARFusion TCGA_RNA-Seq UTP18-ITGB3 UTP18 chr17 49338287 + ITGB3 chr17 45351785 + Exonic hg19 OV TCGA-04-1514-01A 7 4 Out-of-frame Intra-chr q21.33 q21.32 Oncogene Tumor suppressor gene Seq+ 41114 ChimerSeq STARFusion TCGA_RNA-Seq SSBP2-SERINC5 SSBP2 chr5 80762793 - SERINC5 chr5 79407525 - Exonic hg19 OV TCGA-04-1542-01A 47 1 CDS-3'UTR Intra-chr q14.1 Tumor suppressor gene q14.1 Seq+ 41115 ChimerSeq STARFusion TCGA_RNA-Seq PARD3-CCNY PARD3 chr10 35103804 - CCNY chr10 35537037 + Exonic hg19 OV TCGA-04-1542-01A 22 5 CDS-5'UTR Intra-chr p11.21 p11.21 Seq+ 41116 ChimerSeq STARFusion TCGA_RNA-Seq DIAPH1-RASA3 DIAPH1 chr5 140894621 - RASA3 chr13 114843474 - Exonic hg19 OV TCGA-04-1542-01A 7 0 Out-of-frame Inter-chr q31.3 41117 ChimerSeq STARFusion TCGA_RNA-Seq PARD3-CCNY PARD3 chr10 35103804 - CCNY chr10 35772332 + Exonic hg19 OV TCGA-04-1542-01A 4 5 Out-of-frame Intra-chr p11.21 p11.21 Seq+ 41118 ChimerSeq STARFusion TCGA_RNA-Seq ZNF567-GADD45GIP1 ZNF567 chr19 37180399 + GADD45GIP1 chr19 13065340 - Exonic hg19 OV TCGA-09-2054-01A 41 9 5'UTR-CDS Intra-chr q13.12 Transcription factor p13.13 Tumor suppressor gene Seq+ 41119 ChimerSeq STARFusion TCGA_RNA-Seq TIMM44-DAND5 TIMM44 chr19 8008492 - DAND5 chr19 13084203 + Exonic hg19 OV TCGA-09-2054-01A 12 2 In-Frame Intra-chr p13.2 p13.13 Seq+ 41120 ChimerSeq STARFusion TCGA_RNA-Seq C19orf52-PDE4A C19orf52 chr19 11040273 + PDE4A chr19 10574469 + Exonic hg19 OV TCGA-09-2054-01A 9 4 Out-of-frame Intra-chr p13.2 41121 ChimerSeq STARFusion TCGA_RNA-Seq TIMM44-NFIX TIMM44 chr19 8008492 - NFIX chr19 13135835 + Exonic hg19 OV TCGA-09-2054-01A 8 1 In-Frame Intra-chr p13.2 p13.13 Transcription factor 41122 ChimerSeq STARFusion TCGA_RNA-Seq C19orf52-PDE4A C19orf52 chr19 11040684 + PDE4A chr19 10574469 + Exonic hg19 OV TCGA-09-2054-01A 6 4 3'UTR-CDS Intra-chr p13.2 41123 ChimerSeq STARFusion TCGA_RNA-Seq SYNPO-NFYC SYNPO chr5 150004469 + NFYC chr1 41228560 + Exonic hg19 OV TCGA-09-2054-01A 6 3 5'UTR-CDS Inter-chr q33.1 p34.2 Transcription factor Seq+ 41124 ChimerSeq STARFusion TCGA_RNA-Seq ZNF727-STRIP2 ZNF727 chr7 63529987 + STRIP2 chr7 129079863 + Exonic hg19 OV TCGA-09-2054-01A 6 2 Out-of-frame Intra-chr q11.21 Transcription factor q32.1 Seq+ 41125 ChimerSeq STARFusion TCGA_RNA-Seq BIRC6-TTC27 BIRC6 chr2 32704685 + TTC27 chr2 33002949 + Exonic hg19 OV TCGA-09-2054-01A 6 0 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 41126 ChimerSeq STARFusion TCGA_RNA-Seq FOCAD-FBXO10 FOCAD chr9 20885229 + FBXO10 chr9 37529257 - Exonic hg19 OV TCGA-09-2054-01A 6 0 In-Frame Intra-chr p21.3 p13.2 Seq+ 41127 ChimerSeq STARFusion TCGA_RNA-Seq FAM63A-POGZ FAM63A chr1 150973726 - POGZ chr1 151381304 - Exonic hg19 OV TCGA-09-2054-01A 3 4 In-Frame Intra-chr q21.3 41128 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-NEK8 FAM222B chr17 27093604 - NEK8 chr17 27061001 + Exonic hg19 OV TCGA-24-1431-01A 492 277 Out-of-frame Intra-chr q11.2 q11.2 Other:NEK Seq+ 41129 ChimerSeq STARFusion TCGA_RNA-Seq AP2A1-FCGRT AP2A1 chr19 50306710 + FCGRT chr19 50029267 + Exonic hg19 OV TCGA-24-1431-01A 263 145 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 41130 ChimerSeq STARFusion TCGA_RNA-Seq SORL1-SC5D SORL1 chr11 121393698 + SC5D chr11 121177766 + Exonic hg19 OV TCGA-24-1431-01A 126 66 Out-of-frame Intra-chr q24.1 q23.3 Seq+ 41131 ChimerSeq STARFusion TCGA_RNA-Seq SCYL1-FRMD8 SCYL1 chr11 65300276 + FRMD8 chr11 65172335 + Exonic hg19 OV TCGA-24-1431-01A 73 54 In-Frame Intra-chr q13.1 Other:SCY1 Tumor suppressor gene q13.1 Seq+ 41132 ChimerSeq STARFusion TCGA_RNA-Seq PPP1CB-PLB1 PPP1CB chr2 28999848 + PLB1 chr2 28796064 + Exonic hg19 OV TCGA-24-1431-01A 66 27 In-Frame Intra-chr p23.2 p23.2 Seq+ 41133 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1199-ABHD17C KIAA1199 chr15 81230320 + ABHD17C chr15 81041854 + Exonic hg19 OV TCGA-24-1431-01A 30 8 Out-of-frame Intra-chr q25.1 41134 ChimerSeq STARFusion TCGA_RNA-Seq TAX1BP3-PMP22 TAX1BP3 chr17 3567489 - PMP22 chr17 15134397 - Exonic hg19 OV TCGA-24-1431-01A 15 35 Out-of-frame Intra-chr p13.2 p12 Seq+ 41135 ChimerSeq STARFusion TCGA_RNA-Seq TAX1BP3-PMP22 TAX1BP3 chr17 3567973 - PMP22 chr17 15134397 - Exonic hg19 OV TCGA-24-1431-01A 13 35 Out-of-frame Intra-chr p13.2 p12 Seq+ 41136 ChimerSeq STARFusion TCGA_RNA-Seq PTBP1-LPPR3 PTBP1 chr19 810799 + LPPR3 chr19 815851 - Exonic hg19 OV TCGA-24-1431-01A 18 8 Out-of-frame Intra-chr p13.3 41137 ChimerSeq STARFusion TCGA_RNA-Seq NFIC-CELF5 NFIC chr19 3382241 + CELF5 chr19 3273870 + Exonic hg19 OV TCGA-24-1431-01A 16 11 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 41138 ChimerSeq STARFusion TCGA_RNA-Seq CEP170B-ADSSL1 CEP170B chr14 105360186 + ADSSL1 chr14 105212573 + Exonic hg19 OV TCGA-24-1431-01A 13 9 Out-of-frame Intra-chr q32.33 q32.33 Seq+ 41139 ChimerSeq STARFusion TCGA_RNA-Seq SORL1-TECTA SORL1 chr11 121393698 + TECTA chr11 121058541 + Exonic hg19 OV TCGA-24-1431-01A 10 18 Out-of-frame Intra-chr q24.1 q23.3 Seq+ 41140 ChimerSeq STARFusion TCGA_RNA-Seq PTBP1-LPPR3 PTBP1 chr19 810915 + LPPR3 chr19 815854 - Exonic hg19 OV TCGA-24-1431-01A 12 8 Out-of-frame Intra-chr p13.3 41141 ChimerSeq STARFusion TCGA_RNA-Seq SIGIRR-DEAF1 SIGIRR chr11 407062 - DEAF1 chr11 644654 - Exonic hg19 OV TCGA-24-1431-01A 11 9 Out-of-frame Intra-chr p15.5 Transcription factor Seq+ 41142 ChimerSeq STARFusion TCGA_RNA-Seq UBA3-RBM6 UBA3 chr3 69110965 - RBM6 chr3 50091768 + Exonic hg19 OV TCGA-24-1431-01A 11 5 Out-of-frame Intra-chr p14.1 p21.31 Tumor suppressor gene Seq+ 41143 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-24-1431-01A 9 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41144 ChimerSeq STARFusion TCGA_RNA-Seq SORL1-TECTA SORL1 chr11 121340832 + TECTA chr11 120989015 + Exonic hg19 OV TCGA-24-1431-01A 4 18 Out-of-frame Intra-chr q24.1 q23.3 Seq+ 41145 ChimerSeq STARFusion TCGA_RNA-Seq ZNF790-LINC00665 ZNF790 chr19 37340904 - LINC00665 chr19 36812932 - Exonic hg19 OV TCGA-24-1431-01A 7 5 Out-of-frame Intra-chr q13.12 Transcription factor q13.12 41146 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-PIAS4 SBNO2 chr19 1174171 - PIAS4 chr19 4012921 + Exonic hg19 OV TCGA-24-1431-01A 4 13 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 41147 ChimerSeq STARFusion TCGA_RNA-Seq SIGIRR-DEAF1 SIGIRR chr11 406843 - DEAF1 chr11 644654 - Exonic hg19 OV TCGA-24-1431-01A 5 9 In-Frame Intra-chr p15.5 Transcription factor Seq+ 41148 ChimerSeq STARFusion TCGA_RNA-Seq ZNF790-LINC00665 ZNF790 chr19 37329239 - LINC00665 chr19 36812932 - Exonic hg19 OV TCGA-24-1431-01A 5 5 Out-of-frame Intra-chr q13.12 Transcription factor q13.12 41149 ChimerSeq STARFusion TCGA_RNA-Seq EEF1A1-RPS11 EEF1A1 chr6 74227858 - RPS11 chr19 49999707 + Exonic hg19 OV TCGA-24-1431-01A 3 11 Out-of-frame Inter-chr q13 Tumor suppressor gene q13.33 41150 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-PIAS4 SBNO2 chr19 1168693 - PIAS4 chr19 4012921 + Exonic hg19 OV TCGA-24-1431-01A 2 13 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 41151 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61665880 - ANK3 chr10 61789584 - Exonic hg19 OV TCGA-04-1517-01A 407 279 CDS-3'UTR Intra-chr q21.2 q21.2 Seq+ 41152 ChimerSeq STARFusion TCGA_RNA-Seq MTMR3-UQCR10 MTMR3 chr22 30279348 + UQCR10 chr22 30165667 + Exonic hg19 OV TCGA-04-1517-01A 346 137 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 41153 ChimerSeq STARFusion TCGA_RNA-Seq FUT8-FNTB FUT8 chr14 65922436 + FNTB chr14 65494171 + Exonic hg19 OV TCGA-04-1517-01A 138 111 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 41154 ChimerSeq STARFusion TCGA_RNA-Seq PIEZO1-GALNS PIEZO1 chr16 88804120 - GALNS chr16 88880736 - Exonic hg19 OV TCGA-04-1517-01A 77 55 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 41155 ChimerSeq STARFusion TCGA_RNA-Seq PIEZO1-GALNS PIEZO1 chr16 88815792 - GALNS chr16 88880933 - Exonic hg19 OV TCGA-04-1517-01A 57 55 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 41156 ChimerSeq STARFusion TCGA_RNA-Seq MIDN-MAP7D1 MIDN chr19 1255693 + MAP7D1 chr1 36643474 + Exonic hg19 OV TCGA-04-1517-01A 57 36 Out-of-frame Inter-chr p13.3 p34.3 Seq+ 41157 ChimerSeq STARFusion TCGA_RNA-Seq EVPL-SRP68 EVPL chr17 74019373 - SRP68 chr17 74041467 - Exonic hg19 OV TCGA-04-1517-01A 56 32 In-Frame Intra-chr q25.1 q25.1 Seq+ 41158 ChimerSeq STARFusion TCGA_RNA-Seq ARMC9-PSMD1 ARMC9 chr2 232100094 + PSMD1 chr2 232018278 + Exonic hg19 OV TCGA-04-1517-01A 42 27 In-Frame Intra-chr q37.1 q37.1 Seq+ 41159 ChimerSeq STARFusion TCGA_RNA-Seq RAB40C-RAD51B RAB40C chr16 640433 + RAD51B chr14 68758601 + Exonic hg19 OV TCGA-04-1517-01A 30 20 Out-of-frame Inter-chr p13.3 q24.1 Seq+ 41160 ChimerSeq STARFusion TCGA_RNA-Seq SOGA1-SAMHD1 SOGA1 chr20 35467620 - SAMHD1 chr20 35547922 - Exonic hg19 OV TCGA-04-1517-01A 28 20 In-Frame Intra-chr q11.23 q11.23 Seq+ 41161 ChimerSeq STARFusion TCGA_RNA-Seq PIEZO1-APRT PIEZO1 chr16 88815792 - APRT chr16 88876964 - Exonic hg19 OV TCGA-04-1517-01A 23 24 In-Frame Intra-chr q24.3 q24.3 Seq+ 41162 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF2-GON4L ARHGEF2 chr1 155924693 - GON4L chr1 155755165 - Exonic hg19 OV TCGA-04-1517-01A 26 7 In-Frame Intra-chr q22 q22 Seq+ 41163 ChimerSeq STARFusion TCGA_RNA-Seq THRAP3-STK11 THRAP3 chr1 36690106 + STK11 chr19 1218416 + Exonic hg19 OV TCGA-04-1517-01A 23 8 5'UTR-CDS Inter-chr p34.3 p13.3 Oncogene Tumor suppressor gene Seq+ 41164 ChimerSeq STARFusion TCGA_RNA-Seq GRB2-CASKIN2 GRB2 chr17 73367940 - CASKIN2 chr17 73499220 - Exonic hg19 OV TCGA-04-1517-01A 15 14 Out-of-frame Intra-chr q25.1 q25.1 41165 ChimerSeq STARFusion TCGA_RNA-Seq WDR66-JUP WDR66 chr12 122400068 + JUP chr17 39912466 - Exonic hg19 OV TCGA-04-1517-01A 16 9 Out-of-frame Inter-chr q24.31 q21.2 Tumor suppressor gene Seq+ 41166 ChimerSeq STARFusion TCGA_RNA-Seq PIEZO1-APRT PIEZO1 chr16 88815792 - APRT chr16 88876556 - Exonic hg19 OV TCGA-04-1517-01A 11 24 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 41167 ChimerSeq STARFusion TCGA_RNA-Seq GRB2-CKB GRB2 chr17 73389632 - CKB chr14 103988842 - Exonic hg19 OV TCGA-04-1517-01A 13 9 CDS-5'UTR Inter-chr q25.1 q32.33 Seq+ 41168 ChimerSeq STARFusion TCGA_RNA-Seq TOMM40-PVR TOMM40 chr19 45397323 + PVR chr19 45150495 + Exonic hg19 OV TCGA-04-1517-01A 14 3 In-Frame Intra-chr q13.32 q13.31 41169 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K6-AHDC1 MAP3K6 chr1 27690408 - AHDC1 chr1 27861427 - Exonic hg19 OV TCGA-04-1517-01A 10 13 CDS-3'UTR Intra-chr p36.11 STE:STE11 p35.3 Transcription factor Seq+ 41170 ChimerSeq STARFusion TCGA_RNA-Seq THRAP3-STK11 THRAP3 chr1 36690106 + STK11 chr19 1216267 + Exonic hg19 OV TCGA-04-1517-01A 10 8 5'UTR-CDS Inter-chr p34.3 p13.3 Oncogene Tumor suppressor gene Seq+ 41171 ChimerSeq STARFusion TCGA_RNA-Seq DHX8-ARL4D DHX8 chr17 41577471 + ARL4D chr17 41477029 + Exonic hg19 OV TCGA-04-1517-01A 9 6 CDS-5'UTR Intra-chr q21.31 q21.31 Seq+ 41172 ChimerSeq STARFusion TCGA_RNA-Seq PIEZO1-APRT PIEZO1 chr16 88815792 - APRT chr16 88878064 - Exonic hg19 OV TCGA-04-1517-01A 4 24 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 41173 ChimerSeq STARFusion TCGA_RNA-Seq RAB40C-RAD51B RAB40C chr16 640433 + RAD51B chr14 68878141 + Exonic hg19 OV TCGA-04-1517-01A 4 17 In-Frame Inter-chr p13.3 q24.1 Seq+ 41174 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K6-AHDC1 MAP3K6 chr1 27688196 - AHDC1 chr1 27861427 - Exonic hg19 OV TCGA-04-1517-01A 4 13 CDS-3'UTR Intra-chr p36.11 STE:STE11 p35.3 Transcription factor Seq+ 41175 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K6-AHDC1 MAP3K6 chr1 27689933 - AHDC1 chr1 27861427 - Exonic hg19 OV TCGA-04-1517-01A 2 13 CDS-3'UTR Intra-chr p36.11 STE:STE11 p35.3 Transcription factor Seq+ 41176 ChimerSeq STARFusion TCGA_RNA-Seq CAAP1-TNNI3K CAAP1 chr9 26861064 - TNNI3K chr1 74832940 + Exonic hg19 OV TCGA-61-2095-01A 42 3 In-Frame Inter-chr p21.2 p31.1 Seq+ 41177 ChimerSeq STARFusion TCGA_RNA-Seq CRYZ-VPS13D CRYZ chr1 75184893 - VPS13D chr1 12475140 + Exonic hg19 OV TCGA-61-2095-01A 26 1 Out-of-frame Intra-chr p31.1 p36.22 Seq+ 41178 ChimerSeq STARFusion TCGA_RNA-Seq ZMYND8-SULF2 ZMYND8 chr20 45976600 - SULF2 chr20 46319039 - Exonic hg19 OV TCGA-09-1673-01A 269 415 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 41179 ChimerSeq STARFusion TCGA_RNA-Seq LDLRAD4-IMPA2 LDLRAD4 chr18 13278187 + IMPA2 chr18 11999053 + Exonic hg19 OV TCGA-09-1673-01A 59 25 Out-of-frame Intra-chr p11.21 p11.21 41180 ChimerSeq STARFusion TCGA_RNA-Seq PCCA-MBNL2 PCCA chr13 100861717 + MBNL2 chr13 97986530 + Exonic hg19 OV TCGA-09-1673-01A 37 21 In-Frame Intra-chr q32.3 q32.1 Transcription factor Seq+ 41181 ChimerSeq STARFusion TCGA_RNA-Seq RSBN1L-RHBDD2 RSBN1L chr7 77326372 + RHBDD2 chr7 75511147 + Exonic hg19 OV TCGA-09-1673-01A 21 20 In-Frame Intra-chr q11.23 q11.23 Seq+ 41182 ChimerSeq STARFusion TCGA_RNA-Seq PARD3-ARHGAP24 PARD3 chr10 34805907 - ARHGAP24 chr4 86491675 + Exonic hg19 OV TCGA-09-1673-01A 22 11 CDS-5'UTR Inter-chr p11.21 q21.23 Seq+ 41183 ChimerSeq STARFusion TCGA_RNA-Seq CHD6-NCOA5 CHD6 chr20 40246979 - NCOA5 chr20 44691528 - Exonic hg19 OV TCGA-09-1673-01A 22 5 5'UTR-CDS Intra-chr q12 q13.12 Tumor suppressor gene Seq+ 41184 ChimerSeq STARFusion TCGA_RNA-Seq RALBP1-RAB31 RALBP1 chr18 9475689 + RAB31 chr18 9775275 + Exonic hg19 OV TCGA-09-1673-01A 19 16 5'UTR-CDS Intra-chr p11.22 p11.22 Seq+ 41185 ChimerSeq STARFusion TCGA_RNA-Seq ZNF512-KCNK3 ZNF512 chr2 27840438 + KCNK3 chr2 26950535 + Exonic hg19 OV TCGA-09-1673-01A 20 11 Out-of-frame Intra-chr p23.3 Transcription factor p23.3 Seq+ 41186 ChimerSeq STARFusion TCGA_RNA-Seq KCTD21-NARS2 KCTD21 chr11 77899619 - NARS2 chr11 78154804 - Exonic hg19 OV TCGA-09-1673-01A 21 5 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 41187 ChimerSeq STARFusion TCGA_RNA-Seq CORO1C-ATXN2 CORO1C chr12 109094900 - ATXN2 chr12 111926584 - Exonic hg19 OV TCGA-09-1673-01A 19 12 In-Frame Intra-chr q24.11 q24.12 Seq+ 41188 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-UBE2D2 SNHG3 chr1 28834672 + UBE2D2 chr5 138979957 + Exonic hg19 OV TCGA-09-1673-01A 21 1 5'UTR-5'UTR Inter-chr p35.3 q31.2 41189 ChimerSeq STARFusion TCGA_RNA-Seq SPECC1L-TMEM62 SPECC1L chr22 24743144 + TMEM62 chr15 43461791 + Exonic hg19 OV TCGA-09-1673-01A 14 16 Out-of-frame Inter-chr q11.23 q15.2 Seq+ 41190 ChimerSeq STARFusion TCGA_RNA-Seq CDK12-SMG6 CDK12 chr17 37657692 + SMG6 chr17 1985250 - Exonic hg19 OV TCGA-09-1673-01A 12 16 Out-of-frame Intra-chr q12 Oncogene p13.3 Seq+ 41191 ChimerSeq STARFusion TCGA_RNA-Seq ADD2-ANTXR1 ADD2 chr2 70995018 - ANTXR1 chr2 69329974 + Exonic hg19 OV TCGA-09-1673-01A 14 6 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 41192 ChimerSeq STARFusion TCGA_RNA-Seq UHRF1BP1-HCG22 UHRF1BP1 chr6 34760071 + HCG22 chr6 31023487 + Exonic hg19 OV TCGA-09-1673-01A 12 14 CDS-5'UTR Intra-chr p21.31 Seq+ 41193 ChimerSeq STARFusion TCGA_RNA-Seq KLHL14-CCDC178 KLHL14 chr18 30260132 - CCDC178 chr18 30554645 - Exonic hg19 OV TCGA-09-1673-01A 9 12 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 41194 ChimerSeq STARFusion TCGA_RNA-Seq ECE1-SRSF10 ECE1 chr1 21573714 - SRSF10 chr1 24305307 - Exonic hg19 OV TCGA-09-1673-01A 8 10 In-Frame Intra-chr p36.12 p36.11 Seq+ 41195 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-HMGB1 RCC1 chr1 28834672 + HMGB1 chr13 31037831 - Exonic hg19 OV TCGA-09-1673-01A 10 1 5'UTR-5'UTR Inter-chr p35.3 q12.3 41196 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-HMGB1 SNHG3 chr1 28834672 + HMGB1 chr13 31037831 - Exonic hg19 OV TCGA-09-1673-01A 10 1 5'UTR-5'UTR Inter-chr p35.3 q12.3 41197 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-GLUD1P6 RCC1 chr1 28834672 + GLUD1P6 chr10 48171409 - Exonic hg19 OV TCGA-09-1673-01A 10 0 Out-of-frame Inter-chr p35.3 41198 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-GLUD1P6 SNHG3 chr1 28834672 + GLUD1P6 chr10 48171409 - Exonic hg19 OV TCGA-09-1673-01A 10 0 Out-of-frame Inter-chr p35.3 41199 ChimerSeq STARFusion TCGA_RNA-Seq RALBP1-RAB31 RALBP1 chr18 9475174 + RAB31 chr18 9775275 + Exonic hg19 OV TCGA-09-1673-01A 4 16 5'UTR-CDS Intra-chr p11.22 p11.22 Seq+ 41200 ChimerSeq STARFusion TCGA_RNA-Seq RSBN1L-RHBDD2 RSBN1L chr7 77326372 + RHBDD2 chr7 75510683 + Exonic hg19 OV TCGA-09-1673-01A 3 20 CDS-5'UTR Intra-chr q11.23 q11.23 Seq+ 41201 ChimerSeq STARFusion TCGA_RNA-Seq SPECC1L-TMEM62 SPECC1L chr22 24743144 + TMEM62 chr15 43473379 + Exonic hg19 OV TCGA-09-1673-01A 4 16 In-Frame Inter-chr q11.23 q15.2 Seq+ 41202 ChimerSeq STARFusion TCGA_RNA-Seq HDAC1-PTPRU HDAC1 chr1 32768334 + PTPRU chr1 29581787 + Exonic hg19 OV TCGA-09-1673-01A 6 6 Out-of-frame Intra-chr p35.2 Tumor suppressor gene p35.3 Seq+ 41203 ChimerSeq STARFusion TCGA_RNA-Seq UHRF1BP1-HCG22 UHRF1BP1 chr6 34760071 + HCG22 chr6 31027185 + Exonic hg19 OV TCGA-09-1673-01A 3 14 CDS-5'UTR Intra-chr p21.31 Seq+ 41204 ChimerSeq STARFusion TCGA_RNA-Seq UHRF1BP1-HCG22 UHRF1BP1 chr6 34760071 + HCG22 chr6 31023589 + Exonic hg19 OV TCGA-09-1673-01A 3 14 CDS-5'UTR Intra-chr p21.31 Seq+ 41205 ChimerSeq STARFusion TCGA_RNA-Seq RALBP1-RAB31 RALBP1 chr18 9475689 + RAB31 chr18 9722739 + Exonic hg19 OV TCGA-09-1673-01A 2 16 5'UTR-CDS Intra-chr p11.22 p11.22 Seq+ 41206 ChimerSeq STARFusion TCGA_RNA-Seq CORO1C-ATXN2 CORO1C chr12 109094900 - ATXN2 chr12 111924628 - Exonic hg19 OV TCGA-09-1673-01A 2 12 Out-of-frame Intra-chr q24.11 q24.12 Seq+ 41207 ChimerSeq STARFusion TCGA_RNA-Seq MYC-PVT1 MYC chr8 128748869 + PVT1 chr8 129108764 + Exonic hg19 OV TCGA-59-2351-01A 161 15 CDS-5'UTR Intra-chr q24.21 Oncogene Transcription factor q24.21 Seq+ 41208 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106209411 - Exonic hg19 OV TCGA-59-2351-01A 74 0 Out-of-frame Inter-chr q21.2 32.33 41209 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076851 + IGHG1 chr14 106209411 - Exonic hg19 OV TCGA-59-2351-01A 74 0 Out-of-frame Inter-chr q21.2 q32.33 41210 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106111130 - Exonic hg19 OV TCGA-59-2351-01A 36 0 Out-of-frame Inter-chr q21.2 32.33 41211 ChimerSeq STARFusion TCGA_RNA-Seq SMAD3-MAP2K1 SMAD3 chr15 67358698 + MAP2K1 chr15 66727365 + Exonic hg19 OV TCGA-59-2351-01A 26 9 In-Frame Intra-chr q22.33 Transcription factor q22.31 STE:STE7 Oncogene Seq+ 41212 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106237746 - Exonic hg19 OV TCGA-59-2351-01A 18 0 Out-of-frame Inter-chr q21.2 32.33 41213 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076857 + IGH@ chr14 106237740 - Exonic hg19 OV TCGA-59-2351-01A 13 0 Out-of-frame Inter-chr q21.2 32.33 41214 ChimerSeq STARFusion TCGA_RNA-Seq STX5-WDR74 STX5 chr11 62594627 - WDR74 chr11 62601999 - Exonic hg19 OV TCGA-24-2289-01A 54 3 In-Frame Intra-chr q12.3 q12.3 Seq+ 41215 ChimerSeq STARFusion TCGA_RNA-Seq VPS37B-ABCB9 VPS37B chr12 123380499 - ABCB9 chr12 123416875 - Exonic hg19 OV TCGA-24-2289-01A 43 1 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 41216 ChimerSeq STARFusion TCGA_RNA-Seq BRWD1-DSCAM BRWD1 chr21 40641825 - DSCAM chr21 41385313 - Exonic hg19 OV TCGA-24-2289-01A 38 8 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 41217 ChimerSeq STARFusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2017357 - COL1A1 chr17 48264067 - Exonic hg19 OV TCGA-24-2289-01A 16 42 Out-of-frame Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 41218 ChimerSeq STARFusion TCGA_RNA-Seq CELF1-STK32A CELF1 chr11 47508302 - STK32A chr5 146703461 + Exonic hg19 OV TCGA-24-2289-01A 12 3 Out-of-frame Inter-chr p11.2 q32 Seq+ 41219 ChimerSeq STARFusion TCGA_RNA-Seq ERBB4-IDH1 ERBB4 chr2 212989477 - IDH1 chr2 209101893 - Exonic hg19 OV TCGA-24-2289-01A 11 0 Out-of-frame Intra-chr q34 Oncogene Tumor suppressor gene q34 Oncogene Tumor suppressor gene 41220 ChimerSeq STARFusion TCGA_RNA-Seq PPP3CC-PIWIL2 PPP3CC chr8 22298971 + PIWIL2 chr8 22171841 + Exonic hg19 OV TCGA-24-2289-01A 10 3 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.3 Tumor suppressor gene Seq+ 41221 ChimerSeq STARFusion TCGA_RNA-Seq SF3B3-CTCF SF3B3 chr16 70578436 + CTCF chr16 67660458 + Exonic hg19 OV TCGA-24-2289-01A 8 7 Out-of-frame Intra-chr q22.1 q22.1 Tumor suppressor gene Transcription factor Seq+ 41222 ChimerSeq STARFusion TCGA_RNA-Seq EBAG9-PKHD1L1 EBAG9 chr8 110566172 + PKHD1L1 chr8 110539013 + Exonic hg19 OV TCGA-24-2289-01A 8 2 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 41223 ChimerSeq STARFusion TCGA_RNA-Seq SF3B3-CTCF SF3B3 chr16 70578436 + CTCF chr16 67662273 + Exonic hg19 OV TCGA-24-2289-01A 3 7 In-Frame Intra-chr q22.1 q22.1 Tumor suppressor gene Transcription factor Seq+ 41224 ChimerSeq STARFusion TCGA_RNA-Seq POFUT2-LINC00316 POFUT2 chr21 46702264 - LINC00316 chr21 46758793 - Exonic hg19 OV TCGA-23-1118-01A 83 21 Out-of-frame Intra-chr q22.3 q22.3 41225 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-23-1118-01A 24 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41226 ChimerSeq STARFusion TCGA_RNA-Seq MFN2-PLOD1 MFN2 chr1 12042647 + PLOD1 chr1 12034710 + Exonic hg19 OV TCGA-23-1118-01A 22 6 5'UTR-CDS Intra-chr p36.22 p36.22 Seq+ 41227 ChimerSeq STARFusion TCGA_RNA-Seq PAK4-CACNG6 PAK4 chr19 39616559 + CACNG6 chr19 54501493 + Exonic hg19 OV TCGA-23-1118-01A 10 5 5'UTR-CDS Intra-chr q13.2 STE:STE20 q13.42 Seq+ 41228 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-23-1118-01A 11 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 41229 ChimerSeq STARFusion TCGA_RNA-Seq ILF3-WNT5B ILF3 chr19 10791806 + WNT5B chr12 1683834 + Exonic hg19 OV TCGA-23-1118-01A 9 1 CDS-5'UTR Inter-chr p13.2 p13.33 Seq+ 41230 ChimerSeq STARFusion TCGA_RNA-Seq RPL22-PTMA RPL22 chr1 6246763 - PTMA chr2 232576638 + Exonic hg19 OV TCGA-23-1118-01A 6 11 Out-of-frame Inter-chr p36.31 q37.1 41231 ChimerSeq STARFusion TCGA_RNA-Seq SRCAP-SLX1A SRCAP chr16 30727800 + SLX1A chr16 30208591 + Exonic hg19 OV TCGA-23-1118-01A 7 7 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 41232 ChimerSeq STARFusion TCGA_RNA-Seq DCAF7-MAP3K3 DCAF7 chr17 61628176 + MAP3K3 chr17 61729917 + Exonic hg19 OV TCGA-23-1118-01A 7 1 Out-of-frame Intra-chr q23.3 q23.3 STE:STE11 Seq+ 41233 ChimerSeq STARFusion TCGA_RNA-Seq PRKACA-ASF1B PRKACA chr19 14228314 - ASF1B chr19 14237049 - Exonic hg19 OV TCGA-23-1118-01A 5 3 In-Frame Intra-chr p13.12 p13.12 Seq+ 41234 ChimerSeq STARFusion TCGA_RNA-Seq MFN2-PLOD1 MFN2 chr1 12042171 + PLOD1 chr1 12034710 + Exonic hg19 OV TCGA-23-1118-01A 4 6 5'UTR-CDS Intra-chr p36.22 p36.22 Seq+ 41235 ChimerSeq STARFusion TCGA_RNA-Seq PAK4-CACNG6 PAK4 chr19 39616559 + CACNG6 chr19 54515205 + Exonic hg19 OV TCGA-23-1118-01A 3 5 5'UTR-CDS Intra-chr q13.2 STE:STE20 q13.42 Seq+ 41236 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0319L-PSMD4 KIAA0319L chr1 35972213 - PSMD4 chr1 151234637 + Exonic hg19 OV TCGA-23-1021-01B 4 2 Out-of-frame Intra-chr p34.3 q21.3 41237 ChimerSeq STARFusion TCGA_RNA-Seq SARNP-PTGES3 SARNP chr12 56211450 - PTGES3 chr12 57065631 - Exonic hg19 OV TCGA-30-1714-01A 133 1 In-Frame Intra-chr q13.2 q13.3 Seq+ 41238 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R4-PHYHD1 PPP2R4 chr9 131882889 + PHYHD1 chr9 131689317 + Exonic hg19 OV TCGA-30-1714-01A 19 3 In-Frame Intra-chr Tumor suppressor gene q34.11 Seq+ 41239 ChimerSeq STARFusion TCGA_RNA-Seq ACVR1-GNLY ACVR1 chr2 158732308 - GNLY chr2 85922443 + Exonic hg19 OV TCGA-30-1714-01A 15 5 5'UTR-CDS Intra-chr q24.1 p11.2 Seq+ 41240 ChimerSeq STARFusion TCGA_RNA-Seq CNNM2-RBP4 CNNM2 chr10 104679858 + RBP4 chr10 95353792 - Exonic hg19 OV TCGA-30-1714-01A 14 1 In-Frame Intra-chr q24.32 q23.33 Seq+ 41241 ChimerSeq STARFusion TCGA_RNA-Seq RNF115-NOTCH2NL RNF115 chr1 145650540 + NOTCH2NL chr1 145281369 + Exonic hg19 OV TCGA-30-1714-01A 11 2 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 41242 ChimerSeq STARFusion TCGA_RNA-Seq SPECC1L-CDH4 SPECC1L chr22 24765288 + CDH4 chr20 60427810 + Exonic hg19 OV TCGA-30-1714-01A 7 4 In-Frame Inter-chr q11.23 q13.33 Tumor suppressor gene Seq+ 41243 ChimerSeq STARFusion TCGA_RNA-Seq LMNA-FLAD1 LMNA chr1 156085065 + FLAD1 chr1 154965189 + Exonic hg19 OV TCGA-30-1714-01A 7 2 Out-of-frame Intra-chr q22 q21.3 Seq+ 41244 ChimerSeq STARFusion TCGA_RNA-Seq LMNA-FLAD1 LMNA chr1 156085065 + FLAD1 chr1 154960581 + Exonic hg19 OV TCGA-30-1714-01A 5 2 Out-of-frame Intra-chr q22 q21.3 Seq+ 41245 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-13-1404-01A 27 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41246 ChimerSeq STARFusion TCGA_RNA-Seq MBOAT7-LILRB5 MBOAT7 chr19 54682482 - LILRB5 chr19 54761107 - Exonic hg19 OV TCGA-13-1404-01A 11 3 CDS-5'UTR Intra-chr Seq+ 41247 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-13-1404-01A 10 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 41248 ChimerSeq STARFusion TCGA_RNA-Seq SEC31A-SCD5 SEC31A chr4 83812241 - SCD5 chr4 83557976 - Exonic hg19 OV TCGA-59-2352-01A 71 3 Out-of-frame Intra-chr q21.22 q21.22 Seq+ 41249 ChimerSeq STARFusion TCGA_RNA-Seq IER2-NACC1 IER2 chr19 13261366 + NACC1 chr19 13246014 + Exonic hg19 OV TCGA-59-2352-01A 34 4 5'UTR-5'UTR Intra-chr p13.13 p13.13 41250 ChimerSeq STARFusion TCGA_RNA-Seq PAFAH1B1-NTN1 PAFAH1B1 chr17 2497300 + NTN1 chr17 9066130 + Exonic hg19 OV TCGA-59-2352-01A 24 4 5'UTR-CDS Intra-chr p13.3 Tumor suppressor gene p13.1 Seq+ 41251 ChimerSeq STARFusion TCGA_RNA-Seq IER2-NACC1 IER2 chr19 13261352 + NACC1 chr19 13246011 + Exonic hg19 OV TCGA-59-2352-01A 17 4 Out-of-frame Intra-chr p13.13 p13.13 41252 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106209411 - Exonic hg19 OV TCGA-59-2352-01A 17 0 Out-of-frame Inter-chr q21.2 32.33 41253 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076851 + IGHG1 chr14 106209411 - Exonic hg19 OV TCGA-59-2352-01A 17 0 Out-of-frame Inter-chr q21.2 q32.33 41254 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106111130 - Exonic hg19 OV TCGA-59-2352-01A 12 0 Out-of-frame Inter-chr q21.2 32.33 41255 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-RP1L1 IGH@ chr14 106134862 - RP1L1 chr8 10466152 - Exonic hg19 OV TCGA-59-2352-01A 11 0 Out-of-frame Inter-chr 32.33 p23.1 41256 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-RP1L1 IGHG1 chr14 106134862 - RP1L1 chr8 10466152 - Exonic hg19 OV TCGA-59-2352-01A 11 0 Out-of-frame Inter-chr q32.33 p23.1 41257 ChimerSeq STARFusion TCGA_RNA-Seq IER2-NACC1 IER2 chr19 13264262 + NACC1 chr19 13246014 + Exonic hg19 OV TCGA-59-2352-01A 8 4 CDS-5'UTR Intra-chr p13.13 p13.13 41258 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106237746 - Exonic hg19 OV TCGA-59-2352-01A 8 0 Out-of-frame Inter-chr q21.2 32.33 41259 ChimerSeq STARFusion TCGA_RNA-Seq AMBRA1-HARBI1 AMBRA1 chr11 46615378 - HARBI1 chr11 46625459 - Exonic hg19 OV TCGA-13-0919-01A 70 7 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 41260 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-13-0919-01A 39 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41261 ChimerSeq STARFusion TCGA_RNA-Seq EWSR1-SMTN EWSR1 chr22 29674205 + SMTN chr22 31476436 + Exonic hg19 OV TCGA-61-2101-01A 42 4 CDS-5'UTR Intra-chr q12.2 q12.2 Seq+ 41262 ChimerSeq STARFusion TCGA_RNA-Seq DYRK1A-PHF6 DYRK1A chr21 38739930 + PHF6 chrX 133511602 + Exonic hg19 OV TCGA-61-2101-01A 35 11 5'UTR-5'UTR Inter-chr q22.13 CMGC:DYRK q26.2 Oncogene Tumor suppressor gene Seq+ 41263 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-61-2101-01A 21 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41264 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-61-2101-01A 17 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41265 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-61-2101-01A 14 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 41266 ChimerSeq STARFusion TCGA_RNA-Seq CAMK2D-FKBP8 CAMK2D chr4 114680476 - FKBP8 chr19 18644157 - Exonic hg19 OV TCGA-61-2101-01A 13 1 Out-of-frame Inter-chr q26 p13.11 41267 ChimerSeq STARFusion TCGA_RNA-Seq LARGE-CBX7 LARGE chr22 34157358 - CBX7 chr22 39545837 - Exonic hg19 OV TCGA-61-2101-01A 10 7 Out-of-frame Intra-chr q13.1 Seq+ 41268 ChimerSeq STARFusion TCGA_RNA-Seq RBFOX2-SELM RBFOX2 chr22 36334895 - SELM chr22 31515932 - Exonic hg19 OV TCGA-61-2101-01A 10 4 CDS-5'UTR Intra-chr 41269 ChimerSeq STARFusion TCGA_RNA-Seq SAC3D1-SNX15 SAC3D1 chr11 64809338 + SNX15 chr11 64807158 + Exonic hg19 OV TCGA-13-1511-01A 188 44 In-Frame Intra-chr q13.1 q13.1 Seq+ 41270 ChimerSeq STARFusion TCGA_RNA-Seq MSL2-STAG1 MSL2 chr3 135913814 - STAG1 chr3 136068205 - Exonic hg19 OV TCGA-13-1511-01A 99 21 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 41271 ChimerSeq STARFusion TCGA_RNA-Seq MRPS18C-ENOPH1 MRPS18C chr4 84378111 + ENOPH1 chr4 83369073 + Exonic hg19 OV TCGA-13-1511-01A 80 22 In-Frame Intra-chr q21.23 q21.22 Seq+ 41272 ChimerSeq STARFusion TCGA_RNA-Seq LTBP1-BRE LTBP1 chr2 33174012 + BRE chr2 28352138 + Exonic hg19 OV TCGA-13-1511-01A 53 9 Out-of-frame Intra-chr p22.3 Seq+ 41273 ChimerSeq STARFusion TCGA_RNA-Seq TLN2-FOXB1 TLN2 chr15 62950097 + FOXB1 chr15 60328309 + Exonic hg19 OV TCGA-13-1511-01A 41 15 CDS-3'UTR Intra-chr q22.2 q22.2 Transcription factor Seq+ 41274 ChimerSeq STARFusion TCGA_RNA-Seq MRPS18C-ENOPH1 MRPS18C chr4 84379582 + ENOPH1 chr4 83369073 + Exonic hg19 OV TCGA-13-1511-01A 36 22 In-Frame Intra-chr q21.23 q21.22 Seq+ 41275 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-13-1511-01A 37 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41276 ChimerSeq STARFusion TCGA_RNA-Seq UBE2D2-PSD2 UBE2D2 chr5 138994551 + PSD2 chr5 139188976 + Exonic hg19 OV TCGA-13-1511-01A 29 10 CDS-5'UTR Intra-chr q31.2 q31.2 Seq+ 41277 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-13-1511-01A 28 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 41278 ChimerSeq STARFusion TCGA_RNA-Seq VPS26A-LRRTM3 VPS26A chr10 70884036 + LRRTM3 chr10 68857345 + Exonic hg19 OV TCGA-13-1511-01A 22 13 In-Frame Intra-chr q22.1 q21.3 Seq+ 41279 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734942 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-13-1511-01A 25 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41280 ChimerSeq STARFusion TCGA_RNA-Seq PTPN9-SCAPER PTPN9 chr15 75871055 - SCAPER chr15 76726651 - Exonic hg19 OV TCGA-13-1511-01A 23 4 In-Frame Intra-chr q24.2 q24.3 Seq+ 41281 ChimerSeq STARFusion TCGA_RNA-Seq KRAS-IFLTD1 KRAS chr12 25398208 - IFLTD1 chr12 25656734 - Exonic hg19 OV TCGA-13-1511-01A 20 13 Out-of-frame Intra-chr p12.1 Oncogene Tumor suppressor gene Seq+ 41282 ChimerSeq STARFusion TCGA_RNA-Seq LUC7L-AXIN1 LUC7L chr16 249061 - AXIN1 chr16 364683 - Exonic hg19 OV TCGA-13-1511-01A 19 5 Out-of-frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Seq+ 41283 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN4-VPREB3 TSPAN4 chr11 850367 + VPREB3 chr22 24095385 - Exonic hg19 OV TCGA-13-1511-01A 17 6 Out-of-frame Inter-chr p15.5 q11.23 Seq+ 41284 ChimerSeq STARFusion TCGA_RNA-Seq SLC26A2-ARHGEF37 SLC26A2 chr5 149340542 + ARHGEF37 chr5 149003575 + Exonic hg19 OV TCGA-13-1511-01A 16 3 5'UTR-CDS Intra-chr q32 q32 Seq+ 41285 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-UBE2D2 SNHG3 chr1 28834672 + UBE2D2 chr5 138979957 + Exonic hg19 OV TCGA-13-1511-01A 16 2 5'UTR-5'UTR Inter-chr p35.3 q31.2 41286 ChimerSeq STARFusion TCGA_RNA-Seq LITAF-BCAR4 LITAF chr16 11680742 - BCAR4 chr16 11914154 - Exonic hg19 OV TCGA-13-1511-01A 12 1 5'UTR-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 41287 ChimerSeq STARFusion TCGA_RNA-Seq PTPLAD1-ANKDD1A PTPLAD1 chr15 65823056 + ANKDD1A chr15 65223020 + Exonic hg19 OV TCGA-13-1511-01A 11 2 In-Frame Intra-chr q22.31 Seq+ 41288 ChimerSeq STARFusion TCGA_RNA-Seq SEMA3F-RBM6 SEMA3F chr3 50197167 + RBM6 chr3 50000009 + Exonic hg19 OV TCGA-13-1511-01A 10 3 CDS-5'UTR Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene Seq+ 41289 ChimerSeq STARFusion TCGA_RNA-Seq TFRC-UBXN7 TFRC chr3 195796326 - UBXN7 chr3 196089558 - Exonic hg19 OV TCGA-13-1511-01A 10 3 In-Frame Intra-chr q29 q29 41290 ChimerSeq STARFusion TCGA_RNA-Seq SGPL1-ADAMTS14 SGPL1 chr10 72576636 + ADAMTS14 chr10 72517718 + Exonic hg19 OV TCGA-13-1511-01A 8 6 In-Frame Intra-chr q22.1 q22.1 Seq+ 41291 ChimerSeq STARFusion TCGA_RNA-Seq SGPL1-ADAMTS14 SGPL1 chr10 72576636 + ADAMTS14 chr10 72503304 + Exonic hg19 OV TCGA-13-1511-01A 7 6 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 41292 ChimerSeq STARFusion TCGA_RNA-Seq SGPL1-ADAMTS14 SGPL1 chr10 72576636 + ADAMTS14 chr10 72517931 + Exonic hg19 OV TCGA-13-1511-01A 7 6 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 41293 ChimerSeq STARFusion TCGA_RNA-Seq FAM32A-TPM4 FAM32A chr19 16296576 + TPM4 chr19 16186857 + Exonic hg19 OV TCGA-30-1718-01A 126 33 In-Frame Intra-chr p13.11 p13.12 Seq+ 41294 ChimerSeq STARFusion TCGA_RNA-Seq UBE2K-ENOPH1 UBE2K chr4 39757359 + ENOPH1 chr4 83375875 + Exonic hg19 OV TCGA-30-1718-01A 116 14 In-Frame Intra-chr p14 q21.22 Seq+ 41295 ChimerSeq STARFusion TCGA_RNA-Seq PEA15-C14orf182 PEA15 chr1 160175312 + C14orf182 chr14 50469705 - Exonic hg19 OV TCGA-30-1718-01A 92 25 5'UTR-CDS Inter-chr q23.2 Tumor suppressor gene 41296 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2B-NUP210L GATAD2B chr1 153895209 - NUP210L chr1 153965565 - Exonic hg19 OV TCGA-30-1718-01A 70 17 5'UTR-CDS Intra-chr Transcription factor q21.3 Seq+ 41297 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A29-WARS SLC25A29 chr14 100765179 - WARS chr14 100828258 - Exonic hg19 OV TCGA-30-1718-01A 57 18 In-Frame Intra-chr q32.2 q32.2 Seq+ 41298 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC1-MAP4 SMARCC1 chr3 47814307 - MAP4 chr3 47899002 - Exonic hg19 OV TCGA-30-1718-01A 46 12 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 41299 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-30-1718-01A 43 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41300 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPUL1-CYP2S1 HNRNPUL1 chr19 41807609 + CYP2S1 chr19 41703684 + Exonic hg19 OV TCGA-30-1718-01A 36 5 In-Frame Intra-chr q13.2 q13.2 41301 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-RSBN1L PTPN12 chr7 77166962 + RSBN1L chr7 77365727 + Exonic hg19 OV TCGA-30-1718-01A 33 2 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 41302 ChimerSeq STARFusion TCGA_RNA-Seq PEA15-C14orf182 PEA15 chr1 160175312 + C14orf182 chr14 50469667 - Exonic hg19 OV TCGA-30-1718-01A 25 25 5'UTR-CDS Inter-chr q23.2 Tumor suppressor gene 41303 ChimerSeq STARFusion TCGA_RNA-Seq HDAC1-LCK HDAC1 chr1 32782383 + LCK chr1 32739926 + Exonic hg19 OV TCGA-30-1718-01A 29 1 CDS-5'UTR Intra-chr p35.2 Tumor suppressor gene p35.2 TK:Src Oncogene Seq+ 41304 ChimerSeq STARFusion TCGA_RNA-Seq USP6NL-CCDC23 USP6NL chr10 11639630 - CCDC23 chr1 43282251 - Exonic hg19 OV TCGA-30-1718-01A 26 1 CDS-5'UTR Inter-chr p14 41305 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2B-NUP210L GATAD2B chr1 153895209 - NUP210L chr1 153965411 - Exonic hg19 OV TCGA-30-1718-01A 20 17 5'UTR-CDS Intra-chr Transcription factor q21.3 Seq+ 41306 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-30-1718-01A 24 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 41307 ChimerSeq STARFusion TCGA_RNA-Seq USP6NL-CCDC23 USP6NL chr10 11639630 - CCDC23 chr1 43273171 - Exonic hg19 OV TCGA-30-1718-01A 21 1 Out-of-frame Inter-chr p14 41308 ChimerSeq STARFusion TCGA_RNA-Seq GTF2I-EIF4HP1 GTF2I chr7 74131270 + EIF4HP1 chr7 27498221 - Exonic hg19 OV TCGA-30-1718-01A 20 4 Out-of-frame Intra-chr q11.23 Transcription factor p15.2 41309 ChimerSeq STARFusion TCGA_RNA-Seq TAF2-MRPL13 TAF2 chr8 120814034 - MRPL13 chr8 121393413 - Exonic hg19 OV TCGA-30-1718-01A 18 0 CDS-3'UTR Intra-chr q24.12 q24.12 41310 ChimerSeq STARFusion TCGA_RNA-Seq VAPA-SLC28A3 VAPA chr18 9914332 + SLC28A3 chr9 86928369 - Exonic hg19 OV TCGA-30-1718-01A 15 3 Out-of-frame Inter-chr p11.22 q21.33 Seq+ 41311 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A29-WARS SLC25A29 chr14 100772536 - WARS chr14 100828258 - Exonic hg19 OV TCGA-30-1718-01A 10 18 Out-of-frame Intra-chr q32.2 q32.2 Seq+ 41312 ChimerSeq STARFusion TCGA_RNA-Seq ANXA11-MAT1A ANXA11 chr10 81965099 - MAT1A chr10 82049434 - Exonic hg19 OV TCGA-30-1718-01A 14 0 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 41313 ChimerSeq STARFusion TCGA_RNA-Seq CLIC4-UBAP2L CLIC4 chr1 25072116 + UBAP2L chr1 154227312 + Exonic hg19 OV TCGA-30-1718-01A 11 0 In-Frame Intra-chr p36.11 q21.3 Seq+ 41314 ChimerSeq STARFusion TCGA_RNA-Seq MUC16-ZSWIM4 MUC16 chr19 9012774 - ZSWIM4 chr19 13936364 + Exonic hg19 OV TCGA-30-1718-01A 7 5 Out-of-frame Intra-chr p13.2 p13.13 Seq+ 41315 ChimerSeq STARFusion TCGA_RNA-Seq SPPL3-OASL SPPL3 chr12 121341648 - OASL chr12 121458861 - Exonic hg19 OV TCGA-36-1568-01A 76 15 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 41316 ChimerSeq STARFusion TCGA_RNA-Seq TANC1-PKP4 TANC1 chr2 160055564 + PKP4 chr2 159389692 + Exonic hg19 OV TCGA-36-1568-01A 33 11 CDS-5'UTR Intra-chr q24.2 q24.1 Seq+ 41317 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-36-1568-01A 32 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41318 ChimerSeq STARFusion TCGA_RNA-Seq TANC1-PKP4 TANC1 chr2 159922483 + PKP4 chr2 159389692 + Exonic hg19 OV TCGA-36-1568-01A 28 11 CDS-5'UTR Intra-chr q24.2 q24.1 Seq+ 41319 ChimerSeq STARFusion TCGA_RNA-Seq TPSAB1-PRSS27 TPSAB1 chr16 1291991 + PRSS27 chr16 2762815 - Exonic hg19 OV TCGA-36-1568-01A 23 0 In-Frame Intra-chr p13.3 p13.3 41320 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-36-1568-01A 15 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 41321 ChimerSeq STARFusion TCGA_RNA-Seq RIPK1-TTC27 RIPK1 chr6 3064293 + TTC27 chr2 32927874 + Exonic hg19 OV TCGA-36-1568-01A 12 2 5'UTR-CDS Inter-chr p25.2 TKL:RIPK p22.3 Seq+ 41322 ChimerSeq STARFusion TCGA_RNA-Seq MARK4-CKM MARK4 chr19 45754897 + CKM chr19 45810908 - Exonic hg19 OV TCGA-36-1568-01A 9 1 In-Frame Intra-chr q13.32 CAMK:CAMKL Oncogene q13.32 Seq+ 41323 ChimerSeq STARFusion TCGA_RNA-Seq KAZN-FHAD1 KAZN chr1 15287371 + FHAD1 chr1 15615895 + Exonic hg19 OV TCGA-36-1568-01A 7 6 Out-of-frame Intra-chr p36.21 p36.21 Seq+ 41324 ChimerSeq STARFusion TCGA_RNA-Seq BCAT1-SLCO1A2 BCAT1 chr12 24982757 - SLCO1A2 chr12 21487638 - Exonic hg19 OV TCGA-5X-AA5U-01A 40 10 CDS-5'UTR Intra-chr p12.1 p12.1 Seq+ 41325 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L3-ERC1 SIPA1L3 chr19 38579491 + ERC1 chr12 1192330 + Exonic hg19 OV TCGA-5X-AA5U-01A 31 4 In-Frame Inter-chr q13.13 Seq+ 41326 ChimerSeq STARFusion TCGA_RNA-Seq PIGN-TMEM241 PIGN chr18 59828366 - TMEM241 chr18 21001408 - Exonic hg19 OV TCGA-5X-AA5U-01A 29 6 In-Frame Intra-chr q21.33 q11.2 Seq+ 41327 ChimerSeq STARFusion TCGA_RNA-Seq BICD1-CYP2F1P BICD1 chr12 32260478 + CYP2F1P chr19 41324804 - Exonic hg19 OV TCGA-5X-AA5U-01A 28 6 Out-of-frame Inter-chr p11.21 41328 ChimerSeq STARFusion TCGA_RNA-Seq SARS2-SIPA1L3 SARS2 chr19 39416845 - SIPA1L3 chr19 38519729 + Exonic hg19 OV TCGA-5X-AA5U-01A 27 6 CDS-5'UTR Intra-chr q13.13 Seq+ 41329 ChimerSeq STARFusion TCGA_RNA-Seq BCAT1-SLCO1A2 BCAT1 chr12 24982757 - SLCO1A2 chr12 21487643 - Exonic hg19 OV TCGA-5X-AA5U-01A 14 10 CDS-5'UTR Intra-chr p12.1 p12.1 Seq+ 41330 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106209411 - Exonic hg19 OV TCGA-61-2012-01A 80 0 Out-of-frame Inter-chr q21.2 32.33 41331 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076851 + IGHG1 chr14 106209411 - Exonic hg19 OV TCGA-61-2012-01A 80 0 Out-of-frame Inter-chr q21.2 q32.33 41332 ChimerSeq STARFusion TCGA_RNA-Seq UBA2-ZNF536 UBA2 chr19 34941269 + ZNF536 chr19 31201664 + Exonic hg19 OV TCGA-61-2012-01A 73 9 CDS-3'UTR Intra-chr q13.11 q12 Transcription factor Seq+ 41333 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106111130 - Exonic hg19 OV TCGA-61-2012-01A 35 0 Out-of-frame Inter-chr q21.2 32.33 41334 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106237746 - Exonic hg19 OV TCGA-61-2012-01A 22 0 Out-of-frame Inter-chr q21.2 32.33 41335 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-BAI2 PUM1 chr1 31532051 - BAI2 chr1 32222416 - Exonic hg19 OV TCGA-61-2012-01A 12 2 In-Frame Intra-chr p35.2 41336 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076857 + IGH@ chr14 106237740 - Exonic hg19 OV TCGA-61-2012-01A 12 0 Out-of-frame Inter-chr q21.2 32.33 41337 ChimerSeq STARFusion TCGA_RNA-Seq PDE4D-DEPDC1B PDE4D chr5 59481384 - DEPDC1B chr5 59943360 - Exonic hg19 OV TCGA-61-2012-01A 11 1 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 41338 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-BAI2 PUM1 chr1 31528160 - BAI2 chr1 32222416 - Exonic hg19 OV TCGA-61-2012-01A 10 2 Out-of-frame Intra-chr p35.2 41339 ChimerSeq STARFusion TCGA_RNA-Seq PRMT1-CCDC155 PRMT1 chr19 50185516 + CCDC155 chr19 49910143 + Exonic hg19 OV TCGA-61-2012-01A 9 0 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 41340 ChimerSeq STARFusion TCGA_RNA-Seq SHMT1-SYNPO2L SHMT1 chr17 18250810 - SYNPO2L chr10 75414038 - Exonic hg19 OV TCGA-61-2012-01A 8 2 In-Frame Inter-chr p11.2 q22.2 41341 ChimerSeq STARFusion TCGA_RNA-Seq PRDM11-NSUN4 PRDM11 chr11 45169132 + NSUN4 chr1 46826376 + Exonic hg19 OV TCGA-61-2012-01A 8 1 5'UTR-5'UTR Inter-chr p11.2 Tumor suppressor gene p33 41342 ChimerSeq STARFusion TCGA_RNA-Seq RALY-ASIP RALY chr20 32581937 + ASIP chr20 32848171 + Exonic hg19 OV TCGA-61-2012-01A 7 1 5'UTR-5'UTR Intra-chr q11.22 q11.22 41343 ChimerSeq STARFusion TCGA_RNA-Seq PAK1-ZNF595 PAK1 chr11 77184597 - ZNF595 chr4 59323 + Exonic hg19 OV TCGA-61-2012-01A 6 3 5'UTR-CDS Inter-chr q14.1 STE:STE20 p16.3 Transcription factor Seq+ 41344 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-BAI2 PUM1 chr1 31532146 - BAI2 chr1 32210332 - Exonic hg19 OV TCGA-61-2012-01A 6 2 Out-of-frame Intra-chr p35.2 41345 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD1-KLHDC8A PCMTD1 chr8 52811490 - KLHDC8A chr1 205312921 - Exonic hg19 OV TCGA-29-2427-01A 50 11 5'UTR-5'UTR Inter-chr q11.23 q32.1 Seq+ 41346 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-29-2427-01A 16 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41347 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-29-2427-01A 15 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 41348 ChimerSeq STARFusion TCGA_RNA-Seq COASY-HSD17B1 COASY chr17 40714306 + HSD17B1 chr17 40704901 + Exonic hg19 OV TCGA-29-2427-01A 14 0 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 41349 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD1-KLHDC8A PCMTD1 chr8 52811490 - KLHDC8A chr1 205325697 - Exonic hg19 OV TCGA-29-2427-01A 10 11 5'UTR-5'UTR Inter-chr q11.23 q32.1 Seq+ 41350 ChimerSeq STARFusion TCGA_RNA-Seq PIAS3-REN PIAS3 chr1 145575404 + REN chr1 204131291 - Exonic hg19 OV TCGA-24-2024-01A 109 13 5'UTR-CDS Intra-chr q21.1 q32.1 Seq+ 41351 ChimerSeq STARFusion TCGA_RNA-Seq COL23A1-FAM193B COL23A1 chr5 177987683 - FAM193B chr5 176947182 - Exonic hg19 OV TCGA-24-2024-01A 66 13 CDS-3'UTR Intra-chr q35.3 q35.3 Seq+ 41352 ChimerSeq STARFusion TCGA_RNA-Seq PIAS3-REN PIAS3 chr1 145576102 + REN chr1 204131291 - Exonic hg19 OV TCGA-24-2024-01A 39 13 Out-of-frame Intra-chr q21.1 q32.1 Seq+ 41353 ChimerSeq STARFusion TCGA_RNA-Seq BAGE2-CTBP2P1 BAGE2 chr21 11058161 - CTBP2P1 chrY 59001440 + Exonic hg19 OV TCGA-24-2024-01A 25 1 Out-of-frame Inter-chr p11.2 41354 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-24-2024-01A 14 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 41355 ChimerSeq STARFusion TCGA_RNA-Seq TLK1-PRPF40A TLK1 chr2 171917591 - PRPF40A chr2 153537850 - Exonic hg19 OV TCGA-29-2425-01A 22 1 Out-of-frame Intra-chr q31.1 Other:TLK q23.3 Seq+ 41356 ChimerSeq STARFusion TCGA_RNA-Seq ZNF277-C15orf43 ZNF277 chr7 111936366 + C15orf43 chr15 45266065 + Exonic hg19 OV TCGA-29-2425-01A 19 1 Out-of-frame Inter-chr q31.1 Transcription factor 41357 ChimerSeq STARFusion TCGA_RNA-Seq GID4-LRRC48 GID4 chr17 17943216 + LRRC48 chr17 17907677 + Exonic hg19 OV TCGA-29-2425-01A 8 4 Out-of-frame Intra-chr p11.2 41358 ChimerSeq STARFusion TCGA_RNA-Seq ZNF805-ETFB ZNF805 chr19 57752289 + ETFB chr19 51857562 - Exonic hg19 OV TCGA-24-1551-01A 169 28 In-Frame Intra-chr q13.43 Transcription factor q13.41 Seq+ 41359 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC5-SMTNL1 ZDHHC5 chr11 57435659 + SMTNL1 chr11 57313354 + Exonic hg19 OV TCGA-24-1551-01A 152 32 5'UTR-CDS Intra-chr q12.1 q12.1 Seq+ 41360 ChimerSeq STARFusion TCGA_RNA-Seq CABIN1-MIF CABIN1 chr22 24530382 + MIF chr22 24236959 + Exonic hg19 OV TCGA-24-1551-01A 90 7 In-Frame Intra-chr q11.23 Tumor suppressor gene Seq+ 41361 ChimerSeq STARFusion TCGA_RNA-Seq CTCFL-POLR3H CTCFL chr20 56099259 - POLR3H chr22 41924830 - Exonic hg19 OV TCGA-24-1551-01A 32 4 Out-of-frame Inter-chr q13.31 Tumor suppressor gene Transcription factor q13.2 Seq+ 41362 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC2-SLC26A5 DNAJC2 chr7 102982211 - SLC26A5 chr7 102993373 - Exonic hg19 OV TCGA-24-1551-01A 26 10 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 41363 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-TSTA3 PTK2 chr8 141684397 - TSTA3 chr8 144698893 - Exonic hg19 OV TCGA-24-1551-01A 12 5 CDS-5'UTR Intra-chr q24.3 Seq+ 41364 ChimerSeq STARFusion TCGA_RNA-Seq CHCHD3-PTN CHCHD3 chr7 132570422 - PTN chr7 136939721 - Exonic hg19 OV TCGA-24-1551-01A 12 1 CDS-5'UTR Intra-chr q33 Transcription factor q33 41365 ChimerSeq STARFusion TCGA_RNA-Seq SRPK2-C7orf66 SRPK2 chr7 104844075 - C7orf66 chr7 108524641 - Exonic hg19 OV TCGA-24-1551-01A 10 2 CDS-5'UTR Intra-chr q22.3 CMGC:SRPK q31.1 41366 ChimerSeq STARFusion TCGA_RNA-Seq SET-GLE1 SET chr9 131446286 + GLE1 chr9 131284947 + Exonic hg19 OV TCGA-24-1551-01A 9 2 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 41367 ChimerSeq STARFusion TCGA_RNA-Seq NAB1-MFSD6 NAB1 chr2 191537878 + MFSD6 chr2 191353383 + Exonic hg19 OV TCGA-24-1551-01A 8 3 Out-of-frame Intra-chr q32.2 q32.2 Seq+ 41368 ChimerSeq STARFusion TCGA_RNA-Seq NEDD4L-TBC1D17 NEDD4L chr18 55919286 + TBC1D17 chr19 50381755 + Exonic hg19 OV TCGA-24-1551-01A 8 2 In-Frame Inter-chr q21.31 Tumor suppressor gene q13.33 Seq+ 41369 ChimerSeq STARFusion TCGA_RNA-Seq SGPL1-ADAMTS14 SGPL1 chr10 72576636 + ADAMTS14 chr10 72492010 + Exonic hg19 OV TCGA-24-1551-01A 8 2 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 41370 ChimerSeq STARFusion TCGA_RNA-Seq SET-GLE1 SET chr9 131447492 + GLE1 chr9 131284947 + Exonic hg19 OV TCGA-24-1551-01A 8 1 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 41371 ChimerSeq STARFusion TCGA_RNA-Seq NEDD4L-TBC1D17 NEDD4L chr18 55919286 + TBC1D17 chr19 50381400 + Exonic hg19 OV TCGA-24-1551-01A 7 2 In-Frame Inter-chr q21.31 Tumor suppressor gene q13.33 Seq+ 41372 ChimerSeq STARFusion TCGA_RNA-Seq UBE2D2-PAIP2 UBE2D2 chr5 138906197 + PAIP2 chr5 138699448 + Exonic hg19 OV TCGA-61-1738-01A 534 56 5'UTR-5'UTR Intra-chr q31.2 q31.2 Tumor suppressor gene Seq+ 41373 ChimerSeq STARFusion TCGA_RNA-Seq NF1-RBX1 NF1 chr17 29422387 + RBX1 chr22 41349559 + Exonic hg19 OV TCGA-61-1738-01A 102 12 In-Frame Inter-chr q11.2 Oncogene Tumor suppressor gene q13.2 Seq+ 41374 ChimerSeq STARFusion TCGA_RNA-Seq NF1-XPNPEP3 NF1 chr17 29422387 + XPNPEP3 chr22 41349559 + Exonic hg19 OV TCGA-61-1738-01A 102 12 CDS-3'UTR Inter-chr q11.2 Oncogene Tumor suppressor gene q13.2 41375 ChimerSeq STARFusion TCGA_RNA-Seq GDF15-MAST3 GDF15 chr19 18497276 + MAST3 chr19 18260001 + Exonic hg19 OV TCGA-61-1738-01A 96 15 In-Frame Intra-chr p13.11 p13.11 AGC:MAST Seq+ 41376 ChimerSeq STARFusion TCGA_RNA-Seq NCOA6-SLC10A1 NCOA6 chr20 33413275 - SLC10A1 chr14 70253024 - Exonic hg19 OV TCGA-61-1738-01A 75 19 5'UTR-CDS Inter-chr q11.22 q24.1 Seq+ 41377 ChimerSeq STARFusion TCGA_RNA-Seq SUMO2-POLR2K SUMO2 chr17 73178909 - POLR2K chr8 101163575 + Exonic hg19 OV TCGA-61-1738-01A 46 8 CDS-5'UTR Inter-chr q25.1 q22.2 Seq+ 41378 ChimerSeq STARFusion TCGA_RNA-Seq SUMO2-POLR2K SUMO2 chr17 73177152 - POLR2K chr8 101163575 + Exonic hg19 OV TCGA-61-1738-01A 31 3 CDS-5'UTR Inter-chr q25.1 q22.2 Seq+ 41379 ChimerSeq STARFusion TCGA_RNA-Seq AHDC1-IFI6 AHDC1 chr1 27873772 - IFI6 chr1 27992986 - Exonic hg19 OV TCGA-61-1738-01A 27 0 3'UTR-CDS Intra-chr p35.3 Transcription factor p35.3 Seq+ 41380 ChimerSeq STARFusion TCGA_RNA-Seq GATSL1-GTF2IRD1 GATSL1 chr7 74434317 + GTF2IRD1 chr7 73969504 + Exonic hg19 OV TCGA-61-1738-01A 25 2 In-Frame Intra-chr q11.23 Transcription factor 41381 ChimerSeq STARFusion TCGA_RNA-Seq ISM2-SPTLC2 ISM2 chr14 77964996 - SPTLC2 chr14 78063723 - Exonic hg19 OV TCGA-61-1738-01A 21 3 In-Frame Intra-chr q24.3 q24.3 Seq+ 41382 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-61-1738-01A 19 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41383 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-PDE4A DNM2 chr19 10829079 + PDE4A chr19 10556894 + Exonic hg19 OV TCGA-61-1738-01A 15 1 In-Frame Intra-chr p13.2 p13.2 Seq+ 41384 ChimerSeq STARFusion TCGA_RNA-Seq FOSL2-SNX17 FOSL2 chr2 28616689 + SNX17 chr2 27594136 + Exonic hg19 OV TCGA-61-1738-01A 14 3 In-Frame Intra-chr p23.2 Transcription factor p23.3 Seq+ 41385 ChimerSeq STARFusion TCGA_RNA-Seq EMC1-LINC00640 EMC1 chr1 19546061 - LINC00640 chr14 51832108 + Exonic hg19 OV TCGA-61-1738-01A 12 1 Out-of-frame Inter-chr p36.13 q22.1 41386 ChimerSeq STARFusion TCGA_RNA-Seq ARL8B-ITPR1 ARL8B chr3 5164273 + ITPR1 chr3 4722237 + Exonic hg19 OV TCGA-61-1738-01A 11 4 In-Frame Intra-chr p26.1 p26.1 Seq+ 41387 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-61-1738-01A 12 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 41388 ChimerSeq STARFusion TCGA_RNA-Seq CCSER2-GHITM CCSER2 chr10 86088564 + GHITM chr10 85910465 + Exonic hg19 OV TCGA-61-1738-01A 11 2 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 41389 ChimerSeq STARFusion TCGA_RNA-Seq CTCF-SPSB1 CTCF chr16 67655494 + SPSB1 chr1 9415802 + Exonic hg19 OV TCGA-61-1738-01A 10 5 CDS-5'UTR Inter-chr q22.1 Tumor suppressor gene Transcription factor p36.22 Seq+ 41390 ChimerSeq STARFusion TCGA_RNA-Seq GEMIN7-APOC1 GEMIN7 chr19 45583287 + APOC1 chr19 45422430 + Exonic hg19 OV TCGA-61-1738-01A 10 1 5'UTR-CDS Intra-chr q13.32 q13.32 Seq+ 41391 ChimerSeq STARFusion TCGA_RNA-Seq EXOC7-ACHE EXOC7 chr17 74083735 - ACHE chr7 100491876 - Exonic hg19 OV TCGA-61-1738-01A 7 2 CDS-5'UTR Inter-chr q25.1 q22.1 Tumor suppressor gene Seq+ 41392 ChimerSeq STARFusion TCGA_RNA-Seq ABCC3-KAT7 ABCC3 chr17 48712342 + KAT7 chr17 47893165 + Exonic hg19 OV TCGA-61-1738-01A 4 4 In-Frame Intra-chr q21.33 q21.33 Transcription factor Seq+ 41393 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890980 - BCAR4 chr16 11914154 - Exonic hg19 OV TCGA-13-1492-01A 39 24 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 41394 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890980 - BCAR4 chr16 11915612 - Exonic hg19 OV TCGA-13-1492-01A 5 24 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 41395 ChimerSeq STARFusion TCGA_RNA-Seq NUCB1-FAM83E NUCB1 chr19 49416821 + FAM83E chr19 49104626 - Exonic hg19 OV TCGA-20-0987-01A 73 28 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 41396 ChimerSeq STARFusion TCGA_RNA-Seq FAM129B-PTRH1 FAM129B chr9 130279136 - PTRH1 chr9 130457420 - Exonic hg19 OV TCGA-20-0987-01A 54 13 CDS-3'UTR Intra-chr q34.11 q34.11 Seq+ 41397 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-20-0987-01A 34 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41398 ChimerSeq STARFusion TCGA_RNA-Seq PMVK-PBXIP1 PMVK chr1 154904828 - PBXIP1 chr1 154926233 - Exonic hg19 OV TCGA-20-0987-01A 30 13 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 41399 ChimerSeq STARFusion TCGA_RNA-Seq NUCB1-FAM83E NUCB1 chr19 49416453 + FAM83E chr19 49104626 - Exonic hg19 OV TCGA-20-0987-01A 14 28 In-Frame Intra-chr q13.33 q13.33 Seq+ 41400 ChimerSeq STARFusion TCGA_RNA-Seq SRPK1-CPNE5 SRPK1 chr6 35888245 - CPNE5 chr6 36733153 - Exonic hg19 OV TCGA-20-0987-01A 14 24 In-Frame Intra-chr p21.31 CMGC:SRPK p21.2 Seq+ 41401 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069803 - Exonic hg19 OV TCGA-20-0987-01A 17 0 Out-of-frame Inter-chr q12.3 q32.2 41402 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-HID1 IGL@ chr22 22764610 + HID1 chr17 72968960 - Exonic hg19 OV TCGA-20-0987-01A 15 0 Out-of-frame Inter-chr q11.22 q25.1 41403 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-CPQ VPS13B chr8 100733275 + CPQ chr8 98078237 + Exonic hg19 OV TCGA-20-0987-01A 9 14 In-Frame Intra-chr q22.2 q22.1 Seq+ 41404 ChimerSeq STARFusion TCGA_RNA-Seq LAPTM4B-MTDH LAPTM4B chr8 98837381 + MTDH chr8 98735107 + Exonic hg19 OV TCGA-20-0987-01A 10 9 In-Frame Intra-chr q22.1 q22.1 Seq+ 41405 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734942 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-20-0987-01A 10 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41406 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-CPQ VPS13B chr8 100733275 + CPQ chr8 98067757 + Exonic hg19 OV TCGA-20-0987-01A 4 14 Out-of-frame Intra-chr q22.2 q22.1 Seq+ 41407 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-CDC42EP4 SLC39A11 chr17 71027695 - CDC42EP4 chr17 71282751 - Exonic hg19 OV TCGA-20-0987-01A 7 1 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 41408 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-20-0987-01A 7 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 41409 ChimerSeq STARFusion TCGA_RNA-Seq DERL2-NLRP1 DERL2 chr17 5383374 - NLRP1 chr17 5437308 - Exonic hg19 OV TCGA-20-0987-01A 6 2 In-Frame Intra-chr p13.2 p13.2 Oncogene Seq+ 41410 ChimerSeq STARFusion TCGA_RNA-Seq AREL1-SYNDIG1L AREL1 chr14 75151157 - SYNDIG1L chr14 74876504 - Exonic hg19 OV TCGA-20-0987-01A 4 8 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 41411 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT3-AGO3 AGPAT3 chr21 45285226 + AGO3 chr1 36492715 + Exonic hg19 OV TCGA-20-0987-01A 5 2 Out-of-frame Inter-chr q22.3 p34.3 Seq+ 41412 ChimerSeq STARFusion TCGA_RNA-Seq PICALM-ME3 PICALM chr11 85779693 - ME3 chr11 86270865 - Exonic hg19 OV TCGA-20-0987-01A 5 1 Out-of-frame Intra-chr q14.2 q14.2 Seq+ 41413 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 OV TCGA-20-0987-01A 5 0 Out-of-frame Inter-chr q13.33 p21.1 41414 ChimerSeq STARFusion TCGA_RNA-Seq CLDN4-CD74 CLDN4 chr7 73247000 + CD74 chr5 149792318 - Exonic hg19 OV TCGA-20-0987-01A 4 1 Out-of-frame Inter-chr q11.23 q33.1 41415 ChimerSeq STARFusion TCGA_RNA-Seq LAPTM4B-MTDH LAPTM4B chr8 98837381 + MTDH chr8 98736828 + Exonic hg19 OV TCGA-20-0987-01A 2 9 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 41416 ChimerSeq STARFusion TCGA_RNA-Seq AREL1-SYNDIG1L AREL1 chr14 75152303 - SYNDIG1L chr14 74876504 - Exonic hg19 OV TCGA-20-0987-01A 2 8 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 41417 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106209411 - Exonic hg19 OV TCGA-20-0987-01A 4 0 Out-of-frame Inter-chr q21.2 32.33 41418 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076851 + IGHG1 chr14 106209411 - Exonic hg19 OV TCGA-20-0987-01A 4 0 Out-of-frame Inter-chr q21.2 q32.33 41419 ChimerSeq STARFusion TCGA_RNA-Seq LINC00674-PTPN1 LINC00674 chr17 66099199 + PTPN1 chr20 49177900 + Exonic hg19 OV TCGA-20-0987-01A 2 3 Out-of-frame Inter-chr q24.2 q13.13 Tumor suppressor gene 41420 ChimerSeq STARFusion TCGA_RNA-Seq TMEM65-TATDN1 TMEM65 chr8 125384095 - TATDN1 chr8 125520929 - Exonic hg19 OV TCGA-20-0987-01A 2 2 Out-of-frame Intra-chr q24.13 q24.13 41421 ChimerSeq STARFusion TCGA_RNA-Seq TANC1-PKP4 TANC1 chr2 159825294 + PKP4 chr2 159530189 + Exonic hg19 OV TCGA-04-1365-01A 232 110 5'UTR-CDS Intra-chr q24.2 q24.1 Seq+ 41422 ChimerSeq STARFusion TCGA_RNA-Seq ZMYND8-EYA2 ZMYND8 chr20 45874752 - EYA2 chr20 45717878 + Exonic hg19 OV TCGA-04-1365-01A 192 61 In-Frame Intra-chr q13.12 q13.12 Seq+ 41423 ChimerSeq STARFusion TCGA_RNA-Seq MAST3-PDE4C MAST3 chr19 18252825 + PDE4C chr19 18362971 - Exonic hg19 OV TCGA-04-1365-01A 147 40 CDS-5'UTR Intra-chr p13.11 AGC:MAST p13.11 Seq+ 41424 ChimerSeq STARFusion TCGA_RNA-Seq CCDC37-BCAM CCDC37 chr3 126152026 + BCAM chr19 45322835 + Exonic hg19 OV TCGA-04-1365-01A 48 0 Out-of-frame Inter-chr q13.32 41425 ChimerSeq STARFusion TCGA_RNA-Seq YWHAH-SLC5A1 YWHAH chr22 32340806 + SLC5A1 chr22 32445930 + Exonic hg19 OV TCGA-04-1365-01A 32 4 In-Frame Intra-chr q12.3 q12.3 41426 ChimerSeq STARFusion TCGA_RNA-Seq CDC42BPB-SYNJ2BP CDC42BPB chr14 103414058 - SYNJ2BP chr14 70842488 - Exonic hg19 OV TCGA-04-1365-01A 28 18 In-Frame Intra-chr q32.32 q24.2 Seq+ 41427 ChimerSeq STARFusion TCGA_RNA-Seq DDX21-STOX1 DDX21 chr10 70716068 + STOX1 chr10 70641714 + Exonic hg19 OV TCGA-04-1365-01A 21 7 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 41428 ChimerSeq STARFusion TCGA_RNA-Seq CLVS1-RAB2A CLVS1 chr8 61969789 + RAB2A chr8 61531139 + Exonic hg19 OV TCGA-04-1365-01A 19 8 5'UTR-CDS Intra-chr q12.2 q12.1 Seq+ 41429 ChimerSeq STARFusion TCGA_RNA-Seq CLVS1-RAB2A CLVS1 chr8 62044419 + RAB2A chr8 61531139 + Exonic hg19 OV TCGA-04-1365-01A 16 7 5'UTR-CDS Intra-chr q12.2 q12.1 Seq+ 41430 ChimerSeq STARFusion TCGA_RNA-Seq PC-UNC93B5 PC chr11 66631245 - UNC93B5 chr11 67481408 - Exonic hg19 OV TCGA-04-1365-01A 15 9 Out-of-frame Intra-chr q13.2 q13.2 41431 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-04-1365-01A 17 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41432 ChimerSeq STARFusion TCGA_RNA-Seq ZNF846-DNMT1 ZNF846 chr19 9896614 - DNMT1 chr19 10277361 - Exonic hg19 OV TCGA-04-1365-01A 14 8 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 41433 ChimerSeq STARFusion TCGA_RNA-Seq RNF217-NKAIN2 RNF217 chr6 125366590 + NKAIN2 chr6 125112485 + Exonic hg19 OV TCGA-04-1365-01A 14 1 In-Frame Intra-chr q22.31 q22.31 Seq+ 41434 ChimerSeq STARFusion TCGA_RNA-Seq CDC42BPB-SYNJ2BP CDC42BPB chr14 103414058 - SYNJ2BP chr14 70847912 - Exonic hg19 OV TCGA-04-1365-01A 4 18 Out-of-frame Intra-chr q32.32 q24.2 Seq+ 41435 ChimerSeq STARFusion TCGA_RNA-Seq PC-UNC93B5 PC chr11 66631245 - UNC93B5 chr11 67479478 - Exonic hg19 OV TCGA-04-1365-01A 6 9 Out-of-frame Intra-chr q13.2 q13.2 41436 ChimerSeq STARFusion TCGA_RNA-Seq EHMT1-ATP13A1 EHMT1 chr9 140611634 + ATP13A1 chr19 19770796 - Exonic hg19 OV TCGA-61-1733-01A 20 1 In-Frame Inter-chr q34.3 p13.11 Seq+ 41437 ChimerSeq STARFusion TCGA_RNA-Seq PELP1-CAMTA2 PELP1 chr17 4577805 - CAMTA2 chr17 4877795 - Exonic hg19 OV TCGA-61-1733-01A 18 0 In-Frame Intra-chr p13.2 p13.2 Transcription factor Seq+ 41438 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-61-1737-01A 13 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41439 ChimerSeq STARFusion TCGA_RNA-Seq TPM3-GPR37L1 TPM3 chr1 154142876 - GPR37L1 chr1 202096869 + Exonic hg19 OV TCGA-25-2409-01A 147 32 Out-of-frame Intra-chr q21.3 q32.1 Seq+ 41440 ChimerSeq STARFusion TCGA_RNA-Seq EWSR1-KREMEN1 EWSR1 chr22 29688595 + KREMEN1 chr22 29521251 + Exonic hg19 OV TCGA-25-2409-01A 17 5 In-Frame Intra-chr q12.2 q12.1 Seq+ 41441 ChimerSeq STARFusion TCGA_RNA-Seq DDX42-ACE DDX42 chr17 61851736 + ACE chr17 61557130 + Exonic hg19 OV TCGA-25-2409-01A 14 4 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 41442 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-25-2409-01A 13 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41443 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1429-ESRP1 KIAA1429 chr8 95565613 - ESRP1 chr8 95690431 + Exonic hg19 OV TCGA-25-2409-01A 9 2 Out-of-frame Intra-chr q22.1 q22.1 Tumor suppressor gene 41444 ChimerSeq STARFusion TCGA_RNA-Seq DDX42-ACE DDX42 chr17 61852538 + ACE chr17 61557130 + Exonic hg19 OV TCGA-25-2409-01A 8 4 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 41445 ChimerSeq STARFusion TCGA_RNA-Seq IGF2-IGH@ IGF2 chr11 2152083 - IGH@ chr14 106330463 - Exonic hg19 OV TCGA-25-2042-01A 28 1 Out-of-frame Inter-chr p15.5 Oncogene 32.33 41446 ChimerSeq STARFusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2017357 - COL1A1 chr17 48264067 - Exonic hg19 OV TCGA-25-2042-01A 9 17 Out-of-frame Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 41447 ChimerSeq STARFusion TCGA_RNA-Seq ZNF622-FAM134B ZNF622 chr5 16463217 - FAM134B chr5 16477897 - Exonic hg19 OV TCGA-25-2042-01A 8 3 Out-of-frame Intra-chr p15.1 Seq+ 41448 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61665880 - ANK3 chr10 61802517 - Exonic hg19 OV TCGA-61-1914-01A 101 64 In-Frame Intra-chr q21.2 q21.2 Seq+ 41449 ChimerSeq STARFusion TCGA_RNA-Seq MAP2K4-MYH3 MAP2K4 chr17 11924318 + MYH3 chr17 10539170 - Exonic hg19 OV TCGA-61-1914-01A 72 12 In-Frame Intra-chr p12 STE:STE7 Oncogene Tumor suppressor gene p13.1 Seq+ 41450 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61665880 - ANK3 chr10 61815794 - Exonic hg19 OV TCGA-61-1914-01A 41 64 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 41451 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61665880 - ANK3 chr10 61802514 - Exonic hg19 OV TCGA-61-1914-01A 26 64 In-Frame Intra-chr q21.2 q21.2 Seq+ 41452 ChimerSeq STARFusion TCGA_RNA-Seq PKM-PARP6 PKM chr15 72511285 - PARP6 chr15 72535040 - Exonic hg19 OV TCGA-61-1914-01A 13 4 Out-of-frame Intra-chr q23 q23 41453 ChimerSeq STARFusion TCGA_RNA-Seq TMSB4X-CTSB TMSB4X chrX 12994437 + CTSB chr8 11702324 - Exonic hg19 OV TCGA-61-1914-01A 7 2 Out-of-frame Inter-chr p22.2 p23.1 41454 ChimerSeq STARFusion TCGA_RNA-Seq UBN1-SRRM2 UBN1 chr16 4897340 + SRRM2 chr16 2819933 + Exonic hg19 OV TCGA-29-1694-01A 146 9 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 41455 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-29-1694-01A 23 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41456 ChimerSeq STARFusion TCGA_RNA-Seq PTK7-RRP36 PTK7 chr6 43044305 + RRP36 chr6 42992723 + Exonic hg19 OV TCGA-29-1694-01A 20 0 In-Frame Intra-chr p21.1 p21.1 41457 ChimerSeq STARFusion TCGA_RNA-Seq HSP90AB1-CAPN11 HSP90AB1 chr6 44214932 + CAPN11 chr6 44134495 + Exonic hg19 OV TCGA-29-1694-01A 15 2 5'UTR-CDS Intra-chr p21.1 Oncogene p21.1 Seq+ 41458 ChimerSeq STARFusion TCGA_RNA-Seq PTK7-KLHDC3 PTK7 chr6 43044305 + KLHDC3 chr6 42984872 + Exonic hg19 OV TCGA-29-1694-01A 13 5 CDS-5'UTR Intra-chr p21.1 p21.1 Seq+ 41459 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-29-1694-01A 12 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41460 ChimerSeq STARFusion TCGA_RNA-Seq SWI5-DNM1 SWI5 chr9 131048312 + DNM1 chr9 130980510 + Exonic hg19 OV TCGA-29-1694-01A 11 2 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 41461 ChimerSeq STARFusion TCGA_RNA-Seq PTK7-KLHDC3 PTK7 chr6 43044305 + KLHDC3 chr6 42985257 + Exonic hg19 OV TCGA-29-1694-01A 10 5 In-Frame Intra-chr p21.1 p21.1 Seq+ 41462 ChimerSeq STARFusion TCGA_RNA-Seq EDC3-SCAMP2 EDC3 chr15 74988221 - SCAMP2 chr15 75141042 - Exonic hg19 OV TCGA-24-1846-01A 72 5 5'UTR-CDS Intra-chr q24.1 q24.1 Seq+ 41463 ChimerSeq STARFusion TCGA_RNA-Seq MPHOSPH10-ATP6V1B1 MPHOSPH10 chr2 71361927 + ATP6V1B1 chr2 71185176 + Exonic hg19 OV TCGA-24-1846-01A 20 4 In-Frame Intra-chr p13.3 p13.3 Seq+ 41464 ChimerSeq STARFusion TCGA_RNA-Seq EDC3-SCAMP2 EDC3 chr15 74988221 - SCAMP2 chr15 75140986 - Exonic hg19 OV TCGA-24-1846-01A 14 5 5'UTR-CDS Intra-chr q24.1 q24.1 Seq+ 41465 ChimerSeq STARFusion TCGA_RNA-Seq MPHOSPH10-ATP6V1B1 MPHOSPH10 chr2 71365761 + ATP6V1B1 chr2 71185176 + Exonic hg19 OV TCGA-24-1846-01A 12 4 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 41466 ChimerSeq STARFusion TCGA_RNA-Seq ITGB4-SAP30BP ITGB4 chr17 73732775 + SAP30BP chr17 73686751 + Exonic hg19 OV TCGA-24-1846-01A 10 3 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 41467 ChimerSeq STARFusion TCGA_RNA-Seq EDC3-SCAMP2 EDC3 chr15 74988221 - SCAMP2 chr15 75137934 - Exonic hg19 OV TCGA-24-1846-01A 8 5 5'UTR-CDS Intra-chr q24.1 q24.1 Seq+ 41468 ChimerSeq STARFusion TCGA_RNA-Seq PPFIBP1-SMCO2 PPFIBP1 chr12 27807747 + SMCO2 chr12 27627719 + Exonic hg19 OV TCGA-24-1846-01A 7 5 Out-of-frame Intra-chr p11.23 p11.23 41469 ChimerSeq STARFusion TCGA_RNA-Seq ERO1LB-HEATR1 ERO1LB chr1 236415350 - HEATR1 chr1 236721829 - Exonic hg19 OV TCGA-23-1023-01R 96 25 In-Frame Intra-chr q43 Seq+ 41470 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-23-1023-01R 37 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41471 ChimerSeq STARFusion TCGA_RNA-Seq SCRIB-PUF60 SCRIB chr8 144889094 - PUF60 chr8 144906569 - Exonic hg19 OV TCGA-23-1023-01R 11 30 In-Frame Intra-chr Tumor suppressor gene Seq+ 41472 ChimerSeq STARFusion TCGA_RNA-Seq SCRIB-PUF60 SCRIB chr8 144890779 - PUF60 chr8 144906569 - Exonic hg19 OV TCGA-23-1023-01R 10 30 In-Frame Intra-chr Tumor suppressor gene Seq+ 41473 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-23-1023-01R 17 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 41474 ChimerSeq STARFusion TCGA_RNA-Seq SCRIB-PUF60 SCRIB chr8 144889094 - PUF60 chr8 144906566 - Exonic hg19 OV TCGA-23-1023-01R 8 30 In-Frame Intra-chr Tumor suppressor gene Seq+ 41475 ChimerSeq STARFusion TCGA_RNA-Seq MECOM-CLDN16 MECOM chr3 169381124 - CLDN16 chr3 190088682 + Exonic hg19 OV TCGA-23-1023-01R 13 4 5'UTR-5'UTR Intra-chr q26.2 Transcription factor q28 41476 ChimerSeq STARFusion TCGA_RNA-Seq SCRIB-PUF60 SCRIB chr8 144892649 - PUF60 chr8 144906569 - Exonic hg19 OV TCGA-23-1023-01R 3 30 In-Frame Intra-chr Tumor suppressor gene Seq+ 41477 ChimerSeq STARFusion TCGA_RNA-Seq SCRIB-PUF60 SCRIB chr8 144889094 - PUF60 chr8 144909337 - Exonic hg19 OV TCGA-23-1023-01R 2 30 CDS-5'UTR Intra-chr Tumor suppressor gene Seq+ 41478 ChimerSeq STARFusion TCGA_RNA-Seq TMED5-LINC01057 TMED5 chr1 93645611 - LINC01057 chr1 95145163 - Exonic hg19 OV TCGA-23-1023-01R 6 13 Out-of-frame Intra-chr p22.1 41479 ChimerSeq STARFusion TCGA_RNA-Seq TMED5-LINC01057 TMED5 chr1 93645611 - LINC01057 chr1 95197993 - Exonic hg19 OV TCGA-23-1023-01R 5 13 Out-of-frame Intra-chr p22.1 41480 ChimerSeq STARFusion TCGA_RNA-Seq TMED5-LINC01057 TMED5 chr1 93645611 - LINC01057 chr1 95104114 - Exonic hg19 OV TCGA-23-1023-01R 5 13 Out-of-frame Intra-chr p22.1 41481 ChimerSeq STARFusion TCGA_RNA-Seq VTCN1-DNM2 VTCN1 chr1 117753446 - DNM2 chr19 10883155 + Exonic hg19 OV TCGA-23-1119-01A 21 46 Out-of-frame Inter-chr p12 p13.2 Seq+ 41482 ChimerSeq STARFusion TCGA_RNA-Seq PCBP2-C12orf10 PCBP2 chr12 53865591 + C12orf10 chr12 53700750 + Exonic hg19 OV TCGA-23-1119-01A 16 14 In-Frame Intra-chr q13.13 q13.13 41483 ChimerSeq STARFusion TCGA_RNA-Seq YWHAG-RAB11FIP1 YWHAG chr7 75988039 - RAB11FIP1 chr8 37735069 - Exonic hg19 OV TCGA-13-0908-01B 86 20 Out-of-frame Inter-chr q11.23 p11.23 Seq+ 41484 ChimerSeq STARFusion TCGA_RNA-Seq ABI2-CYP20A1 ABI2 chr2 204193354 + CYP20A1 chr2 204156985 + Exonic hg19 OV TCGA-13-0908-01B 49 13 In-Frame Intra-chr q33.2 Tumor suppressor gene q33.2 Seq+ 41485 ChimerSeq STARFusion TCGA_RNA-Seq DNMT3A-NCKAP1 DNMT3A chr2 25564695 - NCKAP1 chr2 183853914 - Exonic hg19 OV TCGA-13-0908-01B 31 33 5'UTR-CDS Intra-chr p23.3 Oncogene Tumor suppressor gene q32.1 Seq+ 41486 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-HIGD1A FRS2 chr12 69864310 + HIGD1A chr3 42835767 - Exonic hg19 OV TCGA-13-0908-01B 32 18 5'UTR-5'UTR Inter-chr q15 p22.1 41487 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-13-0908-01B 17 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 41488 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-CLEC7A ASMTL chrX 1540551 - CLEC7A chr12 10271189 - Exonic hg19 OV TCGA-13-0908-01B 15 7 In-Frame Inter-chr p22.33 p13.2 Seq+ 41489 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-HIGD1A FRS2 chr12 69864310 + HIGD1A chr3 42827654 - Exonic hg19 OV TCGA-13-0908-01B 9 18 5'UTR-CDS Inter-chr q15 p22.1 41490 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-13-0908-01B 12 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41491 ChimerSeq STARFusion TCGA_RNA-Seq ATM-ENPP2 ATM chr11 108190785 + ENPP2 chr8 120650767 - Exonic hg19 OV TCGA-13-0908-01B 10 4 Out-of-frame Inter-chr q22.3 Atypical:PIKK Oncogene Tumor suppressor gene q24.12 41492 ChimerSeq STARFusion TCGA_RNA-Seq STAG1-TBL1XR1 STAG1 chr3 136471037 - TBL1XR1 chr3 176782810 - Exonic hg19 OV TCGA-13-0908-01B 9 4 5'UTR-5'UTR Intra-chr q22.3 q26.32 Seq+ 41493 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-CLEC7A ASMTL chrY 1490551 - CLEC7A chr12 10271189 - Exonic hg19 OV TCGA-13-0908-01B 8 4 In-Frame Inter-chr p22.33 p13.2 Seq+ 41494 ChimerSeq STARFusion TCGA_RNA-Seq SSBP3-DHCR24 SSBP3 chr1 54867534 - DHCR24 chr1 55341720 - Exonic hg19 OV TCGA-24-1842-01A 183 33 In-Frame Intra-chr p32.3 p32.3 Seq+ 41495 ChimerSeq STARFusion TCGA_RNA-Seq ZNF195-FAM160A2 ZNF195 chr11 3400268 - FAM160A2 chr11 6240280 - Exonic hg19 OV TCGA-24-1842-01A 114 32 In-Frame Intra-chr p15.4 Transcription factor p15.4 Seq+ 41496 ChimerSeq STARFusion TCGA_RNA-Seq POLE2-RPS29 POLE2 chr14 50154854 - RPS29 chr14 50052767 - Exonic hg19 OV TCGA-24-1842-01A 88 14 In-Frame Intra-chr q21.3 q21.3 Seq+ 41497 ChimerSeq STARFusion TCGA_RNA-Seq MARK3-BCAS3 MARK3 chr14 103852417 + BCAS3 chr17 59445688 + Exonic hg19 OV TCGA-24-1842-01A 80 10 Out-of-frame Inter-chr q32.32 CAMK:CAMKL q23.2 Seq+ 41498 ChimerSeq STARFusion TCGA_RNA-Seq QKI-PACRG QKI chr6 163899928 + PACRG chr6 163735859 + Exonic hg19 OV TCGA-24-1842-01A 64 19 Out-of-frame Intra-chr q26 q26 Tumor suppressor gene Seq+ 41499 ChimerSeq STARFusion TCGA_RNA-Seq MECOM-LRRC31 MECOM chr3 169381124 - LRRC31 chr3 169587660 - Exonic hg19 OV TCGA-24-1842-01A 56 5 5'UTR-5'UTR Intra-chr q26.2 Transcription factor q26.2 Seq+ 41500 ChimerSeq STARFusion TCGA_RNA-Seq CRK-SMG6 CRK chr17 1359171 - SMG6 chr17 1964916 - Exonic hg19 OV TCGA-24-1842-01A 40 5 In-Frame Intra-chr p13.3 p13.3 Seq+ 41501 ChimerSeq STARFusion TCGA_RNA-Seq EXT2-TTC17 EXT2 chr11 44151688 + TTC17 chr11 43436140 + Exonic hg19 OV TCGA-24-1842-01A 38 9 In-Frame Intra-chr p11.2 Oncogene Tumor suppressor gene p12 Seq+ 41502 ChimerSeq STARFusion TCGA_RNA-Seq QKI-PACRG QKI chr6 163899928 + PACRG chr6 163733811 + Exonic hg19 OV TCGA-24-1842-01A 24 19 Out-of-frame Intra-chr q26 q26 Tumor suppressor gene Seq+ 41503 ChimerSeq STARFusion TCGA_RNA-Seq MYBBP1A-CAMTA2 MYBBP1A chr17 4451819 - CAMTA2 chr17 4886338 - Exonic hg19 OV TCGA-24-1842-01A 27 5 Out-of-frame Intra-chr p13.2 Tumor suppressor gene p13.2 Transcription factor Seq+ 41504 ChimerSeq STARFusion TCGA_RNA-Seq ZNF195-FAM160A2 ZNF195 chr11 3400268 - FAM160A2 chr11 6239993 - Exonic hg19 OV TCGA-24-1842-01A 16 32 Out-of-frame Intra-chr p15.4 Transcription factor p15.4 Seq+ 41505 ChimerSeq STARFusion TCGA_RNA-Seq MED13-APOH MED13 chr17 60087911 - APOH chr17 64252645 - Exonic hg19 OV TCGA-24-1842-01A 22 7 CDS-5'UTR Intra-chr q23.2 q24.2 41506 ChimerSeq STARFusion TCGA_RNA-Seq LAMC2-RABGAP1L LAMC2 chr1 183205739 + RABGAP1L chr1 174606513 + Exonic hg19 OV TCGA-24-1842-01A 21 3 In-Frame Intra-chr q25.3 q25.1 Seq+ 41507 ChimerSeq STARFusion TCGA_RNA-Seq PEX6-MBD3L1 PEX6 chr6 42933419 - MBD3L1 chr19 8951588 + Exonic hg19 OV TCGA-24-1842-01A 14 3 CDS-5'UTR Inter-chr p21.1 p13.2 Seq+ 41508 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821632 - Exonic hg19 OV TCGA-24-1842-01A 13 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41509 ChimerSeq STARFusion TCGA_RNA-Seq PEPD-ZNF829 PEPD chr19 34003499 - ZNF829 chr19 37383373 - Exonic hg19 OV TCGA-24-1842-01A 11 5 Out-of-frame Intra-chr q13.11 q13.12 Transcription factor Seq+ 41510 ChimerSeq STARFusion TCGA_RNA-Seq CAPZA1-CTTNBP2NL CAPZA1 chr1 113202401 + CTTNBP2NL chr1 112991564 + Exonic hg19 OV TCGA-24-1842-01A 12 0 In-Frame Intra-chr p13.2 p13.2 Seq+ 41511 ChimerSeq STARFusion TCGA_RNA-Seq CTPS1-AGO1 CTPS1 chr1 41445501 + AGO1 chr1 36354028 + Exonic hg19 OV TCGA-24-1842-01A 12 0 Out-of-frame Intra-chr p34.2 p34.3 41512 ChimerSeq STARFusion TCGA_RNA-Seq WWOX-NUDT7 WWOX chr16 78149051 + NUDT7 chr16 77775479 + Exonic hg19 OV TCGA-24-1842-01A 11 2 In-Frame Intra-chr q23.1 Tumor suppressor gene q23.1 Seq+ 41513 ChimerSeq STARFusion TCGA_RNA-Seq NRBF2-EYA2 NRBF2 chr10 64893260 + EYA2 chr20 45771698 + Exonic hg19 OV TCGA-24-1842-01A 9 3 In-Frame Inter-chr q21.3 q13.12 41514 ChimerSeq STARFusion TCGA_RNA-Seq MKL2-RBFOX1 MKL2 chr16 14234617 + RBFOX1 chr16 7568149 + Exonic hg19 OV TCGA-24-1842-01A 8 3 Out-of-frame Intra-chr p13.12 p13.3 Seq+ 41515 ChimerSeq STARFusion TCGA_RNA-Seq TAF15-AP2B1 TAF15 chr17 34165557 + AP2B1 chr17 34050644 + Exonic hg19 OV TCGA-24-1842-01A 7 7 Out-of-frame Intra-chr q12 q12 Seq+ 41516 ChimerSeq STARFusion TCGA_RNA-Seq GAB2-TENM4 GAB2 chr11 77991647 - TENM4 chr11 78614568 - Exonic hg19 OV TCGA-24-1842-01A 6 5 Out-of-frame Intra-chr q14.1 q14.1 41517 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525073 - IGHG1 chr14 106209411 - Exonic hg19 OV TCGA-61-1741-01A 112 0 Out-of-frame Inter-chr q34 Oncogene q32.33 41518 ChimerSeq STARFusion TCGA_RNA-Seq ROMO1-NFS1 ROMO1 chr20 34287685 + NFS1 chr20 34269903 - Exonic hg19 OV TCGA-61-1741-01A 56 6 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 41519 ChimerSeq STARFusion TCGA_RNA-Seq USF2-LEPREL1 USF2 chr19 35762044 + LEPREL1 chr3 189713231 - Exonic hg19 OV TCGA-61-1741-01A 14 2 Out-of-frame Inter-chr q13.12 Transcription factor Seq+ 41520 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821632 - Exonic hg19 OV TCGA-61-1741-01A 10 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41521 ChimerSeq STARFusion TCGA_RNA-Seq UQCC1-MMP24 UQCC1 chr20 33894469 - MMP24 chr20 33834643 + Exonic hg19 OV TCGA-61-1741-01A 8 3 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 41522 ChimerSeq STARFusion TCGA_RNA-Seq RPL13P12-PNMA2 RPL13P12 chr17 17286669 - PNMA2 chr8 26364477 - Exonic hg19 OV TCGA-24-2038-01A 17 0 Out-of-frame Inter-chr p21.2 41523 ChimerSeq STARFusion TCGA_RNA-Seq USP7-CARHSP1 USP7 chr16 9057064 - CARHSP1 chr16 8953192 - Exonic hg19 OV TCGA-24-1843-01A 135 7 CDS-5'UTR Intra-chr p13.2 p13.2 41524 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-RCC1 CCDC6 chr10 61665880 - RCC1 chr1 28856370 + Exonic hg19 OV TCGA-24-1843-01A 71 3 CDS-5'UTR Inter-chr q21.2 p35.3 Seq+ 41525 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R2A-BNIP3L PPP2R2A chr8 26151256 + BNIP3L chr8 26265516 + Exonic hg19 OV TCGA-24-1843-01A 42 2 Out-of-frame Intra-chr p21.2 p21.2 Tumor suppressor gene Seq+ 41526 ChimerSeq STARFusion TCGA_RNA-Seq UBE2D2-PSD2 UBE2D2 chr5 138980020 + PSD2 chr5 139188976 + Exonic hg19 OV TCGA-24-1843-01A 19 2 CDS-5'UTR Intra-chr q31.2 q31.2 Seq+ 41527 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-C10orf40 CCDC6 chr10 61665880 - C10orf40 chr10 61719726 - Exonic hg19 OV TCGA-24-1843-01A 19 1 CDS-3'UTR Intra-chr q21.2 41528 ChimerSeq STARFusion TCGA_RNA-Seq PDE4D-DEPDC1B PDE4D chr5 59783769 - DEPDC1B chr5 59943360 - Exonic hg19 OV TCGA-24-1843-01A 15 0 5'UTR-CDS Intra-chr q12.1 q12.1 Seq+ 41529 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT4-PARK2 AGPAT4 chr6 161694970 - PARK2 chr6 161990448 - Exonic hg19 OV TCGA-24-1843-01A 12 3 5'UTR-CDS Intra-chr q26 Tumor suppressor gene 41530 ChimerSeq STARFusion TCGA_RNA-Seq CHD2-ST8SIA2 CHD2 chr15 93444529 + ST8SIA2 chr15 93007330 + Exonic hg19 OV TCGA-24-1843-01A 12 1 In-Frame Intra-chr q26.1 q26.1 41531 ChimerSeq STARFusion TCGA_RNA-Seq KIF2A-IPO11 KIF2A chr5 61602363 + IPO11 chr5 61762958 + Exonic hg19 OV TCGA-24-1843-01A 12 1 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 41532 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-TRIM29 UVRAG chr11 75572825 + TRIM29 chr11 119983184 - Exonic hg19 OV TCGA-23-1030-01A 531 178 In-Frame Intra-chr q13.5 Tumor suppressor gene q23.3 Seq+ 41533 ChimerSeq STARFusion TCGA_RNA-Seq MROH1-XRCC5 MROH1 chr8 145255444 + XRCC5 chr2 217054948 + Exonic hg19 OV TCGA-23-1030-01A 91 20 Out-of-frame Inter-chr q24.3 q35 Tumor suppressor gene Seq+ 41534 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-SLC43A2 YWHAE chr17 1303341 - SLC43A2 chr17 1496573 - Exonic hg19 OV TCGA-23-1030-01A 55 11 Out-of-frame Intra-chr p13.3 Seq+ 41535 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-SEZ6 FAM222B chr17 27093604 - SEZ6 chr17 27309057 - Exonic hg19 OV TCGA-23-1030-01A 51 12 In-Frame Intra-chr q11.2 q11.2 Seq+ 41536 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-23-1030-01A 38 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41537 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069803 - Exonic hg19 OV TCGA-23-1030-01A 33 0 Out-of-frame Inter-chr q12.3 q32.2 41538 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-23-1030-01A 31 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41539 ChimerSeq STARFusion TCGA_RNA-Seq NCOA3-EYA2 NCOA3 chr20 46130763 + EYA2 chr20 45801355 + Exonic hg19 OV TCGA-23-1030-01A 21 17 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.12 Seq+ 41540 ChimerSeq STARFusion TCGA_RNA-Seq CCND3-C6orf132 CCND3 chr6 42016239 - C6orf132 chr6 42078029 - Exonic hg19 OV TCGA-23-1030-01A 21 1 5'UTR-CDS Intra-chr p21.1 p21.1 Seq+ 41541 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-23-1030-01A 21 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 41542 ChimerSeq STARFusion TCGA_RNA-Seq HELZ2-GMEB2 HELZ2 chr20 62197437 - GMEB2 chr20 62221782 - Exonic hg19 OV TCGA-23-1030-01A 19 8 Out-of-frame Intra-chr q13.33 q13.33 Transcription factor Seq+ 41543 ChimerSeq STARFusion TCGA_RNA-Seq LRP6-HEBP1 LRP6 chr12 12301876 - HEBP1 chr12 13128413 - Exonic hg19 OV TCGA-23-1030-01A 17 5 In-Frame Intra-chr p13.1 Seq+ 41544 ChimerSeq STARFusion TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5410006 - RNF216 chr7 5692141 - Exonic hg19 OV TCGA-23-1030-01A 17 5 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 41545 ChimerSeq STARFusion TCGA_RNA-Seq RBFOX2-CACNG2 RBFOX2 chr22 36334895 - CACNG2 chr22 36983595 - Exonic hg19 OV TCGA-23-1030-01A 17 3 Out-of-frame Intra-chr q12.3 Seq+ 41546 ChimerSeq STARFusion TCGA_RNA-Seq HMGN1-LCA5L HMGN1 chr21 40720218 - LCA5L chr21 40801137 - Exonic hg19 OV TCGA-23-1030-01A 11 6 CDS-5'UTR Intra-chr q22.2 q22.2 41547 ChimerSeq STARFusion TCGA_RNA-Seq ITGB4-RECQL5 ITGB4 chr17 73727028 + RECQL5 chr17 73626566 - Exonic hg19 OV TCGA-23-1030-01A 11 5 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 41548 ChimerSeq STARFusion TCGA_RNA-Seq HMGN1-LCA5L HMGN1 chr21 40720218 - LCA5L chr21 40807499 - Exonic hg19 OV TCGA-23-1030-01A 6 6 CDS-5'UTR Intra-chr q22.2 q22.2 41549 ChimerSeq STARFusion TCGA_RNA-Seq HMGN1-LCA5L HMGN1 chr21 40720218 - LCA5L chr21 40795416 - Exonic hg19 OV TCGA-23-1030-01A 5 4 Out-of-frame Intra-chr q22.2 q22.2 41550 ChimerSeq STARFusion TCGA_RNA-Seq HMGN1-LCA5L HMGN1 chr21 40720218 - LCA5L chr21 40810644 - Exonic hg19 OV TCGA-23-1030-01A 2 6 CDS-5'UTR Intra-chr q22.2 q22.2 41551 ChimerSeq STARFusion TCGA_RNA-Seq PACS2-MTA1 PACS2 chr14 105814917 + MTA1 chr14 105936178 + Exonic hg19 OV TCGA-24-1419-01A 45 11 In-Frame Intra-chr q32.33 q32.33 Seq+ 41552 ChimerSeq STARFusion TCGA_RNA-Seq SCAF8-TIAM2 SCAF8 chr6 155099179 + TIAM2 chr6 155411423 + Exonic hg19 OV TCGA-24-1419-01A 10 6 CDS-5'UTR Intra-chr q25.2 q25.2 41553 ChimerSeq STARFusion TCGA_RNA-Seq GORASP2-GAD1 GORASP2 chr2 171804940 + GAD1 chr2 171704186 + Exonic hg19 OV TCGA-61-2009-01A 108 8 In-Frame Intra-chr q31.1 q31.1 Seq+ 41554 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-61-2009-01A 22 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41555 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-61-2009-01A 16 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 41556 ChimerSeq STARFusion TCGA_RNA-Seq GORASP2-GAD1 GORASP2 chr2 171804940 + GAD1 chr2 171705796 + Exonic hg19 OV TCGA-61-2009-01A 13 8 In-Frame Intra-chr q31.1 q31.1 Seq+ 41557 ChimerSeq STARFusion TCGA_RNA-Seq ERI2-CRYM ERI2 chr16 20907630 - CRYM chr16 21255389 - Exonic hg19 OV TCGA-09-0369-01A 32 29 Out-of-frame Intra-chr p12.3 Seq+ 41558 ChimerSeq STARFusion TCGA_RNA-Seq PPP4R2-AHRR PPP4R2 chr3 73047309 + AHRR chr5 422844 + Exonic hg19 OV TCGA-09-0369-01A 31 3 Out-of-frame Inter-chr p13 p15.33 Tumor suppressor gene Transcription factor Seq+ 41559 ChimerSeq STARFusion TCGA_RNA-Seq GXYLT2-AHRR GXYLT2 chr3 73047309 + AHRR chr5 422844 + Exonic hg19 OV TCGA-09-0369-01A 29 3 3'UTR-CDS Inter-chr p13 p15.33 Tumor suppressor gene Transcription factor 41560 ChimerSeq STARFusion TCGA_RNA-Seq PTPRS-RGS6 PTPRS chr19 5286061 - RGS6 chr14 72818803 + Exonic hg19 OV TCGA-09-0369-01A 21 4 Out-of-frame Inter-chr p13.3 q24.2 Seq+ 41561 ChimerSeq STARFusion TCGA_RNA-Seq TRA2B-DDX11L1 TRA2B chr3 185655613 - DDX11L1 chr1 12010 + Exonic hg19 OV TCGA-09-0369-01A 20 2 CDS-3'UTR Inter-chr q27.2 p36.33 41562 ChimerSeq STARFusion TCGA_RNA-Seq RNF138-VWC2 RNF138 chr18 29672198 + VWC2 chr7 49842307 + Exonic hg19 OV TCGA-09-0369-01A 16 7 5'UTR-CDS Inter-chr q12.1 p12.2 Seq+ 41563 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469662 + FTH1P27 chrX 37364954 + Exonic hg19 OV TCGA-09-0369-01A 16 0 Out-of-frame Inter-chr q13.33 p21.1 41564 ChimerSeq STARFusion TCGA_RNA-Seq ERI2-CRYM ERI2 chr16 20911526 - CRYM chr16 21255389 - Exonic hg19 OV TCGA-09-0369-01A 8 29 Out-of-frame Intra-chr p12.3 Seq+ 41565 ChimerSeq STARFusion TCGA_RNA-Seq DCUN1D3-CRYM DCUN1D3 chr16 20907630 - CRYM chr16 21255389 - Exonic hg19 OV TCGA-09-0369-01A 11 14 Out-of-frame Intra-chr p12.3 Tumor suppressor gene Seq+ 41566 ChimerSeq STARFusion TCGA_RNA-Seq DCUN1D3-CRYM DCUN1D3 chr16 20911526 - CRYM chr16 21255389 - Exonic hg19 OV TCGA-09-0369-01A 8 14 5'UTR-3'UTR Intra-chr p12.3 Tumor suppressor gene Seq+ 41567 ChimerSeq STARFusion TCGA_RNA-Seq EIF2A-ANKUB1 EIF2A chr3 150270212 + ANKUB1 chr3 149479400 - Exonic hg19 OV TCGA-24-2290-01A 76 19 In-Frame Intra-chr q25.1 q25.1 Seq+ 41568 ChimerSeq STARFusion TCGA_RNA-Seq FNIP1-ACSL6 FNIP1 chr5 131132523 - ACSL6 chr5 131154556 - Exonic hg19 OV TCGA-24-2290-01A 61 7 CDS-3'UTR Intra-chr q31.1 q31.1 Seq+ 41569 ChimerSeq STARFusion TCGA_RNA-Seq GANAB-SSRP1 GANAB chr11 62414034 - SSRP1 chr11 57102714 - Exonic hg19 OV TCGA-24-2290-01A 49 0 CDS-5'UTR Intra-chr q12.3 Tumor suppressor gene q12.1 Seq+ 41570 ChimerSeq STARFusion TCGA_RNA-Seq NUP160-AGBL2 NUP160 chr11 47869400 - AGBL2 chr11 47726280 - Exonic hg19 OV TCGA-24-2290-01A 13 5 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 41571 ChimerSeq STARFusion TCGA_RNA-Seq NUP160-AGBL2 NUP160 chr11 47869400 - AGBL2 chr11 47727469 - Exonic hg19 OV TCGA-24-2290-01A 8 5 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 41572 ChimerSeq STARFusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2017353 - COL1A1 chr17 48264063 - Exonic hg19 OV TCGA-24-2290-01A 5 13 Out-of-frame Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 41573 ChimerSeq STARFusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2017362 - COL1A1 chr17 48264070 - Exonic hg19 OV TCGA-24-2290-01A 3 12 Out-of-frame Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 41574 ChimerSeq STARFusion TCGA_RNA-Seq TOP2A-STAU1 TOP2A chr17 38560404 - STAU1 chr20 47752468 - Exonic hg19 OV TCGA-61-2008-02A 49 10 In-Frame Inter-chr q21.2 q13.13 Seq+ 41575 ChimerSeq STARFusion TCGA_RNA-Seq TOMM20-ARID4B TOMM20 chr1 235291910 - ARID4B chr1 235295312 - Exonic hg19 OV TCGA-61-2008-02A 29 2 CDS-3'UTR Intra-chr q42.3 q42.3 41576 ChimerSeq STARFusion TCGA_RNA-Seq TOMM20-RBM34 TOMM20 chr1 235291910 - RBM34 chr1 235295312 - Exonic hg19 OV TCGA-61-2008-02A 29 2 Out-of-frame Intra-chr q42.3 q42.3 Seq+ 41577 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069803 - Exonic hg19 OV TCGA-61-2008-02A 29 0 Out-of-frame Inter-chr q12.3 q32.2 41578 ChimerSeq STARFusion TCGA_RNA-Seq C6orf106-KIF6 C6orf106 chr6 34664223 - KIF6 chr6 39398937 - Exonic hg19 OV TCGA-61-2008-02A 13 3 Out-of-frame Intra-chr p21.31 p21.2 Seq+ 41579 ChimerSeq STARFusion TCGA_RNA-Seq RBMS1-IGH@ RBMS1 chr2 161157162 - IGH@ chr14 107283096 - Exonic hg19 OV TCGA-61-2008-02A 12 5 Out-of-frame Inter-chr q24.2 32.33 41580 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-61-2008-02A 12 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41581 ChimerSeq STARFusion TCGA_RNA-Seq PARL-KLHL6 PARL chr3 183602510 - KLHL6 chr3 183245798 - Exonic hg19 OV TCGA-61-2008-02A 9 3 In-Frame Intra-chr q27.1 q27.1 41582 ChimerSeq STARFusion TCGA_RNA-Seq ATF4-MIEF1 ATF4 chr22 39918473 + MIEF1 chr22 39907293 + Exonic hg19 OV TCGA-61-2008-02A 9 0 Out-of-frame Intra-chr q13.1 Transcription factor q13.1 41583 ChimerSeq STARFusion TCGA_RNA-Seq RANBP10-KARS RANBP10 chr16 67839331 - KARS chr16 75675621 - Exonic hg19 OV TCGA-61-2008-02A 8 2 In-Frame Intra-chr q22.1 q23.1 41584 ChimerSeq STARFusion TCGA_RNA-Seq CDKAL1-E2F3 CDKAL1 chr6 20548936 + E2F3 chr6 20480077 + Exonic hg19 OV TCGA-61-2008-02A 6 0 Out-of-frame Intra-chr p22.3 p22.3 Tumor suppressor gene Transcription factor Seq+ 41585 ChimerSeq STARFusion TCGA_RNA-Seq RBMS1-IGH@ RBMS1 chr2 161157162 - IGH@ chr14 107083557 - Exonic hg19 OV TCGA-61-2008-02A 4 5 Out-of-frame Inter-chr q24.2 32.33 41586 ChimerSeq STARFusion TCGA_RNA-Seq RPL13P12-PNMA2 RPL13P12 chr17 17286669 - PNMA2 chr8 26364477 - Exonic hg19 OV TCGA-23-1024-01A 73 0 Out-of-frame Inter-chr p21.2 41587 ChimerSeq STARFusion TCGA_RNA-Seq TMEM61-PHLDA3 TMEM61 chr1 55446753 + PHLDA3 chr1 201435306 - Exonic hg19 OV TCGA-23-1024-01A 39 15 CDS-3'UTR Intra-chr p32.3 q32.1 Tumor suppressor gene Seq+ 41588 ChimerSeq STARFusion TCGA_RNA-Seq KLK8-NLRP4 KLK8 chr19 51504354 - NLRP4 chr19 56388362 + Exonic hg19 OV TCGA-23-1024-01A 36 22 Out-of-frame Intra-chr q13.41 q13.43 Seq+ 41589 ChimerSeq STARFusion TCGA_RNA-Seq KLK9-NLRP4 KLK9 chr19 51504354 - NLRP4 chr19 56388362 + Exonic hg19 OV TCGA-23-1024-01A 36 22 3'UTR-CDS Intra-chr q13.41 q13.43 41590 ChimerSeq STARFusion TCGA_RNA-Seq KLK9-NLRP4 KLK9 chr19 51504354 - NLRP4 chr19 56388362 + Exonic hg19 OV TCGA-23-1024-01A 36 22 3'UTR-CDS Intra-chr q13.41 q13.43 41591 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-CDC25A MAP4 chr3 48019355 - CDC25A chr3 48226185 - Exonic hg19 OV TCGA-23-1024-01A 35 9 In-Frame Intra-chr p21.31 p21.31 Seq+ 41592 ChimerSeq STARFusion TCGA_RNA-Seq SCAP-SMARCC1 SCAP chr3 47476498 - SMARCC1 chr3 47680270 - Exonic hg19 OV TCGA-23-1024-01A 22 14 Out-of-frame Intra-chr p21.31 p21.31 Tumor suppressor gene Seq+ 41593 ChimerSeq STARFusion TCGA_RNA-Seq HCCAT3-STRN4 HCCAT3 chr19 52452488 + STRN4 chr19 47242145 - Exonic hg19 OV TCGA-23-1024-01A 19 15 Out-of-frame Intra-chr q13.32 41594 ChimerSeq STARFusion TCGA_RNA-Seq ZNF350-SLC12A5 ZNF350 chr19 52477599 - SLC12A5 chr20 44669012 + Exonic hg19 OV TCGA-23-1024-01A 13 20 In-Frame Inter-chr q13.41 Transcription factor q13.12 Seq+ 41595 ChimerSeq STARFusion TCGA_RNA-Seq CCZ1-FAM86LP CCZ1 chr7 5938550 + FAM86LP chr7 6971412 - Exonic hg19 OV TCGA-23-1024-01A 10 17 Out-of-frame Intra-chr p22.1 p22.1 41596 ChimerSeq STARFusion TCGA_RNA-Seq FNBP1L-GCNT3 FNBP1L chr1 93965140 + GCNT3 chr15 59901934 + Exonic hg19 OV TCGA-23-1024-01A 9 9 CDS-5'UTR Inter-chr p22.1 q22.2 41597 ChimerSeq STARFusion TCGA_RNA-Seq RHOA-ARCN1 RHOA chr3 49449253 - ARCN1 chr11 118451961 + Exonic hg19 OV TCGA-23-1024-01A 9 5 5'UTR-CDS Inter-chr p21.31 Oncogene Tumor suppressor gene q23.3 Seq+ 41598 ChimerSeq STARFusion TCGA_RNA-Seq KLK8-NLRP4 KLK8 chr19 51501007 - NLRP4 chr19 56388362 + Exonic hg19 OV TCGA-23-1024-01A 4 22 Out-of-frame Intra-chr q13.41 q13.43 Seq+ 41599 ChimerSeq STARFusion TCGA_RNA-Seq KLK9-NLRP4 KLK9 chr19 51501007 - NLRP4 chr19 56388362 + Exonic hg19 OV TCGA-23-1024-01A 4 22 3'UTR-CDS Intra-chr q13.41 q13.43 41600 ChimerSeq STARFusion TCGA_RNA-Seq HCCAT3-STRN4 HCCAT3 chr19 52452488 + STRN4 chr19 47234130 - Exonic hg19 OV TCGA-23-1024-01A 2 15 Out-of-frame Intra-chr q13.32 41601 ChimerSeq STARFusion TCGA_RNA-Seq SF3B2-TRMT112 SF3B2 chr11 65819988 + TRMT112 chr11 64085144 - Exonic hg19 OV TCGA-25-1627-01A 339 6 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 41602 ChimerSeq STARFusion TCGA_RNA-Seq SF3B2-TRMT112 SF3B2 chr11 65819988 + TRMT112 chr11 64084837 - Exonic hg19 OV TCGA-25-1627-01A 149 6 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 41603 ChimerSeq STARFusion TCGA_RNA-Seq TNRC18-RADIL TNRC18 chr7 5391450 - RADIL chr7 4876236 - Exonic hg19 OV TCGA-25-1627-01A 118 4 In-Frame Intra-chr p22.1 p22.1 Seq+ 41604 ChimerSeq STARFusion TCGA_RNA-Seq CLPB-MRPL21 CLPB chr11 72012847 - MRPL21 chr11 68665480 - Exonic hg19 OV TCGA-25-1627-01A 28 4 Out-of-frame Intra-chr q13.4 q13.3 Seq+ 41605 ChimerSeq STARFusion TCGA_RNA-Seq SDC4-TP53TG5 SDC4 chr20 43976965 - TP53TG5 chr20 44006253 - Exonic hg19 OV TCGA-25-1627-01A 26 2 In-Frame Intra-chr q13.12 q13.12 Seq+ 41606 ChimerSeq STARFusion TCGA_RNA-Seq CBWD2-PSD4 CBWD2 chr2 114212355 + PSD4 chr2 113939923 + Exonic hg19 OV TCGA-25-1627-01A 18 2 CDS-5'UTR Intra-chr q14.1 q14.1 Seq+ 41607 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF17-CLPB ARHGEF17 chr11 73022875 + CLPB chr11 72028264 - Exonic hg19 OV TCGA-25-1627-01A 11 0 In-Frame Intra-chr q13.4 q13.4 Seq+ 41608 ChimerSeq STARFusion TCGA_RNA-Seq EPS15-TTC39A EPS15 chr1 51912632 - TTC39A chr1 51787497 - Exonic hg19 OV TCGA-25-1623-01A 132 61 In-Frame Intra-chr p32.3 p32.3 Seq+ 41609 ChimerSeq STARFusion TCGA_RNA-Seq DNASE2-MAST1 DNASE2 chr19 12991616 - MAST1 chr19 12984423 + Exonic hg19 OV TCGA-25-1623-01A 32 12 In-Frame Intra-chr p13.13 p13.13 AGC:MAST Seq+ 41610 ChimerSeq STARFusion TCGA_RNA-Seq EPS15-TTC39A EPS15 chr1 51912632 - TTC39A chr1 51808750 - Exonic hg19 OV TCGA-25-1623-01A 18 61 CDS-5'UTR Intra-chr p32.3 p32.3 Seq+ 41611 ChimerSeq STARFusion TCGA_RNA-Seq MMP7-IGL@ MMP7 chr11 102401343 - IGL@ chr22 22735206 + Exonic hg19 OV TCGA-25-1623-01A 12 4 Out-of-frame Inter-chr q22.2 q11.22 41612 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CCDC85C FTH1 chr11 61734943 - CCDC85C chr14 100069803 - Exonic hg19 OV TCGA-25-1623-01A 12 0 Out-of-frame Inter-chr q12.3 q32.2 41613 ChimerSeq STARFusion TCGA_RNA-Seq MED24-TMED10 MED24 chr17 38209551 - TMED10 chr14 75602589 - Exonic hg19 OV TCGA-61-2092-01A 123 38 In-Frame Inter-chr q21.1 q24.3 Seq+ 41614 ChimerSeq STARFusion TCGA_RNA-Seq RC3H2-NRF1 RC3H2 chr9 125655188 - NRF1 chr7 129269919 + Exonic hg19 OV TCGA-61-2092-01A 95 21 CDS-5'UTR Inter-chr q33.2 q32.2 Tumor suppressor gene Transcription factor Seq+ 41615 ChimerSeq STARFusion TCGA_RNA-Seq DCAF5-NOXRED1 DCAF5 chr14 69529101 - NOXRED1 chr14 77861148 - Exonic hg19 OV TCGA-61-2092-01A 66 27 Out-of-frame Intra-chr q24.1 q24.3 Seq+ 41616 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-61-2092-01A 24 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41617 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-SBNO2 DNM2 chr19 10870487 + SBNO2 chr19 1149441 - Exonic hg19 OV TCGA-61-2092-01A 17 2 Out-of-frame Intra-chr p13.2 p13.3 Seq+ 41618 ChimerSeq STARFusion TCGA_RNA-Seq NDUFA13-NCAN NDUFA13 chr19 19637069 + NCAN chr19 19337295 + Exonic hg19 OV TCGA-61-2092-01A 16 3 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 41619 ChimerSeq STARFusion TCGA_RNA-Seq YJEFN3-NCAN YJEFN3 chr19 19637069 + NCAN chr19 19337295 + Exonic hg19 OV TCGA-61-2092-01A 16 3 5'UTR-CDS Intra-chr p13.11 p13.11 41620 ChimerSeq STARFusion TCGA_RNA-Seq NBPF1-SDC3 NBPF1 chr1 16939833 - SDC3 chr1 31351587 - Exonic hg19 OV TCGA-61-2092-01A 16 0 5'UTR-CDS Intra-chr p36.13 p35.2 41621 ChimerSeq STARFusion TCGA_RNA-Seq RBMS2-ERBB3 RBMS2 chr12 56915873 + ERBB3 chr12 56477535 + Exonic hg19 OV TCGA-61-2092-01A 13 5 Out-of-frame Intra-chr q13.3 q13.2 Oncogene Seq+ 41622 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-61-2092-01A 14 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 41623 ChimerSeq STARFusion TCGA_RNA-Seq CYTH3-ATP8B3 CYTH3 chr7 6312105 - ATP8B3 chr19 1802644 - Exonic hg19 OV TCGA-61-2092-01A 12 2 In-Frame Inter-chr p22.1 p13.3 Seq+ 41624 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734942 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-61-2092-01A 11 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41625 ChimerSeq STARFusion TCGA_RNA-Seq ERC2-ARHGEF3 ERC2 chr3 56502276 - ARHGEF3 chr3 56992917 - Exonic hg19 OV TCGA-61-2092-01A 9 2 5'UTR-CDS Intra-chr p14.3 p14.3 Seq+ 41626 ChimerSeq STARFusion TCGA_RNA-Seq TP53BP2-GRHL2 TP53BP2 chr1 224001942 - GRHL2 chr8 102631767 + Exonic hg19 OV TCGA-61-2092-01A 9 2 Out-of-frame Inter-chr q41 Tumor suppressor gene q22.3 Transcription factor Seq+ 41627 ChimerSeq STARFusion TCGA_RNA-Seq RBFOX2-TEX33 RBFOX2 chr22 36205827 - TEX33 chr22 37400066 - Exonic hg19 OV TCGA-61-2092-01A 9 1 CDS-5'UTR Intra-chr q12.3 Seq+ 41628 ChimerSeq STARFusion TCGA_RNA-Seq CLPX-PARP16 CLPX chr15 65440886 - PARP16 chr15 65551735 - Exonic hg19 OV TCGA-61-2092-01A 7 1 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 41629 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-IKZF3 FBXL20 chr17 37499433 - IKZF3 chr17 37944627 - Exonic hg19 OV TCGA-61-2092-01A 7 1 Out-of-frame Intra-chr q12 q21.1 Tumor suppressor gene Transcription factor Seq+ 41630 ChimerSeq STARFusion TCGA_RNA-Seq P4HB-ARHGDIA P4HB chr17 79817913 - ARHGDIA chr17 79825990 - Exonic hg19 OV TCGA-13-1497-01A 110 139 Out-of-frame Intra-chr q25.3 q25.3 41631 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734947 - ZFHX3 chr16 72821629 - Exonic hg19 OV TCGA-13-1497-01A 44 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41632 ChimerSeq STARFusion TCGA_RNA-Seq LONRF1-TRDC LONRF1 chr8 12598383 - TRDC chr14 22931924 + Exonic hg19 OV TCGA-13-1497-01A 23 11 Out-of-frame Inter-chr p23.1 q11.2 Seq+ 41633 ChimerSeq STARFusion TCGA_RNA-Seq PARD3-MTA1 PARD3 chr10 34985246 - MTA1 chr14 105929830 + Exonic hg19 OV TCGA-13-1497-01A 16 12 In-Frame Inter-chr p11.21 q32.33 Seq+ 41634 ChimerSeq STARFusion TCGA_RNA-Seq SP3-NDUFB3 SP3 chr2 174819601 - NDUFB3 chr2 201943604 + Exonic hg19 OV TCGA-13-1497-01A 16 12 CDS-5'UTR Intra-chr q31.1 Transcription factor q33.1 Seq+ 41635 ChimerSeq STARFusion TCGA_RNA-Seq FAF2-METTL2A FAF2 chr5 175875471 + METTL2A chr17 60522198 + Exonic hg19 OV TCGA-13-1497-01A 11 25 Out-of-frame Inter-chr q35.2 q23.2 Seq+ 41636 ChimerSeq STARFusion TCGA_RNA-Seq RAB33B-SEC24D RAB33B chr4 140375598 + SEC24D chr4 119666215 - Exonic hg19 OV TCGA-13-1497-01A 15 6 In-Frame Intra-chr q31.1 q26 Seq+ 41637 ChimerSeq STARFusion TCGA_RNA-Seq METTL2A-FAF2 METTL2A chr17 60501671 + FAF2 chr5 175906189 + Exonic hg19 OV TCGA-13-1497-01A 14 6 Out-of-frame Inter-chr q23.2 q35.2 41638 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734940 - CXXC4 chr4 105412493 - Exonic hg19 OV TCGA-13-1497-01A 14 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 41639 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734940 - ZFHX3 chr16 72821628 - Exonic hg19 OV TCGA-13-1497-01A 11 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41640 ChimerSeq STARFusion TCGA_RNA-Seq PRKAG2-NUB1 PRKAG2 chr7 151329155 - NUB1 chr7 151042434 + Exonic hg19 OV TCGA-13-1497-01A 9 7 In-Frame Intra-chr q36.1 q36.1 Seq+ 41641 ChimerSeq STARFusion TCGA_RNA-Seq DCAF6-LETM1 DCAF6 chr1 167906246 + LETM1 chr4 1850936 - Exonic hg19 OV TCGA-13-1497-01A 9 5 In-Frame Inter-chr q24.2 p16.3 Seq+ 41642 ChimerSeq STARFusion TCGA_RNA-Seq FAF2-METTL2A FAF2 chr5 175875471 + METTL2A chr17 60525062 + Exonic hg19 OV TCGA-13-1497-01A 2 25 Out-of-frame Inter-chr q35.2 q23.2 Seq+ 41643 ChimerSeq STARFusion TCGA_RNA-Seq SUCO-DNM3 SUCO chr1 172539870 + DNM3 chr1 172348158 + Exonic hg19 OV TCGA-13-1497-01A 6 6 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 41644 ChimerSeq STARFusion TCGA_RNA-Seq SYNCRIP-SEMA3A SYNCRIP chr6 86346685 - SEMA3A chr7 83739905 - Exonic hg19 OV TCGA-13-1497-01A 4 12 In-Frame Inter-chr q14.3 q21.11 Seq+ 41645 ChimerSeq STARFusion TCGA_RNA-Seq POM121C-ZP3 POM121C chr7 75070232 - ZP3 chr7 76063355 + Exonic hg19 OV TCGA-13-1497-01A 2 19 In-Frame Intra-chr q11.23 q11.23 41646 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-MMP7 TMEM123 chr11 102319543 - MMP7 chr11 102395795 - Exonic hg19 OV TCGA-04-1348-01A 773 180 In-Frame Intra-chr q22.2 q22.2 Seq+ 41647 ChimerSeq STARFusion TCGA_RNA-Seq LDLR-LRPAP1 LDLR chr19 11200291 + LRPAP1 chr4 3514763 - Exonic hg19 OV TCGA-04-1348-01A 171 33 Out-of-frame Inter-chr p13.2 p16.3 Seq+ 41648 ChimerSeq STARFusion TCGA_RNA-Seq URI1-VSTM2B URI1 chr19 30477324 + VSTM2B chr19 30054753 + Exonic hg19 OV TCGA-04-1348-01A 99 29 In-Frame Intra-chr q12 q12 41649 ChimerSeq STARFusion TCGA_RNA-Seq DEPDC5-OSBP2 DEPDC5 chr22 32164849 + OSBP2 chr22 31301824 + Exonic hg19 OV TCGA-04-1348-01A 84 19 In-Frame Intra-chr q12.2 q12.2 Seq+ 41650 ChimerSeq STARFusion TCGA_RNA-Seq PHF12-MYO18A PHF12 chr17 27254009 - MYO18A chr17 27449271 - Exonic hg19 OV TCGA-04-1348-01A 48 6 In-Frame Intra-chr q11.2 q11.2 Oncogene Seq+ 41651 ChimerSeq STARFusion TCGA_RNA-Seq FBLN2-LMCD1 FBLN2 chr3 13590708 + LMCD1 chr3 8574423 + Exonic hg19 OV TCGA-04-1348-01A 45 10 5'UTR-CDS Intra-chr p25.1 p25.3 Seq+ 41652 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB38-ACPL2 ZBTB38 chr3 141165026 + ACPL2 chr3 140991608 + Exonic hg19 OV TCGA-04-1348-01A 35 11 Out-of-frame Intra-chr q23 Transcription factor Seq+ 41653 ChimerSeq STARFusion TCGA_RNA-Seq RYBP-ARL13B RYBP chr3 72495647 - ARL13B chr3 93714718 + Exonic hg19 OV TCGA-04-1348-01A 31 12 In-Frame Intra-chr q11.1 Seq+ 41654 ChimerSeq STARFusion TCGA_RNA-Seq CTC1-STX8 CTC1 chr17 8151322 - STX8 chr17 9153962 - Exonic hg19 OV TCGA-04-1348-01A 28 0 Out-of-frame Intra-chr p13.1 p13.1 41655 ChimerSeq STARFusion TCGA_RNA-Seq CBWD1-PSD4 CBWD1 chr9 146102 - PSD4 chr2 113966557 + Exonic hg19 OV TCGA-04-1348-01A 21 6 CDS-3'UTR Inter-chr p24.3 q14.1 Seq+ 41656 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-CXXC4 FTH1 chr11 61734945 - CXXC4 chr4 105412498 - Exonic hg19 OV TCGA-04-1348-01A 18 0 Out-of-frame Inter-chr q12.3 q24 Tumor suppressor gene Transcription factor 41657 ChimerSeq STARFusion TCGA_RNA-Seq RAB11B-HAUS3 RAB11B chr19 8467449 + HAUS3 chr4 2240770 - Exonic hg19 OV TCGA-04-1348-01A 16 4 Out-of-frame Inter-chr p13.2 p16.3 Seq+ 41658 ChimerSeq STARFusion TCGA_RNA-Seq CBWD2-IL37 CBWD2 chr2 114222750 + IL37 chr2 113674706 + Exonic hg19 OV TCGA-04-1348-01A 15 4 Out-of-frame Intra-chr q14.1 q14.1 41659 ChimerSeq STARFusion TCGA_RNA-Seq UBE2H-TMEM209 UBE2H chr7 129497351 - TMEM209 chr7 129846821 - Exonic hg19 OV TCGA-04-1348-01A 14 7 CDS-5'UTR Intra-chr q32.2 q32.2 41660 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-ZFHX3 FTH1 chr11 61734948 - ZFHX3 chr16 72821630 - Exonic hg19 OV TCGA-04-1348-01A 15 0 Out-of-frame Inter-chr q12.3 q22.3 Tumor suppressor gene Transcription factor 41661 ChimerSeq STARFusion TCGA_RNA-Seq CLEC16A-HCCAT5 CLEC16A chr16 11154879 + HCCAT5 chr16 73126980 + Exonic hg19 OV TCGA-04-1348-01A 13 2 Out-of-frame Intra-chr p13.13 q22.3 41662 ChimerSeq STARFusion TCGA_RNA-Seq NEAT1-FRMD8 NEAT1 chr11 65212146 + FRMD8 chr11 65167208 + Exonic hg19 OV TCGA-04-1348-01A 13 2 Out-of-frame Intra-chr q13.1 q13.1 41663 ChimerSeq STARFusion TCGA_RNA-Seq UBE2H-TMEM209 UBE2H chr7 129497351 - TMEM209 chr7 129843950 - Exonic hg19 OV TCGA-04-1348-01A 12 5 Out-of-frame Intra-chr q32.2 q32.2 41664 ChimerSeq STARFusion TCGA_RNA-Seq INO80D-GPR1 INO80D chr2 206950625 - GPR1 chr2 207041999 - Exonic hg19 OV TCGA-04-1348-01A 11 5 5'UTR-5'UTR Intra-chr 41665 ChimerSeq STARFusion TCGA_RNA-Seq ZNF7-PPIE ZNF7 chr8 146062892 + PPIE chr1 40205837 + Exonic hg19 OV TCGA-25-1633-01A 27 7 In-Frame Inter-chr q24.3 Transcription factor p34.2 Seq+ 41666 ChimerSeq STARFusion TCGA_RNA-Seq VTCN1-AGBL4 VTCN1 chr1 117753446 - AGBL4 chr1 50163109 - Exonic hg19 OV TCGA-25-1633-01A 16 15 Out-of-frame Intra-chr p12 p33 Seq+ 41667 ChimerSeq STARFusion TCGA_RNA-Seq INPP5B-TRIT1 INPP5B chr1 38351310 - TRIT1 chr1 40313332 - Exonic hg19 OV TCGA-25-1633-01A 14 4 In-Frame Intra-chr p34.3 p34.2 Tumor suppressor gene Seq+ 41668 ChimerSeq STARFusion TCGA_RNA-Seq RIPK1-SERPINB9 RIPK1 chr6 3064293 + SERPINB9 chr6 2900855 - Exonic hg19 OV TCGA-25-1633-01A 10 0 5'UTR-5'UTR Intra-chr p25.2 TKL:RIPK p25.2 41669 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P1-KLK6 PRSS3P1 chr7 142471340 + KLK6 chr19 51462572 - Exonic hg19 PAAD TCGA-3E-AAAY 161 1 Out-of-frame Inter-chr q13.41 Tumor suppressor gene 41670 ChimerSeq STARFusion TCGA_RNA-Seq UBE2G2-ABCG1 UBE2G2 chr21 46207835 - ABCG1 chr21 43704670 + Exonic hg19 PAAD TCGA-3E-AAAY 12 45 In-Frame Intra-chr q22.3 q22.3 Seq+ 41671 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P1-KLK6 PRSS3P1 chr7 142481912 + KLK6 chr19 51462572 - Exonic hg19 PAAD TCGA-3E-AAAY 22 1 Out-of-frame Inter-chr q13.41 Tumor suppressor gene 41672 ChimerSeq STARFusion TCGA_RNA-Seq WRB-ERG WRB chr21 40752412 + ERG chr21 39817544 - Exonic hg19 PAAD TCGA-3E-AAAY 5 15 In-Frame Intra-chr q22.2 q22.2 Oncogene Transcription factor Seq+ 41673 ChimerSeq STARFusion TCGA_RNA-Seq WRB-ERG WRB chr21 40752412 + ERG chr21 39795483 - Exonic hg19 PAAD TCGA-3E-AAAY 2 15 Out-of-frame Intra-chr q22.2 q22.2 Oncogene Transcription factor Seq+ 41674 ChimerSeq STARFusion TCGA_RNA-Seq GOLPH3L-HORMAD1 GOLPH3L chr1 150667132 - HORMAD1 chr1 150675869 - Exonic hg19 PAAD TCGA-IB-7652 12 74 In-Frame Intra-chr q21.3 q21.3 Seq+ 41675 ChimerSeq STARFusion TCGA_RNA-Seq PDSS2-CCDC178 PDSS2 chr6 107655402 - CCDC178 chr18 30554645 - Exonic hg19 PAAD TCGA-IB-7652 3 26 Out-of-frame Inter-chr q21 Tumor suppressor gene q12.1 Seq+ 41676 ChimerSeq STARFusion TCGA_RNA-Seq PDSS2-CCDC178 PDSS2 chr6 107655402 - CCDC178 chr18 30518055 - Exonic hg19 PAAD TCGA-IB-7652 2 26 Out-of-frame Inter-chr q21 Tumor suppressor gene q12.1 Seq+ 41677 ChimerSeq STARFusion TCGA_RNA-Seq DENND4C-ANP32B DENND4C chr9 19230831 + ANP32B chr9 100773553 + Exonic hg19 PAAD TCGA-IB-7890 6 34 5'UTR-CDS Intra-chr p22.1 q22.33 Seq+ 41678 ChimerSeq STARFusion TCGA_RNA-Seq ARID1A-WDTC1 ARID1A chr1 27102198 + WDTC1 chr1 27608730 + Exonic hg19 PAAD TCGA-IB-7893 13 71 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 Seq+ 41679 ChimerSeq STARFusion TCGA_RNA-Seq COL1A2-MBNL1 COL1A2 chr7 94027071 + MBNL1 chr3 151987554 + Exonic hg19 PAAD TCGA-IB-7893 10 1 Out-of-frame Inter-chr q21.3 q25.1 41680 ChimerSeq STARFusion TCGA_RNA-Seq RBM3-COL1A1 RBM3 chrX 48434090 + COL1A1 chr17 48264909 - Exonic hg19 PAAD TCGA-IB-7893 10 1 Out-of-frame Inter-chr p11.23 q21.33 Oncogene 41681 ChimerSeq STARFusion TCGA_RNA-Seq CRYL1-GJB6 CRYL1 chr13 21063509 - GJB6 chr13 20797634 - Exonic hg19 PAAD TCGA-HZ-7289 19 48 CDS-5'UTR Intra-chr q12.11 q12.11 Seq+ 41682 ChimerSeq STARFusion TCGA_RNA-Seq ATE1-NSMCE4A ATE1 chr10 123658356 - NSMCE4A chr10 123721032 - Exonic hg19 PAAD TCGA-FB-A4P5 3 10 Out-of-frame Intra-chr q26.13 q26.13 Seq+ 41683 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-TSNARE1 PVT1 chr8 128806980 + TSNARE1 chr8 143310940 - Exonic hg19 PAAD TCGA-FB-AAQ6 3 2 5'UTR-CDS Intra-chr q24.21 q24.3 41684 ChimerSeq STARFusion TCGA_RNA-Seq VAPA-METTL4 VAPA chr18 9914332 + METTL4 chr18 2547528 - Exonic hg19 PAAD TCGA-FB-AAQ0 2 5 Out-of-frame Intra-chr p11.22 p11.32 Seq+ 41685 ChimerSeq STARFusion TCGA_RNA-Seq LINC00472-DDX11L1 LINC00472 chr6 72126113 - DDX11L1 chr1 12010 + Exonic hg19 PAAD TCGA-FB-AAQ1 4 11 Out-of-frame Inter-chr q13 p36.33 41686 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL1A-ZNF521 OSBPL1A chr18 21805006 - ZNF521 chr18 22642705 - Exonic hg19 PAAD TCGA-HV-AA8X 11 30 Out-of-frame Intra-chr q11.2 q11.2 Oncogene Transcription factor Seq+ 41687 ChimerSeq STARFusion TCGA_RNA-Seq PTH2R-CCNYL1 PTH2R chr2 209703135 + CCNYL1 chr2 208589524 + Exonic hg19 PAAD TCGA-HZ-7919 2 5 3'UTR-CDS Intra-chr q34 q33.3 41688 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPC-LINC00645 HNRNPC chr14 21731470 - LINC00645 chr14 28103450 + Exonic hg19 PAAD TCGA-FB-AAPQ 3 12 Out-of-frame Intra-chr q11.2 q12 41689 ChimerSeq STARFusion TCGA_RNA-Seq EML4-NTRK3 EML4 chr2 42491871 + NTRK3 chr15 88576276 - Exonic hg19 PAAD TCGA-FB-AAPP 4 26 In-Frame Inter-chr p21 Oncogene q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 41690 ChimerSeq STARFusion TCGA_RNA-Seq MTAP-HIST1H2BH MTAP chr9 21818201 + HIST1H2BH chr6 26251892 + Exonic hg19 PAAD TCGA-FB-AAPP 3 4 Out-of-frame Inter-chr p21.3 Tumor suppressor gene p22.2 41691 ChimerSeq STARFusion TCGA_RNA-Seq TBCD-FOXK2 TBCD chr17 80714091 + FOXK2 chr17 80544939 + Exonic hg19 PAAD TCGA-RB-A7B8 6 8 In-Frame Intra-chr q25.3 Transcription factor Seq+ 41692 ChimerSeq STARFusion TCGA_RNA-Seq IFNGR2-NUDCD3 IFNGR2 chr21 34805178 + NUDCD3 chr7 44444182 - Exonic hg19 PAAD TCGA-L1-A7W4 98 227 In-Frame Inter-chr p13 Seq+ 41693 ChimerSeq STARFusion TCGA_RNA-Seq PAK4-B9D1 PAK4 chr19 39616559 + B9D1 chr17 19251193 - Exonic hg19 PAAD TCGA-L1-A7W4 22 83 5'UTR-CDS Inter-chr q13.2 STE:STE20 p11.2 Seq+ 41694 ChimerSeq STARFusion TCGA_RNA-Seq SPINT2-ZNF260 SPINT2 chr19 38755638 + ZNF260 chr19 37006601 - Exonic hg19 PAAD TCGA-L1-A7W4 11 27 CDS-5'UTR Intra-chr q13.2 Tumor suppressor gene q13.12 Transcription factor Seq+ 41695 ChimerSeq STARFusion TCGA_RNA-Seq GUCD1-TMEM211 GUCD1 chr22 24951583 - TMEM211 chr22 25335519 - Exonic hg19 PAAD TCGA-L1-A7W4 4 40 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 41696 ChimerSeq STARFusion TCGA_RNA-Seq NUDCD3-IFNGR2 NUDCD3 chr7 44465499 - IFNGR2 chr21 34809135 + Exonic hg19 PAAD TCGA-L1-A7W4 3 26 Out-of-frame Inter-chr p13 Seq+ 41697 ChimerSeq STARFusion TCGA_RNA-Seq FAXC-ASCC3 FAXC chr6 99790774 - ASCC3 chr6 100960794 - Exonic hg19 PAAD TCGA-L1-A7W4 3 13 In-Frame Intra-chr q16.2 q16.3 Seq+ 41698 ChimerSeq STARFusion TCGA_RNA-Seq SH3BP4-LANCL1 SH3BP4 chr2 235904020 + LANCL1 chr2 211341136 - Exonic hg19 PAAD TCGA-L1-A7W4 2 10 5'UTR-5'UTR Intra-chr q37.2 q34 Seq+ 41699 ChimerSeq STARFusion TCGA_RNA-Seq ORAI2-SLC47A2 ORAI2 chr7 102079628 + SLC47A2 chr17 19584983 - Exonic hg19 PAAD TCGA-FB-AAPZ 7 17 In-Frame Inter-chr q22.1 p11.2 Seq+ 41700 ChimerSeq STARFusion TCGA_RNA-Seq COPS7B-PTMA COPS7B chr2 232646593 + PTMA chr2 232576058 + Exonic hg19 PAAD TCGA-FB-AAPZ 3 12 5'UTR-CDS Intra-chr q37.1 q37.1 Seq+ 41701 ChimerSeq STARFusion TCGA_RNA-Seq GPR35-ANKMY1 GPR35 chr2 241558448 + ANKMY1 chr2 241468926 - Exonic hg19 PAAD TCGA-FB-AAPZ 2 3 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 41702 ChimerSeq STARFusion TCGA_RNA-Seq LAMA5-CABLES2 LAMA5 chr20 60926760 - CABLES2 chr20 60971648 - Exonic hg19 PAAD TCGA-IB-7644 70 130 In-Frame Intra-chr q13.33 q13.33 Seq+ 41703 ChimerSeq STARFusion TCGA_RNA-Seq GMDS-VAPB GMDS chr6 1930337 - VAPB chr20 57019133 + Exonic hg19 PAAD TCGA-IB-7647 121 310 In-Frame Inter-chr p25.3 q13.32 Seq+ 41704 ChimerSeq STARFusion TCGA_RNA-Seq GMDS-VAPB GMDS chr6 1960101 - VAPB chr20 57019133 + Exonic hg19 PAAD TCGA-IB-7647 22 310 In-Frame Inter-chr p25.3 q13.32 Seq+ 41705 ChimerSeq STARFusion TCGA_RNA-Seq AKAP13-GOLGA6L3 AKAP13 chr15 86129054 + GOLGA6L3 chr15 85785451 + Exonic hg19 PAAD TCGA-IB-7647 9 16 Out-of-frame Intra-chr q25.3 q25.3 41706 ChimerSeq STARFusion TCGA_RNA-Seq C22orf39-IGHGP C22orf39 chr22 19344505 - IGHGP chr14 106136183 - Exonic hg19 PAAD TCGA-IB-7647 11 1 Out-of-frame Inter-chr q11.21 41707 ChimerSeq STARFusion TCGA_RNA-Seq B3GNT4-BCL7A B3GNT4 chr12 122688348 + BCL7A chr12 122468606 + Exonic hg19 PAAD TCGA-IB-7647 2 9 5'UTR-CDS Intra-chr q24.31 Seq+ 41708 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP5-L2HGDH ARHGAP5 chr14 32563592 + L2HGDH chr14 50760964 - Exonic hg19 PAAD TCGA-IB-7646 4 12 In-Frame Intra-chr q12 q21.3 Seq+ 41709 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 PAAD TCGA-IB-7887 35 25 In-Frame Intra-chr p13.3 p13.3 41710 ChimerSeq STARFusion TCGA_RNA-Seq PPIL2-IGL@ PPIL2 chr22 22048953 + IGL@ chr22 23243156 + Exonic hg19 PAAD TCGA-IB-7885 69 1 Out-of-frame Intra-chr q11.21 q11.22 41711 ChimerSeq STARFusion TCGA_RNA-Seq PPIL2-IGLC2 PPIL2 chr22 22048953 + IGLC2 chr22 23243156 + Exonic hg19 PAAD TCGA-IB-7885 69 1 Out-of-frame Intra-chr q11.21 q11.22 41712 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGH@ INTS1 chr7 1511981 - IGH@ chr14 106136184 - Exonic hg19 PAAD TCGA-IB-7885 31 1 Out-of-frame Inter-chr p22.3 32.33 41713 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGH@ INTS1 chr7 1511981 - IGH@ chr14 106209410 - Exonic hg19 PAAD TCGA-IB-7885 28 1 Out-of-frame Inter-chr p22.3 32.33 41714 ChimerSeq STARFusion TCGA_RNA-Seq PPIL2-IGL@ PPIL2 chr22 22048954 + IGL@ chr22 23261708 + Exonic hg19 PAAD TCGA-IB-7885 28 1 Out-of-frame Intra-chr q11.21 q11.22 41715 ChimerSeq STARFusion TCGA_RNA-Seq PPIL2-IGL@ PPIL2 chr22 22048953 + IGL@ chr22 23248512 + Exonic hg19 PAAD TCGA-IB-7885 18 1 Out-of-frame Intra-chr q11.21 q11.22 41716 ChimerSeq STARFusion TCGA_RNA-Seq CXCL16-IGH@ CXCL16 chr17 4642366 - IGH@ chr14 106330467 - Exonic hg19 PAAD TCGA-IB-7885 17 3 Out-of-frame Inter-chr p13.2 32.33 41717 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGH@ INTS1 chr7 1511981 - IGH@ chr14 106092405 - Exonic hg19 PAAD TCGA-IB-7885 13 1 Out-of-frame Inter-chr p22.3 32.33 41718 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGH@ INTS1 chr7 1511981 - IGH@ chr14 106237745 - Exonic hg19 PAAD TCGA-IB-7885 11 1 Out-of-frame Inter-chr p22.3 32.33 41719 ChimerSeq STARFusion TCGA_RNA-Seq RPL23AP79-RPS5 RPL23AP79 chr19 59086955 + RPS5 chr19 58904343 + Exonic hg19 PAAD TCGA-IB-7885 4 25 Out-of-frame Intra-chr q13.43 41720 ChimerSeq STARFusion TCGA_RNA-Seq CXCL16-IGH@ CXCL16 chr17 4642366 - IGH@ chr14 106330066 - Exonic hg19 PAAD TCGA-IB-7885 8 3 Out-of-frame Inter-chr p13.2 32.33 41721 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P1-KLK6 PRSS3P1 chr7 142471340 + KLK6 chr19 51462572 - Exonic hg19 PAAD TCGA-LB-A8F3 728 1 Out-of-frame Inter-chr q13.41 Tumor suppressor gene 41722 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P1-KLK6 PRSS3P1 chr7 142481912 + KLK6 chr19 51462572 - Exonic hg19 PAAD TCGA-LB-A8F3 186 1 Out-of-frame Inter-chr q13.41 Tumor suppressor gene 41723 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P2-CFB PRSS3P2 chr7 142481912 + CFB chr6 31919331 + Exonic hg19 PAAD TCGA-LB-A8F3 12 1 5'UTR-CDS Inter-chr 41724 ChimerSeq STARFusion TCGA_RNA-Seq STK11-AZU1 STK11 chr19 1207202 + AZU1 chr19 828230 + Exonic hg19 PAAD TCGA-RL-AAAS 4 3 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 41725 ChimerSeq STARFusion TCGA_RNA-Seq LTBP4-SPTBN4 LTBP4 chr19 41112949 + SPTBN4 chr19 41066089 + Exonic hg19 PAAD TCGA-RB-AA9M 3 5 Out-of-frame Intra-chr q13.2 q13.2 41726 ChimerSeq STARFusion TCGA_RNA-Seq AKT2-NSMAF AKT2 chr19 40741797 - NSMAF chr8 59508218 - Exonic hg19 PAAD TCGA-RB-AA9M 2 7 Out-of-frame Inter-chr q13.2 AGC:Akt Oncogene q12.1 Seq+ 41727 ChimerSeq STARFusion TCGA_RNA-Seq KLK6-PRSS3P2 KLK6 chr19 51465000 - PRSS3P2 chr7 142471642 + Exonic hg19 PAAD TCGA-3A-A9IX 8 2 CDS-5'UTR Inter-chr q13.41 Tumor suppressor gene 41728 ChimerSeq STARFusion TCGA_RNA-Seq DSTN-PLK1S1 DSTN chr20 17581690 + PLK1S1 chr20 21209649 + Exonic hg19 PAAD TCGA-2L-AAQE 16 32 Out-of-frame Intra-chr p12.1 Seq+ 41729 ChimerSeq STARFusion TCGA_RNA-Seq CACNG4-VMP1 CACNG4 chr17 64961247 + VMP1 chr17 57851115 + Exonic hg19 PAAD TCGA-2L-AAQE 10 39 Out-of-frame Intra-chr q24.2 q23.1 Seq+ 41730 ChimerSeq STARFusion TCGA_RNA-Seq CACNG4-VMP1 CACNG4 chr17 64961247 + VMP1 chr17 57886157 + Exonic hg19 PAAD TCGA-2L-AAQE 2 38 Out-of-frame Intra-chr q24.2 q23.1 Seq+ 41731 ChimerSeq STARFusion TCGA_RNA-Seq UNC13B-FAM201A UNC13B chr9 35259047 + FAM201A chr9 38621829 + Exonic hg19 PAAD TCGA-2L-AAQE 3 12 CDS-5'UTR Intra-chr p13.3 p13.1 Seq+ 41732 ChimerSeq STARFusion TCGA_RNA-Seq NME2-TEX14 NME2 chr17 49247410 + TEX14 chr17 56729363 - Exonic hg19 PAAD TCGA-2L-AAQE 2 9 CDS-5'UTR Intra-chr q21.33 Transcription factor q22 Seq+ 41733 ChimerSeq STARFusion TCGA_RNA-Seq SOCS7-PLXDC1 SOCS7 chr17 36533668 + PLXDC1 chr17 37265644 - Exonic hg19 PAAD TCGA-2L-AAQE 2 8 Out-of-frame Intra-chr q12 q12 Seq+ 41734 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P1-KLK5 PRSS3P1 chr7 142471340 + KLK5 chr19 51447042 - Exonic hg19 PAAD TCGA-3A-A9IU 7 0 Out-of-frame Inter-chr q13.41 41735 ChimerSeq STARFusion TCGA_RNA-Seq TUSC2-RASSF1 TUSC2 chr3 50365385 - RASSF1 chr3 50369585 - Exonic hg19 PAAD TCGA-2L-AAQI 6 19 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene Seq+ 41736 ChimerSeq STARFusion TCGA_RNA-Seq CD55-C4BPA CD55 chr1 207512762 + C4BPA chr1 207317889 + Exonic hg19 PAAD TCGA-IB-7654 83 436 Out-of-frame Intra-chr q32.2 q32.2 Seq+ 41737 ChimerSeq STARFusion TCGA_RNA-Seq CD55-C4BPA CD55 chr1 207513853 + C4BPA chr1 207317889 + Exonic hg19 PAAD TCGA-IB-7654 10 424 Out-of-frame Intra-chr q32.2 q32.2 Seq+ 41738 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-SSH3 PPP6R3 chr11 68287119 + SSH3 chr11 67074309 + Exonic hg19 PAAD TCGA-IB-7654 21 61 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 41739 ChimerSeq STARFusion TCGA_RNA-Seq CTRB2-CELA3A CTRB2 chr16 75240000 - CELA3A chr1 22331940 + Exonic hg19 PAAD TCGA-IB-7654 3 51 In-Frame Inter-chr q23.1 p36.12 41740 ChimerSeq STARFusion TCGA_RNA-Seq CATSPERB-ATXN3 CATSPERB chr14 92159470 - ATXN3 chr14 92563182 - Exonic hg19 PAAD TCGA-IB-7654 7 19 In-Frame Intra-chr q32.12 Seq+ 41741 ChimerSeq STARFusion TCGA_RNA-Seq RNF214-SIDT2 RNF214 chr11 117117664 + SIDT2 chr11 117060882 + Exonic hg19 PAAD TCGA-IB-7654 5 23 In-Frame Intra-chr q23.3 q23.3 Seq+ 41742 ChimerSeq STARFusion TCGA_RNA-Seq FAM8A1-CAP2 FAM8A1 chr6 17601352 + CAP2 chr6 17541204 + Exonic hg19 PAAD TCGA-IB-7654 3 19 In-Frame Intra-chr p22.3 p22.3 Seq+ 41743 ChimerSeq STARFusion TCGA_RNA-Seq SLAIN1-LINC00348 SLAIN1 chr13 78272674 + LINC00348 chr13 71741502 + Exonic hg19 PAAD TCGA-2L-AAQL 6 10 Out-of-frame Intra-chr q22.3 q21.33 41744 ChimerSeq STARFusion TCGA_RNA-Seq SERPINA1-TTR SERPINA1 chr14 94845802 - TTR chr18 29172933 + Exonic hg19 PAAD TCGA-3A-A9IO 3 36 Out-of-frame Inter-chr q32.13 q12.1 41745 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPLL-GCG HNRNPLL chr2 38829647 - GCG chr2 163000679 - Exonic hg19 PAAD TCGA-3A-A9IO 6 1 Out-of-frame Intra-chr p22.1 q24.2 41746 ChimerSeq STARFusion TCGA_RNA-Seq CHGA-SERPINA1 CHGA chr14 93393963 + SERPINA1 chr14 94844977 - Exonic hg19 PAAD TCGA-3A-A9IO 2 12 Out-of-frame Intra-chr q32.12 q32.13 41747 ChimerSeq STARFusion TCGA_RNA-Seq SEPN1-TMEM59 SEPN1 chr1 26139283 + TMEM59 chr1 54506510 - Exonic hg19 PAAD TCGA-3A-A9IH 38 101 In-Frame Intra-chr p32.3 Seq+ 41748 ChimerSeq STARFusion TCGA_RNA-Seq SEPN1-TMEM59 SEPN1 chr1 26139283 + TMEM59 chr1 54506513 - Exonic hg19 PAAD TCGA-3A-A9IH 18 99 Out-of-frame Intra-chr p32.3 Seq+ 41749 ChimerSeq STARFusion TCGA_RNA-Seq NF2-ZMAT5 NF2 chr22 30074312 + ZMAT5 chr22 30138469 - Exonic hg19 PAAD TCGA-3A-A9IH 3 5 Out-of-frame Intra-chr q12.2 Oncogene Tumor suppressor gene q12.2 Seq+ 41750 ChimerSeq STARFusion TCGA_RNA-Seq SST-NSG1 SST chr3 187386782 - NSG1 chr4 4387790 + Exonic hg19 PAAD TCGA-3A-A9IJ 5 1 Out-of-frame Inter-chr q27.3 41751 ChimerSeq STARFusion TCGA_RNA-Seq LRP6-PTPRO LRP6 chr12 12332744 - PTPRO chr12 15733631 + Exonic hg19 PAAD TCGA-F2-6879 11 62 In-Frame Intra-chr p12.3 Seq+ 41752 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-SDK2 SLC39A11 chr17 71080947 - SDK2 chr17 71364732 - Exonic hg19 PAAD TCGA-F2-6879 7 22 In-Frame Intra-chr q25.1 q25.1 Seq+ 41753 ChimerSeq STARFusion TCGA_RNA-Seq TANK-MARCH7 TANK chr2 162061304 + 2019_ 3_ 7_ chr2 160623795 + Exonic hg19 PAAD TCGA-F2-6879 2 14 Out-of-frame Intra-chr q24.2 Tumor suppressor gene q24.2 Seq+ 41754 ChimerSeq STARFusion TCGA_RNA-Seq ROBO2-LINC00877 ROBO2 chr3 75986753 + LINC00877 chr3 72085671 - Exonic hg19 PAAD TCGA-3A-A9IB 2 52 Out-of-frame Intra-chr p12.3 p13 41755 ChimerSeq STARFusion TCGA_RNA-Seq ROBO2-LINC00877 ROBO2 chr3 75986753 + LINC00877 chr3 72110245 - Exonic hg19 PAAD TCGA-3A-A9IB 2 52 Out-of-frame Intra-chr p12.3 p13 41756 ChimerSeq STARFusion TCGA_RNA-Seq FBXW7-SH3D19 FBXW7 chr4 153249360 - SH3D19 chr4 152147238 - Exonic hg19 PAAD TCGA-H8-A6C1 10 27 CDS-5'UTR Intra-chr q31.3 Oncogene Tumor suppressor gene q31.3 Seq+ 41757 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57737949 + VMP1 chr17 57851115 + Exonic hg19 PAAD TCGA-H8-A6C1 2 6 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 41758 ChimerSeq STARFusion TCGA_RNA-Seq RNF8-HIST1H2AC RNF8 chr6 37328350 + HIST1H2AC chr6 26138282 + Exonic hg19 PAAD TCGA-XN-A8T5 2 21 CDS-3'UTR Intra-chr p21.2 Tumor suppressor gene p22.2 Seq+ 41759 ChimerSeq STARFusion TCGA_RNA-Seq DDX39B-ETV7 DDX39B chr6 31503144 - ETV7 chr6 36353446 - Exonic hg19 PAAD TCGA-XN-A8T5 4 12 In-Frame Intra-chr p21.31 Transcription factor Seq+ 41760 ChimerSeq STARFusion TCGA_RNA-Seq TDP2-DCDC2 TDP2 chr6 24653211 - DCDC2 chr6 24302272 - Exonic hg19 PAAD TCGA-HZ-A77P 9 22 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 41761 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD1-MRPL15 PCMTD1 chr8 52811490 - MRPL15 chr8 55049071 + Exonic hg19 PAAD TCGA-HZ-A77P 6 7 5'UTR-CDS Intra-chr q11.23 q11.23 Seq+ 41762 ChimerSeq STARFusion TCGA_RNA-Seq IKBKB-ANK1 IKBKB chr8 42129723 + ANK1 chr8 41591587 - Exonic hg19 PAAD TCGA-HZ-A77P 4 11 In-Frame Intra-chr p11.21 Oncogene p11.21 Seq+ 41763 ChimerSeq STARFusion TCGA_RNA-Seq SS18-NPC1 SS18 chr18 23658040 - NPC1 chr18 21086606 - Exonic hg19 PAAD TCGA-XN-A8T3 8 20 CDS-3'UTR Intra-chr q11.2 q11.2 Seq+ 41764 ChimerSeq STARFusion TCGA_RNA-Seq UHRF1BP1-DAXX UHRF1BP1 chr6 34827348 + DAXX chr6 33291807 - Exonic hg19 PAAD TCGA-XN-A8T3 5 6 CDS-5'UTR Intra-chr p21.31 Oncogene Seq+ 41765 ChimerSeq STARFusion TCGA_RNA-Seq CELA3A-CTRB2 CELA3A chr1 22334008 + CTRB2 chr16 75238220 - Exonic hg19 PAAD TCGA-HZ-A77O 2 23 In-Frame Inter-chr p36.12 q23.1 41766 ChimerSeq STARFusion TCGA_RNA-Seq CELA3A-CTRB2 CELA3A chr1 22334008 + CTRB2 chr16 75238220 - Exonic hg19 PAAD TCGA-3A-A9I9 2 36 In-Frame Inter-chr p36.12 q23.1 41767 ChimerSeq STARFusion TCGA_RNA-Seq STYK1-GPR162 STYK1 chr12 10774475 - GPR162 chr12 6934649 + Exonic hg19 PAAD TCGA-3A-A9I9 6 11 Out-of-frame Intra-chr p13.2 p13.31 Seq+ 41768 ChimerSeq STARFusion TCGA_RNA-Seq LASP1-RBX1 LASP1 chr17 37046757 + RBX1 chr22 41349559 + Exonic hg19 PAAD TCGA-FB-AAQ3 4 2 In-Frame Inter-chr q12 q13.2 Seq+ 41769 ChimerSeq STARFusion TCGA_RNA-Seq LASP1-XPNPEP3 LASP1 chr17 37046757 + XPNPEP3 chr22 41349559 + Exonic hg19 PAAD TCGA-FB-AAQ3 4 2 CDS-3'UTR Inter-chr q12 q13.2 41770 ChimerSeq STARFusion TCGA_RNA-Seq ATP1B1-NRG1 ATP1B1 chr1 169080736 + NRG1 chr8 32453346 + Exonic hg19 PAAD TCGA-3A-A9I5 34 78 In-Frame Inter-chr q24.2 p12 KB Pub Seq+ 41771 ChimerSeq STARFusion TCGA_RNA-Seq SERPINA1-IGH@ SERPINA1 chr14 94844888 - IGH@ chr14 106208441 - Exonic hg19 PAAD TCGA-3A-A9I5 7 1 Out-of-frame Intra-chr q32.13 32.33 41772 ChimerSeq STARFusion TCGA_RNA-Seq SERPINA1-IGHG1 SERPINA1 chr14 94844888 - IGHG1 chr14 106208441 - Exonic hg19 PAAD TCGA-3A-A9I5 7 1 Out-of-frame Intra-chr q32.13 q32.33 41773 ChimerSeq STARFusion TCGA_RNA-Seq HADH-ZP2 HADH chr4 108911220 + ZP2 chr16 21214572 - Exonic hg19 PAAD TCGA-HZ-7925 8 9 In-Frame Inter-chr q25 Seq+ 41774 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 PAAD TCGA-HZ-7923 13 5 In-Frame Intra-chr p13.3 p13.3 41775 ChimerSeq STARFusion TCGA_RNA-Seq CERS5-MYRFL CERS5 chr12 50560884 - MYRFL chr12 70249060 + Exonic hg19 PAAD TCGA-HZ-7922 2 5 Out-of-frame Intra-chr q13.12 q15 Transcription factor Seq+ 41776 ChimerSeq STARFusion TCGA_RNA-Seq EIF3C-NUPR1 EIF3C chr16 28723108 + NUPR1 chr16 28549476 - Exonic hg19 PAAD TCGA-FB-A5VM 2 5 Out-of-frame Intra-chr p11.2 p11.2 Tumor suppressor gene 41777 ChimerSeq STARFusion TCGA_RNA-Seq CREB3-TMEM8B CREB3 chr9 35733482 + TMEM8B chr9 35845972 + Exonic hg19 PAAD TCGA-IB-A5ST 58 164 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 41778 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ANXA2 IGH@ chr14 106552287 - ANXA2 chr15 60678662 - Exonic hg19 PAAD TCGA-IB-A5ST 8 2 Out-of-frame Inter-chr 32.33 q22.2 41779 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 PAAD TCGA-IB-A5ST 5 3 In-Frame Intra-chr p13.3 p13.3 41780 ChimerSeq STARFusion TCGA_RNA-Seq DAPK2-FAM96A DAPK2 chr15 64332369 - FAM96A chr15 64367736 - Exonic hg19 PAAD TCGA-IB-A5ST 4 3 Out-of-frame Intra-chr q22.31 CAMK:DAPK Tumor suppressor gene q22.31 Seq+ 41781 ChimerSeq STARFusion TCGA_RNA-Seq CABIN1-IGL@ CABIN1 chr22 24466933 + IGL@ chr22 23235962 + Exonic hg19 PAAD TCGA-2J-AABP 15 1 Out-of-frame Intra-chr q11.22 41782 ChimerSeq STARFusion TCGA_RNA-Seq TGFB1-TRPC6 TGFB1 chr19 41838033 - TRPC6 chr11 101743113 - Exonic hg19 PAAD TCGA-2J-AABP 10 21 CDS-5'UTR Inter-chr q13.2 Tumor suppressor gene q22.1 Seq+ 41783 ChimerSeq STARFusion TCGA_RNA-Seq TRIM44-CCDC86 TRIM44 chr11 35706884 + CCDC86 chr11 60617413 + Exonic hg19 PAAD TCGA-2J-AABP 8 17 In-Frame Intra-chr p13 q12.2 Seq+ 41784 ChimerSeq STARFusion TCGA_RNA-Seq HSPBP1-ZNF418 HSPBP1 chr19 55789010 - ZNF418 chr19 58433997 - Exonic hg19 PAAD TCGA-2J-AABP 5 10 CDS-3'UTR Intra-chr q13.42 q13.43 Transcription factor Seq+ 41785 ChimerSeq STARFusion TCGA_RNA-Seq ANKMY1-GPR35 ANKMY1 chr2 241492331 - GPR35 chr2 241569366 + Exonic hg19 PAAD TCGA-2J-AABR 2 4 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 41786 ChimerSeq STARFusion TCGA_RNA-Seq GPR35-ANKMY1 GPR35 chr2 241558448 + ANKMY1 chr2 241468926 - Exonic hg19 PAAD TCGA-2J-AABR 2 3 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 41787 ChimerSeq STARFusion TCGA_RNA-Seq UBAP2-HMGB3P23 UBAP2 chr9 33973181 - HMGB3P23 chr9 31645049 - Exonic hg19 PAAD TCGA-2J-AABU 14 11 Out-of-frame Intra-chr p13.3 p21.1 Seq+ 41788 ChimerSeq STARFusion TCGA_RNA-Seq SREBF2-C22orf42 SREBF2 chr22 42229362 + C22orf42 chr22 32555209 - Exonic hg19 PAAD TCGA-2J-AABT 7 15 CDS-5'UTR Intra-chr q13.2 Transcription factor q12.3 Seq+ 41789 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P2-KLK5 PRSS3P2 chr7 142481912 + KLK5 chr19 51447042 - Exonic hg19 PAAD TCGA-2J-AABV 142 0 5'UTR-CDS Inter-chr q13.41 41790 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-CTRB1 PRSS1 chr7 142460418 + CTRB1 chr16 75258603 + Exonic hg19 PAAD TCGA-2J-AABV 3 110 In-Frame Inter-chr q23.1 41791 ChimerSeq STARFusion TCGA_RNA-Seq CELA3A-PRSS3P2 CELA3A chr1 22336350 + PRSS3P2 chr7 142482344 + Exonic hg19 PAAD TCGA-2J-AABV 3 73 CDS-5'UTR Inter-chr p36.12 41792 ChimerSeq STARFusion TCGA_RNA-Seq CTRB2-CELA3A CTRB2 chr16 75238671 - CELA3A chr1 22313024 + Exonic hg19 PAAD TCGA-2J-AABV 5 64 CDS-5'UTR Inter-chr q23.1 p36.12 41793 ChimerSeq STARFusion TCGA_RNA-Seq CELA3A-CTRC CELA3A chr1 22336350 + CTRC chr1 15773070 + Exonic hg19 PAAD TCGA-2J-AABV 2 69 In-Frame Intra-chr p36.12 p36.21 41794 ChimerSeq STARFusion TCGA_RNA-Seq CTRC-CELA3A CTRC chr1 15766887 + CELA3A chr1 22331940 + Exonic hg19 PAAD TCGA-2J-AABV 3 63 In-Frame Intra-chr p36.21 p36.12 41795 ChimerSeq STARFusion TCGA_RNA-Seq CTRC-CELA3A CTRC chr1 15772244 + CELA3A chr1 22338943 + Exonic hg19 PAAD TCGA-2J-AABV 2 51 In-Frame Intra-chr p36.21 p36.12 41796 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P2-CPA1 PRSS3P2 chr7 142481200 + CPA1 chr7 130027776 + Exonic hg19 PAAD TCGA-2J-AABV 4 40 Out-of-frame Intra-chr q32.2 41797 ChimerSeq STARFusion TCGA_RNA-Seq CLPS-PRSS1 CLPS chr6 35762937 - PRSS1 chr7 142460314 + Exonic hg19 PAAD TCGA-2J-AABV 3 28 Out-of-frame Inter-chr p21.31 41798 ChimerSeq STARFusion TCGA_RNA-Seq CTRB2-CELA3A CTRB2 chr16 75238671 - CELA3A chr1 22336198 + Exonic hg19 PAAD TCGA-2J-AABV 2 31 In-Frame Inter-chr q23.1 p36.12 41799 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P1-KLK6 PRSS3P1 chr7 142471340 + KLK6 chr19 51462572 - Exonic hg19 PAAD TCGA-F2-7273 640 1 Out-of-frame Inter-chr q13.41 Tumor suppressor gene 41800 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P1-KLK6 PRSS3P1 chr7 142481912 + KLK6 chr19 51462572 - Exonic hg19 PAAD TCGA-F2-7273 147 1 Out-of-frame Inter-chr q13.41 Tumor suppressor gene 41801 ChimerSeq STARFusion TCGA_RNA-Seq CTRB1-PRSS1 CTRB1 chr16 75256752 + PRSS1 chr7 142458475 + Exonic hg19 PAAD TCGA-F2-7273 5 152 Out-of-frame Inter-chr q23.1 41802 ChimerSeq STARFusion TCGA_RNA-Seq CTRB2-CELA3A CTRB2 chr16 75238671 - CELA3A chr1 22336198 + Exonic hg19 PAAD TCGA-F2-7273 2 19 In-Frame Inter-chr q23.1 p36.12 41803 ChimerSeq STARFusion TCGA_RNA-Seq GNG12-SPATA6 GNG12 chr1 68243141 - SPATA6 chr1 48851021 - Exonic hg19 PAAD TCGA-2J-AABF 2 12 5'UTR-CDS Intra-chr p31.3 p33 Seq+ 41804 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC9-MROH5 TRAPPC9 chr8 141231558 - MROH5 chr8 142505583 - Exonic hg19 PAAD TCGA-2J-AABH 3 15 Out-of-frame Intra-chr q24.3 Seq+ 41805 ChimerSeq STARFusion TCGA_RNA-Seq ADAM15-CHD1L ADAM15 chr1 155032450 + CHD1L chr1 146739085 + Exonic hg19 PAAD TCGA-2J-AABK 15 17 In-Frame Intra-chr q21.3 q21.1 Seq+ 41806 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L3-CCDC58 SIPA1L3 chr19 38573528 + CCDC58 chr3 122090647 - Exonic hg19 PAAD TCGA-2J-AABO 4 4 Out-of-frame Inter-chr q13.13 q21.1 Seq+ 41807 ChimerSeq STARFusion TCGA_RNA-Seq VSIG1-MID2 VSIG1 chrX 107288409 + MID2 chrX 107169324 + Exonic hg19 PAAD TCGA-US-A77G 1412 5072 In-Frame Intra-chr q22.3 q22.3 Seq+ 41808 ChimerSeq STARFusion TCGA_RNA-Seq BAIAP2L2-PLA2G6 BAIAP2L2 chr22 38506482 - PLA2G6 chr22 38509661 - Exonic hg19 PAAD TCGA-F2-A7TX 81 340 In-Frame Intra-chr q13.1 q13.1 Seq+ 41809 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-RPS4Y1 DHRSX chrX 2209543 - RPS4Y1 chrY 2733129 + Exonic hg19 PAAD TCGA-F2-A7TX 13 53 CDS-5'UTR Inter-chr p22.33 p11.2 Seq+ 41810 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-RPS4Y1 DHRSX chrY 2159543 - RPS4Y1 chrY 2733129 + Exonic hg19 PAAD TCGA-F2-A7TX 7 26 CDS-5'UTR Intra-chr p22.33 p11.2 Seq+ 41811 ChimerSeq STARFusion TCGA_RNA-Seq TMEM63A-LEFTY1 TMEM63A chr1 226053597 - LEFTY1 chr1 226075732 - Exonic hg19 PAAD TCGA-F2-A7TX 4 14 Out-of-frame Intra-chr q42.12 q42.12 Tumor suppressor gene Seq+ 41812 ChimerSeq STARFusion TCGA_RNA-Seq KLK6-PRSS3P2 KLK6 chr19 51465000 - PRSS3P2 chr7 142471642 + Exonic hg19 PAAD TCGA-IB-8127 16 3 CDS-5'UTR Inter-chr q13.41 Tumor suppressor gene 41813 ChimerSeq STARFusion TCGA_RNA-Seq LAMA3-MEP1B LAMA3 chr18 21462009 + MEP1B chr18 29765019 + Exonic hg19 PAAD TCGA-IB-8127 3 9 CDS-5'UTR Intra-chr q11.2 q12.1 41814 ChimerSeq STARFusion TCGA_RNA-Seq CPB1-PNLIP CPB1 chr3 148577791 + PNLIP chr10 118307966 + Exonic hg19 PAAD TCGA-IB-8126 3 235 Out-of-frame Inter-chr q24 q25.3 41815 ChimerSeq STARFusion TCGA_RNA-Seq CELA3A-CTRB2 CELA3A chr1 22333473 + CTRB2 chr16 75238793 - Exonic hg19 PAAD TCGA-IB-8126 3 161 Out-of-frame Inter-chr p36.12 q23.1 41816 ChimerSeq STARFusion TCGA_RNA-Seq CTRB2-CELA3A CTRB2 chr16 75238671 - CELA3A chr1 22336198 + Exonic hg19 PAAD TCGA-IB-8126 3 123 In-Frame Inter-chr q23.1 p36.12 41817 ChimerSeq STARFusion TCGA_RNA-Seq CTRB2-PRSS3P2 CTRB2 chr16 75239298 - PRSS3P2 chr7 142481317 + Exonic hg19 PAAD TCGA-IB-8126 4 112 Out-of-frame Inter-chr q23.1 41818 ChimerSeq STARFusion TCGA_RNA-Seq CELA3A-CTRC CELA3A chr1 22329581 + CTRC chr1 15766989 + Exonic hg19 PAAD TCGA-IB-8126 3 78 In-Frame Intra-chr p36.12 p36.21 41819 ChimerSeq STARFusion TCGA_RNA-Seq CTRC-CELA3A CTRC chr1 15766887 + CELA3A chr1 22331940 + Exonic hg19 PAAD TCGA-IB-8126 3 53 In-Frame Intra-chr p36.21 p36.12 41820 ChimerSeq STARFusion TCGA_RNA-Seq PNLIP-SNX16 PNLIP chr10 118313333 + SNX16 chr8 82713766 - Exonic hg19 PAAD TCGA-IB-8126 8 0 Out-of-frame Inter-chr q25.3 q21.13 41821 ChimerSeq STARFusion TCGA_RNA-Seq GTSE1-ATXN10 GTSE1 chr22 46693374 + ATXN10 chr22 46202837 + Exonic hg19 PAAD TCGA-IB-AAUQ 4 9 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 41822 ChimerSeq STARFusion TCGA_RNA-Seq ACAP3-SCNN1D ACAP3 chr1 1229909 - SCNN1D chr1 1216005 + Exonic hg19 PAAD TCGA-IB-AAUQ 4 6 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 41823 ChimerSeq STARFusion TCGA_RNA-Seq MUC4-PCYT1A MUC4 chr3 195538607 - PCYT1A chr3 195941244 - Exonic hg19 PAAD TCGA-IB-AAUQ 3 4 CDS-3'UTR Intra-chr q29 Seq+ 41824 ChimerSeq STARFusion TCGA_RNA-Seq ATG5-RTN4IP1 ATG5 chr6 106649847 - RTN4IP1 chr6 107040175 - Exonic hg19 PAAD TCGA-IB-AAUQ 2 6 Out-of-frame Intra-chr q21 q21 Tumor suppressor gene Seq+ 41825 ChimerSeq STARFusion TCGA_RNA-Seq PSMA3-ACTR10 PSMA3 chr14 58718960 + ACTR10 chr14 58701088 + Exonic hg19 PAAD TCGA-IB-AAUP 152 303 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 41826 ChimerSeq STARFusion TCGA_RNA-Seq AXIN2-VWA3B AXIN2 chr17 63553924 - VWA3B chr2 98872587 + Exonic hg19 PAAD TCGA-IB-AAUP 6 21 In-Frame Inter-chr q24.1 Tumor suppressor gene q11.2 Seq+ 41827 ChimerSeq STARFusion TCGA_RNA-Seq FAM157C-PAM16 FAM157C chr16 90182891 + PAM16 chr16 4390986 - Exonic hg19 PAAD TCGA-IB-AAUP 3 18 Out-of-frame Intra-chr q24.3 p13.3 41828 ChimerSeq STARFusion TCGA_RNA-Seq SUPT5H-LINC00904 SUPT5H chr19 39936605 + LINC00904 chr19 35389909 - Exonic hg19 PAAD TCGA-IB-AAUP 3 11 Out-of-frame Intra-chr q13.2 q13.11 41829 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P2-KLK5 PRSS3P2 chr7 142481912 + KLK5 chr19 51447042 - Exonic hg19 PAAD TCGA-IB-AAUW 27 0 5'UTR-CDS Inter-chr q13.41 41830 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-PIP5K1P1 KCTD20 chr6 36457998 + PIP5K1P1 chr6 7987765 + Exonic hg19 PAAD TCGA-IB-AAUV 29 0 Out-of-frame Intra-chr p21.31 p24.3 41831 ChimerSeq STARFusion TCGA_RNA-Seq SNCAIP-CSNK1G3 SNCAIP chr5 121739560 + CSNK1G3 chr5 122881111 + Exonic hg19 PAAD TCGA-IB-AAUU 3 8 CDS-5'UTR Intra-chr q23.2 q23.2 Seq+ 41832 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P1-KLK6 PRSS3P1 chr7 142471340 + KLK6 chr19 51462572 - Exonic hg19 PAAD TCGA-HZ-8317 1018 1 Out-of-frame Inter-chr q13.41 Tumor suppressor gene 41833 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P1-KLK6 PRSS3P1 chr7 142481912 + KLK6 chr19 51462572 - Exonic hg19 PAAD TCGA-HZ-8317 214 1 Out-of-frame Inter-chr q13.41 Tumor suppressor gene 41834 ChimerSeq STARFusion TCGA_RNA-Seq FAM49B-CASC8 FAM49B chr8 130915558 - CASC8 chr8 128433208 - Exonic hg19 PAAD TCGA-HZ-8317 6 24 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 41835 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-CFB PRSS1 chr7 142481912 + CFB chr6 31919331 + Exonic hg19 PAAD TCGA-HZ-8317 7 1 Out-of-frame Inter-chr 41836 ChimerSeq STARFusion TCGA_RNA-Seq CHST6-FA2H CHST6 chr16 75515715 - FA2H chr16 74774013 - Exonic hg19 PAAD TCGA-HZ-8317 4 10 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 41837 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R13L-CCDC9 PPP1R13L chr19 45908257 - CCDC9 chr19 47769868 + Exonic hg19 PAAD TCGA-HZ-8315 39 154 5'UTR-CDS Intra-chr q13.32 q13.32 Seq+ 41838 ChimerSeq STARFusion TCGA_RNA-Seq SYNGAP1-COL11A2 SYNGAP1 chr6 33393680 + COL11A2 chr6 33133983 - Exonic hg19 PAAD TCGA-IB-AAUN 4 4 Out-of-frame Intra-chr Seq+ 41839 ChimerSeq STARFusion TCGA_RNA-Seq NUP153-C6orf10 NUP153 chr6 17706508 - C6orf10 chr6 32337760 - Exonic hg19 PAAD TCGA-IB-AAUN 2 11 In-Frame Intra-chr p22.3 Seq+ 41840 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P1-KLK6 PRSS3P1 chr7 142471340 + KLK6 chr19 51462572 - Exonic hg19 PAAD TCGA-IB-AAUM 1033 1 Out-of-frame Inter-chr q13.41 Tumor suppressor gene 41841 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P1-KLK6 PRSS3P1 chr7 142481912 + KLK6 chr19 51462572 - Exonic hg19 PAAD TCGA-IB-AAUM 285 1 Out-of-frame Inter-chr q13.41 Tumor suppressor gene 41842 ChimerSeq STARFusion TCGA_RNA-Seq CTRB2-PRSS1 CTRB2 chr16 75239244 - PRSS1 chr7 142459863 + Exonic hg19 PAAD TCGA-IB-AAUM 4 411 Out-of-frame Inter-chr q23.1 41843 ChimerSeq STARFusion TCGA_RNA-Seq CTRB2-PRSS1 CTRB2 chr16 75239333 - PRSS1 chr7 142459783 + Exonic hg19 PAAD TCGA-IB-AAUM 3 175 Out-of-frame Inter-chr q23.1 41844 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-CTRB2 PRSS1 chr7 142458488 + CTRB2 chr16 75239893 - Exonic hg19 PAAD TCGA-IB-AAUM 6 163 Out-of-frame Inter-chr q23.1 41845 ChimerSeq STARFusion TCGA_RNA-Seq CEL-CPA1 CEL chr9 135959906 + CPA1 chr7 130027861 + Exonic hg19 PAAD TCGA-IB-AAUM 4 80 Out-of-frame Inter-chr q34.13 q32.2 Seq+ 41846 ChimerSeq STARFusion TCGA_RNA-Seq CTRB2-CELA3A CTRB2 chr16 75238671 - CELA3A chr1 22336198 + Exonic hg19 PAAD TCGA-IB-AAUM 4 79 In-Frame Inter-chr q23.1 p36.12 41847 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-CTRB2 PRSS1 chr7 142459850 + CTRB2 chr16 75239255 - Exonic hg19 PAAD TCGA-IB-AAUM 3 77 Out-of-frame Inter-chr q23.1 41848 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P2-CFB PRSS3P2 chr7 142481913 + CFB chr6 31919332 + Exonic hg19 PAAD TCGA-IB-AAUM 15 1 5'UTR-CDS Inter-chr 41849 ChimerSeq STARFusion TCGA_RNA-Seq CELA3A-CTRC CELA3A chr1 22329581 + CTRC chr1 15766989 + Exonic hg19 PAAD TCGA-IB-AAUM 2 39 In-Frame Intra-chr p36.12 p36.21 41850 ChimerSeq STARFusion TCGA_RNA-Seq CTRC-CELA3A CTRC chr1 15766887 + CELA3A chr1 22331940 + Exonic hg19 PAAD TCGA-IB-AAUM 2 33 In-Frame Intra-chr p36.21 p36.12 41851 ChimerSeq STARFusion TCGA_RNA-Seq CELA2A-PDZD7 CELA2A chr1 15790026 + PDZD7 chr10 102771946 - Exonic hg19 PAAD TCGA-IB-AAUM 8 0 Out-of-frame Inter-chr p36.21 q24.31 41852 ChimerSeq STARFusion TCGA_RNA-Seq CEL-NTRK1 CEL chr9 135942592 + NTRK1 chr1 156843425 + Exonic hg19 PAAD TCGA-HZ-7918 80 60 In-Frame Inter-chr q34.13 q23.1 Oncogene Seq+ 41853 ChimerSeq STARFusion TCGA_RNA-Seq SERPINA1-IGH@ SERPINA1 chr14 94844884 - IGH@ chr14 106208437 - Exonic hg19 PAAD TCGA-HZ-7918 4 37 Out-of-frame Intra-chr q32.13 32.33 41854 ChimerSeq STARFusion TCGA_RNA-Seq XRCC5-IGKC XRCC5 chr2 216981645 + IGKC chr2 89161074 - Exonic hg19 PAAD TCGA-HZ-7918 9 1 Out-of-frame Intra-chr q35 Tumor suppressor gene p11.2 41855 ChimerSeq STARFusion TCGA_RNA-Seq SERPINA1-IGHG1 SERPINA1 chr14 94844884 - IGHG1 chr14 106208437 - Exonic hg19 PAAD TCGA-HZ-7918 4 15 Out-of-frame Intra-chr q32.13 q32.33 41856 ChimerSeq STARFusion TCGA_RNA-Seq UBE2Q2-IGH@ UBE2Q2 chr15 76136451 + IGH@ chr14 106209410 - Exonic hg19 PAAD TCGA-HZ-7918 7 1 Out-of-frame Inter-chr q24.2 32.33 41857 ChimerSeq STARFusion TCGA_RNA-Seq UBE2Q2-IGHG1 UBE2Q2 chr15 76136451 + IGHG1 chr14 106209410 - Exonic hg19 PAAD TCGA-HZ-7918 7 1 Out-of-frame Inter-chr q24.2 q32.33 41858 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1E-MB CSNK1E chr22 38794443 - MB chr22 36033255 - Exonic hg19 PAAD TCGA-HZ-8005 4 7 Out-of-frame Intra-chr q13.1 q12.3 Seq+ 41859 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1E-MB CSNK1E chr22 38794443 - MB chr22 36013312 - Exonic hg19 PAAD TCGA-HZ-8005 2 7 5'UTR-5'UTR Intra-chr q13.1 q12.3 Seq+ 41860 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-PNLIP PRSS1 chr7 142459785 + PNLIP chr10 118306917 + Exonic hg19 PAAD TCGA-HZ-8003 3 555 Out-of-frame Inter-chr q25.3 Seq+ 41861 ChimerSeq STARFusion TCGA_RNA-Seq CTRB2-PRSS1 CTRB2 chr16 75238120 - PRSS1 chr7 142459791 + Exonic hg19 PAAD TCGA-HZ-8003 5 514 Out-of-frame Inter-chr q23.1 41862 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-PNLIP PRSS1 chr7 142460396 + PNLIP chr10 118313306 + Exonic hg19 PAAD TCGA-HZ-8003 3 432 Out-of-frame Inter-chr q25.3 Seq+ 41863 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-CTRB2 PRSS1 chr7 142469406 + CTRB2 chr16 75239893 - Exonic hg19 PAAD TCGA-HZ-8003 6 272 Out-of-frame Inter-chr q23.1 41864 ChimerSeq STARFusion TCGA_RNA-Seq CTRB2-PRSS1 CTRB2 chr16 75240000 - PRSS1 chr7 142458480 + Exonic hg19 PAAD TCGA-HZ-8003 5 226 Out-of-frame Inter-chr q23.1 41865 ChimerSeq STARFusion TCGA_RNA-Seq CTRB2-PRSS1 CTRB2 chr16 75238128 - PRSS1 chr7 142459783 + Exonic hg19 PAAD TCGA-HZ-8003 4 226 Out-of-frame Inter-chr q23.1 41866 ChimerSeq STARFusion TCGA_RNA-Seq CTRB2-CELA3A CTRB2 chr16 75240000 - CELA3A chr1 22331940 + Exonic hg19 PAAD TCGA-HZ-8003 6 154 In-Frame Inter-chr q23.1 p36.12 41867 ChimerSeq STARFusion TCGA_RNA-Seq CPA1-CLPS CPA1 chr7 130021685 + CLPS chr6 35765088 - Exonic hg19 PAAD TCGA-HZ-8003 4 148 Out-of-frame Inter-chr q32.2 p21.31 41868 ChimerSeq STARFusion TCGA_RNA-Seq CELA3A-CTRB2 CELA3A chr1 22333462 + CTRB2 chr16 75238804 - Exonic hg19 PAAD TCGA-HZ-8003 4 121 In-Frame Inter-chr p36.12 q23.1 41869 ChimerSeq STARFusion TCGA_RNA-Seq CELA3A-CTRC CELA3A chr1 22329581 + CTRC chr1 15766989 + Exonic hg19 PAAD TCGA-HZ-8003 6 94 In-Frame Intra-chr p36.12 p36.21 41870 ChimerSeq STARFusion TCGA_RNA-Seq CTRB2-CEL CTRB2 chr16 75238670 - CEL chr9 135947075 + Exonic hg19 PAAD TCGA-HZ-8003 4 95 Out-of-frame Inter-chr q23.1 q34.13 41871 ChimerSeq STARFusion TCGA_RNA-Seq CTRB2-CELA3A CTRB2 chr16 75239231 - CELA3A chr1 22333463 + Exonic hg19 PAAD TCGA-HZ-8003 4 81 Out-of-frame Inter-chr q23.1 p36.12 41872 ChimerSeq STARFusion TCGA_RNA-Seq CTRB2-CELA3A CTRB2 chr16 75238671 - CELA3A chr1 22336198 + Exonic hg19 PAAD TCGA-HZ-8003 4 81 In-Frame Inter-chr q23.1 p36.12 41873 ChimerSeq STARFusion TCGA_RNA-Seq CTRB2-CELA3A CTRB2 chr16 75239988 - CELA3A chr1 22331952 + Exonic hg19 PAAD TCGA-HZ-8003 3 81 In-Frame Inter-chr q23.1 p36.12 41874 ChimerSeq STARFusion TCGA_RNA-Seq CTRC-CELA3A CTRC chr1 15772244 + CELA3A chr1 22338943 + Exonic hg19 PAAD TCGA-HZ-8003 2 72 In-Frame Intra-chr p36.21 p36.12 41875 ChimerSeq STARFusion TCGA_RNA-Seq CELA3A-CTRB2 CELA3A chr1 22331948 + CTRB2 chr16 75239893 - Exonic hg19 PAAD TCGA-HZ-8003 3 60 Out-of-frame Inter-chr p36.12 q23.1 41876 ChimerSeq STARFusion TCGA_RNA-Seq CELA3A-CTRB2 CELA3A chr1 22336225 + CTRB2 chr16 75238192 - Exonic hg19 PAAD TCGA-HZ-8003 3 60 Out-of-frame Inter-chr p36.12 q23.1 41877 ChimerSeq STARFusion TCGA_RNA-Seq CELA3A-CTRB2 CELA3A chr1 22333472 + CTRB2 chr16 75238794 - Exonic hg19 PAAD TCGA-HZ-8003 3 60 Out-of-frame Inter-chr p36.12 q23.1 41878 ChimerSeq STARFusion TCGA_RNA-Seq CELA3A-CTRB2 CELA3A chr1 22334008 + CTRB2 chr16 75238220 - Exonic hg19 PAAD TCGA-HZ-8003 3 60 In-Frame Inter-chr p36.12 q23.1 41879 ChimerSeq STARFusion TCGA_RNA-Seq CTRB2-CELA2B CTRB2 chr16 75240000 - CELA2B chr1 15807593 + Exonic hg19 PAAD TCGA-HZ-8003 3 47 In-Frame Inter-chr q23.1 p36.21 41880 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-WASIR1 ETV6 chr12 11905513 + WASIR1 chrY 59349460 - Exonic hg19 PAAD TCGA-HZ-8003 4 8 Out-of-frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q28 41881 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983374 - RSRC2 chr12 122990253 - Exonic hg19 PAAD TCGA-S4-A8RP 37 197 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 41882 ChimerSeq STARFusion TCGA_RNA-Seq RAB9A-EGFL6 RAB9A chrX 13707407 + EGFL6 chrX 13607675 + Exonic hg19 PAAD TCGA-S4-A8RP 13 35 5'UTR-CDS Intra-chr p22.2 p22.2 Seq+ 41883 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-CBY1 TNRC6B chr22 40552186 + CBY1 chr22 39061551 + Exonic hg19 PAAD TCGA-S4-A8RP 2 5 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 41884 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-DYNLRB2 ANKRD11 chr16 89556653 - DYNLRB2 chr16 80583381 + Exonic hg19 PAAD TCGA-XD-AAUI 15 4 5'UTR-CDS Intra-chr q24.3 q23.2 Seq+ 41885 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-LINC00469 KANSL1 chr17 44143903 - LINC00469 chr17 71757165 - Exonic hg19 PAAD TCGA-XD-AAUI 7 16 CDS-3'UTR Intra-chr q25.1 Seq+ 41886 ChimerSeq STARFusion TCGA_RNA-Seq SKAP1-PSMD11 SKAP1 chr17 46423267 - PSMD11 chr17 30773963 + Exonic hg19 PAAD TCGA-XD-AAUI 5 4 In-Frame Intra-chr q21.32 q11.2 Seq+ 41887 ChimerSeq STARFusion TCGA_RNA-Seq SMARCA2-BEND2 SMARCA2 chr9 2039900 + BEND2 chrX 18213562 - Exonic hg19 PAAD TCGA-3A-A9IR 15 64 In-Frame Inter-chr p24.3 Tumor suppressor gene p22.13 Seq+ 41888 ChimerSeq STARFusion TCGA_RNA-Seq CUX1-BRAF CUX1 chr7 101758553 + BRAF chr7 140494267 - Exonic hg19 PAAD TCGA-F2-A44H 2 4 In-Frame Intra-chr q22.1 Tumor suppressor gene Transcription factor q34 TKL:RAF Oncogene Seq+ 41889 ChimerSeq STARFusion TCGA_RNA-Seq CTRB2-PRSS1 CTRB2 chr16 75238128 - PRSS1 chr7 142459783 + Exonic hg19 PAAD TCGA-F2-6880 4 765 Out-of-frame Inter-chr q23.1 41890 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P2-KLK5 PRSS3P2 chr7 142481912 + KLK5 chr19 51447042 - Exonic hg19 PAAD TCGA-F2-6880 165 0 5'UTR-CDS Inter-chr q13.41 41891 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-CTRB2 PRSS1 chr7 142458488 + CTRB2 chr16 75239893 - Exonic hg19 PAAD TCGA-F2-6880 11 480 Out-of-frame Inter-chr q23.1 41892 ChimerSeq STARFusion TCGA_RNA-Seq CTRB2-PRSS1 CTRB2 chr16 75239244 - PRSS1 chr7 142459863 + Exonic hg19 PAAD TCGA-F2-6880 3 404 Out-of-frame Inter-chr q23.1 41893 ChimerSeq STARFusion TCGA_RNA-Seq CTRB2-PRSS1 CTRB2 chr16 75238046 - PRSS1 chr7 142459708 + Exonic hg19 PAAD TCGA-F2-6880 3 404 Out-of-frame Inter-chr q23.1 41894 ChimerSeq STARFusion TCGA_RNA-Seq CTRB2-PRSS1 CTRB2 chr16 75238195 - PRSS1 chr7 142460790 + Exonic hg19 PAAD TCGA-F2-6880 3 404 Out-of-frame Inter-chr q23.1 41895 ChimerSeq STARFusion TCGA_RNA-Seq CTRB2-PRSS1 CTRB2 chr16 75238671 - PRSS1 chr7 142460719 + Exonic hg19 PAAD TCGA-F2-6880 3 404 In-Frame Inter-chr q23.1 41896 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-CTRB2 PRSS1 chr7 142459878 + CTRB2 chr16 75239296 - Exonic hg19 PAAD TCGA-F2-6880 3 266 Out-of-frame Inter-chr q23.1 41897 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-CTRB2 PRSS1 chr7 142460737 + CTRB2 chr16 75239893 - Exonic hg19 PAAD TCGA-F2-6880 3 266 Out-of-frame Inter-chr q23.1 41898 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-CTRB2 PRSS1 chr7 142459850 + CTRB2 chr16 75239255 - Exonic hg19 PAAD TCGA-F2-6880 3 266 Out-of-frame Inter-chr q23.1 41899 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-CTRB2 PRSS1 chr7 142471340 + CTRB2 chr16 75238220 - Exonic hg19 PAAD TCGA-F2-6880 3 266 3'UTR-CDS Inter-chr q23.1 41900 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-CTRB2 PRSS1 chr7 142460418 + CTRB2 chr16 75238220 - Exonic hg19 PAAD TCGA-F2-6880 2 266 In-Frame Inter-chr q23.1 41901 ChimerSeq STARFusion TCGA_RNA-Seq CTRB2-CELA3A CTRB2 chr16 75238671 - CELA3A chr1 22336198 + Exonic hg19 PAAD TCGA-F2-6880 10 232 In-Frame Inter-chr q23.1 p36.12 41902 ChimerSeq STARFusion TCGA_RNA-Seq CELA3A-CTRB2 CELA3A chr1 22333488 + CTRB2 chr16 75239255 - Exonic hg19 PAAD TCGA-F2-6880 3 211 Out-of-frame Inter-chr p36.12 q23.1 41903 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-AMY2A PRSS1 chr7 142458536 + AMY2A chr1 104166747 + Exonic hg19 PAAD TCGA-F2-6880 4 203 Out-of-frame Inter-chr p21.1 41904 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-CELA2A PRSS1 chr7 142460784 + CELA2A chr1 15792622 + Exonic hg19 PAAD TCGA-F2-6880 3 191 Out-of-frame Inter-chr p36.21 41905 ChimerSeq STARFusion TCGA_RNA-Seq PNLIP-AMY2A PNLIP chr10 118321027 + AMY2A chr1 104160705 + Exonic hg19 PAAD TCGA-F2-6880 3 177 Out-of-frame Inter-chr q25.3 p21.1 41906 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-CELA2B PRSS1 chr7 142460784 + CELA2B chr1 15792622 + Exonic hg19 PAAD TCGA-F2-6880 3 154 Out-of-frame Inter-chr p36.21 41907 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P2-KLK12 PRSS3P2 chr7 142481902 + KLK12 chr19 51532724 - Exonic hg19 PAAD TCGA-F2-6880 17 0 Out-of-frame Inter-chr q13.41 41908 ChimerSeq STARFusion TCGA_RNA-Seq OLFM4-PPIAP26 OLFM4 chr13 53608635 + PPIAP26 chr13 53394603 + Exonic hg19 PAAD TCGA-YY-A8LH 9 45 Out-of-frame Intra-chr q14.3 Tumor suppressor gene q14.3 41909 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-SSU72 GNB1 chr1 1735858 - SSU72 chr1 1500296 - Exonic hg19 PAAD TCGA-F2-A44G 3 29 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 41910 ChimerSeq STARFusion TCGA_RNA-Seq FLNB-SLMAP FLNB chr3 58095897 + SLMAP chr3 57843460 + Exonic hg19 PAAD TCGA-LB-A7SX 23 24 In-Frame Intra-chr p14.3 p14.3 Seq+ 41911 ChimerSeq STARFusion TCGA_RNA-Seq KIF26B-C1orf101 KIF26B chr1 245530669 + C1orf101 chr1 244773542 + Exonic hg19 PAAD TCGA-LB-A7SX 17 28 In-Frame Intra-chr Seq+ 41912 ChimerSeq STARFusion TCGA_RNA-Seq TMEM170B-SMIM13 TMEM170B chr6 11538607 + SMIM13 chr6 11134636 + Exonic hg19 PAAD TCGA-LB-A7SX 3 13 Out-of-frame Intra-chr p24.2 p24.2 Seq+ 41913 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-PPP1R1B ERBB2 chr17 37883800 + PPP1R1B chr17 37791860 + Exonic hg19 PAAD TCGA-LB-A7SX 3 8 In-Frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 41914 ChimerSeq STARFusion TCGA_RNA-Seq NEMF-L2HGDH NEMF chr14 50292585 - L2HGDH chr14 50704443 - Exonic hg19 PAAD TCGA-LB-A7SX 4 3 CDS-3'UTR Intra-chr q21.3 q21.3 Seq+ 41915 ChimerSeq STARFusion TCGA_RNA-Seq IQGAP1-SEMA4B IQGAP1 chr15 90934105 + SEMA4B chr15 90760671 + Exonic hg19 PAAD TCGA-LB-A7SX 2 9 Out-of-frame Intra-chr q26.1 q26.1 Seq+ 41916 ChimerSeq STARFusion TCGA_RNA-Seq MAST2-SERBP1 MAST2 chr1 46425149 + SERBP1 chr1 67891968 - Exonic hg19 PAAD TCGA-LB-A7SX 2 7 In-Frame Intra-chr p34.1 AGC:MAST p31.3 41917 ChimerSeq STARFusion TCGA_RNA-Seq MTAP-PTPRD MTAP chr9 21838009 + PTPRD chr9 9766851 - Exonic hg19 PAAD TCGA-US-A779 25 31 CDS-5'UTR Intra-chr p21.3 Tumor suppressor gene Oncogene Tumor suppressor gene Seq+ 41918 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-PCAT1 AGO2 chr8 141545567 - PCAT1 chr8 128018800 + Exonic hg19 PAAD TCGA-US-A779 11 27 Out-of-frame Intra-chr q24.3 q24.21 Seq+ 41919 ChimerSeq STARFusion TCGA_RNA-Seq ZFP36-PAF1 ZFP36 chr19 39897568 + PAF1 chr19 39881864 - Exonic hg19 PAAD TCGA-2J-AAB4 8 247 CDS-5'UTR Intra-chr q13.2 Tumor suppressor gene q13.2 41920 ChimerSeq STARFusion TCGA_RNA-Seq ZFP36-PAF1 ZFP36 chr19 39897568 + PAF1 chr19 39881829 - Exonic hg19 PAAD TCGA-2J-AAB4 4 247 CDS-5'UTR Intra-chr q13.2 Tumor suppressor gene q13.2 41921 ChimerSeq STARFusion TCGA_RNA-Seq ZFP36-PAF1 ZFP36 chr19 39897568 + PAF1 chr19 39880801 - Exonic hg19 PAAD TCGA-2J-AAB4 2 247 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 41922 ChimerSeq STARFusion TCGA_RNA-Seq ROCK1-CHST9 ROCK1 chr18 18539801 - CHST9 chr18 24722869 - Exonic hg19 PAAD TCGA-2J-AAB4 3 5 CDS-5'UTR Intra-chr q11.1 AGC:DMPK q11.2 Seq+ 41923 ChimerSeq STARFusion TCGA_RNA-Seq KMT2D-PTPRR KMT2D chr12 49453396 - PTPRR chr12 71158558 - Exonic hg19 PAAD TCGA-2J-AAB4 2 5 Out-of-frame Intra-chr q13.12 Oncogene q15 Seq+ 41924 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-DDHD2 WHSC1L1 chr8 38172165 - DDHD2 chr8 38090505 + Exonic hg19 PAAD TCGA-PZ-A5RE 2 12 CDS-5'UTR Intra-chr p11.23 Tumor suppressor gene p11.23 Seq+ 41925 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P1-KLK6 PRSS3P1 chr7 142471340 + KLK6 chr19 51462572 - Exonic hg19 PAAD TCGA-2J-AAB9 322 1 Out-of-frame Inter-chr q13.41 Tumor suppressor gene 41926 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P1-KLK6 PRSS3P1 chr7 142481912 + KLK6 chr19 51462572 - Exonic hg19 PAAD TCGA-2J-AAB9 61 1 Out-of-frame Inter-chr q13.41 Tumor suppressor gene 41927 ChimerSeq STARFusion TCGA_RNA-Seq CTRB1-KLK10 CTRB1 chr16 75258086 + KLK10 chr19 51518208 - Exonic hg19 PAAD TCGA-2J-AAB9 3 0 In-Frame Inter-chr q23.1 q13.41 Tumor suppressor gene Seq+ 41928 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525073 - IGHG1 chr14 106209411 - Exonic hg19 PAAD TCGA-US-A774 106 0 Out-of-frame Inter-chr q34 Oncogene q32.33 41929 ChimerSeq STARFusion TCGA_RNA-Seq ZNF493-RPL13A ZNF493 chr19 21580069 + RPL13A chr19 49993107 + Exonic hg19 PAAD TCGA-US-A776 3 13 In-Frame Intra-chr p12 Transcription factor q13.33 Seq+ 41930 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHA2 GAS6 chr13 114525073 - IGHA2 chr14 106054735 - Exonic hg19 PAAD TCGA-HZ-A4BK 9 0 Out-of-frame Inter-chr q34 Oncogene 41931 ChimerSeq STARFusion TCGA_RNA-Seq DHX8-MSI2 DHX8 chr17 41567831 + MSI2 chr17 55674229 + Exonic hg19 PAAD TCGA-HZ-A4BK 5 9 In-Frame Intra-chr q21.31 q22 Seq+ 41932 ChimerSeq STARFusion TCGA_RNA-Seq FRMD4B-OXCT1 FRMD4B chr3 69267473 - OXCT1 chr5 41801172 - Exonic hg19 PAAD TCGA-HZ-8636 6 21 In-Frame Inter-chr p14.1 p13.1 Seq+ 41933 ChimerSeq STARFusion TCGA_RNA-Seq FRMD4B-OXCT1 FRMD4B chr3 69271009 - OXCT1 chr5 41801172 - Exonic hg19 PAAD TCGA-HZ-8636 4 21 Out-of-frame Inter-chr p14.1 p13.1 Seq+ 41934 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF3-ARF4 ARHGEF3 chr3 56916320 - ARF4 chr3 57558025 - Exonic hg19 PAAD TCGA-HZ-8637 18 88 In-Frame Intra-chr p14.3 p14.3 Seq+ 41935 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7B-RBX1 ZC3H7B chr22 41752812 + RBX1 chr22 41368480 + Exonic hg19 PAAD TCGA-HZ-8637 5 33 In-Frame Intra-chr q13.2 q13.2 Seq+ 41936 ChimerSeq STARFusion TCGA_RNA-Seq REV1-AFF3 REV1 chr2 100065798 - AFF3 chr2 100185377 - Exonic hg19 PAAD TCGA-HZ-8637 6 10 In-Frame Intra-chr q11.2 q11.2 Oncogene Seq+ 41937 ChimerSeq STARFusion TCGA_RNA-Seq OR8B5P-IGL@ OR8B5P chr11 124227738 - IGL@ chr22 23237554 + Exonic hg19 PAAD TCGA-HZ-8638 32 0 Out-of-frame Inter-chr q11.22 41938 ChimerSeq STARFusion TCGA_RNA-Seq OR8B5P-IGLC1 OR8B5P chr11 124227738 - IGLC1 chr22 23237554 + Exonic hg19 PAAD TCGA-HZ-8638 32 0 Out-of-frame Inter-chr q11.22 41939 ChimerSeq STARFusion TCGA_RNA-Seq OR8B5P-IGLL5 OR8B5P chr11 124227738 - IGLL5 chr22 23237554 + Exonic hg19 PAAD TCGA-HZ-8638 32 0 Out-of-frame Inter-chr q11.22 41940 ChimerSeq STARFusion TCGA_RNA-Seq PTEN-STAMBPL1 PTEN chr10 89653866 + STAMBPL1 chr10 90661413 + Exonic hg19 PAAD TCGA-S4-A8RO 2 10 CDS-5'UTR Intra-chr q23.31 Oncogene Tumor suppressor gene q23.31 41941 ChimerSeq STARFusion TCGA_RNA-Seq TACC2-MAP3K5 TACC2 chr10 123779396 + MAP3K5 chr6 136932525 - Exonic hg19 PAAD TCGA-HZ-A49G 2 7 5'UTR-CDS Inter-chr q26.13 q23.3 STE:STE11 Seq+ 41942 ChimerSeq STARFusion TCGA_RNA-Seq LRIG3-ATF7 LRIG3 chr12 59307763 - ATF7 chr12 53994805 - Exonic hg19 PAAD TCGA-HZ-A49I 31 116 CDS-5'UTR Intra-chr q14.1 Tumor suppressor gene q13.13 Transcription factor Seq+ 41943 ChimerSeq STARFusion TCGA_RNA-Seq AXL-CDRT1 AXL chr19 41737203 + CDRT1 chr17 15469667 - Exonic hg19 PAAD TCGA-HZ-A49I 21 39 CDS-3'UTR Inter-chr q13.2 TK:Axl Oncogene p12 Seq+ 41944 ChimerSeq STARFusion TCGA_RNA-Seq AXL-CDRT1 AXL chr19 41737203 + CDRT1 chr17 15469667 - Exonic hg19 PAAD TCGA-HZ-A49I 10 26 CDS-3'UTR Inter-chr q13.2 TK:Axl Oncogene p12 Seq+ 41945 ChimerSeq STARFusion TCGA_RNA-Seq PPHLN1-TIMELESS PPHLN1 chr12 42787491 + TIMELESS chr12 56818936 - Exonic hg19 PAAD TCGA-HZ-A49I 7 34 In-Frame Intra-chr q12 q13.3 Seq+ 41946 ChimerSeq STARFusion TCGA_RNA-Seq SBF1-MLC1 SBF1 chr22 50913215 - MLC1 chr22 50506984 - Exonic hg19 PAAD TCGA-HV-A5A6 12 15 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 41947 ChimerSeq STARFusion TCGA_RNA-Seq ARF3-WNT10B ARF3 chr12 49351093 - WNT10B chr12 49364352 - Exonic hg19 PAAD TCGA-HV-A5A5 3 19 5'UTR-5'UTR Intra-chr q13.12 q13.12 Seq+ 41948 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525072 - IGHG1 chr14 106209410 - Exonic hg19 PAAD TCGA-Q3-A5QY 14 0 Out-of-frame Inter-chr q34 Oncogene q32.33 41949 ChimerSeq STARFusion TCGA_RNA-Seq CNOT4-CALD1 CNOT4 chr7 135194637 - CALD1 chr7 134613505 + Exonic hg19 PAAD TCGA-HZ-A9TJ 5 16 5'UTR-CDS Intra-chr q33 q33 Seq+ 41950 ChimerSeq STARFusion TCGA_RNA-Seq CNOT4-TMEM178B CNOT4 chr7 135194637 - TMEM178B chr7 140912391 + Exonic hg19 PAAD TCGA-HZ-A9TJ 4 8 Out-of-frame Intra-chr q33 q34 41951 ChimerSeq STARFusion TCGA_RNA-Seq PRDM2-BMP8A PRDM2 chr1 14075982 + BMP8A chr1 39976846 + Exonic hg19 PAAD TCGA-HZ-A9TJ 5 2 In-Frame Intra-chr p36.21 Tumor suppressor gene Transcription factor p34.3 Seq+ 41952 ChimerSeq STARFusion TCGA_RNA-Seq CASZ1-SLC9A1 CASZ1 chr1 10753931 - SLC9A1 chr1 27440777 - Exonic hg19 PAAD TCGA-3A-A9J0 3 55 In-Frame Intra-chr p36.22 Transcription factor p36.11 Seq+ 41953 ChimerSeq STARFusion TCGA_RNA-Seq RAB2A-STMN2 RAB2A chr8 61429812 + STMN2 chr8 80549037 + Exonic hg19 PAAD TCGA-3A-A9J0 5 35 In-Frame Intra-chr q12.1 q21.13 Seq+ 41954 ChimerSeq STARFusion TCGA_RNA-Seq STX8-RTN1 STX8 chr17 9281869 - RTN1 chr14 60074210 - Exonic hg19 PAAD TCGA-3A-A9J0 6 20 In-Frame Inter-chr p13.1 q23.1 Seq+ 41955 ChimerSeq STARFusion TCGA_RNA-Seq ZNF584-RPS5 ZNF584 chr19 58913029 + RPS5 chr19 58899504 + Exonic hg19 PAAD TCGA-3A-A9J0 6 17 5'UTR-5'UTR Intra-chr q13.43 Transcription factor q13.43 41956 ChimerSeq STARFusion TCGA_RNA-Seq NF1-IKZF3 NF1 chr17 29563039 + IKZF3 chr17 37988404 - Exonic hg19 PAAD TCGA-3A-A9J0 5 19 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q21.1 Tumor suppressor gene Transcription factor Seq+ 41957 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-TECPR1 IGH@ chr14 106967049 - TECPR1 chr7 97845639 - Exonic hg19 PAAD TCGA-3A-A9J0 5 1 Out-of-frame Inter-chr 32.33 q21.3 41958 ChimerSeq STARFusion TCGA_RNA-Seq CDKN2A-IFNA22P CDKN2A chr9 21994138 - IFNA22P chr9 21278426 - Exonic hg19 PAAD TCGA-3A-A9J0 3 4 CDS-3'UTR Intra-chr p21.3 Oncogene Tumor suppressor gene p21.3 Seq+ 41959 ChimerSeq STARFusion TCGA_RNA-Seq DDT-GSTT1 DDT chr22 24315957 - GSTT1 chr22 24379511 - Exonic hg19 PAAD TCGA-HV-A7OP 3 16 In-Frame Intra-chr Tumor suppressor gene 41960 ChimerSeq STARFusion TCGA_RNA-Seq DDTL-GSTT1 DDTL chr22 24309749 + GSTT1 chr22 24379511 - Exonic hg19 PAAD TCGA-HV-A7OP 3 14 In-Frame Intra-chr Tumor suppressor gene 41961 ChimerSeq STARFusion TCGA_RNA-Seq DDT-GSTT1 DDT chr22 24315957 - GSTT1 chr22 24376617 - Exonic hg19 PAAD TCGA-HV-A7OP 2 16 Out-of-frame Intra-chr Tumor suppressor gene 41962 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 PAAD TCGA-HV-A7OP 6 0 Out-of-frame Inter-chr q13.33 p21.1 41963 ChimerSeq STARFusion TCGA_RNA-Seq TAF12-ATAD3C TAF12 chr1 28969504 - ATAD3C chr1 1403764 + Exonic hg19 PAAD TCGA-Q3-AA2A 5 22 5'UTR-CDS Intra-chr p35.3 p36.33 Seq+ 41964 ChimerSeq STARFusion TCGA_RNA-Seq SEH1L-IMPA2 SEH1L chr18 12951904 + IMPA2 chr18 11999053 + Exonic hg19 PAAD TCGA-IB-A7M4 17 53 In-Frame Intra-chr p11.21 p11.21 Seq+ 41965 ChimerSeq STARFusion TCGA_RNA-Seq SEH1L-IMPA2 SEH1L chr18 12948231 + IMPA2 chr18 11999053 + Exonic hg19 PAAD TCGA-IB-A7M4 2 45 In-Frame Intra-chr p11.21 p11.21 Seq+ 41966 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-CTRB1 PRSS1 chr7 142469406 + CTRB1 chr16 75256864 + Exonic hg19 PAAD TCGA-LB-A9Q5 9 170 Out-of-frame Inter-chr q23.1 41967 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-PNLIP PRSS1 chr7 142458510 + PNLIP chr10 118310659 + Exonic hg19 PAAD TCGA-LB-A9Q5 4 121 Out-of-frame Inter-chr q25.3 Seq+ 41968 ChimerSeq STARFusion TCGA_RNA-Seq CPA1-CTRB1 CPA1 chr7 130024421 + CTRB1 chr16 75256903 + Exonic hg19 PAAD TCGA-LB-A9Q5 3 67 Out-of-frame Inter-chr q32.2 q23.1 41969 ChimerSeq STARFusion TCGA_RNA-Seq CELA3A-CTRC CELA3A chr1 22329581 + CTRC chr1 15766989 + Exonic hg19 PAAD TCGA-LB-A9Q5 4 60 In-Frame Intra-chr p36.12 p36.21 41970 ChimerSeq STARFusion TCGA_RNA-Seq CLPS-PRSS1 CLPS chr6 35762927 - PRSS1 chr7 142459635 + Exonic hg19 PAAD TCGA-LB-A9Q5 3 49 Out-of-frame Inter-chr p21.31 41971 ChimerSeq STARFusion TCGA_RNA-Seq CTRB2-CEL CTRB2 chr16 75238670 - CEL chr9 135939855 + Exonic hg19 PAAD TCGA-LB-A9Q5 3 45 Out-of-frame Inter-chr q23.1 q34.13 41972 ChimerSeq STARFusion TCGA_RNA-Seq CTRB2-CELA3A CTRB2 chr16 75238671 - CELA3A chr1 22336198 + Exonic hg19 PAAD TCGA-LB-A9Q5 2 32 In-Frame Inter-chr q23.1 p36.12 41973 ChimerSeq STARFusion TCGA_RNA-Seq HIBCH-PLA2G1B HIBCH chr2 191116234 - PLA2G1B chr12 120763833 - Exonic hg19 PAAD TCGA-LB-A9Q5 9 0 Out-of-frame Inter-chr q32.2 q24.31 41974 ChimerSeq STARFusion TCGA_RNA-Seq ETF1-HSPA9 ETF1 chr5 137878522 - HSPA9 chr5 137897478 - Exonic hg19 PAAD TCGA-LB-A9Q5 2 14 Out-of-frame Intra-chr q31.2 q31.2 Seq+ 41975 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPC-SUPT16H HNRNPC chr14 21731470 - SUPT16H chr14 21841589 - Exonic hg19 PAAD TCGA-IB-A6UF 18 31 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 41976 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPC-SUPT16H HNRNPC chr14 21730760 - SUPT16H chr14 21841589 - Exonic hg19 PAAD TCGA-IB-A6UF 6 31 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 41977 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-CHRAC1 AGO2 chr8 141645584 - CHRAC1 chr8 141524468 + Exonic hg19 PAAD TCGA-IB-A6UF 4 28 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 41978 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-CHRAC1 AGO2 chr8 141615896 - CHRAC1 chr8 141524468 + Exonic hg19 PAAD TCGA-IB-A6UF 3 28 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 41979 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L2-EFHD1 DIS3L2 chr2 233028342 + EFHD1 chr2 233527512 + Exonic hg19 PAAD TCGA-IB-A6UF 2 16 In-Frame Intra-chr q37.1 q37.1 Seq+ 41980 ChimerSeq STARFusion TCGA_RNA-Seq PKP2-MRPS35 PKP2 chr12 32949043 - MRPS35 chr12 27888380 + Exonic hg19 PAAD TCGA-IB-A6UF 2 11 Out-of-frame Intra-chr p11.21 p11.22 Seq+ 41981 ChimerSeq STARFusion TCGA_RNA-Seq PKP2-MRPS35 PKP2 chr12 32949043 - MRPS35 chr12 27890472 + Exonic hg19 PAAD TCGA-IB-A6UF 2 11 In-Frame Intra-chr p11.21 p11.22 Seq+ 41982 ChimerSeq STARFusion TCGA_RNA-Seq KCTD5-CCNF KCTD5 chr16 2746044 + CCNF chr16 2493650 + Exonic hg19 PAAD TCGA-IB-A6UF 2 8 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 41983 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P2-KLK5 PRSS3P2 chr7 142481912 + KLK5 chr19 51447042 - Exonic hg19 PAAD TCGA-IB-A6UG 125 0 5'UTR-CDS Inter-chr q13.41 41984 ChimerSeq STARFusion TCGA_RNA-Seq CTRB1-PRSS1 CTRB1 chr16 75258086 + PRSS1 chr7 142460719 + Exonic hg19 PAAD TCGA-IB-A6UG 2 71 In-Frame Inter-chr q23.1 41985 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-ENTHD1 MKL1 chr22 40948110 - ENTHD1 chr22 40161614 - Exonic hg19 PAAD TCGA-IB-A6UG 4 13 5'UTR-CDS Intra-chr q13.2 q13.1 Seq+ 41986 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-LRP5 PPP6R3 chr11 68318654 + LRP5 chr11 68170951 + Exonic hg19 PAAD TCGA-IB-A7LX 9 31 In-Frame Intra-chr q13.2 q13.2 Seq+ 41987 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-LRP5 PPP6R3 chr11 68315672 + LRP5 chr11 68170951 + Exonic hg19 PAAD TCGA-IB-A7LX 4 29 In-Frame Intra-chr q13.2 q13.2 Seq+ 41988 ChimerSeq STARFusion TCGA_RNA-Seq AHI1-HBS1L AHI1 chr6 135715914 - HBS1L chr6 135287611 - Exonic hg19 PAAD TCGA-IB-A7LX 3 15 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 41989 ChimerSeq STARFusion TCGA_RNA-Seq SDC2-LOC100127983 SDC2 chr8 97506559 + LOC100127983 chr8 91992689 - Exonic hg19 PCPG TCGA-SR-A6MP-01A 5 20 CDS-5'UTR Intra-chr q22.1 41990 ChimerSeq STARFusion TCGA_RNA-Seq EFR3A-SLFN12L EFR3A chr8 132958880 + SLFN12L chr17 33805204 - Exonic hg19 PCPG TCGA-SR-A6MP-01A 4 5 Out-of-frame Inter-chr q24.22 q12 Seq+ 41991 ChimerSeq STARFusion TCGA_RNA-Seq PIGK-CSGALNACT1 PIGK chr1 77672325 - CSGALNACT1 chr8 19363641 - Exonic hg19 PCPG TCGA-SR-A6MP-01A 3 6 CDS-5'UTR Inter-chr p31.1 p21.3 Seq+ 41992 ChimerSeq STARFusion TCGA_RNA-Seq SMURF2-TEKT3 SMURF2 chr17 62582204 - TEKT3 chr17 15234931 - Exonic hg19 PCPG TCGA-SR-A6MP-01A 3 3 CDS-5'UTR Intra-chr q24.1 p12 Seq+ 41993 ChimerSeq STARFusion TCGA_RNA-Seq USP33-CDK12 USP33 chr1 78225328 - CDK12 chr17 37627132 + Exonic hg19 PCPG TCGA-SR-A6MP-01A 2 6 5'UTR-CDS Inter-chr p31.1 Tumor suppressor gene q12 Oncogene Seq+ 41994 ChimerSeq STARFusion TCGA_RNA-Seq GGA1-CDC42EP1 GGA1 chr22 38004910 + CDC42EP1 chr22 37962079 + Exonic hg19 PCPG TCGA-P7-A5NX-01A 9 44 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 41995 ChimerSeq STARFusion TCGA_RNA-Seq ISCA1-LINGO2 ISCA1 chr9 88897293 - LINGO2 chr9 28670278 - Exonic hg19 PCPG TCGA-P7-A5NX-01A 6 2 CDS-5'UTR Intra-chr q21.33 p21.1 Seq+ 41996 ChimerSeq STARFusion TCGA_RNA-Seq TMEM245-SDHAP1 TMEM245 chr9 111826757 - SDHAP1 chr3 195690292 - Exonic hg19 PCPG TCGA-P7-A5NX-01A 5 4 CDS-3'UTR Inter-chr q31.3 q29 Seq+ 41997 ChimerSeq STARFusion TCGA_RNA-Seq GSK3B-WNK2 GSK3B chr3 119812194 - WNK2 chr9 96070610 + Exonic hg19 PCPG TCGA-P7-A5NX-01A 2 10 In-Frame Inter-chr q13.33 CMGC:GSK Tumor suppressor gene q22.31 Tumor suppressor gene Seq+ 41998 ChimerSeq STARFusion TCGA_RNA-Seq SOCS5-ADCY2 SOCS5 chr2 46926588 + ADCY2 chr5 7520851 + Exonic hg19 PCPG TCGA-W2-A7HC-01A 10 14 5'UTR-CDS Inter-chr p21 p15.31 Seq+ 41999 ChimerSeq STARFusion TCGA_RNA-Seq APIP-S100A13 APIP chr11 34937775 - S100A13 chr1 153599009 - Exonic hg19 PCPG TCGA-RW-A686-01A 7 19 CDS-5'UTR Inter-chr p13 q21.3 Seq+ 42000 ChimerSeq STARFusion TCGA_RNA-Seq BPHL-MNF1 BPHL chr6 3119081 + MNF1 chr6 33665527 - Exonic hg19 PCPG TCGA-RW-A686-01A 7 12 Out-of-frame Intra-chr p25.2 42001 ChimerSeq STARFusion TCGA_RNA-Seq APIP-S100A13 APIP chr11 34937775 - S100A13 chr1 153604716 - Exonic hg19 PCPG TCGA-RW-A686-01A 2 19 CDS-5'UTR Inter-chr p13 q21.3 Seq+ 42002 ChimerSeq STARFusion TCGA_RNA-Seq UBTF-MAML3 UBTF chr17 42287492 - MAML3 chr4 140812121 - Exonic hg19 PCPG TCGA-RW-A686-01A 3 3 In-Frame Inter-chr q21.31 q31.1 Seq+ 42003 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 PCPG TCGA-RW-A686-01A 2 0 In-Frame Intra-chr p11.21 p11.21 42004 ChimerSeq STARFusion TCGA_RNA-Seq WDTC1-FNBP1L WDTC1 chr1 27614352 + FNBP1L chr1 94000262 + Exonic hg19 PCPG TCGA-S7-A7WT-01A 6 9 Out-of-frame Intra-chr p36.11 p22.1 Seq+ 42005 ChimerSeq STARFusion TCGA_RNA-Seq MAP1B-NDFIP1 MAP1B chr5 71411626 + NDFIP1 chr5 141511373 + Exonic hg19 PCPG TCGA-SR-A6MR-01A 2 6 Out-of-frame Intra-chr q13.2 q31.3 Seq+ 42006 ChimerSeq STARFusion TCGA_RNA-Seq CHGA-PENK CHGA chr14 93399009 + PENK chr8 57354134 - Exonic hg19 PCPG TCGA-S7-A7WN-01A 3 125 Out-of-frame Inter-chr q32.12 q12.1 42007 ChimerSeq STARFusion TCGA_RNA-Seq SCG2-CHGB SCG2 chr2 224463240 - CHGB chr20 5903342 + Exonic hg19 PCPG TCGA-S7-A7WN-01A 3 114 Out-of-frame Inter-chr q36.1 Tumor suppressor gene p12.3 42008 ChimerSeq STARFusion TCGA_RNA-Seq HS6ST3-STK24 HS6ST3 chr13 96743823 + STK24 chr13 99134575 - Exonic hg19 PCPG TCGA-S7-A7WN-01A 2 0 Out-of-frame Intra-chr q32.1 q32.2 42009 ChimerSeq STARFusion TCGA_RNA-Seq RALGAPA2-BSCL2 RALGAPA2 chr20 20610007 - BSCL2 chr11 62462183 - Exonic hg19 PCPG TCGA-WB-A81D-01A 26 102 In-Frame Inter-chr p11.23 q12.3 Seq+ 42010 ChimerSeq STARFusion TCGA_RNA-Seq TMEM178B-DPP6 TMEM178B chr7 140912504 + DPP6 chr7 154561127 + Exonic hg19 PCPG TCGA-WB-A81D-01A 15 107 Out-of-frame Intra-chr q34 Seq+ 42011 ChimerSeq STARFusion TCGA_RNA-Seq MSH2-SLCO6A1 MSH2 chr2 47672796 + SLCO6A1 chr5 101709198 - Exonic hg19 PCPG TCGA-WB-A81D-01A 6 19 Out-of-frame Inter-chr p21 Oncogene Tumor suppressor gene q21.1 Seq+ 42012 ChimerSeq STARFusion TCGA_RNA-Seq DLK1-C1QB DLK1 chr14 101198516 + C1QB chr1 22987904 + Exonic hg19 PCPG TCGA-QR-A706-01A 9 1 Out-of-frame Inter-chr q32.2 Tumor suppressor gene p36.12 42013 ChimerSeq STARFusion TCGA_RNA-Seq TIMM23B-LINC00843 TIMM23B chr10 51387763 + LINC00843 chr10 51732772 + Exonic hg19 PCPG TCGA-SR-A6MQ-01A 12 62 Out-of-frame Intra-chr q11.23 q11.23 42014 ChimerSeq STARFusion TCGA_RNA-Seq CHGA-IGF2 CHGA chr14 93396090 + IGF2 chr11 2152922 - Exonic hg19 PCPG TCGA-QT-A7U0-01A 4 164 Out-of-frame Inter-chr q32.12 p15.5 Oncogene 42015 ChimerSeq STARFusion TCGA_RNA-Seq TRIM62-IGF2 TRIM62 chr1 33613041 - IGF2 chr11 2154904 - Exonic hg19 PCPG TCGA-QT-A7U0-01A 3 1 Out-of-frame Inter-chr p35.1 Tumor suppressor gene p15.5 Oncogene 42016 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 PCPG TCGA-QT-A7U0-01A 2 3 CDS-5'UTR Intra-chr q23 Seq+ 42017 ChimerSeq STARFusion TCGA_RNA-Seq ATP9B-CHGB ATP9B chr18 77134093 + CHGB chr20 5903356 + Exonic hg19 PCPG TCGA-WB-A81T-01A 4 1 Out-of-frame Inter-chr p12.3 42018 ChimerSeq STARFusion TCGA_RNA-Seq CHGB-IDS CHGB chr20 5904660 + IDS chrX 148563060 - Exonic hg19 PCPG TCGA-WB-A81T-01A 3 2 Out-of-frame Inter-chr p12.3 q28 42019 ChimerSeq STARFusion TCGA_RNA-Seq HPGDS-MAP7 HPGDS chr4 95223297 - MAP7 chr6 136677932 - Exonic hg19 PCPG TCGA-WB-A81T-01A 2 1 Out-of-frame Inter-chr q22.3 q23.3 42020 ChimerSeq STARFusion TCGA_RNA-Seq HTATSF1-BRS3 HTATSF1 chrX 135586622 + BRS3 chrX 135572292 + Exonic hg19 PCPG TCGA-QR-A6GZ-05A 6 12 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 42021 ChimerSeq STARFusion TCGA_RNA-Seq DUSP2-CHGA DUSP2 chr2 96810156 - CHGA chr14 93398852 + Exonic hg19 PCPG TCGA-QR-A6GZ-05A 5 1 Out-of-frame Inter-chr q11.2 q32.12 42022 ChimerSeq STARFusion TCGA_RNA-Seq EYA4-LINC00326 EYA4 chr6 133703579 + LINC00326 chr6 133427234 + Exonic hg19 PCPG TCGA-QR-A6GY-01A 4 25 CDS-5'UTR Intra-chr q23.2 Tumor suppressor gene q23.2 42023 ChimerSeq STARFusion TCGA_RNA-Seq EYA4-LINC00326 EYA4 chr6 133703579 + LINC00326 chr6 133417649 + Exonic hg19 PCPG TCGA-QR-A6GY-01A 3 25 CDS-5'UTR Intra-chr q23.2 Tumor suppressor gene q23.2 42024 ChimerSeq STARFusion TCGA_RNA-Seq MEG3-GNAS MEG3 chr14 101311870 + GNAS chr20 57470667 + Exonic hg19 PCPG TCGA-QR-A70N-01A 2 2 5'UTR-5'UTR Inter-chr q32.2 Tumor suppressor gene q13.32 Oncogene 42025 ChimerSeq STARFusion TCGA_RNA-Seq EPB41-YTHDF2 EPB41 chr1 29213722 + YTHDF2 chr1 29068940 + Exonic hg19 PCPG TCGA-QR-A70V-01A 3 9 5'UTR-CDS Intra-chr p35.3 Tumor suppressor gene p35.3 Seq+ 42026 ChimerSeq STARFusion TCGA_RNA-Seq CC2D1A-ZMYND8 CC2D1A chr19 14030015 + ZMYND8 chr20 45938948 - Exonic hg19 PCPG TCGA-WB-A818-01A 4 11 In-Frame Inter-chr p13.12 Transcription factor q13.12 Seq+ 42027 ChimerSeq STARFusion TCGA_RNA-Seq FAM167A-CHGB FAM167A chr8 11279970 - CHGB chr20 5902981 + Exonic hg19 PCPG TCGA-WB-A818-01A 5 1 3'UTR-CDS Inter-chr p23.1 p12.3 42028 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 PCPG TCGA-WB-A81Q-01A 3 7 CDS-5'UTR Intra-chr q23 Seq+ 42029 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 PCPG TCGA-SR-A6MT-01A 7 2 CDS-5'UTR Intra-chr q23 Seq+ 42030 ChimerSeq STARFusion TCGA_RNA-Seq CACNA1C-PIAS4 CACNA1C chr12 2162777 + PIAS4 chr19 4033098 + Exonic hg19 PCPG TCGA-RW-A68B-01A 2 4 In-Frame Inter-chr p13.33 p13.3 Seq+ 42031 ChimerSeq STARFusion TCGA_RNA-Seq TIMM23B-LINC00843 TIMM23B chr10 51387763 + LINC00843 chr10 51732772 + Exonic hg19 PCPG TCGA-QR-A6GU-01A 5 18 Out-of-frame Intra-chr q11.23 q11.23 42032 ChimerSeq STARFusion TCGA_RNA-Seq APPBP2-RAB5C APPBP2 chr17 58571827 - RAB5C chr17 40280818 - Exonic hg19 PCPG TCGA-QR-A70G-01B 27 66 In-Frame Intra-chr q23.2 q21.2 Seq+ 42033 ChimerSeq STARFusion TCGA_RNA-Seq PHF21A-TTC25 PHF21A chr11 46098305 - TTC25 chr17 40117011 + Exonic hg19 PCPG TCGA-QR-A70G-01B 13 73 Out-of-frame Inter-chr p11.2 Transcription factor q21.2 Seq+ 42034 ChimerSeq STARFusion TCGA_RNA-Seq DLK1-C1QB DLK1 chr14 101198516 + C1QB chr1 22987904 + Exonic hg19 PCPG TCGA-QR-A70G-01B 6 1 Out-of-frame Inter-chr q32.2 Tumor suppressor gene p36.12 42035 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 PCPG TCGA-QR-A70G-01B 3 1 In-Frame Intra-chr p11.21 p11.21 42036 ChimerSeq STARFusion TCGA_RNA-Seq CHGA-DLK1 CHGA chr14 93401530 + DLK1 chr14 101201380 + Exonic hg19 PCPG TCGA-RT-A6YA-01A 3 7 Out-of-frame Intra-chr q32.12 q32.2 Tumor suppressor gene 42037 ChimerSeq STARFusion TCGA_RNA-Seq DPP6-GGNBP2 DPP6 chr7 154172122 + GGNBP2 chr17 34937774 + Exonic hg19 PCPG TCGA-WB-A81W-01A 13 26 Out-of-frame Inter-chr Tumor suppressor gene Seq+ 42038 ChimerSeq STARFusion TCGA_RNA-Seq PTPN21-EML5 PTPN21 chr14 88962757 - EML5 chr14 89110855 - Exonic hg19 PCPG TCGA-WB-A81W-01A 4 3 In-Frame Intra-chr q31.3 q31.3 Seq+ 42039 ChimerSeq STARFusion TCGA_RNA-Seq NPY-IGF2 NPY chr7 24329199 + IGF2 chr11 2150528 - Exonic hg19 PCPG TCGA-SR-A6MS-01A 3 30 Out-of-frame Inter-chr p15.3 p15.5 Oncogene Seq+ 42040 ChimerSeq STARFusion TCGA_RNA-Seq C12orf60-PDE6H C12orf60 chr12 14956685 + PDE6H chr12 15130906 + Exonic hg19 PCPG TCGA-SR-A6MS-01A 2 9 5'UTR-5'UTR Intra-chr p12.3 p12.3 42041 ChimerSeq STARFusion TCGA_RNA-Seq JAZF1-TAX1BP1 JAZF1 chr7 27880317 - TAX1BP1 chr7 27867357 + Exonic hg19 PCPG TCGA-SA-A6C2-01A 2 1 In-Frame Intra-chr p15.1 Transcription factor p15.2 Seq+ 42042 ChimerSeq STARFusion TCGA_RNA-Seq CHGA-PDE4A CHGA chr14 93399084 + PDE4A chr19 10577651 + Exonic hg19 PCPG TCGA-QT-A5XM-01A 10 1 Out-of-frame Inter-chr q32.12 p13.2 42043 ChimerSeq STARFusion TCGA_RNA-Seq DNPEP-PHF14 DNPEP chr2 220246057 - PHF14 chr7 11053374 + Exonic hg19 PCPG TCGA-QT-A5XM-01A 2 3 Out-of-frame Inter-chr q35 p21.3 42044 ChimerSeq STARFusion TCGA_RNA-Seq CALR-CHGB CALR chr19 13054676 + CHGB chr20 5903917 + Exonic hg19 PCPG TCGA-S7-A7X2-01A 3 8 Out-of-frame Inter-chr p13.13 p12.3 42045 ChimerSeq STARFusion TCGA_RNA-Seq CHGB-IDS CHGB chr20 5904660 + IDS chrX 148563060 - Exonic hg19 PCPG TCGA-S7-A7X2-01A 3 1 Out-of-frame Inter-chr p12.3 q28 42046 ChimerSeq STARFusion TCGA_RNA-Seq ST3GAL3-GLCCI1 ST3GAL3 chr1 44202051 + GLCCI1 chr7 8124527 + Exonic hg19 PCPG TCGA-WB-A81P-01A 5 27 In-Frame Inter-chr p34.1 p21.3 Seq+ 42047 ChimerSeq STARFusion TCGA_RNA-Seq ST3GAL3-GLCCI1 ST3GAL3 chr1 44202051 + GLCCI1 chr7 8125823 + Exonic hg19 PCPG TCGA-WB-A81P-01A 3 27 Out-of-frame Inter-chr p34.1 p21.3 Seq+ 42048 ChimerSeq STARFusion TCGA_RNA-Seq RGAG4-CHGA RGAG4 chrX 71350163 - CHGA chr14 93398746 + Exonic hg19 PCPG TCGA-WB-A81P-01A 3 1 Out-of-frame Inter-chr q32.12 42049 ChimerSeq STARFusion TCGA_RNA-Seq RSPO4-ANGPT4 RSPO4 chr20 982729 - ANGPT4 chr20 869082 - Exonic hg19 PCPG TCGA-WB-A81P-01A 2 0 Out-of-frame Intra-chr p13 p13 42050 ChimerSeq STARFusion TCGA_RNA-Seq FAM167A-CHGB FAM167A chr8 11279970 - CHGB chr20 5902981 + Exonic hg19 PCPG TCGA-P7-A5NY-01A 10 1 3'UTR-CDS Inter-chr p23.1 p12.3 42051 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 PCPG TCGA-P7-A5NY-01A 4 1 In-Frame Intra-chr p11.21 p11.21 42052 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 PCPG TCGA-P7-A5NY-01A 2 2 CDS-5'UTR Intra-chr q23 Seq+ 42053 ChimerSeq STARFusion TCGA_RNA-Seq MVP-CHGA MVP chr16 29848279 + CHGA chr14 93398715 + Exonic hg19 PCPG TCGA-P7-A5NY-01A 2 1 Out-of-frame Inter-chr p11.2 q32.12 42054 ChimerSeq STARFusion TCGA_RNA-Seq HAND2-SLC30A9 HAND2 chr4 174449886 - SLC30A9 chr4 42041003 + Exonic hg19 PCPG TCGA-SP-A6QI-01A 182 481 In-Frame Intra-chr q34.1 Transcription factor p13 Seq+ 42055 ChimerSeq STARFusion TCGA_RNA-Seq DUSP2-CHGA DUSP2 chr2 96810156 - CHGA chr14 93398852 + Exonic hg19 PCPG TCGA-SP-A6QI-01A 7 1 Out-of-frame Inter-chr q11.2 q32.12 42056 ChimerSeq STARFusion TCGA_RNA-Seq CLIC4-NCMAP CLIC4 chr1 25140710 + NCMAP chr1 24932097 + Exonic hg19 PCPG TCGA-SP-A6QI-01A 2 6 Out-of-frame Intra-chr p36.11 p36.11 42057 ChimerSeq STARFusion TCGA_RNA-Seq UBTF-MAML3 UBTF chr17 42286720 - MAML3 chr4 140812121 - Exonic hg19 PCPG TCGA-WB-A80K-01A 24 71 In-Frame Inter-chr q21.31 q31.1 Seq+ 42058 ChimerSeq STARFusion TCGA_RNA-Seq MAML3-FAM171A2 MAML3 chr4 141074014 - FAM171A2 chr17 42433956 - Exonic hg19 PCPG TCGA-WB-A80K-01A 6 53 Out-of-frame Inter-chr q31.1 q21.31 Seq+ 42059 ChimerSeq STARFusion TCGA_RNA-Seq MGRN1-RNPS1 MGRN1 chr16 4675049 + RNPS1 chr16 2314761 - Exonic hg19 PCPG TCGA-WB-A80K-01A 8 11 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 42060 ChimerSeq STARFusion TCGA_RNA-Seq USB1-CX3CL1 USB1 chr16 58048230 + CX3CL1 chr16 57413546 + Exonic hg19 PCPG TCGA-QR-A6GW-01A 5 14 Out-of-frame Intra-chr q21 q21 Seq+ 42061 ChimerSeq STARFusion TCGA_RNA-Seq APIP-S100A13 APIP chr11 34937775 - S100A13 chr1 153599009 - Exonic hg19 PCPG TCGA-RW-A686-06A 11 28 CDS-5'UTR Inter-chr p13 q21.3 Seq+ 42062 ChimerSeq STARFusion TCGA_RNA-Seq CHGA-GNAS CHGA chr14 93401565 + GNAS chr20 57485813 + Exonic hg19 PCPG TCGA-RW-A686-06A 3 39 Out-of-frame Inter-chr q32.12 q13.32 Oncogene 42063 ChimerSeq STARFusion TCGA_RNA-Seq APIP-S100A13 APIP chr11 34937775 - S100A13 chr1 153604716 - Exonic hg19 PCPG TCGA-RW-A686-06A 3 28 CDS-5'UTR Inter-chr p13 q21.3 Seq+ 42064 ChimerSeq STARFusion TCGA_RNA-Seq BPHL-MNF1 BPHL chr6 3119081 + MNF1 chr6 33665527 - Exonic hg19 PCPG TCGA-RW-A686-06A 3 22 Out-of-frame Intra-chr p25.2 42065 ChimerSeq STARFusion TCGA_RNA-Seq CHGB-TCEAL3 CHGB chr20 5903896 + TCEAL3 chrX 102883542 + Exonic hg19 PCPG TCGA-S7-A7WR-01A 4 4 Out-of-frame Inter-chr p12.3 q22.2 42066 ChimerSeq STARFusion TCGA_RNA-Seq NF1-RAB11FIP4 NF1 chr17 29541603 + RAB11FIP4 chr17 29844669 + Exonic hg19 PCPG TCGA-QR-A707-01A 2 13 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 42067 ChimerSeq STARFusion TCGA_RNA-Seq SYNPO2-METTL14 SYNPO2 chr4 119810296 + METTL14 chr4 119621705 + Exonic hg19 PCPG TCGA-QR-A707-01A 3 5 In-Frame Intra-chr q26 Tumor suppressor gene q26 Seq+ 42068 ChimerSeq STARFusion TCGA_RNA-Seq SST-CHGA SST chr3 187387045 - CHGA chr14 93401179 + Exonic hg19 PCPG TCGA-RW-A8AZ-01A 4 284 Out-of-frame Inter-chr q27.3 q32.12 42069 ChimerSeq STARFusion TCGA_RNA-Seq UBTF-MAML3 UBTF chr17 42287492 - MAML3 chr4 140812121 - Exonic hg19 PCPG TCGA-RW-A8AZ-01A 6 17 In-Frame Inter-chr q21.31 q31.1 Seq+ 42070 ChimerSeq STARFusion TCGA_RNA-Seq EML4-PKDCC EML4 chr2 42396776 + PKDCC chr2 42280379 + Exonic hg19 PCPG TCGA-RW-A8AZ-01A 4 6 Out-of-frame Intra-chr p21 Oncogene p21 Seq+ 42071 ChimerSeq STARFusion TCGA_RNA-Seq PIK3R1-GINS3 PIK3R1 chr5 67522837 + GINS3 chr16 58420525 + Exonic hg19 PCPG TCGA-W2-A7HB-01A 7 34 CDS-5'UTR Inter-chr q13.1 Oncogene q21 Seq+ 42072 ChimerSeq STARFusion TCGA_RNA-Seq ARL8B-CLASP2 ARL8B chr3 5164273 + CLASP2 chr3 33738425 - Exonic hg19 PCPG TCGA-W2-A7HB-01A 6 15 In-Frame Intra-chr p26.1 p22.3 Seq+ 42073 ChimerSeq STARFusion TCGA_RNA-Seq PAM16-PITPNM3 PAM16 chr16 4401233 - PITPNM3 chr17 6387612 - Exonic hg19 PCPG TCGA-QR-A70I-01A 6 11 Out-of-frame Inter-chr p13.3 p13.1 Seq+ 42074 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH1-DLK1 NOTCH1 chr9 139401806 - DLK1 chr14 101200693 + Exonic hg19 PCPG TCGA-QR-A70I-01A 5 1 Out-of-frame Inter-chr q34.3 Oncogene Tumor suppressor gene q32.2 Tumor suppressor gene 42075 ChimerSeq STARFusion TCGA_RNA-Seq CALR-CHGB CALR chr19 13054676 + CHGB chr20 5903917 + Exonic hg19 PCPG TCGA-QR-A70I-01A 3 2 Out-of-frame Inter-chr p13.13 p12.3 42076 ChimerSeq STARFusion TCGA_RNA-Seq KDM5B-ITPKB KDM5B chr1 202742246 - ITPKB chr1 226836472 - Exonic hg19 PCPG TCGA-WB-A81J-01A 8 33 In-Frame Intra-chr q32.1 Transcription factor q42.12 Seq+ 42077 ChimerSeq STARFusion TCGA_RNA-Seq SYT14-DISP1 SYT14 chr1 210194599 + DISP1 chr1 222997226 + Exonic hg19 PCPG TCGA-WB-A81J-01A 6 12 5'UTR-5'UTR Intra-chr q32.2 q41 42078 ChimerSeq STARFusion TCGA_RNA-Seq ARMC9-SSR2 ARMC9 chr2 232160966 + SSR2 chr1 155988159 - Exonic hg19 PCPG TCGA-WB-A81J-01A 2 17 Out-of-frame Inter-chr q37.1 q22 Seq+ 42079 ChimerSeq STARFusion TCGA_RNA-Seq RPE-PRDM5 RPE chr2 210874460 + PRDM5 chr4 121760429 - Exonic hg19 PCPG TCGA-WB-A81J-01A 2 12 Out-of-frame Inter-chr q34 q27 Tumor suppressor gene Transcription factor Seq+ 42080 ChimerSeq STARFusion TCGA_RNA-Seq NVL-C2orf72 NVL chr1 224517773 - C2orf72 chr2 231906011 + Exonic hg19 PCPG TCGA-WB-A81J-01A 2 7 Out-of-frame Inter-chr q42.11 q37.1 Seq+ 42081 ChimerSeq STARFusion TCGA_RNA-Seq LOC646214-PAK2 LOC646214 chr15 21932723 - PAK2 chr3 196559159 + Exonic hg19 PCPG TCGA-RW-A67V-01A 4 8 Out-of-frame Inter-chr q29 STE:STE20 42082 ChimerSeq STARFusion TCGA_RNA-Seq LOC646214-PAK2 LOC646214 chr15 21932716 - PAK2 chr3 196559166 + Exonic hg19 PCPG TCGA-RW-A67V-01A 3 8 Out-of-frame Inter-chr q29 STE:STE20 42083 ChimerSeq STARFusion TCGA_RNA-Seq PSIP1-TBL1X PSIP1 chr9 15486004 - TBL1X chrX 9621585 + Exonic hg19 PCPG TCGA-QT-A5XJ-01A 11 37 CDS-5'UTR Inter-chr p22.3 Oncogene p22.31 Seq+ 42084 ChimerSeq STARFusion TCGA_RNA-Seq MICAL3-PTGER3 MICAL3 chr22 18507047 - PTGER3 chr1 71318542 - Exonic hg19 PCPG TCGA-QT-A5XJ-01A 4 42 5'UTR-CDS Inter-chr q11.21 p31.1 Seq+ 42085 ChimerSeq STARFusion TCGA_RNA-Seq CCRN4L-MGST2 CCRN4L chr4 139937325 + MGST2 chr4 140599697 + Exonic hg19 PCPG TCGA-QT-A5XJ-01A 6 28 In-Frame Intra-chr q31.1 Seq+ 42086 ChimerSeq STARFusion TCGA_RNA-Seq CCRN4L-MGST2 CCRN4L chr4 139937325 + MGST2 chr4 140616351 + Exonic hg19 PCPG TCGA-QT-A5XJ-01A 4 28 Out-of-frame Intra-chr q31.1 Seq+ 42087 ChimerSeq STARFusion TCGA_RNA-Seq LOC339822-TMEM18 LOC339822 chr2 806037 - TMEM18 chr2 672862 - Exonic hg19 PCPG TCGA-QT-A5XJ-01A 3 22 3'UTR-CDS Intra-chr p25.3 42088 ChimerSeq STARFusion TCGA_RNA-Seq TRPM4-PPFIA3 TRPM4 chr19 49675365 + PPFIA3 chr19 49636258 + Exonic hg19 PCPG TCGA-QT-A5XJ-01A 4 8 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 42089 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 PCPG TCGA-QT-A5XJ-01A 2 2 In-Frame Intra-chr p11.21 p11.21 42090 ChimerSeq STARFusion TCGA_RNA-Seq DKFZp686K1684-RCN1 DKFZp686K1684 chr11 31838187 + RCN1 chr11 32118690 + Exonic hg19 PCPG TCGA-QT-A5XJ-01A 2 1 5'UTR-CDS Intra-chr p13 42091 ChimerSeq STARFusion TCGA_RNA-Seq CHGA-CROCC CHGA chr14 93398818 + CROCC chr1 17256675 + Exonic hg19 PCPG TCGA-QR-A70C-01A 5 1 Out-of-frame Inter-chr q32.12 p36.13 42092 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-CHGB RNA45S5 chrUn_gl000220 109799 + CHGB chr20 5905985 + Exonic hg19 PCPG TCGA-SP-A6QC-01A 3 27 Out-of-frame Inter-chr p12.3 42093 ChimerSeq STARFusion TCGA_RNA-Seq CCT2-CPM CCT2 chr12 69979304 + CPM chr12 69252851 - Exonic hg19 PCPG TCGA-PR-A5PF-01A 8 33 Out-of-frame Intra-chr q15 q15 Seq+ 42094 ChimerSeq STARFusion TCGA_RNA-Seq FAM134C-CHGA FAM134C chr17 40734126 - CHGA chr14 93397968 + Exonic hg19 PCPG TCGA-PR-A5PF-01A 3 1 Out-of-frame Inter-chr q32.12 42095 ChimerSeq STARFusion TCGA_RNA-Seq PIAS2-ST8SIA5 PIAS2 chr18 44407922 - ST8SIA5 chr18 44272218 - Exonic hg19 PCPG TCGA-PR-A5PF-01A 2 1 In-Frame Intra-chr q21.1 q21.1 Seq+ 42096 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-CYSTM1 ANKHD1 chr5 139781858 + CYSTM1 chr5 139661082 + Exonic hg19 PCPG TCGA-WB-A820-01A 11 11 CDS-3'UTR Intra-chr q31.3 q31.3 42097 ChimerSeq STARFusion TCGA_RNA-Seq NF1-EZH2 NF1 chr17 29592357 + EZH2 chr7 148544397 - Exonic hg19 PCPG TCGA-WB-A820-01A 8 8 CDS-5'UTR Inter-chr q11.2 Oncogene Tumor suppressor gene q36.1 Oncogene Tumor suppressor gene Seq+ 42098 ChimerSeq STARFusion TCGA_RNA-Seq BCORL1-UTP14A BCORL1 chrX 129173257 + UTP14A chrX 129041343 + Exonic hg19 PCPG TCGA-WB-A820-01A 6 4 Out-of-frame Intra-chr q26.1 Tumor suppressor gene q26.1 Seq+ 42099 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-SLC4A9 ANKHD1 chr5 139781858 + SLC4A9 chr5 139741393 + Exonic hg19 PCPG TCGA-WB-A820-01A 2 10 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 42100 ChimerSeq STARFusion TCGA_RNA-Seq HAND2-SCRG1 HAND2 chr4 174448164 - SCRG1 chr4 174312579 - Exonic hg19 PCPG TCGA-WB-A820-01A 3 5 3'UTR-5'UTR Intra-chr q34.1 Transcription factor q34.1 42101 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-FOCAD ZBTB20 chr3 114619151 - FOCAD chr9 20916892 + Exonic hg19 PCPG TCGA-RT-A6YC-01A 14 43 5'UTR-CDS Inter-chr q13.31 Transcription factor p21.3 Seq+ 42102 ChimerSeq STARFusion TCGA_RNA-Seq SORBS2-PDLIM3 SORBS2 chr4 186696381 - PDLIM3 chr4 186446325 - Exonic hg19 PCPG TCGA-RT-A6YC-01A 13 30 5'UTR-CDS Intra-chr q35.1 q35.1 Seq+ 42103 ChimerSeq STARFusion TCGA_RNA-Seq CTIF-CCDC107 CTIF chr18 46343747 + CCDC107 chr9 35658573 + Exonic hg19 PCPG TCGA-QR-A6H4-01A 3 3 Out-of-frame Inter-chr p13.3 Seq+ 42104 ChimerSeq STARFusion TCGA_RNA-Seq IRF2BP2-SP2 IRF2BP2 chr1 234744193 - SP2 chr17 46002285 + Exonic hg19 PCPG TCGA-QR-A708-01A 2 37 In-Frame Inter-chr q42.3 q21.32 Transcription factor Seq+ 42105 ChimerSeq STARFusion TCGA_RNA-Seq CCBL2-GTF2B CCBL2 chr1 89458268 - GTF2B chr1 89325969 - Exonic hg19 PCPG TCGA-QR-A708-01A 2 2 5'UTR-CDS Intra-chr p22.2 Transcription factor 42106 ChimerSeq STARFusion TCGA_RNA-Seq RBMXL1-GTF2B RBMXL1 chr1 89458268 - GTF2B chr1 89325969 - Exonic hg19 PCPG TCGA-QR-A708-01A 2 2 5'UTR-CDS Intra-chr p22.2 p22.2 Transcription factor 42107 ChimerSeq STARFusion TCGA_RNA-Seq PPIP5K1-CATSPER2 PPIP5K1 chr15 43856301 - CATSPER2 chr15 43924561 - Exonic hg19 PCPG TCGA-SR-A6MX-01A 2 8 In-Frame Intra-chr q15.3 q15.3 42108 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 PCPG TCGA-WB-A817-01A 3 5 CDS-5'UTR Intra-chr q23 Seq+ 42109 ChimerSeq STARFusion TCGA_RNA-Seq LINC01057-CNN3 LINC01057 chr1 95197814 - CNN3 chr1 95369080 - Exonic hg19 PCPG TCGA-WB-A816-01A 11 29 Out-of-frame Intra-chr p21.3 42110 ChimerSeq STARFusion TCGA_RNA-Seq DCAKD-ADAMTS7 DCAKD chr17 43128921 - ADAMTS7 chr15 79083565 - Exonic hg19 PCPG TCGA-QR-A6GS-01A 2 4 5'UTR-CDS Inter-chr q21.31 q25.1 Seq+ 42111 ChimerSeq STARFusion TCGA_RNA-Seq DCAKD-ADAMTS7 DCAKD chr17 43138256 - ADAMTS7 chr15 79083565 - Exonic hg19 PCPG TCGA-QR-A6GS-01A 2 4 5'UTR-CDS Inter-chr q21.31 q25.1 Seq+ 42112 ChimerSeq STARFusion TCGA_RNA-Seq RHOBTB1-CHGA RHOBTB1 chr10 62648412 - CHGA chr14 93399080 + Exonic hg19 PCPG TCGA-QR-A6GS-01A 3 0 Out-of-frame Inter-chr q21.2 q32.12 42113 ChimerSeq STARFusion TCGA_RNA-Seq GON4L-ARHGEF2 GON4L chr1 155823067 - ARHGEF2 chr1 155932509 - Exonic hg19 PCPG TCGA-QR-A6GS-01A 2 1 Out-of-frame Intra-chr q22 q22 Seq+ 42114 ChimerSeq STARFusion TCGA_RNA-Seq TIMM23B-LINC00843 TIMM23B chr10 51387763 + LINC00843 chr10 51732772 + Exonic hg19 PCPG TCGA-QT-A5XN-01A 19 82 Out-of-frame Intra-chr q11.23 q11.23 42115 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1737-NGFR KIAA1737 chr14 77564704 + NGFR chr17 47579425 + Exonic hg19 PCPG TCGA-QT-A5XN-01A 9 21 5'UTR-CDS Inter-chr q21.33 Tumor suppressor gene Seq+ 42116 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-PIP5K1P1 KCTD20 chr6 36457998 + PIP5K1P1 chr6 7987765 + Exonic hg19 PCPG TCGA-QT-A5XN-01A 12 0 Out-of-frame Intra-chr p21.31 p24.3 42117 ChimerSeq STARFusion TCGA_RNA-Seq DAAM1-HS6ST3 DAAM1 chr14 59655486 + HS6ST3 chr13 97408109 + Exonic hg19 PCPG TCGA-QT-A5XN-01A 3 18 5'UTR-CDS Inter-chr q23.1 q32.1 Seq+ 42118 ChimerSeq STARFusion TCGA_RNA-Seq DAAM1-HS6ST3 DAAM1 chr14 59655486 + HS6ST3 chr13 97484744 + Exonic hg19 PCPG TCGA-QT-A5XN-01A 3 18 5'UTR-CDS Inter-chr q23.1 q32.1 Seq+ 42119 ChimerSeq STARFusion TCGA_RNA-Seq TTC39A-FGGY TTC39A chr1 51787393 - FGGY chr1 59977983 + Exonic hg19 PCPG TCGA-QT-A5XN-01A 4 12 Out-of-frame Intra-chr p32.3 p32.1 Seq+ 42120 ChimerSeq STARFusion TCGA_RNA-Seq MEGF9-TTLL5 MEGF9 chr9 123476036 - TTLL5 chr14 76230958 + Exonic hg19 PCPG TCGA-QT-A5XN-01A 3 14 Out-of-frame Inter-chr q33.2 q24.3 Seq+ 42121 ChimerSeq STARFusion TCGA_RNA-Seq CALR-CHGB CALR chr19 13054676 + CHGB chr20 5903917 + Exonic hg19 PCPG TCGA-QT-A5XN-01A 3 7 Out-of-frame Inter-chr p13.13 p12.3 42122 ChimerSeq STARFusion TCGA_RNA-Seq CCBL2-GTF2B CCBL2 chr1 89458268 - GTF2B chr1 89325969 - Exonic hg19 PCPG TCGA-RW-A68F-01A 6 18 5'UTR-CDS Intra-chr p22.2 Transcription factor 42123 ChimerSeq STARFusion TCGA_RNA-Seq RBMXL1-GTF2B RBMXL1 chr1 89458268 - GTF2B chr1 89325969 - Exonic hg19 PCPG TCGA-RW-A68F-01A 6 18 5'UTR-CDS Intra-chr p22.2 p22.2 Transcription factor 42124 ChimerSeq STARFusion TCGA_RNA-Seq HTATSF1-BRS3 HTATSF1 chrX 135586622 + BRS3 chrX 135572292 + Exonic hg19 PCPG TCGA-QR-A6GZ-01A 2 28 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 42125 ChimerSeq STARFusion TCGA_RNA-Seq AP3D1-SLC6A8 AP3D1 chr19 2101455 - SLC6A8 chrX 152961595 + Exonic hg19 PCPG TCGA-QR-A6GZ-01A 6 0 Out-of-frame Inter-chr p13.3 q28 42126 ChimerSeq STARFusion TCGA_RNA-Seq PPIP5K1-CATSPER2 PPIP5K1 chr15 43856301 - CATSPER2 chr15 43924561 - Exonic hg19 PCPG TCGA-QR-A6H1-01A 2 8 In-Frame Intra-chr q15.3 q15.3 42127 ChimerSeq STARFusion TCGA_RNA-Seq UBTF-MAML3 UBTF chr17 42286720 - MAML3 chr4 140812121 - Exonic hg19 PCPG TCGA-PR-A5PH-01A 8 21 In-Frame Inter-chr q21.31 q31.1 Seq+ 42128 ChimerSeq STARFusion TCGA_RNA-Seq CC2D1A-ZSWIM4 CC2D1A chr19 14038078 + ZSWIM4 chr19 13939459 + Exonic hg19 PCPG TCGA-PR-A5PH-01A 4 19 In-Frame Intra-chr p13.12 Transcription factor p13.13 Seq+ 42129 ChimerSeq STARFusion TCGA_RNA-Seq PHOX2A-CLPB PHOX2A chr11 71952146 - CLPB chr11 72070052 - Exonic hg19 PCPG TCGA-PR-A5PH-01A 3 3 Out-of-frame Intra-chr q13.4 Tumor suppressor gene Transcription factor q13.4 Seq+ 42130 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-CHMP1A CPSF6 chr12 69656342 + CHMP1A chr16 89713739 - Exonic hg19 PCPG TCGA-PR-A5PH-01A 3 1 3'UTR-3'UTR Inter-chr q15 q24.3 Seq+ 42131 ChimerSeq STARFusion TCGA_RNA-Seq PELO-B2M PELO chr5 52096813 + B2M chr15 45007623 + Exonic hg19 PCPG TCGA-PR-A5PH-01A 3 1 Out-of-frame Inter-chr q11.2 Oncogene 42132 ChimerSeq STARFusion TCGA_RNA-Seq IRF2BP2-SP2 IRF2BP2 chr1 234744415 - SP2 chr17 46002282 + Exonic hg19 PCPG TCGA-QR-A700-01A 20 227 Out-of-frame Inter-chr q42.3 q21.32 Transcription factor Seq+ 42133 ChimerSeq STARFusion TCGA_RNA-Seq FAM160B1-ADK FAM160B1 chr10 116593161 + ADK chr10 76349040 + Exonic hg19 PCPG TCGA-WB-A81S-01A 26 70 In-Frame Intra-chr q25.3 q22.2 Seq+ 42134 ChimerSeq STARFusion TCGA_RNA-Seq TRIP12-SLC16A14 TRIP12 chr2 230723488 - SLC16A14 chr2 230902247 - Exonic hg19 PCPG TCGA-WB-A81S-01A 7 24 In-Frame Intra-chr q36.3 q36.3 Seq+ 42135 ChimerSeq STARFusion TCGA_RNA-Seq ARID3B-LOC440288 ARID3B chr15 74836829 + LOC440288 chr15 74771401 + Exonic hg19 PCPG TCGA-WB-A81S-01A 4 3 CDS-5'UTR Intra-chr q24.1 Transcription factor 42136 ChimerSeq STARFusion TCGA_RNA-Seq ATP9B-CHGB ATP9B chr18 77134093 + CHGB chr20 5903356 + Exonic hg19 PCPG TCGA-WB-A81S-01A 4 1 Out-of-frame Inter-chr p12.3 42137 ChimerSeq STARFusion TCGA_RNA-Seq MTATP6P1-CHGA MTATP6P1 chr1 569608 + CHGA chr14 93401366 + Exonic hg19 PCPG TCGA-QR-A70H-01A 3 20 Out-of-frame Inter-chr p36.33 q32.12 42138 ChimerSeq STARFusion TCGA_RNA-Seq UBTF-MAML3 UBTF chr17 42286720 - MAML3 chr4 140812121 - Exonic hg19 PCPG TCGA-QR-A70H-01A 4 11 In-Frame Inter-chr q21.31 q31.1 Seq+ 42139 ChimerSeq STARFusion TCGA_RNA-Seq NAIP-OCLN NAIP chr5 70269956 - OCLN chr5 68830521 + Exonic hg19 PCPG TCGA-QR-A70H-01A 2 6 Out-of-frame Intra-chr q13.2 q13.2 42140 ChimerSeq STARFusion TCGA_RNA-Seq VSTM2L-CTNNBL1 VSTM2L chr20 36561991 + CTNNBL1 chr20 36468504 + Exonic hg19 PCPG TCGA-QR-A70A-01A 2 4 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 42141 ChimerSeq STARFusion TCGA_RNA-Seq LOC339822-TMEM18 LOC339822 chr2 806037 - TMEM18 chr2 675630 - Exonic hg19 PCPG TCGA-QR-A705-01A 2 2 3'UTR-CDS Intra-chr p25.3 42142 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 PCPG TCGA-QR-A70P-01A 3 0 In-Frame Intra-chr p11.21 p11.21 42143 ChimerSeq STARFusion TCGA_RNA-Seq KDM6B-TMEM74B KDM6B chr17 7743342 + TMEM74B chr20 1162231 - Exonic hg19 PCPG TCGA-QR-A70P-01A 2 0 5'UTR-CDS Inter-chr p13.1 p13 42144 ChimerSeq STARFusion TCGA_RNA-Seq CHGB-CRH CHGB chr20 5903317 + CRH chr8 67090636 - Exonic hg19 PCPG TCGA-WB-A81I-01A 3 25 Out-of-frame Inter-chr p12.3 q13.1 42145 ChimerSeq STARFusion TCGA_RNA-Seq IGF2-ASCL2 IGF2 chr11 2151455 - ASCL2 chr11 2291819 - Exonic hg19 PCPG TCGA-P8-A5KC-01A 242 485 Out-of-frame Intra-chr p15.5 Oncogene p15.5 Transcription factor Seq+ 42146 ChimerSeq STARFusion TCGA_RNA-Seq ADCYAP1R1-GHRHR ADCYAP1R1 chr7 31139824 + GHRHR chr7 31014586 + Exonic hg19 PCPG TCGA-P8-A5KC-01A 5 25 In-Frame Intra-chr p14.3 p14.3 Seq+ 42147 ChimerSeq STARFusion TCGA_RNA-Seq UBTF-MAML3 UBTF chr17 42287492 - MAML3 chr4 140812121 - Exonic hg19 PCPG TCGA-P8-A5KC-01A 4 17 In-Frame Inter-chr q21.31 q31.1 Seq+ 42148 ChimerSeq STARFusion TCGA_RNA-Seq ADCYAP1R1-GHRHR ADCYAP1R1 chr7 31132349 + GHRHR chr7 31014586 + Exonic hg19 PCPG TCGA-P8-A5KC-01A 2 23 In-Frame Intra-chr p14.3 p14.3 Seq+ 42149 ChimerSeq STARFusion TCGA_RNA-Seq SMG6-CHGA SMG6 chr17 1964449 - CHGA chr14 93397650 + Exonic hg19 PCPG TCGA-P8-A5KC-01A 4 2 Out-of-frame Inter-chr p13.3 q32.12 42150 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1614-XPR1 KIAA1614 chr1 180897709 + XPR1 chr1 180793889 + Exonic hg19 PCPG TCGA-S7-A7WL-01A 14 38 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 42151 ChimerSeq STARFusion TCGA_RNA-Seq CHGA-MTATP6P1 CHGA chr14 93401402 + MTATP6P1 chr1 569341 + Exonic hg19 PCPG TCGA-S7-A7WL-01A 3 16 Out-of-frame Inter-chr q32.12 p36.33 42152 ChimerSeq STARFusion TCGA_RNA-Seq HAND2-SCRG1 HAND2 chr4 174448164 - SCRG1 chr4 174312579 - Exonic hg19 PCPG TCGA-S7-A7WL-01A 3 9 3'UTR-5'UTR Intra-chr q34.1 Transcription factor q34.1 42153 ChimerSeq STARFusion TCGA_RNA-Seq ZNF91-ASF1B ZNF91 chr19 23578127 - ASF1B chr19 14232520 - Exonic hg19 PCPG TCGA-S7-A7WP-01A 14 42 In-Frame Intra-chr p12 Transcription factor p13.12 Seq+ 42154 ChimerSeq STARFusion TCGA_RNA-Seq C12orf60-PDE6H C12orf60 chr12 14956685 + PDE6H chr12 15130906 + Exonic hg19 PCPG TCGA-S7-A7WP-01A 5 34 5'UTR-5'UTR Intra-chr p12.3 p12.3 42155 ChimerSeq STARFusion TCGA_RNA-Seq CYP17A1-MTATP6P1 CYP17A1 chr10 104590387 - MTATP6P1 chr1 569368 + Exonic hg19 PCPG TCGA-TT-A6YO-01A 3 16 Out-of-frame Inter-chr q24.32 p36.33 Seq+ 42156 ChimerSeq STARFusion TCGA_RNA-Seq CHGA-PENK CHGA chr14 93398839 + PENK chr8 57354105 - Exonic hg19 PCPG TCGA-QR-A702-01A 3 218 Out-of-frame Inter-chr q32.12 q12.1 42157 ChimerSeq STARFusion TCGA_RNA-Seq ATP9B-CHGB ATP9B chr18 77134093 + CHGB chr20 5903356 + Exonic hg19 PCPG TCGA-QR-A702-01A 3 1 Out-of-frame Inter-chr p12.3 42158 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 PCPG TCGA-QR-A70E-01A 3 3 CDS-5'UTR Intra-chr q23 Seq+ 42159 ChimerSeq STARFusion TCGA_RNA-Seq DLK1-C1QB DLK1 chr14 101198516 + C1QB chr1 22987904 + Exonic hg19 PCPG TCGA-P7-A5NY-05A 3 1 Out-of-frame Inter-chr q32.2 Tumor suppressor gene p36.12 42160 ChimerSeq STARFusion TCGA_RNA-Seq CALR-CHGB CALR chr19 13054676 + CHGB chr20 5903917 + Exonic hg19 PCPG TCGA-W2-A7HA-01B 3 8 Out-of-frame Inter-chr p13.13 p12.3 42161 ChimerSeq STARFusion TCGA_RNA-Seq SPIRE1-PTPN2 SPIRE1 chr18 12493071 - PTPN2 chr18 12794484 - Exonic hg19 PCPG TCGA-RW-A67Y-01A 8 21 Out-of-frame Intra-chr p11.21 p11.21 Tumor suppressor gene Seq+ 42162 ChimerSeq STARFusion TCGA_RNA-Seq SPIN1-NXNL2 SPIN1 chr9 91003453 + NXNL2 chr9 91190002 + Exonic hg19 PCPG TCGA-RW-A67Y-01A 2 4 5'UTR-3'UTR Intra-chr q22.1 q22.1 42163 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB4-RARA ZBTB4 chr17 7365738 - RARA chr17 38487109 + Exonic hg19 PCPG TCGA-WB-A81E-01A 4 18 CDS-5'UTR Intra-chr Tumor suppressor gene Transcription factor q21.2 Oncogene Transcription factor Seq+ 42164 ChimerSeq STARFusion TCGA_RNA-Seq LOC100507266-MSX1 LOC100507266 chr4 4651269 + MSX1 chr4 4864428 + Exonic hg19 PCPG TCGA-WB-A81E-01A 2 3 5'UTR-CDS Intra-chr p16.2 Transcription factor 42165 ChimerSeq STARFusion TCGA_RNA-Seq TRAF3-ITPK1 TRAF3 chr14 103342862 + ITPK1 chr14 93424711 - Exonic hg19 PCPG TCGA-S7-A7WM-01A 42 126 In-Frame Intra-chr q32.32 Seq+ 42166 ChimerSeq STARFusion TCGA_RNA-Seq AHDC1-ST3GAL3 AHDC1 chr1 27861273 - ST3GAL3 chr1 44363907 + Exonic hg19 PCPG TCGA-S7-A7WM-01A 4 9 3'UTR-CDS Intra-chr p35.3 Transcription factor p34.1 Seq+ 42167 ChimerSeq STARFusion TCGA_RNA-Seq SEZ6L-POMGNT1 SEZ6L chr22 26709868 + POMGNT1 chr1 46663543 - Exonic hg19 PCPG TCGA-S7-A7WM-01A 2 3 CDS-5'UTR Inter-chr q12.1 p34.1 Seq+ 42168 ChimerSeq STARFusion TCGA_RNA-Seq PUM2-MIPOL1 PUM2 chr2 20507739 - MIPOL1 chr14 37969113 + Exonic hg19 PCPG TCGA-QT-A5XP-01A 4 17 Out-of-frame Inter-chr p24.1 q13.3 Seq+ 42169 ChimerSeq STARFusion TCGA_RNA-Seq PUM2-MIPOL1 PUM2 chr2 20507739 - MIPOL1 chr14 38016110 + Exonic hg19 PCPG TCGA-QT-A5XP-01A 2 17 Out-of-frame Inter-chr p24.1 q13.3 Seq+ 42170 ChimerSeq STARFusion TCGA_RNA-Seq MAST2-OMA1 MAST2 chr1 46425149 + OMA1 chr1 58946846 - Exonic hg19 PCPG TCGA-QR-A6H2-01A 4 13 Out-of-frame Intra-chr p34.1 AGC:MAST p32.1 Seq+ 42171 ChimerSeq STARFusion TCGA_RNA-Seq CALR-CHGB CALR chr19 13054676 + CHGB chr20 5903917 + Exonic hg19 PCPG TCGA-QR-A6H2-01A 3 10 Out-of-frame Inter-chr p13.13 p12.3 42172 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-ZADH2 CPSF6 chr12 69656342 + ZADH2 chr18 72914295 - Exonic hg19 PCPG TCGA-SR-A6MZ-01A 2 0 3'UTR-CDS Inter-chr q15 q22.3 42173 ChimerSeq STARFusion TCGA_RNA-Seq EML1-MEG3 EML1 chr14 100363631 + MEG3 chr14 101311795 + Exonic hg19 PCPG TCGA-QR-A70J-01A 44 130 CDS-5'UTR Intra-chr q32.2 q32.2 Tumor suppressor gene Seq+ 42174 ChimerSeq STARFusion TCGA_RNA-Seq SUGT1-NOL6 SUGT1 chr13 53237247 + NOL6 chr9 33472410 - Exonic hg19 PCPG TCGA-W2-A7H7-01A 2 1 In-Frame Inter-chr q14.3 p13.3 42175 ChimerSeq STARFusion TCGA_RNA-Seq FAM167A-CHGB FAM167A chr8 11279970 - CHGB chr20 5902981 + Exonic hg19 PCPG TCGA-WB-A814-01A 3 1 3'UTR-CDS Inter-chr p23.1 p12.3 42176 ChimerSeq STARFusion TCGA_RNA-Seq SUGT1-NOL6 SUGT1 chr13 53237247 + NOL6 chr9 33472410 - Exonic hg19 PCPG TCGA-WB-A814-01A 2 1 In-Frame Inter-chr q14.3 p13.3 42177 ChimerSeq STARFusion TCGA_RNA-Seq STK4-PI3 STK4 chr20 43653771 + PI3 chr20 43804502 + Exonic hg19 PCPG TCGA-S7-A7WQ-01A 2 0 Out-of-frame Intra-chr q13.12 q13.12 42178 ChimerSeq STARFusion TCGA_RNA-Seq GFRA3-TTC8 GFRA3 chr5 137588976 - TTC8 chr14 89341370 + Exonic hg19 PCPG TCGA-TT-A6YN-01A 76 690 In-Frame Inter-chr q31.2 q31.3 Seq+ 42179 ChimerSeq STARFusion TCGA_RNA-Seq GFRA3-TTC8 GFRA3 chr5 137589455 - TTC8 chr14 89341370 + Exonic hg19 PCPG TCGA-TT-A6YN-01A 63 690 Out-of-frame Inter-chr q31.2 q31.3 Seq+ 42180 ChimerSeq STARFusion TCGA_RNA-Seq GFRA3-TTC8 GFRA3 chr5 137589455 - TTC8 chr14 89343638 + Exonic hg19 PCPG TCGA-TT-A6YN-01A 25 690 Out-of-frame Inter-chr q31.2 q31.3 Seq+ 42181 ChimerSeq STARFusion TCGA_RNA-Seq GFRA3-TTC8 GFRA3 chr5 137588976 - TTC8 chr14 89343638 + Exonic hg19 PCPG TCGA-TT-A6YN-01A 15 690 In-Frame Inter-chr q31.2 q31.3 Seq+ 42182 ChimerSeq STARFusion TCGA_RNA-Seq GFRA3-TTC8 GFRA3 chr5 137593328 - TTC8 chr14 89343638 + Exonic hg19 PCPG TCGA-TT-A6YN-01A 11 690 Out-of-frame Inter-chr q31.2 q31.3 Seq+ 42183 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6A-LIX1L TNRC6A chr16 24809287 + LIX1L chr1 145492235 + Exonic hg19 PCPG TCGA-TT-A6YN-01A 14 25 Out-of-frame Inter-chr p12.1 q21.1 Seq+ 42184 ChimerSeq STARFusion TCGA_RNA-Seq SPSB4-ACPL2 SPSB4 chr3 140785640 + ACPL2 chr3 140978965 + Exonic hg19 PCPG TCGA-TT-A6YN-01A 2 2 CDS-5'UTR Intra-chr q23 Seq+ 42185 ChimerSeq STARFusion TCGA_RNA-Seq CHGA-DLK1 CHGA chr14 93399075 + DLK1 chr14 101201217 + Exonic hg19 PCPG TCGA-WB-A81M-01A 3 65 Out-of-frame Intra-chr q32.12 q32.2 Tumor suppressor gene 42186 ChimerSeq STARFusion TCGA_RNA-Seq PPIP5K1-CATSPER2 PPIP5K1 chr15 43856301 - CATSPER2 chr15 43939665 - Exonic hg19 PCPG TCGA-WB-A81A-01A 2 11 In-Frame Intra-chr q15.3 q15.3 42187 ChimerSeq STARFusion TCGA_RNA-Seq GALK2-FGF7 GALK2 chr15 49612002 + FGF7 chr15 49775348 + Exonic hg19 PCPG TCGA-QR-A6GO-01A 3 10 Out-of-frame Intra-chr q21.1 q21.2 42188 ChimerSeq STARFusion TCGA_RNA-Seq C12orf60-PDE6H C12orf60 chr12 14956685 + PDE6H chr12 15130906 + Exonic hg19 PCPG TCGA-QR-A6GO-01A 2 4 5'UTR-5'UTR Intra-chr p12.3 p12.3 42189 ChimerSeq STARFusion TCGA_RNA-Seq CHGA-TBCA CHGA chr14 93390590 + TBCA chr5 77004172 - Exonic hg19 PCPG TCGA-TT-A6YJ-01A 2 1 Out-of-frame Inter-chr q32.12 q14.1 42190 ChimerSeq STARFusion TCGA_RNA-Seq EML6-SPTBN1 EML6 chr2 54952395 + SPTBN1 chr2 54893052 + Exonic hg19 PCPG TCGA-SR-A6MY-01A 4 41 In-Frame Intra-chr p16.1 p16.2 Tumor suppressor gene Seq+ 42191 ChimerSeq STARFusion TCGA_RNA-Seq NPY-CHGA NPY chr7 24323872 + CHGA chr14 93401361 + Exonic hg19 PCPG TCGA-SR-A6MY-01A 3 27 Out-of-frame Inter-chr p15.3 q32.12 42192 ChimerSeq STARFusion TCGA_RNA-Seq ATP9B-CHGB ATP9B chr18 77134094 + CHGB chr20 5903357 + Exonic hg19 PCPG TCGA-SR-A6MY-01A 3 1 Out-of-frame Inter-chr p12.3 42193 ChimerSeq STARFusion TCGA_RNA-Seq DLK1-C1QB DLK1 chr14 101198516 + C1QB chr1 22987904 + Exonic hg19 PCPG TCGA-TT-A6YP-01A 3 1 Out-of-frame Inter-chr q32.2 Tumor suppressor gene p36.12 42194 ChimerSeq STARFusion TCGA_RNA-Seq RGAG4-CHGA RGAG4 chrX 71350162 - CHGA chr14 93398783 + Exonic hg19 PCPG TCGA-TT-A6YP-01A 3 1 Out-of-frame Inter-chr q32.12 42195 ChimerSeq STARFusion TCGA_RNA-Seq EZH1-PDSS2 EZH1 chr17 40879653 - PDSS2 chr6 107595431 - Exonic hg19 PCPG TCGA-WB-A81F-01A 8 21 Out-of-frame Inter-chr q21.2 Tumor suppressor gene q21 Tumor suppressor gene Seq+ 42196 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-ABRACL FBXL20 chr17 37499433 - ABRACL chr6 139355292 + Exonic hg19 PCPG TCGA-WB-A81F-01A 4 21 CDS-5'UTR Inter-chr q12 q24.1 Seq+ 42197 ChimerSeq STARFusion TCGA_RNA-Seq OPRD1-PTP4A2 OPRD1 chr1 29139122 + PTP4A2 chr1 32385259 - Exonic hg19 PCPG TCGA-WB-A81F-01A 4 9 CDS-5'UTR Intra-chr p35.3 p35.2 Seq+ 42198 ChimerSeq STARFusion TCGA_RNA-Seq PPIP5K1-CATSPER2 PPIP5K1 chr15 43856301 - CATSPER2 chr15 43939665 - Exonic hg19 PCPG TCGA-WB-A81F-01A 2 14 In-Frame Intra-chr q15.3 q15.3 42199 ChimerSeq STARFusion TCGA_RNA-Seq MEG3-GNAS MEG3 chr14 101292554 + GNAS chr20 57470667 + Exonic hg19 PCPG TCGA-WB-A81F-01A 2 2 5'UTR-5'UTR Inter-chr q32.2 Tumor suppressor gene q13.32 Oncogene 42200 ChimerSeq STARFusion TCGA_RNA-Seq SEPT6-RPL39 SEPT6 chrX 118763281 - RPL39 chrX 118923974 - Exonic hg19 PCPG TCGA-QT-A5XO-01A 32 148 Out-of-frame Intra-chr q24 q24 Seq+ 42201 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-CYB5B NFAT5 chr16 69600277 + CYB5B chr16 69481053 + Exonic hg19 PCPG TCGA-QT-A5XO-01A 28 118 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 42202 ChimerSeq STARFusion TCGA_RNA-Seq CREB5-APH1A CREB5 chr7 28763949 + APH1A chr1 150241729 - Exonic hg19 PCPG TCGA-QT-A5XO-01A 31 76 CDS-5'UTR Inter-chr p15.1 Transcription factor q21.2 Seq+ 42203 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-CYB5B NFAT5 chr16 69602451 + CYB5B chr16 69481053 + Exonic hg19 PCPG TCGA-QT-A5XO-01A 11 118 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 42204 ChimerSeq STARFusion TCGA_RNA-Seq TIMM23B-LINC00843 TIMM23B chr10 51387763 + LINC00843 chr10 51732772 + Exonic hg19 PCPG TCGA-QT-A5XO-01A 14 59 Out-of-frame Intra-chr q11.23 q11.23 42205 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN9-FGD4 TSPAN9 chr12 3310422 + FGD4 chr12 32797528 + Exonic hg19 PCPG TCGA-QT-A5XO-01A 9 72 CDS-3'UTR Intra-chr p13.33 p11.21 Seq+ 42206 ChimerSeq STARFusion TCGA_RNA-Seq PENK-CHGB PENK chr8 57354194 - CHGB chr20 5903946 + Exonic hg19 PCPG TCGA-QT-A5XO-01A 3 67 Out-of-frame Inter-chr q12.1 p12.3 42207 ChimerSeq STARFusion TCGA_RNA-Seq SEPT6-IFLTD1 SEPT6 chrX 118763281 - IFLTD1 chr12 25562376 - Exonic hg19 PCPG TCGA-QT-A5XO-01A 9 19 CDS-3'UTR Inter-chr q24 Tumor suppressor gene 42208 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H13-CHGA ZC3H13 chr13 46562994 - CHGA chr14 93396061 + Exonic hg19 PCPG TCGA-QT-A5XO-01A 13 1 Out-of-frame Inter-chr q14.13 q32.12 42209 ChimerSeq STARFusion TCGA_RNA-Seq CHGB-TCEAL3 CHGB chr20 5903882 + TCEAL3 chrX 102883542 + Exonic hg19 PCPG TCGA-QT-A5XO-01A 9 4 Out-of-frame Inter-chr p12.3 q22.2 42210 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP35-PGPEP1L ARHGAP35 chr19 47440665 + PGPEP1L chr15 99512880 - Exonic hg19 PCPG TCGA-QT-A5XO-01A 3 26 Out-of-frame Inter-chr q13.32 Transcription factor q26.3 Seq+ 42211 ChimerSeq STARFusion TCGA_RNA-Seq SEPT6-ZNF808 SEPT6 chrX 118763281 - ZNF808 chr19 53067332 + Exonic hg19 PCPG TCGA-QT-A5XO-01A 8 4 CDS-3'UTR Inter-chr q24 q13.41 Transcription factor 42212 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP35-PGPEP1L ARHGAP35 chr19 47440665 + PGPEP1L chr15 99514387 - Exonic hg19 PCPG TCGA-QT-A5XO-01A 2 26 Out-of-frame Inter-chr q13.32 Transcription factor q26.3 Seq+ 42213 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN9-DNM1L TSPAN9 chr12 3310422 + DNM1L chr12 32854349 + Exonic hg19 PCPG TCGA-QT-A5XO-01A 3 19 In-Frame Intra-chr p13.33 p11.21 Seq+ 42214 ChimerSeq STARFusion TCGA_RNA-Seq NBEA-COLGALT2 NBEA chr13 36046673 + COLGALT2 chr1 183947654 - Exonic hg19 PCPG TCGA-QT-A5XO-01A 3 10 Out-of-frame Inter-chr q13.3 q25.3 Seq+ 42215 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A13-SH2D3C SLC25A13 chr7 95813589 - SH2D3C chr9 130504238 - Exonic hg19 PCPG TCGA-QT-A5XO-01A 2 10 Out-of-frame Inter-chr q21.3 q34.11 Seq+ 42216 ChimerSeq STARFusion TCGA_RNA-Seq CHGB-PENK CHGB chr20 5904003 + PENK chr8 57354090 - Exonic hg19 PCPG TCGA-WB-A80Y-01A 3 83 Out-of-frame Inter-chr p12.3 q12.1 42217 ChimerSeq STARFusion TCGA_RNA-Seq TCF4-MAML3 TCF4 chr18 52921728 - MAML3 chr4 140812121 - Exonic hg19 PCPG TCGA-WB-A80Y-01A 11 38 In-Frame Inter-chr q21.2 Tumor suppressor gene Transcription factor q31.1 Seq+ 42218 ChimerSeq STARFusion TCGA_RNA-Seq LINC01057-CNN3 LINC01057 chr1 95197814 - CNN3 chr1 95369080 - Exonic hg19 PCPG TCGA-WB-A80Y-01A 9 30 Out-of-frame Intra-chr p21.3 42219 ChimerSeq STARFusion TCGA_RNA-Seq LINC01057-CNN3 LINC01057 chr1 95285512 - CNN3 chr1 95369080 - Exonic hg19 PCPG TCGA-WB-A80Y-01A 3 30 Out-of-frame Intra-chr p21.3 42220 ChimerSeq STARFusion TCGA_RNA-Seq DIRAS2-LOC340515 DIRAS2 chr9 93405034 - LOC340515 chr9 93271223 - Exonic hg19 PCPG TCGA-QR-A70U-01A 2 0 5'UTR-3'UTR Intra-chr q22.2 42221 ChimerSeq STARFusion TCGA_RNA-Seq AMPD3-ANKH AMPD3 chr11 10523137 + ANKH chr5 14711419 - Exonic hg19 PCPG TCGA-WB-A81H-01A 15 39 In-Frame Inter-chr p15.4 p15.2 Seq+ 42222 ChimerSeq STARFusion TCGA_RNA-Seq GDAP1-FLJ39080 GDAP1 chr8 75275288 + FLJ39080 chr8 75525088 + Exonic hg19 PCPG TCGA-W2-A7HF-01A 2 1 5'UTR-5'UTR Intra-chr q21.11 42223 ChimerSeq STARFusion TCGA_RNA-Seq CHGA-LOC100129034 CHGA chr14 93397804 + LOC100129034 chr9 127118024 + Exonic hg19 PCPG TCGA-RW-A68C-01A 3 1 Out-of-frame Inter-chr q32.12 42224 ChimerSeq STARFusion TCGA_RNA-Seq CYYR1-APP CYYR1 chr21 27938585 - APP chr21 27484463 - Exonic hg19 PCPG TCGA-RW-A68C-01A 2 1 Out-of-frame Intra-chr q21.3 q21.3 42225 ChimerSeq STARFusion TCGA_RNA-Seq ATP9B-CHGB ATP9B chr18 77134093 + CHGB chr20 5903356 + Exonic hg19 PCPG TCGA-QT-A5XK-01A 3 1 Out-of-frame Inter-chr p12.3 42226 ChimerSeq STARFusion TCGA_RNA-Seq TECTA-FOXN3 TECTA chr11 121000920 + FOXN3 chr14 89629313 - Exonic hg19 PCPG TCGA-RW-A688-01A 2 3 Out-of-frame Inter-chr q23.3 q32.11 Transcription factor Seq+ 42227 ChimerSeq STARFusion TCGA_RNA-Seq PPIP5K1-CATSPER2 PPIP5K1 chr15 43856301 - CATSPER2 chr15 43939665 - Exonic hg19 PCPG TCGA-QT-A5XL-01A 2 6 In-Frame Intra-chr q15.3 q15.3 42228 ChimerSeq STARFusion TCGA_RNA-Seq DLK1-C1QB DLK1 chr14 101198516 + C1QB chr1 22987904 + Exonic hg19 PCPG TCGA-QT-A5XL-01A 3 1 Out-of-frame Inter-chr q32.2 Tumor suppressor gene p36.12 42229 ChimerSeq STARFusion TCGA_RNA-Seq C12orf60-PDE6H C12orf60 chr12 14956685 + PDE6H chr12 15130906 + Exonic hg19 PCPG TCGA-WB-A81K-01A 2 6 5'UTR-5'UTR Intra-chr p12.3 p12.3 42230 ChimerSeq STARFusion TCGA_RNA-Seq DBH-SCG5 DBH chr9 136501832 + SCG5 chr15 32988715 + Exonic hg19 PCPG TCGA-WB-A81K-01A 2 2 In-Frame Inter-chr q34.2 42231 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010681 - TTC18 chr10 75016173 - Exonic hg19 PCPG TCGA-WB-A80M-01A 43 196 Out-of-frame Intra-chr q22.2 42232 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75011521 - TTC18 chr10 75016174 - Exonic hg19 PCPG TCGA-WB-A80M-01A 28 188 Out-of-frame Intra-chr q22.2 42233 ChimerSeq STARFusion TCGA_RNA-Seq KDM4B-PHYHIPL KDM4B chr19 5082515 + PHYHIPL chr10 61004817 + Exonic hg19 PCPG TCGA-WB-A80M-01A 34 122 Out-of-frame Inter-chr p13.3 q21.1 Seq+ 42234 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010596 - TTC18 chr10 75016174 - Exonic hg19 PCPG TCGA-WB-A80M-01A 13 188 3'UTR-CDS Intra-chr q22.2 42235 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010573 - TTC18 chr10 75016174 - Exonic hg19 PCPG TCGA-WB-A80M-01A 11 188 3'UTR-CDS Intra-chr q22.2 42236 ChimerSeq STARFusion TCGA_RNA-Seq RNF216-RSPH10B2 RNF216 chr7 5778907 - RSPH10B2 chr7 6837994 + Exonic hg19 PCPG TCGA-W2-A7HD-01A 9 49 CDS-5'UTR Intra-chr p22.1 p22.1 Seq+ 42237 ChimerSeq STARFusion TCGA_RNA-Seq DYNC1LI1-MRPS11 DYNC1LI1 chr3 32582529 - MRPS11 chr15 89020220 + Exonic hg19 PRAD TCGA-G9-6354 18 69 In-Frame Inter-chr p22.3 q25.3 Seq+ 42238 ChimerSeq STARFusion TCGA_RNA-Seq ATXN2-TRIM37 ATXN2 chr12 111923075 - TRIM37 chr17 57079075 - Exonic hg19 PRAD TCGA-G9-6354 4 31 In-Frame Inter-chr q24.12 q22 Seq+ 42239 ChimerSeq STARFusion TCGA_RNA-Seq ATXN2-TRIM37 ATXN2 chr12 111923069 - TRIM37 chr17 57076820 - Exonic hg19 PRAD TCGA-G9-6354 3 31 Out-of-frame Inter-chr q24.12 q22 Seq+ 42240 ChimerSeq STARFusion TCGA_RNA-Seq ATXN2-TRIM37 ATXN2 chr12 111923075 - TRIM37 chr17 57079102 - Exonic hg19 PRAD TCGA-G9-6354 2 31 Out-of-frame Inter-chr q24.12 q22 Seq+ 42241 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649522 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-G9-6351 36 193 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 42242 ChimerSeq STARFusion TCGA_RNA-Seq USP45-RIOK1 USP45 chr6 99956486 - RIOK1 chr6 7417564 + Exonic hg19 PRAD TCGA-G9-6351 7 46 In-Frame Intra-chr q16.2 p24.3 Atypical:RIO Seq+ 42243 ChimerSeq STARFusion TCGA_RNA-Seq NINL-NAA20 NINL chr20 25507044 - NAA20 chr20 20007428 + Exonic hg19 PRAD TCGA-G9-6351 8 22 Out-of-frame Intra-chr p11.21 p11.23 Seq+ 42244 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-HOXA1 TTC6 chr14 38065213 + HOXA1 chr7 27134974 - Exonic hg19 PRAD TCGA-YL-A9WH 28 79 Out-of-frame Inter-chr q21.1 p15.2 Transcription factor Seq+ 42245 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-HOXA1 TTC6 chr14 38065213 + HOXA1 chr7 27134414 - Exonic hg19 PRAD TCGA-YL-A9WH 13 79 Out-of-frame Inter-chr q21.1 p15.2 Transcription factor Seq+ 42246 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-HOXA1 TTC6 chr14 38065213 + HOXA1 chr7 27135591 - Exonic hg19 PRAD TCGA-YL-A9WH 4 79 Out-of-frame Inter-chr q21.1 p15.2 Transcription factor Seq+ 42247 ChimerSeq STARFusion TCGA_RNA-Seq HERC1-SNX6 HERC1 chr15 64126026 - SNX6 chr14 35032381 - Exonic hg19 PRAD TCGA-YL-A9WH 3 30 5'UTR-CDS Inter-chr q22.31 q13.1 Seq+ 42248 ChimerSeq STARFusion TCGA_RNA-Seq TNKS2-HECTD2 TNKS2 chr10 93602148 + HECTD2 chr10 93220184 + Exonic hg19 PRAD TCGA-YL-A9WH 4 17 In-Frame Intra-chr q23.32 q23.32 Seq+ 42249 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC13-ACPP DNAJC13 chr3 132136604 + ACPP chr3 132047111 + Exonic hg19 PRAD TCGA-YL-A9WH 4 10 5'UTR-5'UTR Intra-chr q22.1 q22.1 42250 ChimerSeq STARFusion TCGA_RNA-Seq TXNIP-CCDC148 TXNIP chr1 145440140 + CCDC148 chr2 159145348 - Exonic hg19 PRAD TCGA-YL-A9WH 4 4 Out-of-frame Inter-chr q21.1 Tumor suppressor gene q24.1 42251 ChimerSeq STARFusion TCGA_RNA-Seq VWDE-HOTAIRM1 VWDE chr7 12406983 - HOTAIRM1 chr7 27139398 + Exonic hg19 PRAD TCGA-YL-A9WH 2 12 CDS-5'UTR Intra-chr p21.3 p15.2 Seq+ 42252 ChimerSeq STARFusion TCGA_RNA-Seq RAMP1-RBM44 RAMP1 chr2 238768370 + RBM44 chr2 238722235 + Exonic hg19 PRAD TCGA-KC-A4BL 4 21 CDS-5'UTR Intra-chr q37.3 q37.3 Seq+ 42253 ChimerSeq STARFusion TCGA_RNA-Seq TMEM259-CNN2 TMEM259 chr19 1014191 - CNN2 chr19 1031070 + Exonic hg19 PRAD TCGA-KC-A4BL 4 18 Out-of-frame Intra-chr p13.3 p13.3 42254 ChimerSeq STARFusion TCGA_RNA-Seq RAMP1-LRRFIP1 RAMP1 chr2 238768370 + LRRFIP1 chr2 238722235 + Exonic hg19 PRAD TCGA-KC-A4BL 4 11 CDS-3'UTR Intra-chr q37.3 q37.3 42255 ChimerSeq STARFusion TCGA_RNA-Seq PPAP2A-HCN1 PPAP2A chr5 54830400 - HCN1 chr5 45353348 - Exonic hg19 PRAD TCGA-KC-A4BL 4 5 Out-of-frame Intra-chr p12 42256 ChimerSeq STARFusion TCGA_RNA-Seq TMEM179B-SLC22A10 TMEM179B chr11 62556898 + SLC22A10 chr11 63064775 + Exonic hg19 PRAD TCGA-J4-A6M7 4 61 In-Frame Intra-chr q12.3 q12.3 Seq+ 42257 ChimerSeq STARFusion TCGA_RNA-Seq MED4-DCLK1 MED4 chr13 48651289 - DCLK1 chr13 36521594 - Exonic hg19 PRAD TCGA-J4-A67K 5 7 Out-of-frame Intra-chr q14.2 q13.3 CAMK:DCAMKL Seq+ 42258 ChimerSeq STARFusion TCGA_RNA-Seq DHX30-ZDHHC3 DHX30 chr3 47883227 + ZDHHC3 chr3 45000952 - Exonic hg19 PRAD TCGA-J4-A67K 3 13 CDS-5'UTR Intra-chr p21.31 Seq+ 42259 ChimerSeq STARFusion TCGA_RNA-Seq XBP1-MIR22HG XBP1 chr22 29196286 - MIR22HG chr17 1619566 - Exonic hg19 PRAD TCGA-J4-A67K 4 4 CDS-5'UTR Inter-chr q12.1 Transcription factor Seq+ 42260 ChimerSeq STARFusion TCGA_RNA-Seq KIF1C-NDEL1 KIF1C chr17 4918132 + NDEL1 chr17 8347578 + Exonic hg19 PRAD TCGA-J4-A67K 2 7 CDS-5'UTR Intra-chr p13.2 p13.1 Seq+ 42261 ChimerSeq STARFusion TCGA_RNA-Seq PPAP2A-ARL15 PPAP2A chr5 54830400 - ARL15 chr5 53467758 - Exonic hg19 PRAD TCGA-J4-A67N 3 6 Out-of-frame Intra-chr q11.2 Seq+ 42262 ChimerSeq STARFusion TCGA_RNA-Seq PPAP2A-MAPK1 PPAP2A chr5 54830400 - MAPK1 chr22 22143097 - Exonic hg19 PRAD TCGA-J4-A67N 2 4 Out-of-frame Inter-chr q11.22 Oncogene Seq+ 42263 ChimerSeq STARFusion TCGA_RNA-Seq SEMA3D-RBM28 SEMA3D chr7 84782924 - RBM28 chr7 127979845 - Exonic hg19 PRAD TCGA-CH-5788 7 14 5'UTR-CDS Intra-chr q21.11 q32.1 Seq+ 42264 ChimerSeq STARFusion TCGA_RNA-Seq GPD2-GALNT5 GPD2 chr2 157292316 + GALNT5 chr2 158140794 + Exonic hg19 PRAD TCGA-CH-5788 2 6 5'UTR-CDS Intra-chr q24.1 q24.1 Seq+ 42265 ChimerSeq STARFusion TCGA_RNA-Seq GPBP1L1-ZMPSTE24 GPBP1L1 chr1 46120215 - ZMPSTE24 chr1 40733458 + Exonic hg19 PRAD TCGA-CH-5788 2 5 In-Frame Intra-chr p34.1 Transcription factor p34.2 Seq+ 42266 ChimerSeq STARFusion TCGA_RNA-Seq CLPX-IGDCC4 CLPX chr15 65477413 - IGDCC4 chr15 65686886 - Exonic hg19 PRAD TCGA-EJ-A8FS 9 29 In-Frame Intra-chr q22.31 q22.31 Seq+ 42267 ChimerSeq STARFusion TCGA_RNA-Seq NEK7-CD1C NEK7 chr1 198126406 + CD1C chr1 158260924 + Exonic hg19 PRAD TCGA-EJ-A8FS 4 24 5'UTR-CDS Intra-chr q31.3 Other:NEK q23.1 Seq+ 42268 ChimerSeq STARFusion TCGA_RNA-Seq RNF41-SARNP RNF41 chr12 56615544 - SARNP chr12 56146624 - Exonic hg19 PRAD TCGA-J4-A67S 119 596 3'UTR-3'UTR Intra-chr q13.3 q13.2 Seq+ 42269 ChimerSeq STARFusion TCGA_RNA-Seq RNF41-SARNP RNF41 chr12 56615687 - SARNP chr12 56146624 - Exonic hg19 PRAD TCGA-J4-A67S 24 596 5'UTR-3'UTR Intra-chr q13.3 q13.2 Seq+ 42270 ChimerSeq STARFusion TCGA_RNA-Seq CASZ1-PRKD2 CASZ1 chr1 10710749 - PRKD2 chr19 47185005 - Exonic hg19 PRAD TCGA-J4-A67S 3 14 In-Frame Inter-chr p36.22 Transcription factor q13.32 Seq+ 42271 ChimerSeq STARFusion TCGA_RNA-Seq ST6GAL1-PSMC3 ST6GAL1 chr3 186681714 + PSMC3 chr11 47447833 - Exonic hg19 PRAD TCGA-J4-A67R 11 54 5'UTR-5'UTR Inter-chr q27.3 p11.2 Seq+ 42272 ChimerSeq STARFusion TCGA_RNA-Seq ST6GAL1-PSMC3 ST6GAL1 chr3 186681714 + PSMC3 chr11 47447501 - Exonic hg19 PRAD TCGA-J4-A67R 7 53 5'UTR-CDS Inter-chr q27.3 p11.2 Seq+ 42273 ChimerSeq STARFusion TCGA_RNA-Seq ST6GAL1-PSMC3 ST6GAL1 chr3 186692878 + PSMC3 chr11 47447501 - Exonic hg19 PRAD TCGA-J4-A67R 2 53 5'UTR-CDS Inter-chr q27.3 p11.2 Seq+ 42274 ChimerSeq STARFusion TCGA_RNA-Seq FDPS-IPO9 FDPS chr1 155282186 + IPO9 chr1 201840289 + Exonic hg19 PRAD TCGA-J4-A67Q 3 5 In-Frame Intra-chr q22 q32.1 Seq+ 42275 ChimerSeq STARFusion TCGA_RNA-Seq ZNF292-SMIM8 ZNF292 chr6 87865477 + SMIM8 chr6 88046727 + Exonic hg19 PRAD TCGA-EJ-A65G 7 19 Out-of-frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q15 42276 ChimerSeq STARFusion TCGA_RNA-Seq CPD-HDAC5 CPD chr17 28712254 + HDAC5 chr17 42171202 - Exonic hg19 PRAD TCGA-J4-A67T 77 126 In-Frame Intra-chr q11.2 Tumor suppressor gene q21.31 Seq+ 42277 ChimerSeq STARFusion TCGA_RNA-Seq LIMCH1-HOPX LIMCH1 chr4 41362953 + HOPX chr4 57522178 - Exonic hg19 PRAD TCGA-J4-A67T 7 39 In-Frame Intra-chr p13 q12 Tumor suppressor gene Seq+ 42278 ChimerSeq STARFusion TCGA_RNA-Seq LIMCH1-HOPX LIMCH1 chr4 41361820 + HOPX chr4 57522178 - Exonic hg19 PRAD TCGA-J4-A67T 2 38 5'UTR-5'UTR Intra-chr p13 q12 Tumor suppressor gene Seq+ 42279 ChimerSeq STARFusion TCGA_RNA-Seq GOLPH3-SLC6A19 GOLPH3 chr5 32173916 - SLC6A19 chr5 1219018 + Exonic hg19 PRAD TCGA-EJ-5496 7 10 In-Frame Intra-chr p13.3 p15.33 Seq+ 42280 ChimerSeq STARFusion TCGA_RNA-Seq LTBP1-BIRC6 LTBP1 chr2 33246273 + BIRC6 chr2 32631567 + Exonic hg19 PRAD TCGA-EJ-5496 2 4 In-Frame Intra-chr p22.3 p22.3 Seq+ 42281 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF3-RPP30 TM9SF3 chr10 98346491 - RPP30 chr10 92655637 + Exonic hg19 PRAD TCGA-EJ-5497 12 11 In-Frame Intra-chr q24.1 q23.31 Seq+ 42282 ChimerSeq STARFusion TCGA_RNA-Seq SLMAP-FLNB SLMAP chr3 57743576 + FLNB chr3 58121706 + Exonic hg19 PRAD TCGA-EJ-5497 8 15 In-Frame Intra-chr p14.3 p14.3 42283 ChimerSeq STARFusion TCGA_RNA-Seq NCOA4-C10orf25 NCOA4 chr10 51565296 + C10orf25 chr10 45495864 - Exonic hg19 PRAD TCGA-EJ-5497 6 11 5'UTR-CDS Intra-chr q11.22 Oncogene Tumor suppressor gene q11.21 Seq+ 42284 ChimerSeq STARFusion TCGA_RNA-Seq PDE4D-FGF14 PDE4D chr5 59783769 - FGF14 chr13 102379160 - Exonic hg19 PRAD TCGA-EJ-5497 5 13 5'UTR-CDS Inter-chr q12.1 q33.1 Seq+ 42285 ChimerSeq STARFusion TCGA_RNA-Seq RAF1-GXYLT2 RAF1 chr3 12705312 - GXYLT2 chr3 72957518 + Exonic hg19 PRAD TCGA-EJ-5497 3 9 5'UTR-CDS Intra-chr p25.2 TKL:RAF Oncogene p13 Seq+ 42286 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-GET4 INTS1 chr7 1510482 - GET4 chr7 930565 + Exonic hg19 PRAD TCGA-EJ-5497 3 6 In-Frame Intra-chr p22.3 p22.3 Seq+ 42287 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-SUN1 INTS1 chr7 1510482 - SUN1 chr7 930565 + Exonic hg19 PRAD TCGA-EJ-5497 3 6 CDS-3'UTR Intra-chr p22.3 p22.3 Seq+ 42288 ChimerSeq STARFusion TCGA_RNA-Seq NDRG1-DACT3 NDRG1 chr8 134292474 - DACT3 chr19 47156331 - Exonic hg19 PRAD TCGA-EJ-5498 15 186 Out-of-frame Inter-chr q24.22 Tumor suppressor gene q13.32 Seq+ 42289 ChimerSeq STARFusion TCGA_RNA-Seq KLHL2-GALNTL6 KLHL2 chr4 166141211 + GALNTL6 chr4 173852312 + Exonic hg19 PRAD TCGA-EJ-5498 8 16 Out-of-frame Intra-chr q32.3 q34.1 Seq+ 42290 ChimerSeq STARFusion TCGA_RNA-Seq ASB7-DEXI ASB7 chr15 101152632 + DEXI chr16 11023416 - Exonic hg19 PRAD TCGA-EJ-5498 4 14 CDS-3'UTR Inter-chr q26.3 p13.13 Seq+ 42291 ChimerSeq STARFusion TCGA_RNA-Seq PPARD-WDR27 PPARD chr6 35314927 + WDR27 chr6 170002417 - Exonic hg19 PRAD TCGA-EJ-5498 2 17 Out-of-frame Intra-chr p21.31 Transcription factor q27 Seq+ 42292 ChimerSeq STARFusion TCGA_RNA-Seq PHF20-EPB41L1 PHF20 chr20 34389527 + EPB41L1 chr20 34763473 + Exonic hg19 PRAD TCGA-EJ-5499 9 47 Out-of-frame Intra-chr q11.22 Transcription factor q11.23 Seq+ 42293 ChimerSeq STARFusion TCGA_RNA-Seq PHF20-EPB41L1 PHF20 chr20 34389527 + EPB41L1 chr20 34761686 + Exonic hg19 PRAD TCGA-EJ-5499 9 46 CDS-5'UTR Intra-chr q11.22 Transcription factor q11.23 Seq+ 42294 ChimerSeq STARFusion TCGA_RNA-Seq BRWD1-RAPGEF4 BRWD1 chr21 40670358 - RAPGEF4 chr2 173913328 + Exonic hg19 PRAD TCGA-HC-7081 31 60 Out-of-frame Inter-chr q22.2 q31.1 Seq+ 42295 ChimerSeq STARFusion TCGA_RNA-Seq PRKRA-SEC31A PRKRA chr2 179315693 - SEC31A chr4 83803093 - Exonic hg19 PRAD TCGA-HC-7081 4 22 CDS-5'UTR Inter-chr q31.2 q21.22 Seq+ 42296 ChimerSeq STARFusion TCGA_RNA-Seq ZNF292-PTPRO ZNF292 chr6 87865477 + PTPRO chr12 15652376 + Exonic hg19 PRAD TCGA-HC-7081 2 9 Out-of-frame Inter-chr q14.3 Tumor suppressor gene Transcription factor p12.3 Seq+ 42297 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD2-MACROD2 PCMTD2 chr20 62891625 + MACROD2 chr20 15210586 + Exonic hg19 PRAD TCGA-HC-7080 5 15 In-Frame Intra-chr p12.1 Seq+ 42298 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT5-PRSS55 AGPAT5 chr8 6566408 + PRSS55 chr8 10387017 + Exonic hg19 PRAD TCGA-HC-7080 3 15 Out-of-frame Intra-chr p23.1 p23.1 Seq+ 42299 ChimerSeq STARFusion TCGA_RNA-Seq BCL2L13-GAB4 BCL2L13 chr22 18138598 + GAB4 chr22 17446158 - Exonic hg19 PRAD TCGA-HI-7168 66 310 In-Frame Intra-chr q11.21 q11.1 Seq+ 42300 ChimerSeq STARFusion TCGA_RNA-Seq UBE2R2-ITLN1 UBE2R2 chr9 33900269 + ITLN1 chr1 160846606 - Exonic hg19 PRAD TCGA-HI-7168 9 29 Out-of-frame Inter-chr p13.3 q23.3 Seq+ 42301 ChimerSeq STARFusion TCGA_RNA-Seq LRP8-RPL14 LRP8 chr1 53793512 - RPL14 chr3 40503543 + Exonic hg19 PRAD TCGA-QU-A6IM 4 3 Out-of-frame Inter-chr p32.3 p22.1 42302 ChimerSeq STARFusion TCGA_RNA-Seq SLC20A2-LINC00505 SLC20A2 chr8 42294507 - LINC00505 chr1 46947882 + Exonic hg19 PRAD TCGA-QU-A6IN 20 61 Out-of-frame Inter-chr p11.21 42303 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD1-ST18 PCMTD1 chr8 52811490 - ST18 chr8 53142637 - Exonic hg19 PRAD TCGA-VP-A878 2 8 5'UTR-5'UTR Intra-chr q11.23 q11.23 Transcription factor Seq+ 42304 ChimerSeq STARFusion TCGA_RNA-Seq RBM5-CYB561D2 RBM5 chr3 50143142 + CYB561D2 chr3 50390672 + Exonic hg19 PRAD TCGA-MG-AAMC 13 26 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene Seq+ 42305 ChimerSeq STARFusion TCGA_RNA-Seq PSD3-NEFL PSD3 chr8 18871073 - NEFL chr8 24811819 - Exonic hg19 PRAD TCGA-MG-AAMC 9 13 In-Frame Intra-chr p22 p21.2 Seq+ 42306 ChimerSeq STARFusion TCGA_RNA-Seq BANK1-C4orf22 BANK1 chr4 102839346 + C4orf22 chr4 81884671 + Exonic hg19 PRAD TCGA-XK-AAJT 14 32 In-Frame Intra-chr q24 q21.21 Seq+ 42307 ChimerSeq STARFusion TCGA_RNA-Seq RAB4A-CNIH3 RAB4A chr1 229434819 + CNIH3 chr1 224708702 + Exonic hg19 PRAD TCGA-WW-A8ZI 166 545 CDS-5'UTR Intra-chr q42.13 q42.12 Seq+ 42308 ChimerSeq STARFusion TCGA_RNA-Seq ACPP-ZNF462 ACPP chr3 132036420 + ZNF462 chr9 109685635 + Exonic hg19 PRAD TCGA-WW-A8ZI 12 44 5'UTR-5'UTR Inter-chr q22.1 q31.2 Transcription factor Seq+ 42309 ChimerSeq STARFusion TCGA_RNA-Seq GAK-ZNF114 GAK chr4 864499 - ZNF114 chr19 48774544 + Exonic hg19 PRAD TCGA-WW-A8ZI 4 14 CDS-5'UTR Inter-chr p16.3 Other:NAK q13.33 Transcription factor 42310 ChimerSeq STARFusion TCGA_RNA-Seq TP53-ECSIT TP53 chr17 7576853 - ECSIT chr19 11630008 - Exonic hg19 PRAD TCGA-WW-A8ZI 3 7 CDS-5'UTR Inter-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.2 Seq+ 42311 ChimerSeq STARFusion TCGA_RNA-Seq NUDT4-ATAD5 NUDT4 chr12 93772197 + ATAD5 chr17 29187451 + Exonic hg19 PRAD TCGA-V1-A9Z8 3 12 Out-of-frame Inter-chr q22 q11.2 Seq+ 42312 ChimerSeq STARFusion TCGA_RNA-Seq NUDT4-ATAD5 NUDT4 chr12 93774807 + ATAD5 chr17 29187451 + Exonic hg19 PRAD TCGA-V1-A9Z8 2 11 Out-of-frame Inter-chr q22 q11.2 Seq+ 42313 ChimerSeq STARFusion TCGA_RNA-Seq GALNT3-TTC21B GALNT3 chr2 166650525 - TTC21B chr2 166758420 - Exonic hg19 PRAD TCGA-V1-A9Z8 2 5 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 42314 ChimerSeq STARFusion TCGA_RNA-Seq PDE4D-ELOVL7 PDE4D chr5 59783769 - ELOVL7 chr5 60095057 - Exonic hg19 PRAD TCGA-V1-A9Z9 2 4 5'UTR-5'UTR Intra-chr q12.1 q12.1 Seq+ 42315 ChimerSeq STARFusion TCGA_RNA-Seq RB1CC1-ST18 RB1CC1 chr8 53626635 - ST18 chr8 53142637 - Exonic hg19 PRAD TCGA-V1-A9Z7 5 34 5'UTR-5'UTR Intra-chr q11.23 Tumor suppressor gene q11.23 Transcription factor Seq+ 42316 ChimerSeq STARFusion TCGA_RNA-Seq RB1CC1-ST18 RB1CC1 chr8 53626635 - ST18 chr8 53126817 - Exonic hg19 PRAD TCGA-V1-A9Z7 2 34 5'UTR-5'UTR Intra-chr q11.23 Tumor suppressor gene q11.23 Transcription factor Seq+ 42317 ChimerSeq STARFusion TCGA_RNA-Seq RB1CC1-ST18 RB1CC1 chr8 53626635 - ST18 chr8 53159224 - Exonic hg19 PRAD TCGA-V1-A9Z7 2 34 5'UTR-5'UTR Intra-chr q11.23 Tumor suppressor gene q11.23 Transcription factor Seq+ 42318 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649522 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-HC-7821 42 176 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 42319 ChimerSeq STARFusion TCGA_RNA-Seq RABGAP1-NIPSNAP3B RABGAP1 chr9 125761045 + NIPSNAP3B chr9 107535103 + Exonic hg19 PRAD TCGA-HC-7821 19 152 Out-of-frame Intra-chr q33.2 q31.1 Seq+ 42320 ChimerSeq STARFusion TCGA_RNA-Seq RABGAP1-NIPSNAP3B RABGAP1 chr9 125761045 + NIPSNAP3B chr9 107521366 + Exonic hg19 PRAD TCGA-HC-7821 6 122 CDS-5'UTR Intra-chr q33.2 q31.1 Seq+ 42321 ChimerSeq STARFusion TCGA_RNA-Seq RALGAPA2-C1orf63 RALGAPA2 chr20 20453400 - C1orf63 chr1 25573520 - Exonic hg19 PRAD TCGA-HC-7821 16 30 CDS-5'UTR Inter-chr p11.23 42322 ChimerSeq STARFusion TCGA_RNA-Seq PDE4D-PPAP2A PDE4D chr5 58476421 - PPAP2A chr5 54737736 - Exonic hg19 PRAD TCGA-HC-7821 2 21 Out-of-frame Intra-chr q12.1 Seq+ 42323 ChimerSeq STARFusion TCGA_RNA-Seq MKLN1-AMTN MKLN1 chr7 130887733 + AMTN chr4 71394440 + Exonic hg19 PRAD TCGA-HC-7821 2 15 5'UTR-CDS Inter-chr q32.3 q13.3 Seq+ 42324 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649522 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-HC-7820 47 256 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 42325 ChimerSeq STARFusion TCGA_RNA-Seq STAT3-RAB5C STAT3 chr17 40475022 - RAB5C chr17 40278866 - Exonic hg19 PRAD TCGA-HC-7820 8 18 Out-of-frame Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q21.2 42326 ChimerSeq STARFusion TCGA_RNA-Seq NCOA4-SRSF7 NCOA4 chr10 51565296 + SRSF7 chr2 38977336 - Exonic hg19 PRAD TCGA-Y6-A9XI 24 91 5'UTR-CDS Inter-chr q11.22 Oncogene Tumor suppressor gene p22.1 Seq+ 42327 ChimerSeq STARFusion TCGA_RNA-Seq GTF2B-ODF2L GTF2B chr1 89357166 - ODF2L chr1 86826219 - Exonic hg19 PRAD TCGA-Y6-A9XI 5 28 Out-of-frame Intra-chr p22.2 Transcription factor p22.3 Seq+ 42328 ChimerSeq STARFusion TCGA_RNA-Seq ARID5B-KAT6A ARID5B chr10 63852460 + KAT6A chr8 41839472 - Exonic hg19 PRAD TCGA-Y6-A9XI 4 19 Out-of-frame Inter-chr q21.2 Transcription factor p11.21 Oncogene Seq+ 42329 ChimerSeq STARFusion TCGA_RNA-Seq AGAP1-RHOU AGAP1 chr2 236403493 + RHOU chr1 228879032 + Exonic hg19 PRAD TCGA-Y6-A9XI 3 13 Out-of-frame Inter-chr q37.2 q42.13 Seq+ 42330 ChimerSeq STARFusion TCGA_RNA-Seq PLD1-LMBR1 PLD1 chr3 171488985 - LMBR1 chr7 156629579 - Exonic hg19 PRAD TCGA-Y6-A9XI 2 14 5'UTR-CDS Inter-chr q26.31 Tumor suppressor gene q36.3 Seq+ 42331 ChimerSeq STARFusion TCGA_RNA-Seq GABARAP-NUP205 GABARAP chr17 7143717 - NUP205 chr7 135333073 + Exonic hg19 PRAD TCGA-V1-A9ZR 35 157 Out-of-frame Inter-chr p13.1 Tumor suppressor gene q33 Seq+ 42332 ChimerSeq STARFusion TCGA_RNA-Seq GABARAP-NUP205 GABARAP chr17 7144125 - NUP205 chr7 135333152 + Exonic hg19 PRAD TCGA-V1-A9ZR 16 156 3'UTR-CDS Inter-chr p13.1 Tumor suppressor gene q33 Seq+ 42333 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-ETV4 CLTC chr17 57744338 + ETV4 chr17 41613847 - Exonic hg19 PRAD TCGA-V1-A9ZR 9 30 In-Frame Intra-chr q23.1 q21.31 Oncogene Transcription factor Seq+ 42334 ChimerSeq STARFusion TCGA_RNA-Seq RNF4-RGS12 RNF4 chr4 2502465 + RGS12 chr4 3379897 + Exonic hg19 PRAD TCGA-V1-A9ZR 4 14 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 42335 ChimerSeq STARFusion TCGA_RNA-Seq NUP205-DVL2 NUP205 chr7 135330979 + DVL2 chr17 7133474 - Exonic hg19 PRAD TCGA-V1-A9ZR 5 6 Out-of-frame Inter-chr q33 p13.1 Seq+ 42336 ChimerSeq STARFusion TCGA_RNA-Seq C16orf62-CDR2 C16orf62 chr16 19621737 + CDR2 chr16 22361170 - Exonic hg19 PRAD TCGA-V1-A9ZR 5 5 In-Frame Intra-chr p12.3 p12.2 Seq+ 42337 ChimerSeq STARFusion TCGA_RNA-Seq TUBB3-TRPM5 TUBB3 chr16 89989866 + TRPM5 chr11 2439821 - Exonic hg19 PRAD TCGA-V1-A9ZI 6 16 Out-of-frame Inter-chr q24.3 p15.5 Seq+ 42338 ChimerSeq STARFusion TCGA_RNA-Seq NCOR1-TFDP2 NCOR1 chr17 15960828 - TFDP2 chr3 141693033 - Exonic hg19 PRAD TCGA-V1-A9ZI 4 2 Out-of-frame Inter-chr p11.2 Oncogene q23 Transcription factor Seq+ 42339 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38075947 + MIPOL1 chr14 37969113 + Exonic hg19 PRAD TCGA-V1-A9ZK 51 78 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 42340 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38065213 + MIPOL1 chr14 37969113 + Exonic hg19 PRAD TCGA-V1-A9ZK 9 78 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 42341 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38075947 + MIPOL1 chr14 38016110 + Exonic hg19 PRAD TCGA-V1-A9ZK 6 78 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 42342 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF2-BBS9 ZNRF2 chr7 30395449 + BBS9 chr7 33303902 + Exonic hg19 PRAD TCGA-V1-A9ZK 7 21 In-Frame Intra-chr p14.3 p14.3 Seq+ 42343 ChimerSeq STARFusion TCGA_RNA-Seq CUL2-CYP2C18 CUL2 chr10 35379358 - CYP2C18 chr10 96447527 + Exonic hg19 PRAD TCGA-V1-A9ZK 5 14 5'UTR-CDS Intra-chr p11.21 Tumor suppressor gene q23.33 Seq+ 42344 ChimerSeq STARFusion TCGA_RNA-Seq CUL2-CYP2C18 CUL2 chr10 35379107 - CYP2C18 chr10 96447527 + Exonic hg19 PRAD TCGA-V1-A9ZK 2 13 5'UTR-CDS Intra-chr p11.21 Tumor suppressor gene q23.33 Seq+ 42345 ChimerSeq STARFusion TCGA_RNA-Seq FOXP2-ENKUR FOXP2 chr7 114006695 + ENKUR chr10 25288475 - Exonic hg19 PRAD TCGA-V1-A9ZK 2 7 5'UTR-CDS Inter-chr q31.1 Transcription factor p12.1 Seq+ 42346 ChimerSeq STARFusion TCGA_RNA-Seq RAP1GDS1-H2AFZ RAP1GDS1 chr4 99214666 + H2AFZ chr4 100870897 - Exonic hg19 PRAD TCGA-V1-A9ZK 2 7 Out-of-frame Intra-chr q23 q23 Seq+ 42347 ChimerSeq STARFusion TCGA_RNA-Seq FAM156A-XAGE1C FAM156A chrX 52984352 - XAGE1C chrX 52513409 + Exonic hg19 PRAD TCGA-V1-A9ZK 2 6 5'UTR-5'UTR Intra-chr p11.22 42348 ChimerSeq STARFusion TCGA_RNA-Seq PPAP2A-LINC00623 PPAP2A chr5 54737679 - LINC00623 chr1 144301536 - Exonic hg19 PRAD TCGA-G9-A9S7 7 52 Out-of-frame Inter-chr p11.2 42349 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L2-DNM1 DIS3L2 chr2 233128150 + DNM1 chr9 130996300 + Exonic hg19 PRAD TCGA-G9-A9S7 11 24 Out-of-frame Inter-chr q37.1 q34.11 Seq+ 42350 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-KLF4 TMPRSS2 chr21 42860321 - KLF4 chr9 110251619 - Exonic hg19 PRAD TCGA-G9-A9S7 8 34 CDS-5'UTR Inter-chr q22.3 q31.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 42351 ChimerSeq STARFusion TCGA_RNA-Seq CDH1-CA1 CDH1 chr16 68772314 + CA1 chr8 86245849 - Exonic hg19 PRAD TCGA-G9-A9S7 7 30 Out-of-frame Inter-chr q22.1 Oncogene Tumor suppressor gene q21.2 Seq+ 42352 ChimerSeq STARFusion TCGA_RNA-Seq KDM4B-ASTN2 KDM4B chr19 4969241 + ASTN2 chr9 119382722 - Exonic hg19 PRAD TCGA-G9-A9S7 9 11 5'UTR-CDS Inter-chr p13.3 q33.1 Seq+ 42353 ChimerSeq STARFusion TCGA_RNA-Seq KLHDC4-MAF KLHDC4 chr16 87799398 - MAF chr16 79628450 - Exonic hg19 PRAD TCGA-G9-A9S7 6 14 Out-of-frame Intra-chr q24.2 q23.2 Oncogene Transcription factor Seq+ 42354 ChimerSeq STARFusion TCGA_RNA-Seq TFRC-BLOC1S5 TFRC chr3 195803935 - BLOC1S5 chr6 8041501 - Exonic hg19 PRAD TCGA-G9-A9S7 2 12 Out-of-frame Inter-chr q29 p24.3 Seq+ 42355 ChimerSeq STARFusion TCGA_RNA-Seq SUFU-KCNH2 SUFU chr10 104309863 + KCNH2 chr7 150672029 - Exonic hg19 PRAD TCGA-G9-A9S4 9 24 In-Frame Inter-chr q24.32 Oncogene Tumor suppressor gene q36.1 Seq+ 42356 ChimerSeq STARFusion TCGA_RNA-Seq SUFU-KCNH2 SUFU chr10 104330355 + KCNH2 chr7 150672029 - Exonic hg19 PRAD TCGA-G9-A9S4 3 24 Out-of-frame Inter-chr q24.32 Oncogene Tumor suppressor gene q36.1 Seq+ 42357 ChimerSeq STARFusion TCGA_RNA-Seq IFT122-PITPNB IFT122 chr3 129183624 + PITPNB chr22 28250927 - Exonic hg19 PRAD TCGA-G9-A9S4 2 8 Out-of-frame Inter-chr q21.3 q12.1 Seq+ 42358 ChimerSeq STARFusion TCGA_RNA-Seq DCAF6-MPZL1 DCAF6 chr1 167992285 + MPZL1 chr1 167734820 + Exonic hg19 PRAD TCGA-G9-A9S0 4 23 In-Frame Intra-chr q24.2 q24.2 KB Seq+ 42359 ChimerSeq STARFusion TCGA_RNA-Seq MIR29B1-AFAP1L2 MIR29B1 chr7 130596869 - AFAP1L2 chr10 116059174 - Exonic hg19 PRAD TCGA-G9-A9S0 6 14 5'UTR-CDS Inter-chr q32.3 Tumor suppressor gene q25.3 Tumor suppressor gene 42360 ChimerSeq STARFusion TCGA_RNA-Seq DCAF6-MPZL1 DCAF6 chr1 167974031 + MPZL1 chr1 167734820 + Exonic hg19 PRAD TCGA-G9-A9S0 4 19 In-Frame Intra-chr q24.2 q24.2 KB Seq+ 42361 ChimerSeq STARFusion TCGA_RNA-Seq RAB11FIP4-ARHGAP23 RAB11FIP4 chr17 29852248 + ARHGAP23 chr17 36614346 + Exonic hg19 PRAD TCGA-G9-A9S0 3 3 Out-of-frame Intra-chr q11.2 q12 Seq+ 42362 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP23-ZSCAN2 ARHGAP23 chr17 36617176 + ZSCAN2 chr15 85159540 + Exonic hg19 PRAD TCGA-G9-A9S0 2 6 In-Frame Inter-chr q12 q25.2 Transcription factor Seq+ 42363 ChimerSeq STARFusion TCGA_RNA-Seq CDK7-SH3BGR CDK7 chr5 68531280 + SH3BGR chr21 40871749 + Exonic hg19 PRAD TCGA-ZG-A9NI 6 15 In-Frame Inter-chr CMGC:CDK q22.2 Seq+ 42364 ChimerSeq STARFusion TCGA_RNA-Seq TMEFF2-RLIM TMEFF2 chr2 193044394 - RLIM chrX 73815835 - Exonic hg19 PRAD TCGA-ZG-A9NI 3 8 CDS-5'UTR Inter-chr q32.3 Tumor suppressor gene q13.2 Seq+ 42365 ChimerSeq STARFusion TCGA_RNA-Seq WDFY3-HNRNPD WDFY3 chr4 85800559 - HNRNPD chr4 83276554 - Exonic hg19 PRAD TCGA-J4-A67M 8 35 5'UTR-CDS Intra-chr q21.23 q21.22 Seq+ 42366 ChimerSeq STARFusion TCGA_RNA-Seq WDFY3-HNRNPD WDFY3 chr4 85818064 - HNRNPD chr4 83276554 - Exonic hg19 PRAD TCGA-J4-A67M 8 32 5'UTR-CDS Intra-chr q21.23 q21.22 Seq+ 42367 ChimerSeq STARFusion TCGA_RNA-Seq EFTUD2-SIN3A EFTUD2 chr17 42931637 - SIN3A chr15 75664550 - Exonic hg19 PRAD TCGA-J4-A67M 3 8 Out-of-frame Inter-chr q21.31 q24.2 Seq+ 42368 ChimerSeq STARFusion TCGA_RNA-Seq SMAD4-SKAP1 SMAD4 chr18 48593557 + SKAP1 chr17 46474147 - Exonic hg19 PRAD TCGA-J4-A67L 3 9 Out-of-frame Inter-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q21.32 Seq+ 42369 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A3-FAF1 SLC45A3 chr1 205649522 - FAF1 chr1 50941351 - Exonic hg19 PRAD TCGA-J4-AATV 3 18 5'UTR-CDS Intra-chr q32.1 p32.3 Seq+ 42370 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-LSAMP ZBTB20 chr3 114693213 - LSAMP chr3 115738487 - Exonic hg19 PRAD TCGA-J4-AATZ 20 194 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.31 Tumor suppressor gene Seq+ 42371 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-PDE6H ETV6 chr12 11803094 + PDE6H chr12 15130906 + Exonic hg19 PRAD TCGA-J4-AATZ 40 91 CDS-5'UTR Intra-chr p13.2 Tumor suppressor gene Transcription factor p12.3 Seq+ 42372 ChimerSeq STARFusion TCGA_RNA-Seq SEL1L-ANGEL1 SEL1L chr14 81952016 - ANGEL1 chr14 77275986 - Exonic hg19 PRAD TCGA-J4-AATZ 12 49 In-Frame Intra-chr q31.1 q24.3 Seq+ 42373 ChimerSeq STARFusion TCGA_RNA-Seq IREB2-CTSH IREB2 chr15 78732223 + CTSH chr15 79231513 - Exonic hg19 PRAD TCGA-J4-AATZ 7 27 In-Frame Intra-chr q25.1 q25.1 Seq+ 42374 ChimerSeq STARFusion TCGA_RNA-Seq SERINC5-ATP8B5P SERINC5 chr5 79551715 - ATP8B5P chr9 35444382 + Exonic hg19 PRAD TCGA-J4-AATZ 7 24 CDS-5'UTR Inter-chr q14.1 p13.3 Seq+ 42375 ChimerSeq STARFusion TCGA_RNA-Seq JHDM1D-AGK JHDM1D chr7 139876544 - AGK chr7 141349063 + Exonic hg19 PRAD TCGA-J4-AATZ 6 25 Out-of-frame Intra-chr Seq+ 42376 ChimerSeq STARFusion TCGA_RNA-Seq SMAD9-CCNA1 SMAD9 chr13 37427556 - CCNA1 chr13 37007170 + Exonic hg19 PRAD TCGA-J4-AATZ 5 17 In-Frame Intra-chr q13.3 Transcription factor q13.3 Seq+ 42377 ChimerSeq STARFusion TCGA_RNA-Seq GGT1-PRODH GGT1 chr22 24990853 + PRODH chr22 18918711 - Exonic hg19 PRAD TCGA-J4-AATZ 3 20 5'UTR-5'UTR Intra-chr q11.23 q11.21 Tumor suppressor gene Seq+ 42378 ChimerSeq STARFusion TCGA_RNA-Seq SMAD9-CCNA1 SMAD9 chr13 37427556 - CCNA1 chr13 37007173 + Exonic hg19 PRAD TCGA-J4-AATZ 3 17 In-Frame Intra-chr q13.3 Transcription factor q13.3 Seq+ 42379 ChimerSeq STARFusion TCGA_RNA-Seq TESK1-ATP8B5P TESK1 chr9 35606282 + ATP8B5P chr9 35433704 + Exonic hg19 PRAD TCGA-J4-AATZ 5 9 CDS-5'UTR Intra-chr p13.3 TKL:LISK p13.3 Seq+ 42380 ChimerSeq STARFusion TCGA_RNA-Seq PRR15L-GPATCH8 PRR15L chr17 46035023 - GPATCH8 chr17 42483419 - Exonic hg19 PRAD TCGA-J4-AATZ 3 10 5'UTR-CDS Intra-chr q21.32 q21.31 Seq+ 42381 ChimerSeq STARFusion TCGA_RNA-Seq CORO2A-KBTBD4 CORO2A chr9 100954841 - KBTBD4 chr11 47599580 - Exonic hg19 PRAD TCGA-J4-AATZ 2 13 5'UTR-5'UTR Inter-chr q22.33 p11.2 Seq+ 42382 ChimerSeq STARFusion TCGA_RNA-Seq MARK1-C1orf115 MARK1 chr1 220754460 + C1orf115 chr1 220869954 + Exonic hg19 PRAD TCGA-J4-AATZ 2 8 In-Frame Intra-chr q41 CAMK:CAMKL Oncogene q41 Seq+ 42383 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHJ1-TCF3 PLEKHJ1 chr19 2235922 - TCF3 chr19 1622414 - Exonic hg19 PRAD TCGA-M7-A71Z 10 83 In-Frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Transcription factor Seq+ 42384 ChimerSeq STARFusion TCGA_RNA-Seq YBX1-AXDND1 YBX1 chr1 43149137 + AXDND1 chr1 179437578 + Exonic hg19 PRAD TCGA-M7-A71Z 5 30 Out-of-frame Intra-chr p34.2 Transcription factor q25.2 Seq+ 42385 ChimerSeq STARFusion TCGA_RNA-Seq RIOK3-ZNF521 RIOK3 chr18 21047490 + ZNF521 chr18 22925311 - Exonic hg19 PRAD TCGA-M7-A71Z 4 7 Out-of-frame Intra-chr q11.2 Atypical:RIO q11.2 Oncogene Transcription factor Seq+ 42386 ChimerSeq STARFusion TCGA_RNA-Seq RIOK3-ZNF521 RIOK3 chr18 21046240 + ZNF521 chr18 22925311 - Exonic hg19 PRAD TCGA-M7-A71Z 3 7 Out-of-frame Intra-chr q11.2 Atypical:RIO q11.2 Oncogene Transcription factor Seq+ 42387 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649522 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-M7-A71Y 25 165 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 42388 ChimerSeq STARFusion TCGA_RNA-Seq SPIDR-ATP6V1G1P2 SPIDR chr8 48206619 + ATP6V1G1P2 chr8 48105985 - Exonic hg19 PRAD TCGA-M7-A71Y 3 4 Out-of-frame Intra-chr q11.21 q11.1 42389 ChimerSeq STARFusion TCGA_RNA-Seq LRP8-RPL14 LRP8 chr1 53793512 - RPL14 chr3 40503543 + Exonic hg19 PRAD TCGA-M7-A71Y 3 2 Out-of-frame Inter-chr p32.3 p22.1 42390 ChimerSeq STARFusion TCGA_RNA-Seq ZNF704-TPD52 ZNF704 chr8 81733609 - TPD52 chr8 80976828 - Exonic hg19 PRAD TCGA-M7-A71Y 2 6 Out-of-frame Intra-chr q21.13 Transcription factor q21.13 Seq+ 42391 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649522 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-2A-A8W3 302 1143 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 42392 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-RAMP2 WIPF2 chr17 38375744 + RAMP2 chr17 40910465 + Exonic hg19 PRAD TCGA-2A-A8W3 17 71 5'UTR-5'UTR Intra-chr q21.2 q21.2 Seq+ 42393 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2B-KCNN3 GATAD2B chr1 153895209 - KCNN3 chr1 154744869 - Exonic hg19 PRAD TCGA-2A-A8W3 14 53 5'UTR-CDS Intra-chr Transcription factor q21.3 Seq+ 42394 ChimerSeq STARFusion TCGA_RNA-Seq ALG12-CDT1 ALG12 chr22 50311911 - CDT1 chr16 88873459 + Exonic hg19 PRAD TCGA-2A-A8W3 11 56 5'UTR-CDS Inter-chr q13.33 q24.3 Seq+ 42395 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-RAMP2 WIPF2 chr17 38375744 + RAMP2 chr17 40903920 + Exonic hg19 PRAD TCGA-2A-A8W3 3 70 5'UTR-5'UTR Intra-chr q21.2 q21.2 Seq+ 42396 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-RAMP2 WIPF2 chr17 38375744 + RAMP2 chr17 40913852 + Exonic hg19 PRAD TCGA-2A-A8W3 2 70 5'UTR-CDS Intra-chr q21.2 q21.2 Seq+ 42397 ChimerSeq STARFusion TCGA_RNA-Seq PER1-ENOPH1 PER1 chr17 8045967 - ENOPH1 chr4 83369073 + Exonic hg19 PRAD TCGA-2A-A8W3 4 30 Out-of-frame Inter-chr p13.1 Oncogene q21.22 Seq+ 42398 ChimerSeq STARFusion TCGA_RNA-Seq USP43-TMEM116 USP43 chr17 9559851 + TMEM116 chr12 112371834 - Exonic hg19 PRAD TCGA-2A-A8W3 3 8 In-Frame Inter-chr p13.1 q24.13 Seq+ 42399 ChimerSeq STARFusion TCGA_RNA-Seq TOB2-MRPS18B TOB2 chr22 41842383 - MRPS18B chr6 30592660 + Exonic hg19 PRAD TCGA-2A-A8W1 96 273 5'UTR-CDS Inter-chr q13.2 Seq+ 42400 ChimerSeq STARFusion TCGA_RNA-Seq SH3GLB2-GTSE1 SH3GLB2 chr9 131790371 - GTSE1 chr22 46722333 + Exonic hg19 PRAD TCGA-2A-A8W1 17 34 Out-of-frame Inter-chr q34.11 q13.31 Seq+ 42401 ChimerSeq STARFusion TCGA_RNA-Seq UBE2E2-ZNF385D UBE2E2 chr3 23258803 + ZNF385D chr3 21706520 - Exonic hg19 PRAD TCGA-2A-A8W1 10 30 Out-of-frame Intra-chr p24.3 p24.3 Transcription factor Seq+ 42402 ChimerSeq STARFusion TCGA_RNA-Seq ST7-PTPRZ1 ST7 chr7 116593745 + PTPRZ1 chr7 121568210 + Exonic hg19 PRAD TCGA-2A-A8W1 7 28 In-Frame Intra-chr q31.2 Tumor suppressor gene q31.32 Seq+ 42403 ChimerSeq STARFusion TCGA_RNA-Seq FAM114A1-KCNIP4 FAM114A1 chr4 38870167 + KCNIP4 chr4 21764655 - Exonic hg19 PRAD TCGA-2A-A8W1 3 15 5'UTR-5'UTR Intra-chr p14 p15.2 Seq+ 42404 ChimerSeq STARFusion TCGA_RNA-Seq SMS-PPARGC1A SMS chrX 21958991 + PPARGC1A chr4 23886554 - Exonic hg19 PRAD TCGA-2A-A8W1 2 4 Out-of-frame Inter-chr p22.11 p15.2 Seq+ 42405 ChimerSeq STARFusion TCGA_RNA-Seq UHRF1BP1-RIOK1 UHRF1BP1 chr6 34825694 + RIOK1 chr6 7417564 + Exonic hg19 PRAD TCGA-CH-5740 16 40 In-Frame Intra-chr p21.31 p24.3 Atypical:RIO Seq+ 42406 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPH2-TMEM27 HNRNPH2 chrX 100667512 + TMEM27 chrX 15657879 - Exonic hg19 PRAD TCGA-CH-5740 12 31 Out-of-frame Intra-chr q22.1 p22.2 Seq+ 42407 ChimerSeq STARFusion TCGA_RNA-Seq CPD-PIGW CPD chr17 28706744 + PIGW chr17 34892943 + Exonic hg19 PRAD TCGA-CH-5740 11 34 CDS-5'UTR Intra-chr q11.2 Tumor suppressor gene q12 Seq+ 42408 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPH2-TMEM27 HNRNPH2 chrX 100667100 + TMEM27 chrX 15657879 - Exonic hg19 PRAD TCGA-CH-5740 3 30 Out-of-frame Intra-chr q22.1 p22.2 Seq+ 42409 ChimerSeq STARFusion TCGA_RNA-Seq NFIA-CYP2J2 NFIA chr1 61554352 + CYP2J2 chr1 60359501 - Exonic hg19 PRAD TCGA-CH-5740 3 10 In-Frame Intra-chr p31.3 Transcription factor p32.1 Seq+ 42410 ChimerSeq STARFusion TCGA_RNA-Seq TPTE2P5-LMO7 TPTE2P5 chr13 41400642 - LMO7 chr13 76410533 + Exonic hg19 PRAD TCGA-CH-5740 2 12 Out-of-frame Intra-chr q14.11 q22.2 Seq+ 42411 ChimerSeq STARFusion TCGA_RNA-Seq FAM13B-CDC25C FAM13B chr5 137368471 - CDC25C chr5 137627805 - Exonic hg19 PRAD TCGA-CH-5740 2 6 5'UTR-CDS Intra-chr q31.2 q31.2 Seq+ 42412 ChimerSeq STARFusion TCGA_RNA-Seq THRAP3-RPN1 THRAP3 chr1 36690106 + RPN1 chr3 128363826 - Exonic hg19 PRAD TCGA-CH-5740 2 6 5'UTR-CDS Inter-chr p34.3 q21.3 Seq+ 42413 ChimerSeq STARFusion TCGA_RNA-Seq TRIO-IQUB TRIO chr5 14304701 + IQUB chr7 123097620 - Exonic hg19 PRAD TCGA-CH-5741 27 75 In-Frame Inter-chr p15.2 q31.32 Seq+ 42414 ChimerSeq STARFusion TCGA_RNA-Seq AFF4-DTWD2 AFF4 chr5 132298951 - DTWD2 chr5 118183913 - Exonic hg19 PRAD TCGA-CH-5744 15 65 5'UTR-CDS Intra-chr q31.1 q23.1 Seq+ 42415 ChimerSeq STARFusion TCGA_RNA-Seq COX14-LIMA1 COX14 chr12 50506084 + LIMA1 chr12 50586344 - Exonic hg19 PRAD TCGA-CH-5744 12 60 5'UTR-CDS Intra-chr q13.12 q13.12 Tumor suppressor gene Seq+ 42416 ChimerSeq STARFusion TCGA_RNA-Seq COX14-LIMA1 COX14 chr12 50506084 + LIMA1 chr12 50586347 - Exonic hg19 PRAD TCGA-CH-5744 5 60 5'UTR-CDS Intra-chr q13.12 q13.12 Tumor suppressor gene Seq+ 42417 ChimerSeq STARFusion TCGA_RNA-Seq COX14-LIMA1 COX14 chr12 50506084 + LIMA1 chr12 50575820 - Exonic hg19 PRAD TCGA-CH-5744 2 60 5'UTR-CDS Intra-chr q13.12 q13.12 Tumor suppressor gene Seq+ 42418 ChimerSeq STARFusion TCGA_RNA-Seq NT5DC1-RDH11 NT5DC1 chr6 116422186 + RDH11 chr14 68159310 - Exonic hg19 PRAD TCGA-CH-5744 6 32 Out-of-frame Inter-chr q22.1 q24.1 Seq+ 42419 ChimerSeq STARFusion TCGA_RNA-Seq ECSIT-RGL3 ECSIT chr19 11623871 - RGL3 chr19 11517540 - Exonic hg19 PRAD TCGA-CH-5744 9 16 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 42420 ChimerSeq STARFusion TCGA_RNA-Seq DCAF5-RDH11 DCAF5 chr14 69583083 - RDH11 chr14 68159769 - Exonic hg19 PRAD TCGA-CH-5744 6 25 In-Frame Intra-chr q24.1 q24.1 Seq+ 42421 ChimerSeq STARFusion TCGA_RNA-Seq PHF10-MLLT4 PHF10 chr6 170110332 - MLLT4 chr6 168325685 + Exonic hg19 PRAD TCGA-CH-5744 9 12 In-Frame Intra-chr q27 42422 ChimerSeq STARFusion TCGA_RNA-Seq COPA-STAC2 COPA chr1 160312921 - STAC2 chr17 37374426 - Exonic hg19 PRAD TCGA-CH-5745 11 54 Out-of-frame Inter-chr q23.2 q12 Seq+ 42423 ChimerSeq STARFusion TCGA_RNA-Seq RRP1B-FAM207A RRP1B chr21 45110321 + FAM207A chr21 46363599 + Exonic hg19 PRAD TCGA-CH-5745 4 64 In-Frame Intra-chr q22.3 q22.3 Seq+ 42424 ChimerSeq STARFusion TCGA_RNA-Seq FBXO42-RSG1 FBXO42 chr1 16678750 - RSG1 chr1 16560259 - Exonic hg19 PRAD TCGA-CH-5745 8 41 5'UTR-CDS Intra-chr p36.13 p36.13 Seq+ 42425 ChimerSeq STARFusion TCGA_RNA-Seq MLLT4-LINC00574 MLLT4 chr6 168291709 + LINC00574 chr6 170200927 + Exonic hg19 PRAD TCGA-CH-5745 5 36 CDS-5'UTR Intra-chr 42426 ChimerSeq STARFusion TCGA_RNA-Seq YTHDF2-ARSB YTHDF2 chr1 29070498 + ARSB chr5 78077797 - Exonic hg19 PRAD TCGA-CH-5745 7 26 Out-of-frame Inter-chr p35.3 q14.1 Seq+ 42427 ChimerSeq STARFusion TCGA_RNA-Seq IGF2R-MLLT4 IGF2R chr6 160390427 + MLLT4 chr6 168265231 + Exonic hg19 PRAD TCGA-CH-5745 4 4 Out-of-frame Intra-chr q25.3 Oncogene Tumor suppressor gene 42428 ChimerSeq STARFusion TCGA_RNA-Seq HIST4H4-LRP6 HIST4H4 chr12 14923613 - LRP6 chr12 12356334 - Exonic hg19 PRAD TCGA-CH-5748 7 21 3'UTR-CDS Intra-chr p12.3 Seq+ 42429 ChimerSeq STARFusion TCGA_RNA-Seq GTPBP4-KLK3 GTPBP4 chr10 1063879 + KLK3 chr19 51363227 + Exonic hg19 PRAD TCGA-HC-7750 30 1 Out-of-frame Inter-chr p15.3 Tumor suppressor gene q13.33 42430 ChimerSeq STARFusion TCGA_RNA-Seq KLK3-TMPRSS11A KLK3 chr19 51361851 + TMPRSS11A chr4 68777221 - Exonic hg19 PRAD TCGA-HC-7750 29 0 In-Frame Inter-chr q13.33 q13.2 Tumor suppressor gene 42431 ChimerSeq STARFusion TCGA_RNA-Seq RPL3-RARA RPL3 chr22 39711375 - RARA chr17 38498827 + Exonic hg19 PRAD TCGA-HC-7750 6 1 Out-of-frame Inter-chr q13.1 q21.2 Oncogene Transcription factor 42432 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 PRAD TCGA-HC-7752 4 4 In-Frame Intra-chr p13.3 p13.3 42433 ChimerSeq STARFusion TCGA_RNA-Seq PTAR1-ABHD17B PTAR1 chr9 72356708 - ABHD17B chr9 74477523 - Exonic hg19 PRAD TCGA-EJ-AB27 9 27 Out-of-frame Intra-chr q21.12 q21.13 Seq+ 42434 ChimerSeq STARFusion TCGA_RNA-Seq MYBPC1-NUPR1 MYBPC1 chr12 102030829 + NUPR1 chr16 28550434 - Exonic hg19 PRAD TCGA-J9-A52D 58 1 Out-of-frame Inter-chr q23.2 p11.2 Tumor suppressor gene 42435 ChimerSeq STARFusion TCGA_RNA-Seq KIF2A-RNF180 KIF2A chr5 61602363 + RNF180 chr5 63665442 + Exonic hg19 PRAD TCGA-J9-A52D 10 25 In-Frame Intra-chr q12.1 q12.3 Tumor suppressor gene Seq+ 42436 ChimerSeq STARFusion TCGA_RNA-Seq UGGT2-TRPC4 UGGT2 chr13 96675294 - TRPC4 chr13 38357497 - Exonic hg19 PRAD TCGA-J9-A52D 6 35 CDS-5'UTR Intra-chr q32.1 q13.3 Seq+ 42437 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM6-CWC27 ZSWIM6 chr5 60628775 + CWC27 chr5 64267530 + Exonic hg19 PRAD TCGA-J9-A52D 2 14 In-Frame Intra-chr q12.1 q12.3 Seq+ 42438 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM6-CWC27 ZSWIM6 chr5 60628775 + CWC27 chr5 64181270 + Exonic hg19 PRAD TCGA-J9-A52D 2 13 Out-of-frame Intra-chr q12.1 q12.3 Seq+ 42439 ChimerSeq STARFusion TCGA_RNA-Seq SRPK2-INTS4L1 SRPK2 chr7 105029095 - INTS4L1 chr7 64660996 + Exonic hg19 PRAD TCGA-EJ-A8FN 8 25 CDS-5'UTR Intra-chr q22.3 CMGC:SRPK 42440 ChimerSeq STARFusion TCGA_RNA-Seq SSBP1-PON1 SSBP1 chr7 141438210 + PON1 chr7 94947705 - Exonic hg19 PRAD TCGA-EJ-A8FN 8 3 5'UTR-CDS Intra-chr q21.3 Seq+ 42441 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-GUCA2A TMPRSS2 chr21 42880008 - GUCA2A chr1 42629281 - Exonic hg19 PRAD TCGA-KC-A4BR 106 120 5'UTR-CDS Inter-chr q22.3 p34.2 Seq+ 42442 ChimerSeq STARFusion TCGA_RNA-Seq GUCA2A-ERG GUCA2A chr1 42629074 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-KC-A4BR 41 62 Out-of-frame Inter-chr p34.2 q22.2 Oncogene Transcription factor Seq+ 42443 ChimerSeq STARFusion TCGA_RNA-Seq CYB561-PHB CYB561 chr17 61523606 - PHB chr17 47482566 - Exonic hg19 PRAD TCGA-J9-A52B 15 24 5'UTR-CDS Intra-chr q23.3 q21.33 Tumor suppressor gene Seq+ 42444 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHM1-NT5C3B PLEKHM1 chr17 43545575 - NT5C3B chr17 39985204 - Exonic hg19 PRAD TCGA-J9-A52B 2 13 Out-of-frame Intra-chr q21.2 Seq+ 42445 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2B-C9orf9 PRRC2B chr9 134269650 + C9orf9 chr9 135759298 + Exonic hg19 PRAD TCGA-HC-A8D0 6 6 5'UTR-5'UTR Intra-chr q34.13 42446 ChimerSeq STARFusion TCGA_RNA-Seq PER2-SEPT2 PER2 chr2 239154932 - SEPT2 chr2 242254985 + Exonic hg19 PRAD TCGA-HC-A8D0 3 14 Out-of-frame Intra-chr q37.3 Tumor suppressor gene q37.3 Seq+ 42447 ChimerSeq STARFusion TCGA_RNA-Seq STAT5B-PFAS STAT5B chr17 40362189 - PFAS chr17 8166238 + Exonic hg19 PRAD TCGA-HC-A8D0 4 9 In-Frame Intra-chr q21.2 Transcription factor p13.1 Seq+ 42448 ChimerSeq STARFusion TCGA_RNA-Seq CAMKK2-KDM2B CAMKK2 chr12 121708701 - KDM2B chr12 121891147 - Exonic hg19 PRAD TCGA-EJ-A65J 3 54 In-Frame Intra-chr q24.31 q24.31 Transcription factor Seq+ 42449 ChimerSeq STARFusion TCGA_RNA-Seq CAMKK2-KDM2B CAMKK2 chr12 121735342 - KDM2B chr12 121951205 - Exonic hg19 PRAD TCGA-EJ-A65J 2 52 5'UTR-CDS Intra-chr q24.31 q24.31 Transcription factor Seq+ 42450 ChimerSeq STARFusion TCGA_RNA-Seq CAMKK2-KDM2B CAMKK2 chr12 121735342 - KDM2B chr12 121891147 - Exonic hg19 PRAD TCGA-EJ-A65J 2 52 5'UTR-CDS Intra-chr q24.31 q24.31 Transcription factor Seq+ 42451 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP18-THEMIS ARHGAP18 chr6 130031169 - THEMIS chr6 128222226 - Exonic hg19 PRAD TCGA-EJ-A65J 5 20 CDS-5'UTR Intra-chr q22.33 Seq+ 42452 ChimerSeq STARFusion TCGA_RNA-Seq FRA10AC1-PDE6C FRA10AC1 chr10 95430527 - PDE6C chr10 95418658 + Exonic hg19 PRAD TCGA-EJ-A65J 4 15 In-Frame Intra-chr q23.33 q23.33 Seq+ 42453 ChimerSeq STARFusion TCGA_RNA-Seq ZFHX3-ENY2 ZFHX3 chr16 72845476 - ENY2 chr8 110355634 + Exonic hg19 PRAD TCGA-YL-A9WL 178 459 Out-of-frame Inter-chr q22.3 Tumor suppressor gene Transcription factor q23.1 Seq+ 42454 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF38-ZNF622 ARHGEF38 chr4 106474118 + ZNF622 chr5 16463851 - Exonic hg19 PRAD TCGA-YL-A9WL 17 62 In-Frame Inter-chr q24 p15.1 Seq+ 42455 ChimerSeq STARFusion TCGA_RNA-Seq URI1-WDR88 URI1 chr19 30433571 + WDR88 chr19 33655103 + Exonic hg19 PRAD TCGA-YL-A9WL 14 58 In-Frame Intra-chr q12 q13.11 Seq+ 42456 ChimerSeq STARFusion TCGA_RNA-Seq TP53-PFAS TP53 chr17 7590695 - PFAS chr17 8148815 + Exonic hg19 PRAD TCGA-YL-A9WL 11 45 5'UTR-5'UTR Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.1 42457 ChimerSeq STARFusion TCGA_RNA-Seq GAK-MEX3D GAK chr4 875695 - MEX3D chr19 1556922 - Exonic hg19 PRAD TCGA-YL-A9WL 14 30 Out-of-frame Inter-chr p16.3 Other:NAK p13.3 Seq+ 42458 ChimerSeq STARFusion TCGA_RNA-Seq URI1-WDR88 URI1 chr19 30433571 + WDR88 chr19 33663254 + Exonic hg19 PRAD TCGA-YL-A9WL 2 58 In-Frame Intra-chr q12 q13.11 Seq+ 42459 ChimerSeq STARFusion TCGA_RNA-Seq ENY2-NSF ENY2 chr8 110352792 + NSF chr17 44751780 + Exonic hg19 PRAD TCGA-YL-A9WL 7 14 In-Frame Inter-chr q23.1 Seq+ 42460 ChimerSeq STARFusion TCGA_RNA-Seq IL6ST-LAMC2 IL6ST chr5 55247292 - LAMC2 chr1 183177016 + Exonic hg19 PRAD TCGA-YL-A9WL 6 5 In-Frame Inter-chr q11.2 Oncogene q25.3 Seq+ 42461 ChimerSeq STARFusion TCGA_RNA-Seq SCD5-ANTXR2 SCD5 chr4 83719459 - ANTXR2 chr4 80940130 - Exonic hg19 PRAD TCGA-YL-A9WL 4 7 Out-of-frame Intra-chr q21.22 q21.21 Seq+ 42462 ChimerSeq STARFusion TCGA_RNA-Seq BIRC6-EML4 BIRC6 chr2 32774548 + EML4 chr2 42515367 + Exonic hg19 PRAD TCGA-YL-A9WL 2 9 Out-of-frame Intra-chr p22.3 p21 Oncogene Seq+ 42463 ChimerSeq STARFusion TCGA_RNA-Seq PCNP-ATR PCNP chr3 101298848 + ATR chr3 142185375 - Exonic hg19 PRAD TCGA-YL-A9WK 33 74 CDS-3'UTR Intra-chr q12.3 q23 Atypical:PIKK Oncogene Tumor suppressor gene Seq+ 42464 ChimerSeq STARFusion TCGA_RNA-Seq MIPOL1-KIAA0391 MIPOL1 chr14 37777724 + KIAA0391 chr14 35742641 + Exonic hg19 PRAD TCGA-YL-A9WK 4 14 In-Frame Intra-chr q13.3 q13.2 Seq+ 42465 ChimerSeq STARFusion TCGA_RNA-Seq MIPOL1-KIAA0391 MIPOL1 chr14 37777724 + KIAA0391 chr14 35742641 + Exonic hg19 PRAD TCGA-YL-A9WK 4 14 In-Frame Intra-chr q13.3 q13.2 Seq+ 42466 ChimerSeq STARFusion TCGA_RNA-Seq EHD1-BATF2 EHD1 chr11 64641893 - BATF2 chr11 64762021 - Exonic hg19 PRAD TCGA-YL-A9WK 2 7 Out-of-frame Intra-chr q13.1 q13.1 Tumor suppressor gene Transcription factor Seq+ 42467 ChimerSeq STARFusion TCGA_RNA-Seq DES-KLK3 DES chr2 220291308 + KLK3 chr19 51363860 + Exonic hg19 PRAD TCGA-EJ-A65M 3 4 Out-of-frame Inter-chr q35 q13.33 42468 ChimerSeq STARFusion TCGA_RNA-Seq RPL13-KLK3 RPL13 chr16 89629488 + KLK3 chr19 51363681 + Exonic hg19 PRAD TCGA-EJ-A65M 3 4 Out-of-frame Inter-chr q24.3 q13.33 42469 ChimerSeq STARFusion TCGA_RNA-Seq PPAPDC1B-TMEM66 PPAPDC1B chr8 38124785 - TMEM66 chr8 29927575 - Exonic hg19 PRAD TCGA-EJ-A65M 2 7 Out-of-frame Intra-chr Seq+ 42470 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G2-ZBED5 EIF4G2 chr11 10825717 - ZBED5 chr11 10871460 - Exonic hg19 PRAD TCGA-YL-A9WI 15 19 Out-of-frame Intra-chr p15.4 p15.4 Transcription factor 42471 ChimerSeq STARFusion TCGA_RNA-Seq ATP11A-DHRS12 ATP11A chr13 113516889 + DHRS12 chr13 52365393 - Exonic hg19 PRAD TCGA-YL-A8SQ 4 10 In-Frame Intra-chr q34 q14.3 Seq+ 42472 ChimerSeq STARFusion TCGA_RNA-Seq LINC00623-NOTCH2 LINC00623 chr1 144340526 - NOTCH2 chr1 120572610 - Exonic hg19 PRAD TCGA-YL-A8SQ 2 4 Out-of-frame Intra-chr p11.2 p12 Oncogene Tumor suppressor gene 42473 ChimerSeq STARFusion TCGA_RNA-Seq RPS17-CHAF1B RPS17 chr15 82822714 - CHAF1B chr21 37759896 + Exonic hg19 PRAD TCGA-KC-A4BN 6 19 3'UTR-CDS Inter-chr q25.2 q22.12 Seq+ 42474 ChimerSeq STARFusion TCGA_RNA-Seq ADRBK2-IGLL3P ADRBK2 chr22 26000420 + IGLL3P chr22 25714224 + Exonic hg19 PRAD TCGA-KC-A4BN 3 3 CDS-5'UTR Intra-chr q11.23 42475 ChimerSeq STARFusion TCGA_RNA-Seq LMBR1-PTPRN2 LMBR1 chr7 156549087 - PTPRN2 chr7 157396767 - Exonic hg19 PRAD TCGA-EJ-A8FU 8 39 In-Frame Intra-chr q36.3 q36.3 Seq+ 42476 ChimerSeq STARFusion TCGA_RNA-Seq MAP7-POLR2J3 MAP7 chr6 136686873 - POLR2J3 chr7 102210371 - Exonic hg19 PRAD TCGA-EJ-A65D 12 24 Out-of-frame Inter-chr q23.3 q22.1 42477 ChimerSeq STARFusion TCGA_RNA-Seq ERG-TMPRSS2 ERG chr21 39947586 - TMPRSS2 chr21 42852529 - Exonic hg19 PRAD TCGA-EJ-A65D 5 7 Out-of-frame Intra-chr q22.2 Oncogene Transcription factor q22.3 Seq+ 42478 ChimerSeq STARFusion TCGA_RNA-Seq KLK2-RPL13A KLK2 chr19 51378136 + RPL13A chr19 49994682 + Exonic hg19 PRAD TCGA-EJ-A65D 2 6 Out-of-frame Intra-chr q13.33 q13.33 42479 ChimerSeq STARFusion TCGA_RNA-Seq DUSP22-PTK7 DUSP22 chr6 348841 + PTK7 chr6 43106587 + Exonic hg19 PRAD TCGA-EJ-A65E 4 16 In-Frame Intra-chr p25.3 Tumor suppressor gene p21.1 Seq+ 42480 ChimerSeq STARFusion TCGA_RNA-Seq MAP7-CITED2 MAP7 chr6 136871480 - CITED2 chr6 139695767 - Exonic hg19 PRAD TCGA-EJ-A65F 9 43 CDS-5'UTR Intra-chr q23.3 q24.1 Tumor suppressor gene Seq+ 42481 ChimerSeq STARFusion TCGA_RNA-Seq MPZL1-DCAF6 MPZL1 chr1 167691479 + DCAF6 chr1 167935867 + Exonic hg19 PRAD TCGA-EJ-A65F 4 6 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 42482 ChimerSeq STARFusion TCGA_RNA-Seq KLK3-TMEM63B KLK3 chr19 51358260 + TMEM63B chr6 44116305 + Exonic hg19 PRAD TCGA-XK-AAJA 10 0 Out-of-frame Inter-chr q13.33 p21.1 42483 ChimerSeq STARFusion TCGA_RNA-Seq BCL2L14-GPR19 BCL2L14 chr12 12240320 + GPR19 chr12 12848445 - Exonic hg19 PRAD TCGA-XK-AAJA 2 22 CDS-5'UTR Intra-chr p13.1 Seq+ 42484 ChimerSeq STARFusion TCGA_RNA-Seq GALNT14-NRXN1 GALNT14 chr2 31360824 - NRXN1 chr2 50170929 - Exonic hg19 PRAD TCGA-XK-AAJA 3 10 In-Frame Intra-chr p23.1 p16.3 Seq+ 42485 ChimerSeq STARFusion TCGA_RNA-Seq SND1-FAM71F1 SND1 chr7 127484477 + FAM71F1 chr7 128349139 + Exonic hg19 PRAD TCGA-XK-AAJA 3 8 CDS-5'UTR Intra-chr q32.1 q32.1 42486 ChimerSeq STARFusion TCGA_RNA-Seq DYRK1A-KCNJ6 DYRK1A chr21 38792686 + KCNJ6 chr21 39087434 - Exonic hg19 PRAD TCGA-XK-AAJA 3 7 In-Frame Intra-chr q22.13 CMGC:DYRK q22.13 Seq+ 42487 ChimerSeq STARFusion TCGA_RNA-Seq PRKCE-QPCT PRKCE chr2 45879587 + QPCT chr2 37579932 + Exonic hg19 PRAD TCGA-XK-AAJA 2 11 In-Frame Intra-chr p21 Tumor suppressor gene p22.2 Seq+ 42488 ChimerSeq STARFusion TCGA_RNA-Seq GSK3B-PLA1A GSK3B chr3 119624602 - PLA1A chr3 119347548 + Exonic hg19 PRAD TCGA-XK-AAJA 2 9 Out-of-frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q13.33 Seq+ 42489 ChimerSeq STARFusion TCGA_RNA-Seq STX18-ZFAND6 STX18 chr4 4421033 - ZFAND6 chr15 80430376 + Exonic hg19 PRAD TCGA-KK-A59V 4 2 Out-of-frame Inter-chr p16.2 q25.1 42490 ChimerSeq STARFusion TCGA_RNA-Seq URI1-ZNF536 URI1 chr19 30433571 + ZNF536 chr19 30934468 + Exonic hg19 PRAD TCGA-XK-AAJP 7 9 5'UTR-5'UTR Intra-chr q12 q12 Transcription factor 42491 ChimerSeq STARFusion TCGA_RNA-Seq NCKAP5-MZT2A NCKAP5 chr2 134060609 - MZT2A chr2 132241791 - Exonic hg19 PRAD TCGA-KK-A59X 2 35 Out-of-frame Intra-chr q21.2 q21.1 Seq+ 42492 ChimerSeq STARFusion TCGA_RNA-Seq DLG1-CRYBG3 DLG1 chr3 196921296 - CRYBG3 chr3 97631011 + Exonic hg19 PRAD TCGA-KK-A59X 4 13 Out-of-frame Intra-chr q29 Tumor suppressor gene q11.2 Seq+ 42493 ChimerSeq STARFusion TCGA_RNA-Seq DLG1-CRYBG3 DLG1 chr3 196888511 - CRYBG3 chr3 97631011 + Exonic hg19 PRAD TCGA-KK-A59X 2 13 Out-of-frame Intra-chr q29 Tumor suppressor gene q11.2 Seq+ 42494 ChimerSeq STARFusion TCGA_RNA-Seq THSD7B-DARS THSD7B chr2 137523257 + DARS chr2 136741024 - Exonic hg19 PRAD TCGA-KK-A59X 4 4 5'UTR-CDS Intra-chr q22.1 q21.3 Seq+ 42495 ChimerSeq STARFusion TCGA_RNA-Seq PCYT1A-EPHA6 PCYT1A chr3 196014403 - EPHA6 chr3 97123994 + Exonic hg19 PRAD TCGA-KK-A59X 2 6 5'UTR-CDS Intra-chr q29 q11.2 Seq+ 42496 ChimerSeq STARFusion TCGA_RNA-Seq ARGLU1-CXCR4 ARGLU1 chr13 107219921 - CXCR4 chr2 136873482 - Exonic hg19 PRAD TCGA-KK-A59X 2 4 Out-of-frame Inter-chr q33.3 q22.1 Seq+ 42497 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-TMEFF2 TMPRSS2 chr21 42852403 - TMEFF2 chr2 192863934 - Exonic hg19 PRAD TCGA-KK-A59Y 22 70 In-Frame Inter-chr q22.3 q32.3 Tumor suppressor gene Seq+ 42498 ChimerSeq STARFusion TCGA_RNA-Seq NAALADL2-CCDC39 NAALADL2 chr3 174158822 + CCDC39 chr3 180397587 - Exonic hg19 PRAD TCGA-KK-A59Y 4 5 Out-of-frame Intra-chr q26.31 q26.33 Seq+ 42499 ChimerSeq STARFusion TCGA_RNA-Seq PPAP2A-DIAPH1 PPAP2A chr5 54830400 - DIAPH1 chr5 140966764 - Exonic hg19 PRAD TCGA-KK-A59Y 3 5 Out-of-frame Intra-chr q31.3 42500 ChimerSeq STARFusion TCGA_RNA-Seq RBM6-DAG1 RBM6 chr3 50091828 + DAG1 chr3 49572105 + Exonic hg19 PRAD TCGA-ZG-A9KY 14 62 CDS-3'UTR Intra-chr p21.31 Tumor suppressor gene p21.31 42501 ChimerSeq STARFusion TCGA_RNA-Seq CCDC22-KRBOX4 CCDC22 chrX 49099928 + KRBOX4 chrX 46309866 + Exonic hg19 PRAD TCGA-ZG-A9KY 10 29 Out-of-frame Intra-chr p11.23 p11.3 Seq+ 42502 ChimerSeq STARFusion TCGA_RNA-Seq CHD6-PTPRT CHD6 chr20 40246979 - PTPRT chr20 40877462 - Exonic hg19 PRAD TCGA-ZG-A9KY 15 8 5'UTR-CDS Intra-chr q12 q13.11 Oncogene Tumor suppressor gene Seq+ 42503 ChimerSeq STARFusion TCGA_RNA-Seq MAST2-ST3GAL3 MAST2 chr1 46348067 + ST3GAL3 chr1 44365213 + Exonic hg19 PRAD TCGA-ZG-A9KY 9 28 In-Frame Intra-chr p34.1 AGC:MAST p34.1 Seq+ 42504 ChimerSeq STARFusion TCGA_RNA-Seq AKT3-ADSS AKT3 chr1 244006427 - ADSS chr1 244601070 - Exonic hg19 PRAD TCGA-ZG-A9KY 9 26 CDS-5'UTR Intra-chr AGC:Akt Oncogene q44 Seq+ 42505 ChimerSeq STARFusion TCGA_RNA-Seq GSK3B-SEMA5B GSK3B chr3 119582266 - SEMA5B chr3 122667556 - Exonic hg19 PRAD TCGA-ZG-A9KY 6 38 In-Frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q21.1 Seq+ 42506 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM2-ANKRD24 R3HDM2 chr12 57789532 - ANKRD24 chr19 4212472 + Exonic hg19 PRAD TCGA-ZG-A9KY 10 22 5'UTR-CDS Inter-chr q13.3 p13.3 Seq+ 42507 ChimerSeq STARFusion TCGA_RNA-Seq WDR70-RAI14 WDR70 chr5 37516692 + RAI14 chr5 34796044 + Exonic hg19 PRAD TCGA-ZG-A9KY 10 14 In-Frame Intra-chr p13.2 p13.2 Seq+ 42508 ChimerSeq STARFusion TCGA_RNA-Seq GSK3B-SEMA5B GSK3B chr3 119582266 - SEMA5B chr3 122680148 - Exonic hg19 PRAD TCGA-ZG-A9KY 4 37 In-Frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q21.1 Seq+ 42509 ChimerSeq STARFusion TCGA_RNA-Seq MAGI1-SUCLG2 MAGI1 chr3 66023671 - SUCLG2 chr3 67451275 - Exonic hg19 PRAD TCGA-ZG-A9KY 6 26 Out-of-frame Intra-chr Oncogene p14.1 Seq+ 42510 ChimerSeq STARFusion TCGA_RNA-Seq KDM4B-ATCAY KDM4B chr19 5047680 + ATCAY chr19 3902485 + Exonic hg19 PRAD TCGA-ZG-A9KY 5 18 In-Frame Intra-chr p13.3 p13.3 Seq+ 42511 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-CA4 BCAS3 chr17 59001861 + CA4 chr17 58247912 + Exonic hg19 PRAD TCGA-ZG-A9KY 6 12 CDS-3'UTR Intra-chr q23.2 q23.1 Seq+ 42512 ChimerSeq STARFusion TCGA_RNA-Seq MAST2-ST3GAL3 MAST2 chr1 46348067 + ST3GAL3 chr1 44386076 + Exonic hg19 PRAD TCGA-ZG-A9KY 2 28 Out-of-frame Intra-chr p34.1 AGC:MAST p34.1 Seq+ 42513 ChimerSeq STARFusion TCGA_RNA-Seq FAF1-TTC39A FAF1 chr1 51121114 - TTC39A chr1 51761842 - Exonic hg19 PRAD TCGA-ZG-A9KY 4 18 In-Frame Intra-chr p32.3 p32.3 Seq+ 42514 ChimerSeq STARFusion TCGA_RNA-Seq CCDC57-RAB40B CCDC57 chr17 80109436 - RAB40B chr17 80622432 - Exonic hg19 PRAD TCGA-ZG-A9KY 4 14 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 42515 ChimerSeq STARFusion TCGA_RNA-Seq DTX2-POR DTX2 chr7 76093026 + POR chr7 75583307 + Exonic hg19 PRAD TCGA-ZG-A9KY 6 5 5'UTR-5'UTR Intra-chr q11.23 Seq+ 42516 ChimerSeq STARFusion TCGA_RNA-Seq EME2-CLUAP1 EME2 chr16 1830668 + CLUAP1 chr16 3580568 + Exonic hg19 PRAD TCGA-ZG-A9KY 4 10 3'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 42517 ChimerSeq STARFusion TCGA_RNA-Seq BRCA1-LSM12 BRCA1 chr17 41267743 - LSM12 chr17 42113668 - Exonic hg19 PRAD TCGA-ZG-A9KY 3 7 Out-of-frame Intra-chr q21.31 Oncogene Tumor suppressor gene q21.31 Seq+ 42518 ChimerSeq STARFusion TCGA_RNA-Seq EME2-CLUAP1 EME2 chr16 1826340 + CLUAP1 chr16 3580568 + Exonic hg19 PRAD TCGA-ZG-A9KY 2 9 3'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 42519 ChimerSeq STARFusion TCGA_RNA-Seq GABRB3-TJP1 GABRB3 chr15 27017549 - TJP1 chr15 30092905 - Exonic hg19 PRAD TCGA-ZG-A9KY 2 7 In-Frame Intra-chr q12 Seq+ 42520 ChimerSeq STARFusion TCGA_RNA-Seq SLC9A3R1-FBXO18 SLC9A3R1 chr17 72745426 + FBXO18 chr10 5978419 + Exonic hg19 PRAD TCGA-EJ-7318 10 31 In-Frame Inter-chr q25.1 Tumor suppressor gene p15.1 Seq+ 42521 ChimerSeq STARFusion TCGA_RNA-Seq VIPAS39-CCDC176 VIPAS39 chr14 77900185 - CCDC176 chr14 74544899 + Exonic hg19 PRAD TCGA-EJ-7318 3 12 Out-of-frame Intra-chr q24.3 42522 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-GRHL2 TMPRSS2 chr21 42861434 - GRHL2 chr8 102564943 + Exonic hg19 PRAD TCGA-EJ-7314 33 310 Out-of-frame Inter-chr q22.3 q22.3 Transcription factor Seq+ 42523 ChimerSeq STARFusion TCGA_RNA-Seq NDRG1-ERG NDRG1 chr8 134292478 - ERG chr21 39817547 - Exonic hg19 PRAD TCGA-EJ-7314 47 230 Out-of-frame Inter-chr q24.22 Tumor suppressor gene q22.2 Oncogene Transcription factor KB Pub Seq+ 42524 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-GRHL2 TMPRSS2 chr21 42860321 - GRHL2 chr8 102564943 + Exonic hg19 PRAD TCGA-EJ-7314 18 308 Out-of-frame Inter-chr q22.3 q22.3 Transcription factor Seq+ 42525 ChimerSeq STARFusion TCGA_RNA-Seq IDE-CAMK1D IDE chr10 94243012 - CAMK1D chr10 12802947 + Exonic hg19 PRAD TCGA-EJ-7314 3 16 In-Frame Intra-chr q23.33 p13 Seq+ 42526 ChimerSeq STARFusion TCGA_RNA-Seq ANTXR2-PCAT4 ANTXR2 chr4 80952777 - PCAT4 chr4 80782444 + Exonic hg19 PRAD TCGA-EJ-7312 158 295 Out-of-frame Intra-chr q21.21 q21.21 Seq+ 42527 ChimerSeq STARFusion TCGA_RNA-Seq RNF219-MLLT10P1 RNF219 chr13 79233184 - MLLT10P1 chr20 29638054 - Exonic hg19 PRAD TCGA-EJ-7312 9 24 CDS-3'UTR Inter-chr q31.1 q11.21 42528 ChimerSeq STARFusion TCGA_RNA-Seq SLC30A6-ACTR2 SLC30A6 chr2 32399216 + ACTR2 chr2 65492177 + Exonic hg19 PRAD TCGA-EJ-7312 6 11 Out-of-frame Intra-chr p22.3 p14 TKL:STKR Seq+ 42529 ChimerSeq STARFusion TCGA_RNA-Seq TIE1-TSPAN9 TIE1 chr1 43777983 + TSPAN9 chr12 3394589 + Exonic hg19 PRAD TCGA-EJ-7312 6 0 Out-of-frame Inter-chr p34.2 TK:Tie p13.33 42530 ChimerSeq STARFusion TCGA_RNA-Seq DDX23-SLC25A10 DDX23 chr12 49229310 - SLC25A10 chr17 79684818 + Exonic hg19 PRAD TCGA-X4-A8KQ 7 41 Out-of-frame Inter-chr q13.12 q25.3 Seq+ 42531 ChimerSeq STARFusion TCGA_RNA-Seq SLC11A2-CDC27 SLC11A2 chr12 51420098 - CDC27 chr17 45206887 - Exonic hg19 PRAD TCGA-X4-A8KQ 5 3 5'UTR-CDS Inter-chr q13.12 q21.32 Seq+ 42532 ChimerSeq STARFusion TCGA_RNA-Seq GRHL2-NCALD GRHL2 chr8 102631925 + NCALD chr8 102928086 - Exonic hg19 PRAD TCGA-YL-A8SP 10 41 CDS-5'UTR Intra-chr q22.3 Transcription factor q22.3 Seq+ 42533 ChimerSeq STARFusion TCGA_RNA-Seq KMT2C-FUT9 KMT2C chr7 151949024 - FUT9 chr6 96651024 + Exonic hg19 PRAD TCGA-YL-A8SP 4 17 Out-of-frame Inter-chr q36.1 Oncogene Tumor suppressor gene q16.1 Seq+ 42534 ChimerSeq STARFusion TCGA_RNA-Seq UBE2N-APPL2 UBE2N chr12 93835631 - APPL2 chr12 105623001 - Exonic hg19 PRAD TCGA-YL-A8SP 2 6 In-Frame Intra-chr q22 q23.3 Seq+ 42535 ChimerSeq STARFusion TCGA_RNA-Seq PRKCB-RPS2 PRKCB chr16 24135302 + RPS2 chr16 2013257 - Exonic hg19 PRAD TCGA-KK-A8I7 3 4 In-Frame Intra-chr p12.2 Tumor suppressor gene p13.3 42536 ChimerSeq STARFusion TCGA_RNA-Seq NDRG1-ERG NDRG1 chr8 134292478 - ERG chr21 39817547 - Exonic hg19 PRAD TCGA-KK-A8I6 49 145 Out-of-frame Inter-chr q24.22 Tumor suppressor gene q22.2 Oncogene Transcription factor KB Pub Seq+ 42537 ChimerSeq STARFusion TCGA_RNA-Seq EDEM1-GPD1L EDEM1 chr3 5229999 + GPD1L chr3 32169568 + Exonic hg19 PRAD TCGA-KK-A8I6 9 40 In-Frame Intra-chr p26.1 p22.3 Seq+ 42538 ChimerSeq STARFusion TCGA_RNA-Seq ZNF704-TBC1D3 ZNF704 chr8 81733609 - TBC1D3 chr17 36347082 - Exonic hg19 PRAD TCGA-KK-A8I6 8 21 CDS-3'UTR Inter-chr q21.13 Transcription factor q12 42539 ChimerSeq STARFusion TCGA_RNA-Seq NSA2-FIS1 NSA2 chr5 74069885 + FIS1 chr7 100884187 - Exonic hg19 PRAD TCGA-KK-A8I6 6 22 In-Frame Inter-chr q13.3 q22.1 Seq+ 42540 ChimerSeq STARFusion TCGA_RNA-Seq RASEF-OSTF1 RASEF chr9 85605306 - OSTF1 chr9 77732420 + Exonic hg19 PRAD TCGA-KK-A8I6 5 13 Out-of-frame Intra-chr q21.32 q21.13 Seq+ 42541 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649522 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-KK-A8I5 21 133 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 42542 ChimerSeq STARFusion TCGA_RNA-Seq CRYL1-GJB6 CRYL1 chr13 21063509 - GJB6 chr13 20797634 - Exonic hg19 PRAD TCGA-KK-A8I5 13 45 CDS-5'UTR Intra-chr q12.11 q12.11 Seq+ 42543 ChimerSeq STARFusion TCGA_RNA-Seq NOP14-CDK18 NOP14 chr4 2964852 - CDK18 chr1 205492275 + Exonic hg19 PRAD TCGA-KK-A8I5 8 9 CDS-5'UTR Inter-chr p16.3 q32.1 Seq+ 42544 ChimerSeq STARFusion TCGA_RNA-Seq TET2-LARP7 TET2 chr4 106068136 + LARP7 chr4 113565824 + Exonic hg19 PRAD TCGA-KK-A8I5 4 15 5'UTR-5'UTR Intra-chr q24 Oncogene Tumor suppressor gene Transcription factor q25 Seq+ 42545 ChimerSeq STARFusion TCGA_RNA-Seq TMEM66-TNKS TMEM66 chr8 29940363 - TNKS chr8 9537461 + Exonic hg19 PRAD TCGA-KK-A8I5 3 3 In-Frame Intra-chr p23.1 Seq+ 42546 ChimerSeq STARFusion TCGA_RNA-Seq RNF19A-FAM177A1 RNF19A chr8 101322095 - FAM177A1 chr14 35571887 + Exonic hg19 PRAD TCGA-KK-A8I4 27 47 5'UTR-3'UTR Inter-chr q22.2 q13.2 Seq+ 42547 ChimerSeq STARFusion TCGA_RNA-Seq PHF3-R3HCC1 PHF3 chr6 64346055 + R3HCC1 chr8 23146019 + Exonic hg19 PRAD TCGA-KK-A8I4 19 58 5'UTR-5'UTR Inter-chr q12 p21.3 Seq+ 42548 ChimerSeq STARFusion TCGA_RNA-Seq PHF3-R3HCC1 PHF3 chr6 64356700 + R3HCC1 chr8 23146019 + Exonic hg19 PRAD TCGA-KK-A8I4 6 58 CDS-5'UTR Inter-chr q12 p21.3 Seq+ 42549 ChimerSeq STARFusion TCGA_RNA-Seq TRAF3IP2-KIAA1324 TRAF3IP2 chr6 111896846 - KIAA1324 chr1 109727667 + Exonic hg19 PRAD TCGA-KK-A8I4 2 8 In-Frame Inter-chr q21 p13.3 Seq+ 42550 ChimerSeq STARFusion TCGA_RNA-Seq APBA1-RAD23B APBA1 chr9 72287069 - RAD23B chr9 110068660 + Exonic hg19 PRAD TCGA-KK-A8I9 5 5 5'UTR-CDS Intra-chr q21.12 q31.2 Tumor suppressor gene Seq+ 42551 ChimerSeq STARFusion TCGA_RNA-Seq C12orf29-IRAK4 C12orf29 chr12 88429515 + IRAK4 chr12 44161906 + Exonic hg19 PRAD TCGA-KK-A8I8 7 22 CDS-5'UTR Intra-chr q21.32 q12 TKL:IRAK Seq+ 42552 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPU-SLC36A4 HNRNPU chr1 245021313 - SLC36A4 chr11 92918980 - Exonic hg19 PRAD TCGA-KK-A8I8 3 9 Out-of-frame Inter-chr q44 q21 Seq+ 42553 ChimerSeq STARFusion TCGA_RNA-Seq CHD9-CASC16 CHD9 chr16 53321926 + CASC16 chr16 52624979 - Exonic hg19 PRAD TCGA-KK-A8IG 3 12 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 42554 ChimerSeq STARFusion TCGA_RNA-Seq GABRG3-NBPF22P GABRG3 chr15 27725933 + NBPF22P chr5 85578549 + Exonic hg19 PRAD TCGA-KK-A8IF 7 12 CDS-5'UTR Inter-chr q12 q14.3 Seq+ 42555 ChimerSeq STARFusion TCGA_RNA-Seq TPD52L1-SAMD3 TPD52L1 chr6 125475116 + SAMD3 chr6 130634238 - Exonic hg19 PRAD TCGA-KK-A8IF 2 13 CDS-5'UTR Intra-chr q22.31 q23.1 Seq+ 42556 ChimerSeq STARFusion TCGA_RNA-Seq SF3A2-AZU1 SF3A2 chr19 2243543 + AZU1 chr19 828230 + Exonic hg19 PRAD TCGA-KK-A8ID 24 248 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 42557 ChimerSeq STARFusion TCGA_RNA-Seq SF3A2-AZU1 SF3A2 chr19 2243572 + AZU1 chr19 828230 + Exonic hg19 PRAD TCGA-KK-A8ID 15 237 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 42558 ChimerSeq STARFusion TCGA_RNA-Seq SDK1-CHST12 SDK1 chr7 3861215 + CHST12 chr7 2472198 + Exonic hg19 PRAD TCGA-KK-A8ID 8 32 CDS-5'UTR Intra-chr p22.2 p22.3 Seq+ 42559 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0247-SMOC1 KIAA0247 chr14 70125430 + SMOC1 chr14 70330879 + Exonic hg19 PRAD TCGA-KK-A8ID 4 33 CDS-5'UTR Intra-chr q24.2 42560 ChimerSeq STARFusion TCGA_RNA-Seq FAXC-ASCC3 FAXC chr6 99796983 - ASCC3 chr6 100988263 - Exonic hg19 PRAD TCGA-KK-A8ID 6 13 Out-of-frame Intra-chr q16.2 q16.3 Seq+ 42561 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A1-HRSP12 SLC7A1 chr13 30104675 - HRSP12 chr8 99120979 - Exonic hg19 PRAD TCGA-KK-A8ID 5 16 In-Frame Inter-chr q12.3 Seq+ 42562 ChimerSeq STARFusion TCGA_RNA-Seq SLC35C2-B4GALT5 SLC35C2 chr20 44993010 - B4GALT5 chr20 48273239 - Exonic hg19 PRAD TCGA-KK-A8ID 8 3 5'UTR-CDS Intra-chr q13.12 q13.13 Seq+ 42563 ChimerSeq STARFusion TCGA_RNA-Seq FOXP4-DNAH8 FOXP4 chr6 41514605 + DNAH8 chr6 38950122 + Exonic hg19 PRAD TCGA-KK-A8ID 7 4 5'UTR-CDS Intra-chr p21.1 Oncogene Transcription factor p21.2 Seq+ 42564 ChimerSeq STARFusion TCGA_RNA-Seq TMC6-UACA TMC6 chr17 76118686 - UACA chr15 70970545 - Exonic hg19 PRAD TCGA-KK-A8ID 5 11 In-Frame Inter-chr q25.3 q23 Seq+ 42565 ChimerSeq STARFusion TCGA_RNA-Seq RPTOR-IQCH RPTOR chr17 78829347 + IQCH chr15 67692452 + Exonic hg19 PRAD TCGA-KK-A8ID 2 22 In-Frame Inter-chr q25.3 q23 Seq+ 42566 ChimerSeq STARFusion TCGA_RNA-Seq RABEP1-MINK1 RABEP1 chr17 5281527 + MINK1 chr17 4781612 + Exonic hg19 PRAD TCGA-KK-A8ID 3 16 In-Frame Intra-chr p13.2 p13.2 Seq+ 42567 ChimerSeq STARFusion TCGA_RNA-Seq CTDSPL2-CASC4 CTDSPL2 chr15 44719970 + CASC4 chr15 44581357 + Exonic hg19 PRAD TCGA-KK-A8ID 3 14 5'UTR-CDS Intra-chr q15.3 q15.3 Seq+ 42568 ChimerSeq STARFusion TCGA_RNA-Seq TFCP2-RNF41 TFCP2 chr12 51566384 - RNF41 chr12 56610397 - Exonic hg19 PRAD TCGA-KK-A8ID 3 10 5'UTR-5'UTR Intra-chr q13.13 Transcription factor q13.3 Seq+ 42569 ChimerSeq STARFusion TCGA_RNA-Seq CRYL1-GJA3 CRYL1 chr13 21006241 - GJA3 chr13 20717444 - Exonic hg19 PRAD TCGA-KK-A8ID 2 11 CDS-5'UTR Intra-chr q12.11 q12.11 Seq+ 42570 ChimerSeq STARFusion TCGA_RNA-Seq PDE9A-SLC37A1 PDE9A chr21 44174174 + SLC37A1 chr21 43922406 + Exonic hg19 PRAD TCGA-KK-A8ID 3 6 CDS-5'UTR Intra-chr q22.3 q22.3 Seq+ 42571 ChimerSeq STARFusion TCGA_RNA-Seq TFCP2-RNF41 TFCP2 chr12 51566084 - RNF41 chr12 56610397 - Exonic hg19 PRAD TCGA-KK-A8ID 2 10 CDS-5'UTR Intra-chr q13.13 Transcription factor q13.3 Seq+ 42572 ChimerSeq STARFusion TCGA_RNA-Seq NRG3-LINC00856 NRG3 chr10 83635919 + LINC00856 chr10 80285087 + Exonic hg19 PRAD TCGA-KK-A8ID 2 9 Out-of-frame Intra-chr q23.1 q22.3 42573 ChimerSeq STARFusion TCGA_RNA-Seq PTK7-VEGFA PTK7 chr6 43044305 + VEGFA chr6 43742078 + Exonic hg19 PRAD TCGA-KK-A8ID 2 9 Out-of-frame Intra-chr p21.1 p21.1 Tumor suppressor gene Seq+ 42574 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-RASL11A VPS13B chr8 100733275 + RASL11A chr13 27845621 + Exonic hg19 PRAD TCGA-KK-A8ID 2 8 Out-of-frame Inter-chr q22.2 q12.2 Tumor suppressor gene Seq+ 42575 ChimerSeq STARFusion TCGA_RNA-Seq C5orf45-RNF130 C5orf45 chr5 179268907 - RNF130 chr5 179440311 - Exonic hg19 PRAD TCGA-KK-A8ID 2 7 Out-of-frame Intra-chr q35.3 Seq+ 42576 ChimerSeq STARFusion TCGA_RNA-Seq LRIG1-SUCLG2 LRIG1 chr3 66501983 - SUCLG2 chr3 67451275 - Exonic hg19 PRAD TCGA-KK-A8ID 2 7 Out-of-frame Intra-chr Tumor suppressor gene p14.1 Seq+ 42577 ChimerSeq STARFusion TCGA_RNA-Seq REV3L-LAMA4 REV3L chr6 111803953 - LAMA4 chr6 112466135 - Exonic hg19 PRAD TCGA-KK-A8ID 2 6 In-Frame Intra-chr q21 q21 Seq+ 42578 ChimerSeq STARFusion TCGA_RNA-Seq TP53-FARP2 TP53 chr17 7590695 - FARP2 chr2 242312499 + Exonic hg19 PRAD TCGA-KK-A8IC 10 29 5'UTR-5'UTR Inter-chr p13.1 Oncogene Tumor suppressor gene Transcription factor q37.3 Seq+ 42579 ChimerSeq STARFusion TCGA_RNA-Seq MBTD1-SYBU MBTD1 chr17 49284249 - SYBU chr8 110631268 - Exonic hg19 PRAD TCGA-KK-A8IC 4 16 In-Frame Inter-chr q21.33 q23.2 Seq+ 42580 ChimerSeq STARFusion TCGA_RNA-Seq MRC2-PHYHIPL MRC2 chr17 60705281 + PHYHIPL chr10 61004817 + Exonic hg19 PRAD TCGA-KK-A8IC 4 15 Out-of-frame Inter-chr q23.2 q21.1 Seq+ 42581 ChimerSeq STARFusion TCGA_RNA-Seq OGT-POLA1 OGT chrX 70757922 + POLA1 chrX 24828015 + Exonic hg19 PRAD TCGA-KK-A8IC 3 5 In-Frame Intra-chr q13.1 p22.11 Seq+ 42582 ChimerSeq STARFusion TCGA_RNA-Seq WDTC1-CYP4Z2P WDTC1 chr1 27589726 + CYP4Z2P chr1 47366022 - Exonic hg19 PRAD TCGA-KK-A8IC 3 4 CDS-3'UTR Intra-chr p36.11 p33 42583 ChimerSeq STARFusion TCGA_RNA-Seq PRKDC-UBE2V2 PRKDC chr8 48866180 - UBE2V2 chr8 48955593 + Exonic hg19 PRAD TCGA-KK-A8IB 3 9 In-Frame Intra-chr q11.21 Oncogene q11.21 Seq+ 42584 ChimerSeq STARFusion TCGA_RNA-Seq PHKA2-GPR64 PHKA2 chrX 19001973 - GPR64 chrX 19018078 - Exonic hg19 PRAD TCGA-KK-A8IA 17 34 Out-of-frame Intra-chr p22.13 42585 ChimerSeq STARFusion TCGA_RNA-Seq HKR1-CHMP2A HKR1 chr19 37826159 + CHMP2A chr19 59063552 - Exonic hg19 PRAD TCGA-KK-A8IA 3 6 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.43 Seq+ 42586 ChimerSeq STARFusion TCGA_RNA-Seq DSTN-MYO5C DSTN chr20 17550856 + MYO5C chr15 52548917 - Exonic hg19 PRAD TCGA-KK-A8IM 2 27 Out-of-frame Inter-chr p12.1 q21.2 Seq+ 42587 ChimerSeq STARFusion TCGA_RNA-Seq DSTN-MYO5C DSTN chr20 17550856 + MYO5C chr15 52553324 - Exonic hg19 PRAD TCGA-KK-A8IM 2 27 In-Frame Inter-chr p12.1 q21.2 Seq+ 42588 ChimerSeq STARFusion TCGA_RNA-Seq TMEM68-ZNF821 TMEM68 chr8 56685828 - ZNF821 chr16 71913926 - Exonic hg19 PRAD TCGA-KK-A8IM 5 11 5'UTR-5'UTR Inter-chr q12.1 q22.2 Transcription factor Seq+ 42589 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A3-SKIL SLC45A3 chr1 205649522 - SKIL chr3 170077487 + Exonic hg19 PRAD TCGA-KK-A8IL 5 68 5'UTR-5'UTR Inter-chr q32.1 q26.2 Tumor suppressor gene Transcription factor Seq+ 42590 ChimerSeq STARFusion TCGA_RNA-Seq AKT3-PPP2R2A AKT3 chr1 244006427 - PPP2R2A chr8 26211984 + Exonic hg19 PRAD TCGA-KK-A8IL 3 23 Out-of-frame Inter-chr AGC:Akt Oncogene p21.2 Seq+ 42591 ChimerSeq STARFusion TCGA_RNA-Seq NEDD4L-MORC3 NEDD4L chr18 55833093 + MORC3 chr21 37728918 + Exonic hg19 PRAD TCGA-KK-A8IL 5 7 In-Frame Inter-chr q21.31 Tumor suppressor gene q22.12 Seq+ 42592 ChimerSeq STARFusion TCGA_RNA-Seq MAP4K3-TMEM178A MAP4K3 chr2 39513993 - TMEM178A chr2 39934189 + Exonic hg19 PRAD TCGA-KK-A8IL 2 8 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 42593 ChimerSeq STARFusion TCGA_RNA-Seq PDS5B-CRYBB1 PDS5B chr13 33160730 + CRYBB1 chr22 27012302 - Exonic hg19 PRAD TCGA-KK-A8IJ 47 123 5'UTR-5'UTR Inter-chr q13.1 Tumor suppressor gene q12.1 Seq+ 42594 ChimerSeq STARFusion TCGA_RNA-Seq PDS5B-CRYBB1 PDS5B chr13 33160730 + CRYBB1 chr22 27008154 - Exonic hg19 PRAD TCGA-KK-A8IJ 20 122 5'UTR-CDS Inter-chr q13.1 Tumor suppressor gene q12.1 Seq+ 42595 ChimerSeq STARFusion TCGA_RNA-Seq RB1CC1-PTPN3 RB1CC1 chr8 53580581 - PTPN3 chr9 112153841 - Exonic hg19 PRAD TCGA-KK-A8IJ 11 51 In-Frame Inter-chr q11.23 Tumor suppressor gene q31.3 Seq+ 42596 ChimerSeq STARFusion TCGA_RNA-Seq SPTBN1-ECI2 SPTBN1 chr2 54826380 + ECI2 chr6 4133935 - Exonic hg19 PRAD TCGA-KK-A8II 23 148 CDS-5'UTR Inter-chr p16.2 Tumor suppressor gene p25.2 Seq+ 42597 ChimerSeq STARFusion TCGA_RNA-Seq SPTBN1-ECI2 SPTBN1 chr2 54826380 + ECI2 chr6 4133945 - Exonic hg19 PRAD TCGA-KK-A8II 6 145 Out-of-frame Inter-chr p16.2 Tumor suppressor gene p25.2 Seq+ 42598 ChimerSeq STARFusion TCGA_RNA-Seq MAGI1-TBC1D30 MAGI1 chr3 66023671 - TBC1D30 chr12 65221615 + Exonic hg19 PRAD TCGA-KK-A8II 3 20 In-Frame Inter-chr Oncogene q14.3 Seq+ 42599 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP32-CWF19L2 ARHGAP32 chr11 128932175 - CWF19L2 chr11 107326502 - Exonic hg19 PRAD TCGA-KK-A8II 4 8 In-Frame Intra-chr q24.3 q22.3 Seq+ 42600 ChimerSeq STARFusion TCGA_RNA-Seq XRCC5-ACADL XRCC5 chr2 217059709 + ACADL chr2 211060062 - Exonic hg19 PRAD TCGA-KK-A8IH 3 88 In-Frame Intra-chr q35 Tumor suppressor gene q34 Seq+ 42601 ChimerSeq STARFusion TCGA_RNA-Seq CUEDC1-ROPN1 CUEDC1 chr17 56032586 - ROPN1 chr3 123694387 - Exonic hg19 PRAD TCGA-KK-A8IH 8 8 5'UTR-CDS Inter-chr q22 q21.1 42602 ChimerSeq STARFusion TCGA_RNA-Seq CHCHD3-EXOC4 CHCHD3 chr7 132523159 - EXOC4 chr7 133502078 + Exonic hg19 PRAD TCGA-KK-A8IH 6 15 In-Frame Intra-chr q33 Transcription factor q33 42603 ChimerSeq STARFusion TCGA_RNA-Seq HYDIN-PSMD11 HYDIN chr16 71052032 - PSMD11 chr17 30791067 + Exonic hg19 PRAD TCGA-KK-A8IH 4 8 Out-of-frame Inter-chr q11.2 Seq+ 42604 ChimerSeq STARFusion TCGA_RNA-Seq CIC-CD177 CIC chr19 42772746 + CD177 chr19 43858005 + Exonic hg19 PRAD TCGA-KK-A8IH 3 9 5'UTR-CDS Intra-chr q13.2 Oncogene Tumor suppressor gene Transcription factor q13.31 Seq+ 42605 ChimerSeq STARFusion TCGA_RNA-Seq PSMD11-LINC00670 PSMD11 chr17 30771632 + LINC00670 chr17 12453277 + Exonic hg19 PRAD TCGA-KK-A8IH 3 9 Out-of-frame Intra-chr q11.2 p12 42606 ChimerSeq STARFusion TCGA_RNA-Seq ANK3-USP9Y ANK3 chr10 61815416 - USP9Y chrY 14968265 + Exonic hg19 PRAD TCGA-KK-A8IH 4 3 Out-of-frame Inter-chr q21.2 q11.221 Seq+ 42607 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 PRAD TCGA-EJ-5531 7 3 In-Frame Intra-chr p13.3 p13.3 42608 ChimerSeq STARFusion TCGA_RNA-Seq GPATCH8-NAGS GPATCH8 chr17 42552197 - NAGS chr17 42082069 + Exonic hg19 PRAD TCGA-J4-8198 3 9 In-Frame Intra-chr q21.31 q21.31 Seq+ 42609 ChimerSeq STARFusion TCGA_RNA-Seq ACTR2-SORBS2 ACTR2 chr2 65482828 + SORBS2 chr4 186696520 - Exonic hg19 PRAD TCGA-J4-8198 3 7 CDS-5'UTR Inter-chr p14 TKL:STKR q35.1 Seq+ 42610 ChimerSeq STARFusion TCGA_RNA-Seq SAE1-BAX SAE1 chr19 47646862 + BAX chr19 49464067 + Exonic hg19 PRAD TCGA-EJ-5532 35 135 In-Frame Intra-chr q13.32 q13.33 Tumor suppressor gene Seq+ 42611 ChimerSeq STARFusion TCGA_RNA-Seq RAP1GAP2-OR1E3 RAP1GAP2 chr17 2894691 + OR1E3 chr17 3019704 + Exonic hg19 PRAD TCGA-EJ-5532 20 69 Out-of-frame Intra-chr p13.3 p13.3 42612 ChimerSeq STARFusion TCGA_RNA-Seq BAX-WRAP53 BAX chr19 49459590 + WRAP53 chr17 7589952 + Exonic hg19 PRAD TCGA-EJ-5532 12 95 5'UTR-5'UTR Inter-chr q13.33 Tumor suppressor gene p13.1 Seq+ 42613 ChimerSeq STARFusion TCGA_RNA-Seq BAX-WRAP53 BAX chr19 49459590 + WRAP53 chr17 7590371 + Exonic hg19 PRAD TCGA-EJ-5532 3 95 5'UTR-5'UTR Inter-chr q13.33 Tumor suppressor gene p13.1 Seq+ 42614 ChimerSeq STARFusion TCGA_RNA-Seq FKBP5-VPS54 FKBP5 chr6 35543526 - VPS54 chr2 64124724 - Exonic hg19 PRAD TCGA-EJ-5532 11 50 3'UTR-CDS Inter-chr p21.31 p14 Seq+ 42615 ChimerSeq STARFusion TCGA_RNA-Seq RAP1GDS1-SCD5 RAP1GDS1 chr4 99325753 + SCD5 chr4 83557976 - Exonic hg19 PRAD TCGA-HC-7212 5 7 Out-of-frame Intra-chr q23 q21.22 Seq+ 42616 ChimerSeq STARFusion TCGA_RNA-Seq SCD5-STAP1 SCD5 chr4 83557744 - STAP1 chr4 68472014 + Exonic hg19 PRAD TCGA-HC-7212 2 10 In-Frame Intra-chr q21.22 q13.2 Seq+ 42617 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G1-PTH2R EIF4G1 chr3 184046778 + PTH2R chr2 209688919 + Exonic hg19 PRAD TCGA-KK-A6DY 3 24 CDS-3'UTR Inter-chr q27.1 q34 Seq+ 42618 ChimerSeq STARFusion TCGA_RNA-Seq ZNF587B-ALOX5 ZNF587B chr19 58350517 + ALOX5 chr10 45935878 + Exonic hg19 PRAD TCGA-KK-A6DY 3 7 Out-of-frame Inter-chr q13.43 Transcription factor 42619 ChimerSeq STARFusion TCGA_RNA-Seq NEDD4L-ZC3H7A NEDD4L chr18 55919286 + ZC3H7A chr16 11876244 - Exonic hg19 PRAD TCGA-EJ-8470 28 132 5'UTR-5'UTR Inter-chr q21.31 Tumor suppressor gene p13.13 Seq+ 42620 ChimerSeq STARFusion TCGA_RNA-Seq NEDD4L-BCAR4 NEDD4L chr18 55919286 + BCAR4 chr16 11922248 - Exonic hg19 PRAD TCGA-EJ-8470 13 88 CDS-3'UTR Inter-chr q21.31 Tumor suppressor gene p13.13 Seq+ 42621 ChimerSeq STARFusion TCGA_RNA-Seq NEDD4L-BCAR4 NEDD4L chr18 55919286 + BCAR4 chr16 11914154 - Exonic hg19 PRAD TCGA-EJ-8470 7 82 CDS-3'UTR Inter-chr q21.31 Tumor suppressor gene p13.13 Seq+ 42622 ChimerSeq STARFusion TCGA_RNA-Seq NSD1-IGH@ NSD1 chr5 176722988 + IGH@ chr14 106791494 - Exonic hg19 PRAD TCGA-EJ-8470 16 1 Out-of-frame Inter-chr q35.3 Oncogene 32.33 42623 ChimerSeq STARFusion TCGA_RNA-Seq AMBRA1-TRPC6 AMBRA1 chr11 46615378 - TRPC6 chr11 101375529 - Exonic hg19 PRAD TCGA-EJ-8470 9 18 5'UTR-CDS Intra-chr p11.2 q22.1 Seq+ 42624 ChimerSeq STARFusion TCGA_RNA-Seq NSD1-IGH@ NSD1 chr5 176722986 + IGH@ chr14 106816213 - Exonic hg19 PRAD TCGA-EJ-8470 8 1 Out-of-frame Inter-chr q35.3 Oncogene 32.33 42625 ChimerSeq STARFusion TCGA_RNA-Seq AMACR-NDUFAF2 AMACR chr5 33998746 - NDUFAF2 chr5 60368952 + Exonic hg19 PRAD TCGA-EJ-8474 119 200 In-Frame Intra-chr p13.2 q12.1 Seq+ 42626 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-SARS TMPRSS2 chr21 42860321 - SARS chr1 109766600 + Exonic hg19 PRAD TCGA-EJ-8474 45 240 In-Frame Inter-chr q22.3 p13.3 Seq+ 42627 ChimerSeq STARFusion TCGA_RNA-Seq FAM13C-S100P FAM13C chr10 61112030 - S100P chr4 6698620 + Exonic hg19 PRAD TCGA-EJ-8474 36 173 In-Frame Inter-chr q21.1 p16.1 Seq+ 42628 ChimerSeq STARFusion TCGA_RNA-Seq CDK7-RIN3 CDK7 chr5 68531280 + RIN3 chr14 93107583 + Exonic hg19 PRAD TCGA-VN-A88K 11 45 Out-of-frame Inter-chr CMGC:CDK q32.12 Seq+ 42629 ChimerSeq STARFusion TCGA_RNA-Seq PPAP2A-SREK1IP1 PPAP2A chr5 54830400 - SREK1IP1 chr5 64050189 - Exonic hg19 PRAD TCGA-VN-A88K 2 9 In-Frame Intra-chr q12.3 Seq+ 42630 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A3-ZBTB7B SLC45A3 chr1 205649522 - ZBTB7B chr1 154987131 + Exonic hg19 PRAD TCGA-FC-A5OB 50 254 5'UTR-5'UTR Intra-chr q32.1 q21.3 Transcription factor Seq+ 42631 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A3-ZBTB7B SLC45A3 chr1 205649522 - ZBTB7B chr1 154986491 + Exonic hg19 PRAD TCGA-FC-A5OB 6 254 5'UTR-5'UTR Intra-chr q32.1 q21.3 Transcription factor Seq+ 42632 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB7B-NUCKS1 ZBTB7B chr1 154975419 + NUCKS1 chr1 205698749 - Exonic hg19 PRAD TCGA-FC-A5OB 4 74 5'UTR-CDS Intra-chr q21.3 Transcription factor q32.1 Seq+ 42633 ChimerSeq STARFusion TCGA_RNA-Seq MAST2-COQ6 MAST2 chr1 46474043 + COQ6 chr14 74425674 + Exonic hg19 PRAD TCGA-FC-A5OB 5 7 In-Frame Inter-chr p34.1 AGC:MAST q24.3 Seq+ 42634 ChimerSeq STARFusion TCGA_RNA-Seq GALNT7-CEP44 GALNT7 chr4 174225269 + CEP44 chr4 175252633 + Exonic hg19 PRAD TCGA-VP-AA1N 61 310 In-Frame Intra-chr q34.1 q34.1 Seq+ 42635 ChimerSeq STARFusion TCGA_RNA-Seq KLK2-PVRL2 KLK2 chr19 51376775 + PVRL2 chr19 45368528 + Exonic hg19 PRAD TCGA-G9-7509 28 127 In-Frame Intra-chr q13.33 Seq+ 42636 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-GLUD1P2 TPD52 chr8 81083660 - GLUD1P2 chr10 48980202 + Exonic hg19 PRAD TCGA-EJ-5542 8 9 Out-of-frame Inter-chr q21.13 q11.22 42637 ChimerSeq STARFusion TCGA_RNA-Seq C10orf118-DCLRE1A C10orf118 chr10 115933774 - DCLRE1A chr10 115613606 - Exonic hg19 PRAD TCGA-EJ-5542 4 9 5'UTR-5'UTR Intra-chr q25.3 Tumor suppressor gene 42638 ChimerSeq STARFusion TCGA_RNA-Seq RBMS2-TMCC3 RBMS2 chr12 56915873 + TMCC3 chr12 94976314 - Exonic hg19 PRAD TCGA-EJ-5542 2 9 In-Frame Intra-chr q13.3 q22 42639 ChimerSeq STARFusion TCGA_RNA-Seq UAP1-ANKRD34A UAP1 chr1 162536138 + ANKRD34A chr1 145470266 + Exonic hg19 PRAD TCGA-VP-A87B 6 12 CDS-5'UTR Intra-chr q23.3 q21.1 42640 ChimerSeq STARFusion TCGA_RNA-Seq SGMS1-VSTM4 SGMS1 chr10 52193236 - VSTM4 chr10 50227820 - Exonic hg19 PRAD TCGA-VP-A87B 4 19 5'UTR-CDS Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 42641 ChimerSeq STARFusion TCGA_RNA-Seq UAP1-LIX1L UAP1 chr1 162536138 + LIX1L chr1 145487304 + Exonic hg19 PRAD TCGA-VP-A87B 4 7 In-Frame Intra-chr q23.3 q21.1 Seq+ 42642 ChimerSeq STARFusion TCGA_RNA-Seq SUMO1-MBD5 SUMO1 chr2 203084755 - MBD5 chr2 148811960 + Exonic hg19 PRAD TCGA-VP-A87B 5 2 CDS-5'UTR Intra-chr q33.1 q23.1 Seq+ 42643 ChimerSeq STARFusion TCGA_RNA-Seq NPY-SSR2 NPY chr7 24329204 + SSR2 chr1 155982675 - Exonic hg19 PRAD TCGA-G9-6362 5 1 Out-of-frame Inter-chr p15.3 q22 42644 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-ABHD15 TAOK1 chr17 27829741 + ABHD15 chr17 27890104 - Exonic hg19 PRAD TCGA-G9-6363 2 59 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 42645 ChimerSeq STARFusion TCGA_RNA-Seq NAALADL2-ROBO2 NAALADL2 chr3 175042114 + ROBO2 chr3 77526565 + Exonic hg19 PRAD TCGA-G9-6363 3 15 In-Frame Intra-chr q26.31 p12.3 42646 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-PCBD1 UVRAG chr11 75623083 + PCBD1 chr10 72643805 - Exonic hg19 PRAD TCGA-G9-6361 10 87 Out-of-frame Inter-chr q13.5 Tumor suppressor gene q22.1 Seq+ 42647 ChimerSeq STARFusion TCGA_RNA-Seq SIK2-PIR SIK2 chr11 111583099 + PIR chrX 15477863 - Exonic hg19 PRAD TCGA-G9-6361 9 86 In-Frame Inter-chr q23.1 p22.2 Seq+ 42648 ChimerSeq STARFusion TCGA_RNA-Seq C11orf30-CDH23 C11orf30 chr11 76158052 + CDH23 chr10 73490226 + Exonic hg19 PRAD TCGA-G9-6361 7 14 Out-of-frame Inter-chr q22.1 Seq+ 42649 ChimerSeq STARFusion TCGA_RNA-Seq ACTR1A-ARMC4 ACTR1A chr10 104262357 - ARMC4 chr10 28101554 - Exonic hg19 PRAD TCGA-G9-6361 3 14 In-Frame Intra-chr q24.32 p12.1 Seq+ 42650 ChimerSeq STARFusion TCGA_RNA-Seq USP48-PSMA8 USP48 chr1 22078000 - PSMA8 chr18 23724523 + Exonic hg19 PRAD TCGA-G9-6361 2 15 In-Frame Inter-chr p36.12 q11.2 Seq+ 42651 ChimerSeq STARFusion TCGA_RNA-Seq SLC10A7-FKBP15 SLC10A7 chr4 147363935 - FKBP15 chr9 115932909 - Exonic hg19 PRAD TCGA-G9-6361 3 6 In-Frame Inter-chr q31.22 q32 Seq+ 42652 ChimerSeq STARFusion TCGA_RNA-Seq ACPP-MYC ACPP chr3 132051188 + MYC chr8 128750494 + Exonic hg19 PRAD TCGA-G9-6366 35 148 In-Frame Inter-chr q22.1 q24.21 Oncogene Transcription factor Seq+ 42653 ChimerSeq STARFusion TCGA_RNA-Seq ACPP-MYC ACPP chr3 132051188 + MYC chr8 128750497 + Exonic hg19 PRAD TCGA-G9-6366 20 148 In-Frame Inter-chr q22.1 q24.21 Oncogene Transcription factor Seq+ 42654 ChimerSeq STARFusion TCGA_RNA-Seq SLC35F5-WIPF1 SLC35F5 chr2 114508002 - WIPF1 chr2 175541852 - Exonic hg19 PRAD TCGA-G9-6364 13 119 CDS-5'UTR Intra-chr q14.1 q31.1 Seq+ 42655 ChimerSeq STARFusion TCGA_RNA-Seq WBP1L-PTEN WBP1L chr10 104557852 + PTEN chr10 89692770 + Exonic hg19 PRAD TCGA-G9-6364 11 21 In-Frame Intra-chr q24.32 q23.31 Oncogene Tumor suppressor gene Seq+ 42656 ChimerSeq STARFusion TCGA_RNA-Seq FYTTD1-IFIT1 FYTTD1 chr3 197476945 + IFIT1 chr10 91162038 + Exonic hg19 PRAD TCGA-G9-6364 4 21 Out-of-frame Inter-chr q29 q23.31 Seq+ 42657 ChimerSeq STARFusion TCGA_RNA-Seq GBF1-WBP1L GBF1 chr10 104103939 + WBP1L chr10 104569650 + Exonic hg19 PRAD TCGA-G9-6364 3 9 In-Frame Intra-chr q24.32 q24.32 Seq+ 42658 ChimerSeq STARFusion TCGA_RNA-Seq KLK3-MSMB KLK3 chr19 51361836 + MSMB chr10 51562326 + Exonic hg19 PRAD TCGA-G9-6365 3 8 Out-of-frame Inter-chr q13.33 q11.22 Tumor suppressor gene 42659 ChimerSeq STARFusion TCGA_RNA-Seq LARP4-HPD LARP4 chr12 50824353 + HPD chr12 122285120 - Exonic hg19 PRAD TCGA-YL-A8HO 6 9 In-Frame Intra-chr q13.12 q24.31 Seq+ 42660 ChimerSeq STARFusion TCGA_RNA-Seq CEP170-IFI16 CEP170 chr1 243418342 - IFI16 chr1 158979793 + Exonic hg19 PRAD TCGA-YL-A8HM 6 16 5'UTR-5'UTR Intra-chr q23.1 Tumor suppressor gene Seq+ 42661 ChimerSeq STARFusion TCGA_RNA-Seq ELAVL2-CFTR ELAVL2 chr9 23825804 - CFTR chr7 117304742 + Exonic hg19 PRAD TCGA-YL-A8HM 2 22 5'UTR-CDS Inter-chr p21.3 q31.2 Tumor suppressor gene Seq+ 42662 ChimerSeq STARFusion TCGA_RNA-Seq TMED10-PSMD11 TMED10 chr14 75614367 - PSMD11 chr17 30773963 + Exonic hg19 PRAD TCGA-YL-A8HM 4 3 Out-of-frame Inter-chr q24.3 q11.2 Seq+ 42663 ChimerSeq STARFusion TCGA_RNA-Seq LDLRAD4-NOVA1 LDLRAD4 chr18 13278187 + NOVA1 chr14 26949349 - Exonic hg19 PRAD TCGA-YL-A8HM 2 9 Out-of-frame Inter-chr p11.21 q12 Seq+ 42664 ChimerSeq STARFusion TCGA_RNA-Seq MFGE8-RLBP1 MFGE8 chr15 89448988 - RLBP1 chr15 89754040 - Exonic hg19 PRAD TCGA-YL-A8HM 2 9 Out-of-frame Intra-chr q26.1 q26.1 Seq+ 42665 ChimerSeq STARFusion TCGA_RNA-Seq PHC2-HSP90AA1 PHC2 chr1 33794471 - HSP90AA1 chr14 102568422 - Exonic hg19 PRAD TCGA-YL-A8HM 3 4 Out-of-frame Inter-chr p35.1 q32.31 Oncogene Seq+ 42666 ChimerSeq STARFusion TCGA_RNA-Seq ARFGAP2-FBRSL1 ARFGAP2 chr11 47187819 - FBRSL1 chr12 133144067 + Exonic hg19 PRAD TCGA-YL-A8HL 5 16 In-Frame Inter-chr p11.2 q24.33 Seq+ 42667 ChimerSeq STARFusion TCGA_RNA-Seq NRF1-PPP2R5A NRF1 chr7 129357216 + PPP2R5A chr1 212502477 + Exonic hg19 PRAD TCGA-YL-A8HL 2 5 Out-of-frame Inter-chr q32.2 Tumor suppressor gene Transcription factor q32.3 Seq+ 42668 ChimerSeq STARFusion TCGA_RNA-Seq OR51E2-AMACR OR51E2 chr11 4718883 - AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-CH-5790 2 5 5'UTR-CDS Inter-chr p15.4 p13.2 Seq+ 42669 ChimerSeq STARFusion TCGA_RNA-Seq CXADR-APP CXADR chr21 18885490 + APP chr21 27425664 - Exonic hg19 PRAD TCGA-CH-5792 123 669 In-Frame Intra-chr q21.1 q21.3 Seq+ 42670 ChimerSeq STARFusion TCGA_RNA-Seq TMTC3-LIN7A TMTC3 chr12 88542281 + LIN7A chr12 81205462 - Exonic hg19 PRAD TCGA-CH-5792 5 56 In-Frame Intra-chr q21.32 q21.31 Seq+ 42671 ChimerSeq STARFusion TCGA_RNA-Seq TMTC3-LIN7A TMTC3 chr12 88536264 + LIN7A chr12 81205462 - Exonic hg19 PRAD TCGA-CH-5792 2 56 5'UTR-CDS Intra-chr q21.32 q21.31 Seq+ 42672 ChimerSeq STARFusion TCGA_RNA-Seq CASP8-NRP2 CASP8 chr2 202098835 + NRP2 chr2 206547815 + Exonic hg19 PRAD TCGA-CH-5792 8 15 5'UTR-5'UTR Intra-chr q33.1 Oncogene Tumor suppressor gene q33.3 Seq+ 42673 ChimerSeq STARFusion TCGA_RNA-Seq FAM66C-CACNA1C FAM66C chr12 8333348 + CACNA1C chr12 2224390 + Exonic hg19 PRAD TCGA-CH-5792 3 8 5'UTR-CDS Intra-chr p13.31 p13.33 42674 ChimerSeq STARFusion TCGA_RNA-Seq PUM2-FAM49A PUM2 chr2 20494137 - FAM49A chr2 16769397 - Exonic hg19 PRAD TCGA-CH-5794 6 10 CDS-5'UTR Intra-chr p24.1 p24.2 Seq+ 42675 ChimerSeq STARFusion TCGA_RNA-Seq MED13L-TAOK3 MED13L chr12 116675273 - TAOK3 chr12 118588963 - Exonic hg19 PRAD TCGA-YJ-A8SW 35 170 Out-of-frame Intra-chr q24.21 q24.23 Seq+ 42676 ChimerSeq STARFusion TCGA_RNA-Seq EPS15L1-CPAMD8 EPS15L1 chr19 16582724 - CPAMD8 chr19 17049256 - Exonic hg19 PRAD TCGA-YJ-A8SW 25 33 In-Frame Intra-chr p13.11 p13.11 Seq+ 42677 ChimerSeq STARFusion TCGA_RNA-Seq DYNC1H1-EVL DYNC1H1 chr14 102478807 + EVL chr14 100551024 + Exonic hg19 PRAD TCGA-YJ-A8SW 17 62 Out-of-frame Intra-chr q32.31 q32.2 Seq+ 42678 ChimerSeq STARFusion TCGA_RNA-Seq ANO7-RALBP1 ANO7 chr2 242157796 + RALBP1 chr18 9530832 + Exonic hg19 PRAD TCGA-YJ-A8SW 13 65 Out-of-frame Inter-chr q37.3 p11.22 Seq+ 42679 ChimerSeq STARFusion TCGA_RNA-Seq ZNF587-KIR2DL3 ZNF587 chr19 58370672 + KIR2DL3 chr19 55250953 + Exonic hg19 PRAD TCGA-YJ-A8SW 15 55 Out-of-frame Intra-chr q13.43 Transcription factor 42680 ChimerSeq STARFusion TCGA_RNA-Seq ZNF587-KIR2DL1 ZNF587 chr19 58370672 + KIR2DL1 chr19 55282301 + Exonic hg19 PRAD TCGA-YJ-A8SW 13 56 Out-of-frame Intra-chr q13.43 Transcription factor 42681 ChimerSeq STARFusion TCGA_RNA-Seq PRUNE-RAB7A PRUNE chr1 150981147 + RAB7A chr3 128514203 + Exonic hg19 PRAD TCGA-YJ-A8SW 7 66 CDS-5'UTR Inter-chr q21.3 Tumor suppressor gene Seq+ 42682 ChimerSeq STARFusion TCGA_RNA-Seq ZNF587-KIR2DL1 ZNF587 chr19 58371033 + KIR2DL1 chr19 55282301 + Exonic hg19 PRAD TCGA-YJ-A8SW 3 56 Out-of-frame Intra-chr q13.43 Transcription factor 42683 ChimerSeq STARFusion TCGA_RNA-Seq ZNF587-KIR2DL3 ZNF587 chr19 58370261 + KIR2DL3 chr19 55250953 + Exonic hg19 PRAD TCGA-YJ-A8SW 4 51 Out-of-frame Intra-chr q13.43 Transcription factor 42684 ChimerSeq STARFusion TCGA_RNA-Seq TTC3-C21orf49 TTC3 chr21 38545046 + C21orf49 chr21 34258240 + Exonic hg19 PRAD TCGA-YJ-A8SW 9 30 CDS-3'UTR Intra-chr q22.13 42685 ChimerSeq STARFusion TCGA_RNA-Seq FAM49A-RAD51AP2 FAM49A chr2 16805132 - RAD51AP2 chr2 17692222 - Exonic hg19 PRAD TCGA-YJ-A8SW 5 39 5'UTR-CDS Intra-chr p24.2 p24.2 Seq+ 42686 ChimerSeq STARFusion TCGA_RNA-Seq FAM49A-RAD51AP2 FAM49A chr2 16805132 - RAD51AP2 chr2 17695359 - Exonic hg19 PRAD TCGA-YJ-A8SW 4 39 5'UTR-CDS Intra-chr p24.2 p24.2 Seq+ 42687 ChimerSeq STARFusion TCGA_RNA-Seq ZNF587-KIR2DL3 ZNF587 chr19 58371033 + KIR2DL3 chr19 55250953 + Exonic hg19 PRAD TCGA-YJ-A8SW 3 40 Out-of-frame Intra-chr q13.43 Transcription factor 42688 ChimerSeq STARFusion TCGA_RNA-Seq LUC7L2-MRPS33 LUC7L2 chr7 139060902 + MRPS33 chr7 140710460 - Exonic hg19 PRAD TCGA-YJ-A8SW 7 22 CDS-5'UTR Intra-chr q34 q34 Seq+ 42689 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD1-ST18 PCMTD1 chr8 52758221 - ST18 chr8 53142637 - Exonic hg19 PRAD TCGA-YJ-A8SW 4 30 CDS-5'UTR Intra-chr q11.23 q11.23 Transcription factor Seq+ 42690 ChimerSeq STARFusion TCGA_RNA-Seq NSRP1-CDK12 NSRP1 chr17 28445191 + CDK12 chr17 37646810 + Exonic hg19 PRAD TCGA-YJ-A8SW 4 23 Out-of-frame Intra-chr q11.2 q12 Oncogene Seq+ 42691 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-RNF139 PVT1 chr8 128806980 + RNF139 chr8 125498072 + Exonic hg19 PRAD TCGA-YJ-A8SW 7 11 5'UTR-CDS Intra-chr q24.21 q24.13 Seq+ 42692 ChimerSeq STARFusion TCGA_RNA-Seq CHD1L-LCE1A CHD1L chr1 146747131 + LCE1A chr1 152799927 + Exonic hg19 PRAD TCGA-YJ-A8SW 4 21 5'UTR-5'UTR Intra-chr q21.1 q21.3 Seq+ 42693 ChimerSeq STARFusion TCGA_RNA-Seq TTC3-C21orf49 TTC3 chr21 38545046 + C21orf49 chr21 34265886 + Exonic hg19 PRAD TCGA-YJ-A8SW 2 29 CDS-3'UTR Intra-chr q22.13 42694 ChimerSeq STARFusion TCGA_RNA-Seq FRYL-OCIAD2 FRYL chr4 48782095 - OCIAD2 chr4 48906628 - Exonic hg19 PRAD TCGA-YJ-A8SW 6 12 5'UTR-5'UTR Intra-chr p11 p11 Seq+ 42695 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD1-ST18 PCMTD1 chr8 52758221 - ST18 chr8 53159224 - Exonic hg19 PRAD TCGA-YJ-A8SW 2 28 CDS-5'UTR Intra-chr q11.23 q11.23 Transcription factor Seq+ 42696 ChimerSeq STARFusion TCGA_RNA-Seq SMOX-PANK2 SMOX chr20 4129624 + PANK2 chr20 3888573 + Exonic hg19 PRAD TCGA-YJ-A8SW 8 4 5'UTR-5'UTR Intra-chr p13 p13 Seq+ 42697 ChimerSeq STARFusion TCGA_RNA-Seq NSRP1-CDK12 NSRP1 chr17 28443881 + CDK12 chr17 37646810 + Exonic hg19 PRAD TCGA-YJ-A8SW 3 23 In-Frame Intra-chr q11.2 q12 Oncogene Seq+ 42698 ChimerSeq STARFusion TCGA_RNA-Seq DHX30-LIMD1 DHX30 chr3 47844702 + LIMD1 chr3 45707142 + Exonic hg19 PRAD TCGA-YJ-A8SW 4 13 5'UTR-CDS Intra-chr p21.31 p21.31 Tumor suppressor gene Seq+ 42699 ChimerSeq STARFusion TCGA_RNA-Seq GALK2-FGF7 GALK2 chr15 49612002 + FGF7 chr15 49775348 + Exonic hg19 PRAD TCGA-YJ-A8SW 5 9 Out-of-frame Intra-chr q21.1 q21.2 42700 ChimerSeq STARFusion TCGA_RNA-Seq PAQR3-ANTXR2 PAQR3 chr4 79847675 - ANTXR2 chr4 80906017 - Exonic hg19 PRAD TCGA-YJ-A8SW 5 9 In-Frame Intra-chr q21.21 q21.21 Seq+ 42701 ChimerSeq STARFusion TCGA_RNA-Seq CCSER1-AFF1 CCSER1 chr4 91048982 + AFF1 chr4 87967318 + Exonic hg19 PRAD TCGA-YJ-A8SW 3 15 Out-of-frame Intra-chr q22.1 q21.3 Oncogene Seq+ 42702 ChimerSeq STARFusion TCGA_RNA-Seq ZNF587-KIR2DL3 ZNF587 chr19 58371092 + KIR2DL3 chr19 55250953 + Exonic hg19 PRAD TCGA-YJ-A8SW 3 14 Out-of-frame Intra-chr q13.43 Transcription factor 42703 ChimerSeq STARFusion TCGA_RNA-Seq IFT43-RBM25 IFT43 chr14 76455320 + RBM25 chr14 73543027 + Exonic hg19 PRAD TCGA-YJ-A8SW 4 9 Out-of-frame Intra-chr q24.3 q24.2 Seq+ 42704 ChimerSeq STARFusion TCGA_RNA-Seq H2AFJ-HIST1H2AC H2AFJ chr12 14927507 + HIST1H2AC chr6 26124534 + Exonic hg19 PRAD TCGA-EJ-7218 3 7 Out-of-frame Inter-chr p12.3 p22.2 42705 ChimerSeq STARFusion TCGA_RNA-Seq GALNT7-GAB1 GALNT7 chr4 174090112 + GAB1 chr4 144336630 + Exonic hg19 PRAD TCGA-VN-A943 8 8 In-Frame Intra-chr q34.1 q31.21 Seq+ 42706 ChimerSeq STARFusion TCGA_RNA-Seq PARP8-ELL2 PARP8 chr5 49963959 + ELL2 chr5 95278753 - Exonic hg19 PRAD TCGA-VN-A943 3 11 Out-of-frame Intra-chr q11.1 q15 Seq+ 42707 ChimerSeq STARFusion TCGA_RNA-Seq ATF3-USH2A ATF3 chr1 212791576 + USH2A chr1 216011445 - Exonic hg19 PRAD TCGA-VN-A943 4 5 In-Frame Intra-chr q32.3 Tumor suppressor gene Transcription factor q41 Seq+ 42708 ChimerSeq STARFusion TCGA_RNA-Seq MOB1A-DUSP11 MOB1A chr2 74405788 - DUSP11 chr2 74005503 - Exonic hg19 PRAD TCGA-KK-A6E2 10 64 In-Frame Intra-chr p13.1 Tumor suppressor gene p13.1 Seq+ 42709 ChimerSeq STARFusion TCGA_RNA-Seq TSC22D1-NUFIP1 TSC22D1 chr13 45147299 - NUFIP1 chr13 45540071 - Exonic hg19 PRAD TCGA-KK-A6E2 9 14 In-Frame Intra-chr q14.11 Tumor suppressor gene Transcription factor q14.12 Seq+ 42710 ChimerSeq STARFusion TCGA_RNA-Seq BANK1-GSTCD BANK1 chr4 102965064 + GSTCD chr4 106744111 + Exonic hg19 PRAD TCGA-YL-A8S8 42 204 In-Frame Intra-chr q24 q24 Seq+ 42711 ChimerSeq STARFusion TCGA_RNA-Seq FAM171B-KYNU FAM171B chr2 187559138 + KYNU chr2 143642918 + Exonic hg19 PRAD TCGA-YL-A8S8 6 40 CDS-5'UTR Intra-chr q32.1 q22.2 Seq+ 42712 ChimerSeq STARFusion TCGA_RNA-Seq YTHDC1-TMPRSS11F YTHDC1 chr4 69204001 - TMPRSS11F chr4 68939727 - Exonic hg19 PRAD TCGA-YL-A8S8 5 17 Out-of-frame Intra-chr q13.2 Seq+ 42713 ChimerSeq STARFusion TCGA_RNA-Seq YTHDC1-TMPRSS11F YTHDC1 chr4 69204001 - TMPRSS11F chr4 68938204 - Exonic hg19 PRAD TCGA-YL-A8S8 2 16 Out-of-frame Intra-chr q13.2 Seq+ 42714 ChimerSeq STARFusion TCGA_RNA-Seq DLG2-CARD17 DLG2 chr11 83252725 - CARD17 chr11 104970148 - Exonic hg19 PRAD TCGA-YL-A8S8 3 7 Out-of-frame Intra-chr q14.1 q22.3 Seq+ 42715 ChimerSeq STARFusion TCGA_RNA-Seq NAALADL2-NLGN1 NAALADL2 chr3 174577240 + NLGN1 chr3 173993105 + Exonic hg19 PRAD TCGA-YL-A8S8 3 5 In-Frame Intra-chr q26.31 q26.31 Seq+ 42716 ChimerSeq STARFusion TCGA_RNA-Seq TERF2IP-AMY1A TERF2IP chr16 75682450 + AMY1A chr1 104206953 + Exonic hg19 PRAD TCGA-YL-A8S9 316 765 CDS-5'UTR Inter-chr q23.1 p21.1 Seq+ 42717 ChimerSeq STARFusion TCGA_RNA-Seq TERF2IP-AMY1A TERF2IP chr16 75682450 + AMY1A chr1 104121933 + Exonic hg19 PRAD TCGA-YL-A8S9 140 765 CDS-5'UTR Inter-chr q23.1 p21.1 Seq+ 42718 ChimerSeq STARFusion TCGA_RNA-Seq GPR89A-HOOK3 GPR89A chr1 145811342 - HOOK3 chr8 42780700 + Exonic hg19 PRAD TCGA-YL-A8S9 10 32 Out-of-frame Inter-chr q21.1 p11.21 Oncogene 42719 ChimerSeq STARFusion TCGA_RNA-Seq ACPP-AMACR ACPP chr3 132075699 + AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-YL-A8S9 4 16 In-Frame Inter-chr q22.1 p13.2 42720 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-BRAF TMPRSS2 chr21 42866283 - BRAF chr7 140481493 - Exonic hg19 PRAD TCGA-FC-A6HD 29 189 Out-of-frame Inter-chr q22.3 q34 TKL:RAF Oncogene Seq+ 42721 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-BRAF TMPRSS2 chr21 42870046 - BRAF chr7 140481493 - Exonic hg19 PRAD TCGA-FC-A6HD 6 145 In-Frame Inter-chr q22.3 q34 TKL:RAF Oncogene Seq+ 42722 ChimerSeq STARFusion TCGA_RNA-Seq LETM1-C7orf55 LETM1 chr4 1834471 - C7orf55 chr7 139030247 + Exonic hg19 PRAD TCGA-FC-A6HD 5 73 In-Frame Inter-chr p16.3 42723 ChimerSeq STARFusion TCGA_RNA-Seq LETM1-C7orf55 LETM1 chr4 1834307 - C7orf55 chr7 139030246 + Exonic hg19 PRAD TCGA-FC-A6HD 4 70 Out-of-frame Inter-chr p16.3 42724 ChimerSeq STARFusion TCGA_RNA-Seq LETM1-LUC7L2 LETM1 chr4 1834471 - LUC7L2 chr7 139030247 + Exonic hg19 PRAD TCGA-FC-A6HD 5 62 In-Frame Inter-chr p16.3 q34 42725 ChimerSeq STARFusion TCGA_RNA-Seq HEATR2-PLCXD2 HEATR2 chr7 769484 + PLCXD2 chr3 111497115 + Exonic hg19 PRAD TCGA-FC-A6HD 8 47 CDS-3'UTR Inter-chr q13.2 42726 ChimerSeq STARFusion TCGA_RNA-Seq LETM1-LUC7L2 LETM1 chr4 1834307 - LUC7L2 chr7 139030246 + Exonic hg19 PRAD TCGA-FC-A6HD 4 59 Out-of-frame Inter-chr p16.3 q34 42727 ChimerSeq STARFusion TCGA_RNA-Seq HEATR2-PLCXD2 HEATR2 chr7 769484 + PLCXD2 chr3 111564668 + Exonic hg19 PRAD TCGA-FC-A6HD 2 47 Out-of-frame Inter-chr q13.2 42728 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-IRS2 TMPRSS2 chr21 42860321 - IRS2 chr13 110408655 - Exonic hg19 PRAD TCGA-HI-7171 141 1103 In-Frame Inter-chr q22.3 q34 Oncogene Seq+ 42729 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-IRS2 TMPRSS2 chr21 42861434 - IRS2 chr13 110408655 - Exonic hg19 PRAD TCGA-HI-7171 20 1100 In-Frame Inter-chr q22.3 q34 Oncogene Seq+ 42730 ChimerSeq STARFusion TCGA_RNA-Seq CUX2-ANAPC11 CUX2 chr12 111472044 + ANAPC11 chr17 79852343 + Exonic hg19 PRAD TCGA-HI-7171 6 45 CDS-5'UTR Inter-chr q24.11 Transcription factor q25.3 Seq+ 42731 ChimerSeq STARFusion TCGA_RNA-Seq PART1-NDUFAF2 PART1 chr5 59784250 + NDUFAF2 chr5 60368952 + Exonic hg19 PRAD TCGA-HI-7171 10 28 5'UTR-CDS Intra-chr q12.1 q12.1 Seq+ 42732 ChimerSeq STARFusion TCGA_RNA-Seq CUX2-ANAPC11 CUX2 chr12 111472044 + ANAPC11 chr17 79851428 + Exonic hg19 PRAD TCGA-HI-7171 2 45 CDS-5'UTR Inter-chr q24.11 Transcription factor q25.3 Seq+ 42733 ChimerSeq STARFusion TCGA_RNA-Seq DNAH2-WRAP53 DNAH2 chr17 7727285 + WRAP53 chr17 7590695 + Exonic hg19 PRAD TCGA-HI-7171 3 41 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 42734 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G2-RSPO2 EIF4G2 chr11 10828802 - RSPO2 chr8 109095035 - Exonic hg19 PRAD TCGA-HI-7171 5 17 CDS-5'UTR Inter-chr p15.4 q23.1 Seq+ 42735 ChimerSeq STARFusion TCGA_RNA-Seq GPS2-RBFOX3 GPS2 chr17 7217807 - RBFOX3 chr17 77303906 - Exonic hg19 PRAD TCGA-HI-7171 4 17 CDS-5'UTR Intra-chr p13.1 q25.3 Seq+ 42736 ChimerSeq STARFusion TCGA_RNA-Seq METTL21A-INO80B METTL21A chr2 208486530 - INO80B chr2 74682945 + Exonic hg19 PRAD TCGA-G9-6342 5 18 Out-of-frame Intra-chr q33.3 p13.1 42737 ChimerSeq STARFusion TCGA_RNA-Seq REPS2-TXLNG REPS2 chrX 16965257 + TXLNG chrX 16836697 + Exonic hg19 PRAD TCGA-VP-A87H 2 7 In-Frame Intra-chr p22.2 p22.2 Seq+ 42738 ChimerSeq STARFusion TCGA_RNA-Seq ZZZ3-CXCL11 ZZZ3 chr1 78148947 - CXCL11 chr4 76957217 - Exonic hg19 PRAD TCGA-VP-A87K 16 38 Out-of-frame Inter-chr p31.1 Transcription factor q21.1 Seq+ 42739 ChimerSeq STARFusion TCGA_RNA-Seq UBQLN4-AHCYL1 UBQLN4 chr1 156011276 - AHCYL1 chr1 110551656 + Exonic hg19 PRAD TCGA-VP-A87K 11 22 In-Frame Intra-chr q22 p13.3 Tumor suppressor gene Seq+ 42740 ChimerSeq STARFusion TCGA_RNA-Seq WBP1L-ADTRP WBP1L chr10 104557852 + ADTRP chr6 11768616 - Exonic hg19 PRAD TCGA-VP-A87K 6 26 Out-of-frame Inter-chr q24.32 p24.1 Seq+ 42741 ChimerSeq STARFusion TCGA_RNA-Seq FOXP1-UGGT1 FOXP1 chr3 71037145 - UGGT1 chr2 128941249 + Exonic hg19 PRAD TCGA-VP-A87K 4 14 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor q14.3 Seq+ 42742 ChimerSeq STARFusion TCGA_RNA-Seq PPP3CA-SEPT11 PPP3CA chr4 102267896 - SEPT11 chr4 77917578 + Exonic hg19 PRAD TCGA-VP-A87K 4 13 Out-of-frame Intra-chr q24 q21.1 Seq+ 42743 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF38-COL25A1 ARHGEF38 chr4 106534664 + COL25A1 chr4 109767375 - Exonic hg19 PRAD TCGA-VP-A87K 4 12 Out-of-frame Intra-chr q24 q25 Seq+ 42744 ChimerSeq STARFusion TCGA_RNA-Seq ACTR1A-OBFC1 ACTR1A chr10 104262357 - OBFC1 chr10 105642599 - Exonic hg19 PRAD TCGA-VP-A87K 4 10 Out-of-frame Intra-chr q24.32 Seq+ 42745 ChimerSeq STARFusion TCGA_RNA-Seq SEC16B-EGF SEC16B chr1 177927269 - EGF chr4 110914401 + Exonic hg19 PRAD TCGA-VP-A87K 3 5 Out-of-frame Inter-chr q25.2 q25 Seq+ 42746 ChimerSeq STARFusion TCGA_RNA-Seq RBM19-CLK2 RBM19 chr12 114364859 - CLK2 chr1 155240768 - Exonic hg19 PRAD TCGA-VP-A87K 2 7 CDS-5'UTR Inter-chr q24.21 q22 CMGC:CLK Seq+ 42747 ChimerSeq STARFusion TCGA_RNA-Seq CUX2-CABP1 CUX2 chr12 111701643 + CABP1 chr12 121097681 + Exonic hg19 PRAD TCGA-VP-A872 5 50 Out-of-frame Intra-chr q24.11 Transcription factor q24.31 Seq+ 42748 ChimerSeq STARFusion TCGA_RNA-Seq NFKBIA-TTC6 NFKBIA chr14 35872449 - TTC6 chr14 38259922 + Exonic hg19 PRAD TCGA-VP-A872 4 37 Out-of-frame Intra-chr q13.2 q21.1 Seq+ 42749 ChimerSeq STARFusion TCGA_RNA-Seq TROVE2-CACNA1S TROVE2 chr1 193028906 + CACNA1S chr1 201039532 - Exonic hg19 PRAD TCGA-VP-A875 10 60 5'UTR-CDS Intra-chr q31.2 q32.1 Seq+ 42750 ChimerSeq STARFusion TCGA_RNA-Seq GSKIP-CLDN6 GSKIP chr14 96846125 + CLDN6 chr16 3065182 - Exonic hg19 PRAD TCGA-VP-A875 6 20 Out-of-frame Inter-chr q32.2 p13.3 Seq+ 42751 ChimerSeq STARFusion TCGA_RNA-Seq SLC4A4-GOLGA4 SLC4A4 chr4 72413437 + GOLGA4 chr3 37396592 + Exonic hg19 PRAD TCGA-VP-A875 4 13 In-Frame Inter-chr q13.3 p22.2 Seq+ 42752 ChimerSeq STARFusion TCGA_RNA-Seq KAT6B-SH3BP5L KAT6B chr10 76603236 + SH3BP5L chr1 249119565 - Exonic hg19 PRAD TCGA-VP-A875 4 12 CDS-5'UTR Inter-chr Oncogene q44 Seq+ 42753 ChimerSeq STARFusion TCGA_RNA-Seq AMD1-EPG5 AMD1 chr6 111196418 + EPG5 chr18 43479531 - Exonic hg19 PRAD TCGA-VP-A875 2 19 In-Frame Inter-chr q21 q21.1 Seq+ 42754 ChimerSeq STARFusion TCGA_RNA-Seq KAT6B-SH3BP5L KAT6B chr10 76603236 + SH3BP5L chr1 249120720 - Exonic hg19 PRAD TCGA-VP-A875 3 12 CDS-5'UTR Inter-chr Oncogene q44 Seq+ 42755 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K5-CLVS2 MAP3K5 chr6 136972122 - CLVS2 chr6 123369767 + Exonic hg19 PRAD TCGA-VP-A875 3 9 In-Frame Intra-chr q23.3 STE:STE11 q22.31 Seq+ 42756 ChimerSeq STARFusion TCGA_RNA-Seq AP1B1-CLTCL1 AP1B1 chr22 29784413 - CLTCL1 chr22 19222229 - Exonic hg19 PRAD TCGA-VP-A875 2 12 5'UTR-CDS Intra-chr q12.2 q11.21 Seq+ 42757 ChimerSeq STARFusion TCGA_RNA-Seq AP1B1-CLTCL1 AP1B1 chr22 29784413 - CLTCL1 chr22 19223392 - Exonic hg19 PRAD TCGA-VP-A875 2 12 5'UTR-CDS Intra-chr q12.2 q11.21 Seq+ 42758 ChimerSeq STARFusion TCGA_RNA-Seq EZR-SNX9 EZR chr6 159239114 - SNX9 chr6 158317859 + Exonic hg19 PRAD TCGA-VP-A875 2 9 In-Frame Intra-chr q25.3 q25.3 Seq+ 42759 ChimerSeq STARFusion TCGA_RNA-Seq AP3D1-KCTD19 AP3D1 chr19 2138618 - KCTD19 chr16 67354788 - Exonic hg19 PRAD TCGA-VP-A875 2 7 In-Frame Inter-chr p13.3 q22.1 Seq+ 42760 ChimerSeq STARFusion TCGA_RNA-Seq GPR160-PDCD10 GPR160 chr3 169756831 + PDCD10 chr3 167405104 - Exonic hg19 PRAD TCGA-VP-A876 5 11 5'UTR-CDS Intra-chr q26.2 q26.1 Seq+ 42761 ChimerSeq STARFusion TCGA_RNA-Seq DDT-TPST2 DDT chr22 24315957 - TPST2 chr22 26940641 - Exonic hg19 PRAD TCGA-VP-A876 4 12 CDS-5'UTR Intra-chr q12.1 Seq+ 42762 ChimerSeq STARFusion TCGA_RNA-Seq DDTL-TPST2 DDTL chr22 24373785 + TPST2 chr22 26940641 - Exonic hg19 PRAD TCGA-VP-A876 3 12 3'UTR-5'UTR Intra-chr q12.1 42763 ChimerSeq STARFusion TCGA_RNA-Seq ABCC4-CCDC169 ABCC4 chr13 95838955 - CCDC169 chr13 36801518 - Exonic hg19 PRAD TCGA-VP-A876 2 5 Out-of-frame Intra-chr q32.1 q13.3 Seq+ 42764 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L2-TRIM11 SIPA1L2 chr1 232626620 - TRIM11 chr1 228589862 - Exonic hg19 PRAD TCGA-VP-A876 2 3 In-Frame Intra-chr q42.2 q42.13 Seq+ 42765 ChimerSeq STARFusion TCGA_RNA-Seq ZNF326-NEGR1 ZNF326 chr1 90470651 + NEGR1 chr1 72163822 - Exonic hg19 PRAD TCGA-VP-A876 2 3 Out-of-frame Intra-chr p22.2 Transcription factor p31.1 Seq+ 42766 ChimerSeq STARFusion TCGA_RNA-Seq POLR3C-NOTCH2NL POLR3C chr1 145610744 - NOTCH2NL chr1 145281369 + Exonic hg19 PRAD TCGA-VP-A879 6 16 5'UTR-CDS Intra-chr q21.1 q21.1 42767 ChimerSeq STARFusion TCGA_RNA-Seq CDH1-TRHDE CDH1 chr16 68835796 + TRHDE chr12 72771775 + Exonic hg19 PRAD TCGA-VP-A879 5 12 In-Frame Inter-chr q22.1 Oncogene Tumor suppressor gene q21.1 Seq+ 42768 ChimerSeq STARFusion TCGA_RNA-Seq SENP6-OOEP SENP6 chr6 76344527 + OOEP chr6 74079108 - Exonic hg19 PRAD TCGA-HC-7210 12 134 Out-of-frame Intra-chr q14.1 q13 Seq+ 42769 ChimerSeq STARFusion TCGA_RNA-Seq TUSC3-LOXL2 TUSC3 chr8 15601121 + LOXL2 chr8 23225947 - Exonic hg19 PRAD TCGA-HC-7210 8 24 CDS-5'UTR Intra-chr p22 p21.3 Seq+ 42770 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A3-EPB41L4B SLC45A3 chr1 205628617 - EPB41L4B chr9 112042201 - Exonic hg19 PRAD TCGA-HC-7211 28 188 Out-of-frame Inter-chr q32.1 q31.3 Seq+ 42771 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A3-EPB41L4B SLC45A3 chr1 205630989 - EPB41L4B chr9 112042201 - Exonic hg19 PRAD TCGA-HC-7211 21 188 In-Frame Inter-chr q32.1 q31.3 Seq+ 42772 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A3-EPB41L4B SLC45A3 chr1 205628404 - EPB41L4B chr9 112042201 - Exonic hg19 PRAD TCGA-HC-7211 3 188 Out-of-frame Inter-chr q32.1 q31.3 Seq+ 42773 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-CLDN11 ZBTB20 chr3 114099064 - CLDN11 chr3 170140951 + Exonic hg19 PRAD TCGA-HC-7211 2 8 In-Frame Intra-chr q13.31 Transcription factor q26.2 Seq+ 42774 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-CLDN11 ZBTB20 chr3 114069121 - CLDN11 chr3 170140951 + Exonic hg19 PRAD TCGA-HC-7211 2 8 In-Frame Intra-chr q13.31 Transcription factor q26.2 Seq+ 42775 ChimerSeq STARFusion TCGA_RNA-Seq DCUN1D1-SLC22A1 DCUN1D1 chr3 182698275 - SLC22A1 chr6 160575830 + Exonic hg19 PRAD TCGA-HC-A76X 12 12 Out-of-frame Inter-chr q26.33 Oncogene q25.3 Seq+ 42776 ChimerSeq STARFusion TCGA_RNA-Seq DCUN1D1-SLC22A1 DCUN1D1 chr3 182698275 - SLC22A1 chr6 160579548 + Exonic hg19 PRAD TCGA-HC-A76X 6 12 In-Frame Inter-chr q26.33 Oncogene q25.3 Seq+ 42777 ChimerSeq STARFusion TCGA_RNA-Seq CDC27-MYL4 CDC27 chr17 45266512 - MYL4 chr17 45286755 + Exonic hg19 PRAD TCGA-HC-7213 27 236 CDS-5'UTR Intra-chr q21.32 q21.32 Seq+ 42778 ChimerSeq STARFusion TCGA_RNA-Seq ELAC2-COX10 ELAC2 chr17 12919085 - COX10 chr17 14063194 + Exonic hg19 PRAD TCGA-HC-7213 19 71 In-Frame Intra-chr p12 p12 Seq+ 42779 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A3-PHYKPL SLC45A3 chr1 205615850 - PHYKPL chr5 177638971 - Exonic hg19 PRAD TCGA-HC-7213 7 86 Out-of-frame Inter-chr q32.1 q35.3 Seq+ 42780 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A3-PHYKPL SLC45A3 chr1 205628617 - PHYKPL chr5 177638971 - Exonic hg19 PRAD TCGA-HC-7213 3 85 Out-of-frame Inter-chr q32.1 q35.3 Seq+ 42781 ChimerSeq STARFusion TCGA_RNA-Seq MAF1-TMEM205 MAF1 chr8 145161367 + TMEM205 chr19 11456304 - Exonic hg19 PRAD TCGA-YL-A8SB 10 33 CDS-5'UTR Inter-chr q24.3 p13.2 Seq+ 42782 ChimerSeq STARFusion TCGA_RNA-Seq MAF1-TMEM205 MAF1 chr8 145161367 + TMEM205 chr19 11456413 - Exonic hg19 PRAD TCGA-YL-A8SB 2 33 CDS-5'UTR Inter-chr q24.3 p13.2 Seq+ 42783 ChimerSeq STARFusion TCGA_RNA-Seq MINK1-SIGLEC17P MINK1 chr17 4736935 + SIGLEC17P chr19 51670632 + Exonic hg19 PRAD TCGA-YL-A8SB 4 24 CDS-5'UTR Inter-chr p13.2 q13.41 Seq+ 42784 ChimerSeq STARFusion TCGA_RNA-Seq MINK1-SIGLEC17P MINK1 chr17 4736935 + SIGLEC17P chr19 51670761 + Exonic hg19 PRAD TCGA-YL-A8SB 3 24 CDS-5'UTR Inter-chr p13.2 q13.41 Seq+ 42785 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42880008 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-YL-A8SC 372 581 5'UTR-CDS Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 42786 ChimerSeq STARFusion TCGA_RNA-Seq NBR1-C17orf104 NBR1 chr17 41345655 + C17orf104 chr17 42751344 + Exonic hg19 PRAD TCGA-YL-A8SC 28 250 Out-of-frame Intra-chr q21.31 Seq+ 42787 ChimerSeq STARFusion TCGA_RNA-Seq CCDC144NL-AMACR CCDC144NL chr17 20796705 - AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-YL-A8SC 3 30 In-Frame Inter-chr p11.2 p13.2 42788 ChimerSeq STARFusion TCGA_RNA-Seq CCDC144NL-AMACR CCDC144NL chr17 20768732 - AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-YL-A8SC 2 28 In-Frame Inter-chr p11.2 p13.2 42789 ChimerSeq STARFusion TCGA_RNA-Seq APOBEC3AP1-AMACR APOBEC3AP1 chr4 171021257 + AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-YL-A8SC 5 15 Out-of-frame Inter-chr q33 p13.2 42790 ChimerSeq STARFusion TCGA_RNA-Seq SCP2-TMPRSS2 SCP2 chr1 53504718 + TMPRSS2 chr21 42861520 - Exonic hg19 PRAD TCGA-YL-A8SC 2 23 In-Frame Inter-chr p32.3 q22.3 Seq+ 42791 ChimerSeq STARFusion TCGA_RNA-Seq PHF12-KIAA0100 PHF12 chr17 27277083 - KIAA0100 chr17 26971205 - Exonic hg19 PRAD TCGA-YL-A8SC 3 10 In-Frame Intra-chr q11.2 q11.2 Seq+ 42792 ChimerSeq STARFusion TCGA_RNA-Seq AREL1-CELA3B AREL1 chr14 75139534 - CELA3B chr1 22304862 + Exonic hg19 PRAD TCGA-YL-A8SC 2 10 Out-of-frame Inter-chr q24.3 p36.12 42793 ChimerSeq STARFusion TCGA_RNA-Seq NEDD4L-AMACR NEDD4L chr18 55919286 + AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-YL-A8SC 2 10 Out-of-frame Inter-chr q21.31 Tumor suppressor gene p13.2 42794 ChimerSeq STARFusion TCGA_RNA-Seq NAALADL2-AMACR NAALADL2 chr3 175042114 + AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-YL-A8SC 2 9 In-Frame Inter-chr q26.31 p13.2 42795 ChimerSeq STARFusion TCGA_RNA-Seq PTEN-GRID1 PTEN chr10 89690846 + GRID1 chr10 87489371 - Exonic hg19 PRAD TCGA-YL-A8SA 12 33 Out-of-frame Intra-chr q23.31 Oncogene Tumor suppressor gene q23.2 Seq+ 42796 ChimerSeq STARFusion TCGA_RNA-Seq BTBD9-LASP1 BTBD9 chr6 38607576 - LASP1 chr17 37034339 + Exonic hg19 PRAD TCGA-YL-A8SA 4 15 5'UTR-CDS Inter-chr p21.2 q12 Seq+ 42797 ChimerSeq STARFusion TCGA_RNA-Seq FUBP1-DNAJB4 FUBP1 chr1 78444569 - DNAJB4 chr1 78478735 + Exonic hg19 PRAD TCGA-YL-A8SF 15 5 Out-of-frame Intra-chr p31.1 Oncogene p31.1 Tumor suppressor gene Seq+ 42798 ChimerSeq STARFusion TCGA_RNA-Seq HMGN2P46-PRKCI HMGN2P46 chr15 45806161 + PRKCI chr3 170009642 + Exonic hg19 PRAD TCGA-YL-A8SJ 42 289 5'UTR-CDS Inter-chr q21.1 q26.2 Seq+ 42799 ChimerSeq STARFusion TCGA_RNA-Seq HMGN2P46-PRKCI HMGN2P46 chr15 45806161 + PRKCI chr3 170011171 + Exonic hg19 PRAD TCGA-YL-A8SJ 38 261 5'UTR-CDS Inter-chr q21.1 q26.2 Seq+ 42800 ChimerSeq STARFusion TCGA_RNA-Seq TP53INP1-CCDC144CP TP53INP1 chr8 95942768 - CCDC144CP chr17 20294788 + Exonic hg19 PRAD TCGA-YL-A8SJ 13 40 Out-of-frame Inter-chr q22.1 Tumor suppressor gene p11.2 42801 ChimerSeq STARFusion TCGA_RNA-Seq TP53INP1-CCDC144CP TP53INP1 chr8 95942724 - CCDC144CP chr17 20294788 + Exonic hg19 PRAD TCGA-YL-A8SJ 4 40 Out-of-frame Inter-chr q22.1 Tumor suppressor gene p11.2 42802 ChimerSeq STARFusion TCGA_RNA-Seq ARPC1A-VAMP4 ARPC1A chr7 98923627 + VAMP4 chr1 171707603 - Exonic hg19 PRAD TCGA-YL-A8SJ 3 9 5'UTR-5'UTR Inter-chr q22.1 q24.3 Seq+ 42803 ChimerSeq STARFusion TCGA_RNA-Seq WDFY3-KLHL2 WDFY3 chr4 85664853 - KLHL2 chr4 166184349 + Exonic hg19 PRAD TCGA-YL-A8SJ 2 5 Out-of-frame Intra-chr q21.23 q32.3 42804 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 PRAD TCGA-YL-A8SK 5 6 In-Frame Intra-chr p13.3 p13.3 42805 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP32-PRDM10 ARHGAP32 chr11 128963516 - PRDM10 chr11 129782120 - Exonic hg19 PRAD TCGA-YL-A8SK 5 4 In-Frame Intra-chr q24.3 q24.3 Transcription factor Seq+ 42806 ChimerSeq STARFusion TCGA_RNA-Seq PRRC1-SPINK6 PRRC1 chr5 126853468 + SPINK6 chr5 147594468 + Exonic hg19 PRAD TCGA-YL-A8SH 8 21 5'UTR-CDS Intra-chr q23.2 q32 Seq+ 42807 ChimerSeq STARFusion TCGA_RNA-Seq EIF3E-PHF20L1 EIF3E chr8 109240496 - PHF20L1 chr8 133806656 + Exonic hg19 PRAD TCGA-YL-A8SH 2 6 In-Frame Intra-chr q23.1 q24.22 Seq+ 42808 ChimerSeq STARFusion TCGA_RNA-Seq ELP3-FZD3 ELP3 chr8 27950750 + FZD3 chr8 28378155 + Exonic hg19 PRAD TCGA-YL-A8SO 8 11 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 42809 ChimerSeq STARFusion TCGA_RNA-Seq RFX7-DYX1C1 RFX7 chr15 56535323 - DYX1C1 chr15 55742565 - Exonic hg19 PRAD TCGA-YL-A8SO 3 7 Out-of-frame Intra-chr q21.3 Transcription factor Seq+ 42810 ChimerSeq STARFusion TCGA_RNA-Seq CEP350-LEPROT CEP350 chr1 180047809 + LEPROT chr1 65897486 + Exonic hg19 PRAD TCGA-YL-A8SL 4 13 In-Frame Intra-chr q25.2 p31.3 Seq+ 42811 ChimerSeq STARFusion TCGA_RNA-Seq CR1L-C1orf116 CR1L chr1 207881608 + C1orf116 chr1 207198409 - Exonic hg19 PRAD TCGA-YL-A8SL 2 14 Out-of-frame Intra-chr q32.2 q32.1 Seq+ 42812 ChimerSeq STARFusion TCGA_RNA-Seq RBM47-IDO2 RBM47 chr4 40516533 - IDO2 chr8 39806668 + Exonic hg19 PRAD TCGA-YL-A8SR 8 57 5'UTR-CDS Inter-chr p14 p11.21 Seq+ 42813 ChimerSeq STARFusion TCGA_RNA-Seq RBM47-IDO2 RBM47 chr4 40546439 - IDO2 chr8 39821127 + Exonic hg19 PRAD TCGA-YL-A8SR 6 55 5'UTR-CDS Inter-chr p14 p11.21 Seq+ 42814 ChimerSeq STARFusion TCGA_RNA-Seq RBM47-IDO2 RBM47 chr4 40516533 - IDO2 chr8 39821127 + Exonic hg19 PRAD TCGA-YL-A8SR 4 55 5'UTR-CDS Inter-chr p14 p11.21 Seq+ 42815 ChimerSeq STARFusion TCGA_RNA-Seq RBM47-IDO2 RBM47 chr4 40516533 - IDO2 chr8 39806508 + Exonic hg19 PRAD TCGA-YL-A8SR 3 55 Out-of-frame Inter-chr p14 p11.21 Seq+ 42816 ChimerSeq STARFusion TCGA_RNA-Seq RBM47-IDO2 RBM47 chr4 40546439 - IDO2 chr8 39806668 + Exonic hg19 PRAD TCGA-YL-A8SR 2 55 5'UTR-CDS Inter-chr p14 p11.21 Seq+ 42817 ChimerSeq STARFusion TCGA_RNA-Seq ZNF292-EYS ZNF292 chr6 87865477 + EYS chr6 66205886 - Exonic hg19 PRAD TCGA-YL-A8SR 6 24 CDS-5'UTR Intra-chr q14.3 Tumor suppressor gene Transcription factor q12 Seq+ 42818 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2B-LELP1 GATAD2B chr1 153895209 - LELP1 chr1 153177163 + Exonic hg19 PRAD TCGA-YL-A8SR 5 13 5'UTR-5'UTR Intra-chr Transcription factor q21.3 Seq+ 42819 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42866283 - ETV1 chr7 13971374 - Exonic hg19 PRAD TCGA-HC-7818 147 959 Out-of-frame Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 42820 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42880008 - ETV1 chr7 13971374 - Exonic hg19 PRAD TCGA-HC-7818 33 947 5'UTR-CDS Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 42821 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42870046 - ETV1 chr7 13971374 - Exonic hg19 PRAD TCGA-HC-7818 28 947 Out-of-frame Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 42822 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42866407 - ETV1 chr7 13971374 - Exonic hg19 PRAD TCGA-HC-7818 26 947 Out-of-frame Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 42823 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42866283 - ETV1 chr7 13950932 - Exonic hg19 PRAD TCGA-HC-7818 19 947 In-Frame Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 42824 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-DOCK5 AGO2 chr8 141542120 - DOCK5 chr8 25273041 + Exonic hg19 PRAD TCGA-HC-7818 7 46 Out-of-frame Intra-chr q24.3 p21.2 Seq+ 42825 ChimerSeq STARFusion TCGA_RNA-Seq ZNF329-EPN1 ZNF329 chr19 58653924 - EPN1 chr19 56189893 + Exonic hg19 PRAD TCGA-HC-7818 3 54 5'UTR-5'UTR Intra-chr q13.43 Transcription factor q13.42 Seq+ 42826 ChimerSeq STARFusion TCGA_RNA-Seq ZMYND11-LYZL1 ZMYND11 chr10 181499 + LYZL1 chr10 29599039 + Exonic hg19 PRAD TCGA-HC-7818 10 14 5'UTR-CDS Intra-chr p15.3 Tumor suppressor gene p12.1 Seq+ 42827 ChimerSeq STARFusion TCGA_RNA-Seq KLK3-HSP90AB1 KLK3 chr19 51363383 + HSP90AB1 chr6 44220943 + Exonic hg19 PRAD TCGA-HC-7819 3 8 Out-of-frame Inter-chr q13.33 p21.1 Oncogene 42828 ChimerSeq STARFusion TCGA_RNA-Seq RAB4A-WDR47 RAB4A chr1 229424590 + WDR47 chr1 109533951 - Exonic hg19 PRAD TCGA-HC-7817 8 27 In-Frame Intra-chr q42.13 p13.3 Seq+ 42829 ChimerSeq STARFusion TCGA_RNA-Seq MAP4K3-TMEM178A MAP4K3 chr2 39664033 - TMEM178A chr2 39892227 + Exonic hg19 PRAD TCGA-HC-7817 3 20 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 42830 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649522 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-HC-A6AN 37 216 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 42831 ChimerSeq STARFusion TCGA_RNA-Seq LARP4B-FAM21C LARP4B chr10 909683 - FAM21C chr10 46280013 + Exonic hg19 PRAD TCGA-HC-A6AN 2 11 Out-of-frame Intra-chr p15.3 42832 ChimerSeq STARFusion TCGA_RNA-Seq BANK1-AGMO BANK1 chr4 102965064 + AGMO chr7 15240984 - Exonic hg19 PRAD TCGA-HC-A6AL 8 40 Out-of-frame Inter-chr q24 p21.2 Seq+ 42833 ChimerSeq STARFusion TCGA_RNA-Seq GOLGA4-ACAA1 GOLGA4 chr3 37315092 + ACAA1 chr3 38145284 - Exonic hg19 PRAD TCGA-2A-A8VL 7 88 CDS-3'UTR Intra-chr p22.2 p22.2 Seq+ 42834 ChimerSeq STARFusion TCGA_RNA-Seq PUM2-MTFR1L PUM2 chr2 20550358 - MTFR1L chr1 26158412 + Exonic hg19 PRAD TCGA-2A-A8VL 11 44 Out-of-frame Inter-chr p24.1 p36.11 Seq+ 42835 ChimerSeq STARFusion TCGA_RNA-Seq DENND5A-SCUBE2 DENND5A chr11 9171628 - SCUBE2 chr11 9043502 - Exonic hg19 PRAD TCGA-2A-A8VL 3 4 Out-of-frame Intra-chr p15.4 p15.4 Tumor suppressor gene Seq+ 42836 ChimerSeq STARFusion TCGA_RNA-Seq ZNF69-WDR16 ZNF69 chr19 11998801 + WDR16 chr17 9531989 + Exonic hg19 PRAD TCGA-2A-A8VL 2 5 Out-of-frame Inter-chr p13.2 Transcription factor Seq+ 42837 ChimerSeq STARFusion TCGA_RNA-Seq SERINC5-PPAP2A SERINC5 chr5 79551715 - PPAP2A chr5 54721867 - Exonic hg19 PRAD TCGA-HC-A6AS 43 62 In-Frame Intra-chr q14.1 Seq+ 42838 ChimerSeq STARFusion TCGA_RNA-Seq CHD1-SLCO6A1 CHD1 chr5 98228229 - SLCO6A1 chr5 101748847 - Exonic hg19 PRAD TCGA-HC-A6AP 16 26 In-Frame Intra-chr q21.1 Tumor suppressor gene q21.1 Seq+ 42839 ChimerSeq STARFusion TCGA_RNA-Seq GLO1-KIF6 GLO1 chr6 38670747 - KIF6 chr6 39387779 - Exonic hg19 PRAD TCGA-HC-A6AP 3 5 Out-of-frame Intra-chr p21.2 p21.2 Seq+ 42840 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649522 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-HC-A6AQ 11 33 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 42841 ChimerSeq STARFusion TCGA_RNA-Seq PIEZO1-MNS1 PIEZO1 chr16 88851309 - MNS1 chr15 56756445 - Exonic hg19 PRAD TCGA-V1-A8WL 18 24 Out-of-frame Inter-chr q24.3 q21.3 Seq+ 42842 ChimerSeq STARFusion TCGA_RNA-Seq FBXO34-ATG7 FBXO34 chr14 55738255 + ATG7 chr3 11596285 + Exonic hg19 PRAD TCGA-V1-A8WL 10 10 5'UTR-CDS Inter-chr q22.3 p25.3 Seq+ 42843 ChimerSeq STARFusion TCGA_RNA-Seq PPAP2A-SLC38A9 PPAP2A chr5 54737679 - SLC38A9 chr5 54968523 - Exonic hg19 PRAD TCGA-V1-A8WL 5 27 Out-of-frame Intra-chr q11.2 Seq+ 42844 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1671-SEC14L2 KIAA1671 chr22 25445331 + SEC14L2 chr22 30795632 + Exonic hg19 PRAD TCGA-HC-A9TH 4 10 In-Frame Intra-chr q11.23 q12.2 Tumor suppressor gene Seq+ 42845 ChimerSeq STARFusion TCGA_RNA-Seq CENPN-C16orf62 CENPN chr16 81053881 + C16orf62 chr16 19644414 + Exonic hg19 PRAD TCGA-EJ-5530 6 55 In-Frame Intra-chr q23.2 p12.3 Seq+ 42846 ChimerSeq STARFusion TCGA_RNA-Seq NAA60-IST1 NAA60 chr16 3493827 + IST1 chr16 71949529 + Exonic hg19 PRAD TCGA-EJ-5530 6 44 5'UTR-5'UTR Intra-chr p13.3 q22.2 Seq+ 42847 ChimerSeq STARFusion TCGA_RNA-Seq NAA60-IST1 NAA60 chr16 3497620 + IST1 chr16 71949529 + Exonic hg19 PRAD TCGA-EJ-5530 4 37 5'UTR-5'UTR Intra-chr p13.3 q22.2 Seq+ 42848 ChimerSeq STARFusion TCGA_RNA-Seq NAA60-IST1 NAA60 chr16 3493827 + IST1 chr16 71949529 + Exonic hg19 PRAD TCGA-EJ-5530 5 26 5'UTR-5'UTR Intra-chr p13.3 q22.2 Seq+ 42849 ChimerSeq STARFusion TCGA_RNA-Seq DROSHA-UGT3A2 DROSHA chr5 31526186 - UGT3A2 chr5 36064452 - Exonic hg19 PRAD TCGA-HC-A9TE 5 7 Out-of-frame Intra-chr p13.3 p13.2 Seq+ 42850 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42880008 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-EJ-5501 189 344 5'UTR-CDS Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 42851 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42879877 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-EJ-5501 34 342 In-Frame Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 42852 ChimerSeq STARFusion TCGA_RNA-Seq FAM63B-FOXB1 FAM63B chr15 59102587 + FOXB1 chr15 60333811 + Exonic hg19 PRAD TCGA-EJ-5501 5 55 CDS-3'UTR Intra-chr q22.2 Transcription factor 42853 ChimerSeq STARFusion TCGA_RNA-Seq PARP8-EIF5A2 PARP8 chr5 49963959 + EIF5A2 chr3 170624882 - Exonic hg19 PRAD TCGA-EJ-5501 11 26 Out-of-frame Inter-chr q11.1 q26.2 Seq+ 42854 ChimerSeq STARFusion TCGA_RNA-Seq FAM63B-FOXB1 FAM63B chr15 59102485 + FOXB1 chr15 60333811 + Exonic hg19 PRAD TCGA-EJ-5501 2 55 Out-of-frame Intra-chr q22.2 Transcription factor 42855 ChimerSeq STARFusion TCGA_RNA-Seq MLLT4-CCDC162P MLLT4 chr6 168303066 + CCDC162P chr6 109669630 + Exonic hg19 PRAD TCGA-EJ-5502 12 16 CDS-3'UTR Intra-chr q21 42856 ChimerSeq STARFusion TCGA_RNA-Seq KLK3-TMPRSS11A KLK3 chr19 51361851 + TMPRSS11A chr4 68777221 - Exonic hg19 PRAD TCGA-EJ-5503 70 0 In-Frame Inter-chr q13.33 q13.2 Tumor suppressor gene 42857 ChimerSeq STARFusion TCGA_RNA-Seq TEAD1-MICAL2 TEAD1 chr11 12697108 + MICAL2 chr11 12229570 + Exonic hg19 PRAD TCGA-EJ-5503 20 74 5'UTR-CDS Intra-chr p15.3 Transcription factor p15.3 Seq+ 42858 ChimerSeq STARFusion TCGA_RNA-Seq TEAD1-MICAL2 TEAD1 chr11 12696381 + MICAL2 chr11 12229570 + Exonic hg19 PRAD TCGA-EJ-5503 2 74 5'UTR-CDS Intra-chr p15.3 Transcription factor p15.3 Seq+ 42859 ChimerSeq STARFusion TCGA_RNA-Seq TSC1-CEL TSC1 chr9 135796750 - CEL chr9 135945848 + Exonic hg19 PRAD TCGA-EJ-5503 7 18 In-Frame Intra-chr q34.13 Oncogene Tumor suppressor gene q34.13 Seq+ 42860 ChimerSeq STARFusion TCGA_RNA-Seq TMEM39A-EPHA6 TMEM39A chr3 119171294 - EPHA6 chr3 96706174 + Exonic hg19 PRAD TCGA-EJ-5505 10 17 In-Frame Intra-chr q13.33 q11.2 Seq+ 42861 ChimerSeq STARFusion TCGA_RNA-Seq ATP11B-CARS ATP11B chr3 182563310 + CARS chr11 3026663 - Exonic hg19 PRAD TCGA-EJ-5507 66 535 In-Frame Inter-chr q26.33 Oncogene Seq+ 42862 ChimerSeq STARFusion TCGA_RNA-Seq ATP11B-CARS ATP11B chr3 182566345 + CARS chr11 3026663 - Exonic hg19 PRAD TCGA-EJ-5507 10 495 Out-of-frame Inter-chr q26.33 Oncogene Seq+ 42863 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-PIK3CA TBL1XR1 chr3 176914909 - PIK3CA chr3 178916538 + Exonic hg19 PRAD TCGA-EJ-5507 10 17 5'UTR-5'UTR Intra-chr q26.32 q26.32 Oncogene Seq+ 42864 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-PIK3CA TBL1XR1 chr3 176914128 - PIK3CA chr3 178916538 + Exonic hg19 PRAD TCGA-EJ-5507 3 17 5'UTR-5'UTR Intra-chr q26.32 q26.32 Oncogene Seq+ 42865 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-PIK3CA TBL1XR1 chr3 176878659 - PIK3CA chr3 178916538 + Exonic hg19 PRAD TCGA-EJ-5507 2 17 5'UTR-5'UTR Intra-chr q26.32 q26.32 Oncogene Seq+ 42866 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS15-INTS8 TMPRSS15 chr21 19751600 - INTS8 chr8 95844220 + Exonic hg19 PRAD TCGA-EJ-5507 5 4 Out-of-frame Inter-chr q21.1 q22.1 Seq+ 42867 ChimerSeq STARFusion TCGA_RNA-Seq MSI2-CCDC178 MSI2 chr17 55339553 + CCDC178 chr18 31020045 - Exonic hg19 PRAD TCGA-EJ-5507 2 10 Out-of-frame Inter-chr q22 q12.1 Seq+ 42868 ChimerSeq STARFusion TCGA_RNA-Seq TAB2-PCMT1 TAB2 chr6 149639151 + PCMT1 chr6 150111090 + Exonic hg19 PRAD TCGA-EJ-5508 4 4 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 42869 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC9-JPH1 TRAPPC9 chr8 141034034 - JPH1 chr8 75171738 - Exonic hg19 PRAD TCGA-EJ-5509 8 31 In-Frame Intra-chr q24.3 q21.11 Seq+ 42870 ChimerSeq STARFusion TCGA_RNA-Seq CAMKK2-KDM2B CAMKK2 chr12 121711859 - KDM2B chr12 121932468 - Exonic hg19 PRAD TCGA-EJ-5509 2 31 In-Frame Intra-chr q24.31 q24.31 Transcription factor Seq+ 42871 ChimerSeq STARFusion TCGA_RNA-Seq CAMKK2-KDM2B CAMKK2 chr12 121708701 - KDM2B chr12 121891147 - Exonic hg19 PRAD TCGA-EJ-5509 2 29 In-Frame Intra-chr q24.31 q24.31 Transcription factor Seq+ 42872 ChimerSeq STARFusion TCGA_RNA-Seq DDX60-SPOCK3 DDX60 chr4 169157403 - SPOCK3 chr4 167983688 - Exonic hg19 PRAD TCGA-EJ-5509 3 12 In-Frame Intra-chr q32.3 q32.3 Seq+ 42873 ChimerSeq STARFusion TCGA_RNA-Seq SH3RF1-TLL1 SH3RF1 chr4 170076631 - TLL1 chr4 166946468 + Exonic hg19 PRAD TCGA-EJ-5509 2 14 Out-of-frame Intra-chr q33 q32.3 Seq+ 42874 ChimerSeq STARFusion TCGA_RNA-Seq NFIX-CAPN12 NFIX chr19 13192669 + CAPN12 chr19 39233168 - Exonic hg19 PRAD TCGA-HC-A4ZV 43 278 Out-of-frame Intra-chr p13.13 Transcription factor q13.2 Seq+ 42875 ChimerSeq STARFusion TCGA_RNA-Seq NFIX-CAPN12 NFIX chr19 13192669 + CAPN12 chr19 39233742 - Exonic hg19 PRAD TCGA-HC-A4ZV 19 271 In-Frame Intra-chr p13.13 Transcription factor q13.2 Seq+ 42876 ChimerSeq STARFusion TCGA_RNA-Seq ZFHX3-PMFBP1 ZFHX3 chr16 73092429 - PMFBP1 chr16 72153988 - Exonic hg19 PRAD TCGA-HC-A4ZV 2 11 5'UTR-CDS Intra-chr q22.3 Tumor suppressor gene Transcription factor q22.2 Seq+ 42877 ChimerSeq STARFusion TCGA_RNA-Seq GSK3B-LSAMP GSK3B chr3 119666115 - LSAMP chr3 115738487 - Exonic hg19 PRAD TCGA-HC-A4ZV 2 7 Out-of-frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q13.31 Tumor suppressor gene Seq+ 42878 ChimerSeq STARFusion TCGA_RNA-Seq PTPN1-BCAS4 PTPN1 chr20 49127127 + BCAS4 chr20 49434748 + Exonic hg19 PRAD TCGA-HC-A6HY 7 26 In-Frame Intra-chr q13.13 Tumor suppressor gene q13.13 Seq+ 42879 ChimerSeq STARFusion TCGA_RNA-Seq WDR20-LRP10 WDR20 chr14 102606509 + LRP10 chr14 23341947 + Exonic hg19 PRAD TCGA-2A-A8VT 11 45 Out-of-frame Intra-chr q32.31 q11.2 Seq+ 42880 ChimerSeq STARFusion TCGA_RNA-Seq ABHD17A-TCF3 ABHD17A chr19 1881234 - TCF3 chr19 1646426 - Exonic hg19 PRAD TCGA-2A-A8VT 5 31 Out-of-frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Transcription factor Seq+ 42881 ChimerSeq STARFusion TCGA_RNA-Seq GCN1L1-METTL1 GCN1L1 chr12 120632483 - METTL1 chr12 58165040 - Exonic hg19 PRAD TCGA-2A-A8VT 7 0 Out-of-frame Intra-chr q14.1 Seq+ 42882 ChimerSeq STARFusion TCGA_RNA-Seq KMT2C-NDUFAF4 KMT2C chr7 151854846 - NDUFAF4 chr6 97344723 - Exonic hg19 PRAD TCGA-2A-A8VT 4 10 Out-of-frame Inter-chr q36.1 Oncogene Tumor suppressor gene q16.1 Seq+ 42883 ChimerSeq STARFusion TCGA_RNA-Seq RERE-ZNF345 RERE chr1 8482787 - ZNF345 chr19 37367687 + Exonic hg19 PRAD TCGA-2A-A8VT 3 7 5'UTR-5'UTR Inter-chr p36.23 q13.12 Transcription factor Seq+ 42884 ChimerSeq STARFusion TCGA_RNA-Seq KMT2C-NDUFAF4 KMT2C chr7 151859202 - NDUFAF4 chr6 97344723 - Exonic hg19 PRAD TCGA-2A-A8VT 2 9 Out-of-frame Inter-chr q36.1 Oncogene Tumor suppressor gene q16.1 Seq+ 42885 ChimerSeq STARFusion TCGA_RNA-Seq PPAP2A-CNTLN PPAP2A chr5 54830400 - CNTLN chr9 17484293 + Exonic hg19 PRAD TCGA-2A-A8VV 29 75 Out-of-frame Inter-chr p22.2 Seq+ 42886 ChimerSeq STARFusion TCGA_RNA-Seq MAML3-SCOC MAML3 chr4 141074014 - SCOC chr4 141300275 + Exonic hg19 PRAD TCGA-2A-A8VV 5 19 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 42887 ChimerSeq STARFusion TCGA_RNA-Seq MZT2A-SOD2 MZT2A chr2 132249449 - SOD2 chr6 160106065 - Exonic hg19 PRAD TCGA-2A-A8VV 3 5 In-Frame Inter-chr q21.1 q25.3 Tumor suppressor gene 42888 ChimerSeq STARFusion TCGA_RNA-Seq WWC1-FMN2 WWC1 chr5 167798538 + FMN2 chr1 240341221 + Exonic hg19 PRAD TCGA-2A-A8VX 12 27 Out-of-frame Inter-chr q34 q43 Seq+ 42889 ChimerSeq STARFusion TCGA_RNA-Seq SEPT11-CCNG2 SEPT11 chr4 77871083 + CCNG2 chr4 78079686 + Exonic hg19 PRAD TCGA-HC-7736 2 16 CDS-5'UTR Intra-chr q21.1 q21.1 42890 ChimerSeq STARFusion TCGA_RNA-Seq LYPD6B-LRBA LYPD6B chr2 149975677 + LRBA chr4 151719294 - Exonic hg19 PRAD TCGA-EJ-7782 7 26 5'UTR-CDS Inter-chr q23.2 q31.3 Seq+ 42891 ChimerSeq STARFusion TCGA_RNA-Seq SH3BGRL2-HMGCLL1 SH3BGRL2 chr6 80341223 + HMGCLL1 chr6 55378994 - Exonic hg19 PRAD TCGA-EJ-7782 2 43 In-Frame Intra-chr q14.1 p12.1 Seq+ 42892 ChimerSeq STARFusion TCGA_RNA-Seq SH3BGRL2-HMGCLL1 SH3BGRL2 chr6 80341223 + HMGCLL1 chr6 55381401 - Exonic hg19 PRAD TCGA-EJ-7782 2 42 In-Frame Intra-chr q14.1 p12.1 Seq+ 42893 ChimerSeq STARFusion TCGA_RNA-Seq IL1RAPL2-STK39 IL1RAPL2 chrX 104478688 + STK39 chr2 168821236 - Exonic hg19 PRAD TCGA-EJ-7782 6 15 Out-of-frame Inter-chr q22.3 q24.3 Seq+ 42894 ChimerSeq STARFusion TCGA_RNA-Seq TXNDC5-RREB1 TXNDC5 chr6 7895339 - RREB1 chr6 7176888 + Exonic hg19 PRAD TCGA-EJ-7782 3 20 CDS-5'UTR Intra-chr p24.3 p24.3 Transcription factor Seq+ 42895 ChimerSeq STARFusion TCGA_RNA-Seq PKHD1-CAGE1 PKHD1 chr6 51875107 - CAGE1 chr6 7334323 - Exonic hg19 PRAD TCGA-EJ-7782 4 5 Out-of-frame Intra-chr p12.2 Oncogene p24.3 Seq+ 42896 ChimerSeq STARFusion TCGA_RNA-Seq RASA1-CDH12 RASA1 chr5 86564807 + CDH12 chr5 22212752 - Exonic hg19 PRAD TCGA-EJ-7782 3 8 CDS-5'UTR Intra-chr q14.3 p14.3 Seq+ 42897 ChimerSeq STARFusion TCGA_RNA-Seq LEO1-FBN1 LEO1 chr15 52263885 - FBN1 chr15 48830005 - Exonic hg19 PRAD TCGA-EJ-7783 5 14 In-Frame Intra-chr q21.2 q21.1 Seq+ 42898 ChimerSeq STARFusion TCGA_RNA-Seq IREB2-LEO1 IREB2 chr15 78781113 + LEO1 chr15 52258701 - Exonic hg19 PRAD TCGA-EJ-7783 4 6 Out-of-frame Intra-chr q25.1 q21.2 Seq+ 42899 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42880008 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-EJ-7788 87 1400 5'UTR-CDS Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 42900 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42870046 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-EJ-7788 26 1362 Out-of-frame Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 42901 ChimerSeq STARFusion TCGA_RNA-Seq ITPR2-CLEC2A ITPR2 chr12 26703180 - CLEC2A chr12 10074831 - Exonic hg19 PRAD TCGA-EJ-7788 15 60 Out-of-frame Intra-chr p11.23 p13.31 Seq+ 42902 ChimerSeq STARFusion TCGA_RNA-Seq SLC30A6-GNA11 SLC30A6 chr2 32396442 + GNA11 chr19 3110147 + Exonic hg19 PRAD TCGA-CH-5754 18 53 Out-of-frame Inter-chr p22.3 p13.3 Oncogene Seq+ 42903 ChimerSeq STARFusion TCGA_RNA-Seq GNA11-SLC30A6 GNA11 chr19 3094785 + SLC30A6 chr2 32400388 + Exonic hg19 PRAD TCGA-CH-5754 6 46 In-Frame Inter-chr p13.3 Oncogene p22.3 Seq+ 42904 ChimerSeq STARFusion TCGA_RNA-Seq PPAP2A-SLC38A9 PPAP2A chr5 54830400 - SLC38A9 chr5 55000262 - Exonic hg19 PRAD TCGA-CH-5754 2 13 CDS-5'UTR Intra-chr q11.2 Seq+ 42905 ChimerSeq STARFusion TCGA_RNA-Seq PPAP2A-SLC38A9 PPAP2A chr5 54771127 - SLC38A9 chr5 54993820 - Exonic hg19 PRAD TCGA-CH-5754 2 13 CDS-5'UTR Intra-chr q11.2 Seq+ 42906 ChimerSeq STARFusion TCGA_RNA-Seq MAST2-LINC00505 MAST2 chr1 46348067 + LINC00505 chr1 46947882 + Exonic hg19 PRAD TCGA-CH-5751 13 77 Out-of-frame Intra-chr p34.1 AGC:MAST 42907 ChimerSeq STARFusion TCGA_RNA-Seq MAST2-LINC00505 MAST2 chr1 46383205 + LINC00505 chr1 46947882 + Exonic hg19 PRAD TCGA-CH-5751 4 75 Out-of-frame Intra-chr p34.1 AGC:MAST 42908 ChimerSeq STARFusion TCGA_RNA-Seq ACSL3-SGPP2 ACSL3 chr2 223725976 + SGPP2 chr2 223386486 + Exonic hg19 PRAD TCGA-CH-5751 15 22 5'UTR-CDS Intra-chr q36.1 q36.1 Seq+ 42909 ChimerSeq STARFusion TCGA_RNA-Seq SEC23B-CSRP2BP SEC23B chr20 18496380 + CSRP2BP chr20 18162354 + Exonic hg19 PRAD TCGA-CH-5751 15 21 In-Frame Intra-chr p11.23 Seq+ 42910 ChimerSeq STARFusion TCGA_RNA-Seq TARS2-MRPS21 TARS2 chr1 150463201 + MRPS21 chr1 150280482 + Exonic hg19 PRAD TCGA-CH-5751 10 17 In-Frame Intra-chr q21.2 q21.2 Seq+ 42911 ChimerSeq STARFusion TCGA_RNA-Seq TRIM33-CSDE1 TRIM33 chr1 114945382 - CSDE1 chr1 115282511 - Exonic hg19 PRAD TCGA-CH-5751 6 18 In-Frame Intra-chr p13.2 Oncogene p13.2 Seq+ 42912 ChimerSeq STARFusion TCGA_RNA-Seq RPL23-BRD2 RPL23 chr17 37008857 - BRD2 chr6 32939372 + Exonic hg19 PRAD TCGA-CH-5751 6 4 CDS-5'UTR Inter-chr q12 Atypical:BRD Seq+ 42913 ChimerSeq STARFusion TCGA_RNA-Seq GNAQ-VEPH1 GNAQ chr9 80409379 - VEPH1 chr3 156983451 - Exonic hg19 PRAD TCGA-CH-5751 3 14 Out-of-frame Inter-chr q21.2 Oncogene q25.32 Seq+ 42914 ChimerSeq STARFusion TCGA_RNA-Seq FOXK1-SDK1 FOXK1 chr7 4722499 + SDK1 chr7 3861082 + Exonic hg19 PRAD TCGA-CH-5751 3 9 In-Frame Intra-chr p22.1 Transcription factor p22.2 Seq+ 42915 ChimerSeq STARFusion TCGA_RNA-Seq AP3B2-HOMER2 AP3B2 chr15 83378346 - HOMER2 chr15 83561593 - Exonic hg19 PRAD TCGA-CH-5751 2 10 In-Frame Intra-chr q25.2 q25.2 Tumor suppressor gene Seq+ 42916 ChimerSeq STARFusion TCGA_RNA-Seq FLJ27365-WNT7B FLJ27365 chr22 46449800 + WNT7B chr22 46346026 - Exonic hg19 PRAD TCGA-CH-5751 2 8 Out-of-frame Intra-chr q13.31 42917 ChimerSeq STARFusion TCGA_RNA-Seq FLJ27365-WNT7B FLJ27365 chr22 46476535 + WNT7B chr22 46346026 - Exonic hg19 PRAD TCGA-CH-5751 2 8 Out-of-frame Intra-chr q13.31 42918 ChimerSeq STARFusion TCGA_RNA-Seq ERCC6L2-ATP8A1 ERCC6L2 chr9 98718295 + ATP8A1 chr4 42526864 - Exonic hg19 PRAD TCGA-CH-5751 2 6 In-Frame Inter-chr q22.32 p13 Seq+ 42919 ChimerSeq STARFusion TCGA_RNA-Seq MAST2-LINC00505 MAST2 chr1 46348067 + LINC00505 chr1 46947882 + Exonic hg19 PRAD TCGA-CH-5750 9 22 Out-of-frame Intra-chr p34.1 AGC:MAST 42920 ChimerSeq STARFusion TCGA_RNA-Seq TYW1-WBSCR17 TYW1 chr7 66582605 + WBSCR17 chr7 71142196 + Exonic hg19 PRAD TCGA-CH-5750 7 20 In-Frame Intra-chr q11.21 q11.22 Seq+ 42921 ChimerSeq STARFusion TCGA_RNA-Seq PDE4D-DEPDC1B PDE4D chr5 59481384 - DEPDC1B chr5 59983054 - Exonic hg19 PRAD TCGA-CH-5750 6 19 In-Frame Intra-chr q12.1 q12.1 Seq+ 42922 ChimerSeq STARFusion TCGA_RNA-Seq TRIM33-CSDE1 TRIM33 chr1 114945382 - CSDE1 chr1 115282511 - Exonic hg19 PRAD TCGA-CH-5750 5 9 In-Frame Intra-chr p13.2 Oncogene p13.2 Seq+ 42923 ChimerSeq STARFusion TCGA_RNA-Seq ACSL3-SGPP2 ACSL3 chr2 223725976 + SGPP2 chr2 223386486 + Exonic hg19 PRAD TCGA-CH-5750 5 5 5'UTR-CDS Intra-chr q36.1 q36.1 Seq+ 42924 ChimerSeq STARFusion TCGA_RNA-Seq SEC23B-CSRP2BP SEC23B chr20 18496380 + CSRP2BP chr20 18162354 + Exonic hg19 PRAD TCGA-CH-5750 3 6 In-Frame Intra-chr p11.23 Seq+ 42925 ChimerSeq STARFusion TCGA_RNA-Seq INTS7-DTL INTS7 chr1 212208686 - DTL chr1 212236226 + Exonic hg19 PRAD TCGA-CH-5752 16 32 In-Frame Intra-chr q32.3 q32.3 Seq+ 42926 ChimerSeq STARFusion TCGA_RNA-Seq NET1-ACSM3 NET1 chr10 5471192 + ACSM3 chr16 20807692 + Exonic hg19 PRAD TCGA-CH-5752 6 30 In-Frame Inter-chr p15.1 p12.3 Seq+ 42927 ChimerSeq STARFusion TCGA_RNA-Seq WDR34-PCA3 WDR34 chr9 131402970 - PCA3 chr9 79399199 + Exonic hg19 PRAD TCGA-HC-A631 161 744 CDS-5'UTR Intra-chr q34.11 q21.2 Seq+ 42928 ChimerSeq STARFusion TCGA_RNA-Seq HDLBP-TMC1 HDLBP chr2 242186471 - TMC1 chr9 75445367 + Exonic hg19 PRAD TCGA-HC-A631 62 644 Out-of-frame Inter-chr q37.3 q21.13 Seq+ 42929 ChimerSeq STARFusion TCGA_RNA-Seq TTC32-HDLBP TTC32 chr2 20101237 - HDLBP chr2 242170359 - Exonic hg19 PRAD TCGA-HC-A631 42 305 Out-of-frame Intra-chr p24.1 q37.3 Seq+ 42930 ChimerSeq STARFusion TCGA_RNA-Seq SLC22A23-CAMTA1 SLC22A23 chr6 3410422 - CAMTA1 chr1 6880241 + Exonic hg19 PRAD TCGA-HC-A632 15 104 Out-of-frame Inter-chr p25.2 p36.31 Tumor suppressor gene Transcription factor Seq+ 42931 ChimerSeq STARFusion TCGA_RNA-Seq SLC22A23-CAMTA1 SLC22A23 chr6 3410422 - CAMTA1 chr1 6885152 + Exonic hg19 PRAD TCGA-HC-A632 9 103 In-Frame Inter-chr p25.2 p36.31 Tumor suppressor gene Transcription factor Seq+ 42932 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF4-ZNF423 TM9SF4 chr20 30723976 + ZNF423 chr16 49823457 - Exonic hg19 PRAD TCGA-HC-A632 13 57 In-Frame Inter-chr q11.21 q12.1 Transcription factor Seq+ 42933 ChimerSeq STARFusion TCGA_RNA-Seq VPS29-SVOP VPS29 chr12 110939854 - SVOP chr12 109306517 - Exonic hg19 PRAD TCGA-HC-A632 7 24 In-Frame Intra-chr q24.11 q24.11 Seq+ 42934 ChimerSeq STARFusion TCGA_RNA-Seq VPS29-SVOP VPS29 chr12 110937340 - SVOP chr12 109306517 - Exonic hg19 PRAD TCGA-HC-A632 4 24 In-Frame Intra-chr q24.11 q24.11 Seq+ 42935 ChimerSeq STARFusion TCGA_RNA-Seq SLC10A7-EYS SLC10A7 chr4 147442770 - EYS chr6 65767620 - Exonic hg19 PRAD TCGA-HC-A632 2 7 In-Frame Inter-chr q31.22 q12 Seq+ 42936 ChimerSeq STARFusion TCGA_RNA-Seq PTEN-C1orf226 PTEN chr10 89653866 + C1orf226 chr1 162352972 + Exonic hg19 PRAD TCGA-VP-A87J 26 87 In-Frame Inter-chr q23.31 Oncogene Tumor suppressor gene q23.3 Seq+ 42937 ChimerSeq STARFusion TCGA_RNA-Seq PTEN-NOS1AP PTEN chr10 89653866 + NOS1AP chr1 162352972 + Exonic hg19 PRAD TCGA-VP-A87J 26 87 CDS-3'UTR Inter-chr q23.31 Oncogene Tumor suppressor gene q23.3 42938 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF12-GRIK4 ARHGEF12 chr11 120207984 + GRIK4 chr11 120811056 + Exonic hg19 PRAD TCGA-VP-A87J 7 66 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Seq+ 42939 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF12-GRIK4 ARHGEF12 chr11 120207984 + GRIK4 chr11 120775999 + Exonic hg19 PRAD TCGA-VP-A87J 2 66 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Seq+ 42940 ChimerSeq STARFusion TCGA_RNA-Seq PI4KA-FAM175A PI4KA chr22 21147481 - FAM175A chr4 84403397 - Exonic hg19 PRAD TCGA-VP-A87J 6 11 In-Frame Inter-chr q11.21 q21.23 Seq+ 42941 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0907-ASH1L KIAA0907 chr1 155903424 - ASH1L chr1 155429689 - Exonic hg19 PRAD TCGA-VP-A87J 4 18 Out-of-frame Intra-chr q22 q22 Transcription factor Seq+ 42942 ChimerSeq STARFusion TCGA_RNA-Seq H2AFV-CDC45 H2AFV chr7 44882876 - CDC45 chr22 19467681 + Exonic hg19 PRAD TCGA-VP-A87J 2 14 In-Frame Inter-chr p13 q11.21 Seq+ 42943 ChimerSeq STARFusion TCGA_RNA-Seq DHX9-PRELID1 DHX9 chr1 182850782 + PRELID1 chr5 176733423 + Exonic hg19 PRAD TCGA-TK-A8OK 20 161 In-Frame Inter-chr q25.3 q35.3 Seq+ 42944 ChimerSeq STARFusion TCGA_RNA-Seq FASN-NUCKS1 FASN chr17 80038807 - NUCKS1 chr1 205687133 - Exonic hg19 PRAD TCGA-TK-A8OK 9 29 Out-of-frame Inter-chr q25.3 q32.1 Seq+ 42945 ChimerSeq STARFusion TCGA_RNA-Seq AFF4-SNTG2 AFF4 chr5 132227856 - SNTG2 chr2 1204789 + Exonic hg19 PRAD TCGA-TK-A8OK 7 23 In-Frame Inter-chr q31.1 Seq+ 42946 ChimerSeq STARFusion TCGA_RNA-Seq NPTXR-GTPBP1 NPTXR chr22 39219088 - GTPBP1 chr22 39104850 + Exonic hg19 PRAD TCGA-TK-A8OK 3 6 In-Frame Intra-chr q13.1 q13.1 Seq+ 42947 ChimerSeq STARFusion TCGA_RNA-Seq LAMA3-COX8C LAMA3 chr18 21427632 + COX8C chr14 93814374 + Exonic hg19 PRAD TCGA-G9-6329 2 17 Out-of-frame Inter-chr q11.2 Seq+ 42948 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R2A-MTUS1 PPP2R2A chr8 26151256 + MTUS1 chr8 17504588 - Exonic hg19 PRAD TCGA-EJ-7328 14 62 Out-of-frame Intra-chr p21.2 p22 Tumor suppressor gene Seq+ 42949 ChimerSeq STARFusion TCGA_RNA-Seq GPBP1-MTRR GPBP1 chr5 56527148 + MTRR chr5 7870883 + Exonic hg19 PRAD TCGA-EJ-7327 12 73 Out-of-frame Intra-chr q11.2 Transcription factor p15.31 Oncogene Seq+ 42950 ChimerSeq STARFusion TCGA_RNA-Seq GPBP1-MTRR GPBP1 chr5 56527148 + MTRR chr5 7889208 + Exonic hg19 PRAD TCGA-EJ-7327 12 72 In-Frame Intra-chr q11.2 Transcription factor p15.31 Oncogene Seq+ 42951 ChimerSeq STARFusion TCGA_RNA-Seq MBOAT2-ADI1 MBOAT2 chr2 9143669 - ADI1 chr2 3504764 - Exonic hg19 PRAD TCGA-EJ-7325 23 74 In-Frame Intra-chr p25.1 Seq+ 42952 ChimerSeq STARFusion TCGA_RNA-Seq FIP1L1-SLC38A8 FIP1L1 chr4 54306775 + SLC38A8 chr16 84046657 - Exonic hg19 PRAD TCGA-EJ-A65B 45 151 In-Frame Inter-chr q12 q23.3 Seq+ 42953 ChimerSeq STARFusion TCGA_RNA-Seq FIP1L1-SLC38A8 FIP1L1 chr4 54294350 + SLC38A8 chr16 84046657 - Exonic hg19 PRAD TCGA-EJ-A65B 6 143 In-Frame Inter-chr q12 q23.3 Seq+ 42954 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38075947 + MIPOL1 chr14 38016110 + Exonic hg19 PRAD TCGA-EJ-A65B 4 9 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 42955 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38075947 + MIPOL1 chr14 37969113 + Exonic hg19 PRAD TCGA-EJ-A65B 4 8 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 42956 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-POLR3A TTC6 chr14 38065213 + POLR3A chr10 79764646 - Exonic hg19 PRAD TCGA-ZG-A9N3 12 14 Out-of-frame Inter-chr q21.1 q22.3 Seq+ 42957 ChimerSeq STARFusion TCGA_RNA-Seq GDE1-TIAL1 GDE1 chr16 19528336 - TIAL1 chr10 121347760 - Exonic hg19 PRAD TCGA-ZG-A9N3 7 25 In-Frame Inter-chr p12.3 q26.11 Seq+ 42958 ChimerSeq STARFusion TCGA_RNA-Seq POLR3A-TTC6 POLR3A chr10 79767460 - TTC6 chr14 38310650 + Exonic hg19 PRAD TCGA-ZG-A9N3 6 10 Out-of-frame Inter-chr q22.3 q21.1 Seq+ 42959 ChimerSeq STARFusion TCGA_RNA-Seq POLR3A-CNR2 POLR3A chr10 79764474 - CNR2 chr1 24275992 - Exonic hg19 PRAD TCGA-ZG-A9N3 5 13 CDS-5'UTR Inter-chr q22.3 p36.11 42960 ChimerSeq STARFusion TCGA_RNA-Seq ZNF789-RPL37A ZNF789 chr7 99077410 + RPL37A chr2 217393993 + Exonic hg19 PRAD TCGA-ZG-A9N3 2 15 CDS-3'UTR Inter-chr q22.1 Transcription factor q35 Seq+ 42961 ChimerSeq STARFusion TCGA_RNA-Seq ZNF789-RPL37A ZNF789 chr7 99077410 + RPL37A chr2 217384055 + Exonic hg19 PRAD TCGA-ZG-A9N3 2 15 CDS-3'UTR Inter-chr q22.1 Transcription factor q35 Seq+ 42962 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649522 - ETV1 chr7 14017105 - Exonic hg19 PRAD TCGA-J4-A83M 101 563 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 42963 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649522 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-J4-A83N 41 248 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 42964 ChimerSeq STARFusion TCGA_RNA-Seq FOXP1-COQ10B FOXP1 chr3 71090479 - COQ10B chr2 198334794 + Exonic hg19 PRAD TCGA-J4-A83N 2 8 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor q33.1 Seq+ 42965 ChimerSeq STARFusion TCGA_RNA-Seq CASZ1-DLEU1 CASZ1 chr1 10753931 - DLEU1 chr13 51102002 + Exonic hg19 PRAD TCGA-J4-A83I 53 185 CDS-3'UTR Inter-chr p36.22 Transcription factor q14.2 Tumor suppressor gene Seq+ 42966 ChimerSeq STARFusion TCGA_RNA-Seq ATAD1-JMJD1C ATAD1 chr10 89530709 - JMJD1C chr10 64968995 - Exonic hg19 PRAD TCGA-J4-A83I 8 6 In-Frame Intra-chr q21.3 Seq+ 42967 ChimerSeq STARFusion TCGA_RNA-Seq JMJD1C-ANK3 JMJD1C chr10 65024411 - ANK3 chr10 62374982 - Exonic hg19 PRAD TCGA-J4-A83I 2 29 In-Frame Intra-chr q21.3 q21.2 Seq+ 42968 ChimerSeq STARFusion TCGA_RNA-Seq PTEN-KCNMB4 PTEN chr10 89720875 + KCNMB4 chr12 70793989 + Exonic hg19 PRAD TCGA-J4-A83I 4 17 In-Frame Inter-chr q23.31 Oncogene Tumor suppressor gene q15 Seq+ 42969 ChimerSeq STARFusion TCGA_RNA-Seq CCT7-WDPCP CCT7 chr2 73471843 + WDPCP chr2 63938725 - Exonic hg19 PRAD TCGA-J4-A83I 3 18 5'UTR-5'UTR Intra-chr p13.2 p15 Seq+ 42970 ChimerSeq STARFusion TCGA_RNA-Seq KCNMB4-RTKN2 KCNMB4 chr12 70760850 + RTKN2 chr10 63996022 - Exonic hg19 PRAD TCGA-J4-A83I 2 21 Out-of-frame Inter-chr q15 q21.2 Seq+ 42971 ChimerSeq STARFusion TCGA_RNA-Seq GRM7-MBD2 GRM7 chr3 7188355 + MBD2 chr18 51731527 - Exonic hg19 PRAD TCGA-J4-A83I 2 9 Out-of-frame Inter-chr p26.1 q21.2 Transcription factor Seq+ 42972 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS17-RTKN2 ADAMTS17 chr15 100537590 - RTKN2 chr10 64022580 - Exonic hg19 PRAD TCGA-J4-A83I 2 8 In-Frame Inter-chr q26.3 q21.2 Seq+ 42973 ChimerSeq STARFusion TCGA_RNA-Seq WWC1-SNTG2 WWC1 chr5 167841595 + SNTG2 chr2 1161234 + Exonic hg19 PRAD TCGA-J4-A83J 16 41 Out-of-frame Inter-chr q34 Seq+ 42974 ChimerSeq STARFusion TCGA_RNA-Seq NCKAP1-LYPD6B NCKAP1 chr2 183888534 - LYPD6B chr2 149987397 + Exonic hg19 PRAD TCGA-J4-A83J 16 40 CDS-5'UTR Intra-chr q32.1 q23.2 Seq+ 42975 ChimerSeq STARFusion TCGA_RNA-Seq NCKAP1-LYPD6B NCKAP1 chr2 183888534 - LYPD6B chr2 150017278 + Exonic hg19 PRAD TCGA-J4-A83J 3 39 Out-of-frame Intra-chr q32.1 q23.2 Seq+ 42976 ChimerSeq STARFusion TCGA_RNA-Seq NCKAP1-LYPD6B NCKAP1 chr2 183888534 - LYPD6B chr2 150061767 + Exonic hg19 PRAD TCGA-J4-A83J 3 39 Out-of-frame Intra-chr q32.1 q23.2 Seq+ 42977 ChimerSeq STARFusion TCGA_RNA-Seq GULP1-NCKAP1 GULP1 chr2 189248616 + NCKAP1 chr2 183853914 - Exonic hg19 PRAD TCGA-J4-A83J 5 23 5'UTR-CDS Intra-chr q32.1 q32.1 Seq+ 42978 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS9-SYNPR ADAMTS9 chr3 64579934 - SYNPR chr3 63542219 + Exonic hg19 PRAD TCGA-J4-A83J 3 11 Out-of-frame Intra-chr p14.1 Tumor suppressor gene p14.2 Seq+ 42979 ChimerSeq STARFusion TCGA_RNA-Seq CAMKK2-KDM2B CAMKK2 chr12 121707331 - KDM2B chr12 121932468 - Exonic hg19 PRAD TCGA-EJ-A46B 3 3 In-Frame Intra-chr q24.31 q24.31 Transcription factor Seq+ 42980 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-C11orf80 KDM2A chr11 66888829 + C11orf80 chr11 66555631 + Exonic hg19 PRAD TCGA-EJ-A46G 52 247 Out-of-frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 42981 ChimerSeq STARFusion TCGA_RNA-Seq LPHN2-AK5 LPHN2 chr1 82302742 + AK5 chr1 77759478 + Exonic hg19 PRAD TCGA-EJ-A46G 54 188 In-Frame Intra-chr p31.1 Seq+ 42982 ChimerSeq STARFusion TCGA_RNA-Seq EEF2-SLC25A23 EEF2 chr19 3983108 - SLC25A23 chr19 6436475 - Exonic hg19 PRAD TCGA-EJ-A46G 27 258 CDS-3'UTR Intra-chr p13.3 p13.3 Seq+ 42983 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-C11orf80 KDM2A chr11 66888829 + C11orf80 chr11 66563752 + Exonic hg19 PRAD TCGA-EJ-A46G 20 232 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 42984 ChimerSeq STARFusion TCGA_RNA-Seq EEF2-SLC25A23 EEF2 chr19 3983108 - SLC25A23 chr19 6436479 - Exonic hg19 PRAD TCGA-EJ-A46G 11 258 CDS-3'UTR Intra-chr p13.3 p13.3 Seq+ 42985 ChimerSeq STARFusion TCGA_RNA-Seq FRYL-OCIAD2 FRYL chr4 48686690 - OCIAD2 chr4 48887582 - Exonic hg19 PRAD TCGA-EJ-A46G 14 179 5'UTR-CDS Intra-chr p11 p11 Seq+ 42986 ChimerSeq STARFusion TCGA_RNA-Seq FRYL-OCIAD2 FRYL chr4 48503640 - OCIAD2 chr4 48906628 - Exonic hg19 PRAD TCGA-EJ-A46G 6 177 CDS-5'UTR Intra-chr p11 p11 Seq+ 42987 ChimerSeq STARFusion TCGA_RNA-Seq EHMT1-RABL6 EHMT1 chr9 140513501 + RABL6 chr9 139730194 + Exonic hg19 PRAD TCGA-EJ-A46G 41 17 Out-of-frame Intra-chr q34.3 q34.3 42988 ChimerSeq STARFusion TCGA_RNA-Seq ARID1A-HMGN2 ARID1A chr1 27024031 + HMGN2 chr1 26799974 + Exonic hg19 PRAD TCGA-EJ-A46G 24 72 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 Seq+ 42989 ChimerSeq STARFusion TCGA_RNA-Seq EHMT1-GRIN1 EHMT1 chr9 140707982 + GRIN1 chr9 140036465 + Exonic hg19 PRAD TCGA-EJ-A46G 10 47 In-Frame Intra-chr q34.3 q34.3 Seq+ 42990 ChimerSeq STARFusion TCGA_RNA-Seq FAM160B1-VTI1A FAM160B1 chr10 116596005 + VTI1A chr10 114427977 + Exonic hg19 PRAD TCGA-EJ-A46G 10 34 Out-of-frame Intra-chr q25.3 q25.2 Seq+ 42991 ChimerSeq STARFusion TCGA_RNA-Seq PAK1-NARS2 PAK1 chr11 77184597 - NARS2 chr11 78282489 - Exonic hg19 PRAD TCGA-EJ-A46G 8 29 5'UTR-5'UTR Intra-chr q14.1 STE:STE20 q14.1 Seq+ 42992 ChimerSeq STARFusion TCGA_RNA-Seq NEMF-VCPKMT NEMF chr14 50255864 - VCPKMT chr14 50576431 - Exonic hg19 PRAD TCGA-EJ-A46G 7 22 Out-of-frame Intra-chr q21.3 q21.3 42993 ChimerSeq STARFusion TCGA_RNA-Seq ROCK2-NTSR2 ROCK2 chr2 11484122 - NTSR2 chr2 11798848 - Exonic hg19 PRAD TCGA-EJ-A46G 4 30 Out-of-frame Intra-chr p25.1 AGC:DMPK p25.1 Seq+ 42994 ChimerSeq STARFusion TCGA_RNA-Seq ARPC1A-TRRAP ARPC1A chr7 98931040 + TRRAP chr7 98579392 + Exonic hg19 PRAD TCGA-EJ-A46G 6 15 In-Frame Intra-chr q22.1 q22.1 Atypical:PIKK Oncogene Seq+ 42995 ChimerSeq STARFusion TCGA_RNA-Seq GOLGA4-MLH1 GOLGA4 chr3 37343823 + MLH1 chr3 37058997 + Exonic hg19 PRAD TCGA-EJ-A46G 5 18 In-Frame Intra-chr p22.2 p22.2 Oncogene Tumor suppressor gene Seq+ 42996 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-LSAMP ZBTB20 chr3 114519948 - LSAMP chr3 116728221 - Exonic hg19 PRAD TCGA-EJ-A46G 2 29 5'UTR-5'UTR Intra-chr q13.31 Transcription factor q13.31 Tumor suppressor gene Seq+ 42997 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-LSAMP ZBTB20 chr3 114429115 - LSAMP chr3 116163802 - Exonic hg19 PRAD TCGA-EJ-A46G 2 29 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.31 Tumor suppressor gene Seq+ 42998 ChimerSeq STARFusion TCGA_RNA-Seq ARID1A-TRMT5 ARID1A chr1 27024031 + TRMT5 chr14 61439169 - Exonic hg19 PRAD TCGA-EJ-A46G 3 24 CDS-3'UTR Inter-chr p36.11 Oncogene Tumor suppressor gene q23.1 42999 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L3-WDR62 SIPA1L3 chr19 38643607 + WDR62 chr19 36549682 + Exonic hg19 PRAD TCGA-EJ-A46G 5 9 Out-of-frame Intra-chr q13.13 q13.12 Seq+ 43000 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-FAM177A1 TTC6 chr14 38075947 + FAM177A1 chr14 35522484 + Exonic hg19 PRAD TCGA-EJ-A46G 3 15 Out-of-frame Intra-chr q21.1 q13.2 Seq+ 43001 ChimerSeq STARFusion TCGA_RNA-Seq GATSL2-SBDSP1 GATSL2 chr7 74867229 - SBDSP1 chr7 72301272 + Exonic hg19 PRAD TCGA-EJ-A46G 4 9 CDS-5'UTR Intra-chr q11.23 43002 ChimerSeq STARFusion TCGA_RNA-Seq CHST8-PDCD5 CHST8 chr19 34113202 + PDCD5 chr19 33073101 + Exonic hg19 PRAD TCGA-EJ-A46G 2 15 5'UTR-CDS Intra-chr q13.11 q13.11 Tumor suppressor gene Seq+ 43003 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-FAM177A1 TTC6 chr14 38092208 + FAM177A1 chr14 35522484 + Exonic hg19 PRAD TCGA-EJ-A46G 2 15 Out-of-frame Intra-chr q21.1 q13.2 Seq+ 43004 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-KIAA0391 TTC6 chr14 38075947 + KIAA0391 chr14 35735933 + Exonic hg19 PRAD TCGA-EJ-A46G 2 15 Out-of-frame Intra-chr q21.1 q13.2 Seq+ 43005 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-KIAA0391 TTC6 chr14 38075947 + KIAA0391 chr14 35735933 + Exonic hg19 PRAD TCGA-EJ-A46G 2 15 Out-of-frame Intra-chr q21.1 q13.2 Seq+ 43006 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC10-UBASH3A TRAPPC10 chr21 45504144 + UBASH3A chr21 43833133 + Exonic hg19 PRAD TCGA-EJ-A46G 4 3 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 43007 ChimerSeq STARFusion TCGA_RNA-Seq KLK3-TMPRSS11A KLK3 chr19 51361851 + TMPRSS11A chr4 68777221 - Exonic hg19 PRAD TCGA-EJ-A46F 46 0 In-Frame Inter-chr q13.33 q13.2 Tumor suppressor gene 43008 ChimerSeq STARFusion TCGA_RNA-Seq CSGALNACT1-TMEM150A CSGALNACT1 chr8 19315937 - TMEM150A chr2 85826825 - Exonic hg19 PRAD TCGA-EJ-A46F 7 26 Out-of-frame Inter-chr p21.3 p11.2 Seq+ 43009 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-MGST2 ACTN4 chr19 39138547 + MGST2 chr4 140616351 + Exonic hg19 PRAD TCGA-EJ-A46E 2 6 Out-of-frame Inter-chr q31.1 Seq+ 43010 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGH@ HOMER2 chr15 83561493 - IGH@ chr14 106175004 - Exonic hg19 PRAD TCGA-EJ-A46H 6 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene 32.33 43011 ChimerSeq STARFusion TCGA_RNA-Seq FOXA1-AIMP1 FOXA1 chr14 38060605 - AIMP1 chr4 107258026 + Exonic hg19 PRAD TCGA-KK-A7B4 20 52 Out-of-frame Inter-chr q21.1 Tumor suppressor gene Transcription factor q24 Tumor suppressor gene Seq+ 43012 ChimerSeq STARFusion TCGA_RNA-Seq NRF1-MLXIPL NRF1 chr7 129251665 + MLXIPL chr7 73030507 - Exonic hg19 PRAD TCGA-KK-A7B4 10 73 5'UTR-CDS Intra-chr q32.2 Tumor suppressor gene Transcription factor q11.23 Transcription factor Seq+ 43013 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-AKAP7 VPS13B chr8 100148980 + AKAP7 chr6 131602670 + Exonic hg19 PRAD TCGA-KK-A7B4 9 32 In-Frame Inter-chr q22.2 q23.2 Seq+ 43014 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-AKAP7 VPS13B chr8 100148980 + AKAP7 chr6 131603539 + Exonic hg19 PRAD TCGA-KK-A7B4 3 31 CDS-3'UTR Inter-chr q22.2 q23.2 Seq+ 43015 ChimerSeq STARFusion TCGA_RNA-Seq POLR2J3-LGALS4 POLR2J3 chr7 102207444 - LGALS4 chr19 39297235 - Exonic hg19 PRAD TCGA-KK-A7B4 5 18 3'UTR-CDS Inter-chr q22.1 Seq+ 43016 ChimerSeq STARFusion TCGA_RNA-Seq ZRANB3-TMEM163 ZRANB3 chr2 136288697 - TMEM163 chr2 135309662 - Exonic hg19 PRAD TCGA-KK-A7B4 6 8 5'UTR-CDS Intra-chr q21.3 q21.3 Seq+ 43017 ChimerSeq STARFusion TCGA_RNA-Seq SNHG6-EPHX1 SNHG6 chr8 67837672 - EPHX1 chr1 226016426 + Exonic hg19 PRAD TCGA-KK-A7B4 3 12 3'UTR-5'UTR Inter-chr q13.1 q42.12 Seq+ 43018 ChimerSeq STARFusion TCGA_RNA-Seq ZRANB3-TMEM163 ZRANB3 chr2 136288096 - TMEM163 chr2 135309662 - Exonic hg19 PRAD TCGA-KK-A7B4 3 8 5'UTR-CDS Intra-chr q21.3 q21.3 Seq+ 43019 ChimerSeq STARFusion TCGA_RNA-Seq SRRM2-SNRPE SRRM2 chr16 2810500 + SNRPE chr1 203839005 + Exonic hg19 PRAD TCGA-V1-A8X3 46 185 Out-of-frame Inter-chr p13.3 q32.1 Seq+ 43020 ChimerSeq STARFusion TCGA_RNA-Seq SPATS2-PPM1H SPATS2 chr12 49854820 + PPM1H chr12 63226059 - Exonic hg19 PRAD TCGA-V1-A8X3 3 7 Out-of-frame Intra-chr q13.12 q14.2 Seq+ 43021 ChimerSeq STARFusion TCGA_RNA-Seq FAM35A-PTEN FAM35A chr10 88855005 + PTEN chr10 89685270 + Exonic hg19 PRAD TCGA-ZG-A9L9 4 3 5'UTR-CDS Intra-chr q23.2 q23.31 Oncogene Tumor suppressor gene Seq+ 43022 ChimerSeq STARFusion TCGA_RNA-Seq TFAP2A-CDK5RAP1 TFAP2A chr6 10402725 - CDK5RAP1 chr20 31958435 - Exonic hg19 PRAD TCGA-ZG-A9L9 3 5 In-Frame Inter-chr p24.3 Tumor suppressor gene Transcription factor q11.21 Seq+ 43023 ChimerSeq STARFusion TCGA_RNA-Seq MTMR2-TCP11L1 MTMR2 chr11 95657039 - TCP11L1 chr11 33094020 + Exonic hg19 PRAD TCGA-ZG-A9L0 2 21 Out-of-frame Intra-chr q21 p13 Seq+ 43024 ChimerSeq STARFusion TCGA_RNA-Seq MTMR2-TCP11L1 MTMR2 chr11 95647406 - TCP11L1 chr11 33094020 + Exonic hg19 PRAD TCGA-ZG-A9L0 2 20 5'UTR-CDS Intra-chr q21 p13 Seq+ 43025 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-MLLT3 TMPRSS2 chr21 42851099 - MLLT3 chr9 20620833 - Exonic hg19 PRAD TCGA-ZG-A9L1 37 90 Out-of-frame Inter-chr q22.3 p21.3 Seq+ 43026 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-TIMM50 ACTN4 chr19 39138547 + TIMM50 chr19 39978701 + Exonic hg19 PRAD TCGA-ZG-A9L1 18 70 In-Frame Intra-chr q13.2 Seq+ 43027 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-TIMM50 ACTN4 chr19 39138547 + TIMM50 chr19 39976328 + Exonic hg19 PRAD TCGA-ZG-A9L1 5 70 In-Frame Intra-chr q13.2 Seq+ 43028 ChimerSeq STARFusion TCGA_RNA-Seq PERP-CASK PERP chr6 138428264 - CASK chrX 41646536 - Exonic hg19 PRAD TCGA-ZG-A9L1 10 9 In-Frame Inter-chr q23.3 p11.4 CAMK:CASK Seq+ 43029 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-PDE9A TMPRSS2 chr21 42866283 - PDE9A chr21 44163886 + Exonic hg19 PRAD TCGA-ZG-A9L2 23 56 In-Frame Intra-chr q22.3 q22.3 Seq+ 43030 ChimerSeq STARFusion TCGA_RNA-Seq PDE9A-TMPRSS2 PDE9A chr21 44153536 + TMPRSS2 chr21 42870116 - Exonic hg19 PRAD TCGA-ZG-A9L2 17 40 In-Frame Intra-chr q22.3 q22.3 Seq+ 43031 ChimerSeq STARFusion TCGA_RNA-Seq FAM210A-PSMG2 FAM210A chr18 13726328 - PSMG2 chr18 12712701 + Exonic hg19 PRAD TCGA-ZG-A9L2 9 20 5'UTR-CDS Intra-chr p11.21 p11.21 Seq+ 43032 ChimerSeq STARFusion TCGA_RNA-Seq PSMG2-SETMAR PSMG2 chr18 12706720 + SETMAR chr3 4354582 + Exonic hg19 PRAD TCGA-ZG-A9L2 6 25 Out-of-frame Inter-chr p11.21 p26.1 Seq+ 43033 ChimerSeq STARFusion TCGA_RNA-Seq IL6ST-DDX4 IL6ST chr5 55272043 - DDX4 chr5 55034778 + Exonic hg19 PRAD TCGA-ZG-A9L2 3 36 CDS-5'UTR Intra-chr q11.2 Oncogene q11.2 Seq+ 43034 ChimerSeq STARFusion TCGA_RNA-Seq IP6K1-HYAL3 IP6K1 chr3 49823787 - HYAL3 chr3 50330946 - Exonic hg19 PRAD TCGA-ZG-A9L2 3 24 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 43035 ChimerSeq STARFusion TCGA_RNA-Seq PSMG2-SETMAR PSMG2 chr18 12706720 + SETMAR chr3 4355351 + Exonic hg19 PRAD TCGA-ZG-A9L2 2 25 Out-of-frame Inter-chr p11.21 p26.1 Seq+ 43036 ChimerSeq STARFusion TCGA_RNA-Seq PSMG2-SETMAR PSMG2 chr18 12706720 + SETMAR chr3 4357896 + Exonic hg19 PRAD TCGA-ZG-A9L2 2 25 Out-of-frame Inter-chr p11.21 p26.1 Seq+ 43037 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A2-CCDC125 SLC45A2 chr5 33982341 - CCDC125 chr5 68581294 - Exonic hg19 PRAD TCGA-ZG-A9L4 7 13 In-Frame Intra-chr p13.2 Seq+ 43038 ChimerSeq STARFusion TCGA_RNA-Seq KLK2-ORMDL2 KLK2 chr19 51376775 + ORMDL2 chr12 56211804 + Exonic hg19 PRAD TCGA-ZG-A9L5 659 2577 5'UTR-5'UTR Inter-chr q13.33 q13.2 Seq+ 43039 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ETV5 TMPRSS2 chr21 42866283 - ETV5 chr3 185823731 - Exonic hg19 PRAD TCGA-ZG-A9L5 445 1530 CDS-5'UTR Inter-chr q22.3 q27.2 Oncogene Transcription factor KB Pub Seq+ 43040 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-DGKG TMPRSS2 chr21 42866283 - DGKG chr3 185823731 - Exonic hg19 PRAD TCGA-ZG-A9L5 445 1439 CDS-3'UTR Inter-chr q22.3 q27.3 Seq+ 43041 ChimerSeq STARFusion TCGA_RNA-Seq TRIM35-AMACR TRIM35 chr8 27168318 - AMACR chr5 33989607 - Exonic hg19 PRAD TCGA-ZG-A9L5 77 298 Out-of-frame Inter-chr p21.2 Tumor suppressor gene p13.2 Seq+ 43042 ChimerSeq STARFusion TCGA_RNA-Seq MYL6-TPM3P9 MYL6 chr12 56556115 + TPM3P9 chr19 53943081 + Exonic hg19 PRAD TCGA-ZG-A9L5 9 66 Out-of-frame Inter-chr q13.2 q13.42 Seq+ 43043 ChimerSeq STARFusion TCGA_RNA-Seq MYL6-TPM3P9 MYL6 chr12 56556115 + TPM3P9 chr19 53945049 + Exonic hg19 PRAD TCGA-ZG-A9L5 6 63 Out-of-frame Inter-chr q13.2 q13.42 Seq+ 43044 ChimerSeq STARFusion TCGA_RNA-Seq GTF2A2-MYO1E GTF2A2 chr15 59949605 - MYO1E chr15 59528871 - Exonic hg19 PRAD TCGA-ZG-A9L5 2 56 5'UTR-CDS Intra-chr q22.2 q22.2 Seq+ 43045 ChimerSeq STARFusion TCGA_RNA-Seq RANBP3-KLK2 RANBP3 chr19 5978072 - KLK2 chr19 51376439 + Exonic hg19 PRAD TCGA-ZG-A9L5 7 4 CDS-5'UTR Intra-chr p13.3 q13.33 Seq+ 43046 ChimerSeq STARFusion TCGA_RNA-Seq LAMP2-NKAP LAMP2 chrX 119602961 - NKAP chrX 119064128 - Exonic hg19 PRAD TCGA-ZG-A9L5 2 21 Out-of-frame Intra-chr q24 q24 Seq+ 43047 ChimerSeq STARFusion TCGA_RNA-Seq LAMP2-NKAP LAMP2 chrX 119602757 - NKAP chrX 119064128 - Exonic hg19 PRAD TCGA-ZG-A9L5 2 21 Out-of-frame Intra-chr q24 q24 Seq+ 43048 ChimerSeq STARFusion TCGA_RNA-Seq ZNF813-SARNP ZNF813 chr19 53990012 + SARNP chr12 56197512 - Exonic hg19 PRAD TCGA-ZG-A9L5 2 21 Out-of-frame Inter-chr q13.42 Transcription factor q13.2 43049 ChimerSeq STARFusion TCGA_RNA-Seq MROH1-PKMYT1 MROH1 chr8 145255444 + PKMYT1 chr16 3027032 - Exonic hg19 PRAD TCGA-ZG-A9L5 2 19 Out-of-frame Inter-chr q24.3 p13.3 Seq+ 43050 ChimerSeq STARFusion TCGA_RNA-Seq NBPF20-PDE4DIP NBPF20 chr1 148338367 - PDE4DIP chr1 144892589 - Exonic hg19 PRAD TCGA-ZG-A9L5 3 13 Out-of-frame Intra-chr q21.1 q21.2 Oncogene 43051 ChimerSeq STARFusion TCGA_RNA-Seq PMPCB-PRKAR2B PMPCB chr7 102952578 + PRKAR2B chr7 106762397 + Exonic hg19 PRAD TCGA-FC-7708 7 26 In-Frame Intra-chr q22.1 Seq+ 43052 ChimerSeq STARFusion TCGA_RNA-Seq GSK3B-COX17 GSK3B chr3 119562102 - COX17 chr3 119394080 - Exonic hg19 PRAD TCGA-FC-7708 2 11 Out-of-frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q13.33 Seq+ 43053 ChimerSeq STARFusion TCGA_RNA-Seq RNLS-ATAD1 RNLS chr10 90332660 - ATAD1 chr10 89536184 - Exonic hg19 PRAD TCGA-FC-7708 3 5 In-Frame Intra-chr q23.31 43054 ChimerSeq STARFusion TCGA_RNA-Seq LRP1-OS9 LRP1 chr12 57522814 + OS9 chr12 58088533 + Exonic hg19 PRAD TCGA-FC-7708 2 7 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 43055 ChimerSeq STARFusion TCGA_RNA-Seq MPDU1-GLP2R MPDU1 chr17 7487283 + GLP2R chr17 9737124 + Exonic hg19 PRAD TCGA-FC-7708 2 7 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 43056 ChimerSeq STARFusion TCGA_RNA-Seq KLK2-ETV1 KLK2 chr19 51376775 + ETV1 chr7 13971374 - Exonic hg19 PRAD TCGA-ZG-A9LY 734 3322 Out-of-frame Inter-chr q13.33 p21.2 Oncogene Transcription factor KB Seq+ 43057 ChimerSeq STARFusion TCGA_RNA-Seq KLK2-ETV1 KLK2 chr19 51378136 + ETV1 chr7 13971374 - Exonic hg19 PRAD TCGA-ZG-A9LY 162 3278 In-Frame Inter-chr q13.33 p21.2 Oncogene Transcription factor KB Seq+ 43058 ChimerSeq STARFusion TCGA_RNA-Seq ATF6-VCL ATF6 chr1 161736232 + VCL chr10 75854029 + Exonic hg19 PRAD TCGA-ZG-A9LY 16 20 Out-of-frame Inter-chr q23.3 Transcription factor q22.2 Seq+ 43059 ChimerSeq STARFusion TCGA_RNA-Seq CAB39L-FNDC3A CAB39L chr13 49975269 - FNDC3A chr13 49746179 + Exonic hg19 PRAD TCGA-ZG-A9LY 4 24 5'UTR-CDS Intra-chr q14.2 q14.2 Seq+ 43060 ChimerSeq STARFusion TCGA_RNA-Seq VCL-ATF6 VCL chr10 75855613 + ATF6 chr1 161748034 + Exonic hg19 PRAD TCGA-ZG-A9LY 5 5 Out-of-frame Inter-chr q22.2 q23.3 Transcription factor Seq+ 43061 ChimerSeq STARFusion TCGA_RNA-Seq ELK4-VCL ELK4 chr1 205592804 - VCL chr10 75855414 + Exonic hg19 PRAD TCGA-ZG-A9LY 4 7 Out-of-frame Inter-chr q32.1 Transcription factor q22.2 Seq+ 43062 ChimerSeq STARFusion TCGA_RNA-Seq HIST2H2BE-LINC00623 HIST2H2BE chr1 149857814 - LINC00623 chr1 144301536 - Exonic hg19 PRAD TCGA-ZG-A9LY 3 7 Out-of-frame Intra-chr q21.2 p11.2 43063 ChimerSeq STARFusion TCGA_RNA-Seq PTEN-LIPJ PTEN chr10 89712016 + LIPJ chr10 90362333 + Exonic hg19 PRAD TCGA-ZG-A9LZ 58 130 Out-of-frame Intra-chr q23.31 Oncogene Tumor suppressor gene q23.31 KB Seq+ 43064 ChimerSeq STARFusion TCGA_RNA-Seq SHQ1-PSMB7 SHQ1 chr3 72897348 - PSMB7 chr9 127167710 - Exonic hg19 PRAD TCGA-ZG-A9LZ 29 182 Out-of-frame Inter-chr p13 Tumor suppressor gene q33.3 Seq+ 43065 ChimerSeq STARFusion TCGA_RNA-Seq SHQ1-PSMB7 SHQ1 chr3 72897348 - PSMB7 chr9 127146934 - Exonic hg19 PRAD TCGA-ZG-A9LZ 26 177 Out-of-frame Inter-chr p13 Tumor suppressor gene q33.3 Seq+ 43066 ChimerSeq STARFusion TCGA_RNA-Seq CIR1-SCRN3 CIR1 chr2 175260279 - SCRN3 chr2 175264650 + Exonic hg19 PRAD TCGA-ZG-A9LZ 13 42 In-Frame Intra-chr q31.1 q31.1 Seq+ 43067 ChimerSeq STARFusion TCGA_RNA-Seq URI1-PEPD URI1 chr19 30462134 + PEPD chr19 33904549 - Exonic hg19 PRAD TCGA-ZG-A9LZ 3 28 In-Frame Intra-chr q12 q13.11 Seq+ 43068 ChimerSeq STARFusion TCGA_RNA-Seq PHF21A-ACSL6 PHF21A chr11 46098305 - ACSL6 chr5 131309093 - Exonic hg19 PRAD TCGA-ZG-A9LZ 5 9 In-Frame Inter-chr p11.2 Transcription factor q31.1 Seq+ 43069 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K10-ALDH16A1 MAP3K10 chr19 40698620 + ALDH16A1 chr19 49971638 + Exonic hg19 PRAD TCGA-ZG-A9LM 22 35 Out-of-frame Intra-chr q13.2 q13.33 Seq+ 43070 ChimerSeq STARFusion TCGA_RNA-Seq TMEFF2-TMPRSS11B TMEFF2 chr2 193044394 - TMPRSS11B chr4 69098134 - Exonic hg19 PRAD TCGA-ZG-A9LM 13 52 In-Frame Inter-chr q32.3 Tumor suppressor gene q13.2 Seq+ 43071 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K10-ALDH16A1 MAP3K10 chr19 40698620 + ALDH16A1 chr19 49972121 + Exonic hg19 PRAD TCGA-ZG-A9LM 8 35 Out-of-frame Intra-chr q13.2 q13.33 Seq+ 43072 ChimerSeq STARFusion TCGA_RNA-Seq TTI1-C3orf67 TTI1 chr20 36631030 - C3orf67 chr3 58870435 - Exonic hg19 PRAD TCGA-ZG-A9LM 5 5 Out-of-frame Inter-chr q11.23 p14.2 Seq+ 43073 ChimerSeq STARFusion TCGA_RNA-Seq EYA2-PI3 EYA2 chr20 45523626 + PI3 chr20 43803482 + Exonic hg19 PRAD TCGA-ZG-A9LN 16 15 5'UTR-5'UTR Intra-chr q13.12 q13.12 Seq+ 43074 ChimerSeq STARFusion TCGA_RNA-Seq EYA2-PI3 EYA2 chr20 45523626 + PI3 chr20 43804502 + Exonic hg19 PRAD TCGA-ZG-A9LN 3 15 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 43075 ChimerSeq STARFusion TCGA_RNA-Seq FAM66B-DEFB103A FAM66B chr8 7206605 - DEFB103A chr8 7739945 + Exonic hg19 PRAD TCGA-ZG-A9LN 3 8 3'UTR-CDS Intra-chr p23.1 43076 ChimerSeq STARFusion TCGA_RNA-Seq BCL2L12-FLT3LG BCL2L12 chr19 50173745 + FLT3LG chr19 49989272 + Exonic hg19 PRAD TCGA-ZG-A9LN 3 7 CDS-3'UTR Intra-chr q13.33 q13.33 Seq+ 43077 ChimerSeq STARFusion TCGA_RNA-Seq TCF7L2-VTI1A TCF7L2 chr10 114799885 + VTI1A chr10 114286846 + Exonic hg19 PRAD TCGA-ZG-A9LN 2 8 In-Frame Intra-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q25.2 Seq+ 43078 ChimerSeq STARFusion TCGA_RNA-Seq TVP23C-CLDN18 TVP23C chr17 15458596 - CLDN18 chr3 137742500 + Exonic hg19 PRAD TCGA-ZG-A9LN 3 4 Out-of-frame Inter-chr p12 q22.3 43079 ChimerSeq STARFusion TCGA_RNA-Seq EFTUD1-CACNA2D3 EFTUD1 chr15 82545032 - CACNA2D3 chr3 54786626 + Exonic hg19 PRAD TCGA-ZG-A9LN 2 5 Out-of-frame Inter-chr p21.1 Tumor suppressor gene 43080 ChimerSeq STARFusion TCGA_RNA-Seq PDE3B-EEF1G PDE3B chr11 14808231 + EEF1G chr11 62335000 - Exonic hg19 PRAD TCGA-ZG-A9LB 7 15 In-Frame Intra-chr p15.2 q12.3 43081 ChimerSeq STARFusion TCGA_RNA-Seq PDE3B-MIR3654 PDE3B chr11 14808231 + MIR3654 chr11 62335000 - Exonic hg19 PRAD TCGA-ZG-A9LB 7 15 CDS-5'UTR Intra-chr p15.2 q33 43082 ChimerSeq STARFusion TCGA_RNA-Seq MYRIP-MLH1 MYRIP chr3 39942417 + MLH1 chr3 37089010 + Exonic hg19 PRAD TCGA-KK-A5A1 14 77 Out-of-frame Intra-chr p22.1 p22.2 Oncogene Tumor suppressor gene Seq+ 43083 ChimerSeq STARFusion TCGA_RNA-Seq MYRIP-MLH1 MYRIP chr3 39942417 + MLH1 chr3 37090395 + Exonic hg19 PRAD TCGA-KK-A5A1 5 73 Out-of-frame Intra-chr p22.1 p22.2 Oncogene Tumor suppressor gene Seq+ 43084 ChimerSeq STARFusion TCGA_RNA-Seq RPL22-DNAJC11 RPL22 chr1 6257712 - DNAJC11 chr1 6714099 - Exonic hg19 PRAD TCGA-KK-A5A1 7 18 In-Frame Intra-chr p36.31 p36.31 Tumor suppressor gene Seq+ 43085 ChimerSeq STARFusion TCGA_RNA-Seq EYA2-SYS1 EYA2 chr20 45725807 + SYS1 chr20 43994259 + Exonic hg19 PRAD TCGA-KK-A5A1 4 14 In-Frame Intra-chr q13.12 q13.12 Seq+ 43086 ChimerSeq STARFusion TCGA_RNA-Seq MAGI1-SUCLG2 MAGI1 chr3 65607647 - SUCLG2 chr3 67579610 - Exonic hg19 PRAD TCGA-KK-A5A1 4 8 In-Frame Intra-chr Oncogene p14.1 Seq+ 43087 ChimerSeq STARFusion TCGA_RNA-Seq EPN2-SLC5A10 EPN2 chr17 19140844 + SLC5A10 chr17 18916723 + Exonic hg19 PRAD TCGA-KK-A5A1 4 4 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 43088 ChimerSeq STARFusion TCGA_RNA-Seq HSD17B4-LINC00992 HSD17B4 chr5 118872245 + LINC00992 chr5 116807597 + Exonic hg19 PRAD TCGA-KK-A5A1 2 9 Out-of-frame Intra-chr q23.1 q23.1 43089 ChimerSeq STARFusion TCGA_RNA-Seq ZFHX3-C16orf47 ZFHX3 chr16 73081651 - C16orf47 chr16 73177730 - Exonic hg19 PRAD TCGA-KK-A5A1 3 5 Out-of-frame Intra-chr q22.3 Tumor suppressor gene Transcription factor q22.3 Seq+ 43090 ChimerSeq STARFusion TCGA_RNA-Seq CPNE4-ACAD11 CPNE4 chr3 132002887 - ACAD11 chr3 132280061 - Exonic hg19 PRAD TCGA-KK-A5A1 2 5 5'UTR-CDS Intra-chr q22.1 q22.1 43091 ChimerSeq STARFusion TCGA_RNA-Seq CPNE4-NPHP3 CPNE4 chr3 132002887 - NPHP3 chr3 132280061 - Exonic hg19 PRAD TCGA-KK-A5A1 2 5 Out-of-frame Intra-chr q22.1 q22.1 43092 ChimerSeq STARFusion TCGA_RNA-Seq RELN-ORC5 RELN chr7 103270387 - ORC5 chr7 103767340 - Exonic hg19 PRAD TCGA-KK-A5A1 2 5 In-Frame Intra-chr q22.1 q22.2 Seq+ 43093 ChimerSeq STARFusion TCGA_RNA-Seq PTPN23-ICA1L PTPN23 chr3 47422670 + ICA1L chr2 203661687 - Exonic hg19 PRAD TCGA-HC-7078 8 21 Out-of-frame Inter-chr p21.31 Tumor suppressor gene q33.2 Seq+ 43094 ChimerSeq STARFusion TCGA_RNA-Seq PTPN23-ICA1L PTPN23 chr3 47422670 + ICA1L chr2 203653810 - Exonic hg19 PRAD TCGA-HC-7078 4 21 Out-of-frame Inter-chr p21.31 Tumor suppressor gene q33.2 Seq+ 43095 ChimerSeq STARFusion TCGA_RNA-Seq TRIM13-TPTE2P3 TRIM13 chr13 50571899 + TPTE2P3 chr13 53145367 + Exonic hg19 PRAD TCGA-HC-7078 3 20 5'UTR-5'UTR Intra-chr q14.2 Tumor suppressor gene q14.3 43096 ChimerSeq STARFusion TCGA_RNA-Seq RGPD5-TMEM18 RGPD5 chr2 110552114 + TMEM18 chr2 675630 - Exonic hg19 PRAD TCGA-HC-7078 3 17 In-Frame Intra-chr q13 p25.3 Seq+ 43097 ChimerSeq STARFusion TCGA_RNA-Seq TRIM13-TPTE2P3 TRIM13 chr13 50571899 + TPTE2P3 chr13 53126588 + Exonic hg19 PRAD TCGA-HC-7078 2 10 5'UTR-5'UTR Intra-chr q14.2 Tumor suppressor gene q14.3 43098 ChimerSeq STARFusion TCGA_RNA-Seq HSPG2-IGHG2 HSPG2 chr1 22176639 - IGHG2 chr14 106111126 - Exonic hg19 PRAD TCGA-HC-7079 36 1 Out-of-frame Inter-chr p36.12 43099 ChimerSeq STARFusion TCGA_RNA-Seq HSPG2-IGHG2 HSPG2 chr1 22176639 - IGHG2 chr14 106136181 - Exonic hg19 PRAD TCGA-HC-7079 34 1 Out-of-frame Inter-chr p36.12 43100 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-IGHG2 DHRSX chrY 2134828 - IGHG2 chr14 106111127 - Exonic hg19 PRAD TCGA-HC-7079 29 1 Out-of-frame Inter-chr p22.33 43101 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-IGHG2 DHRSX chrY 2134825 - IGHG2 chr14 106209405 - Exonic hg19 PRAD TCGA-HC-7079 22 1 Out-of-frame Inter-chr p22.33 43102 ChimerSeq STARFusion TCGA_RNA-Seq HSPG2-IGHG2 HSPG2 chr1 22176639 - IGHG2 chr14 106209407 - Exonic hg19 PRAD TCGA-HC-7079 10 1 Out-of-frame Inter-chr p36.12 43103 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880008 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-HC-7077 421 1314 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 43104 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42870046 - ETV4 chr17 41623036 - Exonic hg19 PRAD TCGA-HC-7077 78 1261 CDS-5'UTR Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 43105 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42870046 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-HC-7077 59 1261 In-Frame Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 43106 ChimerSeq STARFusion TCGA_RNA-Seq ZNF10-SPATA17 ZNF10 chr12 133707600 + SPATA17 chr1 218036116 + Exonic hg19 PRAD TCGA-HC-7077 11 139 5'UTR-CDS Inter-chr q24.33 Transcription factor q41 Seq+ 43107 ChimerSeq STARFusion TCGA_RNA-Seq ZNF10-SPATA17 ZNF10 chr12 133707340 + SPATA17 chr1 218036116 + Exonic hg19 PRAD TCGA-HC-7077 7 137 5'UTR-CDS Inter-chr q24.33 Transcription factor q41 Seq+ 43108 ChimerSeq STARFusion TCGA_RNA-Seq CHD8-AP1S1 CHD8 chr14 21878010 - AP1S1 chr7 100803800 + Exonic hg19 PRAD TCGA-HC-7077 13 78 In-Frame Inter-chr q11.2 q22.1 Seq+ 43109 ChimerSeq STARFusion TCGA_RNA-Seq POLR2J2-DAD1 POLR2J2 chr7 102311999 - DAD1 chr14 23044133 - Exonic hg19 PRAD TCGA-HC-7077 12 55 Out-of-frame Inter-chr q22.1 q11.2 Seq+ 43110 ChimerSeq STARFusion TCGA_RNA-Seq EP300-NXPE2 EP300 chr22 41546202 + NXPE2 chr11 114568767 + Exonic hg19 PRAD TCGA-HC-7077 9 27 Out-of-frame Inter-chr q13.2 Oncogene q23.3 Seq+ 43111 ChimerSeq STARFusion TCGA_RNA-Seq ZNF268-SPATA17 ZNF268 chr12 133707600 + SPATA17 chr1 218036116 + Exonic hg19 PRAD TCGA-HC-7077 11 18 5'UTR-CDS Inter-chr q24.33 Transcription factor q41 43112 ChimerSeq STARFusion TCGA_RNA-Seq LINC00993-TACC1P1 LINC00993 chr10 37635757 + TACC1P1 chr10 37811939 + Exonic hg19 PRAD TCGA-HC-7077 7 16 Out-of-frame Intra-chr p11.21 p11.21 43113 ChimerSeq STARFusion TCGA_RNA-Seq POLR2J2-DAD1 POLR2J2 chr7 102311999 - DAD1 chr14 23044133 - Exonic hg19 PRAD TCGA-HC-7077 3 23 Out-of-frame Inter-chr q22.1 q11.2 Seq+ 43114 ChimerSeq STARFusion TCGA_RNA-Seq ATP8A2P1-TACC1P1 ATP8A2P1 chr10 37635757 + TACC1P1 chr10 37811939 + Exonic hg19 PRAD TCGA-HC-7077 3 8 Out-of-frame Intra-chr p11.21 p11.21 43115 ChimerSeq STARFusion TCGA_RNA-Seq RRBP1-VDAC3 RRBP1 chr20 17610468 - VDAC3 chr8 42257169 + Exonic hg19 PRAD TCGA-HC-7077 2 9 Out-of-frame Inter-chr p12.1 p11.21 Seq+ 43116 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649522 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-HC-A8CY 242 915 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 43117 ChimerSeq STARFusion TCGA_RNA-Seq RAI1-PEX1 RAI1 chr17 17714169 + PEX1 chr7 92148232 - Exonic hg19 PRAD TCGA-HC-A8CY 3 35 Out-of-frame Inter-chr p11.2 q21.2 Seq+ 43118 ChimerSeq STARFusion TCGA_RNA-Seq BANP-SF3A3 BANP chr16 88061256 + SF3A3 chr1 38450451 - Exonic hg19 PRAD TCGA-HC-A8CY 5 11 Out-of-frame Inter-chr q24.2 Tumor suppressor gene p34.3 Seq+ 43119 ChimerSeq STARFusion TCGA_RNA-Seq IRF2-ENPP6 IRF2 chr4 185395533 - ENPP6 chr4 185045425 - Exonic hg19 PRAD TCGA-CH-5764 5 12 5'UTR-CDS Intra-chr q35.1 Transcription factor q35.1 Seq+ 43120 ChimerSeq STARFusion TCGA_RNA-Seq ABCD3-DPYD ABCD3 chr1 94956803 + DPYD chr1 97981497 - Exonic hg19 PRAD TCGA-CH-5764 3 19 In-Frame Intra-chr p21.3 p21.3 Oncogene Seq+ 43121 ChimerSeq STARFusion TCGA_RNA-Seq KDELR1-THOC3 KDELR1 chr19 48892810 - THOC3 chr5 175461730 - Exonic hg19 PRAD TCGA-CH-5765 3 16 CDS-5'UTR Inter-chr q13.33 q35.2 43122 ChimerSeq STARFusion TCGA_RNA-Seq SLC30A4-PDE2A SLC30A4 chr15 45803336 - PDE2A chr11 72342183 - Exonic hg19 PRAD TCGA-CH-5765 4 10 In-Frame Inter-chr q21.1 q13.4 Seq+ 43123 ChimerSeq STARFusion TCGA_RNA-Seq LRRCC1-ZC2HC1A LRRCC1 chr8 86025334 + ZC2HC1A chr8 79627456 + Exonic hg19 PRAD TCGA-CH-5765 3 9 Out-of-frame Intra-chr q21.2 q21.13 Seq+ 43124 ChimerSeq STARFusion TCGA_RNA-Seq KDELR1-THOC3 KDELR1 chr19 48892810 - THOC3 chr5 175394270 - Exonic hg19 PRAD TCGA-CH-5765 2 9 In-Frame Inter-chr q13.33 q35.2 43125 ChimerSeq STARFusion TCGA_RNA-Seq PPAP2A-CDC20B PPAP2A chr5 54737679 - CDC20B chr5 54442684 - Exonic hg19 PRAD TCGA-CH-5766 347 1834 In-Frame Intra-chr q11.2 Seq+ 43126 ChimerSeq STARFusion TCGA_RNA-Seq PTEN-RALGAPA2 PTEN chr10 89653866 + RALGAPA2 chr20 20624193 - Exonic hg19 PRAD TCGA-CH-5766 9 45 Out-of-frame Inter-chr q23.31 Oncogene Tumor suppressor gene p11.23 Seq+ 43127 ChimerSeq STARFusion TCGA_RNA-Seq CAMK2G-NDUFA13 CAMK2G chr10 75574761 - NDUFA13 chr19 19636991 + Exonic hg19 PRAD TCGA-CH-5766 4 27 3'UTR-CDS Inter-chr q22.2 p13.11 Seq+ 43128 ChimerSeq STARFusion TCGA_RNA-Seq CAMK2G-YJEFN3 CAMK2G chr10 75574761 - YJEFN3 chr19 19636991 + Exonic hg19 PRAD TCGA-CH-5766 4 27 3'UTR-5'UTR Inter-chr q22.2 p13.11 43129 ChimerSeq STARFusion TCGA_RNA-Seq TRPM8-UGT1A6 TRPM8 chr2 234894509 + UGT1A6 chr2 234663336 + Exonic hg19 PRAD TCGA-CH-5766 3 21 Out-of-frame Intra-chr q37.1 q37.1 Seq+ 43130 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2B-NENF GATAD2B chr1 153895209 - NENF chr1 212615907 + Exonic hg19 PRAD TCGA-CH-5766 3 13 5'UTR-CDS Intra-chr Transcription factor q32.3 Seq+ 43131 ChimerSeq STARFusion TCGA_RNA-Seq AZIN1-ZFPM2 AZIN1 chr8 103870241 - ZFPM2 chr8 106456508 + Exonic hg19 PRAD TCGA-CH-5767 12 62 5'UTR-CDS Intra-chr q22.3 q22.3 Transcription factor Seq+ 43132 ChimerSeq STARFusion TCGA_RNA-Seq AZIN1-ZFPM2 AZIN1 chr8 103862227 - ZFPM2 chr8 106456508 + Exonic hg19 PRAD TCGA-CH-5767 5 61 5'UTR-CDS Intra-chr q22.3 q22.3 Transcription factor Seq+ 43133 ChimerSeq STARFusion TCGA_RNA-Seq PMEPA1-ETV4 PMEPA1 chr20 56284530 - ETV4 chr17 41613847 - Exonic hg19 PRAD TCGA-CH-5762 112 811 In-Frame Inter-chr q13.31 q21.31 Oncogene Transcription factor Seq+ 43134 ChimerSeq STARFusion TCGA_RNA-Seq PMEPA1-ETV4 PMEPA1 chr20 56286380 - ETV4 chr17 41613847 - Exonic hg19 PRAD TCGA-CH-5762 22 809 5'UTR-CDS Inter-chr q13.31 q21.31 Oncogene Transcription factor Seq+ 43135 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880008 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-CH-5763 36 9 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 43136 ChimerSeq STARFusion TCGA_RNA-Seq AFF1-PAQR3 AFF1 chr4 88016121 + PAQR3 chr4 79808463 - Exonic hg19 PRAD TCGA-CH-5763 2 10 CDS-3'UTR Intra-chr q21.3 Oncogene q21.21 Seq+ 43137 ChimerSeq STARFusion TCGA_RNA-Seq UTRN-EIF4G3 UTRN chr6 145110415 + EIF4G3 chr1 21139732 - Exonic hg19 PRAD TCGA-CH-5763 2 5 Out-of-frame Inter-chr q24.2 p36.12 Seq+ 43138 ChimerSeq STARFusion TCGA_RNA-Seq AFF3-IL1B AFF3 chr2 100343539 - IL1B chr2 113594435 - Exonic hg19 PRAD TCGA-XJ-A9DI 8 37 CDS-5'UTR Intra-chr q11.2 Oncogene q14.1 Seq+ 43139 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-C7orf72 TBL1XR1 chr3 176914909 - C7orf72 chr7 50143910 + Exonic hg19 PRAD TCGA-XJ-A9DK 7 2 5'UTR-CDS Inter-chr q26.32 p12.2 Seq+ 43140 ChimerSeq STARFusion TCGA_RNA-Seq PPAP2A-SKIV2L2 PPAP2A chr5 54763697 - SKIV2L2 chr5 54718706 + Exonic hg19 PRAD TCGA-XJ-A9DK 4 12 Out-of-frame Intra-chr q11.2 43141 ChimerSeq STARFusion TCGA_RNA-Seq UBTF-LINC00854 UBTF chr17 42293897 - LINC00854 chr17 41375637 - Exonic hg19 PRAD TCGA-XJ-A9DK 3 8 Out-of-frame Intra-chr q21.31 q21.31 43142 ChimerSeq STARFusion TCGA_RNA-Seq SLC30A4-HMOX2 SLC30A4 chr15 45803336 - HMOX2 chr16 4555485 + Exonic hg19 PRAD TCGA-CH-5768 2 3 CDS-5'UTR Inter-chr q21.1 p13.3 43143 ChimerSeq STARFusion TCGA_RNA-Seq RBM19-LHX5 RBM19 chr12 114352774 - LHX5 chr12 113907150 - Exonic hg19 PRAD TCGA-CH-5769 3 22 In-Frame Intra-chr q24.21 q24.13 Transcription factor 43144 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649522 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-XJ-A9DQ 8 91 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 43145 ChimerSeq STARFusion TCGA_RNA-Seq MOV10-ZNHIT6 MOV10 chr1 113217671 + ZNHIT6 chr1 86146587 - Exonic hg19 PRAD TCGA-XJ-A9DQ 5 13 In-Frame Intra-chr p13.2 p22.3 Seq+ 43146 ChimerSeq STARFusion TCGA_RNA-Seq COA1-AMPH COA1 chr7 43769028 - AMPH chr7 38574611 - Exonic hg19 PRAD TCGA-TP-A8TV 10 36 Out-of-frame Intra-chr p13 p14.1 Seq+ 43147 ChimerSeq STARFusion TCGA_RNA-Seq PPM1B-MTA3 PPM1B chr2 44396413 + MTA3 chr2 42980514 + Exonic hg19 PRAD TCGA-TP-A8TV 5 8 5'UTR-3'UTR Intra-chr p21 p21 Seq+ 43148 ChimerSeq STARFusion TCGA_RNA-Seq ABHD17B-CCL25 ABHD17B chr9 74525550 - CCL25 chr19 8117648 + Exonic hg19 PRAD TCGA-XJ-A9DX 10 61 Out-of-frame Inter-chr q21.13 p13.2 Seq+ 43149 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D23-TMEM45A TBC1D23 chr3 99998604 + TMEM45A chr3 100287666 + Exonic hg19 PRAD TCGA-XJ-A9DX 16 23 In-Frame Intra-chr q12.1 q12.2 Seq+ 43150 ChimerSeq STARFusion TCGA_RNA-Seq FZR1-CELF5 FZR1 chr19 3506472 + CELF5 chr19 3293317 + Exonic hg19 PRAD TCGA-XJ-A9DX 10 22 5'UTR-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 43151 ChimerSeq STARFusion TCGA_RNA-Seq REPS2-TXLNG REPS2 chrX 17152030 + TXLNG chrX 16852406 + Exonic hg19 PRAD TCGA-XJ-A9DX 9 25 In-Frame Intra-chr p22.2 p22.2 Seq+ 43152 ChimerSeq STARFusion TCGA_RNA-Seq PPM1H-WIF1 PPM1H chr12 63131282 - WIF1 chr12 65462684 - Exonic hg19 PRAD TCGA-XJ-A9DX 8 27 Out-of-frame Intra-chr q14.2 q14.3 Tumor suppressor gene Seq+ 43153 ChimerSeq STARFusion TCGA_RNA-Seq DYM-ACAA2 DYM chr18 46986768 - ACAA2 chr18 47329223 - Exonic hg19 PRAD TCGA-XJ-A9DX 5 15 5'UTR-CDS Intra-chr q21.1 q21.1 Seq+ 43154 ChimerSeq STARFusion TCGA_RNA-Seq ATP11B-HECW1 ATP11B chr3 182559910 + HECW1 chr7 43546736 + Exonic hg19 PRAD TCGA-XJ-A9DX 6 10 Out-of-frame Inter-chr q26.33 Oncogene p14.1 Seq+ 43155 ChimerSeq STARFusion TCGA_RNA-Seq KIF13A-TPMT KIF13A chr6 17987285 - TPMT chr6 18149402 - Exonic hg19 PRAD TCGA-XJ-A9DX 5 12 CDS-5'UTR Intra-chr p22.3 p22.3 Seq+ 43156 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD36C-FAM178B ANKRD36C chr2 96614278 - FAM178B chr2 97559788 - Exonic hg19 PRAD TCGA-XJ-A9DX 2 13 Out-of-frame Intra-chr q11.1 q11.2 43157 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1199-KATNAL2 KIAA1199 chr15 81201647 + KATNAL2 chr18 44572828 + Exonic hg19 PRAD TCGA-XJ-A9DX 4 5 CDS-5'UTR Inter-chr q21.1 Seq+ 43158 ChimerSeq STARFusion TCGA_RNA-Seq CASP7-LRRC27 CASP7 chr10 115439737 + LRRC27 chr10 134165111 + Exonic hg19 PRAD TCGA-TP-A8TT 20 36 5'UTR-5'UTR Intra-chr q25.3 q26.3 Seq+ 43159 ChimerSeq STARFusion TCGA_RNA-Seq CASP7-LRRC27 CASP7 chr10 115439108 + LRRC27 chr10 134165111 + Exonic hg19 PRAD TCGA-TP-A8TT 7 36 5'UTR-5'UTR Intra-chr q25.3 q26.3 Seq+ 43160 ChimerSeq STARFusion TCGA_RNA-Seq CCSER1-WDFY3 CCSER1 chr4 91048982 + WDFY3 chr4 85696291 - Exonic hg19 PRAD TCGA-TP-A8TT 3 8 Out-of-frame Intra-chr q22.1 q21.23 Seq+ 43161 ChimerSeq STARFusion TCGA_RNA-Seq LRP1-OS9 LRP1 chr12 57552421 + OS9 chr12 58114189 + Exonic hg19 PRAD TCGA-H9-A6BY 73 383 In-Frame Intra-chr q13.3 q13.3 Seq+ 43162 ChimerSeq STARFusion TCGA_RNA-Seq LRP1-OS9 LRP1 chr12 57552421 + OS9 chr12 58113882 + Exonic hg19 PRAD TCGA-H9-A6BY 43 381 In-Frame Intra-chr q13.3 q13.3 Seq+ 43163 ChimerSeq STARFusion TCGA_RNA-Seq SORD-ADPGK SORD chr15 45315547 + ADPGK chr15 73078187 - Exonic hg19 PRAD TCGA-HC-8216 5 19 5'UTR-5'UTR Intra-chr q21.1 q24.1 Seq+ 43164 ChimerSeq STARFusion TCGA_RNA-Seq SORD-ADPGK SORD chr15 45315547 + ADPGK chr15 73067438 - Exonic hg19 PRAD TCGA-HC-8216 4 19 Out-of-frame Intra-chr q21.1 q24.1 Seq+ 43165 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-TMEM109 TMPRSS2 chr21 42860321 - TMEM109 chr11 60687158 + Exonic hg19 PRAD TCGA-HC-8216 4 11 CDS-5'UTR Inter-chr q22.3 q12.2 Seq+ 43166 ChimerSeq STARFusion TCGA_RNA-Seq KIF18B-TUBG1 KIF18B chr17 43024996 - TUBG1 chr17 40764093 + Exonic hg19 PRAD TCGA-HC-8216 3 14 5'UTR-CDS Intra-chr q21.31 q21.2 Seq+ 43167 ChimerSeq STARFusion TCGA_RNA-Seq SMURF2-DEDD2 SMURF2 chr17 62657947 - DEDD2 chr19 42719404 - Exonic hg19 PRAD TCGA-HC-8216 5 5 In-Frame Inter-chr q24.1 q13.2 Seq+ 43168 ChimerSeq STARFusion TCGA_RNA-Seq MITF-ARL6IP5 MITF chr3 69788852 + ARL6IP5 chr3 69150990 + Exonic hg19 PRAD TCGA-HC-8216 3 8 In-Frame Intra-chr p13 Oncogene Transcription factor p14.1 Tumor suppressor gene Seq+ 43169 ChimerSeq STARFusion TCGA_RNA-Seq JMJD1C-YWHAZ JMJD1C chr10 64960236 - YWHAZ chr8 101937267 - Exonic hg19 PRAD TCGA-HC-8216 2 10 Out-of-frame Inter-chr q21.3 q22.3 Seq+ 43170 ChimerSeq STARFusion TCGA_RNA-Seq VAV2-COL27A1 VAV2 chr9 136804225 - COL27A1 chr9 117047004 + Exonic hg19 PRAD TCGA-XQ-A8TA 89 251 In-Frame Intra-chr q34.2 q32 Seq+ 43171 ChimerSeq STARFusion TCGA_RNA-Seq CDC14B-AUH CDC14B chr9 99381501 - AUH chr9 94060358 - Exonic hg19 PRAD TCGA-XQ-A8TA 24 72 In-Frame Intra-chr q22.33 q22.31 Seq+ 43172 ChimerSeq STARFusion TCGA_RNA-Seq RGS3-ABCA1 RGS3 chr9 116226161 + ABCA1 chr9 107602800 - Exonic hg19 PRAD TCGA-XQ-A8TA 20 47 Out-of-frame Intra-chr q32 q31.1 Seq+ 43173 ChimerSeq STARFusion TCGA_RNA-Seq PTPRG-FHIT PTPRG chr3 61734656 + FHIT chr3 60522712 - Exonic hg19 PRAD TCGA-XQ-A8TA 17 55 CDS-5'UTR Intra-chr p14.2 p14.2 Tumor suppressor gene Seq+ 43174 ChimerSeq STARFusion TCGA_RNA-Seq TMEM8A-YBX3 TMEM8A chr16 431701 - YBX3 chr12 10856747 - Exonic hg19 PRAD TCGA-XQ-A8TA 9 30 Out-of-frame Inter-chr p13.3 p13.2 Transcription factor Seq+ 43175 ChimerSeq STARFusion TCGA_RNA-Seq RAD23B-HSPA5 RAD23B chr9 110045976 + HSPA5 chr9 128004652 - Exonic hg19 PRAD TCGA-XQ-A8TA 8 23 CDS-5'UTR Intra-chr q31.2 Tumor suppressor gene q33.3 43176 ChimerSeq STARFusion TCGA_RNA-Seq YBX3-TMEM8A YBX3 chr12 10862507 - TMEM8A chr16 427848 - Exonic hg19 PRAD TCGA-XQ-A8TA 5 28 Out-of-frame Inter-chr p13.2 Transcription factor p13.3 Seq+ 43177 ChimerSeq STARFusion TCGA_RNA-Seq STX17-DAB2IP STX17 chr9 102668988 + DAB2IP chr9 124519292 + Exonic hg19 PRAD TCGA-XQ-A8TA 11 3 5'UTR-5'UTR Intra-chr q31.1 q33.2 Tumor suppressor gene Seq+ 43178 ChimerSeq STARFusion TCGA_RNA-Seq TMEM8A-YBX3 TMEM8A chr16 434256 - YBX3 chr12 10856747 - Exonic hg19 PRAD TCGA-XQ-A8TA 2 27 Out-of-frame Inter-chr p13.3 p13.2 Transcription factor Seq+ 43179 ChimerSeq STARFusion TCGA_RNA-Seq YBX3-TMEM8A YBX3 chr12 10865810 - TMEM8A chr16 427585 - Exonic hg19 PRAD TCGA-XQ-A8TA 2 27 Out-of-frame Inter-chr p13.2 Transcription factor p13.3 Seq+ 43180 ChimerSeq STARFusion TCGA_RNA-Seq SNX30-ALDOB SNX30 chr9 115642874 + ALDOB chr9 104184186 - Exonic hg19 PRAD TCGA-XQ-A8TA 4 16 3'UTR-CDS Intra-chr q32 q31.1 Seq+ 43181 ChimerSeq STARFusion TCGA_RNA-Seq EZH1-IGFBP5 EZH1 chr17 40879653 - IGFBP5 chr2 217543802 - Exonic hg19 PRAD TCGA-XQ-A8TA 4 14 Out-of-frame Inter-chr q21.2 Tumor suppressor gene q35 Tumor suppressor gene Seq+ 43182 ChimerSeq STARFusion TCGA_RNA-Seq ANAPC7-PAH ANAPC7 chr12 110841332 - PAH chr12 103271328 - Exonic hg19 PRAD TCGA-XQ-A8TA 4 10 Out-of-frame Intra-chr q24.11 q23.2 Seq+ 43183 ChimerSeq STARFusion TCGA_RNA-Seq FANCC-ROR2 FANCC chr9 98002931 - ROR2 chr9 94538100 - Exonic hg19 PRAD TCGA-XQ-A8TA 3 13 Out-of-frame Intra-chr q22.32 Oncogene q22.31 TK:Ror Tumor suppressor gene Seq+ 43184 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD22-LRRTM3 ANKRD22 chr10 90611344 - LRRTM3 chr10 68857345 + Exonic hg19 PRAD TCGA-XQ-A8TB 10 23 In-Frame Intra-chr q23.31 q21.3 Seq+ 43185 ChimerSeq STARFusion TCGA_RNA-Seq ADRBK2-IGLL3P ADRBK2 chr22 26000420 + IGLL3P chr22 25714224 + Exonic hg19 PRAD TCGA-XQ-A8TB 8 30 CDS-5'UTR Intra-chr q11.23 43186 ChimerSeq STARFusion TCGA_RNA-Seq ERG-ABCC4 ERG chr21 39947586 - ABCC4 chr13 95900007 - Exonic hg19 PRAD TCGA-XQ-A8TB 3 15 Out-of-frame Inter-chr q22.2 Oncogene Transcription factor q32.1 Seq+ 43187 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KLK2 EGFR chr7 55242541 + KLK2 chr19 51381663 + Exonic hg19 PRAD TCGA-G9-6384 3 4 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q13.33 43188 ChimerSeq STARFusion TCGA_RNA-Seq ACACA-MMP28 ACACA chr17 35454765 - MMP28 chr17 34106327 - Exonic hg19 PRAD TCGA-V1-A8ML 14 23 In-Frame Intra-chr q12 Seq+ 43189 ChimerSeq STARFusion TCGA_RNA-Seq PTRF-AGAP7 PTRF chr17 40574645 - AGAP7 chr10 51483242 - Exonic hg19 PRAD TCGA-V1-A8ML 2 9 Out-of-frame Inter-chr 43190 ChimerSeq STARFusion TCGA_RNA-Seq PPAP2A-SMN1 PPAP2A chr5 54830400 - SMN1 chr5 70248266 + Exonic hg19 PRAD TCGA-V1-A8MJ 29 82 CDS-3'UTR Intra-chr Seq+ 43191 ChimerSeq STARFusion TCGA_RNA-Seq PPAP2A-SMN1 PPAP2A chr5 54830400 - SMN1 chr5 70247768 + Exonic hg19 PRAD TCGA-V1-A8MJ 16 82 Out-of-frame Intra-chr Seq+ 43192 ChimerSeq STARFusion TCGA_RNA-Seq MAP4K3-SRGAP2 MAP4K3 chr2 39664033 - SRGAP2 chr1 206557369 + Exonic hg19 PRAD TCGA-V1-A8MJ 2 8 In-Frame Inter-chr p22.1 q32.1 Tumor suppressor gene Seq+ 43193 ChimerSeq STARFusion TCGA_RNA-Seq AGBL4-FAF1 AGBL4 chr1 49511256 - FAF1 chr1 50907195 - Exonic hg19 PRAD TCGA-V1-A8MF 3 8 In-Frame Intra-chr p33 p32.3 Seq+ 43194 ChimerSeq STARFusion TCGA_RNA-Seq SLCO5A1-CASC9 SLCO5A1 chr8 70650275 - CASC9 chr8 76136593 - Exonic hg19 PRAD TCGA-V1-A8MF 3 8 Out-of-frame Intra-chr q13.3 q21.13 Seq+ 43195 ChimerSeq STARFusion TCGA_RNA-Seq DDX39B-PPP1R18 DDX39B chr6 31506540 - PPP1R18 chr6 30647166 - Exonic hg19 PRAD TCGA-V1-A8MG 11 36 In-Frame Intra-chr p21.33 Seq+ 43196 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-STK38 KCTD20 chr6 36438034 + STK38 chr6 36493419 - Exonic hg19 PRAD TCGA-V1-A8MG 4 8 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 43197 ChimerSeq STARFusion TCGA_RNA-Seq HMGN2P46-AGAP1 HMGN2P46 chr15 45808090 + AGAP1 chr2 236658998 + Exonic hg19 PRAD TCGA-G9-6379 2 4 5'UTR-CDS Inter-chr q21.1 q37.2 Seq+ 43198 ChimerSeq STARFusion TCGA_RNA-Seq TSEN2-KLK2 TSEN2 chr3 12533716 + KLK2 chr19 51379728 + Exonic hg19 PRAD TCGA-G9-6378 10 39 Out-of-frame Inter-chr p25.2 q13.33 Seq+ 43199 ChimerSeq STARFusion TCGA_RNA-Seq TSEN2-KLK2 TSEN2 chr3 12533716 + KLK2 chr19 51377977 + Exonic hg19 PRAD TCGA-G9-6378 4 36 In-Frame Inter-chr p25.2 q13.33 Seq+ 43200 ChimerSeq STARFusion TCGA_RNA-Seq UQCC1-MRPS35 UQCC1 chr20 33902491 - MRPS35 chr12 27888380 + Exonic hg19 PRAD TCGA-G9-6377 5 14 Out-of-frame Inter-chr q11.22 p11.22 Seq+ 43201 ChimerSeq STARFusion TCGA_RNA-Seq NFKB1-LHFPL3 NFKB1 chr4 103446714 + LHFPL3 chr7 104546634 + Exonic hg19 PRAD TCGA-G9-6377 3 6 Out-of-frame Inter-chr q24 Oncogene Tumor suppressor gene Transcription factor q22.2 Seq+ 43202 ChimerSeq STARFusion TCGA_RNA-Seq CYB561D1-CYMP CYB561D1 chr1 110036909 + CYMP chr1 111025397 + Exonic hg19 PRAD TCGA-G9-6373 2 10 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 43203 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF2-C4orf45 RAPGEF2 chr4 160268150 + C4orf45 chr4 159814869 - Exonic hg19 PRAD TCGA-G9-6373 2 6 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 43204 ChimerSeq STARFusion TCGA_RNA-Seq CRISPLD2-LINC00633 CRISPLD2 chr16 84922969 + LINC00633 chrX 134253236 - Exonic hg19 PRAD TCGA-2A-AAYU 6 28 Out-of-frame Inter-chr q24.1 q26.3 43205 ChimerSeq STARFusion TCGA_RNA-Seq VDAC2-NEO1 VDAC2 chr10 76970947 + NEO1 chr15 73408881 + Exonic hg19 PRAD TCGA-2A-AAYU 4 27 In-Frame Inter-chr q22.2 q24.1 Seq+ 43206 ChimerSeq STARFusion TCGA_RNA-Seq CRISPLD2-LINC00633 CRISPLD2 chr16 84922969 + LINC00633 chrX 134255841 - Exonic hg19 PRAD TCGA-2A-AAYU 3 28 Out-of-frame Inter-chr q24.1 q26.3 43207 ChimerSeq STARFusion TCGA_RNA-Seq EP400NL-ATF7IP EP400NL chr12 132575488 + ATF7IP chr12 14649165 + Exonic hg19 PRAD TCGA-2A-AAYU 3 13 5'UTR-CDS Intra-chr q24.33 p13.1 Seq+ 43208 ChimerSeq STARFusion TCGA_RNA-Seq PGM1-SLC16A12 PGM1 chr1 64059405 + SLC16A12 chr10 91222381 - Exonic hg19 PRAD TCGA-2A-AAYU 2 5 CDS-5'UTR Inter-chr p31.3 q23.31 Seq+ 43209 ChimerSeq STARFusion TCGA_RNA-Seq RALGPS2-FDPS RALGPS2 chr1 178710744 + FDPS chr1 155287732 + Exonic hg19 PRAD TCGA-G9-6499 11 115 5'UTR-5'UTR Intra-chr q25.2 q22 43210 ChimerSeq STARFusion TCGA_RNA-Seq C1orf132-UCK2 C1orf132 chr1 208041271 - UCK2 chr1 165859441 + Exonic hg19 PRAD TCGA-G9-6499 17 45 Out-of-frame Intra-chr q32.2 q24.1 43211 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB41-CD46P1 ZBTB41 chr1 197157422 - CD46P1 chr1 207825892 + Exonic hg19 PRAD TCGA-G9-6499 11 65 Out-of-frame Intra-chr q31.3 Transcription factor q32.2 43212 ChimerSeq STARFusion TCGA_RNA-Seq PDE4D-NLK PDE4D chr5 59284315 - NLK chr17 26449629 + Exonic hg19 PRAD TCGA-G9-6499 2 9 In-Frame Inter-chr q12.1 q11.2 CMGC:MAPK 43213 ChimerSeq STARFusion TCGA_RNA-Seq RNF144B-PPP3CA RNF144B chr6 18399930 + PPP3CA chr4 102117273 - Exonic hg19 PRAD TCGA-HC-7209 222 751 Out-of-frame Inter-chr p22.3 q24 Seq+ 43214 ChimerSeq STARFusion TCGA_RNA-Seq STX3-MS4A15 STX3 chr11 59523108 + MS4A15 chr11 60535040 + Exonic hg19 PRAD TCGA-HC-7209 23 136 CDS-5'UTR Intra-chr q12.1 q12.2 Seq+ 43215 ChimerSeq STARFusion TCGA_RNA-Seq STX3-MS4A15 STX3 chr11 59523108 + MS4A15 chr11 60535006 + Exonic hg19 PRAD TCGA-HC-7209 9 133 In-Frame Intra-chr q12.1 q12.2 Seq+ 43216 ChimerSeq STARFusion TCGA_RNA-Seq STX3-MS4A15 STX3 chr11 59523108 + MS4A15 chr11 60538764 + Exonic hg19 PRAD TCGA-HC-7209 5 133 In-Frame Intra-chr q12.1 q12.2 Seq+ 43217 ChimerSeq STARFusion TCGA_RNA-Seq KCNMA1-FARP1 KCNMA1 chr10 79397023 - FARP1 chr13 98865474 + Exonic hg19 PRAD TCGA-HC-7209 15 54 CDS-5'UTR Inter-chr q22.3 q32.2 Seq+ 43218 ChimerSeq STARFusion TCGA_RNA-Seq GPLD1-BANK1 GPLD1 chr6 24486303 - BANK1 chr4 102776192 + Exonic hg19 PRAD TCGA-HC-7209 6 53 Out-of-frame Inter-chr p22.3 q24 Seq+ 43219 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-TCF7L2 NFAT5 chr16 69600277 + TCF7L2 chr10 114900943 + Exonic hg19 PRAD TCGA-HC-7209 13 19 Out-of-frame Inter-chr q22.1 Transcription factor q25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 43220 ChimerSeq STARFusion TCGA_RNA-Seq AARSD1-CCR7 AARSD1 chr17 41113209 - CCR7 chr17 38715194 - Exonic hg19 PRAD TCGA-HC-7209 6 26 In-Frame Intra-chr q21.31 q21.2 Seq+ 43221 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 PRAD TCGA-HC-7209 7 4 In-Frame Intra-chr p13.3 p13.3 43222 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A39-EFCAB13 SLC25A39 chr17 42398426 - EFCAB13 chr17 45438744 + Exonic hg19 PRAD TCGA-G9-6494 7 53 Out-of-frame Intra-chr q21.31 q21.32 Seq+ 43223 ChimerSeq STARFusion TCGA_RNA-Seq ALDH3A2-PITPNM2 ALDH3A2 chr17 19568360 + PITPNM2 chr12 123477216 - Exonic hg19 PRAD TCGA-G9-6494 4 18 In-Frame Inter-chr p11.2 q24.31 Seq+ 43224 ChimerSeq STARFusion TCGA_RNA-Seq HIPK2-ARHGEF5 HIPK2 chr7 139311347 - ARHGEF5 chr7 144059751 + Exonic hg19 PRAD TCGA-G9-6496 2 9 CDS-5'UTR Intra-chr q34 CMGC:DYRK Tumor suppressor gene q35 Seq+ 43225 ChimerSeq STARFusion TCGA_RNA-Seq SPOCK1-SEPT7P3 SPOCK1 chr5 136602699 - SEPT7P3 chr7 35997746 + Exonic hg19 PRAD TCGA-XJ-A83H 3 19 Out-of-frame Inter-chr q31.2 p14.2 43226 ChimerSeq STARFusion TCGA_RNA-Seq TNK1-CHD3 TNK1 chr17 7290776 + CHD3 chr17 7814782 + Exonic hg19 PRAD TCGA-XJ-A83H 4 6 In-Frame Intra-chr TK:Ack Tumor suppressor gene p13.1 Seq+ 43227 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 PRAD TCGA-XA-A8JR 11 6 In-Frame Intra-chr p13.3 p13.3 43228 ChimerSeq STARFusion TCGA_RNA-Seq NCAM2-CRYL1 NCAM2 chr21 22370936 + CRYL1 chr13 20978880 - Exonic hg19 PRAD TCGA-EJ-5512 6 29 In-Frame Inter-chr q21.1 Tumor suppressor gene q12.11 Seq+ 43229 ChimerSeq STARFusion TCGA_RNA-Seq IKZF2-MICU2 IKZF2 chr2 213914437 - MICU2 chr13 22069457 - Exonic hg19 PRAD TCGA-EJ-5512 4 5 Out-of-frame Inter-chr q34 Tumor suppressor gene Transcription factor q12.11 Seq+ 43230 ChimerSeq STARFusion TCGA_RNA-Seq TM2D3-PTRF TM2D3 chr15 102190207 - PTRF chr17 40557406 - Exonic hg19 PRAD TCGA-EJ-5511 188 915 In-Frame Inter-chr q26.3 Seq+ 43231 ChimerSeq STARFusion TCGA_RNA-Seq TM2D3-PTRF TM2D3 chr15 102192474 - PTRF chr17 40557406 - Exonic hg19 PRAD TCGA-EJ-5511 37 913 Out-of-frame Inter-chr q26.3 Seq+ 43232 ChimerSeq STARFusion TCGA_RNA-Seq STAT3-ETV4 STAT3 chr17 40468807 - ETV4 chr17 41611353 - Exonic hg19 PRAD TCGA-EJ-5511 120 455 In-Frame Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q21.31 Oncogene Transcription factor Seq+ 43233 ChimerSeq STARFusion TCGA_RNA-Seq ADAM9-RGS20 ADAM9 chr8 38854679 + RGS20 chr8 54791818 + Exonic hg19 PRAD TCGA-EJ-5510 5 28 Out-of-frame Intra-chr q11.23 Seq+ 43234 ChimerSeq STARFusion TCGA_RNA-Seq ADAM9-RGS20 ADAM9 chr8 38854679 + RGS20 chr8 54852136 + Exonic hg19 PRAD TCGA-EJ-5510 3 28 Out-of-frame Intra-chr q11.23 Seq+ 43235 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF7-PTEN ARHGEF7 chr13 111896641 + PTEN chr10 89685270 + Exonic hg19 PRAD TCGA-EJ-5510 2 17 In-Frame Inter-chr q34 q23.31 Oncogene Tumor suppressor gene Seq+ 43236 ChimerSeq STARFusion TCGA_RNA-Seq KLK3-RPLP0 KLK3 chr19 51361547 + RPLP0 chr12 120636676 - Exonic hg19 PRAD TCGA-EJ-5517 3 15 Out-of-frame Inter-chr q13.33 q24.23 43237 ChimerSeq STARFusion TCGA_RNA-Seq EEA1-UBL3 EEA1 chr12 93181643 - UBL3 chr13 30351400 - Exonic hg19 PRAD TCGA-EJ-5516 23 29 In-Frame Inter-chr q22 Transcription factor q12.3 Seq+ 43238 ChimerSeq STARFusion TCGA_RNA-Seq MRPS27-HIST1H2BN MRPS27 chr5 71609908 - HIST1H2BN chr6 27809342 + Exonic hg19 PRAD TCGA-EJ-5516 7 24 CDS-3'UTR Inter-chr q13.2 p22.1 Seq+ 43239 ChimerSeq STARFusion TCGA_RNA-Seq COPB1-TLDC2 COPB1 chr11 14510038 - TLDC2 chr20 35504497 + Exonic hg19 PRAD TCGA-EJ-5516 3 37 Out-of-frame Inter-chr p15.2 q11.23 Seq+ 43240 ChimerSeq STARFusion TCGA_RNA-Seq HGD-CACNA1D HGD chr3 120389274 - CACNA1D chr3 53777038 + Exonic hg19 PRAD TCGA-EJ-5516 9 11 In-Frame Intra-chr q13.33 p21.1 Seq+ 43241 ChimerSeq STARFusion TCGA_RNA-Seq MFAP1-STRC MFAP1 chr15 44105185 - STRC chr15 43897597 - Exonic hg19 PRAD TCGA-EJ-5516 5 11 In-Frame Intra-chr q15.3 q15.3 Seq+ 43242 ChimerSeq STARFusion TCGA_RNA-Seq MFAP1-STRCP1 MFAP1 chr15 44105185 - STRCP1 chr15 43997075 - Exonic hg19 PRAD TCGA-EJ-5516 5 9 Out-of-frame Intra-chr q15.3 q15.3 43243 ChimerSeq STARFusion TCGA_RNA-Seq MFAP1-STRC MFAP1 chr15 44105185 - STRC chr15 43997075 - Exonic hg19 PRAD TCGA-EJ-5516 3 11 CDS-5'UTR Intra-chr q15.3 q15.3 Seq+ 43244 ChimerSeq STARFusion TCGA_RNA-Seq ING2-IDH1 ING2 chr4 184426520 + IDH1 chr2 209120313 - Exonic hg19 PRAD TCGA-EJ-5516 3 10 CDS-5'UTR Inter-chr q35.1 Tumor suppressor gene q34 Oncogene Tumor suppressor gene Seq+ 43245 ChimerSeq STARFusion TCGA_RNA-Seq UTRN-SLC22A23 UTRN chr6 144898424 + SLC22A23 chr6 3324236 - Exonic hg19 PRAD TCGA-EJ-5516 2 7 Out-of-frame Intra-chr q24.2 p25.2 Seq+ 43246 ChimerSeq STARFusion TCGA_RNA-Seq BLVRA-C7orf10 BLVRA chr7 43798333 + C7orf10 chr7 40899915 + Exonic hg19 PRAD TCGA-EJ-5515 6 2 5'UTR-CDS Intra-chr p13 43247 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-ECHDC1 PTPRK chr6 128841404 - ECHDC1 chr6 127652175 - Exonic hg19 PRAD TCGA-EJ-5514 28 99 In-Frame Intra-chr Tumor suppressor gene q22.33 Seq+ 43248 ChimerSeq STARFusion TCGA_RNA-Seq JMJD1C-RPL5 JMJD1C chr10 65140078 - RPL5 chr1 93306108 + Exonic hg19 PRAD TCGA-EJ-5514 7 37 In-Frame Inter-chr q21.3 p22.1 Tumor suppressor gene Seq+ 43249 ChimerSeq STARFusion TCGA_RNA-Seq PTPRD-C9orf92 PTPRD chr9 8633317 - C9orf92 chr9 16215897 - Exonic hg19 PRAD TCGA-EJ-5514 12 16 Out-of-frame Intra-chr Oncogene Tumor suppressor gene p22.3 Seq+ 43250 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38075947 + MIPOL1 chr14 37969113 + Exonic hg19 PRAD TCGA-EJ-5514 6 20 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 43251 ChimerSeq STARFusion TCGA_RNA-Seq RBM39-WFDC13 RBM39 chr20 34300941 - WFDC13 chr20 44333083 + Exonic hg19 PRAD TCGA-EJ-5514 3 18 In-Frame Intra-chr q11.22 q13.12 Seq+ 43252 ChimerSeq STARFusion TCGA_RNA-Seq ATP9A-TRPC4AP ATP9A chr20 50384841 - TRPC4AP chr20 33623111 - Exonic hg19 PRAD TCGA-EJ-5514 2 6 Out-of-frame Intra-chr q13.2 q11.22 Seq+ 43253 ChimerSeq STARFusion TCGA_RNA-Seq HKR1-FECH HKR1 chr19 37838774 + FECH chr18 55218606 - Exonic hg19 PRAD TCGA-EJ-5514 2 6 Out-of-frame Inter-chr q13.12 Transcription factor q21.31 Seq+ 43254 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L2-SCCPDH SKIV2L2 chr5 54711960 + SCCPDH chr1 246890194 + Exonic hg19 PRAD TCGA-EJ-5519 24 168 In-Frame Inter-chr q11.2 q44 Seq+ 43255 ChimerSeq STARFusion TCGA_RNA-Seq C1orf132-CHRM3 C1orf132 chr1 208041271 - CHRM3 chr1 240070733 + Exonic hg19 PRAD TCGA-EJ-5519 4 55 Out-of-frame Intra-chr q32.2 q43 Seq+ 43256 ChimerSeq STARFusion TCGA_RNA-Seq C1orf132-CHRM3 C1orf132 chr1 208041271 - CHRM3 chr1 239990552 + Exonic hg19 PRAD TCGA-EJ-5519 3 55 Out-of-frame Intra-chr q32.2 q43 Seq+ 43257 ChimerSeq STARFusion TCGA_RNA-Seq C1orf132-CHRM3 C1orf132 chr1 208041271 - CHRM3 chr1 239990153 + Exonic hg19 PRAD TCGA-EJ-5519 2 55 Out-of-frame Intra-chr q32.2 q43 Seq+ 43258 ChimerSeq STARFusion TCGA_RNA-Seq CDK14-DLD CDK14 chr7 90233563 + DLD chr7 107542183 + Exonic hg19 PRAD TCGA-EJ-5519 5 31 5'UTR-CDS Intra-chr q21.13 q31.1 Seq+ 43259 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP29-DNAJC6 ARHGAP29 chr1 94696963 - DNAJC6 chr1 65830318 + Exonic hg19 PRAD TCGA-EJ-5519 4 34 In-Frame Intra-chr p22.1 Tumor suppressor gene p31.3 Seq+ 43260 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP29-DNAJC6 ARHGAP29 chr1 94702971 - DNAJC6 chr1 65830318 + Exonic hg19 PRAD TCGA-EJ-5519 4 31 5'UTR-5'UTR Intra-chr p22.1 Tumor suppressor gene p31.3 Seq+ 43261 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP29-DNAJC6 ARHGAP29 chr1 94696963 - DNAJC6 chr1 65811294 + Exonic hg19 PRAD TCGA-EJ-5519 3 31 CDS-5'UTR Intra-chr p22.1 Tumor suppressor gene p31.3 Seq+ 43262 ChimerSeq STARFusion TCGA_RNA-Seq TNPO1-ENC1 TNPO1 chr5 72168547 + ENC1 chr5 73933443 - Exonic hg19 PRAD TCGA-EJ-5519 4 19 CDS-5'UTR Intra-chr q13.2 q13.3 Seq+ 43263 ChimerSeq STARFusion TCGA_RNA-Seq TNPO1-ENC1 TNPO1 chr5 72168547 + ENC1 chr5 73933526 - Exonic hg19 PRAD TCGA-EJ-5519 2 19 CDS-5'UTR Intra-chr q13.2 q13.3 Seq+ 43264 ChimerSeq STARFusion TCGA_RNA-Seq MEF2D-APOA2 MEF2D chr1 156470278 - APOA2 chr1 161193215 - Exonic hg19 PRAD TCGA-EJ-5518 148 773 5'UTR-5'UTR Intra-chr q22 Transcription factor q23.3 Seq+ 43265 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPUL1-SLC8A2 HNRNPUL1 chr19 41787180 + SLC8A2 chr19 47960851 - Exonic hg19 PRAD TCGA-EJ-5518 50 111 In-Frame Intra-chr q13.2 q13.32 Seq+ 43266 ChimerSeq STARFusion TCGA_RNA-Seq TOR1AIP2-IFI16 TOR1AIP2 chr1 179846374 - IFI16 chr1 159019222 + Exonic hg19 PRAD TCGA-EJ-5518 32 137 5'UTR-CDS Intra-chr q25.2 q23.1 Tumor suppressor gene Seq+ 43267 ChimerSeq STARFusion TCGA_RNA-Seq USF1-UCK2 USF1 chr1 161015648 - UCK2 chr1 165865427 + Exonic hg19 PRAD TCGA-EJ-5518 27 130 5'UTR-CDS Intra-chr q23.3 Transcription factor q24.1 Seq+ 43268 ChimerSeq STARFusion TCGA_RNA-Seq GPR89B-FCGR2B GPR89B chr1 147400691 + FCGR2B chr1 161551161 + Exonic hg19 PRAD TCGA-EJ-5518 5 166 CDS-5'UTR Intra-chr q21.2 q23.3 43269 ChimerSeq STARFusion TCGA_RNA-Seq GPR89B-FCGR2C GPR89B chr1 147400691 + FCGR2C chr1 161551161 + Exonic hg19 PRAD TCGA-EJ-5518 5 156 CDS-5'UTR Intra-chr q21.2 q23.3 Seq+ 43270 ChimerSeq STARFusion TCGA_RNA-Seq TOR1AIP2-IFI16 TOR1AIP2 chr1 179846374 - IFI16 chr1 159015087 + Exonic hg19 PRAD TCGA-EJ-5518 12 82 5'UTR-CDS Intra-chr q25.2 q23.1 Tumor suppressor gene Seq+ 43271 ChimerSeq STARFusion TCGA_RNA-Seq EDEM3-HHAT EDEM3 chr1 184677287 - HHAT chr1 210847630 + Exonic hg19 PRAD TCGA-EJ-5518 14 63 Out-of-frame Intra-chr q25.3 Seq+ 43272 ChimerSeq STARFusion TCGA_RNA-Seq STX6-PRRC2C STX6 chr1 180971742 - PRRC2C chr1 171560726 + Exonic hg19 PRAD TCGA-EJ-5518 10 68 In-Frame Intra-chr q25.3 q24.3 Seq+ 43273 ChimerSeq STARFusion TCGA_RNA-Seq RASAL2-RABGAP1L RASAL2 chr1 178359341 + RABGAP1L chr1 174200283 + Exonic hg19 PRAD TCGA-EJ-5518 10 57 Out-of-frame Intra-chr q25.2 Tumor suppressor gene q25.1 Seq+ 43274 ChimerSeq STARFusion TCGA_RNA-Seq SUCO-RASAL2 SUCO chr1 172520766 + RASAL2 chr1 178359235 + Exonic hg19 PRAD TCGA-EJ-5518 10 50 Out-of-frame Intra-chr q24.3 q25.2 Tumor suppressor gene Seq+ 43275 ChimerSeq STARFusion TCGA_RNA-Seq GPR89B-FCGR2B GPR89B chr1 147400691 + FCGR2B chr1 161551131 + Exonic hg19 PRAD TCGA-EJ-5518 4 69 CDS-5'UTR Intra-chr q21.2 q23.3 43276 ChimerSeq STARFusion TCGA_RNA-Seq GPR89B-FCGR2C GPR89B chr1 147400691 + FCGR2C chr1 161551131 + Exonic hg19 PRAD TCGA-EJ-5518 4 60 CDS-5'UTR Intra-chr q21.2 q23.3 Seq+ 43277 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2NL-NUAK2 NOTCH2NL chr1 145209436 + NUAK2 chr1 205280953 - Exonic hg19 PRAD TCGA-EJ-5518 9 36 5'UTR-CDS Intra-chr q21.1 q32.1 Seq+ 43278 ChimerSeq STARFusion TCGA_RNA-Seq RASAL2-RABGAP1L RASAL2 chr1 178359341 + RABGAP1L chr1 174210621 + Exonic hg19 PRAD TCGA-EJ-5518 2 57 Out-of-frame Intra-chr q25.2 Tumor suppressor gene q25.1 Seq+ 43279 ChimerSeq STARFusion TCGA_RNA-Seq C1orf132-SMYD3 C1orf132 chr1 207989274 - SMYD3 chr1 245927451 - Exonic hg19 PRAD TCGA-EJ-5518 7 30 Out-of-frame Intra-chr q32.2 q44 Transcription factor Seq+ 43280 ChimerSeq STARFusion TCGA_RNA-Seq CHRM3-SYT14 CHRM3 chr1 239795586 + SYT14 chr1 210267667 + Exonic hg19 PRAD TCGA-EJ-5518 3 45 5'UTR-5'UTR Intra-chr q43 q32.2 Seq+ 43281 ChimerSeq STARFusion TCGA_RNA-Seq SUCO-RASAL2 SUCO chr1 172502637 + RASAL2 chr1 178359235 + Exonic hg19 PRAD TCGA-EJ-5518 2 49 Out-of-frame Intra-chr q24.3 q25.2 Tumor suppressor gene Seq+ 43282 ChimerSeq STARFusion TCGA_RNA-Seq SMYD3-COPA SMYD3 chr1 245927343 - COPA chr1 160305112 - Exonic hg19 PRAD TCGA-EJ-5518 3 29 In-Frame Intra-chr q44 Transcription factor q23.2 Seq+ 43283 ChimerSeq STARFusion TCGA_RNA-Seq PIP5K1A-ITLN1 PIP5K1A chr1 151204841 + ITLN1 chr1 160854673 - Exonic hg19 PRAD TCGA-EJ-5518 3 21 CDS-5'UTR Intra-chr q21.3 q23.3 Seq+ 43284 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R5A-CHRM3 PPP2R5A chr1 212459633 + CHRM3 chr1 239656009 + Exonic hg19 PRAD TCGA-EJ-5518 2 21 CDS-5'UTR Intra-chr q32.3 q43 Seq+ 43285 ChimerSeq STARFusion TCGA_RNA-Seq CEP350-GPR161 CEP350 chr1 179924277 + GPR161 chr1 168074132 - Exonic hg19 PRAD TCGA-EJ-5518 2 17 5'UTR-5'UTR Intra-chr q25.2 q24.2 Seq+ 43286 ChimerSeq STARFusion TCGA_RNA-Seq POU2F1-RPRD2 POU2F1 chr1 167190195 + RPRD2 chr1 150413399 + Exonic hg19 PRAD TCGA-EJ-5518 2 17 Out-of-frame Intra-chr q24.2 Transcription factor q21.2 Seq+ 43287 ChimerSeq STARFusion TCGA_RNA-Seq ASH1L-NSL1 ASH1L chr1 155490891 - NSL1 chr1 212960979 - Exonic hg19 PRAD TCGA-EJ-5518 2 14 In-Frame Intra-chr q22 Transcription factor q32.3 Seq+ 43288 ChimerSeq STARFusion TCGA_RNA-Seq BMPR1B-ETV1 BMPR1B chr4 95679219 + ETV1 chr7 14028764 - Exonic hg19 PRAD TCGA-SU-A7E7 16 34 5'UTR-5'UTR Inter-chr q22.3 TKL:STKR p21.2 Oncogene Transcription factor Seq+ 43289 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2-RASSF5 NOTCH2 chr1 120611948 - RASSF5 chr1 206711501 + Exonic hg19 PRAD TCGA-SU-A7E7 5 16 In-Frame Intra-chr p12 Oncogene Tumor suppressor gene q32.1 Tumor suppressor gene 43290 ChimerSeq STARFusion TCGA_RNA-Seq SLC26A4-NNMT SLC26A4 chr7 107342502 + NNMT chr11 114133570 + Exonic hg19 PRAD TCGA-EJ-A6RC 5 7 CDS-5'UTR Inter-chr q22.3 q23.2 Seq+ 43291 ChimerSeq STARFusion TCGA_RNA-Seq ERG-TMPRSS2 ERG chr21 39947586 - TMPRSS2 chr21 42866505 - Exonic hg19 PRAD TCGA-EJ-7793 2 13 In-Frame Intra-chr q22.2 Oncogene Transcription factor q22.3 Seq+ 43292 ChimerSeq STARFusion TCGA_RNA-Seq DLGAP1-ARHGAP28 DLGAP1 chr18 4455006 - ARHGAP28 chr18 6824761 + Exonic hg19 PRAD TCGA-EJ-7791 3 17 5'UTR-5'UTR Intra-chr p11.31 p11.31 Seq+ 43293 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010683 - TTC18 chr10 75016175 - Exonic hg19 PRAD TCGA-EJ-7797 93 510 Out-of-frame Intra-chr q22.2 43294 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010596 - TTC18 chr10 75016174 - Exonic hg19 PRAD TCGA-EJ-7797 44 484 3'UTR-CDS Intra-chr q22.2 43295 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010573 - TTC18 chr10 75016174 - Exonic hg19 PRAD TCGA-EJ-7797 43 484 3'UTR-CDS Intra-chr q22.2 43296 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75011521 - TTC18 chr10 75016174 - Exonic hg19 PRAD TCGA-EJ-7797 23 484 Out-of-frame Intra-chr q22.2 43297 ChimerSeq STARFusion TCGA_RNA-Seq BCAM-KLK3 BCAM chr19 45322621 + KLK3 chr19 51359516 + Exonic hg19 PRAD TCGA-EJ-7797 5 4 Out-of-frame Intra-chr q13.32 q13.33 43298 ChimerSeq STARFusion TCGA_RNA-Seq ACPP-AXL ACPP chr3 132075699 + AXL chr19 41748788 + Exonic hg19 PRAD TCGA-J4-A6G3 44 108 In-Frame Inter-chr q22.1 q13.2 TK:Axl Oncogene Seq+ 43299 ChimerSeq STARFusion TCGA_RNA-Seq FNBP4-MYBPC3 FNBP4 chr11 47752926 - MYBPC3 chr11 47373056 - Exonic hg19 PRAD TCGA-J4-A6G1 3 12 In-Frame Intra-chr p11.2 p11.2 Seq+ 43300 ChimerSeq STARFusion TCGA_RNA-Seq CLUAP1-NAA60 CLUAP1 chr16 3551089 + NAA60 chr16 3529471 + Exonic hg19 PRAD TCGA-J4-A6G1 2 8 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 43301 ChimerSeq STARFusion TCGA_RNA-Seq CLUAP1-NAA60 CLUAP1 chr16 3551089 + NAA60 chr16 3529471 + Exonic hg19 PRAD TCGA-J4-A6G1 2 8 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 43302 ChimerSeq STARFusion TCGA_RNA-Seq NDUFS3-ERO1LB NDUFS3 chr11 47604020 + ERO1LB chr1 236381876 - Exonic hg19 PRAD TCGA-EJ-5527 16 34 Out-of-frame Inter-chr p11.2 Seq+ 43303 ChimerSeq STARFusion TCGA_RNA-Seq RBPJ-C16orf46 RBPJ chr4 26417262 + C16orf46 chr16 81087699 - Exonic hg19 PRAD TCGA-EJ-5527 8 17 In-Frame Inter-chr p15.2 Transcription factor q23.2 Seq+ 43304 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2-PDE4DIP NOTCH2 chr1 120572529 - PDE4DIP chr1 145021167 - Exonic hg19 PRAD TCGA-EJ-5527 5 6 In-Frame Intra-chr p12 Oncogene Tumor suppressor gene q21.2 Oncogene 43305 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-SDCCAG8 PUM1 chr1 31501643 - SDCCAG8 chr1 243493842 + Exonic hg19 PRAD TCGA-EJ-5527 2 17 In-Frame Intra-chr p35.2 Seq+ 43306 ChimerSeq STARFusion TCGA_RNA-Seq DUSP16-LOH12CR1 DUSP16 chr12 12715051 - LOH12CR1 chr12 12588562 + Exonic hg19 PRAD TCGA-G9-7525 5 29 5'UTR-CDS Intra-chr Seq+ 43307 ChimerSeq STARFusion TCGA_RNA-Seq YBX3-LOH12CR1 YBX3 chr12 10875449 - LOH12CR1 chr12 12588562 + Exonic hg19 PRAD TCGA-G9-7525 3 12 Out-of-frame Intra-chr p13.2 Transcription factor 43308 ChimerSeq STARFusion TCGA_RNA-Seq NCK2-KDM4C NCK2 chr2 106361595 + KDM4C chr9 7165238 + Exonic hg19 PRAD TCGA-G9-7525 2 6 5'UTR-CDS Inter-chr q12.2 p24.1 Seq+ 43309 ChimerSeq STARFusion TCGA_RNA-Seq TBX3-MLPH TBX3 chr12 115109226 - MLPH chr2 238462721 + Exonic hg19 PRAD TCGA-G9-7523 9 1 Out-of-frame Inter-chr q24.21 Transcription factor q37.3 43310 ChimerSeq STARFusion TCGA_RNA-Seq HDAC8-PHKA1 HDAC8 chrX 71787739 - PHKA1 chrX 71804152 - Exonic hg19 PRAD TCGA-G9-7523 3 11 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 43311 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649522 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-G9-7522 53 252 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 43312 ChimerSeq STARFusion TCGA_RNA-Seq RERE-OOEP RERE chr1 8482787 - OOEP chr6 74079108 - Exonic hg19 PRAD TCGA-G9-7522 5 93 Out-of-frame Inter-chr p36.23 q13 Seq+ 43313 ChimerSeq STARFusion TCGA_RNA-Seq ZFHX3-ZMAT4 ZFHX3 chr16 72845476 - ZMAT4 chr8 40438780 - Exonic hg19 PRAD TCGA-G9-7522 3 13 Out-of-frame Inter-chr q22.3 Tumor suppressor gene Transcription factor p11.21 Transcription factor Seq+ 43314 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0825-MCTP1 KIAA0825 chr5 93954205 - MCTP1 chr5 94050591 - Exonic hg19 PRAD TCGA-G9-7521 3 10 5'UTR-CDS Intra-chr q15 q15 Seq+ 43315 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT6-ADAM9 AGPAT6 chr8 41456823 + ADAM9 chr8 38899465 + Exonic hg19 PRAD TCGA-EJ-5522 25 43 Out-of-frame Intra-chr Seq+ 43316 ChimerSeq STARFusion TCGA_RNA-Seq LRBA-HFE2 LRBA chr4 151656410 - HFE2 chr1 145415279 + Exonic hg19 PRAD TCGA-VN-A88N 4 13 Out-of-frame Inter-chr q31.3 q21.1 Seq+ 43317 ChimerSeq STARFusion TCGA_RNA-Seq PDE4D-DEPDC1B PDE4D chr5 59783769 - DEPDC1B chr5 59895087 - Exonic hg19 PRAD TCGA-VN-A88O 8 23 5'UTR-CDS Intra-chr q12.1 q12.1 Seq+ 43318 ChimerSeq STARFusion TCGA_RNA-Seq ERG-RPS18 ERG chr21 39947586 - RPS18 chr6 33240405 + Exonic hg19 PRAD TCGA-VN-A88L 35 96 In-Frame Inter-chr q22.2 Oncogene Transcription factor Seq+ 43319 ChimerSeq STARFusion TCGA_RNA-Seq DLD-SCEL DLD chr7 107531734 + SCEL chr13 78171680 + Exonic hg19 PRAD TCGA-VN-A88L 12 85 Out-of-frame Inter-chr q31.1 q22.3 Seq+ 43320 ChimerSeq STARFusion TCGA_RNA-Seq KIF5B-HHAT KIF5B chr10 32337392 - HHAT chr1 210637849 + Exonic hg19 PRAD TCGA-VN-A88L 4 31 In-Frame Inter-chr p11.22 Seq+ 43321 ChimerSeq STARFusion TCGA_RNA-Seq KIF5B-HHAT KIF5B chr10 32337392 - HHAT chr1 210686497 + Exonic hg19 PRAD TCGA-VN-A88L 2 30 Out-of-frame Inter-chr p11.22 Seq+ 43322 ChimerSeq STARFusion TCGA_RNA-Seq SHROOM3-NNMT SHROOM3 chr4 77610855 + NNMT chr11 114168673 + Exonic hg19 PRAD TCGA-VN-A88L 3 19 Out-of-frame Inter-chr q21.1 q23.2 Seq+ 43323 ChimerSeq STARFusion TCGA_RNA-Seq SHROOM3-NNMT SHROOM3 chr4 77507622 + NNMT chr11 114168673 + Exonic hg19 PRAD TCGA-VN-A88L 2 19 Out-of-frame Inter-chr q21.1 q23.2 Seq+ 43324 ChimerSeq STARFusion TCGA_RNA-Seq WWTR1-ATR WWTR1 chr3 149374663 - ATR chr3 142168444 - Exonic hg19 PRAD TCGA-VN-A88M 29 116 CDS-3'UTR Intra-chr q25.1 q23 Atypical:PIKK Oncogene Tumor suppressor gene Seq+ 43325 ChimerSeq STARFusion TCGA_RNA-Seq CTU1-KLK4 CTU1 chr19 51607319 - KLK4 chr19 51414005 - Exonic hg19 PRAD TCGA-VN-A88M 6 5 CDS-5'UTR Intra-chr q13.41 q13.41 43326 ChimerSeq STARFusion TCGA_RNA-Seq ZNF148-MYLK ZNF148 chr3 125042153 - MYLK chr3 123512691 - Exonic hg19 PRAD TCGA-VN-A88P 4 3 5'UTR-5'UTR Intra-chr q21.2 Transcription factor q21.1 Seq+ 43327 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R12A-IMMT PPP1R12A chr12 80328475 - IMMT chr2 86408495 - Exonic hg19 PRAD TCGA-VN-A88P 3 3 In-Frame Inter-chr q21.31 p11.2 Seq+ 43328 ChimerSeq STARFusion TCGA_RNA-Seq RYK-KALRN RYK chr3 133907681 - KALRN chr3 124149503 + Exonic hg19 PRAD TCGA-KK-A6E1 67 306 Out-of-frame Intra-chr q22.2 TK:Ryk q21.1 Seq+ 43329 ChimerSeq STARFusion TCGA_RNA-Seq ARF1-HSPA9 ARF1 chr1 228270466 + HSPA9 chr5 137904738 - Exonic hg19 PRAD TCGA-KK-A6E1 93 177 5'UTR-CDS Inter-chr q42.13 Tumor suppressor gene q31.2 Seq+ 43330 ChimerSeq STARFusion TCGA_RNA-Seq ARF1-HSPA9 ARF1 chr1 228271053 + HSPA9 chr5 137904738 - Exonic hg19 PRAD TCGA-KK-A6E1 14 170 5'UTR-CDS Inter-chr q42.13 Tumor suppressor gene q31.2 Seq+ 43331 ChimerSeq STARFusion TCGA_RNA-Seq PLA2G16-SNHG1 PLA2G16 chr11 63365533 - SNHG1 chr11 62621305 - Exonic hg19 PRAD TCGA-KK-A6E1 16 115 CDS-3'UTR Intra-chr q13.1 Tumor suppressor gene q12.3 Seq+ 43332 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D25-HSPA9 TBC1D25 chrX 48403411 + HSPA9 chr5 137897478 - Exonic hg19 PRAD TCGA-KK-A6E1 17 81 Out-of-frame Inter-chr p11.23 q31.2 Seq+ 43333 ChimerSeq STARFusion TCGA_RNA-Seq ERG-KCNJ6 ERG chr21 39947586 - KCNJ6 chr21 38997786 - Exonic hg19 PRAD TCGA-KK-A6E1 15 42 Out-of-frame Intra-chr q22.2 Oncogene Transcription factor q22.13 Seq+ 43334 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D25-HSPA9 TBC1D25 chrX 48399830 + HSPA9 chr5 137897478 - Exonic hg19 PRAD TCGA-KK-A6E1 7 73 Out-of-frame Inter-chr p11.23 q31.2 Seq+ 43335 ChimerSeq STARFusion TCGA_RNA-Seq FAU-SRRM1 FAU chr11 64888453 - SRRM1 chr1 24975350 + Exonic hg19 PRAD TCGA-KK-A6E1 8 63 In-Frame Inter-chr q13.1 p36.11 Seq+ 43336 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D25-HSPA9 TBC1D25 chrX 48398308 + HSPA9 chr5 137897478 - Exonic hg19 PRAD TCGA-KK-A6E1 5 73 In-Frame Inter-chr p11.23 q31.2 Seq+ 43337 ChimerSeq STARFusion TCGA_RNA-Seq PTBP1-UBE3C PTBP1 chr19 804438 + UBE3C chr7 157009561 + Exonic hg19 PRAD TCGA-KK-A6E1 4 74 In-Frame Inter-chr p13.3 q36.3 Seq+ 43338 ChimerSeq STARFusion TCGA_RNA-Seq SRRM1-FAU SRRM1 chr1 24974293 + FAU chr11 64888246 - Exonic hg19 PRAD TCGA-KK-A6E1 11 38 Out-of-frame Inter-chr p36.11 q13.1 Seq+ 43339 ChimerSeq STARFusion TCGA_RNA-Seq FAU-SRRM1 FAU chr11 64888194 - SRRM1 chr1 24974082 + Exonic hg19 PRAD TCGA-KK-A6E1 5 44 Out-of-frame Inter-chr q13.1 p36.11 Seq+ 43340 ChimerSeq STARFusion TCGA_RNA-Seq EVA1C-CBR3 EVA1C chr21 33825816 + CBR3 chr21 37518374 + Exonic hg19 PRAD TCGA-KK-A6E1 6 34 Out-of-frame Intra-chr q22.11 q22.12 Seq+ 43341 ChimerSeq STARFusion TCGA_RNA-Seq EVA1C-CBR3 EVA1C chr21 33785321 + CBR3 chr21 37518374 + Exonic hg19 PRAD TCGA-KK-A6E1 2 28 Out-of-frame Intra-chr q22.11 q22.12 Seq+ 43342 ChimerSeq STARFusion TCGA_RNA-Seq TOX3-C16orf97 TOX3 chr16 52580549 - C16orf97 chr16 52092340 - Exonic hg19 PRAD TCGA-KK-A6E1 4 9 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 43343 ChimerSeq STARFusion TCGA_RNA-Seq TTLL7-SAMD13 TTLL7 chr1 84369762 - SAMD13 chr1 84791320 + Exonic hg19 PRAD TCGA-KK-A6E1 4 8 Out-of-frame Intra-chr p31.1 p31.1 Seq+ 43344 ChimerSeq STARFusion TCGA_RNA-Seq ETS2-WRB ETS2 chr21 40178044 + WRB chr21 40765092 + Exonic hg19 PRAD TCGA-KK-A6E1 2 5 In-Frame Intra-chr q22.2 Tumor suppressor gene Transcription factor q22.2 Seq+ 43345 ChimerSeq STARFusion TCGA_RNA-Seq U2SURP-PARP9 U2SURP chr3 142757802 + PARP9 chr3 122255920 - Exonic hg19 PRAD TCGA-KK-A6E1 2 5 Out-of-frame Intra-chr q23 q21.1 Seq+ 43346 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-PIP5K1P1 KCTD20 chr6 36457998 + PIP5K1P1 chr6 7987765 + Exonic hg19 PRAD TCGA-KK-A6E0 9 0 Out-of-frame Intra-chr p21.31 p24.3 43347 ChimerSeq STARFusion TCGA_RNA-Seq RERE-EXOSC7 RERE chr1 8716032 - EXOSC7 chr3 45030632 + Exonic hg19 PRAD TCGA-KK-A6E3 2 4 Out-of-frame Inter-chr p36.23 p21.31 Seq+ 43348 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38092208 + MIPOL1 chr14 38016110 + Exonic hg19 PRAD TCGA-KK-A6E5 2 11 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 43349 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38075947 + MIPOL1 chr14 37969113 + Exonic hg19 PRAD TCGA-KK-A6E5 2 11 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 43350 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38065213 + MIPOL1 chr14 37969113 + Exonic hg19 PRAD TCGA-KK-A6E5 2 11 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 43351 ChimerSeq STARFusion TCGA_RNA-Seq GPHN-RAD51B GPHN chr14 67243239 + RAD51B chr14 68301797 + Exonic hg19 PRAD TCGA-KK-A6E4 3 4 In-Frame Intra-chr q23.3 q24.1 Seq+ 43352 ChimerSeq STARFusion TCGA_RNA-Seq PDIA4-HACE1 PDIA4 chr7 148725413 - HACE1 chr6 105232360 - Exonic hg19 PRAD TCGA-KK-A6E6 2 19 Out-of-frame Inter-chr q36.1 q16.3 Tumor suppressor gene Seq+ 43353 ChimerSeq STARFusion TCGA_RNA-Seq ROCK1-RBM47 ROCK1 chr18 18650493 - RBM47 chr4 40546523 - Exonic hg19 PRAD TCGA-KK-A6E6 2 10 CDS-5'UTR Inter-chr q11.1 AGC:DMPK p14 Seq+ 43354 ChimerSeq STARFusion TCGA_RNA-Seq ERG-SRPK2 ERG chr21 39947586 - SRPK2 chr7 105039700 - Exonic hg19 PRAD TCGA-KK-A6E6 3 5 5'UTR-5'UTR Inter-chr q22.2 Oncogene Transcription factor q22.3 CMGC:SRPK Seq+ 43355 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-LINC00636 ZBTB20 chr3 114693213 - LINC00636 chr3 107642478 + Exonic hg19 PRAD TCGA-KK-A6E8 3 14 Out-of-frame Intra-chr q13.31 Transcription factor q13.12 43356 ChimerSeq STARFusion TCGA_RNA-Seq PRR15L-KCNH4 PRR15L chr17 46035023 - KCNH4 chr17 40309136 - Exonic hg19 PRAD TCGA-G9-6348 30 205 5'UTR-3'UTR Intra-chr q21.32 q21.2 Seq+ 43357 ChimerSeq STARFusion TCGA_RNA-Seq PRR15L-RAB5C PRR15L chr17 46035023 - RAB5C chr17 40282608 - Exonic hg19 PRAD TCGA-G9-6348 17 149 5'UTR-5'UTR Intra-chr q21.32 q21.2 Seq+ 43358 ChimerSeq STARFusion TCGA_RNA-Seq FAM217B-CDH12P1 FAM217B chr20 58517567 + CDH12P1 chr5 70156406 - Exonic hg19 PRAD TCGA-G9-6348 13 41 Out-of-frame Inter-chr q13.33 q13.2 43359 ChimerSeq STARFusion TCGA_RNA-Seq ACVR2A-AKT3 ACVR2A chr2 148602776 + AKT3 chr1 243828185 - Exonic hg19 PRAD TCGA-G9-6348 5 9 In-Frame Inter-chr q22.3 Oncogene AGC:Akt Oncogene Seq+ 43360 ChimerSeq STARFusion TCGA_RNA-Seq MAP1B-SLC27A2 MAP1B chr5 71411626 + SLC27A2 chr15 50489697 + Exonic hg19 PRAD TCGA-G9-6348 2 8 In-Frame Inter-chr q13.2 q21.2 Seq+ 43361 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880008 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-G9-6371 570 358 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 43362 ChimerSeq STARFusion TCGA_RNA-Seq REXO2-NXPE1 REXO2 chr11 114310397 + NXPE1 chr11 114423602 - Exonic hg19 PRAD TCGA-G9-6371 3 8 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 43363 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KLK2 EGFR chr7 55242537 + KLK2 chr19 51381659 + Exonic hg19 PRAD TCGA-G9-6371 3 7 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q13.33 43364 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-CCDC12 MAP4 chr3 47912303 - CCDC12 chr3 46982555 - Exonic hg19 PRAD TCGA-G9-6339 17 76 In-Frame Intra-chr p21.31 p21.31 Seq+ 43365 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-CCDC12 MAP4 chr3 47912348 - CCDC12 chr3 46982555 - Exonic hg19 PRAD TCGA-G9-6339 3 74 In-Frame Intra-chr p21.31 p21.31 Seq+ 43366 ChimerSeq STARFusion TCGA_RNA-Seq DHX15-ETV1 DHX15 chr4 24585946 - ETV1 chr7 13975521 - Exonic hg19 PRAD TCGA-G9-6339 10 35 In-Frame Inter-chr p15.2 p21.2 Oncogene Transcription factor Seq+ 43367 ChimerSeq STARFusion TCGA_RNA-Seq RYBP-CNTN4 RYBP chr3 72495647 - CNTN4 chr3 2777899 + Exonic hg19 PRAD TCGA-G9-6339 2 11 Out-of-frame Intra-chr p26.3 Seq+ 43368 ChimerSeq STARFusion TCGA_RNA-Seq NRAP-SLC35A4 NRAP chr10 115348728 - SLC35A4 chr5 139947743 + Exonic hg19 PRAD TCGA-G9-6338 10 1 Out-of-frame Inter-chr q25.3 q31.3 Seq+ 43369 ChimerSeq STARFusion TCGA_RNA-Seq PIAS1-HMCN2 PIAS1 chr15 68379088 + HMCN2 chr9 133297964 + Exonic hg19 PRAD TCGA-KK-A7B1 13 57 Out-of-frame Inter-chr q23 Tumor suppressor gene q34.11 Seq+ 43370 ChimerSeq STARFusion TCGA_RNA-Seq KMT2C-PRKAG2 KMT2C chr7 151917608 - PRKAG2 chr7 151372723 - Exonic hg19 PRAD TCGA-KK-A7B1 8 31 Out-of-frame Intra-chr q36.1 Oncogene Tumor suppressor gene q36.1 43371 ChimerSeq STARFusion TCGA_RNA-Seq RNF38-LMOD2 RNF38 chr9 36424610 - LMOD2 chr7 123301914 + Exonic hg19 PRAD TCGA-KK-A7B1 3 31 5'UTR-CDS Inter-chr p13.2 q31.32 Seq+ 43372 ChimerSeq STARFusion TCGA_RNA-Seq RNF38-LMOD2 RNF38 chr9 36400551 - LMOD2 chr7 123301914 + Exonic hg19 PRAD TCGA-KK-A7B1 3 29 5'UTR-CDS Inter-chr p13.2 q31.32 Seq+ 43373 ChimerSeq STARFusion TCGA_RNA-Seq GPD1L-CNOT10 GPD1L chr3 32188226 + CNOT10 chr3 32750162 + Exonic hg19 PRAD TCGA-KK-A7B1 5 14 In-Frame Intra-chr p22.3 p22.3 Seq+ 43374 ChimerSeq STARFusion TCGA_RNA-Seq PTEN-LIPJ PTEN chr10 89690846 + LIPJ chr10 90362333 + Exonic hg19 PRAD TCGA-KK-A7B1 3 22 Out-of-frame Intra-chr q23.31 Oncogene Tumor suppressor gene q23.31 KB Seq+ 43375 ChimerSeq STARFusion TCGA_RNA-Seq GLB1-PSD2 GLB1 chr3 33094983 - PSD2 chr5 139215308 + Exonic hg19 PRAD TCGA-KK-A7B1 3 17 In-Frame Inter-chr p22.3 q31.2 Seq+ 43376 ChimerSeq STARFusion TCGA_RNA-Seq LMCD1-ZNF589 LMCD1 chr3 8543666 + ZNF589 chr3 48302303 + Exonic hg19 PRAD TCGA-KK-A7B1 5 8 In-Frame Intra-chr p25.3 p21.31 Transcription factor Seq+ 43377 ChimerSeq STARFusion TCGA_RNA-Seq PDZRN3-THRB PDZRN3 chr3 73651505 - THRB chr3 24378862 - Exonic hg19 PRAD TCGA-KK-A7B1 4 8 CDS-5'UTR Intra-chr p13 p24.2 Tumor suppressor gene Transcription factor Seq+ 43378 ChimerSeq STARFusion TCGA_RNA-Seq MED15-GPATCH2L MED15 chr22 20862033 + GPATCH2L chr14 76638186 + Exonic hg19 PRAD TCGA-KK-A7B1 2 6 Out-of-frame Inter-chr q11.21 q24.3 Seq+ 43379 ChimerSeq STARFusion TCGA_RNA-Seq FAM101A-EIF2S2 FAM101A chr12 124458567 + EIF2S2 chr20 32693351 - Exonic hg19 PRAD TCGA-KK-A7B0 6 14 5'UTR-CDS Inter-chr q11.22 43380 ChimerSeq STARFusion TCGA_RNA-Seq ZNF664-EIF2S2 ZNF664 chr12 124458567 + EIF2S2 chr20 32693351 - Exonic hg19 PRAD TCGA-KK-A7B0 6 14 5'UTR-CDS Inter-chr q24.31 Transcription factor q11.22 Seq+ 43381 ChimerSeq STARFusion TCGA_RNA-Seq ATAD1-CTSLP1 ATAD1 chr10 89527430 - CTSLP1 chr10 89148633 - Exonic hg19 PRAD TCGA-KK-A7B3 33 105 Out-of-frame Intra-chr q23.2 43382 ChimerSeq STARFusion TCGA_RNA-Seq RRAS2-FHIT RRAS2 chr11 14380309 - FHIT chr3 59908140 - Exonic hg19 PRAD TCGA-KK-A7B3 19 157 In-Frame Inter-chr p15.2 p14.2 Tumor suppressor gene Seq+ 43383 ChimerSeq STARFusion TCGA_RNA-Seq RRAS2-FHIT RRAS2 chr11 14380309 - FHIT chr3 59738047 - Exonic hg19 PRAD TCGA-KK-A7B3 18 156 In-Frame Inter-chr p15.2 p14.2 Tumor suppressor gene Seq+ 43384 ChimerSeq STARFusion TCGA_RNA-Seq ATAD1-CTSLP1 ATAD1 chr10 89527430 - CTSLP1 chr10 89148902 - Exonic hg19 PRAD TCGA-KK-A7B3 6 105 Out-of-frame Intra-chr q23.2 43385 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-BRI3BP MDM2 chr12 69216191 + BRI3BP chr12 125509884 + Exonic hg19 PRAD TCGA-KK-A7B2 10 101 Out-of-frame Intra-chr q15 Oncogene q24.31 Seq+ 43386 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-BRI3BP MDM2 chr12 69214154 + BRI3BP chr12 125509890 + Exonic hg19 PRAD TCGA-KK-A7B2 6 98 In-Frame Intra-chr q15 Oncogene q24.31 Seq+ 43387 ChimerSeq STARFusion TCGA_RNA-Seq SCAF1-CD37 SCAF1 chr19 50145499 + CD37 chr19 49832085 + Exonic hg19 PRAD TCGA-EJ-7330 9 4 5'UTR-5'UTR Intra-chr q13.33 q13.33 43388 ChimerSeq STARFusion TCGA_RNA-Seq COL11A1-DPH5 COL11A1 chr1 103352466 - DPH5 chr1 101491617 - Exonic hg19 PRAD TCGA-EJ-7330 4 20 Out-of-frame Intra-chr p21.1 p21.2 Seq+ 43389 ChimerSeq STARFusion TCGA_RNA-Seq ATP8B4-OCA2 ATP8B4 chr15 50168475 - OCA2 chr15 28327041 - Exonic hg19 PRAD TCGA-EJ-7330 4 9 CDS-5'UTR Intra-chr q21.2 q13.1 Seq+ 43390 ChimerSeq STARFusion TCGA_RNA-Seq SP3-SLC8A1 SP3 chr2 174819601 - SLC8A1 chr2 40342769 - Exonic hg19 PRAD TCGA-ZG-A9MC 7 29 In-Frame Intra-chr q31.1 Transcription factor p22.1 Seq+ 43391 ChimerSeq STARFusion TCGA_RNA-Seq GOLM1-ZCCHC6 GOLM1 chr9 88648197 - ZCCHC6 chr9 88903659 - Exonic hg19 PRAD TCGA-EJ-A6RA 3 5 In-Frame Intra-chr q21.33 q21.33 Seq+ 43392 ChimerSeq STARFusion TCGA_RNA-Seq LRRC7-RRP15 LRRC7 chr1 70034324 + RRP15 chr1 218504290 + Exonic hg19 PRAD TCGA-HC-8257 9 21 5'UTR-CDS Intra-chr p31.1 q41 Seq+ 43393 ChimerSeq STARFusion TCGA_RNA-Seq DYNLRB1-CNBD2 DYNLRB1 chr20 33114148 + CNBD2 chr20 34596219 + Exonic hg19 PRAD TCGA-HC-8257 3 15 Out-of-frame Intra-chr q11.22 q11.23 Seq+ 43394 ChimerSeq STARFusion TCGA_RNA-Seq SLC30A4-PHF20 SLC30A4 chr15 45803336 - PHF20 chr20 34515702 + Exonic hg19 PRAD TCGA-HC-8257 2 14 Out-of-frame Inter-chr q21.1 q11.22 Transcription factor 43395 ChimerSeq STARFusion TCGA_RNA-Seq PAPD7-RAF1 PAPD7 chr5 6751310 + RAF1 chr3 12641307 - Exonic hg19 PRAD TCGA-HC-8256 12 34 In-Frame Inter-chr p15.31 p25.2 TKL:RAF Oncogene Seq+ 43396 ChimerSeq STARFusion TCGA_RNA-Seq RAF1-PHC3 RAF1 chr3 12641190 - PHC3 chr3 169815172 - Exonic hg19 PRAD TCGA-HC-8256 7 22 In-Frame Intra-chr p25.2 TKL:RAF Oncogene q26.2 Tumor suppressor gene Seq+ 43397 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-THEMIS PTPRK chr6 128385903 - THEMIS chr6 128040968 - Exonic hg19 PRAD TCGA-M7-A721 3 8 Out-of-frame Intra-chr Tumor suppressor gene Seq+ 43398 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880008 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-M7-A725 195 296 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 43399 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880008 - ETV4 chr17 41622738 - Exonic hg19 PRAD TCGA-M7-A725 36 288 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 43400 ChimerSeq STARFusion TCGA_RNA-Seq C21orf2-UMODL1 C21orf2 chr21 45759001 - UMODL1 chr21 43562206 + Exonic hg19 PRAD TCGA-M7-A725 19 79 CDS-3'UTR Intra-chr q22.3 q22.3 Seq+ 43401 ChimerSeq STARFusion TCGA_RNA-Seq BBS4-CSNK1G1 BBS4 chr15 73028307 + CSNK1G1 chr15 64472653 - Exonic hg19 PRAD TCGA-M7-A725 8 68 In-Frame Intra-chr q24.1 q22.31 Seq+ 43402 ChimerSeq STARFusion TCGA_RNA-Seq C21orf2-UMODL1 C21orf2 chr21 45759005 - UMODL1 chr21 43562206 + Exonic hg19 PRAD TCGA-M7-A725 3 79 CDS-3'UTR Intra-chr q22.3 q22.3 Seq+ 43403 ChimerSeq STARFusion TCGA_RNA-Seq SLC4A4-ARHGAP6 SLC4A4 chr4 72263370 + ARHGAP6 chrX 11272827 - Exonic hg19 PRAD TCGA-M7-A725 9 20 In-Frame Inter-chr q13.3 p22.2 Seq+ 43404 ChimerSeq STARFusion TCGA_RNA-Seq RNF170-CRYBB1 RNF170 chr8 42729074 - CRYBB1 chr22 27012302 - Exonic hg19 PRAD TCGA-M7-A725 4 29 5'UTR-5'UTR Inter-chr p11.21 q12.1 Seq+ 43405 ChimerSeq STARFusion TCGA_RNA-Seq RNF170-CRYBB1 RNF170 chr8 42742871 - CRYBB1 chr22 27012302 - Exonic hg19 PRAD TCGA-M7-A725 2 28 CDS-5'UTR Inter-chr p11.21 q12.1 Seq+ 43406 ChimerSeq STARFusion TCGA_RNA-Seq TYW1B-BAZ1B TYW1B chr7 72159677 - BAZ1B chr7 72892899 - Exonic hg19 PRAD TCGA-M7-A725 3 15 In-Frame Intra-chr q11.23 q11.23 Seq+ 43407 ChimerSeq STARFusion TCGA_RNA-Seq GULP1-TFPI GULP1 chr2 189393922 + TFPI chr2 188394212 - Exonic hg19 PRAD TCGA-M7-A724 7 15 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 43408 ChimerSeq STARFusion TCGA_RNA-Seq FBXL5-RAB28 FBXL5 chr4 15656827 - RAB28 chr4 13481150 - Exonic hg19 PRAD TCGA-M7-A724 3 22 In-Frame Intra-chr p15.32 p15.33 Seq+ 43409 ChimerSeq STARFusion TCGA_RNA-Seq NFATC3-SPATA33 NFATC3 chr16 68225678 + SPATA33 chr16 89735694 + Exonic hg19 PRAD TCGA-M7-A724 4 7 Out-of-frame Intra-chr q22.1 Transcription factor q24.3 Seq+ 43410 ChimerSeq STARFusion TCGA_RNA-Seq RAB3GAP1-ARHGAP15 RAB3GAP1 chr2 135893502 + ARHGAP15 chr2 143913046 + Exonic hg19 PRAD TCGA-M7-A724 4 6 CDS-5'UTR Intra-chr q21.3 q22.2 Seq+ 43411 ChimerSeq STARFusion TCGA_RNA-Seq SLC15A4-TMEM132D SLC15A4 chr12 129299320 - TMEM132D chr12 130185243 - Exonic hg19 PRAD TCGA-M7-A724 3 5 Out-of-frame Intra-chr q24.33 q24.33 Seq+ 43412 ChimerSeq STARFusion TCGA_RNA-Seq CXADR-HERC1 CXADR chr21 18937929 + HERC1 chr15 63908881 - Exonic hg19 PRAD TCGA-ZG-A9M4 6 15 Out-of-frame Inter-chr q21.1 q22.31 Seq+ 43413 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC14-IMPA2 ZCCHC14 chr16 87493614 - IMPA2 chr18 11999053 + Exonic hg19 PRAD TCGA-ZG-A9M4 3 7 Out-of-frame Inter-chr q24.2 p11.21 Seq+ 43414 ChimerSeq STARFusion TCGA_RNA-Seq LDLRAD4-CD226 LDLRAD4 chr18 13438383 + CD226 chr18 67540482 - Exonic hg19 PRAD TCGA-ZG-A9M4 2 9 Out-of-frame Intra-chr p11.21 q22.2 Seq+ 43415 ChimerSeq STARFusion TCGA_RNA-Seq MLLT4-EXOC6B MLLT4 chr6 168303066 + EXOC6B chr2 72802797 - Exonic hg19 PRAD TCGA-EJ-A7NF 2 8 In-Frame Inter-chr p13.2 Seq+ 43416 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-AES FGFR3 chr4 1808661 + AES chr19 3061255 - Exonic hg19 PRAD TCGA-EJ-A7NM 238 496 In-Frame Inter-chr p16.3 TK:FGFR Oncogene p13.3 Seq+ 43417 ChimerSeq STARFusion TCGA_RNA-Seq SLC37A3-FLYWCH2 SLC37A3 chr7 140043212 - FLYWCH2 chr16 2945221 + Exonic hg19 PRAD TCGA-EJ-A7NN 16 35 CDS-5'UTR Inter-chr q34 p13.3 Seq+ 43418 ChimerSeq STARFusion TCGA_RNA-Seq SUFU-CYP26A1 SUFU chr10 104377185 + CYP26A1 chr10 94834065 + Exonic hg19 PRAD TCGA-EJ-A7NN 2 24 In-Frame Intra-chr q24.32 Oncogene Tumor suppressor gene q23.33 Seq+ 43419 ChimerSeq STARFusion TCGA_RNA-Seq SUFU-CYP26A1 SUFU chr10 104377185 + CYP26A1 chr10 94835583 + Exonic hg19 PRAD TCGA-EJ-A7NN 2 24 In-Frame Intra-chr q24.32 Oncogene Tumor suppressor gene q23.33 Seq+ 43420 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-CALB1 TMPRSS2 chr21 42848504 - CALB1 chr8 91072928 - Exonic hg19 PRAD TCGA-EJ-A7NN 2 8 Out-of-frame Inter-chr q22.3 q21.3 Seq+ 43421 ChimerSeq STARFusion TCGA_RNA-Seq DIRC2-DDT DIRC2 chr3 122525797 + DDT chr22 24313812 - Exonic hg19 PRAD TCGA-EJ-A7NH 4 30 In-Frame Inter-chr q21.1 Seq+ 43422 ChimerSeq STARFusion TCGA_RNA-Seq DDT-ACPP DDT chr22 24315957 - ACPP chr3 132075530 + Exonic hg19 PRAD TCGA-EJ-A7NH 2 13 In-Frame Inter-chr q22.1 Seq+ 43423 ChimerSeq STARFusion TCGA_RNA-Seq DDTL-ACPP DDTL chr22 24309749 + ACPP chr3 132075530 + Exonic hg19 PRAD TCGA-EJ-A7NH 2 13 In-Frame Inter-chr q22.1 43424 ChimerSeq STARFusion TCGA_RNA-Seq INADL-SGIP1 INADL chr1 62274202 + SGIP1 chr1 67091530 + Exonic hg19 PRAD TCGA-EJ-A7NK 5 2 Out-of-frame Intra-chr p31.3 43425 ChimerSeq STARFusion TCGA_RNA-Seq AMD1-MBOAT2 AMD1 chr6 111210186 + MBOAT2 chr2 9004364 - Exonic hg19 PRAD TCGA-EJ-A7NK 2 10 In-Frame Inter-chr q21 p25.1 Seq+ 43426 ChimerSeq STARFusion TCGA_RNA-Seq LNPEP-PPIP5K2 LNPEP chr5 96322374 + PPIP5K2 chr5 102537223 + Exonic hg19 PRAD TCGA-XK-AAJ3 23 35 Out-of-frame Intra-chr q15 q21.1 Seq+ 43427 ChimerSeq STARFusion TCGA_RNA-Seq FGD4-MRPS35 FGD4 chr12 32552893 + MRPS35 chr12 27867713 + Exonic hg19 PRAD TCGA-XK-AAJ3 10 14 5'UTR-CDS Intra-chr p11.21 p11.22 Seq+ 43428 ChimerSeq STARFusion TCGA_RNA-Seq FOXA1-MIPOL1 FOXA1 chr14 38060605 - MIPOL1 chr14 37969113 + Exonic hg19 PRAD TCGA-XK-AAJ3 8 9 Out-of-frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q13.3 Seq+ 43429 ChimerSeq STARFusion TCGA_RNA-Seq FGD4-MRPS35 FGD4 chr12 32552893 + MRPS35 chr12 27908114 + Exonic hg19 PRAD TCGA-XK-AAJ3 2 14 5'UTR-CDS Intra-chr p11.21 p11.22 Seq+ 43430 ChimerSeq STARFusion TCGA_RNA-Seq HBP1-ATXN7L1 HBP1 chr7 106809472 + ATXN7L1 chr7 105401909 - Exonic hg19 PRAD TCGA-H9-7775 2 9 Out-of-frame Intra-chr Tumor suppressor gene Transcription factor q22.3 Seq+ 43431 ChimerSeq STARFusion TCGA_RNA-Seq SORBS2-MRPS35 SORBS2 chr4 186570621 - MRPS35 chr12 27908114 + Exonic hg19 PRAD TCGA-4L-AA1F 21 62 Out-of-frame Inter-chr q35.1 p11.22 Seq+ 43432 ChimerSeq STARFusion TCGA_RNA-Seq ACPP-BCRP1 ACPP chr3 132056398 + BCRP1 chr22 24659730 - Exonic hg19 PRAD TCGA-4L-AA1F 11 59 Out-of-frame Inter-chr q22.1 q11.23 Tumor suppressor gene 43433 ChimerSeq STARFusion TCGA_RNA-Seq SORBS2-MRPS35 SORBS2 chr4 186568286 - MRPS35 chr12 27908114 + Exonic hg19 PRAD TCGA-4L-AA1F 4 62 CDS-3'UTR Inter-chr q35.1 p11.22 Seq+ 43434 ChimerSeq STARFusion TCGA_RNA-Seq SPECC1L-CPNE4 SPECC1L chr22 24666951 + CPNE4 chr3 132003014 - Exonic hg19 PRAD TCGA-4L-AA1F 6 47 5'UTR-5'UTR Inter-chr q11.23 q22.1 Seq+ 43435 ChimerSeq STARFusion TCGA_RNA-Seq ACPP-BCRP1 ACPP chr3 132051188 + BCRP1 chr22 24659730 - Exonic hg19 PRAD TCGA-4L-AA1F 6 39 Out-of-frame Inter-chr q22.1 q11.23 Tumor suppressor gene 43436 ChimerSeq STARFusion TCGA_RNA-Seq SPECC1L-CPNE4 SPECC1L chr22 24666951 + CPNE4 chr3 131759165 - Exonic hg19 PRAD TCGA-4L-AA1F 4 47 5'UTR-5'UTR Inter-chr q11.23 q22.1 Seq+ 43437 ChimerSeq STARFusion TCGA_RNA-Seq SLC9A9-PDLIM3 SLC9A9 chr3 143513843 - PDLIM3 chr4 186427806 - Exonic hg19 PRAD TCGA-4L-AA1F 7 20 In-Frame Inter-chr q24 q35.1 Seq+ 43438 ChimerSeq STARFusion TCGA_RNA-Seq ACPP-ATP2C1 ACPP chr3 132036420 + ATP2C1 chr3 130649260 + Exonic hg19 PRAD TCGA-V1-A9O9 89 338 In-Frame Intra-chr q22.1 q22.1 Seq+ 43439 ChimerSeq STARFusion TCGA_RNA-Seq PIGR-IGKC PIGR chr1 207108842 - IGKC chr2 89157198 - Exonic hg19 PRAD TCGA-V1-A9O9 66 2 Out-of-frame Inter-chr q32.1 p11.2 43440 ChimerSeq STARFusion TCGA_RNA-Seq TMTC3-ACSS3 TMTC3 chr12 88536264 + ACSS3 chr12 81647086 + Exonic hg19 PRAD TCGA-V1-A9O9 16 37 5'UTR-CDS Intra-chr q21.32 q21.31 Seq+ 43441 ChimerSeq STARFusion TCGA_RNA-Seq NSF-NMT1 NSF chr17 44668153 + NMT1 chr17 43176773 + Exonic hg19 PRAD TCGA-V1-A9O9 14 5 Out-of-frame Intra-chr q21.31 43442 ChimerSeq STARFusion TCGA_RNA-Seq KIF13B-CSGALNACT1 KIF13B chr8 28965656 - CSGALNACT1 chr8 19266205 - Exonic hg19 PRAD TCGA-V1-A9O9 7 23 In-Frame Intra-chr p12 p21.3 Seq+ 43443 ChimerSeq STARFusion TCGA_RNA-Seq BLOC1S6-SCMH1 BLOC1S6 chr15 45884474 + SCMH1 chr1 41514562 - Exonic hg19 PRAD TCGA-V1-A9O9 7 22 Out-of-frame Inter-chr q21.1 p34.2 Transcription factor Seq+ 43444 ChimerSeq STARFusion TCGA_RNA-Seq HMGN2P46-EBNA1BP2 HMGN2P46 chr15 45828407 + EBNA1BP2 chr1 43640716 - Exonic hg19 PRAD TCGA-V1-A9O9 3 33 5'UTR-5'UTR Inter-chr q21.1 p34.2 Seq+ 43445 ChimerSeq STARFusion TCGA_RNA-Seq HMGN2P46-EBNA1BP2 HMGN2P46 chr15 45828407 + EBNA1BP2 chr1 43638534 - Exonic hg19 PRAD TCGA-V1-A9O9 3 33 5'UTR-5'UTR Inter-chr q21.1 p34.2 Seq+ 43446 ChimerSeq STARFusion TCGA_RNA-Seq NSF-NMT1 NSF chr17 44668153 + NMT1 chr17 43180319 + Exonic hg19 PRAD TCGA-V1-A9O9 10 5 In-Frame Intra-chr q21.31 43447 ChimerSeq STARFusion TCGA_RNA-Seq SCAF8-GREB1 SCAF8 chr6 155148374 + GREB1 chr2 11770074 + Exonic hg19 PRAD TCGA-V1-A9O9 9 9 Out-of-frame Inter-chr q25.2 p25.1 Seq+ 43448 ChimerSeq STARFusion TCGA_RNA-Seq HMGN2P46-EBNA1BP2 HMGN2P46 chr15 45813223 + EBNA1BP2 chr1 43638534 - Exonic hg19 PRAD TCGA-V1-A9O9 2 33 Out-of-frame Inter-chr q21.1 p34.2 Seq+ 43449 ChimerSeq STARFusion TCGA_RNA-Seq SCMH1-SQRDL SCMH1 chr1 41536267 - SQRDL chr15 45951105 + Exonic hg19 PRAD TCGA-V1-A9O9 4 20 CDS-5'UTR Inter-chr p34.2 Transcription factor Seq+ 43450 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ANTXR2 IGH@ chr14 106641562 - ANTXR2 chr4 80993926 - Exonic hg19 PRAD TCGA-V1-A9O9 8 1 Out-of-frame Inter-chr 32.33 q21.21 43451 ChimerSeq STARFusion TCGA_RNA-Seq BLOC1S6-SCMH1 BLOC1S6 chr15 45879723 + SCMH1 chr1 41514562 - Exonic hg19 PRAD TCGA-V1-A9O9 2 22 Out-of-frame Inter-chr q21.1 p34.2 Transcription factor Seq+ 43452 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-NSF KANSL1 chr17 44248221 - NSF chr17 44701610 + Exonic hg19 PRAD TCGA-V1-A9O9 5 7 Out-of-frame Intra-chr 43453 ChimerSeq STARFusion TCGA_RNA-Seq ATP2C1-CPNE4 ATP2C1 chr3 130675023 + CPNE4 chr3 131759165 - Exonic hg19 PRAD TCGA-V1-A9O9 2 12 CDS-5'UTR Intra-chr q22.1 q22.1 Seq+ 43454 ChimerSeq STARFusion TCGA_RNA-Seq SETD5-GADL1 SETD5 chr3 9439661 + GADL1 chr3 30898633 - Exonic hg19 PRAD TCGA-ZG-A8QZ 23 47 5'UTR-CDS Intra-chr p25.3 p23 Seq+ 43455 ChimerSeq STARFusion TCGA_RNA-Seq DYNLT1-DUSP15 DYNLT1 chr6 159062351 - DUSP15 chr20 30457400 - Exonic hg19 PRAD TCGA-ZG-A8QZ 5 38 In-Frame Inter-chr q25.3 q11.21 Seq+ 43456 ChimerSeq STARFusion TCGA_RNA-Seq DOCK4-IMMP2L DOCK4 chr7 111846157 - IMMP2L chr7 111127397 - Exonic hg19 PRAD TCGA-ZG-A8QZ 5 27 Out-of-frame Intra-chr q31.1 q31.1 KB Pub Seq+ 43457 ChimerSeq STARFusion TCGA_RNA-Seq DHRS12-TSC22D1 DHRS12 chr13 52378190 - TSC22D1 chr13 45010231 - Exonic hg19 PRAD TCGA-ZG-A8QZ 3 10 5'UTR-5'UTR Intra-chr q14.3 q14.11 Tumor suppressor gene Transcription factor Seq+ 43458 ChimerSeq STARFusion TCGA_RNA-Seq ORC5-R3HDM2 ORC5 chr7 103835591 - R3HDM2 chr12 57789601 - Exonic hg19 PRAD TCGA-ZG-A8QZ 3 8 CDS-5'UTR Inter-chr q22.2 q13.3 Seq+ 43459 ChimerSeq STARFusion TCGA_RNA-Seq TSC22D1-CCDC122 TSC22D1 chr13 45147299 - CCDC122 chr13 44449063 - Exonic hg19 PRAD TCGA-ZG-A8QZ 3 8 CDS-5'UTR Intra-chr q14.11 Tumor suppressor gene Transcription factor q14.11 Seq+ 43460 ChimerSeq STARFusion TCGA_RNA-Seq SYNJ2-KIF25 SYNJ2 chr6 158403120 + KIF25 chr6 168439233 + Exonic hg19 PRAD TCGA-ZG-A8QZ 2 9 Out-of-frame Intra-chr q25.3 q27 Seq+ 43461 ChimerSeq STARFusion TCGA_RNA-Seq ORC5-R3HDM2 ORC5 chr7 103838173 - R3HDM2 chr12 57789601 - Exonic hg19 PRAD TCGA-ZG-A8QZ 2 8 CDS-5'UTR Inter-chr q22.2 q13.3 Seq+ 43462 ChimerSeq STARFusion TCGA_RNA-Seq RASA1-FAM174A RASA1 chr5 86649052 + FAM174A chr5 99897758 + Exonic hg19 PRAD TCGA-ZG-A8QX 8 20 Out-of-frame Intra-chr q14.3 q21.1 Seq+ 43463 ChimerSeq STARFusion TCGA_RNA-Seq GRB10-ZPBP GRB10 chr7 50799969 - ZPBP chr7 49977218 - Exonic hg19 PRAD TCGA-ZG-A8QX 5 22 Out-of-frame Intra-chr p12.1 p12.2 Seq+ 43464 ChimerSeq STARFusion TCGA_RNA-Seq NFIC-CELF5 NFIC chr19 3366664 + CELF5 chr19 3273870 + Exonic hg19 PRAD TCGA-ZG-A8QY 14 22 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 43465 ChimerSeq STARFusion TCGA_RNA-Seq NFIC-CELF5 NFIC chr19 3359683 + CELF5 chr19 3273870 + Exonic hg19 PRAD TCGA-ZG-A8QY 7 22 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 43466 ChimerSeq STARFusion TCGA_RNA-Seq CYB561D2-ERC2 CYB561D2 chr3 50388413 + ERC2 chr3 56053061 - Exonic hg19 PRAD TCGA-ZG-A8QY 5 25 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p14.3 Seq+ 43467 ChimerSeq STARFusion TCGA_RNA-Seq CYB561D2-ERC2 CYB561D2 chr3 50388415 + ERC2 chr3 56053059 - Exonic hg19 PRAD TCGA-ZG-A8QY 2 25 5'UTR-CDS Intra-chr p21.31 Tumor suppressor gene p14.3 Seq+ 43468 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38075947 + MIPOL1 chr14 37969113 + Exonic hg19 PRAD TCGA-ZG-A8QW 12 28 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 43469 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38065213 + MIPOL1 chr14 37969113 + Exonic hg19 PRAD TCGA-ZG-A8QW 2 28 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 43470 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-TNFRSF19 PVT1 chr8 128903244 + TNFRSF19 chr13 24242119 + Exonic hg19 PRAD TCGA-ZG-A8QW 3 10 5'UTR-CDS Inter-chr q24.21 q12.12 Seq+ 43471 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649522 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-YL-A9WX 4 15 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 43472 ChimerSeq STARFusion TCGA_RNA-Seq CTBP2-FGFR2 CTBP2 chr10 126848888 - FGFR2 chr10 123353481 - Exonic hg19 PRAD TCGA-CH-5772 3 1 5'UTR-5'UTR Intra-chr q26.13 q26.13 TK:FGFR Oncogene 43473 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK4-BUB1B EIF2AK4 chr15 40309443 + BUB1B chr15 40504700 + Exonic hg19 PRAD TCGA-CH-5771 24 166 In-Frame Intra-chr q15.1 q15.1 Oncogene Seq+ 43474 ChimerSeq STARFusion TCGA_RNA-Seq SERINC5-TTC39A SERINC5 chr5 79462206 - TTC39A chr1 51787497 - Exonic hg19 PRAD TCGA-CH-5771 13 97 Out-of-frame Inter-chr q14.1 p32.3 Seq+ 43475 ChimerSeq STARFusion TCGA_RNA-Seq TTC39A-CDC42 TTC39A chr1 51796109 - CDC42 chr1 22404922 + Exonic hg19 PRAD TCGA-CH-5771 9 8 5'UTR-5'UTR Intra-chr p32.3 p36.12 Seq+ 43476 ChimerSeq STARFusion TCGA_RNA-Seq METTL13-EIF4G3 METTL13 chr1 171753639 + EIF4G3 chr1 21231464 - Exonic hg19 PRAD TCGA-CH-5771 2 23 In-Frame Intra-chr q24.3 p36.12 Seq+ 43477 ChimerSeq STARFusion TCGA_RNA-Seq EEF1A1-SEMG1 EEF1A1 chr6 74229627 - SEMG1 chr20 43835736 + Exonic hg19 PRAD TCGA-HC-7747 3 407 Out-of-frame Inter-chr q13 Tumor suppressor gene q13.12 43478 ChimerSeq STARFusion TCGA_RNA-Seq CDYL2-VEPH1 CDYL2 chr16 80838047 - VEPH1 chr3 157082301 - Exonic hg19 PRAD TCGA-HC-7744 28 93 Out-of-frame Inter-chr q23.2 q25.32 Seq+ 43479 ChimerSeq STARFusion TCGA_RNA-Seq TTC21B-SLC38A11 TTC21B chr2 166810195 - SLC38A11 chr2 165802237 - Exonic hg19 PRAD TCGA-HC-7744 6 73 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 43480 ChimerSeq STARFusion TCGA_RNA-Seq TTC21B-SLC38A11 TTC21B chr2 166810195 - SLC38A11 chr2 165796066 - Exonic hg19 PRAD TCGA-HC-7744 2 73 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 43481 ChimerSeq STARFusion TCGA_RNA-Seq MINPP1-LIPJ MINPP1 chr10 89280926 + LIPJ chr10 90365390 + Exonic hg19 PRAD TCGA-HC-7744 9 15 Out-of-frame Intra-chr q23.2 q23.31 Seq+ 43482 ChimerSeq STARFusion TCGA_RNA-Seq AAK1-KCMF1 AAK1 chr2 69870010 - KCMF1 chr2 85255012 + Exonic hg19 PRAD TCGA-HC-7744 5 20 In-Frame Intra-chr p13.3 Other:NAK p11.2 Transcription factor Seq+ 43483 ChimerSeq STARFusion TCGA_RNA-Seq ZNF395-SLC25A44 ZNF395 chr8 28243521 - SLC25A44 chr1 156180031 + Exonic hg19 PRAD TCGA-HC-7744 5 18 5'UTR-CDS Inter-chr p21.1 Transcription factor q22 Seq+ 43484 ChimerSeq STARFusion TCGA_RNA-Seq ZNF395-SLC25A44 ZNF395 chr8 28243521 - SLC25A44 chr1 156177677 + Exonic hg19 PRAD TCGA-HC-7744 5 16 5'UTR-CDS Inter-chr p21.1 Transcription factor q22 Seq+ 43485 ChimerSeq STARFusion TCGA_RNA-Seq KLK3-TMPRSS11A KLK3 chr19 51361851 + TMPRSS11A chr4 68777221 - Exonic hg19 PRAD TCGA-HC-7742 30 0 In-Frame Inter-chr q13.33 q13.2 Tumor suppressor gene 43486 ChimerSeq STARFusion TCGA_RNA-Seq PNPLA7-DPH7 PNPLA7 chr9 140409831 - DPH7 chr9 140450100 - Exonic hg19 PRAD TCGA-HC-7740 22 74 Out-of-frame Intra-chr q34.3 q34.3 43487 ChimerSeq STARFusion TCGA_RNA-Seq COLEC12-ORM1 COLEC12 chr18 346771 - ORM1 chr9 117085939 + Exonic hg19 PRAD TCGA-HC-7740 30 1 Out-of-frame Inter-chr p11.32 q32 Seq+ 43488 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KC1-VASH2 RPS6KC1 chr1 213349835 + VASH2 chr1 213161854 + Exonic hg19 PRAD TCGA-FC-7961 2 26 Out-of-frame Intra-chr q32.3 q32.3 Seq+ 43489 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649522 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-HC-7748 89 593 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 43490 ChimerSeq STARFusion TCGA_RNA-Seq GTPBP4-KLK3 GTPBP4 chr10 1063879 + KLK3 chr19 51363227 + Exonic hg19 PRAD TCGA-HC-7748 55 1 Out-of-frame Inter-chr p15.3 Tumor suppressor gene q13.33 43491 ChimerSeq STARFusion TCGA_RNA-Seq CTBP2-METTL10 CTBP2 chr10 126727566 - METTL10 chr10 126463351 - Exonic hg19 PRAD TCGA-HC-7748 21 76 Out-of-frame Intra-chr q26.13 Seq+ 43492 ChimerSeq STARFusion TCGA_RNA-Seq PTEN-HECTD2 PTEN chr10 89653866 + HECTD2 chr10 93244264 + Exonic hg19 PRAD TCGA-HC-7748 7 57 In-Frame Intra-chr q23.31 Oncogene Tumor suppressor gene q23.32 Seq+ 43493 ChimerSeq STARFusion TCGA_RNA-Seq TOR1A-COG4 TOR1A chr9 132576362 - COG4 chr16 70524295 - Exonic hg19 PRAD TCGA-HC-7748 5 21 Out-of-frame Inter-chr q34.11 q22.1 Seq+ 43494 ChimerSeq STARFusion TCGA_RNA-Seq SORBS2-ARHGAP27 SORBS2 chr4 186877350 - ARHGAP27 chr17 43475413 - Exonic hg19 PRAD TCGA-HC-7748 3 18 5'UTR-CDS Inter-chr q35.1 Seq+ 43495 ChimerSeq STARFusion TCGA_RNA-Seq CCDC120-ERAS CCDC120 chrX 48916626 + ERAS chrX 48687491 + Exonic hg19 PRAD TCGA-HC-7749 7 52 5'UTR-5'UTR Intra-chr p11.23 p11.23 Seq+ 43496 ChimerSeq STARFusion TCGA_RNA-Seq CCDC120-ERAS CCDC120 chrX 48916590 + ERAS chrX 48687491 + Exonic hg19 PRAD TCGA-HC-7749 3 52 5'UTR-5'UTR Intra-chr p11.23 p11.23 Seq+ 43497 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 PRAD TCGA-HC-7749 10 9 In-Frame Intra-chr p13.3 p13.3 43498 ChimerSeq STARFusion TCGA_RNA-Seq NPAT-SLN NPAT chr11 108093227 - SLN chr11 107582888 - Exonic hg19 PRAD TCGA-HC-8261 3 108 CDS-5'UTR Intra-chr q22.3 q22.3 Seq+ 43499 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38092208 + MIPOL1 chr14 38016110 + Exonic hg19 PRAD TCGA-HC-8261 9 49 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 43500 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38075947 + MIPOL1 chr14 38016110 + Exonic hg19 PRAD TCGA-HC-8261 4 49 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 43501 ChimerSeq STARFusion TCGA_RNA-Seq SHOC2-TMEM178A SHOC2 chr10 112679415 + TMEM178A chr2 39931221 + Exonic hg19 PRAD TCGA-HC-8262 93 22 Out-of-frame Inter-chr q25.2 p22.1 Seq+ 43502 ChimerSeq STARFusion TCGA_RNA-Seq CCT3-GON4L CCT3 chr1 156303338 - GON4L chr1 155802741 - Exonic hg19 PRAD TCGA-HC-8262 6 32 3'UTR-CDS Intra-chr q22 q22 Seq+ 43503 ChimerSeq STARFusion TCGA_RNA-Seq CCT3-GON4L CCT3 chr1 156303338 - GON4L chr1 155804195 - Exonic hg19 PRAD TCGA-HC-8262 4 32 3'UTR-CDS Intra-chr q22 q22 Seq+ 43504 ChimerSeq STARFusion TCGA_RNA-Seq MYO6-NEGR1 MYO6 chr6 76558248 + NEGR1 chr1 72163822 - Exonic hg19 PRAD TCGA-HC-8262 4 13 In-Frame Inter-chr q14.1 p31.1 Seq+ 43505 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHH2-VSNL1 PLEKHH2 chr2 43871935 + VSNL1 chr2 17773337 + Exonic hg19 PRAD TCGA-HC-8262 2 10 CDS-5'UTR Intra-chr p21 p24.2 Tumor suppressor gene Seq+ 43506 ChimerSeq STARFusion TCGA_RNA-Seq CD63-PKP2 CD63 chr12 56119354 - PKP2 chr12 32955490 - Exonic hg19 PRAD TCGA-HC-8264 42 223 Out-of-frame Intra-chr q13.2 p11.21 Seq+ 43507 ChimerSeq STARFusion TCGA_RNA-Seq LCA5-HMGN3 LCA5 chr6 80222929 - HMGN3 chr6 79924739 - Exonic hg19 PRAD TCGA-HC-8264 3 14 In-Frame Intra-chr q14.1 q14.1 Transcription factor 43508 ChimerSeq STARFusion TCGA_RNA-Seq PKP2-SARNP PKP2 chr12 32955337 - SARNP chr12 56151337 - Exonic hg19 PRAD TCGA-HC-8264 2 8 Out-of-frame Intra-chr p11.21 q13.2 Seq+ 43509 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC1-SPINK8 SMARCC1 chr3 47777524 - SPINK8 chr3 48351436 - Exonic hg19 PRAD TCGA-HC-8265 64 376 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 43510 ChimerSeq STARFusion TCGA_RNA-Seq BAZ1B-POMZP3 BAZ1B chr7 72873866 - POMZP3 chr7 76241130 - Exonic hg19 PRAD TCGA-HC-8265 41 160 In-Frame Intra-chr q11.23 Seq+ 43511 ChimerSeq STARFusion TCGA_RNA-Seq GABRG3-SNHG14 GABRG3 chr15 27271968 + SNHG14 chr15 25583158 + Exonic hg19 PRAD TCGA-HC-8265 7 38 Out-of-frame Intra-chr q12 q11.2 Seq+ 43512 ChimerSeq STARFusion TCGA_RNA-Seq MNAT1-SMARCB1 MNAT1 chr14 61305317 + SMARCB1 chr22 24175759 + Exonic hg19 PRAD TCGA-HC-8265 3 33 Out-of-frame Inter-chr q23.1 q11.23 Oncogene Tumor suppressor gene 43513 ChimerSeq STARFusion TCGA_RNA-Seq SPEN-TNFRSF1B SPEN chr1 16242774 + TNFRSF1B chr1 12262024 + Exonic hg19 PRAD TCGA-HC-8265 3 29 In-Frame Intra-chr p36.21 Transcription factor p36.22 Seq+ 43514 ChimerSeq STARFusion TCGA_RNA-Seq ST14-APLP2 ST14 chr11 130029955 + APLP2 chr11 129979324 + Exonic hg19 PRAD TCGA-HC-8265 6 12 In-Frame Intra-chr q24.3 q24.3 Seq+ 43515 ChimerSeq STARFusion TCGA_RNA-Seq RERE-ENO1 RERE chr1 8763117 - ENO1 chr1 8934979 - Exonic hg19 PRAD TCGA-HC-8265 4 14 Out-of-frame Intra-chr p36.23 p36.23 Seq+ 43516 ChimerSeq STARFusion TCGA_RNA-Seq RERE-ENO1 RERE chr1 8763114 - ENO1 chr1 8934976 - Exonic hg19 PRAD TCGA-HC-8265 3 13 5'UTR-5'UTR Intra-chr p36.23 p36.23 Seq+ 43517 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-RASSF3 FRS2 chr12 69864310 + RASSF3 chr12 65078567 + Exonic hg19 PRAD TCGA-HC-8265 2 14 5'UTR-5'UTR Intra-chr q15 q14.2 Tumor suppressor gene Seq+ 43518 ChimerSeq STARFusion TCGA_RNA-Seq RANBP3-MLLT1 RANBP3 chr19 5924838 - MLLT1 chr19 6270770 - Exonic hg19 PRAD TCGA-HC-8265 2 14 In-Frame Intra-chr p13.3 p13.3 Seq+ 43519 ChimerSeq STARFusion TCGA_RNA-Seq SS18-DOCK2 SS18 chr18 23612363 - DOCK2 chr5 169267761 + Exonic hg19 PRAD TCGA-HC-8265 2 13 In-Frame Inter-chr q11.2 q35.1 Seq+ 43520 ChimerSeq STARFusion TCGA_RNA-Seq KDM4B-HDGFRP2 KDM4B chr19 5077481 + HDGFRP2 chr19 4493700 + Exonic hg19 PRAD TCGA-HC-8265 2 12 In-Frame Intra-chr p13.3 43521 ChimerSeq STARFusion TCGA_RNA-Seq ELK4-SLC26A9 ELK4 chr1 205592804 - SLC26A9 chr1 205904966 - Exonic hg19 PRAD TCGA-HC-8265 3 5 CDS-5'UTR Intra-chr q32.1 Transcription factor q32.1 Seq+ 43522 ChimerSeq STARFusion TCGA_RNA-Seq PTPRA-PSMF1 PTPRA chr20 2969120 + PSMF1 chr20 1115764 + Exonic hg19 PRAD TCGA-HC-8265 2 5 Out-of-frame Intra-chr p13 p13 Seq+ 43523 ChimerSeq STARFusion TCGA_RNA-Seq MAK-INTS12 MAK chr6 10791908 - INTS12 chr4 106604474 - Exonic hg19 PRAD TCGA-HC-8266 3 16 Out-of-frame Inter-chr p24.2 CMGC:RCK q24 Seq+ 43524 ChimerSeq STARFusion TCGA_RNA-Seq KDM2B-SLC9A5 KDM2B chr12 122012452 - SLC9A5 chr16 67304641 + Exonic hg19 PRAD TCGA-HC-8266 4 9 In-Frame Inter-chr q24.31 Transcription factor q22.1 Seq+ 43525 ChimerSeq STARFusion TCGA_RNA-Seq PPP3CA-INTS12 PPP3CA chr4 102117073 - INTS12 chr4 106604474 - Exonic hg19 PRAD TCGA-HC-8266 2 11 Out-of-frame Intra-chr q24 q24 Seq+ 43526 ChimerSeq STARFusion TCGA_RNA-Seq PPP3CA-PPIL1 PPP3CA chr4 102267896 - PPIL1 chr6 36839648 - Exonic hg19 PRAD TCGA-HC-8266 2 6 Out-of-frame Inter-chr q24 p21.2 Seq+ 43527 ChimerSeq STARFusion TCGA_RNA-Seq OPN3-SLC39A11 OPN3 chr1 241803184 - SLC39A11 chr17 70944014 - Exonic hg19 PRAD TCGA-KC-A7F5 3 9 Out-of-frame Inter-chr q43 q25.1 Seq+ 43528 ChimerSeq STARFusion TCGA_RNA-Seq TTC6-PAX9 TTC6 chr14 38065213 + PAX9 chr14 37132102 + Exonic hg19 PRAD TCGA-KC-A7F5 2 6 Out-of-frame Intra-chr q21.1 q13.3 Transcription factor Seq+ 43529 ChimerSeq STARFusion TCGA_RNA-Seq CBX5-HNRNPA1 CBX5 chr12 54673792 - HNRNPA1 chr12 54680446 + Exonic hg19 PRAD TCGA-KC-A7F6 11 53 5'UTR-3'UTR Intra-chr q13.13 Tumor suppressor gene q13.13 Seq+ 43530 ChimerSeq STARFusion TCGA_RNA-Seq ADNP-SCCPDH ADNP chr20 49518554 - SCCPDH chr1 246899277 + Exonic hg19 PRAD TCGA-KC-A7F6 13 38 In-Frame Inter-chr q13.13 Transcription factor q44 Seq+ 43531 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPA1-SMUG1 HNRNPA1 chr12 54678101 + SMUG1 chr12 54577743 - Exonic hg19 PRAD TCGA-KC-A7F6 2 21 3'UTR-3'UTR Intra-chr q13.13 q13.13 Oncogene 43532 ChimerSeq STARFusion TCGA_RNA-Seq CDK12-APRT CDK12 chr17 37713311 + APRT chr16 88876556 - Exonic hg19 PRAD TCGA-KC-A7F6 3 6 3'UTR-CDS Inter-chr q12 Oncogene q24.3 Seq+ 43533 ChimerSeq STARFusion TCGA_RNA-Seq IQSEC1-SCCPDH IQSEC1 chr3 12953129 - SCCPDH chr1 246903474 + Exonic hg19 PRAD TCGA-KC-A7F6 2 7 Out-of-frame Inter-chr p25.2 q44 Seq+ 43534 ChimerSeq STARFusion TCGA_RNA-Seq CRIM1-VIT CRIM1 chr2 36583766 + VIT chr2 36982064 + Exonic hg19 PRAD TCGA-KC-A7F3 2 14 Out-of-frame Intra-chr p22.2 p22.2 Seq+ 43535 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H15-CPS1 ZC3H15 chr2 187351184 + CPS1 chr2 211454830 + Exonic hg19 PRAD TCGA-KC-A7F3 2 6 In-Frame Intra-chr q32.1 q34 Seq+ 43536 ChimerSeq STARFusion TCGA_RNA-Seq FUK-ABCB5 FUK chr16 70512553 + ABCB5 chr7 20778606 + Exonic hg19 PRAD TCGA-KK-A7AY 2 4 Out-of-frame Inter-chr q22.1 p21.1 Seq+ 43537 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-EIF3E PVT1 chr8 128806980 + EIF3E chr8 109215732 - Exonic hg19 PRAD TCGA-KK-A7AZ 131 511 5'UTR-CDS Intra-chr q24.21 q23.1 Seq+ 43538 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ETV5 TMPRSS2 chr21 42861434 - ETV5 chr3 185823731 - Exonic hg19 PRAD TCGA-KK-A7AZ 58 173 CDS-5'UTR Inter-chr q22.3 q27.2 Oncogene Transcription factor KB Pub Seq+ 43539 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-DGKG TMPRSS2 chr21 42861434 - DGKG chr3 185823731 - Exonic hg19 PRAD TCGA-KK-A7AZ 58 160 CDS-3'UTR Inter-chr q22.3 q27.3 Seq+ 43540 ChimerSeq STARFusion TCGA_RNA-Seq TRPM8-SLC4A4 TRPM8 chr2 234905160 + SLC4A4 chr4 72306333 + Exonic hg19 PRAD TCGA-KK-A7AZ 13 22 Out-of-frame Inter-chr q37.1 q13.3 Seq+ 43541 ChimerSeq STARFusion TCGA_RNA-Seq AUNIP-TRPM8 AUNIP chr1 26185771 - TRPM8 chr2 234904970 + Exonic hg19 PRAD TCGA-KK-A7AZ 9 9 Out-of-frame Inter-chr p36.11 q37.1 Seq+ 43542 ChimerSeq STARFusion TCGA_RNA-Seq SLC4A4-AUNIP SLC4A4 chr4 72263370 + AUNIP chr1 26162337 - Exonic hg19 PRAD TCGA-KK-A7AZ 2 12 Out-of-frame Inter-chr q13.3 p36.11 Seq+ 43543 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649522 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-KK-A7AP 195 827 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 43544 ChimerSeq STARFusion TCGA_RNA-Seq TIA1-ACTR2 TIA1 chr2 70463211 - ACTR2 chr2 65478161 + Exonic hg19 PRAD TCGA-KK-A7AP 36 89 In-Frame Intra-chr p13.3 p14 TKL:STKR Seq+ 43545 ChimerSeq STARFusion TCGA_RNA-Seq C2orf42-ACTR2 C2orf42 chr2 70463211 - ACTR2 chr2 65478161 + Exonic hg19 PRAD TCGA-KK-A7AP 17 25 5'UTR-CDS Intra-chr p13.3 p14 TKL:STKR Seq+ 43546 ChimerSeq STARFusion TCGA_RNA-Seq RASGRF1-HOMER2 RASGRF1 chr15 79382565 - HOMER2 chr15 83561593 - Exonic hg19 PRAD TCGA-KK-A7AP 2 9 Out-of-frame Intra-chr q25.1 q25.2 Tumor suppressor gene Seq+ 43547 ChimerSeq STARFusion TCGA_RNA-Seq C1orf132-TSC22D3 C1orf132 chr1 207989274 - TSC22D3 chrX 106959180 - Exonic hg19 PRAD TCGA-V1-A8WN 80 177 Out-of-frame Inter-chr q32.2 q22.3 Seq+ 43548 ChimerSeq STARFusion TCGA_RNA-Seq SERF2-GPN2 SERF2 chr15 44091305 + GPN2 chr1 27210781 - Exonic hg19 PRAD TCGA-V1-A8WN 2 27 3'UTR-CDS Inter-chr q15.3 p36.11 Seq+ 43549 ChimerSeq STARFusion TCGA_RNA-Seq MMP11-GAS2L1 MMP11 chr22 24115165 + GAS2L1 chr22 29706429 + Exonic hg19 PRAD TCGA-V1-A8WN 2 6 In-Frame Intra-chr q11.23 q12.2 Seq+ 43550 ChimerSeq STARFusion TCGA_RNA-Seq SCARB1-SUB1 SCARB1 chr12 125348141 - SUB1 chr5 32599067 + Exonic hg19 PRAD TCGA-KK-A7AU 16 38 In-Frame Inter-chr q24.31 p13.3 Seq+ 43551 ChimerSeq STARFusion TCGA_RNA-Seq DSTN-DTD1 DSTN chr20 17550856 + DTD1 chr20 18724744 + Exonic hg19 PRAD TCGA-KK-A7AU 13 36 In-Frame Intra-chr p12.1 p11.23 Seq+ 43552 ChimerSeq STARFusion TCGA_RNA-Seq BMS1-PHYHIPL BMS1 chr10 43297666 + PHYHIPL chr10 60996243 + Exonic hg19 PRAD TCGA-KK-A7AU 6 12 Out-of-frame Intra-chr q11.21 q21.1 Seq+ 43553 ChimerSeq STARFusion TCGA_RNA-Seq GSR-STMN2 GSR chr8 30557598 - STMN2 chr8 80549037 + Exonic hg19 PRAD TCGA-KK-A7AV 4 6 Out-of-frame Intra-chr p12 q21.13 Seq+ 43554 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880008 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-KK-A7AW 8 14 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 43555 ChimerSeq STARFusion TCGA_RNA-Seq TTC39A-MRPL37 TTC39A chr1 51771649 - MRPL37 chr1 54681814 + Exonic hg19 PRAD TCGA-KK-A7AW 7 9 In-Frame Intra-chr p32.3 p32.3 Seq+ 43556 ChimerSeq STARFusion TCGA_RNA-Seq KAT6A-TRAPPC9 KAT6A chr8 41905896 - TRAPPC9 chr8 141034176 - Exonic hg19 PRAD TCGA-KK-A7AW 3 5 In-Frame Intra-chr p11.21 Oncogene q24.3 Seq+ 43557 ChimerSeq STARFusion TCGA_RNA-Seq UBE2D3-GSTCD UBE2D3 chr4 103747642 - GSTCD chr4 106744111 + Exonic hg19 PRAD TCGA-V1-A8WS 34 105 Out-of-frame Intra-chr q24 q24 Seq+ 43558 ChimerSeq STARFusion TCGA_RNA-Seq CHTF8-TBC1D22A CHTF8 chr16 69165992 - TBC1D22A chr22 47569141 + Exonic hg19 PRAD TCGA-V1-A8WS 35 46 5'UTR-CDS Inter-chr q22.1 q13.31 Seq+ 43559 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-INPP4B TMPRSS2 chr21 42880008 - INPP4B chr4 143191927 - Exonic hg19 PRAD TCGA-V1-A8WS 29 54 5'UTR-CDS Inter-chr q22.3 q31.21 Tumor suppressor gene Seq+ 43560 ChimerSeq STARFusion TCGA_RNA-Seq UBE2D3-GSTCD UBE2D3 chr4 103747642 - GSTCD chr4 106744388 + Exonic hg19 PRAD TCGA-V1-A8WS 4 91 In-Frame Intra-chr q24 q24 Seq+ 43561 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-INPP4B TMPRSS2 chr21 42879877 - INPP4B chr4 143191927 - Exonic hg19 PRAD TCGA-V1-A8WS 7 53 Out-of-frame Inter-chr q22.3 q31.21 Tumor suppressor gene Seq+ 43562 ChimerSeq STARFusion TCGA_RNA-Seq HERC2-TMEM145 HERC2 chr15 28544548 - TMEM145 chr19 42818424 + Exonic hg19 PRAD TCGA-V1-A8WS 12 28 Out-of-frame Inter-chr q13.2 Seq+ 43563 ChimerSeq STARFusion TCGA_RNA-Seq ELP5-ZNF614 ELP5 chr17 7160357 + ZNF614 chr19 52516499 - Exonic hg19 PRAD TCGA-V1-A8WS 4 37 Out-of-frame Inter-chr p13.1 q13.41 Transcription factor Seq+ 43564 ChimerSeq STARFusion TCGA_RNA-Seq ERG-TMPRSS2 ERG chr21 39947586 - TMPRSS2 chr21 42852529 - Exonic hg19 PRAD TCGA-V1-A8WS 5 6 Out-of-frame Intra-chr q22.2 Oncogene Transcription factor q22.3 Seq+ 43565 ChimerSeq STARFusion TCGA_RNA-Seq DYM-KATNAL2 DYM chr18 46889531 - KATNAL2 chr18 44579251 + Exonic hg19 PRAD TCGA-V1-A8WS 2 10 CDS-5'UTR Intra-chr q21.1 q21.1 Seq+ 43566 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK1-MAP2K5 EIF2AK1 chr7 6077055 - MAP2K5 chr15 68098984 + Exonic hg19 PRAD TCGA-V1-A8WV 8 22 In-Frame Inter-chr p22.1 q23 STE:STE7 Seq+ 43567 ChimerSeq STARFusion TCGA_RNA-Seq BEND7-FRMD4A BEND7 chr10 13541739 - FRMD4A chr10 13900912 - Exonic hg19 PRAD TCGA-V1-A8WV 5 5 Out-of-frame Intra-chr p13 p13 Seq+ 43568 ChimerSeq STARFusion TCGA_RNA-Seq FBXL3-MYCBP2 FBXL3 chr13 77589544 - MYCBP2 chr13 77625297 - Exonic hg19 PRAD TCGA-V1-A8WV 2 16 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 43569 ChimerSeq STARFusion TCGA_RNA-Seq NDRG1-ERG NDRG1 chr8 134292474 - ERG chr21 39817543 - Exonic hg19 PRAD TCGA-V1-A8WW 50 160 Out-of-frame Inter-chr q24.22 Tumor suppressor gene q22.2 Oncogene Transcription factor KB Pub Seq+ 43570 ChimerSeq STARFusion TCGA_RNA-Seq TMEM68-DPYS TMEM68 chr8 56656040 - DPYS chr8 105436617 - Exonic hg19 PRAD TCGA-FC-A4JI 88 286 Out-of-frame Intra-chr q12.1 q22.3 Seq+ 43571 ChimerSeq STARFusion TCGA_RNA-Seq NAP1L4-ATP11B NAP1L4 chr11 2985910 - ATP11B chr3 182631649 + Exonic hg19 PRAD TCGA-FC-A4JI 50 104 In-Frame Inter-chr q26.33 Oncogene Seq+ 43572 ChimerSeq STARFusion TCGA_RNA-Seq NCOA2-EIF4EBP1 NCOA2 chr8 71315935 - EIF4EBP1 chr8 37914599 + Exonic hg19 PRAD TCGA-FC-A4JI 23 85 5'UTR-CDS Intra-chr q13.3 Oncogene Transcription factor p11.23 Seq+ 43573 ChimerSeq STARFusion TCGA_RNA-Seq NRG1-STMN2 NRG1 chr8 32463201 + STMN2 chr8 80549037 + Exonic hg19 PRAD TCGA-FC-A4JI 17 71 In-Frame Intra-chr p12 q21.13 Seq+ 43574 ChimerSeq STARFusion TCGA_RNA-Seq SPIDR-SLA SPIDR chr8 48320523 + SLA chr8 134087375 - Exonic hg19 PRAD TCGA-FC-A4JI 13 53 Out-of-frame Intra-chr q11.21 q24.22 Seq+ 43575 ChimerSeq STARFusion TCGA_RNA-Seq TTC21B-COBLL1 TTC21B chr2 166714725 - COBLL1 chr2 165600385 - Exonic hg19 PRAD TCGA-FC-A4JI 6 33 3'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 43576 ChimerSeq STARFusion TCGA_RNA-Seq TTC21B-COBLL1 TTC21B chr2 166727307 - COBLL1 chr2 165600385 - Exonic hg19 PRAD TCGA-FC-A4JI 4 33 3'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 43577 ChimerSeq STARFusion TCGA_RNA-Seq CADM2-UBE2E2 CADM2 chr3 85008819 + UBE2E2 chr3 23574045 + Exonic hg19 PRAD TCGA-FC-A4JI 6 16 Out-of-frame Intra-chr p12.1 Tumor suppressor gene p24.3 Seq+ 43578 ChimerSeq STARFusion TCGA_RNA-Seq NFIB-NCF1 NFIB chr9 14146688 - NCF1 chr7 74188326 + Exonic hg19 PRAD TCGA-FC-A4JI 5 10 CDS-5'UTR Inter-chr p22.3 Transcription factor q11.23 43579 ChimerSeq STARFusion TCGA_RNA-Seq TP53TG1-SLC4A4 TP53TG1 chr7 86970839 - SLC4A4 chr4 72205087 + Exonic hg19 PRAD TCGA-FC-A4JI 4 8 3'UTR-CDS Inter-chr q21.12 q13.3 Seq+ 43580 ChimerSeq STARFusion TCGA_RNA-Seq CAPZA2-CMSS1 CAPZA2 chr7 116528244 + CMSS1 chr3 99865817 + Exonic hg19 PRAD TCGA-FC-A4JI 2 8 Out-of-frame Inter-chr q31.2 q12.1 Seq+ 43581 ChimerSeq STARFusion TCGA_RNA-Seq PCGEM1-KBTBD12 PCGEM1 chr2 193615598 + KBTBD12 chr3 127646607 + Exonic hg19 PRAD TCGA-FC-A4JI 2 8 5'UTR-CDS Inter-chr q32.3 q21.3 Seq+ 43582 ChimerSeq STARFusion TCGA_RNA-Seq CUL5-OPCML CUL5 chr11 107880098 + OPCML chr11 132307253 - Exonic hg19 PRAD TCGA-FC-A4JI 2 7 Out-of-frame Intra-chr q22.3 Tumor suppressor gene q25 Tumor suppressor gene Seq+ 43583 ChimerSeq STARFusion TCGA_RNA-Seq SNX19-USP28 SNX19 chr11 130784161 - USP28 chr11 113675768 - Exonic hg19 PRAD TCGA-HC-7232 24 134 In-Frame Intra-chr q25 q23.2 Seq+ 43584 ChimerSeq STARFusion TCGA_RNA-Seq SNX19-USP28 SNX19 chr11 130786175 - USP28 chr11 113675768 - Exonic hg19 PRAD TCGA-HC-7232 6 131 5'UTR-CDS Intra-chr q25 q23.2 Seq+ 43585 ChimerSeq STARFusion TCGA_RNA-Seq UTRN-MMADHC UTRN chr6 144844324 + MMADHC chr2 150443663 - Exonic hg19 PRAD TCGA-HC-7232 18 41 CDS-5'UTR Inter-chr q24.2 q23.2 Seq+ 43586 ChimerSeq STARFusion TCGA_RNA-Seq GPHN-SLC8A3 GPHN chr14 67589094 + SLC8A3 chr14 70527656 - Exonic hg19 PRAD TCGA-HC-7232 9 21 In-Frame Intra-chr q23.3 q24.2 Seq+ 43587 ChimerSeq STARFusion TCGA_RNA-Seq TMEFF2-UBE2E3 TMEFF2 chr2 193044394 - UBE2E3 chr2 181922420 + Exonic hg19 PRAD TCGA-HC-7232 5 15 Out-of-frame Intra-chr q32.3 Tumor suppressor gene q31.3 Seq+ 43588 ChimerSeq STARFusion TCGA_RNA-Seq REPS2-SMARCA1 REPS2 chrX 17047746 + SMARCA1 chrX 128615162 - Exonic hg19 PRAD TCGA-HC-7232 4 7 In-Frame Intra-chr p22.2 q26.1 Seq+ 43589 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L1-CARM1 NFE2L1 chr17 46134864 + CARM1 chr19 11022860 + Exonic hg19 PRAD TCGA-HC-7232 3 10 In-Frame Inter-chr q21.32 Transcription factor p13.2 Seq+ 43590 ChimerSeq STARFusion TCGA_RNA-Seq ZFHX3-ALS2CR11 ZFHX3 chr16 72984368 - ALS2CR11 chr2 202440049 - Exonic hg19 PRAD TCGA-HC-7232 2 14 In-Frame Inter-chr q22.3 Tumor suppressor gene Transcription factor Seq+ 43591 ChimerSeq STARFusion TCGA_RNA-Seq ZFHX3-ALS2CR11 ZFHX3 chr16 72984368 - ALS2CR11 chr2 202436743 - Exonic hg19 PRAD TCGA-HC-7232 2 14 In-Frame Inter-chr q22.3 Tumor suppressor gene Transcription factor Seq+ 43592 ChimerSeq STARFusion TCGA_RNA-Seq CTNNB1-KLK3 CTNNB1 chr3 41281528 + KLK3 chr19 51363498 + Exonic hg19 PRAD TCGA-HC-7232 3 5 Out-of-frame Inter-chr p22.1 Oncogene q13.33 43593 ChimerSeq STARFusion TCGA_RNA-Seq ACPP-SAFB2 ACPP chr3 132036420 + SAFB2 chr19 5616346 - Exonic hg19 PRAD TCGA-HC-7233 152 511 In-Frame Inter-chr q22.1 p13.3 Tumor suppressor gene Transcription factor Seq+ 43594 ChimerSeq STARFusion TCGA_RNA-Seq TXNDC16-ARG2 TXNDC16 chr14 53009089 - ARG2 chr14 68108903 + Exonic hg19 PRAD TCGA-HC-7233 8 32 CDS-5'UTR Intra-chr q22.1 q24.1 Seq+ 43595 ChimerSeq STARFusion TCGA_RNA-Seq EBPL-MIPEP EBPL chr13 50265390 - MIPEP chr13 24334356 - Exonic hg19 PRAD TCGA-HC-7233 4 9 In-Frame Intra-chr q14.2 q12.12 Seq+ 43596 ChimerSeq STARFusion TCGA_RNA-Seq SETD5-MCM7 SETD5 chr3 9439661 + MCM7 chr7 99696338 - Exonic hg19 PRAD TCGA-HC-7233 2 12 5'UTR-CDS Inter-chr p25.3 q22.1 Seq+ 43597 ChimerSeq STARFusion TCGA_RNA-Seq NAA25-WSCD2 NAA25 chr12 112546520 - WSCD2 chr12 108620767 + Exonic hg19 PRAD TCGA-HC-7230 9 18 Out-of-frame Intra-chr q24.13 q23.3 Seq+ 43598 ChimerSeq STARFusion TCGA_RNA-Seq CAB39L-USP12 CAB39L chr13 49906083 - USP12 chr13 27649525 - Exonic hg19 PRAD TCGA-HC-7230 5 6 Out-of-frame Intra-chr q14.2 q12.13 Tumor suppressor gene Seq+ 43599 ChimerSeq STARFusion TCGA_RNA-Seq ERG-SON ERG chr21 39947586 - SON chr21 34918519 + Exonic hg19 PRAD TCGA-HC-7230 3 11 Out-of-frame Intra-chr q22.2 Oncogene Transcription factor q22.11 Transcription factor Seq+ 43600 ChimerSeq STARFusion TCGA_RNA-Seq TP53-DHX33 TP53 chr17 7578439 - DHX33 chr17 5347154 - Exonic hg19 PRAD TCGA-HC-A48F 28 85 Out-of-frame Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.2 Seq+ 43601 ChimerSeq STARFusion TCGA_RNA-Seq NRP1-PTEN NRP1 chr10 33619636 - PTEN chr10 89717610 + Exonic hg19 PRAD TCGA-HC-A48F 5 36 Out-of-frame Intra-chr p11.22 q23.31 Oncogene Tumor suppressor gene Seq+ 43602 ChimerSeq STARFusion TCGA_RNA-Seq PTEN-NRP1 PTEN chr10 89693008 + NRP1 chr10 33559784 - Exonic hg19 PRAD TCGA-HC-A48F 6 8 Out-of-frame Intra-chr q23.31 Oncogene Tumor suppressor gene p11.22 Seq+ 43603 ChimerSeq STARFusion TCGA_RNA-Seq CLHC1-FAM98A CLHC1 chr2 55455168 - FAM98A chr2 33812387 - Exonic hg19 PRAD TCGA-HC-A48F 3 9 Out-of-frame Intra-chr p16.1 p22.3 Seq+ 43604 ChimerSeq STARFusion TCGA_RNA-Seq CLHC1-FAM98A CLHC1 chr2 55459359 - FAM98A chr2 33812387 - Exonic hg19 PRAD TCGA-HC-A48F 2 9 Out-of-frame Intra-chr p16.1 p22.3 Seq+ 43605 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880008 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-KC-A7FD 162 555 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 43606 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880008 - ETV4 chr17 41623036 - Exonic hg19 PRAD TCGA-KC-A7FD 60 545 5'UTR-5'UTR Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 43607 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880008 - ETV4 chr17 41622738 - Exonic hg19 PRAD TCGA-KC-A7FD 43 545 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 43608 ChimerSeq STARFusion TCGA_RNA-Seq EIF5AL1-MRPL39 EIF5AL1 chr10 81272879 + MRPL39 chr21 26969728 - Exonic hg19 PRAD TCGA-KC-A7FD 8 7 Out-of-frame Inter-chr q22.3 q21.3 43609 ChimerSeq STARFusion TCGA_RNA-Seq MRPL39-SLC35G6 MRPL39 chr21 26972111 - SLC35G6 chr17 7385307 + Exonic hg19 PRAD TCGA-KC-A7FD 3 5 In-Frame Inter-chr q21.3 Seq+ 43610 ChimerSeq STARFusion TCGA_RNA-Seq NPAS2-GNLY NPAS2 chr2 101565942 + GNLY chr2 85922443 + Exonic hg19 PRAD TCGA-KC-A7FA 6 7 In-Frame Intra-chr q11.2 Tumor suppressor gene Transcription factor p11.2 Seq+ 43611 ChimerSeq STARFusion TCGA_RNA-Seq FAM35A-DOCK1 FAM35A chr10 88930731 + DOCK1 chr10 129201319 + Exonic hg19 PRAD TCGA-KC-A7FA 2 12 Out-of-frame Intra-chr q23.2 q26.2 Seq+ 43612 ChimerSeq STARFusion TCGA_RNA-Seq AFF1-RBFOX1 AFF1 chr4 87968746 + RBFOX1 chr16 7102058 + Exonic hg19 PRAD TCGA-KC-A4BV 6 22 CDS-5'UTR Inter-chr q21.3 Oncogene p13.3 Seq+ 43613 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-CRAT SEPT9 chr17 75303279 + CRAT chr9 131866585 - Exonic hg19 PRAD TCGA-KC-A4BV 3 16 Out-of-frame Inter-chr q34.11 Seq+ 43614 ChimerSeq STARFusion TCGA_RNA-Seq BACE2-TMPRSS2 BACE2 chr21 42629253 + TMPRSS2 chr21 42848547 - Exonic hg19 PRAD TCGA-KC-A4BV 5 6 Out-of-frame Intra-chr q22.2 q22.3 Seq+ 43615 ChimerSeq STARFusion TCGA_RNA-Seq ZNF716-C7orf72 ZNF716 chr7 57510033 + C7orf72 chr7 50191046 + Exonic hg19 PRAD TCGA-J9-A8CP 58 160 Out-of-frame Intra-chr p11.2 Transcription factor p12.2 Seq+ 43616 ChimerSeq STARFusion TCGA_RNA-Seq FOCAD-PDZRN4 FOCAD chr9 20789607 + PDZRN4 chr12 41946458 + Exonic hg19 PRAD TCGA-J9-A8CP 3 15 In-Frame Inter-chr p21.3 q12 Seq+ 43617 ChimerSeq STARFusion TCGA_RNA-Seq KLK2-FGFR2 KLK2 chr19 51376775 + FGFR2 chr10 123310973 - Exonic hg19 PRAD TCGA-V1-A9O5 185 866 In-Frame Inter-chr q13.33 q26.13 TK:FGFR Oncogene KB Pub Seq+ 43618 ChimerSeq STARFusion TCGA_RNA-Seq KIAA2022-PBDC1 KIAA2022 chrX 74144718 - PBDC1 chrX 75392785 + Exonic hg19 PRAD TCGA-V1-A9O5 4 12 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 43619 ChimerSeq STARFusion TCGA_RNA-Seq CEP70-TNFSF10 CEP70 chr3 138216873 - TNFSF10 chr3 172227111 - Exonic hg19 PRAD TCGA-V1-A9O5 2 11 In-Frame Intra-chr q22.3 q26.31 Seq+ 43620 ChimerSeq STARFusion TCGA_RNA-Seq FAM110B-DIABLO FAM110B chr8 58907365 + DIABLO chr12 122702944 - Exonic hg19 PRAD TCGA-EJ-5526 11 75 5'UTR-CDS Inter-chr q12.1 q24.31 Tumor suppressor gene Seq+ 43621 ChimerSeq STARFusion TCGA_RNA-Seq FAM110B-DIABLO FAM110B chr8 58914207 + DIABLO chr12 122702944 - Exonic hg19 PRAD TCGA-EJ-5526 3 75 5'UTR-CDS Inter-chr q12.1 q24.31 Tumor suppressor gene Seq+ 43622 ChimerSeq STARFusion TCGA_RNA-Seq MYH11-IGKC MYH11 chr16 15807723 - IGKC chr2 89161432 - Exonic hg19 PRAD TCGA-EJ-5526 9 2 Out-of-frame Inter-chr Oncogene p11.2 43623 ChimerSeq STARFusion TCGA_RNA-Seq RPL3-KLK3 RPL3 chr22 39711399 - KLK3 chr19 51361795 + Exonic hg19 PRAD TCGA-EJ-5526 3 13 Out-of-frame Inter-chr q13.1 q13.33 43624 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-DIAPH1 TMPRSS2 chr21 42842575 - DIAPH1 chr5 140914000 - Exonic hg19 PRAD TCGA-EJ-5526 4 7 In-Frame Inter-chr q22.3 q31.3 Seq+ 43625 ChimerSeq STARFusion TCGA_RNA-Seq ACSL3-LINC00592 ACSL3 chr2 223797998 + LINC00592 chr12 52617230 + Exonic hg19 PRAD TCGA-J9-A8CK 9 54 CDS-5'UTR Inter-chr q36.1 q13.13 Seq+ 43626 ChimerSeq STARFusion TCGA_RNA-Seq SMG6-C10orf11 SMG6 chr17 2075952 - C10orf11 chr10 78316967 + Exonic hg19 PRAD TCGA-J9-A8CK 7 37 Out-of-frame Inter-chr p13.3 Seq+ 43627 ChimerSeq STARFusion TCGA_RNA-Seq PI4K2A-AS3MT PI4K2A chr10 99426877 + AS3MT chr10 104650301 + Exonic hg19 PRAD TCGA-J9-A8CK 10 15 In-Frame Intra-chr q24.2 q24.32 Seq+ 43628 ChimerSeq STARFusion TCGA_RNA-Seq PI4K2A-AS3MT PI4K2A chr10 99426877 + AS3MT chr10 104650301 + Exonic hg19 PRAD TCGA-J9-A8CK 10 15 In-Frame Intra-chr q24.2 q24.32 Seq+ 43629 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPC-WRN HNRNPC chr14 21698478 - WRN chr8 31030511 + Exonic hg19 PRAD TCGA-J9-A8CK 6 15 Out-of-frame Inter-chr q11.2 p12 Oncogene Seq+ 43630 ChimerSeq STARFusion TCGA_RNA-Seq USP1-EFCAB7 USP1 chr1 62903071 + EFCAB7 chr1 64027380 + Exonic hg19 PRAD TCGA-J9-A8CK 3 27 5'UTR-CDS Intra-chr p31.3 p31.3 Seq+ 43631 ChimerSeq STARFusion TCGA_RNA-Seq USP1-EFCAB7 USP1 chr1 62902233 + EFCAB7 chr1 64027380 + Exonic hg19 PRAD TCGA-J9-A8CK 2 27 5'UTR-CDS Intra-chr p31.3 p31.3 Seq+ 43632 ChimerSeq STARFusion TCGA_RNA-Seq VKORC1L1-KCTD7 VKORC1L1 chr7 65338552 + KCTD7 chr7 66270127 + Exonic hg19 PRAD TCGA-J9-A8CK 2 7 CDS-3'UTR Intra-chr q11.21 q11.21 43633 ChimerSeq STARFusion TCGA_RNA-Seq VKORC1L1-RABGEF1 VKORC1L1 chr7 65338552 + RABGEF1 chr7 66270127 + Exonic hg19 PRAD TCGA-J9-A8CK 2 7 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 43634 ChimerSeq STARFusion TCGA_RNA-Seq MLYCD-MGRN1 MLYCD chr16 83945972 + MGRN1 chr16 4718266 + Exonic hg19 PRAD TCGA-EJ-5524 4 44 In-Frame Intra-chr q23.3 p13.3 Seq+ 43635 ChimerSeq STARFusion TCGA_RNA-Seq RAD17-SEC24A RAD17 chr5 68670538 + SEC24A chr5 134050714 + Exonic hg19 PRAD TCGA-EJ-5524 6 14 In-Frame Intra-chr q31.1 Seq+ 43636 ChimerSeq STARFusion TCGA_RNA-Seq AMMECR1L-TNFRSF10C AMMECR1L chr2 128641777 - TNFRSF10C chr8 22969233 + Exonic hg19 PRAD TCGA-EJ-5524 3 24 5'UTR-CDS Inter-chr q14.3 p21.3 Seq+ 43637 ChimerSeq STARFusion TCGA_RNA-Seq PPM1H-KIAA1467 PPM1H chr12 63131282 - KIAA1467 chr12 13214509 + Exonic hg19 PRAD TCGA-EJ-5524 5 11 Out-of-frame Intra-chr q14.2 Seq+ 43638 ChimerSeq STARFusion TCGA_RNA-Seq LCOR-C10orf131 LCOR chr10 98593236 + C10orf131 chr10 97681773 + Exonic hg19 PRAD TCGA-EJ-5524 4 13 5'UTR-CDS Intra-chr q24.1 Transcription factor Seq+ 43639 ChimerSeq STARFusion TCGA_RNA-Seq OR51E2-RRM1 OR51E2 chr11 4718883 - RRM1 chr11 4123223 + Exonic hg19 PRAD TCGA-EJ-5524 4 9 5'UTR-3'UTR Intra-chr p15.4 p15.4 Oncogene Seq+ 43640 ChimerSeq STARFusion TCGA_RNA-Seq CORO7-CLEC16A CORO7 chr16 4462357 - CLEC16A chr16 11114050 + Exonic hg19 PRAD TCGA-EJ-5524 2 13 In-Frame Intra-chr p13.3 p13.13 Seq+ 43641 ChimerSeq STARFusion TCGA_RNA-Seq TP53-KIAA0753 TP53 chr17 7590695 - KIAA0753 chr17 6498373 - Exonic hg19 PRAD TCGA-EJ-5525 13 54 5'UTR-CDS Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.1 Seq+ 43642 ChimerSeq STARFusion TCGA_RNA-Seq PAK2-PIGX PAK2 chr3 196467028 + PIGX chr3 196443729 + Exonic hg19 PRAD TCGA-EJ-5525 12 5 5'UTR-CDS Intra-chr q29 STE:STE20 q29 Seq+ 43643 ChimerSeq STARFusion TCGA_RNA-Seq WLS-TBX3 WLS chr1 68603463 - TBX3 chr12 115110107 - Exonic hg19 PRAD TCGA-EJ-5525 7 13 Out-of-frame Inter-chr p31.3 q24.21 Transcription factor Seq+ 43644 ChimerSeq STARFusion TCGA_RNA-Seq ABCB8-IQCA1P1 ABCB8 chr7 150725697 + IQCA1P1 chr7 150889916 - Exonic hg19 PRAD TCGA-EJ-5525 2 14 Out-of-frame Intra-chr q36.1 43645 ChimerSeq STARFusion TCGA_RNA-Seq MESDC2-TMPRSS2 MESDC2 chr15 81271107 - TMPRSS2 chr21 42842670 - Exonic hg19 PRAD TCGA-EJ-5525 3 7 3'UTR-CDS Inter-chr q25.1 q22.3 Seq+ 43646 ChimerSeq STARFusion TCGA_RNA-Seq PAK2-PIGX PAK2 chr3 196467028 + PIGX chr3 196449286 + Exonic hg19 PRAD TCGA-EJ-5525 3 5 5'UTR-CDS Intra-chr q29 STE:STE20 q29 Seq+ 43647 ChimerSeq STARFusion TCGA_RNA-Seq CLN6-ALDH1A2 CLN6 chr15 68510874 - ALDH1A2 chr15 58458995 - Exonic hg19 PRAD TCGA-EJ-5525 2 4 CDS-5'UTR Intra-chr q23 q21.3 Tumor suppressor gene Seq+ 43648 ChimerSeq STARFusion TCGA_RNA-Seq CHD6-SNX21 CHD6 chr20 40043825 - SNX21 chr20 44469072 + Exonic hg19 PRAD TCGA-J9-A8CN 10 51 Out-of-frame Intra-chr q12 q13.12 Seq+ 43649 ChimerSeq STARFusion TCGA_RNA-Seq MAPRE1-TM9SF4 MAPRE1 chr20 31427662 + TM9SF4 chr20 30720816 + Exonic hg19 PRAD TCGA-J9-A8CN 16 27 In-Frame Intra-chr q11.21 q11.21 Seq+ 43650 ChimerSeq STARFusion TCGA_RNA-Seq MOB1B-AMBN MOB1B chr4 71768267 + AMBN chr4 71458034 + Exonic hg19 PRAD TCGA-J9-A8CL 32 100 5'UTR-5'UTR Intra-chr q13.3 Tumor suppressor gene q13.3 Seq+ 43651 ChimerSeq STARFusion TCGA_RNA-Seq MOB1B-AMBN MOB1B chr4 71768267 + AMBN chr4 71455423 + Exonic hg19 PRAD TCGA-J9-A8CL 9 99 5'UTR-5'UTR Intra-chr q13.3 Tumor suppressor gene q13.3 Seq+ 43652 ChimerSeq STARFusion TCGA_RNA-Seq GPR107-GARNL3 GPR107 chr9 132861811 + GARNL3 chr9 130155362 + Exonic hg19 PRAD TCGA-J9-A8CL 9 50 Out-of-frame Intra-chr q34.11 q33.3 Seq+ 43653 ChimerSeq STARFusion TCGA_RNA-Seq C4orf29-SLC25A31 C4orf29 chr4 128910976 + SLC25A31 chr4 128694541 + Exonic hg19 PRAD TCGA-J9-A8CL 14 12 Out-of-frame Intra-chr q28.1 Seq+ 43654 ChimerSeq STARFusion TCGA_RNA-Seq AGAP1-SP140L AGAP1 chr2 236403493 + SP140L chr2 231261472 + Exonic hg19 PRAD TCGA-J9-A8CL 8 31 Out-of-frame Intra-chr q37.2 q37.1 Transcription factor Seq+ 43655 ChimerSeq STARFusion TCGA_RNA-Seq AGAP1-SP140L AGAP1 chr2 236403493 + SP140L chr2 231264842 + Exonic hg19 PRAD TCGA-J9-A8CL 2 27 Out-of-frame Intra-chr q37.2 q37.1 Transcription factor Seq+ 43656 ChimerSeq STARFusion TCGA_RNA-Seq PIAS1-ZNF609 PIAS1 chr15 68346688 + ZNF609 chr15 64970315 + Exonic hg19 PRAD TCGA-J9-A8CL 5 6 In-Frame Intra-chr q23 Tumor suppressor gene q22.31 Transcription factor Seq+ 43657 ChimerSeq STARFusion TCGA_RNA-Seq AGAP1-SP140 AGAP1 chr2 236403493 + SP140 chr2 231162136 + Exonic hg19 PRAD TCGA-J9-A8CL 3 8 Out-of-frame Intra-chr q37.2 q37.1 Transcription factor Seq+ 43658 ChimerSeq STARFusion TCGA_RNA-Seq C4orf29-SLC25A31 C4orf29 chr4 128905578 + SLC25A31 chr4 128694541 + Exonic hg19 PRAD TCGA-J9-A8CL 2 12 In-Frame Intra-chr q28.1 Seq+ 43659 ChimerSeq STARFusion TCGA_RNA-Seq FIG4-C6orf183 FIG4 chr6 110012704 + C6orf183 chr6 109548649 + Exonic hg19 PRAD TCGA-J9-A8CL 2 12 Out-of-frame Intra-chr q21 43660 ChimerSeq STARFusion TCGA_RNA-Seq PIAS1-ZNF609 PIAS1 chr15 68347576 + ZNF609 chr15 64970315 + Exonic hg19 PRAD TCGA-J9-A8CL 3 6 Out-of-frame Intra-chr q23 Tumor suppressor gene q22.31 Transcription factor Seq+ 43661 ChimerSeq STARFusion TCGA_RNA-Seq PIAS1-ZNF609 PIAS1 chr15 68347569 + ZNF609 chr15 64970315 + Exonic hg19 PRAD TCGA-J9-A8CL 3 6 Out-of-frame Intra-chr q23 Tumor suppressor gene q22.31 Transcription factor Seq+ 43662 ChimerSeq STARFusion TCGA_RNA-Seq CBL-CXCR5 CBL chr11 119103405 + CXCR5 chr11 118764305 + Exonic hg19 PRAD TCGA-J9-A8CL 2 6 Out-of-frame Intra-chr q23.3 Oncogene Tumor suppressor gene q23.3 Seq+ 43663 ChimerSeq STARFusion TCGA_RNA-Seq GSR-RBPMS GSR chr8 30585047 - RBPMS chr8 30416404 + Exonic hg19 PRAD TCGA-EJ-5521 62 143 In-Frame Intra-chr p12 p12 Seq+ 43664 ChimerSeq STARFusion TCGA_RNA-Seq PICALM-GLYATL1P2 PICALM chr11 85779693 - GLYATL1P2 chr11 58652379 + Exonic hg19 PRAD TCGA-EJ-5521 2 53 Out-of-frame Intra-chr q14.2 q12.1 Seq+ 43665 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1-RNF4 WHSC1 chr4 1873269 + RNF4 chr4 2492064 + Exonic hg19 PRAD TCGA-EJ-5521 7 22 5'UTR-5'UTR Intra-chr Oncogene p16.3 Seq+ 43666 ChimerSeq STARFusion TCGA_RNA-Seq PDE4D-DEPDC1B PDE4D chr5 59481384 - DEPDC1B chr5 59943360 - Exonic hg19 PRAD TCGA-EJ-5521 5 28 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 43667 ChimerSeq STARFusion TCGA_RNA-Seq UGGT2-ANKRD16 UGGT2 chr13 96705409 - ANKRD16 chr10 5904654 - Exonic hg19 PRAD TCGA-EJ-5521 2 18 CDS-3'UTR Inter-chr q32.1 p15.1 Seq+ 43668 ChimerSeq STARFusion TCGA_RNA-Seq PTEN-CTNNA3 PTEN chr10 89690846 + CTNNA3 chr10 69038836 - Exonic hg19 PRAD TCGA-EJ-5521 3 7 Out-of-frame Intra-chr q23.31 Oncogene Tumor suppressor gene q21.3 Tumor suppressor gene Seq+ 43669 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-LSAMP ZBTB20 chr3 114412375 - LSAMP chr3 115571464 - Exonic hg19 PRAD TCGA-EJ-8468 2 26 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.31 Tumor suppressor gene Seq+ 43670 ChimerSeq STARFusion TCGA_RNA-Seq PRCP-RAB30 PRCP chr11 82611277 - RAB30 chr11 82705164 - Exonic hg19 PRAD TCGA-EJ-8468 5 11 In-Frame Intra-chr q14.1 q14.1 Seq+ 43671 ChimerSeq STARFusion TCGA_RNA-Seq PRCP-RAB30 PRCP chr11 82611277 - RAB30 chr11 82698812 - Exonic hg19 PRAD TCGA-EJ-8468 3 11 In-Frame Intra-chr q14.1 q14.1 Seq+ 43672 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-MRPS6 TMPRSS2 chr21 42845252 - MRPS6 chr21 35497641 + Exonic hg19 PRAD TCGA-EJ-8469 180 660 Out-of-frame Intra-chr q22.3 q22.11 Seq+ 43673 ChimerSeq STARFusion TCGA_RNA-Seq KDM6A-ARHGAP6 KDM6A chrX 44918711 + ARHGAP6 chrX 11272827 - Exonic hg19 PRAD TCGA-EJ-8469 20 64 In-Frame Intra-chr p11.3 Oncogene Tumor suppressor gene p22.2 Seq+ 43674 ChimerSeq STARFusion TCGA_RNA-Seq GOLIM4-ZBBX GOLIM4 chr3 167812887 - ZBBX chr3 167000283 - Exonic hg19 PRAD TCGA-EJ-8469 12 37 In-Frame Intra-chr q26.2 q26.1 Seq+ 43675 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-ADAM33 TBL1XR1 chr3 176914909 - ADAM33 chr20 3657790 - Exonic hg19 PRAD TCGA-EJ-8469 7 43 5'UTR-CDS Inter-chr q26.32 p13 Seq+ 43676 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1598-DZANK1 KIAA1598 chr10 118764533 - DZANK1 chr20 18396093 - Exonic hg19 PRAD TCGA-EJ-8469 7 38 Out-of-frame Inter-chr p11.23 43677 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-ADAM33 TBL1XR1 chr3 176878659 - ADAM33 chr20 3657790 - Exonic hg19 PRAD TCGA-EJ-8469 3 42 5'UTR-CDS Inter-chr q26.32 p13 Seq+ 43678 ChimerSeq STARFusion TCGA_RNA-Seq GOLIM4-ZBBX GOLIM4 chr3 167813691 - ZBBX chr3 167000283 - Exonic hg19 PRAD TCGA-EJ-8469 3 37 5'UTR-CDS Intra-chr q26.2 q26.1 Seq+ 43679 ChimerSeq STARFusion TCGA_RNA-Seq BRD4-AKAP8L BRD4 chr19 15443101 - AKAP8L chr19 15514853 - Exonic hg19 PRAD TCGA-EJ-8469 6 9 5'UTR-CDS Intra-chr p13.12 Atypical:BRD p13.12 Transcription factor Seq+ 43680 ChimerSeq STARFusion TCGA_RNA-Seq BRD4-AKAP8L BRD4 chr19 15443101 - AKAP8L chr19 15512414 - Exonic hg19 PRAD TCGA-EJ-8469 4 9 5'UTR-CDS Intra-chr p13.12 Atypical:BRD p13.12 Transcription factor Seq+ 43681 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP6-KDM6A ARHGAP6 chrX 11445668 - KDM6A chrX 44920569 + Exonic hg19 PRAD TCGA-EJ-8469 2 12 5'UTR-CDS Intra-chr p22.2 p11.3 Oncogene Tumor suppressor gene Seq+ 43682 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP6-KDM6A ARHGAP6 chrX 11445668 - KDM6A chrX 44922667 + Exonic hg19 PRAD TCGA-EJ-8469 2 12 5'UTR-CDS Intra-chr p22.2 p11.3 Oncogene Tumor suppressor gene Seq+ 43683 ChimerSeq STARFusion TCGA_RNA-Seq HK1-CTNNA3 HK1 chr10 71078766 + CTNNA3 chr10 68535282 - Exonic hg19 PRAD TCGA-EJ-8469 2 11 In-Frame Intra-chr q22.1 q21.3 Tumor suppressor gene Seq+ 43684 ChimerSeq STARFusion TCGA_RNA-Seq DTD1-KIF16B DTD1 chr20 18608877 + KIF16B chr20 16496309 - Exonic hg19 PRAD TCGA-EJ-8469 3 6 In-Frame Intra-chr p11.23 p12.1 Seq+ 43685 ChimerSeq STARFusion TCGA_RNA-Seq CSPP1-CPA6 CSPP1 chr8 67976731 + CPA6 chr8 68346475 - Exonic hg19 PRAD TCGA-YL-A9WY 12 117 Out-of-frame Intra-chr q13.1 q13.2 Seq+ 43686 ChimerSeq STARFusion TCGA_RNA-Seq CSPP1-CPA6 CSPP1 chr8 67976773 + CPA6 chr8 68346475 - Exonic hg19 PRAD TCGA-YL-A9WY 7 117 Out-of-frame Intra-chr q13.1 q13.2 Seq+ 43687 ChimerSeq STARFusion TCGA_RNA-Seq NSF-ATP6V0E1 NSF chr17 44707816 + ATP6V0E1 chr5 172447241 + Exonic hg19 PRAD TCGA-YL-A9WY 13 38 Out-of-frame Inter-chr q35.1 Seq+ 43688 ChimerSeq STARFusion TCGA_RNA-Seq USP6NL-ANKRD16 USP6NL chr10 11639630 - ANKRD16 chr10 5904654 - Exonic hg19 PRAD TCGA-YL-A9WY 12 33 CDS-3'UTR Intra-chr p14 p15.1 Seq+ 43689 ChimerSeq STARFusion TCGA_RNA-Seq USP6NL-ANKRD16 USP6NL chr10 11639630 - ANKRD16 chr10 5922339 - Exonic hg19 PRAD TCGA-YL-A9WY 4 33 Out-of-frame Intra-chr p14 p15.1 Seq+ 43690 ChimerSeq STARFusion TCGA_RNA-Seq USP6NL-ANKRD16 USP6NL chr10 11653442 - ANKRD16 chr10 5904654 - Exonic hg19 PRAD TCGA-YL-A9WY 2 33 5'UTR-3'UTR Intra-chr p14 p15.1 Seq+ 43691 ChimerSeq STARFusion TCGA_RNA-Seq AKAP10-GID4 AKAP10 chr17 19839599 - GID4 chr17 17962182 + Exonic hg19 PRAD TCGA-YL-A9WY 4 16 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 43692 ChimerSeq STARFusion TCGA_RNA-Seq ANKIB1-CDK14 ANKIB1 chr7 91875833 + CDK14 chr7 90836480 + Exonic hg19 PRAD TCGA-YL-A9WY 4 16 5'UTR-3'UTR Intra-chr q21.2 q21.13 Seq+ 43693 ChimerSeq STARFusion TCGA_RNA-Seq USP6NL-GDI2 USP6NL chr10 11639630 - GDI2 chr10 5842668 - Exonic hg19 PRAD TCGA-YL-A9WY 2 8 Out-of-frame Intra-chr p14 p15.1 Seq+ 43694 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-EML4 TMPRSS2 chr21 42859167 - EML4 chr2 42558831 + Exonic hg19 PRAD TCGA-XK-AAIV 139 878 Out-of-frame Inter-chr q22.3 p21 Oncogene Seq+ 43695 ChimerSeq STARFusion TCGA_RNA-Seq NDRG1-MYC NDRG1 chr8 134292478 - MYC chr8 128750494 + Exonic hg19 PRAD TCGA-XK-AAIV 24 98 In-Frame Intra-chr q24.22 Tumor suppressor gene q24.21 Oncogene Transcription factor Seq+ 43696 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD22-MSMB ANKRD22 chr10 90585795 - MSMB chr10 51555731 + Exonic hg19 PRAD TCGA-XK-AAIV 32 50 In-Frame Intra-chr q23.31 q11.22 Tumor suppressor gene Seq+ 43697 ChimerSeq STARFusion TCGA_RNA-Seq NCOA2-SGSM3 NCOA2 chr8 71315935 - SGSM3 chr22 40796700 + Exonic hg19 PRAD TCGA-XK-AAIV 24 75 5'UTR-5'UTR Inter-chr q13.3 Oncogene Transcription factor q13.1 Seq+ 43698 ChimerSeq STARFusion TCGA_RNA-Seq NDRG1-MYC NDRG1 chr8 134292475 - MYC chr8 128750497 + Exonic hg19 PRAD TCGA-XK-AAIV 11 98 In-Frame Intra-chr q24.22 Tumor suppressor gene q24.21 Oncogene Transcription factor Seq+ 43699 ChimerSeq STARFusion TCGA_RNA-Seq NDRG1-MYC NDRG1 chr8 134292475 - MYC chr8 128750494 + Exonic hg19 PRAD TCGA-XK-AAIV 7 98 In-Frame Intra-chr q24.22 Tumor suppressor gene q24.21 Oncogene Transcription factor Seq+ 43700 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-INTS4 PPFIA1 chr11 70201917 + INTS4 chr11 77594998 - Exonic hg19 PRAD TCGA-XK-AAIV 18 42 Out-of-frame Intra-chr q13.3 q14.1 Seq+ 43701 ChimerSeq STARFusion TCGA_RNA-Seq FRMD8-PSMD9 FRMD8 chr11 65172539 + PSMD9 chr12 122353762 + Exonic hg19 PRAD TCGA-XK-AAIV 15 31 Out-of-frame Inter-chr q13.1 q24.31 Seq+ 43702 ChimerSeq STARFusion TCGA_RNA-Seq HSF1-MICALL1 HSF1 chr8 145515556 + MICALL1 chr22 38307959 + Exonic hg19 PRAD TCGA-XK-AAIV 15 9 Out-of-frame Inter-chr q24.3 Transcription factor q13.1 Seq+ 43703 ChimerSeq STARFusion TCGA_RNA-Seq RBM47-LEF1 RBM47 chr4 40631413 - LEF1 chr4 108969907 - Exonic hg19 PRAD TCGA-XK-AAIV 8 37 5'UTR-CDS Intra-chr p14 q25 Transcription factor Seq+ 43704 ChimerSeq STARFusion TCGA_RNA-Seq FAM168B-ANKRD42 FAM168B chr2 131840150 - ANKRD42 chr11 82935897 + Exonic hg19 PRAD TCGA-XK-AAIV 4 29 In-Frame Inter-chr q21.1 q14.1 Seq+ 43705 ChimerSeq STARFusion TCGA_RNA-Seq MAT2B-SFXN1 MAT2B chr5 162932755 + SFXN1 chr5 174919098 + Exonic hg19 PRAD TCGA-XK-AAIV 3 14 CDS-5'UTR Intra-chr q34 q35.2 Seq+ 43706 ChimerSeq STARFusion TCGA_RNA-Seq MAT2B-SFXN1 MAT2B chr5 162930430 + SFXN1 chr5 174919098 + Exonic hg19 PRAD TCGA-XK-AAIV 2 14 CDS-5'UTR Intra-chr q34 q35.2 Seq+ 43707 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHF2-NDUFAF6 PLEKHF2 chr8 96146258 + NDUFAF6 chr8 96127764 + Exonic hg19 PRAD TCGA-XK-AAIV 3 10 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 43708 ChimerSeq STARFusion TCGA_RNA-Seq NTPCR-SMIM22 NTPCR chr1 233092189 + SMIM22 chr16 4844953 + Exonic hg19 PRAD TCGA-XK-AAIV 2 9 Out-of-frame Inter-chr q42.2 p13.3 Seq+ 43709 ChimerSeq STARFusion TCGA_RNA-Seq MTFR1-PEX2 MTFR1 chr8 66620246 + PEX2 chr8 77896431 - Exonic hg19 PRAD TCGA-XK-AAIV 2 3 CDS-5'UTR Intra-chr q13.1 q21.13 Seq+ 43710 ChimerSeq STARFusion TCGA_RNA-Seq EIF4ENIF1-C22orf24 EIF4ENIF1 chr22 31867830 - C22orf24 chr22 32330435 - Exonic hg19 PRAD TCGA-XK-AAIV 2 2 Out-of-frame Intra-chr q12.2 q12.3 Seq+ 43711 ChimerSeq STARFusion TCGA_RNA-Seq SREBF1-STAT3 SREBF1 chr17 17726832 - STAT3 chr17 40500557 - Exonic hg19 PRAD TCGA-VP-A87C 22 67 CDS-5'UTR Intra-chr p11.2 Transcription factor q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 43712 ChimerSeq STARFusion TCGA_RNA-Seq SREBF1-STAT3 SREBF1 chr17 17740041 - STAT3 chr17 40500557 - Exonic hg19 PRAD TCGA-VP-A87C 6 66 CDS-5'UTR Intra-chr p11.2 Transcription factor q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 43713 ChimerSeq STARFusion TCGA_RNA-Seq CADM1-SORL1 CADM1 chr11 115374989 - SORL1 chr11 121424646 + Exonic hg19 PRAD TCGA-CH-5739 3 11 In-Frame Intra-chr q23.3 Tumor suppressor gene q24.1 Seq+ 43714 ChimerSeq STARFusion TCGA_RNA-Seq ERG-PLEKHH1 ERG chr21 39947586 - PLEKHH1 chr14 68022542 + Exonic hg19 PRAD TCGA-CH-5739 2 10 In-Frame Inter-chr q22.2 Oncogene Transcription factor q24.1 Seq+ 43715 ChimerSeq STARFusion TCGA_RNA-Seq RTF1-EHD4 RTF1 chr15 41750074 + EHD4 chr15 42246138 - Exonic hg19 PRAD TCGA-CH-5739 2 7 In-Frame Intra-chr q15.1 q15.1 Seq+ 43716 ChimerSeq STARFusion TCGA_RNA-Seq HLCS-KIAA1755 HLCS chr21 38269160 - KIAA1755 chr20 36856642 - Exonic hg19 PRAD TCGA-CH-5739 2 6 In-Frame Inter-chr q22.13 q11.23 Seq+ 43717 ChimerSeq STARFusion TCGA_RNA-Seq OR51E2-AMACR OR51E2 chr11 4718883 - AMACR chr5 34006004 - Exonic hg19 PRAD TCGA-CH-5739 2 6 5'UTR-CDS Inter-chr p15.4 p13.2 Seq+ 43718 ChimerSeq STARFusion TCGA_RNA-Seq RTEL1-STMN3 RTEL1 chr20 62305446 + STMN3 chr20 62275662 - Exonic hg19 PRAD TCGA-G9-7510 26 50 In-Frame Intra-chr q13.33 q13.33 Seq+ 43719 ChimerSeq STARFusion TCGA_RNA-Seq RTEL1-STMN3 RTEL1 chr20 62305537 + STMN3 chr20 62275662 - Exonic hg19 PRAD TCGA-G9-7510 4 50 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 43720 ChimerSeq STARFusion TCGA_RNA-Seq VGLL3-RBMS3 VGLL3 chr3 87017740 - RBMS3 chr3 29628605 + Exonic hg19 PRAD TCGA-G9-7510 8 30 In-Frame Intra-chr p12.1 p24.1 Tumor suppressor gene Seq+ 43721 ChimerSeq STARFusion TCGA_RNA-Seq KLHL2-CPE KLHL2 chr4 166160051 + CPE chr4 166385542 + Exonic hg19 PRAD TCGA-G9-7510 2 20 Out-of-frame Intra-chr q32.3 q32.3 Seq+ 43722 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-DHX30 KANSL1 chr17 44270189 - DHX30 chr3 47891357 + Exonic hg19 PRAD TCGA-CH-5737 3 7 5'UTR-CDS Inter-chr p21.31 Seq+ 43723 ChimerSeq STARFusion TCGA_RNA-Seq IPO8-KRT86 IPO8 chr12 30837235 - KRT86 chr12 52702017 + Exonic hg19 PRAD TCGA-VP-A87D 52 95 In-Frame Intra-chr p11.21 q13.13 Seq+ 43724 ChimerSeq STARFusion TCGA_RNA-Seq C14orf37-KIR2DL1 C14orf37 chr14 58598230 - KIR2DL1 chr19 55290064 + Exonic hg19 PRAD TCGA-VP-A87D 12 40 In-Frame Inter-chr q23.1 Seq+ 43725 ChimerSeq STARFusion TCGA_RNA-Seq C14orf37-KIR2DL3 C14orf37 chr14 58598230 - KIR2DL3 chr19 55275343 + Exonic hg19 PRAD TCGA-VP-A87D 12 40 CDS-3'UTR Inter-chr q23.1 43726 ChimerSeq STARFusion TCGA_RNA-Seq C14orf37-KIR2DL1 C14orf37 chr14 58598230 - KIR2DL1 chr19 55258787 + Exonic hg19 PRAD TCGA-VP-A87D 8 40 CDS-5'UTR Inter-chr q23.1 Seq+ 43727 ChimerSeq STARFusion TCGA_RNA-Seq C14orf37-KIR2DL3 C14orf37 chr14 58598230 - KIR2DL3 chr19 55290064 + Exonic hg19 PRAD TCGA-VP-A87D 8 40 CDS-3'UTR Inter-chr q23.1 43728 ChimerSeq STARFusion TCGA_RNA-Seq GTF2E2-FBXO16 GTF2E2 chr8 30492549 - FBXO16 chr8 28286253 - Exonic hg19 PRAD TCGA-VP-A87D 7 20 Out-of-frame Intra-chr p12 p21.1 Seq+ 43729 ChimerSeq STARFusion TCGA_RNA-Seq TASP1-ESF1 TASP1 chr20 13610581 - ESF1 chr20 13714489 - Exonic hg19 PRAD TCGA-VP-A87D 7 18 In-Frame Intra-chr p12.1 p12.1 Seq+ 43730 ChimerSeq STARFusion TCGA_RNA-Seq C14orf37-KIR2DL3 C14orf37 chr14 58598230 - KIR2DL3 chr19 55258787 + Exonic hg19 PRAD TCGA-VP-A87D 3 27 In-Frame Inter-chr q23.1 43731 ChimerSeq STARFusion TCGA_RNA-Seq OCLN-CDK14 OCLN chr5 68809936 + CDK14 chr7 90836480 + Exonic hg19 PRAD TCGA-VP-A87D 4 18 CDS-3'UTR Inter-chr q13.2 q21.13 Seq+ 43732 ChimerSeq STARFusion TCGA_RNA-Seq OCLN-CDK14 OCLN chr5 68805646 + CDK14 chr7 90836480 + Exonic hg19 PRAD TCGA-VP-A87D 2 18 CDS-3'UTR Inter-chr q13.2 q21.13 Seq+ 43733 ChimerSeq STARFusion TCGA_RNA-Seq CYLD-FAM49B CYLD chr16 50776752 + FAM49B chr8 130983241 - Exonic hg19 PRAD TCGA-VP-A87D 3 5 5'UTR-3'UTR Inter-chr q12.1 Oncogene Tumor suppressor gene q24.21 Seq+ 43734 ChimerSeq STARFusion TCGA_RNA-Seq FBXO11-INTS9 FBXO11 chr2 48132628 - INTS9 chr8 28671129 - Exonic hg19 PRAD TCGA-VP-A87D 2 7 Out-of-frame Inter-chr p16.3 p21.1 Seq+ 43735 ChimerSeq STARFusion TCGA_RNA-Seq FKBP1A-CTDP1 FKBP1A chr20 1373478 - CTDP1 chr18 77455225 + Exonic hg19 PRAD TCGA-VP-A87D 2 6 Out-of-frame Inter-chr p13 Seq+ 43736 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-CACNA1I TMPRSS2 chr21 42842575 - CACNA1I chr22 39966737 + Exonic hg19 PRAD TCGA-V1-A9OA 6 18 CDS-5'UTR Inter-chr q22.3 q13.1 43737 ChimerSeq STARFusion TCGA_RNA-Seq HTT-WDR19 HTT chr4 3190820 + WDR19 chr4 39257468 + Exonic hg19 PRAD TCGA-V1-A9OL 30 85 In-Frame Intra-chr p16.3 p14 Seq+ 43738 ChimerSeq STARFusion TCGA_RNA-Seq UBE2G1-ZZEF1 UBE2G1 chr17 4269566 - ZZEF1 chr17 3928412 - Exonic hg19 PRAD TCGA-V1-A9OL 17 57 In-Frame Intra-chr p13.2 p13.2 43739 ChimerSeq STARFusion TCGA_RNA-Seq FAM110B-PREX2 FAM110B chr8 58907365 + PREX2 chr8 69103957 + Exonic hg19 PRAD TCGA-V1-A9OL 15 34 5'UTR-CDS Intra-chr q12.1 q13.2 Seq+ 43740 ChimerSeq STARFusion TCGA_RNA-Seq PREX2-FAM110B PREX2 chr8 69104760 + FAM110B chr8 59101877 + Exonic hg19 PRAD TCGA-V1-A9OL 9 34 CDS-3'UTR Intra-chr q13.2 q12.1 Seq+ 43741 ChimerSeq STARFusion TCGA_RNA-Seq UBE2G1-ZZEF1 UBE2G1 chr17 4269566 - ZZEF1 chr17 3926122 - Exonic hg19 PRAD TCGA-V1-A9OL 2 57 Out-of-frame Intra-chr p13.2 p13.2 43742 ChimerSeq STARFusion TCGA_RNA-Seq PREX2-FAM110B PREX2 chr8 69104760 + FAM110B chr8 59110390 + Exonic hg19 PRAD TCGA-V1-A9OL 3 34 CDS-3'UTR Intra-chr q13.2 q12.1 Seq+ 43743 ChimerSeq STARFusion TCGA_RNA-Seq DCP1A-HYAL3 DCP1A chr3 53319494 - HYAL3 chr3 50332793 - Exonic hg19 PRAD TCGA-V1-A9OL 7 15 Out-of-frame Intra-chr p21.1 p21.31 Seq+ 43744 ChimerSeq STARFusion TCGA_RNA-Seq PREX2-FAM110B PREX2 chr8 69104760 + FAM110B chr8 59116074 + Exonic hg19 PRAD TCGA-V1-A9OL 2 34 CDS-3'UTR Intra-chr q13.2 q12.1 Seq+ 43745 ChimerSeq STARFusion TCGA_RNA-Seq TMEM194A-SMARCC2 TMEM194A chr12 57456902 - SMARCC2 chr12 56568548 - Exonic hg19 PRAD TCGA-V1-A9OL 2 30 In-Frame Intra-chr q13.2 43746 ChimerSeq STARFusion TCGA_RNA-Seq DAB1-ITGB3BP DAB1 chr1 58971732 - ITGB3BP chr1 63920639 - Exonic hg19 PRAD TCGA-V1-A9OL 2 14 5'UTR-CDS Intra-chr p32.1 p31.3 Seq+ 43747 ChimerSeq STARFusion TCGA_RNA-Seq OMA1-ITGB3BP OMA1 chr1 58971732 - ITGB3BP chr1 63920639 - Exonic hg19 PRAD TCGA-V1-A9OL 2 14 Out-of-frame Intra-chr p32.1 p31.3 Seq+ 43748 ChimerSeq STARFusion TCGA_RNA-Seq ITGB3BP-TTC39A ITGB3BP chr1 63944435 - TTC39A chr1 51760183 - Exonic hg19 PRAD TCGA-V1-A9OL 2 8 In-Frame Intra-chr p31.3 p32.3 Seq+ 43749 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-SPZ1 MALAT1 chr11 65268285 + SPZ1 chr5 79615956 + Exonic hg19 PRAD TCGA-V1-A9OT 4 43 Out-of-frame Inter-chr q13.1 q14.1 Transcription factor Seq+ 43750 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-SPZ1 MALAT1 chr11 65272490 + SPZ1 chr5 79615956 + Exonic hg19 PRAD TCGA-V1-A9OT 3 43 Out-of-frame Inter-chr q13.1 q14.1 Transcription factor Seq+ 43751 ChimerSeq STARFusion TCGA_RNA-Seq GULP1-KCNJ13 GULP1 chr2 189348219 + KCNJ13 chr2 233636088 - Exonic hg19 PRAD TCGA-V1-A9OY 2 5 5'UTR-5'UTR Intra-chr q32.1 q37.1 Seq+ 43752 ChimerSeq STARFusion TCGA_RNA-Seq MLLT4-SYK MLLT4 chr6 168227917 + SYK chr9 93606140 + Exonic hg19 PRAD TCGA-V1-A9OY 2 4 CDS-5'UTR Inter-chr q22.2 TK:Syk Oncogene Tumor suppressor gene Seq+ 43753 ChimerSeq STARFusion TCGA_RNA-Seq TESC-ASAH1 TESC chr12 117537030 - ASAH1 chr8 17933096 - Exonic hg19 PRAD TCGA-YL-A9WJ 20 35 Out-of-frame Inter-chr q24.22 p22 Seq+ 43754 ChimerSeq STARFusion TCGA_RNA-Seq BCAT2-PLEKHA4 BCAT2 chr19 49300194 - PLEKHA4 chr19 49349103 - Exonic hg19 PRAD TCGA-YL-A9WJ 5 7 5'UTR-CDS Intra-chr q13.33 q13.33 43755 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-GRB7 FBXL20 chr17 37557614 - GRB7 chr17 37898505 + Exonic hg19 READ TCGA-AF-A56L 99 272 Out-of-frame Intra-chr q12 q12 Seq+ 43756 ChimerSeq STARFusion TCGA_RNA-Seq TNS4-FBXL20 TNS4 chr17 38657786 - FBXL20 chr17 37499494 - Exonic hg19 READ TCGA-AF-A56L 91 278 5'UTR-CDS Intra-chr q21.2 q12 Seq+ 43757 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-GRB7 FBXL20 chr17 37558426 - GRB7 chr17 37898505 + Exonic hg19 READ TCGA-AF-A56L 63 271 5'UTR-5'UTR Intra-chr q12 q12 Seq+ 43758 ChimerSeq STARFusion TCGA_RNA-Seq TOP2A-IKZF3 TOP2A chr17 38567361 - IKZF3 chr17 37922746 - Exonic hg19 READ TCGA-AF-A56L 45 238 Out-of-frame Intra-chr q21.2 q21.1 Tumor suppressor gene Transcription factor Seq+ 43759 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-CDK12 GRB7 chr17 37902455 + CDK12 chr17 37700502 + Exonic hg19 READ TCGA-AF-A56L 29 177 CDS-3'UTR Intra-chr q12 q12 Oncogene Seq+ 43760 ChimerSeq STARFusion TCGA_RNA-Seq CPNE1-MROH8 CPNE1 chr20 34252682 - MROH8 chr20 35776312 - Exonic hg19 READ TCGA-AF-A56L 24 63 Out-of-frame Intra-chr q11.22 q11.23 Seq+ 43761 ChimerSeq STARFusion TCGA_RNA-Seq RBM12-MROH8 RBM12 chr20 34252682 - MROH8 chr20 35776312 - Exonic hg19 READ TCGA-AF-A56L 24 63 Out-of-frame Intra-chr q11.22 q11.23 Seq+ 43762 ChimerSeq STARFusion TCGA_RNA-Seq CPNE1-MROH8 CPNE1 chr20 34252724 - MROH8 chr20 35776312 - Exonic hg19 READ TCGA-AF-A56L 9 63 Out-of-frame Intra-chr q11.22 q11.23 Seq+ 43763 ChimerSeq STARFusion TCGA_RNA-Seq RBM12-MROH8 RBM12 chr20 34252724 - MROH8 chr20 35776312 - Exonic hg19 READ TCGA-AF-A56L 9 63 Out-of-frame Intra-chr q11.22 q11.23 Seq+ 43764 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D16-GOSR2 TBC1D16 chr17 77983959 - GOSR2 chr17 45006886 + Exonic hg19 READ TCGA-AF-A56L 4 49 In-Frame Intra-chr q25.3 q21.32 Seq+ 43765 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-CACNB1 WIPF2 chr17 38375744 + CACNB1 chr17 37343854 - Exonic hg19 READ TCGA-AF-A56L 5 20 5'UTR-CDS Intra-chr q21.2 q12 Seq+ 43766 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-KRT17 WIPF2 chr17 38375744 + KRT17 chr17 39778763 - Exonic hg19 READ TCGA-AF-A56L 6 12 5'UTR-CDS Intra-chr q21.2 q21.2 43767 ChimerSeq STARFusion TCGA_RNA-Seq SMPD3-ATP6V0D1 SMPD3 chr16 68397399 - ATP6V0D1 chr16 67473254 - Exonic hg19 READ TCGA-AF-A56L 5 14 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 43768 ChimerSeq STARFusion TCGA_RNA-Seq USP34-LINC00452 USP34 chr2 61647881 - LINC00452 chr13 114601499 + Exonic hg19 READ TCGA-DC-6154 11 50 Out-of-frame Inter-chr p15 q34 43769 ChimerSeq STARFusion TCGA_RNA-Seq PAN3-LATS2 PAN3 chr13 28713224 + LATS2 chr13 21557945 - Exonic hg19 READ TCGA-DC-6154 11 17 Out-of-frame Intra-chr q12.2 q12.11 AGC:NDR Tumor suppressor gene Seq+ 43770 ChimerSeq STARFusion TCGA_RNA-Seq PAN3-KATNAL1 PAN3 chr13 28752072 + KATNAL1 chr13 30857928 - Exonic hg19 READ TCGA-DC-6154 7 8 CDS-5'UTR Intra-chr q12.2 q12.3 Seq+ 43771 ChimerSeq STARFusion TCGA_RNA-Seq KMT2C-LMTK3 KMT2C chr7 151845118 - LMTK3 chr19 48997366 - Exonic hg19 READ TCGA-DC-6154 3 10 Out-of-frame Inter-chr q36.1 Oncogene Tumor suppressor gene q13.33 Seq+ 43772 ChimerSeq STARFusion TCGA_RNA-Seq SPATA13-TNFRSF19 SPATA13 chr13 24735071 + TNFRSF19 chr13 24164289 + Exonic hg19 READ TCGA-DC-4745 37 144 5'UTR-5'UTR Intra-chr q12.12 q12.12 Seq+ 43773 ChimerSeq STARFusion TCGA_RNA-Seq SPATA13-TNFRSF19 SPATA13 chr13 24735071 + TNFRSF19 chr13 24190006 + Exonic hg19 READ TCGA-DC-4745 5 139 5'UTR-5'UTR Intra-chr q12.12 q12.12 Seq+ 43774 ChimerSeq STARFusion TCGA_RNA-Seq TTC3-CBS TTC3 chr21 38445773 + CBS chr21 44493451 - Exonic hg19 READ TCGA-DC-4745 7 17 5'UTR-5'UTR Intra-chr q22.13 q22.3 Seq+ 43775 ChimerSeq STARFusion TCGA_RNA-Seq APP-TSPEAR APP chr21 27326904 - TSPEAR chr21 45987889 - Exonic hg19 READ TCGA-DC-4745 4 5 In-Frame Intra-chr q21.3 q22.3 Seq+ 43776 ChimerSeq STARFusion TCGA_RNA-Seq FCGBP-SURF4 FCGBP chr19 40368841 - SURF4 chr9 136242900 - Exonic hg19 READ TCGA-AG-A008 4 0 Out-of-frame Inter-chr 43777 ChimerSeq STARFusion TCGA_RNA-Seq ALDH2-NCL ALDH2 chr12 112221080 + NCL chr2 232322436 - Exonic hg19 READ TCGA-AG-A008 3 0 Out-of-frame Inter-chr q24.12 q37.1 43778 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31802768 + C2 chr6 31868874 + Exonic hg19 READ TCGA-AG-A008 3 0 Out-of-frame Intra-chr p21.33 43779 ChimerSeq STARFusion TCGA_RNA-Seq EIF3D-TYRO3 EIF3D chr22 36906996 - TYRO3 chr15 41854865 + Exonic hg19 READ TCGA-AG-A008 3 0 Out-of-frame Inter-chr q12.3 q15.1 TK:Axl 43780 ChimerSeq STARFusion TCGA_RNA-Seq RPL36-CYBA RPL36 chr19 5691595 + CYBA chr16 88709927 - Exonic hg19 READ TCGA-AG-A008 3 0 Out-of-frame Inter-chr p13.3 q24.2 43781 ChimerSeq STARFusion TCGA_RNA-Seq RPS27-FAM159B RPS27 chr1 153963699 + FAM159B chr5 63986324 + Exonic hg19 READ TCGA-AG-A008 3 0 3'UTR-5'UTR Inter-chr q21.3 q12.3 43782 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868872 - SLC44A4 chr6 31831432 - Exonic hg19 READ TCGA-AG-A008 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 43783 ChimerSeq STARFusion TCGA_RNA-Seq ZNF44-LCN2 ZNF44 chr19 12337183 - LCN2 chr9 130912542 + Exonic hg19 READ TCGA-AG-A008 3 0 Out-of-frame Inter-chr p13.2 Transcription factor q34.11 43784 ChimerSeq STARFusion TCGA_RNA-Seq RUNX1-LINC00160 RUNX1 chr21 36252854 - LINC00160 chr21 36107053 - Exonic hg19 READ TCGA-F5-6863 5 37 CDS-5'UTR Intra-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q22.12 43785 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 READ TCGA-AG-3728 8 0 Out-of-frame Inter-chr p22.1 43786 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31802768 + C2 chr6 31868874 + Exonic hg19 READ TCGA-AG-3728 5 0 Out-of-frame Intra-chr p21.33 43787 ChimerSeq STARFusion TCGA_RNA-Seq RLBP1-IFITM1 RLBP1 chr15 89754987 - IFITM1 chr11 314942 + Exonic hg19 READ TCGA-AG-3728 5 0 Out-of-frame Inter-chr q26.1 p15.5 Oncogene 43788 ChimerSeq STARFusion TCGA_RNA-Seq RLBP1-IFITM2 RLBP1 chr15 89754987 - IFITM2 chr11 309033 + Exonic hg19 READ TCGA-AG-3728 5 0 Out-of-frame Inter-chr q26.1 p15.5 43789 ChimerSeq STARFusion TCGA_RNA-Seq ALDH2-CLIC1 ALDH2 chr12 112221082 + CLIC1 chr6 31698653 - Exonic hg19 READ TCGA-AG-3728 4 0 Out-of-frame Inter-chr q24.12 43790 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31802925 + C2 chr6 31868874 + Exonic hg19 READ TCGA-AG-3728 4 0 Out-of-frame Intra-chr p21.33 43791 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1107-RPL13A KIAA1107 chr1 92633440 + RPL13A chr19 49995374 + Exonic hg19 READ TCGA-AG-3728 4 0 Out-of-frame Inter-chr p22.1 q13.33 43792 ChimerSeq STARFusion TCGA_RNA-Seq RPS9-HNRNPUL1 RPS9 chr19 54705058 + HNRNPUL1 chr19 41782087 + Exonic hg19 READ TCGA-AG-3728 4 0 Out-of-frame Intra-chr q13.2 43793 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868872 - SLC44A4 chr6 31838729 - Exonic hg19 READ TCGA-AG-3728 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 43794 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868873 - SLC44A4 chr6 31831413 - Exonic hg19 READ TCGA-AG-3728 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 43795 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31832836 - Exonic hg19 READ TCGA-AG-3728 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 43796 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868869 - SLC44A4 chr6 31833903 - Exonic hg19 READ TCGA-AG-3728 4 0 In-Frame Intra-chr p21.33 Transcription factor 43797 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-VARS ZBTB12 chr6 31868872 - VARS chr6 31747547 - Exonic hg19 READ TCGA-AG-3728 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 43798 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31802948 + C2 chr6 31868873 + Exonic hg19 READ TCGA-AG-3728 3 0 Out-of-frame Intra-chr p21.33 43799 ChimerSeq STARFusion TCGA_RNA-Seq EPHB3-ACKR3 EPHB3 chr3 184300035 + ACKR3 chr2 237478330 + Exonic hg19 READ TCGA-AG-3728 3 0 Out-of-frame Inter-chr q27.1 Tumor suppressor gene q37.3 43800 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106209411 - Exonic hg19 READ TCGA-AG-3728 3 0 Out-of-frame Inter-chr q21.2 32.33 43801 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076851 + IGHG1 chr14 106209411 - Exonic hg19 READ TCGA-AG-3728 3 0 Out-of-frame Inter-chr q21.2 q32.33 43802 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-GRM3 IGL@ chr22 22764597 + GRM3 chr7 86479713 + Exonic hg19 READ TCGA-AG-3728 3 0 Out-of-frame Inter-chr q11.22 q21.11 43803 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1107-IGBP1 KIAA1107 chr1 92633439 + IGBP1 chrX 69366507 + Exonic hg19 READ TCGA-AG-3728 3 0 Out-of-frame Inter-chr p22.1 q13.1 43804 ChimerSeq STARFusion TCGA_RNA-Seq LCMT1-IGL@ LCMT1 chr16 25180512 + IGL@ chr22 23248675 + Exonic hg19 READ TCGA-AG-3728 3 0 Out-of-frame Inter-chr p12.1 q11.22 43805 ChimerSeq STARFusion TCGA_RNA-Seq LCMT1-IGLC2 LCMT1 chr16 25180512 + IGLC2 chr22 23243319 + Exonic hg19 READ TCGA-AG-3728 3 0 Out-of-frame Inter-chr p12.1 q11.22 43806 ChimerSeq STARFusion TCGA_RNA-Seq LINC00987-CAMK2N1 LINC00987 chr12 9392729 + CAMK2N1 chr1 20812693 - Exonic hg19 READ TCGA-AG-3728 3 0 Out-of-frame Inter-chr p13.31 p36.12 Tumor suppressor gene 43807 ChimerSeq STARFusion TCGA_RNA-Seq PYROXD1-RPS9 PYROXD1 chr12 21590946 + RPS9 chr19 54705034 + Exonic hg19 READ TCGA-AG-3728 3 0 Out-of-frame Inter-chr p12.1 43808 ChimerSeq STARFusion TCGA_RNA-Seq RNA5SP92-EEF1A1 RNA5SP92 chr2 33558018 + EEF1A1 chr6 74229184 - Exonic hg19 READ TCGA-AG-3728 3 0 Out-of-frame Inter-chr p22.3 q13 Tumor suppressor gene 43809 ChimerSeq STARFusion TCGA_RNA-Seq RPS21-ETV5 RPS21 chr20 60962952 + ETV5 chr3 185826703 - Exonic hg19 READ TCGA-AG-3728 3 0 Out-of-frame Inter-chr q13.33 q27.2 Oncogene Transcription factor 43810 ChimerSeq STARFusion TCGA_RNA-Seq RPS8-ETV5 RPS8 chr1 45241743 + ETV5 chr3 185826703 - Exonic hg19 READ TCGA-AG-3728 3 0 Out-of-frame Inter-chr p34.1 q27.2 Oncogene Transcription factor 43811 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-HSPA1A ZBTB12 chr6 31868874 - HSPA1A chr6 31784320 + Exonic hg19 READ TCGA-AG-3728 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 43812 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-HSPA1A ZBTB12 chr6 31868874 - HSPA1A chr6 31783597 + Exonic hg19 READ TCGA-AG-3728 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 43813 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-NELFE ZBTB12 chr6 31868874 - NELFE chr6 31922357 - Exonic hg19 READ TCGA-AG-3728 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 43814 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-NEU1 ZBTB12 chr6 31868873 - NEU1 chr6 31829921 - Exonic hg19 READ TCGA-AG-3728 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 43815 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31833130 - Exonic hg19 READ TCGA-AG-3728 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 43816 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31831394 - Exonic hg19 READ TCGA-AG-3728 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 43817 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-VARS ZBTB12 chr6 31868870 - VARS chr6 31749675 - Exonic hg19 READ TCGA-AG-3728 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 43818 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-EEF1A1 ZSWIM4 chr19 13942626 + EEF1A1 chr6 74229736 - Exonic hg19 READ TCGA-AG-3728 3 0 Out-of-frame Inter-chr p13.13 q13 Tumor suppressor gene 43819 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 READ TCGA-AG-A01W 4 0 Out-of-frame Inter-chr p22.1 43820 ChimerSeq STARFusion TCGA_RNA-Seq CAB39-PSMD1 CAB39 chr2 231624830 + PSMD1 chr2 232003450 + Exonic hg19 READ TCGA-AF-2687 8 45 Out-of-frame Intra-chr q37.1 q37.1 Seq+ 43821 ChimerSeq STARFusion TCGA_RNA-Seq CAB39-PSMD1 CAB39 chr2 231624830 + PSMD1 chr2 232010954 + Exonic hg19 READ TCGA-AF-2687 5 45 In-Frame Intra-chr q37.1 q37.1 Seq+ 43822 ChimerSeq STARFusion TCGA_RNA-Seq TMSB10-HAP1 TMSB10 chr2 85133241 + HAP1 chr17 39877727 - Exonic hg19 READ TCGA-AF-2687 7 3 CDS-3'UTR Inter-chr p11.2 q21.2 43823 ChimerSeq STARFusion TCGA_RNA-Seq RSPO1-IGF2 RSPO1 chr1 38077353 - IGF2 chr11 2151403 - Exonic hg19 READ TCGA-AG-3727 3 0 Out-of-frame Inter-chr p34.3 p15.5 Oncogene 43824 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-EEF1A1 ZSWIM4 chr19 13942623 + EEF1A1 chr6 74229229 - Exonic hg19 READ TCGA-AG-3727 3 0 Out-of-frame Inter-chr p13.13 q13 Tumor suppressor gene 43825 ChimerSeq STARFusion TCGA_RNA-Seq CLTA-PKP3 CLTA chr9 36191214 + PKP3 chr11 397063 + Exonic hg19 READ TCGA-AG-3726 5 0 Out-of-frame Inter-chr p13.3 p15.5 43826 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 READ TCGA-AG-3609 4 0 Out-of-frame Inter-chr p13.13 q13.1 43827 ChimerSeq STARFusion TCGA_RNA-Seq ACIN1-RPL28 ACIN1 chr14 23564688 - RPL28 chr19 55899687 + Exonic hg19 READ TCGA-AG-3609 3 0 Out-of-frame Inter-chr q11.2 q13.42 43828 ChimerSeq STARFusion TCGA_RNA-Seq AIF1L-RPL13AP7 AIF1L chr9 133995770 + RPL13AP7 chr21 26734505 + Exonic hg19 READ TCGA-AG-3609 3 0 Out-of-frame Inter-chr q34.12 q21.2 43829 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31805168 + C2 chr6 31868874 + Exonic hg19 READ TCGA-AG-3609 3 0 Out-of-frame Intra-chr p21.33 43830 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC10-RPL31P50 DNAJC10 chr2 183653145 + RPL31P50 chr12 31750085 - Exonic hg19 READ TCGA-AG-3609 3 0 Out-of-frame Inter-chr q32.1 p11.21 43831 ChimerSeq STARFusion TCGA_RNA-Seq RNA5SP92-EEF1A1 RNA5SP92 chr2 33558018 + EEF1A1 chr6 74229184 - Exonic hg19 READ TCGA-AG-3609 3 0 Out-of-frame Inter-chr p22.3 q13 Tumor suppressor gene 43832 ChimerSeq STARFusion TCGA_RNA-Seq DPEP1-TCF25 DPEP1 chr16 89680127 + TCF25 chr16 89976999 + Exonic hg19 READ TCGA-CI-6622 4 10 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 43833 ChimerSeq STARFusion TCGA_RNA-Seq DPEP1-TCF25 DPEP1 chr16 89696922 + TCF25 chr16 89976999 + Exonic hg19 READ TCGA-CI-6622 4 10 In-Frame Intra-chr q24.3 q24.3 Seq+ 43834 ChimerSeq STARFusion TCGA_RNA-Seq RPLP0P2-IAH1 RPLP0P2 chr11 61404990 + IAH1 chr2 9614657 + Exonic hg19 READ TCGA-AG-3600 3 0 Out-of-frame Inter-chr q12.2 p25.1 43835 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-HM13 TPX2 chr20 30330450 + HM13 chr20 30115287 + Exonic hg19 READ TCGA-AG-A01N 7 0 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 43836 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP26-RALY ARHGAP26 chr5 142596331 + RALY chr20 32664829 + Exonic hg19 READ TCGA-AG-A01N 4 0 Out-of-frame Inter-chr q31.3 q11.22 43837 ChimerSeq STARFusion TCGA_RNA-Seq TTI1-AAR2 TTI1 chr20 36631030 - AAR2 chr20 34843500 + Exonic hg19 READ TCGA-AG-A01N 4 0 Out-of-frame Intra-chr q11.23 q11.23 43838 ChimerSeq STARFusion TCGA_RNA-Seq TOX3-CASC16 TOX3 chr16 52479906 - CASC16 chr16 52596774 - Exonic hg19 READ TCGA-F5-6814 58 300 Out-of-frame Intra-chr q12.1 q12.2 Seq+ 43839 ChimerSeq STARFusion TCGA_RNA-Seq TOX3-CASC16 TOX3 chr16 52479906 - CASC16 chr16 52586346 - Exonic hg19 READ TCGA-F5-6814 13 295 Out-of-frame Intra-chr q12.1 q12.2 Seq+ 43840 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF1-RPS19 ARHGEF1 chr19 42397374 + RPS19 chr19 42373101 + Exonic hg19 READ TCGA-F5-6814 22 85 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 43841 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF1-RPS19 ARHGEF1 chr19 42397374 + RPS19 chr19 42367941 + Exonic hg19 READ TCGA-F5-6814 3 80 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 43842 ChimerSeq STARFusion TCGA_RNA-Seq KPNA6-TMEM39B KPNA6 chr1 32573735 + TMEM39B chr1 32566043 + Exonic hg19 READ TCGA-F5-6814 11 39 Out-of-frame Intra-chr p35.2 p35.2 Seq+ 43843 ChimerSeq STARFusion TCGA_RNA-Seq RNF130-MGAT4B RNF130 chr5 179467453 - MGAT4B chr5 179226636 - Exonic hg19 READ TCGA-F5-6814 9 26 In-Frame Intra-chr q35.3 Seq+ 43844 ChimerSeq STARFusion TCGA_RNA-Seq SRP72P1-ARL9 SRP72P1 chr18 47021540 - ARL9 chr4 57377351 + Exonic hg19 READ TCGA-F5-6814 14 0 Out-of-frame Inter-chr q12 43845 ChimerSeq STARFusion TCGA_RNA-Seq PLXNB2-DENND6B PLXNB2 chr22 50733148 - DENND6B chr22 50757432 - Exonic hg19 READ TCGA-F5-6814 2 7 Out-of-frame Intra-chr q13.33 q13.33 43846 ChimerSeq STARFusion TCGA_RNA-Seq PLCXD1-IGHG2 PLCXD1 chrX 209756 + IGHG2 chr14 106111129 - Exonic hg19 READ TCGA-AG-A015 4 0 Out-of-frame Inter-chr p22.33 43847 ChimerSeq STARFusion TCGA_RNA-Seq ZNF714-STAP2 ZNF714 chr19 21266875 + STAP2 chr19 4338941 - Exonic hg19 READ TCGA-DY-A1DF 17 53 5'UTR-5'UTR Intra-chr p12 Transcription factor p13.3 Seq+ 43848 ChimerSeq STARFusion TCGA_RNA-Seq PRR12-SYMPK PRR12 chr19 50119476 + SYMPK chr19 46357765 - Exonic hg19 READ TCGA-DY-A1DF 8 24 CDS-5'UTR Intra-chr q13.33 Transcription factor q13.32 Seq+ 43849 ChimerSeq STARFusion TCGA_RNA-Seq DSC2-GATA6 DSC2 chr18 28681866 - GATA6 chr18 19780619 + Exonic hg19 READ TCGA-AG-A016 5 0 In-Frame Intra-chr q12.1 Tumor suppressor gene q11.2 Transcription factor 43850 ChimerSeq STARFusion TCGA_RNA-Seq EIF3C-SRM EIF3C chr16 28743195 + SRM chr1 11114732 - Exonic hg19 READ TCGA-AG-A016 3 0 Out-of-frame Inter-chr p11.2 p36.22 TK:Src 43851 ChimerSeq STARFusion TCGA_RNA-Seq GPX1P1-SP8 GPX1P1 chrX 13397444 - SP8 chr7 20824974 - Exonic hg19 READ TCGA-AG-A016 3 0 Out-of-frame Inter-chr p22.2 p21.1 Transcription factor 43852 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL671P-HCG4P7 RN7SL671P chr4 1870886 - HCG4P7 chr6 29855588 - Exonic hg19 READ TCGA-AG-A016 3 0 Out-of-frame Inter-chr 43853 ChimerSeq STARFusion TCGA_RNA-Seq BEST1-LCN2 BEST1 chr11 61732869 + LCN2 chr9 130911741 + Exonic hg19 READ TCGA-AG-A011 3 0 Out-of-frame Inter-chr q12.3 q34.11 43854 ChimerSeq STARFusion TCGA_RNA-Seq FTL-ZNF536 FTL chr19 49469662 + ZNF536 chr19 31039216 + Exonic hg19 READ TCGA-AG-3598 12 0 Out-of-frame Intra-chr q13.33 q12 Transcription factor 43855 ChimerSeq STARFusion TCGA_RNA-Seq RPL12-FAM159B RPL12 chr9 130210161 - FAM159B chr5 63986325 + Exonic hg19 READ TCGA-AG-3598 4 0 Out-of-frame Inter-chr q33.3 q12.3 43856 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD6-PSAP ANKRD6 chr6 90272273 + PSAP chr10 73580042 - Exonic hg19 READ TCGA-AG-3598 3 0 Out-of-frame Inter-chr q15 q22.1 43857 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31802769 + C2 chr6 31868874 + Exonic hg19 READ TCGA-AG-3598 3 0 Out-of-frame Intra-chr p21.33 43858 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31807416 + C2 chr6 31868874 + Exonic hg19 READ TCGA-AG-3598 3 0 Out-of-frame Intra-chr p21.33 43859 ChimerSeq STARFusion TCGA_RNA-Seq EEF1G-SEZ6L EEF1G chr11 62334393 - SEZ6L chr22 26688199 + Exonic hg19 READ TCGA-AG-3598 3 0 Out-of-frame Inter-chr q12.3 q12.1 43860 ChimerSeq STARFusion TCGA_RNA-Seq RPL22-PDE6A RPL22 chr1 6257713 - PDE6A chr5 149246804 - Exonic hg19 READ TCGA-AG-3598 3 0 Out-of-frame Inter-chr p36.31 q32 43861 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 READ TCGA-AG-3598 3 0 Out-of-frame Inter-chr p13.13 q13.1 43862 ChimerSeq STARFusion TCGA_RNA-Seq RHOA-EMC3 RHOA chr3 49405861 - EMC3 chr3 10011485 - Exonic hg19 READ TCGA-EI-6510 212 638 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene p25.3 Seq+ 43863 ChimerSeq STARFusion TCGA_RNA-Seq EMC3-RHOA EMC3 chr3 10012266 - RHOA chr3 49400059 - Exonic hg19 READ TCGA-EI-6510 157 408 Out-of-frame Intra-chr p25.3 p21.31 Oncogene Tumor suppressor gene Seq+ 43864 ChimerSeq STARFusion TCGA_RNA-Seq CD2AP-SLC25A13 CD2AP chr6 47501491 + SLC25A13 chr7 95800836 - Exonic hg19 READ TCGA-EI-6510 37 94 In-Frame Inter-chr p12.3 q21.3 Seq+ 43865 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-IGKC ACTB chr7 5568054 - IGKC chr2 89160435 - Exonic hg19 READ TCGA-EI-6510 6 1 Out-of-frame Inter-chr p22.1 p11.2 43866 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A13-CD2AP SLC25A13 chr7 95813589 - CD2AP chr6 47512342 + Exonic hg19 READ TCGA-EI-6510 2 17 In-Frame Inter-chr q21.3 p12.3 Seq+ 43867 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128505577 - RSPO3 chr6 127469793 + Exonic hg19 READ TCGA-G5-6233 17 85 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 43868 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD17-RPL9P8 ANKRD17 chr4 74123992 - RPL9P8 chr15 83041374 - Exonic hg19 READ TCGA-G5-6233 15 79 Out-of-frame Inter-chr q13.3 43869 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128841404 - RSPO3 chr6 127469793 + Exonic hg19 READ TCGA-DT-5265 6 27 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 43870 ChimerSeq STARFusion TCGA_RNA-Seq SHANK2-SYT7 SHANK2 chr11 70935743 - SYT7 chr11 61323679 - Exonic hg19 READ TCGA-DT-5265 4 3 5'UTR-CDS Intra-chr q13.4 q12.2 Seq+ 43871 ChimerSeq STARFusion TCGA_RNA-Seq PRSS27-TPSB2 PRSS27 chr16 2763530 - TPSB2 chr16 1278814 - Exonic hg19 READ TCGA-AF-2690 20 9 In-Frame Intra-chr p13.3 p13.3 43872 ChimerSeq STARFusion TCGA_RNA-Seq MPP5-CEP128 MPP5 chr14 67736500 + CEP128 chr14 81046767 - Exonic hg19 READ TCGA-AF-2690 5 16 5'UTR-CDS Intra-chr q23.3 q31.1 Seq+ 43873 ChimerSeq STARFusion TCGA_RNA-Seq UBE4A-INSC UBE4A chr11 118252238 + INSC chr11 15197287 + Exonic hg19 READ TCGA-AF-2690 2 9 In-Frame Intra-chr q23.3 p15.2 Seq+ 43874 ChimerSeq STARFusion TCGA_RNA-Seq PTPRF-DHRS4L2 PTPRF chr1 44064584 + DHRS4L2 chr14 24464241 + Exonic hg19 READ TCGA-AF-2693 19 63 In-Frame Inter-chr p34.2 q11.2 Seq+ 43875 ChimerSeq STARFusion TCGA_RNA-Seq PTPRF-DHRS4L2 PTPRF chr1 44064584 + DHRS4L2 chr14 24429111 + Exonic hg19 READ TCGA-AF-2693 9 61 CDS-5'UTR Inter-chr p34.2 q11.2 Seq+ 43876 ChimerSeq STARFusion TCGA_RNA-Seq LRCH1-NUDT15 LRCH1 chr13 47127838 + NUDT15 chr13 48615056 + Exonic hg19 READ TCGA-AF-2693 8 7 Out-of-frame Intra-chr q14.13 q14.2 Seq+ 43877 ChimerSeq STARFusion TCGA_RNA-Seq NPLOC4-ALYREF NPLOC4 chr17 79589192 - ALYREF chr17 79846021 - Exonic hg19 READ TCGA-AF-6655 2 12 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 43878 ChimerSeq STARFusion TCGA_RNA-Seq ACTG1-HCG18 ACTG1 chr17 79478381 - HCG18 chr6 30256989 - Exonic hg19 READ TCGA-AG-A00H 3 0 Out-of-frame Inter-chr q25.3 43879 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC10-RPL31P50 DNAJC10 chr2 183653145 + RPL31P50 chr12 31750085 - Exonic hg19 READ TCGA-AG-A00H 3 0 Out-of-frame Inter-chr q32.1 p11.21 43880 ChimerSeq STARFusion TCGA_RNA-Seq HSPA1B-C2 HSPA1B chr6 31796806 + C2 chr6 31868873 + Exonic hg19 READ TCGA-AG-A00H 3 0 Out-of-frame Intra-chr p21.33 43881 ChimerSeq STARFusion TCGA_RNA-Seq PI4KA-BCAT1 PI4KA chr22 21212858 - BCAT1 chr12 25054819 - Exonic hg19 READ TCGA-AG-3999 6 0 In-Frame Inter-chr q11.21 p12.1 Seq+ 43882 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1671-MAPK1 KIAA1671 chr22 25348739 + MAPK1 chr22 22162135 - Exonic hg19 READ TCGA-AG-3999 3 0 5'UTR-CDS Intra-chr q11.23 q11.22 Oncogene 43883 ChimerSeq STARFusion TCGA_RNA-Seq TPST2-KLHL22 TPST2 chr22 26986017 - KLHL22 chr22 20812287 - Exonic hg19 READ TCGA-AG-3999 3 0 5'UTR-CDS Intra-chr q12.1 q11.21 43884 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC10-RPL31P50 DNAJC10 chr2 183653145 + RPL31P50 chr12 31750085 - Exonic hg19 READ TCGA-AG-3611 6 0 Out-of-frame Inter-chr q32.1 p11.21 43885 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF18-TTTY16 ARHGEF18 chr19 7460133 + TTTY16 chrY 7567528 - Exonic hg19 READ TCGA-AG-3611 5 0 5'UTR-3'UTR Inter-chr p13.2 p11.2 43886 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31802768 + C2 chr6 31868874 + Exonic hg19 READ TCGA-AG-3611 5 0 Out-of-frame Intra-chr p21.33 43887 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF18-RFTN1P1 ARHGEF18 chr19 7460133 + RFTN1P1 chrY 7581138 - Exonic hg19 READ TCGA-AG-3611 4 0 Out-of-frame Inter-chr p13.2 p11.2 43888 ChimerSeq STARFusion TCGA_RNA-Seq GAPDH-PDE6A GAPDH chr12 6646176 + PDE6A chr5 149246803 - Exonic hg19 READ TCGA-AG-3611 4 0 Out-of-frame Inter-chr p13.31 q32 43889 ChimerSeq STARFusion TCGA_RNA-Seq ABHD11-RPL35 ABHD11 chr7 73152823 - RPL35 chr9 127620282 - Exonic hg19 READ TCGA-AG-3611 3 0 Out-of-frame Inter-chr q11.23 q33.3 43890 ChimerSeq STARFusion TCGA_RNA-Seq EDF1-FAM159B EDF1 chr9 139757358 - FAM159B chr5 63986324 + Exonic hg19 READ TCGA-AG-3611 3 0 CDS-5'UTR Inter-chr q34.3 q12.3 43891 ChimerSeq STARFusion TCGA_RNA-Seq GPATCH8-EZH1 GPATCH8 chr17 42580694 - EZH1 chr17 40882936 - Exonic hg19 READ TCGA-AG-3611 3 0 CDS-5'UTR Intra-chr q21.31 q21.2 Tumor suppressor gene 43892 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-TYRO3 IGKC chr2 89156966 - TYRO3 chr15 41854865 + Exonic hg19 READ TCGA-AG-3611 3 0 Out-of-frame Inter-chr p11.2 q15.1 TK:Axl 43893 ChimerSeq STARFusion TCGA_RNA-Seq RLBP1-IFITM1 RLBP1 chr15 89754987 - IFITM1 chr11 314942 + Exonic hg19 READ TCGA-AG-3611 3 0 Out-of-frame Inter-chr q26.1 p15.5 Oncogene 43894 ChimerSeq STARFusion TCGA_RNA-Seq RLBP1-IFITM2 RLBP1 chr15 89754987 - IFITM2 chr11 309033 + Exonic hg19 READ TCGA-AG-3611 3 0 Out-of-frame Inter-chr q26.1 p15.5 43895 ChimerSeq STARFusion TCGA_RNA-Seq RNA5SP92-EEF1A1 RNA5SP92 chr2 33558018 + EEF1A1 chr6 74229184 - Exonic hg19 READ TCGA-AG-3611 3 0 Out-of-frame Inter-chr p22.3 q13 Tumor suppressor gene 43896 ChimerSeq STARFusion TCGA_RNA-Seq RPL27-CCDC57 RPL27 chr17 41154760 + CCDC57 chr17 80086381 - Exonic hg19 READ TCGA-AG-3611 3 0 Out-of-frame Intra-chr q21.31 q25.3 43897 ChimerSeq STARFusion TCGA_RNA-Seq ZNF44-LCN2 ZNF44 chr19 12337183 - LCN2 chr9 130912542 + Exonic hg19 READ TCGA-AG-3611 3 0 Out-of-frame Inter-chr p13.2 Transcription factor q34.11 43898 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 READ TCGA-AG-3611 3 0 Out-of-frame Inter-chr p13.13 q13.1 43899 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31802768 + C2 chr6 31868874 + Exonic hg19 READ TCGA-AG-A00C 3 0 Out-of-frame Intra-chr p21.33 43900 ChimerSeq STARFusion TCGA_RNA-Seq EEF1G-SEZ6L EEF1G chr11 62334393 - SEZ6L chr22 26688199 + Exonic hg19 READ TCGA-AG-A00C 3 0 Out-of-frame Inter-chr q12.3 q12.1 43901 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1107-PPDPF KIAA1107 chr1 92633439 + PPDPF chr20 62153106 + Exonic hg19 READ TCGA-AG-A00C 3 0 Out-of-frame Inter-chr p22.1 q13.33 43902 ChimerSeq STARFusion TCGA_RNA-Seq RPL9-UFM1 RPL9 chr4 39458057 - UFM1 chr13 38935764 + Exonic hg19 READ TCGA-AG-A00C 3 0 Out-of-frame Inter-chr p14 q13.3 43903 ChimerSeq STARFusion TCGA_RNA-Seq RPS19-CYBA RPS19 chr19 42373284 + CYBA chr16 88709928 - Exonic hg19 READ TCGA-AG-A00C 3 0 Out-of-frame Inter-chr q13.2 q24.2 43904 ChimerSeq STARFusion TCGA_RNA-Seq SH3GL1P1-OLFM4 SH3GL1P1 chr17 30368318 + OLFM4 chr13 53616108 + Exonic hg19 READ TCGA-AG-A00C 3 0 Out-of-frame Inter-chr q14.3 Tumor suppressor gene 43905 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31833130 - Exonic hg19 READ TCGA-AG-A00C 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 43906 ChimerSeq STARFusion TCGA_RNA-Seq ZNF44-SNHG8 ZNF44 chr19 12337183 - SNHG8 chr4 119200803 + Exonic hg19 READ TCGA-AG-A00C 3 0 Out-of-frame Inter-chr p13.2 Transcription factor q26 43907 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 READ TCGA-AG-A00C 3 0 Out-of-frame Inter-chr p13.13 q13.1 43908 ChimerSeq STARFusion TCGA_RNA-Seq NAPB-CST9L NAPB chr20 23375559 - CST9L chr20 23546724 - Exonic hg19 READ TCGA-DC-6157 3 16 In-Frame Intra-chr p11.21 p11.21 Seq+ 43909 ChimerSeq STARFusion TCGA_RNA-Seq HOOK3-HGSNAT HOOK3 chr8 42841938 + HGSNAT chr8 43024316 + Exonic hg19 READ TCGA-DC-6157 2 7 In-Frame Intra-chr p11.21 Oncogene p11.21 43910 ChimerSeq STARFusion TCGA_RNA-Seq GOLIM4-PRDX1 GOLIM4 chr3 167759180 - PRDX1 chr1 45977086 - Exonic hg19 READ TCGA-EI-6885 192 443 Out-of-frame Inter-chr q26.2 p34.1 Seq+ 43911 ChimerSeq STARFusion TCGA_RNA-Seq TNKS-MSRA TNKS chr8 9473187 + MSRA chr8 10065343 + Exonic hg19 READ TCGA-EI-6885 21 103 In-Frame Intra-chr p23.1 p23.1 Seq+ 43912 ChimerSeq STARFusion TCGA_RNA-Seq MGAT4A-FAM178B MGAT4A chr2 99342702 - FAM178B chr2 97568444 - Exonic hg19 READ TCGA-EI-6885 4 17 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 43913 ChimerSeq STARFusion TCGA_RNA-Seq RASSF3-TBK1 RASSF3 chr12 65004523 + TBK1 chr12 64889263 + Exonic hg19 READ TCGA-EF-5830 8 39 In-Frame Intra-chr q14.2 Tumor suppressor gene q14.2 Other:IKK Seq+ 43914 ChimerSeq STARFusion TCGA_RNA-Seq RASSF3-TBK1 RASSF3 chr12 65004523 + TBK1 chr12 64882267 + Exonic hg19 READ TCGA-EF-5830 5 39 Out-of-frame Intra-chr q14.2 Tumor suppressor gene q14.2 Other:IKK Seq+ 43915 ChimerSeq STARFusion TCGA_RNA-Seq ACACB-UNG ACACB chr12 109665294 + UNG chr12 109547634 + Exonic hg19 READ TCGA-EF-5830 6 17 3'UTR-CDS Intra-chr q24.11 q24.11 Seq+ 43916 ChimerSeq STARFusion TCGA_RNA-Seq MAL2-B2M MAL2 chr8 120220844 + B2M chr15 45007621 + Exonic hg19 READ TCGA-EF-5830 3 8 Out-of-frame Inter-chr q24.12 Oncogene Seq+ 43917 ChimerSeq STARFusion TCGA_RNA-Seq POLR1A-CTNNA2 POLR1A chr2 86265823 - CTNNA2 chr2 80831199 + Exonic hg19 READ TCGA-EF-5831 25 123 In-Frame Intra-chr p11.2 p12 Tumor suppressor gene Seq+ 43918 ChimerSeq STARFusion TCGA_RNA-Seq GNA13-SLC39A11 GNA13 chr17 63049620 - SLC39A11 chr17 71027853 - Exonic hg19 READ TCGA-EF-5831 2 17 In-Frame Intra-chr q24.1 q25.1 Seq+ 43919 ChimerSeq STARFusion TCGA_RNA-Seq DHX30-FBXW12 DHX30 chr3 47852201 + FBXW12 chr3 48419807 + Exonic hg19 READ TCGA-CL-4957 3 18 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 43920 ChimerSeq STARFusion TCGA_RNA-Seq LGALS4-DLGAP1 LGALS4 chr19 39297110 - DLGAP1 chr18 3499034 - Exonic hg19 READ TCGA-AG-3909 4 0 Out-of-frame Inter-chr p11.31 43921 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106111129 - Exonic hg19 READ TCGA-DY-A0XA 14 1 Out-of-frame Inter-chr q37.3 43922 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106136184 - Exonic hg19 READ TCGA-DY-A0XA 12 1 Out-of-frame Inter-chr q37.3 43923 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-TYRO3 IGKC chr2 89156966 - TYRO3 chr15 41854865 + Exonic hg19 READ TCGA-AG-3901 3 0 Out-of-frame Inter-chr p11.2 q15.1 TK:Axl 43924 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-ANP32B ZSWIM4 chr19 13942623 + ANP32B chr9 100777668 + Exonic hg19 READ TCGA-AG-3901 3 0 Out-of-frame Inter-chr p13.13 q22.33 43925 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1432-KANK1 KIAA1432 chr9 5629453 + KANK1 chr9 676890 + Exonic hg19 READ TCGA-AG-3902 2 7 CDS-5'UTR Intra-chr p24.3 Tumor suppressor gene Seq+ 43926 ChimerSeq STARFusion TCGA_RNA-Seq C2CD3-VPS37C C2CD3 chr11 73753099 - VPS37C chr11 60906307 - Exonic hg19 READ TCGA-DC-6158 4 21 CDS-5'UTR Intra-chr q13.4 q12.2 Seq+ 43927 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 READ TCGA-AF-3913 3 0 Out-of-frame Inter-chr p22.1 43928 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC10-RPL31P50 DNAJC10 chr2 183653145 + RPL31P50 chr12 31750085 - Exonic hg19 READ TCGA-AF-3913 3 0 Out-of-frame Inter-chr q32.1 p11.21 43929 ChimerSeq STARFusion TCGA_RNA-Seq EIF4A1P9-ZNF536 EIF4A1P9 chr17 2490998 - ZNF536 chr19 31039217 + Exonic hg19 READ TCGA-AF-3913 3 0 Out-of-frame Inter-chr p13.3 q12 Transcription factor 43930 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1107-PPDPF KIAA1107 chr1 92633439 + PPDPF chr20 62153106 + Exonic hg19 READ TCGA-AF-3913 3 0 Out-of-frame Inter-chr p22.1 q13.33 43931 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-NELFE ZBTB12 chr6 31868874 - NELFE chr6 31920084 - Exonic hg19 READ TCGA-AF-3913 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 43932 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-VARS ZBTB12 chr6 31868874 - VARS chr6 31760817 - Exonic hg19 READ TCGA-AF-3913 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 43933 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-EEF1A1 ZSWIM4 chr19 13942626 + EEF1A1 chr6 74229736 - Exonic hg19 READ TCGA-AF-3913 3 0 Out-of-frame Inter-chr p13.13 q13 Tumor suppressor gene 43934 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 READ TCGA-AF-3913 3 0 Out-of-frame Inter-chr p13.13 q13.1 43935 ChimerSeq STARFusion TCGA_RNA-Seq CCDC8-RPL31 CCDC8 chr19 46913667 - RPL31 chr2 101622507 + Exonic hg19 READ TCGA-AG-3599 4 0 Out-of-frame Inter-chr q13.32 q11.2 43936 ChimerSeq STARFusion TCGA_RNA-Seq EDF1-FAM159B EDF1 chr9 139757358 - FAM159B chr5 63986324 + Exonic hg19 READ TCGA-AG-3599 4 0 CDS-5'UTR Inter-chr q34.3 q12.3 43937 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 READ TCGA-AG-3599 4 0 Out-of-frame Inter-chr p13.13 q13.1 43938 ChimerSeq STARFusion TCGA_RNA-Seq LRCH1-SPG20 LRCH1 chr13 47127838 + SPG20 chr13 36878769 - Exonic hg19 READ TCGA-AG-3594 7 0 Out-of-frame Intra-chr q14.13 q13.3 Seq+ 43939 ChimerSeq STARFusion TCGA_RNA-Seq ADAM9-MROH5 ADAM9 chr8 38880844 + MROH5 chr8 142477648 - Exonic hg19 READ TCGA-AG-3594 3 0 Out-of-frame Intra-chr 43940 ChimerSeq STARFusion TCGA_RNA-Seq HCG4P3-ZNF536 HCG4P3 chr6 29974382 - ZNF536 chr19 31039209 + Exonic hg19 READ TCGA-AG-3594 3 0 Out-of-frame Inter-chr q12 Transcription factor 43941 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-IFT20 IGL@ chr22 23165773 + IFT20 chr17 26659406 - Exonic hg19 READ TCGA-AG-3594 3 0 Out-of-frame Inter-chr q11.22 q11.2 43942 ChimerSeq STARFusion TCGA_RNA-Seq S100A16-RPL14 S100A16 chr1 153579624 - RPL14 chr3 40503529 + Exonic hg19 READ TCGA-AG-3594 3 0 Out-of-frame Inter-chr q21.3 p22.1 43943 ChimerSeq STARFusion TCGA_RNA-Seq MEX3C-MRO MEX3C chr18 48722937 - MRO chr18 48346072 - Exonic hg19 READ TCGA-AG-3592 4 4 In-Frame Intra-chr q21.2 q21.2 43944 ChimerSeq STARFusion TCGA_RNA-Seq DHX35-FRG1 DHX35 chr20 37643577 + FRG1 chr4 190881903 + Exonic hg19 READ TCGA-AG-3593 7 0 Out-of-frame Inter-chr q11.23 43945 ChimerSeq STARFusion TCGA_RNA-Seq DUSP14-NTHL1 DUSP14 chr17 35850058 + NTHL1 chr16 2096368 - Exonic hg19 READ TCGA-AG-3593 5 0 Out-of-frame Inter-chr q12 p13.3 43946 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-SEPT9 IGL@ chr22 23055672 + SEPT9 chr17 75284064 + Exonic hg19 READ TCGA-AG-3593 3 0 Out-of-frame Inter-chr q11.22 43947 ChimerSeq STARFusion TCGA_RNA-Seq RSPO1-IGF2 RSPO1 chr1 38077353 - IGF2 chr11 2151403 - Exonic hg19 READ TCGA-AG-3593 3 0 Out-of-frame Inter-chr p34.3 p15.5 Oncogene 43948 ChimerSeq STARFusion TCGA_RNA-Seq PPP4R1L-EIF2S2 PPP4R1L chr20 56884282 - EIF2S2 chr20 32693351 - Exonic hg19 READ TCGA-DC-6156 4 2 3'UTR-CDS Intra-chr q13.32 q11.22 43949 ChimerSeq STARFusion TCGA_RNA-Seq GNAS-LRCH1 GNAS chr20 57480535 + LRCH1 chr13 47255876 + Exonic hg19 READ TCGA-DC-6156 2 6 Out-of-frame Inter-chr q13.32 Oncogene q14.13 Seq+ 43950 ChimerSeq STARFusion TCGA_RNA-Seq INTS9-CASC16 INTS9 chr8 28669844 - CASC16 chr16 52624979 - Exonic hg19 READ TCGA-AH-6644 3 33 Out-of-frame Inter-chr p21.1 q12.2 Seq+ 43951 ChimerSeq STARFusion TCGA_RNA-Seq LATS1-NUP43 LATS1 chr6 150038985 - NUP43 chr6 150052871 - Exonic hg19 READ TCGA-EI-6884 7 20 5'UTR-CDS Intra-chr q25.1 AGC:NDR Tumor suppressor gene q25.1 Seq+ 43952 ChimerSeq STARFusion TCGA_RNA-Seq CCAR2-PDLIM2 CCAR2 chr8 22465578 + PDLIM2 chr8 22442334 + Exonic hg19 READ TCGA-EI-6884 3 11 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.3 Seq+ 43953 ChimerSeq STARFusion TCGA_RNA-Seq SEPT2-ZNF285 SEPT2 chr2 242263656 + ZNF285 chr19 44901421 - Exonic hg19 READ TCGA-EI-6884 2 15 CDS-5'UTR Inter-chr q37.3 q13.31 Transcription factor 43954 ChimerSeq STARFusion TCGA_RNA-Seq SEPT2-ZNF285 SEPT2 chr2 242265528 + ZNF285 chr19 44901421 - Exonic hg19 READ TCGA-EI-6884 2 9 CDS-5'UTR Inter-chr q37.3 q13.31 Transcription factor 43955 ChimerSeq STARFusion TCGA_RNA-Seq SEPT2-ZNF285 SEPT2 chr2 242255397 + ZNF285 chr19 44901421 - Exonic hg19 READ TCGA-EI-6884 2 9 5'UTR-5'UTR Inter-chr q37.3 q13.31 Transcription factor 43956 ChimerSeq STARFusion TCGA_RNA-Seq RIPK1-SERPINB9 RIPK1 chr6 3064293 + SERPINB9 chr6 2900855 - Exonic hg19 READ TCGA-EI-6883 5 2 5'UTR-5'UTR Intra-chr p25.2 TKL:RIPK p25.2 43957 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128841404 - RSPO3 chr6 127469793 + Exonic hg19 READ TCGA-AF-6136 10 68 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 43958 ChimerSeq STARFusion TCGA_RNA-Seq GMDS-TMTC2 GMDS chr6 2245555 - TMTC2 chr12 83324210 + Exonic hg19 READ TCGA-BM-6198 8 20 Out-of-frame Inter-chr p25.3 q21.31 Seq+ 43959 ChimerSeq STARFusion TCGA_RNA-Seq NAIP-IFI27 NAIP chr5 70281590 - IFI27 chr14 94582131 + Exonic hg19 READ TCGA-AG-3878 5 0 Out-of-frame Inter-chr q13.2 q32.12 43960 ChimerSeq STARFusion TCGA_RNA-Seq RNA5SP92-EEF1A1 RNA5SP92 chr2 33558018 + EEF1A1 chr6 74229184 - Exonic hg19 READ TCGA-AG-3878 4 0 Out-of-frame Inter-chr p22.3 q13 Tumor suppressor gene 43961 ChimerSeq STARFusion TCGA_RNA-Seq RPS9-EEF1D RPS9 chr19 54711350 + EEF1D chr8 144679593 - Exonic hg19 READ TCGA-AG-3878 4 0 Out-of-frame Inter-chr 43962 ChimerSeq STARFusion TCGA_RNA-Seq RPL13A-CERS5 RPL13A chr19 49993177 + CERS5 chr12 50561198 - Exonic hg19 READ TCGA-AG-3894 3 0 Out-of-frame Inter-chr q13.33 q13.12 43963 ChimerSeq STARFusion TCGA_RNA-Seq MED13L-COX6A1 MED13L chr12 116675273 - COX6A1 chr12 120876182 + Exonic hg19 READ TCGA-AF-4110 5 23 In-Frame Intra-chr q24.21 q24.31 Seq+ 43964 ChimerSeq STARFusion TCGA_RNA-Seq GNB2L1-IGKC GNB2L1 chr5 180669026 - IGKC chr2 89160770 - Exonic hg19 READ TCGA-AF-4110 7 1 Out-of-frame Inter-chr Tumor suppressor gene p11.2 43965 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-SORCS1 MYH9 chr22 36701079 - SORCS1 chr10 108489872 - Exonic hg19 READ TCGA-EI-7004 6 16 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene q25.1 Seq+ 43966 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 READ TCGA-AG-3581 5 0 Out-of-frame Inter-chr q13.33 p21.1 43967 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V0A1-RARA ATP6V0A1 chr17 40642655 + RARA chr17 38487109 + Exonic hg19 READ TCGA-AG-3581 3 0 CDS-5'UTR Intra-chr q21.2 q21.2 Oncogene Transcription factor Seq+ 43968 ChimerSeq STARFusion TCGA_RNA-Seq RPL37AP1-ETV5 RPL37AP1 chr20 43095441 - ETV5 chr3 185826703 - Exonic hg19 READ TCGA-AG-3581 3 0 Out-of-frame Inter-chr q13.12 q27.2 Oncogene Transcription factor 43969 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-PLXNB2 IGH@ chr14 106725208 - PLXNB2 chr22 50721189 - Exonic hg19 READ TCGA-AG-3583 4 0 Out-of-frame Inter-chr 32.33 q13.33 43970 ChimerSeq STARFusion TCGA_RNA-Seq FTL-ZNF536 FTL chr19 49469662 + ZNF536 chr19 31039216 + Exonic hg19 READ TCGA-AG-3582 6 0 Out-of-frame Intra-chr q13.33 q12 Transcription factor 43971 ChimerSeq STARFusion TCGA_RNA-Seq DST-FUT5 DST chr6 56707853 - FUT5 chr19 5897008 - Exonic hg19 READ TCGA-AG-3582 5 0 Out-of-frame Inter-chr p12.1 Oncogene p13.3 43972 ChimerSeq STARFusion TCGA_RNA-Seq DST-NDUFA11 DST chr6 56707853 - NDUFA11 chr19 5897008 - Exonic hg19 READ TCGA-AG-3582 5 0 5'UTR-CDS Inter-chr p12.1 Oncogene p13.3 43973 ChimerSeq STARFusion TCGA_RNA-Seq BCAS4-ZNF536 BCAS4 chr20 49457219 + ZNF536 chr19 31039216 + Exonic hg19 READ TCGA-AG-3582 3 0 Out-of-frame Inter-chr q13.13 q12 Transcription factor 43974 ChimerSeq STARFusion TCGA_RNA-Seq RPS3-ZNF536 RPS3 chr11 75115227 + ZNF536 chr19 31039220 + Exonic hg19 READ TCGA-AG-3582 3 0 Out-of-frame Inter-chr q13.4 q12 Transcription factor 43975 ChimerSeq STARFusion TCGA_RNA-Seq AFTPH-ELF1 AFTPH chr2 64796813 + ELF1 chr13 41556418 - Exonic hg19 READ TCGA-G5-6235 2 6 CDS-5'UTR Inter-chr p14 q14.11 Transcription factor Seq+ 43976 ChimerSeq STARFusion TCGA_RNA-Seq GLYR1-ROGDI GLYR1 chr16 4855252 - ROGDI chr16 4852351 - Exonic hg19 READ TCGA-AG-3584 4 0 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 43977 ChimerSeq STARFusion TCGA_RNA-Seq RPL14-E2F4 RPL14 chr3 40503522 + E2F4 chr16 67229814 + Exonic hg19 READ TCGA-AG-3584 3 0 Out-of-frame Inter-chr p22.1 q22.1 Transcription factor 43978 ChimerSeq STARFusion TCGA_RNA-Seq NFS1-TGIF2 NFS1 chr20 34268659 - TGIF2 chr20 35219313 + Exonic hg19 READ TCGA-AG-3587 5 0 Out-of-frame Intra-chr q11.22 q11.23 Transcription factor 43979 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-PLEKHH3 IGH@ chr14 106478118 - PLEKHH3 chr17 40828007 - Exonic hg19 READ TCGA-AG-3586 3 0 Out-of-frame Inter-chr 32.33 q21.2 43980 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-PIP5K1P1 KCTD20 chr6 36457999 + PIP5K1P1 chr6 7987766 + Exonic hg19 READ TCGA-AH-6903 14 0 Out-of-frame Intra-chr p21.31 p24.3 43981 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SCMH1 IGH@ chr14 106877614 - SCMH1 chr1 41579058 - Exonic hg19 READ TCGA-AG-A01Y 4 0 Out-of-frame Inter-chr 32.33 p34.2 Transcription factor 43982 ChimerSeq STARFusion TCGA_RNA-Seq VKORC1L1-ACHE VKORC1L1 chr7 65338552 + ACHE chr7 100488959 - Exonic hg19 READ TCGA-CI-6621 33 67 In-Frame Intra-chr q11.21 q22.1 Tumor suppressor gene Seq+ 43983 ChimerSeq STARFusion TCGA_RNA-Seq DTX2P1-SRRT DTX2P1 chr7 76608193 + SRRT chr7 100483868 + Exonic hg19 READ TCGA-CI-6621 20 90 Out-of-frame Intra-chr q11.23 q22.1 Seq+ 43984 ChimerSeq STARFusion TCGA_RNA-Seq SPRED1-AP3B2 SPRED1 chr15 38591748 + AP3B2 chr15 83358205 - Exonic hg19 READ TCGA-CI-6621 2 5 Out-of-frame Intra-chr q14 q25.2 Seq+ 43985 ChimerSeq STARFusion TCGA_RNA-Seq OBFC1-TM9SF3 OBFC1 chr10 105677220 - TM9SF3 chr10 98336586 - Exonic hg19 READ TCGA-CI-6624 2 5 Out-of-frame Intra-chr q24.1 Seq+ 43986 ChimerSeq STARFusion TCGA_RNA-Seq INADL-MAP2K5 INADL chr1 62274202 + MAP2K5 chr15 68040569 + Exonic hg19 READ TCGA-DC-6683 11 41 In-Frame Inter-chr q23 STE:STE7 Seq+ 43987 ChimerSeq STARFusion TCGA_RNA-Seq PRICKLE4-GCLC PRICKLE4 chr6 41757074 + GCLC chr6 53429687 - Exonic hg19 READ TCGA-AG-4021 6 48 Out-of-frame Intra-chr p21.1 p12.1 43988 ChimerSeq STARFusion TCGA_RNA-Seq TOMM6-GCLC TOMM6 chr6 41757074 + GCLC chr6 53429687 - Exonic hg19 READ TCGA-AG-4021 6 48 3'UTR-5'UTR Intra-chr p21.1 p12.1 Seq+ 43989 ChimerSeq STARFusion TCGA_RNA-Seq TRIM33-BCAR3 TRIM33 chr1 115053172 - BCAR3 chr1 94171698 - Exonic hg19 READ TCGA-AG-4021 7 15 CDS-5'UTR Intra-chr p13.2 Oncogene p22.1 Seq+ 43990 ChimerSeq STARFusion TCGA_RNA-Seq GIGYF2-C6orf52 GIGYF2 chr2 233660931 + C6orf52 chr6 10672869 - Exonic hg19 READ TCGA-AH-6544 10 130 CDS-3'UTR Inter-chr q37.1 p24.2 Seq+ 43991 ChimerSeq STARFusion TCGA_RNA-Seq GIGYF2-C6orf52 GIGYF2 chr2 233660929 + C6orf52 chr6 10672871 - Exonic hg19 READ TCGA-AH-6544 8 129 Out-of-frame Inter-chr q37.1 p24.2 Seq+ 43992 ChimerSeq STARFusion TCGA_RNA-Seq GIGYF2-C6orf52 GIGYF2 chr2 233660929 + C6orf52 chr6 10671833 - Exonic hg19 READ TCGA-AH-6544 7 129 Out-of-frame Inter-chr q37.1 p24.2 Seq+ 43993 ChimerSeq STARFusion TCGA_RNA-Seq GIGYF2-C6orf52 GIGYF2 chr2 233660931 + C6orf52 chr6 10671831 - Exonic hg19 READ TCGA-AH-6544 4 129 In-Frame Inter-chr q37.1 p24.2 Seq+ 43994 ChimerSeq STARFusion TCGA_RNA-Seq CAPZB-UBR4 CAPZB chr1 19811930 - UBR4 chr1 19415471 - Exonic hg19 READ TCGA-AH-6549 24 62 In-Frame Intra-chr p36.13 p36.13 43995 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-CRYM NFAT5 chr16 69600277 + CRYM chr16 21281212 - Exonic hg19 READ TCGA-AH-6549 8 43 Out-of-frame Intra-chr q22.1 Transcription factor Seq+ 43996 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-CRYM NFAT5 chr16 69602451 + CRYM chr16 21281212 - Exonic hg19 READ TCGA-AH-6549 6 41 Out-of-frame Intra-chr q22.1 Transcription factor Seq+ 43997 ChimerSeq STARFusion TCGA_RNA-Seq KPNA6-RAB11FIP4 KPNA6 chr1 32573735 + RAB11FIP4 chr17 29844669 + Exonic hg19 READ TCGA-AH-6549 4 15 Out-of-frame Inter-chr p35.2 q11.2 Seq+ 43998 ChimerSeq STARFusion TCGA_RNA-Seq CHMP4B-FER1L4 CHMP4B chr20 32399464 + FER1L4 chr20 34167378 - Exonic hg19 READ TCGA-F5-6864 14 52 CDS-3'UTR Intra-chr q11.22 q11.22 Tumor suppressor gene Seq+ 43999 ChimerSeq STARFusion TCGA_RNA-Seq CHMP4B-FER1L4 CHMP4B chr20 32399464 + FER1L4 chr20 34167036 - Exonic hg19 READ TCGA-F5-6864 13 52 CDS-3'UTR Intra-chr q11.22 q11.22 Tumor suppressor gene Seq+ 44000 ChimerSeq STARFusion TCGA_RNA-Seq CHMP4B-FER1L4 CHMP4B chr20 32399464 + FER1L4 chr20 34164750 - Exonic hg19 READ TCGA-F5-6864 2 52 CDS-3'UTR Intra-chr q11.22 q11.22 Tumor suppressor gene Seq+ 44001 ChimerSeq STARFusion TCGA_RNA-Seq CAMK2D-TLL2 CAMK2D chr4 114421619 - TLL2 chr10 98192719 - Exonic hg19 READ TCGA-F5-6864 3 22 In-Frame Inter-chr q26 q24.1 Seq+ 44002 ChimerSeq STARFusion TCGA_RNA-Seq CAMK2D-TLL2 CAMK2D chr4 114421619 - TLL2 chr10 98188505 - Exonic hg19 READ TCGA-F5-6864 3 22 In-Frame Inter-chr q26 q24.1 Seq+ 44003 ChimerSeq STARFusion TCGA_RNA-Seq SMEK2-ALK SMEK2 chr2 55804451 - ALK chr2 29940563 - Exonic hg19 READ TCGA-F5-6864 4 6 In-Frame Intra-chr p23.1 TK:ALK Oncogene Seq+ 44004 ChimerSeq STARFusion TCGA_RNA-Seq MTATP8P1-SERPINA1 MTATP8P1 chr1 568990 + SERPINA1 chr14 94849437 - Exonic hg19 READ TCGA-G5-6572 3 5 Out-of-frame Inter-chr p36.33 q32.13 44005 ChimerSeq STARFusion TCGA_RNA-Seq SPATA33-IGKC SPATA33 chr16 89726876 + IGKC chr2 89157197 - Exonic hg19 READ TCGA-AH-6547 7 0 Out-of-frame Inter-chr q24.3 p11.2 44006 ChimerSeq STARFusion TCGA_RNA-Seq GRIN2B-MANSC1 GRIN2B chr12 13906251 - MANSC1 chr12 12496348 - Exonic hg19 READ TCGA-AG-3574 5 0 CDS-5'UTR Intra-chr p13.1 44007 ChimerSeq STARFusion TCGA_RNA-Seq GRIN2B-LOH12CR2 GRIN2B chr12 13906251 - LOH12CR2 chr12 12509739 - Exonic hg19 READ TCGA-AG-3574 4 0 CDS-3'UTR Intra-chr p13.1 44008 ChimerSeq STARFusion TCGA_RNA-Seq MTATP8P1-MTND2P28 MTATP8P1 chr1 568978 + MTND2P28 chr1 565870 + Exonic hg19 READ TCGA-F5-6812 5 52 Out-of-frame Intra-chr p36.33 p36.33 44009 ChimerSeq STARFusion TCGA_RNA-Seq MTATP8P1-MTND2P28 MTATP8P1 chr1 568987 + MTND2P28 chr1 565879 + Exonic hg19 READ TCGA-F5-6812 3 49 Out-of-frame Intra-chr p36.33 p36.33 44010 ChimerSeq STARFusion TCGA_RNA-Seq CLTA-PKP3 CLTA chr9 36191216 + PKP3 chr11 397065 + Exonic hg19 READ TCGA-AG-3885 3 0 Out-of-frame Inter-chr p13.3 p15.5 44011 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-TYRO3 IGKC chr2 89156966 - TYRO3 chr15 41854865 + Exonic hg19 READ TCGA-AG-3885 3 0 Out-of-frame Inter-chr p11.2 q15.1 TK:Axl 44012 ChimerSeq STARFusion TCGA_RNA-Seq GAPDH-FAM159B GAPDH chr12 6645955 + FAM159B chr5 63986326 + Exonic hg19 READ TCGA-AG-3887 3 0 Out-of-frame Inter-chr p13.31 q12.3 44013 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF3-PI4KA ZNRF3 chr22 29383189 + PI4KA chr22 21193019 - Exonic hg19 READ TCGA-AG-3578 16 0 In-Frame Intra-chr q12.1 q11.21 Seq+ 44014 ChimerSeq STARFusion TCGA_RNA-Seq KLHL29-IGKJ4 KLHL29 chr2 23919295 + IGKJ4 chr2 89160435 - Exonic hg19 READ TCGA-AG-3578 6 0 Out-of-frame Intra-chr p24.1 p11.2 44015 ChimerSeq STARFusion TCGA_RNA-Seq EMX1-ANKRD30BL EMX1 chr2 73144981 + ANKRD30BL chr2 133015536 - Exonic hg19 READ TCGA-AG-3881 4 0 Out-of-frame Intra-chr p13.2 Transcription factor q21.2 44016 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL671P-HCG4P7 RN7SL671P chr4 1870886 - HCG4P7 chr6 29855588 - Exonic hg19 READ TCGA-AG-3881 3 0 Out-of-frame Inter-chr 44017 ChimerSeq STARFusion TCGA_RNA-Seq RPL27-CCDC57 RPL27 chr17 41154760 + CCDC57 chr17 80086381 - Exonic hg19 READ TCGA-AG-3881 3 0 Out-of-frame Intra-chr q21.31 q25.3 44018 ChimerSeq STARFusion TCGA_RNA-Seq KLF3-ABLIM2 KLF3 chr4 38666082 + ABLIM2 chr4 8108364 - Exonic hg19 READ TCGA-AG-3882 7 0 5'UTR-CDS Intra-chr p14 Transcription factor p16.1 44019 ChimerSeq STARFusion TCGA_RNA-Seq NAIP-RPL11 NAIP chr5 70281590 - RPL11 chr1 24019101 + Exonic hg19 READ TCGA-AG-3882 5 0 Out-of-frame Inter-chr q13.2 p36.11 Tumor suppressor gene 44020 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL671P-HCG4P7 RN7SL671P chr4 1870886 - HCG4P7 chr6 29855588 - Exonic hg19 READ TCGA-AG-3882 3 0 Out-of-frame Inter-chr 44021 ChimerSeq STARFusion TCGA_RNA-Seq TCF25-PABPC1 TCF25 chr16 89958664 + PABPC1 chr8 101717900 - Exonic hg19 READ TCGA-AG-3882 3 0 Out-of-frame Inter-chr q24.3 q22.3 44022 ChimerSeq STARFusion TCGA_RNA-Seq PTMA-PCYOX1 PTMA chr2 232573457 + PCYOX1 chr2 70505348 + Exonic hg19 READ TCGA-AG-3883 3 0 Out-of-frame Intra-chr q37.1 p13.3 44023 ChimerSeq STARFusion TCGA_RNA-Seq RPS3P6-ETV5 RPS3P6 chr12 62415880 - ETV5 chr3 185826704 - Exonic hg19 READ TCGA-AG-3883 3 0 Out-of-frame Inter-chr q14.1 q27.2 Oncogene Transcription factor 44024 ChimerSeq STARFusion TCGA_RNA-Seq CDX2-PDCD6 CDX2 chr13 28541394 - PDCD6 chr5 311408 + Exonic hg19 READ TCGA-AG-3883 2 0 Out-of-frame Inter-chr q12.2 Tumor suppressor gene Transcription factor p15.33 44025 ChimerSeq STARFusion TCGA_RNA-Seq PRDM11-FOLH1 PRDM11 chr11 45204674 + FOLH1 chr11 49168497 - Exonic hg19 READ TCGA-AG-3883 2 0 Out-of-frame Intra-chr p11.2 Tumor suppressor gene p11.12 44026 ChimerSeq STARFusion TCGA_RNA-Seq PRPS1-MCF2 PRPS1 chrX 106871980 + MCF2 chrX 138733947 - Exonic hg19 READ TCGA-AG-3883 2 0 5'UTR-5'UTR Intra-chr q22.3 q27.1 44027 ChimerSeq STARFusion TCGA_RNA-Seq ZMYM2-PSPC1 ZMYM2 chr13 20534166 + PSPC1 chr13 20279971 - Exonic hg19 READ TCGA-AG-3883 2 0 5'UTR-CDS Intra-chr q12.11 q12.11 44028 ChimerSeq STARFusion TCGA_RNA-Seq PLCB4-RASA3 PLCB4 chr20 9424890 + RASA3 chr13 114762215 - Exonic hg19 READ TCGA-G5-6641 3 6 In-Frame Inter-chr p12.3 Seq+ 44029 ChimerSeq STARFusion TCGA_RNA-Seq UNKL-STX1B UNKL chr16 1440633 - STX1B chr16 31012924 - Exonic hg19 READ TCGA-F5-6811 2 7 In-Frame Intra-chr p13.3 p11.2 Seq+ 44030 ChimerSeq STARFusion TCGA_RNA-Seq ARID2-SCAF11 ARID2 chr12 46125097 + SCAF11 chr12 46357971 - Exonic hg19 READ TCGA-F5-6464 5 5 CDS-5'UTR Intra-chr q12 Oncogene Tumor suppressor gene Transcription factor q12 Seq+ 44031 ChimerSeq STARFusion TCGA_RNA-Seq TRIM24-BRAF TRIM24 chr7 138255748 + BRAF chr7 140550012 - Exonic hg19 READ TCGA-F5-6464 2 8 In-Frame Intra-chr q33 Oncogene Tumor suppressor gene q34 TKL:RAF Oncogene Pub Seq+ 44032 ChimerSeq STARFusion TCGA_RNA-Seq ATXN1-DTNBP1 ATXN1 chr6 16486203 - DTNBP1 chr6 15533626 - Exonic hg19 READ TCGA-F5-6465 27 67 5'UTR-CDS Intra-chr p22.3 p22.3 Seq+ 44033 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGH@ INTS1 chr7 1511981 - IGH@ chr14 106136184 - Exonic hg19 READ TCGA-F5-6465 8 1 Out-of-frame Inter-chr p22.3 32.33 44034 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGHG2 INTS1 chr7 1511981 - IGHG2 chr14 106136184 - Exonic hg19 READ TCGA-F5-6465 8 1 Out-of-frame Inter-chr p22.3 44035 ChimerSeq STARFusion TCGA_RNA-Seq CUL4A-TFDP1 CUL4A chr13 113864402 + TFDP1 chr13 114265311 + Exonic hg19 READ TCGA-CI-6619 2 9 In-Frame Intra-chr q34 q34 Transcription factor Seq+ 44036 ChimerSeq STARFusion TCGA_RNA-Seq IGF2BP1-BAIAP2 IGF2BP1 chr17 47109335 + BAIAP2 chr17 79073728 + Exonic hg19 READ TCGA-CI-6619 3 4 Out-of-frame Intra-chr q21.32 q25.3 Seq+ 44037 ChimerSeq STARFusion TCGA_RNA-Seq CCAT1-CASC8 CCAT1 chr8 128231055 - CASC8 chr8 128433208 - Exonic hg19 READ TCGA-AF-5654 8 11 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 44038 ChimerSeq STARFusion TCGA_RNA-Seq GTF2F2-COG3 GTF2F2 chr13 45827105 + COG3 chr13 46050336 + Exonic hg19 READ TCGA-AF-5654 3 12 In-Frame Intra-chr q14.12 q14.13 44039 ChimerSeq STARFusion TCGA_RNA-Seq STK24-SLC15A1 STK24 chr13 99228999 - SLC15A1 chr13 99379113 - Exonic hg19 READ TCGA-AF-5654 3 5 Out-of-frame Intra-chr q32.2 q32.3 Seq+ 44040 ChimerSeq STARFusion TCGA_RNA-Seq RPUSD2-ZFYVE19 RPUSD2 chr15 40862142 + ZFYVE19 chr15 41104897 + Exonic hg19 READ TCGA-AF-5654 2 5 Out-of-frame Intra-chr q15.1 q15.1 Seq+ 44041 ChimerSeq STARFusion TCGA_RNA-Seq BRI3BP-MARS BRI3BP chr12 125478549 + MARS chr12 57905481 + Exonic hg19 READ TCGA-AG-4015 22 0 In-Frame Intra-chr q24.31 q13.3 Seq+ 44042 ChimerSeq STARFusion TCGA_RNA-Seq HECTD4-PKP2 HECTD4 chr12 112819756 - PKP2 chr12 33003907 - Exonic hg19 READ TCGA-AG-4015 6 0 Out-of-frame Intra-chr q24.13 p11.21 44043 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 READ TCGA-AG-4015 3 0 Out-of-frame Inter-chr q13.33 p21.1 44044 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK5-SMARCD1 MAPKAPK5 chr12 112308984 + SMARCD1 chr12 50490633 + Exonic hg19 READ TCGA-AG-4015 3 0 In-Frame Intra-chr q24.12 CAMK:MAPKAPK q13.12 44045 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ITFG3 IGH@ chr14 106610470 - ITFG3 chr16 319849 + Exonic hg19 READ TCGA-EI-6511 33 1 Out-of-frame Inter-chr 32.33 44046 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ITFG3 IGH@ chr14 106518551 - ITFG3 chr16 319849 + Exonic hg19 READ TCGA-EI-6511 15 1 Out-of-frame Inter-chr 32.33 44047 ChimerSeq STARFusion TCGA_RNA-Seq MAP7D2-SH3KBP1 MAP7D2 chrX 20134868 - SH3KBP1 chrX 19725102 - Exonic hg19 READ TCGA-EI-6511 3 17 In-Frame Intra-chr p22.12 p22.12 Seq+ 44048 ChimerSeq STARFusion TCGA_RNA-Seq IFNGR2-SPATA20P1 IFNGR2 chr21 34799336 + SPATA20P1 chr21 39610665 - Exonic hg19 READ TCGA-F5-6810 6 97 Out-of-frame Intra-chr q22.13 44049 ChimerSeq STARFusion TCGA_RNA-Seq C21orf58-IFNGR2 C21orf58 chr21 47731370 - IFNGR2 chr21 34804484 + Exonic hg19 READ TCGA-F5-6810 6 25 Out-of-frame Intra-chr q22.3 Seq+ 44050 ChimerSeq STARFusion TCGA_RNA-Seq TCEANC2-MICU1 TCEANC2 chr1 54534570 + MICU1 chr10 74237014 - Exonic hg19 READ TCGA-F5-6810 2 27 In-Frame Inter-chr p32.3 q22.1 Seq+ 44051 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH3-SPECC1 NOTCH3 chr19 15297689 - SPECC1 chr17 20107646 + Exonic hg19 READ TCGA-F5-6810 4 13 In-Frame Inter-chr p13.12 Oncogene Tumor suppressor gene p11.2 Seq+ 44052 ChimerSeq STARFusion TCGA_RNA-Seq XIAP-SH2D1A XIAP chrX 123022568 + SH2D1A chrX 123499611 + Exonic hg19 READ TCGA-F5-6810 2 13 In-Frame Intra-chr q25 q25 Oncogene 44053 ChimerSeq STARFusion TCGA_RNA-Seq KCNQ1-MMP26 KCNQ1 chr11 2610084 + MMP26 chr11 4788500 + Exonic hg19 READ TCGA-DC-6160 4 9 5'UTR-5'UTR Intra-chr p15.5 p15.4 Seq+ 44054 ChimerSeq STARFusion TCGA_RNA-Seq PACS1-IGH@ PACS1 chr11 65837929 + IGH@ chr14 106136182 - Exonic hg19 READ TCGA-DC-6160 5 1 Out-of-frame Inter-chr q13.1 32.33 44055 ChimerSeq STARFusion TCGA_RNA-Seq PACS1-IGH@ PACS1 chr11 65837935 + IGH@ chr14 106111121 - Exonic hg19 READ TCGA-DC-6160 4 1 Out-of-frame Inter-chr q13.1 32.33 44056 ChimerSeq STARFusion TCGA_RNA-Seq PAN3-LINC01076 PAN3 chr13 28752072 + LINC01076 chr13 25767351 - Exonic hg19 READ TCGA-F5-6571 25 64 Out-of-frame Intra-chr q12.2 q12.13 44057 ChimerSeq STARFusion TCGA_RNA-Seq SPATA13-TPTE2P1 SPATA13 chr13 24826000 + TPTE2P1 chr13 25525626 - Exonic hg19 READ TCGA-F5-6571 8 14 CDS-3'UTR Intra-chr q12.12 q12.13 Seq+ 44058 ChimerSeq STARFusion TCGA_RNA-Seq MED1-SRCIN1 MED1 chr17 37595418 - SRCIN1 chr17 36720549 - Exonic hg19 READ TCGA-AG-3898 15 0 Out-of-frame Intra-chr q12 Tumor suppressor gene q12 Seq+ 44059 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-SRCIN1 FBXL20 chr17 37417705 - SRCIN1 chr17 36709091 - Exonic hg19 READ TCGA-AG-3898 11 0 3'UTR-CDS Intra-chr q12 q12 44060 ChimerSeq STARFusion TCGA_RNA-Seq MYBL2-CNBD2 MYBL2 chr20 42328684 + CNBD2 chr20 34582960 + Exonic hg19 READ TCGA-AG-3898 5 0 Out-of-frame Intra-chr q13.12 Transcription factor q11.23 44061 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD6-HSPD1P10 ANKRD6 chr6 90272273 + HSPD1P10 chr6 88009184 + Exonic hg19 READ TCGA-AG-3898 3 0 Out-of-frame Intra-chr q15 q14.3 44062 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-ANP32B ZSWIM4 chr19 13942623 + ANP32B chr9 100777668 + Exonic hg19 READ TCGA-AG-3898 3 0 Out-of-frame Inter-chr p13.13 q22.33 44063 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 READ TCGA-AG-3898 3 0 Out-of-frame Inter-chr p13.13 q13.1 44064 ChimerSeq STARFusion TCGA_RNA-Seq EDF1-FAM159B EDF1 chr9 139757358 - FAM159B chr5 63986324 + Exonic hg19 READ TCGA-AG-3896 3 0 CDS-5'UTR Inter-chr q34.3 q12.3 44065 ChimerSeq STARFusion TCGA_RNA-Seq MYEOV-IGHA2 MYEOV chr11 69064658 + IGHA2 chr14 106054734 - Exonic hg19 READ TCGA-AG-3896 3 0 Out-of-frame Inter-chr q13.3 44066 ChimerSeq STARFusion TCGA_RNA-Seq RNA5SP92-EEF1A1 RNA5SP92 chr2 33558018 + EEF1A1 chr6 74229184 - Exonic hg19 READ TCGA-AG-3896 3 0 Out-of-frame Inter-chr p22.3 q13 Tumor suppressor gene 44067 ChimerSeq STARFusion TCGA_RNA-Seq ENTPD6-C20orf26 ENTPD6 chr20 25205953 + C20orf26 chr20 20269253 + Exonic hg19 READ TCGA-AG-3605 16 0 In-Frame Intra-chr p11.21 Seq+ 44068 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 READ TCGA-AG-3605 6 0 Out-of-frame Inter-chr p13.13 q13.1 44069 ChimerSeq STARFusion TCGA_RNA-Seq ABHD11-RPL35 ABHD11 chr7 73152823 - RPL35 chr9 127620282 - Exonic hg19 READ TCGA-AG-3605 5 0 Out-of-frame Inter-chr q11.23 q33.3 44070 ChimerSeq STARFusion TCGA_RNA-Seq RPL8-ETV5 RPL8 chr8 146015757 - ETV5 chr3 185826703 - Exonic hg19 READ TCGA-AG-3605 4 0 Out-of-frame Inter-chr q24.3 q27.2 Oncogene Transcription factor 44071 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 READ TCGA-AG-3605 3 0 Out-of-frame Inter-chr p22.1 44072 ChimerSeq STARFusion TCGA_RNA-Seq RNA5SP92-EEF1A1 RNA5SP92 chr2 33558018 + EEF1A1 chr6 74229184 - Exonic hg19 READ TCGA-AG-3605 3 0 Out-of-frame Inter-chr p22.3 q13 Tumor suppressor gene 44073 ChimerSeq STARFusion TCGA_RNA-Seq RPS19BP1-KCNQ4 RPS19BP1 chr22 39928700 - KCNQ4 chr1 41249768 + Exonic hg19 READ TCGA-AG-3605 3 0 Out-of-frame Inter-chr q13.1 p34.2 44074 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CSF3R IGH@ chr14 106877621 - CSF3R chr1 36932502 - Exonic hg19 READ TCGA-AG-3890 3 0 Out-of-frame Inter-chr 32.33 p34.3 44075 ChimerSeq STARFusion TCGA_RNA-Seq GMEB2-RALY GMEB2 chr20 62234318 - RALY chr20 32659872 + Exonic hg19 READ TCGA-DY-A1DD 9 77 CDS-5'UTR Intra-chr q13.33 Transcription factor q11.22 Seq+ 44076 ChimerSeq STARFusion TCGA_RNA-Seq GMEB2-RALY GMEB2 chr20 62234318 - RALY chr20 32652850 + Exonic hg19 READ TCGA-DY-A1DD 2 74 CDS-5'UTR Intra-chr q13.33 Transcription factor q11.22 Seq+ 44077 ChimerSeq STARFusion TCGA_RNA-Seq RAD52-KDM5A RAD52 chr12 1058768 - KDM5A chr12 465703 - Exonic hg19 READ TCGA-DY-A1DD 4 9 5'UTR-CDS Intra-chr p13.33 p13.33 Tumor suppressor gene Seq+ 44078 ChimerSeq STARFusion TCGA_RNA-Seq STAU2-PLEKHF2 STAU2 chr8 74585342 - PLEKHF2 chr8 96166259 + Exonic hg19 READ TCGA-F5-6813 5 11 CDS-5'UTR Intra-chr q21.11 q22.1 Seq+ 44079 ChimerSeq STARFusion TCGA_RNA-Seq RAD21-EIF3H RAD21 chr8 117886850 - EIF3H chr8 117671219 - Exonic hg19 READ TCGA-DY-A1DE 54 87 5'UTR-CDS Intra-chr q24.11 q24.11 Seq+ 44080 ChimerSeq STARFusion TCGA_RNA-Seq RAD21-EIF3H RAD21 chr8 117886602 - EIF3H chr8 117671219 - Exonic hg19 READ TCGA-DY-A1DE 7 86 5'UTR-CDS Intra-chr q24.11 q24.11 Seq+ 44081 ChimerSeq STARFusion TCGA_RNA-Seq RABGAP1L-CACYBP RABGAP1L chr1 174846743 + CACYBP chr1 174973750 + Exonic hg19 READ TCGA-DY-A1DE 15 38 In-Frame Intra-chr q25.1 q25.1 Seq+ 44082 ChimerSeq STARFusion TCGA_RNA-Seq RABGAP1L-CACYBP RABGAP1L chr1 174843644 + CACYBP chr1 174973750 + Exonic hg19 READ TCGA-DY-A1DE 2 38 5'UTR-5'UTR Intra-chr q25.1 q25.1 Seq+ 44083 ChimerSeq STARFusion TCGA_RNA-Seq RABGAP1L-CACYBP RABGAP1L chr1 174844851 + CACYBP chr1 174973750 + Exonic hg19 READ TCGA-DY-A1DE 2 32 5'UTR-5'UTR Intra-chr q25.1 q25.1 Seq+ 44084 ChimerSeq STARFusion TCGA_RNA-Seq BTBD2-RALY BTBD2 chr19 2013546 - RALY chr20 32659872 + Exonic hg19 READ TCGA-DY-A1DE 2 13 CDS-5'UTR Inter-chr p13.3 q11.22 Seq+ 44085 ChimerSeq STARFusion TCGA_RNA-Seq RHOG-NUP98 RHOG chr11 3862124 - NUP98 chr11 3720578 - Exonic hg19 READ TCGA-AG-A026 5 0 5'UTR-CDS Intra-chr p15.4 p15.4 Oncogene Tumor suppressor gene Seq+ 44086 ChimerSeq STARFusion TCGA_RNA-Seq HELLS-CDH23 HELLS chr10 96336562 + CDH23 chr10 73434869 + Exonic hg19 READ TCGA-AG-A020 8 0 In-Frame Intra-chr q23.33 q22.1 Seq+ 44087 ChimerSeq STARFusion TCGA_RNA-Seq MLLT10-DNAJC1 MLLT10 chr10 22002879 + DNAJC1 chr10 22193541 - Exonic hg19 READ TCGA-AG-A020 6 0 In-Frame Intra-chr p12.31 Oncogene p12.31 44088 ChimerSeq STARFusion TCGA_RNA-Seq HELLS-CDH23 HELLS chr10 96336466 + CDH23 chr10 73434869 + Exonic hg19 READ TCGA-AG-A020 4 0 In-Frame Intra-chr q23.33 q22.1 Seq+ 44089 ChimerSeq STARFusion TCGA_RNA-Seq COX5A-NTRK3 COX5A chr15 75230256 - NTRK3 chr15 88483984 - Exonic hg19 READ TCGA-AG-4001 4 0 In-Frame Intra-chr q24.2 q25.3 Oncogene Tumor suppressor gene 44090 ChimerSeq STARFusion TCGA_RNA-Seq PLXND1-EEFSEC PLXND1 chr3 129324172 - EEFSEC chr3 128126912 + Exonic hg19 READ TCGA-AG-4005 5 0 Out-of-frame Intra-chr q22.1 q21.3 44091 ChimerSeq STARFusion TCGA_RNA-Seq S100A16-RPL14 S100A16 chr1 153579624 - RPL14 chr3 40503526 + Exonic hg19 READ TCGA-AG-4005 3 0 Out-of-frame Inter-chr q21.3 p22.1 44092 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-TYRO3 IGKC chr2 89156966 - TYRO3 chr15 41854865 + Exonic hg19 READ TCGA-AG-4007 4 0 Out-of-frame Inter-chr p11.2 q15.1 TK:Axl 44093 ChimerSeq STARFusion TCGA_RNA-Seq ACSL5-TCF7L2 ACSL5 chr10 114154860 + TCF7L2 chr10 114724315 + Exonic hg19 READ TCGA-AG-4007 3 0 In-Frame Intra-chr q25.2 q25.2 Oncogene Tumor suppressor gene Transcription factor 44094 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC10-RPL31P50 DNAJC10 chr2 183653145 + RPL31P50 chr12 31750085 - Exonic hg19 READ TCGA-AG-4007 3 0 Out-of-frame Inter-chr q32.1 p11.21 44095 ChimerSeq STARFusion TCGA_RNA-Seq TCF25-IGKC TCF25 chr16 89970613 + IGKC chr2 89157196 - Exonic hg19 READ TCGA-AG-4007 3 0 Out-of-frame Inter-chr q24.3 p11.2 44096 ChimerSeq STARFusion TCGA_RNA-Seq TCF7L2-GUCY2GP TCF7L2 chr10 114711366 + GUCY2GP chr10 114077814 - Exonic hg19 READ TCGA-AG-4007 3 0 CDS-3'UTR Intra-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q25.2 44097 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868873 - SLC44A4 chr6 31831427 - Exonic hg19 READ TCGA-AG-4007 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 44098 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 READ TCGA-AG-4007 3 0 Out-of-frame Inter-chr p13.13 q13.1 44099 ChimerSeq STARFusion TCGA_RNA-Seq HOOK2-UXT HOOK2 chr19 12903150 - UXT chrX 47516995 - Exonic hg19 READ TCGA-AG-4008 3 0 Out-of-frame Inter-chr p13.13 p11.23 44100 ChimerSeq STARFusion TCGA_RNA-Seq SOCS7-MIEN1 SOCS7 chr17 36523933 + MIEN1 chr17 37886544 - Exonic hg19 READ TCGA-EI-6509 284 1297 Out-of-frame Intra-chr q12 q12 Seq+ 44101 ChimerSeq STARFusion TCGA_RNA-Seq MRPL45-ARHGAP23 MRPL45 chr17 36455434 + ARHGAP23 chr17 36614346 + Exonic hg19 READ TCGA-EI-6509 127 283 Out-of-frame Intra-chr q12 q12 Seq+ 44102 ChimerSeq STARFusion TCGA_RNA-Seq SRCIN1-LASP1 SRCIN1 chr17 36761886 - LASP1 chr17 37070578 + Exonic hg19 READ TCGA-EI-6509 17 380 Out-of-frame Intra-chr q12 q12 Seq+ 44103 ChimerSeq STARFusion TCGA_RNA-Seq SRCIN1-LASP1 SRCIN1 chr17 36761939 - LASP1 chr17 37070576 + Exonic hg19 READ TCGA-EI-6509 12 380 Out-of-frame Intra-chr q12 q12 Seq+ 44104 ChimerSeq STARFusion TCGA_RNA-Seq SRCIN1-LASP1 SRCIN1 chr17 36761937 - LASP1 chr17 37070578 + Exonic hg19 READ TCGA-EI-6509 9 380 Out-of-frame Intra-chr q12 q12 Seq+ 44105 ChimerSeq STARFusion TCGA_RNA-Seq SRCIN1-LASP1 SRCIN1 chr17 36760732 - LASP1 chr17 37070578 + Exonic hg19 READ TCGA-EI-6509 3 380 Out-of-frame Intra-chr q12 q12 Seq+ 44106 ChimerSeq STARFusion TCGA_RNA-Seq SRCIN1-KRT39 SRCIN1 chr17 36728915 - KRT39 chr17 39115111 - Exonic hg19 READ TCGA-EI-6509 10 21 Out-of-frame Intra-chr q12 Seq+ 44107 ChimerSeq STARFusion TCGA_RNA-Seq SRCIN1-KRT39 SRCIN1 chr17 36731123 - KRT39 chr17 39115111 - Exonic hg19 READ TCGA-EI-6509 3 21 Out-of-frame Intra-chr q12 Seq+ 44108 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP23-STARD3 ARHGAP23 chr17 36614507 + STARD3 chr17 37809734 + Exonic hg19 READ TCGA-EI-6509 4 13 CDS-5'UTR Intra-chr q12 q12 Seq+ 44109 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-IKZF3 ERBB2 chr17 37866134 + IKZF3 chr17 37988404 - Exonic hg19 READ TCGA-EI-6509 2 12 In-Frame Intra-chr q12 Oncogene q21.1 Tumor suppressor gene Transcription factor Seq+ 44110 ChimerSeq STARFusion TCGA_RNA-Seq IKZF3-MRPL45 IKZF3 chr17 37985640 - MRPL45 chr17 36454415 + Exonic hg19 READ TCGA-EI-6509 3 4 Out-of-frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q12 44111 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-IKZF3 GRB7 chr17 37894645 + IKZF3 chr17 37988404 - Exonic hg19 READ TCGA-EI-6509 2 6 5'UTR-CDS Intra-chr q12 q21.1 Tumor suppressor gene Transcription factor Seq+ 44112 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-IL20RA PTPRK chr6 128841404 - IL20RA chr6 137338240 - Exonic hg19 READ TCGA-EI-7002 22 82 In-Frame Intra-chr Tumor suppressor gene q23.3 Seq+ 44113 ChimerSeq STARFusion TCGA_RNA-Seq LHFPL2-PTPRK LHFPL2 chr5 77805607 - PTPRK chr6 128411137 - Exonic hg19 READ TCGA-EI-7002 9 62 In-Frame Inter-chr q14.1 Tumor suppressor gene Seq+ 44114 ChimerSeq STARFusion TCGA_RNA-Seq OPA3-TNPO1 OPA3 chr19 46087881 - TNPO1 chr5 72144212 + Exonic hg19 READ TCGA-EI-7002 2 6 Out-of-frame Inter-chr q13.32 q13.2 Seq+ 44115 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 READ TCGA-AG-A036 3 0 Out-of-frame Inter-chr p13.13 q13.1 44116 ChimerSeq STARFusion TCGA_RNA-Seq C1orf63-MYH9 C1orf63 chr1 25568767 - MYH9 chr22 36677594 - Exonic hg19 READ TCGA-AG-A032 3 0 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene 44117 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-CASC11 PVT1 chr8 128806980 + CASC11 chr8 128746205 - Exonic hg19 READ TCGA-AG-A02X 42 0 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 44118 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-CASC11 PVT1 chr8 128808254 + CASC11 chr8 128746205 - Exonic hg19 READ TCGA-AG-A02X 8 0 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 44119 ChimerSeq STARFusion TCGA_RNA-Seq MUC5B-RN7SL359P MUC5B chr11 1268574 + RN7SL359P chr2 233514679 + Exonic hg19 READ TCGA-AG-A02X 3 0 Out-of-frame Inter-chr p15.5 q37.1 44120 ChimerSeq STARFusion TCGA_RNA-Seq DES-KRT8 DES chr2 220286282 + KRT8 chr12 53292303 - Exonic hg19 READ TCGA-AG-A02X 2 0 In-Frame Inter-chr q35 q13.13 44121 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-CASC8 PVT1 chr8 128806980 + CASC8 chr8 128433208 - Exonic hg19 READ TCGA-AG-A02X 2 0 Out-of-frame Intra-chr q24.21 q24.21 44122 ChimerSeq STARFusion TCGA_RNA-Seq TEAD1-PICALM TEAD1 chr11 12696381 + PICALM chr11 85742653 - Exonic hg19 READ TCGA-AG-A02X 2 0 5'UTR-5'UTR Intra-chr p15.3 Transcription factor q14.2 44123 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHG6-TMBIM1 PLEKHG6 chr12 6428274 + TMBIM1 chr2 219146904 - Exonic hg19 READ TCGA-AG-3732 2 35 CDS-5'UTR Inter-chr p13.31 q35 Seq+ 44124 ChimerSeq STARFusion TCGA_RNA-Seq CDR2L-HID1 CDR2L chr17 72984217 + HID1 chr17 72960727 - Exonic hg19 READ TCGA-AG-3732 3 13 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 44125 ChimerSeq STARFusion TCGA_RNA-Seq TP53I13-CEP112 TP53I13 chr17 27899075 + CEP112 chr17 64173138 - Exonic hg19 READ TCGA-AG-3732 3 11 Out-of-frame Intra-chr q11.2 q24.1 Seq+ 44126 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-CACNA2D2 PVT1 chr8 128808254 + CACNA2D2 chr3 50421768 - Exonic hg19 READ TCGA-AG-3732 3 8 5'UTR-CDS Inter-chr q24.21 p21.31 Seq+ 44127 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-CACNA2D2 PVT1 chr8 128808317 + CACNA2D2 chr3 50421768 - Exonic hg19 READ TCGA-AG-3732 2 8 5'UTR-CDS Inter-chr q24.21 p21.31 Seq+ 44128 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-MTATP8P1 IGH@ chr14 106174467 - MTATP8P1 chr1 569017 + Exonic hg19 READ TCGA-AG-3731 3 7 Out-of-frame Inter-chr 32.33 p36.33 44129 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 READ TCGA-AG-A02N 4 0 Out-of-frame Inter-chr q13.33 p21.1 44130 ChimerSeq STARFusion TCGA_RNA-Seq RPS19-CEACAM5 RPS19 chr19 42365281 + CEACAM5 chr19 42213599 + Exonic hg19 READ TCGA-EI-6506 30 127 In-Frame Intra-chr q13.2 q13.2 Seq+ 44131 ChimerSeq STARFusion TCGA_RNA-Seq RPS19-CEA RPS19 chr19 42365281 + CEA chr19 42213599 + Exonic hg19 READ TCGA-EI-6506 30 121 Out-of-frame Intra-chr q13.2 44132 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-C19orf26 SBNO2 chr19 1112130 - C19orf26 chr19 1228502 - Exonic hg19 READ TCGA-EI-6506 20 72 Out-of-frame Intra-chr p13.3 Seq+ 44133 ChimerSeq STARFusion TCGA_RNA-Seq RPS19-CEA RPS19 chr19 42365281 + CEA chr19 42260508 + Exonic hg19 READ TCGA-EI-6506 3 82 Out-of-frame Intra-chr q13.2 44134 ChimerSeq STARFusion TCGA_RNA-Seq YEATS4-CPSF6 YEATS4 chr12 69764755 + CPSF6 chr12 69663292 + Exonic hg19 READ TCGA-EI-6506 10 39 CDS-3'UTR Intra-chr q15 q15 Seq+ 44135 ChimerSeq STARFusion TCGA_RNA-Seq RFC1-RPL9P8 RFC1 chr4 39352968 - RPL9P8 chr15 83041634 - Exonic hg19 READ TCGA-EI-6506 5 15 Out-of-frame Inter-chr p14 44136 ChimerSeq STARFusion TCGA_RNA-Seq SPINT2-SIPA1L3 SPINT2 chr19 38755638 + SIPA1L3 chr19 38689029 + Exonic hg19 READ TCGA-EI-6506 7 6 In-Frame Intra-chr q13.2 Tumor suppressor gene q13.13 44137 ChimerSeq STARFusion TCGA_RNA-Seq WDR55-ANKHD1 WDR55 chr5 140052531 + ANKHD1 chr5 139884404 + Exonic hg19 READ TCGA-EI-6506 4 5 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 44138 ChimerSeq STARFusion TCGA_RNA-Seq CAPZA1-EFCAB1 CAPZA1 chr1 113162505 + EFCAB1 chr8 49643203 - Exonic hg19 READ TCGA-AG-A02G 3 0 Out-of-frame Inter-chr p13.2 q11.21 Seq+ 44139 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G3-C1orf222 EIF4G3 chr1 21377359 - C1orf222 chr1 1878493 - Exonic hg19 READ TCGA-DC-5337 6 16 Out-of-frame Intra-chr p36.12 Seq+ 44140 ChimerSeq STARFusion TCGA_RNA-Seq GRIN2B-C12orf36 GRIN2B chr12 13683591 - C12orf36 chr12 13529227 - Exonic hg19 READ TCGA-DC-5337 3 9 Out-of-frame Intra-chr p13.1 44141 ChimerSeq STARFusion TCGA_RNA-Seq DCTN2-SRGAP1 DCTN2 chr12 57940811 - SRGAP1 chr12 64377727 + Exonic hg19 SARC TCGA-DX-A3LY-01B 129 1018 Out-of-frame Intra-chr q13.3 q14.2 Seq+ 44142 ChimerSeq STARFusion TCGA_RNA-Seq DCTN2-SRGAP1 DCTN2 chr12 57939811 - SRGAP1 chr12 64377727 + Exonic hg19 SARC TCGA-DX-A3LY-01B 61 1018 Out-of-frame Intra-chr q13.3 q14.2 Seq+ 44143 ChimerSeq STARFusion TCGA_RNA-Seq PA2G4-MARK1 PA2G4 chr12 56498609 + MARK1 chr1 220752696 + Exonic hg19 SARC TCGA-DX-A3LY-01B 11 40 Out-of-frame Inter-chr q13.2 Transcription factor q41 CAMK:CAMKL Oncogene Seq+ 44144 ChimerSeq STARFusion TCGA_RNA-Seq CD55-RGS21 CD55 chr1 207512762 + RGS21 chr1 192335051 + Exonic hg19 SARC TCGA-DX-A3LY-01B 9 41 Out-of-frame Intra-chr q32.2 q31.2 Seq+ 44145 ChimerSeq STARFusion TCGA_RNA-Seq DDX46-TPO DDX46 chr5 134113415 + TPO chr2 1546193 + Exonic hg19 SARC TCGA-DX-A3LY-01B 7 40 In-Frame Inter-chr q31.1 Seq+ 44146 ChimerSeq STARFusion TCGA_RNA-Seq NAA10-TBC1D30 NAA10 chrX 153200337 - TBC1D30 chr12 65258448 + Exonic hg19 SARC TCGA-DX-A3LY-01B 2 24 In-Frame Inter-chr q28 q14.3 Seq+ 44147 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP4-TBC1D30 ARHGAP4 chrX 153200337 - TBC1D30 chr12 65258448 + Exonic hg19 SARC TCGA-DX-A3LY-01B 2 21 5'UTR-CDS Inter-chr q28 q14.3 Seq+ 44148 ChimerSeq STARFusion TCGA_RNA-Seq STK40-OSCP1 STK40 chr1 36851324 - OSCP1 chr1 36904511 - Exonic hg19 SARC TCGA-DX-A3LY-01B 4 12 5'UTR-CDS Intra-chr p34.3 p34.3 Tumor suppressor gene Seq+ 44149 ChimerSeq STARFusion TCGA_RNA-Seq CDK2-ERBB3 CDK2 chr12 56360908 + ERBB3 chr12 56480315 + Exonic hg19 SARC TCGA-DX-A3LY-01B 4 9 Out-of-frame Intra-chr q13.2 CMGC:CDK Tumor suppressor gene q13.2 Oncogene Seq+ 44150 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-NDUFA10 DGKD chr2 234299129 + NDUFA10 chr2 240961757 - Exonic hg19 SARC TCGA-DX-A3LY-01B 2 17 In-Frame Intra-chr Seq+ 44151 ChimerSeq STARFusion TCGA_RNA-Seq TYK2-CIB3 TYK2 chr19 10488890 - CIB3 chr19 16275724 - Exonic hg19 SARC TCGA-DX-A3LY-01B 5 1 In-Frame Intra-chr p13.2 TK:JakA p13.11 Seq+ 44152 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125699 - CXCL16 chr17 4637313 - Exonic hg19 SARC TCGA-DX-A3LY-01B 3 3 Out-of-frame Inter-chr q12.2 p13.2 44153 ChimerSeq STARFusion TCGA_RNA-Seq HDX-ERICH1 HDX chrX 83757350 - ERICH1 chr8 614676 - Exonic hg19 SARC TCGA-DX-A3LY-01B 2 5 5'UTR-CDS Inter-chr q21.1 Transcription factor Seq+ 44154 ChimerSeq STARFusion TCGA_RNA-Seq DTNB-EXOC4 DTNB chr2 25896255 - EXOC4 chr7 133160082 + Exonic hg19 SARC TCGA-DX-A3LY-01B 2 3 5'UTR-CDS Inter-chr p23.3 q33 Seq+ 44155 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-RER1 FRS2 chr12 69880077 + RER1 chr1 2327223 + Exonic hg19 SARC TCGA-DX-A3LY-01B 2 2 5'UTR-5'UTR Inter-chr q15 p36.32 Seq+ 44156 ChimerSeq STARFusion TCGA_RNA-Seq BNC2-C9orf92 BNC2 chr9 16727795 - C9orf92 chr9 16215897 - Exonic hg19 SARC TCGA-WK-A8XY-01A 17 56 Out-of-frame Intra-chr p22.2 Transcription factor p22.3 44157 ChimerSeq STARFusion TCGA_RNA-Seq BNC2-C9orf92 BNC2 chr9 16870644 - C9orf92 chr9 16215897 - Exonic hg19 SARC TCGA-WK-A8XY-01A 5 55 Out-of-frame Intra-chr p22.2 Transcription factor p22.3 44158 ChimerSeq STARFusion TCGA_RNA-Seq COL1A2-MBNL1 COL1A2 chr7 94027071 + MBNL1 chr3 151987554 + Exonic hg19 SARC TCGA-WK-A8XY-01A 8 1 Out-of-frame Inter-chr q21.3 q25.1 44159 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-CPM CPSF6 chr12 69633486 + CPM chr12 69252851 - Exonic hg19 SARC TCGA-DX-A23T-01A 73 357 Out-of-frame Intra-chr q15 q15 Seq+ 44160 ChimerSeq STARFusion TCGA_RNA-Seq GNS-RASSF3 GNS chr12 65136921 - RASSF3 chr12 65078567 + Exonic hg19 SARC TCGA-DX-A23T-01A 67 162 In-Frame Intra-chr q14.3 q14.2 Tumor suppressor gene Seq+ 44161 ChimerSeq STARFusion TCGA_RNA-Seq GBF1-CTDSP2 GBF1 chr10 104005538 + CTDSP2 chr12 58218102 - Exonic hg19 SARC TCGA-DX-A23T-01A 27 139 5'UTR-CDS Inter-chr q24.32 q14.1 Seq+ 44162 ChimerSeq STARFusion TCGA_RNA-Seq PSD3-FGL1 PSD3 chr8 18711608 - FGL1 chr8 17743080 - Exonic hg19 SARC TCGA-DX-A23T-01A 4 92 5'UTR-5'UTR Intra-chr p22 p22 Seq+ 44163 ChimerSeq STARFusion TCGA_RNA-Seq PSD3-FGL1 PSD3 chr8 18725184 - FGL1 chr8 17739688 - Exonic hg19 SARC TCGA-DX-A23T-01A 2 92 Out-of-frame Intra-chr p22 p22 Seq+ 44164 ChimerSeq STARFusion TCGA_RNA-Seq GBF1-TRPC6 GBF1 chr10 104005538 + TRPC6 chr11 101375529 - Exonic hg19 SARC TCGA-DX-A23T-01A 6 44 5'UTR-CDS Inter-chr q24.32 q22.1 Seq+ 44165 ChimerSeq STARFusion TCGA_RNA-Seq UTRN-HEBP2 UTRN chr6 144613043 + HEBP2 chr6 138726282 + Exonic hg19 SARC TCGA-DX-A23T-01A 6 43 Out-of-frame Intra-chr q24.2 q24.1 Seq+ 44166 ChimerSeq STARFusion TCGA_RNA-Seq TBPL1-TDRG1 TBPL1 chr6 134304018 + TDRG1 chr6 40347021 + Exonic hg19 SARC TCGA-DX-A23T-01A 5 33 CDS-5'UTR Intra-chr q23.2 Transcription factor p21.2 Tumor suppressor gene Seq+ 44167 ChimerSeq STARFusion TCGA_RNA-Seq YAP1-RNF130 YAP1 chr11 101985125 + RNF130 chr5 179467647 - Exonic hg19 SARC TCGA-DX-A23T-01A 3 31 Out-of-frame Inter-chr q22.1 Tumor suppressor gene q35.3 Seq+ 44168 ChimerSeq STARFusion TCGA_RNA-Seq GLI3-PGC GLI3 chr7 42187825 - PGC chr6 41704742 - Exonic hg19 SARC TCGA-DX-A23T-01A 5 21 Out-of-frame Inter-chr p14.1 Transcription factor p21.1 Seq+ 44169 ChimerSeq STARFusion TCGA_RNA-Seq OR10J4-IGKJ2 OR10J4 chr1 159402146 + IGKJ2 chr2 89161072 - Exonic hg19 SARC TCGA-DX-A23T-01A 4 0 Out-of-frame Inter-chr q23.2 p11.2 44170 ChimerSeq STARFusion TCGA_RNA-Seq UST-BIRC3 UST chr6 149068813 + BIRC3 chr11 102207491 + Exonic hg19 SARC TCGA-DX-A23T-01A 2 7 In-Frame Inter-chr q25.1 q22.2 Oncogene Seq+ 44171 ChimerSeq STARFusion TCGA_RNA-Seq CSMD1-PPP3CC CSMD1 chr8 4851854 - PPP3CC chr8 22384905 + Exonic hg19 SARC TCGA-DX-A23T-01A 2 4 In-Frame Intra-chr p23.2 Tumor suppressor gene p21.3 Tumor suppressor gene Seq+ 44172 ChimerSeq STARFusion TCGA_RNA-Seq UTRN-AHI1 UTRN chr6 144811335 + AHI1 chr6 135748445 - Exonic hg19 SARC TCGA-DX-A23T-01A 2 1 Out-of-frame Intra-chr q24.2 q23.3 44173 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP1-DNM3OS CTDSP1 chr2 219267128 + DNM3OS chr1 172113577 - Exonic hg19 SARC TCGA-DX-A48J-01A 2 4 CDS-3'UTR Inter-chr q35 q24.3 44174 ChimerSeq STARFusion TCGA_RNA-Seq ZFP90-CDH3 ZFP90 chr16 68592471 + CDH3 chr16 68710288 + Exonic hg19 SARC TCGA-DX-A48J-01A 2 2 In-Frame Intra-chr q22.1 Transcription factor q22.1 44175 ChimerSeq STARFusion TCGA_RNA-Seq ADIPOR2-PHACTR3 ADIPOR2 chr12 1863680 + PHACTR3 chr20 58318162 + Exonic hg19 SARC TCGA-DX-A48J-01A 2 1 Out-of-frame Inter-chr p13.33 q13.32 44176 ChimerSeq STARFusion TCGA_RNA-Seq METTL13-DNM3 METTL13 chr1 171783163 + DNM3 chr1 171890888 + Exonic hg19 SARC TCGA-DX-A48J-01A 2 1 3'UTR-CDS Intra-chr q24.3 q24.3 44177 ChimerSeq STARFusion TCGA_RNA-Seq SUCO-CXorf21 SUCO chr1 172526934 + CXorf21 chrX 30594983 - Exonic hg19 SARC TCGA-DX-A1KY-01A 23 387 Out-of-frame Inter-chr q24.3 p21.2 Seq+ 44178 ChimerSeq STARFusion TCGA_RNA-Seq FAM220A-SCGB1A1 FAM220A chr7 6388204 - SCGB1A1 chr11 62189693 + Exonic hg19 SARC TCGA-DX-A1KY-01A 14 271 5'UTR-CDS Inter-chr p22.1 q12.3 Seq+ 44179 ChimerSeq STARFusion TCGA_RNA-Seq ZDBF2-PSMD1 ZDBF2 chr2 207146633 + PSMD1 chr2 232003450 + Exonic hg19 SARC TCGA-DX-A1KY-01A 28 112 Out-of-frame Intra-chr q37.1 Seq+ 44180 ChimerSeq STARFusion TCGA_RNA-Seq RAB5A-PLCL2 RAB5A chr3 19992553 + PLCL2 chr3 17051166 + Exonic hg19 SARC TCGA-DX-A1KY-01A 17 147 Out-of-frame Intra-chr p24.3 Seq+ 44181 ChimerSeq STARFusion TCGA_RNA-Seq ASH1L-SELL ASH1L chr1 155531944 - SELL chr1 169665694 - Exonic hg19 SARC TCGA-DX-A1KY-01A 18 123 5'UTR-CDS Intra-chr q22 Transcription factor q24.2 Seq+ 44182 ChimerSeq STARFusion TCGA_RNA-Seq ASH1L-SELL ASH1L chr1 155531944 - SELL chr1 169660943 - Exonic hg19 SARC TCGA-DX-A1KY-01A 5 123 5'UTR-CDS Intra-chr q22 Transcription factor q24.2 Seq+ 44183 ChimerSeq STARFusion TCGA_RNA-Seq NUF2-PHEX NUF2 chr1 163310216 + PHEX chrX 22151640 + Exonic hg19 SARC TCGA-DX-A1KY-01A 15 83 In-Frame Inter-chr q23.3 p22.11 Seq+ 44184 ChimerSeq STARFusion TCGA_RNA-Seq SP3-CYBRD1 SP3 chr2 174828489 - CYBRD1 chr2 172409856 + Exonic hg19 SARC TCGA-DX-A1KY-01A 19 18 In-Frame Intra-chr q31.1 Transcription factor q31.1 Seq+ 44185 ChimerSeq STARFusion TCGA_RNA-Seq WDFY1-PARD3B WDFY1 chr2 224809865 - PARD3B chr2 206364620 + Exonic hg19 SARC TCGA-DX-A1KY-01A 9 57 In-Frame Intra-chr q36.1 q33.3 Seq+ 44186 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP24-STAC ARHGAP24 chr4 86396712 + STAC chr3 36570188 + Exonic hg19 SARC TCGA-DX-A1KY-01A 10 43 5'UTR-CDS Inter-chr q21.23 p22.3 Seq+ 44187 ChimerSeq STARFusion TCGA_RNA-Seq ZNF558-CERS4 ZNF558 chr19 8941994 - CERS4 chr19 8326572 + Exonic hg19 SARC TCGA-DX-A1KY-01A 6 55 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.2 Seq+ 44188 ChimerSeq STARFusion TCGA_RNA-Seq RBBP7-TTC24 RBBP7 chrX 16888161 - TTC24 chr1 156552023 + Exonic hg19 SARC TCGA-DX-A1KY-01A 11 33 In-Frame Inter-chr p22.2 Tumor suppressor gene q22 Seq+ 44189 ChimerSeq STARFusion TCGA_RNA-Seq IL11RA-WDR72 IL11RA chr9 34652230 + WDR72 chr15 53889471 - Exonic hg19 SARC TCGA-DX-A1KY-01A 6 49 5'UTR-CDS Inter-chr p13.3 q21.3 Seq+ 44190 ChimerSeq STARFusion TCGA_RNA-Seq CRK-ABR CRK chr17 1340084 - ABR chr17 1028702 - Exonic hg19 SARC TCGA-DX-A1KY-01A 8 32 In-Frame Intra-chr p13.3 p13.3 Seq+ 44191 ChimerSeq STARFusion TCGA_RNA-Seq ZNF558-CERS4 ZNF558 chr19 8941994 - CERS4 chr19 8326814 + Exonic hg19 SARC TCGA-DX-A1KY-01A 2 55 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.2 Seq+ 44192 ChimerSeq STARFusion TCGA_RNA-Seq IL11RA-WDR72 IL11RA chr9 34655662 + WDR72 chr15 53889471 - Exonic hg19 SARC TCGA-DX-A1KY-01A 3 49 Out-of-frame Inter-chr p13.3 q21.3 Seq+ 44193 ChimerSeq STARFusion TCGA_RNA-Seq GRIP1-DAZL GRIP1 chr12 66770954 - DAZL chr3 16633655 - Exonic hg19 SARC TCGA-DX-A1KY-01A 4 43 In-Frame Inter-chr q14.3 p24.3 Seq+ 44194 ChimerSeq STARFusion TCGA_RNA-Seq PPP4R2-FBXW7 PPP4R2 chr3 73047309 + FBXW7 chr4 153333681 - Exonic hg19 SARC TCGA-DX-A1KY-01A 5 39 CDS-5'UTR Inter-chr p13 q31.3 Oncogene Tumor suppressor gene Seq+ 44195 ChimerSeq STARFusion TCGA_RNA-Seq FREM3-Y_RNA FREM3 chr4 144506997 - Y_RNA chr3 74215285 + Exonic hg19 SARC TCGA-DX-A1KY-01A 12 10 Out-of-frame Inter-chr q31.21 44196 ChimerSeq STARFusion TCGA_RNA-Seq IL11RA-WDR72 IL11RA chr9 34657146 + WDR72 chr15 53889471 - Exonic hg19 SARC TCGA-DX-A1KY-01A 2 49 Out-of-frame Inter-chr p13.3 q21.3 Seq+ 44197 ChimerSeq STARFusion TCGA_RNA-Seq ABCF2-WDR86 ABCF2 chr7 150911965 - WDR86 chr7 151093282 - Exonic hg19 SARC TCGA-DX-A1KY-01A 4 38 Out-of-frame Intra-chr q36.1 q36.1 Seq+ 44198 ChimerSeq STARFusion TCGA_RNA-Seq PRDX6-FAM78B PRDX6 chr1 173446631 + FAM78B chr1 166040000 - Exonic hg19 SARC TCGA-DX-A1KY-01A 5 30 In-Frame Intra-chr q25.1 q24.1 Seq+ 44199 ChimerSeq STARFusion TCGA_RNA-Seq MEF2A-SV2B MEF2A chr15 100230633 + SV2B chr15 91795049 + Exonic hg19 SARC TCGA-DX-A1KY-01A 5 27 Out-of-frame Intra-chr q26.3 Transcription factor q26.1 Seq+ 44200 ChimerSeq STARFusion TCGA_RNA-Seq OPA1-LINC00969 OPA1 chr3 193385069 + LINC00969 chr3 195435005 + Exonic hg19 SARC TCGA-DX-A1KY-01A 2 37 Out-of-frame Intra-chr q29 44201 ChimerSeq STARFusion TCGA_RNA-Seq GPR89B-DNM3 GPR89B chr1 147400691 + DNM3 chr1 172222713 + Exonic hg19 SARC TCGA-DX-A1KY-01A 3 32 In-Frame Intra-chr q21.2 q24.3 Seq+ 44202 ChimerSeq STARFusion TCGA_RNA-Seq PIAS1-MEF2A PIAS1 chr15 68346688 + MEF2A chr15 100211528 + Exonic hg19 SARC TCGA-DX-A1KY-01A 9 2 In-Frame Intra-chr q23 Tumor suppressor gene q26.3 Transcription factor Seq+ 44203 ChimerSeq STARFusion TCGA_RNA-Seq GALT-WDR72 GALT chr9 34655662 + WDR72 chr15 53889471 - Exonic hg19 SARC TCGA-DX-A1KY-01A 3 24 3'UTR-CDS Inter-chr p13.3 q21.3 Seq+ 44204 ChimerSeq STARFusion TCGA_RNA-Seq GALT-WDR72 GALT chr9 34649561 + WDR72 chr15 53889471 - Exonic hg19 SARC TCGA-DX-A1KY-01A 2 28 In-Frame Inter-chr p13.3 q21.3 Seq+ 44205 ChimerSeq STARFusion TCGA_RNA-Seq GALT-WDR72 GALT chr9 34648453 + WDR72 chr15 53889471 - Exonic hg19 SARC TCGA-DX-A1KY-01A 2 28 In-Frame Inter-chr p13.3 q21.3 Seq+ 44206 ChimerSeq STARFusion TCGA_RNA-Seq PIAS1-MEF2A PIAS1 chr15 68346688 + MEF2A chr15 100211725 + Exonic hg19 SARC TCGA-DX-A1KY-01A 8 2 In-Frame Intra-chr q23 Tumor suppressor gene q26.3 Transcription factor Seq+ 44207 ChimerSeq STARFusion TCGA_RNA-Seq ARMC9-PARD3B ARMC9 chr2 232104754 + PARD3B chr2 206305094 + Exonic hg19 SARC TCGA-DX-A1KY-01A 4 16 Out-of-frame Intra-chr q37.1 q33.3 Seq+ 44208 ChimerSeq STARFusion TCGA_RNA-Seq GALT-WDR72 GALT chr9 34648453 + WDR72 chr15 53889471 - Exonic hg19 SARC TCGA-DX-A1KY-01A 2 24 In-Frame Inter-chr p13.3 q21.3 Seq+ 44209 ChimerSeq STARFusion TCGA_RNA-Seq DMD-LIX1L DMD chrX 31279072 - LIX1L chr1 145487304 + Exonic hg19 SARC TCGA-DX-A1KY-01A 6 6 In-Frame Inter-chr p21.1 Tumor suppressor gene q21.1 Seq+ 44210 ChimerSeq STARFusion TCGA_RNA-Seq WNT5B-CD163 WNT5B chr12 1755463 + CD163 chr12 7623993 - Exonic hg19 SARC TCGA-DX-A1KY-01A 5 9 3'UTR-3'UTR Intra-chr p13.33 p13.31 Seq+ 44211 ChimerSeq STARFusion TCGA_RNA-Seq LIN7A-GRIP1 LIN7A chr12 81283030 - GRIP1 chr12 66859202 - Exonic hg19 SARC TCGA-DX-A1KY-01A 2 19 Out-of-frame Intra-chr q21.31 q14.3 Seq+ 44212 ChimerSeq STARFusion TCGA_RNA-Seq APOO-ACOT9 APOO chrX 23925811 - ACOT9 chrX 23754133 - Exonic hg19 SARC TCGA-DX-A1KY-01A 2 13 Out-of-frame Intra-chr p22.11 p22.11 Seq+ 44213 ChimerSeq STARFusion TCGA_RNA-Seq APOO-ACOT9 APOO chrX 23925811 - ACOT9 chrX 23780699 - Exonic hg19 SARC TCGA-DX-A1KY-01A 2 13 CDS-5'UTR Intra-chr p22.11 p22.11 Seq+ 44214 ChimerSeq STARFusion TCGA_RNA-Seq TMEM150C-TYW1 TMEM150C chr4 83483059 - TYW1 chr7 66548417 + Exonic hg19 SARC TCGA-DX-A1KY-01A 3 7 5'UTR-CDS Inter-chr q21.22 q11.21 Seq+ 44215 ChimerSeq STARFusion TCGA_RNA-Seq MFAP3-GALNT10 MFAP3 chr5 153529506 + GALNT10 chr5 153674376 + Exonic hg19 SARC TCGA-DX-A1KY-01A 2 5 3'UTR-CDS Intra-chr q33.2 q33.2 44216 ChimerSeq STARFusion TCGA_RNA-Seq PTPN11-OAS1 PTPN11 chr12 112888316 + OAS1 chr12 113354314 + Exonic hg19 SARC TCGA-DX-A3U5-01A 139 823 Out-of-frame Intra-chr q24.13 Oncogene Tumor suppressor gene q24.13 Seq+ 44217 ChimerSeq STARFusion TCGA_RNA-Seq PTPN11-OAS1 PTPN11 chr12 112888316 + OAS1 chr12 113348856 + Exonic hg19 SARC TCGA-DX-A3U5-01A 51 823 Out-of-frame Intra-chr q24.13 Oncogene Tumor suppressor gene q24.13 Seq+ 44218 ChimerSeq STARFusion TCGA_RNA-Seq PLXNC1-TXNRD1 PLXNC1 chr12 94676177 + TXNRD1 chr12 104742131 + Exonic hg19 SARC TCGA-DX-A3U5-01A 79 351 In-Frame Intra-chr q22 Tumor suppressor gene q23.3 Seq+ 44219 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G3-SPSB1 EIF4G3 chr1 21377359 - SPSB1 chr1 9429332 + Exonic hg19 SARC TCGA-DX-A3U5-01A 38 316 5'UTR-3'UTR Intra-chr p36.12 p36.22 Seq+ 44220 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G3-SPSB1 EIF4G3 chr1 21377359 - SPSB1 chr1 9429368 + Exonic hg19 SARC TCGA-DX-A3U5-01A 12 316 5'UTR-3'UTR Intra-chr p36.12 p36.22 Seq+ 44221 ChimerSeq STARFusion TCGA_RNA-Seq TULP3-TEAD4 TULP3 chr12 3018746 + TEAD4 chr12 3120170 + Exonic hg19 SARC TCGA-DX-A3U5-01A 25 156 Out-of-frame Intra-chr p13.33 p13.33 Transcription factor Seq+ 44222 ChimerSeq STARFusion TCGA_RNA-Seq LTA4H-BTBD11 LTA4H chr12 96396738 - BTBD11 chr12 107914264 + Exonic hg19 SARC TCGA-DX-A3U5-01A 19 98 Out-of-frame Intra-chr q23.1 q23.3 Seq+ 44223 ChimerSeq STARFusion TCGA_RNA-Seq CSRP2-SNRPF CSRP2 chr12 77272718 - SNRPF chr12 96254946 + Exonic hg19 SARC TCGA-DX-A3U5-01A 5 146 5'UTR-CDS Intra-chr q21.2 q23.1 Seq+ 44224 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-SBF2 FRS2 chr12 69931763 + SBF2 chr11 9817504 - Exonic hg19 SARC TCGA-DX-A3U5-01A 5 143 5'UTR-CDS Inter-chr q15 p15.4 Seq+ 44225 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-SBF2 FRS2 chr12 69925836 + SBF2 chr11 9817504 - Exonic hg19 SARC TCGA-DX-A3U5-01A 4 143 5'UTR-CDS Inter-chr q15 p15.4 Seq+ 44226 ChimerSeq STARFusion TCGA_RNA-Seq CSRP2-SNRPF CSRP2 chr12 77272743 - SNRPF chr12 96254946 + Exonic hg19 SARC TCGA-DX-A3U5-01A 2 146 5'UTR-CDS Intra-chr q21.2 q23.1 Seq+ 44227 ChimerSeq STARFusion TCGA_RNA-Seq TMTC2-LYZ TMTC2 chr12 83379825 + LYZ chr12 69743888 + Exonic hg19 SARC TCGA-DX-A3U5-01A 14 93 Out-of-frame Intra-chr q21.31 q15 Seq+ 44228 ChimerSeq STARFusion TCGA_RNA-Seq RSF1-PRRC2C RSF1 chr11 77396150 - PRRC2C chr1 171535372 + Exonic hg19 SARC TCGA-DX-A3U5-01A 19 48 In-Frame Inter-chr q14.1 q24.3 Seq+ 44229 ChimerSeq STARFusion TCGA_RNA-Seq SART3-PAH SART3 chr12 108941663 - PAH chr12 103288696 - Exonic hg19 SARC TCGA-DX-A3U5-01A 6 58 Out-of-frame Intra-chr q23.3 q23.2 Seq+ 44230 ChimerSeq STARFusion TCGA_RNA-Seq HECTD4-LTA4H HECTD4 chr12 112819756 - LTA4H chr12 96400187 - Exonic hg19 SARC TCGA-DX-A3U5-01A 10 39 Out-of-frame Intra-chr q24.13 q23.1 Seq+ 44231 ChimerSeq STARFusion TCGA_RNA-Seq PTPRR-SNRPF PTPRR chr12 71314113 - SNRPF chr12 96254946 + Exonic hg19 SARC TCGA-DX-A3U5-01A 6 51 Out-of-frame Intra-chr q15 q23.1 Seq+ 44232 ChimerSeq STARFusion TCGA_RNA-Seq BTBD2-KIAA1109 BTBD2 chr19 1990003 - KIAA1109 chr4 123107191 + Exonic hg19 SARC TCGA-DX-A3U5-01A 11 22 In-Frame Inter-chr p13.3 q27 Seq+ 44233 ChimerSeq STARFusion TCGA_RNA-Seq BTBD11-CMKLR1 BTBD11 chr12 107975081 + CMKLR1 chr12 108687441 - Exonic hg19 SARC TCGA-DX-A3U5-01A 8 27 CDS-5'UTR Intra-chr q23.3 q23.3 Seq+ 44234 ChimerSeq STARFusion TCGA_RNA-Seq ATP2B1-DCDC2 ATP2B1 chr12 90102996 - DCDC2 chr6 24302272 - Exonic hg19 SARC TCGA-DX-A3U5-01A 3 25 5'UTR-CDS Inter-chr q21.33 p22.3 Tumor suppressor gene Seq+ 44235 ChimerSeq STARFusion TCGA_RNA-Seq GNL1-REPS1 GNL1 chr6 30520244 - REPS1 chr6 139242261 - Exonic hg19 SARC TCGA-DX-A3U5-01A 4 19 Out-of-frame Intra-chr q24.1 Seq+ 44236 ChimerSeq STARFusion TCGA_RNA-Seq GRM1-CNOT2 GRM1 chr6 146720835 + CNOT2 chr12 70713078 + Exonic hg19 SARC TCGA-DX-A3U5-01A 6 5 Out-of-frame Inter-chr q24.3 q15 Seq+ 44237 ChimerSeq STARFusion TCGA_RNA-Seq NDUFA9-C12orf4 NDUFA9 chr12 4771801 + C12orf4 chr12 4600400 - Exonic hg19 SARC TCGA-DX-A3U5-01A 2 19 Out-of-frame Intra-chr p13.32 p13.32 Seq+ 44238 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1109-NFKB1 KIAA1109 chr4 123075267 + NFKB1 chr4 103446669 + Exonic hg19 SARC TCGA-DX-A3U5-01A 3 8 5'UTR-5'UTR Intra-chr q27 q24 Oncogene Tumor suppressor gene Transcription factor Seq+ 44239 ChimerSeq STARFusion TCGA_RNA-Seq GPN3-ATXN2 GPN3 chr12 110905961 - ATXN2 chr12 111993723 - Exonic hg19 SARC TCGA-DX-A3U5-01A 2 6 Out-of-frame Intra-chr q24.11 q24.12 Seq+ 44240 ChimerSeq STARFusion TCGA_RNA-Seq SHPRH-B4GALNT1 SHPRH chr6 146285293 - B4GALNT1 chr12 58025916 - Exonic hg19 SARC TCGA-DX-A3U5-01A 2 6 5'UTR-5'UTR Inter-chr q24.3 Tumor suppressor gene q13.3 Seq+ 44241 ChimerSeq STARFusion TCGA_RNA-Seq CCDC149-FGFRL1 CCDC149 chr4 24914439 - FGFRL1 chr4 1015991 + Exonic hg19 SARC TCGA-DX-A3U5-01A 3 1 Out-of-frame Intra-chr p15.2 p16.3 44242 ChimerSeq STARFusion TCGA_RNA-Seq TEKT4P2-TMTC2 TEKT4P2 chr21 9966322 - TMTC2 chr12 83324210 + Exonic hg19 SARC TCGA-DX-A3U5-01A 2 1 3'UTR-CDS Inter-chr p11.2 q21.31 44243 ChimerSeq STARFusion TCGA_RNA-Seq SS18-SSX2 SS18 chr18 23612363 - SSX2 chrX 52729628 - Exonic hg19 SARC TCGA-DX-AB2Z-01A 72 121 Out-of-frame Inter-chr q11.2 p11.22 KB Pub Seq+ 44244 ChimerSeq STARFusion TCGA_RNA-Seq SS18-SSX2 SS18 chr18 23612363 - SSX2 chrX 52813117 - Exonic hg19 SARC TCGA-DX-AB2Z-01A 11 57 CDS-5'UTR Inter-chr q11.2 p11.22 KB Pub Seq+ 44245 ChimerSeq STARFusion TCGA_RNA-Seq CTIF-AJUBA CTIF chr18 46065683 + AJUBA chr14 23447654 - Exonic hg19 SARC TCGA-DX-AB30-01A 26 133 5'UTR-CDS Inter-chr q11.2 Seq+ 44246 ChimerSeq STARFusion TCGA_RNA-Seq CTIF-AJUBA CTIF chr18 46066202 + AJUBA chr14 23447654 - Exonic hg19 SARC TCGA-DX-AB30-01A 21 132 5'UTR-CDS Inter-chr q11.2 Seq+ 44247 ChimerSeq STARFusion TCGA_RNA-Seq USP47-GALNT18 USP47 chr11 11863771 + GALNT18 chr11 11314740 - Exonic hg19 SARC TCGA-DX-AB30-01A 28 40 Out-of-frame Intra-chr p15.3 p15.4 44248 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57763169 + VMP1 chr17 57895073 + Exonic hg19 SARC TCGA-DX-AB30-01A 7 58 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 44249 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57728677 + VMP1 chr17 57889031 + Exonic hg19 SARC TCGA-DX-AB30-01A 2 58 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 44250 ChimerSeq STARFusion TCGA_RNA-Seq CCDC101-NPIPB9 CCDC101 chr16 28565418 + NPIPB9 chr16 28763515 + Exonic hg19 SARC TCGA-DX-AB30-01A 7 6 Out-of-frame Intra-chr p11.2 44251 ChimerSeq STARFusion TCGA_RNA-Seq SENP5-FAM193A SENP5 chr3 196657771 + FAM193A chr4 2673848 + Exonic hg19 SARC TCGA-DX-AB30-01A 2 6 Out-of-frame Inter-chr q29 p16.3 Seq+ 44252 ChimerSeq STARFusion TCGA_RNA-Seq CYP7B1-EPS15 CYP7B1 chr8 65517239 - EPS15 chr1 51946986 - Exonic hg19 SARC TCGA-DX-AB2W-01A 2 21 In-Frame Inter-chr q12.3 p32.3 Seq+ 44253 ChimerSeq STARFusion TCGA_RNA-Seq SLC16A7-NUP107 SLC16A7 chr12 59990017 + NUP107 chr12 69127232 + Exonic hg19 SARC TCGA-DX-A1L0-01A 63 359 5'UTR-CDS Intra-chr q14.1 q15 Seq+ 44254 ChimerSeq STARFusion TCGA_RNA-Seq NHSL1-CDIP1 NHSL1 chr6 138866760 - CDIP1 chr16 4564665 - Exonic hg19 SARC TCGA-DX-A1L0-01A 45 209 Out-of-frame Inter-chr q24.1 p13.3 Seq+ 44255 ChimerSeq STARFusion TCGA_RNA-Seq SLFN5-TBC1D15 SLFN5 chr17 33570162 + TBC1D15 chr12 72307606 + Exonic hg19 SARC TCGA-DX-A1L0-01A 42 142 5'UTR-5'UTR Inter-chr q12 q21.1 Seq+ 44256 ChimerSeq STARFusion TCGA_RNA-Seq HMBOX1-BNIP3L HMBOX1 chr8 28876430 + BNIP3L chr8 26362823 + Exonic hg19 SARC TCGA-DX-A1L0-01A 25 137 CDS-3'UTR Intra-chr p21.1 Transcription factor p21.2 Tumor suppressor gene Seq+ 44257 ChimerSeq STARFusion TCGA_RNA-Seq ZFC3H1-MON2 ZFC3H1 chr12 72050665 - MON2 chr12 62972225 + Exonic hg19 SARC TCGA-DX-A1L0-01A 23 113 Out-of-frame Intra-chr q21.1 q14.1 Seq+ 44258 ChimerSeq STARFusion TCGA_RNA-Seq LGR5-TSPAN8 LGR5 chr12 71834072 + TSPAN8 chr12 71676599 - Exonic hg19 SARC TCGA-DX-A1L0-01A 6 63 CDS-5'UTR Intra-chr q21.1 q21.1 Seq+ 44259 ChimerSeq STARFusion TCGA_RNA-Seq C1orf21-INTS7 C1orf21 chr1 184567595 + INTS7 chr1 212126043 - Exonic hg19 SARC TCGA-DX-A1L0-01A 11 42 Out-of-frame Intra-chr q25.3 q32.3 Seq+ 44260 ChimerSeq STARFusion TCGA_RNA-Seq MON2-TBC1D15 MON2 chr12 62960230 + TBC1D15 chr12 72265850 + Exonic hg19 SARC TCGA-DX-A1L0-01A 5 44 In-Frame Intra-chr q14.1 q21.1 Seq+ 44261 ChimerSeq STARFusion TCGA_RNA-Seq REV3L-TRAF3IP2 REV3L chr6 111803953 - TRAF3IP2 chr6 111897024 - Exonic hg19 SARC TCGA-DX-A1L0-01A 4 48 Out-of-frame Intra-chr q21 q21 Seq+ 44262 ChimerSeq STARFusion TCGA_RNA-Seq CPM-MON2 CPM chr12 69326458 - MON2 chr12 62926218 + Exonic hg19 SARC TCGA-DX-A1L0-01A 5 40 Out-of-frame Intra-chr q15 q14.1 Seq+ 44263 ChimerSeq STARFusion TCGA_RNA-Seq MARS-MSRB3 MARS chr12 57898082 + MSRB3 chr12 65881784 + Exonic hg19 SARC TCGA-DX-A1L0-01A 5 40 CDS-3'UTR Intra-chr q13.3 q14.3 Seq+ 44264 ChimerSeq STARFusion TCGA_RNA-Seq ATP9B-LUC7L ATP9B chr18 76953263 + LUC7L chr16 258187 - Exonic hg19 SARC TCGA-DX-A1L0-01A 5 36 In-Frame Inter-chr p13.3 Seq+ 44265 ChimerSeq STARFusion TCGA_RNA-Seq REV3L-TRAF3IP2 REV3L chr6 111793216 - TRAF3IP2 chr6 111897024 - Exonic hg19 SARC TCGA-DX-A1L0-01A 2 48 CDS-3'UTR Intra-chr q21 q21 Seq+ 44266 ChimerSeq STARFusion TCGA_RNA-Seq RAB21-FRS2 RAB21 chr12 72167802 + FRS2 chr12 69955960 + Exonic hg19 SARC TCGA-DX-A1L0-01A 4 30 CDS-5'UTR Intra-chr q21.1 q15 Seq+ 44267 ChimerSeq STARFusion TCGA_RNA-Seq DIAPH2-RAB3IP DIAPH2 chrX 95940189 + RAB3IP chr12 70149164 + Exonic hg19 SARC TCGA-DX-A1L0-01A 4 25 Out-of-frame Inter-chr q21.33 q15 Seq+ 44268 ChimerSeq STARFusion TCGA_RNA-Seq HMGA2-ARFGAP2 HMGA2 chr12 66219161 + ARFGAP2 chr11 47193884 - Exonic hg19 SARC TCGA-DX-A1L0-01A 3 28 Out-of-frame Inter-chr q14.3 Transcription factor p11.2 Seq+ 44269 ChimerSeq STARFusion TCGA_RNA-Seq ANKH-DNAH5 ANKH chr5 14871461 - DNAH5 chr5 13737604 - Exonic hg19 SARC TCGA-DX-A1L0-01A 5 19 In-Frame Intra-chr p15.2 p15.2 Seq+ 44270 ChimerSeq STARFusion TCGA_RNA-Seq ATP9B-ATRX ATP9B chr18 76856649 + ATRX chrX 76909690 - Exonic hg19 SARC TCGA-DX-A1L0-01A 4 20 In-Frame Inter-chr q21.1 Oncogene Seq+ 44271 ChimerSeq STARFusion TCGA_RNA-Seq HMGA2-ARFGAP2 HMGA2 chr12 66219161 + ARFGAP2 chr11 47193351 - Exonic hg19 SARC TCGA-DX-A1L0-01A 2 28 In-Frame Inter-chr q14.3 Transcription factor p11.2 Seq+ 44272 ChimerSeq STARFusion TCGA_RNA-Seq NFIC-IL4I1 NFIC chr19 3382241 + IL4I1 chr19 50394364 - Exonic hg19 SARC TCGA-DX-A1L0-01A 3 19 Out-of-frame Intra-chr p13.3 Transcription factor q13.33 Seq+ 44273 ChimerSeq STARFusion TCGA_RNA-Seq ANKH-DNAH5 ANKH chr5 14871461 - DNAH5 chr5 13736041 - Exonic hg19 SARC TCGA-DX-A1L0-01A 2 19 Out-of-frame Intra-chr p15.2 p15.2 Seq+ 44274 ChimerSeq STARFusion TCGA_RNA-Seq HMGA2-RHBG HMGA2 chr12 66221867 + RHBG chr1 156340976 + Exonic hg19 SARC TCGA-DX-A1L0-01A 6 0 In-Frame Inter-chr q14.3 Transcription factor q22 Seq+ 44275 ChimerSeq STARFusion TCGA_RNA-Seq XPR1-TNR XPR1 chr1 180601406 + TNR chr1 175497505 - Exonic hg19 SARC TCGA-DX-A1L0-01A 3 9 CDS-5'UTR Intra-chr q25.3 q25.1 Seq+ 44276 ChimerSeq STARFusion TCGA_RNA-Seq EML1-BASP1 EML1 chr14 100317372 + BASP1 chr5 17275317 + Exonic hg19 SARC TCGA-DX-A1L0-01A 2 11 CDS-5'UTR Inter-chr q32.2 p15.1 Tumor suppressor gene Seq+ 44277 ChimerSeq STARFusion TCGA_RNA-Seq RBFA-MRPS35 RBFA chr18 77796710 + MRPS35 chr12 27890472 + Exonic hg19 SARC TCGA-DX-A1L0-01A 4 2 In-Frame Inter-chr q23 p11.22 Seq+ 44278 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-CHMP1A CPSF6 chr12 69656342 + CHMP1A chr16 89713739 - Exonic hg19 SARC TCGA-DX-A1L0-01A 2 3 3'UTR-3'UTR Inter-chr q15 q24.3 Seq+ 44279 ChimerSeq STARFusion TCGA_RNA-Seq KANK1-DNAH5 KANK1 chr9 504754 + DNAH5 chr5 13931353 - Exonic hg19 SARC TCGA-DX-A1L0-01A 2 3 5'UTR-CDS Inter-chr p24.3 Tumor suppressor gene p15.2 Seq+ 44280 ChimerSeq STARFusion TCGA_RNA-Seq PDE8A-ATF5 PDE8A chr15 85525579 + ATF5 chr19 50432500 + Exonic hg19 SARC TCGA-DX-A1L0-01A 2 3 CDS-5'UTR Inter-chr q25.3 q13.33 Transcription factor Seq+ 44281 ChimerSeq STARFusion TCGA_RNA-Seq REV3L-FYN REV3L chr6 111803953 - FYN chr6 111983150 - Exonic hg19 SARC TCGA-DX-A1L0-01A 2 3 In-Frame Intra-chr q21 q21 TK:Src Seq+ 44282 ChimerSeq STARFusion TCGA_RNA-Seq TIAM2-PPIL4 TIAM2 chr6 155486543 + PPIL4 chr6 149826840 - Exonic hg19 SARC TCGA-DX-A1L0-01A 2 3 In-Frame Intra-chr q25.2 q25.1 Seq+ 44283 ChimerSeq STARFusion TCGA_RNA-Seq ABCC4-PCCA ABCC4 chr13 95858786 - PCCA chr13 100755137 + Exonic hg19 SARC TCGA-DX-A1L0-01A 2 0 In-Frame Intra-chr q32.1 q32.3 44284 ChimerSeq STARFusion TCGA_RNA-Seq MIR145-ARHGEF37 MIR145 chr5 148811187 + ARHGEF37 chr5 148998424 + Exonic hg19 SARC TCGA-DX-A7EL-01A 3 26 Out-of-frame Intra-chr q32 Tumor suppressor gene q32 44285 ChimerSeq STARFusion TCGA_RNA-Seq SS18-SSX2 SS18 chr18 23612363 - SSX2 chrX 52729628 - Exonic hg19 SARC TCGA-FX-A8OO-01A 53 104 Out-of-frame Inter-chr q11.2 p11.22 KB Pub Seq+ 44286 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP1-DNM3OS CTDSP1 chr2 219267128 + DNM3OS chr1 172113577 - Exonic hg19 SARC TCGA-FX-A8OO-01A 3 1 CDS-3'UTR Inter-chr q35 q24.3 44287 ChimerSeq STARFusion TCGA_RNA-Seq UQCRFS1-VSTM2B UQCRFS1 chr19 29703812 - VSTM2B chr19 30054753 + Exonic hg19 SARC TCGA-DX-A6B9-01A 30 90 In-Frame Intra-chr q12 q12 Seq+ 44288 ChimerSeq STARFusion TCGA_RNA-Seq DOT1L-PSG11 DOT1L chr19 2164264 + PSG11 chr19 43523200 - Exonic hg19 SARC TCGA-DX-A6B9-01A 34 55 Out-of-frame Intra-chr p13.3 Oncogene Transcription factor q13.31 Seq+ 44289 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-C17orf97 SEPT9 chr17 75303279 + C17orf97 chr17 273271 + Exonic hg19 SARC TCGA-DX-A6B9-01A 3 21 CDS-3'UTR Intra-chr Seq+ 44290 ChimerSeq STARFusion TCGA_RNA-Seq CNDP2-MYH11 CNDP2 chr18 72186271 + MYH11 chr16 15815373 - Exonic hg19 SARC TCGA-DX-A6B9-01A 6 0 Out-of-frame Inter-chr q22.3 Tumor suppressor gene Oncogene 44291 ChimerSeq STARFusion TCGA_RNA-Seq LINC00473-PDE10A LINC00473 chr6 166401017 - PDE10A chr6 166195411 - Exonic hg19 SARC TCGA-DX-A6B9-01A 3 10 3'UTR-5'UTR Intra-chr q27 q27 44292 ChimerSeq STARFusion TCGA_RNA-Seq PYCR1-BRI3BP PYCR1 chr17 79894624 - BRI3BP chr12 125497080 + Exonic hg19 SARC TCGA-DX-A6B9-01A 2 11 Out-of-frame Inter-chr q25.3 q24.31 Seq+ 44293 ChimerSeq STARFusion TCGA_RNA-Seq CHFR-ZNF565 CHFR chr12 133430017 - ZNF565 chr19 36686058 - Exonic hg19 SARC TCGA-DX-A6B9-01A 2 4 Out-of-frame Inter-chr q24.33 Tumor suppressor gene q13.12 Transcription factor Seq+ 44294 ChimerSeq STARFusion TCGA_RNA-Seq CRAMP1L-TMEM204 CRAMP1L chr16 1676167 + TMEM204 chr16 1604783 + Exonic hg19 SARC TCGA-DX-A3M2-01A 12 20 Out-of-frame Intra-chr p13.3 Seq+ 44295 ChimerSeq STARFusion TCGA_RNA-Seq NCOA3-PLK1S1 NCOA3 chr20 46251074 + PLK1S1 chr20 21209649 + Exonic hg19 SARC TCGA-DX-A3M2-01A 2 1 Out-of-frame Intra-chr q13.12 Transcription factor 44296 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-RBPJ TPX2 chr20 30327424 + RBPJ chr4 26387975 + Exonic hg19 SARC TCGA-DX-A3M2-01A 2 1 5'UTR-CDS Inter-chr q11.21 p15.2 Transcription factor 44297 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-SPATS2 MDM2 chr12 69233581 + SPATS2 chr12 49883248 + Exonic hg19 SARC TCGA-RN-AAAQ-01A 83 279 In-Frame Intra-chr q15 Oncogene q13.12 44298 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D15-CPM TBC1D15 chr12 72233591 + CPM chr12 69252851 - Exonic hg19 SARC TCGA-RN-AAAQ-01A 54 56 Out-of-frame Intra-chr q21.1 q15 Seq+ 44299 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-LGR5 CTDSP2 chr12 58217687 - LGR5 chr12 71946853 + Exonic hg19 SARC TCGA-RN-AAAQ-01A 26 147 Out-of-frame Intra-chr q14.1 q21.1 Seq+ 44300 ChimerSeq STARFusion TCGA_RNA-Seq FBXL7-MRPL51 FBXL7 chr5 15500822 + MRPL51 chr12 6602138 - Exonic hg19 SARC TCGA-RN-AAAQ-01A 19 87 In-Frame Inter-chr p15.1 p13.31 Seq+ 44301 ChimerSeq STARFusion TCGA_RNA-Seq TM7SF3-KCNC2 TM7SF3 chr12 27143383 - KCNC2 chr12 75445097 - Exonic hg19 SARC TCGA-RN-AAAQ-01A 13 82 Out-of-frame Intra-chr p11.23 q21.1 Seq+ 44302 ChimerSeq STARFusion TCGA_RNA-Seq DSE-PLEKHG1 DSE chr6 116720825 + PLEKHG1 chr6 151130241 + Exonic hg19 SARC TCGA-RN-AAAQ-01A 10 83 Out-of-frame Intra-chr q22.1 q25.1 Seq+ 44303 ChimerSeq STARFusion TCGA_RNA-Seq GRIN2B-MYF6 GRIN2B chr12 14132862 - MYF6 chr12 81101634 + Exonic hg19 SARC TCGA-RN-AAAQ-01A 12 73 5'UTR-CDS Intra-chr p13.1 q21.31 Transcription factor Seq+ 44304 ChimerSeq STARFusion TCGA_RNA-Seq METTL21B-PTPRR METTL21B chr12 58166911 + PTPRR chr12 71158558 - Exonic hg19 SARC TCGA-RN-AAAQ-01A 17 51 Out-of-frame Intra-chr q15 Seq+ 44305 ChimerSeq STARFusion TCGA_RNA-Seq DSE-PLEKHG1 DSE chr6 116720829 + PLEKHG1 chr6 151130241 + Exonic hg19 SARC TCGA-RN-AAAQ-01A 7 83 Out-of-frame Intra-chr q22.1 q25.1 Seq+ 44306 ChimerSeq STARFusion TCGA_RNA-Seq ANKH-STEAP3 ANKH chr5 14871461 - STEAP3 chr2 120003065 + Exonic hg19 SARC TCGA-RN-AAAQ-01A 15 45 Out-of-frame Inter-chr p15.2 q14.2 Seq+ 44307 ChimerSeq STARFusion TCGA_RNA-Seq TM7SF3-KCNC2 TM7SF3 chr12 27148170 - KCNC2 chr12 75445097 - Exonic hg19 SARC TCGA-RN-AAAQ-01A 2 82 In-Frame Intra-chr p11.23 q21.1 Seq+ 44308 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHB2-GABRR1 PLEKHB2 chr2 131862971 + GABRR1 chr6 89910984 - Exonic hg19 SARC TCGA-RN-AAAQ-01A 4 72 5'UTR-5'UTR Inter-chr q21.1 q15 Seq+ 44309 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN31-ITPR2 TSPAN31 chr12 58140539 + ITPR2 chr12 26648193 - Exonic hg19 SARC TCGA-RN-AAAQ-01A 8 54 Out-of-frame Intra-chr q14.1 p11.23 Seq+ 44310 ChimerSeq STARFusion TCGA_RNA-Seq ISCA1-WWP1 ISCA1 chr9 88897293 - WWP1 chr8 87447681 + Exonic hg19 SARC TCGA-RN-AAAQ-01A 10 43 Out-of-frame Inter-chr q21.33 q21.3 Seq+ 44311 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHB2-GABRR1 PLEKHB2 chr2 131862971 + GABRR1 chr6 89913204 - Exonic hg19 SARC TCGA-RN-AAAQ-01A 3 71 5'UTR-CDS Inter-chr q21.1 q15 Seq+ 44312 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHB2-GABRR1 PLEKHB2 chr2 131862971 + GABRR1 chr6 89914413 - Exonic hg19 SARC TCGA-RN-AAAQ-01A 2 71 5'UTR-5'UTR Inter-chr q21.1 q15 Seq+ 44313 ChimerSeq STARFusion TCGA_RNA-Seq MSRA-SPAG11B MSRA chr8 9912168 + SPAG11B chr8 7320381 - Exonic hg19 SARC TCGA-RN-AAAQ-01A 9 33 In-Frame Intra-chr p23.1 p23.1 Seq+ 44314 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN31-ITPR2 TSPAN31 chr12 58140503 + ITPR2 chr12 26648193 - Exonic hg19 SARC TCGA-RN-AAAQ-01A 5 49 In-Frame Intra-chr q14.1 p11.23 Seq+ 44315 ChimerSeq STARFusion TCGA_RNA-Seq WBP11-LGR5 WBP11 chr12 14956286 - LGR5 chr12 71898394 + Exonic hg19 SARC TCGA-RN-AAAQ-01A 7 41 5'UTR-CDS Intra-chr p12.3 q21.1 Seq+ 44316 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN31-ITPR2 TSPAN31 chr12 58140551 + ITPR2 chr12 26648193 - Exonic hg19 SARC TCGA-RN-AAAQ-01A 4 49 Out-of-frame Intra-chr q14.1 p11.23 Seq+ 44317 ChimerSeq STARFusion TCGA_RNA-Seq TXLNB-PDLIM1 TXLNB chr6 139609615 - PDLIM1 chr10 96998444 - Exonic hg19 SARC TCGA-RN-AAAQ-01A 7 36 Out-of-frame Inter-chr q24.1 q23.33 Seq+ 44318 ChimerSeq STARFusion TCGA_RNA-Seq FHL1-TSPAN31 FHL1 chrX 135252139 + TSPAN31 chr12 58140372 + Exonic hg19 SARC TCGA-RN-AAAQ-01A 9 27 5'UTR-CDS Inter-chr q26.3 Tumor suppressor gene q14.1 Seq+ 44319 ChimerSeq STARFusion TCGA_RNA-Seq METTL21B-PTPRR METTL21B chr12 58166856 + PTPRR chr12 71158558 - Exonic hg19 SARC TCGA-RN-AAAQ-01A 3 51 Out-of-frame Intra-chr q15 Seq+ 44320 ChimerSeq STARFusion TCGA_RNA-Seq WBP11-LGR5 WBP11 chr12 14953686 - LGR5 chr12 71898394 + Exonic hg19 SARC TCGA-RN-AAAQ-01A 5 41 Out-of-frame Intra-chr p12.3 q21.1 Seq+ 44321 ChimerSeq STARFusion TCGA_RNA-Seq WBP11-LGR5 WBP11 chr12 14954254 - LGR5 chr12 71898394 + Exonic hg19 SARC TCGA-RN-AAAQ-01A 3 41 Out-of-frame Intra-chr p12.3 q21.1 Seq+ 44322 ChimerSeq STARFusion TCGA_RNA-Seq PRPF40B-CDH4 PRPF40B chr12 49962506 + CDH4 chr20 60448784 + Exonic hg19 SARC TCGA-RN-AAAQ-01A 10 11 5'UTR-CDS Inter-chr q13.12 q13.33 Tumor suppressor gene Seq+ 44323 ChimerSeq STARFusion TCGA_RNA-Seq FGFR1OP2-ASUN FGFR1OP2 chr12 27091643 + ASUN chr12 27081838 - Exonic hg19 SARC TCGA-RN-AAAQ-01A 3 32 5'UTR-CDS Intra-chr p11.23 44324 ChimerSeq STARFusion TCGA_RNA-Seq SLIT3-ITPR2 SLIT3 chr5 168620483 - ITPR2 chr12 26943160 - Exonic hg19 SARC TCGA-RN-AAAQ-01A 5 22 In-Frame Inter-chr q35.1 p11.23 Seq+ 44325 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPK-NR6A1 HNRNPK chr9 86592604 - NR6A1 chr9 127316849 - Exonic hg19 SARC TCGA-RN-AAAQ-01A 5 20 Out-of-frame Intra-chr q21.32 q33.3 Transcription factor Seq+ 44326 ChimerSeq STARFusion TCGA_RNA-Seq PTCH1-IPPK PTCH1 chr9 98268689 - IPPK chr9 95381847 - Exonic hg19 SARC TCGA-RN-AAAQ-01A 6 16 Out-of-frame Intra-chr q22.32 Oncogene Tumor suppressor gene q22.31 Seq+ 44327 ChimerSeq STARFusion TCGA_RNA-Seq DMXL1-NANS DMXL1 chr5 118407351 + NANS chr9 100843098 + Exonic hg19 SARC TCGA-RN-AAAQ-01A 2 30 In-Frame Inter-chr q23.1 q22.33 Seq+ 44328 ChimerSeq STARFusion TCGA_RNA-Seq TULP3-CCSER2 TULP3 chr12 3043727 + CCSER2 chr10 86177527 + Exonic hg19 SARC TCGA-RN-AAAQ-01A 5 17 Out-of-frame Inter-chr p13.33 q23.1 Seq+ 44329 ChimerSeq STARFusion TCGA_RNA-Seq CDH4-DPPA3 CDH4 chr20 60448956 + DPPA3 chr12 7867779 + Exonic hg19 SARC TCGA-RN-AAAQ-01A 2 28 Out-of-frame Inter-chr q13.33 Tumor suppressor gene p13.31 Seq+ 44330 ChimerSeq STARFusion TCGA_RNA-Seq TEAD4-MAP3K12 TEAD4 chr12 3069206 + MAP3K12 chr12 53880929 - Exonic hg19 SARC TCGA-RN-AAAQ-01A 3 24 5'UTR-CDS Intra-chr p13.33 Transcription factor q13.13 Seq+ 44331 ChimerSeq STARFusion TCGA_RNA-Seq MED21-PIP5K1C MED21 chr12 27175554 + PIP5K1C chr19 3661999 - Exonic hg19 SARC TCGA-RN-AAAQ-01A 4 19 In-Frame Inter-chr p11.23 p13.3 Seq+ 44332 ChimerSeq STARFusion TCGA_RNA-Seq PIK3C2G-CTDSP2 PIK3C2G chr12 18435693 + CTDSP2 chr12 58218102 - Exonic hg19 SARC TCGA-RN-AAAQ-01A 5 10 In-Frame Intra-chr p12.3 q14.1 Seq+ 44333 ChimerSeq STARFusion TCGA_RNA-Seq DCSTAMP-TSPAN31 DCSTAMP chr8 105352668 + TSPAN31 chr12 58140372 + Exonic hg19 SARC TCGA-RN-AAAQ-01A 2 21 5'UTR-CDS Inter-chr q22.3 q14.1 Seq+ 44334 ChimerSeq STARFusion TCGA_RNA-Seq CDH4-DPPA3 CDH4 chr20 60448956 + DPPA3 chr12 7868794 + Exonic hg19 SARC TCGA-RN-AAAQ-01A 2 20 In-Frame Inter-chr q13.33 Tumor suppressor gene p13.31 Seq+ 44335 ChimerSeq STARFusion TCGA_RNA-Seq FHL1-DCSTAMP FHL1 chrX 135252139 + DCSTAMP chr8 105352034 + Exonic hg19 SARC TCGA-RN-AAAQ-01A 2 17 5'UTR-5'UTR Inter-chr q26.3 Tumor suppressor gene q22.3 Seq+ 44336 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L5-FZR1 EPB41L5 chr2 120799686 + FZR1 chr19 3522954 + Exonic hg19 SARC TCGA-RN-AAAQ-01A 3 11 CDS-5'UTR Inter-chr q14.2 p13.3 Oncogene Tumor suppressor gene Seq+ 44337 ChimerSeq STARFusion TCGA_RNA-Seq CCT5-SVEP1 CCT5 chr5 10258647 + SVEP1 chr9 113198784 - Exonic hg19 SARC TCGA-RN-AAAQ-01A 2 14 Out-of-frame Inter-chr p15.2 q31.3 Seq+ 44338 ChimerSeq STARFusion TCGA_RNA-Seq USP54-ADK USP54 chr10 75385695 - ADK chr10 76285014 + Exonic hg19 SARC TCGA-RN-AAAQ-01A 4 6 5'UTR-CDS Intra-chr q22.2 q22.2 Seq+ 44339 ChimerSeq STARFusion TCGA_RNA-Seq CELF2-GABRR1 CELF2 chr10 11060126 + GABRR1 chr6 89913204 - Exonic hg19 SARC TCGA-RN-AAAQ-01A 3 9 In-Frame Inter-chr p14 q15 Seq+ 44340 ChimerSeq STARFusion TCGA_RNA-Seq CELF2-GABRR1 CELF2 chr10 11060126 + GABRR1 chr6 89895169 - Exonic hg19 SARC TCGA-RN-AAAQ-01A 3 9 Out-of-frame Inter-chr p14 q15 Seq+ 44341 ChimerSeq STARFusion TCGA_RNA-Seq PPIL4-DCTN2 PPIL4 chr6 149842196 - DCTN2 chr12 57929628 - Exonic hg19 SARC TCGA-RN-AAAQ-01A 2 12 Out-of-frame Inter-chr q25.1 q13.3 Seq+ 44342 ChimerSeq STARFusion TCGA_RNA-Seq GALNT12-ROR2 GALNT12 chr9 101570351 + ROR2 chr9 94325611 - Exonic hg19 SARC TCGA-RN-AAAQ-01A 3 7 CDS-3'UTR Intra-chr q22.33 q22.31 TK:Ror Tumor suppressor gene Seq+ 44343 ChimerSeq STARFusion TCGA_RNA-Seq KATNA1-RALYL KATNA1 chr6 149969605 - RALYL chr8 85441534 + Exonic hg19 SARC TCGA-RN-AAAQ-01A 2 6 5'UTR-5'UTR Inter-chr q25.1 q21.2 Seq+ 44344 ChimerSeq STARFusion TCGA_RNA-Seq LAMP2-LGR5 LAMP2 chrX 119602757 - LGR5 chr12 71946853 + Exonic hg19 SARC TCGA-RN-AAAQ-01A 2 5 Out-of-frame Inter-chr q24 q21.1 44345 ChimerSeq STARFusion TCGA_RNA-Seq TMCO3-ATP11A TMCO3 chr13 114193822 + ATP11A chr13 113371636 + Exonic hg19 SARC TCGA-KF-A41W-01A 80 570 Out-of-frame Intra-chr q34 q34 Seq+ 44346 ChimerSeq STARFusion TCGA_RNA-Seq CUL4A-F7 CUL4A chr13 113893865 + F7 chr13 113771787 + Exonic hg19 SARC TCGA-KF-A41W-01A 7 31 In-Frame Intra-chr q34 q34 Seq+ 44347 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A14-IL4I1 SLC39A14 chr8 22224921 + IL4I1 chr19 50399310 - Exonic hg19 SARC TCGA-KF-A41W-01A 2 13 5'UTR-CDS Inter-chr p21.3 q13.33 Seq+ 44348 ChimerSeq STARFusion TCGA_RNA-Seq TSHZ1-RNASEH2B TSHZ1 chr18 72923871 + RNASEH2B chr13 51501543 + Exonic hg19 SARC TCGA-KF-A41W-01A 2 10 5'UTR-CDS Inter-chr q22.3 Transcription factor q14.3 Seq+ 44349 ChimerSeq STARFusion TCGA_RNA-Seq FLNB-SLMAP FLNB chr3 58124256 + SLMAP chr3 57843460 + Exonic hg19 SARC TCGA-KF-A41W-01A 2 3 In-Frame Intra-chr p14.3 p14.3 Seq+ 44350 ChimerSeq STARFusion TCGA_RNA-Seq SAMD11-PROZ SAMD11 chr1 861393 + PROZ chr13 113824727 + Exonic hg19 SARC TCGA-KF-A41W-01A 2 1 In-Frame Inter-chr p36.33 q34 Seq+ 44351 ChimerSeq STARFusion TCGA_RNA-Seq XYLT1-FAM86A XYLT1 chr16 17564291 - FAM86A chr16 5145515 - Exonic hg19 SARC TCGA-QC-A6FX-01A 7 22 In-Frame Intra-chr p12.3 Seq+ 44352 ChimerSeq STARFusion TCGA_RNA-Seq ANKFN1-PRR11 ANKFN1 chr17 54576459 + PRR11 chr17 57247109 + Exonic hg19 SARC TCGA-QC-A6FX-01A 8 15 3'UTR-5'UTR Intra-chr q22 q22 Seq+ 44353 ChimerSeq STARFusion TCGA_RNA-Seq STXBP5-SASH1 STXBP5 chr6 147560406 + SASH1 chr6 148789681 + Exonic hg19 SARC TCGA-QC-A6FX-01A 9 6 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene Seq+ 44354 ChimerSeq STARFusion TCGA_RNA-Seq MRPL18-C6orf118 MRPL18 chr6 160212158 + C6orf118 chr6 165703556 - Exonic hg19 SARC TCGA-QC-A6FX-01A 4 20 Out-of-frame Intra-chr q25.3 q27 Seq+ 44355 ChimerSeq STARFusion TCGA_RNA-Seq ZNF507-LINC00662 ZNF507 chr19 32851524 + LINC00662 chr19 28206766 - Exonic hg19 SARC TCGA-QC-A6FX-01A 5 16 Out-of-frame Intra-chr q13.11 Transcription factor q11 44356 ChimerSeq STARFusion TCGA_RNA-Seq PTRH2-ANKFN1 PTRH2 chr17 57784732 - ANKFN1 chr17 54305278 + Exonic hg19 SARC TCGA-QC-A6FX-01A 6 2 5'UTR-CDS Intra-chr q23.1 q22 Seq+ 44357 ChimerSeq STARFusion TCGA_RNA-Seq ZNF730-CEP89 ZNF730 chr19 23299978 + CEP89 chr19 33392318 - Exonic hg19 SARC TCGA-QC-A6FX-01A 3 13 Out-of-frame Intra-chr p12 Transcription factor q13.11 Seq+ 44358 ChimerSeq STARFusion TCGA_RNA-Seq RHOA-C3orf84 RHOA chr3 49412867 - C3orf84 chr3 49215971 - Exonic hg19 SARC TCGA-QC-A6FX-01A 3 9 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Seq+ 44359 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L2-ADGB EPB41L2 chr6 131384295 - ADGB chr6 146956511 + Exonic hg19 SARC TCGA-QC-A6FX-01A 3 7 5'UTR-CDS Intra-chr q23.2 q24.3 Seq+ 44360 ChimerSeq STARFusion TCGA_RNA-Seq PHF20-RBM39 PHF20 chr20 34389527 + RBM39 chr20 34330035 - Exonic hg19 SARC TCGA-QC-A6FX-01A 2 10 CDS-5'UTR Intra-chr q11.22 Transcription factor q11.22 44361 ChimerSeq STARFusion TCGA_RNA-Seq RHOA-CCDC71 RHOA chr3 49412867 - CCDC71 chr3 49201693 - Exonic hg19 SARC TCGA-QC-A6FX-01A 2 8 CDS-5'UTR Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Seq+ 44362 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-LGALS3BP SEPT9 chr17 75398785 + LGALS3BP chr17 76968656 - Exonic hg19 SARC TCGA-QC-A6FX-01A 3 4 Out-of-frame Intra-chr q25.3 Seq+ 44363 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-DNAI2 SEPT9 chr17 75398785 + DNAI2 chr17 72285733 + Exonic hg19 SARC TCGA-QC-A6FX-01A 2 6 Out-of-frame Intra-chr q25.1 Seq+ 44364 ChimerSeq STARFusion TCGA_RNA-Seq MREG-SPAG17 MREG chr2 216877956 - SPAG17 chr1 118496672 - Exonic hg19 SARC TCGA-X6-A8C2-01A 6 38 CDS-3'UTR Inter-chr q35 p12 Seq+ 44365 ChimerSeq STARFusion TCGA_RNA-Seq RANBP10-USP10 RANBP10 chr16 67805937 - USP10 chr16 84749801 + Exonic hg19 SARC TCGA-X6-A8C2-01A 5 8 Out-of-frame Intra-chr q22.1 q24.1 Seq+ 44366 ChimerSeq STARFusion TCGA_RNA-Seq KDM2B-CORO1C KDM2B chr12 121877660 - CORO1C chr12 109095099 - Exonic hg19 SARC TCGA-X6-A8C2-01A 4 5 CDS-5'UTR Intra-chr q24.31 Transcription factor q24.11 Seq+ 44367 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KA3-KDM6A RPS6KA3 chrX 20284682 - KDM6A chrX 44966655 + Exonic hg19 SARC TCGA-DX-A3UC-01A 13 60 Out-of-frame Intra-chr p22.12 p11.3 Oncogene Tumor suppressor gene Seq+ 44368 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KA3-KDM6A RPS6KA3 chrX 20285157 - KDM6A chrX 44966655 + Exonic hg19 SARC TCGA-DX-A3UC-01A 2 60 5'UTR-CDS Intra-chr p22.12 p11.3 Oncogene Tumor suppressor gene Seq+ 44369 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KA3-KDM6A RPS6KA3 chrX 20258687 - KDM6A chrX 44966655 + Exonic hg19 SARC TCGA-DX-A3UC-01A 2 60 Out-of-frame Intra-chr p22.12 p11.3 Oncogene Tumor suppressor gene Seq+ 44370 ChimerSeq STARFusion TCGA_RNA-Seq ZNF700-RAD23A ZNF700 chr19 12036088 + RAD23A chr19 13063503 + Exonic hg19 SARC TCGA-HS-A5N9-01A 180 568 In-Frame Intra-chr p13.2 Transcription factor p13.13 Seq+ 44371 ChimerSeq STARFusion TCGA_RNA-Seq ZNF763-RAD23A ZNF763 chr19 12036088 + RAD23A chr19 13063503 + Exonic hg19 SARC TCGA-HS-A5N9-01A 180 568 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.13 Seq+ 44372 ChimerSeq STARFusion TCGA_RNA-Seq ZNF763-RAD23A ZNF763 chr19 12036088 + RAD23A chr19 13063503 + Exonic hg19 SARC TCGA-HS-A5N9-01A 180 568 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.13 Seq+ 44373 ChimerSeq STARFusion TCGA_RNA-Seq KPNA6-TRAIP KPNA6 chr1 32573735 + TRAIP chr3 49885633 - Exonic hg19 SARC TCGA-HS-A5N9-01A 38 25 Out-of-frame Inter-chr p35.2 p21.31 Seq+ 44374 ChimerSeq STARFusion TCGA_RNA-Seq XPC-DAG1 XPC chr3 14219966 - DAG1 chr3 49547852 + Exonic hg19 SARC TCGA-HS-A5N9-01A 8 55 CDS-5'UTR Intra-chr p25.1 Oncogene p21.31 Seq+ 44375 ChimerSeq STARFusion TCGA_RNA-Seq CHSY3-HSPA8P4 CHSY3 chr5 129244053 + HSPA8P4 chr5 129476585 + Exonic hg19 SARC TCGA-HS-A5N9-01A 5 15 Out-of-frame Intra-chr q23.3 q23.3 44376 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A13-GTPBP10 SLC25A13 chr7 95951254 - GTPBP10 chr7 89982130 + Exonic hg19 SARC TCGA-HS-A5N9-01A 3 8 In-Frame Intra-chr q21.3 q21.13 Seq+ 44377 ChimerSeq STARFusion TCGA_RNA-Seq SVIL-KIAA1217 SVIL chr10 29975482 - KIAA1217 chr10 24508555 + Exonic hg19 SARC TCGA-HS-A5N9-01A 2 10 5'UTR-5'UTR Intra-chr p11.23 p12.2 Seq+ 44378 ChimerSeq STARFusion TCGA_RNA-Seq UBP1-SLC24A3 UBP1 chr3 33450728 - SLC24A3 chr20 19565615 + Exonic hg19 SARC TCGA-VT-A80G-01A 19 57 In-Frame Inter-chr p22.3 Transcription factor p11.23 Seq+ 44379 ChimerSeq STARFusion TCGA_RNA-Seq PPP4R1-NUP93 PPP4R1 chr18 9614224 - NUP93 chr16 56857619 + Exonic hg19 SARC TCGA-VT-A80G-01A 9 79 Out-of-frame Inter-chr p11.22 q13 Seq+ 44380 ChimerSeq STARFusion TCGA_RNA-Seq SUPT20H-POSTN SUPT20H chr13 37603902 - POSTN chr13 38138697 - Exonic hg19 SARC TCGA-VT-A80G-01A 12 34 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 44381 ChimerSeq STARFusion TCGA_RNA-Seq TMEM9B-PSIP1 TMEM9B chr11 8983639 - PSIP1 chr9 15490122 - Exonic hg19 SARC TCGA-VT-A80G-01A 7 51 In-Frame Inter-chr p15.4 p22.3 Oncogene Seq+ 44382 ChimerSeq STARFusion TCGA_RNA-Seq UBP1-SLC24A3 UBP1 chr3 33450182 - SLC24A3 chr20 19565615 + Exonic hg19 SARC TCGA-VT-A80G-01A 2 57 In-Frame Inter-chr p22.3 Transcription factor p11.23 Seq+ 44383 ChimerSeq STARFusion TCGA_RNA-Seq XXYLT1-ETV5 XXYLT1 chr3 194877178 - ETV5 chr3 185783861 - Exonic hg19 SARC TCGA-VT-A80G-01A 7 6 In-Frame Intra-chr q29 q27.2 Oncogene Transcription factor Seq+ 44384 ChimerSeq STARFusion TCGA_RNA-Seq LRAT-NAALADL2 LRAT chr4 155557548 + NAALADL2 chr3 174814580 + Exonic hg19 SARC TCGA-VT-A80G-01A 3 21 5'UTR-CDS Inter-chr q32.1 q26.31 Seq+ 44385 ChimerSeq STARFusion TCGA_RNA-Seq ATRX-SNTB2 ATRX chrX 76953071 - SNTB2 chr16 69304046 + Exonic hg19 SARC TCGA-VT-A80G-01A 5 10 Out-of-frame Inter-chr q21.1 Oncogene Seq+ 44386 ChimerSeq STARFusion TCGA_RNA-Seq NKD1-SPATC1L NKD1 chr16 50583466 + SPATC1L chr21 47588572 - Exonic hg19 SARC TCGA-X9-A973-01A 6 39 Out-of-frame Inter-chr q12.1 Seq+ 44387 ChimerSeq STARFusion TCGA_RNA-Seq PEAK1-ZBTB25 PEAK1 chr15 77712348 - ZBTB25 chr14 64916356 - Exonic hg19 SARC TCGA-X9-A973-01A 8 13 5'UTR-3'UTR Inter-chr q24.3 q23.3 Transcription factor Seq+ 44388 ChimerSeq STARFusion TCGA_RNA-Seq COL1A2-MBNL1 COL1A2 chr7 94027071 + MBNL1 chr3 151987554 + Exonic hg19 SARC TCGA-X9-A973-01A 9 1 Out-of-frame Inter-chr q21.3 q25.1 44389 ChimerSeq STARFusion TCGA_RNA-Seq ZFP3-DGCR2 ZFP3 chr17 4981870 + DGCR2 chr22 19055738 - Exonic hg19 SARC TCGA-X9-A973-01A 3 10 5'UTR-CDS Inter-chr p13.2 Transcription factor q11.21 Seq+ 44390 ChimerSeq STARFusion TCGA_RNA-Seq PELI2-FOXN3 PELI2 chr14 56585455 + FOXN3 chr14 89878834 - Exonic hg19 SARC TCGA-X9-A973-01A 3 7 CDS-5'UTR Intra-chr q22.3 q32.11 Transcription factor Seq+ 44391 ChimerSeq STARFusion TCGA_RNA-Seq CCT2-CACNG3 CCT2 chr12 69979304 + CACNG3 chr16 24372673 + Exonic hg19 SARC TCGA-DX-A7ES-01A 251 757 Out-of-frame Inter-chr q15 p12.1 Seq+ 44392 ChimerSeq STARFusion TCGA_RNA-Seq HMGA2-DAB1 HMGA2 chr12 66232349 + DAB1 chr1 57463801 - Exonic hg19 SARC TCGA-DX-A7ES-01A 171 439 CDS-3'UTR Inter-chr q14.3 Transcription factor p32.1 Seq+ 44393 ChimerSeq STARFusion TCGA_RNA-Seq ZFC3H1-ITGB6 ZFC3H1 chr12 72003960 - ITGB6 chr2 160998582 - Exonic hg19 SARC TCGA-DX-A7ES-01A 48 199 3'UTR-CDS Inter-chr q21.1 q24.2 Seq+ 44394 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-ZFC3H1 FRS2 chr12 69925836 + ZFC3H1 chr12 72005667 - Exonic hg19 SARC TCGA-DX-A7ES-01A 27 282 5'UTR-CDS Intra-chr q15 q21.1 Seq+ 44395 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-ZFC3H1 FRS2 chr12 69931763 + ZFC3H1 chr12 72005667 - Exonic hg19 SARC TCGA-DX-A7ES-01A 23 273 5'UTR-CDS Intra-chr q15 q21.1 Seq+ 44396 ChimerSeq STARFusion TCGA_RNA-Seq SPARC-COL3A1 SPARC chr5 151042300 - COL3A1 chr2 189874904 + Exonic hg19 SARC TCGA-DX-A7ES-01A 3 258 3'UTR-CDS Inter-chr q33.1 Tumor suppressor gene q32.2 Seq+ 44397 ChimerSeq STARFusion TCGA_RNA-Seq TIPRL-EFTUD1 TIPRL chr1 168148419 + EFTUD1 chr15 82456325 - Exonic hg19 SARC TCGA-DX-A7ES-01A 27 145 Out-of-frame Inter-chr q24.2 44398 ChimerSeq STARFusion TCGA_RNA-Seq DCAF6-PIGC DCAF6 chr1 167956846 + PIGC chr1 172363550 - Exonic hg19 SARC TCGA-DX-A7ES-01A 7 189 CDS-3'UTR Intra-chr q24.2 q24.3 Seq+ 44399 ChimerSeq STARFusion TCGA_RNA-Seq DCAF6-PIGC DCAF6 chr1 167956846 + PIGC chr1 172369055 - Exonic hg19 SARC TCGA-DX-A7ES-01A 4 170 CDS-3'UTR Intra-chr q24.2 q24.3 Seq+ 44400 ChimerSeq STARFusion TCGA_RNA-Seq DCAF6-PIGC DCAF6 chr1 167944253 + PIGC chr1 172363550 - Exonic hg19 SARC TCGA-DX-A7ES-01A 4 170 CDS-3'UTR Intra-chr q24.2 q24.3 Seq+ 44401 ChimerSeq STARFusion TCGA_RNA-Seq DCAF6-PIGC DCAF6 chr1 167956846 + PIGC chr1 172369056 - Exonic hg19 SARC TCGA-DX-A7ES-01A 2 170 CDS-3'UTR Intra-chr q24.2 q24.3 Seq+ 44402 ChimerSeq STARFusion TCGA_RNA-Seq DNM3-CD247 DNM3 chr1 172100428 + CD247 chr1 167410004 - Exonic hg19 SARC TCGA-DX-A7ES-01A 20 95 Out-of-frame Intra-chr q24.3 q24.2 Seq+ 44403 ChimerSeq STARFusion TCGA_RNA-Seq OSMR-DNM3 OSMR chr5 38869219 + DNM3 chr1 172050972 + Exonic hg19 SARC TCGA-DX-A7ES-01A 12 92 Out-of-frame Inter-chr p13.1 q24.3 Seq+ 44404 ChimerSeq STARFusion TCGA_RNA-Seq UHRF1BP1L-TSFM UHRF1BP1L chr12 100522358 - TSFM chr12 58189960 + Exonic hg19 SARC TCGA-DX-A7ES-01A 15 73 Out-of-frame Intra-chr q23.1 q14.1 Seq+ 44405 ChimerSeq STARFusion TCGA_RNA-Seq UHRF1BP1L-TSFM UHRF1BP1L chr12 100536370 - TSFM chr12 58189960 + Exonic hg19 SARC TCGA-DX-A7ES-01A 2 72 Out-of-frame Intra-chr q23.1 q14.1 Seq+ 44406 ChimerSeq STARFusion TCGA_RNA-Seq MPC2-DNM3 MPC2 chr1 167904971 - DNM3 chr1 172356273 + Exonic hg19 SARC TCGA-DX-A7ES-01A 10 28 Out-of-frame Intra-chr q24.2 q24.3 Seq+ 44407 ChimerSeq STARFusion TCGA_RNA-Seq MPC2-NUDT12 MPC2 chr1 167904971 - NUDT12 chr5 102895955 - Exonic hg19 SARC TCGA-DX-A7ES-01A 5 34 Out-of-frame Inter-chr q24.2 q21.2 Seq+ 44408 ChimerSeq STARFusion TCGA_RNA-Seq METTL25-CPM METTL25 chr12 82850599 + CPM chr12 69326620 - Exonic hg19 SARC TCGA-DX-A7ES-01A 7 18 Out-of-frame Intra-chr q21.31 q15 Seq+ 44409 ChimerSeq STARFusion TCGA_RNA-Seq FGGY-GOLGA2B FGGY chr1 59844509 + GOLGA2B chr12 100553746 - Exonic hg19 SARC TCGA-DX-A7ES-01A 2 35 Out-of-frame Inter-chr p32.1 44410 ChimerSeq STARFusion TCGA_RNA-Seq MPC2-NUDT12 MPC2 chr1 167904971 - NUDT12 chr5 102895951 - Exonic hg19 SARC TCGA-DX-A7ES-01A 2 34 Out-of-frame Inter-chr q24.2 q21.2 Seq+ 44411 ChimerSeq STARFusion TCGA_RNA-Seq UHRF1BP1L-CACNG3 UHRF1BP1L chr12 100536370 - CACNG3 chr16 24372673 + Exonic hg19 SARC TCGA-DX-A7ES-01A 4 25 Out-of-frame Inter-chr q23.1 p12.1 Seq+ 44412 ChimerSeq STARFusion TCGA_RNA-Seq OSMR-METTL1 OSMR chr5 38869219 + METTL1 chr12 58165040 - Exonic hg19 SARC TCGA-DX-A7ES-01A 5 14 Out-of-frame Inter-chr p13.1 q14.1 44413 ChimerSeq STARFusion TCGA_RNA-Seq MYLK-VAMP4 MYLK chr3 123512524 - VAMP4 chr1 171679954 - Exonic hg19 SARC TCGA-DX-A7ES-01A 6 9 Out-of-frame Inter-chr q21.1 q24.3 Seq+ 44414 ChimerSeq STARFusion TCGA_RNA-Seq ITGB6-CNOT2 ITGB6 chr2 160964190 - CNOT2 chr12 70731169 + Exonic hg19 SARC TCGA-DX-A7ES-01A 3 13 Out-of-frame Inter-chr q24.2 q15 Seq+ 44415 ChimerSeq STARFusion TCGA_RNA-Seq AGAP2-CNOT2 AGAP2 chr12 58125149 - CNOT2 chr12 70729218 + Exonic hg19 SARC TCGA-DX-A7ES-01A 4 8 Out-of-frame Intra-chr q14.1 q15 Seq+ 44416 ChimerSeq STARFusion TCGA_RNA-Seq TOP1-LYZ TOP1 chr20 39729993 + LYZ chr12 69743888 + Exonic hg19 SARC TCGA-DX-A7ES-01A 3 8 Out-of-frame Inter-chr q12 Oncogene q15 Seq+ 44417 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-RAB21 FRS2 chr12 69864310 + RAB21 chr12 72163580 + Exonic hg19 SARC TCGA-DX-A7ES-01A 3 7 5'UTR-CDS Intra-chr q15 q21.1 44418 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D15-CNOT2 TBC1D15 chr12 72290560 + CNOT2 chr12 70731169 + Exonic hg19 SARC TCGA-DX-A7ES-01A 3 7 Out-of-frame Intra-chr q21.1 q15 Seq+ 44419 ChimerSeq STARFusion TCGA_RNA-Seq ZEB1-SYT1 ZEB1 chr10 31608221 + SYT1 chr12 79258778 + Exonic hg19 SARC TCGA-DX-A7ES-01A 3 6 CDS-5'UTR Inter-chr p11.22 Transcription factor q21.2 Seq+ 44420 ChimerSeq STARFusion TCGA_RNA-Seq COL1A2-MMP9 COL1A2 chr7 94047860 + MMP9 chr20 44637588 + Exonic hg19 SARC TCGA-DX-A7ES-01A 3 4 Out-of-frame Inter-chr q21.3 q13.12 44421 ChimerSeq STARFusion TCGA_RNA-Seq RICTOR-LINC00639 RICTOR chr5 39074213 - LINC00639 chr14 39232249 - Exonic hg19 SARC TCGA-DX-A7ES-01A 2 5 Out-of-frame Inter-chr p13.1 q21.1 44422 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D2B-INTS4 TBC1D2B chr15 78290537 - INTS4 chr11 77594998 - Exonic hg19 SARC TCGA-3B-A9HP-01A 16 73 Out-of-frame Inter-chr q25.1 q14.1 Seq+ 44423 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D2B-INTS4 TBC1D2B chr15 78290529 - INTS4 chr11 77594998 - Exonic hg19 SARC TCGA-3B-A9HP-01A 7 68 Out-of-frame Inter-chr q25.1 q14.1 Seq+ 44424 ChimerSeq STARFusion TCGA_RNA-Seq TRAM2-THEGL TRAM2 chr6 52400581 - THEGL chr4 57414956 + Exonic hg19 SARC TCGA-3B-A9HP-01A 4 19 In-Frame Inter-chr p12.2 q12 44425 ChimerSeq STARFusion TCGA_RNA-Seq NPAT-OAF NPAT chr11 108093227 - OAF chr11 120096370 + Exonic hg19 SARC TCGA-QQ-A5VA-01A 3 104 Out-of-frame Intra-chr q22.3 q23.3 Seq+ 44426 ChimerSeq STARFusion TCGA_RNA-Seq SPATS2-TUBA1C SPATS2 chr12 49765073 + TUBA1C chr12 49602615 + Exonic hg19 SARC TCGA-QQ-A5VA-01A 7 55 5'UTR-5'UTR Intra-chr q13.12 q13.12 44427 ChimerSeq STARFusion TCGA_RNA-Seq ANLN-TMEM135 ANLN chr7 36478899 + TMEM135 chr11 86868383 + Exonic hg19 SARC TCGA-QQ-A5VA-01A 11 34 In-Frame Inter-chr p14.2 q14.2 Seq+ 44428 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB24-STK32C ZBTB24 chr6 109797378 - STK32C chr10 134059459 - Exonic hg19 SARC TCGA-QQ-A5VA-01A 9 36 In-Frame Inter-chr q21 Transcription factor q26.3 Seq+ 44429 ChimerSeq STARFusion TCGA_RNA-Seq SMPX-PDHA1 SMPX chrX 21761868 - PDHA1 chrX 19367430 + Exonic hg19 SARC TCGA-QQ-A5VA-01A 11 26 In-Frame Intra-chr p22.12 p22.12 Seq+ 44430 ChimerSeq STARFusion TCGA_RNA-Seq SPATS2-TUBA1C SPATS2 chr12 49765073 + TUBA1C chr12 49621874 + Exonic hg19 SARC TCGA-QQ-A5VA-01A 3 55 5'UTR-5'UTR Intra-chr q13.12 q13.12 44431 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF12-CEP164 ARHGEF12 chr11 120207984 + CEP164 chr11 117209282 + Exonic hg19 SARC TCGA-QQ-A5VA-01A 5 32 CDS-5'UTR Intra-chr q23.3 Tumor suppressor gene q23.3 Seq+ 44432 ChimerSeq STARFusion TCGA_RNA-Seq MAFF-OSBP2 MAFF chr22 38598219 + OSBP2 chr22 31266416 + Exonic hg19 SARC TCGA-QQ-A5VA-01A 9 16 5'UTR-CDS Intra-chr q13.1 Transcription factor q12.2 Seq+ 44433 ChimerSeq STARFusion TCGA_RNA-Seq ANO6-EDA ANO6 chr12 45797319 + EDA chrX 69080688 + Exonic hg19 SARC TCGA-QQ-A5VA-01A 3 23 Out-of-frame Inter-chr q12 q13.1 Seq+ 44434 ChimerSeq STARFusion TCGA_RNA-Seq SPECC1L-TM6SF1 SPECC1L chr22 24765288 + TM6SF1 chr15 83796110 + Exonic hg19 SARC TCGA-QQ-A5VA-01A 3 23 In-Frame Inter-chr q11.23 q25.2 Seq+ 44435 ChimerSeq STARFusion TCGA_RNA-Seq SPECC1L-TM6SF1 SPECC1L chr22 24765288 + TM6SF1 chr15 83795507 + Exonic hg19 SARC TCGA-QQ-A5VA-01A 2 23 In-Frame Inter-chr q11.23 q25.2 Seq+ 44436 ChimerSeq STARFusion TCGA_RNA-Seq SCAMP2-CHRNA9 SCAMP2 chr15 75137814 - CHRNA9 chr4 40350899 + Exonic hg19 SARC TCGA-QQ-A5VA-01A 3 16 Out-of-frame Inter-chr q24.1 p14 Seq+ 44437 ChimerSeq STARFusion TCGA_RNA-Seq ZFC3H1-TSPAN8 ZFC3H1 chr12 72013095 - TSPAN8 chr12 71676599 - Exonic hg19 SARC TCGA-QQ-A5VA-01A 2 17 CDS-5'UTR Intra-chr q21.1 q21.1 Seq+ 44438 ChimerSeq STARFusion TCGA_RNA-Seq SPIDR-ZNF771 SPIDR chr8 48626203 + ZNF771 chr16 30428876 + Exonic hg19 SARC TCGA-QQ-A5VA-01A 4 4 Out-of-frame Inter-chr q11.21 p11.2 Transcription factor 44439 ChimerSeq STARFusion TCGA_RNA-Seq SKAP2-KIAA1377 SKAP2 chr7 26883649 - KIAA1377 chr11 101814996 + Exonic hg19 SARC TCGA-QQ-A5VA-01A 2 10 Out-of-frame Inter-chr p15.2 44440 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB16-CARD18 ZBTB16 chr11 113935290 + CARD18 chr11 105009805 - Exonic hg19 SARC TCGA-QQ-A5VA-01A 3 2 Out-of-frame Intra-chr q23.2 Tumor suppressor gene Transcription factor q22.3 44441 ChimerSeq STARFusion TCGA_RNA-Seq BLMH-ABCA9 BLMH chr17 28612406 - ABCA9 chr17 66992155 - Exonic hg19 SARC TCGA-QQ-A5VA-01A 2 3 In-Frame Intra-chr q11.2 q24.2 Seq+ 44442 ChimerSeq STARFusion TCGA_RNA-Seq HEG1-SLC12A8 HEG1 chr3 124738106 - SLC12A8 chr3 124802896 - Exonic hg19 SARC TCGA-QQ-A5VA-01A 2 2 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 44443 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R37-ZNF383 PPP1R37 chr19 45596785 + ZNF383 chr19 37721311 + Exonic hg19 SARC TCGA-DX-AB2Q-01A 10 50 CDS-5'UTR Intra-chr q13.32 q13.12 Transcription factor Seq+ 44444 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R37-ZNF383 PPP1R37 chr19 45596785 + ZNF383 chr19 37715720 + Exonic hg19 SARC TCGA-DX-AB2Q-01A 2 49 CDS-5'UTR Intra-chr q13.32 q13.12 Transcription factor Seq+ 44445 ChimerSeq STARFusion TCGA_RNA-Seq ZNF223-AP2A1 ZNF223 chr19 44559344 + AP2A1 chr19 50298887 + Exonic hg19 SARC TCGA-DX-AB2Q-01A 7 19 In-Frame Intra-chr q13.31 Transcription factor q13.33 Seq+ 44446 ChimerSeq STARFusion TCGA_RNA-Seq ZNF223-AP2A1 ZNF223 chr19 44559344 + AP2A1 chr19 50298887 + Exonic hg19 SARC TCGA-DX-AB2Q-01A 7 12 In-Frame Intra-chr q13.31 Transcription factor q13.33 Seq+ 44447 ChimerSeq STARFusion TCGA_RNA-Seq ZNF383-CEBPG ZNF383 chr19 37709176 + CEBPG chr19 33870050 + Exonic hg19 SARC TCGA-DX-AB2Q-01A 2 10 5'UTR-5'UTR Intra-chr q13.12 Transcription factor q13.11 Transcription factor Seq+ 44448 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM2-TPH2 R3HDM2 chr12 57789532 - TPH2 chr12 72366299 + Exonic hg19 SARC TCGA-DX-A3U6-01A 15 62 5'UTR-CDS Intra-chr q13.3 q21.1 Seq+ 44449 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM2-TPH2 R3HDM2 chr12 57789532 - TPH2 chr12 72388219 + Exonic hg19 SARC TCGA-DX-A3U6-01A 3 62 5'UTR-CDS Intra-chr q13.3 q21.1 Seq+ 44450 ChimerSeq STARFusion TCGA_RNA-Seq DYRK2-CNTN2 DYRK2 chr12 68043725 + CNTN2 chr1 205022228 + Exonic hg19 SARC TCGA-DX-A3U6-01A 7 44 CDS-5'UTR Inter-chr q15 CMGC:DYRK q32.1 Seq+ 44451 ChimerSeq STARFusion TCGA_RNA-Seq LRP1-CAND1 LRP1 chr12 57596320 + CAND1 chr12 67686402 + Exonic hg19 SARC TCGA-DX-A3U6-01A 10 32 Out-of-frame Intra-chr q13.3 q14.3 Seq+ 44452 ChimerSeq STARFusion TCGA_RNA-Seq DNM3-TPH2 DNM3 chr1 172222822 + TPH2 chr12 72388219 + Exonic hg19 SARC TCGA-DX-A3U6-01A 7 28 In-Frame Inter-chr q24.3 q21.1 Seq+ 44453 ChimerSeq STARFusion TCGA_RNA-Seq LRP1-CAND1 LRP1 chr12 57596320 + CAND1 chr12 67688813 + Exonic hg19 SARC TCGA-DX-A3U6-01A 3 32 In-Frame Intra-chr q13.3 q14.3 Seq+ 44454 ChimerSeq STARFusion TCGA_RNA-Seq NUP107-PAAF1 NUP107 chr12 69115932 + PAAF1 chr11 73620444 + Exonic hg19 SARC TCGA-DX-A3U6-01A 3 24 Out-of-frame Inter-chr q15 q13.4 Seq+ 44455 ChimerSeq STARFusion TCGA_RNA-Seq MSRB3-ACTR5 MSRB3 chr12 65762806 + ACTR5 chr20 37400202 + Exonic hg19 SARC TCGA-DX-A3U6-01A 2 15 Out-of-frame Inter-chr q14.3 q11.23 Seq+ 44456 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D32-RPF2 TBC1D32 chr6 121624763 - RPF2 chr6 111345386 + Exonic hg19 SARC TCGA-DX-A3U6-01A 3 7 Out-of-frame Intra-chr q22.31 q21 Seq+ 44457 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-NUP107 FRS2 chr12 69864310 + NUP107 chr12 69135593 + Exonic hg19 SARC TCGA-DX-A3U6-01A 2 8 5'UTR-CDS Intra-chr q15 q15 Seq+ 44458 ChimerSeq STARFusion TCGA_RNA-Seq RPTOR-UCP3 RPTOR chr17 78831700 + UCP3 chr11 73715630 - Exonic hg19 SARC TCGA-DX-A3U6-01A 3 0 Out-of-frame Inter-chr q25.3 q13.4 44459 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM2-MAMDC2 R3HDM2 chr12 57789532 - MAMDC2 chr9 72833253 + Exonic hg19 SARC TCGA-DX-A3U6-01A 2 3 5'UTR-CDS Inter-chr q13.3 q21.12 Seq+ 44460 ChimerSeq STARFusion TCGA_RNA-Seq CHSY3-RBM22 CHSY3 chr5 129244053 + RBM22 chr5 150078193 - Exonic hg19 SARC TCGA-KD-A5QS-01A 10 67 In-Frame Intra-chr q23.3 q33.1 Seq+ 44461 ChimerSeq STARFusion TCGA_RNA-Seq CHSY3-RBM22 CHSY3 chr5 129244053 + RBM22 chr5 150078833 - Exonic hg19 SARC TCGA-KD-A5QS-01A 7 67 In-Frame Intra-chr q23.3 q33.1 Seq+ 44462 ChimerSeq STARFusion TCGA_RNA-Seq STRN-HEATR5B STRN chr2 37193373 - HEATR5B chr2 37216002 - Exonic hg19 SARC TCGA-KD-A5QS-01A 5 19 In-Frame Intra-chr p22.2 p22.2 Seq+ 44463 ChimerSeq STARFusion TCGA_RNA-Seq FAM118A-VAPB FAM118A chr22 45706064 + VAPB chr20 57009658 + Exonic hg19 SARC TCGA-KD-A5QS-01A 2 25 5'UTR-CDS Inter-chr q13.31 q13.32 Seq+ 44464 ChimerSeq STARFusion TCGA_RNA-Seq HMGB1P10-CCNA1 HMGB1P10 chr22 26956960 + CCNA1 chr13 37011764 + Exonic hg19 SARC TCGA-KD-A5QS-01A 3 16 Out-of-frame Inter-chr q12.1 q13.3 Seq+ 44465 ChimerSeq STARFusion TCGA_RNA-Seq RFX7-NEDD4 RFX7 chr15 56471468 - NEDD4 chr15 56132925 - Exonic hg19 SARC TCGA-KD-A5QS-01A 2 6 Out-of-frame Intra-chr q21.3 Transcription factor q21.3 Tumor suppressor gene 44466 ChimerSeq STARFusion TCGA_RNA-Seq AMOTL1-PIWIL4 AMOTL1 chr11 94501726 + PIWIL4 chr11 94340605 + Exonic hg19 SARC TCGA-KD-A5QS-01A 2 4 Out-of-frame Intra-chr q21 q21 Seq+ 44467 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1033-PRDM4 KIAA1033 chr12 105514982 + PRDM4 chr12 108147886 - Exonic hg19 SARC TCGA-KD-A5QS-01A 2 3 Out-of-frame Intra-chr q23.3 Tumor suppressor gene Transcription factor Seq+ 44468 ChimerSeq STARFusion TCGA_RNA-Seq CHSY3-SKP1 CHSY3 chr5 129244053 + SKP1 chr5 133509713 - Exonic hg19 SARC TCGA-KD-A5QS-01A 2 1 CDS-5'UTR Intra-chr q23.3 q31.1 44469 ChimerSeq STARFusion TCGA_RNA-Seq SH3GL1-ZIC1 SH3GL1 chr19 4400321 - ZIC1 chr3 147130305 + Exonic hg19 SARC TCGA-KD-A5QS-01A 2 1 Out-of-frame Inter-chr p13.3 q24 Tumor suppressor gene Transcription factor Seq+ 44470 ChimerSeq STARFusion TCGA_RNA-Seq NAP1L1-OSTF1 NAP1L1 chr12 76467983 - OSTF1 chr9 77752454 + Exonic hg19 SARC TCGA-WK-A8Y0-01A 131 985 Out-of-frame Inter-chr q21.2 q21.13 Seq+ 44471 ChimerSeq STARFusion TCGA_RNA-Seq NAP1L1-OSTF1 NAP1L1 chr12 76478347 - OSTF1 chr9 77752454 + Exonic hg19 SARC TCGA-WK-A8Y0-01A 38 929 5'UTR-CDS Inter-chr q21.2 q21.13 Seq+ 44472 ChimerSeq STARFusion TCGA_RNA-Seq PCSK5-RAB3IP PCSK5 chr9 78506289 + RAB3IP chr12 70178500 + Exonic hg19 SARC TCGA-WK-A8Y0-01A 81 198 In-Frame Inter-chr q21.13 q15 Seq+ 44473 ChimerSeq STARFusion TCGA_RNA-Seq LEMD3-LYZ LEMD3 chr12 65564898 + LYZ chr12 69743888 + Exonic hg19 SARC TCGA-WK-A8Y0-01A 63 105 In-Frame Intra-chr q14.3 q15 Seq+ 44474 ChimerSeq STARFusion TCGA_RNA-Seq PCSK5-RAB3IP PCSK5 chr9 78506289 + RAB3IP chr12 70188217 + Exonic hg19 SARC TCGA-WK-A8Y0-01A 13 194 In-Frame Inter-chr q21.13 q15 Seq+ 44475 ChimerSeq STARFusion TCGA_RNA-Seq COPZ1-ITGA7 COPZ1 chr12 54718965 + ITGA7 chr12 56105918 - Exonic hg19 SARC TCGA-WK-A8Y0-01A 9 1 Out-of-frame Intra-chr q13.13 q13.2 Tumor suppressor gene Seq+ 44476 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC6-WIF1 ZCCHC6 chr9 88940249 - WIF1 chr12 65456356 - Exonic hg19 SARC TCGA-WK-A8Y0-01A 5 6 In-Frame Inter-chr q21.33 q14.3 Tumor suppressor gene Seq+ 44477 ChimerSeq STARFusion TCGA_RNA-Seq ARID2-PTPRB ARID2 chr12 46125097 + PTPRB chr12 70933802 - Exonic hg19 SARC TCGA-WK-A8Y0-01A 2 17 In-Frame Intra-chr q12 Oncogene Tumor suppressor gene Transcription factor q15 Seq+ 44478 ChimerSeq STARFusion TCGA_RNA-Seq ZNF562-SARNP ZNF562 chr19 9785691 - SARNP chr12 56146624 - Exonic hg19 SARC TCGA-WK-A8Y0-01A 2 16 5'UTR-3'UTR Inter-chr p13.2 Transcription factor q13.2 Seq+ 44479 ChimerSeq STARFusion TCGA_RNA-Seq RBM3-COL1A1 RBM3 chrX 48434090 + COL1A1 chr17 48264909 - Exonic hg19 SARC TCGA-WK-A8Y0-01A 5 1 Out-of-frame Inter-chr p11.23 q21.33 Oncogene 44480 ChimerSeq STARFusion TCGA_RNA-Seq NFIX-ANHX NFIX chr19 13136366 + ANHX chr12 133810964 - Exonic hg19 SARC TCGA-DX-AB2L-01A 2 3 Out-of-frame Inter-chr p13.13 Transcription factor q24.33 Transcription factor Seq+ 44481 ChimerSeq STARFusion TCGA_RNA-Seq SLC16A7-NUP107 SLC16A7 chr12 59990017 + NUP107 chr12 69127232 + Exonic hg19 SARC TCGA-3B-A9HU-01A 63 359 5'UTR-CDS Intra-chr q14.1 q15 Seq+ 44482 ChimerSeq STARFusion TCGA_RNA-Seq NHSL1-CDIP1 NHSL1 chr6 138866760 - CDIP1 chr16 4564665 - Exonic hg19 SARC TCGA-3B-A9HU-01A 44 209 Out-of-frame Inter-chr q24.1 p13.3 Seq+ 44483 ChimerSeq STARFusion TCGA_RNA-Seq SLFN5-TBC1D15 SLFN5 chr17 33570162 + TBC1D15 chr12 72307606 + Exonic hg19 SARC TCGA-3B-A9HU-01A 42 142 5'UTR-5'UTR Inter-chr q12 q21.1 Seq+ 44484 ChimerSeq STARFusion TCGA_RNA-Seq HMBOX1-BNIP3L HMBOX1 chr8 28876430 + BNIP3L chr8 26362823 + Exonic hg19 SARC TCGA-3B-A9HU-01A 27 137 CDS-3'UTR Intra-chr p21.1 Transcription factor p21.2 Tumor suppressor gene Seq+ 44485 ChimerSeq STARFusion TCGA_RNA-Seq ZFC3H1-MON2 ZFC3H1 chr12 72050665 - MON2 chr12 62972225 + Exonic hg19 SARC TCGA-3B-A9HU-01A 23 113 Out-of-frame Intra-chr q21.1 q14.1 Seq+ 44486 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D15-SLC16A7 TBC1D15 chr12 72266783 + SLC16A7 chr12 60165000 + Exonic hg19 SARC TCGA-3B-A9HU-01A 11 70 Out-of-frame Intra-chr q21.1 q14.1 Seq+ 44487 ChimerSeq STARFusion TCGA_RNA-Seq LGR5-TSPAN8 LGR5 chr12 71834072 + TSPAN8 chr12 71676599 - Exonic hg19 SARC TCGA-3B-A9HU-01A 6 63 CDS-5'UTR Intra-chr q21.1 q21.1 Seq+ 44488 ChimerSeq STARFusion TCGA_RNA-Seq C1orf21-INTS7 C1orf21 chr1 184567595 + INTS7 chr1 212126043 - Exonic hg19 SARC TCGA-3B-A9HU-01A 11 42 Out-of-frame Intra-chr q25.3 q32.3 Seq+ 44489 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1614-F11R KIAA1614 chr1 180897709 + F11R chr1 160970138 - Exonic hg19 SARC TCGA-3B-A9HU-01A 9 29 Out-of-frame Intra-chr q25.3 q23.3 Seq+ 44490 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1614-F11R KIAA1614 chr1 180897709 + F11R chr1 160970138 - Exonic hg19 SARC TCGA-3B-A9HU-01A 9 29 Out-of-frame Intra-chr q25.3 q23.3 Seq+ 44491 ChimerSeq STARFusion TCGA_RNA-Seq MARS-MSRB3 MARS chr12 57898082 + MSRB3 chr12 65881784 + Exonic hg19 SARC TCGA-3B-A9HU-01A 6 40 CDS-3'UTR Intra-chr q13.3 q14.3 Seq+ 44492 ChimerSeq STARFusion TCGA_RNA-Seq MON2-TBC1D15 MON2 chr12 62960230 + TBC1D15 chr12 72265850 + Exonic hg19 SARC TCGA-3B-A9HU-01A 5 44 In-Frame Intra-chr q14.1 q21.1 Seq+ 44493 ChimerSeq STARFusion TCGA_RNA-Seq REV3L-TRAF3IP2 REV3L chr6 111803953 - TRAF3IP2 chr6 111897024 - Exonic hg19 SARC TCGA-3B-A9HU-01A 4 48 Out-of-frame Intra-chr q21 q21 Seq+ 44494 ChimerSeq STARFusion TCGA_RNA-Seq CPM-MON2 CPM chr12 69326458 - MON2 chr12 62926218 + Exonic hg19 SARC TCGA-3B-A9HU-01A 5 40 Out-of-frame Intra-chr q15 q14.1 Seq+ 44495 ChimerSeq STARFusion TCGA_RNA-Seq ATP9B-LUC7L ATP9B chr18 76953263 + LUC7L chr16 258187 - Exonic hg19 SARC TCGA-3B-A9HU-01A 5 36 In-Frame Inter-chr p13.3 Seq+ 44496 ChimerSeq STARFusion TCGA_RNA-Seq REV3L-TRAF3IP2 REV3L chr6 111793216 - TRAF3IP2 chr6 111897024 - Exonic hg19 SARC TCGA-3B-A9HU-01A 2 48 CDS-3'UTR Intra-chr q21 q21 Seq+ 44497 ChimerSeq STARFusion TCGA_RNA-Seq RAB21-FRS2 RAB21 chr12 72167802 + FRS2 chr12 69955960 + Exonic hg19 SARC TCGA-3B-A9HU-01A 4 30 CDS-5'UTR Intra-chr q21.1 q15 Seq+ 44498 ChimerSeq STARFusion TCGA_RNA-Seq DIAPH2-RAB3IP DIAPH2 chrX 95940189 + RAB3IP chr12 70149164 + Exonic hg19 SARC TCGA-3B-A9HU-01A 4 25 Out-of-frame Inter-chr q21.33 q15 Seq+ 44499 ChimerSeq STARFusion TCGA_RNA-Seq HMGA2-ARFGAP2 HMGA2 chr12 66219161 + ARFGAP2 chr11 47193884 - Exonic hg19 SARC TCGA-3B-A9HU-01A 3 28 Out-of-frame Inter-chr q14.3 Transcription factor p11.2 Seq+ 44500 ChimerSeq STARFusion TCGA_RNA-Seq ANKH-DNAH5 ANKH chr5 14871461 - DNAH5 chr5 13737604 - Exonic hg19 SARC TCGA-3B-A9HU-01A 5 19 In-Frame Intra-chr p15.2 p15.2 Seq+ 44501 ChimerSeq STARFusion TCGA_RNA-Seq ATP9B-ATRX ATP9B chr18 76856649 + ATRX chrX 76909690 - Exonic hg19 SARC TCGA-3B-A9HU-01A 4 20 In-Frame Inter-chr q21.1 Oncogene Seq+ 44502 ChimerSeq STARFusion TCGA_RNA-Seq HMGA2-ARFGAP2 HMGA2 chr12 66219161 + ARFGAP2 chr11 47193351 - Exonic hg19 SARC TCGA-3B-A9HU-01A 2 28 In-Frame Inter-chr q14.3 Transcription factor p11.2 Seq+ 44503 ChimerSeq STARFusion TCGA_RNA-Seq NFIC-IL4I1 NFIC chr19 3382241 + IL4I1 chr19 50394364 - Exonic hg19 SARC TCGA-3B-A9HU-01A 3 19 Out-of-frame Intra-chr p13.3 Transcription factor q13.33 Seq+ 44504 ChimerSeq STARFusion TCGA_RNA-Seq ANKH-DNAH5 ANKH chr5 14871461 - DNAH5 chr5 13736041 - Exonic hg19 SARC TCGA-3B-A9HU-01A 2 17 Out-of-frame Intra-chr p15.2 p15.2 Seq+ 44505 ChimerSeq STARFusion TCGA_RNA-Seq HMGA2-RHBG HMGA2 chr12 66221867 + RHBG chr1 156340976 + Exonic hg19 SARC TCGA-3B-A9HU-01A 6 0 In-Frame Inter-chr q14.3 Transcription factor q22 Seq+ 44506 ChimerSeq STARFusion TCGA_RNA-Seq XPR1-TNR XPR1 chr1 180601406 + TNR chr1 175497505 - Exonic hg19 SARC TCGA-3B-A9HU-01A 3 9 CDS-5'UTR Intra-chr q25.3 q25.1 Seq+ 44507 ChimerSeq STARFusion TCGA_RNA-Seq EML1-BASP1 EML1 chr14 100317372 + BASP1 chr5 17275317 + Exonic hg19 SARC TCGA-3B-A9HU-01A 2 11 CDS-5'UTR Inter-chr q32.2 p15.1 Tumor suppressor gene Seq+ 44508 ChimerSeq STARFusion TCGA_RNA-Seq RBFA-MRPS35 RBFA chr18 77796710 + MRPS35 chr12 27890472 + Exonic hg19 SARC TCGA-3B-A9HU-01A 4 2 In-Frame Inter-chr q23 p11.22 Seq+ 44509 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2B-GRM8 GATAD2B chr1 153895209 - GRM8 chr7 126086426 - Exonic hg19 SARC TCGA-DX-A8BJ-01A 86 331 5'UTR-CDS Inter-chr Transcription factor q31.33 Oncogene Seq+ 44510 ChimerSeq STARFusion TCGA_RNA-Seq TGFBR2-XPC TGFBR2 chr3 30648469 + XPC chr3 14214562 - Exonic hg19 SARC TCGA-DX-A8BJ-01A 38 103 In-Frame Intra-chr p24.1 Oncogene Tumor suppressor gene p25.1 Oncogene Seq+ 44511 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF11-CD48 ARHGEF11 chr1 157014091 - CD48 chr1 160654979 - Exonic hg19 SARC TCGA-DX-A8BJ-01A 14 72 Out-of-frame Intra-chr q23.1 q23.3 Seq+ 44512 ChimerSeq STARFusion TCGA_RNA-Seq INPP4A-EEF1E1 INPP4A chr2 99193606 + EEF1E1 chr6 8080263 - Exonic hg19 SARC TCGA-DX-A8BJ-01A 10 27 Out-of-frame Inter-chr q11.2 p24.3 Tumor suppressor gene Seq+ 44513 ChimerSeq STARFusion TCGA_RNA-Seq PEX11B-PDZK1 PEX11B chr1 145516456 + PDZK1 chr1 145752428 + Exonic hg19 SARC TCGA-DX-A8BJ-01A 4 35 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 44514 ChimerSeq STARFusion TCGA_RNA-Seq SLC38A10-TMEM207 SLC38A10 chr17 79244718 - TMEM207 chr3 190147520 - Exonic hg19 SARC TCGA-DX-A8BJ-01A 3 31 Out-of-frame Inter-chr q25.3 q28 Seq+ 44515 ChimerSeq STARFusion TCGA_RNA-Seq BTD-BCAS3 BTD chr3 15686438 + BCAS3 chr17 59445688 + Exonic hg19 SARC TCGA-DX-A8BJ-01A 3 15 Out-of-frame Inter-chr p25.1 q23.2 Seq+ 44516 ChimerSeq STARFusion TCGA_RNA-Seq MKLN1-DNM3 MKLN1 chr7 131012756 + DNM3 chr1 171956796 + Exonic hg19 SARC TCGA-DX-A8BJ-01A 2 16 Out-of-frame Inter-chr q32.3 q24.3 Seq+ 44517 ChimerSeq STARFusion TCGA_RNA-Seq TBX19-PCP4L1 TBX19 chr1 168278115 + PCP4L1 chr1 161253458 + Exonic hg19 SARC TCGA-DX-A8BJ-01A 3 11 Out-of-frame Intra-chr q24.2 Transcription factor q23.3 Seq+ 44518 ChimerSeq STARFusion TCGA_RNA-Seq HP1BP3-ZMYM4 HP1BP3 chr1 21103090 - ZMYM4 chr1 35824526 + Exonic hg19 SARC TCGA-DX-A8BJ-01A 2 13 Out-of-frame Intra-chr p36.12 p34.3 Seq+ 44519 ChimerSeq STARFusion TCGA_RNA-Seq LPCAT1-MED13 LPCAT1 chr5 1501576 - MED13 chr17 60024378 - Exonic hg19 SARC TCGA-DX-A8BJ-01A 2 13 Out-of-frame Inter-chr q23.2 Seq+ 44520 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2NL-METTL18 NOTCH2NL chr1 145209436 + METTL18 chr1 169763038 - Exonic hg19 SARC TCGA-DX-A8BJ-01A 2 5 5'UTR-5'UTR Intra-chr q21.1 q24.2 44521 ChimerSeq STARFusion TCGA_RNA-Seq WDR1-SLC2A9 WDR1 chr4 10078928 - SLC2A9 chr4 9836632 - Exonic hg19 SARC TCGA-K1-A6RV-01A 93 476 In-Frame Intra-chr p16.1 p16.1 Seq+ 44522 ChimerSeq STARFusion TCGA_RNA-Seq GALNT13-SMYD1 GALNT13 chr2 154997018 + SMYD1 chr2 88383835 + Exonic hg19 SARC TCGA-K1-A6RV-01A 15 44 In-Frame Intra-chr q23.3 p11.2 Seq+ 44523 ChimerSeq STARFusion TCGA_RNA-Seq PDCD11-FBXL15 PDCD11 chr10 105166547 + FBXL15 chr10 104180809 + Exonic hg19 SARC TCGA-K1-A6RV-01A 13 41 CDS-5'UTR Intra-chr q24.33 q24.32 Seq+ 44524 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT9-COPS4 AGPAT9 chr4 84465755 + COPS4 chr4 83987591 + Exonic hg19 SARC TCGA-K1-A6RV-01A 10 46 In-Frame Intra-chr q21.22 Seq+ 44525 ChimerSeq STARFusion TCGA_RNA-Seq NPAS2-EXT2 NPAS2 chr2 101436876 + EXT2 chr11 44253903 + Exonic hg19 SARC TCGA-K1-A6RV-01A 10 12 5'UTR-CDS Inter-chr q11.2 Tumor suppressor gene Transcription factor p11.2 Oncogene Tumor suppressor gene Seq+ 44526 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-MTL5 ZBTB20 chr3 114219199 - MTL5 chr11 68475968 - Exonic hg19 SARC TCGA-K1-A6RV-01A 3 26 5'UTR-CDS Inter-chr q13.31 Transcription factor Seq+ 44527 ChimerSeq STARFusion TCGA_RNA-Seq NTM-SORL1 NTM chr11 131781542 + SORL1 chr11 121475822 + Exonic hg19 SARC TCGA-K1-A6RV-01A 2 25 Out-of-frame Intra-chr q25 q24.1 Seq+ 44528 ChimerSeq STARFusion TCGA_RNA-Seq DIP2C-ORC4 DIP2C chr10 735434 - ORC4 chr2 148733544 - Exonic hg19 SARC TCGA-K1-A6RV-01A 4 9 CDS-5'UTR Inter-chr p15.3 q23.1 Seq+ 44529 ChimerSeq STARFusion TCGA_RNA-Seq LTN1-RPL39P40 LTN1 chr21 30354638 - RPL39P40 chr21 18873122 - Exonic hg19 SARC TCGA-K1-A6RV-01A 4 5 Out-of-frame Intra-chr q21.3 q21.1 Seq+ 44530 ChimerSeq STARFusion TCGA_RNA-Seq APP-FDPSP6 APP chr21 27423316 - FDPSP6 chr21 21760949 + Exonic hg19 SARC TCGA-K1-A6RV-01A 3 1 Out-of-frame Intra-chr q21.3 q21.1 44531 ChimerSeq STARFusion TCGA_RNA-Seq SMARCB1-SBF2 SMARCB1 chr22 24167602 + SBF2 chr11 10215534 - Exonic hg19 SARC TCGA-K1-A6RV-01A 2 2 Out-of-frame Inter-chr q11.23 Oncogene Tumor suppressor gene p15.4 44532 ChimerSeq STARFusion TCGA_RNA-Seq CSGALNACT1-ZMAT4 CSGALNACT1 chr8 19614697 - ZMAT4 chr8 40625249 - Exonic hg19 SARC TCGA-K1-A6RV-01A 2 1 5'UTR-CDS Intra-chr p21.3 p11.21 Transcription factor 44533 ChimerSeq STARFusion TCGA_RNA-Seq PHF7-CHMP1A PHF7 chr3 52448603 + CHMP1A chr16 89713739 - Exonic hg19 SARC TCGA-K1-A6RV-01A 2 0 In-Frame Inter-chr p21.1 q24.3 44534 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA1-CAP1P2 PLEKHA1 chr10 124172563 + CAP1P2 chr10 44101147 - Exonic hg19 SARC TCGA-3B-A9HJ-01A 15 56 Out-of-frame Intra-chr q26.13 q11.21 Seq+ 44535 ChimerSeq STARFusion TCGA_RNA-Seq PDZD8-CACUL1 PDZD8 chr10 119078383 - CACUL1 chr10 120433972 - Exonic hg19 SARC TCGA-3B-A9HJ-01A 14 28 Out-of-frame Intra-chr q26.11 q26.11 Seq+ 44536 ChimerSeq STARFusion TCGA_RNA-Seq CTDP1-NFATC1 CTDP1 chr18 77475528 + NFATC1 chr18 77287528 + Exonic hg19 SARC TCGA-3B-A9HJ-01A 4 30 In-Frame Intra-chr q23 Transcription factor Seq+ 44537 ChimerSeq STARFusion TCGA_RNA-Seq VPS45-PSMB4 VPS45 chr1 150044293 + PSMB4 chr1 151374293 + Exonic hg19 SARC TCGA-K1-A6RT-01A 4 19 Out-of-frame Intra-chr q21.2 q21.3 Seq+ 44538 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-ATP6V0D2 PPP6R3 chr11 68228295 + ATP6V0D2 chr8 87111133 + Exonic hg19 SARC TCGA-K1-A6RT-01A 2 9 5'UTR-5'UTR Inter-chr q13.2 q21.3 Seq+ 44539 ChimerSeq STARFusion TCGA_RNA-Seq MAPK1-YPEL1 MAPK1 chr22 22221612 - YPEL1 chr22 22065197 - Exonic hg19 SARC TCGA-K1-A6RT-01A 2 6 CDS-5'UTR Intra-chr q11.22 Oncogene q11.22 Seq+ 44540 ChimerSeq STARFusion TCGA_RNA-Seq RALGPS1-NUP210L RALGPS1 chr9 129677291 + NUP210L chr1 153967656 - Exonic hg19 SARC TCGA-K1-A6RT-01A 2 6 5'UTR-CDS Inter-chr q33.3 q21.3 Seq+ 44541 ChimerSeq STARFusion TCGA_RNA-Seq TPM2-MYH9 TPM2 chr9 35689701 - MYH9 chr22 36696223 - Exonic hg19 SARC TCGA-K1-A6RT-01A 3 2 In-Frame Inter-chr p13.3 q12.3 Oncogene Tumor suppressor gene 44542 ChimerSeq STARFusion TCGA_RNA-Seq RBM25-ACOT6 RBM25 chr14 73550259 + ACOT6 chr14 74083694 + Exonic hg19 SARC TCGA-DX-AB32-01A 15 97 CDS-5'UTR Intra-chr q24.2 q24.3 Seq+ 44543 ChimerSeq STARFusion TCGA_RNA-Seq STXBP6-ZNF410 STXBP6 chr14 25443871 - ZNF410 chr14 74370663 + Exonic hg19 SARC TCGA-DX-AB32-01A 17 38 In-Frame Intra-chr q12 q24.3 Transcription factor Seq+ 44544 ChimerSeq STARFusion TCGA_RNA-Seq GPR89A-PDZK1P1 GPR89A chr1 145826888 - PDZK1P1 chr1 145932040 - Exonic hg19 SARC TCGA-DX-AB32-01A 5 43 3'UTR-3'UTR Intra-chr q21.1 q21.2 44545 ChimerSeq STARFusion TCGA_RNA-Seq STXBP6-ZNF410 STXBP6 chr14 25443871 - ZNF410 chr14 74371605 + Exonic hg19 SARC TCGA-DX-AB32-01A 2 38 Out-of-frame Intra-chr q12 q24.3 Transcription factor Seq+ 44546 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC4-SMIM20 ZCCHC4 chr4 25317022 + SMIM20 chr4 25929935 + Exonic hg19 SARC TCGA-DX-AB32-01A 8 14 Out-of-frame Intra-chr p15.2 p15.2 Seq+ 44547 ChimerSeq STARFusion TCGA_RNA-Seq KLF12-CAMK2G KLF12 chr13 74518118 - CAMK2G chr10 75577312 - Exonic hg19 SARC TCGA-X6-A7WB-01A 15 32 Out-of-frame Inter-chr q22.1 Transcription factor q22.2 Seq+ 44548 ChimerSeq STARFusion TCGA_RNA-Seq WDFY2-MST4 WDFY2 chr13 52158960 + MST4 chrX 131188659 + Exonic hg19 SARC TCGA-X6-A7WB-01A 5 33 Out-of-frame Inter-chr q14.3 STE:STE20 44549 ChimerSeq STARFusion TCGA_RNA-Seq GLTSCR1L-TMEM217 GLTSCR1L chr6 42749839 + TMEM217 chr6 37186817 - Exonic hg19 SARC TCGA-X6-A7WB-01A 8 6 Out-of-frame Intra-chr p21.2 Seq+ 44550 ChimerSeq STARFusion TCGA_RNA-Seq PPARD-SLC22A7 PPARD chr6 35378994 + SLC22A7 chr6 43267636 + Exonic hg19 SARC TCGA-X6-A7WB-01A 3 16 In-Frame Intra-chr p21.31 Transcription factor p21.1 Seq+ 44551 ChimerSeq STARFusion TCGA_RNA-Seq PROKR2-CYP4F30P PROKR2 chr20 5294558 - CYP4F30P chr2 131447726 + Exonic hg19 SARC TCGA-X6-A7WB-01A 2 7 CDS-3'UTR Inter-chr p12.3 q21.1 44552 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC17-NCR2 ZDHHC17 chr12 77158109 + NCR2 chr6 41303569 + Exonic hg19 SARC TCGA-DX-A6BF-01A 49 249 CDS-5'UTR Inter-chr q21.2 p21.1 Seq+ 44553 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC17-NCR2 ZDHHC17 chr12 77158109 + NCR2 chr6 41303825 + Exonic hg19 SARC TCGA-DX-A6BF-01A 9 246 Out-of-frame Inter-chr q21.2 p21.1 Seq+ 44554 ChimerSeq STARFusion TCGA_RNA-Seq ZNF318-CD2AP ZNF318 chr6 43336705 - CD2AP chr6 47548600 + Exonic hg19 SARC TCGA-DX-A6BF-01A 40 113 In-Frame Intra-chr p21.1 Transcription factor p12.3 Seq+ 44555 ChimerSeq STARFusion TCGA_RNA-Seq IGJ-IGKC IGJ chr4 71522111 - IGKC chr2 89157101 - Exonic hg19 SARC TCGA-DX-A6BF-01A 3 29 Out-of-frame Inter-chr p11.2 44556 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 SARC TCGA-DX-A6BF-01A 8 0 Out-of-frame Inter-chr q13.33 p21.1 44557 ChimerSeq STARFusion TCGA_RNA-Seq GIT1-IGKC GIT1 chr17 27901368 - IGKC chr2 89161074 - Exonic hg19 SARC TCGA-DX-A6BF-01A 7 1 Out-of-frame Inter-chr q11.2 p11.2 44558 ChimerSeq STARFusion TCGA_RNA-Seq ATAD1-C10orf11 ATAD1 chr10 89544227 - C10orf11 chr10 78316967 + Exonic hg19 SARC TCGA-DX-AB2J-01A 10 70 In-Frame Intra-chr Seq+ 44559 ChimerSeq STARFusion TCGA_RNA-Seq ZNF224-CYP2S1 ZNF224 chr19 44602041 + CYP2S1 chr19 41711863 + Exonic hg19 SARC TCGA-DX-AB2J-01A 11 55 In-Frame Intra-chr q13.31 Transcription factor q13.2 Seq+ 44560 ChimerSeq STARFusion TCGA_RNA-Seq SAE1-HAS1 SAE1 chr19 47634285 + HAS1 chr19 52223148 - Exonic hg19 SARC TCGA-DX-AB2J-01A 10 53 Out-of-frame Intra-chr q13.32 q13.41 Seq+ 44561 ChimerSeq STARFusion TCGA_RNA-Seq SAE1-HAS1 SAE1 chr19 47634369 + HAS1 chr19 52223151 - Exonic hg19 SARC TCGA-DX-AB2J-01A 2 53 5'UTR-CDS Intra-chr q13.32 q13.41 Seq+ 44562 ChimerSeq STARFusion TCGA_RNA-Seq SAE1-HAS1 SAE1 chr19 47634369 + HAS1 chr19 52223148 - Exonic hg19 SARC TCGA-DX-AB2J-01A 2 53 5'UTR-CDS Intra-chr q13.32 q13.41 Seq+ 44563 ChimerSeq STARFusion TCGA_RNA-Seq TEAD3-ZFAND3 TEAD3 chr6 35464675 - ZFAND3 chr6 38084348 + Exonic hg19 SARC TCGA-DX-AB2J-01A 9 24 5'UTR-CDS Intra-chr p21.31 Transcription factor p21.2 Seq+ 44564 ChimerSeq STARFusion TCGA_RNA-Seq NFKB1-BANK1 NFKB1 chr4 103516138 + BANK1 chr4 102984232 + Exonic hg19 SARC TCGA-DX-AB2J-01A 5 18 Out-of-frame Intra-chr q24 Oncogene Tumor suppressor gene Transcription factor q24 Seq+ 44565 ChimerSeq STARFusion TCGA_RNA-Seq GMDS-EXOC2 GMDS chr6 1726650 - EXOC2 chr6 556564 - Exonic hg19 SARC TCGA-DX-AB2J-01A 5 15 In-Frame Intra-chr p25.3 p25.3 Seq+ 44566 ChimerSeq STARFusion TCGA_RNA-Seq TGFBRAP1-DPP10 TGFBRAP1 chr2 105912813 - DPP10 chr2 116066815 + Exonic hg19 SARC TCGA-DX-AB2J-01A 3 12 In-Frame Intra-chr q12.2 q14.1 Seq+ 44567 ChimerSeq STARFusion TCGA_RNA-Seq TGFBRAP1-DPP10 TGFBRAP1 chr2 105912813 - DPP10 chr2 115464694 + Exonic hg19 SARC TCGA-DX-AB2J-01A 3 12 CDS-5'UTR Intra-chr q12.2 q14.1 Seq+ 44568 ChimerSeq STARFusion TCGA_RNA-Seq AFF1-GPRIN3 AFF1 chr4 87928576 + GPRIN3 chr4 90171384 - Exonic hg19 SARC TCGA-DX-AB2J-01A 2 14 CDS-5'UTR Intra-chr q21.3 Oncogene q22.1 Seq+ 44569 ChimerSeq STARFusion TCGA_RNA-Seq LSM14A-ZNF221 LSM14A chr19 34687668 + ZNF221 chr19 44466877 + Exonic hg19 SARC TCGA-DX-AB2J-01A 2 14 CDS-5'UTR Intra-chr q13.31 Transcription factor Seq+ 44570 ChimerSeq STARFusion TCGA_RNA-Seq KIF13A-UBE2K KIF13A chr6 17987285 - UBE2K chr4 39776454 + Exonic hg19 SARC TCGA-DX-AB2J-01A 3 8 In-Frame Inter-chr p22.3 p14 Seq+ 44571 ChimerSeq STARFusion TCGA_RNA-Seq LDLRAD3-DEPDC7 LDLRAD3 chr11 36120011 + DEPDC7 chr11 33054808 + Exonic hg19 SARC TCGA-DX-AB2J-01A 2 12 In-Frame Intra-chr p13 p13 Seq+ 44572 ChimerSeq STARFusion TCGA_RNA-Seq AUTS2-ACTR1A AUTS2 chr7 69364484 + ACTR1A chr10 104250370 - Exonic hg19 SARC TCGA-LI-A67I-01A 4 14 In-Frame Inter-chr q11.22 q24.32 Seq+ 44573 ChimerSeq STARFusion TCGA_RNA-Seq COL4A2-LINC01054 COL4A2 chr13 111102801 + LINC01054 chr13 115096253 - Exonic hg19 SARC TCGA-LI-A67I-01A 2 15 Out-of-frame Intra-chr q34 q34 44574 ChimerSeq STARFusion TCGA_RNA-Seq EIF4EBP1-ADAM18 EIF4EBP1 chr8 37888236 + ADAM18 chr8 39564309 + Exonic hg19 SARC TCGA-LI-A67I-01A 2 6 Out-of-frame Intra-chr p11.23 Seq+ 44575 ChimerSeq STARFusion TCGA_RNA-Seq PTPN11-EPYC PTPN11 chr12 112893867 + EPYC chr12 91372039 - Exonic hg19 SARC TCGA-DX-A1KW-01A 518 1140 In-Frame Intra-chr q24.13 Oncogene Tumor suppressor gene q21.33 Seq+ 44576 ChimerSeq STARFusion TCGA_RNA-Seq PWP1-CCDC63 PWP1 chr12 108098524 + CCDC63 chr12 111330880 + Exonic hg19 SARC TCGA-DX-A1KW-01A 228 546 In-Frame Intra-chr q23.3 q24.11 Seq+ 44577 ChimerSeq STARFusion TCGA_RNA-Seq GNS-NUP107 GNS chr12 65130784 - NUP107 chr12 69103018 + Exonic hg19 SARC TCGA-DX-A1KW-01A 97 337 In-Frame Intra-chr q14.3 q15 Seq+ 44578 ChimerSeq STARFusion TCGA_RNA-Seq HECTD4-AMDHD1 HECTD4 chr12 112819756 - AMDHD1 chr12 96360126 + Exonic hg19 SARC TCGA-DX-A1KW-01A 43 108 Out-of-frame Intra-chr q24.13 q23.1 Seq+ 44579 ChimerSeq STARFusion TCGA_RNA-Seq ELK3-KRT78 ELK3 chr12 96617551 + KRT78 chr12 53242405 - Exonic hg19 SARC TCGA-DX-A1KW-01A 26 126 Out-of-frame Intra-chr q23.1 Transcription factor q13.13 Seq+ 44580 ChimerSeq STARFusion TCGA_RNA-Seq ELK3-KRT78 ELK3 chr12 96617551 + KRT78 chr12 53241905 - Exonic hg19 SARC TCGA-DX-A1KW-01A 14 126 In-Frame Intra-chr q23.1 Transcription factor q13.13 Seq+ 44581 ChimerSeq STARFusion TCGA_RNA-Seq CAMKK2-DIP2B CAMKK2 chr12 121734441 - DIP2B chr12 51019759 + Exonic hg19 SARC TCGA-DX-A1KW-01A 14 70 5'UTR-CDS Intra-chr q24.31 q13.12 Seq+ 44582 ChimerSeq STARFusion TCGA_RNA-Seq CHPT1-ATXN2 CHPT1 chr12 102091912 + ATXN2 chr12 111948386 - Exonic hg19 SARC TCGA-DX-A1KW-01A 10 82 Out-of-frame Intra-chr q23.2 q24.12 Seq+ 44583 ChimerSeq STARFusion TCGA_RNA-Seq CHPT1-ATXN2 CHPT1 chr12 102091912 + ATXN2 chr12 111947802 - Exonic hg19 SARC TCGA-DX-A1KW-01A 9 82 Out-of-frame Intra-chr q23.2 q24.12 Seq+ 44584 ChimerSeq STARFusion TCGA_RNA-Seq CAMKK2-DIP2B CAMKK2 chr12 121734441 - DIP2B chr12 51108178 + Exonic hg19 SARC TCGA-DX-A1KW-01A 7 70 5'UTR-CDS Intra-chr q24.31 q13.12 Seq+ 44585 ChimerSeq STARFusion TCGA_RNA-Seq KRR1-CDK17 KRR1 chr12 75893593 - CDK17 chr12 96707232 - Exonic hg19 SARC TCGA-DX-A1KW-01A 8 24 In-Frame Intra-chr q21.2 q23.1 Seq+ 44586 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC17-CSRP2 ZDHHC17 chr12 77158109 + CSRP2 chr12 77260041 - Exonic hg19 SARC TCGA-DX-A1KW-01A 4 32 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 44587 ChimerSeq STARFusion TCGA_RNA-Seq CCT2-OR8S1 CCT2 chr12 69980598 + OR8S1 chr12 48922286 + Exonic hg19 SARC TCGA-DX-A1KW-01A 4 31 CDS-3'UTR Intra-chr q15 q13.11 Seq+ 44588 ChimerSeq STARFusion TCGA_RNA-Seq KNTC1-BTBD11 KNTC1 chr12 123065217 + BTBD11 chr12 108053138 + Exonic hg19 SARC TCGA-DX-A1KW-01A 7 18 CDS-3'UTR Intra-chr q24.31 q23.3 Seq+ 44589 ChimerSeq STARFusion TCGA_RNA-Seq TMEM120B-GRIP1 TMEM120B chr12 122211419 + GRIP1 chr12 66773216 - Exonic hg19 SARC TCGA-DX-A1KW-01A 6 21 In-Frame Intra-chr q24.31 q14.3 Seq+ 44590 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 SARC TCGA-DX-A1KW-01A 2 7 CDS-5'UTR Intra-chr p12 p12 Transcription factor 44591 ChimerSeq STARFusion TCGA_RNA-Seq FAM189A1-FBN1 FAM189A1 chr15 29544572 - FBN1 chr15 48707964 - Exonic hg19 SARC TCGA-DX-A1KW-01A 3 1 Out-of-frame Intra-chr q21.1 44592 ChimerSeq STARFusion TCGA_RNA-Seq TP53-DNAH2 TP53 chr17 7590695 - DNAH2 chr17 7733618 + Exonic hg19 SARC TCGA-X6-A8C6-01A 12 135 5'UTR-CDS Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.1 Seq+ 44593 ChimerSeq STARFusion TCGA_RNA-Seq CD44-EXT2 CD44 chr11 35160917 + EXT2 chr11 44265699 + Exonic hg19 SARC TCGA-X6-A8C6-01A 30 40 Out-of-frame Intra-chr p13 Oncogene Tumor suppressor gene p11.2 Oncogene Tumor suppressor gene Seq+ 44594 ChimerSeq STARFusion TCGA_RNA-Seq TP53-DNAH2 TP53 chr17 7590695 - DNAH2 chr17 7727152 + Exonic hg19 SARC TCGA-X6-A8C6-01A 6 135 5'UTR-CDS Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.1 Seq+ 44595 ChimerSeq STARFusion TCGA_RNA-Seq TP53-DNAH2 TP53 chr17 7590695 - DNAH2 chr17 7727439 + Exonic hg19 SARC TCGA-X6-A8C6-01A 3 135 5'UTR-CDS Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.1 Seq+ 44596 ChimerSeq STARFusion TCGA_RNA-Seq LAMB1-NRCAM LAMB1 chr7 107626467 - NRCAM chr7 107800937 - Exonic hg19 SARC TCGA-X6-A8C6-01A 11 26 In-Frame Intra-chr q31.1 q31.1 Tumor suppressor gene Seq+ 44597 ChimerSeq STARFusion TCGA_RNA-Seq KIDINS220-COLEC11 KIDINS220 chr2 8890242 - COLEC11 chr2 3651905 + Exonic hg19 SARC TCGA-X6-A8C6-01A 7 18 Out-of-frame Intra-chr p25.1 p25.3 Seq+ 44598 ChimerSeq STARFusion TCGA_RNA-Seq CASC4-LRRC8D CASC4 chr15 44630515 + LRRC8D chr1 90398626 + Exonic hg19 SARC TCGA-X6-A8C6-01A 6 17 CDS-5'UTR Inter-chr q15.3 p22.2 Seq+ 44599 ChimerSeq STARFusion TCGA_RNA-Seq CTPS2-RGN CTPS2 chrX 16716361 - RGN chrX 46940527 + Exonic hg19 SARC TCGA-X6-A8C6-01A 3 29 Out-of-frame Intra-chr p22.2 p11.3 Seq+ 44600 ChimerSeq STARFusion TCGA_RNA-Seq KANK1-LINC00604 KANK1 chr9 540667 + LINC00604 chr5 40267458 + Exonic hg19 SARC TCGA-X6-A8C6-01A 6 17 Out-of-frame Inter-chr p24.3 Tumor suppressor gene p13.1 44601 ChimerSeq STARFusion TCGA_RNA-Seq EMC7-CD27 EMC7 chr15 34388096 - CD27 chr12 6554590 + Exonic hg19 SARC TCGA-X6-A8C6-01A 6 16 Out-of-frame Inter-chr q14 p13.31 Seq+ 44602 ChimerSeq STARFusion TCGA_RNA-Seq SLC44A1-TMEM38B SLC44A1 chr9 108147783 + TMEM38B chr9 108510354 + Exonic hg19 SARC TCGA-X6-A8C6-01A 7 12 Out-of-frame Intra-chr q31.1 q31.2 44603 ChimerSeq STARFusion TCGA_RNA-Seq FBXO8-PALLD FBXO8 chr4 175204561 - PALLD chr4 169589341 + Exonic hg19 SARC TCGA-X6-A8C6-01A 7 9 5'UTR-5'UTR Intra-chr q34.1 q32.3 Seq+ 44604 ChimerSeq STARFusion TCGA_RNA-Seq EMC7-CD27 EMC7 chr15 34388096 - CD27 chr12 6559707 + Exonic hg19 SARC TCGA-X6-A8C6-01A 3 16 Out-of-frame Inter-chr q14 p13.31 Seq+ 44605 ChimerSeq STARFusion TCGA_RNA-Seq REPS2-GLRA2 REPS2 chrX 17121902 + GLRA2 chrX 14708832 + Exonic hg19 SARC TCGA-X6-A8C6-01A 4 12 In-Frame Intra-chr p22.2 p22.2 Seq+ 44606 ChimerSeq STARFusion TCGA_RNA-Seq HIRA-NSMCE2 HIRA chr22 19418963 - NSMCE2 chr8 126369461 + Exonic hg19 SARC TCGA-X6-A8C6-01A 3 15 In-Frame Inter-chr q11.21 Tumor suppressor gene q24.13 Seq+ 44607 ChimerSeq STARFusion TCGA_RNA-Seq ATF7-LYZ ATF7 chr12 54020063 - LYZ chr12 69746000 + Exonic hg19 SARC TCGA-X6-A8C6-01A 4 10 5'UTR-CDS Intra-chr q13.13 Transcription factor q15 Seq+ 44608 ChimerSeq STARFusion TCGA_RNA-Seq KANK1-LINC00604 KANK1 chr9 504754 + LINC00604 chr5 40267458 + Exonic hg19 SARC TCGA-X6-A8C6-01A 2 17 Out-of-frame Inter-chr p24.3 Tumor suppressor gene p13.1 44609 ChimerSeq STARFusion TCGA_RNA-Seq DERA-CA3 DERA chr12 16064348 + CA3 chr8 86351941 + Exonic hg19 SARC TCGA-X6-A8C6-01A 2 16 In-Frame Inter-chr p12.3 q21.2 Seq+ 44610 ChimerSeq STARFusion TCGA_RNA-Seq EMC7-CD27 EMC7 chr15 34388096 - CD27 chr12 6559339 + Exonic hg19 SARC TCGA-X6-A8C6-01A 2 16 Out-of-frame Inter-chr q14 p13.31 Seq+ 44611 ChimerSeq STARFusion TCGA_RNA-Seq LIMK1-SHFM1 LIMK1 chr7 73523366 + SHFM1 chr7 96324203 - Exonic hg19 SARC TCGA-X6-A8C6-01A 3 12 Out-of-frame Intra-chr q11.23 TKL:LISK 44612 ChimerSeq STARFusion TCGA_RNA-Seq LIMK1-GNAT3 LIMK1 chr7 73530288 + GNAT3 chr7 80123963 - Exonic hg19 SARC TCGA-X6-A8C6-01A 4 6 In-Frame Intra-chr q11.23 TKL:LISK q21.11 Seq+ 44613 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM2-NTN4 R3HDM2 chr12 57789532 - NTN4 chr12 96077487 - Exonic hg19 SARC TCGA-X6-A8C6-01A 3 9 5'UTR-CDS Intra-chr q13.3 q22 Seq+ 44614 ChimerSeq STARFusion TCGA_RNA-Seq SUCO-DENND1B SUCO chr1 172547529 + DENND1B chr1 197742062 - Exonic hg19 SARC TCGA-X6-A8C6-01A 3 7 Out-of-frame Intra-chr q24.3 q31.3 Seq+ 44615 ChimerSeq STARFusion TCGA_RNA-Seq LINC00630-FAM179A LINC00630 chrX 102082072 + FAM179A chr2 29217591 + Exonic hg19 SARC TCGA-X6-A8C6-01A 3 5 Out-of-frame Inter-chr q22.1 44616 ChimerSeq STARFusion TCGA_RNA-Seq COLEC11-PINX1 COLEC11 chr2 3652060 + PINX1 chr8 10692285 - Exonic hg19 SARC TCGA-X6-A8C6-01A 2 8 In-Frame Inter-chr p25.3 p23.1 Tumor suppressor gene Seq+ 44617 ChimerSeq STARFusion TCGA_RNA-Seq COLEC11-SOX7 COLEC11 chr2 3652060 + SOX7 chr8 10692285 - Exonic hg19 SARC TCGA-X6-A8C6-01A 2 8 5'UTR-5'UTR Inter-chr p25.3 p23.1 Tumor suppressor gene Transcription factor Seq+ 44618 ChimerSeq STARFusion TCGA_RNA-Seq COLEC11-SOX7 COLEC11 chr2 3652060 + SOX7 chr8 10692285 - Exonic hg19 SARC TCGA-X6-A8C6-01A 2 8 5'UTR-5'UTR Inter-chr p25.3 p23.1 Tumor suppressor gene Transcription factor Seq+ 44619 ChimerSeq STARFusion TCGA_RNA-Seq FSD1L-OTUD7B FSD1L chr9 108210516 + OTUD7B chr1 149949511 - Exonic hg19 SARC TCGA-X6-A8C6-01A 2 5 CDS-5'UTR Inter-chr q31.2 q21.2 Seq+ 44620 ChimerSeq STARFusion TCGA_RNA-Seq UCK2-PBX1 UCK2 chr1 165860559 + PBX1 chr1 164532475 + Exonic hg19 SARC TCGA-X6-A8C6-01A 2 4 In-Frame Intra-chr q24.1 q23.3 Oncogene Transcription factor Seq+ 44621 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KA3-MAP7D2 RPS6KA3 chrX 20252876 - MAP7D2 chrX 20074909 - Exonic hg19 SARC TCGA-X6-A8C6-01A 2 2 In-Frame Intra-chr p22.12 p22.12 Seq+ 44622 ChimerSeq STARFusion TCGA_RNA-Seq LAMB1-HBP1 LAMB1 chr7 107601651 - HBP1 chr7 106820324 + Exonic hg19 SARC TCGA-DX-AB2V-01A 62 186 In-Frame Intra-chr q31.1 Tumor suppressor gene Transcription factor Seq+ 44623 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPM-DMD HNRNPM chr19 8530399 + DMD chrX 31986631 - Exonic hg19 SARC TCGA-DX-AB2V-01A 22 56 In-Frame Inter-chr p13.2 p21.1 Tumor suppressor gene Seq+ 44624 ChimerSeq STARFusion TCGA_RNA-Seq LONP1-FZR1 LONP1 chr19 5694661 - FZR1 chr19 3535148 + Exonic hg19 SARC TCGA-DX-AB2V-01A 7 59 Out-of-frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Seq+ 44625 ChimerSeq STARFusion TCGA_RNA-Seq ZNF740-SEPT9 ZNF740 chr12 53584281 + SEPT9 chr17 75494788 + Exonic hg19 SARC TCGA-DX-AB2V-01A 19 1 Out-of-frame Inter-chr q13.13 Transcription factor 44626 ChimerSeq STARFusion TCGA_RNA-Seq C19orf24-CREB3L3 C19orf24 chr19 1277298 + CREB3L3 chr19 4168348 + Exonic hg19 SARC TCGA-DX-AB2V-01A 6 27 Out-of-frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 44627 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP31-CCDC37 ARHGAP31 chr3 119013851 + CCDC37 chr3 126126015 + Exonic hg19 SARC TCGA-DX-AB2V-01A 6 24 In-Frame Intra-chr q13.32 Seq+ 44628 ChimerSeq STARFusion TCGA_RNA-Seq ERC1-TEKT4P2 ERC1 chr12 1192746 + TEKT4P2 chr21 9966380 - Exonic hg19 SARC TCGA-DX-AB2V-01A 5 22 CDS-3'UTR Inter-chr p11.2 Seq+ 44629 ChimerSeq STARFusion TCGA_RNA-Seq SMIM7-EPS15L1 SMIM7 chr19 16757931 - EPS15L1 chr19 16528915 - Exonic hg19 SARC TCGA-DX-AB2V-01A 4 17 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 44630 ChimerSeq STARFusion TCGA_RNA-Seq CD83-EHF CD83 chr6 14118296 + EHF chr11 34664175 + Exonic hg19 SARC TCGA-DX-AB2V-01A 5 10 In-Frame Inter-chr p23 p13 Tumor suppressor gene Transcription factor Seq+ 44631 ChimerSeq STARFusion TCGA_RNA-Seq SMIM7-EPS15L1 SMIM7 chr19 16757907 - EPS15L1 chr19 16528915 - Exonic hg19 SARC TCGA-DX-AB2V-01A 2 17 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 44632 ChimerSeq STARFusion TCGA_RNA-Seq CPM-MYRFL CPM chr12 69326458 - MYRFL chr12 70345893 + Exonic hg19 SARC TCGA-QC-AA9N-01A 122 859 Out-of-frame Intra-chr q15 q15 Transcription factor Seq+ 44633 ChimerSeq STARFusion TCGA_RNA-Seq PTPRS-ANGPTL4 PTPRS chr19 5286061 - ANGPTL4 chr19 8429090 + Exonic hg19 SARC TCGA-QC-AA9N-01A 75 479 CDS-5'UTR Intra-chr p13.3 p13.2 Tumor suppressor gene Seq+ 44634 ChimerSeq STARFusion TCGA_RNA-Seq PTPRS-ANGPTL4 PTPRS chr19 5286061 - ANGPTL4 chr19 8430838 + Exonic hg19 SARC TCGA-QC-AA9N-01A 15 479 Out-of-frame Intra-chr p13.3 p13.2 Tumor suppressor gene Seq+ 44635 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-ZDHHC17 CTDSP2 chr12 58223231 - ZDHHC17 chr12 77242013 + Exonic hg19 SARC TCGA-QC-AA9N-01A 45 231 Out-of-frame Intra-chr q14.1 q21.2 Seq+ 44636 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-PTPRQ FRS2 chr12 69864310 + PTPRQ chr12 81072381 + Exonic hg19 SARC TCGA-QC-AA9N-01A 29 209 5'UTR-CDS Intra-chr q15 q21.31 Seq+ 44637 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-DNM2 FRS2 chr12 69864310 + DNM2 chr19 10904396 + Exonic hg19 SARC TCGA-QC-AA9N-01A 22 179 5'UTR-CDS Inter-chr q15 p13.2 Seq+ 44638 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-PTPRQ FRS2 chr12 69864310 + PTPRQ chr12 81072469 + Exonic hg19 SARC TCGA-QC-AA9N-01A 7 207 5'UTR-CDS Intra-chr q15 q21.31 Seq+ 44639 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-TMEM200A CTDSP2 chr12 58217812 - TMEM200A chr6 130761552 + Exonic hg19 SARC TCGA-QC-AA9N-01A 28 106 CDS-5'UTR Inter-chr q14.1 q23.1 Seq+ 44640 ChimerSeq STARFusion TCGA_RNA-Seq CPM-BEST3 CPM chr12 69326458 - BEST3 chr12 70049593 - Exonic hg19 SARC TCGA-QC-AA9N-01A 27 71 Out-of-frame Intra-chr q15 q15 Seq+ 44641 ChimerSeq STARFusion TCGA_RNA-Seq SESN1-METTL1 SESN1 chr6 109313990 - METTL1 chr12 58165040 - Exonic hg19 SARC TCGA-QC-AA9N-01A 26 59 Out-of-frame Inter-chr q21 q14.1 Seq+ 44642 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-TMEM200A CTDSP2 chr12 58217812 - TMEM200A chr6 130760493 + Exonic hg19 SARC TCGA-QC-AA9N-01A 14 105 Out-of-frame Inter-chr q14.1 q23.1 Seq+ 44643 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-TMTC2 CPSF6 chr12 69633486 + TMTC2 chr12 83250789 + Exonic hg19 SARC TCGA-QC-AA9N-01A 18 70 Out-of-frame Intra-chr q15 q21.31 Seq+ 44644 ChimerSeq STARFusion TCGA_RNA-Seq DLGAP4-HM13 DLGAP4 chr20 35129014 + HM13 chr20 30102284 + Exonic hg19 SARC TCGA-QC-AA9N-01A 13 70 CDS-5'UTR Intra-chr q11.23 q11.21 Seq+ 44645 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-TMEM200A CTDSP2 chr12 58217792 - TMEM200A chr6 130755496 + Exonic hg19 SARC TCGA-QC-AA9N-01A 4 105 Out-of-frame Inter-chr q14.1 q23.1 Seq+ 44646 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL8-CSRP2 OSBPL8 chr12 76844631 - CSRP2 chr12 77260041 - Exonic hg19 SARC TCGA-QC-AA9N-01A 13 40 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 44647 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA2-TRHDE PPFIA2 chr12 82147752 - TRHDE chr12 72771775 + Exonic hg19 SARC TCGA-QC-AA9N-01A 11 44 In-Frame Intra-chr q21.31 q21.1 Seq+ 44648 ChimerSeq STARFusion TCGA_RNA-Seq CPM-BEST3 CPM chr12 69326458 - BEST3 chr12 70037567 - Exonic hg19 SARC TCGA-QC-AA9N-01A 4 71 CDS-3'UTR Intra-chr q15 q15 Seq+ 44649 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-MYRFL MDM2 chr12 69218431 + MYRFL chr12 70249060 + Exonic hg19 SARC TCGA-QC-AA9N-01A 12 39 Out-of-frame Intra-chr q15 Oncogene q15 Transcription factor Seq+ 44650 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-TMTC2 CPSF6 chr12 69633486 + TMTC2 chr12 83289597 + Exonic hg19 SARC TCGA-QC-AA9N-01A 3 70 In-Frame Intra-chr q15 q21.31 Seq+ 44651 ChimerSeq STARFusion TCGA_RNA-Seq PDE4A-MBD3L3 PDE4A chr19 10541762 + MBD3L3 chr19 7058707 - Exonic hg19 SARC TCGA-QC-AA9N-01A 8 36 CDS-5'UTR Intra-chr p13.2 p13.2 44652 ChimerSeq STARFusion TCGA_RNA-Seq WASF1-SLC41A3 WASF1 chr6 110434529 - SLC41A3 chr3 125731592 - Exonic hg19 SARC TCGA-QC-AA9N-01A 9 31 In-Frame Inter-chr q21 q21.3 Seq+ 44653 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL8-PTPRQ OSBPL8 chr12 76844631 - PTPRQ chr12 80998838 + Exonic hg19 SARC TCGA-QC-AA9N-01A 7 30 In-Frame Intra-chr q21.2 q21.31 Seq+ 44654 ChimerSeq STARFusion TCGA_RNA-Seq CEP57L1-CPM CEP57L1 chr6 109416778 + CPM chr12 69326620 - Exonic hg19 SARC TCGA-QC-AA9N-01A 4 31 5'UTR-5'UTR Inter-chr q21 q15 44655 ChimerSeq STARFusion TCGA_RNA-Seq OS9-ZNF560 OS9 chr12 58090156 + ZNF560 chr19 9608891 - Exonic hg19 SARC TCGA-QC-AA9N-01A 5 24 CDS-5'UTR Inter-chr q13.3 p13.2 Transcription factor Seq+ 44656 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-PTH2R DNM2 chr19 10829079 + PTH2R chr2 209292926 + Exonic hg19 SARC TCGA-QC-AA9N-01A 7 12 Out-of-frame Inter-chr p13.2 q34 Seq+ 44657 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-PIP5K1P1 KCTD20 chr6 36457999 + PIP5K1P1 chr6 7987766 + Exonic hg19 SARC TCGA-QC-AA9N-01A 10 0 Out-of-frame Intra-chr p21.31 p24.3 44658 ChimerSeq STARFusion TCGA_RNA-Seq CCT2-OSBPL8 CCT2 chr12 69993784 + OSBPL8 chr12 76881398 - Exonic hg19 SARC TCGA-QC-AA9N-01A 6 15 CDS-5'UTR Intra-chr q15 q21.2 44659 ChimerSeq STARFusion TCGA_RNA-Seq SMARCA4-MYF5 SMARCA4 chr19 11071850 + MYF5 chr12 81110819 + Exonic hg19 SARC TCGA-QC-AA9N-01A 6 14 5'UTR-5'UTR Inter-chr p13.2 Oncogene Tumor suppressor gene q21.31 Transcription factor Seq+ 44660 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH3-CACNA1A NOTCH3 chr19 15308311 - CACNA1A chr19 13482593 - Exonic hg19 SARC TCGA-QC-AA9N-01A 5 12 In-Frame Intra-chr p13.12 Oncogene Tumor suppressor gene p13.13 Seq+ 44661 ChimerSeq STARFusion TCGA_RNA-Seq SLC44A2-CDK19 SLC44A2 chr19 10713237 + CDK19 chr6 110991744 - Exonic hg19 SARC TCGA-QC-AA9N-01A 3 17 Out-of-frame Inter-chr p13.2 q21 Seq+ 44662 ChimerSeq STARFusion TCGA_RNA-Seq VTA1-PPIL4 VTA1 chr6 142491558 + PPIL4 chr6 149826840 - Exonic hg19 SARC TCGA-QC-AA9N-01A 2 21 In-Frame Intra-chr q24.1 q25.1 Seq+ 44663 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL8-SYT1 OSBPL8 chr12 76953177 - SYT1 chr12 79371579 + Exonic hg19 SARC TCGA-QC-AA9N-01A 4 12 5'UTR-5'UTR Intra-chr q21.2 q21.2 Seq+ 44664 ChimerSeq STARFusion TCGA_RNA-Seq ATP8B4-LINGO1 ATP8B4 chr15 50330965 - LINGO1 chr15 77908242 - Exonic hg19 SARC TCGA-QC-AA9N-01A 3 13 Out-of-frame Intra-chr q21.2 q24.3 Seq+ 44665 ChimerSeq STARFusion TCGA_RNA-Seq RBM39-OCA2 RBM39 chr20 34328746 - OCA2 chr15 28171400 - Exonic hg19 SARC TCGA-QC-AA9N-01A 3 13 Out-of-frame Inter-chr q11.22 q13.1 Seq+ 44666 ChimerSeq STARFusion TCGA_RNA-Seq SLC44A2-PTPRQ SLC44A2 chr19 10713237 + PTPRQ chr12 80981908 + Exonic hg19 SARC TCGA-QC-AA9N-01A 4 9 In-Frame Inter-chr p13.2 q21.31 Seq+ 44667 ChimerSeq STARFusion TCGA_RNA-Seq TP53BP1-ATP8B4 TP53BP1 chr15 43749334 - ATP8B4 chr15 50366384 - Exonic hg19 SARC TCGA-QC-AA9N-01A 5 5 Out-of-frame Intra-chr q15.3 Tumor suppressor gene q21.2 Seq+ 44668 ChimerSeq STARFusion TCGA_RNA-Seq ATRN-C20orf194 ATRN chr20 3452164 + C20orf194 chr20 3363153 - Exonic hg19 SARC TCGA-QC-AA9N-01A 3 10 In-Frame Intra-chr p13 p13 Seq+ 44669 ChimerSeq STARFusion TCGA_RNA-Seq TP53BP1-ATP8B4 TP53BP1 chr15 43762056 - ATP8B4 chr15 50366382 - Exonic hg19 SARC TCGA-QC-AA9N-01A 3 5 Out-of-frame Intra-chr q15.3 Tumor suppressor gene q21.2 Seq+ 44670 ChimerSeq STARFusion TCGA_RNA-Seq CDK19-HSPBAP1 CDK19 chr6 111067329 - HSPBAP1 chr3 122478207 - Exonic hg19 SARC TCGA-QC-AA9N-01A 2 7 In-Frame Inter-chr q21 q21.1 44671 ChimerSeq STARFusion TCGA_RNA-Seq ATP2B4-MRPS21 ATP2B4 chr1 203696699 + MRPS21 chr1 150280482 + Exonic hg19 SARC TCGA-Z4-AAPF-01A 2 5 Out-of-frame Intra-chr q32.1 q21.2 44672 ChimerSeq STARFusion TCGA_RNA-Seq RAB3IP-FRS2 RAB3IP chr12 70132811 + FRS2 chr12 69955960 + Exonic hg19 SARC TCGA-3B-A9HQ-01A 26 80 5'UTR-5'UTR Intra-chr q15 q15 Seq+ 44673 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-TBC1D15 FRS2 chr12 69925836 + TBC1D15 chr12 72265850 + Exonic hg19 SARC TCGA-3B-A9HQ-01A 6 106 5'UTR-5'UTR Intra-chr q15 q21.1 Seq+ 44674 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-TBC1D15 FRS2 chr12 69931763 + TBC1D15 chr12 72265850 + Exonic hg19 SARC TCGA-3B-A9HQ-01A 2 102 5'UTR-5'UTR Intra-chr q15 q21.1 Seq+ 44675 ChimerSeq STARFusion TCGA_RNA-Seq DDB1-SDHA DDB1 chr11 61080971 - SDHA chr5 235259 + Exonic hg19 SARC TCGA-3B-A9HQ-01A 9 47 In-Frame Inter-chr q12.2 p15.33 Oncogene Tumor suppressor gene Seq+ 44676 ChimerSeq STARFusion TCGA_RNA-Seq CNOT2-SSH3 CNOT2 chr12 70637260 + SSH3 chr11 67074842 + Exonic hg19 SARC TCGA-3B-A9HQ-01A 13 11 5'UTR-CDS Inter-chr q15 q13.2 Seq+ 44677 ChimerSeq STARFusion TCGA_RNA-Seq E2F7-RAP1B E2F7 chr12 77458323 - RAP1B chr12 69042479 + Exonic hg19 SARC TCGA-3B-A9HQ-01A 6 25 CDS-5'UTR Intra-chr q21.2 Transcription factor q15 44678 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-MS4A8 UVRAG chr11 75718665 + MS4A8 chr11 60470851 + Exonic hg19 SARC TCGA-3B-A9HQ-01A 6 23 Out-of-frame Intra-chr q13.5 Tumor suppressor gene q12.2 Seq+ 44679 ChimerSeq STARFusion TCGA_RNA-Seq NEXN-PTGFR NEXN chr1 78354444 + PTGFR chr1 78958357 + Exonic hg19 SARC TCGA-3B-A9HQ-01A 6 14 5'UTR-5'UTR Intra-chr p31.1 p31.1 Seq+ 44680 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-CNOT2 FRS2 chr12 69864310 + CNOT2 chr12 70671912 + Exonic hg19 SARC TCGA-3B-A9HQ-01A 4 15 5'UTR-5'UTR Intra-chr q15 q15 44681 ChimerSeq STARFusion TCGA_RNA-Seq ACSS3-AVIL ACSS3 chr12 81472210 + AVIL chr12 58204910 - Exonic hg19 SARC TCGA-3B-A9HQ-01A 4 11 In-Frame Intra-chr q21.31 q14.1 Seq+ 44682 ChimerSeq STARFusion TCGA_RNA-Seq TMTC2-FRS2 TMTC2 chr12 83081448 + FRS2 chr12 69924645 + Exonic hg19 SARC TCGA-3B-A9HQ-01A 2 6 CDS-5'UTR Intra-chr q21.31 q15 44683 ChimerSeq STARFusion TCGA_RNA-Seq ERC1-MRPS9 ERC1 chr12 1481143 + MRPS9 chr2 105716128 + Exonic hg19 SARC TCGA-QQ-A5VC-01A 25 190 Out-of-frame Inter-chr q12.1 Seq+ 44684 ChimerSeq STARFusion TCGA_RNA-Seq TRERF1-SUPT3H TRERF1 chr6 42210986 - SUPT3H chr6 44988369 - Exonic hg19 SARC TCGA-QQ-A5VC-01A 10 76 In-Frame Intra-chr p21.1 Transcription factor p21.1 Seq+ 44685 ChimerSeq STARFusion TCGA_RNA-Seq NEK7-SMYD3 NEK7 chr1 198201767 + SMYD3 chr1 246093239 - Exonic hg19 SARC TCGA-QQ-A5VC-01A 7 26 In-Frame Intra-chr q31.3 Other:NEK q44 Transcription factor Seq+ 44686 ChimerSeq STARFusion TCGA_RNA-Seq HBG2-HBE1 HBG2 chr11 5526581 - HBE1 chr11 5291386 - Exonic hg19 SARC TCGA-QQ-A5VC-01A 2 16 Out-of-frame Intra-chr p15.4 p15.4 44687 ChimerSeq STARFusion TCGA_RNA-Seq EP400-NOC4L EP400 chr12 132446499 + NOC4L chr12 132635526 + Exonic hg19 SARC TCGA-QQ-A5VC-01A 2 4 Out-of-frame Intra-chr q24.33 Oncogene q24.33 Seq+ 44688 ChimerSeq STARFusion TCGA_RNA-Seq NARS2-CLNS1A NARS2 chr11 78239888 - CLNS1A chr11 77340944 - Exonic hg19 SARC TCGA-QQ-A5VC-01A 2 2 In-Frame Intra-chr q14.1 q14.1 44689 ChimerSeq STARFusion TCGA_RNA-Seq ZEB1-MSRB2 ZEB1 chr10 31608221 + MSRB2 chr10 23399171 + Exonic hg19 SARC TCGA-QQ-A5VC-01A 2 2 Out-of-frame Intra-chr p11.22 Transcription factor p12.2 Seq+ 44690 ChimerSeq STARFusion TCGA_RNA-Seq PID1-MRPS6 PID1 chr2 230020534 - MRPS6 chr21 35497641 + Exonic hg19 SARC TCGA-DX-A3U7-01A 45 361 In-Frame Inter-chr q36.3 q22.11 Seq+ 44691 ChimerSeq STARFusion TCGA_RNA-Seq AGAP1-ATG4B AGAP1 chr2 236403493 + ATG4B chr2 242590425 + Exonic hg19 SARC TCGA-DX-A3U7-01A 4 24 In-Frame Intra-chr q37.2 q37.3 Seq+ 44692 ChimerSeq STARFusion TCGA_RNA-Seq ZNF793-ST3GAL6 ZNF793 chr19 38014356 + ST3GAL6 chr3 98539632 + Exonic hg19 SARC TCGA-DX-A3U7-01A 3 10 CDS-3'UTR Inter-chr q13.12 Transcription factor q12.1 Seq+ 44693 ChimerSeq STARFusion TCGA_RNA-Seq TTLL1-PACSIN2 TTLL1 chr22 43442416 - PACSIN2 chr22 43308163 - Exonic hg19 SARC TCGA-DX-A3U7-01A 2 1 CDS-5'UTR Intra-chr q13.2 q13.2 44694 ChimerSeq STARFusion TCGA_RNA-Seq HDAC7-SRGAP1 HDAC7 chr12 48181828 - SRGAP1 chr12 64536075 + Exonic hg19 SARC TCGA-DX-A3LT-01A 104 671 In-Frame Intra-chr q13.11 q14.2 Seq+ 44695 ChimerSeq STARFusion TCGA_RNA-Seq FAR1-C3orf55 FAR1 chr11 13722039 + C3orf55 chr3 157271019 + Exonic hg19 SARC TCGA-DX-A3LT-01A 26 204 CDS-5'UTR Inter-chr p15.3 Seq+ 44696 ChimerSeq STARFusion TCGA_RNA-Seq ARNTL-RIC8B ARNTL chr11 13381971 + RIC8B chr12 107219504 + Exonic hg19 SARC TCGA-DX-A3LT-01A 41 129 In-Frame Inter-chr p15.3 Tumor suppressor gene Transcription factor q23.3 Seq+ 44697 ChimerSeq STARFusion TCGA_RNA-Seq NAP1L1-PTPRR NAP1L1 chr12 76478347 - PTPRR chr12 71158558 - Exonic hg19 SARC TCGA-DX-A3LT-01A 29 86 5'UTR-CDS Intra-chr q21.2 q15 Seq+ 44698 ChimerSeq STARFusion TCGA_RNA-Seq LDLRAD3-MOB2 LDLRAD3 chr11 35965694 + MOB2 chr11 1502115 - Exonic hg19 SARC TCGA-DX-A3LT-01A 9 103 Out-of-frame Intra-chr p13 p15.5 Seq+ 44699 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC13-MGAT4C ZDHHC13 chr11 19174231 + MGAT4C chr12 86383330 - Exonic hg19 SARC TCGA-DX-A3LT-01A 3 56 CDS-5'UTR Inter-chr p15.1 Seq+ 44700 ChimerSeq STARFusion TCGA_RNA-Seq PTPRR-SLC6A15 PTPRR chr12 71147971 - SLC6A15 chr12 85286087 - Exonic hg19 SARC TCGA-DX-A3LT-01A 4 50 CDS-5'UTR Intra-chr q15 q21.31 Seq+ 44701 ChimerSeq STARFusion TCGA_RNA-Seq SLC6A15-MYRFL SLC6A15 chr12 85306302 - MYRFL chr12 70297424 + Exonic hg19 SARC TCGA-DX-A3LT-01A 4 23 Out-of-frame Intra-chr q21.31 q15 Transcription factor Seq+ 44702 ChimerSeq STARFusion TCGA_RNA-Seq MOB2-KIAA1549L MOB2 chr11 1501623 - KIAA1549L chr11 33667232 + Exonic hg19 SARC TCGA-DX-A3LT-01A 4 10 Out-of-frame Intra-chr p15.5 p13 Seq+ 44703 ChimerSeq STARFusion TCGA_RNA-Seq SPARC-ELK3 SPARC chr5 151042567 - ELK3 chr12 96640958 + Exonic hg19 SARC TCGA-DX-A3LT-01A 5 3 Out-of-frame Inter-chr q33.1 Tumor suppressor gene q23.1 Transcription factor 44704 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF3-FAM19A5 ZNRF3 chr22 29383189 + FAM19A5 chr22 49042409 + Exonic hg19 SARC TCGA-DX-A3LT-01A 2 10 Out-of-frame Intra-chr q12.1 q13.32 Seq+ 44705 ChimerSeq STARFusion TCGA_RNA-Seq LATS2-MYLK LATS2 chr13 21635485 - MYLK chr3 123386034 - Exonic hg19 SARC TCGA-K1-A42X-01A 28 207 5'UTR-CDS Inter-chr q12.11 AGC:NDR Tumor suppressor gene q21.1 Seq+ 44706 ChimerSeq STARFusion TCGA_RNA-Seq LATS2-MYLK LATS2 chr13 21634332 - MYLK chr3 123386033 - Exonic hg19 SARC TCGA-K1-A42X-01A 12 207 Out-of-frame Inter-chr q12.11 AGC:NDR Tumor suppressor gene q21.1 Seq+ 44707 ChimerSeq STARFusion TCGA_RNA-Seq ZNF236-QRSL1 ZNF236 chr18 74563895 + QRSL1 chr6 107088224 + Exonic hg19 SARC TCGA-K1-A42X-01A 17 48 In-Frame Inter-chr q23 Transcription factor q21 Seq+ 44708 ChimerSeq STARFusion TCGA_RNA-Seq SMAD3-AAGAB SMAD3 chr15 67358698 + AAGAB chr15 67496486 - Exonic hg19 SARC TCGA-K1-A42X-01A 8 76 Out-of-frame Intra-chr q22.33 Transcription factor q23 Seq+ 44709 ChimerSeq STARFusion TCGA_RNA-Seq SMAD3-AAGAB SMAD3 chr15 67358698 + AAGAB chr15 67495236 - Exonic hg19 SARC TCGA-K1-A42X-01A 5 76 Out-of-frame Intra-chr q22.33 Transcription factor q23 Seq+ 44710 ChimerSeq STARFusion TCGA_RNA-Seq ATRN-UQCRB ATRN chr20 3541552 + UQCRB chr8 97245455 - Exonic hg19 SARC TCGA-K1-A42X-01A 8 52 In-Frame Inter-chr p13 q22.1 Seq+ 44711 ChimerSeq STARFusion TCGA_RNA-Seq PALM2-PCP4 PALM2 chr9 112694308 + PCP4 chr21 41270401 + Exonic hg19 SARC TCGA-K1-A42X-01A 3 45 Out-of-frame Inter-chr q31.3 q22.2 Seq+ 44712 ChimerSeq STARFusion TCGA_RNA-Seq TOPBP1-SPDEF TOPBP1 chr3 133341935 - SPDEF chr6 34512261 - Exonic hg19 SARC TCGA-K1-A42X-01A 6 23 CDS-5'UTR Inter-chr q22.1 p21.31 Transcription factor Seq+ 44713 ChimerSeq STARFusion TCGA_RNA-Seq AKAP2-PCP4 AKAP2 chr9 112694308 + PCP4 chr21 41270401 + Exonic hg19 SARC TCGA-K1-A42X-01A 3 24 5'UTR-CDS Inter-chr q31.3 q22.2 44714 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD13A-TCHP ANKRD13A chr12 110437589 + TCHP chr12 110418710 + Exonic hg19 SARC TCGA-K1-A42X-01A 5 8 CDS-3'UTR Intra-chr q24.11 q24.11 Tumor suppressor gene 44715 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC14-ARID1B ZDHHC14 chr6 157803298 + ARID1B chr6 157431606 + Exonic hg19 SARC TCGA-K1-A42X-01A 3 8 Out-of-frame Intra-chr q25.3 q25.3 Oncogene Seq+ 44716 ChimerSeq STARFusion TCGA_RNA-Seq HHIPL1-CCNK HHIPL1 chr14 100111799 + CCNK chr14 99973413 + Exonic hg19 SARC TCGA-K1-A42X-01A 2 7 Out-of-frame Intra-chr q32.2 q32.2 Seq+ 44717 ChimerSeq STARFusion TCGA_RNA-Seq PDLIM1-PLCE1 PDLIM1 chr10 97023621 - PLCE1 chr10 95987063 + Exonic hg19 SARC TCGA-K1-A42X-01A 2 7 Out-of-frame Intra-chr q23.33 q23.33 Tumor suppressor gene Seq+ 44718 ChimerSeq STARFusion TCGA_RNA-Seq NT5C2-DLEU1 NT5C2 chr10 104899163 - DLEU1 chr13 50678840 + Exonic hg19 SARC TCGA-FX-A76Y-01A 21 116 CDS-5'UTR Inter-chr q24.33 q14.2 Tumor suppressor gene Seq+ 44719 ChimerSeq STARFusion TCGA_RNA-Seq ACTR10-MKX ACTR10 chr14 58667012 + MKX chr10 27964483 - Exonic hg19 SARC TCGA-FX-A76Y-01A 12 34 Out-of-frame Inter-chr q23.1 p12.1 Transcription factor Seq+ 44720 ChimerSeq STARFusion TCGA_RNA-Seq PLXDC2-PDCD11 PLXDC2 chr10 20466338 + PDCD11 chr10 105182745 + Exonic hg19 SARC TCGA-FX-A76Y-01A 5 20 Out-of-frame Intra-chr p12.31 q24.33 Seq+ 44721 ChimerSeq STARFusion TCGA_RNA-Seq KCNMA1-ESD KCNMA1 chr10 79163620 - ESD chr13 47367579 - Exonic hg19 SARC TCGA-FX-A76Y-01A 3 12 CDS-5'UTR Inter-chr q22.3 q14.2 Seq+ 44722 ChimerSeq STARFusion TCGA_RNA-Seq MYPN-PLXDC2 MYPN chr10 69918384 + PLXDC2 chr10 20453397 + Exonic hg19 SARC TCGA-FX-A76Y-01A 3 10 Out-of-frame Intra-chr q21.3 p12.31 Seq+ 44723 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0355-PDCD2L KIAA0355 chr19 34745519 + PDCD2L chr19 34912424 + Exonic hg19 SARC TCGA-FX-A76Y-01A 3 3 5'UTR-CDS Intra-chr q13.11 Seq+ 44724 ChimerSeq STARFusion TCGA_RNA-Seq LRP8-RPL14 LRP8 chr1 53793534 - RPL14 chr3 40503521 + Exonic hg19 SARC TCGA-FX-A76Y-01A 3 1 Out-of-frame Inter-chr p32.3 p22.1 44725 ChimerSeq STARFusion TCGA_RNA-Seq GRTP1-SH3PXD2A GRTP1 chr13 113999178 - SH3PXD2A chr10 105526927 - Exonic hg19 SARC TCGA-FX-A76Y-01A 2 4 Out-of-frame Inter-chr q34 q24.33 Seq+ 44726 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H3-TRAPPC9 ZC3H3 chr8 144618427 - TRAPPC9 chr8 141461482 - Exonic hg19 SARC TCGA-3B-A9HY-01A 2 6 Out-of-frame Intra-chr q24.3 Seq+ 44727 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-ATXN1 FRS2 chr12 69864310 + ATXN1 chr6 16522919 - Exonic hg19 SARC TCGA-DX-A1L3-01A 14 230 5'UTR-5'UTR Inter-chr q15 p22.3 Seq+ 44728 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA5-CPM PLEKHA5 chr12 19475601 + CPM chr12 69351458 - Exonic hg19 SARC TCGA-DX-A1L3-01A 46 92 CDS-5'UTR Intra-chr p12.3 q15 Seq+ 44729 ChimerSeq STARFusion TCGA_RNA-Seq TRIO-TERT TRIO chr5 14420130 + TERT chr5 1282739 - Exonic hg19 SARC TCGA-DX-A1L3-01A 31 134 In-Frame Intra-chr p15.2 p15.33 Oncogene Seq+ 44730 ChimerSeq STARFusion TCGA_RNA-Seq ATXN1-DNM3 ATXN1 chr6 16486203 - DNM3 chr1 172348158 + Exonic hg19 SARC TCGA-DX-A1L3-01A 24 107 5'UTR-CDS Inter-chr p22.3 q24.3 Seq+ 44731 ChimerSeq STARFusion TCGA_RNA-Seq ATXN1-SLC24A1 ATXN1 chr6 16486203 - SLC24A1 chr15 65911218 + Exonic hg19 SARC TCGA-DX-A1L3-01A 14 113 5'UTR-5'UTR Inter-chr p22.3 q22.31 Seq+ 44732 ChimerSeq STARFusion TCGA_RNA-Seq CNOT2-CRADD CNOT2 chr12 70637260 + CRADD chr12 94243746 + Exonic hg19 SARC TCGA-DX-A1L3-01A 25 31 5'UTR-CDS Intra-chr q15 q22 Seq+ 44733 ChimerSeq STARFusion TCGA_RNA-Seq ATXN1-SLC24A1 ATXN1 chr6 16486203 - SLC24A1 chr15 65916293 + Exonic hg19 SARC TCGA-DX-A1L3-01A 4 113 5'UTR-5'UTR Inter-chr p22.3 q22.31 Seq+ 44734 ChimerSeq STARFusion TCGA_RNA-Seq SUCO-CDH18 SUCO chr1 172502637 + CDH18 chr5 19981287 - Exonic hg19 SARC TCGA-DX-A1L3-01A 9 87 Out-of-frame Inter-chr q24.3 p14.3 Seq+ 44735 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-FMO6P MDM2 chr12 69229764 + FMO6P chr1 171112320 + Exonic hg19 SARC TCGA-DX-A1L3-01A 15 56 CDS-5'UTR Inter-chr q15 Oncogene q24.3 Seq+ 44736 ChimerSeq STARFusion TCGA_RNA-Seq MAP2K5-MYRFL MAP2K5 chr15 67893087 + MYRFL chr12 70272808 + Exonic hg19 SARC TCGA-DX-A1L3-01A 10 66 Out-of-frame Inter-chr q23 STE:STE7 q15 Transcription factor Seq+ 44737 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC17-RAB3IP ZDHHC17 chr12 77158109 + RAB3IP chr12 70149164 + Exonic hg19 SARC TCGA-DX-A1L3-01A 6 77 Out-of-frame Intra-chr q21.2 q15 Seq+ 44738 ChimerSeq STARFusion TCGA_RNA-Seq SUCO-CDH18 SUCO chr1 172502637 + CDH18 chr5 19981283 - Exonic hg19 SARC TCGA-DX-A1L3-01A 3 87 Out-of-frame Inter-chr q24.3 p14.3 Seq+ 44739 ChimerSeq STARFusion TCGA_RNA-Seq FAM78B-RAB3IP FAM78B chr1 166135223 - RAB3IP chr12 70206744 + Exonic hg19 SARC TCGA-DX-A1L3-01A 6 69 In-Frame Inter-chr q24.1 q15 Seq+ 44740 ChimerSeq STARFusion TCGA_RNA-Seq FAM78B-RAB3IP FAM78B chr1 166135223 - RAB3IP chr12 70206558 + Exonic hg19 SARC TCGA-DX-A1L3-01A 3 69 In-Frame Inter-chr q24.1 q15 Seq+ 44741 ChimerSeq STARFusion TCGA_RNA-Seq SUCO-MYRFL SUCO chr1 172502637 + MYRFL chr12 70249060 + Exonic hg19 SARC TCGA-DX-A1L3-01A 8 39 Out-of-frame Inter-chr q24.3 q15 Transcription factor Seq+ 44742 ChimerSeq STARFusion TCGA_RNA-Seq FBXL7-CCT5 FBXL7 chr5 15616181 + CCT5 chr5 10254257 + Exonic hg19 SARC TCGA-DX-A1L3-01A 6 40 Out-of-frame Intra-chr p15.1 p15.2 Seq+ 44743 ChimerSeq STARFusion TCGA_RNA-Seq SUCO-MYRFL SUCO chr1 172502637 + MYRFL chr12 70273981 + Exonic hg19 SARC TCGA-DX-A1L3-01A 2 39 Out-of-frame Inter-chr q24.3 q15 Transcription factor Seq+ 44744 ChimerSeq STARFusion TCGA_RNA-Seq IQCH-CTNND2 IQCH chr15 67553732 + CTNND2 chr5 11199773 - Exonic hg19 SARC TCGA-DX-A1L3-01A 5 15 In-Frame Inter-chr q23 p15.2 Seq+ 44745 ChimerSeq STARFusion TCGA_RNA-Seq SPARC-ELK3 SPARC chr5 151042567 - ELK3 chr12 96640958 + Exonic hg19 SARC TCGA-DX-A1L3-01A 8 1 Out-of-frame Inter-chr q33.1 Tumor suppressor gene q23.1 Transcription factor 44746 ChimerSeq STARFusion TCGA_RNA-Seq UHRF1-PEX11G UHRF1 chr19 4947223 + PEX11G chr19 7543262 - Exonic hg19 SARC TCGA-DX-A1L3-01A 2 25 In-Frame Intra-chr p13.3 p13.2 Seq+ 44747 ChimerSeq STARFusion TCGA_RNA-Seq KIFAP3-C1orf112 KIFAP3 chr1 169985603 - C1orf112 chr1 169806068 + Exonic hg19 SARC TCGA-DX-A1L3-01A 2 21 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 44748 ChimerSeq STARFusion TCGA_RNA-Seq SLC35E3-MYRFL SLC35E3 chr12 69145970 + MYRFL chr12 70345893 + Exonic hg19 SARC TCGA-DX-A1L3-01A 2 13 Out-of-frame Intra-chr q15 q15 Transcription factor Seq+ 44749 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-COL1A1 SEPT9 chr17 75471345 + COL1A1 chr17 48265510 - Exonic hg19 SARC TCGA-DX-A1L3-01A 4 2 5'UTR-CDS Intra-chr q21.33 Oncogene 44750 ChimerSeq STARFusion TCGA_RNA-Seq KDELC2-MDM2 KDELC2 chr11 108348751 - MDM2 chr12 69214105 + Exonic hg19 SARC TCGA-DX-A1L3-01A 2 3 Out-of-frame Inter-chr q22.3 q15 Oncogene 44751 ChimerSeq STARFusion TCGA_RNA-Seq MPZL1-SELP MPZL1 chr1 167734986 + SELP chr1 169586652 - Exonic hg19 SARC TCGA-DX-A1L3-01A 2 3 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 44752 ChimerSeq STARFusion TCGA_RNA-Seq UBE3C-PTPRN2 UBE3C chr7 156932032 + PTPRN2 chr7 157931207 - Exonic hg19 SARC TCGA-DX-AB2S-01A 4 30 Out-of-frame Intra-chr q36.3 q36.3 Seq+ 44753 ChimerSeq STARFusion TCGA_RNA-Seq PTPRS-ZNF627 PTPRS chr19 5274210 - ZNF627 chr19 11725342 + Exonic hg19 SARC TCGA-DX-AB2S-01A 5 24 In-Frame Intra-chr p13.3 p13.2 Transcription factor Seq+ 44754 ChimerSeq STARFusion TCGA_RNA-Seq COL1A2-MBNL1 COL1A2 chr7 94027071 + MBNL1 chr3 151987554 + Exonic hg19 SARC TCGA-DX-AB2S-01A 10 1 Out-of-frame Inter-chr q21.3 q25.1 44755 ChimerSeq STARFusion TCGA_RNA-Seq NRK-NAP1L4P2 NRK chrX 105075112 + NAP1L4P2 chrX 105709918 - Exonic hg19 SARC TCGA-DX-AB2S-01A 5 16 Out-of-frame Intra-chr q22.3 STE:STE20 q22.3 Seq+ 44756 ChimerSeq STARFusion TCGA_RNA-Seq DCUN1D4-IKZF1 DCUN1D4 chr4 52758017 + IKZF1 chr7 50444231 + Exonic hg19 SARC TCGA-IE-A4EJ-01A 6 31 Out-of-frame Inter-chr q12 p12.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 44757 ChimerSeq STARFusion TCGA_RNA-Seq PIR-ZNF138 PIR chrX 15415571 - ZNF138 chr7 64291829 + Exonic hg19 SARC TCGA-IE-A4EJ-01A 4 4 In-Frame Inter-chr p22.2 q11.21 Transcription factor Seq+ 44758 ChimerSeq STARFusion TCGA_RNA-Seq SH3KBP1-ZNF92 SH3KBP1 chrX 19701941 - ZNF92 chr7 64852815 + Exonic hg19 SARC TCGA-IE-A4EJ-01A 3 2 In-Frame Inter-chr p22.12 q11.21 Transcription factor Seq+ 44759 ChimerSeq STARFusion TCGA_RNA-Seq SH3KBP1-ZNF92 SH3KBP1 chrX 19701941 - ZNF92 chr7 64863254 + Exonic hg19 SARC TCGA-IE-A4EJ-01A 3 2 Out-of-frame Inter-chr p22.12 q11.21 Transcription factor Seq+ 44760 ChimerSeq STARFusion TCGA_RNA-Seq RAB21-DNM3 RAB21 chr12 72149068 + DNM3 chr1 172050972 + Exonic hg19 SARC TCGA-DX-AATS-01A 55 531 In-Frame Inter-chr q21.1 q24.3 Seq+ 44761 ChimerSeq STARFusion TCGA_RNA-Seq SYT1-EPYC SYT1 chr12 79441142 + EPYC chr12 91396355 - Exonic hg19 SARC TCGA-DX-AATS-01A 77 290 5'UTR-5'UTR Intra-chr q21.2 q21.33 Seq+ 44762 ChimerSeq STARFusion TCGA_RNA-Seq KCNMB4-ARHGAP9 KCNMB4 chr12 70760850 + ARHGAP9 chr12 57871052 - Exonic hg19 SARC TCGA-DX-AATS-01A 96 167 In-Frame Intra-chr q15 q13.3 Seq+ 44763 ChimerSeq STARFusion TCGA_RNA-Seq SYT1-EPYC SYT1 chr12 79441142 + EPYC chr12 91398813 - Exonic hg19 SARC TCGA-DX-AATS-01A 27 285 5'UTR-5'UTR Intra-chr q21.2 q21.33 Seq+ 44764 ChimerSeq STARFusion TCGA_RNA-Seq SLC16A7-SYT1 SLC16A7 chr12 59990017 + SYT1 chr12 79441077 + Exonic hg19 SARC TCGA-DX-AATS-01A 20 114 5'UTR-5'UTR Intra-chr q14.1 q21.2 Seq+ 44765 ChimerSeq STARFusion TCGA_RNA-Seq YY1AP1-ARHGEF2 YY1AP1 chr1 155638418 - ARHGEF2 chr1 155952991 - Exonic hg19 SARC TCGA-DX-AATS-01A 22 99 CDS-5'UTR Intra-chr q22 q22 Seq+ 44766 ChimerSeq STARFusion TCGA_RNA-Seq YY1AP1-ARHGEF2 YY1AP1 chr1 155640111 - ARHGEF2 chr1 155952991 - Exonic hg19 SARC TCGA-DX-AATS-01A 4 83 CDS-5'UTR Intra-chr q22 q22 Seq+ 44767 ChimerSeq STARFusion TCGA_RNA-Seq RAB21-SLC4A8 RAB21 chr12 72167802 + SLC4A8 chr12 51863398 + Exonic hg19 SARC TCGA-DX-AATS-01A 12 43 Out-of-frame Intra-chr q21.1 q13.13 Seq+ 44768 ChimerSeq STARFusion TCGA_RNA-Seq LGR5-FAM19A2 LGR5 chr12 71928966 + FAM19A2 chr12 62261207 - Exonic hg19 SARC TCGA-DX-AATS-01A 11 26 CDS-5'UTR Intra-chr q21.1 q14.1 Seq+ 44769 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-LRRIQ1 TSFM chr12 58180945 + LRRIQ1 chr12 85517848 + Exonic hg19 SARC TCGA-DX-AATS-01A 5 28 Out-of-frame Intra-chr q14.1 q21.31 Seq+ 44770 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-LRRIQ1 TSFM chr12 58180945 + LRRIQ1 chr12 85546058 + Exonic hg19 SARC TCGA-DX-AATS-01A 3 28 In-Frame Intra-chr q14.1 q21.31 Seq+ 44771 ChimerSeq STARFusion TCGA_RNA-Seq RWDD1-CEP85L RWDD1 chr6 116906020 + CEP85L chr6 118845083 - Exonic hg19 SARC TCGA-DX-AATS-01A 4 22 In-Frame Intra-chr q22.1 q22.31 Seq+ 44772 ChimerSeq STARFusion TCGA_RNA-Seq ZNF251-CHMP4C ZNF251 chr8 145979068 - CHMP4C chr8 82665299 + Exonic hg19 SARC TCGA-DX-AATS-01A 5 18 In-Frame Intra-chr Transcription factor q21.13 Seq+ 44773 ChimerSeq STARFusion TCGA_RNA-Seq BET1L-RNMT BET1L chr11 180209 - RNMT chr18 13762038 + Exonic hg19 SARC TCGA-DX-AATS-01A 3 14 Out-of-frame Inter-chr p15.5 p11.21 44774 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-METTL11B TSFM chr12 58180945 + METTL11B chr1 170127110 + Exonic hg19 SARC TCGA-DX-AATS-01A 2 18 Out-of-frame Inter-chr q14.1 q24.2 Seq+ 44775 ChimerSeq STARFusion TCGA_RNA-Seq RAB21-MGAT4C RAB21 chr12 72167802 + MGAT4C chr12 86443501 - Exonic hg19 SARC TCGA-DX-AATS-01A 3 5 CDS-5'UTR Intra-chr q21.1 Seq+ 44776 ChimerSeq STARFusion TCGA_RNA-Seq NBEA-FNDC3A NBEA chr13 35806756 + FNDC3A chr13 49688791 + Exonic hg19 SARC TCGA-HS-A5NA-01A 3 10 In-Frame Intra-chr q13.3 q14.2 Seq+ 44777 ChimerSeq STARFusion TCGA_RNA-Seq ASPM-F13B ASPM chr1 197111461 - F13B chr1 197008541 - Exonic hg19 SARC TCGA-HS-A5NA-01A 2 13 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 44778 ChimerSeq STARFusion TCGA_RNA-Seq ASPM-F13B ASPM chr1 197111461 - F13B chr1 197009865 - Exonic hg19 SARC TCGA-HS-A5NA-01A 2 13 In-Frame Intra-chr q31.3 q31.3 Seq+ 44779 ChimerSeq STARFusion TCGA_RNA-Seq PAN3-FLT3 PAN3 chr13 28713224 + FLT3 chr13 28636206 - Exonic hg19 SARC TCGA-HS-A5NA-01A 2 7 Out-of-frame Intra-chr q12.2 q12.2 TK:PDGFR Oncogene Tumor suppressor gene Seq+ 44780 ChimerSeq STARFusion TCGA_RNA-Seq LINC00670-MYOCD LINC00670 chr17 12494065 + MYOCD chr17 12608445 + Exonic hg19 SARC TCGA-HS-A5NA-01A 2 3 Out-of-frame Intra-chr p12 p12 44781 ChimerSeq STARFusion TCGA_RNA-Seq NEO1-ZFAT NEO1 chr15 73428368 + ZFAT chr8 135669980 - Exonic hg19 SARC TCGA-MB-A8JK-01A 9 32 In-Frame Inter-chr q24.1 q24.22 Transcription factor Seq+ 44782 ChimerSeq STARFusion TCGA_RNA-Seq NFIX-SEMA3A NFIX chr19 13136366 + SEMA3A chr7 83614793 - Exonic hg19 SARC TCGA-MB-A8JK-01A 3 7 Out-of-frame Inter-chr p13.13 Transcription factor q21.11 Seq+ 44783 ChimerSeq STARFusion TCGA_RNA-Seq OXCT1-OR4F17 OXCT1 chr5 41840553 - OR4F17 chr19 110625 + Exonic hg19 SARC TCGA-MB-A8JK-01A 2 9 CDS-5'UTR Inter-chr p13.1 p13.3 Seq+ 44784 ChimerSeq STARFusion TCGA_RNA-Seq FOXO1-LINC00598 FOXO1 chr13 41239720 - LINC00598 chr13 41048232 - Exonic hg19 SARC TCGA-MB-A8JK-01A 2 1 Out-of-frame Intra-chr q14.11 Oncogene Tumor suppressor gene Transcription factor q14.11 44785 ChimerSeq STARFusion TCGA_RNA-Seq UBP1-TRIM71 UBP1 chr3 33481228 - TRIM71 chr3 32915310 + Exonic hg19 SARC TCGA-MB-A8JK-01A 2 0 Out-of-frame Intra-chr p22.3 Transcription factor p22.3 44786 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS5-CYYR1 ADAMTS5 chr21 28315699 - CYYR1 chr21 27852748 - Exonic hg19 SARC TCGA-SI-AA8C-01A 36 50 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 44787 ChimerSeq STARFusion TCGA_RNA-Seq CTNNA1-CYSTM1 CTNNA1 chr5 138119061 + CYSTM1 chr5 139622890 + Exonic hg19 SARC TCGA-SI-AA8C-01A 10 43 In-Frame Intra-chr q31.2 Oncogene q31.3 Seq+ 44788 ChimerSeq STARFusion TCGA_RNA-Seq SEPT11-TMEM196 SEPT11 chr4 77941971 + TMEM196 chr7 19759502 - Exonic hg19 SARC TCGA-SI-AA8C-01A 16 13 Out-of-frame Inter-chr q21.1 p21.1 Seq+ 44789 ChimerSeq STARFusion TCGA_RNA-Seq APPBP2-SETD2 APPBP2 chr17 58571827 - SETD2 chr3 47061330 - Exonic hg19 SARC TCGA-SI-AA8C-01A 10 18 Out-of-frame Inter-chr q23.2 p21.31 Oncogene Tumor suppressor gene Seq+ 44790 ChimerSeq STARFusion TCGA_RNA-Seq GRB10-SCMH1 GRB10 chr7 50682467 - SCMH1 chr1 41494398 - Exonic hg19 SARC TCGA-SI-AA8C-01A 9 4 Out-of-frame Inter-chr p12.1 p34.2 Transcription factor Seq+ 44791 ChimerSeq STARFusion TCGA_RNA-Seq SRFBP1-ZNF474 SRFBP1 chr5 121330365 + ZNF474 chr5 121515245 + Exonic hg19 SARC TCGA-SI-AA8C-01A 9 2 CDS-3'UTR Intra-chr q23.1 q23.2 Transcription factor 44792 ChimerSeq STARFusion TCGA_RNA-Seq EXO5-MTF1 EXO5 chr1 40974580 + MTF1 chr1 38323381 - Exonic hg19 SARC TCGA-SI-AA8C-01A 4 16 Out-of-frame Intra-chr p34.2 p34.3 Transcription factor Seq+ 44793 ChimerSeq STARFusion TCGA_RNA-Seq ITPRIPL2-RN7SL2 ITPRIPL2 chr16 19131485 + RN7SL2 chr14 50329505 - Exonic hg19 SARC TCGA-SI-AA8C-01A 5 11 Out-of-frame Inter-chr p12.3 q21.3 44794 ChimerSeq STARFusion TCGA_RNA-Seq EXO5-MTF1 EXO5 chr1 40974549 + MTF1 chr1 38323381 - Exonic hg19 SARC TCGA-SI-AA8C-01A 2 16 Out-of-frame Intra-chr p34.2 p34.3 Transcription factor Seq+ 44795 ChimerSeq STARFusion TCGA_RNA-Seq ATP5L-ARCN1 ATP5L chr11 118272432 + ARCN1 chr11 118451961 + Exonic hg19 SARC TCGA-SI-AA8C-01A 2 10 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 44796 ChimerSeq STARFusion TCGA_RNA-Seq MBNL2-MADD MBNL2 chr13 97928663 + MADD chr11 47330142 + Exonic hg19 SARC TCGA-SI-AA8C-01A 2 10 In-Frame Inter-chr q32.1 Transcription factor p11.2 Tumor suppressor gene Seq+ 44797 ChimerSeq STARFusion TCGA_RNA-Seq GRIN2B-C12orf36 GRIN2B chr12 13768032 - C12orf36 chr12 13529227 - Exonic hg19 SARC TCGA-SI-AA8C-01A 3 5 Out-of-frame Intra-chr p13.1 44798 ChimerSeq STARFusion TCGA_RNA-Seq MIR143HG-PCYOX1L MIR143HG chr5 148803960 + PCYOX1L chr5 148743599 + Exonic hg19 SARC TCGA-JV-A5VE-01A 37 272 5'UTR-CDS Intra-chr q32 44799 ChimerSeq STARFusion TCGA_RNA-Seq MIR143HG-PCYOX1L MIR143HG chr5 148803807 + PCYOX1L chr5 148743599 + Exonic hg19 SARC TCGA-JV-A5VE-01A 22 272 5'UTR-CDS Intra-chr q32 44800 ChimerSeq STARFusion TCGA_RNA-Seq GLOD4-NPLOC4 GLOD4 chr17 673109 - NPLOC4 chr17 79589304 - Exonic hg19 SARC TCGA-JV-A5VE-01A 5 22 In-Frame Intra-chr p13.3 q25.3 Seq+ 44801 ChimerSeq STARFusion TCGA_RNA-Seq AEBP2-LMO3 AEBP2 chr12 19646920 + LMO3 chr12 16753802 - Exonic hg19 SARC TCGA-JV-A5VE-01A 4 18 In-Frame Intra-chr p12.3 Transcription factor p12.3 Seq+ 44802 ChimerSeq STARFusion TCGA_RNA-Seq LATS2-MYLK LATS2 chr13 21635485 - MYLK chr3 123386034 - Exonic hg19 SARC TCGA-K1-A42X-02A 20 140 5'UTR-CDS Inter-chr q12.11 AGC:NDR Tumor suppressor gene q21.1 Seq+ 44803 ChimerSeq STARFusion TCGA_RNA-Seq LATS2-MYLK LATS2 chr13 21634332 - MYLK chr3 123386033 - Exonic hg19 SARC TCGA-K1-A42X-02A 13 140 Out-of-frame Inter-chr q12.11 AGC:NDR Tumor suppressor gene q21.1 Seq+ 44804 ChimerSeq STARFusion TCGA_RNA-Seq ZNF236-QRSL1 ZNF236 chr18 74563895 + QRSL1 chr6 107088224 + Exonic hg19 SARC TCGA-K1-A42X-02A 17 63 In-Frame Inter-chr q23 Transcription factor q21 Seq+ 44805 ChimerSeq STARFusion TCGA_RNA-Seq TOPBP1-SPDEF TOPBP1 chr3 133341935 - SPDEF chr6 34512261 - Exonic hg19 SARC TCGA-K1-A42X-02A 13 43 CDS-5'UTR Inter-chr q22.1 p21.31 Transcription factor Seq+ 44806 ChimerSeq STARFusion TCGA_RNA-Seq SMAD3-AAGAB SMAD3 chr15 67358698 + AAGAB chr15 67496486 - Exonic hg19 SARC TCGA-K1-A42X-02A 3 62 Out-of-frame Intra-chr q22.33 Transcription factor q23 Seq+ 44807 ChimerSeq STARFusion TCGA_RNA-Seq ATRN-UQCRB ATRN chr20 3541552 + UQCRB chr8 97245455 - Exonic hg19 SARC TCGA-K1-A42X-02A 5 52 In-Frame Inter-chr p13 q22.1 Seq+ 44808 ChimerSeq STARFusion TCGA_RNA-Seq SMAD3-AAGAB SMAD3 chr15 67358698 + AAGAB chr15 67495236 - Exonic hg19 SARC TCGA-K1-A42X-02A 2 62 Out-of-frame Intra-chr q22.33 Transcription factor q23 Seq+ 44809 ChimerSeq STARFusion TCGA_RNA-Seq PALM2-PCP4 PALM2 chr9 112694308 + PCP4 chr21 41270401 + Exonic hg19 SARC TCGA-K1-A42X-02A 5 35 Out-of-frame Inter-chr q31.3 q22.2 Seq+ 44810 ChimerSeq STARFusion TCGA_RNA-Seq PALM2-PCP4 PALM2 chr9 112687362 + PCP4 chr21 41270401 + Exonic hg19 SARC TCGA-K1-A42X-02A 2 35 Out-of-frame Inter-chr q31.3 q22.2 Seq+ 44811 ChimerSeq STARFusion TCGA_RNA-Seq AKAP2-PCP4 AKAP2 chr9 112694308 + PCP4 chr21 41270401 + Exonic hg19 SARC TCGA-K1-A42X-02A 5 22 5'UTR-CDS Inter-chr q31.3 q22.2 44812 ChimerSeq STARFusion TCGA_RNA-Seq AKAP2-PCP4 AKAP2 chr9 112687362 + PCP4 chr21 41270401 + Exonic hg19 SARC TCGA-K1-A42X-02A 2 22 5'UTR-CDS Inter-chr q31.3 q22.2 44813 ChimerSeq STARFusion TCGA_RNA-Seq MYLK-IPPKP1 MYLK chr3 123375973 - IPPKP1 chr13 21677369 - Exonic hg19 SARC TCGA-K1-A42X-02A 3 14 Out-of-frame Inter-chr q21.1 q12.11 44814 ChimerSeq STARFusion TCGA_RNA-Seq AAGAB-SMAD3 AAGAB chr15 67500900 - SMAD3 chr15 67457233 + Exonic hg19 SARC TCGA-K1-A42X-02A 3 10 Out-of-frame Intra-chr q23 q22.33 Transcription factor Seq+ 44815 ChimerSeq STARFusion TCGA_RNA-Seq WRAP53-PITPNA WRAP53 chr17 7593019 + PITPNA chr17 1421325 - Exonic hg19 SARC TCGA-DX-A7EN-01A 3 14 CDS-3'UTR Intra-chr p13.1 p13.3 Seq+ 44816 ChimerSeq STARFusion TCGA_RNA-Seq MYOCD-ARHGAP44 MYOCD chr17 12664024 + ARHGAP44 chr17 12798257 + Exonic hg19 SARC TCGA-DX-A7EN-01A 2 10 Out-of-frame Intra-chr p12 p12 Seq+ 44817 ChimerSeq STARFusion TCGA_RNA-Seq C17orf49-STK39 C17orf49 chr17 6918475 + STK39 chr2 169018352 - Exonic hg19 SARC TCGA-DX-A7EN-01A 3 5 In-Frame Inter-chr p13.1 q24.3 Seq+ 44818 ChimerSeq STARFusion TCGA_RNA-Seq MAGT1-ATRX MAGT1 chrX 77150806 - ATRX chrX 76872198 - Exonic hg19 SARC TCGA-N1-A6IA-01A 20 102 In-Frame Intra-chr q21.1 q21.1 Oncogene 44819 ChimerSeq STARFusion TCGA_RNA-Seq RB1-MED4 RB1 chr13 48916850 + MED4 chr13 48664554 - Exonic hg19 SARC TCGA-N1-A6IA-01A 13 49 In-Frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Seq+ 44820 ChimerSeq STARFusion TCGA_RNA-Seq HELZ-OAZ1 HELZ chr17 65199435 - OAZ1 chr19 2272734 + Exonic hg19 SARC TCGA-N1-A6IA-01A 7 65 Out-of-frame Inter-chr q24.2 p13.3 Seq+ 44821 ChimerSeq STARFusion TCGA_RNA-Seq TNPO1-ZNF366 TNPO1 chr5 72157741 + ZNF366 chr5 71757337 - Exonic hg19 SARC TCGA-N1-A6IA-01A 10 32 CDS-5'UTR Intra-chr q13.2 q13.2 Tumor suppressor gene Transcription factor Seq+ 44822 ChimerSeq STARFusion TCGA_RNA-Seq TRIM13-DLEU1 TRIM13 chr13 50571899 + DLEU1 chr13 51205413 + Exonic hg19 SARC TCGA-N1-A6IA-01A 6 20 5'UTR-3'UTR Intra-chr q14.2 Tumor suppressor gene q14.2 Tumor suppressor gene 44823 ChimerSeq STARFusion TCGA_RNA-Seq GPATCH8-METTL16 GPATCH8 chr17 42512433 - METTL16 chr17 2381179 - Exonic hg19 SARC TCGA-N1-A6IA-01A 3 12 Out-of-frame Intra-chr q21.31 p13.3 Seq+ 44824 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-CYSTM1 ANKHD1 chr5 139828890 + CYSTM1 chr5 139661082 + Exonic hg19 SARC TCGA-N1-A6IA-01A 2 15 CDS-3'UTR Intra-chr q31.3 q31.3 44825 ChimerSeq STARFusion TCGA_RNA-Seq CPNE2-LINC00922 CPNE2 chr16 57126702 + LINC00922 chr16 65397711 - Exonic hg19 SARC TCGA-N1-A6IA-01A 3 3 Out-of-frame Intra-chr q13 q21 44826 ChimerSeq STARFusion TCGA_RNA-Seq MGAT4B-RNF130 MGAT4B chr5 179225165 - RNF130 chr5 179347426 - Exonic hg19 SARC TCGA-N1-A6IA-01A 2 7 CDS-3'UTR Intra-chr q35.3 Seq+ 44827 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-COL1A1 SEPT9 chr17 75471345 + COL1A1 chr17 48265510 - Exonic hg19 SARC TCGA-N1-A6IA-01A 3 3 5'UTR-CDS Intra-chr q21.33 Oncogene 44828 ChimerSeq STARFusion TCGA_RNA-Seq SMEK2-KYNU SMEK2 chr2 55842587 - KYNU chr2 143642918 + Exonic hg19 SARC TCGA-N1-A6IA-01A 2 4 CDS-5'UTR Intra-chr q22.2 Seq+ 44829 ChimerSeq STARFusion TCGA_RNA-Seq HCG18-TRIM26 HCG18 chr6 30294131 - TRIM26 chr6 30166930 - Exonic hg19 SARC TCGA-N1-A6IA-01A 2 1 3'UTR-5'UTR Intra-chr Seq+ 44830 ChimerSeq STARFusion TCGA_RNA-Seq SERPINE2-NLGN4X SERPINE2 chr2 224903816 - NLGN4X chrX 6069812 - Exonic hg19 SARC TCGA-N1-A6IA-01A 2 1 5'UTR-5'UTR Inter-chr q36.1 p22.31 44831 ChimerSeq STARFusion TCGA_RNA-Seq SC5D-SPA17 SC5D chr11 121163525 + SPA17 chr11 124545134 + Exonic hg19 SARC TCGA-QQ-A8VD-01A 183 174 Out-of-frame Intra-chr q23.3 q24.2 Seq+ 44832 ChimerSeq STARFusion TCGA_RNA-Seq TAB2-SIK2 TAB2 chr6 149719198 + SIK2 chr11 111600981 + Exonic hg19 SARC TCGA-QQ-A8VD-01A 56 432 CDS-3'UTR Inter-chr q25.1 q23.1 Seq+ 44833 ChimerSeq STARFusion TCGA_RNA-Seq TAB2-SIK2 TAB2 chr6 149719303 + SIK2 chr11 111600004 + Exonic hg19 SARC TCGA-QQ-A8VD-01A 25 431 Out-of-frame Inter-chr q25.1 q23.1 Seq+ 44834 ChimerSeq STARFusion TCGA_RNA-Seq TRIM27-PTPRR TRIM27 chr6 28879473 - PTPRR chr12 71050597 - Exonic hg19 SARC TCGA-QQ-A8VD-01A 31 121 In-Frame Inter-chr q15 Seq+ 44835 ChimerSeq STARFusion TCGA_RNA-Seq TMBIM4-PBX3 TMBIM4 chr12 66563635 - PBX3 chr9 128691934 + Exonic hg19 SARC TCGA-QQ-A8VD-01A 4 114 Out-of-frame Inter-chr q14.3 q33.3 Transcription factor Seq+ 44836 ChimerSeq STARFusion TCGA_RNA-Seq TMBIM4-PBX3 TMBIM4 chr12 66563635 - PBX3 chr9 128691934 + Exonic hg19 SARC TCGA-QQ-A8VD-01A 4 112 Out-of-frame Inter-chr q14.3 q33.3 Transcription factor Seq+ 44837 ChimerSeq STARFusion TCGA_RNA-Seq TMBIM4-PBX3 TMBIM4 chr12 66563635 - PBX3 chr9 128677965 + Exonic hg19 SARC TCGA-QQ-A8VD-01A 3 114 In-Frame Inter-chr q14.3 q33.3 Transcription factor Seq+ 44838 ChimerSeq STARFusion TCGA_RNA-Seq TMBIM4-PBX3 TMBIM4 chr12 66563635 - PBX3 chr9 128677965 + Exonic hg19 SARC TCGA-QQ-A8VD-01A 3 112 In-Frame Inter-chr q14.3 q33.3 Transcription factor Seq+ 44839 ChimerSeq STARFusion TCGA_RNA-Seq CIZ1-SWI5 CIZ1 chr9 130947826 - SWI5 chr9 131046789 + Exonic hg19 SARC TCGA-QQ-A8VD-01A 4 38 In-Frame Intra-chr q34.11 Tumor suppressor gene q34.11 Seq+ 44840 ChimerSeq STARFusion TCGA_RNA-Seq RAB6A-MICA RAB6A chr11 73441810 - MICA chr6 31378320 + Exonic hg19 SARC TCGA-QQ-A8VD-01A 4 27 Out-of-frame Inter-chr q13.4 p21.33 Seq+ 44841 ChimerSeq STARFusion TCGA_RNA-Seq ARFGEF1-CCDC94 ARFGEF1 chr8 68123718 - CCDC94 chr19 4261991 + Exonic hg19 SARC TCGA-QQ-A8VD-01A 6 11 Out-of-frame Inter-chr q13.2 p13.3 Seq+ 44842 ChimerSeq STARFusion TCGA_RNA-Seq RSPH3-NOTCH4 RSPH3 chr6 159420467 - NOTCH4 chr6 32171659 - Exonic hg19 SARC TCGA-QQ-A8VD-01A 5 14 Out-of-frame Intra-chr q25.3 Oncogene Seq+ 44843 ChimerSeq STARFusion TCGA_RNA-Seq SWI5-ATG16L2 SWI5 chr9 131048312 + ATG16L2 chr11 72553662 + Exonic hg19 SARC TCGA-QQ-A8VD-01A 4 16 CDS-3'UTR Inter-chr q34.11 q13.4 Seq+ 44844 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-FRS2 CTDSP2 chr12 58240155 - FRS2 chr12 69924645 + Exonic hg19 SARC TCGA-QQ-A8VD-01A 5 6 CDS-5'UTR Intra-chr q14.1 q15 Seq+ 44845 ChimerSeq STARFusion TCGA_RNA-Seq SASH1-POLR3A SASH1 chr6 148761543 + POLR3A chr10 79740031 - Exonic hg19 SARC TCGA-QQ-A8VD-01A 6 1 Out-of-frame Inter-chr q24.3 Tumor suppressor gene q22.3 Seq+ 44846 ChimerSeq STARFusion TCGA_RNA-Seq PAAF1-NCR3 PAAF1 chr11 73588113 + NCR3 chr6 31557676 - Exonic hg19 SARC TCGA-QQ-A8VD-01A 3 12 Out-of-frame Inter-chr q13.4 Seq+ 44847 ChimerSeq STARFusion TCGA_RNA-Seq UST-FOXP2 UST chr6 149068813 + FOXP2 chr7 114174672 + Exonic hg19 SARC TCGA-QQ-A8VD-01A 3 6 Out-of-frame Inter-chr q25.1 q31.1 Transcription factor Seq+ 44848 ChimerSeq STARFusion TCGA_RNA-Seq COL1A1-IGF2 COL1A1 chr17 48264442 - IGF2 chr11 2150808 - Exonic hg19 SARC TCGA-QQ-A8VD-01A 3 5 Out-of-frame Inter-chr q21.33 Oncogene p15.5 Oncogene 44849 ChimerSeq STARFusion TCGA_RNA-Seq SRGAP1-PTPRR SRGAP1 chr12 64238663 + PTPRR chr12 71158558 - Exonic hg19 SARC TCGA-QQ-A8VD-01A 2 9 Out-of-frame Intra-chr q14.2 q15 Seq+ 44850 ChimerSeq STARFusion TCGA_RNA-Seq FOXP2-TRIM49C FOXP2 chr7 113803143 + TRIM49C chr11 89804864 + Exonic hg19 SARC TCGA-QQ-A8VD-01A 2 8 Out-of-frame Inter-chr q31.1 Transcription factor q14.3 44851 ChimerSeq STARFusion TCGA_RNA-Seq HECTD4-YAP1 HECTD4 chr12 112819756 - YAP1 chr11 102076624 + Exonic hg19 SARC TCGA-QQ-A8VD-01A 2 6 Out-of-frame Inter-chr q24.13 q22.1 Tumor suppressor gene Seq+ 44852 ChimerSeq STARFusion TCGA_RNA-Seq ANGPT1-TNFRSF11B ANGPT1 chr8 108509490 - TNFRSF11B chr8 119945539 - Exonic hg19 SARC TCGA-DX-AB2G-01A 32 116 In-Frame Intra-chr q23.1 q24.12 Seq+ 44853 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1432-KDM4C KIAA1432 chr9 5656690 + KDM4C chr9 7128066 + Exonic hg19 SARC TCGA-DX-AB2G-01A 3 19 In-Frame Intra-chr p24.1 Seq+ 44854 ChimerSeq STARFusion TCGA_RNA-Seq PLEC-JPH1 PLEC chr8 145012319 - JPH1 chr8 75171738 - Exonic hg19 SARC TCGA-DX-AB2G-01A 4 12 Out-of-frame Intra-chr q24.3 q21.11 Seq+ 44855 ChimerSeq STARFusion TCGA_RNA-Seq MLLT3-BNC2 MLLT3 chr9 20620653 - BNC2 chr9 16437522 - Exonic hg19 SARC TCGA-DX-AB2G-01A 4 6 Out-of-frame Intra-chr p21.3 p22.2 Transcription factor Seq+ 44856 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF1-REXO4 RAPGEF1 chr9 134615157 - REXO4 chr9 136278041 - Exonic hg19 SARC TCGA-DX-AB2G-01A 4 6 5'UTR-CDS Intra-chr q34.13 Transcription factor Seq+ 44857 ChimerSeq STARFusion TCGA_RNA-Seq MIR143HG-PCYOX1L MIR143HG chr5 148803960 + PCYOX1L chr5 148743599 + Exonic hg19 SARC TCGA-DX-AB36-01A 36 269 5'UTR-CDS Intra-chr q32 44858 ChimerSeq STARFusion TCGA_RNA-Seq MIR143HG-PCYOX1L MIR143HG chr5 148803807 + PCYOX1L chr5 148743599 + Exonic hg19 SARC TCGA-DX-AB36-01A 23 269 5'UTR-CDS Intra-chr q32 44859 ChimerSeq STARFusion TCGA_RNA-Seq GLOD4-NPLOC4 GLOD4 chr17 673109 - NPLOC4 chr17 79589304 - Exonic hg19 SARC TCGA-DX-AB36-01A 5 22 In-Frame Intra-chr p13.3 q25.3 Seq+ 44860 ChimerSeq STARFusion TCGA_RNA-Seq AEBP2-LMO3 AEBP2 chr12 19646920 + LMO3 chr12 16753802 - Exonic hg19 SARC TCGA-DX-AB36-01A 4 18 In-Frame Intra-chr p12.3 Transcription factor p12.3 Seq+ 44861 ChimerSeq STARFusion TCGA_RNA-Seq PSMF1-CHST8 PSMF1 chr20 1106293 + CHST8 chr19 34180082 + Exonic hg19 SARC TCGA-DX-A8BM-01A 19 47 CDS-5'UTR Inter-chr p13 q13.11 Seq+ 44862 ChimerSeq STARFusion TCGA_RNA-Seq KMT2E-MAP2K3 KMT2E chr7 104715262 + MAP2K3 chr17 21215454 + Exonic hg19 SARC TCGA-DX-A8BM-01A 8 7 Out-of-frame Inter-chr q22.3 p11.2 STE:STE7 44863 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP24-MAPK10 ARHGAP24 chr4 86863426 + MAPK10 chr4 86938523 - Exonic hg19 SARC TCGA-DX-A8BM-01A 3 18 Out-of-frame Intra-chr q21.23 q21.3 Tumor suppressor gene Seq+ 44864 ChimerSeq STARFusion TCGA_RNA-Seq MAP2K3-FAM133B MAP2K3 chr17 21216849 + FAM133B chr7 92207031 - Exonic hg19 SARC TCGA-DX-A8BM-01A 3 16 In-Frame Inter-chr p11.2 STE:STE7 q21.2 44865 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP24-MAPK10 ARHGAP24 chr4 86863426 + MAPK10 chr4 86938528 - Exonic hg19 SARC TCGA-DX-A8BM-01A 2 18 Out-of-frame Intra-chr q21.23 q21.3 Tumor suppressor gene Seq+ 44866 ChimerSeq STARFusion TCGA_RNA-Seq LRP5L-SGSM3 LRP5L chr22 25771780 - SGSM3 chr22 40796700 + Exonic hg19 SARC TCGA-DX-A8BM-01A 3 13 5'UTR-5'UTR Intra-chr q11.23 q13.1 Seq+ 44867 ChimerSeq STARFusion TCGA_RNA-Seq NLK-KLHL2P1 NLK chr17 26370357 + KLHL2P1 chr4 120255483 + Exonic hg19 SARC TCGA-DX-A8BM-01A 3 11 Out-of-frame Inter-chr q11.2 CMGC:MAPK q26 44868 ChimerSeq STARFusion TCGA_RNA-Seq MTMR3-LRP5L MTMR3 chr22 30362595 + LRP5L chr22 25756937 - Exonic hg19 SARC TCGA-DX-A8BM-01A 3 9 Out-of-frame Intra-chr q12.2 q11.23 44869 ChimerSeq STARFusion TCGA_RNA-Seq MPZL1-TNFSF4 MPZL1 chr1 167745403 + TNFSF4 chr1 173157708 - Exonic hg19 SARC TCGA-DX-A2J0-01A 16 175 In-Frame Intra-chr q24.2 q25.1 Seq+ 44870 ChimerSeq STARFusion TCGA_RNA-Seq C21orf91-COLGALT2 C21orf91 chr21 19190509 - COLGALT2 chr1 183914698 - Exonic hg19 SARC TCGA-DX-A2J0-01A 11 104 Out-of-frame Inter-chr q21.1 q25.3 Seq+ 44871 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-MYF6 CPSF6 chr12 69633486 + MYF6 chr12 81101634 + Exonic hg19 SARC TCGA-DX-A2J0-01A 10 40 Out-of-frame Intra-chr q15 q21.31 Transcription factor Seq+ 44872 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-RCSD1 TSFM chr12 58177066 + RCSD1 chr1 167599480 + Exonic hg19 SARC TCGA-DX-A2J0-01A 5 50 CDS-5'UTR Inter-chr q14.1 q24.2 Seq+ 44873 ChimerSeq STARFusion TCGA_RNA-Seq METTL25-GALNT9 METTL25 chr12 82796909 + GALNT9 chr12 132863016 - Exonic hg19 SARC TCGA-DX-A2J0-01A 7 37 Out-of-frame Intra-chr q21.31 q24.33 Seq+ 44874 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-RCSD1 TSFM chr12 58177066 + RCSD1 chr1 167653137 + Exonic hg19 SARC TCGA-DX-A2J0-01A 3 50 In-Frame Inter-chr q14.1 q24.2 Seq+ 44875 ChimerSeq STARFusion TCGA_RNA-Seq TRIO-TERT TRIO chr5 14406781 + TERT chr5 1282739 - Exonic hg19 SARC TCGA-DX-A2J0-01A 7 33 Out-of-frame Intra-chr p15.2 p15.33 Oncogene Seq+ 44876 ChimerSeq STARFusion TCGA_RNA-Seq ELK3-CDK17 ELK3 chr12 96617551 + CDK17 chr12 96694138 - Exonic hg19 SARC TCGA-DX-A2J0-01A 5 24 In-Frame Intra-chr q23.1 Transcription factor q23.1 Seq+ 44877 ChimerSeq STARFusion TCGA_RNA-Seq TBX15-FMN2 TBX15 chr1 119530214 - FMN2 chr1 240421245 + Exonic hg19 SARC TCGA-DX-A2J0-01A 6 17 5'UTR-CDS Intra-chr p12 Transcription factor q43 Seq+ 44878 ChimerSeq STARFusion TCGA_RNA-Seq TRIO-TERT TRIO chr5 14406781 + TERT chr5 1268748 - Exonic hg19 SARC TCGA-DX-A2J0-01A 2 33 Out-of-frame Intra-chr p15.2 p15.33 Oncogene Seq+ 44879 ChimerSeq STARFusion TCGA_RNA-Seq MAGI3-MROH3P MAGI3 chr1 114133280 + MROH3P chr1 200917220 + Exonic hg19 SARC TCGA-DX-A2J0-01A 5 14 Out-of-frame Intra-chr p13.2 q32.1 Seq+ 44880 ChimerSeq STARFusion TCGA_RNA-Seq TMBIM4-NAV3 TMBIM4 chr12 66563635 - NAV3 chr12 78520947 + Exonic hg19 SARC TCGA-DX-A2J0-01A 3 19 Out-of-frame Intra-chr q14.3 q21.2 Seq+ 44881 ChimerSeq STARFusion TCGA_RNA-Seq TMBIM4-NAV3 TMBIM4 chr12 66563635 - NAV3 chr12 78520947 + Exonic hg19 SARC TCGA-DX-A2J0-01A 3 19 Out-of-frame Intra-chr q14.3 q21.2 Seq+ 44882 ChimerSeq STARFusion TCGA_RNA-Seq CD244-DDR2 CD244 chr1 160808241 - DDR2 chr1 162711369 + Exonic hg19 SARC TCGA-DX-A2J0-01A 3 14 Out-of-frame Intra-chr q23.3 q23.3 TK:DDR Oncogene Tumor suppressor gene Seq+ 44883 ChimerSeq STARFusion TCGA_RNA-Seq TBX15-MAGI3 TBX15 chr1 119530214 - MAGI3 chr1 114123164 + Exonic hg19 SARC TCGA-DX-A2J0-01A 2 14 5'UTR-CDS Intra-chr p12 Transcription factor p13.2 Seq+ 44884 ChimerSeq STARFusion TCGA_RNA-Seq BROX-SUSD4 BROX chr1 222886284 + SUSD4 chr1 223532463 - Exonic hg19 SARC TCGA-DX-A2J0-01A 2 13 5'UTR-CDS Intra-chr q41 q41 Seq+ 44885 ChimerSeq STARFusion TCGA_RNA-Seq SUCO-LIN7A SUCO chr1 172502637 + LIN7A chr12 81205462 - Exonic hg19 SARC TCGA-DX-A2J0-01A 3 6 Out-of-frame Inter-chr q24.3 q21.31 Seq+ 44886 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC17-NAV3 ZDHHC17 chr12 77158109 + NAV3 chr12 78540149 + Exonic hg19 SARC TCGA-DX-A2J0-01A 2 7 In-Frame Intra-chr q21.2 q21.2 Seq+ 44887 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-BLMH TAOK1 chr17 27829741 + BLMH chr17 28576186 - Exonic hg19 SARC TCGA-DX-A2J0-01A 3 1 Out-of-frame Intra-chr q11.2 q11.2 44888 ChimerSeq STARFusion TCGA_RNA-Seq CHRM3-SLC19A2 CHRM3 chr1 239882199 + SLC19A2 chr1 169446995 - Exonic hg19 SARC TCGA-DX-A2J0-01A 2 3 5'UTR-CDS Intra-chr q43 q24.2 44889 ChimerSeq STARFusion TCGA_RNA-Seq SRGAP2B-VPS45 SRGAP2B chr1 143916308 + VPS45 chr1 150082611 + Exonic hg19 SARC TCGA-DX-A2J0-01A 2 1 Out-of-frame Intra-chr q21.1 q21.2 44890 ChimerSeq STARFusion TCGA_RNA-Seq ZNF606-DYNLT1 ZNF606 chr19 58511176 - DYNLT1 chr6 159062392 - Exonic hg19 SARC TCGA-DX-A2J0-01A 2 1 In-Frame Inter-chr q13.43 Transcription factor q25.3 44891 ChimerSeq STARFusion TCGA_RNA-Seq MAX-ACTN1 MAX chr14 65560426 - ACTN1 chr14 69392389 - Exonic hg19 SARC TCGA-DX-AB2O-01A 72 486 In-Frame Intra-chr q23.3 Oncogene Tumor suppressor gene Transcription factor q24.1 Seq+ 44892 ChimerSeq STARFusion TCGA_RNA-Seq KIRREL-CD1C KIRREL chr1 157963518 + CD1C chr1 158260924 + Exonic hg19 SARC TCGA-DX-AB2O-01A 24 115 In-Frame Intra-chr q23.1 q23.1 Seq+ 44893 ChimerSeq STARFusion TCGA_RNA-Seq CDK17-ELK3 CDK17 chr12 96793764 - ELK3 chr12 96617343 + Exonic hg19 SARC TCGA-DX-AB2O-01A 10 47 5'UTR-5'UTR Intra-chr q23.1 q23.1 Transcription factor 44894 ChimerSeq STARFusion TCGA_RNA-Seq RGL1-NMNAT2 RGL1 chr1 183605636 + NMNAT2 chr1 183247764 - Exonic hg19 SARC TCGA-DX-AB2O-01A 9 28 5'UTR-CDS Intra-chr q25.3 q25.3 Seq+ 44895 ChimerSeq STARFusion TCGA_RNA-Seq LY96-GDAP1 LY96 chr8 74903789 + GDAP1 chr8 75400913 + Exonic hg19 SARC TCGA-DX-AB2O-01A 7 34 CDS-3'UTR Intra-chr q21.11 q21.11 Seq+ 44896 ChimerSeq STARFusion TCGA_RNA-Seq RGL1-NMNAT2 RGL1 chr1 183605636 + NMNAT2 chr1 183230438 - Exonic hg19 SARC TCGA-DX-AB2O-01A 4 28 5'UTR-CDS Intra-chr q25.3 q25.3 Seq+ 44897 ChimerSeq STARFusion TCGA_RNA-Seq KIRREL-CD1A KIRREL chr1 157963518 + CD1A chr1 158226576 + Exonic hg19 SARC TCGA-DX-AB2O-01A 2 30 In-Frame Intra-chr q23.1 q23.1 Seq+ 44898 ChimerSeq STARFusion TCGA_RNA-Seq KIF26A-CEP170B KIF26A chr14 104605625 + CEP170B chr14 105359860 + Exonic hg19 SARC TCGA-DX-AB2O-01A 5 17 Out-of-frame Intra-chr q32.33 q32.33 Seq+ 44899 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF11-SHC1 ARHGEF11 chr1 157014091 - SHC1 chr1 154942675 - Exonic hg19 SARC TCGA-DX-AB2O-01A 2 5 CDS-5'UTR Intra-chr q23.1 q21.3 Seq+ 44900 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-TMTC2 FRS2 chr12 69925836 + TMTC2 chr12 83379704 + Exonic hg19 SARC TCGA-FX-A2QS-01A 174 475 5'UTR-CDS Intra-chr q15 q21.31 Seq+ 44901 ChimerSeq STARFusion TCGA_RNA-Seq RASSF3-STK10 RASSF3 chr12 65004523 + STK10 chr5 171491816 - Exonic hg19 SARC TCGA-FX-A2QS-01A 98 346 In-Frame Inter-chr q14.2 Tumor suppressor gene q35.1 Tumor suppressor gene Seq+ 44902 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-COL9A1 CPSF6 chr12 69633486 + COL9A1 chr6 70926784 - Exonic hg19 SARC TCGA-FX-A2QS-01A 24 534 Out-of-frame Inter-chr q15 q13 Seq+ 44903 ChimerSeq STARFusion TCGA_RNA-Seq ETS1-UBE2V2 ETS1 chr11 128391808 - UBE2V2 chr8 48955593 + Exonic hg19 SARC TCGA-FX-A2QS-01A 25 337 In-Frame Inter-chr q24.3 Oncogene Transcription factor q11.21 Seq+ 44904 ChimerSeq STARFusion TCGA_RNA-Seq ETS1-UBE2V2 ETS1 chr11 128391808 - UBE2V2 chr8 48962413 + Exonic hg19 SARC TCGA-FX-A2QS-01A 4 337 Out-of-frame Inter-chr q24.3 Oncogene Transcription factor q11.21 Seq+ 44905 ChimerSeq STARFusion TCGA_RNA-Seq KCNN3-YEATS4 KCNN3 chr1 154705479 - YEATS4 chr12 69756568 + Exonic hg19 SARC TCGA-FX-A2QS-01A 26 129 In-Frame Inter-chr q21.3 q15 Seq+ 44906 ChimerSeq STARFusion TCGA_RNA-Seq DAP-SEMA5A DAP chr5 10761126 - SEMA5A chr5 9066758 - Exonic hg19 SARC TCGA-FX-A2QS-01A 22 90 Out-of-frame Intra-chr p15.2 p15.31 Seq+ 44907 ChimerSeq STARFusion TCGA_RNA-Seq SEMA5A-SLC6A19 SEMA5A chr5 9066533 - SLC6A19 chr5 1208861 + Exonic hg19 SARC TCGA-FX-A2QS-01A 14 111 In-Frame Intra-chr p15.31 p15.33 Seq+ 44908 ChimerSeq STARFusion TCGA_RNA-Seq JAZF1-EVX1 JAZF1 chr7 28220082 - EVX1 chr7 27284667 + Exonic hg19 SARC TCGA-FX-A2QS-01A 18 64 In-Frame Intra-chr p15.1 Transcription factor p15.2 Transcription factor Seq+ 44909 ChimerSeq STARFusion TCGA_RNA-Seq ACVR2A-SUMO1 ACVR2A chr2 148680680 + SUMO1 chr2 203072044 - Exonic hg19 SARC TCGA-FX-A2QS-01A 18 61 Out-of-frame Intra-chr q22.3 Oncogene q33.1 Seq+ 44910 ChimerSeq STARFusion TCGA_RNA-Seq NAV3-EVX1 NAV3 chr12 78225484 + EVX1 chr7 27284667 + Exonic hg19 SARC TCGA-FX-A2QS-01A 20 49 Out-of-frame Inter-chr q21.2 p15.2 Transcription factor Seq+ 44911 ChimerSeq STARFusion TCGA_RNA-Seq DCAF6-YEATS4 DCAF6 chr1 168014465 + YEATS4 chr12 69783927 + Exonic hg19 SARC TCGA-FX-A2QS-01A 21 42 Out-of-frame Inter-chr q24.2 q15 Seq+ 44912 ChimerSeq STARFusion TCGA_RNA-Seq ACSS1-KRT18P2 ACSS1 chr20 25028721 - KRT18P2 chr21 21798484 - Exonic hg19 SARC TCGA-FX-A2QS-01A 12 63 Out-of-frame Inter-chr p11.21 q21.1 44913 ChimerSeq STARFusion TCGA_RNA-Seq PTPRR-NAV3 PTPRR chr12 71077907 - NAV3 chr12 78360009 + Exonic hg19 SARC TCGA-FX-A2QS-01A 17 40 In-Frame Intra-chr q15 q21.2 Seq+ 44914 ChimerSeq STARFusion TCGA_RNA-Seq DCAF6-HMCN1 DCAF6 chr1 168014465 + HMCN1 chr1 185815158 + Exonic hg19 SARC TCGA-FX-A2QS-01A 11 59 Out-of-frame Intra-chr q24.2 q25.3 Seq+ 44915 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA2-OTOGL PPFIA2 chr12 82147752 - OTOGL chr12 80690607 + Exonic hg19 SARC TCGA-FX-A2QS-01A 6 77 In-Frame Intra-chr q21.31 q21.31 Seq+ 44916 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA2-OTOGL PPFIA2 chr12 82147752 - OTOGL chr12 80696414 + Exonic hg19 SARC TCGA-FX-A2QS-01A 6 77 In-Frame Intra-chr q21.31 q21.31 Seq+ 44917 ChimerSeq STARFusion TCGA_RNA-Seq ANO4-C12orf66 ANO4 chr12 101111325 + C12orf66 chr12 64609743 - Exonic hg19 SARC TCGA-FX-A2QS-01A 19 10 5'UTR-CDS Intra-chr q23.1 q14.2 Seq+ 44918 ChimerSeq STARFusion TCGA_RNA-Seq NDUFS2-SLC24A2 NDUFS2 chr1 161172270 + SLC24A2 chr9 19597277 - Exonic hg19 SARC TCGA-FX-A2QS-01A 9 34 Out-of-frame Inter-chr q23.3 p22.1 Seq+ 44919 ChimerSeq STARFusion TCGA_RNA-Seq ABCA9-TANC2 ABCA9 chr17 66978703 - TANC2 chr17 61345109 + Exonic hg19 SARC TCGA-FX-A2QS-01A 6 43 In-Frame Intra-chr q24.2 q23.2 Seq+ 44920 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB44-FRS2 ZBTB44 chr11 130184270 - FRS2 chr12 69955960 + Exonic hg19 SARC TCGA-FX-A2QS-01A 13 9 5'UTR-5'UTR Inter-chr q24.3 Transcription factor q15 Seq+ 44921 ChimerSeq STARFusion TCGA_RNA-Seq C12orf66-CPM C12orf66 chr12 64609458 - CPM chr12 69351458 - Exonic hg19 SARC TCGA-FX-A2QS-01A 7 29 CDS-5'UTR Intra-chr q14.2 q15 Seq+ 44922 ChimerSeq STARFusion TCGA_RNA-Seq BCL9-BEST3 BCL9 chr1 147013444 + BEST3 chr12 70049593 - Exonic hg19 SARC TCGA-FX-A2QS-01A 8 19 5'UTR-CDS Inter-chr q21.2 Oncogene q15 Seq+ 44923 ChimerSeq STARFusion TCGA_RNA-Seq FXN-FPR2 FXN chr9 71679951 + FPR2 chr19 52263285 + Exonic hg19 SARC TCGA-FX-A2QS-01A 7 23 CDS-5'UTR Inter-chr q21.11 Tumor suppressor gene q13.41 Seq+ 44924 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT3-ERO1LB B4GALT3 chr1 161143395 - ERO1LB chr1 236406795 - Exonic hg19 SARC TCGA-FX-A2QS-01A 8 18 In-Frame Intra-chr q23.3 Seq+ 44925 ChimerSeq STARFusion TCGA_RNA-Seq TMEM255A-FPR2 TMEM255A chrX 119438204 - FPR2 chr19 52263285 + Exonic hg19 SARC TCGA-FX-A2QS-01A 4 29 Out-of-frame Inter-chr q24 q13.41 Seq+ 44926 ChimerSeq STARFusion TCGA_RNA-Seq TNS3-ALG13 TNS3 chr7 47621649 - ALG13 chrX 110925360 + Exonic hg19 SARC TCGA-FX-A2QS-01A 10 5 5'UTR-5'UTR Inter-chr p12.3 q23 Seq+ 44927 ChimerSeq STARFusion TCGA_RNA-Seq ZNF146-ABCA9 ZNF146 chr19 36709097 + ABCA9 chr17 66992155 - Exonic hg19 SARC TCGA-FX-A2QS-01A 3 30 5'UTR-CDS Inter-chr q13.12 Transcription factor q24.2 Seq+ 44928 ChimerSeq STARFusion TCGA_RNA-Seq CLK2-MARS CLK2 chr1 155238084 - MARS chr12 57881813 + Exonic hg19 SARC TCGA-FX-A2QS-01A 5 21 CDS-5'UTR Inter-chr q22 CMGC:CLK q13.3 Seq+ 44929 ChimerSeq STARFusion TCGA_RNA-Seq ZNF665-RANBP3L ZNF665 chr19 53678698 - RANBP3L chr5 36271413 - Exonic hg19 SARC TCGA-FX-A2QS-01A 2 31 In-Frame Inter-chr q13.42 Transcription factor p13.2 Seq+ 44930 ChimerSeq STARFusion TCGA_RNA-Seq OTOGL-HMGA2 OTOGL chr12 80699475 + HMGA2 chr12 66221781 + Exonic hg19 SARC TCGA-FX-A2QS-01A 4 22 In-Frame Intra-chr q21.31 q14.3 Transcription factor Seq+ 44931 ChimerSeq STARFusion TCGA_RNA-Seq TMEM255A-FPR2 TMEM255A chrX 119438204 - FPR2 chr19 52271898 + Exonic hg19 SARC TCGA-FX-A2QS-01A 2 29 Out-of-frame Inter-chr q24 q13.41 Seq+ 44932 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-NOS1AP SLC7A5 chr16 87902491 - NOS1AP chr1 162124195 + Exonic hg19 SARC TCGA-FX-A2QS-01A 8 4 Out-of-frame Inter-chr q24.2 q23.3 Seq+ 44933 ChimerSeq STARFusion TCGA_RNA-Seq CD2AP-MGAT4C CD2AP chr6 47522502 + MGAT4C chr12 87232657 - Exonic hg19 SARC TCGA-FX-A2QS-01A 4 16 CDS-5'UTR Inter-chr p12.3 Seq+ 44934 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-GDF15 DNM2 chr19 10829079 + GDF15 chr19 18493160 + Exonic hg19 SARC TCGA-FX-A2QS-01A 2 23 CDS-5'UTR Intra-chr p13.2 p13.11 Seq+ 44935 ChimerSeq STARFusion TCGA_RNA-Seq RNF216-ABCB5 RNF216 chr7 5751392 - ABCB5 chr7 20662888 + Exonic hg19 SARC TCGA-FX-A2QS-01A 3 18 CDS-5'UTR Intra-chr p22.1 p21.1 Seq+ 44936 ChimerSeq STARFusion TCGA_RNA-Seq FAM65C-TMEM189 FAM65C chr20 49307663 - TMEM189 chr20 48760158 - Exonic hg19 SARC TCGA-FX-A2QS-01A 5 9 5'UTR-CDS Intra-chr q13.13 Seq+ 44937 ChimerSeq STARFusion TCGA_RNA-Seq MB21D2-CTLA4 MB21D2 chr3 192635419 - CTLA4 chr2 204735309 + Exonic hg19 SARC TCGA-FX-A2QS-01A 3 14 In-Frame Inter-chr q29 q33.2 Seq+ 44938 ChimerSeq STARFusion TCGA_RNA-Seq SLIT3-TBC1D30 SLIT3 chr5 168620483 - TBC1D30 chr12 65258448 + Exonic hg19 SARC TCGA-FX-A2QS-01A 4 10 Out-of-frame Inter-chr q35.1 q14.3 Seq+ 44939 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-ARHGEF12 TANC2 chr17 61151375 + ARHGEF12 chr11 120317112 + Exonic hg19 SARC TCGA-FX-A2QS-01A 3 13 In-Frame Inter-chr q23.2 q23.3 Tumor suppressor gene Seq+ 44940 ChimerSeq STARFusion TCGA_RNA-Seq TRERF1-HYDIN TRERF1 chr6 42418915 - HYDIN chr16 70975722 - Exonic hg19 SARC TCGA-FX-A2QS-01A 2 16 5'UTR-CDS Inter-chr p21.1 Transcription factor Seq+ 44941 ChimerSeq STARFusion TCGA_RNA-Seq SLIT3-KCNMB4 SLIT3 chr5 168671709 - KCNMB4 chr12 70792509 + Exonic hg19 SARC TCGA-FX-A2QS-01A 5 3 Out-of-frame Inter-chr q35.1 q15 Seq+ 44942 ChimerSeq STARFusion TCGA_RNA-Seq TNS3-ALG13 TNS3 chr7 47621649 - ALG13 chrX 110925464 + Exonic hg19 SARC TCGA-FX-A2QS-01A 4 5 5'UTR-5'UTR Inter-chr p12.3 q23 Seq+ 44943 ChimerSeq STARFusion TCGA_RNA-Seq METTL25-GTPBP10 METTL25 chr12 82752603 + GTPBP10 chr7 90001469 + Exonic hg19 SARC TCGA-FX-A2QS-01A 3 7 Out-of-frame Inter-chr q21.31 q21.13 Seq+ 44944 ChimerSeq STARFusion TCGA_RNA-Seq ETV1-BTBD9 ETV1 chr7 13971127 - BTBD9 chr6 38224292 - Exonic hg19 SARC TCGA-FX-A2QS-01A 2 9 Out-of-frame Inter-chr p21.2 Oncogene Transcription factor p21.2 Seq+ 44945 ChimerSeq STARFusion TCGA_RNA-Seq SMC2-TENM1 SMC2 chr9 106882443 + TENM1 chrX 124097666 - Exonic hg19 SARC TCGA-FX-A2QS-01A 2 6 Out-of-frame Inter-chr q31.1 q25 Seq+ 44946 ChimerSeq STARFusion TCGA_RNA-Seq ANO6-MSRB3 ANO6 chr12 45761576 + MSRB3 chr12 65847508 + Exonic hg19 SARC TCGA-FX-A2QS-01A 3 1 Out-of-frame Intra-chr q12 q14.3 Seq+ 44947 ChimerSeq STARFusion TCGA_RNA-Seq N4BP1-GPATCH2 N4BP1 chr16 48643686 - GPATCH2 chr1 217793841 - Exonic hg19 SARC TCGA-FX-A2QS-01A 2 3 Out-of-frame Inter-chr q12.1 q41 Seq+ 44948 ChimerSeq STARFusion TCGA_RNA-Seq MPDU1-DNAH9 MPDU1 chr17 7487283 + DNAH9 chr17 11790142 + Exonic hg19 SARC TCGA-X6-A8C4-01A 6 39 Out-of-frame Intra-chr p13.1 p12 Seq+ 44949 ChimerSeq STARFusion TCGA_RNA-Seq GALNT11-PTPRN2 GALNT11 chr7 151722969 + PTPRN2 chr7 158282477 - Exonic hg19 SARC TCGA-X6-A8C4-01A 2 10 5'UTR-CDS Intra-chr q36.1 q36.3 Seq+ 44950 ChimerSeq STARFusion TCGA_RNA-Seq TUBGCP6-TCF7L1 TUBGCP6 chr22 50667833 - TCF7L1 chr2 85529607 + Exonic hg19 SARC TCGA-X6-A8C4-01A 2 6 In-Frame Inter-chr q13.33 p11.2 Oncogene Transcription factor Seq+ 44951 ChimerSeq STARFusion TCGA_RNA-Seq MEF2A-CHSY1 MEF2A chr15 100211659 + CHSY1 chr15 101719185 - Exonic hg19 SARC TCGA-X6-A8C4-01A 2 4 In-Frame Intra-chr q26.3 Transcription factor q26.3 44952 ChimerSeq STARFusion TCGA_RNA-Seq MEF2A-CHSY1 MEF2A chr15 100211862 + CHSY1 chr15 101728424 - Exonic hg19 SARC TCGA-X6-A8C4-01A 2 4 Out-of-frame Intra-chr q26.3 Transcription factor q26.3 44953 ChimerSeq STARFusion TCGA_RNA-Seq RAB21-CRADD RAB21 chr12 72176438 + CRADD chr12 94253095 + Exonic hg19 SARC TCGA-X6-A8C4-01A 2 4 CDS-3'UTR Intra-chr q21.1 q22 Seq+ 44954 ChimerSeq STARFusion TCGA_RNA-Seq DLG1-CBFA2T2 DLG1 chr3 197009550 - CBFA2T2 chr20 32232153 + Exonic hg19 SARC TCGA-3B-A9HS-01A 26 39 In-Frame Inter-chr q29 Tumor suppressor gene q11.21 Seq+ 44955 ChimerSeq STARFusion TCGA_RNA-Seq GBA-SCAMP3 GBA chr1 155210877 - SCAMP3 chr1 155226210 - Exonic hg19 SARC TCGA-3B-A9HS-01A 9 16 In-Frame Intra-chr Seq+ 44956 ChimerSeq STARFusion TCGA_RNA-Seq CBFA2T2-BCL2L1 CBFA2T2 chr20 32078107 + BCL2L1 chr20 30253889 - Exonic hg19 SARC TCGA-3B-A9HS-01A 8 19 Out-of-frame Intra-chr q11.21 q11.21 Oncogene Seq+ 44957 ChimerSeq STARFusion TCGA_RNA-Seq TRPM7-TEPP TRPM7 chr15 50955164 - TEPP chr16 58018207 + Exonic hg19 SARC TCGA-3B-A9HS-01A 6 26 Out-of-frame Inter-chr q21.2 q21 Seq+ 44958 ChimerSeq STARFusion TCGA_RNA-Seq SUPT16H-BRMS1 SUPT16H chr14 21842861 - BRMS1 chr11 66108337 - Exonic hg19 SARC TCGA-3B-A9HS-01A 6 21 Out-of-frame Inter-chr q11.2 q13.2 Tumor suppressor gene Seq+ 44959 ChimerSeq STARFusion TCGA_RNA-Seq TRPM7-TEPP TRPM7 chr15 50978728 - TEPP chr16 58018207 + Exonic hg19 SARC TCGA-3B-A9HS-01A 3 25 Out-of-frame Inter-chr q21.2 q21 Seq+ 44960 ChimerSeq STARFusion TCGA_RNA-Seq GBA-SCAMP3 GBA chr1 155188639 - SCAMP3 chr1 155226210 - Exonic hg19 SARC TCGA-3B-A9HS-01A 5 16 3'UTR-CDS Intra-chr Seq+ 44961 ChimerSeq STARFusion TCGA_RNA-Seq MYRF-STX5 MYRF chr11 61520262 + STX5 chr11 62575100 - Exonic hg19 SARC TCGA-3B-A9HS-01A 6 12 Out-of-frame Intra-chr q12.2 Transcription factor q12.3 Seq+ 44962 ChimerSeq STARFusion TCGA_RNA-Seq SPPL3-HVCN1 SPPL3 chr12 121341648 - HVCN1 chr12 111121069 - Exonic hg19 SARC TCGA-3B-A9HS-01A 8 2 CDS-5'UTR Intra-chr q24.31 q24.11 Seq+ 44963 ChimerSeq STARFusion TCGA_RNA-Seq BCL2L1-TPX2 BCL2L1 chr20 30309647 - TPX2 chr20 30345210 + Exonic hg19 SARC TCGA-3B-A9HS-01A 2 8 5'UTR-5'UTR Intra-chr q11.21 Oncogene q11.21 Seq+ 44964 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-NIPAL2 ACTN4 chr19 39215256 + NIPAL2 chr8 99205322 - Exonic hg19 SARC TCGA-DX-A3LS-01A 68 681 Out-of-frame Inter-chr q22.2 Seq+ 44965 ChimerSeq STARFusion TCGA_RNA-Seq C12orf65-EIF4EBP1 C12orf65 chr12 123718078 + EIF4EBP1 chr8 37914599 + Exonic hg19 SARC TCGA-DX-A3LS-01A 90 332 5'UTR-CDS Inter-chr q24.31 p11.23 Seq+ 44966 ChimerSeq STARFusion TCGA_RNA-Seq NCOA6-LSM1 NCOA6 chr20 33356267 - LSM1 chr8 38029551 - Exonic hg19 SARC TCGA-DX-A3LS-01A 66 174 In-Frame Inter-chr q11.22 p11.23 Seq+ 44967 ChimerSeq STARFusion TCGA_RNA-Seq CAMKK2-PMCH CAMKK2 chr12 121734441 - PMCH chr12 102590949 - Exonic hg19 SARC TCGA-DX-A3LS-01A 36 102 5'UTR-CDS Intra-chr q24.31 q23.2 Seq+ 44968 ChimerSeq STARFusion TCGA_RNA-Seq PITPNM2-ARHGEF25 PITPNM2 chr12 123634323 - ARHGEF25 chr12 58006713 + Exonic hg19 SARC TCGA-DX-A3LS-01A 3 161 5'UTR-CDS Intra-chr q24.31 q13.3 Seq+ 44969 ChimerSeq STARFusion TCGA_RNA-Seq PITPNM2-ARHGEF25 PITPNM2 chr12 123634323 - ARHGEF25 chr12 58007047 + Exonic hg19 SARC TCGA-DX-A3LS-01A 2 161 5'UTR-5'UTR Intra-chr q24.31 q13.3 Seq+ 44970 ChimerSeq STARFusion TCGA_RNA-Seq LRRC4-LTA4H LRRC4 chr7 127668920 - LTA4H chr12 96412681 - Exonic hg19 SARC TCGA-DX-A3LS-01A 17 85 In-Frame Inter-chr q32.1 Tumor suppressor gene q23.1 Seq+ 44971 ChimerSeq STARFusion TCGA_RNA-Seq MLXIP-ASH2L MLXIP chr12 122517172 + ASH2L chr8 37996334 + Exonic hg19 SARC TCGA-DX-A3LS-01A 8 115 Out-of-frame Inter-chr Transcription factor p11.23 Seq+ 44972 ChimerSeq STARFusion TCGA_RNA-Seq KDM2B-LRRIQ1 KDM2B chr12 122012452 - LRRIQ1 chr12 85638567 + Exonic hg19 SARC TCGA-DX-A3LS-01A 19 37 Out-of-frame Intra-chr q24.31 Transcription factor q21.31 Seq+ 44973 ChimerSeq STARFusion TCGA_RNA-Seq MLXIP-TSPAN8 MLXIP chr12 122517172 + TSPAN8 chr12 71835367 - Exonic hg19 SARC TCGA-DX-A3LS-01A 2 101 CDS-5'UTR Intra-chr Transcription factor q21.1 Seq+ 44974 ChimerSeq STARFusion TCGA_RNA-Seq MLXIP-TSPAN8 MLXIP chr12 122517172 + TSPAN8 chr12 71676599 - Exonic hg19 SARC TCGA-DX-A3LS-01A 2 101 CDS-5'UTR Intra-chr Transcription factor q21.1 Seq+ 44975 ChimerSeq STARFusion TCGA_RNA-Seq ELK3-SBNO1 ELK3 chr12 96588483 + SBNO1 chr12 123834988 - Exonic hg19 SARC TCGA-DX-A3LS-01A 9 68 5'UTR-5'UTR Intra-chr q23.1 Transcription factor q24.31 Seq+ 44976 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN8-ASH2L TSPAN8 chr12 71676496 - ASH2L chr8 37996334 + Exonic hg19 SARC TCGA-DX-A3LS-01A 7 64 5'UTR-CDS Inter-chr q21.1 p11.23 Seq+ 44977 ChimerSeq STARFusion TCGA_RNA-Seq CCT2-KCNC2 CCT2 chr12 69980124 + KCNC2 chr12 75437593 - Exonic hg19 SARC TCGA-DX-A3LS-01A 9 49 5'UTR-CDS Intra-chr q15 q21.1 Seq+ 44978 ChimerSeq STARFusion TCGA_RNA-Seq ZNF71-HSPB8 ZNF71 chr19 57112959 + HSPB8 chr12 119624830 + Exonic hg19 SARC TCGA-DX-A3LS-01A 14 27 5'UTR-CDS Inter-chr q13.43 Transcription factor q24.23 Seq+ 44979 ChimerSeq STARFusion TCGA_RNA-Seq HDAC11-CDH18 HDAC11 chr3 13525064 + CDH18 chr5 19981287 - Exonic hg19 SARC TCGA-DX-A3LS-01A 10 41 CDS-5'UTR Inter-chr p25.1 p14.3 Seq+ 44980 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN8-ASH2L TSPAN8 chr12 71835248 - ASH2L chr8 37996334 + Exonic hg19 SARC TCGA-DX-A3LS-01A 3 64 5'UTR-CDS Inter-chr q21.1 p11.23 Seq+ 44981 ChimerSeq STARFusion TCGA_RNA-Seq MCRS1-SRRM4 MCRS1 chr12 49956784 - SRRM4 chr12 119594300 + Exonic hg19 SARC TCGA-DX-A3LS-01A 7 47 Out-of-frame Intra-chr q13.12 q24.23 Seq+ 44982 ChimerSeq STARFusion TCGA_RNA-Seq COPZ1-GNPTAB COPZ1 chr12 54718965 + GNPTAB chr12 102190540 - Exonic hg19 SARC TCGA-DX-A3LS-01A 15 8 In-Frame Intra-chr q13.13 q23.2 Seq+ 44983 ChimerSeq STARFusion TCGA_RNA-Seq TRHDE-C12orf75 TRHDE chr12 72680734 + C12orf75 chr12 105789410 + Exonic hg19 SARC TCGA-DX-A3LS-01A 11 23 CDS-3'UTR Intra-chr q21.1 q23.3 Seq+ 44984 ChimerSeq STARFusion TCGA_RNA-Seq ASH2L-CASS4 ASH2L chr8 37991064 + CASS4 chr20 55020956 + Exonic hg19 SARC TCGA-DX-A3LS-01A 7 31 In-Frame Inter-chr p11.23 q13.31 Seq+ 44985 ChimerSeq STARFusion TCGA_RNA-Seq ERBB3-TMEM198B ERBB3 chr12 56482652 + TMEM198B chr12 56228635 + Exonic hg19 SARC TCGA-DX-A3LS-01A 6 32 CDS-5'UTR Intra-chr q13.2 Oncogene q13.2 Seq+ 44986 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-CPM MDM2 chr12 69203072 + CPM chr12 69279669 - Exonic hg19 SARC TCGA-DX-A3LS-01A 5 34 Out-of-frame Intra-chr q15 Oncogene q15 44987 ChimerSeq STARFusion TCGA_RNA-Seq GLIPR1L1-RAB3IP GLIPR1L1 chr12 75728682 + RAB3IP chr12 70149164 + Exonic hg19 SARC TCGA-DX-A3LS-01A 9 11 Out-of-frame Intra-chr q21.2 q15 Seq+ 44988 ChimerSeq STARFusion TCGA_RNA-Seq SEC16A-RXRA SEC16A chr9 139353586 - RXRA chr9 137293478 + Exonic hg19 SARC TCGA-DX-A3LS-01A 4 27 Out-of-frame Intra-chr q34.3 q34.2 Transcription factor Seq+ 44989 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-NUP37 NCOR2 chr12 124904503 - NUP37 chr12 102512361 - Exonic hg19 SARC TCGA-DX-A3LS-01A 6 16 CDS-5'UTR Intra-chr q24.31 q23.2 Seq+ 44990 ChimerSeq STARFusion TCGA_RNA-Seq LINC00963-STXBP1 LINC00963 chr9 132265951 + STXBP1 chr9 130430359 + Exonic hg19 SARC TCGA-DX-A3LS-01A 5 18 Out-of-frame Intra-chr q34.11 q34.11 44991 ChimerSeq STARFusion TCGA_RNA-Seq MPHOSPH9-ELK3 MPHOSPH9 chr12 123694603 - ELK3 chr12 96640718 + Exonic hg19 SARC TCGA-DX-A3LS-01A 6 14 In-Frame Intra-chr q24.31 q23.1 Transcription factor Seq+ 44992 ChimerSeq STARFusion TCGA_RNA-Seq FGD5-SLC6A6 FGD5 chr3 14863103 + SLC6A6 chr3 14526375 + Exonic hg19 SARC TCGA-DX-A3LS-01A 3 22 Out-of-frame Intra-chr p25.1 p25.1 Seq+ 44993 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-SBNO1 FRS2 chr12 69864310 + SBNO1 chr12 123834988 - Exonic hg19 SARC TCGA-DX-A3LS-01A 2 24 5'UTR-5'UTR Intra-chr q15 q24.31 Seq+ 44994 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-CPM TSFM chr12 58186856 + CPM chr12 69279669 - Exonic hg19 SARC TCGA-DX-A3LS-01A 4 16 In-Frame Intra-chr q14.1 q15 Seq+ 44995 ChimerSeq STARFusion TCGA_RNA-Seq JAK2-KIAA1432 JAK2 chr9 5029906 + KIAA1432 chr9 5772564 + Exonic hg19 SARC TCGA-DX-A3LS-01A 3 19 Out-of-frame Intra-chr p24.1 TK:JakA Oncogene 44996 ChimerSeq STARFusion TCGA_RNA-Seq RILPL1-SNRNP35 RILPL1 chr12 123983091 - SNRNP35 chr12 123942568 + Exonic hg19 SARC TCGA-DX-A3LS-01A 6 6 CDS-5'UTR Intra-chr q24.31 q24.31 44997 ChimerSeq STARFusion TCGA_RNA-Seq GNPTAB-DRAM1 GNPTAB chr12 102224404 - DRAM1 chr12 102291641 + Exonic hg19 SARC TCGA-DX-A3LS-01A 4 13 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 44998 ChimerSeq STARFusion TCGA_RNA-Seq CAMSAP1-LCN8 CAMSAP1 chr9 138773479 - LCN8 chr9 139651620 - Exonic hg19 SARC TCGA-DX-A3LS-01A 3 15 In-Frame Intra-chr q34.3 q34.3 Seq+ 44999 ChimerSeq STARFusion TCGA_RNA-Seq SEMA5A-TGIF2 SEMA5A chr5 9545696 - TGIF2 chr20 35207144 + Exonic hg19 SARC TCGA-DX-A3LS-01A 3 15 5'UTR-5'UTR Inter-chr p15.31 q11.23 Transcription factor Seq+ 45000 ChimerSeq STARFusion TCGA_RNA-Seq ZNF71-MYRFL ZNF71 chr19 57112959 + MYRFL chr12 70249060 + Exonic hg19 SARC TCGA-DX-A3LS-01A 2 15 Out-of-frame Inter-chr q13.43 Transcription factor q15 Transcription factor Seq+ 45001 ChimerSeq STARFusion TCGA_RNA-Seq PHF20-MROH8 PHF20 chr20 34515801 + MROH8 chr20 35800460 - Exonic hg19 SARC TCGA-DX-A3LS-01A 3 10 Out-of-frame Intra-chr q11.22 Transcription factor q11.23 Seq+ 45002 ChimerSeq STARFusion TCGA_RNA-Seq CHCHD3-CSMD1 CHCHD3 chr7 132570422 - CSMD1 chr8 3205683 - Exonic hg19 SARC TCGA-DX-A3LS-01A 2 13 Out-of-frame Inter-chr q33 Transcription factor p23.2 Tumor suppressor gene Seq+ 45003 ChimerSeq STARFusion TCGA_RNA-Seq HSPB8-MYRFL HSPB8 chr12 119631670 + MYRFL chr12 70249060 + Exonic hg19 SARC TCGA-DX-A3LS-01A 4 3 Out-of-frame Intra-chr q24.23 q15 Transcription factor Seq+ 45004 ChimerSeq STARFusion TCGA_RNA-Seq BAK1-FAM83C BAK1 chr6 33543075 - FAM83C chr20 33876761 - Exonic hg19 SARC TCGA-DX-A3LS-01A 2 10 Out-of-frame Inter-chr p21.31 q11.22 Seq+ 45005 ChimerSeq STARFusion TCGA_RNA-Seq ARMC12-ERGIC3 ARMC12 chr6 35706295 + ERGIC3 chr20 34142815 + Exonic hg19 SARC TCGA-DX-A3LS-01A 2 6 Out-of-frame Inter-chr p21.31 q11.22 Seq+ 45006 ChimerSeq STARFusion TCGA_RNA-Seq MPHOSPH9-MDM2 MPHOSPH9 chr12 123686711 - MDM2 chr12 69214105 + Exonic hg19 SARC TCGA-DX-A3LS-01A 2 5 In-Frame Intra-chr q24.31 q15 Oncogene 45007 ChimerSeq STARFusion TCGA_RNA-Seq MLXIP-ANKS1B MLXIP chr12 122517172 + ANKS1B chr12 99478801 - Exonic hg19 SARC TCGA-DX-A3LS-01A 2 3 Out-of-frame Intra-chr Transcription factor q23.1 Seq+ 45008 ChimerSeq STARFusion TCGA_RNA-Seq HVCN1-GOLGA3 HVCN1 chr12 111127531 - GOLGA3 chr12 133385135 - Exonic hg19 SARC TCGA-DX-A3LS-01A 2 2 5'UTR-CDS Intra-chr q24.11 q24.33 Seq+ 45009 ChimerSeq STARFusion TCGA_RNA-Seq NPRL3-FLNA NPRL3 chr16 139759 - FLNA chrX 153581828 - Exonic hg19 SARC TCGA-PC-A5DL-01A 41 1 Out-of-frame Inter-chr p13.3 q28 Tumor suppressor gene 45010 ChimerSeq STARFusion TCGA_RNA-Seq HS6ST3-FAM155A HS6ST3 chr13 96743823 + FAM155A chr13 107823134 - Exonic hg19 SARC TCGA-KD-A5QT-01A 8 40 Out-of-frame Intra-chr q32.1 q33.3 Seq+ 45011 ChimerSeq STARFusion TCGA_RNA-Seq YPEL1-DIAPH3 YPEL1 chr22 22089904 - DIAPH3 chr13 60240980 - Exonic hg19 SARC TCGA-KD-A5QT-01A 6 4 5'UTR-CDS Inter-chr q11.22 q21.2 Seq+ 45012 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-PARP1 FRS2 chr12 69864310 + PARP1 chr1 226558218 - Exonic hg19 SARC TCGA-DX-A7EI-01A 139 601 5'UTR-CDS Inter-chr q15 q42.12 Oncogene Tumor suppressor gene Seq+ 45013 ChimerSeq STARFusion TCGA_RNA-Seq MRPL42-FGD6 MRPL42 chr12 93881436 + FGD6 chr12 95475332 - Exonic hg19 SARC TCGA-DX-A7EI-01A 164 252 In-Frame Intra-chr q22 q22 Seq+ 45014 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-PARP1 FRS2 chr12 69874139 + PARP1 chr1 226558218 - Exonic hg19 SARC TCGA-DX-A7EI-01A 17 601 5'UTR-CDS Inter-chr q15 q42.12 Oncogene Tumor suppressor gene Seq+ 45015 ChimerSeq STARFusion TCGA_RNA-Seq LSM14A-TMTC2 LSM14A chr19 34699956 + TMTC2 chr12 83525989 + Exonic hg19 SARC TCGA-DX-A7EI-01A 58 364 Out-of-frame Inter-chr q21.31 Seq+ 45016 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-LSM14A CTDSP2 chr12 58240155 - LSM14A chr19 34699834 + Exonic hg19 SARC TCGA-DX-A7EI-01A 100 188 In-Frame Inter-chr q14.1 Seq+ 45017 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-TBK1 FRS2 chr12 69864310 + TBK1 chr12 64860681 + Exonic hg19 SARC TCGA-DX-A7EI-01A 39 231 5'UTR-CDS Intra-chr q15 q14.2 Other:IKK Seq+ 45018 ChimerSeq STARFusion TCGA_RNA-Seq EEA1-HOTAIR EEA1 chr12 93322819 - HOTAIR chr12 54362540 - Exonic hg19 SARC TCGA-DX-A7EI-01A 28 214 CDS-5'UTR Intra-chr q22 Transcription factor q13.13 Seq+ 45019 ChimerSeq STARFusion TCGA_RNA-Seq PRICKLE1-LRIG3 PRICKLE1 chr12 42983267 - LRIG3 chr12 59284578 - Exonic hg19 SARC TCGA-DX-A7EI-01A 45 73 5'UTR-CDS Intra-chr q12 Tumor suppressor gene q14.1 Tumor suppressor gene Seq+ 45020 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-TBK1 FRS2 chr12 69880077 + TBK1 chr12 64860681 + Exonic hg19 SARC TCGA-DX-A7EI-01A 5 231 5'UTR-CDS Intra-chr q15 q14.2 Other:IKK Seq+ 45021 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-TBK1 FRS2 chr12 69874139 + TBK1 chr12 64860681 + Exonic hg19 SARC TCGA-DX-A7EI-01A 4 231 5'UTR-CDS Intra-chr q15 q14.2 Other:IKK Seq+ 45022 ChimerSeq STARFusion TCGA_RNA-Seq PRICKLE1-ZCRB1 PRICKLE1 chr12 42877560 - ZCRB1 chr12 42707788 - Exonic hg19 SARC TCGA-DX-A7EI-01A 24 125 5'UTR-CDS Intra-chr q12 Tumor suppressor gene q12 Seq+ 45023 ChimerSeq STARFusion TCGA_RNA-Seq MSRB3-HMGA2 MSRB3 chr12 65762806 + HMGA2 chr12 66345163 + Exonic hg19 SARC TCGA-DX-A7EI-01A 25 42 Out-of-frame Intra-chr q14.3 q14.3 Transcription factor Seq+ 45024 ChimerSeq STARFusion TCGA_RNA-Seq PRICKLE1-ZCRB1 PRICKLE1 chr12 42877178 - ZCRB1 chr12 42707788 - Exonic hg19 SARC TCGA-DX-A7EI-01A 3 125 5'UTR-CDS Intra-chr q12 Tumor suppressor gene q12 Seq+ 45025 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-TMTC2 CTDSP2 chr12 58240155 - TMTC2 chr12 83525989 + Exonic hg19 SARC TCGA-DX-A7EI-01A 5 79 Out-of-frame Intra-chr q14.1 q21.31 Seq+ 45026 ChimerSeq STARFusion TCGA_RNA-Seq NR2C1-BCL7A NR2C1 chr12 95461107 - BCL7A chr12 122468606 + Exonic hg19 SARC TCGA-DX-A7EI-01A 16 35 Out-of-frame Intra-chr q22 Transcription factor Seq+ 45027 ChimerSeq STARFusion TCGA_RNA-Seq KIF5A-NAV3 KIF5A chr12 57976998 + NAV3 chr12 78594253 + Exonic hg19 SARC TCGA-DX-A7EI-01A 12 24 3'UTR-CDS Intra-chr q13.3 q21.2 Seq+ 45028 ChimerSeq STARFusion TCGA_RNA-Seq FBXL7-CDH10 FBXL7 chr5 15616181 + CDH10 chr5 24593722 - Exonic hg19 SARC TCGA-DX-A7EI-01A 5 37 CDS-5'UTR Intra-chr p15.1 p14.1 Seq+ 45029 ChimerSeq STARFusion TCGA_RNA-Seq DISC1-MDM1 DISC1 chr1 231954263 + MDM1 chr12 68715408 - Exonic hg19 SARC TCGA-DX-A7EI-01A 9 17 Out-of-frame Inter-chr q42.2 q15 Seq+ 45030 ChimerSeq STARFusion TCGA_RNA-Seq PAWR-MARC1 PAWR chr12 80083509 - MARC1 chr1 220969985 + Exonic hg19 SARC TCGA-DX-A7EI-01A 8 21 Out-of-frame Inter-chr q21.2 Tumor suppressor gene q41 Seq+ 45031 ChimerSeq STARFusion TCGA_RNA-Seq SDHAF1-TSPAN8 SDHAF1 chr19 36486610 + TSPAN8 chr12 71526604 - Exonic hg19 SARC TCGA-DX-A7EI-01A 7 25 3'UTR-CDS Inter-chr q13.12 q21.1 Seq+ 45032 ChimerSeq STARFusion TCGA_RNA-Seq MARC1-VPS33A MARC1 chr1 220971356 + VPS33A chr12 122748746 - Exonic hg19 SARC TCGA-DX-A7EI-01A 9 16 In-Frame Inter-chr q41 q24.31 Seq+ 45033 ChimerSeq STARFusion TCGA_RNA-Seq IRX2-C5orf38 IRX2 chr5 2748459 - C5orf38 chr5 2755143 + Exonic hg19 SARC TCGA-DX-A7EI-01A 7 12 Out-of-frame Intra-chr p15.33 Transcription factor p15.33 Seq+ 45034 ChimerSeq STARFusion TCGA_RNA-Seq FAM105A-AR FAM105A chr5 14609126 + AR chrX 66948516 + Exonic hg19 SARC TCGA-DX-A7EI-01A 6 8 CDS-3'UTR Inter-chr p15.2 q12 Oncogene Tumor suppressor gene Transcription factor Seq+ 45035 ChimerSeq STARFusion TCGA_RNA-Seq ARFGEF1-SHC1 ARFGEF1 chr8 68211444 - SHC1 chr1 154942675 - Exonic hg19 SARC TCGA-DX-A7EI-01A 4 12 CDS-5'UTR Inter-chr q13.2 q21.3 Seq+ 45036 ChimerSeq STARFusion TCGA_RNA-Seq NCAM2-PAWR NCAM2 chr21 22746333 + PAWR chr12 80062188 - Exonic hg19 SARC TCGA-DX-A7EI-01A 5 7 Out-of-frame Inter-chr q21.1 Tumor suppressor gene q21.2 Tumor suppressor gene Seq+ 45037 ChimerSeq STARFusion TCGA_RNA-Seq NAV1-CPM NAV1 chr1 201709204 + CPM chr12 69279669 - Exonic hg19 SARC TCGA-DX-A7EI-01A 3 13 Out-of-frame Inter-chr q32.1 q15 Seq+ 45038 ChimerSeq STARFusion TCGA_RNA-Seq VPS33A-GLTSCR1L VPS33A chr12 122716873 - GLTSCR1L chr6 42823594 + Exonic hg19 SARC TCGA-DX-A7EI-01A 4 8 Out-of-frame Inter-chr q24.31 Seq+ 45039 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF25-NTRK1 ARHGEF25 chr12 58008800 + NTRK1 chr1 156841415 + Exonic hg19 SARC TCGA-DX-A7EI-01A 2 15 In-Frame Inter-chr q13.3 q23.1 Oncogene Seq+ 45040 ChimerSeq STARFusion TCGA_RNA-Seq MEF2D-CD55 MEF2D chr1 156470278 - CD55 chr1 207532891 + Exonic hg19 SARC TCGA-DX-A7EI-01A 3 4 5'UTR-CDS Intra-chr q22 Transcription factor q32.2 Seq+ 45041 ChimerSeq STARFusion TCGA_RNA-Seq TRIP13-GPATCH2 TRIP13 chr5 914692 + GPATCH2 chr1 217604707 - Exonic hg19 SARC TCGA-DX-A7EI-01A 2 7 Out-of-frame Inter-chr p15.33 q41 Seq+ 45042 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-COL1A1 SEPT9 chr17 75471345 + COL1A1 chr17 48265510 - Exonic hg19 SARC TCGA-DX-A7EI-01A 3 1 5'UTR-CDS Intra-chr q21.33 Oncogene 45043 ChimerSeq STARFusion TCGA_RNA-Seq PRR15-COL1A2 PRR15 chr7 29605897 + COL1A2 chr7 94029512 + Exonic hg19 SARC TCGA-DX-A7EI-01A 3 0 Out-of-frame Intra-chr p14.3 q21.3 45044 ChimerSeq STARFusion TCGA_RNA-Seq PLD5-SYT1 PLD5 chr1 242687390 - SYT1 chr12 79842698 + Exonic hg19 SARC TCGA-DX-A7EI-01A 2 3 In-Frame Inter-chr q43 q21.2 45045 ChimerSeq STARFusion TCGA_RNA-Seq YEATS4-SLC25A27 YEATS4 chr12 69764755 + SLC25A27 chr6 46636446 + Exonic hg19 SARC TCGA-DX-A7EI-01A 2 2 In-Frame Inter-chr q15 p12.3 45046 ChimerSeq STARFusion TCGA_RNA-Seq MFHAS1-KIRREL2 MFHAS1 chr8 8747571 - KIRREL2 chr19 36351811 + Exonic hg19 SARC TCGA-DX-A7EI-01A 2 1 In-Frame Inter-chr p23.1 q13.12 45047 ChimerSeq STARFusion TCGA_RNA-Seq RMND1-MTHFD1L RMND1 chr6 151773151 - MTHFD1L chr6 151226786 + Exonic hg19 SARC TCGA-X9-A971-01A 14 475 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 45048 ChimerSeq STARFusion TCGA_RNA-Seq RMND1-MTHFD1L RMND1 chr6 151773151 - MTHFD1L chr6 151239713 + Exonic hg19 SARC TCGA-X9-A971-01A 3 452 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 45049 ChimerSeq STARFusion TCGA_RNA-Seq RMND1-MTHFD1L RMND1 chr6 151773151 - MTHFD1L chr6 151219996 + Exonic hg19 SARC TCGA-X9-A971-01A 2 452 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 45050 ChimerSeq STARFusion TCGA_RNA-Seq YEATS4-KIAA1244 YEATS4 chr12 69753803 + KIAA1244 chr6 138612870 + Exonic hg19 SARC TCGA-X9-A971-01A 46 174 Out-of-frame Inter-chr q15 Seq+ 45051 ChimerSeq STARFusion TCGA_RNA-Seq VMP1-TK1 VMP1 chr17 57785109 + TK1 chr17 76171699 - Exonic hg19 SARC TCGA-X9-A971-01A 30 99 5'UTR-CDS Intra-chr q23.1 q25.3 Seq+ 45052 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-TBC1D30 FRS2 chr12 69864310 + TBC1D30 chr12 65230270 + Exonic hg19 SARC TCGA-X9-A971-01A 9 160 5'UTR-CDS Intra-chr q15 q14.3 Seq+ 45053 ChimerSeq STARFusion TCGA_RNA-Seq GRIK2-RNF217 GRIK2 chr6 102376507 + RNF217 chr6 125366357 + Exonic hg19 SARC TCGA-X9-A971-01A 35 53 In-Frame Intra-chr q16.3 q22.31 Seq+ 45054 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-TBC1D30 FRS2 chr12 69864310 + TBC1D30 chr12 65225899 + Exonic hg19 SARC TCGA-X9-A971-01A 3 160 5'UTR-CDS Intra-chr q15 q14.3 Seq+ 45055 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-TBC1D30 FRS2 chr12 69880077 + TBC1D30 chr12 65225899 + Exonic hg19 SARC TCGA-X9-A971-01A 3 160 5'UTR-CDS Intra-chr q15 q14.3 Seq+ 45056 ChimerSeq STARFusion TCGA_RNA-Seq SCAF8-IL20RA SCAF8 chr6 155114110 + IL20RA chr6 137338240 - Exonic hg19 SARC TCGA-X9-A971-01A 20 85 In-Frame Intra-chr q25.2 q23.3 Seq+ 45057 ChimerSeq STARFusion TCGA_RNA-Seq GNA11-TMCO3 GNA11 chr19 3094785 + TMCO3 chr13 114174931 + Exonic hg19 SARC TCGA-X9-A971-01A 13 57 In-Frame Inter-chr p13.3 Oncogene q34 Seq+ 45058 ChimerSeq STARFusion TCGA_RNA-Seq AKAP12-ASCC3 AKAP12 chr6 151561859 + ASCC3 chr6 101037935 - Exonic hg19 SARC TCGA-X9-A971-01A 17 40 Out-of-frame Intra-chr q25.1 Tumor suppressor gene q16.3 Seq+ 45059 ChimerSeq STARFusion TCGA_RNA-Seq SCAF8-IL20RA SCAF8 chr6 155114110 + IL20RA chr6 137359268 - Exonic hg19 SARC TCGA-X9-A971-01A 4 85 Out-of-frame Intra-chr q25.2 q23.3 Seq+ 45060 ChimerSeq STARFusion TCGA_RNA-Seq WDFY3-PLAGL1 WDFY3 chr4 85887362 - PLAGL1 chr6 144290115 - Exonic hg19 SARC TCGA-X9-A971-01A 15 34 5'UTR-5'UTR Inter-chr q21.23 q24.2 Tumor suppressor gene Transcription factor Seq+ 45061 ChimerSeq STARFusion TCGA_RNA-Seq AKAP12-ASCC3 AKAP12 chr6 151561859 + ASCC3 chr6 100988263 - Exonic hg19 SARC TCGA-X9-A971-01A 12 40 In-Frame Intra-chr q25.1 Tumor suppressor gene q16.3 Seq+ 45062 ChimerSeq STARFusion TCGA_RNA-Seq LAMA2-GRIK2 LAMA2 chr6 129513998 + GRIK2 chr6 102124498 + Exonic hg19 SARC TCGA-X9-A971-01A 12 33 Out-of-frame Intra-chr q22.33 q16.3 Seq+ 45063 ChimerSeq STARFusion TCGA_RNA-Seq GNA11-TMCO3 GNA11 chr19 3094785 + TMCO3 chr13 114193672 + Exonic hg19 SARC TCGA-X9-A971-01A 3 57 Out-of-frame Inter-chr p13.3 Oncogene q34 Seq+ 45064 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-LAMA2 CPSF6 chr12 69633486 + LAMA2 chr6 129498851 + Exonic hg19 SARC TCGA-X9-A971-01A 4 50 Out-of-frame Inter-chr q15 q22.33 Seq+ 45065 ChimerSeq STARFusion TCGA_RNA-Seq USP15-DPY19L2 USP15 chr12 62719714 + DPY19L2 chr12 63964637 - Exonic hg19 SARC TCGA-X9-A971-01A 5 42 Out-of-frame Intra-chr q14.1 q14.2 Seq+ 45066 ChimerSeq STARFusion TCGA_RNA-Seq GRIP1-TMEM5 GRIP1 chr12 66990627 - TMEM5 chr12 64199014 + Exonic hg19 SARC TCGA-X9-A971-01A 4 45 Out-of-frame Intra-chr q14.3 q14.2 Seq+ 45067 ChimerSeq STARFusion TCGA_RNA-Seq OPRM1-TCEAL1 OPRM1 chr6 154567894 + TCEAL1 chrX 102884400 + Exonic hg19 SARC TCGA-X9-A971-01A 10 16 Out-of-frame Inter-chr q25.2 q22.2 Seq+ 45068 ChimerSeq STARFusion TCGA_RNA-Seq OPRM1-TCEAL3 OPRM1 chr6 154567894 + TCEAL3 chrX 102884400 + Exonic hg19 SARC TCGA-X9-A971-01A 10 16 Out-of-frame Inter-chr q25.2 q22.2 Seq+ 45069 ChimerSeq STARFusion TCGA_RNA-Seq USP15-DPY19L2 USP15 chr12 62719714 + DPY19L2 chr12 63977616 - Exonic hg19 SARC TCGA-X9-A971-01A 4 32 In-Frame Intra-chr q14.1 q14.2 Seq+ 45070 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC17-SYT1 ZDHHC17 chr12 77199219 + SYT1 chr12 79349242 + Exonic hg19 SARC TCGA-X9-A971-01A 4 32 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 45071 ChimerSeq STARFusion TCGA_RNA-Seq PLP1-SCAF8 PLP1 chrX 103031927 + SCAF8 chr6 155095123 + Exonic hg19 SARC TCGA-X9-A971-01A 5 26 Out-of-frame Inter-chr q22.2 q25.2 Seq+ 45072 ChimerSeq STARFusion TCGA_RNA-Seq SYT1-PPFIA2 SYT1 chr12 79441142 + PPFIA2 chr12 81851645 - Exonic hg19 SARC TCGA-X9-A971-01A 7 15 5'UTR-CDS Intra-chr q21.2 q21.31 Seq+ 45073 ChimerSeq STARFusion TCGA_RNA-Seq SYNE1-ESR1 SYNE1 chr6 152565672 - ESR1 chr6 152415520 + Exonic hg19 SARC TCGA-X9-A971-01A 4 25 Out-of-frame Intra-chr q25.2 Oncogene q25.1 Oncogene Tumor suppressor gene Transcription factor Seq+ 45074 ChimerSeq STARFusion TCGA_RNA-Seq USP15-DPY19L2 USP15 chr12 62719714 + DPY19L2 chr12 63984907 - Exonic hg19 SARC TCGA-X9-A971-01A 2 32 Out-of-frame Intra-chr q14.1 q14.2 Seq+ 45075 ChimerSeq STARFusion TCGA_RNA-Seq LEMD3-DDX11L1 LEMD3 chr12 65612399 + DDX11L1 chr1 12010 + Exonic hg19 SARC TCGA-X9-A971-01A 5 19 CDS-3'UTR Inter-chr q14.3 p36.33 45076 ChimerSeq STARFusion TCGA_RNA-Seq UTRN-WIF1 UTRN chr6 144809970 + WIF1 chr12 65471634 - Exonic hg19 SARC TCGA-X9-A971-01A 4 21 In-Frame Inter-chr q24.2 q14.3 Tumor suppressor gene Seq+ 45077 ChimerSeq STARFusion TCGA_RNA-Seq SCAF8-TBC1D30 SCAF8 chr6 155143543 + TBC1D30 chr12 65179661 + Exonic hg19 SARC TCGA-X9-A971-01A 5 15 CDS-5'UTR Inter-chr q25.2 q14.3 45078 ChimerSeq STARFusion TCGA_RNA-Seq GRIK2-WASF1 GRIK2 chr6 102134228 + WASF1 chr6 110448832 - Exonic hg19 SARC TCGA-X9-A971-01A 6 9 CDS-5'UTR Intra-chr q16.3 q21 Seq+ 45079 ChimerSeq STARFusion TCGA_RNA-Seq SCAF8-UTRN SCAF8 chr6 155063152 + UTRN chr6 144820393 + Exonic hg19 SARC TCGA-X9-A971-01A 2 23 Out-of-frame Intra-chr q25.2 q24.2 45080 ChimerSeq STARFusion TCGA_RNA-Seq PLP1-C19orf26 PLP1 chrX 103031927 + C19orf26 chr19 1236120 - Exonic hg19 SARC TCGA-X9-A971-01A 3 18 CDS-5'UTR Inter-chr q22.2 45081 ChimerSeq STARFusion TCGA_RNA-Seq MACF1-BMP8A MACF1 chr1 39571389 + BMP8A chr1 39976846 + Exonic hg19 SARC TCGA-X9-A971-01A 3 15 Out-of-frame Intra-chr p34.3 p34.3 Seq+ 45082 ChimerSeq STARFusion TCGA_RNA-Seq MAML3-CCDC170 MAML3 chr4 140810511 - CCDC170 chr6 151869439 + Exonic hg19 SARC TCGA-X9-A971-01A 4 11 In-Frame Inter-chr q31.1 q25.1 Seq+ 45083 ChimerSeq STARFusion TCGA_RNA-Seq RGS17-SYNE1 RGS17 chr6 153452259 - SYNE1 chr6 152809638 - Exonic hg19 SARC TCGA-X9-A971-01A 4 11 5'UTR-CDS Intra-chr q25.2 q25.2 Oncogene Seq+ 45084 ChimerSeq STARFusion TCGA_RNA-Seq TXNRD2-EVX1 TXNRD2 chr22 19918553 - EVX1 chr7 27284667 + Exonic hg19 SARC TCGA-X9-A971-01A 5 5 In-Frame Inter-chr q11.21 p15.2 Transcription factor Seq+ 45085 ChimerSeq STARFusion TCGA_RNA-Seq C12orf66-NXF3 C12orf66 chr12 64609458 - NXF3 chrX 102339811 - Exonic hg19 SARC TCGA-X9-A971-01A 4 8 Out-of-frame Inter-chr q14.2 q22.1 Seq+ 45086 ChimerSeq STARFusion TCGA_RNA-Seq LINC01088-SNCA LINC01088 chr4 80007416 + SNCA chr4 90650428 - Exonic hg19 SARC TCGA-X9-A971-01A 5 4 Out-of-frame Intra-chr q21.21 q22.1 45087 ChimerSeq STARFusion TCGA_RNA-Seq METTL24-REPS1 METTL24 chr6 110679158 - REPS1 chr6 139251235 - Exonic hg19 SARC TCGA-X9-A971-01A 4 8 Out-of-frame Intra-chr q21 q24.1 Seq+ 45088 ChimerSeq STARFusion TCGA_RNA-Seq PDP1-INA PDP1 chr8 94929307 + INA chr10 105046792 + Exonic hg19 SARC TCGA-X9-A971-01A 4 8 5'UTR-CDS Inter-chr q22.1 q24.33 Seq+ 45089 ChimerSeq STARFusion TCGA_RNA-Seq RNASEH2B-AGXT2 RNASEH2B chr13 51484276 + AGXT2 chr5 35014224 - Exonic hg19 SARC TCGA-X9-A971-01A 4 8 Out-of-frame Inter-chr q14.3 p13.2 Seq+ 45090 ChimerSeq STARFusion TCGA_RNA-Seq EEF1DP3-BLVRB EEF1DP3 chr13 32421076 + BLVRB chr19 40964452 - Exonic hg19 SARC TCGA-X9-A971-01A 3 9 5'UTR-CDS Inter-chr q13.1 q13.2 Seq+ 45091 ChimerSeq STARFusion TCGA_RNA-Seq MEX3D-DOCK11 MEX3D chr19 1567463 - DOCK11 chrX 117676688 + Exonic hg19 SARC TCGA-X9-A971-01A 2 13 Out-of-frame Inter-chr p13.3 q24 Seq+ 45092 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1244-GRIK2 KIAA1244 chr6 138601301 + GRIK2 chr6 102483216 + Exonic hg19 SARC TCGA-X9-A971-01A 2 11 Out-of-frame Intra-chr q16.3 Seq+ 45093 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-SIM1 ESR1 chr6 152023140 + SIM1 chr6 100841765 - Exonic hg19 SARC TCGA-X9-A971-01A 2 10 5'UTR-CDS Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q16.3 Transcription factor Seq+ 45094 ChimerSeq STARFusion TCGA_RNA-Seq NREP-HMGN1P13 NREP chr5 111071127 - HMGN1P13 chr5 110908022 - Exonic hg19 SARC TCGA-X9-A971-01A 3 6 Out-of-frame Intra-chr q22.1 q22.1 45095 ChimerSeq STARFusion TCGA_RNA-Seq COL3A1-RRBP1 COL3A1 chr2 189859057 + RRBP1 chr20 17639251 - Exonic hg19 SARC TCGA-X9-A971-01A 3 5 Out-of-frame Inter-chr q32.2 p12.1 45096 ChimerSeq STARFusion TCGA_RNA-Seq RNASEH2B-AGXT2 RNASEH2B chr13 51484276 + AGXT2 chr5 35010254 - Exonic hg19 SARC TCGA-X9-A971-01A 2 8 Out-of-frame Inter-chr q14.3 p13.2 Seq+ 45097 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-PPFIA1 CTTN chr11 70244720 + PPFIA1 chr11 70189775 + Exonic hg19 SARC TCGA-VT-A80J-02A 32 38 5'UTR-5'UTR Intra-chr q13.3 q13.3 Seq+ 45098 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-SYT15 ANKRD11 chr16 89556653 - SYT15 chr10 46969386 - Exonic hg19 SARC TCGA-VT-A80J-02A 9 26 5'UTR-CDS Inter-chr q24.3 q11.22 Seq+ 45099 ChimerSeq STARFusion TCGA_RNA-Seq CELF1-XKR5 CELF1 chr11 47493743 - XKR5 chr8 6669860 - Exonic hg19 SARC TCGA-VT-A80J-02A 7 22 3'UTR-CDS Inter-chr p11.2 p23.1 Seq+ 45100 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-LINC00478 WHSC1L1 chr8 38176413 - LINC00478 chr21 17603376 + Exonic hg19 SARC TCGA-VT-A80J-02A 4 17 CDS-5'UTR Inter-chr p11.23 Tumor suppressor gene 45101 ChimerSeq STARFusion TCGA_RNA-Seq DNMBP-RFWD2 DNMBP chr10 101769595 - RFWD2 chr1 176104222 - Exonic hg19 SARC TCGA-VT-A80J-02A 2 17 5'UTR-CDS Inter-chr q24.2 q25.2 Tumor suppressor gene Seq+ 45102 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-SYTL2 BCAS3 chr17 59161925 + SYTL2 chr11 85425550 - Exonic hg19 SARC TCGA-VT-A80J-02A 3 6 In-Frame Inter-chr q23.2 q14.1 Seq+ 45103 ChimerSeq STARFusion TCGA_RNA-Seq CHD6-MYH7B CHD6 chr20 40068640 - MYH7B chr20 33583139 + Exonic hg19 SARC TCGA-VT-A80J-02A 3 6 Out-of-frame Intra-chr q12 q11.22 Seq+ 45104 ChimerSeq STARFusion TCGA_RNA-Seq LINC00478-C21orf37 LINC00478 chr21 17603435 + C21orf37 chr21 18821183 + Exonic hg19 SARC TCGA-VT-A80J-02A 2 8 5'UTR-5'UTR Intra-chr 45105 ChimerSeq STARFusion TCGA_RNA-Seq VCL-C10orf11 VCL chr10 75860855 + C10orf11 chr10 78316967 + Exonic hg19 SARC TCGA-DX-A3UD-01A 3 19 Out-of-frame Intra-chr q22.2 Seq+ 45106 ChimerSeq STARFusion TCGA_RNA-Seq ACTG2-AEBP1 ACTG2 chr2 74143890 + AEBP1 chr7 44146452 + Exonic hg19 SARC TCGA-DX-A6BB-01A 3 4 Out-of-frame Inter-chr p13.1 p13 Transcription factor 45107 ChimerSeq STARFusion TCGA_RNA-Seq MIR143HG-C9orf3 MIR143HG chr5 148803960 + C9orf3 chr9 97848964 + Exonic hg19 SARC TCGA-DX-A6BB-01A 2 2 5'UTR-3'UTR Inter-chr q22.32 45108 ChimerSeq STARFusion TCGA_RNA-Seq KAT6B-C10orf11 KAT6B chr10 76603236 + C10orf11 chr10 78084159 + Exonic hg19 SARC TCGA-DX-A6BB-01A 2 1 In-Frame Intra-chr Oncogene 45109 ChimerSeq STARFusion TCGA_RNA-Seq TBCD-HLCS TBCD chr17 80888519 + HLCS chr21 38139586 - Exonic hg19 SARC TCGA-HB-A43Z-01A 18 109 In-Frame Inter-chr q22.13 Seq+ 45110 ChimerSeq STARFusion TCGA_RNA-Seq MATN2-POP1 MATN2 chr8 98973758 + POP1 chr8 99135564 + Exonic hg19 SARC TCGA-HB-A43Z-01A 7 51 CDS-5'UTR Intra-chr q22.1 q22.2 Seq+ 45111 ChimerSeq STARFusion TCGA_RNA-Seq SARNP-MMP19 SARNP chr12 56211450 - MMP19 chr12 56236222 - Exonic hg19 SARC TCGA-HB-A43Z-01A 14 13 In-Frame Intra-chr q13.2 q13.2 Seq+ 45112 ChimerSeq STARFusion TCGA_RNA-Seq BRAF-DENND2A BRAF chr7 140534409 - DENND2A chr7 140219518 - Exonic hg19 SARC TCGA-HB-A43Z-01A 5 36 Out-of-frame Intra-chr q34 TKL:RAF Oncogene q34 Seq+ 45113 ChimerSeq STARFusion TCGA_RNA-Seq VDAC2-C10orf11 VDAC2 chr10 76973828 + C10orf11 chr10 77795766 + Exonic hg19 SARC TCGA-HB-A43Z-01A 4 29 Out-of-frame Intra-chr q22.2 Seq+ 45114 ChimerSeq STARFusion TCGA_RNA-Seq DGUOK-ACTG2 DGUOK chr2 74154179 + ACTG2 chr2 74135800 + Exonic hg19 SARC TCGA-HB-A43Z-01A 2 22 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 45115 ChimerSeq STARFusion TCGA_RNA-Seq DGUOK-ACTG2 DGUOK chr2 74154179 + ACTG2 chr2 74129487 + Exonic hg19 SARC TCGA-HB-A43Z-01A 2 22 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 45116 ChimerSeq STARFusion TCGA_RNA-Seq SLC8A1-SRSF7 SLC8A1 chr2 40655613 - SRSF7 chr2 38977336 - Exonic hg19 SARC TCGA-HB-A43Z-01A 3 10 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 45117 ChimerSeq STARFusion TCGA_RNA-Seq GLTSCR1-TPRX2P GLTSCR1 chr19 48112425 + TPRX2P chr19 48363370 + Exonic hg19 SARC TCGA-HB-A43Z-01A 3 6 Out-of-frame Intra-chr Tumor suppressor gene q13.33 45118 ChimerSeq STARFusion TCGA_RNA-Seq APOBEC3D-ABCD4 APOBEC3D chr22 39419019 + ABCD4 chr14 74761901 - Exonic hg19 SARC TCGA-HB-A43Z-01A 2 1 Out-of-frame Inter-chr q13.1 q24.3 45119 ChimerSeq STARFusion TCGA_RNA-Seq PID1-MRPS6 PID1 chr2 230020534 - MRPS6 chr21 35497641 + Exonic hg19 SARC TCGA-3B-A9HT-01A 43 362 In-Frame Inter-chr q36.3 q22.11 Seq+ 45120 ChimerSeq STARFusion TCGA_RNA-Seq AGAP1-ATG4B AGAP1 chr2 236403493 + ATG4B chr2 242590425 + Exonic hg19 SARC TCGA-3B-A9HT-01A 4 25 In-Frame Intra-chr q37.2 q37.3 Seq+ 45121 ChimerSeq STARFusion TCGA_RNA-Seq REREP1Y-OFD1P10Y REREP1Y chrY 25608682 + OFD1P10Y chrY 25732847 + Exonic hg19 SARC TCGA-3B-A9HT-01A 4 7 Out-of-frame Intra-chr q11.223 q11.223 45122 ChimerSeq STARFusion TCGA_RNA-Seq ZNF793-ST3GAL6 ZNF793 chr19 38014356 + ST3GAL6 chr3 98539632 + Exonic hg19 SARC TCGA-3B-A9HT-01A 3 10 CDS-3'UTR Inter-chr q13.12 Transcription factor q12.1 Seq+ 45123 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R3B-ERI1 PPP1R3B chr8 9008073 - ERI1 chr8 8957369 + Exonic hg19 SARC TCGA-DX-A3UF-01A 15 43 5'UTR-3'UTR Intra-chr p23.1 p23.1 Seq+ 45124 ChimerSeq STARFusion TCGA_RNA-Seq UBE2G2-LINC00478 UBE2G2 chr21 46221621 - LINC00478 chr21 17909699 + Exonic hg19 SARC TCGA-DX-A3UF-01A 14 41 5'UTR-5'UTR Intra-chr q22.3 45125 ChimerSeq STARFusion TCGA_RNA-Seq RB1-CLEC2B RB1 chr13 48881542 + CLEC2B chr12 10015172 - Exonic hg19 SARC TCGA-DX-A3UF-01A 9 38 CDS-5'UTR Inter-chr q14.2 Oncogene Tumor suppressor gene p13.31 Seq+ 45126 ChimerSeq STARFusion TCGA_RNA-Seq CCM2-SLC9B1P2 CCM2 chr7 45078025 + SLC9B1P2 chr2 92102236 - Exonic hg19 SARC TCGA-DX-A3UF-01A 5 30 Out-of-frame Inter-chr p13 p11.1 45127 ChimerSeq STARFusion TCGA_RNA-Seq RB1-CLEC2B RB1 chr13 48881542 + CLEC2B chr12 10010236 - Exonic hg19 SARC TCGA-DX-A3UF-01A 2 38 Out-of-frame Inter-chr q14.2 Oncogene Tumor suppressor gene p13.31 Seq+ 45128 ChimerSeq STARFusion TCGA_RNA-Seq FAM126B-COQ10B FAM126B chr2 201910219 - COQ10B chr2 198324656 + Exonic hg19 SARC TCGA-DX-A3UF-01A 2 23 5'UTR-CDS Intra-chr q33.1 q33.1 Seq+ 45129 ChimerSeq STARFusion TCGA_RNA-Seq GNG7-PAQR5 GNG7 chr19 2520606 - PAQR5 chr15 69692313 + Exonic hg19 SARC TCGA-DX-A3UF-01A 5 6 In-Frame Inter-chr p13.3 q23 Seq+ 45130 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K7CL-BACH1 MAP3K7CL chr21 30532377 + BACH1 chr21 30660305 + Exonic hg19 SARC TCGA-DX-A3UF-01A 2 0 Out-of-frame Intra-chr q21.3 q21.3 Transcription factor 45131 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K7CL-LINC00189 MAP3K7CL chr21 30532377 + LINC00189 chr21 30660305 + Exonic hg19 SARC TCGA-DX-A3UF-01A 2 0 Out-of-frame Intra-chr q21.3 q21.3 45132 ChimerSeq STARFusion TCGA_RNA-Seq COL1A2-MBNL1 COL1A2 chr7 94027071 + MBNL1 chr3 151987554 + Exonic hg19 SARC TCGA-WK-A8XT-01A 6 2 Out-of-frame Inter-chr q21.3 q25.1 45133 ChimerSeq STARFusion TCGA_RNA-Seq CNOT2-TBC1D30 CNOT2 chr12 70637260 + TBC1D30 chr12 65237160 + Exonic hg19 SARC TCGA-WK-A8XT-01A 5 4 5'UTR-CDS Intra-chr q15 q14.3 Seq+ 45134 ChimerSeq STARFusion TCGA_RNA-Seq RPAIN-STX8 RPAIN chr17 5326149 + STX8 chr17 9153962 - Exonic hg19 SARC TCGA-HB-A2OT-01A 13 175 In-Frame Intra-chr p13.2 p13.1 Seq+ 45135 ChimerSeq STARFusion TCGA_RNA-Seq RPAIN-STX8 RPAIN chr17 5331531 + STX8 chr17 9153962 - Exonic hg19 SARC TCGA-HB-A2OT-01A 2 175 Out-of-frame Intra-chr p13.2 p13.1 Seq+ 45136 ChimerSeq STARFusion TCGA_RNA-Seq FAM212B-DHRS3 FAM212B chr1 112281808 - DHRS3 chr1 12640694 - Exonic hg19 SARC TCGA-HB-A2OT-01A 22 90 In-Frame Intra-chr p13.2 p36.21 Seq+ 45137 ChimerSeq STARFusion TCGA_RNA-Seq MYH10-TEKT3 MYH10 chr17 8492399 - TEKT3 chr17 15217547 - Exonic hg19 SARC TCGA-HB-A2OT-01A 14 59 In-Frame Intra-chr p13.1 p12 Seq+ 45138 ChimerSeq STARFusion TCGA_RNA-Seq C6orf89-SOD2 C6orf89 chr6 36894637 + SOD2 chr6 160100839 - Exonic hg19 SARC TCGA-HB-A2OT-01A 5 33 Out-of-frame Intra-chr p21.2 q25.3 Tumor suppressor gene Seq+ 45139 ChimerSeq STARFusion TCGA_RNA-Seq IGFBPL1-FAM214B IGFBPL1 chr9 38413234 - FAM214B chr9 35108734 - Exonic hg19 SARC TCGA-HB-A2OT-01A 3 3 CDS-5'UTR Intra-chr p13.1 Tumor suppressor gene p13.3 Seq+ 45140 ChimerSeq STARFusion TCGA_RNA-Seq PLGRKT-EVC PLGRKT chr9 5431897 - EVC chr4 5720975 + Exonic hg19 SARC TCGA-HB-A2OT-01A 2 1 In-Frame Inter-chr p24.1 p16.2 45141 ChimerSeq STARFusion TCGA_RNA-Seq FN1-ACTA2 FN1 chr2 216248151 - ACTA2 chr10 90697861 - Exonic hg19 SARC TCGA-DX-A48U-01A 3 18 Out-of-frame Inter-chr q35 Oncogene q23.31 45142 ChimerSeq STARFusion TCGA_RNA-Seq PABPC4-MACF1 PABPC4 chr1 40034474 - MACF1 chr1 39916724 + Exonic hg19 SARC TCGA-DX-A48U-01A 3 11 Out-of-frame Intra-chr p34.3 p34.3 Seq+ 45143 ChimerSeq STARFusion TCGA_RNA-Seq LINC00670-MYOCD LINC00670 chr17 12494065 + MYOCD chr17 12608445 + Exonic hg19 SARC TCGA-DX-A48U-01A 2 4 Out-of-frame Intra-chr p12 p12 45144 ChimerSeq STARFusion TCGA_RNA-Seq TPM2-SERF2 TPM2 chr9 35685061 - SERF2 chr15 44086572 + Exonic hg19 SARC TCGA-DX-A48U-01A 2 1 CDS-5'UTR Inter-chr p13.3 q15.3 45145 ChimerSeq STARFusion TCGA_RNA-Seq GTF2H3-EIF2B1 GTF2H3 chr12 124130108 + EIF2B1 chr12 124109409 - Exonic hg19 SARC TCGA-DX-A48K-01A 9 43 In-Frame Intra-chr q24.31 q24.31 Seq+ 45146 ChimerSeq STARFusion TCGA_RNA-Seq SENP6-BAI3 SENP6 chr6 76312292 + BAI3 chr6 70064125 + Exonic hg19 SARC TCGA-DX-A48K-01A 5 28 Out-of-frame Intra-chr q14.1 Seq+ 45147 ChimerSeq STARFusion TCGA_RNA-Seq AACS-GPR123 AACS chr12 125576069 + GPR123 chr10 134944773 + Exonic hg19 SARC TCGA-DX-A48K-01A 5 13 CDS-3'UTR Inter-chr q24.31 45148 ChimerSeq STARFusion TCGA_RNA-Seq ACSF3-ZNF483 ACSF3 chr16 89212457 + ZNF483 chr9 114338645 + Exonic hg19 SARC TCGA-DX-A48K-01A 5 9 Out-of-frame Inter-chr q24.3 q31.3 Transcription factor Seq+ 45149 ChimerSeq STARFusion TCGA_RNA-Seq DLG1-WDR60 DLG1 chr3 196807922 - WDR60 chr7 158711431 + Exonic hg19 SARC TCGA-DX-A48K-01A 2 16 In-Frame Inter-chr q29 Tumor suppressor gene q36.3 Seq+ 45150 ChimerSeq STARFusion TCGA_RNA-Seq FAM120A-SUSD1 FAM120A chr9 96289524 + SUSD1 chr9 114804240 - Exonic hg19 SARC TCGA-DX-A48K-01A 2 16 Out-of-frame Intra-chr q22.31 q32 Seq+ 45151 ChimerSeq STARFusion TCGA_RNA-Seq SS18-ZNF521 SS18 chr18 23667465 - ZNF521 chr18 22672045 - Exonic hg19 SARC TCGA-DX-A48K-01A 2 13 Out-of-frame Intra-chr q11.2 q11.2 Oncogene Transcription factor Seq+ 45152 ChimerSeq STARFusion TCGA_RNA-Seq FAM135A-GRM1 FAM135A chr6 71212494 + GRM1 chr6 146348784 + Exonic hg19 SARC TCGA-DX-A48K-01A 3 8 CDS-5'UTR Intra-chr q13 q24.3 Seq+ 45153 ChimerSeq STARFusion TCGA_RNA-Seq DYM-OAS3 DYM chr18 46986768 - OAS3 chr12 113379375 + Exonic hg19 SARC TCGA-DX-A48K-01A 2 11 5'UTR-CDS Inter-chr q21.1 q24.13 Seq+ 45154 ChimerSeq STARFusion TCGA_RNA-Seq COL1A2-VARS COL1A2 chr7 94041432 + VARS chr6 31747042 - Exonic hg19 SARC TCGA-DX-A48K-01A 4 1 Out-of-frame Inter-chr q21.3 45155 ChimerSeq STARFusion TCGA_RNA-Seq TRAK2-AP1S3 TRAK2 chr2 202285140 - AP1S3 chr2 224642586 - Exonic hg19 SARC TCGA-DX-A48K-01A 4 1 Out-of-frame Intra-chr q33.1 q36.1 Seq+ 45156 ChimerSeq STARFusion TCGA_RNA-Seq KDM4A-FAF1 KDM4A chr1 44163684 + FAF1 chr1 50957473 - Exonic hg19 SARC TCGA-DX-A48K-01A 3 3 In-Frame Intra-chr p34.2 p32.3 Seq+ 45157 ChimerSeq STARFusion TCGA_RNA-Seq NEO1-BBS4 NEO1 chr15 73428368 + BBS4 chr15 73002041 + Exonic hg19 SARC TCGA-DX-A48K-01A 2 6 In-Frame Intra-chr q24.1 q24.1 Seq+ 45158 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R4-MUSK PPP2R4 chr9 131904831 + MUSK chr9 113509921 + Exonic hg19 SARC TCGA-DX-A48K-01A 2 5 In-Frame Intra-chr Tumor suppressor gene q31.3 TK:Musk 45159 ChimerSeq STARFusion TCGA_RNA-Seq HSPB8-INIP HSPB8 chr12 119617484 + INIP chr9 115456513 - Exonic hg19 SARC TCGA-DX-A48K-01A 2 4 Out-of-frame Inter-chr q24.23 q32 Seq+ 45160 ChimerSeq STARFusion TCGA_RNA-Seq CPS1-PLEKHM3 CPS1 chr2 211481265 + PLEKHM3 chr2 208693220 - Exonic hg19 SARC TCGA-DX-A48K-01A 2 3 In-Frame Intra-chr q34 q33.3 Seq+ 45161 ChimerSeq STARFusion TCGA_RNA-Seq CDH2-EPB41L3 CDH2 chr18 25727637 - EPB41L3 chr18 5489193 - Exonic hg19 SARC TCGA-MJ-A68H-01A 13 59 CDS-5'UTR Intra-chr q12.1 Oncogene p11.31 Tumor suppressor gene Seq+ 45162 ChimerSeq STARFusion TCGA_RNA-Seq ARID1A-TRNP1 ARID1A chr1 27059283 + TRNP1 chr1 27326338 + Exonic hg19 SARC TCGA-MJ-A68H-01A 7 27 CDS-3'UTR Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 45163 ChimerSeq STARFusion TCGA_RNA-Seq HIF3A-DNMT1 HIF3A chr19 46838243 + DNMT1 chr19 10277361 - Exonic hg19 SARC TCGA-MJ-A68H-01A 7 10 Out-of-frame Intra-chr q13.32 Transcription factor p13.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 45164 ChimerSeq STARFusion TCGA_RNA-Seq SIN3B-C19orf57 SIN3B chr19 16952779 + C19orf57 chr19 13996868 - Exonic hg19 SARC TCGA-MJ-A68H-01A 2 5 In-Frame Intra-chr p13.11 p13.12 Seq+ 45165 ChimerSeq STARFusion TCGA_RNA-Seq CHSY3-HSPA8P4 CHSY3 chr5 129244053 + HSPA8P4 chr5 129476585 + Exonic hg19 SARC TCGA-DX-A3UE-01A 5 21 Out-of-frame Intra-chr q23.3 q23.3 45166 ChimerSeq STARFusion TCGA_RNA-Seq DOT1L-SSBP3 DOT1L chr19 2164264 + SSBP3 chr1 54694499 - Exonic hg19 SARC TCGA-K1-A3PO-01A 8 44 In-Frame Inter-chr p13.3 Oncogene Transcription factor p32.3 Seq+ 45167 ChimerSeq STARFusion TCGA_RNA-Seq SCMH1-CASP9 SCMH1 chr1 41707731 - CASP9 chr1 15844890 - Exonic hg19 SARC TCGA-K1-A3PO-01A 12 20 5'UTR-5'UTR Intra-chr p34.2 Transcription factor p36.21 Seq+ 45168 ChimerSeq STARFusion TCGA_RNA-Seq CALM2-TTC7A CALM2 chr2 47397873 - TTC7A chr2 47233061 + Exonic hg19 SARC TCGA-K1-A3PO-01A 3 49 Out-of-frame Intra-chr p21 p21 Seq+ 45169 ChimerSeq STARFusion TCGA_RNA-Seq PRKD3-TMEM51 PRKD3 chr2 37520276 - TMEM51 chr1 15536986 + Exonic hg19 SARC TCGA-K1-A3PO-01A 2 17 CDS-5'UTR Inter-chr p22.2 p36.21 Seq+ 45170 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP35-CALM2 ARHGAP35 chr19 47440665 + CALM2 chr2 47397903 - Exonic hg19 SARC TCGA-K1-A3PO-01A 3 4 Out-of-frame Inter-chr q13.32 Transcription factor p21 Seq+ 45171 ChimerSeq STARFusion TCGA_RNA-Seq THRB-CALM2 THRB chr3 24378791 - CALM2 chr2 47389801 - Exonic hg19 SARC TCGA-K1-A3PO-01A 2 3 5'UTR-CDS Inter-chr p24.2 Tumor suppressor gene Transcription factor p21 45172 ChimerSeq STARFusion TCGA_RNA-Seq CAST-GLRX CAST chr5 96038619 + GLRX chr5 95152330 - Exonic hg19 SARC TCGA-K1-A3PO-01A 2 1 5'UTR-CDS Intra-chr q15 q15 45173 ChimerSeq STARFusion TCGA_RNA-Seq MED26-PLCB1 MED26 chr19 16738683 - PLCB1 chr20 8608941 + Exonic hg19 SARC TCGA-3B-A9HI-01A 14 34 In-Frame Inter-chr p13.11 p12.3 Seq+ 45174 ChimerSeq STARFusion TCGA_RNA-Seq SETD2-CCRL2 SETD2 chr3 47139445 - CCRL2 chr3 46448880 + Exonic hg19 SARC TCGA-DX-AB2P-01A 59 142 CDS-5'UTR Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Seq+ 45175 ChimerSeq STARFusion TCGA_RNA-Seq FBN1-URI1 FBN1 chr15 48936803 - URI1 chr19 30476130 + Exonic hg19 SARC TCGA-DX-AB2P-01A 34 87 In-Frame Inter-chr q21.1 q12 Seq+ 45176 ChimerSeq STARFusion TCGA_RNA-Seq SPEN-PLEKHM2 SPEN chr1 16203173 + PLEKHM2 chr1 16060292 + Exonic hg19 SARC TCGA-DX-AB2P-01A 25 69 Out-of-frame Intra-chr p36.21 Transcription factor p36.21 Seq+ 45177 ChimerSeq STARFusion TCGA_RNA-Seq ZNF507-FXYD1 ZNF507 chr19 32851524 + FXYD1 chr19 35630980 + Exonic hg19 SARC TCGA-DX-AB2P-01A 6 28 CDS-5'UTR Intra-chr q13.11 Transcription factor q13.12 Seq+ 45178 ChimerSeq STARFusion TCGA_RNA-Seq RB1-DIAPH3 RB1 chr13 48881542 + DIAPH3 chr13 60707123 - Exonic hg19 SARC TCGA-DX-AB2P-01A 7 21 In-Frame Intra-chr q14.2 Oncogene Tumor suppressor gene q21.2 Seq+ 45179 ChimerSeq STARFusion TCGA_RNA-Seq EPN2-PIBF1 EPN2 chr17 19140844 + PIBF1 chr13 73467922 + Exonic hg19 SARC TCGA-DX-AB2P-01A 5 13 5'UTR-CDS Inter-chr p11.2 q21.33 Seq+ 45180 ChimerSeq STARFusion TCGA_RNA-Seq KDELC2-TAF1D KDELC2 chr11 108368892 - TAF1D chr11 93476064 - Exonic hg19 SARC TCGA-DX-AB2P-01A 4 17 CDS-5'UTR Intra-chr q22.3 q21 Seq+ 45181 ChimerSeq STARFusion TCGA_RNA-Seq DDX10-AIPL1 DDX10 chr11 108594189 + AIPL1 chr17 6331826 - Exonic hg19 SARC TCGA-DX-AB2P-01A 2 24 In-Frame Inter-chr q22.3 p13.2 Seq+ 45182 ChimerSeq STARFusion TCGA_RNA-Seq KLF12-CCDC144A KLF12 chr13 74518118 - CCDC144A chr17 16699357 + Exonic hg19 SARC TCGA-DX-AB2P-01A 3 16 CDS-3'UTR Inter-chr q22.1 Transcription factor p11.2 45183 ChimerSeq STARFusion TCGA_RNA-Seq KLF12-USP32P1 KLF12 chr13 74518118 - USP32P1 chr17 16699357 + Exonic hg19 SARC TCGA-DX-AB2P-01A 3 16 CDS-5'UTR Inter-chr q22.1 Transcription factor p11.2 Seq+ 45184 ChimerSeq STARFusion TCGA_RNA-Seq HIF1A-C14orf37 HIF1A chr14 62162557 + C14orf37 chr14 58606132 - Exonic hg19 SARC TCGA-DX-AB2P-01A 4 10 CDS-5'UTR Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 Seq+ 45185 ChimerSeq STARFusion TCGA_RNA-Seq ESD-FAM124A ESD chr13 47367532 - FAM124A chr13 51825604 + Exonic hg19 SARC TCGA-DX-AB2P-01A 4 9 5'UTR-CDS Intra-chr q14.2 q14.3 Seq+ 45186 ChimerSeq STARFusion TCGA_RNA-Seq KLF12-USP32P1 KLF12 chr13 74518118 - USP32P1 chr17 16695141 + Exonic hg19 SARC TCGA-DX-AB2P-01A 2 16 CDS-5'UTR Inter-chr q22.1 Transcription factor p11.2 Seq+ 45187 ChimerSeq STARFusion TCGA_RNA-Seq EPN2-PIBF1 EPN2 chr17 19140844 + PIBF1 chr13 73482669 + Exonic hg19 SARC TCGA-DX-AB2P-01A 2 13 5'UTR-CDS Inter-chr p11.2 q21.33 Seq+ 45188 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS17-SLC12A1 ADAMTS17 chr15 100871094 - SLC12A1 chr15 48548008 + Exonic hg19 SARC TCGA-DX-AB2P-01A 2 8 In-Frame Intra-chr q26.3 q21.1 Seq+ 45189 ChimerSeq STARFusion TCGA_RNA-Seq TIPIN-ATP8B4 TIPIN chr15 66648977 - ATP8B4 chr15 50226379 - Exonic hg19 SARC TCGA-DX-AB2P-01A 3 3 5'UTR-CDS Intra-chr q22.31 q21.2 Seq+ 45190 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-ACER3 UVRAG chr11 75728024 + ACER3 chr11 76726060 + Exonic hg19 SARC TCGA-DX-AB2P-01A 2 6 In-Frame Intra-chr q13.5 Tumor suppressor gene q13.5 Seq+ 45191 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-PRPSAP1 FAM222B chr17 27169700 - PRPSAP1 chr17 74309972 - Exonic hg19 SARC TCGA-3B-A9HZ-01A 12 41 5'UTR-CDS Intra-chr q11.2 q25.1 Seq+ 45192 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-PRPSAP1 FAM222B chr17 27139227 - PRPSAP1 chr17 74309972 - Exonic hg19 SARC TCGA-3B-A9HZ-01A 7 41 5'UTR-CDS Intra-chr q11.2 q25.1 Seq+ 45193 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-PRPSAP1 FAM222B chr17 27161311 - PRPSAP1 chr17 74309972 - Exonic hg19 SARC TCGA-3B-A9HZ-01A 2 41 5'UTR-CDS Intra-chr q11.2 q25.1 Seq+ 45194 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-PRPSAP1 FAM222B chr17 27139176 - PRPSAP1 chr17 74309972 - Exonic hg19 SARC TCGA-3B-A9HZ-01A 2 41 5'UTR-CDS Intra-chr q11.2 q25.1 Seq+ 45195 ChimerSeq STARFusion TCGA_RNA-Seq PAN3-MICU2 PAN3 chr13 28794515 + MICU2 chr13 22096789 - Exonic hg19 SARC TCGA-3B-A9HZ-01A 9 5 Out-of-frame Intra-chr q12.2 q12.11 Seq+ 45196 ChimerSeq STARFusion TCGA_RNA-Seq PIEZO2-IMPA2 PIEZO2 chr18 10672687 - IMPA2 chr18 12030342 + Exonic hg19 SARC TCGA-3B-A9HZ-01A 5 19 Out-of-frame Intra-chr p11.21 p11.21 Seq+ 45197 ChimerSeq STARFusion TCGA_RNA-Seq ARFGEF2-TTLL9 ARFGEF2 chr20 47634087 + TTLL9 chr20 30510766 + Exonic hg19 SARC TCGA-3B-A9HZ-01A 7 8 In-Frame Intra-chr q13.13 q11.21 Seq+ 45198 ChimerSeq STARFusion TCGA_RNA-Seq C1QC-CACNB3 C1QC chr1 22974547 + CACNB3 chr12 49218616 + Exonic hg19 SARC TCGA-3B-A9HZ-01A 9 0 Out-of-frame Inter-chr p36.12 q13.12 45199 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC20-IGH@ ZDHHC20 chr13 22033193 - IGH@ chr14 107283096 - Exonic hg19 SARC TCGA-3B-A9HZ-01A 3 6 Out-of-frame Inter-chr q12.11 32.33 45200 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K14-SRP68 MAP3K14 chr17 43362179 - SRP68 chr17 74063411 - Exonic hg19 SARC TCGA-3B-A9HZ-01A 2 8 In-Frame Intra-chr q21.31 q25.1 Seq+ 45201 ChimerSeq STARFusion TCGA_RNA-Seq ACACA-PARD6G ACACA chr17 35715942 - PARD6G chr18 77960815 - Exonic hg19 SARC TCGA-3B-A9HZ-01A 2 5 5'UTR-CDS Inter-chr q23 Seq+ 45202 ChimerSeq STARFusion TCGA_RNA-Seq KLHL1-HNRNPF KLHL1 chr13 70370870 - HNRNPF chr10 43892038 - Exonic hg19 SARC TCGA-PC-A5DK-01A 2 8 CDS-5'UTR Inter-chr q21.33 q11.21 Seq+ 45203 ChimerSeq STARFusion TCGA_RNA-Seq DLG4-KRT8 DLG4 chr17 7120437 - KRT8 chr12 53298811 - Exonic hg19 SARC TCGA-KD-A5QU-01A 9 63 Out-of-frame Inter-chr p13.1 Tumor suppressor gene q13.13 Seq+ 45204 ChimerSeq STARFusion TCGA_RNA-Seq TP53-DUS3L TP53 chr17 7590695 - DUS3L chr19 5788409 - Exonic hg19 SARC TCGA-KD-A5QU-01A 7 56 5'UTR-CDS Inter-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.3 Seq+ 45205 ChimerSeq STARFusion TCGA_RNA-Seq DLG4-KRT8 DLG4 chr17 7120437 - KRT8 chr12 53298829 - Exonic hg19 SARC TCGA-KD-A5QU-01A 3 63 CDS-5'UTR Inter-chr p13.1 Tumor suppressor gene q13.13 Seq+ 45206 ChimerSeq STARFusion TCGA_RNA-Seq TP53-DUS3L TP53 chr17 7590695 - DUS3L chr19 5788187 - Exonic hg19 SARC TCGA-KD-A5QU-01A 3 56 5'UTR-CDS Inter-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.3 Seq+ 45207 ChimerSeq STARFusion TCGA_RNA-Seq MAST2-NASP MAST2 chr1 46295253 + NASP chr1 46078841 + Exonic hg19 SARC TCGA-KD-A5QU-01A 2 19 Out-of-frame Intra-chr p34.1 AGC:MAST p34.1 Seq+ 45208 ChimerSeq STARFusion TCGA_RNA-Seq DMD-FN1 DMD chrX 31526329 - FN1 chr2 216230250 - Exonic hg19 SARC TCGA-KD-A5QU-01A 4 1 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q35 Oncogene 45209 ChimerSeq STARFusion TCGA_RNA-Seq RSU1-DDX11L2 RSU1 chr10 16824033 - DDX11L2 chr2 114359006 - Exonic hg19 SARC TCGA-KD-A5QU-01A 3 5 CDS-3'UTR Inter-chr p13 q14.1 45210 ChimerSeq STARFusion TCGA_RNA-Seq ROCK1-LAMP5 ROCK1 chr18 18619433 - LAMP5 chr20 9510289 + Exonic hg19 SARC TCGA-DX-AB2F-01A 21 40 In-Frame Inter-chr q11.1 AGC:DMPK p12.2 Seq+ 45211 ChimerSeq STARFusion TCGA_RNA-Seq SS18-SSX1 SS18 chr18 23612363 - SSX1 chrX 48123217 + Exonic hg19 SARC TCGA-X6-A8C7-01A 85 344 In-Frame Inter-chr q11.2 p11.23 Oncogene KB Pub Seq+ 45212 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP1-DNM3OS CTDSP1 chr2 219267128 + DNM3OS chr1 172113577 - Exonic hg19 SARC TCGA-X6-A8C7-01A 2 3 CDS-3'UTR Inter-chr q35 q24.3 45213 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-SYK MDM2 chr12 69203072 + SYK chr9 93657810 + Exonic hg19 SARC TCGA-DX-A3M1-01A 235 998 Out-of-frame Inter-chr q15 Oncogene q22.2 TK:Syk Oncogene Tumor suppressor gene Seq+ 45214 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP2-AUH CTDSP2 chr12 58240155 - AUH chr9 93976707 - Exonic hg19 SARC TCGA-DX-A3M1-01A 150 442 Out-of-frame Inter-chr q14.1 q22.31 Seq+ 45215 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-C12orf55 FRS2 chr12 69864310 + C12orf55 chr12 97098521 + Exonic hg19 SARC TCGA-DX-A3M1-01A 37 492 Out-of-frame Intra-chr q15 45216 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-C12orf55 FRS2 chr12 69864310 + C12orf55 chr12 97093749 + Exonic hg19 SARC TCGA-DX-A3M1-01A 31 492 Out-of-frame Intra-chr q15 45217 ChimerSeq STARFusion TCGA_RNA-Seq XPOT-LYZ XPOT chr12 64838911 + LYZ chr12 69743888 + Exonic hg19 SARC TCGA-DX-A3M1-01A 27 262 Out-of-frame Intra-chr q14.2 q15 Seq+ 45218 ChimerSeq STARFusion TCGA_RNA-Seq ST6GALNAC6-NUP107 ST6GALNAC6 chr9 130649763 - NUP107 chr12 69135593 + Exonic hg19 SARC TCGA-DX-A3M1-01A 4 344 Out-of-frame Inter-chr q34.11 q15 Seq+ 45219 ChimerSeq STARFusion TCGA_RNA-Seq NEDD1-TMTC2 NEDD1 chr12 97331171 + TMTC2 chr12 83358803 + Exonic hg19 SARC TCGA-DX-A3M1-01A 34 183 Out-of-frame Intra-chr q23.1 q21.31 Seq+ 45220 ChimerSeq STARFusion TCGA_RNA-Seq NTN4-NUP107 NTN4 chr12 96131644 - NUP107 chr12 69135593 + Exonic hg19 SARC TCGA-DX-A3M1-01A 22 104 In-Frame Intra-chr q22 q15 Seq+ 45221 ChimerSeq STARFusion TCGA_RNA-Seq CRAT-TTLL11 CRAT chr9 131859529 - TTLL11 chr9 124633027 - Exonic hg19 SARC TCGA-DX-A3M1-01A 19 62 Out-of-frame Intra-chr q34.11 q33.2 Seq+ 45222 ChimerSeq STARFusion TCGA_RNA-Seq CPQ-MATN2 CPQ chr8 97797558 + MATN2 chr8 98943181 + Exonic hg19 SARC TCGA-DX-A3M1-01A 19 59 In-Frame Intra-chr q22.1 q22.1 Seq+ 45223 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-CASC17 TANC2 chr17 61228741 + CASC17 chr17 69181796 - Exonic hg19 SARC TCGA-DX-A3M1-01A 16 54 Out-of-frame Intra-chr q23.2 q24.3 Seq+ 45224 ChimerSeq STARFusion TCGA_RNA-Seq MPRIP-TNFRSF13B MPRIP chr17 16946285 + TNFRSF13B chr17 16855897 - Exonic hg19 SARC TCGA-DX-A3M1-01A 10 75 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 45225 ChimerSeq STARFusion TCGA_RNA-Seq HMGA2-NR2C1 HMGA2 chr12 66232349 + NR2C1 chr12 95461167 - Exonic hg19 SARC TCGA-DX-A3M1-01A 20 31 CDS-5'UTR Intra-chr q14.3 Transcription factor q22 Transcription factor Seq+ 45226 ChimerSeq STARFusion TCGA_RNA-Seq MPRIP-TNFRSF13B MPRIP chr17 16946285 + TNFRSF13B chr17 16852297 - Exonic hg19 SARC TCGA-DX-A3M1-01A 8 75 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 45227 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-CASC17 TANC2 chr17 61176718 + CASC17 chr17 69181796 - Exonic hg19 SARC TCGA-DX-A3M1-01A 12 54 Out-of-frame Intra-chr q23.2 q24.3 Seq+ 45228 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-HMGA2 FRS2 chr12 69864310 + HMGA2 chr12 66232299 + Exonic hg19 SARC TCGA-DX-A3M1-01A 12 34 5'UTR-CDS Intra-chr q15 q14.3 Transcription factor Seq+ 45229 ChimerSeq STARFusion TCGA_RNA-Seq CASC3-HNF1B CASC3 chr17 38297860 + HNF1B chr17 36047395 - Exonic hg19 SARC TCGA-DX-A3M1-01A 8 45 In-Frame Intra-chr q21.1 q12 Transcription factor Seq+ 45230 ChimerSeq STARFusion TCGA_RNA-Seq NDUFA12-ST6GALNAC6 NDUFA12 chr12 95387946 - ST6GALNAC6 chr9 130658611 - Exonic hg19 SARC TCGA-DX-A3M1-01A 6 53 In-Frame Inter-chr q22 q34.11 Seq+ 45231 ChimerSeq STARFusion TCGA_RNA-Seq FAM129B-C16orf62 FAM129B chr9 130285958 - C16orf62 chr16 19702675 + Exonic hg19 SARC TCGA-DX-A3M1-01A 8 36 In-Frame Inter-chr q34.11 p12.3 Seq+ 45232 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-CASC17 TANC2 chr17 61176607 + CASC17 chr17 69181796 - Exonic hg19 SARC TCGA-DX-A3M1-01A 3 54 Out-of-frame Intra-chr q23.2 q24.3 Seq+ 45233 ChimerSeq STARFusion TCGA_RNA-Seq LAMA2-UQCRB LAMA2 chr6 129691135 + UQCRB chr8 97245455 - Exonic hg19 SARC TCGA-DX-A3M1-01A 3 48 Out-of-frame Inter-chr q22.33 q22.1 Seq+ 45234 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-STAU2 VPS13B chr8 100050794 + STAU2 chr8 74334937 - Exonic hg19 SARC TCGA-DX-A3M1-01A 2 46 In-Frame Intra-chr q22.2 q21.11 Seq+ 45235 ChimerSeq STARFusion TCGA_RNA-Seq VEZT-C12orf29 VEZT chr12 95645847 + C12orf29 chr12 88433925 + Exonic hg19 SARC TCGA-DX-A3M1-01A 3 40 In-Frame Intra-chr q22 Tumor suppressor gene q21.32 Seq+ 45236 ChimerSeq STARFusion TCGA_RNA-Seq CEP290-VEZT CEP290 chr12 88486458 - VEZT chr12 95645716 + Exonic hg19 SARC TCGA-DX-A3M1-01A 6 27 Out-of-frame Intra-chr q21.32 q22 Tumor suppressor gene Seq+ 45237 ChimerSeq STARFusion TCGA_RNA-Seq LIN7A-RPSAP52 LIN7A chr12 81283030 - RPSAP52 chr12 66152811 - Exonic hg19 SARC TCGA-DX-A3M1-01A 8 18 CDS-3'UTR Intra-chr q21.31 q14.3 Seq+ 45238 ChimerSeq STARFusion TCGA_RNA-Seq WWP1-UTP23 WWP1 chr8 87443972 + UTP23 chr8 117861127 + Exonic hg19 SARC TCGA-DX-A3M1-01A 3 37 CDS-3'UTR Intra-chr q21.3 q24.11 Seq+ 45239 ChimerSeq STARFusion TCGA_RNA-Seq WWP1-UTP23 WWP1 chr8 87443972 + UTP23 chr8 117783695 + Exonic hg19 SARC TCGA-DX-A3M1-01A 2 37 Out-of-frame Intra-chr q21.3 q24.11 Seq+ 45240 ChimerSeq STARFusion TCGA_RNA-Seq EDA-TEX11 EDA chrX 68836548 + TEX11 chrX 70093157 - Exonic hg19 SARC TCGA-DX-A3M1-01A 3 31 In-Frame Intra-chr q13.1 q13.1 Seq+ 45241 ChimerSeq STARFusion TCGA_RNA-Seq HMGA2-NR2C1 HMGA2 chr12 66232349 + NR2C1 chr12 95461163 - Exonic hg19 SARC TCGA-DX-A3M1-01A 3 31 CDS-5'UTR Intra-chr q14.3 Transcription factor q22 Transcription factor Seq+ 45242 ChimerSeq STARFusion TCGA_RNA-Seq TNFRSF13B-MPRIP TNFRSF13B chr17 16842970 - MPRIP chr17 16960950 + Exonic hg19 SARC TCGA-DX-A3M1-01A 2 35 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 45243 ChimerSeq STARFusion TCGA_RNA-Seq TNFRSF13B-MPRIP TNFRSF13B chr17 16852052 - MPRIP chr17 16960950 + Exonic hg19 SARC TCGA-DX-A3M1-01A 2 35 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 45244 ChimerSeq STARFusion TCGA_RNA-Seq VPS53-TXNDC17 VPS53 chr17 559078 - TXNDC17 chr17 6545073 + Exonic hg19 SARC TCGA-DX-A3M1-01A 7 10 Out-of-frame Intra-chr Tumor suppressor gene p13.1 Seq+ 45245 ChimerSeq STARFusion TCGA_RNA-Seq CEP290-VEZT CEP290 chr12 88487547 - VEZT chr12 95645716 + Exonic hg19 SARC TCGA-DX-A3M1-01A 2 27 In-Frame Intra-chr q21.32 q22 Tumor suppressor gene Seq+ 45246 ChimerSeq STARFusion TCGA_RNA-Seq ST6GALNAC6-PAWR ST6GALNAC6 chr9 130656791 - PAWR chr12 79990438 - Exonic hg19 SARC TCGA-DX-A3M1-01A 4 19 Out-of-frame Inter-chr q34.11 q21.2 Tumor suppressor gene Seq+ 45247 ChimerSeq STARFusion TCGA_RNA-Seq TTC28-TEF TTC28 chr22 28492178 - TEF chr22 41794843 + Exonic hg19 SARC TCGA-DX-A3M1-01A 4 19 CDS-3'UTR Intra-chr q12.1 q13.2 Transcription factor Seq+ 45248 ChimerSeq STARFusion TCGA_RNA-Seq ZHX2-GPRC6A ZHX2 chr8 123794185 + GPRC6A chr6 117150119 - Exonic hg19 SARC TCGA-DX-A3M1-01A 3 17 5'UTR-CDS Inter-chr q24.13 Tumor suppressor gene Transcription factor q22.1 Seq+ 45249 ChimerSeq STARFusion TCGA_RNA-Seq NTN4-TRHDE NTN4 chr12 96104219 - TRHDE chr12 72680461 + Exonic hg19 SARC TCGA-DX-A3M1-01A 4 12 Out-of-frame Intra-chr q22 q21.1 Seq+ 45250 ChimerSeq STARFusion TCGA_RNA-Seq MRPL42-NTN4 MRPL42 chr12 93861330 + NTN4 chr12 96131922 - Exonic hg19 SARC TCGA-DX-A3M1-01A 5 5 5'UTR-CDS Intra-chr q22 q22 Seq+ 45251 ChimerSeq STARFusion TCGA_RNA-Seq NDUFB9-CSMD3 NDUFB9 chr8 125555520 + CSMD3 chr8 114327022 - Exonic hg19 SARC TCGA-DX-A3M1-01A 4 8 Out-of-frame Intra-chr q24.13 q23.3 Oncogene Seq+ 45252 ChimerSeq STARFusion TCGA_RNA-Seq ABCA9-CEP112 ABCA9 chr17 67020355 - CEP112 chr17 63685336 - Exonic hg19 SARC TCGA-DX-A3M1-01A 3 9 Out-of-frame Intra-chr q24.2 q24.1 Seq+ 45253 ChimerSeq STARFusion TCGA_RNA-Seq TMTC3-SLC35E3 TMTC3 chr12 88536264 + SLC35E3 chr12 69152937 + Exonic hg19 SARC TCGA-DX-A3M1-01A 2 13 5'UTR-CDS Intra-chr q21.32 q15 Seq+ 45254 ChimerSeq STARFusion TCGA_RNA-Seq TMTC2-BTBD11 TMTC2 chr12 83290425 + BTBD11 chr12 108029062 + Exonic hg19 SARC TCGA-DX-A3M1-01A 2 12 Out-of-frame Intra-chr q21.31 q23.3 Seq+ 45255 ChimerSeq STARFusion TCGA_RNA-Seq SYNRG-ADAP2 SYNRG chr17 35921297 - ADAP2 chr17 29248722 + Exonic hg19 SARC TCGA-DX-A3M1-01A 3 2 CDS-5'UTR Intra-chr q11.2 45256 ChimerSeq STARFusion TCGA_RNA-Seq AUH-CPM AUH chr9 94058303 - CPM chr12 69265736 - Exonic hg19 SARC TCGA-DX-A3M1-01A 2 5 Out-of-frame Inter-chr q22.31 q15 Seq+ 45257 ChimerSeq STARFusion TCGA_RNA-Seq C12orf56-APPL2 C12orf56 chr12 64784094 - APPL2 chr12 105593309 - Exonic hg19 SARC TCGA-DX-A3M1-01A 2 5 Out-of-frame Intra-chr q14.2 q23.3 Seq+ 45258 ChimerSeq STARFusion TCGA_RNA-Seq CCNT2-ACMSD CCNT2 chr2 135677461 + ACMSD chr2 135655911 + Exonic hg19 SARC TCGA-DX-A3M1-01A 2 4 In-Frame Intra-chr q21.3 q21.3 Seq+ 45259 ChimerSeq STARFusion TCGA_RNA-Seq METTL16-CLEC10A METTL16 chr17 2339968 - CLEC10A chr17 6982204 - Exonic hg19 SARC TCGA-DX-A3M1-01A 2 4 CDS-5'UTR Intra-chr p13.3 p13.1 Seq+ 45260 ChimerSeq STARFusion TCGA_RNA-Seq CSMD3-ADCY8 CSMD3 chr8 114290821 - ADCY8 chr8 131964244 - Exonic hg19 SARC TCGA-DX-A3M1-01A 2 3 CDS-5'UTR Intra-chr q23.3 Oncogene q24.22 Seq+ 45261 ChimerSeq STARFusion TCGA_RNA-Seq TTLL11-C12orf42 TTLL11 chr9 124622616 - C12orf42 chr12 103657149 - Exonic hg19 SARC TCGA-DX-A3M1-01A 2 3 CDS-3'UTR Inter-chr q33.2 q23.2 Seq+ 45262 ChimerSeq STARFusion TCGA_RNA-Seq STAB2-HMGA2 STAB2 chr12 104014331 + HMGA2 chr12 66345163 + Exonic hg19 SARC TCGA-DX-A3M1-01A 2 1 In-Frame Intra-chr q23.3 q14.3 Transcription factor 45263 ChimerSeq STARFusion TCGA_RNA-Seq PLXNC1-CCDC41 PLXNC1 chr12 94659001 + CCDC41 chr12 94706793 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 177 766 In-Frame Intra-chr q22 Tumor suppressor gene Seq+ 45264 ChimerSeq STARFusion TCGA_RNA-Seq HSP90B1-TMEM19 HSP90B1 chr12 104328065 + TMEM19 chr12 72083371 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 107 520 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q21.1 Seq+ 45265 ChimerSeq STARFusion TCGA_RNA-Seq FBXL7-NRD1 FBXL7 chr5 15616181 + NRD1 chr1 52299842 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 53 441 In-Frame Inter-chr p15.1 Seq+ 45266 ChimerSeq STARFusion TCGA_RNA-Seq MOK-MUCL1 MOK chr14 102771299 - MUCL1 chr12 55248900 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 39 369 In-Frame Inter-chr q32.31 CMGC:RCK q13.2 Seq+ 45267 ChimerSeq STARFusion TCGA_RNA-Seq MOK-MUCL1 MOK chr14 102771299 - MUCL1 chr12 55250554 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 39 369 In-Frame Inter-chr q32.31 CMGC:RCK q13.2 Seq+ 45268 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D15-LYZ TBC1D15 chr12 72300918 + LYZ chr12 69743888 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 34 346 In-Frame Intra-chr q21.1 q15 45269 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-CPM FRS2 chr12 69864310 + CPM chr12 69279669 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 17 402 5'UTR-CDS Intra-chr q15 q15 Seq+ 45270 ChimerSeq STARFusion TCGA_RNA-Seq GLT8D2-YY1 GLT8D2 chr12 104396913 - YY1 chr14 100741035 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 54 249 In-Frame Inter-chr q23.3 q32.2 Transcription factor Seq+ 45271 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-CPM FRS2 chr12 69864310 + CPM chr12 69265736 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 12 402 5'UTR-CDS Intra-chr q15 q15 Seq+ 45272 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R13B-WIBG PPP1R13B chr14 104313636 - WIBG chr12 56297264 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 30 66 Out-of-frame Inter-chr q32.33 12q13.2 Seq+ 45273 ChimerSeq STARFusion TCGA_RNA-Seq PDCD6-FRS2 PDCD6 chr5 272887 + FRS2 chr12 69965056 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 12 132 In-Frame Inter-chr p15.33 q15 Seq+ 45274 ChimerSeq STARFusion TCGA_RNA-Seq RAP1B-SCYL2 RAP1B chr12 69004832 + SCYL2 chr12 100711581 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 3 167 5'UTR-CDS Intra-chr q15 q23.1 Other:SCY1 Seq+ 45275 ChimerSeq STARFusion TCGA_RNA-Seq RAP1B-SCYL2 RAP1B chr12 69004823 + SCYL2 chr12 100711581 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 2 167 5'UTR-CDS Intra-chr q15 q23.1 Other:SCY1 Seq+ 45276 ChimerSeq STARFusion TCGA_RNA-Seq GNPTAB-TRHDE GNPTAB chr12 102224337 - TRHDE chr12 72680461 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 20 65 Out-of-frame Intra-chr q23.2 q21.1 Seq+ 45277 ChimerSeq STARFusion TCGA_RNA-Seq YY1-TESPA1 YY1 chr14 100706260 + TESPA1 chr12 55344174 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 12 62 CDS-3'UTR Inter-chr q32.2 Transcription factor q13.2 Seq+ 45278 ChimerSeq STARFusion TCGA_RNA-Seq CHST11-PTPRR CHST11 chr12 104995769 + PTPRR chr12 71158558 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 4 80 In-Frame Intra-chr q23.3 q15 Seq+ 45279 ChimerSeq STARFusion TCGA_RNA-Seq APPL2-TUBA1C APPL2 chr12 105622903 - TUBA1C chr12 49663248 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 9 44 In-Frame Intra-chr q23.3 q13.12 Seq+ 45280 ChimerSeq STARFusion TCGA_RNA-Seq DAB1-DRAM1 DAB1 chr1 58715912 - DRAM1 chr12 102291641 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 13 27 5'UTR-CDS Inter-chr p32.1 q23.2 Seq+ 45281 ChimerSeq STARFusion TCGA_RNA-Seq SPRYD4-MDM1 SPRYD4 chr12 56863187 + MDM1 chr12 68719355 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 6 40 Out-of-frame Intra-chr q13.3 q15 Seq+ 45282 ChimerSeq STARFusion TCGA_RNA-Seq STAT2-B4GALNT1 STAT2 chr12 56753842 - B4GALNT1 chr12 58025916 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 7 33 5'UTR-5'UTR Intra-chr q13.3 Transcription factor q13.3 Seq+ 45283 ChimerSeq STARFusion TCGA_RNA-Seq CCDC127-MUCL1 CCDC127 chr5 216844 - MUCL1 chr12 55250554 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 3 48 In-Frame Inter-chr p15.33 q13.2 Seq+ 45284 ChimerSeq STARFusion TCGA_RNA-Seq SPRED1-TMCO5B SPRED1 chr15 38545418 + TMCO5B chr15 33538814 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 12 9 CDS-3'UTR Intra-chr q14 q13.3 Seq+ 45285 ChimerSeq STARFusion TCGA_RNA-Seq CCDC127-MUCL1 CCDC127 chr5 216844 - MUCL1 chr12 55248900 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 2 48 In-Frame Inter-chr p15.33 q13.2 Seq+ 45286 ChimerSeq STARFusion TCGA_RNA-Seq YEATS4-AGAP2 YEATS4 chr12 69759664 + AGAP2 chr12 58127956 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 3 38 In-Frame Intra-chr q15 q14.1 Seq+ 45287 ChimerSeq STARFusion TCGA_RNA-Seq SPRYD4-MDM1 SPRYD4 chr12 56862460 + MDM1 chr12 68717020 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 2 40 Out-of-frame Intra-chr q13.3 q15 Seq+ 45288 ChimerSeq STARFusion TCGA_RNA-Seq RAB21-MYBPC1 RAB21 chr12 72149068 + MYBPC1 chr12 102023212 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 3 32 Out-of-frame Intra-chr q21.1 q23.2 Seq+ 45289 ChimerSeq STARFusion TCGA_RNA-Seq RAB21-MYBPC1 RAB21 chr12 72149068 + MYBPC1 chr12 102008274 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 3 32 Out-of-frame Intra-chr q21.1 q23.2 Seq+ 45290 ChimerSeq STARFusion TCGA_RNA-Seq TRHDE-TBC1D15 TRHDE chr12 72771901 + TBC1D15 chr12 72287002 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 5 22 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 45291 ChimerSeq STARFusion TCGA_RNA-Seq CHPT1-TXNRD1 CHPT1 chr12 102091912 + TXNRD1 chr12 104707023 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 4 23 In-Frame Intra-chr q23.2 q23.3 Seq+ 45292 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC2-RBMS2 SMARCC2 chr12 56557364 - RBMS2 chr12 56956201 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 5 17 3'UTR-CDS Intra-chr q13.2 q13.3 45293 ChimerSeq STARFusion TCGA_RNA-Seq AHRR-AVIL AHRR chr5 376831 + AVIL chr12 58193703 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 3 23 In-Frame Inter-chr p15.33 Tumor suppressor gene Transcription factor q14.1 Seq+ 45294 ChimerSeq STARFusion TCGA_RNA-Seq YEATS4-ARHGEF25 YEATS4 chr12 69764755 + ARHGEF25 chr12 58008114 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 2 17 Out-of-frame Intra-chr q15 q13.3 Seq+ 45295 ChimerSeq STARFusion TCGA_RNA-Seq FAM19A2-TMBIM4 FAM19A2 chr12 62147403 - TMBIM4 chr12 66547228 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 4 5 Out-of-frame Intra-chr q14.1 q14.3 Seq+ 45296 ChimerSeq STARFusion TCGA_RNA-Seq SARNP-NT5DC3 SARNP chr12 56188143 - NT5DC3 chr12 104200707 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 2 13 Out-of-frame Intra-chr q13.2 q23.3 Seq+ 45297 ChimerSeq STARFusion TCGA_RNA-Seq FAM19A2-TMBIM4 FAM19A2 chr12 62147403 - TMBIM4 chr12 66547228 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 4 4 Out-of-frame Intra-chr q14.1 q14.3 Seq+ 45298 ChimerSeq STARFusion TCGA_RNA-Seq ITGA7-MYRFL ITGA7 chr12 56089306 - MYRFL chr12 70349143 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 3 7 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q15 Transcription factor Seq+ 45299 ChimerSeq STARFusion TCGA_RNA-Seq NT5DC3-PTPRR NT5DC3 chr12 104208715 - PTPRR chr12 71158558 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 2 7 In-Frame Intra-chr q23.3 q15 Seq+ 45300 ChimerSeq STARFusion TCGA_RNA-Seq SLC35E3-TMEM132B SLC35E3 chr12 69145970 + TMEM132B chr12 126068397 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 2 6 In-Frame Intra-chr q15 q24.31 Seq+ 45301 ChimerSeq STARFusion TCGA_RNA-Seq DRAM1-CPM DRAM1 chr12 102271698 + CPM chr12 69357080 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 2 1 CDS-5'UTR Intra-chr q23.2 q15 45302 ChimerSeq STARFusion TCGA_RNA-Seq DRAM1-CPM DRAM1 chr12 102271698 + CPM chr12 69351458 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 2 1 CDS-5'UTR Intra-chr q23.2 q15 45303 ChimerSeq STARFusion TCGA_RNA-Seq BLOC1S1-CPM BLOC1S1 chr12 56110789 + CPM chr12 69279669 - Exonic hg19 SARC TCGA-3B-A9HO-01A 5 45 Out-of-frame Intra-chr q13.2 q15 Seq+ 45304 ChimerSeq STARFusion TCGA_RNA-Seq BLOC1S1-CPM BLOC1S1 chr12 56109980 + CPM chr12 69279669 - Exonic hg19 SARC TCGA-3B-A9HO-01A 2 45 In-Frame Intra-chr q13.2 q15 Seq+ 45305 ChimerSeq STARFusion TCGA_RNA-Seq RBM39-CRYZL1 RBM39 chr20 34304662 - CRYZL1 chr21 34975843 - Exonic hg19 SARC TCGA-3B-A9HO-01A 6 26 Out-of-frame Inter-chr q11.22 q22.11 Seq+ 45306 ChimerSeq STARFusion TCGA_RNA-Seq OR10AE3P-CD63 OR10AE3P chr12 56040398 - CD63 chr12 56122856 - Exonic hg19 SARC TCGA-3B-A9HO-01A 11 3 Out-of-frame Intra-chr q13.2 Seq+ 45307 ChimerSeq STARFusion TCGA_RNA-Seq RASSF3-KRT6B RASSF3 chr12 65004523 + KRT6B chr12 52844404 - Exonic hg19 SARC TCGA-3B-A9HO-01A 3 11 In-Frame Intra-chr q14.2 Tumor suppressor gene q13.13 45308 ChimerSeq STARFusion TCGA_RNA-Seq CDK2-PAN2 CDK2 chr12 56363360 + PAN2 chr12 56719238 - Exonic hg19 SARC TCGA-3B-A9HO-01A 2 9 In-Frame Intra-chr q13.2 CMGC:CDK Tumor suppressor gene q13.3 Seq+ 45309 ChimerSeq STARFusion TCGA_RNA-Seq CEP164P1-C10orf25 CEP164P1 chr10 45637543 - C10orf25 chr10 45495864 - Exonic hg19 SARC TCGA-3B-A9HO-01A 3 4 Out-of-frame Intra-chr q11.21 q11.21 45310 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPAB-SAMM50 HNRNPAB chr5 177634226 + SAMM50 chr22 44371935 + Exonic hg19 SKCM TCGA-BF-A5EQ-01A 124 590 In-Frame Inter-chr q35.3 q13.31 Seq+ 45311 ChimerSeq STARFusion TCGA_RNA-Seq PRAME-ACO2 PRAME chr22 22899232 - ACO2 chr22 41903795 + Exonic hg19 SKCM TCGA-BF-A5EQ-01A 26 146 CDS-5'UTR Intra-chr q13.2 Seq+ 45312 ChimerSeq STARFusion TCGA_RNA-Seq SSBP2-LGALS2 SSBP2 chr5 80911292 - LGALS2 chr22 37967938 - Exonic hg19 SKCM TCGA-BF-A5EQ-01A 8 15 In-Frame Inter-chr q14.1 Tumor suppressor gene q13.1 Seq+ 45313 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-ATXN10 TNRC6B chr22 40574144 + ATXN10 chr22 46125305 + Exonic hg19 SKCM TCGA-BF-A5EQ-01A 6 14 In-Frame Intra-chr q13.1 q13.31 Seq+ 45314 ChimerSeq STARFusion TCGA_RNA-Seq ACO2-TANGO2 ACO2 chr22 41865186 + TANGO2 chr22 20024283 + Exonic hg19 SKCM TCGA-BF-A5EQ-01A 3 16 Out-of-frame Intra-chr q13.2 q11.21 Seq+ 45315 ChimerSeq STARFusion TCGA_RNA-Seq SERF1A-RNF111 SERF1A chr5 69322342 + RNF111 chr15 59358963 + Exonic hg19 SKCM TCGA-BF-A5EQ-01A 3 13 5'UTR-CDS Inter-chr q13.2 q22.1 Tumor suppressor gene 45316 ChimerSeq STARFusion TCGA_RNA-Seq SERF1B-RNF111 SERF1B chr5 69322342 + RNF111 chr15 59358963 + Exonic hg19 SKCM TCGA-BF-A5EQ-01A 3 13 Out-of-frame Inter-chr q22.1 Tumor suppressor gene Seq+ 45317 ChimerSeq STARFusion TCGA_RNA-Seq GFPT2-BRD8 GFPT2 chr5 179780211 - BRD8 chr5 137492956 - Exonic hg19 SKCM TCGA-BF-A5EQ-01A 3 4 Out-of-frame Intra-chr q35.3 q31.2 Seq+ 45318 ChimerSeq STARFusion TCGA_RNA-Seq ZNF253-SLC1A6 ZNF253 chr19 19976808 + SLC1A6 chr19 15083729 - Exonic hg19 SKCM TCGA-BF-A5EQ-01A 2 8 CDS-5'UTR Intra-chr p13.11 Transcription factor p13.12 Seq+ 45319 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D22A-OTUD7A TBC1D22A chr22 47308084 + OTUD7A chr15 31862400 - Exonic hg19 SKCM TCGA-BF-A5EQ-01A 2 3 In-Frame Inter-chr q13.31 q13.3 Seq+ 45320 ChimerSeq STARFusion TCGA_RNA-Seq NUP155-ANKH NUP155 chr5 37370923 - ANKH chr5 14742031 - Exonic hg19 SKCM TCGA-BF-A5ES-01A 11 47 Out-of-frame Intra-chr p13.2 p15.2 Seq+ 45321 ChimerSeq STARFusion TCGA_RNA-Seq NUP155-ANKH NUP155 chr5 37370768 - ANKH chr5 14742031 - Exonic hg19 SKCM TCGA-BF-A5ES-01A 2 47 5'UTR-CDS Intra-chr p13.2 p15.2 Seq+ 45322 ChimerSeq STARFusion TCGA_RNA-Seq C12orf76-IFT81 C12orf76 chr12 110511227 - IFT81 chr12 110618227 + Exonic hg19 SKCM TCGA-ER-A19W-06A 83 414 5'UTR-CDS Intra-chr q24.11 q24.11 Seq+ 45323 ChimerSeq STARFusion TCGA_RNA-Seq MYO5A-TRPM1 MYO5A chr15 52697484 - TRPM1 chr15 31334446 - Exonic hg19 SKCM TCGA-ER-A19W-06A 31 195 In-Frame Intra-chr q21.2 q13.3 Seq+ 45324 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-TPCN2 FCHSD2 chr11 72613588 - TPCN2 chr11 68825046 + Exonic hg19 SKCM TCGA-ER-A19W-06A 13 63 In-Frame Intra-chr q13.4 q13.3 Seq+ 45325 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-FGR WASF2 chr1 27816497 - FGR chr1 27967635 - Exonic hg19 SKCM TCGA-ER-A19W-06A 5 67 5'UTR-5'UTR Intra-chr p36.11 p35.3 TK:Src Seq+ 45326 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-FGR WASF2 chr1 27816497 - FGR chr1 27951662 - Exonic hg19 SKCM TCGA-ER-A19W-06A 4 66 5'UTR-5'UTR Intra-chr p36.11 p35.3 TK:Src Seq+ 45327 ChimerSeq STARFusion TCGA_RNA-Seq CPT1A-SUV420H1 CPT1A chr11 68609243 - SUV420H1 chr11 67942650 - Exonic hg19 SKCM TCGA-ER-A19W-06A 7 14 5'UTR-CDS Intra-chr q13.3 45328 ChimerSeq STARFusion TCGA_RNA-Seq FAM118B-DCPS FAM118B chr11 126081725 + DCPS chr11 126201300 + Exonic hg19 SKCM TCGA-ER-A19W-06A 7 9 5'UTR-CDS Intra-chr q24.2 q24.2 Seq+ 45329 ChimerSeq STARFusion TCGA_RNA-Seq ADCK5-HSF1 ADCK5 chr8 145608431 + HSF1 chr8 145537197 + Exonic hg19 SKCM TCGA-ER-A19W-06A 5 16 In-Frame Intra-chr q24.3 Atypical:ABC1 q24.3 Transcription factor Seq+ 45330 ChimerSeq STARFusion TCGA_RNA-Seq MBNL1-SERP1 MBNL1 chr3 152150709 + SERP1 chr3 150284893 - Exonic hg19 SKCM TCGA-ER-A19W-06A 4 18 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 45331 ChimerSeq STARFusion TCGA_RNA-Seq CLMN-SOS2 CLMN chr14 95786048 - SOS2 chr14 50587102 - Exonic hg19 SKCM TCGA-ER-A19W-06A 4 10 In-Frame Intra-chr q32.13 q21.3 Seq+ 45332 ChimerSeq STARFusion TCGA_RNA-Seq BAGE2-CTBP2P1 BAGE2 chr21 11058161 - CTBP2P1 chrY 59001440 + Exonic hg19 SKCM TCGA-ER-A19W-06A 5 3 Out-of-frame Inter-chr p11.2 45333 ChimerSeq STARFusion TCGA_RNA-Seq CPT1A-SUV420H1 CPT1A chr11 68607020 - SUV420H1 chr11 67942650 - Exonic hg19 SKCM TCGA-ER-A19W-06A 2 14 5'UTR-CDS Intra-chr q13.3 45334 ChimerSeq STARFusion TCGA_RNA-Seq SLC38A10-NPLOC4 SLC38A10 chr17 79263491 - NPLOC4 chr17 79589304 - Exonic hg19 SKCM TCGA-ER-A19W-06A 3 8 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 45335 ChimerSeq STARFusion TCGA_RNA-Seq RASAL2-KIF14 RASAL2 chr1 178252826 + KIF14 chr1 200544819 - Exonic hg19 SKCM TCGA-BF-AAP4-01A 7 34 In-Frame Intra-chr q25.2 Tumor suppressor gene q32.1 Seq+ 45336 ChimerSeq STARFusion TCGA_RNA-Seq CLIC1-NUDT3 CLIC1 chr6 31701343 - NUDT3 chr6 34263462 - Exonic hg19 SKCM TCGA-BF-AAP4-01A 6 11 Out-of-frame Intra-chr p21.31 Seq+ 45337 ChimerSeq STARFusion TCGA_RNA-Seq ITCH-JMJD4 ITCH chr20 33033266 + JMJD4 chr1 227922517 - Exonic hg19 SKCM TCGA-BF-AAP4-01A 5 5 Out-of-frame Inter-chr q11.22 q42.13 Seq+ 45338 ChimerSeq STARFusion TCGA_RNA-Seq ECSIT-ELOF1 ECSIT chr19 11623871 - ELOF1 chr19 11665180 - Exonic hg19 SKCM TCGA-BF-AAP4-01A 2 12 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 45339 ChimerSeq STARFusion TCGA_RNA-Seq PSMB7-PID1 PSMB7 chr9 127146877 - PID1 chr2 229890824 - Exonic hg19 SKCM TCGA-EE-A2MC-06A 49 88 In-Frame Inter-chr q33.3 q36.3 Seq+ 45340 ChimerSeq STARFusion TCGA_RNA-Seq DENND1A-PSMB7 DENND1A chr9 126345448 - PSMB7 chr9 127119194 - Exonic hg19 SKCM TCGA-EE-A2MC-06A 23 108 In-Frame Intra-chr q33.3 q33.3 Seq+ 45341 ChimerSeq STARFusion TCGA_RNA-Seq PSEN1-STK4 PSEN1 chr14 73664837 + STK4 chr20 43703659 + Exonic hg19 SKCM TCGA-EE-A2MC-06A 3 32 Out-of-frame Inter-chr q24.2 q13.12 Seq+ 45342 ChimerSeq STARFusion TCGA_RNA-Seq SON-ITSN1 SON chr21 34948199 + ITSN1 chr21 35153765 + Exonic hg19 SKCM TCGA-DA-A1I7-06A 32 91 In-Frame Intra-chr q22.11 Transcription factor q22.11 Seq+ 45343 ChimerSeq STARFusion TCGA_RNA-Seq ZMYM4-SMYD3 ZMYM4 chr1 35827390 + SMYD3 chr1 246093239 - Exonic hg19 SKCM TCGA-DA-A1I7-06A 5 22 In-Frame Intra-chr p34.3 q44 Transcription factor Seq+ 45344 ChimerSeq STARFusion TCGA_RNA-Seq HAPLN1-EDIL3 HAPLN1 chr5 83016608 - EDIL3 chr5 83239387 - Exonic hg19 SKCM TCGA-DA-A1I7-06A 5 10 5'UTR-CDS Intra-chr q14.3 q14.3 Seq+ 45345 ChimerSeq STARFusion TCGA_RNA-Seq SMYD3-ZMYM4 SMYD3 chr1 246490503 - ZMYM4 chr1 35835630 + Exonic hg19 SKCM TCGA-DA-A1I7-06A 2 16 In-Frame Intra-chr q44 Transcription factor p34.3 Seq+ 45346 ChimerSeq STARFusion TCGA_RNA-Seq CERK-KIAA1644 CERK chr22 47115983 - KIAA1644 chr22 44645565 - Exonic hg19 SKCM TCGA-DA-A1I7-06A 3 5 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 45347 ChimerSeq STARFusion TCGA_RNA-Seq MYO10-MARCH11 MYO10 chr5 16935897 - 2019_ 3_ 11_ chr5 16177990 - Exonic hg19 SKCM TCGA-DA-A1I7-06A 2 3 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 45348 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB2-IGKC DNAJB2 chr2 220151425 + IGKC chr2 89156807 - Exonic hg19 SKCM TCGA-D3-A8GN-06A 16 2 Out-of-frame Intra-chr q35 p11.2 45349 ChimerSeq STARFusion TCGA_RNA-Seq DCAKD-SMAP1 DCAKD chr17 43138256 - SMAP1 chr6 71464683 + Exonic hg19 SKCM TCGA-D3-A8GN-06A 5 31 5'UTR-CDS Inter-chr q21.31 q13 Seq+ 45350 ChimerSeq STARFusion TCGA_RNA-Seq DCAKD-SMAP1 DCAKD chr17 43128729 - SMAP1 chr6 71464683 + Exonic hg19 SKCM TCGA-D3-A8GN-06A 3 31 5'UTR-CDS Inter-chr q21.31 q13 Seq+ 45351 ChimerSeq STARFusion TCGA_RNA-Seq LNPEP-FLT4 LNPEP chr5 96271878 + FLT4 chr5 180048904 - Exonic hg19 SKCM TCGA-D3-A8GN-06A 8 10 In-Frame Intra-chr q15 q35.3 TK:VEGFR Oncogene Seq+ 45352 ChimerSeq STARFusion TCGA_RNA-Seq FBXW11-RBM11 FBXW11 chr5 171433462 - RBM11 chr21 15593418 + Exonic hg19 SKCM TCGA-D3-A8GN-06A 2 5 Out-of-frame Inter-chr q35.1 q11.2 Seq+ 45353 ChimerSeq STARFusion TCGA_RNA-Seq PRKCA-CACNG1 PRKCA chr17 64685165 + CACNG1 chr17 65050112 + Exonic hg19 SKCM TCGA-FS-A4FD-06A 4 17 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 45354 ChimerSeq STARFusion TCGA_RNA-Seq PRKCA-CACNG1 PRKCA chr17 64692605 + CACNG1 chr17 65050112 + Exonic hg19 SKCM TCGA-FS-A4FD-06A 2 17 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 45355 ChimerSeq STARFusion TCGA_RNA-Seq MMP17-NOC4L MMP17 chr12 132313198 + NOC4L chr12 132635526 + Exonic hg19 SKCM TCGA-D3-A51J-06A 2 1 Out-of-frame Intra-chr q24.33 q24.33 Seq+ 45356 ChimerSeq STARFusion TCGA_RNA-Seq HIRA-IGHGP HIRA chr22 19344505 - IGHGP chr14 106136183 - Exonic hg19 SKCM TCGA-FS-A1Z0-06A 19 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 45357 ChimerSeq STARFusion TCGA_RNA-Seq KCNQ5-RNF217 KCNQ5 chr6 73713721 + RNF217 chr6 125397803 + Exonic hg19 SKCM TCGA-FS-A1Z0-06A 5 22 In-Frame Intra-chr q13 q22.31 Seq+ 45358 ChimerSeq STARFusion TCGA_RNA-Seq HIRA-IGHGP HIRA chr22 19344505 - IGHGP chr14 106209409 - Exonic hg19 SKCM TCGA-FS-A1Z0-06A 9 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 45359 ChimerSeq STARFusion TCGA_RNA-Seq PNLDC1-KLHL32 PNLDC1 chr6 160225669 + KLHL32 chr6 97489368 + Exonic hg19 SKCM TCGA-FS-A1Z0-06A 4 7 Out-of-frame Intra-chr q25.3 q16.1 Seq+ 45360 ChimerSeq STARFusion TCGA_RNA-Seq RASSF3-ITGA7 RASSF3 chr12 65004523 + ITGA7 chr12 56079072 - Exonic hg19 SKCM TCGA-GN-A26D-06A 899 2995 In-Frame Intra-chr q14.2 Tumor suppressor gene q13.2 Tumor suppressor gene Seq+ 45361 ChimerSeq STARFusion TCGA_RNA-Seq GNS-FAM19A2 GNS chr12 65138589 - FAM19A2 chr12 62601031 - Exonic hg19 SKCM TCGA-GN-A26D-06A 160 890 CDS-5'UTR Intra-chr q14.3 q14.1 Seq+ 45362 ChimerSeq STARFusion TCGA_RNA-Seq CNOT2-RPS11P6 CNOT2 chr12 70672054 + RPS11P6 chr12 64782813 + Exonic hg19 SKCM TCGA-GN-A26D-06A 187 776 Out-of-frame Intra-chr q15 Seq+ 45363 ChimerSeq STARFusion TCGA_RNA-Seq GNS-RAB3IP GNS chr12 65138589 - RAB3IP chr12 70206744 + Exonic hg19 SKCM TCGA-GN-A26D-06A 109 923 In-Frame Intra-chr q14.3 q15 Seq+ 45364 ChimerSeq STARFusion TCGA_RNA-Seq NDUFC2-AAMDC NDUFC2 chr11 77790625 - AAMDC chr11 77629107 + Exonic hg19 SKCM TCGA-GN-A26D-06A 114 323 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 45365 ChimerSeq STARFusion TCGA_RNA-Seq BCAP31-HMGB3 BCAP31 chrX 152986327 - HMGB3 chrX 150154068 + Exonic hg19 SKCM TCGA-GN-A26D-06A 78 331 CDS-5'UTR Intra-chr q28 q28 Seq+ 45366 ChimerSeq STARFusion TCGA_RNA-Seq USP28-DRD2 USP28 chr11 113712385 - DRD2 chr11 113295404 - Exonic hg19 SKCM TCGA-GN-A26D-06A 24 150 CDS-5'UTR Intra-chr q23.2 q23.2 Seq+ 45367 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-HMGA2 TSFM chr12 58180074 + HMGA2 chr12 66345163 + Exonic hg19 SKCM TCGA-GN-A26D-06A 35 99 In-Frame Intra-chr q14.1 q14.3 Transcription factor Seq+ 45368 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC9-SLCO1A2 ZDHHC9 chrX 128977235 - SLCO1A2 chr12 21487643 - Exonic hg19 SKCM TCGA-GN-A26D-06A 13 164 5'UTR-5'UTR Inter-chr q26.1 p12.1 Seq+ 45369 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC9-SLCO1A2 ZDHHC9 chrX 128977235 - SLCO1A2 chr12 21487638 - Exonic hg19 SKCM TCGA-GN-A26D-06A 7 159 5'UTR-5'UTR Inter-chr q26.1 p12.1 Seq+ 45370 ChimerSeq STARFusion TCGA_RNA-Seq RASSF3-RPSAP52 RASSF3 chr12 65004523 + RPSAP52 chr12 66152811 - Exonic hg19 SKCM TCGA-GN-A26D-06A 28 74 CDS-3'UTR Intra-chr q14.2 Tumor suppressor gene q14.3 45371 ChimerSeq STARFusion TCGA_RNA-Seq LRIG3-ATP5B LRIG3 chr12 59270227 - ATP5B chr12 57039137 - Exonic hg19 SKCM TCGA-GN-A26D-06A 26 80 In-Frame Intra-chr q14.1 Tumor suppressor gene q13.3 Seq+ 45372 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC9-SLCO1A2 ZDHHC9 chrX 128977672 - SLCO1A2 chr12 21487638 - Exonic hg19 SKCM TCGA-GN-A26D-06A 5 159 5'UTR-5'UTR Inter-chr q26.1 p12.1 Seq+ 45373 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC9-SLCO1A2 ZDHHC9 chrX 128977672 - SLCO1A2 chr12 21487643 - Exonic hg19 SKCM TCGA-GN-A26D-06A 2 159 5'UTR-5'UTR Inter-chr q26.1 p12.1 Seq+ 45374 ChimerSeq STARFusion TCGA_RNA-Seq USP28-DRD2 USP28 chr11 113712385 - DRD2 chr11 113371471 - Exonic hg19 SKCM TCGA-GN-A26D-06A 3 150 CDS-5'UTR Intra-chr q23.2 q23.2 Seq+ 45375 ChimerSeq STARFusion TCGA_RNA-Seq YAP1-TTC12 YAP1 chr11 102098312 + TTC12 chr11 113238909 + Exonic hg19 SKCM TCGA-GN-A26D-06A 16 89 CDS-3'UTR Intra-chr q22.1 Tumor suppressor gene q23.2 Seq+ 45376 ChimerSeq STARFusion TCGA_RNA-Seq TBK1-GRIP1 TBK1 chr12 64849737 + GRIP1 chr12 66859202 - Exonic hg19 SKCM TCGA-GN-A26D-06A 22 58 Out-of-frame Intra-chr q14.2 Other:IKK q14.3 Seq+ 45377 ChimerSeq STARFusion TCGA_RNA-Seq GABRA3-SARNP GABRA3 chrX 151393235 - SARNP chr12 56146624 - Exonic hg19 SKCM TCGA-GN-A26D-06A 14 58 CDS-3'UTR Inter-chr q28 q13.2 Seq+ 45378 ChimerSeq STARFusion TCGA_RNA-Seq PAK1-PDGFD PAK1 chr11 77184597 - PDGFD chr11 103818452 - Exonic hg19 SKCM TCGA-GN-A26D-06A 19 37 5'UTR-CDS Intra-chr q14.1 STE:STE20 q22.3 Seq+ 45379 ChimerSeq STARFusion TCGA_RNA-Seq ENDOD1-RAB30 ENDOD1 chr11 94823391 + RAB30 chr11 82705164 - Exonic hg19 SKCM TCGA-GN-A26D-06A 16 33 In-Frame Intra-chr q21 q14.1 Seq+ 45380 ChimerSeq STARFusion TCGA_RNA-Seq MARK2-BATF2 MARK2 chr11 63607032 + BATF2 chr11 64762021 - Exonic hg19 SKCM TCGA-GN-A26D-06A 9 50 In-Frame Intra-chr q13.1 CAMK:CAMKL q13.1 Tumor suppressor gene Transcription factor Seq+ 45381 ChimerSeq STARFusion TCGA_RNA-Seq AP3B1-LHFPL2 AP3B1 chr5 77536686 - LHFPL2 chr5 77860694 - Exonic hg19 SKCM TCGA-GN-A26D-06A 3 64 CDS-5'UTR Intra-chr q14.1 q14.1 Seq+ 45382 ChimerSeq STARFusion TCGA_RNA-Seq FAM19A2-RAB3IP FAM19A2 chr12 62600953 - RAB3IP chr12 70206744 + Exonic hg19 SKCM TCGA-GN-A26D-06A 7 47 5'UTR-CDS Intra-chr q14.1 q15 Seq+ 45383 ChimerSeq STARFusion TCGA_RNA-Seq BNC2-C9orf92 BNC2 chr9 16552528 - C9orf92 chr9 16215897 - Exonic hg19 SKCM TCGA-GN-A26D-06A 7 46 Out-of-frame Intra-chr p22.2 Transcription factor p22.3 45384 ChimerSeq STARFusion TCGA_RNA-Seq BAZ2A-PCNPP3 BAZ2A chr12 57023909 - PCNPP3 chr12 66040322 - Exonic hg19 SKCM TCGA-GN-A26D-06A 5 52 Out-of-frame Intra-chr q13.3 Transcription factor q14.3 45385 ChimerSeq STARFusion TCGA_RNA-Seq TIMM23B-LINC00843 TIMM23B chr10 51387763 + LINC00843 chr10 51732772 + Exonic hg19 SKCM TCGA-GN-A26D-06A 6 46 Out-of-frame Intra-chr q11.23 q11.23 45386 ChimerSeq STARFusion TCGA_RNA-Seq CNOT2-SHMT2 CNOT2 chr12 70637260 + SHMT2 chr12 57624586 + Exonic hg19 SKCM TCGA-GN-A26D-06A 15 4 5'UTR-5'UTR Intra-chr q15 q13.3 45387 ChimerSeq STARFusion TCGA_RNA-Seq ENDOD1-RAB30 ENDOD1 chr11 94823391 + RAB30 chr11 82698812 - Exonic hg19 SKCM TCGA-GN-A26D-06A 8 32 In-Frame Intra-chr q21 q14.1 Seq+ 45388 ChimerSeq STARFusion TCGA_RNA-Seq LHFPL2-AP3B1 LHFPL2 chr5 77860636 - AP3B1 chr5 77563419 - Exonic hg19 SKCM TCGA-GN-A26D-06A 4 48 5'UTR-CDS Intra-chr q14.1 q14.1 45389 ChimerSeq STARFusion TCGA_RNA-Seq PAK1-ARHGAP42 PAK1 chr11 77184597 - ARHGAP42 chr11 100665836 + Exonic hg19 SKCM TCGA-GN-A26D-06A 8 30 5'UTR-CDS Intra-chr q14.1 STE:STE20 q22.1 Seq+ 45390 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM2-PPM1H R3HDM2 chr12 57789532 - PPM1H chr12 63131366 - Exonic hg19 SKCM TCGA-GN-A26D-06A 8 30 5'UTR-CDS Intra-chr q13.3 q14.2 Seq+ 45391 ChimerSeq STARFusion TCGA_RNA-Seq FAM19A2-RAB3IP FAM19A2 chr12 62600953 - RAB3IP chr12 70206558 + Exonic hg19 SKCM TCGA-GN-A26D-06A 2 47 5'UTR-CDS Intra-chr q14.1 q15 Seq+ 45392 ChimerSeq STARFusion TCGA_RNA-Seq HMGA2-GABRA3 HMGA2 chr12 66232349 + GABRA3 chrX 151393317 - Exonic hg19 SKCM TCGA-GN-A26D-06A 6 28 Out-of-frame Inter-chr q14.3 Transcription factor q28 Seq+ 45393 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R5E-GPHB5 PPP2R5E chr14 63920407 - GPHB5 chr14 63779830 - Exonic hg19 SKCM TCGA-GN-A26D-06A 7 24 In-Frame Intra-chr q23.2 q23.2 45394 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-TBC1D30 FRS2 chr12 69864310 + TBC1D30 chr12 65258448 + Exonic hg19 SKCM TCGA-GN-A26D-06A 3 39 5'UTR-CDS Intra-chr q15 q14.3 Seq+ 45395 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D15-MYF6 TBC1D15 chr12 72266783 + MYF6 chr12 81101634 + Exonic hg19 SKCM TCGA-GN-A26D-06A 5 22 Out-of-frame Intra-chr q21.1 q21.31 Transcription factor Seq+ 45396 ChimerSeq STARFusion TCGA_RNA-Seq RSF1-TRPC6 RSF1 chr11 77475643 - TRPC6 chr11 101375529 - Exonic hg19 SKCM TCGA-GN-A26D-06A 5 19 Out-of-frame Intra-chr q14.1 q22.1 Seq+ 45397 ChimerSeq STARFusion TCGA_RNA-Seq RASSF3-TSPAN31 RASSF3 chr12 65004523 + TSPAN31 chr12 58140372 + Exonic hg19 SKCM TCGA-GN-A26D-06A 3 25 In-Frame Intra-chr q14.2 Tumor suppressor gene q14.1 45398 ChimerSeq STARFusion TCGA_RNA-Seq MIR663A-MAP3K11 MIR663A chr20 26190002 - MAP3K11 chr11 65376546 - Exonic hg19 SKCM TCGA-GN-A26D-06A 6 11 Out-of-frame Inter-chr p11.1 q13.1 45399 ChimerSeq STARFusion TCGA_RNA-Seq SHMT2-SLC16A7 SHMT2 chr12 57627893 + SLC16A7 chr12 60165000 + Exonic hg19 SKCM TCGA-GN-A26D-06A 5 15 In-Frame Intra-chr q13.3 q14.1 Seq+ 45400 ChimerSeq STARFusion TCGA_RNA-Seq NARS2-PAK1 NARS2 chr11 78239888 - PAK1 chr11 77103586 - Exonic hg19 SKCM TCGA-GN-A26D-06A 4 17 CDS-5'UTR Intra-chr q14.1 q14.1 STE:STE20 Seq+ 45401 ChimerSeq STARFusion TCGA_RNA-Seq NARS2-PAK1 NARS2 chr11 78239888 - PAK1 chr11 77103583 - Exonic hg19 SKCM TCGA-GN-A26D-06A 3 16 CDS-5'UTR Intra-chr q14.1 q14.1 STE:STE20 Seq+ 45402 ChimerSeq STARFusion TCGA_RNA-Seq PLXNB3-WIBG PLXNB3 chrX 153031035 + WIBG chr12 56309339 - Exonic hg19 SKCM TCGA-GN-A26D-06A 4 11 5'UTR-CDS Inter-chr q28 12q13.2 45403 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-GRIP1 MDM2 chr12 69230529 + GRIP1 chr12 67197938 - Exonic hg19 SKCM TCGA-GN-A26D-06A 3 12 CDS-5'UTR Intra-chr q15 Oncogene q14.3 45404 ChimerSeq STARFusion TCGA_RNA-Seq SHMT2-SLC16A7 SHMT2 chr12 57627893 + SLC16A7 chr12 60154906 + Exonic hg19 SKCM TCGA-GN-A26D-06A 2 15 5'UTR-CDS Intra-chr q13.3 q14.1 Seq+ 45405 ChimerSeq STARFusion TCGA_RNA-Seq ANKH-ANO6 ANKH chr5 14741936 - ANO6 chr12 45695797 + Exonic hg19 SKCM TCGA-GN-A26D-06A 2 13 Out-of-frame Inter-chr p15.2 q12 Seq+ 45406 ChimerSeq STARFusion TCGA_RNA-Seq CAND1-PTPRR CAND1 chr12 67675833 + PTPRR chr12 71286757 - Exonic hg19 SKCM TCGA-GN-A26D-06A 2 10 Out-of-frame Intra-chr q14.3 q15 Seq+ 45407 ChimerSeq STARFusion TCGA_RNA-Seq INTS4-PGR INTS4 chr11 77666988 - PGR chr11 100962607 - Exonic hg19 SKCM TCGA-GN-A26D-06A 2 9 Out-of-frame Intra-chr q14.1 q22.1 Tumor suppressor gene Transcription factor Seq+ 45408 ChimerSeq STARFusion TCGA_RNA-Seq RASSF3-OS9 RASSF3 chr12 65004523 + OS9 chr12 58109543 + Exonic hg19 SKCM TCGA-GN-A26D-06A 2 8 In-Frame Intra-chr q14.2 Tumor suppressor gene q13.3 45409 ChimerSeq STARFusion TCGA_RNA-Seq CDKL3-SIL1 CDKL3 chr5 133706689 - SIL1 chr5 138463542 - Exonic hg19 SKCM TCGA-ER-A2NH-06A 12 4 5'UTR-5'UTR Intra-chr q31.1 CMGC:CDKL q31.2 Seq+ 45410 ChimerSeq STARFusion TCGA_RNA-Seq KLF7-PARD3B KLF7 chr2 207988498 - PARD3B chr2 205912304 + Exonic hg19 SKCM TCGA-ER-A2NH-06A 2 9 In-Frame Intra-chr q33.3 Transcription factor q33.3 Seq+ 45411 ChimerSeq STARFusion TCGA_RNA-Seq SHC1-IQGAP3 SHC1 chr1 154940680 - IQGAP3 chr1 156498874 - Exonic hg19 SKCM TCGA-EE-A3AD-06A 126 243 In-Frame Intra-chr q21.3 q22 Seq+ 45412 ChimerSeq STARFusion TCGA_RNA-Seq PTGIS-IFT52 PTGIS chr20 48156107 - IFT52 chr20 42232823 + Exonic hg19 SKCM TCGA-EE-A3AD-06A 13 44 In-Frame Intra-chr q13.13 q13.12 Seq+ 45413 ChimerSeq STARFusion TCGA_RNA-Seq SDCBP-UBB SDCBP chr8 59477625 + UBB chr17 16285216 + Exonic hg19 SKCM TCGA-EE-A3AD-06A 2 2 CDS-5'UTR Inter-chr q12.1 p11.2 45414 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF11-PLEKHA6 ARHGEF11 chr1 157014091 - PLEKHA6 chr1 204243937 - Exonic hg19 SKCM TCGA-EE-A182-06A 4 37 CDS-5'UTR Intra-chr q23.1 q32.1 Seq+ 45415 ChimerSeq STARFusion TCGA_RNA-Seq CAPN2-SH2D1B CAPN2 chr1 223954118 + SH2D1B chr1 162368877 - Exonic hg19 SKCM TCGA-EE-A182-06A 3 13 In-Frame Intra-chr q41 q23.3 Seq+ 45416 ChimerSeq STARFusion TCGA_RNA-Seq RAB5B-ALK RAB5B chr12 56367923 + ALK chr2 29449891 - Exonic hg19 SKCM TCGA-WE-A8K4-01A 127 42 5'UTR-CDS Inter-chr q13.2 p23.1 TK:ALK Oncogene Seq+ 45417 ChimerSeq STARFusion TCGA_RNA-Seq CASP8-CFLAR CASP8 chr2 202098835 + CFLAR chr2 201994452 + Exonic hg19 SKCM TCGA-WE-A8K4-01A 37 158 5'UTR-5'UTR Intra-chr q33.1 Oncogene Tumor suppressor gene q33.1 Seq+ 45418 ChimerSeq STARFusion TCGA_RNA-Seq FMN1-TMCO5B FMN1 chr15 33300215 - TMCO5B chr15 33538814 - Exonic hg19 SKCM TCGA-WE-A8K4-01A 23 52 CDS-3'UTR Intra-chr q13.3 45419 ChimerSeq STARFusion TCGA_RNA-Seq RAB5B-ALK RAB5B chr12 56367784 + ALK chr2 29449891 - Exonic hg19 SKCM TCGA-WE-A8K4-01A 14 36 5'UTR-CDS Inter-chr q13.2 p23.1 TK:ALK Oncogene Seq+ 45420 ChimerSeq STARFusion TCGA_RNA-Seq CDK2-ALK CDK2 chr12 56365031 + ALK chr2 29448431 - Exonic hg19 SKCM TCGA-WE-A8K4-01A 3 39 Out-of-frame Inter-chr q13.2 CMGC:CDK Tumor suppressor gene p23.1 TK:ALK Oncogene Seq+ 45421 ChimerSeq STARFusion TCGA_RNA-Seq CDC5L-MLIP CDC5L chr6 44397647 + MLIP chr6 54122106 + Exonic hg19 SKCM TCGA-WE-A8K4-01A 5 8 5'UTR-CDS Intra-chr p21.1 Transcription factor p12.1 Seq+ 45422 ChimerSeq STARFusion TCGA_RNA-Seq DOPEY2-CBR3 DOPEY2 chr21 37586854 + CBR3 chr21 37510123 + Exonic hg19 SKCM TCGA-WE-A8K4-01A 2 14 In-Frame Intra-chr q22.12 q22.12 Seq+ 45423 ChimerSeq STARFusion TCGA_RNA-Seq ZNF207-RFFL ZNF207 chr17 30687784 + RFFL chr17 33353580 - Exonic hg19 SKCM TCGA-WE-A8K4-01A 2 12 CDS-5'UTR Intra-chr q11.2 Transcription factor q12 45424 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM6-NDUFAF2 ZSWIM6 chr5 60628775 + NDUFAF2 chr5 60394819 + Exonic hg19 SKCM TCGA-FS-A4FC-06A 6 10 In-Frame Intra-chr q12.1 q12.1 Seq+ 45425 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM6-NDUFAF2 ZSWIM6 chr5 60628775 + NDUFAF2 chr5 60448531 + Exonic hg19 SKCM TCGA-FS-A4FC-06A 3 9 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 45426 ChimerSeq STARFusion TCGA_RNA-Seq EVC2-STK32B EVC2 chr4 5642249 - STK32B chr4 5141632 + Exonic hg19 SKCM TCGA-BF-A3DM-01A 5 16 Out-of-frame Intra-chr p16.2 p16.2 Seq+ 45427 ChimerSeq STARFusion TCGA_RNA-Seq DSCR4-KCNJ6 DSCR4 chr21 39492401 - KCNJ6 chr21 39213011 - Exonic hg19 SKCM TCGA-BF-A3DM-01A 2 3 CDS-5'UTR Intra-chr q22.13 q22.13 45428 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A36-CLSTN2 SLC25A36 chr3 140682069 + CLSTN2 chr3 139894793 + Exonic hg19 SKCM TCGA-EE-A3J7-06A 13 79 In-Frame Intra-chr q23 q23 Seq+ 45429 ChimerSeq STARFusion TCGA_RNA-Seq KMT2C-IRF5 KMT2C chr7 151980068 - IRF5 chr7 128582125 + Exonic hg19 SKCM TCGA-D3-A3C3-06A 4 12 Out-of-frame Intra-chr q36.1 Oncogene Tumor suppressor gene q32.1 Tumor suppressor gene Transcription factor Seq+ 45430 ChimerSeq STARFusion TCGA_RNA-Seq KMT2C-IRF5 KMT2C chr7 152007051 - IRF5 chr7 128582125 + Exonic hg19 SKCM TCGA-D3-A3C3-06A 3 12 Out-of-frame Intra-chr q36.1 Oncogene Tumor suppressor gene q32.1 Tumor suppressor gene Transcription factor Seq+ 45431 ChimerSeq STARFusion TCGA_RNA-Seq KMT2C-IRF5 KMT2C chr7 152007051 - IRF5 chr7 128585899 + Exonic hg19 SKCM TCGA-D3-A3C3-06A 2 12 Out-of-frame Intra-chr q36.1 Oncogene Tumor suppressor gene q32.1 Tumor suppressor gene Transcription factor Seq+ 45432 ChimerSeq STARFusion TCGA_RNA-Seq CYTH3-GRID1 CYTH3 chr7 6312105 - GRID1 chr10 87966405 - Exonic hg19 SKCM TCGA-EB-A42Z-01A 16 76 In-Frame Inter-chr p22.1 q23.2 Seq+ 45433 ChimerSeq STARFusion TCGA_RNA-Seq OSBP2-MRPL43 OSBP2 chr22 31137356 + MRPL43 chr10 102743574 - Exonic hg19 SKCM TCGA-EB-A42Z-01A 8 34 In-Frame Inter-chr q12.2 q24.31 Seq+ 45434 ChimerSeq STARFusion TCGA_RNA-Seq RTF1-GANC RTF1 chr15 41768017 + GANC chr15 42579889 + Exonic hg19 SKCM TCGA-EB-A42Z-01A 5 28 In-Frame Intra-chr q15.1 q15.1 Seq+ 45435 ChimerSeq STARFusion TCGA_RNA-Seq GNG7-PLA2G2A GNG7 chr19 2646222 - PLA2G2A chr1 20305372 - Exonic hg19 SKCM TCGA-EB-A42Z-01A 2 31 5'UTR-5'UTR Inter-chr p13.3 p36.13 Tumor suppressor gene Seq+ 45436 ChimerSeq STARFusion TCGA_RNA-Seq GRID1-HECTD2 GRID1 chr10 88123698 - HECTD2 chr10 93185038 + Exonic hg19 SKCM TCGA-EB-A42Z-01A 6 12 Out-of-frame Intra-chr q23.2 q23.32 Seq+ 45437 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1731-METTL4 KIAA1731 chr11 93408832 + METTL4 chr18 2544758 - Exonic hg19 SKCM TCGA-EB-A42Z-01A 3 22 In-Frame Inter-chr p11.32 45438 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-PHTF2 PTPN12 chr7 77221573 + PHTF2 chr7 77469538 + Exonic hg19 SKCM TCGA-EB-A42Z-01A 4 15 CDS-5'UTR Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 45439 ChimerSeq STARFusion TCGA_RNA-Seq HIVEP3-DOT1L HIVEP3 chr1 42094420 - DOT1L chr19 2180712 + Exonic hg19 SKCM TCGA-EB-A42Z-01A 2 16 5'UTR-CDS Inter-chr p34.2 Tumor suppressor gene Transcription factor p13.3 Oncogene Transcription factor Seq+ 45440 ChimerSeq STARFusion TCGA_RNA-Seq TANGO6-SNTB2 TANGO6 chr16 68877614 + SNTB2 chr16 69333493 + Exonic hg19 SKCM TCGA-EB-A42Z-01A 2 11 Out-of-frame Intra-chr q22.1 45441 ChimerSeq STARFusion TCGA_RNA-Seq DHX9-ZBTB37 DHX9 chr1 182829319 + ZBTB37 chr1 173839335 + Exonic hg19 SKCM TCGA-EB-A42Z-01A 3 4 5'UTR-5'UTR Intra-chr q25.3 q25.1 Transcription factor Seq+ 45442 ChimerSeq STARFusion TCGA_RNA-Seq DHX9-ZBTB37 DHX9 chr1 182829319 + ZBTB37 chr1 173839338 + Exonic hg19 SKCM TCGA-EB-A42Z-01A 2 4 5'UTR-5'UTR Intra-chr q25.3 q25.1 Transcription factor Seq+ 45443 ChimerSeq STARFusion TCGA_RNA-Seq MLLT4-TRAV34 MLLT4 chr6 168325771 + TRAV34 chr14 22675741 + Exonic hg19 SKCM TCGA-D3-A3C8-06A 6 11 Out-of-frame Inter-chr q11.2 45444 ChimerSeq STARFusion TCGA_RNA-Seq PLAT-C12orf66 PLAT chr8 42065012 - C12orf66 chr12 64609743 - Exonic hg19 SKCM TCGA-EB-A4IQ-01A 25 126 5'UTR-CDS Inter-chr p11.21 q14.2 Seq+ 45445 ChimerSeq STARFusion TCGA_RNA-Seq LARP4B-LINC00866 LARP4B chr10 875325 - LINC00866 chr10 99589478 - Exonic hg19 SKCM TCGA-EB-A4IQ-01A 2 14 Out-of-frame Intra-chr p15.3 q24.2 45446 ChimerSeq STARFusion TCGA_RNA-Seq MON2-SRGAP1 MON2 chr12 62861098 + SRGAP1 chr12 64410730 + Exonic hg19 SKCM TCGA-EB-A4IQ-01A 3 5 In-Frame Intra-chr q14.1 q14.2 45447 ChimerSeq STARFusion TCGA_RNA-Seq DPY19L3-GPR68 DPY19L3 chr19 32930816 + GPR68 chr14 91701523 - Exonic hg19 SKCM TCGA-EB-A4IQ-01A 2 6 CDS-5'UTR Inter-chr q13.11 q32.11 Seq+ 45448 ChimerSeq STARFusion TCGA_RNA-Seq SERF1A-ANKRD55 SERF1A chr5 70197760 + ANKRD55 chr5 55439756 - Exonic hg19 SKCM TCGA-EE-A29S-06A 3 17 Out-of-frame Intra-chr q13.2 q11.2 45449 ChimerSeq STARFusion TCGA_RNA-Seq TNRC18-DGKB TNRC18 chr7 5434071 - DGKB chr7 14217776 - Exonic hg19 SKCM TCGA-FR-A729-06A 16 47 In-Frame Intra-chr p22.1 p21.2 Seq+ 45450 ChimerSeq STARFusion TCGA_RNA-Seq CACNA1C-DERA CACNA1C chr12 2622150 + DERA chr12 16109870 + Exonic hg19 SKCM TCGA-EE-A2MR-06A 18 46 In-Frame Intra-chr p13.33 p12.3 Seq+ 45451 ChimerSeq STARFusion TCGA_RNA-Seq CACNA1C-DERA CACNA1C chr12 2595428 + DERA chr12 16109870 + Exonic hg19 SKCM TCGA-EE-A2MR-06A 2 46 In-Frame Intra-chr p13.33 p12.3 Seq+ 45452 ChimerSeq STARFusion TCGA_RNA-Seq CSK-C15orf27 CSK chr15 75075061 + C15orf27 chr15 76426509 + Exonic hg19 SKCM TCGA-EE-A2MR-06A 5 29 5'UTR-5'UTR Intra-chr q24.1 TK:Csk Seq+ 45453 ChimerSeq STARFusion TCGA_RNA-Seq ZNF609-LOC254559 ZNF609 chr15 64973061 + LOC254559 chr15 89931732 + Exonic hg19 SKCM TCGA-EE-A2MR-06A 4 16 CDS-5'UTR Intra-chr q22.31 Transcription factor 45454 ChimerSeq STARFusion TCGA_RNA-Seq GTPBP2-USP49 GTPBP2 chr6 43593493 - USP49 chr6 41766667 - Exonic hg19 SKCM TCGA-EE-A2MR-06A 2 5 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 45455 ChimerSeq STARFusion TCGA_RNA-Seq TTYH3-MAD1L1 TTYH3 chr7 2671912 + MAD1L1 chr7 1855864 - Exonic hg19 SKCM TCGA-BF-A3DL-01A 5 54 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 45456 ChimerSeq STARFusion TCGA_RNA-Seq TTYH3-MAD1L1 TTYH3 chr7 2671912 + MAD1L1 chr7 2020176 - Exonic hg19 SKCM TCGA-BF-A3DL-01A 2 49 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 45457 ChimerSeq STARFusion TCGA_RNA-Seq TTYH3-ASPSCR1 TTYH3 chr7 2671912 + ASPSCR1 chr17 79966913 + Exonic hg19 SKCM TCGA-BF-A3DL-01A 2 6 In-Frame Inter-chr p22.3 q25.3 Seq+ 45458 ChimerSeq STARFusion TCGA_RNA-Seq TTYH3-C7orf50 TTYH3 chr7 2671912 + C7orf50 chr7 1049779 - Exonic hg19 SKCM TCGA-BF-A3DL-01A 2 5 In-Frame Intra-chr p22.3 p22.3 Seq+ 45459 ChimerSeq STARFusion TCGA_RNA-Seq HMGN1-UBE2G2 HMGN1 chr21 40717072 - UBE2G2 chr21 46197332 - Exonic hg19 SKCM TCGA-RP-A693-06A 4 24 Out-of-frame Intra-chr q22.2 q22.3 Seq+ 45460 ChimerSeq STARFusion TCGA_RNA-Seq FBXO25-ST6GALNAC2 FBXO25 chr8 381355 + ST6GALNAC2 chr17 74560771 - Exonic hg19 SKCM TCGA-EB-A41A-01A 10 0 Out-of-frame Inter-chr p23.3 Tumor suppressor gene q25.1 45461 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK3-NBAS EIF2AK3 chr2 88926485 - NBAS chr2 15567918 - Exonic hg19 SKCM TCGA-DA-A95Y-06A 16 63 In-Frame Intra-chr p11.2 p24.3 Seq+ 45462 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK3-NBAS EIF2AK3 chr2 88926485 - NBAS chr2 15564592 - Exonic hg19 SKCM TCGA-DA-A95Y-06A 12 63 In-Frame Intra-chr p11.2 p24.3 Seq+ 45463 ChimerSeq STARFusion TCGA_RNA-Seq RNF144A-MSH2 RNF144A chr2 7081278 + MSH2 chr2 47635540 + Exonic hg19 SKCM TCGA-DA-A95Y-06A 8 21 5'UTR-CDS Intra-chr p25.1 Tumor suppressor gene p21 Oncogene Tumor suppressor gene Seq+ 45464 ChimerSeq STARFusion TCGA_RNA-Seq ARID2-C12orf56 ARID2 chr12 46125097 + C12orf56 chr12 64746836 - Exonic hg19 SKCM TCGA-DA-A95Y-06A 3 13 Out-of-frame Intra-chr q12 Oncogene Tumor suppressor gene Transcription factor q14.2 Seq+ 45465 ChimerSeq STARFusion TCGA_RNA-Seq RNASEH1-DYSF RNASEH1 chr2 3599734 - DYSF chr2 71871095 + Exonic hg19 SKCM TCGA-DA-A95Y-06A 2 12 Out-of-frame Intra-chr p25.3 p13.2 Seq+ 45466 ChimerSeq STARFusion TCGA_RNA-Seq MMP17-NOC4L MMP17 chr12 132313198 + NOC4L chr12 132635526 + Exonic hg19 SKCM TCGA-DA-A95Y-06A 2 2 Out-of-frame Intra-chr q24.33 q24.33 Seq+ 45467 ChimerSeq STARFusion TCGA_RNA-Seq NADSYN1-PPP6R3 NADSYN1 chr11 71189515 + PPP6R3 chr11 68321613 + Exonic hg19 SKCM TCGA-D9-A3Z3-06A 8 24 In-Frame Intra-chr q13.4 q13.2 Seq+ 45468 ChimerSeq STARFusion TCGA_RNA-Seq RNF121-MRPL21 RNF121 chr11 71671937 + MRPL21 chr11 68668073 - Exonic hg19 SKCM TCGA-D9-A3Z3-06A 5 20 Out-of-frame Intra-chr q13.4 q13.3 Seq+ 45469 ChimerSeq STARFusion TCGA_RNA-Seq TMEM120B-ORAI1 TMEM120B chr12 122150870 + ORAI1 chr12 122078947 + Exonic hg19 SKCM TCGA-FR-A44A-06A 8 37 In-Frame Intra-chr q24.31 q24.31 Seq+ 45470 ChimerSeq STARFusion TCGA_RNA-Seq FARS2-SYCP2L FARS2 chr6 5261893 + SYCP2L chr6 10930603 + Exonic hg19 SKCM TCGA-EE-A3JI-06A 6 60 5'UTR-CDS Intra-chr p25.1 p24.2 Seq+ 45471 ChimerSeq STARFusion TCGA_RNA-Seq CDYL-EEF1E1 CDYL chr6 4892613 + EEF1E1 chr6 8097700 - Exonic hg19 SKCM TCGA-EE-A3JI-06A 8 51 Out-of-frame Intra-chr p25.1 p24.3 Tumor suppressor gene Seq+ 45472 ChimerSeq STARFusion TCGA_RNA-Seq FARS2-SYCP2L FARS2 chr6 5261893 + SYCP2L chr6 10935291 + Exonic hg19 SKCM TCGA-EE-A3JI-06A 3 60 5'UTR-CDS Intra-chr p25.1 p24.2 Seq+ 45473 ChimerSeq STARFusion TCGA_RNA-Seq FARS2-SYCP2L FARS2 chr6 5272722 + SYCP2L chr6 10930603 + Exonic hg19 SKCM TCGA-EE-A3JI-06A 2 60 5'UTR-CDS Intra-chr p25.1 p24.2 Seq+ 45474 ChimerSeq STARFusion TCGA_RNA-Seq HIVEP1-TXNDC5 HIVEP1 chr6 12015901 + TXNDC5 chr6 7904956 - Exonic hg19 SKCM TCGA-EE-A3JI-06A 3 19 Out-of-frame Intra-chr p24.1 Tumor suppressor gene Transcription factor p24.3 45475 ChimerSeq STARFusion TCGA_RNA-Seq LYRM4-PHACTR1 LYRM4 chr6 5260881 - PHACTR1 chr6 13278500 + Exonic hg19 SKCM TCGA-EE-A3JI-06A 2 8 Out-of-frame Intra-chr p25.1 Seq+ 45476 ChimerSeq STARFusion TCGA_RNA-Seq CAP1-MACF1 CAP1 chr1 40506473 + MACF1 chr1 39934287 + Exonic hg19 SKCM TCGA-FS-A1ZC-06A 9 6 5'UTR-CDS Intra-chr p34.2 p34.3 Seq+ 45477 ChimerSeq STARFusion TCGA_RNA-Seq MKL2-PARN MKL2 chr16 14234617 + PARN chr16 14576684 - Exonic hg19 SKCM TCGA-FS-A1ZC-06A 2 1 In-Frame Intra-chr p13.12 Seq+ 45478 ChimerSeq STARFusion TCGA_RNA-Seq USP53-MYOZ2 USP53 chr4 120138828 + MYOZ2 chr4 120072027 + Exonic hg19 SKCM TCGA-FS-A1ZC-06A 2 1 5'UTR-CDS Intra-chr q26 q26 Seq+ 45479 ChimerSeq STARFusion TCGA_RNA-Seq ADCY2-CLPTM1L ADCY2 chr5 7789913 + CLPTM1L chr5 1320846 - Exonic hg19 SKCM TCGA-FS-A4F4-06A 27 190 In-Frame Intra-chr p15.31 p15.33 Seq+ 45480 ChimerSeq STARFusion TCGA_RNA-Seq TSPO-CDH18 TSPO chr22 43557196 + CDH18 chr5 19981287 - Exonic hg19 SKCM TCGA-FS-A4F4-06A 40 126 5'UTR-5'UTR Inter-chr q13.2 p14.3 Seq+ 45481 ChimerSeq STARFusion TCGA_RNA-Seq NAV2-ERC1 NAV2 chr11 19914140 + ERC1 chr12 1599259 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 42 76 Out-of-frame Inter-chr p15.1 Seq+ 45482 ChimerSeq STARFusion TCGA_RNA-Seq ARFGAP3-FBLN1 ARFGAP3 chr22 43253120 - FBLN1 chr22 45996187 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 17 120 Out-of-frame Intra-chr q13.2 q13.31 Tumor suppressor gene Seq+ 45483 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D22A-SREBF2 TBC1D22A chr22 47308084 + SREBF2 chr22 42262835 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 14 123 In-Frame Intra-chr q13.31 q13.2 Transcription factor Seq+ 45484 ChimerSeq STARFusion TCGA_RNA-Seq TSPO-CDH18 TSPO chr22 43557196 + CDH18 chr5 19981283 - Exonic hg19 SKCM TCGA-FS-A4F4-06A 8 126 5'UTR-5'UTR Inter-chr q13.2 p14.3 Seq+ 45485 ChimerSeq STARFusion TCGA_RNA-Seq TSPO-LZTR1 TSPO chr22 43547610 + LZTR1 chr22 21341793 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 14 57 5'UTR-CDS Intra-chr q13.2 q11.21 Seq+ 45486 ChimerSeq STARFusion TCGA_RNA-Seq EP300-FBLN1 EP300 chr22 41551117 + FBLN1 chr22 45996187 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 13 43 Out-of-frame Intra-chr q13.2 Oncogene q13.31 Tumor suppressor gene Seq+ 45487 ChimerSeq STARFusion TCGA_RNA-Seq TSPO-LZTR1 TSPO chr22 43547610 + LZTR1 chr22 21342299 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 8 57 5'UTR-CDS Intra-chr q13.2 q11.21 Seq+ 45488 ChimerSeq STARFusion TCGA_RNA-Seq ADRBK2-EP300 ADRBK2 chr22 25961120 + EP300 chr22 41550999 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 11 38 Out-of-frame Intra-chr q13.2 Oncogene Seq+ 45489 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7B-GRAMD4 ZC3H7B chr22 41697776 + GRAMD4 chr22 47063993 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 8 48 5'UTR-CDS Intra-chr q13.2 q13.31 Seq+ 45490 ChimerSeq STARFusion TCGA_RNA-Seq TRIO-SLC9A3 TRIO chr5 14394239 + SLC9A3 chr5 492186 - Exonic hg19 SKCM TCGA-FS-A4F4-06A 13 26 Out-of-frame Intra-chr p15.2 p15.33 Seq+ 45491 ChimerSeq STARFusion TCGA_RNA-Seq SULT4A1-TFIP11 SULT4A1 chr22 44258094 - TFIP11 chr22 26899759 - Exonic hg19 SKCM TCGA-FS-A4F4-06A 9 37 In-Frame Intra-chr q13.31 q12.1 Seq+ 45492 ChimerSeq STARFusion TCGA_RNA-Seq RAI14-CYB5R3 RAI14 chr5 34687060 + CYB5R3 chr22 43015951 - Exonic hg19 SKCM TCGA-FS-A4F4-06A 10 28 Out-of-frame Inter-chr p13.2 q13.2 Seq+ 45493 ChimerSeq STARFusion TCGA_RNA-Seq FAM109B-RAI14 FAM109B chr22 42471656 + RAI14 chr5 34686977 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 8 30 5'UTR-5'UTR Inter-chr q13.2 p13.2 Seq+ 45494 ChimerSeq STARFusion TCGA_RNA-Seq THAP7-A4GALT THAP7 chr22 21354936 - A4GALT chr22 43091637 - Exonic hg19 SKCM TCGA-FS-A4F4-06A 5 42 CDS-5'UTR Intra-chr q11.21 Transcription factor q13.2 Seq+ 45495 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890980 - BCAR4 chr16 11914154 - Exonic hg19 SKCM TCGA-FS-A4F4-06A 8 26 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 45496 ChimerSeq STARFusion TCGA_RNA-Seq PACSIN2-CERK PACSIN2 chr22 43342903 - CERK chr22 47083103 - Exonic hg19 SKCM TCGA-FS-A4F4-06A 6 29 5'UTR-CDS Intra-chr q13.2 q13.31 Seq+ 45497 ChimerSeq STARFusion TCGA_RNA-Seq POLDIP3-MED15 POLDIP3 chr22 42998776 - MED15 chr22 20905723 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 3 38 In-Frame Intra-chr q13.2 q11.21 Seq+ 45498 ChimerSeq STARFusion TCGA_RNA-Seq POLDIP3-MED15 POLDIP3 chr22 42997976 - MED15 chr22 20905723 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 3 38 In-Frame Intra-chr q13.2 q11.21 Seq+ 45499 ChimerSeq STARFusion TCGA_RNA-Seq SULT4A1-TFIP11 SULT4A1 chr22 44258094 - TFIP11 chr22 26898018 - Exonic hg19 SKCM TCGA-FS-A4F4-06A 2 37 Out-of-frame Intra-chr q13.31 q12.1 Seq+ 45500 ChimerSeq STARFusion TCGA_RNA-Seq PLA2G6-TMEM184B PLA2G6 chr22 38577791 - TMEM184B chr22 38627340 - Exonic hg19 SKCM TCGA-FS-A4F4-06A 10 4 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 45501 ChimerSeq STARFusion TCGA_RNA-Seq RANGAP1-CERK RANGAP1 chr22 41664101 - CERK chr22 47083103 - Exonic hg19 SKCM TCGA-FS-A4F4-06A 5 18 Out-of-frame Intra-chr q13.2 q13.31 Seq+ 45502 ChimerSeq STARFusion TCGA_RNA-Seq CYB5R3-RBX1 CYB5R3 chr22 43015843 - RBX1 chr22 41360051 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 4 20 In-Frame Intra-chr q13.2 q13.2 Seq+ 45503 ChimerSeq STARFusion TCGA_RNA-Seq NF2-EFCAB6 NF2 chr22 30051665 + EFCAB6 chr22 44083461 - Exonic hg19 SKCM TCGA-FS-A4F4-06A 2 13 In-Frame Intra-chr q12.2 Oncogene Tumor suppressor gene q13.31 Seq+ 45504 ChimerSeq STARFusion TCGA_RNA-Seq XYLT1-HS3ST4 XYLT1 chr16 17292069 - HS3ST4 chr16 26146933 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 2 9 In-Frame Intra-chr p12.3 p12.1 Seq+ 45505 ChimerSeq STARFusion TCGA_RNA-Seq EFCAB6-CYB5R3 EFCAB6 chr22 44112728 - CYB5R3 chr22 43032852 - Exonic hg19 SKCM TCGA-FS-A4F4-06A 3 3 In-Frame Intra-chr q13.31 q13.2 Seq+ 45506 ChimerSeq STARFusion TCGA_RNA-Seq PARVB-PPARA PARVB chr22 44420331 + PPARA chr22 46547791 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 2 5 CDS-5'UTR Intra-chr q13.31 q13.31 Tumor suppressor gene Transcription factor Seq+ 45507 ChimerSeq STARFusion TCGA_RNA-Seq RANGAP1-ARHGAP8 RANGAP1 chr22 41670604 - ARHGAP8 chr22 45182337 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 2 5 CDS-5'UTR Intra-chr q13.2 q13.31 Seq+ 45508 ChimerSeq STARFusion TCGA_RNA-Seq ADCY2-SAMM50 ADCY2 chr5 7414883 + SAMM50 chr22 44359166 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 2 3 In-Frame Inter-chr p15.31 q13.31 Seq+ 45509 ChimerSeq STARFusion TCGA_RNA-Seq SOX5-LINC00477 SOX5 chr12 24366277 - LINC00477 chr12 24724591 - Exonic hg19 SKCM TCGA-FS-A4F4-06A 2 1 5'UTR-3'UTR Intra-chr p12.1 Transcription factor p12.1 45510 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7B-TRIO ZC3H7B chr22 41716717 + TRIO chr5 14336645 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 2 1 Out-of-frame Inter-chr q13.2 p15.2 45511 ChimerSeq STARFusion TCGA_RNA-Seq COL1A1-TLN1 COL1A1 chr17 48264098 - TLN1 chr9 35706285 - Exonic hg19 SKCM TCGA-D3-A3C6-06A 3 2 Out-of-frame Inter-chr q21.33 Oncogene p13.3 45512 ChimerSeq STARFusion TCGA_RNA-Seq SPIRE1-PSMG2 SPIRE1 chr18 12635061 - PSMG2 chr18 12706549 + Exonic hg19 SKCM TCGA-EE-A2GB-06A 17 20 In-Frame Intra-chr p11.21 p11.21 Seq+ 45513 ChimerSeq STARFusion TCGA_RNA-Seq GAREM-PTPRM GAREM chr18 29972858 - PTPRM chr18 7888104 + Exonic hg19 SKCM TCGA-EE-A2GB-06A 8 35 Out-of-frame Intra-chr p11.23 45514 ChimerSeq STARFusion TCGA_RNA-Seq METTL21B-PIP4K2C METTL21B chr12 58166911 + PIP4K2C chr12 57987808 + Exonic hg19 SKCM TCGA-EE-A2GB-06A 8 32 Out-of-frame Intra-chr q13.3 Seq+ 45515 ChimerSeq STARFusion TCGA_RNA-Seq LOC728558-LIPM LOC728558 chr10 97849023 - LIPM chr10 90577582 + Exonic hg19 SKCM TCGA-EE-A2GB-06A 9 16 3'UTR-CDS Intra-chr q23.31 45516 ChimerSeq STARFusion TCGA_RNA-Seq METTL21B-PIP4K2C METTL21B chr12 58166856 + PIP4K2C chr12 57987808 + Exonic hg19 SKCM TCGA-EE-A2GB-06A 3 32 Out-of-frame Intra-chr q13.3 Seq+ 45517 ChimerSeq STARFusion TCGA_RNA-Seq MOCOS-ELP2 MOCOS chr18 33767644 + ELP2 chr18 33724902 + Exonic hg19 SKCM TCGA-EE-A2GB-06A 6 13 In-Frame Intra-chr q12.2 q12.2 45518 ChimerSeq STARFusion TCGA_RNA-Seq NPLOC4-PDE6G NPLOC4 chr17 79589192 - PDE6G chr17 79618715 - Exonic hg19 SKCM TCGA-EE-A2GB-06A 5 2 In-Frame Intra-chr q25.3 q25.3 Seq+ 45519 ChimerSeq STARFusion TCGA_RNA-Seq MOCOS-ELP2 MOCOS chr18 33767644 + ELP2 chr18 33722789 + Exonic hg19 SKCM TCGA-EE-A2GB-06A 2 13 In-Frame Intra-chr q12.2 q12.2 45520 ChimerSeq STARFusion TCGA_RNA-Seq C17orf70-NPLOC4 C17orf70 chr17 79511030 - NPLOC4 chr17 79526442 - Exonic hg19 SKCM TCGA-W3-A828-06A 10 60 Out-of-frame Intra-chr q25.3 Seq+ 45521 ChimerSeq STARFusion TCGA_RNA-Seq GOLIM4-MECOM GOLIM4 chr3 167742314 - MECOM chr3 168861620 - Exonic hg19 SKCM TCGA-W3-A828-06A 6 46 In-Frame Intra-chr q26.2 q26.2 Transcription factor Seq+ 45522 ChimerSeq STARFusion TCGA_RNA-Seq CAT-TRIM44 CAT chr11 34482936 + TRIM44 chr11 35827908 + Exonic hg19 SKCM TCGA-W3-A828-06A 6 33 Out-of-frame Intra-chr p13 Tumor suppressor gene p13 Seq+ 45523 ChimerSeq STARFusion TCGA_RNA-Seq CAT-TRIM44 CAT chr11 34478364 + TRIM44 chr11 35827908 + Exonic hg19 SKCM TCGA-W3-A828-06A 4 33 Out-of-frame Intra-chr p13 Tumor suppressor gene p13 Seq+ 45524 ChimerSeq STARFusion TCGA_RNA-Seq TCF20-CENPM TCF20 chr22 42605657 - CENPM chr22 42342500 - Exonic hg19 SKCM TCGA-W3-A828-06A 5 17 In-Frame Intra-chr Transcription factor q13.2 Seq+ 45525 ChimerSeq STARFusion TCGA_RNA-Seq RBM3-COL1A1 RBM3 chrX 48434090 + COL1A1 chr17 48264909 - Exonic hg19 SKCM TCGA-W3-A828-06A 4 2 Out-of-frame Inter-chr p11.23 q21.33 Oncogene 45526 ChimerSeq STARFusion TCGA_RNA-Seq RNF130-HRH2 RNF130 chr5 179467453 - HRH2 chr5 175109712 + Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 24 51 CDS-5'UTR Intra-chr q35.3 q35.2 Seq+ 45527 ChimerSeq STARFusion TCGA_RNA-Seq UBL3-SUCLA2 UBL3 chr13 30423649 - SUCLA2 chr13 48571158 - Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 18 60 In-Frame Intra-chr q12.3 q14.2 Seq+ 45528 ChimerSeq STARFusion TCGA_RNA-Seq CHCHD6-UBA5 CHCHD6 chr3 126449473 + UBA5 chr3 132384667 + Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 17 40 In-Frame Intra-chr q21.3 q22.1 Seq+ 45529 ChimerSeq STARFusion TCGA_RNA-Seq HOXA3-PARP8 HOXA3 chr7 27179702 - PARP8 chr5 50055477 + Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 11 50 5'UTR-CDS Inter-chr p15.2 Transcription factor q11.1 Seq+ 45530 ChimerSeq STARFusion TCGA_RNA-Seq DTL-PPP2R5A DTL chr1 212218100 + PPP2R5A chr1 212502477 + Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 10 29 In-Frame Intra-chr q32.3 q32.3 Seq+ 45531 ChimerSeq STARFusion TCGA_RNA-Seq HRH2-OR2V1 HRH2 chr5 175085158 + OR2V1 chr5 180557215 - Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 12 18 5'UTR-5'UTR Intra-chr q35.2 q35.3 45532 ChimerSeq STARFusion TCGA_RNA-Seq PDE8A-BNC1 PDE8A chr15 85643429 + BNC1 chr15 83926878 - Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 8 32 Out-of-frame Intra-chr q25.3 q25.2 Transcription factor Seq+ 45533 ChimerSeq STARFusion TCGA_RNA-Seq UBL3-SUCLA2 UBL3 chr13 30423649 - SUCLA2 chr13 48563116 - Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 6 35 Out-of-frame Intra-chr q12.3 q14.2 Seq+ 45534 ChimerSeq STARFusion TCGA_RNA-Seq UBL3-SUCLA2 UBL3 chr13 30423649 - SUCLA2 chr13 48547527 - Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 3 35 In-Frame Intra-chr q12.3 q14.2 Seq+ 45535 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D1-LIMCH1 TBC1D1 chr4 37892969 + LIMCH1 chr4 41652410 + Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 3 22 5'UTR-CDS Intra-chr p14 p13 Seq+ 45536 ChimerSeq STARFusion TCGA_RNA-Seq NPHP3-LSAMP NPHP3 chr3 132400758 - LSAMP chr3 115738487 - Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 2 23 Out-of-frame Intra-chr q22.1 q13.31 Tumor suppressor gene Seq+ 45537 ChimerSeq STARFusion TCGA_RNA-Seq HRH2-OR2V1 HRH2 chr5 175085158 + OR2V1 chr5 180552325 - Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 3 18 5'UTR-5'UTR Intra-chr q35.2 q35.3 45538 ChimerSeq STARFusion TCGA_RNA-Seq LSAMP-COL4A5 LSAMP chr3 115738362 - COL4A5 chrX 107811989 + Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 4 14 In-Frame Inter-chr q13.31 Tumor suppressor gene q22.3 Seq+ 45539 ChimerSeq STARFusion TCGA_RNA-Seq CRLF3-CRHR1 CRLF3 chr17 29151541 - CRHR1 chr17 43893829 + Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 4 10 Out-of-frame Intra-chr q11.2 q21.31 Seq+ 45540 ChimerSeq STARFusion TCGA_RNA-Seq C3orf72-PROS1 C3orf72 chr3 138666306 + PROS1 chr3 93646251 - Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 2 15 In-Frame Intra-chr q11.1 Seq+ 45541 ChimerSeq STARFusion TCGA_RNA-Seq PIK3R4-KALRN PIK3R4 chr3 130463330 - KALRN chr3 124113982 + Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 4 6 Out-of-frame Intra-chr q22.1 Other:VPS15 q21.1 Seq+ 45542 ChimerSeq STARFusion TCGA_RNA-Seq ATAD5-PSMA1 ATAD5 chr17 29182345 + PSMA1 chr11 14540587 - Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 4 5 Out-of-frame Inter-chr q11.2 p15.2 Seq+ 45543 ChimerSeq STARFusion TCGA_RNA-Seq ATAD5-PSMA1 ATAD5 chr17 29182345 + PSMA1 chr11 14540587 - Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 4 5 Out-of-frame Inter-chr q11.2 p15.2 Seq+ 45544 ChimerSeq STARFusion TCGA_RNA-Seq CCDC102B-AHCTF1 CCDC102B chr18 66678341 + AHCTF1 chr1 247007230 - Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 2 8 Out-of-frame Inter-chr q22.1 q44 Transcription factor Seq+ 45545 ChimerSeq STARFusion TCGA_RNA-Seq PARP8-GGCT PARP8 chr5 49963959 + GGCT chr7 30540297 - Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 2 7 Out-of-frame Inter-chr q11.1 p14.3 45546 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-PIP5K1P1 KCTD20 chr6 36457999 + PIP5K1P1 chr6 7987766 + Exonic hg19 SKCM TCGA-EB-A6R0-01A 32 0 Out-of-frame Intra-chr p21.31 p24.3 45547 ChimerSeq STARFusion TCGA_RNA-Seq BAGE2-CTBP2P1 BAGE2 chr21 11058161 - CTBP2P1 chrY 59001440 + Exonic hg19 SKCM TCGA-EB-A6R0-01A 4 10 Out-of-frame Inter-chr p11.2 45548 ChimerSeq STARFusion TCGA_RNA-Seq LMNA-NTRK1 LMNA chr1 156100564 + NTRK1 chr1 156844698 + Exonic hg19 SKCM TCGA-D3-A8GE-06A 245 1016 In-Frame Intra-chr q22 q23.1 Oncogene KB Pub Seq+ 45549 ChimerSeq STARFusion TCGA_RNA-Seq AGMO-MEOX2 AGMO chr7 15584397 - MEOX2 chr7 15666543 - Exonic hg19 SKCM TCGA-D3-A8GE-06A 2 2 In-Frame Intra-chr p21.2 p21.2 Transcription factor Seq+ 45550 ChimerSeq STARFusion TCGA_RNA-Seq RSBN1L-HGF RSBN1L chr7 77326372 + HGF chr7 81374436 - Exonic hg19 SKCM TCGA-EB-A5SE-01A 5 35 In-Frame Intra-chr q11.23 q21.11 Oncogene Seq+ 45551 ChimerSeq STARFusion TCGA_RNA-Seq OBSCN-DISC1 OBSCN chr1 228433389 + DISC1 chr1 231829572 + Exonic hg19 SKCM TCGA-EB-A5SE-01A 4 22 In-Frame Intra-chr q42.13 q42.2 Seq+ 45552 ChimerSeq STARFusion TCGA_RNA-Seq OBSCN-DISC1 OBSCN chr1 228434504 + DISC1 chr1 231829572 + Exonic hg19 SKCM TCGA-EB-A5SE-01A 3 22 In-Frame Intra-chr q42.13 q42.2 Seq+ 45553 ChimerSeq STARFusion TCGA_RNA-Seq PBRM1-NEK4 PBRM1 chr3 52643329 - NEK4 chr3 52773650 - Exonic hg19 SKCM TCGA-EB-A5SE-01A 3 14 In-Frame Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 Other:NEK Seq+ 45554 ChimerSeq STARFusion TCGA_RNA-Seq PBRM1-NEK4 PBRM1 chr3 52637537 - NEK4 chr3 52773650 - Exonic hg19 SKCM TCGA-EB-A5SE-01A 3 14 Out-of-frame Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 Other:NEK Seq+ 45555 ChimerSeq STARFusion TCGA_RNA-Seq RP2-CHST7 RP2 chrX 46696637 + CHST7 chrX 46457195 + Exonic hg19 SKCM TCGA-EE-A2GL-06A 7 21 CDS-3'UTR Intra-chr p11.3 p11.3 Seq+ 45556 ChimerSeq STARFusion TCGA_RNA-Seq HIVEP3-C1orf168 HIVEP3 chr1 42501478 - C1orf168 chr1 57233611 - Exonic hg19 SKCM TCGA-EE-A2GL-06A 2 11 3'UTR-CDS Intra-chr p34.2 Tumor suppressor gene Transcription factor p32.2 Seq+ 45557 ChimerSeq STARFusion TCGA_RNA-Seq ZNF738-CHMP1A ZNF738 chr19 21558766 + CHMP1A chr16 89713739 - Exonic hg19 SKCM TCGA-EE-A2MP-06A 2 0 5'UTR-CDS Inter-chr p12 q24.3 Seq+ 45558 ChimerSeq STARFusion TCGA_RNA-Seq RXRG-FAM78B RXRG chr1 165386278 - FAM78B chr1 166040000 - Exonic hg19 SKCM TCGA-EE-A2ML-06A 4 14 Out-of-frame Intra-chr q23.3 Transcription factor q24.1 Seq+ 45559 ChimerSeq STARFusion TCGA_RNA-Seq LOC100131234-CDC42BPA LOC100131234 chr1 198906355 - CDC42BPA chr1 227279692 - Exonic hg19 SKCM TCGA-EE-A2ML-06A 4 7 3'UTR-CDS Intra-chr q42.13 45560 ChimerSeq STARFusion TCGA_RNA-Seq RABGAP1L-DARS2 RABGAP1L chr1 174274265 + DARS2 chr1 173795825 + Exonic hg19 SKCM TCGA-EE-A2ML-06A 3 7 In-Frame Intra-chr q25.1 q25.1 Seq+ 45561 ChimerSeq STARFusion TCGA_RNA-Seq APC-NREP APC chr5 112043579 + NREP chr5 111071204 - Exonic hg19 SKCM TCGA-ER-A195-06A 11 53 In-Frame Intra-chr q22.2 Oncogene Tumor suppressor gene q22.1 Seq+ 45562 ChimerSeq STARFusion TCGA_RNA-Seq APC-NREP APC chr5 112043346 + NREP chr5 111071204 - Exonic hg19 SKCM TCGA-ER-A195-06A 4 53 5'UTR-CDS Intra-chr q22.2 Oncogene Tumor suppressor gene q22.1 Seq+ 45563 ChimerSeq STARFusion TCGA_RNA-Seq DCPS-TIRAP DCPS chr11 126176639 + TIRAP chr11 126160357 + Exonic hg19 SKCM TCGA-ER-A195-06A 2 7 CDS-5'UTR Intra-chr q24.2 q24.2 Seq+ 45564 ChimerSeq STARFusion TCGA_RNA-Seq DCPS-TIRAP DCPS chr11 126176639 + TIRAP chr11 126160698 + Exonic hg19 SKCM TCGA-ER-A195-06A 2 7 CDS-5'UTR Intra-chr q24.2 q24.2 Seq+ 45565 ChimerSeq STARFusion TCGA_RNA-Seq FMN1-AVEN FMN1 chr15 33091005 - AVEN chr15 34168196 - Exonic hg19 SKCM TCGA-D3-A5GL-06A 17 65 Out-of-frame Intra-chr q14 Seq+ 45566 ChimerSeq STARFusion TCGA_RNA-Seq FMN1-AVEN FMN1 chr15 33149216 - AVEN chr15 34168196 - Exonic hg19 SKCM TCGA-D3-A5GL-06A 2 65 In-Frame Intra-chr q14 Seq+ 45567 ChimerSeq STARFusion TCGA_RNA-Seq ANKS1B-ERP29 ANKS1B chr12 99166820 - ERP29 chr12 112457560 + Exonic hg19 SKCM TCGA-D3-A5GL-06A 3 22 In-Frame Intra-chr q23.1 q24.13 Seq+ 45568 ChimerSeq STARFusion TCGA_RNA-Seq UBE2E3-TECPR2 UBE2E3 chr2 181848820 + TECPR2 chr14 102963316 + Exonic hg19 SKCM TCGA-D9-A4Z5-01A 30 108 Out-of-frame Inter-chr q31.3 q32.31 Seq+ 45569 ChimerSeq STARFusion TCGA_RNA-Seq FAM19A5-SYNE3 FAM19A5 chr22 49042558 + SYNE3 chr14 95906412 - Exonic hg19 SKCM TCGA-D9-A4Z5-01A 6 8 Out-of-frame Inter-chr q13.32 q32.13 Seq+ 45570 ChimerSeq STARFusion TCGA_RNA-Seq IL17D-IFT88 IL17D chr13 21278430 + IFT88 chr13 21199889 + Exonic hg19 SKCM TCGA-D9-A4Z5-01A 4 14 In-Frame Intra-chr q12.11 q12.11 Tumor suppressor gene Seq+ 45571 ChimerSeq STARFusion TCGA_RNA-Seq IL17D-IFT88 IL17D chr13 21278430 + IFT88 chr13 21189932 + Exonic hg19 SKCM TCGA-D9-A4Z5-01A 3 14 In-Frame Intra-chr q12.11 q12.11 Tumor suppressor gene Seq+ 45572 ChimerSeq STARFusion TCGA_RNA-Seq IL17D-IFT88 IL17D chr13 21277459 + IFT88 chr13 21189932 + Exonic hg19 SKCM TCGA-D9-A4Z5-01A 2 14 5'UTR-CDS Intra-chr q12.11 q12.11 Tumor suppressor gene Seq+ 45573 ChimerSeq STARFusion TCGA_RNA-Seq DICER1-LINC00871 DICER1 chr14 95623567 - LINC00871 chr14 46940565 + Exonic hg19 SKCM TCGA-D9-A4Z5-01A 3 6 Out-of-frame Intra-chr q32.13 Oncogene Tumor suppressor gene q21.2 45574 ChimerSeq STARFusion TCGA_RNA-Seq NAB1-STEAP3 NAB1 chr2 191514086 + STEAP3 chr2 120020633 + Exonic hg19 SKCM TCGA-D9-A4Z5-01A 2 7 5'UTR-CDS Intra-chr q32.2 q14.2 Seq+ 45575 ChimerSeq STARFusion TCGA_RNA-Seq DICER1-LINC00871 DICER1 chr14 95623567 - LINC00871 chr14 46919111 + Exonic hg19 SKCM TCGA-D9-A4Z5-01A 2 6 Out-of-frame Intra-chr q32.13 Oncogene Tumor suppressor gene q21.2 45576 ChimerSeq STARFusion TCGA_RNA-Seq DICER1-LINC00871 DICER1 chr14 95623567 - LINC00871 chr14 46959395 + Exonic hg19 SKCM TCGA-D9-A4Z5-01A 2 6 Out-of-frame Intra-chr q32.13 Oncogene Tumor suppressor gene q21.2 45577 ChimerSeq STARFusion TCGA_RNA-Seq UBE2H-ZC3HC1 UBE2H chr7 129592343 - ZC3HC1 chr7 129680925 - Exonic hg19 SKCM TCGA-DA-A1HV-06A 25 34 Out-of-frame Intra-chr q32.2 q32.2 Seq+ 45578 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-MYO1F IGH@ chr14 106725198 - MYO1F chr19 8606762 - Exonic hg19 SKCM TCGA-DA-A1HV-06A 7 1 Out-of-frame Inter-chr 32.33 p13.2 45579 ChimerSeq STARFusion TCGA_RNA-Seq C6orf62-MRS2 C6orf62 chr6 24714546 - MRS2 chr6 24423812 + Exonic hg19 SKCM TCGA-EE-A2GP-06A 24 78 In-Frame Intra-chr p22.3 p22.3 Seq+ 45580 ChimerSeq STARFusion TCGA_RNA-Seq MRS2-C6orf62 MRS2 chr6 24423278 + C6orf62 chr6 24709139 - Exonic hg19 SKCM TCGA-EE-A2GP-06A 20 79 In-Frame Intra-chr p22.3 p22.3 Seq+ 45581 ChimerSeq STARFusion TCGA_RNA-Seq ATP1A1-ATG4C ATP1A1 chr1 116916145 + ATG4C chr1 63329663 + Exonic hg19 SKCM TCGA-EE-A2GP-06A 12 33 In-Frame Intra-chr p13.1 p31.3 Seq+ 45582 ChimerSeq STARFusion TCGA_RNA-Seq MTRR-FASTKD3 MTRR chr5 7897360 + FASTKD3 chr5 7866096 - Exonic hg19 SKCM TCGA-EB-A44R-06A 35 108 Out-of-frame Intra-chr p15.31 Oncogene p15.31 Seq+ 45583 ChimerSeq STARFusion TCGA_RNA-Seq SUB1-ELMO1 SUB1 chr5 32585731 + ELMO1 chr7 37172839 - Exonic hg19 SKCM TCGA-EB-A44R-06A 42 77 5'UTR-CDS Inter-chr p13.3 p14.1 Seq+ 45584 ChimerSeq STARFusion TCGA_RNA-Seq HEATR2-BRAT1 HEATR2 chr7 769484 + BRAT1 chr7 2587112 - Exonic hg19 SKCM TCGA-EB-A44R-06A 14 62 Out-of-frame Intra-chr p22.3 Seq+ 45585 ChimerSeq STARFusion TCGA_RNA-Seq CT49-CTNND2 CT49 chr5 12595890 + CTNND2 chr5 11412181 - Exonic hg19 SKCM TCGA-EB-A44R-06A 10 70 Out-of-frame Intra-chr p15.2 45586 ChimerSeq STARFusion TCGA_RNA-Seq NEK3-GXYLT2 NEK3 chr13 52722550 - GXYLT2 chr3 73006380 + Exonic hg19 SKCM TCGA-EB-A44R-06A 11 46 In-Frame Inter-chr q14.3 Other:NEK p13 Seq+ 45587 ChimerSeq STARFusion TCGA_RNA-Seq FOXK1-THSD7A FOXK1 chr7 4780654 + THSD7A chr7 11422243 - Exonic hg19 SKCM TCGA-EB-A44R-06A 4 37 Out-of-frame Intra-chr p22.1 Transcription factor p21.3 Seq+ 45588 ChimerSeq STARFusion TCGA_RNA-Seq BRAT1-GUSBP1 BRAT1 chr7 2593939 - GUSBP1 chr5 21459787 + Exonic hg19 SKCM TCGA-EB-A44R-06A 4 16 CDS-5'UTR Inter-chr p22.3 p14.3 Seq+ 45589 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2NL-PHTF1 NOTCH2NL chr1 145281704 + PHTF1 chr1 114241009 - Exonic hg19 SKCM TCGA-EB-A44R-06A 2 18 Out-of-frame Intra-chr q21.1 p13.2 45590 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2NL-PHTF1 NOTCH2NL chr1 145281704 + PHTF1 chr1 114242421 - Exonic hg19 SKCM TCGA-EB-A44R-06A 2 18 Out-of-frame Intra-chr q21.1 p13.2 45591 ChimerSeq STARFusion TCGA_RNA-Seq PILRB-PVRIG PILRB chr7 99943591 + PVRIG chr7 99816872 + Exonic hg19 SKCM TCGA-EB-A44R-06A 4 6 5'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 45592 ChimerSeq STARFusion TCGA_RNA-Seq MICALL2-HDAC9 MICALL2 chr7 1484288 - HDAC9 chr7 18684294 + Exonic hg19 SKCM TCGA-EB-A44R-06A 3 9 Out-of-frame Intra-chr p22.3 p21.1 Seq+ 45593 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2-PHTF1 NOTCH2 chr1 120539620 - PHTF1 chr1 114241009 - Exonic hg19 SKCM TCGA-EB-A44R-06A 4 0 Out-of-frame Intra-chr p12 Oncogene Tumor suppressor gene p13.2 45594 ChimerSeq STARFusion TCGA_RNA-Seq GLCCI1-DGKB GLCCI1 chr7 8009438 + DGKB chr7 14881075 - Exonic hg19 SKCM TCGA-EB-A44R-06A 2 7 CDS-5'UTR Intra-chr p21.3 p21.2 Seq+ 45595 ChimerSeq STARFusion TCGA_RNA-Seq ROR1-SEPT7 ROR1 chr1 64240179 + SEPT7 chr7 35872408 + Exonic hg19 SKCM TCGA-EB-A44R-06A 2 2 Out-of-frame Inter-chr p31.3 TK:Ror p14.2 45596 ChimerSeq STARFusion TCGA_RNA-Seq TIMM23B-LINC00843 TIMM23B chr10 51387763 + LINC00843 chr10 51732772 + Exonic hg19 SKCM TCGA-EE-A29M-06A 6 29 Out-of-frame Intra-chr q11.23 q11.23 45597 ChimerSeq STARFusion TCGA_RNA-Seq RBX1-ZNF442 RBX1 chr22 41363888 + ZNF442 chr19 12463928 - Exonic hg19 SKCM TCGA-EE-A29M-06A 2 7 Out-of-frame Inter-chr q13.2 p13.2 Transcription factor Seq+ 45598 ChimerSeq STARFusion TCGA_RNA-Seq TRIM33-ASB17 TRIM33 chr1 114973420 - ASB17 chr1 76384843 - Exonic hg19 SKCM TCGA-EB-A3XE-01A 2 12 In-Frame Intra-chr p13.2 Oncogene p31.1 Seq+ 45599 ChimerSeq STARFusion TCGA_RNA-Seq EYA3-SPCS2P4 EYA3 chr1 28374894 - SPCS2P4 chr1 28438057 - Exonic hg19 SKCM TCGA-GN-A267-06A 4 15 Out-of-frame Intra-chr p35.3 p35.3 Seq+ 45600 ChimerSeq STARFusion TCGA_RNA-Seq ZFP106-CNTLN ZFP106 chr15 42749156 - CNTLN chr9 17415786 + Exonic hg19 SKCM TCGA-BF-AAP2-01A 6 4 Out-of-frame Inter-chr p22.2 45601 ChimerSeq STARFusion TCGA_RNA-Seq DIP2C-LARP4B DIP2C chr10 735434 - LARP4B chr10 910210 - Exonic hg19 SKCM TCGA-BF-AAP2-01A 4 8 Out-of-frame Intra-chr p15.3 p15.3 Seq+ 45602 ChimerSeq STARFusion TCGA_RNA-Seq TRAK1-RAF1 TRAK1 chr3 42235390 + RAF1 chr3 12641914 - Exonic hg19 SKCM TCGA-EE-A2MI-06A 22 102 In-Frame Intra-chr p22.1 p25.2 TKL:RAF Oncogene Seq+ 45603 ChimerSeq STARFusion TCGA_RNA-Seq RAF1-TRAK1 RAF1 chr3 12645635 - TRAK1 chr3 42236296 + Exonic hg19 SKCM TCGA-EE-A2MI-06A 21 76 In-Frame Intra-chr p25.2 TKL:RAF Oncogene p22.1 Seq+ 45604 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-C10orf54 SSH2 chr17 28256956 - C10orf54 chr10 73521783 - Exonic hg19 SKCM TCGA-EE-A2MI-06A 8 18 Out-of-frame Inter-chr q11.2 Seq+ 45605 ChimerSeq STARFusion TCGA_RNA-Seq CELSR1-TTC40 CELSR1 chr22 46929524 - TTC40 chr10 134628418 - Exonic hg19 SKCM TCGA-EE-A29V-06A 39 151 In-Frame Inter-chr q13.31 45606 ChimerSeq STARFusion TCGA_RNA-Seq CELSR1-TTC40 CELSR1 chr22 46929524 - TTC40 chr10 134623993 - Exonic hg19 SKCM TCGA-EE-A29V-06A 12 150 Out-of-frame Inter-chr q13.31 45607 ChimerSeq STARFusion TCGA_RNA-Seq LRRFIP2-DEPTOR LRRFIP2 chr3 37216030 - DEPTOR chr8 121061815 + Exonic hg19 SKCM TCGA-EE-A29V-06A 19 85 5'UTR-CDS Inter-chr p22.2 q24.12 Seq+ 45608 ChimerSeq STARFusion TCGA_RNA-Seq MRPL52-C14orf93 MRPL52 chr14 23299463 + C14orf93 chr14 23468365 - Exonic hg19 SKCM TCGA-EE-A29V-06A 11 28 5'UTR-5'UTR Intra-chr q11.2 q11.2 Seq+ 45609 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN9-KLRG1 TSPAN9 chr12 3192885 + KLRG1 chr12 9161571 + Exonic hg19 SKCM TCGA-EE-A29V-06A 6 48 5'UTR-CDS Intra-chr p13.33 p13.31 Seq+ 45610 ChimerSeq STARFusion TCGA_RNA-Seq RPTOR-RAB34 RPTOR chr17 78519591 + RAB34 chr17 27042919 - Exonic hg19 SKCM TCGA-EE-A29V-06A 4 25 Out-of-frame Intra-chr q25.3 q11.2 Seq+ 45611 ChimerSeq STARFusion TCGA_RNA-Seq RPTOR-RAB34 RPTOR chr17 78519591 + RAB34 chr17 27043076 - Exonic hg19 SKCM TCGA-EE-A29V-06A 4 25 Out-of-frame Intra-chr q25.3 q11.2 Seq+ 45612 ChimerSeq STARFusion TCGA_RNA-Seq PMEL-PKD1 PMEL chr12 56351193 - PKD1 chr16 2160935 - Exonic hg19 SKCM TCGA-EE-A29V-06A 9 1 Out-of-frame Inter-chr q13.2 p13.3 CAMK:PKD Tumor suppressor gene 45613 ChimerSeq STARFusion TCGA_RNA-Seq CTSS-TDRD10 CTSS chr1 150720253 - TDRD10 chr1 154519885 + Exonic hg19 SKCM TCGA-EB-A6QY-01A 18 91 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 45614 ChimerSeq STARFusion TCGA_RNA-Seq KCNQ5-ALK KCNQ5 chr6 73332315 + ALK chr2 29498362 - Exonic hg19 SKCM TCGA-EB-A6QY-01A 3 9 In-Frame Inter-chr q13 p23.1 TK:ALK Oncogene Seq+ 45615 ChimerSeq STARFusion TCGA_RNA-Seq C9orf114-LOC100507412 C9orf114 chr9 131591014 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 SKCM TCGA-EB-A6QY-01A 2 6 CDS-5'UTR Inter-chr 45616 ChimerSeq STARFusion TCGA_RNA-Seq NME2-AR NME2 chr17 49249080 + AR chrX 66764976 + Exonic hg19 SKCM TCGA-EB-A6QY-01A 3 0 Out-of-frame Inter-chr q21.33 Transcription factor q12 Oncogene Tumor suppressor gene Transcription factor 45617 ChimerSeq STARFusion TCGA_RNA-Seq ATP5L-AHCYL2 ATP5L chr11 118272432 + AHCYL2 chr7 129019482 + Exonic hg19 SKCM TCGA-EE-A2MF-06A 62 241 Out-of-frame Inter-chr q23.3 q32.1 Seq+ 45618 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-PMEL EGFR chr7 55242532 + PMEL chr12 56359738 - Exonic hg19 SKCM TCGA-D3-A1QA-06A 3 3 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q13.2 45619 ChimerSeq STARFusion TCGA_RNA-Seq HDLBP-IGKC HDLBP chr2 242189560 - IGKC chr2 89161435 - Exonic hg19 SKCM TCGA-FS-A1ZT-06A 41 1 Out-of-frame Intra-chr q37.3 p11.2 45620 ChimerSeq STARFusion TCGA_RNA-Seq SLC35B2-IGHG3 SLC35B2 chr6 44225180 - IGHG3 chr14 106330839 - Exonic hg19 SKCM TCGA-FS-A1ZT-06A 16 1 Out-of-frame Inter-chr p21.1 45621 ChimerSeq STARFusion TCGA_RNA-Seq HIST1H2AC-TNFRSF21 HIST1H2AC chr6 26124977 + TNFRSF21 chr6 47254331 - Exonic hg19 SKCM TCGA-FS-A1ZT-06A 4 44 3'UTR-CDS Intra-chr p22.2 p12.3 Seq+ 45622 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525072 - IGHG1 chr14 106209410 - Exonic hg19 SKCM TCGA-FS-A1ZT-06A 13 0 Out-of-frame Inter-chr q34 Oncogene q32.33 45623 ChimerSeq STARFusion TCGA_RNA-Seq NRBP1-IGHG1 NRBP1 chr2 27664674 + IGHG1 chr14 106209410 - Exonic hg19 SKCM TCGA-FS-A1ZT-06A 9 2 Out-of-frame Inter-chr p23.3 Other:NRBP Tumor suppressor gene q32.33 45624 ChimerSeq STARFusion TCGA_RNA-Seq RBM14-ACTN3 RBM14 chr11 66384528 + ACTN3 chr11 66318710 + Exonic hg19 SKCM TCGA-FS-A1ZT-06A 2 27 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 45625 ChimerSeq STARFusion TCGA_RNA-Seq RSF1-ARRB1 RSF1 chr11 77383087 - ARRB1 chr11 75001083 - Exonic hg19 SKCM TCGA-FS-A1ZT-06A 5 15 Out-of-frame Intra-chr q14.1 q13.4 Seq+ 45626 ChimerSeq STARFusion TCGA_RNA-Seq RBM4-ACTN3 RBM4 chr11 66384528 + ACTN3 chr11 66318710 + Exonic hg19 SKCM TCGA-FS-A1ZT-06A 2 26 5'UTR-5'UTR Intra-chr q13.2 Tumor suppressor gene q13.2 Seq+ 45627 ChimerSeq STARFusion TCGA_RNA-Seq TAF4-ENPP7P8 TAF4 chr20 60639507 - ENPP7P8 chr11 71442468 + Exonic hg19 SKCM TCGA-FS-A1ZT-06A 3 8 Out-of-frame Inter-chr q13.4 Seq+ 45628 ChimerSeq STARFusion TCGA_RNA-Seq HPS4-UBE2L3 HPS4 chr22 26859883 - UBE2L3 chr22 21947150 + Exonic hg19 SKCM TCGA-XV-A9W2-01A 42 132 In-Frame Intra-chr q12.1 q11.21 Seq+ 45629 ChimerSeq STARFusion TCGA_RNA-Seq ST13-MEI1 ST13 chr22 41252435 - MEI1 chr22 42154369 + Exonic hg19 SKCM TCGA-XV-A9W2-01A 4 9 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 Seq+ 45630 ChimerSeq STARFusion TCGA_RNA-Seq DGCR2-GNB1L DGCR2 chr22 19052361 - GNB1L chr22 19776483 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 50 155 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 45631 ChimerSeq STARFusion TCGA_RNA-Seq COMMD9-C11orf91 COMMD9 chr11 36300027 - C11orf91 chr11 33720060 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 50 149 Out-of-frame Intra-chr p13 p13 Seq+ 45632 ChimerSeq STARFusion TCGA_RNA-Seq COMMD9-CD59 COMMD9 chr11 36300027 - CD59 chr11 33720060 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 50 149 CDS-3'UTR Intra-chr p13 p13 Seq+ 45633 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L3-CEP89 SIPA1L3 chr19 38682950 + CEP89 chr19 33372919 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 34 77 In-Frame Intra-chr q13.13 q13.11 Seq+ 45634 ChimerSeq STARFusion TCGA_RNA-Seq SLC3A2-GRAP2 SLC3A2 chr11 62653080 + GRAP2 chr22 40365415 + Exonic hg19 SKCM TCGA-FS-A1ZK-06A 18 117 In-Frame Inter-chr q12.3 q13.1 Seq+ 45635 ChimerSeq STARFusion TCGA_RNA-Seq GRAP2-BRD1 GRAP2 chr22 40365537 + BRD1 chr22 50192767 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 22 67 In-Frame Intra-chr q13.1 q13.33 Seq+ 45636 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-LINC00511 SLC39A11 chr17 70943869 - LINC00511 chr17 70427364 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 4 136 Out-of-frame Intra-chr q25.1 q24.3 45637 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-LINC00511 SLC39A11 chr17 70943891 - LINC00511 chr17 70427365 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 4 133 CDS-3'UTR Intra-chr q25.1 q24.3 45638 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-LINC00511 SLC39A11 chr17 70943891 - LINC00511 chr17 70424439 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 3 133 CDS-3'UTR Intra-chr q25.1 q24.3 45639 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-LINC00511 SLC39A11 chr17 70943667 - LINC00511 chr17 70427365 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 2 133 Out-of-frame Intra-chr q25.1 q24.3 45640 ChimerSeq STARFusion TCGA_RNA-Seq RNF157-CA10 RNF157 chr17 74236234 - CA10 chr17 49711011 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 19 56 Out-of-frame Intra-chr q25.1 q22 Seq+ 45641 ChimerSeq STARFusion TCGA_RNA-Seq BRD1-SLC3A2 BRD1 chr22 50219378 - SLC3A2 chr11 62652649 + Exonic hg19 SKCM TCGA-FS-A1ZK-06A 10 81 5'UTR-5'UTR Inter-chr q13.33 q12.3 Seq+ 45642 ChimerSeq STARFusion TCGA_RNA-Seq SMARCD2-NUFIP2 SMARCD2 chr17 61912065 - NUFIP2 chr17 27594548 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 18 45 Out-of-frame Intra-chr q23.3 q11.2 Seq+ 45643 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L3-CEP89 SIPA1L3 chr19 38673380 + CEP89 chr19 33372919 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 8 77 Out-of-frame Intra-chr q13.13 q13.11 Seq+ 45644 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-CRLF3 FAM222B chr17 27139227 - CRLF3 chr17 29131126 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 8 75 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 45645 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-CRLF3 FAM222B chr17 27169700 - CRLF3 chr17 29131126 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 8 72 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 45646 ChimerSeq STARFusion TCGA_RNA-Seq SBF1-TENM4 SBF1 chr22 50905767 - TENM4 chr11 78468066 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 12 43 Out-of-frame Inter-chr q13.33 q14.1 Seq+ 45647 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-CRLF3 FAM222B chr17 27117396 - CRLF3 chr17 29131126 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 4 72 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 45648 ChimerSeq STARFusion TCGA_RNA-Seq CLIC1-MSH5 CLIC1 chr6 31699994 - MSH5 chr6 31710654 + Exonic hg19 SKCM TCGA-FS-A1ZK-06A 8 31 Out-of-frame Intra-chr 45649 ChimerSeq STARFusion TCGA_RNA-Seq MBTD1-PART1 MBTD1 chr17 49336504 - PART1 chr5 59825231 + Exonic hg19 SKCM TCGA-FS-A1ZK-06A 7 30 5'UTR-5'UTR Inter-chr q21.33 q12.1 Seq+ 45650 ChimerSeq STARFusion TCGA_RNA-Seq APPBP2-CA10 APPBP2 chr17 58577760 - CA10 chr17 49711011 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 6 18 Out-of-frame Intra-chr q23.2 q22 Seq+ 45651 ChimerSeq STARFusion TCGA_RNA-Seq CHIC2-SIPA1L3 CHIC2 chr4 54915122 - SIPA1L3 chr19 38519729 + Exonic hg19 SKCM TCGA-FS-A1ZK-06A 6 14 CDS-5'UTR Inter-chr q12 q13.13 Seq+ 45652 ChimerSeq STARFusion TCGA_RNA-Seq MBTD1-PART1 MBTD1 chr17 49336504 - PART1 chr5 59841929 + Exonic hg19 SKCM TCGA-FS-A1ZK-06A 2 30 5'UTR-5'UTR Inter-chr q21.33 q12.1 Seq+ 45653 ChimerSeq STARFusion TCGA_RNA-Seq SUN1-ABHD16A SUN1 chr7 856310 + ABHD16A chr6 31659695 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 9 0 5'UTR-CDS Inter-chr p22.3 Seq+ 45654 ChimerSeq STARFusion TCGA_RNA-Seq ZBED4-RANGAP1 ZBED4 chr22 50247637 + RANGAP1 chr22 41670731 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 6 4 5'UTR-CDS Intra-chr q13.33 Transcription factor q13.2 Seq+ 45655 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-CPNE7 ANKRD11 chr16 89556653 - CPNE7 chr16 89657415 + Exonic hg19 SKCM TCGA-FS-A1ZK-06A 3 8 5'UTR-CDS Intra-chr q24.3 q24.3 Tumor suppressor gene Seq+ 45656 ChimerSeq STARFusion TCGA_RNA-Seq CAPN5-OR7E1P CAPN5 chr11 76827349 + OR7E1P chr11 67742489 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 3 6 Out-of-frame Intra-chr q13.5 q13.2 Seq+ 45657 ChimerSeq STARFusion TCGA_RNA-Seq RBFOX2-MKL1 RBFOX2 chr22 36142520 - MKL1 chr22 40859290 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 2 8 CDS-5'UTR Intra-chr q13.2 Seq+ 45658 ChimerSeq STARFusion TCGA_RNA-Seq SYN3-C6orf48 SYN3 chr22 32992660 - C6orf48 chr6 31803188 + Exonic hg19 SKCM TCGA-FS-A1ZK-06A 2 8 CDS-5'UTR Inter-chr q12.3 Seq+ 45659 ChimerSeq STARFusion TCGA_RNA-Seq MYO10-SLC12A7 MYO10 chr5 16794755 - SLC12A7 chr5 1094363 - Exonic hg19 SKCM TCGA-FS-A1ZG-06A 26 95 Out-of-frame Intra-chr p15.1 p15.33 Seq+ 45660 ChimerSeq STARFusion TCGA_RNA-Seq DAP-SEMA5A DAP chr5 10748287 - SEMA5A chr5 9380135 - Exonic hg19 SKCM TCGA-FS-A1ZG-06A 10 40 CDS-5'UTR Intra-chr p15.2 p15.31 Seq+ 45661 ChimerSeq STARFusion TCGA_RNA-Seq FAM134B-ANKH FAM134B chr5 16565872 - ANKH chr5 14769300 - Exonic hg19 SKCM TCGA-FS-A1ZG-06A 5 12 Out-of-frame Intra-chr p15.2 Seq+ 45662 ChimerSeq STARFusion TCGA_RNA-Seq BAGE2-FAM230C BAGE2 chr21 11021110 - FAM230C chrUn_gl000212 47751 + Exonic hg19 SKCM TCGA-FS-A1Z3-06A 2 1 Out-of-frame Inter-chr p11.2 45663 ChimerSeq STARFusion TCGA_RNA-Seq BAGE3-FAM230C BAGE3 chr21 11021110 - FAM230C chrUn_gl000212 47751 + Exonic hg19 SKCM TCGA-FS-A1Z3-06A 2 1 Out-of-frame Inter-chr 45664 ChimerSeq STARFusion TCGA_RNA-Seq BAGE4-FAM230C BAGE4 chr21 11021110 - FAM230C chrUn_gl000212 47751 + Exonic hg19 SKCM TCGA-FS-A1Z3-06A 2 1 Out-of-frame Inter-chr 45665 ChimerSeq STARFusion TCGA_RNA-Seq BAGE5-FAM230C BAGE5 chr21 11021110 - FAM230C chrUn_gl000212 47751 + Exonic hg19 SKCM TCGA-FS-A1Z3-06A 2 1 Out-of-frame Inter-chr 45666 ChimerSeq STARFusion TCGA_RNA-Seq DDX17-CPT1B DDX17 chr22 38894090 - CPT1B chr22 51010551 - Exonic hg19 SKCM TCGA-EE-A2MU-06A 7 22 In-Frame Intra-chr q13.1 q13.33 Seq+ 45667 ChimerSeq STARFusion TCGA_RNA-Seq PMEL-CAPNS1 PMEL chr12 56348059 - CAPNS1 chr19 36640820 + Exonic hg19 SKCM TCGA-EE-A2MU-06A 3 1 Out-of-frame Inter-chr q13.2 q13.12 45668 ChimerSeq STARFusion TCGA_RNA-Seq RQCD1-IGL@ RQCD1 chr2 219459370 + IGL@ chr22 23241801 + Exonic hg19 SKCM TCGA-D9-A1JW-06A 23 1 Out-of-frame Inter-chr q11.22 45669 ChimerSeq STARFusion TCGA_RNA-Seq RQCD1-IGLC3 RQCD1 chr2 219459370 + IGLC3 chr22 23241801 + Exonic hg19 SKCM TCGA-D9-A1JW-06A 23 1 Out-of-frame Inter-chr q11.22 45670 ChimerSeq STARFusion TCGA_RNA-Seq GRB2-VMP1 GRB2 chr17 73389632 - VMP1 chr17 57842332 + Exonic hg19 SKCM TCGA-D9-A1JW-06A 9 54 In-Frame Intra-chr q25.1 q23.1 Seq+ 45671 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R15B-IGL@ PPP1R15B chr1 204373253 - IGL@ chr22 23247170 + Exonic hg19 SKCM TCGA-D9-A1JW-06A 22 1 Out-of-frame Inter-chr q32.1 q11.22 45672 ChimerSeq STARFusion TCGA_RNA-Seq RQCD1-IGL@ RQCD1 chr2 219459370 + IGL@ chr22 23247171 + Exonic hg19 SKCM TCGA-D9-A1JW-06A 17 1 Out-of-frame Inter-chr q11.22 45673 ChimerSeq STARFusion TCGA_RNA-Seq RQCD1-IGLC3 RQCD1 chr2 219459370 + IGLC3 chr22 23247171 + Exonic hg19 SKCM TCGA-D9-A1JW-06A 17 1 Out-of-frame Inter-chr q11.22 45674 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R15B-IGL@ PPP1R15B chr1 204373252 - IGL@ chr22 23241801 + Exonic hg19 SKCM TCGA-D9-A1JW-06A 10 2 Out-of-frame Inter-chr q32.1 q11.22 45675 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R15B-IGLC2 PPP1R15B chr1 204373252 - IGLC2 chr22 23241801 + Exonic hg19 SKCM TCGA-D9-A1JW-06A 10 1 Out-of-frame Inter-chr q32.1 q11.22 45676 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CDH1 IGH@ chr14 106725199 - CDH1 chr16 68863610 + Exonic hg19 SKCM TCGA-D9-A1JW-06A 8 3 Out-of-frame Inter-chr 32.33 q22.1 Oncogene Tumor suppressor gene 45677 ChimerSeq STARFusion TCGA_RNA-Seq CD55-NEK2 CD55 chr1 207512762 + NEK2 chr1 211836970 - Exonic hg19 SKCM TCGA-D9-A1JW-06A 3 5 In-Frame Intra-chr q32.2 q32.3 Other:NEK Seq+ 45678 ChimerSeq STARFusion TCGA_RNA-Seq ARID1A-DGKA ARID1A chr1 27106722 + DGKA chr12 56346689 + Exonic hg19 SKCM TCGA-EE-A17Z-06A 101 355 Out-of-frame Inter-chr p36.11 Oncogene Tumor suppressor gene q13.2 Seq+ 45679 ChimerSeq STARFusion TCGA_RNA-Seq RASA2-RBP1 RASA2 chr3 141206058 + RBP1 chr3 139258674 - Exonic hg19 SKCM TCGA-EE-A17Z-06A 6 50 CDS-5'UTR Intra-chr q23 q23 Tumor suppressor gene 45680 ChimerSeq STARFusion TCGA_RNA-Seq YAP1-MAML2 YAP1 chr11 102076805 + MAML2 chr11 95826681 - Exonic hg19 SKCM TCGA-EE-A17Z-06A 3 18 In-Frame Intra-chr q22.1 Tumor suppressor gene q21 Oncogene KB Pub Seq+ 45681 ChimerSeq STARFusion TCGA_RNA-Seq ASB1-SH3BP4 ASB1 chr2 239344650 + SH3BP4 chr2 235943511 + Exonic hg19 SKCM TCGA-EE-A17Z-06A 4 12 Out-of-frame Intra-chr q37.3 q37.2 Seq+ 45682 ChimerSeq STARFusion TCGA_RNA-Seq MED15-BCL2L13 MED15 chr22 20922918 + BCL2L13 chr22 18120868 + Exonic hg19 SKCM TCGA-EE-A17Z-06A 2 16 CDS-5'UTR Intra-chr q11.21 q11.21 Seq+ 45683 ChimerSeq STARFusion TCGA_RNA-Seq HIP1-SLC30A5 HIP1 chr7 75210553 - SLC30A5 chr5 68425274 + Exonic hg19 SKCM TCGA-EE-A17Z-06A 4 7 Out-of-frame Inter-chr q11.23 q13.1 Seq+ 45684 ChimerSeq STARFusion TCGA_RNA-Seq ASB1-SH3BP4 ASB1 chr2 239342336 + SH3BP4 chr2 235943515 + Exonic hg19 SKCM TCGA-EE-A17Z-06A 2 12 CDS-5'UTR Intra-chr q37.3 q37.2 Seq+ 45685 ChimerSeq STARFusion TCGA_RNA-Seq MAML2-YAP1 MAML2 chr11 96074547 - YAP1 chr11 102094353 + Exonic hg19 SKCM TCGA-EE-A17Z-06A 2 6 In-Frame Intra-chr q21 Oncogene q22.1 Tumor suppressor gene Seq+ 45686 ChimerSeq STARFusion TCGA_RNA-Seq API5-GANC API5 chr11 43343686 + GANC chr15 42598744 + Exonic hg19 SKCM TCGA-FS-A4FB-06A 25 96 In-Frame Inter-chr p12 q15.1 Seq+ 45687 ChimerSeq STARFusion TCGA_RNA-Seq USP15-C9orf53 USP15 chr12 62786982 + C9orf53 chr9 21967138 + Exonic hg19 SKCM TCGA-FS-A4FB-06A 5 16 CDS-5'UTR Inter-chr q14.1 45688 ChimerSeq STARFusion TCGA_RNA-Seq HERC2-GANC HERC2 chr15 28566508 - GANC chr15 42579889 + Exonic hg19 SKCM TCGA-FS-A4FB-06A 3 19 In-Frame Intra-chr q15.1 45689 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-C16orf59 CREBBP chr16 3788560 - C16orf59 chr16 2514040 + Exonic hg19 SKCM TCGA-ER-A42K-06A 2 8 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 45690 ChimerSeq STARFusion TCGA_RNA-Seq LOC100132891-PHACTR3 LOC100132891 chr8 72756657 + PHACTR3 chr20 58381096 + Exonic hg19 SKCM TCGA-EE-A2MH-06A 10 34 5'UTR-CDS Inter-chr q13.32 45691 ChimerSeq STARFusion TCGA_RNA-Seq VAPB-PKIA VAPB chr20 56964573 + PKIA chr8 79485046 + Exonic hg19 SKCM TCGA-EE-A2MH-06A 6 31 5'UTR-5'UTR Inter-chr q13.32 q21.13 Seq+ 45692 ChimerSeq STARFusion TCGA_RNA-Seq VAPB-PKIA VAPB chr20 56964573 + PKIA chr8 79510593 + Exonic hg19 SKCM TCGA-EE-A2MH-06A 2 31 5'UTR-5'UTR Inter-chr q13.32 q21.13 Seq+ 45693 ChimerSeq STARFusion TCGA_RNA-Seq WWP1-ZNF704 WWP1 chr8 87414432 + ZNF704 chr8 81733850 - Exonic hg19 SKCM TCGA-EE-A2MH-06A 6 8 CDS-5'UTR Intra-chr q21.3 q21.13 Transcription factor Seq+ 45694 ChimerSeq STARFusion TCGA_RNA-Seq NFATC2-PHACTR3 NFATC2 chr20 50048604 - PHACTR3 chr20 58420244 + Exonic hg19 SKCM TCGA-EE-A2MH-06A 3 11 Out-of-frame Intra-chr q13.2 Tumor suppressor gene Transcription factor q13.32 Seq+ 45695 ChimerSeq STARFusion TCGA_RNA-Seq STAU2-OSBPL2 STAU2 chr8 74507401 - OSBPL2 chr20 60831113 + Exonic hg19 SKCM TCGA-EE-A2MH-06A 3 6 CDS-5'UTR Inter-chr q21.11 q13.33 Seq+ 45696 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD1-SLCO5A1 PCMTD1 chr8 52758221 - SLCO5A1 chr8 70674110 - Exonic hg19 SKCM TCGA-EE-A2MH-06A 2 7 Out-of-frame Intra-chr q11.23 q13.3 Seq+ 45697 ChimerSeq STARFusion TCGA_RNA-Seq COG5-ATP5C1 COG5 chr7 107167682 - ATP5C1 chr10 7848937 + Exonic hg19 SKCM TCGA-EE-A2MH-06A 2 1 Out-of-frame Inter-chr p14 45698 ChimerSeq STARFusion TCGA_RNA-Seq DEPDC5-GGNBP2 DEPDC5 chr22 32156688 + GGNBP2 chr17 34934413 + Exonic hg19 SKCM TCGA-EE-A2MH-06A 2 1 Out-of-frame Inter-chr q12.2 Tumor suppressor gene 45699 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 SKCM TCGA-EE-A2MH-06A 2 0 In-Frame Intra-chr p11.21 p11.21 45700 ChimerSeq STARFusion TCGA_RNA-Seq PAK1IP1-MEP1A PAK1IP1 chr6 10702872 + MEP1A chr6 46787266 + Exonic hg19 SKCM TCGA-GN-A268-06A 27 183 In-Frame Intra-chr p24.2 p12.3 Seq+ 45701 ChimerSeq STARFusion TCGA_RNA-Seq PAK1IP1-MEP1A PAK1IP1 chr6 10702722 + MEP1A chr6 46787266 + Exonic hg19 SKCM TCGA-GN-A268-06A 9 179 In-Frame Intra-chr p24.2 p12.3 Seq+ 45702 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-EIF3K ACTN4 chr19 39138547 + EIF3K chr19 39125633 + Exonic hg19 SKCM TCGA-GN-A268-06A 9 64 Out-of-frame Intra-chr Seq+ 45703 ChimerSeq STARFusion TCGA_RNA-Seq DEK-IGSF3 DEK chr6 18264074 - IGSF3 chr1 117159079 - Exonic hg19 SKCM TCGA-GN-A268-06A 3 19 In-Frame Inter-chr p22.3 Oncogene p13.1 45704 ChimerSeq STARFusion TCGA_RNA-Seq SBF2-MRGPRX3 SBF2 chr11 10315562 - MRGPRX3 chr11 18154161 + Exonic hg19 SKCM TCGA-GN-A268-06A 3 9 CDS-5'UTR Intra-chr p15.4 p15.1 Seq+ 45705 ChimerSeq STARFusion TCGA_RNA-Seq GPR158-KIAA1217 GPR158 chr10 25510086 + KIAA1217 chr10 24802188 + Exonic hg19 SKCM TCGA-EE-A20I-06A 91 306 In-Frame Intra-chr p12.1 p12.2 Seq+ 45706 ChimerSeq STARFusion TCGA_RNA-Seq NRP2-PARD3B NRP2 chr2 206657009 + PARD3B chr2 206418048 + Exonic hg19 SKCM TCGA-EE-A20I-06A 14 45 Out-of-frame Intra-chr q33.3 q33.3 Seq+ 45707 ChimerSeq STARFusion TCGA_RNA-Seq LMBRD2-CTNND2 LMBRD2 chr5 36108636 - CTNND2 chr5 11365002 - Exonic hg19 SKCM TCGA-EE-A20I-06A 16 30 In-Frame Intra-chr p13.2 p15.2 Seq+ 45708 ChimerSeq STARFusion TCGA_RNA-Seq MKLN1-CDK14 MKLN1 chr7 131082135 + CDK14 chr7 90376996 + Exonic hg19 SKCM TCGA-EE-A20I-06A 9 34 In-Frame Intra-chr q32.3 q21.13 Seq+ 45709 ChimerSeq STARFusion TCGA_RNA-Seq BBX-TBC1D23 BBX chr3 107245245 + TBC1D23 chr3 100002451 + Exonic hg19 SKCM TCGA-EE-A20I-06A 5 27 5'UTR-CDS Intra-chr q13.12 Transcription factor q12.1 Seq+ 45710 ChimerSeq STARFusion TCGA_RNA-Seq CHCHD3-MKLN1 CHCHD3 chr7 132754902 - MKLN1 chr7 131096065 + Exonic hg19 SKCM TCGA-EE-A20I-06A 4 18 In-Frame Intra-chr q33 Transcription factor q32.3 Seq+ 45711 ChimerSeq STARFusion TCGA_RNA-Seq MKLN1-GRM8 MKLN1 chr7 131096142 + GRM8 chr7 126883569 - Exonic hg19 SKCM TCGA-EE-A20I-06A 3 21 CDS-5'UTR Intra-chr q32.3 q31.33 Oncogene Seq+ 45712 ChimerSeq STARFusion TCGA_RNA-Seq PCDHGB3-JMJD1C PCDHGB3 chr5 140752376 + JMJD1C chr10 65024524 - Exonic hg19 SKCM TCGA-EE-A20I-06A 2 19 In-Frame Inter-chr q31.3 q21.3 45713 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-BASP1 NIPBL chr5 37001180 + BASP1 chr5 17275317 + Exonic hg19 SKCM TCGA-EE-A20I-06A 2 18 CDS-5'UTR Intra-chr p13.2 p15.1 Tumor suppressor gene Seq+ 45714 ChimerSeq STARFusion TCGA_RNA-Seq FGD4-BICD1 FGD4 chr12 32729383 + BICD1 chr12 32530474 + Exonic hg19 SKCM TCGA-EE-A20I-06A 2 10 In-Frame Intra-chr p11.21 p11.21 Seq+ 45715 ChimerSeq STARFusion TCGA_RNA-Seq LMBRD2-KIAA0947 LMBRD2 chr5 36110047 - KIAA0947 chr5 5457793 + Exonic hg19 SKCM TCGA-EE-A20I-06A 3 5 Out-of-frame Intra-chr p13.2 45716 ChimerSeq STARFusion TCGA_RNA-Seq ZNF438-CDC123 ZNF438 chr10 31320762 - CDC123 chr10 12279143 + Exonic hg19 SKCM TCGA-EE-A20I-06A 3 5 5'UTR-CDS Intra-chr p11.23 Transcription factor p14 45717 ChimerSeq STARFusion TCGA_RNA-Seq PALD1-ADD3 PALD1 chr10 72238815 + ADD3 chr10 111860383 + Exonic hg19 SKCM TCGA-EE-A20I-06A 3 0 Out-of-frame Intra-chr q22.1 q25.1 45718 ChimerSeq STARFusion TCGA_RNA-Seq PCDHGA4-JMJD1C PCDHGA4 chr5 140737188 + JMJD1C chr10 65024524 - Exonic hg19 SKCM TCGA-EE-A20I-06A 2 4 In-Frame Inter-chr q31.3 q21.3 45719 ChimerSeq STARFusion TCGA_RNA-Seq PTPRZ1-DOCK4 PTPRZ1 chr7 121624171 + DOCK4 chr7 111644186 - Exonic hg19 SKCM TCGA-EE-A20I-06A 2 4 In-Frame Intra-chr q31.32 q31.1 Seq+ 45720 ChimerSeq STARFusion TCGA_RNA-Seq CCDC7-SVIL CCDC7 chr10 32762951 + SVIL chr10 29844037 - Exonic hg19 SKCM TCGA-EE-A20I-06A 2 1 CDS-5'UTR Intra-chr p11.22 p11.23 45721 ChimerSeq STARFusion TCGA_RNA-Seq RB1-ITM2B RB1 chr13 48955579 + ITM2B chr13 48827944 + Exonic hg19 SKCM TCGA-EE-A20I-06A 2 1 In-Frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Seq+ 45722 ChimerSeq STARFusion TCGA_RNA-Seq ATF7-CLIP2 ATF7 chr12 54020063 - CLIP2 chr7 73770740 + Exonic hg19 SKCM TCGA-EE-A20I-06A 2 0 5'UTR-CDS Inter-chr q13.13 Transcription factor q11.23 45723 ChimerSeq STARFusion TCGA_RNA-Seq SPARC-IGHM SPARC chr5 151045943 - IGHM chr14 106322057 - Exonic hg19 SKCM TCGA-HR-A2OG-06A 3 21 Out-of-frame Inter-chr q33.1 Tumor suppressor gene q32.33 45724 ChimerSeq STARFusion TCGA_RNA-Seq RPS2-IGKC RPS2 chr16 2012222 - IGKC chr2 89156828 - Exonic hg19 SKCM TCGA-HR-A2OG-06A 3 12 Out-of-frame Inter-chr p13.3 p11.2 45725 ChimerSeq STARFusion TCGA_RNA-Seq MLLT10-SLC16A1 MLLT10 chr10 21823733 + SLC16A1 chr1 113471974 - Exonic hg19 SKCM TCGA-RP-A695-06A 13 45 CDS-5'UTR Inter-chr p12.31 Oncogene Seq+ 45726 ChimerSeq STARFusion TCGA_RNA-Seq ARID1A-PRPF40B ARID1A chr1 27059283 + PRPF40B chr12 49977345 + Exonic hg19 SKCM TCGA-RP-A695-06A 6 44 CDS-5'UTR Inter-chr p36.11 Oncogene Tumor suppressor gene q13.12 Seq+ 45727 ChimerSeq STARFusion TCGA_RNA-Seq APBA2-SOAT2 APBA2 chr15 29288009 + SOAT2 chr12 53512564 + Exonic hg19 SKCM TCGA-RP-A695-06A 6 43 5'UTR-CDS Inter-chr q13.13 Seq+ 45728 ChimerSeq STARFusion TCGA_RNA-Seq APBA2-SOAT2 APBA2 chr15 29288009 + SOAT2 chr12 53512674 + Exonic hg19 SKCM TCGA-RP-A695-06A 5 42 5'UTR-CDS Inter-chr q13.13 Seq+ 45729 ChimerSeq STARFusion TCGA_RNA-Seq ARID1A-PRPF40B ARID1A chr1 27059283 + PRPF40B chr12 49997960 + Exonic hg19 SKCM TCGA-RP-A695-06A 2 44 CDS-5'UTR Inter-chr p36.11 Oncogene Tumor suppressor gene q13.12 Seq+ 45730 ChimerSeq STARFusion TCGA_RNA-Seq ICAM1-RN7SL2 ICAM1 chr19 10397123 + RN7SL2 chr14 50329500 - Exonic hg19 SKCM TCGA-RP-A695-06A 3 34 Out-of-frame Inter-chr p13.2 q21.3 45731 ChimerSeq STARFusion TCGA_RNA-Seq HERC2P10-IGFBP6 HERC2P10 chr15 31125101 + IGFBP6 chr12 53494496 + Exonic hg19 SKCM TCGA-RP-A695-06A 3 17 Out-of-frame Inter-chr q13.2 q13.13 45732 ChimerSeq STARFusion TCGA_RNA-Seq JAZF1-TAX1BP1 JAZF1 chr7 27880317 - TAX1BP1 chr7 27867357 + Exonic hg19 SKCM TCGA-EB-A5UN-06A 2 4 In-Frame Intra-chr p15.1 Transcription factor p15.2 Seq+ 45733 ChimerSeq STARFusion TCGA_RNA-Seq IRF2-ENPP6 IRF2 chr4 185395533 - ENPP6 chr4 185074886 - Exonic hg19 SKCM TCGA-GF-A769-01A 23 107 5'UTR-CDS Intra-chr q35.1 Transcription factor q35.1 Seq+ 45734 ChimerSeq STARFusion TCGA_RNA-Seq MTSS1-WHSC1L1 MTSS1 chr8 125711767 - WHSC1L1 chr8 38205733 - Exonic hg19 SKCM TCGA-GF-A769-01A 17 74 CDS-5'UTR Intra-chr q24.13 Tumor suppressor gene p11.23 Tumor suppressor gene Seq+ 45735 ChimerSeq STARFusion TCGA_RNA-Seq LRP1-TMEM194A LRP1 chr12 57537581 + TMEM194A chr12 57466695 - Exonic hg19 SKCM TCGA-GF-A769-01A 5 34 In-Frame Intra-chr q13.3 Seq+ 45736 ChimerSeq STARFusion TCGA_RNA-Seq ZMAT3-TP63 ZMAT3 chr3 178785271 - TP63 chr3 189455529 + Exonic hg19 SKCM TCGA-GF-A769-01A 7 17 Out-of-frame Intra-chr q26.32 q28 Tumor suppressor gene Transcription factor Seq+ 45737 ChimerSeq STARFusion TCGA_RNA-Seq ZNF101-NDUFA13 ZNF101 chr19 19779775 + NDUFA13 chr19 19636991 + Exonic hg19 SKCM TCGA-D9-A6EA-06A 2 19 Out-of-frame Intra-chr p13.11 Transcription factor p13.11 Seq+ 45738 ChimerSeq STARFusion TCGA_RNA-Seq TTYH3-MAD1L1 TTYH3 chr7 2671912 + MAD1L1 chr7 1855864 - Exonic hg19 SKCM TCGA-D9-A6EA-06A 2 8 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 45739 ChimerSeq STARFusion TCGA_RNA-Seq AP2A2-TOLLIP AP2A2 chr11 926088 + TOLLIP chr11 1298483 - Exonic hg19 SKCM TCGA-FS-A1ZA-06A 26 95 In-Frame Intra-chr p15.5 p15.5 Seq+ 45740 ChimerSeq STARFusion TCGA_RNA-Seq LYN-TGS1 LYN chr8 56879456 + TGS1 chr8 56723440 + Exonic hg19 SKCM TCGA-FS-A1ZA-06A 10 19 In-Frame Intra-chr q12.1 TK:Src q12.1 Tumor suppressor gene 45741 ChimerSeq STARFusion TCGA_RNA-Seq FMNL2-PRPF40A FMNL2 chr2 153192234 + PRPF40A chr2 153537850 - Exonic hg19 SKCM TCGA-FS-A1ZA-06A 2 1 In-Frame Intra-chr q23.3 q23.3 45742 ChimerSeq STARFusion TCGA_RNA-Seq LINGO2-PTEN LINGO2 chr9 29212920 - PTEN chr10 89711875 + Exonic hg19 SKCM TCGA-DA-A3F8-06A 2 7 5'UTR-CDS Inter-chr p21.1 q23.31 Oncogene Tumor suppressor gene 45743 ChimerSeq STARFusion TCGA_RNA-Seq LINGO2-PTEN LINGO2 chr9 29212920 - PTEN chr10 89717610 + Exonic hg19 SKCM TCGA-DA-A3F8-06A 2 7 5'UTR-CDS Inter-chr p21.1 q23.31 Oncogene Tumor suppressor gene 45744 ChimerSeq STARFusion TCGA_RNA-Seq PACSIN2-STMN1 PACSIN2 chr22 43411027 - STMN1 chr1 26228173 - Exonic hg19 SKCM TCGA-DA-A3F8-06A 2 1 5'UTR-CDS Inter-chr q13.2 p36.11 45745 ChimerSeq STARFusion TCGA_RNA-Seq TDRD3-CUL4A TDRD3 chr13 60971539 + CUL4A chr13 113907396 + Exonic hg19 SKCM TCGA-D3-A5GR-06A 358 972 Out-of-frame Intra-chr q21.2 q34 Seq+ 45746 ChimerSeq STARFusion TCGA_RNA-Seq TDRD3-CUL4A TDRD3 chr13 60971144 + CUL4A chr13 113907396 + Exonic hg19 SKCM TCGA-D3-A5GR-06A 43 968 5'UTR-CDS Intra-chr q21.2 q34 Seq+ 45747 ChimerSeq STARFusion TCGA_RNA-Seq KATNAL1-CUL4A KATNAL1 chr13 30857753 - CUL4A chr13 113907396 + Exonic hg19 SKCM TCGA-D3-A5GR-06A 99 447 In-Frame Intra-chr q12.3 q34 Seq+ 45748 ChimerSeq STARFusion TCGA_RNA-Seq KATNAL1-LINC00347 KATNAL1 chr13 30857753 - LINC00347 chr13 75125317 + Exonic hg19 SKCM TCGA-D3-A5GR-06A 63 394 CDS-5'UTR Intra-chr q12.3 q22.1 45749 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-GAPDHP69 IGH@ chr14 106579076 - GAPDHP69 chr13 29881409 + Exonic hg19 SKCM TCGA-D3-A5GR-06A 14 1 Out-of-frame Inter-chr 32.33 q12.3 45750 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ITGA3 IGH@ chr14 107169930 - ITGA3 chr17 48141247 + Exonic hg19 SKCM TCGA-D3-A5GR-06A 11 2 Out-of-frame Inter-chr 32.33 q21.33 45751 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ITGA3 IGH@ chr14 107083255 - ITGA3 chr17 48141247 + Exonic hg19 SKCM TCGA-D3-A5GR-06A 8 2 Out-of-frame Inter-chr 32.33 q21.33 45752 ChimerSeq STARFusion TCGA_RNA-Seq GPNMB-IGH@ GPNMB chr7 23312717 + IGH@ chr14 106330058 - Exonic hg19 SKCM TCGA-D3-A5GR-06A 4 5 Out-of-frame Inter-chr p15.3 32.33 45753 ChimerSeq STARFusion TCGA_RNA-Seq LAMP1-LINC00347 LAMP1 chr13 113973971 + LINC00347 chr13 75125317 + Exonic hg19 SKCM TCGA-D3-A5GR-06A 2 7 CDS-5'UTR Intra-chr q34 Oncogene q22.1 45754 ChimerSeq STARFusion TCGA_RNA-Seq RIPK1-SERPINB9 RIPK1 chr6 3064293 + SERPINB9 chr6 2900855 - Exonic hg19 SKCM TCGA-D3-A1Q8-06A 8 2 5'UTR-5'UTR Intra-chr p25.2 TKL:RIPK p25.2 45755 ChimerSeq STARFusion TCGA_RNA-Seq SRRM2-BCAR4 SRRM2 chr16 2810500 + BCAR4 chr16 11922248 - Exonic hg19 SKCM TCGA-GN-A266-06A 2 21 CDS-3'UTR Intra-chr p13.3 p13.13 Seq+ 45756 ChimerSeq STARFusion TCGA_RNA-Seq SRRM2-BCAR4 SRRM2 chr16 2810500 + BCAR4 chr16 11915612 - Exonic hg19 SKCM TCGA-GN-A266-06A 2 20 CDS-3'UTR Intra-chr p13.3 p13.13 Seq+ 45757 ChimerSeq STARFusion TCGA_RNA-Seq GFPT1-NFU1 GFPT1 chr2 69614197 - NFU1 chr2 69633214 - Exonic hg19 SKCM TCGA-GN-A266-06A 3 15 In-Frame Intra-chr p13.3 p13.3 Seq+ 45758 ChimerSeq STARFusion TCGA_RNA-Seq STEAP1B-RAPGEF5 STEAP1B chr7 22532184 - RAPGEF5 chr7 22357656 - Exonic hg19 SKCM TCGA-GN-A266-06A 3 7 CDS-5'UTR Intra-chr p15.3 p15.3 45759 ChimerSeq STARFusion TCGA_RNA-Seq DCP2-C8orf34 DCP2 chr5 112312683 + C8orf34 chr8 69728121 + Exonic hg19 SKCM TCGA-BF-AAP6-01A 10 310 Out-of-frame Inter-chr q22.2 q13.2 Seq+ 45760 ChimerSeq STARFusion TCGA_RNA-Seq APC-SLC27A6 APC chr5 112043579 + SLC27A6 chr5 128364038 + Exonic hg19 SKCM TCGA-BF-AAP6-01A 22 72 Out-of-frame Intra-chr q22.2 Oncogene Tumor suppressor gene q23.3 Seq+ 45761 ChimerSeq STARFusion TCGA_RNA-Seq ABCA1-ZNF483 ABCA1 chr9 107645320 - ZNF483 chr9 114338645 + Exonic hg19 SKCM TCGA-BF-AAP6-01A 17 58 In-Frame Intra-chr q31.1 q31.3 Transcription factor Seq+ 45762 ChimerSeq STARFusion TCGA_RNA-Seq ACACB-UNG ACACB chr12 109665294 + UNG chr12 109547634 + Exonic hg19 SKCM TCGA-BF-AAP6-01A 22 20 3'UTR-CDS Intra-chr q24.11 q24.11 Seq+ 45763 ChimerSeq STARFusion TCGA_RNA-Seq ADCY2-PARP8 ADCY2 chr5 7784562 + PARP8 chr5 50055477 + Exonic hg19 SKCM TCGA-BF-AAP6-01A 3 65 Out-of-frame Intra-chr p15.31 q11.1 Seq+ 45764 ChimerSeq STARFusion TCGA_RNA-Seq GUSBP3-TARS GUSBP3 chr5 68974972 - TARS chr5 33466976 + Exonic hg19 SKCM TCGA-BF-AAP6-01A 3 11 3'UTR-CDS Intra-chr q13.2 p13.3 45765 ChimerSeq STARFusion TCGA_RNA-Seq IRX1-ADAMTS16 IRX1 chr5 3596495 + ADAMTS16 chr5 5182157 + Exonic hg19 SKCM TCGA-BF-AAP6-01A 2 12 In-Frame Intra-chr p15.33 Tumor suppressor gene Transcription factor p15.32 Seq+ 45766 ChimerSeq STARFusion TCGA_RNA-Seq SEMA3C-PPP1R12C SEMA3C chr7 80418622 - PPP1R12C chr19 55614936 - Exonic hg19 SKCM TCGA-D3-A1Q4-06A 8 174 In-Frame Inter-chr q21.11 q13.42 Seq+ 45767 ChimerSeq STARFusion TCGA_RNA-Seq WWP1-ESRP1 WWP1 chr8 87355159 + ESRP1 chr8 95674729 + Exonic hg19 SKCM TCGA-D3-A1Q4-06A 20 36 5'UTR-CDS Intra-chr q21.3 q22.1 Tumor suppressor gene Seq+ 45768 ChimerSeq STARFusion TCGA_RNA-Seq NDUFAF6-LRRCC1 NDUFAF6 chr8 95993201 + LRRCC1 chr8 86042154 + Exonic hg19 SKCM TCGA-D3-A1Q4-06A 4 39 Out-of-frame Intra-chr q22.1 q21.2 Seq+ 45769 ChimerSeq STARFusion TCGA_RNA-Seq ME1-IRF5P1 ME1 chr6 83985835 - IRF5P1 chr8 93985242 + Exonic hg19 SKCM TCGA-D3-A1Q4-06A 3 5 Out-of-frame Inter-chr q14.2 q22.1 45770 ChimerSeq STARFusion TCGA_RNA-Seq PNPLA6-ATP13A1 PNPLA6 chr19 7607970 + ATP13A1 chr19 19756341 - Exonic hg19 SKCM TCGA-EE-A2MG-06A 32 332 In-Frame Intra-chr p13.2 p13.11 Seq+ 45771 ChimerSeq STARFusion TCGA_RNA-Seq TNRC18-TSGA13 TNRC18 chr7 5413686 - TSGA13 chr7 130356628 - Exonic hg19 SKCM TCGA-FS-A1ZY-06A 5 37 Out-of-frame Intra-chr p22.1 q32.2 Seq+ 45772 ChimerSeq STARFusion TCGA_RNA-Seq TNRC18-TSGA13 TNRC18 chr7 5413686 - TSGA13 chr7 130357716 - Exonic hg19 SKCM TCGA-FS-A1ZY-06A 2 37 Out-of-frame Intra-chr p22.1 q32.2 Seq+ 45773 ChimerSeq STARFusion TCGA_RNA-Seq LOC148709-ACTG1 LOC148709 chr1 202843775 + ACTG1 chr17 79477379 - Exonic hg19 SKCM TCGA-FS-A1ZY-06A 3 1 Out-of-frame Inter-chr q25.3 45774 ChimerSeq STARFusion TCGA_RNA-Seq MMP17-NOC4L MMP17 chr12 132313198 + NOC4L chr12 132635526 + Exonic hg19 SKCM TCGA-FS-A1ZY-06A 2 1 Out-of-frame Intra-chr q24.33 q24.33 Seq+ 45775 ChimerSeq STARFusion TCGA_RNA-Seq SPTBN1-STX8 SPTBN1 chr2 54753703 + STX8 chr17 9281970 - Exonic hg19 SKCM TCGA-D3-A2JA-06A 15 49 In-Frame Inter-chr p16.2 Tumor suppressor gene p13.1 Seq+ 45776 ChimerSeq STARFusion TCGA_RNA-Seq C3orf67-CRTAP C3orf67 chr3 59025283 - CRTAP chr3 33183887 + Exonic hg19 SKCM TCGA-D3-A2JA-06A 2 8 5'UTR-CDS Intra-chr p14.2 p22.3 Seq+ 45777 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 SKCM TCGA-D3-A2JA-06A 3 3 In-Frame Intra-chr p11.21 p11.21 45778 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54952116 + MAGED2 chrX 54839378 + Exonic hg19 SKCM TCGA-D3-A2JA-06A 2 3 In-Frame Intra-chr p11.21 p11.21 45779 ChimerSeq STARFusion TCGA_RNA-Seq LOC100128675-LGI4 LOC100128675 chr19 35597133 - LGI4 chr19 35622946 - Exonic hg19 SKCM TCGA-D3-A2JA-06A 2 2 3'UTR-CDS Intra-chr q13.12 45780 ChimerSeq STARFusion TCGA_RNA-Seq EDEM2-UQCC1 EDEM2 chr20 33859808 - UQCC1 chr20 33935075 - Exonic hg19 SKCM TCGA-EB-A431-01A 7 32 Out-of-frame Intra-chr q11.22 q11.22 45781 ChimerSeq STARFusion TCGA_RNA-Seq FGFR1OP-ABCC4 FGFR1OP chr6 167417299 + ABCC4 chr13 95847191 - Exonic hg19 SKCM TCGA-EB-A431-01A 7 26 In-Frame Inter-chr q27 q32.1 Seq+ 45782 ChimerSeq STARFusion TCGA_RNA-Seq RAB21-IGL@ RAB21 chr12 72183377 + IGL@ chr22 23235961 + Exonic hg19 SKCM TCGA-EB-A5UL-06A 18 1 Out-of-frame Inter-chr q21.1 q11.22 45783 ChimerSeq STARFusion TCGA_RNA-Seq ALDH3A2-IGH@ ALDH3A2 chr17 19577476 + IGH@ chr14 106330067 - Exonic hg19 SKCM TCGA-EB-A5UL-06A 14 1 Out-of-frame Inter-chr p11.2 32.33 45784 ChimerSeq STARFusion TCGA_RNA-Seq R3HCC1L-PCBP2 R3HCC1L chr10 99946320 + PCBP2 chr12 53873190 + Exonic hg19 SKCM TCGA-EB-A5UL-06A 6 30 Out-of-frame Inter-chr q24.2 q13.13 Seq+ 45785 ChimerSeq STARFusion TCGA_RNA-Seq R3HCC1L-PCBP2 R3HCC1L chr10 99923154 + PCBP2 chr12 53873190 + Exonic hg19 SKCM TCGA-EB-A5UL-06A 4 24 Out-of-frame Inter-chr q24.2 q13.13 Seq+ 45786 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CHD1L IGH@ chr14 106815721 - CHD1L chr1 146743827 + Exonic hg19 SKCM TCGA-EB-A5UL-06A 9 1 Out-of-frame Inter-chr 32.33 q21.1 45787 ChimerSeq STARFusion TCGA_RNA-Seq PCBP2-R3HCC1L PCBP2 chr12 53865591 + R3HCC1L chr10 99967858 + Exonic hg19 SKCM TCGA-EB-A5UL-06A 6 12 Out-of-frame Inter-chr q13.13 q24.2 Seq+ 45788 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-COPG1 IGH@ chr14 106791004 - COPG1 chr3 128990594 + Exonic hg19 SKCM TCGA-EB-A5UL-06A 4 8 Out-of-frame Inter-chr 32.33 q21.3 45789 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3B-PGM5 FNDC3B chr3 171851336 + PGM5 chr9 71094334 + Exonic hg19 SKCM TCGA-EB-A5UL-06A 2 7 In-Frame Inter-chr q26.31 q21.11 Seq+ 45790 ChimerSeq STARFusion TCGA_RNA-Seq ATP11A-CUL4A ATP11A chr13 113530255 + CUL4A chr13 113917801 + Exonic hg19 SKCM TCGA-EB-A5UL-06A 2 6 In-Frame Intra-chr q34 q34 Seq+ 45791 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3B-SUCNR1 FNDC3B chr3 171851336 + SUCNR1 chr3 151597640 + Exonic hg19 SKCM TCGA-EB-A5UL-06A 2 6 CDS-5'UTR Intra-chr q26.31 q25.1 Seq+ 45792 ChimerSeq STARFusion TCGA_RNA-Seq CEP72-TAS2R1 CEP72 chr5 620376 + TAS2R1 chr5 9630104 - Exonic hg19 SKCM TCGA-D9-A4Z2-01A 4 45 In-Frame Intra-chr p15.31 Seq+ 45793 ChimerSeq STARFusion TCGA_RNA-Seq CEP72-LOC285692 CEP72 chr5 624694 + LOC285692 chr5 9659693 - Exonic hg19 SKCM TCGA-D9-A4Z2-01A 2 17 CDS-3'UTR Intra-chr 45794 ChimerSeq STARFusion TCGA_RNA-Seq LOC642236-FRG1B LOC642236 chr9 68438563 - FRG1B chr20 29625871 + Exonic hg19 SKCM TCGA-D9-A4Z2-01A 3 8 Out-of-frame Inter-chr 45795 ChimerSeq STARFusion TCGA_RNA-Seq MINOS1-DENND2C MINOS1 chr1 19923603 + DENND2C chr1 115130573 - Exonic hg19 SKCM TCGA-D3-A3MO-06A 76 223 In-Frame Intra-chr p36.13 p13.2 Seq+ 45796 ChimerSeq STARFusion TCGA_RNA-Seq MINOS1-DENND2C MINOS1 chr1 19923603 + DENND2C chr1 115130576 - Exonic hg19 SKCM TCGA-D3-A3MO-06A 10 223 5'UTR-CDS Intra-chr p36.13 p13.2 Seq+ 45797 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-DENND2C NFAT5 chr16 69600277 + DENND2C chr1 115130573 - Exonic hg19 SKCM TCGA-D3-A3MO-06A 13 70 In-Frame Inter-chr q22.1 Transcription factor p13.2 Seq+ 45798 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-DENND2C NFAT5 chr16 69602451 + DENND2C chr1 115130573 - Exonic hg19 SKCM TCGA-D3-A3MO-06A 3 70 In-Frame Inter-chr q22.1 Transcription factor p13.2 Seq+ 45799 ChimerSeq STARFusion TCGA_RNA-Seq AMBRA1-HARBI1 AMBRA1 chr11 46615378 - HARBI1 chr11 46637931 - Exonic hg19 SKCM TCGA-D3-A3MO-06A 6 22 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 45800 ChimerSeq STARFusion TCGA_RNA-Seq LRP12-RALGPS1 LRP12 chr8 105601047 - RALGPS1 chr9 129724504 + Exonic hg19 SKCM TCGA-D3-A3MO-06A 4 28 CDS-5'UTR Inter-chr q22.3 q33.3 Seq+ 45801 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KA4-TEX40 RPS6KA4 chr11 64126921 + TEX40 chr11 64070954 + Exonic hg19 SKCM TCGA-EB-A82B-01A 223 834 Out-of-frame Intra-chr q13.1 Seq+ 45802 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KA4-TEX40 RPS6KA4 chr11 64126921 + TEX40 chr11 64071245 + Exonic hg19 SKCM TCGA-EB-A82B-01A 32 834 Out-of-frame Intra-chr q13.1 Seq+ 45803 ChimerSeq STARFusion TCGA_RNA-Seq AHDC1-DNAJC8 AHDC1 chr1 27929908 - DNAJC8 chr1 28537148 - Exonic hg19 SKCM TCGA-EB-A82B-01A 18 127 5'UTR-CDS Intra-chr p35.3 Transcription factor p35.3 Seq+ 45804 ChimerSeq STARFusion TCGA_RNA-Seq RGS20-MCPH1 RGS20 chr8 54793644 + MCPH1 chr8 6335115 + Exonic hg19 SKCM TCGA-EB-A82B-01A 10 45 In-Frame Intra-chr q11.23 p23.1 Tumor suppressor gene Seq+ 45805 ChimerSeq STARFusion TCGA_RNA-Seq YAP1-MRPL48 YAP1 chr11 102033302 + MRPL48 chr11 73574217 + Exonic hg19 SKCM TCGA-EB-A82B-01A 3 57 Out-of-frame Intra-chr q22.1 Tumor suppressor gene q13.4 Seq+ 45806 ChimerSeq STARFusion TCGA_RNA-Seq RGS20-MCPH1 RGS20 chr8 54792162 + MCPH1 chr8 6335115 + Exonic hg19 SKCM TCGA-EB-A82B-01A 2 45 In-Frame Intra-chr q11.23 p23.1 Tumor suppressor gene Seq+ 45807 ChimerSeq STARFusion TCGA_RNA-Seq RGS20-MCPH1 RGS20 chr8 54793644 + MCPH1 chr8 6338235 + Exonic hg19 SKCM TCGA-EB-A82B-01A 2 45 Out-of-frame Intra-chr q11.23 p23.1 Tumor suppressor gene Seq+ 45808 ChimerSeq STARFusion TCGA_RNA-Seq RGS20-MCPH1 RGS20 chr8 54793644 + MCPH1 chr8 6357373 + Exonic hg19 SKCM TCGA-EB-A82B-01A 2 45 In-Frame Intra-chr q11.23 p23.1 Tumor suppressor gene Seq+ 45809 ChimerSeq STARFusion TCGA_RNA-Seq FEN1-GDPD4 FEN1 chr11 61560500 + GDPD4 chr11 76940277 - Exonic hg19 SKCM TCGA-EB-A82B-01A 5 20 5'UTR-CDS Intra-chr q12.2 q13.5 Seq+ 45810 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-BAI1 PTPN12 chr7 77266365 + BAI1 chr8 143599499 + Exonic hg19 SKCM TCGA-EB-A82B-01A 4 18 Out-of-frame Inter-chr q11.23 Tumor suppressor gene Seq+ 45811 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D15-RAB21 TBC1D15 chr12 72274387 + RAB21 chr12 72175811 + Exonic hg19 SKCM TCGA-EB-A82B-01A 5 11 In-Frame Intra-chr q21.1 q21.1 45812 ChimerSeq STARFusion TCGA_RNA-Seq PAK1-LOC100130987 PAK1 chr11 77184597 - LOC100130987 chr11 67155006 + Exonic hg19 SKCM TCGA-EB-A82B-01A 5 8 5'UTR-5'UTR Intra-chr q14.1 STE:STE20 45813 ChimerSeq STARFusion TCGA_RNA-Seq GOT2-MMP2 GOT2 chr16 58752100 - MMP2 chr16 55516821 + Exonic hg19 SKCM TCGA-EB-A82B-01A 3 9 In-Frame Intra-chr q21 q12.2 Oncogene Seq+ 45814 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D15-RAB21 TBC1D15 chr12 72278801 + RAB21 chr12 72175811 + Exonic hg19 SKCM TCGA-EB-A82B-01A 2 11 Out-of-frame Intra-chr q21.1 q21.1 45815 ChimerSeq STARFusion TCGA_RNA-Seq DYM-RPL17 DYM chr18 46986768 - RPL17 chr18 47018922 - Exonic hg19 SKCM TCGA-EE-A29E-06A 4 33 5'UTR-5'UTR Intra-chr q21.1 q21.1 Seq+ 45816 ChimerSeq STARFusion TCGA_RNA-Seq DYM-RPL17 DYM chr18 46986768 - RPL17 chr18 47017954 - Exonic hg19 SKCM TCGA-EE-A29E-06A 3 33 5'UTR-5'UTR Intra-chr q21.1 q21.1 Seq+ 45817 ChimerSeq STARFusion TCGA_RNA-Seq NOS1AP-GNG12 NOS1AP chr1 162124266 + GNG12 chr1 68243190 - Exonic hg19 SKCM TCGA-EE-A29E-06A 2 3 CDS-5'UTR Intra-chr q23.3 p31.3 45818 ChimerSeq STARFusion TCGA_RNA-Seq TET3-IGH@ TET3 chr2 74329256 + IGH@ chr14 106175004 - Exonic hg19 SKCM TCGA-GN-A26C-01A 15 1 Out-of-frame Inter-chr p13.1 Transcription factor 32.33 45819 ChimerSeq STARFusion TCGA_RNA-Seq DIP2B-IGKC DIP2B chr12 51084877 + IGKC chr2 89160435 - Exonic hg19 SKCM TCGA-EE-A3JA-06A 3 2 Out-of-frame Inter-chr q13.12 p11.2 45820 ChimerSeq STARFusion TCGA_RNA-Seq CTNND1-PACS1 CTNND1 chr11 57529518 + PACS1 chr11 65960957 + Exonic hg19 SKCM TCGA-D3-A2JB-06A 18 111 5'UTR-CDS Intra-chr q12.1 Tumor suppressor gene q13.1 Seq+ 45821 ChimerSeq STARFusion TCGA_RNA-Seq CTNND1-PACS1 CTNND1 chr11 57556627 + PACS1 chr11 65960957 + Exonic hg19 SKCM TCGA-D3-A2JB-06A 4 111 5'UTR-CDS Intra-chr q12.1 Tumor suppressor gene q13.1 Seq+ 45822 ChimerSeq STARFusion TCGA_RNA-Seq SMYD2-LPGAT1 SMYD2 chr1 214498051 + LPGAT1 chr1 211924409 - Exonic hg19 SKCM TCGA-D3-A2JB-06A 5 9 In-Frame Intra-chr q32.3 q32.3 Seq+ 45823 ChimerSeq STARFusion TCGA_RNA-Seq TRIM48-ADAMTS16 TRIM48 chr11 55029787 + ADAMTS16 chr5 5262770 + Exonic hg19 SKCM TCGA-D3-A2JB-06A 4 11 Out-of-frame Inter-chr q11 p15.32 Seq+ 45824 ChimerSeq STARFusion TCGA_RNA-Seq RELT-P4HA3 RELT chr11 73087544 + P4HA3 chr11 74015457 - Exonic hg19 SKCM TCGA-D3-A2JB-06A 3 0 5'UTR-CDS Intra-chr q13.4 q13.4 45825 ChimerSeq STARFusion TCGA_RNA-Seq LCP2-SLC34A1 LCP2 chr5 169701305 - SLC34A1 chr5 176820695 + Exonic hg19 SKCM TCGA-EE-A2GJ-06A 20 48 In-Frame Intra-chr q35.1 q35.3 Seq+ 45826 ChimerSeq STARFusion TCGA_RNA-Seq PLXNC1-CRADD PLXNC1 chr12 94697827 + CRADD chr12 94072545 + Exonic hg19 SKCM TCGA-WE-A8K1-06A 9 77 5'UTR-5'UTR Intra-chr q22 Tumor suppressor gene q22 Seq+ 45827 ChimerSeq STARFusion TCGA_RNA-Seq WDR76-IDH3A WDR76 chr15 44120564 + IDH3A chr15 78461264 + Exonic hg19 SKCM TCGA-WE-A8K1-06A 4 77 In-Frame Intra-chr q15.3 q25.1 Seq+ 45828 ChimerSeq STARFusion TCGA_RNA-Seq MRPL48-SUGP2 MRPL48 chr11 73519395 + SUGP2 chr19 19121151 - Exonic hg19 SKCM TCGA-WE-A8K1-06A 5 15 Out-of-frame Inter-chr q13.4 p13.11 Seq+ 45829 ChimerSeq STARFusion TCGA_RNA-Seq GLE1-SLC27A4 GLE1 chr9 131271376 + SLC27A4 chr9 131117677 + Exonic hg19 SKCM TCGA-WE-A8K1-06A 5 13 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 45830 ChimerSeq STARFusion TCGA_RNA-Seq BST2-SLC27A1 BST2 chr19 17514489 - SLC27A1 chr19 17597372 + Exonic hg19 SKCM TCGA-WE-A8K1-06A 2 24 3'UTR-CDS Intra-chr p13.11 p13.11 Seq+ 45831 ChimerSeq STARFusion TCGA_RNA-Seq BST2-SLC27A1 BST2 chr19 17514489 - SLC27A1 chr19 17594691 + Exonic hg19 SKCM TCGA-WE-A8K1-06A 2 24 3'UTR-CDS Intra-chr p13.11 p13.11 Seq+ 45832 ChimerSeq STARFusion TCGA_RNA-Seq MRPL48-SUGP2 MRPL48 chr11 73516124 + SUGP2 chr19 19121151 - Exonic hg19 SKCM TCGA-WE-A8K1-06A 3 15 In-Frame Inter-chr q13.4 p13.11 Seq+ 45833 ChimerSeq STARFusion TCGA_RNA-Seq TCHP-MYO1H TCHP chr12 110338231 + MYO1H chr12 109826488 + Exonic hg19 SKCM TCGA-WE-A8K1-06A 3 5 5'UTR-5'UTR Intra-chr q24.11 Tumor suppressor gene q24.11 Seq+ 45834 ChimerSeq STARFusion TCGA_RNA-Seq FARS2-CDYL FARS2 chr6 5261893 + CDYL chr6 4891947 + Exonic hg19 SKCM TCGA-WE-A8K1-06A 2 7 5'UTR-5'UTR Intra-chr p25.1 p25.1 Seq+ 45835 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTSL1-WNT5B ADAMTSL1 chr9 18474293 + WNT5B chr12 1740464 + Exonic hg19 SKCM TCGA-FR-A7U9-06A 18 49 CDS-5'UTR Inter-chr p22.2 p13.33 Seq+ 45836 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-CDH17 VPS13B chr8 100050794 + CDH17 chr8 95189949 - Exonic hg19 SKCM TCGA-FR-A7U9-06A 7 11 In-Frame Intra-chr q22.2 q22.1 Tumor suppressor gene Seq+ 45837 ChimerSeq STARFusion TCGA_RNA-Seq MTCH2-NDUFS3 MTCH2 chr11 47644253 - NDUFS3 chr11 47603640 + Exonic hg19 SKCM TCGA-FR-A7U9-06A 3 3 In-Frame Intra-chr p11.2 p11.2 Seq+ 45838 ChimerSeq STARFusion TCGA_RNA-Seq GDPD5-SERPINH1 GDPD5 chr11 75188664 - SERPINH1 chr11 75277361 + Exonic hg19 SKCM TCGA-GN-A8LL-06A 30 72 CDS-5'UTR Intra-chr q13.5 q13.5 Seq+ 45839 ChimerSeq STARFusion TCGA_RNA-Seq SCUBE1-LINC00301 SCUBE1 chr22 43735110 - LINC00301 chr11 60454383 + Exonic hg19 SKCM TCGA-GN-A8LL-06A 15 41 CDS-5'UTR Inter-chr q13.2 q12.2 45840 ChimerSeq STARFusion TCGA_RNA-Seq SERPINH1-MYO7A SERPINH1 chr11 75278016 + MYO7A chr11 76841635 + Exonic hg19 SKCM TCGA-GN-A8LL-06A 7 15 CDS-5'UTR Intra-chr q13.5 q13.5 Seq+ 45841 ChimerSeq STARFusion TCGA_RNA-Seq NOL12-RAB6A NOL12 chr22 38165382 + RAB6A chr11 73431944 - Exonic hg19 SKCM TCGA-GN-A8LL-06A 4 16 3'UTR-CDS Inter-chr q13.1 q13.4 45842 ChimerSeq STARFusion TCGA_RNA-Seq TRIOBP-RAB6A TRIOBP chr22 38165382 + RAB6A chr11 73431944 - Exonic hg19 SKCM TCGA-GN-A8LL-06A 4 16 In-Frame Inter-chr q13.1 q13.4 Seq+ 45843 ChimerSeq STARFusion TCGA_RNA-Seq LDLRAD3-VWA5B2 LDLRAD3 chr11 36120011 + VWA5B2 chr3 183952419 + Exonic hg19 SKCM TCGA-GN-A8LL-06A 4 12 In-Frame Inter-chr p13 q27.1 Seq+ 45844 ChimerSeq STARFusion TCGA_RNA-Seq SCNM1-SSBP3 SCNM1 chr1 151138679 + SSBP3 chr1 54717533 - Exonic hg19 SKCM TCGA-GN-A8LL-06A 2 5 In-Frame Intra-chr q21.3 p32.3 Seq+ 45845 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-RAB3IP FRS2 chr12 69925836 + RAB3IP chr12 70149164 + Exonic hg19 SKCM TCGA-D9-A1X3-06A 308 1680 5'UTR-5'UTR Intra-chr q15 q15 Seq+ 45846 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-RAB3IP FRS2 chr12 69931763 + RAB3IP chr12 70149164 + Exonic hg19 SKCM TCGA-D9-A1X3-06A 80 1645 5'UTR-5'UTR Intra-chr q15 q15 Seq+ 45847 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1-POLN WHSC1 chr4 1977127 + POLN chr4 2200444 - Exonic hg19 SKCM TCGA-D9-A1X3-06A 30 227 In-Frame Intra-chr Oncogene p16.3 45848 ChimerSeq STARFusion TCGA_RNA-Seq CNOT2-YEATS4 CNOT2 chr12 70736087 + YEATS4 chr12 69756568 + Exonic hg19 SKCM TCGA-D9-A1X3-06A 6 15 In-Frame Intra-chr q15 q15 Seq+ 45849 ChimerSeq STARFusion TCGA_RNA-Seq CAND1-DYRK2 CAND1 chr12 67692875 + DYRK2 chr12 68050886 + Exonic hg19 SKCM TCGA-D9-A1X3-06A 6 12 Out-of-frame Intra-chr q14.3 q15 CMGC:DYRK Seq+ 45850 ChimerSeq STARFusion TCGA_RNA-Seq CLNK-WDR70 CLNK chr4 10542118 - WDR70 chr5 37438024 + Exonic hg19 SKCM TCGA-D9-A1X3-06A 5 12 Out-of-frame Inter-chr p16.1 p13.2 Seq+ 45851 ChimerSeq STARFusion TCGA_RNA-Seq GRIK2-GPC1 GRIK2 chr6 101847268 + GPC1 chr2 241398447 + Exonic hg19 SKCM TCGA-D3-A2JP-06A 5 5 In-Frame Inter-chr q16.3 q37.3 Seq+ 45852 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-PHLDB1 IGH@ chr14 106573231 - PHLDB1 chr11 118526580 + Exonic hg19 SKCM TCGA-D3-A1Q7-06A 178 1 Out-of-frame Inter-chr 32.33 q23.3 45853 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-SYNE2 IGL@ chr22 22453621 + SYNE2 chr14 64637003 + Exonic hg19 SKCM TCGA-D3-A1Q7-06A 15 2 Out-of-frame Inter-chr q11.22 q23.2 45854 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG3 STK25 chr2 242434915 - IGHG3 chr14 106237745 - Exonic hg19 SKCM TCGA-D3-A1Q7-06A 14 1 Out-of-frame Inter-chr q37.3 45855 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-SYNE2 IGL@ chr22 23055684 + SYNE2 chr14 64637004 + Exonic hg19 SKCM TCGA-D3-A1Q7-06A 12 2 Out-of-frame Inter-chr q11.22 q23.2 45856 ChimerSeq STARFusion TCGA_RNA-Seq WTAP-MAS1 WTAP chr6 160160077 + MAS1 chr6 160327952 + Exonic hg19 SKCM TCGA-D3-A1Q7-06A 3 23 CDS-5'UTR Intra-chr q25.3 q25.3 Seq+ 45857 ChimerSeq STARFusion TCGA_RNA-Seq DNAH14-ARF1 DNAH14 chr1 225117537 + ARF1 chr1 228284779 + Exonic hg19 SKCM TCGA-YD-A89C-06A 60 405 5'UTR-5'UTR Intra-chr q42.12 q42.13 Tumor suppressor gene Seq+ 45858 ChimerSeq STARFusion TCGA_RNA-Seq SLC22A23-LRRC49 SLC22A23 chr6 3410422 - LRRC49 chr15 71196891 + Exonic hg19 SKCM TCGA-YD-A89C-06A 38 124 Out-of-frame Inter-chr p25.2 q23 Seq+ 45859 ChimerSeq STARFusion TCGA_RNA-Seq NUP153-MESP1 NUP153 chr6 17706508 - MESP1 chr15 90293458 - Exonic hg19 SKCM TCGA-YD-A89C-06A 20 102 In-Frame Inter-chr p22.3 q26.1 Transcription factor Seq+ 45860 ChimerSeq STARFusion TCGA_RNA-Seq SLC22A23-LRRC49 SLC22A23 chr6 3410422 - LRRC49 chr15 71193261 + Exonic hg19 SKCM TCGA-YD-A89C-06A 13 121 In-Frame Inter-chr p25.2 q23 Seq+ 45861 ChimerSeq STARFusion TCGA_RNA-Seq OBSCN-KCNK2 OBSCN chr1 228525084 + KCNK2 chr1 215368296 + Exonic hg19 SKCM TCGA-YD-A89C-06A 14 92 Out-of-frame Intra-chr q42.13 q41 Seq+ 45862 ChimerSeq STARFusion TCGA_RNA-Seq OTUD7B-HIST2H2BF OTUD7B chr1 149949361 - HIST2H2BF chr1 149754816 - Exonic hg19 SKCM TCGA-YD-A89C-06A 17 39 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 45863 ChimerSeq STARFusion TCGA_RNA-Seq OBSCN-KCNK2 OBSCN chr1 228524827 + KCNK2 chr1 215368296 + Exonic hg19 SKCM TCGA-YD-A89C-06A 2 91 In-Frame Intra-chr q42.13 q41 Seq+ 45864 ChimerSeq STARFusion TCGA_RNA-Seq CORO2B-SLC22A23 CORO2B chr15 68871616 + SLC22A23 chr6 3416089 - Exonic hg19 SKCM TCGA-YD-A89C-06A 7 23 In-Frame Inter-chr q23 p25.2 Seq+ 45865 ChimerSeq STARFusion TCGA_RNA-Seq DNAH14-MIR3620 DNAH14 chr1 225117537 + MIR3620 chr1 228284779 + Exonic hg19 SKCM TCGA-YD-A89C-06A 4 7 5'UTR-5'UTR Intra-chr q42.12 q42.13 45866 ChimerSeq STARFusion TCGA_RNA-Seq BMS1P20-IGKJ4 BMS1P20 chr22 22677332 + IGKJ4 chr2 89160428 - Exonic hg19 SKCM TCGA-DA-A3F2-06A 15 2 Out-of-frame Inter-chr p11.2 45867 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-COL5A1 IGH@ chr14 106452669 - COL5A1 chr9 137726949 + Exonic hg19 SKCM TCGA-DA-A3F2-06A 12 10 Out-of-frame Inter-chr 32.33 q34.3 45868 ChimerSeq STARFusion TCGA_RNA-Seq SPPL2A-TENM4 SPPL2A chr15 51012137 - TENM4 chr11 78781054 - Exonic hg19 SKCM TCGA-ER-A19T-01A 84 314 Out-of-frame Inter-chr q21.2 q14.1 Seq+ 45869 ChimerSeq STARFusion TCGA_RNA-Seq SPPL2A-TENM4 SPPL2A chr15 51014321 - TENM4 chr11 78781054 - Exonic hg19 SKCM TCGA-ER-A19T-01A 31 289 Out-of-frame Inter-chr q21.2 q14.1 Seq+ 45870 ChimerSeq STARFusion TCGA_RNA-Seq GAB2-FGF7 GAB2 chr11 77961203 - FGF7 chr15 49775348 + Exonic hg19 SKCM TCGA-ER-A19T-01A 28 285 Out-of-frame Inter-chr q14.1 q21.2 Seq+ 45871 ChimerSeq STARFusion TCGA_RNA-Seq GAB2-FGF7 GAB2 chr11 77961203 - FGF7 chr15 49716229 + Exonic hg19 SKCM TCGA-ER-A19T-01A 26 266 CDS-5'UTR Inter-chr q14.1 q21.2 Seq+ 45872 ChimerSeq STARFusion TCGA_RNA-Seq GAB2-FGF7 GAB2 chr11 77961203 - FGF7 chr15 49716638 + Exonic hg19 SKCM TCGA-ER-A19T-01A 8 266 Out-of-frame Inter-chr q14.1 q21.2 Seq+ 45873 ChimerSeq STARFusion TCGA_RNA-Seq GAB2-FGF7 GAB2 chr11 77961203 - FGF7 chr15 49716542 + Exonic hg19 SKCM TCGA-ER-A19T-01A 4 266 Out-of-frame Inter-chr q14.1 q21.2 Seq+ 45874 ChimerSeq STARFusion TCGA_RNA-Seq FAM168A-PXDNL FAM168A chr11 73308968 - PXDNL chr8 52339318 - Exonic hg19 SKCM TCGA-ER-A19T-01A 15 117 5'UTR-CDS Inter-chr q13.4 q11.23 Seq+ 45875 ChimerSeq STARFusion TCGA_RNA-Seq FBL-RYR1 FBL chr19 40336931 - RYR1 chr19 39055599 + Exonic hg19 SKCM TCGA-ER-A19T-01A 24 79 Out-of-frame Intra-chr q13.2 Seq+ 45876 ChimerSeq STARFusion TCGA_RNA-Seq FAM168A-RNF121 FAM168A chr11 73308968 - RNF121 chr11 71668273 + Exonic hg19 SKCM TCGA-ER-A19T-01A 21 49 5'UTR-CDS Intra-chr q13.4 q13.4 Seq+ 45877 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-TPCN2 PVT1 chr8 128806980 + TPCN2 chr11 68825046 + Exonic hg19 SKCM TCGA-ER-A19T-01A 7 58 5'UTR-CDS Inter-chr q24.21 q13.3 Seq+ 45878 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-TPCN2 PVT1 chr8 128806980 + TPCN2 chr11 68830352 + Exonic hg19 SKCM TCGA-ER-A19T-01A 7 58 5'UTR-CDS Inter-chr q24.21 q13.3 Seq+ 45879 ChimerSeq STARFusion TCGA_RNA-Seq RNF121-PXDNL RNF121 chr11 71668310 + PXDNL chr8 52339318 - Exonic hg19 SKCM TCGA-ER-A19T-01A 14 24 Out-of-frame Inter-chr q13.4 q11.23 Seq+ 45880 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-CCDC146 PTPN12 chr7 77166962 + CCDC146 chr7 76908069 + Exonic hg19 SKCM TCGA-ER-A19T-01A 10 37 In-Frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 45881 ChimerSeq STARFusion TCGA_RNA-Seq PXDNL-USP8 PXDNL chr8 52252184 - USP8 chr15 50769473 + Exonic hg19 SKCM TCGA-ER-A19T-01A 6 53 Out-of-frame Inter-chr q11.23 q21.2 Seq+ 45882 ChimerSeq STARFusion TCGA_RNA-Seq UBAC1-SHANK2 UBAC1 chr9 138852871 - SHANK2 chr11 70935842 - Exonic hg19 SKCM TCGA-ER-A19T-01A 9 41 CDS-5'UTR Inter-chr q34.3 q13.4 Seq+ 45883 ChimerSeq STARFusion TCGA_RNA-Seq SHC2-RNF126 SHC2 chr19 460529 - RNF126 chr19 652884 - Exonic hg19 SKCM TCGA-ER-A19T-01A 9 35 In-Frame Intra-chr p13.3 p13.3 Seq+ 45884 ChimerSeq STARFusion TCGA_RNA-Seq SPPL2A-FAM168A SPPL2A chr15 51057665 - FAM168A chr11 73310005 - Exonic hg19 SKCM TCGA-ER-A19T-01A 10 31 CDS-5'UTR Inter-chr q21.2 q13.4 45885 ChimerSeq STARFusion TCGA_RNA-Seq CD55-PLD5 CD55 chr1 207512762 + PLD5 chr1 242383417 - Exonic hg19 SKCM TCGA-ER-A19T-01A 10 26 In-Frame Intra-chr q32.2 q43 Seq+ 45886 ChimerSeq STARFusion TCGA_RNA-Seq FAM168A-RNF121 FAM168A chr11 73284153 - RNF121 chr11 71668273 + Exonic hg19 SKCM TCGA-ER-A19T-01A 4 49 5'UTR-CDS Intra-chr q13.4 q13.4 Seq+ 45887 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-CCDC146 PTPN12 chr7 77193512 + CCDC146 chr7 76908069 + Exonic hg19 SKCM TCGA-ER-A19T-01A 4 37 5'UTR-CDS Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 45888 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-ATP6V1H FCHSD2 chr11 72851076 - ATP6V1H chr8 54682303 - Exonic hg19 SKCM TCGA-ER-A19T-01A 2 40 In-Frame Inter-chr q13.4 q11.23 Seq+ 45889 ChimerSeq STARFusion TCGA_RNA-Seq ZNF704-IMPA1 ZNF704 chr8 81599461 - IMPA1 chr8 82572902 - Exonic hg19 SKCM TCGA-ER-A19T-01A 3 30 Out-of-frame Intra-chr q21.13 Transcription factor q21.13 Seq+ 45890 ChimerSeq STARFusion TCGA_RNA-Seq ZNF704-IMPA1 ZNF704 chr8 81599461 - IMPA1 chr8 82583282 - Exonic hg19 SKCM TCGA-ER-A19T-01A 3 29 Out-of-frame Intra-chr q21.13 Transcription factor q21.13 Seq+ 45891 ChimerSeq STARFusion TCGA_RNA-Seq CACNA2D2-THRSP CACNA2D2 chr3 50540649 - THRSP chr11 77778705 + Exonic hg19 SKCM TCGA-ER-A19T-01A 4 12 CDS-3'UTR Inter-chr p21.31 q14.1 Seq+ 45892 ChimerSeq STARFusion TCGA_RNA-Seq SPPL2A-PXDNL SPPL2A chr15 51057665 - PXDNL chr8 52339318 - Exonic hg19 SKCM TCGA-ER-A19T-01A 2 20 Out-of-frame Inter-chr q21.2 q11.23 45893 ChimerSeq STARFusion TCGA_RNA-Seq GAB2-TENM4 GAB2 chr11 77991647 - TENM4 chr11 78525440 - Exonic hg19 SKCM TCGA-ER-A19T-01A 2 12 Out-of-frame Intra-chr q14.1 q14.1 45894 ChimerSeq STARFusion TCGA_RNA-Seq SCYL2-ANKS1B SCYL2 chr12 100661570 + ANKS1B chr12 100219167 - Exonic hg19 SKCM TCGA-ER-A19T-01A 2 12 5'UTR-CDS Intra-chr q23.1 Other:SCY1 q23.1 Seq+ 45895 ChimerSeq STARFusion TCGA_RNA-Seq B3GALTL-TEX26 B3GALTL chr13 31803431 + TEX26 chr13 31526797 + Exonic hg19 SKCM TCGA-ER-A19T-01A 2 11 Out-of-frame Intra-chr q12.3 45896 ChimerSeq STARFusion TCGA_RNA-Seq FBL-RASGRP4 FBL chr19 40336931 - RASGRP4 chr19 38900736 - Exonic hg19 SKCM TCGA-ER-A19T-01A 2 6 Out-of-frame Intra-chr q13.2 Seq+ 45897 ChimerSeq STARFusion TCGA_RNA-Seq NLGN4Y-TXLNG2P NLGN4Y chrY 16636588 + TXLNG2P chrY 21749096 + Exonic hg19 SKCM TCGA-ER-A19T-01A 2 6 5'UTR-5'UTR Intra-chr q11.221 45898 ChimerSeq STARFusion TCGA_RNA-Seq CLINT1-UCHL3 CLINT1 chr5 157285938 - UCHL3 chr13 76134889 + Exonic hg19 SKCM TCGA-Z2-A8RT-06A 9 38 Out-of-frame Inter-chr q33.3 q22.2 Seq+ 45899 ChimerSeq STARFusion TCGA_RNA-Seq GRAP2-ADSL GRAP2 chr22 40362040 + ADSL chr22 40745836 + Exonic hg19 SKCM TCGA-Z2-A8RT-06A 4 14 In-Frame Intra-chr q13.1 q13.1 Seq+ 45900 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-P2RY8 ASMTL chrY 1503915 - P2RY8 chrX 1585475 - Exonic hg19 SKCM TCGA-Z2-A8RT-06A 5 7 CDS-5'UTR Inter-chr p22.33 p22.33 Seq+ 45901 ChimerSeq STARFusion TCGA_RNA-Seq C9orf3-TBC1D9 C9orf3 chr9 97489033 + TBC1D9 chr4 141622768 - Exonic hg19 SKCM TCGA-Z2-A8RT-06A 3 10 5'UTR-CDS Inter-chr q22.32 q31.21 Seq+ 45902 ChimerSeq STARFusion TCGA_RNA-Seq APP-CCT8 APP chr21 27542882 - CCT8 chr21 30442658 - Exonic hg19 SKCM TCGA-ER-A42L-06A 18 42 In-Frame Intra-chr q21.3 q21.3 Seq+ 45903 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHG1-MTHFD1L PLEKHG1 chr6 150971922 + MTHFD1L chr6 151277131 + Exonic hg19 SKCM TCGA-ER-A42L-06A 7 15 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 45904 ChimerSeq STARFusion TCGA_RNA-Seq PDS5B-ATP8A2 PDS5B chr13 33160730 + ATP8A2 chr13 26402256 + Exonic hg19 SKCM TCGA-ER-A42L-06A 4 15 5'UTR-CDS Intra-chr q13.1 Tumor suppressor gene q12.13 Seq+ 45905 ChimerSeq STARFusion TCGA_RNA-Seq DTNB-ADCY3 DTNB chr2 25896255 - ADCY3 chr2 25057805 - Exonic hg19 SKCM TCGA-ER-A42L-06A 3 17 5'UTR-CDS Intra-chr p23.3 p23.3 Seq+ 45906 ChimerSeq STARFusion TCGA_RNA-Seq DUSP8-SCRN1 DUSP8 chr11 1593131 - SCRN1 chr7 30008684 - Exonic hg19 SKCM TCGA-EE-A2GN-06A 4 1 5'UTR-5'UTR Inter-chr p14.3 45907 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L2-DDX11L1 SIPA1L2 chr1 232596633 - DDX11L1 chr1 12010 + Exonic hg19 SKCM TCGA-EE-A29G-06A 4 11 CDS-3'UTR Intra-chr q42.2 p36.33 45908 ChimerSeq STARFusion TCGA_RNA-Seq C22orf28-FAM83F C22orf28 chr22 32802649 - FAM83F chr22 40425520 + Exonic hg19 SKCM TCGA-EB-A3Y6-01A 7 43 In-Frame Intra-chr q13.1 Seq+ 45909 ChimerSeq STARFusion TCGA_RNA-Seq ZNF507-BCL2L13 ZNF507 chr19 32851524 + BCL2L13 chr22 18209443 + Exonic hg19 SKCM TCGA-FS-A1YY-06A 14 98 Out-of-frame Inter-chr q13.11 Transcription factor q11.21 Seq+ 45910 ChimerSeq STARFusion TCGA_RNA-Seq ZNF507-BCL2L13 ZNF507 chr19 32847639 + BCL2L13 chr22 18209443 + Exonic hg19 SKCM TCGA-FS-A1YY-06A 4 98 Out-of-frame Inter-chr q13.11 Transcription factor q11.21 Seq+ 45911 ChimerSeq STARFusion TCGA_RNA-Seq ACACB-UNG ACACB chr12 109665294 + UNG chr12 109547634 + Exonic hg19 SKCM TCGA-FS-A1YY-06A 7 30 3'UTR-CDS Intra-chr q24.11 q24.11 Seq+ 45912 ChimerSeq STARFusion TCGA_RNA-Seq ACACB-UNG ACACB chr12 109661709 + UNG chr12 109547634 + Exonic hg19 SKCM TCGA-FS-A1YY-06A 2 30 3'UTR-CDS Intra-chr q24.11 q24.11 Seq+ 45913 ChimerSeq STARFusion TCGA_RNA-Seq FAM13A-ABCG2 FAM13A chr4 89744127 - ABCG2 chr4 89053787 - Exonic hg19 SKCM TCGA-D3-A8GO-06A 9 16 In-Frame Intra-chr q22.1 q22.1 Tumor suppressor gene Seq+ 45914 ChimerSeq STARFusion TCGA_RNA-Seq RSBN1L-GNAT3 RSBN1L chr7 77379381 + GNAT3 chr7 80091628 - Exonic hg19 SKCM TCGA-D3-A8GO-06A 2 2 In-Frame Intra-chr q11.23 q21.11 45915 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2B-S100A4 GATAD2B chr1 153895209 - S100A4 chr1 153517285 - Exonic hg19 SKCM TCGA-FS-A1YW-06A 10 111 5'UTR-5'UTR Intra-chr Transcription factor q21.3 Seq+ 45916 ChimerSeq STARFusion TCGA_RNA-Seq TTYH3-MAD1L1 TTYH3 chr7 2686656 + MAD1L1 chr7 1976533 - Exonic hg19 SKCM TCGA-FS-A1YW-06A 9 65 Out-of-frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 45917 ChimerSeq STARFusion TCGA_RNA-Seq TTYH3-MAD1L1 TTYH3 chr7 2686887 + MAD1L1 chr7 1976533 - Exonic hg19 SKCM TCGA-FS-A1YW-06A 4 65 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 45918 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2B-S100A3 GATAD2B chr1 153895209 - S100A3 chr1 153520966 - Exonic hg19 SKCM TCGA-FS-A1YW-06A 5 32 5'UTR-5'UTR Intra-chr Transcription factor q21.3 Seq+ 45919 ChimerSeq STARFusion TCGA_RNA-Seq CRTAC1-PMEL CRTAC1 chr10 99640006 - PMEL chr12 56349647 - Exonic hg19 SKCM TCGA-FS-A1YW-06A 2 18 In-Frame Inter-chr q24.2 q13.2 45920 ChimerSeq STARFusion TCGA_RNA-Seq POP5-ST3GAL1 POP5 chr12 121018845 - ST3GAL1 chr8 134470869 - Exonic hg19 SKCM TCGA-FS-A1YW-06A 3 1 Out-of-frame Inter-chr q24.31 q24.22 45921 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-C9orf114 IGL@ chr22 23223565 + C9orf114 chr9 131586167 - Exonic hg19 SKCM TCGA-FS-A4F8-06A 7 2 Out-of-frame Inter-chr q11.22 45922 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-TINAGL1 IGHG1 chr14 106134591 - TINAGL1 chr1 32052503 + Exonic hg19 SKCM TCGA-FS-A4F8-06A 7 1 Out-of-frame Inter-chr q32.33 p35.2 45923 ChimerSeq STARFusion TCGA_RNA-Seq SCAPER-TSPAN3 SCAPER chr15 77134075 - TSPAN3 chr15 77348597 - Exonic hg19 SKCM TCGA-EE-A29D-06A 42 101 In-Frame Intra-chr q24.3 q24.3 Seq+ 45924 ChimerSeq STARFusion TCGA_RNA-Seq SENP3-FXR2 SENP3 chr17 7470322 + FXR2 chr17 7499312 - Exonic hg19 SKCM TCGA-EE-A29D-06A 44 83 In-Frame Intra-chr p13.1 p13.1 Seq+ 45925 ChimerSeq STARFusion TCGA_RNA-Seq DENND4A-MEGF11 DENND4A chr15 66007816 - MEGF11 chr15 66191272 - Exonic hg19 SKCM TCGA-EE-A29D-06A 11 47 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 45926 ChimerSeq STARFusion TCGA_RNA-Seq FANCD2-ARPC4 FANCD2 chr3 10070405 + ARPC4 chr3 9841869 + Exonic hg19 SKCM TCGA-EE-A29D-06A 8 18 Out-of-frame Intra-chr p25.3 Oncogene p25.3 Seq+ 45927 ChimerSeq STARFusion TCGA_RNA-Seq MARK1-RHOU MARK1 chr1 220826694 + RHOU chr1 228873420 + Exonic hg19 SKCM TCGA-EE-A29D-06A 4 30 Out-of-frame Intra-chr q41 CAMK:CAMKL Oncogene q42.13 Seq+ 45928 ChimerSeq STARFusion TCGA_RNA-Seq MARK1-RHOU MARK1 chr1 220831176 + RHOU chr1 228873420 + Exonic hg19 SKCM TCGA-EE-A29D-06A 2 30 Out-of-frame Intra-chr q41 CAMK:CAMKL Oncogene q42.13 Seq+ 45929 ChimerSeq STARFusion TCGA_RNA-Seq MARK1-RHOU MARK1 chr1 220826694 + RHOU chr1 228879032 + Exonic hg19 SKCM TCGA-EE-A29D-06A 2 30 Out-of-frame Intra-chr q41 CAMK:CAMKL Oncogene q42.13 Seq+ 45930 ChimerSeq STARFusion TCGA_RNA-Seq DYNC1H1-PPP2R5C DYNC1H1 chr14 102458010 + PPP2R5C chr14 102323023 + Exonic hg19 SKCM TCGA-EE-A29D-06A 3 21 Out-of-frame Intra-chr q32.31 q32.31 Tumor suppressor gene Seq+ 45931 ChimerSeq STARFusion TCGA_RNA-Seq STIM1-PGAP2 STIM1 chr11 3877639 + PGAP2 chr11 3829524 + Exonic hg19 SKCM TCGA-EE-A29D-06A 3 10 In-Frame Intra-chr p15.4 p15.4 Seq+ 45932 ChimerSeq STARFusion TCGA_RNA-Seq MACROD2-SPTLC3 MACROD2 chr20 14066374 + SPTLC3 chr20 13090759 + Exonic hg19 SKCM TCGA-EE-A29D-06A 2 5 In-Frame Intra-chr p12.1 p12.1 Seq+ 45933 ChimerSeq STARFusion TCGA_RNA-Seq PMEL-TBC1D7 PMEL chr12 56359720 - TBC1D7 chr6 13321327 - Exonic hg19 SKCM TCGA-EE-A29D-06A 2 4 In-Frame Inter-chr q13.2 p24.1 45934 ChimerSeq STARFusion TCGA_RNA-Seq ATP1A1-PEX19 ATP1A1 chr1 116930113 + PEX19 chr1 160251990 - Exonic hg19 SKCM TCGA-EE-A29D-06A 2 1 In-Frame Intra-chr p13.1 q23.2 45935 ChimerSeq STARFusion TCGA_RNA-Seq FLJ39739-HSD3B2 FLJ39739 chr1 147931724 - HSD3B2 chr1 119957954 + Exonic hg19 SKCM TCGA-ER-A3PL-06A 2 3 3'UTR-5'UTR Intra-chr p12 45936 ChimerSeq STARFusion TCGA_RNA-Seq USP18-YWHAH USP18 chr22 18632987 + YWHAH chr22 32352124 + Exonic hg19 SKCM TCGA-D3-A5GN-06A 6 9 Out-of-frame Intra-chr q11.21 q12.3 Seq+ 45937 ChimerSeq STARFusion TCGA_RNA-Seq PTBP3-SVEP1 PTBP3 chr9 115095750 - SVEP1 chr9 113141797 - Exonic hg19 SKCM TCGA-EB-A82C-01A 41 237 Out-of-frame Intra-chr q32 q31.3 Seq+ 45938 ChimerSeq STARFusion TCGA_RNA-Seq FBXL17-TMEM232 FBXL17 chr5 107521818 - TMEM232 chr5 109941988 - Exonic hg19 SKCM TCGA-EB-A82C-01A 15 95 In-Frame Intra-chr q21.3 q22.1 Seq+ 45939 ChimerSeq STARFusion TCGA_RNA-Seq USP47-RRAS2 USP47 chr11 11863771 + RRAS2 chr11 14317401 - Exonic hg19 SKCM TCGA-EB-A82C-01A 20 72 In-Frame Intra-chr p15.3 p15.2 Seq+ 45940 ChimerSeq STARFusion TCGA_RNA-Seq FBXL17-TMEM232 FBXL17 chr5 107521818 - TMEM232 chr5 109954263 - Exonic hg19 SKCM TCGA-EB-A82C-01A 2 92 Out-of-frame Intra-chr q21.3 q22.1 Seq+ 45941 ChimerSeq STARFusion TCGA_RNA-Seq ABI1-CUBN ABI1 chr10 27149676 - CUBN chr10 17032514 - Exonic hg19 SKCM TCGA-EB-A82C-01A 4 58 CDS-5'UTR Intra-chr p12.1 p13 Seq+ 45942 ChimerSeq STARFusion TCGA_RNA-Seq C1orf159-ATAD3C C1orf159 chr1 1051440 - ATAD3C chr1 1386061 + Exonic hg19 SKCM TCGA-EB-A82C-01A 18 2 5'UTR-5'UTR Intra-chr p36.33 p36.33 Seq+ 45943 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-HS2ST1 PUM1 chr1 31532051 - HS2ST1 chr1 87538617 + Exonic hg19 SKCM TCGA-EB-A82C-01A 4 25 Out-of-frame Intra-chr p35.2 p22.3 Seq+ 45944 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-HS2ST1 PUM1 chr1 31532146 - HS2ST1 chr1 87538617 + Exonic hg19 SKCM TCGA-EB-A82C-01A 2 25 Out-of-frame Intra-chr p35.2 p22.3 Seq+ 45945 ChimerSeq STARFusion TCGA_RNA-Seq EPS15-C1orf159 EPS15 chr1 51929345 - C1orf159 chr1 1027483 - Exonic hg19 SKCM TCGA-EB-A82C-01A 3 19 CDS-5'UTR Intra-chr p32.3 p36.33 Seq+ 45946 ChimerSeq STARFusion TCGA_RNA-Seq SMIM1-DLGAP3 SMIM1 chr1 3689745 + DLGAP3 chr1 35365874 - Exonic hg19 SKCM TCGA-EB-A82C-01A 3 16 Out-of-frame Intra-chr p36.32 p34.3 Seq+ 45947 ChimerSeq STARFusion TCGA_RNA-Seq C1orf213-PTCH2 C1orf213 chr1 23696012 + PTCH2 chr1 45292575 - Exonic hg19 SKCM TCGA-EB-A82C-01A 5 7 Out-of-frame Intra-chr p34.1 Tumor suppressor gene Seq+ 45948 ChimerSeq STARFusion TCGA_RNA-Seq FER-FBXL17 FER chr5 108233549 + FBXL17 chr5 107197561 - Exonic hg19 SKCM TCGA-EB-A82C-01A 2 15 In-Frame Intra-chr q21.3 TK:Fer q21.3 Seq+ 45949 ChimerSeq STARFusion TCGA_RNA-Seq RAD1-SPEF2 RAD1 chr5 34914800 - SPEF2 chr5 35691139 + Exonic hg19 SKCM TCGA-EB-A82C-01A 3 9 In-Frame Intra-chr p13.2 p13.2 Seq+ 45950 ChimerSeq STARFusion TCGA_RNA-Seq NFIA-AGBL4 NFIA chr1 61849037 + AGBL4 chr1 49332902 - Exonic hg19 SKCM TCGA-EB-A82C-01A 4 3 Out-of-frame Intra-chr p31.3 Transcription factor p33 Seq+ 45951 ChimerSeq STARFusion TCGA_RNA-Seq INADL-KIAA0319L INADL chr1 62208227 + KIAA0319L chr1 35944813 - Exonic hg19 SKCM TCGA-EB-A82C-01A 2 9 5'UTR-CDS Intra-chr p34.3 45952 ChimerSeq STARFusion TCGA_RNA-Seq DDX17-POLR3H DDX17 chr22 38894091 - POLR3H chr22 41936432 - Exonic hg19 SKCM TCGA-XV-AAZY-01A 596 1572 Out-of-frame Intra-chr q13.1 q13.2 Seq+ 45953 ChimerSeq STARFusion TCGA_RNA-Seq XRCC6-ARSB XRCC6 chr22 42024234 + ARSB chr5 78265015 - Exonic hg19 SKCM TCGA-XV-AAZY-01A 61 111 In-Frame Inter-chr q13.2 q14.1 Seq+ 45954 ChimerSeq STARFusion TCGA_RNA-Seq RAI1-SIMC1 RAI1 chr17 17627473 + SIMC1 chr5 175763723 + Exonic hg19 SKCM TCGA-XV-AAZY-01A 35 117 Out-of-frame Inter-chr p11.2 q35.2 Seq+ 45955 ChimerSeq STARFusion TCGA_RNA-Seq KCNAB2-TCERG1L KCNAB2 chr1 6160697 + TCERG1L chr10 132915194 - Exonic hg19 SKCM TCGA-XV-AAZY-01A 30 0 Out-of-frame Inter-chr p36.31 q26.3 45956 ChimerSeq STARFusion TCGA_RNA-Seq FCHO2-SLC25A17 FCHO2 chr5 72251956 + SLC25A17 chr22 41175129 - Exonic hg19 SKCM TCGA-XV-AAZY-01A 9 23 Out-of-frame Inter-chr q13.2 q13.2 Seq+ 45957 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7B-MICALL1 ZC3H7B chr22 41723368 + MICALL1 chr22 38307959 + Exonic hg19 SKCM TCGA-XV-AAZY-01A 2 7 Out-of-frame Intra-chr q13.2 q13.1 Seq+ 45958 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010681 - TTC18 chr10 75016173 - Exonic hg19 SKCM TCGA-D3-A2JN-06A 84 529 Out-of-frame Intra-chr q22.2 45959 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010573 - TTC18 chr10 75016174 - Exonic hg19 SKCM TCGA-D3-A2JN-06A 60 529 3'UTR-CDS Intra-chr q22.2 45960 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010596 - TTC18 chr10 75016174 - Exonic hg19 SKCM TCGA-D3-A2JN-06A 23 529 3'UTR-CDS Intra-chr q22.2 45961 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75011521 - TTC18 chr10 75016174 - Exonic hg19 SKCM TCGA-D3-A2JN-06A 19 529 Out-of-frame Intra-chr q22.2 45962 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF5-STEAP1B RAPGEF5 chr7 22270465 - STEAP1B chr7 22459455 - Exonic hg19 SKCM TCGA-D3-A2JN-06A 19 56 In-Frame Intra-chr p15.3 p15.3 Seq+ 45963 ChimerSeq STARFusion TCGA_RNA-Seq TNFRSF1A-CHD4 TNFRSF1A chr12 6450942 - CHD4 chr12 6682435 - Exonic hg19 SKCM TCGA-D3-A2JN-06A 3 8 In-Frame Intra-chr p13.31 p13.31 Seq+ 45964 ChimerSeq STARFusion TCGA_RNA-Seq RANGAP1-CENPM RANGAP1 chr22 41660668 - CENPM chr22 42342500 - Exonic hg19 SKCM TCGA-D3-A2JN-06A 3 0 In-Frame Intra-chr q13.2 q13.2 45965 ChimerSeq STARFusion TCGA_RNA-Seq SAFB2-AP2A1 SAFB2 chr19 5598804 - AP2A1 chr19 50295192 + Exonic hg19 SKCM TCGA-D3-A2JN-06A 2 2 Out-of-frame Intra-chr p13.3 Tumor suppressor gene Transcription factor q13.33 Seq+ 45966 ChimerSeq STARFusion TCGA_RNA-Seq NUPL1-KL NUPL1 chr13 25876018 + KL chr13 33627904 + Exonic hg19 SKCM TCGA-EE-A29C-06A 5 15 Out-of-frame Intra-chr q13.1 Tumor suppressor gene Seq+ 45967 ChimerSeq STARFusion TCGA_RNA-Seq CDK12-SPATA31A2 CDK12 chr17 37619370 + SPATA31A2 chr9 39886380 + Exonic hg19 SKCM TCGA-EE-A29C-06A 5 14 Out-of-frame Inter-chr q12 Oncogene 45968 ChimerSeq STARFusion TCGA_RNA-Seq DDR2-FMO4 DDR2 chr1 162625164 + FMO4 chr1 171293277 + Exonic hg19 SKCM TCGA-EB-A430-01A 9 91 5'UTR-CDS Intra-chr q23.3 TK:DDR Oncogene Tumor suppressor gene q24.3 Seq+ 45969 ChimerSeq STARFusion TCGA_RNA-Seq DDR2-FMO4 DDR2 chr1 162625164 + FMO4 chr1 171288957 + Exonic hg19 SKCM TCGA-EB-A430-01A 6 91 5'UTR-5'UTR Intra-chr q23.3 TK:DDR Oncogene Tumor suppressor gene q24.3 Seq+ 45970 ChimerSeq STARFusion TCGA_RNA-Seq DDR2-FMO4 DDR2 chr1 162625164 + FMO4 chr1 171292143 + Exonic hg19 SKCM TCGA-EB-A430-01A 2 91 5'UTR-CDS Intra-chr q23.3 TK:DDR Oncogene Tumor suppressor gene q24.3 Seq+ 45971 ChimerSeq STARFusion TCGA_RNA-Seq JAZF1-TAX1BP1 JAZF1 chr7 27880317 - TAX1BP1 chr7 27867357 + Exonic hg19 SKCM TCGA-EB-A430-01A 2 4 In-Frame Intra-chr p15.1 Transcription factor p15.2 Seq+ 45972 ChimerSeq STARFusion TCGA_RNA-Seq CFL1-LRRC41 CFL1 chr11 65625568 - LRRC41 chr1 46752171 - Exonic hg19 SKCM TCGA-EE-A3JB-06A 39 107 In-Frame Inter-chr q13.1 p33 Seq+ 45973 ChimerSeq STARFusion TCGA_RNA-Seq COL16A1-TSGA10IP COL16A1 chr1 32127935 - TSGA10IP chr11 65714351 + Exonic hg19 SKCM TCGA-EE-A3JB-06A 7 58 In-Frame Inter-chr p35.2 q13.1 Seq+ 45974 ChimerSeq STARFusion TCGA_RNA-Seq COL16A1-TSGA10IP COL16A1 chr1 32127935 - TSGA10IP chr11 65714581 + Exonic hg19 SKCM TCGA-EE-A3JB-06A 2 55 Out-of-frame Inter-chr p35.2 q13.1 Seq+ 45975 ChimerSeq STARFusion TCGA_RNA-Seq MBNL1-CPHL1P MBNL1 chr3 151986881 + CPHL1P chr3 148965283 - Exonic hg19 SKCM TCGA-EE-A3JB-06A 5 18 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 45976 ChimerSeq STARFusion TCGA_RNA-Seq ACACB-UNG ACACB chr12 109665294 + UNG chr12 109547634 + Exonic hg19 SKCM TCGA-EB-A44O-01A 30 83 3'UTR-CDS Intra-chr q24.11 q24.11 Seq+ 45977 ChimerSeq STARFusion TCGA_RNA-Seq ACACB-UNG ACACB chr12 109661709 + UNG chr12 109547634 + Exonic hg19 SKCM TCGA-EB-A44O-01A 4 82 3'UTR-CDS Intra-chr q24.11 q24.11 Seq+ 45978 ChimerSeq STARFusion TCGA_RNA-Seq MLLT1-ZNF439 MLLT1 chr19 6262239 - ZNF439 chr19 11941089 + Exonic hg19 SKCM TCGA-EB-A44O-01A 3 14 CDS-5'UTR Intra-chr p13.3 p13.2 Transcription factor Seq+ 45979 ChimerSeq STARFusion TCGA_RNA-Seq KDM4B-SLC25A42 KDM4B chr19 5138081 + SLC25A42 chr19 19206900 + Exonic hg19 SKCM TCGA-EB-A44O-01A 2 9 CDS-5'UTR Intra-chr p13.3 p13.11 Seq+ 45980 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010683 - TTC18 chr10 75016175 - Exonic hg19 SKCM TCGA-GN-A26A-06A 20 196 Out-of-frame Intra-chr q22.2 45981 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010573 - TTC18 chr10 75016174 - Exonic hg19 SKCM TCGA-GN-A26A-06A 7 185 3'UTR-CDS Intra-chr q22.2 45982 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010596 - TTC18 chr10 75016174 - Exonic hg19 SKCM TCGA-GN-A26A-06A 7 185 3'UTR-CDS Intra-chr q22.2 45983 ChimerSeq STARFusion TCGA_RNA-Seq MEF2A-WDR61 MEF2A chr15 100106309 + WDR61 chr15 78588067 - Exonic hg19 SKCM TCGA-GN-A26A-06A 6 34 5'UTR-5'UTR Intra-chr q26.3 Transcription factor q25.1 Seq+ 45984 ChimerSeq STARFusion TCGA_RNA-Seq POGZ-HHIPL2 POGZ chr1 151381170 - HHIPL2 chr1 222712116 - Exonic hg19 SKCM TCGA-GN-A26A-06A 7 19 Out-of-frame Intra-chr q21.3 q41 Seq+ 45985 ChimerSeq STARFusion TCGA_RNA-Seq RPRD2-PRPF3 RPRD2 chr1 150337395 + PRPF3 chr1 150297353 + Exonic hg19 SKCM TCGA-GN-A26A-06A 5 13 CDS-5'UTR Intra-chr q21.2 q21.2 45986 ChimerSeq STARFusion TCGA_RNA-Seq HEXA-MYO9A HEXA chr15 72668061 - MYO9A chr15 72208833 - Exonic hg19 SKCM TCGA-GN-A26A-06A 2 10 Out-of-frame Intra-chr q23 q23 Seq+ 45987 ChimerSeq STARFusion TCGA_RNA-Seq OTUD5-TEX101 OTUD5 chrX 48783123 - TEX101 chr19 43906918 + Exonic hg19 SKCM TCGA-ER-A199-06A 2 0 CDS-5'UTR Inter-chr p11.23 q13.31 45988 ChimerSeq STARFusion TCGA_RNA-Seq NPL-LINC01037 NPL chr1 182781348 + LINC01037 chr1 187439203 + Exonic hg19 SKCM TCGA-EE-A185-06A 3 11 Out-of-frame Intra-chr q25.3 q31.1 45989 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-HABP4 IGH@ chr14 106518399 - HABP4 chr9 99227675 + Exonic hg19 SKCM TCGA-3N-A9WC-06A 24 0 Out-of-frame Inter-chr 32.33 q22.32 45990 ChimerSeq STARFusion TCGA_RNA-Seq AIF1L-NRSN2 AIF1L chr9 133972250 + NRSN2 chr20 329893 + Exonic hg19 SKCM TCGA-3N-A9WC-06A 14 30 5'UTR-5'UTR Inter-chr q34.12 p13 Tumor suppressor gene Seq+ 45991 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-HABP4 IGH@ chr14 106691672 - HABP4 chr9 99227675 + Exonic hg19 SKCM TCGA-3N-A9WC-06A 20 0 Out-of-frame Inter-chr 32.33 q22.32 45992 ChimerSeq STARFusion TCGA_RNA-Seq DESI2-PGBD5 DESI2 chr1 244816657 + PGBD5 chr1 230493067 - Exonic hg19 SKCM TCGA-3N-A9WC-06A 12 17 Out-of-frame Intra-chr q44 q42.13 Seq+ 45993 ChimerSeq STARFusion TCGA_RNA-Seq FOXK2-MS4A12 FOXK2 chr17 80521424 + MS4A12 chr11 60264786 + Exonic hg19 SKCM TCGA-3N-A9WC-06A 11 18 CDS-5'UTR Inter-chr q25.3 Transcription factor q12.2 Seq+ 45994 ChimerSeq STARFusion TCGA_RNA-Seq STK32A-PDXDC2P STK32A chr5 146741177 + PDXDC2P chr16 70058573 - Exonic hg19 SKCM TCGA-3N-A9WC-06A 3 11 CDS-3'UTR Inter-chr q32 q22.1 45995 ChimerSeq STARFusion TCGA_RNA-Seq STK32A-PDXDC2P STK32A chr5 146741177 + PDXDC2P chr16 70058573 - Exonic hg19 SKCM TCGA-3N-A9WC-06A 2 6 CDS-3'UTR Inter-chr q32 q22.1 45996 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-NADSYN1 PPFIA1 chr11 70208594 + NADSYN1 chr11 71208529 + Exonic hg19 SKCM TCGA-BF-A9VF-01A 76 139 In-Frame Intra-chr q13.3 q13.4 Seq+ 45997 ChimerSeq STARFusion TCGA_RNA-Seq CCDC50-OSTN CCDC50 chr3 191078948 + OSTN chr3 190980655 + Exonic hg19 SKCM TCGA-FR-A7U8-06A 144 328 CDS-3'UTR Intra-chr q28 q28 Seq+ 45998 ChimerSeq STARFusion TCGA_RNA-Seq ENAH-LIN9 ENAH chr1 225840388 - LIN9 chr1 226438620 - Exonic hg19 SKCM TCGA-FR-A7U8-06A 7 27 Out-of-frame Intra-chr q42.12 q42.12 Tumor suppressor gene Seq+ 45999 ChimerSeq STARFusion TCGA_RNA-Seq ZNF207-LRRC37B ZNF207 chr17 30697099 + LRRC37B chr17 30376119 + Exonic hg19 SKCM TCGA-FR-A7U8-06A 6 29 Out-of-frame Intra-chr q11.2 Transcription factor q11.2 Seq+ 46000 ChimerSeq STARFusion TCGA_RNA-Seq INTS4-ALG8 INTS4 chr11 77649697 - ALG8 chr11 77820627 - Exonic hg19 SKCM TCGA-FR-A7U8-06A 3 38 In-Frame Intra-chr q14.1 q14.1 Seq+ 46001 ChimerSeq STARFusion TCGA_RNA-Seq ZNF207-LRRC37B ZNF207 chr17 30696801 + LRRC37B chr17 30376121 + Exonic hg19 SKCM TCGA-FR-A7U8-06A 5 20 3'UTR-CDS Intra-chr q11.2 Transcription factor q11.2 Seq+ 46002 ChimerSeq STARFusion TCGA_RNA-Seq ZNF207-LRRC37B ZNF207 chr17 30696764 + LRRC37B chr17 30376121 + Exonic hg19 SKCM TCGA-FR-A7U8-06A 4 20 Out-of-frame Intra-chr q11.2 Transcription factor q11.2 Seq+ 46003 ChimerSeq STARFusion TCGA_RNA-Seq WDHD1-DLGAP5 WDHD1 chr14 55467221 - DLGAP5 chr14 55621524 - Exonic hg19 SKCM TCGA-FR-A7U8-06A 3 8 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 46004 ChimerSeq STARFusion TCGA_RNA-Seq AVIL-TRHDE AVIL chr12 58201977 - TRHDE chr12 72680461 + Exonic hg19 SKCM TCGA-ER-A2NE-06A 24 54 Out-of-frame Intra-chr q14.1 q21.1 Seq+ 46005 ChimerSeq STARFusion TCGA_RNA-Seq TSFM-AVIL TSFM chr12 58180945 + AVIL chr12 58208009 - Exonic hg19 SKCM TCGA-ER-A2NE-06A 18 35 In-Frame Intra-chr q14.1 q14.1 46006 ChimerSeq STARFusion TCGA_RNA-Seq MED31-FBXW10 MED31 chr17 6553676 - FBXW10 chr17 18651254 + Exonic hg19 SKCM TCGA-ER-A2NE-06A 7 23 In-Frame Intra-chr p13.1 p11.2 Seq+ 46007 ChimerSeq STARFusion TCGA_RNA-Seq TXNDC17-YBX2 TXNDC17 chr17 6544547 + YBX2 chr17 7193854 - Exonic hg19 SKCM TCGA-ER-A2NE-06A 4 30 Out-of-frame Intra-chr p13.1 p13.1 Transcription factor Seq+ 46008 ChimerSeq STARFusion TCGA_RNA-Seq TXNDC17-YBX2 TXNDC17 chr17 6544547 + YBX2 chr17 7196857 - Exonic hg19 SKCM TCGA-ER-A2NE-06A 2 30 In-Frame Intra-chr p13.1 p13.1 Transcription factor Seq+ 46009 ChimerSeq STARFusion TCGA_RNA-Seq MED31-FBXW10 MED31 chr17 6553302 - FBXW10 chr17 18651254 + Exonic hg19 SKCM TCGA-ER-A2NE-06A 2 23 Out-of-frame Intra-chr p13.1 p11.2 Seq+ 46010 ChimerSeq STARFusion TCGA_RNA-Seq MED31-CDRT1 MED31 chr17 6553676 - CDRT1 chr17 15519123 - Exonic hg19 SKCM TCGA-ER-A2NE-06A 5 2 In-Frame Intra-chr p13.1 p12 46011 ChimerSeq STARFusion TCGA_RNA-Seq HOXB6-EPHA5 HOXB6 chr17 46681842 - EPHA5 chr4 66509145 - Exonic hg19 SKCM TCGA-ER-A2NE-06A 2 7 5'UTR-CDS Inter-chr q21.32 Transcription factor q13.2 Oncogene Seq+ 46012 ChimerSeq STARFusion TCGA_RNA-Seq CNOT2-CPSF6 CNOT2 chr12 70704797 + CPSF6 chr12 69651512 + Exonic hg19 SKCM TCGA-ER-A2NE-06A 2 1 Out-of-frame Intra-chr q15 q15 46013 ChimerSeq STARFusion TCGA_RNA-Seq DNMBP-CPN1 DNMBP chr10 101714971 - CPN1 chr10 101816909 - Exonic hg19 SKCM TCGA-W3-AA1W-06A 2 17 In-Frame Intra-chr q24.2 q24.2 Seq+ 46014 ChimerSeq STARFusion TCGA_RNA-Seq ZNF544-GRIN2D ZNF544 chr19 58741828 + GRIN2D chr19 48907991 + Exonic hg19 SKCM TCGA-D3-A2JE-06A 7 24 5'UTR-CDS Intra-chr q13.43 Transcription factor q13.33 Seq+ 46015 ChimerSeq STARFusion TCGA_RNA-Seq ZNF544-GRIN2D ZNF544 chr19 58741828 + GRIN2D chr19 48917248 + Exonic hg19 SKCM TCGA-D3-A2JE-06A 2 24 5'UTR-CDS Intra-chr q13.43 Transcription factor q13.33 Seq+ 46016 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0146-UBE2V2 KIAA0146 chr8 48626203 + UBE2V2 chr8 48955593 + Exonic hg19 SKCM TCGA-D3-A2JE-06A 2 20 In-Frame Intra-chr q11.21 Seq+ 46017 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 SKCM TCGA-D3-A2JE-06A 5 1 In-Frame Intra-chr p11.21 p11.21 46018 ChimerSeq STARFusion TCGA_RNA-Seq GTPBP3-RBM42 GTPBP3 chr19 17450408 + RBM42 chr19 36122042 + Exonic hg19 SKCM TCGA-D3-A2JE-06A 2 4 Out-of-frame Intra-chr p13.11 q13.12 Seq+ 46019 ChimerSeq STARFusion TCGA_RNA-Seq WDR70-CT49 WDR70 chr5 37697856 + CT49 chr5 12759471 + Exonic hg19 SKCM TCGA-EB-A42Y-01A 9 34 Out-of-frame Intra-chr p13.2 46020 ChimerSeq STARFusion TCGA_RNA-Seq BRD9-OSMR BRD9 chr5 889136 - OSMR chr5 38903984 + Exonic hg19 SKCM TCGA-EB-A42Y-01A 2 12 Out-of-frame Intra-chr p15.33 p13.1 Seq+ 46021 ChimerSeq STARFusion TCGA_RNA-Seq BAIAP2-RPTOR BAIAP2 chr17 79060380 + RPTOR chr17 78914296 + Exonic hg19 SKCM TCGA-FS-A1ZQ-06A 28 71 In-Frame Intra-chr q25.3 q25.3 Seq+ 46022 ChimerSeq STARFusion TCGA_RNA-Seq OCA2-HERC2 OCA2 chr15 28326794 - HERC2 chr15 28370339 - Exonic hg19 SKCM TCGA-FS-A1ZQ-06A 4 23 Out-of-frame Intra-chr q13.1 Seq+ 46023 ChimerSeq STARFusion TCGA_RNA-Seq GPR180-GPC6 GPR180 chr13 95257803 + GPC6 chr13 95034668 + Exonic hg19 SKCM TCGA-FS-A1ZQ-06A 4 17 Out-of-frame Intra-chr q32.1 q31.3 Seq+ 46024 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA6-NUCKS1 PLEKHA6 chr1 204336927 - NUCKS1 chr1 205698749 - Exonic hg19 SKCM TCGA-FS-A1ZQ-06A 3 20 5'UTR-CDS Intra-chr q32.1 q32.1 Seq+ 46025 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC7-USP10 ZDHHC7 chr16 85011530 - USP10 chr16 84792322 + Exonic hg19 SKCM TCGA-EB-A4XL-01A 9 51 In-Frame Intra-chr q24.1 q24.1 Seq+ 46026 ChimerSeq STARFusion TCGA_RNA-Seq SOX5-RASA4 SOX5 chr12 24048832 - RASA4 chr7 102251589 - Exonic hg19 SKCM TCGA-EB-A4XL-01A 7 35 Out-of-frame Inter-chr p12.1 Transcription factor q22.1 Seq+ 46027 ChimerSeq STARFusion TCGA_RNA-Seq PRKCA-PITPNC1 PRKCA chr17 64302245 + PITPNC1 chr17 65665624 + Exonic hg19 SKCM TCGA-EB-A4XL-01A 9 26 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 46028 ChimerSeq STARFusion TCGA_RNA-Seq CRISPLD2-MPZL2 CRISPLD2 chr16 84922969 + MPZL2 chr11 118125948 - Exonic hg19 SKCM TCGA-EB-A4XL-01A 2 20 CDS-3'UTR Inter-chr q24.1 q23.3 Seq+ 46029 ChimerSeq STARFusion TCGA_RNA-Seq EPB41-ITPR1 EPB41 chr1 29435949 + ITPR1 chr3 4774772 + Exonic hg19 SKCM TCGA-EB-A4XL-01A 3 9 In-Frame Inter-chr p35.3 Tumor suppressor gene p26.1 Seq+ 46030 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L1-SLC39A11 NFE2L1 chr17 46134864 + SLC39A11 chr17 70944014 - Exonic hg19 SKCM TCGA-EB-A4XL-01A 3 8 In-Frame Intra-chr q21.32 Transcription factor q25.1 Seq+ 46031 ChimerSeq STARFusion TCGA_RNA-Seq GALNT18-PRDM2 GALNT18 chr11 11642906 - PRDM2 chr1 14142922 + Exonic hg19 SKCM TCGA-EB-A4OY-01A 17 90 Out-of-frame Inter-chr p15.4 p36.21 Tumor suppressor gene Transcription factor Seq+ 46032 ChimerSeq STARFusion TCGA_RNA-Seq LONRF1-PSMB7 LONRF1 chr8 12612209 - PSMB7 chr9 127146935 - Exonic hg19 SKCM TCGA-EB-A4OY-01A 6 32 In-Frame Inter-chr p23.1 q33.3 Seq+ 46033 ChimerSeq STARFusion TCGA_RNA-Seq LONRF1-PSMB7 LONRF1 chr8 12612209 - PSMB7 chr9 127167711 - Exonic hg19 SKCM TCGA-EB-A4OY-01A 2 32 Out-of-frame Inter-chr p23.1 q33.3 Seq+ 46034 ChimerSeq STARFusion TCGA_RNA-Seq SNN-BCAR4 SNN chr16 11762396 + BCAR4 chr16 11914154 - Exonic hg19 SKCM TCGA-EB-A4OY-01A 5 7 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 46035 ChimerSeq STARFusion TCGA_RNA-Seq ST3GAL4-FAT3 ST3GAL4 chr11 126225737 + FAT3 chr11 92564788 + Exonic hg19 SKCM TCGA-EB-A4OY-01A 5 1 5'UTR-CDS Intra-chr q24.2 Seq+ 46036 ChimerSeq STARFusion TCGA_RNA-Seq GPATCH3-NUDC GPATCH3 chr1 27223792 - NUDC chr1 27250580 + Exonic hg19 SKCM TCGA-EB-A4OY-01A 3 3 In-Frame Intra-chr p36.11 p36.11 46037 ChimerSeq STARFusion TCGA_RNA-Seq SNN-BCAR4 SNN chr16 11762396 + BCAR4 chr16 11915612 - Exonic hg19 SKCM TCGA-EB-A4OY-01A 2 7 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 46038 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-HSD17B14 RCC1 chr1 28834672 + HSD17B14 chr19 49318398 - Exonic hg19 SKCM TCGA-EB-A4OY-01A 2 2 5'UTR-CDS Inter-chr p35.3 q13.33 46039 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-HSD17B14 SNHG3 chr1 28834672 + HSD17B14 chr19 49318398 - Exonic hg19 SKCM TCGA-EB-A4OY-01A 2 2 5'UTR-CDS Inter-chr p35.3 q13.33 46040 ChimerSeq STARFusion TCGA_RNA-Seq GPATCH11-DYM GPATCH11 chr2 37315583 + DYM chr18 46690157 - Exonic hg19 SKCM TCGA-ER-A19E-06A 14 96 Out-of-frame Inter-chr p22.2 q21.1 Seq+ 46041 ChimerSeq STARFusion TCGA_RNA-Seq XRCC2-WASL XRCC2 chr7 152373126 - WASL chr7 123332432 - Exonic hg19 SKCM TCGA-ER-A19E-06A 8 76 Out-of-frame Intra-chr q36.1 Oncogene q31.32 Seq+ 46042 ChimerSeq STARFusion TCGA_RNA-Seq GPATCH11-DYM GPATCH11 chr2 37311713 + DYM chr18 46690157 - Exonic hg19 SKCM TCGA-ER-A19E-06A 2 96 Out-of-frame Inter-chr p22.2 q21.1 Seq+ 46043 ChimerSeq STARFusion TCGA_RNA-Seq XRCC2-WASL XRCC2 chr7 152373126 - WASL chr7 123332444 - Exonic hg19 SKCM TCGA-ER-A19E-06A 3 76 Out-of-frame Intra-chr q36.1 Oncogene q31.32 Seq+ 46044 ChimerSeq STARFusion TCGA_RNA-Seq MVB12B-MAMDC2 MVB12B chr9 129184227 + MAMDC2 chr9 72833253 + Exonic hg19 SKCM TCGA-ER-A19E-06A 10 37 Out-of-frame Intra-chr q33.3 q21.12 Seq+ 46045 ChimerSeq STARFusion TCGA_RNA-Seq DNM1L-BICD1 DNM1L chr12 32832399 + BICD1 chr12 32487450 + Exonic hg19 SKCM TCGA-ER-A19E-06A 9 18 In-Frame Intra-chr p11.21 p11.21 Seq+ 46046 ChimerSeq STARFusion TCGA_RNA-Seq EXOC7-RNF157 EXOC7 chr17 74082405 - RNF157 chr17 74154545 - Exonic hg19 SKCM TCGA-ER-A19E-06A 4 12 Out-of-frame Intra-chr q25.1 q25.1 46047 ChimerSeq STARFusion TCGA_RNA-Seq EEF2-NRXN2 EEF2 chr19 3979830 - NRXN2 chr11 64416337 - Exonic hg19 SKCM TCGA-ER-A19E-06A 4 1 Out-of-frame Inter-chr p13.3 q13.1 46048 ChimerSeq STARFusion TCGA_RNA-Seq EXOC4-PTPRN2 EXOC4 chr7 133692588 + PTPRN2 chr7 158282477 - Exonic hg19 SKCM TCGA-ER-A19E-06A 2 4 Out-of-frame Intra-chr q33 q36.3 Seq+ 46049 ChimerSeq STARFusion TCGA_RNA-Seq SMC2-AKNA SMC2 chr9 106874095 + AKNA chr9 117126899 - Exonic hg19 SKCM TCGA-ER-A19E-06A 2 4 In-Frame Intra-chr q31.1 q32 Transcription factor Seq+ 46050 ChimerSeq STARFusion TCGA_RNA-Seq MALSU1-GPNMB MALSU1 chr7 23347568 + GPNMB chr7 23306136 + Exonic hg19 SKCM TCGA-BF-AAP1-01A 107 323 In-Frame Intra-chr p15.3 p15.3 Seq+ 46051 ChimerSeq STARFusion TCGA_RNA-Seq MALSU1-GPNMB MALSU1 chr7 23347568 + GPNMB chr7 23306100 + Exonic hg19 SKCM TCGA-BF-AAP1-01A 20 323 In-Frame Intra-chr p15.3 p15.3 Seq+ 46052 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 SKCM TCGA-BF-AAP1-01A 2 2 In-Frame Intra-chr p11.21 p11.21 46053 ChimerSeq STARFusion TCGA_RNA-Seq IL12RB2-SDC3 IL12RB2 chr1 67816772 + SDC3 chr1 31350012 - Exonic hg19 SKCM TCGA-ER-A2NG-06A 4 19 In-Frame Intra-chr p31.3 p35.2 Seq+ 46054 ChimerSeq STARFusion TCGA_RNA-Seq KCNAB2-ACOT7 KCNAB2 chr1 6100705 + ACOT7 chr1 6409926 - Exonic hg19 SKCM TCGA-ER-A2NG-06A 3 8 In-Frame Intra-chr p36.31 p36.31 Seq+ 46055 ChimerSeq STARFusion TCGA_RNA-Seq KCNAB2-ACOT7 KCNAB2 chr1 6100705 + ACOT7 chr1 6324755 - Exonic hg19 SKCM TCGA-ER-A2NG-06A 2 8 Out-of-frame Intra-chr p36.31 p36.31 Seq+ 46056 ChimerSeq STARFusion TCGA_RNA-Seq KCNAB2-ACOT7 KCNAB2 chr1 6100705 + ACOT7 chr1 6341346 - Exonic hg19 SKCM TCGA-ER-A2NG-06A 2 8 Out-of-frame Intra-chr p36.31 p36.31 Seq+ 46057 ChimerSeq STARFusion TCGA_RNA-Seq FLJ39739-IL12RB2 FLJ39739 chr1 147931724 - IL12RB2 chr1 67787285 + Exonic hg19 SKCM TCGA-ER-A2NG-06A 3 1 3'UTR-CDS Intra-chr p31.3 46058 ChimerSeq STARFusion TCGA_RNA-Seq AKAP8L-WIZ AKAP8L chr19 15521331 - WIZ chr19 15541993 - Exonic hg19 SKCM TCGA-EE-A20B-06A 8 64 Out-of-frame Intra-chr p13.12 Transcription factor p13.12 Transcription factor Seq+ 46059 ChimerSeq STARFusion TCGA_RNA-Seq AKAP8L-WIZ AKAP8L chr19 15521331 - WIZ chr19 15540900 - Exonic hg19 SKCM TCGA-EE-A20B-06A 2 62 Out-of-frame Intra-chr p13.12 Transcription factor p13.12 Transcription factor Seq+ 46060 ChimerSeq STARFusion TCGA_RNA-Seq ELMO1-IGH@ ELMO1 chr7 37025574 - IGH@ chr14 107170239 - Exonic hg19 SKCM TCGA-EE-A20B-06A 8 1 Out-of-frame Inter-chr p14.1 32.33 46061 ChimerSeq STARFusion TCGA_RNA-Seq CLPTM1L-VARS CLPTM1L chr5 1338019 - VARS chr6_qbl_hap6 3056673 - Exonic hg19 SKCM TCGA-EE-A20F-06A 102 263 CDS-3'UTR Inter-chr p15.33 Seq+ 46062 ChimerSeq STARFusion TCGA_RNA-Seq EEF1G-NXF1 EEF1G chr11 62334278 - NXF1 chr11 62563817 - Exonic hg19 SKCM TCGA-EE-A20F-06A 66 249 In-Frame Intra-chr q12.3 q12.3 Seq+ 46063 ChimerSeq STARFusion TCGA_RNA-Seq CLPTM1L-VARS CLPTM1L chr5 1338019 - VARS chr6_apd_hap1 3077777 - Exonic hg19 SKCM TCGA-EE-A20F-06A 23 23 CDS-3'UTR Inter-chr p15.33 Seq+ 46064 ChimerSeq STARFusion TCGA_RNA-Seq MGRN1-C16orf96 MGRN1 chr16 4675049 + C16orf96 chr16 4621562 + Exonic hg19 SKCM TCGA-EE-A20F-06A 16 49 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 46065 ChimerSeq STARFusion TCGA_RNA-Seq SCYL3-CLPTM1L SCYL3 chr1 169857817 - CLPTM1L chr5 1325931 - Exonic hg19 SKCM TCGA-EE-A20F-06A 4 10 In-Frame Inter-chr q24.2 Other:SCY1 p15.33 Seq+ 46066 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-LMNA IGH@ chr14 106967050 - LMNA chr1 156076452 + Exonic hg19 SKCM TCGA-D3-A51E-06A 10 6 Out-of-frame Inter-chr 32.33 q22 46067 ChimerSeq STARFusion TCGA_RNA-Seq NPLOC4-P4HB NPLOC4 chr17 79577236 - P4HB chr17 79801968 - Exonic hg19 SKCM TCGA-D3-A51E-06A 6 22 In-Frame Intra-chr q25.3 q25.3 Seq+ 46068 ChimerSeq STARFusion TCGA_RNA-Seq LMNA-IGH@ LMNA chr1 156076473 + IGH@ chr14 106330476 - Exonic hg19 SKCM TCGA-D3-A51E-06A 11 1 Out-of-frame Inter-chr q22 32.33 46069 ChimerSeq STARFusion TCGA_RNA-Seq HCG18-IGH@ HCG18 chr6 30255464 - IGH@ chr14 106330057 - Exonic hg19 SKCM TCGA-D3-A51E-06A 6 1 Out-of-frame Inter-chr 32.33 46070 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-LMNA IGH@ chr14 107012939 - LMNA chr1 156076452 + Exonic hg19 SKCM TCGA-D3-A51E-06A 5 5 Out-of-frame Inter-chr 32.33 q22 46071 ChimerSeq STARFusion TCGA_RNA-Seq WNK1-IGH@ WNK1 chr12 970288 + IGH@ chr14 106331457 - Exonic hg19 SKCM TCGA-D3-A51E-06A 5 2 Out-of-frame Inter-chr p13.33 32.33 46072 ChimerSeq STARFusion TCGA_RNA-Seq GALNT2-RGS7 GALNT2 chr1 230203153 + RGS7 chr1 241146429 - Exonic hg19 SKCM TCGA-D3-A51E-06A 3 9 Out-of-frame Intra-chr q42.13 q43 Seq+ 46073 ChimerSeq STARFusion TCGA_RNA-Seq AHNAK-PKM AHNAK chr11 62283631 - PKM chr15 72501232 - Exonic hg19 SKCM TCGA-EE-A29X-06A 3 1 Out-of-frame Inter-chr q12.3 Tumor suppressor gene q23 46074 ChimerSeq STARFusion TCGA_RNA-Seq SNX29-HS3ST4 SNX29 chr16 12223615 + HS3ST4 chr16 26146933 + Exonic hg19 SKCM TCGA-EE-A29X-06A 2 5 In-Frame Intra-chr p13.13 p12.1 Seq+ 46075 ChimerSeq STARFusion TCGA_RNA-Seq ANAPC5-ADAM15 ANAPC5 chr12 121783642 - ADAM15 chr1 155034721 + Exonic hg19 SKCM TCGA-QB-AA9O-06A 71 318 In-Frame Inter-chr q24.31 q21.3 Seq+ 46076 ChimerSeq STARFusion TCGA_RNA-Seq ARID4B-IGFN1 ARID4B chr1 235491084 - IGFN1 chr1 201194952 + Exonic hg19 SKCM TCGA-QB-AA9O-06A 6 48 5'UTR-CDS Intra-chr q42.3 q32.1 Seq+ 46077 ChimerSeq STARFusion TCGA_RNA-Seq ARID4B-IGFN1 ARID4B chr1 235491084 - IGFN1 chr1 201191867 + Exonic hg19 SKCM TCGA-QB-AA9O-06A 5 48 5'UTR-CDS Intra-chr q42.3 q32.1 Seq+ 46078 ChimerSeq STARFusion TCGA_RNA-Seq SHC1-ANAPC5 SHC1 chr1 154946724 - ANAPC5 chr12 121779872 - Exonic hg19 SKCM TCGA-QB-AA9O-06A 4 22 5'UTR-CDS Inter-chr q21.3 q24.31 Seq+ 46079 ChimerSeq STARFusion TCGA_RNA-Seq TYR-DISC1 TYR chr11 88924586 + DISC1 chr1 231885672 + Exonic hg19 SKCM TCGA-QB-AA9O-06A 4 9 In-Frame Inter-chr q14.3 q42.2 46080 ChimerSeq STARFusion TCGA_RNA-Seq FOCAD-IFT74 FOCAD chr9 20823114 + IFT74 chr9 27009018 + Exonic hg19 SKCM TCGA-QB-AA9O-06A 4 4 Out-of-frame Intra-chr p21.3 p21.2 Seq+ 46081 ChimerSeq STARFusion TCGA_RNA-Seq IPO9-S100A13 IPO9 chr1 201798500 + S100A13 chr1 153600074 - Exonic hg19 SKCM TCGA-QB-AA9O-06A 2 10 CDS-5'UTR Intra-chr q32.1 q21.3 Seq+ 46082 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A1-PFDN2 SLC39A1 chr1 153939862 - PFDN2 chr1 161072165 - Exonic hg19 SKCM TCGA-QB-AA9O-06A 2 10 5'UTR-CDS Intra-chr q21.3 Tumor suppressor gene q23.3 Seq+ 46083 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CHMP4A IGH@ chr14 107218674 - CHMP4A chr14 24682836 - Exonic hg19 SKCM TCGA-D3-A2JL-06A 66 1 Out-of-frame Intra-chr 32.33 q12 46084 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CHMP4A IGH@ chr14 107131031 - CHMP4A chr14 24682836 - Exonic hg19 SKCM TCGA-D3-A2JL-06A 35 1 Out-of-frame Intra-chr 32.33 q12 46085 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CHMP4A IGH@ chr14 107131037 - CHMP4A chr14 24682842 - Exonic hg19 SKCM TCGA-D3-A2JL-06A 31 1 Out-of-frame Intra-chr 32.33 q12 46086 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2-REG4 NOTCH2 chr1 120611948 - REG4 chr1 120345788 - Exonic hg19 SKCM TCGA-D3-A5GU-06A 24 107 In-Frame Intra-chr p12 Oncogene Tumor suppressor gene p12 Seq+ 46087 ChimerSeq STARFusion TCGA_RNA-Seq YWHAG-OPA3 YWHAG chr7 75988039 - OPA3 chr19 46057169 - Exonic hg19 SKCM TCGA-D9-A149-06A 24 66 Out-of-frame Inter-chr q11.23 q13.32 Seq+ 46088 ChimerSeq STARFusion TCGA_RNA-Seq YWHAG-OPA3 YWHAG chr7 75988039 - OPA3 chr19 46032714 - Exonic hg19 SKCM TCGA-D9-A149-06A 4 66 Out-of-frame Inter-chr q11.23 q13.32 Seq+ 46089 ChimerSeq STARFusion TCGA_RNA-Seq TYRP1-PRIM2 TYRP1 chr9 12709784 + PRIM2 chr6 57398191 + Exonic hg19 SKCM TCGA-D3-A8GM-06A 10 1 Out-of-frame Inter-chr p23 p11.2 46090 ChimerSeq STARFusion TCGA_RNA-Seq KPNA4-WWTR1 KPNA4 chr3 160233240 - WWTR1 chr3 149375096 - Exonic hg19 SKCM TCGA-D3-A2J8-06A 84 330 CDS-5'UTR Intra-chr q25.33 q25.1 Seq+ 46091 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-LINC00883 IGH@ chr14 106967048 - LINC00883 chr3 106959862 + Exonic hg19 SKCM TCGA-D3-A2J8-06A 81 1 Out-of-frame Inter-chr 32.33 46092 ChimerSeq STARFusion TCGA_RNA-Seq BBX-KPNA4 BBX chr3 107466886 + KPNA4 chr3 160227659 - Exonic hg19 SKCM TCGA-D3-A2J8-06A 24 57 In-Frame Intra-chr q13.12 Transcription factor q25.33 Seq+ 46093 ChimerSeq STARFusion TCGA_RNA-Seq ZIC1-BBX ZIC1 chr3 147111729 + BBX chr3 107491475 + Exonic hg19 SKCM TCGA-D3-A2J8-06A 5 10 5'UTR-CDS Intra-chr q24 Tumor suppressor gene Transcription factor q13.12 Transcription factor Seq+ 46094 ChimerSeq STARFusion TCGA_RNA-Seq AKAP6-PRKD1 AKAP6 chr14 33069998 + PRKD1 chr14 30095762 - Exonic hg19 SKCM TCGA-EE-A181-06A 39 295 In-Frame Intra-chr q12 q12 Seq+ 46095 ChimerSeq STARFusion TCGA_RNA-Seq INTS8-ESRP1 INTS8 chr8 95841254 + ESRP1 chr8 95718153 + Exonic hg19 SKCM TCGA-EE-A181-06A 7 62 In-Frame Intra-chr q22.1 q22.1 Tumor suppressor gene Seq+ 46096 ChimerSeq STARFusion TCGA_RNA-Seq INTS8-ESRP1 INTS8 chr8 95841254 + ESRP1 chr8 95704905 + Exonic hg19 SKCM TCGA-EE-A181-06A 3 60 Out-of-frame Intra-chr q22.1 q22.1 Tumor suppressor gene Seq+ 46097 ChimerSeq STARFusion TCGA_RNA-Seq INTS8-ESRP1 INTS8 chr8 95841254 + ESRP1 chr8 95709080 + Exonic hg19 SKCM TCGA-EE-A181-06A 3 60 In-Frame Intra-chr q22.1 q22.1 Tumor suppressor gene Seq+ 46098 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SSH2 IGH@ chr14 106405610 - SSH2 chr17 28003891 - Exonic hg19 SKCM TCGA-EE-A181-06A 16 3 Out-of-frame Inter-chr 32.33 q11.2 46099 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-UBLCP1 IGH@ chr14 107122103 - UBLCP1 chr5 158695996 + Exonic hg19 SKCM TCGA-EE-A181-06A 16 2 Out-of-frame Inter-chr 32.33 q33.3 46100 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-POM121C IGL@ chr22 23223572 + POM121C chr7 75055649 - Exonic hg19 SKCM TCGA-EE-A181-06A 13 1 Out-of-frame Inter-chr q11.22 q11.23 46101 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-UBLCP1 IGH@ chr14 107183402 - UBLCP1 chr5 158696000 + Exonic hg19 SKCM TCGA-EE-A181-06A 8 2 Out-of-frame Inter-chr 32.33 q33.3 46102 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-UBLCP1 IGH@ chr14 107169943 - UBLCP1 chr5 158695992 + Exonic hg19 SKCM TCGA-EE-A181-06A 8 2 Out-of-frame Inter-chr 32.33 q33.3 46103 ChimerSeq STARFusion TCGA_RNA-Seq LOC100128675-LGI4 LOC100128675 chr19 35597133 - LGI4 chr19 35622946 - Exonic hg19 SKCM TCGA-D9-A3Z4-01A 3 2 3'UTR-CDS Intra-chr q13.12 46104 ChimerSeq STARFusion TCGA_RNA-Seq WIPI2-AIMP2 WIPI2 chr7 5257645 + AIMP2 chr7 6062934 + Exonic hg19 SKCM TCGA-FS-A1ZE-06A 77 211 Out-of-frame Intra-chr p22.1 p22.1 Tumor suppressor gene Seq+ 46105 ChimerSeq STARFusion TCGA_RNA-Seq RALGAPB-DSN1 RALGAPB chr20 37121775 + DSN1 chr20 35390951 - Exonic hg19 SKCM TCGA-FS-A1ZE-06A 32 184 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 46106 ChimerSeq STARFusion TCGA_RNA-Seq DHX35-TOX2 DHX35 chr20 37591050 + TOX2 chr20 42602007 + Exonic hg19 SKCM TCGA-FS-A1ZE-06A 14 20 Out-of-frame Intra-chr q11.23 q13.12 Seq+ 46107 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1755-CNBD2 KIAA1755 chr20 36851940 - CNBD2 chr20 34560551 + Exonic hg19 SKCM TCGA-FS-A1ZE-06A 2 59 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 46108 ChimerSeq STARFusion TCGA_RNA-Seq SOGA1-RALY SOGA1 chr20 35491061 - RALY chr20 32619328 + Exonic hg19 SKCM TCGA-FS-A1ZE-06A 2 32 CDS-5'UTR Intra-chr q11.23 q11.22 Seq+ 46109 ChimerSeq STARFusion TCGA_RNA-Seq MAPRE1-PLAGL2 MAPRE1 chr20 31407834 + PLAGL2 chr20 30790095 - Exonic hg19 SKCM TCGA-FS-A1ZE-06A 8 7 5'UTR-5'UTR Intra-chr q11.21 q11.21 Transcription factor Seq+ 46110 ChimerSeq STARFusion TCGA_RNA-Seq MPP6-HIBADH MPP6 chr7 24720139 + HIBADH chr7 27689242 - Exonic hg19 SKCM TCGA-FS-A1ZE-06A 3 11 Out-of-frame Intra-chr p15.3 p15.2 Seq+ 46111 ChimerSeq STARFusion TCGA_RNA-Seq POFUT1-MAPRE1 POFUT1 chr20 30804524 + MAPRE1 chr20 31413731 + Exonic hg19 SKCM TCGA-FS-A1ZE-06A 2 8 CDS-5'UTR Intra-chr q11.21 q11.21 Seq+ 46112 ChimerSeq STARFusion TCGA_RNA-Seq AHRR-CSNK1E AHRR chr5 376831 + CSNK1E chr22 38732711 - Exonic hg19 SKCM TCGA-D3-A1Q3-06A 21 93 CDS-5'UTR Inter-chr p15.33 Tumor suppressor gene Transcription factor q13.1 Seq+ 46113 ChimerSeq STARFusion TCGA_RNA-Seq WDR70-AGXT2 WDR70 chr5 37396672 + AGXT2 chr5 35014224 - Exonic hg19 SKCM TCGA-D3-A1Q3-06A 13 108 In-Frame Intra-chr p13.2 p13.2 Seq+ 46114 ChimerSeq STARFusion TCGA_RNA-Seq RAI14-MAPK9 RAI14 chr5 34757703 + MAPK9 chr5 179696409 - Exonic hg19 SKCM TCGA-D3-A1Q3-06A 18 67 In-Frame Intra-chr p13.2 q35.3 Tumor suppressor gene Seq+ 46115 ChimerSeq STARFusion TCGA_RNA-Seq MED15-AHRR MED15 chr22 20909435 + AHRR chr5 376725 + Exonic hg19 SKCM TCGA-D3-A1Q3-06A 9 85 In-Frame Inter-chr q11.21 p15.33 Tumor suppressor gene Transcription factor Seq+ 46116 ChimerSeq STARFusion TCGA_RNA-Seq PI4KA-CDH10 PI4KA chr22 21147481 - CDH10 chr5 24537783 - Exonic hg19 SKCM TCGA-D3-A1Q3-06A 16 35 In-Frame Inter-chr q11.21 p14.1 Seq+ 46117 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-NUP155 NIPBL chr5 36877280 + NUP155 chr5 37309369 - Exonic hg19 SKCM TCGA-D3-A1Q3-06A 7 50 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 46118 ChimerSeq STARFusion TCGA_RNA-Seq PER1-IGKC PER1 chr17 8046745 - IGKC chr2 89161435 - Exonic hg19 SKCM TCGA-D3-A1Q3-06A 19 1 Out-of-frame Inter-chr p13.1 Oncogene p11.2 46119 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-NUP155 NIPBL chr5 36877280 + NUP155 chr5 37310845 - Exonic hg19 SKCM TCGA-D3-A1Q3-06A 6 48 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 46120 ChimerSeq STARFusion TCGA_RNA-Seq UFD1L-PLEKHG4B UFD1L chr22 19466606 - PLEKHG4B chr5 181629 + Exonic hg19 SKCM TCGA-D3-A1Q3-06A 6 32 Out-of-frame Inter-chr p15.33 Seq+ 46121 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG3 STK25 chr2 242434915 - IGHG3 chr14 106237745 - Exonic hg19 SKCM TCGA-D3-A1Q3-06A 13 1 Out-of-frame Inter-chr q37.3 46122 ChimerSeq STARFusion TCGA_RNA-Seq PI4KA-MYO18B PI4KA chr22 21115641 - MYO18B chr22 26177701 + Exonic hg19 SKCM TCGA-D3-A1Q3-06A 3 26 Out-of-frame Intra-chr q11.21 q12.1 Tumor suppressor gene Seq+ 46123 ChimerSeq STARFusion TCGA_RNA-Seq PI4KA-MYO18B PI4KA chr22 21115592 - MYO18B chr22 26177701 + Exonic hg19 SKCM TCGA-D3-A1Q3-06A 2 26 Out-of-frame Intra-chr q11.21 q12.1 Tumor suppressor gene Seq+ 46124 ChimerSeq STARFusion TCGA_RNA-Seq C5orf42-SEMA5A C5orf42 chr5 37165641 - SEMA5A chr5 9238002 - Exonic hg19 SKCM TCGA-D3-A1Q3-06A 4 11 In-Frame Intra-chr p13.2 p15.31 Seq+ 46125 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC11-TPST2 ZDHHC11 chr5 840610 - TPST2 chr22 26924228 - Exonic hg19 SKCM TCGA-D3-A1Q3-06A 2 12 Out-of-frame Inter-chr p15.33 q12.1 Seq+ 46126 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-ROPN1L NIPBL chr5 36976504 + ROPN1L chr5 10442239 + Exonic hg19 SKCM TCGA-D3-A1Q3-06A 2 10 CDS-5'UTR Intra-chr p13.2 p15.2 Seq+ 46127 ChimerSeq STARFusion TCGA_RNA-Seq UBE2D2-CYSTM1 UBE2D2 chr5 139003046 + CYSTM1 chr5 139622890 + Exonic hg19 SKCM TCGA-FS-A1ZM-06A 10 23 Out-of-frame Intra-chr q31.2 q31.3 46128 ChimerSeq STARFusion TCGA_RNA-Seq UBAC2-SARM1 UBAC2 chr13 99853193 + SARM1 chr17 26711376 + Exonic hg19 SKCM TCGA-FS-A1ZM-06A 3 7 Out-of-frame Inter-chr q32.3 q11.2 Seq+ 46129 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57886157 + Exonic hg19 SKCM TCGA-ER-A19H-06A 92 175 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 46130 ChimerSeq STARFusion TCGA_RNA-Seq DCLK2-UST DCLK2 chr4 151000600 + UST chr6 149394969 + Exonic hg19 SKCM TCGA-ER-A19H-06A 7 16 In-Frame Inter-chr q31.23 CAMK:DCAMKL q25.1 Seq+ 46131 ChimerSeq STARFusion TCGA_RNA-Seq TNS3-PKD1L1 TNS3 chr7 47546505 - PKD1L1 chr7 47894863 - Exonic hg19 SKCM TCGA-ER-A19H-06A 5 21 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 46132 ChimerSeq STARFusion TCGA_RNA-Seq NELL1-C11orf75 NELL1 chr11 20907086 + C11orf75 chr11 93232514 - Exonic hg19 SKCM TCGA-ER-A19H-06A 4 24 CDS-5'UTR Intra-chr p15.1 Seq+ 46133 ChimerSeq STARFusion TCGA_RNA-Seq PRKCSH-PGPEP1 PRKCSH chr19 11556288 + PGPEP1 chr19 18466705 + Exonic hg19 SKCM TCGA-ER-A19H-06A 2 14 Out-of-frame Intra-chr p13.2 p13.11 Seq+ 46134 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A42-SMARCA4 SLC25A42 chr19 19174924 + SMARCA4 chr19 11123625 + Exonic hg19 SKCM TCGA-ER-A19H-06A 3 2 5'UTR-CDS Intra-chr p13.11 p13.2 Oncogene Tumor suppressor gene Seq+ 46135 ChimerSeq STARFusion TCGA_RNA-Seq SLC26A11-RPTOR SLC26A11 chr17 78194295 + RPTOR chr17 78681641 + Exonic hg19 SKCM TCGA-D3-A3CE-06A 5 7 5'UTR-CDS Intra-chr q25.3 q25.3 Seq+ 46136 ChimerSeq STARFusion TCGA_RNA-Seq BIRC7-ZNF200 BIRC7 chr20 61870962 + ZNF200 chr16 3285360 - Exonic hg19 SKCM TCGA-EE-A2GK-06A 2 12 3'UTR-5'UTR Inter-chr q13.33 p13.3 Transcription factor Seq+ 46137 ChimerSeq STARFusion TCGA_RNA-Seq VIM-LMNB1 VIM chr10 17271727 + LMNB1 chr5 126113336 + Exonic hg19 SKCM TCGA-EE-A3AC-06A 9 1 Out-of-frame Inter-chr p13 Tumor suppressor gene q23.2 46138 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-IGHG2 ACTB chr7 5567637 - IGHG2 chr14 106109423 - Exonic hg19 SKCM TCGA-D3-A2JD-06A 3 6 Out-of-frame Inter-chr p22.1 46139 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2IP-TMEM232 ERBB2IP chr5 65350779 + TMEM232 chr5 109760617 - Exonic hg19 SKCM TCGA-D3-A2JH-06A 8 82 Out-of-frame Intra-chr q22.1 Seq+ 46140 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2IP-TMEM232 ERBB2IP chr5 65350779 + TMEM232 chr5 109756457 - Exonic hg19 SKCM TCGA-D3-A2JH-06A 3 82 In-Frame Intra-chr q22.1 Seq+ 46141 ChimerSeq STARFusion TCGA_RNA-Seq LOC642236-FRG1B LOC642236 chr9 68438563 - FRG1B chr20 29625871 + Exonic hg19 SKCM TCGA-D3-A2JH-06A 3 10 Out-of-frame Inter-chr 46142 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-GNAS MYH9 chr22 36783852 - GNAS chr20 57470667 + Exonic hg19 SKCM TCGA-D3-A2JH-06A 2 1 5'UTR-5'UTR Inter-chr q12.3 Oncogene Tumor suppressor gene q13.32 Oncogene 46143 ChimerSeq STARFusion TCGA_RNA-Seq SUGT1-NOL6 SUGT1 chr13 53237247 + NOL6 chr9 33472410 - Exonic hg19 SKCM TCGA-D3-A2JH-06A 2 1 In-Frame Inter-chr q14.3 p13.3 46144 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 SKCM TCGA-D3-A2JH-06A 2 0 In-Frame Intra-chr p11.21 p11.21 46145 ChimerSeq STARFusion TCGA_RNA-Seq MYO10-IGL@ MYO10 chr5 16935897 - IGL@ chr22 22749523 + Exonic hg19 SKCM TCGA-EB-A5KH-06A 12 97 Out-of-frame Inter-chr p15.1 q11.22 46146 ChimerSeq STARFusion TCGA_RNA-Seq MYO10-IGL@ MYO10 chr5 16935897 - IGL@ chr22 22712304 + Exonic hg19 SKCM TCGA-EB-A5KH-06A 2 97 Out-of-frame Inter-chr p15.1 q11.22 46147 ChimerSeq STARFusion TCGA_RNA-Seq PPIP5K2-PRODH PPIP5K2 chr5 102509676 + PRODH chr22 18907311 - Exonic hg19 SKCM TCGA-EB-A5KH-06A 9 63 In-Frame Inter-chr q21.1 q11.21 Tumor suppressor gene Seq+ 46148 ChimerSeq STARFusion TCGA_RNA-Seq TMEM167A-PAM TMEM167A chr5 82357696 - PAM chr5 102295579 + Exonic hg19 SKCM TCGA-EB-A5KH-06A 12 41 Out-of-frame Intra-chr q14.2 q21.1 Seq+ 46149 ChimerSeq STARFusion TCGA_RNA-Seq SEMA5A-RBFOX2 SEMA5A chr5 9545696 - RBFOX2 chr22 36157515 - Exonic hg19 SKCM TCGA-EB-A5KH-06A 4 65 5'UTR-CDS Inter-chr p15.31 Seq+ 46150 ChimerSeq STARFusion TCGA_RNA-Seq SPECC1L-MED15 SPECC1L chr22 24808675 + MED15 chr22 20905723 + Exonic hg19 SKCM TCGA-EB-A5KH-06A 8 18 In-Frame Intra-chr q11.23 q11.21 Seq+ 46151 ChimerSeq STARFusion TCGA_RNA-Seq COMT-ZDHHC8 COMT chr22 19929420 + ZDHHC8 chr22 20126717 + Exonic hg19 SKCM TCGA-EB-A5KH-06A 6 23 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 46152 ChimerSeq STARFusion TCGA_RNA-Seq CWC27-HMGN1P13 CWC27 chr5 64070614 + HMGN1P13 chr5 110908022 - Exonic hg19 SKCM TCGA-EB-A5KH-06A 7 17 Out-of-frame Intra-chr q12.3 q22.1 46153 ChimerSeq STARFusion TCGA_RNA-Seq COMT-ZDHHC8 COMT chr22 19939177 + ZDHHC8 chr22 20126717 + Exonic hg19 SKCM TCGA-EB-A5KH-06A 4 23 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 46154 ChimerSeq STARFusion TCGA_RNA-Seq RBFOX2-MED15 RBFOX2 chr22 36424288 - MED15 chr22 20905723 + Exonic hg19 SKCM TCGA-EB-A5KH-06A 5 16 In-Frame Intra-chr q11.21 Seq+ 46155 ChimerSeq STARFusion TCGA_RNA-Seq TOB2-MPPED1 TOB2 chr22 41842383 - MPPED1 chr22 43820914 + Exonic hg19 SKCM TCGA-EB-A5KH-06A 6 12 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 46156 ChimerSeq STARFusion TCGA_RNA-Seq ACO2-AHRR ACO2 chr22 41865186 + AHRR chr5 422844 + Exonic hg19 SKCM TCGA-EB-A5KH-06A 7 5 5'UTR-CDS Inter-chr q13.2 p15.33 Tumor suppressor gene Transcription factor Seq+ 46157 ChimerSeq STARFusion TCGA_RNA-Seq TMEM167A-ABLIM3 TMEM167A chr5 82357696 - ABLIM3 chr5 148596522 + Exonic hg19 SKCM TCGA-EB-A5KH-06A 3 20 Out-of-frame Intra-chr q14.2 q32 Seq+ 46158 ChimerSeq STARFusion TCGA_RNA-Seq DPYSL3-IL17B DPYSL3 chr5 146889041 - IL17B chr5 148756588 - Exonic hg19 SKCM TCGA-EB-A5KH-06A 4 9 In-Frame Intra-chr q32 q32 Seq+ 46159 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-PIP5K1P1 KCTD20 chr6 36457998 + PIP5K1P1 chr6 7987765 + Exonic hg19 SKCM TCGA-EB-A5KH-06A 6 0 Out-of-frame Intra-chr p21.31 p24.3 46160 ChimerSeq STARFusion TCGA_RNA-Seq TOB2-MPPED1 TOB2 chr22 41842379 - MPPED1 chr22 43820914 + Exonic hg19 SKCM TCGA-EB-A5KH-06A 3 12 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 46161 ChimerSeq STARFusion TCGA_RNA-Seq HMGXB3-PAM HMGXB3 chr5 149386210 + PAM chr5 102237060 + Exonic hg19 SKCM TCGA-EB-A5KH-06A 2 15 In-Frame Intra-chr q32 q21.1 Seq+ 46162 ChimerSeq STARFusion TCGA_RNA-Seq UFSP2-ZNF621 UFSP2 chr4 186347020 - ZNF621 chr3 40615874 + Exonic hg19 SKCM TCGA-EB-A5KH-06A 4 5 3'UTR-3'UTR Inter-chr q35.1 p22.1 Transcription factor Seq+ 46163 ChimerSeq STARFusion TCGA_RNA-Seq L3MBTL2-EFCAB6 L3MBTL2 chr22 41610030 + EFCAB6 chr22 44074043 - Exonic hg19 SKCM TCGA-EB-A5KH-06A 3 4 In-Frame Intra-chr q13.2 q13.31 Seq+ 46164 ChimerSeq STARFusion TCGA_RNA-Seq COL1A1-IGH@ COL1A1 chr17 48264396 - IGH@ chr14 106207763 - Exonic hg19 SKCM TCGA-GN-A265-06A 3 87 Out-of-frame Inter-chr q21.33 Oncogene 32.33 46165 ChimerSeq STARFusion TCGA_RNA-Seq COL1A1-IGHG1 COL1A1 chr17 48264396 - IGHG1 chr14 106207763 - Exonic hg19 SKCM TCGA-GN-A265-06A 3 51 Out-of-frame Inter-chr q21.33 Oncogene q32.33 46166 ChimerSeq STARFusion TCGA_RNA-Seq MIER2-SHC2 MIER2 chr19 311845 - SHC2 chr19 425231 - Exonic hg19 SKCM TCGA-GN-A265-06A 5 22 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 46167 ChimerSeq STARFusion TCGA_RNA-Seq MIER2-SHC2 MIER2 chr19 311845 - SHC2 chr19 430747 - Exonic hg19 SKCM TCGA-GN-A265-06A 2 21 In-Frame Intra-chr p13.3 p13.3 Seq+ 46168 ChimerSeq STARFusion TCGA_RNA-Seq MIER2-SHC2 MIER2 chr19 312191 - SHC2 chr19 425231 - Exonic hg19 SKCM TCGA-GN-A265-06A 2 21 In-Frame Intra-chr p13.3 p13.3 Seq+ 46169 ChimerSeq STARFusion TCGA_RNA-Seq TMX1-TRIM9 TMX1 chr14 51710689 + TRIM9 chr14 51467558 - Exonic hg19 SKCM TCGA-GN-A265-06A 2 18 In-Frame Intra-chr q22.1 q22.1 Seq+ 46170 ChimerSeq STARFusion TCGA_RNA-Seq COG3-PSMB7 COG3 chr13 46039345 + PSMB7 chr9 127119194 - Exonic hg19 SKCM TCGA-EB-A4OZ-01A 2 1 In-Frame Inter-chr q14.13 q33.3 Seq+ 46171 ChimerSeq STARFusion TCGA_RNA-Seq RPS11-VIM RPS11 chr19 50000812 + VIM chr10 17271964 + Exonic hg19 SKCM TCGA-EE-A29B-06A 3 1 Out-of-frame Inter-chr q13.33 p13 Tumor suppressor gene 46172 ChimerSeq STARFusion TCGA_RNA-Seq BSG-HN1L BSG chr19 571579 + HN1L chr16 1735440 + Exonic hg19 SKCM TCGA-EE-A29B-06A 2 2 In-Frame Inter-chr p13.3 46173 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-GSE1 SLC7A5 chr16 87885330 - GSE1 chr16 85682158 + Exonic hg19 SKCM TCGA-EE-A2A1-06A 3 3 Out-of-frame Intra-chr q24.2 q24.1 46174 ChimerSeq STARFusion TCGA_RNA-Seq TTYH3-MAD1L1 TTYH3 chr7 2671912 + MAD1L1 chr7 1938026 - Exonic hg19 SKCM TCGA-EE-A2A1-06A 2 4 Out-of-frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 46175 ChimerSeq STARFusion TCGA_RNA-Seq VAV2-RXRA VAV2 chr9 136857197 - RXRA chr9 137293478 + Exonic hg19 SKCM TCGA-EE-A2A1-06A 2 4 Out-of-frame Intra-chr q34.2 q34.2 Transcription factor Seq+ 46176 ChimerSeq STARFusion TCGA_RNA-Seq MOSPD2-PIR MOSPD2 chrX 14891880 + PIR chrX 15425672 - Exonic hg19 SKCM TCGA-EE-A2A1-06A 2 1 In-Frame Intra-chr p22.2 p22.2 46177 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-LSAMP ZBTB20 chr3 114619151 - LSAMP chr3 115529261 - Exonic hg19 SKCM TCGA-EE-A3J4-06A 3 13 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.31 Tumor suppressor gene Seq+ 46178 ChimerSeq STARFusion TCGA_RNA-Seq PACSIN2-EEFSEC PACSIN2 chr22 43342903 - EEFSEC chr3 128126912 + Exonic hg19 SKCM TCGA-EE-A3J4-06A 2 9 5'UTR-CDS Inter-chr q13.2 q21.3 Seq+ 46179 ChimerSeq STARFusion TCGA_RNA-Seq RNF157-RHBDF2 RNF157 chr17 74208445 - RHBDF2 chr17 74483991 - Exonic hg19 SKCM TCGA-EE-A3J4-06A 2 3 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 46180 ChimerSeq STARFusion TCGA_RNA-Seq ZFR-MTMR12 ZFR chr5 32444335 - MTMR12 chr5 32230453 - Exonic hg19 SKCM TCGA-EB-A3HV-01A 15 68 Out-of-frame Intra-chr p13.3 p13.3 46181 ChimerSeq STARFusion TCGA_RNA-Seq HMGA2-GNS HMGA2 chr12 66232349 + GNS chr12 65146537 - Exonic hg19 SKCM TCGA-EB-A3HV-01A 12 39 In-Frame Intra-chr q14.3 Transcription factor q14.3 Seq+ 46182 ChimerSeq STARFusion TCGA_RNA-Seq SLC20A2-CORO6 SLC20A2 chr8 42278757 - CORO6 chr17 27943201 - Exonic hg19 SKCM TCGA-EB-A3HV-01A 5 37 Out-of-frame Inter-chr p11.21 q11.2 Seq+ 46183 ChimerSeq STARFusion TCGA_RNA-Seq B2M-PPP4R1 B2M chr15 45003811 + PPP4R1 chr18 9562073 - Exonic hg19 SKCM TCGA-ER-A198-06A 61 459 Out-of-frame Inter-chr Oncogene p11.22 Seq+ 46184 ChimerSeq STARFusion TCGA_RNA-Seq CD63-C12orf10 CD63 chr12 56120484 - C12orf10 chr12 53693934 + Exonic hg19 SKCM TCGA-D3-A3C1-06A 559 2085 In-Frame Intra-chr q13.2 q13.13 Seq+ 46185 ChimerSeq STARFusion TCGA_RNA-Seq HIPK2-ARPC1A HIPK2 chr7 139477404 - ARPC1A chr7 98935804 + Exonic hg19 SKCM TCGA-D3-A3C1-06A 55 134 In-Frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q22.1 Seq+ 46186 ChimerSeq STARFusion TCGA_RNA-Seq KMT2C-LHFPL3 KMT2C chr7 152132711 - LHFPL3 chr7 104377122 + Exonic hg19 SKCM TCGA-D3-A3C1-06A 17 120 Out-of-frame Intra-chr q36.1 Oncogene Tumor suppressor gene q22.2 Seq+ 46187 ChimerSeq STARFusion TCGA_RNA-Seq CNOT4-AKR1B10 CNOT4 chr7 135194637 - AKR1B10 chr7 134215395 + Exonic hg19 SKCM TCGA-D3-A3C1-06A 9 82 5'UTR-CDS Intra-chr q33 q33 Seq+ 46188 ChimerSeq STARFusion TCGA_RNA-Seq PCBP2-HMGA2 PCBP2 chr12 53846160 + HMGA2 chr12 66221781 + Exonic hg19 SKCM TCGA-D3-A3C1-06A 17 38 5'UTR-CDS Intra-chr q13.13 q14.3 Transcription factor Seq+ 46189 ChimerSeq STARFusion TCGA_RNA-Seq JHDM1D-ATP5J2 JHDM1D chr7 139827242 - ATP5J2 chr7 99057816 - Exonic hg19 SKCM TCGA-D3-A3C1-06A 4 33 Out-of-frame Intra-chr q22.1 46190 ChimerSeq STARFusion TCGA_RNA-Seq JHDM1D-PTCD1 JHDM1D chr7 139827242 - PTCD1 chr7 99057816 - Exonic hg19 SKCM TCGA-D3-A3C1-06A 4 22 CDS-5'UTR Intra-chr q22.1 46191 ChimerSeq STARFusion TCGA_RNA-Seq JHDM1D-ATP5J2 JHDM1D chr7 139826437 - ATP5J2 chr7 99057816 - Exonic hg19 SKCM TCGA-D3-A3C1-06A 2 27 Out-of-frame Intra-chr q22.1 46192 ChimerSeq STARFusion TCGA_RNA-Seq GTF2H3-NCOR2 GTF2H3 chr12 124130108 + NCOR2 chr12 124862930 - Exonic hg19 SKCM TCGA-D3-A3C1-06A 3 19 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 46193 ChimerSeq STARFusion TCGA_RNA-Seq JHDM1D-PTCD1 JHDM1D chr7 139826437 - PTCD1 chr7 99057816 - Exonic hg19 SKCM TCGA-D3-A3C1-06A 2 22 CDS-5'UTR Intra-chr q22.1 46194 ChimerSeq STARFusion TCGA_RNA-Seq RPF1-PRKACB RPF1 chr1 84945192 + PRKACB chr1 84700863 + Exonic hg19 SKCM TCGA-D3-A3C1-06A 2 10 In-Frame Intra-chr p22.3 Tumor suppressor gene p31.1 Seq+ 46195 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-RPTOR ZFAND3 chr6 37787792 + RPTOR chr17 78865520 + Exonic hg19 SKCM TCGA-EE-A29L-06A 9 25 Out-of-frame Inter-chr p21.2 q25.3 Seq+ 46196 ChimerSeq STARFusion TCGA_RNA-Seq SMURF2-UBAC2 SMURF2 chr17 62579579 - UBAC2 chr13 99966351 + Exonic hg19 SKCM TCGA-EE-A29L-06A 9 24 In-Frame Inter-chr q24.1 q32.3 Seq+ 46197 ChimerSeq STARFusion TCGA_RNA-Seq MICU3-TGFBR3 MICU3 chr8 16885169 + TGFBR3 chr1 92200516 - Exonic hg19 SKCM TCGA-EE-A29L-06A 4 34 Out-of-frame Inter-chr p22 p22.1 Tumor suppressor gene Seq+ 46198 ChimerSeq STARFusion TCGA_RNA-Seq USP25-SLITRK6 USP25 chr21 17163983 + SLITRK6 chr13 86373121 - Exonic hg19 SKCM TCGA-EE-A29L-06A 3 24 CDS-5'UTR Inter-chr q21.1 q31.1 Seq+ 46199 ChimerSeq STARFusion TCGA_RNA-Seq SREBF2-VWFP1 SREBF2 chr22 42229362 + VWFP1 chr22 17184996 - Exonic hg19 SKCM TCGA-EE-A29L-06A 6 5 Out-of-frame Intra-chr q13.2 Transcription factor q11.1 46200 ChimerSeq STARFusion TCGA_RNA-Seq NPTX1-FBXO7 NPTX1 chr17 78449311 - FBXO7 chr22 32875120 + Exonic hg19 SKCM TCGA-EE-A29L-06A 2 10 In-Frame Inter-chr q25.3 q12.3 Seq+ 46201 ChimerSeq STARFusion TCGA_RNA-Seq LDLRAD3-TRIM44 LDLRAD3 chr11 36057799 + TRIM44 chr11 35827908 + Exonic hg19 SKCM TCGA-FR-A726-01A 23 116 Out-of-frame Intra-chr p13 p13 Seq+ 46202 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-PIP5K1P1 KCTD20 chr6 36457998 + PIP5K1P1 chr6 7987765 + Exonic hg19 SKCM TCGA-FR-A726-01A 22 0 Out-of-frame Intra-chr p21.31 p24.3 46203 ChimerSeq STARFusion TCGA_RNA-Seq BAGE2-CTBP2P1 BAGE2 chr21 11058161 - CTBP2P1 chrY 59001440 + Exonic hg19 SKCM TCGA-FR-A726-01A 7 12 Out-of-frame Inter-chr p11.2 46204 ChimerSeq STARFusion TCGA_RNA-Seq NEDD4L-IMMP2L NEDD4L chr18 56001124 + IMMP2L chr7 110303777 - Exonic hg19 SKCM TCGA-FR-A726-01A 2 21 In-Frame Inter-chr q21.31 Tumor suppressor gene q31.1 Seq+ 46205 ChimerSeq STARFusion TCGA_RNA-Seq NEDD4L-IMMP2L NEDD4L chr18 56001124 + IMMP2L chr7 110526751 - Exonic hg19 SKCM TCGA-FR-A726-01A 2 21 Out-of-frame Inter-chr q21.31 Tumor suppressor gene q31.1 Seq+ 46206 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57990165 + VMP1 chr17 57915656 + Exonic hg19 SKCM TCGA-W3-AA21-06A 7 28 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 46207 ChimerSeq STARFusion TCGA_RNA-Seq TRIM2-LRBA TRIM2 chr4 154073764 + LRBA chr4 151738409 - Exonic hg19 SKCM TCGA-FW-A3R5-06A 38 139 5'UTR-CDS Intra-chr q31.3 q31.3 Seq+ 46208 ChimerSeq STARFusion TCGA_RNA-Seq TRIM2-LRBA TRIM2 chr4 154074422 + LRBA chr4 151738409 - Exonic hg19 SKCM TCGA-FW-A3R5-06A 9 136 5'UTR-CDS Intra-chr q31.3 q31.3 Seq+ 46209 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD28-TM9SF4 ANKRD28 chr3 15836730 - TM9SF4 chr20 30720816 + Exonic hg19 SKCM TCGA-FS-A1ZF-06A 6 48 In-Frame Inter-chr p25.1 q11.21 Seq+ 46210 ChimerSeq STARFusion TCGA_RNA-Seq BRAF-MRPS33 BRAF chr7 140624366 - MRPS33 chr7 140710460 - Exonic hg19 SKCM TCGA-FS-A1ZF-06A 3 28 CDS-5'UTR Intra-chr q34 TKL:RAF Oncogene q34 Seq+ 46211 ChimerSeq STARFusion TCGA_RNA-Seq BRAF-MRPS33 BRAF chr7 140624366 - MRPS33 chr7 140706335 - Exonic hg19 SKCM TCGA-FS-A1ZF-06A 2 28 Out-of-frame Intra-chr q34 TKL:RAF Oncogene q34 Seq+ 46212 ChimerSeq STARFusion TCGA_RNA-Seq METTL21B-MBD6 METTL21B chr12 58166911 + MBD6 chr12 57917812 + Exonic hg19 SKCM TCGA-FS-A1ZF-06A 2 9 CDS-5'UTR Intra-chr q13.3 Transcription factor Seq+ 46213 ChimerSeq STARFusion TCGA_RNA-Seq CNOT10-CMTM7 CNOT10 chr3 32769362 + CMTM7 chr3 32524236 + Exonic hg19 SKCM TCGA-FS-A1ZF-06A 2 8 CDS-3'UTR Intra-chr p22.3 p22.3 Seq+ 46214 ChimerSeq STARFusion TCGA_RNA-Seq LMNA-RAF1 LMNA chr1 156107534 + RAF1 chr3 12641914 - Exonic hg19 SKCM TCGA-EB-A5SF-01A 5 29 In-Frame Inter-chr q22 p25.2 TKL:RAF Oncogene Seq+ 46215 ChimerSeq STARFusion TCGA_RNA-Seq KRT17-LRP10 KRT17 chr17 39740505 - LRP10 chr14 23346558 + Exonic hg19 SKCM TCGA-EB-A5SF-01A 5 2 Out-of-frame Inter-chr q21.2 q11.2 46216 ChimerSeq STARFusion TCGA_RNA-Seq PDE4DIP-OSMR PDE4DIP chr1 144866592 - OSMR chr5 38932565 + Exonic hg19 SKCM TCGA-EB-A5SF-01A 2 12 Out-of-frame Inter-chr q21.2 Oncogene p13.1 Seq+ 46217 ChimerSeq STARFusion TCGA_RNA-Seq GSE1-C16orf74 GSE1 chr16 85682357 + C16orf74 chr16 85724383 - Exonic hg19 SKCM TCGA-YG-AA3O-06A 128 463 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 46218 ChimerSeq STARFusion TCGA_RNA-Seq SPG7-GSE1 SPG7 chr16 89599044 + GSE1 chr16 85682158 + Exonic hg19 SKCM TCGA-YG-AA3O-06A 124 473 Out-of-frame Intra-chr q24.3 q24.1 Seq+ 46219 ChimerSeq STARFusion TCGA_RNA-Seq JAZF1-CREB5 JAZF1 chr7 28220082 - CREB5 chr7 28609983 + Exonic hg19 SKCM TCGA-YG-AA3O-06A 37 89 Out-of-frame Intra-chr p15.1 Transcription factor p15.1 Transcription factor Seq+ 46220 ChimerSeq STARFusion TCGA_RNA-Seq TERF2IP-CMTM1 TERF2IP chr16 75682450 + CMTM1 chr16 66611007 + Exonic hg19 SKCM TCGA-YG-AA3O-06A 27 116 Out-of-frame Intra-chr q23.1 q21 Seq+ 46221 ChimerSeq STARFusion TCGA_RNA-Seq TERF2IP-CKLF TERF2IP chr16 75682450 + CKLF chr16 66599789 + Exonic hg19 SKCM TCGA-YG-AA3O-06A 14 99 Out-of-frame Intra-chr q23.1 q21 Tumor suppressor gene Seq+ 46222 ChimerSeq STARFusion TCGA_RNA-Seq PAFAH1B1-ABR PAFAH1B1 chr17 2497300 + ABR chr17 962107 - Exonic hg19 SKCM TCGA-YG-AA3O-06A 29 25 5'UTR-CDS Intra-chr p13.3 Tumor suppressor gene p13.3 Seq+ 46223 ChimerSeq STARFusion TCGA_RNA-Seq TERF2IP-CMTM1 TERF2IP chr16 75682450 + CMTM1 chr16 66603839 + Exonic hg19 SKCM TCGA-YG-AA3O-06A 3 116 Out-of-frame Intra-chr q23.1 q21 Seq+ 46224 ChimerSeq STARFusion TCGA_RNA-Seq BCL2L13-USP18 BCL2L13 chr22 18121652 + USP18 chr22 18650022 + Exonic hg19 SKCM TCGA-ER-A197-06A 33 221 5'UTR-CDS Intra-chr q11.21 q11.21 46225 ChimerSeq STARFusion TCGA_RNA-Seq CHD2-ACSBG1 CHD2 chr15 93444529 + ACSBG1 chr15 78466181 - Exonic hg19 SKCM TCGA-ER-A197-06A 38 91 Out-of-frame Intra-chr q26.1 q25.1 Seq+ 46226 ChimerSeq STARFusion TCGA_RNA-Seq PAFAH1B1-CTDNEP1 PAFAH1B1 chr17 2497300 + CTDNEP1 chr17 7150662 - Exonic hg19 SKCM TCGA-ER-A197-06A 40 78 5'UTR-CDS Intra-chr p13.3 Tumor suppressor gene p13.1 Seq+ 46227 ChimerSeq STARFusion TCGA_RNA-Seq MCAT-GTSE1 MCAT chr22 43533087 - GTSE1 chr22 46708038 + Exonic hg19 SKCM TCGA-ER-A197-06A 26 101 In-Frame Intra-chr q13.2 q13.31 Seq+ 46228 ChimerSeq STARFusion TCGA_RNA-Seq CHD2-ACSBG1 CHD2 chr15 93444529 + ACSBG1 chr15 78466866 - Exonic hg19 SKCM TCGA-ER-A197-06A 7 91 Out-of-frame Intra-chr q26.1 q25.1 Seq+ 46229 ChimerSeq STARFusion TCGA_RNA-Seq MCAT-GTSE1 MCAT chr22 43537168 - GTSE1 chr22 46708038 + Exonic hg19 SKCM TCGA-ER-A197-06A 4 101 Out-of-frame Intra-chr q13.2 q13.31 Seq+ 46230 ChimerSeq STARFusion TCGA_RNA-Seq PAFAH1B1-CTDNEP1 PAFAH1B1 chr17 2497300 + CTDNEP1 chr17 7154920 - Exonic hg19 SKCM TCGA-ER-A197-06A 6 78 5'UTR-5'UTR Intra-chr p13.3 Tumor suppressor gene p13.1 Seq+ 46231 ChimerSeq STARFusion TCGA_RNA-Seq NSA2-PCDHA1 NSA2 chr5 74063188 + PCDHA1 chr5 140358534 + Exonic hg19 SKCM TCGA-ER-A197-06A 4 69 In-Frame Intra-chr q13.3 q31.3 46232 ChimerSeq STARFusion TCGA_RNA-Seq NSA2-PCDHA10 NSA2 chr5 74063188 + PCDHA10 chr5 140358534 + Exonic hg19 SKCM TCGA-ER-A197-06A 4 69 In-Frame Intra-chr q13.3 q31.3 46233 ChimerSeq STARFusion TCGA_RNA-Seq NSA2-PCDHA11 NSA2 chr5 74063188 + PCDHA11 chr5 140358534 + Exonic hg19 SKCM TCGA-ER-A197-06A 4 69 In-Frame Intra-chr q13.3 q31.3 46234 ChimerSeq STARFusion TCGA_RNA-Seq NSA2-PCDHA12 NSA2 chr5 74063188 + PCDHA12 chr5 140358534 + Exonic hg19 SKCM TCGA-ER-A197-06A 4 69 In-Frame Intra-chr q13.3 q31.3 46235 ChimerSeq STARFusion TCGA_RNA-Seq NSA2-PCDHA13 NSA2 chr5 74063188 + PCDHA13 chr5 140358534 + Exonic hg19 SKCM TCGA-ER-A197-06A 4 69 In-Frame Intra-chr q13.3 q31.3 Seq+ 46236 ChimerSeq STARFusion TCGA_RNA-Seq NSA2-PCDHA2 NSA2 chr5 74063188 + PCDHA2 chr5 140358534 + Exonic hg19 SKCM TCGA-ER-A197-06A 4 69 In-Frame Intra-chr q13.3 q31.3 46237 ChimerSeq STARFusion TCGA_RNA-Seq NSA2-PCDHA3 NSA2 chr5 74063188 + PCDHA3 chr5 140358534 + Exonic hg19 SKCM TCGA-ER-A197-06A 4 69 In-Frame Intra-chr q13.3 q31.3 Seq+ 46238 ChimerSeq STARFusion TCGA_RNA-Seq NSA2-PCDHA4 NSA2 chr5 74063188 + PCDHA4 chr5 140358534 + Exonic hg19 SKCM TCGA-ER-A197-06A 4 69 In-Frame Intra-chr q13.3 q31.3 46239 ChimerSeq STARFusion TCGA_RNA-Seq NSA2-PCDHA5 NSA2 chr5 74063188 + PCDHA5 chr5 140358534 + Exonic hg19 SKCM TCGA-ER-A197-06A 4 69 In-Frame Intra-chr q13.3 q31.3 46240 ChimerSeq STARFusion TCGA_RNA-Seq NSA2-PCDHA6 NSA2 chr5 74063188 + PCDHA6 chr5 140358534 + Exonic hg19 SKCM TCGA-ER-A197-06A 4 69 In-Frame Intra-chr q13.3 q31.3 46241 ChimerSeq STARFusion TCGA_RNA-Seq NSA2-PCDHA7 NSA2 chr5 74063188 + PCDHA7 chr5 140358534 + Exonic hg19 SKCM TCGA-ER-A197-06A 4 69 In-Frame Intra-chr q13.3 q31.3 46242 ChimerSeq STARFusion TCGA_RNA-Seq NSA2-PCDHA8 NSA2 chr5 74063188 + PCDHA8 chr5 140358534 + Exonic hg19 SKCM TCGA-ER-A197-06A 4 69 In-Frame Intra-chr q13.3 q31.3 46243 ChimerSeq STARFusion TCGA_RNA-Seq NSA2-PCDHA9 NSA2 chr5 74063188 + PCDHA9 chr5 140358534 + Exonic hg19 SKCM TCGA-ER-A197-06A 4 69 In-Frame Intra-chr q13.3 q31.3 46244 ChimerSeq STARFusion TCGA_RNA-Seq NSA2-PCDHAC1 NSA2 chr5 74063188 + PCDHAC1 chr5 140358534 + Exonic hg19 SKCM TCGA-ER-A197-06A 4 69 In-Frame Intra-chr q13.3 q31.3 Seq+ 46245 ChimerSeq STARFusion TCGA_RNA-Seq NSA2-PCDHAC2 NSA2 chr5 74063188 + PCDHAC2 chr5 140358534 + Exonic hg19 SKCM TCGA-ER-A197-06A 4 69 In-Frame Intra-chr q13.3 q31.3 Seq+ 46246 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D2B-LUC7L2 TBC1D2B chr15 78290529 - LUC7L2 chr7 139083345 + Exonic hg19 SKCM TCGA-ER-A197-06A 6 61 Out-of-frame Inter-chr q25.1 q34 Seq+ 46247 ChimerSeq STARFusion TCGA_RNA-Seq ZEB2-AKT3 ZEB2 chr2 145182363 - AKT3 chr1 243708899 - Exonic hg19 SKCM TCGA-ER-A197-06A 11 34 Out-of-frame Inter-chr q22.3 Transcription factor AGC:Akt Oncogene Seq+ 46248 ChimerSeq STARFusion TCGA_RNA-Seq SDCCAG8-TFB2M SDCCAG8 chr1 243437958 + TFB2M chr1 246714604 - Exonic hg19 SKCM TCGA-ER-A197-06A 14 18 In-Frame Intra-chr q44 Seq+ 46249 ChimerSeq STARFusion TCGA_RNA-Seq RAP1B-SNUPN RAP1B chr12 69004823 + SNUPN chr15 75897568 - Exonic hg19 SKCM TCGA-ER-A197-06A 2 61 5'UTR-CDS Inter-chr q15 q24.2 Seq+ 46250 ChimerSeq STARFusion TCGA_RNA-Seq TJP1-SLC20A1 TJP1 chr15 30114205 - SLC20A1 chr2 113405230 + Exonic hg19 SKCM TCGA-ER-A197-06A 7 39 Out-of-frame Inter-chr q14.1 Seq+ 46251 ChimerSeq STARFusion TCGA_RNA-Seq IGFBP7-SPATA22 IGFBP7 chr4 57906990 - SPATA22 chr17 3349895 - Exonic hg19 SKCM TCGA-ER-A197-06A 11 20 In-Frame Inter-chr q12 Tumor suppressor gene p13.2 Seq+ 46252 ChimerSeq STARFusion TCGA_RNA-Seq PDGFA-OCA2 PDGFA chr7 557031 - OCA2 chr15 28277309 - Exonic hg19 SKCM TCGA-ER-A197-06A 4 34 Out-of-frame Inter-chr p22.3 q13.1 Seq+ 46253 ChimerSeq STARFusion TCGA_RNA-Seq ACVR1-CDK4 ACVR1 chr2 158732308 - CDK4 chr12 58145125 - Exonic hg19 SKCM TCGA-ER-A197-06A 6 21 5'UTR-CDS Inter-chr q24.1 q14.1 CMGC:CDK Oncogene Seq+ 46254 ChimerSeq STARFusion TCGA_RNA-Seq ACVR1-CDK4 ACVR1 chr2 158732308 - CDK4 chr12 58145519 - Exonic hg19 SKCM TCGA-ER-A197-06A 6 21 5'UTR-5'UTR Inter-chr q24.1 q14.1 CMGC:CDK Oncogene Seq+ 46255 ChimerSeq STARFusion TCGA_RNA-Seq ZEB2-AKT3 ZEB2 chr2 145187336 - AKT3 chr1 243708899 - Exonic hg19 SKCM TCGA-ER-A197-06A 2 34 Out-of-frame Inter-chr q22.3 Transcription factor AGC:Akt Oncogene Seq+ 46256 ChimerSeq STARFusion TCGA_RNA-Seq NCKAP5-ARHGAP15 NCKAP5 chr2 133971288 - ARHGAP15 chr2 144244942 + Exonic hg19 SKCM TCGA-ER-A197-06A 7 12 Out-of-frame Intra-chr q21.2 q22.2 Seq+ 46257 ChimerSeq STARFusion TCGA_RNA-Seq ARID1B-RCN2 ARID1B chr6 157150555 + RCN2 chr15 77224702 + Exonic hg19 SKCM TCGA-ER-A197-06A 2 30 In-Frame Inter-chr q25.3 Oncogene q24.3 Seq+ 46258 ChimerSeq STARFusion TCGA_RNA-Seq AKT3-PTPRR AKT3 chr1 243776973 - PTPRR chr12 71078044 - Exonic hg19 SKCM TCGA-ER-A197-06A 5 17 In-Frame Inter-chr AGC:Akt Oncogene q15 Seq+ 46259 ChimerSeq STARFusion TCGA_RNA-Seq MTMR3-MB MTMR3 chr22 30279348 + MB chr22 36013312 - Exonic hg19 SKCM TCGA-ER-A197-06A 5 13 5'UTR-5'UTR Intra-chr q12.2 q12.3 Seq+ 46260 ChimerSeq STARFusion TCGA_RNA-Seq PLD5-PLA2R1 PLD5 chr1 242687390 - PLA2R1 chr2 160806287 - Exonic hg19 SKCM TCGA-ER-A197-06A 3 18 In-Frame Inter-chr q43 q24.2 Tumor suppressor gene Seq+ 46261 ChimerSeq STARFusion TCGA_RNA-Seq PLD5-PLA2R1 PLD5 chr1 242687390 - PLA2R1 chr2 160808089 - Exonic hg19 SKCM TCGA-ER-A197-06A 3 18 Out-of-frame Inter-chr q43 q24.2 Tumor suppressor gene Seq+ 46262 ChimerSeq STARFusion TCGA_RNA-Seq ACVR1-CDK4 ACVR1 chr2 158732308 - CDK4 chr12 58144548 - Exonic hg19 SKCM TCGA-ER-A197-06A 2 21 5'UTR-CDS Inter-chr q24.1 q14.1 CMGC:CDK Oncogene Seq+ 46263 ChimerSeq STARFusion TCGA_RNA-Seq ACVR1-CDK4 ACVR1 chr2 158732308 - CDK4 chr12 58144873 - Exonic hg19 SKCM TCGA-ER-A197-06A 2 21 5'UTR-CDS Inter-chr q24.1 q14.1 CMGC:CDK Oncogene Seq+ 46264 ChimerSeq STARFusion TCGA_RNA-Seq CNST-LNX1 CNST chr1 246755243 + LNX1 chr4 54373636 - Exonic hg19 SKCM TCGA-ER-A197-06A 4 13 In-Frame Inter-chr q44 q12 Seq+ 46265 ChimerSeq STARFusion TCGA_RNA-Seq MTMR3-MB MTMR3 chr22 30279348 + MB chr22 36007153 - Exonic hg19 SKCM TCGA-ER-A197-06A 4 13 5'UTR-CDS Intra-chr q12.2 q12.3 Seq+ 46266 ChimerSeq STARFusion TCGA_RNA-Seq IGFBP7-CNST IGFBP7 chr4 57906990 - CNST chr1 246754814 + Exonic hg19 SKCM TCGA-ER-A197-06A 4 12 CDS-5'UTR Inter-chr q12 Tumor suppressor gene q44 Seq+ 46267 ChimerSeq STARFusion TCGA_RNA-Seq BNC2-C9orf92 BNC2 chr9 16727795 - C9orf92 chr9 16215897 - Exonic hg19 SKCM TCGA-ER-A197-06A 5 7 Out-of-frame Intra-chr p22.2 Transcription factor p22.3 46268 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB49-SLC23A2 ZBTB49 chr4 4292079 + SLC23A2 chr20 4951561 - Exonic hg19 SKCM TCGA-ER-A197-06A 3 7 5'UTR-5'UTR Inter-chr p16.3 Transcription factor p13 Seq+ 46269 ChimerSeq STARFusion TCGA_RNA-Seq ARID1B-SAMD5 ARID1B chr6 157150555 + SAMD5 chr6 147885530 + Exonic hg19 SKCM TCGA-ER-A197-06A 3 5 In-Frame Intra-chr q25.3 Oncogene q24.3 Seq+ 46270 ChimerSeq STARFusion TCGA_RNA-Seq ARID4B-SCCPDH ARID4B chr1 235357328 - SCCPDH chr1 246927548 + Exonic hg19 SKCM TCGA-ER-A197-06A 3 5 Out-of-frame Intra-chr q42.3 q44 Seq+ 46271 ChimerSeq STARFusion TCGA_RNA-Seq ACSF2-ABCA9 ACSF2 chr17 48503750 + ABCA9 chr17 67020494 - Exonic hg19 SKCM TCGA-ER-A197-06A 3 4 In-Frame Intra-chr q21.33 q24.2 Seq+ 46272 ChimerSeq STARFusion TCGA_RNA-Seq EFCAB2-KIF26B EFCAB2 chr1 245133745 + KIF26B chr1 245530136 + Exonic hg19 SKCM TCGA-ER-A197-06A 2 7 Out-of-frame Intra-chr q44 46273 ChimerSeq STARFusion TCGA_RNA-Seq PEMT-SCUBE1 PEMT chr17 17480234 - SCUBE1 chr22 43654341 - Exonic hg19 SKCM TCGA-ER-A197-06A 2 7 Out-of-frame Inter-chr p11.2 q13.2 Seq+ 46274 ChimerSeq STARFusion TCGA_RNA-Seq CHD2-ZNF880 CHD2 chr15 93444529 + ZNF880 chr19 52887102 + Exonic hg19 SKCM TCGA-ER-A197-06A 3 2 Out-of-frame Inter-chr q26.1 q13.41 Transcription factor Seq+ 46275 ChimerSeq STARFusion TCGA_RNA-Seq RFX3-ARID4B RFX3 chr9 3525747 - ARID4B chr1 235359430 - Exonic hg19 SKCM TCGA-ER-A197-06A 2 5 5'UTR-CDS Inter-chr p24.2 Transcription factor q42.3 Seq+ 46276 ChimerSeq STARFusion TCGA_RNA-Seq CHST12-PLA2G4E CHST12 chr7 2443280 + PLA2G4E chr15 42276817 - Exonic hg19 SKCM TCGA-ER-A197-06A 2 4 5'UTR-CDS Inter-chr p22.3 q15.1 Seq+ 46277 ChimerSeq STARFusion TCGA_RNA-Seq DGAT2-TMEM126A DGAT2 chr11 75480157 + TMEM126A chr11 85365107 + Exonic hg19 SKCM TCGA-ER-A197-06A 2 4 Out-of-frame Intra-chr q13.5 q14.1 Seq+ 46278 ChimerSeq STARFusion TCGA_RNA-Seq PTGDS-NOC4L PTGDS chr9 139872144 + NOC4L chr12 132635526 + Exonic hg19 SKCM TCGA-ER-A197-06A 2 1 Out-of-frame Inter-chr q34.3 q24.33 Seq+ 46279 ChimerSeq STARFusion TCGA_RNA-Seq DOCK4-IMMP2L DOCK4 chr7 111846157 - IMMP2L chr7 110603621 - Exonic hg19 SKCM TCGA-EE-A2M5-06A 2 1 Out-of-frame Intra-chr q31.1 q31.1 KB Pub Seq+ 46280 ChimerSeq STARFusion TCGA_RNA-Seq MED1-KRT222 MED1 chr17 37604051 - KRT222 chr17 38818296 - Exonic hg19 SKCM TCGA-ER-A2NF-01A 11 60 In-Frame Intra-chr q12 Tumor suppressor gene q21.2 Seq+ 46281 ChimerSeq STARFusion TCGA_RNA-Seq MED1-KRT222 MED1 chr17 37604051 - KRT222 chr17 38818296 - Exonic hg19 SKCM TCGA-ER-A2NF-01A 11 60 In-Frame Intra-chr q12 Tumor suppressor gene q21.2 Seq+ 46282 ChimerSeq STARFusion TCGA_RNA-Seq TYRP1-MYH10 TYRP1 chr9 12709653 + MYH10 chr17 8508282 - Exonic hg19 SKCM TCGA-ER-A2NF-01A 18 2 Out-of-frame Inter-chr p23 p13.1 46283 ChimerSeq STARFusion TCGA_RNA-Seq C1orf86-IGKC C1orf86 chr1 2135075 - IGKC chr2 89160769 - Exonic hg19 SKCM TCGA-ER-A2NF-01A 11 1 Out-of-frame Inter-chr p11.2 46284 ChimerSeq STARFusion TCGA_RNA-Seq MYO10-IGH@ MYO10 chr5 16701234 - IGH@ chr14 106330459 - Exonic hg19 SKCM TCGA-ER-A2NF-01A 9 7 Out-of-frame Inter-chr p15.1 32.33 46285 ChimerSeq STARFusion TCGA_RNA-Seq EFHD1-IGH@ EFHD1 chr2 233498037 + IGH@ chr14 106329449 - Exonic hg19 SKCM TCGA-ER-A2NF-01A 5 12 Out-of-frame Inter-chr q37.1 32.33 46286 ChimerSeq STARFusion TCGA_RNA-Seq DIP2B-BCAT1 DIP2B chr12 50899023 + BCAT1 chr12 24982831 - Exonic hg19 SKCM TCGA-ER-A193-06A 25 98 Out-of-frame Intra-chr q13.12 p12.1 Seq+ 46287 ChimerSeq STARFusion TCGA_RNA-Seq RAP1B-MDM1 RAP1B chr12 69044248 + MDM1 chr12 68707332 - Exonic hg19 SKCM TCGA-ER-A193-06A 17 122 Out-of-frame Intra-chr q15 q15 46288 ChimerSeq STARFusion TCGA_RNA-Seq TULP3-PRMT8 TULP3 chr12 3000154 + PRMT8 chr12 3677872 + Exonic hg19 SKCM TCGA-ER-A193-06A 14 45 Out-of-frame Intra-chr p13.33 p13.32 Seq+ 46289 ChimerSeq STARFusion TCGA_RNA-Seq TMEM117-UBC TMEM117 chr12 44770507 + UBC chr12 125398320 - Exonic hg19 SKCM TCGA-ER-A193-06A 5 37 CDS-5'UTR Intra-chr q12 q24.31 Seq+ 46290 ChimerSeq STARFusion TCGA_RNA-Seq ST8SIA1-AEBP2 ST8SIA1 chr12 22401940 - AEBP2 chr12 19665332 + Exonic hg19 SKCM TCGA-ER-A193-06A 7 11 Out-of-frame Intra-chr p12.1 p12.3 Transcription factor Seq+ 46291 ChimerSeq STARFusion TCGA_RNA-Seq MMP17-NOC4L MMP17 chr12 132313198 + NOC4L chr12 132635526 + Exonic hg19 SKCM TCGA-ER-A193-06A 4 1 Out-of-frame Intra-chr q24.33 q24.33 Seq+ 46292 ChimerSeq STARFusion TCGA_RNA-Seq VIM-LMNB1 VIM chr10 17271727 + LMNB1 chr5 126113336 + Exonic hg19 SKCM TCGA-ER-A193-06A 3 1 Out-of-frame Inter-chr p13 Tumor suppressor gene q23.2 46293 ChimerSeq STARFusion TCGA_RNA-Seq WDR59-KIFC3 WDR59 chr16 75018862 - KIFC3 chr16 57795083 - Exonic hg19 SKCM TCGA-EE-A2MN-06A 4 19 In-Frame Intra-chr q23.1 q21 Seq+ 46294 ChimerSeq STARFusion TCGA_RNA-Seq WDR59-KIFC3 WDR59 chr16 75018862 - KIFC3 chr16 57795448 - Exonic hg19 SKCM TCGA-EE-A2MN-06A 3 19 Out-of-frame Intra-chr q23.1 q21 Seq+ 46295 ChimerSeq STARFusion TCGA_RNA-Seq UBE2V1-PAAF1 UBE2V1 chr20 48713209 - PAAF1 chr11 73610191 + Exonic hg19 SKCM TCGA-YG-AA3P-06A 49 210 In-Frame Inter-chr q13.13 q13.4 Seq+ 46296 ChimerSeq STARFusion TCGA_RNA-Seq TMEM189-PAAF1 TMEM189 chr20 48713209 - PAAF1 chr11 73610191 + Exonic hg19 SKCM TCGA-YG-AA3P-06A 49 186 3'UTR-CDS Inter-chr q13.13 q13.4 46297 ChimerSeq STARFusion TCGA_RNA-Seq UBE2V1-PAAF1 UBE2V1 chr20 48729644 - PAAF1 chr11 73610191 + Exonic hg19 SKCM TCGA-YG-AA3P-06A 35 207 Out-of-frame Inter-chr q13.13 q13.4 Seq+ 46298 ChimerSeq STARFusion TCGA_RNA-Seq RPL7L1-UBR2 RPL7L1 chr6 42848704 + UBR2 chr6 42650793 + Exonic hg19 SKCM TCGA-YG-AA3P-06A 23 133 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 46299 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-PPP6R3 CTTN chr11 70271507 + PPP6R3 chr11 68350511 + Exonic hg19 SKCM TCGA-YG-AA3P-06A 17 98 Out-of-frame Intra-chr q13.3 q13.2 Seq+ 46300 ChimerSeq STARFusion TCGA_RNA-Seq RPL7L1-UBR2 RPL7L1 chr6 42847689 + UBR2 chr6 42650793 + Exonic hg19 SKCM TCGA-YG-AA3P-06A 3 130 In-Frame Intra-chr p21.1 p21.1 Seq+ 46301 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-PPP6R3 CTTN chr11 70269101 + PPP6R3 chr11 68350511 + Exonic hg19 SKCM TCGA-YG-AA3P-06A 4 93 In-Frame Intra-chr q13.3 q13.2 Seq+ 46302 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-ACER3 PPP6R3 chr11 68305359 + ACER3 chr11 76687333 + Exonic hg19 SKCM TCGA-YG-AA3P-06A 13 54 Out-of-frame Intra-chr q13.2 q13.5 Seq+ 46303 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-PPP6R3 CTTN chr11 70271507 + PPP6R3 chr11 68358128 + Exonic hg19 SKCM TCGA-YG-AA3P-06A 2 93 Out-of-frame Intra-chr q13.3 q13.2 Seq+ 46304 ChimerSeq STARFusion TCGA_RNA-Seq RSF1-NARS2 RSF1 chr11 77531574 - NARS2 chr11 78154804 - Exonic hg19 SKCM TCGA-YG-AA3P-06A 13 43 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 46305 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-ACER3 PPP6R3 chr11 68287119 + ACER3 chr11 76687333 + Exonic hg19 SKCM TCGA-YG-AA3P-06A 3 52 5'UTR-CDS Intra-chr q13.2 q13.5 Seq+ 46306 ChimerSeq STARFusion TCGA_RNA-Seq FAM104A-ACLY FAM104A chr17 71223304 - ACLY chr17 40058066 - Exonic hg19 SKCM TCGA-YG-AA3P-06A 11 18 In-Frame Intra-chr q25.1 q21.2 Seq+ 46307 ChimerSeq STARFusion TCGA_RNA-Seq CCND1-ANO1 CCND1 chr11 69458759 + ANO1 chr11 69924648 + Exonic hg19 SKCM TCGA-YG-AA3P-06A 10 8 CDS-5'UTR Intra-chr q13.3 Oncogene q13.3 Seq+ 46308 ChimerSeq STARFusion TCGA_RNA-Seq SPCS2-PAK1 SPCS2 chr11 74680744 + PAK1 chr11 77185714 - Exonic hg19 SKCM TCGA-YG-AA3P-06A 5 11 CDS-5'UTR Intra-chr q13.4 q14.1 STE:STE20 46309 ChimerSeq STARFusion TCGA_RNA-Seq USP35-CHRDL2 USP35 chr11 77911854 + CHRDL2 chr11 74429877 - Exonic hg19 SKCM TCGA-YG-AA3P-06A 3 18 Out-of-frame Intra-chr q14.1 q13.4 Seq+ 46310 ChimerSeq STARFusion TCGA_RNA-Seq GAB2-PTPRT GAB2 chr11 78128692 - PTPRT chr20 40828028 - Exonic hg19 SKCM TCGA-YG-AA3P-06A 5 9 Out-of-frame Inter-chr q14.1 q13.11 Oncogene Tumor suppressor gene Seq+ 46311 ChimerSeq STARFusion TCGA_RNA-Seq MRPL48-NARS2 MRPL48 chr11 73536841 + NARS2 chr11 78239982 - Exonic hg19 SKCM TCGA-YG-AA3P-06A 5 7 In-Frame Intra-chr q13.4 q14.1 Seq+ 46312 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-P4HA3 UVRAG chr11 75623083 + P4HA3 chr11 74035270 - Exonic hg19 SKCM TCGA-YG-AA3P-06A 3 15 CDS-5'UTR Intra-chr q13.5 Tumor suppressor gene q13.4 Seq+ 46313 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V0A1-STAT5B ATP6V0A1 chr17 40610981 + STAT5B chr17 40384155 - Exonic hg19 SKCM TCGA-YG-AA3P-06A 3 9 5'UTR-5'UTR Intra-chr q21.2 q21.2 Transcription factor Seq+ 46314 ChimerSeq STARFusion TCGA_RNA-Seq ARRB1-PAK1 ARRB1 chr11 75062632 - PAK1 chr11 77103586 - Exonic hg19 SKCM TCGA-YG-AA3P-06A 3 4 CDS-5'UTR Intra-chr q13.4 q14.1 STE:STE20 Seq+ 46315 ChimerSeq STARFusion TCGA_RNA-Seq PEAK1-NRG4 PEAK1 chr15 77544709 - NRG4 chr15 76235995 - Exonic hg19 SKCM TCGA-FW-A3I3-06A 24 72 5'UTR-CDS Intra-chr q24.3 q24.2 Seq+ 46316 ChimerSeq STARFusion TCGA_RNA-Seq AHCTF1-SMYD3 AHCTF1 chr1 247048795 - SMYD3 chr1 246518396 - Exonic hg19 SKCM TCGA-FW-A3I3-06A 6 70 In-Frame Intra-chr q44 Transcription factor q44 Transcription factor 46317 ChimerSeq STARFusion TCGA_RNA-Seq FBXO33-SERINC5 FBXO33 chr14 39900768 - SERINC5 chr5 79470870 - Exonic hg19 SKCM TCGA-FW-A3I3-06A 7 22 Out-of-frame Inter-chr q21.1 q14.1 Seq+ 46318 ChimerSeq STARFusion TCGA_RNA-Seq AHCTF1-SMYD3 AHCTF1 chr1 247094880 - SMYD3 chr1 246518396 - Exonic hg19 SKCM TCGA-FW-A3I3-06A 2 41 5'UTR-5'UTR Intra-chr q44 Transcription factor q44 Transcription factor 46319 ChimerSeq STARFusion TCGA_RNA-Seq NSFP1-NFE2L1 NSFP1 chr17 44564506 + NFE2L1 chr17 46133748 + Exonic hg19 SKCM TCGA-FW-A3I3-06A 8 17 5'UTR-CDS Intra-chr q21.32 Transcription factor 46320 ChimerSeq STARFusion TCGA_RNA-Seq SERINC5-MYO10 SERINC5 chr5 79498705 - MYO10 chr5 16704794 - Exonic hg19 SKCM TCGA-FW-A3I3-06A 7 12 In-Frame Intra-chr q14.1 p15.1 Seq+ 46321 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD27-RNF38 ANKRD27 chr19 33140588 - RNF38 chr9 36376124 - Exonic hg19 SKCM TCGA-FW-A3I3-06A 5 6 In-Frame Inter-chr q13.11 p13.2 Seq+ 46322 ChimerSeq STARFusion TCGA_RNA-Seq KMT2C-DPP6 KMT2C chr7 151962123 - DPP6 chr7 154667616 + Exonic hg19 SKCM TCGA-FW-A3I3-06A 2 9 Out-of-frame Intra-chr q36.1 Oncogene Tumor suppressor gene 46323 ChimerSeq STARFusion TCGA_RNA-Seq CADPS2-AASS CADPS2 chr7 122303291 - AASS chr7 121773795 - Exonic hg19 SKCM TCGA-FW-A3I3-06A 2 8 CDS-5'UTR Intra-chr q31.32 q31.32 46324 ChimerSeq STARFusion TCGA_RNA-Seq GPHN-PRKCH GPHN chr14 66975309 + PRKCH chr14 61857943 + Exonic hg19 SKCM TCGA-FW-A3I3-06A 2 7 Out-of-frame Intra-chr q23.3 q23.1 Seq+ 46325 ChimerSeq STARFusion TCGA_RNA-Seq CCDC167-RRP7A CCDC167 chr6 37467598 - RRP7A chr22 42976365 - Exonic hg19 SKCM TCGA-EB-A5UM-01A 6 24 CDS-5'UTR Inter-chr p21.2 q13.2 Seq+ 46326 ChimerSeq STARFusion TCGA_RNA-Seq CCDC167-RRP7A CCDC167 chr6 37467598 - RRP7A chr22 42912142 - Exonic hg19 SKCM TCGA-EB-A5UM-01A 5 21 In-Frame Inter-chr p21.2 q13.2 Seq+ 46327 ChimerSeq STARFusion TCGA_RNA-Seq CCDC167-RRP7A CCDC167 chr6 37467598 - RRP7A chr22 42914153 - Exonic hg19 SKCM TCGA-EB-A5UM-01A 3 21 Out-of-frame Inter-chr p21.2 q13.2 Seq+ 46328 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG3 STK25 chr2 242434915 - IGHG3 chr14 106237745 - Exonic hg19 SKCM TCGA-ER-A1A1-06A 100 1 Out-of-frame Inter-chr q37.3 46329 ChimerSeq STARFusion TCGA_RNA-Seq BANP-JPH3 BANP chr16 88052273 + JPH3 chr16 87677864 + Exonic hg19 SKCM TCGA-ER-A1A1-06A 15 24 In-Frame Intra-chr q24.2 Tumor suppressor gene q24.2 Seq+ 46330 ChimerSeq STARFusion TCGA_RNA-Seq ENO1-IGHG3 ENO1 chr1 8923986 - IGHG3 chr14 106330069 - Exonic hg19 SKCM TCGA-ER-A1A1-06A 14 1 Out-of-frame Inter-chr p36.23 46331 ChimerSeq STARFusion TCGA_RNA-Seq ENO1-IGHJ5 ENO1 chr1 8923986 - IGHJ5 chr14 106330069 - Exonic hg19 SKCM TCGA-ER-A1A1-06A 14 1 Out-of-frame Inter-chr p36.23 46332 ChimerSeq STARFusion TCGA_RNA-Seq BSG-IGHG1 BSG chr19 580394 + IGHG1 chr14 106235708 - Exonic hg19 SKCM TCGA-ER-A1A1-06A 5 3 Out-of-frame Inter-chr p13.3 q32.33 46333 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHG1 SLC7A5 chr16 87868137 - IGHG1 chr14 106209410 - Exonic hg19 SKCM TCGA-ER-A1A1-06A 4 4 Out-of-frame Inter-chr q24.2 q32.33 46334 ChimerSeq STARFusion TCGA_RNA-Seq CMSS1-LNP1 CMSS1 chr3 99536887 + LNP1 chr3 100148541 + Exonic hg19 SKCM TCGA-ER-A1A1-06A 2 9 Out-of-frame Intra-chr q12.1 q12.2 Seq+ 46335 ChimerSeq STARFusion TCGA_RNA-Seq SRBD1-C2orf91 SRBD1 chr2 45789792 - C2orf91 chr2 42165753 - Exonic hg19 SKCM TCGA-EB-A6L9-06A 16 48 Out-of-frame Intra-chr p21 p21 Seq+ 46336 ChimerSeq STARFusion TCGA_RNA-Seq SRBD1-C2orf91 SRBD1 chr2 45800346 - C2orf91 chr2 42165753 - Exonic hg19 SKCM TCGA-EB-A6L9-06A 3 48 Out-of-frame Intra-chr p21 p21 Seq+ 46337 ChimerSeq STARFusion TCGA_RNA-Seq PRKCE-GPR126 PRKCE chr2 46070202 + GPR126 chr6 142758571 + Exonic hg19 SKCM TCGA-EB-A6L9-06A 2 34 In-Frame Inter-chr p21 Tumor suppressor gene Seq+ 46338 ChimerSeq STARFusion TCGA_RNA-Seq PEX19-AIG1 PEX19 chr1 160252734 - AIG1 chr6 143486219 + Exonic hg19 SKCM TCGA-EB-A6L9-06A 6 15 Out-of-frame Inter-chr q23.2 q24.2 Seq+ 46339 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-TXLNB YWHAE chr17 1303341 - TXLNB chr6 139569046 - Exonic hg19 SKCM TCGA-EB-A6L9-06A 2 11 Out-of-frame Inter-chr p13.3 q24.1 Seq+ 46340 ChimerSeq STARFusion TCGA_RNA-Seq MMP17-NOC4L MMP17 chr12 132313198 + NOC4L chr12 132635526 + Exonic hg19 SKCM TCGA-EB-A6L9-06A 3 0 Out-of-frame Intra-chr q24.33 q24.33 Seq+ 46341 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SRSF5 IGH@ chr14 106725203 - SRSF5 chr14 70235168 + Exonic hg19 SKCM TCGA-EE-A29T-06A 10 1 Out-of-frame Intra-chr 32.33 q24.1 46342 ChimerSeq STARFusion TCGA_RNA-Seq FMN1-TRPM1 FMN1 chr15 33300215 - TRPM1 chr15 31353717 - Exonic hg19 SKCM TCGA-D9-A1JX-06A 94 497 In-Frame Intra-chr q13.3 Seq+ 46343 ChimerSeq STARFusion TCGA_RNA-Seq ZNF280B-BPIFC ZNF280B chr22 22862128 - BPIFC chr22 32843327 - Exonic hg19 SKCM TCGA-D9-A1JX-06A 8 39 5'UTR-CDS Intra-chr Transcription factor q12.3 Seq+ 46344 ChimerSeq STARFusion TCGA_RNA-Seq LOC100128675-LGI4 LOC100128675 chr19 35597133 - LGI4 chr19 35622946 - Exonic hg19 SKCM TCGA-D9-A1JX-06A 10 7 3'UTR-CDS Intra-chr q13.12 46345 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-FAM19A5 MKL1 chr22 41032482 - FAM19A5 chr22 49042409 + Exonic hg19 SKCM TCGA-D9-A1JX-06A 10 0 5'UTR-CDS Intra-chr q13.2 q13.32 Seq+ 46346 ChimerSeq STARFusion TCGA_RNA-Seq PEX26-C22orf28 PEX26 chr22 18566498 + C22orf28 chr22 32784086 - Exonic hg19 SKCM TCGA-D9-A1JX-06A 2 24 Out-of-frame Intra-chr q11.21 Seq+ 46347 ChimerSeq STARFusion TCGA_RNA-Seq PEX26-C22orf28 PEX26 chr22 18568024 + C22orf28 chr22 32784086 - Exonic hg19 SKCM TCGA-D9-A1JX-06A 2 24 Out-of-frame Intra-chr q11.21 Seq+ 46348 ChimerSeq STARFusion TCGA_RNA-Seq PEX26-C22orf28 PEX26 chr22 18562780 + C22orf28 chr22 32784086 - Exonic hg19 SKCM TCGA-D9-A1JX-06A 2 24 Out-of-frame Intra-chr q11.21 Seq+ 46349 ChimerSeq STARFusion TCGA_RNA-Seq THOC5-ISX THOC5 chr22 29924067 - ISX chr22 35462745 + Exonic hg19 SKCM TCGA-D9-A1JX-06A 5 5 CDS-5'UTR Intra-chr q12.2 q12.3 Transcription factor Seq+ 46350 ChimerSeq STARFusion TCGA_RNA-Seq KBTBD2-DPY19L1P1 KBTBD2 chr7 32931148 - DPY19L1P1 chr7 32718742 - Exonic hg19 SKCM TCGA-D9-A1JX-06A 2 2 5'UTR-3'UTR Intra-chr p14.3 p14.3 46351 ChimerSeq STARFusion TCGA_RNA-Seq ST3GAL2-IGH@ ST3GAL2 chr16 70472954 - IGH@ chr14 106330065 - Exonic hg19 SKCM TCGA-EE-A3JE-06A 10 1 Out-of-frame Inter-chr q22.1 32.33 46352 ChimerSeq STARFusion TCGA_RNA-Seq C5orf45-IGH@ C5orf45 chr5 179265254 - IGH@ chr14 106329462 - Exonic hg19 SKCM TCGA-EE-A3JE-06A 4 2 Out-of-frame Inter-chr 32.33 46353 ChimerSeq STARFusion TCGA_RNA-Seq TIMM23B-LINC00843 TIMM23B chr10 51387763 + LINC00843 chr10 51732772 + Exonic hg19 SKCM TCGA-D3-A3MV-06A 14 67 Out-of-frame Intra-chr q11.23 q11.23 46354 ChimerSeq STARFusion TCGA_RNA-Seq RIPK1-SERPINB9 RIPK1 chr6 3064293 + SERPINB9 chr6 2900855 - Exonic hg19 SKCM TCGA-D3-A3MV-06A 7 3 5'UTR-5'UTR Intra-chr p25.2 TKL:RIPK p25.2 46355 ChimerSeq STARFusion TCGA_RNA-Seq BAGE2-CTBP2P1 BAGE2 chr21 11058161 - CTBP2P1 chrY 59001440 + Exonic hg19 SKCM TCGA-D3-A3MV-06A 4 9 Out-of-frame Inter-chr p11.2 46356 ChimerSeq STARFusion TCGA_RNA-Seq MYO1D-MT4 MYO1D chr17 30932105 - MT4 chr16 56599005 + Exonic hg19 SKCM TCGA-GN-A8LK-06A 22 69 CDS-5'UTR Inter-chr q11.2 q13 Seq+ 46357 ChimerSeq STARFusion TCGA_RNA-Seq UBA52-UBBP2 UBA52 chr19 18684191 + UBBP2 chr1 218023942 - Exonic hg19 SKCM TCGA-GN-A8LK-06A 16 1 Out-of-frame Inter-chr p13.11 q41 46358 ChimerSeq STARFusion TCGA_RNA-Seq STIM1-PNPLA2 STIM1 chr11 3877639 + PNPLA2 chr11 821628 + Exonic hg19 SKCM TCGA-GN-A8LK-06A 6 23 In-Frame Intra-chr p15.4 p15.5 Seq+ 46359 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-AARS KANSL1 chr17 44143903 - AARS chr16 70295060 - Exonic hg19 SKCM TCGA-FR-A8YC-06A 6 29 In-Frame Inter-chr q22.1 Seq+ 46360 ChimerSeq STARFusion TCGA_RNA-Seq USP33-CCDC53 USP33 chr1 78177432 - CCDC53 chr12 102406970 - Exonic hg19 SKCM TCGA-ER-A2ND-06A 27 205 Out-of-frame Inter-chr p31.1 Tumor suppressor gene Seq+ 46361 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L2-USP33 NFE2L2 chr2 178199121 - USP33 chr1 78167156 - Exonic hg19 SKCM TCGA-ER-A2ND-06A 7 15 5'UTR-CDS Inter-chr q31.2 Oncogene Transcription factor p31.1 Tumor suppressor gene Seq+ 46362 ChimerSeq STARFusion TCGA_RNA-Seq KHDRBS3-PACRG KHDRBS3 chr8 136555013 + PACRG chr6 163483182 + Exonic hg19 SKCM TCGA-ER-A2ND-06A 4 24 In-Frame Inter-chr q24.23 q26 Tumor suppressor gene Seq+ 46363 ChimerSeq STARFusion TCGA_RNA-Seq PAPSS2-PTEN PAPSS2 chr10 89419765 + PTEN chr10 89685270 + Exonic hg19 SKCM TCGA-EB-A85I-01A 2 1 Out-of-frame Intra-chr q23.2 q23.31 Oncogene Tumor suppressor gene Seq+ 46364 ChimerSeq STARFusion TCGA_RNA-Seq CD74-IGH@ CD74 chr5 149781739 - IGH@ chr14 106208265 - Exonic hg19 SKCM TCGA-D3-A2JF-06A 3 47 Out-of-frame Inter-chr q33.1 32.33 46365 ChimerSeq STARFusion TCGA_RNA-Seq CD74-IGHG1 CD74 chr5 149781740 - IGHG1 chr14 106208266 - Exonic hg19 SKCM TCGA-D3-A2JF-06A 3 34 Out-of-frame Inter-chr q33.1 q32.33 46366 ChimerSeq STARFusion TCGA_RNA-Seq IL4R-NSMCE1 IL4R chr16 27325341 + NSMCE1 chr16 27246620 - Exonic hg19 SKCM TCGA-BF-A1Q0-01A 60 229 5'UTR-CDS Intra-chr p12.1 p12.1 Seq+ 46367 ChimerSeq STARFusion TCGA_RNA-Seq ATL3-ZDHHC14 ATL3 chr11 63438762 - ZDHHC14 chr6 158068291 + Exonic hg19 SKCM TCGA-BF-A1Q0-01A 23 81 Out-of-frame Inter-chr q13.1 q25.3 Seq+ 46368 ChimerSeq STARFusion TCGA_RNA-Seq CRLF3-OPA3 CRLF3 chr17 29151541 - OPA3 chr19 46057169 - Exonic hg19 SKCM TCGA-BF-A1Q0-01A 16 50 Out-of-frame Inter-chr q11.2 q13.32 Seq+ 46369 ChimerSeq STARFusion TCGA_RNA-Seq TEF-PLEKHO2 TEF chr22 41791907 + PLEKHO2 chr15 65140792 + Exonic hg19 SKCM TCGA-BF-A1Q0-01A 14 36 Out-of-frame Inter-chr q13.2 Transcription factor q22.31 Seq+ 46370 ChimerSeq STARFusion TCGA_RNA-Seq AHI1-C12orf50 AHI1 chr6 135748305 - C12orf50 chr12 88388520 - Exonic hg19 SKCM TCGA-BF-A1Q0-01A 12 20 In-Frame Inter-chr q23.3 q21.32 Seq+ 46371 ChimerSeq STARFusion TCGA_RNA-Seq NSMCE1-IL4R NSMCE1 chr16 27268756 - IL4R chr16 27367129 + Exonic hg19 SKCM TCGA-BF-A1Q0-01A 7 36 In-Frame Intra-chr p12.1 p12.1 Seq+ 46372 ChimerSeq STARFusion TCGA_RNA-Seq NSMCE1-IL4R NSMCE1 chr16 27268756 - IL4R chr16 27370237 + Exonic hg19 SKCM TCGA-BF-A1Q0-01A 2 36 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 46373 ChimerSeq STARFusion TCGA_RNA-Seq RGL1-HMCN1 RGL1 chr1 183775619 + HMCN1 chr1 185815158 + Exonic hg19 SKCM TCGA-BF-A1Q0-01A 8 11 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 46374 ChimerSeq STARFusion TCGA_RNA-Seq UTP20-ANKS1B UTP20 chr12 101711441 + ANKS1B chr12 99447087 - Exonic hg19 SKCM TCGA-BF-A1Q0-01A 3 9 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 46375 ChimerSeq STARFusion TCGA_RNA-Seq TMEM178B-NR5A2 TMEM178B chr7 140912504 + NR5A2 chr1 200080330 + Exonic hg19 SKCM TCGA-BF-A1Q0-01A 2 3 Out-of-frame Inter-chr q34 q32.1 Transcription factor Seq+ 46376 ChimerSeq STARFusion TCGA_RNA-Seq CTCF-CES2 CTCF chr16 67605167 + CES2 chr16 66971940 + Exonic hg19 SKCM TCGA-FR-A2OS-01A 5 68 5'UTR-5'UTR Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 Seq+ 46377 ChimerSeq STARFusion TCGA_RNA-Seq SCARNA17-ZC3H3 SCARNA17 chr18 47340432 + ZC3H3 chr8 144520257 - Exonic hg19 SKCM TCGA-FR-A2OS-01A 8 2 5'UTR-CDS Inter-chr q21.1 46378 ChimerSeq STARFusion TCGA_RNA-Seq TET1-DDX50 TET1 chr10 70412351 + DDX50 chr10 70670824 + Exonic hg19 SKCM TCGA-FR-A2OS-01A 5 12 Out-of-frame Intra-chr q21.3 Oncogene Transcription factor q22.1 Seq+ 46379 ChimerSeq STARFusion TCGA_RNA-Seq BAALC-UBR5 BAALC chr8 104153285 + UBR5 chr8 103285000 - Exonic hg19 SKCM TCGA-FR-A2OS-01A 6 4 Out-of-frame Intra-chr q22.3 q22.3 Oncogene Seq+ 46380 ChimerSeq STARFusion TCGA_RNA-Seq MOSPD2-PIR MOSPD2 chrX 14891880 + PIR chrX 15425672 - Exonic hg19 SKCM TCGA-FR-A2OS-01A 3 0 In-Frame Intra-chr p22.2 p22.2 46381 ChimerSeq STARFusion TCGA_RNA-Seq UBAC2-TSC22D1 UBAC2 chr13 99970323 + TSC22D1 chr13 45010231 - Exonic hg19 SKCM TCGA-FR-A2OS-01A 2 1 Out-of-frame Intra-chr q32.3 q14.11 Tumor suppressor gene Transcription factor 46382 ChimerSeq STARFusion TCGA_RNA-Seq SLC27A1-RASGRP4 SLC27A1 chr19 17581516 + RASGRP4 chr19 38910902 - Exonic hg19 SKCM TCGA-ER-A19M-06A 2 13 In-Frame Intra-chr p13.11 q13.2 Seq+ 46383 ChimerSeq STARFusion TCGA_RNA-Seq RHOA-NICN1 RHOA chr3 49449253 - NICN1 chr3 49463861 - Exonic hg19 SKCM TCGA-ER-A19M-06A 3 2 5'UTR-CDS Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Seq+ 46384 ChimerSeq STARFusion TCGA_RNA-Seq EPS15L1-ZNF568 EPS15L1 chr19 16524584 - ZNF568 chr19 37413488 + Exonic hg19 SKCM TCGA-ER-A19M-06A 2 4 CDS-5'UTR Intra-chr p13.11 q13.12 Transcription factor Seq+ 46385 ChimerSeq STARFusion TCGA_RNA-Seq SEC11A-VPS33B SEC11A chr15 85259256 - VPS33B chr15 91546361 - Exonic hg19 SKCM TCGA-DA-A1HW-06A 126 632 Out-of-frame Intra-chr q25.3 q26.1 Seq+ 46386 ChimerSeq STARFusion TCGA_RNA-Seq SPTY2D1-SERGEF SPTY2D1 chr11 18655745 - SERGEF chr11 17809960 - Exonic hg19 SKCM TCGA-DA-A1HW-06A 25 117 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 46387 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-RPL24 IGH@ chr14 107012936 - RPL24 chr3 101400003 - Exonic hg19 SKCM TCGA-DA-A1HW-06A 43 1 Out-of-frame Inter-chr 32.33 q12.3 46388 ChimerSeq STARFusion TCGA_RNA-Seq SPTY2D1-SERGEF SPTY2D1 chr11 18656236 - SERGEF chr11 17809959 - Exonic hg19 SKCM TCGA-DA-A1HW-06A 3 117 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 46389 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-NDUFA13 IGH@ chr14 106725201 - NDUFA13 chr19 19627082 + Exonic hg19 SKCM TCGA-DA-A1HW-06A 22 1 Out-of-frame Inter-chr 32.33 p13.11 46390 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-YJEFN3 IGH@ chr14 106725201 - YJEFN3 chr19 19627082 + Exonic hg19 SKCM TCGA-DA-A1HW-06A 22 1 Out-of-frame Inter-chr 32.33 p13.11 46391 ChimerSeq STARFusion TCGA_RNA-Seq PDE8A-SLCO3A1 PDE8A chr15 85525579 + SLCO3A1 chr15 92638111 + Exonic hg19 SKCM TCGA-DA-A1HW-06A 13 25 Out-of-frame Intra-chr q25.3 q26.1 Seq+ 46392 ChimerSeq STARFusion TCGA_RNA-Seq FBXL19-ZNF720 FBXL19 chr16 30941905 + ZNF720 chr16 31803951 + Exonic hg19 SKCM TCGA-DA-A1HW-06A 7 13 CDS-3'UTR Intra-chr p11.2 Transcription factor p11.2 Seq+ 46393 ChimerSeq STARFusion TCGA_RNA-Seq VPS13C-LINC00593 VPS13C chr15 62219290 - LINC00593 chr15 70133085 + Exonic hg19 SKCM TCGA-DA-A1HW-06A 5 21 CDS-5'UTR Intra-chr q22.2 q23 46394 ChimerSeq STARFusion TCGA_RNA-Seq SERGEF-KCNC1 SERGEF chr11 17981017 - KCNC1 chr11 17793212 + Exonic hg19 SKCM TCGA-DA-A1HW-06A 6 12 In-Frame Intra-chr p15.1 p15.1 Seq+ 46395 ChimerSeq STARFusion TCGA_RNA-Seq NAALADL2-VPS13C NAALADL2 chr3 174158822 + VPS13C chr15 62306191 - Exonic hg19 SKCM TCGA-DA-A1HW-06A 3 17 5'UTR-CDS Inter-chr q26.31 q22.2 Seq+ 46396 ChimerSeq STARFusion TCGA_RNA-Seq SETD1A-TP53TG3 SETD1A chr16 30983040 + TP53TG3 chr16 32685885 - Exonic hg19 SKCM TCGA-DA-A1HW-06A 4 12 Out-of-frame Intra-chr p11.2 p11.2 46397 ChimerSeq STARFusion TCGA_RNA-Seq NAALADL2-VPS13C NAALADL2 chr3 174177102 + VPS13C chr15 62306191 - Exonic hg19 SKCM TCGA-DA-A1HW-06A 3 15 5'UTR-CDS Inter-chr q26.31 q22.2 Seq+ 46398 ChimerSeq STARFusion TCGA_RNA-Seq TNRC18-HDAC9 TNRC18 chr7 5401528 - HDAC9 chr7 18365135 + Exonic hg19 SKCM TCGA-DA-A1HW-06A 2 11 CDS-5'UTR Intra-chr p22.1 p21.1 Seq+ 46399 ChimerSeq STARFusion TCGA_RNA-Seq ABCC4-PTPN4 ABCC4 chr13 95953495 - PTPN4 chr2 120684174 + Exonic hg19 SKCM TCGA-DA-A1HW-06A 2 10 In-Frame Inter-chr q32.1 q14.2 Seq+ 46400 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL5-SLC22A18AS OSBPL5 chr11 3186446 - SLC22A18AS chr11 2909865 - Exonic hg19 SKCM TCGA-EE-A20C-06A 7 13 5'UTR-CDS Intra-chr p15.4 Seq+ 46401 ChimerSeq STARFusion TCGA_RNA-Seq STXBP5-SAMD5 STXBP5 chr6 147637543 + SAMD5 chr6 147885530 + Exonic hg19 SKCM TCGA-OD-A75X-06A 35 237 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 46402 ChimerSeq STARFusion TCGA_RNA-Seq STXBP5-SAMD5 STXBP5 chr6 147646220 + SAMD5 chr6 147885530 + Exonic hg19 SKCM TCGA-OD-A75X-06A 7 236 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 46403 ChimerSeq STARFusion TCGA_RNA-Seq DLEU2-CAB39L DLEU2 chr13 50699438 - CAB39L chr13 49918374 - Exonic hg19 SKCM TCGA-OD-A75X-06A 11 35 3'UTR-CDS Intra-chr q14.2 Tumor suppressor gene q14.2 Seq+ 46404 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF3-MYH9 ZNRF3 chr22 29280054 + MYH9 chr22 36693060 - Exonic hg19 SKCM TCGA-OD-A75X-06A 4 5 Out-of-frame Intra-chr q12.1 q12.3 Oncogene Tumor suppressor gene Seq+ 46405 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242532 + KRT14 chr17 39768618 - Exonic hg19 SKCM TCGA-ER-A2NB-01A 7 12 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 46406 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242522 + KRT14 chr17 39742780 - Exonic hg19 SKCM TCGA-ER-A2NB-01A 6 10 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 46407 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT14 EGFR chr7 55242532 + KRT14 chr17 39742770 - Exonic hg19 SKCM TCGA-ER-A2NB-01A 3 10 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 46408 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-PIP5K1P1 KCTD20 chr6 36457999 + PIP5K1P1 chr6 7987766 + Exonic hg19 SKCM TCGA-EE-A29Q-06A 14 0 Out-of-frame Intra-chr p21.31 p24.3 46409 ChimerSeq STARFusion TCGA_RNA-Seq PSAP-APOL6 PSAP chr10 73585594 - APOL6 chr22 36063725 + Exonic hg19 SKCM TCGA-EE-A29Q-06A 4 2 CDS-3'UTR Inter-chr q22.1 q12.3 46410 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 SKCM TCGA-EE-A29Q-06A 2 0 In-Frame Intra-chr p11.21 p11.21 46411 ChimerSeq STARFusion TCGA_RNA-Seq CLCN6-RAF1 CLCN6 chr1 11867247 + RAF1 chr3 12641914 - Exonic hg19 SKCM TCGA-ER-A19L-06A 30 98 In-Frame Inter-chr p36.22 p25.2 TKL:RAF Oncogene Seq+ 46412 ChimerSeq STARFusion TCGA_RNA-Seq SNX5-PCSK2 SNX5 chr20 17933231 - PCSK2 chr20 17338972 + Exonic hg19 SKCM TCGA-ER-A19L-06A 23 109 In-Frame Intra-chr p11.23 p12.1 Seq+ 46413 ChimerSeq STARFusion TCGA_RNA-Seq DLEU2-LINC00462 DLEU2 chr13 50699438 - LINC00462 chr13 49151995 - Exonic hg19 SKCM TCGA-ER-A19L-06A 9 32 Out-of-frame Intra-chr q14.2 Tumor suppressor gene q14.2 46414 ChimerSeq STARFusion TCGA_RNA-Seq RPS19-CEACAM6 RPS19 chr19 42365281 + CEACAM6 chr19 42274707 + Exonic hg19 SKCM TCGA-ER-A19L-06A 5 27 CDS-3'UTR Intra-chr q13.2 q13.2 46415 ChimerSeq STARFusion TCGA_RNA-Seq COL22A1-FAM135B COL22A1 chr8 139635975 - FAM135B chr8 139323163 - Exonic hg19 SKCM TCGA-ER-A19L-06A 4 8 Out-of-frame Intra-chr q24.3 q24.23 46416 ChimerSeq STARFusion TCGA_RNA-Seq ZNF79-SLC2A8 ZNF79 chr9 130198282 + SLC2A8 chr9 130162186 + Exonic hg19 SKCM TCGA-ER-A19L-06A 4 7 Out-of-frame Intra-chr q33.3 Transcription factor q33.3 Seq+ 46417 ChimerSeq STARFusion TCGA_RNA-Seq C22orf28-LOC284865 C22orf28 chr22 32808051 - LOC284865 chr22 20186774 - Exonic hg19 SKCM TCGA-FR-A8YD-06A 2 3 CDS-3'UTR Intra-chr 46418 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC21-PHGDH ZDHHC21 chr9 14639894 - PHGDH chr1 120277257 + Exonic hg19 SKCM TCGA-DA-A3F3-06A 26 115 In-Frame Inter-chr p22.3 p12 Seq+ 46419 ChimerSeq STARFusion TCGA_RNA-Seq COL4A3BP-ELOVL7 COL4A3BP chr5 74801807 - ELOVL7 chr5 60083258 - Exonic hg19 SKCM TCGA-DA-A3F3-06A 19 28 CDS-5'UTR Intra-chr q13.3 q12.1 Seq+ 46420 ChimerSeq STARFusion TCGA_RNA-Seq RECK-ACER3 RECK chr9 36052320 + ACER3 chr11 76687333 + Exonic hg19 SKCM TCGA-DA-A3F3-06A 10 64 In-Frame Inter-chr p13.3 Tumor suppressor gene q13.5 Seq+ 46421 ChimerSeq STARFusion TCGA_RNA-Seq NDUFS4-HMGCR NDUFS4 chr5 52954454 + HMGCR chr5 74638408 + Exonic hg19 SKCM TCGA-DA-A3F3-06A 5 26 CDS-5'UTR Intra-chr q11.2 q13.3 Seq+ 46422 ChimerSeq STARFusion TCGA_RNA-Seq TOMM20-LOC493754 TOMM20 chr1 235291913 - LOC493754 chr7 66019143 - Exonic hg19 SKCM TCGA-DA-A3F3-06A 4 7 Out-of-frame Inter-chr q42.3 46423 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-TSKU PPFIA1 chr11 70202360 + TSKU chr11 76506653 + Exonic hg19 SKCM TCGA-DA-A3F3-06A 2 12 5'UTR-5'UTR Intra-chr q13.3 q13.5 Seq+ 46424 ChimerSeq STARFusion TCGA_RNA-Seq MMP17-NOC4L MMP17 chr12 132313198 + NOC4L chr12 132635526 + Exonic hg19 SKCM TCGA-DA-A1I5-06A 2 0 Out-of-frame Intra-chr q24.33 q24.33 Seq+ 46425 ChimerSeq STARFusion TCGA_RNA-Seq EXT2-ALKBH3 EXT2 chr11 44135851 + ALKBH3 chr11 43940588 + Exonic hg19 SKCM TCGA-ER-A194-01A 2 36 Out-of-frame Intra-chr p11.2 Oncogene Tumor suppressor gene p11.2 Seq+ 46426 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-PMEL RNA45S5 chrUn_gl000220 115189 + PMEL chr12 56351153 - Exonic hg19 SKCM TCGA-ER-A194-01A 3 30 Out-of-frame Inter-chr q13.2 46427 ChimerSeq STARFusion TCGA_RNA-Seq PAX3-FARSB PAX3 chr2 223084859 - FARSB chr2 223464802 - Exonic hg19 SKCM TCGA-ER-A194-01A 2 2 Out-of-frame Intra-chr q36.1 Oncogene Transcription factor q36.1 46428 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-PIP5K1P1 KCTD20 chr6 36457998 + PIP5K1P1 chr6 7987765 + Exonic hg19 SKCM TCGA-FS-A4F5-06A 20 0 Out-of-frame Intra-chr p21.31 p24.3 46429 ChimerSeq STARFusion TCGA_RNA-Seq SPAG9-RDX SPAG9 chr17 49156945 - RDX chr11 110102758 - Exonic hg19 SKCM TCGA-ER-A19N-06A 75 201 Out-of-frame Inter-chr q21.33 q22.3 Seq+ 46430 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-C2orf69 IGL@ chr22 23063639 + C2orf69 chr2 200820218 + Exonic hg19 SKCM TCGA-ER-A19N-06A 45 1 Out-of-frame Inter-chr q11.22 q33.1 46431 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CDK13 IGH@ chr14 106552285 - CDK13 chr7 39990637 + Exonic hg19 SKCM TCGA-ER-A19N-06A 18 2 Out-of-frame Inter-chr 32.33 p14.1 46432 ChimerSeq STARFusion TCGA_RNA-Seq FAM195B-P4HB FAM195B chr17 79783661 - P4HB chr17 79803867 - Exonic hg19 SKCM TCGA-ER-A19N-06A 8 22 5'UTR-CDS Intra-chr q25.3 Seq+ 46433 ChimerSeq STARFusion TCGA_RNA-Seq FAM195B-P4HB FAM195B chr17 79783420 - P4HB chr17 79804415 - Exonic hg19 SKCM TCGA-ER-A19N-06A 3 22 Out-of-frame Intra-chr q25.3 Seq+ 46434 ChimerSeq STARFusion TCGA_RNA-Seq FAM195B-P4HB FAM195B chr17 79791114 - P4HB chr17 79803867 - Exonic hg19 SKCM TCGA-ER-A19N-06A 3 22 5'UTR-CDS Intra-chr q25.3 Seq+ 46435 ChimerSeq STARFusion TCGA_RNA-Seq FAM195B-P4HB FAM195B chr17 79791114 - P4HB chr17 79803618 - Exonic hg19 SKCM TCGA-ER-A19N-06A 2 22 5'UTR-CDS Intra-chr q25.3 Seq+ 46436 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-HSP90AB1 IGH@ chr14 106090975 - HSP90AB1 chr6 44220948 + Exonic hg19 SKCM TCGA-ER-A19N-06A 3 18 Out-of-frame Inter-chr 32.33 p21.1 Oncogene 46437 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-HSP90AB1 IGHG1 chr14 106207972 - HSP90AB1 chr6 44220948 + Exonic hg19 SKCM TCGA-ER-A19N-06A 3 8 Out-of-frame Inter-chr q32.33 p21.1 Oncogene Seq+ 46438 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-PIP5K1P1 KCTD20 chr6 36457998 + PIP5K1P1 chr6 7987765 + Exonic hg19 SKCM TCGA-D9-A6EG-06A 17 0 Out-of-frame Intra-chr p21.31 p24.3 46439 ChimerSeq STARFusion TCGA_RNA-Seq MED1-KRT222 MED1 chr17 37604051 - KRT222 chr17 38818296 - Exonic hg19 SKCM TCGA-ER-A2NF-06A 20 79 In-Frame Intra-chr q12 Tumor suppressor gene q21.2 Seq+ 46440 ChimerSeq STARFusion TCGA_RNA-Seq ZNF691-MAST2 ZNF691 chr1 43312328 + MAST2 chr1 46425058 + Exonic hg19 SKCM TCGA-YD-A9TA-06A 5 7 5'UTR-CDS Intra-chr p34.2 Transcription factor p34.1 AGC:MAST Seq+ 46441 ChimerSeq STARFusion TCGA_RNA-Seq ROCK1-MAP1B ROCK1 chr18 18546878 - MAP1B chr5 71479570 + Exonic hg19 SKCM TCGA-YD-A9TA-06A 2 14 In-Frame Inter-chr q11.1 AGC:DMPK q13.2 Seq+ 46442 ChimerSeq STARFusion TCGA_RNA-Seq PPIH-CCDC30 PPIH chr1 43133111 + CCDC30 chr1 43047031 + Exonic hg19 SKCM TCGA-YD-A9TA-06A 2 10 3'UTR-CDS Intra-chr p34.2 p34.2 Seq+ 46443 ChimerSeq STARFusion TCGA_RNA-Seq CNPY2-IGH@ CNPY2 chr12 56709863 - IGH@ chr14 106351914 - Exonic hg19 SKCM TCGA-ER-A19P-06A 115 1 Out-of-frame Inter-chr q13.3 32.33 46444 ChimerSeq STARFusion TCGA_RNA-Seq CNPY2-IGHG3 CNPY2 chr12 56709863 - IGHG3 chr14 106351914 - Exonic hg19 SKCM TCGA-ER-A19P-06A 109 1 Out-of-frame Inter-chr q13.3 46445 ChimerSeq STARFusion TCGA_RNA-Seq CCDC88B-IGKC CCDC88B chr11 64108401 + IGKC chr2 89161068 - Exonic hg19 SKCM TCGA-ER-A19P-06A 13 1 Out-of-frame Inter-chr q13.1 p11.2 46446 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-NOTCH1 IGHG1 chr14 106134590 - NOTCH1 chr9 139403428 - Exonic hg19 SKCM TCGA-ER-A19P-06A 10 1 Out-of-frame Inter-chr q32.33 q34.3 Oncogene Tumor suppressor gene 46447 ChimerSeq STARFusion TCGA_RNA-Seq MSRA-CSGALNACT1 MSRA chr8 10177499 + CSGALNACT1 chr8 19266205 - Exonic hg19 SKCM TCGA-EB-A3XF-01A 7 17 In-Frame Intra-chr p23.1 p21.3 Seq+ 46448 ChimerSeq STARFusion TCGA_RNA-Seq NRXN2-APOE NRXN2 chr11 64391039 - APOE chr19 45411017 + Exonic hg19 SKCM TCGA-EB-A3XF-01A 6 1 Out-of-frame Inter-chr q13.1 q13.32 46449 ChimerSeq STARFusion TCGA_RNA-Seq HMGXB4-MGMT HMGXB4 chr22 35653550 + MGMT chr10 131506159 + Exonic hg19 SKCM TCGA-W3-AA1R-06A 136 203 5'UTR-CDS Inter-chr q12.3 q26.3 Seq+ 46450 ChimerSeq STARFusion TCGA_RNA-Seq HMGXB4-MGMT HMGXB4 chr22 35653550 + MGMT chr10 131445026 + Exonic hg19 SKCM TCGA-W3-AA1R-06A 20 200 5'UTR-CDS Inter-chr q12.3 q26.3 Seq+ 46451 ChimerSeq STARFusion TCGA_RNA-Seq PELI2-GPHN PELI2 chr14 56645182 + GPHN chr14 67490350 + Exonic hg19 SKCM TCGA-W3-AA1R-06A 30 87 In-Frame Intra-chr q22.3 q23.3 Seq+ 46452 ChimerSeq STARFusion TCGA_RNA-Seq CMTM8-RPN1 CMTM8 chr3 32280611 + RPN1 chr3 128345675 - Exonic hg19 SKCM TCGA-W3-AA1R-06A 20 50 Out-of-frame Intra-chr p22.3 q21.3 Seq+ 46453 ChimerSeq STARFusion TCGA_RNA-Seq RPN1-SLC22A13 RPN1 chr3 128348794 - SLC22A13 chr3 38307485 + Exonic hg19 SKCM TCGA-W3-AA1R-06A 3 6 Out-of-frame Intra-chr q21.3 p22.2 Seq+ 46454 ChimerSeq STARFusion TCGA_RNA-Seq PRH2-PRB3 PRH2 chr12 11083679 + PRB3 chr12 11418962 - Exonic hg19 SKCM TCGA-3N-A9WD-06A 4 70 3'UTR-3'UTR Intra-chr p13.2 46455 ChimerSeq STARFusion TCGA_RNA-Seq TTYH3-MAD1L1 TTYH3 chr7 2671912 + MAD1L1 chr7 1938026 - Exonic hg19 SKCM TCGA-3N-A9WD-06A 2 9 Out-of-frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 46456 ChimerSeq STARFusion TCGA_RNA-Seq C2CD3-PC C2CD3 chr11 73872444 - PC chr11 66639630 - Exonic hg19 SKCM TCGA-XV-A9W5-01A 2 11 CDS-5'UTR Intra-chr q13.4 q13.2 Seq+ 46457 ChimerSeq STARFusion TCGA_RNA-Seq DNMT3A-DTNB DNMT3A chr2 25564695 - DTNB chr2 25602192 - Exonic hg19 SKCM TCGA-D3-A3C7-06A 19 29 5'UTR-CDS Intra-chr p23.3 Oncogene Tumor suppressor gene p23.3 Seq+ 46458 ChimerSeq STARFusion TCGA_RNA-Seq DNMT3A-DTNB DNMT3A chr2 25564695 - DTNB chr2 25606758 - Exonic hg19 SKCM TCGA-D3-A3C7-06A 7 29 5'UTR-CDS Intra-chr p23.3 Oncogene Tumor suppressor gene p23.3 Seq+ 46459 ChimerSeq STARFusion TCGA_RNA-Seq DNMT3A-DTNB DNMT3A chr2 25565299 - DTNB chr2 25602192 - Exonic hg19 SKCM TCGA-D3-A3C7-06A 3 29 5'UTR-CDS Intra-chr p23.3 Oncogene Tumor suppressor gene p23.3 Seq+ 46460 ChimerSeq STARFusion TCGA_RNA-Seq DNMT3A-DTNB DNMT3A chr2 25565299 - DTNB chr2 25606758 - Exonic hg19 SKCM TCGA-D3-A3C7-06A 2 29 5'UTR-CDS Intra-chr p23.3 Oncogene Tumor suppressor gene p23.3 Seq+ 46461 ChimerSeq STARFusion TCGA_RNA-Seq USP13-KCNMB2 USP13 chr3 179460138 + KCNMB2 chr3 178560441 + Exonic hg19 SKCM TCGA-D3-A51G-06A 310 1054 Out-of-frame Intra-chr q26.33 q26.32 Seq+ 46462 ChimerSeq STARFusion TCGA_RNA-Seq MBOAT1-F13A1 MBOAT1 chr6 20113107 - F13A1 chr6 6225093 - Exonic hg19 SKCM TCGA-D3-A51G-06A 2 4 In-Frame Intra-chr p22.3 p25.1 Seq+ 46463 ChimerSeq STARFusion TCGA_RNA-Seq LMBR1-KIAA0825 LMBR1 chr7 156589083 - KIAA0825 chr5 93872832 - Exonic hg19 SKCM TCGA-EE-A3AG-06A 2 8 CDS-5'UTR Inter-chr q36.3 q15 Seq+ 46464 ChimerSeq STARFusion TCGA_RNA-Seq CCDC90B-DLG2 CCDC90B chr11 82996916 - DLG2 chr11 83585531 - Exonic hg19 SKCM TCGA-EE-A3AG-06A 2 4 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 46465 ChimerSeq STARFusion TCGA_RNA-Seq HEATR5B-NCALD HEATR5B chr2 37280645 - NCALD chr8 102705124 - Exonic hg19 SKCM TCGA-EE-A3AG-06A 2 4 In-Frame Inter-chr p22.2 q22.3 Seq+ 46466 ChimerSeq STARFusion TCGA_RNA-Seq GIT2-SMYD5 GIT2 chr12 110429432 - SMYD5 chr2 73445989 + Exonic hg19 SKCM TCGA-FW-A3TV-06A 5 58 In-Frame Inter-chr q24.11 p13.2 Seq+ 46467 ChimerSeq STARFusion TCGA_RNA-Seq TAF3-SVIL TAF3 chr10 7866523 + SVIL chr10 29858241 - Exonic hg19 SKCM TCGA-FW-A3TV-06A 6 26 CDS-5'UTR Intra-chr p14 p11.23 Seq+ 46468 ChimerSeq STARFusion TCGA_RNA-Seq HCG4P5-APOD HCG4P5 chr6 29910702 - APOD chr3 195306348 - Exonic hg19 SKCM TCGA-FW-A3TV-06A 3 8 Out-of-frame Inter-chr q29 Seq+ 46469 ChimerSeq STARFusion TCGA_RNA-Seq TYR-MMP20 TYR chr11 88924586 + MMP20 chr11 102480761 - Exonic hg19 SKCM TCGA-EB-A57M-01A 24 195 In-Frame Intra-chr q14.3 q22.2 Seq+ 46470 ChimerSeq STARFusion TCGA_RNA-Seq TYR-MMP20 TYR chr11 88924586 + MMP20 chr11 102482634 - Exonic hg19 SKCM TCGA-EB-A57M-01A 7 193 Out-of-frame Intra-chr q14.3 q22.2 Seq+ 46471 ChimerSeq STARFusion TCGA_RNA-Seq RSF1-INTS4 RSF1 chr11 77531574 - INTS4 chr11 77594998 - Exonic hg19 SKCM TCGA-EB-A57M-01A 2 24 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 46472 ChimerSeq STARFusion TCGA_RNA-Seq C1orf198-AGT C1orf198 chr1 230979100 - AGT chr1 230846599 - Exonic hg19 SKCM TCGA-EB-A57M-01A 2 9 CDS-5'UTR Intra-chr q42.2 q42.2 Seq+ 46473 ChimerSeq STARFusion TCGA_RNA-Seq LRP5-UVRAG LRP5 chr11 68207384 + UVRAG chr11 75776754 + Exonic hg19 SKCM TCGA-EB-A57M-01A 3 5 Out-of-frame Intra-chr q13.2 q13.5 Tumor suppressor gene Seq+ 46474 ChimerSeq STARFusion TCGA_RNA-Seq DYNC2H1-NARS2 DYNC2H1 chr11 102988592 + NARS2 chr11 78239982 - Exonic hg19 SKCM TCGA-EB-A57M-01A 2 8 In-Frame Intra-chr q22.3 q14.1 Seq+ 46475 ChimerSeq STARFusion TCGA_RNA-Seq RPS8-KIF2C RPS8 chr1 45244349 + KIF2C chr1 45232498 + Exonic hg19 SKCM TCGA-D3-A5GT-01A 3 7 3'UTR-CDS Intra-chr p34.1 p34.1 46476 ChimerSeq STARFusion TCGA_RNA-Seq GARS-HOXA13 GARS chr7 30651861 + HOXA13 chr7 27238061 - Exonic hg19 SKCM TCGA-3N-A9WB-06A 5 33 Out-of-frame Intra-chr p14.3 p15.2 Transcription factor Seq+ 46477 ChimerSeq STARFusion TCGA_RNA-Seq SRGAP2B-NTNG1 SRGAP2B chr1 144053668 + NTNG1 chr1 107866904 + Exonic hg19 SKCM TCGA-3N-A9WB-06A 5 11 Out-of-frame Intra-chr q21.1 p13.3 46478 ChimerSeq STARFusion TCGA_RNA-Seq SMCR8-IGH@ SMCR8 chr17 18218988 + IGH@ chr14 106330465 - Exonic hg19 SKCM TCGA-HR-A2OH-06A 170 1 Out-of-frame Inter-chr 32.33 46479 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-PPP4R1 IGH@ chr14 106539076 - PPP4R1 chr18 9595146 - Exonic hg19 SKCM TCGA-D9-A3Z1-06A 131 1 Out-of-frame Inter-chr 32.33 p11.22 46480 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-PPP4R1 IGH@ chr14 106478107 - PPP4R1 chr18 9595146 - Exonic hg19 SKCM TCGA-D9-A3Z1-06A 128 1 Out-of-frame Inter-chr 32.33 p11.22 46481 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-PPP4R1 IGH@ chr14 106452668 - PPP4R1 chr18 9595146 - Exonic hg19 SKCM TCGA-D9-A3Z1-06A 122 1 Out-of-frame Inter-chr 32.33 p11.22 46482 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SESTD1 IGH@ chr14 107218673 - SESTD1 chr2 179967694 - Exonic hg19 SKCM TCGA-D9-A3Z1-06A 72 1 Out-of-frame Inter-chr 32.33 q31.2 46483 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-PPP4R1 IGH@ chr14 106518400 - PPP4R1 chr18 9595149 - Exonic hg19 SKCM TCGA-D9-A3Z1-06A 56 1 Out-of-frame Inter-chr 32.33 p11.22 46484 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SESTD1 IGH@ chr14 107131030 - SESTD1 chr2 179967694 - Exonic hg19 SKCM TCGA-D9-A3Z1-06A 45 1 Out-of-frame Inter-chr 32.33 q31.2 46485 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-IGL@ SSH2 chr17 27958782 - IGL@ chr22 23235961 + Exonic hg19 SKCM TCGA-D9-A3Z1-06A 9 1 Out-of-frame Inter-chr q11.2 q11.22 46486 ChimerSeq STARFusion TCGA_RNA-Seq YTHDF1-LOC100507412 YTHDF1 chr20 61845216 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 SKCM TCGA-EB-A5VU-01A 398 2297 CDS-5'UTR Inter-chr q13.33 46487 ChimerSeq STARFusion TCGA_RNA-Seq PPP1CC-DDX11L2 PPP1CC chr12 111180458 - DDX11L2 chr2 114359006 - Exonic hg19 SKCM TCGA-EB-A5VU-01A 27 60 CDS-3'UTR Inter-chr q24.11 q14.1 46488 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D15-RAB21 TBC1D15 chr12 72274387 + RAB21 chr12 72175811 + Exonic hg19 SKCM TCGA-EB-A5VU-01A 7 30 In-Frame Intra-chr q21.1 q21.1 46489 ChimerSeq STARFusion TCGA_RNA-Seq PREX1-LOC100507412 PREX1 chr20 47444179 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 SKCM TCGA-EB-A5VU-01A 7 19 CDS-5'UTR Inter-chr q13.13 46490 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D15-RAB21 TBC1D15 chr12 72278801 + RAB21 chr12 72175811 + Exonic hg19 SKCM TCGA-EB-A5VU-01A 4 30 Out-of-frame Intra-chr q21.1 q21.1 46491 ChimerSeq STARFusion TCGA_RNA-Seq RTF1-JMJD7 RTF1 chr15 41709511 + JMJD7 chr15 42126938 + Exonic hg19 SKCM TCGA-EB-A5VU-01A 4 24 Out-of-frame Intra-chr q15.1 q15.1 Seq+ 46492 ChimerSeq STARFusion TCGA_RNA-Seq PPP1CC-DDX11L9 PPP1CC chr12 111180458 - DDX11L9 chr15 102519160 - Exonic hg19 SKCM TCGA-EB-A5VU-01A 4 6 CDS-3'UTR Inter-chr q24.11 q26.3 46493 ChimerSeq STARFusion TCGA_RNA-Seq PPP1CC-DDX11L1 PPP1CC chr12 111180458 - DDX11L1 chr1 12010 + Exonic hg19 SKCM TCGA-EB-A5VU-01A 5 1 CDS-3'UTR Inter-chr q24.11 p36.33 46494 ChimerSeq STARFusion TCGA_RNA-Seq DDX27-ATP9A DDX27 chr20 47836078 + ATP9A chr20 50286648 - Exonic hg19 SKCM TCGA-EB-A5VU-01A 2 12 Out-of-frame Intra-chr q13.13 q13.2 Seq+ 46495 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 SKCM TCGA-EB-A5VU-01A 3 1 In-Frame Intra-chr p11.21 p11.21 46496 ChimerSeq STARFusion TCGA_RNA-Seq ING4-A2ML1 ING4 chr12 6772231 - A2ML1 chr12 9027021 + Exonic hg19 SKCM TCGA-D3-A3CC-06A 253 45 Out-of-frame Intra-chr p13.31 Oncogene Tumor suppressor gene p13.31 Seq+ 46497 ChimerSeq STARFusion TCGA_RNA-Seq RPL23AP79-PEPD RPL23AP79 chr19 59086955 + PEPD chr19 33904549 - Exonic hg19 SKCM TCGA-D3-A3CC-06A 38 192 Out-of-frame Intra-chr q13.11 46498 ChimerSeq STARFusion TCGA_RNA-Seq USP9X-RBBP7 USP9X chrX 40945362 + RBBP7 chrX 16881223 - Exonic hg19 SKCM TCGA-D3-A3CC-06A 30 95 5'UTR-CDS Intra-chr p11.4 Oncogene p22.2 Tumor suppressor gene Seq+ 46499 ChimerSeq STARFusion TCGA_RNA-Seq ABR-NXN ABR chr17 953290 - NXN chr17 729318 - Exonic hg19 SKCM TCGA-D3-A3CC-06A 25 102 In-Frame Intra-chr p13.3 p13.3 46500 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1551-A2ML1 KIAA1551 chr12 32113805 + A2ML1 chr12 9004380 + Exonic hg19 SKCM TCGA-D3-A3CC-06A 27 60 Out-of-frame Intra-chr p11.21 p13.31 Seq+ 46501 ChimerSeq STARFusion TCGA_RNA-Seq USP9X-RBBP7 USP9X chrX 40945362 + RBBP7 chrX 16887343 - Exonic hg19 SKCM TCGA-D3-A3CC-06A 9 95 5'UTR-CDS Intra-chr p11.4 Oncogene p22.2 Tumor suppressor gene Seq+ 46502 ChimerSeq STARFusion TCGA_RNA-Seq USP9X-RBBP7 USP9X chrX 40945362 + RBBP7 chrX 16876972 - Exonic hg19 SKCM TCGA-D3-A3CC-06A 4 95 5'UTR-CDS Intra-chr p11.4 Oncogene p22.2 Tumor suppressor gene Seq+ 46503 ChimerSeq STARFusion TCGA_RNA-Seq AEBP2-PRLR AEBP2 chr12 19646920 + PRLR chr5 35118224 - Exonic hg19 SKCM TCGA-D3-A3CC-06A 13 41 CDS-5'UTR Inter-chr p12.3 Transcription factor p13.2 Seq+ 46504 ChimerSeq STARFusion TCGA_RNA-Seq PHC1-FGF10 PHC1 chr12 9070387 + FGF10 chr5 44310632 - Exonic hg19 SKCM TCGA-D3-A3CC-06A 11 48 Out-of-frame Inter-chr p13.31 p12 Seq+ 46505 ChimerSeq STARFusion TCGA_RNA-Seq GIPR-LGALS7B GIPR chr19 46181484 + LGALS7B chr19 39281329 + Exonic hg19 SKCM TCGA-D3-A3CC-06A 9 40 Out-of-frame Intra-chr q13.32 46506 ChimerSeq STARFusion TCGA_RNA-Seq PEPD-GRAMD1A PEPD chr19 33953901 - GRAMD1A chr19 35500023 + Exonic hg19 SKCM TCGA-D3-A3CC-06A 11 27 In-Frame Intra-chr q13.11 q13.11 Seq+ 46507 ChimerSeq STARFusion TCGA_RNA-Seq CAPRIN2-R3HDM2 CAPRIN2 chr12 30893954 - R3HDM2 chr12 57699446 - Exonic hg19 SKCM TCGA-D3-A3CC-06A 5 39 3'UTR-CDS Intra-chr p11.21 q13.3 Seq+ 46508 ChimerSeq STARFusion TCGA_RNA-Seq CAPRIN2-R3HDM2 CAPRIN2 chr12 30893954 - R3HDM2 chr12 57697000 - Exonic hg19 SKCM TCGA-D3-A3CC-06A 5 37 In-Frame Intra-chr p11.21 q13.3 Seq+ 46509 ChimerSeq STARFusion TCGA_RNA-Seq PHC1-FGF10 PHC1 chr12 9067423 + FGF10 chr5 44310632 - Exonic hg19 SKCM TCGA-D3-A3CC-06A 4 30 5'UTR-CDS Inter-chr p13.31 p12 Seq+ 46510 ChimerSeq STARFusion TCGA_RNA-Seq MYH14-SIGLEC16 MYH14 chr19 50721028 + SIGLEC16 chr19 50476300 + Exonic hg19 SKCM TCGA-D3-A3CC-06A 4 24 CDS-5'UTR Intra-chr q13.33 q13.33 Seq+ 46511 ChimerSeq STARFusion TCGA_RNA-Seq MYO9B-DOCK6 MYO9B chr19 17213367 + DOCK6 chr19 11364402 - Exonic hg19 SKCM TCGA-D3-A3CC-06A 2 13 Out-of-frame Intra-chr p13.11 p13.2 Seq+ 46512 ChimerSeq STARFusion TCGA_RNA-Seq PARP11-MDM2 PARP11 chr12 3973002 - MDM2 chr12 69229609 + Exonic hg19 SKCM TCGA-D3-A3CC-06A 2 13 Out-of-frame Intra-chr p13.32 q15 Oncogene 46513 ChimerSeq STARFusion TCGA_RNA-Seq LIG1-NTF4 LIG1 chr19 48664629 - NTF4 chr19 49567119 - Exonic hg19 SKCM TCGA-D3-A3CC-06A 2 9 CDS-5'UTR Intra-chr q13.33 Tumor suppressor gene q13.33 Seq+ 46514 ChimerSeq STARFusion TCGA_RNA-Seq FAM168A-MYEOV FAM168A chr11 73308968 - MYEOV chr11 69156278 + Exonic hg19 SKCM TCGA-DA-A95V-06A 7 58 5'UTR-3'UTR Intra-chr q13.4 q13.3 Seq+ 46515 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-FMNL1 IGH@ chr14 106733145 - FMNL1 chr17 43310441 + Exonic hg19 SKCM TCGA-DA-A95V-06A 14 1 Out-of-frame Inter-chr 32.33 q21.31 46516 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-MYO10 IGH@ chr14 106805207 - MYO10 chr5 16701249 - Exonic hg19 SKCM TCGA-DA-A95V-06A 12 2 Out-of-frame Inter-chr 32.33 p15.1 46517 ChimerSeq STARFusion TCGA_RNA-Seq MED9-IGH@ MED9 chr17 17380995 + IGH@ chr14 106330832 - Exonic hg19 SKCM TCGA-DA-A95V-06A 11 1 Out-of-frame Inter-chr p11.2 32.33 46518 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-MYO10 IGH@ chr14 107048670 - MYO10 chr5 16701249 - Exonic hg19 SKCM TCGA-DA-A95V-06A 7 2 Out-of-frame Inter-chr 32.33 p15.1 46519 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-MYO10 IGH@ chr14 107095124 - MYO10 chr5 16701249 - Exonic hg19 SKCM TCGA-DA-A95V-06A 6 2 Out-of-frame Inter-chr 32.33 p15.1 46520 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-PFKL IGH@ chr14 106539080 - PFKL chr21 45744314 + Exonic hg19 SKCM TCGA-DA-A95V-06A 6 1 Out-of-frame Inter-chr 32.33 q22.3 46521 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-MYO10 IGH@ chr14 106733142 - MYO10 chr5 16701249 - Exonic hg19 SKCM TCGA-DA-A95V-06A 5 2 Out-of-frame Inter-chr 32.33 p15.1 46522 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1E-PHF5A CSNK1E chr22 38710087 - PHF5A chr22 41864151 - Exonic hg19 SKCM TCGA-EE-A2ME-06A 35 90 In-Frame Intra-chr q13.1 q13.2 Seq+ 46523 ChimerSeq STARFusion TCGA_RNA-Seq CENPM-NHP2L1 CENPM chr22 42339614 - NHP2L1 chr22 42076368 - Exonic hg19 SKCM TCGA-EE-A2ME-06A 13 164 In-Frame Intra-chr q13.2 46524 ChimerSeq STARFusion TCGA_RNA-Seq CENPM-NHP2L1 CENPM chr22 42342421 - NHP2L1 chr22 42071199 - Exonic hg19 SKCM TCGA-EE-A2ME-06A 7 162 Out-of-frame Intra-chr q13.2 46525 ChimerSeq STARFusion TCGA_RNA-Seq CENPM-NHP2L1 CENPM chr22 42339614 - NHP2L1 chr22 42078591 - Exonic hg19 SKCM TCGA-EE-A2ME-06A 2 162 CDS-5'UTR Intra-chr q13.2 46526 ChimerSeq STARFusion TCGA_RNA-Seq ARFGAP1-IGH@ ARFGAP1 chr20 61920336 + IGH@ chr14 106209410 - Exonic hg19 SKCM TCGA-EE-A2ME-06A 12 1 Out-of-frame Inter-chr q13.33 32.33 46527 ChimerSeq STARFusion TCGA_RNA-Seq ARFGAP1-IGHG1 ARFGAP1 chr20 61920336 + IGHG1 chr14 106209410 - Exonic hg19 SKCM TCGA-EE-A2ME-06A 12 1 Out-of-frame Inter-chr q13.33 q32.33 46528 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D22A-ARFGAP3 TBC1D22A chr22 47158745 + ARFGAP3 chr22 43195166 - Exonic hg19 SKCM TCGA-EE-A2ME-06A 5 23 Out-of-frame Intra-chr q13.31 q13.2 Seq+ 46529 ChimerSeq STARFusion TCGA_RNA-Seq ARFGAP1-IGH@ ARFGAP1 chr20 61920336 + IGH@ chr14 106136184 - Exonic hg19 SKCM TCGA-EE-A2ME-06A 9 1 Out-of-frame Inter-chr q13.33 32.33 46530 ChimerSeq STARFusion TCGA_RNA-Seq GAB2-NUDC GAB2 chr11 78128692 - NUDC chr1 27250580 + Exonic hg19 SKCM TCGA-EB-A5SH-06A 124 267 In-Frame Inter-chr q14.1 p36.11 Seq+ 46531 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-RAP1GAP SBNO2 chr19 1154183 - RAP1GAP chr1 21976289 - Exonic hg19 SKCM TCGA-EB-A5SH-06A 46 234 Out-of-frame Inter-chr p13.3 p36.12 Tumor suppressor gene Seq+ 46532 ChimerSeq STARFusion TCGA_RNA-Seq CHERP-HSH2D CHERP chr19 16643409 - HSH2D chr19 16268020 + Exonic hg19 SKCM TCGA-EB-A5SH-06A 34 223 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 46533 ChimerSeq STARFusion TCGA_RNA-Seq C6orf106-PRAMEF18 C6orf106 chr6 34614378 - PRAMEF18 chr1 13475262 - Exonic hg19 SKCM TCGA-EB-A5SH-06A 12 91 CDS-3'UTR Inter-chr p21.31 46534 ChimerSeq STARFusion TCGA_RNA-Seq SMAP2-NLRX1 SMAP2 chr1 40839895 + NLRX1 chr11 119042065 + Exonic hg19 SKCM TCGA-EB-A5SH-06A 24 40 CDS-5'UTR Inter-chr p34.2 q23.3 Seq+ 46535 ChimerSeq STARFusion TCGA_RNA-Seq CD2AP-FKBP5 CD2AP chr6 47501491 + FKBP5 chr6 35688325 - Exonic hg19 SKCM TCGA-EB-A5SH-06A 8 33 CDS-5'UTR Intra-chr p12.3 p21.31 Seq+ 46536 ChimerSeq STARFusion TCGA_RNA-Seq ANO1-KIF21A ANO1 chr11 69924820 + KIF21A chr12 39705355 - Exonic hg19 SKCM TCGA-EB-A5SH-06A 2 9 Out-of-frame Inter-chr q13.3 q12 Seq+ 46537 ChimerSeq STARFusion TCGA_RNA-Seq PRR12-FDX1L PRR12 chr19 50105175 + FDX1L chr19 10421616 - Exonic hg19 SKCM TCGA-ER-A3ET-06A 17 90 Out-of-frame Intra-chr q13.33 Transcription factor Seq+ 46538 ChimerSeq STARFusion TCGA_RNA-Seq EGLN2-SIGLEC20P EGLN2 chr19 41307320 + SIGLEC20P chr19 51693879 + Exonic hg19 SKCM TCGA-ER-A3ET-06A 13 105 Out-of-frame Intra-chr q13.2 q13.41 Seq+ 46539 ChimerSeq STARFusion TCGA_RNA-Seq RALY-PAK7 RALY chr20 32619410 + PAK7 chr20 9538381 - Exonic hg19 SKCM TCGA-ER-A3ET-06A 21 46 5'UTR-CDS Intra-chr q11.22 Seq+ 46540 ChimerSeq STARFusion TCGA_RNA-Seq EGLN2-SIGLEC20P EGLN2 chr19 41307320 + SIGLEC20P chr19 51690900 + Exonic hg19 SKCM TCGA-ER-A3ET-06A 5 105 Out-of-frame Intra-chr q13.2 q13.41 Seq+ 46541 ChimerSeq STARFusion TCGA_RNA-Seq KBTBD2-RP9P KBTBD2 chr7 32931148 - RP9P chr7 32973508 - Exonic hg19 SKCM TCGA-ER-A3ET-06A 14 28 5'UTR-3'UTR Intra-chr p14.3 p14.3 46542 ChimerSeq STARFusion TCGA_RNA-Seq KBTBD2-RP9P KBTBD2 chr7 32931148 - RP9P chr7 32969720 - Exonic hg19 SKCM TCGA-ER-A3ET-06A 4 26 5'UTR-3'UTR Intra-chr p14.3 p14.3 46543 ChimerSeq STARFusion TCGA_RNA-Seq NEGR1-CYP2J2 NEGR1 chr1 72748002 - CYP2J2 chr1 60381772 - Exonic hg19 SKCM TCGA-ER-A3ET-06A 4 11 Out-of-frame Intra-chr p31.1 p32.1 Seq+ 46544 ChimerSeq STARFusion TCGA_RNA-Seq OTUB1-DLG2 OTUB1 chr11 63753986 + DLG2 chr11 84245774 - Exonic hg19 SKCM TCGA-ER-A3ET-06A 4 5 Out-of-frame Intra-chr q13.1 q14.1 Seq+ 46545 ChimerSeq STARFusion TCGA_RNA-Seq ZNF134-RYR1 ZNF134 chr19 58125871 + RYR1 chr19 39033987 + Exonic hg19 SKCM TCGA-ER-A3ET-06A 3 8 5'UTR-CDS Intra-chr q13.43 Transcription factor q13.2 Seq+ 46546 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS7-TMEM135 ADAMTS7 chr15 79103463 - TMEM135 chr11 86947680 + Exonic hg19 SKCM TCGA-ER-A3ET-06A 2 5 Out-of-frame Inter-chr q25.1 q14.2 Seq+ 46547 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-TINAGL1 IGHG1 chr14 106134591 - TINAGL1 chr1 32052503 + Exonic hg19 SKCM TCGA-EE-A3JH-06A 85 1 Out-of-frame Inter-chr q32.33 p35.2 46548 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-NOTCH1 IGHG1 chr14 106134590 - NOTCH1 chr9 139403428 - Exonic hg19 SKCM TCGA-EE-A3JH-06A 14 1 Out-of-frame Inter-chr q32.33 q34.3 Oncogene Tumor suppressor gene 46549 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0141-IGL@ KIAA0141 chr5 141309596 + IGL@ chr22 23247168 + Exonic hg19 SKCM TCGA-EE-A3JH-06A 13 2 Out-of-frame Inter-chr q31.3 q11.22 46550 ChimerSeq STARFusion TCGA_RNA-Seq ZNF644-DPYD ZNF644 chr1 91487547 - DPYD chr1 97700550 - Exonic hg19 SKCM TCGA-EE-A3JH-06A 12 4 5'UTR-CDS Intra-chr p22.2 Transcription factor p21.3 Oncogene Seq+ 46551 ChimerSeq STARFusion TCGA_RNA-Seq SH3D21-IGHG3 SH3D21 chr1 36775182 + IGHG3 chr14 106330467 - Exonic hg19 SKCM TCGA-EE-A3JH-06A 7 1 Out-of-frame Inter-chr p34.3 46552 ChimerSeq STARFusion TCGA_RNA-Seq LOC100128675-LGI4 LOC100128675 chr19 35597133 - LGI4 chr19 35622946 - Exonic hg19 SKCM TCGA-FS-A1YX-06A 2 3 3'UTR-CDS Intra-chr q13.12 46553 ChimerSeq STARFusion TCGA_RNA-Seq DBP-CA11 DBP chr19 49140113 - CA11 chr19 49142310 - Exonic hg19 SKCM TCGA-FS-A1YX-06A 2 2 Out-of-frame Intra-chr q13.33 Transcription factor q13.33 Tumor suppressor gene Seq+ 46554 ChimerSeq STARFusion TCGA_RNA-Seq SGSM2-EIF2B4 SGSM2 chr17 2276807 + EIF2B4 chr2 27591330 - Exonic hg19 SKCM TCGA-FS-A1YX-06A 2 0 In-Frame Inter-chr p13.3 Transcription factor p23.3 46555 ChimerSeq STARFusion TCGA_RNA-Seq TIMM23B-LINC00843 TIMM23B chr10 51387763 + LINC00843 chr10 51732772 + Exonic hg19 SKCM TCGA-EB-A51B-01A 14 51 Out-of-frame Intra-chr q11.23 q11.23 46556 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12022903 + NTRK3 chr15 88483984 - Exonic hg19 SKCM TCGA-EB-A51B-01A 9 26 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 46557 ChimerSeq STARFusion TCGA_RNA-Seq GLG1-FBXW8 GLG1 chr16 74506247 - FBXW8 chr12 117383169 + Exonic hg19 SKCM TCGA-EB-A1NK-01A 36 103 In-Frame Inter-chr q23.1 q24.22 Seq+ 46558 ChimerSeq STARFusion TCGA_RNA-Seq GLG1-FBXW8 GLG1 chr16 74508444 - FBXW8 chr12 117383169 + Exonic hg19 SKCM TCGA-EB-A1NK-01A 21 100 In-Frame Inter-chr q23.1 q24.22 Seq+ 46559 ChimerSeq STARFusion TCGA_RNA-Seq MED13L-METTL9 MED13L chr12 116675273 - METTL9 chr16 21629186 + Exonic hg19 SKCM TCGA-EB-A1NK-01A 7 57 Out-of-frame Inter-chr q24.21 Seq+ 46560 ChimerSeq STARFusion TCGA_RNA-Seq MED13L-METTL9 MED13L chr12 116642858 - METTL9 chr16 21629186 + Exonic hg19 SKCM TCGA-EB-A1NK-01A 4 57 Out-of-frame Inter-chr q24.21 Seq+ 46561 ChimerSeq STARFusion TCGA_RNA-Seq SPPL2A-TENM4 SPPL2A chr15 51012137 - TENM4 chr11 78781054 - Exonic hg19 SKCM TCGA-ER-A19T-06A 22 119 Out-of-frame Inter-chr q21.2 q14.1 Seq+ 46562 ChimerSeq STARFusion TCGA_RNA-Seq SPPL2A-TENM4 SPPL2A chr15 51014321 - TENM4 chr11 78781054 - Exonic hg19 SKCM TCGA-ER-A19T-06A 10 104 Out-of-frame Inter-chr q21.2 q14.1 Seq+ 46563 ChimerSeq STARFusion TCGA_RNA-Seq GAB2-FGF7 GAB2 chr11 77961203 - FGF7 chr15 49775348 + Exonic hg19 SKCM TCGA-ER-A19T-06A 12 94 Out-of-frame Inter-chr q14.1 q21.2 Seq+ 46564 ChimerSeq STARFusion TCGA_RNA-Seq FAM168A-PXDNL FAM168A chr11 73308968 - PXDNL chr8 52339318 - Exonic hg19 SKCM TCGA-ER-A19T-06A 15 49 5'UTR-CDS Inter-chr q13.4 q11.23 Seq+ 46565 ChimerSeq STARFusion TCGA_RNA-Seq GAB2-FGF7 GAB2 chr11 77961203 - FGF7 chr15 49716638 + Exonic hg19 SKCM TCGA-ER-A19T-06A 3 88 Out-of-frame Inter-chr q14.1 q21.2 Seq+ 46566 ChimerSeq STARFusion TCGA_RNA-Seq MACROD1-BAD MACROD1 chr11 63918711 - BAD chr11 64039275 - Exonic hg19 SKCM TCGA-ER-A19T-06A 11 53 In-Frame Intra-chr q13.1 q13.1 Seq+ 46567 ChimerSeq STARFusion TCGA_RNA-Seq GAB2-FGF7 GAB2 chr11 77961203 - FGF7 chr15 49716229 + Exonic hg19 SKCM TCGA-ER-A19T-06A 2 88 CDS-5'UTR Inter-chr q14.1 q21.2 Seq+ 46568 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-TPCN2 PVT1 chr8 128806980 + TPCN2 chr11 68825046 + Exonic hg19 SKCM TCGA-ER-A19T-06A 7 59 5'UTR-CDS Inter-chr q24.21 q13.3 Seq+ 46569 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-TPCN2 PVT1 chr8 128806980 + TPCN2 chr11 68830352 + Exonic hg19 SKCM TCGA-ER-A19T-06A 4 58 5'UTR-CDS Inter-chr q24.21 q13.3 Seq+ 46570 ChimerSeq STARFusion TCGA_RNA-Seq PXDNL-USP8 PXDNL chr8 52252184 - USP8 chr15 50769473 + Exonic hg19 SKCM TCGA-ER-A19T-06A 2 23 Out-of-frame Inter-chr q11.23 q21.2 Seq+ 46571 ChimerSeq STARFusion TCGA_RNA-Seq UBAC1-SHANK2 UBAC1 chr9 138852871 - SHANK2 chr11 70935842 - Exonic hg19 SKCM TCGA-ER-A19T-06A 4 15 CDS-5'UTR Inter-chr q34.3 q13.4 Seq+ 46572 ChimerSeq STARFusion TCGA_RNA-Seq FAM168A-RNF121 FAM168A chr11 73308968 - RNF121 chr11 71668273 + Exonic hg19 SKCM TCGA-ER-A19T-06A 5 8 5'UTR-CDS Intra-chr q13.4 q13.4 Seq+ 46573 ChimerSeq STARFusion TCGA_RNA-Seq MKLN1-NRF1 MKLN1 chr7 131122756 + NRF1 chr7 129367081 + Exonic hg19 SKCM TCGA-ER-A19T-06A 4 7 Out-of-frame Intra-chr q32.3 q32.2 Tumor suppressor gene Transcription factor Seq+ 46574 ChimerSeq STARFusion TCGA_RNA-Seq FAM168A-RNF121 FAM168A chr11 73284153 - RNF121 chr11 71668273 + Exonic hg19 SKCM TCGA-ER-A19T-06A 3 8 5'UTR-CDS Intra-chr q13.4 q13.4 Seq+ 46575 ChimerSeq STARFusion TCGA_RNA-Seq MYL12B-LINC00470 MYL12B chr18 3262235 + LINC00470 chr18 1278634 - Exonic hg19 SKCM TCGA-ER-A19T-06A 3 8 5'UTR-3'UTR Intra-chr p11.31 p11.32 46576 ChimerSeq STARFusion TCGA_RNA-Seq RNF121-PXDNL RNF121 chr11 71668310 + PXDNL chr8 52339318 - Exonic hg19 SKCM TCGA-ER-A19T-06A 4 4 Out-of-frame Inter-chr q13.4 q11.23 Seq+ 46577 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1468-NFATC1 KIAA1468 chr18 59855264 + NFATC1 chr18 77287528 + Exonic hg19 SKCM TCGA-ER-A19T-06A 2 8 In-Frame Intra-chr q21.33 q23 Transcription factor Seq+ 46578 ChimerSeq STARFusion TCGA_RNA-Seq PIAS2-ST8SIA5 PIAS2 chr18 44395275 - ST8SIA5 chr18 44272218 - Exonic hg19 SKCM TCGA-ER-A19T-06A 2 7 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 46579 ChimerSeq STARFusion TCGA_RNA-Seq GTF2F1-ACP5 GTF2F1 chr19 6383322 - ACP5 chr19 11686067 - Exonic hg19 SKCM TCGA-EB-A550-01A 31 83 Out-of-frame Intra-chr p13.3 p13.2 Seq+ 46580 ChimerSeq STARFusion TCGA_RNA-Seq ACP5-GTF2F1 ACP5 chr19 11688408 - GTF2F1 chr19 6389648 - Exonic hg19 SKCM TCGA-EB-A550-01A 10 51 5'UTR-CDS Intra-chr p13.2 p13.3 Seq+ 46581 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-ZGLP1 DNM2 chr19 10829079 + ZGLP1 chr19 10419226 - Exonic hg19 SKCM TCGA-EB-A550-01A 3 21 Out-of-frame Intra-chr p13.2 p13.2 Transcription factor Seq+ 46582 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-FDX1L DNM2 chr19 10829079 + FDX1L chr19 10419226 - Exonic hg19 SKCM TCGA-EB-A550-01A 3 16 CDS-3'UTR Intra-chr p13.2 Seq+ 46583 ChimerSeq STARFusion TCGA_RNA-Seq EHD4-GPR176 EHD4 chr15 42264457 - GPR176 chr15 40099459 - Exonic hg19 SKCM TCGA-EB-A550-01A 2 5 Out-of-frame Intra-chr q15.1 q15.1 Seq+ 46584 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM2-LRP1 R3HDM2 chr12 57696959 - LRP1 chr12 57577162 + Exonic hg19 SKCM TCGA-EB-A44Q-06A 41 223 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 46585 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM2-LRP1 R3HDM2 chr12 57696959 - LRP1 chr12 57577558 + Exonic hg19 SKCM TCGA-EB-A44Q-06A 16 216 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 46586 ChimerSeq STARFusion TCGA_RNA-Seq TRIO-ADAMTS12 TRIO chr5 14381361 + ADAMTS12 chr5 33881585 - Exonic hg19 SKCM TCGA-EB-A44Q-06A 20 110 Out-of-frame Intra-chr p15.2 p13.2 Seq+ 46587 ChimerSeq STARFusion TCGA_RNA-Seq CNOT2-FBXO4 CNOT2 chr12 70637260 + FBXO4 chr5 41929799 + Exonic hg19 SKCM TCGA-EB-A44Q-06A 36 27 5'UTR-CDS Inter-chr q15 p13.1 Seq+ 46588 ChimerSeq STARFusion TCGA_RNA-Seq CNOT2-FBXO4 CNOT2 chr12 70637260 + FBXO4 chr5 41927115 + Exonic hg19 SKCM TCGA-EB-A44Q-06A 20 27 5'UTR-CDS Inter-chr q15 p13.1 Seq+ 46589 ChimerSeq STARFusion TCGA_RNA-Seq OXCT1-PRKAA1 OXCT1 chr5 41794105 - PRKAA1 chr5 40777688 - Exonic hg19 SKCM TCGA-EB-A44Q-06A 12 41 Out-of-frame Intra-chr p13.1 p13.1 Tumor suppressor gene Seq+ 46590 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM2-PRDM9 R3HDM2 chr12 57824503 - PRDM9 chr5 23493580 + Exonic hg19 SKCM TCGA-EB-A44Q-06A 14 12 Out-of-frame Inter-chr q13.3 p14.2 Transcription factor Seq+ 46591 ChimerSeq STARFusion TCGA_RNA-Seq MYO10-FAM186A MYO10 chr5 16818118 - FAM186A chr12 50750031 - Exonic hg19 SKCM TCGA-EB-A44Q-06A 4 43 Out-of-frame Inter-chr p15.1 q13.12 Seq+ 46592 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM2-METTL24 R3HDM2 chr12 57789532 - METTL24 chr6 110644075 - Exonic hg19 SKCM TCGA-EB-A44Q-06A 7 30 5'UTR-CDS Inter-chr q13.3 q21 46593 ChimerSeq STARFusion TCGA_RNA-Seq FRMD4B-MITF FRMD4B chr3 69591357 - MITF chr3 69928285 + Exonic hg19 SKCM TCGA-EB-A44Q-06A 3 43 5'UTR-5'UTR Intra-chr p14.1 p13 Oncogene Transcription factor 46594 ChimerSeq STARFusion TCGA_RNA-Seq MAPK14-SIN3A MAPK14 chr6 35996050 + SIN3A chr15 75722749 - Exonic hg19 SKCM TCGA-EB-A44Q-06A 4 14 CDS-5'UTR Inter-chr p21.31 q24.2 Seq+ 46595 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS12-RAI14 ADAMTS12 chr5 33881224 - RAI14 chr5 34757573 + Exonic hg19 SKCM TCGA-EB-A44Q-06A 4 11 In-Frame Intra-chr p13.2 p13.2 Seq+ 46596 ChimerSeq STARFusion TCGA_RNA-Seq NOS1-UBC NOS1 chr12 117723046 - UBC chr12 125399308 - Exonic hg19 SKCM TCGA-EB-A44Q-06A 3 13 CDS-5'UTR Intra-chr q24.22 q24.31 Seq+ 46597 ChimerSeq STARFusion TCGA_RNA-Seq SLC16A7-GOLPH3 SLC16A7 chr12 59990017 + GOLPH3 chr5 32135792 - Exonic hg19 SKCM TCGA-EB-A44Q-06A 4 9 5'UTR-CDS Inter-chr q14.1 p13.3 Seq+ 46598 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM2-USP15 R3HDM2 chr12 57789532 - USP15 chr12 62749112 + Exonic hg19 SKCM TCGA-EB-A44Q-06A 4 7 5'UTR-CDS Intra-chr q13.3 q14.1 Seq+ 46599 ChimerSeq STARFusion TCGA_RNA-Seq NOS1-UBC NOS1 chr12 117723046 - UBC chr12 125398320 - Exonic hg19 SKCM TCGA-EB-A44Q-06A 2 13 CDS-5'UTR Intra-chr q24.22 q24.31 Seq+ 46600 ChimerSeq STARFusion TCGA_RNA-Seq C6orf57-SH3BGRL2 C6orf57 chr6 71289269 + SH3BGRL2 chr6 80383331 + Exonic hg19 SKCM TCGA-EB-A44Q-06A 3 8 Out-of-frame Intra-chr q14.1 Seq+ 46601 ChimerSeq STARFusion TCGA_RNA-Seq MITF-FRMD4B MITF chr3 69788852 + FRMD4B chr3 69481912 - Exonic hg19 SKCM TCGA-EB-A44Q-06A 3 5 CDS-5'UTR Intra-chr p13 Oncogene Transcription factor p14.1 Seq+ 46602 ChimerSeq STARFusion TCGA_RNA-Seq TRIO-CLIC5 TRIO chr5 14420130 + CLIC5 chr6 45922981 - Exonic hg19 SKCM TCGA-EB-A44Q-06A 2 7 Out-of-frame Inter-chr p15.2 p21.1 Seq+ 46603 ChimerSeq STARFusion TCGA_RNA-Seq TRIO-LIFR TRIO chr5 14143991 + LIFR chr5 38489347 - Exonic hg19 SKCM TCGA-EB-A44Q-06A 2 5 In-Frame Intra-chr p15.2 p13.1 Oncogene Tumor suppressor gene Seq+ 46604 ChimerSeq STARFusion TCGA_RNA-Seq MLLT3-DENND4C MLLT3 chr9 20620653 - DENND4C chr9 19276156 + Exonic hg19 SKCM TCGA-D3-A1Q6-06A 2 16 CDS-5'UTR Intra-chr p21.3 p22.1 Seq+ 46605 ChimerSeq STARFusion TCGA_RNA-Seq NCOA1-UBXN2A NCOA1 chr2 24920667 + UBXN2A chr2 24222542 + Exonic hg19 SKCM TCGA-D3-A1Q6-06A 3 5 Out-of-frame Intra-chr p23.3 Oncogene Transcription factor p23.3 Seq+ 46606 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-LINC00511 SLC39A11 chr17 70943869 - LINC00511 chr17 70427364 - Exonic hg19 SKCM TCGA-EE-A29N-06A 4 67 Out-of-frame Intra-chr q25.1 q24.3 46607 ChimerSeq STARFusion TCGA_RNA-Seq SPARC-ELK3 SPARC chr5 151042567 - ELK3 chr12 96640958 + Exonic hg19 SKCM TCGA-EB-A6QZ-01A 4 1 Out-of-frame Inter-chr q33.1 Tumor suppressor gene q23.1 Transcription factor 46608 ChimerSeq STARFusion TCGA_RNA-Seq NEDD9-DTNBP1 NEDD9 chr6 11232737 - DTNBP1 chr6 15533626 - Exonic hg19 SKCM TCGA-EB-A85J-01A 18 85 Out-of-frame Intra-chr p24.2 p22.3 Seq+ 46609 ChimerSeq STARFusion TCGA_RNA-Seq NEDD9-DTNBP1 NEDD9 chr6 11232737 - DTNBP1 chr6 15593312 - Exonic hg19 SKCM TCGA-EB-A85J-01A 8 84 Out-of-frame Intra-chr p24.2 p22.3 Seq+ 46610 ChimerSeq STARFusion TCGA_RNA-Seq GOLGA5-RIN3 GOLGA5 chr14 93275864 + RIN3 chr14 93022096 + Exonic hg19 SKCM TCGA-EB-A85J-01A 13 30 In-Frame Intra-chr q32.12 q32.12 Seq+ 46611 ChimerSeq STARFusion TCGA_RNA-Seq TOR4A-UAP1L1 TOR4A chr9 140174282 + UAP1L1 chr9 139974454 + Exonic hg19 SKCM TCGA-EB-A85J-01A 7 16 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 46612 ChimerSeq STARFusion TCGA_RNA-Seq CCDC88C-GANC CCDC88C chr14 91845915 - GANC chr15 42560145 + Exonic hg19 SKCM TCGA-EB-A85J-01A 5 9 Out-of-frame Inter-chr q32.12 q15.1 46613 ChimerSeq STARFusion TCGA_RNA-Seq WRNIP1-SERPINB6 WRNIP1 chr6 2770595 + SERPINB6 chr6 2959576 - Exonic hg19 SKCM TCGA-EB-A85J-01A 3 4 CDS-5'UTR Intra-chr p25.2 p25.2 Seq+ 46614 ChimerSeq STARFusion TCGA_RNA-Seq EIF3FP3-ABHD1 EIF3FP3 chr2 58478704 + ABHD1 chr2 27351243 + Exonic hg19 SKCM TCGA-FW-A5DX-01A 7 69 Out-of-frame Intra-chr p16.1 p23.3 46615 ChimerSeq STARFusion TCGA_RNA-Seq TTC3-ITM2B TTC3 chr21 38460175 + ITM2B chr13 48827944 + Exonic hg19 SKCM TCGA-FW-A5DX-01A 12 40 Out-of-frame Inter-chr q22.13 q14.2 Seq+ 46616 ChimerSeq STARFusion TCGA_RNA-Seq ITM2B-TTC3 ITM2B chr13 48835457 + TTC3 chr21 38466305 + Exonic hg19 SKCM TCGA-FW-A5DX-01A 8 45 3'UTR-CDS Inter-chr q14.2 q22.13 Seq+ 46617 ChimerSeq STARFusion TCGA_RNA-Seq DROSHA-TERT DROSHA chr5 31421379 - TERT chr5 1282739 - Exonic hg19 SKCM TCGA-FW-A5DX-01A 5 43 Out-of-frame Intra-chr p13.3 p15.33 Oncogene Seq+ 46618 ChimerSeq STARFusion TCGA_RNA-Seq RB1-MED4 RB1 chr13 48916850 + MED4 chr13 48664554 - Exonic hg19 SKCM TCGA-FW-A5DX-01A 6 37 In-Frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Seq+ 46619 ChimerSeq STARFusion TCGA_RNA-Seq ITM2B-TTC3 ITM2B chr13 48835457 + TTC3 chr21 38467650 + Exonic hg19 SKCM TCGA-FW-A5DX-01A 2 35 3'UTR-CDS Inter-chr q14.2 q22.13 Seq+ 46620 ChimerSeq STARFusion TCGA_RNA-Seq XRRA1-C11orf30 XRRA1 chr11 74659973 - C11orf30 chr11 76174865 + Exonic hg19 SKCM TCGA-D3-A8GB-06A 25 122 5'UTR-CDS Intra-chr q13.4 Seq+ 46621 ChimerSeq STARFusion TCGA_RNA-Seq LSM4-ADRBK1 LSM4 chr19 18433828 - ADRBK1 chr11 67046671 + Exonic hg19 SKCM TCGA-D3-A8GB-06A 29 42 Out-of-frame Inter-chr p13.11 Seq+ 46622 ChimerSeq STARFusion TCGA_RNA-Seq CTSF-RANBP3 CTSF chr11 66335745 - RANBP3 chr19 5921332 - Exonic hg19 SKCM TCGA-D3-A8GB-06A 19 48 In-Frame Inter-chr q13.2 p13.3 Seq+ 46623 ChimerSeq STARFusion TCGA_RNA-Seq SEMA3E-CEP41 SEMA3E chr7 83277744 - CEP41 chr7 130056807 - Exonic hg19 SKCM TCGA-FS-A1ZB-06A 14 28 In-Frame Intra-chr q21.11 q32.2 Seq+ 46624 ChimerSeq STARFusion TCGA_RNA-Seq DIP2B-TBC1D15 DIP2B chr12 50899023 + TBC1D15 chr12 72315148 + Exonic hg19 SKCM TCGA-BF-A1PU-01A 22 33 Out-of-frame Intra-chr q13.12 q21.1 Seq+ 46625 ChimerSeq STARFusion TCGA_RNA-Seq ABCC10-IGH@ ABCC10 chr6 43415468 + IGH@ chr14 106330472 - Exonic hg19 SKCM TCGA-EE-A2MD-06A 13 1 Out-of-frame Inter-chr p21.1 32.33 46626 ChimerSeq STARFusion TCGA_RNA-Seq PRKAA2-USP24 PRKAA2 chr1 57111154 + USP24 chr1 55541196 - Exonic hg19 SKCM TCGA-EE-A2MD-06A 4 15 Out-of-frame Intra-chr p32.2 Tumor suppressor gene p32.3 Seq+ 46627 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-PMEL EGFR chr7 55242532 + PMEL chr12 56359738 - Exonic hg19 SKCM TCGA-EE-A2MD-06A 4 5 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q13.2 46628 ChimerSeq STARFusion TCGA_RNA-Seq DDB2-LRRC9 DDB2 chr11 47238600 + LRRC9 chr14 60530041 + Exonic hg19 SKCM TCGA-EE-A2A6-06A 40 173 Out-of-frame Inter-chr p11.2 Oncogene Tumor suppressor gene q23.1 Seq+ 46629 ChimerSeq STARFusion TCGA_RNA-Seq CALD1-AKR1B10 CALD1 chr7 134576424 + AKR1B10 chr7 134215395 + Exonic hg19 SKCM TCGA-EE-A2A6-06A 6 67 Out-of-frame Intra-chr q33 q33 Seq+ 46630 ChimerSeq STARFusion TCGA_RNA-Seq DAAM1-C12orf10 DAAM1 chr14 59798638 + C12orf10 chr12 53699692 + Exonic hg19 SKCM TCGA-EE-A2A6-06A 5 37 In-Frame Inter-chr q23.1 q13.13 Seq+ 46631 ChimerSeq STARFusion TCGA_RNA-Seq DAAM1-C12orf10 DAAM1 chr14 59798638 + C12orf10 chr12 53699982 + Exonic hg19 SKCM TCGA-EE-A2A6-06A 3 37 In-Frame Inter-chr q23.1 q13.13 Seq+ 46632 ChimerSeq STARFusion TCGA_RNA-Seq DAAM1-C12orf10 DAAM1 chr14 59798638 + C12orf10 chr12 53696818 + Exonic hg19 SKCM TCGA-EE-A2A6-06A 3 37 Out-of-frame Inter-chr q23.1 q13.13 Seq+ 46633 ChimerSeq STARFusion TCGA_RNA-Seq C15orf41-RAC2 C15orf41 chr15 37002162 + RAC2 chr22 37628958 - Exonic hg19 SKCM TCGA-ER-A19C-06A 26 113 In-Frame Inter-chr q14 q13.1 Seq+ 46634 ChimerSeq STARFusion TCGA_RNA-Seq ALDH1A2-ADAM10 ALDH1A2 chr15 58623378 - ADAM10 chr15 58891923 - Exonic hg19 SKCM TCGA-ER-A19C-06A 19 37 5'UTR-3'UTR Intra-chr q21.3 Tumor suppressor gene q21.3 46635 ChimerSeq STARFusion TCGA_RNA-Seq TAB1-PHF21B TAB1 chr22 39813854 + PHF21B chr22 45281818 - Exonic hg19 SKCM TCGA-ER-A19C-06A 8 33 Out-of-frame Intra-chr q13.1 q13.31 Seq+ 46636 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS17-NCF4 ADAMTS17 chr15 100533253 - NCF4 chr22 37260087 + Exonic hg19 SKCM TCGA-ER-A19C-06A 2 27 Out-of-frame Inter-chr q26.3 Seq+ 46637 ChimerSeq STARFusion TCGA_RNA-Seq USP10-ATP2C2 USP10 chr16 84773975 + ATP2C2 chr16 84442011 + Exonic hg19 SKCM TCGA-D3-A1Q1-06A 26 36 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 46638 ChimerSeq STARFusion TCGA_RNA-Seq C12orf44-CSRNP2 C12orf44 chr12 52464267 + CSRNP2 chr12 51470430 - Exonic hg19 SKCM TCGA-D3-A1Q1-06A 12 25 5'UTR-5'UTR Intra-chr q13.12 Transcription factor Seq+ 46639 ChimerSeq STARFusion TCGA_RNA-Seq RIMKLB-ELP3 RIMKLB chr12 8866637 + ELP3 chr8 27954736 + Exonic hg19 SKCM TCGA-D3-A1Q1-06A 7 27 In-Frame Inter-chr p13.31 p21.1 Seq+ 46640 ChimerSeq STARFusion TCGA_RNA-Seq DSTYK-BRAF DSTYK chr1 205180399 - BRAF chr7 140482957 - Exonic hg19 SKCM TCGA-EB-A97M-01A 7 30 In-Frame Inter-chr q32.1 q34 TKL:RAF Oncogene Seq+ 46641 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-TBC1D3G TANC2 chr17 61396451 + TBC1D3G chr17 34803431 - Exonic hg19 SKCM TCGA-D9-A4Z3-01A 21 98 In-Frame Intra-chr q23.2 q12 Seq+ 46642 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-TBC1D3H TANC2 chr17 61396451 + TBC1D3H chr17 34752380 - Exonic hg19 SKCM TCGA-D9-A4Z3-01A 21 98 In-Frame Intra-chr q23.2 q12 46643 ChimerSeq STARFusion TCGA_RNA-Seq TANC2-TBC1D3H TANC2 chr17 61396451 + TBC1D3H chr17 34803431 - Exonic hg19 SKCM TCGA-D9-A4Z3-01A 14 98 CDS-5'UTR Intra-chr q23.2 q12 46644 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-AOC4P SSH2 chr17 28175867 - AOC4P chr17 41020595 + Exonic hg19 SKCM TCGA-D9-A4Z3-01A 9 77 Out-of-frame Intra-chr q11.2 q21.31 Seq+ 46645 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-AOC4P SSH2 chr17 28256956 - AOC4P chr17 41006465 + Exonic hg19 SKCM TCGA-D9-A4Z3-01A 6 74 Out-of-frame Intra-chr q11.2 q21.31 Seq+ 46646 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-AOC4P SSH2 chr17 28256956 - AOC4P chr17 41024422 + Exonic hg19 SKCM TCGA-D9-A4Z3-01A 3 74 Out-of-frame Intra-chr q11.2 q21.31 Seq+ 46647 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-AOC4P SSH2 chr17 28175867 - AOC4P chr17 41004663 + Exonic hg19 SKCM TCGA-D9-A4Z3-01A 3 74 Out-of-frame Intra-chr q11.2 q21.31 Seq+ 46648 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-AOC4P SSH2 chr17 28175867 - AOC4P chr17 41024422 + Exonic hg19 SKCM TCGA-D9-A4Z3-01A 3 74 Out-of-frame Intra-chr q11.2 q21.31 Seq+ 46649 ChimerSeq STARFusion TCGA_RNA-Seq TROVE2-CDC73 TROVE2 chr1 193053785 + CDC73 chr1 193218858 + Exonic hg19 SKCM TCGA-D9-A4Z3-01A 6 57 Out-of-frame Intra-chr q31.2 q31.2 Oncogene Tumor suppressor gene 46650 ChimerSeq STARFusion TCGA_RNA-Seq TROVE2-CDC73 TROVE2 chr1 193053787 + CDC73 chr1 193218860 + Exonic hg19 SKCM TCGA-D9-A4Z3-01A 2 56 In-Frame Intra-chr q31.2 q31.2 Oncogene Tumor suppressor gene 46651 ChimerSeq STARFusion TCGA_RNA-Seq SH3GL2-FREM1 SH3GL2 chr9 17579285 + FREM1 chr9 14750274 - Exonic hg19 SKCM TCGA-D9-A4Z3-01A 4 4 Out-of-frame Intra-chr p22.2 p22.3 Seq+ 46652 ChimerSeq STARFusion TCGA_RNA-Seq EIF3L-CECR1 EIF3L chr22 38274178 + CECR1 chr22 17672700 - Exonic hg19 SKCM TCGA-EE-A184-06A 65 364 In-Frame Intra-chr q13.1 Seq+ 46653 ChimerSeq STARFusion TCGA_RNA-Seq DACH1-LINC00439 DACH1 chr13 72440054 - LINC00439 chr13 78519008 - Exonic hg19 SKCM TCGA-EE-A184-06A 25 205 Out-of-frame Intra-chr q21.33 Tumor suppressor gene Transcription factor 46654 ChimerSeq STARFusion TCGA_RNA-Seq FREM2-SNAP29 FREM2 chr13 39271924 + SNAP29 chr22 21241967 + Exonic hg19 SKCM TCGA-EE-A184-06A 13 209 In-Frame Inter-chr q13.3 q11.21 Seq+ 46655 ChimerSeq STARFusion TCGA_RNA-Seq DACH1-LINC00439 DACH1 chr13 72440054 - LINC00439 chr13 78514128 - Exonic hg19 SKCM TCGA-EE-A184-06A 5 205 Out-of-frame Intra-chr q21.33 Tumor suppressor gene Transcription factor 46656 ChimerSeq STARFusion TCGA_RNA-Seq COMT-ZDHHC11 COMT chr22 19929420 + ZDHHC11 chr5 825366 - Exonic hg19 SKCM TCGA-EE-A184-06A 36 56 5'UTR-CDS Inter-chr q11.21 p15.33 Seq+ 46657 ChimerSeq STARFusion TCGA_RNA-Seq COMT-ZDHHC11 COMT chr22 19939177 + ZDHHC11 chr5 825366 - Exonic hg19 SKCM TCGA-EE-A184-06A 7 56 5'UTR-CDS Inter-chr q11.21 p15.33 Seq+ 46658 ChimerSeq STARFusion TCGA_RNA-Seq RICTOR-LHFP RICTOR chr5 38966743 - LHFP chr13 39952663 - Exonic hg19 SKCM TCGA-EE-A184-06A 3 4 Out-of-frame Inter-chr p13.1 q14.11 Seq+ 46659 ChimerSeq STARFusion TCGA_RNA-Seq CDK13-PMEL CDK13 chr7 40127940 + PMEL chr12 56351782 - Exonic hg19 SKCM TCGA-EE-A184-06A 3 1 Out-of-frame Inter-chr p14.1 q13.2 46660 ChimerSeq STARFusion TCGA_RNA-Seq FAM126A-TRA2A FAM126A chr7 23023563 - TRA2A chr7 23547154 - Exonic hg19 SKCM TCGA-D9-A4Z6-06A 21 67 In-Frame Intra-chr p15.3 p15.3 Seq+ 46661 ChimerSeq STARFusion TCGA_RNA-Seq IREB2-DIAPH3 IREB2 chr15 78732223 + DIAPH3 chr13 60499004 - Exonic hg19 SKCM TCGA-GN-A262-06A 18 26 In-Frame Inter-chr q25.1 q21.2 Seq+ 46662 ChimerSeq STARFusion TCGA_RNA-Seq MYO10-C5orf38 MYO10 chr5 16877718 - C5orf38 chr5 2755143 + Exonic hg19 SKCM TCGA-D3-A2JC-06A 202 951 Out-of-frame Intra-chr p15.1 p15.33 Seq+ 46663 ChimerSeq STARFusion TCGA_RNA-Seq TAX1BP1-BRAF TAX1BP1 chr7 27827222 + BRAF chr7 140481493 - Exonic hg19 SKCM TCGA-D3-A2JC-06A 20 101 In-Frame Intra-chr p15.2 q34 TKL:RAF Oncogene Seq+ 46664 ChimerSeq STARFusion TCGA_RNA-Seq TRMU-ST13 TRMU chr22 46748227 + ST13 chr22 41231891 - Exonic hg19 SKCM TCGA-D3-A2JC-06A 15 119 In-Frame Intra-chr q13.31 q13.2 Tumor suppressor gene Seq+ 46665 ChimerSeq STARFusion TCGA_RNA-Seq POLR3H-CTNND2 POLR3H chr22 41936703 - CTNND2 chr5 11732384 - Exonic hg19 SKCM TCGA-D3-A2JC-06A 20 88 In-Frame Inter-chr q13.2 p15.2 Seq+ 46666 ChimerSeq STARFusion TCGA_RNA-Seq MIR4458HG-GRAP2 MIR4458HG chr5 8457879 + GRAP2 chr22 40343097 + Exonic hg19 SKCM TCGA-D3-A2JC-06A 22 52 Out-of-frame Inter-chr p15.31 q13.1 Seq+ 46667 ChimerSeq STARFusion TCGA_RNA-Seq XRCC6-CD8BP XRCC6 chr22 42057448 + CD8BP chr2 107114270 + Exonic hg19 SKCM TCGA-D3-A2JC-06A 12 6 Out-of-frame Inter-chr q13.2 46668 ChimerSeq STARFusion TCGA_RNA-Seq TRMU-ST13 TRMU chr22 46742441 + ST13 chr22 41231891 - Exonic hg19 SKCM TCGA-D3-A2JC-06A 3 31 In-Frame Intra-chr q13.31 q13.2 Tumor suppressor gene Seq+ 46669 ChimerSeq STARFusion TCGA_RNA-Seq TRMU-ST13 TRMU chr22 46749764 + ST13 chr22 41231891 - Exonic hg19 SKCM TCGA-D3-A2JC-06A 2 31 Out-of-frame Intra-chr q13.31 q13.2 Tumor suppressor gene Seq+ 46670 ChimerSeq STARFusion TCGA_RNA-Seq TRIP12-MAFF TRIP12 chr2 230786596 - MAFF chr22 38609830 + Exonic hg19 SKCM TCGA-D3-A2JC-06A 6 13 5'UTR-5'UTR Inter-chr q36.3 q13.1 Transcription factor Seq+ 46671 ChimerSeq STARFusion TCGA_RNA-Seq POLR1A-ACO2 POLR1A chr2 86259395 - ACO2 chr22 41895730 + Exonic hg19 SKCM TCGA-D3-A2JC-06A 2 23 CDS-5'UTR Inter-chr p11.2 q13.2 Seq+ 46672 ChimerSeq STARFusion TCGA_RNA-Seq NHP2L1-ATXN10 NHP2L1 chr22 42076248 - ATXN10 chr22 46098569 + Exonic hg19 SKCM TCGA-D3-A2JC-06A 3 7 Out-of-frame Intra-chr q13.31 46673 ChimerSeq STARFusion TCGA_RNA-Seq SHISA9-CREB5 SHISA9 chr16 13010672 + CREB5 chr7 28527793 + Exonic hg19 SKCM TCGA-D3-A2JC-06A 2 6 Out-of-frame Inter-chr p13.12 p15.1 Transcription factor Seq+ 46674 ChimerSeq STARFusion TCGA_RNA-Seq DCUN1D4-USP46 DCUN1D4 chr4 52752804 + USP46 chr4 53476783 - Exonic hg19 SKCM TCGA-ER-A19B-06A 5 34 In-Frame Intra-chr q12 q12 Seq+ 46675 ChimerSeq STARFusion TCGA_RNA-Seq C2orf43-RTN4 C2orf43 chr2 20939731 - RTN4 chr2 55214834 - Exonic hg19 SKCM TCGA-EB-A3XC-01A 2 26 In-Frame Intra-chr p16.1 Tumor suppressor gene Seq+ 46676 ChimerSeq STARFusion TCGA_RNA-Seq SAP130-BIN1 SAP130 chr2 128735559 - BIN1 chr2 127834282 - Exonic hg19 SKCM TCGA-EB-A3XC-01A 3 4 Out-of-frame Intra-chr q14.3 q14.3 Tumor suppressor gene Seq+ 46677 ChimerSeq STARFusion TCGA_RNA-Seq G3BP1-PDE4D G3BP1 chr5 151170623 + PDE4D chr5 59284544 - Exonic hg19 SKCM TCGA-D3-A51N-06A 20 85 In-Frame Intra-chr q33.1 q12.1 Seq+ 46678 ChimerSeq STARFusion TCGA_RNA-Seq MCCC2-NNT MCCC2 chr5 70900295 + NNT chr5 43675613 + Exonic hg19 SKCM TCGA-D3-A51N-06A 14 42 In-Frame Intra-chr q13.2 p12 Seq+ 46679 ChimerSeq STARFusion TCGA_RNA-Seq STK32A-SPINK5 STK32A chr5 146619249 + SPINK5 chr5 147449886 + Exonic hg19 SKCM TCGA-D3-A51N-06A 5 19 Out-of-frame Intra-chr q32 q32 Seq+ 46680 ChimerSeq STARFusion TCGA_RNA-Seq CANX-FAM153A CANX chr5 179134191 + FAM153A chr5 177190511 - Exonic hg19 SKCM TCGA-D3-A51N-06A 4 20 CDS-5'UTR Intra-chr q35.3 46681 ChimerSeq STARFusion TCGA_RNA-Seq CANX-FAM153A CANX chr5 179134191 + FAM153A chr5 177194181 - Exonic hg19 SKCM TCGA-D3-A51N-06A 3 20 CDS-5'UTR Intra-chr q35.3 46682 ChimerSeq STARFusion TCGA_RNA-Seq SREK1IP1-CCDC112 SREK1IP1 chr5 64060802 - CCDC112 chr5 114612751 - Exonic hg19 SKCM TCGA-D3-A51N-06A 4 16 Out-of-frame Intra-chr q12.3 q22.3 Seq+ 46683 ChimerSeq STARFusion TCGA_RNA-Seq SPINK5-DNAJC21 SPINK5 chr5 147505413 + DNAJC21 chr5 34945866 + Exonic hg19 SKCM TCGA-D3-A51N-06A 2 18 In-Frame Intra-chr q32 p13.2 Seq+ 46684 ChimerSeq STARFusion TCGA_RNA-Seq SREK1IP1-CCDC112 SREK1IP1 chr5 64064332 - CCDC112 chr5 114612751 - Exonic hg19 SKCM TCGA-D3-A51N-06A 2 16 In-Frame Intra-chr q12.3 q22.3 Seq+ 46685 ChimerSeq STARFusion TCGA_RNA-Seq FAM114A2-FBN2 FAM114A2 chr5 153413351 - FBN2 chr5 127609660 - Exonic hg19 SKCM TCGA-D3-A51N-06A 2 14 In-Frame Intra-chr q33.2 q23.3 Seq+ 46686 ChimerSeq STARFusion TCGA_RNA-Seq AP3B1-IPO11 AP3B1 chr5 77590276 - IPO11 chr5 61762958 + Exonic hg19 SKCM TCGA-D3-A51N-06A 2 7 Out-of-frame Intra-chr q14.1 q12.1 Seq+ 46687 ChimerSeq STARFusion TCGA_RNA-Seq PMEL-MORC2 PMEL chr12 56359720 - MORC2 chr22 31346431 - Exonic hg19 SKCM TCGA-EE-A3AE-06A 2 1 CDS-5'UTR Inter-chr q13.2 q12.2 46688 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SEC61A1 IGH@ chr14 106452671 - SEC61A1 chr3 127785826 + Exonic hg19 SKCM TCGA-EB-A24D-01A 81 3 Out-of-frame Inter-chr 32.33 q21.3 46689 ChimerSeq STARFusion TCGA_RNA-Seq SPTAN1-MAPKAP1 SPTAN1 chr9 131356652 + MAPKAP1 chr9 128268696 - Exonic hg19 SKCM TCGA-EB-A24D-01A 22 138 Out-of-frame Intra-chr q34.11 q33.3 Seq+ 46690 ChimerSeq STARFusion TCGA_RNA-Seq SPTAN1-MAPKAP1 SPTAN1 chr9 131353904 + MAPKAP1 chr9 128268696 - Exonic hg19 SKCM TCGA-EB-A24D-01A 4 137 Out-of-frame Intra-chr q34.11 q33.3 Seq+ 46691 ChimerSeq STARFusion TCGA_RNA-Seq DCT-IGL@ DCT chr13 95119885 - IGL@ chr22 23241803 + Exonic hg19 SKCM TCGA-EB-A24D-01A 29 11 Out-of-frame Inter-chr q32.1 q11.22 46692 ChimerSeq STARFusion TCGA_RNA-Seq DCT-IGLC2 DCT chr13 95119885 - IGLC2 chr22 23241803 + Exonic hg19 SKCM TCGA-EB-A24D-01A 29 2 Out-of-frame Inter-chr q32.1 q11.22 46693 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SEC61A1 IGH@ chr14 106641563 - SEC61A1 chr3 127785826 + Exonic hg19 SKCM TCGA-EB-A24D-01A 29 2 Out-of-frame Inter-chr 32.33 q21.3 46694 ChimerSeq STARFusion TCGA_RNA-Seq MVB12B-TG MVB12B chr9 129102909 + TG chr8 134107288 + Exonic hg19 SKCM TCGA-EB-A24D-01A 16 50 Out-of-frame Inter-chr q33.3 q24.22 46695 ChimerSeq STARFusion TCGA_RNA-Seq PTPRG-SYNPR PTPRG chr3 61734656 + SYNPR chr3 63466508 + Exonic hg19 SKCM TCGA-EB-A24D-01A 6 55 Out-of-frame Intra-chr p14.2 p14.2 Seq+ 46696 ChimerSeq STARFusion TCGA_RNA-Seq DCT-IGL@ DCT chr13 95119886 - IGL@ chr22 23247172 + Exonic hg19 SKCM TCGA-EB-A24D-01A 5 11 Out-of-frame Inter-chr q32.1 q11.22 46697 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB2-IGKC DNAJB2 chr2 220151425 + IGKC chr2 89156807 - Exonic hg19 SKCM TCGA-EB-A24D-01A 7 2 Out-of-frame Intra-chr q35 p11.2 46698 ChimerSeq STARFusion TCGA_RNA-Seq MED27-TG MED27 chr9 134889724 - TG chr8 134107288 + Exonic hg19 SKCM TCGA-EB-A24D-01A 4 13 Out-of-frame Inter-chr q34.13 q24.22 Seq+ 46699 ChimerSeq STARFusion TCGA_RNA-Seq MVB12B-MED27 MVB12B chr9 129102909 + MED27 chr9 134889854 - Exonic hg19 SKCM TCGA-EB-A24D-01A 3 16 Out-of-frame Intra-chr q33.3 q34.13 Seq+ 46700 ChimerSeq STARFusion TCGA_RNA-Seq ASTN2-AKAP2 ASTN2 chr9 119380603 - AKAP2 chr9 112898407 + Exonic hg19 SKCM TCGA-EE-A29A-06A 8 29 Out-of-frame Intra-chr q33.1 q31.3 Seq+ 46701 ChimerSeq STARFusion TCGA_RNA-Seq ASTN2-AKAP2 ASTN2 chr9 119380603 - AKAP2 chr9 112918599 + Exonic hg19 SKCM TCGA-EE-A29A-06A 2 29 In-Frame Intra-chr q33.1 q31.3 Seq+ 46702 ChimerSeq STARFusion TCGA_RNA-Seq ETV3-SEC22B ETV3 chr1 157105263 - SEC22B chr1 145109524 + Exonic hg19 SKCM TCGA-ER-A3EV-06A 12 50 In-Frame Intra-chr q23.1 Transcription factor p12 Seq+ 46703 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND2A-PHF14 ZFAND2A chr7 1199600 - PHF14 chr7 11209043 + Exonic hg19 SKCM TCGA-ER-A3EV-06A 11 45 5'UTR-5'UTR Intra-chr p22.3 p21.3 Seq+ 46704 ChimerSeq STARFusion TCGA_RNA-Seq CUBN-ALDH16A1 CUBN chr10 17024483 - ALDH16A1 chr19 49961743 + Exonic hg19 SKCM TCGA-ER-A3EV-06A 14 25 5'UTR-CDS Inter-chr p13 q13.33 Seq+ 46705 ChimerSeq STARFusion TCGA_RNA-Seq DCAF8-ETV3 DCAF8 chr1 160206925 - ETV3 chr1 157106157 - Exonic hg19 SKCM TCGA-ER-A3EV-06A 9 20 CDS-5'UTR Intra-chr q23.2 q23.1 Transcription factor Seq+ 46706 ChimerSeq STARFusion TCGA_RNA-Seq ATXN1-CAP2 ATXN1 chr6 16486203 - CAP2 chr6 17551695 + Exonic hg19 SKCM TCGA-ER-A3EV-06A 3 31 5'UTR-CDS Intra-chr p22.3 p22.3 46707 ChimerSeq STARFusion TCGA_RNA-Seq ZMIZ1-BTD ZMIZ1 chr10 80921890 + BTD chr3 15676931 + Exonic hg19 SKCM TCGA-ER-A3EV-06A 4 25 5'UTR-CDS Inter-chr q22.3 p25.1 Seq+ 46708 ChimerSeq STARFusion TCGA_RNA-Seq JARID2-NEDD9 JARID2 chr6 15246815 + NEDD9 chr6 11306388 - Exonic hg19 SKCM TCGA-ER-A3EV-06A 4 6 CDS-5'UTR Intra-chr p22.3 p24.2 Seq+ 46709 ChimerSeq STARFusion TCGA_RNA-Seq RNF144B-KDM1B RNF144B chr6 18427916 + KDM1B chr6 18197288 + Exonic hg19 SKCM TCGA-ER-A3EV-06A 3 4 In-Frame Intra-chr p22.3 p22.3 Seq+ 46710 ChimerSeq STARFusion TCGA_RNA-Seq METTL5-MERTK METTL5 chr2 170676071 - MERTK chr2 112785928 + Exonic hg19 SKCM TCGA-ER-A3EV-06A 2 5 Out-of-frame Intra-chr q31.1 q13 Seq+ 46711 ChimerSeq STARFusion TCGA_RNA-Seq MED25-ST8SIA6 MED25 chr19 50322553 + ST8SIA6 chr10 17432619 - Exonic hg19 SKCM TCGA-ER-A3EV-06A 2 4 In-Frame Inter-chr q13.33 p12.33 Seq+ 46712 ChimerSeq STARFusion TCGA_RNA-Seq RAF1-TMEM40 RAF1 chr3 12705312 - TMEM40 chr3 12791339 - Exonic hg19 SKCM TCGA-ER-A3EV-06A 2 0 5'UTR-5'UTR Intra-chr p25.2 TKL:RAF Oncogene p25.2 Seq+ 46713 ChimerSeq STARFusion TCGA_RNA-Seq SEC22C-MRPS28 SEC22C chr3 42623685 - MRPS28 chr8 80831383 - Exonic hg19 SKCM TCGA-FS-A1ZZ-06A 32 183 5'UTR-CDS Inter-chr p22.1 q21.13 Seq+ 46714 ChimerSeq STARFusion TCGA_RNA-Seq SEC22C-MRPS28 SEC22C chr3 42623338 - MRPS28 chr8 80831383 - Exonic hg19 SKCM TCGA-FS-A1ZZ-06A 25 183 5'UTR-CDS Inter-chr p22.1 q21.13 Seq+ 46715 ChimerSeq STARFusion TCGA_RNA-Seq OXSR1-ATXN7 OXSR1 chr3 38232330 + ATXN7 chr3 63938055 + Exonic hg19 SKCM TCGA-FS-A1ZZ-06A 7 26 In-Frame Intra-chr p22.2 p14.1 Seq+ 46716 ChimerSeq STARFusion TCGA_RNA-Seq AHR-CUL4B AHR chr7 17338953 + CUL4B chrX 119708485 - Exonic hg19 SKCM TCGA-FS-A1ZZ-06A 5 23 CDS-5'UTR Inter-chr p21.1 Tumor suppressor gene Transcription factor q24 Seq+ 46717 ChimerSeq STARFusion TCGA_RNA-Seq AHR-CUL4B AHR chr7 17338953 + CUL4B chrX 119694480 - Exonic hg19 SKCM TCGA-FS-A1ZZ-06A 2 23 Out-of-frame Inter-chr p21.1 Tumor suppressor gene Transcription factor q24 Seq+ 46718 ChimerSeq STARFusion TCGA_RNA-Seq MRPS28-NKAIN3 MRPS28 chr8 80915234 - NKAIN3 chr8 63877913 + Exonic hg19 SKCM TCGA-FS-A1ZZ-06A 4 13 Out-of-frame Intra-chr q21.13 q12.3 Seq+ 46719 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-NKAIN3 TPD52 chr8 80915234 - NKAIN3 chr8 63877913 + Exonic hg19 SKCM TCGA-FS-A1ZZ-06A 4 12 Out-of-frame Intra-chr q21.13 q12.3 46720 ChimerSeq STARFusion TCGA_RNA-Seq ATXN7-SLC25A26 ATXN7 chr3 63938159 + SLC25A26 chr3 66271168 + Exonic hg19 SKCM TCGA-FS-A1ZZ-06A 2 17 CDS-5'UTR Intra-chr p14.1 Seq+ 46721 ChimerSeq STARFusion TCGA_RNA-Seq ARMCX5-GPRASP2 ARMCX5 chrX 101860581 + GPRASP2 chrX 101968710 + Exonic hg19 SKCM TCGA-FS-A1ZZ-06A 4 7 3'UTR-5'UTR Intra-chr q22.1 q22.1 46722 ChimerSeq STARFusion TCGA_RNA-Seq STEAP1B-RAPGEF5 STEAP1B chr7 22532184 - RAPGEF5 chr7 22357656 - Exonic hg19 SKCM TCGA-FS-A1ZZ-06A 3 11 CDS-5'UTR Intra-chr p15.3 p15.3 46723 ChimerSeq STARFusion TCGA_RNA-Seq ROBO1-THAP4 ROBO1 chr3 78763542 - THAP4 chr2 242545892 - Exonic hg19 SKCM TCGA-D9-A6EC-06A 58 212 Out-of-frame Inter-chr p12.3 Tumor suppressor gene q37.3 Transcription factor Seq+ 46724 ChimerSeq STARFusion TCGA_RNA-Seq ROBO1-THAP4 ROBO1 chr3 78742498 - THAP4 chr2 242545888 - Exonic hg19 SKCM TCGA-D9-A6EC-06A 6 203 In-Frame Inter-chr p12.3 Tumor suppressor gene q37.3 Transcription factor Seq+ 46725 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57733388 + VMP1 chr17 57886157 + Exonic hg19 SKCM TCGA-D9-A6EC-06A 12 39 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 46726 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57728677 + VMP1 chr17 57886157 + Exonic hg19 SKCM TCGA-D9-A6EC-06A 2 39 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 46727 ChimerSeq STARFusion TCGA_RNA-Seq STK24-MPC2 STK24 chr13 99228999 - MPC2 chr1 167893775 - Exonic hg19 SKCM TCGA-BF-AAP7-01A 26 29 Out-of-frame Inter-chr q32.2 q24.2 Seq+ 46728 ChimerSeq STARFusion TCGA_RNA-Seq PHGDH-HSD3BP5 PHGDH chr1 120284520 + HSD3BP5 chr1 120151052 + Exonic hg19 SKCM TCGA-EE-A2GR-06A 406 1639 Out-of-frame Intra-chr p12 p12 46729 ChimerSeq STARFusion TCGA_RNA-Seq PHGDH-HSD3BP5 PHGDH chr1 120284520 + HSD3BP5 chr1 120113879 + Exonic hg19 SKCM TCGA-EE-A2GR-06A 95 1446 Out-of-frame Intra-chr p12 p12 46730 ChimerSeq STARFusion TCGA_RNA-Seq MAN1A2-PDE4DIP MAN1A2 chr1 117911107 + PDE4DIP chr1 145021167 - Exonic hg19 SKCM TCGA-EE-A2GR-06A 32 228 In-Frame Intra-chr p12 q21.2 Oncogene Seq+ 46731 ChimerSeq STARFusion TCGA_RNA-Seq SBF2-CNTN5 SBF2 chr11 10215449 - CNTN5 chr11 100061858 + Exonic hg19 SKCM TCGA-EE-A2GR-06A 8 25 Out-of-frame Intra-chr p15.4 q22.1 Seq+ 46732 ChimerSeq STARFusion TCGA_RNA-Seq TATDN2-IRAK2 TATDN2 chr3 10312699 + IRAK2 chr3 10280432 + Exonic hg19 SKCM TCGA-EE-A2GR-06A 3 30 In-Frame Intra-chr p25.3 p25.3 TKL:IRAK Seq+ 46733 ChimerSeq STARFusion TCGA_RNA-Seq ARRB1-PRCP ARRB1 chr11 75062632 - PRCP chr11 82550467 - Exonic hg19 SKCM TCGA-EE-A2GR-06A 2 21 Out-of-frame Intra-chr q13.4 q14.1 Seq+ 46734 ChimerSeq STARFusion TCGA_RNA-Seq PMEL-PKD1P5 PMEL chr12 56351193 - PKD1P5 chr16 18481349 - Exonic hg19 SKCM TCGA-EE-A2GR-06A 6 2 Out-of-frame Inter-chr q13.2 p12.3 46735 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-LINC00511 SLC39A11 chr17 70943891 - LINC00511 chr17 70322087 - Exonic hg19 SKCM TCGA-D3-A8GC-06A 16 309 CDS-3'UTR Intra-chr q25.1 q24.3 46736 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-LINC00511 SLC39A11 chr17 70943870 - LINC00511 chr17 70322087 - Exonic hg19 SKCM TCGA-D3-A8GC-06A 10 307 CDS-3'UTR Intra-chr q25.1 q24.3 46737 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-LINC00511 SLC39A11 chr17 70943891 - LINC00511 chr17 70319461 - Exonic hg19 SKCM TCGA-D3-A8GC-06A 10 307 CDS-3'UTR Intra-chr q25.1 q24.3 46738 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-LINC00511 SLC39A11 chr17 70943869 - LINC00511 chr17 70319460 - Exonic hg19 SKCM TCGA-D3-A8GC-06A 8 307 Out-of-frame Intra-chr q25.1 q24.3 46739 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-LINC00511 SLC39A11 chr17 70943875 - LINC00511 chr17 70319466 - Exonic hg19 SKCM TCGA-D3-A8GC-06A 7 307 Out-of-frame Intra-chr q25.1 q24.3 46740 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-LINC00511 SLC39A11 chr17 70943873 - LINC00511 chr17 70322090 - Exonic hg19 SKCM TCGA-D3-A8GC-06A 5 307 Out-of-frame Intra-chr q25.1 q24.3 46741 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-LINC00511 SLC39A11 chr17 70943667 - LINC00511 chr17 70319461 - Exonic hg19 SKCM TCGA-D3-A8GC-06A 2 307 Out-of-frame Intra-chr q25.1 q24.3 46742 ChimerSeq STARFusion TCGA_RNA-Seq STAT3-PTRF STAT3 chr17 40498587 - PTRF chr17 40557406 - Exonic hg19 SKCM TCGA-D3-A8GC-06A 29 77 In-Frame Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor 46743 ChimerSeq STARFusion TCGA_RNA-Seq FAM129B-SNRNP25 FAM129B chr9 130279136 - SNRNP25 chr16 105777 + Exonic hg19 SKCM TCGA-D3-A8GC-06A 8 35 In-Frame Inter-chr q34.11 p13.3 Seq+ 46744 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-BRMS1 ANKRD11 chr16 89484692 - BRMS1 chr11 66109712 - Exonic hg19 SKCM TCGA-FR-A3YO-06A 58 235 5'UTR-5'UTR Inter-chr q24.3 q13.2 Tumor suppressor gene Seq+ 46745 ChimerSeq STARFusion TCGA_RNA-Seq BRMS1-LOC100507412 BRMS1 chr11 66112443 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 SKCM TCGA-FR-A3YO-06A 35 165 5'UTR-5'UTR Inter-chr q13.2 Tumor suppressor gene 46746 ChimerSeq STARFusion TCGA_RNA-Seq UBASH3B-GRIK4 UBASH3B chr11 122526918 + GRIK4 chr11 120823564 + Exonic hg19 SKCM TCGA-FR-A3YO-06A 5 37 Out-of-frame Intra-chr q24.1 q23.3 Seq+ 46747 ChimerSeq STARFusion TCGA_RNA-Seq UBASH3B-GRIK4 UBASH3B chr11 122526918 + GRIK4 chr11 120827489 + Exonic hg19 SKCM TCGA-FR-A3YO-06A 3 37 In-Frame Intra-chr q24.1 q23.3 Seq+ 46748 ChimerSeq STARFusion TCGA_RNA-Seq UBASH3B-GRIK4 UBASH3B chr11 122526918 + GRIK4 chr11 120831618 + Exonic hg19 SKCM TCGA-FR-A3YO-06A 2 37 In-Frame Intra-chr q24.1 q23.3 Seq+ 46749 ChimerSeq STARFusion TCGA_RNA-Seq PMEL-ERGIC3 PMEL chr12 56355406 - ERGIC3 chr20 34144744 + Exonic hg19 SKCM TCGA-FR-A3YO-06A 2 1 Out-of-frame Inter-chr q13.2 q11.22 46750 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-PIP5K1P1 KCTD20 chr6 36457999 + PIP5K1P1 chr6 7987766 + Exonic hg19 SKCM TCGA-WE-A8ZM-06A 26 0 Out-of-frame Intra-chr p21.31 p24.3 46751 ChimerSeq STARFusion TCGA_RNA-Seq VCL-ADK VCL chr10 75758133 + ADK chr10 76349040 + Exonic hg19 SKCM TCGA-WE-A8ZM-06A 10 53 In-Frame Intra-chr q22.2 q22.2 Seq+ 46752 ChimerSeq STARFusion TCGA_RNA-Seq VCL-ADK VCL chr10 75758133 + ADK chr10 76285014 + Exonic hg19 SKCM TCGA-WE-A8ZM-06A 5 52 In-Frame Intra-chr q22.2 q22.2 Seq+ 46753 ChimerSeq STARFusion TCGA_RNA-Seq CCDC50-LINC00882 CCDC50 chr3 191047512 + LINC00882 chr3 106848839 - Exonic hg19 SKCM TCGA-WE-A8ZM-06A 2 34 Out-of-frame Intra-chr q28 q13.12 46754 ChimerSeq STARFusion TCGA_RNA-Seq LUC7L2-IGSF22 LUC7L2 chr7 139092096 + IGSF22 chr11 18738547 - Exonic hg19 SKCM TCGA-WE-A8ZM-06A 3 30 Out-of-frame Inter-chr q34 p15.1 Seq+ 46755 ChimerSeq STARFusion TCGA_RNA-Seq CPEB1-CRTC3 CPEB1 chr15 83315888 - CRTC3 chr15 91147617 + Exonic hg19 SKCM TCGA-WE-A8ZM-06A 3 26 5'UTR-CDS Intra-chr q25.2 Transcription factor q26.1 Seq+ 46756 ChimerSeq STARFusion TCGA_RNA-Seq UNC45A-RALGAPB UNC45A chr15 91493845 + RALGAPB chr20 37179714 + Exonic hg19 SKCM TCGA-WE-A8ZM-06A 4 9 Out-of-frame Inter-chr q26.1 q11.23 Seq+ 46757 ChimerSeq STARFusion TCGA_RNA-Seq CAPN3-STARD9 CAPN3 chr15 42702211 + STARD9 chr15 43005719 + Exonic hg19 SKCM TCGA-WE-A8ZM-06A 3 7 Out-of-frame Intra-chr q15.1 q15.2 46758 ChimerSeq STARFusion TCGA_RNA-Seq ASMTL-P2RY8 ASMTL chrY 1503915 - P2RY8 chrX 1585475 - Exonic hg19 SKCM TCGA-D3-A5GO-06A 2 7 CDS-5'UTR Inter-chr p22.33 p22.33 Seq+ 46759 ChimerSeq STARFusion TCGA_RNA-Seq CHD8-NDRG2 CHD8 chr14 21924191 - NDRG2 chr14 21491480 - Exonic hg19 SKCM TCGA-WE-A8ZX-06A 4 14 5'UTR-5'UTR Intra-chr q11.2 q11.2 Tumor suppressor gene Seq+ 46760 ChimerSeq STARFusion TCGA_RNA-Seq SLC2A13-FAM186A SLC2A13 chr12 40499055 - FAM186A chr12 50727886 - Exonic hg19 SKCM TCGA-WE-A8ZX-06A 4 9 Out-of-frame Intra-chr q12 q13.12 Seq+ 46761 ChimerSeq STARFusion TCGA_RNA-Seq MIPOL1-SCFD1 MIPOL1 chr14 37739730 + SCFD1 chr14 31118734 + Exonic hg19 SKCM TCGA-WE-A8ZX-06A 3 5 In-Frame Intra-chr q13.3 q12 Seq+ 46762 ChimerSeq STARFusion TCGA_RNA-Seq MITF-MORC1 MITF chr3 69928534 + MORC1 chr3 108788604 - Exonic hg19 SKCM TCGA-WE-A8ZX-06A 2 5 Out-of-frame Intra-chr p13 Oncogene Transcription factor q13.13 Seq+ 46763 ChimerSeq STARFusion TCGA_RNA-Seq PDZD8-ENO4 PDZD8 chr10 119078383 - ENO4 chr10 118615134 + Exonic hg19 SKCM TCGA-DA-A1I8-06A 21 62 In-Frame Intra-chr q26.11 q25.3 Seq+ 46764 ChimerSeq STARFusion TCGA_RNA-Seq PDZD8-ENO4 PDZD8 chr10 119078383 - ENO4 chr10 118616003 + Exonic hg19 SKCM TCGA-DA-A1I8-06A 4 62 In-Frame Intra-chr q26.11 q25.3 Seq+ 46765 ChimerSeq STARFusion TCGA_RNA-Seq PDZD8-ENO4 PDZD8 chr10 119078383 - ENO4 chr10 118628161 + Exonic hg19 SKCM TCGA-DA-A1I8-06A 4 62 In-Frame Intra-chr q26.11 q25.3 Seq+ 46766 ChimerSeq STARFusion TCGA_RNA-Seq DUSP22-CECR5 DUSP22 chr6 311962 + CECR5 chr22 17630635 - Exonic hg19 SKCM TCGA-DA-A1I8-06A 3 13 In-Frame Inter-chr p25.3 Tumor suppressor gene Seq+ 46767 ChimerSeq STARFusion TCGA_RNA-Seq LY6E-PSMD1 LY6E chr8 144103232 + PSMD1 chr2 232037359 + Exonic hg19 SKCM TCGA-DA-A1I8-06A 3 1 Out-of-frame Inter-chr q37.1 46768 ChimerSeq STARFusion TCGA_RNA-Seq CPQ-SDC2 CPQ chr8 97892233 + SDC2 chr8 97605708 + Exonic hg19 SKCM TCGA-DA-A1I8-06A 2 0 In-Frame Intra-chr q22.1 q22.1 46769 ChimerSeq STARFusion TCGA_RNA-Seq APBB1IP-DNAJC1 APBB1IP chr10 26830621 + DNAJC1 chr10 22218070 - Exonic hg19 SKCM TCGA-ER-A196-01A 22 54 In-Frame Intra-chr p12.1 p12.31 Seq+ 46770 ChimerSeq STARFusion TCGA_RNA-Seq FRMD4A-APBB1IP FRMD4A chr10 13716911 - APBB1IP chr10 26800676 + Exonic hg19 SKCM TCGA-ER-A196-01A 13 60 In-Frame Intra-chr p13 p12.1 Seq+ 46771 ChimerSeq STARFusion TCGA_RNA-Seq VAC14-CDH8 VAC14 chr16 70765398 - CDH8 chr16 61935377 - Exonic hg19 SKCM TCGA-ER-A196-01A 9 36 Out-of-frame Intra-chr q22.2 q21 Seq+ 46772 ChimerSeq STARFusion TCGA_RNA-Seq CSTF1-BLM CSTF1 chr20 54967871 + BLM chr15 91352367 + Exonic hg19 SKCM TCGA-ER-A196-01A 7 25 5'UTR-CDS Inter-chr q13.2 q26.1 Oncogene Tumor suppressor gene Seq+ 46773 ChimerSeq STARFusion TCGA_RNA-Seq CSTF1-BLM CSTF1 chr20 54967769 + BLM chr15 91352367 + Exonic hg19 SKCM TCGA-ER-A196-01A 6 25 5'UTR-CDS Inter-chr q13.2 q26.1 Oncogene Tumor suppressor gene Seq+ 46774 ChimerSeq STARFusion TCGA_RNA-Seq ADNP-BMP7 ADNP chr20 49547363 - BMP7 chr20 55803477 - Exonic hg19 SKCM TCGA-ER-A196-01A 9 5 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.31 Seq+ 46775 ChimerSeq STARFusion TCGA_RNA-Seq CSTF1-BLM CSTF1 chr20 54967594 + BLM chr15 91352367 + Exonic hg19 SKCM TCGA-ER-A196-01A 3 25 5'UTR-CDS Inter-chr q13.2 q26.1 Oncogene Tumor suppressor gene Seq+ 46776 ChimerSeq STARFusion TCGA_RNA-Seq PFKFB3-ZNF831 PFKFB3 chr10 6259154 + ZNF831 chr20 57828033 + Exonic hg19 SKCM TCGA-ER-A196-01A 3 23 Out-of-frame Inter-chr p15.1 q13.32 Transcription factor Seq+ 46777 ChimerSeq STARFusion TCGA_RNA-Seq DYM-TMC7 DYM chr18 46783380 - TMC7 chr16 19051611 + Exonic hg19 SKCM TCGA-ER-A196-01A 3 16 Out-of-frame Inter-chr q21.1 p12.3 Seq+ 46778 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983374 - RSRC2 chr12 122990253 - Exonic hg19 SKCM TCGA-BF-AAP8-01A 29 109 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 46779 ChimerSeq STARFusion TCGA_RNA-Seq ZFP90-CBFB ZFP90 chr16 68573728 + CBFB chr16 67116116 + Exonic hg19 SKCM TCGA-WE-A8ZQ-06A 2 10 In-Frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 46780 ChimerSeq STARFusion TCGA_RNA-Seq CEP170-AKT3 CEP170 chr1 243349081 - AKT3 chr1 243736350 - Exonic hg19 SKCM TCGA-FS-A1ZD-06A 23 45 In-Frame Intra-chr AGC:Akt Oncogene Seq+ 46781 ChimerSeq STARFusion TCGA_RNA-Seq INPP5F-GRK5 INPP5F chr10 121485871 + GRK5 chr10 121140327 + Exonic hg19 SKCM TCGA-FS-A1ZD-06A 17 42 In-Frame Intra-chr q26.11 q26.11 Seq+ 46782 ChimerSeq STARFusion TCGA_RNA-Seq CALM3-CHRNA4 CALM3 chr19 47104694 + CHRNA4 chr20 61975738 - Exonic hg19 SKCM TCGA-FS-A1ZD-06A 7 47 CDS-3'UTR Inter-chr q13.32 q13.33 Seq+ 46783 ChimerSeq STARFusion TCGA_RNA-Seq CEP170-AKT3 CEP170 chr1 243349561 - AKT3 chr1 243736350 - Exonic hg19 SKCM TCGA-FS-A1ZD-06A 6 45 In-Frame Intra-chr AGC:Akt Oncogene Seq+ 46784 ChimerSeq STARFusion TCGA_RNA-Seq CD55-CENPL CD55 chr1 207510163 + CENPL chr1 173780444 - Exonic hg19 SKCM TCGA-FS-A1ZD-06A 7 20 CDS-5'UTR Intra-chr q32.2 q25.1 Seq+ 46785 ChimerSeq STARFusion TCGA_RNA-Seq AHCTF1-SMYD3 AHCTF1 chr1 247019032 - SMYD3 chr1 246093239 - Exonic hg19 SKCM TCGA-FS-A1ZD-06A 4 31 Out-of-frame Intra-chr q44 Transcription factor q44 Transcription factor 46786 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R2-TRABD PPP6R2 chr22 50781979 + TRABD chr22 50631456 + Exonic hg19 SKCM TCGA-FS-A1ZD-06A 5 25 5'UTR-5'UTR Intra-chr q13.33 q13.33 Seq+ 46787 ChimerSeq STARFusion TCGA_RNA-Seq SH3D19-INPP4B SH3D19 chr4 152147199 - INPP4B chr4 143352538 - Exonic hg19 SKCM TCGA-FS-A1ZD-06A 5 19 5'UTR-5'UTR Intra-chr q31.3 q31.21 Tumor suppressor gene Seq+ 46788 ChimerSeq STARFusion TCGA_RNA-Seq PPARA-BCL2L13 PPARA chr22 46547873 + BCL2L13 chr22 18165980 + Exonic hg19 SKCM TCGA-BF-AAOX-01A 3 22 5'UTR-CDS Intra-chr q13.31 Tumor suppressor gene Transcription factor q11.21 Seq+ 46789 ChimerSeq STARFusion TCGA_RNA-Seq MFSD12-NPEPPS MFSD12 chr19 3538539 - NPEPPS chr17 45646783 + Exonic hg19 SKCM TCGA-BF-AAOX-01A 3 9 3'UTR-CDS Inter-chr p13.3 q21.32 Seq+ 46790 ChimerSeq STARFusion TCGA_RNA-Seq TRIM26-TJAP1 TRIM26 chr6 30181082 - TJAP1 chr6 43465619 + Exonic hg19 SKCM TCGA-FS-A1ZN-01A 17 23 5'UTR-5'UTR Intra-chr p21.1 Seq+ 46791 ChimerSeq STARFusion TCGA_RNA-Seq TRIM26-TJAP1 TRIM26 chr6 30172433 - TJAP1 chr6 43465619 + Exonic hg19 SKCM TCGA-FS-A1ZN-01A 2 22 5'UTR-5'UTR Intra-chr p21.1 Seq+ 46792 ChimerSeq STARFusion TCGA_RNA-Seq MTMR3-EMID1 MTMR3 chr22 30279348 + EMID1 chr22 29610915 + Exonic hg19 SKCM TCGA-D3-A8GJ-06A 13 11 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 46793 ChimerSeq STARFusion TCGA_RNA-Seq LOC100128675-LGI4 LOC100128675 chr19 35597133 - LGI4 chr19 35622946 - Exonic hg19 SKCM TCGA-D3-A8GJ-06A 2 0 3'UTR-CDS Intra-chr q13.12 46794 ChimerSeq STARFusion TCGA_RNA-Seq ERC1-METTL4 ERC1 chr12 1346070 + METTL4 chr18 2567653 - Exonic hg19 SKCM TCGA-D3-A1Q9-06A 57 230 5'UTR-5'UTR Inter-chr p11.32 Seq+ 46795 ChimerSeq STARFusion TCGA_RNA-Seq RBM39-EDEM2 RBM39 chr20 34326890 - EDEM2 chr20 33719586 - Exonic hg19 SKCM TCGA-D3-A1Q9-06A 8 99 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 46796 ChimerSeq STARFusion TCGA_RNA-Seq RBM39-EDEM2 RBM39 chr20 34326412 - EDEM2 chr20 33719586 - Exonic hg19 SKCM TCGA-D3-A1Q9-06A 6 99 3'UTR-3'UTR Intra-chr q11.22 q11.22 Seq+ 46797 ChimerSeq STARFusion TCGA_RNA-Seq KDM5A-IQSEC3 KDM5A chr12 442653 - IQSEC3 chr12 266191 + Exonic hg19 SKCM TCGA-D3-A1Q9-06A 2 34 Out-of-frame Intra-chr p13.33 Tumor suppressor gene Seq+ 46798 ChimerSeq STARFusion TCGA_RNA-Seq POFUT1-PRICKLE2 POFUT1 chr20 30804524 + PRICKLE2 chr3 64184643 - Exonic hg19 SKCM TCGA-D3-A1Q9-06A 3 13 CDS-5'UTR Inter-chr q11.21 p14.1 Seq+ 46799 ChimerSeq STARFusion TCGA_RNA-Seq BSG-PMEL BSG chr19 572701 + PMEL chr12 56349647 - Exonic hg19 SKCM TCGA-D3-A1Q9-06A 2 12 In-Frame Inter-chr p13.3 q13.2 46800 ChimerSeq STARFusion TCGA_RNA-Seq CD9-C6 CD9 chr12 6334700 + C6 chr5 41186310 - Exonic hg19 SKCM TCGA-D3-A1Q9-06A 2 5 Out-of-frame Inter-chr p13.31 p13.1 Seq+ 46801 ChimerSeq STARFusion TCGA_RNA-Seq NPHP4-CDKN2A NPHP4 chr1 6046215 - CDKN2A chr9 21971207 - Exonic hg19 SKCM TCGA-EE-A20H-06A 51 217 In-Frame Inter-chr p36.31 p21.3 Oncogene Tumor suppressor gene Seq+ 46802 ChimerSeq STARFusion TCGA_RNA-Seq DLG1-TFRC DLG1 chr3 196869589 - TFRC chr3 195782127 - Exonic hg19 SKCM TCGA-EE-A20H-06A 9 30 In-Frame Intra-chr q29 Tumor suppressor gene q29 46803 ChimerSeq STARFusion TCGA_RNA-Seq PARP8-LOC283335 PARP8 chr5 49963959 + LOC283335 chr12 53439845 - Exonic hg19 SKCM TCGA-EE-A20H-06A 2 53 CDS-3'UTR Inter-chr q11.1 46804 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC17-GLIPR1L1 ZDHHC17 chr12 77158109 + GLIPR1L1 chr12 75756882 + Exonic hg19 SKCM TCGA-EE-A2MS-06A 57 124 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 46805 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM2-INHBE R3HDM2 chr12 57660514 - INHBE chr12 57849527 + Exonic hg19 SKCM TCGA-EE-A2MS-06A 15 124 In-Frame Intra-chr q13.3 q13.3 Seq+ 46806 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC17-GLIPR1L1 ZDHHC17 chr12 77158109 + GLIPR1L1 chr12 75741402 + Exonic hg19 SKCM TCGA-EE-A2MS-06A 13 124 In-Frame Intra-chr q21.2 q21.2 Seq+ 46807 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC17-GLIPR1L1 ZDHHC17 chr12 77158109 + GLIPR1L1 chr12 75737473 + Exonic hg19 SKCM TCGA-EE-A2MS-06A 12 124 In-Frame Intra-chr q21.2 q21.2 Seq+ 46808 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM2-INHBE R3HDM2 chr12 57660514 - INHBE chr12 57849151 + Exonic hg19 SKCM TCGA-EE-A2MS-06A 9 124 CDS-5'UTR Intra-chr q13.3 q13.3 Seq+ 46809 ChimerSeq STARFusion TCGA_RNA-Seq ERGIC1-GPR98 ERGIC1 chr5 172359539 + GPR98 chr5 90083888 + Exonic hg19 SKCM TCGA-EE-A2MS-06A 17 74 In-Frame Intra-chr q35.1 Seq+ 46810 ChimerSeq STARFusion TCGA_RNA-Seq LYST-NID1 LYST chr1 235950500 - NID1 chr1 236212289 - Exonic hg19 SKCM TCGA-EE-A2MS-06A 14 76 Out-of-frame Intra-chr q42.3 q42.3 Seq+ 46811 ChimerSeq STARFusion TCGA_RNA-Seq SH3KBP1-VSIG1 SH3KBP1 chrX 19854243 - VSIG1 chrX 107301268 + Exonic hg19 SKCM TCGA-EE-A2MS-06A 17 37 Out-of-frame Intra-chr p22.12 q22.3 Seq+ 46812 ChimerSeq STARFusion TCGA_RNA-Seq SH3KBP1-VSIG1 SH3KBP1 chrX 19854269 - VSIG1 chrX 107301268 + Exonic hg19 SKCM TCGA-EE-A2MS-06A 6 37 Out-of-frame Intra-chr p22.12 q22.3 Seq+ 46813 ChimerSeq STARFusion TCGA_RNA-Seq CRTC3-IQGAP1 CRTC3 chr15 91083369 + IQGAP1 chr15 90982564 + Exonic hg19 SKCM TCGA-EE-A2MS-06A 4 27 Out-of-frame Intra-chr q26.1 q26.1 Seq+ 46814 ChimerSeq STARFusion TCGA_RNA-Seq DMXL2-PTPRR DMXL2 chr15 51914656 - PTPRR chr12 71158558 - Exonic hg19 SKCM TCGA-EE-A2MS-06A 4 23 In-Frame Inter-chr q21.2 q15 Seq+ 46815 ChimerSeq STARFusion TCGA_RNA-Seq PTPRR-C12orf54 PTPRR chr12 71158445 - C12orf54 chr12 48880471 + Exonic hg19 SKCM TCGA-EE-A2MS-06A 3 27 In-Frame Intra-chr q15 q13.11 Seq+ 46816 ChimerSeq STARFusion TCGA_RNA-Seq PTPRR-C12orf54 PTPRR chr12 71158445 - C12orf54 chr12 48879961 + Exonic hg19 SKCM TCGA-EE-A2MS-06A 3 27 Out-of-frame Intra-chr q15 q13.11 Seq+ 46817 ChimerSeq STARFusion TCGA_RNA-Seq TMEM117-MCRS1 TMEM117 chr12 44238731 + MCRS1 chr12 49959998 - Exonic hg19 SKCM TCGA-EE-A2MS-06A 3 5 In-Frame Intra-chr q12 q13.12 Seq+ 46818 ChimerSeq STARFusion TCGA_RNA-Seq CLSTN1-CTNNBIP1 CLSTN1 chr1 9883701 - CTNNBIP1 chr1 9932146 - Exonic hg19 SKCM TCGA-EE-A2MS-06A 3 4 CDS-5'UTR Intra-chr p36.22 p36.22 Tumor suppressor gene Seq+ 46819 ChimerSeq STARFusion TCGA_RNA-Seq ARL16-RAB37 ARL16 chr17 79650566 - RAB37 chr17 72725395 + Exonic hg19 SKCM TCGA-EE-A2MS-06A 2 4 In-Frame Intra-chr q25.3 q25.1 Seq+ 46820 ChimerSeq STARFusion TCGA_RNA-Seq NAV2-ARL14EP NAV2 chr11 19735508 + ARL14EP chr11 30352433 + Exonic hg19 SKCM TCGA-WE-A8ZR-06A 18 202 Out-of-frame Intra-chr p15.1 p14.1 Seq+ 46821 ChimerSeq STARFusion TCGA_RNA-Seq NAV2-ARL14EP NAV2 chr11 19735379 + ARL14EP chr11 30352433 + Exonic hg19 SKCM TCGA-WE-A8ZR-06A 15 187 Out-of-frame Intra-chr p15.1 p14.1 Seq+ 46822 ChimerSeq STARFusion TCGA_RNA-Seq NAV2-ARL14EP NAV2 chr11 19735379 + ARL14EP chr11 30354413 + Exonic hg19 SKCM TCGA-WE-A8ZR-06A 12 187 Out-of-frame Intra-chr p15.1 p14.1 Seq+ 46823 ChimerSeq STARFusion TCGA_RNA-Seq NAV2-ARL14EP NAV2 chr11 19735508 + ARL14EP chr11 30354413 + Exonic hg19 SKCM TCGA-WE-A8ZR-06A 7 187 Out-of-frame Intra-chr p15.1 p14.1 Seq+ 46824 ChimerSeq STARFusion TCGA_RNA-Seq GBE1-FAM19A1 GBE1 chr3 81643059 - FAM19A1 chr3 68466430 + Exonic hg19 SKCM TCGA-WE-A8ZR-06A 4 17 In-Frame Intra-chr p12.2 p14.1 Seq+ 46825 ChimerSeq STARFusion TCGA_RNA-Seq GUCY1B2-ADSL GUCY1B2 chr13 51578389 - ADSL chr22 40749077 + Exonic hg19 SKCM TCGA-WE-A8ZR-06A 2 19 3'UTR-CDS Inter-chr q14.3 q13.1 Seq+ 46826 ChimerSeq STARFusion TCGA_RNA-Seq UFD1L-GUCY1B2 UFD1L chr22 19462591 - GUCY1B2 chr13 51622450 - Exonic hg19 SKCM TCGA-WE-A8ZR-06A 4 9 CDS-3'UTR Inter-chr q14.3 Seq+ 46827 ChimerSeq STARFusion TCGA_RNA-Seq FRMD4B-ABCA5 FRMD4B chr3 69336903 - ABCA5 chr17 67252424 - Exonic hg19 SKCM TCGA-WE-A8ZR-06A 2 15 Out-of-frame Inter-chr p14.1 q24.3 Seq+ 46828 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V1G1-COL5A1 ATP6V1G1 chr9 117350200 + COL5A1 chr9 137655539 + Exonic hg19 SKCM TCGA-WE-A8ZR-06A 3 5 Out-of-frame Intra-chr q32 q34.3 Seq+ 46829 ChimerSeq STARFusion TCGA_RNA-Seq NUCKS1-RAB7L1 NUCKS1 chr1 205719085 - RAB7L1 chr1 205740781 - Exonic hg19 SKCM TCGA-D3-A1QB-06A 24 61 Out-of-frame Intra-chr q32.1 Seq+ 46830 ChimerSeq STARFusion TCGA_RNA-Seq PCBP2-IGH@ PCBP2 chr12 53853821 + IGH@ chr14 106330846 - Exonic hg19 SKCM TCGA-D3-A1QB-06A 15 2 Out-of-frame Inter-chr q13.13 32.33 46831 ChimerSeq STARFusion TCGA_RNA-Seq PCBP2-IGHG3 PCBP2 chr12 53853821 + IGHG3 chr14 106330846 - Exonic hg19 SKCM TCGA-D3-A1QB-06A 15 1 Out-of-frame Inter-chr q13.13 46832 ChimerSeq STARFusion TCGA_RNA-Seq SHANK1-IGH@ SHANK1 chr19 51171268 - IGH@ chr14 106329449 - Exonic hg19 SKCM TCGA-D3-A1QB-06A 10 0 Out-of-frame Inter-chr q13.33 32.33 46833 ChimerSeq STARFusion TCGA_RNA-Seq SHANK1-IGHJ6 SHANK1 chr19 51171268 - IGHJ6 chr14 106329449 - Exonic hg19 SKCM TCGA-D3-A1QB-06A 10 0 Out-of-frame Inter-chr q13.33 Seq+ 46834 ChimerSeq STARFusion TCGA_RNA-Seq SHANK1-IGHG3 SHANK1 chr19 51171268 - IGHG3 chr14 106329449 - Exonic hg19 SKCM TCGA-D3-A1QB-06A 9 0 Out-of-frame Inter-chr q13.33 46835 ChimerSeq STARFusion TCGA_RNA-Seq STEAP1B-RAPGEF5 STEAP1B chr7 22532184 - RAPGEF5 chr7 22357656 - Exonic hg19 SKCM TCGA-ER-A42H-01A 5 24 CDS-5'UTR Intra-chr p15.3 p15.3 46836 ChimerSeq STARFusion TCGA_RNA-Seq CMTM7-CLDN11 CMTM7 chr3 32433557 + CLDN11 chr3 170425833 + Exonic hg19 SKCM TCGA-ER-A42H-01A 7 11 CDS-3'UTR Intra-chr p22.3 q26.2 Seq+ 46837 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 SKCM TCGA-ER-A42H-01A 4 10 CDS-5'UTR Intra-chr p12 p12 Transcription factor 46838 ChimerSeq STARFusion TCGA_RNA-Seq MINOS1-PQLC2 MINOS1 chr1 19923603 + PQLC2 chr1 19651127 + Exonic hg19 SKCM TCGA-ER-A19G-06A 46 152 Out-of-frame Intra-chr p36.13 p36.13 Seq+ 46839 ChimerSeq STARFusion TCGA_RNA-Seq KMT2A-TMEM25 KMT2A chr11 118307659 + TMEM25 chr11 118416834 + Exonic hg19 SKCM TCGA-ER-A19G-06A 5 11 Out-of-frame Intra-chr q23.3 Oncogene Transcription factor q23.3 46840 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-NUP107 CPSF6 chr12 69656342 + NUP107 chr12 69126417 + Exonic hg19 SKCM TCGA-ER-A19G-06A 2 20 3'UTR-CDS Intra-chr q15 q15 Seq+ 46841 ChimerSeq STARFusion TCGA_RNA-Seq AXIN1-NPRL3 AXIN1 chr16 396148 - NPRL3 chr16 169254 - Exonic hg19 SKCM TCGA-D3-A8GI-06A 2 9 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 46842 ChimerSeq STARFusion TCGA_RNA-Seq MIPEP-CHMP1A MIPEP chr13 24460472 - CHMP1A chr16 89713739 - Exonic hg19 SKCM TCGA-EE-A2GS-06A 2 0 In-Frame Inter-chr q12.12 q24.3 46843 ChimerSeq STARFusion TCGA_RNA-Seq PRPF4B-F13A1 PRPF4B chr6 4021700 + F13A1 chr6 6197559 - Exonic hg19 SKCM TCGA-GN-A264-06A 162 223 In-Frame Intra-chr p25.2 p25.1 Seq+ 46844 ChimerSeq STARFusion TCGA_RNA-Seq HDAC4-PDE11A HDAC4 chr2 240274373 - PDE11A chr2 178769914 - Exonic hg19 SKCM TCGA-GN-A264-06A 5 32 Out-of-frame Intra-chr q37.3 q31.2 Seq+ 46845 ChimerSeq STARFusion TCGA_RNA-Seq GFOD2-TRIO GFOD2 chr16 67753066 - TRIO chr5 14270934 + Exonic hg19 SKCM TCGA-GN-A264-06A 6 25 5'UTR-CDS Inter-chr q22.1 p15.2 Seq+ 46846 ChimerSeq STARFusion TCGA_RNA-Seq STEAP1B-RAPGEF5 STEAP1B chr7 22532184 - RAPGEF5 chr7 22357656 - Exonic hg19 SKCM TCGA-GN-A264-06A 4 19 CDS-5'UTR Intra-chr p15.3 p15.3 46847 ChimerSeq STARFusion TCGA_RNA-Seq PMEL-PKD1P5 PMEL chr12 56351193 - PKD1P5 chr16 18481349 - Exonic hg19 SKCM TCGA-GN-A264-06A 8 2 Out-of-frame Inter-chr q13.2 p12.3 46848 ChimerSeq STARFusion TCGA_RNA-Seq MFF-PLEKHM3 MFF chr2 228205096 + PLEKHM3 chr2 208841544 - Exonic hg19 SKCM TCGA-GN-A264-06A 3 15 Out-of-frame Intra-chr q36.3 q33.3 46849 ChimerSeq STARFusion TCGA_RNA-Seq FMNL3-CPNE8 FMNL3 chr12 50100838 - CPNE8 chr12 39071356 - Exonic hg19 SKCM TCGA-GN-A264-06A 3 8 Out-of-frame Intra-chr q13.12 q12 Seq+ 46850 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-SPEF2 NIPBL chr5 37046301 + SPEF2 chr5 35641533 + Exonic hg19 SKCM TCGA-GN-A264-06A 2 8 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 46851 ChimerSeq STARFusion TCGA_RNA-Seq ACOT7-NPHP4 ACOT7 chr1 6409809 - NPHP4 chr1 5993389 - Exonic hg19 SKCM TCGA-FS-A4F0-06A 3 16 In-Frame Intra-chr p36.31 p36.31 Seq+ 46852 ChimerSeq STARFusion TCGA_RNA-Seq SHC1-COL6A2 SHC1 chr1 154940147 - COL6A2 chr21 47549110 + Exonic hg19 SKCM TCGA-EE-A2GE-06A 2 2 Out-of-frame Inter-chr q21.3 q22.3 Seq+ 46853 ChimerSeq STARFusion TCGA_RNA-Seq FTL-IGH@ FTL chr19 49468679 + IGH@ chr14 106174416 - Exonic hg19 SKCM TCGA-D3-A51F-06A 3 7 Out-of-frame Inter-chr q13.33 32.33 46854 ChimerSeq STARFusion TCGA_RNA-Seq LARP4-TMBIM6 LARP4 chr12 50794811 + TMBIM6 chr12 50146247 + Exonic hg19 SKCM TCGA-FS-A1Z4-06A 120 312 In-Frame Intra-chr q13.12 q13.12 Seq+ 46855 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K8-LYZL2 MAP3K8 chr10 30748430 + LYZL2 chr10 30900953 - Exonic hg19 SKCM TCGA-FS-A1Z4-06A 60 167 Out-of-frame Intra-chr p11.23 STE:STE11 Tumor suppressor gene p11.23 Seq+ 46856 ChimerSeq STARFusion TCGA_RNA-Seq GABRG1-DHX8 GABRG1 chr4 46125827 - DHX8 chr17 41566817 + Exonic hg19 SKCM TCGA-FS-A1Z4-06A 18 76 Out-of-frame Inter-chr p12 q21.31 Seq+ 46857 ChimerSeq STARFusion TCGA_RNA-Seq PDDC1-ALOX5AP PDDC1 chr11 767294 - ALOX5AP chr13 31326189 + Exonic hg19 SKCM TCGA-FS-A1Z4-06A 11 78 3'UTR-CDS Inter-chr q12.3 Seq+ 46858 ChimerSeq STARFusion TCGA_RNA-Seq PDDC1-ALOX5AP PDDC1 chr11 770993 - ALOX5AP chr13 31326189 + Exonic hg19 SKCM TCGA-FS-A1Z4-06A 10 75 In-Frame Inter-chr q12.3 Seq+ 46859 ChimerSeq STARFusion TCGA_RNA-Seq FMN1-KANSL1 FMN1 chr15 33357158 - KANSL1 chr17 44249598 - Exonic hg19 SKCM TCGA-FS-A1Z4-06A 19 24 CDS-5'UTR Inter-chr Seq+ 46860 ChimerSeq STARFusion TCGA_RNA-Seq PDDC1-ALOX5AP PDDC1 chr11 767188 - ALOX5AP chr13 31326189 + Exonic hg19 SKCM TCGA-FS-A1Z4-06A 4 75 3'UTR-CDS Inter-chr q12.3 Seq+ 46861 ChimerSeq STARFusion TCGA_RNA-Seq PDDC1-ALOX5AP PDDC1 chr11 772427 - ALOX5AP chr13 31326189 + Exonic hg19 SKCM TCGA-FS-A1Z4-06A 2 75 Out-of-frame Inter-chr q12.3 Seq+ 46862 ChimerSeq STARFusion TCGA_RNA-Seq GON4L-MED27 GON4L chr1 155740858 - MED27 chr9 134769379 - Exonic hg19 SKCM TCGA-FS-A1Z4-06A 6 40 In-Frame Inter-chr q22 q34.13 Seq+ 46863 ChimerSeq STARFusion TCGA_RNA-Seq ILF3-OR1M1 ILF3 chr19 10789868 + OR1M1 chr19 9203908 + Exonic hg19 SKCM TCGA-FS-A1Z4-06A 5 32 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 46864 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R37-APOC4 PPP1R37 chr19 45596785 + APOC4 chr19 45451723 + Exonic hg19 SKCM TCGA-FS-A1Z4-06A 3 23 CDS-3'UTR Intra-chr q13.32 q13.32 46865 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-FMN1 KANSL1 chr17 44270189 - FMN1 chr15 33384404 - Exonic hg19 SKCM TCGA-FS-A1Z4-06A 5 9 5'UTR-5'UTR Inter-chr Seq+ 46866 ChimerSeq STARFusion TCGA_RNA-Seq NOS1AP-POM121C NOS1AP chr1 162270496 + POM121C chr7 75048725 - Exonic hg19 SKCM TCGA-FS-A1Z4-06A 6 4 Out-of-frame Inter-chr q23.3 q11.23 Seq+ 46867 ChimerSeq STARFusion TCGA_RNA-Seq ARRB1-GDPD5 ARRB1 chr11 75062632 - GDPD5 chr11 75173934 - Exonic hg19 SKCM TCGA-FS-A1Z4-06A 3 13 Out-of-frame Intra-chr q13.4 q13.5 Seq+ 46868 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R37-APOC2 PPP1R37 chr19 45596785 + APOC2 chr19 45451723 + Exonic hg19 SKCM TCGA-FS-A1Z4-06A 3 11 CDS-5'UTR Intra-chr q13.32 q13.32 46869 ChimerSeq STARFusion TCGA_RNA-Seq ODF2L-F8 ODF2L chr1 86861716 - F8 chrX 154159951 - Exonic hg19 SKCM TCGA-FS-A1Z4-06A 2 10 5'UTR-CDS Inter-chr p22.3 q28 Seq+ 46870 ChimerSeq STARFusion TCGA_RNA-Seq JAK2-DOCK8 JAK2 chr9 5055788 + DOCK8 chr9 286461 + Exonic hg19 SKCM TCGA-WE-A8ZN-06A 3 14 In-Frame Intra-chr p24.1 TK:JakA Oncogene p24.3 Seq+ 46871 ChimerSeq STARFusion TCGA_RNA-Seq PRCP-DLG2 PRCP chr11 82564219 - DLG2 chr11 83810090 - Exonic hg19 SKCM TCGA-FS-A1ZS-06A 2 16 In-Frame Intra-chr q14.1 q14.1 Seq+ 46872 ChimerSeq STARFusion TCGA_RNA-Seq COL7A1-CD59 COL7A1 chr3 48623854 - CD59 chr11 33744013 - Exonic hg19 SKCM TCGA-FS-A1ZS-06A 4 5 Out-of-frame Inter-chr p21.31 p13 46873 ChimerSeq STARFusion TCGA_RNA-Seq TYR-MXI1 TYR chr11 88924586 + MXI1 chr10 111987947 + Exonic hg19 SKCM TCGA-ER-A19F-06A 2 5 In-Frame Inter-chr q14.3 q25.2 Tumor suppressor gene Transcription factor 46874 ChimerSeq STARFusion TCGA_RNA-Seq TMEM248-SBDS TMEM248 chr7 66416122 + SBDS chr7 66460377 - Exonic hg19 SKCM TCGA-EE-A2M7-06A 20 266 Out-of-frame Intra-chr q11.21 q11.21 Oncogene Seq+ 46875 ChimerSeq STARFusion TCGA_RNA-Seq MGAT4B-ETF1 MGAT4B chr5 179233487 - ETF1 chr5 137854556 - Exonic hg19 SKCM TCGA-EE-A2M7-06A 11 50 Out-of-frame Intra-chr q31.2 Seq+ 46876 ChimerSeq STARFusion TCGA_RNA-Seq RNF145-PDE4D RNF145 chr5 158596687 - PDE4D chr5 58511794 - Exonic hg19 SKCM TCGA-EE-A2M7-06A 5 43 In-Frame Intra-chr q33.3 q12.1 Seq+ 46877 ChimerSeq STARFusion TCGA_RNA-Seq RNF145-PDE4D RNF145 chr5 158595881 - PDE4D chr5 58511794 - Exonic hg19 SKCM TCGA-EE-A2M7-06A 3 43 In-Frame Intra-chr q33.3 q12.1 Seq+ 46878 ChimerSeq STARFusion TCGA_RNA-Seq GRIA1-RAD17 GRIA1 chr5 153085627 + RAD17 chr5 68677728 + Exonic hg19 SKCM TCGA-EE-A2M7-06A 2 16 Out-of-frame Intra-chr q33.2 Seq+ 46879 ChimerSeq STARFusion TCGA_RNA-Seq MT1L-MT2A MT1L chr16 56652570 + MT2A chr16 56643206 + Exonic hg19 SKCM TCGA-EE-A2M7-06A 3 2 Out-of-frame Intra-chr q13 q13 Tumor suppressor gene 46880 ChimerSeq STARFusion TCGA_RNA-Seq SEMA3E-RNA45S5 SEMA3E chr7 83014716 - RNA45S5 chrUn_gl000220 115575 + Exonic hg19 SKCM TCGA-EE-A2M7-06A 3 1 Out-of-frame Inter-chr q21.11 46881 ChimerSeq STARFusion TCGA_RNA-Seq CASD1-SGCE CASD1 chr7 94183887 + SGCE chr7 94218044 - Exonic hg19 SKCM TCGA-EE-A2M7-06A 2 1 Out-of-frame Intra-chr q21.3 q21.3 46882 ChimerSeq STARFusion TCGA_RNA-Seq GXYLT2-PRICKLE2 GXYLT2 chr3 72957710 + PRICKLE2 chr3 64148805 - Exonic hg19 SKCM TCGA-D3-A2JG-06A 49 223 In-Frame Intra-chr p13 p14.1 Seq+ 46883 ChimerSeq STARFusion TCGA_RNA-Seq SS18L1-JAM2 SS18L1 chr20 60740570 + JAM2 chr21 27056195 + Exonic hg19 SKCM TCGA-D3-A2JG-06A 36 155 In-Frame Inter-chr q13.33 q21.3 Seq+ 46884 ChimerSeq STARFusion TCGA_RNA-Seq CADPS-FAM19A1 CADPS chr3 62451042 - FAM19A1 chr3 68466430 + Exonic hg19 SKCM TCGA-D3-A2JG-06A 7 36 Out-of-frame Intra-chr p14.2 p14.1 Seq+ 46885 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM4-NLRP1 R3HDM4 chr19 900829 - NLRP1 chr17 5405192 - Exonic hg19 SKCM TCGA-D3-A2JG-06A 3 18 In-Frame Inter-chr p13.3 p13.2 Oncogene Seq+ 46886 ChimerSeq STARFusion TCGA_RNA-Seq MITF-PRICKLE2 MITF chr3 69788852 + PRICKLE2 chr3 64085601 - Exonic hg19 SKCM TCGA-D3-A2JG-06A 4 12 Out-of-frame Intra-chr p13 Oncogene Transcription factor p14.1 Seq+ 46887 ChimerSeq STARFusion TCGA_RNA-Seq MITF-PSMD6 MITF chr3 69788852 + PSMD6 chr3 64008199 - Exonic hg19 SKCM TCGA-D3-A2JG-06A 4 5 Out-of-frame Intra-chr p13 Oncogene Transcription factor p14.1 Seq+ 46888 ChimerSeq STARFusion TCGA_RNA-Seq GPI-UBAP1L GPI chr19 34859607 + UBAP1L chr15 65386914 - Exonic hg19 SKCM TCGA-D3-A2JG-06A 4 1 In-Frame Inter-chr q22.31 46889 ChimerSeq STARFusion TCGA_RNA-Seq BNC2-C9orf92 BNC2 chr9 16870644 - C9orf92 chr9 16215897 - Exonic hg19 SKCM TCGA-DA-A1I4-06A 20 250 Out-of-frame Intra-chr p22.2 Transcription factor p22.3 46890 ChimerSeq STARFusion TCGA_RNA-Seq BNC2-C9orf92 BNC2 chr9 16832242 - C9orf92 chr9 16215897 - Exonic hg19 SKCM TCGA-DA-A1I4-06A 5 250 Out-of-frame Intra-chr p22.2 Transcription factor p22.3 46891 ChimerSeq STARFusion TCGA_RNA-Seq BNC2-C9orf92 BNC2 chr9 16870644 - C9orf92 chr9 16245787 - Exonic hg19 SKCM TCGA-DA-A1I4-06A 4 250 Out-of-frame Intra-chr p22.2 Transcription factor p22.3 46892 ChimerSeq STARFusion TCGA_RNA-Seq ARRB2-CTSD ARRB2 chr17 4624647 + CTSD chr11 1774071 - Exonic hg19 SKCM TCGA-DA-A1I4-06A 3 1 Out-of-frame Inter-chr p13.2 p15.5 46893 ChimerSeq STARFusion TCGA_RNA-Seq AGAP3-NOC4L AGAP3 chr7 150784159 + NOC4L chr12 132635526 + Exonic hg19 SKCM TCGA-DA-A1I4-06A 2 1 In-Frame Inter-chr q36.1 q24.33 46894 ChimerSeq STARFusion TCGA_RNA-Seq RAPH1-CD46 RAPH1 chr2 204399834 - CD46 chr1 207958416 + Exonic hg19 SKCM TCGA-DA-A1I4-06A 2 0 5'UTR-CDS Inter-chr q33.2 q32.2 46895 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-PIP5K1P1 KCTD20 chr6 36457999 + PIP5K1P1 chr6 7987766 + Exonic hg19 SKCM TCGA-FS-A1ZR-06A 3 0 Out-of-frame Intra-chr p21.31 p24.3 46896 ChimerSeq STARFusion TCGA_RNA-Seq MOSPD2-PIR MOSPD2 chrX 14891880 + PIR chrX 15425672 - Exonic hg19 SKCM TCGA-FS-A1ZR-06A 2 2 In-Frame Intra-chr p22.2 p22.2 46897 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-ITLN1 ETV6 chr12 11803094 + ITLN1 chr1 160854673 - Exonic hg19 SKCM TCGA-W3-AA1V-06B 48 172 CDS-5'UTR Inter-chr p13.2 Tumor suppressor gene Transcription factor q23.3 Seq+ 46898 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A16-DRGX SLC25A16 chr10 70248224 - DRGX chr10 50574426 - Exonic hg19 SKCM TCGA-W3-AA1V-06B 12 24 Out-of-frame Intra-chr q21.3 q11.23 Transcription factor Seq+ 46899 ChimerSeq STARFusion TCGA_RNA-Seq ST5-DENND5A ST5 chr11 8853103 - DENND5A chr11 9171756 - Exonic hg19 SKCM TCGA-W3-AA1V-06B 7 38 5'UTR-CDS Intra-chr p15.4 Tumor suppressor gene p15.4 Seq+ 46900 ChimerSeq STARFusion TCGA_RNA-Seq MARCH3-OPCML 2019_ 3_ 3_ chr5 126366042 - OPCML chr11 132812905 - Exonic hg19 SKCM TCGA-W3-AA1V-06B 9 25 Out-of-frame Inter-chr q23.2 q25 Tumor suppressor gene Seq+ 46901 ChimerSeq STARFusion TCGA_RNA-Seq ST5-DENND5A ST5 chr11 8860857 - DENND5A chr11 9171756 - Exonic hg19 SKCM TCGA-W3-AA1V-06B 4 37 5'UTR-CDS Intra-chr p15.4 Tumor suppressor gene p15.4 Seq+ 46902 ChimerSeq STARFusion TCGA_RNA-Seq ST5-DENND5A ST5 chr11 8892881 - DENND5A chr11 9171756 - Exonic hg19 SKCM TCGA-W3-AA1V-06B 2 37 5'UTR-CDS Intra-chr p15.4 Tumor suppressor gene p15.4 Seq+ 46903 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R2A-EIF3H PPP2R2A chr8 26151256 + EIF3H chr8 117671219 - Exonic hg19 SKCM TCGA-W3-AA1V-06B 3 27 In-Frame Intra-chr p21.2 q24.11 Seq+ 46904 ChimerSeq STARFusion TCGA_RNA-Seq CTDSPL2-B2M CTDSPL2 chr15 44719970 + B2M chr15 45009805 + Exonic hg19 SKCM TCGA-W3-AA1V-06B 3 7 5'UTR-3'UTR Intra-chr q15.3 Oncogene 46905 ChimerSeq STARFusion TCGA_RNA-Seq LINC00263-CALCOCO2 LINC00263 chr10 102133769 + CALCOCO2 chr17 46925426 + Exonic hg19 SKCM TCGA-DA-A1HY-06A 8 33 5'UTR-CDS Inter-chr q21.32 46906 ChimerSeq STARFusion TCGA_RNA-Seq ICA1L-PIGY ICA1L chr2 203638806 - PIGY chr4 89443102 - Exonic hg19 SKCM TCGA-D3-A3ML-06A 5 166 Out-of-frame Inter-chr q33.2 q22.1 46907 ChimerSeq STARFusion TCGA_RNA-Seq ICA1L-PYURF ICA1L chr2 203638806 - PYURF chr4 89443102 - Exonic hg19 SKCM TCGA-D3-A3ML-06A 5 166 Out-of-frame Inter-chr q33.2 q22.1 46908 ChimerSeq STARFusion TCGA_RNA-Seq AKT3-CDC14A AKT3 chr1 244006427 - CDC14A chr1 100856288 + Exonic hg19 SKCM TCGA-D3-A3ML-06A 10 23 Out-of-frame Intra-chr AGC:Akt Oncogene p21.2 Seq+ 46909 ChimerSeq STARFusion TCGA_RNA-Seq PDE4DIP-LOC728989 PDE4DIP chr1 144857612 - LOC728989 chr1 146494638 - Exonic hg19 SKCM TCGA-D3-A3ML-06A 2 34 CDS-3'UTR Intra-chr q21.2 Oncogene 46910 ChimerSeq STARFusion TCGA_RNA-Seq C10orf88-PPAPDC1A C10orf88 chr10 124708165 - PPAPDC1A chr10 122334643 + Exonic hg19 SKCM TCGA-EB-A4P0-01A 5 36 Out-of-frame Intra-chr q26.13 Seq+ 46911 ChimerSeq STARFusion TCGA_RNA-Seq AIF1L-SYN2 AIF1L chr9 133987050 + SYN2 chr3 12203046 + Exonic hg19 SKCM TCGA-EB-A4P0-01A 2 28 Out-of-frame Inter-chr q34.12 p25.2 Seq+ 46912 ChimerSeq STARFusion TCGA_RNA-Seq RPP14-ABHD6 RPP14 chr3 58296318 + ABHD6 chr3 58252916 + Exonic hg19 SKCM TCGA-EB-A4P0-01A 4 12 Out-of-frame Intra-chr p14.3 p14.3 Seq+ 46913 ChimerSeq STARFusion TCGA_RNA-Seq MED13L-LINC00967 MED13L chr12 116675273 - LINC00967 chr8 67108960 + Exonic hg19 SKCM TCGA-D3-A3BZ-06A 58 391 Out-of-frame Inter-chr q24.21 q13.1 46914 ChimerSeq STARFusion TCGA_RNA-Seq RBM19-PTPRQ RBM19 chr12 114352774 - PTPRQ chr12 80981908 + Exonic hg19 SKCM TCGA-D3-A3BZ-06A 25 109 Out-of-frame Intra-chr q24.21 q21.31 Seq+ 46915 ChimerSeq STARFusion TCGA_RNA-Seq MPRIP-TRAT1 MPRIP chr17 16981390 + TRAT1 chr3 108549517 + Exonic hg19 SKCM TCGA-D3-A3BZ-06A 4 33 Out-of-frame Inter-chr p11.2 q13.13 Seq+ 46916 ChimerSeq STARFusion TCGA_RNA-Seq SGK3-NCK1 SGK3 chr8 67755782 + NCK1 chr3 136667101 + Exonic hg19 SKCM TCGA-D3-A3BZ-06A 5 25 In-Frame Inter-chr q13.1 AGC:SGK q22.3 Seq+ 46917 ChimerSeq STARFusion TCGA_RNA-Seq MPRIP-TRAT1 MPRIP chr17 16981390 + TRAT1 chr3 108557781 + Exonic hg19 SKCM TCGA-D3-A3BZ-06A 2 29 Out-of-frame Inter-chr p11.2 q13.13 Seq+ 46918 ChimerSeq STARFusion TCGA_RNA-Seq IFT81-GLIPR1L2 IFT81 chr12 110618376 + GLIPR1L2 chr12 75804214 + Exonic hg19 SKCM TCGA-D3-A3BZ-06A 3 17 In-Frame Intra-chr q24.11 q21.2 Seq+ 46919 ChimerSeq STARFusion TCGA_RNA-Seq NMNAT3-SELT NMNAT3 chr3 139396547 - SELT chr3 150340172 + Exonic hg19 SKCM TCGA-D3-A3BZ-06A 3 13 5'UTR-CDS Intra-chr q23 46920 ChimerSeq STARFusion TCGA_RNA-Seq SLC4A2-IGL@ SLC4A2 chr7 150771939 + IGL@ chr22 23247171 + Exonic hg19 SKCM TCGA-EE-A2GH-06A 14 1 Out-of-frame Inter-chr q36.1 q11.22 46921 ChimerSeq STARFusion TCGA_RNA-Seq KCNK17-IGH@ KCNK17 chr6 39271994 - IGH@ chr14 106330453 - Exonic hg19 SKCM TCGA-EE-A2GH-06A 14 0 Out-of-frame Inter-chr p21.2 32.33 46922 ChimerSeq STARFusion TCGA_RNA-Seq KCNK17-IGHJ4 KCNK17 chr6 39271994 - IGHJ4 chr14 106330453 - Exonic hg19 SKCM TCGA-EE-A2GH-06A 14 0 Out-of-frame Inter-chr p21.2 46923 ChimerSeq STARFusion TCGA_RNA-Seq HCFC1-IGHG1 HCFC1 chrX 153222122 - IGHG1 chr14 106209411 - Exonic hg19 SKCM TCGA-EE-A2GH-06A 11 0 Out-of-frame Inter-chr q28 q32.33 46924 ChimerSeq STARFusion TCGA_RNA-Seq KCNJ12-PIK3CD KCNJ12 chr17 21321277 + PIK3CD chr1 9778813 + Exonic hg19 SKCM TCGA-EE-A2GH-06A 11 0 Out-of-frame Inter-chr p11.2 p36.22 Oncogene 46925 ChimerSeq STARFusion TCGA_RNA-Seq CD4-IGH@ CD4 chr12 6924003 + IGH@ chr14 106329461 - Exonic hg19 SKCM TCGA-EE-A2GH-06A 8 2 Out-of-frame Inter-chr p13.31 Tumor suppressor gene 32.33 46926 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-NOTCH1 IGH@ chr14 106134591 - NOTCH1 chr9 139403429 - Exonic hg19 SKCM TCGA-EE-A2GH-06A 8 2 Out-of-frame Inter-chr 32.33 q34.3 Oncogene Tumor suppressor gene 46927 ChimerSeq STARFusion TCGA_RNA-Seq CD4-IGHG3 CD4 chr12 6924003 + IGHG3 chr14 106329461 - Exonic hg19 SKCM TCGA-EE-A2GH-06A 8 1 Out-of-frame Inter-chr p13.31 Tumor suppressor gene 46928 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-HIVEP3 IGH@ chr14 106134768 - HIVEP3 chr1 41978893 - Exonic hg19 SKCM TCGA-EE-A2GH-06A 8 1 Out-of-frame Inter-chr 32.33 p34.2 Tumor suppressor gene Transcription factor 46929 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0368-IGH@ KIAA0368 chr9 114128893 - IGH@ chr14 106330070 - Exonic hg19 SKCM TCGA-EE-A2GH-06A 7 1 Out-of-frame Inter-chr q31.3 32.33 46930 ChimerSeq STARFusion TCGA_RNA-Seq POMK-LSS POMK chr8 42958973 + LSS chr21 47616181 - Exonic hg19 SKCM TCGA-EE-A2GH-06A 2 8 Out-of-frame Inter-chr p11.21 q22.3 Seq+ 46931 ChimerSeq STARFusion TCGA_RNA-Seq PAPSS2-PTEN PAPSS2 chr10 89419765 + PTEN chr10 89711875 + Exonic hg19 SKCM TCGA-FS-A1Z7-06A 12 91 In-Frame Intra-chr q23.2 q23.31 Oncogene Tumor suppressor gene Seq+ 46932 ChimerSeq STARFusion TCGA_RNA-Seq PAPSS2-PTEN PAPSS2 chr10 89420162 + PTEN chr10 89711875 + Exonic hg19 SKCM TCGA-FS-A1Z7-06A 3 72 Out-of-frame Intra-chr q23.2 q23.31 Oncogene Tumor suppressor gene Seq+ 46933 ChimerSeq STARFusion TCGA_RNA-Seq RNF185-DEPDC5 RNF185 chr22 31556289 + DEPDC5 chr22 32253431 + Exonic hg19 SKCM TCGA-FS-A1Z7-06A 4 27 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 46934 ChimerSeq STARFusion TCGA_RNA-Seq MAPK1-LOC100507412 MAPK1 chr22 22221612 - LOC100507412 chrUn_gl000220 121605 + Exonic hg19 SKCM TCGA-DA-A95Z-06A 35 126 CDS-5'UTR Inter-chr q11.22 Oncogene 46935 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-MN1 RNA45S5 chrUn_gl000220 106452 + MN1 chr22 28147084 - Exonic hg19 SKCM TCGA-DA-A95Z-06A 21 127 Out-of-frame Inter-chr q12.1 Oncogene 46936 ChimerSeq STARFusion TCGA_RNA-Seq TMEM117-KCNC2 TMEM117 chr12 44238731 + KCNC2 chr12 75445097 - Exonic hg19 SKCM TCGA-D3-A51H-06A 50 152 Out-of-frame Intra-chr q12 q21.1 Seq+ 46937 ChimerSeq STARFusion TCGA_RNA-Seq LBH-FLT4 LBH chr2 30457373 + FLT4 chr5 180058778 - Exonic hg19 SKCM TCGA-D3-A3CF-06A 58 262 Out-of-frame Inter-chr p23.1 q35.3 TK:VEGFR Oncogene Seq+ 46938 ChimerSeq STARFusion TCGA_RNA-Seq CLIP4-TMEM18 CLIP4 chr2 29344387 + TMEM18 chr2 676238 - Exonic hg19 SKCM TCGA-D3-A3CF-06A 23 164 Out-of-frame Intra-chr p23.2 p25.3 Seq+ 46939 ChimerSeq STARFusion TCGA_RNA-Seq CLIP4-TMEM18 CLIP4 chr2 29344387 + TMEM18 chr2 675630 - Exonic hg19 SKCM TCGA-D3-A3CF-06A 23 161 Out-of-frame Intra-chr p23.2 p25.3 Seq+ 46940 ChimerSeq STARFusion TCGA_RNA-Seq NOL6-IGH@ NOL6 chr9 33462763 - IGH@ chr14 106330466 - Exonic hg19 SKCM TCGA-D3-A3CF-06A 40 3 Out-of-frame Inter-chr p13.3 32.33 46941 ChimerSeq STARFusion TCGA_RNA-Seq NOL6-IGHG3 NOL6 chr9 33462763 - IGHG3 chr14 106330466 - Exonic hg19 SKCM TCGA-D3-A3CF-06A 40 1 Out-of-frame Inter-chr p13.3 46942 ChimerSeq STARFusion TCGA_RNA-Seq XPR1-SPRR2A XPR1 chr1 180651547 + SPRR2A chr1 153029230 - Exonic hg19 SKCM TCGA-D3-A3CF-06A 12 46 CDS-5'UTR Intra-chr q25.3 q21.3 46943 ChimerSeq STARFusion TCGA_RNA-Seq ITSN2-MYO10 ITSN2 chr2 24583173 - MYO10 chr5 16818276 - Exonic hg19 SKCM TCGA-D3-A3CF-06A 11 44 5'UTR-CDS Inter-chr p23.3 p15.1 Seq+ 46944 ChimerSeq STARFusion TCGA_RNA-Seq SNTG2-RBKS SNTG2 chr2 1320147 + RBKS chr2 28055644 - Exonic hg19 SKCM TCGA-D3-A3CF-06A 12 33 Out-of-frame Intra-chr p23.2 Seq+ 46945 ChimerSeq STARFusion TCGA_RNA-Seq XPR1-SPRR2A XPR1 chr1 180651547 + SPRR2A chr1 153043334 - Exonic hg19 SKCM TCGA-D3-A3CF-06A 6 46 CDS-5'UTR Intra-chr q25.3 q21.3 46946 ChimerSeq STARFusion TCGA_RNA-Seq FBXL7-FOSL2 FBXL7 chr5 15500822 + FOSL2 chr2 28626974 + Exonic hg19 SKCM TCGA-D3-A3CF-06A 7 27 Out-of-frame Inter-chr p15.1 p23.2 Transcription factor Seq+ 46947 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-DCT IGH@ chr14 106785878 - DCT chr13 95119100 - Exonic hg19 SKCM TCGA-D3-A3CF-06A 13 1 Out-of-frame Inter-chr 32.33 q32.1 46948 ChimerSeq STARFusion TCGA_RNA-Seq NCOA1-GUSBP1 NCOA1 chr2 24905997 + GUSBP1 chr5 21585639 + Exonic hg19 SKCM TCGA-D3-A3CF-06A 6 27 CDS-5'UTR Inter-chr p23.3 Oncogene Transcription factor p14.3 Seq+ 46949 ChimerSeq STARFusion TCGA_RNA-Seq FAM228B-SNTG2 FAM228B chr2 24358057 + SNTG2 chr2 1312266 + Exonic hg19 SKCM TCGA-D3-A3CF-06A 4 28 Out-of-frame Intra-chr p23.3 Seq+ 46950 ChimerSeq STARFusion TCGA_RNA-Seq ITSN2-KIDINS220 ITSN2 chr2 24498582 - KIDINS220 chr2 8926487 - Exonic hg19 SKCM TCGA-D3-A3CF-06A 4 24 In-Frame Intra-chr p23.3 p25.1 Seq+ 46951 ChimerSeq STARFusion TCGA_RNA-Seq FAM134B-SNTG2 FAM134B chr5 16565872 - SNTG2 chr2 1312266 + Exonic hg19 SKCM TCGA-D3-A3CF-06A 5 16 Out-of-frame Inter-chr Seq+ 46952 ChimerSeq STARFusion TCGA_RNA-Seq NCOA1-GUSBP1 NCOA1 chr2 24715057 + GUSBP1 chr5 21459787 + Exonic hg19 SKCM TCGA-D3-A3CF-06A 2 24 5'UTR-5'UTR Inter-chr p23.3 Oncogene Transcription factor p14.3 Seq+ 46953 ChimerSeq STARFusion TCGA_RNA-Seq PLOD1-FBXL7 PLOD1 chr1 12025650 + FBXL7 chr5 15616092 + Exonic hg19 SKCM TCGA-D3-A3CF-06A 3 16 Out-of-frame Inter-chr p36.22 p15.1 Seq+ 46954 ChimerSeq STARFusion TCGA_RNA-Seq RNF213-TBCD RNF213 chr17 78237577 + TBCD chr17 80828100 + Exonic hg19 SKCM TCGA-XV-AAZV-01A 10 48 In-Frame Intra-chr q25.3 Oncogene Seq+ 46955 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD2-MYT1 PCMTD2 chr20 62891625 + MYT1 chr20 62850264 + Exonic hg19 SKCM TCGA-XV-AAZV-01A 2 10 In-Frame Intra-chr Other:WEE Transcription factor Seq+ 46956 ChimerSeq STARFusion TCGA_RNA-Seq TNPO2-NFIX TNPO2 chr19 12834063 - NFIX chr19 13183861 + Exonic hg19 SKCM TCGA-DA-A1I0-06A 64 276 5'UTR-CDS Intra-chr p13.13 p13.13 Transcription factor Seq+ 46957 ChimerSeq STARFusion TCGA_RNA-Seq TNPO2-NFIX TNPO2 chr19 12833291 - NFIX chr19 13183861 + Exonic hg19 SKCM TCGA-DA-A1I0-06A 19 276 5'UTR-CDS Intra-chr p13.13 p13.13 Transcription factor Seq+ 46958 ChimerSeq STARFusion TCGA_RNA-Seq ZNF136-XAB2 ZNF136 chr19 12274021 + XAB2 chr19 7693184 - Exonic hg19 SKCM TCGA-DA-A1I0-06A 18 45 In-Frame Intra-chr p13.2 Transcription factor p13.2 Seq+ 46959 ChimerSeq STARFusion TCGA_RNA-Seq ZNF20-TINCR ZNF20 chr19 12250995 - TINCR chr19 5562222 - Exonic hg19 SKCM TCGA-DA-A1I0-06A 11 40 Out-of-frame Intra-chr p13.2 Transcription factor p13.3 Seq+ 46960 ChimerSeq STARFusion TCGA_RNA-Seq ZNF57-NANOS3 ZNF57 chr19 2901046 + NANOS3 chr19 13991256 + Exonic hg19 SKCM TCGA-DA-A1I0-06A 11 34 Out-of-frame Intra-chr p13.3 Transcription factor p13.12 Seq+ 46961 ChimerSeq STARFusion TCGA_RNA-Seq ZNF136-XAB2 ZNF136 chr19 12274021 + XAB2 chr19 7689331 - Exonic hg19 SKCM TCGA-DA-A1I0-06A 5 45 In-Frame Intra-chr p13.2 Transcription factor p13.2 Seq+ 46962 ChimerSeq STARFusion TCGA_RNA-Seq DST-MLIP DST chr6 56371241 - MLIP chr6 53986245 + Exonic hg19 SKCM TCGA-DA-A1I0-06A 9 18 In-Frame Intra-chr p12.1 Oncogene p12.1 Seq+ 46963 ChimerSeq STARFusion TCGA_RNA-Seq DST-MLIP DST chr6 56371241 - MLIP chr6 53989271 + Exonic hg19 SKCM TCGA-DA-A1I0-06A 2 18 In-Frame Intra-chr p12.1 Oncogene p12.1 Seq+ 46964 ChimerSeq STARFusion TCGA_RNA-Seq FBXO18-MIRLET7BHG FBXO18 chr10 5932309 + MIRLET7BHG chr22 46493806 + Exonic hg19 SKCM TCGA-DA-A1I0-06A 2 0 5'UTR-5'UTR Inter-chr p15.1 q13.31 46965 ChimerSeq STARFusion TCGA_RNA-Seq MMP17-NOC4L MMP17 chr12 132313198 + NOC4L chr12 132635526 + Exonic hg19 SKCM TCGA-DA-A1I0-06A 2 0 Out-of-frame Intra-chr q24.33 q24.33 Seq+ 46966 ChimerSeq STARFusion TCGA_RNA-Seq UBE2Q1-MYO7A UBE2Q1 chr1 154527211 - MYO7A chr11 76885802 + Exonic hg19 SKCM TCGA-EE-A180-06A 24 77 In-Frame Inter-chr q21.3 q13.5 Seq+ 46967 ChimerSeq STARFusion TCGA_RNA-Seq GAB2-SPRR2B GAB2 chr11 78128692 - SPRR2B chr1 153043334 - Exonic hg19 SKCM TCGA-EE-A180-06A 5 2 CDS-5'UTR Inter-chr q14.1 q21.3 46968 ChimerSeq STARFusion TCGA_RNA-Seq GAB2-SPRR2A GAB2 chr11 78128692 - SPRR2A chr1 153029230 - Exonic hg19 SKCM TCGA-EE-A180-06A 4 1 CDS-5'UTR Inter-chr q14.1 q21.3 46969 ChimerSeq STARFusion TCGA_RNA-Seq GAB2-SPRR2D GAB2 chr11 78128692 - SPRR2D chr1 153012841 - Exonic hg19 SKCM TCGA-EE-A180-06A 2 4 CDS-5'UTR Inter-chr q14.1 q21.3 46970 ChimerSeq STARFusion TCGA_RNA-Seq CALD1-SLC41A1 CALD1 chr7 134576424 + SLC41A1 chr1 205780215 - Exonic hg19 SKCM TCGA-FS-A1ZU-06A 32 81 CDS-5'UTR Inter-chr q33 q32.1 Seq+ 46971 ChimerSeq STARFusion TCGA_RNA-Seq CDC27-BRAF CDC27 chr17 45206759 - BRAF chr7 140487384 - Exonic hg19 SKCM TCGA-FS-A1ZU-06A 10 28 In-Frame Inter-chr q21.32 q34 TKL:RAF Oncogene Seq+ 46972 ChimerSeq STARFusion TCGA_RNA-Seq KCNT2-LOC284581 KCNT2 chr1 196434423 - LOC284581 chr1 205860284 + Exonic hg19 SKCM TCGA-FS-A1ZU-06A 2 3 CDS-5'UTR Intra-chr q31.3 46973 ChimerSeq STARFusion TCGA_RNA-Seq SOX13-PTPRC SOX13 chr1 204042839 + PTPRC chr1 198672427 + Exonic hg19 SKCM TCGA-FS-A1ZU-06A 2 1 5'UTR-CDS Intra-chr q32.1 Transcription factor Tumor suppressor gene 46974 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-SRD5A3 PPFIA1 chr11 70176425 + SRD5A3 chr4 56225513 + Exonic hg19 SKCM TCGA-FR-A7UA-06A 2 9 Out-of-frame Inter-chr q13.3 q12 Seq+ 46975 ChimerSeq STARFusion TCGA_RNA-Seq LRRC8D-PALMD LRRC8D chr1 90309341 + PALMD chr1 100127875 + Exonic hg19 SKCM TCGA-FR-A7UA-06A 2 3 5'UTR-CDS Intra-chr p22.2 p21.2 Seq+ 46976 ChimerSeq STARFusion TCGA_RNA-Seq TP53-CHD3 TP53 chr17 7590695 - CHD3 chr17 7798657 + Exonic hg19 SKCM TCGA-EE-A2GU-06A 34 179 5'UTR-CDS Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.1 Seq+ 46977 ChimerSeq STARFusion TCGA_RNA-Seq RBMS1-ORC4 RBMS1 chr2 161223727 - ORC4 chr2 148701091 - Exonic hg19 SKCM TCGA-EE-A2GU-06A 14 72 Out-of-frame Intra-chr q24.2 q23.1 Seq+ 46978 ChimerSeq STARFusion TCGA_RNA-Seq ORC4-MAPK4 ORC4 chr2 148709942 - MAPK4 chr18 48255528 + Exonic hg19 SKCM TCGA-EE-A2GU-06A 11 26 Out-of-frame Inter-chr q23.1 q21.1 Seq+ 46979 ChimerSeq STARFusion TCGA_RNA-Seq ORC4-MAPK4 ORC4 chr2 148712916 - MAPK4 chr18 48255528 + Exonic hg19 SKCM TCGA-EE-A2GU-06A 2 26 Out-of-frame Inter-chr q23.1 q21.1 Seq+ 46980 ChimerSeq STARFusion TCGA_RNA-Seq PTPRS-TMEM8A PTPRS chr19 5340675 - TMEM8A chr16 427848 - Exonic hg19 SKCM TCGA-EE-A2GU-06A 5 9 5'UTR-CDS Inter-chr p13.3 p13.3 Seq+ 46981 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF6-FNIP1 RAPGEF6 chr5 130778042 - FNIP1 chr5 130987692 - Exonic hg19 SKCM TCGA-EE-A2GU-06A 4 7 Out-of-frame Intra-chr q31.1 q31.1 46982 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-CASC11 PVT1 chr8 129001537 + CASC11 chr8 128746205 - Exonic hg19 SKCM TCGA-EE-A2M6-06A 21 177 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 46983 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-CASC11 PVT1 chr8 129022690 + CASC11 chr8 128746205 - Exonic hg19 SKCM TCGA-EE-A2M6-06A 13 174 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 46984 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-CASC11 PVT1 chr8 129082518 + CASC11 chr8 128746205 - Exonic hg19 SKCM TCGA-EE-A2M6-06A 13 174 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 46985 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-CASC11 PVT1 chr8 129082607 + CASC11 chr8 128746205 - Exonic hg19 SKCM TCGA-EE-A2M6-06A 5 174 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 46986 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-MYC PVT1 chr8 128806980 + MYC chr8 128750494 + Exonic hg19 SKCM TCGA-EE-A2M6-06A 16 41 5'UTR-CDS Intra-chr q24.21 q24.21 Oncogene Transcription factor KB Pub Seq+ 46987 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-MYC PVT1 chr8 128806980 + MYC chr8 128750497 + Exonic hg19 SKCM TCGA-EE-A2M6-06A 3 41 5'UTR-CDS Intra-chr q24.21 q24.21 Oncogene Transcription factor KB Pub Seq+ 46988 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 SKCM TCGA-EB-A44P-01A 3 1 In-Frame Intra-chr p11.21 p11.21 46989 ChimerSeq STARFusion TCGA_RNA-Seq TYR-SDF2 TYR chr11 88924586 + SDF2 chr17 26982501 - Exonic hg19 SKCM TCGA-EB-A44P-01A 2 1 In-Frame Inter-chr q14.3 q11.2 46990 ChimerSeq STARFusion TCGA_RNA-Seq IPO7-CTR9 IPO7 chr11 9406394 + CTR9 chr11 10774219 + Exonic hg19 SKCM TCGA-WE-A8K5-06A 6 20 In-Frame Intra-chr p15.4 p15.4 Seq+ 46991 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-VAT1 KANSL1 chr17 44248221 - VAT1 chr17 41168565 - Exonic hg19 SKCM TCGA-WE-A8K5-06A 3 13 Out-of-frame Intra-chr q21.31 Seq+ 46992 ChimerSeq STARFusion TCGA_RNA-Seq BAGE2-CTBP2P1 BAGE2 chr21 11058161 - CTBP2P1 chrY 59001440 + Exonic hg19 SKCM TCGA-D3-A8GL-06A 10 21 Out-of-frame Inter-chr p11.2 46993 ChimerSeq STARFusion TCGA_RNA-Seq EIF1-LOC100507412 EIF1 chr17 39846441 + LOC100507412 chrUn_gl000220 121605 + Exonic hg19 SKCM TCGA-BF-A5EP-01A 151 662 CDS-5'UTR Inter-chr q21.2 46994 ChimerSeq STARFusion TCGA_RNA-Seq BRAF-ATG7 BRAF chr7 140507760 - ATG7 chr3 11596285 + Exonic hg19 SKCM TCGA-BF-A5EP-01A 56 127 In-Frame Inter-chr q34 TKL:RAF Oncogene p25.3 Seq+ 46995 ChimerSeq STARFusion TCGA_RNA-Seq HIBADH-BRAF HIBADH chr7 27668990 - BRAF chr7 140501360 - Exonic hg19 SKCM TCGA-BF-A5EP-01A 6 10 Out-of-frame Intra-chr p15.2 q34 TKL:RAF Oncogene Seq+ 46996 ChimerSeq STARFusion TCGA_RNA-Seq BRAF-HIBADH BRAF chr7 140500162 - HIBADH chr7 27582719 - Exonic hg19 SKCM TCGA-BF-A5EP-01A 5 2 Out-of-frame Intra-chr q34 TKL:RAF Oncogene p15.2 Seq+ 46997 ChimerSeq STARFusion TCGA_RNA-Seq GALNT11-LMBR1 GALNT11 chr7 151722969 + LMBR1 chr7 156629579 - Exonic hg19 SKCM TCGA-BF-A5EP-01A 2 5 5'UTR-CDS Intra-chr q36.1 q36.3 Seq+ 46998 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57697534 + VMP1 chr17 57886157 + Exonic hg19 SKCM TCGA-W3-A824-06A 19 37 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 46999 ChimerSeq STARFusion TCGA_RNA-Seq ENAH-SCCPDH ENAH chr1 225840388 - SCCPDH chr1 246921528 + Exonic hg19 SKCM TCGA-W3-A824-06A 10 63 Out-of-frame Intra-chr q42.12 q44 Seq+ 47000 ChimerSeq STARFusion TCGA_RNA-Seq ENAH-SCCPDH ENAH chr1 225840388 - SCCPDH chr1 246907378 + Exonic hg19 SKCM TCGA-W3-A824-06A 9 63 Out-of-frame Intra-chr q42.12 q44 Seq+ 47001 ChimerSeq STARFusion TCGA_RNA-Seq ENAH-SCCPDH ENAH chr1 225840388 - SCCPDH chr1 246922336 + Exonic hg19 SKCM TCGA-W3-A824-06A 2 63 In-Frame Intra-chr q42.12 q44 Seq+ 47002 ChimerSeq STARFusion TCGA_RNA-Seq CABIN1-GSTT2 CABIN1 chr22 24509715 + GSTT2 chr22 24323139 + Exonic hg19 SKCM TCGA-GN-A4U4-06A 16 68 CDS-5'UTR Intra-chr Seq+ 47003 ChimerSeq STARFusion TCGA_RNA-Seq DUS2L-HSD11B2 DUS2L chr16 68105011 + HSD11B2 chr16 67470152 + Exonic hg19 SKCM TCGA-EB-A3Y7-01A 28 99 Out-of-frame Intra-chr q22.1 Seq+ 47004 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V0D1-DUS2L ATP6V0D1 chr16 67514860 - DUS2L chr16 68104041 + Exonic hg19 SKCM TCGA-EB-A3Y7-01A 13 135 Out-of-frame Intra-chr q22.1 Seq+ 47005 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V0D1-DUS2L ATP6V0D1 chr16 67514860 - DUS2L chr16 68104037 + Exonic hg19 SKCM TCGA-EB-A3Y7-01A 12 135 Out-of-frame Intra-chr q22.1 Seq+ 47006 ChimerSeq STARFusion TCGA_RNA-Seq MMP17-NOC4L MMP17 chr12 132313198 + NOC4L chr12 132635526 + Exonic hg19 SKCM TCGA-EB-A3Y7-01A 14 8 Out-of-frame Intra-chr q24.33 q24.33 Seq+ 47007 ChimerSeq STARFusion TCGA_RNA-Seq MMP17-NOC4L MMP17 chr12 132313198 + NOC4L chr12 132635803 + Exonic hg19 SKCM TCGA-EB-A3Y7-01A 4 8 Out-of-frame Intra-chr q24.33 q24.33 Seq+ 47008 ChimerSeq STARFusion TCGA_RNA-Seq TTYH3-NOC4L TTYH3 chr7 2671912 + NOC4L chr12 132635526 + Exonic hg19 SKCM TCGA-EB-A3Y7-01A 3 5 Out-of-frame Inter-chr p22.3 q24.33 Seq+ 47009 ChimerSeq STARFusion TCGA_RNA-Seq PMEL-NDUFB1 PMEL chr12 56359720 - NDUFB1 chr14 92583986 - Exonic hg19 SKCM TCGA-EB-A3Y7-01A 2 2 In-Frame Inter-chr q13.2 q32.12 47010 ChimerSeq STARFusion TCGA_RNA-Seq EEF1A1-IGHGP EEF1A1 chr6 74228494 - IGHGP chr14 106134627 - Exonic hg19 SKCM TCGA-FS-A1ZW-06A 4 11 Out-of-frame Inter-chr q13 Tumor suppressor gene 47011 ChimerSeq STARFusion TCGA_RNA-Seq BMS1P20-IGHG4 BMS1P20 chr22 22677162 + IGHG4 chr14 106091262 - Exonic hg19 SKCM TCGA-FS-A1ZW-06A 3 6 Out-of-frame Inter-chr 47012 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN3-PSTPIP1 TSPAN3 chr15 77344727 - PSTPIP1 chr15 77310489 + Exonic hg19 SKCM TCGA-EE-A2MQ-06A 4 19 In-Frame Intra-chr q24.3 q24.3 47013 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN3-PSTPIP1 TSPAN3 chr15 77339131 - PSTPIP1 chr15 77310489 + Exonic hg19 SKCM TCGA-EE-A2MQ-06A 3 19 3'UTR-CDS Intra-chr q24.3 q24.3 47014 ChimerSeq STARFusion TCGA_RNA-Seq HCG4P5-APOD HCG4P5 chr6 29910762 - APOD chr3 195385772 - Exonic hg19 SKCM TCGA-EE-A2MQ-06A 4 5 Out-of-frame Inter-chr q29 Seq+ 47015 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-RPL28 IGH@ chr14 106691672 - RPL28 chr19 55898321 + Exonic hg19 SKCM TCGA-EE-A2MT-06A 4 3 Out-of-frame Inter-chr 32.33 q13.42 47016 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-ANO1 PPFIA1 chr11 70118542 + ANO1 chr11 69933858 + Exonic hg19 SKCM TCGA-D3-A2J6-06A 51 243 In-Frame Intra-chr q13.3 q13.3 Seq+ 47017 ChimerSeq STARFusion TCGA_RNA-Seq ITCH-RALY ITCH chr20 32996598 + RALY chr20 32619328 + Exonic hg19 SKCM TCGA-D3-A2J6-06A 39 100 CDS-5'UTR Intra-chr q11.22 q11.22 Seq+ 47018 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND6-KCNRG ZFAND6 chr15 80390920 + KCNRG chr13 50594350 + Exonic hg19 SKCM TCGA-D3-A2J6-06A 12 69 5'UTR-CDS Inter-chr q25.1 q14.2 Tumor suppressor gene Seq+ 47019 ChimerSeq STARFusion TCGA_RNA-Seq ITCH-RALY ITCH chr20 32981687 + RALY chr20 32619328 + Exonic hg19 SKCM TCGA-D3-A2J6-06A 4 100 5'UTR-5'UTR Intra-chr q11.22 q11.22 Seq+ 47020 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND6-KCNRG ZFAND6 chr15 80352151 + KCNRG chr13 50594350 + Exonic hg19 SKCM TCGA-D3-A2J6-06A 6 69 5'UTR-CDS Inter-chr q25.1 q14.2 Tumor suppressor gene Seq+ 47021 ChimerSeq STARFusion TCGA_RNA-Seq NUP37-ACSS3 NUP37 chr12 102492884 - ACSS3 chr12 81503339 + Exonic hg19 SKCM TCGA-D3-A2J6-06A 2 24 In-Frame Intra-chr q23.2 q21.31 Seq+ 47022 ChimerSeq STARFusion TCGA_RNA-Seq TOPORS-NDUFB6 TOPORS chr9 32550772 - NDUFB6 chr9 32553942 - Exonic hg19 SKCM TCGA-D3-A2J6-06A 2 18 In-Frame Intra-chr p21.1 Tumor suppressor gene Transcription factor p21.1 47023 ChimerSeq STARFusion TCGA_RNA-Seq MYL6B-RAB5B MYL6B chr12 56549376 + RAB5B chr12 56380653 + Exonic hg19 SKCM TCGA-D3-A2J6-06A 2 10 CDS-5'UTR Intra-chr q13.2 q13.2 Seq+ 47024 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-DDX11L2 SLC39A11 chr17 70732789 - DDX11L2 chr2 114359006 - Exonic hg19 SKCM TCGA-D3-A2J6-06A 2 7 CDS-3'UTR Inter-chr q25.1 q14.1 47025 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-CD59 RNA45S5 chrUn_gl000220 110500 + CD59 chr11 33739006 - Exonic hg19 SKCM TCGA-D3-A2J6-06A 3 1 Out-of-frame Inter-chr p13 47026 ChimerSeq STARFusion TCGA_RNA-Seq PPIP5K1-CATSPER2 PPIP5K1 chr15 43857065 - CATSPER2 chr15 43940261 - Exonic hg19 SKCM TCGA-D3-A2J6-06A 2 2 CDS-5'UTR Intra-chr q15.3 q15.3 47027 ChimerSeq STARFusion TCGA_RNA-Seq ZCRB1-LIMA1 ZCRB1 chr12 42717821 - LIMA1 chr12 50616268 - Exonic hg19 SKCM TCGA-D9-A6E9-06A 23 73 In-Frame Intra-chr q12 q13.12 Tumor suppressor gene Seq+ 47028 ChimerSeq STARFusion TCGA_RNA-Seq MINPP1-PTEN MINPP1 chr10 89280926 + PTEN chr10 89685270 + Exonic hg19 SKCM TCGA-D9-A6E9-06A 2 36 In-Frame Intra-chr q23.2 q23.31 Oncogene Tumor suppressor gene 47029 ChimerSeq STARFusion TCGA_RNA-Seq C17orf85-ATP2A3 C17orf85 chr17 3717616 - ATP2A3 chr17 3857004 - Exonic hg19 SKCM TCGA-D9-A6E9-06A 4 5 In-Frame Intra-chr p13.2 Seq+ 47030 ChimerSeq STARFusion TCGA_RNA-Seq KCNJ12-PIK3CD KCNJ12 chr17 21321277 + PIK3CD chr1 9778813 + Exonic hg19 SKCM TCGA-EB-A5SG-06A 13 0 Out-of-frame Inter-chr p11.2 p36.22 Oncogene 47031 ChimerSeq STARFusion TCGA_RNA-Seq PMEL-TBC1D7 PMEL chr12 56359720 - TBC1D7 chr6 13321327 - Exonic hg19 SKCM TCGA-EB-A5SG-06A 2 2 In-Frame Inter-chr q13.2 p24.1 47032 ChimerSeq STARFusion TCGA_RNA-Seq GLTSCR2-DHX34 GLTSCR2 chr19 48249040 + DHX34 chr19 47885237 + Exonic hg19 SKCM TCGA-EB-A5SG-06A 2 0 Out-of-frame Intra-chr Tumor suppressor gene q13.32 47033 ChimerSeq STARFusion TCGA_RNA-Seq LYRM4-FARS2 LYRM4 chr6 5260881 - FARS2 chr6 5771524 + Exonic hg19 SKCM TCGA-D3-A2J9-06A 15 96 In-Frame Intra-chr p25.1 p25.1 Seq+ 47034 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-TINAGL1 IGHG1 chr14 106134591 - TINAGL1 chr1 32052503 + Exonic hg19 SKCM TCGA-D3-A2J9-06A 27 1 Out-of-frame Inter-chr q32.33 p35.2 47035 ChimerSeq STARFusion TCGA_RNA-Seq IPO7-TMEM41B IPO7 chr11 9406394 + TMEM41B chr11 9321248 - Exonic hg19 SKCM TCGA-DA-A95X-06A 4 11 Out-of-frame Intra-chr p15.4 p15.4 Seq+ 47036 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-AGTRAP SLC7A5 chr16 87902491 - AGTRAP chr1 11808590 + Exonic hg19 SKCM TCGA-DA-A95X-06A 3 1 In-Frame Inter-chr q24.2 p36.22 47037 ChimerSeq STARFusion TCGA_RNA-Seq TANGO6-CFDP1 TANGO6 chr16 68877614 + CFDP1 chr16 75339080 - Exonic hg19 SKCM TCGA-GF-A6C8-06A 13 84 Out-of-frame Intra-chr q22.1 q23.1 Seq+ 47038 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-CASZ1 GNB1 chr1 1822259 - CASZ1 chr1 10765601 - Exonic hg19 SKCM TCGA-EE-A3AA-06A 8 8 5'UTR-5'UTR Intra-chr p36.33 p36.22 Transcription factor Seq+ 47039 ChimerSeq STARFusion TCGA_RNA-Seq SKI-EIF4G3 SKI chr1 2161174 + EIF4G3 chr1 21415706 - Exonic hg19 SKCM TCGA-EE-A3AA-06A 2 2 CDS-5'UTR Intra-chr p36.33 Transcription factor p36.12 47040 ChimerSeq STARFusion TCGA_RNA-Seq EEF1A1-IGH@ EEF1A1 chr6 74228719 - IGH@ chr14 106331459 - Exonic hg19 SKCM TCGA-ER-A19D-06A 5 24 Out-of-frame Inter-chr q13 Tumor suppressor gene 32.33 47041 ChimerSeq STARFusion TCGA_RNA-Seq EEF1A1-IGHG3 EEF1A1 chr6 74228719 - IGHG3 chr14 106331459 - Exonic hg19 SKCM TCGA-ER-A19D-06A 5 12 Out-of-frame Inter-chr q13 Tumor suppressor gene 47042 ChimerSeq STARFusion TCGA_RNA-Seq C9orf85-FXN C9orf85 chr9 74526752 + FXN chr9 71679854 + Exonic hg19 SKCM TCGA-FS-A1ZP-06A 31 147 In-Frame Intra-chr q21.13 q21.11 Tumor suppressor gene Seq+ 47043 ChimerSeq STARFusion TCGA_RNA-Seq MPRIP-P4HA1 MPRIP chr17 16946285 + P4HA1 chr10 74790128 - Exonic hg19 SKCM TCGA-FW-A3TU-06A 2 11 Out-of-frame Inter-chr p11.2 q22.1 Seq+ 47044 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R12C-TSPAN4 PPP1R12C chr19 55610152 - TSPAN4 chr11 862550 + Exonic hg19 SKCM TCGA-FW-A3TU-06A 2 0 In-Frame Inter-chr q13.42 p15.5 47045 ChimerSeq STARFusion TCGA_RNA-Seq PFDN2-LOC400794 PFDN2 chr1 161087742 - LOC400794 chr1 165470864 - Exonic hg19 SKCM TCGA-DA-A1IA-06A 37 180 CDS-3'UTR Intra-chr q23.3 47046 ChimerSeq STARFusion TCGA_RNA-Seq PFDN2-LOC400794 PFDN2 chr1 161087742 - LOC400794 chr1 165451844 - Exonic hg19 SKCM TCGA-DA-A1IA-06A 12 180 CDS-3'UTR Intra-chr q23.3 47047 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2NL-UCK2 NOTCH2NL chr1 145209436 + UCK2 chr1 165859441 + Exonic hg19 SKCM TCGA-DA-A1IA-06A 10 32 5'UTR-CDS Intra-chr q21.1 q24.1 Seq+ 47048 ChimerSeq STARFusion TCGA_RNA-Seq LRRFIP1-DBF4B LRRFIP1 chr2 238536383 + DBF4B chr17 42800248 + Exonic hg19 SKCM TCGA-DA-A1IA-06A 9 25 Out-of-frame Inter-chr q37.3 q21.31 Seq+ 47049 ChimerSeq STARFusion TCGA_RNA-Seq BRAF-AGK BRAF chr7 140500162 - AGK chr7 141292946 + Exonic hg19 SKCM TCGA-DA-A1IA-06A 9 23 In-Frame Intra-chr q34 TKL:RAF Oncogene Seq+ 47050 ChimerSeq STARFusion TCGA_RNA-Seq PKM-SPARC PKM chr15 72502759 - SPARC chr5 151051168 - Exonic hg19 SKCM TCGA-DA-A1IA-06A 3 1 Out-of-frame Inter-chr q23 q33.1 Tumor suppressor gene 47051 ChimerSeq STARFusion TCGA_RNA-Seq ZNF786-DENND6B ZNF786 chr7 148771478 - DENND6B chr22 50757432 - Exonic hg19 SKCM TCGA-EB-A551-01A 19 21 Out-of-frame Inter-chr q36.1 Transcription factor q13.33 Seq+ 47052 ChimerSeq STARFusion TCGA_RNA-Seq PTPRF-C1orf222 PTPRF chr1 44003948 + C1orf222 chr1 1861775 - Exonic hg19 SKCM TCGA-EB-A551-01A 5 36 Out-of-frame Intra-chr p34.2 Seq+ 47053 ChimerSeq STARFusion TCGA_RNA-Seq LINC00297-UBL3 LINC00297 chr13 30462166 - UBL3 chr13 30351400 - Exonic hg19 SKCM TCGA-EB-A551-01A 4 5 Out-of-frame Intra-chr q12.3 q12.3 47054 ChimerSeq STARFusion TCGA_RNA-Seq IGDCC4-ORAI3 IGDCC4 chr15 65693144 - ORAI3 chr16 30967521 + Exonic hg19 SKCM TCGA-EB-A551-01A 2 9 CDS-3'UTR Inter-chr q22.31 p11.2 Seq+ 47055 ChimerSeq STARFusion TCGA_RNA-Seq PRPF38A-ABCD3 PRPF38A chr1 52871511 + ABCD3 chr1 94924163 + Exonic hg19 SKCM TCGA-EB-A551-01A 2 8 In-Frame Intra-chr p32.3 p21.3 Seq+ 47056 ChimerSeq STARFusion TCGA_RNA-Seq TSC1-AK8 TSC1 chr9 135819930 - AK8 chr9 135668162 - Exonic hg19 SKCM TCGA-DA-A1I2-06A 49 145 5'UTR-CDS Intra-chr q34.13 Oncogene Tumor suppressor gene q34.13 Seq+ 47057 ChimerSeq STARFusion TCGA_RNA-Seq TSC1-AK8 TSC1 chr9 135819930 - AK8 chr9 135602921 - Exonic hg19 SKCM TCGA-DA-A1I2-06A 33 142 5'UTR-CDS Intra-chr q34.13 Oncogene Tumor suppressor gene q34.13 Seq+ 47058 ChimerSeq STARFusion TCGA_RNA-Seq TSC1-AK8 TSC1 chr9 135819959 - AK8 chr9 135668162 - Exonic hg19 SKCM TCGA-DA-A1I2-06A 30 142 5'UTR-CDS Intra-chr q34.13 Oncogene Tumor suppressor gene q34.13 Seq+ 47059 ChimerSeq STARFusion TCGA_RNA-Seq TSC1-AK8 TSC1 chr9 135819959 - AK8 chr9 135602921 - Exonic hg19 SKCM TCGA-DA-A1I2-06A 25 142 5'UTR-CDS Intra-chr q34.13 Oncogene Tumor suppressor gene q34.13 Seq+ 47060 ChimerSeq STARFusion TCGA_RNA-Seq TSC1-AK8 TSC1 chr9 135819934 - AK8 chr9 135668162 - Exonic hg19 SKCM TCGA-DA-A1I2-06A 7 142 5'UTR-CDS Intra-chr q34.13 Oncogene Tumor suppressor gene q34.13 Seq+ 47061 ChimerSeq STARFusion TCGA_RNA-Seq ISL2-PEAK1 ISL2 chr15 76629282 + PEAK1 chr15 77474382 - Exonic hg19 SKCM TCGA-DA-A3F5-06A 11 79 CDS-5'UTR Intra-chr q24.3 Transcription factor q24.3 Seq+ 47062 ChimerSeq STARFusion TCGA_RNA-Seq ISL2-PEAK1 ISL2 chr15 76630308 + PEAK1 chr15 77474382 - Exonic hg19 SKCM TCGA-DA-A3F5-06A 7 79 CDS-5'UTR Intra-chr q24.3 Transcription factor q24.3 Seq+ 47063 ChimerSeq STARFusion TCGA_RNA-Seq PEAK1-PSTPIP1 PEAK1 chr15 77471132 - PSTPIP1 chr15 77317625 + Exonic hg19 SKCM TCGA-DA-A3F5-06A 12 57 In-Frame Intra-chr q24.3 q24.3 Seq+ 47064 ChimerSeq STARFusion TCGA_RNA-Seq ISL2-PEAK1 ISL2 chr15 76630855 + PEAK1 chr15 77474382 - Exonic hg19 SKCM TCGA-DA-A3F5-06A 2 79 CDS-5'UTR Intra-chr q24.3 Transcription factor q24.3 Seq+ 47065 ChimerSeq STARFusion TCGA_RNA-Seq IL27RA-RLN3 IL27RA chr19 14143315 + RLN3 chr19 14141522 + Exonic hg19 SKCM TCGA-DA-A3F5-06A 7 58 Out-of-frame Intra-chr p13.12 p13.12 Seq+ 47066 ChimerSeq STARFusion TCGA_RNA-Seq PEAK1-PSTPIP1 PEAK1 chr15 77712348 - PSTPIP1 chr15 77317625 + Exonic hg19 SKCM TCGA-DA-A3F5-06A 2 57 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 47067 ChimerSeq STARFusion TCGA_RNA-Seq RUNX1-IFNAR1 RUNX1 chr21 36206707 - IFNAR1 chr21 34725064 + Exonic hg19 SKCM TCGA-DA-A3F5-06A 2 33 Out-of-frame Intra-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q22.11 Seq+ 47068 ChimerSeq STARFusion TCGA_RNA-Seq NPTN-HMG20A NPTN chr15 73925466 - HMG20A chr15 77750746 + Exonic hg19 SKCM TCGA-DA-A3F5-06A 4 16 CDS-5'UTR Intra-chr q24.1 q24.3 Transcription factor Seq+ 47069 ChimerSeq STARFusion TCGA_RNA-Seq NRCAM-SHFM1 NRCAM chr7 108096687 - SHFM1 chr7 96324203 - Exonic hg19 SKCM TCGA-DA-A3F5-06A 2 9 5'UTR-CDS Intra-chr q31.1 Tumor suppressor gene 47070 ChimerSeq STARFusion TCGA_RNA-Seq EXOC3-TRIP13 EXOC3 chr5 447867 + TRIP13 chr5 894902 + Exonic hg19 SKCM TCGA-FR-A8YE-06A 4 33 Out-of-frame Intra-chr p15.33 p15.33 Seq+ 47071 ChimerSeq STARFusion TCGA_RNA-Seq SUB1-GHR SUB1 chr5 32599175 + GHR chr5 42565966 + Exonic hg19 SKCM TCGA-FR-A8YE-06A 3 11 In-Frame Intra-chr p13.3 p13.1 Seq+ 47072 ChimerSeq STARFusion TCGA_RNA-Seq SCP2-STXBP3 SCP2 chr1 53480715 + STXBP3 chr1 109336204 + Exonic hg19 SKCM TCGA-EE-A2M8-06A 4 23 Out-of-frame Intra-chr p32.3 p13.3 Seq+ 47073 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-NTNG1 WARS2 chr1 119618973 - NTNG1 chr1 108023233 + Exonic hg19 SKCM TCGA-D3-A5GS-06A 5 33 Out-of-frame Intra-chr p12 p13.3 Seq+ 47074 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-NTNG1 WARS2 chr1 119618973 - NTNG1 chr1 107979287 + Exonic hg19 SKCM TCGA-D3-A5GS-06A 4 33 Out-of-frame Intra-chr p12 p13.3 Seq+ 47075 ChimerSeq STARFusion TCGA_RNA-Seq AZIN1-ATP6V1C1 AZIN1 chr8 103870241 - ATP6V1C1 chr8 104053026 + Exonic hg19 SKCM TCGA-BF-A1PX-01A 4 10 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 47076 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-KRT16P3 EGFR chr7 55242522 + KRT16P3 chr17 20407422 - Exonic hg19 SKCM TCGA-BF-A1PX-01A 3 0 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene p11.2 47077 ChimerSeq STARFusion TCGA_RNA-Seq PPP6C-DENND1A PPP6C chr9 127933369 - DENND1A chr9 126285572 - Exonic hg19 SKCM TCGA-EE-A2MM-06A 3 13 Out-of-frame Intra-chr q33.3 q33.3 Seq+ 47078 ChimerSeq STARFusion TCGA_RNA-Seq ASXL1-TM9SF4 ASXL1 chr20 30956926 + TM9SF4 chr20 30720816 + Exonic hg19 STAD TCGA-VQ-A8E2-01A 70 22 In-Frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 47079 ChimerSeq STARFusion TCGA_RNA-Seq URI1-PLEKHF1 URI1 chr19 30477324 + PLEKHF1 chr19 30164731 + Exonic hg19 STAD TCGA-VQ-A8E2-01A 68 22 5'UTR-5'UTR Intra-chr q12 q12 Seq+ 47080 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-CASC11 PTK2 chr8 141840571 - CASC11 chr8 128746205 - Exonic hg19 STAD TCGA-VQ-A8E2-01A 49 21 Out-of-frame Intra-chr q24.3 q24.21 Seq+ 47081 ChimerSeq STARFusion TCGA_RNA-Seq BRAF-MRPS33 BRAF chr7 140624366 - MRPS33 chr7 140710460 - Exonic hg19 STAD TCGA-VQ-A8E2-01A 26 12 CDS-5'UTR Intra-chr q34 TKL:RAF Oncogene q34 Seq+ 47082 ChimerSeq STARFusion TCGA_RNA-Seq FOXRED2-IFT27 FOXRED2 chr22 36897288 - IFT27 chr22 37163906 - Exonic hg19 STAD TCGA-VQ-A8E2-01A 19 9 In-Frame Intra-chr q12.3 q12.3 Seq+ 47083 ChimerSeq STARFusion TCGA_RNA-Seq HIST1H2BD-MDN1 HIST1H2BD chr6 26158787 + MDN1 chr6 90360566 - Exonic hg19 STAD TCGA-VQ-A8E2-01A 11 5 3'UTR-CDS Intra-chr p22.2 q15 Seq+ 47084 ChimerSeq STARFusion TCGA_RNA-Seq PPM1H-FAM19A2 PPM1H chr12 63113951 - FAM19A2 chr12 62671410 - Exonic hg19 STAD TCGA-VQ-A8E2-01A 11 4 CDS-5'UTR Intra-chr q14.2 q14.1 Seq+ 47085 ChimerSeq STARFusion TCGA_RNA-Seq FAM114A1-DAB1 FAM114A1 chr4 38893451 + DAB1 chr1 58115337 - Exonic hg19 STAD TCGA-VQ-A8E2-01A 7 6 5'UTR-5'UTR Inter-chr p14 p32.1 Seq+ 47086 ChimerSeq STARFusion TCGA_RNA-Seq FOXRED2-IFT27 FOXRED2 chr22 36897288 - IFT27 chr22 37164223 - Exonic hg19 STAD TCGA-VQ-A8E2-01A 3 9 CDS-3'UTR Intra-chr q12.3 q12.3 Seq+ 47087 ChimerSeq STARFusion TCGA_RNA-Seq TMEM242-TIAM2 TMEM242 chr6 157739814 - TIAM2 chr6 155228864 + Exonic hg19 STAD TCGA-CD-5803-01A 9 1 CDS-5'UTR Intra-chr q25.3 q25.2 Seq+ 47088 ChimerSeq STARFusion TCGA_RNA-Seq HSPA8-SERPING1 HSPA8 chr11 122928589 - SERPING1 chr11 57369534 + Exonic hg19 STAD TCGA-CD-5803-01A 3 0 Out-of-frame Intra-chr q24.1 q12.1 47089 ChimerSeq STARFusion TCGA_RNA-Seq PARK2-CAP2 PARK2 chr6 163148694 - CAP2 chr6 17463227 + Exonic hg19 STAD TCGA-CD-5803-01A 3 0 Out-of-frame Intra-chr Tumor suppressor gene p22.3 47090 ChimerSeq STARFusion TCGA_RNA-Seq ZNF687-USP48 ZNF687 chr1 151254871 + USP48 chr1 22030885 - Exonic hg19 STAD TCGA-CD-5803-01A 3 0 5'UTR-CDS Intra-chr q21.3 Transcription factor p36.12 47091 ChimerSeq STARFusion TCGA_RNA-Seq ACACA-UBAP2L ACACA chr17 35715942 - UBAP2L chr1 154209042 + Exonic hg19 STAD TCGA-CD-5803-01A 2 0 5'UTR-CDS Inter-chr q21.3 47092 ChimerSeq STARFusion TCGA_RNA-Seq ARF1-SERPINB6 ARF1 chr1 228270466 + SERPINB6 chr6 2959576 - Exonic hg19 STAD TCGA-CD-5803-01A 2 0 5'UTR-5'UTR Inter-chr q42.13 Tumor suppressor gene p25.2 47093 ChimerSeq STARFusion TCGA_RNA-Seq CDK14-SEPT7P2 CDK14 chr7 90492584 + SEPT7P2 chr7 45798773 - Exonic hg19 STAD TCGA-CD-5803-01A 2 0 CDS-3'UTR Intra-chr q21.13 p12.3 47094 ChimerSeq STARFusion TCGA_RNA-Seq CLIC1-SEPT9 CLIC1 chr6 31707041 - SEPT9 chr17 75483506 + Exonic hg19 STAD TCGA-CD-5803-01A 2 0 5'UTR-CDS Inter-chr 47095 ChimerSeq STARFusion TCGA_RNA-Seq DUSP16-FAT1 DUSP16 chr12 12672796 - FAT1 chr4 187584767 - Exonic hg19 STAD TCGA-CD-5803-01A 2 0 In-Frame Inter-chr q35.2 Tumor suppressor gene 47096 ChimerSeq STARFusion TCGA_RNA-Seq EGFL7-NOTCH1 EGFL7 chr9 139559237 + NOTCH1 chr9 139417640 - Exonic hg19 STAD TCGA-CD-5803-01A 2 0 5'UTR-CDS Intra-chr q34.3 q34.3 Oncogene Tumor suppressor gene 47097 ChimerSeq STARFusion TCGA_RNA-Seq ENC1-SDK1 ENC1 chr5 73936132 - SDK1 chr7 4056803 + Exonic hg19 STAD TCGA-CD-5803-01A 2 0 5'UTR-CDS Inter-chr q13.3 p22.2 47098 ChimerSeq STARFusion TCGA_RNA-Seq FGD6-MAP4 FGD6 chr12 95611001 - MAP4 chr3 47919013 - Exonic hg19 STAD TCGA-CD-5803-01A 2 0 In-Frame Inter-chr q22 p21.31 47099 ChimerSeq STARFusion TCGA_RNA-Seq HIVEP2-AIG1 HIVEP2 chr6 143104658 - AIG1 chr6 143457972 + Exonic hg19 STAD TCGA-CD-5803-01A 2 0 5'UTR-CDS Intra-chr q24.2 Transcription factor q24.2 47100 ChimerSeq STARFusion TCGA_RNA-Seq METTL13-DNM3 METTL13 chr1 171783163 + DNM3 chr1 171890888 + Exonic hg19 STAD TCGA-CD-5803-01A 2 0 3'UTR-CDS Intra-chr q24.3 q24.3 47101 ChimerSeq STARFusion TCGA_RNA-Seq MYL6-DIABLO MYL6 chr12 56556115 + DIABLO chr12 122703322 - Exonic hg19 STAD TCGA-CD-5803-01A 2 0 Out-of-frame Intra-chr q13.2 q24.31 Tumor suppressor gene 47102 ChimerSeq STARFusion TCGA_RNA-Seq NRXN3-FERMT2 NRXN3 chr14 80271542 + FERMT2 chr14 53348187 - Exonic hg19 STAD TCGA-CD-5803-01A 2 0 In-Frame Intra-chr q24.3 q22.1 47103 ChimerSeq STARFusion TCGA_RNA-Seq PAPOLA-VRK1 PAPOLA chr14 97018959 + VRK1 chr14 97347514 + Exonic hg19 STAD TCGA-CD-5803-01A 2 0 Out-of-frame Intra-chr q32.2 q32.2 CK1:VRK 47104 ChimerSeq STARFusion TCGA_RNA-Seq POU2F1-MGMT POU2F1 chr1 167190195 + MGMT chr10 131334505 + Exonic hg19 STAD TCGA-CD-5803-01A 2 0 Out-of-frame Inter-chr q24.2 Transcription factor q26.3 47105 ChimerSeq STARFusion TCGA_RNA-Seq PPL-RFXANK PPL chr16 4986985 - RFXANK chr19 19303769 + Exonic hg19 STAD TCGA-CD-5803-01A 2 0 CDS-5'UTR Inter-chr p13.3 p13.11 47106 ChimerSeq STARFusion TCGA_RNA-Seq PRKCZ-RUNX3 PRKCZ chr1 2106752 + RUNX3 chr1 25233908 - Exonic hg19 STAD TCGA-CD-5803-01A 2 0 Out-of-frame Intra-chr p36.33 p36.11 Tumor suppressor gene Transcription factor 47107 ChimerSeq STARFusion TCGA_RNA-Seq PWWP2B-CAPRIN2 PWWP2B chr10 134219490 + CAPRIN2 chr12 30906493 - Exonic hg19 STAD TCGA-CD-5803-01A 2 0 Out-of-frame Inter-chr q26.3 p11.21 47108 ChimerSeq STARFusion TCGA_RNA-Seq RNF38-UBE2R2 RNF38 chr9 36487305 - UBE2R2 chr9 33886879 + Exonic hg19 STAD TCGA-CD-5803-01A 2 0 5'UTR-CDS Intra-chr p13.2 p13.3 47109 ChimerSeq STARFusion TCGA_RNA-Seq RPA1-NPIPA5 RPA1 chr17 1787238 + NPIPA5 chr16 15463976 - Exonic hg19 STAD TCGA-CD-5803-01A 2 0 Out-of-frame Inter-chr p13.3 Tumor suppressor gene p13.11 47110 ChimerSeq STARFusion TCGA_RNA-Seq RPS4X-MCTP1 RPS4X chrX 71494903 - MCTP1 chr5 94134837 - Exonic hg19 STAD TCGA-CD-5803-01A 2 0 3'UTR-CDS Inter-chr q13.1 q15 47111 ChimerSeq STARFusion TCGA_RNA-Seq SLC35E3-NUP107 SLC35E3 chr12 69140559 + NUP107 chr12 69109407 + Exonic hg19 STAD TCGA-CD-5803-01A 2 0 In-Frame Intra-chr q15 q15 47112 ChimerSeq STARFusion TCGA_RNA-Seq SORBS1-BAG2 SORBS1 chr10 97321077 - BAG2 chr6 57046830 + Exonic hg19 STAD TCGA-CD-5803-01A 2 0 5'UTR-CDS Inter-chr q24.1 p12.1 47113 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF1-PNP TM9SF1 chr14 24661377 - PNP chr14 20944543 + Exonic hg19 STAD TCGA-CD-5803-01A 2 0 In-Frame Intra-chr q12 q11.2 Oncogene 47114 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF1-PNP TM9SF1 chr14 24661377 - PNP chr14 20944543 + Exonic hg19 STAD TCGA-CD-5803-01A 2 0 In-Frame Intra-chr q12 q11.2 Oncogene 47115 ChimerSeq STARFusion TCGA_RNA-Seq TNFRSF10D-UBE2V2 TNFRSF10D chr8 23012387 - UBE2V2 chr8 48955593 + Exonic hg19 STAD TCGA-CD-5803-01A 2 0 In-Frame Intra-chr p21.3 q11.21 47116 ChimerSeq STARFusion TCGA_RNA-Seq TXNRD1-SLC41A2 TXNRD1 chr12 104682818 + SLC41A2 chr12 105199115 - Exonic hg19 STAD TCGA-CD-5803-01A 2 0 In-Frame Intra-chr q23.3 q23.3 Seq+ 47117 ChimerSeq STARFusion TCGA_RNA-Seq UTRN-YEATS2 UTRN chr6 144613043 + YEATS2 chr3 183490093 + Exonic hg19 STAD TCGA-CD-5803-01A 2 0 Out-of-frame Inter-chr q24.2 q27.1 47118 ChimerSeq STARFusion TCGA_RNA-Seq WWOX-RTF1 WWOX chr16 78198186 + RTF1 chr15 41745099 + Exonic hg19 STAD TCGA-CD-5803-01A 2 0 In-Frame Inter-chr q23.1 Tumor suppressor gene q15.1 47119 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-GSPT1 ZC3H7A chr16 11857334 - GSPT1 chr16 11967028 - Exonic hg19 STAD TCGA-CD-5803-01A 2 0 In-Frame Intra-chr p13.13 p13.13 Seq+ 47120 ChimerSeq STARFusion TCGA_RNA-Seq TULP4-WDR27 TULP4 chr6 158882761 + WDR27 chr6 169857729 - Exonic hg19 STAD TCGA-D7-6520-01A 57 0 In-Frame Intra-chr q25.3 q27 Seq+ 47121 ChimerSeq STARFusion TCGA_RNA-Seq CERS6-NOSTRIN CERS6 chr2 169313128 + NOSTRIN chr2 169690737 + Exonic hg19 STAD TCGA-D7-6520-01A 29 0 Out-of-frame Intra-chr q24.3 Seq+ 47122 ChimerSeq STARFusion TCGA_RNA-Seq CERK-TOP3B CERK chr22 47133904 - TOP3B chr22 22317265 - Exonic hg19 STAD TCGA-D7-6520-01A 12 1 In-Frame Intra-chr q13.31 q11.22 47123 ChimerSeq STARFusion TCGA_RNA-Seq GRAMD4-IL2RB GRAMD4 chr22 47033857 + IL2RB chr22 37540245 - Exonic hg19 STAD TCGA-D7-6520-01A 11 0 CDS-5'UTR Intra-chr q13.31 q12.3 Seq+ 47124 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890980 - BCAR4 chr16 11914154 - Exonic hg19 STAD TCGA-BR-6565-01A 36 0 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 47125 ChimerSeq STARFusion TCGA_RNA-Seq PLA2G4E-IGKC PLA2G4E chr15 42274286 - IGKC chr2 89161069 - Exonic hg19 STAD TCGA-BR-6565-01A 30 0 Out-of-frame Inter-chr q15.1 p11.2 47126 ChimerSeq STARFusion TCGA_RNA-Seq PLA2G4E-IGKJ2 PLA2G4E chr15 42274286 - IGKJ2 chr2 89161069 - Exonic hg19 STAD TCGA-BR-6565-01A 30 0 Out-of-frame Inter-chr q15.1 p11.2 47127 ChimerSeq STARFusion TCGA_RNA-Seq PISD-SFI1 PISD chr22 32046685 - SFI1 chr22 32007129 + Exonic hg19 STAD TCGA-BR-6565-01A 13 0 5'UTR-CDS Intra-chr q12.2 q12.2 47128 ChimerSeq STARFusion TCGA_RNA-Seq PLA2G4E-IGKC PLA2G4E chr15 42274287 - IGKC chr2 89161431 - Exonic hg19 STAD TCGA-BR-6565-01A 13 0 Out-of-frame Inter-chr q15.1 p11.2 47129 ChimerSeq STARFusion TCGA_RNA-Seq PLA2G4E-IGKJ1 PLA2G4E chr15 42274287 - IGKJ1 chr2 89161431 - Exonic hg19 STAD TCGA-BR-6565-01A 13 0 Out-of-frame Inter-chr q15.1 p11.2 47130 ChimerSeq STARFusion TCGA_RNA-Seq RACGAP1-LIMA1 RACGAP1 chr12 50410414 - LIMA1 chr12 50594667 - Exonic hg19 STAD TCGA-CG-4438-01A 24 41 Out-of-frame Intra-chr q13.12 q13.12 Tumor suppressor gene Seq+ 47131 ChimerSeq STARFusion TCGA_RNA-Seq GNGT1-CCDC132 GNGT1 chr7 93221083 + CCDC132 chr7 92921015 + Exonic hg19 STAD TCGA-CG-4438-01A 11 49 5'UTR-CDS Intra-chr q21.3 47132 ChimerSeq STARFusion TCGA_RNA-Seq GNGT1-CCDC132 GNGT1 chr7 93230727 + CCDC132 chr7 92921015 + Exonic hg19 STAD TCGA-CG-4438-01A 3 49 5'UTR-CDS Intra-chr q21.3 47133 ChimerSeq STARFusion TCGA_RNA-Seq ANKIB1-PEX1 ANKIB1 chr7 91948826 + PEX1 chr7 92138725 - Exonic hg19 STAD TCGA-CG-4438-01A 10 13 In-Frame Intra-chr q21.2 q21.2 Seq+ 47134 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-HAUS8 CEACAM5 chr19 42233234 + HAUS8 chr19 17184668 - Exonic hg19 STAD TCGA-CG-4438-01A 9 2 Out-of-frame Intra-chr q13.2 p13.11 47135 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-HAUS8 CEACAM5 chr19 42233228 + HAUS8 chr19 17184674 - Exonic hg19 STAD TCGA-CG-4438-01A 8 2 Out-of-frame Intra-chr q13.2 p13.11 47136 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF12-POU2F3 ARHGEF12 chr11 120207984 + POU2F3 chr11 120186070 + Exonic hg19 STAD TCGA-CG-4438-01A 2 14 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene Transcription factor Seq+ 47137 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K14-PRIM2 MAP3K14 chr17 43394326 - PRIM2 chr6 57244699 + Exonic hg19 STAD TCGA-CG-4438-01A 2 14 5'UTR-CDS Inter-chr q21.31 p11.2 47138 ChimerSeq STARFusion TCGA_RNA-Seq METTL9-NPIPB9 METTL9 chr16 21611219 + NPIPB9 chr16 28777403 + Exonic hg19 STAD TCGA-CG-4438-01A 3 0 Out-of-frame Intra-chr p11.2 47139 ChimerSeq STARFusion TCGA_RNA-Seq NUDT1-HACE1 NUDT1 chr7 2289637 + HACE1 chr6 105272782 - Exonic hg19 STAD TCGA-CG-4438-01A 3 0 Out-of-frame Inter-chr p22.3 q16.3 Tumor suppressor gene 47140 ChimerSeq STARFusion TCGA_RNA-Seq ITGAV-FAM171B ITGAV chr2 187498101 + FAM171B chr2 187604955 + Exonic hg19 STAD TCGA-CG-4438-01A 2 3 In-Frame Intra-chr q32.1 Tumor suppressor gene q32.1 47141 ChimerSeq STARFusion TCGA_RNA-Seq CDK19-AMD1 CDK19 chr6 111067329 - AMD1 chr6 111210060 + Exonic hg19 STAD TCGA-CG-4441-01A 303 6 Out-of-frame Intra-chr q21 q21 Seq+ 47142 ChimerSeq STARFusion TCGA_RNA-Seq PPM1D-BCAS3 PPM1D chr17 58678247 + BCAS3 chr17 59445688 + Exonic hg19 STAD TCGA-CG-4441-01A 77 0 In-Frame Intra-chr q23.2 q23.2 47143 ChimerSeq STARFusion TCGA_RNA-Seq SLC30A5-MRPS36P1 SLC30A5 chr5 68411234 + MRPS36P1 chr3 6814991 - Exonic hg19 STAD TCGA-CG-4441-01A 72 1 Out-of-frame Inter-chr q13.1 p26.1 47144 ChimerSeq STARFusion TCGA_RNA-Seq GRAMD4-TBC1D22A GRAMD4 chr22 47022858 + TBC1D22A chr22 47370186 + Exonic hg19 STAD TCGA-CG-4441-01A 62 4 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 47145 ChimerSeq STARFusion TCGA_RNA-Seq LIN54-SEC31A LIN54 chr4 83900036 - SEC31A chr4 83750211 - Exonic hg19 STAD TCGA-CG-4441-01A 57 0 In-Frame Intra-chr q21.22 Transcription factor q21.22 Seq+ 47146 ChimerSeq STARFusion TCGA_RNA-Seq GRAMD4-TBC1D22A GRAMD4 chr22 47022858 + TBC1D22A chr22 47393530 + Exonic hg19 STAD TCGA-CG-4441-01A 41 4 In-Frame Intra-chr q13.31 q13.31 Seq+ 47147 ChimerSeq STARFusion TCGA_RNA-Seq ARID4B-TOMM20 ARID4B chr1 235416045 - TOMM20 chr1 235275423 - Exonic hg19 STAD TCGA-CG-4441-01A 39 0 In-Frame Intra-chr q42.3 q42.3 Seq+ 47148 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2B-POMT1 PRRC2B chr9 134269650 + POMT1 chr9 134381790 + Exonic hg19 STAD TCGA-CG-4441-01A 29 1 5'UTR-5'UTR Intra-chr q34.13 q34.13 Seq+ 47149 ChimerSeq STARFusion TCGA_RNA-Seq HELLS-CYP2C19 HELLS chr10 96314005 + CYP2C19 chr10 96580253 + Exonic hg19 STAD TCGA-CG-4441-01A 25 0 In-Frame Intra-chr q23.33 q23.33 Oncogene 47150 ChimerSeq STARFusion TCGA_RNA-Seq ACOT7-CHD5 ACOT7 chr1 6378552 - CHD5 chr1 6228337 - Exonic hg19 STAD TCGA-CG-4441-01A 24 0 In-Frame Intra-chr p36.31 p36.31 Tumor suppressor gene 47151 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0232-TBC1D14 KIAA0232 chr4 6843931 + TBC1D14 chr4 6995911 + Exonic hg19 STAD TCGA-CG-4441-01A 23 0 In-Frame Intra-chr p16.1 p16.1 Seq+ 47152 ChimerSeq STARFusion TCGA_RNA-Seq MICU1-DNAJB12 MICU1 chr10 74385768 - DNAJB12 chr10 74104885 - Exonic hg19 STAD TCGA-CG-4441-01A 23 0 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 47153 ChimerSeq STARFusion TCGA_RNA-Seq CNST-SCCPDH CNST chr1 246755243 + SCCPDH chr1 246890194 + Exonic hg19 STAD TCGA-CG-4441-01A 21 0 In-Frame Intra-chr q44 q44 47154 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2B-POMT1 PRRC2B chr9 134269650 + POMT1 chr9 134381501 + Exonic hg19 STAD TCGA-CG-4441-01A 15 1 5'UTR-5'UTR Intra-chr q34.13 q34.13 Seq+ 47155 ChimerSeq STARFusion TCGA_RNA-Seq ZFR-MTMR12 ZFR chr5 32406879 - MTMR12 chr5 32276848 - Exonic hg19 STAD TCGA-CG-4441-01A 15 0 In-Frame Intra-chr p13.3 p13.3 47156 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-TRAP1 CREBBP chr16 3900298 - TRAP1 chr16 3740986 - Exonic hg19 STAD TCGA-CG-4441-01A 12 0 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 47157 ChimerSeq STARFusion TCGA_RNA-Seq GRAMD4-TBC1D22A GRAMD4 chr22 47022858 + TBC1D22A chr22 47370188 + Exonic hg19 STAD TCGA-CG-4441-01A 8 4 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 47158 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106111129 - Exonic hg19 STAD TCGA-RD-A8N9-01A 140 0 Out-of-frame Inter-chr q37.3 47159 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106209410 - Exonic hg19 STAD TCGA-RD-A8N9-01A 109 0 Out-of-frame Inter-chr q37.3 47160 ChimerSeq STARFusion TCGA_RNA-Seq KIF26A-C14orf2 KIF26A chr14 104605625 + C14orf2 chr14 104379031 - Exonic hg19 STAD TCGA-RD-A8N9-01A 15 5 Out-of-frame Intra-chr q32.33 q32.33 Seq+ 47161 ChimerSeq STARFusion TCGA_RNA-Seq FBXL3-MYCBP2 FBXL3 chr13 77600962 - MYCBP2 chr13 77752089 - Exonic hg19 STAD TCGA-RD-A8N9-01A 12 4 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 47162 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 STAD TCGA-RD-A8N9-01A 13 0 Out-of-frame Inter-chr q13.33 p21.1 47163 ChimerSeq STARFusion TCGA_RNA-Seq USP6NL-ITIH5 USP6NL chr10 11551594 - ITIH5 chr10 7697638 - Exonic hg19 STAD TCGA-BR-8058-01A 14 5 In-Frame Intra-chr p14 p14 Seq+ 47164 ChimerSeq STARFusion TCGA_RNA-Seq FOXJ3-EIF4G3 FOXJ3 chr1 42801297 - EIF4G3 chr1 21268823 - Exonic hg19 STAD TCGA-BR-8058-01A 11 8 5'UTR-CDS Intra-chr p34.2 Transcription factor p36.12 Seq+ 47165 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-PELI3 UVRAG chr11 75623083 + PELI3 chr11 66240712 + Exonic hg19 STAD TCGA-BR-8058-01A 9 2 Out-of-frame Intra-chr q13.5 Tumor suppressor gene q13.2 47166 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125699 - CXCL16 chr17 4637313 - Exonic hg19 STAD TCGA-BR-8058-01A 9 0 Out-of-frame Inter-chr q12.2 p13.2 47167 ChimerSeq STARFusion TCGA_RNA-Seq JSRP1-ACTG1 JSRP1 chr19 2269567 - ACTG1 chr17 79479818 - Exonic hg19 STAD TCGA-BR-8058-01A 6 0 Out-of-frame Inter-chr p13.3 q25.3 47168 ChimerSeq STARFusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 + TACC3 chr4 1741429 + Exonic hg19 STAD TCGA-BR-8058-01A 4 0 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 47169 ChimerSeq STARFusion TCGA_RNA-Seq CNIH3-WDR26 CNIH3 chr1 224622486 + WDR26 chr1 224621879 - Exonic hg19 STAD TCGA-BR-8058-01A 3 1 Out-of-frame Intra-chr q42.12 q42.12 47170 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL3-IFI6 RN7SL3 chr14 50320401 - IFI6 chr1 27992764 - Exonic hg19 STAD TCGA-BR-8058-01A 3 1 Out-of-frame Inter-chr q21.3 p35.3 47171 ChimerSeq STARFusion TCGA_RNA-Seq LCP1-KRT8 LCP1 chr13 46700588 - KRT8 chr12 53293753 - Exonic hg19 STAD TCGA-BR-8058-01A 3 0 Out-of-frame Inter-chr q14.13 q13.13 47172 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL5P-ADCY9 RN7SL5P chr9 9442233 + ADCY9 chr16 4033924 - Exonic hg19 STAD TCGA-BR-8058-01A 3 0 Out-of-frame Inter-chr p23 p13.3 47173 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80954854 - MRPS28 chr8 80831382 - Exonic hg19 STAD TCGA-BR-8058-01A 3 0 Out-of-frame Intra-chr q21.13 q21.13 47174 ChimerSeq STARFusion TCGA_RNA-Seq WASL-SND1 WASL chr7 123388672 - SND1 chr7 127484377 + Exonic hg19 STAD TCGA-BR-8058-01A 3 0 In-Frame Intra-chr q31.32 q32.1 47175 ChimerSeq STARFusion TCGA_RNA-Seq ZFYVE16-ACTB ZFYVE16 chr5 79747459 + ACTB chr7 5570218 - Exonic hg19 STAD TCGA-BR-8058-01A 3 0 Out-of-frame Inter-chr q14.1 p22.1 47176 ChimerSeq STARFusion TCGA_RNA-Seq MPPED2-BTBD10 MPPED2 chr11 30516843 - BTBD10 chr11 13466728 - Exonic hg19 STAD TCGA-BR-8058-01A 2 1 CDS-5'UTR Intra-chr p14.1 p15.3 47177 ChimerSeq STARFusion TCGA_RNA-Seq ADAP1-SUN1 ADAP1 chr7 959605 - SUN1 chr7 888055 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 CDS-3'UTR Intra-chr p22.3 p22.3 Seq+ 47178 ChimerSeq STARFusion TCGA_RNA-Seq ANXA4-SMU1 ANXA4 chr2 70047953 + SMU1 chr9 33053288 - Exonic hg19 STAD TCGA-BR-8058-01A 2 0 5'UTR-CDS Inter-chr p13.3 p21.1 47179 ChimerSeq STARFusion TCGA_RNA-Seq APTX-NSUN3 APTX chr9 32988081 - NSUN3 chr3 93802951 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 3'UTR-CDS Inter-chr p21.1 q11.2 47180 ChimerSeq STARFusion TCGA_RNA-Seq ARID1B-WTAP ARID1B chr6 157100605 + WTAP chr6 160157290 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 CDS-5'UTR Intra-chr q25.3 Oncogene q25.3 Seq+ 47181 ChimerSeq STARFusion TCGA_RNA-Seq ARPC4-GNG10 ARPC4 chr3 9843440 + GNG10 chr9 114431549 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 CDS-3'UTR Inter-chr p25.3 q31.3 47182 ChimerSeq STARFusion TCGA_RNA-Seq ATG4B-SEC23IP ATG4B chr2 242606253 + SEC23IP chr10 121678956 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 In-Frame Inter-chr q37.3 q26.11 47183 ChimerSeq STARFusion TCGA_RNA-Seq BID-SREBF2 BID chr22 18257147 - SREBF2 chr22 42296334 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 5'UTR-CDS Intra-chr q11.21 q13.2 Transcription factor 47184 ChimerSeq STARFusion TCGA_RNA-Seq C12orf76-SP1 C12orf76 chr12 110486168 - SP1 chr12 53775443 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 CDS-5'UTR Intra-chr q24.11 q13.13 Transcription factor 47185 ChimerSeq STARFusion TCGA_RNA-Seq CBL-SMG1 CBL chr11 119103405 + SMG1 chr16 18866226 - Exonic hg19 STAD TCGA-BR-8058-01A 2 0 Out-of-frame Inter-chr q23.3 Oncogene Tumor suppressor gene p12.3 Atypical:PIKK 47186 ChimerSeq STARFusion TCGA_RNA-Seq CBX5-PDLIM5 CBX5 chr12 54673792 - PDLIM5 chr4 95506716 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 5'UTR-5'UTR Inter-chr q13.13 Tumor suppressor gene q22.3 47187 ChimerSeq STARFusion TCGA_RNA-Seq CLCN3-PTPN18 CLCN3 chr4 170542214 + PTPN18 chr2 131126706 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 5'UTR-CDS Inter-chr q33 q21.1 47188 ChimerSeq STARFusion TCGA_RNA-Seq COPS2-RTKN2 COPS2 chr15 49447722 - RTKN2 chr10 63964781 - Exonic hg19 STAD TCGA-BR-8058-01A 2 0 In-Frame Inter-chr q21.1 Tumor suppressor gene q21.2 47189 ChimerSeq STARFusion TCGA_RNA-Seq COQ2-NEDD4L COQ2 chr4 84200101 - NEDD4L chr18 56008270 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 In-Frame Inter-chr q21.23 q21.31 Tumor suppressor gene 47190 ChimerSeq STARFusion TCGA_RNA-Seq COX19-SUN1 COX19 chr7 959605 - SUN1 chr7 888055 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 Out-of-frame Intra-chr p22.3 p22.3 47191 ChimerSeq STARFusion TCGA_RNA-Seq CTBP2-CCSER2 CTBP2 chr10 126848888 - CCSER2 chr10 86223689 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 Out-of-frame Intra-chr q26.13 q23.1 47192 ChimerSeq STARFusion TCGA_RNA-Seq CYP3A5-ATP2A2 CYP3A5 chr7 99272156 - ATP2A2 chr12 110788097 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 Out-of-frame Inter-chr q22.1 q24.11 47193 ChimerSeq STARFusion TCGA_RNA-Seq DESI1-TCF20 DESI1 chr22 42016756 - TCF20 chr22 42611347 - Exonic hg19 STAD TCGA-BR-8058-01A 2 0 Out-of-frame Intra-chr q13.2 Transcription factor 47194 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB4-GIPC2 DNAJB4 chr1 78444977 + GIPC2 chr1 78546359 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 5'UTR-CDS Intra-chr p31.1 Tumor suppressor gene p31.1 47195 ChimerSeq STARFusion TCGA_RNA-Seq EPCAM-CAPRIN1 EPCAM chr2 47604216 + CAPRIN1 chr11 34107611 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 In-Frame Inter-chr p21 p13 47196 ChimerSeq STARFusion TCGA_RNA-Seq GNPTG-ATP6V0E1 GNPTG chr16 1402307 + ATP6V0E1 chr5 172461402 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 CDS-3'UTR Inter-chr p13.3 q35.1 47197 ChimerSeq STARFusion TCGA_RNA-Seq HERC1-MBNL1 HERC1 chr15 64126026 - MBNL1 chr3 152132730 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 5'UTR-CDS Inter-chr q22.31 q25.1 47198 ChimerSeq STARFusion TCGA_RNA-Seq HIPK1-HSPA4 HIPK1 chr1 114511270 + HSPA4 chr5 132403109 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 Out-of-frame Inter-chr p13.2 CMGC:DYRK q31.1 47199 ChimerSeq STARFusion TCGA_RNA-Seq HOXC9-NOC4L HOXC9 chr12 54389333 + NOC4L chr12 132635526 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 5'UTR-CDS Intra-chr q13.13 Transcription factor q24.33 47200 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0355-TTC3 KIAA0355 chr19 34745519 + TTC3 chr21 38480692 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 5'UTR-CDS Inter-chr q22.13 47201 ChimerSeq STARFusion TCGA_RNA-Seq KLF5-PIBF1 KLF5 chr13 73638021 + PIBF1 chr13 73539412 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 Out-of-frame Intra-chr q22.1 Tumor suppressor gene Transcription factor q21.33 Seq+ 47202 ChimerSeq STARFusion TCGA_RNA-Seq KLHL2-STK24 KLHL2 chr4 166160051 + STK24 chr13 99171727 - Exonic hg19 STAD TCGA-BR-8058-01A 2 0 In-Frame Inter-chr q32.3 q32.2 47203 ChimerSeq STARFusion TCGA_RNA-Seq KLHL25-FARP1 KLHL25 chr15 86337997 - FARP1 chr13 98865474 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 5'UTR-5'UTR Inter-chr q25.3 q32.2 47204 ChimerSeq STARFusion TCGA_RNA-Seq LARP4B-POLH LARP4B chr10 930387 - POLH chr6 43565433 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 Out-of-frame Inter-chr p15.3 p21.1 47205 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-TCF12 MATR3 chr5 138629717 + TCF12 chr15 57458600 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 Out-of-frame Inter-chr q31.2 q21.3 Oncogene Transcription factor 47206 ChimerSeq STARFusion TCGA_RNA-Seq MED8-HSPA14 MED8 chr1 43850717 - HSPA14 chr10 14890608 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 In-Frame Inter-chr p34.2 p13 47207 ChimerSeq STARFusion TCGA_RNA-Seq MGLL-EEFSEC MGLL chr3 127500632 - EEFSEC chr3 127965679 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 In-Frame Intra-chr q21.3 q21.3 Seq+ 47208 ChimerSeq STARFusion TCGA_RNA-Seq MYL6-DDB1 MYL6 chr12 56553514 + DDB1 chr11 61081441 - Exonic hg19 STAD TCGA-BR-8058-01A 2 0 In-Frame Inter-chr q13.2 q12.2 47209 ChimerSeq STARFusion TCGA_RNA-Seq NANOS3-SAMD1 NANOS3 chr19 13973008 + SAMD1 chr19 14200174 - Exonic hg19 STAD TCGA-BR-8058-01A 2 0 5'UTR-CDS Intra-chr p13.12 p13.12 47210 ChimerSeq STARFusion TCGA_RNA-Seq NR3C1-TNFAIP8 NR3C1 chr5 142779221 - TNFAIP8 chr5 118728511 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 Out-of-frame Intra-chr q31.3 Transcription factor q23.1 47211 ChimerSeq STARFusion TCGA_RNA-Seq NTN1-STX8 NTN1 chr17 8926708 + STX8 chr17 9153962 - Exonic hg19 STAD TCGA-BR-8058-01A 2 0 In-Frame Intra-chr p13.1 p13.1 Seq+ 47212 ChimerSeq STARFusion TCGA_RNA-Seq PDPK1-CPPED1 PDPK1 chr16 2607964 + CPPED1 chr16 12758972 - Exonic hg19 STAD TCGA-BR-8058-01A 2 0 Out-of-frame Intra-chr p13.3 p13.12 47213 ChimerSeq STARFusion TCGA_RNA-Seq PFKP-ZMYND11 PFKP chr10 3109899 + ZMYND11 chr10 225934 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 CDS-5'UTR Intra-chr p15.2 p15.3 Tumor suppressor gene 47214 ChimerSeq STARFusion TCGA_RNA-Seq PHF3-CLEC2D PHF3 chr6 64390062 + CLEC2D chr12 9833519 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 In-Frame Inter-chr q12 p13.31 47215 ChimerSeq STARFusion TCGA_RNA-Seq PIPOX-CBX3 PIPOX chr17 27280426 + CBX3 chr7 26242591 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 5'UTR-5'UTR Inter-chr q11.2 p15.2 47216 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R12C-PNPLA7 PPP1R12C chr19 55610152 - PNPLA7 chr9 140358908 - Exonic hg19 STAD TCGA-BR-8058-01A 2 0 In-Frame Inter-chr q13.42 q34.3 47217 ChimerSeq STARFusion TCGA_RNA-Seq QRSL1-FAM120B QRSL1 chr6 107077580 + FAM120B chr6 170697375 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 In-Frame Intra-chr q21 47218 ChimerSeq STARFusion TCGA_RNA-Seq RAB3GAP2-LRBA RAB3GAP2 chr1 220445565 - LRBA chr4 151738409 - Exonic hg19 STAD TCGA-BR-8058-01A 2 0 Out-of-frame Inter-chr q41 q31.3 47219 ChimerSeq STARFusion TCGA_RNA-Seq RB1-ITM2B RB1 chr13 48955579 + ITM2B chr13 48827944 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 In-Frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Seq+ 47220 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-LAPTM5 RCC1 chr1 28832596 + LAPTM5 chr1 31215396 - Exonic hg19 STAD TCGA-BR-8058-01A 2 0 5'UTR-CDS Intra-chr p35.3 p35.2 47221 ChimerSeq STARFusion TCGA_RNA-Seq RHOA-LGALS4 RHOA chr3 49449253 - LGALS4 chr19 39294535 - Exonic hg19 STAD TCGA-BR-8058-01A 2 0 5'UTR-CDS Inter-chr p21.31 Oncogene Tumor suppressor gene 47222 ChimerSeq STARFusion TCGA_RNA-Seq SH3BP2-NOP14 SH3BP2 chr4 2794865 + NOP14 chr4 2956290 - Exonic hg19 STAD TCGA-BR-8058-01A 2 0 5'UTR-CDS Intra-chr p16.3 p16.3 47223 ChimerSeq STARFusion TCGA_RNA-Seq SHFM1-EXOC4 SHFM1 chr7 96324110 - EXOC4 chr7 133160082 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 Out-of-frame Intra-chr q33 47224 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-LAPTM5 SNHG3 chr1 28832596 + LAPTM5 chr1 31215396 - Exonic hg19 STAD TCGA-BR-8058-01A 2 0 5'UTR-CDS Intra-chr p35.3 p35.2 47225 ChimerSeq STARFusion TCGA_RNA-Seq SREBF2-B3GNTL1 SREBF2 chr22 42271728 + B3GNTL1 chr17 81006661 - Exonic hg19 STAD TCGA-BR-8058-01A 2 0 In-Frame Inter-chr q13.2 Transcription factor 47226 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-DYRK1A SSH2 chr17 28022477 - DYRK1A chr21 38877586 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 In-Frame Inter-chr q11.2 q22.13 CMGC:DYRK 47227 ChimerSeq STARFusion TCGA_RNA-Seq STAU1-SUCLA2 STAU1 chr20 47752370 - SUCLA2 chr13 48563116 - Exonic hg19 STAD TCGA-BR-8058-01A 2 0 Out-of-frame Inter-chr q13.13 q14.2 47228 ChimerSeq STARFusion TCGA_RNA-Seq TAF1D-MARC1 TAF1D chr11 93470230 - MARC1 chr1 220969985 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 In-Frame Inter-chr q21 q41 47229 ChimerSeq STARFusion TCGA_RNA-Seq TAX1BP1-RPRD1A TAX1BP1 chr7 27856657 + RPRD1A chr18 33573263 - Exonic hg19 STAD TCGA-BR-8058-01A 2 0 In-Frame Inter-chr p15.2 q12.2 47230 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D5-NIPA2 TBC1D5 chr3 17783973 - NIPA2 chr15 23021429 - Exonic hg19 STAD TCGA-BR-8058-01A 2 0 5'UTR-5'UTR Inter-chr p24.3 q11.2 47231 ChimerSeq STARFusion TCGA_RNA-Seq TMEM165-UCHL3 TMEM165 chr4 56262563 + UCHL3 chr13 76169051 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 In-Frame Inter-chr q12 q22.2 47232 ChimerSeq STARFusion TCGA_RNA-Seq TRIQK-CCDC25 TRIQK chr8 93966634 - CCDC25 chr8 27593762 - Exonic hg19 STAD TCGA-BR-8058-01A 2 0 5'UTR-CDS Intra-chr q22.1 p21.1 47233 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-CCDC14 ZBTB20 chr3 114866066 - CCDC14 chr3 123634565 - Exonic hg19 STAD TCGA-BR-8058-01A 2 0 5'UTR-CDS Intra-chr q13.31 Transcription factor q21.1 47234 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7B-TOM1 ZC3H7B chr22 41697776 + TOM1 chr22 35734706 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 5'UTR-5'UTR Intra-chr q13.2 q12.3 47235 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC17-DNM1L ZDHHC17 chr12 77158109 + DNM1L chr12 32854349 + Exonic hg19 STAD TCGA-BR-8058-01A 2 0 In-Frame Intra-chr q21.2 p11.21 47236 ChimerSeq STARFusion TCGA_RNA-Seq ZNF106-EHD4 ZNF106 chr15 42783178 - EHD4 chr15 42193379 - Exonic hg19 STAD TCGA-BR-8058-01A 2 0 Out-of-frame Intra-chr q15.1 q15.1 47237 ChimerSeq STARFusion TCGA_RNA-Seq ZNF407-MBP ZNF407 chr18 72265173 + MBP chr18 74729224 - Exonic hg19 STAD TCGA-BR-8058-01A 2 0 5'UTR-CDS Intra-chr q22.3 Transcription factor q23 47238 ChimerSeq STARFusion TCGA_RNA-Seq TAF6L-SCGB1A1 TAF6L chr11 62543942 + SCGB1A1 chr11 62189693 + Exonic hg19 STAD TCGA-VQ-A8DV-01A 65 84 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 47239 ChimerSeq STARFusion TCGA_RNA-Seq TAF6L-SCGB1A1 TAF6L chr11 62545807 + SCGB1A1 chr11 62189693 + Exonic hg19 STAD TCGA-VQ-A8DV-01A 63 84 In-Frame Intra-chr q12.3 q12.3 Seq+ 47240 ChimerSeq STARFusion TCGA_RNA-Seq HP1BP3-PINK1 HP1BP3 chr1 21103090 - PINK1 chr1 20970983 + Exonic hg19 STAD TCGA-VQ-A8DV-01A 47 12 In-Frame Intra-chr p36.12 p36.12 Other:NKF2 Seq+ 47241 ChimerSeq STARFusion TCGA_RNA-Seq TAF6L-SCGB1A1 TAF6L chr11 62545600 + SCGB1A1 chr11 62189693 + Exonic hg19 STAD TCGA-VQ-A8DV-01A 24 84 In-Frame Intra-chr q12.3 q12.3 Seq+ 47242 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 STAD TCGA-VQ-A8DV-01A 43 0 Out-of-frame Inter-chr q13.33 p21.1 47243 ChimerSeq STARFusion TCGA_RNA-Seq TAF6L-SCGB1A1 TAF6L chr11 62543942 + SCGB1A1 chr11 62190531 + Exonic hg19 STAD TCGA-VQ-A8DV-01A 7 84 In-Frame Intra-chr q12.3 q12.3 Seq+ 47244 ChimerSeq STARFusion TCGA_RNA-Seq KDM1A-TMEM115 KDM1A chr1 23346440 + TMEM115 chr3 50392978 - Exonic hg19 STAD TCGA-VQ-A8DV-01A 22 15 Out-of-frame Inter-chr p36.12 p21.31 Seq+ 47245 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-PDZD2 ZFAND3 chr6 37787792 + PDZD2 chr5 32061108 + Exonic hg19 STAD TCGA-VQ-A8DV-01A 13 3 In-Frame Inter-chr p21.2 p13.3 Seq+ 47246 ChimerSeq STARFusion TCGA_RNA-Seq USP48-C1orf63 USP48 chr1 22079485 - C1orf63 chr1 25580428 - Exonic hg19 STAD TCGA-BR-4201-01A 6 32 CDS-5'UTR Intra-chr p36.12 47247 ChimerSeq STARFusion TCGA_RNA-Seq USP48-C1orf63 USP48 chr1 22083039 - C1orf63 chr1 25580428 - Exonic hg19 STAD TCGA-BR-4201-01A 4 32 CDS-5'UTR Intra-chr p36.12 47248 ChimerSeq STARFusion TCGA_RNA-Seq SYF2-USP48 SYF2 chr1 25553933 - USP48 chr1 22084276 - Exonic hg19 STAD TCGA-BR-4201-01A 5 12 In-Frame Intra-chr p36.11 p36.12 Seq+ 47249 ChimerSeq STARFusion TCGA_RNA-Seq API5-BACH1 API5 chr11 43333746 + BACH1 chr21 30693542 + Exonic hg19 STAD TCGA-BR-4201-01A 2 0 5'UTR-5'UTR Inter-chr p12 q21.3 Transcription factor 47250 ChimerSeq STARFusion TCGA_RNA-Seq PLXNB1-ALDOA PLXNB1 chr3 48471417 - ALDOA chr16 30078555 + Exonic hg19 STAD TCGA-BR-4201-01A 2 0 5'UTR-5'UTR Inter-chr p21.31 p11.2 Seq+ 47251 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-DAND5 DNM2 chr19 10870487 + DAND5 chr19 13084203 + Exonic hg19 STAD TCGA-IN-A6RI-01A 145 98 Out-of-frame Intra-chr p13.2 p13.13 Seq+ 47252 ChimerSeq STARFusion TCGA_RNA-Seq TAF3-ATP5C1 TAF3 chr10 7866523 + ATP5C1 chr10 7840953 + Exonic hg19 STAD TCGA-IN-A6RI-01A 138 49 In-Frame Intra-chr p14 p14 Seq+ 47253 ChimerSeq STARFusion TCGA_RNA-Seq AP1M2-CACNA1A AP1M2 chr19 10694282 - CACNA1A chr19 13566003 - Exonic hg19 STAD TCGA-IN-A6RI-01A 38 32 Out-of-frame Intra-chr p13.2 p13.13 Seq+ 47254 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-CYSTM1 ANKHD1 chr5 139876863 + CYSTM1 chr5 139622890 + Exonic hg19 STAD TCGA-IN-A6RI-01A 34 37 In-Frame Intra-chr q31.3 q31.3 47255 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-CYSTM1 ANKHD1 chr5 139866645 + CYSTM1 chr5 139622890 + Exonic hg19 STAD TCGA-IN-A6RI-01A 33 37 In-Frame Intra-chr q31.3 q31.3 47256 ChimerSeq STARFusion TCGA_RNA-Seq NFIX-RFX1 NFIX chr19 13106678 + RFX1 chr19 14088898 - Exonic hg19 STAD TCGA-IN-A6RI-01A 22 12 In-Frame Intra-chr p13.13 Transcription factor p13.12 Transcription factor Seq+ 47257 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-NFIX DNM2 chr19 10870487 + NFIX chr19 13135835 + Exonic hg19 STAD TCGA-IN-A6RI-01A 17 15 Out-of-frame Intra-chr p13.2 p13.13 Transcription factor Seq+ 47258 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-RFX1 DNM2 chr19 10870487 + RFX1 chr19 14088898 - Exonic hg19 STAD TCGA-IN-A6RI-01A 10 9 Out-of-frame Intra-chr p13.2 p13.12 Transcription factor Seq+ 47259 ChimerSeq STARFusion TCGA_RNA-Seq RRBP1-BFSP1 RRBP1 chr20 17662673 - BFSP1 chr20 17505553 - Exonic hg19 STAD TCGA-IN-A6RI-01A 7 12 5'UTR-CDS Intra-chr p12.1 p12.1 Seq+ 47260 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-TRAPPC9 AGO2 chr8 141551263 - TRAPPC9 chr8 140999044 - Exonic hg19 STAD TCGA-IN-A6RI-01A 7 6 Out-of-frame Intra-chr q24.3 q24.3 47261 ChimerSeq STARFusion TCGA_RNA-Seq RRBP1-BFSP1 RRBP1 chr20 17660644 - BFSP1 chr20 17505553 - Exonic hg19 STAD TCGA-IN-A6RI-01A 6 10 5'UTR-CDS Intra-chr p12.1 p12.1 Seq+ 47262 ChimerSeq STARFusion TCGA_RNA-Seq MIR638-DAND5 MIR638 chr19 10870487 + DAND5 chr19 13084203 + Exonic hg19 STAD TCGA-IN-A6RI-01A 6 6 3'UTR-CDS Intra-chr p13.2 p13.13 47263 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-NFIX DNM2 chr19 10870487 + NFIX chr19 13103772 + Exonic hg19 STAD TCGA-IN-A6RI-01A 3 13 CDS-5'UTR Intra-chr p13.2 p13.13 Transcription factor Seq+ 47264 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-NFIX DNM2 chr19 10870487 + NFIX chr19 13183861 + Exonic hg19 STAD TCGA-IN-A6RI-01A 3 13 In-Frame Intra-chr p13.2 p13.13 Transcription factor Seq+ 47265 ChimerSeq STARFusion TCGA_RNA-Seq RRBP1-BFSP1 RRBP1 chr20 17662673 - BFSP1 chr20 17543740 - Exonic hg19 STAD TCGA-IN-A6RI-01A 2 10 5'UTR-5'UTR Intra-chr p12.1 p12.1 Seq+ 47266 ChimerSeq STARFusion TCGA_RNA-Seq PSMA4-RINL PSMA4 chr15 78841245 + RINL chr19 39362510 - Exonic hg19 STAD TCGA-FP-8211-01A 22 7 In-Frame Inter-chr q25.1 47267 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1279-DDX21 KIAA1279 chr10 70749014 + DDX21 chr10 70731647 + Exonic hg19 STAD TCGA-FP-8211-01A 12 6 In-Frame Intra-chr q22.1 47268 ChimerSeq STARFusion TCGA_RNA-Seq PSMA4-RINL PSMA4 chr15 78839040 + RINL chr19 39362510 - Exonic hg19 STAD TCGA-FP-8211-01A 9 7 In-Frame Inter-chr q25.1 47269 ChimerSeq STARFusion TCGA_RNA-Seq SON-IFNAR1 SON chr21 34923595 + IFNAR1 chr21 34707830 + Exonic hg19 STAD TCGA-FP-8211-01A 6 4 In-Frame Intra-chr q22.11 Transcription factor q22.11 47270 ChimerSeq STARFusion TCGA_RNA-Seq PHB2-EMG1 PHB2 chr12 7076334 - EMG1 chr12 7083501 + Exonic hg19 STAD TCGA-FP-8211-01A 5 6 In-Frame Intra-chr p13.31 p13.31 47271 ChimerSeq STARFusion TCGA_RNA-Seq ANG-AKR1C3 ANG chr14 21152917 + AKR1C3 chr10 5077620 + Exonic hg19 STAD TCGA-FP-8211-01A 4 0 3'UTR-5'UTR Inter-chr q11.2 p15.1 47272 ChimerSeq STARFusion TCGA_RNA-Seq LIMCH1-NSUN7 LIMCH1 chr4 41362953 + NSUN7 chr4 40776282 + Exonic hg19 STAD TCGA-FP-8211-01A 3 4 Out-of-frame Intra-chr p13 p14 47273 ChimerSeq STARFusion TCGA_RNA-Seq RNASE4-AKR1C3 RNASE4 chr14 21152917 + AKR1C3 chr10 5077620 + Exonic hg19 STAD TCGA-FP-8211-01A 4 0 5'UTR-5'UTR Inter-chr q11.2 p15.1 47274 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A12-ATAD3A SLC25A12 chr2 172749727 - ATAD3A chr1 1463137 + Exonic hg19 STAD TCGA-FP-8211-01A 3 1 Out-of-frame Inter-chr q31.1 p36.33 47275 ChimerSeq STARFusion TCGA_RNA-Seq ANXA5-ZNF536 ANXA5 chr4 122589395 - ZNF536 chr19 31039222 + Exonic hg19 STAD TCGA-FP-8211-01A 3 0 Out-of-frame Inter-chr q27 q12 Transcription factor 47276 ChimerSeq STARFusion TCGA_RNA-Seq C19orf52-HYAL2 C19orf52 chr19 11044164 + HYAL2 chr3 50357317 - Exonic hg19 STAD TCGA-FP-8211-01A 3 0 Out-of-frame Inter-chr p21.31 47277 ChimerSeq STARFusion TCGA_RNA-Seq CHMP1A-FBXO31 CHMP1A chr16 89713069 - FBXO31 chr16 87362055 - Exonic hg19 STAD TCGA-FP-8211-01A 3 0 Out-of-frame Intra-chr q24.3 q24.2 Tumor suppressor gene 47278 ChimerSeq STARFusion TCGA_RNA-Seq CYSTM1-ISLR CYSTM1 chr5 139554870 + ISLR chr15 74468911 + Exonic hg19 STAD TCGA-FP-8211-01A 3 0 5'UTR-3'UTR Inter-chr q31.3 q24.1 47279 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-snoU13 GNB1 chr1 1716739 - snoU13 chr5 149408918 - Exonic hg19 STAD TCGA-FP-8211-01A 3 0 Out-of-frame Inter-chr p36.33 47280 ChimerSeq STARFusion TCGA_RNA-Seq GPR124-TRAPPC5 GPR124 chr8 37701316 + TRAPPC5 chr19 7747123 + Exonic hg19 STAD TCGA-FP-8211-01A 3 0 Out-of-frame Inter-chr p13.2 47281 ChimerSeq STARFusion TCGA_RNA-Seq LY75-RN7SL2 LY75 chr2 160660949 - RN7SL2 chr14 50329510 - Exonic hg19 STAD TCGA-FP-8211-01A 3 0 Out-of-frame Inter-chr q24.2 q21.3 47282 ChimerSeq STARFusion TCGA_RNA-Seq NRDE2-GRIN1 NRDE2 chr14 90770600 - GRIN1 chr9 140052831 + Exonic hg19 STAD TCGA-FP-8211-01A 3 0 Out-of-frame Inter-chr q32.11 q34.3 47283 ChimerSeq STARFusion TCGA_RNA-Seq POFUT1-FGGY POFUT1 chr20 30797995 + FGGY chr1 60223603 + Exonic hg19 STAD TCGA-FP-8211-01A 3 0 In-Frame Inter-chr q11.21 p32.1 47284 ChimerSeq STARFusion TCGA_RNA-Seq RPS14-RRBP1 RPS14 chr5 149827221 - RRBP1 chr20 17595519 - Exonic hg19 STAD TCGA-FP-8211-01A 3 0 Out-of-frame Inter-chr q33.1 p12.1 47285 ChimerSeq STARFusion TCGA_RNA-Seq PLCG1-TOP1 PLCG1 chr20 39765675 + TOP1 chr20 39750336 + Exonic hg19 STAD TCGA-FP-8211-01A 2 2 5'UTR-CDS Intra-chr q12 Oncogene q12 Oncogene 47286 ChimerSeq STARFusion TCGA_RNA-Seq CDYL2-PTPRM CDYL2 chr16 80838047 - PTPRM chr18 8244056 + Exonic hg19 STAD TCGA-FP-8211-01A 2 1 Out-of-frame Inter-chr q23.2 p11.23 47287 ChimerSeq STARFusion TCGA_RNA-Seq PDE7A-GAS2 PDE7A chr8 66691955 - GAS2 chr11 22696396 + Exonic hg19 STAD TCGA-FP-8211-01A 2 1 CDS-5'UTR Inter-chr q13.1 p14.3 47288 ChimerSeq STARFusion TCGA_RNA-Seq AGR2-ERO1L AGR2 chr7 16841282 - ERO1L chr14 53124868 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 In-Frame Inter-chr p21.1 47289 ChimerSeq STARFusion TCGA_RNA-Seq CCND3-C6orf89 CCND3 chr6 42016239 - C6orf89 chr6 36867202 + Exonic hg19 STAD TCGA-FP-8211-01A 2 0 5'UTR-CDS Intra-chr p21.1 p21.2 Seq+ 47290 ChimerSeq STARFusion TCGA_RNA-Seq CHRM3-UBE2N CHRM3 chr1 239550527 + UBE2N chr12 93805075 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 5'UTR-CDS Inter-chr q43 q22 47291 ChimerSeq STARFusion TCGA_RNA-Seq CSNK2A1-SLC52A3 CSNK2A1 chr20 524316 - SLC52A3 chr20 746469 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 5'UTR-5'UTR Intra-chr p13 Oncogene p13 47292 ChimerSeq STARFusion TCGA_RNA-Seq CTCF-GTF2I CTCF chr16 67605167 + GTF2I chr7 74103458 + Exonic hg19 STAD TCGA-FP-8211-01A 2 0 5'UTR-5'UTR Inter-chr q22.1 Tumor suppressor gene Transcription factor q11.23 Transcription factor 47293 ChimerSeq STARFusion TCGA_RNA-Seq CYTH1-SEPT9 CYTH1 chr17 76676272 - SEPT9 chr17 75478226 + Exonic hg19 STAD TCGA-FP-8211-01A 2 0 Out-of-frame Intra-chr q25.3 47294 ChimerSeq STARFusion TCGA_RNA-Seq DIAPH2-AMOT DIAPH2 chrX 95940189 + AMOT chrX 112048320 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 Out-of-frame Intra-chr q21.33 q23 47295 ChimerSeq STARFusion TCGA_RNA-Seq EFNA1-ARNTL2 EFNA1 chr1 155100545 + ARNTL2 chr12 27521195 + Exonic hg19 STAD TCGA-FP-8211-01A 2 0 Out-of-frame Inter-chr q22 p11.23 Transcription factor Seq+ 47296 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-NUDT8 ERBB2 chr17 37872192 + NUDT8 chr11 67396522 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 Out-of-frame Inter-chr q12 Oncogene q13.2 47297 ChimerSeq STARFusion TCGA_RNA-Seq FPGT-EZH2 FPGT chr1 74667094 + EZH2 chr7 148512638 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 Out-of-frame Inter-chr p31.1 q36.1 Oncogene Tumor suppressor gene 47298 ChimerSeq STARFusion TCGA_RNA-Seq GNB4-POLA1 GNB4 chr3 179169134 - POLA1 chrX 24906123 + Exonic hg19 STAD TCGA-FP-8211-01A 2 0 5'UTR-CDS Inter-chr q26.33 p22.11 47299 ChimerSeq STARFusion TCGA_RNA-Seq GPSM2-FIP1L1 GPSM2 chr1 109419850 + FIP1L1 chr4 54265897 + Exonic hg19 STAD TCGA-FP-8211-01A 2 0 5'UTR-CDS Inter-chr p13.3 q12 47300 ChimerSeq STARFusion TCGA_RNA-Seq GRHPR-PTTG1IP GRHPR chr9 37432135 + PTTG1IP chr21 46276279 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 In-Frame Inter-chr p13.2 q22.3 47301 ChimerSeq STARFusion TCGA_RNA-Seq HAUS4-FBXO46 HAUS4 chr14 23424309 - FBXO46 chr19 46216831 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 CDS-5'UTR Inter-chr q11.2 q13.32 47302 ChimerSeq STARFusion TCGA_RNA-Seq HIP1R-HSP90B1 HIP1R chr12 123319553 + HSP90B1 chr12 104335610 + Exonic hg19 STAD TCGA-FP-8211-01A 2 0 5'UTR-CDS Intra-chr q24.31 q23.3 Tumor suppressor gene 47303 ChimerSeq STARFusion TCGA_RNA-Seq HK1-FUS HK1 chr10 71103745 + FUS chr16 31199646 + Exonic hg19 STAD TCGA-FP-8211-01A 2 0 In-Frame Inter-chr q22.1 p11.2 Tumor suppressor gene 47304 ChimerSeq STARFusion TCGA_RNA-Seq HUWE1-FAM156A HUWE1 chrX 53674311 - FAM156A chrX 52984444 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 CDS-5'UTR Intra-chr p11.22 p11.22 Seq+ 47305 ChimerSeq STARFusion TCGA_RNA-Seq IK-NDUFA2 IK chr5 140028122 + NDUFA2 chr5 140025263 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 Out-of-frame Intra-chr q31.3 q31.3 47306 ChimerSeq STARFusion TCGA_RNA-Seq LIPH-PKM LIPH chr3 185270211 - PKM chr15 72511451 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 Out-of-frame Inter-chr q27.2 q23 47307 ChimerSeq STARFusion TCGA_RNA-Seq LMTK2-ONECUT3 LMTK2 chr7 97784188 + ONECUT3 chr19 1775152 + Exonic hg19 STAD TCGA-FP-8211-01A 2 0 Out-of-frame Inter-chr q21.3 p13.3 Transcription factor 47308 ChimerSeq STARFusion TCGA_RNA-Seq LRRN1-PCDP1 LRRN1 chr3 3841603 + PCDP1 chr2 120303661 + Exonic hg19 STAD TCGA-FP-8211-01A 2 0 5'UTR-5'UTR Inter-chr p26.2 Seq+ 47309 ChimerSeq STARFusion TCGA_RNA-Seq LYN-EXT1 LYN chr8 56854550 + EXT1 chr8 118842588 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 In-Frame Intra-chr q12.1 TK:Src q24.11 Oncogene Tumor suppressor gene 47310 ChimerSeq STARFusion TCGA_RNA-Seq MROH1-CLTB MROH1 chr8 145255444 + CLTB chr5 175819946 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 Out-of-frame Inter-chr q24.3 q35.2 47311 ChimerSeq STARFusion TCGA_RNA-Seq MTG1-MGMT MTG1 chr10 135216277 + MGMT chr10 131362043 + Exonic hg19 STAD TCGA-FP-8211-01A 2 0 Out-of-frame Intra-chr q26.3 q26.3 47312 ChimerSeq STARFusion TCGA_RNA-Seq MTMR1-MAGEA8 MTMR1 chrX 149924337 + MAGEA8 chrX 149012847 + Exonic hg19 STAD TCGA-FP-8211-01A 2 0 CDS-5'UTR Intra-chr q28 q28 47313 ChimerSeq STARFusion TCGA_RNA-Seq MTPAP-NDUFS6 MTPAP chr10 30629155 - NDUFS6 chr5 1814453 + Exonic hg19 STAD TCGA-FP-8211-01A 2 0 In-Frame Inter-chr p11.23 p15.33 47314 ChimerSeq STARFusion TCGA_RNA-Seq MUC13-HN1 MUC13 chr3 124641044 - HN1 chr17 73132345 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 In-Frame Inter-chr q21.2 47315 ChimerSeq STARFusion TCGA_RNA-Seq NCEH1-ESYT2 NCEH1 chr3 172428637 - ESYT2 chr7 158591763 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 In-Frame Inter-chr q26.31 q36.3 47316 ChimerSeq STARFusion TCGA_RNA-Seq NDUFB5-MRPL47 NDUFB5 chr3 179322727 + MRPL47 chr3 179306783 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 Out-of-frame Intra-chr q26.33 q26.33 47317 ChimerSeq STARFusion TCGA_RNA-Seq PARP4-SNX6 PARP4 chr13 25086844 - SNX6 chr14 35078948 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 5'UTR-5'UTR Inter-chr q12.12 q13.1 47318 ChimerSeq STARFusion TCGA_RNA-Seq PCGF3-GAK PCGF3 chr4 699759 + GAK chr4 898562 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 5'UTR-CDS Intra-chr p16.3 p16.3 Other:NAK 47319 ChimerSeq STARFusion TCGA_RNA-Seq PDZD8-SLC25A17 PDZD8 chr10 119100491 - SLC25A17 chr22 41175129 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 Out-of-frame Inter-chr q26.11 q13.2 47320 ChimerSeq STARFusion TCGA_RNA-Seq PIGN-CCNI PIGN chr18 59854077 - CCNI chr4 77987558 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 5'UTR-5'UTR Inter-chr q21.33 q21.1 47321 ChimerSeq STARFusion TCGA_RNA-Seq PPP3CA-STMN1 PPP3CA chr4 102267896 - STMN1 chr1 26231229 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 CDS-5'UTR Inter-chr q24 p36.11 47322 ChimerSeq STARFusion TCGA_RNA-Seq PPP4C-HSPD1 PPP4C chr16 30092631 + HSPD1 chr2 198353971 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 In-Frame Inter-chr p11.2 q33.1 Tumor suppressor gene 47323 ChimerSeq STARFusion TCGA_RNA-Seq RPL5-SFPQ RPL5 chr1 93297674 + SFPQ chr1 35643637 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 CDS-3'UTR Intra-chr p22.1 Tumor suppressor gene p34.3 47324 ChimerSeq STARFusion TCGA_RNA-Seq SCFD2-FIP1L1 SCFD2 chr4 54139993 - FIP1L1 chr4 54319087 + Exonic hg19 STAD TCGA-FP-8211-01A 2 0 Out-of-frame Intra-chr q12 q12 Seq+ 47325 ChimerSeq STARFusion TCGA_RNA-Seq SP1-SMIM14 SP1 chr12 53777406 + SMIM14 chr4 39606800 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 Out-of-frame Inter-chr q13.13 Transcription factor p14 47326 ChimerSeq STARFusion TCGA_RNA-Seq SSFA2-RBM3 SSFA2 chr2 182781154 + RBM3 chrX 48433556 + Exonic hg19 STAD TCGA-FP-8211-01A 2 0 CDS-5'UTR Inter-chr q31.3 p11.23 47327 ChimerSeq STARFusion TCGA_RNA-Seq ST6GALNAC1-UQCRC2 ST6GALNAC1 chr17 74639590 - UQCRC2 chr16 21974082 + Exonic hg19 STAD TCGA-FP-8211-01A 2 0 In-Frame Inter-chr q25.1 47328 ChimerSeq STARFusion TCGA_RNA-Seq TARS2-QARS TARS2 chr1 150464965 + QARS chr3 49133512 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 In-Frame Inter-chr q21.2 p21.31 47329 ChimerSeq STARFusion TCGA_RNA-Seq TCEB1-STAU2 TCEB1 chr8 74884312 - STAU2 chr8 74495065 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 5'UTR-CDS Intra-chr q21.11 Seq+ 47330 ChimerSeq STARFusion TCGA_RNA-Seq TMEM18-GAK TMEM18 chr2 677289 - GAK chr4 898567 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 Out-of-frame Inter-chr p25.3 p16.3 Other:NAK 47331 ChimerSeq STARFusion TCGA_RNA-Seq TNNI3K-EZH2 TNNI3K chr1 74667094 + EZH2 chr7 148512638 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 5'UTR-CDS Inter-chr p31.1 q36.1 Oncogene Tumor suppressor gene 47332 ChimerSeq STARFusion TCGA_RNA-Seq TOP1-TMPRSS3 TOP1 chr20 39658095 + TMPRSS3 chr21 43810146 - Exonic hg19 STAD TCGA-FP-8211-01A 2 0 In-Frame Inter-chr q12 Oncogene q22.3 47333 ChimerSeq STARFusion TCGA_RNA-Seq USP9Y-TTTY15 USP9Y chrY 14821476 + TTTY15 chrY 14798442 + Exonic hg19 STAD TCGA-FP-8211-01A 2 0 CDS-5'UTR Intra-chr q11.221 q11.221 KB Pub 47334 ChimerSeq STARFusion TCGA_RNA-Seq VPS37A-WSB1 VPS37A chr8 17143936 + WSB1 chr17 25639236 + Exonic hg19 STAD TCGA-FP-8211-01A 2 0 3'UTR-CDS Inter-chr p22 q11.1 47335 ChimerSeq STARFusion TCGA_RNA-Seq WDR59-DAZAP1 WDR59 chr16 75018862 - DAZAP1 chr19 1417499 + Exonic hg19 STAD TCGA-FP-8211-01A 2 0 Out-of-frame Inter-chr q23.1 p13.3 47336 ChimerSeq STARFusion TCGA_RNA-Seq ZFP1-IGKC ZFP1 chr16 75183096 + IGKC chr2 89160433 - Exonic hg19 STAD TCGA-BR-8363-01A 124 0 Out-of-frame Inter-chr q23.1 Transcription factor p11.2 47337 ChimerSeq STARFusion TCGA_RNA-Seq ZFP1-IGKJ4 ZFP1 chr16 75183096 + IGKJ4 chr2 89160433 - Exonic hg19 STAD TCGA-BR-8363-01A 124 0 Out-of-frame Inter-chr q23.1 Transcription factor p11.2 Seq+ 47338 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525072 - IGHG1 chr14 106209410 - Exonic hg19 STAD TCGA-BR-8363-01A 19 0 Out-of-frame Inter-chr q34 Oncogene q32.33 47339 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL1-PIGR RN7SL1 chr14 50053383 + PIGR chr1 207102860 - Exonic hg19 STAD TCGA-BR-8588-01A 4 13 Out-of-frame Inter-chr q21.3 q32.1 47340 ChimerSeq STARFusion TCGA_RNA-Seq CTSE-PGA4 CTSE chr1 206328774 + PGA4 chr11 61015906 + Exonic hg19 STAD TCGA-BR-8588-01A 5 4 Out-of-frame Inter-chr q32.1 q12.2 47341 ChimerSeq STARFusion TCGA_RNA-Seq CTSE-PGA5 CTSE chr1 206328774 + PGA5 chr11 61015906 + Exonic hg19 STAD TCGA-BR-8588-01A 5 4 Out-of-frame Inter-chr q32.1 q12.2 47342 ChimerSeq STARFusion TCGA_RNA-Seq ENO3-PGA3 ENO3 chr17 4851674 + PGA3 chr11 60970989 + Exonic hg19 STAD TCGA-BR-8588-01A 3 8 Out-of-frame Inter-chr p13.2 q12.2 47343 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL1-PIGR RN7SL1 chr14 50053469 + PIGR chr1 207102866 - Exonic hg19 STAD TCGA-BR-8588-01A 3 8 Out-of-frame Inter-chr q21.3 q32.1 47344 ChimerSeq STARFusion TCGA_RNA-Seq PGA3-CALD1 PGA3 chr11 61011752 + CALD1 chr7 134632247 + Exonic hg19 STAD TCGA-BR-8588-01A 3 5 Out-of-frame Inter-chr q12.2 q33 47345 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL1-PIGR RN7SL1 chr14 50053354 + PIGR chr1 207102857 - Exonic hg19 STAD TCGA-BR-8588-01A 3 5 Out-of-frame Inter-chr q21.3 q32.1 47346 ChimerSeq STARFusion TCGA_RNA-Seq DOCK5-CDCA2 DOCK5 chr8 25101273 + CDCA2 chr8 25317756 + Exonic hg19 STAD TCGA-BR-8683-01A 14 4 CDS-5'UTR Intra-chr p21.2 p21.2 Seq+ 47347 ChimerSeq STARFusion TCGA_RNA-Seq GSN-CNTRL GSN chr9 124065343 + CNTRL chr9 123852553 + Exonic hg19 STAD TCGA-BR-8683-01A 9 5 Out-of-frame Intra-chr q33.2 Tumor suppressor gene q33.2 47348 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-HAUS8 CEACAM5 chr19 42233228 + HAUS8 chr19 17184674 - Exonic hg19 STAD TCGA-BR-8683-01A 6 0 Out-of-frame Intra-chr q13.2 p13.11 47349 ChimerSeq STARFusion TCGA_RNA-Seq XPO5-HSP90AB1 XPO5 chr6 43523573 - HSP90AB1 chr6 44220782 + Exonic hg19 STAD TCGA-BR-8683-01A 2 11 Out-of-frame Intra-chr p21.1 Tumor suppressor gene p21.1 Oncogene 47350 ChimerSeq STARFusion TCGA_RNA-Seq GTF2A2-GCNT3 GTF2A2 chr15 59949536 - GCNT3 chr15 59903987 + Exonic hg19 STAD TCGA-BR-8683-01A 3 4 Out-of-frame Intra-chr q22.2 q22.2 47351 ChimerSeq STARFusion TCGA_RNA-Seq MFAP3-GALNT10 MFAP3 chr5 153529506 + GALNT10 chr5 153674376 + Exonic hg19 STAD TCGA-BR-8683-01A 3 2 3'UTR-CDS Intra-chr q33.2 q33.2 47352 ChimerSeq STARFusion TCGA_RNA-Seq DOCK5-CDCA2 DOCK5 chr8 25101273 + CDCA2 chr8 25317900 + Exonic hg19 STAD TCGA-BR-8683-01A 2 4 In-Frame Intra-chr p21.2 p21.2 Seq+ 47353 ChimerSeq STARFusion TCGA_RNA-Seq STK4-PI3 STK4 chr20 43653771 + PI3 chr20 43804502 + Exonic hg19 STAD TCGA-BR-8683-01A 3 0 Out-of-frame Intra-chr q13.12 q13.12 47354 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-MYO16 PTK2 chr8 141993941 - MYO16 chr13 109699264 + Exonic hg19 STAD TCGA-BR-8683-01A 2 2 5'UTR-CDS Inter-chr q24.3 47355 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-MYO16 PTK2 chr8 142011224 - MYO16 chr13 109699264 + Exonic hg19 STAD TCGA-BR-8683-01A 2 2 5'UTR-CDS Inter-chr q24.3 47356 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-AP1G1 CEACAM5 chr19 42224127 + AP1G1 chr16 71767062 - Exonic hg19 STAD TCGA-BR-8683-01A 2 1 Out-of-frame Inter-chr q13.2 q22.2 47357 ChimerSeq STARFusion TCGA_RNA-Seq TMED3-KIAA1024 TMED3 chr15 79606347 + KIAA1024 chr15 79748440 + Exonic hg19 STAD TCGA-BR-8683-01A 2 1 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 47358 ChimerSeq STARFusion TCGA_RNA-Seq ADAM15-GALE ADAM15 chr1 155033308 + GALE chr1 24125926 - Exonic hg19 STAD TCGA-BR-8683-01A 2 0 CDS-5'UTR Intra-chr q21.3 p36.11 47359 ChimerSeq STARFusion TCGA_RNA-Seq C14orf105-PTPN2 C14orf105 chr14 57942300 - PTPN2 chr18 12859253 - Exonic hg19 STAD TCGA-BR-8683-01A 2 0 Out-of-frame Inter-chr q22.3 p11.21 Tumor suppressor gene 47360 ChimerSeq STARFusion TCGA_RNA-Seq C19orf25-CTDSP2 C19orf25 chr19 1478653 - CTDSP2 chr12 58223379 - Exonic hg19 STAD TCGA-BR-8683-01A 2 0 Out-of-frame Inter-chr p13.3 q14.1 47361 ChimerSeq STARFusion TCGA_RNA-Seq CCDC91-TASP1 CCDC91 chr12 28343574 + TASP1 chr20 13463984 - Exonic hg19 STAD TCGA-BR-8683-01A 2 0 5'UTR-CDS Inter-chr p11.22 p12.1 47362 ChimerSeq STARFusion TCGA_RNA-Seq CLN6-ARL6IP5 CLN6 chr15 68510874 - ARL6IP5 chr3 69150990 + Exonic hg19 STAD TCGA-BR-8683-01A 2 0 Out-of-frame Inter-chr q23 p14.1 Tumor suppressor gene 47363 ChimerSeq STARFusion TCGA_RNA-Seq CPED1-TNIK CPED1 chr7 120629924 + TNIK chr3 170946010 - Exonic hg19 STAD TCGA-BR-8683-01A 2 0 Out-of-frame Inter-chr q31.31 q26.31 STE:STE20 47364 ChimerSeq STARFusion TCGA_RNA-Seq CYB5B-NFAT5 CYB5B chr16 69482047 + NFAT5 chr16 69660306 + Exonic hg19 STAD TCGA-BR-8683-01A 2 0 Out-of-frame Intra-chr q22.1 q22.1 Transcription factor 47365 ChimerSeq STARFusion TCGA_RNA-Seq EHBP1L1-VMP1 EHBP1L1 chr11 65358063 + VMP1 chr17 57917129 + Exonic hg19 STAD TCGA-BR-8683-01A 2 0 Out-of-frame Inter-chr q13.1 q23.1 47366 ChimerSeq STARFusion TCGA_RNA-Seq GRSF1-NARF GRSF1 chr4 71697256 - NARF chr17 80443373 + Exonic hg19 STAD TCGA-BR-8683-01A 2 0 In-Frame Inter-chr q13.3 q25.3 47367 ChimerSeq STARFusion TCGA_RNA-Seq GTDC1-ARHGAP35 GTDC1 chr2 144899449 - ARHGAP35 chr19 47491246 + Exonic hg19 STAD TCGA-BR-8683-01A 2 0 Out-of-frame Inter-chr q22.3 q13.32 Transcription factor 47368 ChimerSeq STARFusion TCGA_RNA-Seq HCG18-TRIM26 HCG18 chr6 30294131 - TRIM26 chr6 30172542 - Exonic hg19 STAD TCGA-BR-8683-01A 2 0 3'UTR-5'UTR Intra-chr Seq+ 47369 ChimerSeq STARFusion TCGA_RNA-Seq HINFP-GLB1 HINFP chr11 119003929 + GLB1 chr3 33095041 - Exonic hg19 STAD TCGA-BR-8683-01A 2 0 Out-of-frame Inter-chr q23.3 Transcription factor p22.3 47370 ChimerSeq STARFusion TCGA_RNA-Seq LAMA5-PTMS LAMA5 chr20 60937456 - PTMS chr12 6878769 + Exonic hg19 STAD TCGA-BR-8683-01A 2 0 In-Frame Inter-chr q13.33 p13.31 47371 ChimerSeq STARFusion TCGA_RNA-Seq METTL13-DNM3 METTL13 chr1 171783163 + DNM3 chr1 171890888 + Exonic hg19 STAD TCGA-BR-8683-01A 2 0 3'UTR-CDS Intra-chr q24.3 q24.3 47372 ChimerSeq STARFusion TCGA_RNA-Seq PELI1-DNAJB12 PELI1 chr2 64371215 - DNAJB12 chr10 74104885 - Exonic hg19 STAD TCGA-BR-8683-01A 2 0 5'UTR-CDS Inter-chr p14 q22.1 47373 ChimerSeq STARFusion TCGA_RNA-Seq PEX7-BCLAF1 PEX7 chr6 137147607 + BCLAF1 chr6 136603825 - Exonic hg19 STAD TCGA-BR-8683-01A 2 0 CDS-5'UTR Intra-chr q23.3 q23.3 47374 ChimerSeq STARFusion TCGA_RNA-Seq PMVK-KCNN3 PMVK chr1 154904828 - KCNN3 chr1 154794660 - Exonic hg19 STAD TCGA-BR-8683-01A 2 0 In-Frame Intra-chr q21.3 q21.3 47375 ChimerSeq STARFusion TCGA_RNA-Seq THUMPD2-MAP4K3 THUMPD2 chr2 40006254 - MAP4K3 chr2 39542529 - Exonic hg19 STAD TCGA-BR-8683-01A 2 0 In-Frame Intra-chr p22.1 p22.1 47376 ChimerSeq STARFusion TCGA_RNA-Seq TMEM41A-NKTR TMEM41A chr3 185214616 - NKTR chr3 42675072 + Exonic hg19 STAD TCGA-BR-8683-01A 2 0 Out-of-frame Intra-chr q27.2 p22.1 47377 ChimerSeq STARFusion TCGA_RNA-Seq USP34-PCMTD1 USP34 chr2 61558411 - PCMTD1 chr8 52746249 - Exonic hg19 STAD TCGA-BR-8683-01A 2 0 In-Frame Inter-chr p15 q11.23 47378 ChimerSeq STARFusion TCGA_RNA-Seq VAPA-NAPG VAPA chr18 9914332 + NAPG chr18 10539759 + Exonic hg19 STAD TCGA-BR-8683-01A 2 0 Out-of-frame Intra-chr p11.22 p11.22 47379 ChimerSeq STARFusion TCGA_RNA-Seq YAP1-BIRC3 YAP1 chr11 102076805 + BIRC3 chr11 102192568 + Exonic hg19 STAD TCGA-BR-8683-01A 2 0 CDS-5'UTR Intra-chr q22.1 Tumor suppressor gene q22.2 Oncogene 47380 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-RYK ZBTB20 chr3 114412375 - RYK chr3 133914026 - Exonic hg19 STAD TCGA-BR-8683-01A 2 0 5'UTR-CDS Intra-chr q13.31 Transcription factor q22.2 TK:Ryk 47381 ChimerSeq STARFusion TCGA_RNA-Seq ZNF117-CAPZA2 ZNF117 chr7 64466919 - CAPZA2 chr7 116528181 + Exonic hg19 STAD TCGA-BR-8683-01A 2 0 5'UTR-CDS Intra-chr q11.21 Transcription factor q31.2 47382 ChimerSeq STARFusion TCGA_RNA-Seq CLMN-IGH@ CLMN chr14 95648622 - IGH@ chr14 106330057 - Exonic hg19 STAD TCGA-HU-8604-01A 59 1 Out-of-frame Intra-chr q32.13 32.33 47383 ChimerSeq STARFusion TCGA_RNA-Seq CLMN-IGHG3 CLMN chr14 95648622 - IGHG3 chr14 106330057 - Exonic hg19 STAD TCGA-HU-8604-01A 59 1 Out-of-frame Intra-chr q32.13 47384 ChimerSeq STARFusion TCGA_RNA-Seq CLMN-IGH@ CLMN chr14 95648622 - IGH@ chr14 106331650 - Exonic hg19 STAD TCGA-HU-8604-01A 53 1 Out-of-frame Intra-chr q32.13 32.33 47385 ChimerSeq STARFusion TCGA_RNA-Seq CLMN-IGHG3 CLMN chr14 95648622 - IGHG3 chr14 106331650 - Exonic hg19 STAD TCGA-HU-8604-01A 53 1 Out-of-frame Intra-chr q32.13 47386 ChimerSeq STARFusion TCGA_RNA-Seq CLMN-IGHG3 CLMN chr14 95648622 - IGHG3 chr14 106329441 - Exonic hg19 STAD TCGA-HU-8604-01A 19 1 Out-of-frame Intra-chr q32.13 47387 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-AHNAK KANSL1 chr17 44143903 - AHNAK chr11 62259303 - Exonic hg19 STAD TCGA-HU-8604-01A 12 16 In-Frame Inter-chr q12.3 Tumor suppressor gene Seq+ 47388 ChimerSeq STARFusion TCGA_RNA-Seq PAIP1-FGF10 PAIP1 chr5 43555932 - FGF10 chr5 44310632 - Exonic hg19 STAD TCGA-HU-8604-01A 12 9 Out-of-frame Intra-chr p12 p12 47389 ChimerSeq STARFusion TCGA_RNA-Seq BCL3-IGHG3 BCL3 chr19 45252216 + IGHG3 chr14 106330071 - Exonic hg19 STAD TCGA-HU-8604-01A 12 1 Out-of-frame Inter-chr q13.32 Oncogene 47390 ChimerSeq STARFusion TCGA_RNA-Seq IGHG3-FZD3 IGHG3 chr14 106235448 - FZD3 chr8 28428145 + Exonic hg19 STAD TCGA-HU-8604-01A 9 5 Out-of-frame Inter-chr p21.1 47391 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076851 + IGHG1 chr14 106209411 - Exonic hg19 STAD TCGA-HU-8604-01A 10 0 Out-of-frame Inter-chr q21.2 q32.33 47392 ChimerSeq STARFusion TCGA_RNA-Seq KANK1-KIAA2026 KANK1 chr9 677009 + KIAA2026 chr9 6091451 - Exonic hg19 STAD TCGA-HU-8604-01A 8 6 CDS-5'UTR Intra-chr p24.3 Tumor suppressor gene p24.1 47393 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1432-KDM4C KIAA1432 chr9 5757451 + KDM4C chr9 6887960 + Exonic hg19 STAD TCGA-HU-8604-01A 7 3 Out-of-frame Intra-chr p24.1 Seq+ 47394 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS2-IGHG1 ADAMTS2 chr5 178541153 - IGHG1 chr14 106331653 - Exonic hg19 STAD TCGA-HU-8604-01A 5 3 Out-of-frame Inter-chr q32.33 47395 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPC-IGHG1 HNRNPC chr14 21698512 - IGHG1 chr14 106331652 - Exonic hg19 STAD TCGA-HU-8604-01A 4 5 Out-of-frame Intra-chr q11.2 q32.33 47396 ChimerSeq STARFusion TCGA_RNA-Seq OXR1-CASC8 OXR1 chr8 107460276 + CASC8 chr8 128302305 - Exonic hg19 STAD TCGA-CG-5724-01A 92 1 Out-of-frame Intra-chr q23.1 q24.21 Seq+ 47397 ChimerSeq STARFusion TCGA_RNA-Seq OXR1-CASC8 OXR1 chr8 107460276 + CASC8 chr8 128335399 - Exonic hg19 STAD TCGA-CG-5724-01A 44 1 Out-of-frame Intra-chr q23.1 q24.21 Seq+ 47398 ChimerSeq STARFusion TCGA_RNA-Seq FER1L6-NSMCE2 FER1L6 chr8 125115550 + NSMCE2 chr8 126114559 + Exonic hg19 STAD TCGA-CG-5724-01A 4 0 CDS-5'UTR Intra-chr q24.13 q24.13 47399 ChimerSeq STARFusion TCGA_RNA-Seq ATE1-POLRMT ATE1 chr10 123687505 - POLRMT chr19 633530 - Exonic hg19 STAD TCGA-CG-5724-01A 3 0 Out-of-frame Inter-chr q26.13 p13.3 47400 ChimerSeq STARFusion TCGA_RNA-Seq CARM1-YIPF2 CARM1 chr19 11033418 + YIPF2 chr19 11033465 - Exonic hg19 STAD TCGA-CG-5724-01A 3 0 Out-of-frame Intra-chr p13.2 p13.2 47401 ChimerSeq STARFusion TCGA_RNA-Seq MDH2-ZNF428 MDH2 chr7 75696242 + ZNF428 chr19 44111965 - Exonic hg19 STAD TCGA-CG-5724-01A 3 0 Out-of-frame Inter-chr q11.23 q13.31 Transcription factor 47402 ChimerSeq STARFusion TCGA_RNA-Seq NUDT15-RBM22P2 NUDT15 chr13 48620966 + RBM22P2 chr13 31117542 - Exonic hg19 STAD TCGA-CG-5724-01A 3 0 Out-of-frame Intra-chr q14.2 q12.3 47403 ChimerSeq STARFusion TCGA_RNA-Seq PABPC1-VDAC1 PABPC1 chr8 101734128 - VDAC1 chr5 133340379 - Exonic hg19 STAD TCGA-CG-5724-01A 3 0 Out-of-frame Inter-chr q22.3 q31.1 47404 ChimerSeq STARFusion TCGA_RNA-Seq SLC35F5-TBC1D8 SLC35F5 chr2 114513947 - TBC1D8 chr2 101624735 - Exonic hg19 STAD TCGA-CG-5724-01A 3 0 Out-of-frame Intra-chr q14.1 q11.2 47405 ChimerSeq STARFusion TCGA_RNA-Seq ABCC3-CCNI ABCC3 chr17 48733369 + CCNI chr4 77976533 - Exonic hg19 STAD TCGA-CG-5724-01A 2 0 In-Frame Inter-chr q21.33 q21.1 47406 ChimerSeq STARFusion TCGA_RNA-Seq AKT1-DEDD2 AKT1 chr14 105258935 - DEDD2 chr19 42719404 - Exonic hg19 STAD TCGA-CG-5724-01A 2 0 In-Frame Inter-chr q32.33 AGC:Akt Oncogene q13.2 47407 ChimerSeq STARFusion TCGA_RNA-Seq ATP5C1-SRGAP1 ATP5C1 chr10 7830226 + SRGAP1 chr12 64377727 + Exonic hg19 STAD TCGA-CG-5724-01A 2 0 Out-of-frame Inter-chr p14 q14.2 Seq+ 47408 ChimerSeq STARFusion TCGA_RNA-Seq BFAR-PARN BFAR chr16 14749067 + PARN chr16 14698083 - Exonic hg19 STAD TCGA-CG-5724-01A 2 0 In-Frame Intra-chr 47409 ChimerSeq STARFusion TCGA_RNA-Seq C19orf48-MKI67 C19orf48 chr19 51305474 - MKI67 chr10 129917583 - Exonic hg19 STAD TCGA-CG-5724-01A 2 0 5'UTR-CDS Inter-chr q13.33 q26.2 47410 ChimerSeq STARFusion TCGA_RNA-Seq C1orf63-PBX3 C1orf63 chr1 25594231 - PBX3 chr9 128510829 + Exonic hg19 STAD TCGA-CG-5724-01A 2 0 5'UTR-5'UTR Inter-chr q33.3 Transcription factor 47411 ChimerSeq STARFusion TCGA_RNA-Seq CAT-ANXA2 CAT chr11 34460626 + ANXA2 chr15 60646412 - Exonic hg19 STAD TCGA-CG-5724-01A 2 0 In-Frame Inter-chr p13 Tumor suppressor gene q22.2 47412 ChimerSeq STARFusion TCGA_RNA-Seq CEP350-ABL2 CEP350 chr1 179956421 + ABL2 chr1 179079590 - Exonic hg19 STAD TCGA-CG-5724-01A 2 0 Out-of-frame Intra-chr q25.2 q25.2 TK:Abl Oncogene 47413 ChimerSeq STARFusion TCGA_RNA-Seq CHD8-RAC1 CHD8 chr14 21924191 - RAC1 chr7 6439757 + Exonic hg19 STAD TCGA-CG-5724-01A 2 0 5'UTR-CDS Inter-chr q11.2 p22.1 Oncogene 47414 ChimerSeq STARFusion TCGA_RNA-Seq CIB1-RRM2 CIB1 chr15 90776901 - RRM2 chr2 10267002 + Exonic hg19 STAD TCGA-CG-5724-01A 2 0 In-Frame Inter-chr q26.1 p25.1 47415 ChimerSeq STARFusion TCGA_RNA-Seq CNOT2-SRSF11 CNOT2 chr12 70672054 + SRSF11 chr1 70687298 + Exonic hg19 STAD TCGA-CG-5724-01A 2 0 5'UTR-5'UTR Inter-chr q15 p31.1 47416 ChimerSeq STARFusion TCGA_RNA-Seq CTSB-GPN3 CTSB chr8 11725510 - GPN3 chr12 110897667 - Exonic hg19 STAD TCGA-CG-5724-01A 2 0 5'UTR-CDS Inter-chr p23.1 q24.11 47417 ChimerSeq STARFusion TCGA_RNA-Seq FAM102A-HDLBP FAM102A chr9 130742271 - HDLBP chr2 242170359 - Exonic hg19 STAD TCGA-CG-5724-01A 2 0 Out-of-frame Inter-chr q34.11 q37.3 47418 ChimerSeq STARFusion TCGA_RNA-Seq FAM49B-COX7A2L FAM49B chr8 131028616 - COX7A2L chr2 42580483 - Exonic hg19 STAD TCGA-CG-5724-01A 2 0 3'UTR-CDS Inter-chr q24.21 p21 47419 ChimerSeq STARFusion TCGA_RNA-Seq FANCI-PTBP3 FANCI chr15 89787298 + PTBP3 chr9 115060196 - Exonic hg19 STAD TCGA-CG-5724-01A 2 0 5'UTR-5'UTR Inter-chr q26.1 q32 47420 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-RNFT1 FTH1 chr11 61734784 - RNFT1 chr17 58030472 - Exonic hg19 STAD TCGA-CG-5724-01A 2 0 In-Frame Inter-chr q12.3 q23.1 47421 ChimerSeq STARFusion TCGA_RNA-Seq GGACT-DOCK9 GGACT chr13 101236079 - DOCK9 chr13 99489863 - Exonic hg19 STAD TCGA-CG-5724-01A 2 0 Out-of-frame Intra-chr q32.3 q32.3 47422 ChimerSeq STARFusion TCGA_RNA-Seq HIATL2-TOM1 HIATL2 chr9 99711837 - TOM1 chr22 35723264 + Exonic hg19 STAD TCGA-CG-5724-01A 2 0 3'UTR-CDS Inter-chr q12.3 47423 ChimerSeq STARFusion TCGA_RNA-Seq HIVEP3-PRRG1 HIVEP3 chr1 42041215 - PRRG1 chrX 37312389 + Exonic hg19 STAD TCGA-CG-5724-01A 2 0 Out-of-frame Inter-chr p34.2 Tumor suppressor gene Transcription factor p21.1 47424 ChimerSeq STARFusion TCGA_RNA-Seq HMCES-PCNP HMCES chr3 128998758 + PCNP chr3 101309059 + Exonic hg19 STAD TCGA-CG-5724-01A 2 0 Out-of-frame Intra-chr q21.3 q12.3 47425 ChimerSeq STARFusion TCGA_RNA-Seq IFI27L1-HSPA14 IFI27L1 chr14 94547795 + HSPA14 chr10 14890608 + Exonic hg19 STAD TCGA-CG-5724-01A 2 0 5'UTR-CDS Inter-chr q32.12 p13 47426 ChimerSeq STARFusion TCGA_RNA-Seq IGLL5-XBP1 IGLL5 chr22 23230439 + XBP1 chr22 29195141 - Exonic hg19 STAD TCGA-CG-5724-01A 2 0 In-Frame Intra-chr q11.22 q12.1 Transcription factor 47427 ChimerSeq STARFusion TCGA_RNA-Seq IKBKE-SNX5 IKBKE chr1 206648337 + SNX5 chr20 17923839 - Exonic hg19 STAD TCGA-CG-5724-01A 2 0 In-Frame Inter-chr q32.1 Oncogene p11.23 47428 ChimerSeq STARFusion TCGA_RNA-Seq ITGB1-MYL12A ITGB1 chr10 33247073 - MYL12A chr18 3253231 + Exonic hg19 STAD TCGA-CG-5724-01A 2 0 5'UTR-5'UTR Inter-chr p11.22 Tumor suppressor gene p11.31 47429 ChimerSeq STARFusion TCGA_RNA-Seq ITGB6-SMIM8 ITGB6 chr2 161051880 - SMIM8 chr6 88046727 + Exonic hg19 STAD TCGA-CG-5724-01A 2 0 Out-of-frame Inter-chr q24.2 q15 47430 ChimerSeq STARFusion TCGA_RNA-Seq ITPR3-MICA ITPR3 chr6 33589468 + MICA chr6 31382789 + Exonic hg19 STAD TCGA-CG-5724-01A 2 0 Out-of-frame Intra-chr p21.31 p21.33 47431 ChimerSeq STARFusion TCGA_RNA-Seq MMP28-ATP6V0A1 MMP28 chr17 34122271 - ATP6V0A1 chr17 40665879 + Exonic hg19 STAD TCGA-CG-5724-01A 2 0 In-Frame Intra-chr q12 q21.2 47432 ChimerSeq STARFusion TCGA_RNA-Seq MYL6-PRR4 MYL6 chr12 56553406 + PRR4 chr12 10999734 - Exonic hg19 STAD TCGA-CG-5724-01A 2 0 In-Frame Intra-chr q13.2 47433 ChimerSeq STARFusion TCGA_RNA-Seq NDUFB6-ASAP2 NDUFB6 chr9 32558908 - ASAP2 chr2 9484661 + Exonic hg19 STAD TCGA-CG-5724-01A 2 0 In-Frame Inter-chr p21.1 p25.1 47434 ChimerSeq STARFusion TCGA_RNA-Seq OTUD4-ERGIC3 OTUD4 chr4 146080655 - ERGIC3 chr20 34135163 + Exonic hg19 STAD TCGA-CG-5724-01A 2 0 Out-of-frame Inter-chr q31.21 q11.22 47435 ChimerSeq STARFusion TCGA_RNA-Seq P4HA1-LRCH1 P4HA1 chr10 74856524 - LRCH1 chr13 47324675 + Exonic hg19 STAD TCGA-CG-5724-01A 2 0 5'UTR-CDS Inter-chr q22.1 q14.13 47436 ChimerSeq STARFusion TCGA_RNA-Seq PIK3R4-GOLGA4 PIK3R4 chr3 130463330 - GOLGA4 chr3 37396592 + Exonic hg19 STAD TCGA-CG-5724-01A 2 0 Out-of-frame Intra-chr q22.1 Other:VPS15 p22.2 47437 ChimerSeq STARFusion TCGA_RNA-Seq PPARD-UBE2D2 PPARD chr6 35314927 + UBE2D2 chr5 138979957 + Exonic hg19 STAD TCGA-CG-5724-01A 2 0 Out-of-frame Inter-chr p21.31 Transcription factor q31.2 Seq+ 47438 ChimerSeq STARFusion TCGA_RNA-Seq PRKRIR-B2M PRKRIR chr11 76091792 - B2M chr15 45007621 + Exonic hg19 STAD TCGA-CG-5724-01A 2 0 Out-of-frame Inter-chr Oncogene 47439 ChimerSeq STARFusion TCGA_RNA-Seq PROSER2-CTDP1 PROSER2 chr10 11865469 + CTDP1 chr18 77513652 + Exonic hg19 STAD TCGA-CG-5724-01A 2 0 Out-of-frame Inter-chr p14 47440 ChimerSeq STARFusion TCGA_RNA-Seq PTGES3-GNB2L1 PTGES3 chr12 57059988 - GNB2L1 chr5 180666582 - Exonic hg19 STAD TCGA-CG-5724-01A 2 0 In-Frame Inter-chr q13.3 Tumor suppressor gene 47441 ChimerSeq STARFusion TCGA_RNA-Seq PTP4A2-SUPT5H PTP4A2 chr1 32403588 - SUPT5H chr19 39966721 + Exonic hg19 STAD TCGA-CG-5724-01A 2 0 5'UTR-CDS Inter-chr p35.2 q13.2 47442 ChimerSeq STARFusion TCGA_RNA-Seq RARA-IMMP2L RARA chr17 38487648 + IMMP2L chr7 111201979 - Exonic hg19 STAD TCGA-CG-5724-01A 2 0 CDS-5'UTR Inter-chr q21.2 Oncogene Transcription factor q31.1 47443 ChimerSeq STARFusion TCGA_RNA-Seq RASAL2-SEC16B RASAL2 chr1 178063829 + SEC16B chr1 177937174 - Exonic hg19 STAD TCGA-CG-5724-01A 2 0 CDS-5'UTR Intra-chr q25.2 Tumor suppressor gene q25.2 47444 ChimerSeq STARFusion TCGA_RNA-Seq SPIN3-PKP4 SPIN3 chrX 57021156 - PKP4 chr2 159389692 + Exonic hg19 STAD TCGA-CG-5724-01A 2 0 3'UTR-5'UTR Inter-chr p11.21 q24.1 47445 ChimerSeq STARFusion TCGA_RNA-Seq STAM-TRERF1 STAM chr10 17702547 + TRERF1 chr6 42237586 - Exonic hg19 STAD TCGA-CG-5724-01A 2 0 5'UTR-5'UTR Inter-chr p12.33 p21.1 Transcription factor 47446 ChimerSeq STARFusion TCGA_RNA-Seq STIP1-RPLP0 STIP1 chr11 63960759 + RPLP0 chr12 120635265 - Exonic hg19 STAD TCGA-CG-5724-01A 2 0 In-Frame Inter-chr q13.1 q24.23 47447 ChimerSeq STARFusion TCGA_RNA-Seq TALDO1-HRAS TALDO1 chr11 747578 + HRAS chr11 534375 - Exonic hg19 STAD TCGA-CG-5724-01A 2 0 CDS-5'UTR Intra-chr p15.5 p15.5 Oncogene 47448 ChimerSeq STARFusion TCGA_RNA-Seq USH1C-PLEKHA7 USH1C chr11 17538948 - PLEKHA7 chr11 16800567 - Exonic hg19 STAD TCGA-CG-5724-01A 2 0 CDS-3'UTR Intra-chr p15.1 p15.1 47449 ChimerSeq STARFusion TCGA_RNA-Seq ZNF195-PVT1 ZNF195 chr11 3392205 - PVT1 chr8 129108764 + Exonic hg19 STAD TCGA-CG-5724-01A 2 0 CDS-5'UTR Inter-chr p15.4 Transcription factor q24.21 47450 ChimerSeq STARFusion TCGA_RNA-Seq SAMD12-COL14A1 SAMD12 chr8 119634043 - COL14A1 chr8 121209030 + Exonic hg19 STAD TCGA-CG-4301-01A 4 29 In-Frame Intra-chr q24.12 q24.12 Seq+ 47451 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-HAUS8 CEACAM5 chr19 42233234 + HAUS8 chr19 17184668 - Exonic hg19 STAD TCGA-CG-4301-01A 5 0 Out-of-frame Intra-chr q13.2 p13.11 47452 ChimerSeq STARFusion TCGA_RNA-Seq MOB1B-SLC4A4 MOB1B chr4 71768267 + SLC4A4 chr4 72352665 + Exonic hg19 STAD TCGA-CG-4301-01A 3 3 Out-of-frame Intra-chr q13.3 Tumor suppressor gene q13.3 47453 ChimerSeq STARFusion TCGA_RNA-Seq ROCK1-LAMA3 ROCK1 chr18 18546878 - LAMA3 chr18 21393021 + Exonic hg19 STAD TCGA-CG-4301-01A 2 2 In-Frame Intra-chr q11.1 AGC:DMPK q11.2 Seq+ 47454 ChimerSeq STARFusion TCGA_RNA-Seq SNX33P1-IGH@ SNX33P1 chr19 16147332 - IGH@ chr14 106237742 - Exonic hg19 STAD TCGA-BR-7196-01A 38 0 Out-of-frame Inter-chr p13.12 32.33 47455 ChimerSeq STARFusion TCGA_RNA-Seq SNX33P1-IGHG3 SNX33P1 chr19 16147332 - IGHG3 chr14 106237742 - Exonic hg19 STAD TCGA-BR-7196-01A 38 0 Out-of-frame Inter-chr p13.12 47456 ChimerSeq STARFusion TCGA_RNA-Seq SNX33P1-IGH@ SNX33P1 chr19 16147330 - IGH@ chr14 106111124 - Exonic hg19 STAD TCGA-BR-7196-01A 26 0 Out-of-frame Inter-chr p13.12 32.33 47457 ChimerSeq STARFusion TCGA_RNA-Seq SNX33P1-IGH@ SNX33P1 chr19 16147332 - IGH@ chr14 106092402 - Exonic hg19 STAD TCGA-BR-7196-01A 19 0 Out-of-frame Inter-chr p13.12 32.33 47458 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-MYH11 IGH@ chr14 106494134 - MYH11 chr16 15841450 - Exonic hg19 STAD TCGA-BR-7196-01A 14 1 Out-of-frame Inter-chr 32.33 Oncogene 47459 ChimerSeq STARFusion TCGA_RNA-Seq PROM1-FAM3D PROM1 chr4 16040569 - FAM3D chr3 58641328 - Exonic hg19 STAD TCGA-BR-7196-01A 10 1 CDS-5'UTR Inter-chr p15.32 p14.2 47460 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-UBE3C IGL@ chr22 22453415 + UBE3C chr7 157009802 + Exonic hg19 STAD TCGA-BR-8381-01A 9 4 Out-of-frame Inter-chr q11.22 q36.3 47461 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1522-IGHG1 KIAA1522 chr1 33235767 + IGHG1 chr14 106331652 - Exonic hg19 STAD TCGA-BR-8381-01A 9 2 Out-of-frame Inter-chr p35.1 q32.33 47462 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076851 + IGHG1 chr14 106209411 - Exonic hg19 STAD TCGA-BR-8381-01A 9 0 Out-of-frame Inter-chr q21.2 q32.33 47463 ChimerSeq STARFusion TCGA_RNA-Seq GNB2L1-IGHG1 GNB2L1 chr5 180666510 - IGHG1 chr14 106209410 - Exonic hg19 STAD TCGA-BR-8381-01A 3 7 Out-of-frame Inter-chr Tumor suppressor gene q32.33 47464 ChimerSeq STARFusion TCGA_RNA-Seq SCYL3-KIFAP3 SCYL3 chr1 169857817 - KIFAP3 chr1 169985765 - Exonic hg19 STAD TCGA-BR-8297-01A 24 19 In-Frame Intra-chr q24.2 Other:SCY1 q24.2 Seq+ 47465 ChimerSeq STARFusion TCGA_RNA-Seq STK24-DOCK9 STK24 chr13 99228999 - DOCK9 chr13 99449507 - Exonic hg19 STAD TCGA-BR-8297-01A 16 6 Out-of-frame Intra-chr q32.2 q32.3 Seq+ 47466 ChimerSeq STARFusion TCGA_RNA-Seq LAMA3-NDUFS8 LAMA3 chr18 21364121 + NDUFS8 chr11 67800390 + Exonic hg19 STAD TCGA-BR-8297-01A 13 7 In-Frame Inter-chr q11.2 q13.2 Seq+ 47467 ChimerSeq STARFusion TCGA_RNA-Seq ELL-LRRC25 ELL chr19 18632731 - LRRC25 chr19 18502935 - Exonic hg19 STAD TCGA-BR-8297-01A 13 2 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 47468 ChimerSeq STARFusion TCGA_RNA-Seq REREP1Y-OFD1P8Y REREP1Y chrY 25608682 + OFD1P8Y chrY 24123559 + Exonic hg19 STAD TCGA-BR-8297-01A 12 2 Out-of-frame Intra-chr q11.223 q11.223 47469 ChimerSeq STARFusion TCGA_RNA-Seq CLDN18-ARHGAP26 CLDN18 chr3 137749947 + ARHGAP26 chr5 142393645 + Exonic hg19 STAD TCGA-BR-8367-01A 20 10 In-Frame Inter-chr q22.3 q31.3 KB Pub Seq+ 47470 ChimerSeq STARFusion TCGA_RNA-Seq ADCY10P1-APOBEC2 ADCY10P1 chr6 41105299 + APOBEC2 chr6 41029067 + Exonic hg19 STAD TCGA-VQ-AA6F-01A 21 8 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 47471 ChimerSeq STARFusion TCGA_RNA-Seq DPYD-MIR137HG DPYD chr1 98348820 - MIR137HG chr1 98455125 - Exonic hg19 STAD TCGA-VQ-AA6F-01A 13 3 CDS-3'UTR Intra-chr p21.3 Oncogene p21.3 47472 ChimerSeq STARFusion TCGA_RNA-Seq TMEM132C-IGL@ TMEM132C chr12 129180652 + IGL@ chr22 23241801 + Exonic hg19 STAD TCGA-F1-6874-01A 113 0 Out-of-frame Inter-chr q24.32 q11.22 47473 ChimerSeq STARFusion TCGA_RNA-Seq TMEM132C-IGLJ2 TMEM132C chr12 129180652 + IGLJ2 chr22 23241801 + Exonic hg19 STAD TCGA-F1-6874-01A 113 0 Out-of-frame Inter-chr q24.32 q11.22 47474 ChimerSeq STARFusion TCGA_RNA-Seq TMEM132C-IGLC2 TMEM132C chr12 129180652 + IGLC2 chr22 23241801 + Exonic hg19 STAD TCGA-F1-6874-01A 112 0 Out-of-frame Inter-chr q24.32 q11.22 47475 ChimerSeq STARFusion TCGA_RNA-Seq NBR1-LINC00854 NBR1 chr17 41332834 + LINC00854 chr17 41376572 - Exonic hg19 STAD TCGA-F1-6874-01A 26 0 Out-of-frame Intra-chr q21.31 q21.31 47476 ChimerSeq STARFusion TCGA_RNA-Seq RAB20-MYO16 RAB20 chr13 111213695 - MYO16 chr13 109610036 + Exonic hg19 STAD TCGA-D7-6518-01A 28 1 Out-of-frame Intra-chr q34 Seq+ 47477 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-MGP IGH@ chr14 107169929 - MGP chr12 15037044 - Exonic hg19 STAD TCGA-D7-6518-01A 19 0 Out-of-frame Inter-chr 32.33 p12.3 47478 ChimerSeq STARFusion TCGA_RNA-Seq CDH4-GNAS CDH4 chr20 59829993 + GNAS chr20 57470667 + Exonic hg19 STAD TCGA-BR-8687-01A 36 31 In-Frame Intra-chr q13.33 Tumor suppressor gene q13.32 Oncogene Seq+ 47479 ChimerSeq STARFusion TCGA_RNA-Seq PPM1B-IQCA1 PPM1B chr2 44396413 + IQCA1 chr2 237406130 - Exonic hg19 STAD TCGA-BR-8687-01A 25 13 5'UTR-CDS Intra-chr p21 q37.3 Seq+ 47480 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142481912 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-BR-8687-01A 21 0 3'UTR-CDS Inter-chr q13.41 47481 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142460418 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-BR-8687-01A 21 0 In-Frame Inter-chr q13.41 47482 ChimerSeq STARFusion TCGA_RNA-Seq PPM1B-ABCG8 PPM1B chr2 44396413 + ABCG8 chr2 44102285 + Exonic hg19 STAD TCGA-BR-8687-01A 18 9 5'UTR-CDS Intra-chr p21 p21 Seq+ 47483 ChimerSeq STARFusion TCGA_RNA-Seq MYL6-GNAS MYL6 chr12 56553406 + GNAS chr20 57470667 + Exonic hg19 STAD TCGA-BR-8687-01A 3 38 In-Frame Inter-chr q13.2 q13.32 Oncogene 47484 ChimerSeq STARFusion TCGA_RNA-Seq METTL21B-GLCE METTL21B chr12 58166911 + GLCE chr15 69488754 + Exonic hg19 STAD TCGA-BR-8687-01A 12 0 CDS-5'UTR Inter-chr q23 47485 ChimerSeq STARFusion TCGA_RNA-Seq VAPB-GNAS VAPB chr20 56964573 + GNAS chr20 57470667 + Exonic hg19 STAD TCGA-BR-8687-01A 8 13 In-Frame Intra-chr q13.32 q13.32 Oncogene Seq+ 47486 ChimerSeq STARFusion TCGA_RNA-Seq CHKA-CCNB3 CHKA chr11 67888295 - CCNB3 chrX 50027542 + Exonic hg19 STAD TCGA-BR-8687-01A 8 5 CDS-5'UTR Inter-chr q13.2 p11.22 Seq+ 47487 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL2-GNAS OSBPL2 chr20 60813653 + GNAS chr20 57470667 + Exonic hg19 STAD TCGA-BR-8687-01A 4 16 5'UTR-5'UTR Intra-chr q13.33 q13.32 Oncogene 47488 ChimerSeq STARFusion TCGA_RNA-Seq PPM1B-ABCG8 PPM1B chr2 44396413 + ABCG8 chr2 44102270 + Exonic hg19 STAD TCGA-BR-8687-01A 5 9 5'UTR-CDS Intra-chr p21 p21 Seq+ 47489 ChimerSeq STARFusion TCGA_RNA-Seq MYL6B-GNAS MYL6B chr12 56553406 + GNAS chr20 57470667 + Exonic hg19 STAD TCGA-BR-8687-01A 3 15 3'UTR-3'UTR Inter-chr q13.2 q13.32 Oncogene 47490 ChimerSeq STARFusion TCGA_RNA-Seq KMT2C-GALNTL5 KMT2C chr7 152055672 - GALNTL5 chr7 151716731 + Exonic hg19 STAD TCGA-BR-4363-01A 2 0 Out-of-frame Intra-chr q36.1 Oncogene Tumor suppressor gene q36.1 Seq+ 47491 ChimerSeq STARFusion TCGA_RNA-Seq ZNF430-SEC31A ZNF430 chr19 21205687 + SEC31A chr4 83752128 - Exonic hg19 STAD TCGA-BR-4363-01A 2 0 Out-of-frame Inter-chr Transcription factor q21.22 47492 ChimerSeq STARFusion TCGA_RNA-Seq COL1A2-IGH@ COL1A2 chr7 94058837 + IGH@ chr14 106330070 - Exonic hg19 STAD TCGA-FP-7998-01A 19 1 Out-of-frame Inter-chr q21.3 32.33 47493 ChimerSeq STARFusion TCGA_RNA-Seq TRDV1-TRAJ40 TRDV1 chr14 22564895 + TRAJ40 chr14 22968670 + Exonic hg19 STAD TCGA-FP-7998-01A 18 4 Out-of-frame Intra-chr q11.2 q11.2 47494 ChimerSeq STARFusion TCGA_RNA-Seq SMOC2-IGH@ SMOC2 chr6 168910661 + IGH@ chr14 106330845 - Exonic hg19 STAD TCGA-FP-7998-01A 17 1 Out-of-frame Inter-chr q27 32.33 47495 ChimerSeq STARFusion TCGA_RNA-Seq USP20-LINC00963 USP20 chr9 132597778 + LINC00963 chr9 132265602 + Exonic hg19 STAD TCGA-FP-7998-01A 16 0 Out-of-frame Intra-chr q34.11 q34.11 47496 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076852 + IGH@ chr14 106209410 - Exonic hg19 STAD TCGA-FP-7998-01A 13 0 Out-of-frame Inter-chr q21.2 32.33 47497 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076852 + IGHG1 chr14 106209410 - Exonic hg19 STAD TCGA-FP-7998-01A 13 0 Out-of-frame Inter-chr q21.2 q32.33 47498 ChimerSeq STARFusion TCGA_RNA-Seq GABRP-RANBP17 GABRP chr5 170216251 + RANBP17 chr5 170380601 + Exonic hg19 STAD TCGA-D7-A4YY-01A 350 110 In-Frame Intra-chr q35.1 q35.1 Seq+ 47499 ChimerSeq STARFusion TCGA_RNA-Seq ITGA6-RAPGEF4 ITGA6 chr2 173356251 + RAPGEF4 chr2 173898642 + Exonic hg19 STAD TCGA-D7-A4YY-01A 317 153 In-Frame Intra-chr q31.1 q31.1 Seq+ 47500 ChimerSeq STARFusion TCGA_RNA-Seq AP1M2-FBXL12 AP1M2 chr19 10689568 - FBXL12 chr19 9922393 - Exonic hg19 STAD TCGA-D7-A4YY-01A 65 30 In-Frame Intra-chr p13.2 p13.2 Seq+ 47501 ChimerSeq STARFusion TCGA_RNA-Seq BAIAP2-RPTOR BAIAP2 chr17 79031767 + RPTOR chr17 78882611 + Exonic hg19 STAD TCGA-D7-A4YY-01A 35 18 In-Frame Intra-chr q25.3 q25.3 Seq+ 47502 ChimerSeq STARFusion TCGA_RNA-Seq DENND5B-FAM60A DENND5B chr12 31743640 - FAM60A chr12 31451158 - Exonic hg19 STAD TCGA-D7-A4YY-01A 27 6 CDS-5'UTR Intra-chr p11.21 Seq+ 47503 ChimerSeq STARFusion TCGA_RNA-Seq XRCC6-SREBF2 XRCC6 chr22 42033795 + SREBF2 chr22 42262835 + Exonic hg19 STAD TCGA-D7-A4YY-01A 23 8 Out-of-frame Intra-chr q13.2 q13.2 Transcription factor Seq+ 47504 ChimerSeq STARFusion TCGA_RNA-Seq PRIM2-COL22A1 PRIM2 chr6 57190843 + COL22A1 chr8 139749820 - Exonic hg19 STAD TCGA-D7-A4YY-01A 20 10 In-Frame Inter-chr p11.2 q24.3 Seq+ 47505 ChimerSeq STARFusion TCGA_RNA-Seq ZNF148-OSBPL11 ZNF148 chr3 125093946 - OSBPL11 chr3 125271523 - Exonic hg19 STAD TCGA-D7-A4YY-01A 11 4 5'UTR-CDS Intra-chr q21.2 Transcription factor q21.2 Seq+ 47506 ChimerSeq STARFusion TCGA_RNA-Seq SUZ12-RHOT1 SUZ12 chr17 30300250 + RHOT1 chr17 30568814 + Exonic hg19 STAD TCGA-D7-A4YY-01A 7 7 CDS-3'UTR Intra-chr q11.2 Tumor suppressor gene q11.2 47507 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD52-ASPHD1 ANKRD52 chr12 56649568 - ASPHD1 chr16 29917109 + Exonic hg19 STAD TCGA-MX-A666-01A 77 24 Out-of-frame Inter-chr q13.3 p11.2 Seq+ 47508 ChimerSeq STARFusion TCGA_RNA-Seq GAS7-MYH1 GAS7 chr17 10101525 - MYH1 chr17 10415863 - Exonic hg19 STAD TCGA-MX-A666-01A 55 9 In-Frame Intra-chr p13.1 p13.1 Seq+ 47509 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H3-MROH6 ZC3H3 chr8 144618427 - MROH6 chr8 144650058 - Exonic hg19 STAD TCGA-MX-A666-01A 36 16 Out-of-frame Intra-chr 47510 ChimerSeq STARFusion TCGA_RNA-Seq PDCD2L-CACNA1A PDCD2L chr19 34904752 + CACNA1A chr19 13482593 - Exonic hg19 STAD TCGA-MX-A666-01A 35 12 In-Frame Intra-chr q13.11 p13.13 Seq+ 47511 ChimerSeq STARFusion TCGA_RNA-Seq EIF2S2-HORMAD2 EIF2S2 chr20 32691268 - HORMAD2 chr22 30514969 + Exonic hg19 STAD TCGA-MX-A666-01A 23 9 In-Frame Inter-chr q11.22 q12.2 47512 ChimerSeq STARFusion TCGA_RNA-Seq PEPD-NDUFB7 PEPD chr19 33892627 - NDUFB7 chr19 14677745 - Exonic hg19 STAD TCGA-MX-A666-01A 19 5 In-Frame Intra-chr q13.11 p13.12 Seq+ 47513 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD52-ASPHD1 ANKRD52 chr12 56650799 - ASPHD1 chr16 29917109 + Exonic hg19 STAD TCGA-MX-A666-01A 11 24 Out-of-frame Inter-chr q13.3 p11.2 Seq+ 47514 ChimerSeq STARFusion TCGA_RNA-Seq NUMB-HEATR4 NUMB chr14 73925199 - HEATR4 chr14 73963383 - Exonic hg19 STAD TCGA-MX-A666-01A 15 2 5'UTR-CDS Intra-chr q24.3 Tumor suppressor gene q24.3 Seq+ 47515 ChimerSeq STARFusion TCGA_RNA-Seq GLS-MFSD6 GLS chr2 191819544 + MFSD6 chr2 191364741 + Exonic hg19 STAD TCGA-MX-A666-01A 13 2 Out-of-frame Intra-chr q32.2 Tumor suppressor gene q32.2 47516 ChimerSeq STARFusion TCGA_RNA-Seq CDK5RAP1-EPS15L1 CDK5RAP1 chr20 31973456 - EPS15L1 chr19 16466662 - Exonic hg19 STAD TCGA-MX-A666-01A 12 4 In-Frame Inter-chr q11.21 p13.11 Seq+ 47517 ChimerSeq STARFusion TCGA_RNA-Seq CMSS1-LNP1 CMSS1 chr3 99865905 + LNP1 chr3 100170563 + Exonic hg19 STAD TCGA-MX-A666-01A 12 3 Out-of-frame Intra-chr q12.1 q12.2 Seq+ 47518 ChimerSeq STARFusion TCGA_RNA-Seq ITGAV-FAM171B ITGAV chr2 187466878 + FAM171B chr2 187604955 + Exonic hg19 STAD TCGA-MX-A666-01A 11 2 In-Frame Intra-chr q32.1 Tumor suppressor gene q32.1 47519 ChimerSeq STARFusion TCGA_RNA-Seq COASY-IGHA1 COASY chr17 40714610 + IGHA1 chr14 106175002 - Exonic hg19 STAD TCGA-MX-A666-01A 11 1 Out-of-frame Inter-chr q21.2 47520 ChimerSeq STARFusion TCGA_RNA-Seq EIF2S2-HORMAD2 EIF2S2 chr20 32691268 - HORMAD2 chr22 30507785 + Exonic hg19 STAD TCGA-MX-A666-01A 8 9 In-Frame Inter-chr q11.22 q12.2 47521 ChimerSeq STARFusion TCGA_RNA-Seq KCNQ1OT1-PSMA1 KCNQ1OT1 chr11 2720558 - PSMA1 chr11 14632697 - Exonic hg19 STAD TCGA-MX-A666-01A 9 2 3'UTR-5'UTR Intra-chr p15.5 p15.2 Seq+ 47522 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-PIPOX TAOK1 chr17 27838010 + PIPOX chr17 27371877 + Exonic hg19 STAD TCGA-MX-A666-01A 9 2 In-Frame Intra-chr q11.2 q11.2 Seq+ 47523 ChimerSeq STARFusion TCGA_RNA-Seq PDCD2L-CACNA1A PDCD2L chr19 34904752 + CACNA1A chr19 13483544 - Exonic hg19 STAD TCGA-MX-A666-01A 5 12 Out-of-frame Intra-chr q13.11 p13.13 Seq+ 47524 ChimerSeq STARFusion TCGA_RNA-Seq DDX52-IKZF3 DDX52 chr17 35985941 - IKZF3 chr17 37922746 - Exonic hg19 STAD TCGA-BR-A4J4-01A 1089 295 Out-of-frame Intra-chr q12 q21.1 Tumor suppressor gene Transcription factor Seq+ 47525 ChimerSeq STARFusion TCGA_RNA-Seq DDX52-IKZF3 DDX52 chr17 35986834 - IKZF3 chr17 37922746 - Exonic hg19 STAD TCGA-BR-A4J4-01A 181 293 Out-of-frame Intra-chr q12 q21.1 Tumor suppressor gene Transcription factor Seq+ 47526 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL5-TRPM5 OSBPL5 chr11 3125423 - TRPM5 chr11 2427321 - Exonic hg19 STAD TCGA-BR-A4J4-01A 11 3 In-Frame Intra-chr p15.4 p15.5 Seq+ 47527 ChimerSeq STARFusion TCGA_RNA-Seq CDC42EP4-AMZ2 CDC42EP4 chr17 71308032 - AMZ2 chr17 66244781 + Exonic hg19 STAD TCGA-D7-6820-01A 222 20 5'UTR-5'UTR Intra-chr q25.1 q24.2 Seq+ 47528 ChimerSeq STARFusion TCGA_RNA-Seq CDC42EP4-AMZ2 CDC42EP4 chr17 71308032 - AMZ2 chr17 66246329 + Exonic hg19 STAD TCGA-D7-6820-01A 38 20 5'UTR-5'UTR Intra-chr q25.1 q24.2 Seq+ 47529 ChimerSeq STARFusion TCGA_RNA-Seq ARSG-LINC00511 ARSG chr17 66287709 + LINC00511 chr17 70427365 - Exonic hg19 STAD TCGA-D7-6820-01A 26 4 Out-of-frame Intra-chr q24.2 q24.3 47530 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL3-IFI6 RN7SL3 chr14 50320402 - IFI6 chr1 27992765 - Exonic hg19 STAD TCGA-D7-6820-01A 23 1 Out-of-frame Inter-chr q21.3 p35.3 47531 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL2-IFI6 RN7SL2 chr14 50329330 - IFI6 chr1 27992758 - Exonic hg19 STAD TCGA-D7-6820-01A 22 2 Out-of-frame Inter-chr q21.3 p35.3 47532 ChimerSeq STARFusion TCGA_RNA-Seq ARSG-LINC00511 ARSG chr17 66287709 + LINC00511 chr17 70466468 - Exonic hg19 STAD TCGA-D7-6820-01A 8 4 Out-of-frame Intra-chr q24.2 q24.3 47533 ChimerSeq STARFusion TCGA_RNA-Seq AMZ2-SLC16A6 AMZ2 chr17 66247319 + SLC16A6 chr17 66274468 - Exonic hg19 STAD TCGA-D7-6820-01A 7 0 CDS-5'UTR Intra-chr q24.2 q24.2 Seq+ 47534 ChimerSeq STARFusion TCGA_RNA-Seq PIGR-PI3 PIGR chr1 207102081 - PI3 chr20 43803543 + Exonic hg19 STAD TCGA-D7-6820-01A 5 2 Out-of-frame Inter-chr q32.1 q13.12 47535 ChimerSeq STARFusion TCGA_RNA-Seq PGC-PSCA PGC chr6 41704715 - PSCA chr8 143761915 + Exonic hg19 STAD TCGA-D7-6820-01A 4 4 Out-of-frame Inter-chr p21.1 q24.3 47536 ChimerSeq STARFusion TCGA_RNA-Seq PIGR-PI3 PIGR chr1 207102074 - PI3 chr20 43803550 + Exonic hg19 STAD TCGA-D7-6820-01A 3 2 Out-of-frame Inter-chr q32.1 q13.12 47537 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL3-IFI6 RN7SL3 chr14 50320395 - IFI6 chr1 27992758 - Exonic hg19 STAD TCGA-D7-6820-01A 3 1 Out-of-frame Inter-chr q21.3 p35.3 47538 ChimerSeq STARFusion TCGA_RNA-Seq AGAP3-HOXD11 AGAP3 chr7 150783901 + HOXD11 chr2 176972316 + Exonic hg19 STAD TCGA-D7-6820-01A 3 0 Out-of-frame Inter-chr q36.1 q31.1 Transcription factor 47539 ChimerSeq STARFusion TCGA_RNA-Seq HSPBP1-GRK5 HSPBP1 chr19 55790902 - GRK5 chr10 120967223 + Exonic hg19 STAD TCGA-D7-6820-01A 3 0 Out-of-frame Inter-chr q13.42 q26.11 47540 ChimerSeq STARFusion TCGA_RNA-Seq ARRDC1-EHMT1 ARRDC1 chr9 140500287 + EHMT1 chr9 140605419 + Exonic hg19 STAD TCGA-D7-6820-01A 2 0 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 47541 ChimerSeq STARFusion TCGA_RNA-Seq C1orf109-SEC61A1 C1orf109 chr1 38156006 - SEC61A1 chr3 127785797 + Exonic hg19 STAD TCGA-D7-6820-01A 2 0 5'UTR-CDS Inter-chr p34.3 q21.3 47542 ChimerSeq STARFusion TCGA_RNA-Seq CTNNA1-MATR3 CTNNA1 chr5 138163407 + MATR3 chr5 138650364 + Exonic hg19 STAD TCGA-D7-6820-01A 2 0 In-Frame Intra-chr q31.2 Oncogene q31.2 47543 ChimerSeq STARFusion TCGA_RNA-Seq DGUOK-ASB3 DGUOK chr2 74154179 + ASB3 chr2 53978078 - Exonic hg19 STAD TCGA-D7-6820-01A 2 0 In-Frame Intra-chr p13.1 p16.2 47544 ChimerSeq STARFusion TCGA_RNA-Seq LGMN-DGCR8 LGMN chr14 93180168 - DGCR8 chr22 20077499 + Exonic hg19 STAD TCGA-D7-6820-01A 2 0 In-Frame Inter-chr q32.12 q11.21 47545 ChimerSeq STARFusion TCGA_RNA-Seq LINC00511-FZD3 LINC00511 chr17 70588342 - FZD3 chr8 28360187 + Exonic hg19 STAD TCGA-D7-6820-01A 2 0 3'UTR-5'UTR Inter-chr q24.3 p21.1 47546 ChimerSeq STARFusion TCGA_RNA-Seq NCOA2-CASC17 NCOA2 chr8 71082437 - CASC17 chr17 69181796 - Exonic hg19 STAD TCGA-D7-6820-01A 2 0 Out-of-frame Inter-chr q13.3 Oncogene Transcription factor q24.3 47547 ChimerSeq STARFusion TCGA_RNA-Seq SUPT16H-HNRNPC SUPT16H chr14 21852021 - HNRNPC chr14 21702388 - Exonic hg19 STAD TCGA-D7-6820-01A 2 0 CDS-5'UTR Intra-chr q11.2 q11.2 47548 ChimerSeq STARFusion TCGA_RNA-Seq TMEM33-SLAIN2 TMEM33 chr4 41937546 + SLAIN2 chr4 48371866 + Exonic hg19 STAD TCGA-D7-6820-01A 2 0 Out-of-frame Intra-chr p13 p11 47549 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 124979693 - SCARB1 chr12 125302253 - Exonic hg19 STAD TCGA-VQ-A91Y-01A 164 17 In-Frame Intra-chr q24.31 q24.31 Seq+ 47550 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-ANO1 PPFIA1 chr11 70118542 + ANO1 chr11 70016993 + Exonic hg19 STAD TCGA-VQ-A91Y-01A 33 5 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 47551 ChimerSeq STARFusion TCGA_RNA-Seq DUSP12-PHACTR4 DUSP12 chr1 161719879 + PHACTR4 chr1 28826217 + Exonic hg19 STAD TCGA-VQ-A91Y-01A 14 2 Out-of-frame Intra-chr q23.3 p35.3 Tumor suppressor gene 47552 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A44-SEMA4A SLC25A44 chr1 156170263 + SEMA4A chr1 156142617 + Exonic hg19 STAD TCGA-VQ-A91Y-01A 14 2 Out-of-frame Intra-chr q22 q22 Seq+ 47553 ChimerSeq STARFusion TCGA_RNA-Seq AP3B1-CAMLG AP3B1 chr5 77511879 - CAMLG chr5 134086449 + Exonic hg19 STAD TCGA-VQ-AA6J-01A 149 58 In-Frame Intra-chr q14.1 q31.1 Seq+ 47554 ChimerSeq STARFusion TCGA_RNA-Seq XKR6-HOOK3 XKR6 chr8 11058085 - HOOK3 chr8 42821616 + Exonic hg19 STAD TCGA-VQ-AA6J-01A 33 9 In-Frame Intra-chr p23.1 p11.21 Oncogene Seq+ 47555 ChimerSeq STARFusion TCGA_RNA-Seq CLCN5-PAGE1 CLCN5 chrX 49689924 + PAGE1 chrX 49455977 - Exonic hg19 STAD TCGA-VQ-AA6J-01A 31 12 In-Frame Intra-chr p11.23 p11.23 Seq+ 47556 ChimerSeq STARFusion TCGA_RNA-Seq TRPM4-PPFIA3 TRPM4 chr19 49675365 + PPFIA3 chr19 49636258 + Exonic hg19 STAD TCGA-VQ-AA6J-01A 20 1 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 47557 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-CD99 WIPF2 chr17 38375744 + CD99 chrY 2591355 + Exonic hg19 STAD TCGA-RD-A7BT-01A 1830 682 5'UTR-CDS Inter-chr q21.2 p22.33 Seq+ 47558 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-CD99 WIPF2 chr17 38375744 + CD99 chrX 2641355 + Exonic hg19 STAD TCGA-RD-A7BT-01A 913 339 5'UTR-3'UTR Inter-chr q21.2 p22.33 Seq+ 47559 ChimerSeq STARFusion TCGA_RNA-Seq RARA-LYRM9 RARA chr17 38487648 + LYRM9 chr17 26209738 - Exonic hg19 STAD TCGA-RD-A7BT-01A 421 292 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q11.2 47560 ChimerSeq STARFusion TCGA_RNA-Seq RARA-LYRM9 RARA chr17 38487648 + LYRM9 chr17 26207392 - Exonic hg19 STAD TCGA-RD-A7BT-01A 276 292 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q11.2 47561 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-CDK12 WIPF2 chr17 38375744 + CDK12 chr17 37712539 + Exonic hg19 STAD TCGA-RD-A7BT-01A 183 54 5'UTR-3'UTR Intra-chr q21.2 q12 Oncogene Seq+ 47562 ChimerSeq STARFusion TCGA_RNA-Seq CDK12-SUZ12P CDK12 chr17 37712666 + SUZ12P chr17 29070319 + Exonic hg19 STAD TCGA-RD-A7BT-01A 134 60 Out-of-frame Intra-chr q12 Oncogene 47563 ChimerSeq STARFusion TCGA_RNA-Seq RARA-LYRM9 RARA chr17 38499119 + LYRM9 chr17 26209738 - Exonic hg19 STAD TCGA-RD-A7BT-01A 46 292 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q11.2 47564 ChimerSeq STARFusion TCGA_RNA-Seq JUP-FKBP10 JUP chr17 39927899 - FKBP10 chr17 39976521 + Exonic hg19 STAD TCGA-RD-A7BT-01A 99 45 In-Frame Intra-chr q21.2 Tumor suppressor gene q21.2 Seq+ 47565 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-SUZ12P WIPF2 chr17 38375744 + SUZ12P chr17 29070319 + Exonic hg19 STAD TCGA-RD-A7BT-01A 61 39 Out-of-frame Intra-chr q21.2 47566 ChimerSeq STARFusion TCGA_RNA-Seq LYRM9-LEPREL4 LYRM9 chr17 26207300 - LEPREL4 chr17 39967536 - Exonic hg19 STAD TCGA-RD-A7BT-01A 54 25 Out-of-frame Intra-chr q11.2 47567 ChimerSeq STARFusion TCGA_RNA-Seq CDK12-SUZ12P CDK12 chr17 37712666 + SUZ12P chr17 29086509 + Exonic hg19 STAD TCGA-RD-A7BT-01A 42 60 Out-of-frame Intra-chr q12 Oncogene 47568 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-SUZ12P WIPF2 chr17 38375744 + SUZ12P chr17 29086509 + Exonic hg19 STAD TCGA-RD-A7BT-01A 47 32 Out-of-frame Intra-chr q21.2 47569 ChimerSeq STARFusion TCGA_RNA-Seq CDK12-SUZ12P CDK12 chr17 37713311 + SUZ12P chr17 29070319 + Exonic hg19 STAD TCGA-RD-A7BT-01A 30 42 Out-of-frame Intra-chr q12 Oncogene 47570 ChimerSeq STARFusion TCGA_RNA-Seq BAIAP2L1-GTF2IRD2 BAIAP2L1 chr7 98030114 - GTF2IRD2 chr7 74227349 - Exonic hg19 STAD TCGA-RD-A7BT-01A 30 8 Out-of-frame Intra-chr q22.1 q11.23 Transcription factor 47571 ChimerSeq STARFusion TCGA_RNA-Seq PCSK5-DDX58 PCSK5 chr9 78682959 + DDX58 chr9 32500937 - Exonic hg19 STAD TCGA-RD-A7BT-01A 22 3 In-Frame Intra-chr q21.13 p21.1 Tumor suppressor gene Seq+ 47572 ChimerSeq STARFusion TCGA_RNA-Seq BRAF-DPP6 BRAF chr7 140624366 - DPP6 chr7 154143299 + Exonic hg19 STAD TCGA-RD-A7BT-01A 19 3 In-Frame Intra-chr q34 TKL:RAF Oncogene 47573 ChimerSeq STARFusion TCGA_RNA-Seq LYRM9-HAP1 LYRM9 chr17 26207300 - HAP1 chr17 39884583 - Exonic hg19 STAD TCGA-RD-A7BT-01A 18 6 Out-of-frame Intra-chr q11.2 q21.2 47574 ChimerSeq STARFusion TCGA_RNA-Seq LYRM9-LEPREL4 LYRM9 chr17 26207300 - LEPREL4 chr17 39963131 - Exonic hg19 STAD TCGA-RD-A7BT-01A 13 25 Out-of-frame Intra-chr q11.2 47575 ChimerSeq STARFusion TCGA_RNA-Seq LYRM9-LEPREL4 LYRM9 chr17 26207147 - LEPREL4 chr17 39967536 - Exonic hg19 STAD TCGA-RD-A7BT-01A 8 25 Out-of-frame Intra-chr q11.2 47576 ChimerSeq STARFusion TCGA_RNA-Seq RPS4Y1-DHRSX RPS4Y1 chrY 2713784 + DHRSX chrY 2260515 - Exonic hg19 STAD TCGA-RD-A7BT-01A 12 1 5'UTR-CDS Intra-chr p11.2 p22.33 47577 ChimerSeq STARFusion TCGA_RNA-Seq YEATS2-LINC01014 YEATS2 chr3 183454617 + LINC01014 chr3 178174402 + Exonic hg19 STAD TCGA-RD-A7BT-01A 11 5 Out-of-frame Intra-chr q27.1 q26.32 47578 ChimerSeq STARFusion TCGA_RNA-Seq C9orf85-FAM205A C9orf85 chr9 74526752 + FAM205A chr9 34728079 - Exonic hg19 STAD TCGA-RD-A7BT-01A 8 4 Out-of-frame Intra-chr q21.13 p13.3 47579 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-PPP1R1B ERBB2 chr17 37886516 + PPP1R1B chr17 37783559 + Exonic hg19 STAD TCGA-RD-A7BT-01A 7 5 Out-of-frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 47580 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-FKBP10 ERBB2 chr17 37856564 + FKBP10 chr17 39974341 + Exonic hg19 STAD TCGA-RD-A7BT-01A 4 8 In-Frame Intra-chr q12 Oncogene q21.2 47581 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-FKBP10 ERBB2 chr17 37866734 + FKBP10 chr17 39977906 + Exonic hg19 STAD TCGA-RD-A7BT-01A 4 8 In-Frame Intra-chr q12 Oncogene q21.2 47582 ChimerSeq STARFusion TCGA_RNA-Seq SULF2-DEXI SULF2 chr20 46414087 - DEXI chr16 11023416 - Exonic hg19 STAD TCGA-RD-A8MW-01A 121 22 5'UTR-3'UTR Inter-chr q13.12 p13.13 Seq+ 47583 ChimerSeq STARFusion TCGA_RNA-Seq ZFP64-CSE1L ZFP64 chr20 50808130 - CSE1L chr20 47700563 + Exonic hg19 STAD TCGA-RD-A8MW-01A 83 39 Out-of-frame Intra-chr q13.2 Transcription factor q13.13 Seq+ 47584 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-SYT13 ZC3H7A chr16 11862171 - SYT13 chr11 45268063 - Exonic hg19 STAD TCGA-RD-A8MW-01A 40 23 Out-of-frame Inter-chr p13.13 p11.2 Tumor suppressor gene Seq+ 47585 ChimerSeq STARFusion TCGA_RNA-Seq SEC63-PCBP2 SEC63 chr6 108214686 - PCBP2 chr12 53853056 + Exonic hg19 STAD TCGA-RD-A8MW-01A 39 7 In-Frame Inter-chr q21 q13.13 Seq+ 47586 ChimerSeq STARFusion TCGA_RNA-Seq RERE-TPM3 RERE chr1 8674620 - TPM3 chr1 154148724 - Exonic hg19 STAD TCGA-RD-A8MW-01A 30 16 In-Frame Intra-chr p36.23 q21.3 Seq+ 47587 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SCARA5 IGH@ chr14 107160082 - SCARA5 chr8 27845109 - Exonic hg19 STAD TCGA-RD-A8MW-01A 33 0 Out-of-frame Inter-chr 32.33 p21.1 47588 ChimerSeq STARFusion TCGA_RNA-Seq LITAF-BCAR4 LITAF chr16 11680742 - BCAR4 chr16 11914154 - Exonic hg19 STAD TCGA-RD-A8MW-01A 28 4 5'UTR-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 47589 ChimerSeq STARFusion TCGA_RNA-Seq SULF2-DEXI SULF2 chr20 46414792 - DEXI chr16 11023416 - Exonic hg19 STAD TCGA-RD-A8MW-01A 17 12 5'UTR-3'UTR Inter-chr q13.12 p13.13 Seq+ 47590 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106209411 - Exonic hg19 STAD TCGA-RD-A8MW-01A 19 0 Out-of-frame Inter-chr q21.2 32.33 47591 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076851 + IGHG1 chr14 106209411 - Exonic hg19 STAD TCGA-RD-A8MW-01A 19 0 Out-of-frame Inter-chr q21.2 q32.33 47592 ChimerSeq STARFusion TCGA_RNA-Seq SLC4A2-IGL@ SLC4A2 chr7 150771939 + IGL@ chr22 23247171 + Exonic hg19 STAD TCGA-RD-A8MW-01A 19 0 Out-of-frame Inter-chr q36.1 q11.22 47593 ChimerSeq STARFusion TCGA_RNA-Seq SLC4A2-IGLC2 SLC4A2 chr7 150771939 + IGLC2 chr22 23241801 + Exonic hg19 STAD TCGA-RD-A8MW-01A 19 0 Out-of-frame Inter-chr q36.1 q11.22 47594 ChimerSeq STARFusion TCGA_RNA-Seq SLC4A2-IGLJ2 SLC4A2 chr7 150771939 + IGLJ2 chr22 23241801 + Exonic hg19 STAD TCGA-RD-A8MW-01A 19 0 Out-of-frame Inter-chr q36.1 q11.22 47595 ChimerSeq STARFusion TCGA_RNA-Seq ANKIB1-TNFRSF17 ANKIB1 chr7 91875833 + TNFRSF17 chr16 12060052 + Exonic hg19 STAD TCGA-RD-A8MW-01A 12 9 5'UTR-CDS Inter-chr q21.2 p13.13 Seq+ 47596 ChimerSeq STARFusion TCGA_RNA-Seq ALG8-SNX29 ALG8 chr11 77835067 - SNX29 chr16 12497305 + Exonic hg19 STAD TCGA-RD-A8MW-01A 10 8 In-Frame Inter-chr q14.1 p13.13 Seq+ 47597 ChimerSeq STARFusion TCGA_RNA-Seq RERE-TPM3 RERE chr1 8684369 - TPM3 chr1 154148724 - Exonic hg19 STAD TCGA-RD-A8MW-01A 7 15 In-Frame Intra-chr p36.23 q21.3 Seq+ 47598 ChimerSeq STARFusion TCGA_RNA-Seq LITAF-BCAR4 LITAF chr16 11681007 - BCAR4 chr16 11914154 - Exonic hg19 STAD TCGA-RD-A8MW-01A 9 4 3'UTR-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 47599 ChimerSeq STARFusion TCGA_RNA-Seq ALG8-SNX29 ALG8 chr11 77830228 - SNX29 chr16 12497305 + Exonic hg19 STAD TCGA-RD-A8MW-01A 8 7 Out-of-frame Inter-chr q14.1 p13.13 Seq+ 47600 ChimerSeq STARFusion TCGA_RNA-Seq AKT2-PIM1 AKT2 chr19 40740851 - PIM1 chr6 37137992 + Exonic hg19 STAD TCGA-RD-A8MW-01A 8 5 Out-of-frame Inter-chr q13.2 AGC:Akt Oncogene p21.2 CAMK:PIM Oncogene 47601 ChimerSeq STARFusion TCGA_RNA-Seq TRMU-ATXN10 TRMU chr22 46739265 + ATXN10 chr22 46085592 + Exonic hg19 STAD TCGA-RD-A8MW-01A 5 13 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 47602 ChimerSeq STARFusion TCGA_RNA-Seq TRMU-ATXN10 TRMU chr22 46733841 + ATXN10 chr22 46085592 + Exonic hg19 STAD TCGA-RD-A8MW-01A 4 13 In-Frame Intra-chr q13.31 q13.31 Seq+ 47603 ChimerSeq STARFusion TCGA_RNA-Seq NFYA-AKT2 NFYA chr6 41040823 + AKT2 chr19 40739858 - Exonic hg19 STAD TCGA-RD-A8MW-01A 4 9 5'UTR-CDS Inter-chr p21.1 Transcription factor q13.2 AGC:Akt Oncogene Seq+ 47604 ChimerSeq STARFusion TCGA_RNA-Seq TRMU-ATXN10 TRMU chr22 46733841 + ATXN10 chr22 46088876 + Exonic hg19 STAD TCGA-RD-A8MW-01A 2 13 In-Frame Intra-chr q13.31 q13.31 Seq+ 47605 ChimerSeq STARFusion TCGA_RNA-Seq TOX3-CASC16 TOX3 chr16 52580549 - CASC16 chr16 52682024 - Exonic hg19 STAD TCGA-D7-6526-01A 63 0 Out-of-frame Intra-chr q12.1 q12.2 Seq+ 47606 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1E-FAM227A CSNK1E chr22 38710087 - FAM227A chr22 38982204 - Exonic hg19 STAD TCGA-D7-6526-01A 30 0 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 47607 ChimerSeq STARFusion TCGA_RNA-Seq FAM168A-RAB6A FAM168A chr11 73141735 - RAB6A chr11 73441868 - Exonic hg19 STAD TCGA-D7-6526-01A 29 0 In-Frame Intra-chr q13.4 q13.4 Seq+ 47608 ChimerSeq STARFusion TCGA_RNA-Seq KMT2E-ASB15 KMT2E chr7 104714124 + ASB15 chr7 123276863 + Exonic hg19 STAD TCGA-D7-6526-01A 18 0 Out-of-frame Intra-chr q22.3 q31.32 47609 ChimerSeq STARFusion TCGA_RNA-Seq CRCP-RELN CRCP chr7 65617461 + RELN chr7 103163978 - Exonic hg19 STAD TCGA-D7-6526-01A 16 0 5'UTR-CDS Intra-chr q11.21 q22.1 Seq+ 47610 ChimerSeq STARFusion TCGA_RNA-Seq ARAP1-PDE2A ARAP1 chr11 72463373 - PDE2A chr11 72297225 - Exonic hg19 STAD TCGA-D7-6526-01A 11 0 5'UTR-CDS Intra-chr q13.4 q13.4 47611 ChimerSeq STARFusion TCGA_RNA-Seq TOX3-CASC16 TOX3 chr16 52580549 - CASC16 chr16 52624979 - Exonic hg19 STAD TCGA-D7-6526-01A 11 0 Out-of-frame Intra-chr q12.1 q12.2 Seq+ 47612 ChimerSeq STARFusion TCGA_RNA-Seq FAM120A-C9orf89 FAM120A chr9 96214671 + C9orf89 chr9 95875274 + Exonic hg19 STAD TCGA-BR-8289-01A 240 88 Out-of-frame Intra-chr q22.31 Seq+ 47613 ChimerSeq STARFusion TCGA_RNA-Seq YEATS4-LYZ YEATS4 chr12 69764755 + LYZ chr12 69743888 + Exonic hg19 STAD TCGA-BR-8289-01A 212 92 In-Frame Intra-chr q15 q15 Seq+ 47614 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-PSMD3 WIPF2 chr17 38375744 + PSMD3 chr17 38144936 + Exonic hg19 STAD TCGA-BR-8289-01A 208 107 5'UTR-CDS Intra-chr q21.2 q21.1 Seq+ 47615 ChimerSeq STARFusion TCGA_RNA-Seq GALE-PITHD1 GALE chr1 24125858 - PITHD1 chr1 24112163 + Exonic hg19 STAD TCGA-BR-8289-01A 86 134 Out-of-frame Intra-chr p36.11 p36.11 Seq+ 47616 ChimerSeq STARFusion TCGA_RNA-Seq SRSF4-MECR SRSF4 chr1 29508158 - MECR chr1 29533417 - Exonic hg19 STAD TCGA-BR-8289-01A 103 32 Out-of-frame Intra-chr p35.3 p35.3 Seq+ 47617 ChimerSeq STARFusion TCGA_RNA-Seq RAB1A-C7orf50 RAB1A chr2 65357027 - C7orf50 chr7 1040187 - Exonic hg19 STAD TCGA-BR-8289-01A 104 27 In-Frame Inter-chr p14 p22.3 Seq+ 47618 ChimerSeq STARFusion TCGA_RNA-Seq CBFA2T2-ACOX1 CBFA2T2 chr20 32078107 + ACOX1 chr17 73953647 - Exonic hg19 STAD TCGA-BR-8289-01A 77 3 In-Frame Inter-chr q11.21 q25.1 Seq+ 47619 ChimerSeq STARFusion TCGA_RNA-Seq ATP1A1-IGSF3 ATP1A1 chr1 116946597 + IGSF3 chr1 117122499 - Exonic hg19 STAD TCGA-BR-8289-01A 64 18 In-Frame Intra-chr p13.1 p13.1 Seq+ 47620 ChimerSeq STARFusion TCGA_RNA-Seq GDE1-FLYWCH2 GDE1 chr16 19522161 - FLYWCH2 chr16 2945221 + Exonic hg19 STAD TCGA-BR-8289-01A 58 32 CDS-5'UTR Intra-chr p12.3 p13.3 Seq+ 47621 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC3-CLDN10 DNAJC3 chr13 96329591 + CLDN10 chr13 96212386 + Exonic hg19 STAD TCGA-BR-8289-01A 47 21 In-Frame Intra-chr q32.1 q32.1 Seq+ 47622 ChimerSeq STARFusion TCGA_RNA-Seq FKBP11-PRKAG1 FKBP11 chr12 49317565 - PRKAG1 chr12 49399635 - Exonic hg19 STAD TCGA-BR-8289-01A 46 14 In-Frame Intra-chr q13.12 q13.12 Seq+ 47623 ChimerSeq STARFusion TCGA_RNA-Seq GMCL1-ANXA4 GMCL1 chr2 70057284 + ANXA4 chr2 70008652 + Exonic hg19 STAD TCGA-BR-8289-01A 40 32 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 47624 ChimerSeq STARFusion TCGA_RNA-Seq IHH-NHEJ1 IHH chr2 219920538 - NHEJ1 chr2 219942928 - Exonic hg19 STAD TCGA-BR-8289-01A 41 15 Out-of-frame Intra-chr q35 q35 Seq+ 47625 ChimerSeq STARFusion TCGA_RNA-Seq IHH-SLC23A3 IHH chr2 219920538 - SLC23A3 chr2 219942928 - Exonic hg19 STAD TCGA-BR-8289-01A 41 15 Out-of-frame Intra-chr q35 q35 47626 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1456-LEKR1 KIAA1456 chr8 12809867 + LEKR1 chr3 156763129 + Exonic hg19 STAD TCGA-BR-8289-01A 40 19 5'UTR-CDS Inter-chr p22 q25.31 Seq+ 47627 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3B-TMEM212 FNDC3B chr3 171757561 + TMEM212 chr3 171633558 + Exonic hg19 STAD TCGA-BR-8289-01A 38 16 5'UTR-3'UTR Intra-chr q26.31 q26.31 Seq+ 47628 ChimerSeq STARFusion TCGA_RNA-Seq SON-IL10RB SON chr21 34932081 + IL10RB chr21 34668489 + Exonic hg19 STAD TCGA-BR-8289-01A 30 8 In-Frame Intra-chr q22.11 Transcription factor q22.11 Seq+ 47629 ChimerSeq STARFusion TCGA_RNA-Seq GMCL1-ANXA4 GMCL1 chr2 70057284 + ANXA4 chr2 70031665 + Exonic hg19 STAD TCGA-BR-8289-01A 19 31 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 47630 ChimerSeq STARFusion TCGA_RNA-Seq SAE1-ARHGAP35 SAE1 chr19 47673180 + ARHGAP35 chr19 47491246 + Exonic hg19 STAD TCGA-BR-8289-01A 22 14 In-Frame Intra-chr q13.32 q13.32 Transcription factor Seq+ 47631 ChimerSeq STARFusion TCGA_RNA-Seq SOCS1-BCAR4 SOCS1 chr16 11349936 - BCAR4 chr16 11914154 - Exonic hg19 STAD TCGA-BR-8289-01A 18 18 5'UTR-3'UTR Intra-chr p13.13 Oncogene Tumor suppressor gene p13.13 Seq+ 47632 ChimerSeq STARFusion TCGA_RNA-Seq SPATS2-TUBA1C SPATS2 chr12 49761370 + TUBA1C chr12 49602615 + Exonic hg19 STAD TCGA-BR-8289-01A 18 18 5'UTR-5'UTR Intra-chr q13.12 q13.12 47633 ChimerSeq STARFusion TCGA_RNA-Seq TCOF1-GPX3 TCOF1 chr5 149740774 + GPX3 chr5 150404901 + Exonic hg19 STAD TCGA-BR-8289-01A 22 1 Out-of-frame Intra-chr q32 q33.1 Tumor suppressor gene Seq+ 47634 ChimerSeq STARFusion TCGA_RNA-Seq THRA-CDK12 THRA chr17 38245586 + CDK12 chr17 37686884 + Exonic hg19 STAD TCGA-BR-8289-01A 20 9 Out-of-frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q12 Oncogene Seq+ 47635 ChimerSeq STARFusion TCGA_RNA-Seq KDM5A-NINJ2 KDM5A chr12 459787 - NINJ2 chr12 675344 - Exonic hg19 STAD TCGA-BR-8289-01A 20 1 In-Frame Intra-chr p13.33 Tumor suppressor gene p13.33 Seq+ 47636 ChimerSeq STARFusion TCGA_RNA-Seq TC2N-TRIP11 TC2N chr14 92278656 - TRIP11 chr14 92474196 - Exonic hg19 STAD TCGA-BR-8289-01A 18 8 Out-of-frame Intra-chr q32.12 Oncogene Seq+ 47637 ChimerSeq STARFusion TCGA_RNA-Seq URI1-C19orf12 URI1 chr19 30433571 + C19orf12 chr19 30193884 - Exonic hg19 STAD TCGA-BR-8289-01A 17 8 Out-of-frame Intra-chr q12 q12 Seq+ 47638 ChimerSeq STARFusion TCGA_RNA-Seq SPATS2-TUBA1C SPATS2 chr12 49765073 + TUBA1C chr12 49602615 + Exonic hg19 STAD TCGA-BR-8289-01A 14 18 5'UTR-5'UTR Intra-chr q13.12 q13.12 47639 ChimerSeq STARFusion TCGA_RNA-Seq ZNF681-IMMP2L ZNF681 chr19 23941549 - IMMP2L chr7 110603621 - Exonic hg19 STAD TCGA-BR-8289-01A 13 15 Out-of-frame Inter-chr p12 Transcription factor q31.1 Seq+ 47640 ChimerSeq STARFusion TCGA_RNA-Seq POGZ-PSMD4 POGZ chr1 151414557 - PSMD4 chr1 151236390 + Exonic hg19 STAD TCGA-BR-8289-01A 13 8 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 47641 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1L1-DLC1 WHSC1L1 chr8 38239317 - DLC1 chr8 13259128 - Exonic hg19 STAD TCGA-BR-8289-01A 13 8 5'UTR-CDS Intra-chr p11.23 Tumor suppressor gene p22 Tumor suppressor gene Seq+ 47642 ChimerSeq STARFusion TCGA_RNA-Seq USP6NL-UPF2 USP6NL chr10 11523769 - UPF2 chr10 11985167 - Exonic hg19 STAD TCGA-BR-8289-01A 13 7 Out-of-frame Intra-chr p14 p14 Seq+ 47643 ChimerSeq STARFusion TCGA_RNA-Seq TECR-TGFBR3L TECR chr19 14640523 + TGFBR3L chr19 7982942 + Exonic hg19 STAD TCGA-BR-8289-01A 9 21 Out-of-frame Intra-chr p13.12 p13.2 Seq+ 47644 ChimerSeq STARFusion TCGA_RNA-Seq THRA-CDK12 THRA chr17 38245586 + CDK12 chr17 37686857 + Exonic hg19 STAD TCGA-BR-8289-01A 12 9 Out-of-frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q12 Oncogene Seq+ 47645 ChimerSeq STARFusion TCGA_RNA-Seq KMT2E-LHFPL3 KMT2E chr7 104707254 + LHFPL3 chr7 104546634 + Exonic hg19 STAD TCGA-BR-8289-01A 12 8 Out-of-frame Intra-chr q22.3 q22.2 47646 ChimerSeq STARFusion TCGA_RNA-Seq FBXW4-C10orf76 FBXW4 chr10 103432672 - C10orf76 chr10 103609649 - Exonic hg19 STAD TCGA-BR-8289-01A 12 7 In-Frame Intra-chr q24.32 q24.32 Seq+ 47647 ChimerSeq STARFusion TCGA_RNA-Seq TECR-GIPC1 TECR chr19 14640523 + GIPC1 chr19 14593818 - Exonic hg19 STAD TCGA-BR-8289-01A 5 34 5'UTR-5'UTR Intra-chr p13.12 p13.12 Seq+ 47648 ChimerSeq STARFusion TCGA_RNA-Seq FAM76A-GPR3 FAM76A chr1 28075665 + GPR3 chr1 27720298 + Exonic hg19 STAD TCGA-BR-8289-01A 11 6 CDS-5'UTR Intra-chr p35.3 p36.11 Seq+ 47649 ChimerSeq STARFusion TCGA_RNA-Seq TECR-GIPC1 TECR chr19 14640523 + GIPC1 chr19 14591590 - Exonic hg19 STAD TCGA-BR-8289-01A 4 34 In-Frame Intra-chr p13.12 p13.12 Seq+ 47650 ChimerSeq STARFusion TCGA_RNA-Seq TOP2A-SMARCE1 TOP2A chr17 38554810 - SMARCE1 chr17 38802099 - Exonic hg19 STAD TCGA-BR-8289-01A 10 10 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 47651 ChimerSeq STARFusion TCGA_RNA-Seq MIR639-TGFBR3L MIR639 chr19 14640523 + TGFBR3L chr19 7982942 + Exonic hg19 STAD TCGA-BR-8289-01A 6 19 Out-of-frame Intra-chr p13.12 p13.2 47652 ChimerSeq STARFusion TCGA_RNA-Seq TMSB4X-CTSB TMSB4X chrX 12994437 + CTSB chr8 11702324 - Exonic hg19 STAD TCGA-BR-8289-01A 8 11 Out-of-frame Inter-chr p22.2 p23.1 47653 ChimerSeq STARFusion TCGA_RNA-Seq PGM2L1-CHRDL2 PGM2L1 chr11 74109096 - CHRDL2 chr11 74424524 - Exonic hg19 STAD TCGA-BR-8289-01A 9 6 In-Frame Intra-chr q13.4 q13.4 Seq+ 47654 ChimerSeq STARFusion TCGA_RNA-Seq STK11-BSG STK11 chr19 1207202 + BSG chr19 580379 + Exonic hg19 STAD TCGA-BR-8289-01A 9 6 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 47655 ChimerSeq STARFusion TCGA_RNA-Seq MIR639-GIPC1 MIR639 chr19 14640523 + GIPC1 chr19 14591590 - Exonic hg19 STAD TCGA-BR-8289-01A 3 29 3'UTR-CDS Intra-chr p13.12 p13.12 47656 ChimerSeq STARFusion TCGA_RNA-Seq MIR639-GIPC1 MIR639 chr19 14640523 + GIPC1 chr19 14593818 - Exonic hg19 STAD TCGA-BR-8289-01A 3 29 3'UTR-5'UTR Intra-chr p13.12 p13.12 47657 ChimerSeq STARFusion TCGA_RNA-Seq TECR-TGFBR3L TECR chr19 14640523 + TGFBR3L chr19 7982358 + Exonic hg19 STAD TCGA-BR-8289-01A 5 21 Out-of-frame Intra-chr p13.12 p13.2 Seq+ 47658 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-CDK12 ERBB2 chr17 37886762 + CDK12 chr17 37667831 + Exonic hg19 STAD TCGA-BR-8289-01A 8 7 Out-of-frame Intra-chr q12 Oncogene q12 Oncogene Seq+ 47659 ChimerSeq STARFusion TCGA_RNA-Seq FBXW4-C10orf76 FBXW4 chr10 103427643 - C10orf76 chr10 103609649 - Exonic hg19 STAD TCGA-BR-8289-01A 8 6 Out-of-frame Intra-chr q24.32 q24.32 Seq+ 47660 ChimerSeq STARFusion TCGA_RNA-Seq PGM2L1-CHRDL2 PGM2L1 chr11 74109096 - CHRDL2 chr11 74429877 - Exonic hg19 STAD TCGA-BR-8289-01A 7 6 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 47661 ChimerSeq STARFusion TCGA_RNA-Seq SPATS2-TUBA1C SPATS2 chr12 49765073 + TUBA1C chr12 49621874 + Exonic hg19 STAD TCGA-BR-8289-01A 4 18 5'UTR-5'UTR Intra-chr q13.12 q13.12 47662 ChimerSeq STARFusion TCGA_RNA-Seq STK11-BSG STK11 chr19 1207202 + BSG chr19 579500 + Exonic hg19 STAD TCGA-BR-8289-01A 7 6 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 47663 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R1C-EIF2B2 PPP1R1C chr2 182819361 + EIF2B2 chr14 75469978 + Exonic hg19 STAD TCGA-BR-8289-01A 6 9 5'UTR-CDS Inter-chr q31.3 q24.3 Seq+ 47664 ChimerSeq STARFusion TCGA_RNA-Seq KMT2E-LHFPL3 KMT2E chr7 104707254 + LHFPL3 chr7 104485829 + Exonic hg19 STAD TCGA-BR-8289-01A 6 8 Out-of-frame Intra-chr q22.3 q22.2 47665 ChimerSeq STARFusion TCGA_RNA-Seq SPATS2-TUBA1C SPATS2 chr12 49761370 + TUBA1C chr12 49621874 + Exonic hg19 STAD TCGA-BR-8289-01A 3 18 5'UTR-5'UTR Intra-chr q13.12 q13.12 47666 ChimerSeq STARFusion TCGA_RNA-Seq SOCS1-BCAR4 SOCS1 chr16 11349936 - BCAR4 chr16 11915612 - Exonic hg19 STAD TCGA-BR-8289-01A 2 18 5'UTR-3'UTR Intra-chr p13.13 Oncogene Tumor suppressor gene p13.13 Seq+ 47667 ChimerSeq STARFusion TCGA_RNA-Seq ZNF681-IMMP2L ZNF681 chr19 23937625 - IMMP2L chr7 110603621 - Exonic hg19 STAD TCGA-BR-8289-01A 2 15 Out-of-frame Inter-chr p12 Transcription factor q31.1 Seq+ 47668 ChimerSeq STARFusion TCGA_RNA-Seq LRIG2-OR8K5 LRIG2 chr1 113643110 + OR8K5 chr11 55927811 - Exonic hg19 STAD TCGA-VQ-AA6A-01A 208 66 CDS-5'UTR Inter-chr p13.2 q12.1 47669 ChimerSeq STARFusion TCGA_RNA-Seq LRIG2-OR8K5 LRIG2 chr1 113646357 + OR8K5 chr11 55927811 - Exonic hg19 STAD TCGA-VQ-AA6A-01A 68 66 Out-of-frame Inter-chr p13.2 q12.1 47670 ChimerSeq STARFusion TCGA_RNA-Seq ESCO1-ARHGAP28 ESCO1 chr18 19180584 - ARHGAP28 chr18 6824761 + Exonic hg19 STAD TCGA-VQ-AA6A-01A 52 10 5'UTR-5'UTR Intra-chr q11.2 p11.31 Seq+ 47671 ChimerSeq STARFusion TCGA_RNA-Seq RRP7B-NFAM1 RRP7B chr22 42976223 - NFAM1 chr22 42793962 - Exonic hg19 STAD TCGA-VQ-AA6A-01A 51 7 3'UTR-CDS Intra-chr q13.2 47672 ChimerSeq STARFusion TCGA_RNA-Seq MTHFR-EXOSC10 MTHFR chr1 11860269 - EXOSC10 chr1 11155938 - Exonic hg19 STAD TCGA-VQ-AA6A-01A 49 12 Out-of-frame Intra-chr p36.22 p36.22 Seq+ 47673 ChimerSeq STARFusion TCGA_RNA-Seq LRIG2-OR8K5 LRIG2 chr1 113646407 + OR8K5 chr11 55927811 - Exonic hg19 STAD TCGA-VQ-AA6A-01A 30 66 Out-of-frame Inter-chr p13.2 q12.1 47674 ChimerSeq STARFusion TCGA_RNA-Seq MSL2-UBASH3B MSL2 chr3 135913814 - UBASH3B chr11 122669650 + Exonic hg19 STAD TCGA-VQ-AA6A-01A 29 6 In-Frame Inter-chr q22.3 q24.1 Seq+ 47675 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-ANKRD13B TAOK1 chr17 27778698 + ANKRD13B chr17 27934760 + Exonic hg19 STAD TCGA-VQ-AA6A-01A 16 2 In-Frame Intra-chr q11.2 q11.2 Seq+ 47676 ChimerSeq STARFusion TCGA_RNA-Seq ESCO1-ARHGAP28 ESCO1 chr18 19180584 - ARHGAP28 chr18 6778945 + Exonic hg19 STAD TCGA-VQ-AA6A-01A 9 10 5'UTR-5'UTR Intra-chr q11.2 p11.31 Seq+ 47677 ChimerSeq STARFusion TCGA_RNA-Seq SCYL2-SLC17A8 SCYL2 chr12 100661174 + SLC17A8 chr12 100774479 + Exonic hg19 STAD TCGA-VQ-A91N-01A 84 5 5'UTR-CDS Intra-chr q23.1 Other:SCY1 q23.1 47678 ChimerSeq STARFusion TCGA_RNA-Seq RBM47-APBB2 RBM47 chr4 40468594 - APBB2 chr4 40895428 - Exonic hg19 STAD TCGA-VQ-A91N-01A 82 9 5'UTR-CDS Intra-chr p14 p13 Seq+ 47679 ChimerSeq STARFusion TCGA_RNA-Seq TFB2M-SMYD3 TFB2M chr1 246727648 - SMYD3 chr1 246093239 - Exonic hg19 STAD TCGA-VQ-A91N-01A 52 10 In-Frame Intra-chr q44 q44 Transcription factor Seq+ 47680 ChimerSeq STARFusion TCGA_RNA-Seq PINX1-MSRA PINX1 chr8 10689175 - MSRA chr8 10065343 + Exonic hg19 STAD TCGA-VQ-A91N-01A 49 5 In-Frame Intra-chr p23.1 Tumor suppressor gene p23.1 Seq+ 47681 ChimerSeq STARFusion TCGA_RNA-Seq SOX7-MSRA SOX7 chr8 10689175 - MSRA chr8 10065343 + Exonic hg19 STAD TCGA-VQ-A91N-01A 49 5 5'UTR-5'UTR Intra-chr p23.1 Tumor suppressor gene Transcription factor p23.1 47682 ChimerSeq STARFusion TCGA_RNA-Seq SOX7-MSRA SOX7 chr8 10689175 - MSRA chr8 10065343 + Exonic hg19 STAD TCGA-VQ-A91N-01A 49 5 5'UTR-5'UTR Intra-chr p23.1 Tumor suppressor gene Transcription factor p23.1 47683 ChimerSeq STARFusion TCGA_RNA-Seq SCYL2-SLC17A8 SCYL2 chr12 100661570 + SLC17A8 chr12 100774479 + Exonic hg19 STAD TCGA-VQ-A91N-01A 44 5 5'UTR-CDS Intra-chr q23.1 Other:SCY1 q23.1 47684 ChimerSeq STARFusion TCGA_RNA-Seq RBM6-RNF123 RBM6 chr3 49977658 + RNF123 chr3 49749912 + Exonic hg19 STAD TCGA-VQ-A91N-01A 36 21 5'UTR-CDS Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 47685 ChimerSeq STARFusion TCGA_RNA-Seq XPO7-MYOM2 XPO7 chr8 21777299 + MYOM2 chr8 2088646 + Exonic hg19 STAD TCGA-VQ-A91N-01A 41 0 Out-of-frame Intra-chr p21.3 p23.3 Seq+ 47686 ChimerSeq STARFusion TCGA_RNA-Seq CDC25A-SHISA5 CDC25A chr3 48229860 - SHISA5 chr3 48520666 - Exonic hg19 STAD TCGA-VQ-A91N-01A 39 0 5'UTR-CDS Intra-chr p21.31 p21.31 47687 ChimerSeq STARFusion TCGA_RNA-Seq MCU-CHST3 MCU chr10 74452059 + CHST3 chr10 73765494 + Exonic hg19 STAD TCGA-VQ-A91N-01A 30 2 CDS-5'UTR Intra-chr q22.1 q22.1 Seq+ 47688 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A14-PDGFRL SLC39A14 chr8 22224921 + PDGFRL chr8 17478560 + Exonic hg19 STAD TCGA-VQ-A91N-01A 27 2 5'UTR-CDS Intra-chr p21.3 p22 Tumor suppressor gene Seq+ 47689 ChimerSeq STARFusion TCGA_RNA-Seq RBM6-RNF123 RBM6 chr3 49977658 + RNF123 chr3 49742417 + Exonic hg19 STAD TCGA-VQ-A91N-01A 21 21 5'UTR-CDS Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 47690 ChimerSeq STARFusion TCGA_RNA-Seq NPHP4-ACOT7 NPHP4 chr1 6038330 - ACOT7 chr1 6341346 - Exonic hg19 STAD TCGA-VQ-A91N-01A 23 3 Out-of-frame Intra-chr p36.31 p36.31 Seq+ 47691 ChimerSeq STARFusion TCGA_RNA-Seq MSRA-LPL MSRA chr8 10102733 + LPL chr8 19805691 + Exonic hg19 STAD TCGA-VQ-A91N-01A 22 3 In-Frame Intra-chr p23.1 p21.3 Seq+ 47692 ChimerSeq STARFusion TCGA_RNA-Seq RBM6-RNF123 RBM6 chr3 49977658 + RNF123 chr3 49744224 + Exonic hg19 STAD TCGA-VQ-A91N-01A 17 21 5'UTR-CDS Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 47693 ChimerSeq STARFusion TCGA_RNA-Seq PAK2-CHCHD6 PAK2 chr3 196467028 + CHCHD6 chr3 126499183 + Exonic hg19 STAD TCGA-VQ-A91N-01A 20 7 5'UTR-CDS Intra-chr q29 STE:STE20 q21.3 Seq+ 47694 ChimerSeq STARFusion TCGA_RNA-Seq PAK2-CHCHD6 PAK2 chr3 196467028 + CHCHD6 chr3 126571490 + Exonic hg19 STAD TCGA-VQ-A91N-01A 19 7 5'UTR-CDS Intra-chr q29 STE:STE20 q21.3 Seq+ 47695 ChimerSeq STARFusion TCGA_RNA-Seq ROR1-PGM1 ROR1 chr1 64240179 + PGM1 chr1 64114188 + Exonic hg19 STAD TCGA-VQ-A91N-01A 20 1 In-Frame Intra-chr p31.3 TK:Ror p31.3 Seq+ 47696 ChimerSeq STARFusion TCGA_RNA-Seq TRIM35-PEBP4 TRIM35 chr8 27168318 - PEBP4 chr8 22785233 - Exonic hg19 STAD TCGA-VQ-A91N-01A 16 4 CDS-5'UTR Intra-chr p21.2 Tumor suppressor gene p21.3 Seq+ 47697 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A14-DEFB135 SLC39A14 chr8 22224921 + DEFB135 chr8 11841930 + Exonic hg19 STAD TCGA-VQ-A91N-01A 14 8 5'UTR-CDS Intra-chr p21.3 p23.1 Seq+ 47698 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-BRPF3 KCTD20 chr6 36410888 + BRPF3 chr6 36168074 + Exonic hg19 STAD TCGA-VQ-A91N-01A 12 11 5'UTR-5'UTR Intra-chr p21.31 p21.31 Seq+ 47699 ChimerSeq STARFusion TCGA_RNA-Seq MLLT10-SKIDA1 MLLT10 chr10 21884369 + SKIDA1 chr10 21812800 - Exonic hg19 STAD TCGA-VQ-A91N-01A 14 1 Out-of-frame Intra-chr p12.31 Oncogene p12.31 Seq+ 47700 ChimerSeq STARFusion TCGA_RNA-Seq TC2N-FBLN5 TC2N chr14 92280047 - FBLN5 chr14 92406960 - Exonic hg19 STAD TCGA-VQ-A91N-01A 12 2 Out-of-frame Intra-chr q32.12 Seq+ 47701 ChimerSeq STARFusion TCGA_RNA-Seq RBM6-RNF123 RBM6 chr3 49977658 + RNF123 chr3 49743415 + Exonic hg19 STAD TCGA-VQ-A91N-01A 5 21 5'UTR-CDS Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 47702 ChimerSeq STARFusion TCGA_RNA-Seq MED24-TBC1D3 MED24 chr17 38209551 - TBC1D3 chr17 36347082 - Exonic hg19 STAD TCGA-FP-A8CX-01A 194 64 CDS-3'UTR Intra-chr q21.1 q12 47703 ChimerSeq STARFusion TCGA_RNA-Seq ZFP91-RPL5P29 ZFP91 chr11 58385041 + RPL5P29 chr11 56125504 + Exonic hg19 STAD TCGA-FP-A8CX-01A 63 18 Out-of-frame Intra-chr q12.1 Transcription factor Seq+ 47704 ChimerSeq STARFusion TCGA_RNA-Seq RAVER1-TMEM259 RAVER1 chr19 10439318 - TMEM259 chr19 1014472 - Exonic hg19 STAD TCGA-FP-A8CX-01A 36 14 Out-of-frame Intra-chr p13.2 p13.3 Seq+ 47705 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-CLDN11 CPSF6 chr12 69633486 + CLDN11 chr3 170178087 + Exonic hg19 STAD TCGA-FP-A8CX-01A 29 5 CDS-3'UTR Inter-chr q15 q26.2 Seq+ 47706 ChimerSeq STARFusion TCGA_RNA-Seq CLDN11-MECOM CLDN11 chr3 170194661 + MECOM chr3 169099312 - Exonic hg19 STAD TCGA-FP-A8CX-01A 18 7 3'UTR-CDS Intra-chr q26.2 q26.2 Transcription factor Seq+ 47707 ChimerSeq STARFusion TCGA_RNA-Seq LRRIQ4-MIEN1 LRRIQ4 chr3 169540729 + MIEN1 chr17 37886544 - Exonic hg19 STAD TCGA-FP-A8CX-01A 18 4 Out-of-frame Inter-chr q26.2 q12 Seq+ 47708 ChimerSeq STARFusion TCGA_RNA-Seq PRKCI-CLDN11 PRKCI chr3 169940558 + CLDN11 chr3 170194559 + Exonic hg19 STAD TCGA-FP-A8CX-01A 13 8 CDS-3'UTR Intra-chr q26.2 q26.2 Seq+ 47709 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142481912 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-FP-A8CX-01A 14 0 3'UTR-CDS Inter-chr q13.41 47710 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525072 - IGHG1 chr14 106209410 - Exonic hg19 STAD TCGA-FP-A8CX-01A 13 0 Out-of-frame Inter-chr q34 Oncogene q32.33 47711 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142471340 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-FP-A8CX-01A 13 0 3'UTR-CDS Inter-chr q13.41 47712 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142460418 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-FP-A8CX-01A 13 0 In-Frame Inter-chr q13.41 47713 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469662 + FTH1P27 chrX 37364954 + Exonic hg19 STAD TCGA-FP-A8CX-01A 12 0 Out-of-frame Inter-chr q13.33 p21.1 47714 ChimerSeq STARFusion TCGA_RNA-Seq CLDN11-MECOM CLDN11 chr3 170178200 + MECOM chr3 169099312 - Exonic hg19 STAD TCGA-FP-A8CX-01A 7 7 3'UTR-CDS Intra-chr q26.2 q26.2 Transcription factor Seq+ 47715 ChimerSeq STARFusion TCGA_RNA-Seq GPR160-MED24 GPR160 chr3 169756831 + MED24 chr17 38209888 - Exonic hg19 STAD TCGA-FP-A8CX-01A 6 7 5'UTR-5'UTR Inter-chr q26.2 q21.1 Seq+ 47716 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-CEACAM5 LYZ chr12 69747259 + CEACAM5 chr19 42233371 + Exonic hg19 STAD TCGA-FP-A8CX-01A 4 8 Out-of-frame Inter-chr q15 q13.2 47717 ChimerSeq STARFusion TCGA_RNA-Seq REG1A-DDX52 REG1A chr2 79350526 + DDX52 chr17 35985986 - Exonic hg19 STAD TCGA-BR-8589-01A 11 0 Out-of-frame Inter-chr p12 q12 47718 ChimerSeq STARFusion TCGA_RNA-Seq REG3A-C3 REG3A chr2 79385480 - C3 chr19 6711090 - Exonic hg19 STAD TCGA-BR-8589-01A 3 11 Out-of-frame Inter-chr p12 p13.3 47719 ChimerSeq STARFusion TCGA_RNA-Seq PQLC2-PTBP1 PQLC2 chr1 19652862 + PTBP1 chr19 811932 + Exonic hg19 STAD TCGA-BR-A4QL-01A 21 0 Out-of-frame Inter-chr p36.13 p13.3 47720 ChimerSeq STARFusion TCGA_RNA-Seq MTUS1-ASAH1 MTUS1 chr8 17601113 - ASAH1 chr8 17920739 - Exonic hg19 STAD TCGA-HU-A4GF-01A 55 21 In-Frame Intra-chr p22 Tumor suppressor gene p22 Seq+ 47721 ChimerSeq STARFusion TCGA_RNA-Seq SNRNP40-SPOCD1 SNRNP40 chr1 31754221 - SPOCD1 chr1 32267306 - Exonic hg19 STAD TCGA-HU-A4GF-01A 50 11 In-Frame Intra-chr p35.2 p35.2 Seq+ 47722 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP8-NTF6G ARHGAP8 chr22 45243930 + NTF6G chr19 49533074 + Exonic hg19 STAD TCGA-HU-A4GF-01A 38 9 Out-of-frame Inter-chr q13.31 q13.33 Seq+ 47723 ChimerSeq STARFusion TCGA_RNA-Seq SNRNP40-MAP2K5 SNRNP40 chr1 31762101 - MAP2K5 chr15 68040569 + Exonic hg19 STAD TCGA-HU-A4GF-01A 35 14 In-Frame Inter-chr p35.2 q23 STE:STE7 Seq+ 47724 ChimerSeq STARFusion TCGA_RNA-Seq SNRNP40-MAP2K5 SNRNP40 chr1 31762101 - MAP2K5 chr15 68040907 + Exonic hg19 STAD TCGA-HU-A4GF-01A 26 14 In-Frame Inter-chr p35.2 q23 STE:STE7 Seq+ 47725 ChimerSeq STARFusion TCGA_RNA-Seq SPAST-DPY30 SPAST chr2 32289315 + DPY30 chr2 32168452 - Exonic hg19 STAD TCGA-HU-A4GF-01A 17 10 CDS-3'UTR Intra-chr p22.3 p22.3 47726 ChimerSeq STARFusion TCGA_RNA-Seq SPAST-MEMO1 SPAST chr2 32289315 + MEMO1 chr2 32168452 - Exonic hg19 STAD TCGA-HU-A4GF-01A 17 10 In-Frame Intra-chr p22.3 p22.3 Seq+ 47727 ChimerSeq STARFusion TCGA_RNA-Seq TOM1L1-STXBP4 TOM1L1 chr17 53027487 + STXBP4 chr17 53218671 + Exonic hg19 STAD TCGA-HU-A4GF-01A 16 6 Out-of-frame Intra-chr q22 q22 47728 ChimerSeq STARFusion TCGA_RNA-Seq GTPBP6-PPP2R3B GTPBP6 chrY 178086 - PPP2R3B chrY 252666 - Exonic hg19 STAD TCGA-HU-A4GF-01A 17 1 CDS-3'UTR Intra-chr p22.33 p22.33 Seq+ 47729 ChimerSeq STARFusion TCGA_RNA-Seq NTSR1-OSBPL2 NTSR1 chr20 61341273 + OSBPL2 chr20 60854213 + Exonic hg19 STAD TCGA-HU-A4GF-01A 15 1 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 47730 ChimerSeq STARFusion TCGA_RNA-Seq PRSS51-RP1L1 PRSS51 chr8 10404940 - RP1L1 chr8 10480730 - Exonic hg19 STAD TCGA-HU-A4GF-01A 11 0 Out-of-frame Intra-chr p23.1 p23.1 47731 ChimerSeq STARFusion TCGA_RNA-Seq PRKRIP1-DTX2P1 PRKRIP1 chr7 102006523 + DTX2P1 chr7 76607845 + Exonic hg19 STAD TCGA-HU-A4GF-01A 5 6 Out-of-frame Intra-chr q22.1 q11.23 47732 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-HAUS8 CEACAM5 chr19 42233234 + HAUS8 chr19 17184668 - Exonic hg19 STAD TCGA-CG-4436-01A 6 0 Out-of-frame Intra-chr q13.2 p13.11 47733 ChimerSeq STARFusion TCGA_RNA-Seq EMC8-MMACHC EMC8 chr16 85810208 - MMACHC chr1 45976734 + Exonic hg19 STAD TCGA-CG-4436-01A 5 0 Out-of-frame Inter-chr q24.1 p34.1 47734 ChimerSeq STARFusion TCGA_RNA-Seq MRRF-GLIS3 MRRF chr9 125075665 + GLIS3 chr9 3937189 - Exonic hg19 STAD TCGA-CG-4436-01A 2 0 In-Frame Intra-chr q33.2 p24.2 Transcription factor 47735 ChimerSeq STARFusion TCGA_RNA-Seq OLFM2-EIF3G OLFM2 chr19 10046980 - EIF3G chr19 10226750 - Exonic hg19 STAD TCGA-CD-8525-01A 32 12 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 47736 ChimerSeq STARFusion TCGA_RNA-Seq FAM60A-MADCAM1 FAM60A chr12 31478958 - MADCAM1 chr19 501669 + Exonic hg19 STAD TCGA-CD-8525-01A 10 16 5'UTR-CDS Inter-chr p13.3 Seq+ 47737 ChimerSeq STARFusion TCGA_RNA-Seq NAA60-CLDN9 NAA60 chr16 3508181 + CLDN9 chr16 3064300 + Exonic hg19 STAD TCGA-CD-8525-01A 9 5 5'UTR-3'UTR Intra-chr p13.3 p13.3 Seq+ 47738 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G3-HP1BP3 EIF4G3 chr1 21415631 - HP1BP3 chr1 21083749 - Exonic hg19 STAD TCGA-CD-8525-01A 7 7 5'UTR-CDS Intra-chr p36.12 p36.12 Seq+ 47739 ChimerSeq STARFusion TCGA_RNA-Seq CCDC88C-SMEK1 CCDC88C chr14 91875003 - SMEK1 chr14 91929221 - Exonic hg19 STAD TCGA-CD-8525-01A 7 4 In-Frame Intra-chr q32.12 47740 ChimerSeq STARFusion TCGA_RNA-Seq CLASRP-PVR CLASRP chr19 45573362 + PVR chr19 45157169 + Exonic hg19 STAD TCGA-CD-8525-01A 7 4 In-Frame Intra-chr q13.32 q13.31 Seq+ 47741 ChimerSeq STARFusion TCGA_RNA-Seq VPS37B-SPTBN1 VPS37B chr12 123380499 - SPTBN1 chr2 54753509 + Exonic hg19 STAD TCGA-CD-8525-01A 7 3 CDS-5'UTR Inter-chr q24.31 p16.2 Tumor suppressor gene Seq+ 47742 ChimerSeq STARFusion TCGA_RNA-Seq FAM60A-MADCAM1 FAM60A chr12 31478960 - MADCAM1 chr19 501667 + Exonic hg19 STAD TCGA-CD-8525-01A 3 16 Out-of-frame Inter-chr p13.3 Seq+ 47743 ChimerSeq STARFusion TCGA_RNA-Seq NFYC-ST3GAL3 NFYC chr1 41157539 + ST3GAL3 chr1 44360055 + Exonic hg19 STAD TCGA-CD-8525-01A 5 5 5'UTR-CDS Intra-chr p34.2 Transcription factor p34.1 Seq+ 47744 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G3-HP1BP3 EIF4G3 chr1 21415631 - HP1BP3 chr1 21076375 - Exonic hg19 STAD TCGA-CD-8525-01A 4 7 5'UTR-CDS Intra-chr p36.12 p36.12 Seq+ 47745 ChimerSeq STARFusion TCGA_RNA-Seq PAPSS2-ATAD1 PAPSS2 chr10 89419765 + ATAD1 chr10 89516679 - Exonic hg19 STAD TCGA-CD-8525-01A 4 5 In-Frame Intra-chr q23.2 Seq+ 47746 ChimerSeq STARFusion TCGA_RNA-Seq MBOAT1-TDRD12 MBOAT1 chr6 20131375 - TDRD12 chr19 33247944 + Exonic hg19 STAD TCGA-CD-8525-01A 4 4 In-Frame Inter-chr p22.3 q13.11 47747 ChimerSeq STARFusion TCGA_RNA-Seq OVOL2-MROH8 OVOL2 chr20 18005243 - MROH8 chr20 35743740 - Exonic hg19 STAD TCGA-CD-8525-01A 4 1 Out-of-frame Intra-chr p11.23 Transcription factor q11.23 47748 ChimerSeq STARFusion TCGA_RNA-Seq EIF3C-MAGI1 EIF3C chr16 28746906 + MAGI1 chr3 65346054 - Exonic hg19 STAD TCGA-CD-8525-01A 4 0 Out-of-frame Inter-chr p11.2 Oncogene 47749 ChimerSeq STARFusion TCGA_RNA-Seq PAPSS2-ATAD1 PAPSS2 chr10 89419765 + ATAD1 chr10 89519544 - Exonic hg19 STAD TCGA-CD-8525-01A 2 5 Out-of-frame Intra-chr q23.2 Seq+ 47750 ChimerSeq STARFusion TCGA_RNA-Seq ARF3-SMURF1 ARF3 chr12 49332573 - SMURF1 chr7 98626226 - Exonic hg19 STAD TCGA-CD-8525-01A 3 0 Out-of-frame Inter-chr q13.12 47751 ChimerSeq STARFusion TCGA_RNA-Seq CHD6-UBB CHD6 chr20 40111949 - UBB chr17 16285216 + Exonic hg19 STAD TCGA-CD-8525-01A 3 0 CDS-5'UTR Inter-chr q12 p11.2 47752 ChimerSeq STARFusion TCGA_RNA-Seq FAM60A-TPGS1 FAM60A chr12 31478958 - TPGS1 chr19 518889 + Exonic hg19 STAD TCGA-CD-8525-01A 3 0 5'UTR-CDS Inter-chr p13.3 47753 ChimerSeq STARFusion TCGA_RNA-Seq PSMA7-ARHGAP30 PSMA7 chr20 60713234 - ARHGAP30 chr1 161018934 - Exonic hg19 STAD TCGA-CD-8525-01A 3 0 Out-of-frame Inter-chr q13.33 q23.3 47754 ChimerSeq STARFusion TCGA_RNA-Seq RPA1-CXCL3 RPA1 chr17 1801298 + CXCL3 chr4 74902922 - Exonic hg19 STAD TCGA-CD-8525-01A 3 0 Out-of-frame Inter-chr p13.3 Tumor suppressor gene q13.3 47755 ChimerSeq STARFusion TCGA_RNA-Seq RPL37-ATP5E RPL37 chr5 40834624 - ATP5E chr20 57603868 - Exonic hg19 STAD TCGA-CD-8525-01A 3 0 Out-of-frame Inter-chr p13.1 q13.32 47756 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A51-RBM3 SLC25A51 chr9 37880664 - RBM3 chrX 48436377 + Exonic hg19 STAD TCGA-CD-8525-01A 3 0 Out-of-frame Inter-chr p13.1 p11.23 47757 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D22A-CLK3 TBC1D22A chr22 47193517 + CLK3 chr15 74914835 + Exonic hg19 STAD TCGA-CD-8525-01A 3 0 In-Frame Inter-chr q13.31 q24.1 CMGC:CLK 47758 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R2-TMC2 PPP1R2 chr3 195251617 - TMC2 chr20 2559792 + Exonic hg19 STAD TCGA-CD-8525-01A 2 2 Out-of-frame Inter-chr q29 p13 47759 ChimerSeq STARFusion TCGA_RNA-Seq WDR59-CFDP1 WDR59 chr16 74972048 - CFDP1 chr16 75339080 - Exonic hg19 STAD TCGA-CD-8525-01A 2 2 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 47760 ChimerSeq STARFusion TCGA_RNA-Seq NAA60-TNFRSF12A NAA60 chr16 3508181 + TNFRSF12A chr16 3071556 + Exonic hg19 STAD TCGA-CD-8525-01A 2 1 5'UTR-CDS Intra-chr p13.3 p13.3 Tumor suppressor gene 47761 ChimerSeq STARFusion TCGA_RNA-Seq NAA60-TNFRSF12A NAA60 chr16 3508181 + TNFRSF12A chr16 3071556 + Exonic hg19 STAD TCGA-CD-8525-01A 2 1 5'UTR-CDS Intra-chr p13.3 p13.3 Tumor suppressor gene 47762 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS17-PCSK6 ADAMTS17 chr15 100871094 - PCSK6 chr15 101872236 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 In-Frame Intra-chr q26.3 q26.3 47763 ChimerSeq STARFusion TCGA_RNA-Seq ADAP1-MICALL2 ADAP1 chr7 959605 - MICALL2 chr7 1489924 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 Out-of-frame Intra-chr p22.3 p22.3 47764 ChimerSeq STARFusion TCGA_RNA-Seq ANXA7-ABI1 ANXA7 chr10 75173770 - ABI1 chr10 27066170 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 5'UTR-CDS Intra-chr q22.2 Tumor suppressor gene p12.1 47765 ChimerSeq STARFusion TCGA_RNA-Seq APP-ABI1 APP chr21 27542882 - ABI1 chr10 27066170 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 In-Frame Inter-chr q21.3 p12.1 47766 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF12-KPNA1 ARHGEF12 chr11 120308091 + KPNA1 chr3 122156142 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 In-Frame Inter-chr q23.3 Tumor suppressor gene q21.1 47767 ChimerSeq STARFusion TCGA_RNA-Seq ASH1L-IFI16 ASH1L chr1 155531944 - IFI16 chr1 159002314 + Exonic hg19 STAD TCGA-CD-8525-01A 2 0 5'UTR-CDS Intra-chr q22 Transcription factor q23.1 Tumor suppressor gene 47768 ChimerSeq STARFusion TCGA_RNA-Seq AVL9-OXNAD1 AVL9 chr7 32535414 + OXNAD1 chr3 16327849 + Exonic hg19 STAD TCGA-CD-8525-01A 2 0 In-Frame Inter-chr p14.3 p25.1 47769 ChimerSeq STARFusion TCGA_RNA-Seq BCAM-MRPL9 BCAM chr19 45315805 + MRPL9 chr1 151734028 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 In-Frame Inter-chr q13.32 q21.3 47770 ChimerSeq STARFusion TCGA_RNA-Seq C16orf59-PHB2 C16orf59 chr16 2512240 + PHB2 chr12 7076401 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 In-Frame Inter-chr p13.3 p13.31 47771 ChimerSeq STARFusion TCGA_RNA-Seq CARKD-ABCC4 CARKD chr13 111267994 + ABCC4 chr13 95768255 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 In-Frame Intra-chr q32.1 47772 ChimerSeq STARFusion TCGA_RNA-Seq CDK5RAP1-HNRNPLL CDK5RAP1 chr20 31989234 - HNRNPLL chr2 38813023 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 Out-of-frame Inter-chr q11.21 p22.1 47773 ChimerSeq STARFusion TCGA_RNA-Seq CLCN3-SFPQ CLCN3 chr4 170542214 + SFPQ chr1 35643637 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 5'UTR-3'UTR Inter-chr q33 p34.3 47774 ChimerSeq STARFusion TCGA_RNA-Seq COX19-MICALL2 COX19 chr7 959605 - MICALL2 chr7 1489924 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 3'UTR-CDS Intra-chr p22.3 p22.3 47775 ChimerSeq STARFusion TCGA_RNA-Seq DNAH3-SDF2 DNAH3 chr16 21030946 - SDF2 chr17 26982501 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 In-Frame Inter-chr p12.3 q11.2 47776 ChimerSeq STARFusion TCGA_RNA-Seq DPM1-CDKN2A DPM1 chr20 49574900 - CDKN2A chr9 21968241 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 Out-of-frame Inter-chr q13.13 p21.3 Oncogene Tumor suppressor gene 47777 ChimerSeq STARFusion TCGA_RNA-Seq FANCL-VRK2 FANCL chr2 58425729 - VRK2 chr2 58350236 + Exonic hg19 STAD TCGA-CD-8525-01A 2 0 In-Frame Intra-chr p16.1 p16.1 CK1:VRK 47778 ChimerSeq STARFusion TCGA_RNA-Seq FKBP14-DAP FKBP14 chr7 30062281 - DAP chr5 10748383 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 In-Frame Inter-chr p14.3 p15.2 47779 ChimerSeq STARFusion TCGA_RNA-Seq GSS-FAM192A GSS chr20 33543530 - FAM192A chr16 57207781 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 5'UTR-5'UTR Inter-chr q11.22 q13 47780 ChimerSeq STARFusion TCGA_RNA-Seq HAT1-TOMM7 HAT1 chr2 172782151 + TOMM7 chr7 22857667 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 In-Frame Inter-chr q31.1 p15.3 47781 ChimerSeq STARFusion TCGA_RNA-Seq HIF1A-SLC38A6 HIF1A chr14 62162557 + SLC38A6 chr14 61545548 + Exonic hg19 STAD TCGA-CD-8525-01A 2 0 Out-of-frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 47782 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPA2B1-ATG5 HNRNPA2B1 chr7 26240192 - ATG5 chr6 106649964 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 In-Frame Inter-chr p15.2 q21 47783 ChimerSeq STARFusion TCGA_RNA-Seq IFI44L-RPL5 IFI44L chr1 79086256 + RPL5 chr1 93307323 + Exonic hg19 STAD TCGA-CD-8525-01A 2 0 5'UTR-CDS Intra-chr p31.1 p22.1 Tumor suppressor gene 47784 ChimerSeq STARFusion TCGA_RNA-Seq IGF2R-CD44 IGF2R chr6 160412355 + CD44 chr11 35222629 + Exonic hg19 STAD TCGA-CD-8525-01A 2 0 In-Frame Inter-chr q25.3 Oncogene Tumor suppressor gene p13 Oncogene Tumor suppressor gene 47785 ChimerSeq STARFusion TCGA_RNA-Seq IQCB1-FKBP3 IQCB1 chr3 121544898 - FKBP3 chr14 45600003 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 In-Frame Inter-chr q13.33 q21.2 47786 ChimerSeq STARFusion TCGA_RNA-Seq KIF11-GRB14 KIF11 chr10 94397302 + GRB14 chr2 165358845 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 In-Frame Inter-chr q23.33 q24.3 47787 ChimerSeq STARFusion TCGA_RNA-Seq LINC00032-IFT74 LINC00032 chr9 27277549 - IFT74 chr9 27009018 + Exonic hg19 STAD TCGA-CD-8525-01A 2 0 3'UTR-CDS Intra-chr p21.2 p21.2 47788 ChimerSeq STARFusion TCGA_RNA-Seq NQO1-SPIN3 NQO1 chr16 69752273 - SPIN3 chrX 57021382 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 CDS-5'UTR Inter-chr q22.1 p11.21 47789 ChimerSeq STARFusion TCGA_RNA-Seq NUP210-PABPC1 NUP210 chr3 13393379 - PABPC1 chr8 101715587 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 CDS-3'UTR Inter-chr p25.1 q22.3 47790 ChimerSeq STARFusion TCGA_RNA-Seq OCLN-TAF9 OCLN chr5 68788727 + TAF9 chr5 68662422 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 5'UTR-5'UTR Intra-chr q13.2 47791 ChimerSeq STARFusion TCGA_RNA-Seq OGFOD2-RPS25 OGFOD2 chr12 123459930 + RPS25 chr11 118888255 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 5'UTR-CDS Inter-chr q24.31 47792 ChimerSeq STARFusion TCGA_RNA-Seq PDCD11-USMG5 PDCD11 chr10 105158285 + USMG5 chr10 105148923 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 CDS-3'UTR Intra-chr q24.33 q24.33 47793 ChimerSeq STARFusion TCGA_RNA-Seq PHACTR4-TRNAU1AP PHACTR4 chr1 28696336 + TRNAU1AP chr1 28897688 + Exonic hg19 STAD TCGA-CD-8525-01A 2 0 5'UTR-5'UTR Intra-chr p35.3 Tumor suppressor gene p35.3 Seq+ 47794 ChimerSeq STARFusion TCGA_RNA-Seq PIM3-RPS21 PIM3 chr22 50355016 + RPS21 chr20 60962377 + Exonic hg19 STAD TCGA-CD-8525-01A 2 0 CDS-3'UTR Inter-chr q13.33 CAMK:PIM q13.33 47795 ChimerSeq STARFusion TCGA_RNA-Seq PKN1-GNAS PKN1 chr19 14557373 + GNAS chr20 57470667 + Exonic hg19 STAD TCGA-CD-8525-01A 2 0 In-Frame Inter-chr p13.12 AGC:PKN q13.32 Oncogene 47796 ChimerSeq STARFusion TCGA_RNA-Seq PRKAR2A-IP6K2 PRKAR2A chr3 48845082 - IP6K2 chr3 48732854 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 Out-of-frame Intra-chr p21.31 p21.31 47797 ChimerSeq STARFusion TCGA_RNA-Seq PTRH2-EXOC4 PTRH2 chr17 57784732 - EXOC4 chr7 133622644 + Exonic hg19 STAD TCGA-CD-8525-01A 2 0 5'UTR-CDS Inter-chr q23.1 q33 47798 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-EP300 PVT1 chr8 128903244 + EP300 chr22 41513191 + Exonic hg19 STAD TCGA-CD-8525-01A 2 0 5'UTR-CDS Inter-chr q24.21 q13.2 Oncogene 47799 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM1-STK24 R3HDM1 chr2 136380302 + STK24 chr13 99118815 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 Out-of-frame Inter-chr q21.3 q32.2 47800 ChimerSeq STARFusion TCGA_RNA-Seq RHBDD2-ZRSR2 RHBDD2 chr7 75508578 + ZRSR2 chrX 15840854 + Exonic hg19 STAD TCGA-CD-8525-01A 2 0 In-Frame Inter-chr q11.23 p22.2 47801 ChimerSeq STARFusion TCGA_RNA-Seq RPS29-TRIP12 RPS29 chr14 50052668 - TRIP12 chr2 230650571 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 In-Frame Inter-chr q21.3 q36.3 47802 ChimerSeq STARFusion TCGA_RNA-Seq SEC22C-OMA1 SEC22C chr3 42623685 - OMA1 chr1 59004982 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 5'UTR-5'UTR Inter-chr p22.1 p32.1 47803 ChimerSeq STARFusion TCGA_RNA-Seq SEC22C-SETD2 SEC22C chr3 42610357 - SETD2 chr3 47079267 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 In-Frame Intra-chr p22.1 p21.31 Oncogene Tumor suppressor gene 47804 ChimerSeq STARFusion TCGA_RNA-Seq SGMS1-GIGYF2 SGMS1 chr10 52349913 - GIGYF2 chr2 233655718 + Exonic hg19 STAD TCGA-CD-8525-01A 2 0 5'UTR-CDS Inter-chr q11.23 Tumor suppressor gene q37.1 47805 ChimerSeq STARFusion TCGA_RNA-Seq SH3BGRL-DIAPH2 SH3BGRL chrX 80457744 + DIAPH2 chrX 96354693 + Exonic hg19 STAD TCGA-CD-8525-01A 2 0 In-Frame Intra-chr q21.1 q21.33 47806 ChimerSeq STARFusion TCGA_RNA-Seq SH3D19-FUS SH3D19 chr4 152095822 - FUS chr16 31199646 + Exonic hg19 STAD TCGA-CD-8525-01A 2 0 In-Frame Inter-chr q31.3 p11.2 Tumor suppressor gene Seq+ 47807 ChimerSeq STARFusion TCGA_RNA-Seq SLC35E2-GNB1 SLC35E2 chr1 1666129 - GNB1 chr1 1756938 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 CDS-5'UTR Intra-chr p36.33 p36.33 Seq+ 47808 ChimerSeq STARFusion TCGA_RNA-Seq SNCAIP-COMMD10 SNCAIP chr5 121726886 + COMMD10 chr5 115469765 + Exonic hg19 STAD TCGA-CD-8525-01A 2 0 In-Frame Intra-chr q23.2 q23.1 47809 ChimerSeq STARFusion TCGA_RNA-Seq TCF3-SGTA TCF3 chr19 1652299 - SGTA chr19 2769089 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 5'UTR-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p13.3 47810 ChimerSeq STARFusion TCGA_RNA-Seq TIAM1-UBE2G2 TIAM1 chr21 32931240 - UBE2G2 chr21 46208010 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 5'UTR-5'UTR Intra-chr q22.11 q22.3 47811 ChimerSeq STARFusion TCGA_RNA-Seq TRIP12-PSMD1 TRIP12 chr2 230705538 - PSMD1 chr2 232010954 + Exonic hg19 STAD TCGA-CD-8525-01A 2 0 Out-of-frame Intra-chr q36.3 q37.1 47812 ChimerSeq STARFusion TCGA_RNA-Seq USP31-GNAS USP31 chr16 23159959 - GNAS chr20 57470667 + Exonic hg19 STAD TCGA-CD-8525-01A 2 0 Out-of-frame Inter-chr p12.2 q13.32 Oncogene 47813 ChimerSeq STARFusion TCGA_RNA-Seq VAPA-GDAP2 VAPA chr18 9914332 + GDAP2 chr1 118413238 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 Out-of-frame Inter-chr p11.22 p12 47814 ChimerSeq STARFusion TCGA_RNA-Seq VNN3-MYO1D VNN3 chr6 133055392 - MYO1D chr17 30821933 - Exonic hg19 STAD TCGA-CD-8525-01A 2 0 3'UTR-CDS Inter-chr q23.2 q11.2 47815 ChimerSeq STARFusion TCGA_RNA-Seq VTA1-AIG1 VTA1 chr6 142468536 + AIG1 chr6 143605247 + Exonic hg19 STAD TCGA-CD-8525-01A 2 0 Out-of-frame Intra-chr q24.1 q24.2 47816 ChimerSeq STARFusion TCGA_RNA-Seq WDR33-BACE2 WDR33 chr2 128520636 - BACE2 chr21 42647298 + Exonic hg19 STAD TCGA-CD-8525-01A 2 0 In-Frame Inter-chr q14.3 q22.2 47817 ChimerSeq STARFusion TCGA_RNA-Seq ZNF727-BCCIP ZNF727 chr7 63506002 + BCCIP chr10 127519989 + Exonic hg19 STAD TCGA-CD-8525-01A 2 0 In-Frame Inter-chr q11.21 Transcription factor q26.2 47818 ChimerSeq STARFusion TCGA_RNA-Seq PNKD-IGHG3 PNKD chr2 219135283 + IGHG3 chr14 106330843 - Exonic hg19 STAD TCGA-BR-6566-01A 28 0 Out-of-frame Inter-chr q35 47819 ChimerSeq STARFusion TCGA_RNA-Seq PNKD-IGHJ3 PNKD chr2 219135283 + IGHJ3 chr14 106330843 - Exonic hg19 STAD TCGA-BR-6566-01A 28 0 Out-of-frame Inter-chr q35 q32.33 47820 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-FOSL1P1 IGH@ chr14 106518406 - FOSL1P1 chr4 129076987 + Exonic hg19 STAD TCGA-BR-6566-01A 17 0 Out-of-frame Inter-chr 32.33 q28.2 47821 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-FOSL1P1 IGH@ chr14 106471252 - FOSL1P1 chr4 129076987 + Exonic hg19 STAD TCGA-BR-6566-01A 15 0 Out-of-frame Inter-chr 32.33 q28.2 47822 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-FOSL1P1 IGH@ chr14 106573239 - FOSL1P1 chr4 129076987 + Exonic hg19 STAD TCGA-BR-6566-01A 13 0 Out-of-frame Inter-chr 32.33 q28.2 47823 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 STAD TCGA-BR-6566-01A 12 0 Out-of-frame Inter-chr q13.33 p21.1 47824 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN3-ELF1 TSPAN3 chr15 77363234 - ELF1 chr13 41533152 - Exonic hg19 STAD TCGA-BR-4371-01A 2 0 In-Frame Inter-chr q24.3 q14.11 Transcription factor 47825 ChimerSeq STARFusion TCGA_RNA-Seq KDM5A-NINJ2 KDM5A chr12 404739 - NINJ2 chr12 675344 - Exonic hg19 STAD TCGA-BR-8295-01A 114 21 In-Frame Intra-chr p13.33 Tumor suppressor gene p13.33 Seq+ 47826 ChimerSeq STARFusion TCGA_RNA-Seq PACSIN2-LGALS1 PACSIN2 chr22 43272143 - LGALS1 chr22 38072993 + Exonic hg19 STAD TCGA-BR-8295-01A 14 6 Out-of-frame Intra-chr q13.2 q13.1 Seq+ 47827 ChimerSeq STARFusion TCGA_RNA-Seq CTNNA1-SCUBE1 CTNNA1 chr5 138089199 + SCUBE1 chr22 43617295 - Exonic hg19 STAD TCGA-BR-8295-01A 7 10 5'UTR-CDS Inter-chr q31.2 Oncogene q13.2 Seq+ 47828 ChimerSeq STARFusion TCGA_RNA-Seq KCNH2-SMARCD3 KCNH2 chr7 150671799 - SMARCD3 chr7 150942757 - Exonic hg19 STAD TCGA-BR-8295-01A 5 1 Out-of-frame Intra-chr q36.1 q36.1 47829 ChimerSeq STARFusion TCGA_RNA-Seq CTNNA1-SCUBE1 CTNNA1 chr5 138090852 + SCUBE1 chr22 43617295 - Exonic hg19 STAD TCGA-BR-8295-01A 2 10 5'UTR-CDS Inter-chr q31.2 Oncogene q13.2 Seq+ 47830 ChimerSeq STARFusion TCGA_RNA-Seq GNA11-TLE6 GNA11 chr19 3113482 + TLE6 chr19 2991841 + Exonic hg19 STAD TCGA-BR-8295-01A 3 4 In-Frame Intra-chr p13.3 Oncogene p13.3 47831 ChimerSeq STARFusion TCGA_RNA-Seq SEPT11-SHROOM3 SEPT11 chr4 77952123 + SHROOM3 chr4 77651957 + Exonic hg19 STAD TCGA-BR-8295-01A 3 1 In-Frame Intra-chr q21.1 q21.1 47832 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-SPINK8 MAP4 chr3 48019355 - SPINK8 chr3 48351436 - Exonic hg19 STAD TCGA-BR-8295-01A 3 0 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 47833 ChimerSeq STARFusion TCGA_RNA-Seq RELB-TNFRSF8 RELB chr19 45504943 + TNFRSF8 chr1 12175634 + Exonic hg19 STAD TCGA-BR-8295-01A 3 0 CDS-3'UTR Inter-chr q13.32 Transcription factor p36.22 47834 ChimerSeq STARFusion TCGA_RNA-Seq VCX2-MYRF VCX2 chrX 8138081 - MYRF chr11 61546848 + Exonic hg19 STAD TCGA-BR-8295-01A 3 0 Out-of-frame Inter-chr p22.31 q12.2 Transcription factor 47835 ChimerSeq STARFusion TCGA_RNA-Seq ZNF595-WHSC1L1 ZNF595 chr4 60046 + WHSC1L1 chr8 38205661 - Exonic hg19 STAD TCGA-BR-8295-01A 3 0 In-Frame Inter-chr p16.3 Transcription factor p11.23 Tumor suppressor gene 47836 ChimerSeq STARFusion TCGA_RNA-Seq ACSF2-HSF5 ACSF2 chr17 48503750 + HSF5 chr17 56499791 - Exonic hg19 STAD TCGA-BR-8295-01A 2 0 Out-of-frame Intra-chr q21.33 q22 Transcription factor 47837 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP8-MEIS1 ARHGAP8 chr22 45241222 + MEIS1 chr2 66664869 + Exonic hg19 STAD TCGA-BR-8295-01A 2 0 Out-of-frame Inter-chr q13.31 p14 Transcription factor 47838 ChimerSeq STARFusion TCGA_RNA-Seq ATL2-DCTN1 ATL2 chr2 38570410 - DCTN1 chr2 74605372 - Exonic hg19 STAD TCGA-BR-8295-01A 2 0 In-Frame Intra-chr p22.1 p13.1 47839 ChimerSeq STARFusion TCGA_RNA-Seq ATP5J2-IGF2BP3 ATP5J2 chr7 99063752 - IGF2BP3 chr7 23391205 - Exonic hg19 STAD TCGA-BR-8295-01A 2 0 Out-of-frame Intra-chr q22.1 p15.3 47840 ChimerSeq STARFusion TCGA_RNA-Seq ATR-U2SURP ATR chr3 142284963 - U2SURP chr3 142751626 + Exonic hg19 STAD TCGA-BR-8295-01A 2 0 3'UTR-CDS Intra-chr q23 Atypical:PIKK Oncogene Tumor suppressor gene q23 Seq+ 47841 ChimerSeq STARFusion TCGA_RNA-Seq C3orf14-SON C3orf14 chr3 62307728 + SON chr21 34931536 + Exonic hg19 STAD TCGA-BR-8295-01A 2 0 In-Frame Inter-chr p14.2 q22.11 Transcription factor 47842 ChimerSeq STARFusion TCGA_RNA-Seq CCNT2-ZER1 CCNT2 chr2 135677461 + ZER1 chr9 131505024 - Exonic hg19 STAD TCGA-BR-8295-01A 2 0 In-Frame Inter-chr q21.3 q34.11 47843 ChimerSeq STARFusion TCGA_RNA-Seq CDK11A-TAF6 CDK11A chr1 1650797 - TAF6 chr7 99711891 - Exonic hg19 STAD TCGA-BR-8295-01A 2 0 In-Frame Inter-chr p36.33 q22.1 47844 ChimerSeq STARFusion TCGA_RNA-Seq DSCR4-KCNJ6 DSCR4 chr21 39492401 - KCNJ6 chr21 39213011 - Exonic hg19 STAD TCGA-BR-8295-01A 2 0 CDS-5'UTR Intra-chr q22.13 q22.13 47845 ChimerSeq STARFusion TCGA_RNA-Seq GET4-SUN1 GET4 chr7 916437 + SUN1 chr7 908986 + Exonic hg19 STAD TCGA-BR-8295-01A 2 0 Out-of-frame Intra-chr p22.3 p22.3 47846 ChimerSeq STARFusion TCGA_RNA-Seq GLB1L3-FAM120A GLB1L3 chr11 134163103 + FAM120A chr9 96323391 + Exonic hg19 STAD TCGA-BR-8295-01A 2 0 Out-of-frame Inter-chr q25 q22.31 47847 ChimerSeq STARFusion TCGA_RNA-Seq GPR108-KANK3 GPR108 chr19 6735633 - KANK3 chr19 8387806 - Exonic hg19 STAD TCGA-BR-8295-01A 2 0 Out-of-frame Intra-chr p13.3 p13.2 47848 ChimerSeq STARFusion TCGA_RNA-Seq HERC3-CISD2 HERC3 chr4 89527200 + CISD2 chr4 103806373 + Exonic hg19 STAD TCGA-BR-8295-01A 2 0 In-Frame Intra-chr q22.1 q24 47849 ChimerSeq STARFusion TCGA_RNA-Seq HMGN1-THOC6 HMGN1 chr21 40719305 - THOC6 chr16 3074194 + Exonic hg19 STAD TCGA-BR-8295-01A 2 0 Out-of-frame Inter-chr q22.2 p13.3 47850 ChimerSeq STARFusion TCGA_RNA-Seq IFNAR1-MRPS6 IFNAR1 chr21 34707953 + MRPS6 chr21 35497641 + Exonic hg19 STAD TCGA-BR-8295-01A 2 0 Out-of-frame Intra-chr q22.11 q22.11 47851 ChimerSeq STARFusion TCGA_RNA-Seq ITGB3BP-ZCCHC11 ITGB3BP chr1 63988800 - ZCCHC11 chr1 52891179 - Exonic hg19 STAD TCGA-BR-8295-01A 2 0 Out-of-frame Intra-chr p31.3 p32.3 47852 ChimerSeq STARFusion TCGA_RNA-Seq KCMF1-ASXL1 KCMF1 chr2 85198590 + ASXL1 chr20 30954187 + Exonic hg19 STAD TCGA-BR-8295-01A 2 0 Out-of-frame Inter-chr p11.2 Transcription factor q11.21 Oncogene Tumor suppressor gene 47853 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1217-COX7A2 KIAA1217 chr10 24834032 + COX7A2 chr6 75950981 - Exonic hg19 STAD TCGA-BR-8295-01A 2 0 In-Frame Inter-chr p12.2 q14.1 47854 ChimerSeq STARFusion TCGA_RNA-Seq MTERFD2-TDP1 MTERFD2 chr2 242041668 - TDP1 chr14 90485660 + Exonic hg19 STAD TCGA-BR-8295-01A 2 0 Out-of-frame Inter-chr q32.11 47855 ChimerSeq STARFusion TCGA_RNA-Seq PAQR3-RUNX1 PAQR3 chr4 79836364 - RUNX1 chr21 36164907 - Exonic hg19 STAD TCGA-BR-8295-01A 2 0 3'UTR-CDS Inter-chr q21.21 q22.12 Oncogene Tumor suppressor gene Transcription factor 47856 ChimerSeq STARFusion TCGA_RNA-Seq PRKDC-TOMM70A PRKDC chr8 48868434 - TOMM70A chr3 100092489 - Exonic hg19 STAD TCGA-BR-8295-01A 2 0 In-Frame Inter-chr q11.21 Oncogene 47857 ChimerSeq STARFusion TCGA_RNA-Seq PTCD1-IGF2BP3 PTCD1 chr7 99063752 - IGF2BP3 chr7 23391205 - Exonic hg19 STAD TCGA-BR-8295-01A 2 0 5'UTR-CDS Intra-chr q22.1 p15.3 47858 ChimerSeq STARFusion TCGA_RNA-Seq RBBP7-UBE2G2 RBBP7 chrX 16863151 - UBE2G2 chr21 46193602 - Exonic hg19 STAD TCGA-BR-8295-01A 2 0 3'UTR-CDS Inter-chr p22.2 Tumor suppressor gene q22.3 47859 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-EEF1D RCC1 chr1 28832596 + EEF1D chr8 144669022 - Exonic hg19 STAD TCGA-BR-8295-01A 2 0 5'UTR-5'UTR Inter-chr p35.3 Seq+ 47860 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-MRPS21 RCC1 chr1 28834672 + MRPS21 chr1 150280482 + Exonic hg19 STAD TCGA-BR-8295-01A 2 0 5'UTR-CDS Intra-chr p35.3 q21.2 47861 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-NDUFB5 RCC1 chr1 28834672 + NDUFB5 chr3 179333771 + Exonic hg19 STAD TCGA-BR-8295-01A 2 0 5'UTR-CDS Inter-chr p35.3 q26.33 47862 ChimerSeq STARFusion TCGA_RNA-Seq RHOA-BAGE2 RHOA chr3 49449253 - BAGE2 chr21 11058323 - Exonic hg19 STAD TCGA-BR-8295-01A 2 0 5'UTR-CDS Inter-chr p21.31 Oncogene Tumor suppressor gene p11.2 47863 ChimerSeq STARFusion TCGA_RNA-Seq ROR2-VPS8 ROR2 chr9 94712149 - VPS8 chr3 184533572 + Exonic hg19 STAD TCGA-BR-8295-01A 2 0 CDS-5'UTR Inter-chr q22.31 TK:Ror Tumor suppressor gene q27.2 47864 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-EEF1D SNHG3 chr1 28832596 + EEF1D chr8 144669022 - Exonic hg19 STAD TCGA-BR-8295-01A 2 0 5'UTR-5'UTR Inter-chr p35.3 47865 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-MRPS21 SNHG3 chr1 28834672 + MRPS21 chr1 150280482 + Exonic hg19 STAD TCGA-BR-8295-01A 2 0 5'UTR-CDS Intra-chr p35.3 q21.2 47866 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-NDUFB5 SNHG3 chr1 28834672 + NDUFB5 chr3 179333771 + Exonic hg19 STAD TCGA-BR-8295-01A 2 0 5'UTR-CDS Inter-chr p35.3 q26.33 47867 ChimerSeq STARFusion TCGA_RNA-Seq SPPL2B-SNHG7 SPPL2B chr19 2337624 + SNHG7 chr9 139619562 - Exonic hg19 STAD TCGA-BR-8295-01A 2 0 CDS-3'UTR Inter-chr p13.3 q34.3 47868 ChimerSeq STARFusion TCGA_RNA-Seq TMLHE-ME2 TMLHE chrX 154842453 - ME2 chr18 48458628 + Exonic hg19 STAD TCGA-BR-8295-01A 2 0 5'UTR-CDS Inter-chr q28 q21.2 47869 ChimerSeq STARFusion TCGA_RNA-Seq TOP2A-GNPAT TOP2A chr17 38545768 - GNPAT chr1 231410967 + Exonic hg19 STAD TCGA-BR-8295-01A 2 0 3'UTR-CDS Inter-chr q21.2 q42.2 47870 ChimerSeq STARFusion TCGA_RNA-Seq UBXN2A-CT45A4 UBXN2A chr2 24150485 + CT45A4 chrX 134950252 - Exonic hg19 STAD TCGA-BR-8295-01A 2 0 Out-of-frame Inter-chr p23.3 47871 ChimerSeq STARFusion TCGA_RNA-Seq UBXN2A-CT45A5 UBXN2A chr2 24150485 + CT45A5 chrX 134950252 - Exonic hg19 STAD TCGA-BR-8295-01A 2 0 5'UTR-5'UTR Inter-chr p23.3 q26.3 47872 ChimerSeq STARFusion TCGA_RNA-Seq TMEM179B-RSF1 TMEM179B chr11 62554999 + RSF1 chr11 77413540 - Exonic hg19 STAD TCGA-VQ-A8PU-01A 46 7 Out-of-frame Intra-chr q12.3 q14.1 Seq+ 47873 ChimerSeq STARFusion TCGA_RNA-Seq TMEM179B-RSF1 TMEM179B chr11 62556898 + RSF1 chr11 77413540 - Exonic hg19 STAD TCGA-VQ-A8PU-01A 5 7 Out-of-frame Intra-chr q12.3 q14.1 Seq+ 47874 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL1-IFI6 RN7SL1 chr14 50053530 + IFI6 chr1 27992763 - Exonic hg19 STAD TCGA-BR-8677-01A 7 9 Out-of-frame Inter-chr q21.3 p35.3 47875 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHM2-LINC00920 PLEKHM2 chr1 16011113 + LINC00920 chr16 66444183 + Exonic hg19 STAD TCGA-BR-8677-01A 6 9 Out-of-frame Inter-chr p36.21 q21 47876 ChimerSeq STARFusion TCGA_RNA-Seq ARID3A-TEX38 ARID3A chr19 960164 + TEX38 chr1 47138696 + Exonic hg19 STAD TCGA-BR-8677-01A 7 4 Out-of-frame Inter-chr p13.3 Transcription factor p33 Seq+ 47877 ChimerSeq STARFusion TCGA_RNA-Seq ARID3A-TEX38 ARID3A chr19 960164 + TEX38 chr1 47138624 + Exonic hg19 STAD TCGA-BR-8677-01A 3 4 Out-of-frame Inter-chr p13.3 Transcription factor p33 Seq+ 47878 ChimerSeq STARFusion TCGA_RNA-Seq ARID3A-TEX38 ARID3A chr19 960164 + TEX38 chr1 47138545 + Exonic hg19 STAD TCGA-BR-8677-01A 3 4 Out-of-frame Inter-chr p13.3 Transcription factor p33 Seq+ 47879 ChimerSeq STARFusion TCGA_RNA-Seq C4orf19-TBC1D1 C4orf19 chr4 37559698 + TBC1D1 chr4 38037209 + Exonic hg19 STAD TCGA-BR-8677-01A 3 3 5'UTR-CDS Intra-chr p14 p14 Seq+ 47880 ChimerSeq STARFusion TCGA_RNA-Seq ROCK1-ANKRD29 ROCK1 chr18 18690779 - ANKRD29 chr18 21229157 - Exonic hg19 STAD TCGA-BR-8677-01A 2 7 In-Frame Intra-chr q11.1 AGC:DMPK q11.2 Seq+ 47881 ChimerSeq STARFusion TCGA_RNA-Seq USP39-TCF7L1 USP39 chr2 85846412 + TCF7L1 chr2 85536996 + Exonic hg19 STAD TCGA-BR-7716-01A 311 69 CDS-3'UTR Intra-chr p11.2 p11.2 Oncogene Transcription factor 47882 ChimerSeq STARFusion TCGA_RNA-Seq MET-CAV1 MET chr7 116340338 + CAV1 chr7 116199000 + Exonic hg19 STAD TCGA-BR-7716-01A 171 19 In-Frame Intra-chr q31.2 TK:Met Oncogene q31.2 Tumor suppressor gene Seq+ 47883 ChimerSeq STARFusion TCGA_RNA-Seq TOMM20-EPHB2 TOMM20 chr1 235291910 - EPHB2 chr1 23208852 + Exonic hg19 STAD TCGA-BR-7716-01A 165 18 In-Frame Intra-chr q42.3 p36.12 Tumor suppressor gene Seq+ 47884 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-ATG4D DNM2 chr19 10897382 + ATG4D chr19 10662573 + Exonic hg19 STAD TCGA-BR-7716-01A 117 21 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 47885 ChimerSeq STARFusion TCGA_RNA-Seq USP39-TCF7L1 USP39 chr2 85846412 + TCF7L1 chr2 85536845 + Exonic hg19 STAD TCGA-BR-7716-01A 60 66 CDS-3'UTR Intra-chr p11.2 p11.2 Oncogene Transcription factor 47886 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF1-WDR83 RAPGEF1 chr9 134615157 - WDR83 chr19 12783661 + Exonic hg19 STAD TCGA-BR-7716-01A 68 17 5'UTR-5'UTR Inter-chr q34.13 p13.13 Seq+ 47887 ChimerSeq STARFusion TCGA_RNA-Seq USP39-TCF7L1 USP39 chr2 85846412 + TCF7L1 chr2 85536944 + Exonic hg19 STAD TCGA-BR-7716-01A 53 66 CDS-3'UTR Intra-chr p11.2 p11.2 Oncogene Transcription factor 47888 ChimerSeq STARFusion TCGA_RNA-Seq LMBR1-LINC01006 LMBR1 chr7 156549087 - LINC01006 chr7 156265405 - Exonic hg19 STAD TCGA-BR-7716-01A 59 15 Out-of-frame Intra-chr q36.3 q36.3 47889 ChimerSeq STARFusion TCGA_RNA-Seq TTC19-PIGL TTC19 chr17 15909882 + PIGL chr17 16137285 + Exonic hg19 STAD TCGA-BR-7716-01A 55 5 In-Frame Intra-chr p12 p11.2 47890 ChimerSeq STARFusion TCGA_RNA-Seq WDR20-DYNC1H1 WDR20 chr14 102606509 + DYNC1H1 chr14 102514154 + Exonic hg19 STAD TCGA-BR-7716-01A 45 12 Out-of-frame Intra-chr q32.31 q32.31 Seq+ 47891 ChimerSeq STARFusion TCGA_RNA-Seq SVIL-TAF3 SVIL chr10 29946898 - TAF3 chr10 8005883 + Exonic hg19 STAD TCGA-BR-7716-01A 39 7 5'UTR-CDS Intra-chr p11.23 p14 Seq+ 47892 ChimerSeq STARFusion TCGA_RNA-Seq RBM6-RNF123 RBM6 chr3 50006181 + RNF123 chr3 49749912 + Exonic hg19 STAD TCGA-BR-7716-01A 39 6 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 47893 ChimerSeq STARFusion TCGA_RNA-Seq GSK3B-LINC00184 GSK3B chr3 119812194 - LINC00184 chr1 234765355 + Exonic hg19 STAD TCGA-BR-7716-01A 35 5 CDS-5'UTR Inter-chr q13.33 CMGC:GSK Tumor suppressor gene q42.3 47894 ChimerSeq STARFusion TCGA_RNA-Seq RSU1-PARG RSU1 chr10 16794538 - PARG chr10 51051678 - Exonic hg19 STAD TCGA-BR-7716-01A 35 3 In-Frame Intra-chr p13 q11.23 Seq+ 47895 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF1-WDR83 RAPGEF1 chr9 134615157 - WDR83 chr19 12784016 + Exonic hg19 STAD TCGA-BR-7716-01A 30 17 5'UTR-5'UTR Inter-chr q34.13 p13.13 Seq+ 47896 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L3-OR4G3P NFE2L3 chr7 26217742 + OR4G3P chr19 94892 + Exonic hg19 STAD TCGA-BR-7716-01A 25 12 Out-of-frame Inter-chr p15.2 Transcription factor p13.3 47897 ChimerSeq STARFusion TCGA_RNA-Seq ZMYND11-PCDH15 ZMYND11 chr10 226068 + PCDH15 chr10 55849823 - Exonic hg19 STAD TCGA-BR-7716-01A 24 9 Out-of-frame Intra-chr p15.3 Tumor suppressor gene q21.1 Seq+ 47898 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP39-ZNF16 ARHGAP39 chr8 145770633 - ZNF16 chr8 146157976 - Exonic hg19 STAD TCGA-BR-7716-01A 18 11 In-Frame Intra-chr q24.3 q24.3 Transcription factor Seq+ 47899 ChimerSeq STARFusion TCGA_RNA-Seq PPP3CC-PIWIL2 PPP3CC chr8 22298971 + PIWIL2 chr8 22210472 + Exonic hg19 STAD TCGA-BR-7716-01A 19 7 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.3 Tumor suppressor gene Seq+ 47900 ChimerSeq STARFusion TCGA_RNA-Seq PARD3B-SLC50A1 PARD3B chr2 205410842 + SLC50A1 chr1 155110455 + Exonic hg19 STAD TCGA-BR-7716-01A 19 5 In-Frame Inter-chr q33.3 q22 Seq+ 47901 ChimerSeq STARFusion TCGA_RNA-Seq CDK13-POU6F2 CDK13 chr7 40118450 + POU6F2 chr7 39379241 + Exonic hg19 STAD TCGA-BR-7716-01A 18 4 Out-of-frame Intra-chr p14.1 p14.1 Tumor suppressor gene Transcription factor Seq+ 47902 ChimerSeq STARFusion TCGA_RNA-Seq SPSB1-H6PD SPSB1 chr1 9353130 + H6PD chr1 9322118 + Exonic hg19 STAD TCGA-BR-7716-01A 18 0 5'UTR-CDS Intra-chr p36.22 p36.22 Seq+ 47903 ChimerSeq STARFusion TCGA_RNA-Seq GPR128-LNP1 GPR128 chr3 100387949 + LNP1 chr3 100170563 + Exonic hg19 STAD TCGA-BR-7716-01A 16 3 In-Frame Intra-chr q12.2 47904 ChimerSeq STARFusion TCGA_RNA-Seq NCEH1-SPATA16 NCEH1 chr3 172428637 - SPATA16 chr3 172766884 - Exonic hg19 STAD TCGA-BR-7716-01A 16 2 In-Frame Intra-chr q26.31 q26.31 Seq+ 47905 ChimerSeq STARFusion TCGA_RNA-Seq DCTN1-M1AP DCTN1 chr2 74605127 - M1AP chr2 74867454 - Exonic hg19 STAD TCGA-BR-7716-01A 15 5 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 47906 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D8-CREG2 TBC1D8 chr2 101706738 - CREG2 chr2 101971828 - Exonic hg19 STAD TCGA-BR-7716-01A 12 3 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 47907 ChimerSeq STARFusion TCGA_RNA-Seq DCTN1-M1AP DCTN1 chr2 74604559 - M1AP chr2 74867454 - Exonic hg19 STAD TCGA-BR-7716-01A 10 5 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 47908 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF1-WDR83 RAPGEF1 chr9 134615157 - WDR83 chr19 12783822 + Exonic hg19 STAD TCGA-BR-7716-01A 7 17 5'UTR-5'UTR Inter-chr q34.13 p13.13 Seq+ 47909 ChimerSeq STARFusion TCGA_RNA-Seq WDR20-DYNC1H1 WDR20 chr14 102606324 + DYNC1H1 chr14 102514154 + Exonic hg19 STAD TCGA-BR-7716-01A 5 12 Out-of-frame Intra-chr q32.31 q32.31 Seq+ 47910 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP39-ZNF16 ARHGAP39 chr8 145780944 - ZNF16 chr8 146157976 - Exonic hg19 STAD TCGA-BR-7716-01A 3 11 Out-of-frame Intra-chr q24.3 q24.3 Transcription factor Seq+ 47911 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106209411 - Exonic hg19 STAD TCGA-VQ-A8PF-01A 172 0 Out-of-frame Inter-chr q21.2 32.33 47912 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076851 + IGHG1 chr14 106209411 - Exonic hg19 STAD TCGA-VQ-A8PF-01A 172 0 Out-of-frame Inter-chr q21.2 q32.33 47913 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106237746 - Exonic hg19 STAD TCGA-VQ-A8PF-01A 94 0 Out-of-frame Inter-chr q21.2 32.33 47914 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076857 + IGH@ chr14 106237740 - Exonic hg19 STAD TCGA-VQ-A8PF-01A 76 0 Out-of-frame Inter-chr q21.2 32.33 47915 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106111130 - Exonic hg19 STAD TCGA-VQ-A8PF-01A 60 0 Out-of-frame Inter-chr q21.2 32.33 47916 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076851 + IGHG1 chr14 106237746 - Exonic hg19 STAD TCGA-VQ-A8PF-01A 53 0 Out-of-frame Inter-chr q21.2 q32.33 47917 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076857 + IGHG1 chr14 106237740 - Exonic hg19 STAD TCGA-VQ-A8PF-01A 44 0 Out-of-frame Inter-chr q21.2 q32.33 47918 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 STAD TCGA-VQ-A8PF-01A 13 0 Out-of-frame Inter-chr q13.33 p21.1 47919 ChimerSeq STARFusion TCGA_RNA-Seq KARS-CFDP1 KARS chr16 75665066 - CFDP1 chr16 75327940 - Exonic hg19 STAD TCGA-VQ-A8P3-01A 84 42 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 47920 ChimerSeq STARFusion TCGA_RNA-Seq TRMU-GRAMD4 TRMU chr22 46742441 + GRAMD4 chr22 47054084 + Exonic hg19 STAD TCGA-VQ-A8P3-01A 72 33 In-Frame Intra-chr q13.31 q13.31 Seq+ 47921 ChimerSeq STARFusion TCGA_RNA-Seq RORA-ANXA2 RORA chr15 60884586 - ANXA2 chr15 60678285 - Exonic hg19 STAD TCGA-VQ-A8P3-01A 62 53 In-Frame Intra-chr q22.2 Transcription factor q22.2 Seq+ 47922 ChimerSeq STARFusion TCGA_RNA-Seq CLPTM1-CBLC CLPTM1 chr19 45465332 + CBLC chr19 45293261 + Exonic hg19 STAD TCGA-VQ-A8P3-01A 57 19 In-Frame Intra-chr q13.32 q13.32 Seq+ 47923 ChimerSeq STARFusion TCGA_RNA-Seq CDCP1-ZDHHC3 CDCP1 chr3 45187698 - ZDHHC3 chr3 45000952 - Exonic hg19 STAD TCGA-VQ-A8P3-01A 50 9 CDS-5'UTR Intra-chr p21.31 Tumor suppressor gene 47924 ChimerSeq STARFusion TCGA_RNA-Seq BRAP-ATXN2 BRAP chr12 112120950 - ATXN2 chr12 111895163 - Exonic hg19 STAD TCGA-VQ-A8P3-01A 40 31 In-Frame Intra-chr q24.12 q24.12 47925 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-TRAP1 CREBBP chr16 3929833 - TRAP1 chr16 3740986 - Exonic hg19 STAD TCGA-VQ-A8P3-01A 34 22 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 47926 ChimerSeq STARFusion TCGA_RNA-Seq RHNO1-TEAD4 RHNO1 chr12 2986448 + TEAD4 chr12 3147134 + Exonic hg19 STAD TCGA-VQ-A8P3-01A 30 1 Out-of-frame Intra-chr p13.33 p13.33 Transcription factor 47927 ChimerSeq STARFusion TCGA_RNA-Seq TULP3-TEAD4 TULP3 chr12 2986448 + TEAD4 chr12 3147134 + Exonic hg19 STAD TCGA-VQ-A8P3-01A 30 1 5'UTR-CDS Intra-chr p13.33 p13.33 Transcription factor Seq+ 47928 ChimerSeq STARFusion TCGA_RNA-Seq KARS-CFDP1 KARS chr16 75665314 - CFDP1 chr16 75327940 - Exonic hg19 STAD TCGA-VQ-A8P3-01A 17 42 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 47929 ChimerSeq STARFusion TCGA_RNA-Seq ZGPAT-PRPF6 ZGPAT chr20 62340331 + PRPF6 chr20 62654110 + Exonic hg19 STAD TCGA-VQ-A8P3-01A 22 10 Out-of-frame Intra-chr q13.33 Transcription factor q13.33 47930 ChimerSeq STARFusion TCGA_RNA-Seq RORA-ANXA2 RORA chr15 60885007 - ANXA2 chr15 60678285 - Exonic hg19 STAD TCGA-VQ-A8P3-01A 10 53 5'UTR-5'UTR Intra-chr q22.2 Transcription factor q22.2 Seq+ 47931 ChimerSeq STARFusion TCGA_RNA-Seq BRAP-ATXN2 BRAP chr12 112120950 - ATXN2 chr12 111902519 - Exonic hg19 STAD TCGA-VQ-A8P3-01A 14 31 In-Frame Intra-chr q24.12 q24.12 47932 ChimerSeq STARFusion TCGA_RNA-Seq MIPOL1-TTC6 MIPOL1 chr14 37717112 + TTC6 chr14 38261469 + Exonic hg19 STAD TCGA-VQ-A8P3-01A 16 15 Out-of-frame Intra-chr q13.3 q21.1 47933 ChimerSeq STARFusion TCGA_RNA-Seq PISD-EIF4ENIF1 PISD chr22 32044087 - EIF4ENIF1 chr22 31867903 - Exonic hg19 STAD TCGA-VQ-A8P3-01A 12 6 5'UTR-CDS Intra-chr q12.2 q12.2 47934 ChimerSeq STARFusion TCGA_RNA-Seq MIPOL1-TTC6 MIPOL1 chr14 37717112 + TTC6 chr14 38259922 + Exonic hg19 STAD TCGA-VQ-A8P3-01A 9 15 Out-of-frame Intra-chr q13.3 q21.1 47935 ChimerSeq STARFusion TCGA_RNA-Seq MIPOL1-TTC6 MIPOL1 chr14 37717112 + TTC6 chr14 38264475 + Exonic hg19 STAD TCGA-VQ-A8P3-01A 8 15 Out-of-frame Intra-chr q13.3 q21.1 47936 ChimerSeq STARFusion TCGA_RNA-Seq MYO1E-SLTM MYO1E chr15 59464096 - SLTM chr15 59186781 - Exonic hg19 STAD TCGA-VQ-A8P3-01A 9 5 Out-of-frame Intra-chr q22.2 q22.1 Seq+ 47937 ChimerSeq STARFusion TCGA_RNA-Seq AXIN1-LUC7L AXIN1 chr16 396148 - LUC7L chr16 239338 - Exonic hg19 STAD TCGA-VQ-A8P3-01A 7 6 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 47938 ChimerSeq STARFusion TCGA_RNA-Seq MTMR9-NECAB1 MTMR9 chr8 11152811 + NECAB1 chr8 91813919 + Exonic hg19 STAD TCGA-BR-8296-01A 7 1 In-Frame Intra-chr p23.1 q21.3 47939 ChimerSeq STARFusion TCGA_RNA-Seq CLDN18-LYZ CLDN18 chr3 137750979 + LYZ chr12 69747546 + Exonic hg19 STAD TCGA-BR-8296-01A 5 3 Out-of-frame Inter-chr q22.3 q15 47940 ChimerSeq STARFusion TCGA_RNA-Seq DDOST-LYZ DDOST chr1 20978617 - LYZ chr12 69747551 + Exonic hg19 STAD TCGA-BR-8296-01A 3 4 Out-of-frame Inter-chr p36.12 q15 47941 ChimerSeq STARFusion TCGA_RNA-Seq YBEY-ARID1A YBEY chr21 47716146 + ARID1A chr1 27057762 + Exonic hg19 STAD TCGA-BR-8296-01A 3 0 Out-of-frame Inter-chr q22.3 p36.11 Oncogene Tumor suppressor gene 47942 ChimerSeq STARFusion TCGA_RNA-Seq ADK-AKAP13 ADK chr10 76285184 + AKAP13 chr15 86182605 + Exonic hg19 STAD TCGA-BR-8296-01A 2 0 In-Frame Inter-chr q22.2 q25.3 Seq+ 47943 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-CYSTM1 ANKHD1 chr5 139781858 + CYSTM1 chr5 139622890 + Exonic hg19 STAD TCGA-BR-8296-01A 2 0 Out-of-frame Intra-chr q31.3 q31.3 47944 ChimerSeq STARFusion TCGA_RNA-Seq ASPSCR1-ANAPC11 ASPSCR1 chr17 79935624 + ANAPC11 chr17 79852343 + Exonic hg19 STAD TCGA-BR-8296-01A 2 0 5'UTR-5'UTR Intra-chr q25.3 q25.3 47945 ChimerSeq STARFusion TCGA_RNA-Seq AUTS2-ANKIB1 AUTS2 chr7 70163606 + ANKIB1 chr7 91948644 + Exonic hg19 STAD TCGA-BR-8296-01A 2 0 Out-of-frame Intra-chr q11.22 q21.2 47946 ChimerSeq STARFusion TCGA_RNA-Seq AXIN1-MYO19 AXIN1 chr16 354304 - MYO19 chr17 34867294 - Exonic hg19 STAD TCGA-BR-8296-01A 2 0 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene q12 47947 ChimerSeq STARFusion TCGA_RNA-Seq EHBP1L1-MPHOSPH8 EHBP1L1 chr11 65358063 + MPHOSPH8 chr13 20245346 + Exonic hg19 STAD TCGA-BR-8296-01A 2 0 Out-of-frame Inter-chr q13.1 q12.11 47948 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2IP-LONP2 ERBB2IP chr5 65290692 + LONP2 chr16 48311249 + Exonic hg19 STAD TCGA-BR-8296-01A 2 0 Out-of-frame Inter-chr q12.1 47949 ChimerSeq STARFusion TCGA_RNA-Seq FAM107B-MCMBP FAM107B chr10 14646239 - MCMBP chr10 121619396 - Exonic hg19 STAD TCGA-BR-8296-01A 2 0 CDS-5'UTR Intra-chr p13 q26.11 47950 ChimerSeq STARFusion TCGA_RNA-Seq GCKR-MTRR GCKR chr2 27721664 + MTRR chr5 7870883 + Exonic hg19 STAD TCGA-BR-8296-01A 2 0 In-Frame Inter-chr p23.3 p15.31 Oncogene 47951 ChimerSeq STARFusion TCGA_RNA-Seq HHLA2-ACPL2 HHLA2 chr3 108015446 + ACPL2 chr3 140978965 + Exonic hg19 STAD TCGA-BR-8296-01A 2 0 5'UTR-5'UTR Intra-chr q13.13 47952 ChimerSeq STARFusion TCGA_RNA-Seq HSD17B12-ZNF143 HSD17B12 chr11 43606224 + ZNF143 chr11 9530166 + Exonic hg19 STAD TCGA-BR-8296-01A 2 0 5'UTR-CDS Intra-chr p11.2 p15.4 Transcription factor 47953 ChimerSeq STARFusion TCGA_RNA-Seq ITFG1-ARHGEF7 ITFG1 chr16 47399699 - ARHGEF7 chr13 111896219 + Exonic hg19 STAD TCGA-BR-8296-01A 2 0 Out-of-frame Inter-chr q12.1 q34 47954 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-FAM114A2 MAP4 chr3 48019355 - FAM114A2 chr5 153414527 - Exonic hg19 STAD TCGA-BR-8296-01A 2 0 CDS-5'UTR Inter-chr p21.31 q33.2 47955 ChimerSeq STARFusion TCGA_RNA-Seq NCK2-TMEM131 NCK2 chr2 106361595 + TMEM131 chr2 98392481 - Exonic hg19 STAD TCGA-BR-8296-01A 2 0 5'UTR-CDS Intra-chr q12.2 q11.2 47956 ChimerSeq STARFusion TCGA_RNA-Seq NKIRAS1-CMC1 NKIRAS1 chr3 23958275 - CMC1 chr3 28304782 + Exonic hg19 STAD TCGA-BR-8296-01A 2 0 5'UTR-CDS Intra-chr p24.2 p24.1 47957 ChimerSeq STARFusion TCGA_RNA-Seq PCYOX1-KLC1 PCYOX1 chr2 70488518 + KLC1 chr14 104135848 + Exonic hg19 STAD TCGA-BR-8296-01A 2 0 In-Frame Inter-chr p13.3 q32.33 47958 ChimerSeq STARFusion TCGA_RNA-Seq PDE3B-TTC39C PDE3B chr11 14666599 + TTC39C chr18 21694518 + Exonic hg19 STAD TCGA-BR-8296-01A 2 0 In-Frame Inter-chr p15.2 q11.2 47959 ChimerSeq STARFusion TCGA_RNA-Seq POLR3A-HNRNPH3 POLR3A chr10 79784729 - HNRNPH3 chr10 70101342 + Exonic hg19 STAD TCGA-BR-8296-01A 2 0 In-Frame Intra-chr q22.3 q21.3 47960 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-HMGB1 RCC1 chr1 28834672 + HMGB1 chr13 31037831 - Exonic hg19 STAD TCGA-BR-8296-01A 2 0 5'UTR-5'UTR Inter-chr p35.3 q12.3 47961 ChimerSeq STARFusion TCGA_RNA-Seq RNF139-KIAA0196 RNF139 chr8 125487531 + KIAA0196 chr8 126051201 - Exonic hg19 STAD TCGA-BR-8296-01A 2 0 Out-of-frame Intra-chr q24.13 47962 ChimerSeq STARFusion TCGA_RNA-Seq RTCB-DEPDC5 RTCB chr22 32802649 - DEPDC5 chr22 32275511 + Exonic hg19 STAD TCGA-BR-8296-01A 2 0 Out-of-frame Intra-chr q12.3 q12.2 47963 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-HMGB1 SNHG3 chr1 28834672 + HMGB1 chr13 31037831 - Exonic hg19 STAD TCGA-BR-8296-01A 2 0 5'UTR-5'UTR Inter-chr p35.3 q12.3 47964 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-NDUFB2 TBL1XR1 chr3 176914909 - NDUFB2 chr7 140402666 + Exonic hg19 STAD TCGA-BR-8296-01A 2 0 5'UTR-CDS Inter-chr q26.32 q34 47965 ChimerSeq STARFusion TCGA_RNA-Seq TWF1-IRAK4 TWF1 chr12 44196089 - IRAK4 chr12 44180202 + Exonic hg19 STAD TCGA-BR-8296-01A 2 0 In-Frame Intra-chr q12 q12 TKL:IRAK 47966 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-BBX ZBTB20 chr3 114412375 - BBX chr3 107364683 + Exonic hg19 STAD TCGA-BR-8296-01A 2 0 5'UTR-5'UTR Intra-chr q13.31 Transcription factor q13.12 Transcription factor 47967 ChimerSeq STARFusion TCGA_RNA-Seq CLDN18-ARHGAP26 CLDN18 chr3 137749947 + ARHGAP26 chr5 142393645 + Exonic hg19 STAD TCGA-BR-8284-01A 39 10 In-Frame Inter-chr q22.3 q31.3 KB Pub Seq+ 47968 ChimerSeq STARFusion TCGA_RNA-Seq IYD-LYZ IYD chr6 150719900 + LYZ chr12 69747556 + Exonic hg19 STAD TCGA-BR-8284-01A 3 1 Out-of-frame Inter-chr q25.1 q15 47969 ChimerSeq STARFusion TCGA_RNA-Seq MYO5B-DYM MYO5B chr18 47721137 - DYM chr18 46905070 - Exonic hg19 STAD TCGA-BR-8284-01A 3 1 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 47970 ChimerSeq STARFusion TCGA_RNA-Seq BAX-ISLR BAX chr19 49459090 + ISLR chr15 74468295 + Exonic hg19 STAD TCGA-BR-8284-01A 3 0 Out-of-frame Inter-chr q13.33 Tumor suppressor gene q24.1 47971 ChimerSeq STARFusion TCGA_RNA-Seq CDC42-SPEN CDC42 chr1 22418187 + SPEN chr1 16258935 + Exonic hg19 STAD TCGA-BR-8284-01A 3 0 Out-of-frame Intra-chr p36.12 p36.21 Transcription factor 47972 ChimerSeq STARFusion TCGA_RNA-Seq DOK1-LOXL3 DOK1 chr2 74776372 + LOXL3 chr2 74780130 - Exonic hg19 STAD TCGA-BR-8284-01A 3 0 Out-of-frame Intra-chr p13.1 Tumor suppressor gene p13.1 47973 ChimerSeq STARFusion TCGA_RNA-Seq IGKJ4-ANKRD36BP2 IGKJ4 chr2 89160398 - ANKRD36BP2 chr2 89072490 + Exonic hg19 STAD TCGA-BR-8284-01A 3 0 Out-of-frame Intra-chr p11.2 p11.2 47974 ChimerSeq STARFusion TCGA_RNA-Seq RNF152-NEDD4L RNF152 chr18 59560028 - NEDD4L chr18 55833020 + Exonic hg19 STAD TCGA-BR-8284-01A 3 0 5'UTR-5'UTR Intra-chr q21.33 q21.31 Tumor suppressor gene 47975 ChimerSeq STARFusion TCGA_RNA-Seq SAV1-MOCS3 SAV1 chr14 51101367 - MOCS3 chr20 49577568 + Exonic hg19 STAD TCGA-BR-8284-01A 3 0 Out-of-frame Inter-chr q22.1 q13.13 47976 ChimerSeq STARFusion TCGA_RNA-Seq SLC12A2-BRI3BP SLC12A2 chr5 127523967 + BRI3BP chr12 125511406 + Exonic hg19 STAD TCGA-BR-8284-01A 3 0 Out-of-frame Inter-chr q23.3 q24.31 47977 ChimerSeq STARFusion TCGA_RNA-Seq SSBP3-AR SSBP3 chr1 54871734 - AR chrX 66766373 + Exonic hg19 STAD TCGA-BR-8284-01A 3 0 Out-of-frame Inter-chr p32.3 q12 Oncogene Tumor suppressor gene Transcription factor 47978 ChimerSeq STARFusion TCGA_RNA-Seq ABCC5-GCN1L1 ABCC5 chr3 183705558 - GCN1L1 chr12 120599862 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Inter-chr q27.1 47979 ChimerSeq STARFusion TCGA_RNA-Seq ANGPTL1-SORBS1 ANGPTL1 chr1 178834089 - SORBS1 chr10 97158946 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Inter-chr q25.2 q24.1 47980 ChimerSeq STARFusion TCGA_RNA-Seq ANP32A-DDX5 ANP32A chr15 69113037 - DDX5 chr17 62500960 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 Out-of-frame Inter-chr q23 Tumor suppressor gene q23.3 47981 ChimerSeq STARFusion TCGA_RNA-Seq AOAH-ARHGAP1 AOAH chr7 36763627 - ARHGAP1 chr11 46703732 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 Out-of-frame Inter-chr p14.2 p11.2 47982 ChimerSeq STARFusion TCGA_RNA-Seq ARF5-RPS9 ARF5 chr7 127229648 + RPS9 chr19 54711266 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 CDS-3'UTR Inter-chr q32.1 47983 ChimerSeq STARFusion TCGA_RNA-Seq ATP11B-B3GNT5 ATP11B chr3 182616560 + B3GNT5 chr3 182987286 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 CDS-5'UTR Intra-chr q26.33 Oncogene q27.1 47984 ChimerSeq STARFusion TCGA_RNA-Seq C14orf64-COQ6 C14orf64 chr14 98435610 - COQ6 chr14 74429673 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 3'UTR-CDS Intra-chr q24.3 47985 ChimerSeq STARFusion TCGA_RNA-Seq C17orf62-MTA1 C17orf62 chr17 80408576 - MTA1 chr14 105935804 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 5'UTR-CDS Inter-chr q25.3 q32.33 47986 ChimerSeq STARFusion TCGA_RNA-Seq C2orf69-ATIC C2orf69 chr2 200776494 + ATIC chr2 216213817 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Intra-chr q33.1 q35 47987 ChimerSeq STARFusion TCGA_RNA-Seq C9-FBXW4 C9 chr5 39424906 - FBXW4 chr10 103436193 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 5'UTR-CDS Inter-chr p13.1 q24.32 47988 ChimerSeq STARFusion TCGA_RNA-Seq CHMP3-ZNF638 CHMP3 chr2 86790427 - ZNF638 chr2 71582849 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Intra-chr p11.2 p13.3 47989 ChimerSeq STARFusion TCGA_RNA-Seq CLIP2-SH3PXD2A CLIP2 chr7 73731997 + SH3PXD2A chr10 105420872 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Inter-chr q11.23 q24.33 47990 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-RPL12 CPSF6 chr12 69656342 + RPL12 chr9 130210702 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 3'UTR-CDS Inter-chr q15 q33.3 47991 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-SH2D3C CREBBP chr16 3799628 - SH2D3C chr9 130523929 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene q34.11 47992 ChimerSeq STARFusion TCGA_RNA-Seq CTTNBP2NL-ST7L CTTNBP2NL chr1 112938894 + ST7L chr1 113084712 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 5'UTR-CDS Intra-chr p13.2 p13.2 47993 ChimerSeq STARFusion TCGA_RNA-Seq CUX1-ZNF394 CUX1 chr7 101821937 + ZNF394 chr7 99092254 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 Out-of-frame Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 Transcription factor 47994 ChimerSeq STARFusion TCGA_RNA-Seq DAB2-FBXW4 DAB2 chr5 39424906 - FBXW4 chr10 103436193 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 5'UTR-CDS Inter-chr p13.1 Tumor suppressor gene q24.32 47995 ChimerSeq STARFusion TCGA_RNA-Seq DEPDC1B-GALC DEPDC1B chr5 59938639 - GALC chr14 88448587 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 Out-of-frame Inter-chr q12.1 q31.3 47996 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-UGT1A1 DGKD chr2 234299129 + UGT1A1 chr2 234675680 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Intra-chr q37.1 Oncogene 47997 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-UGT1A10 DGKD chr2 234299129 + UGT1A10 chr2 234675680 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Intra-chr q37.1 47998 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-UGT1A3 DGKD chr2 234299129 + UGT1A3 chr2 234675680 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Intra-chr q37.1 47999 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-UGT1A4 DGKD chr2 234299129 + UGT1A4 chr2 234675680 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Intra-chr q37.1 Seq+ 48000 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-UGT1A5 DGKD chr2 234299129 + UGT1A5 chr2 234675680 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Intra-chr q37.1 48001 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-UGT1A6 DGKD chr2 234299129 + UGT1A6 chr2 234675680 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Intra-chr q37.1 48002 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-UGT1A7 DGKD chr2 234299129 + UGT1A7 chr2 234675680 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Intra-chr q37.1 48003 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-UGT1A8 DGKD chr2 234299129 + UGT1A8 chr2 234675680 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Intra-chr q37.1 48004 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-UGT1A9 DGKD chr2 234299129 + UGT1A9 chr2 234675680 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Intra-chr q37.1 48005 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB12-NEK5 DNAJB12 chr10 74114523 - NEK5 chr13 52650279 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 Out-of-frame Inter-chr q22.1 q14.3 Other:NEK 48006 ChimerSeq STARFusion TCGA_RNA-Seq DUSP16-MDM1 DUSP16 chr12 12639962 - MDM1 chr12 68696652 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 Out-of-frame Intra-chr q15 48007 ChimerSeq STARFusion TCGA_RNA-Seq EIF4A2-AARS EIF4A2 chr3 186501428 + AARS chr16 70316687 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 CDS-5'UTR Inter-chr q27.3 q22.1 48008 ChimerSeq STARFusion TCGA_RNA-Seq EIF4A2-NUP107 EIF4A2 chr3 186504434 + NUP107 chr12 69109407 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Inter-chr q27.3 q15 48009 ChimerSeq STARFusion TCGA_RNA-Seq ELOVL7-ALS2 ELOVL7 chr5 60083161 - ALS2 chr2 202633668 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 CDS-5'UTR Inter-chr q12.1 q33.1 48010 ChimerSeq STARFusion TCGA_RNA-Seq ELOVL7-SLC20A2 ELOVL7 chr5 60079921 - SLC20A2 chr8 42390478 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 Out-of-frame Inter-chr q12.1 p11.21 48011 ChimerSeq STARFusion TCGA_RNA-Seq FAM135A-FBXO9 FAM135A chr6 71246114 + FBXO9 chr6 52960311 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 Out-of-frame Intra-chr q13 p12.1 48012 ChimerSeq STARFusion TCGA_RNA-Seq FAM69A-ENSA FAM69A chr1 93312740 - ENSA chr1 150598284 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Intra-chr p22.1 q21.3 Seq+ 48013 ChimerSeq STARFusion TCGA_RNA-Seq FBXO46-NVL FBXO46 chr19 46234107 - NVL chr1 224455835 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 5'UTR-CDS Inter-chr q13.32 q42.11 48014 ChimerSeq STARFusion TCGA_RNA-Seq FRMPD3-MBNL1 FRMPD3 chrX 106776780 + MBNL1 chr3 152132730 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 Out-of-frame Inter-chr q22.3 q25.1 48015 ChimerSeq STARFusion TCGA_RNA-Seq FUT8-ACTN1 FUT8 chr14 65922436 + ACTN1 chr14 69392389 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 5'UTR-5'UTR Intra-chr q23.3 q24.1 48016 ChimerSeq STARFusion TCGA_RNA-Seq GBF1-ARF3 GBF1 chr10 104103939 + ARF3 chr12 49334971 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 CDS-5'UTR Inter-chr q24.32 q13.12 48017 ChimerSeq STARFusion TCGA_RNA-Seq HDHD2-PIAS1 HDHD2 chr18 44676749 - PIAS1 chr15 68457069 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 5'UTR-CDS Inter-chr q21.1 q23 Tumor suppressor gene 48018 ChimerSeq STARFusion TCGA_RNA-Seq INTS9-LEPROTL1 INTS9 chr8 28747391 - LEPROTL1 chr8 29959414 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 Out-of-frame Intra-chr p21.1 p12 48019 ChimerSeq STARFusion TCGA_RNA-Seq ITGA1-LAMA4 ITGA1 chr5 52084248 + LAMA4 chr6 112452303 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 Out-of-frame Inter-chr q11.2 q21 48020 ChimerSeq STARFusion TCGA_RNA-Seq LGALS4-NAE1 LGALS4 chr19 39294509 - NAE1 chr16 66839729 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 Out-of-frame Inter-chr q22.1 48021 ChimerSeq STARFusion TCGA_RNA-Seq LMBR1-RHEB LMBR1 chr7 156549087 - RHEB chr7 151188100 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Intra-chr q36.3 q36.1 Oncogene 48022 ChimerSeq STARFusion TCGA_RNA-Seq LPP-ZNF345 LPP chr3 188202492 + ZNF345 chr19 37367687 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 CDS-5'UTR Inter-chr q27.3 Oncogene q13.12 Transcription factor 48023 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-CCT2 LYZ chr12 69746078 + CCT2 chr12 69983265 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Intra-chr q15 q15 Seq+ 48024 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K7-MYO6 MAP3K7 chr6 91296483 - MYO6 chr6 76540133 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Intra-chr q15 STE:STE11 Oncogene q14.1 48025 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-PLCL1 MAP4 chr3 48130263 - PLCL1 chr2 198966009 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 5'UTR-CDS Inter-chr p21.31 q33.1 48026 ChimerSeq STARFusion TCGA_RNA-Seq MBOAT1-CDKAL1 MBOAT1 chr6 20124639 - CDKAL1 chr6 20649524 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Intra-chr p22.3 p22.3 Seq+ 48027 ChimerSeq STARFusion TCGA_RNA-Seq METTL5-GGPS1 METTL5 chr2 170680999 - GGPS1 chr1 235498557 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 CDS-5'UTR Inter-chr q31.1 q42.3 48028 ChimerSeq STARFusion TCGA_RNA-Seq MGMT-DOCK1 MGMT chr10 131334641 + DOCK1 chr10 128859932 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Intra-chr q26.3 q26.2 Seq+ 48029 ChimerSeq STARFusion TCGA_RNA-Seq MICU1-EEF1D MICU1 chr10 74385768 - EEF1D chr8 144669022 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 5'UTR-5'UTR Inter-chr q22.1 48030 ChimerSeq STARFusion TCGA_RNA-Seq MPRIP-METTL12 MPRIP chr17 16946285 + METTL12 chr11 62433119 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 CDS-5'UTR Inter-chr p11.2 q12.3 48031 ChimerSeq STARFusion TCGA_RNA-Seq MTX2-RNPC3 MTX2 chr2 177134397 + RNPC3 chr1 104097656 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 CDS-3'UTR Inter-chr q31.1 p21.1 48032 ChimerSeq STARFusion TCGA_RNA-Seq NDUFB6-SEPSECS NDUFB6 chr9 32570958 - SEPSECS chr4 25160729 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Inter-chr p21.1 p15.2 Seq+ 48033 ChimerSeq STARFusion TCGA_RNA-Seq NQO2-FBXL6 NQO2 chr6 3006793 + FBXL6 chr8 145580575 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 Out-of-frame Inter-chr p25.2 q24.3 48034 ChimerSeq STARFusion TCGA_RNA-Seq PDE7A-TBL1X PDE7A chr8 66753606 - TBL1X chrX 9608313 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 CDS-5'UTR Inter-chr q13.1 p22.31 48035 ChimerSeq STARFusion TCGA_RNA-Seq PELO-LAMA4 PELO chr5 52084248 + LAMA4 chr6 112452303 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 5'UTR-CDS Inter-chr q11.2 q21 Seq+ 48036 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R5A-ZNF638 PPP2R5A chr1 212459633 + ZNF638 chr2 71645732 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 Out-of-frame Inter-chr q32.3 p13.3 48037 ChimerSeq STARFusion TCGA_RNA-Seq PRKCA-FXR1 PRKCA chr17 64785097 + FXR1 chr3 180693101 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 Out-of-frame Inter-chr q24.2 q26.33 48038 ChimerSeq STARFusion TCGA_RNA-Seq PRKRA-ATP6V0A1 PRKRA chr2 179312232 - ATP6V0A1 chr17 40647052 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 Out-of-frame Inter-chr q31.2 q21.2 48039 ChimerSeq STARFusion TCGA_RNA-Seq PRR16-GDF9 PRR16 chr5 119800340 + GDF9 chr5 132198248 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 5'UTR-CDS Intra-chr q23.1 q31.1 48040 ChimerSeq STARFusion TCGA_RNA-Seq PRUNE-ARNT PRUNE chr1 150991145 + ARNT chr1 150812130 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Intra-chr q21.3 Oncogene Transcription factor 48041 ChimerSeq STARFusion TCGA_RNA-Seq PTPRC-STAG1 PTPRC chr1 198661502 + STAG1 chr3 136096594 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 Out-of-frame Inter-chr Tumor suppressor gene q22.3 Seq+ 48042 ChimerSeq STARFusion TCGA_RNA-Seq PTPRE-DOCK1 PTPRE chr10 129705573 + DOCK1 chr10 129046272 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 5'UTR-CDS Intra-chr q26.2 q26.2 48043 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-DDX52 PUM1 chr1 31532051 - DDX52 chr17 35974398 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 Out-of-frame Inter-chr p35.2 q12 48044 ChimerSeq STARFusion TCGA_RNA-Seq PXDNL-WTAP PXDNL chr8 52320627 - WTAP chr6 160174492 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Inter-chr q11.23 q25.3 48045 ChimerSeq STARFusion TCGA_RNA-Seq RAD21-TOPBP1 RAD21 chr8 117878825 - TOPBP1 chr3 133363207 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 Out-of-frame Inter-chr q24.11 q22.1 48046 ChimerSeq STARFusion TCGA_RNA-Seq RAI14-MVB12B RAI14 chr5 34687060 + MVB12B chr9 129143343 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 Out-of-frame Inter-chr p13.2 q33.3 48047 ChimerSeq STARFusion TCGA_RNA-Seq RASGRP3-SMARCC1 RASGRP3 chr2 33701774 + SMARCC1 chr3 47680270 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 5'UTR-CDS Inter-chr p22.3 p21.31 Tumor suppressor gene 48048 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-RTF1 RCC1 chr1 28834672 + RTF1 chr15 41730519 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 5'UTR-CDS Inter-chr p35.3 q15.1 Seq+ 48049 ChimerSeq STARFusion TCGA_RNA-Seq S100A6-KLF13 S100A6 chr1 153507678 - KLF13 chr15 31664213 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 Out-of-frame Inter-chr q21.3 Transcription factor 48050 ChimerSeq STARFusion TCGA_RNA-Seq SENP6-PTP4A1 SENP6 chr6 76312292 + PTP4A1 chr6 64286341 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 CDS-5'UTR Intra-chr q14.1 q12 48051 ChimerSeq STARFusion TCGA_RNA-Seq SERP1-MBNL1 SERP1 chr3 150284688 - MBNL1 chr3 152132730 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 5'UTR-CDS Intra-chr q25.1 q25.1 48052 ChimerSeq STARFusion TCGA_RNA-Seq SH3RF1-DCAF8 SH3RF1 chr4 170189971 - DCAF8 chr1 160231148 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 CDS-5'UTR Inter-chr q33 q23.2 48053 ChimerSeq STARFusion TCGA_RNA-Seq SLC38A9-SNX13 SLC38A9 chr5 54993674 - SNX13 chr7 17838777 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 Out-of-frame Inter-chr q11.2 p21.1 48054 ChimerSeq STARFusion TCGA_RNA-Seq SMYD3-DAZAP1 SMYD3 chr1 246670356 - DAZAP1 chr19 1417499 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Inter-chr q44 Transcription factor p13.3 48055 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-RTF1 SNHG3 chr1 28834672 + RTF1 chr15 41730519 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 5'UTR-CDS Inter-chr p35.3 q15.1 48056 ChimerSeq STARFusion TCGA_RNA-Seq SNHG5-EIF4G3 SNHG5 chr6 86387672 - EIF4G3 chr1 21377487 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 3'UTR-5'UTR Inter-chr q14.3 p36.12 48057 ChimerSeq STARFusion TCGA_RNA-Seq SPRY4-KIAA0586 SPRY4 chr5 141704409 - KIAA0586 chr14 58949231 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 5'UTR-CDS Inter-chr q31.3 Tumor suppressor gene q23.1 48058 ChimerSeq STARFusion TCGA_RNA-Seq TIAL1-KDM6B TIAL1 chr10 121347664 - KDM6B chr17 7748219 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 CDS-5'UTR Inter-chr q26.11 p13.1 48059 ChimerSeq STARFusion TCGA_RNA-Seq TSHZ1-ZADH2 TSHZ1 chr18 72923871 + ZADH2 chr18 72914295 - Exonic hg19 STAD TCGA-BR-8284-01A 2 0 5'UTR-CDS Intra-chr q22.3 Transcription factor q22.3 48060 ChimerSeq STARFusion TCGA_RNA-Seq TUBGCP2-TSPAN4 TUBGCP2 chr10 135106003 - TSPAN4 chr11 864437 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 Out-of-frame Inter-chr q26.3 p15.5 48061 ChimerSeq STARFusion TCGA_RNA-Seq UBA1-SF3B2 UBA1 chrX 47065843 + SF3B2 chr11 65826301 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 In-Frame Inter-chr p11.3 q13.1 48062 ChimerSeq STARFusion TCGA_RNA-Seq WWP1-ERI1 WWP1 chr8 87414432 + ERI1 chr8 8887302 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 Out-of-frame Intra-chr q21.3 p23.1 48063 ChimerSeq STARFusion TCGA_RNA-Seq XRCC4-LONP2 XRCC4 chr5 82491755 + LONP2 chr16 48368127 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 Out-of-frame Inter-chr q14.2 q12.1 48064 ChimerSeq STARFusion TCGA_RNA-Seq YWHAG-C9orf3 YWHAG chr7 75988039 - C9orf3 chr9 97848964 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 CDS-3'UTR Inter-chr q11.23 q22.32 48065 ChimerSeq STARFusion TCGA_RNA-Seq ZEB1-YPEL2 ZEB1 chr10 31608221 + YPEL2 chr17 57430576 + Exonic hg19 STAD TCGA-BR-8284-01A 2 0 CDS-5'UTR Inter-chr p11.22 Transcription factor q22 48066 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-HAUS8 CEACAM5 chr19 42233234 + HAUS8 chr19 17184668 - Exonic hg19 STAD TCGA-BR-A4J5-01A 4 0 Out-of-frame Intra-chr q13.2 p13.11 48067 ChimerSeq STARFusion TCGA_RNA-Seq HSP90AA1-PDIA3 HSP90AA1 chr14 102551252 - PDIA3 chr15 44063340 + Exonic hg19 STAD TCGA-BR-A4J5-01A 3 1 Out-of-frame Inter-chr q32.31 Oncogene q15.3 48068 ChimerSeq STARFusion TCGA_RNA-Seq CAV1-C11orf24 CAV1 chr7 116199708 + C11orf24 chr11 68029650 - Exonic hg19 STAD TCGA-BR-A4J5-01A 3 0 Out-of-frame Inter-chr q31.2 Tumor suppressor gene q13.2 48069 ChimerSeq STARFusion TCGA_RNA-Seq FAM20C-PRKAR1B FAM20C chr7 208976 + PRKAR1B chr7 591107 - Exonic hg19 STAD TCGA-BR-A4J5-01A 3 0 Out-of-frame Intra-chr p22.3 p22.3 48070 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-snoU13 GNB1 chr1 1716739 - snoU13 chr5 149408918 - Exonic hg19 STAD TCGA-BR-A4J5-01A 3 0 Out-of-frame Inter-chr p36.33 48071 ChimerSeq STARFusion TCGA_RNA-Seq GNPTAB-STIM2 GNPTAB chr12 102224337 - STIM2 chr4 26921126 + Exonic hg19 STAD TCGA-BR-A4J5-01A 3 0 Out-of-frame Inter-chr q23.2 p15.2 48072 ChimerSeq STARFusion TCGA_RNA-Seq HSP90B1-ACTR2 HSP90B1 chr12 104332196 + ACTR2 chr2 65454967 + Exonic hg19 STAD TCGA-BR-A4J5-01A 3 0 Out-of-frame Inter-chr q23.3 Tumor suppressor gene p14 TKL:STKR 48073 ChimerSeq STARFusion TCGA_RNA-Seq IGFBP5-CEACAM6 IGFBP5 chr2 217541204 - CEACAM6 chr19 42259445 + Exonic hg19 STAD TCGA-BR-A4J5-01A 3 0 Out-of-frame Inter-chr q35 Tumor suppressor gene q13.2 48074 ChimerSeq STARFusion TCGA_RNA-Seq IMPDH2-MYH14 IMPDH2 chr3 49062099 - MYH14 chr19 50783333 + Exonic hg19 STAD TCGA-BR-A4J5-01A 3 0 Out-of-frame Inter-chr p21.31 q13.33 48075 ChimerSeq STARFusion TCGA_RNA-Seq MTG2-AGR2 MTG2 chr20 60776043 + AGR2 chr7 16841341 - Exonic hg19 STAD TCGA-BR-A4J5-01A 3 0 Out-of-frame Inter-chr q13.33 p21.1 48076 ChimerSeq STARFusion TCGA_RNA-Seq NCS1-SPARC NCS1 chr9 132996122 + SPARC chr5 151041498 - Exonic hg19 STAD TCGA-BR-A4J5-01A 3 0 Out-of-frame Inter-chr q34.11 q33.1 Tumor suppressor gene 48077 ChimerSeq STARFusion TCGA_RNA-Seq PRMT2-CXCL14 PRMT2 chr21 48068449 + CXCL14 chr5 134907509 - Exonic hg19 STAD TCGA-BR-A4J5-01A 3 0 Out-of-frame Inter-chr q22.3 q31.1 Tumor suppressor gene 48078 ChimerSeq STARFusion TCGA_RNA-Seq SSR1-PHF14 SSR1 chr6 7287645 - PHF14 chr7 11022268 + Exonic hg19 STAD TCGA-BR-A4J5-01A 3 0 Out-of-frame Inter-chr p24.3 p21.3 48079 ChimerSeq STARFusion TCGA_RNA-Seq SVIL-PAIP2 SVIL chr10 29822000 - PAIP2 chr5 138677553 + Exonic hg19 STAD TCGA-BR-A4J5-01A 3 0 Out-of-frame Inter-chr p11.23 q31.2 Tumor suppressor gene 48080 ChimerSeq STARFusion TCGA_RNA-Seq LRRC8B-PARP12 LRRC8B chr1 90034052 + PARP12 chr7 139728488 - Exonic hg19 STAD TCGA-BR-A4J5-01A 2 1 5'UTR-CDS Inter-chr p22.2 q34 48081 ChimerSeq STARFusion TCGA_RNA-Seq ABI3BP-ESYT2 ABI3BP chr3 100553528 - ESYT2 chr7 158527162 - Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 Out-of-frame Inter-chr q12.2 q36.3 48082 ChimerSeq STARFusion TCGA_RNA-Seq ACTG1-SGCA ACTG1 chr17 79478789 - SGCA chr17 48248001 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 3'UTR-CDS Intra-chr q25.3 q21.33 48083 ChimerSeq STARFusion TCGA_RNA-Seq ADI1-POLE4 ADI1 chr2 3517628 - POLE4 chr2 75196536 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 Out-of-frame Intra-chr p12 48084 ChimerSeq STARFusion TCGA_RNA-Seq C10orf118-HNF4A C10orf118 chr10 115932900 - HNF4A chr20 43056975 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 5'UTR-CDS Inter-chr q13.12 Tumor suppressor gene Transcription factor 48085 ChimerSeq STARFusion TCGA_RNA-Seq CADPS2-ING3 CADPS2 chr7 122303291 - ING3 chr7 120604796 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 In-Frame Intra-chr q31.32 q31.31 Tumor suppressor gene 48086 ChimerSeq STARFusion TCGA_RNA-Seq CERS5-UBE2D2 CERS5 chr12 50560884 - UBE2D2 chr5 138979957 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 Out-of-frame Inter-chr q13.12 q31.2 48087 ChimerSeq STARFusion TCGA_RNA-Seq CNOT4-CREB3L2 CNOT4 chr7 135194637 - CREB3L2 chr7 137600758 - Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 5'UTR-CDS Intra-chr q33 q33 Transcription factor 48088 ChimerSeq STARFusion TCGA_RNA-Seq DDX60-ZCCHC6 DDX60 chr4 169232149 - ZCCHC6 chr9 88916516 - Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 In-Frame Inter-chr q32.3 q21.33 48089 ChimerSeq STARFusion TCGA_RNA-Seq DLG5-MYH11 DLG5 chr10 79628887 - MYH11 chr16 15865569 - Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 In-Frame Inter-chr q22.3 Oncogene 48090 ChimerSeq STARFusion TCGA_RNA-Seq FMNL2-KIAA2013 FMNL2 chr2 153468119 + KIAA2013 chr1 11980389 - Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 In-Frame Inter-chr q23.3 p36.22 48091 ChimerSeq STARFusion TCGA_RNA-Seq FN1-ATIC FN1 chr2 216238045 - ATIC chr2 216213817 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 Out-of-frame Intra-chr q35 Oncogene q35 48092 ChimerSeq STARFusion TCGA_RNA-Seq HCG17-TRIM26 HCG17 chr6 30293786 - TRIM26 chr6 30172542 - Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 Out-of-frame Intra-chr 48093 ChimerSeq STARFusion TCGA_RNA-Seq HCG18-TRIM26 HCG18 chr6 30293786 - TRIM26 chr6 30172542 - Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 3'UTR-5'UTR Intra-chr Seq+ 48094 ChimerSeq STARFusion TCGA_RNA-Seq HMGN2-TPM2 HMGN2 chr1 26800018 + TPM2 chr9 35684312 - Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 In-Frame Inter-chr p36.11 p13.3 48095 ChimerSeq STARFusion TCGA_RNA-Seq IER2-LARP1 IER2 chr19 13261366 + LARP1 chr5 154169885 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 5'UTR-CDS Inter-chr p13.13 q33.2 48096 ChimerSeq STARFusion TCGA_RNA-Seq KMT2E-ORC5 KMT2E chr7 104742641 + ORC5 chr7 103777340 - Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 Out-of-frame Intra-chr q22.3 q22.2 48097 ChimerSeq STARFusion TCGA_RNA-Seq LMBR1-C14orf159 LMBR1 chr7 156526871 - C14orf159 chr14 91691028 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 Out-of-frame Inter-chr q36.3 q32.11 48098 ChimerSeq STARFusion TCGA_RNA-Seq LTBP1-SLC20A1 LTBP1 chr2 33540336 + SLC20A1 chr2 113414699 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 In-Frame Intra-chr p22.3 q14.1 48099 ChimerSeq STARFusion TCGA_RNA-Seq MECOM-NAA50 MECOM chr3 169381124 - NAA50 chr3 113442942 - Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 Out-of-frame Intra-chr q26.2 Transcription factor q13.31 48100 ChimerSeq STARFusion TCGA_RNA-Seq MEF2A-MLLT4 MEF2A chr15 100173378 + MLLT4 chr6 168271063 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 Out-of-frame Inter-chr q26.3 Transcription factor 48101 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-RBX1 MKL1 chr22 40990678 - RBX1 chr22 41363803 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 5'UTR-CDS Intra-chr q13.2 q13.2 48102 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-XPNPEP3 MKL1 chr22 40990678 - XPNPEP3 chr22 41363803 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 5'UTR-3'UTR Intra-chr q13.2 q13.2 48103 ChimerSeq STARFusion TCGA_RNA-Seq MRPL42-CNOT2 MRPL42 chr12 93881436 + CNOT2 chr12 70735887 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 In-Frame Intra-chr q22 q15 48104 ChimerSeq STARFusion TCGA_RNA-Seq NEO1-GALK2 NEO1 chr15 73470768 + GALK2 chr15 49620149 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 Out-of-frame Intra-chr q24.1 q21.1 48105 ChimerSeq STARFusion TCGA_RNA-Seq NRIP1-USP25 NRIP1 chr21 16386665 - USP25 chr21 17236587 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 5'UTR-CDS Intra-chr q21.1 q21.1 Seq+ 48106 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL5-PTPN9 OSBPL5 chr11 3147703 - PTPN9 chr15 75772255 - Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 In-Frame Inter-chr p15.4 q24.2 48107 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL9-TPM1 OSBPL9 chr1 52179751 + TPM1 chr15 63349184 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 In-Frame Inter-chr p32.3 q22.2 48108 ChimerSeq STARFusion TCGA_RNA-Seq PCGF3-ACTR3 PCGF3 chr4 738476 + ACTR3 chr2 114709056 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 In-Frame Inter-chr p16.3 q14.1 48109 ChimerSeq STARFusion TCGA_RNA-Seq PROSC-RPS8 PROSC chr8 37623873 + RPS8 chr1 45241706 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 CDS-3'UTR Inter-chr p34.1 48110 ChimerSeq STARFusion TCGA_RNA-Seq PRPF39-FAM179B PRPF39 chr14 45553452 + FAM179B chr14 45535781 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 5'UTR-CDS Intra-chr q21.2 48111 ChimerSeq STARFusion TCGA_RNA-Seq PXN-UBC PXN chr12 120703420 - UBC chr12 125398320 - Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 CDS-5'UTR Intra-chr q24.23 q24.31 48112 ChimerSeq STARFusion TCGA_RNA-Seq RAB20-B3GALNT2 RAB20 chr13 111213695 - B3GALNT2 chr1 235647831 - Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 In-Frame Inter-chr q34 48113 ChimerSeq STARFusion TCGA_RNA-Seq RABEPK-ZC3H14 RABEPK chr9 127975801 + ZC3H14 chr14 89073587 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 In-Frame Inter-chr q33.3 q31.3 48114 ChimerSeq STARFusion TCGA_RNA-Seq RICTOR-AATF RICTOR chr5 39074213 - AATF chr17 35413901 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 Out-of-frame Inter-chr p13.1 48115 ChimerSeq STARFusion TCGA_RNA-Seq RNF19A-PPP2R2A RNF19A chr8 101322095 - PPP2R2A chr8 26211984 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 5'UTR-CDS Intra-chr q22.2 p21.2 48116 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L1-ZNF431 SIPA1L1 chr14 71884913 + ZNF431 chr19 21372668 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 Out-of-frame Inter-chr q24.2 p12 Transcription factor 48117 ChimerSeq STARFusion TCGA_RNA-Seq SLC12A9-VMP1 SLC12A9 chr7 100454798 + VMP1 chr17 57842413 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 Out-of-frame Inter-chr q22.1 q23.1 48118 ChimerSeq STARFusion TCGA_RNA-Seq SOGA1-RIPK1 SOGA1 chr20 35457457 - RIPK1 chr6 3076998 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 CDS-5'UTR Inter-chr q11.23 p25.2 TKL:RIPK 48119 ChimerSeq STARFusion TCGA_RNA-Seq STAT5B-VAPB STAT5B chr17 40428266 - VAPB chr20 56993267 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 5'UTR-5'UTR Inter-chr q21.2 Transcription factor q13.32 48120 ChimerSeq STARFusion TCGA_RNA-Seq STAU2-RPL7 STAU2 chr8 74659018 - RPL7 chr8 74205032 - Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 5'UTR-CDS Intra-chr q21.11 q21.11 48121 ChimerSeq STARFusion TCGA_RNA-Seq SYTL2-EED SYTL2 chr11 85429833 - EED chr11 85988022 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 In-Frame Intra-chr q14.1 q14.2 Tumor suppressor gene 48122 ChimerSeq STARFusion TCGA_RNA-Seq TAMM41-VGLL4 TAMM41 chr3 11849307 - VGLL4 chr3 11744521 - Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 CDS-5'UTR Intra-chr p25.2 p25.2 48123 ChimerSeq STARFusion TCGA_RNA-Seq TMCO3-PITRM1 TMCO3 chr13 114175048 + PITRM1 chr10 3189929 - Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 In-Frame Inter-chr q34 p15.2 48124 ChimerSeq STARFusion TCGA_RNA-Seq TMEM66-RBPMS TMEM66 chr8 29940363 - RBPMS chr8 30361803 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 Out-of-frame Intra-chr p12 48125 ChimerSeq STARFusion TCGA_RNA-Seq TNIK-ECT2 TNIK chr3 171087409 - ECT2 chr3 172520406 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 Out-of-frame Intra-chr q26.31 STE:STE20 q26.31 Tumor suppressor gene 48126 ChimerSeq STARFusion TCGA_RNA-Seq TSTD2-HABP4 TSTD2 chr9 100395525 - HABP4 chr9 99246744 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 5'UTR-CDS Intra-chr q22.33 q22.32 48127 ChimerSeq STARFusion TCGA_RNA-Seq VAV3-PWWP2B VAV3 chr1 108417523 - PWWP2B chr10 134218130 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 Out-of-frame Inter-chr p13.3 q26.3 48128 ChimerSeq STARFusion TCGA_RNA-Seq WRN-VPS37A WRN chr8 30891489 + VPS37A chr8 17123416 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 5'UTR-CDS Intra-chr p12 Oncogene p22 48129 ChimerSeq STARFusion TCGA_RNA-Seq WTAPP1-BICC1 WTAPP1 chr11 102663992 + BICC1 chr10 60461834 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 Out-of-frame Inter-chr q22.2 q21.1 48130 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB38-RASA2 ZBTB38 chr3 141122873 + RASA2 chr3 141231005 + Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 5'UTR-CDS Intra-chr q23 Transcription factor q23 48131 ChimerSeq STARFusion TCGA_RNA-Seq ZNF254-CAPN8 ZNF254 chr19 24216423 + CAPN8 chr1 223718212 - Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 5'UTR-CDS Inter-chr p12 Transcription factor q41 48132 ChimerSeq STARFusion TCGA_RNA-Seq ZNF516-THADA ZNF516 chr18 74090810 - THADA chr2 43625278 - Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 Out-of-frame Inter-chr q23 Transcription factor p21 48133 ChimerSeq STARFusion TCGA_RNA-Seq SDC4-TP53TG5 SDC4 chr20 43976965 - TP53TG5 chr20 44006253 - Exonic hg19 STAD TCGA-HU-A4HD-01A 200 84 In-Frame Intra-chr q13.12 q13.12 Seq+ 48134 ChimerSeq STARFusion TCGA_RNA-Seq MRPS18B-PPP1R10 MRPS18B chr6 30587766 + PPP1R10 chr6 30586405 - Exonic hg19 STAD TCGA-HU-A4HD-01A 205 26 CDS-5'UTR Intra-chr 48135 ChimerSeq STARFusion TCGA_RNA-Seq CLDN7-UTS2R CLDN7 chr17 7164140 - UTS2R chr17 80332119 + Exonic hg19 STAD TCGA-HU-A4HD-01A 196 36 CDS-5'UTR Intra-chr p13.1 q25.3 Seq+ 48136 ChimerSeq STARFusion TCGA_RNA-Seq TEX2-STARD3 TEX2 chr17 62270919 - STARD3 chr17 37813261 + Exonic hg19 STAD TCGA-HU-A4HD-01A 103 27 Out-of-frame Intra-chr q23.3 q12 Seq+ 48137 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G3-C7orf50 EIF4G3 chr1 21377359 - C7orf50 chr7 1049779 - Exonic hg19 STAD TCGA-HU-A4HD-01A 99 18 5'UTR-CDS Inter-chr p36.12 p22.3 Seq+ 48138 ChimerSeq STARFusion TCGA_RNA-Seq PRKD2-MYH14 PRKD2 chr19 47207426 - MYH14 chr19 50747499 + Exonic hg19 STAD TCGA-HU-A4HD-01A 86 14 In-Frame Intra-chr q13.32 q13.33 Seq+ 48139 ChimerSeq STARFusion TCGA_RNA-Seq HSPG2-MYBPHL HSPG2 chr1 22222415 - MYBPHL chr1 109836871 - Exonic hg19 STAD TCGA-HU-A4HD-01A 81 8 In-Frame Intra-chr p36.12 p13.3 Seq+ 48140 ChimerSeq STARFusion TCGA_RNA-Seq RHPN2-ZNF677 RHPN2 chr19 33535155 - ZNF677 chr19 53747150 - Exonic hg19 STAD TCGA-HU-A4HD-01A 69 8 Out-of-frame Intra-chr q13.11 q13.42 Transcription factor Seq+ 48141 ChimerSeq STARFusion TCGA_RNA-Seq GPATCH1-FCGRT GPATCH1 chr19 33610023 + FCGRT chr19 50027764 + Exonic hg19 STAD TCGA-HU-A4HD-01A 56 16 In-Frame Intra-chr q13.11 q13.33 Seq+ 48142 ChimerSeq STARFusion TCGA_RNA-Seq PADI2-EXD3 PADI2 chr1 17422404 - EXD3 chr9 140218595 - Exonic hg19 STAD TCGA-HU-A4HD-01A 50 18 In-Frame Inter-chr p36.13 q34.3 Seq+ 48143 ChimerSeq STARFusion TCGA_RNA-Seq ABCC3-DHDH ABCC3 chr17 48712342 + DHDH chr19 49438257 + Exonic hg19 STAD TCGA-HU-A4HD-01A 46 8 In-Frame Inter-chr q21.33 q13.33 Seq+ 48144 ChimerSeq STARFusion TCGA_RNA-Seq CLDN7-UTS2R CLDN7 chr17 7165140 - UTS2R chr17 80332119 + Exonic hg19 STAD TCGA-HU-A4HD-01A 35 36 CDS-5'UTR Intra-chr p13.1 q25.3 Seq+ 48145 ChimerSeq STARFusion TCGA_RNA-Seq CLDN7-UTS2R CLDN7 chr17 7164018 - UTS2R chr17 80332119 + Exonic hg19 STAD TCGA-HU-A4HD-01A 26 36 Out-of-frame Intra-chr p13.1 q25.3 Seq+ 48146 ChimerSeq STARFusion TCGA_RNA-Seq CCDC82-MTMR2 CCDC82 chr11 96104177 - MTMR2 chr11 95583913 - Exonic hg19 STAD TCGA-HU-A4HD-01A 32 8 In-Frame Intra-chr q21 q21 Seq+ 48147 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H12C-SIDT2 ZC3H12C chr11 110036402 + SIDT2 chr11 117056787 + Exonic hg19 STAD TCGA-HU-A4HD-01A 25 7 Out-of-frame Intra-chr q22.3 q23.3 Seq+ 48148 ChimerSeq STARFusion TCGA_RNA-Seq SCAF8-TIAM2 SCAF8 chr6 155152274 + TIAM2 chr6 155265250 + Exonic hg19 STAD TCGA-HU-A4HD-01A 23 1 CDS-5'UTR Intra-chr q25.2 q25.2 48149 ChimerSeq STARFusion TCGA_RNA-Seq SMURF2-PUM2 SMURF2 chr17 62574610 - PUM2 chr2 20460227 - Exonic hg19 STAD TCGA-HU-A4HD-01A 19 5 In-Frame Inter-chr q24.1 p24.1 Seq+ 48150 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R12A-PAWR PPP1R12A chr12 80266588 - PAWR chr12 80014987 - Exonic hg19 STAD TCGA-HU-A4HD-01A 18 6 Out-of-frame Intra-chr q21.31 q21.2 Tumor suppressor gene 48151 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R12A-PAWR PPP1R12A chr12 80187643 - PAWR chr12 80014987 - Exonic hg19 STAD TCGA-HU-A4HD-01A 12 6 In-Frame Intra-chr q21.31 q21.2 Tumor suppressor gene 48152 ChimerSeq STARFusion TCGA_RNA-Seq FAM96A-CSNK1G1 FAM96A chr15 64380886 - CSNK1G1 chr15 64592922 - Exonic hg19 STAD TCGA-HU-A4HD-01A 11 7 CDS-5'UTR Intra-chr q22.31 q22.31 Seq+ 48153 ChimerSeq STARFusion TCGA_RNA-Seq PADI2-EXD3 PADI2 chr1 17422404 - EXD3 chr9 140218308 - Exonic hg19 STAD TCGA-HU-A4HD-01A 7 17 In-Frame Inter-chr p36.13 q34.3 Seq+ 48154 ChimerSeq STARFusion TCGA_RNA-Seq AXIN1-MRPL28 AXIN1 chr16 402369 - MRPL28 chr16 418635 - Exonic hg19 STAD TCGA-VQ-A8PJ-01A 45 5 5'UTR-CDS Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 48155 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-MX1 TMPRSS2 chr21 42845252 - MX1 chr21 42802460 + Exonic hg19 STAD TCGA-VQ-A8PJ-01A 35 3 CDS-5'UTR Intra-chr q22.3 q22.3 Seq+ 48156 ChimerSeq STARFusion TCGA_RNA-Seq AKAP8-RPL28 AKAP8 chr19 15466118 - RPL28 chr19 55897718 + Exonic hg19 STAD TCGA-VQ-A8PJ-01A 32 4 CDS-5'UTR Intra-chr p13.12 Transcription factor q13.42 Seq+ 48157 ChimerSeq STARFusion TCGA_RNA-Seq DDX5-SKAP1 DDX5 chr17 62496667 - SKAP1 chr17 46474147 - Exonic hg19 STAD TCGA-VQ-A8PJ-01A 25 0 In-Frame Intra-chr q23.3 q21.32 Seq+ 48158 ChimerSeq STARFusion TCGA_RNA-Seq AKAP8-RPL28 AKAP8 chr19 15465660 - RPL28 chr19 55897718 + Exonic hg19 STAD TCGA-VQ-A8PJ-01A 15 4 3'UTR-5'UTR Intra-chr p13.12 Transcription factor q13.42 Seq+ 48159 ChimerSeq STARFusion TCGA_RNA-Seq SMARCA4-CARM1 SMARCA4 chr19 11100119 + CARM1 chr19 11022860 + Exonic hg19 STAD TCGA-VQ-A91K-01A 253 42 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 48160 ChimerSeq STARFusion TCGA_RNA-Seq TMEM59-SSBP3 TMEM59 chr1 54502283 - SSBP3 chr1 54722859 - Exonic hg19 STAD TCGA-VQ-A91K-01A 153 60 In-Frame Intra-chr p32.3 p32.3 Seq+ 48161 ChimerSeq STARFusion TCGA_RNA-Seq SLC3A1-PPM1B SLC3A1 chr2 44513296 + PPM1B chr2 44471367 + Exonic hg19 STAD TCGA-VQ-A91K-01A 156 19 CDS-3'UTR Intra-chr p21 p21 48162 ChimerSeq STARFusion TCGA_RNA-Seq TMEM59-SSBP3 TMEM59 chr1 54502283 - SSBP3 chr1 54723822 - Exonic hg19 STAD TCGA-VQ-A91K-01A 141 21 In-Frame Intra-chr p32.3 p32.3 Seq+ 48163 ChimerSeq STARFusion TCGA_RNA-Seq FAM162A-CASR FAM162A chr3 122103146 + CASR chr3 121994659 + Exonic hg19 STAD TCGA-VQ-A91K-01A 38 7 Out-of-frame Intra-chr q21.1 q13.33 Seq+ 48164 ChimerSeq STARFusion TCGA_RNA-Seq CASP10-CFLAR CASP10 chr2 202052522 + CFLAR chr2 202010101 + Exonic hg19 STAD TCGA-VQ-A91K-01A 38 3 In-Frame Intra-chr q33.1 q33.1 Seq+ 48165 ChimerSeq STARFusion TCGA_RNA-Seq TMEM59-SSBP3 TMEM59 chr1 54502283 - SSBP3 chr1 54717533 - Exonic hg19 STAD TCGA-VQ-A91K-01A 22 60 In-Frame Intra-chr p32.3 p32.3 Seq+ 48166 ChimerSeq STARFusion TCGA_RNA-Seq RCOR1-TECPR2 RCOR1 chr14 103059662 + TECPR2 chr14 102963316 + Exonic hg19 STAD TCGA-VQ-A91K-01A 34 5 Out-of-frame Intra-chr q32.31 q32.31 Seq+ 48167 ChimerSeq STARFusion TCGA_RNA-Seq KMT2E-LHFPL3 KMT2E chr7 104722244 + LHFPL3 chr7 104377122 + Exonic hg19 STAD TCGA-VQ-A91K-01A 34 2 Out-of-frame Intra-chr q22.3 q22.2 48168 ChimerSeq STARFusion TCGA_RNA-Seq RPH3AL-VPS53 RPH3AL chr17 199048 - VPS53 chr17 465984 - Exonic hg19 STAD TCGA-VQ-A91K-01A 33 1 Out-of-frame Intra-chr Tumor suppressor gene 48169 ChimerSeq STARFusion TCGA_RNA-Seq VSIG1-MID2 VSIG1 chrX 107301431 + MID2 chrX 107159232 + Exonic hg19 STAD TCGA-VQ-A91K-01A 30 2 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 48170 ChimerSeq STARFusion TCGA_RNA-Seq ARAP1-FCHSD2 ARAP1 chr11 72406025 - FCHSD2 chr11 72579071 - Exonic hg19 STAD TCGA-VQ-A91K-01A 23 1 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 48171 ChimerSeq STARFusion TCGA_RNA-Seq ATAD3A-VWA1 ATAD3A chr1 1469696 + VWA1 chr1 1377601 + Exonic hg19 STAD TCGA-VQ-A91K-01A 17 10 Out-of-frame Intra-chr p36.33 p36.33 48172 ChimerSeq STARFusion TCGA_RNA-Seq BRE-GPN1 BRE chr2 28152775 + GPN1 chr2 27852726 + Exonic hg19 STAD TCGA-VQ-A91K-01A 14 1 Out-of-frame Intra-chr p23.3 Seq+ 48173 ChimerSeq STARFusion TCGA_RNA-Seq BRE-ZNF512 BRE chr2 28152775 + ZNF512 chr2 27852726 + Exonic hg19 STAD TCGA-VQ-A91K-01A 14 1 CDS-3'UTR Intra-chr p23.3 Transcription factor 48174 ChimerSeq STARFusion TCGA_RNA-Seq MRPL33-GPN1 MRPL33 chr2 28152775 + GPN1 chr2 27852726 + Exonic hg19 STAD TCGA-VQ-A91K-01A 14 1 3'UTR-CDS Intra-chr p23.2 p23.3 48175 ChimerSeq STARFusion TCGA_RNA-Seq MRPL33-ZNF512 MRPL33 chr2 28152775 + ZNF512 chr2 27852726 + Exonic hg19 STAD TCGA-VQ-A91K-01A 14 1 Out-of-frame Intra-chr p23.2 p23.3 Transcription factor Seq+ 48176 ChimerSeq STARFusion TCGA_RNA-Seq TACC2-ZNF365 TACC2 chr10 123903221 + ZNF365 chr10 64219500 + Exonic hg19 STAD TCGA-BR-8368-01A 18 14 Out-of-frame Intra-chr q26.13 q21.2 Transcription factor Seq+ 48177 ChimerSeq STARFusion TCGA_RNA-Seq TACC2-ZNF365 TACC2 chr10 123892249 + ZNF365 chr10 64219500 + Exonic hg19 STAD TCGA-BR-8368-01A 5 14 Out-of-frame Intra-chr q26.13 q21.2 Transcription factor Seq+ 48178 ChimerSeq STARFusion TCGA_RNA-Seq TACC2-ZNF365 TACC2 chr10 123903221 + ZNF365 chr10 64239635 + Exonic hg19 STAD TCGA-BR-8368-01A 2 14 Out-of-frame Intra-chr q26.13 q21.2 Transcription factor Seq+ 48179 ChimerSeq STARFusion TCGA_RNA-Seq TACC2-ZNF365 TACC2 chr10 123872748 + ZNF365 chr10 64219500 + Exonic hg19 STAD TCGA-BR-8368-01A 2 14 5'UTR-CDS Intra-chr q26.13 q21.2 Transcription factor Seq+ 48180 ChimerSeq STARFusion TCGA_RNA-Seq TACC2-ZNF365 TACC2 chr10 123892249 + ZNF365 chr10 64382863 + Exonic hg19 STAD TCGA-BR-8368-01A 2 14 Out-of-frame Intra-chr q26.13 q21.2 Transcription factor Seq+ 48181 ChimerSeq STARFusion TCGA_RNA-Seq BCAR1-PGA3 BCAR1 chr16 75297845 - PGA3 chr11 60978559 + Exonic hg19 STAD TCGA-BR-6710-01A 31 0 Out-of-frame Inter-chr q23.1 q12.2 48182 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA4 LIPF chr10 90429618 + PGA4 chr11 60989825 + Exonic hg19 STAD TCGA-BR-6710-01A 24 5 Out-of-frame Inter-chr q23.31 q12.2 48183 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA4 LIPF chr10 90436036 + PGA4 chr11 61017220 + Exonic hg19 STAD TCGA-BR-6710-01A 21 5 Out-of-frame Inter-chr q23.31 q12.2 48184 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA4 LIPF chr10 90429691 + PGA4 chr11 60989821 + Exonic hg19 STAD TCGA-BR-6710-01A 17 5 CDS-5'UTR Inter-chr q23.31 q12.2 48185 ChimerSeq STARFusion TCGA_RNA-Seq C19orf47-PGA3 C19orf47 chr19 40825882 - PGA3 chr11 60971579 + Exonic hg19 STAD TCGA-BR-6710-01A 15 0 3'UTR-CDS Inter-chr q13.2 q12.2 48186 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-PGA4 IGKC chr2 89156832 - PGA4 chr11 60989826 + Exonic hg19 STAD TCGA-BR-6710-01A 13 3 Out-of-frame Inter-chr p11.2 q12.2 48187 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA4 LIPF chr10 90438250 + PGA4 chr11 61015909 + Exonic hg19 STAD TCGA-BR-6710-01A 6 5 Out-of-frame Inter-chr q23.31 q12.2 48188 ChimerSeq STARFusion TCGA_RNA-Seq LIPF-PGA4 LIPF chr10 90438225 + PGA4 chr11 60990553 + Exonic hg19 STAD TCGA-BR-6710-01A 3 5 Out-of-frame Inter-chr q23.31 q12.2 48189 ChimerSeq STARFusion TCGA_RNA-Seq C9orf72-MOB3B C9orf72 chr9 27548555 - MOB3B chr9 27359234 - Exonic hg19 STAD TCGA-BR-6710-01A 2 0 Out-of-frame Intra-chr p21.2 p21.2 48190 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1G3-G3BP1 CSNK1G3 chr5 122848264 + G3BP1 chr5 151166164 + Exonic hg19 STAD TCGA-BR-6710-01A 2 0 5'UTR-5'UTR Intra-chr q23.2 q33.1 48191 ChimerSeq STARFusion TCGA_RNA-Seq KLHL28-FAM179B KLHL28 chr14 45400536 - FAM179B chr14 45481178 + Exonic hg19 STAD TCGA-BR-6710-01A 2 0 Out-of-frame Intra-chr q21.2 48192 ChimerSeq STARFusion TCGA_RNA-Seq ZNF564-CNOT6 ZNF564 chr19 12662144 - CNOT6 chr5 179956275 + Exonic hg19 STAD TCGA-BR-6710-01A 2 0 CDS-5'UTR Inter-chr p13.2 Transcription factor q35.3 48193 ChimerSeq STARFusion TCGA_RNA-Seq CAMK2N2-IGH@ CAMK2N2 chr3 183977380 - IGH@ chr14 106330054 - Exonic hg19 STAD TCGA-IN-AB1X-01A 214 0 Out-of-frame Inter-chr q27.1 32.33 48194 ChimerSeq STARFusion TCGA_RNA-Seq CAMK2N2-IGHJ5 CAMK2N2 chr3 183977380 - IGHJ5 chr14 106330054 - Exonic hg19 STAD TCGA-IN-AB1X-01A 214 0 Out-of-frame Inter-chr q27.1 48195 ChimerSeq STARFusion TCGA_RNA-Seq CAMK2N2-IGHM CAMK2N2 chr3 183977380 - IGHM chr14 106330054 - Exonic hg19 STAD TCGA-IN-AB1X-01A 214 0 Out-of-frame Inter-chr q27.1 q32.33 48196 ChimerSeq STARFusion TCGA_RNA-Seq WARS-EPB41L4B WARS chr14 100835424 - EPB41L4B chr9 111979425 - Exonic hg19 STAD TCGA-IN-AB1X-01A 126 22 Out-of-frame Inter-chr q32.2 q31.3 Seq+ 48197 ChimerSeq STARFusion TCGA_RNA-Seq SPTLC2-DIAPH3 SPTLC2 chr14 78043110 - DIAPH3 chr13 60348957 - Exonic hg19 STAD TCGA-IN-AB1X-01A 80 26 In-Frame Inter-chr q24.3 q21.2 Seq+ 48198 ChimerSeq STARFusion TCGA_RNA-Seq CAMK2N2-IGH@ CAMK2N2 chr3 183977380 - IGH@ chr14 106331647 - Exonic hg19 STAD TCGA-IN-AB1X-01A 79 0 Out-of-frame Inter-chr q27.1 32.33 48199 ChimerSeq STARFusion TCGA_RNA-Seq CAMK2N2-IGHJ1 CAMK2N2 chr3 183977380 - IGHJ1 chr14 106331647 - Exonic hg19 STAD TCGA-IN-AB1X-01A 79 0 Out-of-frame Inter-chr q27.1 48200 ChimerSeq STARFusion TCGA_RNA-Seq CAMK2N2-IGHM CAMK2N2 chr3 183977380 - IGHM chr14 106331647 - Exonic hg19 STAD TCGA-IN-AB1X-01A 79 0 Out-of-frame Inter-chr q27.1 q32.33 48201 ChimerSeq STARFusion TCGA_RNA-Seq KLHL28-TRAC KLHL28 chr14 45431049 - TRAC chr14 23018582 + Exonic hg19 STAD TCGA-IN-AB1X-01A 39 19 Out-of-frame Intra-chr q21.2 q11.2 48202 ChimerSeq STARFusion TCGA_RNA-Seq WARS-EPB41L4B WARS chr14 100841620 - EPB41L4B chr9 111979425 - Exonic hg19 STAD TCGA-IN-AB1X-01A 16 22 5'UTR-CDS Inter-chr q32.2 q31.3 Seq+ 48203 ChimerSeq STARFusion TCGA_RNA-Seq KLHL28-TRAC KLHL28 chr14 45430800 - TRAC chr14 23018582 + Exonic hg19 STAD TCGA-IN-AB1X-01A 14 19 Out-of-frame Intra-chr q21.2 q11.2 48204 ChimerSeq STARFusion TCGA_RNA-Seq HECTD1-CNOT1 HECTD1 chr14 31574589 - CNOT1 chr16 58594266 - Exonic hg19 STAD TCGA-IN-AB1X-01A 12 2 Out-of-frame Inter-chr q12 q21 Seq+ 48205 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142481912 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-CD-A48A-01A 32 0 3'UTR-CDS Inter-chr q13.41 48206 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142471340 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-CD-A48A-01A 30 0 3'UTR-CDS Inter-chr q13.41 48207 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142460418 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-CD-A48A-01A 30 0 In-Frame Inter-chr q13.41 48208 ChimerSeq STARFusion TCGA_RNA-Seq FAM193A-HTT FAM193A chr4 2702271 + HTT chr4 3190678 + Exonic hg19 STAD TCGA-CD-A48A-01A 13 3 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 48209 ChimerSeq STARFusion TCGA_RNA-Seq RNF216P1-WIPI2 RNF216P1 chr7 5023406 + WIPI2 chr7 5256723 + Exonic hg19 STAD TCGA-CD-A48A-01A 10 12 Out-of-frame Intra-chr p22.1 p22.1 48210 ChimerSeq STARFusion TCGA_RNA-Seq MTATP6P1-MTND1P23 MTATP6P1 chr1 569579 + MTND1P23 chr1 564706 + Exonic hg19 STAD TCGA-CD-A48A-01A 3 24 Out-of-frame Intra-chr p36.33 p36.33 48211 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-ANAPC10 IGH@ chr14 107170321 - ANAPC10 chr4 146018979 - Exonic hg19 STAD TCGA-CG-5716-01A 34 0 Out-of-frame Inter-chr 32.33 q31.21 48212 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-IGH@ RCC1 chr1 28832596 + IGH@ chr14 106173768 - Exonic hg19 STAD TCGA-CG-5716-01A 32 0 Out-of-frame Inter-chr p35.3 32.33 48213 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-IGHA1 RCC1 chr1 28832596 + IGHA1 chr14 106173768 - Exonic hg19 STAD TCGA-CG-5716-01A 32 0 Out-of-frame Inter-chr p35.3 Seq+ 48214 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-IGH@ SNHG3 chr1 28832596 + IGH@ chr14 106173768 - Exonic hg19 STAD TCGA-CG-5716-01A 32 0 Out-of-frame Inter-chr p35.3 32.33 48215 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-IGHA1 SNHG3 chr1 28832596 + IGHA1 chr14 106173768 - Exonic hg19 STAD TCGA-CG-5716-01A 32 0 Out-of-frame Inter-chr p35.3 Seq+ 48216 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-IGH@ RCC1 chr1 28832596 + IGH@ chr14 106053537 - Exonic hg19 STAD TCGA-CG-5716-01A 31 0 Out-of-frame Inter-chr p35.3 32.33 48217 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-IGH@ SNHG3 chr1 28832596 + IGH@ chr14 106053537 - Exonic hg19 STAD TCGA-CG-5716-01A 31 0 Out-of-frame Inter-chr p35.3 32.33 48218 ChimerSeq STARFusion TCGA_RNA-Seq SUB1-OSMR SUB1 chr5 32591791 + OSMR chr5 38944303 + Exonic hg19 STAD TCGA-HU-8244-01A 4 2 CDS-3'UTR Intra-chr p13.3 p13.1 48219 ChimerSeq STARFusion TCGA_RNA-Seq MRPS27-CALM2 MRPS27 chr5 71516880 - CALM2 chr2 47389700 - Exonic hg19 STAD TCGA-HU-8244-01A 3 0 Out-of-frame Inter-chr q13.2 p21 48220 ChimerSeq STARFusion TCGA_RNA-Seq REG1A-DDX52 REG1A chr2 79350526 + DDX52 chr17 35985986 - Exonic hg19 STAD TCGA-HU-8244-01A 3 0 Out-of-frame Inter-chr p12 q12 48221 ChimerSeq STARFusion TCGA_RNA-Seq APOA1BP-HID1 APOA1BP chr1 156562001 + HID1 chr17 72954858 - Exonic hg19 STAD TCGA-HU-8244-01A 2 0 Out-of-frame Inter-chr q25.1 48222 ChimerSeq STARFusion TCGA_RNA-Seq BMP4-LRR1 BMP4 chr14 54423268 - LRR1 chr14 50069088 + Exonic hg19 STAD TCGA-HU-8244-01A 2 0 5'UTR-5'UTR Intra-chr q22.2 Tumor suppressor gene q21.3 48223 ChimerSeq STARFusion TCGA_RNA-Seq BTBD3-XKR6 BTBD3 chr20 11871602 + XKR6 chr8 10971602 - Exonic hg19 STAD TCGA-HU-8244-01A 2 0 5'UTR-CDS Inter-chr p12.2 p23.1 48224 ChimerSeq STARFusion TCGA_RNA-Seq CELF1-CPSF7 CELF1 chr11 47574544 - CPSF7 chr11 61196762 - Exonic hg19 STAD TCGA-HU-8244-01A 2 0 5'UTR-5'UTR Intra-chr p11.2 q12.2 48225 ChimerSeq STARFusion TCGA_RNA-Seq CLDND1-PLCH1 CLDND1 chr3 98241693 - PLCH1 chr3 155422053 - Exonic hg19 STAD TCGA-HU-8244-01A 2 0 5'UTR-5'UTR Intra-chr q11.2 q25.31 48226 ChimerSeq STARFusion TCGA_RNA-Seq CPEB2-ATP8A1 CPEB2 chr4 15009210 + ATP8A1 chr4 42509171 - Exonic hg19 STAD TCGA-HU-8244-01A 2 0 In-Frame Intra-chr p13 48227 ChimerSeq STARFusion TCGA_RNA-Seq IP6K2-QRICH1 IP6K2 chr3 48754590 - QRICH1 chr3 49095323 - Exonic hg19 STAD TCGA-HU-8244-01A 2 0 5'UTR-CDS Intra-chr p21.31 p21.31 48228 ChimerSeq STARFusion TCGA_RNA-Seq SGPP2-ACSL3 SGPP2 chr2 223289540 + ACSL3 chr2 223752548 + Exonic hg19 STAD TCGA-HU-8244-01A 2 0 CDS-5'UTR Intra-chr q36.1 q36.1 48229 ChimerSeq STARFusion TCGA_RNA-Seq WDR45B-RAB40B WDR45B chr17 80601825 - RAB40B chr17 80622432 - Exonic hg19 STAD TCGA-VQ-A928-01A 89 16 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 48230 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-TRAP1 CREBBP chr16 3841982 - TRAP1 chr16 3740986 - Exonic hg19 STAD TCGA-VQ-A928-01A 68 13 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 48231 ChimerSeq STARFusion TCGA_RNA-Seq RCOR1-AMN RCOR1 chr14 103059662 + AMN chr14 103390048 + Exonic hg19 STAD TCGA-VQ-A928-01A 44 33 In-Frame Intra-chr q32.31 q32.32 Seq+ 48232 ChimerSeq STARFusion TCGA_RNA-Seq HIP1R-C12orf65 HIP1R chr12 123344377 + C12orf65 chr12 123738194 + Exonic hg19 STAD TCGA-VQ-A928-01A 34 12 CDS-5'UTR Intra-chr q24.31 q24.31 Seq+ 48233 ChimerSeq STARFusion TCGA_RNA-Seq CBX5-SMUG1 CBX5 chr12 54673792 - SMUG1 chr12 54565893 - Exonic hg19 STAD TCGA-VQ-A928-01A 26 18 5'UTR-3'UTR Intra-chr q13.13 Tumor suppressor gene q13.13 Oncogene Seq+ 48234 ChimerSeq STARFusion TCGA_RNA-Seq INTS4-NARS2 INTS4 chr11 77690042 - NARS2 chr11 78154804 - Exonic hg19 STAD TCGA-VQ-A928-01A 27 3 In-Frame Intra-chr q14.1 q14.1 Seq+ 48235 ChimerSeq STARFusion TCGA_RNA-Seq BORA-PIBF1 BORA chr13 73312181 + PIBF1 chr13 73539412 + Exonic hg19 STAD TCGA-VQ-A928-01A 24 5 Out-of-frame Intra-chr q21.33 q21.33 Seq+ 48236 ChimerSeq STARFusion TCGA_RNA-Seq UBTF-PYY UBTF chr17 42295540 - PYY chr17 42043900 - Exonic hg19 STAD TCGA-VQ-A928-01A 23 9 CDS-5'UTR Intra-chr q21.31 q21.31 Seq+ 48237 ChimerSeq STARFusion TCGA_RNA-Seq PMPCB-WWOX PMPCB chr7 102939155 + WWOX chr16 79245505 + Exonic hg19 STAD TCGA-VQ-A928-01A 22 2 In-Frame Inter-chr q22.1 q23.1 Tumor suppressor gene Seq+ 48238 ChimerSeq STARFusion TCGA_RNA-Seq BRD4-NOTCH3 BRD4 chr19 15443101 - NOTCH3 chr19 15281636 - Exonic hg19 STAD TCGA-VQ-A928-01A 21 4 5'UTR-CDS Intra-chr p13.12 Atypical:BRD p13.12 Oncogene Tumor suppressor gene Seq+ 48239 ChimerSeq STARFusion TCGA_RNA-Seq CUL4A-MCF2L CUL4A chr13 113864089 + MCF2L chr13 113750685 + Exonic hg19 STAD TCGA-VQ-A928-01A 21 3 Out-of-frame Intra-chr q34 q34 Seq+ 48240 ChimerSeq STARFusion TCGA_RNA-Seq RCOR1-AMN RCOR1 chr14 103059662 + AMN chr14 103390272 + Exonic hg19 STAD TCGA-VQ-A928-01A 13 32 Out-of-frame Intra-chr q32.31 q32.32 Seq+ 48241 ChimerSeq STARFusion TCGA_RNA-Seq C16orf62-IQCK C16orf62 chr16 19702793 + IQCK chr16 19838348 + Exonic hg19 STAD TCGA-VQ-A928-01A 17 9 In-Frame Intra-chr p12.3 p12.3 48242 ChimerSeq STARFusion TCGA_RNA-Seq RTN3-COX8A RTN3 chr11 63449250 + COX8A chr11 63743697 + Exonic hg19 STAD TCGA-VQ-A928-01A 18 5 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 48243 ChimerSeq STARFusion TCGA_RNA-Seq NCOA2-TRAM1 NCOA2 chr8 71208979 - TRAM1 chr8 71512317 - Exonic hg19 STAD TCGA-VQ-A928-01A 15 3 5'UTR-CDS Intra-chr q13.3 Oncogene Transcription factor q13.3 48244 ChimerSeq STARFusion TCGA_RNA-Seq CASC3-DNAJC8 CASC3 chr17 38297860 + DNAJC8 chr1 28555534 - Exonic hg19 STAD TCGA-VQ-A928-01A 15 2 In-Frame Inter-chr q21.1 p35.3 48245 ChimerSeq STARFusion TCGA_RNA-Seq TMEM204-HN1L TMEM204 chr16 1578797 + HN1L chr16 1735440 + Exonic hg19 STAD TCGA-VQ-A928-01A 14 5 5'UTR-CDS Intra-chr p13.3 Seq+ 48246 ChimerSeq STARFusion TCGA_RNA-Seq SMEK1-CCDC88C SMEK1 chr14 91951976 - CCDC88C chr14 91739997 - Exonic hg19 STAD TCGA-VQ-A928-01A 14 4 In-Frame Intra-chr q32.12 48247 ChimerSeq STARFusion TCGA_RNA-Seq SSH1-CORO1C SSH1 chr12 109186062 - CORO1C chr12 109055934 - Exonic hg19 STAD TCGA-VQ-A928-01A 10 5 In-Frame Intra-chr q24.11 q24.11 48248 ChimerSeq STARFusion TCGA_RNA-Seq BAZ2A-PTGES3 BAZ2A chr12 57023909 - PTGES3 chr12 57060050 - Exonic hg19 STAD TCGA-VQ-A928-01A 10 3 Out-of-frame Intra-chr q13.3 Transcription factor q13.3 Seq+ 48249 ChimerSeq STARFusion TCGA_RNA-Seq EP300-ZC3H7B EP300 chr22 41569788 + ZC3H7B chr22 41716659 + Exonic hg19 STAD TCGA-VQ-A928-01A 9 5 CDS-5'UTR Intra-chr q13.2 Oncogene q13.2 Seq+ 48250 ChimerSeq STARFusion TCGA_RNA-Seq UCKL1-ZBTB46 UCKL1 chr20 62572303 - ZBTB46 chr20 62422143 - Exonic hg19 STAD TCGA-VQ-A928-01A 9 5 CDS-5'UTR Intra-chr q13.33 q13.33 Transcription factor Seq+ 48251 ChimerSeq STARFusion TCGA_RNA-Seq STK24-SLC15A1 STK24 chr13 99228999 - SLC15A1 chr13 99379113 - Exonic hg19 STAD TCGA-VQ-A928-01A 7 7 Out-of-frame Intra-chr q32.2 q32.3 Seq+ 48252 ChimerSeq STARFusion TCGA_RNA-Seq RPL13P12-PNMA2 RPL13P12 chr17 17286669 - PNMA2 chr8 26364477 - Exonic hg19 STAD TCGA-RD-A8N0-01A 24 0 Out-of-frame Inter-chr p21.2 48253 ChimerSeq STARFusion TCGA_RNA-Seq FBXO44-IGHJ5 FBXO44 chr1 11721290 + IGHJ5 chr14 106330068 - Exonic hg19 STAD TCGA-RD-A8N0-01A 13 0 Out-of-frame Inter-chr p36.22 48254 ChimerSeq STARFusion TCGA_RNA-Seq FBXO44-IGHM FBXO44 chr1 11721290 + IGHM chr14 106330068 - Exonic hg19 STAD TCGA-RD-A8N0-01A 13 0 Out-of-frame Inter-chr p36.22 q32.33 48255 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-HAUS8 CEACAM5 chr19 42233234 + HAUS8 chr19 17184668 - Exonic hg19 STAD TCGA-D7-5577-01A 5 0 Out-of-frame Intra-chr q13.2 p13.11 48256 ChimerSeq STARFusion TCGA_RNA-Seq HSPBP1-GRK5 HSPBP1 chr19 55790902 - GRK5 chr10 120967223 + Exonic hg19 STAD TCGA-D7-5577-01A 4 0 Out-of-frame Inter-chr q13.42 q26.11 48257 ChimerSeq STARFusion TCGA_RNA-Seq CFL1-IFI27 CFL1 chr11 65622486 - IFI27 chr14 94582791 + Exonic hg19 STAD TCGA-D7-5577-01A 3 1 Out-of-frame Inter-chr q13.1 q32.12 48258 ChimerSeq STARFusion TCGA_RNA-Seq GAPDH-MAN1C1 GAPDH chr12 6647524 + MAN1C1 chr1 26112407 + Exonic hg19 STAD TCGA-D7-5577-01A 3 0 Out-of-frame Inter-chr p13.31 p36.11 48259 ChimerSeq STARFusion TCGA_RNA-Seq HSP90AB1-PGD HSP90AB1 chr6 44218135 + PGD chr1 10471475 + Exonic hg19 STAD TCGA-D7-5577-01A 3 0 In-Frame Inter-chr p21.1 Oncogene p36.22 48260 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-GNAS YWHAE chr17 1303341 - GNAS chr20 57470667 + Exonic hg19 STAD TCGA-D7-5577-01A 3 0 In-Frame Inter-chr p13.3 q13.32 Oncogene 48261 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-CERCAM ACTB chr7 5567364 - CERCAM chr9 131186417 + Exonic hg19 STAD TCGA-D7-5577-01A 2 0 3'UTR-CDS Inter-chr p22.1 q34.11 48262 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V0A2-RBCK1 ATP6V0A2 chr12 124221818 + RBCK1 chr20 407957 + Exonic hg19 STAD TCGA-D7-5577-01A 2 0 In-Frame Inter-chr q24.31 p13 Transcription factor 48263 ChimerSeq STARFusion TCGA_RNA-Seq ATRX-REPS2 ATRX chrX 76776266 - REPS2 chrX 17151947 + Exonic hg19 STAD TCGA-D7-5577-01A 2 0 In-Frame Intra-chr q21.1 Oncogene p22.2 48264 ChimerSeq STARFusion TCGA_RNA-Seq BEND7-CDK10 BEND7 chr10 13522899 - CDK10 chr16 89755660 + Exonic hg19 STAD TCGA-D7-5577-01A 2 0 Out-of-frame Inter-chr p13 q24.3 CMGC:CDK 48265 ChimerSeq STARFusion TCGA_RNA-Seq DAB2IP-TGM2 DAB2IP chr9 124414178 + TGM2 chr20 36760902 - Exonic hg19 STAD TCGA-D7-5577-01A 2 0 5'UTR-CDS Inter-chr q33.2 Tumor suppressor gene q11.23 48266 ChimerSeq STARFusion TCGA_RNA-Seq DENND1A-RABGAP1 DENND1A chr9 126429305 - RABGAP1 chr9 125827627 + Exonic hg19 STAD TCGA-D7-5577-01A 2 0 In-Frame Intra-chr q33.3 q33.2 48267 ChimerSeq STARFusion TCGA_RNA-Seq EIF3H-ANKH EIF3H chr8 117767905 - ANKH chr5 14716944 - Exonic hg19 STAD TCGA-D7-5577-01A 2 0 In-Frame Inter-chr q24.11 p15.2 48268 ChimerSeq STARFusion TCGA_RNA-Seq IFI6-PRDX2 IFI6 chr1 27994737 - PRDX2 chr19 12907980 - Exonic hg19 STAD TCGA-D7-5577-01A 2 0 In-Frame Inter-chr p35.3 p13.13 48269 ChimerSeq STARFusion TCGA_RNA-Seq ING3-SHARPIN ING3 chr7 120595678 + SHARPIN chr8 145158128 - Exonic hg19 STAD TCGA-D7-5577-01A 2 0 In-Frame Inter-chr q31.31 Tumor suppressor gene q24.3 48270 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-LRRC37A3 KANSL1 chr17 44248221 - LRRC37A3 chr17 62894577 - Exonic hg19 STAD TCGA-D7-5577-01A 2 0 CDS-5'UTR Intra-chr q24.1 48271 ChimerSeq STARFusion TCGA_RNA-Seq LDLR-KANK2 LDLR chr19 11200291 + KANK2 chr19 11289396 - Exonic hg19 STAD TCGA-D7-5577-01A 2 0 In-Frame Intra-chr p13.2 p13.2 48272 ChimerSeq STARFusion TCGA_RNA-Seq LDLRAD4-VAV3 LDLRAD4 chr18 13484118 + VAV3 chr1 108160254 - Exonic hg19 STAD TCGA-D7-5577-01A 2 0 Out-of-frame Inter-chr p11.21 p13.3 48273 ChimerSeq STARFusion TCGA_RNA-Seq MON1A-EIF3D MON1A chr3 49967042 - EIF3D chr22 36922178 - Exonic hg19 STAD TCGA-D7-5577-01A 2 0 CDS-5'UTR Inter-chr p21.31 q12.3 48274 ChimerSeq STARFusion TCGA_RNA-Seq MON2-BIRC6 MON2 chr12 62878013 + BIRC6 chr2 32800223 + Exonic hg19 STAD TCGA-D7-5577-01A 2 0 In-Frame Inter-chr q14.1 p22.3 48275 ChimerSeq STARFusion TCGA_RNA-Seq NCOA7-CLCC1 NCOA7 chr6 126243980 + CLCC1 chr1 109472826 - Exonic hg19 STAD TCGA-D7-5577-01A 2 0 CDS-3'UTR Inter-chr q22.31 p13.3 48276 ChimerSeq STARFusion TCGA_RNA-Seq PARD3-YY1AP1 PARD3 chr10 35103804 - YY1AP1 chr1 155657992 - Exonic hg19 STAD TCGA-D7-5577-01A 2 0 Out-of-frame Inter-chr p11.21 q22 48277 ChimerSeq STARFusion TCGA_RNA-Seq PPP2CA-HSPA4 PPP2CA chr5 133561451 - HSPA4 chr5 132400672 + Exonic hg19 STAD TCGA-D7-5577-01A 2 0 Out-of-frame Intra-chr q31.1 Tumor suppressor gene q31.1 48278 ChimerSeq STARFusion TCGA_RNA-Seq PRKCH-RTKN2 PRKCH chr14 61858006 + RTKN2 chr10 63944146 - Exonic hg19 STAD TCGA-D7-5577-01A 2 0 CDS-3'UTR Inter-chr q23.1 q21.2 48279 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-ANXA2 RCC1 chr1 28832596 + ANXA2 chr15 60678285 - Exonic hg19 STAD TCGA-D7-5577-01A 2 0 5'UTR-5'UTR Inter-chr p35.3 q22.2 Seq+ 48280 ChimerSeq STARFusion TCGA_RNA-Seq RDH13-QDPR RDH13 chr19 55575664 - QDPR chr4 17488859 - Exonic hg19 STAD TCGA-D7-5577-01A 2 0 5'UTR-CDS Inter-chr p15.32 48281 ChimerSeq STARFusion TCGA_RNA-Seq RPL37-CAPNS1 RPL37 chr5 40834283 - CAPNS1 chr19 36636878 + Exonic hg19 STAD TCGA-D7-5577-01A 2 0 Out-of-frame Inter-chr p13.1 q13.12 48282 ChimerSeq STARFusion TCGA_RNA-Seq RPS10-PKM RPS10 chr6 34392446 - PKM chr15 72492996 - Exonic hg19 STAD TCGA-D7-5577-01A 2 0 Out-of-frame Inter-chr p21.31 q23 48283 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KA2-VEGFC RPS6KA2 chr6 167040409 - VEGFC chr4 177609081 - Exonic hg19 STAD TCGA-D7-5577-01A 2 0 Out-of-frame Inter-chr q27 Oncogene Tumor suppressor gene q34.3 48284 ChimerSeq STARFusion TCGA_RNA-Seq SECISBP2-TPI1 SECISBP2 chr9 91934712 + TPI1 chr12 6978422 + Exonic hg19 STAD TCGA-D7-5577-01A 2 0 Out-of-frame Inter-chr q22.2 p13.31 48285 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-ANXA2 SNHG3 chr1 28832596 + ANXA2 chr15 60678285 - Exonic hg19 STAD TCGA-D7-5577-01A 2 0 5'UTR-5'UTR Inter-chr p35.3 q22.2 48286 ChimerSeq STARFusion TCGA_RNA-Seq SNRNP70-AFMID SNRNP70 chr19 49593777 + AFMID chr17 76198580 + Exonic hg19 STAD TCGA-D7-5577-01A 2 0 In-Frame Inter-chr q13.33 q25.3 48287 ChimerSeq STARFusion TCGA_RNA-Seq SPEN-SKI SPEN chr1 16174645 + SKI chr1 2234417 + Exonic hg19 STAD TCGA-D7-5577-01A 2 0 Out-of-frame Intra-chr p36.21 Transcription factor p36.33 Transcription factor 48288 ChimerSeq STARFusion TCGA_RNA-Seq VEZT-APPL2 VEZT chr12 95611662 + APPL2 chr12 105611503 - Exonic hg19 STAD TCGA-D7-5577-01A 2 0 In-Frame Intra-chr q22 Tumor suppressor gene q23.3 48289 ChimerSeq STARFusion TCGA_RNA-Seq VPS41-TAX1BP1 VPS41 chr7 38902145 - TAX1BP1 chr7 27867357 + Exonic hg19 STAD TCGA-D7-5577-01A 2 0 In-Frame Intra-chr p14.1 p15.2 48290 ChimerSeq STARFusion TCGA_RNA-Seq ZNF34-CCDC57 ZNF34 chr8 146005613 - CCDC57 chr17 80059742 - Exonic hg19 STAD TCGA-D7-5577-01A 2 0 Out-of-frame Inter-chr q24.3 Transcription factor q25.3 48291 ChimerSeq STARFusion TCGA_RNA-Seq GP2-LYZ GP2 chr16 20322540 - LYZ chr12 69747553 + Exonic hg19 STAD TCGA-VQ-A8PC-01A 51 29 Out-of-frame Inter-chr p12.3 q15 Seq+ 48292 ChimerSeq STARFusion TCGA_RNA-Seq CACYBPP2-RABGAP1L CACYBPP2 chr2 184472418 - RABGAP1L chr1 174957778 + Exonic hg19 STAD TCGA-VQ-A8PC-01A 42 6 Out-of-frame Inter-chr q32.1 q25.1 48293 ChimerSeq STARFusion TCGA_RNA-Seq ROR1-UBE2U ROR1 chr1 64516388 + UBE2U chr1 64707335 + Exonic hg19 STAD TCGA-VQ-A8PC-01A 27 6 Out-of-frame Intra-chr p31.3 TK:Ror p31.3 Seq+ 48294 ChimerSeq STARFusion TCGA_RNA-Seq LMO7-KLF12 LMO7 chr13 76210862 + KLF12 chr13 74289662 - Exonic hg19 STAD TCGA-VQ-A8PC-01A 23 7 5'UTR-CDS Intra-chr q22.2 q22.1 Transcription factor Seq+ 48295 ChimerSeq STARFusion TCGA_RNA-Seq GP2-LYZ GP2 chr16 20322470 - LYZ chr12 69747553 + Exonic hg19 STAD TCGA-VQ-A8PC-01A 13 28 Out-of-frame Inter-chr p12.3 q15 Seq+ 48296 ChimerSeq STARFusion TCGA_RNA-Seq GP2-LYZ GP2 chr16 20322482 - LYZ chr12 69747554 + Exonic hg19 STAD TCGA-VQ-A8PC-01A 12 28 Out-of-frame Inter-chr p12.3 q15 Seq+ 48297 ChimerSeq STARFusion TCGA_RNA-Seq GP2-LYZ GP2 chr16 20322383 - LYZ chr12 69747553 + Exonic hg19 STAD TCGA-VQ-A8PC-01A 7 28 Out-of-frame Inter-chr p12.3 q15 Seq+ 48298 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-GP2 LYZ chr12 69747259 + GP2 chr16 20322130 - Exonic hg19 STAD TCGA-VQ-A8PC-01A 7 25 Out-of-frame Inter-chr q15 p12.3 48299 ChimerSeq STARFusion TCGA_RNA-Seq CACYBPP2-RABGAP1L CACYBPP2 chr2 184472418 - RABGAP1L chr1 174958986 + Exonic hg19 STAD TCGA-VQ-A8PC-01A 11 6 Out-of-frame Inter-chr q32.1 q25.1 48300 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-GP2 LYZ chr12 69747265 + GP2 chr16 20322124 - Exonic hg19 STAD TCGA-VQ-A8PC-01A 6 25 Out-of-frame Inter-chr q15 p12.3 48301 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-GP2 LYZ chr12 69747292 + GP2 chr16 20322127 - Exonic hg19 STAD TCGA-VQ-A8PC-01A 3 25 Out-of-frame Inter-chr q15 p12.3 48302 ChimerSeq STARFusion TCGA_RNA-Seq WSB2-RFC5 WSB2 chr12 118490115 - RFC5 chr12 118456877 + Exonic hg19 STAD TCGA-D7-6525-01A 299 4 In-Frame Intra-chr q24.23 q24.23 Seq+ 48303 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57697534 + VMP1 chr17 57886157 + Exonic hg19 STAD TCGA-IN-A6RL-01A 40 15 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 48304 ChimerSeq STARFusion TCGA_RNA-Seq VCL-ADK VCL chr10 75758133 + ADK chr10 76429941 + Exonic hg19 STAD TCGA-IN-A6RL-01A 15 4 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 48305 ChimerSeq STARFusion TCGA_RNA-Seq CHUK-RHOQ CHUK chr10 101989185 - RHOQ chr2 46803226 + Exonic hg19 STAD TCGA-IN-A6RL-01A 11 2 In-Frame Inter-chr q24.31 Tumor suppressor gene p21 Seq+ 48306 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK6 PRSS1 chr7 142481912 + KLK6 chr19 51462572 - Exonic hg19 STAD TCGA-IN-A6RL-01A 10 0 3'UTR-CDS Inter-chr q13.41 Tumor suppressor gene 48307 ChimerSeq STARFusion TCGA_RNA-Seq WDR74-ACTN4 WDR74 chr11 62609175 - ACTN4 chr19 39220200 + Exonic hg19 STAD TCGA-IN-A6RL-01A 10 0 Out-of-frame Inter-chr q12.3 48308 ChimerSeq STARFusion TCGA_RNA-Seq STAU1-PABPC1L STAU1 chr20 47790732 - PABPC1L chr20 43545397 + Exonic hg19 STAD TCGA-IN-A6RL-01A 8 3 5'UTR-CDS Intra-chr q13.13 q13.12 Seq+ 48309 ChimerSeq STARFusion TCGA_RNA-Seq FGFR2-TACC2 FGFR2 chr10 123243212 - TACC2 chr10 123996910 + Exonic hg19 STAD TCGA-BR-8080-01A 54 27 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q26.13 Seq+ 48310 ChimerSeq STARFusion TCGA_RNA-Seq MMP15-CCDC135 MMP15 chr16 58060416 + CCDC135 chr16 57761211 + Exonic hg19 STAD TCGA-BR-8080-01A 34 17 In-Frame Intra-chr q21 Seq+ 48311 ChimerSeq STARFusion TCGA_RNA-Seq MSI2-RNF135 MSI2 chr17 55478832 + RNF135 chr17 29311635 + Exonic hg19 STAD TCGA-BR-8080-01A 10 5 In-Frame Intra-chr q22 q11.2 Seq+ 48312 ChimerSeq STARFusion TCGA_RNA-Seq EHMT1-CACNA1B EHMT1 chr9 140611634 + CACNA1B chr9 140846726 + Exonic hg19 STAD TCGA-BR-8080-01A 9 1 In-Frame Intra-chr q34.3 q34.3 48313 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R4-CRAT PPP2R4 chr9 131873910 + CRAT chr9 131866585 - Exonic hg19 STAD TCGA-BR-8080-01A 7 4 Out-of-frame Intra-chr Tumor suppressor gene q34.11 Seq+ 48314 ChimerSeq STARFusion TCGA_RNA-Seq ACACA-PPM1E ACACA chr17 35614625 - PPM1E chr17 57033010 + Exonic hg19 STAD TCGA-BR-8080-01A 7 2 In-Frame Intra-chr q22 48315 ChimerSeq STARFusion TCGA_RNA-Seq PDHX-C11orf49 PDHX chr11 34953031 + C11orf49 chr11 47159196 + Exonic hg19 STAD TCGA-BR-8080-01A 6 2 In-Frame Intra-chr p13 p11.2 48316 ChimerSeq STARFusion TCGA_RNA-Seq TCF3-C19orf25 TCF3 chr19 1619110 - C19orf25 chr19 1461823 - Exonic hg19 STAD TCGA-BR-8080-01A 4 8 CDS-3'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p13.3 Seq+ 48317 ChimerSeq STARFusion TCGA_RNA-Seq LMO2-CSTF3 LMO2 chr11 33886148 - CSTF3 chr11 33098996 - Exonic hg19 STAD TCGA-BR-8080-01A 3 1 CDS-3'UTR Intra-chr p13 p13 48318 ChimerSeq STARFusion TCGA_RNA-Seq NF1-TEX14 NF1 chr17 29486111 + TEX14 chr17 56661961 - Exonic hg19 STAD TCGA-BR-8080-01A 2 5 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q22 Seq+ 48319 ChimerSeq STARFusion TCGA_RNA-Seq C14orf79-ENO1 C14orf79 chr14 105452850 + ENO1 chr1 8921390 - Exonic hg19 STAD TCGA-BR-8080-01A 3 0 Out-of-frame Inter-chr q32.33 p36.23 48320 ChimerSeq STARFusion TCGA_RNA-Seq DYM-HNRNPUL1 DYM chr18 46986768 - HNRNPUL1 chr19 41798150 + Exonic hg19 STAD TCGA-BR-8080-01A 3 0 5'UTR-CDS Inter-chr q21.1 q13.2 Seq+ 48321 ChimerSeq STARFusion TCGA_RNA-Seq FKBP5-SATB1 FKBP5 chr6 35554824 - SATB1 chr3 18390250 - Exonic hg19 STAD TCGA-BR-8080-01A 3 0 Out-of-frame Inter-chr p21.31 p24.3 Transcription factor 48322 ChimerSeq STARFusion TCGA_RNA-Seq MDGA1-PTGDS MDGA1 chr6 37623476 - PTGDS chr9 139874697 + Exonic hg19 STAD TCGA-BR-8080-01A 3 0 Out-of-frame Inter-chr p21.2 q34.3 48323 ChimerSeq STARFusion TCGA_RNA-Seq PID1-GULP1 PID1 chr2 230135730 - GULP1 chr2 189248490 + Exonic hg19 STAD TCGA-BR-8080-01A 3 0 5'UTR-5'UTR Intra-chr q36.3 q32.1 48324 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R4-CRAT PPP2R4 chr9 131873910 + CRAT chr9 131865345 - Exonic hg19 STAD TCGA-BR-8080-01A 2 4 Out-of-frame Intra-chr Tumor suppressor gene q34.11 Seq+ 48325 ChimerSeq STARFusion TCGA_RNA-Seq TMX2-MS4A15 TMX2 chr11 57480279 + MS4A15 chr11 60538764 + Exonic hg19 STAD TCGA-BR-8080-01A 3 0 In-Frame Intra-chr q12.1 q12.2 Seq+ 48326 ChimerSeq STARFusion TCGA_RNA-Seq CTBP2-FAM175B CTBP2 chr10 126848888 - FAM175B chr10 126495400 + Exonic hg19 STAD TCGA-BR-8080-01A 2 3 5'UTR-CDS Intra-chr q26.13 q26.13 48327 ChimerSeq STARFusion TCGA_RNA-Seq CHD6-MYT1 CHD6 chr20 40122178 - MYT1 chr20 62830215 + Exonic hg19 STAD TCGA-BR-8080-01A 2 2 CDS-5'UTR Intra-chr q12 Other:WEE Transcription factor 48328 ChimerSeq STARFusion TCGA_RNA-Seq ACOT11-CSDE1 ACOT11 chr1 55065088 + CSDE1 chr1 115261366 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Intra-chr p32.3 p13.2 48329 ChimerSeq STARFusion TCGA_RNA-Seq ADD3-OBFC1 ADD3 chr10 111768057 + OBFC1 chr10 105677414 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 5'UTR-5'UTR Intra-chr q25.1 48330 ChimerSeq STARFusion TCGA_RNA-Seq ALG5-SUPT20H ALG5 chr13 37559764 - SUPT20H chr13 37586434 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 Out-of-frame Intra-chr q13.3 q13.3 48331 ChimerSeq STARFusion TCGA_RNA-Seq ARRDC2-SKI ARRDC2 chr19 18112382 + SKI chr1 2234417 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 Out-of-frame Inter-chr p13.11 p36.33 Transcription factor 48332 ChimerSeq STARFusion TCGA_RNA-Seq ATE1-FGFR2 ATE1 chr10 123549684 - FGFR2 chr10 123263455 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 Out-of-frame Intra-chr q26.13 q26.13 TK:FGFR Oncogene 48333 ChimerSeq STARFusion TCGA_RNA-Seq ATG3-CLTC ATG3 chr3 112262904 - CLTC chr17 57767997 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Inter-chr q13.2 q23.1 48334 ChimerSeq STARFusion TCGA_RNA-Seq BAZ1B-MET BAZ1B chr7 72912827 - MET chr7 116435709 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 Out-of-frame Intra-chr q11.23 q31.2 TK:Met Oncogene 48335 ChimerSeq STARFusion TCGA_RNA-Seq BAZ2B-MARCH7 BAZ2B chr2 160472753 - 2019_ 3_ 7_ chr2 160585520 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 Out-of-frame Intra-chr q24.2 Transcription factor q24.2 48336 ChimerSeq STARFusion TCGA_RNA-Seq BPHL-SHPK BPHL chr6 3119081 + SHPK chr17 3495677 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 CDS-3'UTR Inter-chr p25.2 p13.2 48337 ChimerSeq STARFusion TCGA_RNA-Seq BPHL-TRPV1 BPHL chr6 3119081 + TRPV1 chr17 3495677 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 5'UTR-5'UTR Inter-chr p25.2 p13.2 48338 ChimerSeq STARFusion TCGA_RNA-Seq CACNA1C-EP400 CACNA1C chr12 2717878 + EP400 chr12 132516498 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Intra-chr p13.33 q24.33 Oncogene 48339 ChimerSeq STARFusion TCGA_RNA-Seq CADPS2-CCDC14 CADPS2 chr7 121985628 - CCDC14 chr3 123634565 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 Out-of-frame Inter-chr q31.32 q21.1 48340 ChimerSeq STARFusion TCGA_RNA-Seq CCAR1-HNRNPH3 CCAR1 chr10 70532856 + HNRNPH3 chr10 70101342 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Intra-chr q21.3 Tumor suppressor gene q21.3 Seq+ 48341 ChimerSeq STARFusion TCGA_RNA-Seq CD44-FAM120A CD44 chr11 35227790 + FAM120A chr9 96305504 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Inter-chr p13 Oncogene Tumor suppressor gene q22.31 48342 ChimerSeq STARFusion TCGA_RNA-Seq CD44-PDHX CD44 chr11 35160917 + PDHX chr11 34952951 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Intra-chr p13 Oncogene Tumor suppressor gene p13 Seq+ 48343 ChimerSeq STARFusion TCGA_RNA-Seq CGGBP1-MLLT4 CGGBP1 chr3 88107169 - MLLT4 chr6 168348973 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 5'UTR-CDS Inter-chr p11.1 Transcription factor 48344 ChimerSeq STARFusion TCGA_RNA-Seq CHIC2-DANCR CHIC2 chr4 54915122 - DANCR chr4 53586035 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 CDS-3'UTR Intra-chr q12 q12 48345 ChimerSeq STARFusion TCGA_RNA-Seq CRNDE-LGALS4 CRNDE chr16 54957497 - LGALS4 chr19 39294535 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 3'UTR-CDS Inter-chr q12.2 48346 ChimerSeq STARFusion TCGA_RNA-Seq CSRNP1-NFIL3 CSRNP1 chr3 39194929 - NFIL3 chr9 94173188 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 5'UTR-5'UTR Inter-chr p22.2 Tumor suppressor gene Transcription factor q22.31 Transcription factor 48347 ChimerSeq STARFusion TCGA_RNA-Seq CTBP2-FAM53B CTBP2 chr10 126727566 - FAM53B chr10 126395456 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 CDS-5'UTR Intra-chr q26.13 q26.13 48348 ChimerSeq STARFusion TCGA_RNA-Seq CTNNBIP1-LZIC CTNNBIP1 chr1 9970153 - LZIC chr1 9992956 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 5'UTR-CDS Intra-chr p36.22 Tumor suppressor gene p36.22 48349 ChimerSeq STARFusion TCGA_RNA-Seq DAB2IP-MPDZ DAB2IP chr9 124329507 + MPDZ chr9 13206098 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 Out-of-frame Intra-chr q33.2 Tumor suppressor gene p23 48350 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC1-GNG5 DNAJC1 chr10 22292142 - GNG5 chr1 84967653 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Inter-chr p12.31 p22.3 48351 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK3-MBD2 EIF2AK3 chr2 88913242 - MBD2 chr18 51715381 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Inter-chr p11.2 q21.2 Transcription factor Seq+ 48352 ChimerSeq STARFusion TCGA_RNA-Seq ELF1-CLASP1 ELF1 chr13 41556119 - CLASP1 chr2 122165291 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Inter-chr q14.11 Transcription factor q14.3 48353 ChimerSeq STARFusion TCGA_RNA-Seq EPC1-ARHGAP12 EPC1 chr10 32667419 - ARHGAP12 chr10 32199491 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 5'UTR-5'UTR Intra-chr p11.22 p11.22 Seq+ 48354 ChimerSeq STARFusion TCGA_RNA-Seq EXTL2-VGLL4 EXTL2 chr1 101360189 - VGLL4 chr3 11606493 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 5'UTR-CDS Inter-chr p21.2 Tumor suppressor gene p25.2 48355 ChimerSeq STARFusion TCGA_RNA-Seq FAR1-TTC17 FAR1 chr11 13690353 + TTC17 chr11 43400783 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 5'UTR-CDS Intra-chr p15.3 p12 48356 ChimerSeq STARFusion TCGA_RNA-Seq GGACT-ZC3H13 GGACT chr13 101236079 - ZC3H13 chr13 46619651 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 Out-of-frame Intra-chr q32.3 q14.13 48357 ChimerSeq STARFusion TCGA_RNA-Seq GP2-ARHGAP32 GP2 chr16 20329507 - ARHGAP32 chr11 128841054 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 Out-of-frame Inter-chr p12.3 q24.3 48358 ChimerSeq STARFusion TCGA_RNA-Seq HABP2-UQCRC2 HABP2 chr10 115312949 + UQCRC2 chr16 21969856 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Inter-chr q25.3 48359 ChimerSeq STARFusion TCGA_RNA-Seq HMG20A-BTBD1 HMG20A chr15 77713346 + BTBD1 chr15 83710677 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 5'UTR-CDS Intra-chr q24.3 Transcription factor q25.2 48360 ChimerSeq STARFusion TCGA_RNA-Seq ITGB1BP1-MBOAT2 ITGB1BP1 chr2 9563502 - MBOAT2 chr2 9048846 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 5'UTR-CDS Intra-chr p25.1 p25.1 48361 ChimerSeq STARFusion TCGA_RNA-Seq LYN-CKS1B LYN chr8 56792662 + CKS1B chr1 154950463 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 5'UTR-5'UTR Inter-chr q12.1 TK:Src q21.3 Oncogene 48362 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K7-SMAP1 MAP3K7 chr6 91296483 - SMAP1 chr6 71546644 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Intra-chr q15 STE:STE11 Oncogene q13 48363 ChimerSeq STARFusion TCGA_RNA-Seq MARCH8-ABCD3 2019_ 3_ 8_ chr10 46089683 - ABCD3 chr1 94953098 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 Out-of-frame Inter-chr p21.3 48364 ChimerSeq STARFusion TCGA_RNA-Seq MCF2L-PLAC8 MCF2L chr13 113679072 + PLAC8 chr4 84015944 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 Out-of-frame Inter-chr q34 q21.22 48365 ChimerSeq STARFusion TCGA_RNA-Seq MECP2-OSBPL5 MECP2 chrX 153357642 - OSBPL5 chr11 3150399 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 CDS-5'UTR Inter-chr q28 Transcription factor p15.4 48366 ChimerSeq STARFusion TCGA_RNA-Seq MGMT-EBF3 MGMT chr10 131265560 + EBF3 chr10 131676113 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 Out-of-frame Intra-chr q26.3 q26.3 Tumor suppressor gene Transcription factor 48367 ChimerSeq STARFusion TCGA_RNA-Seq MICALL2-PPP1R1B MICALL2 chr7 1489876 - PPP1R1B chr17 37785423 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Inter-chr p22.3 q12 Tumor suppressor gene 48368 ChimerSeq STARFusion TCGA_RNA-Seq MIR4454-MXI1 MIR4454 chr5 170194312 - MXI1 chr10 111987947 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 5'UTR-5'UTR Inter-chr q32.2 q25.2 Tumor suppressor gene Transcription factor 48369 ChimerSeq STARFusion TCGA_RNA-Seq MRGPRF-CCND1 MRGPRF chr11 68780551 - CCND1 chr11 69462762 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 5'UTR-CDS Intra-chr q13.3 q13.3 Oncogene 48370 ChimerSeq STARFusion TCGA_RNA-Seq MTPAP-FOXJ3 MTPAP chr10 30638048 - FOXJ3 chr1 42664901 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 Out-of-frame Inter-chr p11.23 p34.2 Transcription factor 48371 ChimerSeq STARFusion TCGA_RNA-Seq MYSM1-TM2D1 MYSM1 chr1 59158533 - TM2D1 chr1 62189456 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 Out-of-frame Intra-chr p32.1 Transcription factor p31.3 48372 ChimerSeq STARFusion TCGA_RNA-Seq NAPG-EXOC4 NAPG chr18 10526155 + EXOC4 chr7 133002038 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Inter-chr p11.22 q33 48373 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-CDH11 NCOR2 chr12 125051854 - CDH11 chr16 65038944 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 5'UTR-5'UTR Inter-chr q24.31 q21 Oncogene Tumor suppressor gene 48374 ChimerSeq STARFusion TCGA_RNA-Seq NEK2-CBLL1 NEK2 chr1 211844544 - CBLL1 chr7 107395863 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 Out-of-frame Inter-chr q32.3 Other:NEK q22.3 48375 ChimerSeq STARFusion TCGA_RNA-Seq NRG1-PSAP NRG1 chr8 31498245 + PSAP chr10 73594262 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Inter-chr p12 q22.1 48376 ChimerSeq STARFusion TCGA_RNA-Seq PDE4A-NPAS2 PDE4A chr19 10543247 + NPAS2 chr2 101564697 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 Out-of-frame Inter-chr p13.2 q11.2 Tumor suppressor gene Transcription factor 48377 ChimerSeq STARFusion TCGA_RNA-Seq PDPK1-HNRNPUL1 PDPK1 chr16 2611523 + HNRNPUL1 chr19 41774128 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Inter-chr p13.3 q13.2 48378 ChimerSeq STARFusion TCGA_RNA-Seq PELI1-BANP PELI1 chr2 64335374 - BANP chr16 88039696 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Inter-chr p14 q24.2 Tumor suppressor gene 48379 ChimerSeq STARFusion TCGA_RNA-Seq PGPEP1L-ZNF775 PGPEP1L chr15 99548658 - ZNF775 chr7 150104672 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 5'UTR-3'UTR Inter-chr q26.3 q36.1 Transcription factor 48380 ChimerSeq STARFusion TCGA_RNA-Seq PLXDC2-MICU1 PLXDC2 chr10 20106120 + MICU1 chr10 74326552 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 CDS-5'UTR Intra-chr p12.31 q22.1 48381 ChimerSeq STARFusion TCGA_RNA-Seq PRPF6-PTPRT PRPF6 chr20 62616378 + PTPRT chr20 41306799 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 Out-of-frame Intra-chr q13.33 q13.11 Oncogene Tumor suppressor gene 48382 ChimerSeq STARFusion TCGA_RNA-Seq PTBP3-ARID5A PTBP3 chr9 115060121 - ARID5A chr2 97213139 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Inter-chr q32 q11.2 Transcription factor 48383 ChimerSeq STARFusion TCGA_RNA-Seq PVRL2-NFATC3 PVRL2 chr19 45368917 + NFATC3 chr16 68215378 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Inter-chr q22.1 Transcription factor 48384 ChimerSeq STARFusion TCGA_RNA-Seq RASSF8-SSPN RASSF8 chr12 26208379 + SSPN chr12 26377226 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 Out-of-frame Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 48385 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-NADK2 RCC1 chr1 28832596 + NADK2 chr5 36217986 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 Out-of-frame Inter-chr p35.3 p13.2 48386 ChimerSeq STARFusion TCGA_RNA-Seq RNF121-RIT1 RNF121 chr11 71693961 + RIT1 chr1 155874293 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 Out-of-frame Inter-chr q13.4 q22 48387 ChimerSeq STARFusion TCGA_RNA-Seq RRP15-EPRS RRP15 chr1 218475901 + EPRS chr1 220162165 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Intra-chr q41 q41 48388 ChimerSeq STARFusion TCGA_RNA-Seq SARNP-STAT6 SARNP chr12 56211450 - STAT6 chr12 57502082 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 CDS-5'UTR Intra-chr q13.2 q13.3 Transcription factor 48389 ChimerSeq STARFusion TCGA_RNA-Seq SBF2-KNTC1 SBF2 chr11 10215449 - KNTC1 chr12 123060090 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Inter-chr p15.4 q24.31 Seq+ 48390 ChimerSeq STARFusion TCGA_RNA-Seq SCAF4-APP SCAF4 chr21 33103976 - APP chr21 27425664 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 Out-of-frame Intra-chr q22.11 q21.3 48391 ChimerSeq STARFusion TCGA_RNA-Seq SCAF4-TIAM1 SCAF4 chr21 33103976 - TIAM1 chr21 32711737 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 CDS-5'UTR Intra-chr q22.11 q22.11 48392 ChimerSeq STARFusion TCGA_RNA-Seq SCD5-SEPT2 SCD5 chr4 83601860 - SEPT2 chr2 242287549 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Inter-chr q21.22 q37.3 48393 ChimerSeq STARFusion TCGA_RNA-Seq SERF2-FAM171A1 SERF2 chr15 44091305 + FAM171A1 chr10 15256600 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 3'UTR-CDS Inter-chr q15.3 p13 48394 ChimerSeq STARFusion TCGA_RNA-Seq SLCO6A1-PAM SLCO6A1 chr5 101811401 - PAM chr5 102338737 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Intra-chr q21.1 q21.1 48395 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-NADK2 SNHG3 chr1 28832596 + NADK2 chr5 36217986 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 Out-of-frame Inter-chr p35.3 p13.2 48396 ChimerSeq STARFusion TCGA_RNA-Seq SOCS4-CCSER1 SOCS4 chr14 55494189 + CCSER1 chr4 91234014 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 Out-of-frame Inter-chr q22.3 q22.1 48397 ChimerSeq STARFusion TCGA_RNA-Seq SPG11-TPCN1 SPG11 chr15 44925703 - TPCN1 chr12 113723694 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Inter-chr q21.1 q24.13 48398 ChimerSeq STARFusion TCGA_RNA-Seq SPOCK1-WDR19 SPOCK1 chr5 136834062 - WDR19 chr4 39229830 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Inter-chr q31.2 p14 48399 ChimerSeq STARFusion TCGA_RNA-Seq SPPL2A-SHB SPPL2A chr15 51057665 - SHB chr9 38016128 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Inter-chr q21.2 p13.1 48400 ChimerSeq STARFusion TCGA_RNA-Seq STAU2-PDHA1 STAU2 chr8 74439926 - PDHA1 chrX 19372609 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Inter-chr q21.11 p22.12 48401 ChimerSeq STARFusion TCGA_RNA-Seq SUCO-RYK SUCO chr1 172526934 + RYK chr3 133914026 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 Out-of-frame Inter-chr q24.3 q22.2 TK:Ryk 48402 ChimerSeq STARFusion TCGA_RNA-Seq TM4SF19-RHOA TM4SF19 chr3 196065135 - RHOA chr3 49413024 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 5'UTR-5'UTR Intra-chr q29 p21.31 Oncogene Tumor suppressor gene 48403 ChimerSeq STARFusion TCGA_RNA-Seq TM4SF19-RHOA TM4SF19 chr3 196065135 - RHOA chr3 49413024 - Exonic hg19 STAD TCGA-BR-8080-01A 2 0 5'UTR-5'UTR Intra-chr q29 p21.31 Oncogene Tumor suppressor gene 48404 ChimerSeq STARFusion TCGA_RNA-Seq TNS1-CD46 TNS1 chr2 218745621 - CD46 chr1 207930359 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 In-Frame Inter-chr q35 q32.2 48405 ChimerSeq STARFusion TCGA_RNA-Seq TYMS-PABPC1L TYMS chr18 662320 + PABPC1L chr20 43561698 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 3'UTR-CDS Inter-chr p11.32 q13.12 48406 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB40-PPP1R12B ZBTB40 chr1 22778497 + PPP1R12B chr1 202418117 + Exonic hg19 STAD TCGA-BR-8080-01A 2 0 5'UTR-CDS Intra-chr p36.12 Transcription factor q32.1 48407 ChimerSeq STARFusion TCGA_RNA-Seq TGOLN2-ESCO1 TGOLN2 chr2 85552038 - ESCO1 chr18 19173449 - Exonic hg19 STAD TCGA-BR-8682-01A 61 0 CDS-5'UTR Inter-chr p11.2 q11.2 48408 ChimerSeq STARFusion TCGA_RNA-Seq RPL13A-MALAT1 RPL13A chr19 49995049 + MALAT1 chr11 65271238 + Exonic hg19 STAD TCGA-BR-8682-01A 3 5 Out-of-frame Inter-chr q13.33 q13.1 48409 ChimerSeq STARFusion TCGA_RNA-Seq FMNL2-KRT32 FMNL2 chr2 153378540 + KRT32 chr17 39616491 - Exonic hg19 STAD TCGA-R5-A7ZE-01B 104 35 Out-of-frame Inter-chr q23.3 q21.2 Seq+ 48410 ChimerSeq STARFusion TCGA_RNA-Seq AP3D1-PLEKHF1 AP3D1 chr19 2151238 - PLEKHF1 chr19 30164731 + Exonic hg19 STAD TCGA-R5-A7ZE-01B 73 26 CDS-5'UTR Intra-chr p13.3 q12 Seq+ 48411 ChimerSeq STARFusion TCGA_RNA-Seq DOT1L-PLEKHF1 DOT1L chr19 2164264 + PLEKHF1 chr19 30164731 + Exonic hg19 STAD TCGA-R5-A7ZE-01B 60 44 CDS-5'UTR Intra-chr p13.3 Oncogene Transcription factor q12 Seq+ 48412 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0232-LRCH3 KIAA0232 chr4 6826411 + LRCH3 chr3 197541779 + Exonic hg19 STAD TCGA-R5-A7ZE-01B 48 22 Out-of-frame Inter-chr p16.1 q29 Seq+ 48413 ChimerSeq STARFusion TCGA_RNA-Seq LCLAT1-FMNL2 LCLAT1 chr2 30670249 + FMNL2 chr2 153378457 + Exonic hg19 STAD TCGA-R5-A7ZE-01B 29 49 5'UTR-CDS Intra-chr p23.1 q23.3 Seq+ 48414 ChimerSeq STARFusion TCGA_RNA-Seq CASC3-ACLY CASC3 chr17 38324670 + ACLY chr17 40024157 - Exonic hg19 STAD TCGA-R5-A7ZE-01B 24 19 Out-of-frame Intra-chr q21.1 q21.2 Seq+ 48415 ChimerSeq STARFusion TCGA_RNA-Seq SFMBT1-TKT SFMBT1 chr3 53079832 - TKT chr3 53276258 - Exonic hg19 STAD TCGA-R5-A7ZE-01B 22 14 5'UTR-CDS Intra-chr p21.1 p21.1 Tumor suppressor gene Seq+ 48416 ChimerSeq STARFusion TCGA_RNA-Seq LCLAT1-FMNL2 LCLAT1 chr2 30682588 + FMNL2 chr2 153378457 + Exonic hg19 STAD TCGA-R5-A7ZE-01B 11 49 Out-of-frame Intra-chr p23.1 q23.3 Seq+ 48417 ChimerSeq STARFusion TCGA_RNA-Seq DDX46-CAMLG DDX46 chr5 134094645 + CAMLG chr5 134086449 + Exonic hg19 STAD TCGA-R5-A7ZE-01B 21 7 Out-of-frame Intra-chr q31.1 q31.1 48418 ChimerSeq STARFusion TCGA_RNA-Seq AMBRA1-CAT AMBRA1 chr11 46615378 - CAT chr11 34470739 + Exonic hg19 STAD TCGA-R5-A7ZE-01B 20 4 5'UTR-CDS Intra-chr p11.2 p13 Tumor suppressor gene Seq+ 48419 ChimerSeq STARFusion TCGA_RNA-Seq CMIP-BCMO1 CMIP chr16 81479146 + BCMO1 chr16 81314462 + Exonic hg19 STAD TCGA-R5-A7ZE-01B 16 5 In-Frame Intra-chr q23.2 Seq+ 48420 ChimerSeq STARFusion TCGA_RNA-Seq GON4L-SSR2 GON4L chr1 155826938 - SSR2 chr1 155988159 - Exonic hg19 STAD TCGA-R5-A7ZE-01B 17 0 5'UTR-CDS Intra-chr q22 q22 Seq+ 48421 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-ERBB2 WIPF2 chr17 38421398 + ERBB2 chr17 37872554 + Exonic hg19 STAD TCGA-R5-A7ZE-01B 14 7 In-Frame Intra-chr q21.2 q12 Oncogene Seq+ 48422 ChimerSeq STARFusion TCGA_RNA-Seq LCLAT1-FMNL2 LCLAT1 chr2 30670270 + FMNL2 chr2 153378457 + Exonic hg19 STAD TCGA-R5-A7ZE-01B 3 49 5'UTR-CDS Intra-chr p23.1 q23.3 Seq+ 48423 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF2-CCT3 ARHGEF2 chr1 155924693 - CCT3 chr1 156305679 - Exonic hg19 STAD TCGA-R5-A7ZE-01B 13 8 In-Frame Intra-chr q22 q22 Seq+ 48424 ChimerSeq STARFusion TCGA_RNA-Seq SFMBT1-TKT SFMBT1 chr3 53080476 - TKT chr3 53276258 - Exonic hg19 STAD TCGA-R5-A7ZE-01B 7 14 5'UTR-CDS Intra-chr p21.1 p21.1 Tumor suppressor gene Seq+ 48425 ChimerSeq STARFusion TCGA_RNA-Seq SNX32-PI3 SNX32 chr11 65623677 + PI3 chr20 43803552 + Exonic hg19 STAD TCGA-R5-A7ZE-01B 8 10 Out-of-frame Inter-chr q13.1 q13.12 48426 ChimerSeq STARFusion TCGA_RNA-Seq NUMA1-CLPB NUMA1 chr11 71746948 - CLPB chr11 72119248 - Exonic hg19 STAD TCGA-R5-A7ZE-01B 9 4 In-Frame Intra-chr q13.4 Oncogene q13.4 Seq+ 48427 ChimerSeq STARFusion TCGA_RNA-Seq RHPN2-TSHZ3 RHPN2 chr19 33481420 - TSHZ3 chr19 31766039 - Exonic hg19 STAD TCGA-R5-A7ZE-01B 9 4 CDS-3'UTR Intra-chr q13.11 q12 Transcription factor Seq+ 48428 ChimerSeq STARFusion TCGA_RNA-Seq S100A9-KRT17 S100A9 chr1 153333413 + KRT17 chr17 39780390 - Exonic hg19 STAD TCGA-R5-A7ZE-01B 7 7 Out-of-frame Inter-chr q21.3 q21.2 48429 ChimerSeq STARFusion TCGA_RNA-Seq FA2H-GLG1 FA2H chr16 74773921 - GLG1 chr16 74506309 - Exonic hg19 STAD TCGA-R5-A7ZE-01B 7 6 In-Frame Intra-chr q23.1 q23.1 Seq+ 48430 ChimerSeq STARFusion TCGA_RNA-Seq ARMC7-CDR2L ARMC7 chr17 73106701 + CDR2L chr17 72995599 + Exonic hg19 STAD TCGA-R5-A7ZE-01B 7 4 In-Frame Intra-chr q25.1 q25.1 Seq+ 48431 ChimerSeq STARFusion TCGA_RNA-Seq SNX32-PI3 SNX32 chr11 65623697 + PI3 chr20 43803572 + Exonic hg19 STAD TCGA-R5-A7ZE-01B 3 10 Out-of-frame Inter-chr q13.1 q13.12 48432 ChimerSeq STARFusion TCGA_RNA-Seq ORMDL3-SPRR3 ORMDL3 chr17 38078898 - SPRR3 chr1 152974234 + Exonic hg19 STAD TCGA-R5-A7ZE-01B 3 9 Out-of-frame Inter-chr q21.1 q21.3 48433 ChimerSeq STARFusion TCGA_RNA-Seq RPS20-SPRR1B RPS20 chr8 56985618 - SPRR1B chr1 153003686 + Exonic hg19 STAD TCGA-R5-A7ZE-01B 3 8 Out-of-frame Inter-chr q12.1 q21.3 48434 ChimerSeq STARFusion TCGA_RNA-Seq NKD1-ADCY7 NKD1 chr16 50583466 + ADCY7 chr16 50321823 + Exonic hg19 STAD TCGA-BR-8678-01A 92 87 CDS-3'UTR Intra-chr q12.1 q12.1 Seq+ 48435 ChimerSeq STARFusion TCGA_RNA-Seq FAM20B-RALGPS2 FAM20B chr1 179023773 + RALGPS2 chr1 178846633 + Exonic hg19 STAD TCGA-BR-8678-01A 91 76 In-Frame Intra-chr q25.2 q25.2 Seq+ 48436 ChimerSeq STARFusion TCGA_RNA-Seq URI1-PLEKHF1 URI1 chr19 30477324 + PLEKHF1 chr19 30164731 + Exonic hg19 STAD TCGA-BR-8678-01A 67 38 5'UTR-5'UTR Intra-chr q12 q12 Seq+ 48437 ChimerSeq STARFusion TCGA_RNA-Seq WHSC1-NAT8L WHSC1 chr4 1932497 + NAT8L chr4 2062725 + Exonic hg19 STAD TCGA-BR-8678-01A 67 35 In-Frame Intra-chr Oncogene p16.3 Seq+ 48438 ChimerSeq STARFusion TCGA_RNA-Seq CPSF1-ARHGAP39 CPSF1 chr8 145634399 - ARHGAP39 chr8 145806661 - Exonic hg19 STAD TCGA-BR-8678-01A 37 17 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 48439 ChimerSeq STARFusion TCGA_RNA-Seq NKD1-ADCY7 NKD1 chr16 50583466 + ADCY7 chr16 50326587 + Exonic hg19 STAD TCGA-BR-8678-01A 14 87 CDS-3'UTR Intra-chr q12.1 q12.1 Seq+ 48440 ChimerSeq STARFusion TCGA_RNA-Seq IP6K1-TRAIP IP6K1 chr3 49823787 - TRAIP chr3 49885633 - Exonic hg19 STAD TCGA-BR-8678-01A 29 10 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 48441 ChimerSeq STARFusion TCGA_RNA-Seq FAM20B-RALGPS2 FAM20B chr1 179035994 + RALGPS2 chr1 178846633 + Exonic hg19 STAD TCGA-BR-8678-01A 12 76 Out-of-frame Intra-chr q25.2 q25.2 Seq+ 48442 ChimerSeq STARFusion TCGA_RNA-Seq SPECC1L-SMARCB1 SPECC1L chr22 24666951 + SMARCB1 chr22 24133943 + Exonic hg19 STAD TCGA-BR-8678-01A 19 21 5'UTR-CDS Intra-chr q11.23 q11.23 Oncogene Tumor suppressor gene Seq+ 48443 ChimerSeq STARFusion TCGA_RNA-Seq VPS54-PELI1 VPS54 chr2 64210998 - PELI1 chr2 64335513 - Exonic hg19 STAD TCGA-BR-8678-01A 17 16 CDS-5'UTR Intra-chr p14 p14 Seq+ 48444 ChimerSeq STARFusion TCGA_RNA-Seq TAP2-DAXX TAP2 chr6 32800110 - DAXX chr6 33291807 - Exonic hg19 STAD TCGA-BR-8678-01A 16 11 CDS-5'UTR Intra-chr Oncogene Seq+ 48445 ChimerSeq STARFusion TCGA_RNA-Seq TAP2-DAXX TAP2 chr6 32800110 - DAXX chr6 33291807 - Exonic hg19 STAD TCGA-BR-8678-01A 16 11 CDS-5'UTR Intra-chr Oncogene Seq+ 48446 ChimerSeq STARFusion TCGA_RNA-Seq WDFY2-FOXO1 WDFY2 chr13 52158960 + FOXO1 chr13 41134997 - Exonic hg19 STAD TCGA-BR-8678-01A 15 14 Out-of-frame Intra-chr q14.3 q14.11 Oncogene Tumor suppressor gene Transcription factor Seq+ 48447 ChimerSeq STARFusion TCGA_RNA-Seq VPS54-PELI1 VPS54 chr2 64246072 - PELI1 chr2 64335513 - Exonic hg19 STAD TCGA-BR-8678-01A 7 16 5'UTR-5'UTR Intra-chr p14 p14 Seq+ 48448 ChimerSeq STARFusion TCGA_RNA-Seq DPP7-EXD3 DPP7 chr9 140008317 - EXD3 chr9 140218595 - Exonic hg19 STAD TCGA-BR-8678-01A 8 6 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 48449 ChimerSeq STARFusion TCGA_RNA-Seq RECQL5-UNC13D RECQL5 chr17 73654378 - UNC13D chr17 73839347 - Exonic hg19 STAD TCGA-BR-8678-01A 6 11 In-Frame Intra-chr q25.1 q25.1 Seq+ 48450 ChimerSeq STARFusion TCGA_RNA-Seq ITPR2-RAD17 ITPR2 chr12 26553061 - RAD17 chr5 68706320 + Exonic hg19 STAD TCGA-BR-8678-01A 7 5 Out-of-frame Inter-chr p11.23 Seq+ 48451 ChimerSeq STARFusion TCGA_RNA-Seq CFL1-CXCL14 CFL1 chr11 65622296 - CXCL14 chr5 134907463 - Exonic hg19 STAD TCGA-BR-8678-01A 6 0 Out-of-frame Inter-chr q13.1 q31.1 Tumor suppressor gene 48452 ChimerSeq STARFusion TCGA_RNA-Seq FOXO1-WDFY2 FOXO1 chr13 41239720 - WDFY2 chr13 52234732 + Exonic hg19 STAD TCGA-BR-8678-01A 4 5 Out-of-frame Intra-chr q14.11 Oncogene Tumor suppressor gene Transcription factor q14.3 Seq+ 48453 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH1-AGPAT2 NOTCH1 chr9 139417302 - AGPAT2 chr9 139569259 - Exonic hg19 STAD TCGA-BR-8678-01A 4 4 Out-of-frame Intra-chr q34.3 Oncogene Tumor suppressor gene q34.3 48454 ChimerSeq STARFusion TCGA_RNA-Seq PTENP1-ZNF212 PTENP1 chr9 33677008 - ZNF212 chr7 148936782 + Exonic hg19 STAD TCGA-BR-8678-01A 4 0 Out-of-frame Inter-chr p13.3 Tumor suppressor gene q36.1 Transcription factor 48455 ChimerSeq STARFusion TCGA_RNA-Seq H19-CTIF H19 chr11 2017102 - CTIF chr18 46146087 + Exonic hg19 STAD TCGA-BR-8678-01A 3 2 Out-of-frame Inter-chr p15.5 Tumor suppressor gene 48456 ChimerSeq STARFusion TCGA_RNA-Seq CYLD-ADCY7 CYLD chr16 50776752 + ADCY7 chr16 50321823 + Exonic hg19 STAD TCGA-BR-8678-01A 3 0 5'UTR-3'UTR Intra-chr q12.1 Oncogene Tumor suppressor gene q12.1 48457 ChimerSeq STARFusion TCGA_RNA-Seq GLYR1-GDI2 GLYR1 chr16 4853892 - GDI2 chr10 5815913 - Exonic hg19 STAD TCGA-BR-8678-01A 3 0 Out-of-frame Inter-chr p13.3 Transcription factor p15.1 48458 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-AVIL TBL1XR1 chr3 176738552 - AVIL chr12 58199948 - Exonic hg19 STAD TCGA-BR-8678-01A 3 0 Out-of-frame Inter-chr q26.32 q14.1 48459 ChimerSeq STARFusion TCGA_RNA-Seq MFSD11-SNHG16 MFSD11 chr17 74750286 + SNHG16 chr17 74559201 + Exonic hg19 STAD TCGA-BR-8678-01A 2 2 Out-of-frame Intra-chr q25.1 q25.1 48460 ChimerSeq STARFusion TCGA_RNA-Seq CHD5-NPHP4 CHD5 chr1 6208914 - NPHP4 chr1 5993389 - Exonic hg19 STAD TCGA-BR-8678-01A 2 1 In-Frame Intra-chr p36.31 Tumor suppressor gene p36.31 48461 ChimerSeq STARFusion TCGA_RNA-Seq MTMR2-MAML2 MTMR2 chr11 95578117 - MAML2 chr11 95724887 - Exonic hg19 STAD TCGA-BR-8678-01A 2 1 In-Frame Intra-chr q21 q21 Oncogene Seq+ 48462 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN5-METAP1 TSPAN5 chr4 99579297 - METAP1 chr4 99950018 + Exonic hg19 STAD TCGA-BR-8678-01A 2 1 In-Frame Intra-chr q23 q23 48463 ChimerSeq STARFusion TCGA_RNA-Seq UBAC1-NPLOC4 UBAC1 chr9 138839644 - NPLOC4 chr17 79526442 - Exonic hg19 STAD TCGA-BR-8678-01A 2 1 Out-of-frame Inter-chr q34.3 q25.3 48464 ChimerSeq STARFusion TCGA_RNA-Seq ABLIM1-C11orf57 ABLIM1 chr10 116247717 - C11orf57 chr11 111951133 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Inter-chr q25.3 q23.1 48465 ChimerSeq STARFusion TCGA_RNA-Seq AKAP10-KLHL7 AKAP10 chr17 19843026 - KLHL7 chr7 23191686 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Inter-chr p11.2 p15.3 48466 ChimerSeq STARFusion TCGA_RNA-Seq ALG12-TTC3 ALG12 chr22 50311911 - TTC3 chr21 38480692 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 5'UTR-CDS Inter-chr q13.33 q22.13 48467 ChimerSeq STARFusion TCGA_RNA-Seq APH1B-DHX29 APH1B chr15 63571530 + DHX29 chr5 54573110 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Inter-chr q22.2 q11.2 48468 ChimerSeq STARFusion TCGA_RNA-Seq ARID4B-CD46 ARID4B chr1 235490229 - CD46 chr1 207930359 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Intra-chr q42.3 q32.2 48469 ChimerSeq STARFusion TCGA_RNA-Seq ATF7IP2-GNAS ATF7IP2 chr16 10479979 + GNAS chr20 57470667 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 5'UTR-5'UTR Inter-chr p13.2 q13.32 Oncogene 48470 ChimerSeq STARFusion TCGA_RNA-Seq ATG5-NAB1 ATG5 chr6 106740903 - NAB1 chr2 191520703 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 CDS-5'UTR Inter-chr q21 q32.2 48471 ChimerSeq STARFusion TCGA_RNA-Seq ATL2-ZNF638 ATL2 chr2 38570410 - ZNF638 chr2 71645732 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 In-Frame Intra-chr p22.1 p13.3 48472 ChimerSeq STARFusion TCGA_RNA-Seq B3GNT5-KLHL24 B3GNT5 chr3 182971260 + KLHL24 chr3 183361268 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 5'UTR-5'UTR Intra-chr q27.1 q27.1 48473 ChimerSeq STARFusion TCGA_RNA-Seq C1GALT1-MIOS C1GALT1 chr7 7222451 + MIOS chr7 7612067 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 5'UTR-5'UTR Intra-chr p22.1 p21.3 48474 ChimerSeq STARFusion TCGA_RNA-Seq CBFA2T2-PSMB1 CBFA2T2 chr20 32078107 + PSMB1 chr6 170858201 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Inter-chr q11.21 48475 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L-TUBE1 DIS3L chr15 66587479 + TUBE1 chr6 112402410 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Inter-chr q22.31 q21 48476 ChimerSeq STARFusion TCGA_RNA-Seq DOC2B-PPP1R12C DOC2B chr17 30898 - PPP1R12C chr19 55607703 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Inter-chr q13.42 48477 ChimerSeq STARFusion TCGA_RNA-Seq DPM1-ZFAS1 DPM1 chr20 49574900 - ZFAS1 chr20 47905582 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Intra-chr q13.13 q13.13 Tumor suppressor gene 48478 ChimerSeq STARFusion TCGA_RNA-Seq EVI5-CEPT1 EVI5 chr1 93250393 - CEPT1 chr1 111690264 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 CDS-5'UTR Intra-chr p22.1 p13.3 48479 ChimerSeq STARFusion TCGA_RNA-Seq GART-FOXK1 GART chr21 34897076 - FOXK1 chr7 4796625 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Inter-chr p22.1 Transcription factor Seq+ 48480 ChimerSeq STARFusion TCGA_RNA-Seq GUSBP1-PPP3R1 GUSBP1 chr5 21501935 + PPP3R1 chr2 68444263 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 5'UTR-CDS Inter-chr p14.3 p14 48481 ChimerSeq STARFusion TCGA_RNA-Seq HSPE1-STAG1 HSPE1 chr2 198365962 + STAG1 chr3 136196254 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Inter-chr q33.1 q22.3 48482 ChimerSeq STARFusion TCGA_RNA-Seq IFIT3-MORF4L1 IFIT3 chr10 91092384 + MORF4L1 chr15 79170555 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Inter-chr q23.31 q25.1 48483 ChimerSeq STARFusion TCGA_RNA-Seq IRF2-LSM6 IRF2 chr4 185395533 - LSM6 chr4 147104064 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 5'UTR-5'UTR Intra-chr q35.1 Transcription factor q31.22 48484 ChimerSeq STARFusion TCGA_RNA-Seq MACC1-LMO7 MACC1 chr7 20256922 - LMO7 chr13 76414221 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 5'UTR-CDS Inter-chr p21.1 q22.2 48485 ChimerSeq STARFusion TCGA_RNA-Seq MAPKBP1-CDKAL1 MAPKBP1 chr15 42067587 + CDKAL1 chr6 21000458 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 In-Frame Inter-chr q15.1 p22.3 48486 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-CDC42 MATR3 chr5 138629494 + CDC42 chr1 22404922 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 5'UTR-5'UTR Inter-chr q31.2 p36.12 48487 ChimerSeq STARFusion TCGA_RNA-Seq MTX2-SNX25 MTX2 chr2 177134397 + SNX25 chr4 186260533 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Inter-chr q31.1 q35.1 48488 ChimerSeq STARFusion TCGA_RNA-Seq MYO10-CD2AP MYO10 chr5 16935897 - CD2AP chr6 47563597 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Inter-chr p15.1 p12.3 48489 ChimerSeq STARFusion TCGA_RNA-Seq NAB1-HDAC4 NAB1 chr2 191514086 + HDAC4 chr2 240274613 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 5'UTR-5'UTR Intra-chr q32.2 q37.3 48490 ChimerSeq STARFusion TCGA_RNA-Seq NDFIP2-GLS NDFIP2 chr13 80113910 + GLS chr2 191765290 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Inter-chr q31.1 q32.2 Tumor suppressor gene 48491 ChimerSeq STARFusion TCGA_RNA-Seq NFATC3-SNRPA1 NFATC3 chr16 68119687 + SNRPA1 chr15 101827215 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Inter-chr q22.1 Transcription factor q26.3 48492 ChimerSeq STARFusion TCGA_RNA-Seq NOC4L-CAPN15 NOC4L chr12 132633440 + CAPN15 chr16 596817 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Inter-chr q24.33 p13.3 48493 ChimerSeq STARFusion TCGA_RNA-Seq NOP56-OCIAD2 NOP56 chr20 2634039 + OCIAD2 chr4 48894906 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 In-Frame Inter-chr p13 p11 48494 ChimerSeq STARFusion TCGA_RNA-Seq NRBP1-NPAS2 NRBP1 chr2 27660227 + NPAS2 chr2 101584743 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Intra-chr p23.3 Other:NRBP Tumor suppressor gene q11.2 Tumor suppressor gene Transcription factor 48495 ChimerSeq STARFusion TCGA_RNA-Seq PACSIN2-ARFGAP3 PACSIN2 chr22 43411027 - ARFGAP3 chr22 43243638 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 5'UTR-CDS Intra-chr q13.2 q13.2 48496 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD1-PXDNL PCMTD1 chr8 52744004 - PXDNL chr8 52567320 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 48497 ChimerSeq STARFusion TCGA_RNA-Seq PIEZO1-SLC7A5 PIEZO1 chr16 88851309 - SLC7A5 chr16 87874761 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 In-Frame Intra-chr q24.3 q24.2 48498 ChimerSeq STARFusion TCGA_RNA-Seq POLK-TBCA POLK chr5 74848416 + TBCA chr5 76989177 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 In-Frame Intra-chr q13.3 q14.1 48499 ChimerSeq STARFusion TCGA_RNA-Seq PTDSS2-NOSIP PTDSS2 chr11 460288 + NOSIP chr19 50063949 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 CDS-5'UTR Inter-chr q13.33 48500 ChimerSeq STARFusion TCGA_RNA-Seq RABL3-RPL24 RABL3 chr3 120461309 - RPL24 chr3 101404772 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Intra-chr q13.33 q12.3 48501 ChimerSeq STARFusion TCGA_RNA-Seq RCN2-IVNS1ABP RCN2 chr15 77228063 + IVNS1ABP chr1 185274775 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 In-Frame Inter-chr q24.3 q25.3 48502 ChimerSeq STARFusion TCGA_RNA-Seq RCN2-SCAPER RCN2 chr15 77228063 + SCAPER chr15 76958130 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 In-Frame Intra-chr q24.3 q24.3 Seq+ 48503 ChimerSeq STARFusion TCGA_RNA-Seq RPRD1A-PIK3C3 RPRD1A chr18 33647217 - PIK3C3 chr18 39567776 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Intra-chr q12.2 q12.3 48504 ChimerSeq STARFusion TCGA_RNA-Seq RPS24-HSPG2 RPS24 chr10 79797062 + HSPG2 chr1 22192302 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 In-Frame Inter-chr q22.3 p36.12 48505 ChimerSeq STARFusion TCGA_RNA-Seq RTF1-H2AFV RTF1 chr15 41730629 + H2AFV chr7 44874161 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 In-Frame Inter-chr q15.1 p13 Seq+ 48506 ChimerSeq STARFusion TCGA_RNA-Seq SLC38A1-GBAS SLC38A1 chr12 46596793 - GBAS chr7 56065059 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Inter-chr q13.11 48507 ChimerSeq STARFusion TCGA_RNA-Seq SMIM13-NEDD9 SMIM13 chr6 11094622 + NEDD9 chr6 11193925 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Intra-chr p24.2 p24.2 48508 ChimerSeq STARFusion TCGA_RNA-Seq SNHG5-KBTBD2 SNHG5 chr6 86387672 - KBTBD2 chr7 32919554 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 3'UTR-5'UTR Inter-chr q14.3 p14.3 48509 ChimerSeq STARFusion TCGA_RNA-Seq SPATA13-CDKN2A SPATA13 chr13 24735071 + CDKN2A chr9 21971207 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 5'UTR-CDS Inter-chr q12.12 p21.3 Oncogene Tumor suppressor gene 48510 ChimerSeq STARFusion TCGA_RNA-Seq SPATA13-MICU2 SPATA13 chr13 24735071 + MICU2 chr13 22141083 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Intra-chr q12.12 q12.11 48511 ChimerSeq STARFusion TCGA_RNA-Seq SPOP-RNPS1 SPOP chr17 47755295 - RNPS1 chr16 2314761 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 5'UTR-5'UTR Inter-chr q21.33 Oncogene Tumor suppressor gene p13.3 48512 ChimerSeq STARFusion TCGA_RNA-Seq STXBP5-PPIL4 STXBP5 chr6 147527204 + PPIL4 chr6 149833438 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 In-Frame Intra-chr q24.3 q25.1 48513 ChimerSeq STARFusion TCGA_RNA-Seq SUB1-NPR3 SUB1 chr5 32591791 + NPR3 chr5 32724804 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Intra-chr p13.3 p13.3 48514 ChimerSeq STARFusion TCGA_RNA-Seq SYN2-VGLL4 SYN2 chr3 12046428 + VGLL4 chr3 11744521 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 CDS-5'UTR Intra-chr p25.2 p25.2 48515 ChimerSeq STARFusion TCGA_RNA-Seq TRIM52-ZNF100 TRIM52 chr5 180687002 - ZNF100 chr19 21910791 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Inter-chr q35.3 p12 Transcription factor 48516 ChimerSeq STARFusion TCGA_RNA-Seq TXNL4A-XPO1 TXNL4A chr18 77748240 - XPO1 chr2 61761038 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 CDS-5'UTR Inter-chr q23 p15 Oncogene 48517 ChimerSeq STARFusion TCGA_RNA-Seq UBR5-SEC31A UBR5 chr8 103424401 - SEC31A chr4 83750211 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Inter-chr q22.3 Oncogene q21.22 48518 ChimerSeq STARFusion TCGA_RNA-Seq UTP14A-SPTAN1 UTP14A chrX 129041418 + SPTAN1 chr9 131362359 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 In-Frame Inter-chr q26.1 q34.11 48519 ChimerSeq STARFusion TCGA_RNA-Seq WDR34-GIGYF2 WDR34 chr9 131402970 - GIGYF2 chr2 233565295 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 CDS-5'UTR Inter-chr q34.11 q37.1 48520 ChimerSeq STARFusion TCGA_RNA-Seq ZNF19-RANBP10 ZNF19 chr16 71598796 - RANBP10 chr16 67778358 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 5'UTR-CDS Intra-chr q22.2 Transcription factor q22.1 48521 ChimerSeq STARFusion TCGA_RNA-Seq ZNF251-TUBGCP6 ZNF251 chr8 145979068 - TUBGCP6 chr22 50658444 - Exonic hg19 STAD TCGA-BR-8678-01A 2 0 In-Frame Inter-chr Transcription factor q13.33 48522 ChimerSeq STARFusion TCGA_RNA-Seq ZNF785-MYEOV ZNF785 chr16 30596488 - MYEOV chr11 69156278 + Exonic hg19 STAD TCGA-BR-8678-01A 2 0 Out-of-frame Inter-chr p11.2 Transcription factor q13.3 48523 ChimerSeq STARFusion TCGA_RNA-Seq PAK1-INTS4 PAK1 chr11 77184597 - INTS4 chr11 77618856 - Exonic hg19 STAD TCGA-CD-5800-01A 57 3 5'UTR-CDS Intra-chr q14.1 STE:STE20 q14.1 Seq+ 48524 ChimerSeq STARFusion TCGA_RNA-Seq RAB3D-MLLT1 RAB3D chr19 11446123 - MLLT1 chr19 6227113 - Exonic hg19 STAD TCGA-CD-5800-01A 46 1 Out-of-frame Intra-chr p13.2 p13.3 Seq+ 48525 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-NADK GNB1 chr1 1822259 - NADK chr1 1696885 - Exonic hg19 STAD TCGA-CD-5800-01A 40 3 5'UTR-5'UTR Intra-chr p36.33 p36.33 Seq+ 48526 ChimerSeq STARFusion TCGA_RNA-Seq TYK2-KEAP1 TYK2 chr19 10490291 - KEAP1 chr19 10610756 - Exonic hg19 STAD TCGA-CD-5800-01A 20 2 5'UTR-5'UTR Intra-chr p13.2 TK:JakA p13.2 Oncogene Seq+ 48527 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L3-DPF1 SIPA1L3 chr19 38633350 + DPF1 chr19 38704396 - Exonic hg19 STAD TCGA-CD-5800-01A 19 2 Out-of-frame Intra-chr q13.13 q13.2 Transcription factor Seq+ 48528 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-UBE2D2 MATR3 chr5 138661973 + UBE2D2 chr5 138979957 + Exonic hg19 STAD TCGA-CD-5800-01A 12 0 In-Frame Intra-chr q31.2 q31.2 Seq+ 48529 ChimerSeq STARFusion TCGA_RNA-Seq EIF2S1-RAD51B EIF2S1 chr14 67847482 + RAD51B chr14 68758601 + Exonic hg19 STAD TCGA-CD-5800-01A 11 0 Out-of-frame Intra-chr q23.3 q24.1 Seq+ 48530 ChimerSeq STARFusion TCGA_RNA-Seq ATE1-POLRMT ATE1 chr10 123687505 - POLRMT chr19 633530 - Exonic hg19 STAD TCGA-HU-A4GN-01A 4 0 Out-of-frame Inter-chr q26.13 p13.3 48531 ChimerSeq STARFusion TCGA_RNA-Seq C6orf141-ZNF529 C6orf141 chr6 49522870 + ZNF529 chr19 37073608 - Exonic hg19 STAD TCGA-HU-A4GN-01A 4 0 Out-of-frame Inter-chr p12.3 q13.12 Transcription factor 48532 ChimerSeq STARFusion TCGA_RNA-Seq WDR34-HACE1 WDR34 chr9 131418820 - HACE1 chr6 105272782 - Exonic hg19 STAD TCGA-HU-A4GN-01A 4 0 Out-of-frame Inter-chr q34.11 q16.3 Tumor suppressor gene 48533 ChimerSeq STARFusion TCGA_RNA-Seq OR2I1P-UBD OR2I1P chr6 29521308 + UBD chr6 29527507 - Exonic hg19 STAD TCGA-HU-A4GN-01A 3 1 Out-of-frame Intra-chr 48534 ChimerSeq STARFusion TCGA_RNA-Seq OR2I1P-UBD OR2I1P chr6 29521314 + UBD chr6 29527501 - Exonic hg19 STAD TCGA-HU-A4GN-01A 3 1 Out-of-frame Intra-chr 48535 ChimerSeq STARFusion TCGA_RNA-Seq DSE-LMBRD1 DSE chr6 116580130 + LMBRD1 chr6 70451769 - Exonic hg19 STAD TCGA-HU-A4GN-01A 3 0 5'UTR-CDS Intra-chr q22.1 q13 48536 ChimerSeq STARFusion TCGA_RNA-Seq EZR-CD74 EZR chr6 159191869 - CD74 chr5 149792314 - Exonic hg19 STAD TCGA-HU-A4GN-01A 3 0 Out-of-frame Inter-chr q25.3 q33.1 48537 ChimerSeq STARFusion TCGA_RNA-Seq GPRC5A-MKI67 GPRC5A chr12 13044598 + MKI67 chr10 129917583 - Exonic hg19 STAD TCGA-HU-A4GN-01A 3 0 5'UTR-CDS Inter-chr p13.1 Tumor suppressor gene q26.2 48538 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-PCNP MALAT1 chr11 65267149 + PCNP chr3 101293065 + Exonic hg19 STAD TCGA-HU-A4GN-01A 3 0 Out-of-frame Inter-chr q13.1 q12.3 48539 ChimerSeq STARFusion TCGA_RNA-Seq PANK4-HELZ2 PANK4 chr1 2442187 - HELZ2 chr20 62205589 - Exonic hg19 STAD TCGA-HU-A4GN-01A 3 0 Out-of-frame Inter-chr p36.32 q13.33 48540 ChimerSeq STARFusion TCGA_RNA-Seq RFC3-LRRFIP1 RFC3 chr13 34411287 + LRRFIP1 chr2 238682504 + Exonic hg19 STAD TCGA-HU-A4GN-01A 3 0 Out-of-frame Inter-chr q13.2 q37.3 48541 ChimerSeq STARFusion TCGA_RNA-Seq SDHB-NLRP2 SDHB chr1 17380443 - NLRP2 chr19 55505637 + Exonic hg19 STAD TCGA-HU-A4GN-01A 3 0 Out-of-frame Inter-chr p36.13 Oncogene Tumor suppressor gene 48542 ChimerSeq STARFusion TCGA_RNA-Seq SEPT2-CD55 SEPT2 chr2 242255025 + CD55 chr1 207510164 + Exonic hg19 STAD TCGA-HU-A4GN-01A 3 0 5'UTR-CDS Inter-chr q37.3 q32.2 48543 ChimerSeq STARFusion TCGA_RNA-Seq PTPRU-C10orf76 PTPRU chr1 29587415 + C10orf76 chr10 103699695 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 1 In-Frame Inter-chr p35.3 q24.32 48544 ChimerSeq STARFusion TCGA_RNA-Seq USP34-XPO1 USP34 chr2 61632843 - XPO1 chr2 61711240 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 1 In-Frame Intra-chr p15 p15 Oncogene Seq+ 48545 ChimerSeq STARFusion TCGA_RNA-Seq AAMP-ANKZF1 AAMP chr2 219134105 - ANKZF1 chr2 220096650 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr q35 q35 Transcription factor 48546 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-GDI2 ACTB chr7 5568792 - GDI2 chr10 5808115 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 3'UTR-CDS Inter-chr p22.1 p15.1 48547 ChimerSeq STARFusion TCGA_RNA-Seq ADAP1-GET4 ADAP1 chr7 959605 - GET4 chr7 934971 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr p22.3 p22.3 Seq+ 48548 ChimerSeq STARFusion TCGA_RNA-Seq ADAP1-SUN1 ADAP1 chr7 959605 - SUN1 chr7 934971 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 CDS-3'UTR Intra-chr p22.3 p22.3 Seq+ 48549 ChimerSeq STARFusion TCGA_RNA-Seq AFF4-AGAP1 AFF4 chr5 132298951 - AGAP1 chr2 236945205 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-CDS Inter-chr q31.1 q37.2 48550 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-DDX5 AGO2 chr8 141595218 - DDX5 chr17 62500960 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Inter-chr q24.3 q23.3 48551 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT3-RBBP8 AGPAT3 chr21 45323900 + RBBP8 chr18 20516717 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-5'UTR Inter-chr q22.3 q11.2 Tumor suppressor gene 48552 ChimerSeq STARFusion TCGA_RNA-Seq AKT1-ITPK1 AKT1 chr14 105258935 - ITPK1 chr14 93542964 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr q32.33 AGC:Akt Oncogene 48553 ChimerSeq STARFusion TCGA_RNA-Seq ALG10B-MPRIP ALG10B chr12 38712260 + MPRIP chr17 16979024 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr q12 p11.2 48554 ChimerSeq STARFusion TCGA_RNA-Seq ALG6-MACF1 ALG6 chr1 63836730 + MACF1 chr1 39898207 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr p31.3 p34.3 48555 ChimerSeq STARFusion TCGA_RNA-Seq AMPD3-STX8 AMPD3 chr11 10483287 + STX8 chr17 9281970 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Inter-chr p15.4 p13.1 48556 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD32-IQGAP2 ANKRD32 chr5 93966448 + IQGAP2 chr5 75902004 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr q13.3 Tumor suppressor gene 48557 ChimerSeq STARFusion TCGA_RNA-Seq ARRDC2-PRRC2B ARRDC2 chr19 18112382 + PRRC2B chr9 134353861 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr p13.11 q34.13 48558 ChimerSeq STARFusion TCGA_RNA-Seq ASPH-KCTD3 ASPH chr8 62563609 - KCTD3 chr1 215768698 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr q12.3 q41 48559 ChimerSeq STARFusion TCGA_RNA-Seq ASRGL1-STX5 ASRGL1 chr11 62105639 + STX5 chr11 62575100 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr q12.3 q12.3 48560 ChimerSeq STARFusion TCGA_RNA-Seq ATP5I-PSMC2 ATP5I chr4 667092 - PSMC2 chr7 102994368 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr p16.3 q22.1 48561 ChimerSeq STARFusion TCGA_RNA-Seq BACE2-MRPS6 BACE2 chr21 42540502 + MRPS6 chr21 35497641 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr q22.2 q22.11 48562 ChimerSeq STARFusion TCGA_RNA-Seq BAZ2B-TANC1 BAZ2B chr2 160472753 - TANC1 chr2 159992705 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-CDS Intra-chr q24.2 Transcription factor q24.2 48563 ChimerSeq STARFusion TCGA_RNA-Seq C11orf54-EPB41 C11orf54 chr11 93480614 + EPB41 chr1 29379616 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr q21 p35.3 Tumor suppressor gene 48564 ChimerSeq STARFusion TCGA_RNA-Seq C11orf54-SMCO4 C11orf54 chr11 93474894 + SMCO4 chr11 93232514 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr q21 q21 48565 ChimerSeq STARFusion TCGA_RNA-Seq C2orf15-EIF5B C2orf15 chr2 99804720 + EIF5B chr2 99980734 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 3'UTR-CDS Intra-chr q11.2 q11.2 48566 ChimerSeq STARFusion TCGA_RNA-Seq C7orf50-MAD1L1 C7orf50 chr7 1166893 - MAD1L1 chr7 1976533 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 48567 ChimerSeq STARFusion TCGA_RNA-Seq CALU-PAXIP1 CALU chr7 128379486 + PAXIP1 chr7 154775042 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-CDS Intra-chr q32.1 q36.2 48568 ChimerSeq STARFusion TCGA_RNA-Seq CAPN1-PFDN5 CAPN1 chr11 64976858 + PFDN5 chr12 53691634 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr q13.1 q13.13 48569 ChimerSeq STARFusion TCGA_RNA-Seq CAPN15-CTBP1 CAPN15 chr16 586142 + CTBP1 chr4 1235307 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Inter-chr p13.3 p16.3 48570 ChimerSeq STARFusion TCGA_RNA-Seq CASC4-MKLN1 CASC4 chr15 44630515 + MKLN1 chr7 131163382 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Inter-chr q15.3 q32.3 48571 ChimerSeq STARFusion TCGA_RNA-Seq CCAT1-PCAT2 CCAT1 chr8 128231055 - PCAT2 chr8 128091378 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr q24.21 q24.21 48572 ChimerSeq STARFusion TCGA_RNA-Seq CCDC12-SCAP CCDC12 chr3 47017843 - SCAP chr3 47484581 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 CDS-5'UTR Intra-chr p21.31 p21.31 48573 ChimerSeq STARFusion TCGA_RNA-Seq CENPJ-EXOSC8 CENPJ chr13 25466781 - EXOSC8 chr13 37583321 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr q12.13 q13.3 48574 ChimerSeq STARFusion TCGA_RNA-Seq CEP70-MAP7 CEP70 chr3 138224137 - MAP7 chr6 136687577 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr q22.3 q23.3 48575 ChimerSeq STARFusion TCGA_RNA-Seq CLASP1-SEPT10 CLASP1 chr2 122363277 - SEPT10 chr2 110350696 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr q14.3 q13 48576 ChimerSeq STARFusion TCGA_RNA-Seq CLTB-STK10 CLTB chr5 175824608 - STK10 chr5 171510088 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr q35.2 q35.1 Tumor suppressor gene 48577 ChimerSeq STARFusion TCGA_RNA-Seq CMIP-NEDD4L CMIP chr16 81479146 + NEDD4L chr18 55833020 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr q23.2 q21.31 Tumor suppressor gene 48578 ChimerSeq STARFusion TCGA_RNA-Seq CNOT2-PKP2 CNOT2 chr12 70672054 + PKP2 chr12 33021996 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr q15 p11.21 48579 ChimerSeq STARFusion TCGA_RNA-Seq COQ4-TIMP1 COQ4 chr9 131087518 + TIMP1 chrX 47445920 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Inter-chr q34.11 p11.3 48580 ChimerSeq STARFusion TCGA_RNA-Seq COX19-GET4 COX19 chr7 959605 - GET4 chr7 934971 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 3'UTR-CDS Intra-chr p22.3 p22.3 48581 ChimerSeq STARFusion TCGA_RNA-Seq COX19-SUN1 COX19 chr7 959605 - SUN1 chr7 934971 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr p22.3 p22.3 48582 ChimerSeq STARFusion TCGA_RNA-Seq DECR1-PRPF18 DECR1 chr8 91031400 + PRPF18 chr10 13647631 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr q21.3 p13 48583 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-MARS DNM2 chr19 10897382 + MARS chr12 57891940 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr p13.2 q13.3 48584 ChimerSeq STARFusion TCGA_RNA-Seq ECT2-NCEH1 ECT2 chr3 172468647 + NCEH1 chr3 172365904 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-5'UTR Intra-chr q26.31 Tumor suppressor gene q26.31 48585 ChimerSeq STARFusion TCGA_RNA-Seq ELF1-ELOVL5 ELF1 chr13 41634974 - ELOVL5 chr6 53160505 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-5'UTR Inter-chr q14.11 Transcription factor p12.1 48586 ChimerSeq STARFusion TCGA_RNA-Seq EMC4-PARK7 EMC4 chr15 34520047 + PARK7 chr1 8037712 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Inter-chr q14 p36.23 Tumor suppressor gene 48587 ChimerSeq STARFusion TCGA_RNA-Seq EZH2-ESYT2 EZH2 chr7 148581256 - ESYT2 chr7 158591763 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-CDS Intra-chr q36.1 Oncogene Tumor suppressor gene q36.3 48588 ChimerSeq STARFusion TCGA_RNA-Seq EZR-QKI EZR chr6 159239114 - QKI chr6 163876311 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr q25.3 q26 48589 ChimerSeq STARFusion TCGA_RNA-Seq FAM114A1-BRD3 FAM114A1 chr4 38869455 + BRD3 chr9 136913576 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-CDS Inter-chr p14 q34.2 Atypical:BRD Oncogene Seq+ 48590 ChimerSeq STARFusion TCGA_RNA-Seq FARS2-LYRM4 FARS2 chr6 5261893 + LYRM4 chr6 5216971 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-CDS Intra-chr p25.1 p25.1 Seq+ 48591 ChimerSeq STARFusion TCGA_RNA-Seq FUCA2-RCC2 FUCA2 chr6 143818526 - RCC2 chr1 17739674 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Inter-chr q24.2 48592 ChimerSeq STARFusion TCGA_RNA-Seq FUT8-ATF7IP2 FUT8 chr14 65879932 + ATF7IP2 chr16 10567336 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-5'UTR Inter-chr q23.3 p13.2 48593 ChimerSeq STARFusion TCGA_RNA-Seq GAN-SLAIN2 GAN chr16 81348885 + SLAIN2 chr4 48422142 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Inter-chr q23.2 p11 48594 ChimerSeq STARFusion TCGA_RNA-Seq GNS-RASSF3 GNS chr12 65152865 - RASSF3 chr12 65078567 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr q14.3 q14.2 Tumor suppressor gene Seq+ 48595 ChimerSeq STARFusion TCGA_RNA-Seq HK1-PDLIM1 HK1 chr10 71078766 + PDLIM1 chr10 97007123 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr q22.1 q23.33 48596 ChimerSeq STARFusion TCGA_RNA-Seq HLCS-RRBP1 HLCS chr21 38334336 - RRBP1 chr20 17641173 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-5'UTR Inter-chr q22.13 p12.1 48597 ChimerSeq STARFusion TCGA_RNA-Seq HS6ST1-MCPH1 HS6ST1 chr2 129075611 - MCPH1 chr8 6289020 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr q14.3 p23.1 Tumor suppressor gene 48598 ChimerSeq STARFusion TCGA_RNA-Seq HSPA9-RARS HSPA9 chr5 137893091 - RARS chr5 167915607 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr q31.2 q34 48599 ChimerSeq STARFusion TCGA_RNA-Seq INPP5K-SENP3 INPP5K chr17 1419182 - SENP3 chr17 7473674 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-CDS Intra-chr p13.3 p13.1 48600 ChimerSeq STARFusion TCGA_RNA-Seq ITPR3-EI24 ITPR3 chr6 33589468 + EI24 chr11 125442354 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 CDS-5'UTR Inter-chr p21.31 q24.2 Tumor suppressor gene 48601 ChimerSeq STARFusion TCGA_RNA-Seq KLF12-PIBF1 KLF12 chr13 74518118 - PIBF1 chr13 73505303 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr q22.1 Transcription factor q21.33 48602 ChimerSeq STARFusion TCGA_RNA-Seq KMT2C-PDE8A KMT2C chr7 151900019 - PDE8A chr15 85607601 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Inter-chr q36.1 Oncogene Tumor suppressor gene q25.3 48603 ChimerSeq STARFusion TCGA_RNA-Seq KPNA1-AQR KPNA1 chr3 122215284 - AQR chr15 35219339 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr q21.1 q14 48604 ChimerSeq STARFusion TCGA_RNA-Seq LAMB3-ASPM LAMB3 chr1 209811253 - ASPM chr1 197056102 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr q32.2 q31.3 48605 ChimerSeq STARFusion TCGA_RNA-Seq LIMS1-INPP5F LIMS1 chr2 109151050 + INPP5F chr10 121541147 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Inter-chr q12.3 q26.11 48606 ChimerSeq STARFusion TCGA_RNA-Seq LMNB2-BMS1 LMNB2 chr19 2434999 - BMS1 chr10 43297585 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr p13.3 q11.21 48607 ChimerSeq STARFusion TCGA_RNA-Seq LSM14A-LYN LSM14A chr19 34706566 + LYN chr8 56879274 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr q12.1 TK:Src 48608 ChimerSeq STARFusion TCGA_RNA-Seq LYST-GLS LYST chr1 235866047 - GLS chr2 191827556 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Inter-chr q42.3 q32.2 Tumor suppressor gene 48609 ChimerSeq STARFusion TCGA_RNA-Seq MECOM-LPP MECOM chr3 169381124 - LPP chr3 188242453 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr q26.2 Transcription factor q27.3 Oncogene 48610 ChimerSeq STARFusion TCGA_RNA-Seq MED26-PDHX MED26 chr19 16738683 - PDHX chr11 34969053 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Inter-chr p13.11 p13 48611 ChimerSeq STARFusion TCGA_RNA-Seq MINK1-PELP1 MINK1 chr17 4736935 + PELP1 chr17 4586247 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr p13.2 p13.2 48612 ChimerSeq STARFusion TCGA_RNA-Seq MMS22L-FBXL4 MMS22L chr6 97676770 - FBXL4 chr6 99382755 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 CDS-5'UTR Intra-chr q16.1 q16.2 48613 ChimerSeq STARFusion TCGA_RNA-Seq MRPL30-EIF5B MRPL30 chr2 99804720 + EIF5B chr2 99980734 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr q11.2 q11.2 48614 ChimerSeq STARFusion TCGA_RNA-Seq MRPL30-EIF5B MRPL30 chr2 99804720 + EIF5B chr2 99980734 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr q11.2 q11.2 48615 ChimerSeq STARFusion TCGA_RNA-Seq MYO1E-RGS3 MYO1E chr15 59664697 - RGS3 chr9 116299076 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr q22.2 q32 48616 ChimerSeq STARFusion TCGA_RNA-Seq NAA35-RMI1 NAA35 chr9 88557198 + RMI1 chr9 86614624 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 CDS-5'UTR Intra-chr q21.33 q21.32 48617 ChimerSeq STARFusion TCGA_RNA-Seq NDUFS4-MTFMT NDUFS4 chr5 52942235 + MTFMT chr15 65297274 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Inter-chr q11.2 q22.31 48618 ChimerSeq STARFusion TCGA_RNA-Seq NFKB1-PSMG2 NFKB1 chr4 103422945 + PSMG2 chr18 12724498 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-CDS Inter-chr q24 Oncogene Tumor suppressor gene Transcription factor p11.21 48619 ChimerSeq STARFusion TCGA_RNA-Seq NFXL1-CORIN NFXL1 chr4 47912841 - CORIN chr4 47809064 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr p12 Transcription factor p12 Seq+ 48620 ChimerSeq STARFusion TCGA_RNA-Seq NHSL1-PHACTR2 NHSL1 chr6 138866760 - PHACTR2 chr6 144128194 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-CDS Intra-chr q24.1 q24.2 48621 ChimerSeq STARFusion TCGA_RNA-Seq NLK-NCOR1 NLK chr17 26499644 + NCOR1 chr17 16052831 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr q11.2 CMGC:MAPK p11.2 Oncogene 48622 ChimerSeq STARFusion TCGA_RNA-Seq NSUN5-MRPL49 NSUN5 chr7 72722428 - MRPL49 chr11 64891974 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr q11.23 q13.1 48623 ChimerSeq STARFusion TCGA_RNA-Seq PAPOLA-ITPK1 PAPOLA chr14 96968937 + ITPK1 chr14 93418358 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr q32.2 48624 ChimerSeq STARFusion TCGA_RNA-Seq PDLIM5-KLHL3 PDLIM5 chr4 95445026 + KLHL3 chr5 137045545 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr q22.3 q31.2 48625 ChimerSeq STARFusion TCGA_RNA-Seq PELI1-VRK2 PELI1 chr2 64371215 - VRK2 chr2 58350236 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-5'UTR Intra-chr p14 p16.1 CK1:VRK 48626 ChimerSeq STARFusion TCGA_RNA-Seq PFKP-GDI2 PFKP chr10 3109899 + GDI2 chr10 5842668 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr p15.2 p15.1 Seq+ 48627 ChimerSeq STARFusion TCGA_RNA-Seq PGK1-ERCC6L PGK1 chrX 77359902 + ERCC6L chrX 71428548 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr q21.1 q13.1 48628 ChimerSeq STARFusion TCGA_RNA-Seq PHF3-PTP4A1 PHF3 chr6 64346055 + PTP4A1 chr6 64286341 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-5'UTR Intra-chr q12 q12 48629 ChimerSeq STARFusion TCGA_RNA-Seq PHF3-SCAF8 PHF3 chr6 64356700 + SCAF8 chr6 155095123 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr q12 q25.2 48630 ChimerSeq STARFusion TCGA_RNA-Seq PKMYT1-EEF1D PKMYT1 chr16 3029649 - EEF1D chr8 144669022 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Inter-chr p13.3 48631 ChimerSeq STARFusion TCGA_RNA-Seq PKN3-FAM118A PKN3 chr9 131465218 + FAM118A chr22 45726484 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr q34.11 AGC:PKN q13.31 48632 ChimerSeq STARFusion TCGA_RNA-Seq PPP3CA-UBE2D3 PPP3CA chr4 102267896 - UBE2D3 chr4 103731012 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr q24 q24 48633 ChimerSeq STARFusion TCGA_RNA-Seq PPP4R1L-TAF4 PPP4R1L chr20 56884282 - TAF4 chr20 60589763 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 3'UTR-CDS Intra-chr q13.32 48634 ChimerSeq STARFusion TCGA_RNA-Seq PQLC3-PKM PQLC3 chr2 11300820 + PKM chr15 72513625 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Inter-chr p25.1 q23 48635 ChimerSeq STARFusion TCGA_RNA-Seq PRDM11-CD82 PRDM11 chr11 45204674 + CD82 chr11 44636822 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr p11.2 Tumor suppressor gene p11.2 Tumor suppressor gene 48636 ChimerSeq STARFusion TCGA_RNA-Seq PRKCZ-SKI PRKCZ chr1 2106752 + SKI chr1 2234417 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr p36.33 p36.33 Transcription factor Seq+ 48637 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-NPIPB5 PTK2 chr8 142011224 - NPIPB5 chr16 22524745 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Inter-chr q24.3 p12.2 48638 ChimerSeq STARFusion TCGA_RNA-Seq RAB21-RAP1B RAB21 chr12 72149068 + RAP1B chr12 69047892 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr q21.1 q15 48639 ChimerSeq STARFusion TCGA_RNA-Seq RAB40C-GNAS RAB40C chr16 640433 + GNAS chr20 57470667 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr p13.3 q13.32 Oncogene 48640 ChimerSeq STARFusion TCGA_RNA-Seq RALA-ZNRF2 RALA chr7 39663424 + ZNRF2 chr7 30363258 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-CDS Intra-chr p14.1 p14.3 48641 ChimerSeq STARFusion TCGA_RNA-Seq RALGPS1-PSMB1 RALGPS1 chr9 129677291 + PSMB1 chr6 170858201 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-CDS Inter-chr q33.3 48642 ChimerSeq STARFusion TCGA_RNA-Seq RASEF-UBQLN1 RASEF chr9 85630720 - UBQLN1 chr9 86293514 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr q21.32 q21.32 48643 ChimerSeq STARFusion TCGA_RNA-Seq RBM23-PICALM RBM23 chr14 23388208 - PICALM chr11 85742653 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-5'UTR Inter-chr q11.2 q14.2 48644 ChimerSeq STARFusion TCGA_RNA-Seq RBM47-WDR43 RBM47 chr4 40468594 - WDR43 chr2 29150435 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-CDS Inter-chr p14 p23.2 48645 ChimerSeq STARFusion TCGA_RNA-Seq RBPJ-SMARCA2 RBPJ chr4 26165236 + SMARCA2 chr9 2181571 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-CDS Inter-chr p15.2 Transcription factor p24.3 Tumor suppressor gene 48646 ChimerSeq STARFusion TCGA_RNA-Seq RGS11-AATK RGS11 chr16 324976 - AATK chr17 79102349 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Inter-chr p13.3 q25.3 48647 ChimerSeq STARFusion TCGA_RNA-Seq RHOT2-PLP2 RHOT2 chr16 719606 + PLP2 chrX 49029476 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr p13.3 p11.23 48648 ChimerSeq STARFusion TCGA_RNA-Seq RNF126-FAM83H RNF126 chr19 663047 - FAM83H chr8 144812767 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 CDS-5'UTR Inter-chr p13.3 48649 ChimerSeq STARFusion TCGA_RNA-Seq RNF145-MAML1 RNF145 chr5 158621724 - MAML1 chr5 179198148 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr q33.3 48650 ChimerSeq STARFusion TCGA_RNA-Seq RNF214-TTC3 RNF214 chr11 117117664 + TTC3 chr21 38480692 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr q23.3 q22.13 48651 ChimerSeq STARFusion TCGA_RNA-Seq ROCK1-PDE8A ROCK1 chr18 18619433 - PDE8A chr15 85652284 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr q11.1 AGC:DMPK q25.3 48652 ChimerSeq STARFusion TCGA_RNA-Seq ROR1-ALG6 ROR1 chr1 64516388 + ALG6 chr1 63902494 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr p31.3 TK:Ror p31.3 Seq+ 48653 ChimerSeq STARFusion TCGA_RNA-Seq RPL27A-ERN2 RPL27A chr11 8706439 + ERN2 chr16 23714023 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Inter-chr p15.4 p12.2 48654 ChimerSeq STARFusion TCGA_RNA-Seq RPL4-PSMA4 RPL4 chr15 66792394 - PSMA4 chr15 78838917 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr q22.31 q25.1 48655 ChimerSeq STARFusion TCGA_RNA-Seq RTF1-MAP1LC3B RTF1 chr15 41709511 + MAP1LC3B chr16 87435781 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr q15.1 q24.2 48656 ChimerSeq STARFusion TCGA_RNA-Seq RUVBL2-NUCB1 RUVBL2 chr19 49502630 + NUCB1 chr19 49407604 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr q13.33 q13.33 48657 ChimerSeq STARFusion TCGA_RNA-Seq SART3-ATP2A2 SART3 chr12 108938915 - ATP2A2 chr12 110729825 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr q23.3 q24.11 48658 ChimerSeq STARFusion TCGA_RNA-Seq SEC22A-SDHAP1 SEC22A chr3 122978436 + SDHAP1 chr3 195686957 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 CDS-3'UTR Intra-chr q21.1 q29 48659 ChimerSeq STARFusion TCGA_RNA-Seq SENP5-PIGZ SENP5 chr3 196630481 + PIGZ chr3 196678902 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 CDS-5'UTR Intra-chr q29 q29 Seq+ 48660 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L1-NUMB SIPA1L1 chr14 71884913 + NUMB chr14 73833689 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-5'UTR Intra-chr q24.2 q24.3 Tumor suppressor gene 48661 ChimerSeq STARFusion TCGA_RNA-Seq SIRT6-GRAMD4 SIRT6 chr19 4180779 - GRAMD4 chr22 47033737 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Inter-chr p13.3 Tumor suppressor gene q13.31 48662 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A53-DAZAP1 SLC25A53 chrX 103401559 - DAZAP1 chr19 1417499 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-CDS Inter-chr q22.2 p13.3 48663 ChimerSeq STARFusion TCGA_RNA-Seq SLC33A1-FUS SLC33A1 chr3 155571012 - FUS chr16 31199646 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr q25.31 p11.2 Tumor suppressor gene 48664 ChimerSeq STARFusion TCGA_RNA-Seq SLC35G1-ANXA2 SLC35G1 chr10 95653917 + ANXA2 chr15 60656722 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr q23.33 q22.2 48665 ChimerSeq STARFusion TCGA_RNA-Seq SLCO4A1-YTHDF1 SLCO4A1 chr20 61273905 + YTHDF1 chr20 61828086 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-CDS Intra-chr q13.33 q13.33 48666 ChimerSeq STARFusion TCGA_RNA-Seq SMARCA2-NFIB SMARCA2 chr9 2015404 + NFIB chr9 14179779 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-CDS Intra-chr p24.3 Tumor suppressor gene p22.3 Transcription factor 48667 ChimerSeq STARFusion TCGA_RNA-Seq SNHG5-MYCBP2 SNHG5 chr6 86387672 - MYCBP2 chr13 77713471 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 3'UTR-CDS Inter-chr q14.3 q22.3 48668 ChimerSeq STARFusion TCGA_RNA-Seq SNHG7-UBALD1 SNHG7 chr9 139621498 - UBALD1 chr16 4660556 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Inter-chr q34.3 p13.3 48669 ChimerSeq STARFusion TCGA_RNA-Seq SNHG8-HPRT1 SNHG8 chr4 119200292 + HPRT1 chrX 133607389 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-CDS Inter-chr q26 q26.2 48670 ChimerSeq STARFusion TCGA_RNA-Seq SNRNP70-RAD23A SNRNP70 chr19 49593777 + RAD23A chr19 13063503 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr q13.33 p13.13 48671 ChimerSeq STARFusion TCGA_RNA-Seq SPAG9-MMD SPAG9 chr17 49091593 - MMD chr17 53491593 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr q21.33 q22 Seq+ 48672 ChimerSeq STARFusion TCGA_RNA-Seq SPG7-MOB1A SPG7 chr16 89579445 + MOB1A chr2 74394234 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr q24.3 p13.1 Tumor suppressor gene 48673 ChimerSeq STARFusion TCGA_RNA-Seq ST14-ZBTB44 ST14 chr11 130078579 + ZBTB44 chr11 130109791 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr q24.3 q24.3 Transcription factor 48674 ChimerSeq STARFusion TCGA_RNA-Seq STAU2-ADK STAU2 chr8 74585342 - ADK chr10 75960522 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr q21.11 q22.2 48675 ChimerSeq STARFusion TCGA_RNA-Seq TACC2-ATE1 TACC2 chr10 123781529 + ATE1 chr10 123629553 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr q26.13 q26.13 Seq+ 48676 ChimerSeq STARFusion TCGA_RNA-Seq THADA-MTA3 THADA chr2 43655239 - MTA3 chr2 42931337 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr p21 p21 48677 ChimerSeq STARFusion TCGA_RNA-Seq TMEM39A-RRM2 TMEM39A chr3 119165865 - RRM2 chr2 10268975 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Inter-chr q13.33 p25.1 48678 ChimerSeq STARFusion TCGA_RNA-Seq TRA2A-PDHA1 TRA2A chr7 23571408 - PDHA1 chrX 19373467 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr p15.3 p22.12 48679 ChimerSeq STARFusion TCGA_RNA-Seq TRA2B-BCAR1 TRA2B chr3 185655613 - BCAR1 chr16 75276988 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr q27.2 q23.1 48680 ChimerSeq STARFusion TCGA_RNA-Seq TRIM16-PARVA TRIM16 chr17 15546035 - PARVA chr11 12495292 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Inter-chr p12 p15.3 48681 ChimerSeq STARFusion TCGA_RNA-Seq TTC1-CAMK2A TTC1 chr5 159470176 + CAMK2A chr5 149602780 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr q33.3 q32 48682 ChimerSeq STARFusion TCGA_RNA-Seq TUBGCP6-MRPL52 TUBGCP6 chr22 50678633 - MRPL52 chr14 23303381 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Inter-chr q13.33 q11.2 48683 ChimerSeq STARFusion TCGA_RNA-Seq TUFT1-UBE2J2 TUFT1 chr1 151512902 + UBE2J2 chr1 1203372 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 CDS-5'UTR Intra-chr q21.3 p36.33 48684 ChimerSeq STARFusion TCGA_RNA-Seq TXNRD1-EPCAM TXNRD1 chr12 104728110 + EPCAM chr2 47606908 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr q23.3 p21 48685 ChimerSeq STARFusion TCGA_RNA-Seq TYW1-C7orf55 TYW1 chr7 66548526 + C7orf55 chr7 139030247 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr q11.21 48686 ChimerSeq STARFusion TCGA_RNA-Seq TYW1-LUC7L2 TYW1 chr7 66548526 + LUC7L2 chr7 139030247 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr q11.21 q34 48687 ChimerSeq STARFusion TCGA_RNA-Seq UBC-RER1 UBC chr12 125399133 - RER1 chr1 2327223 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-5'UTR Inter-chr q24.31 p36.32 48688 ChimerSeq STARFusion TCGA_RNA-Seq UBE2E3-SLC9A7 UBE2E3 chr2 181848820 + SLC9A7 chrX 46466638 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Inter-chr q31.3 p11.3 48689 ChimerSeq STARFusion TCGA_RNA-Seq UBE2J2-SKI UBE2J2 chr1 1209046 - SKI chr1 2234417 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-CDS Intra-chr p36.33 p36.33 Transcription factor 48690 ChimerSeq STARFusion TCGA_RNA-Seq UBE2W-C9orf3 UBE2W chr8 74791043 - C9orf3 chr9 97848964 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 CDS-3'UTR Inter-chr q21.11 q22.32 48691 ChimerSeq STARFusion TCGA_RNA-Seq UBE2W-MCCC2 UBE2W chr8 74791043 - MCCC2 chr5 70939646 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Inter-chr q21.11 q13.2 48692 ChimerSeq STARFusion TCGA_RNA-Seq UBFD1-GLG1 UBFD1 chr16 23578390 + GLG1 chr16 74491892 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr p12.2 q23.1 48693 ChimerSeq STARFusion TCGA_RNA-Seq UBQLN1-HNRNPK UBQLN1 chr9 86322415 - HNRNPK chr9 86593367 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 CDS-5'UTR Intra-chr q21.32 q21.32 48694 ChimerSeq STARFusion TCGA_RNA-Seq WDR59-GLG1 WDR59 chr16 74919551 - GLG1 chr16 74497377 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr q23.1 q23.1 48695 ChimerSeq STARFusion TCGA_RNA-Seq WRAP73-DCAF6 WRAP73 chr1 3563230 - DCAF6 chr1 167935867 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr p36.32 q24.2 48696 ChimerSeq STARFusion TCGA_RNA-Seq WWP2-CIRH1A WWP2 chr16 69905834 + CIRH1A chr16 69202724 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr q22.1 48697 ChimerSeq STARFusion TCGA_RNA-Seq XPO1-EIF4A2 XPO1 chr2 61722590 - EIF4A2 chr3 186504916 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Inter-chr p15 Oncogene q27.3 48698 ChimerSeq STARFusion TCGA_RNA-Seq XPO7-RPL28 XPO7 chr8 21777299 + RPL28 chr19 55897718 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 CDS-5'UTR Inter-chr p21.3 q13.42 48699 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC7-MELK ZCCHC7 chr9 37126939 + MELK chr9 36630296 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr p13.2 p13.2 CAMK:CAMKL 48700 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-SH3BGRL2 ZFAND3 chr6 37787792 + SH3BGRL2 chr6 80383331 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr p21.2 q14.1 48701 ChimerSeq STARFusion TCGA_RNA-Seq ZMYM6-NDUFB2 ZMYM6 chr1 35496148 - NDUFB2 chr7 140421352 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 CDS-3'UTR Inter-chr p34.3 q34 48702 ChimerSeq STARFusion TCGA_RNA-Seq ZMYM6-NDUFB2 ZMYM6 chr1 35496148 - NDUFB2 chr7 140421352 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 CDS-3'UTR Inter-chr p34.3 q34 48703 ChimerSeq STARFusion TCGA_RNA-Seq ZNF331-FAM192A ZNF331 chr19 54059162 + FAM192A chr16 57207781 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-5'UTR Inter-chr q13.42 Transcription factor q13 Seq+ 48704 ChimerSeq STARFusion TCGA_RNA-Seq ZNF519-NUDCD3 ZNF519 chr18 14124349 - NUDCD3 chr7 44524883 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Inter-chr p11.21 Transcription factor p13 48705 ChimerSeq STARFusion TCGA_RNA-Seq ZNF638-RPS27A ZNF638 chr2 71627648 + RPS27A chr2 55460499 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 In-Frame Intra-chr p13.3 p16.1 48706 ChimerSeq STARFusion TCGA_RNA-Seq ZNF74-RBFOX2 ZNF74 chr22 20748952 + RBFOX2 chr22 36334945 - Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr q11.21 Transcription factor 48707 ChimerSeq STARFusion TCGA_RNA-Seq ZNF83-PPP2R2A ZNF83 chr19 53158814 - PPP2R2A chr8 26221237 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 5'UTR-CDS Inter-chr q13.41 Transcription factor p21.2 48708 ChimerSeq STARFusion TCGA_RNA-Seq ZRANB1-R3HCC1L ZRANB1 chr10 126631876 + R3HCC1L chr10 99915850 + Exonic hg19 STAD TCGA-HU-A4GN-01A 2 0 Out-of-frame Intra-chr q26.13 q24.2 48709 ChimerSeq STARFusion TCGA_RNA-Seq KCMF1-DNAH6 KCMF1 chr2 85198590 + DNAH6 chr2 85023430 + Exonic hg19 STAD TCGA-BR-8361-01A 173 69 In-Frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 48710 ChimerSeq STARFusion TCGA_RNA-Seq POGZ-PI4KB POGZ chr1 151431628 - PI4KB chr1 151267017 - Exonic hg19 STAD TCGA-BR-8361-01A 23 18 5'UTR-CDS Intra-chr q21.3 q21.3 Seq+ 48711 ChimerSeq STARFusion TCGA_RNA-Seq PLXNA3-ATP6AP1 PLXNA3 chrX 153699981 + ATP6AP1 chrX 153660176 + Exonic hg19 STAD TCGA-BR-8361-01A 22 9 In-Frame Intra-chr q28 q28 Seq+ 48712 ChimerSeq STARFusion TCGA_RNA-Seq SDHC-KLHDC9 SDHC chr1 161326630 + KLHDC9 chr1 161069851 + Exonic hg19 STAD TCGA-BR-8361-01A 22 6 Out-of-frame Intra-chr q23.3 Oncogene q23.3 Seq+ 48713 ChimerSeq STARFusion TCGA_RNA-Seq CLASRP-PPP1R37 CLASRP chr19 45543569 + PPP1R37 chr19 45648465 + Exonic hg19 STAD TCGA-BR-8361-01A 16 5 Out-of-frame Intra-chr q13.32 q13.32 Seq+ 48714 ChimerSeq STARFusion TCGA_RNA-Seq MINPP1-LINC00864 MINPP1 chr10 89280926 + LINC00864 chr10 89157957 - Exonic hg19 STAD TCGA-BR-8361-01A 13 14 Out-of-frame Intra-chr q23.2 q23.2 48715 ChimerSeq STARFusion TCGA_RNA-Seq HEATR2-SUN1 HEATR2 chr7 781102 + SUN1 chr7 905589 + Exonic hg19 STAD TCGA-BR-8361-01A 12 0 In-Frame Intra-chr p22.3 48716 ChimerSeq STARFusion TCGA_RNA-Seq PPL-ADCY9 PPL chr16 4986985 - ADCY9 chr16 4057559 - Exonic hg19 STAD TCGA-BR-8361-01A 11 1 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 48717 ChimerSeq STARFusion TCGA_RNA-Seq CLASRP-PPP1R37 CLASRP chr19 45543569 + PPP1R37 chr19 45648352 + Exonic hg19 STAD TCGA-BR-8361-01A 9 5 Out-of-frame Intra-chr q13.32 q13.32 Seq+ 48718 ChimerSeq STARFusion TCGA_RNA-Seq POGZ-PI4KB POGZ chr1 151431628 - PI4KB chr1 151266614 - Exonic hg19 STAD TCGA-BR-8361-01A 4 18 5'UTR-CDS Intra-chr q21.3 q21.3 Seq+ 48719 ChimerSeq STARFusion TCGA_RNA-Seq PLXNA3-ATP6AP1 PLXNA3 chrX 153699981 + ATP6AP1 chrX 153659866 + Exonic hg19 STAD TCGA-BR-8361-01A 6 9 Out-of-frame Intra-chr q28 q28 Seq+ 48720 ChimerSeq STARFusion TCGA_RNA-Seq URI1-ZNF536 URI1 chr19 30502143 + ZNF536 chr19 31038850 + Exonic hg19 STAD TCGA-VQ-A8PM-01A 187 32 Out-of-frame Intra-chr q12 q12 Transcription factor 48721 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L2-VMP1 NFE2L2 chr2 178129260 - VMP1 chr17 57851115 + Exonic hg19 STAD TCGA-VQ-A8PM-01A 167 10 In-Frame Inter-chr q31.2 Oncogene Transcription factor q23.1 Seq+ 48722 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-GTSF1 IGL@ chr22 23040891 + GTSF1 chr12 54855942 - Exonic hg19 STAD TCGA-VQ-A8PM-01A 98 0 Out-of-frame Inter-chr q11.22 q13.13 48723 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-GTSF1 IGL@ chr22 23101686 + GTSF1 chr12 54855941 - Exonic hg19 STAD TCGA-VQ-A8PM-01A 69 0 Out-of-frame Inter-chr q11.22 q13.13 48724 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-GTSF1 IGL@ chr22 23199220 + GTSF1 chr12 54855941 - Exonic hg19 STAD TCGA-VQ-A8PM-01A 53 0 Out-of-frame Inter-chr q11.22 q13.13 48725 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-GTSF1 IGL@ chr22 23135477 + GTSF1 chr12 54855942 - Exonic hg19 STAD TCGA-VQ-A8PM-01A 45 0 Out-of-frame Inter-chr q11.22 q13.13 48726 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L2-VMP1 NFE2L2 chr2 178128131 - VMP1 chr17 57851115 + Exonic hg19 STAD TCGA-VQ-A8PM-01A 40 10 5'UTR-CDS Inter-chr q31.2 Oncogene Transcription factor q23.1 Seq+ 48727 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-GTSF1 IGL@ chr22 23165768 + GTSF1 chr12 54855942 - Exonic hg19 STAD TCGA-VQ-A8PM-01A 31 0 Out-of-frame Inter-chr q11.22 q13.13 48728 ChimerSeq STARFusion TCGA_RNA-Seq DYRK1A-TTC3 DYRK1A chr21 38739930 + TTC3 chr21 38567976 + Exonic hg19 STAD TCGA-VQ-A8PM-01A 30 1 5'UTR-CDS Intra-chr q22.13 CMGC:DYRK q22.13 Seq+ 48729 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L2-VMP1 NFE2L2 chr2 178129260 - VMP1 chr17 57886157 + Exonic hg19 STAD TCGA-VQ-A8PM-01A 22 10 In-Frame Inter-chr q31.2 Oncogene Transcription factor q23.1 Seq+ 48730 ChimerSeq STARFusion TCGA_RNA-Seq TRAF3-WDR20 TRAF3 chr14 103338305 + WDR20 chr14 102661275 + Exonic hg19 STAD TCGA-VQ-A8PM-01A 22 9 In-Frame Intra-chr q32.32 q32.31 Seq+ 48731 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-ZC3H15 IGL@ chr22 23077549 + ZC3H15 chr2 187370723 + Exonic hg19 STAD TCGA-VQ-A8PM-01A 23 0 Out-of-frame Inter-chr q11.22 q32.1 48732 ChimerSeq STARFusion TCGA_RNA-Seq SNX9-GTF2H5 SNX9 chr6 158296208 + GTF2H5 chr6 158613009 + Exonic hg19 STAD TCGA-VQ-A8PM-01A 19 2 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 48733 ChimerSeq STARFusion TCGA_RNA-Seq SZRD1-PRDM2 SZRD1 chr1 16693803 + PRDM2 chr1 14075856 + Exonic hg19 STAD TCGA-VQ-A8PM-01A 18 1 Out-of-frame Intra-chr p36.13 p36.21 Tumor suppressor gene Transcription factor Seq+ 48734 ChimerSeq STARFusion TCGA_RNA-Seq TMC5-BCAR4 TMC5 chr16 19429414 + BCAR4 chr16 11914154 - Exonic hg19 STAD TCGA-VQ-A8PM-01A 9 3 5'UTR-3'UTR Intra-chr p12.3 p13.13 48735 ChimerSeq STARFusion TCGA_RNA-Seq SLC9A3-ZDHHC11 SLC9A3 chr5 488431 - ZDHHC11 chr5 801279 - Exonic hg19 STAD TCGA-BR-8362-01A 17 6 Out-of-frame Intra-chr p15.33 p15.33 Seq+ 48736 ChimerSeq STARFusion TCGA_RNA-Seq DTL-INTS7 DTL chr1 212220759 + INTS7 chr1 212194554 - Exonic hg19 STAD TCGA-BR-8362-01A 16 5 In-Frame Intra-chr q32.3 q32.3 Seq+ 48737 ChimerSeq STARFusion TCGA_RNA-Seq SLC9A3-ZDHHC11B SLC9A3 chr5 488431 - ZDHHC11B chr5 716980 - Exonic hg19 STAD TCGA-BR-8362-01A 11 4 Out-of-frame Intra-chr p15.33 p15.33 48738 ChimerSeq STARFusion TCGA_RNA-Seq UBE2R2-ACO1 UBE2R2 chr9 33817932 + ACO1 chr9 32440463 + Exonic hg19 STAD TCGA-FP-8631-01A 40 26 In-Frame Intra-chr p13.3 p21.1 Seq+ 48739 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPH3-SLC29A3 HNRNPH3 chr10 70099312 + SLC29A3 chr10 73121711 + Exonic hg19 STAD TCGA-FP-8631-01A 35 27 Out-of-frame Intra-chr q21.3 q22.1 Seq+ 48740 ChimerSeq STARFusion TCGA_RNA-Seq PITPNA-LLGL2 PITPNA chr17 1451590 - LLGL2 chr17 73564557 + Exonic hg19 STAD TCGA-FP-8631-01A 24 10 In-Frame Intra-chr p13.3 q25.1 Seq+ 48741 ChimerSeq STARFusion TCGA_RNA-Seq SNX9-ZDHHC14 SNX9 chr6 158318030 + ZDHHC14 chr6 158014020 + Exonic hg19 STAD TCGA-FP-8631-01A 19 11 In-Frame Intra-chr q25.3 q25.3 Seq+ 48742 ChimerSeq STARFusion TCGA_RNA-Seq DZIP1L-NME9 DZIP1L chr3 137805803 - NME9 chr3 138022485 - Exonic hg19 STAD TCGA-FP-8631-01A 16 7 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 48743 ChimerSeq STARFusion TCGA_RNA-Seq CCAR1-MCU CCAR1 chr10 70514584 + MCU chr10 74594117 + Exonic hg19 STAD TCGA-FP-8631-01A 10 27 In-Frame Intra-chr q21.3 Tumor suppressor gene q22.1 Seq+ 48744 ChimerSeq STARFusion TCGA_RNA-Seq CCAR1-MCU CCAR1 chr10 70514584 + MCU chr10 74474869 + Exonic hg19 STAD TCGA-FP-8631-01A 9 26 Out-of-frame Intra-chr q21.3 Tumor suppressor gene q22.1 Seq+ 48745 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF2-ARMC10 ZNRF2 chr7 30363353 + ARMC10 chr7 102724129 + Exonic hg19 STAD TCGA-FP-8631-01A 12 13 In-Frame Intra-chr p14.3 Tumor suppressor gene Seq+ 48746 ChimerSeq STARFusion TCGA_RNA-Seq UBE2R2-ACO1 UBE2R2 chr9 33817932 + ACO1 chr9 32448894 + Exonic hg19 STAD TCGA-FP-8631-01A 6 26 In-Frame Intra-chr p13.3 p21.1 Seq+ 48747 ChimerSeq STARFusion TCGA_RNA-Seq CCAR1-MCU CCAR1 chr10 70514584 + MCU chr10 74475612 + Exonic hg19 STAD TCGA-FP-8631-01A 4 26 Out-of-frame Intra-chr q21.3 Tumor suppressor gene q22.1 Seq+ 48748 ChimerSeq STARFusion TCGA_RNA-Seq VCL-ADK VCL chr10 75758133 + ADK chr10 76153899 + Exonic hg19 STAD TCGA-FP-8631-01A 9 2 In-Frame Intra-chr q22.2 q22.2 Seq+ 48749 ChimerSeq STARFusion TCGA_RNA-Seq CTPS1-NFYC CTPS1 chr1 41474386 + NFYC chr1 41213206 + Exonic hg19 STAD TCGA-FP-8631-01A 7 8 In-Frame Intra-chr p34.2 p34.2 Transcription factor Seq+ 48750 ChimerSeq STARFusion TCGA_RNA-Seq CCAR1-MCU CCAR1 chr10 70509442 + MCU chr10 74594117 + Exonic hg19 STAD TCGA-FP-8631-01A 2 26 Out-of-frame Intra-chr q21.3 Tumor suppressor gene q22.1 Seq+ 48751 ChimerSeq STARFusion TCGA_RNA-Seq CCAR1-MCU CCAR1 chr10 70514584 + MCU chr10 74520309 + Exonic hg19 STAD TCGA-FP-8631-01A 2 26 Out-of-frame Intra-chr q21.3 Tumor suppressor gene q22.1 Seq+ 48752 ChimerSeq STARFusion TCGA_RNA-Seq LAPTM4A-PUM2 LAPTM4A chr2 20251171 - PUM2 chr2 20527139 - Exonic hg19 STAD TCGA-FP-8631-01A 7 3 CDS-5'UTR Intra-chr p24.1 p24.1 Seq+ 48753 ChimerSeq STARFusion TCGA_RNA-Seq NFIX-VDR NFIX chr19 13136366 + VDR chr12 48272898 - Exonic hg19 STAD TCGA-FP-8631-01A 6 7 In-Frame Inter-chr p13.13 Transcription factor q13.11 Tumor suppressor gene Transcription factor Seq+ 48754 ChimerSeq STARFusion TCGA_RNA-Seq CDC27-SYT13 CDC27 chr17 45266512 - SYT13 chr11 45277442 - Exonic hg19 STAD TCGA-FP-8631-01A 4 14 In-Frame Inter-chr q21.32 p11.2 Tumor suppressor gene Seq+ 48755 ChimerSeq STARFusion TCGA_RNA-Seq EHMT1-NELFB EHMT1 chr9 140513501 + NELFB chr9 140157489 + Exonic hg19 STAD TCGA-FP-8631-01A 7 0 Out-of-frame Intra-chr q34.3 q34.3 48756 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106111130 - Exonic hg19 STAD TCGA-FP-8631-01A 7 0 Out-of-frame Inter-chr q21.2 32.33 48757 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG2 GATAD1 chr7 92076851 + IGHG2 chr14 106111130 - Exonic hg19 STAD TCGA-FP-8631-01A 7 0 Out-of-frame Inter-chr q21.2 48758 ChimerSeq STARFusion TCGA_RNA-Seq ITPR3-SYNGAP1 ITPR3 chr6 33646579 + SYNGAP1 chr6 33391254 + Exonic hg19 STAD TCGA-FP-8631-01A 5 7 Out-of-frame Intra-chr p21.31 Seq+ 48759 ChimerSeq STARFusion TCGA_RNA-Seq NFIX-VDR NFIX chr19 13136366 + VDR chr12 48276557 - Exonic hg19 STAD TCGA-FP-8631-01A 5 7 In-Frame Inter-chr p13.13 Transcription factor q13.11 Tumor suppressor gene Transcription factor Seq+ 48760 ChimerSeq STARFusion TCGA_RNA-Seq SLC9A8-PTGIS SLC9A8 chr20 48439678 + PTGIS chr20 48124601 - Exonic hg19 STAD TCGA-FP-8631-01A 6 3 Out-of-frame Intra-chr q13.13 q13.13 Seq+ 48761 ChimerSeq STARFusion TCGA_RNA-Seq MRPL3-CPNE4 MRPL3 chr3 131206524 - CPNE4 chr3 131759165 - Exonic hg19 STAD TCGA-FP-8631-01A 6 2 CDS-5'UTR Intra-chr q22.1 q22.1 48762 ChimerSeq STARFusion TCGA_RNA-Seq VPS13D-MFN2 VPS13D chr1 12395884 + MFN2 chr1 12066595 + Exonic hg19 STAD TCGA-FP-8631-01A 5 6 Out-of-frame Intra-chr p36.22 p36.22 Seq+ 48763 ChimerSeq STARFusion TCGA_RNA-Seq C7orf60-ADAMTS14 C7orf60 chr7 112579646 - ADAMTS14 chr10 72489050 + Exonic hg19 STAD TCGA-FP-8631-01A 6 1 Out-of-frame Inter-chr q22.1 Seq+ 48764 ChimerSeq STARFusion TCGA_RNA-Seq RAP1B-CSAD RAP1B chr12 69004832 + CSAD chr12 53555173 - Exonic hg19 STAD TCGA-FP-8631-01A 3 12 5'UTR-CDS Intra-chr q15 q13.13 Seq+ 48765 ChimerSeq STARFusion TCGA_RNA-Seq ITPR3-SYNGAP1 ITPR3 chr6 33646616 + SYNGAP1 chr6 33391254 + Exonic hg19 STAD TCGA-FP-8631-01A 3 7 Out-of-frame Intra-chr p21.31 Seq+ 48766 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-GAMT SBNO2 chr19 1154183 - GAMT chr19 1397498 - Exonic hg19 STAD TCGA-FP-8631-01A 4 3 In-Frame Intra-chr p13.3 p13.3 Seq+ 48767 ChimerSeq STARFusion TCGA_RNA-Seq NADK-TOM1L2 NADK chr1 1711344 - TOM1L2 chr17 17766162 - Exonic hg19 STAD TCGA-FP-8631-01A 3 6 5'UTR-CDS Inter-chr p36.33 p11.2 Tumor suppressor gene Seq+ 48768 ChimerSeq STARFusion TCGA_RNA-Seq VPS13C-HERC1 VPS13C chr15 62232846 - HERC1 chr15 63904755 - Exonic hg19 STAD TCGA-FP-8631-01A 3 5 In-Frame Intra-chr q22.2 q22.31 Seq+ 48769 ChimerSeq STARFusion TCGA_RNA-Seq TMC5-CLEC19A TMC5 chr16 19492787 + CLEC19A chr16 19309995 + Exonic hg19 STAD TCGA-FP-8631-01A 3 4 Out-of-frame Intra-chr p12.3 p12.3 48770 ChimerSeq STARFusion TCGA_RNA-Seq CTPS1-NFYC CTPS1 chr1 41471766 + NFYC chr1 41213206 + Exonic hg19 STAD TCGA-FP-8631-01A 2 6 In-Frame Intra-chr p34.2 p34.2 Transcription factor Seq+ 48771 ChimerSeq STARFusion TCGA_RNA-Seq CMTM4-TRIM40 CMTM4 chr16 66730243 - TRIM40 chr6 30113771 + Exonic hg19 STAD TCGA-R5-A805-01A 45 21 In-Frame Inter-chr q22.1 Seq+ 48772 ChimerSeq STARFusion TCGA_RNA-Seq AKAP13-MUSK AKAP13 chr15 86228104 + MUSK chr9 113509921 + Exonic hg19 STAD TCGA-R5-A805-01A 23 6 In-Frame Inter-chr q25.3 q31.3 TK:Musk Seq+ 48773 ChimerSeq STARFusion TCGA_RNA-Seq AXIN1-LUC7L AXIN1 chr16 354304 - LUC7L chr16 243014 - Exonic hg19 STAD TCGA-R5-A805-01A 19 10 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 48774 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-DPCR1 MALAT1 chr11 65266838 + DPCR1 chr6 30917819 + Exonic hg19 STAD TCGA-R5-A805-01A 4 34 Out-of-frame Inter-chr q13.1 48775 ChimerSeq STARFusion TCGA_RNA-Seq PFKP-BTBD16 PFKP chr10 3124653 + BTBD16 chr10 124034555 + Exonic hg19 STAD TCGA-R5-A805-01A 8 8 CDS-5'UTR Intra-chr p15.2 q26.13 48776 ChimerSeq STARFusion TCGA_RNA-Seq PFKP-BTBD16 PFKP chr10 3124653 + BTBD16 chr10 124030720 + Exonic hg19 STAD TCGA-R5-A805-01A 3 8 CDS-5'UTR Intra-chr p15.2 q26.13 48777 ChimerSeq STARFusion TCGA_RNA-Seq C17orf62-IGKC C17orf62 chr17 80402615 - IGKC chr2 89161432 - Exonic hg19 STAD TCGA-RD-A8N1-01A 28 0 Out-of-frame Inter-chr q25.3 p11.2 48778 ChimerSeq STARFusion TCGA_RNA-Seq C17orf62-IGKJ1 C17orf62 chr17 80402615 - IGKJ1 chr2 89161432 - Exonic hg19 STAD TCGA-RD-A8N1-01A 28 0 Out-of-frame Inter-chr q25.3 p11.2 48779 ChimerSeq STARFusion TCGA_RNA-Seq PTGDR-IGKC PTGDR chr14 52742857 + IGKC chr2 89161074 - Exonic hg19 STAD TCGA-RD-A8N1-01A 13 0 Out-of-frame Inter-chr q22.1 Tumor suppressor gene p11.2 48780 ChimerSeq STARFusion TCGA_RNA-Seq PTGDR-IGKJ2 PTGDR chr14 52742857 + IGKJ2 chr2 89161074 - Exonic hg19 STAD TCGA-RD-A8N1-01A 13 0 Out-of-frame Inter-chr q22.1 Tumor suppressor gene p11.2 48781 ChimerSeq STARFusion TCGA_RNA-Seq RAC1-EGFR RAC1 chr7 6431672 + EGFR chr7 55209979 + Exonic hg19 STAD TCGA-RD-A8N1-01A 11 4 Out-of-frame Intra-chr p22.1 Oncogene p11.2 TK:EGFR Oncogene 48782 ChimerSeq STARFusion TCGA_RNA-Seq PLIN4-TYROBP PLIN4 chr19 4504310 - TYROBP chr19 36398159 - Exonic hg19 STAD TCGA-BR-7958-01A 17 0 Out-of-frame Intra-chr p13.3 q13.12 48783 ChimerSeq STARFusion TCGA_RNA-Seq TPSAB1-PRSS27 TPSAB1 chr16 1291991 + PRSS27 chr16 2762815 - Exonic hg19 STAD TCGA-BR-7958-01A 6 0 In-Frame Intra-chr p13.3 p13.3 48784 ChimerSeq STARFusion TCGA_RNA-Seq WDR74-ACTN4 WDR74 chr11 62609175 - ACTN4 chr19 39220200 + Exonic hg19 STAD TCGA-BR-7958-01A 6 0 Out-of-frame Inter-chr q12.3 48785 ChimerSeq STARFusion TCGA_RNA-Seq KRT8-IGL@ KRT8 chr12 53342948 - IGL@ chr22 22735217 + Exonic hg19 STAD TCGA-BR-7958-01A 4 1 Out-of-frame Inter-chr q13.13 q11.22 48786 ChimerSeq STARFusion TCGA_RNA-Seq HCG4P5-IGL@ HCG4P5 chr6 29910316 - IGL@ chr22 22712352 + Exonic hg19 STAD TCGA-BR-7958-01A 3 2 Out-of-frame Inter-chr q11.22 48787 ChimerSeq STARFusion TCGA_RNA-Seq POU2F1-BTBD8 POU2F1 chr1 167190195 + BTBD8 chr1 92604907 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 3 1 Out-of-frame Intra-chr q24.2 Transcription factor p22.1 48788 ChimerSeq STARFusion TCGA_RNA-Seq C3-TIAL1 C3 chr19 6697512 - TIAL1 chr10 121356187 - Exonic hg19 STAD TCGA-HU-A4GJ-01A 3 0 Out-of-frame Inter-chr p13.3 q26.11 48789 ChimerSeq STARFusion TCGA_RNA-Seq ENO3-PGA3 ENO3 chr17 4851674 + PGA3 chr11 60970989 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 3 0 Out-of-frame Inter-chr p13.2 q12.2 48790 ChimerSeq STARFusion TCGA_RNA-Seq GCA-IFIH1 GCA chr2 163175434 + IFIH1 chr2 163175122 - Exonic hg19 STAD TCGA-HU-A4GJ-01A 3 0 Out-of-frame Intra-chr q24.2 q24.2 48791 ChimerSeq STARFusion TCGA_RNA-Seq KCMF1-PNO1 KCMF1 chr2 85198590 + PNO1 chr2 68400479 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 3 0 Out-of-frame Intra-chr p11.2 Transcription factor p14 48792 ChimerSeq STARFusion TCGA_RNA-Seq OTUD5-ARFGEF1 OTUD5 chrX 48783227 - ARFGEF1 chr8 68255479 - Exonic hg19 STAD TCGA-HU-A4GJ-01A 3 0 Out-of-frame Inter-chr p11.23 q13.2 48793 ChimerSeq STARFusion TCGA_RNA-Seq TSIX-TKT TSIX chrX 73041554 + TKT chr3 53260889 - Exonic hg19 STAD TCGA-HU-A4GJ-01A 3 0 Out-of-frame Inter-chr q13.2 p21.1 Tumor suppressor gene 48794 ChimerSeq STARFusion TCGA_RNA-Seq VWF-C9orf3 VWF chr12 6204626 - C9orf3 chr9 97848964 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 3 0 CDS-3'UTR Inter-chr p13.31 q22.32 Seq+ 48795 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD44-NFATC3 ANKRD44 chr2 198051747 - NFATC3 chr16 68200746 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 Out-of-frame Inter-chr q33.1 q22.1 Transcription factor 48796 ChimerSeq STARFusion TCGA_RNA-Seq ATF7IP-N4BP2L1 ATF7IP chr12 14599987 + N4BP2L1 chr13 32981909 - Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 Out-of-frame Inter-chr p13.1 q13.1 48797 ChimerSeq STARFusion TCGA_RNA-Seq CCND3-AREL1 CCND3 chr6 42016239 - AREL1 chr14 75159031 - Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 Out-of-frame Inter-chr p21.1 q24.3 48798 ChimerSeq STARFusion TCGA_RNA-Seq CHD6-ZCCHC7 CHD6 chr20 40246979 - ZCCHC7 chr9 37302185 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 5'UTR-CDS Inter-chr q12 p13.2 48799 ChimerSeq STARFusion TCGA_RNA-Seq CMPK1-PCNXL2 CMPK1 chr1 47799788 + PCNXL2 chr1 233137427 - Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 Out-of-frame Intra-chr p33 Oncogene 48800 ChimerSeq STARFusion TCGA_RNA-Seq CREB1-GCA CREB1 chr2 208394858 + GCA chr2 163204088 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 5'UTR-CDS Intra-chr q33.3 Oncogene Transcription factor q24.2 48801 ChimerSeq STARFusion TCGA_RNA-Seq DTL-PPP2R5A DTL chr1 212240227 + PPP2R5A chr1 212502477 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 Out-of-frame Intra-chr q32.3 q32.3 Seq+ 48802 ChimerSeq STARFusion TCGA_RNA-Seq EIF3E-FARS2 EIF3E chr8 109260842 - FARS2 chr6 5368783 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 CDS-5'UTR Inter-chr q23.1 p25.1 48803 ChimerSeq STARFusion TCGA_RNA-Seq ELOF1-CRYZL1 ELOF1 chr19 11664826 - CRYZL1 chr21 34963517 - Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 Out-of-frame Inter-chr p13.2 q22.11 48804 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2IP-NR3C1 ERBB2IP chr5 65222634 + NR3C1 chr5 142693733 - Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 5'UTR-CDS Intra-chr q31.3 Transcription factor Seq+ 48805 ChimerSeq STARFusion TCGA_RNA-Seq FUS-CUL4A FUS chr16 31196500 + CUL4A chr13 113873259 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 Out-of-frame Inter-chr p11.2 Tumor suppressor gene q34 48806 ChimerSeq STARFusion TCGA_RNA-Seq GPR124-WRN GPR124 chr8 37655052 + WRN chr8 30938383 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 In-Frame Intra-chr p12 Oncogene 48807 ChimerSeq STARFusion TCGA_RNA-Seq HSP90AA1-PHTF2 HSP90AA1 chr14 102605587 - PHTF2 chr7 77572017 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 Out-of-frame Inter-chr q32.31 Oncogene q11.23 48808 ChimerSeq STARFusion TCGA_RNA-Seq IL21R-IL4R IL21R chr16 27413939 + IL4R chr16 27351507 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 5'UTR-5'UTR Intra-chr p12.1 Oncogene p12.1 48809 ChimerSeq STARFusion TCGA_RNA-Seq KCNH8-UBAC2 KCNH8 chr3 19389457 + UBAC2 chr13 100037482 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 Out-of-frame Inter-chr p24.3 q32.3 48810 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1109-UBE2D3 KIAA1109 chr4 123075267 + UBE2D3 chr4 103731012 - Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 5'UTR-CDS Intra-chr q27 q24 48811 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1551-LRMP KIAA1551 chr12 32123290 + LRMP chr12 25232178 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 Out-of-frame Intra-chr p11.21 p12.1 Tumor suppressor gene 48812 ChimerSeq STARFusion TCGA_RNA-Seq LMBR1-SARNP LMBR1 chr7 156469080 - SARNP chr12 56197512 - Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 3'UTR-3'UTR Inter-chr q36.3 q13.2 48813 ChimerSeq STARFusion TCGA_RNA-Seq LMBRD2-CHMP1A LMBRD2 chr5 36105170 - CHMP1A chr16 89713739 - Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 Out-of-frame Inter-chr p13.2 q24.3 48814 ChimerSeq STARFusion TCGA_RNA-Seq LPP-BCL6 LPP chr3 187926106 + BCL6 chr3 187452695 - Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 5'UTR-5'UTR Intra-chr q27.3 Oncogene q27.3 Oncogene Transcription factor 48815 ChimerSeq STARFusion TCGA_RNA-Seq LTBP1-BIRC6 LTBP1 chr2 33360027 + BIRC6 chr2 32800223 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 In-Frame Intra-chr p22.3 p22.3 Seq+ 48816 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-VCL MDM2 chr12 69218431 + VCL chr10 75830428 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 Out-of-frame Inter-chr q15 Oncogene q22.2 48817 ChimerSeq STARFusion TCGA_RNA-Seq MGAT5-SP100 MGAT5 chr2 135012215 + SP100 chr2 231327150 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 In-Frame Intra-chr q21.2 q37.1 Tumor suppressor gene Transcription factor 48818 ChimerSeq STARFusion TCGA_RNA-Seq MGLL-CHCHD6 MGLL chr3 127540537 - CHCHD6 chr3 126445921 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 Out-of-frame Intra-chr q21.3 q21.3 48819 ChimerSeq STARFusion TCGA_RNA-Seq MRE11A-C11orf74 MRE11A chr11 94178976 - C11orf74 chr11 36631631 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 CDS-5'UTR Intra-chr Oncogene p12 Seq+ 48820 ChimerSeq STARFusion TCGA_RNA-Seq MROH1-FARP2 MROH1 chr8 145203615 + FARP2 chr2 242343243 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 Out-of-frame Inter-chr q24.3 q37.3 48821 ChimerSeq STARFusion TCGA_RNA-Seq MYEOV-ZADH2 MYEOV chr11 69062043 + ZADH2 chr18 72914295 - Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 5'UTR-CDS Inter-chr q13.3 q22.3 48822 ChimerSeq STARFusion TCGA_RNA-Seq NAA20-MYO1E NAA20 chr20 20003124 + MYO1E chr15 59553708 - Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 In-Frame Inter-chr p11.23 q22.2 48823 ChimerSeq STARFusion TCGA_RNA-Seq NBR2-LUC7L3 NBR2 chr17 41277787 + LUC7L3 chr17 48814321 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 5'UTR-CDS Intra-chr q21.31 q21.33 48824 ChimerSeq STARFusion TCGA_RNA-Seq NOSTRIN-SPC25 NOSTRIN chr2 169659183 + SPC25 chr2 169730193 - Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 Out-of-frame Intra-chr 48825 ChimerSeq STARFusion TCGA_RNA-Seq PHF14-LPP PHF14 chr7 11091407 + LPP chr3 188123900 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 5'UTR-5'UTR Inter-chr p21.3 q27.3 Oncogene 48826 ChimerSeq STARFusion TCGA_RNA-Seq PKM-COX5A PKM chr15 72523457 - COX5A chr15 75221573 - Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 Out-of-frame Intra-chr q23 q24.2 48827 ChimerSeq STARFusion TCGA_RNA-Seq PLSCR1-MBNL1 PLSCR1 chr3 146262254 - MBNL1 chr3 152132730 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 5'UTR-CDS Intra-chr q24 Transcription factor q25.1 48828 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R5C-RBM25 PPP2R5C chr14 102252520 + RBM25 chr14 73569900 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 Out-of-frame Intra-chr q32.31 Tumor suppressor gene q24.2 48829 ChimerSeq STARFusion TCGA_RNA-Seq PRKCH-CCDC64 PRKCH chr14 61789182 + CCDC64 chr12 120499514 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 In-Frame Inter-chr q23.1 48830 ChimerSeq STARFusion TCGA_RNA-Seq PXMP2-CCDC147 PXMP2 chr12 133277955 + CCDC147 chr10 106207456 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 In-Frame Inter-chr q24.33 48831 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-MAN2C1 RCC1 chr1 28832596 + MAN2C1 chr15 75649243 - Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 5'UTR-CDS Inter-chr p35.3 q24.2 48832 ChimerSeq STARFusion TCGA_RNA-Seq RERE-ETS1 RERE chr1 8525985 - ETS1 chr11 128360471 - Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 Out-of-frame Inter-chr p36.23 q24.3 Oncogene Transcription factor 48833 ChimerSeq STARFusion TCGA_RNA-Seq SH2D3A-VAV1 SH2D3A chr19 6759605 - VAV1 chr19 6836443 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 In-Frame Intra-chr p13.3 p13.3 Seq+ 48834 ChimerSeq STARFusion TCGA_RNA-Seq SMAD2-ZNF407 SMAD2 chr18 45456732 - ZNF407 chr18 72775106 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 5'UTR-CDS Intra-chr q21.1 Oncogene Tumor suppressor gene q22.3 Transcription factor 48835 ChimerSeq STARFusion TCGA_RNA-Seq SMG1P1-ACSF3 SMG1P1 chr16 22449058 + ACSF3 chr16 89187209 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 Out-of-frame Intra-chr q24.3 48836 ChimerSeq STARFusion TCGA_RNA-Seq SMIM20-SEL1L3 SMIM20 chr4 25863775 + SEL1L3 chr4 25819900 - Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 Out-of-frame Intra-chr p15.2 p15.2 48837 ChimerSeq STARFusion TCGA_RNA-Seq SNX29P2-DAZAP1 SNX29P2 chr16 29263042 + DAZAP1 chr19 1417499 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 5'UTR-CDS Inter-chr p11.2 p13.3 48838 ChimerSeq STARFusion TCGA_RNA-Seq SPTBN1-ALMS1 SPTBN1 chr2 54786024 + ALMS1 chr2 73746902 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 Out-of-frame Intra-chr p16.2 Tumor suppressor gene p13.1 48839 ChimerSeq STARFusion TCGA_RNA-Seq STRBP-PRKACB STRBP chr9 125890493 - PRKACB chr1 84700863 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 Out-of-frame Inter-chr q33.3 p31.1 48840 ChimerSeq STARFusion TCGA_RNA-Seq TBXAS1-SUZ12 TBXAS1 chr7 139575436 + SUZ12 chr17 30293166 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 In-Frame Inter-chr q34 q11.2 Tumor suppressor gene 48841 ChimerSeq STARFusion TCGA_RNA-Seq THRB-CIITA THRB chr3 24536624 - CIITA chr16 10989139 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 5'UTR-CDS Inter-chr p24.2 Tumor suppressor gene Transcription factor p13.13 48842 ChimerSeq STARFusion TCGA_RNA-Seq TICAM2-SH3RF2 TICAM2 chr5 114952015 - SH3RF2 chr5 145379621 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 5'UTR-CDS Intra-chr q22.3 q32 48843 ChimerSeq STARFusion TCGA_RNA-Seq TOX-STX8 TOX chr8 60031445 - STX8 chr17 9408479 - Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 Out-of-frame Inter-chr q12.1 p13.1 48844 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN5-SMARCAD1 TSPAN5 chr4 99428829 - SMARCAD1 chr4 95185858 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 In-Frame Intra-chr q23 q22.3 Seq+ 48845 ChimerSeq STARFusion TCGA_RNA-Seq UBE2G1-GABPB2 UBE2G1 chr17 4269566 - GABPB2 chr1 151060666 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 CDS-5'UTR Inter-chr p13.2 q21.3 48846 ChimerSeq STARFusion TCGA_RNA-Seq UIMC1-PAIP2 UIMC1 chr5 176402397 - PAIP2 chr5 138699448 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 CDS-5'UTR Intra-chr q35.2 Tumor suppressor gene q31.2 Tumor suppressor gene 48847 ChimerSeq STARFusion TCGA_RNA-Seq USP22-ULK2 USP22 chr17 20910209 - ULK2 chr17 19681029 - Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 Out-of-frame Intra-chr p11.2 p11.2 Other:ULK 48848 ChimerSeq STARFusion TCGA_RNA-Seq USP34-SRRM1 USP34 chr2 61505300 - SRRM1 chr1 24997877 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 In-Frame Inter-chr p15 p36.11 48849 ChimerSeq STARFusion TCGA_RNA-Seq ZNF280D-TCF12 ZNF280D chr15 56968868 - TCF12 chr15 57535670 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 2 0 In-Frame Intra-chr q21.3 Transcription factor q21.3 Oncogene Transcription factor 48850 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106209411 - Exonic hg19 STAD TCGA-CG-4437-01A 17 0 Out-of-frame Inter-chr q21.2 32.33 48851 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076851 + IGHG1 chr14 106209411 - Exonic hg19 STAD TCGA-CG-4437-01A 17 0 Out-of-frame Inter-chr q21.2 q32.33 48852 ChimerSeq STARFusion TCGA_RNA-Seq CDKL5-SUV39H1 CDKL5 chrX 18443815 + SUV39H1 chrX 48564656 + Exonic hg19 STAD TCGA-CG-4437-01A 16 0 5'UTR-CDS Intra-chr p22.13 CMGC:CDKL p11.23 Seq+ 48853 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106111130 - Exonic hg19 STAD TCGA-CG-4437-01A 13 0 Out-of-frame Inter-chr q21.2 32.33 48854 ChimerSeq STARFusion TCGA_RNA-Seq C1ORF220-RTBDN C1ORF220 chr1 178516298 + RTBDN chr19 12940811 - Exonic hg19 STAD TCGA-CG-4437-01A 11 0 Out-of-frame Inter-chr p13.13 48855 ChimerSeq STARFusion TCGA_RNA-Seq C1orf220-RTBDN C1orf220 chr1 178516298 + RTBDN chr19 12940811 - Exonic hg19 STAD TCGA-CG-4437-01A 11 0 5'UTR-5'UTR Inter-chr q25.2 p13.13 48856 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106237746 - Exonic hg19 STAD TCGA-CG-4437-01A 11 0 Out-of-frame Inter-chr q21.2 32.33 48857 ChimerSeq STARFusion TCGA_RNA-Seq TEX35-RTBDN TEX35 chr1 178516298 + RTBDN chr19 12940811 - Exonic hg19 STAD TCGA-CG-4437-01A 11 0 Out-of-frame Inter-chr q25.2 p13.13 48858 ChimerSeq STARFusion TCGA_RNA-Seq NEDD4L-ALPK2 NEDD4L chr18 56033460 + ALPK2 chr18 56191294 - Exonic hg19 STAD TCGA-VQ-A8PX-01A 183 16 In-Frame Intra-chr q21.31 Tumor suppressor gene q21.32 Seq+ 48859 ChimerSeq STARFusion TCGA_RNA-Seq CLDN18-LYZ CLDN18 chr3 137750984 + LYZ chr12 69747551 + Exonic hg19 STAD TCGA-VQ-A8PX-01A 50 6 Out-of-frame Inter-chr q22.3 q15 48860 ChimerSeq STARFusion TCGA_RNA-Seq CHD7-RAB2A CHD7 chr8 61591641 + RAB2A chr8 61533233 + Exonic hg19 STAD TCGA-VQ-A8PX-01A 29 2 5'UTR-CDS Intra-chr q12.2 q12.1 Seq+ 48861 ChimerSeq STARFusion TCGA_RNA-Seq ICMT-LINC00337 ICMT chr1 6293574 - LINC00337 chr1 6298351 + Exonic hg19 STAD TCGA-VQ-A8PX-01A 28 2 Out-of-frame Intra-chr p36.31 p36.31 48862 ChimerSeq STARFusion TCGA_RNA-Seq ARMC8-CLDN18 ARMC8 chr3 137907372 + CLDN18 chr3 137748639 + Exonic hg19 STAD TCGA-VQ-A8PX-01A 23 0 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 48863 ChimerSeq STARFusion TCGA_RNA-Seq CLDN18-LYZ CLDN18 chr3 137750957 + LYZ chr12 69747551 + Exonic hg19 STAD TCGA-VQ-A8PX-01A 8 6 Out-of-frame Inter-chr q22.3 q15 48864 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL1-IFI6 RN7SL1 chr14 50053530 + IFI6 chr1 27992763 - Exonic hg19 STAD TCGA-CD-A4MI-01A 23 14 Out-of-frame Inter-chr q21.3 p35.3 48865 ChimerSeq STARFusion TCGA_RNA-Seq TSSC1-SH3YL1 TSSC1 chr2 3217920 - SH3YL1 chr2 234272 - Exonic hg19 STAD TCGA-HU-A4GT-01A 12 4 In-Frame Intra-chr p25.3 p25.3 Seq+ 48866 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC17-UBC ZDHHC17 chr12 77158109 + UBC chr12 125398320 - Exonic hg19 STAD TCGA-HU-A4GT-01A 4 0 CDS-5'UTR Intra-chr q21.2 q24.31 Seq+ 48867 ChimerSeq STARFusion TCGA_RNA-Seq IVD-PRPSAP2 IVD chr15 40698172 + PRPSAP2 chr17 18832124 + Exonic hg19 STAD TCGA-HU-A4GT-01A 3 0 In-Frame Inter-chr q15.1 p11.2 48868 ChimerSeq STARFusion TCGA_RNA-Seq PPP1CA-BRI3 PPP1CA chr11 67165841 - BRI3 chr7 97911051 + Exonic hg19 STAD TCGA-HU-A4GT-01A 3 0 Out-of-frame Inter-chr q13.2 Tumor suppressor gene q21.3 48869 ChimerSeq STARFusion TCGA_RNA-Seq SNX32-PI3 SNX32 chr11 65623697 + PI3 chr20 43803572 + Exonic hg19 STAD TCGA-HU-A4GT-01A 3 0 Out-of-frame Inter-chr q13.1 q13.12 48870 ChimerSeq STARFusion TCGA_RNA-Seq AFMID-NFYB AFMID chr17 76187141 + NFYB chr12 104529310 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 5'UTR-5'UTR Inter-chr q25.3 q23.3 Transcription factor 48871 ChimerSeq STARFusion TCGA_RNA-Seq AGGF1-AP3B1 AGGF1 chr5 76335544 + AP3B1 chr5 77412058 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 In-Frame Intra-chr q13.3 q14.1 48872 ChimerSeq STARFusion TCGA_RNA-Seq ANP32E-LAMTOR5 ANP32E chr1 150195512 - LAMTOR5 chr1 110950316 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 Out-of-frame Intra-chr q21.2 p13.3 48873 ChimerSeq STARFusion TCGA_RNA-Seq BCDIN3D-TMBIM6 BCDIN3D chr12 50236637 - TMBIM6 chr12 50146247 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 In-Frame Intra-chr q13.12 q13.12 48874 ChimerSeq STARFusion TCGA_RNA-Seq BRI3BP-UBB BRI3BP chr12 125478549 + UBB chr17 16285216 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 CDS-5'UTR Inter-chr q24.31 p11.2 48875 ChimerSeq STARFusion TCGA_RNA-Seq C1orf132-NVL C1orf132 chr1 207990584 - NVL chr1 224455835 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 Out-of-frame Intra-chr q32.2 q42.11 48876 ChimerSeq STARFusion TCGA_RNA-Seq CCBL2-ZBTB1 CCBL2 chr1 89458268 - ZBTB1 chr14 64988205 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 5'UTR-5'UTR Inter-chr q23.3 Transcription factor 48877 ChimerSeq STARFusion TCGA_RNA-Seq CERS6-ZC3H15 CERS6 chr2 169487552 + ZC3H15 chr2 187359960 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 In-Frame Intra-chr q24.3 q32.1 48878 ChimerSeq STARFusion TCGA_RNA-Seq COX5A-FAM72A COX5A chr15 75215989 - FAM72A chr1 206153957 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 3'UTR-CDS Inter-chr q24.2 q32.1 48879 ChimerSeq STARFusion TCGA_RNA-Seq CROCCP2-PTTG1 CROCCP2 chr1 16971141 - PTTG1 chr5 159849309 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 5'UTR-5'UTR Inter-chr p36.13 q33.3 48880 ChimerSeq STARFusion TCGA_RNA-Seq DFNB31-SPRY2 DFNB31 chr9 117228547 - SPRY2 chr13 80911891 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 5'UTR-5'UTR Inter-chr q31.1 Tumor suppressor gene 48881 ChimerSeq STARFusion TCGA_RNA-Seq DKC1-PDIA4 DKC1 chrX 153991256 + PDIA4 chr7 148718239 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 In-Frame Inter-chr q28 q36.1 48882 ChimerSeq STARFusion TCGA_RNA-Seq DYM-ERP44 DYM chr18 46956625 - ERP44 chr9 102769971 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 Out-of-frame Inter-chr q21.1 q31.1 48883 ChimerSeq STARFusion TCGA_RNA-Seq EIF4A2-HIF1A EIF4A2 chr3 186505373 + HIF1A chr14 62213652 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 In-Frame Inter-chr q27.3 q23.2 Oncogene Tumor suppressor gene Transcription factor 48884 ChimerSeq STARFusion TCGA_RNA-Seq ENPP7P8-TRIM68 ENPP7P8 chr11 71433354 + TRIM68 chr11 4626791 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 Out-of-frame Intra-chr q13.4 p15.4 48885 ChimerSeq STARFusion TCGA_RNA-Seq ERGIC2-CD55 ERGIC2 chr12 29519810 - CD55 chr1 207532891 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 Out-of-frame Inter-chr p11.22 q32.2 48886 ChimerSeq STARFusion TCGA_RNA-Seq EVI5-GLRX2 EVI5 chr1 93159359 - GLRX2 chr1 193070334 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 In-Frame Intra-chr p22.1 q31.2 48887 ChimerSeq STARFusion TCGA_RNA-Seq FCRL5-PHF11 FCRL5 chr1 157504404 - PHF11 chr13 50080771 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 In-Frame Inter-chr q23.1 q14.2 48888 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2B-CHTOP GATAD2B chr1 153895209 - CHTOP chr1 153614719 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 5'UTR-CDS Intra-chr Transcription factor q21.3 48889 ChimerSeq STARFusion TCGA_RNA-Seq GEN1-SETD8 GEN1 chr2 17935234 + SETD8 chr12 123879594 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 5'UTR-CDS Inter-chr p24.2 Seq+ 48890 ChimerSeq STARFusion TCGA_RNA-Seq HIPK2-TBXAS1 HIPK2 chr7 139477404 - TBXAS1 chr7 139706891 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 Out-of-frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Seq+ 48891 ChimerSeq STARFusion TCGA_RNA-Seq KCTD13-PPP1R1C KCTD13 chr16 29934511 - PPP1R1C chr2 182993701 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 CDS-3'UTR Inter-chr p11.2 q31.3 48892 ChimerSeq STARFusion TCGA_RNA-Seq LIN54-LARP4 LIN54 chr4 83852096 - LARP4 chr12 50854918 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 In-Frame Inter-chr q21.22 Transcription factor q13.12 48893 ChimerSeq STARFusion TCGA_RNA-Seq LRPPRC-ATP5C1 LRPPRC chr2 44222938 - ATP5C1 chr10 7848937 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 In-Frame Inter-chr p21 p14 Seq+ 48894 ChimerSeq STARFusion TCGA_RNA-Seq MALSU1-TOMM7 MALSU1 chr7 23340636 + TOMM7 chr7 22857667 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 Out-of-frame Intra-chr p15.3 p15.3 48895 ChimerSeq STARFusion TCGA_RNA-Seq MAT2A-GNB2L1 MAT2A chr2 85770157 + GNB2L1 chr5 180668639 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 In-Frame Inter-chr p11.2 Tumor suppressor gene Tumor suppressor gene 48896 ChimerSeq STARFusion TCGA_RNA-Seq MROH1-CTAGE5 MROH1 chr8 145218751 + CTAGE5 chr14 39746138 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 Out-of-frame Inter-chr q24.3 q21.1 48897 ChimerSeq STARFusion TCGA_RNA-Seq MTA3-CSRP1 MTA3 chr2 42836724 + CSRP1 chr1 201465432 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 CDS-5'UTR Inter-chr p21 q32.1 48898 ChimerSeq STARFusion TCGA_RNA-Seq MTMR11-PLS1 MTMR11 chr1 149907477 - PLS1 chr3 142416795 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 Out-of-frame Inter-chr q21.2 q23 48899 ChimerSeq STARFusion TCGA_RNA-Seq MTOR-AGR2 MTOR chr1 11194408 - AGR2 chr7 16832581 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 Out-of-frame Inter-chr p36.22 Oncogene p21.1 48900 ChimerSeq STARFusion TCGA_RNA-Seq NDUFA12-C12orf23 NDUFA12 chr12 95387946 - C12orf23 chr12 107360889 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 CDS-5'UTR Intra-chr q22 48901 ChimerSeq STARFusion TCGA_RNA-Seq NT5C2-RPL38 NT5C2 chr10 104934615 - RPL38 chr17 72205326 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 Out-of-frame Inter-chr q24.33 q25.1 48902 ChimerSeq STARFusion TCGA_RNA-Seq OR7E14P-HMGB1 OR7E14P chr11 17035914 + HMGB1 chr13 31037831 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 5'UTR-5'UTR Inter-chr p15.1 q12.3 48903 ChimerSeq STARFusion TCGA_RNA-Seq PACS2-RASA3 PACS2 chr14 105781374 + RASA3 chr13 114839312 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 Out-of-frame Inter-chr q32.33 48904 ChimerSeq STARFusion TCGA_RNA-Seq PHKB-OGFOD1 PHKB chr16 47623013 + OGFOD1 chr16 56492460 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 In-Frame Intra-chr q12.1 q13 48905 ChimerSeq STARFusion TCGA_RNA-Seq PRPF3-MRPS21 PRPF3 chr1 150294041 + MRPS21 chr1 150280482 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 5'UTR-CDS Intra-chr q21.2 q21.2 48906 ChimerSeq STARFusion TCGA_RNA-Seq RBMXL1-ZBTB1 RBMXL1 chr1 89458268 - ZBTB1 chr14 64988205 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 5'UTR-5'UTR Inter-chr p22.2 q23.3 Transcription factor 48907 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-CRABP2 RCC1 chr1 28834672 + CRABP2 chr1 156675338 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 5'UTR-5'UTR Intra-chr p35.3 q23.1 Seq+ 48908 ChimerSeq STARFusion TCGA_RNA-Seq RNASEH2C-TMEM198B RNASEH2C chr11 65487152 - TMEM198B chr12 56229910 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 Out-of-frame Inter-chr q13.1 q13.2 48909 ChimerSeq STARFusion TCGA_RNA-Seq RPL37-CLP1 RPL37 chr5 40832544 - CLP1 chr11 57428237 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 3'UTR-CDS Inter-chr p13.1 q12.1 48910 ChimerSeq STARFusion TCGA_RNA-Seq RPL39-UBE2K RPL39 chrX 118923871 - UBE2K chr4 39776454 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 In-Frame Inter-chr q24 p14 48911 ChimerSeq STARFusion TCGA_RNA-Seq RPS25-GAS5 RPS25 chr11 118888992 - GAS5 chr1 173834685 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 CDS-3'UTR Inter-chr q25.1 Tumor suppressor gene 48912 ChimerSeq STARFusion TCGA_RNA-Seq SEC23B-RCC2 SEC23B chr20 18492926 + RCC2 chr1 17739674 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 Out-of-frame Inter-chr p11.23 Seq+ 48913 ChimerSeq STARFusion TCGA_RNA-Seq SEPW1-TRIP13 SEPW1 chr19 48282071 + TRIP13 chr5 914580 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 Out-of-frame Inter-chr p15.33 48914 ChimerSeq STARFusion TCGA_RNA-Seq SIL1-VPS26B SIL1 chr5 138456724 - VPS26B chr11 134104791 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 In-Frame Inter-chr q31.2 q25 48915 ChimerSeq STARFusion TCGA_RNA-Seq SLIRP-RCN2 SLIRP chr14 78182222 + RCN2 chr15 77236099 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 In-Frame Inter-chr q24.3 q24.3 48916 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-CRABP2 SNHG3 chr1 28834672 + CRABP2 chr1 156675338 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 5'UTR-5'UTR Intra-chr p35.3 q23.1 48917 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-UBE2D2 SNHG3 chr1 28832596 + UBE2D2 chr5 138994171 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 5'UTR-CDS Inter-chr p35.3 q31.2 48918 ChimerSeq STARFusion TCGA_RNA-Seq SPRED1-GLCE SPRED1 chr15 38545418 + GLCE chr15 69548133 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 CDS-5'UTR Intra-chr q14 q23 48919 ChimerSeq STARFusion TCGA_RNA-Seq SREBF2-CLIP1 SREBF2 chr22 42229362 + CLIP1 chr12 122865105 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 CDS-5'UTR Inter-chr q13.2 Transcription factor q24.31 48920 ChimerSeq STARFusion TCGA_RNA-Seq STK38L-CTNND1 STK38L chr12 27397265 + CTNND1 chr11 57561482 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 5'UTR-5'UTR Inter-chr p11.23 q12.1 Tumor suppressor gene 48921 ChimerSeq STARFusion TCGA_RNA-Seq SUV420H1-PPP6R3 SUV420H1 chr11 67980605 - PPP6R3 chr11 68286969 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 5'UTR-5'UTR Intra-chr q13.2 48922 ChimerSeq STARFusion TCGA_RNA-Seq THAP6-SETD2 THAP6 chr4 76442189 + SETD2 chr3 47061330 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 In-Frame Inter-chr q21.1 Transcription factor p21.31 Oncogene Tumor suppressor gene 48923 ChimerSeq STARFusion TCGA_RNA-Seq TMLHE-CLIC2 TMLHE chrX 154842453 - CLIC2 chrX 154528458 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 5'UTR-CDS Intra-chr q28 q28 48924 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-DSCR3 TMPRSS2 chr21 42880008 - DSCR3 chr21 38612940 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 5'UTR-CDS Intra-chr q22.3 q22.13 48925 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-MLLT3 TMPRSS2 chr21 42880008 - MLLT3 chr9 20620833 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 5'UTR-CDS Inter-chr q22.3 p21.3 Seq+ 48926 ChimerSeq STARFusion TCGA_RNA-Seq TOMM22-MYH9 TOMM22 chr22 39079001 + MYH9 chr22 36710363 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 In-Frame Intra-chr q13.1 q12.3 Oncogene Tumor suppressor gene 48927 ChimerSeq STARFusion TCGA_RNA-Seq UBXN4-SVIL UBXN4 chr2 136511137 + SVIL chr10 29777685 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 In-Frame Inter-chr q21.3 p11.23 48928 ChimerSeq STARFusion TCGA_RNA-Seq USP6NL-ABI1 USP6NL chr10 11653442 - ABI1 chr10 27112234 - Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 5'UTR-CDS Intra-chr p14 p12.1 48929 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC2-SMAD6 ZCCHC2 chr18 60191596 + SMAD6 chr15 67004006 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 Out-of-frame Inter-chr q21.33 q22.31 48930 ChimerSeq STARFusion TCGA_RNA-Seq ZEB2-ARHGAP15 ZEB2 chr2 145274845 - ARHGAP15 chr2 144276835 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 In-Frame Intra-chr q22.3 Transcription factor q22.2 48931 ChimerSeq STARFusion TCGA_RNA-Seq ZNF816-SIPA1L3 ZNF816 chr19 53445794 - SIPA1L3 chr19 38609946 + Exonic hg19 STAD TCGA-HU-A4GT-01A 2 0 3'UTR-CDS Intra-chr q13.41 Transcription factor q13.13 48932 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-WIPF2 GRB7 chr17 37894386 + WIPF2 chr17 38430042 + Exonic hg19 STAD TCGA-BR-8483-01A 1277 1259 5'UTR-CDS Intra-chr q12 q21.2 Seq+ 48933 ChimerSeq STARFusion TCGA_RNA-Seq ACACA-RARA ACACA chr17 35687113 - RARA chr17 38487109 + Exonic hg19 STAD TCGA-BR-8483-01A 998 688 CDS-5'UTR Intra-chr q21.2 Oncogene Transcription factor Seq+ 48934 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-WIPF2 GRB7 chr17 37894645 + WIPF2 chr17 38430042 + Exonic hg19 STAD TCGA-BR-8483-01A 521 1258 5'UTR-CDS Intra-chr q12 q21.2 Seq+ 48935 ChimerSeq STARFusion TCGA_RNA-Seq PGAP3-TOP2A PGAP3 chr17 37844087 - TOP2A chr17 38556915 - Exonic hg19 STAD TCGA-BR-8483-01A 118 78 Out-of-frame Intra-chr q12 Oncogene q21.2 Seq+ 48936 ChimerSeq STARFusion TCGA_RNA-Seq KRT19-TNS4 KRT19 chr17 39684080 - TNS4 chr17 38645221 - Exonic hg19 STAD TCGA-BR-8483-01A 27 18 Out-of-frame Intra-chr q21.2 Tumor suppressor gene q21.2 48937 ChimerSeq STARFusion TCGA_RNA-Seq MTATP6P1-MTND2P28 MTATP6P1 chr1 569164 + MTND2P28 chr1 565023 + Exonic hg19 STAD TCGA-BR-8483-01A 3 88 Out-of-frame Intra-chr p36.33 p36.33 48938 ChimerSeq STARFusion TCGA_RNA-Seq TADA2A-NT5C3B TADA2A chr17 35830636 + NT5C3B chr17 39988729 - Exonic hg19 STAD TCGA-BR-8483-01A 10 11 Out-of-frame Intra-chr q12 q21.2 Seq+ 48939 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-KRT39 ERBB2 chr17 37856564 + KRT39 chr17 39116662 - Exonic hg19 STAD TCGA-BR-8483-01A 11 5 Out-of-frame Intra-chr q12 Oncogene 48940 ChimerSeq STARFusion TCGA_RNA-Seq CSDE1-ST7L CSDE1 chr1 115279379 - ST7L chr1 113121039 - Exonic hg19 STAD TCGA-BR-8483-01A 7 3 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 48941 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86295183 + Exonic hg19 STAD TCGA-BR-8483-01A 3 4 CDS-5'UTR Intra-chr q21.2 q21.2 48942 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-GNA12 IGL@ chr22 23101685 + GNA12 chr7 2768763 - Exonic hg19 STAD TCGA-CG-5734-01A 19 0 Out-of-frame Inter-chr q11.22 p22.2 48943 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-GNA12 IGL@ chr22 23077562 + GNA12 chr7 2768763 - Exonic hg19 STAD TCGA-CG-5734-01A 17 0 Out-of-frame Inter-chr q11.22 p22.2 48944 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-GNA12 IGL@ chr22 23135477 + GNA12 chr7 2768763 - Exonic hg19 STAD TCGA-CG-5734-01A 13 0 Out-of-frame Inter-chr q11.22 p22.2 48945 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R1B-MIEN1 PPP1R1B chr17 37792257 + MIEN1 chr17 37886014 - Exonic hg19 STAD TCGA-VQ-A91X-01A 1002 769 3'UTR-CDS Intra-chr q12 Tumor suppressor gene q12 Seq+ 48946 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R1B-MIEN1 PPP1R1B chr17 37792584 + MIEN1 chr17 37886082 - Exonic hg19 STAD TCGA-VQ-A91X-01A 939 769 Out-of-frame Intra-chr q12 Tumor suppressor gene q12 Seq+ 48947 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R1B-MIEN1 PPP1R1B chr17 37792520 + MIEN1 chr17 37886014 - Exonic hg19 STAD TCGA-VQ-A91X-01A 330 769 3'UTR-CDS Intra-chr q12 Tumor suppressor gene q12 Seq+ 48948 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R1B-MIEN1 PPP1R1B chr17 37791979 + MIEN1 chr17 37886014 - Exonic hg19 STAD TCGA-VQ-A91X-01A 312 769 In-Frame Intra-chr q12 Tumor suppressor gene q12 Seq+ 48949 ChimerSeq STARFusion TCGA_RNA-Seq TTC25-PPP1R1B TTC25 chr17 40095034 + PPP1R1B chr17 37783559 + Exonic hg19 STAD TCGA-VQ-A91X-01A 43 34 CDS-5'UTR Intra-chr q21.2 q12 Tumor suppressor gene 48950 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R1B-ACLY PPP1R1B chr17 37790339 + ACLY chr17 40058066 - Exonic hg19 STAD TCGA-VQ-A91X-01A 39 16 Out-of-frame Intra-chr q12 Tumor suppressor gene q21.2 Seq+ 48951 ChimerSeq STARFusion TCGA_RNA-Seq DR1-CCDC18 DR1 chr1 93819628 + CCDC18 chr1 93730258 + Exonic hg19 STAD TCGA-VQ-A91X-01A 32 7 In-Frame Intra-chr p22.1 Transcription factor p22.1 Seq+ 48952 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-ACLY STARD3 chr17 37818597 + ACLY chr17 40054092 - Exonic hg19 STAD TCGA-VQ-A91X-01A 16 8 In-Frame Intra-chr q12 q21.2 Seq+ 48953 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R1B-ACLY PPP1R1B chr17 37790339 + ACLY chr17 40055038 - Exonic hg19 STAD TCGA-VQ-A91X-01A 4 16 In-Frame Intra-chr q12 Tumor suppressor gene q21.2 Seq+ 48954 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-HAUS8 CEACAM5 chr19 42233234 + HAUS8 chr19 17184668 - Exonic hg19 STAD TCGA-BR-4279-01A 11 1 Out-of-frame Intra-chr q13.2 p13.11 48955 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-HAUS8 CEACAM5 chr19 42233228 + HAUS8 chr19 17184674 - Exonic hg19 STAD TCGA-BR-4279-01A 4 1 Out-of-frame Intra-chr q13.2 p13.11 48956 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-GABARAP IGH@ chr14 106208230 - GABARAP chr17 7145680 - Exonic hg19 STAD TCGA-BR-4279-01A 3 0 Out-of-frame Inter-chr 32.33 p13.1 Tumor suppressor gene 48957 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-GABARAP IGHG1 chr14 106208230 - GABARAP chr17 7145680 - Exonic hg19 STAD TCGA-BR-4279-01A 3 0 Out-of-frame Inter-chr q32.33 p13.1 Tumor suppressor gene 48958 ChimerSeq STARFusion TCGA_RNA-Seq NTN1-PRKCA NTN1 chr17 9086286 + PRKCA chr17 64492319 + Exonic hg19 STAD TCGA-BR-4279-01A 2 0 In-Frame Intra-chr p13.1 q24.2 48959 ChimerSeq STARFusion TCGA_RNA-Seq WDFY1-AP1S3 WDFY1 chr2 224809865 - AP1S3 chr2 224642586 - Exonic hg19 STAD TCGA-HJ-7597-01A 14 2 Out-of-frame Intra-chr q36.1 q36.1 48960 ChimerSeq STARFusion TCGA_RNA-Seq TCF3-DNAJC11 TCF3 chr19 1619779 - DNAJC11 chr1 6714099 - Exonic hg19 STAD TCGA-BR-7197-01A 243 78 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p36.31 Tumor suppressor gene Seq+ 48961 ChimerSeq STARFusion TCGA_RNA-Seq PUM2-SDC1 PUM2 chr2 20550358 - SDC1 chr2 20405185 - Exonic hg19 STAD TCGA-BR-7197-01A 124 77 5'UTR-CDS Intra-chr p24.1 p24.1 48962 ChimerSeq STARFusion TCGA_RNA-Seq PUM2-SDC1 PUM2 chr2 20550571 - SDC1 chr2 20405185 - Exonic hg19 STAD TCGA-BR-7197-01A 45 76 5'UTR-CDS Intra-chr p24.1 p24.1 48963 ChimerSeq STARFusion TCGA_RNA-Seq KRT19-IKZF3 KRT19 chr17 39684080 - IKZF3 chr17 37944627 - Exonic hg19 STAD TCGA-BR-7197-01A 27 16 Out-of-frame Intra-chr q21.2 Tumor suppressor gene q21.1 Tumor suppressor gene Transcription factor Seq+ 48964 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND2B-CYP27A1 ZFAND2B chr2 220071764 + CYP27A1 chr2 219674300 + Exonic hg19 STAD TCGA-BR-7197-01A 17 10 Out-of-frame Intra-chr q35 q35 Seq+ 48965 ChimerSeq STARFusion TCGA_RNA-Seq EDEM2-PEX14 EDEM2 chr20 33859808 - PEX14 chr1 10659295 + Exonic hg19 STAD TCGA-BR-7197-01A 17 5 5'UTR-CDS Inter-chr q11.22 p36.22 Seq+ 48966 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND2B-CYP27A1 ZFAND2B chr2 220071764 + CYP27A1 chr2 219674346 + Exonic hg19 STAD TCGA-BR-7197-01A 7 10 Out-of-frame Intra-chr q35 q35 Seq+ 48967 ChimerSeq STARFusion TCGA_RNA-Seq OLFM2-PSENEN OLFM2 chr19 10046980 - PSENEN chr19 36236736 + Exonic hg19 STAD TCGA-BR-7197-01A 7 9 CDS-5'UTR Intra-chr p13.2 q13.12 Seq+ 48968 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND2B-CYP27A1 ZFAND2B chr2 220071764 + CYP27A1 chr2 219676945 + Exonic hg19 STAD TCGA-BR-7197-01A 3 10 Out-of-frame Intra-chr q35 q35 Seq+ 48969 ChimerSeq STARFusion TCGA_RNA-Seq OLFM2-PSENEN OLFM2 chr19 10046980 - PSENEN chr19 36236774 + Exonic hg19 STAD TCGA-BR-7197-01A 2 9 CDS-5'UTR Intra-chr p13.2 q13.12 Seq+ 48970 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA5-AEBP2 PLEKHA5 chr12 19440490 + AEBP2 chr12 19646734 + Exonic hg19 STAD TCGA-VQ-A8P5-01A 18 5 In-Frame Intra-chr p12.3 p12.3 Transcription factor Seq+ 48971 ChimerSeq STARFusion TCGA_RNA-Seq EHMT2-CRB1 EHMT2 chr6 31854358 - CRB1 chr1 197297552 + Exonic hg19 STAD TCGA-VQ-A8P5-01A 17 3 Out-of-frame Inter-chr q31.3 Seq+ 48972 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076852 + IGH@ chr14 106209410 - Exonic hg19 STAD TCGA-VQ-A8P5-01A 13 0 Out-of-frame Inter-chr q21.2 32.33 48973 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076852 + IGHG1 chr14 106209410 - Exonic hg19 STAD TCGA-VQ-A8P5-01A 13 0 Out-of-frame Inter-chr q21.2 q32.33 48974 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA5-AEBP2 PLEKHA5 chr12 19436679 + AEBP2 chr12 19646734 + Exonic hg19 STAD TCGA-VQ-A8P5-01A 8 5 In-Frame Intra-chr p12.3 p12.3 Transcription factor Seq+ 48975 ChimerSeq STARFusion TCGA_RNA-Seq SEPT11-FAM198B SEPT11 chr4 77917692 + FAM198B chr4 159052164 - Exonic hg19 STAD TCGA-BR-7715-01A 50 1 Out-of-frame Intra-chr q21.1 q32.1 Seq+ 48976 ChimerSeq STARFusion TCGA_RNA-Seq NAA15-MGST2 NAA15 chr4 140222985 + MGST2 chr4 140661366 + Exonic hg19 STAD TCGA-BR-7715-01A 46 0 CDS-3'UTR Intra-chr q31.1 q31.1 Seq+ 48977 ChimerSeq STARFusion TCGA_RNA-Seq PIN4-HDAC8 PIN4 chrX 71416754 + HDAC8 chrX 71571688 - Exonic hg19 STAD TCGA-BR-7715-01A 18 1 In-Frame Intra-chr q13.1 q13.1 Seq+ 48978 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF4-TPX2 TM9SF4 chr20 30697558 + TPX2 chr20 30345210 + Exonic hg19 STAD TCGA-BR-7715-01A 14 0 CDS-5'UTR Intra-chr q11.21 q11.21 Seq+ 48979 ChimerSeq STARFusion TCGA_RNA-Seq RAD21-EIF3H RAD21 chr8 117878825 - EIF3H chr8 117738411 - Exonic hg19 STAD TCGA-BR-7715-01A 9 1 In-Frame Intra-chr q24.11 q24.11 Seq+ 48980 ChimerSeq STARFusion TCGA_RNA-Seq FUBP1-USP33 FUBP1 chr1 78428455 - USP33 chr1 78167156 - Exonic hg19 STAD TCGA-VQ-A94O-01A 311 31 In-Frame Intra-chr p31.1 Oncogene p31.1 Tumor suppressor gene Seq+ 48981 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-RSBN1L PTPN12 chr7 77166962 + RSBN1L chr7 77365727 + Exonic hg19 STAD TCGA-VQ-A94O-01A 106 2 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 48982 ChimerSeq STARFusion TCGA_RNA-Seq URI1-EIF3H URI1 chr19 30433571 + EIF3H chr8 117671219 - Exonic hg19 STAD TCGA-VQ-A94O-01A 41 8 Out-of-frame Inter-chr q12 q24.11 Seq+ 48983 ChimerSeq STARFusion TCGA_RNA-Seq URI1-ZNF536 URI1 chr19 30462134 + ZNF536 chr19 30843275 + Exonic hg19 STAD TCGA-VQ-A94O-01A 31 12 CDS-5'UTR Intra-chr q12 q12 Transcription factor 48984 ChimerSeq STARFusion TCGA_RNA-Seq URI1-ZNF536 URI1 chr19 30433571 + ZNF536 chr19 30843275 + Exonic hg19 STAD TCGA-VQ-A94O-01A 25 12 5'UTR-5'UTR Intra-chr q12 q12 Transcription factor 48985 ChimerSeq STARFusion TCGA_RNA-Seq COG4-AARS COG4 chr16 70530169 - AARS chr16 70311057 - Exonic hg19 STAD TCGA-VQ-A94O-01A 25 6 In-Frame Intra-chr q22.1 q22.1 Seq+ 48986 ChimerSeq STARFusion TCGA_RNA-Seq REG1A-DDX52 REG1A chr2 79350526 + DDX52 chr17 35985986 - Exonic hg19 STAD TCGA-VQ-A94O-01A 25 0 Out-of-frame Inter-chr p12 q12 48987 ChimerSeq STARFusion TCGA_RNA-Seq GPR37L1-ELF3 GPR37L1 chr1 202092721 + ELF3 chr1 201985008 + Exonic hg19 STAD TCGA-VQ-A94O-01A 23 3 CDS-3'UTR Intra-chr q32.1 q32.1 Transcription factor Seq+ 48988 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142481912 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-VQ-A94O-01A 20 0 3'UTR-CDS Inter-chr q13.41 48989 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142460418 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-VQ-A94O-01A 20 0 In-Frame Inter-chr q13.41 48990 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK6 PRSS1 chr7 142481912 + KLK6 chr19 51462572 - Exonic hg19 STAD TCGA-VQ-A94O-01A 15 0 3'UTR-CDS Inter-chr q13.41 Tumor suppressor gene 48991 ChimerSeq STARFusion TCGA_RNA-Seq EIF3H-URI1 EIF3H chr8 117738255 - URI1 chr19 30476130 + Exonic hg19 STAD TCGA-VQ-A94O-01A 12 0 Out-of-frame Inter-chr q24.11 q12 Seq+ 48992 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-SLC45A4 PTK2 chr8 142011224 - SLC45A4 chr8 142231864 - Exonic hg19 STAD TCGA-VQ-A94O-01A 11 2 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 48993 ChimerSeq STARFusion TCGA_RNA-Seq URI1-EIF3H URI1 chr19 30433571 + EIF3H chr8 117661165 - Exonic hg19 STAD TCGA-VQ-A94O-01A 6 8 Out-of-frame Inter-chr q12 q24.11 Seq+ 48994 ChimerSeq STARFusion TCGA_RNA-Seq URI1-EIF3H URI1 chr19 30433571 + EIF3H chr8 117668244 - Exonic hg19 STAD TCGA-VQ-A94O-01A 5 8 Out-of-frame Inter-chr q12 q24.11 Seq+ 48995 ChimerSeq STARFusion TCGA_RNA-Seq MED26-ZSCAN18 MED26 chr19 16738683 - ZSCAN18 chr19 58601753 - Exonic hg19 STAD TCGA-VQ-A8PQ-01A 35 10 Out-of-frame Intra-chr p13.11 q13.43 Transcription factor Seq+ 48996 ChimerSeq STARFusion TCGA_RNA-Seq FBXW8-SRI FBXW8 chr12 117349160 + SRI chr7 87846506 - Exonic hg19 STAD TCGA-VQ-A8PQ-01A 15 14 In-Frame Inter-chr q24.22 q21.12 Seq+ 48997 ChimerSeq STARFusion TCGA_RNA-Seq SRI-CEP290 SRI chr7 87848174 - CEP290 chr12 88524995 - Exonic hg19 STAD TCGA-VQ-A8PQ-01A 14 0 In-Frame Inter-chr q21.12 q21.32 48998 ChimerSeq STARFusion TCGA_RNA-Seq FUT9-FBXO21 FUT9 chr6 96464088 + FBXO21 chr12 117627167 - Exonic hg19 STAD TCGA-VQ-A8PQ-01A 10 5 5'UTR-CDS Inter-chr q16.1 q24.22 Seq+ 48999 ChimerSeq STARFusion TCGA_RNA-Seq EPS8-RERGL EPS8 chr12 15942095 - RERGL chr12 18241890 - Exonic hg19 STAD TCGA-BR-A4PF-01A 152 47 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 49000 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA5-RERGL PLEKHA5 chr12 19285384 + RERGL chr12 18241890 - Exonic hg19 STAD TCGA-BR-A4PF-01A 77 16 Out-of-frame Intra-chr p12.3 p12.3 Seq+ 49001 ChimerSeq STARFusion TCGA_RNA-Seq FAR2-NFE2 FAR2 chr12 29474857 + NFE2 chr12 54689088 - Exonic hg19 STAD TCGA-BR-A4PF-01A 39 15 CDS-5'UTR Intra-chr p11.22 q13.13 Transcription factor Seq+ 49002 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142481912 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-BR-A4PF-01A 38 0 3'UTR-CDS Inter-chr q13.41 49003 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142460418 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-BR-A4PF-01A 37 0 In-Frame Inter-chr q13.41 49004 ChimerSeq STARFusion TCGA_RNA-Seq ATP2A3-ZZEF1 ATP2A3 chr17 3867468 - ZZEF1 chr17 3999994 - Exonic hg19 STAD TCGA-BR-A4PF-01A 34 4 In-Frame Intra-chr p13.2 p13.2 Seq+ 49005 ChimerSeq STARFusion TCGA_RNA-Seq EPS8-RERGL EPS8 chr12 15865783 - RERGL chr12 18241890 - Exonic hg19 STAD TCGA-BR-A4PF-01A 18 47 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 49006 ChimerSeq STARFusion TCGA_RNA-Seq NFE2-C12orf60 NFE2 chr12 54686013 - C12orf60 chr12 15056941 + Exonic hg19 STAD TCGA-BR-A4PF-01A 25 8 Out-of-frame Intra-chr q13.13 Transcription factor p12.3 Seq+ 49007 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA5-RERGL PLEKHA5 chr12 19285384 + RERGL chr12 18296227 - Exonic hg19 STAD TCGA-BR-A4PF-01A 17 16 CDS-5'UTR Intra-chr p12.3 p12.3 Seq+ 49008 ChimerSeq STARFusion TCGA_RNA-Seq NFE2-C12orf60 NFE2 chr12 54686013 - C12orf60 chr12 15052108 + Exonic hg19 STAD TCGA-BR-A4PF-01A 12 8 Out-of-frame Intra-chr q13.13 Transcription factor p12.3 Seq+ 49009 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK6 PRSS1 chr7 142481912 + KLK6 chr19 51462572 - Exonic hg19 STAD TCGA-BR-A4PF-01A 14 0 3'UTR-CDS Inter-chr q13.41 Tumor suppressor gene 49010 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA5-RERGL PLEKHA5 chr12 19285384 + RERGL chr12 18355030 - Exonic hg19 STAD TCGA-BR-A4PF-01A 8 16 CDS-5'UTR Intra-chr p12.3 p12.3 Seq+ 49011 ChimerSeq STARFusion TCGA_RNA-Seq FAR2-NFE2 FAR2 chr12 29469945 + NFE2 chr12 54689088 - Exonic hg19 STAD TCGA-BR-A4PF-01A 4 15 CDS-5'UTR Intra-chr p11.22 q13.13 Transcription factor Seq+ 49012 ChimerSeq STARFusion TCGA_RNA-Seq FIP1L1-SCFD2 FIP1L1 chr4 54266006 + SCFD2 chr4 54179930 - Exonic hg19 STAD TCGA-BR-7707-01A 14 1 In-Frame Intra-chr q12 q12 Seq+ 49013 ChimerSeq STARFusion TCGA_RNA-Seq RIPK1-SERPINB9 RIPK1 chr6 3064293 + SERPINB9 chr6 2900855 - Exonic hg19 STAD TCGA-BR-7707-01A 14 0 5'UTR-5'UTR Intra-chr p25.2 TKL:RIPK p25.2 49014 ChimerSeq STARFusion TCGA_RNA-Seq CHD6-IGH@ CHD6 chr20 40049344 - IGH@ chr14 106330467 - Exonic hg19 STAD TCGA-VQ-A8E3-01A 32 0 Out-of-frame Inter-chr q12 32.33 49015 ChimerSeq STARFusion TCGA_RNA-Seq CHD6-IGHG3 CHD6 chr20 40049344 - IGHG3 chr14 106330467 - Exonic hg19 STAD TCGA-VQ-A8E3-01A 32 0 Out-of-frame Inter-chr q12 49016 ChimerSeq STARFusion TCGA_RNA-Seq CHD6-IGHJ4 CHD6 chr20 40049344 - IGHJ4 chr14 106330467 - Exonic hg19 STAD TCGA-VQ-A8E3-01A 32 0 Out-of-frame Inter-chr q12 49017 ChimerSeq STARFusion TCGA_RNA-Seq RIPK1-SERPINB9 RIPK1 chr6 3064269 + SERPINB9 chr6 2903462 - Exonic hg19 STAD TCGA-VQ-A8E3-01A 14 0 Out-of-frame Intra-chr p25.2 TKL:RIPK p25.2 49018 ChimerSeq STARFusion TCGA_RNA-Seq RAB6A-HIST1H2AC RAB6A chr11 73418465 - HIST1H2AC chr6 26138282 + Exonic hg19 STAD TCGA-BR-4361-01A 17 37 CDS-3'UTR Inter-chr q13.4 p22.2 Seq+ 49019 ChimerSeq STARFusion TCGA_RNA-Seq JUP-GAST JUP chr17 39927899 - GAST chr17 39871684 + Exonic hg19 STAD TCGA-CG-4466-01A 88 335 CDS-5'UTR Intra-chr q21.2 Tumor suppressor gene q21.2 49020 ChimerSeq STARFusion TCGA_RNA-Seq FKBP10-KRT40 FKBP10 chr17 39969531 + KRT40 chr17 39138715 - Exonic hg19 STAD TCGA-CG-4466-01A 15 44 In-Frame Intra-chr q21.2 Seq+ 49021 ChimerSeq STARFusion TCGA_RNA-Seq FKBP10-KRT40 FKBP10 chr17 39969531 + KRT40 chr17 39140526 - Exonic hg19 STAD TCGA-CG-4466-01A 8 44 CDS-5'UTR Intra-chr q21.2 Seq+ 49022 ChimerSeq STARFusion TCGA_RNA-Seq JUP-KRT27 JUP chr17 39942736 - KRT27 chr17 38933986 - Exonic hg19 STAD TCGA-CG-4466-01A 11 32 Out-of-frame Intra-chr q21.2 Tumor suppressor gene q21.2 49023 ChimerSeq STARFusion TCGA_RNA-Seq KAT6A-GRB7 KAT6A chr8 41905896 - GRB7 chr17 37898505 + Exonic hg19 STAD TCGA-CG-4466-01A 11 27 Out-of-frame Inter-chr p11.21 Oncogene q12 49024 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-KRT222 GRB7 chr17 37894386 + KRT222 chr17 38816459 - Exonic hg19 STAD TCGA-CG-4466-01A 9 26 5'UTR-CDS Intra-chr q12 q21.2 Seq+ 49025 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-KRT222 GRB7 chr17 37894386 + KRT222 chr17 38816459 - Exonic hg19 STAD TCGA-CG-4466-01A 9 26 5'UTR-CDS Intra-chr q12 q21.2 Seq+ 49026 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-KRT222 GRB7 chr17 37894645 + KRT222 chr17 38816459 - Exonic hg19 STAD TCGA-CG-4466-01A 6 26 5'UTR-CDS Intra-chr q12 q21.2 Seq+ 49027 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-KRT222 GRB7 chr17 37894645 + KRT222 chr17 38816459 - Exonic hg19 STAD TCGA-CG-4466-01A 6 26 5'UTR-CDS Intra-chr q12 q21.2 Seq+ 49028 ChimerSeq STARFusion TCGA_RNA-Seq TMEM99-KRT28 TMEM99 chr17 38975422 + KRT28 chr17 38955251 - Exonic hg19 STAD TCGA-CG-4466-01A 3 16 5'UTR-CDS Intra-chr q21.2 q21.2 Seq+ 49029 ChimerSeq STARFusion TCGA_RNA-Seq MGAT5-MBD5 MGAT5 chr2 135028121 + MBD5 chr2 149215772 + Exonic hg19 STAD TCGA-CG-4466-01A 3 12 CDS-5'UTR Intra-chr q21.2 q23.1 Seq+ 49030 ChimerSeq STARFusion TCGA_RNA-Seq IL27RA-RLN3 IL27RA chr19 14160126 + RLN3 chr19 14141522 + Exonic hg19 STAD TCGA-CG-4466-01A 2 6 In-Frame Intra-chr p13.12 p13.12 Seq+ 49031 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-KRT24 ERBB2 chr17 37868701 + KRT24 chr17 38858185 - Exonic hg19 STAD TCGA-CG-4466-01A 2 5 Out-of-frame Intra-chr q12 Oncogene q21.2 49032 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-HAUS8 CEACAM5 chr19 42233234 + HAUS8 chr19 17184668 - Exonic hg19 STAD TCGA-CG-4466-01A 3 0 Out-of-frame Intra-chr q13.2 p13.11 49033 ChimerSeq STARFusion TCGA_RNA-Seq CPD-IGFBP4 CPD chr17 28766095 + IGFBP4 chr17 38609237 + Exonic hg19 STAD TCGA-CG-4466-01A 2 1 In-Frame Intra-chr q11.2 Tumor suppressor gene q21.2 Tumor suppressor gene 49034 ChimerSeq STARFusion TCGA_RNA-Seq LEF1-PAPSS1 LEF1 chr4 109084724 - PAPSS1 chr4 108581228 - Exonic hg19 STAD TCGA-CG-4466-01A 2 0 In-Frame Intra-chr q25 Transcription factor q25 49035 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD12-DLGAP1 ANKRD12 chr18 9195696 + DLGAP1 chr18 4005201 - Exonic hg19 STAD TCGA-FP-8209-01A 5 3 CDS-5'UTR Intra-chr p11.22 p11.31 Seq+ 49036 ChimerSeq STARFusion TCGA_RNA-Seq COL12A1-SMTN COL12A1 chr6 75912436 - SMTN chr22 31493255 + Exonic hg19 STAD TCGA-FP-8209-01A 4 0 In-Frame Inter-chr q14.1 q12.2 49037 ChimerSeq STARFusion TCGA_RNA-Seq C3-CAPZB C3 chr19 6719229 - CAPZB chr1 19665911 - Exonic hg19 STAD TCGA-FP-8209-01A 3 0 Out-of-frame Inter-chr p13.3 p36.13 49038 ChimerSeq STARFusion TCGA_RNA-Seq CD44-TMEM43 CD44 chr11 35232876 + TMEM43 chr3 14184588 + Exonic hg19 STAD TCGA-FP-8209-01A 3 0 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene p25.1 49039 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL5P-ADCY9 RN7SL5P chr9 9442233 + ADCY9 chr16 4033924 - Exonic hg19 STAD TCGA-FP-8209-01A 3 0 Out-of-frame Inter-chr p23 p13.3 49040 ChimerSeq STARFusion TCGA_RNA-Seq ABR-CNBP ABR chr17 982570 - CNBP chr3 128890614 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 CDS-5'UTR Inter-chr p13.3 q21.3 49041 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD44-DIS3L2 ANKRD44 chr2 198175302 - DIS3L2 chr2 232952197 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 In-Frame Intra-chr q33.1 q37.1 49042 ChimerSeq STARFusion TCGA_RNA-Seq APIP-CD44 APIP chr11 34937775 - CD44 chr11 35236399 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 Out-of-frame Intra-chr p13 p13 Oncogene Tumor suppressor gene Seq+ 49043 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP12-KDM1A ARHGAP12 chr10 32106716 - KDM1A chr1 23403721 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 In-Frame Inter-chr p11.22 p36.12 49044 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP24-KDM4C ARHGAP24 chr4 86643125 + KDM4C chr9 6849507 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 Out-of-frame Inter-chr q21.23 p24.1 49045 ChimerSeq STARFusion TCGA_RNA-Seq ARPC1B-PDAP1 ARPC1B chr7 98972404 + PDAP1 chr7 98998047 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 5'UTR-CDS Intra-chr q22.1 q22.1 49046 ChimerSeq STARFusion TCGA_RNA-Seq ATP2B4-TBC1D22A ATP2B4 chr1 203596347 + TBC1D22A chr22 47569141 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 5'UTR-CDS Inter-chr q32.1 q13.31 Seq+ 49047 ChimerSeq STARFusion TCGA_RNA-Seq BIN3-PLSCR1 BIN3 chr8 22526557 - PLSCR1 chr3 146254352 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 CDS-5'UTR Inter-chr p21.3 q24 Transcription factor 49048 ChimerSeq STARFusion TCGA_RNA-Seq BRD4-STK11 BRD4 chr19 15443101 - STK11 chr19 1218416 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 5'UTR-CDS Intra-chr p13.12 Atypical:BRD p13.3 Oncogene Tumor suppressor gene 49049 ChimerSeq STARFusion TCGA_RNA-Seq BRE-PEX14 BRE chr2 28117551 + PEX14 chr1 10596270 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 Out-of-frame Inter-chr p36.22 49050 ChimerSeq STARFusion TCGA_RNA-Seq C19orf12-ZNF100 C19orf12 chr19 30206032 - ZNF100 chr19 21910791 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 5'UTR-CDS Intra-chr q12 p12 Transcription factor 49051 ChimerSeq STARFusion TCGA_RNA-Seq CCDC82-CD59 CCDC82 chr11 96123008 - CD59 chr11 33744009 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 5'UTR-5'UTR Intra-chr q21 p13 49052 ChimerSeq STARFusion TCGA_RNA-Seq CHST11-APPL2 CHST11 chr12 104995769 + APPL2 chr12 105611503 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 In-Frame Intra-chr q23.3 q23.3 49053 ChimerSeq STARFusion TCGA_RNA-Seq COBL-SND1 COBL chr7 51111080 - SND1 chr7 127631000 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 Out-of-frame Intra-chr p12.1 q32.1 49054 ChimerSeq STARFusion TCGA_RNA-Seq DHX30-CNR1 DHX30 chr3 47852201 + CNR1 chr6 88855056 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 5'UTR-5'UTR Inter-chr p21.31 q15 49055 ChimerSeq STARFusion TCGA_RNA-Seq DLG1-TBL1XR1 DLG1 chr3 197009550 - TBL1XR1 chr3 176816329 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 CDS-5'UTR Intra-chr q29 Tumor suppressor gene q26.32 49056 ChimerSeq STARFusion TCGA_RNA-Seq DOPEY2-TTC3 DOPEY2 chr21 37537169 + TTC3 chr21 38544897 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 In-Frame Intra-chr q22.12 q22.13 49057 ChimerSeq STARFusion TCGA_RNA-Seq EEA1-STAG1 EEA1 chr12 93285405 - STAG1 chr3 136240259 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 In-Frame Inter-chr q22 Transcription factor q22.3 49058 ChimerSeq STARFusion TCGA_RNA-Seq ELF1-SPG20 ELF1 chr13 41634974 - SPG20 chr13 36909969 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 5'UTR-5'UTR Intra-chr q14.11 Transcription factor q13.3 49059 ChimerSeq STARFusion TCGA_RNA-Seq ENOSF1-SLCO2B1 ENOSF1 chr18 706470 - SLCO2B1 chr11 74873700 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 In-Frame Inter-chr p11.32 q13.4 49060 ChimerSeq STARFusion TCGA_RNA-Seq FAM107B-PPP1R12A FAM107B chr10 14646239 - PPP1R12A chr12 80266718 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 CDS-5'UTR Inter-chr p13 q21.31 49061 ChimerSeq STARFusion TCGA_RNA-Seq FBXW11-RAC1 FBXW11 chr5 171433462 - RAC1 chr7 6439757 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 In-Frame Inter-chr q35.1 p22.1 Oncogene 49062 ChimerSeq STARFusion TCGA_RNA-Seq FKBP5-SNRPB2 FKBP5 chr6 35610497 - SNRPB2 chr20 16717906 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 In-Frame Inter-chr p21.31 p12.1 49063 ChimerSeq STARFusion TCGA_RNA-Seq FOXN2-PRKDC FOXN2 chr2 48541953 + PRKDC chr8 48744487 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 5'UTR-CDS Inter-chr p16.3 Transcription factor q11.21 Oncogene 49064 ChimerSeq STARFusion TCGA_RNA-Seq G2E3-MAX G2E3 chr14 31028478 + MAX chr14 65544754 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 5'UTR-CDS Intra-chr q12 q23.3 Oncogene Tumor suppressor gene Transcription factor 49065 ChimerSeq STARFusion TCGA_RNA-Seq GALNTL6-BARD1 GALNTL6 chr4 172735869 + BARD1 chr2 215634036 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 In-Frame Inter-chr q34.1 q35 Tumor suppressor gene 49066 ChimerSeq STARFusion TCGA_RNA-Seq GCNT2-UBE2J1 GCNT2 chr6 10521650 + UBE2J1 chr6 90042924 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 5'UTR-CDS Intra-chr p24.3 q15 49067 ChimerSeq STARFusion TCGA_RNA-Seq GGCT-PLEKHO2 GGCT chr7 30590252 - PLEKHO2 chr15 65140792 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 5'UTR-CDS Inter-chr p14.3 q22.31 49068 ChimerSeq STARFusion TCGA_RNA-Seq GOLM1-CIC GOLM1 chr9 88714940 - CIC chr19 42790923 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 5'UTR-CDS Inter-chr q21.33 q13.2 Oncogene Tumor suppressor gene Transcription factor 49069 ChimerSeq STARFusion TCGA_RNA-Seq GPC6-MBNL2 GPC6 chr13 93879869 + MBNL2 chr13 98009736 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 Out-of-frame Intra-chr q31.3 q32.1 Transcription factor 49070 ChimerSeq STARFusion TCGA_RNA-Seq GPHN-CAND1 GPHN chr14 66975309 + CAND1 chr12 67675690 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 Out-of-frame Inter-chr q23.3 q14.3 49071 ChimerSeq STARFusion TCGA_RNA-Seq HECW2-PALLD HECW2 chr2 197297856 - PALLD chr4 169798874 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 CDS-5'UTR Inter-chr q32.3 q32.3 49072 ChimerSeq STARFusion TCGA_RNA-Seq HIVEP2-NAP1L1 HIVEP2 chr6 143158072 - NAP1L1 chr12 76461253 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 5'UTR-CDS Inter-chr q24.2 Transcription factor q21.2 49073 ChimerSeq STARFusion TCGA_RNA-Seq HM13-FAM83D HM13 chr20 30142632 + FAM83D chr20 37580182 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 Out-of-frame Intra-chr q11.21 q11.23 49074 ChimerSeq STARFusion TCGA_RNA-Seq IL4I1-SIRT3 IL4I1 chr19 50432583 - SIRT3 chr11 233534 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 5'UTR-5'UTR Inter-chr q13.33 p15.5 Tumor suppressor gene 49075 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0232-OCIAD1 KIAA0232 chr4 6784568 + OCIAD1 chr4 48834637 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 5'UTR-5'UTR Intra-chr p16.1 p11 Seq+ 49076 ChimerSeq STARFusion TCGA_RNA-Seq KLHL26-SIPA1L3 KLHL26 chr19 18747947 + SIPA1L3 chr19 38519729 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 CDS-5'UTR Intra-chr p13.11 q13.13 49077 ChimerSeq STARFusion TCGA_RNA-Seq LAMA5-SMTN LAMA5 chr20 60891727 - SMTN chr22 31493255 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 In-Frame Inter-chr q13.33 q12.2 49078 ChimerSeq STARFusion TCGA_RNA-Seq LINC00840-CCSER2 LINC00840 chr10 44357375 + CCSER2 chr10 86273205 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 Out-of-frame Intra-chr q11.21 q23.1 49079 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K7-FILIP1 MAP3K7 chr6 91296483 - FILIP1 chr6 76024918 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 Out-of-frame Intra-chr q15 STE:STE11 Oncogene q14.1 49080 ChimerSeq STARFusion TCGA_RNA-Seq MED15-PPP3CA MED15 chr22 20909435 + PPP3CA chr4 102117273 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 In-Frame Inter-chr q11.21 q24 49081 ChimerSeq STARFusion TCGA_RNA-Seq MFAP3L-PIK3R1 MFAP3L chr4 170947385 - PIK3R1 chr5 67588087 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 5'UTR-CDS Inter-chr q33 q13.1 Oncogene 49082 ChimerSeq STARFusion TCGA_RNA-Seq MRPL33-PEX14 MRPL33 chr2 28117551 + PEX14 chr1 10596270 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 3'UTR-CDS Inter-chr p23.2 p36.22 49083 ChimerSeq STARFusion TCGA_RNA-Seq N4BP2-SKI N4BP2 chr4 40154523 + SKI chr1 2234417 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 Out-of-frame Inter-chr p14 p36.33 Transcription factor 49084 ChimerSeq STARFusion TCGA_RNA-Seq NCOA2-CHD7 NCOA2 chr8 71208979 - CHD7 chr8 61707545 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 5'UTR-CDS Intra-chr q13.3 Oncogene Transcription factor q12.2 49085 ChimerSeq STARFusion TCGA_RNA-Seq NUP62-SIRT3 NUP62 chr19 50432583 - SIRT3 chr11 233534 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 5'UTR-5'UTR Inter-chr q13.33 p15.5 Tumor suppressor gene 49086 ChimerSeq STARFusion TCGA_RNA-Seq NUPL1-TNFAIP3 NUPL1 chr13 25876018 + TNFAIP3 chr6 138195982 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 Out-of-frame Inter-chr q23.3 Oncogene Tumor suppressor gene 49087 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD1-RAB2A PCMTD1 chr8 52811490 - RAB2A chr8 61496767 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 5'UTR-CDS Intra-chr q11.23 q12.1 49088 ChimerSeq STARFusion TCGA_RNA-Seq PDS5A-SUZ12P PDS5A chr4 39978060 - SUZ12P chr17 29086509 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 Out-of-frame Inter-chr p14 49089 ChimerSeq STARFusion TCGA_RNA-Seq PHTF2-NUDCD3 PHTF2 chr7 77552095 + NUDCD3 chr7 44444182 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 In-Frame Intra-chr q11.23 p13 49090 ChimerSeq STARFusion TCGA_RNA-Seq PIGK-PRDM2 PIGK chr1 77672325 - PRDM2 chr1 14099573 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 Out-of-frame Intra-chr p31.1 p36.21 Tumor suppressor gene Transcription factor 49091 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHG1-LATS1 PLEKHG1 chr6 151055228 + LATS1 chr6 150005728 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 Out-of-frame Intra-chr q25.1 q25.1 AGC:NDR Tumor suppressor gene 49092 ChimerSeq STARFusion TCGA_RNA-Seq PTPRG-MYC PTPRG chr3 62258756 + MYC chr8 128752644 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 Out-of-frame Inter-chr p14.2 q24.21 Oncogene Transcription factor 49093 ChimerSeq STARFusion TCGA_RNA-Seq PYGB-CCNL2 PYGB chr20 25264887 + CCNL2 chr1 1323445 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 In-Frame Inter-chr p11.21 p36.33 49094 ChimerSeq STARFusion TCGA_RNA-Seq RBMS3-RBBP6 RBMS3 chr3 29323247 + RBBP6 chr16 24564834 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 In-Frame Inter-chr p24.1 Tumor suppressor gene p12.1 49095 ChimerSeq STARFusion TCGA_RNA-Seq RNF213-CCNL1 RNF213 chr17 78293112 + CCNL1 chr3 156868170 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 Out-of-frame Inter-chr q25.3 Oncogene q25.31 49096 ChimerSeq STARFusion TCGA_RNA-Seq SENP7-MBNL1 SENP7 chr3 101212717 - MBNL1 chr3 152163071 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 In-Frame Intra-chr q12.3 q25.1 49097 ChimerSeq STARFusion TCGA_RNA-Seq SERINC5-ELMO1 SERINC5 chr5 79551715 - ELMO1 chr7 36895356 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 In-Frame Inter-chr q14.1 p14.1 49098 ChimerSeq STARFusion TCGA_RNA-Seq SMAD2-MBNL1 SMAD2 chr18 45456732 - MBNL1 chr3 152132730 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 5'UTR-CDS Inter-chr q21.1 Oncogene Tumor suppressor gene q25.1 49099 ChimerSeq STARFusion TCGA_RNA-Seq SPIN1-GET4 SPIN1 chr9 91003453 + GET4 chr7 925693 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 5'UTR-CDS Inter-chr q22.1 p22.3 49100 ChimerSeq STARFusion TCGA_RNA-Seq SPIN1-SUN1 SPIN1 chr9 91003453 + SUN1 chr7 925693 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 5'UTR-3'UTR Inter-chr q22.1 p22.3 49101 ChimerSeq STARFusion TCGA_RNA-Seq STK38-SCLY STK38 chr6 36467650 - SCLY chr2 238990350 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 In-Frame Inter-chr p21.31 q37.3 49102 ChimerSeq STARFusion TCGA_RNA-Seq SUCLG2-MITF SUCLG2 chr3 67704927 - MITF chr3 69928285 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 Out-of-frame Intra-chr p14.1 p13 Oncogene Transcription factor 49103 ChimerSeq STARFusion TCGA_RNA-Seq TAF2-MRPL13 TAF2 chr8 120768246 - MRPL13 chr8 121408364 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 Out-of-frame Intra-chr q24.12 q24.12 49104 ChimerSeq STARFusion TCGA_RNA-Seq TMEM106B-H2AFV TMEM106B chr7 12254653 + H2AFV chr7 44874161 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 In-Frame Intra-chr p21.3 p13 49105 ChimerSeq STARFusion TCGA_RNA-Seq UGT8-SEC24B UGT8 chr4 115520130 + SEC24B chr4 110384057 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 5'UTR-CDS Intra-chr q26 q25 49106 ChimerSeq STARFusion TCGA_RNA-Seq UNC5CL-TTC17 UNC5CL chr6 41006901 - TTC17 chr11 43469552 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 5'UTR-CDS Inter-chr p21.1 p12 49107 ChimerSeq STARFusion TCGA_RNA-Seq USP12-GNAS USP12 chr13 27745729 - GNAS chr20 57470667 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 Out-of-frame Inter-chr q12.13 Tumor suppressor gene q13.32 Oncogene 49108 ChimerSeq STARFusion TCGA_RNA-Seq USP34-PEX13 USP34 chr2 61538675 - PEX13 chr2 61258554 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 Out-of-frame Intra-chr p15 p15 49109 ChimerSeq STARFusion TCGA_RNA-Seq YES1-PQLC1 YES1 chr18 812115 - PQLC1 chr18 77679400 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 5'UTR-CDS Intra-chr p11.32 q23 49110 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-WLS ZBTB20 chr3 114099064 - WLS chr1 68624930 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 In-Frame Inter-chr q13.31 Transcription factor p31.3 49111 ChimerSeq STARFusion TCGA_RNA-Seq ZFP36L1-SMAD6 ZFP36L1 chr14 69262792 - SMAD6 chr15 67004006 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 Out-of-frame Inter-chr q24.1 q22.31 49112 ChimerSeq STARFusion TCGA_RNA-Seq ZNF544-LRRC8A ZNF544 chr19 58741828 + LRRC8A chr9 131678375 + Exonic hg19 STAD TCGA-FP-8209-01A 2 0 5'UTR-CDS Inter-chr q13.43 Transcription factor q34.11 49113 ChimerSeq STARFusion TCGA_RNA-Seq ZNF599-REV1 ZNF599 chr19 35258221 - REV1 chr2 100081447 - Exonic hg19 STAD TCGA-FP-8209-01A 2 0 CDS-5'UTR Inter-chr q13.11 Transcription factor q11.2 49114 ChimerSeq STARFusion TCGA_RNA-Seq MED24-CSF3 MED24 chr17 38175832 - CSF3 chr17 38173664 + Exonic hg19 STAD TCGA-IN-A6RS-01A 68 32 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 49115 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142481912 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-IN-A6RS-01A 35 0 3'UTR-CDS Inter-chr q13.41 49116 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142460418 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-IN-A6RS-01A 35 0 In-Frame Inter-chr q13.41 49117 ChimerSeq STARFusion TCGA_RNA-Seq TTLL5-EIF2B2 TTLL5 chr14 76286504 + EIF2B2 chr14 75474425 + Exonic hg19 STAD TCGA-IN-A6RS-01A 24 6 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 49118 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK6 PRSS1 chr7 142460418 + KLK6 chr19 51462572 - Exonic hg19 STAD TCGA-IN-A6RS-01A 22 0 In-Frame Inter-chr q13.41 Tumor suppressor gene 49119 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK6 PRSS1 chr7 142481912 + KLK6 chr19 51462572 - Exonic hg19 STAD TCGA-IN-A6RS-01A 20 0 3'UTR-CDS Inter-chr q13.41 Tumor suppressor gene 49120 ChimerSeq STARFusion TCGA_RNA-Seq CLIP2-LIMK1 CLIP2 chr7 73704064 + LIMK1 chr7 73500078 + Exonic hg19 STAD TCGA-IN-A6RS-01A 11 1 5'UTR-CDS Intra-chr q11.23 q11.23 TKL:LISK Seq+ 49121 ChimerSeq STARFusion TCGA_RNA-Seq HCG4P5-TMSB10 HCG4P5 chr6 29910315 - TMSB10 chr2 85133168 + Exonic hg19 STAD TCGA-IN-A6RS-01A 6 6 Out-of-frame Inter-chr p11.2 49122 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP18-TMEM244 ARHGAP18 chr6 130031169 - TMEM244 chr6 130182389 - Exonic hg19 STAD TCGA-BR-4370-01A 4 15 CDS-5'UTR Intra-chr q22.33 q22.33 49123 ChimerSeq STARFusion TCGA_RNA-Seq NDC80-HIF1A NDC80 chr18 2577356 + HIF1A chr14 62211423 + Exonic hg19 STAD TCGA-BR-4370-01A 2 0 Out-of-frame Inter-chr p11.32 q23.2 Oncogene Tumor suppressor gene Transcription factor 49124 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-IKZF3 GRB7 chr17 37898986 + IKZF3 chr17 37921231 - Exonic hg19 STAD TCGA-FP-7735-01A 12 1 Out-of-frame Intra-chr q12 q21.1 Tumor suppressor gene Transcription factor Seq+ 49125 ChimerSeq STARFusion TCGA_RNA-Seq MTATP6P1-MTND2P28 MTATP6P1 chr1 569538 + MTND2P28 chr1 565027 + Exonic hg19 STAD TCGA-FP-7735-01A 3 14 Out-of-frame Intra-chr p36.33 p36.33 49126 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142481912 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-IN-A6RR-01A 21 0 3'UTR-CDS Inter-chr q13.41 49127 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142460418 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-IN-A6RR-01A 21 0 In-Frame Inter-chr q13.41 49128 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P2-KLK6 PRSS3P2 chr7 142481912 + KLK6 chr19 51462572 - Exonic hg19 STAD TCGA-IN-A6RR-01A 18 0 5'UTR-CDS Inter-chr q13.41 Tumor suppressor gene 49129 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57733388 + VMP1 chr17 57915656 + Exonic hg19 STAD TCGA-RD-A8N6-01A 95 68 Out-of-frame Intra-chr q23.1 q23.1 KB Pub Seq+ 49130 ChimerSeq STARFusion TCGA_RNA-Seq CDK6-ANKIB1 CDK6 chr7 92462405 - ANKIB1 chr7 91936673 + Exonic hg19 STAD TCGA-RD-A8N6-01A 53 25 In-Frame Intra-chr q21.2 CMGC:CDK Oncogene Tumor suppressor gene q21.2 Seq+ 49131 ChimerSeq STARFusion TCGA_RNA-Seq FGD4-CACNA1C FGD4 chr12 32552893 + CACNA1C chr12 2558142 + Exonic hg19 STAD TCGA-RD-A8N6-01A 6 8 5'UTR-CDS Intra-chr p11.21 p13.33 Seq+ 49132 ChimerSeq STARFusion TCGA_RNA-Seq RALY-CHMP4B RALY chr20 32619410 + CHMP4B chr20 32436273 + Exonic hg19 STAD TCGA-VQ-A8PH-01A 158 43 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 49133 ChimerSeq STARFusion TCGA_RNA-Seq REG1A-DDX52 REG1A chr2 79350526 + DDX52 chr17 35985986 - Exonic hg19 STAD TCGA-VQ-A8PH-01A 115 0 Out-of-frame Inter-chr p12 q12 49134 ChimerSeq STARFusion TCGA_RNA-Seq RPP14-FLNB RPP14 chr3 58296318 + FLNB chr3 58154167 + Exonic hg19 STAD TCGA-VQ-A8PH-01A 78 19 Out-of-frame Intra-chr p14.3 p14.3 Seq+ 49135 ChimerSeq STARFusion TCGA_RNA-Seq PLCG1-EYA2 PLCG1 chr20 39798909 + EYA2 chr20 45797787 + Exonic hg19 STAD TCGA-VQ-A8PH-01A 77 14 In-Frame Intra-chr q12 Oncogene q13.12 Seq+ 49136 ChimerSeq STARFusion TCGA_RNA-Seq CTNNA1-REEP2 CTNNA1 chr5 138163407 + REEP2 chr5 137776705 + Exonic hg19 STAD TCGA-VQ-A8PH-01A 29 4 Out-of-frame Intra-chr q31.2 Oncogene q31.2 Seq+ 49137 ChimerSeq STARFusion TCGA_RNA-Seq RALY-CHMP4B RALY chr20 32581937 + CHMP4B chr20 32436273 + Exonic hg19 STAD TCGA-VQ-A8PH-01A 19 43 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 49138 ChimerSeq STARFusion TCGA_RNA-Seq STAU1-MAP1LC3A STAU1 chr20 47768119 - MAP1LC3A chr20 33137709 + Exonic hg19 STAD TCGA-VQ-A8PH-01A 17 12 CDS-5'UTR Intra-chr q13.13 q11.22 Seq+ 49139 ChimerSeq STARFusion TCGA_RNA-Seq TMEM194A-OR6C4 TMEM194A chr12 57463017 - OR6C4 chr12 55944993 + Exonic hg19 STAD TCGA-VQ-A8PH-01A 18 7 CDS-5'UTR Intra-chr q13.2 49140 ChimerSeq STARFusion TCGA_RNA-Seq TMEM194A-OR6C4 TMEM194A chr12 57464457 - OR6C4 chr12 55944993 + Exonic hg19 STAD TCGA-VQ-A8PH-01A 17 7 CDS-5'UTR Intra-chr q13.2 49141 ChimerSeq STARFusion TCGA_RNA-Seq LAPTM4B-MTDH LAPTM4B chr8 98837381 + MTDH chr8 98698896 + Exonic hg19 STAD TCGA-VQ-A8PH-01A 17 1 In-Frame Intra-chr q22.1 q22.1 Seq+ 49142 ChimerSeq STARFusion TCGA_RNA-Seq SMG7-LAMC2 SMG7 chr1 183441784 + LAMC2 chr1 183177016 + Exonic hg19 STAD TCGA-VQ-A8PH-01A 15 1 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 49143 ChimerSeq STARFusion TCGA_RNA-Seq STAU1-MAP1LC3A STAU1 chr20 47768119 - MAP1LC3A chr20 33147012 + Exonic hg19 STAD TCGA-VQ-A8PH-01A 11 12 Out-of-frame Intra-chr q13.13 q11.22 Seq+ 49144 ChimerSeq STARFusion TCGA_RNA-Seq ACOX1-EXOC7 ACOX1 chr17 73951647 - EXOC7 chr17 74090662 - Exonic hg19 STAD TCGA-VQ-A8PH-01A 12 1 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 49145 ChimerSeq STARFusion TCGA_RNA-Seq G6PD-CSF2RA G6PD chrX 153774251 - CSF2RA chrY 1372816 + Exonic hg19 STAD TCGA-VQ-A8PH-01A 12 0 Out-of-frame Inter-chr q28 Oncogene p22.33 49146 ChimerSeq STARFusion TCGA_RNA-Seq TAF4-PSMA7 TAF4 chr20 60639507 - PSMA7 chr20 60716000 - Exonic hg19 STAD TCGA-VQ-A8PH-01A 8 16 Out-of-frame Intra-chr q13.33 49147 ChimerSeq STARFusion TCGA_RNA-Seq TMEM194A-OR6C4 TMEM194A chr12 57464603 - OR6C4 chr12 55944993 + Exonic hg19 STAD TCGA-VQ-A8PH-01A 10 7 CDS-5'UTR Intra-chr q13.2 49148 ChimerSeq STARFusion TCGA_RNA-Seq ACACA-TNS4 ACACA chr17 35604935 - TNS4 chr17 38637020 - Exonic hg19 STAD TCGA-VQ-A8PH-01A 11 1 Out-of-frame Intra-chr q21.2 49149 ChimerSeq STARFusion TCGA_RNA-Seq RARA-WIPF2 RARA chr17 38487648 + WIPF2 chr17 38412643 + Exonic hg19 STAD TCGA-VQ-A8PH-01A 10 5 CDS-5'UTR Intra-chr q21.2 Oncogene Transcription factor q21.2 Seq+ 49150 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 STAD TCGA-VQ-A8PH-01A 11 0 Out-of-frame Inter-chr q13.33 p21.1 49151 ChimerSeq STARFusion TCGA_RNA-Seq ADNP-SLPI ADNP chr20 49547363 - SLPI chr20 43882374 - Exonic hg19 STAD TCGA-VQ-A8PH-01A 10 2 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.12 Seq+ 49152 ChimerSeq STARFusion TCGA_RNA-Seq ADNP-SLPI ADNP chr20 49545188 - SLPI chr20 43882374 - Exonic hg19 STAD TCGA-VQ-A8PH-01A 10 2 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.12 Seq+ 49153 ChimerSeq STARFusion TCGA_RNA-Seq STAU1-MAP1LC3A STAU1 chr20 47768119 - MAP1LC3A chr20 33146542 + Exonic hg19 STAD TCGA-VQ-A8PH-01A 6 12 CDS-5'UTR Intra-chr q13.13 q11.22 Seq+ 49154 ChimerSeq STARFusion TCGA_RNA-Seq KLHL26-PGPEP1 KLHL26 chr19 18747947 + PGPEP1 chr19 18466705 + Exonic hg19 STAD TCGA-VQ-A8PH-01A 8 3 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 49155 ChimerSeq STARFusion TCGA_RNA-Seq RARA-WIPF2 RARA chr17 38474700 + WIPF2 chr17 38412643 + Exonic hg19 STAD TCGA-VQ-A8PH-01A 6 5 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor q21.2 Seq+ 49156 ChimerSeq STARFusion TCGA_RNA-Seq STAU1-MAP1LC3A STAU1 chr20 47768119 - MAP1LC3A chr20 33147151 + Exonic hg19 STAD TCGA-VQ-A8PH-01A 4 12 In-Frame Intra-chr q13.13 q11.22 Seq+ 49157 ChimerSeq STARFusion TCGA_RNA-Seq ELF3-GPR37L1 ELF3 chr1 201980427 + GPR37L1 chr1 202096869 + Exonic hg19 STAD TCGA-VQ-A8E7-01B 230 41 Out-of-frame Intra-chr q32.1 Transcription factor q32.1 Seq+ 49158 ChimerSeq STARFusion TCGA_RNA-Seq ERRFI1-NCF2 ERRFI1 chr1 8086218 - NCF2 chr1 183542427 - Exonic hg19 STAD TCGA-VQ-A8E7-01B 155 9 5'UTR-CDS Intra-chr p36.23 Tumor suppressor gene q25.3 Seq+ 49159 ChimerSeq STARFusion TCGA_RNA-Seq DTL-PPP2R5A DTL chr1 212251604 + PPP2R5A chr1 212506839 + Exonic hg19 STAD TCGA-VQ-A8E7-01B 52 6 In-Frame Intra-chr q32.3 q32.3 Seq+ 49160 ChimerSeq STARFusion TCGA_RNA-Seq C17orf96-CPD C17orf96 chr17 36828571 - CPD chr17 28781746 + Exonic hg19 STAD TCGA-VQ-A8E7-01B 12 6 Out-of-frame Intra-chr q11.2 Tumor suppressor gene 49161 ChimerSeq STARFusion TCGA_RNA-Seq CTBP2-CTNNB1 CTBP2 chr10 126799559 - CTNNB1 chr3 41265512 + Exonic hg19 STAD TCGA-D7-6822-01A 129 0 5'UTR-5'UTR Inter-chr q26.13 p22.1 Oncogene Seq+ 49162 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-KANSL1 PUM1 chr1 31532051 - KANSL1 chr17 44145033 - Exonic hg19 STAD TCGA-D7-6822-01A 91 0 In-Frame Inter-chr p35.2 Seq+ 49163 ChimerSeq STARFusion TCGA_RNA-Seq PTCH1-FANCC PTCH1 chr9 98238316 - FANCC chr9 97879672 - Exonic hg19 STAD TCGA-D7-6822-01A 60 0 In-Frame Intra-chr q22.32 Oncogene Tumor suppressor gene q22.32 Oncogene Seq+ 49164 ChimerSeq STARFusion TCGA_RNA-Seq CCNT2-MAP3K19 CCNT2 chr2 135705469 + MAP3K19 chr2 135722486 - Exonic hg19 STAD TCGA-D7-6822-01A 52 6 Out-of-frame Intra-chr q21.3 q21.3 49165 ChimerSeq STARFusion TCGA_RNA-Seq PGAP1-C2orf66 PGAP1 chr2 197777606 - C2orf66 chr2 197674072 - Exonic hg19 STAD TCGA-D7-6822-01A 42 1 Out-of-frame Intra-chr q33.1 q33.1 49166 ChimerSeq STARFusion TCGA_RNA-Seq TPM3-DENND4B TPM3 chr1 154155464 - DENND4B chr1 153910339 - Exonic hg19 STAD TCGA-D7-6822-01A 42 1 In-Frame Intra-chr q21.3 q21.3 Seq+ 49167 ChimerSeq STARFusion TCGA_RNA-Seq SKI-FAF1 SKI chr1 2161174 + FAF1 chr1 51267349 - Exonic hg19 STAD TCGA-D7-6822-01A 40 0 In-Frame Intra-chr p36.33 Transcription factor p32.3 Seq+ 49168 ChimerSeq STARFusion TCGA_RNA-Seq LATS1-KATNA1 LATS1 chr6 150038985 - KATNA1 chr6 149925918 - Exonic hg19 STAD TCGA-D7-6822-01A 37 0 5'UTR-CDS Intra-chr q25.1 AGC:NDR Tumor suppressor gene q25.1 49169 ChimerSeq STARFusion TCGA_RNA-Seq KCNQ1-CD81 KCNQ1 chr11 2466714 + CD81 chr11 2411642 + Exonic hg19 STAD TCGA-D7-6822-01A 34 1 Out-of-frame Intra-chr p15.5 p15.5 Seq+ 49170 ChimerSeq STARFusion TCGA_RNA-Seq FAF1-SKI FAF1 chr1 51425439 - SKI chr1 2234417 + Exonic hg19 STAD TCGA-D7-6822-01A 27 0 In-Frame Intra-chr p32.3 p36.33 Transcription factor Seq+ 49171 ChimerSeq STARFusion TCGA_RNA-Seq CTBP2-CTNNB1 CTBP2 chr10 126848888 - CTNNB1 chr3 41265512 + Exonic hg19 STAD TCGA-D7-6822-01A 21 0 5'UTR-5'UTR Inter-chr q26.13 p22.1 Oncogene Seq+ 49172 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-WDR70 NIPBL chr5 37061120 + WDR70 chr5 37752588 + Exonic hg19 STAD TCGA-D7-6822-01A 20 0 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 49173 ChimerSeq STARFusion TCGA_RNA-Seq ARID4B-TOMM20 ARID4B chr1 235490229 - TOMM20 chr1 235285687 - Exonic hg19 STAD TCGA-D7-6822-01A 14 0 Out-of-frame Intra-chr q42.3 q42.3 Seq+ 49174 ChimerSeq STARFusion TCGA_RNA-Seq TBX2-BCAS3 TBX2 chr17 59482060 + BCAS3 chr17 59461537 + Exonic hg19 STAD TCGA-D7-6822-01A 11 0 Out-of-frame Intra-chr q23.2 Transcription factor q23.2 49175 ChimerSeq STARFusion TCGA_RNA-Seq ERMP1-KIAA2026 ERMP1 chr9 5787061 - KIAA2026 chr9 5914062 - Exonic hg19 STAD TCGA-D7-6822-01A 10 0 Out-of-frame Intra-chr p24.1 p24.1 49176 ChimerSeq STARFusion TCGA_RNA-Seq STK3-NIPAL2 STK3 chr8 99837743 - NIPAL2 chr8 99266315 - Exonic hg19 STAD TCGA-D7-6822-01A 9 0 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 49177 ChimerSeq STARFusion TCGA_RNA-Seq FLAD1-PRUNE FLAD1 chr1 154956542 + PRUNE chr1 150999709 + Exonic hg19 STAD TCGA-D7-6822-01A 8 0 Out-of-frame Intra-chr q21.3 Seq+ 49178 ChimerSeq STARFusion TCGA_RNA-Seq NAA15-RAB33B NAA15 chr4 140291558 + RAB33B chr4 140393840 + Exonic hg19 STAD TCGA-D7-6822-01A 8 0 In-Frame Intra-chr q31.1 q31.1 49179 ChimerSeq STARFusion TCGA_RNA-Seq TMED10-MLH3 TMED10 chr14 75614367 - MLH3 chr14 75497405 - Exonic hg19 STAD TCGA-D7-6822-01A 7 0 Out-of-frame Intra-chr q24.3 q24.3 Tumor suppressor gene Seq+ 49180 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC12-COLEC11 TRAPPC12 chr2 3428434 + COLEC11 chr2 3651905 + Exonic hg19 STAD TCGA-D7-6822-01A 7 0 In-Frame Intra-chr p25.3 Seq+ 49181 ChimerSeq STARFusion TCGA_RNA-Seq IMMP1L-DCDC1 IMMP1L chr11 31531066 - DCDC1 chr11 31159331 - Exonic hg19 STAD TCGA-D7-6822-01A 5 0 5'UTR-3'UTR Intra-chr p13 p13 Seq+ 49182 ChimerSeq STARFusion TCGA_RNA-Seq LATS1-KATNA1 LATS1 chr6 150038985 - KATNA1 chr6 149924509 - Exonic hg19 STAD TCGA-D7-6822-01A 5 0 5'UTR-CDS Intra-chr q25.1 AGC:NDR Tumor suppressor gene q25.1 49183 ChimerSeq STARFusion TCGA_RNA-Seq LRBA-IGH@ LRBA chr4 151935579 - IGH@ chr14 106877926 - Exonic hg19 STAD TCGA-D7-6822-01A 5 0 Out-of-frame Inter-chr q31.3 32.33 49184 ChimerSeq STARFusion TCGA_RNA-Seq PSMD4-S100A10 PSMD4 chr1 151234777 + S100A10 chr1 151955800 - Exonic hg19 STAD TCGA-D7-6822-01A 5 0 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 49185 ChimerSeq STARFusion TCGA_RNA-Seq ACTN1-RNF41 ACTN1 chr14 69369194 - RNF41 chr12 56610397 - Exonic hg19 STAD TCGA-D7-6822-01A 4 0 5'UTR-5'UTR Inter-chr q24.1 q13.3 49186 ChimerSeq STARFusion TCGA_RNA-Seq ENTPD8-NOXA1 ENTPD8 chr9 140328904 - NOXA1 chr9 140328815 + Exonic hg19 STAD TCGA-D7-6822-01A 4 0 Out-of-frame Intra-chr q34.3 q34.3 49187 ChimerSeq STARFusion TCGA_RNA-Seq IMMP2L-ATXN7L1 IMMP2L chr7 111127294 - ATXN7L1 chr7 105305735 - Exonic hg19 STAD TCGA-D7-6822-01A 4 0 Out-of-frame Intra-chr q31.1 q22.3 49188 ChimerSeq STARFusion TCGA_RNA-Seq IREB2-WDR93 IREB2 chr15 78732223 + WDR93 chr15 90244938 + Exonic hg19 STAD TCGA-D7-6822-01A 4 0 CDS-5'UTR Intra-chr q25.1 q26.1 49189 ChimerSeq STARFusion TCGA_RNA-Seq PGAP3-ERBB2 PGAP3 chr17 37842175 - ERBB2 chr17 37844949 + Exonic hg19 STAD TCGA-D7-6822-01A 4 0 CDS-5'UTR Intra-chr q12 Oncogene q12 Oncogene Seq+ 49190 ChimerSeq STARFusion TCGA_RNA-Seq CHSY3-FBXL17 CHSY3 chr5 129244053 + FBXL17 chr5 107684231 - Exonic hg19 STAD TCGA-D7-6822-01A 3 0 In-Frame Intra-chr q23.3 q21.3 49191 ChimerSeq STARFusion TCGA_RNA-Seq EXT1-SAMD12 EXT1 chr8 119122324 - SAMD12 chr8 119209971 - Exonic hg19 STAD TCGA-D7-6822-01A 3 0 Out-of-frame Intra-chr q24.11 Oncogene Tumor suppressor gene q24.12 Seq+ 49192 ChimerSeq STARFusion TCGA_RNA-Seq IMMP1L-DCDC1 IMMP1L chr11 31491305 - DCDC1 chr11 31159331 - Exonic hg19 STAD TCGA-D7-6822-01A 3 0 Out-of-frame Intra-chr p13 p13 Seq+ 49193 ChimerSeq STARFusion TCGA_RNA-Seq IMMP1L-DCDC1 IMMP1L chr11 31491287 - DCDC1 chr11 31159331 - Exonic hg19 STAD TCGA-D7-6822-01A 3 0 Out-of-frame Intra-chr p13 p13 Seq+ 49194 ChimerSeq STARFusion TCGA_RNA-Seq KHDC1-DDX43 KHDC1 chr6 74001721 - DDX43 chr6 74123381 + Exonic hg19 STAD TCGA-D7-6822-01A 3 0 Out-of-frame Intra-chr q13 q13 49195 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1033-RFX4 KIAA1033 chr12 105527674 + RFX4 chr12 107033110 + Exonic hg19 STAD TCGA-D7-6822-01A 3 0 Out-of-frame Intra-chr q23.3 Transcription factor 49196 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1468-PIGN KIAA1468 chr18 59878475 + PIGN chr18 59813258 - Exonic hg19 STAD TCGA-D7-6822-01A 3 0 In-Frame Intra-chr q21.33 q21.33 49197 ChimerSeq STARFusion TCGA_RNA-Seq MB21D1-EIF3EP1 MB21D1 chr6 74123381 - EIF3EP1 chr6 74001721 + Exonic hg19 STAD TCGA-D7-6822-01A 3 0 Out-of-frame Intra-chr q13 q13 49198 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2NL-PSMD4 NOTCH2NL chr1 145209436 + PSMD4 chr1 151234637 + Exonic hg19 STAD TCGA-D7-6822-01A 3 0 5'UTR-CDS Intra-chr q21.1 q21.3 49199 ChimerSeq STARFusion TCGA_RNA-Seq RNF213-TBCD RNF213 chr17 78319369 + TBCD chr17 80714041 + Exonic hg19 STAD TCGA-D7-6822-01A 3 0 Out-of-frame Intra-chr q25.3 Oncogene Seq+ 49200 ChimerSeq STARFusion TCGA_RNA-Seq SF3B1-ACTN1 SF3B1 chr2 198283233 - ACTN1 chr14 69347629 - Exonic hg19 STAD TCGA-D7-6822-01A 3 0 In-Frame Inter-chr q33.1 Oncogene q24.1 49201 ChimerSeq STARFusion TCGA_RNA-Seq TMED10-MLH3 TMED10 chr14 75614367 - MLH3 chr14 75497418 - Exonic hg19 STAD TCGA-D7-6822-01A 3 0 Out-of-frame Intra-chr q24.3 q24.3 Tumor suppressor gene Seq+ 49202 ChimerSeq STARFusion TCGA_RNA-Seq AP1B1-HM13 AP1B1 chr22 29784413 - HM13 chr20 30125982 + Exonic hg19 STAD TCGA-D7-6822-01A 2 0 5'UTR-CDS Inter-chr q12.2 q11.21 49203 ChimerSeq STARFusion TCGA_RNA-Seq BRF1-NUDT14 BRF1 chr14 105752633 - NUDT14 chr14 105644072 - Exonic hg19 STAD TCGA-D7-6822-01A 2 0 Out-of-frame Intra-chr q32.33 Tumor suppressor gene q32.33 Seq+ 49204 ChimerSeq STARFusion TCGA_RNA-Seq BSG-AP3D1 BSG chr19 572701 + AP3D1 chr19 2129456 - Exonic hg19 STAD TCGA-D7-6822-01A 2 0 In-Frame Intra-chr p13.3 p13.3 49205 ChimerSeq STARFusion TCGA_RNA-Seq CD164-REPS1 CD164 chr6 109699103 - REPS1 chr6 139266834 - Exonic hg19 STAD TCGA-D7-6822-01A 2 0 In-Frame Intra-chr q21 q24.1 49206 ChimerSeq STARFusion TCGA_RNA-Seq FAM193A-MAEA FAM193A chr4 2717831 + MAEA chr4 1326545 + Exonic hg19 STAD TCGA-D7-6822-01A 2 0 In-Frame Intra-chr p16.3 p16.3 49207 ChimerSeq STARFusion TCGA_RNA-Seq FRMD8-DDX39B FRMD8 chr11 65172539 + DDX39B chr6 31503262 - Exonic hg19 STAD TCGA-D7-6822-01A 2 0 In-Frame Inter-chr q13.1 49208 ChimerSeq STARFusion TCGA_RNA-Seq FUT9-MANEA FUT9 chr6 96562003 + MANEA chr6 96034278 + Exonic hg19 STAD TCGA-D7-6822-01A 2 0 5'UTR-5'UTR Intra-chr q16.1 q16.1 49209 ChimerSeq STARFusion TCGA_RNA-Seq GATS-PILRB GATS chr7 99820220 - PILRB chr7 99952766 + Exonic hg19 STAD TCGA-D7-6822-01A 2 0 3'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 49210 ChimerSeq STARFusion TCGA_RNA-Seq HMOX1-TOM1 HMOX1 chr22 35785956 + TOM1 chr22 35726340 + Exonic hg19 STAD TCGA-D7-6822-01A 2 0 Out-of-frame Intra-chr q12.3 q12.3 49211 ChimerSeq STARFusion TCGA_RNA-Seq IMMP1L-DCDC1 IMMP1L chr11 31531066 - DCDC1 chr11 31131908 - Exonic hg19 STAD TCGA-D7-6822-01A 2 0 5'UTR-3'UTR Intra-chr p13 p13 Seq+ 49212 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0040-NBPF14 KIAA0040 chr1 175161776 - NBPF14 chr1 148017665 - Exonic hg19 STAD TCGA-D7-6822-01A 2 0 5'UTR-CDS Intra-chr q25.1 q21.2 49213 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-FAM156B MATR3 chr5 138629494 + FAM156B chrX 52928085 + Exonic hg19 STAD TCGA-D7-6822-01A 2 0 5'UTR-3'UTR Inter-chr q31.2 p11.22 49214 ChimerSeq STARFusion TCGA_RNA-Seq MPHOSPH9-ACADM MPHOSPH9 chr12 123714808 - ACADM chr1 76253182 + Exonic hg19 STAD TCGA-D7-6822-01A 2 0 Out-of-frame Inter-chr q24.31 p31.1 49215 ChimerSeq STARFusion TCGA_RNA-Seq MPHOSPH9-RABGGTB MPHOSPH9 chr12 123714808 - RABGGTB chr1 76253182 + Exonic hg19 STAD TCGA-D7-6822-01A 2 0 5'UTR-CDS Inter-chr q24.31 p31.1 49216 ChimerSeq STARFusion TCGA_RNA-Seq MTIF2-SMEK2 MTIF2 chr2 55489452 - SMEK2 chr2 55842642 - Exonic hg19 STAD TCGA-D7-6822-01A 2 0 In-Frame Intra-chr p16.1 49217 ChimerSeq STARFusion TCGA_RNA-Seq NKD1-AMACR NKD1 chr16 50583466 + AMACR chr5 34006004 - Exonic hg19 STAD TCGA-D7-6822-01A 2 0 Out-of-frame Inter-chr q12.1 p13.2 49218 ChimerSeq STARFusion TCGA_RNA-Seq PRKCA-ATL2 PRKCA chr17 64302245 + ATL2 chr2 38570654 - Exonic hg19 STAD TCGA-D7-6822-01A 2 0 In-Frame Inter-chr q24.2 p22.1 49219 ChimerSeq STARFusion TCGA_RNA-Seq SEC16B-IL6ST SEC16B chr1 177953341 - IL6ST chr5 55278639 - Exonic hg19 STAD TCGA-D7-6822-01A 2 0 5'UTR-5'UTR Inter-chr q25.2 q11.2 Oncogene 49220 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L1-MAX SIPA1L1 chr14 71787898 + MAX chr14 65544754 - Exonic hg19 STAD TCGA-D7-6822-01A 2 0 5'UTR-CDS Intra-chr q24.2 q23.3 Oncogene Tumor suppressor gene Transcription factor 49221 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L3-LRRC8D SIPA1L3 chr19 38423332 + LRRC8D chr1 90309197 + Exonic hg19 STAD TCGA-D7-6822-01A 2 0 5'UTR-5'UTR Inter-chr q13.13 p22.2 49222 ChimerSeq STARFusion TCGA_RNA-Seq SLC19A1-C9orf3 SLC19A1 chr21 46945731 - C9orf3 chr9 97848964 + Exonic hg19 STAD TCGA-D7-6822-01A 2 0 CDS-3'UTR Inter-chr q22.3 q22.32 49223 ChimerSeq STARFusion TCGA_RNA-Seq SLC19A1-KBTBD2 SLC19A1 chr21 46945731 - KBTBD2 chr7 32919554 - Exonic hg19 STAD TCGA-D7-6822-01A 2 0 CDS-5'UTR Inter-chr q22.3 p14.3 49224 ChimerSeq STARFusion TCGA_RNA-Seq SORD-IKZF3 SORD chr15 45335619 + IKZF3 chr17 37949186 - Exonic hg19 STAD TCGA-D7-6822-01A 2 0 In-Frame Inter-chr q21.1 q21.1 Tumor suppressor gene Transcription factor Seq+ 49225 ChimerSeq STARFusion TCGA_RNA-Seq TOPORS-HEATR5A TOPORS chr9 32550772 - HEATR5A chr14 31833504 - Exonic hg19 STAD TCGA-D7-6822-01A 2 0 Out-of-frame Inter-chr p21.1 Tumor suppressor gene Transcription factor q12 49226 ChimerSeq STARFusion TCGA_RNA-Seq VPS45-PRPF3 VPS45 chr1 150082742 + PRPF3 chr1 150297353 + Exonic hg19 STAD TCGA-D7-6822-01A 2 0 CDS-5'UTR Intra-chr q21.2 q21.2 49227 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-GABRA3 ZFAND3 chr6 37897775 + GABRA3 chrX 151533068 - Exonic hg19 STAD TCGA-D7-6822-01A 2 0 CDS-5'UTR Inter-chr p21.2 q28 49228 ChimerSeq STARFusion TCGA_RNA-Seq ZNF189-C22orf46 ZNF189 chr9 104162292 + C22orf46 chr22 42089467 + Exonic hg19 STAD TCGA-D7-6822-01A 2 0 Out-of-frame Inter-chr q31.1 Transcription factor q13.2 49229 ChimerSeq STARFusion TCGA_RNA-Seq GRK6-DBN1 GRK6 chr5 176862122 + DBN1 chr5 176886269 - Exonic hg19 STAD TCGA-CD-A4MH-01A 105 32 In-Frame Intra-chr q35.3 q35.3 Seq+ 49230 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L3-EIF3B SIPA1L3 chr19 38519796 + EIF3B chr7 2411412 + Exonic hg19 STAD TCGA-CD-A4MH-01A 74 31 5'UTR-CDS Inter-chr q13.13 p22.3 Seq+ 49231 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 125020111 - SCARB1 chr12 125302253 - Exonic hg19 STAD TCGA-CD-A4MH-01A 71 33 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 49232 ChimerSeq STARFusion TCGA_RNA-Seq ABR-TMCO1 ABR chr17 1132087 - TMCO1 chr1 165723511 - Exonic hg19 STAD TCGA-CD-A4MH-01A 56 18 5'UTR-CDS Inter-chr p13.3 q24.1 49233 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L3-EIF3B SIPA1L3 chr19 38519796 + EIF3B chr7 2412308 + Exonic hg19 STAD TCGA-CD-A4MH-01A 26 31 5'UTR-CDS Inter-chr q13.13 p22.3 Seq+ 49234 ChimerSeq STARFusion TCGA_RNA-Seq LUZP1-CLPB LUZP1 chr1 23495259 - CLPB chr11 72028264 - Exonic hg19 STAD TCGA-CD-A4MH-01A 31 6 5'UTR-CDS Inter-chr p36.12 q13.4 Seq+ 49235 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 125051854 - SCARB1 chr12 125302253 - Exonic hg19 STAD TCGA-CD-A4MH-01A 14 33 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 49236 ChimerSeq STARFusion TCGA_RNA-Seq HSD17B4-TNFAIP8 HSD17B4 chr5 118850741 + TNFAIP8 chr5 118728511 + Exonic hg19 STAD TCGA-CD-A4MH-01A 21 4 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 49237 ChimerSeq STARFusion TCGA_RNA-Seq RHPN2-PEPD RHPN2 chr19 33481420 - PEPD chr19 33984243 - Exonic hg19 STAD TCGA-CD-A4MH-01A 18 14 In-Frame Intra-chr q13.11 q13.11 Seq+ 49238 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-PHF20 EPB41L1 chr20 34700402 + PHF20 chr20 34487292 + Exonic hg19 STAD TCGA-CD-A4MH-01A 17 6 5'UTR-CDS Intra-chr q11.23 q11.22 Transcription factor Seq+ 49239 ChimerSeq STARFusion TCGA_RNA-Seq CNOT10-CACNA2D4 CNOT10 chr3 32778982 + CACNA2D4 chr12 1955855 - Exonic hg19 STAD TCGA-CD-A4MH-01A 15 1 In-Frame Inter-chr p22.3 p13.33 Seq+ 49240 ChimerSeq STARFusion TCGA_RNA-Seq UQCC1-ERGIC3 UQCC1 chr20 33981895 - ERGIC3 chr20 34130072 + Exonic hg19 STAD TCGA-CD-A4MH-01A 11 4 Out-of-frame Intra-chr q11.22 q11.22 49241 ChimerSeq STARFusion TCGA_RNA-Seq PANK2-ATRN PANK2 chr20 3899443 + ATRN chr20 3596475 + Exonic hg19 STAD TCGA-CD-A4MH-01A 10 3 In-Frame Intra-chr p13 p13 49242 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-PHF20 EPB41L1 chr20 34713449 + PHF20 chr20 34487292 + Exonic hg19 STAD TCGA-CD-A4MH-01A 9 6 Out-of-frame Intra-chr q11.23 q11.22 Transcription factor Seq+ 49243 ChimerSeq STARFusion TCGA_RNA-Seq NPLOC4-DNAH17 NPLOC4 chr17 79580344 - DNAH17 chr17 76528818 - Exonic hg19 STAD TCGA-CD-A4MH-01A 10 2 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 49244 ChimerSeq STARFusion TCGA_RNA-Seq KDM2B-RHOF KDM2B chr12 121932382 - RHOF chr12 122217568 - Exonic hg19 STAD TCGA-CD-A4MH-01A 10 1 In-Frame Intra-chr q24.31 Transcription factor q24.31 Seq+ 49245 ChimerSeq STARFusion TCGA_RNA-Seq POC1A-PBRM1 POC1A chr3 52172185 - PBRM1 chr3 52661386 - Exonic hg19 STAD TCGA-CD-A4MH-01A 8 1 In-Frame Intra-chr p21.2 p21.1 Oncogene Tumor suppressor gene 49246 ChimerSeq STARFusion TCGA_RNA-Seq ROR1-CA10 ROR1 chr1 64240179 + CA10 chr17 49825178 - Exonic hg19 STAD TCGA-CD-A4MH-01A 7 3 Out-of-frame Inter-chr p31.3 TK:Ror q22 49247 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-PHF20 EPB41L1 chr20 34680735 + PHF20 chr20 34487292 + Exonic hg19 STAD TCGA-CD-A4MH-01A 6 6 5'UTR-CDS Intra-chr q11.23 q11.22 Transcription factor Seq+ 49248 ChimerSeq STARFusion TCGA_RNA-Seq AMBRA1-CKAP5 AMBRA1 chr11 46515158 - CKAP5 chr11 46786806 - Exonic hg19 STAD TCGA-CD-A4MH-01A 6 4 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 49249 ChimerSeq STARFusion TCGA_RNA-Seq CELSR1-CERK CELSR1 chr22 46829290 - CERK chr22 47089385 - Exonic hg19 STAD TCGA-CD-A4MH-01A 6 4 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 49250 ChimerSeq STARFusion TCGA_RNA-Seq PIK3C2A-SERGEF PIK3C2A chr11 17229395 - SERGEF chr11 18017456 - Exonic hg19 STAD TCGA-CD-A4MH-01A 5 8 5'UTR-CDS Intra-chr p15.1 p15.1 49251 ChimerSeq STARFusion TCGA_RNA-Seq PANK2-ATRN PANK2 chr20 3899443 + ATRN chr20 3605158 + Exonic hg19 STAD TCGA-CD-A4MH-01A 6 3 In-Frame Intra-chr p13 p13 49252 ChimerSeq STARFusion TCGA_RNA-Seq WNK1-B4GALNT3 WNK1 chr12 936428 + B4GALNT3 chr12 657397 + Exonic hg19 STAD TCGA-CD-A4MH-01A 6 3 Out-of-frame Intra-chr p13.33 p13.33 KB Pub Seq+ 49253 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-PHF20 EPB41L1 chr20 34710669 + PHF20 chr20 34487292 + Exonic hg19 STAD TCGA-CD-A4MH-01A 5 6 5'UTR-CDS Intra-chr q11.23 q11.22 Transcription factor Seq+ 49254 ChimerSeq STARFusion TCGA_RNA-Seq RUVBL2-GRWD1 RUVBL2 chr19 49518407 + GRWD1 chr19 48953923 + Exonic hg19 STAD TCGA-CD-A4MH-01A 6 0 Out-of-frame Intra-chr q13.33 q13.33 49255 ChimerSeq STARFusion TCGA_RNA-Seq RHPN2-PEPD RHPN2 chr19 33481420 - PEPD chr19 33980963 - Exonic hg19 STAD TCGA-CD-A4MH-01A 2 14 In-Frame Intra-chr q13.11 q13.11 Seq+ 49256 ChimerSeq STARFusion TCGA_RNA-Seq C1orf63-TMEM50A C1orf63 chr1 25663531 - TMEM50A chr1 25669452 + Exonic hg19 STAD TCGA-CD-A4MH-01A 5 0 5'UTR-CDS Intra-chr p36.11 49257 ChimerSeq STARFusion TCGA_RNA-Seq P4HA1-ANXA7 P4HA1 chr10 74813109 - ANXA7 chr10 75160615 - Exonic hg19 STAD TCGA-CD-A4MH-01A 5 0 CDS-5'UTR Intra-chr q22.1 q22.2 Tumor suppressor gene 49258 ChimerSeq STARFusion TCGA_RNA-Seq PXN-COQ5 PXN chr12 120703420 - COQ5 chr12 120941884 - Exonic hg19 STAD TCGA-CD-A4MH-01A 3 8 Out-of-frame Intra-chr q24.23 q24.31 Seq+ 49259 ChimerSeq STARFusion TCGA_RNA-Seq REG1A-IGKC REG1A chr2 79350484 + IGKC chr2 89156789 - Exonic hg19 STAD TCGA-CD-A4MH-01A 5 0 Out-of-frame Intra-chr p12 p11.2 49260 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-PHF20 EPB41L1 chr20 34700402 + PHF20 chr20 34501171 + Exonic hg19 STAD TCGA-CD-A4MH-01A 3 6 5'UTR-CDS Intra-chr q11.23 q11.22 Transcription factor Seq+ 49261 ChimerSeq STARFusion TCGA_RNA-Seq AP3S2-GAREM AP3S2 chr15 90414707 - GAREM chr18 29868166 - Exonic hg19 STAD TCGA-CD-A4MH-01A 4 1 Out-of-frame Inter-chr q26.1 49262 ChimerSeq STARFusion TCGA_RNA-Seq ARRB1-MAP3K14 ARRB1 chr11 75062632 - MAP3K14 chr17 43351960 - Exonic hg19 STAD TCGA-CD-A4MH-01A 4 1 Out-of-frame Inter-chr q13.4 q21.31 49263 ChimerSeq STARFusion TCGA_RNA-Seq FAM208B-NET1 FAM208B chr10 5773166 + NET1 chr10 5493793 + Exonic hg19 STAD TCGA-CD-A4MH-01A 3 5 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 49264 ChimerSeq STARFusion TCGA_RNA-Seq PXN-COQ5 PXN chr12 120703420 - COQ5 chr12 120942786 - Exonic hg19 STAD TCGA-CD-A4MH-01A 2 8 Out-of-frame Intra-chr q24.23 q24.31 Seq+ 49265 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-PHF20 EPB41L1 chr20 34709738 + PHF20 chr20 34501171 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 6 5'UTR-CDS Intra-chr q11.23 q11.22 Transcription factor Seq+ 49266 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-PHF20 EPB41L1 chr20 34680735 + PHF20 chr20 34501171 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 6 5'UTR-CDS Intra-chr q11.23 q11.22 Transcription factor Seq+ 49267 ChimerSeq STARFusion TCGA_RNA-Seq SMU1-AQP3 SMU1 chr9 33068822 - AQP3 chr9 33443890 - Exonic hg19 STAD TCGA-CD-A4MH-01A 3 1 In-Frame Intra-chr p21.1 p13.3 49268 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP26-STARD7 ARHGAP26 chr5 142513632 + STARD7 chr2 96850827 - Exonic hg19 STAD TCGA-CD-A4MH-01A 3 0 Out-of-frame Inter-chr q31.3 q11.2 49269 ChimerSeq STARFusion TCGA_RNA-Seq BCL2L2-RPS3 BCL2L2 chr14 23777078 + RPS3 chr11 75115837 + Exonic hg19 STAD TCGA-CD-A4MH-01A 3 0 Out-of-frame Inter-chr q11.2 Oncogene q13.4 49270 ChimerSeq STARFusion TCGA_RNA-Seq DECR2-LSM5 DECR2 chr16 462456 + LSM5 chr7 32526686 - Exonic hg19 STAD TCGA-CD-A4MH-01A 3 0 Out-of-frame Inter-chr p14.3 49271 ChimerSeq STARFusion TCGA_RNA-Seq ELMOD3-ACTN4 ELMOD3 chr2 85581644 + ACTN4 chr19 39215167 + Exonic hg19 STAD TCGA-CD-A4MH-01A 3 0 Out-of-frame Inter-chr p11.2 49272 ChimerSeq STARFusion TCGA_RNA-Seq ESF1-MALAT1 ESF1 chr20 13694991 - MALAT1 chr11 65267126 + Exonic hg19 STAD TCGA-CD-A4MH-01A 3 0 Out-of-frame Inter-chr p12.1 q13.1 49273 ChimerSeq STARFusion TCGA_RNA-Seq FGD4-FAU FGD4 chr12 32764108 + FAU chr11 64888268 - Exonic hg19 STAD TCGA-CD-A4MH-01A 3 0 Out-of-frame Inter-chr p11.21 q13.1 49274 ChimerSeq STARFusion TCGA_RNA-Seq HES1-H19 HES1 chr3 193854183 + H19 chr11 2018758 - Exonic hg19 STAD TCGA-CD-A4MH-01A 3 0 Out-of-frame Inter-chr q29 Transcription factor p15.5 Tumor suppressor gene 49275 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-IGLL5 IGH@ chr14 106329413 - IGLL5 chr22 23237553 + Exonic hg19 STAD TCGA-CD-A4MH-01A 3 0 Out-of-frame Inter-chr 32.33 q11.22 49276 ChimerSeq STARFusion TCGA_RNA-Seq IGHJ6-IGLL5 IGHJ6 chr14 106329413 - IGLL5 chr22 23237553 + Exonic hg19 STAD TCGA-CD-A4MH-01A 3 0 Out-of-frame Inter-chr q11.22 49277 ChimerSeq STARFusion TCGA_RNA-Seq MVB12A-TPCN1 MVB12A chr19 17536072 + TPCN1 chr12 113735232 + Exonic hg19 STAD TCGA-CD-A4MH-01A 3 0 Out-of-frame Inter-chr p13.11 q24.13 49278 ChimerSeq STARFusion TCGA_RNA-Seq PCSK9-SH3GL1 PCSK9 chr1 55527229 + SH3GL1 chr19 4364117 - Exonic hg19 STAD TCGA-CD-A4MH-01A 3 0 In-Frame Inter-chr p32.3 p13.3 49279 ChimerSeq STARFusion TCGA_RNA-Seq RUVBL2-GRWD1 RUVBL2 chr19 49518530 + GRWD1 chr19 48953685 + Exonic hg19 STAD TCGA-CD-A4MH-01A 3 0 Out-of-frame Intra-chr q13.33 q13.33 49280 ChimerSeq STARFusion TCGA_RNA-Seq SHANK2-SOX8 SHANK2 chr11 70935743 - SOX8 chr16 1033728 + Exonic hg19 STAD TCGA-CD-A4MH-01A 3 0 5'UTR-CDS Inter-chr q13.4 p13.3 Transcription factor 49281 ChimerSeq STARFusion TCGA_RNA-Seq SYNPO-FTH1 SYNPO chr5 150004301 + FTH1 chr11 61734918 - Exonic hg19 STAD TCGA-CD-A4MH-01A 3 0 Out-of-frame Inter-chr q33.1 q12.3 49282 ChimerSeq STARFusion TCGA_RNA-Seq TOMM20-LINC00184 TOMM20 chr1 235277083 - LINC00184 chr1 234765355 + Exonic hg19 STAD TCGA-CD-A4MH-01A 3 0 CDS-5'UTR Intra-chr q42.3 q42.3 49283 ChimerSeq STARFusion TCGA_RNA-Seq UBL3-UTRN UBL3 chr13 30423649 - UTRN chr6 144852188 + Exonic hg19 STAD TCGA-CD-A4MH-01A 3 0 Out-of-frame Inter-chr q12.3 q24.2 49284 ChimerSeq STARFusion TCGA_RNA-Seq XPO1-PIP4K2B XPO1 chr2 61722590 - PIP4K2B chr17 36924249 - Exonic hg19 STAD TCGA-CD-A4MH-01A 3 0 CDS-3'UTR Inter-chr p15 Oncogene q12 49285 ChimerSeq STARFusion TCGA_RNA-Seq ZNF148-UMPS ZNF148 chr3 125093946 - UMPS chr3 124456415 + Exonic hg19 STAD TCGA-CD-A4MH-01A 3 0 5'UTR-5'UTR Intra-chr q21.2 Transcription factor q21.2 49286 ChimerSeq STARFusion TCGA_RNA-Seq CHMP3-CD8B CHMP3 chr2 86915355 - CD8B chr2 87042841 - Exonic hg19 STAD TCGA-CD-A4MH-01A 2 1 5'UTR-CDS Intra-chr p11.2 p11.2 49287 ChimerSeq STARFusion TCGA_RNA-Seq JMJD1C-REEP3 JMJD1C chr10 65140078 - REEP3 chr10 65326098 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 1 Out-of-frame Intra-chr q21.3 q21.3 49288 ChimerSeq STARFusion TCGA_RNA-Seq TRIM29-PVRL3 TRIM29 chr11 120055918 - PVRL3 chr3 110863746 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 1 5'UTR-CDS Inter-chr q23.3 49289 ChimerSeq STARFusion TCGA_RNA-Seq ABCC5-AGFG1 ABCC5 chr3 183677521 - AGFG1 chr2 228356263 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 Out-of-frame Inter-chr q27.1 q36.3 49290 ChimerSeq STARFusion TCGA_RNA-Seq ACYP2-RCC1 ACYP2 chr2 54284497 + RCC1 chr1 28856370 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 5'UTR-5'UTR Inter-chr p16.2 p35.3 49291 ChimerSeq STARFusion TCGA_RNA-Seq C12orf76-ANAPC7 C12orf76 chr12 110486168 - ANAPC7 chr12 110815422 - Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 Out-of-frame Intra-chr q24.11 q24.11 49292 ChimerSeq STARFusion TCGA_RNA-Seq C5orf15-SKP1 C5orf15 chr5 133304137 - SKP1 chr5 133502934 - Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 In-Frame Intra-chr q31.1 q31.1 49293 ChimerSeq STARFusion TCGA_RNA-Seq CHN1-CALD1 CHN1 chr2 175711608 - CALD1 chr7 134613505 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 Out-of-frame Inter-chr q31.1 q33 49294 ChimerSeq STARFusion TCGA_RNA-Seq CMC2-MYBL2 CMC2 chr16 81040339 - MYBL2 chr20 42310424 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 5'UTR-CDS Inter-chr q23.2 q13.12 Transcription factor 49295 ChimerSeq STARFusion TCGA_RNA-Seq COL28A1-ZCCHC2 COL28A1 chr7 7491950 - ZCCHC2 chr18 60206914 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 In-Frame Inter-chr p21.3 q21.33 Seq+ 49296 ChimerSeq STARFusion TCGA_RNA-Seq CWF19L2-NPAT CWF19L2 chr11 107325176 - NPAT chr11 108061227 - Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 Out-of-frame Intra-chr q22.3 q22.3 49297 ChimerSeq STARFusion TCGA_RNA-Seq DLC1-RUNX1 DLC1 chr8 13133771 - RUNX1 chr21 36206898 - Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 5'UTR-CDS Inter-chr p22 Tumor suppressor gene q22.12 Oncogene Tumor suppressor gene Transcription factor 49298 ChimerSeq STARFusion TCGA_RNA-Seq DNTTIP1-STK4 DNTTIP1 chr20 44424082 + STK4 chr20 43607084 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 Out-of-frame Intra-chr q13.12 Transcription factor q13.12 49299 ChimerSeq STARFusion TCGA_RNA-Seq DOCK7-USP1 DOCK7 chr1 63048855 - USP1 chr1 62908830 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 Out-of-frame Intra-chr p31.3 p31.3 49300 ChimerSeq STARFusion TCGA_RNA-Seq EIF4A2-RBMX2 EIF4A2 chr3 186505671 + RBMX2 chrX 129545322 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 Out-of-frame Inter-chr q27.3 q26.1 49301 ChimerSeq STARFusion TCGA_RNA-Seq ELOVL7-SUPT20H ELOVL7 chr5 60079921 - SUPT20H chr13 37625720 - Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 Out-of-frame Inter-chr q12.1 q13.3 49302 ChimerSeq STARFusion TCGA_RNA-Seq EMC2-MTA3 EMC2 chr8 109455927 + MTA3 chr2 42946128 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 Out-of-frame Inter-chr q23.1 p21 49303 ChimerSeq STARFusion TCGA_RNA-Seq ERP44-CCNB1IP1 ERP44 chr9 102778604 - CCNB1IP1 chr14 20781960 - Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 In-Frame Inter-chr q31.1 q11.2 49304 ChimerSeq STARFusion TCGA_RNA-Seq GDI1-NDUFS2 GDI1 chrX 153669542 + NDUFS2 chr1 161183946 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 Out-of-frame Inter-chr q28 q23.3 Seq+ 49305 ChimerSeq STARFusion TCGA_RNA-Seq GFPT1-N4BP2L2 GFPT1 chr2 69569284 - N4BP2L2 chr13 33095586 - Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 In-Frame Inter-chr p13.3 q13.1 49306 ChimerSeq STARFusion TCGA_RNA-Seq GLS-SPDYE2B GLS chr2 191746196 + SPDYE2B chr7 102292375 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 Out-of-frame Inter-chr q32.2 Tumor suppressor gene q22.1 49307 ChimerSeq STARFusion TCGA_RNA-Seq HAUS3-SKIL HAUS3 chr4 2243778 - SKIL chr3 170108011 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 5'UTR-CDS Inter-chr p16.3 q26.2 Tumor suppressor gene Transcription factor 49308 ChimerSeq STARFusion TCGA_RNA-Seq HERC4-SORBS1 HERC4 chr10 69773783 - SORBS1 chr10 97106209 - Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 Out-of-frame Intra-chr q21.3 q24.1 49309 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPA2B1-CD2AP HNRNPA2B1 chr7 26240192 - CD2AP chr6 47471016 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 Out-of-frame Inter-chr p15.2 p12.3 49310 ChimerSeq STARFusion TCGA_RNA-Seq ING1-RAB20 ING1 chr13 111366632 + RAB20 chr13 111176544 - Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 In-Frame Intra-chr q34 Tumor suppressor gene q34 49311 ChimerSeq STARFusion TCGA_RNA-Seq IPO11-CDC25B IPO11 chr5 61857084 + CDC25B chr20 3779059 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 Out-of-frame Inter-chr q12.1 p13 49312 ChimerSeq STARFusion TCGA_RNA-Seq ITGA3-LRWD1 ITGA3 chr17 48157739 + LRWD1 chr7 102107786 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 In-Frame Inter-chr q21.33 q22.1 49313 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-MGMT KANSL1 chr17 44301037 - MGMT chr10 131334505 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 5'UTR-CDS Inter-chr q26.3 49314 ChimerSeq STARFusion TCGA_RNA-Seq KCNQ1-ZNF195 KCNQ1 chr11 2610084 + ZNF195 chr11 3383119 - Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 In-Frame Intra-chr p15.5 p15.4 Transcription factor 49315 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1715-TTC37 KIAA1715 chr2 176844538 - TTC37 chr5 94858011 - Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 Out-of-frame Inter-chr q15 49316 ChimerSeq STARFusion TCGA_RNA-Seq LLGL1-ALKBH5 LLGL1 chr17 18141528 + ALKBH5 chr17 18110129 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 Out-of-frame Intra-chr Tumor suppressor gene p11.2 Seq+ 49317 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-FAM174B MATR3 chr5 138629494 + FAM174B chr15 93162689 - Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 5'UTR-CDS Inter-chr q31.2 q26.1 49318 ChimerSeq STARFusion TCGA_RNA-Seq MYO1D-ZNF585B MYO1D chr17 31091896 - ZNF585B chr19 37689956 - Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 Out-of-frame Inter-chr q11.2 q13.12 Transcription factor 49319 ChimerSeq STARFusion TCGA_RNA-Seq NDUFB2-TAF6 NDUFB2 chr7 140396642 + TAF6 chr7 99711891 - Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 Out-of-frame Intra-chr q34 q22.1 49320 ChimerSeq STARFusion TCGA_RNA-Seq NHLRC3-BPTF NHLRC3 chr13 39613848 + BPTF chr17 65941525 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 In-Frame Inter-chr q13.3 q24.2 Transcription factor 49321 ChimerSeq STARFusion TCGA_RNA-Seq NHLRC3-UBAP2 NHLRC3 chr13 39613848 + UBAP2 chr9 33973235 - Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 In-Frame Inter-chr q13.3 p13.3 49322 ChimerSeq STARFusion TCGA_RNA-Seq PCSK9-DNTTIP1 PCSK9 chr1 55505717 + DNTTIP1 chr20 44430638 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 In-Frame Inter-chr p32.3 q13.12 Transcription factor 49323 ChimerSeq STARFusion TCGA_RNA-Seq PDCD11-H2AFY2 PDCD11 chr10 105158285 + H2AFY2 chr10 71853491 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 In-Frame Intra-chr q24.33 q22.1 49324 ChimerSeq STARFusion TCGA_RNA-Seq POLN-SKIL POLN chr4 2243778 - SKIL chr3 170108011 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 5'UTR-CDS Inter-chr p16.3 q26.2 Tumor suppressor gene Transcription factor 49325 ChimerSeq STARFusion TCGA_RNA-Seq PPM1A-MBD2 PPM1A chr14 60716395 + MBD2 chr18 51715381 - Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 5'UTR-CDS Inter-chr q23.1 Tumor suppressor gene q21.2 Transcription factor 49326 ChimerSeq STARFusion TCGA_RNA-Seq PSMB1-ZFAS1 PSMB1 chr6 170862218 - ZFAS1 chr20 47905582 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 Out-of-frame Inter-chr q13.13 Tumor suppressor gene 49327 ChimerSeq STARFusion TCGA_RNA-Seq PSMD13-BET1L PSMD13 chr11 250865 + BET1L chr11 205667 - Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 In-Frame Intra-chr p15.5 p15.5 49328 ChimerSeq STARFusion TCGA_RNA-Seq QSOX2-SLC25A3 QSOX2 chr9 139137322 - SLC25A3 chr12 98989505 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 In-Frame Inter-chr q34.3 q23.1 49329 ChimerSeq STARFusion TCGA_RNA-Seq RECK-NUDCD3 RECK chr9 36065621 + NUDCD3 chr7 44524883 - Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 In-Frame Inter-chr p13.3 Tumor suppressor gene p13 49330 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L3-GYG2 SIPA1L3 chr19 38397998 + GYG2 chrX 2793851 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 5'UTR-CDS Inter-chr q13.13 p22.33 Seq+ 49331 ChimerSeq STARFusion TCGA_RNA-Seq SLC6A7-FRMD8 SLC6A7 chr5 149569923 + FRMD8 chr11 65178713 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 Out-of-frame Inter-chr q32 q13.1 49332 ChimerSeq STARFusion TCGA_RNA-Seq SRSF5-NELFCD SRSF5 chr14 70234999 + NELFCD chr20 57565965 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 Out-of-frame Inter-chr q24.1 q13.32 49333 ChimerSeq STARFusion TCGA_RNA-Seq STAM2-EXOC6 STAM2 chr2 153032117 - EXOC6 chr10 94757231 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 Out-of-frame Inter-chr q23.3 q23.33 49334 ChimerSeq STARFusion TCGA_RNA-Seq UBXN7-PVT1 UBXN7 chr3 196159198 - PVT1 chr8 129113226 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 CDS-5'UTR Inter-chr q29 q24.21 49335 ChimerSeq STARFusion TCGA_RNA-Seq ZNF69-ZCCHC6 ZNF69 chr19 11998801 + ZCCHC6 chr9 88925724 - Exonic hg19 STAD TCGA-CD-A4MH-01A 2 0 Out-of-frame Inter-chr p13.2 Transcription factor q21.33 49336 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-HAUS8 CEACAM5 chr19 42233234 + HAUS8 chr19 17184668 - Exonic hg19 STAD TCGA-CG-4474-01A 4 0 Out-of-frame Intra-chr q13.2 p13.11 49337 ChimerSeq STARFusion TCGA_RNA-Seq ELAVL1-FCER2 ELAVL1 chr19 8070379 - FCER2 chr19 7764731 - Exonic hg19 STAD TCGA-CG-4474-01A 2 2 5'UTR-5'UTR Intra-chr p13.2 p13.2 49338 ChimerSeq STARFusion TCGA_RNA-Seq SMURF1-CDK14 SMURF1 chr7 98658222 - CDK14 chr7 90675212 + Exonic hg19 STAD TCGA-BR-8484-01A 284 172 Out-of-frame Intra-chr q21.13 Seq+ 49339 ChimerSeq STARFusion TCGA_RNA-Seq TRRAP-ANKIB1 TRRAP chr7 98582667 + ANKIB1 chr7 91924203 + Exonic hg19 STAD TCGA-BR-8484-01A 36 25 CDS-5'UTR Intra-chr q22.1 Atypical:PIKK Oncogene q21.2 Seq+ 49340 ChimerSeq STARFusion TCGA_RNA-Seq SMURF1-TM2D3 SMURF1 chr7 98658222 - TM2D3 chr15 102166766 - Exonic hg19 STAD TCGA-BR-8484-01A 38 0 CDS-3'UTR Inter-chr q26.3 49341 ChimerSeq STARFusion TCGA_RNA-Seq RNF207-IGKC RNF207 chr1 6281030 + IGKC chr2 89161435 - Exonic hg19 STAD TCGA-BR-8484-01A 30 1 Out-of-frame Inter-chr p36.31 p11.2 49342 ChimerSeq STARFusion TCGA_RNA-Seq RNF207-IGKJ4 RNF207 chr1 6281030 + IGKJ4 chr2 89161435 - Exonic hg19 STAD TCGA-BR-8484-01A 30 1 Out-of-frame Inter-chr p36.31 p11.2 49343 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-CD74 LYZ chr12 69747111 + CD74 chr5 149792300 - Exonic hg19 STAD TCGA-BR-8484-01A 5 88 Out-of-frame Inter-chr q15 q33.1 49344 ChimerSeq STARFusion TCGA_RNA-Seq CLDN18-LYZ CLDN18 chr3 137750982 + LYZ chr12 69747549 + Exonic hg19 STAD TCGA-BR-8484-01A 13 34 Out-of-frame Inter-chr q22.3 q15 49345 ChimerSeq STARFusion TCGA_RNA-Seq PCGF3-HTT PCGF3 chr4 738476 + HTT chr4 3136128 + Exonic hg19 STAD TCGA-BR-8484-01A 17 16 In-Frame Intra-chr p16.3 p16.3 Seq+ 49346 ChimerSeq STARFusion TCGA_RNA-Seq IGHA1-ZYX IGHA1 chr14 106174693 - ZYX chr7 143088137 + Exonic hg19 STAD TCGA-BR-8484-01A 13 2 Out-of-frame Inter-chr q34 Tumor suppressor gene 49347 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-CLDN18 LYZ chr12 69747265 + CLDN18 chr3 137751240 + Exonic hg19 STAD TCGA-BR-8484-01A 3 40 Out-of-frame Inter-chr q15 q22.3 Seq+ 49348 ChimerSeq STARFusion TCGA_RNA-Seq CLDN18-LYZ CLDN18 chr3 137750957 + LYZ chr12 69747551 + Exonic hg19 STAD TCGA-BR-8484-01A 4 34 Out-of-frame Inter-chr q22.3 q15 49349 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-C2orf47 IGL@ chr22 23154762 + C2orf47 chr2 200820218 + Exonic hg19 STAD TCGA-BR-8484-01A 11 1 Out-of-frame Inter-chr q11.22 49350 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86193868 + CA3 chr8 86351941 + Exonic hg19 STAD TCGA-BR-8484-01A 6 12 3'UTR-CDS Intra-chr q21.2 q21.2 49351 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86295183 + Exonic hg19 STAD TCGA-BR-8484-01A 5 12 CDS-5'UTR Intra-chr q21.2 q21.2 49352 ChimerSeq STARFusion TCGA_RNA-Seq LMTK2-LYZ LMTK2 chr7 97837098 + LYZ chr12 69747553 + Exonic hg19 STAD TCGA-BR-8484-01A 4 15 Out-of-frame Inter-chr q21.3 q15 49353 ChimerSeq STARFusion TCGA_RNA-Seq BAIAP2L1-IGL@ BAIAP2L1 chr7 97935815 - IGL@ chr22 22698070 + Exonic hg19 STAD TCGA-BR-8484-01A 3 12 Out-of-frame Inter-chr q22.1 q11.22 49354 ChimerSeq STARFusion TCGA_RNA-Seq TUBB6-OSBPL1A TUBB6 chr18 12308794 + OSBPL1A chr18 21761243 - Exonic hg19 STAD TCGA-D7-A6EV-01A 41 6 Out-of-frame Intra-chr p11.21 q11.2 Seq+ 49355 ChimerSeq STARFusion TCGA_RNA-Seq TUBB6-OSBPL1A TUBB6 chr18 12308794 + OSBPL1A chr18 21759799 - Exonic hg19 STAD TCGA-D7-A6EV-01A 9 6 Out-of-frame Intra-chr p11.21 q11.2 Seq+ 49356 ChimerSeq STARFusion TCGA_RNA-Seq ASAP2-CPSF3 ASAP2 chr2 9475308 + CPSF3 chr2 9593042 + Exonic hg19 STAD TCGA-CG-4442-01A 15 100 In-Frame Intra-chr p25.1 p25.1 Seq+ 49357 ChimerSeq STARFusion TCGA_RNA-Seq IQGAP1-SEMA4B IQGAP1 chr15 90982631 + SEMA4B chr15 90760671 + Exonic hg19 STAD TCGA-CG-4442-01A 2 1 In-Frame Intra-chr q26.1 q26.1 Seq+ 49358 ChimerSeq STARFusion TCGA_RNA-Seq PLB1-IGL@ PLB1 chr2 28680019 + IGL@ chr22 23235961 + Exonic hg19 STAD TCGA-BR-A4J6-01A 30 0 Out-of-frame Inter-chr p23.2 q11.22 49359 ChimerSeq STARFusion TCGA_RNA-Seq PLB1-IGLC1 PLB1 chr2 28680019 + IGLC1 chr22 23235961 + Exonic hg19 STAD TCGA-BR-A4J6-01A 30 0 Out-of-frame Inter-chr p23.2 q11.22 49360 ChimerSeq STARFusion TCGA_RNA-Seq PLB1-IGLJ1 PLB1 chr2 28680019 + IGLJ1 chr22 23235961 + Exonic hg19 STAD TCGA-BR-A4J6-01A 30 0 Out-of-frame Inter-chr p23.2 q11.22 49361 ChimerSeq STARFusion TCGA_RNA-Seq PLB1-IGLL5 PLB1 chr2 28680019 + IGLL5 chr22 23235961 + Exonic hg19 STAD TCGA-BR-A4J6-01A 30 0 Out-of-frame Inter-chr p23.2 q11.22 49362 ChimerSeq STARFusion TCGA_RNA-Seq LTA4H-SLC25A24 LTA4H chr12 96402872 - SLC25A24 chr1 108686332 - Exonic hg19 STAD TCGA-BR-A4J6-01A 18 0 In-Frame Inter-chr q23.1 Seq+ 49363 ChimerSeq STARFusion TCGA_RNA-Seq PPP1CB-PLB1 PPP1CB chr2 29006844 + PLB1 chr2 28820872 + Exonic hg19 STAD TCGA-CD-A489-01A 9 7 Out-of-frame Intra-chr p23.2 p23.2 Seq+ 49364 ChimerSeq STARFusion TCGA_RNA-Seq SPDYA-PLB1 SPDYA chr2 29006844 + PLB1 chr2 28820872 + Exonic hg19 STAD TCGA-CD-A489-01A 9 7 5'UTR-CDS Intra-chr p23.2 p23.2 49365 ChimerSeq STARFusion TCGA_RNA-Seq DGCR2-CLTCL1 DGCR2 chr22 19044499 - CLTCL1 chr22 19263353 - Exonic hg19 STAD TCGA-CD-A489-01A 8 1 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 49366 ChimerSeq STARFusion TCGA_RNA-Seq PPP1CB-PLB1 PPP1CB chr2 29006844 + PLB1 chr2 28817678 + Exonic hg19 STAD TCGA-CD-A489-01A 4 7 Out-of-frame Intra-chr p23.2 p23.2 Seq+ 49367 ChimerSeq STARFusion TCGA_RNA-Seq SPDYA-PLB1 SPDYA chr2 29006844 + PLB1 chr2 28817678 + Exonic hg19 STAD TCGA-CD-A489-01A 4 7 Out-of-frame Intra-chr p23.2 p23.2 49368 ChimerSeq STARFusion TCGA_RNA-Seq CDK17-C12orf55 CDK17 chr12 96728497 - C12orf55 chr12 96906764 + Exonic hg19 STAD TCGA-BR-8679-01A 261 260 Out-of-frame Intra-chr q23.1 49369 ChimerSeq STARFusion TCGA_RNA-Seq CDK17-C12orf55 CDK17 chr12 96728497 - C12orf55 chr12 96912706 + Exonic hg19 STAD TCGA-BR-8679-01A 89 253 Out-of-frame Intra-chr q23.1 49370 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL1-IFI6 RN7SL1 chr14 50053530 + IFI6 chr1 27992763 - Exonic hg19 STAD TCGA-BR-8679-01A 20 5 Out-of-frame Inter-chr q21.3 p35.3 49371 ChimerSeq STARFusion TCGA_RNA-Seq ARID1A-UBE2U ARID1A chr1 27059283 + UBE2U chr1 64686542 + Exonic hg19 STAD TCGA-BR-8679-01A 14 12 Out-of-frame Intra-chr p36.11 Oncogene Tumor suppressor gene p31.3 Seq+ 49372 ChimerSeq STARFusion TCGA_RNA-Seq C12orf55-LRMP C12orf55 chr12 96915967 + LRMP chr12 25188587 + Exonic hg19 STAD TCGA-BR-8679-01A 13 12 Out-of-frame Intra-chr p12.1 Tumor suppressor gene 49373 ChimerSeq STARFusion TCGA_RNA-Seq PDXDC1-CENPT PDXDC1 chr16 15100440 + CENPT chr16 67869561 - Exonic hg19 STAD TCGA-BR-8679-01A 3 9 CDS-5'UTR Intra-chr p13.11 q22.1 Transcription factor 49374 ChimerSeq STARFusion TCGA_RNA-Seq C12orf55-LRMP C12orf55 chr12 96915967 + LRMP chr12 25189519 + Exonic hg19 STAD TCGA-BR-8679-01A 2 12 Out-of-frame Intra-chr p12.1 Tumor suppressor gene 49375 ChimerSeq STARFusion TCGA_RNA-Seq PARD3-COLQ PARD3 chr10 34759013 - COLQ chr3 15520889 - Exonic hg19 STAD TCGA-BR-8365-01A 9 5 In-Frame Inter-chr p11.21 p25.1 Seq+ 49376 ChimerSeq STARFusion TCGA_RNA-Seq CTPS2-IL1RAPL1 CTPS2 chrX 16716358 - IL1RAPL1 chrX 28807438 + Exonic hg19 STAD TCGA-BR-8365-01A 4 2 Out-of-frame Intra-chr p22.2 p21.3 Seq+ 49377 ChimerSeq STARFusion TCGA_RNA-Seq IGHA1-IGKC IGHA1 chr14 106174467 - IGKC chr2 89156789 - Exonic hg19 STAD TCGA-BR-8365-01A 3 1 Out-of-frame Inter-chr p11.2 49378 ChimerSeq STARFusion TCGA_RNA-Seq BHLHB9-LINC00630 BHLHB9 chrX 101975955 + LINC00630 chrX 102081897 + Exonic hg19 STAD TCGA-BR-8365-01A 3 0 Out-of-frame Intra-chr q22.1 q22.1 49379 ChimerSeq STARFusion TCGA_RNA-Seq EMC10-MT2A EMC10 chr19 50985752 + MT2A chr16 56642570 + Exonic hg19 STAD TCGA-BR-8365-01A 3 0 Out-of-frame Inter-chr q13.33 q13 Tumor suppressor gene 49380 ChimerSeq STARFusion TCGA_RNA-Seq HINT1-SAFB2 HINT1 chr5 130498093 - SAFB2 chr19 5595508 - Exonic hg19 STAD TCGA-BR-8365-01A 3 0 3'UTR-CDS Inter-chr q23.3 Tumor suppressor gene p13.3 Tumor suppressor gene Transcription factor 49381 ChimerSeq STARFusion TCGA_RNA-Seq IGHJ6-IGLL5 IGHJ6 chr14 106329413 - IGLL5 chr22 23237553 + Exonic hg19 STAD TCGA-BR-8365-01A 3 0 Out-of-frame Inter-chr q11.22 49382 ChimerSeq STARFusion TCGA_RNA-Seq MYOF-KIAA1217 MYOF chr10 95216639 - KIAA1217 chr10 24508555 + Exonic hg19 STAD TCGA-BR-8365-01A 3 0 Out-of-frame Intra-chr q23.33 p12.2 49383 ChimerSeq STARFusion TCGA_RNA-Seq NFIC-PRPF8 NFIC chr19 3463616 + PRPF8 chr17 1576481 - Exonic hg19 STAD TCGA-BR-8365-01A 3 0 Out-of-frame Inter-chr p13.3 Transcription factor 49384 ChimerSeq STARFusion TCGA_RNA-Seq NR1D2-ATF7 NR1D2 chr3 24022079 + ATF7 chr12 54019773 - Exonic hg19 STAD TCGA-BR-8365-01A 3 0 Out-of-frame Inter-chr p24.2 Transcription factor q13.13 Transcription factor 49385 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL1-ADCY9 RN7SL1 chr14 50053471 + ADCY9 chr16 4033924 - Exonic hg19 STAD TCGA-BR-8365-01A 3 0 Out-of-frame Inter-chr q21.3 p13.3 49386 ChimerSeq STARFusion TCGA_RNA-Seq SPEG-CSDE1 SPEG chr2 220309883 + CSDE1 chr1 115263307 - Exonic hg19 STAD TCGA-BR-8365-01A 3 0 Out-of-frame Inter-chr q35 CAMK:Trio p13.2 49387 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN10-COL1A1 TSPAN10 chr17 79612268 + COL1A1 chr17 48272839 - Exonic hg19 STAD TCGA-BR-8365-01A 3 0 Out-of-frame Intra-chr q25.3 q21.33 Oncogene 49388 ChimerSeq STARFusion TCGA_RNA-Seq TUBA1C-FLNC TUBA1C chr12 49582811 + FLNC chr7 128470495 + Exonic hg19 STAD TCGA-BR-8365-01A 3 0 Out-of-frame Inter-chr q13.12 q32.1 49389 ChimerSeq STARFusion TCGA_RNA-Seq ABI2-DIAPH2 ABI2 chr2 204231767 + DIAPH2 chrX 96354693 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 In-Frame Inter-chr q33.2 Tumor suppressor gene q21.33 49390 ChimerSeq STARFusion TCGA_RNA-Seq ACTL6A-PPFIA1 ACTL6A chr3 179280905 + PPFIA1 chr11 70200407 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 Out-of-frame Inter-chr q26.33 q13.3 49391 ChimerSeq STARFusion TCGA_RNA-Seq ACTN1-PHACTR4 ACTN1 chr14 69387723 - PHACTR4 chr1 28800066 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 In-Frame Inter-chr q24.1 p35.3 Tumor suppressor gene 49392 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD44-MARCH7 ANKRD44 chr2 198175302 - 2019_ 3_ 7_ chr2 160585520 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 Out-of-frame Intra-chr q33.1 q24.2 49393 ChimerSeq STARFusion TCGA_RNA-Seq AP5S1-CHP1 AP5S1 chr20 3802940 + CHP1 chr15 41549108 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 Out-of-frame Inter-chr p13 q15.1 49394 ChimerSeq STARFusion TCGA_RNA-Seq ARL13B-EPS8 ARL13B chr3 93714788 + EPS8 chr12 15823857 - Exonic hg19 STAD TCGA-BR-8365-01A 2 0 In-Frame Inter-chr q11.1 p12.3 49395 ChimerSeq STARFusion TCGA_RNA-Seq C4orf36-SPATS2 C4orf36 chr4 87853374 - SPATS2 chr12 49893853 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 5'UTR-CDS Inter-chr q21.3 q13.12 49396 ChimerSeq STARFusion TCGA_RNA-Seq C7orf41-ZNRF2 C7orf41 chr7 30174914 + ZNRF2 chr7 30363258 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 Out-of-frame Intra-chr p14.3 49397 ChimerSeq STARFusion TCGA_RNA-Seq CDC42EP5-SP1 CDC42EP5 chr19 54982766 - SP1 chr12 53775443 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 5'UTR-5'UTR Inter-chr q13.13 Transcription factor 49398 ChimerSeq STARFusion TCGA_RNA-Seq COL6A3-PLCB4 COL6A3 chr2 238305370 - PLCB4 chr20 9416207 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 In-Frame Inter-chr q37.3 p12.3 49399 ChimerSeq STARFusion TCGA_RNA-Seq CWC25-TRUB1 CWC25 chr17 36981419 - TRUB1 chr10 116730127 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 Out-of-frame Inter-chr q12 q25.3 49400 ChimerSeq STARFusion TCGA_RNA-Seq DLG5-RSU1 DLG5 chr10 79628887 - RSU1 chr10 16806509 - Exonic hg19 STAD TCGA-BR-8365-01A 2 0 In-Frame Intra-chr q22.3 p13 49401 ChimerSeq STARFusion TCGA_RNA-Seq DOCK11-DIDO1 DOCK11 chrX 117630036 + DIDO1 chr20 61528348 - Exonic hg19 STAD TCGA-BR-8365-01A 2 0 Out-of-frame Inter-chr q24 q13.33 Tumor suppressor gene 49402 ChimerSeq STARFusion TCGA_RNA-Seq ENC1-INO80D ENC1 chr5 73936132 - INO80D chr2 206893059 - Exonic hg19 STAD TCGA-BR-8365-01A 2 0 5'UTR-CDS Inter-chr q13.3 49403 ChimerSeq STARFusion TCGA_RNA-Seq FAM172A-PTGER4 FAM172A chr5 93217176 - PTGER4 chr5 40691881 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 In-Frame Intra-chr q15 Tumor suppressor gene p13.1 49404 ChimerSeq STARFusion TCGA_RNA-Seq FBXL7-ARHGAP26 FBXL7 chr5 15616181 + ARHGAP26 chr5 142393645 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 Out-of-frame Intra-chr p15.1 q31.3 49405 ChimerSeq STARFusion TCGA_RNA-Seq FLNA-TIMM23 FLNA chrX 153582519 - TIMM23 chr10 51612988 - Exonic hg19 STAD TCGA-BR-8365-01A 2 0 In-Frame Inter-chr q28 Tumor suppressor gene q11.22 49406 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-MYH11 GAS6 chr13 114566548 - MYH11 chr16 15850371 - Exonic hg19 STAD TCGA-BR-8365-01A 2 0 In-Frame Inter-chr q34 Oncogene Oncogene 49407 ChimerSeq STARFusion TCGA_RNA-Seq GRK5-UNC5C GRK5 chr10 121156284 + UNC5C chr4 96127947 - Exonic hg19 STAD TCGA-BR-8365-01A 2 0 Out-of-frame Inter-chr q26.11 q22.3 Tumor suppressor gene 49408 ChimerSeq STARFusion TCGA_RNA-Seq HMOX1-PSMB1 HMOX1 chr22 35785956 + PSMB1 chr6 170858201 - Exonic hg19 STAD TCGA-BR-8365-01A 2 0 Out-of-frame Inter-chr q12.3 49409 ChimerSeq STARFusion TCGA_RNA-Seq HS3ST5-HDAC2 HS3ST5 chr6 114489515 - HDAC2 chr6 114281182 - Exonic hg19 STAD TCGA-BR-8365-01A 2 0 5'UTR-CDS Intra-chr q22.1 q21 49410 ChimerSeq STARFusion TCGA_RNA-Seq ICK-COG6 ICK chr6 52895863 - COG6 chr13 40261640 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 Out-of-frame Inter-chr p12.1 CMGC:RCK Oncogene q14.11 49411 ChimerSeq STARFusion TCGA_RNA-Seq ITCH-KCNT2 ITCH chr20 32981687 + KCNT2 chr1 196227624 - Exonic hg19 STAD TCGA-BR-8365-01A 2 0 Out-of-frame Inter-chr q11.22 q31.3 49412 ChimerSeq STARFusion TCGA_RNA-Seq ITSN1-SH3BGR ITSN1 chr21 35172233 + SH3BGR chr21 40871749 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 In-Frame Intra-chr q22.11 q22.2 49413 ChimerSeq STARFusion TCGA_RNA-Seq KCTD13-JMJD1C KCTD13 chr16 29934511 - JMJD1C chr10 64960437 - Exonic hg19 STAD TCGA-BR-8365-01A 2 0 Out-of-frame Inter-chr p11.2 q21.3 49414 ChimerSeq STARFusion TCGA_RNA-Seq LDB2-PKD2 LDB2 chr4 16899977 - PKD2 chr4 88940610 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 Out-of-frame Intra-chr p15.32 q22.1 CAMK:PKD 49415 ChimerSeq STARFusion TCGA_RNA-Seq MAD1L1-FTSJ2 MAD1L1 chr7 2252847 - FTSJ2 chr7 2275199 - Exonic hg19 STAD TCGA-BR-8365-01A 2 0 Out-of-frame Intra-chr p22.3 Tumor suppressor gene Seq+ 49416 ChimerSeq STARFusion TCGA_RNA-Seq MAP4K4-ANXA4 MAP4K4 chr2 102486877 + ANXA4 chr2 70015186 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 CDS-5'UTR Intra-chr q11.2 p13.3 49417 ChimerSeq STARFusion TCGA_RNA-Seq MICALL1-ADAM8 MICALL1 chr22 38308499 + ADAM8 chr10 135077269 - Exonic hg19 STAD TCGA-BR-8365-01A 2 0 In-Frame Inter-chr q13.1 q26.3 49418 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-PTPN4 MYH9 chr22 36783852 - PTPN4 chr2 120658294 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 5'UTR-CDS Inter-chr q12.3 Oncogene Tumor suppressor gene q14.2 49419 ChimerSeq STARFusion TCGA_RNA-Seq PAPD4-GTF3C3 PAPD4 chr5 78908898 + GTF3C3 chr2 197637877 - Exonic hg19 STAD TCGA-BR-8365-01A 2 0 5'UTR-CDS Inter-chr q14.1 q33.1 49420 ChimerSeq STARFusion TCGA_RNA-Seq PARD3-HIPK3 PARD3 chr10 35103804 - HIPK3 chr11 33307959 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 CDS-5'UTR Inter-chr p11.21 p13 CMGC:DYRK 49421 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA1-GPRC5C PLEKHA1 chr10 124134322 + GPRC5C chr17 72439957 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 5'UTR-CDS Inter-chr q26.13 q25.1 49422 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R1-SMG1 PPP6R1 chr19 55748011 - SMG1 chr16 18896484 - Exonic hg19 STAD TCGA-BR-8365-01A 2 0 Out-of-frame Inter-chr q13.42 p12.3 Atypical:PIKK 49423 ChimerSeq STARFusion TCGA_RNA-Seq PRKG1-SLC24A3 PRKG1 chr10 52913090 + SLC24A3 chr20 19496132 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 In-Frame Inter-chr q11.23 p11.23 49424 ChimerSeq STARFusion TCGA_RNA-Seq QRICH1-BANP QRICH1 chr3 49131345 - BANP chr16 88105675 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 5'UTR-CDS Inter-chr p21.31 q24.2 Tumor suppressor gene 49425 ChimerSeq STARFusion TCGA_RNA-Seq RICTOR-OSMR RICTOR chr5 39074213 - OSMR chr5 38931985 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 In-Frame Intra-chr p13.1 p13.1 49426 ChimerSeq STARFusion TCGA_RNA-Seq ROR1-SPSB1 ROR1 chr1 64240179 + SPSB1 chr1 9415802 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 CDS-5'UTR Intra-chr p31.3 TK:Ror p36.22 49427 ChimerSeq STARFusion TCGA_RNA-Seq SCML1-NHS SCML1 chrX 17767624 + NHS chrX 17746769 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 Out-of-frame Intra-chr p22.13 p22.2 49428 ChimerSeq STARFusion TCGA_RNA-Seq TMCC1-RAB7A TMCC1 chr3 129599152 - RAB7A chr3 128514203 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 5'UTR-5'UTR Intra-chr q22.1 q21.3 Tumor suppressor gene 49429 ChimerSeq STARFusion TCGA_RNA-Seq TMEM198-OBSL1 TMEM198 chr2 220409615 + OBSL1 chr2 220421445 - Exonic hg19 STAD TCGA-BR-8365-01A 2 0 In-Frame Intra-chr q35 q35 49430 ChimerSeq STARFusion TCGA_RNA-Seq TMOD1-BNC2 TMOD1 chr9 100264085 + BNC2 chr9 16419647 - Exonic hg19 STAD TCGA-BR-8365-01A 2 0 5'UTR-CDS Intra-chr q22.33 p22.2 Transcription factor 49431 ChimerSeq STARFusion TCGA_RNA-Seq TTC9C-SLC3A2 TTC9C chr11 62503036 + SLC3A2 chr11 62650380 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 In-Frame Intra-chr q12.3 q12.3 49432 ChimerSeq STARFusion TCGA_RNA-Seq WBP1L-BMS1 WBP1L chr10 104503900 + BMS1 chr10 43312766 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 In-Frame Intra-chr q24.32 q11.21 49433 ChimerSeq STARFusion TCGA_RNA-Seq WDR37-CCT3 WDR37 chr10 1102908 + CCT3 chr1 156294880 - Exonic hg19 STAD TCGA-BR-8365-01A 2 0 5'UTR-CDS Inter-chr p15.3 q22 49434 ChimerSeq STARFusion TCGA_RNA-Seq ZNF546-SMTN ZNF546 chr19 40503822 + SMTN chr22 31484499 + Exonic hg19 STAD TCGA-BR-8365-01A 2 0 5'UTR-CDS Inter-chr Transcription factor q12.2 49435 ChimerSeq STARFusion TCGA_RNA-Seq PARD3-ARHGAP12 PARD3 chr10 35103804 - ARHGAP12 chr10 32132514 - Exonic hg19 STAD TCGA-D7-6528-01A 38 0 In-Frame Intra-chr p11.21 p11.22 Seq+ 49436 ChimerSeq STARFusion TCGA_RNA-Seq ITCH-DYNLRB1 ITCH chr20 33012331 + DYNLRB1 chr20 33114073 + Exonic hg19 STAD TCGA-D7-6528-01A 30 0 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 49437 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1551-LOH12CR1 KIAA1551 chr12 32113805 + LOH12CR1 chr12 12588562 + Exonic hg19 STAD TCGA-VQ-A8PK-01A 117 15 Out-of-frame Intra-chr p11.21 49438 ChimerSeq STARFusion TCGA_RNA-Seq USP54-AP3M1 USP54 chr10 75331179 - AP3M1 chr10 75898689 - Exonic hg19 STAD TCGA-VQ-A8PK-01A 22 4 CDS-5'UTR Intra-chr q22.2 q22.2 Seq+ 49439 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 STAD TCGA-VQ-A8PK-01A 19 0 Out-of-frame Inter-chr q13.33 p21.1 49440 ChimerSeq STARFusion TCGA_RNA-Seq ABR-ASPA ABR chr17 1132087 - ASPA chr17 3384897 + Exonic hg19 STAD TCGA-VQ-A8PK-01A 16 1 5'UTR-CDS Intra-chr p13.3 p13.2 Seq+ 49441 ChimerSeq STARFusion TCGA_RNA-Seq STAG3L1-TYW1 STAG3L1 chr7 75014432 + TYW1 chr7 66514936 + Exonic hg19 STAD TCGA-VQ-A8PK-01A 9 4 3'UTR-CDS Intra-chr q11.23 q11.21 49442 ChimerSeq STARFusion TCGA_RNA-Seq VAV2-BRD3 VAV2 chr9 136804225 - BRD3 chr9 136918712 - Exonic hg19 STAD TCGA-VQ-A8PK-01A 9 2 CDS-5'UTR Intra-chr q34.2 q34.2 Atypical:BRD Oncogene Seq+ 49443 ChimerSeq STARFusion TCGA_RNA-Seq USP54-AP3M1 USP54 chr10 75331179 - AP3M1 chr10 75898140 - Exonic hg19 STAD TCGA-VQ-A8PK-01A 8 4 CDS-5'UTR Intra-chr q22.2 q22.2 Seq+ 49444 ChimerSeq STARFusion TCGA_RNA-Seq MSH2-EPCAM MSH2 chr2 47643568 + EPCAM chr2 47612305 + Exonic hg19 STAD TCGA-CD-8533-01A 52 23 Out-of-frame Intra-chr p21 Oncogene Tumor suppressor gene p21 Seq+ 49445 ChimerSeq STARFusion TCGA_RNA-Seq SEPT7P2-PSPH SEPT7P2 chr7 45808259 - PSPH chr7 56088924 - Exonic hg19 STAD TCGA-CD-8533-01A 29 0 3'UTR-5'UTR Intra-chr p12.3 p11.2 Seq+ 49446 ChimerSeq STARFusion TCGA_RNA-Seq INSR-S1PR2 INSR chr19 7267356 - S1PR2 chr19 10335623 - Exonic hg19 STAD TCGA-CD-8533-01A 11 9 CDS-5'UTR Intra-chr p13.2 TK:InsR p13.2 Seq+ 49447 ChimerSeq STARFusion TCGA_RNA-Seq UBA2-FUCA2 UBA2 chr19 34929671 + FUCA2 chr6 143818634 - Exonic hg19 STAD TCGA-CD-8533-01A 11 4 In-Frame Inter-chr q13.11 q24.2 Seq+ 49448 ChimerSeq STARFusion TCGA_RNA-Seq CCND1-IGF2 CCND1 chr11 69467544 + IGF2 chr11 2153004 - Exonic hg19 STAD TCGA-CD-8533-01A 3 9 Out-of-frame Intra-chr q13.3 Oncogene p15.5 Oncogene 49449 ChimerSeq STARFusion TCGA_RNA-Seq CCND1-IGF2 CCND1 chr11 69467545 + IGF2 chr11 2152788 - Exonic hg19 STAD TCGA-CD-8533-01A 3 9 Out-of-frame Intra-chr q13.3 Oncogene p15.5 Oncogene 49450 ChimerSeq STARFusion TCGA_RNA-Seq RERE-UTS2 RERE chr1 8482787 - UTS2 chr1 7913565 - Exonic hg19 STAD TCGA-VQ-A94R-01A 94 11 5'UTR-5'UTR Intra-chr p36.23 p36.23 Seq+ 49451 ChimerSeq STARFusion TCGA_RNA-Seq RERE-LINC00319 RERE chr1 8482787 - LINC00319 chr21 44868647 + Exonic hg19 STAD TCGA-VQ-A94R-01A 26 6 5'UTR-5'UTR Inter-chr p36.23 q22.3 Seq+ 49452 ChimerSeq STARFusion TCGA_RNA-Seq RERE-LINC00319 RERE chr1 8482787 - LINC00319 chr21 44871053 + Exonic hg19 STAD TCGA-VQ-A94R-01A 14 6 5'UTR-5'UTR Inter-chr p36.23 q22.3 Seq+ 49453 ChimerSeq STARFusion TCGA_RNA-Seq HEXB-FAM169A HEXB chr5 74001145 + FAM169A chr5 74078959 - Exonic hg19 STAD TCGA-BR-8373-01A 99 36 In-Frame Intra-chr q13.3 q13.3 Seq+ 49454 ChimerSeq STARFusion TCGA_RNA-Seq RIPK1-SERPINB9 RIPK1 chr6 3064293 + SERPINB9 chr6 2900855 - Exonic hg19 STAD TCGA-BR-8373-01A 81 6 5'UTR-5'UTR Intra-chr p25.2 TKL:RIPK p25.2 49455 ChimerSeq STARFusion TCGA_RNA-Seq FCGBP-SPTAN1 FCGBP chr19 40408827 - SPTAN1 chr9 131314897 + Exonic hg19 STAD TCGA-BR-8373-01A 77 0 Out-of-frame Inter-chr q34.11 49456 ChimerSeq STARFusion TCGA_RNA-Seq C21orf59-URB1 C21orf59 chr21 33979959 - URB1 chr21 33750850 - Exonic hg19 STAD TCGA-BR-8373-01A 71 22 In-Frame Intra-chr q22.11 q22.11 Seq+ 49457 ChimerSeq STARFusion TCGA_RNA-Seq SMG5-PMF1 SMG5 chr1 156235572 - PMF1 chr1 156206079 + Exonic hg19 STAD TCGA-BR-8373-01A 64 46 Out-of-frame Intra-chr q22 q22 Seq+ 49458 ChimerSeq STARFusion TCGA_RNA-Seq ITSN1-LINC00945 ITSN1 chr21 35015019 + LINC00945 chr21 34435098 + Exonic hg19 STAD TCGA-BR-8373-01A 54 57 Out-of-frame Intra-chr q22.11 q22.11 49459 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-QRSL1 PVT1 chr8 128806980 + QRSL1 chr6 107110855 + Exonic hg19 STAD TCGA-BR-8373-01A 51 43 5'UTR-CDS Inter-chr q24.21 q21 Seq+ 49460 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D15-LGR5 TBC1D15 chr12 72233591 + LGR5 chr12 71946853 + Exonic hg19 STAD TCGA-BR-8373-01A 58 2 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 49461 ChimerSeq STARFusion TCGA_RNA-Seq LINC00511-SLC39A11 LINC00511 chr17 70588342 - SLC39A11 chr17 70732858 - Exonic hg19 STAD TCGA-BR-8373-01A 45 24 3'UTR-CDS Intra-chr q24.3 q25.1 49462 ChimerSeq STARFusion TCGA_RNA-Seq UBE2L3-PI4KAP2 UBE2L3 chr22 21947245 + PI4KAP2 chr22 21834291 - Exonic hg19 STAD TCGA-BR-8373-01A 36 18 CDS-3'UTR Intra-chr q11.21 q11.21 49463 ChimerSeq STARFusion TCGA_RNA-Seq MBNL2-HS6ST3 MBNL2 chr13 97928663 + HS6ST3 chr13 97484744 + Exonic hg19 STAD TCGA-BR-8373-01A 35 15 Out-of-frame Intra-chr q32.1 Transcription factor q32.1 Seq+ 49464 ChimerSeq STARFusion TCGA_RNA-Seq ISYNA1-SUGP2 ISYNA1 chr19 18545346 - SUGP2 chr19 19102461 - Exonic hg19 STAD TCGA-BR-8373-01A 30 9 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 49465 ChimerSeq STARFusion TCGA_RNA-Seq GDI2-IL2RA GDI2 chr10 5815805 - IL2RA chr10 6054859 - Exonic hg19 STAD TCGA-BR-8373-01A 28 11 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 49466 ChimerSeq STARFusion TCGA_RNA-Seq IQGAP1-SEMA4B IQGAP1 chr15 90934105 + SEMA4B chr15 90760671 + Exonic hg19 STAD TCGA-BR-8373-01A 28 7 Out-of-frame Intra-chr q26.1 q26.1 Seq+ 49467 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP5-NPAS3 ARHGAP5 chr14 32563592 + NPAS3 chr14 33836392 + Exonic hg19 STAD TCGA-BR-8373-01A 24 20 Out-of-frame Intra-chr q12 q13.1 Transcription factor Seq+ 49468 ChimerSeq STARFusion TCGA_RNA-Seq KMT2E-LHFPL3 KMT2E chr7 104681470 + LHFPL3 chr7 104546634 + Exonic hg19 STAD TCGA-BR-8373-01A 24 17 Out-of-frame Intra-chr q22.3 q22.2 49469 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-QRSL1 PVT1 chr8 128808317 + QRSL1 chr6 107110855 + Exonic hg19 STAD TCGA-BR-8373-01A 16 43 5'UTR-CDS Inter-chr q24.21 q21 Seq+ 49470 ChimerSeq STARFusion TCGA_RNA-Seq FCGBP-SPTAN1 FCGBP chr19 40377204 - SPTAN1 chr9 131314897 + Exonic hg19 STAD TCGA-BR-8373-01A 26 0 Out-of-frame Inter-chr q34.11 49471 ChimerSeq STARFusion TCGA_RNA-Seq FCGBP-SPTAN1 FCGBP chr19 40392889 - SPTAN1 chr9 131314897 + Exonic hg19 STAD TCGA-BR-8373-01A 26 0 Out-of-frame Inter-chr q34.11 49472 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-QRSL1 PVT1 chr8 128808254 + QRSL1 chr6 107110855 + Exonic hg19 STAD TCGA-BR-8373-01A 15 43 5'UTR-CDS Inter-chr q24.21 q21 Seq+ 49473 ChimerSeq STARFusion TCGA_RNA-Seq ITGB5-ZNF148 ITGB5 chr3 124527869 - ZNF148 chr3 125032500 - Exonic hg19 STAD TCGA-BR-8373-01A 23 10 CDS-5'UTR Intra-chr q21.2 q21.2 Transcription factor Seq+ 49474 ChimerSeq STARFusion TCGA_RNA-Seq IKBKAP-EPB41L4B IKBKAP chr9 111696144 - EPB41L4B chr9 112042201 - Exonic hg19 STAD TCGA-BR-8373-01A 21 11 5'UTR-CDS Intra-chr q31.3 q31.3 Seq+ 49475 ChimerSeq STARFusion TCGA_RNA-Seq MIB1-GREB1L MIB1 chr18 19359646 + GREB1L chr18 19088079 + Exonic hg19 STAD TCGA-BR-8373-01A 22 5 Out-of-frame Intra-chr q11.2 q11.1 Seq+ 49476 ChimerSeq STARFusion TCGA_RNA-Seq SKI-PRKCZ SKI chr1 2235541 + PRKCZ chr1 2066701 + Exonic hg19 STAD TCGA-BR-8373-01A 21 4 In-Frame Intra-chr p36.33 Transcription factor p36.33 Seq+ 49477 ChimerSeq STARFusion TCGA_RNA-Seq SMG5-PMF1 SMG5 chr1 156235572 - PMF1 chr1 156206140 + Exonic hg19 STAD TCGA-BR-8373-01A 9 46 Out-of-frame Intra-chr q22 q22 Seq+ 49478 ChimerSeq STARFusion TCGA_RNA-Seq WWP2-NFAT5 WWP2 chr16 69876023 + NFAT5 chr16 69660306 + Exonic hg19 STAD TCGA-BR-8373-01A 16 9 Out-of-frame Intra-chr q22.1 q22.1 Transcription factor Seq+ 49479 ChimerSeq STARFusion TCGA_RNA-Seq TCEA3-HMGCL TCEA3 chr1 23743742 - HMGCL chr1 24152673 - Exonic hg19 STAD TCGA-BR-8373-01A 17 3 CDS-5'UTR Intra-chr p36.11 Seq+ 49480 ChimerSeq STARFusion TCGA_RNA-Seq CMTM7-GPD1L CMTM7 chr3 32433557 + GPD1L chr3 32169568 + Exonic hg19 STAD TCGA-BR-8373-01A 16 2 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 49481 ChimerSeq STARFusion TCGA_RNA-Seq QRSL1-CD24P4 QRSL1 chr6 107077580 + CD24P4 chrY 21154526 - Exonic hg19 STAD TCGA-BR-8373-01A 12 12 Out-of-frame Inter-chr q21 q11.222 49482 ChimerSeq STARFusion TCGA_RNA-Seq KMT2E-LHFPL3 KMT2E chr7 104681470 + LHFPL3 chr7 104485829 + Exonic hg19 STAD TCGA-BR-8373-01A 7 17 Out-of-frame Intra-chr q22.3 q22.2 49483 ChimerSeq STARFusion TCGA_RNA-Seq ACVR1B-ANKRD33 ACVR1B chr12 52374983 + ANKRD33 chr12 52282352 + Exonic hg19 STAD TCGA-BR-8373-01A 8 6 In-Frame Intra-chr q13.13 Oncogene q13.13 Seq+ 49484 ChimerSeq STARFusion TCGA_RNA-Seq REV3L-FYN REV3L chr6 111656672 - FYN chr6 112029223 - Exonic hg19 STAD TCGA-BR-8373-01A 7 10 Out-of-frame Intra-chr q21 q21 TK:Src Seq+ 49485 ChimerSeq STARFusion TCGA_RNA-Seq ITGB5-ZNF148 ITGB5 chr3 124527869 - ZNF148 chr3 125033897 - Exonic hg19 STAD TCGA-BR-8373-01A 4 10 CDS-5'UTR Intra-chr q21.2 q21.2 Transcription factor Seq+ 49486 ChimerSeq STARFusion TCGA_RNA-Seq WWP2-NFAT5 WWP2 chr16 69876023 + NFAT5 chr16 69599432 + Exonic hg19 STAD TCGA-BR-8373-01A 4 9 CDS-5'UTR Intra-chr q22.1 q22.1 Transcription factor Seq+ 49487 ChimerSeq STARFusion TCGA_RNA-Seq GDI2-IL2RA GDI2 chr10 5827105 - IL2RA chr10 6054859 - Exonic hg19 STAD TCGA-BR-8373-01A 3 10 In-Frame Intra-chr p15.1 p15.1 Seq+ 49488 ChimerSeq STARFusion TCGA_RNA-Seq CASC3-TMEM99 CASC3 chr17 38297860 + TMEM99 chr17 38989367 + Exonic hg19 STAD TCGA-BR-A44U-01A 24 19 CDS-5'UTR Intra-chr q21.1 q21.2 Seq+ 49489 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-ORMDL3 WIPF2 chr17 38375744 + ORMDL3 chr17 38080478 - Exonic hg19 STAD TCGA-BR-A44U-01A 6 14 5'UTR-5'UTR Intra-chr q21.2 q21.1 Seq+ 49490 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-ORMDL3 WIPF2 chr17 38375744 + ORMDL3 chr17 38080473 - Exonic hg19 STAD TCGA-BR-A44U-01A 5 14 5'UTR-5'UTR Intra-chr q21.2 q21.1 Seq+ 49491 ChimerSeq STARFusion TCGA_RNA-Seq TIMM23B-LINC00843 TIMM23B chr10 51387763 + LINC00843 chr10 51732772 + Exonic hg19 STAD TCGA-VQ-A8PD-01A 25 11 Out-of-frame Intra-chr q11.23 q11.23 49492 ChimerSeq STARFusion TCGA_RNA-Seq NEDD4L-ALPK2 NEDD4L chr18 55711940 + ALPK2 chr18 56196470 - Exonic hg19 STAD TCGA-VQ-A8PD-01A 16 4 Out-of-frame Intra-chr q21.31 Tumor suppressor gene q21.32 Seq+ 49493 ChimerSeq STARFusion TCGA_RNA-Seq SAP30BP-SMIM6 SAP30BP chr17 73667943 + SMIM6 chr17 73642735 + Exonic hg19 STAD TCGA-VQ-A8PD-01A 10 4 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 49494 ChimerSeq STARFusion TCGA_RNA-Seq REG1A-DDX52 REG1A chr2 79350526 + DDX52 chr17 35985986 - Exonic hg19 STAD TCGA-BR-4267-01A 72 0 Out-of-frame Inter-chr p12 q12 49495 ChimerSeq STARFusion TCGA_RNA-Seq CLDN18-LYZ CLDN18 chr3 137750957 + LYZ chr12 69747551 + Exonic hg19 STAD TCGA-BR-4267-01A 39 50 Out-of-frame Inter-chr q22.3 q15 49496 ChimerSeq STARFusion TCGA_RNA-Seq CLDN18-LYZ CLDN18 chr3 137750984 + LYZ chr12 69747551 + Exonic hg19 STAD TCGA-BR-4267-01A 26 47 Out-of-frame Inter-chr q22.3 q15 49497 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-CLDN18 LYZ chr12 69747259 + CLDN18 chr3 137751234 + Exonic hg19 STAD TCGA-BR-4267-01A 15 27 Out-of-frame Inter-chr q15 q22.3 Seq+ 49498 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-CLDN18 LYZ chr12 69747265 + CLDN18 chr3 137751240 + Exonic hg19 STAD TCGA-BR-4267-01A 10 27 Out-of-frame Inter-chr q15 q22.3 Seq+ 49499 ChimerSeq STARFusion TCGA_RNA-Seq GBF1-AGBL1 GBF1 chr10 104019873 + AGBL1 chr15 86685235 + Exonic hg19 STAD TCGA-BR-4267-01A 15 0 CDS-5'UTR Inter-chr q24.32 q25.3 Seq+ 49500 ChimerSeq STARFusion TCGA_RNA-Seq S100A16-RPL14 S100A16 chr1 153579629 - RPL14 chr3 40503539 + Exonic hg19 STAD TCGA-BR-4267-01A 11 10 Out-of-frame Inter-chr q21.3 p22.1 49501 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-CLDN18 LYZ chr12 69747300 + CLDN18 chr3 137751227 + Exonic hg19 STAD TCGA-BR-4267-01A 4 27 Out-of-frame Inter-chr q15 q22.3 Seq+ 49502 ChimerSeq STARFusion TCGA_RNA-Seq CYB561-LYZ CYB561 chr17 61510646 - LYZ chr12 69747496 + Exonic hg19 STAD TCGA-BR-4267-01A 8 10 Out-of-frame Inter-chr q23.3 q15 49503 ChimerSeq STARFusion TCGA_RNA-Seq S100A16-RPL14 S100A16 chr1 153579629 - RPL14 chr3 40503530 + Exonic hg19 STAD TCGA-BR-4267-01A 7 7 Out-of-frame Inter-chr q21.3 p22.1 49504 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-PGC LYZ chr12 69747123 + PGC chr6 41708324 - Exonic hg19 STAD TCGA-BR-4267-01A 3 15 Out-of-frame Inter-chr q15 p21.1 49505 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-PGC LYZ chr12 69743929 + PGC chr6 41710159 - Exonic hg19 STAD TCGA-BR-4267-01A 3 15 Out-of-frame Inter-chr q15 p21.1 49506 ChimerSeq STARFusion TCGA_RNA-Seq PGC-MUC6 PGC chr6 41704516 - MUC6 chr11 1018373 - Exonic hg19 STAD TCGA-BR-4267-01A 3 14 Out-of-frame Inter-chr p21.1 49507 ChimerSeq STARFusion TCGA_RNA-Seq ZFYVE28-POLN ZFYVE28 chr4 2355660 - POLN chr4 2074756 - Exonic hg19 STAD TCGA-HF-A5NB-01A 66 18 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 49508 ChimerSeq STARFusion TCGA_RNA-Seq SDC1-PUM2 SDC1 chr2 20402848 - PUM2 chr2 20463221 - Exonic hg19 STAD TCGA-HF-A5NB-01A 36 5 In-Frame Intra-chr p24.1 p24.1 Seq+ 49509 ChimerSeq STARFusion TCGA_RNA-Seq SCAMP1-ARSB SCAMP1 chr5 77745859 + ARSB chr5 78135248 - Exonic hg19 STAD TCGA-HF-A5NB-01A 35 5 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 49510 ChimerSeq STARFusion TCGA_RNA-Seq CECR1-IGL@ CECR1 chr22 17661109 - IGL@ chr22 23241798 + Exonic hg19 STAD TCGA-VQ-A91Q-01A 1071 0 Out-of-frame Intra-chr q11.22 49511 ChimerSeq STARFusion TCGA_RNA-Seq CECR1-IGLJ2 CECR1 chr22 17661109 - IGLJ2 chr22 23241798 + Exonic hg19 STAD TCGA-VQ-A91Q-01A 1071 0 Out-of-frame Intra-chr q11.22 49512 ChimerSeq STARFusion TCGA_RNA-Seq CECR1-IGLC2 CECR1 chr22 17661109 - IGLC2 chr22 23241798 + Exonic hg19 STAD TCGA-VQ-A91Q-01A 1065 0 Out-of-frame Intra-chr q11.22 49513 ChimerSeq STARFusion TCGA_RNA-Seq RBBP4-PLCB1 RBBP4 chr1 33138502 + PLCB1 chr20 8608941 + Exonic hg19 STAD TCGA-VQ-A91Q-01A 137 21 In-Frame Inter-chr p35.1 p12.3 Seq+ 49514 ChimerSeq STARFusion TCGA_RNA-Seq DLG1-MUSK DLG1 chr3 197009550 - MUSK chr9 113457683 + Exonic hg19 STAD TCGA-VQ-A91Q-01A 80 5 Out-of-frame Inter-chr q29 Tumor suppressor gene q31.3 TK:Musk Seq+ 49515 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF3-TLL2 TM9SF3 chr10 98346491 - TLL2 chr10 98205925 - Exonic hg19 STAD TCGA-VQ-A91Q-01A 64 5 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 49516 ChimerSeq STARFusion TCGA_RNA-Seq ATXN7-ZNF385D ATXN7 chr3 63965843 + ZNF385D chr3 21478695 - Exonic hg19 STAD TCGA-R5-A7O7-01A 36 7 Out-of-frame Intra-chr p14.1 p24.3 Transcription factor Seq+ 49517 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP21-MSRB2 ARHGAP21 chr10 25010766 - MSRB2 chr10 23399171 + Exonic hg19 STAD TCGA-R5-A7O7-01A 23 13 In-Frame Intra-chr p12.1 p12.2 Seq+ 49518 ChimerSeq STARFusion TCGA_RNA-Seq TTLL4-CXCR2 TTLL4 chr2 219575760 + CXCR2 chr2 218999500 + Exonic hg19 STAD TCGA-R5-A7O7-01A 12 0 5'UTR-5'UTR Intra-chr q35 q35 Tumor suppressor gene Seq+ 49519 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF3-CTNND2 ARHGEF3 chr3 57069116 - CTNND2 chr5 11732384 - Exonic hg19 STAD TCGA-R5-A7O7-01A 9 9 Out-of-frame Inter-chr p14.3 p15.2 Seq+ 49520 ChimerSeq STARFusion TCGA_RNA-Seq CCAT1-PCAT2 CCAT1 chr8 128231055 - PCAT2 chr8 128091378 - Exonic hg19 STAD TCGA-CG-4440-01A 2 3 Out-of-frame Intra-chr q24.21 q24.21 49521 ChimerSeq STARFusion TCGA_RNA-Seq CDC123-RAB18 CDC123 chr10 12252321 + RAB18 chr10 27798804 + Exonic hg19 STAD TCGA-BR-4253-01A 4 34 Out-of-frame Intra-chr p14 p12.1 Seq+ 49522 ChimerSeq STARFusion TCGA_RNA-Seq DANCR-SERINC2 DANCR chr4 53579126 + SERINC2 chr1 31905814 + Exonic hg19 STAD TCGA-BR-4253-01A 3 8 5'UTR-CDS Inter-chr q12 p35.2 Seq+ 49523 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-WARS RCC1 chr1 28832596 + WARS chr14 100809724 - Exonic hg19 STAD TCGA-BR-4253-01A 4 1 5'UTR-CDS Inter-chr p35.3 q32.2 49524 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-WARS SNHG3 chr1 28832596 + WARS chr14 100809724 - Exonic hg19 STAD TCGA-BR-4253-01A 4 1 5'UTR-CDS Inter-chr p35.3 q32.2 49525 ChimerSeq STARFusion TCGA_RNA-Seq C3orf27-SCNM1 C3orf27 chr3 128294109 - SCNM1 chr1 151138947 + Exonic hg19 STAD TCGA-BR-4253-01A 2 0 5'UTR-5'UTR Inter-chr q21.3 49526 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-UBE2D2 SNHG3 chr1 28832596 + UBE2D2 chr5 138979957 + Exonic hg19 STAD TCGA-BR-4253-01A 2 0 5'UTR-5'UTR Inter-chr p35.3 q31.2 49527 ChimerSeq STARFusion TCGA_RNA-Seq RPSAP52-HMGA2 RPSAP52 chr12 66220623 - HMGA2 chr12 66221781 + Exonic hg19 STAD TCGA-BR-8366-01A 5 0 3'UTR-CDS Intra-chr q14.3 q14.3 Transcription factor 49528 ChimerSeq STARFusion TCGA_RNA-Seq LRRC16A-IMPG1 LRRC16A chr6 25285137 + IMPG1 chr6 76660811 - Exonic hg19 STAD TCGA-BR-8366-01A 4 3 Out-of-frame Intra-chr q14.1 49529 ChimerSeq STARFusion TCGA_RNA-Seq TMSB4X-CTSB TMSB4X chrX 12994451 + CTSB chr8 11702310 - Exonic hg19 STAD TCGA-BR-8366-01A 4 2 Out-of-frame Inter-chr p22.2 p23.1 49530 ChimerSeq STARFusion TCGA_RNA-Seq MFAP3-GALNT10 MFAP3 chr5 153529506 + GALNT10 chr5 153674376 + Exonic hg19 STAD TCGA-BR-8366-01A 4 0 3'UTR-CDS Intra-chr q33.2 q33.2 49531 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3-UBE2R2 PRSS3 chr9 33750725 + UBE2R2 chr9 33886879 + Exonic hg19 STAD TCGA-BR-8366-01A 4 0 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 49532 ChimerSeq STARFusion TCGA_RNA-Seq ATE1-POLRMT ATE1 chr10 123687505 - POLRMT chr19 633530 - Exonic hg19 STAD TCGA-BR-8366-01A 3 0 Out-of-frame Inter-chr q26.13 p13.3 49533 ChimerSeq STARFusion TCGA_RNA-Seq CTSO-DPP6 CTSO chr4 156845287 - DPP6 chr7 154685154 + Exonic hg19 STAD TCGA-BR-8366-01A 3 0 Out-of-frame Inter-chr q32.1 49534 ChimerSeq STARFusion TCGA_RNA-Seq SYN2-PPARG SYN2 chr3 12224872 + PPARG chr3 12353879 + Exonic hg19 STAD TCGA-BR-8366-01A 3 0 CDS-5'UTR Intra-chr p25.2 p25.2 Oncogene Tumor suppressor gene Transcription factor 49535 ChimerSeq STARFusion TCGA_RNA-Seq LRRC16A-IMPG1 LRRC16A chr6 25280063 + IMPG1 chr6 76660811 - Exonic hg19 STAD TCGA-BR-8366-01A 2 3 In-Frame Intra-chr q14.1 49536 ChimerSeq STARFusion TCGA_RNA-Seq LRRC16A-IMPG1 LRRC16A chr6 25285137 + IMPG1 chr6 76657250 - Exonic hg19 STAD TCGA-BR-8366-01A 2 3 In-Frame Intra-chr q14.1 49537 ChimerSeq STARFusion TCGA_RNA-Seq ATP2A2-ARPC3 ATP2A2 chr12 110734542 + ARPC3 chr12 110878193 - Exonic hg19 STAD TCGA-BR-8366-01A 2 0 In-Frame Intra-chr q24.11 q24.11 49538 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V1C1-TNFRSF11B ATP6V1C1 chr8 104033453 + TNFRSF11B chr8 119945539 - Exonic hg19 STAD TCGA-BR-8366-01A 2 0 5'UTR-CDS Intra-chr q22.3 q24.12 49539 ChimerSeq STARFusion TCGA_RNA-Seq BRAF-NUDT9 BRAF chr7 140624366 - NUDT9 chr4 88372741 + Exonic hg19 STAD TCGA-BR-8366-01A 2 0 In-Frame Inter-chr q34 TKL:RAF Oncogene q22.1 49540 ChimerSeq STARFusion TCGA_RNA-Seq CCNI-VPS54 CCNI chr4 77977115 - VPS54 chr2 64193100 - Exonic hg19 STAD TCGA-BR-8366-01A 2 0 In-Frame Inter-chr q21.1 p14 49541 ChimerSeq STARFusion TCGA_RNA-Seq CLDN12-IGF2BP2 CLDN12 chr7 90034922 + IGF2BP2 chr3 185390457 - Exonic hg19 STAD TCGA-BR-8366-01A 2 0 5'UTR-CDS Inter-chr q21.13 q27.2 49542 ChimerSeq STARFusion TCGA_RNA-Seq DHX15-HGSNAT DHX15 chr4 24556348 - HGSNAT chr8 43033217 + Exonic hg19 STAD TCGA-BR-8366-01A 2 0 Out-of-frame Inter-chr p15.2 p11.21 49543 ChimerSeq STARFusion TCGA_RNA-Seq DOPEY1-CYB5R4 DOPEY1 chr6 83777498 + CYB5R4 chr6 84665017 + Exonic hg19 STAD TCGA-BR-8366-01A 2 0 5'UTR-CDS Intra-chr q14.1 q14.2 Seq+ 49544 ChimerSeq STARFusion TCGA_RNA-Seq FA2H-NDUFS6 FA2H chr16 74808384 - NDUFS6 chr5 1814453 + Exonic hg19 STAD TCGA-BR-8366-01A 2 0 In-Frame Inter-chr q23.1 p15.33 49545 ChimerSeq STARFusion TCGA_RNA-Seq FILIP1-ATG5 FILIP1 chr6 76203130 - ATG5 chr6 106740981 - Exonic hg19 STAD TCGA-BR-8366-01A 2 0 5'UTR-CDS Intra-chr q14.1 q21 49546 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3B-MBNL1 FNDC3B chr3 171851336 + MBNL1 chr3 152132730 + Exonic hg19 STAD TCGA-BR-8366-01A 2 0 Out-of-frame Intra-chr q26.31 q25.1 49547 ChimerSeq STARFusion TCGA_RNA-Seq GLI2-SULF1 GLI2 chr2 121493861 + SULF1 chr8 70570740 + Exonic hg19 STAD TCGA-BR-8366-01A 2 0 5'UTR-CDS Inter-chr q14.2 Transcription factor q13.2 49548 ChimerSeq STARFusion TCGA_RNA-Seq GNL2-SPINT1 GNL2 chr1 38041196 - SPINT1 chr15 41148968 + Exonic hg19 STAD TCGA-BR-8366-01A 2 0 Out-of-frame Inter-chr p34.3 q15.1 49549 ChimerSeq STARFusion TCGA_RNA-Seq GOLPH3-CMIP GOLPH3 chr5 32173916 - CMIP chr16 81641172 + Exonic hg19 STAD TCGA-BR-8366-01A 2 0 In-Frame Inter-chr p13.3 q23.2 49550 ChimerSeq STARFusion TCGA_RNA-Seq HCP5-YBX1 HCP5 chr6 31368540 + YBX1 chr1 43166452 + Exonic hg19 STAD TCGA-BR-8366-01A 2 0 5'UTR-CDS Inter-chr p21.33 p34.2 Transcription factor 49551 ChimerSeq STARFusion TCGA_RNA-Seq KDM2B-TXNL1 KDM2B chr12 121877660 - TXNL1 chr18 54293688 - Exonic hg19 STAD TCGA-BR-8366-01A 2 0 Out-of-frame Inter-chr q24.31 Transcription factor q21.31 49552 ChimerSeq STARFusion TCGA_RNA-Seq KLHL24-WARS KLHL24 chr3 183361330 + WARS chr14 100809724 - Exonic hg19 STAD TCGA-BR-8366-01A 2 0 5'UTR-CDS Inter-chr q27.1 q32.2 49553 ChimerSeq STARFusion TCGA_RNA-Seq MAPK4-PQLC1 MAPK4 chr18 48086613 + PQLC1 chr18 77664183 - Exonic hg19 STAD TCGA-BR-8366-01A 2 0 5'UTR-CDS Intra-chr q21.1 q23 49554 ChimerSeq STARFusion TCGA_RNA-Seq MBNL1-RPIA MBNL1 chr3 152165562 + RPIA chr2 89049498 + Exonic hg19 STAD TCGA-BR-8366-01A 2 0 In-Frame Inter-chr q25.1 p11.2 49555 ChimerSeq STARFusion TCGA_RNA-Seq MEF2A-SNX27 MEF2A chr15 100173378 + SNX27 chr1 151630711 + Exonic hg19 STAD TCGA-BR-8366-01A 2 0 In-Frame Inter-chr q26.3 Transcription factor q21.3 Seq+ 49556 ChimerSeq STARFusion TCGA_RNA-Seq MLLT10-ABI1 MLLT10 chr10 21827841 + ABI1 chr10 27112234 - Exonic hg19 STAD TCGA-BR-8366-01A 2 0 In-Frame Intra-chr p12.31 Oncogene p12.1 49557 ChimerSeq STARFusion TCGA_RNA-Seq NEO1-PML NEO1 chr15 73345146 + PML chr15 74315169 + Exonic hg19 STAD TCGA-BR-8366-01A 2 0 Out-of-frame Intra-chr q24.1 q24.1 Oncogene Tumor suppressor gene 49558 ChimerSeq STARFusion TCGA_RNA-Seq NUPL2-CHD8 NUPL2 chr7 23226765 + CHD8 chr14 21854335 - Exonic hg19 STAD TCGA-BR-8366-01A 2 0 Out-of-frame Inter-chr p15.3 q11.2 49559 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD1-MTM1 PCMTD1 chr8 52811490 - MTM1 chrX 149807416 + Exonic hg19 STAD TCGA-BR-8366-01A 2 0 5'UTR-CDS Inter-chr q11.23 q28 49560 ChimerSeq STARFusion TCGA_RNA-Seq PHTF2-RSBN1L PHTF2 chr7 77428288 + RSBN1L chr7 77365727 + Exonic hg19 STAD TCGA-BR-8366-01A 2 0 5'UTR-CDS Intra-chr q11.23 q11.23 Seq+ 49561 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R5C-TRAF3IP3 PPP2R5C chr14 102323222 + TRAF3IP3 chr1 209950697 + Exonic hg19 STAD TCGA-BR-8366-01A 2 0 In-Frame Inter-chr q32.31 Tumor suppressor gene q32.2 49562 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R2-SNRPD2 PPP6R2 chr22 50810579 + SNRPD2 chr19 46191824 - Exonic hg19 STAD TCGA-BR-8366-01A 2 0 5'UTR-5'UTR Inter-chr q13.33 q13.32 49563 ChimerSeq STARFusion TCGA_RNA-Seq PRKCB-ZNRF1 PRKCB chr16 23848727 + ZNRF1 chr16 75138682 + Exonic hg19 STAD TCGA-BR-8366-01A 2 0 In-Frame Intra-chr p12.2 Tumor suppressor gene q23.1 49564 ChimerSeq STARFusion TCGA_RNA-Seq PRSS16-ENO1 PRSS16 chr6 27219280 + ENO1 chr1 8930569 - Exonic hg19 STAD TCGA-BR-8366-01A 2 0 Out-of-frame Inter-chr p22.1 p36.23 49565 ChimerSeq STARFusion TCGA_RNA-Seq PVRL3-CBLB PVRL3 chr3 110791024 + CBLB chr3 105572508 - Exonic hg19 STAD TCGA-BR-8366-01A 2 0 Out-of-frame Intra-chr q13.11 49566 ChimerSeq STARFusion TCGA_RNA-Seq RAD51D-TBC1D2 RAD51D chr17 33445520 - TBC1D2 chr9 100965690 - Exonic hg19 STAD TCGA-BR-8366-01A 2 0 In-Frame Inter-chr q12 q22.33 49567 ChimerSeq STARFusion TCGA_RNA-Seq SHQ1-SRSF11 SHQ1 chr3 72842067 - SRSF11 chr1 70694105 + Exonic hg19 STAD TCGA-BR-8366-01A 2 0 In-Frame Inter-chr p13 Tumor suppressor gene p31.1 49568 ChimerSeq STARFusion TCGA_RNA-Seq SIK2-FAM193A SIK2 chr11 111473422 + FAM193A chr4 2717750 + Exonic hg19 STAD TCGA-BR-8366-01A 2 0 Out-of-frame Inter-chr q23.1 p16.3 49569 ChimerSeq STARFusion TCGA_RNA-Seq SMIM14-HP1BP3 SMIM14 chr4 39606691 - HP1BP3 chr1 21100103 - Exonic hg19 STAD TCGA-BR-8366-01A 2 0 Out-of-frame Inter-chr p14 p36.12 49570 ChimerSeq STARFusion TCGA_RNA-Seq SMYD3-KIF26B SMYD3 chr1 245927343 - KIF26B chr1 245704069 + Exonic hg19 STAD TCGA-BR-8366-01A 2 0 Out-of-frame Intra-chr q44 Transcription factor 49571 ChimerSeq STARFusion TCGA_RNA-Seq SP3-WIPF1 SP3 chr2 174819601 - WIPF1 chr2 175450339 - Exonic hg19 STAD TCGA-BR-8366-01A 2 0 CDS-5'UTR Intra-chr q31.1 Transcription factor q31.1 49572 ChimerSeq STARFusion TCGA_RNA-Seq TFEC-CHCHD3 TFEC chr7 115750762 - CHCHD3 chr7 132523229 - Exonic hg19 STAD TCGA-BR-8366-01A 2 0 5'UTR-CDS Intra-chr q31.2 Transcription factor q33 Transcription factor 49573 ChimerSeq STARFusion TCGA_RNA-Seq USP48-EIF4G3 USP48 chr1 22109317 - EIF4G3 chr1 21415706 - Exonic hg19 STAD TCGA-BR-8366-01A 2 0 CDS-5'UTR Intra-chr p36.12 p36.12 49574 ChimerSeq STARFusion TCGA_RNA-Seq CD44-SLC1A2 CD44 chr11 35243279 + SLC1A2 chr11 35339063 - Exonic hg19 STAD TCGA-B7-5818-01A 52 1 In-Frame Intra-chr p13 Oncogene Tumor suppressor gene p13 KB Pub Seq+ 49575 ChimerSeq STARFusion TCGA_RNA-Seq RSF1-CLNS1A RSF1 chr11 77531574 - CLNS1A chr11 77336863 - Exonic hg19 STAD TCGA-B7-5818-01A 8 0 In-Frame Intra-chr q14.1 q14.1 Seq+ 49576 ChimerSeq STARFusion TCGA_RNA-Seq SSBP3-AR SSBP3 chr1 54871734 - AR chrX 66766373 + Exonic hg19 STAD TCGA-B7-5818-01A 5 0 Out-of-frame Inter-chr p32.3 q12 Oncogene Tumor suppressor gene Transcription factor 49577 ChimerSeq STARFusion TCGA_RNA-Seq COX7C-HNRNPK COX7C chr5 85913937 + HNRNPK chr9 86586613 - Exonic hg19 STAD TCGA-B7-5818-01A 3 0 Out-of-frame Inter-chr q14.3 q21.32 49578 ChimerSeq STARFusion TCGA_RNA-Seq GTF2E2-DNASE2 GTF2E2 chr8 30436371 - DNASE2 chr19 12992143 - Exonic hg19 STAD TCGA-B7-5818-01A 3 0 Out-of-frame Inter-chr p12 p13.13 49579 ChimerSeq STARFusion TCGA_RNA-Seq HEG1-ZNF550 HEG1 chr3 124739847 - ZNF550 chr19 58067635 - Exonic hg19 STAD TCGA-B7-5818-01A 3 0 Out-of-frame Inter-chr q21.2 q13.43 Transcription factor 49580 ChimerSeq STARFusion TCGA_RNA-Seq LINC00482-MAP2K2 LINC00482 chr17 79282985 - MAP2K2 chr19 4099412 - Exonic hg19 STAD TCGA-B7-5818-01A 3 0 3'UTR-CDS Inter-chr q25.3 p13.3 STE:STE7 Oncogene 49581 ChimerSeq STARFusion TCGA_RNA-Seq P4HB-GPRC5A P4HB chr17 79801932 - GPRC5A chr12 13061556 + Exonic hg19 STAD TCGA-B7-5818-01A 3 0 Out-of-frame Inter-chr q25.3 p13.1 Tumor suppressor gene 49582 ChimerSeq STARFusion TCGA_RNA-Seq POMGNT1-P4HB POMGNT1 chr1 46655553 - P4HB chr17 79801968 - Exonic hg19 STAD TCGA-B7-5818-01A 3 0 In-Frame Inter-chr p34.1 q25.3 49583 ChimerSeq STARFusion TCGA_RNA-Seq PTH2R-COL1A1 PTH2R chr2 209719064 + COL1A1 chr17 48278992 - Exonic hg19 STAD TCGA-B7-5818-01A 3 0 Out-of-frame Inter-chr q34 q21.33 Oncogene 49584 ChimerSeq STARFusion TCGA_RNA-Seq SMEK1-HSPA5 SMEK1 chr14 91976555 - HSPA5 chr9 128000899 - Exonic hg19 STAD TCGA-B7-5818-01A 3 0 Out-of-frame Inter-chr q33.3 49585 ChimerSeq STARFusion TCGA_RNA-Seq STRADA-FLVCR1 STRADA chr17 61819101 - FLVCR1 chr1 213037067 + Exonic hg19 STAD TCGA-B7-5818-01A 3 0 5'UTR-CDS Inter-chr q23.3 Tumor suppressor gene q32.3 Seq+ 49586 ChimerSeq STARFusion TCGA_RNA-Seq ADARB1-MTOR ADARB1 chr21 46494708 + MTOR chr1 11227574 - Exonic hg19 STAD TCGA-B7-5818-01A 2 0 5'UTR-CDS Inter-chr q22.3 Tumor suppressor gene p36.22 Oncogene 49587 ChimerSeq STARFusion TCGA_RNA-Seq APOL2-HSPH1 APOL2 chr22 36635487 - HSPH1 chr13 31729791 - Exonic hg19 STAD TCGA-B7-5818-01A 2 0 5'UTR-CDS Inter-chr q12.3 q12.3 49588 ChimerSeq STARFusion TCGA_RNA-Seq ARAP1-CALHM2 ARAP1 chr11 72432895 - CALHM2 chr10 105207325 - Exonic hg19 STAD TCGA-B7-5818-01A 2 0 5'UTR-CDS Inter-chr q13.4 q24.33 49589 ChimerSeq STARFusion TCGA_RNA-Seq ATP13A4-TAOK3 ATP13A4 chr3 193272529 - TAOK3 chr12 118651915 - Exonic hg19 STAD TCGA-B7-5818-01A 2 0 Out-of-frame Inter-chr q29 q24.23 49590 ChimerSeq STARFusion TCGA_RNA-Seq CDC42BPA-ZNF678 CDC42BPA chr1 227504706 - ZNF678 chr1 227842037 + Exonic hg19 STAD TCGA-B7-5818-01A 2 0 In-Frame Intra-chr q42.13 q42.13 Transcription factor Seq+ 49591 ChimerSeq STARFusion TCGA_RNA-Seq CEPT1-LARP4B CEPT1 chr1 111682929 + LARP4B chr10 931700 - Exonic hg19 STAD TCGA-B7-5818-01A 2 0 5'UTR-5'UTR Inter-chr p13.3 p15.3 49592 ChimerSeq STARFusion TCGA_RNA-Seq ETNK1-TSPAN13 ETNK1 chr12 22778520 + TSPAN13 chr7 16815836 + Exonic hg19 STAD TCGA-B7-5818-01A 2 0 In-Frame Inter-chr p12.1 p21.1 Tumor suppressor gene 49593 ChimerSeq STARFusion TCGA_RNA-Seq FAM110A-RNF24 FAM110A chr20 814594 + RNF24 chr20 3944671 - Exonic hg19 STAD TCGA-B7-5818-01A 2 0 5'UTR-5'UTR Intra-chr p13 p13 49594 ChimerSeq STARFusion TCGA_RNA-Seq GRIPAP1-AP1M2 GRIPAP1 chrX 48834717 - AP1M2 chr19 10694746 - Exonic hg19 STAD TCGA-B7-5818-01A 2 0 In-Frame Inter-chr p11.23 p13.2 49595 ChimerSeq STARFusion TCGA_RNA-Seq MCU-PSAP MCU chr10 74475660 + PSAP chr10 73594262 - Exonic hg19 STAD TCGA-B7-5818-01A 2 0 Out-of-frame Intra-chr q22.1 q22.1 49596 ChimerSeq STARFusion TCGA_RNA-Seq MFSD3-SRRM2 MFSD3 chr8 145736286 + SRRM2 chr16 2807782 + Exonic hg19 STAD TCGA-B7-5818-01A 2 0 Out-of-frame Inter-chr q24.3 p13.3 49597 ChimerSeq STARFusion TCGA_RNA-Seq PSMD8-JUP PSMD8 chr19 38865601 + JUP chr17 39914036 - Exonic hg19 STAD TCGA-B7-5818-01A 2 0 In-Frame Inter-chr q13.2 q21.2 Tumor suppressor gene 49598 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-CC2D2A RCC1 chr1 28834672 + CC2D2A chr4 15482328 + Exonic hg19 STAD TCGA-B7-5818-01A 2 0 5'UTR-CDS Inter-chr p35.3 p15.32 49599 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-NT5C2 RCC1 chr1 28834672 + NT5C2 chr10 104861083 - Exonic hg19 STAD TCGA-B7-5818-01A 2 0 5'UTR-CDS Inter-chr p35.3 q24.33 49600 ChimerSeq STARFusion TCGA_RNA-Seq RSF1-CLNS1A RSF1 chr11 77531574 - CLNS1A chr11 77336115 - Exonic hg19 STAD TCGA-B7-5818-01A 2 0 In-Frame Intra-chr q14.1 q14.1 Seq+ 49601 ChimerSeq STARFusion TCGA_RNA-Seq SEC22C-RBBP8 SEC22C chr3 42610357 - RBBP8 chr18 20526407 + Exonic hg19 STAD TCGA-B7-5818-01A 2 0 Out-of-frame Inter-chr p22.1 q11.2 Tumor suppressor gene 49602 ChimerSeq STARFusion TCGA_RNA-Seq SH3RF1-LSM6 SH3RF1 chr4 170189971 - LSM6 chr4 147104064 + Exonic hg19 STAD TCGA-B7-5818-01A 2 0 CDS-5'UTR Intra-chr q33 q31.22 49603 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L3-ADD3 SIPA1L3 chr19 38519796 + ADD3 chr10 111860383 + Exonic hg19 STAD TCGA-B7-5818-01A 2 0 5'UTR-5'UTR Inter-chr q13.13 q25.1 49604 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-CC2D2A SNHG3 chr1 28834672 + CC2D2A chr4 15482328 + Exonic hg19 STAD TCGA-B7-5818-01A 2 0 5'UTR-CDS Inter-chr p35.3 p15.32 49605 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-NT5C2 SNHG3 chr1 28834672 + NT5C2 chr10 104861083 - Exonic hg19 STAD TCGA-B7-5818-01A 2 0 5'UTR-CDS Inter-chr p35.3 q24.33 49606 ChimerSeq STARFusion TCGA_RNA-Seq SPOP-ATF7 SPOP chr17 47753257 - ATF7 chr12 53946421 - Exonic hg19 STAD TCGA-B7-5818-01A 2 0 5'UTR-CDS Inter-chr q21.33 Oncogene Tumor suppressor gene q13.13 Transcription factor 49607 ChimerSeq STARFusion TCGA_RNA-Seq SRPK1-SNRPC SRPK1 chr6 35888245 - SNRPC chr6 34738068 + Exonic hg19 STAD TCGA-B7-5818-01A 2 0 Out-of-frame Intra-chr p21.31 CMGC:SRPK p21.31 49608 ChimerSeq STARFusion TCGA_RNA-Seq SUGP2-FAM227B SUGP2 chr19 19119126 - FAM227B chr15 49869042 - Exonic hg19 STAD TCGA-B7-5818-01A 2 0 Out-of-frame Inter-chr p13.11 q21.2 49609 ChimerSeq STARFusion TCGA_RNA-Seq USP47-SFPQ USP47 chr11 11863771 + SFPQ chr1 35643637 - Exonic hg19 STAD TCGA-B7-5818-01A 2 0 CDS-3'UTR Inter-chr p15.3 p34.3 49610 ChimerSeq STARFusion TCGA_RNA-Seq BZW2-GAP43 BZW2 chr7 16685913 + GAP43 chr3 115439641 + Exonic hg19 STAD TCGA-RD-A7C1-01A 20 8 5'UTR-CDS Inter-chr p21.1 q13.31 Seq+ 49611 ChimerSeq STARFusion TCGA_RNA-Seq BZW2-GAP43 BZW2 chr7 16685929 + GAP43 chr3 115439641 + Exonic hg19 STAD TCGA-RD-A7C1-01A 9 8 5'UTR-CDS Inter-chr p21.1 q13.31 Seq+ 49612 ChimerSeq STARFusion TCGA_RNA-Seq MUC5AC-HMG20B MUC5AC chr11 1213137 + HMG20B chr19 3578735 + Exonic hg19 STAD TCGA-VQ-A94T-01A 312 1 Out-of-frame Inter-chr p13.3 Transcription factor 49613 ChimerSeq STARFusion TCGA_RNA-Seq MUC5AC-HMG20B MUC5AC chr11 1212993 + HMG20B chr19 3578735 + Exonic hg19 STAD TCGA-VQ-A94T-01A 52 1 Out-of-frame Inter-chr p13.3 Transcription factor 49614 ChimerSeq STARFusion TCGA_RNA-Seq LRP5-CHKA LRP5 chr11 68080273 + CHKA chr11 67842297 - Exonic hg19 STAD TCGA-VQ-A94T-01A 16 1 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 49615 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-MARK2 PPP6R3 chr11 68343511 + MARK2 chr11 63662631 + Exonic hg19 STAD TCGA-BR-6802-01A 19 0 In-Frame Intra-chr q13.2 q13.1 CAMK:CAMKL Seq+ 49616 ChimerSeq STARFusion TCGA_RNA-Seq CLIC4-NCMAP CLIC4 chr1 25072116 + NCMAP chr1 24927431 + Exonic hg19 STAD TCGA-HU-8610-01A 27 21 Out-of-frame Intra-chr p36.11 p36.11 49617 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142471340 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-HU-8610-01A 19 0 3'UTR-CDS Inter-chr q13.41 49618 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142460418 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-HU-8610-01A 19 0 In-Frame Inter-chr q13.41 49619 ChimerSeq STARFusion TCGA_RNA-Seq N4BP1-IGH@ N4BP1 chr16 48637578 - IGH@ chr14 106330468 - Exonic hg19 STAD TCGA-HU-8610-01A 16 1 Out-of-frame Inter-chr q12.1 32.33 49620 ChimerSeq STARFusion TCGA_RNA-Seq N4BP1-IGHG3 N4BP1 chr16 48637580 - IGHG3 chr14 106330470 - Exonic hg19 STAD TCGA-HU-8610-01A 16 1 Out-of-frame Inter-chr q12.1 49621 ChimerSeq STARFusion TCGA_RNA-Seq PARG-BMS1 PARG chr10 51093249 - BMS1 chr10 43287075 + Exonic hg19 STAD TCGA-HU-8610-01A 11 11 In-Frame Intra-chr q11.23 q11.21 49622 ChimerSeq STARFusion TCGA_RNA-Seq CLK2-PPP1R12B CLK2 chr1 155242992 - PPP1R12B chr1 202457661 + Exonic hg19 STAD TCGA-HU-8610-01A 9 9 5'UTR-5'UTR Intra-chr q22 CMGC:CLK q32.1 Seq+ 49623 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P1-KLK6 PRSS3P1 chr7 142481912 + KLK6 chr19 51462572 - Exonic hg19 STAD TCGA-HU-8610-01A 11 1 Out-of-frame Inter-chr q13.41 Tumor suppressor gene 49624 ChimerSeq STARFusion TCGA_RNA-Seq COL1A1-SPARC COL1A1 chr17 48266530 - SPARC chr5 151051149 - Exonic hg19 STAD TCGA-HU-8610-01A 3 9 Out-of-frame Inter-chr q21.33 Oncogene q33.1 Tumor suppressor gene 49625 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL2-TNFAIP2 RN7SL2 chr14 50329518 - TNFAIP2 chr14 103602903 + Exonic hg19 STAD TCGA-HU-8610-01A 4 4 Out-of-frame Intra-chr q21.3 q32.32 49626 ChimerSeq STARFusion TCGA_RNA-Seq DYRK1A-PKNOX1 DYRK1A chr21 38739930 + PKNOX1 chr21 44424436 + Exonic hg19 STAD TCGA-BR-6803-01A 13 2 5'UTR-5'UTR Intra-chr q22.13 CMGC:DYRK q22.3 Tumor suppressor gene Transcription factor Seq+ 49627 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-DLGAP4 EPB41L1 chr20 34700402 + DLGAP4 chr20 34995448 + Exonic hg19 STAD TCGA-CG-4476-01A 3 16 5'UTR-5'UTR Intra-chr q11.23 q11.23 49628 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125718 - CXCL16 chr17 4637332 - Exonic hg19 STAD TCGA-CG-4476-01A 6 3 Out-of-frame Inter-chr q12.2 p13.2 49629 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125699 - CXCL16 chr17 4637313 - Exonic hg19 STAD TCGA-CG-4476-01A 4 3 Out-of-frame Inter-chr q12.2 p13.2 49630 ChimerSeq STARFusion TCGA_RNA-Seq UBE2V1-TSHZ2 UBE2V1 chr20 48729644 - TSHZ2 chr20 52103683 + Exonic hg19 STAD TCGA-CG-4476-01A 2 7 3'UTR-3'UTR Intra-chr q13.13 q13.2 Transcription factor Seq+ 49631 ChimerSeq STARFusion TCGA_RNA-Seq TMED3-KIAA1024 TMED3 chr15 79606347 + KIAA1024 chr15 79748440 + Exonic hg19 STAD TCGA-CG-4476-01A 2 1 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 49632 ChimerSeq STARFusion TCGA_RNA-Seq COG8-TERF2 COG8 chr16 69373079 - TERF2 chr16 69391464 - Exonic hg19 STAD TCGA-BR-A4IZ-01A 67 21 Out-of-frame Intra-chr q22.1 q22.1 Transcription factor Seq+ 49633 ChimerSeq STARFusion TCGA_RNA-Seq COG8-TERF2 COG8 chr16 69373079 - TERF2 chr16 69391461 - Exonic hg19 STAD TCGA-BR-A4IZ-01A 22 21 Out-of-frame Intra-chr q22.1 q22.1 Transcription factor Seq+ 49634 ChimerSeq STARFusion TCGA_RNA-Seq CDC6-JUP CDC6 chr17 38457860 + JUP chr17 39914036 - Exonic hg19 STAD TCGA-BR-8364-01A 5 0 3'UTR-CDS Intra-chr q21.2 q21.2 Tumor suppressor gene Seq+ 49635 ChimerSeq STARFusion TCGA_RNA-Seq QRICH1-FBXW12 QRICH1 chr3 49114142 - FBXW12 chr3 48415038 + Exonic hg19 STAD TCGA-BR-8364-01A 4 2 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 49636 ChimerSeq STARFusion TCGA_RNA-Seq LRRC8D-GOLGA4 LRRC8D chr1 90309341 + GOLGA4 chr3 37292886 + Exonic hg19 STAD TCGA-BR-8364-01A 4 1 5'UTR-CDS Inter-chr p22.2 p22.2 49637 ChimerSeq STARFusion TCGA_RNA-Seq GPN1-CCNT2 GPN1 chr2 27862992 + CCNT2 chr2 135694411 + Exonic hg19 STAD TCGA-BR-8364-01A 3 1 Out-of-frame Intra-chr p23.3 q21.3 49638 ChimerSeq STARFusion TCGA_RNA-Seq CCDC85A-GPN1 CCDC85A chr2 56420575 + GPN1 chr2 27857713 + Exonic hg19 STAD TCGA-BR-8364-01A 3 0 Out-of-frame Intra-chr p16.1 p23.3 49639 ChimerSeq STARFusion TCGA_RNA-Seq CCDC85A-ZNF512 CCDC85A chr2 56420575 + ZNF512 chr2 27857713 + Exonic hg19 STAD TCGA-BR-8364-01A 3 0 CDS-3'UTR Intra-chr p16.1 p23.3 Transcription factor 49640 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC14-COA3 DNAJC14 chr12 56223297 - COA3 chr17 40950715 - Exonic hg19 STAD TCGA-BR-8364-01A 3 0 Out-of-frame Inter-chr q13.2 q21.2 49641 ChimerSeq STARFusion TCGA_RNA-Seq LSR-ACTG1 LSR chr19 35741299 + ACTG1 chr17 79478451 - Exonic hg19 STAD TCGA-BR-8364-01A 3 0 Out-of-frame Inter-chr q13.12 q25.3 49642 ChimerSeq STARFusion TCGA_RNA-Seq MFAP3-GALNT10 MFAP3 chr5 153529506 + GALNT10 chr5 153674376 + Exonic hg19 STAD TCGA-BR-8364-01A 3 0 3'UTR-CDS Intra-chr q33.2 q33.2 49643 ChimerSeq STARFusion TCGA_RNA-Seq MMS22L-FTL MMS22L chr6 97593514 - FTL chr19 49469048 + Exonic hg19 STAD TCGA-BR-8364-01A 3 0 Out-of-frame Inter-chr q16.1 q13.33 49644 ChimerSeq STARFusion TCGA_RNA-Seq PCSK6-FAM104A PCSK6 chr15 102029579 - FAM104A chr17 71205811 - Exonic hg19 STAD TCGA-BR-8364-01A 3 0 Out-of-frame Inter-chr q26.3 q25.1 49645 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL1-ADCY9 RN7SL1 chr14 50053471 + ADCY9 chr16 4033924 - Exonic hg19 STAD TCGA-BR-8364-01A 3 0 Out-of-frame Inter-chr q21.3 p13.3 49646 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L1-COX16 SIPA1L1 chr14 71787898 + COX16 chr14 70795953 - Exonic hg19 STAD TCGA-BR-8364-01A 3 0 5'UTR-CDS Intra-chr q24.2 q24.2 49647 ChimerSeq STARFusion TCGA_RNA-Seq SMIM14-TRAPPC2 SMIM14 chr4 39552809 - TRAPPC2 chrX 13731705 - Exonic hg19 STAD TCGA-BR-8364-01A 3 0 Out-of-frame Inter-chr p14 p22.2 49648 ChimerSeq STARFusion TCGA_RNA-Seq C8orf87-TRIQK C8orf87 chr8 94146973 - TRIQK chr8 93966792 - Exonic hg19 STAD TCGA-BR-8364-01A 2 2 CDS-5'UTR Intra-chr q22.1 q22.1 49649 ChimerSeq STARFusion TCGA_RNA-Seq BAG2-PRIM2 BAG2 chr6 57037608 + PRIM2 chr6 57183235 + Exonic hg19 STAD TCGA-BR-8364-01A 2 1 CDS-5'UTR Intra-chr p12.1 p11.2 Seq+ 49650 ChimerSeq STARFusion TCGA_RNA-Seq ABCB7-SH3BGRL ABCB7 chrX 74375940 - SH3BGRL chrX 80532483 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 In-Frame Intra-chr q13.3 q21.1 49651 ChimerSeq STARFusion TCGA_RNA-Seq ABLIM2-SH3TC1 ABLIM2 chr4 8160407 - SH3TC1 chr4 8233703 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 In-Frame Intra-chr p16.1 p16.1 49652 ChimerSeq STARFusion TCGA_RNA-Seq ADRBK1-BANP ADRBK1 chr11 67034283 + BANP chr16 88105675 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 Out-of-frame Inter-chr q24.2 Tumor suppressor gene 49653 ChimerSeq STARFusion TCGA_RNA-Seq APPBP2-WIPI1 APPBP2 chr17 58577760 - WIPI1 chr17 66423394 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 In-Frame Intra-chr q23.2 q24.2 49654 ChimerSeq STARFusion TCGA_RNA-Seq ARPC1B-SYNC ARPC1B chr7 98972404 + SYNC chr1 33161645 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-CDS Inter-chr q22.1 p35.1 49655 ChimerSeq STARFusion TCGA_RNA-Seq BBX-C3orf58 BBX chr3 107364756 + C3orf58 chr3 143704385 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-CDS Intra-chr q13.12 Transcription factor q24 49656 ChimerSeq STARFusion TCGA_RNA-Seq BCLAF1-MAP7 BCLAF1 chr6 136610851 - MAP7 chr6 136742937 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-5'UTR Intra-chr q23.3 q23.3 Seq+ 49657 ChimerSeq STARFusion TCGA_RNA-Seq C12orf76-GPX2 C12orf76 chr12 110486168 - GPX2 chr14 65406556 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 CDS-3'UTR Inter-chr q24.11 q23.3 49658 ChimerSeq STARFusion TCGA_RNA-Seq C17orf80-MAPK14 C17orf80 chr17 71229464 + MAPK14 chr6 36070348 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-CDS Inter-chr q25.1 p21.31 49659 ChimerSeq STARFusion TCGA_RNA-Seq CCDC129-UBE3C CCDC129 chr7 31553819 + UBE3C chr7 156956504 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-CDS Intra-chr p14.3 q36.3 49660 ChimerSeq STARFusion TCGA_RNA-Seq CCDC82-ZNF783 CCDC82 chr11 96123008 - ZNF783 chr7 148984656 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-3'UTR Inter-chr q21 q36.1 Transcription factor 49661 ChimerSeq STARFusion TCGA_RNA-Seq CDKAL1-MBNL1 CDKAL1 chr6 20846409 + MBNL1 chr3 152132730 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 Out-of-frame Inter-chr p22.3 q25.1 49662 ChimerSeq STARFusion TCGA_RNA-Seq CFI-TMA16 CFI chr4 110723071 - TMA16 chr4 164428185 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 In-Frame Intra-chr q25 q32.2 49663 ChimerSeq STARFusion TCGA_RNA-Seq CLIP1-TMED2 CLIP1 chr12 122861936 - TMED2 chr12 124081152 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 Out-of-frame Intra-chr q24.31 q24.31 49664 ChimerSeq STARFusion TCGA_RNA-Seq CNOT1-ATXN2 CNOT1 chr16 58608513 - ATXN2 chr12 111993723 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 In-Frame Inter-chr q21 q24.12 49665 ChimerSeq STARFusion TCGA_RNA-Seq CNOT8-CPE CNOT8 chr5 154238328 + CPE chr4 166385542 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-CDS Inter-chr q33.2 q32.3 49666 ChimerSeq STARFusion TCGA_RNA-Seq CYB5R4-KIAA1009 CYB5R4 chr6 84574047 + KIAA1009 chr6 84836231 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 Out-of-frame Intra-chr q14.2 Seq+ 49667 ChimerSeq STARFusion TCGA_RNA-Seq DDIT4-PTPRM DDIT4 chr10 74033818 + PTPRM chr18 8378263 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-CDS Inter-chr q22.1 p11.23 49668 ChimerSeq STARFusion TCGA_RNA-Seq DDX39A-NFIX DDX39A chr19 14530082 - NFIX chr19 13201113 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-CDS Intra-chr p13.12 p13.13 Transcription factor 49669 ChimerSeq STARFusion TCGA_RNA-Seq DNAH12-QRICH1 DNAH12 chr3 57386113 - QRICH1 chr3 49114471 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 CDS-5'UTR Intra-chr p14.3 p21.31 49670 ChimerSeq STARFusion TCGA_RNA-Seq DNAL4-MAPK8IP3 DNAL4 chr22 39190073 - MAPK8IP3 chr16 1797030 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-CDS Inter-chr q13.1 p13.3 49671 ChimerSeq STARFusion TCGA_RNA-Seq DST-ZNF451 DST chr6 56707853 - ZNF451 chr6 57006100 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-CDS Intra-chr p12.1 Oncogene p12.1 Transcription factor 49672 ChimerSeq STARFusion TCGA_RNA-Seq ELMSAN1-PTEN ELMSAN1 chr14 74253805 - PTEN chr10 89685270 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 Out-of-frame Inter-chr q24.3 q23.31 Oncogene Tumor suppressor gene 49673 ChimerSeq STARFusion TCGA_RNA-Seq EMC2-SCAF4 EMC2 chr8 109455927 + SCAF4 chr21 33044667 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 Out-of-frame Inter-chr q23.1 q22.11 49674 ChimerSeq STARFusion TCGA_RNA-Seq ERAP1-DST ERAP1 chr5 96143563 - DST chr6 56368896 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-CDS Inter-chr q15 p12.1 Oncogene 49675 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-ZNF207 FAM222B chr17 27169700 - ZNF207 chr17 30696314 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-CDS Intra-chr q11.2 q11.2 Transcription factor 49676 ChimerSeq STARFusion TCGA_RNA-Seq FRMD4B-ERI3 FRMD4B chr3 69591357 - ERI3 chr1 44804994 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-CDS Inter-chr p14.1 p34.1 49677 ChimerSeq STARFusion TCGA_RNA-Seq GOLT1B-DNM1L GOLT1B chr12 21659910 + DNM1L chr12 32875361 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 Out-of-frame Intra-chr p12.1 p11.21 49678 ChimerSeq STARFusion TCGA_RNA-Seq HDHD1-SHROOM2 HDHD1 chrX 6995261 - SHROOM2 chrX 9859017 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 Out-of-frame Intra-chr p22.2 49679 ChimerSeq STARFusion TCGA_RNA-Seq HELZ-TTC7A HELZ chr17 65235549 - TTC7A chr2 47220589 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-CDS Inter-chr q24.2 p21 49680 ChimerSeq STARFusion TCGA_RNA-Seq HK1-SKIL HK1 chr10 71078766 + SKIL chr3 170077487 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 CDS-5'UTR Inter-chr q22.1 q26.2 Tumor suppressor gene Transcription factor 49681 ChimerSeq STARFusion TCGA_RNA-Seq IAH1-UBE2L3 IAH1 chr2 9618499 + UBE2L3 chr22 21965146 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 Out-of-frame Inter-chr p25.1 q11.21 49682 ChimerSeq STARFusion TCGA_RNA-Seq ITFG1-EXOC4 ITFG1 chr16 47399699 - EXOC4 chr7 133314798 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 In-Frame Inter-chr q12.1 q33 49683 ChimerSeq STARFusion TCGA_RNA-Seq ITGA4-TERF2 ITGA4 chr2 182350719 + TERF2 chr16 69395392 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 Out-of-frame Inter-chr q31.3 q22.1 Transcription factor 49684 ChimerSeq STARFusion TCGA_RNA-Seq KCNMA1-AGAP1 KCNMA1 chr10 79163620 - AGAP1 chr2 236706403 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 Out-of-frame Inter-chr q22.3 q37.2 49685 ChimerSeq STARFusion TCGA_RNA-Seq KCTD7-NUB1 KCTD7 chr7 66104215 + NUB1 chr7 151064025 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 In-Frame Intra-chr q11.21 q36.1 49686 ChimerSeq STARFusion TCGA_RNA-Seq KLHL24-CIRBP KLHL24 chr3 183353581 + CIRBP chr19 1270927 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-5'UTR Inter-chr q27.1 p13.3 49687 ChimerSeq STARFusion TCGA_RNA-Seq LAMA2-EPB41L2 LAMA2 chr6 129419560 + EPB41L2 chr6 131230003 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 In-Frame Intra-chr q22.33 q23.2 49688 ChimerSeq STARFusion TCGA_RNA-Seq LRRC23-SLC25A3 LRRC23 chr12 7016609 + SLC25A3 chr12 98991634 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 In-Frame Intra-chr p13.31 q23.1 49689 ChimerSeq STARFusion TCGA_RNA-Seq LRRFIP2-HN1 LRRFIP2 chr3 37100281 - HN1 chr17 73132345 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 In-Frame Inter-chr p22.2 Seq+ 49690 ChimerSeq STARFusion TCGA_RNA-Seq MBP-PTPN2 MBP chr18 74817167 - PTPN2 chr18 12802150 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 In-Frame Intra-chr q23 p11.21 Tumor suppressor gene 49691 ChimerSeq STARFusion TCGA_RNA-Seq MFSD11-STIP1 MFSD11 chr17 74737146 + STIP1 chr11 63963117 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 In-Frame Inter-chr q25.1 q13.1 49692 ChimerSeq STARFusion TCGA_RNA-Seq MKRN1-UBE2E3 MKRN1 chr7 140178960 - UBE2E3 chr2 181845669 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 CDS-5'UTR Inter-chr q34 q31.3 49693 ChimerSeq STARFusion TCGA_RNA-Seq MRVI1-EIF4G2 MRVI1 chr11 10711812 - EIF4G2 chr11 10827594 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-CDS Intra-chr p15.4 Tumor suppressor gene p15.4 49694 ChimerSeq STARFusion TCGA_RNA-Seq MYBPC1-ARL1 MYBPC1 chr12 101988873 + ARL1 chr12 101799759 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 CDS-3'UTR Intra-chr q23.2 q23.2 49695 ChimerSeq STARFusion TCGA_RNA-Seq NCK1-BIRC6 NCK1 chr3 136581161 + BIRC6 chr2 32768308 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-CDS Inter-chr q22.3 p22.3 49696 ChimerSeq STARFusion TCGA_RNA-Seq NCOA1-ITSN2 NCOA1 chr2 24807429 + ITSN2 chr2 24550984 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-5'UTR Intra-chr p23.3 Oncogene Transcription factor p23.3 49697 ChimerSeq STARFusion TCGA_RNA-Seq NEK9-EPC1 NEK9 chr14 75562075 - EPC1 chr10 32562209 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 In-Frame Inter-chr q24.3 Other:NEK p11.22 Seq+ 49698 ChimerSeq STARFusion TCGA_RNA-Seq NKAPP1-STAG2 NKAPP1 chrX 119378619 - STAG2 chrX 123217271 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 3'UTR-CDS Intra-chr q24 q25 Oncogene 49699 ChimerSeq STARFusion TCGA_RNA-Seq NLRC3-NUP98 NLRC3 chr16 3605782 - NUP98 chr11 3722069 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 Out-of-frame Inter-chr p13.3 p15.4 Oncogene Tumor suppressor gene 49700 ChimerSeq STARFusion TCGA_RNA-Seq NRP1-RSU1 NRP1 chr10 33619636 - RSU1 chr10 16635495 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 In-Frame Intra-chr p11.22 p13 49701 ChimerSeq STARFusion TCGA_RNA-Seq NUP205-TPM1 NUP205 chr7 135269755 + TPM1 chr15 63349184 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 In-Frame Inter-chr q33 q22.2 49702 ChimerSeq STARFusion TCGA_RNA-Seq OLA1-SP3 OLA1 chr2 175087761 - SP3 chr2 174820960 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 Out-of-frame Intra-chr q31.1 q31.1 Transcription factor 49703 ChimerSeq STARFusion TCGA_RNA-Seq OTUD5-FGFR4 OTUD5 chrX 48783123 - FGFR4 chr5 176515240 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 CDS-5'UTR Inter-chr p11.23 q35.2 TK:FGFR Oncogene 49704 ChimerSeq STARFusion TCGA_RNA-Seq PIBF1-POC1B PIBF1 chr13 73401256 + POC1B chr12 89861462 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 In-Frame Inter-chr q21.33 q21.33 49705 ChimerSeq STARFusion TCGA_RNA-Seq PLD3-RCC2 PLD3 chr19 40854675 + RCC2 chr1 17739674 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-CDS Inter-chr q13.2 49706 ChimerSeq STARFusion TCGA_RNA-Seq PLEC-C5orf45 PLEC chr8 145020518 - C5orf45 chr5 179280437 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-CDS Inter-chr q24.3 49707 ChimerSeq STARFusion TCGA_RNA-Seq PLS1-SP140L PLS1 chr3 142408655 + SP140L chr2 231235623 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 In-Frame Inter-chr q23 q37.1 Transcription factor 49708 ChimerSeq STARFusion TCGA_RNA-Seq PRODH-DSP PRODH chr22 18923528 - DSP chr6 7555951 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 Out-of-frame Inter-chr q11.21 Tumor suppressor gene p24.3 Tumor suppressor gene 49709 ChimerSeq STARFusion TCGA_RNA-Seq PRSS22-CTTN PRSS22 chr16 2908024 - CTTN chr11 70269046 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 In-Frame Inter-chr q13.3 49710 ChimerSeq STARFusion TCGA_RNA-Seq QKI-PSMB1 QKI chr6 163876453 + PSMB1 chr6 170858201 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 Out-of-frame Intra-chr q26 49711 ChimerSeq STARFusion TCGA_RNA-Seq RAB40B-CBX6 RAB40B chr17 80656331 - CBX6 chr22 39263206 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 Out-of-frame Inter-chr q25.3 q13.1 49712 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF1-DAPK1 RAPGEF1 chr9 134615157 - DAPK1 chr9 90219869 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-CDS Intra-chr q34.13 q21.33 CAMK:DAPK Tumor suppressor gene 49713 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KA5-UBE2G2 RPS6KA5 chr14 91526676 - UBE2G2 chr21 46193602 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 In-Frame Inter-chr q32.11 q22.3 49714 ChimerSeq STARFusion TCGA_RNA-Seq SEPT7-CREB5 SEPT7 chr7 35840880 + CREB5 chr7 28527793 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 Out-of-frame Intra-chr p14.2 p15.1 Transcription factor 49715 ChimerSeq STARFusion TCGA_RNA-Seq SF1-C9orf3 SF1 chr11 64543970 - C9orf3 chr9 97848964 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 3'UTR-3'UTR Inter-chr q13.1 q22.32 49716 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A26-RBMS3 SLC25A26 chr3 66313803 + RBMS3 chr3 29476237 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 In-Frame Intra-chr p24.1 Tumor suppressor gene 49717 ChimerSeq STARFusion TCGA_RNA-Seq SNHG1-PPP1R32 SNHG1 chr11 62622896 - PPP1R32 chr11 61257254 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 3'UTR-CDS Intra-chr q12.3 q12.2 49718 ChimerSeq STARFusion TCGA_RNA-Seq SNX4-L3MBTL3 SNX4 chr3 125238876 - L3MBTL3 chr6 130343372 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 CDS-5'UTR Inter-chr q21.2 q23.1 Transcription factor 49719 ChimerSeq STARFusion TCGA_RNA-Seq SOCS5-AGPS SOCS5 chr2 46926588 + AGPS chr2 178357876 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-CDS Intra-chr p21 q31.2 49720 ChimerSeq STARFusion TCGA_RNA-Seq ST6GAL1-TSC22D1 ST6GAL1 chr3 186681714 + TSC22D1 chr13 45010231 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-5'UTR Inter-chr q27.3 q14.11 Tumor suppressor gene Transcription factor 49721 ChimerSeq STARFusion TCGA_RNA-Seq STK38L-APP STK38L chr12 27397265 + APP chr21 27284274 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-CDS Inter-chr p11.23 q21.3 Seq+ 49722 ChimerSeq STARFusion TCGA_RNA-Seq SUFU-FOXK2 SUFU chr10 104309863 + FOXK2 chr17 80529600 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 Out-of-frame Inter-chr q24.32 Oncogene Tumor suppressor gene q25.3 Transcription factor 49723 ChimerSeq STARFusion TCGA_RNA-Seq SUN2-MAPK8IP3 SUN2 chr22 39190073 - MAPK8IP3 chr16 1797030 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-CDS Inter-chr q13.1 p13.3 49724 ChimerSeq STARFusion TCGA_RNA-Seq TMED1-DNM2 TMED1 chr19 10945610 - DNM2 chr19 10912964 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 In-Frame Intra-chr p13.2 p13.2 49725 ChimerSeq STARFusion TCGA_RNA-Seq TMEM168-TRIM24 TMEM168 chr7 112430215 - TRIM24 chr7 138189035 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-CDS Intra-chr q31.1 q33 Oncogene Tumor suppressor gene 49726 ChimerSeq STARFusion TCGA_RNA-Seq WWTR1-LCORL WWTR1 chr3 149374663 - LCORL chr4 17847524 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 In-Frame Inter-chr q25.1 p15.31 Transcription factor 49727 ChimerSeq STARFusion TCGA_RNA-Seq XKR9-LACTB2 XKR9 chr8 71619388 + LACTB2 chr8 71556478 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 49728 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-SCAPER ZBTB20 chr3 114866066 - SCAPER chr15 76726651 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-CDS Inter-chr q13.31 Transcription factor q24.3 49729 ChimerSeq STARFusion TCGA_RNA-Seq ZFP30-ZBTB4 ZFP30 chr19 38177352 - ZBTB4 chr17 7370646 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-5'UTR Inter-chr q13.12 Transcription factor Tumor suppressor gene Transcription factor 49730 ChimerSeq STARFusion TCGA_RNA-Seq ZNF407-ZADH2 ZNF407 chr18 72353078 + ZADH2 chr18 72914295 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 In-Frame Intra-chr q22.3 Transcription factor q22.3 49731 ChimerSeq STARFusion TCGA_RNA-Seq ZNF777-PRKCA ZNF777 chr7 149148090 - PRKCA chr17 64799991 + Exonic hg19 STAD TCGA-BR-8364-01A 2 0 Out-of-frame Inter-chr q36.1 Transcription factor q24.2 49732 ChimerSeq STARFusion TCGA_RNA-Seq ZNF781-ZBTB4 ZNF781 chr19 38177352 - ZBTB4 chr17 7370646 - Exonic hg19 STAD TCGA-BR-8364-01A 2 0 5'UTR-5'UTR Inter-chr q13.12 Transcription factor Tumor suppressor gene Transcription factor 49733 ChimerSeq STARFusion TCGA_RNA-Seq CD46-MAPKAPK2 CD46 chr1 207959027 + MAPKAPK2 chr1 206902055 + Exonic hg19 STAD TCGA-CG-4449-01A 34 44 Out-of-frame Intra-chr q32.2 q32.1 CAMK:MAPKAPK Seq+ 49734 ChimerSeq STARFusion TCGA_RNA-Seq BLM-ABHD2 BLM chr15 91260671 + ABHD2 chr15 89694908 + Exonic hg19 STAD TCGA-CG-4449-01A 24 14 5'UTR-CDS Intra-chr q26.1 Oncogene Tumor suppressor gene q26.1 Seq+ 49735 ChimerSeq STARFusion TCGA_RNA-Seq CHMP4B-CBFA2T2 CHMP4B chr20 32399464 + CBFA2T2 chr20 32194762 + Exonic hg19 STAD TCGA-CG-4449-01A 7 34 In-Frame Intra-chr q11.22 q11.21 Seq+ 49736 ChimerSeq STARFusion TCGA_RNA-Seq INPP5D-GIGYF2 INPP5D chr2 233944108 + GIGYF2 chr2 233681581 + Exonic hg19 STAD TCGA-CG-4449-01A 11 16 In-Frame Intra-chr q37.1 Seq+ 49737 ChimerSeq STARFusion TCGA_RNA-Seq ATXN10-ARHGAP8 ATXN10 chr22 46098727 + ARHGAP8 chr22 45221363 + Exonic hg19 STAD TCGA-CG-4449-01A 5 39 In-Frame Intra-chr q13.31 q13.31 49738 ChimerSeq STARFusion TCGA_RNA-Seq ATXN10-ARHGAP8 ATXN10 chr22 46098727 + ARHGAP8 chr22 45241149 + Exonic hg19 STAD TCGA-CG-4449-01A 5 39 In-Frame Intra-chr q13.31 q13.31 49739 ChimerSeq STARFusion TCGA_RNA-Seq EPS15L1-AKAP8 EPS15L1 chr19 16539513 - AKAP8 chr19 15485446 - Exonic hg19 STAD TCGA-CG-4449-01A 9 21 Out-of-frame Intra-chr p13.11 p13.12 Transcription factor Seq+ 49740 ChimerSeq STARFusion TCGA_RNA-Seq DHX15-CCDC149 DHX15 chr4 24550478 - CCDC149 chr4 24839894 - Exonic hg19 STAD TCGA-CG-4449-01A 8 12 In-Frame Intra-chr p15.2 p15.2 Seq+ 49741 ChimerSeq STARFusion TCGA_RNA-Seq GRHL2-POLR2K GRHL2 chr8 102555664 + POLR2K chr8 101163575 + Exonic hg19 STAD TCGA-CG-4449-01A 5 19 CDS-5'UTR Intra-chr q22.3 Transcription factor q22.2 Seq+ 49742 ChimerSeq STARFusion TCGA_RNA-Seq DDX10-ATM DDX10 chr11 108594189 + ATM chr11 108235809 + Exonic hg19 STAD TCGA-CG-4449-01A 4 17 In-Frame Intra-chr q22.3 q22.3 Atypical:PIKK Oncogene Tumor suppressor gene Seq+ 49743 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-CDK12 GRB7 chr17 37902455 + CDK12 chr17 37680927 + Exonic hg19 STAD TCGA-CG-4449-01A 4 15 Out-of-frame Intra-chr q12 q12 Oncogene Seq+ 49744 ChimerSeq STARFusion TCGA_RNA-Seq VPS8-EIF2AK4 VPS8 chr3 184588593 + EIF2AK4 chr15 40318178 + Exonic hg19 STAD TCGA-CG-4449-01A 5 11 In-Frame Inter-chr q27.2 q15.1 Seq+ 49745 ChimerSeq STARFusion TCGA_RNA-Seq ZNF799-EPS15L1 ZNF799 chr19 12511882 - EPS15L1 chr19 16545301 - Exonic hg19 STAD TCGA-CG-4449-01A 3 18 In-Frame Intra-chr p13.2 Transcription factor p13.11 Seq+ 49746 ChimerSeq STARFusion TCGA_RNA-Seq CASZ1-MASP2 CASZ1 chr1 10856621 - MASP2 chr1 11090939 - Exonic hg19 STAD TCGA-CG-4449-01A 5 9 5'UTR-CDS Intra-chr p36.22 Transcription factor p36.22 KB Pub Seq+ 49747 ChimerSeq STARFusion TCGA_RNA-Seq CRLS1-CDS2 CRLS1 chr20 6012726 + CDS2 chr20 5165504 + Exonic hg19 STAD TCGA-CG-4449-01A 5 9 Out-of-frame Intra-chr p12.3 p12.3 Seq+ 49748 ChimerSeq STARFusion TCGA_RNA-Seq SEC14L1-MGAT5B SEC14L1 chr17 75139741 + MGAT5B chr17 74921048 + Exonic hg19 STAD TCGA-CG-4449-01A 5 9 Out-of-frame Intra-chr q25.2 q25.2 Seq+ 49749 ChimerSeq STARFusion TCGA_RNA-Seq ITCH-RALY ITCH chr20 33059320 + RALY chr20 32659872 + Exonic hg19 STAD TCGA-CG-4449-01A 2 19 CDS-5'UTR Intra-chr q11.22 q11.22 Seq+ 49750 ChimerSeq STARFusion TCGA_RNA-Seq KRI1-MGRN1 KRI1 chr19 10672343 - MGRN1 chr16 4738797 + Exonic hg19 STAD TCGA-CG-4449-01A 2 19 Out-of-frame Inter-chr p13.2 p13.3 49751 ChimerSeq STARFusion TCGA_RNA-Seq P4HA1-CAMK2G P4HA1 chr10 74828604 - CAMK2G chr10 75585718 - Exonic hg19 STAD TCGA-CG-4449-01A 3 15 Out-of-frame Intra-chr q22.1 q22.2 49752 ChimerSeq STARFusion TCGA_RNA-Seq BLM-ABHD2 BLM chr15 91267374 + ABHD2 chr15 89694908 + Exonic hg19 STAD TCGA-CG-4449-01A 3 14 5'UTR-CDS Intra-chr q26.1 Oncogene Tumor suppressor gene q26.1 Seq+ 49753 ChimerSeq STARFusion TCGA_RNA-Seq RSU1-CUBN RSU1 chr10 16858972 - CUBN chr10 16949678 - Exonic hg19 STAD TCGA-CG-4449-01A 4 9 CDS-5'UTR Intra-chr p13 p13 49754 ChimerSeq STARFusion TCGA_RNA-Seq ADCK2-TBXAS1 ADCK2 chr7 140387041 + TBXAS1 chr7 139661718 + Exonic hg19 STAD TCGA-CG-4449-01A 5 4 In-Frame Intra-chr q34 Atypical:ABC1 q34 Seq+ 49755 ChimerSeq STARFusion TCGA_RNA-Seq HIPK1-LRRC42 HIPK1 chr1 114505060 + LRRC42 chr1 54427707 + Exonic hg19 STAD TCGA-CG-4449-01A 5 4 Out-of-frame Intra-chr p13.2 CMGC:DYRK p32.3 Seq+ 49756 ChimerSeq STARFusion TCGA_RNA-Seq ASCC1-MICU1 ASCC1 chr10 73956569 - MICU1 chr10 74135630 - Exonic hg19 STAD TCGA-CG-4449-01A 4 6 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 49757 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF10L-PAK4 ARHGEF10L chr1 17991090 + PAK4 chr19 39660172 + Exonic hg19 STAD TCGA-CG-4449-01A 2 12 CDS-5'UTR Inter-chr p36.13 q13.2 STE:STE20 Seq+ 49758 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-DHX37 NCOR2 chr12 124846672 - DHX37 chr12 125435350 - Exonic hg19 STAD TCGA-CG-4449-01A 4 4 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 49759 ChimerSeq STARFusion TCGA_RNA-Seq C3orf55-KCNAB1 C3orf55 chr3 157271129 + KCNAB1 chr3 155836000 + Exonic hg19 STAD TCGA-CG-4449-01A 3 5 5'UTR-5'UTR Intra-chr q25.31 Seq+ 49760 ChimerSeq STARFusion TCGA_RNA-Seq RTN3-SLC22A9 RTN3 chr11 63449250 + SLC22A9 chr11 63175584 + Exonic hg19 STAD TCGA-CG-4449-01A 2 9 In-Frame Intra-chr q13.1 q12.3 Seq+ 49761 ChimerSeq STARFusion TCGA_RNA-Seq EXD2-RAD51B EXD2 chr14 69695789 + RAD51B chr14 68878141 + Exonic hg19 STAD TCGA-CG-4449-01A 2 7 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 49762 ChimerSeq STARFusion TCGA_RNA-Seq ENAH-LEFTY1 ENAH chr1 225840388 - LEFTY1 chr1 226075732 - Exonic hg19 STAD TCGA-CG-4449-01A 2 5 Out-of-frame Intra-chr q42.12 q42.12 Tumor suppressor gene 49763 ChimerSeq STARFusion TCGA_RNA-Seq C7orf26-GRID2IP C7orf26 chr7 6634231 + GRID2IP chr7 6566400 - Exonic hg19 STAD TCGA-CG-4449-01A 2 4 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 49764 ChimerSeq STARFusion TCGA_RNA-Seq ASCC1-CDH23 ASCC1 chr10 73956569 - CDH23 chr10 73537437 + Exonic hg19 STAD TCGA-CG-4449-01A 2 3 In-Frame Intra-chr q22.1 q22.1 Seq+ 49765 ChimerSeq STARFusion TCGA_RNA-Seq VPS8-EHHADH VPS8 chr3 184573606 + EHHADH chr3 184966305 - Exonic hg19 STAD TCGA-CG-4449-01A 2 3 Out-of-frame Intra-chr q27.2 q27.2 Seq+ 49766 ChimerSeq STARFusion TCGA_RNA-Seq KCNN3-LAPTM4B KCNN3 chr1 154794565 - LAPTM4B chr8 98817581 + Exonic hg19 STAD TCGA-CG-4449-01A 2 0 In-Frame Inter-chr q21.3 q22.1 49767 ChimerSeq STARFusion TCGA_RNA-Seq ZNF652-YPEL2 ZNF652 chr17 47375468 - YPEL2 chr17 57465688 + Exonic hg19 STAD TCGA-CG-4449-01A 2 0 3'UTR-CDS Intra-chr q21.33 Transcription factor q22 49768 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A4-MROH5 SLC45A4 chr8 142318195 - MROH5 chr8 142446168 - Exonic hg19 STAD TCGA-IN-AB1V-01A 62 6 Out-of-frame Intra-chr q24.3 49769 ChimerSeq STARFusion TCGA_RNA-Seq PCIF1-ZSWIM1 PCIF1 chr20 44574722 + ZSWIM1 chr20 44512094 + Exonic hg19 STAD TCGA-IN-AB1V-01A 15 4 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 49770 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076852 + IGH@ chr14 106209410 - Exonic hg19 STAD TCGA-BR-6452-01A 35 1 Out-of-frame Inter-chr q21.2 32.33 49771 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076852 + IGHG1 chr14 106209410 - Exonic hg19 STAD TCGA-BR-6452-01A 35 0 Out-of-frame Inter-chr q21.2 q32.33 49772 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076857 + IGH@ chr14 106237740 - Exonic hg19 STAD TCGA-BR-6452-01A 19 1 Out-of-frame Inter-chr q21.2 32.33 49773 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076857 + IGHG1 chr14 106237740 - Exonic hg19 STAD TCGA-BR-6452-01A 14 0 Out-of-frame Inter-chr q21.2 q32.33 49774 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106237746 - Exonic hg19 STAD TCGA-BR-6452-01A 13 1 Out-of-frame Inter-chr q21.2 32.33 49775 ChimerSeq STARFusion TCGA_RNA-Seq CASC3-WIPF2 CASC3 chr17 38297860 + WIPF2 chr17 38412643 + Exonic hg19 STAD TCGA-HU-A4G6-01A 14 5 CDS-5'UTR Intra-chr q21.1 q21.2 Seq+ 49776 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-PPP1R1B STARD3 chr17 37816526 + PPP1R1B chr17 37785423 + Exonic hg19 STAD TCGA-HU-A4G6-01A 12 9 In-Frame Intra-chr q12 q12 Tumor suppressor gene Seq+ 49777 ChimerSeq STARFusion TCGA_RNA-Seq SETD2-SCAP SETD2 chr3 47139445 - SCAP chr3 47484581 - Exonic hg19 STAD TCGA-BR-A4CR-01A 41 9 CDS-5'UTR Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Seq+ 49778 ChimerSeq STARFusion TCGA_RNA-Seq FAM49B-PSKH2 FAM49B chr8 130874475 - PSKH2 chr8 87086400 - Exonic hg19 STAD TCGA-BR-A4CR-01A 36 9 CDS-5'UTR Intra-chr q24.21 q21.3 CAMK:PSK Seq+ 49779 ChimerSeq STARFusion TCGA_RNA-Seq ATP11A-ULK4 ATP11A chr13 113530255 + ULK4 chr3 41831335 - Exonic hg19 STAD TCGA-BR-A4CR-01A 34 11 In-Frame Inter-chr q34 p22.1 Other:ULK Seq+ 49780 ChimerSeq STARFusion TCGA_RNA-Seq ASAP1-RIMS2 ASAP1 chr8 131370263 - RIMS2 chr8 105105699 + Exonic hg19 STAD TCGA-BR-A4CR-01A 24 7 Out-of-frame Intra-chr q24.22 q22.3 Seq+ 49781 ChimerSeq STARFusion TCGA_RNA-Seq FAM49B-PSKH2 FAM49B chr8 130874475 - PSKH2 chr8 87060996 - Exonic hg19 STAD TCGA-BR-A4CR-01A 17 8 Out-of-frame Intra-chr q24.21 q21.3 CAMK:PSK Seq+ 49782 ChimerSeq STARFusion TCGA_RNA-Seq FAM49B-PSKH2 FAM49B chr8 130874475 - PSKH2 chr8 87076860 - Exonic hg19 STAD TCGA-BR-A4CR-01A 14 8 3'UTR-CDS Intra-chr q24.21 q21.3 CAMK:PSK Seq+ 49783 ChimerSeq STARFusion TCGA_RNA-Seq ASAP1-FAM49B ASAP1 chr8 131370263 - FAM49B chr8 130983241 - Exonic hg19 STAD TCGA-BR-A4CR-01A 13 10 CDS-3'UTR Intra-chr q24.22 q24.21 49784 ChimerSeq STARFusion TCGA_RNA-Seq FBXO46-LGALS4 FBXO46 chr19 46234107 - LGALS4 chr19 39297235 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 854 34 5'UTR-CDS Intra-chr q13.32 Seq+ 49785 ChimerSeq STARFusion TCGA_RNA-Seq DSTN-BANF2 DSTN chr20 17585276 + BANF2 chr20 17716310 + Exonic hg19 STAD TCGA-VQ-A8PE-01A 176 42 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 49786 ChimerSeq STARFusion TCGA_RNA-Seq ARMC6-UBA52 ARMC6 chr19 19144739 + UBA52 chr19 18684103 + Exonic hg19 STAD TCGA-VQ-A8PE-01A 159 42 5'UTR-5'UTR Intra-chr p13.11 p13.11 Seq+ 49787 ChimerSeq STARFusion TCGA_RNA-Seq FRMD8-MUC6 FRMD8 chr11 65168338 + MUC6 chr11 1015883 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 107 20 Out-of-frame Intra-chr q13.1 Seq+ 49788 ChimerSeq STARFusion TCGA_RNA-Seq PROM1-TAPT1 PROM1 chr4 16085601 - TAPT1 chr4 16193146 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 89 4 5'UTR-CDS Intra-chr p15.32 p15.32 49789 ChimerSeq STARFusion TCGA_RNA-Seq ATF7-ATP5G2 ATF7 chr12 54020063 - ATP5G2 chr12 54066429 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 71 67 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.13 Seq+ 49790 ChimerSeq STARFusion TCGA_RNA-Seq LPIN2-MYOM1 LPIN2 chr18 3013085 - MYOM1 chr18 3193956 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 74 9 5'UTR-CDS Intra-chr p11.31 p11.31 Seq+ 49791 ChimerSeq STARFusion TCGA_RNA-Seq ATF7-ATP5G2 ATF7 chr12 54019735 - ATP5G2 chr12 54066429 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 43 62 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.13 Seq+ 49792 ChimerSeq STARFusion TCGA_RNA-Seq ARMC6-UBA52 ARMC6 chr19 19144822 + UBA52 chr19 18684103 + Exonic hg19 STAD TCGA-VQ-A8PE-01A 43 34 5'UTR-5'UTR Intra-chr p13.11 p13.11 Seq+ 49793 ChimerSeq STARFusion TCGA_RNA-Seq BCL7A-PSMD9 BCL7A chr12 122481959 + PSMD9 chr12 122337540 + Exonic hg19 STAD TCGA-VQ-A8PE-01A 47 17 In-Frame Intra-chr q24.31 Seq+ 49794 ChimerSeq STARFusion TCGA_RNA-Seq LETM1-SLBP LETM1 chr4 1821065 - SLBP chr4 1705427 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 45 11 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 49795 ChimerSeq STARFusion TCGA_RNA-Seq ELL-CRLF1 ELL chr19 18632731 - CRLF1 chr19 18710656 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 41 9 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 49796 ChimerSeq STARFusion TCGA_RNA-Seq ARMC6-UBA52 ARMC6 chr19 19145047 + UBA52 chr19 18684103 + Exonic hg19 STAD TCGA-VQ-A8PE-01A 33 34 CDS-5'UTR Intra-chr p13.11 p13.11 Seq+ 49797 ChimerSeq STARFusion TCGA_RNA-Seq IRAK2-VHL IRAK2 chr3 10219704 + VHL chr3 10191471 + Exonic hg19 STAD TCGA-VQ-A8PE-01A 38 9 In-Frame Intra-chr p25.3 TKL:IRAK p25.3 Oncogene Tumor suppressor gene Seq+ 49798 ChimerSeq STARFusion TCGA_RNA-Seq KHDRBS1-LCK KHDRBS1 chr1 32505174 + LCK chr1 32739926 + Exonic hg19 STAD TCGA-VQ-A8PE-01A 28 5 CDS-5'UTR Intra-chr p35.2 p35.2 TK:Src Oncogene Seq+ 49799 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076852 + IGH@ chr14 106209410 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 26 0 Out-of-frame Inter-chr q21.2 32.33 49800 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076852 + IGHG1 chr14 106209410 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 26 0 Out-of-frame Inter-chr q21.2 q32.33 49801 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0100-MYO18A KIAA0100 chr17 26959960 - MYO18A chr17 27414139 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 25 2 Out-of-frame Intra-chr q11.2 q11.2 Oncogene Seq+ 49802 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0100-TIAF1 KIAA0100 chr17 26959960 - TIAF1 chr17 27414139 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 25 2 CDS-5'UTR Intra-chr q11.2 q11.2 Oncogene 49803 ChimerSeq STARFusion TCGA_RNA-Seq SLMAP-RPP14 SLMAP chr3 57743576 + RPP14 chr3 58302242 + Exonic hg19 STAD TCGA-VQ-A8PE-01A 21 10 In-Frame Intra-chr p14.3 p14.3 Seq+ 49804 ChimerSeq STARFusion TCGA_RNA-Seq AXIN1-ARHGDIG AXIN1 chr16 396148 - ARHGDIG chr16 318775 + Exonic hg19 STAD TCGA-VQ-A8PE-01A 20 6 CDS-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 49805 ChimerSeq STARFusion TCGA_RNA-Seq AXIN1-ITFG3 AXIN1 chr16 396148 - ITFG3 chr16 318775 + Exonic hg19 STAD TCGA-VQ-A8PE-01A 20 5 CDS-3'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene Seq+ 49806 ChimerSeq STARFusion TCGA_RNA-Seq AXIN1-ITFG3 AXIN1 chr16 396148 - ITFG3 chr16 318775 + Exonic hg19 STAD TCGA-VQ-A8PE-01A 20 5 CDS-3'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene Seq+ 49807 ChimerSeq STARFusion TCGA_RNA-Seq ETV4-CHID1 ETV4 chr17 41622343 - CHID1 chr11 870499 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 20 5 Out-of-frame Inter-chr q21.31 Oncogene Transcription factor p15.5 Seq+ 49808 ChimerSeq STARFusion TCGA_RNA-Seq CLEC16A-ATF7IP2 CLEC16A chr16 11154879 + ATF7IP2 chr16 10574736 + Exonic hg19 STAD TCGA-VQ-A8PE-01A 20 2 In-Frame Intra-chr p13.13 p13.2 Seq+ 49809 ChimerSeq STARFusion TCGA_RNA-Seq SRC-PTPRT SRC chr20 35993680 + PTPRT chr20 40790182 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 18 10 5'UTR-CDS Intra-chr q11.23 TK:Src Oncogene q13.11 Oncogene Tumor suppressor gene Seq+ 49810 ChimerSeq STARFusion TCGA_RNA-Seq ZNF451-PRIM2 ZNF451 chr6 56963939 + PRIM2 chr6 57183235 + Exonic hg19 STAD TCGA-VQ-A8PE-01A 19 6 CDS-5'UTR Intra-chr p12.1 Transcription factor p11.2 Seq+ 49811 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB7A-COMP ZBTB7A chr19 4060602 - COMP chr19 18899451 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 19 5 Out-of-frame Intra-chr p13.3 Transcription factor p13.11 Seq+ 49812 ChimerSeq STARFusion TCGA_RNA-Seq RABEP1-ZMYND15 RABEP1 chr17 5185815 + ZMYND15 chr17 4646598 + Exonic hg19 STAD TCGA-VQ-A8PE-01A 18 6 In-Frame Intra-chr p13.2 p13.2 Seq+ 49813 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHG5-SAMD4B PLEKHG5 chr1 6550505 - SAMD4B chr19 39870606 + Exonic hg19 STAD TCGA-VQ-A8PE-01A 16 9 5'UTR-CDS Inter-chr p36.31 Oncogene q13.2 Seq+ 49814 ChimerSeq STARFusion TCGA_RNA-Seq FRMD8-MUC6 FRMD8 chr11 65168338 + MUC6 chr11 1016084 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 13 20 Out-of-frame Intra-chr q13.1 Seq+ 49815 ChimerSeq STARFusion TCGA_RNA-Seq KIF3B-POFUT1 KIF3B chr20 30915464 + POFUT1 chr20 30818622 + Exonic hg19 STAD TCGA-VQ-A8PE-01A 16 4 In-Frame Intra-chr q11.21 q11.21 Seq+ 49816 ChimerSeq STARFusion TCGA_RNA-Seq USP4-AGO3 USP4 chr3 49377357 - AGO3 chr1 36469942 + Exonic hg19 STAD TCGA-VQ-A8PE-01A 14 9 Out-of-frame Inter-chr p21.31 p34.3 Seq+ 49817 ChimerSeq STARFusion TCGA_RNA-Seq GDA-C9orf85 GDA chr9 74817658 + C9orf85 chr9 74533341 + Exonic hg19 STAD TCGA-VQ-A8PE-01A 13 10 Out-of-frame Intra-chr q21.13 q21.13 Seq+ 49818 ChimerSeq STARFusion TCGA_RNA-Seq SRC-PTPRT SRC chr20 35993680 + PTPRT chr20 40790179 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 13 10 5'UTR-CDS Intra-chr q11.23 TK:Src Oncogene q13.11 Oncogene Tumor suppressor gene Seq+ 49819 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-SPAG1 VPS13B chr8 100205285 + SPAG1 chr8 101203618 + Exonic hg19 STAD TCGA-VQ-A8PE-01A 15 2 In-Frame Intra-chr q22.2 q22.2 Seq+ 49820 ChimerSeq STARFusion TCGA_RNA-Seq TSC2-TBL3 TSC2 chr16 2100488 + TBL3 chr16 2029879 + Exonic hg19 STAD TCGA-VQ-A8PE-01A 14 4 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 49821 ChimerSeq STARFusion TCGA_RNA-Seq KLHL5-UBE2K KLHL5 chr4 39046716 + UBE2K chr4 39739040 + Exonic hg19 STAD TCGA-VQ-A8PE-01A 14 2 5'UTR-CDS Intra-chr p14 p14 Seq+ 49822 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076857 + IGH@ chr14 106237740 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 14 0 Out-of-frame Inter-chr q21.2 32.33 49823 ChimerSeq STARFusion TCGA_RNA-Seq L2HGDH-SOS2 L2HGDH chr14 50778729 - SOS2 chr14 50641270 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 13 4 Out-of-frame Intra-chr q21.3 q21.3 49824 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L3-RINL SIPA1L3 chr19 38397998 + RINL chr19 39362510 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 12 8 5'UTR-5'UTR Intra-chr q13.13 Seq+ 49825 ChimerSeq STARFusion TCGA_RNA-Seq ENG-NOL9 ENG chr9 130579428 - NOL9 chr1 6604982 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 12 3 In-Frame Inter-chr q34.11 p36.31 Seq+ 49826 ChimerSeq STARFusion TCGA_RNA-Seq KIF27-GKAP1 KIF27 chr9 86530209 - GKAP1 chr9 86357515 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 12 3 In-Frame Intra-chr q21.32 q21.32 49827 ChimerSeq STARFusion TCGA_RNA-Seq PROM1-TAPT1 PROM1 chr4 16085601 - TAPT1 chr4 16198346 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 11 4 5'UTR-CDS Intra-chr p15.32 p15.32 49828 ChimerSeq STARFusion TCGA_RNA-Seq FLJ27365-CDC42EP1 FLJ27365 chr22 46482040 + CDC42EP1 chr22 37962079 + Exonic hg19 STAD TCGA-VQ-A8PE-01A 9 7 Out-of-frame Intra-chr q13.1 49829 ChimerSeq STARFusion TCGA_RNA-Seq TUBD1-PTRH2 TUBD1 chr17 57955588 - PTRH2 chr17 57756880 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 10 3 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 49830 ChimerSeq STARFusion TCGA_RNA-Seq LARP4-DIP2B LARP4 chr12 50824353 + DIP2B chr12 51019759 + Exonic hg19 STAD TCGA-VQ-A8PE-01A 9 4 Out-of-frame Intra-chr q13.12 q13.12 49831 ChimerSeq STARFusion TCGA_RNA-Seq PMS2P3-HIP1 PMS2P3 chr7 75137103 - HIP1 chr7 75174486 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 8 7 3'UTR-CDS Intra-chr q11.23 q11.23 49832 ChimerSeq STARFusion TCGA_RNA-Seq BOK-MEOX1 BOK chr2 242501891 + MEOX1 chr17 41721028 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 6 9 In-Frame Inter-chr q37.3 q21.31 Transcription factor Seq+ 49833 ChimerSeq STARFusion TCGA_RNA-Seq GDA-C9orf85 GDA chr9 74817658 + C9orf85 chr9 74561922 + Exonic hg19 STAD TCGA-VQ-A8PE-01A 5 10 In-Frame Intra-chr q21.13 q21.13 Seq+ 49834 ChimerSeq STARFusion TCGA_RNA-Seq BOK-MEOX1 BOK chr2 242501891 + MEOX1 chr17 41719400 - Exonic hg19 STAD TCGA-VQ-A8PE-01A 4 9 In-Frame Inter-chr q37.3 q21.31 Transcription factor Seq+ 49835 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHG5-SAMD4B PLEKHG5 chr1 6556553 - SAMD4B chr19 39870606 + Exonic hg19 STAD TCGA-VQ-A8PE-01A 4 9 In-Frame Inter-chr p36.31 Oncogene q13.2 Seq+ 49836 ChimerSeq STARFusion TCGA_RNA-Seq MEIS2-TRPM1 MEIS2 chr15 37329015 - TRPM1 chr15 31369187 - Exonic hg19 STAD TCGA-BR-4280-01A 11 4 In-Frame Intra-chr q14 Transcription factor q13.3 Seq+ 49837 ChimerSeq STARFusion TCGA_RNA-Seq MTATP6P1-MTND2P28 MTATP6P1 chr1 569475 + MTND2P28 chr1 565072 + Exonic hg19 STAD TCGA-BR-4280-01A 4 20 Out-of-frame Intra-chr p36.33 p36.33 49838 ChimerSeq STARFusion TCGA_RNA-Seq MTATP6P1-MTND2P28 MTATP6P1 chr1 569462 + MTND2P28 chr1 565376 + Exonic hg19 STAD TCGA-BR-4280-01A 3 20 Out-of-frame Intra-chr p36.33 p36.33 49839 ChimerSeq STARFusion TCGA_RNA-Seq SMEK1-FBLN5 SMEK1 chr14 91975850 - FBLN5 chr14 92361416 - Exonic hg19 STAD TCGA-BR-A4QI-01A 383 53 In-Frame Intra-chr q32.12 Seq+ 49840 ChimerSeq STARFusion TCGA_RNA-Seq DICER1-CLMN DICER1 chr14 95623567 - CLMN chr14 95663031 - Exonic hg19 STAD TCGA-BR-A4QI-01A 91 5 5'UTR-CDS Intra-chr q32.13 Oncogene Tumor suppressor gene q32.13 Seq+ 49841 ChimerSeq STARFusion TCGA_RNA-Seq CCND3-EHMT2 CCND3 chr6 42016239 - EHMT2 chr6 31848625 - Exonic hg19 STAD TCGA-BR-A4QI-01A 81 40 5'UTR-CDS Intra-chr p21.1 Seq+ 49842 ChimerSeq STARFusion TCGA_RNA-Seq LTBP1-YIPF4 LTBP1 chr2 33413918 + YIPF4 chr2 32526451 + Exonic hg19 STAD TCGA-BR-A4QI-01A 81 33 In-Frame Intra-chr p22.3 p22.3 Seq+ 49843 ChimerSeq STARFusion TCGA_RNA-Seq DDAH2-EHMT2 DDAH2 chr6 31698169 - EHMT2 chr6 31855931 - Exonic hg19 STAD TCGA-BR-A4QI-01A 79 28 Out-of-frame Intra-chr 49844 ChimerSeq STARFusion TCGA_RNA-Seq ATF7IP-VIPR2 ATF7IP chr12 14634119 + VIPR2 chr7 158824560 - Exonic hg19 STAD TCGA-BR-A4QI-01A 73 27 Out-of-frame Inter-chr p13.1 q36.3 Seq+ 49845 ChimerSeq STARFusion TCGA_RNA-Seq DMD-NR0B1 DMD chrX 31222078 - NR0B1 chrX 30322940 - Exonic hg19 STAD TCGA-BR-A4QI-01A 66 17 Out-of-frame Intra-chr p21.1 Tumor suppressor gene p21.2 Transcription factor Seq+ 49846 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPC-CHD8 HNRNPC chr14 21698478 - CHD8 chr14 21854335 - Exonic hg19 STAD TCGA-BR-A4QI-01A 61 16 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 49847 ChimerSeq STARFusion TCGA_RNA-Seq CTAGE5-MIPOL1 CTAGE5 chr14 39796226 + MIPOL1 chr14 38016110 + Exonic hg19 STAD TCGA-BR-A4QI-01A 56 13 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 49848 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-FANCA ANKRD11 chr16 89484692 - FANCA chr16 89838222 - Exonic hg19 STAD TCGA-BR-A4QI-01A 48 15 5'UTR-CDS Intra-chr q24.3 q24.3 Oncogene Seq+ 49849 ChimerSeq STARFusion TCGA_RNA-Seq PIP4K2B-CWC25 PIP4K2B chr17 36933940 - CWC25 chr17 36963229 - Exonic hg19 STAD TCGA-BR-A4QI-01A 50 7 In-Frame Intra-chr q12 q12 Seq+ 49850 ChimerSeq STARFusion TCGA_RNA-Seq GNG12-DIRAS3 GNG12 chr1 68299027 - DIRAS3 chr1 68513045 - Exonic hg19 STAD TCGA-BR-A4QI-01A 48 11 5'UTR-5'UTR Intra-chr p31.3 p31.3 Tumor suppressor gene Seq+ 49851 ChimerSeq STARFusion TCGA_RNA-Seq GOLGA4-MLH1 GOLGA4 chr3 37360685 + MLH1 chr3 37061801 + Exonic hg19 STAD TCGA-BR-A4QI-01A 48 7 Out-of-frame Intra-chr p22.2 p22.2 Oncogene Tumor suppressor gene Seq+ 49852 ChimerSeq STARFusion TCGA_RNA-Seq IFT43-TTLL5 IFT43 chr14 76488737 + TTLL5 chr14 76349028 + Exonic hg19 STAD TCGA-BR-A4QI-01A 44 3 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 49853 ChimerSeq STARFusion TCGA_RNA-Seq ZNF416-C19orf18 ZNF416 chr19 58089425 - C19orf18 chr19 58478000 - Exonic hg19 STAD TCGA-BR-A4QI-01A 35 16 Out-of-frame Intra-chr q13.43 Transcription factor q13.43 Seq+ 49854 ChimerSeq STARFusion TCGA_RNA-Seq ATF7IP-VIPR2 ATF7IP chr12 14634119 + VIPR2 chr7 158824758 - Exonic hg19 STAD TCGA-BR-A4QI-01A 31 27 Out-of-frame Inter-chr p13.1 q36.3 Seq+ 49855 ChimerSeq STARFusion TCGA_RNA-Seq PPP5C-IGFL3 PPP5C chr19 46857246 + IGFL3 chr19 46627578 - Exonic hg19 STAD TCGA-BR-A4QI-01A 36 6 Out-of-frame Intra-chr q13.32 q13.32 Seq+ 49856 ChimerSeq STARFusion TCGA_RNA-Seq CCND3-EHMT2 CCND3 chr6 42016239 - EHMT2 chr6 31848041 - Exonic hg19 STAD TCGA-BR-A4QI-01A 27 40 5'UTR-CDS Intra-chr p21.1 Seq+ 49857 ChimerSeq STARFusion TCGA_RNA-Seq MRPL4-C3P1 MRPL4 chr19 10367501 + C3P1 chr19 10148538 + Exonic hg19 STAD TCGA-BR-A4QI-01A 30 10 CDS-5'UTR Intra-chr p13.2 p13.2 49858 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-PROCA1 TAOK1 chr17 27718042 + PROCA1 chr17 27031861 - Exonic hg19 STAD TCGA-BR-A4QI-01A 26 12 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 49859 ChimerSeq STARFusion TCGA_RNA-Seq CAPZB-EIF4G3 CAPZB chr1 19746155 - EIF4G3 chr1 21377487 - Exonic hg19 STAD TCGA-BR-A4QI-01A 26 2 CDS-5'UTR Intra-chr p36.13 p36.12 Seq+ 49860 ChimerSeq STARFusion TCGA_RNA-Seq CDK2AP1-RILPL1 CDK2AP1 chr12 123756111 - RILPL1 chr12 123957229 - Exonic hg19 STAD TCGA-BR-A4QI-01A 23 11 Out-of-frame Intra-chr q24.31 Tumor suppressor gene q24.31 Seq+ 49861 ChimerSeq STARFusion TCGA_RNA-Seq MIDN-HMHA1 MIDN chr19 1251900 + HMHA1 chr19 1079702 + Exonic hg19 STAD TCGA-BR-A4QI-01A 23 11 In-Frame Intra-chr p13.3 Seq+ 49862 ChimerSeq STARFusion TCGA_RNA-Seq ZNF416-C19orf18 ZNF416 chr19 58089425 - C19orf18 chr19 58472919 - Exonic hg19 STAD TCGA-BR-A4QI-01A 21 16 Out-of-frame Intra-chr q13.43 Transcription factor q13.43 Seq+ 49863 ChimerSeq STARFusion TCGA_RNA-Seq SHB-LYN SHB chr9 37974619 - LYN chr8 56854414 + Exonic hg19 STAD TCGA-BR-A4QI-01A 23 4 CDS-5'UTR Inter-chr p13.1 q12.1 TK:Src Seq+ 49864 ChimerSeq STARFusion TCGA_RNA-Seq LPCAT1-MRPL36 LPCAT1 chr5 1488506 - MRPL36 chr5 1799061 - Exonic hg19 STAD TCGA-BR-A4QI-01A 22 0 CDS-5'UTR Intra-chr p15.33 Seq+ 49865 ChimerSeq STARFusion TCGA_RNA-Seq FUT8-PTBP1P FUT8 chr14 65879932 + PTBP1P chr14 65746065 + Exonic hg19 STAD TCGA-BR-A4QI-01A 20 5 Out-of-frame Intra-chr q23.3 q23.3 49866 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D15-LGR5 TBC1D15 chr12 72233591 + LGR5 chr12 71918186 + Exonic hg19 STAD TCGA-BR-A4QI-01A 20 0 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 49867 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0586-ARID4A KIAA0586 chr14 58927878 + ARID4A chr14 58813129 + Exonic hg19 STAD TCGA-BR-A4QI-01A 17 2 In-Frame Intra-chr q23.1 q23.1 Seq+ 49868 ChimerSeq STARFusion TCGA_RNA-Seq HEXDC-NPLOC4 HEXDC chr17 80386521 + NPLOC4 chr17 79539114 - Exonic hg19 STAD TCGA-BR-A4QI-01A 16 3 In-Frame Intra-chr q25.3 q25.3 Seq+ 49869 ChimerSeq STARFusion TCGA_RNA-Seq SYNGR2-CCDC40 SYNGR2 chr17 76167135 + CCDC40 chr17 78013611 + Exonic hg19 STAD TCGA-BR-A4QI-01A 16 3 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 49870 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125699 - CXCL16 chr17 4637313 - Exonic hg19 STAD TCGA-BR-A4QI-01A 16 1 Out-of-frame Inter-chr q12.2 p13.2 49871 ChimerSeq STARFusion TCGA_RNA-Seq FAF1-EPS15 FAF1 chr1 51323601 - EPS15 chr1 51946986 - Exonic hg19 STAD TCGA-BR-A4QI-01A 14 7 In-Frame Intra-chr p32.3 p32.3 Seq+ 49872 ChimerSeq STARFusion TCGA_RNA-Seq UEVLD-SPTY2D1 UEVLD chr11 18610160 - SPTY2D1 chr11 18638536 - Exonic hg19 STAD TCGA-BR-A4QI-01A 15 2 In-Frame Intra-chr p15.1 p15.1 Seq+ 49873 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0319L-CLSPN KIAA0319L chr1 36019951 - CLSPN chr1 36228922 - Exonic hg19 STAD TCGA-BR-A4QI-01A 14 5 Out-of-frame Intra-chr p34.3 p34.3 Seq+ 49874 ChimerSeq STARFusion TCGA_RNA-Seq XYLT1-QPRT XYLT1 chr16 17352845 - QPRT chr16 29705985 + Exonic hg19 STAD TCGA-BR-A4QI-01A 14 2 In-Frame Intra-chr p12.3 p11.2 Seq+ 49875 ChimerSeq STARFusion TCGA_RNA-Seq PTPRE-TACC2 PTPRE chr10 129705573 + TACC2 chr10 123976142 + Exonic hg19 STAD TCGA-BR-A4QI-01A 12 8 5'UTR-CDS Intra-chr q26.2 q26.13 Seq+ 49876 ChimerSeq STARFusion TCGA_RNA-Seq CD276-C15orf60 CD276 chr15 73976801 + C15orf60 chr15 73843279 + Exonic hg19 STAD TCGA-BR-A4QI-01A 12 3 5'UTR-CDS Intra-chr q24.1 Seq+ 49877 ChimerSeq STARFusion TCGA_RNA-Seq PQLC1-TXNL4A PQLC1 chr18 77679184 - TXNL4A chr18 77755433 - Exonic hg19 STAD TCGA-BR-A4QI-01A 9 11 CDS-5'UTR Intra-chr q23 q23 49878 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-C19orf26 SBNO2 chr19 1174171 - C19orf26 chr19 1236120 - Exonic hg19 STAD TCGA-BR-A4QI-01A 10 6 5'UTR-5'UTR Intra-chr p13.3 Seq+ 49879 ChimerSeq STARFusion TCGA_RNA-Seq ARID5B-LRRC37BP1 ARID5B chr10 63760080 + LRRC37BP1 chr17 28958773 + Exonic hg19 STAD TCGA-BR-A4QI-01A 11 1 CDS-5'UTR Inter-chr q21.2 Transcription factor q11.2 49880 ChimerSeq STARFusion TCGA_RNA-Seq PTPRE-TACC2 PTPRE chr10 129705573 + TACC2 chr10 123974906 + Exonic hg19 STAD TCGA-BR-A4QI-01A 9 8 5'UTR-CDS Intra-chr q26.2 q26.13 Seq+ 49881 ChimerSeq STARFusion TCGA_RNA-Seq STAU2-UBE2W STAU2 chr8 74585342 - UBE2W chr8 74742707 - Exonic hg19 STAD TCGA-BR-A4QI-01A 11 0 Out-of-frame Intra-chr q21.11 q21.11 49882 ChimerSeq STARFusion TCGA_RNA-Seq TNFRSF1A-SCNN1A TNFRSF1A chr12 6438281 - SCNN1A chr12 6459190 - Exonic hg19 STAD TCGA-BR-A4QI-01A 10 3 Out-of-frame Intra-chr p13.31 p13.31 Seq+ 49883 ChimerSeq STARFusion TCGA_RNA-Seq CNOT8-GRIA1 CNOT8 chr5 154252211 + GRIA1 chr5 153143994 + Exonic hg19 STAD TCGA-BR-A4QI-01A 10 1 Out-of-frame Intra-chr q33.2 q33.2 49884 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP26-PCDHA10 ARHGAP26 chr5 142150480 + PCDHA10 chr5 140358534 + Exonic hg19 STAD TCGA-BR-A4QI-01A 10 0 Out-of-frame Intra-chr q31.3 q31.3 49885 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP26-PCDHA11 ARHGAP26 chr5 142150480 + PCDHA11 chr5 140358534 + Exonic hg19 STAD TCGA-BR-A4QI-01A 10 0 Out-of-frame Intra-chr q31.3 q31.3 49886 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP26-PCDHA12 ARHGAP26 chr5 142150480 + PCDHA12 chr5 140358534 + Exonic hg19 STAD TCGA-BR-A4QI-01A 10 0 Out-of-frame Intra-chr q31.3 q31.3 49887 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP26-PCDHA13 ARHGAP26 chr5 142150480 + PCDHA13 chr5 140358534 + Exonic hg19 STAD TCGA-BR-A4QI-01A 10 0 Out-of-frame Intra-chr q31.3 q31.3 49888 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP26-PCDHA6 ARHGAP26 chr5 142150480 + PCDHA6 chr5 140358534 + Exonic hg19 STAD TCGA-BR-A4QI-01A 10 0 Out-of-frame Intra-chr q31.3 q31.3 49889 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP26-PCDHAC1 ARHGAP26 chr5 142150480 + PCDHAC1 chr5 140358534 + Exonic hg19 STAD TCGA-BR-A4QI-01A 10 0 Out-of-frame Intra-chr q31.3 q31.3 49890 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP26-PCDHAC2 ARHGAP26 chr5 142150480 + PCDHAC2 chr5 140358534 + Exonic hg19 STAD TCGA-BR-A4QI-01A 10 0 Out-of-frame Intra-chr q31.3 q31.3 49891 ChimerSeq STARFusion TCGA_RNA-Seq C1orf27-PLA2G4A C1orf27 chr1 186367573 + PLA2G4A chr1 186901895 + Exonic hg19 STAD TCGA-BR-A4QI-01A 9 4 In-Frame Intra-chr q31.1 q31.1 49892 ChimerSeq STARFusion TCGA_RNA-Seq BIRC6-SOS1 BIRC6 chr2 32800433 + SOS1 chr2 39284007 - Exonic hg19 STAD TCGA-BR-A4QI-01A 9 2 Out-of-frame Intra-chr p22.3 p22.1 Seq+ 49893 ChimerSeq STARFusion TCGA_RNA-Seq LYN-SHB LYN chr8 56792662 + SHB chr9 37974834 - Exonic hg19 STAD TCGA-BR-A4QI-01A 9 2 5'UTR-CDS Inter-chr q12.1 TK:Src p13.1 Seq+ 49894 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125718 - CXCL16 chr17 4637332 - Exonic hg19 STAD TCGA-BR-A4QI-01A 9 1 Out-of-frame Inter-chr q12.2 p13.2 49895 ChimerSeq STARFusion TCGA_RNA-Seq AKAP1-ANKFN1 AKAP1 chr17 55162759 + ANKFN1 chr17 54305278 + Exonic hg19 STAD TCGA-BR-A4QI-01A 8 4 5'UTR-CDS Intra-chr q22 q22 Seq+ 49896 ChimerSeq STARFusion TCGA_RNA-Seq GID4-ADORA2B GID4 chr17 17948520 + ADORA2B chr17 15877993 + Exonic hg19 STAD TCGA-BR-A4QI-01A 8 4 Out-of-frame Intra-chr p11.2 p12 49897 ChimerSeq STARFusion TCGA_RNA-Seq KDM5A-SIGLEC17P KDM5A chr12 416112 - SIGLEC17P chr19 51670761 + Exonic hg19 STAD TCGA-BR-A4QI-01A 8 3 CDS-5'UTR Inter-chr p13.33 Tumor suppressor gene q13.41 49898 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L1-PCNX SIPA1L1 chr14 71787898 + PCNX chr14 71502782 + Exonic hg19 STAD TCGA-BR-A4QI-01A 7 4 5'UTR-CDS Intra-chr q24.2 49899 ChimerSeq STARFusion TCGA_RNA-Seq PQLC1-TXNL4A PQLC1 chr18 77693969 - TXNL4A chr18 77755433 - Exonic hg19 STAD TCGA-BR-A4QI-01A 5 11 CDS-5'UTR Intra-chr q23 q23 49900 ChimerSeq STARFusion TCGA_RNA-Seq PQLC1-TXNL4A PQLC1 chr18 77703329 - TXNL4A chr18 77755433 - Exonic hg19 STAD TCGA-BR-A4QI-01A 5 11 CDS-5'UTR Intra-chr q23 q23 49901 ChimerSeq STARFusion TCGA_RNA-Seq ERCC6L-HDAC8 ERCC6L chrX 71458694 - HDAC8 chrX 71571688 - Exonic hg19 STAD TCGA-BR-A4QI-01A 7 2 Out-of-frame Intra-chr q13.1 q13.1 49902 ChimerSeq STARFusion TCGA_RNA-Seq SPRED1-TMCO5A SPRED1 chr15 38545418 + TMCO5A chr15 38227458 + Exonic hg19 STAD TCGA-BR-A4QI-01A 7 0 CDS-5'UTR Intra-chr q14 q14 Seq+ 49903 ChimerSeq STARFusion TCGA_RNA-Seq RAP1A-ATP5F1 RAP1A chr1 112170185 + ATP5F1 chr1 111996833 + Exonic hg19 STAD TCGA-BR-A4QI-01A 6 2 5'UTR-CDS Intra-chr p13.2 Tumor suppressor gene p13.2 49904 ChimerSeq STARFusion TCGA_RNA-Seq DNAJA3-VASN DNAJA3 chr16 4500498 + VASN chr16 4430870 + Exonic hg19 STAD TCGA-BR-A4QI-01A 6 1 CDS-5'UTR Intra-chr Tumor suppressor gene 49905 ChimerSeq STARFusion TCGA_RNA-Seq LRWD1-CUX1 LRWD1 chr7 102105607 + CUX1 chr7 101916637 + Exonic hg19 STAD TCGA-BR-A4QI-01A 5 5 Out-of-frame Intra-chr q22.1 q22.1 Tumor suppressor gene Transcription factor 49906 ChimerSeq STARFusion TCGA_RNA-Seq STAT3-LINC00671 STAT3 chr17 40467656 - LINC00671 chr17 41036703 - Exonic hg19 STAD TCGA-BR-A4QI-01A 6 1 Out-of-frame Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q21.31 49907 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-HAUS8 CEACAM5 chr19 42233234 + HAUS8 chr19 17184668 - Exonic hg19 STAD TCGA-BR-A4QI-01A 6 0 Out-of-frame Intra-chr q13.2 p13.11 49908 ChimerSeq STARFusion TCGA_RNA-Seq VPS4A-CDH3 VPS4A chr16 69345435 + CDH3 chr16 68710288 + Exonic hg19 STAD TCGA-BR-A4QI-01A 6 0 Out-of-frame Intra-chr q22.1 q22.1 49909 ChimerSeq STARFusion TCGA_RNA-Seq RAP1A-ATP5F1 RAP1A chr1 112162556 + ATP5F1 chr1 111992459 + Exonic hg19 STAD TCGA-BR-A4QI-01A 5 2 5'UTR-CDS Intra-chr p13.2 Tumor suppressor gene p13.2 49910 ChimerSeq STARFusion TCGA_RNA-Seq TAF15-AP2B1 TAF15 chr17 34163245 + AP2B1 chr17 34036243 + Exonic hg19 STAD TCGA-BR-A4QI-01A 5 2 In-Frame Intra-chr q12 q12 Seq+ 49911 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1279-DDX50 KIAA1279 chr10 70770771 + DDX50 chr10 70700816 + Exonic hg19 STAD TCGA-BR-A4QI-01A 5 1 In-Frame Intra-chr q22.1 49912 ChimerSeq STARFusion TCGA_RNA-Seq ADK-CDH23 ADK chr10 76074503 + CDH23 chr10 73375261 + Exonic hg19 STAD TCGA-BR-A4QI-01A 5 0 Out-of-frame Intra-chr q22.2 q22.1 49913 ChimerSeq STARFusion TCGA_RNA-Seq AR-TMEM185A AR chrX 66766383 + TMEM185A chrX 148713437 - Exonic hg19 STAD TCGA-BR-A4QI-01A 5 0 Out-of-frame Intra-chr q12 Oncogene Tumor suppressor gene Transcription factor q28 49914 ChimerSeq STARFusion TCGA_RNA-Seq PRMT7-WWOX PRMT7 chr16 68382334 + WWOX chr16 78420757 + Exonic hg19 STAD TCGA-BR-A4QI-01A 5 0 In-Frame Intra-chr q22.1 q23.1 Tumor suppressor gene 49915 ChimerSeq STARFusion TCGA_RNA-Seq PTPRE-TACC2 PTPRE chr10 129780560 + TACC2 chr10 123974906 + Exonic hg19 STAD TCGA-BR-A4QI-01A 3 8 5'UTR-CDS Intra-chr q26.2 q26.13 Seq+ 49916 ChimerSeq STARFusion TCGA_RNA-Seq PQLC1-TXNL4A PQLC1 chr18 77679184 - TXNL4A chr18 77737701 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 11 Out-of-frame Intra-chr q23 q23 49917 ChimerSeq STARFusion TCGA_RNA-Seq SYNGR2-CCDC40 SYNGR2 chr17 76164796 + CCDC40 chr17 78013611 + Exonic hg19 STAD TCGA-BR-A4QI-01A 4 3 In-Frame Intra-chr q25.3 q25.3 Seq+ 49918 ChimerSeq STARFusion TCGA_RNA-Seq TNFRSF1A-SCNN1A TNFRSF1A chr12 6438281 - SCNN1A chr12 6458571 - Exonic hg19 STAD TCGA-BR-A4QI-01A 4 3 3'UTR-CDS Intra-chr p13.31 p13.31 Seq+ 49919 ChimerSeq STARFusion TCGA_RNA-Seq NUSAP1-CHP1 NUSAP1 chr15 41634652 + CHP1 chr15 41535865 + Exonic hg19 STAD TCGA-BR-A4QI-01A 3 6 Out-of-frame Intra-chr q15.1 q15.1 49920 ChimerSeq STARFusion TCGA_RNA-Seq ALDH4A1-CAPZB ALDH4A1 chr1 19228956 - CAPZB chr1 19712120 - Exonic hg19 STAD TCGA-BR-A4QI-01A 4 1 Out-of-frame Intra-chr p36.13 p36.13 49921 ChimerSeq STARFusion TCGA_RNA-Seq DHRS12-ATP7B DHRS12 chr13 52371962 - ATP7B chr13 52518427 - Exonic hg19 STAD TCGA-BR-A4QI-01A 4 1 Out-of-frame Intra-chr q14.3 q14.3 49922 ChimerSeq STARFusion TCGA_RNA-Seq FTCDNL1-ALS2CR11 FTCDNL1 chr2 200710798 - ALS2CR11 chr2 202469420 - Exonic hg19 STAD TCGA-BR-A4QI-01A 4 1 Out-of-frame Intra-chr q33.1 49923 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0319L-CLSPN KIAA0319L chr1 36019951 - CLSPN chr1 36219537 - Exonic hg19 STAD TCGA-BR-A4QI-01A 3 5 In-Frame Intra-chr p34.3 p34.3 Seq+ 49924 ChimerSeq STARFusion TCGA_RNA-Seq UBP1-CLASP2 UBP1 chr3 33431315 - CLASP2 chr3 33653563 - Exonic hg19 STAD TCGA-BR-A4QI-01A 4 1 3'UTR-CDS Intra-chr p22.3 Transcription factor p22.3 49925 ChimerSeq STARFusion TCGA_RNA-Seq ACOT7-TNFRSF25 ACOT7 chr1 6378552 - TNFRSF25 chr1 6522723 - Exonic hg19 STAD TCGA-BR-A4QI-01A 4 0 In-Frame Intra-chr p36.31 p36.31 49926 ChimerSeq STARFusion TCGA_RNA-Seq AKAP1-ANKFN1 AKAP1 chr17 55162759 + ANKFN1 chr17 54302000 + Exonic hg19 STAD TCGA-BR-A4QI-01A 3 4 5'UTR-CDS Intra-chr q22 q22 Seq+ 49927 ChimerSeq STARFusion TCGA_RNA-Seq CDK8-PRKRIRP6 CDK8 chr13 26828906 + PRKRIRP6 chr13 26810523 + Exonic hg19 STAD TCGA-BR-A4QI-01A 4 0 Out-of-frame Intra-chr q12.13 CMGC:CDK Oncogene 49928 ChimerSeq STARFusion TCGA_RNA-Seq HK2-TET3 HK2 chr2 75081582 + TET3 chr2 74273405 + Exonic hg19 STAD TCGA-BR-A4QI-01A 4 0 CDS-5'UTR Intra-chr p12 p13.1 Transcription factor 49929 ChimerSeq STARFusion TCGA_RNA-Seq SBF2-RNF141 SBF2 chr11 10049999 - RNF141 chr11 10552298 - Exonic hg19 STAD TCGA-BR-A4QI-01A 4 0 Out-of-frame Intra-chr p15.4 p15.4 49930 ChimerSeq STARFusion TCGA_RNA-Seq TPD52L2-PPDPF TPD52L2 chr20 62514173 + PPDPF chr20 62152865 + Exonic hg19 STAD TCGA-BR-A4QI-01A 4 0 Out-of-frame Intra-chr q13.33 q13.33 49931 ChimerSeq STARFusion TCGA_RNA-Seq KDM5A-SIGLEC17P KDM5A chr12 416112 - SIGLEC17P chr19 51670632 + Exonic hg19 STAD TCGA-BR-A4QI-01A 3 3 CDS-5'UTR Inter-chr p13.33 Tumor suppressor gene q13.41 49932 ChimerSeq STARFusion TCGA_RNA-Seq C2orf61-CALM2 C2orf61 chr2 47335527 - CALM2 chr2 47389801 - Exonic hg19 STAD TCGA-BR-A4QI-01A 3 2 3'UTR-CDS Intra-chr p21 49933 ChimerSeq STARFusion TCGA_RNA-Seq RAP1A-ATP5F1 RAP1A chr1 112162556 + ATP5F1 chr1 111998708 + Exonic hg19 STAD TCGA-BR-A4QI-01A 3 2 5'UTR-CDS Intra-chr p13.2 Tumor suppressor gene p13.2 49934 ChimerSeq STARFusion TCGA_RNA-Seq RAP1A-ATP5F1 RAP1A chr1 112162556 + ATP5F1 chr1 111996833 + Exonic hg19 STAD TCGA-BR-A4QI-01A 3 2 5'UTR-CDS Intra-chr p13.2 Tumor suppressor gene p13.2 49935 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-MMP20 TMEM123 chr11 102319543 - MMP20 chr11 102482634 - Exonic hg19 STAD TCGA-BR-A4QI-01A 3 2 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 49936 ChimerSeq STARFusion TCGA_RNA-Seq DHRS12-ATP7B DHRS12 chr13 52373670 - ATP7B chr13 52516690 - Exonic hg19 STAD TCGA-BR-A4QI-01A 3 1 In-Frame Intra-chr q14.3 q14.3 49937 ChimerSeq STARFusion TCGA_RNA-Seq LRWD1-CUX1 LRWD1 chr7 102105625 + CUX1 chr7 101916637 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 5 Out-of-frame Intra-chr q22.1 q22.1 Tumor suppressor gene Transcription factor 49938 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-ATP5D SBNO2 chr19 1147308 - ATP5D chr19 1244096 + Exonic hg19 STAD TCGA-BR-A4QI-01A 3 1 Out-of-frame Intra-chr p13.3 p13.3 49939 ChimerSeq STARFusion TCGA_RNA-Seq ACACA-CRLF3 ACACA chr17 35506788 - CRLF3 chr17 29100515 - Exonic hg19 STAD TCGA-BR-A4QI-01A 3 0 CDS-3'UTR Intra-chr q11.2 49940 ChimerSeq STARFusion TCGA_RNA-Seq ACOT7-TNFRSF25 ACOT7 chr1 6378552 - TNFRSF25 chr1 6522726 - Exonic hg19 STAD TCGA-BR-A4QI-01A 3 0 In-Frame Intra-chr p36.31 p36.31 49941 ChimerSeq STARFusion TCGA_RNA-Seq AKAP1-ANKFN1 AKAP1 chr17 55163898 + ANKFN1 chr17 54305278 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 4 5'UTR-CDS Intra-chr q22 q22 Seq+ 49942 ChimerSeq STARFusion TCGA_RNA-Seq APOD-EML2 APOD chr3 195295856 - EML2 chr19 46119386 - Exonic hg19 STAD TCGA-BR-A4QI-01A 3 0 Out-of-frame Inter-chr q29 q13.32 49943 ChimerSeq STARFusion TCGA_RNA-Seq C1orf27-PLA2G4A C1orf27 chr1 186363147 + PLA2G4A chr1 186901895 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 4 In-Frame Intra-chr q31.1 q31.1 49944 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-HAUS8 CEACAM5 chr19 42233228 + HAUS8 chr19 17184674 - Exonic hg19 STAD TCGA-BR-A4QI-01A 3 0 Out-of-frame Intra-chr q13.2 p13.11 49945 ChimerSeq STARFusion TCGA_RNA-Seq CTSO-DPP6 CTSO chr4 156845287 - DPP6 chr7 154685154 + Exonic hg19 STAD TCGA-BR-A4QI-01A 3 0 Out-of-frame Inter-chr q32.1 49946 ChimerSeq STARFusion TCGA_RNA-Seq GNG12-WLS GNG12 chr1 68299027 - WLS chr1 68564436 - Exonic hg19 STAD TCGA-BR-A4QI-01A 3 0 5'UTR-CDS Intra-chr p31.3 p31.3 49947 ChimerSeq STARFusion TCGA_RNA-Seq ILF2-MTERF ILF2 chr1 153634520 - MTERF chr7 91500268 - Exonic hg19 STAD TCGA-BR-A4QI-01A 3 0 Out-of-frame Inter-chr q21.3 49948 ChimerSeq STARFusion TCGA_RNA-Seq ITIH5-CYCS ITIH5 chr10 7682717 - CYCS chr7 25164879 - Exonic hg19 STAD TCGA-BR-A4QI-01A 3 0 CDS-5'UTR Inter-chr p14 p15.3 49949 ChimerSeq STARFusion TCGA_RNA-Seq LMNB2-HDGFRP2 LMNB2 chr19 2456668 - HDGFRP2 chr19 4496299 + Exonic hg19 STAD TCGA-BR-A4QI-01A 3 0 In-Frame Intra-chr p13.3 49950 ChimerSeq STARFusion TCGA_RNA-Seq LPP-PARL LPP chr3 188124101 + PARL chr3 183585848 - Exonic hg19 STAD TCGA-BR-A4QI-01A 3 0 Out-of-frame Intra-chr q27.3 Oncogene q27.1 49951 ChimerSeq STARFusion TCGA_RNA-Seq MGST1-TUBB MGST1 chr12 16507204 + TUBB chr6 30691716 + Exonic hg19 STAD TCGA-BR-A4QI-01A 3 0 Out-of-frame Inter-chr p12.3 49952 ChimerSeq STARFusion TCGA_RNA-Seq PRMT7-WWOX PRMT7 chr16 68380183 + WWOX chr16 78420757 + Exonic hg19 STAD TCGA-BR-A4QI-01A 3 0 In-Frame Intra-chr q22.1 q23.1 Tumor suppressor gene 49953 ChimerSeq STARFusion TCGA_RNA-Seq RAB13-SPARCL1 RAB13 chr1 153954471 - SPARCL1 chr4 88414762 - Exonic hg19 STAD TCGA-BR-A4QI-01A 3 0 Out-of-frame Inter-chr q21.3 q22.1 Tumor suppressor gene 49954 ChimerSeq STARFusion TCGA_RNA-Seq RALY-EIF2S2 RALY chr20 32619410 + EIF2S2 chr20 32693351 - Exonic hg19 STAD TCGA-BR-A4QI-01A 3 0 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 49955 ChimerSeq STARFusion TCGA_RNA-Seq RPL22-ACOT7 RPL22 chr1 6252990 - ACOT7 chr1 6324755 - Exonic hg19 STAD TCGA-BR-A4QI-01A 3 0 Out-of-frame Intra-chr p36.31 p36.31 Seq+ 49956 ChimerSeq STARFusion TCGA_RNA-Seq RPS20-ENC1 RPS20 chr8 56986625 - ENC1 chr5 73931532 - Exonic hg19 STAD TCGA-BR-A4QI-01A 3 0 Out-of-frame Inter-chr q12.1 q13.3 49957 ChimerSeq STARFusion TCGA_RNA-Seq SNX29-NPIPB9 SNX29 chr16 12371893 + NPIPB9 chr16 28773572 + Exonic hg19 STAD TCGA-BR-A4QI-01A 3 0 Out-of-frame Intra-chr p13.13 p11.2 49958 ChimerSeq STARFusion TCGA_RNA-Seq SYNJ2-ZDHHC14 SYNJ2 chr6 158403120 + ZDHHC14 chr6 158074557 + Exonic hg19 STAD TCGA-BR-A4QI-01A 3 0 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 49959 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-AVIL TBL1XR1 chr3 176738552 - AVIL chr12 58199948 - Exonic hg19 STAD TCGA-BR-A4QI-01A 3 0 Out-of-frame Inter-chr q26.32 q14.1 49960 ChimerSeq STARFusion TCGA_RNA-Seq TET3-ALMS1P TET3 chr2 74275538 + ALMS1P chr2 73898157 + Exonic hg19 STAD TCGA-BR-A4QI-01A 3 0 CDS-5'UTR Intra-chr p13.1 Transcription factor 49961 ChimerSeq STARFusion TCGA_RNA-Seq UBB-TBX3 UBB chr17 16285656 + TBX3 chr12 115110107 - Exonic hg19 STAD TCGA-BR-A4QI-01A 3 0 Out-of-frame Inter-chr p11.2 q24.21 Transcription factor 49962 ChimerSeq STARFusion TCGA_RNA-Seq UCP2-AGPAT2 UCP2 chr11 73687682 - AGPAT2 chr9 139567721 - Exonic hg19 STAD TCGA-BR-A4QI-01A 3 0 Out-of-frame Inter-chr q13.4 q34.3 49963 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-SPEF2 NIPBL chr5 36877280 + SPEF2 chr5 35628562 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 3 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 49964 ChimerSeq STARFusion TCGA_RNA-Seq KIF11-KCTD16 KIF11 chr10 94372887 + KCTD16 chr5 143853223 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 2 Out-of-frame Inter-chr q23.33 q31.3 49965 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-MMP20 TMEM123 chr11 102319543 - MMP20 chr11 102480761 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 2 In-Frame Intra-chr q22.2 q22.2 Seq+ 49966 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-MMP20 TMEM123 chr11 102319543 - MMP20 chr11 102487790 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 2 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 49967 ChimerSeq STARFusion TCGA_RNA-Seq ARMC7-ICT1 ARMC7 chr17 73106701 + ICT1 chr17 73013173 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 1 Out-of-frame Intra-chr q25.1 49968 ChimerSeq STARFusion TCGA_RNA-Seq C1D-WDR92 C1D chr2 68290077 - WDR92 chr2 68352515 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 1 5'UTR-3'UTR Intra-chr p14 p14 49969 ChimerSeq STARFusion TCGA_RNA-Seq C1D-WDR92 C1D chr2 68290077 - WDR92 chr2 68358577 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 1 5'UTR-CDS Intra-chr p14 p14 49970 ChimerSeq STARFusion TCGA_RNA-Seq C1D-WDR92 C1D chr2 68290090 - WDR92 chr2 68358577 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 1 5'UTR-CDS Intra-chr p14 p14 49971 ChimerSeq STARFusion TCGA_RNA-Seq FTCDNL1-ALS2CR11 FTCDNL1 chr2 200684295 - ALS2CR11 chr2 202469420 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 1 Out-of-frame Intra-chr q33.1 49972 ChimerSeq STARFusion TCGA_RNA-Seq ABI1-FAM210A ABI1 chr10 27112067 - FAM210A chr18 13666712 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Inter-chr p12.1 p11.21 49973 ChimerSeq STARFusion TCGA_RNA-Seq ACAA1-HNRNPU ACAA1 chr3 38173417 - HNRNPU chr1 245020158 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Inter-chr p22.2 q44 49974 ChimerSeq STARFusion TCGA_RNA-Seq ACLY-SYTL2 ACLY chr17 40075133 - SYTL2 chr11 85432002 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 5'UTR-CDS Inter-chr q21.2 q14.1 49975 ChimerSeq STARFusion TCGA_RNA-Seq ACYP1-LRRC59 ACYP1 chr14 75530173 - LRRC59 chr17 48460596 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Inter-chr q24.3 q21.33 49976 ChimerSeq STARFusion TCGA_RNA-Seq ALAD-ZADH2 ALAD chr9 116163492 - ZADH2 chr18 72914295 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 5'UTR-CDS Inter-chr q32 q22.3 49977 ChimerSeq STARFusion TCGA_RNA-Seq ALKBH5-DRG2 ALKBH5 chr17 18098349 + DRG2 chr17 18009747 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Intra-chr p11.2 p11.2 49978 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-CRTC1 ANKRD11 chr16 89484692 - CRTC1 chr19 18853720 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 5'UTR-CDS Inter-chr q24.3 p13.11 Oncogene 49979 ChimerSeq STARFusion TCGA_RNA-Seq APBB2-SLC41A3 APBB2 chr4 41216422 - SLC41A3 chr3 125787089 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 5'UTR-5'UTR Inter-chr p13 q21.3 49980 ChimerSeq STARFusion TCGA_RNA-Seq ASB1-PPARG ASB1 chr2 239335760 + PPARG chr3 12421203 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Inter-chr q37.3 p25.2 Oncogene Tumor suppressor gene Transcription factor 49981 ChimerSeq STARFusion TCGA_RNA-Seq BEST2-CCNI BEST2 chr19 12863558 + CCNI chr4 77976533 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Inter-chr p13.13 q21.1 49982 ChimerSeq STARFusion TCGA_RNA-Seq BIRC6-PTBP1 BIRC6 chr2 32673996 + PTBP1 chr19 803561 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Inter-chr p22.3 p13.3 49983 ChimerSeq STARFusion TCGA_RNA-Seq CAPZA2-SRP9 CAPZA2 chr7 116502704 + SRP9 chr1 225965637 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 CDS-5'UTR Inter-chr q31.2 q42.12 49984 ChimerSeq STARFusion TCGA_RNA-Seq CAPZB-SLC25A43 CAPZB chr1 19811930 - SLC25A43 chrX 118585972 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Inter-chr p36.13 q24 49985 ChimerSeq STARFusion TCGA_RNA-Seq CCAT1-PVT1 CCAT1 chr8 128231055 - PVT1 chr8 128867401 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Intra-chr q24.21 q24.21 49986 ChimerSeq STARFusion TCGA_RNA-Seq CCDC40-TMC8 CCDC40 chr17 78014069 + TMC8 chr17 76134086 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Intra-chr q25.3 q25.3 49987 ChimerSeq STARFusion TCGA_RNA-Seq CHD1-ST8SIA4 CHD1 chr5 98262038 - ST8SIA4 chr5 100222304 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Intra-chr q21.1 Tumor suppressor gene q21.1 Seq+ 49988 ChimerSeq STARFusion TCGA_RNA-Seq CHD7-RAB2A CHD7 chr8 61591641 + RAB2A chr8 61471411 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 5'UTR-CDS Intra-chr q12.2 q12.1 Seq+ 49989 ChimerSeq STARFusion TCGA_RNA-Seq CHTF18-RHOT2 CHTF18 chr16 841370 + RHOT2 chr16 719553 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Intra-chr p13.3 p13.3 Seq+ 49990 ChimerSeq STARFusion TCGA_RNA-Seq CSGALNACT2-NSMCE1 CSGALNACT2 chr10 43634015 + NSMCE1 chr16 27268902 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 5'UTR-5'UTR Inter-chr q11.21 p12.1 49991 ChimerSeq STARFusion TCGA_RNA-Seq CTTNBP2NL-TCEB2 CTTNBP2NL chr1 112938894 + TCEB2 chr16 2827128 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 5'UTR-CDS Inter-chr p13.2 49992 ChimerSeq STARFusion TCGA_RNA-Seq DENND1B-C1orf27 DENND1B chr1 197741998 - C1orf27 chr1 186375215 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Intra-chr q31.3 q31.1 Seq+ 49993 ChimerSeq STARFusion TCGA_RNA-Seq DERL1-ATAD2 DERL1 chr8 124054210 - ATAD2 chr8 124392917 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Intra-chr q24.13 q24.13 49994 ChimerSeq STARFusion TCGA_RNA-Seq DNPEP-CD2AP DNPEP chr2 220251792 - CD2AP chr6 47591922 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Inter-chr q35 p12.3 49995 ChimerSeq STARFusion TCGA_RNA-Seq DTWD1-GALK2 DTWD1 chr15 49917628 + GALK2 chr15 49493359 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Intra-chr q21.2 q21.1 49996 ChimerSeq STARFusion TCGA_RNA-Seq ENOX2-CMC4 ENOX2 chrX 130035658 - CMC4 chrX 154292308 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Intra-chr q26.1 q28 49997 ChimerSeq STARFusion TCGA_RNA-Seq ENOX2-MTCP1 ENOX2 chrX 130035658 - MTCP1 chrX 154292308 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 5'UTR-3'UTR Intra-chr q26.1 q28 49998 ChimerSeq STARFusion TCGA_RNA-Seq ERCC1-NCBP2 ERCC1 chr19 45924436 - NCBP2 chr3 196666303 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Inter-chr q13.32 Oncogene q29 49999 ChimerSeq STARFusion TCGA_RNA-Seq FAM168B-HMCES FAM168B chr2 131840150 - HMCES chr3 129017197 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Inter-chr q21.1 q21.3 50000 ChimerSeq STARFusion TCGA_RNA-Seq FAM208B-GDI2 FAM208B chr10 5727138 + GDI2 chr10 5842668 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 5'UTR-CDS Intra-chr p15.1 p15.1 50001 ChimerSeq STARFusion TCGA_RNA-Seq FKBP14-FLNB FKBP14 chr7 30062281 - FLNB chr3 58116468 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Inter-chr p14.3 p14.3 50002 ChimerSeq STARFusion TCGA_RNA-Seq FLAD1-POLE FLAD1 chr1 154956542 + POLE chr12 133236095 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Inter-chr q21.3 q24.33 50003 ChimerSeq STARFusion TCGA_RNA-Seq FLVCR2-KLF5 FLVCR2 chr14 76108241 + KLF5 chr13 73649846 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Inter-chr q24.3 q22.1 Tumor suppressor gene Transcription factor 50004 ChimerSeq STARFusion TCGA_RNA-Seq FUZ-VRK3 FUZ chr19 50316253 - VRK3 chr19 50519420 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 CDS-5'UTR Intra-chr q13.33 q13.33 CK1:VRK 50005 ChimerSeq STARFusion TCGA_RNA-Seq GAS2L3-PDHX GAS2L3 chr12 100967563 + PDHX chr11 35013862 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 5'UTR-CDS Inter-chr q23.1 p13 50006 ChimerSeq STARFusion TCGA_RNA-Seq GCNT3-CSPP1 GCNT3 chr15 59909080 + CSPP1 chr8 68070682 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 5'UTR-CDS Inter-chr q22.2 q13.1 50007 ChimerSeq STARFusion TCGA_RNA-Seq GPR126-VTA1 GPR126 chr6 142691930 + VTA1 chr6 142519576 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Intra-chr q24.1 Seq+ 50008 ChimerSeq STARFusion TCGA_RNA-Seq GTF2A2-CTDSPL2 GTF2A2 chr15 59949605 - CTDSPL2 chr15 44751189 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 5'UTR-5'UTR Intra-chr q22.2 q15.3 50009 ChimerSeq STARFusion TCGA_RNA-Seq GUSBP1-STOX1 GUSBP1 chr5 21461975 + STOX1 chr10 70652345 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 5'UTR-CDS Inter-chr p14.3 q22.1 50010 ChimerSeq STARFusion TCGA_RNA-Seq HDLBP-MFSD10 HDLBP chr2 242254985 - MFSD10 chr4 2935671 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 5'UTR-5'UTR Inter-chr q37.3 p16.3 50011 ChimerSeq STARFusion TCGA_RNA-Seq HEATR1-TRMT2B HEATR1 chr1 236739519 - TRMT2B chrX 100292062 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Inter-chr q43 q22.1 50012 ChimerSeq STARFusion TCGA_RNA-Seq HPS1-CCNL2 HPS1 chr10 100202881 - CCNL2 chr1 1326245 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Inter-chr q24.2 p36.33 50013 ChimerSeq STARFusion TCGA_RNA-Seq HSP90AA1-DYNC1H1 HSP90AA1 chr14 102549371 - DYNC1H1 chr14 102467291 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Intra-chr q32.31 Oncogene q32.31 50014 ChimerSeq STARFusion TCGA_RNA-Seq IGF2BP2-CNPPD1 IGF2BP2 chr3 185407343 - CNPPD1 chr2 220041569 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Inter-chr q27.2 q35 50015 ChimerSeq STARFusion TCGA_RNA-Seq ITGAV-SMAD2 ITGAV chr2 187490314 + SMAD2 chr18 45377698 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Inter-chr q32.1 Tumor suppressor gene q21.1 Oncogene Tumor suppressor gene 50016 ChimerSeq STARFusion TCGA_RNA-Seq JAK1-STX17 JAK1 chr1 65432016 - STX17 chr9 102677460 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 5'UTR-5'UTR Inter-chr p31.3 TK:JakA Oncogene q31.1 50017 ChimerSeq STARFusion TCGA_RNA-Seq KAT6B-ADK KAT6B chr10 76603236 + ADK chr10 76468079 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Intra-chr Oncogene q22.2 Seq+ 50018 ChimerSeq STARFusion TCGA_RNA-Seq KRTCAP3-BAZ1A KRTCAP3 chr2 27666399 + BAZ1A chr14 35272194 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Inter-chr p23.3 q13.2 50019 ChimerSeq STARFusion TCGA_RNA-Seq KTN1-MYL12B KTN1 chr14 56125332 + MYL12B chr18 3277763 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Inter-chr q22.3 p11.31 50020 ChimerSeq STARFusion TCGA_RNA-Seq LINC00630-ATRX LINC00630 chrX 102024269 + ATRX chrX 76764107 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Intra-chr q22.1 q21.1 Oncogene 50021 ChimerSeq STARFusion TCGA_RNA-Seq LONP1-LAT2 LONP1 chr19 5711782 - LAT2 chr7 73643274 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 CDS-3'UTR Inter-chr p13.3 q11.23 Tumor suppressor gene 50022 ChimerSeq STARFusion TCGA_RNA-Seq LSAMP-FAM101A LSAMP chr3 115805171 - FAM101A chr12 124458433 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 CDS-5'UTR Inter-chr q13.31 Tumor suppressor gene 50023 ChimerSeq STARFusion TCGA_RNA-Seq LSAMP-ZNF664 LSAMP chr3 115805171 - ZNF664 chr12 124458433 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 CDS-5'UTR Inter-chr q13.31 Tumor suppressor gene q24.31 Transcription factor 50024 ChimerSeq STARFusion TCGA_RNA-Seq MAPK8-POT1 MAPK8 chr10 49628363 + POT1 chr7 124462605 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 CDS-3'UTR Inter-chr q11.22 Oncogene q31.33 Oncogene 50025 ChimerSeq STARFusion TCGA_RNA-Seq MPV17-SIGIRR MPV17 chr2 27545315 - SIGIRR chr11 406059 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Inter-chr p23.3 p15.5 50026 ChimerSeq STARFusion TCGA_RNA-Seq MTG1-PAOX MTG1 chr10 135216277 + PAOX chr10 135194964 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Intra-chr q26.3 q26.3 50027 ChimerSeq STARFusion TCGA_RNA-Seq N4BP2L2-RUNX1 N4BP2L2 chr13 33091994 - RUNX1 chr21 36171759 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Inter-chr q13.1 q22.12 Oncogene Tumor suppressor gene Transcription factor Seq+ 50028 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-ADAP1 NCOR2 chr12 125051854 - ADAP1 chr7 944809 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 5'UTR-CDS Inter-chr q24.31 p22.3 50029 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-COX19 NCOR2 chr12 125051854 - COX19 chr7 944809 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 5'UTR-3'UTR Inter-chr q24.31 p22.3 50030 ChimerSeq STARFusion TCGA_RNA-Seq NDUFAF5-PBX4 NDUFAF5 chr20 13769298 + PBX4 chr19 19675898 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Inter-chr p12.1 p13.11 Transcription factor 50031 ChimerSeq STARFusion TCGA_RNA-Seq NNT-BRD4 NNT chr5 43603396 + BRD4 chr19 15383944 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 5'UTR-5'UTR Inter-chr p12 p13.12 Atypical:BRD 50032 ChimerSeq STARFusion TCGA_RNA-Seq NPC2-LRRC28 NPC2 chr14 74947405 - LRRC28 chr15 99926235 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Inter-chr q24.3 q26.3 50033 ChimerSeq STARFusion TCGA_RNA-Seq NQO2-CSDE1 NQO2 chr6 3006793 + CSDE1 chr1 115282346 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Inter-chr p25.2 p13.2 50034 ChimerSeq STARFusion TCGA_RNA-Seq NRF1-IDH2 NRF1 chr7 129297414 + IDH2 chr15 90634876 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Inter-chr q32.2 Tumor suppressor gene Transcription factor q26.1 Oncogene 50035 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL2-ZSWIM7 OSBPL2 chr20 60838747 + ZSWIM7 chr17 15880406 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 CDS-3'UTR Inter-chr q13.33 p12 50036 ChimerSeq STARFusion TCGA_RNA-Seq OXR1-EIF3E OXR1 chr8 107705105 + EIF3E chr8 109214152 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Intra-chr q23.1 q23.1 50037 ChimerSeq STARFusion TCGA_RNA-Seq PDCD2L-CDC123 PDCD2L chr19 34895895 + CDC123 chr10 12257739 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Inter-chr q13.11 p14 50038 ChimerSeq STARFusion TCGA_RNA-Seq PRDX2-ZNF627 PRDX2 chr19 12910673 - ZNF627 chr19 11686065 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 CDS-5'UTR Intra-chr p13.13 p13.2 Transcription factor 50039 ChimerSeq STARFusion TCGA_RNA-Seq PRKACB-SCLT1 PRKACB chr1 84610231 + SCLT1 chr4 129925031 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Inter-chr p31.1 q28.2 50040 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-SUPT4H1 RCC1 chr1 28834672 + SUPT4H1 chr17 56424945 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 5'UTR-CDS Inter-chr p35.3 q22 Seq+ 50041 ChimerSeq STARFusion TCGA_RNA-Seq RHBDD2-SPTSSA RHBDD2 chr7 75513166 + SPTSSA chr14 34904510 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Inter-chr q11.23 q13.1 50042 ChimerSeq STARFusion TCGA_RNA-Seq RPL27-TKT RPL27 chr17 41152119 + TKT chr3 53276258 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Inter-chr q21.31 p21.1 Tumor suppressor gene 50043 ChimerSeq STARFusion TCGA_RNA-Seq RPL31-HCN3 RPL31 chr2 101622533 + HCN3 chr1 155259182 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 CDS-3'UTR Inter-chr q11.2 q22 50044 ChimerSeq STARFusion TCGA_RNA-Seq RPL35A-RAF1 RPL35A chr3 197681018 + RAF1 chr3 12633291 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Intra-chr q29 p25.2 TKL:RAF Oncogene 50045 ChimerSeq STARFusion TCGA_RNA-Seq RPL37A-ERBB4 RPL37A chr2 217364754 + ERBB4 chr2 212652884 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Intra-chr q35 q34 Oncogene Tumor suppressor gene 50046 ChimerSeq STARFusion TCGA_RNA-Seq SEPP1-SNHG12 SEPP1 chr5 42811938 - SNHG12 chr1 28906493 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 5'UTR-3'UTR Inter-chr p35.3 50047 ChimerSeq STARFusion TCGA_RNA-Seq SGK3-STAU2 SGK3 chr8 67625068 + STAU2 chr8 74529686 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 5'UTR-5'UTR Intra-chr q13.1 AGC:SGK q21.11 50048 ChimerSeq STARFusion TCGA_RNA-Seq SGPP2-KCNK1 SGPP2 chr2 223389752 + KCNK1 chr1 233802341 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Inter-chr q36.1 q42.2 50049 ChimerSeq STARFusion TCGA_RNA-Seq SNHG14-SNRPN SNHG14 chr15 25227584 + SNRPN chr15 25212176 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Intra-chr q11.2 q11.2 50050 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-SUPT4H1 SNHG3 chr1 28834672 + SUPT4H1 chr17 56424945 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 5'UTR-CDS Inter-chr p35.3 q22 50051 ChimerSeq STARFusion TCGA_RNA-Seq SNURF-SNRPN SNURF chr15 25227584 + SNRPN chr15 25212176 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Intra-chr q11.2 q11.2 50052 ChimerSeq STARFusion TCGA_RNA-Seq SOS2-DROSHA SOS2 chr14 50697915 - DROSHA chr5 31472339 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Inter-chr q21.3 p13.3 50053 ChimerSeq STARFusion TCGA_RNA-Seq SPTBN1-SLCO1B3 SPTBN1 chr2 54849624 + SLCO1B3 chr12 21013951 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Inter-chr p16.2 Tumor suppressor gene p12.2 50054 ChimerSeq STARFusion TCGA_RNA-Seq TAF6L-PASK TAF6L chr11 62538962 + PASK chr2 242051854 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 5'UTR-CDS Inter-chr q12.3 q37.3 CAMK:CAMKL 50055 ChimerSeq STARFusion TCGA_RNA-Seq TAX1BP1-SLMAP TAX1BP1 chr7 27797752 + SLMAP chr3 57817110 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Inter-chr p15.2 p14.3 50056 ChimerSeq STARFusion TCGA_RNA-Seq TDG-KIF5B TDG chr12 104379506 + KIF5B chr10 32304587 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Inter-chr q23.3 p11.22 50057 ChimerSeq STARFusion TCGA_RNA-Seq THRB-NR1D2 THRB chr3 24536178 - NR1D2 chr3 24009304 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 5'UTR-CDS Intra-chr p24.2 Tumor suppressor gene Transcription factor p24.2 Transcription factor 50058 ChimerSeq STARFusion TCGA_RNA-Seq TMEM38B-FYB TMEM38B chr9 108468034 + FYB chr5 39203089 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Inter-chr q31.2 p13.1 50059 ChimerSeq STARFusion TCGA_RNA-Seq TMEM59-GOLIM4 TMEM59 chr1 54518673 - GOLIM4 chr3 167761317 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Inter-chr p32.3 q26.2 50060 ChimerSeq STARFusion TCGA_RNA-Seq UNC45A-NPIPP1 UNC45A chr15 91486312 + NPIPP1 chr16 15198615 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Inter-chr q26.1 p13.11 50061 ChimerSeq STARFusion TCGA_RNA-Seq USP34-FAM161A USP34 chr2 61597456 - FAM161A chr2 62069495 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Intra-chr p15 p15 Seq+ 50062 ChimerSeq STARFusion TCGA_RNA-Seq WWP2-FAM214A WWP2 chr16 69833198 + FAM214A chr15 52906054 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Inter-chr q22.1 q21.3 50063 ChimerSeq STARFusion TCGA_RNA-Seq XRCC5-RMDN1 XRCC5 chr2 216997110 + RMDN1 chr8 87489553 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Inter-chr q35 Tumor suppressor gene q21.3 50064 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB38-KIF20B ZBTB38 chr3 141088788 + KIF20B chr10 91497144 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 5'UTR-CDS Inter-chr q23 Transcription factor q23.31 Seq+ 50065 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC7-VAPA ZCCHC7 chr9 37126939 + VAPA chr18 9931807 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Inter-chr p13.2 p11.22 50066 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC4-SH3YL1 ZDHHC4 chr7 6621311 + SH3YL1 chr2 231191 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 In-Frame Inter-chr p22.1 p25.3 50067 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC9-RPS6KA3 ZDHHC9 chrX 128957655 - RPS6KA3 chrX 20252932 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Intra-chr q26.1 p22.12 50068 ChimerSeq STARFusion TCGA_RNA-Seq ZFP41-EIF4G2 ZFP41 chr8 144333510 + EIF4G2 chr11 10828928 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 3'UTR-5'UTR Inter-chr q24.3 Transcription factor p15.4 50069 ChimerSeq STARFusion TCGA_RNA-Seq ZFP41-EIF4G2 ZFP41 chr8 144333510 + EIF4G2 chr11 10828928 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 3'UTR-5'UTR Inter-chr q24.3 Transcription factor p15.4 50070 ChimerSeq STARFusion TCGA_RNA-Seq ZNF142-PLCD4 ZNF142 chr2 219505387 - PLCD4 chr2 219496859 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 Out-of-frame Intra-chr q35 Transcription factor q35 50071 ChimerSeq STARFusion TCGA_RNA-Seq ZNF343-CYSTM1 ZNF343 chr20 2473345 - CYSTM1 chr5 139574031 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 0 CDS-5'UTR Inter-chr p13 Transcription factor q31.3 50072 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL2-IFI6 RN7SL2 chr14 50329335 - IFI6 chr1 27992763 - Exonic hg19 STAD TCGA-B7-A5TK-01A 5 8 Out-of-frame Inter-chr q21.3 p35.3 50073 ChimerSeq STARFusion TCGA_RNA-Seq CERS5-LIMA1 CERS5 chr12 50560884 - LIMA1 chr12 50575820 - Exonic hg19 STAD TCGA-BR-6454-01A 55 2 Out-of-frame Intra-chr q13.12 q13.12 Tumor suppressor gene Seq+ 50074 ChimerSeq STARFusion TCGA_RNA-Seq LIN54-PLAC8 LIN54 chr4 83933945 - PLAC8 chr4 84039124 - Exonic hg19 STAD TCGA-BR-6454-01A 13 2 5'UTR-5'UTR Intra-chr q21.22 Transcription factor q21.22 Seq+ 50075 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076852 + IGH@ chr14 106111129 - Exonic hg19 STAD TCGA-BR-6454-01A 11 0 Out-of-frame Inter-chr q21.2 32.33 50076 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG2 GATAD1 chr7 92076852 + IGHG2 chr14 106111129 - Exonic hg19 STAD TCGA-BR-6454-01A 11 0 Out-of-frame Inter-chr q21.2 50077 ChimerSeq STARFusion TCGA_RNA-Seq TIMM23B-LINC00843 TIMM23B chr10 51387763 + LINC00843 chr10 51732772 + Exonic hg19 STAD TCGA-VQ-A927-01A 12 3 Out-of-frame Intra-chr q11.23 q11.23 50078 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-LINC00964 PVT1 chr8 128806980 + LINC00964 chr8 125953705 + Exonic hg19 STAD TCGA-BR-4367-01A 14 32 Out-of-frame Intra-chr q24.21 q24.13 50079 ChimerSeq STARFusion TCGA_RNA-Seq SPATS2-SENP1 SPATS2 chr12 49765073 + SENP1 chr12 48465504 - Exonic hg19 STAD TCGA-BR-4367-01A 2 13 5'UTR-CDS Intra-chr q13.12 q13.11 Seq+ 50080 ChimerSeq STARFusion TCGA_RNA-Seq ELF1-DCLK1 ELF1 chr13 41593364 - DCLK1 chr13 36700293 - Exonic hg19 STAD TCGA-D7-8576-01A 15 16 5'UTR-5'UTR Intra-chr q14.11 Transcription factor q13.3 CAMK:DCAMKL Seq+ 50081 ChimerSeq STARFusion TCGA_RNA-Seq ELF1-MTIF3 ELF1 chr13 41634974 - MTIF3 chr13 28019293 - Exonic hg19 STAD TCGA-D7-8576-01A 17 5 5'UTR-5'UTR Intra-chr q14.11 Transcription factor q12.2 Seq+ 50082 ChimerSeq STARFusion TCGA_RNA-Seq CLDN18-ARHGAP26 CLDN18 chr3 137749947 + ARHGAP26 chr5 142393645 + Exonic hg19 STAD TCGA-D7-8576-01A 16 7 In-Frame Inter-chr q22.3 q31.3 KB Pub Seq+ 50083 ChimerSeq STARFusion TCGA_RNA-Seq CDK8-GTF2F2 CDK8 chr13 26911779 + GTF2F2 chr13 45857577 + Exonic hg19 STAD TCGA-D7-8576-01A 12 5 In-Frame Intra-chr q12.13 CMGC:CDK Oncogene q14.12 Seq+ 50084 ChimerSeq STARFusion TCGA_RNA-Seq ELF1-MTIF3 ELF1 chr13 41634974 - MTIF3 chr13 28019274 - Exonic hg19 STAD TCGA-D7-8576-01A 8 5 Out-of-frame Intra-chr q14.11 Transcription factor q12.2 Seq+ 50085 ChimerSeq STARFusion TCGA_RNA-Seq DGKH-NBEA DGKH chr13 42623101 + NBEA chr13 36006406 + Exonic hg19 STAD TCGA-D7-8576-01A 7 2 Out-of-frame Intra-chr q14.11 q13.3 50086 ChimerSeq STARFusion TCGA_RNA-Seq CDK8-SLC25A15 CDK8 chr13 26828906 + SLC25A15 chr13 41367294 + Exonic hg19 STAD TCGA-D7-8576-01A 4 2 CDS-5'UTR Intra-chr q12.13 CMGC:CDK Oncogene q14.11 50087 ChimerSeq STARFusion TCGA_RNA-Seq ATE1-POLRMT ATE1 chr10 123687505 - POLRMT chr19 633530 - Exonic hg19 STAD TCGA-D7-8576-01A 4 0 Out-of-frame Inter-chr q26.13 p13.3 50088 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL1-ADCY9 RN7SL1 chr14 50053471 + ADCY9 chr16 4033924 - Exonic hg19 STAD TCGA-D7-8576-01A 4 0 Out-of-frame Inter-chr q21.3 p13.3 50089 ChimerSeq STARFusion TCGA_RNA-Seq TES-CAV1 TES chr7 115850788 + CAV1 chr7 116166579 + Exonic hg19 STAD TCGA-D7-8576-01A 4 0 In-Frame Intra-chr q31.2 Tumor suppressor gene q31.2 Tumor suppressor gene 50090 ChimerSeq STARFusion TCGA_RNA-Seq DOK3-FAM193B DOK3 chr5 176937928 - FAM193B chr5 176952206 - Exonic hg19 STAD TCGA-D7-8576-01A 3 2 5'UTR-CDS Intra-chr q35.3 Tumor suppressor gene q35.3 50091 ChimerSeq STARFusion TCGA_RNA-Seq TES-MET TES chr7 115850788 + MET chr7 116339125 + Exonic hg19 STAD TCGA-D7-8576-01A 3 2 CDS-5'UTR Intra-chr q31.2 Tumor suppressor gene q31.2 TK:Met Oncogene 50092 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-MUC5B IGH@ chr14 106054076 - MUC5B chr11 1271709 + Exonic hg19 STAD TCGA-D7-8576-01A 3 0 Out-of-frame Inter-chr 32.33 p15.5 50093 ChimerSeq STARFusion TCGA_RNA-Seq IGHA2-MUC5B IGHA2 chr14 106054076 - MUC5B chr11 1271709 + Exonic hg19 STAD TCGA-D7-8576-01A 3 0 Out-of-frame Inter-chr p15.5 50094 ChimerSeq STARFusion TCGA_RNA-Seq MLPH-KIF5B MLPH chr2 238449600 + KIF5B chr10 32304479 - Exonic hg19 STAD TCGA-D7-8576-01A 3 0 Out-of-frame Inter-chr q37.3 p11.22 50095 ChimerSeq STARFusion TCGA_RNA-Seq REPS2-SLC4A4 REPS2 chrX 17047746 + SLC4A4 chr4 72332161 + Exonic hg19 STAD TCGA-D7-8576-01A 3 0 In-Frame Inter-chr p22.2 q13.3 50096 ChimerSeq STARFusion TCGA_RNA-Seq MET-CFTR MET chr7 116340338 + CFTR chr7 117282492 + Exonic hg19 STAD TCGA-D7-8576-01A 2 3 In-Frame Intra-chr q31.2 TK:Met Oncogene q31.2 Tumor suppressor gene 50097 ChimerSeq STARFusion TCGA_RNA-Seq DOK3-FAM193B DOK3 chr5 176937921 - FAM193B chr5 176952206 - Exonic hg19 STAD TCGA-D7-8576-01A 2 2 5'UTR-CDS Intra-chr q35.3 Tumor suppressor gene q35.3 50098 ChimerSeq STARFusion TCGA_RNA-Seq TES-MET TES chr7 115850788 + MET chr7 116371722 + Exonic hg19 STAD TCGA-D7-8576-01A 2 2 In-Frame Intra-chr q31.2 Tumor suppressor gene q31.2 TK:Met Oncogene 50099 ChimerSeq STARFusion TCGA_RNA-Seq UNC13D-SNX6 UNC13D chr17 73836843 - SNX6 chr14 35045048 - Exonic hg19 STAD TCGA-D7-8576-01A 2 2 Out-of-frame Inter-chr q25.1 q13.1 50100 ChimerSeq STARFusion TCGA_RNA-Seq DSCR3-TTC3 DSCR3 chr21 38639539 - TTC3 chr21 38480692 + Exonic hg19 STAD TCGA-D7-8576-01A 2 1 Out-of-frame Intra-chr q22.13 q22.13 Seq+ 50101 ChimerSeq STARFusion TCGA_RNA-Seq AGFG1-SND1 AGFG1 chr2 228356356 + SND1 chr7 127484377 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 In-Frame Inter-chr q36.3 q32.1 50102 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD13C-LRRC40 ANKRD13C chr1 70790536 - LRRC40 chr1 70625121 - Exonic hg19 STAD TCGA-D7-8576-01A 2 0 In-Frame Intra-chr p31.1 p31.1 50103 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF3-UBE2E2 ARHGEF3 chr3 56916320 - UBE2E2 chr3 23541099 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 Out-of-frame Intra-chr p14.3 p24.3 50104 ChimerSeq STARFusion TCGA_RNA-Seq ATXN2-FRS2 ATXN2 chr12 112036588 - FRS2 chr12 69955960 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 CDS-5'UTR Intra-chr q24.12 q15 50105 ChimerSeq STARFusion TCGA_RNA-Seq ATXN2-SH2B3 ATXN2 chr12 111893833 - SH2B3 chr12 111884557 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 In-Frame Intra-chr q24.12 q24.12 Tumor suppressor gene 50106 ChimerSeq STARFusion TCGA_RNA-Seq C15orf41-LRRC28 C15orf41 chr15 36872162 + LRRC28 chr15 99926235 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 In-Frame Intra-chr q14 q26.3 50107 ChimerSeq STARFusion TCGA_RNA-Seq C1orf110-MCU C1orf110 chr1 162838443 - MCU chr10 74594117 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 5'UTR-CDS Inter-chr q22.1 50108 ChimerSeq STARFusion TCGA_RNA-Seq CALU-PDXDC1 CALU chr7 128379486 + PDXDC1 chr16 15123808 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 5'UTR-CDS Inter-chr q32.1 p13.11 50109 ChimerSeq STARFusion TCGA_RNA-Seq CAPZA2-N4BP2L2 CAPZA2 chr7 116502704 + N4BP2L2 chr13 33101669 - Exonic hg19 STAD TCGA-D7-8576-01A 2 0 Out-of-frame Inter-chr q31.2 q13.1 50110 ChimerSeq STARFusion TCGA_RNA-Seq CAPZA2-TES CAPZA2 chr7 116502704 + TES chr7 115889074 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 Out-of-frame Intra-chr q31.2 q31.2 Tumor suppressor gene Seq+ 50111 ChimerSeq STARFusion TCGA_RNA-Seq CD99L2-CFTR CD99L2 chrX 149963679 - CFTR chr7 117304742 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 Out-of-frame Inter-chr q28 q31.2 Tumor suppressor gene 50112 ChimerSeq STARFusion TCGA_RNA-Seq CDR2-MTHFD1 CDR2 chr16 22441117 - MTHFD1 chr14 64908772 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 5'UTR-CDS Inter-chr p12.2 q23.3 50113 ChimerSeq STARFusion TCGA_RNA-Seq CRYZL1-MPHOSPH8 CRYZL1 chr21 34989012 - MPHOSPH8 chr13 20245346 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 Out-of-frame Inter-chr q22.11 q12.11 50114 ChimerSeq STARFusion TCGA_RNA-Seq CUX1-POR CUX1 chr7 101459373 + POR chr7 75583307 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 CDS-5'UTR Intra-chr q22.1 Tumor suppressor gene Transcription factor q11.23 50115 ChimerSeq STARFusion TCGA_RNA-Seq DCUN1D2-TFDP1 DCUN1D2 chr13 114144982 - TFDP1 chr13 114265311 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 In-Frame Intra-chr q34 q34 Transcription factor Seq+ 50116 ChimerSeq STARFusion TCGA_RNA-Seq DCUN1D4-LRRC66 DCUN1D4 chr4 52753410 + LRRC66 chr4 52869558 - Exonic hg19 STAD TCGA-D7-8576-01A 2 0 Out-of-frame Intra-chr q12 q12 50117 ChimerSeq STARFusion TCGA_RNA-Seq DDHD2-LSM1 DDHD2 chr8 38117665 + LSM1 chr8 38021358 - Exonic hg19 STAD TCGA-D7-8576-01A 2 0 3'UTR-3'UTR Intra-chr p11.23 p11.23 50118 ChimerSeq STARFusion TCGA_RNA-Seq DTNBP1-NUP153 DTNBP1 chr6 15651544 - NUP153 chr6 17640295 - Exonic hg19 STAD TCGA-D7-8576-01A 2 0 Out-of-frame Intra-chr p22.3 p22.3 50119 ChimerSeq STARFusion TCGA_RNA-Seq ELMO2-ZMYND8 ELMO2 chr20 45035187 - ZMYND8 chr20 45976670 - Exonic hg19 STAD TCGA-D7-8576-01A 2 0 5'UTR-CDS Intra-chr q13.12 q13.12 50120 ChimerSeq STARFusion TCGA_RNA-Seq EPHA2-TAPBP EPHA2 chr1 16464348 - TAPBP chr6 33273164 - Exonic hg19 STAD TCGA-D7-8576-01A 2 0 In-Frame Inter-chr p36.13 Tumor suppressor gene 50121 ChimerSeq STARFusion TCGA_RNA-Seq EXT1-GTF2E2 EXT1 chr8 119122324 - GTF2E2 chr8 30437913 - Exonic hg19 STAD TCGA-D7-8576-01A 2 0 Out-of-frame Intra-chr q24.11 Oncogene Tumor suppressor gene p12 50122 ChimerSeq STARFusion TCGA_RNA-Seq GNPTG-PRKCD GNPTG chr16 1402307 + PRKCD chr3 53217137 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 In-Frame Inter-chr p13.3 p21.1 Tumor suppressor gene 50123 ChimerSeq STARFusion TCGA_RNA-Seq IST1-FAR1 IST1 chr16 71929492 + FAR1 chr11 13743277 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 5'UTR-CDS Inter-chr q22.2 p15.3 50124 ChimerSeq STARFusion TCGA_RNA-Seq ITGB4-ACHE ITGB4 chr17 73752698 + ACHE chr7 100491525 - Exonic hg19 STAD TCGA-D7-8576-01A 2 0 In-Frame Inter-chr q25.1 q22.1 Tumor suppressor gene 50125 ChimerSeq STARFusion TCGA_RNA-Seq KAT6B-ADK KAT6B chr10 76719836 + ADK chr10 76349040 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 Out-of-frame Intra-chr Oncogene q22.2 Seq+ 50126 ChimerSeq STARFusion TCGA_RNA-Seq LIMK1-SNRNP70 LIMK1 chr7 73500174 + SNRNP70 chr19 49610882 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 Out-of-frame Inter-chr q11.23 TKL:LISK q13.33 50127 ChimerSeq STARFusion TCGA_RNA-Seq LRRK1-MEF2A LRRK1 chr15 101464934 + MEF2A chr15 100173183 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 CDS-5'UTR Intra-chr q26.3 TKL:LRRK q26.3 Transcription factor 50128 ChimerSeq STARFusion TCGA_RNA-Seq MACC1-SP4 MACC1 chr7 20256922 - SP4 chr7 21550640 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 5'UTR-CDS Intra-chr p21.1 p15.3 Transcription factor 50129 ChimerSeq STARFusion TCGA_RNA-Seq MAGI1-CACNA2D1 MAGI1 chr3 66023671 - CACNA2D1 chr7 81978965 - Exonic hg19 STAD TCGA-D7-8576-01A 2 0 Out-of-frame Inter-chr Oncogene q21.11 50130 ChimerSeq STARFusion TCGA_RNA-Seq MAML3-PPA2 MAML3 chr4 141074014 - PPA2 chr4 106374799 - Exonic hg19 STAD TCGA-D7-8576-01A 2 0 In-Frame Intra-chr q31.1 q24 50131 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAP1-GAPVD1 MAPKAP1 chr9 128305338 - GAPVD1 chr9 128099297 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 In-Frame Intra-chr q33.3 q33.3 50132 ChimerSeq STARFusion TCGA_RNA-Seq MIR4519-QSER1 MIR4519 chr16 30887439 + QSER1 chr11 32975403 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 5'UTR-CDS Inter-chr p11.2 p13 50133 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-DAZAP1 NCOR2 chr12 125051854 - DAZAP1 chr19 1417499 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 5'UTR-CDS Inter-chr q24.31 p13.3 50134 ChimerSeq STARFusion TCGA_RNA-Seq NKTR-SHROOM3 NKTR chr3 42660619 + SHROOM3 chr4 77651957 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 Out-of-frame Inter-chr p22.1 q21.1 50135 ChimerSeq STARFusion TCGA_RNA-Seq NPC1-MYL12B NPC1 chr18 21166251 - MYL12B chr18 3272882 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 CDS-5'UTR Intra-chr q11.2 p11.31 50136 ChimerSeq STARFusion TCGA_RNA-Seq NPTN-PIGS NPTN chr15 73879865 - PIGS chr17 26883990 - Exonic hg19 STAD TCGA-D7-8576-01A 2 0 In-Frame Inter-chr q24.1 q11.2 50137 ChimerSeq STARFusion TCGA_RNA-Seq PCSK5-KIF21A PCSK5 chr9 78722267 + KIF21A chr12 39735926 - Exonic hg19 STAD TCGA-D7-8576-01A 2 0 In-Frame Inter-chr q21.13 q12 50138 ChimerSeq STARFusion TCGA_RNA-Seq PDSS2-SEC63 PDSS2 chr6 107780194 - SEC63 chr6 108246136 - Exonic hg19 STAD TCGA-D7-8576-01A 2 0 In-Frame Intra-chr q21 Tumor suppressor gene q21 50139 ChimerSeq STARFusion TCGA_RNA-Seq PELI1-ANXA4 PELI1 chr2 64371215 - ANXA4 chr2 70008652 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 5'UTR-5'UTR Intra-chr p14 p13.3 Seq+ 50140 ChimerSeq STARFusion TCGA_RNA-Seq PLA2G12A-SGMS2 PLA2G12A chr4 110650758 - SGMS2 chr4 108816466 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 CDS-5'UTR Intra-chr q25 q25 50141 ChimerSeq STARFusion TCGA_RNA-Seq PLCL2-CHSY1 PLCL2 chr3 16926865 + CHSY1 chr15 101775782 - Exonic hg19 STAD TCGA-D7-8576-01A 2 0 In-Frame Inter-chr q26.3 Seq+ 50142 ChimerSeq STARFusion TCGA_RNA-Seq PPP1CB-ACVR1 PPP1CB chr2 28975042 + ACVR1 chr2 158656012 - Exonic hg19 STAD TCGA-D7-8576-01A 2 0 CDS-5'UTR Intra-chr p23.2 q24.1 50143 ChimerSeq STARFusion TCGA_RNA-Seq RCC2-TUBE1 RCC2 chr1 17755602 - TUBE1 chr6 112394101 - Exonic hg19 STAD TCGA-D7-8576-01A 2 0 Out-of-frame Inter-chr q21 50144 ChimerSeq STARFusion TCGA_RNA-Seq RPL37A-PIK3C2G RPL37A chr2 217364754 + PIK3C2G chr12 18443789 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 In-Frame Inter-chr q35 p12.3 50145 ChimerSeq STARFusion TCGA_RNA-Seq RPP14-ATP5C1 RPP14 chr3 58292144 + ATP5C1 chr10 7839010 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 5'UTR-CDS Inter-chr p14.3 p14 50146 ChimerSeq STARFusion TCGA_RNA-Seq RRN3P3-MTHFD1 RRN3P3 chr16 22441117 - MTHFD1 chr14 64908772 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 3'UTR-CDS Inter-chr q23.3 50147 ChimerSeq STARFusion TCGA_RNA-Seq SCAF11-UBXN4 SCAF11 chr12 46384136 - UBXN4 chr2 136511109 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 5'UTR-CDS Inter-chr q12 q21.3 50148 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A10-P4HB SLC25A10 chr17 79682102 + P4HB chr17 79801968 - Exonic hg19 STAD TCGA-D7-8576-01A 2 0 In-Frame Intra-chr q25.3 q25.3 50149 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A10-P4HB SLC25A10 chr17 79682102 + P4HB chr17 79801968 - Exonic hg19 STAD TCGA-D7-8576-01A 2 0 In-Frame Intra-chr q25.3 q25.3 50150 ChimerSeq STARFusion TCGA_RNA-Seq SPRED2-BRI3BP SPRED2 chr2 65659096 - BRI3BP chr12 125497080 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 Out-of-frame Inter-chr p14 q24.31 50151 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-ATP6V1C1 TBL1XR1 chr3 176914909 - ATP6V1C1 chr8 104061098 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 5'UTR-CDS Inter-chr q26.32 q22.3 50152 ChimerSeq STARFusion TCGA_RNA-Seq TJP1-KIAA1468 TJP1 chr15 30114205 - KIAA1468 chr18 59878386 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 Out-of-frame Inter-chr q21.33 50153 ChimerSeq STARFusion TCGA_RNA-Seq TMEM2-ALDH1A1 TMEM2 chr9 74383273 - ALDH1A1 chr9 75555168 - Exonic hg19 STAD TCGA-D7-8576-01A 2 0 5'UTR-CDS Intra-chr q21.13 q21.13 50154 ChimerSeq STARFusion TCGA_RNA-Seq TRAK1-PIK3CB TRAK1 chr3 42133052 + PIK3CB chr3 138384045 - Exonic hg19 STAD TCGA-D7-8576-01A 2 0 Out-of-frame Intra-chr p22.1 q22.3 Oncogene 50155 ChimerSeq STARFusion TCGA_RNA-Seq TRIT1-DNAJC8 TRIT1 chr1 40348990 - DNAJC8 chr1 28541507 - Exonic hg19 STAD TCGA-D7-8576-01A 2 0 In-Frame Intra-chr p34.2 Tumor suppressor gene p35.3 50156 ChimerSeq STARFusion TCGA_RNA-Seq TUBB-TJP3 TUBB chr6 30688340 + TJP3 chr19 3738553 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 In-Frame Inter-chr p13.3 50157 ChimerSeq STARFusion TCGA_RNA-Seq UBE2W-TJP1 UBE2W chr8 74791043 - TJP1 chr15 30092905 - Exonic hg19 STAD TCGA-D7-8576-01A 2 0 In-Frame Inter-chr q21.11 50158 ChimerSeq STARFusion TCGA_RNA-Seq ZNF131-SKIV2L2 ZNF131 chr5 43123412 + SKIV2L2 chr5 54618155 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 Out-of-frame Intra-chr p12 Transcription factor q11.2 50159 ChimerSeq STARFusion TCGA_RNA-Seq ZNF850-TAF6 ZNF850 chr19 37252545 - TAF6 chr7 99711891 - Exonic hg19 STAD TCGA-D7-8576-01A 2 0 In-Frame Inter-chr q13.12 Transcription factor q22.1 50160 ChimerSeq STARFusion TCGA_RNA-Seq ZZEF1-RNPC3 ZZEF1 chr17 3990728 - RNPC3 chr1 104097656 + Exonic hg19 STAD TCGA-D7-8576-01A 2 0 CDS-3'UTR Inter-chr p13.2 p21.1 50161 ChimerSeq STARFusion TCGA_RNA-Seq ZNF271-MAPRE2 ZNF271 chr18 32871196 + MAPRE2 chr18 32706912 + Exonic hg19 STAD TCGA-BR-4369-01A 11 36 5'UTR-5'UTR Intra-chr q12.1 Seq+ 50162 ChimerSeq STARFusion TCGA_RNA-Seq SF3B1-HSPD1 SF3B1 chr2 198281465 - HSPD1 chr2 198362116 - Exonic hg19 STAD TCGA-BR-4369-01A 8 12 In-Frame Intra-chr q33.1 Oncogene q33.1 Tumor suppressor gene Seq+ 50163 ChimerSeq STARFusion TCGA_RNA-Seq CLIP1-TNIK CLIP1 chr12 122861936 - TNIK chr3 170908576 - Exonic hg19 STAD TCGA-BR-4369-01A 8 11 In-Frame Inter-chr q24.31 q26.31 STE:STE20 Seq+ 50164 ChimerSeq STARFusion TCGA_RNA-Seq RALGAPB-CIDECP RALGAPB chr20 37195875 + CIDECP chr3 10059755 - Exonic hg19 STAD TCGA-BR-4369-01A 7 8 CDS-3'UTR Inter-chr q11.23 p25.3 50165 ChimerSeq STARFusion TCGA_RNA-Seq NPEPPS-GGNBP2 NPEPPS chr17 45669911 + GGNBP2 chr17 34934413 + Exonic hg19 STAD TCGA-BR-4369-01A 6 9 Out-of-frame Intra-chr q21.32 Tumor suppressor gene 50166 ChimerSeq STARFusion TCGA_RNA-Seq SH3D21-PCGF3 SH3D21 chr1 36775191 + PCGF3 chr4 724419 + Exonic hg19 STAD TCGA-BR-4369-01A 6 5 CDS-5'UTR Inter-chr p34.3 p16.3 Seq+ 50167 ChimerSeq STARFusion TCGA_RNA-Seq RALGAPB-CIDECP RALGAPB chr20 37195875 + CIDECP chr3 10061475 - Exonic hg19 STAD TCGA-BR-4369-01A 3 8 CDS-3'UTR Inter-chr q11.23 p25.3 50168 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-ATG16L1 DGKD chr2 234299129 + ATG16L1 chr2 234186214 + Exonic hg19 STAD TCGA-BR-4369-01A 2 5 In-Frame Intra-chr Seq+ 50169 ChimerSeq STARFusion TCGA_RNA-Seq MYH11-FLNA MYH11 chr16 15809061 - FLNA chrX 153577265 - Exonic hg19 STAD TCGA-RD-A8N2-01A 3 25 Out-of-frame Inter-chr Oncogene q28 Tumor suppressor gene 50170 ChimerSeq STARFusion TCGA_RNA-Seq ACTG2-FLNA ACTG2 chr2 74146651 + FLNA chrX 153590628 - Exonic hg19 STAD TCGA-RD-A8N2-01A 3 10 Out-of-frame Inter-chr p13.1 q28 Tumor suppressor gene 50171 ChimerSeq STARFusion TCGA_RNA-Seq CDC6-JUP CDC6 chr17 38457860 + JUP chr17 39914036 - Exonic hg19 STAD TCGA-EQ-8122-01A 941 348 3'UTR-CDS Intra-chr q21.2 q21.2 Tumor suppressor gene Seq+ 50172 ChimerSeq STARFusion TCGA_RNA-Seq PRR11-SKA2 PRR11 chr17 57233166 + SKA2 chr17 57208728 - Exonic hg19 STAD TCGA-EQ-8122-01A 41 0 5'UTR-CDS Intra-chr q22 q22 Seq+ 50173 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-MIEN1 STARD3 chr17 37810003 + MIEN1 chr17 37886544 - Exonic hg19 STAD TCGA-EQ-8122-01A 37 14 Out-of-frame Intra-chr q12 q12 Seq+ 50174 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEFL1-GSDMA RAPGEFL1 chr17 38333362 + GSDMA chr17 38122564 + Exonic hg19 STAD TCGA-EQ-8122-01A 33 16 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 50175 ChimerSeq STARFusion TCGA_RNA-Seq PSMD3-CASC3 PSMD3 chr17 38146450 + CASC3 chr17 38318006 + Exonic hg19 STAD TCGA-EQ-8122-01A 24 9 In-Frame Intra-chr q21.1 q21.1 Seq+ 50176 ChimerSeq STARFusion TCGA_RNA-Seq EHBP1-CTNND2 EHBP1 chr2 62934430 + CTNND2 chr5 11732384 - Exonic hg19 STAD TCGA-EQ-8122-01A 20 3 Out-of-frame Inter-chr p15 p15.2 Seq+ 50177 ChimerSeq STARFusion TCGA_RNA-Seq HAP1-WIPF2 HAP1 chr17 39887745 - WIPF2 chr17 38439524 + Exonic hg19 STAD TCGA-EQ-8122-01A 18 10 CDS-3'UTR Intra-chr q21.2 q21.2 Seq+ 50178 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-WIPF2 GRB7 chr17 37902455 + WIPF2 chr17 38420742 + Exonic hg19 STAD TCGA-EQ-8122-01A 16 2 Out-of-frame Intra-chr q12 q21.2 Seq+ 50179 ChimerSeq STARFusion TCGA_RNA-Seq HAP1-CDC6 HAP1 chr17 39887745 - CDC6 chr17 38445660 + Exonic hg19 STAD TCGA-EQ-8122-01A 12 10 CDS-3'UTR Intra-chr q21.2 q21.2 Seq+ 50180 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-PSMD3 WIPF2 chr17 38421398 + PSMD3 chr17 38144936 + Exonic hg19 STAD TCGA-EQ-8122-01A 9 5 Out-of-frame Intra-chr q21.2 q21.1 Seq+ 50181 ChimerSeq STARFusion TCGA_RNA-Seq CDC6-CCR7 CDC6 chr17 38451708 + CCR7 chr17 38715194 - Exonic hg19 STAD TCGA-EQ-8122-01A 7 7 3'UTR-CDS Intra-chr q21.2 q21.2 Seq+ 50182 ChimerSeq STARFusion TCGA_RNA-Seq CDC6-CCR7 CDC6 chr17 38453019 + CCR7 chr17 38715194 - Exonic hg19 STAD TCGA-EQ-8122-01A 6 7 3'UTR-CDS Intra-chr q21.2 q21.2 Seq+ 50183 ChimerSeq STARFusion TCGA_RNA-Seq PTPRF-GUCA2B PTPRF chr1 44003948 + GUCA2B chr1 42620351 + Exonic hg19 STAD TCGA-EQ-8122-01A 7 2 5'UTR-CDS Intra-chr p34.2 p34.2 50184 ChimerSeq STARFusion TCGA_RNA-Seq HAP1-WIPF2 HAP1 chr17 39887890 - WIPF2 chr17 38439524 + Exonic hg19 STAD TCGA-EQ-8122-01A 4 10 CDS-3'UTR Intra-chr q21.2 q21.2 Seq+ 50185 ChimerSeq STARFusion TCGA_RNA-Seq MIEN1-KRT26 MIEN1 chr17 37885938 - KRT26 chr17 38923905 - Exonic hg19 STAD TCGA-EQ-8122-01A 4 1 Out-of-frame Intra-chr q12 q21.2 Seq+ 50186 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL1-ADCY9 RN7SL1 chr14 50053471 + ADCY9 chr16 4033924 - Exonic hg19 STAD TCGA-EQ-8122-01A 4 0 Out-of-frame Inter-chr q21.3 p13.3 50187 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-MIEN1 GRB7 chr17 37898541 + MIEN1 chr17 37886516 - Exonic hg19 STAD TCGA-EQ-8122-01A 3 3 Out-of-frame Intra-chr q12 q12 Seq+ 50188 ChimerSeq STARFusion TCGA_RNA-Seq KRT19-RAI14 KRT19 chr17 39680667 - RAI14 chr5 34656487 + Exonic hg19 STAD TCGA-EQ-8122-01A 3 0 Out-of-frame Inter-chr q21.2 Tumor suppressor gene p13.2 50189 ChimerSeq STARFusion TCGA_RNA-Seq MAN2B1-EVI5L MAN2B1 chr19 12774131 - EVI5L chr19 7913807 + Exonic hg19 STAD TCGA-EQ-8122-01A 3 0 In-Frame Intra-chr p13.13 p13.2 Seq+ 50190 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-PSMD3 GRB7 chr17 37902455 + PSMD3 chr17 38144936 + Exonic hg19 STAD TCGA-EQ-8122-01A 2 3 In-Frame Intra-chr q12 q21.1 50191 ChimerSeq STARFusion TCGA_RNA-Seq TPPP-BRD9 TPPP chr5 693393 - BRD9 chr5 880004 - Exonic hg19 STAD TCGA-EQ-8122-01A 2 1 5'UTR-CDS Intra-chr p15.33 p15.33 50192 ChimerSeq STARFusion TCGA_RNA-Seq ADARB2-RSU1 ADARB2 chr10 1779245 - RSU1 chr10 16737154 - Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 In-Frame Intra-chr p15.3 p13 50193 ChimerSeq STARFusion TCGA_RNA-Seq ATP11A-CUL4A ATP11A chr13 113530255 + CUL4A chr13 113917801 + Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 In-Frame Intra-chr q34 q34 Seq+ 50194 ChimerSeq STARFusion TCGA_RNA-Seq CALM1-GNB1 CALM1 chr14 90863577 + GNB1 chr1 1749314 - Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 In-Frame Inter-chr q32.11 p36.33 50195 ChimerSeq STARFusion TCGA_RNA-Seq CCDC34-SOCS5 CCDC34 chr11 27371879 - SOCS5 chr2 46985658 + Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 CDS-5'UTR Inter-chr p14.1 p21 50196 ChimerSeq STARFusion TCGA_RNA-Seq CENPE-DDX60L CENPE chr4 104115386 - DDX60L chr4 169327857 - Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 In-Frame Intra-chr q24 q32.3 50197 ChimerSeq STARFusion TCGA_RNA-Seq CWC27-KIAA0368 CWC27 chr5 64100213 + KIAA0368 chr9 114206774 - Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 Out-of-frame Inter-chr q12.3 q31.3 50198 ChimerSeq STARFusion TCGA_RNA-Seq DGAT1-HSF1 DGAT1 chr8 145550100 - HSF1 chr8 145533141 + Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 Out-of-frame Intra-chr q24.3 q24.3 Transcription factor 50199 ChimerSeq STARFusion TCGA_RNA-Seq DOCK4-VGLL4 DOCK4 chr7 111846157 - VGLL4 chr3 11643496 - Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 In-Frame Inter-chr q31.1 p25.2 50200 ChimerSeq STARFusion TCGA_RNA-Seq DYNC1LI2-NBR2 DYNC1LI2 chr16 66768121 - NBR2 chr17 41296745 + Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 CDS-5'UTR Inter-chr q22.1 q21.31 50201 ChimerSeq STARFusion TCGA_RNA-Seq EIF4A2-VIM EIF4A2 chr3 186505373 + VIM chr10 17278293 + Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 Out-of-frame Inter-chr q27.3 p13 Tumor suppressor gene 50202 ChimerSeq STARFusion TCGA_RNA-Seq ENC1-RBM4 ENC1 chr5 73936132 - RBM4 chr11 66407171 + Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 5'UTR-5'UTR Inter-chr q13.3 q13.2 Tumor suppressor gene 50203 ChimerSeq STARFusion TCGA_RNA-Seq FBXL8-ACADVL FBXL8 chr16 67195840 + ACADVL chr17 7127961 + Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 Out-of-frame Inter-chr q22.1 p13.1 50204 ChimerSeq STARFusion TCGA_RNA-Seq FBXL8-ANKLE2 FBXL8 chr16 67195840 + ANKLE2 chr12 133306856 - Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 Out-of-frame Inter-chr q22.1 q24.33 50205 ChimerSeq STARFusion TCGA_RNA-Seq FMNL2-REEP1 FMNL2 chr2 153192234 + REEP1 chr2 86509365 - Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 Out-of-frame Intra-chr q23.3 p11.2 50206 ChimerSeq STARFusion TCGA_RNA-Seq IKBIP-GOLM1 IKBIP chr12 99028074 - GOLM1 chr9 88661487 - Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 Out-of-frame Inter-chr q23.1 q21.33 50207 ChimerSeq STARFusion TCGA_RNA-Seq ITGA2-TNFAIP8 ITGA2 chr5 52382871 + TNFAIP8 chr5 118728511 + Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 Out-of-frame Intra-chr q11.2 q23.1 50208 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1598-SERPINB6 KIAA1598 chr10 118661276 - SERPINB6 chr6 2959576 - Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 CDS-5'UTR Inter-chr p25.2 50209 ChimerSeq STARFusion TCGA_RNA-Seq KIF3B-ANAPC4 KIF3B chr20 30904677 + ANAPC4 chr4 25390122 + Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 In-Frame Inter-chr q11.21 p15.2 50210 ChimerSeq STARFusion TCGA_RNA-Seq KNSTRN-HP1BP3 KNSTRN chr15 40679407 + HP1BP3 chr1 21100103 - Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 Out-of-frame Inter-chr q15.1 Oncogene p36.12 50211 ChimerSeq STARFusion TCGA_RNA-Seq LAMB3-LINC00674 LAMB3 chr1 209825714 - LINC00674 chr17 66110563 + Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 Out-of-frame Inter-chr q32.2 q24.2 50212 ChimerSeq STARFusion TCGA_RNA-Seq LAPTM4B-INHA LAPTM4B chr8 98837381 + INHA chr2 220439416 + Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 Out-of-frame Inter-chr q22.1 q35 50213 ChimerSeq STARFusion TCGA_RNA-Seq LINC00662-COG5 LINC00662 chr19 28283908 - COG5 chr7 107053077 - Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 Out-of-frame Inter-chr q11 50214 ChimerSeq STARFusion TCGA_RNA-Seq LINC00680-SP2 LINC00680 chr6 58285306 - SP2 chr17 45992678 + Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 Out-of-frame Inter-chr p11.2 q21.32 Transcription factor 50215 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K13-PLXND1 MAP3K13 chr3 185000815 + PLXND1 chr3 129286648 - Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 5'UTR-CDS Intra-chr q27.2 q22.1 Seq+ 50216 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-CPNE1 MATR3 chr5 138629461 + CPNE1 chr20 34220845 - Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 5'UTR-5'UTR Inter-chr q31.2 q11.22 50217 ChimerSeq STARFusion TCGA_RNA-Seq OPTN-C10orf76 OPTN chr10 13142302 + C10orf76 chr10 103799882 - Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 5'UTR-5'UTR Intra-chr p13 q24.32 50218 ChimerSeq STARFusion TCGA_RNA-Seq PITRM1-MAP3K7 PITRM1 chr10 3187788 - MAP3K7 chr6 91260268 - Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 In-Frame Inter-chr p15.2 q15 STE:STE11 Oncogene 50219 ChimerSeq STARFusion TCGA_RNA-Seq PLSCR1-RSRC1 PLSCR1 chr3 146262254 - RSRC1 chr3 157920861 + Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 5'UTR-CDS Intra-chr q24 Transcription factor q25.32 50220 ChimerSeq STARFusion TCGA_RNA-Seq PQLC1-CTDP1 PQLC1 chr18 77679184 - CTDP1 chr18 77513652 + Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 In-Frame Intra-chr q23 50221 ChimerSeq STARFusion TCGA_RNA-Seq PTPRN2-GTF2IRD1 PTPRN2 chr7 157873990 - GTF2IRD1 chr7 74004180 + Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 In-Frame Intra-chr q36.3 q11.23 Transcription factor 50222 ChimerSeq STARFusion TCGA_RNA-Seq PYGB-OVOL2 PYGB chr20 25229057 + OVOL2 chr20 17937681 - Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 CDS-3'UTR Intra-chr p11.21 p11.23 Transcription factor 50223 ChimerSeq STARFusion TCGA_RNA-Seq PYGB-SNX5 PYGB chr20 25229057 + SNX5 chr20 17937681 - Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 In-Frame Intra-chr p11.21 p11.23 50224 ChimerSeq STARFusion TCGA_RNA-Seq RALBP1-NAPG RALBP1 chr18 9475689 + NAPG chr18 10539759 + Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 5'UTR-CDS Intra-chr p11.22 p11.22 50225 ChimerSeq STARFusion TCGA_RNA-Seq RBFOX2-CPT1A RBFOX2 chr22 36334895 - CPT1A chr11 68571569 - Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 In-Frame Inter-chr q13.3 50226 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KA3-AUH RPS6KA3 chrX 20284682 - AUH chr9 94060358 - Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 Out-of-frame Inter-chr p22.12 q22.31 50227 ChimerSeq STARFusion TCGA_RNA-Seq SBF2-PDHX SBF2 chr11 10049999 - PDHX chr11 34978931 + Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 Out-of-frame Intra-chr p15.4 p13 50228 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-PTBP1 SBNO2 chr19 1174171 - PTBP1 chr19 803561 + Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 50229 ChimerSeq STARFusion TCGA_RNA-Seq SMYD3-GPATCH2 SMYD3 chr1 246490503 - GPATCH2 chr1 217604707 - Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 Out-of-frame Intra-chr q44 Transcription factor q41 50230 ChimerSeq STARFusion TCGA_RNA-Seq SNX9-STX7 SNX9 chr6 158244478 + STX7 chr6 132824727 - Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 CDS-5'UTR Intra-chr q25.3 q23.2 50231 ChimerSeq STARFusion TCGA_RNA-Seq TRIQK-PKP4 TRIQK chr8 93929157 - PKP4 chr2 159477502 + Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 In-Frame Inter-chr q22.1 q24.1 50232 ChimerSeq STARFusion TCGA_RNA-Seq UHRF1-PWWP2B UHRF1 chr19 4911050 + PWWP2B chr10 134230565 + Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 Out-of-frame Inter-chr p13.3 q26.3 50233 ChimerSeq STARFusion TCGA_RNA-Seq YIPF4-BIRC6 YIPF4 chr2 32503303 + BIRC6 chr2 32749955 + Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 In-Frame Intra-chr p22.3 p22.3 50234 ChimerSeq STARFusion TCGA_RNA-Seq YY1-MAPK1 YY1 chr14 100728803 + MAPK1 chr22 22162135 - Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 In-Frame Inter-chr q32.2 Transcription factor q11.22 Oncogene 50235 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC10-NPAS2 ZCCHC10 chr5 132342451 - NPAS2 chr2 101591920 + Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 Out-of-frame Inter-chr q31.1 q11.2 Tumor suppressor gene Transcription factor 50236 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC14-SVIL ZCCHC14 chr16 87445122 - SVIL chr10 29770657 - Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 Out-of-frame Inter-chr q24.2 p11.23 50237 ChimerSeq STARFusion TCGA_RNA-Seq ZNF292-RNGTT ZNF292 chr6 87865477 + RNGTT chr6 89324114 - Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 In-Frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q15 50238 ChimerSeq STARFusion TCGA_RNA-Seq ZNF30-LSM14A ZNF30 chr19 35418120 + LSM14A chr19 34712412 + Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 5'UTR-CDS Intra-chr q13.11 Transcription factor 50239 ChimerSeq STARFusion TCGA_RNA-Seq ZNF407-ITCH ZNF407 chr18 72493458 + ITCH chr20 33077071 + Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 In-Frame Inter-chr q22.3 Transcription factor q11.22 50240 ChimerSeq STARFusion TCGA_RNA-Seq PRELID2-GRXCR2 PRELID2 chr5 145197457 - GRXCR2 chr5 145246291 - Exonic hg19 STAD TCGA-IN-8663-01A 11 8 Out-of-frame Intra-chr q32 q32 50241 ChimerSeq STARFusion TCGA_RNA-Seq CASC1-LYRM5 CASC1 chr12 25348010 - LYRM5 chr12 25356854 + Exonic hg19 STAD TCGA-IN-8663-01A 7 11 5'UTR-5'UTR Intra-chr p12.1 Tumor suppressor gene Seq+ 50242 ChimerSeq STARFusion TCGA_RNA-Seq RPSAP52-HMGA2 RPSAP52 chr12 66220623 - HMGA2 chr12 66221781 + Exonic hg19 STAD TCGA-IN-8663-01A 4 10 3'UTR-CDS Intra-chr q14.3 q14.3 Transcription factor 50243 ChimerSeq STARFusion TCGA_RNA-Seq PRELID2-GRXCR2 PRELID2 chr5 145197457 - GRXCR2 chr5 145239478 - Exonic hg19 STAD TCGA-IN-8663-01A 4 8 Out-of-frame Intra-chr q32 q32 50244 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525073 - IGHG1 chr14 106209411 - Exonic hg19 STAD TCGA-BR-6457-01A 20 0 Out-of-frame Inter-chr q34 Oncogene q32.33 50245 ChimerSeq STARFusion TCGA_RNA-Seq USP48-WNT4 USP48 chr1 22062939 - WNT4 chr1 22448069 - Exonic hg19 STAD TCGA-CD-5804-01A 11 3 In-Frame Intra-chr p36.12 p36.12 Seq+ 50246 ChimerSeq STARFusion TCGA_RNA-Seq PDXDC1-NPIPA1 PDXDC1 chr16 15095713 + NPIPA1 chr16 15045472 + Exonic hg19 STAD TCGA-D7-8575-01A 65 192 Out-of-frame Intra-chr p13.11 50247 ChimerSeq STARFusion TCGA_RNA-Seq ETNK1-ITPR2 ETNK1 chr12 22826594 + ITPR2 chr12 26634174 - Exonic hg19 STAD TCGA-D7-8575-01A 58 19 In-Frame Intra-chr p12.1 p11.23 Seq+ 50248 ChimerSeq STARFusion TCGA_RNA-Seq ABHD17C-BHLHE41 ABHD17C chr15 80988360 + BHLHE41 chr12 26277515 - Exonic hg19 STAD TCGA-D7-8575-01A 16 14 Out-of-frame Inter-chr q25.1 p12.1 Tumor suppressor gene Transcription factor Seq+ 50249 ChimerSeq STARFusion TCGA_RNA-Seq NF2-CABP7 NF2 chr22 30000101 + CABP7 chr22 30125044 + Exonic hg19 STAD TCGA-D7-8575-01A 13 15 In-Frame Intra-chr q12.2 Oncogene Tumor suppressor gene q12.2 Seq+ 50250 ChimerSeq STARFusion TCGA_RNA-Seq NF2-CABP7 NF2 chr22 30000101 + CABP7 chr22 30124619 + Exonic hg19 STAD TCGA-D7-8575-01A 11 15 Out-of-frame Intra-chr q12.2 Oncogene Tumor suppressor gene q12.2 Seq+ 50251 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-HCFC2 IGH@ chr14 106993812 - HCFC2 chr12 104476603 + Exonic hg19 STAD TCGA-D7-8575-01A 13 0 Out-of-frame Inter-chr 32.33 q23.3 50252 ChimerSeq STARFusion TCGA_RNA-Seq ZNF655-POMZP3 ZNF655 chr7 99158318 + POMZP3 chr7 76247617 - Exonic hg19 STAD TCGA-D7-8575-01A 10 9 Out-of-frame Intra-chr q22.1 Transcription factor 50253 ChimerSeq STARFusion TCGA_RNA-Seq FLNB-SLMAP FLNB chr3 57994583 + SLMAP chr3 57882238 + Exonic hg19 STAD TCGA-D7-8575-01A 9 6 In-Frame Intra-chr p14.3 p14.3 Seq+ 50254 ChimerSeq STARFusion TCGA_RNA-Seq ZNF655-POMZP3 ZNF655 chr7 99158318 + POMZP3 chr7 76247932 - Exonic hg19 STAD TCGA-D7-8575-01A 5 9 Out-of-frame Intra-chr q22.1 Transcription factor 50255 ChimerSeq STARFusion TCGA_RNA-Seq VCL-ADK VCL chr10 75758133 + ADK chr10 76349040 + Exonic hg19 STAD TCGA-VQ-A8DT-01A 36 18 In-Frame Intra-chr q22.2 q22.2 Seq+ 50256 ChimerSeq STARFusion TCGA_RNA-Seq VCL-ADK VCL chr10 75758133 + ADK chr10 76285014 + Exonic hg19 STAD TCGA-VQ-A8DT-01A 31 18 In-Frame Intra-chr q22.2 q22.2 Seq+ 50257 ChimerSeq STARFusion TCGA_RNA-Seq MECOM-LRRC34 MECOM chr3 169098975 - LRRC34 chr3 169521969 - Exonic hg19 STAD TCGA-VQ-A8DT-01A 11 5 In-Frame Intra-chr q26.2 Transcription factor q26.2 Seq+ 50258 ChimerSeq STARFusion TCGA_RNA-Seq HIST1H4I-BCL6 HIST1H4I chr6 27107109 + BCL6 chr3 187452695 - Exonic hg19 STAD TCGA-CD-8531-01A 195 6 CDS-5'UTR Inter-chr p22.1 q27.3 Oncogene Transcription factor Seq+ 50259 ChimerSeq STARFusion TCGA_RNA-Seq SNORD3A-UNC5B SNORD3A chr17 19091453 + UNC5B chr10 73050759 + Exonic hg19 STAD TCGA-CD-8531-01A 26 0 Out-of-frame Inter-chr p11.2 q22.1 Tumor suppressor gene 50260 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-ZNF705E FCHSD2 chr11 72851076 - ZNF705E chr11 71532593 - Exonic hg19 STAD TCGA-CD-8531-01A 20 5 Out-of-frame Intra-chr q13.4 q13.4 Transcription factor Seq+ 50261 ChimerSeq STARFusion TCGA_RNA-Seq DIP2B-PRELID1 DIP2B chr12 50898807 + PRELID1 chr5 176730833 + Exonic hg19 STAD TCGA-CD-8531-01A 13 0 Out-of-frame Inter-chr q13.12 q35.3 Seq+ 50262 ChimerSeq STARFusion TCGA_RNA-Seq TKT-DOCK3 TKT chr3 53289852 - DOCK3 chr3 50971412 + Exonic hg19 STAD TCGA-CD-8531-01A 3 6 In-Frame Intra-chr p21.1 Tumor suppressor gene p21.2 50263 ChimerSeq STARFusion TCGA_RNA-Seq TKT-DOCK3 TKT chr3 53289852 - DOCK3 chr3 50927457 + Exonic hg19 STAD TCGA-CD-8531-01A 3 6 Out-of-frame Intra-chr p21.1 Tumor suppressor gene p21.2 50264 ChimerSeq STARFusion TCGA_RNA-Seq NIF3L1-ADD1 NIF3L1 chr2 201761922 + ADD1 chr4 2845615 + Exonic hg19 STAD TCGA-CD-8531-01A 3 0 Out-of-frame Inter-chr q33.1 p16.3 50265 ChimerSeq STARFusion TCGA_RNA-Seq SPPL3-RALY SPPL3 chr12 121341648 - RALY chr20 32659872 + Exonic hg19 STAD TCGA-CD-8531-01A 3 0 CDS-5'UTR Inter-chr q24.31 q11.22 50266 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF1-KLK1 ARHGEF1 chr19 42400555 + KLK1 chr19 51323699 - Exonic hg19 STAD TCGA-CD-8531-01A 2 1 In-Frame Intra-chr q13.2 q13.33 50267 ChimerSeq STARFusion TCGA_RNA-Seq EEF1D-PTP4A3 EEF1D chr8 144679518 - PTP4A3 chr8 142441027 + Exonic hg19 STAD TCGA-CD-8531-01A 2 1 5'UTR-CDS Intra-chr q24.3 50268 ChimerSeq STARFusion TCGA_RNA-Seq NCOA3-KLK1 NCOA3 chr20 46130763 + KLK1 chr19 51323699 - Exonic hg19 STAD TCGA-CD-8531-01A 2 1 5'UTR-CDS Inter-chr q13.12 Transcription factor q13.33 50269 ChimerSeq STARFusion TCGA_RNA-Seq ALG13-IGKC ALG13 chrX 110928331 + IGKC chr2 89157196 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 Out-of-frame Inter-chr q23 p11.2 50270 ChimerSeq STARFusion TCGA_RNA-Seq ARFGEF2-PCED1B ARFGEF2 chr20 47606221 + PCED1B chr12 47628790 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 Out-of-frame Inter-chr q13.13 q13.11 50271 ChimerSeq STARFusion TCGA_RNA-Seq ATF7IP-DERA ATF7IP chr12 14518761 + DERA chr12 16109870 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 5'UTR-CDS Intra-chr p13.1 p12.3 50272 ChimerSeq STARFusion TCGA_RNA-Seq BRD8-HDAC3 BRD8 chr5 137513260 - HDAC3 chr5 141009692 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Intra-chr q31.2 q31.3 Tumor suppressor gene 50273 ChimerSeq STARFusion TCGA_RNA-Seq C16orf74-COX4I1 C16orf74 chr16 85768796 - COX4I1 chr16 85834811 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 CDS-5'UTR Intra-chr q24.1 q24.1 50274 ChimerSeq STARFusion TCGA_RNA-Seq C1orf63-POLR2A C1orf63 chr1 25571641 - POLR2A chr17 7402358 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Inter-chr p13.1 50275 ChimerSeq STARFusion TCGA_RNA-Seq CCDC23-UBA1 CCDC23 chr1 43282102 - UBA1 chrX 47058202 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 CDS-5'UTR Inter-chr p11.3 50276 ChimerSeq STARFusion TCGA_RNA-Seq CD180-MST4 CD180 chr5 66492380 - MST4 chrX 131197461 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Inter-chr q12.3 STE:STE20 50277 ChimerSeq STARFusion TCGA_RNA-Seq CD97-IGKC CD97 chr19 14501891 + IGKC chr2 89157196 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 Out-of-frame Inter-chr p11.2 50278 ChimerSeq STARFusion TCGA_RNA-Seq CHKB-TMEM138 CHKB chr22 51020678 - TMEM138 chr11 61136069 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 Out-of-frame Inter-chr q13.33 q12.2 50279 ChimerSeq STARFusion TCGA_RNA-Seq CRYZ-LSM14A CRYZ chr1 75198640 - LSM14A chr19 34685383 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 5'UTR-CDS Inter-chr p31.1 50280 ChimerSeq STARFusion TCGA_RNA-Seq CSNK2A1-NFATC2 CSNK2A1 chr20 524316 - NFATC2 chr20 50140649 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 5'UTR-CDS Intra-chr p13 Oncogene q13.2 Tumor suppressor gene Transcription factor 50281 ChimerSeq STARFusion TCGA_RNA-Seq DCTN1-SH3GLB2 DCTN1 chr2 74589179 - SH3GLB2 chr9 131784702 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Inter-chr p13.1 q34.11 50282 ChimerSeq STARFusion TCGA_RNA-Seq DCUN1D1-PARL DCUN1D1 chr3 182698275 - PARL chr3 183562114 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 Out-of-frame Intra-chr q26.33 Oncogene q27.1 50283 ChimerSeq STARFusion TCGA_RNA-Seq DLEU2-KPNA3 DLEU2 chr13 50699438 - KPNA3 chr13 50321129 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 3'UTR-CDS Intra-chr q14.2 Tumor suppressor gene q14.2 50284 ChimerSeq STARFusion TCGA_RNA-Seq DOPEY1-CYB5R4 DOPEY1 chr6 83777498 + CYB5R4 chr6 84603241 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 5'UTR-CDS Intra-chr q14.1 q14.2 Seq+ 50285 ChimerSeq STARFusion TCGA_RNA-Seq ELF1-EZR ELF1 chr13 41556119 - EZR chr6 159210403 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Inter-chr q14.11 Transcription factor q25.3 50286 ChimerSeq STARFusion TCGA_RNA-Seq FAM49B-SFPQ FAM49B chr8 130983189 - SFPQ chr1 35643637 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 3'UTR-3'UTR Inter-chr q24.21 p34.3 50287 ChimerSeq STARFusion TCGA_RNA-Seq GDI2-SYPL1 GDI2 chr10 5855177 - SYPL1 chr7 105752657 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Inter-chr p15.1 q22.3 50288 ChimerSeq STARFusion TCGA_RNA-Seq GEMIN6-C1orf61 GEMIN6 chr2 39006260 + C1orf61 chr1 156374393 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 Out-of-frame Inter-chr p22.1 q22 50289 ChimerSeq STARFusion TCGA_RNA-Seq GPC5-VPS36 GPC5 chr13 92797242 + VPS36 chr13 52990228 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 Out-of-frame Intra-chr q31.3 Tumor suppressor gene q14.3 50290 ChimerSeq STARFusion TCGA_RNA-Seq GRAMD4-E4F1 GRAMD4 chr22 47022858 + E4F1 chr16 2278373 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 Out-of-frame Inter-chr q13.31 p13.3 Transcription factor 50291 ChimerSeq STARFusion TCGA_RNA-Seq GSN-GNG2 GSN chr9 124043840 + GNG2 chr14 52417368 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 5'UTR-5'UTR Inter-chr q33.2 Tumor suppressor gene q22.1 50292 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPM-EEF2K HNRNPM chr19 8532468 + EEF2K chr16 22284947 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Inter-chr p13.2 p12.2 50293 ChimerSeq STARFusion TCGA_RNA-Seq HSP90B1-ACVR1B HSP90B1 chr12 104337652 + ACVR1B chr12 52380602 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Intra-chr q23.3 Tumor suppressor gene q13.13 Oncogene 50294 ChimerSeq STARFusion TCGA_RNA-Seq IGF2R-QKI IGF2R chr6 160412355 + QKI chr6 163876311 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Intra-chr q25.3 Oncogene Tumor suppressor gene q26 Seq+ 50295 ChimerSeq STARFusion TCGA_RNA-Seq IGLL5-NPLOC4 IGLL5 chr22 23230439 + NPLOC4 chr17 79539114 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 Out-of-frame Inter-chr q11.22 q25.3 50296 ChimerSeq STARFusion TCGA_RNA-Seq IGLL5-WDR91 IGLL5 chr22 23230439 + WDR91 chr7 134894507 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 Out-of-frame Inter-chr q11.22 q33 50297 ChimerSeq STARFusion TCGA_RNA-Seq ITPR2-STK38L ITPR2 chr12 26985623 - STK38L chr12 27450643 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 CDS-5'UTR Intra-chr p11.23 p11.23 50298 ChimerSeq STARFusion TCGA_RNA-Seq ITPR3-SNX14 ITPR3 chr6 33623664 + SNX14 chr6 86235955 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Intra-chr p21.31 q14.3 50299 ChimerSeq STARFusion TCGA_RNA-Seq KCTD3-ASPM KCTD3 chr1 215741111 + ASPM chr1 197074315 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 Out-of-frame Intra-chr q41 q31.3 50300 ChimerSeq STARFusion TCGA_RNA-Seq KHDC1-PALLD KHDC1 chr6 74001721 - PALLD chr4 169798874 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 CDS-5'UTR Inter-chr q13 q32.3 50301 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1524-C11orf73 KIAA1524 chr3 108303912 - C11orf73 chr11 86048421 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Inter-chr q13.13 50302 ChimerSeq STARFusion TCGA_RNA-Seq LAPTM4A-DENR LAPTM4A chr2 20251171 - DENR chr12 123238240 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 CDS-5'UTR Inter-chr p24.1 q24.31 50303 ChimerSeq STARFusion TCGA_RNA-Seq LINC00106-GBF1 LINC00106 chrY 1466117 + GBF1 chr10 104122232 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 Out-of-frame Inter-chr p22.33 q24.32 50304 ChimerSeq STARFusion TCGA_RNA-Seq LMNA-PPP1R18 LMNA chr1 156076614 + PPP1R18 chr6 30647166 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 5'UTR-CDS Inter-chr q22 p21.33 50305 ChimerSeq STARFusion TCGA_RNA-Seq LRRC58-CREBZF LRRC58 chr3 120053709 - CREBZF chr11 85371641 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 CDS-3'UTR Inter-chr q13.33 q14.1 Transcription factor 50306 ChimerSeq STARFusion TCGA_RNA-Seq MAML3-RFTN1 MAML3 chr4 141074014 - RFTN1 chr3 16475544 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 Out-of-frame Inter-chr q31.1 p24.3 50307 ChimerSeq STARFusion TCGA_RNA-Seq MGST3-TMCO1 MGST3 chr1 165600530 + TMCO1 chr1 165712548 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 5'UTR-CDS Intra-chr q24.1 q24.1 50308 ChimerSeq STARFusion TCGA_RNA-Seq MIR29B1-DHX36 MIR29B1 chr7 130596869 - DHX36 chr3 154033952 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 5'UTR-CDS Inter-chr q32.3 Tumor suppressor gene 50309 ChimerSeq STARFusion TCGA_RNA-Seq MYO1E-SRP9 MYO1E chr15 59664697 - SRP9 chr1 225965637 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 CDS-5'UTR Inter-chr q22.2 q42.12 50310 ChimerSeq STARFusion TCGA_RNA-Seq NCOA3-ZMYND8 NCOA3 chr20 46130763 + ZMYND8 chr20 45923523 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.12 50311 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-FYN NIPBL chr5 36877280 + FYN chr6 111995833 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 5'UTR-CDS Inter-chr p13.2 q21 TK:Src 50312 ChimerSeq STARFusion TCGA_RNA-Seq NOL12-SEPT9 NOL12 chr22 38147835 + SEPT9 chr17 75478226 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 3'UTR-CDS Inter-chr q13.1 50313 ChimerSeq STARFusion TCGA_RNA-Seq NOP58-TRAPPC12 NOP58 chr2 203130709 + TRAPPC12 chr2 3461392 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Intra-chr q33.1 50314 ChimerSeq STARFusion TCGA_RNA-Seq NXN-N4BP2L2 NXN chr17 767255 - N4BP2L2 chr13 33095586 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Inter-chr p13.3 q13.1 50315 ChimerSeq STARFusion TCGA_RNA-Seq ORC4-EPC2 ORC4 chr2 148778177 - EPC2 chr2 149447783 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 5'UTR-CDS Intra-chr q23.1 q23.1 50316 ChimerSeq STARFusion TCGA_RNA-Seq PAFAH1B2-ST14 PAFAH1B2 chr11 117015134 + ST14 chr11 130058009 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 5'UTR-CDS Intra-chr q23.3 q24.3 50317 ChimerSeq STARFusion TCGA_RNA-Seq PAG1-RAB11FIP1 PAG1 chr8 82023826 - RAB11FIP1 chr8 37720631 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 5'UTR-CDS Intra-chr q21.13 p11.23 50318 ChimerSeq STARFusion TCGA_RNA-Seq PDCD6IP-NGLY1 PDCD6IP chr3 33870461 + NGLY1 chr3 25792754 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Intra-chr p22.3 p24.2 50319 ChimerSeq STARFusion TCGA_RNA-Seq PDCD7-MCAM PDCD7 chr15 65421370 - MCAM chr11 119183659 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Inter-chr q22.31 q23.3 50320 ChimerSeq STARFusion TCGA_RNA-Seq POLR2J3-KLHL42 POLR2J3 chr7 102207444 - KLHL42 chr12 27950648 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 Out-of-frame Inter-chr q22.1 p11.22 50321 ChimerSeq STARFusion TCGA_RNA-Seq POLR2J3-MTX2 POLR2J3 chr7 102207444 - MTX2 chr2 177161588 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 3'UTR-CDS Inter-chr q22.1 q31.1 50322 ChimerSeq STARFusion TCGA_RNA-Seq POU2AF1-RTF1 POU2AF1 chr11 111228170 - RTF1 chr15 41772779 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 Out-of-frame Inter-chr q23.1 Transcription factor q15.1 50323 ChimerSeq STARFusion TCGA_RNA-Seq PPME1-ELP3 PPME1 chr11 73882567 + ELP3 chr8 27987019 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Inter-chr q13.4 p21.1 50324 ChimerSeq STARFusion TCGA_RNA-Seq PPP6C-TAF1B PPP6C chr9 127933364 - TAF1B chr2 10059170 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 Out-of-frame Inter-chr q33.3 p25.1 50325 ChimerSeq STARFusion TCGA_RNA-Seq PSMB7-PTBP3 PSMB7 chr9 127146877 - PTBP3 chr9 115060196 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Intra-chr q33.3 q32 50326 ChimerSeq STARFusion TCGA_RNA-Seq PSMD9-RBBP7 PSMD9 chr12 122326900 + RBBP7 chrX 16870998 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 Out-of-frame Inter-chr q24.31 p22.2 Tumor suppressor gene 50327 ChimerSeq STARFusion TCGA_RNA-Seq RAC2-OAZ1 RAC2 chr22 37627271 - OAZ1 chr19 2271384 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Inter-chr q13.1 p13.3 50328 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF1-STRBP RAPGEF1 chr9 134615157 - STRBP chr9 125946577 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 5'UTR-5'UTR Intra-chr q34.13 q33.3 50329 ChimerSeq STARFusion TCGA_RNA-Seq RASSF3-NECAP2 RASSF3 chr12 65004523 + NECAP2 chr1 16778333 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Inter-chr q14.2 Tumor suppressor gene p36.13 50330 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-CD52 RCC1 chr1 28835417 + CD52 chr1 26646662 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 5'UTR-CDS Intra-chr p35.3 p36.11 50331 ChimerSeq STARFusion TCGA_RNA-Seq RPS25-GBF1 RPS25 chr11 118888668 - GBF1 chr10 104140263 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Inter-chr q24.32 50332 ChimerSeq STARFusion TCGA_RNA-Seq SCARNA17-RPL23A SCARNA17 chr18 47340432 + RPL23A chr17 27047725 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 5'UTR-CDS Inter-chr q21.1 q11.2 50333 ChimerSeq STARFusion TCGA_RNA-Seq SFT2D1-CAP1 SFT2D1 chr6 166741764 - CAP1 chr1 40537122 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Inter-chr q27 p34.2 50334 ChimerSeq STARFusion TCGA_RNA-Seq SLC16A3-PTBP1 SLC16A3 chr17 80186405 + PTBP1 chr19 799413 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 5'UTR-CDS Inter-chr q25.3 p13.3 50335 ChimerSeq STARFusion TCGA_RNA-Seq SNHG8-CDC25A SNHG8 chr4 119200292 + CDC25A chr3 48219478 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 5'UTR-CDS Inter-chr q26 p21.31 50336 ChimerSeq STARFusion TCGA_RNA-Seq SNRPN-UBE3A SNRPN chr15 25207356 + UBE3A chr15 25585375 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 5'UTR-CDS Intra-chr q11.2 q11.2 50337 ChimerSeq STARFusion TCGA_RNA-Seq SNURF-UBE3A SNURF chr15 25207356 + UBE3A chr15 25585375 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Intra-chr q11.2 q11.2 50338 ChimerSeq STARFusion TCGA_RNA-Seq SNURF-UBE3A SNURF chr15 25207356 + UBE3A chr15 25585375 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Intra-chr q11.2 q11.2 50339 ChimerSeq STARFusion TCGA_RNA-Seq SPRED1-FAM98B SPRED1 chr15 38591748 + FAM98B chr15 38762428 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 Out-of-frame Intra-chr q14 q14 50340 ChimerSeq STARFusion TCGA_RNA-Seq TFEB-CCDC167 TFEB chr6 41691199 - CCDC167 chr6 37452970 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 5'UTR-CDS Intra-chr p21.1 Transcription factor p21.2 50341 ChimerSeq STARFusion TCGA_RNA-Seq THRAP3-SFPQ THRAP3 chr1 36690106 + SFPQ chr1 35643637 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 5'UTR-3'UTR Intra-chr p34.3 p34.3 50342 ChimerSeq STARFusion TCGA_RNA-Seq TMEM223-FERMT3 TMEM223 chr11 62559151 - FERMT3 chr11 63978083 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Intra-chr q12.3 q13.1 50343 ChimerSeq STARFusion TCGA_RNA-Seq TMX3-PROSER1 TMX3 chr18 66377258 - PROSER1 chr13 39591681 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Inter-chr q22.1 q13.3 50344 ChimerSeq STARFusion TCGA_RNA-Seq TPM4-TCF3 TPM4 chr19 16187507 + TCF3 chr19 1650286 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 CDS-5'UTR Intra-chr p13.12 p13.3 Oncogene Tumor suppressor gene Transcription factor 50345 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC11-C9orf78 TRAPPC11 chr4 184615876 + C9orf78 chr9 132590531 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 Out-of-frame Inter-chr q35.1 q34.11 50346 ChimerSeq STARFusion TCGA_RNA-Seq TRIOBP-SEPT9 TRIOBP chr22 38147835 + SEPT9 chr17 75478226 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 Out-of-frame Inter-chr q13.1 50347 ChimerSeq STARFusion TCGA_RNA-Seq UBE2W-SLA UBE2W chr8 74791043 - SLA chr8 134087375 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 CDS-5'UTR Intra-chr q21.11 q24.22 50348 ChimerSeq STARFusion TCGA_RNA-Seq UNC119-SIPA1L1 UNC119 chr17 26879356 - SIPA1L1 chr14 71880665 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 CDS-5'UTR Inter-chr q11.2 q24.2 50349 ChimerSeq STARFusion TCGA_RNA-Seq VTI1A-HNRNPUL1 VTI1A chr10 114298089 + HNRNPUL1 chr19 41774128 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Inter-chr q25.2 q13.2 50350 ChimerSeq STARFusion TCGA_RNA-Seq WDYHV1-ETF1 WDYHV1 chr8 124449574 + ETF1 chr5 137849395 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 Out-of-frame Inter-chr q24.13 q31.2 50351 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H13-DBNDD2 ZC3H13 chr13 46626539 - DBNDD2 chr20 44037100 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 5'UTR-5'UTR Inter-chr q14.13 q13.12 50352 ChimerSeq STARFusion TCGA_RNA-Seq ZNF140-DDHD2 ZNF140 chr12 133657658 + DDHD2 chr8 38090505 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 5'UTR-5'UTR Inter-chr q24.33 Transcription factor p11.23 50353 ChimerSeq STARFusion TCGA_RNA-Seq ZNF182-DERA ZNF182 chrX 47861994 - DERA chr12 16109870 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 Out-of-frame Inter-chr p11.23 Transcription factor p12.3 50354 ChimerSeq STARFusion TCGA_RNA-Seq ZNF292-AKIRIN2 ZNF292 chr6 87928449 + AKIRIN2 chr6 88391481 - Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q15 Seq+ 50355 ChimerSeq STARFusion TCGA_RNA-Seq ZNF420-CABIN1 ZNF420 chr19 37498984 + CABIN1 chr22 24451336 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 5'UTR-CDS Inter-chr q13.12 Transcription factor 50356 ChimerSeq STARFusion TCGA_RNA-Seq ZNF630-DERA ZNF630 chrX 47861994 - DERA chr12 16109870 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 3'UTR-CDS Inter-chr p11.23 Transcription factor p12.3 50357 ChimerSeq STARFusion TCGA_RNA-Seq ZNF804A-PSMD14 ZNF804A chr2 185463797 + PSMD14 chr2 162223989 + Exonic hg19 STAD TCGA-CD-8531-01A 2 0 In-Frame Intra-chr q32.1 Transcription factor q24.2 50358 ChimerSeq STARFusion TCGA_RNA-Seq CLDN18-ARHGAP26 CLDN18 chr3 137749947 + ARHGAP26 chr5 142393645 + Exonic hg19 STAD TCGA-BR-8384-01A 5 4 In-Frame Inter-chr q22.3 q31.3 KB Pub Seq+ 50359 ChimerSeq STARFusion TCGA_RNA-Seq REREP1Y-OFD1P10Y REREP1Y chrY 25608682 + OFD1P10Y chrY 25732847 + Exonic hg19 STAD TCGA-BR-8384-01A 5 4 Out-of-frame Intra-chr q11.223 q11.223 50360 ChimerSeq STARFusion TCGA_RNA-Seq HSP90AB1-MYH11 HSP90AB1 chr6 44218074 + MYH11 chr16 15815477 - Exonic hg19 STAD TCGA-BR-8384-01A 3 5 Out-of-frame Inter-chr p21.1 Oncogene Oncogene 50361 ChimerSeq STARFusion TCGA_RNA-Seq NAA15-RAB33B NAA15 chr4 140272765 + RAB33B chr4 140393840 + Exonic hg19 STAD TCGA-D7-8572-01A 21 8 In-Frame Intra-chr q31.1 q31.1 50362 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142481912 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-D7-8572-01A 17 0 3'UTR-CDS Inter-chr q13.41 50363 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142460418 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-D7-8572-01A 16 0 In-Frame Inter-chr q13.41 50364 ChimerSeq STARFusion TCGA_RNA-Seq POLG-FANCI POLG chr15 89876327 - FANCI chr15 89828327 + Exonic hg19 STAD TCGA-D7-A6F2-01A 34 6 Out-of-frame Intra-chr q26.1 q26.1 Seq+ 50365 ChimerSeq STARFusion TCGA_RNA-Seq REG1A-DDX52 REG1A chr2 79350526 + DDX52 chr17 35985986 - Exonic hg19 STAD TCGA-D7-A6F2-01A 35 0 Out-of-frame Inter-chr p12 q12 50366 ChimerSeq STARFusion TCGA_RNA-Seq RAB3IP-BEST3 RAB3IP chr12 70195501 + BEST3 chr12 70093129 - Exonic hg19 STAD TCGA-D7-A6F2-01A 13 7 CDS-5'UTR Intra-chr q15 q15 Seq+ 50367 ChimerSeq STARFusion TCGA_RNA-Seq RAB3IP-BEST3 RAB3IP chr12 70194117 + BEST3 chr12 70093129 - Exonic hg19 STAD TCGA-D7-A6F2-01A 11 7 CDS-5'UTR Intra-chr q15 q15 Seq+ 50368 ChimerSeq STARFusion TCGA_RNA-Seq MTATP6P1-MTND2P28 MTATP6P1 chr1 569567 + MTND2P28 chr1 565736 + Exonic hg19 STAD TCGA-D7-A6F2-01A 4 8 Out-of-frame Intra-chr p36.33 p36.33 50369 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-COL2A1 IGL@ chr22 23063637 + COL2A1 chr12 48396803 - Exonic hg19 STAD TCGA-BR-6852-01A 45 0 Out-of-frame Inter-chr q11.22 q13.11 50370 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-KHDC3L IGL@ chr22 23063635 + KHDC3L chr6 74072609 + Exonic hg19 STAD TCGA-BR-6852-01A 38 0 Out-of-frame Inter-chr q11.22 q13 50371 ChimerSeq STARFusion TCGA_RNA-Seq SPPL3-KNTC1 SPPL3 chr12 121341648 - KNTC1 chr12 123102890 + Exonic hg19 STAD TCGA-BR-6852-01A 32 0 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 50372 ChimerSeq STARFusion TCGA_RNA-Seq NDST2-IGH@ NDST2 chr10 75567950 - IGH@ chr14 106330467 - Exonic hg19 STAD TCGA-BR-6852-01A 27 0 Out-of-frame Inter-chr q22.2 32.33 50373 ChimerSeq STARFusion TCGA_RNA-Seq NDST2-IGHG3 NDST2 chr10 75567950 - IGHG3 chr14 106330467 - Exonic hg19 STAD TCGA-BR-6852-01A 27 0 Out-of-frame Inter-chr q22.2 50374 ChimerSeq STARFusion TCGA_RNA-Seq NDST2-IGHJ4 NDST2 chr10 75567950 - IGHJ4 chr14 106330467 - Exonic hg19 STAD TCGA-BR-6852-01A 27 0 Out-of-frame Inter-chr q22.2 50375 ChimerSeq STARFusion TCGA_RNA-Seq SPPL3-KNTC1 SPPL3 chr12 121341648 - KNTC1 chr12 123103029 + Exonic hg19 STAD TCGA-BR-6852-01A 13 0 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 50376 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128841404 - RSPO3 chr6 127469793 + Exonic hg19 STAD TCGA-VQ-AA68-01A 246 75 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 50377 ChimerSeq STARFusion TCGA_RNA-Seq CCSER1-SPARCL1 CCSER1 chr4 91389505 + SPARCL1 chr4 88394955 - Exonic hg19 STAD TCGA-VQ-AA68-01A 14 2 Out-of-frame Intra-chr q22.1 q22.1 Tumor suppressor gene Seq+ 50378 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC20-SPATA13 ZDHHC20 chr13 21987791 - SPATA13 chr13 24796957 + Exonic hg19 STAD TCGA-VQ-AA68-01A 11 5 CDS-5'UTR Intra-chr q12.11 q12.12 Seq+ 50379 ChimerSeq STARFusion TCGA_RNA-Seq CDKAL1-FARS2 CDKAL1 chr6 21065459 + FARS2 chr6 5771524 + Exonic hg19 STAD TCGA-VQ-AA68-01A 11 2 Out-of-frame Intra-chr p22.3 p25.1 50380 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL2-TNFAIP2 RN7SL2 chr14 50329518 - TNFAIP2 chr14 103602903 + Exonic hg19 STAD TCGA-VQ-AA68-01A 7 6 Out-of-frame Intra-chr q21.3 q32.32 50381 ChimerSeq STARFusion TCGA_RNA-Seq MUC3A-PCOLCE MUC3A chr7 100610642 + PCOLCE chr7 100199919 + Exonic hg19 STAD TCGA-CD-A486-01A 199 36 Out-of-frame Intra-chr q22.1 q22.1 50382 ChimerSeq STARFusion TCGA_RNA-Seq EP300-TNRC6B EP300 chr22 41489102 + TNRC6B chr22 40642019 + Exonic hg19 STAD TCGA-CD-A486-01A 80 23 Out-of-frame Intra-chr q13.2 Oncogene q13.1 Seq+ 50383 ChimerSeq STARFusion TCGA_RNA-Seq SNORD3A-UNC5B SNORD3A chr17 19091453 + UNC5B chr10 73050759 + Exonic hg19 STAD TCGA-CD-A486-01A 84 0 Out-of-frame Inter-chr p11.2 q22.1 Tumor suppressor gene 50384 ChimerSeq STARFusion TCGA_RNA-Seq MINK1-SPNS3 MINK1 chr17 4736935 + SPNS3 chr17 4381867 + Exonic hg19 STAD TCGA-CD-A486-01A 57 12 In-Frame Intra-chr p13.2 p13.2 Seq+ 50385 ChimerSeq STARFusion TCGA_RNA-Seq HBP1-SLC26A5 HBP1 chr7 106809472 + SLC26A5 chr7 103019782 - Exonic hg19 STAD TCGA-CD-A486-01A 44 7 In-Frame Intra-chr Tumor suppressor gene Transcription factor q22.1 Seq+ 50386 ChimerSeq STARFusion TCGA_RNA-Seq CASC3-CDK12 CASC3 chr17 38297860 + CDK12 chr17 37680927 + Exonic hg19 STAD TCGA-CD-A486-01A 25 7 Out-of-frame Intra-chr q21.1 q12 Oncogene Seq+ 50387 ChimerSeq STARFusion TCGA_RNA-Seq HBP1-SLC26A5 HBP1 chr7 106809630 + SLC26A5 chr7 103019782 - Exonic hg19 STAD TCGA-CD-A486-01A 25 7 5'UTR-CDS Intra-chr Tumor suppressor gene Transcription factor q22.1 Seq+ 50388 ChimerSeq STARFusion TCGA_RNA-Seq SMAD3-IL17RA SMAD3 chr15 67358698 + IL17RA chr22 17577952 + Exonic hg19 STAD TCGA-CD-A486-01A 18 6 Out-of-frame Inter-chr q22.33 Transcription factor q11.1 Seq+ 50389 ChimerSeq STARFusion TCGA_RNA-Seq TAF15-CDKN1C TAF15 chr17 34142232 + CDKN1C chr11 2906724 - Exonic hg19 STAD TCGA-CD-A486-01A 17 10 Out-of-frame Inter-chr q12 Tumor suppressor gene 50390 ChimerSeq STARFusion TCGA_RNA-Seq LMNA-DAP3 LMNA chr1 156052975 + DAP3 chr1 155707948 + Exonic hg19 STAD TCGA-CD-A486-01A 17 2 5'UTR-CDS Intra-chr q22 q22 Seq+ 50391 ChimerSeq STARFusion TCGA_RNA-Seq TPTEP1-EIF4EBP1 TPTEP1 chr22 17083105 + EIF4EBP1 chr8 37914599 + Exonic hg19 STAD TCGA-CD-A486-01A 13 6 5'UTR-CDS Inter-chr q11.1 p11.23 50392 ChimerSeq STARFusion TCGA_RNA-Seq LARP4B-ADARB2 LARP4B chr10 930387 - ADARB2 chr10 1421355 - Exonic hg19 STAD TCGA-CD-A486-01A 9 1 Out-of-frame Intra-chr p15.3 p15.3 Seq+ 50393 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC10-AGPAT3 TRAPPC10 chr21 45432441 + AGPAT3 chr21 45397927 + Exonic hg19 STAD TCGA-CD-A486-01A 9 0 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 50394 ChimerSeq STARFusion TCGA_RNA-Seq RBM41-NUP62CL RBM41 chrX 106356626 - NUP62CL chrX 106418422 - Exonic hg19 STAD TCGA-CD-A486-01A 6 1 Out-of-frame Intra-chr q22.3 q22.3 50395 ChimerSeq STARFusion TCGA_RNA-Seq CASC3-THRA CASC3 chr17 38297860 + THRA chr17 38230445 + Exonic hg19 STAD TCGA-CD-A486-01A 6 0 CDS-5'UTR Intra-chr q21.1 q21.1 Tumor suppressor gene Transcription factor Seq+ 50396 ChimerSeq STARFusion TCGA_RNA-Seq TAF15-CDKN1C TAF15 chr17 34136580 + CDKN1C chr11 2905364 - Exonic hg19 STAD TCGA-CD-A486-01A 3 10 In-Frame Inter-chr q12 Tumor suppressor gene 50397 ChimerSeq STARFusion TCGA_RNA-Seq PDZD8-EMX2OS PDZD8 chr10 119100491 - EMX2OS chr10 119232933 - Exonic hg19 STAD TCGA-CD-A486-01A 5 1 CDS-3'UTR Intra-chr q26.11 q26.11 50398 ChimerSeq STARFusion TCGA_RNA-Seq NSUN2-SRP9P1 NSUN2 chr5 6599363 - SRP9P1 chr10 93565829 - Exonic hg19 STAD TCGA-CD-A486-01A 5 0 Out-of-frame Inter-chr p15.31 q23.32 50399 ChimerSeq STARFusion TCGA_RNA-Seq MTND6P4-COL1A1 MTND6P4 chr5 134259923 + COL1A1 chr17 48266585 - Exonic hg19 STAD TCGA-CD-A486-01A 4 2 Out-of-frame Inter-chr q31.1 q21.33 Oncogene 50400 ChimerSeq STARFusion TCGA_RNA-Seq CATSPER2P1-LCMT2 CATSPER2P1 chr15 44029165 - LCMT2 chr15 43620677 - Exonic hg19 STAD TCGA-CD-A486-01A 4 1 Out-of-frame Intra-chr q15.3 q15.3 50401 ChimerSeq STARFusion TCGA_RNA-Seq RBM41-NUP62CL RBM41 chrX 106358582 - NUP62CL chrX 106418423 - Exonic hg19 STAD TCGA-CD-A486-01A 4 1 CDS-5'UTR Intra-chr q22.3 q22.3 50402 ChimerSeq STARFusion TCGA_RNA-Seq CROT-RPTN CROT chr7 87011859 + RPTN chr1 152130385 - Exonic hg19 STAD TCGA-CD-A486-01A 4 0 CDS-5'UTR Inter-chr q21.12 q21.3 50403 ChimerSeq STARFusion TCGA_RNA-Seq GTF2F1-EMR4P GTF2F1 chr19 6383322 - EMR4P chr19 6981226 - Exonic hg19 STAD TCGA-CD-A486-01A 4 0 CDS-3'UTR Intra-chr p13.3 50404 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL5P-ADCY9 RN7SL5P chr9 9442233 + ADCY9 chr16 4033924 - Exonic hg19 STAD TCGA-CD-A486-01A 4 0 Out-of-frame Inter-chr p23 p13.3 50405 ChimerSeq STARFusion TCGA_RNA-Seq CNN3-LINC01057 CNN3 chr1 95392394 - LINC01057 chr1 95171113 - Exonic hg19 STAD TCGA-CD-A486-01A 2 7 Out-of-frame Intra-chr p21.3 50406 ChimerSeq STARFusion TCGA_RNA-Seq CNN3-LINC01057 CNN3 chr1 95392394 - LINC01057 chr1 95145163 - Exonic hg19 STAD TCGA-CD-A486-01A 2 7 Out-of-frame Intra-chr p21.3 50407 ChimerSeq STARFusion TCGA_RNA-Seq CNN3-LINC01057 CNN3 chr1 95392394 - LINC01057 chr1 95197993 - Exonic hg19 STAD TCGA-CD-A486-01A 2 7 Out-of-frame Intra-chr p21.3 50408 ChimerSeq STARFusion TCGA_RNA-Seq AKAP9-MYH9 AKAP9 chr7 91630658 + MYH9 chr22 36722666 - Exonic hg19 STAD TCGA-CD-A486-01A 3 0 Out-of-frame Inter-chr q21.2 Oncogene q12.3 Oncogene Tumor suppressor gene 50409 ChimerSeq STARFusion TCGA_RNA-Seq ASXL1-LFNG ASXL1 chr20 30956926 + LFNG chr7 2566780 + Exonic hg19 STAD TCGA-CD-A486-01A 3 0 Out-of-frame Inter-chr q11.21 Oncogene Tumor suppressor gene p22.3 50410 ChimerSeq STARFusion TCGA_RNA-Seq CABLES2-IGH@ CABLES2 chr20 60981971 - IGH@ chr14 106054731 - Exonic hg19 STAD TCGA-CD-A486-01A 3 0 Out-of-frame Inter-chr q13.33 32.33 50411 ChimerSeq STARFusion TCGA_RNA-Seq CABLES2-IGHA2 CABLES2 chr20 60981971 - IGHA2 chr14 106054731 - Exonic hg19 STAD TCGA-CD-A486-01A 3 0 Out-of-frame Inter-chr q13.33 50412 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPA3-HEBP2 HNRNPA3 chr2 178077599 + HEBP2 chr6 138725513 + Exonic hg19 STAD TCGA-CD-A486-01A 3 0 CDS-5'UTR Inter-chr q31.2 q24.1 50413 ChimerSeq STARFusion TCGA_RNA-Seq JUND-RPS29 JUND chr19 18390816 - RPS29 chr14 50050353 - Exonic hg19 STAD TCGA-CD-A486-01A 3 0 Out-of-frame Inter-chr p13.11 Transcription factor q21.3 50414 ChimerSeq STARFusion TCGA_RNA-Seq PMAIP1-ATP5EP2 PMAIP1 chr18 57571528 + ATP5EP2 chr13 28519701 + Exonic hg19 STAD TCGA-CD-A486-01A 3 0 Out-of-frame Inter-chr q21.32 q12.2 50415 ChimerSeq STARFusion TCGA_RNA-Seq SMIM3-NDST1 SMIM3 chr5 150158534 + NDST1 chr5 149900430 + Exonic hg19 STAD TCGA-CD-A486-01A 3 0 Out-of-frame Intra-chr q33.1 q33.1 50416 ChimerSeq STARFusion TCGA_RNA-Seq SPCS1-SNORA7 SPCS1 chr3 52742176 + SNORA7 chr14 75178736 + Exonic hg19 STAD TCGA-CD-A486-01A 3 0 Out-of-frame Inter-chr p21.1 q24.3 50417 ChimerSeq STARFusion TCGA_RNA-Seq SSBP3-AR SSBP3 chr1 54871734 - AR chrX 66766373 + Exonic hg19 STAD TCGA-CD-A486-01A 3 0 Out-of-frame Inter-chr p32.3 q12 Oncogene Tumor suppressor gene Transcription factor 50418 ChimerSeq STARFusion TCGA_RNA-Seq PPM1A-STK3 PPM1A chr14 60716395 + STK3 chr8 99608397 - Exonic hg19 STAD TCGA-CD-A486-01A 2 2 5'UTR-CDS Inter-chr q23.1 Tumor suppressor gene q22.2 50419 ChimerSeq STARFusion TCGA_RNA-Seq TMED3-KIAA1024 TMED3 chr15 79606347 + KIAA1024 chr15 79748440 + Exonic hg19 STAD TCGA-CD-A486-01A 2 1 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 50420 ChimerSeq STARFusion TCGA_RNA-Seq ARL15-ZNF723 ARL15 chr5 53409032 - ZNF723 chr19 23039920 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 Out-of-frame Inter-chr q11.2 p12 50421 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V1B2-INTS10 ATP6V1B2 chr8 20068827 + INTS10 chr8 19677084 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 Out-of-frame Intra-chr p21.3 p21.3 50422 ChimerSeq STARFusion TCGA_RNA-Seq ATXN2-GK ATXN2 chr12 112036588 - GK chrX 30742218 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 Out-of-frame Inter-chr q24.12 p21.2 50423 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT5-ZFAS1 B4GALT5 chr20 48330113 - ZFAS1 chr20 47905582 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 Out-of-frame Intra-chr q13.13 q13.13 Tumor suppressor gene 50424 ChimerSeq STARFusion TCGA_RNA-Seq BCL2L13-GART BCL2L13 chr22 18121652 + GART chr21 34900641 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 5'UTR-CDS Inter-chr q11.21 50425 ChimerSeq STARFusion TCGA_RNA-Seq C1orf63-AQR C1orf63 chr1 25571641 - AQR chr15 35155242 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 Out-of-frame Inter-chr q14 50426 ChimerSeq STARFusion TCGA_RNA-Seq C1orf63-TMEM50A C1orf63 chr1 25663531 - TMEM50A chr1 25669452 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 5'UTR-CDS Intra-chr p36.11 50427 ChimerSeq STARFusion TCGA_RNA-Seq C7orf50-CSNK1G2 C7orf50 chr7 1067894 - CSNK1G2 chr19 1969507 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 CDS-5'UTR Inter-chr p22.3 p13.3 50428 ChimerSeq STARFusion TCGA_RNA-Seq CDK14-PUM2 CDK14 chr7 90547039 + PUM2 chr2 20483247 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 In-Frame Inter-chr q21.13 p24.1 50429 ChimerSeq STARFusion TCGA_RNA-Seq CTBP1-GAK CTBP1 chr4 1242704 - GAK chr4 898567 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 In-Frame Intra-chr p16.3 p16.3 Other:NAK 50430 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-SKI CTTN chr11 70281225 + SKI chr1 2234417 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 Out-of-frame Inter-chr q13.3 p36.33 Transcription factor 50431 ChimerSeq STARFusion TCGA_RNA-Seq DMXL2-SLC9A1 DMXL2 chr15 51827860 - SLC9A1 chr1 27429803 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 In-Frame Inter-chr q21.2 p36.11 50432 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC1-MLLT10 DNAJC1 chr10 22094909 - MLLT10 chr10 22002701 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 Out-of-frame Intra-chr p12.31 p12.31 Oncogene 50433 ChimerSeq STARFusion TCGA_RNA-Seq DOCK1-C5orf63 DOCK1 chr10 128926028 + C5orf63 chr5 126388361 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 In-Frame Inter-chr q26.2 q23.2 50434 ChimerSeq STARFusion TCGA_RNA-Seq EFNA1-KIAA0196 EFNA1 chr1 155106256 + KIAA0196 chr8 126040949 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 Out-of-frame Inter-chr q22 50435 ChimerSeq STARFusion TCGA_RNA-Seq EIF3H-BLVRB EIF3H chr8 117738255 - BLVRB chr19 40964452 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 In-Frame Inter-chr q24.11 q13.2 50436 ChimerSeq STARFusion TCGA_RNA-Seq EIF4A2-SMG8 EIF4A2 chr3 186504062 + SMG8 chr17 57292166 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 In-Frame Inter-chr q27.3 q22 50437 ChimerSeq STARFusion TCGA_RNA-Seq FAM208B-PICALM FAM208B chr10 5727138 + PICALM chr11 85742653 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 5'UTR-5'UTR Inter-chr p15.1 q14.2 50438 ChimerSeq STARFusion TCGA_RNA-Seq FARP1-PABPC1 FARP1 chr13 99030172 + PABPC1 chr8 101725409 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 In-Frame Inter-chr q32.2 q22.3 50439 ChimerSeq STARFusion TCGA_RNA-Seq FBLN1-PRKAR1B FBLN1 chr22 45972988 + PRKAR1B chr7 619014 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 In-Frame Inter-chr q13.31 Tumor suppressor gene p22.3 50440 ChimerSeq STARFusion TCGA_RNA-Seq FRMD5-ALDH1A3 FRMD5 chr15 44487151 - ALDH1A3 chr15 101425472 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 In-Frame Intra-chr q15.3 q26.3 50441 ChimerSeq STARFusion TCGA_RNA-Seq FTCD-CSNK1E FTCD chr21 47562023 - CSNK1E chr22 38690540 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 Out-of-frame Inter-chr q13.1 50442 ChimerSeq STARFusion TCGA_RNA-Seq GLA-ARHGAP4 GLA chrX 100656221 - ARHGAP4 chrX 153198037 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 Out-of-frame Intra-chr q22.1 q28 50443 ChimerSeq STARFusion TCGA_RNA-Seq GLA-NAA10 GLA chrX 100656221 - NAA10 chrX 153198037 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 Out-of-frame Intra-chr q22.1 q28 50444 ChimerSeq STARFusion TCGA_RNA-Seq HNF4A-ZBTB1 HNF4A chr20 42984493 + ZBTB1 chr14 64988205 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 CDS-5'UTR Inter-chr q13.12 Tumor suppressor gene Transcription factor q23.3 Transcription factor 50445 ChimerSeq STARFusion TCGA_RNA-Seq IFI27-CTBP1 IFI27 chr14 94577143 + CTBP1 chr4 1235307 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 5'UTR-5'UTR Inter-chr q32.12 p16.3 50446 ChimerSeq STARFusion TCGA_RNA-Seq IGSF9B-CCDC84 IGSF9B chr11 133814115 - CCDC84 chr11 118881474 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 Out-of-frame Intra-chr q25 50447 ChimerSeq STARFusion TCGA_RNA-Seq INF2-ARID3A INF2 chr14 105168093 + ARID3A chr19 964248 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 In-Frame Inter-chr q32.33 p13.3 Transcription factor 50448 ChimerSeq STARFusion TCGA_RNA-Seq IQCE-SLC22A20 IQCE chr7 2627511 + SLC22A20 chr11 65006133 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 CDS-5'UTR Inter-chr p22.3 q13.1 50449 ChimerSeq STARFusion TCGA_RNA-Seq ISOC1-SNCAIP ISOC1 chr5 128430768 + SNCAIP chr5 121726784 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 CDS-5'UTR Intra-chr q23.3 q23.2 50450 ChimerSeq STARFusion TCGA_RNA-Seq ITCH-CLHC1 ITCH chr20 32951155 + CLHC1 chr2 55408880 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 Out-of-frame Inter-chr q11.22 p16.1 50451 ChimerSeq STARFusion TCGA_RNA-Seq LRRC27-BIVM LRRC27 chr10 134158154 + BIVM chr13 103473387 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 Out-of-frame Inter-chr q26.3 q33.1 50452 ChimerSeq STARFusion TCGA_RNA-Seq MAEA-ARL6IP6 MAEA chr4 1283770 + ARL6IP6 chr2 153577047 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 Out-of-frame Inter-chr p16.3 q23.3 50453 ChimerSeq STARFusion TCGA_RNA-Seq MAN2B1-RALBP1 MAN2B1 chr19 12769038 - RALBP1 chr18 9512989 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 CDS-5'UTR Inter-chr p13.13 p11.22 50454 ChimerSeq STARFusion TCGA_RNA-Seq MROH1-DCTD MROH1 chr8 145202979 + DCTD chr4 183836728 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 Out-of-frame Inter-chr q24.3 q35.1 50455 ChimerSeq STARFusion TCGA_RNA-Seq MTA3-ATXN2 MTA3 chr2 42806340 + ATXN2 chr12 111908546 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 In-Frame Inter-chr p21 q24.12 50456 ChimerSeq STARFusion TCGA_RNA-Seq NAA15-SKP1 NAA15 chr4 140222985 + SKP1 chr5 133509713 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 CDS-5'UTR Inter-chr q31.1 q31.1 50457 ChimerSeq STARFusion TCGA_RNA-Seq NT5DC3-FBXW8 NT5DC3 chr12 104234727 - FBXW8 chr12 117365828 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 Out-of-frame Intra-chr q23.3 q24.22 50458 ChimerSeq STARFusion TCGA_RNA-Seq NUP85-RMDN1 NUP85 chr17 73201889 + RMDN1 chr8 87498872 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 Out-of-frame Inter-chr q25.1 q21.3 50459 ChimerSeq STARFusion TCGA_RNA-Seq NUP88-PAFAH1B1 NUP88 chr17 5292122 - PAFAH1B1 chr17 2585023 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 Out-of-frame Intra-chr p13.2 p13.3 Tumor suppressor gene 50460 ChimerSeq STARFusion TCGA_RNA-Seq PAK4-PAPL PAK4 chr19 39616559 + PAPL chr19 39575732 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 5'UTR-5'UTR Intra-chr q13.2 STE:STE20 50461 ChimerSeq STARFusion TCGA_RNA-Seq PANK4-SKI PANK4 chr1 2457903 - SKI chr1 2234417 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 Out-of-frame Intra-chr p36.32 p36.33 Transcription factor 50462 ChimerSeq STARFusion TCGA_RNA-Seq PDHA1-NPHP3 PDHA1 chrX 19371291 + NPHP3 chr3 132410130 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 In-Frame Inter-chr p22.12 q22.1 50463 ChimerSeq STARFusion TCGA_RNA-Seq PIGZ-FYTTD1 PIGZ chr3 196678692 - FYTTD1 chr3 197495310 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 In-Frame Intra-chr q29 q29 50464 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA4-DHDH PLEKHA4 chr19 49344406 - DHDH chr19 49438257 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 In-Frame Intra-chr q13.33 q13.33 50465 ChimerSeq STARFusion TCGA_RNA-Seq PNISR-ASCC3 PNISR chr6 99873091 - ASCC3 chr6 101054964 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 5'UTR-CDS Intra-chr q16.2 q16.3 Seq+ 50466 ChimerSeq STARFusion TCGA_RNA-Seq POLR2J3-GTF2E2 POLR2J3 chr7 102207444 - GTF2E2 chr8 30437913 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 3'UTR-CDS Inter-chr q22.1 p12 50467 ChimerSeq STARFusion TCGA_RNA-Seq PRKCA-OLA1 PRKCA chr17 64302245 + OLA1 chr2 175006728 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 In-Frame Inter-chr q24.2 q31.1 50468 ChimerSeq STARFusion TCGA_RNA-Seq RAC1-CKAP5 RAC1 chr7 6431672 + CKAP5 chr11 46792532 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 In-Frame Inter-chr p22.1 Oncogene p11.2 50469 ChimerSeq STARFusion TCGA_RNA-Seq RBM10-AKAP8L RBM10 chrX 47006897 + AKAP8L chr19 15491423 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 Out-of-frame Inter-chr p11.3 p13.12 Transcription factor 50470 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-ZDHHC3 RCC1 chr1 28832596 + ZDHHC3 chr3 45000952 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 5'UTR-5'UTR Inter-chr p35.3 50471 ChimerSeq STARFusion TCGA_RNA-Seq RNF121-GMPS RNF121 chr11 71671937 + GMPS chr3 155611307 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 In-Frame Inter-chr q13.4 q25.31 50472 ChimerSeq STARFusion TCGA_RNA-Seq RNF19B-ADC RNF19B chr1 33429652 - ADC chr1 33558846 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 Out-of-frame Intra-chr p35.1 50473 ChimerSeq STARFusion TCGA_RNA-Seq SEC16A-ZCCHC7 SEC16A chr9 139342536 - ZCCHC7 chr9 37305541 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 In-Frame Intra-chr q34.3 p13.2 50474 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L1-CLK4 SIPA1L1 chr14 71996087 + CLK4 chr5 178050417 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 5'UTR-5'UTR Inter-chr q24.2 q35.3 CMGC:CLK 50475 ChimerSeq STARFusion TCGA_RNA-Seq SLC35D2-SREK1 SLC35D2 chr9 99145759 - SREK1 chr5 65455047 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 Out-of-frame Inter-chr q22.32 q12.3 50476 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-ZDHHC3 SNHG3 chr1 28832596 + ZDHHC3 chr3 45000952 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 5'UTR-5'UTR Inter-chr p35.3 50477 ChimerSeq STARFusion TCGA_RNA-Seq SPNS2-DENND1A SPNS2 chr17 4416607 + DENND1A chr9 126439068 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 Out-of-frame Inter-chr p13.2 q33.3 50478 ChimerSeq STARFusion TCGA_RNA-Seq SYNE2-EIF5 SYNE2 chr14 64644201 + EIF5 chr14 103806764 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 In-Frame Intra-chr q23.2 q32.32 50479 ChimerSeq STARFusion TCGA_RNA-Seq TAP2-PSMD14 TAP2 chr6 32802931 - PSMD14 chr2 162265348 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 In-Frame Inter-chr q24.2 50480 ChimerSeq STARFusion TCGA_RNA-Seq TAP2-PSMD14 TAP2 chr6 32802931 - PSMD14 chr2 162265348 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 In-Frame Inter-chr q24.2 50481 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D2B-GGPS1 TBC1D2B chr15 78369635 - GGPS1 chr1 235498557 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 CDS-5'UTR Inter-chr q25.1 q42.3 50482 ChimerSeq STARFusion TCGA_RNA-Seq THRA-MXI1 THRA chr17 38219345 + MXI1 chr10 111987947 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 5'UTR-5'UTR Inter-chr q21.1 Tumor suppressor gene Transcription factor q25.2 Tumor suppressor gene Transcription factor 50483 ChimerSeq STARFusion TCGA_RNA-Seq TNS3-HNRNPC TNS3 chr7 47436397 - HNRNPC chr14 21699231 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 In-Frame Inter-chr p12.3 q11.2 50484 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-BCL2L1 TPX2 chr20 30327424 + BCL2L1 chr20 30310133 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 5'UTR-5'UTR Intra-chr q11.21 q11.21 Oncogene 50485 ChimerSeq STARFusion TCGA_RNA-Seq VPS8-RERE VPS8 chr3 184530013 + RERE chr1 8426034 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 5'UTR-5'UTR Inter-chr q27.2 p36.23 50486 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC14-JPX ZDHHC14 chr6 157803298 + JPX chrX 73218603 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 CDS-5'UTR Inter-chr q25.3 q13.2 50487 ChimerSeq STARFusion TCGA_RNA-Seq ZNF106-CAPN3 ZNF106 chr15 42710003 - CAPN3 chr15 42700409 + Exonic hg19 STAD TCGA-CD-A486-01A 2 0 Out-of-frame Intra-chr q15.1 q15.1 50488 ChimerSeq STARFusion TCGA_RNA-Seq ZNF33B-HNRNPD ZNF33B chr10 43133922 - HNRNPD chr4 83280792 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 5'UTR-CDS Inter-chr q11.21 Transcription factor q21.22 50489 ChimerSeq STARFusion TCGA_RNA-Seq ZNF33B-HNRNPD ZNF33B chr10 43133922 - HNRNPD chr4 83280792 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 5'UTR-CDS Inter-chr q11.21 Transcription factor q21.22 50490 ChimerSeq STARFusion TCGA_RNA-Seq ZSCAN5A-AMACR ZSCAN5A chr19 56879578 - AMACR chr5 34006004 - Exonic hg19 STAD TCGA-CD-A486-01A 2 0 5'UTR-CDS Inter-chr q13.43 Transcription factor p13.2 50491 ChimerSeq STARFusion TCGA_RNA-Seq CNOT1-PRRX2 CNOT1 chr16 58619242 - PRRX2 chr9 132481510 + Exonic hg19 STAD TCGA-CD-A487-01A 51 18 Out-of-frame Inter-chr q21 q34.11 Transcription factor Seq+ 50492 ChimerSeq STARFusion TCGA_RNA-Seq CXADR-C21orf37 CXADR chr21 18919511 + C21orf37 chr21 18821183 + Exonic hg19 STAD TCGA-CD-A487-01A 24 8 CDS-5'UTR Intra-chr q21.1 50493 ChimerSeq STARFusion TCGA_RNA-Seq RNF20-LPPR1 RNF20 chr9 104297834 + LPPR1 chr9 104032162 + Exonic hg19 STAD TCGA-CD-A487-01A 17 0 In-Frame Intra-chr q31.1 Seq+ 50494 ChimerSeq STARFusion TCGA_RNA-Seq INTS12-PPA2 INTS12 chr4 106629795 - PPA2 chr4 106377902 - Exonic hg19 STAD TCGA-CD-A487-01A 14 0 5'UTR-CDS Intra-chr q24 q24 Seq+ 50495 ChimerSeq STARFusion TCGA_RNA-Seq C11orf58-OR7E14P C11orf58 chr11 16776568 + OR7E14P chr11 17035536 + Exonic hg19 STAD TCGA-CD-A487-01A 13 2 Out-of-frame Intra-chr p15.2 p15.1 50496 ChimerSeq STARFusion TCGA_RNA-Seq RNF169-POLD3 RNF169 chr11 74528759 + POLD3 chr11 74379822 + Exonic hg19 STAD TCGA-CD-A487-01A 11 3 CDS-3'UTR Intra-chr q13.4 q13.4 Seq+ 50497 ChimerSeq STARFusion TCGA_RNA-Seq CASP8-NDUFB3 CASP8 chr2 202098835 + NDUFB3 chr2 201950182 + Exonic hg19 STAD TCGA-CD-A487-01A 10 2 5'UTR-CDS Intra-chr q33.1 Oncogene Tumor suppressor gene q33.1 50498 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A6-TANGO6 SLC7A6 chr16 68309152 + TANGO6 chr16 69007931 + Exonic hg19 STAD TCGA-CD-A487-01A 9 6 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 50499 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB8OS-SYNC ZBTB8OS chr1 33116034 - SYNC chr1 33149983 - Exonic hg19 STAD TCGA-CD-A487-01A 7 4 Out-of-frame Intra-chr p35.1 p35.1 Seq+ 50500 ChimerSeq STARFusion TCGA_RNA-Seq GRAMD4-TBC1D22A GRAMD4 chr22 47069711 + TBC1D22A chr22 47432967 + Exonic hg19 STAD TCGA-CD-A487-01A 6 5 In-Frame Intra-chr q13.31 q13.31 Seq+ 50501 ChimerSeq STARFusion TCGA_RNA-Seq USP31-GGA2 USP31 chr16 23083366 - GGA2 chr16 23500030 - Exonic hg19 STAD TCGA-CD-A487-01A 6 5 In-Frame Intra-chr p12.2 p12.2 Seq+ 50502 ChimerSeq STARFusion TCGA_RNA-Seq TIMM23B-LINC00843 TIMM23B chr10 51387763 + LINC00843 chr10 51732772 + Exonic hg19 STAD TCGA-VQ-AA69-01A 39 9 Out-of-frame Intra-chr q11.23 q11.23 50503 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-ADSL TNRC6B chr22 40574144 + ADSL chr22 40754868 + Exonic hg19 STAD TCGA-VQ-AA69-01A 29 4 In-Frame Intra-chr q13.1 q13.1 Seq+ 50504 ChimerSeq STARFusion TCGA_RNA-Seq TCF20-CYP2D6 TCF20 chr22 42739485 - CYP2D6 chr22 42524946 - Exonic hg19 STAD TCGA-VQ-AA69-01A 17 6 5'UTR-CDS Intra-chr Transcription factor Oncogene Seq+ 50505 ChimerSeq STARFusion TCGA_RNA-Seq TPSAB1-PRSS27 TPSAB1 chr16 1291991 + PRSS27 chr16 2762815 - Exonic hg19 STAD TCGA-VQ-AA69-01A 18 0 In-Frame Intra-chr p13.3 p13.3 50506 ChimerSeq STARFusion TCGA_RNA-Seq TCF20-CYP2D6 TCF20 chr22 42739485 - CYP2D6 chr22 42538640 - Exonic hg19 STAD TCGA-VQ-AA69-01A 10 6 Out-of-frame Intra-chr Transcription factor Oncogene Seq+ 50507 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-ADSL TNRC6B chr22 40552186 + ADSL chr22 40754868 + Exonic hg19 STAD TCGA-VQ-AA69-01A 9 4 In-Frame Intra-chr q13.1 q13.1 Seq+ 50508 ChimerSeq STARFusion TCGA_RNA-Seq MTG1-GPR123 MTG1 chr10 135216277 + GPR123 chr10 134940737 + Exonic hg19 STAD TCGA-HU-A4H0-01A 26 2 In-Frame Intra-chr q26.3 50509 ChimerSeq STARFusion TCGA_RNA-Seq MFSD6-INPP1 MFSD6 chr2 191334581 + INPP1 chr2 191235631 + Exonic hg19 STAD TCGA-HU-A4H0-01A 18 1 Out-of-frame Intra-chr q32.2 q32.2 Seq+ 50510 ChimerSeq STARFusion TCGA_RNA-Seq C16orf70-PDP2 C16orf70 chr16 67154097 + PDP2 chr16 66920450 + Exonic hg19 STAD TCGA-HU-A4H0-01A 14 0 CDS-3'UTR Intra-chr q22.1 q22.1 50511 ChimerSeq STARFusion TCGA_RNA-Seq CHMP4B-EDEM2 CHMP4B chr20 32399464 + EDEM2 chr20 33703736 - Exonic hg19 STAD TCGA-BR-7723-01A 74 3 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 50512 ChimerSeq STARFusion TCGA_RNA-Seq RANGAP1-HECTD4 RANGAP1 chr22 41670604 - HECTD4 chr12 112646434 - Exonic hg19 STAD TCGA-BR-7723-01A 20 4 Out-of-frame Inter-chr q13.2 q24.13 Seq+ 50513 ChimerSeq STARFusion TCGA_RNA-Seq ABCC1-DLGAP1 ABCC1 chr16 16043656 + DLGAP1 chr18 3582246 - Exonic hg19 STAD TCGA-BR-7723-01A 19 1 Out-of-frame Inter-chr p11.31 Seq+ 50514 ChimerSeq STARFusion TCGA_RNA-Seq TMEM116-RANGAP1 TMEM116 chr12 112450806 - RANGAP1 chr22 41664160 - Exonic hg19 STAD TCGA-BR-7723-01A 15 0 5'UTR-CDS Inter-chr q24.13 q13.2 Seq+ 50515 ChimerSeq STARFusion TCGA_RNA-Seq RNF169-POLD3 RNF169 chr11 74500744 + POLD3 chr11 74322544 + Exonic hg19 STAD TCGA-BR-7723-01A 13 3 In-Frame Intra-chr q13.4 q13.4 Seq+ 50516 ChimerSeq STARFusion TCGA_RNA-Seq COMMD7-MMP24 COMMD7 chr20 31315700 - MMP24 chr20 33851594 + Exonic hg19 STAD TCGA-BR-7723-01A 11 4 In-Frame Intra-chr q11.21 q11.22 Seq+ 50517 ChimerSeq STARFusion TCGA_RNA-Seq RNF5-AIF1 RNF5 chr6 32146428 + AIF1 chr6 31583298 + Exonic hg19 STAD TCGA-BR-7723-01A 10 1 Out-of-frame Intra-chr Tumor suppressor gene 50518 ChimerSeq STARFusion TCGA_RNA-Seq SHANK2-CNTN6 SHANK2 chr11 70858166 - CNTN6 chr3 1320097 + Exonic hg19 STAD TCGA-BR-7723-01A 9 2 Out-of-frame Inter-chr q13.4 p26.3 Seq+ 50519 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC11-WWC2 TRAPPC11 chr4 184607901 + WWC2 chr4 184201929 + Exonic hg19 STAD TCGA-BR-7723-01A 8 2 In-Frame Intra-chr q35.1 q35.1 Seq+ 50520 ChimerSeq STARFusion TCGA_RNA-Seq COMMD7-MMP24 COMMD7 chr20 31315700 - MMP24 chr20 33855008 + Exonic hg19 STAD TCGA-BR-7723-01A 5 4 In-Frame Intra-chr q11.21 q11.22 Seq+ 50521 ChimerSeq STARFusion TCGA_RNA-Seq RPL14-SRP14 RPL14 chr3 40503505 + SRP14 chr15 40328595 - Exonic hg19 STAD TCGA-BR-7723-01A 3 6 Out-of-frame Inter-chr p22.1 q15.1 50522 ChimerSeq STARFusion TCGA_RNA-Seq PTOV1-CA10 PTOV1 chr19 50361910 + CA10 chr17 49825178 - Exonic hg19 STAD TCGA-D7-6818-01A 90 4 In-Frame Inter-chr q13.33 q22 Seq+ 50523 ChimerSeq STARFusion TCGA_RNA-Seq PSMD13-OR4G4P PSMD13 chr11 247448 + OR4G4P chr1 53282 + Exonic hg19 STAD TCGA-D7-6818-01A 44 1 Out-of-frame Inter-chr p15.5 Seq+ 50524 ChimerSeq STARFusion TCGA_RNA-Seq AGAP1-NAA35 AGAP1 chr2 236659132 + NAA35 chr9 88611314 + Exonic hg19 STAD TCGA-D7-6818-01A 36 0 In-Frame Inter-chr q37.2 q21.33 Seq+ 50525 ChimerSeq STARFusion TCGA_RNA-Seq STXBP5-SAMD5 STXBP5 chr6 147648412 + SAMD5 chr6 147885530 + Exonic hg19 STAD TCGA-D7-6818-01A 8 0 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 50526 ChimerSeq STARFusion TCGA_RNA-Seq MTATP6P1-MTND1P23 MTATP6P1 chr1 569579 + MTND1P23 chr1 564706 + Exonic hg19 STAD TCGA-D7-6818-01A 3 0 Out-of-frame Intra-chr p36.33 p36.33 50527 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF5-STEAP1B RAPGEF5 chr7 22330794 - STEAP1B chr7 22672541 - Exonic hg19 STAD TCGA-D7-6818-01A 3 0 CDS-5'UTR Intra-chr p15.3 p15.3 Seq+ 50528 ChimerSeq STARFusion TCGA_RNA-Seq CAMKMT-PPM1B CAMKMT chr2 44589284 + PPM1B chr2 44428325 + Exonic hg19 STAD TCGA-D7-6818-01A 2 0 CDS-5'UTR Intra-chr p21 p21 50529 ChimerSeq STARFusion TCGA_RNA-Seq HUWE1-FOXO4 HUWE1 chrX 53585932 - FOXO4 chrX 70321927 + Exonic hg19 STAD TCGA-D7-6818-01A 2 0 In-Frame Intra-chr p11.22 q13.1 Tumor suppressor gene Transcription factor 50530 ChimerSeq STARFusion TCGA_RNA-Seq LINC00473-PDE10A LINC00473 chr6 166401017 - PDE10A chr6 166195411 - Exonic hg19 STAD TCGA-D7-6818-01A 2 0 3'UTR-5'UTR Intra-chr q27 q27 50531 ChimerSeq STARFusion TCGA_RNA-Seq POMK-SMIM19 POMK chr8 42948706 + SMIM19 chr8 42401612 + Exonic hg19 STAD TCGA-D7-6818-01A 2 0 Out-of-frame Intra-chr p11.21 p11.21 50532 ChimerSeq STARFusion TCGA_RNA-Seq STMN3-STXBP1 STMN3 chr20 62284680 - STXBP1 chr9 130425484 + Exonic hg19 STAD TCGA-D7-6818-01A 2 0 Out-of-frame Inter-chr q13.33 q34.11 50533 ChimerSeq STARFusion TCGA_RNA-Seq CIRBP-ERAS CIRBP chr19 1269409 + ERAS chrX 48687491 + Exonic hg19 STAD TCGA-D7-A6EZ-01A 192 38 5'UTR-5'UTR Inter-chr p13.3 p11.23 Seq+ 50534 ChimerSeq STARFusion TCGA_RNA-Seq KPNA1-EEF1G KPNA1 chr3 122233604 - EEF1G chr11 62327926 - Exonic hg19 STAD TCGA-D7-A6EZ-01A 81 6 5'UTR-CDS Inter-chr q21.1 q12.3 Seq+ 50535 ChimerSeq STARFusion TCGA_RNA-Seq KPNA1-MIR3654 KPNA1 chr3 122233604 - MIR3654 chr11 62327926 - Exonic hg19 STAD TCGA-D7-A6EZ-01A 81 6 5'UTR-5'UTR Inter-chr q21.1 q33 50536 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN14-IFIT1 TSPAN14 chr10 82228443 + IFIT1 chr10 91162038 + Exonic hg19 STAD TCGA-D7-A6EZ-01A 22 16 5'UTR-CDS Intra-chr q23.1 q23.31 Seq+ 50537 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN14-IFIT1 TSPAN14 chr10 82214127 + IFIT1 chr10 91162038 + Exonic hg19 STAD TCGA-D7-A6EZ-01A 12 16 5'UTR-CDS Intra-chr q23.1 q23.31 Seq+ 50538 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-MAP6 UVRAG chr11 75526569 + MAP6 chr11 75317049 - Exonic hg19 STAD TCGA-RD-A8N4-01A 22 10 In-Frame Intra-chr q13.5 Tumor suppressor gene q13.5 Seq+ 50539 ChimerSeq STARFusion TCGA_RNA-Seq CLNS1A-NDUFC2 CLNS1A chr11 77333545 - NDUFC2 chr11 77784187 - Exonic hg19 STAD TCGA-RD-A8N4-01A 22 7 In-Frame Intra-chr q14.1 q14.1 Seq+ 50540 ChimerSeq STARFusion TCGA_RNA-Seq PAK1-AAMDC PAK1 chr11 77085373 - AAMDC chr11 77580768 + Exonic hg19 STAD TCGA-RD-A8N4-01A 19 8 Out-of-frame Intra-chr q14.1 STE:STE20 q14.1 Seq+ 50541 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-MAP6 UVRAG chr11 75526569 + MAP6 chr11 75299229 - Exonic hg19 STAD TCGA-RD-A8N4-01A 10 10 Out-of-frame Intra-chr q13.5 Tumor suppressor gene q13.5 Seq+ 50542 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-CMPK1 UVRAG chr11 75672593 + CMPK1 chr1 47834141 + Exonic hg19 STAD TCGA-RD-A8N4-01A 6 7 In-Frame Inter-chr q13.5 Tumor suppressor gene p33 Oncogene Seq+ 50543 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-CALD1 MALAT1 chr11 65267238 + CALD1 chr7 134618397 + Exonic hg19 STAD TCGA-RD-A8N4-01A 3 12 Out-of-frame Inter-chr q13.1 q33 50544 ChimerSeq STARFusion TCGA_RNA-Seq BAIAP2L1-GTF2I BAIAP2L1 chr7 97991669 - GTF2I chr7 74163605 + Exonic hg19 STAD TCGA-VQ-A8E0-01A 222 30 In-Frame Intra-chr q22.1 q11.23 Transcription factor Seq+ 50545 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-INPP5D DGKD chr2 234372929 + INPP5D chr2 234098496 + Exonic hg19 STAD TCGA-VQ-A8E0-01A 97 16 In-Frame Intra-chr Seq+ 50546 ChimerSeq STARFusion TCGA_RNA-Seq BAIAP2L1-TSHZ2 BAIAP2L1 chr7 98030114 - TSHZ2 chr20 52103683 + Exonic hg19 STAD TCGA-VQ-A8E0-01A 26 1 CDS-3'UTR Inter-chr q22.1 q13.2 Transcription factor Seq+ 50547 ChimerSeq STARFusion TCGA_RNA-Seq POLR2J2-ZHX3 POLR2J2 chr7 102306524 - ZHX3 chr20 39897723 - Exonic hg19 STAD TCGA-VQ-A8E0-01A 21 3 3'UTR-5'UTR Inter-chr q22.1 q12 Transcription factor 50548 ChimerSeq STARFusion TCGA_RNA-Seq TESK2-PRDX1 TESK2 chr1 45956524 - PRDX1 chr1 45984726 - Exonic hg19 STAD TCGA-VQ-A8E0-01A 21 2 5'UTR-5'UTR Intra-chr p34.1 TKL:LISK p34.1 Seq+ 50549 ChimerSeq STARFusion TCGA_RNA-Seq CHRNA7-PRR16 CHRNA7 chr15 32323240 + PRR16 chr5 120021649 + Exonic hg19 STAD TCGA-VQ-A8E0-01A 18 1 In-Frame Inter-chr q13.3 q23.1 Seq+ 50550 ChimerSeq STARFusion TCGA_RNA-Seq SDSL-DTX1 SDSL chr12 113866264 + DTX1 chr12 113515229 + Exonic hg19 STAD TCGA-VQ-A8E0-01A 17 4 In-Frame Intra-chr q24.13 q24.13 Seq+ 50551 ChimerSeq STARFusion TCGA_RNA-Seq GATS-MCM7 GATS chr7 99869461 - MCM7 chr7 99691024 - Exonic hg19 STAD TCGA-VQ-A8E0-01A 15 2 Out-of-frame Intra-chr q22.1 q22.1 50552 ChimerSeq STARFusion TCGA_RNA-Seq CDC7-LRRC8C CDC7 chr1 91979600 + LRRC8C chr1 90184483 + Exonic hg19 STAD TCGA-VQ-A8E0-01A 14 2 CDS-3'UTR Intra-chr p22.1 Other:CDC7 p22.2 Seq+ 50553 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL2-TNFAIP2 RN7SL2 chr14 50329518 - TNFAIP2 chr14 103602903 + Exonic hg19 STAD TCGA-VQ-A8E0-01A 14 2 Out-of-frame Intra-chr q21.3 q32.32 50554 ChimerSeq STARFusion TCGA_RNA-Seq MDN1-BACH2 MDN1 chr6 90428085 - BACH2 chr6 90638188 - Exonic hg19 STAD TCGA-VQ-A8E0-01A 14 1 CDS-3'UTR Intra-chr q15 q15 Transcription factor Seq+ 50555 ChimerSeq STARFusion TCGA_RNA-Seq GATS-MCM7 GATS chr7 99869461 - MCM7 chr7 99691024 - Exonic hg19 STAD TCGA-VQ-A8E0-01A 13 2 Out-of-frame Intra-chr q22.1 q22.1 50556 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0232-MRFAP1 KIAA0232 chr4 6784568 + MRFAP1 chr4 6642555 + Exonic hg19 STAD TCGA-VQ-A8E0-01A 10 6 5'UTR-5'UTR Intra-chr p16.1 p16.1 Seq+ 50557 ChimerSeq STARFusion TCGA_RNA-Seq CCAT1-CASC8 CCAT1 chr8 128231055 - CASC8 chr8 128302305 - Exonic hg19 STAD TCGA-HU-A4GD-01A 27 10 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 50558 ChimerSeq STARFusion TCGA_RNA-Seq MARVELD3-PHLPP2 MARVELD3 chr16 71663397 + PHLPP2 chr16 71724612 - Exonic hg19 STAD TCGA-HU-A4GD-01A 11 2 In-Frame Intra-chr q22.2 q22.2 Tumor suppressor gene Seq+ 50559 ChimerSeq STARFusion TCGA_RNA-Seq SSBP2-RPS23 SSBP2 chr5 81046800 - RPS23 chr5 81573671 - Exonic hg19 STAD TCGA-BR-4187-01A 95 20 CDS-5'UTR Intra-chr q14.1 Tumor suppressor gene q14.2 Seq+ 50560 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL2-IFI6 RN7SL2 chr14 50329335 - IFI6 chr1 27992763 - Exonic hg19 STAD TCGA-BR-4187-01A 15 17 Out-of-frame Inter-chr q21.3 p35.3 50561 ChimerSeq STARFusion TCGA_RNA-Seq MAP2K2-DAPK3 MAP2K2 chr19 4123781 - DAPK3 chr19 3969827 - Exonic hg19 STAD TCGA-BR-4187-01A 17 7 CDS-5'UTR Intra-chr p13.3 STE:STE7 Oncogene p13.3 CAMK:DAPK Tumor suppressor gene Seq+ 50562 ChimerSeq STARFusion TCGA_RNA-Seq REG1A-DDX52 REG1A chr2 79350526 + DDX52 chr17 35985986 - Exonic hg19 STAD TCGA-BR-4187-01A 10 0 Out-of-frame Inter-chr p12 q12 50563 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125718 - CXCL16 chr17 4637332 - Exonic hg19 STAD TCGA-BR-4191-01A 5 8 Out-of-frame Inter-chr q12.2 p13.2 50564 ChimerSeq STARFusion TCGA_RNA-Seq VCL-ADK VCL chr10 75758133 + ADK chr10 76349040 + Exonic hg19 STAD TCGA-BR-7957-01A 37 29 In-Frame Intra-chr q22.2 q22.2 Seq+ 50565 ChimerSeq STARFusion TCGA_RNA-Seq VCL-ADK VCL chr10 75758133 + ADK chr10 76285014 + Exonic hg19 STAD TCGA-BR-7957-01A 28 29 In-Frame Intra-chr q22.2 q22.2 Seq+ 50566 ChimerSeq STARFusion TCGA_RNA-Seq MAP4K5-NIN MAP4K5 chr14 50971518 - NIN chr14 51210247 - Exonic hg19 STAD TCGA-CD-8530-01A 10 0 Out-of-frame Intra-chr q22.1 q22.1 Oncogene Seq+ 50567 ChimerSeq STARFusion TCGA_RNA-Seq INTS4-KCTD21 INTS4 chr11 77690042 - KCTD21 chr11 77885629 - Exonic hg19 STAD TCGA-CD-8530-01A 5 1 CDS-5'UTR Intra-chr q14.1 q14.1 Seq+ 50568 ChimerSeq STARFusion TCGA_RNA-Seq LDLR-LYZ LDLR chr19 11243101 + LYZ chr12 69747559 + Exonic hg19 STAD TCGA-CD-8530-01A 4 2 Out-of-frame Inter-chr p13.2 q15 50569 ChimerSeq STARFusion TCGA_RNA-Seq TMSB4X-CTSB TMSB4X chrX 12994437 + CTSB chr8 11702324 - Exonic hg19 STAD TCGA-CD-8530-01A 4 2 Out-of-frame Inter-chr p22.2 p23.1 50570 ChimerSeq STARFusion TCGA_RNA-Seq TMSB4X-CTSB TMSB4X chrX 12994451 + CTSB chr8 11702310 - Exonic hg19 STAD TCGA-CD-8530-01A 4 2 Out-of-frame Inter-chr p22.2 p23.1 50571 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-FAM210B LYZ chr12 69747265 + FAM210B chr20 54942664 + Exonic hg19 STAD TCGA-CD-8530-01A 4 0 Out-of-frame Inter-chr q15 q13.2 50572 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL1-ATP5H RN7SL1 chr14 50053593 + ATP5H chr17 73037989 - Exonic hg19 STAD TCGA-CD-8530-01A 4 0 Out-of-frame Inter-chr q21.3 q25.1 50573 ChimerSeq STARFusion TCGA_RNA-Seq CD44-YWHAB CD44 chr11 35231552 + YWHAB chr20 43530264 + Exonic hg19 STAD TCGA-CD-8530-01A 3 0 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene q13.12 50574 ChimerSeq STARFusion TCGA_RNA-Seq EHMT1-ARRDC1 EHMT1 chr9 140513501 + ARRDC1 chr9 140507348 + Exonic hg19 STAD TCGA-CD-8530-01A 3 0 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 50575 ChimerSeq STARFusion TCGA_RNA-Seq HSP90AB1-OXCT1 HSP90AB1 chr6 44218082 + OXCT1 chr5 41730478 - Exonic hg19 STAD TCGA-CD-8530-01A 3 0 Out-of-frame Inter-chr p21.1 Oncogene p13.1 50576 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-NT5C2 LYZ chr12 69747295 + NT5C2 chr10 104848187 - Exonic hg19 STAD TCGA-CD-8530-01A 3 0 Out-of-frame Inter-chr q15 q24.33 50577 ChimerSeq STARFusion TCGA_RNA-Seq PSMD5-CDK5RAP2 PSMD5 chr9 123595590 - CDK5RAP2 chr9 123280923 - Exonic hg19 STAD TCGA-CD-8530-01A 2 4 In-Frame Intra-chr q33.2 q33.2 Seq+ 50578 ChimerSeq STARFusion TCGA_RNA-Seq UBXN7-OTUD7B UBXN7 chr3 196080658 - OTUD7B chr1 149911564 - Exonic hg19 STAD TCGA-CD-8530-01A 3 0 Out-of-frame Inter-chr q29 q21.2 50579 ChimerSeq STARFusion TCGA_RNA-Seq XPO7-SLC20A2 XPO7 chr8 21777299 + SLC20A2 chr8 42330172 - Exonic hg19 STAD TCGA-CD-8530-01A 3 0 CDS-5'UTR Intra-chr p21.3 p11.21 50580 ChimerSeq STARFusion TCGA_RNA-Seq CXorf57-NUP62CL CXorf57 chrX 105855953 + NUP62CL chrX 106418423 - Exonic hg19 STAD TCGA-CD-8530-01A 2 1 CDS-5'UTR Intra-chr q22.3 q22.3 Seq+ 50581 ChimerSeq STARFusion TCGA_RNA-Seq ERG-APP ERG chr21 40033582 - APP chr21 27484463 - Exonic hg19 STAD TCGA-CD-8530-01A 2 1 5'UTR-5'UTR Intra-chr q22.2 Oncogene Transcription factor q21.3 Seq+ 50582 ChimerSeq STARFusion TCGA_RNA-Seq NUP62CL-PRPS1 NUP62CL chrX 106449503 - PRPS1 chrX 106882525 + Exonic hg19 STAD TCGA-CD-8530-01A 2 1 5'UTR-CDS Intra-chr q22.3 q22.3 50583 ChimerSeq STARFusion TCGA_RNA-Seq AARS-JPX AARS chr16 70323324 - JPX chrX 73214675 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 5'UTR-5'UTR Inter-chr q22.1 q13.2 50584 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD12-VAPA ANKRD12 chr18 9136963 + VAPA chr18 9950392 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 5'UTR-CDS Intra-chr p11.22 p11.22 50585 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD20A14P-PDE4D ANKRD20A14P chr1 142813293 + PDE4D chr5 58511794 - Exonic hg19 STAD TCGA-CD-8530-01A 2 0 Out-of-frame Inter-chr q12.1 50586 ChimerSeq STARFusion TCGA_RNA-Seq AP3S1-LINC00339 AP3S1 chr5 115238689 + LINC00339 chr1 22356773 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 CDS-5'UTR Inter-chr q22.3 p36.12 50587 ChimerSeq STARFusion TCGA_RNA-Seq ATL2-DHX57 ATL2 chr2 38570410 - DHX57 chr2 39095553 - Exonic hg19 STAD TCGA-CD-8530-01A 2 0 CDS-5'UTR Intra-chr p22.1 p22.1 Seq+ 50588 ChimerSeq STARFusion TCGA_RNA-Seq BRD4-ECH1 BRD4 chr19 15443101 - ECH1 chr19 39308215 - Exonic hg19 STAD TCGA-CD-8530-01A 2 0 5'UTR-CDS Intra-chr p13.12 Atypical:BRD 50589 ChimerSeq STARFusion TCGA_RNA-Seq CDC42EP5-HOOK3 CDC42EP5 chr19 54982766 - HOOK3 chr8 42761316 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 5'UTR-CDS Inter-chr p11.21 Oncogene 50590 ChimerSeq STARFusion TCGA_RNA-Seq CFD-MED16 CFD chr19 861956 + MED16 chr19 891149 - Exonic hg19 STAD TCGA-CD-8530-01A 2 0 CDS-5'UTR Intra-chr p13.3 p13.3 50591 ChimerSeq STARFusion TCGA_RNA-Seq CHP1-ANXA2 CHP1 chr15 41523647 + ANXA2 chr15 60656722 - Exonic hg19 STAD TCGA-CD-8530-01A 2 0 Out-of-frame Intra-chr q15.1 q22.2 50592 ChimerSeq STARFusion TCGA_RNA-Seq CLN8-GNAS CLN8 chr8 1712051 + GNAS chr20 57470667 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 5'UTR-5'UTR Inter-chr p23.3 q13.32 Oncogene 50593 ChimerSeq STARFusion TCGA_RNA-Seq CMYA5-PAPD4 CMYA5 chr5 79054725 + PAPD4 chr5 78964715 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 Out-of-frame Intra-chr q14.1 q14.1 50594 ChimerSeq STARFusion TCGA_RNA-Seq CNPY2-PMPCA CNPY2 chr12 56708635 - PMPCA chr9 139311403 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 In-Frame Inter-chr q13.3 q34.3 50595 ChimerSeq STARFusion TCGA_RNA-Seq CRAMP1L-RNF10 CRAMP1L chr16 1664986 + RNF10 chr12 121013434 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 Out-of-frame Inter-chr q24.31 50596 ChimerSeq STARFusion TCGA_RNA-Seq CTNNA1-PAIP2 CTNNA1 chr5 138163407 + PAIP2 chr5 138704422 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 In-Frame Intra-chr q31.2 Oncogene q31.2 Tumor suppressor gene 50597 ChimerSeq STARFusion TCGA_RNA-Seq EIF4A2-SMAD6 EIF4A2 chr3 186505053 + SMAD6 chr15 67004006 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 Out-of-frame Inter-chr q27.3 q22.31 50598 ChimerSeq STARFusion TCGA_RNA-Seq FAM126B-VPS35 FAM126B chr2 201936333 - VPS35 chr16 46711310 - Exonic hg19 STAD TCGA-CD-8530-01A 2 0 5'UTR-CDS Inter-chr q33.1 q11.2 Seq+ 50599 ChimerSeq STARFusion TCGA_RNA-Seq FANCC-AKAP13 FANCC chr9 98079808 - AKAP13 chr15 86251250 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 5'UTR-CDS Inter-chr q22.32 Oncogene q25.3 50600 ChimerSeq STARFusion TCGA_RNA-Seq FXR1-PPM1B FXR1 chr3 180630524 + PPM1B chr2 44459455 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 In-Frame Inter-chr q26.33 p21 50601 ChimerSeq STARFusion TCGA_RNA-Seq GALNT2-TPP2 GALNT2 chr1 230339036 + TPP2 chr13 103326633 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 In-Frame Inter-chr q42.13 q33.1 50602 ChimerSeq STARFusion TCGA_RNA-Seq GLCE-LRRC28 GLCE chr15 69502745 + LRRC28 chr15 99926235 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 5'UTR-CDS Intra-chr q23 q26.3 50603 ChimerSeq STARFusion TCGA_RNA-Seq HPCAL1-RERE HPCAL1 chr2 10537046 + RERE chr1 8482867 - Exonic hg19 STAD TCGA-CD-8530-01A 2 0 5'UTR-5'UTR Inter-chr p25.1 p36.23 50604 ChimerSeq STARFusion TCGA_RNA-Seq IGF1R-SFPQ IGF1R chr15 99491937 + SFPQ chr1 35643637 - Exonic hg19 STAD TCGA-CD-8530-01A 2 0 CDS-3'UTR Inter-chr q26.3 TK:InsR Oncogene p34.3 50605 ChimerSeq STARFusion TCGA_RNA-Seq LONRF1-RPS12 LONRF1 chr8 12586410 - RPS12 chr6 133138099 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 In-Frame Inter-chr p23.1 q23.2 50606 ChimerSeq STARFusion TCGA_RNA-Seq MAFK-JAG2 MAFK chr7 1570534 + JAG2 chr14 105624100 - Exonic hg19 STAD TCGA-CD-8530-01A 2 0 5'UTR-CDS Inter-chr p22.3 Transcription factor q32.33 50607 ChimerSeq STARFusion TCGA_RNA-Seq MAGED1-IL26 MAGED1 chrX 51546213 + IL26 chr12 68595863 - Exonic hg19 STAD TCGA-CD-8530-01A 2 0 5'UTR-CDS Inter-chr p11.22 q15 Seq+ 50608 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-ELP6 MAP4 chr3 48130263 - ELP6 chr3 47545938 - Exonic hg19 STAD TCGA-CD-8530-01A 2 0 Out-of-frame Intra-chr p21.31 p21.31 50609 ChimerSeq STARFusion TCGA_RNA-Seq MFAP3-GALNT10 MFAP3 chr5 153529506 + GALNT10 chr5 153674376 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 3'UTR-CDS Intra-chr q33.2 q33.2 50610 ChimerSeq STARFusion TCGA_RNA-Seq MITF-FOXP1 MITF chr3 69788852 + FOXP1 chr3 71027180 - Exonic hg19 STAD TCGA-CD-8530-01A 2 0 Out-of-frame Intra-chr p13 Oncogene Transcription factor p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 50611 ChimerSeq STARFusion TCGA_RNA-Seq MYL6-MYC MYL6 chr12 56553406 + MYC chr8 128750538 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 Out-of-frame Inter-chr q13.2 q24.21 Oncogene Transcription factor 50612 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-HDAC7 NCOR2 chr12 125051854 - HDAC7 chr12 48192755 - Exonic hg19 STAD TCGA-CD-8530-01A 2 0 5'UTR-CDS Intra-chr q24.31 q13.11 50613 ChimerSeq STARFusion TCGA_RNA-Seq NDUFS7-RHOA NDUFS7 chr19 1383941 + RHOA chr3 49413024 - Exonic hg19 STAD TCGA-CD-8530-01A 2 0 CDS-5'UTR Inter-chr p13.3 p21.31 Oncogene Tumor suppressor gene 50614 ChimerSeq STARFusion TCGA_RNA-Seq NFRKB-APLP2 NFRKB chr11 129765391 - APLP2 chr11 130010293 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 5'UTR-5'UTR Intra-chr q24.3 q24.3 50615 ChimerSeq STARFusion TCGA_RNA-Seq OGDH-GBAS OGDH chr7 44646252 + GBAS chr7 56045819 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 5'UTR-CDS Intra-chr p13 50616 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-LPP PPP6R3 chr11 68318654 + LPP chr3 188583988 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 In-Frame Inter-chr q13.2 q27.3 Oncogene 50617 ChimerSeq STARFusion TCGA_RNA-Seq PRAM1-AKAP10 PRAM1 chr19 8562648 - AKAP10 chr17 19827830 - Exonic hg19 STAD TCGA-CD-8530-01A 2 0 Out-of-frame Inter-chr p13.2 p11.2 50618 ChimerSeq STARFusion TCGA_RNA-Seq PRR4-PAWR PRR4 chr12 11199619 - PAWR chr12 79998501 - Exonic hg19 STAD TCGA-CD-8530-01A 2 0 Out-of-frame Intra-chr q21.2 Tumor suppressor gene 50619 ChimerSeq STARFusion TCGA_RNA-Seq PSMD1-NAA38 PSMD1 chr2 232030731 + NAA38 chr7 117825701 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 5'UTR-CDS Inter-chr q37.1 p13.1 50620 ChimerSeq STARFusion TCGA_RNA-Seq RNF38-FLNB RNF38 chr9 36487305 - FLNB chr3 58062773 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 5'UTR-CDS Inter-chr p13.2 p14.3 50621 ChimerSeq STARFusion TCGA_RNA-Seq RPL7A-EIF4EBP1 RPL7A chr9 136215897 + EIF4EBP1 chr8 37914599 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 In-Frame Inter-chr p11.23 50622 ChimerSeq STARFusion TCGA_RNA-Seq RUFY3-NEDD9 RUFY3 chr4 71571011 + NEDD9 chr6 11213960 - Exonic hg19 STAD TCGA-CD-8530-01A 2 0 Out-of-frame Inter-chr q13.3 p24.2 50623 ChimerSeq STARFusion TCGA_RNA-Seq SBF2-ATP10A SBF2 chr11 9875087 - ATP10A chr15 25967056 - Exonic hg19 STAD TCGA-CD-8530-01A 2 0 Out-of-frame Inter-chr p15.4 q12 Seq+ 50624 ChimerSeq STARFusion TCGA_RNA-Seq SLC35E2B-RBM25 SLC35E2B chr1 1599766 - RBM25 chr14 73569900 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 Out-of-frame Inter-chr p36.33 q24.2 50625 ChimerSeq STARFusion TCGA_RNA-Seq SMURF1-THADA SMURF1 chr7 98741349 - THADA chr2 43657441 - Exonic hg19 STAD TCGA-CD-8530-01A 2 0 Out-of-frame Inter-chr p21 50626 ChimerSeq STARFusion TCGA_RNA-Seq SUGT1P3-SLC20A2 SUGT1P3 chr13 41495755 - SLC20A2 chr8 42390478 - Exonic hg19 STAD TCGA-CD-8530-01A 2 0 3'UTR-5'UTR Inter-chr q14.11 p11.21 50627 ChimerSeq STARFusion TCGA_RNA-Seq TAS2R14-PAWR TAS2R14 chr12 11199619 - PAWR chr12 79998501 - Exonic hg19 STAD TCGA-CD-8530-01A 2 0 Out-of-frame Intra-chr q21.2 Tumor suppressor gene 50628 ChimerSeq STARFusion TCGA_RNA-Seq TGFBR3-SH3GLB1 TGFBR3 chr1 92262844 - SH3GLB1 chr1 87181407 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 In-Frame Intra-chr p22.1 Tumor suppressor gene p22.3 Tumor suppressor gene 50629 ChimerSeq STARFusion TCGA_RNA-Seq TNKS-MFHAS1 TNKS chr8 9538310 + MFHAS1 chr8 8655001 - Exonic hg19 STAD TCGA-CD-8530-01A 2 0 Out-of-frame Intra-chr p23.1 p23.1 50630 ChimerSeq STARFusion TCGA_RNA-Seq TPTE2P5-SLC20A2 TPTE2P5 chr13 41495755 - SLC20A2 chr8 42390478 - Exonic hg19 STAD TCGA-CD-8530-01A 2 0 Out-of-frame Inter-chr q14.11 p11.21 50631 ChimerSeq STARFusion TCGA_RNA-Seq TRAM2-RIPK1 TRAM2 chr6 52441594 - RIPK1 chr6 3076998 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 CDS-5'UTR Intra-chr p12.2 p25.2 TKL:RIPK 50632 ChimerSeq STARFusion TCGA_RNA-Seq UBR5-RBPJ UBR5 chr8 103424401 - RBPJ chr4 26387975 + Exonic hg19 STAD TCGA-CD-8530-01A 2 0 In-Frame Inter-chr q22.3 Oncogene p15.2 Transcription factor 50633 ChimerSeq STARFusion TCGA_RNA-Seq USP10-ZDHHC7 USP10 chr16 84733717 + ZDHHC7 chr16 85029613 - Exonic hg19 STAD TCGA-CD-8530-01A 2 0 CDS-5'UTR Intra-chr q24.1 q24.1 50634 ChimerSeq STARFusion TCGA_RNA-Seq YTHDF1-FAM173B YTHDF1 chr20 61845216 - FAM173B chr5 10227759 - Exonic hg19 STAD TCGA-CD-8530-01A 2 0 In-Frame Inter-chr q13.33 p15.2 50635 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H15-NCKAP1 ZC3H15 chr2 187360061 + NCKAP1 chr2 183888644 - Exonic hg19 STAD TCGA-CD-8530-01A 2 0 In-Frame Intra-chr q32.1 q32.1 50636 ChimerSeq STARFusion TCGA_RNA-Seq EIF4B-ADAP1 EIF4B chr12 53421972 + ADAP1 chr7 975141 - Exonic hg19 STAD TCGA-D7-A4YT-01A 311 81 In-Frame Inter-chr q13.13 p22.3 Seq+ 50637 ChimerSeq STARFusion TCGA_RNA-Seq EIF4B-COX19 EIF4B chr12 53421972 + COX19 chr7 975141 - Exonic hg19 STAD TCGA-D7-A4YT-01A 311 81 CDS-3'UTR Inter-chr q13.13 p22.3 50638 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-C1orf115 IGL@ chr22 23223571 + C1orf115 chr1 220870297 + Exonic hg19 STAD TCGA-D7-A4YT-01A 95 0 Out-of-frame Inter-chr q11.22 q41 50639 ChimerSeq STARFusion TCGA_RNA-Seq HDAC1-ZBTB8B HDAC1 chr1 32757819 + ZBTB8B chr1 32946492 + Exonic hg19 STAD TCGA-D7-A4YT-01A 56 30 In-Frame Intra-chr p35.2 Tumor suppressor gene p35.1 Transcription factor Seq+ 50640 ChimerSeq STARFusion TCGA_RNA-Seq ADAP1-EIF4B ADAP1 chr7 994032 - EIF4B chr12 53427590 + Exonic hg19 STAD TCGA-D7-A4YT-01A 50 19 In-Frame Inter-chr p22.3 q13.13 Seq+ 50641 ChimerSeq STARFusion TCGA_RNA-Seq ADAP1-EIF4B ADAP1 chr7 985398 - EIF4B chr12 53427590 + Exonic hg19 STAD TCGA-D7-A4YT-01A 37 18 Out-of-frame Inter-chr p22.3 q13.13 Seq+ 50642 ChimerSeq STARFusion TCGA_RNA-Seq HDAC1-ZBTB8B HDAC1 chr1 32757819 + ZBTB8B chr1 32936185 + Exonic hg19 STAD TCGA-D7-A4YT-01A 19 30 CDS-5'UTR Intra-chr p35.2 Tumor suppressor gene p35.1 Transcription factor Seq+ 50643 ChimerSeq STARFusion TCGA_RNA-Seq HERC2P2-OCA2 HERC2P2 chr15 23356106 - OCA2 chr15 28171400 - Exonic hg19 STAD TCGA-D7-A4YT-01A 21 3 3'UTR-CDS Intra-chr q11.2 q13.1 50644 ChimerSeq STARFusion TCGA_RNA-Seq KAT2A-SLC38A10 KAT2A chr17 40272243 - SLC38A10 chr17 79220861 - Exonic hg19 STAD TCGA-D7-A4YT-01A 17 0 Out-of-frame Intra-chr q21.2 q25.3 Seq+ 50645 ChimerSeq STARFusion TCGA_RNA-Seq CHMP4B-OR4N4 CHMP4B chr20 32399464 + OR4N4 chr15 22382464 + Exonic hg19 STAD TCGA-D7-A4YT-01A 14 2 CDS-5'UTR Inter-chr q11.22 q11.2 50646 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106209411 - Exonic hg19 STAD TCGA-D7-A6F0-01A 59 0 Out-of-frame Inter-chr q21.2 32.33 50647 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076851 + IGHG1 chr14 106209411 - Exonic hg19 STAD TCGA-D7-A6F0-01A 59 0 Out-of-frame Inter-chr q21.2 q32.33 50648 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-RHOD PPP6R3 chr11 68272739 + RHOD chr11 66833367 + Exonic hg19 STAD TCGA-D7-A6F0-01A 30 19 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 50649 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106237746 - Exonic hg19 STAD TCGA-D7-A6F0-01A 32 0 Out-of-frame Inter-chr q21.2 32.33 50650 ChimerSeq STARFusion TCGA_RNA-Seq CRADD-MRPL42 CRADD chr12 94072848 + MRPL42 chr12 93894952 + Exonic hg19 STAD TCGA-D7-A6F0-01A 28 9 Out-of-frame Intra-chr q22 q22 Seq+ 50651 ChimerSeq STARFusion TCGA_RNA-Seq MAP4K3-CDKL4 MAP4K3 chr2 39605207 - CDKL4 chr2 39440613 - Exonic hg19 STAD TCGA-D7-A6F0-01A 26 4 Out-of-frame Intra-chr p22.1 p22.1 CMGC:CDKL Seq+ 50652 ChimerSeq STARFusion TCGA_RNA-Seq KAZN-TMEM51 KAZN chr1 15287371 + TMEM51 chr1 15536986 + Exonic hg19 STAD TCGA-D7-A6F0-01A 23 14 CDS-5'UTR Intra-chr p36.21 p36.21 Seq+ 50653 ChimerSeq STARFusion TCGA_RNA-Seq KAZN-TMEM51 KAZN chr1 15287371 + TMEM51 chr1 15541391 + Exonic hg19 STAD TCGA-D7-A6F0-01A 22 14 CDS-5'UTR Intra-chr p36.21 p36.21 Seq+ 50654 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076857 + IGH@ chr14 106237740 - Exonic hg19 STAD TCGA-D7-A6F0-01A 24 0 Out-of-frame Inter-chr q21.2 32.33 50655 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106111130 - Exonic hg19 STAD TCGA-D7-A6F0-01A 21 0 Out-of-frame Inter-chr q21.2 32.33 50656 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-RHOD PPP6R3 chr11 68272717 + RHOD chr11 66833367 + Exonic hg19 STAD TCGA-D7-A6F0-01A 16 19 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 50657 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-RHOD PPP6R3 chr11 68228295 + RHOD chr11 66833367 + Exonic hg19 STAD TCGA-D7-A6F0-01A 15 19 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 50658 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076851 + IGHG1 chr14 106237746 - Exonic hg19 STAD TCGA-D7-A6F0-01A 17 0 Out-of-frame Inter-chr q21.2 q32.33 50659 ChimerSeq STARFusion TCGA_RNA-Seq SPINT2-ZNF607 SPINT2 chr19 38774437 + ZNF607 chr19 38202593 - Exonic hg19 STAD TCGA-D7-A6F0-01A 13 5 CDS-5'UTR Intra-chr q13.2 Tumor suppressor gene q13.12 Transcription factor Seq+ 50660 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106136185 - Exonic hg19 STAD TCGA-D7-A6F0-01A 12 0 Out-of-frame Inter-chr q21.2 32.33 50661 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076857 + IGHG1 chr14 106237740 - Exonic hg19 STAD TCGA-D7-A6F0-01A 12 0 Out-of-frame Inter-chr q21.2 q32.33 50662 ChimerSeq STARFusion TCGA_RNA-Seq BAGE2-CTBP2P1 BAGE2 chr21 11058161 - CTBP2P1 chrY 59001440 + Exonic hg19 STAD TCGA-D7-A6F0-01A 11 1 Out-of-frame Inter-chr p11.2 50663 ChimerSeq STARFusion TCGA_RNA-Seq KAZN-TMEM51 KAZN chr1 15287371 + TMEM51 chr1 15545822 + Exonic hg19 STAD TCGA-D7-A6F0-01A 3 14 Out-of-frame Intra-chr p36.21 p36.21 Seq+ 50664 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1E-RAC1P2 CSNK1E chr22 38687330 - RAC1P2 chr4 46725851 - Exonic hg19 STAD TCGA-BR-8676-01A 6 0 Out-of-frame Inter-chr q13.1 p12 50665 ChimerSeq STARFusion TCGA_RNA-Seq CASP7-RPL13AP5 CASP7 chr10 115490653 + RPL13AP5 chr10 98510672 + Exonic hg19 STAD TCGA-BR-8676-01A 4 0 Out-of-frame Intra-chr q25.3 q24.1 50666 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-snoU13 GNB1 chr1 1716739 - snoU13 chr5 149408918 - Exonic hg19 STAD TCGA-BR-8676-01A 4 0 Out-of-frame Inter-chr p36.33 50667 ChimerSeq STARFusion TCGA_RNA-Seq ATP6AP1-EEF1A1 ATP6AP1 chrX 153664653 + EEF1A1 chr6 74227850 - Exonic hg19 STAD TCGA-BR-8676-01A 3 0 Out-of-frame Inter-chr q28 q13 Tumor suppressor gene 50668 ChimerSeq STARFusion TCGA_RNA-Seq EEF1A1-RPS20 EEF1A1 chr6 74227517 - RPS20 chr8 56985781 - Exonic hg19 STAD TCGA-BR-8676-01A 3 0 Out-of-frame Inter-chr q13 Tumor suppressor gene q12.1 50669 ChimerSeq STARFusion TCGA_RNA-Seq ILF2-MTERF ILF2 chr1 153634520 - MTERF chr7 91500268 - Exonic hg19 STAD TCGA-BR-8676-01A 3 0 Out-of-frame Inter-chr q21.3 50670 ChimerSeq STARFusion TCGA_RNA-Seq PCBP2-RPL13AP5 PCBP2 chr12 53873388 + RPL13AP5 chr10 98510672 + Exonic hg19 STAD TCGA-BR-8676-01A 3 0 Out-of-frame Inter-chr q13.13 q24.1 50671 ChimerSeq STARFusion TCGA_RNA-Seq RPL11-ZNF747 RPL11 chr1 24022908 + ZNF747 chr16 30542803 - Exonic hg19 STAD TCGA-BR-8676-01A 3 0 Out-of-frame Inter-chr p36.11 Tumor suppressor gene p11.2 Transcription factor 50672 ChimerSeq STARFusion TCGA_RNA-Seq RPLP0-ANK3 RPLP0 chr12 120634522 - ANK3 chr10 61787077 - Exonic hg19 STAD TCGA-BR-8676-01A 3 0 Out-of-frame Inter-chr q24.23 q21.2 50673 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H15-ITGAV ZC3H15 chr2 187351184 + ITGAV chr2 187487066 + Exonic hg19 STAD TCGA-BR-8676-01A 2 1 Out-of-frame Intra-chr q32.1 q32.1 Tumor suppressor gene 50674 ChimerSeq STARFusion TCGA_RNA-Seq DNMT1-ZNF563 DNMT1 chr19 10273343 - ZNF563 chr19 12433525 - Exonic hg19 STAD TCGA-HF-7134-01A 11 2 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene Transcription factor p13.2 Transcription factor Seq+ 50675 ChimerSeq STARFusion TCGA_RNA-Seq PSMD1-ARMC9 PSMD1 chr2 231948477 + ARMC9 chr2 232220510 + Exonic hg19 STAD TCGA-CG-4305-01A 13 18 CDS-3'UTR Intra-chr q37.1 q37.1 Seq+ 50676 ChimerSeq STARFusion TCGA_RNA-Seq UBAP1-NUDT2 UBAP1 chr9 34220946 + NUDT2 chr9 34338711 + Exonic hg19 STAD TCGA-CG-4305-01A 5 10 5'UTR-5'UTR Intra-chr p13.3 p13.3 50677 ChimerSeq STARFusion TCGA_RNA-Seq CNST-SCCPDH CNST chr1 246755243 + SCCPDH chr1 246890194 + Exonic hg19 STAD TCGA-CG-4305-01A 4 11 In-Frame Intra-chr q44 q44 50678 ChimerSeq STARFusion TCGA_RNA-Seq ERN2-EARS2 ERN2 chr16 23713711 - EARS2 chr16 23556024 - Exonic hg19 STAD TCGA-CG-4305-01A 4 6 In-Frame Intra-chr p12.2 p12.2 50679 ChimerSeq STARFusion TCGA_RNA-Seq LLGL2-UNK LLGL2 chr17 73560588 + UNK chr17 73787841 + Exonic hg19 STAD TCGA-CG-4305-01A 2 11 CDS-5'UTR Intra-chr q25.1 q25.1 50680 ChimerSeq STARFusion TCGA_RNA-Seq MFSD1-RNF111 MFSD1 chr3 158545126 + RNF111 chr15 59358963 + Exonic hg19 STAD TCGA-CG-4305-01A 2 0 Out-of-frame Inter-chr q25.32 q22.1 Tumor suppressor gene 50681 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R7-PAEP PPP1R7 chr2 242109282 + PAEP chr9 138458038 + Exonic hg19 STAD TCGA-CG-4305-01A 2 0 CDS-3'UTR Inter-chr q37.3 q34.3 Tumor suppressor gene 50682 ChimerSeq STARFusion TCGA_RNA-Seq CDC20-DEF8 CDC20 chr1 43825453 + DEF8 chr16 90025551 + Exonic hg19 STAD TCGA-BR-4255-01A 19 6 Out-of-frame Inter-chr p34.2 q24.3 Seq+ 50683 ChimerSeq STARFusion TCGA_RNA-Seq HPCAL1-CYS1 HPCAL1 chr2 10443303 + CYS1 chr2 10206083 - Exonic hg19 STAD TCGA-CD-5813-01A 14 1 5'UTR-CDS Intra-chr p25.1 p25.1 Seq+ 50684 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-HAUS8 CEACAM5 chr19 42233234 + HAUS8 chr19 17184668 - Exonic hg19 STAD TCGA-CD-5813-01A 12 0 Out-of-frame Intra-chr q13.2 p13.11 50685 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-HAUS8 CEACAM5 chr19 42233228 + HAUS8 chr19 17184674 - Exonic hg19 STAD TCGA-CD-5813-01A 7 0 Out-of-frame Intra-chr q13.2 p13.11 50686 ChimerSeq STARFusion TCGA_RNA-Seq ITGA6-THADA ITGA6 chr2 173362828 + THADA chr2 43460021 - Exonic hg19 STAD TCGA-CD-5813-01A 6 0 Out-of-frame Intra-chr q31.1 p21 Seq+ 50687 ChimerSeq STARFusion TCGA_RNA-Seq CAPNS1-GNB2 CAPNS1 chr19 36632016 + GNB2 chr7 100271471 + Exonic hg19 STAD TCGA-CD-5813-01A 3 0 Out-of-frame Inter-chr q13.12 q22.1 50688 ChimerSeq STARFusion TCGA_RNA-Seq CHD4-TUFM CHD4 chr12 6687648 - TUFM chr16 28854445 - Exonic hg19 STAD TCGA-CD-5813-01A 3 0 Out-of-frame Inter-chr p13.31 p11.2 50689 ChimerSeq STARFusion TCGA_RNA-Seq REG1A-IGKC REG1A chr2 79350484 + IGKC chr2 89156789 - Exonic hg19 STAD TCGA-CD-5813-01A 3 0 Out-of-frame Intra-chr p12 p11.2 50690 ChimerSeq STARFusion TCGA_RNA-Seq CDK7-PPWD1 CDK7 chr5 68531280 + PPWD1 chr5 64863340 + Exonic hg19 STAD TCGA-CD-5813-01A 2 0 Out-of-frame Intra-chr CMGC:CDK q12.3 50691 ChimerSeq STARFusion TCGA_RNA-Seq CHAF1A-ANKRD24 CHAF1A chr19 4409756 + ANKRD24 chr19 4210055 + Exonic hg19 STAD TCGA-CD-5813-01A 2 0 In-Frame Intra-chr p13.3 p13.3 50692 ChimerSeq STARFusion TCGA_RNA-Seq DDX5-XPO1 DDX5 chr17 62502194 - XPO1 chr2 61761038 - Exonic hg19 STAD TCGA-CD-5813-01A 2 0 CDS-5'UTR Inter-chr q23.3 p15 Oncogene 50693 ChimerSeq STARFusion TCGA_RNA-Seq DNMT1-B2M DNMT1 chr19 10341880 - B2M chr15 45007621 + Exonic hg19 STAD TCGA-CD-5813-01A 2 0 5'UTR-CDS Inter-chr p13.2 Oncogene Tumor suppressor gene Transcription factor Oncogene 50694 ChimerSeq STARFusion TCGA_RNA-Seq FAM174B-RPL38 FAM174B chr15 93173444 - RPL38 chr17 72200057 + Exonic hg19 STAD TCGA-CD-5813-01A 2 0 CDS-5'UTR Inter-chr q26.1 q25.1 50695 ChimerSeq STARFusion TCGA_RNA-Seq FNBP4-RTN3 FNBP4 chr11 47786822 - RTN3 chr11 63517463 + Exonic hg19 STAD TCGA-CD-5813-01A 2 0 In-Frame Intra-chr p11.2 q13.1 50696 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-SPOP GNB1 chr1 1822259 - SPOP chr17 47688819 - Exonic hg19 STAD TCGA-CD-5813-01A 2 0 5'UTR-CDS Inter-chr p36.33 q21.33 Oncogene Tumor suppressor gene 50697 ChimerSeq STARFusion TCGA_RNA-Seq GPSM2-USP25 GPSM2 chr1 109419850 + USP25 chr21 17214717 + Exonic hg19 STAD TCGA-CD-5813-01A 2 0 5'UTR-CDS Inter-chr p13.3 q21.1 50698 ChimerSeq STARFusion TCGA_RNA-Seq MBNL1-TERF2 MBNL1 chr3 151986881 + TERF2 chr16 69395392 - Exonic hg19 STAD TCGA-CD-5813-01A 2 0 5'UTR-CDS Inter-chr q25.1 q22.1 Transcription factor 50699 ChimerSeq STARFusion TCGA_RNA-Seq MON2-BIRC2 MON2 chr12 62949972 + BIRC2 chr11 102219329 + Exonic hg19 STAD TCGA-CD-5813-01A 2 0 CDS-5'UTR Inter-chr q14.1 q22.2 Oncogene 50700 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-C9orf78 MYH9 chr22 36698614 - C9orf78 chr9 132590531 - Exonic hg19 STAD TCGA-CD-5813-01A 2 0 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene q34.11 50701 ChimerSeq STARFusion TCGA_RNA-Seq NAB1-MYOF NAB1 chr2 191511584 + MYOF chr10 95169496 - Exonic hg19 STAD TCGA-CD-5813-01A 2 0 5'UTR-CDS Inter-chr q32.2 q23.33 50702 ChimerSeq STARFusion TCGA_RNA-Seq NFATC2-CST7 NFATC2 chr20 50048604 - CST7 chr20 24937923 + Exonic hg19 STAD TCGA-CD-5813-01A 2 0 In-Frame Intra-chr q13.2 Tumor suppressor gene Transcription factor p11.21 50703 ChimerSeq STARFusion TCGA_RNA-Seq NRIP1-ZNF573 NRIP1 chr21 16437066 - ZNF573 chr19 38231095 - Exonic hg19 STAD TCGA-CD-5813-01A 2 0 5'UTR-CDS Inter-chr q21.1 q13.13 Transcription factor 50704 ChimerSeq STARFusion TCGA_RNA-Seq PSAP-HDAC1 PSAP chr10 73579222 - HDAC1 chr1 32798618 + Exonic hg19 STAD TCGA-CD-5813-01A 2 0 Out-of-frame Inter-chr q22.1 p35.2 Tumor suppressor gene 50705 ChimerSeq STARFusion TCGA_RNA-Seq S1PR2-B2M S1PR2 chr19 10341880 - B2M chr15 45007621 + Exonic hg19 STAD TCGA-CD-5813-01A 2 0 5'UTR-CDS Inter-chr p13.2 Oncogene 50706 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L3-RPN2 SIPA1L3 chr19 38397998 + RPN2 chr20 35852281 + Exonic hg19 STAD TCGA-CD-5813-01A 2 0 5'UTR-CDS Inter-chr q13.13 q11.23 50707 ChimerSeq STARFusion TCGA_RNA-Seq SPARCL1-RPL35A SPARCL1 chr4 88414734 - RPL35A chr3 197677807 + Exonic hg19 STAD TCGA-CD-5813-01A 2 0 CDS-5'UTR Inter-chr q22.1 Tumor suppressor gene q29 Seq+ 50708 ChimerSeq STARFusion TCGA_RNA-Seq SRSF4-TTC3 SRSF4 chr1 29508158 - TTC3 chr21 38480692 + Exonic hg19 STAD TCGA-CD-5813-01A 2 0 In-Frame Inter-chr p35.3 q22.13 50709 ChimerSeq STARFusion TCGA_RNA-Seq TNIP1-G3BP1 TNIP1 chr5 150460441 - G3BP1 chr5 151166133 + Exonic hg19 STAD TCGA-CD-5813-01A 2 0 5'UTR-5'UTR Intra-chr q33.1 q33.1 50710 ChimerSeq STARFusion TCGA_RNA-Seq MTATP6P1-MTND2P28 MTATP6P1 chr1 569686 + MTND2P28 chr1 565124 + Exonic hg19 STAD TCGA-CG-4304-01A 3 18 Out-of-frame Intra-chr p36.33 p36.33 50711 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-NDRG3 EPB41L1 chr20 34700402 + NDRG3 chr20 35282104 - Exonic hg19 STAD TCGA-CG-4304-01A 3 10 5'UTR-CDS Intra-chr q11.23 q11.23 Seq+ 50712 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-NDRG3 EPB41L1 chr20 34713449 + NDRG3 chr20 35282104 - Exonic hg19 STAD TCGA-CG-4304-01A 2 10 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 50713 ChimerSeq STARFusion TCGA_RNA-Seq RHEB-ABCF2 RHEB chr7 151216546 - ABCF2 chr7 150923586 - Exonic hg19 STAD TCGA-CG-4304-01A 2 9 CDS-5'UTR Intra-chr q36.1 Oncogene q36.1 Seq+ 50714 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-IGLL5 IGH@ chr14 106329413 - IGLL5 chr22 23237553 + Exonic hg19 STAD TCGA-CG-4304-01A 3 3 Out-of-frame Inter-chr 32.33 q11.22 50715 ChimerSeq STARFusion TCGA_RNA-Seq FOCAD-PSIP1 FOCAD chr9 20885229 + PSIP1 chr9 15492223 - Exonic hg19 STAD TCGA-CG-4304-01A 2 4 Out-of-frame Intra-chr p21.3 p22.3 Oncogene 50716 ChimerSeq STARFusion TCGA_RNA-Seq GRAMD4-TBC1D22A GRAMD4 chr22 47060014 + TBC1D22A chr22 47274549 + Exonic hg19 STAD TCGA-BR-8372-01A 3 2 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 50717 ChimerSeq STARFusion TCGA_RNA-Seq ADAP1-SUN1 ADAP1 chr7 959605 - SUN1 chr7 908986 + Exonic hg19 STAD TCGA-BR-8372-01A 3 0 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 50718 ChimerSeq STARFusion TCGA_RNA-Seq COX19-SUN1 COX19 chr7 959605 - SUN1 chr7 908986 + Exonic hg19 STAD TCGA-BR-8372-01A 3 0 3'UTR-CDS Intra-chr p22.3 p22.3 50719 ChimerSeq STARFusion TCGA_RNA-Seq PPIB-ANK3 PPIB chr15 64448034 - ANK3 chr10 61787076 - Exonic hg19 STAD TCGA-BR-8372-01A 3 0 Out-of-frame Inter-chr q22.31 q21.2 50720 ChimerSeq STARFusion TCGA_RNA-Seq GRAMD4-TBC1D22A GRAMD4 chr22 47033857 + TBC1D22A chr22 47274549 + Exonic hg19 STAD TCGA-BR-8372-01A 2 2 In-Frame Intra-chr q13.31 q13.31 Seq+ 50721 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119576718 - TBX15 chr1 119474455 - Exonic hg19 STAD TCGA-BR-8372-01A 2 2 CDS-5'UTR Intra-chr p12 p12 Transcription factor 50722 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT5-FDFT1 AGPAT5 chr8 6590171 + FDFT1 chr8 11689027 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 In-Frame Intra-chr p23.1 p23.1 50723 ChimerSeq STARFusion TCGA_RNA-Seq ANTXR2-CLEC2D ANTXR2 chr4 81018654 - CLEC2D chr12 9840498 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 5'UTR-5'UTR Inter-chr q21.21 p13.31 50724 ChimerSeq STARFusion TCGA_RNA-Seq ATG13-PHF11 ATG13 chr11 46651650 + PHF11 chr13 50095030 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 5'UTR-CDS Inter-chr p11.2 q14.2 50725 ChimerSeq STARFusion TCGA_RNA-Seq B2M-UBB B2M chr15 45003811 + UBB chr17 16285216 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 CDS-5'UTR Inter-chr Oncogene p11.2 Seq+ 50726 ChimerSeq STARFusion TCGA_RNA-Seq BAZ2B-GNAS BAZ2B chr2 160472753 - GNAS chr20 57470667 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 5'UTR-5'UTR Inter-chr q24.2 Transcription factor q13.32 Oncogene 50727 ChimerSeq STARFusion TCGA_RNA-Seq BLNK-EPRS BLNK chr10 97987166 - EPRS chr1 220195860 - Exonic hg19 STAD TCGA-BR-8372-01A 2 0 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q41 50728 ChimerSeq STARFusion TCGA_RNA-Seq CCDC125-CCNB1 CCDC125 chr5 68602644 - CCNB1 chr5 68473066 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 Out-of-frame Intra-chr q13.2 50729 ChimerSeq STARFusion TCGA_RNA-Seq CCDC68-ARHGAP11B CCDC68 chr18 52585144 - ARHGAP11B chr15 31060061 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 CDS-3'UTR Inter-chr q21.2 50730 ChimerSeq STARFusion TCGA_RNA-Seq CCT4-DERA CCT4 chr2 62115516 - DERA chr12 16112763 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 In-Frame Inter-chr p15 p12.3 50731 ChimerSeq STARFusion TCGA_RNA-Seq CDKAL1-MTHFD2L CDKAL1 chr6 20548936 + MTHFD2L chr4 75091019 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 In-Frame Inter-chr p22.3 q13.3 50732 ChimerSeq STARFusion TCGA_RNA-Seq CHPT1-ETF1 CHPT1 chr12 102091912 + ETF1 chr5 137854556 - Exonic hg19 STAD TCGA-BR-8372-01A 2 0 Out-of-frame Inter-chr q23.2 q31.2 50733 ChimerSeq STARFusion TCGA_RNA-Seq CLK1-UBB CLK1 chr2 201729287 - UBB chr17 16285216 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 5'UTR-5'UTR Inter-chr q33.1 CMGC:CLK p11.2 50734 ChimerSeq STARFusion TCGA_RNA-Seq DCP1A-FOXA1 DCP1A chr3 53376171 - FOXA1 chr14 38061916 - Exonic hg19 STAD TCGA-BR-8372-01A 2 0 Out-of-frame Inter-chr p21.1 q21.1 Tumor suppressor gene Transcription factor 50735 ChimerSeq STARFusion TCGA_RNA-Seq DGCR2-CSNK1E DGCR2 chr22 19109641 - CSNK1E chr22 38710174 - Exonic hg19 STAD TCGA-BR-8372-01A 2 0 CDS-5'UTR Intra-chr q11.21 q13.1 50736 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC25-ASPH DNAJC25 chr9 114394023 + ASPH chr8 62531578 - Exonic hg19 STAD TCGA-BR-8372-01A 2 0 Out-of-frame Inter-chr q31.3 q12.3 50737 ChimerSeq STARFusion TCGA_RNA-Seq DYM-MAPRE2 DYM chr18 46858234 - MAPRE2 chr18 32706912 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 In-Frame Intra-chr q21.1 q12.1 50738 ChimerSeq STARFusion TCGA_RNA-Seq FAM13A-HERC6 FAM13A chr4 89702316 - HERC6 chr4 89345012 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 In-Frame Intra-chr q22.1 q22.1 50739 ChimerSeq STARFusion TCGA_RNA-Seq FAM210A-FDFT1 FAM210A chr18 13726328 - FDFT1 chr8 11666303 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 5'UTR-CDS Inter-chr p11.21 p23.1 50740 ChimerSeq STARFusion TCGA_RNA-Seq FPGS-VPS13C FPGS chr9 130566979 + VPS13C chr15 62148608 - Exonic hg19 STAD TCGA-BR-8372-01A 2 0 In-Frame Inter-chr q34.11 q22.2 50741 ChimerSeq STARFusion TCGA_RNA-Seq FTX-EEF1A1 FTX chrX 73494177 - EEF1A1 chr6 74229239 - Exonic hg19 STAD TCGA-BR-8372-01A 2 0 3'UTR-CDS Inter-chr q13.2 q13 Tumor suppressor gene 50742 ChimerSeq STARFusion TCGA_RNA-Seq GKAP1-UBQLN1 GKAP1 chr9 86414100 - UBQLN1 chr9 86301070 - Exonic hg19 STAD TCGA-BR-8372-01A 2 0 In-Frame Intra-chr q21.32 q21.32 50743 ChimerSeq STARFusion TCGA_RNA-Seq GNS-ZNF577 GNS chr12 65152865 - ZNF577 chr19 52384130 - Exonic hg19 STAD TCGA-BR-8372-01A 2 0 CDS-5'UTR Inter-chr q14.3 q13.41 Transcription factor 50744 ChimerSeq STARFusion TCGA_RNA-Seq GPI-COLGALT1 GPI chr19 34859607 + COLGALT1 chr19 17678215 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 Out-of-frame Intra-chr p13.11 50745 ChimerSeq STARFusion TCGA_RNA-Seq ING3-RAD21 ING3 chr7 120595678 + RAD21 chr8 117875498 - Exonic hg19 STAD TCGA-BR-8372-01A 2 0 In-Frame Inter-chr q31.31 Tumor suppressor gene q24.11 50746 ChimerSeq STARFusion TCGA_RNA-Seq KLHL18-YIF1B KLHL18 chr3 47324584 + YIF1B chr19 38796147 - Exonic hg19 STAD TCGA-BR-8372-01A 2 0 In-Frame Inter-chr p21.31 q13.2 50747 ChimerSeq STARFusion TCGA_RNA-Seq MBD5-ORC4 MBD5 chr2 148779253 + ORC4 chr2 148733544 - Exonic hg19 STAD TCGA-BR-8372-01A 2 0 5'UTR-5'UTR Intra-chr q23.1 q23.1 50748 ChimerSeq STARFusion TCGA_RNA-Seq MIF-ITGA7 MIF chr22 24237131 + ITGA7 chr12 56105918 - Exonic hg19 STAD TCGA-BR-8372-01A 2 0 Out-of-frame Inter-chr q11.23 Tumor suppressor gene q13.2 Tumor suppressor gene 50749 ChimerSeq STARFusion TCGA_RNA-Seq MIS18A-IDO1 MIS18A chr21 33642718 - IDO1 chr8 39776334 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 Out-of-frame Inter-chr q22.11 p11.21 50750 ChimerSeq STARFusion TCGA_RNA-Seq MLTK-SP3 MLTK chr2 173955918 + SP3 chr2 174774985 - Exonic hg19 STAD TCGA-BR-8372-01A 2 0 Out-of-frame Intra-chr q31.1 Transcription factor 50751 ChimerSeq STARFusion TCGA_RNA-Seq NBR2-IFI35 NBR2 chr17 41283287 + IFI35 chr17 41164196 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 5'UTR-CDS Intra-chr q21.31 q21.31 Seq+ 50752 ChimerSeq STARFusion TCGA_RNA-Seq NFYC-MRPL22 NFYC chr1 41157539 + MRPL22 chr5 154330381 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 5'UTR-CDS Inter-chr p34.2 Transcription factor q33.2 50753 ChimerSeq STARFusion TCGA_RNA-Seq NHS-UBE2N NHS chrX 17653720 + UBE2N chr12 93805075 - Exonic hg19 STAD TCGA-BR-8372-01A 2 0 Out-of-frame Inter-chr p22.2 q22 50754 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2-B2M NOTCH2 chr1 120611948 - B2M chr15 45007621 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 In-Frame Inter-chr p12 Oncogene Tumor suppressor gene Oncogene 50755 ChimerSeq STARFusion TCGA_RNA-Seq PARP4-SCOC PARP4 chr13 25086844 - SCOC chr4 141300275 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 5'UTR-CDS Inter-chr q12.12 q31.1 50756 ChimerSeq STARFusion TCGA_RNA-Seq PCMT1-TAB2 PCMT1 chr6 150071092 + TAB2 chr6 149718740 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 In-Frame Intra-chr q25.1 q25.1 50757 ChimerSeq STARFusion TCGA_RNA-Seq PELI1-B3GNT2 PELI1 chr2 64335374 - B3GNT2 chr2 62449347 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 CDS-5'UTR Intra-chr p14 p15 50758 ChimerSeq STARFusion TCGA_RNA-Seq PNISR-ZNF131 PNISR chr6 99873091 - ZNF131 chr5 43161351 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 5'UTR-CDS Inter-chr q16.2 p12 Transcription factor 50759 ChimerSeq STARFusion TCGA_RNA-Seq PSMA4-ACTN1 PSMA4 chr15 78834561 + ACTN1 chr14 69360464 - Exonic hg19 STAD TCGA-BR-8372-01A 2 0 Out-of-frame Inter-chr q25.1 q24.1 50760 ChimerSeq STARFusion TCGA_RNA-Seq RAI1-ACTG1 RAI1 chr17 17585107 + ACTG1 chr17 79479386 - Exonic hg19 STAD TCGA-BR-8372-01A 2 0 5'UTR-5'UTR Intra-chr p11.2 q25.3 50761 ChimerSeq STARFusion TCGA_RNA-Seq RNF4-BTF3 RNF4 chr4 2492229 + BTF3 chr5 72798313 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 In-Frame Inter-chr p16.3 q13.2 50762 ChimerSeq STARFusion TCGA_RNA-Seq ROCK2-DCAF17 ROCK2 chr2 11426665 - DCAF17 chr2 172337484 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 In-Frame Intra-chr p25.1 AGC:DMPK q31.1 50763 ChimerSeq STARFusion TCGA_RNA-Seq SEC24A-PVRL3 SEC24A chr5 133984863 + PVRL3 chr3 110863746 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 In-Frame Inter-chr q31.1 50764 ChimerSeq STARFusion TCGA_RNA-Seq SSH1-CORO1C SSH1 chr12 109251204 - CORO1C chr12 109095099 - Exonic hg19 STAD TCGA-BR-8372-01A 2 0 CDS-5'UTR Intra-chr q24.11 q24.11 50765 ChimerSeq STARFusion TCGA_RNA-Seq STK38L-CREBL2 STK38L chr12 27397265 + CREBL2 chr12 12788711 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 5'UTR-CDS Intra-chr p11.23 p13.1 Transcription factor 50766 ChimerSeq STARFusion TCGA_RNA-Seq STOML2-SON STOML2 chr9 35101423 - SON chr21 34915371 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 CDS-5'UTR Inter-chr p13.3 q22.11 Transcription factor 50767 ChimerSeq STARFusion TCGA_RNA-Seq TJAP1-MRPS18A TJAP1 chr6 43471444 + MRPS18A chr6 43643354 - Exonic hg19 STAD TCGA-BR-8372-01A 2 0 In-Frame Intra-chr p21.1 p21.1 50768 ChimerSeq STARFusion TCGA_RNA-Seq TMEM131-FNDC3B TMEM131 chr2 98611939 - FNDC3B chr3 171830242 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 CDS-5'UTR Inter-chr q11.2 q26.31 50769 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-RNF111 TPD52 chr8 81083660 - RNF111 chr15 59344504 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 In-Frame Inter-chr q21.13 q22.1 Tumor suppressor gene 50770 ChimerSeq STARFusion TCGA_RNA-Seq TPM3-RPS11 TPM3 chr1 154143125 - RPS11 chr19 50000777 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 CDS-5'UTR Inter-chr q21.3 q13.33 50771 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN14-CCDC6 TSPAN14 chr10 82249070 + CCDC6 chr10 61554355 - Exonic hg19 STAD TCGA-BR-8372-01A 2 0 Out-of-frame Intra-chr q23.1 q21.2 50772 ChimerSeq STARFusion TCGA_RNA-Seq UBE2D2-RNPC3 UBE2D2 chr5 138994202 + RNPC3 chr1 104097656 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 CDS-3'UTR Inter-chr q31.2 p21.1 50773 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-ADCY10 UVRAG chr11 75623083 + ADCY10 chr1 167874436 - Exonic hg19 STAD TCGA-BR-8372-01A 2 0 CDS-5'UTR Inter-chr q13.5 Tumor suppressor gene q24.2 50774 ChimerSeq STARFusion TCGA_RNA-Seq WDFY3-FAM13A WDFY3 chr4 85686963 - FAM13A chr4 89912301 - Exonic hg19 STAD TCGA-BR-8372-01A 2 0 In-Frame Intra-chr q21.23 q22.1 50775 ChimerSeq STARFusion TCGA_RNA-Seq ZNF567-NFYC ZNF567 chr19 37203414 + NFYC chr1 41204508 + Exonic hg19 STAD TCGA-BR-8372-01A 2 0 CDS-5'UTR Inter-chr q13.12 Transcription factor p34.2 Transcription factor 50776 ChimerSeq STARFusion TCGA_RNA-Seq SLC12A2-MEGF10 SLC12A2 chr5 127487088 + MEGF10 chr5 126790258 + Exonic hg19 STAD TCGA-BR-8590-01A 34 26 In-Frame Intra-chr q23.3 q23.2 Seq+ 50777 ChimerSeq STARFusion TCGA_RNA-Seq NACA-R3HDM2 NACA chr12 57118236 - R3HDM2 chr12 57689290 - Exonic hg19 STAD TCGA-BR-8590-01A 25 53 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 50778 ChimerSeq STARFusion TCGA_RNA-Seq CASZ1-MTOR CASZ1 chr1 10765549 - MTOR chr1 11288975 - Exonic hg19 STAD TCGA-BR-8590-01A 30 17 5'UTR-CDS Intra-chr p36.22 Transcription factor p36.22 Oncogene Seq+ 50779 ChimerSeq STARFusion TCGA_RNA-Seq RRBP1-OVOL2 RRBP1 chr20 17639241 - OVOL2 chr20 18005596 - Exonic hg19 STAD TCGA-BR-8590-01A 25 24 Out-of-frame Intra-chr p12.1 p11.23 Transcription factor Seq+ 50780 ChimerSeq STARFusion TCGA_RNA-Seq GSE1-CDH13 GSE1 chr16 85647004 + CDH13 chr16 83520082 + Exonic hg19 STAD TCGA-BR-8590-01A 28 8 Out-of-frame Intra-chr q24.1 q23.3 Tumor suppressor gene Seq+ 50781 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-SHISA5 MAP4 chr3 47898921 - SHISA5 chr3 48538726 - Exonic hg19 STAD TCGA-BR-8590-01A 22 13 In-Frame Intra-chr p21.31 p21.31 Seq+ 50782 ChimerSeq STARFusion TCGA_RNA-Seq SNX9-SYNJ2 SNX9 chr6 158296208 + SYNJ2 chr6 158513958 + Exonic hg19 STAD TCGA-BR-8590-01A 14 33 Out-of-frame Intra-chr q25.3 q25.3 50783 ChimerSeq STARFusion TCGA_RNA-Seq IGHA1-ZYX IGHA1 chr14 106174693 - ZYX chr7 143088137 + Exonic hg19 STAD TCGA-BR-8590-01A 21 3 Out-of-frame Inter-chr q34 Tumor suppressor gene 50784 ChimerSeq STARFusion TCGA_RNA-Seq TLN2-IGL@ TLN2 chr15 62949992 + IGL@ chr22 23235961 + Exonic hg19 STAD TCGA-BR-8590-01A 18 2 Out-of-frame Inter-chr q22.2 q11.22 50785 ChimerSeq STARFusion TCGA_RNA-Seq TLN2-IGLC1 TLN2 chr15 62949992 + IGLC1 chr22 23235961 + Exonic hg19 STAD TCGA-BR-8590-01A 18 2 Out-of-frame Inter-chr q22.2 q11.22 50786 ChimerSeq STARFusion TCGA_RNA-Seq TLN2-IGLL5 TLN2 chr15 62949992 + IGLL5 chr22 23235961 + Exonic hg19 STAD TCGA-BR-8590-01A 18 2 Out-of-frame Inter-chr q22.2 q11.22 50787 ChimerSeq STARFusion TCGA_RNA-Seq TRAP1-IGKC TRAP1 chr16 3711994 - IGKC chr2 89157198 - Exonic hg19 STAD TCGA-BR-8590-01A 15 1 Out-of-frame Inter-chr p13.3 p11.2 50788 ChimerSeq STARFusion TCGA_RNA-Seq DSTYK-NUCKS1 DSTYK chr1 205180399 - NUCKS1 chr1 205698749 - Exonic hg19 STAD TCGA-BR-8590-01A 10 16 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 50789 ChimerSeq STARFusion TCGA_RNA-Seq BMPR2-SPATS2L BMPR2 chr2 203332412 + SPATS2L chr2 201277034 + Exonic hg19 STAD TCGA-BR-8590-01A 11 9 3'UTR-CDS Intra-chr q33.1 TKL:STKR Tumor suppressor gene q33.1 Seq+ 50790 ChimerSeq STARFusion TCGA_RNA-Seq C11orf30-UVRAG C11orf30 chr11 76253411 + UVRAG chr11 75851755 + Exonic hg19 STAD TCGA-BR-8590-01A 12 5 Out-of-frame Intra-chr q13.5 Tumor suppressor gene Seq+ 50791 ChimerSeq STARFusion TCGA_RNA-Seq PYGB-PLK1S1 PYGB chr20 25274928 + PLK1S1 chr20 21195173 + Exonic hg19 STAD TCGA-BR-8590-01A 11 8 Out-of-frame Intra-chr p11.21 50792 ChimerSeq STARFusion TCGA_RNA-Seq RRBP1-OVOL2 RRBP1 chr20 17639250 - OVOL2 chr20 18005596 - Exonic hg19 STAD TCGA-BR-8590-01A 6 24 In-Frame Intra-chr p12.1 p11.23 Transcription factor Seq+ 50793 ChimerSeq STARFusion TCGA_RNA-Seq TACC2-PPAPDC1A TACC2 chr10 123903221 + PPAPDC1A chr10 122263330 + Exonic hg19 STAD TCGA-BR-8590-01A 10 8 In-Frame Intra-chr q26.13 Seq+ 50794 ChimerSeq STARFusion TCGA_RNA-Seq FOXK2-RNF213 FOXK2 chr17 80478183 + RNF213 chr17 78261614 + Exonic hg19 STAD TCGA-BR-8590-01A 10 6 Out-of-frame Intra-chr q25.3 Transcription factor q25.3 Oncogene Seq+ 50795 ChimerSeq STARFusion TCGA_RNA-Seq LRP1-IGL@ LRP1 chr12 57573890 + IGL@ chr22 23247169 + Exonic hg19 STAD TCGA-BR-8590-01A 11 2 Out-of-frame Inter-chr q13.3 q11.22 50796 ChimerSeq STARFusion TCGA_RNA-Seq LRP1-IGLC3 LRP1 chr12 57573890 + IGLC3 chr22 23247169 + Exonic hg19 STAD TCGA-BR-8590-01A 11 1 Out-of-frame Inter-chr q13.3 q11.22 50797 ChimerSeq STARFusion TCGA_RNA-Seq ABCC3-ACSF2 ABCC3 chr17 48712342 + ACSF2 chr17 48548389 + Exonic hg19 STAD TCGA-BR-8590-01A 7 16 In-Frame Intra-chr q21.33 q21.33 Seq+ 50798 ChimerSeq STARFusion TCGA_RNA-Seq EFEMP2-C6orf132 EFEMP2 chr11 65637328 - C6orf132 chr6 42096516 - Exonic hg19 STAD TCGA-BR-8590-01A 9 6 In-Frame Inter-chr q13.1 p21.1 Seq+ 50799 ChimerSeq STARFusion TCGA_RNA-Seq PCBP2-STAT3 PCBP2 chr12 53849785 + STAT3 chr17 40483549 - Exonic hg19 STAD TCGA-BR-8590-01A 9 6 Out-of-frame Inter-chr q13.13 q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 50800 ChimerSeq STARFusion TCGA_RNA-Seq PRKCI-GPR160 PRKCI chr3 169985788 + GPR160 chr3 169797562 + Exonic hg19 STAD TCGA-BR-8590-01A 8 10 CDS-5'UTR Intra-chr q26.2 q26.2 Seq+ 50801 ChimerSeq STARFusion TCGA_RNA-Seq NUCKS1-CNTN2 NUCKS1 chr1 205719085 - CNTN2 chr1 205041075 + Exonic hg19 STAD TCGA-BR-8590-01A 9 1 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 50802 ChimerSeq STARFusion TCGA_RNA-Seq PMF1-SYT11 PMF1 chr1 156182967 + SYT11 chr1 155850291 + Exonic hg19 STAD TCGA-BR-8590-01A 7 9 Out-of-frame Intra-chr q22 q22 Seq+ 50803 ChimerSeq STARFusion TCGA_RNA-Seq EHBP1-COMMD1 EHBP1 chr2 63086426 + COMMD1 chr2 62227836 + Exonic hg19 STAD TCGA-BR-8590-01A 8 2 Out-of-frame Intra-chr p15 p15 Seq+ 50804 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-IGHA1 ACTB chr7 5568108 - IGHA1 chr14 106174441 - Exonic hg19 STAD TCGA-BR-8590-01A 3 21 Out-of-frame Inter-chr p22.1 50805 ChimerSeq STARFusion TCGA_RNA-Seq NOL10-ROCK2 NOL10 chr2 10824693 - ROCK2 chr2 11323566 - Exonic hg19 STAD TCGA-BR-8590-01A 7 5 Out-of-frame Intra-chr p25.1 p25.1 AGC:DMPK Seq+ 50806 ChimerSeq STARFusion TCGA_RNA-Seq SMURF2P1-EFCAB5 SMURF2P1 chr17 28937960 + EFCAB5 chr17 28434852 + Exonic hg19 STAD TCGA-BR-8590-01A 7 5 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 50807 ChimerSeq STARFusion TCGA_RNA-Seq EXTL3-MIDN EXTL3 chr8 28558397 + MIDN chr19 1250389 + Exonic hg19 STAD TCGA-BR-8590-01A 6 6 Out-of-frame Inter-chr p21.1 Tumor suppressor gene p13.3 Seq+ 50808 ChimerSeq STARFusion TCGA_RNA-Seq PACS1-FAM32A PACS1 chr11 65838313 + FAM32A chr19 16296435 + Exonic hg19 STAD TCGA-BR-8590-01A 5 10 In-Frame Inter-chr q13.1 p13.11 Seq+ 50809 ChimerSeq STARFusion TCGA_RNA-Seq OTX1-EHBP1 OTX1 chr2 63281333 + EHBP1 chr2 63206323 + Exonic hg19 STAD TCGA-BR-8590-01A 5 9 In-Frame Intra-chr p15 Transcription factor p15 Seq+ 50810 ChimerSeq STARFusion TCGA_RNA-Seq PACS1-FAM32A PACS1 chr11 65838313 + FAM32A chr19 16301331 + Exonic hg19 STAD TCGA-BR-8590-01A 4 10 Out-of-frame Inter-chr q13.1 p13.11 Seq+ 50811 ChimerSeq STARFusion TCGA_RNA-Seq TRIM37-DNAH17 TRIM37 chr17 57161363 - DNAH17 chr17 76441762 - Exonic hg19 STAD TCGA-BR-8590-01A 5 6 In-Frame Intra-chr q22 q25.3 Seq+ 50812 ChimerSeq STARFusion TCGA_RNA-Seq EXTL3-MIDN EXTL3 chr8 28480327 + MIDN chr19 1251561 + Exonic hg19 STAD TCGA-BR-8590-01A 4 6 5'UTR-CDS Inter-chr p21.1 Tumor suppressor gene p13.3 Seq+ 50813 ChimerSeq STARFusion TCGA_RNA-Seq ZFP90-NFATC3 ZFP90 chr16 68573728 + NFATC3 chr16 68224671 + Exonic hg19 STAD TCGA-BR-8590-01A 5 2 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Transcription factor Seq+ 50814 ChimerSeq STARFusion TCGA_RNA-Seq TACC2-PPAPDC1A TACC2 chr10 123892249 + PPAPDC1A chr10 122263330 + Exonic hg19 STAD TCGA-BR-8590-01A 3 8 In-Frame Intra-chr q26.13 Seq+ 50815 ChimerSeq STARFusion TCGA_RNA-Seq PRKCI-GPR160 PRKCI chr3 169985788 + GPR160 chr3 169780221 + Exonic hg19 STAD TCGA-BR-8590-01A 2 10 CDS-5'UTR Intra-chr q26.2 q26.2 Seq+ 50816 ChimerSeq STARFusion TCGA_RNA-Seq CHMP1A-FANCA CHMP1A chr16 89720312 - FANCA chr16 89833645 - Exonic hg19 STAD TCGA-BR-8590-01A 2 9 Out-of-frame Intra-chr q24.3 q24.3 Oncogene Seq+ 50817 ChimerSeq STARFusion TCGA_RNA-Seq LARP1B-SLC25A31 LARP1B chr4 129028468 + SLC25A31 chr4 128665827 + Exonic hg19 STAD TCGA-BR-8590-01A 2 8 In-Frame Intra-chr q28.2 q28.1 Seq+ 50818 ChimerSeq STARFusion TCGA_RNA-Seq TFEB-EPS15L1 TFEB chr6 41703884 - EPS15L1 chr19 16488065 - Exonic hg19 STAD TCGA-BR-8590-01A 3 4 5'UTR-CDS Inter-chr p21.1 Transcription factor p13.11 Seq+ 50819 ChimerSeq STARFusion TCGA_RNA-Seq PPP2CA-PMPCA PPP2CA chr5 133561451 - PMPCA chr9 139316284 + Exonic hg19 STAD TCGA-R5-A7ZF-01A 10 5 In-Frame Inter-chr q31.1 Tumor suppressor gene q34.3 Seq+ 50820 ChimerSeq STARFusion TCGA_RNA-Seq MDM2-TMEM167A MDM2 chr12 69235964 + TMEM167A chr5 82350549 - Exonic hg19 STAD TCGA-R5-A7ZF-01A 9 0 Out-of-frame Inter-chr q15 Oncogene q14.2 Seq+ 50821 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86295183 + Exonic hg19 STAD TCGA-R5-A7ZF-01A 2 6 CDS-5'UTR Intra-chr q21.2 q21.2 50822 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL3-IFI6 RN7SL3 chr14 50320402 - IFI6 chr1 27992765 - Exonic hg19 STAD TCGA-CG-5721-01A 9 0 Out-of-frame Inter-chr q21.3 p35.3 50823 ChimerSeq STARFusion TCGA_RNA-Seq XXYLT1-FAM81A XXYLT1 chr3 194991284 - FAM81A chr15 59752132 + Exonic hg19 STAD TCGA-CG-5721-01A 5 0 Out-of-frame Inter-chr q29 q22.2 50824 ChimerSeq STARFusion TCGA_RNA-Seq IGLC2-PIGG IGLC2 chr22 23243387 + PIGG chr4 515503 + Exonic hg19 STAD TCGA-CG-5721-01A 4 0 Out-of-frame Inter-chr q11.22 p16.3 50825 ChimerSeq STARFusion TCGA_RNA-Seq AHNAK-PKM AHNAK chr11 62284482 - PKM chr15 72491879 - Exonic hg19 STAD TCGA-CG-5721-01A 3 0 Out-of-frame Inter-chr q12.3 Tumor suppressor gene q23 50826 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP35-COL12A1 ARHGAP35 chr19 47507532 + COL12A1 chr6 75794907 - Exonic hg19 STAD TCGA-CG-5721-01A 3 0 Out-of-frame Inter-chr q13.32 Transcription factor q14.1 50827 ChimerSeq STARFusion TCGA_RNA-Seq BMPR2-DTNB BMPR2 chr2 203332412 + DTNB chr2 25705742 - Exonic hg19 STAD TCGA-CG-5721-01A 3 0 3'UTR-CDS Intra-chr q33.1 TKL:STKR Tumor suppressor gene p23.3 50828 ChimerSeq STARFusion TCGA_RNA-Seq CCT4-EEF2 CCT4 chr2 62104595 - EEF2 chr19 3982053 - Exonic hg19 STAD TCGA-CG-5721-01A 3 0 Out-of-frame Inter-chr p15 p13.3 50829 ChimerSeq STARFusion TCGA_RNA-Seq CD163-PGK1 CD163 chr12 7623936 - PGK1 chrX 77359813 + Exonic hg19 STAD TCGA-CG-5721-01A 3 0 Out-of-frame Inter-chr p13.31 q21.1 50830 ChimerSeq STARFusion TCGA_RNA-Seq FKBP15-FARSB FKBP15 chr9 115983471 - FARSB chr2 223436741 - Exonic hg19 STAD TCGA-CG-5721-01A 3 0 Out-of-frame Inter-chr q32 q36.1 Seq+ 50831 ChimerSeq STARFusion TCGA_RNA-Seq LDLR-ECSIT LDLR chr19 11200291 + ECSIT chr19 11617243 - Exonic hg19 STAD TCGA-CG-5721-01A 3 0 In-Frame Intra-chr p13.2 p13.2 50832 ChimerSeq STARFusion TCGA_RNA-Seq MRPL4-TRIM26 MRPL4 chr19 10370369 + TRIM26 chr6 30154297 - Exonic hg19 STAD TCGA-CG-5721-01A 3 0 Out-of-frame Inter-chr p13.2 50833 ChimerSeq STARFusion TCGA_RNA-Seq RAD51C-RPIA RAD51C chr17 56770046 + RPIA chr2 89028796 + Exonic hg19 STAD TCGA-CG-5721-01A 3 0 Out-of-frame Inter-chr q22 Tumor suppressor gene p11.2 50834 ChimerSeq STARFusion TCGA_RNA-Seq SAFB2-COLGALT1 SAFB2 chr19 5622627 - COLGALT1 chr19 17693826 + Exonic hg19 STAD TCGA-CG-5721-01A 3 0 Out-of-frame Intra-chr p13.3 Tumor suppressor gene Transcription factor p13.11 50835 ChimerSeq STARFusion TCGA_RNA-Seq SPCS1-SNORA7 SPCS1 chr3 52742176 + SNORA7 chr14 75178736 + Exonic hg19 STAD TCGA-CG-5721-01A 3 0 Out-of-frame Inter-chr p21.1 q24.3 50836 ChimerSeq STARFusion TCGA_RNA-Seq SQRDL-CD74 SQRDL chr15 45968371 + CD74 chr5 149792314 - Exonic hg19 STAD TCGA-CG-5721-01A 3 0 Out-of-frame Inter-chr q33.1 50837 ChimerSeq STARFusion TCGA_RNA-Seq STAG2-PRELID1 STAG2 chrX 123234775 + PRELID1 chr5 176733498 + Exonic hg19 STAD TCGA-CG-5721-01A 3 0 Out-of-frame Inter-chr q25 Oncogene q35.3 50838 ChimerSeq STARFusion TCGA_RNA-Seq TMSB10-TRABD2A TMSB10 chr2 85133731 + TRABD2A chr2 85133796 - Exonic hg19 STAD TCGA-CG-5721-01A 3 0 Out-of-frame Intra-chr p11.2 p11.2 50839 ChimerSeq STARFusion TCGA_RNA-Seq ZNF274-GDAP2 ZNF274 chr19 58698409 + GDAP2 chr1 118413238 - Exonic hg19 STAD TCGA-CG-5721-01A 3 0 Out-of-frame Inter-chr q13.43 Transcription factor p12 50840 ChimerSeq STARFusion TCGA_RNA-Seq MAP4K1-SUMF2 MAP4K1 chr19 39106835 - SUMF2 chr7 56144527 + Exonic hg19 STAD TCGA-CG-5721-01A 2 1 In-Frame Inter-chr Tumor suppressor gene p11.2 50841 ChimerSeq STARFusion TCGA_RNA-Seq ACER3-FAM98B ACER3 chr11 76572123 + FAM98B chr15 38756233 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 Out-of-frame Inter-chr q13.5 q14 50842 ChimerSeq STARFusion TCGA_RNA-Seq AFF1-EIF3H AFF1 chr4 87869723 + EIF3H chr8 117669553 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 Out-of-frame Inter-chr q21.3 Oncogene q24.11 50843 ChimerSeq STARFusion TCGA_RNA-Seq AGFG1-WIPF1 AGFG1 chr2 228401709 + WIPF1 chr2 175440108 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 In-Frame Intra-chr q36.3 q31.1 50844 ChimerSeq STARFusion TCGA_RNA-Seq AKR1A1-C19orf53 AKR1A1 chr1 46032692 + C19orf53 chr19 13888866 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 Out-of-frame Inter-chr p34.1 p13.13 50845 ChimerSeq STARFusion TCGA_RNA-Seq ALG14-ABCD3 ALG14 chr1 95530422 - ABCD3 chr1 94953098 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 In-Frame Intra-chr p21.3 p21.3 50846 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD27-FLNB ANKRD27 chr19 33135231 - FLNB chr3 58118535 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 Out-of-frame Inter-chr q13.11 p14.3 50847 ChimerSeq STARFusion TCGA_RNA-Seq ANXA11-MXI1 ANXA11 chr10 81965099 - MXI1 chr10 111987947 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 5'UTR-5'UTR Intra-chr q22.3 q25.2 Tumor suppressor gene Transcription factor 50848 ChimerSeq STARFusion TCGA_RNA-Seq ATP5C1-BCAS4 ATP5C1 chr10 7844817 + BCAS4 chr20 49493023 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 Out-of-frame Inter-chr p14 q13.13 50849 ChimerSeq STARFusion TCGA_RNA-Seq C17orf62-WBSCR27 C17orf62 chr17 80408075 - WBSCR27 chr7 73249410 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 Out-of-frame Inter-chr q25.3 50850 ChimerSeq STARFusion TCGA_RNA-Seq C1orf63-PKM C1orf63 chr1 25571641 - PKM chr15 72494961 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 Out-of-frame Inter-chr q23 50851 ChimerSeq STARFusion TCGA_RNA-Seq C22orf34-CDCA7 C22orf34 chr22 50051053 - CDCA7 chr2 174223440 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 3'UTR-CDS Inter-chr q13.33 q31.1 50852 ChimerSeq STARFusion TCGA_RNA-Seq C3orf27-SCNM1 C3orf27 chr3 128294109 - SCNM1 chr1 151138947 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 5'UTR-5'UTR Inter-chr q21.3 50853 ChimerSeq STARFusion TCGA_RNA-Seq C8orf76-PDE3A C8orf76 chr8 124238740 - PDE3A chr12 20709594 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 In-Frame Inter-chr q24.13 p12.2 50854 ChimerSeq STARFusion TCGA_RNA-Seq CASC2-CACUL1 CASC2 chr10 119811707 + CACUL1 chr10 120489922 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 Out-of-frame Intra-chr q26.11 Tumor suppressor gene q26.11 50855 ChimerSeq STARFusion TCGA_RNA-Seq CHD2-WNK2 CHD2 chr15 93444529 + WNK2 chr9 96079802 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 Out-of-frame Inter-chr q26.1 q22.31 Tumor suppressor gene 50856 ChimerSeq STARFusion TCGA_RNA-Seq CHSY3-ANKH CHSY3 chr5 129244053 + ANKH chr5 14769300 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 In-Frame Intra-chr q23.3 p15.2 50857 ChimerSeq STARFusion TCGA_RNA-Seq COQ4-ZNF79 COQ4 chr9 131088160 + ZNF79 chr9 130206308 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 Out-of-frame Intra-chr q34.11 q33.3 Transcription factor 50858 ChimerSeq STARFusion TCGA_RNA-Seq DMWD-LIMS1 DMWD chr19 46294163 - LIMS1 chr2 109300341 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 Out-of-frame Inter-chr q13.32 q12.3 50859 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC1-NEBL DNAJC1 chr10 22171211 - NEBL chr10 21076237 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 Out-of-frame Intra-chr p12.31 p12.31 50860 ChimerSeq STARFusion TCGA_RNA-Seq DNASE1-CLUAP1 DNASE1 chr16 3662007 + CLUAP1 chr16 3554720 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 5'UTR-CDS Intra-chr p13.3 p13.3 50861 ChimerSeq STARFusion TCGA_RNA-Seq EEF1B2-ABCF2 EEF1B2 chr2 207026196 + ABCF2 chr7 150913115 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 In-Frame Inter-chr q36.1 50862 ChimerSeq STARFusion TCGA_RNA-Seq FAM172A-USP10 FAM172A chr5 93447216 - USP10 chr16 84773915 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 5'UTR-CDS Inter-chr q15 Tumor suppressor gene q24.1 50863 ChimerSeq STARFusion TCGA_RNA-Seq FAM208B-GDI2 FAM208B chr10 5803434 + GDI2 chr10 5810347 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 Out-of-frame Intra-chr p15.1 p15.1 50864 ChimerSeq STARFusion TCGA_RNA-Seq FAM49B-ASAP1 FAM49B chr8 130915558 - ASAP1 chr8 131249240 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 5'UTR-CDS Intra-chr q24.21 q24.22 Seq+ 50865 ChimerSeq STARFusion TCGA_RNA-Seq FGFR1OP2-MRPS35 FGFR1OP2 chr12 27091643 + MRPS35 chr12 27888380 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 5'UTR-CDS Intra-chr p11.23 p11.22 50866 ChimerSeq STARFusion TCGA_RNA-Seq GALNT18-FAM110B GALNT18 chr11 11454168 - FAM110B chr8 58988094 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 Out-of-frame Inter-chr p15.4 q12.1 50867 ChimerSeq STARFusion TCGA_RNA-Seq ITM2B-TPT1 ITM2B chr13 48828072 + TPT1 chr13 45911523 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 In-Frame Intra-chr q14.2 q14.13 50868 ChimerSeq STARFusion TCGA_RNA-Seq MLTK-DHRS7B MLTK chr2 173955918 + DHRS7B chr17 21081546 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 Out-of-frame Inter-chr p11.2 50869 ChimerSeq STARFusion TCGA_RNA-Seq NAA20-RABGGTA NAA20 chr20 20003124 + RABGGTA chr14 24737825 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 In-Frame Inter-chr p11.23 q12 50870 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 125051854 - SCARB1 chr12 125302253 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 50871 ChimerSeq STARFusion TCGA_RNA-Seq NEBL-TNKS NEBL chr10 21250601 - TNKS chr8 9577884 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 In-Frame Inter-chr p12.31 p23.1 50872 ChimerSeq STARFusion TCGA_RNA-Seq NELFA-RGS12 NELFA chr4 2010477 - RGS12 chr4 3344664 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 Out-of-frame Intra-chr p16.3 p16.3 50873 ChimerSeq STARFusion TCGA_RNA-Seq NRP1-ATE1 NRP1 chr10 33619636 - ATE1 chr10 123549804 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 Out-of-frame Intra-chr p11.22 q26.13 50874 ChimerSeq STARFusion TCGA_RNA-Seq PBX4-GAPVD1 PBX4 chr19 19675742 - GAPVD1 chr9 128099297 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 In-Frame Inter-chr p13.11 Transcription factor q33.3 50875 ChimerSeq STARFusion TCGA_RNA-Seq PPP3CA-SFPQ PPP3CA chr4 102267896 - SFPQ chr1 35643637 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 CDS-3'UTR Inter-chr q24 p34.3 50876 ChimerSeq STARFusion TCGA_RNA-Seq PSORS1C1-OBSCN PSORS1C1 chr6 31082668 + OBSCN chr1 228430884 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 5'UTR-CDS Inter-chr q42.13 50877 ChimerSeq STARFusion TCGA_RNA-Seq PTDSS2-CBX7 PTDSS2 chr11 479152 + CBX7 chr22 39537441 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 Out-of-frame Inter-chr q13.1 50878 ChimerSeq STARFusion TCGA_RNA-Seq RALGDS-RNF213 RALGDS chr9 136024350 - RNF213 chr17 78237373 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 CDS-5'UTR Inter-chr q34.2 Oncogene q25.3 Oncogene 50879 ChimerSeq STARFusion TCGA_RNA-Seq RBM10-SUPT5H RBM10 chrX 47006897 + SUPT5H chr19 39963843 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 In-Frame Inter-chr p11.3 q13.2 50880 ChimerSeq STARFusion TCGA_RNA-Seq RCBTB1-TRIM27 RCBTB1 chr13 50134054 - TRIM27 chr6 28872442 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 Out-of-frame Inter-chr q14.2 50881 ChimerSeq STARFusion TCGA_RNA-Seq RPL14-ARIH2 RPL14 chr3 40498965 + ARIH2 chr3 48960181 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 CDS-5'UTR Intra-chr p22.1 p21.31 50882 ChimerSeq STARFusion TCGA_RNA-Seq SCARNA17-ADSSL1 SCARNA17 chr18 47340432 + ADSSL1 chr14 105201357 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 5'UTR-CDS Inter-chr q21.1 q32.33 50883 ChimerSeq STARFusion TCGA_RNA-Seq SF1-CAMTA1 SF1 chr11 64543970 - CAMTA1 chr1 6947714 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 Out-of-frame Inter-chr q13.1 p36.31 Tumor suppressor gene Transcription factor 50884 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A36-CLDN1 SLC25A36 chr3 140678382 + CLDN1 chr3 190030825 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 Out-of-frame Intra-chr q23 q28 Tumor suppressor gene 50885 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-ANP32A SLC7A5 chr16 87902491 - ANP32A chr15 69080258 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 Out-of-frame Inter-chr q24.2 q23 Tumor suppressor gene 50886 ChimerSeq STARFusion TCGA_RNA-Seq SMURF2-BPTF SMURF2 chr17 62587202 - BPTF chr17 65899905 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 Out-of-frame Intra-chr q24.1 q24.2 Transcription factor 50887 ChimerSeq STARFusion TCGA_RNA-Seq STRIP1-PSMA5 STRIP1 chr1 110580582 + PSMA5 chr1 109957985 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 Out-of-frame Intra-chr p13.3 p13.3 50888 ChimerSeq STARFusion TCGA_RNA-Seq SUGP2-CLPTM1L SUGP2 chr19 19114977 - CLPTM1L chr5 1318568 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 Out-of-frame Inter-chr p13.11 p15.33 50889 ChimerSeq STARFusion TCGA_RNA-Seq TAP1-WDR4 TAP1 chr6 32818097 - WDR4 chr21 44263391 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 CDS-3'UTR Inter-chr p21.32 Tumor suppressor gene q22.3 50890 ChimerSeq STARFusion TCGA_RNA-Seq TBCA-SCAMP1 TBCA chr5 77072029 - SCAMP1 chr5 77745757 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 Out-of-frame Intra-chr q14.1 q14.1 50891 ChimerSeq STARFusion TCGA_RNA-Seq TBL1X-PNPLA4 TBL1X chrX 9469889 + PNPLA4 chrX 7890139 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 5'UTR-5'UTR Intra-chr p22.31 p22.31 50892 ChimerSeq STARFusion TCGA_RNA-Seq THAP6-BCLAF1 THAP6 chr4 76465169 + BCLAF1 chr6 136582615 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 3'UTR-CDS Inter-chr q21.1 Transcription factor q23.3 50893 ChimerSeq STARFusion TCGA_RNA-Seq TMTC4-CAPZB TMTC4 chr13 101315218 - CAPZB chr1 19746244 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 In-Frame Inter-chr q32.3 p36.13 50894 ChimerSeq STARFusion TCGA_RNA-Seq TYMP-RPS2 TYMP chr22 50966941 - RPS2 chr16 2013257 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 In-Frame Inter-chr q13.33 p13.3 50895 ChimerSeq STARFusion TCGA_RNA-Seq UQCRC2-SLC18B1 UQCRC2 chr16 21987564 + SLC18B1 chr6 133092268 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 In-Frame Inter-chr q23.2 50896 ChimerSeq STARFusion TCGA_RNA-Seq WARS-WDR25 WARS chr14 100842597 - WDR25 chr14 100847247 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 5'UTR-5'UTR Intra-chr q32.2 q32.2 50897 ChimerSeq STARFusion TCGA_RNA-Seq YEATS2-KLHL24 YEATS2 chr3 183442319 + KLHL24 chr3 183368084 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 CDS-5'UTR Intra-chr q27.1 q27.1 50898 ChimerSeq STARFusion TCGA_RNA-Seq ZFP90-CDH3 ZFP90 chr16 68592471 + CDH3 chr16 68710288 + Exonic hg19 STAD TCGA-CG-5721-01A 2 0 In-Frame Intra-chr q22.1 Transcription factor q22.1 50899 ChimerSeq STARFusion TCGA_RNA-Seq ZMIZ1-STK32C ZMIZ1 chr10 80829027 + STK32C chr10 134041632 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 5'UTR-CDS Intra-chr q22.3 q26.3 50900 ChimerSeq STARFusion TCGA_RNA-Seq ZMYM4-ACACA ZMYM4 chr1 35734686 + ACACA chr17 35538297 - Exonic hg19 STAD TCGA-CG-5721-01A 2 0 In-Frame Inter-chr p34.3 50901 ChimerSeq STARFusion TCGA_RNA-Seq PNPLA2-EPS8L2 PNPLA2 chr11 822606 + EPS8L2 chr11 720062 + Exonic hg19 STAD TCGA-BR-8485-01A 30 22 In-Frame Intra-chr p15.5 p15.5 Seq+ 50902 ChimerSeq STARFusion TCGA_RNA-Seq SSX4-IGL@ SSX4 chrX 48244874 + IGL@ chr22 23241803 + Exonic hg19 STAD TCGA-BR-8485-01A 22 0 Out-of-frame Inter-chr p11.23 q11.22 50903 ChimerSeq STARFusion TCGA_RNA-Seq SSX4-IGLC2 SSX4 chrX 48244874 + IGLC2 chr22 23241803 + Exonic hg19 STAD TCGA-BR-8485-01A 22 0 Out-of-frame Inter-chr p11.23 q11.22 50904 ChimerSeq STARFusion TCGA_RNA-Seq SSX4-IGLJ2 SSX4 chrX 48244874 + IGLJ2 chr22 23241803 + Exonic hg19 STAD TCGA-BR-8485-01A 22 0 Out-of-frame Inter-chr p11.23 q11.22 50905 ChimerSeq STARFusion TCGA_RNA-Seq CAB39-GBF1 CAB39 chr2 231577945 + GBF1 chr10 104125154 + Exonic hg19 STAD TCGA-BR-8485-01A 17 17 5'UTR-CDS Inter-chr q37.1 q24.32 Seq+ 50906 ChimerSeq STARFusion TCGA_RNA-Seq TARDBP-IGH@ TARDBP chr1 11073961 + IGH@ chr14 106330470 - Exonic hg19 STAD TCGA-BR-8485-01A 20 3 Out-of-frame Inter-chr p36.22 32.33 50907 ChimerSeq STARFusion TCGA_RNA-Seq TARDBP-IGHG3 TARDBP chr1 11073961 + IGHG3 chr14 106330470 - Exonic hg19 STAD TCGA-BR-8485-01A 20 1 Out-of-frame Inter-chr p36.22 50908 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-ZNF704 TPD52 chr8 81083660 - ZNF704 chr8 81555364 - Exonic hg19 STAD TCGA-BR-8485-01A 14 24 Out-of-frame Intra-chr q21.13 q21.13 Transcription factor Seq+ 50909 ChimerSeq STARFusion TCGA_RNA-Seq FLNB-GON4L FLNB chr3 57994583 + GON4L chr1 155737332 - Exonic hg19 STAD TCGA-BR-8485-01A 14 15 Out-of-frame Inter-chr p14.3 q22 Seq+ 50910 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-TRAPPC9 AGO2 chr8 141645584 - TRAPPC9 chr8 141461482 - Exonic hg19 STAD TCGA-BR-8485-01A 10 11 Out-of-frame Intra-chr q24.3 q24.3 50911 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-ZNF704 TPD52 chr8 81083660 - ZNF704 chr8 81553712 - Exonic hg19 STAD TCGA-BR-8485-01A 5 24 Out-of-frame Intra-chr q21.13 q21.13 Transcription factor Seq+ 50912 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-TRAPPC9 AGO2 chr8 141554312 - TRAPPC9 chr8 141034176 - Exonic hg19 STAD TCGA-BR-8485-01A 6 11 Out-of-frame Intra-chr q24.3 q24.3 50913 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-COL4A1 IGH@ chr14 106208678 - COL4A1 chr13 110850978 - Exonic hg19 STAD TCGA-BR-8485-01A 2 26 Out-of-frame Inter-chr 32.33 q34 50914 ChimerSeq STARFusion TCGA_RNA-Seq FNIP2-IGH@ FNIP2 chr4 159757024 + IGH@ chr14 106209410 - Exonic hg19 STAD TCGA-BR-8485-01A 7 4 Out-of-frame Inter-chr q32.1 32.33 50915 ChimerSeq STARFusion TCGA_RNA-Seq FNIP2-IGHG1 FNIP2 chr4 159757024 + IGHG1 chr14 106209410 - Exonic hg19 STAD TCGA-BR-8485-01A 7 3 Out-of-frame Inter-chr q32.1 q32.33 50916 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-COL4A1 IGHG1 chr14 106208678 - COL4A1 chr13 110850978 - Exonic hg19 STAD TCGA-BR-8485-01A 2 21 Out-of-frame Inter-chr q32.33 q34 Seq+ 50917 ChimerSeq STARFusion TCGA_RNA-Seq AP3D1-ABHD17A AP3D1 chr19 2115232 - ABHD17A chr19 1881913 - Exonic hg19 STAD TCGA-BR-8485-01A 6 3 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 50918 ChimerSeq STARFusion TCGA_RNA-Seq ILF3-C19orf38 ILF3 chr19 10765799 + C19orf38 chr19 10959117 + Exonic hg19 STAD TCGA-BR-8485-01A 5 5 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 50919 ChimerSeq STARFusion TCGA_RNA-Seq KCTD7-TMEM248 KCTD7 chr7 66270383 + TMEM248 chr7 66406835 + Exonic hg19 STAD TCGA-BR-8485-01A 6 1 Out-of-frame Intra-chr q11.21 q11.21 50920 ChimerSeq STARFusion TCGA_RNA-Seq RABGEF1-TMEM248 RABGEF1 chr7 66270383 + TMEM248 chr7 66406835 + Exonic hg19 STAD TCGA-BR-8485-01A 6 1 Out-of-frame Intra-chr q11.21 q11.21 50921 ChimerSeq STARFusion TCGA_RNA-Seq SART1-MUS81 SART1 chr11 65740803 + MUS81 chr11 65631257 + Exonic hg19 STAD TCGA-BR-8485-01A 4 7 Out-of-frame Intra-chr q13.1 q13.1 Tumor suppressor gene 50922 ChimerSeq STARFusion TCGA_RNA-Seq UBE3C-DNAJB6 UBE3C chr7 157000629 + DNAJB6 chr7 157151241 + Exonic hg19 STAD TCGA-BR-8485-01A 5 3 CDS-5'UTR Intra-chr q36.3 q36.3 Seq+ 50923 ChimerSeq STARFusion TCGA_RNA-Seq ILF3-C19orf38 ILF3 chr19 10765163 + C19orf38 chr19 10959117 + Exonic hg19 STAD TCGA-BR-8485-01A 4 5 5'UTR-5'UTR Intra-chr p13.2 p13.2 Seq+ 50924 ChimerSeq STARFusion TCGA_RNA-Seq FANCA-ANKRD11 FANCA chr16 89812992 - ANKRD11 chr16 89484776 - Exonic hg19 STAD TCGA-BR-8485-01A 4 3 CDS-5'UTR Intra-chr q24.3 Oncogene q24.3 Seq+ 50925 ChimerSeq STARFusion TCGA_RNA-Seq SUZ12P-VPS37B SUZ12P chr17 29059141 + VPS37B chr12 123355943 - Exonic hg19 STAD TCGA-BR-8485-01A 3 6 Out-of-frame Inter-chr q24.31 50926 ChimerSeq STARFusion TCGA_RNA-Seq ROCK2-ASAP2 ROCK2 chr2 11338617 - ASAP2 chr2 9419446 + Exonic hg19 STAD TCGA-HU-A4GU-01A 28 5 In-Frame Intra-chr p25.1 AGC:DMPK p25.1 Seq+ 50927 ChimerSeq STARFusion TCGA_RNA-Seq RACGAP1-FAIM2 RACGAP1 chr12 50419181 - FAIM2 chr12 50297765 - Exonic hg19 STAD TCGA-HU-A4GU-01A 7 5 5'UTR-5'UTR Intra-chr q13.12 q13.12 Seq+ 50928 ChimerSeq STARFusion TCGA_RNA-Seq SNORD3A-UNC5B SNORD3A chr17 19091453 + UNC5B chr10 73050759 + Exonic hg19 STAD TCGA-FP-8210-01A 21 0 Out-of-frame Inter-chr p11.2 q22.1 Tumor suppressor gene 50929 ChimerSeq STARFusion TCGA_RNA-Seq B3GALNT2-PCNXL2 B3GALNT2 chr1 235667441 - PCNXL2 chr1 233398909 - Exonic hg19 STAD TCGA-FP-8210-01A 4 0 Out-of-frame Intra-chr 50930 ChimerSeq STARFusion TCGA_RNA-Seq NSD1-ZNF346 NSD1 chr5 176563031 + ZNF346 chr5 176506383 + Exonic hg19 STAD TCGA-FP-8210-01A 4 0 CDS-3'UTR Intra-chr q35.3 Oncogene q35.2 Transcription factor Seq+ 50931 ChimerSeq STARFusion TCGA_RNA-Seq CARS-UBC CARS chr11 3078573 - UBC chr12 125398320 - Exonic hg19 STAD TCGA-FP-8210-01A 3 0 CDS-5'UTR Inter-chr q24.31 Seq+ 50932 ChimerSeq STARFusion TCGA_RNA-Seq EIF3I-GSTK1 EIF3I chr1 32697130 + GSTK1 chr7 142965882 + Exonic hg19 STAD TCGA-FP-8210-01A 3 0 Out-of-frame Inter-chr p35.2 q34 50933 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-CPNE8 ETV6 chr12 11905513 + CPNE8 chr12 39047872 - Exonic hg19 STAD TCGA-FP-8210-01A 3 0 Out-of-frame Intra-chr p13.2 Tumor suppressor gene Transcription factor q12 50934 ChimerSeq STARFusion TCGA_RNA-Seq FUS-RPS12 FUS chr16 31196463 + RPS12 chr6 133136157 + Exonic hg19 STAD TCGA-FP-8210-01A 3 0 Out-of-frame Inter-chr p11.2 Tumor suppressor gene q23.2 50935 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPA1P33-MALAT1 HNRNPA1P33 chr10 47133579 - MALAT1 chr11 65266568 + Exonic hg19 STAD TCGA-FP-8210-01A 3 0 Out-of-frame Inter-chr q11.22 q13.1 50936 ChimerSeq STARFusion TCGA_RNA-Seq MAST4-EPAS1 MAST4 chr5 66350320 + EPAS1 chr2 46574012 + Exonic hg19 STAD TCGA-FP-8210-01A 3 0 Out-of-frame Inter-chr q12.3 AGC:MAST p21 Tumor suppressor gene Transcription factor 50937 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-FAM178A NIPBL chr5 36877280 + FAM178A chr10 102675756 + Exonic hg19 STAD TCGA-FP-8210-01A 3 0 5'UTR-CDS Inter-chr p13.2 50938 ChimerSeq STARFusion TCGA_RNA-Seq ORMDL3-AAK1 ORMDL3 chr17 38078201 - AAK1 chr2 69736528 - Exonic hg19 STAD TCGA-FP-8210-01A 3 0 Out-of-frame Inter-chr q21.1 p13.3 Other:NAK 50939 ChimerSeq STARFusion TCGA_RNA-Seq PHACTR1-SMOC2 PHACTR1 chr6 12957776 + SMOC2 chr6 168999498 + Exonic hg19 STAD TCGA-FP-8210-01A 3 0 Out-of-frame Intra-chr q27 50940 ChimerSeq STARFusion TCGA_RNA-Seq SPEN-CEPT1 SPEN chr1 16174645 + CEPT1 chr1 111690264 + Exonic hg19 STAD TCGA-FP-8210-01A 3 0 CDS-5'UTR Intra-chr p36.21 Transcription factor p13.3 50941 ChimerSeq STARFusion TCGA_RNA-Seq SRGN-PMVK SRGN chr10 70864319 + PMVK chr1 154897568 - Exonic hg19 STAD TCGA-FP-8210-01A 3 0 Out-of-frame Inter-chr q22.1 q21.3 50942 ChimerSeq STARFusion TCGA_RNA-Seq ADRBK1-CDC42EP1 ADRBK1 chr11 67034283 + CDC42EP1 chr22 37962079 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 CDS-5'UTR Inter-chr q13.1 50943 ChimerSeq STARFusion TCGA_RNA-Seq ANKAR-TRIP12 ANKAR chr2 190539556 + TRIP12 chr2 230683228 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 5'UTR-CDS Intra-chr q32.2 q36.3 50944 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD12-L3MBTL4 ANKRD12 chr18 9182517 + L3MBTL4 chr18 6312055 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 CDS-5'UTR Intra-chr p11.22 p11.31 Tumor suppressor gene Transcription factor 50945 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD30BL-IL21R ANKRD30BL chr2 133015102 - IL21R chr16 27441377 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 3'UTR-CDS Inter-chr q21.2 p12.1 Oncogene 50946 ChimerSeq STARFusion TCGA_RNA-Seq ATP11B-PVRL3 ATP11B chr3 182511574 + PVRL3 chr3 110863746 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 Out-of-frame Intra-chr q26.33 Oncogene 50947 ChimerSeq STARFusion TCGA_RNA-Seq C2orf69-ARHGAP15 C2orf69 chr2 200776494 + ARHGAP15 chr2 144193170 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 In-Frame Intra-chr q33.1 q22.2 50948 ChimerSeq STARFusion TCGA_RNA-Seq C5orf56-COMMD6 C5orf56 chr5 131785381 + COMMD6 chr13 76100775 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 5'UTR-CDS Inter-chr q31.1 q22.2 50949 ChimerSeq STARFusion TCGA_RNA-Seq CACNA1G-CREBBP CACNA1G chr17 48701890 + CREBBP chr16 3781938 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 In-Frame Inter-chr q21.33 p13.3 Oncogene Tumor suppressor gene 50950 ChimerSeq STARFusion TCGA_RNA-Seq CD2AP-CDC5L CD2AP chr6 47471176 + CDC5L chr6 44413392 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 CDS-5'UTR Intra-chr p12.3 p21.1 Transcription factor 50951 ChimerSeq STARFusion TCGA_RNA-Seq CDC42BPB-BAG5 CDC42BPB chr14 103478434 - BAG5 chr14 104027529 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 Out-of-frame Intra-chr q32.32 q32.33 50952 ChimerSeq STARFusion TCGA_RNA-Seq CDYL-SSR1 CDYL chr6 4777041 + SSR1 chr6 7269387 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 CDS-3'UTR Intra-chr p25.1 p24.3 50953 ChimerSeq STARFusion TCGA_RNA-Seq CTNNB1-DGKG CTNNB1 chr3 41278200 + DGKG chr3 185997762 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 In-Frame Intra-chr p22.1 Oncogene q27.3 50954 ChimerSeq STARFusion TCGA_RNA-Seq DDIT4-RASGRF2 DDIT4 chr10 74033818 + RASGRF2 chr5 80388620 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 5'UTR-CDS Inter-chr q22.1 q14.1 Seq+ 50955 ChimerSeq STARFusion TCGA_RNA-Seq DYNC1I1-HERPUD2 DYNC1I1 chr7 95709800 + HERPUD2 chr7 35678082 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 Out-of-frame Intra-chr q21.3 p14.2 50956 ChimerSeq STARFusion TCGA_RNA-Seq EGFL7-NOC4L EGFL7 chr9 139559237 + NOC4L chr12 132635526 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 5'UTR-CDS Inter-chr q34.3 q24.33 50957 ChimerSeq STARFusion TCGA_RNA-Seq EIF3J-SPG11 EIF3J chr15 44843720 + SPG11 chr15 44855499 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 Out-of-frame Intra-chr q21.1 q21.1 50958 ChimerSeq STARFusion TCGA_RNA-Seq ELK3-NEDD1 ELK3 chr12 96617551 + NEDD1 chr12 97311399 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 In-Frame Intra-chr q23.1 Transcription factor q23.1 50959 ChimerSeq STARFusion TCGA_RNA-Seq ELMO1-ZC3HAV1 ELMO1 chr7 37488278 - ZC3HAV1 chr7 138740041 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 5'UTR-CDS Intra-chr p14.1 q34 50960 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-GUK1 ERBB2 chr17 37872192 + GUK1 chr1 228333727 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 In-Frame Inter-chr q12 Oncogene q42.13 50961 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-ITM2B ETV6 chr12 11803094 + ITM2B chr13 48827944 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q14.2 50962 ChimerSeq STARFusion TCGA_RNA-Seq EVI5-MIR31HG EVI5 chr1 93201955 - MIR31HG chr9 21455943 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 CDS-3'UTR Inter-chr p22.1 p21.3 50963 ChimerSeq STARFusion TCGA_RNA-Seq GLTSCR1L-PDXK GLTSCR1L chr6 42749839 + PDXK chr21 45152020 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 Out-of-frame Inter-chr q22.3 50964 ChimerSeq STARFusion TCGA_RNA-Seq GLUD1-MLPH GLUD1 chr10 88834308 - MLPH chr2 238427182 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 In-Frame Inter-chr q23.2 q37.3 50965 ChimerSeq STARFusion TCGA_RNA-Seq GPR65-CNOT10 GPR65 chr14 88471566 + CNOT10 chr3 32800950 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 5'UTR-5'UTR Inter-chr q31.3 p22.3 50966 ChimerSeq STARFusion TCGA_RNA-Seq GRID1-MBNL1 GRID1 chr10 87898576 - MBNL1 chr3 152132730 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 In-Frame Inter-chr q23.2 q25.1 50967 ChimerSeq STARFusion TCGA_RNA-Seq HIVEP2-SGPP2 HIVEP2 chr6 143158072 - SGPP2 chr2 223339287 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 5'UTR-CDS Inter-chr q24.2 Transcription factor q36.1 50968 ChimerSeq STARFusion TCGA_RNA-Seq IQCB1-ATRX IQCB1 chr3 121544898 - ATRX chrX 76764107 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 In-Frame Inter-chr q13.33 q21.1 Oncogene 50969 ChimerSeq STARFusion TCGA_RNA-Seq JHDM1D-RARA JHDM1D chr7 139876544 - RARA chr17 38504568 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 Out-of-frame Inter-chr q21.2 Oncogene Transcription factor 50970 ChimerSeq STARFusion TCGA_RNA-Seq LYRM1-PDE3A LYRM1 chr16 20927036 + PDE3A chr12 20709594 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 In-Frame Inter-chr p12.3 p12.2 50971 ChimerSeq STARFusion TCGA_RNA-Seq MAML3-SCOC MAML3 chr4 141074014 - SCOC chr4 141300275 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 50972 ChimerSeq STARFusion TCGA_RNA-Seq MAST3-PIH1D1 MAST3 chr19 18258434 + PIH1D1 chr19 49950356 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 Out-of-frame Intra-chr p13.11 AGC:MAST q13.33 50973 ChimerSeq STARFusion TCGA_RNA-Seq MEF2A-PICALM MEF2A chr15 100250965 + PICALM chr11 85742653 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 Out-of-frame Inter-chr q26.3 Transcription factor q14.2 50974 ChimerSeq STARFusion TCGA_RNA-Seq NBAS-WDR70 NBAS chr2 15691617 - WDR70 chr5 37438024 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 Out-of-frame Inter-chr p24.3 p13.2 50975 ChimerSeq STARFusion TCGA_RNA-Seq NBEA-SMAD9 NBEA chr13 35785316 + SMAD9 chr13 37454012 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 CDS-5'UTR Intra-chr q13.3 q13.3 Transcription factor 50976 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL10-FOXP1 OSBPL10 chr3 31917925 - FOXP1 chr3 71161788 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 In-Frame Intra-chr p22.3 p13 Oncogene Tumor suppressor gene Transcription factor 50977 ChimerSeq STARFusion TCGA_RNA-Seq PDE3B-RHOH PDE3B chr11 14666599 + RHOH chr4 40244334 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 CDS-5'UTR Inter-chr p15.2 p14 Oncogene Seq+ 50978 ChimerSeq STARFusion TCGA_RNA-Seq PDLIM7-ZMIZ1 PDLIM7 chr5 176919406 - ZMIZ1 chr10 81072399 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 In-Frame Inter-chr q35.3 q22.3 50979 ChimerSeq STARFusion TCGA_RNA-Seq PKD1-PBX4 PKD1 chr16 2147149 - PBX4 chr19 19681642 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 Out-of-frame Inter-chr p13.3 CAMK:PKD Tumor suppressor gene p13.11 Transcription factor 50980 ChimerSeq STARFusion TCGA_RNA-Seq PRSS23-AKT1 PRSS23 chr11 86534635 + AKT1 chr14 105237184 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 3'UTR-CDS Inter-chr q14.2 q32.33 AGC:Akt Oncogene 50981 ChimerSeq STARFusion TCGA_RNA-Seq RAMP1-C9orf3 RAMP1 chr2 238768370 + C9orf3 chr9 97848964 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 CDS-3'UTR Inter-chr q37.3 q22.32 50982 ChimerSeq STARFusion TCGA_RNA-Seq RASAL2-CSDE1 RASAL2 chr1 178269253 + CSDE1 chr1 115292828 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 CDS-5'UTR Intra-chr q25.2 Tumor suppressor gene p13.2 50983 ChimerSeq STARFusion TCGA_RNA-Seq RBFOX3-GNAS RBFOX3 chr17 77478536 - GNAS chr20 57470667 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 5'UTR-5'UTR Inter-chr q25.3 q13.32 Oncogene 50984 ChimerSeq STARFusion TCGA_RNA-Seq RPGR-DMD RPGR chrX 38186593 - DMD chrX 31152311 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 In-Frame Intra-chr p11.4 p21.1 Tumor suppressor gene 50985 ChimerSeq STARFusion TCGA_RNA-Seq SETD2-RNF216 SETD2 chr3 47125210 - RNF216 chr7 5756397 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 In-Frame Inter-chr p21.31 Oncogene Tumor suppressor gene p22.1 Seq+ 50986 ChimerSeq STARFusion TCGA_RNA-Seq SFMBT2-TBCD SFMBT2 chr10 7409611 - TBCD chr17 80828100 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 In-Frame Inter-chr p14 Seq+ 50987 ChimerSeq STARFusion TCGA_RNA-Seq SPATA7-NAA50 SPATA7 chr14 88897569 + NAA50 chr3 113442939 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 In-Frame Inter-chr q31.3 q13.31 50988 ChimerSeq STARFusion TCGA_RNA-Seq SSX2IP-PIGK SSX2IP chr1 85155837 - PIGK chr1 77588044 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 5'UTR-CDS Intra-chr p22.3 p31.1 50989 ChimerSeq STARFusion TCGA_RNA-Seq STAG1-OXSR1 STAG1 chr3 136323151 - OXSR1 chr3 38234773 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 Out-of-frame Intra-chr q22.3 p22.2 50990 ChimerSeq STARFusion TCGA_RNA-Seq STK32C-NNT STK32C chr10 134121076 - NNT chr5 43675613 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 Out-of-frame Inter-chr q26.3 p12 50991 ChimerSeq STARFusion TCGA_RNA-Seq TMEM138-ARHGEF12 TMEM138 chr11 61133688 + ARHGEF12 chr11 120318583 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 Out-of-frame Intra-chr q12.2 q23.3 Tumor suppressor gene 50992 ChimerSeq STARFusion TCGA_RNA-Seq TMEM164-AMMECR1 TMEM164 chrX 109416681 + AMMECR1 chrX 109445764 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 3'UTR-CDS Intra-chr q23 q23 50993 ChimerSeq STARFusion TCGA_RNA-Seq TMEM242-SRSF5 TMEM242 chr6 157739814 - SRSF5 chr14 70237184 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 In-Frame Inter-chr q25.3 q24.1 50994 ChimerSeq STARFusion TCGA_RNA-Seq TNFRSF1B-C12orf75 TNFRSF1B chr1 12254675 + C12orf75 chr12 105764412 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 CDS-3'UTR Inter-chr p36.22 q23.3 50995 ChimerSeq STARFusion TCGA_RNA-Seq TNPO3-TGFBR3 TNPO3 chr7 128694705 - TGFBR3 chr1 92263028 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 Out-of-frame Inter-chr q32.1 p22.1 Tumor suppressor gene 50996 ChimerSeq STARFusion TCGA_RNA-Seq TRAM2-ELOVL5 TRAM2 chr6 52441594 - ELOVL5 chr6 53141054 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 In-Frame Intra-chr p12.2 p12.1 50997 ChimerSeq STARFusion TCGA_RNA-Seq TRIP12-NDUFA10 TRIP12 chr2 230786280 - NDUFA10 chr2 240929599 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 5'UTR-CDS Intra-chr q36.3 50998 ChimerSeq STARFusion TCGA_RNA-Seq TRPS1-ATXN7 TRPS1 chr8 116599228 - ATXN7 chr3 63938055 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 Out-of-frame Inter-chr q23.3 Transcription factor p14.1 50999 ChimerSeq STARFusion TCGA_RNA-Seq UBA2-CCNE1 UBA2 chr19 34919475 + CCNE1 chr19 30308044 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 In-Frame Intra-chr q13.11 q12 Oncogene 51000 ChimerSeq STARFusion TCGA_RNA-Seq VKORC1L1-RAP1GAP VKORC1L1 chr7 65338552 + RAP1GAP chr1 21976289 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 In-Frame Inter-chr q11.21 p36.12 Tumor suppressor gene 51001 ChimerSeq STARFusion TCGA_RNA-Seq ZNF532-RAB14 ZNF532 chr18 56532811 + RAB14 chr9 123955697 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 5'UTR-5'UTR Inter-chr q21.32 Transcription factor q33.2 51002 ChimerSeq STARFusion TCGA_RNA-Seq ZNF83-CCDC9 ZNF83 chr19 53193696 - CCDC9 chr19 47761587 + Exonic hg19 STAD TCGA-FP-8210-01A 2 0 5'UTR-5'UTR Intra-chr q13.41 Transcription factor q13.32 51003 ChimerSeq STARFusion TCGA_RNA-Seq ZNF98-ABCC4 ZNF98 chr19 22715141 - ABCC4 chr13 95863035 - Exonic hg19 STAD TCGA-FP-8210-01A 2 0 5'UTR-CDS Inter-chr p12 Transcription factor q32.1 51004 ChimerSeq STARFusion TCGA_RNA-Seq CCSER2-RGR CCSER2 chr10 86088564 + RGR chr10 86007397 + Exonic hg19 STAD TCGA-FP-A9TM-01A 10 2 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 51005 ChimerSeq STARFusion TCGA_RNA-Seq CHAMP1-COL4A2 CHAMP1 chr13 115086707 + COL4A2 chr13 111160282 + Exonic hg19 STAD TCGA-VQ-A922-01A 103 15 5'UTR-CDS Intra-chr q34 Transcription factor q34 Seq+ 51006 ChimerSeq STARFusion TCGA_RNA-Seq C6orf106-DEFB110 C6orf106 chr6 34614378 - DEFB110 chr6 49976984 - Exonic hg19 STAD TCGA-VQ-A922-01A 50 5 In-Frame Intra-chr p21.31 p12.3 Seq+ 51007 ChimerSeq STARFusion TCGA_RNA-Seq SPTBN1-SPAG5 SPTBN1 chr2 54826380 + SPAG5 chr17 26920084 - Exonic hg19 STAD TCGA-VQ-A922-01A 41 5 In-Frame Inter-chr p16.2 Tumor suppressor gene q11.2 Seq+ 51008 ChimerSeq STARFusion TCGA_RNA-Seq RRBP1-PCSK2 RRBP1 chr20 17596078 - PCSK2 chr20 17462227 + Exonic hg19 STAD TCGA-VQ-A922-01A 30 4 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 51009 ChimerSeq STARFusion TCGA_RNA-Seq PRKCZ-ATAD3C PRKCZ chr1 1991030 + ATAD3C chr1 1403764 + Exonic hg19 STAD TCGA-VQ-A922-01A 30 1 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 51010 ChimerSeq STARFusion TCGA_RNA-Seq GPX4-SPNS3 GPX4 chr19 1105808 + SPNS3 chr17 4381867 + Exonic hg19 STAD TCGA-VQ-A922-01A 27 2 Out-of-frame Inter-chr p13.3 p13.2 Seq+ 51011 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPR-CNR2 HNRNPR chr1 23660011 - CNR2 chr1 24202152 - Exonic hg19 STAD TCGA-VQ-A922-01A 25 2 CDS-5'UTR Intra-chr p36.11 Seq+ 51012 ChimerSeq STARFusion TCGA_RNA-Seq C16orf72-ABAT C16orf72 chr16 9197116 + ABAT chr16 8851614 + Exonic hg19 STAD TCGA-VQ-A922-01A 24 2 In-Frame Intra-chr p13.2 p13.2 Seq+ 51013 ChimerSeq STARFusion TCGA_RNA-Seq PPP3CC-XPO7 PPP3CC chr8 22298971 + XPO7 chr8 21851874 + Exonic hg19 STAD TCGA-VQ-A922-01A 22 2 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.3 Seq+ 51014 ChimerSeq STARFusion TCGA_RNA-Seq DSG1-TNXB DSG1 chr18 28919988 + TNXB chr6 32038191 - Exonic hg19 STAD TCGA-VQ-A922-01A 19 2 In-Frame Inter-chr q12.1 Seq+ 51015 ChimerSeq STARFusion TCGA_RNA-Seq RNF19A-ANKRD46 RNF19A chr8 101276899 - ANKRD46 chr8 101545539 - Exonic hg19 STAD TCGA-VQ-A922-01A 18 4 CDS-5'UTR Intra-chr q22.2 q22.3 Seq+ 51016 ChimerSeq STARFusion TCGA_RNA-Seq CTNNBL1-ETFA CTNNBL1 chr20 36431450 + ETFA chr15 76508938 - Exonic hg19 STAD TCGA-VQ-A922-01A 17 0 Out-of-frame Inter-chr q11.23 q24.3 Seq+ 51017 ChimerSeq STARFusion TCGA_RNA-Seq ZFYVE9-BTF3L4 ZFYVE9 chr1 52705267 + BTF3L4 chr1 52549012 + Exonic hg19 STAD TCGA-VQ-A922-01A 15 3 In-Frame Intra-chr p32.3 p32.3 Seq+ 51018 ChimerSeq STARFusion TCGA_RNA-Seq CAPZB-TMCO4 CAPZB chr1 19711999 - TMCO4 chr1 20027378 - Exonic hg19 STAD TCGA-VQ-A922-01A 15 1 Out-of-frame Intra-chr p36.13 p36.13 Seq+ 51019 ChimerSeq STARFusion TCGA_RNA-Seq DGKA-DSG1 DGKA chr12 56334217 + DSG1 chr18 28908152 + Exonic hg19 STAD TCGA-VQ-A922-01A 14 5 In-Frame Inter-chr q13.2 q12.1 Seq+ 51020 ChimerSeq STARFusion TCGA_RNA-Seq LYRM5-LRMP LYRM5 chr12 25348271 + LRMP chr12 25259877 + Exonic hg19 STAD TCGA-VQ-A922-01A 15 0 5'UTR-CDS Intra-chr p12.1 Tumor suppressor gene Seq+ 51021 ChimerSeq STARFusion TCGA_RNA-Seq ABI2-SPATS2L ABI2 chr2 204231767 + SPATS2L chr2 201253946 + Exonic hg19 STAD TCGA-VQ-A922-01A 14 3 CDS-5'UTR Intra-chr q33.2 Tumor suppressor gene q33.1 Seq+ 51022 ChimerSeq STARFusion TCGA_RNA-Seq ARPC5L-OLFML2A ARPC5L chr9 127626386 + OLFML2A chr9 127549254 + Exonic hg19 STAD TCGA-VQ-A922-01A 14 2 5'UTR-CDS Intra-chr q33.3 q33.3 51023 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K5-IFNGR1 MAP3K5 chr6 137112848 - IFNGR1 chr6 137528214 - Exonic hg19 STAD TCGA-VQ-A922-01A 14 1 In-Frame Intra-chr q23.3 STE:STE11 q23.3 Seq+ 51024 ChimerSeq STARFusion TCGA_RNA-Seq ABTB2-EHF ABTB2 chr11 34378248 - EHF chr11 34664175 + Exonic hg19 STAD TCGA-VQ-A922-01A 13 2 Out-of-frame Intra-chr p13 p13 Tumor suppressor gene Transcription factor Seq+ 51025 ChimerSeq STARFusion TCGA_RNA-Seq UGDH-PDS5A UGDH chr4 39528903 - PDS5A chr4 39910160 - Exonic hg19 STAD TCGA-VQ-A922-01A 13 2 5'UTR-CDS Intra-chr p14 p14 Seq+ 51026 ChimerSeq STARFusion TCGA_RNA-Seq ATG5-SCML4 ATG5 chr6 106727536 - SCML4 chr6 108093590 - Exonic hg19 STAD TCGA-VQ-A922-01A 12 3 CDS-5'UTR Intra-chr q21 q21 Transcription factor Seq+ 51027 ChimerSeq STARFusion TCGA_RNA-Seq MINK1-SPNS2 MINK1 chr17 4736935 + SPNS2 chr17 4416542 + Exonic hg19 STAD TCGA-VQ-A922-01A 12 2 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 51028 ChimerSeq STARFusion TCGA_RNA-Seq DIS3-KLF12 DIS3 chr13 73345933 - KLF12 chr13 74420510 - Exonic hg19 STAD TCGA-VQ-A922-01A 12 1 In-Frame Intra-chr q21.33 q22.1 Transcription factor Seq+ 51029 ChimerSeq STARFusion TCGA_RNA-Seq FANCD2-WDR93 FANCD2 chr3 10107663 + WDR93 chr15 90260142 + Exonic hg19 STAD TCGA-VQ-A922-01A 11 2 In-Frame Inter-chr p25.3 Oncogene q26.1 Seq+ 51030 ChimerSeq STARFusion TCGA_RNA-Seq PPP3CC-XPO7 PPP3CC chr8 22298971 + XPO7 chr8 21856266 + Exonic hg19 STAD TCGA-VQ-A922-01A 11 2 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.3 Seq+ 51031 ChimerSeq STARFusion TCGA_RNA-Seq DDR1-TUBB DDR1 chr6 30850760 + TUBB chr6 30691150 + Exonic hg19 STAD TCGA-VQ-A922-01A 11 1 Out-of-frame Intra-chr TK:DDR Seq+ 51032 ChimerSeq STARFusion TCGA_RNA-Seq REPS2-TXLNG REPS2 chrX 17121902 + TXLNG chrX 16847699 + Exonic hg19 STAD TCGA-VQ-A922-01A 11 1 In-Frame Intra-chr p22.2 p22.2 Seq+ 51033 ChimerSeq STARFusion TCGA_RNA-Seq MPHOSPH9-PTPRR MPHOSPH9 chr12 123705919 - PTPRR chr12 71095103 - Exonic hg19 STAD TCGA-VQ-A922-01A 10 2 In-Frame Intra-chr q24.31 q15 Seq+ 51034 ChimerSeq STARFusion TCGA_RNA-Seq CDC5L-POLH CDC5L chr6 44376369 + POLH chr6 43568725 + Exonic hg19 STAD TCGA-VQ-A922-01A 10 1 5'UTR-CDS Intra-chr p21.1 Transcription factor p21.1 Seq+ 51035 ChimerSeq STARFusion TCGA_RNA-Seq RNF19A-ANKRD46 RNF19A chr8 101276899 - ANKRD46 chr8 101563797 - Exonic hg19 STAD TCGA-VQ-A922-01A 9 4 CDS-5'UTR Intra-chr q22.2 q22.3 Seq+ 51036 ChimerSeq STARFusion TCGA_RNA-Seq TGIF2-ERGIC3 TGIF2 chr20 35207369 + ERGIC3 chr20 34136262 + Exonic hg19 STAD TCGA-VQ-A922-01A 10 0 Out-of-frame Intra-chr q11.23 Transcription factor q11.22 51037 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K2-WDR33 MAP3K2 chr2 128145028 - WDR33 chr2 128528578 - Exonic hg19 STAD TCGA-VQ-A922-01A 9 2 5'UTR-5'UTR Intra-chr q14.3 STE:STE11 q14.3 51038 ChimerSeq STARFusion TCGA_RNA-Seq RNF19A-GAPDHP62 RNF19A chr8 101276899 - GAPDHP62 chr8 101563797 - Exonic hg19 STAD TCGA-VQ-A922-01A 9 2 Out-of-frame Intra-chr q22.2 q22.3 51039 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF10L-GPR137B ARHGEF10L chr1 17991090 + GPR137B chr1 236368426 + Exonic hg19 STAD TCGA-VQ-A922-01A 9 1 In-Frame Intra-chr p36.13 q42.3 51040 ChimerSeq STARFusion TCGA_RNA-Seq WSB2-VSIG10 WSB2 chr12 118490115 - VSIG10 chr12 118564475 - Exonic hg19 STAD TCGA-VQ-A922-01A 9 1 CDS-5'UTR Intra-chr q24.23 q24.23 Seq+ 51041 ChimerSeq STARFusion TCGA_RNA-Seq ACTN1-DCAF5 ACTN1 chr14 69369194 - DCAF5 chr14 69542128 - Exonic hg19 STAD TCGA-VQ-A922-01A 8 4 In-Frame Intra-chr q24.1 q24.1 Seq+ 51042 ChimerSeq STARFusion TCGA_RNA-Seq RNF19A-ANKRD46 RNF19A chr8 101281013 - ANKRD46 chr8 101545539 - Exonic hg19 STAD TCGA-VQ-A922-01A 8 4 CDS-5'UTR Intra-chr q22.2 q22.3 Seq+ 51043 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K2-POLR2D MAP3K2 chr2 128145028 - POLR2D chr2 128610679 - Exonic hg19 STAD TCGA-VQ-A922-01A 8 3 5'UTR-CDS Intra-chr q14.3 STE:STE11 q14.3 51044 ChimerSeq STARFusion TCGA_RNA-Seq PPARGC1B-ABLIM3 PPARGC1B chr5 149109983 + ABLIM3 chr5 148596522 + Exonic hg19 STAD TCGA-VQ-A922-01A 7 4 In-Frame Intra-chr q32 q32 51045 ChimerSeq STARFusion TCGA_RNA-Seq RRBP1-PCSK2 RRBP1 chr20 17596571 - PCSK2 chr20 17462229 + Exonic hg19 STAD TCGA-VQ-A922-01A 7 4 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 51046 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-QRSL1 PVT1 chr8 128806980 + QRSL1 chr6 107110855 + Exonic hg19 STAD TCGA-CD-8528-01A 6354 14578 5'UTR-CDS Inter-chr q24.21 q21 Seq+ 51047 ChimerSeq STARFusion TCGA_RNA-Seq QRSL1-CD24P4 QRSL1 chr6 107077580 + CD24P4 chrY 21154526 - Exonic hg19 STAD TCGA-CD-8528-01A 6301 3714 Out-of-frame Inter-chr q21 q11.222 51048 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-QRSL1 PVT1 chr8 128808254 + QRSL1 chr6 107110855 + Exonic hg19 STAD TCGA-CD-8528-01A 3110 14462 5'UTR-CDS Inter-chr q24.21 q21 Seq+ 51049 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-QRSL1 PVT1 chr8 128829130 + QRSL1 chr6 107110855 + Exonic hg19 STAD TCGA-CD-8528-01A 2619 14462 5'UTR-CDS Inter-chr q24.21 q21 Seq+ 51050 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-QRSL1 PVT1 chr8 128808317 + QRSL1 chr6 107110855 + Exonic hg19 STAD TCGA-CD-8528-01A 2526 14462 5'UTR-CDS Inter-chr q24.21 q21 Seq+ 51051 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-QRSL1 PVT1 chr8 128806980 + QRSL1 chr6 107110941 + Exonic hg19 STAD TCGA-CD-8528-01A 728 14462 5'UTR-CDS Inter-chr q24.21 q21 Seq+ 51052 ChimerSeq STARFusion TCGA_RNA-Seq UBE2Q2P3-WDR72 UBE2Q2P3 chr15 83024079 + WDR72 chr15 54025358 - Exonic hg19 STAD TCGA-CD-8528-01A 704 226 5'UTR-5'UTR Intra-chr q21.3 51053 ChimerSeq STARFusion TCGA_RNA-Seq ATG5-CASC8 ATG5 chr6 106649847 - CASC8 chr8 128335399 - Exonic hg19 STAD TCGA-CD-8528-01A 148 96 Out-of-frame Inter-chr q21 q24.21 Seq+ 51054 ChimerSeq STARFusion TCGA_RNA-Seq CAST-OCLN CAST chr5 96064913 + OCLN chr5 68830521 + Exonic hg19 STAD TCGA-CD-8528-01A 136 48 In-Frame Intra-chr q15 q13.2 Seq+ 51055 ChimerSeq STARFusion TCGA_RNA-Seq OCLN-ARHGAP26 OCLN chr5 68809936 + ARHGAP26 chr5 142393645 + Exonic hg19 STAD TCGA-CD-8528-01A 74 28 In-Frame Intra-chr q13.2 q31.3 Seq+ 51056 ChimerSeq STARFusion TCGA_RNA-Seq ATG5-PVT1 ATG5 chr6 106649847 - PVT1 chr8 128902835 + Exonic hg19 STAD TCGA-CD-8528-01A 44 23 CDS-5'UTR Inter-chr q21 q24.21 Seq+ 51057 ChimerSeq STARFusion TCGA_RNA-Seq AIM1-RN7SL2 AIM1 chr6 107017196 + RN7SL2 chr14 50329517 - Exonic hg19 STAD TCGA-CD-8528-01A 18 25 Out-of-frame Inter-chr q21.3 51058 ChimerSeq STARFusion TCGA_RNA-Seq SLTM-EPB42 SLTM chr15 59224555 - EPB42 chr15 43423340 - Exonic hg19 STAD TCGA-CD-8528-01A 19 20 CDS-3'UTR Intra-chr q22.1 q15.2 Seq+ 51059 ChimerSeq STARFusion TCGA_RNA-Seq QRSL1-PVT1 QRSL1 chr6 107110935 + PVT1 chr8 128806787 + Exonic hg19 STAD TCGA-CD-8528-01A 8 41 Out-of-frame Inter-chr q21 q24.21 51060 ChimerSeq STARFusion TCGA_RNA-Seq EFTUD1-GLDN EFTUD1 chr15 82422718 - GLDN chr15 51687032 + Exonic hg19 STAD TCGA-CD-8528-01A 16 6 Out-of-frame Intra-chr q21.2 51061 ChimerSeq STARFusion TCGA_RNA-Seq QRSL1-PVT1 QRSL1 chr6 107110988 + PVT1 chr8 128806787 + Exonic hg19 STAD TCGA-CD-8528-01A 6 41 Out-of-frame Inter-chr q21 q24.21 51062 ChimerSeq STARFusion TCGA_RNA-Seq QRSL1-PVT1 QRSL1 chr6 107110894 + PVT1 chr8 128806800 + Exonic hg19 STAD TCGA-CD-8528-01A 4 41 Out-of-frame Inter-chr q21 q24.21 51063 ChimerSeq STARFusion TCGA_RNA-Seq QRSL1-PVT1 QRSL1 chr6 107110882 + PVT1 chr8 128806788 + Exonic hg19 STAD TCGA-CD-8528-01A 3 41 Out-of-frame Inter-chr q21 q24.21 51064 ChimerSeq STARFusion TCGA_RNA-Seq IGF1R-EFTUD1 IGF1R chr15 99251336 + EFTUD1 chr15 82456325 - Exonic hg19 STAD TCGA-CD-8528-01A 5 7 In-Frame Intra-chr q26.3 TK:InsR Oncogene 51065 ChimerSeq STARFusion TCGA_RNA-Seq CHD8-HNRNPC CHD8 chr14 21924191 - HNRNPC chr14 21702388 - Exonic hg19 STAD TCGA-HU-A4G3-01A 79 11 5'UTR-5'UTR Intra-chr q11.2 q11.2 Seq+ 51066 ChimerSeq STARFusion TCGA_RNA-Seq LLGL2-ITGB4 LLGL2 chr17 73529786 + ITGB4 chr17 73748255 + Exonic hg19 STAD TCGA-HU-A4G3-01A 51 9 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 51067 ChimerSeq STARFusion TCGA_RNA-Seq PIK3C2B-PLEKHA6 PIK3C2B chr1 204463484 - PLEKHA6 chr1 204243937 - Exonic hg19 STAD TCGA-HU-A4G3-01A 18 2 5'UTR-5'UTR Intra-chr q32.1 Oncogene q32.1 51068 ChimerSeq STARFusion TCGA_RNA-Seq PLEC-PUF60 PLEC chr8 145047571 - PUF60 chr8 144900704 - Exonic hg19 STAD TCGA-HU-A4G3-01A 16 5 Out-of-frame Intra-chr q24.3 51069 ChimerSeq STARFusion TCGA_RNA-Seq CCDC57-FASN CCDC57 chr17 80159414 - FASN chr17 80054328 - Exonic hg19 STAD TCGA-HU-A4G3-01A 16 2 CDS-5'UTR Intra-chr q25.3 q25.3 Seq+ 51070 ChimerSeq STARFusion TCGA_RNA-Seq PLEC-PUF60 PLEC chr8 145049345 - PUF60 chr8 144900704 - Exonic hg19 STAD TCGA-HU-A4G3-01A 15 5 Out-of-frame Intra-chr q24.3 51071 ChimerSeq STARFusion TCGA_RNA-Seq PIP5K1B-TJP2 PIP5K1B chr9 71357573 + TJP2 chr9 71827464 + Exonic hg19 STAD TCGA-HU-A4G3-01A 14 4 5'UTR-5'UTR Intra-chr q21.11 q21.11 Seq+ 51072 ChimerSeq STARFusion TCGA_RNA-Seq PIP5K1B-TJP2 PIP5K1B chr9 71320678 + TJP2 chr9 71827464 + Exonic hg19 STAD TCGA-HU-A4G3-01A 13 4 5'UTR-5'UTR Intra-chr q21.11 q21.11 Seq+ 51073 ChimerSeq STARFusion TCGA_RNA-Seq PACS2-MTA1 PACS2 chr14 105781374 + MTA1 chr14 105905009 + Exonic hg19 STAD TCGA-HU-A4G3-01A 11 3 Out-of-frame Intra-chr q32.33 q32.33 Seq+ 51074 ChimerSeq STARFusion TCGA_RNA-Seq PACS2-TEX22 PACS2 chr14 105781374 + TEX22 chr14 105905009 + Exonic hg19 STAD TCGA-HU-A4G3-01A 11 3 CDS-3'UTR Intra-chr q32.33 q32.33 51075 ChimerSeq STARFusion TCGA_RNA-Seq LLGL2-ITGB4 LLGL2 chr17 73521906 + ITGB4 chr17 73748255 + Exonic hg19 STAD TCGA-HU-A4G3-01A 8 9 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 51076 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 + VMP1 chr17 57886157 + Exonic hg19 STAD TCGA-IP-7968-01A 270 114 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 51077 ChimerSeq STARFusion TCGA_RNA-Seq STK38L-CCDC91 STK38L chr12 27462130 + CCDC91 chr12 28603094 + Exonic hg19 STAD TCGA-IP-7968-01A 176 85 In-Frame Intra-chr p11.23 p11.22 Seq+ 51078 ChimerSeq STARFusion TCGA_RNA-Seq FAM60A-TM7SF3 FAM60A chr12 31478958 - TM7SF3 chr12 27156323 - Exonic hg19 STAD TCGA-IP-7968-01A 58 150 5'UTR-CDS Intra-chr p11.23 Seq+ 51079 ChimerSeq STARFusion TCGA_RNA-Seq FAM60A-TM7SF3 FAM60A chr12 31478958 - TM7SF3 chr12 27152609 - Exonic hg19 STAD TCGA-IP-7968-01A 18 147 5'UTR-CDS Intra-chr p11.23 Seq+ 51080 ChimerSeq STARFusion TCGA_RNA-Seq FAM60A-TM7SF3 FAM60A chr12 31476878 - TM7SF3 chr12 27156323 - Exonic hg19 STAD TCGA-IP-7968-01A 11 147 5'UTR-CDS Intra-chr p11.23 Seq+ 51081 ChimerSeq STARFusion TCGA_RNA-Seq MRPS35-LYRM5 MRPS35 chr12 27869391 + LYRM5 chr12 25356854 + Exonic hg19 STAD TCGA-IP-7968-01A 41 26 CDS-5'UTR Intra-chr p11.22 Seq+ 51082 ChimerSeq STARFusion TCGA_RNA-Seq FAM60A-TM7SF3 FAM60A chr12 31440568 - TM7SF3 chr12 27148341 - Exonic hg19 STAD TCGA-IP-7968-01A 10 147 In-Frame Intra-chr p11.23 Seq+ 51083 ChimerSeq STARFusion TCGA_RNA-Seq RAD51B-GPHN RAD51B chr14 68353921 + GPHN chr14 67626132 + Exonic hg19 STAD TCGA-IP-7968-01A 41 22 In-Frame Intra-chr q24.1 q23.3 Seq+ 51084 ChimerSeq STARFusion TCGA_RNA-Seq POLRMT-PALM POLRMT chr19 619958 - PALM chr19 736019 + Exonic hg19 STAD TCGA-IP-7968-01A 33 18 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 51085 ChimerSeq STARFusion TCGA_RNA-Seq PALM-OR4G11P PALM chr19 748016 + OR4G11P chr1 63133 + Exonic hg19 STAD TCGA-IP-7968-01A 30 17 Out-of-frame Inter-chr p13.3 p36.33 51086 ChimerSeq STARFusion TCGA_RNA-Seq MRPS35-LYRM5 MRPS35 chr12 27869391 + LYRM5 chr12 25357025 + Exonic hg19 STAD TCGA-IP-7968-01A 19 26 In-Frame Intra-chr p11.22 Seq+ 51087 ChimerSeq STARFusion TCGA_RNA-Seq C2CD5-IAPP C2CD5 chr12 22659645 - IAPP chr12 21526271 + Exonic hg19 STAD TCGA-IP-7968-01A 13 13 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 51088 ChimerSeq STARFusion TCGA_RNA-Seq MRPS35-PPFIBP1 MRPS35 chr12 27863888 + PPFIBP1 chr12 27731085 + Exonic hg19 STAD TCGA-IP-7968-01A 9 4 CDS-5'UTR Intra-chr p11.22 p11.23 Seq+ 51089 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB2-AKAP12 ZBTB2 chr6 151694600 - AKAP12 chr6 151669846 + Exonic hg19 STAD TCGA-HU-A4H8-01A 101 26 Out-of-frame Intra-chr q25.1 Transcription factor q25.1 Tumor suppressor gene Seq+ 51090 ChimerSeq STARFusion TCGA_RNA-Seq NLRP1-DERL2 NLRP1 chr17 5522651 - DERL2 chr17 5386202 - Exonic hg19 STAD TCGA-HU-A4H8-01A 7 36 5'UTR-CDS Intra-chr p13.2 Oncogene p13.2 51091 ChimerSeq STARFusion TCGA_RNA-Seq NLRP1-DERL2 NLRP1 chr17 5522651 - DERL2 chr17 5383464 - Exonic hg19 STAD TCGA-HU-A4H8-01A 6 36 5'UTR-CDS Intra-chr p13.2 Oncogene p13.2 51092 ChimerSeq STARFusion TCGA_RNA-Seq HCFC1-IGHG1 HCFC1 chrX 153222118 - IGHG1 chr14 106209407 - Exonic hg19 STAD TCGA-BR-6563-01A 21 0 Out-of-frame Inter-chr q28 q32.33 51093 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-ACLY TPX2 chr20 30330450 + ACLY chr17 40070153 - Exonic hg19 STAD TCGA-BR-8077-01A 36 13 5'UTR-5'UTR Inter-chr q11.21 q21.2 Seq+ 51094 ChimerSeq STARFusion TCGA_RNA-Seq TFB2M-SMYD3 TFB2M chr1 246727648 - SMYD3 chr1 246093239 - Exonic hg19 STAD TCGA-BR-8077-01A 32 15 In-Frame Intra-chr q44 q44 Transcription factor Seq+ 51095 ChimerSeq STARFusion TCGA_RNA-Seq DENND4A-HBD DENND4A chr15 66084348 - HBD chr11 5255443 - Exonic hg19 STAD TCGA-BR-8077-01A 21 4 5'UTR-CDS Inter-chr q22.31 p15.4 Seq+ 51096 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-ACLY TPX2 chr20 30330450 + ACLY chr17 40070149 - Exonic hg19 STAD TCGA-BR-8077-01A 16 13 5'UTR-5'UTR Inter-chr q11.21 q21.2 Seq+ 51097 ChimerSeq STARFusion TCGA_RNA-Seq NUPL2-DFNA5 NUPL2 chr7 23221825 + DFNA5 chr7 24758837 - Exonic hg19 STAD TCGA-BR-8077-01A 13 10 Out-of-frame Intra-chr p15.3 p15.3 Tumor suppressor gene Seq+ 51098 ChimerSeq STARFusion TCGA_RNA-Seq YAF2-ZCRB1 YAF2 chr12 42604157 - ZCRB1 chr12 42707788 - Exonic hg19 STAD TCGA-BR-8077-01A 9 8 3'UTR-CDS Intra-chr q12 q12 Seq+ 51099 ChimerSeq STARFusion TCGA_RNA-Seq RALGAPA2-MIR3150B RALGAPA2 chr20 20634174 - MIR3150B chr8 96081463 - Exonic hg19 STAD TCGA-BR-8077-01A 8 2 CDS-3'UTR Inter-chr p11.23 q22.1 51100 ChimerSeq STARFusion TCGA_RNA-Seq XKR9-LACTB2 XKR9 chr8 71581773 + LACTB2 chr8 71556478 - Exonic hg19 STAD TCGA-BR-8077-01A 4 0 5'UTR-CDS Intra-chr q13.3 q13.3 Seq+ 51101 ChimerSeq STARFusion TCGA_RNA-Seq YAF2-ZCRB1 YAF2 chr12 42631401 - ZCRB1 chr12 42707788 - Exonic hg19 STAD TCGA-BR-8077-01A 2 8 Out-of-frame Intra-chr q12 q12 Seq+ 51102 ChimerSeq STARFusion TCGA_RNA-Seq COL1A1-EVI2B COL1A1 chr17 48262644 - EVI2B chr17 29632386 - Exonic hg19 STAD TCGA-BR-8077-01A 3 0 Out-of-frame Intra-chr q21.33 Oncogene q11.2 51103 ChimerSeq STARFusion TCGA_RNA-Seq FAM217B-TNRC18 FAM217B chr20 58519840 + TNRC18 chr7 5396609 - Exonic hg19 STAD TCGA-BR-8077-01A 3 0 Out-of-frame Inter-chr q13.33 p22.1 51104 ChimerSeq STARFusion TCGA_RNA-Seq LINC00299-NFE2L2 LINC00299 chr2 8427468 - NFE2L2 chr2 178098999 - Exonic hg19 STAD TCGA-BR-8077-01A 3 0 3'UTR-CDS Intra-chr p25.1 q31.2 Oncogene Transcription factor 51105 ChimerSeq STARFusion TCGA_RNA-Seq MACROD2-ESF1 MACROD2 chr20 14066374 + ESF1 chr20 13714489 - Exonic hg19 STAD TCGA-BR-8077-01A 3 0 In-Frame Intra-chr p12.1 p12.1 51106 ChimerSeq STARFusion TCGA_RNA-Seq NDUFA2-DOK6 NDUFA2 chr5 140025072 - DOK6 chr18 67509371 + Exonic hg19 STAD TCGA-BR-8077-01A 3 0 Out-of-frame Inter-chr q31.3 q22.2 51107 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF5-STK4 RAPGEF5 chr7 22347958 - STK4 chr20 43607084 + Exonic hg19 STAD TCGA-BR-8077-01A 3 0 In-Frame Inter-chr p15.3 q13.12 51108 ChimerSeq STARFusion TCGA_RNA-Seq ENC1-CCSER2 ENC1 chr5 73936132 - CCSER2 chr10 86223689 + Exonic hg19 STAD TCGA-BR-8077-01A 2 1 Out-of-frame Inter-chr q13.3 q23.1 51109 ChimerSeq STARFusion TCGA_RNA-Seq MRPL33-GPN1 MRPL33 chr2 27997397 + GPN1 chr2 27870703 + Exonic hg19 STAD TCGA-BR-8077-01A 2 1 In-Frame Intra-chr p23.2 p23.3 51110 ChimerSeq STARFusion TCGA_RNA-Seq UQCC2-MLN UQCC2 chr6 33665400 - MLN chr6 33766998 - Exonic hg19 STAD TCGA-BR-8077-01A 2 1 Out-of-frame Intra-chr p21.31 p21.31 51111 ChimerSeq STARFusion TCGA_RNA-Seq AMBRA1-HARBI1 AMBRA1 chr11 46615378 - HARBI1 chr11 46625459 - Exonic hg19 STAD TCGA-BR-8077-01A 2 0 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 51112 ChimerSeq STARFusion TCGA_RNA-Seq BCL2-MCPH1 BCL2 chr18 60985315 - MCPH1 chr8 6478975 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 In-Frame Inter-chr q21.33 Oncogene p23.1 Tumor suppressor gene 51113 ChimerSeq STARFusion TCGA_RNA-Seq BTRC-TRIP10 BTRC chr10 103113985 + TRIP10 chr19 6750523 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 Out-of-frame Inter-chr q24.32 p13.3 51114 ChimerSeq STARFusion TCGA_RNA-Seq CDC42BPB-DBNDD2 CDC42BPB chr14 103523336 - DBNDD2 chr20 44037100 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 CDS-5'UTR Inter-chr q32.32 q13.12 51115 ChimerSeq STARFusion TCGA_RNA-Seq CDH17-ESRP1 CDH17 chr8 95220711 - ESRP1 chr8 95718153 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 5'UTR-CDS Intra-chr q22.1 Tumor suppressor gene q22.1 Tumor suppressor gene 51116 ChimerSeq STARFusion TCGA_RNA-Seq CDS2-PAN3 CDS2 chr20 5107795 + PAN3 chr13 28830429 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 Out-of-frame Inter-chr p12.3 q12.2 51117 ChimerSeq STARFusion TCGA_RNA-Seq CREB3L2-GREM1 CREB3L2 chr7 137686350 - GREM1 chr15 33022891 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 CDS-5'UTR Inter-chr q33 Transcription factor Tumor suppressor gene 51118 ChimerSeq STARFusion TCGA_RNA-Seq CUX1-CHD2 CUX1 chr7 101758553 + CHD2 chr15 93435234 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 CDS-5'UTR Inter-chr q22.1 Tumor suppressor gene Transcription factor q26.1 51119 ChimerSeq STARFusion TCGA_RNA-Seq DIDO1-ADD1 DIDO1 chr20 61569148 - ADD1 chr4 2877623 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 5'UTR-5'UTR Inter-chr q13.33 Tumor suppressor gene p16.3 51120 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC15-MYL12B DNAJC15 chr13 43597870 + MYL12B chr18 3272882 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 CDS-5'UTR Inter-chr q14.11 p11.31 51121 ChimerSeq STARFusion TCGA_RNA-Seq ENC1-CA5B ENC1 chr5 73936132 - CA5B chrX 15782701 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 5'UTR-CDS Inter-chr q13.3 p22.2 51122 ChimerSeq STARFusion TCGA_RNA-Seq ERC1-LINC00674 ERC1 chr12 1481143 + LINC00674 chr17 66110563 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 Out-of-frame Inter-chr q24.2 51123 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-RP2 ETV6 chr12 11905513 + RP2 chrX 46736940 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor p11.3 51124 ChimerSeq STARFusion TCGA_RNA-Seq FRYL-SLAIN2 FRYL chr4 48686690 - SLAIN2 chr4 48371866 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 5'UTR-CDS Intra-chr p11 p11 Seq+ 51125 ChimerSeq STARFusion TCGA_RNA-Seq GBGT1-GRK5 GBGT1 chr9 136036854 - GRK5 chr10 121189887 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 In-Frame Inter-chr q34.2 q26.11 51126 ChimerSeq STARFusion TCGA_RNA-Seq GNB5-PHF21A GNB5 chr15 52471965 - PHF21A chr11 46113774 - Exonic hg19 STAD TCGA-BR-8077-01A 2 0 CDS-5'UTR Inter-chr q21.2 p11.2 Transcription factor 51127 ChimerSeq STARFusion TCGA_RNA-Seq GPHN-PHF14 GPHN chr14 67147903 + PHF14 chr7 11209043 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 CDS-5'UTR Inter-chr q23.3 p21.3 51128 ChimerSeq STARFusion TCGA_RNA-Seq HIVEP1-HOXC5 HIVEP1 chr6 12089470 + HOXC5 chr12 54428062 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 In-Frame Inter-chr p24.1 Tumor suppressor gene Transcription factor q13.13 Transcription factor 51129 ChimerSeq STARFusion TCGA_RNA-Seq IKBKAP-C11orf48 IKBKAP chr9 111696144 - C11orf48 chr11 62432445 - Exonic hg19 STAD TCGA-BR-8077-01A 2 0 5'UTR-CDS Inter-chr q31.3 51130 ChimerSeq STARFusion TCGA_RNA-Seq KBTBD2-GNAS KBTBD2 chr7 32933447 - GNAS chr20 57470667 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 5'UTR-5'UTR Inter-chr p14.3 q13.32 Oncogene 51131 ChimerSeq STARFusion TCGA_RNA-Seq KBTBD2-RP9P KBTBD2 chr7 32931148 - RP9P chr7 32969720 - Exonic hg19 STAD TCGA-BR-8077-01A 2 0 5'UTR-3'UTR Intra-chr p14.3 p14.3 51132 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0232-SSBP3 KIAA0232 chr4 6784568 + SSBP3 chr1 54870603 - Exonic hg19 STAD TCGA-BR-8077-01A 2 0 5'UTR-CDS Inter-chr p16.1 p32.3 51133 ChimerSeq STARFusion TCGA_RNA-Seq MBP-ZNF236 MBP chr18 74844536 - ZNF236 chr18 74561482 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 5'UTR-CDS Intra-chr q23 q23 Transcription factor 51134 ChimerSeq STARFusion TCGA_RNA-Seq PAH-SPIDR PAH chr12 103288513 - SPIDR chr8 48626051 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 Out-of-frame Inter-chr q23.2 q11.21 51135 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM2-SAFB2 R3HDM2 chr12 57789532 - SAFB2 chr19 5587410 - Exonic hg19 STAD TCGA-BR-8077-01A 2 0 5'UTR-CDS Inter-chr q13.3 p13.3 Tumor suppressor gene Transcription factor 51136 ChimerSeq STARFusion TCGA_RNA-Seq RAB27A-ARHGEF7 RAB27A chr15 55562363 - ARHGEF7 chr13 111953095 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 5'UTR-CDS Inter-chr q21.3 q34 51137 ChimerSeq STARFusion TCGA_RNA-Seq RALGAPA2-TP53INP1 RALGAPA2 chr20 20634174 - TP53INP1 chr8 95953319 - Exonic hg19 STAD TCGA-BR-8077-01A 2 0 CDS-5'UTR Inter-chr p11.23 q22.1 Tumor suppressor gene 51138 ChimerSeq STARFusion TCGA_RNA-Seq RALGDS-GRK5 RALGDS chr9 136036854 - GRK5 chr10 121189887 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 5'UTR-CDS Inter-chr q34.2 Oncogene q26.11 51139 ChimerSeq STARFusion TCGA_RNA-Seq RBM10-ZNF148 RBM10 chrX 47006897 + ZNF148 chr3 124951498 - Exonic hg19 STAD TCGA-BR-8077-01A 2 0 Out-of-frame Inter-chr p11.3 q21.2 Transcription factor 51140 ChimerSeq STARFusion TCGA_RNA-Seq RNF114-SRSF11 RNF114 chr20 48553089 + SRSF11 chr1 70687298 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 CDS-5'UTR Inter-chr q13.13 p31.1 51141 ChimerSeq STARFusion TCGA_RNA-Seq RPL8-FAF1 RPL8 chr8 146017377 - FAF1 chr1 51061888 - Exonic hg19 STAD TCGA-BR-8077-01A 2 0 In-Frame Inter-chr q24.3 p32.3 51142 ChimerSeq STARFusion TCGA_RNA-Seq RPS18-HM13 RPS18 chr6 33243660 + HM13 chr20 30102262 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 CDS-5'UTR Inter-chr q11.21 51143 ChimerSeq STARFusion TCGA_RNA-Seq SBF2-IPO7 SBF2 chr11 10215449 - IPO7 chr11 9424837 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 In-Frame Intra-chr p15.4 p15.4 51144 ChimerSeq STARFusion TCGA_RNA-Seq SLX4IP-STX8 SLX4IP chr20 10416101 + STX8 chr17 9395238 - Exonic hg19 STAD TCGA-BR-8077-01A 2 0 Out-of-frame Inter-chr p12.2 p13.1 51145 ChimerSeq STARFusion TCGA_RNA-Seq SNHG18-SEMA5A SNHG18 chr5 9549261 + SEMA5A chr5 9437964 - Exonic hg19 STAD TCGA-BR-8077-01A 2 0 Out-of-frame Intra-chr p15.31 p15.31 51146 ChimerSeq STARFusion TCGA_RNA-Seq SPINT1-GPX2 SPINT1 chr15 41137227 + GPX2 chr14 65406556 - Exonic hg19 STAD TCGA-BR-8077-01A 2 0 Out-of-frame Inter-chr q15.1 q23.3 51147 ChimerSeq STARFusion TCGA_RNA-Seq STAT4-AGFG1 STAT4 chr2 192011339 - AGFG1 chr2 228416675 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 Out-of-frame Intra-chr q32.3 Transcription factor q36.3 51148 ChimerSeq STARFusion TCGA_RNA-Seq TBL1X-TRAPPC9 TBL1X chrX 9469889 + TRAPPC9 chr8 140922544 - Exonic hg19 STAD TCGA-BR-8077-01A 2 0 5'UTR-CDS Inter-chr p22.31 q24.3 51149 ChimerSeq STARFusion TCGA_RNA-Seq TFPI-UBE4B TFPI chr2 188418927 - UBE4B chr1 10204998 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 5'UTR-CDS Inter-chr q32.1 p36.22 Tumor suppressor gene 51150 ChimerSeq STARFusion TCGA_RNA-Seq TMEM184B-CASP10 TMEM184B chr22 38641941 - CASP10 chr2 202093656 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 Out-of-frame Inter-chr q13.1 q33.1 51151 ChimerSeq STARFusion TCGA_RNA-Seq TPCN1-C8orf44 TPCN1 chr12 113718000 + C8orf44 chr8 67591956 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 Out-of-frame Inter-chr q24.13 q13.1 51152 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-PLCB4 TPD52 chr8 81032050 - PLCB4 chr20 9440282 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 5'UTR-CDS Inter-chr q21.13 p12.3 51153 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC13-PIP5K1B ZDHHC13 chr11 19138823 + PIP5K1B chr9 71606056 + Exonic hg19 STAD TCGA-BR-8077-01A 2 0 Out-of-frame Inter-chr p15.1 q21.11 51154 ChimerSeq STARFusion TCGA_RNA-Seq ZNF638-VAV3 ZNF638 chr2 71558995 + VAV3 chr1 108160254 - Exonic hg19 STAD TCGA-BR-8077-01A 2 0 5'UTR-CDS Inter-chr p13.3 p13.3 51155 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-ERGIC2 ANKRD11 chr16 89556653 - ERGIC2 chr12 29524603 - Exonic hg19 STAD TCGA-CD-8524-01A 117 57 5'UTR-5'UTR Inter-chr q24.3 p11.22 Seq+ 51156 ChimerSeq STARFusion TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5460691 - RNF216 chr7 5681007 - Exonic hg19 STAD TCGA-CD-8524-01A 52 28 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 51157 ChimerSeq STARFusion TCGA_RNA-Seq B3GALTL-MRPS35 B3GALTL chr13 31789237 + MRPS35 chr12 27872741 + Exonic hg19 STAD TCGA-CD-8524-01A 30 7 In-Frame Inter-chr p11.22 Seq+ 51158 ChimerSeq STARFusion TCGA_RNA-Seq ARL5A-IL1B ARL5A chr2 152668871 - IL1B chr2 113593821 - Exonic hg19 STAD TCGA-CD-8524-01A 13 16 CDS-5'UTR Intra-chr q23.3 q14.1 Seq+ 51159 ChimerSeq STARFusion TCGA_RNA-Seq RPL13P12-PNMA2 RPL13P12 chr17 17286669 - PNMA2 chr8 26364477 - Exonic hg19 STAD TCGA-CD-8524-01A 17 0 Out-of-frame Inter-chr p21.2 51160 ChimerSeq STARFusion TCGA_RNA-Seq TLK1-XPO7 TLK1 chr2 172016800 - XPO7 chr8 21824368 + Exonic hg19 STAD TCGA-CD-8524-01A 16 4 Out-of-frame Inter-chr q31.1 Other:TLK p21.3 Seq+ 51161 ChimerSeq STARFusion TCGA_RNA-Seq ARL5A-IL1B ARL5A chr2 152668871 - IL1B chr2 113594435 - Exonic hg19 STAD TCGA-CD-8524-01A 12 14 CDS-5'UTR Intra-chr q23.3 q14.1 Seq+ 51162 ChimerSeq STARFusion TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5446781 - RNF216 chr7 5681007 - Exonic hg19 STAD TCGA-CD-8524-01A 6 28 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 51163 ChimerSeq STARFusion TCGA_RNA-Seq ARL5A-IL1B ARL5A chr2 152668871 - IL1B chr2 113591152 - Exonic hg19 STAD TCGA-CD-8524-01A 2 14 In-Frame Intra-chr q23.3 q14.1 Seq+ 51164 ChimerSeq STARFusion TCGA_RNA-Seq ARL5A-IL1B ARL5A chr2 152670683 - IL1B chr2 113593821 - Exonic hg19 STAD TCGA-CD-8524-01A 2 14 CDS-5'UTR Intra-chr q23.3 q14.1 Seq+ 51165 ChimerSeq STARFusion TCGA_RNA-Seq LRBA-PET112 LRBA chr4 151935579 - PET112 chr4 152640690 - Exonic hg19 STAD TCGA-BR-8486-01A 44 24 In-Frame Intra-chr q31.3 Seq+ 51166 ChimerSeq STARFusion TCGA_RNA-Seq CCT3-IGKC CCT3 chr1 156305580 - IGKC chr2 89160117 - Exonic hg19 STAD TCGA-BR-8486-01A 36 1 Out-of-frame Inter-chr q22 p11.2 51167 ChimerSeq STARFusion TCGA_RNA-Seq IGHA1-ZYX IGHA1 chr14 106174693 - ZYX chr7 143088137 + Exonic hg19 STAD TCGA-BR-8486-01A 35 1 Out-of-frame Inter-chr q34 Tumor suppressor gene 51168 ChimerSeq STARFusion TCGA_RNA-Seq CERS6-ABCB11 CERS6 chr2 169487552 + ABCB11 chr2 169801471 - Exonic hg19 STAD TCGA-BR-8486-01A 15 13 In-Frame Intra-chr q24.3 Seq+ 51169 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-PPP1R1B STARD3 chr17 37793484 + PPP1R1B chr17 37791860 + Exonic hg19 STAD TCGA-BR-8486-01A 14 6 5'UTR-CDS Intra-chr q12 q12 Tumor suppressor gene Seq+ 51170 ChimerSeq STARFusion TCGA_RNA-Seq POLR1C-C6orf226 POLR1C chr6 43487576 + C6orf226 chr6 42858299 - Exonic hg19 STAD TCGA-BR-8486-01A 12 5 In-Frame Intra-chr p21.1 p21.1 51171 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL1-PIGR RN7SL1 chr14 50053383 + PIGR chr1 207102860 - Exonic hg19 STAD TCGA-BR-8486-01A 3 28 Out-of-frame Inter-chr q21.3 q32.1 51172 ChimerSeq STARFusion TCGA_RNA-Seq FOXP4-GUCA1A FOXP4 chr6 41545819 + GUCA1A chr6 42141071 + Exonic hg19 STAD TCGA-BR-8486-01A 6 11 CDS-5'UTR Intra-chr p21.1 Oncogene Transcription factor p21.1 51173 ChimerSeq STARFusion TCGA_RNA-Seq GTPBP2-RSPH9 GTPBP2 chr6 43591474 - RSPH9 chr6 43638526 + Exonic hg19 STAD TCGA-BR-8486-01A 5 15 In-Frame Intra-chr p21.1 p21.1 51174 ChimerSeq STARFusion TCGA_RNA-Seq MED1-GRB7 MED1 chr17 37607291 - GRB7 chr17 37898505 + Exonic hg19 STAD TCGA-BR-8486-01A 7 5 In-Frame Intra-chr q12 Tumor suppressor gene q12 Seq+ 51175 ChimerSeq STARFusion TCGA_RNA-Seq GTPBP2-RSPH9 GTPBP2 chr6 43590370 - RSPH9 chr6 43638526 + Exonic hg19 STAD TCGA-BR-8486-01A 2 14 Out-of-frame Intra-chr p21.1 p21.1 51176 ChimerSeq STARFusion TCGA_RNA-Seq KMT2E-ZBTB8A KMT2E chr7 104707254 + ZBTB8A chr1 33058532 + Exonic hg19 STAD TCGA-BR-6456-01A 60 0 Out-of-frame Inter-chr q22.3 p35.1 Transcription factor Seq+ 51177 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-SYNDIG1 KDM2A chr11 66999431 + SYNDIG1 chr20 24565492 + Exonic hg19 STAD TCGA-BR-6456-01A 55 2 In-Frame Inter-chr q13.2 Transcription factor p11.21 Seq+ 51178 ChimerSeq STARFusion TCGA_RNA-Seq TNKS2-FAM107B TNKS2 chr10 93602148 + FAM107B chr10 14709690 - Exonic hg19 STAD TCGA-BR-6456-01A 32 0 Out-of-frame Intra-chr q23.32 p13 Seq+ 51179 ChimerSeq STARFusion TCGA_RNA-Seq MTMR2-CLNS1A MTMR2 chr11 95647406 - CLNS1A chr11 77340944 - Exonic hg19 STAD TCGA-BR-6456-01A 17 1 5'UTR-CDS Intra-chr q21 q14.1 Seq+ 51180 ChimerSeq STARFusion TCGA_RNA-Seq MTMR2-CLNS1A MTMR2 chr11 95657039 - CLNS1A chr11 77340944 - Exonic hg19 STAD TCGA-BR-6456-01A 12 1 In-Frame Intra-chr q21 q14.1 Seq+ 51181 ChimerSeq STARFusion TCGA_RNA-Seq FAM53B-NUAK2 FAM53B chr10 126370176 - NUAK2 chr1 205277860 - Exonic hg19 STAD TCGA-BR-6456-01A 11 1 Out-of-frame Inter-chr q26.13 q32.1 Seq+ 51182 ChimerSeq STARFusion TCGA_RNA-Seq MACF1-FOXJ3 MACF1 chr1 39910507 + FOXJ3 chr1 42664901 - Exonic hg19 STAD TCGA-F1-A72C-01A 64 17 In-Frame Intra-chr p34.3 p34.2 Transcription factor Seq+ 51183 ChimerSeq STARFusion TCGA_RNA-Seq R3HCC1-ENTPD4 R3HCC1 chr8 23146666 + ENTPD4 chr8 23243558 - Exonic hg19 STAD TCGA-BR-A4PE-01A 124 23 5'UTR-3'UTR Intra-chr p21.3 p21.3 Seq+ 51184 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC2-ALDH1A1 DNAJC2 chr7 102985006 - ALDH1A1 chr9 75545935 - Exonic hg19 STAD TCGA-BR-A4PE-01A 71 14 Out-of-frame Inter-chr q22.1 q21.13 Seq+ 51185 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC2-ALDH1A1 DNAJC2 chr7 102985006 - ALDH1A1 chr9 75555168 - Exonic hg19 STAD TCGA-BR-A4PE-01A 57 14 Out-of-frame Inter-chr q22.1 q21.13 Seq+ 51186 ChimerSeq STARFusion TCGA_RNA-Seq SPINT1-SERP1 SPINT1 chr15 41137227 + SERP1 chr3 150284893 - Exonic hg19 STAD TCGA-BR-A4PE-01A 37 5 CDS-5'UTR Inter-chr q15.1 q25.1 Seq+ 51187 ChimerSeq STARFusion TCGA_RNA-Seq SRSF3-PTCHD4 SRSF3 chr6 36566760 + PTCHD4 chr6 47976850 - Exonic hg19 STAD TCGA-BR-A4PE-01A 17 3 Out-of-frame Intra-chr p21.31 p12.3 Seq+ 51188 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-EIF1 ERBB2 chr17 37868701 + EIF1 chr17 39846030 + Exonic hg19 STAD TCGA-BR-A4PE-01A 17 0 Out-of-frame Intra-chr q12 Oncogene q21.2 Seq+ 51189 ChimerSeq STARFusion TCGA_RNA-Seq CCT6A-GBAS CCT6A chr7 56123490 + GBAS chr7 56045819 + Exonic hg19 STAD TCGA-BR-A4PE-01A 16 3 Out-of-frame Intra-chr p11.2 Seq+ 51190 ChimerSeq STARFusion TCGA_RNA-Seq IKZF3-STARD3 IKZF3 chr17 37988351 - STARD3 chr17 37813261 + Exonic hg19 STAD TCGA-BR-A4PE-01A 12 2 Out-of-frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q12 51191 ChimerSeq STARFusion TCGA_RNA-Seq SRSF3-PTCHD4 SRSF3 chr6 36566760 + PTCHD4 chr6 47869671 - Exonic hg19 STAD TCGA-BR-A4PE-01A 10 3 Out-of-frame Intra-chr p21.31 p12.3 Seq+ 51192 ChimerSeq STARFusion TCGA_RNA-Seq TNIK-DPPA2 TNIK chr3 170824972 - DPPA2 chr3 109019282 - Exonic hg19 STAD TCGA-BR-A4PE-01A 10 1 Out-of-frame Intra-chr q26.31 STE:STE20 q13.13 Seq+ 51193 ChimerSeq STARFusion TCGA_RNA-Seq NSUN3-HGD NSUN3 chr3 93813998 + HGD chr3 120371498 - Exonic hg19 STAD TCGA-BR-A4PE-01A 8 1 Out-of-frame Intra-chr q11.2 q13.33 Seq+ 51194 ChimerSeq STARFusion TCGA_RNA-Seq ABCC5-LINGO1 ABCC5 chr3 183660515 - LINGO1 chr15 78027395 - Exonic hg19 STAD TCGA-BR-A4PE-01A 8 0 CDS-5'UTR Inter-chr q27.1 q24.3 51195 ChimerSeq STARFusion TCGA_RNA-Seq MIEN1-GRB7 MIEN1 chr17 37885938 - GRB7 chr17 37898505 + Exonic hg19 STAD TCGA-BR-A4PE-01A 8 0 Out-of-frame Intra-chr q12 q12 Seq+ 51196 ChimerSeq STARFusion TCGA_RNA-Seq ZNF148-RYK ZNF148 chr3 125042153 - RYK chr3 133941383 - Exonic hg19 STAD TCGA-BR-A4PE-01A 7 0 5'UTR-CDS Intra-chr q21.2 Transcription factor q22.2 TK:Ryk 51197 ChimerSeq STARFusion TCGA_RNA-Seq DOPEY1-EFR3A DOPEY1 chr6 83851765 + EFR3A chr8 132980542 + Exonic hg19 STAD TCGA-BR-A4PE-01A 6 3 In-Frame Inter-chr q14.1 q24.22 Seq+ 51198 ChimerSeq STARFusion TCGA_RNA-Seq MBNL1-ABCC5 MBNL1 chr3 152018156 + ABCC5 chr3 183732235 - Exonic hg19 STAD TCGA-BR-A4PE-01A 6 2 CDS-5'UTR Intra-chr q25.1 q27.1 Seq+ 51199 ChimerSeq STARFusion TCGA_RNA-Seq ZNF148-RYK ZNF148 chr3 125042153 - RYK chr3 133948678 - Exonic hg19 STAD TCGA-BR-A4PE-01A 6 0 5'UTR-CDS Intra-chr q21.2 Transcription factor q22.2 TK:Ryk 51200 ChimerSeq STARFusion TCGA_RNA-Seq TMCC1-TNIK TMCC1 chr3 129551619 - TNIK chr3 170946012 - Exonic hg19 STAD TCGA-BR-A4PE-01A 5 2 Out-of-frame Intra-chr q22.1 q26.31 STE:STE20 51201 ChimerSeq STARFusion TCGA_RNA-Seq RAB7A-PEX5L RAB7A chr3 128514263 + PEX5L chr3 179689453 - Exonic hg19 STAD TCGA-BR-A4PE-01A 4 2 Out-of-frame Intra-chr q21.3 Tumor suppressor gene q26.33 51202 ChimerSeq STARFusion TCGA_RNA-Seq TMCC1-TNIK TMCC1 chr3 129599152 - TNIK chr3 170946010 - Exonic hg19 STAD TCGA-BR-A4PE-01A 4 2 5'UTR-CDS Intra-chr q22.1 q26.31 STE:STE20 51203 ChimerSeq STARFusion TCGA_RNA-Seq C6orf106-OFCC1 C6orf106 chr6 34614378 - OFCC1 chr6 9845826 - Exonic hg19 STAD TCGA-BR-A4PE-01A 4 1 Out-of-frame Intra-chr p21.31 p24.3 51204 ChimerSeq STARFusion TCGA_RNA-Seq MCM7-SNRPB MCM7 chr7 99695476 - SNRPB chr20 2451424 - Exonic hg19 STAD TCGA-BR-A4PE-01A 4 0 Out-of-frame Inter-chr q22.1 p13 51205 ChimerSeq STARFusion TCGA_RNA-Seq CLDN18-LYZ CLDN18 chr3 137750979 + LYZ chr12 69747546 + Exonic hg19 STAD TCGA-BR-A4PE-01A 3 2 Out-of-frame Inter-chr q22.3 q15 51206 ChimerSeq STARFusion TCGA_RNA-Seq R3HCC1-LOXL2 R3HCC1 chr8 23146666 + LOXL2 chr8 23225947 - Exonic hg19 STAD TCGA-BR-A4PE-01A 3 2 5'UTR-5'UTR Intra-chr p21.3 p21.3 51207 ChimerSeq STARFusion TCGA_RNA-Seq FBXO42-ERCC5 FBXO42 chr1 16678750 - ERCC5 chr13 103506638 + Exonic hg19 STAD TCGA-BR-A4PE-01A 3 0 5'UTR-CDS Inter-chr p36.13 q33.1 Oncogene 51208 ChimerSeq STARFusion TCGA_RNA-Seq GPX2-CORO1B GPX2 chr14 65409312 - CORO1B chr11 67206277 - Exonic hg19 STAD TCGA-BR-A4PE-01A 3 0 Out-of-frame Inter-chr q23.3 q13.2 51209 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-TCAP GRB7 chr17 37895013 + TCAP chr17 37822070 + Exonic hg19 STAD TCGA-BR-A4PE-01A 3 0 Out-of-frame Intra-chr q12 q12 51210 ChimerSeq STARFusion TCGA_RNA-Seq GTF3C2-LRRC57 GTF3C2 chr2 27573453 - LRRC57 chr15 42835651 - Exonic hg19 STAD TCGA-BR-A4PE-01A 3 0 Out-of-frame Inter-chr p23.3 q15.2 51211 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPLP2-RPL11 HNRNPLP2 chr15 34782005 - RPL11 chr1 24021150 + Exonic hg19 STAD TCGA-BR-A4PE-01A 3 0 Out-of-frame Inter-chr q14 p36.11 Tumor suppressor gene 51212 ChimerSeq STARFusion TCGA_RNA-Seq MBTD1-UTP18 MBTD1 chr17 49336504 - UTP18 chr17 49340635 + Exonic hg19 STAD TCGA-BR-A4PE-01A 3 0 5'UTR-CDS Intra-chr q21.33 q21.33 Seq+ 51213 ChimerSeq STARFusion TCGA_RNA-Seq RHOBTB1-LINC00845 RHOBTB1 chr10 62701562 - LINC00845 chr10 62785550 + Exonic hg19 STAD TCGA-BR-A4PE-01A 3 0 Out-of-frame Intra-chr q21.2 q21.2 51214 ChimerSeq STARFusion TCGA_RNA-Seq TNIK-CCDC37 TNIK chr3 170893041 - CCDC37 chr3 126126015 + Exonic hg19 STAD TCGA-BR-A4PE-01A 3 0 Out-of-frame Intra-chr q26.31 STE:STE20 Seq+ 51215 ChimerSeq STARFusion TCGA_RNA-Seq MBNL1-ABCC5 MBNL1 chr3 151986881 + ABCC5 chr3 183732235 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 2 5'UTR-5'UTR Intra-chr q25.1 q27.1 Seq+ 51216 ChimerSeq STARFusion TCGA_RNA-Seq HECTD1-PGBD2 HECTD1 chr14 31675003 - PGBD2 chr1 249211478 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 1 CDS-5'UTR Inter-chr q12 q44 51217 ChimerSeq STARFusion TCGA_RNA-Seq PLCXD2-RAB7A PLCXD2 chr3 111394255 + RAB7A chr3 128525215 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 1 Out-of-frame Intra-chr q13.2 q21.3 Tumor suppressor gene 51218 ChimerSeq STARFusion TCGA_RNA-Seq ACTR10-PDZD11 ACTR10 chr14 58669645 + PDZD11 chrX 69508363 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 In-Frame Inter-chr q23.1 q13.1 51219 ChimerSeq STARFusion TCGA_RNA-Seq AGFG1-SMC4 AGFG1 chr2 228356356 + SMC4 chr3 160129708 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 In-Frame Inter-chr q36.3 q25.33 51220 ChimerSeq STARFusion TCGA_RNA-Seq AMBRA1-ARHGAP1 AMBRA1 chr11 46563495 - ARHGAP1 chr11 46717706 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 CDS-5'UTR Intra-chr p11.2 p11.2 Seq+ 51221 ChimerSeq STARFusion TCGA_RNA-Seq APOLD1-BUB1 APOLD1 chr12 12879030 + BUB1 chr2 111399811 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 Out-of-frame Inter-chr p13.1 q13 Other:BUB 51222 ChimerSeq STARFusion TCGA_RNA-Seq ATP5B-ALDOA ATP5B chr12 57037187 - ALDOA chr16 30080627 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 In-Frame Inter-chr q13.3 p11.2 51223 ChimerSeq STARFusion TCGA_RNA-Seq C3orf27-SCNM1 C3orf27 chr3 128294109 - SCNM1 chr1 151138947 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 5'UTR-5'UTR Inter-chr q21.3 51224 ChimerSeq STARFusion TCGA_RNA-Seq CALM1-NRDE2 CALM1 chr14 90870858 + NRDE2 chr14 90784457 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 Out-of-frame Intra-chr q32.11 q32.11 51225 ChimerSeq STARFusion TCGA_RNA-Seq CCDC109B-SEC24B CCDC109B chr4 110585550 + SEC24B chr4 110459649 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 Out-of-frame Intra-chr q25 51226 ChimerSeq STARFusion TCGA_RNA-Seq CCDC50-ATP13A3 CCDC50 chr3 191047512 + ATP13A3 chr3 194182965 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 CDS-5'UTR Intra-chr q28 q29 51227 ChimerSeq STARFusion TCGA_RNA-Seq CCDC92-FAM101A CCDC92 chr12 124457076 - FAM101A chr12 124458433 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 5'UTR-5'UTR Intra-chr 51228 ChimerSeq STARFusion TCGA_RNA-Seq CCDC92-ZNF664 CCDC92 chr12 124457076 - ZNF664 chr12 124458433 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 5'UTR-5'UTR Intra-chr q24.31 Transcription factor 51229 ChimerSeq STARFusion TCGA_RNA-Seq CCNY-TRA2A CCNY chr10 35842113 + TRA2A chr7 23562051 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 Out-of-frame Inter-chr p11.21 p15.3 51230 ChimerSeq STARFusion TCGA_RNA-Seq CREB1-EMC2 CREB1 chr2 208435045 + EMC2 chr8 109462052 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 Out-of-frame Inter-chr q33.3 Oncogene Transcription factor q23.1 51231 ChimerSeq STARFusion TCGA_RNA-Seq CRIM1-FEZ2 CRIM1 chr2 36583766 + FEZ2 chr2 36785656 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 Out-of-frame Intra-chr p22.2 p22.2 51232 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP1-DNM3OS CTDSP1 chr2 219267128 + DNM3OS chr1 172113577 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 CDS-3'UTR Inter-chr q35 q24.3 51233 ChimerSeq STARFusion TCGA_RNA-Seq CTPS2-AK7 CTPS2 chrX 16627664 - AK7 chr14 96904172 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 Out-of-frame Inter-chr p22.2 q32.2 51234 ChimerSeq STARFusion TCGA_RNA-Seq CTSZ-NELFCD CTSZ chr20 57571694 - NELFCD chr20 57569697 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 Out-of-frame Intra-chr q13.32 q13.32 51235 ChimerSeq STARFusion TCGA_RNA-Seq DGCR8-PDGFRB DGCR8 chr22 20067906 + PDGFRB chr5 149516616 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 5'UTR-5'UTR Inter-chr q11.21 q32 Oncogene 51236 ChimerSeq STARFusion TCGA_RNA-Seq DHRS12-PIBF1 DHRS12 chr13 52364147 - PIBF1 chr13 73539412 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 Out-of-frame Intra-chr q14.3 q21.33 51237 ChimerSeq STARFusion TCGA_RNA-Seq DUSP11-PPP1CB DUSP11 chr2 73993545 - PPP1CB chr2 29006773 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 Out-of-frame Intra-chr p13.1 p23.2 51238 ChimerSeq STARFusion TCGA_RNA-Seq DUSP11-SPDYA DUSP11 chr2 73993545 - SPDYA chr2 29006773 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 CDS-5'UTR Intra-chr p13.1 p23.2 51239 ChimerSeq STARFusion TCGA_RNA-Seq EML4-PPM1B EML4 chr2 42472827 + PPM1B chr2 44445106 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 In-Frame Intra-chr p21 Oncogene p21 51240 ChimerSeq STARFusion TCGA_RNA-Seq EPC1-KIF13B EPC1 chr10 32667419 - KIF13B chr8 29102956 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 5'UTR-CDS Inter-chr p11.22 p12 51241 ChimerSeq STARFusion TCGA_RNA-Seq FNIP2-NDUFA10 FNIP2 chr4 159791621 + NDUFA10 chr2 240929599 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 Out-of-frame Inter-chr q32.1 51242 ChimerSeq STARFusion TCGA_RNA-Seq FUT8-SERPINB6 FUT8 chr14 65879932 + SERPINB6 chr6 2959576 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 5'UTR-5'UTR Inter-chr q23.3 p25.2 51243 ChimerSeq STARFusion TCGA_RNA-Seq GNPAT-LGALS8 GNPAT chr1 231396429 + LGALS8 chr1 236706860 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 In-Frame Intra-chr q42.2 q43 51244 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-TOP2A GRB7 chr17 37894386 + TOP2A chr17 38548989 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 5'UTR-CDS Intra-chr q12 q21.2 51245 ChimerSeq STARFusion TCGA_RNA-Seq HDGFRP2-CHAF1A HDGFRP2 chr19 4496402 + CHAF1A chr19 4405909 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 Out-of-frame Intra-chr p13.3 51246 ChimerSeq STARFusion TCGA_RNA-Seq HIVEP1-CD47 HIVEP1 chr6 12015901 + CD47 chr3 107766139 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 In-Frame Inter-chr p24.1 Tumor suppressor gene Transcription factor q13.12 51247 ChimerSeq STARFusion TCGA_RNA-Seq HOMER1-OSER1 HOMER1 chr5 78808593 - OSER1 chr20 42835638 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 Out-of-frame Inter-chr q14.1 q13.12 51248 ChimerSeq STARFusion TCGA_RNA-Seq IFI27-NME2 IFI27 chr14 94577143 + NME2 chr17 49245603 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 5'UTR-CDS Inter-chr q32.12 q21.33 Transcription factor 51249 ChimerSeq STARFusion TCGA_RNA-Seq IL1RAP-ARHGAP31 IL1RAP chr3 190282142 + ARHGAP31 chr3 119099751 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 Out-of-frame Intra-chr q28 q13.32 51250 ChimerSeq STARFusion TCGA_RNA-Seq IQGAP1-TDRD5 IQGAP1 chr15 90969498 + TDRD5 chr1 179620002 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 In-Frame Inter-chr q26.1 q25.2 51251 ChimerSeq STARFusion TCGA_RNA-Seq KNTC1-KPNA3 KNTC1 chr12 123087287 + KPNA3 chr13 50276034 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 Out-of-frame Inter-chr q24.31 q14.2 51252 ChimerSeq STARFusion TCGA_RNA-Seq LASP1-PRPF19 LASP1 chr17 37054772 + PRPF19 chr11 60670353 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 In-Frame Inter-chr q12 q12.2 51253 ChimerSeq STARFusion TCGA_RNA-Seq LCOR-PDLIM1 LCOR chr10 98711953 + PDLIM1 chr10 97007123 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 In-Frame Intra-chr q24.1 Transcription factor q23.33 51254 ChimerSeq STARFusion TCGA_RNA-Seq LGALS3-ETV5 LGALS3 chr14 55596018 + ETV5 chr3 185783861 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 5'UTR-CDS Inter-chr q22.3 q27.2 Oncogene Transcription factor 51255 ChimerSeq STARFusion TCGA_RNA-Seq MACROD2-PLAG1 MACROD2 chr20 13983050 + PLAG1 chr8 57083748 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 CDS-5'UTR Inter-chr p12.1 q12.1 Oncogene Transcription factor 51256 ChimerSeq STARFusion TCGA_RNA-Seq MAL2-SLC44A1 MAL2 chr8 120233997 + SLC44A1 chr9 108061501 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 In-Frame Inter-chr q24.12 q31.1 51257 ChimerSeq STARFusion TCGA_RNA-Seq MAN2B1-ERH MAN2B1 chr19 12772074 - ERH chr14 69861629 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 In-Frame Inter-chr p13.13 q24.1 Seq+ 51258 ChimerSeq STARFusion TCGA_RNA-Seq MBTD1-ZNF432 MBTD1 chr17 49337196 - ZNF432 chr19 52550313 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 5'UTR-5'UTR Inter-chr q21.33 q13.41 Transcription factor 51259 ChimerSeq STARFusion TCGA_RNA-Seq MCUR1-RANBP9 MCUR1 chr6 13799065 - RANBP9 chr6 13697128 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 Out-of-frame Intra-chr p23 p23 Tumor suppressor gene 51260 ChimerSeq STARFusion TCGA_RNA-Seq MROH1-RNF31 MROH1 chr8 145255444 + RNF31 chr14 24629073 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 Out-of-frame Inter-chr q24.3 q12 51261 ChimerSeq STARFusion TCGA_RNA-Seq MRPS18A-FAM120A MRPS18A chr6 43655405 - FAM120A chr9 96305504 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 In-Frame Inter-chr p21.1 q22.31 51262 ChimerSeq STARFusion TCGA_RNA-Seq MTBP-ABCB7 MTBP chr8 121463562 + ABCB7 chrX 74288971 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 In-Frame Inter-chr q24.12 q13.3 51263 ChimerSeq STARFusion TCGA_RNA-Seq NDC80-HIF1A NDC80 chr18 2577356 + HIF1A chr14 62211423 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 Out-of-frame Inter-chr p11.32 q23.2 Oncogene Tumor suppressor gene Transcription factor 51264 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-TERF2 NFAT5 chr16 69600277 + TERF2 chr16 69406258 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Transcription factor 51265 ChimerSeq STARFusion TCGA_RNA-Seq NSD1-SPIN2A NSD1 chr5 176619020 + SPIN2A chrX 57163035 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 CDS-5'UTR Inter-chr q35.3 Oncogene p11.21 51266 ChimerSeq STARFusion TCGA_RNA-Seq PDIA3-NAA50 PDIA3 chr15 44038904 + NAA50 chr3 113442942 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 In-Frame Inter-chr q15.3 q13.31 51267 ChimerSeq STARFusion TCGA_RNA-Seq PGM1-KIAA0368 PGM1 chr1 64120137 + KIAA0368 chr9 114152003 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 In-Frame Inter-chr p31.3 q31.3 51268 ChimerSeq STARFusion TCGA_RNA-Seq PI4K2B-USP10 PI4K2B chr4 25162375 + USP10 chr16 84779219 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 Out-of-frame Inter-chr p15.2 q24.1 51269 ChimerSeq STARFusion TCGA_RNA-Seq PLXNB2-RPL23 PLXNB2 chr22 50745982 - RPL23 chr17 37008985 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 5'UTR-CDS Inter-chr q13.33 q12 51270 ChimerSeq STARFusion TCGA_RNA-Seq PMM2-STOML2 PMM2 chr16 8900264 + STOML2 chr9 35100169 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 Out-of-frame Inter-chr p13.2 p13.3 51271 ChimerSeq STARFusion TCGA_RNA-Seq PTPRH-NVL PTPRH chr19 55707890 - NVL chr1 224455835 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 Out-of-frame Inter-chr q13.42 q42.11 51272 ChimerSeq STARFusion TCGA_RNA-Seq RBM12B-TRIQK RBM12B chr8 94752857 - TRIQK chr8 93966792 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 5'UTR-5'UTR Intra-chr q22.1 q22.1 51273 ChimerSeq STARFusion TCGA_RNA-Seq RNF213-RBCK1 RNF213 chr17 78282971 + RBCK1 chr20 407957 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 In-Frame Inter-chr q25.3 Oncogene p13 Transcription factor Seq+ 51274 ChimerSeq STARFusion TCGA_RNA-Seq RPS12-LINC00152 RPS12 chr6 133135752 + LINC00152 chr2 87820726 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 5'UTR-5'UTR Inter-chr q23.2 51275 ChimerSeq STARFusion TCGA_RNA-Seq RUNX1-NAA38 RUNX1 chr21 36252854 - NAA38 chr7 117831966 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor p13.1 51276 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A3-ETHE1 SLC39A3 chr19 2737046 - ETHE1 chr19 44015718 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 In-Frame Intra-chr p13.3 q13.31 51277 ChimerSeq STARFusion TCGA_RNA-Seq SMC4-PHGDH SMC4 chr3 160137331 + PHGDH chr1 120254510 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 CDS-5'UTR Inter-chr q25.33 p12 51278 ChimerSeq STARFusion TCGA_RNA-Seq SMG5-C1orf27 SMG5 chr1 156244388 - C1orf27 chr1 186375215 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 In-Frame Intra-chr q22 q31.1 51279 ChimerSeq STARFusion TCGA_RNA-Seq SPAG9-KPNA3 SPAG9 chr17 49197715 - KPNA3 chr13 50321129 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 In-Frame Inter-chr q21.33 q14.2 51280 ChimerSeq STARFusion TCGA_RNA-Seq SPIN3-FBXO3 SPIN3 chrX 57021156 - FBXO3 chr11 33763630 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 3'UTR-CDS Inter-chr p11.21 p13 51281 ChimerSeq STARFusion TCGA_RNA-Seq SPINT2-SIPA1L3 SPINT2 chr19 38755638 + SIPA1L3 chr19 38597177 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 In-Frame Intra-chr q13.2 Tumor suppressor gene q13.13 51282 ChimerSeq STARFusion TCGA_RNA-Seq THTPA-EEF1D THTPA chr14 24025552 + EEF1D chr8 144669022 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 5'UTR-5'UTR Inter-chr q11.2 51283 ChimerSeq STARFusion TCGA_RNA-Seq TMED2-TGIF1 TMED2 chr12 124074996 + TGIF1 chr18 3456352 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 In-Frame Inter-chr q24.31 p11.31 Transcription factor 51284 ChimerSeq STARFusion TCGA_RNA-Seq TMEM117-PSMB1 TMEM117 chr12 44338145 + PSMB1 chr6 170858201 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 In-Frame Inter-chr q12 51285 ChimerSeq STARFusion TCGA_RNA-Seq TRIM56-MEPCE TRIM56 chr7 100728852 + MEPCE chr7 100030542 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 5'UTR-CDS Intra-chr q22.1 q22.1 51286 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN3-SEPT7 TSPAN3 chr15 77363234 - SEPT7 chr7 35903162 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 Out-of-frame Inter-chr q24.3 p14.2 51287 ChimerSeq STARFusion TCGA_RNA-Seq VANGL1-CSDE1 VANGL1 chr1 116184707 + CSDE1 chr1 115292828 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 5'UTR-5'UTR Intra-chr p13.1 p13.2 51288 ChimerSeq STARFusion TCGA_RNA-Seq WDR1-MCTP2 WDR1 chr4 10105520 - MCTP2 chr15 94983405 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 Out-of-frame Inter-chr p16.1 q26.2 51289 ChimerSeq STARFusion TCGA_RNA-Seq WDR45B-SEC31A WDR45B chr17 80601825 - SEC31A chr4 83750211 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 Out-of-frame Inter-chr q25.3 q21.22 51290 ChimerSeq STARFusion TCGA_RNA-Seq XKR9-NCOA2 XKR9 chr8 71619388 + NCOA2 chr8 71209035 - Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 CDS-5'UTR Intra-chr q13.3 q13.3 Oncogene Transcription factor 51291 ChimerSeq STARFusion TCGA_RNA-Seq XRCC5-RPL37A XRCC5 chr2 216974180 + RPL37A chr2 217364672 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 In-Frame Intra-chr q35 Tumor suppressor gene q35 Seq+ 51292 ChimerSeq STARFusion TCGA_RNA-Seq XRCC5-TRIM22 XRCC5 chr2 216974180 + TRIM22 chr11 5719545 + Exonic hg19 STAD TCGA-BR-A4PE-01A 2 0 In-Frame Inter-chr q35 Tumor suppressor gene p15.4 51293 ChimerSeq STARFusion TCGA_RNA-Seq RPL13P12-PNMA2 RPL13P12 chr17 17286669 - PNMA2 chr8 26364477 - Exonic hg19 STAD TCGA-R5-A7ZI-01A 14 0 Out-of-frame Inter-chr p21.2 51294 ChimerSeq STARFusion TCGA_RNA-Seq CP-WWTR1 CP chr3 148905839 - WWTR1 chr3 149260324 - Exonic hg19 STAD TCGA-R5-A7ZI-01A 9 4 In-Frame Intra-chr q25.1 q25.1 Seq+ 51295 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R12C-PTPRH PPP1R12C chr19 55623835 - PTPRH chr19 55693519 - Exonic hg19 STAD TCGA-BR-8059-01A 21 3 Out-of-frame Intra-chr q13.42 q13.42 Seq+ 51296 ChimerSeq STARFusion TCGA_RNA-Seq NET1-TUBAL3 NET1 chr10 5454783 + TUBAL3 chr10 5437438 - Exonic hg19 STAD TCGA-BR-8059-01A 9 8 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 51297 ChimerSeq STARFusion TCGA_RNA-Seq HERC4-CCDC6 HERC4 chr10 69692354 - CCDC6 chr10 61554355 - Exonic hg19 STAD TCGA-BR-8059-01A 4 7 Out-of-frame Intra-chr q21.3 q21.2 Seq+ 51298 ChimerSeq STARFusion TCGA_RNA-Seq FAM213A-LYZ FAM213A chr10 82192105 + LYZ chr12 69747553 + Exonic hg19 STAD TCGA-BR-8059-01A 3 3 Out-of-frame Inter-chr q23.1 q15 51299 ChimerSeq STARFusion TCGA_RNA-Seq ACBD3-PEA15 ACBD3 chr1 226333220 - PEA15 chr1 160175193 + Exonic hg19 STAD TCGA-BR-8059-01A 3 0 Out-of-frame Intra-chr q42.12 q23.2 Tumor suppressor gene 51300 ChimerSeq STARFusion TCGA_RNA-Seq HYI-RPLP1 HYI chr1 43918629 - RPLP1 chr15 69745181 + Exonic hg19 STAD TCGA-BR-8059-01A 3 0 Out-of-frame Inter-chr p34.2 q23 51301 ChimerSeq STARFusion TCGA_RNA-Seq LYRM9-MTATP6P1 LYRM9 chr17 26205935 - MTATP6P1 chr1 569507 + Exonic hg19 STAD TCGA-BR-8059-01A 3 0 Out-of-frame Inter-chr q11.2 p36.33 51302 ChimerSeq STARFusion TCGA_RNA-Seq MDM4-CYP3A5 MDM4 chr1 204518975 + CYP3A5 chr7 99257879 - Exonic hg19 STAD TCGA-BR-8059-01A 3 0 Out-of-frame Inter-chr q32.1 Oncogene q22.1 51303 ChimerSeq STARFusion TCGA_RNA-Seq MINOS1-CTTN MINOS1 chr1 19953117 + CTTN chr11 70253806 + Exonic hg19 STAD TCGA-BR-8059-01A 3 0 Out-of-frame Inter-chr p36.13 q13.3 51304 ChimerSeq STARFusion TCGA_RNA-Seq PEBP1-SLC52A2 PEBP1 chr12 118583065 + SLC52A2 chr8 145583546 + Exonic hg19 STAD TCGA-BR-8059-01A 3 0 Out-of-frame Inter-chr q24.23 Tumor suppressor gene q24.3 51305 ChimerSeq STARFusion TCGA_RNA-Seq PQLC1-TXNL4A PQLC1 chr18 77703329 - TXNL4A chr18 77737701 - Exonic hg19 STAD TCGA-BR-8059-01A 3 0 Out-of-frame Intra-chr q23 q23 51306 ChimerSeq STARFusion TCGA_RNA-Seq MINOS1-TIPARP MINOS1 chr1 19923603 + TIPARP chr3 156411809 + Exonic hg19 STAD TCGA-BR-8059-01A 2 1 Out-of-frame Inter-chr p36.13 q25.31 51307 ChimerSeq STARFusion TCGA_RNA-Seq AIMP1-ARHGAP10 AIMP1 chr4 107237751 + ARHGAP10 chr4 148867768 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 Out-of-frame Intra-chr q24 Tumor suppressor gene q31.23 51308 ChimerSeq STARFusion TCGA_RNA-Seq AP5Z1-EHMT1 AP5Z1 chr7 4815387 + EHMT1 chr9 140693265 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 Out-of-frame Inter-chr p22.1 q34.3 51309 ChimerSeq STARFusion TCGA_RNA-Seq APCDD1-RAB31 APCDD1 chr18 10455036 + RAB31 chr18 9775275 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 Out-of-frame Intra-chr p11.22 p11.22 51310 ChimerSeq STARFusion TCGA_RNA-Seq ASL-DLGAP4 ASL chr7 65541080 + DLGAP4 chr20 35152653 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 Out-of-frame Inter-chr q11.21 q11.23 51311 ChimerSeq STARFusion TCGA_RNA-Seq ASPSCR1-TGIF2 ASPSCR1 chr17 79943483 + TGIF2 chr20 35207144 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 5'UTR-5'UTR Inter-chr q25.3 q11.23 Transcription factor 51312 ChimerSeq STARFusion TCGA_RNA-Seq ATP2A2-TNS1 ATP2A2 chr12 110784126 + TNS1 chr2 218686661 - Exonic hg19 STAD TCGA-BR-8059-01A 2 0 In-Frame Inter-chr q24.11 q35 51313 ChimerSeq STARFusion TCGA_RNA-Seq BLCAP-SRC BLCAP chr20 36156195 - SRC chr20 35993607 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 5'UTR-5'UTR Intra-chr q11.23 Tumor suppressor gene q11.23 TK:Src Oncogene 51314 ChimerSeq STARFusion TCGA_RNA-Seq CAPN15-TMEM8A CAPN15 chr16 583998 + TMEM8A chr16 427848 - Exonic hg19 STAD TCGA-BR-8059-01A 2 0 Out-of-frame Intra-chr p13.3 p13.3 51315 ChimerSeq STARFusion TCGA_RNA-Seq CAPZA2-COG5 CAPZA2 chr7 116502704 + COG5 chr7 106964966 - Exonic hg19 STAD TCGA-BR-8059-01A 2 0 In-Frame Intra-chr q31.2 Seq+ 51316 ChimerSeq STARFusion TCGA_RNA-Seq CD63-CAPN2 CD63 chr12 56120484 - CAPN2 chr1 223946972 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 In-Frame Inter-chr q13.2 q41 51317 ChimerSeq STARFusion TCGA_RNA-Seq CDK6-POR CDK6 chr7 92462405 - POR chr7 75583307 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 CDS-5'UTR Intra-chr q21.2 CMGC:CDK Oncogene Tumor suppressor gene q11.23 51318 ChimerSeq STARFusion TCGA_RNA-Seq CNST-SCCPDH CNST chr1 246729965 + SCCPDH chr1 246921528 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 5'UTR-CDS Intra-chr q44 q44 51319 ChimerSeq STARFusion TCGA_RNA-Seq CORO1C-ATP5J2 CORO1C chr12 109125205 - ATP5J2 chr7 99057816 - Exonic hg19 STAD TCGA-BR-8059-01A 2 0 5'UTR-CDS Inter-chr q24.11 q22.1 51320 ChimerSeq STARFusion TCGA_RNA-Seq CORO1C-PTCD1 CORO1C chr12 109125205 - PTCD1 chr7 99057816 - Exonic hg19 STAD TCGA-BR-8059-01A 2 0 5'UTR-5'UTR Inter-chr q24.11 q22.1 51321 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-PSMD3 ERBB2 chr17 37863394 + PSMD3 chr17 38144936 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 In-Frame Intra-chr q12 Oncogene q21.1 51322 ChimerSeq STARFusion TCGA_RNA-Seq GOT1-CEBPZ GOT1 chr10 101190205 - CEBPZ chr2 37444180 - Exonic hg19 STAD TCGA-BR-8059-01A 2 0 Out-of-frame Inter-chr q24.2 p22.2 Transcription factor 51323 ChimerSeq STARFusion TCGA_RNA-Seq GPR107-FNBP1 GPR107 chr9 132816352 + FNBP1 chr9 132757237 - Exonic hg19 STAD TCGA-BR-8059-01A 2 0 In-Frame Intra-chr q34.11 q34.11 51324 ChimerSeq STARFusion TCGA_RNA-Seq GSTT1-PLLP GSTT1 chr22 24384120 - PLLP chr16 57295982 - Exonic hg19 STAD TCGA-BR-8059-01A 2 0 Out-of-frame Inter-chr Tumor suppressor gene q13 51325 ChimerSeq STARFusion TCGA_RNA-Seq INTS10-HERC2 INTS10 chr8 19703308 + HERC2 chr15 28431898 - Exonic hg19 STAD TCGA-BR-8059-01A 2 0 Out-of-frame Inter-chr p21.3 51326 ChimerSeq STARFusion TCGA_RNA-Seq ITGB4-CCDC18 ITGB4 chr17 73738842 + CCDC18 chr1 93744020 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 Out-of-frame Inter-chr q25.1 p22.1 51327 ChimerSeq STARFusion TCGA_RNA-Seq IWS1-CCNY IWS1 chr2 128281252 - CCNY chr10 35805451 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 In-Frame Inter-chr q14.3 p11.21 51328 ChimerSeq STARFusion TCGA_RNA-Seq KLF3-FXR2 KLF3 chr4 38666082 + FXR2 chr17 7497322 - Exonic hg19 STAD TCGA-BR-8059-01A 2 0 5'UTR-CDS Inter-chr p14 Transcription factor p13.1 51329 ChimerSeq STARFusion TCGA_RNA-Seq LMO4-TMEM33 LMO4 chr1 87805885 + TMEM33 chr4 41951319 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 Out-of-frame Inter-chr p22.3 p13 51330 ChimerSeq STARFusion TCGA_RNA-Seq LMO7-TPP2 LMO7 chr13 76335174 + TPP2 chr13 103309406 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 Out-of-frame Intra-chr q22.2 q33.1 51331 ChimerSeq STARFusion TCGA_RNA-Seq MAGI2-LRPPRC MAGI2 chr7 79082336 - LRPPRC chr2 44184590 - Exonic hg19 STAD TCGA-BR-8059-01A 2 0 In-Frame Inter-chr q21.11 p21 51332 ChimerSeq STARFusion TCGA_RNA-Seq MED15-CDC42EP1 MED15 chr22 20922918 + CDC42EP1 chr22 37962079 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 CDS-5'UTR Intra-chr q11.21 q13.1 51333 ChimerSeq STARFusion TCGA_RNA-Seq MTFR1-MTERFD1 MTFR1 chr8 66594686 + MTERFD1 chr8 97269342 - Exonic hg19 STAD TCGA-BR-8059-01A 2 0 Out-of-frame Intra-chr q13.1 51334 ChimerSeq STARFusion TCGA_RNA-Seq MYO1D-ZNF30 MYO1D chr17 31039006 - ZNF30 chr19 35422747 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 In-Frame Inter-chr q11.2 q13.11 Transcription factor 51335 ChimerSeq STARFusion TCGA_RNA-Seq NADK-SNX27 NADK chr1 1711344 - SNX27 chr1 151630711 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 5'UTR-CDS Intra-chr p36.33 q21.3 Seq+ 51336 ChimerSeq STARFusion TCGA_RNA-Seq OGG1-RNPC3 OGG1 chr3 9792107 + RNPC3 chr1 104097656 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 CDS-3'UTR Inter-chr p25.3 p21.1 51337 ChimerSeq STARFusion TCGA_RNA-Seq PARK2-SASH1 PARK2 chr6 163148694 - SASH1 chr6 148789681 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 Out-of-frame Intra-chr Tumor suppressor gene q24.3 Tumor suppressor gene 51338 ChimerSeq STARFusion TCGA_RNA-Seq PCBD1-CASZ1 PCBD1 chr10 72644909 - CASZ1 chr1 10697465 - Exonic hg19 STAD TCGA-BR-8059-01A 2 0 CDS-3'UTR Inter-chr q22.1 p36.22 Transcription factor 51339 ChimerSeq STARFusion TCGA_RNA-Seq PHF14-OSBPL3 PHF14 chr7 11091407 + OSBPL3 chr7 24903218 - Exonic hg19 STAD TCGA-BR-8059-01A 2 0 Out-of-frame Intra-chr p21.3 p15.3 Seq+ 51340 ChimerSeq STARFusion TCGA_RNA-Seq POLR3E-GNAS POLR3E chr16 22330267 + GNAS chr20 57470667 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 Out-of-frame Inter-chr q13.32 Oncogene 51341 ChimerSeq STARFusion TCGA_RNA-Seq PRKAG2-RHEB PRKAG2 chr7 151329155 - RHEB chr7 151188100 - Exonic hg19 STAD TCGA-BR-8059-01A 2 0 In-Frame Intra-chr q36.1 q36.1 Oncogene 51342 ChimerSeq STARFusion TCGA_RNA-Seq RAB28-SH3TC1 RAB28 chr4 13462323 - SH3TC1 chr4 8233703 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 In-Frame Intra-chr p15.33 p16.1 51343 ChimerSeq STARFusion TCGA_RNA-Seq RALY-ADAR RALY chr20 32619410 + ADAR chr1 154562885 - Exonic hg19 STAD TCGA-BR-8059-01A 2 0 5'UTR-CDS Inter-chr q11.22 q21.3 51344 ChimerSeq STARFusion TCGA_RNA-Seq RBMX-VSTM2L RBMX chrX 135962756 - VSTM2L chr20 36572383 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 5'UTR-CDS Inter-chr q26.3 Tumor suppressor gene q11.23 51345 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-PDIA3 RCC1 chr1 28834672 + PDIA3 chr15 44057648 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 5'UTR-CDS Inter-chr p35.3 q15.3 51346 ChimerSeq STARFusion TCGA_RNA-Seq RNASEH2B-ITM2B RNASEH2B chr13 51523641 + ITM2B chr13 48827944 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 In-Frame Intra-chr q14.3 q14.2 51347 ChimerSeq STARFusion TCGA_RNA-Seq RREB1-SEPT9 RREB1 chr6 7108935 + SEPT9 chr17 75478226 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 5'UTR-5'UTR Inter-chr p24.3 Transcription factor 51348 ChimerSeq STARFusion TCGA_RNA-Seq SEMA4B-IQGAP1 SEMA4B chr15 90728313 + IQGAP1 chr15 91030186 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 5'UTR-CDS Intra-chr q26.1 q26.1 51349 ChimerSeq STARFusion TCGA_RNA-Seq SEPT2-ANKRD11 SEPT2 chr2 242255397 + ANKRD11 chr16 89484776 - Exonic hg19 STAD TCGA-BR-8059-01A 2 0 5'UTR-5'UTR Inter-chr q37.3 q24.3 51350 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-PDIA3 SNHG3 chr1 28834672 + PDIA3 chr15 44057648 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 5'UTR-CDS Inter-chr p35.3 q15.3 51351 ChimerSeq STARFusion TCGA_RNA-Seq SNRPA1-THAP4 SNRPA1 chr15 101835302 - THAP4 chr2 242545888 - Exonic hg19 STAD TCGA-BR-8059-01A 2 0 In-Frame Inter-chr q26.3 q37.3 Transcription factor 51352 ChimerSeq STARFusion TCGA_RNA-Seq SPG20-PKNOX1 SPG20 chr13 36920719 - PKNOX1 chr21 44424436 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 5'UTR-5'UTR Inter-chr q13.3 q22.3 Tumor suppressor gene Transcription factor 51353 ChimerSeq STARFusion TCGA_RNA-Seq SQSTM1-ZADH2 SQSTM1 chr5 179238682 + ZADH2 chr18 72914295 - Exonic hg19 STAD TCGA-BR-8059-01A 2 0 5'UTR-CDS Inter-chr q35.3 q22.3 51354 ChimerSeq STARFusion TCGA_RNA-Seq SRM-PGAM5 SRM chr1 11115838 - PGAM5 chr12 133297264 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 Out-of-frame Inter-chr p36.22 TK:Src q24.33 Seq+ 51355 ChimerSeq STARFusion TCGA_RNA-Seq SRM-PXMP2 SRM chr1 11115838 - PXMP2 chr12 133297264 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 CDS-3'UTR Inter-chr p36.22 TK:Src q24.33 51356 ChimerSeq STARFusion TCGA_RNA-Seq SRP54-HSPD1 SRP54 chr14 35468855 + HSPD1 chr2 198351922 - Exonic hg19 STAD TCGA-BR-8059-01A 2 0 Out-of-frame Inter-chr q13.2 q33.1 Tumor suppressor gene 51357 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-CALD1 SSH2 chr17 28120912 - CALD1 chr7 134632259 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 In-Frame Inter-chr q11.2 q33 51358 ChimerSeq STARFusion TCGA_RNA-Seq SUMO1-SH3GLB2 SUMO1 chr2 203103163 - SH3GLB2 chr9 131772488 - Exonic hg19 STAD TCGA-BR-8059-01A 2 0 In-Frame Inter-chr q33.1 q34.11 51359 ChimerSeq STARFusion TCGA_RNA-Seq TAMM41-VGLL4 TAMM41 chr3 11849307 - VGLL4 chr3 11744521 - Exonic hg19 STAD TCGA-BR-8059-01A 2 0 CDS-5'UTR Intra-chr p25.2 p25.2 51360 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D8-MPHOSPH8 TBC1D8 chr2 101650006 - MPHOSPH8 chr13 20245346 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 In-Frame Inter-chr q11.2 q12.11 51361 ChimerSeq STARFusion TCGA_RNA-Seq TMBIM4-SRGAP1 TMBIM4 chr12 66563635 - SRGAP1 chr12 64436570 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 Out-of-frame Intra-chr q14.3 q14.2 51362 ChimerSeq STARFusion TCGA_RNA-Seq TMBIM4-SRGAP1 TMBIM4 chr12 66563635 - SRGAP1 chr12 64436570 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 Out-of-frame Intra-chr q14.3 q14.2 51363 ChimerSeq STARFusion TCGA_RNA-Seq TRIM2-LRBA TRIM2 chr4 154125712 + LRBA chr4 151408986 - Exonic hg19 STAD TCGA-BR-8059-01A 2 0 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 51364 ChimerSeq STARFusion TCGA_RNA-Seq TTC3-CUX1 TTC3 chr21 38445664 + CUX1 chr7 101916637 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 5'UTR-CDS Inter-chr q22.13 q22.1 Tumor suppressor gene Transcription factor 51365 ChimerSeq STARFusion TCGA_RNA-Seq USP40-C9orf3 USP40 chr2 234436053 - C9orf3 chr9 97848964 + Exonic hg19 STAD TCGA-BR-8059-01A 2 0 CDS-3'UTR Inter-chr q37.1 q22.32 51366 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-WSB1 ERBB2 chr17 37884130 + WSB1 chr17 25625630 + Exonic hg19 STAD TCGA-VQ-A8DZ-01A 35 40 Out-of-frame Intra-chr q12 Oncogene q11.1 Seq+ 51367 ChimerSeq STARFusion TCGA_RNA-Seq ABR-BAI1 ABR chr17 953290 - BAI1 chr8 143599499 + Exonic hg19 STAD TCGA-VQ-A8DZ-01A 27 9 In-Frame Inter-chr p13.3 Seq+ 51368 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-WSB1 ERBB2 chr17 37884055 + WSB1 chr17 25628814 + Exonic hg19 STAD TCGA-VQ-A8DZ-01A 7 40 Out-of-frame Intra-chr q12 Oncogene q11.1 Seq+ 51369 ChimerSeq STARFusion TCGA_RNA-Seq NIPAL2-RGS22 NIPAL2 chr8 99306231 - RGS22 chr8 100977658 - Exonic hg19 STAD TCGA-VQ-A8DZ-01A 12 4 In-Frame Intra-chr q22.2 q22.2 Seq+ 51370 ChimerSeq STARFusion TCGA_RNA-Seq NT5C3A-RP9P NT5C3A chr7 33102180 - RP9P chr7 32969720 - Exonic hg19 STAD TCGA-VQ-A8DZ-01A 9 6 Out-of-frame Intra-chr p14.3 p14.3 51371 ChimerSeq STARFusion TCGA_RNA-Seq RSF1-NEU3 RSF1 chr11 77475643 - NEU3 chr11 74705554 + Exonic hg19 STAD TCGA-VQ-A8DZ-01A 7 8 Out-of-frame Intra-chr q14.1 q13.4 Seq+ 51372 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-CFL1 MALAT1 chr11 65268285 + CFL1 chr11 65623713 - Exonic hg19 STAD TCGA-BR-8690-01A 37 52 5'UTR-CDS Intra-chr q13.1 q13.1 51373 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-CFL1 MALAT1 chr11 65266579 + CFL1 chr11 65623715 - Exonic hg19 STAD TCGA-BR-8690-01A 12 45 Out-of-frame Intra-chr q13.1 q13.1 51374 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-CFL1 MALAT1 chr11 65266585 + CFL1 chr11 65623713 - Exonic hg19 STAD TCGA-BR-8690-01A 12 45 5'UTR-CDS Intra-chr q13.1 q13.1 51375 ChimerSeq STARFusion TCGA_RNA-Seq EPCAM-DDI2 EPCAM chr2 47602438 + DDI2 chr1 15987288 + Exonic hg19 STAD TCGA-BR-8690-01A 21 6 CDS-3'UTR Inter-chr p21 p36.21 51376 ChimerSeq STARFusion TCGA_RNA-Seq EPCAM-RSC1A1 EPCAM chr2 47602438 + RSC1A1 chr1 15987288 + Exonic hg19 STAD TCGA-BR-8690-01A 21 6 Out-of-frame Inter-chr p21 p36.21 51377 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-CFL1 MALAT1 chr11 65268249 + CFL1 chr11 65623713 - Exonic hg19 STAD TCGA-BR-8690-01A 10 45 5'UTR-CDS Intra-chr q13.1 q13.1 51378 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-CFL1 MALAT1 chr11 65268230 + CFL1 chr11 65623713 - Exonic hg19 STAD TCGA-BR-8690-01A 7 45 5'UTR-CDS Intra-chr q13.1 q13.1 51379 ChimerSeq STARFusion TCGA_RNA-Seq PTPRH-PPP6R1 PTPRH chr19 55711604 - PPP6R1 chr19 55748338 - Exonic hg19 STAD TCGA-BR-8690-01A 9 7 Out-of-frame Intra-chr q13.42 q13.42 Seq+ 51380 ChimerSeq STARFusion TCGA_RNA-Seq TTC39B-PSIP1 TTC39B chr9 15267912 - PSIP1 chr9 15490122 - Exonic hg19 STAD TCGA-BR-8690-01A 7 3 In-Frame Intra-chr p22.3 p22.3 Oncogene 51381 ChimerSeq STARFusion TCGA_RNA-Seq SEC23A-ATP5EP2 SEC23A chr14 39501132 - ATP5EP2 chr13 28519701 + Exonic hg19 STAD TCGA-BR-8690-01A 7 0 Out-of-frame Inter-chr q21.1 q12.2 51382 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-DEFB123 TPX2 chr20 30354485 + DEFB123 chr20 30037832 + Exonic hg19 STAD TCGA-BR-8690-01A 5 2 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 51383 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-AVIL TBL1XR1 chr3 176738552 - AVIL chr12 58199948 - Exonic hg19 STAD TCGA-BR-8690-01A 5 0 Out-of-frame Inter-chr q26.32 q14.1 51384 ChimerSeq STARFusion TCGA_RNA-Seq MROH1-HSF1 MROH1 chr8 145278133 + HSF1 chr8 145532592 + Exonic hg19 STAD TCGA-BR-8690-01A 4 2 Out-of-frame Intra-chr q24.3 q24.3 Transcription factor 51385 ChimerSeq STARFusion TCGA_RNA-Seq NEAT1-MALAT1 NEAT1 chr11 65194161 + MALAT1 chr11 65273631 + Exonic hg19 STAD TCGA-3M-AB46-01A 20 0 Out-of-frame Intra-chr q13.1 q13.1 51386 ChimerSeq STARFusion TCGA_RNA-Seq PALLD-SCLT1 PALLD chr4 169849358 + SCLT1 chr4 129805512 - Exonic hg19 STAD TCGA-3M-AB46-01A 18 1 Out-of-frame Intra-chr q32.3 q28.2 51387 ChimerSeq STARFusion TCGA_RNA-Seq SPSB1-H6PD SPSB1 chr1 9353130 + H6PD chr1 9322118 + Exonic hg19 STAD TCGA-D7-6524-01A 16 0 5'UTR-CDS Intra-chr p36.22 p36.22 Seq+ 51388 ChimerSeq STARFusion TCGA_RNA-Seq REG1A-DDX52 REG1A chr2 79350526 + DDX52 chr17 35985986 - Exonic hg19 STAD TCGA-VQ-A91W-01A 38 0 Out-of-frame Inter-chr p12 q12 51389 ChimerSeq STARFusion TCGA_RNA-Seq FCGBP-SPTAN1 FCGBP chr19 40408824 - SPTAN1 chr9 131314900 + Exonic hg19 STAD TCGA-VQ-A91W-01A 16 0 Out-of-frame Inter-chr q34.11 51390 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-MMP20 TMEM123 chr11 102319543 - MMP20 chr11 102449873 - Exonic hg19 STAD TCGA-CD-8527-01A 310 70 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 51391 ChimerSeq STARFusion TCGA_RNA-Seq MGRN1-C16orf96 MGRN1 chr16 4675049 + C16orf96 chr16 4644352 + Exonic hg19 STAD TCGA-CD-8527-01A 20 3 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 51392 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KA3-BMX RPS6KA3 chrX 20284682 - BMX chrX 15526468 + Exonic hg19 STAD TCGA-CD-8527-01A 15 8 CDS-5'UTR Intra-chr p22.12 p22.2 TK:Tec Seq+ 51393 ChimerSeq STARFusion TCGA_RNA-Seq NOC3L-PLCE1 NOC3L chr10 96122587 - PLCE1 chr10 96087725 + Exonic hg19 STAD TCGA-CD-8527-01A 14 2 CDS-3'UTR Intra-chr q23.33 q23.33 Tumor suppressor gene Seq+ 51394 ChimerSeq STARFusion TCGA_RNA-Seq HAGH-ZNF598 HAGH chr16 1869898 - ZNF598 chr16 2048586 - Exonic hg19 STAD TCGA-CD-8527-01A 13 5 In-Frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 51395 ChimerSeq STARFusion TCGA_RNA-Seq LMTK3-DBP LMTK3 chr19 48994365 - DBP chr19 49134309 - Exonic hg19 STAD TCGA-CD-8527-01A 9 3 Out-of-frame Intra-chr q13.33 q13.33 Transcription factor Seq+ 51396 ChimerSeq STARFusion TCGA_RNA-Seq MGRN1-C16orf96 MGRN1 chr16 4675049 + C16orf96 chr16 4643932 + Exonic hg19 STAD TCGA-CD-8527-01A 6 3 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 51397 ChimerSeq STARFusion TCGA_RNA-Seq TMEM50B-ASAH1 TMEM50B chr21 34852145 - ASAH1 chr8 17917212 - Exonic hg19 STAD TCGA-CD-8527-01A 6 1 5'UTR-CDS Inter-chr p22 51398 ChimerSeq STARFusion TCGA_RNA-Seq TPCN1-OAS3 TPCN1 chr12 113664769 + OAS3 chr12 113405223 + Exonic hg19 STAD TCGA-CD-8527-01A 6 0 In-Frame Intra-chr q24.13 q24.13 51399 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KA3-BMX RPS6KA3 chrX 20285157 - BMX chrX 15526468 + Exonic hg19 STAD TCGA-CD-8527-01A 2 8 5'UTR-5'UTR Intra-chr p22.12 p22.2 TK:Tec Seq+ 51400 ChimerSeq STARFusion TCGA_RNA-Seq SMAD3-MAP2K5 SMAD3 chr15 67358698 + MAP2K5 chr15 67995675 + Exonic hg19 STAD TCGA-CD-8527-01A 3 2 Out-of-frame Intra-chr q22.33 Transcription factor q23 STE:STE7 Seq+ 51401 ChimerSeq STARFusion TCGA_RNA-Seq SMAD3-MAP2K5 SMAD3 chr15 67358698 + MAP2K5 chr15 67985856 + Exonic hg19 STAD TCGA-CD-8527-01A 3 2 Out-of-frame Intra-chr q22.33 Transcription factor q23 STE:STE7 Seq+ 51402 ChimerSeq STARFusion TCGA_RNA-Seq ARID1A-FUCA1 ARID1A chr1 27107683 + FUCA1 chr1 24172212 - Exonic hg19 STAD TCGA-CD-8527-01A 3 0 Out-of-frame Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 51403 ChimerSeq STARFusion TCGA_RNA-Seq ARPC1B-IPO9 ARPC1B chr7 98992403 + IPO9 chr1 201845883 + Exonic hg19 STAD TCGA-CD-8527-01A 3 0 Out-of-frame Inter-chr q22.1 q32.1 51404 ChimerSeq STARFusion TCGA_RNA-Seq GAREML-RAB10 GAREML chr2 26408145 + RAB10 chr2 26350013 + Exonic hg19 STAD TCGA-CD-8527-01A 3 0 Out-of-frame Intra-chr p23.3 51405 ChimerSeq STARFusion TCGA_RNA-Seq INO80D-MED11 INO80D chr2 206863165 - MED11 chr17 4636846 + Exonic hg19 STAD TCGA-CD-8527-01A 3 0 Out-of-frame Inter-chr p13.2 51406 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K3-KRT8 MAP3K3 chr17 61771724 + KRT8 chr12 53291405 - Exonic hg19 STAD TCGA-CD-8527-01A 3 0 Out-of-frame Inter-chr q23.3 STE:STE11 q13.13 51407 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R12C-ZNF787 PPP1R12C chr19 55610152 - ZNF787 chr19 56614596 - Exonic hg19 STAD TCGA-CD-8527-01A 3 0 CDS-5'UTR Intra-chr q13.42 q13.43 Transcription factor 51408 ChimerSeq STARFusion TCGA_RNA-Seq TPM4-GABARAP TPM4 chr19 16212707 + GABARAP chr17 7144123 - Exonic hg19 STAD TCGA-CD-8527-01A 3 0 Out-of-frame Inter-chr p13.12 p13.1 Tumor suppressor gene 51409 ChimerSeq STARFusion TCGA_RNA-Seq TRAM1-ERN2 TRAM1 chr8 71485705 - ERN2 chr16 23701662 - Exonic hg19 STAD TCGA-CD-8527-01A 3 0 Out-of-frame Inter-chr q13.3 p12.2 51410 ChimerSeq STARFusion TCGA_RNA-Seq UBE2S-NCOR2 UBE2S chr19 55919088 - NCOR2 chr12 124819829 - Exonic hg19 STAD TCGA-CD-8527-01A 3 0 Out-of-frame Inter-chr q13.42 q24.31 51411 ChimerSeq STARFusion TCGA_RNA-Seq SMAD3-MAP2K5 SMAD3 chr15 67358698 + MAP2K5 chr15 67984817 + Exonic hg19 STAD TCGA-CD-8527-01A 2 2 Out-of-frame Intra-chr q22.33 Transcription factor q23 STE:STE7 Seq+ 51412 ChimerSeq STARFusion TCGA_RNA-Seq AGRN-RPL12 AGRN chr1 957842 + RPL12 chr9 130210702 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 In-Frame Inter-chr p36.33 q33.3 51413 ChimerSeq STARFusion TCGA_RNA-Seq ANK3-FOCAD ANK3 chr10 62332223 - FOCAD chr9 20819795 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 In-Frame Inter-chr q21.2 p21.3 51414 ChimerSeq STARFusion TCGA_RNA-Seq ARFIP1-FBXW7 ARFIP1 chr4 153701378 + FBXW7 chr4 153271276 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 5'UTR-CDS Intra-chr q31.3 q31.3 Oncogene Tumor suppressor gene 51415 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP5-NUMB ARHGAP5 chr14 32563592 + NUMB chr14 73822474 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 CDS-5'UTR Intra-chr q12 q24.3 Tumor suppressor gene 51416 ChimerSeq STARFusion TCGA_RNA-Seq ASB3-MED13L ASB3 chr2 53927408 - MED13L chr12 116534557 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 In-Frame Inter-chr p16.2 q24.21 51417 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V0E2-PPP2R5C ATP6V0E2 chr7 149572734 + PPP2R5C chr14 102229242 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 Out-of-frame Inter-chr q36.1 q32.31 Tumor suppressor gene Seq+ 51418 ChimerSeq STARFusion TCGA_RNA-Seq BAIAP2L1-HSD17B14 BAIAP2L1 chr7 98030114 - HSD17B14 chr19 49318398 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 In-Frame Inter-chr q22.1 q13.33 51419 ChimerSeq STARFusion TCGA_RNA-Seq C20orf24-PHF20 C20orf24 chr20 35234468 + PHF20 chr20 34430495 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 Out-of-frame Intra-chr q11.23 q11.22 Transcription factor 51420 ChimerSeq STARFusion TCGA_RNA-Seq C4orf29-SRP72 C4orf29 chr4 128951827 + SRP72 chr4 57361523 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 Out-of-frame Intra-chr q12 51421 ChimerSeq STARFusion TCGA_RNA-Seq CCND3-CAPZB CCND3 chr6 42016239 - CAPZB chr1 19671746 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 5'UTR-CDS Inter-chr p21.1 p36.13 51422 ChimerSeq STARFusion TCGA_RNA-Seq CD2AP-RABGAP1 CD2AP chr6 47471176 + RABGAP1 chr9 125827627 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 In-Frame Inter-chr p12.3 q33.2 51423 ChimerSeq STARFusion TCGA_RNA-Seq CPSF1-ACY1 CPSF1 chr8 145634399 - ACY1 chr3 52022782 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 Out-of-frame Inter-chr q24.3 p21.2 Tumor suppressor gene Seq+ 51424 ChimerSeq STARFusion TCGA_RNA-Seq CREBRF-NRDE2 CREBRF chr5 172483482 + NRDE2 chr14 90752836 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 Out-of-frame Inter-chr q35.1 q32.11 51425 ChimerSeq STARFusion TCGA_RNA-Seq CTBP2-BIRC2 CTBP2 chr10 126776760 - BIRC2 chr11 102221575 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 5'UTR-5'UTR Inter-chr q26.13 q22.2 Oncogene 51426 ChimerSeq STARFusion TCGA_RNA-Seq DAZAP1-C19orf24 DAZAP1 chr19 1407801 + C19orf24 chr19 1277182 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 In-Frame Intra-chr p13.3 p13.3 51427 ChimerSeq STARFusion TCGA_RNA-Seq EMID1-EEF1D EMID1 chr22 29602128 + EEF1D chr8 144669022 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 In-Frame Inter-chr q12.2 51428 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-SKIL GAS6 chr13 114566548 - SKIL chr3 170077487 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 CDS-5'UTR Inter-chr q34 Oncogene q26.2 Tumor suppressor gene Transcription factor 51429 ChimerSeq STARFusion TCGA_RNA-Seq GUSBP1-TFAP4 GUSBP1 chr5 21461975 + TFAP4 chr16 4318082 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 5'UTR-CDS Inter-chr p14.3 p13.3 Transcription factor 51430 ChimerSeq STARFusion TCGA_RNA-Seq HELZ2-INF2 HELZ2 chr20 62201857 - INF2 chr14 105173247 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 Out-of-frame Inter-chr q13.33 q32.33 51431 ChimerSeq STARFusion TCGA_RNA-Seq IMPAD1-ESRP1 IMPAD1 chr8 57890609 - ESRP1 chr8 95704905 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 Out-of-frame Intra-chr q12.1 q22.1 Tumor suppressor gene 51432 ChimerSeq STARFusion TCGA_RNA-Seq LGR6-RNPEP LGR6 chr1 202163329 + RNPEP chr1 201958032 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 51433 ChimerSeq STARFusion TCGA_RNA-Seq LINC00482-ZCCHC7 LINC00482 chr17 79282985 - ZCCHC7 chr9 37327796 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 3'UTR-CDS Inter-chr q25.3 p13.2 51434 ChimerSeq STARFusion TCGA_RNA-Seq MICU1-MCU MICU1 chr10 74293504 - MCU chr10 74594117 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 In-Frame Intra-chr q22.1 q22.1 51435 ChimerSeq STARFusion TCGA_RNA-Seq MYL6-EML1 MYL6 chr12 56553406 + EML1 chr14 100402366 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 In-Frame Inter-chr q13.2 q32.2 51436 ChimerSeq STARFusion TCGA_RNA-Seq NDUFB2-KLC1 NDUFB2 chr7 140396642 + KLC1 chr14 104166992 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 In-Frame Inter-chr q34 q32.33 51437 ChimerSeq STARFusion TCGA_RNA-Seq NPHP1-RPL31 NPHP1 chr2 110962477 - RPL31 chr2 101622421 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 Out-of-frame Intra-chr q13 q11.2 51438 ChimerSeq STARFusion TCGA_RNA-Seq PEAK1-SH3PXD2A PEAK1 chr15 77712348 - SH3PXD2A chr10 105420872 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 5'UTR-CDS Inter-chr q24.3 q24.33 51439 ChimerSeq STARFusion TCGA_RNA-Seq PET100-THAP4 PET100 chr19 7694746 + THAP4 chr2 242545888 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 Out-of-frame Inter-chr p13.2 q37.3 Transcription factor 51440 ChimerSeq STARFusion TCGA_RNA-Seq PHYH-ZNF148 PHYH chr10 13322976 - ZNF148 chr3 124951498 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 In-Frame Inter-chr p13 q21.2 Transcription factor 51441 ChimerSeq STARFusion TCGA_RNA-Seq PLAG1-CPNE3 PLAG1 chr8 57123680 - CPNE3 chr8 87549791 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 5'UTR-CDS Intra-chr q12.1 Oncogene Transcription factor q21.3 51442 ChimerSeq STARFusion TCGA_RNA-Seq POLD3-RNF169 POLD3 chr11 74347320 + RNF169 chr11 74500671 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 In-Frame Intra-chr q13.4 q13.4 Seq+ 51443 ChimerSeq STARFusion TCGA_RNA-Seq PON3-TAX1BP1 PON3 chr7 95001485 - TAX1BP1 chr7 27867357 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 Out-of-frame Intra-chr q21.3 p15.2 51444 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R12C-PNPLA7 PPP1R12C chr19 55610152 - PNPLA7 chr9 140358908 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 In-Frame Inter-chr q13.42 q34.3 51445 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-PIEZO1 PUM1 chr1 31479841 - PIEZO1 chr16 88815887 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 In-Frame Inter-chr p35.2 q24.3 51446 ChimerSeq STARFusion TCGA_RNA-Seq RAB3GAP1-STK35 RAB3GAP1 chr2 135815656 + STK35 chr20 2083414 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 In-Frame Inter-chr q21.3 p13 51447 ChimerSeq STARFusion TCGA_RNA-Seq RBBP8-C18orf32 RBBP8 chr18 20586395 + C18orf32 chr18 47010141 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 CDS-5'UTR Intra-chr q11.2 Tumor suppressor gene q21.1 51448 ChimerSeq STARFusion TCGA_RNA-Seq RBM10-RNF41 RBM10 chrX 47006897 + RNF41 chr12 56610397 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 CDS-5'UTR Inter-chr p11.3 q13.3 51449 ChimerSeq STARFusion TCGA_RNA-Seq RBM47-UBE2K RBM47 chr4 40631413 - UBE2K chr4 39739040 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 5'UTR-CDS Intra-chr p14 p14 51450 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-HSD17B14 RCC1 chr1 28834672 + HSD17B14 chr19 49318398 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 5'UTR-CDS Inter-chr p35.3 q13.33 51451 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-POLE2 RCC1 chr1 28832596 + POLE2 chr14 50141145 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 5'UTR-CDS Inter-chr p35.3 q21.3 Seq+ 51452 ChimerSeq STARFusion TCGA_RNA-Seq RMI1-CASC1 RMI1 chr9 86595806 + CASC1 chr12 25267804 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 5'UTR-CDS Inter-chr q21.32 p12.1 Tumor suppressor gene 51453 ChimerSeq STARFusion TCGA_RNA-Seq SAR1A-RGS10 SAR1A chr10 71930169 - RGS10 chr10 121275164 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 5'UTR-CDS Intra-chr q22.1 q26.11 51454 ChimerSeq STARFusion TCGA_RNA-Seq SENP6-SMAP1 SENP6 chr6 76312292 + SMAP1 chr6 71442081 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 In-Frame Intra-chr q14.1 q13 51455 ChimerSeq STARFusion TCGA_RNA-Seq SHANK2-RAI2 SHANK2 chr11 70505933 - RAI2 chrX 17820154 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 CDS-5'UTR Inter-chr q13.4 p22.13 51456 ChimerSeq STARFusion TCGA_RNA-Seq SLC35A1-FUS SLC35A1 chr6 88182737 + FUS chr16 31199646 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 In-Frame Inter-chr q15 p11.2 Tumor suppressor gene 51457 ChimerSeq STARFusion TCGA_RNA-Seq SLC35A1-ORC3 SLC35A1 chr6 88182737 + ORC3 chr6 88362834 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 Out-of-frame Intra-chr q15 q15 51458 ChimerSeq STARFusion TCGA_RNA-Seq SLC35A2-RPL37A SLC35A2 chrX 48763669 - RPL37A chr2 217363993 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 In-Frame Inter-chr p11.23 q35 51459 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-HSD17B14 SNHG3 chr1 28834672 + HSD17B14 chr19 49318398 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 5'UTR-CDS Inter-chr p35.3 q13.33 51460 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-POLE2 SNHG3 chr1 28832596 + POLE2 chr14 50141145 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 5'UTR-CDS Inter-chr p35.3 q21.3 51461 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-CDK16 TBL1XR1 chr3 176914909 - CDK16 chrX 47081660 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 5'UTR-5'UTR Inter-chr q26.32 p11.3 51462 ChimerSeq STARFusion TCGA_RNA-Seq THAP3-NOL9 THAP3 chr1 6685352 + NOL9 chr1 6586063 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 Out-of-frame Intra-chr p36.31 Transcription factor p36.31 51463 ChimerSeq STARFusion TCGA_RNA-Seq TMED9-SBF1 TMED9 chr5 177020776 + SBF1 chr22 50906352 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 In-Frame Inter-chr q35.3 q13.33 51464 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-TMEM11 TMPRSS2 chr21 42880008 - TMEM11 chr17 21111852 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 5'UTR-CDS Inter-chr q22.3 p11.2 51465 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN3-FARSB TSPAN3 chr15 77363234 - FARSB chr2 223436741 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 Out-of-frame Inter-chr q24.3 q36.1 51466 ChimerSeq STARFusion TCGA_RNA-Seq UBR1-TP53BP1 UBR1 chr15 43367177 - TP53BP1 chr15 43701939 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 Out-of-frame Intra-chr q15.2 q15.3 Tumor suppressor gene 51467 ChimerSeq STARFusion TCGA_RNA-Seq WDR81-S100PBP WDR81 chr17 1620008 + S100PBP chr1 33290914 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 5'UTR-5'UTR Inter-chr p35.1 51468 ChimerSeq STARFusion TCGA_RNA-Seq ZKSCAN1-BAIAP2L1 ZKSCAN1 chr7 99613349 + BAIAP2L1 chr7 97923423 - Exonic hg19 STAD TCGA-CD-8527-01A 2 0 5'UTR-CDS Intra-chr q22.1 Transcription factor q22.1 51469 ChimerSeq STARFusion TCGA_RNA-Seq ZNF91-CLCN5 ZNF91 chr19 23578127 - CLCN5 chrX 49806925 + Exonic hg19 STAD TCGA-CD-8527-01A 2 0 Out-of-frame Inter-chr p12 Transcription factor p11.23 51470 ChimerSeq STARFusion TCGA_RNA-Seq SEMA4B-CIB2 SEMA4B chr15 90728313 + CIB2 chr15 78403618 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 429 85 5'UTR-CDS Intra-chr q26.1 q25.1 Seq+ 51471 ChimerSeq STARFusion TCGA_RNA-Seq RAD21-EIF3H RAD21 chr8 117868405 - EIF3H chr8 117671219 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 370 56 In-Frame Intra-chr q24.11 q24.11 Seq+ 51472 ChimerSeq STARFusion TCGA_RNA-Seq GPR56-BCAR4 GPR56 chr16 57654048 + BCAR4 chr16 11914154 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 182 48 5'UTR-3'UTR Intra-chr q21 p13.13 Seq+ 51473 ChimerSeq STARFusion TCGA_RNA-Seq EPHA2-FBXO42 EPHA2 chr1 16474873 - FBXO42 chr1 16583254 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 127 21 In-Frame Intra-chr p36.13 Tumor suppressor gene p36.13 Seq+ 51474 ChimerSeq STARFusion TCGA_RNA-Seq GPR56-BCAR4 GPR56 chr16 57653793 + BCAR4 chr16 11914154 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 93 48 5'UTR-3'UTR Intra-chr q21 p13.13 Seq+ 51475 ChimerSeq STARFusion TCGA_RNA-Seq ERBB3-IKZF4 ERBB3 chr12 56493531 + IKZF4 chr12 56421668 + Exonic hg19 STAD TCGA-VQ-AA6D-01A 89 16 Out-of-frame Intra-chr q13.2 Oncogene q13.2 Transcription factor Seq+ 51476 ChimerSeq STARFusion TCGA_RNA-Seq NCOA6-GGT7 NCOA6 chr20 33413275 - GGT7 chr20 33440341 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 69 14 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 51477 ChimerSeq STARFusion TCGA_RNA-Seq GPR56-BCAR4 GPR56 chr16 57654048 + BCAR4 chr16 11915612 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 54 48 5'UTR-3'UTR Intra-chr q21 p13.13 Seq+ 51478 ChimerSeq STARFusion TCGA_RNA-Seq BAZ2A-NACA BAZ2A chr12 57024560 - NACA chr12 57118307 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 56 18 CDS-5'UTR Intra-chr q13.3 Transcription factor q13.3 Seq+ 51479 ChimerSeq STARFusion TCGA_RNA-Seq STK24-DOCK9 STK24 chr13 99171497 - DOCK9 chr13 99532926 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 47 18 In-Frame Intra-chr q32.2 q32.3 Seq+ 51480 ChimerSeq STARFusion TCGA_RNA-Seq BAZ2A-NACA BAZ2A chr12 57023909 - NACA chr12 57118307 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 41 13 CDS-5'UTR Intra-chr q13.3 Transcription factor q13.3 Seq+ 51481 ChimerSeq STARFusion TCGA_RNA-Seq FEM1B-HMGN2P40 FEM1B chr15 68571003 + HMGN2P40 chr15 68546886 + Exonic hg19 STAD TCGA-VQ-AA6D-01A 41 3 Out-of-frame Intra-chr q23 q23 51482 ChimerSeq STARFusion TCGA_RNA-Seq SLC5A1-YWHAH SLC5A1 chr22 32446001 + YWHAH chr22 32352126 + Exonic hg19 STAD TCGA-VQ-AA6D-01A 32 7 In-Frame Intra-chr q12.3 q12.3 Seq+ 51483 ChimerSeq STARFusion TCGA_RNA-Seq USP48-WNT4 USP48 chr1 22041882 - WNT4 chr1 22456344 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 30 5 Out-of-frame Intra-chr p36.12 p36.12 Seq+ 51484 ChimerSeq STARFusion TCGA_RNA-Seq BAZ2A-NACA BAZ2A chr12 57023909 - NACA chr12 57119237 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 27 13 Out-of-frame Intra-chr q13.3 Transcription factor q13.3 Seq+ 51485 ChimerSeq STARFusion TCGA_RNA-Seq ECHDC1-KIAA0408 ECHDC1 chr6 127664481 - KIAA0408 chr6 127765427 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 28 2 5'UTR-CDS Intra-chr q22.33 q22.33 51486 ChimerSeq STARFusion TCGA_RNA-Seq ECHDC1-SOGA3 ECHDC1 chr6 127664481 - SOGA3 chr6 127765427 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 28 2 5'UTR-3'UTR Intra-chr q22.33 q22.33 51487 ChimerSeq STARFusion TCGA_RNA-Seq ECHDC1-SOGA3 ECHDC1 chr6 127664481 - SOGA3 chr6 127765427 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 28 2 5'UTR-3'UTR Intra-chr q22.33 q22.33 51488 ChimerSeq STARFusion TCGA_RNA-Seq ECT2-SPATA16 ECT2 chr3 172520770 + SPATA16 chr3 172766884 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 28 0 In-Frame Intra-chr q26.31 Tumor suppressor gene q26.31 Seq+ 51489 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC8-ZNF3 DNAJC8 chr1 28559432 - ZNF3 chr7 99675056 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 23 15 CDS-5'UTR Inter-chr p35.3 q22.1 Transcription factor Seq+ 51490 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142481912 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 26 0 3'UTR-CDS Inter-chr q13.41 51491 ChimerSeq STARFusion TCGA_RNA-Seq PTGES2-CIZ1 PTGES2 chr9 130890527 - CIZ1 chr9 130940042 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 24 7 5'UTR-CDS Intra-chr q34.11 q34.11 Tumor suppressor gene Seq+ 51492 ChimerSeq STARFusion TCGA_RNA-Seq CORO1B-TMEM134 CORO1B chr11 67210875 - TMEM134 chr11 67235563 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 24 4 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 51493 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142460418 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 25 0 In-Frame Inter-chr q13.41 51494 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L1-CDK5RAP3 NFE2L1 chr17 46126226 + CDK5RAP3 chr17 46050885 + Exonic hg19 STAD TCGA-VQ-AA6D-01A 20 13 5'UTR-CDS Intra-chr q21.32 Transcription factor q21.32 Seq+ 51495 ChimerSeq STARFusion TCGA_RNA-Seq TIMP2-RBFOX3 TIMP2 chr17 76921041 - RBFOX3 chr17 77093827 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 22 2 In-Frame Intra-chr q25.3 q25.3 Seq+ 51496 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK6 PRSS1 chr7 142481912 + KLK6 chr19 51462572 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 22 0 3'UTR-CDS Inter-chr q13.41 Tumor suppressor gene 51497 ChimerSeq STARFusion TCGA_RNA-Seq BAZ2A-NACA BAZ2A chr12 57023909 - NACA chr12 57119124 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 18 13 Out-of-frame Intra-chr q13.3 Transcription factor q13.3 Seq+ 51498 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L1-CDK5RAP3 NFE2L1 chr17 46125824 + CDK5RAP3 chr17 46050885 + Exonic hg19 STAD TCGA-VQ-AA6D-01A 18 13 5'UTR-CDS Intra-chr q21.32 Transcription factor q21.32 Seq+ 51499 ChimerSeq STARFusion TCGA_RNA-Seq ATR-R3HDM2 ATR chr3 142284963 - R3HDM2 chr12 57650294 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 16 5 3'UTR-CDS Inter-chr q23 Atypical:PIKK Oncogene Tumor suppressor gene q13.3 Seq+ 51500 ChimerSeq STARFusion TCGA_RNA-Seq BAZ2A-NACA BAZ2A chr12 57023909 - NACA chr12 57108471 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 14 13 CDS-3'UTR Intra-chr q13.3 Transcription factor q13.3 Seq+ 51501 ChimerSeq STARFusion TCGA_RNA-Seq BAD-TRMT112 BAD chr11 64051654 - TRMT112 chr11 64084837 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 15 5 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 51502 ChimerSeq STARFusion TCGA_RNA-Seq SMAD3-IQCH SMAD3 chr15 67358698 + IQCH chr15 67664449 + Exonic hg19 STAD TCGA-VQ-AA6D-01A 15 2 Out-of-frame Intra-chr q22.33 Transcription factor q23 51503 ChimerSeq STARFusion TCGA_RNA-Seq TCF20-CYB5R3 TCF20 chr22 42739485 - CYB5R3 chr22 43032852 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 15 1 5'UTR-5'UTR Intra-chr Transcription factor q13.2 51504 ChimerSeq STARFusion TCGA_RNA-Seq STAT3-PTRF STAT3 chr17 40540297 - PTRF chr17 40557406 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 14 2 5'UTR-CDS Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor 51505 ChimerSeq STARFusion TCGA_RNA-Seq HKDC1-SUPV3L1 HKDC1 chr10 71010408 + SUPV3L1 chr10 70951411 + Exonic hg19 STAD TCGA-VQ-AA6D-01A 13 3 In-Frame Intra-chr q22.1 q22.1 Seq+ 51506 ChimerSeq STARFusion TCGA_RNA-Seq MYO15B-LLGL2 MYO15B chr17 73608097 + LLGL2 chr17 73554213 + Exonic hg19 STAD TCGA-VQ-AA6D-01A 13 1 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 51507 ChimerSeq STARFusion TCGA_RNA-Seq ECHDC1-KIAA0408 ECHDC1 chr6 127664106 - KIAA0408 chr6 127765427 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 12 2 5'UTR-CDS Intra-chr q22.33 q22.33 51508 ChimerSeq STARFusion TCGA_RNA-Seq ECHDC1-SOGA3 ECHDC1 chr6 127664106 - SOGA3 chr6 127765427 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 12 2 5'UTR-3'UTR Intra-chr q22.33 q22.33 51509 ChimerSeq STARFusion TCGA_RNA-Seq ECHDC1-SOGA3 ECHDC1 chr6 127664106 - SOGA3 chr6 127765427 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 12 2 5'UTR-3'UTR Intra-chr q22.33 q22.33 51510 ChimerSeq STARFusion TCGA_RNA-Seq BAZ2A-NACA BAZ2A chr12 57024560 - NACA chr12 57119237 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 9 13 Out-of-frame Intra-chr q13.3 Transcription factor q13.3 Seq+ 51511 ChimerSeq STARFusion TCGA_RNA-Seq PIM3-FRMD8 PIM3 chr22 50356476 + FRMD8 chr11 65180767 + Exonic hg19 STAD TCGA-VQ-AA6D-01A 12 1 Out-of-frame Inter-chr q13.33 CAMK:PIM q13.1 Seq+ 51512 ChimerSeq STARFusion TCGA_RNA-Seq FOXK2-NARF FOXK2 chr17 80478183 + NARF chr17 80441592 + Exonic hg19 STAD TCGA-VQ-AA6D-01A 11 4 Out-of-frame Intra-chr q25.3 Transcription factor q25.3 Seq+ 51513 ChimerSeq STARFusion TCGA_RNA-Seq SMPDL3A-FABP7 SMPDL3A chr6 123110603 + FABP7 chr6 123101436 + Exonic hg19 STAD TCGA-VQ-AA6D-01A 11 3 In-Frame Intra-chr q22.31 q22.31 Seq+ 51514 ChimerSeq STARFusion TCGA_RNA-Seq GATSL2-GTF2IRD2 GATSL2 chr7 74867229 - GTF2IRD2 chr7 74251505 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 11 1 CDS-5'UTR Intra-chr q11.23 Transcription factor 51515 ChimerSeq STARFusion TCGA_RNA-Seq TET2-ARHGEF38 TET2 chr4 106111662 + ARHGEF38 chr4 106510405 + Exonic hg19 STAD TCGA-VQ-AA6D-01A 10 5 5'UTR-CDS Intra-chr q24 Oncogene Tumor suppressor gene Transcription factor q24 Seq+ 51516 ChimerSeq STARFusion TCGA_RNA-Seq TRAIP-ACTBP13 TRAIP chr3 49884958 - ACTBP13 chr3 49913704 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 11 0 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 51517 ChimerSeq STARFusion TCGA_RNA-Seq PTGES2-CIZ1 PTGES2 chr9 130890334 - CIZ1 chr9 130940042 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 9 7 5'UTR-CDS Intra-chr q34.11 q34.11 Tumor suppressor gene Seq+ 51518 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL2-TNFAIP2 RN7SL2 chr14 50329518 - TNFAIP2 chr14 103602903 + Exonic hg19 STAD TCGA-VQ-AA6D-01A 10 0 Out-of-frame Intra-chr q21.3 q32.32 51519 ChimerSeq STARFusion TCGA_RNA-Seq PTGES2-CIZ1 PTGES2 chr9 130890342 - CIZ1 chr9 130940042 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 8 7 5'UTR-CDS Intra-chr q34.11 q34.11 Tumor suppressor gene Seq+ 51520 ChimerSeq STARFusion TCGA_RNA-Seq BAZ2A-NACA BAZ2A chr12 57024560 - NACA chr12 57119124 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 6 13 Out-of-frame Intra-chr q13.3 Transcription factor q13.3 Seq+ 51521 ChimerSeq STARFusion TCGA_RNA-Seq BAZ2A-NACA BAZ2A chr12 57024560 - NACA chr12 57108471 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 6 13 CDS-3'UTR Intra-chr q13.3 Transcription factor q13.3 Seq+ 51522 ChimerSeq STARFusion TCGA_RNA-Seq DOK7-RGS12 DOK7 chr4 3465278 + RGS12 chr4 3417705 + Exonic hg19 STAD TCGA-VQ-AA6D-01A 9 1 Out-of-frame Intra-chr p16.3 p16.3 51523 ChimerSeq STARFusion TCGA_RNA-Seq FOXK2-NARF FOXK2 chr17 80478183 + NARF chr17 80443373 + Exonic hg19 STAD TCGA-VQ-AA6D-01A 8 4 In-Frame Intra-chr q25.3 Transcription factor q25.3 Seq+ 51524 ChimerSeq STARFusion TCGA_RNA-Seq DCAF7-ACE DCAF7 chr17 61628176 + ACE chr17 61584417 + Exonic hg19 STAD TCGA-VQ-AA6D-01A 7 4 CDS-3'UTR Intra-chr q23.3 q23.3 51525 ChimerSeq STARFusion TCGA_RNA-Seq DCAF7-ACE DCAF7 chr17 61628176 + ACE chr17 61584417 + Exonic hg19 STAD TCGA-VQ-AA6D-01A 7 4 CDS-3'UTR Intra-chr q23.3 q23.3 51526 ChimerSeq STARFusion TCGA_RNA-Seq BAD-TRMT112 BAD chr11 64051654 - TRMT112 chr11 64085144 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 6 5 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 51527 ChimerSeq STARFusion TCGA_RNA-Seq DCAF7-ACE DCAF7 chr17 61628176 + ACE chr17 61584602 + Exonic hg19 STAD TCGA-VQ-AA6D-01A 6 4 CDS-3'UTR Intra-chr q23.3 q23.3 51528 ChimerSeq STARFusion TCGA_RNA-Seq DCAF7-ACE DCAF7 chr17 61628176 + ACE chr17 61584602 + Exonic hg19 STAD TCGA-VQ-AA6D-01A 6 4 CDS-3'UTR Intra-chr q23.3 q23.3 51529 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-CEACAM5 LYZ chr12 69747259 + CEACAM5 chr19 42233371 + Exonic hg19 STAD TCGA-VQ-AA6D-01A 6 4 Out-of-frame Inter-chr q15 q13.2 51530 ChimerSeq STARFusion TCGA_RNA-Seq BAD-TRMT112 BAD chr11 64051654 - TRMT112 chr11 64085279 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 5 5 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 51531 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-NKAIN1 PUM1 chr1 31447498 - NKAIN1 chr1 31661034 - Exonic hg19 STAD TCGA-D7-6527-01A 199 5 In-Frame Intra-chr p35.2 p35.2 Seq+ 51532 ChimerSeq STARFusion TCGA_RNA-Seq PDCD6IP-GADL1 PDCD6IP chr3 33870461 + GADL1 chr3 30769907 - Exonic hg19 STAD TCGA-D7-6527-01A 125 1 In-Frame Intra-chr p22.3 p23 Seq+ 51533 ChimerSeq STARFusion TCGA_RNA-Seq POLR2J2-DNAJC2 POLR2J2 chr7 102311999 - DNAJC2 chr7 102965009 - Exonic hg19 STAD TCGA-D7-6527-01A 112 1 In-Frame Intra-chr q22.1 q22.1 51534 ChimerSeq STARFusion TCGA_RNA-Seq POLR2J2-DNAJC2 POLR2J2 chr7 102311999 - DNAJC2 chr7 102965009 - Exonic hg19 STAD TCGA-D7-6527-01A 112 1 In-Frame Intra-chr q22.1 q22.1 51535 ChimerSeq STARFusion TCGA_RNA-Seq CLK1-ORC2 CLK1 chr2 201729287 - ORC2 chr2 201778715 - Exonic hg19 STAD TCGA-D7-6527-01A 93 0 5'UTR-CDS Intra-chr q33.1 CMGC:CLK q33.1 Seq+ 51536 ChimerSeq STARFusion TCGA_RNA-Seq TAF15-PDK3 TAF15 chr17 34136580 + PDK3 chrX 24549774 + Exonic hg19 STAD TCGA-D7-6527-01A 57 0 Out-of-frame Inter-chr q12 p22.11 Seq+ 51537 ChimerSeq STARFusion TCGA_RNA-Seq UBP1-EIF3K UBP1 chr3 33481228 - EIF3K chr19 39110977 + Exonic hg19 STAD TCGA-D7-6527-01A 52 1 In-Frame Inter-chr p22.3 Transcription factor Seq+ 51538 ChimerSeq STARFusion TCGA_RNA-Seq PPARGC1B-TCOF1 PPARGC1B chr5 149109983 + TCOF1 chr5 149740719 + Exonic hg19 STAD TCGA-D7-6527-01A 45 1 In-Frame Intra-chr q32 q32 Seq+ 51539 ChimerSeq STARFusion TCGA_RNA-Seq PGC-SCN8A PGC chr6 41708229 - SCN8A chr12 52115641 + Exonic hg19 STAD TCGA-D7-6527-01A 34 0 Out-of-frame Inter-chr p21.1 q13.13 51540 ChimerSeq STARFusion TCGA_RNA-Seq PAF1-YWHAG PAF1 chr19 39880709 - YWHAG chr7 75988141 - Exonic hg19 STAD TCGA-D7-6527-01A 33 0 CDS-5'UTR Inter-chr q13.2 q11.23 Seq+ 51541 ChimerSeq STARFusion TCGA_RNA-Seq TSHZ2-NSUN5P1 TSHZ2 chr20 52103871 + NSUN5P1 chr7 75044398 + Exonic hg19 STAD TCGA-D7-6527-01A 28 0 3'UTR-5'UTR Inter-chr q13.2 Transcription factor q11.23 51542 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1A1-MYO15B CSNK1A1 chr5 148929638 - MYO15B chr17 73606247 + Exonic hg19 STAD TCGA-D7-6527-01A 27 1 CDS-5'UTR Inter-chr q32 Tumor suppressor gene q25.1 Seq+ 51543 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC2-ZNF385D DNAJC2 chr7 102978183 - ZNF385D chr3 21706520 - Exonic hg19 STAD TCGA-D7-6527-01A 26 1 In-Frame Inter-chr q22.1 p24.3 Transcription factor Seq+ 51544 ChimerSeq STARFusion TCGA_RNA-Seq PTPRN2-DNAJC2 PTPRN2 chr7 158380250 - DNAJC2 chr7 102953548 - Exonic hg19 STAD TCGA-D7-6527-01A 24 1 In-Frame Intra-chr q36.3 q22.1 Seq+ 51545 ChimerSeq STARFusion TCGA_RNA-Seq NCAPG2-ORC5 NCAPG2 chr7 158497415 - ORC5 chr7 103777340 - Exonic hg19 STAD TCGA-D7-6527-01A 24 0 5'UTR-CDS Intra-chr q36.3 q22.2 Seq+ 51546 ChimerSeq STARFusion TCGA_RNA-Seq MYRIP-BABAM1 MYRIP chr3 39851407 + BABAM1 chr19 17384713 + Exonic hg19 STAD TCGA-D7-6527-01A 21 0 5'UTR-CDS Inter-chr p22.1 p13.11 Seq+ 51547 ChimerSeq STARFusion TCGA_RNA-Seq SNX6-BAZ1A SNX6 chr14 35062251 - BAZ1A chr14 35243696 - Exonic hg19 STAD TCGA-D7-6527-01A 21 0 In-Frame Intra-chr q13.1 q13.2 Seq+ 51548 ChimerSeq STARFusion TCGA_RNA-Seq UBP1-EIF3K UBP1 chr3 33481228 - EIF3K chr19 39109786 + Exonic hg19 STAD TCGA-D7-6527-01A 20 1 CDS-5'UTR Inter-chr p22.3 Transcription factor Seq+ 51549 ChimerSeq STARFusion TCGA_RNA-Seq PNPLA7-EXD3 PNPLA7 chr9 140391639 - EXD3 chr9 140218595 - Exonic hg19 STAD TCGA-D7-6527-01A 20 0 In-Frame Intra-chr q34.3 q34.3 Seq+ 51550 ChimerSeq STARFusion TCGA_RNA-Seq POLR2J2-DNAJC2 POLR2J2 chr7 102212919 - DNAJC2 chr7 102965009 - Exonic hg19 STAD TCGA-D7-6527-01A 19 1 3'UTR-CDS Intra-chr q22.1 q22.1 51551 ChimerSeq STARFusion TCGA_RNA-Seq CMTM8-DPY19L2P2 CMTM8 chr3 32280611 + DPY19L2P2 chr7 102874333 - Exonic hg19 STAD TCGA-D7-6527-01A 19 0 CDS-3'UTR Inter-chr p22.3 51552 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL1-IFI6 RN7SL1 chr14 50053530 + IFI6 chr1 27992763 - Exonic hg19 STAD TCGA-D7-6527-01A 13 0 Out-of-frame Inter-chr q21.3 p35.3 51553 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL1-SOD2 RN7SL1 chr14 50053470 + SOD2 chr6 160101937 - Exonic hg19 STAD TCGA-HU-8602-01A 3 11 Out-of-frame Inter-chr q21.3 q25.3 Tumor suppressor gene 51554 ChimerSeq STARFusion TCGA_RNA-Seq HDAC8-RPS4X HDAC8 chrX 71681854 - RPS4X chrX 71475904 - Exonic hg19 STAD TCGA-D7-A6EX-01A 38 8 CDS-3'UTR Intra-chr q13.1 q13.1 Seq+ 51555 ChimerSeq STARFusion TCGA_RNA-Seq ARID1A-TRNP1 ARID1A chr1 27024031 + TRNP1 chr1 27326338 + Exonic hg19 STAD TCGA-D7-A6EX-01A 27 6 CDS-3'UTR Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 51556 ChimerSeq STARFusion TCGA_RNA-Seq RPL13P12-PNMA2 RPL13P12 chr17 17286669 - PNMA2 chr8 26364477 - Exonic hg19 STAD TCGA-D7-A6EX-01A 26 0 Out-of-frame Inter-chr p21.2 51557 ChimerSeq STARFusion TCGA_RNA-Seq CDK6-SEMA3D CDK6 chr7 92404010 - SEMA3D chr7 84685175 - Exonic hg19 STAD TCGA-D7-A6EX-01A 16 1 Out-of-frame Intra-chr q21.2 CMGC:CDK Oncogene Tumor suppressor gene q21.11 Seq+ 51558 ChimerSeq STARFusion TCGA_RNA-Seq PCLO-CDK14 PCLO chr7 82595087 - CDK14 chr7 90376996 + Exonic hg19 STAD TCGA-D7-A6EX-01A 13 2 In-Frame Intra-chr q21.11 q21.13 Seq+ 51559 ChimerSeq STARFusion TCGA_RNA-Seq CDK14-DPY19L2P4 CDK14 chr7 90747523 + DPY19L2P4 chr7 89751381 + Exonic hg19 STAD TCGA-D7-A6EX-01A 8 4 3'UTR-5'UTR Intra-chr q21.13 q21.13 51560 ChimerSeq STARFusion TCGA_RNA-Seq BCKDHB-COQ3 BCKDHB chr6 80881107 + COQ3 chr6 99831700 - Exonic hg19 STAD TCGA-D7-A6EX-01A 5 6 In-Frame Intra-chr q14.1 q16.2 Seq+ 51561 ChimerSeq STARFusion TCGA_RNA-Seq TUBD1-RNFT1 TUBD1 chr17 57970058 - RNFT1 chr17 58040645 - Exonic hg19 STAD TCGA-CD-A4MJ-01A 21 0 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 51562 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL2-TNFAIP2 RN7SL2 chr14 50329518 - TNFAIP2 chr14 103602903 + Exonic hg19 STAD TCGA-CD-A4MJ-01A 16 0 Out-of-frame Intra-chr q21.3 q32.32 51563 ChimerSeq STARFusion TCGA_RNA-Seq ZKSCAN4-SLC44A4 ZKSCAN4 chr6 28215845 - SLC44A4 chr6 31833903 - Exonic hg19 STAD TCGA-D7-6815-01A 156 6 In-Frame Intra-chr p22.1 Transcription factor Seq+ 51564 ChimerSeq STARFusion TCGA_RNA-Seq LASP1-WIPF2 LASP1 chr17 37054772 + WIPF2 chr17 38412643 + Exonic hg19 STAD TCGA-D7-6815-01A 28 1 CDS-5'UTR Intra-chr q12 q21.2 Seq+ 51565 ChimerSeq STARFusion TCGA_RNA-Seq AATF-UBE2G1 AATF chr17 35311207 + UBE2G1 chr17 4210418 - Exonic hg19 STAD TCGA-D7-6815-01A 23 0 In-Frame Intra-chr p13.2 Seq+ 51566 ChimerSeq STARFusion TCGA_RNA-Seq ATN1-LRRC23 ATN1 chr12 7037547 + LRRC23 chr12 6991360 + Exonic hg19 STAD TCGA-D7-6815-01A 19 0 5'UTR-5'UTR Intra-chr p13.31 p13.31 Seq+ 51567 ChimerSeq STARFusion TCGA_RNA-Seq ATN1-RPL13P5 ATN1 chr12 7037547 + RPL13P5 chr12 6991360 + Exonic hg19 STAD TCGA-D7-6815-01A 19 0 5'UTR-5'UTR Intra-chr p13.31 p13.31 51568 ChimerSeq STARFusion TCGA_RNA-Seq MIR142-IGH@ MIR142 chr17 56409831 - IGH@ chr14 106054731 - Exonic hg19 STAD TCGA-D7-8574-01A 6 0 Out-of-frame Inter-chr q22 Tumor suppressor gene 32.33 51569 ChimerSeq STARFusion TCGA_RNA-Seq MIR142-IGHA2 MIR142 chr17 56409831 - IGHA2 chr14 106054731 - Exonic hg19 STAD TCGA-D7-8574-01A 6 0 Out-of-frame Inter-chr q22 Tumor suppressor gene 51570 ChimerSeq STARFusion TCGA_RNA-Seq APP-SYTL2 APP chr21 27484296 - SYTL2 chr11 85416071 - Exonic hg19 STAD TCGA-D7-8574-01A 3 0 In-Frame Inter-chr q21.3 q14.1 51571 ChimerSeq STARFusion TCGA_RNA-Seq ARL17A-KANSL1 ARL17A chr17 44634731 - KANSL1 chr17 44159908 - Exonic hg19 STAD TCGA-D7-8574-01A 3 0 Out-of-frame Intra-chr q21.31 Seq+ 51572 ChimerSeq STARFusion TCGA_RNA-Seq B2M-HNRNPA2B1 B2M chr15 45010256 + HNRNPA2B1 chr7 26232942 - Exonic hg19 STAD TCGA-D7-8574-01A 3 0 Out-of-frame Inter-chr Oncogene p15.2 51573 ChimerSeq STARFusion TCGA_RNA-Seq C20orf196-SMCHD1 C20orf196 chr20 5753689 + SMCHD1 chr18 2700537 + Exonic hg19 STAD TCGA-D7-8574-01A 3 0 In-Frame Inter-chr p12.3 p11.32 Tumor suppressor gene 51574 ChimerSeq STARFusion TCGA_RNA-Seq FARS2-REG1A FARS2 chr6 5368962 + REG1A chr2 79348758 + Exonic hg19 STAD TCGA-D7-8574-01A 3 0 Out-of-frame Inter-chr p25.1 p12 51575 ChimerSeq STARFusion TCGA_RNA-Seq GNAI2-SEMA3F GNAI2 chr3 50273885 + SEMA3F chr3 50197008 + Exonic hg19 STAD TCGA-D7-8574-01A 3 0 CDS-5'UTR Intra-chr p21.31 p21.31 Tumor suppressor gene 51576 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-snoU13 GNB1 chr1 1716739 - snoU13 chr5 149408918 - Exonic hg19 STAD TCGA-D7-8574-01A 3 0 Out-of-frame Inter-chr p36.33 51577 ChimerSeq STARFusion TCGA_RNA-Seq MARCH6-DDHD2 2019_ 3_ 6_ chr5 10414614 + DDHD2 chr8 38091912 + Exonic hg19 STAD TCGA-D7-8574-01A 3 0 Out-of-frame Inter-chr p15.2 p11.23 51578 ChimerSeq STARFusion TCGA_RNA-Seq PEAK1-ZMYND8 PEAK1 chr15 77712348 - ZMYND8 chr20 45916028 - Exonic hg19 STAD TCGA-D7-8574-01A 3 0 5'UTR-CDS Inter-chr q24.3 q13.12 51579 ChimerSeq STARFusion TCGA_RNA-Seq RER1-BGN RER1 chr1 2335082 + BGN chrX 152774494 + Exonic hg19 STAD TCGA-D7-8574-01A 3 0 Out-of-frame Inter-chr p36.32 q28 51580 ChimerSeq STARFusion TCGA_RNA-Seq SCARNA2-TGFB1 SCARNA2 chr1 109642861 + TGFB1 chr19 41859667 - Exonic hg19 STAD TCGA-D7-8574-01A 3 0 Out-of-frame Inter-chr p13.3 q13.2 Tumor suppressor gene 51581 ChimerSeq STARFusion TCGA_RNA-Seq SLC5A1-PIGR SLC5A1 chr22 32495342 + PIGR chr1 207119808 - Exonic hg19 STAD TCGA-D7-8574-01A 3 0 Out-of-frame Inter-chr q12.3 q32.1 Seq+ 51582 ChimerSeq STARFusion TCGA_RNA-Seq SYNPO-FYCO1 SYNPO chr5 150038155 + FYCO1 chr3 45962124 - Exonic hg19 STAD TCGA-D7-8574-01A 3 0 Out-of-frame Inter-chr q33.1 p21.31 51583 ChimerSeq STARFusion TCGA_RNA-Seq TRAF3IP1-S100A10 TRAF3IP1 chr2 239237888 + S100A10 chr1 151955556 - Exonic hg19 STAD TCGA-D7-8574-01A 3 0 Out-of-frame Inter-chr q37.3 q21.3 51584 ChimerSeq STARFusion TCGA_RNA-Seq TRIM27-ACOX1 TRIM27 chr6 28872335 - ACOX1 chr17 73949673 - Exonic hg19 STAD TCGA-D7-8574-01A 3 0 Out-of-frame Inter-chr q25.1 51585 ChimerSeq STARFusion TCGA_RNA-Seq TYMP-MIR650 TYMP chr22 50967018 - MIR650 chr22 23165273 + Exonic hg19 STAD TCGA-D7-8574-01A 3 0 Out-of-frame Intra-chr q13.33 q11.22 51586 ChimerSeq STARFusion TCGA_RNA-Seq CIRBP-MISP CIRBP chr19 1269409 + MISP chr19 756890 + Exonic hg19 STAD TCGA-D7-8574-01A 2 1 Out-of-frame Intra-chr p13.3 p13.3 51587 ChimerSeq STARFusion TCGA_RNA-Seq MINOS1-CAPZB MINOS1 chr1 19923603 + CAPZB chr1 19712120 - Exonic hg19 STAD TCGA-D7-8574-01A 2 1 Out-of-frame Intra-chr p36.13 p36.13 51588 ChimerSeq STARFusion TCGA_RNA-Seq SNX2-RAC1 SNX2 chr5 122110906 + RAC1 chr7 6439757 + Exonic hg19 STAD TCGA-D7-8574-01A 2 1 In-Frame Inter-chr q23.2 p22.1 Oncogene 51589 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD13A-ATP2A2 ANKRD13A chr12 110437589 + ATP2A2 chr12 110734404 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 In-Frame Intra-chr q24.11 q24.11 51590 ChimerSeq STARFusion TCGA_RNA-Seq CCDC91-STAT4 CCDC91 chr12 28544344 + STAT4 chr2 191905874 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 In-Frame Inter-chr p11.22 q32.3 Transcription factor 51591 ChimerSeq STARFusion TCGA_RNA-Seq CCDC97-TGFB1 CCDC97 chr19 41816261 + TGFB1 chr19 41838186 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Intra-chr q13.2 q13.2 Tumor suppressor gene 51592 ChimerSeq STARFusion TCGA_RNA-Seq CDC42BPB-PPP3CB CDC42BPB chr14 103432619 - PPP3CB chr10 75199659 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Inter-chr q32.32 q22.2 51593 ChimerSeq STARFusion TCGA_RNA-Seq CELF2-UBA1 CELF2 chr10 11207645 + UBA1 chrX 47058202 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 CDS-5'UTR Inter-chr p14 p11.3 51594 ChimerSeq STARFusion TCGA_RNA-Seq CHD1-SNX25 CHD1 chr5 98209297 - SNX25 chr4 186244682 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Inter-chr q21.1 Tumor suppressor gene q35.1 51595 ChimerSeq STARFusion TCGA_RNA-Seq COG5-FYB COG5 chr7 107052947 - FYB chr5 39110491 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Inter-chr p13.1 51596 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-CDK13 CPSF6 chr12 69656342 + CDK13 chr7 40027198 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 3'UTR-CDS Inter-chr q15 p14.1 51597 ChimerSeq STARFusion TCGA_RNA-Seq CYB5D2-ANKFY1 CYB5D2 chr17 4053325 + ANKFY1 chr17 4100872 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 In-Frame Intra-chr p13.2 p13.2 51598 ChimerSeq STARFusion TCGA_RNA-Seq DCBLD1-VWA9 DCBLD1 chr6 117806203 + VWA9 chr15 65888163 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Inter-chr q22.1 51599 ChimerSeq STARFusion TCGA_RNA-Seq FNBP1-RAC2 FNBP1 chr9 132805231 - RAC2 chr22 37622843 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Inter-chr q34.11 q13.1 51600 ChimerSeq STARFusion TCGA_RNA-Seq GCC2-MARCH7 GCC2 chr2 109092306 + 2019_ 3_ 7_ chr2 160608913 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Intra-chr q12.3 q24.2 51601 ChimerSeq STARFusion TCGA_RNA-Seq GOLIM4-OSBPL1A GOLIM4 chr3 167742314 - OSBPL1A chr18 21819346 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 In-Frame Inter-chr q26.2 q11.2 51602 ChimerSeq STARFusion TCGA_RNA-Seq GPATCH8-ANKRD44 GPATCH8 chr17 42552197 - ANKRD44 chr2 197860185 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 In-Frame Inter-chr q21.31 q33.1 51603 ChimerSeq STARFusion TCGA_RNA-Seq HEATR3-PSMD7 HEATR3 chr16 50100450 + PSMD7 chr16 74334013 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 In-Frame Intra-chr q12.1 q23.1 51604 ChimerSeq STARFusion TCGA_RNA-Seq INPP5D-CXXC5 INPP5D chr2 233944108 + CXXC5 chr5 139059949 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 CDS-5'UTR Inter-chr q31.2 Tumor suppressor gene Transcription factor 51605 ChimerSeq STARFusion TCGA_RNA-Seq KDM4C-ARID1B KDM4C chr9 6805774 + ARID1B chr6 157405796 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Inter-chr p24.1 q25.3 Oncogene 51606 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0247-SLAIN2 KIAA0247 chr14 70125430 + SLAIN2 chr4 48422142 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 In-Frame Inter-chr p11 51607 ChimerSeq STARFusion TCGA_RNA-Seq KLF12-PIBF1 KLF12 chr13 74518118 - PIBF1 chr13 73572960 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 In-Frame Intra-chr q22.1 Transcription factor q21.33 51608 ChimerSeq STARFusion TCGA_RNA-Seq KTN1-METTL3 KTN1 chr14 56047072 + METTL3 chr14 21972024 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 5'UTR-CDS Intra-chr q22.3 q11.2 51609 ChimerSeq STARFusion TCGA_RNA-Seq LDLRAD4-TNRC6B LDLRAD4 chr18 13438383 + TNRC6B chr22 40642019 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Inter-chr p11.21 q13.1 51610 ChimerSeq STARFusion TCGA_RNA-Seq LINC00494-ORMDL1 LINC00494 chr20 46988893 + ORMDL1 chr2 190647328 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 5'UTR-5'UTR Inter-chr q13.13 q32.2 51611 ChimerSeq STARFusion TCGA_RNA-Seq MBOAT1-CD247 MBOAT1 chr6 20212367 - CD247 chr1 167410004 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Inter-chr p22.3 q24.2 51612 ChimerSeq STARFusion TCGA_RNA-Seq MCM5-PLOD1 MCM5 chr22 35819334 + PLOD1 chr1 12008033 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Inter-chr q12.3 p36.22 51613 ChimerSeq STARFusion TCGA_RNA-Seq MDFIC-PAPOLA MDFIC chr7 114582452 + PAPOLA chr14 97003313 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 In-Frame Inter-chr q31.1 q32.2 51614 ChimerSeq STARFusion TCGA_RNA-Seq MLH3-PCNXL4 MLH3 chr14 75498771 - PCNXL4 chr14 60582437 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Intra-chr q24.3 Tumor suppressor gene 51615 ChimerSeq STARFusion TCGA_RNA-Seq MR1-DOCK7 MR1 chr1 181003210 + DOCK7 chr1 63027374 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Intra-chr q25.3 p31.3 51616 ChimerSeq STARFusion TCGA_RNA-Seq NAALADL2-PHF14 NAALADL2 chr3 175042114 + PHF14 chr7 11021999 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 In-Frame Inter-chr q26.31 p21.3 51617 ChimerSeq STARFusion TCGA_RNA-Seq NCKAP1L-SMIM14 NCKAP1L chr12 54894409 + SMIM14 chr4 39606800 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Inter-chr q13.13 p14 51618 ChimerSeq STARFusion TCGA_RNA-Seq NT5C3A-RTCA NT5C3A chr7 33069241 - RTCA chr1 100756959 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Inter-chr p14.3 p21.2 51619 ChimerSeq STARFusion TCGA_RNA-Seq NT5DC1-LMO4 NT5DC1 chr6 116429598 + LMO4 chr1 87805730 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Inter-chr q22.1 p22.3 51620 ChimerSeq STARFusion TCGA_RNA-Seq PDIA6-BACH1 PDIA6 chr2 10952804 - BACH1 chr21 30693542 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 CDS-5'UTR Inter-chr p25.1 q21.3 Transcription factor 51621 ChimerSeq STARFusion TCGA_RNA-Seq PHTF2-NAP1L1 PHTF2 chr7 77428288 + NAP1L1 chr12 76454059 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 5'UTR-CDS Inter-chr q11.23 q21.2 51622 ChimerSeq STARFusion TCGA_RNA-Seq PIK3R1-PVRL3 PIK3R1 chr5 67522837 + PVRL3 chr3 110863746 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 In-Frame Inter-chr q13.1 Oncogene 51623 ChimerSeq STARFusion TCGA_RNA-Seq PLOD2-MAPKAP1 PLOD2 chr3 145878668 - MAPKAP1 chr9 128420078 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 In-Frame Inter-chr q24 q33.3 51624 ChimerSeq STARFusion TCGA_RNA-Seq PNISR-FBXL4 PNISR chr6 99873091 - FBXL4 chr6 99353546 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 5'UTR-CDS Intra-chr q16.2 q16.2 Seq+ 51625 ChimerSeq STARFusion TCGA_RNA-Seq POU2F1-LINC00623 POU2F1 chr1 167190195 + LINC00623 chr1 144301536 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Intra-chr q24.2 Transcription factor p11.2 51626 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R7-GIGYF2 PPP1R7 chr2 242089962 + GIGYF2 chr2 233651860 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 In-Frame Intra-chr q37.3 q37.1 51627 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R2-HNRNPUL1 PPP6R2 chr22 50781979 + HNRNPUL1 chr19 41774128 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 5'UTR-5'UTR Inter-chr q13.33 q13.2 51628 ChimerSeq STARFusion TCGA_RNA-Seq PREX1-BTBD10 PREX1 chr20 47444179 - BTBD10 chr11 13410688 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Inter-chr q13.13 p15.3 51629 ChimerSeq STARFusion TCGA_RNA-Seq PTPRN2-SERINC2 PTPRN2 chr7 157903521 - SERINC2 chr1 31905814 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 In-Frame Inter-chr q36.3 p35.2 51630 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-AFG3L1P PVT1 chr8 128808254 + AFG3L1P chr16 90057274 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 5'UTR-5'UTR Inter-chr q24.21 q24.3 51631 ChimerSeq STARFusion TCGA_RNA-Seq RAB7L1-SNRPN RAB7L1 chr1 205740600 - SNRPN chr15 25213079 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 CDS-5'UTR Inter-chr q11.2 51632 ChimerSeq STARFusion TCGA_RNA-Seq RAB7L1-SNURF RAB7L1 chr1 205740600 - SNURF chr15 25213079 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Inter-chr q11.2 51633 ChimerSeq STARFusion TCGA_RNA-Seq RAB7L1-SNURF RAB7L1 chr1 205740600 - SNURF chr15 25213079 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Inter-chr q11.2 51634 ChimerSeq STARFusion TCGA_RNA-Seq RBM33-RPL37A RBM33 chr7 155437613 + RPL37A chr2 217363993 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Inter-chr q36.3 q35 Seq+ 51635 ChimerSeq STARFusion TCGA_RNA-Seq RBPMS-ZNF512 RBPMS chr8 30242674 + ZNF512 chr2 27820934 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Inter-chr p12 p23.3 Transcription factor 51636 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-SEPT1 RCC1 chr1 28835417 + SEPT1 chr16 30390855 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 5'UTR-CDS Inter-chr p35.3 p11.2 51637 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-SEPT1 RCC1 chr1 28835417 + SEPT1 chr16 30390855 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 5'UTR-CDS Inter-chr p35.3 p11.2 51638 ChimerSeq STARFusion TCGA_RNA-Seq RPS19BP1-RCE1 RPS19BP1 chr22 39928400 - RCE1 chr11 66611230 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Inter-chr q13.1 q13.2 51639 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KA3-SH3KBP1 RPS6KA3 chrX 20252876 - SH3KBP1 chrX 19663593 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 In-Frame Intra-chr p22.12 p22.12 51640 ChimerSeq STARFusion TCGA_RNA-Seq SCAF11-CNTN1 SCAF11 chr12 46384136 - CNTN1 chr12 41302159 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 5'UTR-5'UTR Intra-chr q12 q12 51641 ChimerSeq STARFusion TCGA_RNA-Seq SEMA4D-NDRG1 SEMA4D chr9 92070803 - NDRG1 chr8 134296572 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 5'UTR-5'UTR Inter-chr q22.2 q24.22 Tumor suppressor gene 51642 ChimerSeq STARFusion TCGA_RNA-Seq SLC38A1-C12orf49 SLC38A1 chr12 46662309 - C12orf49 chr12 117161028 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 5'UTR-CDS Intra-chr q13.11 q24.22 51643 ChimerSeq STARFusion TCGA_RNA-Seq ST3GAL4-MYH11 ST3GAL4 chr11 126279306 + MYH11 chr16 15820911 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 In-Frame Inter-chr q24.2 Oncogene 51644 ChimerSeq STARFusion TCGA_RNA-Seq SUGT1P3-PIP5K1A SUGT1P3 chr13 41482295 - PIP5K1A chr1 151196721 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 3'UTR-CDS Inter-chr q14.11 q21.3 51645 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D15-TNRC18 TBC1D15 chr12 72233591 + TNRC18 chr7 5391725 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Inter-chr q21.1 p22.1 51646 ChimerSeq STARFusion TCGA_RNA-Seq TES-NDUFB2 TES chr7 115850788 + NDUFB2 chr7 140402666 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Intra-chr q31.2 Tumor suppressor gene q34 51647 ChimerSeq STARFusion TCGA_RNA-Seq TMEM170A-VAT1L TMEM170A chr16 75498366 - VAT1L chr16 78005747 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Intra-chr q23.1 q23.1 51648 ChimerSeq STARFusion TCGA_RNA-Seq TSKU-SKIL TSKU chr11 76494448 + SKIL chr3 170077487 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 5'UTR-5'UTR Inter-chr q13.5 q26.2 Tumor suppressor gene Transcription factor 51649 ChimerSeq STARFusion TCGA_RNA-Seq TTN-RPS6 TTN chr2 179443338 - RPS6 chr9 19378916 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 CDS-3'UTR Inter-chr q31.2 CAMK:MLCK p22.1 51650 ChimerSeq STARFusion TCGA_RNA-Seq UBA5-RSU1 UBA5 chr3 132379542 + RSU1 chr10 16635495 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 In-Frame Inter-chr q22.1 p13 51651 ChimerSeq STARFusion TCGA_RNA-Seq UBN2-TRANK1 UBN2 chr7 138951149 + TRANK1 chr3 36871153 - Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Inter-chr q34 p22.2 51652 ChimerSeq STARFusion TCGA_RNA-Seq VTI1A-GLS VTI1A chr10 114224416 + GLS chr2 191792032 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 In-Frame Inter-chr q25.2 q32.2 Tumor suppressor gene 51653 ChimerSeq STARFusion TCGA_RNA-Seq WIPI1-AMZ2 WIPI1 chr17 66440634 - AMZ2 chr17 66246935 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 In-Frame Intra-chr q24.2 q24.2 51654 ChimerSeq STARFusion TCGA_RNA-Seq ZFP36-RAB2A ZFP36 chr19 39897568 + RAB2A chr8 61504417 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Inter-chr q13.2 Tumor suppressor gene q12.1 51655 ChimerSeq STARFusion TCGA_RNA-Seq ZNF148-MKLN1 ZNF148 chr3 125032152 - MKLN1 chr7 131096065 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Inter-chr q21.2 Transcription factor q32.3 51656 ChimerSeq STARFusion TCGA_RNA-Seq ZNF519-MYL12A ZNF519 chr18 14124349 - MYL12A chr18 3255744 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 In-Frame Intra-chr p11.21 Transcription factor p11.31 51657 ChimerSeq STARFusion TCGA_RNA-Seq ZZEF1-C3orf20 ZZEF1 chr17 4045836 - C3orf20 chr3 14744637 + Exonic hg19 STAD TCGA-D7-8574-01A 2 0 Out-of-frame Inter-chr p13.2 p25.1 51658 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525073 - IGHG1 chr14 106209411 - Exonic hg19 STAD TCGA-FP-A4BF-01A 35 0 Out-of-frame Inter-chr q34 Oncogene q32.33 51659 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106209411 - Exonic hg19 STAD TCGA-FP-A4BF-01A 27 0 Out-of-frame Inter-chr q21.2 32.33 51660 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076851 + IGHG1 chr14 106209411 - Exonic hg19 STAD TCGA-FP-A4BF-01A 27 0 Out-of-frame Inter-chr q21.2 q32.33 51661 ChimerSeq STARFusion TCGA_RNA-Seq CIITA-IGKJ2 CIITA chr16 11002982 + IGKJ2 chr2 89161074 - Exonic hg19 STAD TCGA-FP-A4BF-01A 17 0 Out-of-frame Inter-chr p13.13 p11.2 51662 ChimerSeq STARFusion TCGA_RNA-Seq TOB2-MKL1 TOB2 chr22 41842383 - MKL1 chr22 40807911 - Exonic hg19 STAD TCGA-CG-5717-01A 23 1 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 51663 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992064 + VMP1 chr17 57915656 + Exonic hg19 STAD TCGA-CG-5717-01A 8 0 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 51664 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-HAUS8 CEACAM5 chr19 42233234 + HAUS8 chr19 17184668 - Exonic hg19 STAD TCGA-CG-5717-01A 6 0 Out-of-frame Intra-chr q13.2 p13.11 51665 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-HAUS8 CEACAM5 chr19 42233228 + HAUS8 chr19 17184674 - Exonic hg19 STAD TCGA-CG-5717-01A 5 0 Out-of-frame Intra-chr q13.2 p13.11 51666 ChimerSeq STARFusion TCGA_RNA-Seq CARM1-YIPF2 CARM1 chr19 11033435 + YIPF2 chr19 11033485 - Exonic hg19 STAD TCGA-CG-5717-01A 3 0 Out-of-frame Intra-chr p13.2 p13.2 51667 ChimerSeq STARFusion TCGA_RNA-Seq CRNN-PRRC2A CRNN chr1 152382401 - PRRC2A chr6 31604507 + Exonic hg19 STAD TCGA-CG-5717-01A 3 0 Out-of-frame Inter-chr q21.3 Tumor suppressor gene 51668 ChimerSeq STARFusion TCGA_RNA-Seq ONECUT3-MCM3 ONECUT3 chr19 1754853 + MCM3 chr6 52130942 - Exonic hg19 STAD TCGA-CG-5717-01A 3 0 In-Frame Inter-chr p13.3 Transcription factor p12.2 51669 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA2-TNRC6C PLEKHA2 chr8 38814904 + TNRC6C chr17 76079128 + Exonic hg19 STAD TCGA-CG-5717-01A 3 0 In-Frame Inter-chr p11.22 q25.3 51670 ChimerSeq STARFusion TCGA_RNA-Seq SPRR2D-S100A9 SPRR2D chr1 153012261 - S100A9 chr1 153333282 + Exonic hg19 STAD TCGA-CG-5717-01A 3 0 Out-of-frame Intra-chr q21.3 q21.3 51671 ChimerSeq STARFusion TCGA_RNA-Seq SPRR3-RPL13AP5 SPRR3 chr1 152976323 + RPL13AP5 chr10 98510672 + Exonic hg19 STAD TCGA-CG-5717-01A 3 0 Out-of-frame Inter-chr q21.3 q24.1 51672 ChimerSeq STARFusion TCGA_RNA-Seq TACSTD2-SERPINB5 TACSTD2 chr1 59042009 - SERPINB5 chr18 61171076 + Exonic hg19 STAD TCGA-CG-5717-01A 3 0 Out-of-frame Inter-chr p32.1 q21.33 Tumor suppressor gene 51673 ChimerSeq STARFusion TCGA_RNA-Seq UPK3B-PMS2P2 UPK3B chr7 76144726 + PMS2P2 chr7 74978010 - Exonic hg19 STAD TCGA-CG-5717-01A 3 0 Out-of-frame Intra-chr q11.23 51674 ChimerSeq STARFusion TCGA_RNA-Seq LPIN2-EMILIN2 LPIN2 chr18 3013085 - EMILIN2 chr18 2884962 + Exonic hg19 STAD TCGA-CG-5717-01A 2 1 5'UTR-CDS Intra-chr p11.31 p11.32 51675 ChimerSeq STARFusion TCGA_RNA-Seq ACTR6-UHRF1BP1L ACTR6 chr12 100601564 + UHRF1BP1L chr12 100433567 - Exonic hg19 STAD TCGA-CG-5717-01A 2 0 In-Frame Intra-chr q23.1 q23.1 51676 ChimerSeq STARFusion TCGA_RNA-Seq BBS9-BMPER BBS9 chr7 33573788 + BMPER chr7 33946430 + Exonic hg19 STAD TCGA-CG-5717-01A 2 0 In-Frame Intra-chr p14.3 p14.3 51677 ChimerSeq STARFusion TCGA_RNA-Seq C7orf60-IMMP2L C7orf60 chr7 112555361 - IMMP2L chr7 110603621 - Exonic hg19 STAD TCGA-CG-5717-01A 2 0 In-Frame Intra-chr q31.1 51678 ChimerSeq STARFusion TCGA_RNA-Seq COPS7B-IMPA2 COPS7B chr2 232653442 + IMPA2 chr18 12014264 + Exonic hg19 STAD TCGA-CG-5717-01A 2 0 In-Frame Inter-chr q37.1 p11.21 Seq+ 51679 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-GMCL1 CPSF6 chr12 69656342 + GMCL1 chr2 70106041 + Exonic hg19 STAD TCGA-CG-5717-01A 2 0 3'UTR-CDS Inter-chr q15 p13.3 51680 ChimerSeq STARFusion TCGA_RNA-Seq EPT1-CCNI EPT1 chr2 26596497 + CCNI chr4 77976533 - Exonic hg19 STAD TCGA-CG-5717-01A 2 0 In-Frame Inter-chr q21.1 51681 ChimerSeq STARFusion TCGA_RNA-Seq FAM208B-YWHAQ FAM208B chr10 5727138 + YWHAQ chr2 9731644 - Exonic hg19 STAD TCGA-CG-5717-01A 2 0 5'UTR-CDS Inter-chr p15.1 p25.1 51682 ChimerSeq STARFusion TCGA_RNA-Seq HSD17B12-TTC17 HSD17B12 chr11 43819977 + TTC17 chr11 43469552 + Exonic hg19 STAD TCGA-CG-5717-01A 2 0 In-Frame Intra-chr p11.2 p12 51683 ChimerSeq STARFusion TCGA_RNA-Seq KDM5B-KLHL12 KDM5B chr1 202742246 - KLHL12 chr1 202880331 - Exonic hg19 STAD TCGA-CG-5717-01A 2 0 In-Frame Intra-chr q32.1 Transcription factor q32.1 51684 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1467-LGR4 KIAA1467 chr12 13197374 + LGR4 chr11 27434407 - Exonic hg19 STAD TCGA-CG-5717-01A 2 0 Out-of-frame Inter-chr p14.1 51685 ChimerSeq STARFusion TCGA_RNA-Seq MAN1A2-LPXN MAN1A2 chr1 118045592 + LPXN chr11 58322413 - Exonic hg19 STAD TCGA-CG-5717-01A 2 0 In-Frame Inter-chr p12 q12.1 51686 ChimerSeq STARFusion TCGA_RNA-Seq MRPS10-TRERF1 MRPS10 chr6 42185540 - TRERF1 chr6 42200666 - Exonic hg19 STAD TCGA-CG-5717-01A 2 0 Out-of-frame Intra-chr p21.1 p21.1 Transcription factor 51687 ChimerSeq STARFusion TCGA_RNA-Seq MRPS6-CSNK1E MRPS6 chr21 35445568 + CSNK1E chr22 38710174 - Exonic hg19 STAD TCGA-CG-5717-01A 2 0 5'UTR-5'UTR Inter-chr q22.11 q13.1 51688 ChimerSeq STARFusion TCGA_RNA-Seq MUC21-CD22 MUC21 chr6 30955458 + CD22 chr19 35820090 + Exonic hg19 STAD TCGA-CG-5717-01A 2 0 CDS-5'UTR Inter-chr q13.12 51689 ChimerSeq STARFusion TCGA_RNA-Seq NBR2-DNAJB6 NBR2 chr17 41277787 + DNAJB6 chr7 157208710 + Exonic hg19 STAD TCGA-CG-5717-01A 2 0 5'UTR-CDS Inter-chr q21.31 q36.3 51690 ChimerSeq STARFusion TCGA_RNA-Seq PNKP-RDH13 PNKP chr19 50369656 - RDH13 chr19 55556677 - Exonic hg19 STAD TCGA-CG-5717-01A 2 0 Out-of-frame Intra-chr q13.33 51691 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57990165 + VMP1 chr17 57915656 + Exonic hg19 STAD TCGA-CG-5717-01A 2 0 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 51692 ChimerSeq STARFusion TCGA_RNA-Seq SBF2-NFU1 SBF2 chr11 10315562 - NFU1 chr2 69659137 - Exonic hg19 STAD TCGA-CG-5717-01A 2 0 Out-of-frame Inter-chr p15.4 p13.3 51693 ChimerSeq STARFusion TCGA_RNA-Seq SSBP2-MSH3 SSBP2 chr5 80733249 - MSH3 chr5 79974746 + Exonic hg19 STAD TCGA-CG-5717-01A 2 0 In-Frame Intra-chr q14.1 Tumor suppressor gene q14.1 51694 ChimerSeq STARFusion TCGA_RNA-Seq STRN3-YES1 STRN3 chr14 31404369 - YES1 chr18 756835 - Exonic hg19 STAD TCGA-CG-5717-01A 2 0 CDS-5'UTR Inter-chr q12 p11.32 51695 ChimerSeq STARFusion TCGA_RNA-Seq TAGLN-ATAD3A TAGLN chr11 117070148 + ATAD3A chr1 1469306 + Exonic hg19 STAD TCGA-CG-5717-01A 2 0 5'UTR-CDS Inter-chr q23.3 Tumor suppressor gene p36.33 51696 ChimerSeq STARFusion TCGA_RNA-Seq TCP1-AKT3 TCP1 chr6 160210437 - AKT3 chr1 244006584 - Exonic hg19 STAD TCGA-CG-5717-01A 2 0 5'UTR-5'UTR Inter-chr q25.3 AGC:Akt Oncogene 51697 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN15-C10orf35 TSPAN15 chr10 71211446 + C10orf35 chr10 71391236 + Exonic hg19 STAD TCGA-CG-5717-01A 2 0 CDS-5'UTR Intra-chr q22.1 q22.1 51698 ChimerSeq STARFusion TCGA_RNA-Seq USP47-ZFAND4 USP47 chr11 11906127 + ZFAND4 chr10 46113708 - Exonic hg19 STAD TCGA-CG-5717-01A 2 0 Out-of-frame Inter-chr p15.3 q11.22 51699 ChimerSeq STARFusion TCGA_RNA-Seq LAMA3-OSBPL1A LAMA3 chr18 21513899 + OSBPL1A chr18 21892070 - Exonic hg19 STAD TCGA-IN-A7NU-01A 56 22 In-Frame Intra-chr q11.2 q11.2 Seq+ 51700 ChimerSeq STARFusion TCGA_RNA-Seq NT5DC3-KNTC1 NT5DC3 chr12 104234727 - KNTC1 chr12 123095369 + Exonic hg19 STAD TCGA-BR-7959-01A 256 105 Out-of-frame Intra-chr q23.3 q24.31 Seq+ 51701 ChimerSeq STARFusion TCGA_RNA-Seq APAF1-HOXC10 APAF1 chr12 99042275 + HOXC10 chr12 54382953 + Exonic hg19 STAD TCGA-BR-7959-01A 139 120 Out-of-frame Intra-chr q23.1 Tumor suppressor gene q13.13 Transcription factor Seq+ 51702 ChimerSeq STARFusion TCGA_RNA-Seq TMPO-CS TMPO chr12 98931350 + CS chr12 56680429 - Exonic hg19 STAD TCGA-BR-7959-01A 70 33 In-Frame Intra-chr q23.1 q13.3 Seq+ 51703 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1033-HCAR1 KIAA1033 chr12 105536336 + HCAR1 chr12 123105249 - Exonic hg19 STAD TCGA-BR-7959-01A 60 48 CDS-3'UTR Intra-chr q24.31 Oncogene Seq+ 51704 ChimerSeq STARFusion TCGA_RNA-Seq TPPP-FAM134B TPPP chr5 677865 - FAM134B chr5 16572211 - Exonic hg19 STAD TCGA-BR-7959-01A 36 16 In-Frame Intra-chr p15.33 Seq+ 51705 ChimerSeq STARFusion TCGA_RNA-Seq SRGAP1-KNTC1 SRGAP1 chr12 64238663 + KNTC1 chr12 123075154 + Exonic hg19 STAD TCGA-BR-7959-01A 26 7 Out-of-frame Intra-chr q14.2 q24.31 Seq+ 51706 ChimerSeq STARFusion TCGA_RNA-Seq HOOK3-GTF2E2 HOOK3 chr8 42798588 + GTF2E2 chr8 30492640 - Exonic hg19 STAD TCGA-FP-8099-01A 25 14 In-Frame Intra-chr p11.21 Oncogene p12 Seq+ 51707 ChimerSeq STARFusion TCGA_RNA-Seq CREB3L1-ATG13 CREB3L1 chr11 46299764 + ATG13 chr11 46651595 + Exonic hg19 STAD TCGA-FP-8099-01A 10 9 CDS-5'UTR Intra-chr p11.2 Tumor suppressor gene Transcription factor p11.2 Seq+ 51708 ChimerSeq STARFusion TCGA_RNA-Seq CREB3L1-ATG13 CREB3L1 chr11 46299764 + ATG13 chr11 46665829 + Exonic hg19 STAD TCGA-FP-8099-01A 7 8 CDS-5'UTR Intra-chr p11.2 Tumor suppressor gene Transcription factor p11.2 Seq+ 51709 ChimerSeq STARFusion TCGA_RNA-Seq SKIL-TNIK SKIL chr3 170079215 + TNIK chr3 171087476 - Exonic hg19 STAD TCGA-VQ-AA6B-01A 242 24 Out-of-frame Intra-chr q26.2 Tumor suppressor gene Transcription factor q26.31 STE:STE20 Seq+ 51710 ChimerSeq STARFusion TCGA_RNA-Seq PLD1-SLC7A14 PLD1 chr3 171338176 - SLC7A14 chr3 170219134 - Exonic hg19 STAD TCGA-VQ-AA6B-01A 157 9 In-Frame Intra-chr q26.31 Tumor suppressor gene q26.2 Seq+ 51711 ChimerSeq STARFusion TCGA_RNA-Seq TNIK-GPR160 TNIK chr3 171177796 - GPR160 chr3 169797562 + Exonic hg19 STAD TCGA-VQ-AA6B-01A 75 17 CDS-5'UTR Intra-chr q26.31 STE:STE20 q26.2 51712 ChimerSeq STARFusion TCGA_RNA-Seq TNIK-GPR160 TNIK chr3 171177796 - GPR160 chr3 169756703 + Exonic hg19 STAD TCGA-VQ-AA6B-01A 70 17 CDS-5'UTR Intra-chr q26.31 STE:STE20 q26.2 51713 ChimerSeq STARFusion TCGA_RNA-Seq GPR160-PRKCI GPR160 chr3 169797685 + PRKCI chr3 169998015 + Exonic hg19 STAD TCGA-VQ-AA6B-01A 36 4 5'UTR-CDS Intra-chr q26.2 q26.2 Seq+ 51714 ChimerSeq STARFusion TCGA_RNA-Seq REG1A-DDX52 REG1A chr2 79350526 + DDX52 chr17 35985986 - Exonic hg19 STAD TCGA-VQ-AA6B-01A 33 0 Out-of-frame Inter-chr p12 q12 51715 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP12-KIF5B ARHGAP12 chr10 32217611 - KIF5B chr10 32306287 - Exonic hg19 STAD TCGA-VQ-AA6B-01A 20 6 5'UTR-CDS Intra-chr p11.22 p11.22 Seq+ 51716 ChimerSeq STARFusion TCGA_RNA-Seq PINX1-HGSNAT PINX1 chr8 10683662 - HGSNAT chr8 43037288 + Exonic hg19 STAD TCGA-BR-7717-01A 65 8 In-Frame Intra-chr p23.1 Tumor suppressor gene p11.21 Seq+ 51717 ChimerSeq STARFusion TCGA_RNA-Seq SOX7-HGSNAT SOX7 chr8 10683662 - HGSNAT chr8 43037288 + Exonic hg19 STAD TCGA-BR-7717-01A 65 8 5'UTR-CDS Intra-chr p23.1 Tumor suppressor gene Transcription factor p11.21 51718 ChimerSeq STARFusion TCGA_RNA-Seq SOX7-HGSNAT SOX7 chr8 10683662 - HGSNAT chr8 43037288 + Exonic hg19 STAD TCGA-BR-7717-01A 65 8 5'UTR-CDS Intra-chr p23.1 Tumor suppressor gene Transcription factor p11.21 51719 ChimerSeq STARFusion TCGA_RNA-Seq VAPB-RBM38 VAPB chr20 56964573 + RBM38 chr20 55967710 + Exonic hg19 STAD TCGA-BR-7717-01A 22 2 Out-of-frame Intra-chr q13.32 q13.31 Tumor suppressor gene Seq+ 51720 ChimerSeq STARFusion TCGA_RNA-Seq PINX1-HGSNAT PINX1 chr8 10677703 - HGSNAT chr8 43037288 + Exonic hg19 STAD TCGA-BR-7717-01A 9 8 Out-of-frame Intra-chr p23.1 Tumor suppressor gene p11.21 Seq+ 51721 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A13-C7orf55 SLC25A13 chr7 95926210 - C7orf55 chr7 139030247 + Exonic hg19 STAD TCGA-CG-4477-01A 22 71 In-Frame Intra-chr q21.3 Seq+ 51722 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A13-LUC7L2 SLC25A13 chr7 95926210 - LUC7L2 chr7 139030247 + Exonic hg19 STAD TCGA-CG-4477-01A 22 68 In-Frame Intra-chr q21.3 q34 Seq+ 51723 ChimerSeq STARFusion TCGA_RNA-Seq SERPINH1-ZBTB44 SERPINH1 chr11 75273364 + ZBTB44 chr11 130131824 - Exonic hg19 STAD TCGA-CG-4477-01A 2 49 5'UTR-5'UTR Intra-chr q13.5 q24.3 Transcription factor Seq+ 51724 ChimerSeq STARFusion TCGA_RNA-Seq GFPT1-NF1 GFPT1 chr2 69565030 - NF1 chr17 29664837 + Exonic hg19 STAD TCGA-CG-4477-01A 9 10 In-Frame Inter-chr p13.3 q11.2 Oncogene Tumor suppressor gene Seq+ 51725 ChimerSeq STARFusion TCGA_RNA-Seq TOM1L2-NXN TOM1L2 chr17 17787948 - NXN chr17 729318 - Exonic hg19 STAD TCGA-CG-4477-01A 3 28 In-Frame Intra-chr p11.2 Tumor suppressor gene p13.3 Seq+ 51726 ChimerSeq STARFusion TCGA_RNA-Seq CD274-IGFBPL1 CD274 chr9 5465606 + IGFBPL1 chr9 38409214 - Exonic hg19 STAD TCGA-CG-4477-01A 5 9 CDS-3'UTR Intra-chr p24.1 Oncogene p13.1 Tumor suppressor gene Seq+ 51727 ChimerSeq STARFusion TCGA_RNA-Seq B9D2-HNRNPL B9D2 chr19 41863802 - HNRNPL chr19 39327420 - Exonic hg19 STAD TCGA-CG-4477-01A 2 15 In-Frame Intra-chr q13.2 Seq+ 51728 ChimerSeq STARFusion TCGA_RNA-Seq UBE2E1-RBM5 UBE2E1 chr3 23853001 + RBM5 chr3 50137415 + Exonic hg19 STAD TCGA-CG-4477-01A 4 6 Out-of-frame Intra-chr p24.2 p21.31 Tumor suppressor gene 51729 ChimerSeq STARFusion TCGA_RNA-Seq UBE2E1-RBM6 UBE2E1 chr3 23853001 + RBM6 chr3 50137415 + Exonic hg19 STAD TCGA-CG-4477-01A 4 5 CDS-3'UTR Intra-chr p24.2 p21.31 Tumor suppressor gene 51730 ChimerSeq STARFusion TCGA_RNA-Seq C7orf55-SLC25A13 C7orf55 chr7 139026268 + SLC25A13 chr7 95906650 - Exonic hg19 STAD TCGA-CG-4477-01A 2 12 In-Frame Intra-chr q21.3 Seq+ 51731 ChimerSeq STARFusion TCGA_RNA-Seq LUC7L2-SLC25A13 LUC7L2 chr7 139026268 + SLC25A13 chr7 95906650 - Exonic hg19 STAD TCGA-CG-4477-01A 2 11 In-Frame Intra-chr q34 q21.3 Seq+ 51732 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125699 - CXCL16 chr17 4637313 - Exonic hg19 STAD TCGA-CG-4477-01A 4 2 Out-of-frame Inter-chr q12.2 p13.2 51733 ChimerSeq STARFusion TCGA_RNA-Seq NF1-GFPT1 NF1 chr17 29664600 + GFPT1 chr2 69556930 - Exonic hg19 STAD TCGA-CG-4477-01A 2 10 In-Frame Inter-chr q11.2 Oncogene Tumor suppressor gene p13.3 Seq+ 51734 ChimerSeq STARFusion TCGA_RNA-Seq NFXL1-RAB28 NFXL1 chr4 47864863 - RAB28 chr4 13476030 - Exonic hg19 STAD TCGA-CG-4477-01A 4 1 Out-of-frame Intra-chr p12 Transcription factor p15.33 51735 ChimerSeq STARFusion TCGA_RNA-Seq RNF111-CCNB2 RNF111 chr15 59280267 + CCNB2 chr15 59415716 + Exonic hg19 STAD TCGA-D7-8570-01A 59 22 5'UTR-CDS Intra-chr q22.1 Tumor suppressor gene q22.2 Seq+ 51736 ChimerSeq STARFusion TCGA_RNA-Seq EIF3L-LINC01019 EIF3L chr22 38245489 + LINC01019 chr5 3422736 - Exonic hg19 STAD TCGA-D7-8570-01A 23 0 Out-of-frame Inter-chr q13.1 p15.33 51737 ChimerSeq STARFusion TCGA_RNA-Seq CD74-LRRC4B CD74 chr5 149785823 - LRRC4B chr19 51071236 - Exonic hg19 STAD TCGA-D7-8570-01A 10 0 Out-of-frame Inter-chr q33.1 q13.33 51738 ChimerSeq STARFusion TCGA_RNA-Seq LRG1-LYZ LRG1 chr19 4537888 - LYZ chr12 69747562 + Exonic hg19 STAD TCGA-D7-8570-01A 4 11 Out-of-frame Inter-chr p13.3 q15 51739 ChimerSeq STARFusion TCGA_RNA-Seq DBIL5P-IGHJ5 DBIL5P chr17 657601 + IGHJ5 chr14 106330067 - Exonic hg19 STAD TCGA-D7-8570-01A 4 0 Out-of-frame Inter-chr p13.3 51740 ChimerSeq STARFusion TCGA_RNA-Seq ATE1-POLRMT ATE1 chr10 123687505 - POLRMT chr19 633530 - Exonic hg19 STAD TCGA-D7-8570-01A 3 0 Out-of-frame Inter-chr q26.13 p13.3 51741 ChimerSeq STARFusion TCGA_RNA-Seq HTRA2-APP HTRA2 chr2 74756786 + APP chr21 27347440 - Exonic hg19 STAD TCGA-D7-8570-01A 3 0 Out-of-frame Inter-chr p13.1 Tumor suppressor gene q21.3 51742 ChimerSeq STARFusion TCGA_RNA-Seq NMT1-TNFAIP3 NMT1 chr17 43186216 + TNFAIP3 chr6 138188400 + Exonic hg19 STAD TCGA-D7-8570-01A 3 0 Out-of-frame Inter-chr q21.31 q23.3 Oncogene Tumor suppressor gene 51743 ChimerSeq STARFusion TCGA_RNA-Seq STAU2-GRTP1 STAU2 chr8 74585342 - GRTP1 chr13 113980406 - Exonic hg19 STAD TCGA-D7-8570-01A 2 1 Out-of-frame Inter-chr q21.11 q34 51744 ChimerSeq STARFusion TCGA_RNA-Seq AIM2-PHKB AIM2 chr1 159046423 - PHKB chr16 47497810 + Exonic hg19 STAD TCGA-D7-8570-01A 2 0 5'UTR-5'UTR Inter-chr q23.2 Tumor suppressor gene q12.1 51745 ChimerSeq STARFusion TCGA_RNA-Seq C16orf87-RPLP0 C16orf87 chr16 46864996 - RPLP0 chr12 120635265 - Exonic hg19 STAD TCGA-D7-8570-01A 2 0 In-Frame Inter-chr q11.2 q24.23 51746 ChimerSeq STARFusion TCGA_RNA-Seq CD247-SSH2 CD247 chr1 167487645 - SSH2 chr17 28030080 - Exonic hg19 STAD TCGA-D7-8570-01A 2 0 Out-of-frame Inter-chr q24.2 q11.2 Seq+ 51747 ChimerSeq STARFusion TCGA_RNA-Seq CDK6-C7orf60 CDK6 chr7 92462405 - C7orf60 chr7 112535794 - Exonic hg19 STAD TCGA-D7-8570-01A 2 0 In-Frame Intra-chr q21.2 CMGC:CDK Oncogene Tumor suppressor gene 51748 ChimerSeq STARFusion TCGA_RNA-Seq CGN-B4GALT3 CGN chr1 151505048 + B4GALT3 chr1 161143839 - Exonic hg19 STAD TCGA-D7-8570-01A 2 0 In-Frame Intra-chr q21.3 q23.3 51749 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-EIF2B2 CPSF6 chr12 69656342 + EIF2B2 chr14 75475734 + Exonic hg19 STAD TCGA-D7-8570-01A 2 0 3'UTR-CDS Inter-chr q15 q24.3 51750 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-TMBIM4 CPSF6 chr12 69656342 + TMBIM4 chr12 66547228 - Exonic hg19 STAD TCGA-D7-8570-01A 2 0 3'UTR-CDS Intra-chr q15 q14.3 51751 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-TMBIM4 CPSF6 chr12 69656342 + TMBIM4 chr12 66547228 - Exonic hg19 STAD TCGA-D7-8570-01A 2 0 3'UTR-CDS Intra-chr q15 q14.3 51752 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L2-GIGYF2 DIS3L2 chr2 232826475 + GIGYF2 chr2 233708756 + Exonic hg19 STAD TCGA-D7-8570-01A 2 0 5'UTR-CDS Intra-chr q37.1 q37.1 51753 ChimerSeq STARFusion TCGA_RNA-Seq KCMF1-RTN4 KCMF1 chr2 85198590 + RTN4 chr2 55214834 - Exonic hg19 STAD TCGA-D7-8570-01A 2 0 In-Frame Intra-chr p11.2 Transcription factor p16.1 Tumor suppressor gene Seq+ 51754 ChimerSeq STARFusion TCGA_RNA-Seq KPNA1-CTTN KPNA1 chr3 122156017 - CTTN chr11 70265852 + Exonic hg19 STAD TCGA-D7-8570-01A 2 0 Out-of-frame Inter-chr q21.1 q13.3 51755 ChimerSeq STARFusion TCGA_RNA-Seq LATS2-CRYL1 LATS2 chr13 21619824 - CRYL1 chr13 21063635 - Exonic hg19 STAD TCGA-D7-8570-01A 2 0 Out-of-frame Intra-chr q12.11 AGC:NDR Tumor suppressor gene q12.11 51756 ChimerSeq STARFusion TCGA_RNA-Seq MAGI1-MITF MAGI1 chr3 65607647 - MITF chr3 70013998 + Exonic hg19 STAD TCGA-D7-8570-01A 2 0 Out-of-frame Intra-chr Oncogene p13 Oncogene Transcription factor Seq+ 51757 ChimerSeq STARFusion TCGA_RNA-Seq NBEAL1-RAPH1 NBEAL1 chr2 203881158 + RAPH1 chr2 204360076 - Exonic hg19 STAD TCGA-D7-8570-01A 2 0 CDS-5'UTR Intra-chr q33.2 q33.2 51758 ChimerSeq STARFusion TCGA_RNA-Seq NTN1-STX8 NTN1 chr17 9124559 + STX8 chr17 9153962 - Exonic hg19 STAD TCGA-D7-8570-01A 2 0 In-Frame Intra-chr p13.1 p13.1 Seq+ 51759 ChimerSeq STARFusion TCGA_RNA-Seq PITPNC1-ARSG PITPNC1 chr17 65374318 + ARSG chr17 66303084 + Exonic hg19 STAD TCGA-D7-8570-01A 2 0 CDS-5'UTR Intra-chr q24.2 q24.2 51760 ChimerSeq STARFusion TCGA_RNA-Seq RNF216-MAGED2 RNF216 chr7 5751392 - MAGED2 chrX 54837254 + Exonic hg19 STAD TCGA-D7-8570-01A 2 0 In-Frame Inter-chr p22.1 p11.21 51761 ChimerSeq STARFusion TCGA_RNA-Seq SLC9A7-TDRD3 SLC9A7 chrX 46618140 - TDRD3 chr13 61102501 + Exonic hg19 STAD TCGA-D7-8570-01A 2 0 In-Frame Inter-chr p11.3 q21.2 51762 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D1-CAPZB TBC1D1 chr4 37979150 + CAPZB chr1 19746244 - Exonic hg19 STAD TCGA-D7-8570-01A 2 0 5'UTR-CDS Inter-chr p14 p36.13 51763 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-FAM177A1 TBL1XR1 chr3 176849151 - FAM177A1 chr14 35571887 + Exonic hg19 STAD TCGA-D7-8570-01A 2 0 Out-of-frame Inter-chr q26.32 q13.2 51764 ChimerSeq STARFusion TCGA_RNA-Seq TMEM99-SRPK1 TMEM99 chr17 38975460 + SRPK1 chr6 35810381 - Exonic hg19 STAD TCGA-D7-8570-01A 2 0 5'UTR-CDS Inter-chr q21.2 p21.31 CMGC:SRPK 51765 ChimerSeq STARFusion TCGA_RNA-Seq ZNF440-MEN1 ZNF440 chr19 11925265 + MEN1 chr11 64577604 - Exonic hg19 STAD TCGA-D7-8570-01A 2 0 CDS-5'UTR Inter-chr p13.2 Transcription factor q13.1 Oncogene Tumor suppressor gene 51766 ChimerSeq STARFusion TCGA_RNA-Seq BAIAP2L1-CYP3A7 BAIAP2L1 chr7 98030114 - CYP3A7 chr7 99328775 - Exonic hg19 STAD TCGA-BR-6564-01A 26 0 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 51767 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2A-FAM134C GATAD2A chr19 19516828 + FAM134C chr17 40738909 - Exonic hg19 STAD TCGA-IN-A6RO-01A 17 28 5'UTR-CDS Inter-chr p13.11 Transcription factor Seq+ 51768 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2A-FAM134C GATAD2A chr19 19496947 + FAM134C chr17 40738155 - Exonic hg19 STAD TCGA-IN-A6RO-01A 14 28 5'UTR-CDS Inter-chr p13.11 Transcription factor Seq+ 51769 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2A-FAM134C GATAD2A chr19 19496947 + FAM134C chr17 40738909 - Exonic hg19 STAD TCGA-IN-A6RO-01A 10 28 5'UTR-CDS Inter-chr p13.11 Transcription factor Seq+ 51770 ChimerSeq STARFusion TCGA_RNA-Seq ASUN-ZNF26 ASUN chr12 27089512 - ZNF26 chr12 133588791 + Exonic hg19 STAD TCGA-IN-A6RO-01A 14 6 CDS-5'UTR Intra-chr q24.33 Transcription factor 51771 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2A-FAM134C GATAD2A chr19 19516828 + FAM134C chr17 40739882 - Exonic hg19 STAD TCGA-IN-A6RO-01A 6 28 5'UTR-CDS Inter-chr p13.11 Transcription factor Seq+ 51772 ChimerSeq STARFusion TCGA_RNA-Seq TAF3-KCNMA1 TAF3 chr10 7866523 + KCNMA1 chr10 79163781 - Exonic hg19 STAD TCGA-IN-A6RO-01A 11 3 Out-of-frame Intra-chr p14 q22.3 Seq+ 51773 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2A-FAM134C GATAD2A chr19 19516828 + FAM134C chr17 40738155 - Exonic hg19 STAD TCGA-IN-A6RO-01A 4 28 5'UTR-CDS Inter-chr p13.11 Transcription factor Seq+ 51774 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2A-FAM134C GATAD2A chr19 19496947 + FAM134C chr17 40739882 - Exonic hg19 STAD TCGA-IN-A6RO-01A 2 28 5'UTR-CDS Inter-chr p13.11 Transcription factor Seq+ 51775 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGHG2 INTS1 chr7 1511982 - IGHG2 chr14 106111130 - Exonic hg19 STAD TCGA-BR-8591-01A 30 3 Out-of-frame Inter-chr p22.3 51776 ChimerSeq STARFusion TCGA_RNA-Seq MED25-EZR MED25 chr19 50337542 + EZR chr6 159187353 - Exonic hg19 STAD TCGA-BR-8591-01A 27 1 Out-of-frame Inter-chr q13.33 q25.3 51777 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHG1-MTHFD1L PLEKHG1 chr6 151055228 + MTHFD1L chr6 151413603 + Exonic hg19 STAD TCGA-BR-8591-01A 13 10 In-Frame Intra-chr q25.1 q25.1 Seq+ 51778 ChimerSeq STARFusion TCGA_RNA-Seq ACAT2-IGHG2 ACAT2 chr6 160183157 + IGHG2 chr14 106111128 - Exonic hg19 STAD TCGA-BR-8591-01A 14 1 Out-of-frame Inter-chr q25.3 51779 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGHG2 INTS1 chr7 1511982 - IGHG2 chr14 106209411 - Exonic hg19 STAD TCGA-BR-8591-01A 12 3 Out-of-frame Inter-chr p22.3 51780 ChimerSeq STARFusion TCGA_RNA-Seq KMT2D-IGHG1 KMT2D chr12 49432260 - IGHG1 chr14 106331659 - Exonic hg19 STAD TCGA-BR-8591-01A 12 2 Out-of-frame Inter-chr q13.12 Oncogene q32.33 51781 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGHG2 INTS1 chr7 1511982 - IGHG2 chr14 106136185 - Exonic hg19 STAD TCGA-BR-8591-01A 11 2 Out-of-frame Inter-chr p22.3 51782 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL2-TNFAIP2 RN7SL2 chr14 50329518 - TNFAIP2 chr14 103602903 + Exonic hg19 STAD TCGA-BR-8591-01A 9 8 Out-of-frame Intra-chr q21.3 q32.32 51783 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGHG1 SLC7A5 chr16 87868137 - IGHG1 chr14 106209410 - Exonic hg19 STAD TCGA-BR-8591-01A 4 14 Out-of-frame Inter-chr q24.2 q32.33 51784 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL2-TNFAIP2 RN7SL2 chr14 50329319 - TNFAIP2 chr14 103602907 + Exonic hg19 STAD TCGA-BR-8591-01A 5 8 Out-of-frame Intra-chr q21.3 q32.32 51785 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL1-PIGR RN7SL1 chr14 50053345 + PIGR chr1 207102866 - Exonic hg19 STAD TCGA-BR-8591-01A 3 10 Out-of-frame Inter-chr q21.3 q32.1 51786 ChimerSeq STARFusion TCGA_RNA-Seq DDOST-PIGR DDOST chr1 20978625 - PIGR chr1 207102635 - Exonic hg19 STAD TCGA-BR-8591-01A 3 8 Out-of-frame Intra-chr p36.12 q32.1 51787 ChimerSeq STARFusion TCGA_RNA-Seq APC-DTWD2 APC chr5 112164669 + DTWD2 chr5 118183913 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 22 1 In-Frame Intra-chr q22.2 Oncogene Tumor suppressor gene q23.1 Seq+ 51788 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125699 - CXCL16 chr17 4637313 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 16 0 Out-of-frame Inter-chr q12.2 p13.2 51789 ChimerSeq STARFusion TCGA_RNA-Seq CNIH3-WDR26 CNIH3 chr1 224622486 + WDR26 chr1 224621879 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 5 0 Out-of-frame Intra-chr q42.12 q42.12 51790 ChimerSeq STARFusion TCGA_RNA-Seq ADAP1-SUN1 ADAP1 chr7 959605 - SUN1 chr7 908986 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 4 0 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 51791 ChimerSeq STARFusion TCGA_RNA-Seq COX19-SUN1 COX19 chr7 959605 - SUN1 chr7 908986 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 4 0 3'UTR-CDS Intra-chr p22.3 p22.3 51792 ChimerSeq STARFusion TCGA_RNA-Seq AHSA1-NCL AHSA1 chr14 77924526 + NCL chr2 232325277 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 3 0 Out-of-frame Inter-chr q24.3 q37.1 51793 ChimerSeq STARFusion TCGA_RNA-Seq BTBD11-PROSER1 BTBD11 chr12 107914413 + PROSER1 chr13 39591681 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 3 0 In-Frame Inter-chr q23.3 q13.3 51794 ChimerSeq STARFusion TCGA_RNA-Seq FAM120A-MTRF1 FAM120A chr9 96327703 + MTRF1 chr13 41836172 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 3 0 Out-of-frame Inter-chr q22.31 q14.11 51795 ChimerSeq STARFusion TCGA_RNA-Seq FAM213A-LYZ FAM213A chr10 82192105 + LYZ chr12 69747553 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 3 0 Out-of-frame Inter-chr q23.1 q15 51796 ChimerSeq STARFusion TCGA_RNA-Seq RPL27-AARSD1 RPL27 chr17 41150848 + AARSD1 chr17 41103911 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 3 0 In-Frame Intra-chr q21.31 q21.31 51797 ChimerSeq STARFusion TCGA_RNA-Seq TMEM258-TRIM31 TMEM258 chr11 61557977 - TRIM31 chr6 30071531 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 3 0 Out-of-frame Inter-chr q12.2 Tumor suppressor gene 51798 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF7-BPTF ARHGEF7 chr13 111857720 + BPTF chr17 65899905 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 Out-of-frame Inter-chr q34 q24.2 Transcription factor 51799 ChimerSeq STARFusion TCGA_RNA-Seq ATP9A-UBE2D2 ATP9A chr20 50384841 - UBE2D2 chr5 138979957 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 Out-of-frame Inter-chr q13.2 q31.2 51800 ChimerSeq STARFusion TCGA_RNA-Seq BCL2L11-ACSS1 BCL2L11 chr2 111878765 + ACSS1 chr20 25011594 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 5'UTR-CDS Inter-chr q13 Tumor suppressor gene p11.21 51801 ChimerSeq STARFusion TCGA_RNA-Seq C7orf50-MAD1L1 C7orf50 chr7 1166893 - MAD1L1 chr7 1855864 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 51802 ChimerSeq STARFusion TCGA_RNA-Seq C8orf31-BIN1 C8orf31 chr8 144120986 + BIN1 chr2 127821222 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 5'UTR-CDS Inter-chr q14.3 Tumor suppressor gene 51803 ChimerSeq STARFusion TCGA_RNA-Seq CABLES2-SLCO4A1 CABLES2 chr20 60981971 - SLCO4A1 chr20 61291764 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 In-Frame Intra-chr q13.33 q13.33 51804 ChimerSeq STARFusion TCGA_RNA-Seq CAPN15-CABLES2 CAPN15 chr16 583998 + CABLES2 chr20 60971648 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 Out-of-frame Inter-chr p13.3 q13.33 51805 ChimerSeq STARFusion TCGA_RNA-Seq CBX5-STYXL1 CBX5 chr12 54673792 - STYXL1 chr7 75634722 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 5'UTR-CDS Inter-chr q13.13 Tumor suppressor gene q11.23 51806 ChimerSeq STARFusion TCGA_RNA-Seq CDC14B-MRRF CDC14B chr9 99381501 - MRRF chr9 125075506 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 Out-of-frame Intra-chr q22.33 q33.2 51807 ChimerSeq STARFusion TCGA_RNA-Seq CHORDC1-NARS2 CHORDC1 chr11 89951303 - NARS2 chr11 78154804 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 In-Frame Intra-chr q14.3 q14.1 51808 ChimerSeq STARFusion TCGA_RNA-Seq CIT-CCDC14 CIT chr12 120287978 - CCDC14 chr3 123675642 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 In-Frame Inter-chr q24.23 q21.1 51809 ChimerSeq STARFusion TCGA_RNA-Seq CNBP-RPN1 CNBP chr3 128902619 - RPN1 chr3 128341252 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 5'UTR-CDS Intra-chr q21.3 q21.3 51810 ChimerSeq STARFusion TCGA_RNA-Seq CREB3L1-MGRN1 CREB3L1 chr11 46321714 + MGRN1 chr16 4727464 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 In-Frame Inter-chr p11.2 Tumor suppressor gene Transcription factor p13.3 Seq+ 51811 ChimerSeq STARFusion TCGA_RNA-Seq ELF1-ANXA10 ELF1 chr13 41634974 - ANXA10 chr4 169049235 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 5'UTR-CDS Inter-chr q14.11 Transcription factor q32.3 51812 ChimerSeq STARFusion TCGA_RNA-Seq FBXW11-PIK3CA FBXW11 chr5 171295614 - PIK3CA chr3 178916538 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 3'UTR-5'UTR Inter-chr q35.1 q26.32 Oncogene 51813 ChimerSeq STARFusion TCGA_RNA-Seq FNIP1-NCOR1 FNIP1 chr5 131080257 - NCOR1 chr17 15952302 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 Out-of-frame Inter-chr q31.1 p11.2 Oncogene 51814 ChimerSeq STARFusion TCGA_RNA-Seq GALNT10-UFM1 GALNT10 chr5 153677639 + UFM1 chr13 38928376 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 In-Frame Inter-chr q33.2 q13.3 51815 ChimerSeq STARFusion TCGA_RNA-Seq GPRC5A-APOLD1 GPRC5A chr12 13044598 + APOLD1 chr12 12965195 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 5'UTR-3'UTR Intra-chr p13.1 Tumor suppressor gene p13.1 Seq+ 51816 ChimerSeq STARFusion TCGA_RNA-Seq HK2-ANKRD11 HK2 chr2 75061770 + ANKRD11 chr16 89383483 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 CDS-5'UTR Inter-chr p12 q24.3 51817 ChimerSeq STARFusion TCGA_RNA-Seq ITGAV-TRAK1 ITGAV chr2 187455250 + TRAK1 chr3 42240669 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 Out-of-frame Inter-chr q32.1 Tumor suppressor gene p22.1 Seq+ 51818 ChimerSeq STARFusion TCGA_RNA-Seq KATNAL2-LRP8 KATNAL2 chr18 44526886 + LRP8 chr1 53792664 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 5'UTR-CDS Inter-chr q21.1 p32.3 51819 ChimerSeq STARFusion TCGA_RNA-Seq LINC00893-IKBKE LINC00893 chrX 148615736 - IKBKE chr1 206666356 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 Out-of-frame Inter-chr q28 q32.1 Oncogene 51820 ChimerSeq STARFusion TCGA_RNA-Seq METAP1-IQGAP1 METAP1 chr4 99966461 + IQGAP1 chr15 91030186 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 In-Frame Inter-chr q23 q26.1 51821 ChimerSeq STARFusion TCGA_RNA-Seq MRPL54-RPL41 MRPL54 chr19 3762816 + RPL41 chr12 56511266 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 Out-of-frame Inter-chr p13.3 q13.2 51822 ChimerSeq STARFusion TCGA_RNA-Seq MTMR3-SLC2A1 MTMR3 chr22 30279348 + SLC2A1 chr1 43396877 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 5'UTR-CDS Inter-chr q12.2 p34.2 51823 ChimerSeq STARFusion TCGA_RNA-Seq NLK-FGFR1OP2 NLK chr17 26370357 + FGFR1OP2 chr12 27116275 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 Out-of-frame Inter-chr q11.2 CMGC:MAPK p11.23 51824 ChimerSeq STARFusion TCGA_RNA-Seq NR4A3-FOXP1 NR4A3 chr9 102584689 + FOXP1 chr3 71161788 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 5'UTR-CDS Inter-chr q31.1 Tumor suppressor gene Transcription factor p13 Oncogene Tumor suppressor gene Transcription factor 51825 ChimerSeq STARFusion TCGA_RNA-Seq NRF1-ZNRF2 NRF1 chr7 129367205 + ZNRF2 chr7 30363258 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 In-Frame Intra-chr q32.2 Tumor suppressor gene Transcription factor p14.3 51826 ChimerSeq STARFusion TCGA_RNA-Seq ONECUT2-SOX13 ONECUT2 chr18 55104176 + SOX13 chr1 204085635 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 In-Frame Inter-chr q21.31 Transcription factor q32.1 Transcription factor 51827 ChimerSeq STARFusion TCGA_RNA-Seq PIGQ-TFDP1 PIGQ chr16 620096 + TFDP1 chr13 114265311 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 5'UTR-5'UTR Inter-chr p13.3 q34 Transcription factor 51828 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R37-HNRNPUL1 PPP1R37 chr19 45596785 + HNRNPUL1 chr19 41774128 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 In-Frame Intra-chr q13.32 q13.2 51829 ChimerSeq STARFusion TCGA_RNA-Seq PRIMPOL-ANP32E PRIMPOL chr4 185578474 + ANP32E chr1 150195566 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 Out-of-frame Inter-chr q35.1 q21.2 51830 ChimerSeq STARFusion TCGA_RNA-Seq PSMC3-RPS3 PSMC3 chr11 47445980 - RPS3 chr11 75115098 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 Out-of-frame Intra-chr p11.2 q13.4 51831 ChimerSeq STARFusion TCGA_RNA-Seq PTDSS2-BACE2 PTDSS2 chr11 479152 + BACE2 chr21 42647298 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 In-Frame Inter-chr q22.2 51832 ChimerSeq STARFusion TCGA_RNA-Seq PTPRJ-CD82 PTPRJ chr11 48002560 + CD82 chr11 44609025 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 CDS-5'UTR Intra-chr p11.2 Tumor suppressor gene p11.2 Tumor suppressor gene 51833 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-CTCF RCC1 chr1 28834672 + CTCF chr16 67644727 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 5'UTR-5'UTR Inter-chr p35.3 q22.1 Tumor suppressor gene Transcription factor 51834 ChimerSeq STARFusion TCGA_RNA-Seq SLC38A10-MIS18A SLC38A10 chr17 79234038 - MIS18A chr21 33647207 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 In-Frame Inter-chr q25.3 q22.11 51835 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-CTCF SNHG3 chr1 28834672 + CTCF chr16 67644727 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 5'UTR-5'UTR Inter-chr p35.3 q22.1 Tumor suppressor gene Transcription factor 51836 ChimerSeq STARFusion TCGA_RNA-Seq SNHG8-ADK SNHG8 chr4 119200292 + ADK chr10 76360137 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 5'UTR-CDS Inter-chr q26 q22.2 51837 ChimerSeq STARFusion TCGA_RNA-Seq SPPL2B-LGALS9 SPPL2B chr19 2337624 + LGALS9 chr17 25972340 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 In-Frame Inter-chr p13.3 q11.2 51838 ChimerSeq STARFusion TCGA_RNA-Seq SRP19-EIF4G2 SRP19 chr5 112200225 + EIF4G2 chr11 10825750 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 In-Frame Inter-chr q22.2 p15.4 51839 ChimerSeq STARFusion TCGA_RNA-Seq TMEM38B-SET TMEM38B chr9 108457053 + SET chr9 131453449 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 In-Frame Intra-chr q31.2 q34.11 51840 ChimerSeq STARFusion TCGA_RNA-Seq TOR1AIP2-SVIL TOR1AIP2 chr1 179846828 - SVIL chr10 29777685 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 5'UTR-CDS Inter-chr q25.2 p11.23 51841 ChimerSeq STARFusion TCGA_RNA-Seq TPK1-XKR6 TPK1 chr7 144462973 - XKR6 chr8 10971602 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 Out-of-frame Inter-chr q35 p23.1 51842 ChimerSeq STARFusion TCGA_RNA-Seq TRIM11-LAD1 TRIM11 chr1 228584648 - LAD1 chr1 201342396 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 CDS-3'UTR Intra-chr q42.13 q32.1 51843 ChimerSeq STARFusion TCGA_RNA-Seq TRIM11-TNNT2 TRIM11 chr1 228584648 - TNNT2 chr1 201342396 - Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 CDS-5'UTR Intra-chr q42.13 q32.1 51844 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN15-ASAP2 TSPAN15 chr10 71244971 + ASAP2 chr2 9508554 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 In-Frame Inter-chr q22.1 p25.1 51845 ChimerSeq STARFusion TCGA_RNA-Seq UBE2G1-FCGRT UBE2G1 chr17 4210316 - FCGRT chr19 50027764 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 Out-of-frame Inter-chr p13.2 q13.33 51846 ChimerSeq STARFusion TCGA_RNA-Seq WTAPP1-DYNC2H1 WTAPP1 chr11 102703637 + DYNC2H1 chr11 102984266 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 Out-of-frame Intra-chr q22.2 q22.3 51847 ChimerSeq STARFusion TCGA_RNA-Seq YAP1-BIRC3 YAP1 chr11 102076805 + BIRC3 chr11 102192568 + Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 CDS-5'UTR Intra-chr q22.1 Tumor suppressor gene q22.2 Oncogene 51848 ChimerSeq STARFusion TCGA_RNA-Seq RAB3IP-ABTB2 RAB3IP chr12 70132811 + ABTB2 chr11 34176316 - Exonic hg19 STAD TCGA-BR-A44T-01A 20 4 5'UTR-CDS Inter-chr q15 p13 Seq+ 51849 ChimerSeq STARFusion TCGA_RNA-Seq CNOT2-PTPRR CNOT2 chr12 70672054 + PTPRR chr12 71050597 - Exonic hg19 STAD TCGA-BR-A44T-01A 12 2 Out-of-frame Intra-chr q15 q15 51850 ChimerSeq STARFusion TCGA_RNA-Seq MYL9-CD74 MYL9 chr20 35173369 + CD74 chr5 149792320 - Exonic hg19 STAD TCGA-BR-A44T-01A 4 0 Out-of-frame Inter-chr q11.23 q33.1 51851 ChimerSeq STARFusion TCGA_RNA-Seq EGR1-IGF1 EGR1 chr5 137803811 + IGF1 chr12 102793964 - Exonic hg19 STAD TCGA-BR-A44T-01A 3 0 Out-of-frame Inter-chr q31.2 Tumor suppressor gene Transcription factor q23.2 Tumor suppressor gene 51852 ChimerSeq STARFusion TCGA_RNA-Seq ELP4-CWF19L2 ELP4 chr11 31561330 + CWF19L2 chr11 107289013 - Exonic hg19 STAD TCGA-BR-A44T-01A 3 0 Out-of-frame Intra-chr p13 q22.3 51853 ChimerSeq STARFusion TCGA_RNA-Seq FDX1-SPP1 FDX1 chr11 110300919 + SPP1 chr4 88903864 + Exonic hg19 STAD TCGA-BR-A44T-01A 3 0 Out-of-frame Inter-chr q22.3 q22.1 51854 ChimerSeq STARFusion TCGA_RNA-Seq FH-ALDOA FH chr1 241675323 - ALDOA chr16 30075492 + Exonic hg19 STAD TCGA-BR-A44T-01A 3 0 Out-of-frame Inter-chr q43 Oncogene Tumor suppressor gene p11.2 51855 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-snoU13 GNB1 chr1 1716739 - snoU13 chr5 149408918 - Exonic hg19 STAD TCGA-BR-A44T-01A 3 0 Out-of-frame Inter-chr p36.33 51856 ChimerSeq STARFusion TCGA_RNA-Seq HSP90AA1-ASPH HSP90AA1 chr14 102551224 - ASPH chr8 62556548 - Exonic hg19 STAD TCGA-BR-A44T-01A 3 0 Out-of-frame Inter-chr q32.31 Oncogene q12.3 51857 ChimerSeq STARFusion TCGA_RNA-Seq ITGA9-EMP3 ITGA9 chr3 37670827 + EMP3 chr19 48828655 + Exonic hg19 STAD TCGA-BR-A44T-01A 3 0 CDS-5'UTR Inter-chr p22.2 Oncogene q13.33 51858 ChimerSeq STARFusion TCGA_RNA-Seq SEC23A-ATP5EP2 SEC23A chr14 39501132 - ATP5EP2 chr13 28519701 + Exonic hg19 STAD TCGA-BR-A44T-01A 3 0 Out-of-frame Inter-chr q21.1 q12.2 51859 ChimerSeq STARFusion TCGA_RNA-Seq TMEM136-C9orf3 TMEM136 chr11 120196077 + C9orf3 chr9 97848964 + Exonic hg19 STAD TCGA-BR-A44T-01A 3 0 5'UTR-3'UTR Inter-chr q23.3 q22.32 51860 ChimerSeq STARFusion TCGA_RNA-Seq YLPM1-PROX2 YLPM1 chr14 75322233 + PROX2 chr14 75320349 - Exonic hg19 STAD TCGA-BR-A44T-01A 3 0 Out-of-frame Intra-chr q24.3 q24.3 Transcription factor 51861 ChimerSeq STARFusion TCGA_RNA-Seq SF1-MYH11 SF1 chr11 64543970 - MYH11 chr16 15857748 - Exonic hg19 STAD TCGA-BR-A44T-01A 2 1 In-Frame Inter-chr q13.1 Oncogene 51862 ChimerSeq STARFusion TCGA_RNA-Seq BHMT2-MYH11 BHMT2 chr5 78373435 + MYH11 chr16 15847365 - Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 Out-of-frame Inter-chr q14.1 Oncogene 51863 ChimerSeq STARFusion TCGA_RNA-Seq C1orf132-MBNL1 C1orf132 chr1 208041271 - MBNL1 chr3 152132730 + Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 Out-of-frame Inter-chr q32.2 q25.1 51864 ChimerSeq STARFusion TCGA_RNA-Seq CCDC109B-LMO7 CCDC109B chr4 110481592 + LMO7 chr13 76335068 + Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 In-Frame Inter-chr q22.2 51865 ChimerSeq STARFusion TCGA_RNA-Seq CCDC12-SMC6 CCDC12 chr3 47018127 - SMC6 chr2 17906625 - Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 In-Frame Inter-chr p21.31 p24.2 51866 ChimerSeq STARFusion TCGA_RNA-Seq CD44-ABTB2 CD44 chr11 35160917 + ABTB2 chr11 34226237 - Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 In-Frame Intra-chr p13 Oncogene Tumor suppressor gene p13 51867 ChimerSeq STARFusion TCGA_RNA-Seq CEP192-GOLGA5 CEP192 chr18 13059311 + GOLGA5 chr14 93273081 + Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 Out-of-frame Inter-chr p11.21 q32.12 51868 ChimerSeq STARFusion TCGA_RNA-Seq CREBRF-ARHGEF28 CREBRF chr5 172483482 + ARHGEF28 chr5 73200047 + Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 Out-of-frame Intra-chr q35.1 q13.2 51869 ChimerSeq STARFusion TCGA_RNA-Seq DECR1-SAMD3 DECR1 chr8 91033284 + SAMD3 chr6 130505768 - Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 Out-of-frame Inter-chr q21.3 q23.1 51870 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB5-MYH9 DNAJB5 chr9 34989828 + MYH9 chr22 36718566 - Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 Out-of-frame Inter-chr p13.3 q12.3 Oncogene Tumor suppressor gene 51871 ChimerSeq STARFusion TCGA_RNA-Seq DOCK9-RBM26 DOCK9 chr13 99607689 - RBM26 chr13 79953042 - Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 Out-of-frame Intra-chr q32.3 q31.1 51872 ChimerSeq STARFusion TCGA_RNA-Seq EPHA4-TTLL4 EPHA4 chr2 222428451 - TTLL4 chr2 219602302 + Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 CDS-5'UTR Intra-chr q36.1 q35 51873 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPU-MPHOSPH8 HNRNPU chr1 245020900 - MPHOSPH8 chr13 20245346 + Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 In-Frame Inter-chr q44 q12.11 51874 ChimerSeq STARFusion TCGA_RNA-Seq HSD17B7P2-UPF2 HSD17B7P2 chr10 38647443 + UPF2 chr10 12039756 - Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 5'UTR-CDS Intra-chr p11.1 p14 51875 ChimerSeq STARFusion TCGA_RNA-Seq JMJD7-OBSCN JMJD7 chr15 42120386 + OBSCN chr1 228486155 + Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 Out-of-frame Inter-chr q15.1 q42.13 51876 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0100-MYO18A KIAA0100 chr17 26971076 - MYO18A chr17 27441115 - Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 In-Frame Intra-chr q11.2 q11.2 Oncogene Seq+ 51877 ChimerSeq STARFusion TCGA_RNA-Seq LCOR-RPL30 LCOR chr10 98667504 + RPL30 chr8 99055003 - Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 5'UTR-CDS Inter-chr q24.1 Transcription factor q22.2 Seq+ 51878 ChimerSeq STARFusion TCGA_RNA-Seq LDLRAD3-TRIM44 LDLRAD3 chr11 36120011 + TRIM44 chr11 35827908 + Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 Out-of-frame Intra-chr p13 p13 Seq+ 51879 ChimerSeq STARFusion TCGA_RNA-Seq MARK2-PLA2G16 MARK2 chr11 63607032 + PLA2G16 chr11 63342518 - Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 In-Frame Intra-chr q13.1 CAMK:CAMKL q13.1 Tumor suppressor gene 51880 ChimerSeq STARFusion TCGA_RNA-Seq MINOS1-IL6R MINOS1 chr1 19923603 + IL6R chr1 154420601 + Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 In-Frame Intra-chr p36.13 q21.3 51881 ChimerSeq STARFusion TCGA_RNA-Seq MYO1C-AP3S2 MYO1C chr17 1370536 - AP3S2 chr15 90432372 - Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 In-Frame Inter-chr p13.3 q26.1 51882 ChimerSeq STARFusion TCGA_RNA-Seq NEK4-CDKAL1 NEK4 chr3 52771602 - CDKAL1 chr6 20535582 + Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 CDS-5'UTR Inter-chr p21.1 Other:NEK p22.3 51883 ChimerSeq STARFusion TCGA_RNA-Seq NF1-SAFB2 NF1 chr17 29592357 + SAFB2 chr19 5600271 - Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 In-Frame Inter-chr q11.2 Oncogene Tumor suppressor gene p13.3 Tumor suppressor gene Transcription factor 51884 ChimerSeq STARFusion TCGA_RNA-Seq NUP210-RBCK1 NUP210 chr3 13393379 - RBCK1 chr20 407957 + Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 In-Frame Inter-chr p25.1 p13 Transcription factor Seq+ 51885 ChimerSeq STARFusion TCGA_RNA-Seq PLA2G4B-OBSCN PLA2G4B chr15 42120386 + OBSCN chr1 228486155 + Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 Out-of-frame Inter-chr q15.1 q42.13 51886 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R12C-RAC2 PPP1R12C chr19 55610152 - RAC2 chr22 37622843 - Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 Out-of-frame Inter-chr q13.42 q13.1 51887 ChimerSeq STARFusion TCGA_RNA-Seq PTPRB-MYRFL PTPRB chr12 70974816 - MYRFL chr12 70345893 + Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 Out-of-frame Intra-chr q15 q15 Transcription factor 51888 ChimerSeq STARFusion TCGA_RNA-Seq RAB22A-CLEC16A RAB22A chr20 56886178 + CLEC16A chr16 11114050 + Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 Out-of-frame Inter-chr q13.32 p13.13 51889 ChimerSeq STARFusion TCGA_RNA-Seq RB1-ITM2B RB1 chr13 48881542 + ITM2B chr13 48827944 + Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 In-Frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Seq+ 51890 ChimerSeq STARFusion TCGA_RNA-Seq SENP7-FCRL2 SENP7 chr3 101231935 - FCRL2 chr1 157738491 - Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 In-Frame Inter-chr q12.3 q23.1 51891 ChimerSeq STARFusion TCGA_RNA-Seq SLC27A4-MTMR12 SLC27A4 chr9 131107828 + MTMR12 chr5 32255874 - Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 Out-of-frame Inter-chr q34.11 p13.3 51892 ChimerSeq STARFusion TCGA_RNA-Seq SMCHD1-PPP4R1 SMCHD1 chr18 2722661 + PPP4R1 chr18 9588851 - Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 Out-of-frame Intra-chr p11.32 Tumor suppressor gene p11.22 51893 ChimerSeq STARFusion TCGA_RNA-Seq SPPL3-NOC4L SPPL3 chr12 121341648 - NOC4L chr12 132635526 + Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 Out-of-frame Intra-chr q24.31 q24.33 51894 ChimerSeq STARFusion TCGA_RNA-Seq UGP2-SFPQ UGP2 chr2 64085070 + SFPQ chr1 35643637 - Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 CDS-3'UTR Inter-chr p15 p34.3 51895 ChimerSeq STARFusion TCGA_RNA-Seq USP7-B2M USP7 chr16 9057064 - B2M chr15 45007621 + Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 In-Frame Inter-chr p13.2 Oncogene 51896 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC17-UBIAD1 ZDHHC17 chr12 77158109 + UBIAD1 chr1 11345701 + Exonic hg19 STAD TCGA-BR-A44T-01A 2 0 Out-of-frame Inter-chr q21.2 p36.22 Tumor suppressor gene 51897 ChimerSeq STARFusion TCGA_RNA-Seq IP6K2-RHOA IP6K2 chr3 48754590 - RHOA chr3 49413024 - Exonic hg19 STAD TCGA-VQ-A925-01A 238 8 5'UTR-5'UTR Intra-chr p21.31 p21.31 Oncogene Tumor suppressor gene Seq+ 51898 ChimerSeq STARFusion TCGA_RNA-Seq NCK2-MRPS9 NCK2 chr2 106361595 + MRPS9 chr2 105705442 + Exonic hg19 STAD TCGA-VQ-A925-01A 89 22 5'UTR-CDS Intra-chr q12.2 q12.1 Seq+ 51899 ChimerSeq STARFusion TCGA_RNA-Seq OBFC1-COL17A1 OBFC1 chr10 105648830 - COL17A1 chr10 105795321 - Exonic hg19 STAD TCGA-VQ-A925-01A 60 24 In-Frame Intra-chr q25.1 Seq+ 51900 ChimerSeq STARFusion TCGA_RNA-Seq SRPK1-CCND3 SRPK1 chr6 35888245 - CCND3 chr6 41908323 - Exonic hg19 STAD TCGA-VQ-A925-01A 49 43 Out-of-frame Intra-chr p21.31 CMGC:SRPK p21.1 Seq+ 51901 ChimerSeq STARFusion TCGA_RNA-Seq EHBP1-COMMD1 EHBP1 chr2 62974587 + COMMD1 chr2 62227836 + Exonic hg19 STAD TCGA-VQ-A925-01A 54 11 In-Frame Intra-chr p15 p15 Seq+ 51902 ChimerSeq STARFusion TCGA_RNA-Seq KMT2E-LHFPL3 KMT2E chr7 104654982 + LHFPL3 chr7 104377122 + Exonic hg19 STAD TCGA-VQ-A925-01A 52 12 Out-of-frame Intra-chr q22.3 q22.2 51903 ChimerSeq STARFusion TCGA_RNA-Seq SEL1L3-CCKAR SEL1L3 chr4 25759156 - CCKAR chr4 26484905 - Exonic hg19 STAD TCGA-VQ-A925-01A 53 6 Out-of-frame Intra-chr p15.2 p15.2 Seq+ 51904 ChimerSeq STARFusion TCGA_RNA-Seq AK2-MKL1 AK2 chr1 33502337 - MKL1 chr22 40859290 - Exonic hg19 STAD TCGA-VQ-A925-01A 39 20 CDS-5'UTR Inter-chr p35.1 q13.2 Seq+ 51905 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-SLC6A4 SSH2 chr17 28120912 - SLC6A4 chr17 28549933 - Exonic hg19 STAD TCGA-VQ-A925-01A 29 20 CDS-3'UTR Intra-chr q11.2 q11.2 Seq+ 51906 ChimerSeq STARFusion TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105365555 - OBFC1 chr10 105670380 - Exonic hg19 STAD TCGA-VQ-A925-01A 29 7 Out-of-frame Intra-chr q24.33 Seq+ 51907 ChimerSeq STARFusion TCGA_RNA-Seq SRPK1-CCND3 SRPK1 chr6 35888245 - CCND3 chr6 41905132 - Exonic hg19 STAD TCGA-VQ-A925-01A 20 43 Out-of-frame Intra-chr p21.31 CMGC:SRPK p21.1 Seq+ 51908 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L1-PHF20 EPB41L1 chr20 34700402 + PHF20 chr20 34430495 + Exonic hg19 STAD TCGA-VQ-A925-01A 21 8 5'UTR-CDS Intra-chr q11.23 q11.22 Transcription factor Seq+ 51909 ChimerSeq STARFusion TCGA_RNA-Seq ACOT7-PLEKHG5 ACOT7 chr1 6341162 - PLEKHG5 chr1 6556629 - Exonic hg19 STAD TCGA-VQ-A925-01A 20 4 Out-of-frame Intra-chr p36.31 p36.31 Oncogene Seq+ 51910 ChimerSeq STARFusion TCGA_RNA-Seq TMEM182-IL18R1 TMEM182 chr2 103380886 + IL18R1 chr2 102979093 + Exonic hg19 STAD TCGA-VQ-A925-01A 15 4 CDS-5'UTR Intra-chr q12.1 q12.1 Seq+ 51911 ChimerSeq STARFusion TCGA_RNA-Seq SUZ12P-EFCAB5 SUZ12P chr17 29096983 + EFCAB5 chr17 28378136 + Exonic hg19 STAD TCGA-VQ-A925-01A 14 6 Out-of-frame Intra-chr q11.2 51912 ChimerSeq STARFusion TCGA_RNA-Seq SMAD3-MAP2K5 SMAD3 chr15 67358698 + MAP2K5 chr15 67879184 + Exonic hg19 STAD TCGA-VQ-A925-01A 14 5 Out-of-frame Intra-chr q22.33 Transcription factor q23 STE:STE7 Seq+ 51913 ChimerSeq STARFusion TCGA_RNA-Seq C9orf3-HIATL1 C9orf3 chr9 97741709 + HIATL1 chr9 97177440 + Exonic hg19 STAD TCGA-VQ-A925-01A 14 3 In-Frame Intra-chr q22.32 Seq+ 51914 ChimerSeq STARFusion TCGA_RNA-Seq TRIM4-ZCWPW1 TRIM4 chr7 99516632 - ZCWPW1 chr7 100007167 - Exonic hg19 STAD TCGA-VQ-A925-01A 12 7 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 51915 ChimerSeq STARFusion TCGA_RNA-Seq PRKCA-CEP112 PRKCA chr17 64492401 + CEP112 chr17 63848152 - Exonic hg19 STAD TCGA-VQ-A925-01A 12 4 In-Frame Intra-chr q24.2 q24.1 Seq+ 51916 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-SLC6A4 SSH2 chr17 28120912 - SLC6A4 chr17 28549099 - Exonic hg19 STAD TCGA-VQ-A925-01A 3 19 CDS-3'UTR Intra-chr q11.2 q11.2 Seq+ 51917 ChimerSeq STARFusion TCGA_RNA-Seq MIB1-ANKRD29 MIB1 chr18 19285084 + ANKRD29 chr18 21181273 - Exonic hg19 STAD TCGA-CD-8526-01A 38 8 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 51918 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R12A-PAWR PPP1R12A chr12 80175595 - PAWR chr12 80014987 - Exonic hg19 STAD TCGA-CD-8526-01A 21 10 In-Frame Intra-chr q21.31 q21.2 Tumor suppressor gene 51919 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106209411 - Exonic hg19 STAD TCGA-CD-8526-01A 16 0 Out-of-frame Inter-chr q21.2 32.33 51920 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076851 + IGHG1 chr14 106209411 - Exonic hg19 STAD TCGA-CD-8526-01A 16 0 Out-of-frame Inter-chr q21.2 q32.33 51921 ChimerSeq STARFusion TCGA_RNA-Seq POLK-ANKDD1B POLK chr5 74848416 + ANKDD1B chr5 74948967 + Exonic hg19 STAD TCGA-CD-8526-01A 14 4 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 51922 ChimerSeq STARFusion TCGA_RNA-Seq AEBP2-PLEKHA5 AEBP2 chr12 19615651 + PLEKHA5 chr12 19473496 + Exonic hg19 STAD TCGA-CD-8526-01A 12 8 In-Frame Intra-chr p12.3 Transcription factor p12.3 Seq+ 51923 ChimerSeq STARFusion TCGA_RNA-Seq RNF38-ANKRD18B RNF38 chr9 36487305 - ANKRD18B chr9 33528725 + Exonic hg19 STAD TCGA-CD-8526-01A 10 5 5'UTR-CDS Intra-chr p13.2 p13.3 51924 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-SEPT14 PVT1 chr8 128806980 + SEPT14 chr7 55874951 - Exonic hg19 STAD TCGA-CD-8526-01A 10 3 5'UTR-CDS Inter-chr q24.21 p11.2 Seq+ 51925 ChimerSeq STARFusion TCGA_RNA-Seq DGCR2-SLC25A1 DGCR2 chr22 19050715 - SLC25A1 chr22 19164463 - Exonic hg19 STAD TCGA-CD-8526-01A 9 3 In-Frame Intra-chr q11.21 q11.21 Seq+ 51926 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R12A-PAWR PPP1R12A chr12 80201006 - PAWR chr12 80014987 - Exonic hg19 STAD TCGA-CD-8526-01A 6 10 Out-of-frame Intra-chr q21.31 q21.2 Tumor suppressor gene 51927 ChimerSeq STARFusion TCGA_RNA-Seq AEBP2-PLEKHA5 AEBP2 chr12 19615651 + PLEKHA5 chr12 19440407 + Exonic hg19 STAD TCGA-CD-8526-01A 6 8 In-Frame Intra-chr p12.3 Transcription factor p12.3 Seq+ 51928 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R12A-PAWR PPP1R12A chr12 80175595 - PAWR chr12 80062188 - Exonic hg19 STAD TCGA-CD-8526-01A 3 10 Out-of-frame Intra-chr q21.31 q21.2 Tumor suppressor gene 51929 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL1-ADCY9 RN7SL1 chr14 50053471 + ADCY9 chr16 4033924 - Exonic hg19 STAD TCGA-CD-8534-01A 5 0 Out-of-frame Inter-chr q21.3 p13.3 51930 ChimerSeq STARFusion TCGA_RNA-Seq LRR1-RPL15P3 LRR1 chr14 50065921 + RPL15P3 chr6 12514369 + Exonic hg19 STAD TCGA-CD-8534-01A 3 0 Out-of-frame Inter-chr q21.3 p24.1 51931 ChimerSeq STARFusion TCGA_RNA-Seq SPTLC2-STAM2 SPTLC2 chr14 78043110 - STAM2 chr2 153006743 - Exonic hg19 STAD TCGA-CD-8534-01A 3 0 In-Frame Inter-chr q24.3 q23.3 51932 ChimerSeq STARFusion TCGA_RNA-Seq ADAP1-RAB11B ADAP1 chr7 994032 - RAB11B chr19 8464747 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 In-Frame Inter-chr p22.3 p13.2 51933 ChimerSeq STARFusion TCGA_RNA-Seq AGMO-WNK2 AGMO chr7 15405139 - WNK2 chr9 96079802 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 In-Frame Inter-chr p21.2 q22.31 Tumor suppressor gene 51934 ChimerSeq STARFusion TCGA_RNA-Seq ASAH1-TRAPPC9 ASAH1 chr8 17924729 - TRAPPC9 chr8 140744445 - Exonic hg19 STAD TCGA-CD-8534-01A 2 0 In-Frame Intra-chr p22 q24.3 51935 ChimerSeq STARFusion TCGA_RNA-Seq ATP2C2-FTO ATP2C2 chr16 84432215 + FTO chr16 53967897 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 In-Frame Intra-chr q24.1 q12.2 Seq+ 51936 ChimerSeq STARFusion TCGA_RNA-Seq C15orf57-PTPRO C15orf57 chr15 40849415 - PTPRO chr12 15734613 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 Out-of-frame Inter-chr q15.1 p12.3 51937 ChimerSeq STARFusion TCGA_RNA-Seq CCDC109B-SLC39A8 CCDC109B chr4 110481592 + SLC39A8 chr4 103236987 - Exonic hg19 STAD TCGA-CD-8534-01A 2 0 In-Frame Intra-chr q24 51938 ChimerSeq STARFusion TCGA_RNA-Seq CCT2-LYZ CCT2 chr12 69980598 + LYZ chr12 69746000 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 Out-of-frame Intra-chr q15 q15 51939 ChimerSeq STARFusion TCGA_RNA-Seq CRAMP1L-PICK1 CRAMP1L chr16 1720810 + PICK1 chr22 38470314 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 In-Frame Inter-chr q13.1 51940 ChimerSeq STARFusion TCGA_RNA-Seq ELK1-PLP2 ELK1 chrX 47498294 - PLP2 chrX 49030682 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 In-Frame Intra-chr p11.23 Transcription factor p11.23 51941 ChimerSeq STARFusion TCGA_RNA-Seq EMC4-RCC2 EMC4 chr15 34520047 + RCC2 chr1 17739674 - Exonic hg19 STAD TCGA-CD-8534-01A 2 0 Out-of-frame Inter-chr q14 51942 ChimerSeq STARFusion TCGA_RNA-Seq FBXO46-DDX39B FBXO46 chr19 46234107 - DDX39B chr6 31499182 - Exonic hg19 STAD TCGA-CD-8534-01A 2 0 5'UTR-CDS Inter-chr q13.32 51943 ChimerSeq STARFusion TCGA_RNA-Seq FGD4-CMC2 FGD4 chr12 32552893 + CMC2 chr16 81031034 - Exonic hg19 STAD TCGA-CD-8534-01A 2 0 5'UTR-5'UTR Inter-chr p11.21 q23.2 51944 ChimerSeq STARFusion TCGA_RNA-Seq KDM6B-PPP1R12C KDM6B chr17 7743342 + PPP1R12C chr19 55607703 - Exonic hg19 STAD TCGA-CD-8534-01A 2 0 5'UTR-CDS Inter-chr p13.1 q13.42 51945 ChimerSeq STARFusion TCGA_RNA-Seq LLGL2-DDX42 LLGL2 chr17 73560588 + DDX42 chr17 61887873 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 In-Frame Intra-chr q25.1 q23.3 51946 ChimerSeq STARFusion TCGA_RNA-Seq METTL13-DNM3 METTL13 chr1 171783163 + DNM3 chr1 171890888 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 3'UTR-CDS Intra-chr q24.3 q24.3 51947 ChimerSeq STARFusion TCGA_RNA-Seq METTL6-PLEKHH2 METTL6 chr3 15457005 - PLEKHH2 chr2 43939364 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 Out-of-frame Inter-chr p25.1 p21 51948 ChimerSeq STARFusion TCGA_RNA-Seq MGLL-RNF13 MGLL chr3 127500632 - RNF13 chr3 149677843 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 In-Frame Intra-chr q21.3 q25.1 51949 ChimerSeq STARFusion TCGA_RNA-Seq MTUS1-FBXO38 MTUS1 chr8 17570723 - FBXO38 chr5 147812987 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 In-Frame Inter-chr p22 Tumor suppressor gene q32 51950 ChimerSeq STARFusion TCGA_RNA-Seq NDEL1-WIPF2 NDEL1 chr17 8339363 + WIPF2 chr17 38412643 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 5'UTR-5'UTR Intra-chr p13.1 q21.2 51951 ChimerSeq STARFusion TCGA_RNA-Seq NPNT-KIAA0895 NPNT chr4 106819158 + KIAA0895 chr7 36374787 - Exonic hg19 STAD TCGA-CD-8534-01A 2 0 Out-of-frame Inter-chr q24 p14.2 51952 ChimerSeq STARFusion TCGA_RNA-Seq P4HB-SLC29A2 P4HB chr17 79817057 - SLC29A2 chr11 66131895 - Exonic hg19 STAD TCGA-CD-8534-01A 2 0 Out-of-frame Inter-chr q25.3 q13.2 51953 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD1-SRSF11 PCMTD1 chr8 52758221 - SRSF11 chr1 70687295 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 CDS-5'UTR Inter-chr q11.23 p31.1 51954 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD1-TMEM56 PCMTD1 chr8 52758221 - TMEM56 chr1 95639372 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 Out-of-frame Inter-chr q11.23 p21.3 51955 ChimerSeq STARFusion TCGA_RNA-Seq PERP-ANKRD10 PERP chr6 138417491 - ANKRD10 chr13 111536140 - Exonic hg19 STAD TCGA-CD-8534-01A 2 0 In-Frame Inter-chr q23.3 q34 51956 ChimerSeq STARFusion TCGA_RNA-Seq PLCH1-RSRC1 PLCH1 chr3 155421935 - RSRC1 chr3 157839892 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 5'UTR-5'UTR Intra-chr q25.31 q25.32 51957 ChimerSeq STARFusion TCGA_RNA-Seq PPM1H-MON2 PPM1H chr12 63182006 - MON2 chr12 62877950 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 Out-of-frame Intra-chr q14.2 q14.1 51958 ChimerSeq STARFusion TCGA_RNA-Seq PTBP3-SUSD1 PTBP3 chr9 115095750 - SUSD1 chr9 114919893 - Exonic hg19 STAD TCGA-CD-8534-01A 2 0 Out-of-frame Intra-chr q32 q32 51959 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-QRSL1 PVT1 chr8 128806980 + QRSL1 chr6 107110855 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 5'UTR-CDS Inter-chr q24.21 q21 Seq+ 51960 ChimerSeq STARFusion TCGA_RNA-Seq RAB7A-ATG7 RAB7A chr3 128526514 + ATG7 chr3 11596285 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 In-Frame Intra-chr q21.3 Tumor suppressor gene p25.3 51961 ChimerSeq STARFusion TCGA_RNA-Seq RABGEF1-ZNF138 RABGEF1 chr7 66147245 + ZNF138 chr7 64291829 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 5'UTR-5'UTR Intra-chr q11.21 q11.21 Transcription factor 51962 ChimerSeq STARFusion TCGA_RNA-Seq RNF145-CLINT1 RNF145 chr5 158621724 - CLINT1 chr5 157244555 - Exonic hg19 STAD TCGA-CD-8534-01A 2 0 In-Frame Intra-chr q33.3 q33.3 51963 ChimerSeq STARFusion TCGA_RNA-Seq SLC20A2-FNTA SLC20A2 chr8 42302164 - FNTA chr8 42938261 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 Out-of-frame Intra-chr p11.21 p11.21 51964 ChimerSeq STARFusion TCGA_RNA-Seq SLC4A11-MAVS SLC4A11 chr20 3218190 - MAVS chr20 3835205 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 CDS-5'UTR Intra-chr p13 p13 51965 ChimerSeq STARFusion TCGA_RNA-Seq SPATA5L1-MSI2 SPATA5L1 chr15 45710880 + MSI2 chr17 55478740 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 In-Frame Inter-chr q21.1 q22 51966 ChimerSeq STARFusion TCGA_RNA-Seq SPATA6-FAM192A SPATA6 chr1 48918666 - FAM192A chr16 57207781 - Exonic hg19 STAD TCGA-CD-8534-01A 2 0 CDS-5'UTR Inter-chr p33 q13 51967 ChimerSeq STARFusion TCGA_RNA-Seq TAF6-FLT3LG TAF6 chr7 99716827 - FLT3LG chr19 49982166 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 5'UTR-CDS Inter-chr q22.1 q13.33 51968 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-SKIL TBL1XR1 chr3 176914909 - SKIL chr3 170077487 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 5'UTR-5'UTR Intra-chr q26.32 q26.2 Tumor suppressor gene Transcription factor 51969 ChimerSeq STARFusion TCGA_RNA-Seq TLE3-TASP1 TLE3 chr15 70386871 - TASP1 chr20 13415801 - Exonic hg19 STAD TCGA-CD-8534-01A 2 0 Out-of-frame Inter-chr q23 p12.1 51970 ChimerSeq STARFusion TCGA_RNA-Seq TPM4-TNFSF13B TPM4 chr19 16212219 + TNFSF13B chr13 108903588 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 Out-of-frame Inter-chr p13.12 q33.3 51971 ChimerSeq STARFusion TCGA_RNA-Seq TRA2A-PIAS1 TRA2A chr7 23571408 - PIAS1 chr15 68466070 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 In-Frame Inter-chr p15.3 q23 Tumor suppressor gene 51972 ChimerSeq STARFusion TCGA_RNA-Seq TUBG2-FUZ TUBG2 chr17 40812725 + FUZ chr19 50315993 - Exonic hg19 STAD TCGA-CD-8534-01A 2 0 In-Frame Inter-chr q21.2 q13.33 51973 ChimerSeq STARFusion TCGA_RNA-Seq VPS13A-SPIN1 VPS13A chr9 79792720 + SPIN1 chr9 91041297 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 CDS-5'UTR Intra-chr q21.2 q22.1 51974 ChimerSeq STARFusion TCGA_RNA-Seq WDFY1-AP1S3 WDFY1 chr2 224749365 - AP1S3 chr2 224642586 - Exonic hg19 STAD TCGA-CD-8534-01A 2 0 In-Frame Intra-chr q36.1 q36.1 51975 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND6-SNRNP35 ZFAND6 chr15 80352151 + SNRNP35 chr12 123950085 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 5'UTR-5'UTR Inter-chr q25.1 q24.31 51976 ChimerSeq STARFusion TCGA_RNA-Seq ZKSCAN1-IQGAP2 ZKSCAN1 chr7 99627998 + IQGAP2 chr5 75757395 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 In-Frame Inter-chr q22.1 Transcription factor q13.3 Tumor suppressor gene Seq+ 51977 ChimerSeq STARFusion TCGA_RNA-Seq ZNF292-CAPN8 ZNF292 chr6 87865477 + CAPN8 chr1 223718212 - Exonic hg19 STAD TCGA-CD-8534-01A 2 0 In-Frame Inter-chr q14.3 Tumor suppressor gene Transcription factor q41 51978 ChimerSeq STARFusion TCGA_RNA-Seq ZNF655-MSH3 ZNF655 chr7 99158318 + MSH3 chr5 80021272 + Exonic hg19 STAD TCGA-CD-8534-01A 2 0 Out-of-frame Inter-chr q22.1 Transcription factor q14.1 51979 ChimerSeq STARFusion TCGA_RNA-Seq USP39-VAMP8 USP39 chr2 85830204 + VAMP8 chr2 85808699 + Exonic hg19 STAD TCGA-D7-6519-01A 44 5 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 51980 ChimerSeq STARFusion TCGA_RNA-Seq F11R-PVRL4 F11R chr1 160990800 - PVRL4 chr1 161049739 - Exonic hg19 STAD TCGA-D7-6519-01A 38 3 In-Frame Intra-chr q23.3 Seq+ 51981 ChimerSeq STARFusion TCGA_RNA-Seq F11R-PVRL4 F11R chr1 160990800 - PVRL4 chr1 161049739 - Exonic hg19 STAD TCGA-D7-6519-01A 38 3 In-Frame Intra-chr q23.3 Seq+ 51982 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-GRIP1 FRS2 chr12 69925836 + GRIP1 chr12 66786596 - Exonic hg19 STAD TCGA-D7-6519-01A 22 0 5'UTR-CDS Intra-chr q15 q14.3 Seq+ 51983 ChimerSeq STARFusion TCGA_RNA-Seq BIRC6-TTC27 BIRC6 chr2 32768608 + TTC27 chr2 32891702 + Exonic hg19 STAD TCGA-D7-A4YU-01A 30 14 In-Frame Intra-chr p22.3 p22.3 Seq+ 51984 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L2-EFHD1 DIS3L2 chr2 233075115 + EFHD1 chr2 233546295 + Exonic hg19 STAD TCGA-D7-A4YU-01A 24 9 Out-of-frame Intra-chr q37.1 q37.1 Seq+ 51985 ChimerSeq STARFusion TCGA_RNA-Seq SEMA3B-ALS2CR12 SEMA3B chr3 50308911 + ALS2CR12 chr2 202154508 - Exonic hg19 STAD TCGA-D7-A4YU-01A 23 7 In-Frame Inter-chr p21.31 Tumor suppressor gene q33.1 Seq+ 51986 ChimerSeq STARFusion TCGA_RNA-Seq IMMP2L-DOCK4 IMMP2L chr7 111201907 - DOCK4 chr7 111644186 - Exonic hg19 STAD TCGA-D7-A4YU-01A 13 13 5'UTR-CDS Intra-chr q31.1 q31.1 KB Pub Seq+ 51987 ChimerSeq STARFusion TCGA_RNA-Seq KMT2D-KRT86 KMT2D chr12 49444064 - KRT86 chr12 52698728 + Exonic hg19 STAD TCGA-D7-A4YU-01A 14 3 Out-of-frame Intra-chr q13.12 Oncogene q13.13 51988 ChimerSeq STARFusion TCGA_RNA-Seq KRT86-ADARB1 KRT86 chr12 52699188 + ADARB1 chr21 46591525 + Exonic hg19 STAD TCGA-D7-A4YU-01A 9 7 CDS-5'UTR Inter-chr q13.13 q22.3 Tumor suppressor gene Seq+ 51989 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHM3-IGL@ PLEKHM3 chr2 208842169 - IGL@ chr22 23247168 + Exonic hg19 STAD TCGA-VQ-A8PO-01A 63 0 Out-of-frame Inter-chr q33.3 q11.22 51990 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHM3-IGLC3 PLEKHM3 chr2 208842169 - IGLC3 chr22 23247168 + Exonic hg19 STAD TCGA-VQ-A8PO-01A 63 0 Out-of-frame Inter-chr q33.3 q11.22 51991 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHM3-IGLJ3 PLEKHM3 chr2 208842169 - IGLJ3 chr22 23247168 + Exonic hg19 STAD TCGA-VQ-A8PO-01A 63 0 Out-of-frame Inter-chr q33.3 q11.22 51992 ChimerSeq STARFusion TCGA_RNA-Seq MYO6-SENP6 MYO6 chr6 76459140 + SENP6 chr6 76419243 + Exonic hg19 STAD TCGA-CD-5798-01A 25 1 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 51993 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-HAUS8 CEACAM5 chr19 42233234 + HAUS8 chr19 17184668 - Exonic hg19 STAD TCGA-CD-5798-01A 11 0 Out-of-frame Intra-chr q13.2 p13.11 51994 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-HAUS8 CEACAM5 chr19 42233228 + HAUS8 chr19 17184674 - Exonic hg19 STAD TCGA-CD-5798-01A 5 0 Out-of-frame Intra-chr q13.2 p13.11 51995 ChimerSeq STARFusion TCGA_RNA-Seq ALDH1B1-MURC ALDH1B1 chr9 38398420 + MURC chr9 103350049 + Exonic hg19 STAD TCGA-CD-5798-01A 3 0 Out-of-frame Intra-chr p13.1 51996 ChimerSeq STARFusion TCGA_RNA-Seq AVL9-ERC1 AVL9 chr7 32535414 + ERC1 chr12 1517315 + Exonic hg19 STAD TCGA-CD-5798-01A 3 0 In-Frame Inter-chr p14.3 51997 ChimerSeq STARFusion TCGA_RNA-Seq CAPG-CMIP CAPG chr2 85621890 - CMIP chr16 81745174 + Exonic hg19 STAD TCGA-CD-5798-01A 3 0 Out-of-frame Inter-chr p11.2 Tumor suppressor gene q23.2 51998 ChimerSeq STARFusion TCGA_RNA-Seq HCFC1R1-ACIN1 HCFC1R1 chr16 3073848 - ACIN1 chr14 23528071 - Exonic hg19 STAD TCGA-CD-5798-01A 3 0 CDS-3'UTR Inter-chr p13.3 q11.2 51999 ChimerSeq STARFusion TCGA_RNA-Seq LAMB3-DPCR1 LAMB3 chr1 209797276 - DPCR1 chr6 30916582 + Exonic hg19 STAD TCGA-CD-5798-01A 3 0 Out-of-frame Inter-chr q32.2 52000 ChimerSeq STARFusion TCGA_RNA-Seq ANXA1-TXNDC17 ANXA1 chr9 75766840 + TXNDC17 chr17 6545073 + Exonic hg19 STAD TCGA-CD-5798-01A 2 0 5'UTR-CDS Inter-chr q21.13 Tumor suppressor gene p13.1 52001 ChimerSeq STARFusion TCGA_RNA-Seq BAZ1A-ZDHHC3 BAZ1A chr14 35343698 - ZDHHC3 chr3 45000952 - Exonic hg19 STAD TCGA-CD-5798-01A 2 0 CDS-5'UTR Inter-chr q13.2 52002 ChimerSeq STARFusion TCGA_RNA-Seq CNPY3-HOOK2 CNPY3 chr6 42903408 + HOOK2 chr19 12883858 - Exonic hg19 STAD TCGA-CD-5798-01A 2 0 In-Frame Inter-chr p21.1 p13.13 52003 ChimerSeq STARFusion TCGA_RNA-Seq CRISPLD2-JAK1 CRISPLD2 chr16 84922969 + JAK1 chr1 65339206 - Exonic hg19 STAD TCGA-CD-5798-01A 2 0 In-Frame Inter-chr q24.1 p31.3 TK:JakA Oncogene 52004 ChimerSeq STARFusion TCGA_RNA-Seq CTAGE5-ZCCHC24 CTAGE5 chr14 39748741 + ZCCHC24 chr10 81154196 - Exonic hg19 STAD TCGA-CD-5798-01A 2 0 In-Frame Inter-chr q21.1 q22.3 52005 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L2-SPAG16 DIS3L2 chr2 232826475 + SPAG16 chr2 214181943 + Exonic hg19 STAD TCGA-CD-5798-01A 2 0 5'UTR-5'UTR Intra-chr q37.1 q34 52006 ChimerSeq STARFusion TCGA_RNA-Seq ERP44-PCSK5 ERP44 chr9 102768788 - PCSK5 chr9 78784620 + Exonic hg19 STAD TCGA-CD-5798-01A 2 0 In-Frame Intra-chr q31.1 q21.13 52007 ChimerSeq STARFusion TCGA_RNA-Seq ESYT2-THOC1 ESYT2 chr7 158580695 - THOC1 chr18 226901 - Exonic hg19 STAD TCGA-CD-5798-01A 2 0 In-Frame Inter-chr q36.3 p11.32 52008 ChimerSeq STARFusion TCGA_RNA-Seq FAM162A-GSK3B FAM162A chr3 122103146 + GSK3B chr3 119624699 - Exonic hg19 STAD TCGA-CD-5798-01A 2 0 In-Frame Intra-chr q21.1 q13.33 CMGC:GSK Tumor suppressor gene 52009 ChimerSeq STARFusion TCGA_RNA-Seq FAM228B-NUB1 FAM228B chr2 24318099 + NUB1 chr7 151071183 + Exonic hg19 STAD TCGA-CD-5798-01A 2 0 Out-of-frame Inter-chr p23.3 q36.1 52010 ChimerSeq STARFusion TCGA_RNA-Seq HDAC2-FYN HDAC2 chr6 114292021 - FYN chr6 111995833 - Exonic hg19 STAD TCGA-CD-5798-01A 2 0 In-Frame Intra-chr q21 q21 TK:Src 52011 ChimerSeq STARFusion TCGA_RNA-Seq IER2-NACC1 IER2 chr19 13261366 + NACC1 chr19 13246014 + Exonic hg19 STAD TCGA-CD-5798-01A 2 0 5'UTR-5'UTR Intra-chr p13.13 p13.13 52012 ChimerSeq STARFusion TCGA_RNA-Seq IPO9-SVIL IPO9 chr1 201839986 + SVIL chr10 29788192 - Exonic hg19 STAD TCGA-CD-5798-01A 2 0 In-Frame Inter-chr q32.1 p11.23 52013 ChimerSeq STARFusion TCGA_RNA-Seq LAD1-PLEKHA6 LAD1 chr1 201368397 - PLEKHA6 chr1 204243937 - Exonic hg19 STAD TCGA-CD-5798-01A 2 0 CDS-5'UTR Intra-chr q32.1 q32.1 52014 ChimerSeq STARFusion TCGA_RNA-Seq MACC1-ZMAT3 MACC1 chr7 20256922 - ZMAT3 chr3 178745600 - Exonic hg19 STAD TCGA-CD-5798-01A 2 0 5'UTR-CDS Inter-chr p21.1 q26.32 52015 ChimerSeq STARFusion TCGA_RNA-Seq MED16-CAPN8 MED16 chr19 889638 - CAPN8 chr1 223718212 - Exonic hg19 STAD TCGA-CD-5798-01A 2 0 In-Frame Inter-chr p13.3 q41 52016 ChimerSeq STARFusion TCGA_RNA-Seq PDE9A-FBXO31 PDE9A chr21 44073993 + FBXO31 chr16 87380856 - Exonic hg19 STAD TCGA-CD-5798-01A 2 0 Out-of-frame Inter-chr q22.3 q24.2 Tumor suppressor gene 52017 ChimerSeq STARFusion TCGA_RNA-Seq RPS15A-PICALM RPS15A chr16 18799385 - PICALM chr11 85689136 - Exonic hg19 STAD TCGA-CD-5798-01A 2 0 In-Frame Inter-chr p12.3 q14.2 52018 ChimerSeq STARFusion TCGA_RNA-Seq SACM1L-U2AF1 SACM1L chr3 45730989 + U2AF1 chr21 44515853 - Exonic hg19 STAD TCGA-CD-5798-01A 2 0 Out-of-frame Inter-chr p21.31 q22.3 Oncogene 52019 ChimerSeq STARFusion TCGA_RNA-Seq SERPINB6-SH3YL1 SERPINB6 chr6 2959402 - SH3YL1 chr2 230044 - Exonic hg19 STAD TCGA-CD-5798-01A 2 0 In-Frame Inter-chr p25.2 p25.3 52020 ChimerSeq STARFusion TCGA_RNA-Seq SGMS1-FAM53B SGMS1 chr10 52193236 - FAM53B chr10 126395456 - Exonic hg19 STAD TCGA-CD-5798-01A 2 0 5'UTR-5'UTR Intra-chr q11.23 Tumor suppressor gene q26.13 52021 ChimerSeq STARFusion TCGA_RNA-Seq SH3TC1-FNBP1 SH3TC1 chr4 8216307 + FNBP1 chr9 132658275 - Exonic hg19 STAD TCGA-CD-5798-01A 2 0 In-Frame Inter-chr p16.1 q34.11 52022 ChimerSeq STARFusion TCGA_RNA-Seq SPIN1-NXNL2 SPIN1 chr9 91063904 + NXNL2 chr9 91190002 + Exonic hg19 STAD TCGA-CD-5798-01A 2 0 CDS-3'UTR Intra-chr q22.1 q22.1 52023 ChimerSeq STARFusion TCGA_RNA-Seq TMEM51-NFIB TMEM51 chr1 15480450 + NFIB chr9 14307519 - Exonic hg19 STAD TCGA-CD-5798-01A 2 0 5'UTR-CDS Inter-chr p36.21 p22.3 Transcription factor 52024 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-CEP89 TMPRSS2 chr21 42860321 - CEP89 chr19 33406423 - Exonic hg19 STAD TCGA-CD-5798-01A 2 0 In-Frame Inter-chr q22.3 q13.11 Seq+ 52025 ChimerSeq STARFusion TCGA_RNA-Seq TOM1L2-RPH3AL TOM1L2 chr17 17875576 - RPH3AL chr17 177370 - Exonic hg19 STAD TCGA-CD-5798-01A 2 0 CDS-5'UTR Intra-chr p11.2 Tumor suppressor gene 52026 ChimerSeq STARFusion TCGA_RNA-Seq TTC3-STK24 TTC3 chr21 38445664 + STK24 chr13 99171727 - Exonic hg19 STAD TCGA-CD-5798-01A 2 0 5'UTR-CDS Inter-chr q22.13 q32.2 52027 ChimerSeq STARFusion TCGA_RNA-Seq VPRBP-TM4SF4 VPRBP chr3 51517735 - TM4SF4 chr3 149216509 + Exonic hg19 STAD TCGA-CD-5798-01A 2 0 In-Frame Intra-chr q25.1 52028 ChimerSeq STARFusion TCGA_RNA-Seq WDR6-SKI WDR6 chr3 49044964 + SKI chr1 2234417 + Exonic hg19 STAD TCGA-CD-5798-01A 2 0 Out-of-frame Inter-chr p21.31 p36.33 Transcription factor 52029 ChimerSeq STARFusion TCGA_RNA-Seq WNK2-SLC31A1 WNK2 chr9 96060349 + SLC31A1 chr9 116018394 + Exonic hg19 STAD TCGA-CD-5798-01A 2 0 CDS-5'UTR Intra-chr q22.31 Tumor suppressor gene q32 52030 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP26-CLDN18 ARHGAP26 chr5 142292834 + CLDN18 chr3 137750565 + Exonic hg19 STAD TCGA-B7-5816-01A 58 0 Out-of-frame Inter-chr q31.3 q22.3 Seq+ 52031 ChimerSeq STARFusion TCGA_RNA-Seq CLDN18-ARHGAP26 CLDN18 chr3 137749947 + ARHGAP26 chr5 142292764 + Exonic hg19 STAD TCGA-B7-5816-01A 12 2 In-Frame Inter-chr q22.3 q31.3 KB Pub Seq+ 52032 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-HAUS8 CEACAM5 chr19 42233228 + HAUS8 chr19 17184674 - Exonic hg19 STAD TCGA-B7-5816-01A 5 0 Out-of-frame Intra-chr q13.2 p13.11 52033 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-HAUS8 CEACAM5 chr19 42233234 + HAUS8 chr19 17184668 - Exonic hg19 STAD TCGA-B7-5816-01A 4 0 Out-of-frame Intra-chr q13.2 p13.11 52034 ChimerSeq STARFusion TCGA_RNA-Seq COL1A1-CLCN7 COL1A1 chr17 48263691 - CLCN7 chr16 1495786 - Exonic hg19 STAD TCGA-B7-5816-01A 3 0 Out-of-frame Inter-chr q21.33 Oncogene p13.3 52035 ChimerSeq STARFusion TCGA_RNA-Seq AGPS-NFE2L2 AGPS chr2 178310354 + NFE2L2 chr2 178098999 - Exonic hg19 STAD TCGA-B7-5816-01A 2 0 In-Frame Intra-chr q31.2 q31.2 Oncogene Transcription factor 52036 ChimerSeq STARFusion TCGA_RNA-Seq ASB1-HP1BP3 ASB1 chr2 239335760 + HP1BP3 chr1 21100103 - Exonic hg19 STAD TCGA-B7-5816-01A 2 0 Out-of-frame Inter-chr q37.3 p36.12 52037 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L-PIAS1 DIS3L chr15 66587479 + PIAS1 chr15 68378644 + Exonic hg19 STAD TCGA-B7-5816-01A 2 0 Out-of-frame Intra-chr q22.31 q23 Tumor suppressor gene 52038 ChimerSeq STARFusion TCGA_RNA-Seq FAM135A-SDHAP1 FAM135A chr6 71136235 + SDHAP1 chr3 195686957 - Exonic hg19 STAD TCGA-B7-5816-01A 2 0 5'UTR-3'UTR Inter-chr q13 q29 52039 ChimerSeq STARFusion TCGA_RNA-Seq PAPOLA-DDX24 PAPOLA chr14 96968937 + DDX24 chr14 94528967 - Exonic hg19 STAD TCGA-B7-5816-01A 2 0 Out-of-frame Intra-chr q32.2 52040 ChimerSeq STARFusion TCGA_RNA-Seq PDGFC-VEGFC PDGFC chr4 157891938 - VEGFC chr4 177632804 - Exonic hg19 STAD TCGA-B7-5816-01A 2 0 Out-of-frame Intra-chr q32.1 q34.3 52041 ChimerSeq STARFusion TCGA_RNA-Seq PROSC-CHMP1A PROSC chr8 37623873 + CHMP1A chr16 89713739 - Exonic hg19 STAD TCGA-B7-5816-01A 2 0 In-Frame Inter-chr q24.3 Seq+ 52042 ChimerSeq STARFusion TCGA_RNA-Seq RNF4-ANXA2 RNF4 chr4 2470985 + ANXA2 chr15 60656722 - Exonic hg19 STAD TCGA-B7-5816-01A 2 0 5'UTR-CDS Inter-chr p16.3 q22.2 52043 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A37-CHMP7 SLC25A37 chr8 23386725 + CHMP7 chr8 23112760 + Exonic hg19 STAD TCGA-B7-5816-01A 2 0 In-Frame Intra-chr p21.2 p21.3 52044 ChimerSeq STARFusion TCGA_RNA-Seq SPIDR-PRKDC SPIDR chr8 48353104 + PRKDC chr8 48686938 - Exonic hg19 STAD TCGA-B7-5816-01A 2 0 Out-of-frame Intra-chr q11.21 q11.21 Oncogene 52045 ChimerSeq STARFusion TCGA_RNA-Seq TMEM98-MYO1D TMEM98 chr17 31255255 + MYO1D chr17 30932259 - Exonic hg19 STAD TCGA-B7-5816-01A 2 0 5'UTR-CDS Intra-chr q11.2 q11.2 52046 ChimerSeq STARFusion TCGA_RNA-Seq TRIM13-GNAS TRIM13 chr13 50571899 + GNAS chr20 57478727 + Exonic hg19 STAD TCGA-B7-5816-01A 2 0 5'UTR-5'UTR Inter-chr q14.2 Tumor suppressor gene q13.32 Oncogene 52047 ChimerSeq STARFusion TCGA_RNA-Seq TVP23B-CDRT4 TVP23B chr17 18707579 + CDRT4 chr17 15343599 - Exonic hg19 STAD TCGA-B7-5816-01A 2 0 Out-of-frame Intra-chr p11.2 p12 52048 ChimerSeq STARFusion TCGA_RNA-Seq UBAP1-TPT1 UBAP1 chr9 34179238 + TPT1 chr13 45911523 - Exonic hg19 STAD TCGA-B7-5816-01A 2 0 Out-of-frame Inter-chr p13.3 q14.13 52049 ChimerSeq STARFusion TCGA_RNA-Seq UBE2Q2P2-DCTD UBE2Q2P2 chr15 82647592 + DCTD chr4 183836728 - Exonic hg19 STAD TCGA-B7-5816-01A 2 0 5'UTR-5'UTR Inter-chr q35.1 52050 ChimerSeq STARFusion TCGA_RNA-Seq GPRC5A-NRG1 GPRC5A chr12 13044598 + NRG1 chr8 32453346 + Exonic hg19 STAD TCGA-B7-A5TN-01A 64 101 5'UTR-CDS Inter-chr p13.1 Tumor suppressor gene p12 Seq+ 52051 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-SLC25A17 MKL1 chr22 40948110 - SLC25A17 chr22 41175129 - Exonic hg19 STAD TCGA-B7-A5TN-01A 13 5 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 52052 ChimerSeq STARFusion TCGA_RNA-Seq SESN1-PPIL6 SESN1 chr6 109414998 - PPIL6 chr6 109714140 - Exonic hg19 STAD TCGA-B7-A5TN-01A 14 1 Out-of-frame Intra-chr q21 q21 Seq+ 52053 ChimerSeq STARFusion TCGA_RNA-Seq KIF1C-PMS2P3 KIF1C chr17 4906137 + PMS2P3 chr7 75137189 - Exonic hg19 STAD TCGA-B7-A5TN-01A 11 6 CDS-3'UTR Inter-chr p13.2 q11.23 52054 ChimerSeq STARFusion TCGA_RNA-Seq VPS13B-OSR2 VPS13B chr8 100026163 + OSR2 chr8 99961067 + Exonic hg19 STAD TCGA-B7-A5TN-01A 11 3 5'UTR-5'UTR Intra-chr q22.2 q22.2 Transcription factor Seq+ 52055 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-LAPTM5 PUM1 chr1 31501643 - LAPTM5 chr1 31215396 - Exonic hg19 STAD TCGA-CD-A48C-01A 154 63 In-Frame Intra-chr p35.2 p35.2 Seq+ 52056 ChimerSeq STARFusion TCGA_RNA-Seq NXT2-COL4A5 NXT2 chrX 108784848 + COL4A5 chrX 107929261 + Exonic hg19 STAD TCGA-CD-A48C-01A 96 35 In-Frame Intra-chr q23 q22.3 Seq+ 52057 ChimerSeq STARFusion TCGA_RNA-Seq CACNA1C-CLEC2A CACNA1C chr12 2778201 + CLEC2A chr12 10051575 - Exonic hg19 STAD TCGA-CD-A48C-01A 50 26 CDS-3'UTR Intra-chr p13.33 p13.31 Seq+ 52058 ChimerSeq STARFusion TCGA_RNA-Seq C2CD5-SOX5 C2CD5 chr12 22606830 - SOX5 chr12 23887686 - Exonic hg19 STAD TCGA-CD-A48C-01A 19 7 Out-of-frame Intra-chr p12.1 p12.1 Transcription factor 52059 ChimerSeq STARFusion TCGA_RNA-Seq MARS-CLEC12A MARS chr12 57884427 + CLEC12A chr12 10124176 + Exonic hg19 STAD TCGA-CD-A48C-01A 10 2 Out-of-frame Intra-chr q13.3 p13.31 Seq+ 52060 ChimerSeq STARFusion TCGA_RNA-Seq MED21-GLIPR1 MED21 chr12 27181362 + GLIPR1 chr12 75874740 + Exonic hg19 STAD TCGA-CD-A48C-01A 9 2 Out-of-frame Intra-chr p11.23 q21.2 Tumor suppressor gene 52061 ChimerSeq STARFusion TCGA_RNA-Seq ATP11C-LINC00890 ATP11C chrX 139014175 - LINC00890 chrX 110755226 + Exonic hg19 STAD TCGA-CD-A48C-01A 7 4 Out-of-frame Intra-chr q27.1 q23 52062 ChimerSeq STARFusion TCGA_RNA-Seq COL1A2-Y_RNA COL1A2 chr7 94059994 + Y_RNA chr1 174991616 - Exonic hg19 STAD TCGA-CD-A48C-01A 4 0 Out-of-frame Inter-chr q21.3 52063 ChimerSeq STARFusion TCGA_RNA-Seq LAMB3-RPPH1 LAMB3 chr1 209788253 - RPPH1 chr14 20811232 - Exonic hg19 STAD TCGA-CD-A48C-01A 4 0 Out-of-frame Inter-chr q32.2 q11.2 52064 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-AVIL TBL1XR1 chr3 176738552 - AVIL chr12 58199948 - Exonic hg19 STAD TCGA-CD-A48C-01A 4 0 Out-of-frame Inter-chr q26.32 q14.1 52065 ChimerSeq STARFusion TCGA_RNA-Seq PIP4K2C-CACNA1C PIP4K2C chr12 57992994 + CACNA1C chr12 2690756 + Exonic hg19 STAD TCGA-CD-A48C-01A 3 2 Out-of-frame Intra-chr q13.3 p13.33 52066 ChimerSeq STARFusion TCGA_RNA-Seq AR-TMEM185A AR chrX 66766383 + TMEM185A chrX 148713437 - Exonic hg19 STAD TCGA-CD-A48C-01A 3 0 Out-of-frame Intra-chr q12 Oncogene Tumor suppressor gene Transcription factor q28 52067 ChimerSeq STARFusion TCGA_RNA-Seq ATF6B-MAPK6PS3 ATF6B chr6 32083129 - MAPK6PS3 chr13 42643119 - Exonic hg19 STAD TCGA-CD-A48C-01A 3 0 Out-of-frame Inter-chr Transcription factor q14.11 52068 ChimerSeq STARFusion TCGA_RNA-Seq ATOX1-TUBBP1 ATOX1 chr5 151122392 - TUBBP1 chr8 30211031 + Exonic hg19 STAD TCGA-CD-A48C-01A 3 0 Out-of-frame Inter-chr q33.1 p12 52069 ChimerSeq STARFusion TCGA_RNA-Seq CDH1-PIK3C3 CDH1 chr16 68862159 + PIK3C3 chr18 39662333 + Exonic hg19 STAD TCGA-CD-A48C-01A 3 0 Out-of-frame Inter-chr q22.1 Oncogene Tumor suppressor gene q12.3 52070 ChimerSeq STARFusion TCGA_RNA-Seq CFL1-CXCL14 CFL1 chr11 65622312 - CXCL14 chr5 134907479 - Exonic hg19 STAD TCGA-CD-A48C-01A 3 0 Out-of-frame Inter-chr q13.1 q31.1 Tumor suppressor gene 52071 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK1-POU2F1 EIF2AK1 chr7 6063471 - POU2F1 chr1 167385314 + Exonic hg19 STAD TCGA-CD-A48C-01A 3 0 Out-of-frame Inter-chr p22.1 q24.2 Transcription factor 52072 ChimerSeq STARFusion TCGA_RNA-Seq PAK6-GDI2 PAK6 chr15 40545490 + GDI2 chr10 5842668 - Exonic hg19 STAD TCGA-CD-A48C-01A 3 0 5'UTR-CDS Inter-chr q15.1 STE:STE20 p15.1 52073 ChimerSeq STARFusion TCGA_RNA-Seq RPS11-S100A11 RPS11 chr19 50002941 + S100A11 chr1 152005030 - Exonic hg19 STAD TCGA-CD-A48C-01A 3 0 Out-of-frame Inter-chr q13.33 q21.3 Tumor suppressor gene 52074 ChimerSeq STARFusion TCGA_RNA-Seq RPS15A-RHOG RPS15A chr16 18800338 - RHOG chr11 3848287 - Exonic hg19 STAD TCGA-CD-A48C-01A 3 0 Out-of-frame Inter-chr p12.3 p15.4 52075 ChimerSeq STARFusion TCGA_RNA-Seq RSPO1-ANAPC5 RSPO1 chr1 38077348 - ANAPC5 chr12 121790214 - Exonic hg19 STAD TCGA-CD-A48C-01A 3 0 Out-of-frame Inter-chr p34.3 q24.31 52076 ChimerSeq STARFusion TCGA_RNA-Seq SLC3A1-PLEKHA1 SLC3A1 chr2 44548450 + PLEKHA1 chr10 124191626 + Exonic hg19 STAD TCGA-CD-A48C-01A 3 0 Out-of-frame Inter-chr p21 q26.13 52077 ChimerSeq STARFusion TCGA_RNA-Seq SVIL-NXT2 SVIL chr10 29946898 - NXT2 chrX 108780166 + Exonic hg19 STAD TCGA-CD-A48C-01A 3 0 5'UTR-CDS Inter-chr p11.23 q23 52078 ChimerSeq STARFusion TCGA_RNA-Seq ZMYM2-PSPC1 ZMYM2 chr13 20534166 + PSPC1 chr13 20304484 - Exonic hg19 STAD TCGA-CD-A48C-01A 3 0 5'UTR-CDS Intra-chr q12.11 q12.11 52079 ChimerSeq STARFusion TCGA_RNA-Seq PIP4K2C-CACNA1C PIP4K2C chr12 57993221 + CACNA1C chr12 2690756 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 2 Out-of-frame Intra-chr q13.3 p13.33 52080 ChimerSeq STARFusion TCGA_RNA-Seq ABI2-MLLT3 ABI2 chr2 204281804 + MLLT3 chr9 20456784 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 1 In-Frame Inter-chr q33.2 Tumor suppressor gene p21.3 52081 ChimerSeq STARFusion TCGA_RNA-Seq NXT2-ALG13 NXT2 chrX 108780499 + ALG13 chrX 110954903 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 1 5'UTR-5'UTR Intra-chr q23 q23 52082 ChimerSeq STARFusion TCGA_RNA-Seq AKAP8-CHKA AKAP8 chr19 15472540 - CHKA chr11 67829501 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 Out-of-frame Inter-chr p13.12 Transcription factor q13.2 52083 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-SLC26A11 ANKRD11 chr16 89371614 - SLC26A11 chr17 78197051 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 In-Frame Inter-chr q24.3 q25.3 52084 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD28-TAF6 ANKRD28 chr3 15855747 - TAF6 chr7 99711891 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 5'UTR-5'UTR Inter-chr p25.1 q22.1 52085 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD44-SNX30 ANKRD44 chr2 197943427 - SNX30 chr9 115637449 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 CDS-3'UTR Inter-chr q33.1 q32 52086 ChimerSeq STARFusion TCGA_RNA-Seq ATF7-EXOC4 ATF7 chr12 53994737 - EXOC4 chr7 133502078 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 Out-of-frame Inter-chr q13.13 Transcription factor q33 52087 ChimerSeq STARFusion TCGA_RNA-Seq BMI1-U2SURP BMI1 chr10 22617627 + U2SURP chr3 142738811 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 In-Frame Inter-chr p12.2 q23 52088 ChimerSeq STARFusion TCGA_RNA-Seq C2CD5-PBX4 C2CD5 chr12 22696995 - PBX4 chr19 19675898 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 Out-of-frame Inter-chr p12.1 p13.11 Transcription factor 52089 ChimerSeq STARFusion TCGA_RNA-Seq CAP1-FBRSL1 CAP1 chr1 40506455 + FBRSL1 chr12 133148874 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 5'UTR-CDS Inter-chr p34.2 q24.33 52090 ChimerSeq STARFusion TCGA_RNA-Seq CLASRP-RPL30 CLASRP chr19 45543569 + RPL30 chr8 99057627 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 CDS-5'UTR Inter-chr q13.32 q22.2 52091 ChimerSeq STARFusion TCGA_RNA-Seq COA1-HAUS6 COA1 chr7 43679048 - HAUS6 chr9 19063578 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 Out-of-frame Inter-chr p13 p22.1 52092 ChimerSeq STARFusion TCGA_RNA-Seq DCUN1D1-PIH1D1 DCUN1D1 chr3 182683467 - PIH1D1 chr19 49954105 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 Out-of-frame Inter-chr q26.33 Oncogene q13.33 52093 ChimerSeq STARFusion TCGA_RNA-Seq DDX3X-SPTBN1 DDX3X chrX 41196718 + SPTBN1 chr2 54894741 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 Out-of-frame Inter-chr p11.4 Tumor suppressor gene p16.2 Tumor suppressor gene 52094 ChimerSeq STARFusion TCGA_RNA-Seq ELK1-SRSF7 ELK1 chrX 47496412 - SRSF7 chr2 38973889 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 Out-of-frame Inter-chr p11.23 Transcription factor p22.1 52095 ChimerSeq STARFusion TCGA_RNA-Seq FAM122C-LONRF3 FAM122C chrX 133963312 + LONRF3 chrX 118140084 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 Out-of-frame Intra-chr q26.3 q24 52096 ChimerSeq STARFusion TCGA_RNA-Seq FAM188A-CREM FAM188A chr10 15902205 - CREM chr10 35437296 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 Out-of-frame Intra-chr Tumor suppressor gene p11.21 Tumor suppressor gene Transcription factor 52097 ChimerSeq STARFusion TCGA_RNA-Seq FUBP3-MRPL48 FUBP3 chr9 133455151 + MRPL48 chr11 73555852 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 In-Frame Inter-chr q34.11 q13.4 52098 ChimerSeq STARFusion TCGA_RNA-Seq HOOK3-LCN2 HOOK3 chr8 42798588 + LCN2 chr9 130915379 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 In-Frame Inter-chr p11.21 Oncogene q34.11 52099 ChimerSeq STARFusion TCGA_RNA-Seq HSBP1-SNRPD2 HSBP1 chr16 83843030 + SNRPD2 chr19 46191724 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 3'UTR-CDS Inter-chr q23.3 q13.32 52100 ChimerSeq STARFusion TCGA_RNA-Seq INTS7-SDCCAG8 INTS7 chr1 212208686 - SDCCAG8 chr1 243433407 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 In-Frame Intra-chr q32.3 52101 ChimerSeq STARFusion TCGA_RNA-Seq LAMP1-MARCH6 LAMP1 chr13 113974785 + 2019_ 3_ 6_ chr5 10405670 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 Out-of-frame Inter-chr q34 Oncogene p15.2 52102 ChimerSeq STARFusion TCGA_RNA-Seq LIPC-WARS LIPC chr15 58703017 + WARS chr14 100809724 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 5'UTR-CDS Inter-chr q21.3 q32.2 52103 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-ZMYM1 MATR3 chr5 138614097 + ZMYM1 chr1 35559515 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 5'UTR-5'UTR Inter-chr q31.2 p34.3 52104 ChimerSeq STARFusion TCGA_RNA-Seq MLLT3-SOD2 MLLT3 chr9 20620653 - SOD2 chr6 160109274 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 In-Frame Inter-chr p21.3 q25.3 Tumor suppressor gene 52105 ChimerSeq STARFusion TCGA_RNA-Seq MXD1-ASAP2 MXD1 chr2 70165471 + ASAP2 chr2 9498885 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 3'UTR-CDS Intra-chr p13.3 Transcription factor p25.1 52106 ChimerSeq STARFusion TCGA_RNA-Seq MYH14-ZNF432 MYH14 chr19 50706928 + ZNF432 chr19 52538693 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 5'UTR-CDS Intra-chr q13.33 q13.41 Transcription factor 52107 ChimerSeq STARFusion TCGA_RNA-Seq MYOF-SF3B3 MYOF chr10 95241864 - SF3B3 chr16 70594372 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 Out-of-frame Inter-chr q23.33 q22.1 Seq+ 52108 ChimerSeq STARFusion TCGA_RNA-Seq NCOA3-WFDC10B NCOA3 chr20 46130763 + WFDC10B chr20 44314695 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 5'UTR-5'UTR Intra-chr q13.12 Transcription factor q13.12 52109 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH3-PAEP NOTCH3 chr19 15289634 - PAEP chr9 138457256 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 Out-of-frame Inter-chr p13.12 Oncogene Tumor suppressor gene q34.3 Tumor suppressor gene 52110 ChimerSeq STARFusion TCGA_RNA-Seq OGDH-ESF1 OGDH chr7 44664164 + ESF1 chr20 13763829 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 CDS-5'UTR Inter-chr p13 p12.1 52111 ChimerSeq STARFusion TCGA_RNA-Seq PCED1B-TMEM106C PCED1B chr12 47497978 + TMEM106C chr12 48361916 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 Out-of-frame Intra-chr q13.11 q13.11 52112 ChimerSeq STARFusion TCGA_RNA-Seq PIEZO1-ZFPM1 PIEZO1 chr16 88851309 - ZFPM1 chr16 88580795 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 In-Frame Intra-chr q24.3 q24.2 Transcription factor 52113 ChimerSeq STARFusion TCGA_RNA-Seq PRDM4-PHF12 PRDM4 chr12 108136974 - PHF12 chr17 27246293 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 In-Frame Inter-chr q23.3 Tumor suppressor gene Transcription factor q11.2 52114 ChimerSeq STARFusion TCGA_RNA-Seq PRSS12-GAS2L3 PRSS12 chr4 119203986 - GAS2L3 chr12 101011522 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 In-Frame Inter-chr q26 q23.1 52115 ChimerSeq STARFusion TCGA_RNA-Seq RABGGTB-PHF14 RABGGTB chr1 76253289 + PHF14 chr7 11150977 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 CDS-5'UTR Inter-chr p31.1 p21.3 52116 ChimerSeq STARFusion TCGA_RNA-Seq RANBP2-YWHAE RANBP2 chr2 109336134 + YWHAE chr17 1248793 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 Out-of-frame Inter-chr q13 p13.3 52117 ChimerSeq STARFusion TCGA_RNA-Seq RASSF8-CD69 RASSF8 chr12 26112081 + CD69 chr12 9909015 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 5'UTR-CDS Intra-chr p12.1 Tumor suppressor gene p13.31 52118 ChimerSeq STARFusion TCGA_RNA-Seq RHBDD2-CYP3A5 RHBDD2 chr7 75513166 + CYP3A5 chr7 99274199 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 CDS-3'UTR Intra-chr q11.23 q22.1 52119 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-OAZ1 SBNO2 chr19 1147308 - OAZ1 chr19 2271781 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 In-Frame Intra-chr p13.3 p13.3 52120 ChimerSeq STARFusion TCGA_RNA-Seq SCAF11-CLN8 SCAF11 chr12 46357890 - CLN8 chr8 1728416 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 Out-of-frame Inter-chr q12 p23.3 52121 ChimerSeq STARFusion TCGA_RNA-Seq SEC61A1-DDX46 SEC61A1 chr3 127775683 + DDX46 chr5 134113264 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 In-Frame Inter-chr q21.3 q31.1 52122 ChimerSeq STARFusion TCGA_RNA-Seq SLC22A15-ATP1A1 SLC22A15 chr1 116519335 + ATP1A1 chr1 116926636 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 In-Frame Intra-chr p13.1 p13.1 52123 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A13-EML3 SLC39A13 chr11 47436710 + EML3 chr11 62377168 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 In-Frame Intra-chr p11.2 q12.3 52124 ChimerSeq STARFusion TCGA_RNA-Seq SLIRP-EHD1 SLIRP chr14 78182222 + EHD1 chr11 64641990 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 Out-of-frame Inter-chr q24.3 q13.1 52125 ChimerSeq STARFusion TCGA_RNA-Seq SMIM7-YWHAE SMIM7 chr19 16757907 - YWHAE chr17 1248793 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 Out-of-frame Inter-chr p13.11 p13.3 52126 ChimerSeq STARFusion TCGA_RNA-Seq SMYD4-YWHAE SMYD4 chr17 1731155 - YWHAE chr17 1248793 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p13.3 52127 ChimerSeq STARFusion TCGA_RNA-Seq SNRNP70-NUCB1 SNRNP70 chr19 49593777 + NUCB1 chr19 49414406 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 In-Frame Intra-chr q13.33 q13.33 52128 ChimerSeq STARFusion TCGA_RNA-Seq SPCS2-FDFT1 SPCS2 chr11 74660444 + FDFT1 chr8 11695897 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 In-Frame Inter-chr q13.4 p23.1 52129 ChimerSeq STARFusion TCGA_RNA-Seq SQSTM1-HSPA9 SQSTM1 chr5 179238682 + HSPA9 chr5 137894346 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 5'UTR-CDS Intra-chr q35.3 q31.2 52130 ChimerSeq STARFusion TCGA_RNA-Seq SRC-ST6GALNAC2 SRC chr20 35993680 + ST6GALNAC2 chr17 74574898 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 5'UTR-CDS Inter-chr q11.23 TK:Src Oncogene q25.1 52131 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-TBCE TBL1XR1 chr3 176816254 - TBCE chr1 235599701 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 5'UTR-CDS Inter-chr q26.32 52132 ChimerSeq STARFusion TCGA_RNA-Seq TPGS2-DERA TPGS2 chr18 34385337 - DERA chr12 16185476 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 In-Frame Inter-chr q12.2 p12.3 52133 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN3-CYSTM1 TSPAN3 chr15 77348131 - CYSTM1 chr5 139574031 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 CDS-5'UTR Inter-chr q24.3 q31.3 52134 ChimerSeq STARFusion TCGA_RNA-Seq UBE2E1-MRPL48 UBE2E1 chr3 23929190 + MRPL48 chr11 73555852 + Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 In-Frame Inter-chr p24.2 q13.4 52135 ChimerSeq STARFusion TCGA_RNA-Seq UVRAG-EPSTI1 UVRAG chr11 75599947 + EPSTI1 chr13 43544806 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 Out-of-frame Inter-chr q13.5 Tumor suppressor gene q14.11 52136 ChimerSeq STARFusion TCGA_RNA-Seq WBSCR16-PDIA6 WBSCR16 chr7 74489250 - PDIA6 chr2 10933328 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 Out-of-frame Inter-chr p25.1 52137 ChimerSeq STARFusion TCGA_RNA-Seq ZNF670-TTC13 ZNF670 chr1 247241896 - TTC13 chr1 231097049 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 0 Out-of-frame Intra-chr q44 Transcription factor q42.2 52138 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125699 - CXCL16 chr17 4637313 - Exonic hg19 STAD TCGA-BR-4362-01A 7 2 Out-of-frame Inter-chr q12.2 p13.2 52139 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125718 - CXCL16 chr17 4637332 - Exonic hg19 STAD TCGA-BR-4362-01A 6 2 Out-of-frame Inter-chr q12.2 p13.2 52140 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-IGHG4 IGKC chr2 89156699 - IGHG4 chr14 106090713 - Exonic hg19 STAD TCGA-BR-4362-01A 3 2 Out-of-frame Inter-chr p11.2 52141 ChimerSeq STARFusion TCGA_RNA-Seq MED13-BRIP1 MED13 chr17 60106902 - BRIP1 chr17 59821952 - Exonic hg19 STAD TCGA-BR-4362-01A 2 1 Out-of-frame Intra-chr q23.2 q23.2 Oncogene Seq+ 52142 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L3-ZNF383 SIPA1L3 chr19 38579491 + ZNF383 chr19 37733371 + Exonic hg19 STAD TCGA-BR-4362-01A 2 0 Out-of-frame Intra-chr q13.13 q13.12 Transcription factor 52143 ChimerSeq STARFusion TCGA_RNA-Seq NUP50-C10orf11 NUP50 chr22 45567564 + C10orf11 chr10 77795766 + Exonic hg19 STAD TCGA-BR-A4IY-01A 10 2 Out-of-frame Inter-chr q13.31 Seq+ 52144 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHG1-DTNBP1 PLEKHG1 chr6 150921153 + DTNBP1 chr6 15533626 - Exonic hg19 STAD TCGA-BR-A4IY-01A 7 2 5'UTR-CDS Intra-chr q25.1 p22.3 52145 ChimerSeq STARFusion TCGA_RNA-Seq DDX60-SPOCK3 DDX60 chr4 169141806 - SPOCK3 chr4 167983688 - Exonic hg19 STAD TCGA-BR-A4IY-01A 5 0 Out-of-frame Intra-chr q32.3 q32.3 Seq+ 52146 ChimerSeq STARFusion TCGA_RNA-Seq IGHJ6-IGLL5 IGHJ6 chr14 106329413 - IGLL5 chr22 23237553 + Exonic hg19 STAD TCGA-BR-A4IY-01A 4 0 Out-of-frame Inter-chr q11.22 52147 ChimerSeq STARFusion TCGA_RNA-Seq MIR210HG-DNM3OS MIR210HG chr11 568352 - DNM3OS chr1 172113577 - Exonic hg19 STAD TCGA-BR-A4IY-01A 4 0 3'UTR-3'UTR Inter-chr p15.5 q24.3 52148 ChimerSeq STARFusion TCGA_RNA-Seq TCTE1-BGN TCTE1 chr6 44247478 - BGN chrX 152774668 + Exonic hg19 STAD TCGA-BR-A4IY-01A 4 0 Out-of-frame Inter-chr p21.1 q28 52149 ChimerSeq STARFusion TCGA_RNA-Seq PHC2-LINC01057 PHC2 chr1 33815198 - LINC01057 chr1 95145163 - Exonic hg19 STAD TCGA-BR-A4IY-01A 3 1 Out-of-frame Intra-chr p35.1 52150 ChimerSeq STARFusion TCGA_RNA-Seq SNORA67-COL1A1 SNORA67 chr17 7477636 + COL1A1 chr17 48265508 - Exonic hg19 STAD TCGA-BR-A4IY-01A 3 1 Out-of-frame Intra-chr p21.2 q21.33 Oncogene 52151 ChimerSeq STARFusion TCGA_RNA-Seq ASAP2-CPSF3 ASAP2 chr2 9347359 + CPSF3 chr2 9595788 + Exonic hg19 STAD TCGA-BR-A4IY-01A 3 0 Out-of-frame Intra-chr p25.1 p25.1 Seq+ 52152 ChimerSeq STARFusion TCGA_RNA-Seq CAND1-UQCRFS1 CAND1 chr12 67675810 + UQCRFS1 chr19 29698768 - Exonic hg19 STAD TCGA-BR-A4IY-01A 3 0 Out-of-frame Inter-chr q14.3 q12 52153 ChimerSeq STARFusion TCGA_RNA-Seq HSPBP1-GRK5 HSPBP1 chr19 55790902 - GRK5 chr10 120967223 + Exonic hg19 STAD TCGA-BR-A4IY-01A 3 0 Out-of-frame Inter-chr q13.42 q26.11 52154 ChimerSeq STARFusion TCGA_RNA-Seq MKNK2-CNDP2 MKNK2 chr19 2037605 - CNDP2 chr18 72180929 + Exonic hg19 STAD TCGA-BR-A4IY-01A 3 0 Out-of-frame Inter-chr p13.3 q22.3 Tumor suppressor gene 52155 ChimerSeq STARFusion TCGA_RNA-Seq MTMR3-EHD2 MTMR3 chr22 30423514 + EHD2 chr19 48229395 + Exonic hg19 STAD TCGA-BR-A4IY-01A 3 0 Out-of-frame Inter-chr q12.2 q13.33 52156 ChimerSeq STARFusion TCGA_RNA-Seq PBRM1-GNAS PBRM1 chr3 52597380 - GNAS chr20 57478590 + Exonic hg19 STAD TCGA-BR-A4IY-01A 3 0 Out-of-frame Inter-chr p21.1 Oncogene Tumor suppressor gene q13.32 Oncogene 52157 ChimerSeq STARFusion TCGA_RNA-Seq PLAC1-CAPZA1 PLAC1 chrX 133898264 - CAPZA1 chr1 113197087 + Exonic hg19 STAD TCGA-BR-A4IY-01A 3 0 5'UTR-CDS Inter-chr q26.3 p13.2 52158 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL3-TNFAIP2 RN7SL3 chr14 50320576 - TNFAIP2 chr14 103602910 + Exonic hg19 STAD TCGA-BR-A4IY-01A 3 0 Out-of-frame Intra-chr q21.3 q32.32 52159 ChimerSeq STARFusion TCGA_RNA-Seq RSBN1L-FLNB RSBN1L chr7 77411857 + FLNB chr3 58131643 + Exonic hg19 STAD TCGA-BR-A4IY-01A 3 0 Out-of-frame Inter-chr q11.23 p14.3 52160 ChimerSeq STARFusion TCGA_RNA-Seq SEC22A-PHEX SEC22A chr3 122978436 + PHEX chrX 22186429 + Exonic hg19 STAD TCGA-BR-A4IY-01A 3 0 In-Frame Inter-chr q21.1 p22.11 52161 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A23-MED29 SLC25A23 chr19 6440346 - MED29 chr19 39888954 + Exonic hg19 STAD TCGA-BR-A4IY-01A 3 0 Out-of-frame Intra-chr p13.3 q13.2 52162 ChimerSeq STARFusion TCGA_RNA-Seq TTLL5-APOE TTLL5 chr14 76243193 + APOE chr19 45409057 + Exonic hg19 STAD TCGA-BR-A4IY-01A 3 0 CDS-5'UTR Inter-chr q24.3 q13.32 52163 ChimerSeq STARFusion TCGA_RNA-Seq ZNF84-CEBPB ZNF84 chr12 133617965 + CEBPB chr20 48808651 + Exonic hg19 STAD TCGA-BR-A4IY-01A 3 0 Out-of-frame Inter-chr q24.33 Transcription factor q13.13 Transcription factor 52164 ChimerSeq STARFusion TCGA_RNA-Seq PHC2-LINC01057 PHC2 chr1 33799786 - LINC01057 chr1 95171113 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 1 Out-of-frame Intra-chr p35.1 52165 ChimerSeq STARFusion TCGA_RNA-Seq ACOX1-UBE2E2 ACOX1 chr17 73974615 - UBE2E2 chr3 23541099 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Inter-chr q25.1 p24.3 52166 ChimerSeq STARFusion TCGA_RNA-Seq ADIPOR2-TSPAN14 ADIPOR2 chr12 1800357 + TSPAN14 chr10 82228303 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 5'UTR-5'UTR Inter-chr p13.33 q23.1 52167 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-ENC1 ANKRD11 chr16 89484692 - ENC1 chr5 73932323 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 5'UTR-5'UTR Inter-chr q24.3 q13.3 52168 ChimerSeq STARFusion TCGA_RNA-Seq ARID3A-PTMA ARID3A chr19 932742 + PTMA chr2 232576058 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Inter-chr p13.3 Transcription factor q37.1 52169 ChimerSeq STARFusion TCGA_RNA-Seq ATXN1-SAMD3 ATXN1 chr6 16486203 - SAMD3 chr6 130505768 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 5'UTR-CDS Intra-chr p22.3 q23.1 52170 ChimerSeq STARFusion TCGA_RNA-Seq AZIN1-TGIF1 AZIN1 chr8 103876035 - TGIF1 chr18 3456352 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 5'UTR-5'UTR Inter-chr q22.3 p11.31 Transcription factor 52171 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-IFIT1 CCDC6 chr10 61612311 - IFIT1 chr10 91162038 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 Out-of-frame Intra-chr q21.2 q23.31 52172 ChimerSeq STARFusion TCGA_RNA-Seq CD46-SNHG10 CD46 chr1 207940540 + SNHG10 chr14 95999398 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 CDS-3'UTR Inter-chr q32.2 q32.13 52173 ChimerSeq STARFusion TCGA_RNA-Seq CELSR1-BTAF1 CELSR1 chr22 46829290 - BTAF1 chr10 93767880 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Inter-chr q13.31 q23.32 52174 ChimerSeq STARFusion TCGA_RNA-Seq CHN2-OGDH CHN2 chr7 29394279 + OGDH chr7 44706335 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Intra-chr p14.3 p13 52175 ChimerSeq STARFusion TCGA_RNA-Seq CHST11-TRAC CHST11 chr12 104851307 + TRAC chr14 23016447 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 Out-of-frame Inter-chr q23.3 q11.2 52176 ChimerSeq STARFusion TCGA_RNA-Seq CNOT8-HMMR CNOT8 chr5 154244945 + HMMR chr5 162900185 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Intra-chr q33.2 q34 52177 ChimerSeq STARFusion TCGA_RNA-Seq COMT-PHKB COMT chr22 19948812 + PHKB chr16 47545576 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 5'UTR-CDS Inter-chr q11.21 q12.1 52178 ChimerSeq STARFusion TCGA_RNA-Seq DCBLD1-COX4I1 DCBLD1 chr6 117825142 + COX4I1 chr16 85838543 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Inter-chr q22.1 q24.1 52179 ChimerSeq STARFusion TCGA_RNA-Seq DCBLD1-MCM9 DCBLD1 chr6 117825142 + MCM9 chr6 119177708 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Intra-chr q22.1 q22.31 Tumor suppressor gene 52180 ChimerSeq STARFusion TCGA_RNA-Seq EPC1-SKI EPC1 chr10 32635691 - SKI chr1 2234417 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Inter-chr p11.22 p36.33 Transcription factor 52181 ChimerSeq STARFusion TCGA_RNA-Seq FAM208B-TM4SF19 FAM208B chr10 5727138 + TM4SF19 chr3 196054462 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 5'UTR-5'UTR Inter-chr p15.1 q29 52182 ChimerSeq STARFusion TCGA_RNA-Seq FAM208B-TM4SF19 FAM208B chr10 5727138 + TM4SF19 chr3 196054462 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 5'UTR-5'UTR Inter-chr p15.1 q29 52183 ChimerSeq STARFusion TCGA_RNA-Seq FAM69A-ARMC8 FAM69A chr1 93426933 - ARMC8 chr3 138003273 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Inter-chr p22.1 q22.3 52184 ChimerSeq STARFusion TCGA_RNA-Seq FAM78A-PIEZO1 FAM78A chr9 134138865 - PIEZO1 chr16 88815887 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 Out-of-frame Inter-chr q34.13 q24.3 52185 ChimerSeq STARFusion TCGA_RNA-Seq FHIT-ZBTB20 FHIT chr3 61186291 - ZBTB20 chr3 114219238 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 5'UTR-5'UTR Intra-chr p14.2 Tumor suppressor gene q13.31 Transcription factor 52186 ChimerSeq STARFusion TCGA_RNA-Seq FKBP10-C3 FKBP10 chr17 39974779 + C3 chr19 6702590 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Inter-chr q21.2 p13.3 52187 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-NME2 GAS6 chr13 114535607 - NME2 chr17 49244188 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 CDS-5'UTR Inter-chr q34 Oncogene q21.33 Transcription factor 52188 ChimerSeq STARFusion TCGA_RNA-Seq GNA11-NFIC GNA11 chr19 3094785 + NFIC chr19 3381710 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 Out-of-frame Intra-chr p13.3 Oncogene p13.3 Transcription factor 52189 ChimerSeq STARFusion TCGA_RNA-Seq GRTP1-LAMP1 GRTP1 chr13 113999178 - LAMP1 chr13 113960800 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Intra-chr q34 q34 Oncogene 52190 ChimerSeq STARFusion TCGA_RNA-Seq HIGD1A-TRIM2 HIGD1A chr3 42845928 - TRIM2 chr4 154216465 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 5'UTR-CDS Inter-chr p22.1 q31.3 52191 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPR-SRRM1 HNRNPR chr1 23660011 - SRRM1 chr1 24973158 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Intra-chr p36.11 52192 ChimerSeq STARFusion TCGA_RNA-Seq IGKJ4-C3orf70 IGKJ4 chr2 89160398 - C3orf70 chr3 184801351 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 Out-of-frame Inter-chr p11.2 q27.2 52193 ChimerSeq STARFusion TCGA_RNA-Seq ING3-EHBP1 ING3 chr7 120595678 + EHBP1 chr2 63223778 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Inter-chr q31.31 Tumor suppressor gene p15 52194 ChimerSeq STARFusion TCGA_RNA-Seq IQCE-TMCO3 IQCE chr7 2613122 + TMCO3 chr13 114193672 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Inter-chr p22.3 q34 52195 ChimerSeq STARFusion TCGA_RNA-Seq KCMF1-TCF7L1 KCMF1 chr2 85198590 + TCF7L1 chr2 85361139 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Oncogene Transcription factor 52196 ChimerSeq STARFusion TCGA_RNA-Seq KCTD7-FAM115A KCTD7 chr7 66205779 + FAM115A chr7 143579192 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 Out-of-frame Intra-chr q11.21 52197 ChimerSeq STARFusion TCGA_RNA-Seq LINC00894-DIP2C LINC00894 chrX 149116612 + DIP2C chr10 415573 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 Out-of-frame Inter-chr q28 p15.3 52198 ChimerSeq STARFusion TCGA_RNA-Seq MB21D2-FGF12 MB21D2 chr3 192635419 - FGF12 chr3 192078327 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Intra-chr q29 q29 52199 ChimerSeq STARFusion TCGA_RNA-Seq MCEE-MTA3 MCEE chr2 71357310 - MTA3 chr2 42867313 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 Out-of-frame Intra-chr p13.3 p21 52200 ChimerSeq STARFusion TCGA_RNA-Seq MDFIC-PSPC1 MDFIC chr7 114582452 + PSPC1 chr13 20251963 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 CDS-3'UTR Inter-chr q31.1 q12.11 52201 ChimerSeq STARFusion TCGA_RNA-Seq MNAT1-ARID4A MNAT1 chr14 61285565 + ARID4A chr14 58785260 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 Out-of-frame Intra-chr q23.1 q23.1 52202 ChimerSeq STARFusion TCGA_RNA-Seq NAP1L4-HMGB1 NAP1L4 chr11 3013024 - HMGB1 chr13 31037831 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 5'UTR-5'UTR Inter-chr q12.3 52203 ChimerSeq STARFusion TCGA_RNA-Seq NCAPH-UTP14A NCAPH chr2 97030329 + UTP14A chrX 129053151 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Inter-chr q11.2 q26.1 52204 ChimerSeq STARFusion TCGA_RNA-Seq NDUFS8-DDB2 NDUFS8 chr11 67798200 + DDB2 chr11 47256124 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 5'UTR-CDS Intra-chr q13.2 p11.2 Oncogene Tumor suppressor gene 52205 ChimerSeq STARFusion TCGA_RNA-Seq PARP14-ATP6V0E1 PARP14 chr3 122439235 + ATP6V0E1 chr5 172421778 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 Out-of-frame Inter-chr q21.1 q35.1 52206 ChimerSeq STARFusion TCGA_RNA-Seq PCDHGB2-FBXL17 PCDHGB2 chr5 140742123 + FBXL17 chr5 107703654 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Intra-chr q31.3 q21.3 52207 ChimerSeq STARFusion TCGA_RNA-Seq PHIP-KIAA1009 PHIP chr6 79770195 - KIAA1009 chr6 84925640 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Intra-chr q14.1 52208 ChimerSeq STARFusion TCGA_RNA-Seq PIK3R5-CCDC88C PIK3R5 chr17 8868913 - CCDC88C chr14 91810001 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 5'UTR-CDS Inter-chr p13.1 q32.12 52209 ChimerSeq STARFusion TCGA_RNA-Seq PLS3-ZKSCAN1 PLS3 chrX 114795587 + ZKSCAN1 chr7 99630928 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 5'UTR-CDS Inter-chr q23 q22.1 Transcription factor 52210 ChimerSeq STARFusion TCGA_RNA-Seq RAB28-FBXO33 RAB28 chr4 13475942 - FBXO33 chr14 39871715 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 Out-of-frame Inter-chr p15.33 q21.1 52211 ChimerSeq STARFusion TCGA_RNA-Seq RABGEF1-FAM115A RABGEF1 chr7 66205779 + FAM115A chr7 143579192 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 5'UTR-5'UTR Intra-chr q11.21 52212 ChimerSeq STARFusion TCGA_RNA-Seq RNF144B-CD44 RNF144B chr6 18387861 + CD44 chr11 35250676 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 5'UTR-CDS Inter-chr p22.3 p13 Oncogene Tumor suppressor gene 52213 ChimerSeq STARFusion TCGA_RNA-Seq SCAF11-RAB6A SCAF11 chr12 46325289 - RAB6A chr11 73390765 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 Out-of-frame Inter-chr q12 q13.4 52214 ChimerSeq STARFusion TCGA_RNA-Seq SCAF8-UTRN SCAF8 chr6 155063152 + UTRN chr6 145142018 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 Out-of-frame Intra-chr q25.2 q24.2 52215 ChimerSeq STARFusion TCGA_RNA-Seq SETD5-STK39 SETD5 chr3 9439661 + STK39 chr2 169038600 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 5'UTR-CDS Inter-chr p25.3 q24.3 52216 ChimerSeq STARFusion TCGA_RNA-Seq SETDB1-CRTC2 SETDB1 chr1 150931823 + CRTC2 chr1 153925310 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Intra-chr q21.3 Transcription factor q21.3 52217 ChimerSeq STARFusion TCGA_RNA-Seq SH3TC2-HTR4 SH3TC2 chr5 148334236 - HTR4 chr5 148056798 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 Out-of-frame Intra-chr q32 q32 52218 ChimerSeq STARFusion TCGA_RNA-Seq SLC10A7-ARHGAP10 SLC10A7 chr4 147363935 - ARHGAP10 chr4 148944414 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Intra-chr q31.22 q31.23 52219 ChimerSeq STARFusion TCGA_RNA-Seq SLC35E2B-ADAP1 SLC35E2B chr1 1623888 - ADAP1 chr7 959687 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 5'UTR-CDS Inter-chr p36.33 p22.3 52220 ChimerSeq STARFusion TCGA_RNA-Seq SLC35E2B-COX19 SLC35E2B chr1 1623888 - COX19 chr7 959687 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 5'UTR-3'UTR Inter-chr p36.33 p22.3 52221 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-ARID4B SNHG3 chr1 28832596 + ARID4B chr1 235295312 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 5'UTR-3'UTR Intra-chr p35.3 q42.3 52222 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-FBXL17 SNHG3 chr1 28834672 + FBXL17 chr5 107356702 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 5'UTR-CDS Inter-chr p35.3 q21.3 52223 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-RBM34 SNHG3 chr1 28832596 + RBM34 chr1 235295312 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 5'UTR-CDS Intra-chr p35.3 q42.3 52224 ChimerSeq STARFusion TCGA_RNA-Seq SNHG5-ANKRD37 SNHG5 chr6 86387672 - ANKRD37 chr4 186317986 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 3'UTR-5'UTR Inter-chr q14.3 q35.1 52225 ChimerSeq STARFusion TCGA_RNA-Seq SOGA3-LOXL2 SOGA3 chr6 127796438 - LOXL2 chr8 23198716 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Inter-chr q22.33 p21.3 52226 ChimerSeq STARFusion TCGA_RNA-Seq SOGA3-LOXL2 SOGA3 chr6 127796438 - LOXL2 chr8 23198716 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Inter-chr q22.33 p21.3 52227 ChimerSeq STARFusion TCGA_RNA-Seq SPARC-CABP1 SPARC chr5 151051134 - CABP1 chr12 121097681 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Inter-chr q33.1 Tumor suppressor gene q24.31 52228 ChimerSeq STARFusion TCGA_RNA-Seq SREK1-GOLPH3 SREK1 chr5 65440365 + GOLPH3 chr5 32143986 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 Out-of-frame Intra-chr q12.3 p13.3 52229 ChimerSeq STARFusion TCGA_RNA-Seq STK38-FNTA STK38 chr6 36507849 - FNTA chr8 42919244 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 Out-of-frame Inter-chr p21.31 p11.21 52230 ChimerSeq STARFusion TCGA_RNA-Seq SULT1A1-DIS3L2 SULT1A1 chr16 28631384 - DIS3L2 chr2 233164750 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Inter-chr p11.2 q37.1 52231 ChimerSeq STARFusion TCGA_RNA-Seq THOC2-BRWD3 THOC2 chrX 122744769 - BRWD3 chrX 80049271 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 3'UTR-CDS Intra-chr q25 q21.1 52232 ChimerSeq STARFusion TCGA_RNA-Seq TLDC1-TRAM1 TLDC1 chr16 84538207 - TRAM1 chr8 71499234 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 Out-of-frame Inter-chr q24.1 q13.3 52233 ChimerSeq STARFusion TCGA_RNA-Seq TMEM120B-WDR66 TMEM120B chr12 122190129 + WDR66 chr12 122404861 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Intra-chr q24.31 q24.31 52234 ChimerSeq STARFusion TCGA_RNA-Seq VBP1-VAMP7 VBP1 chrX 154444852 + VAMP7 chrY 59252483 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 Out-of-frame Inter-chr q28 q28 52235 ChimerSeq STARFusion TCGA_RNA-Seq VWF-C17orf89 VWF chr12 6085277 - C17orf89 chr17 79214787 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Inter-chr p13.31 52236 ChimerSeq STARFusion TCGA_RNA-Seq WARS-PPHLN1 WARS chr14 100826891 - PPHLN1 chr12 42768665 + Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 In-Frame Inter-chr q32.2 q12 52237 ChimerSeq STARFusion TCGA_RNA-Seq ZNF638-EXOC6B ZNF638 chr2 71558995 + EXOC6B chr2 72606999 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 5'UTR-CDS Intra-chr p13.3 p13.2 Seq+ 52238 ChimerSeq STARFusion TCGA_RNA-Seq ZNF789-MEAF6 ZNF789 chr7 99070679 + MEAF6 chr1 37967597 - Exonic hg19 STAD TCGA-BR-A4IY-01A 2 0 5'UTR-CDS Inter-chr q22.1 Transcription factor p34.3 52239 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-CALD1 MALAT1 chr11 65267243 + CALD1 chr7 134618333 + Exonic hg19 STAD TCGA-BR-A4J7-01A 4 1 Out-of-frame Inter-chr q13.1 q33 52240 ChimerSeq STARFusion TCGA_RNA-Seq NFE2L1-CRTAP NFE2L1 chr17 46137449 + CRTAP chr3 33185562 + Exonic hg19 STAD TCGA-BR-A4J7-01A 3 0 Out-of-frame Inter-chr q21.32 Transcription factor p22.3 52241 ChimerSeq STARFusion TCGA_RNA-Seq SGCD-IGH@ SGCD chr5 155754244 + IGH@ chr14 106208723 - Exonic hg19 STAD TCGA-BR-A4J7-01A 3 0 Out-of-frame Inter-chr q33.2 32.33 52242 ChimerSeq STARFusion TCGA_RNA-Seq SGCD-IGHG1 SGCD chr5 155754244 + IGHG1 chr14 106208723 - Exonic hg19 STAD TCGA-BR-A4J7-01A 3 0 Out-of-frame Inter-chr q33.2 q32.33 52243 ChimerSeq STARFusion TCGA_RNA-Seq TRIM41-CSRP1 TRIM41 chr5 180651340 + CSRP1 chr1 201453775 - Exonic hg19 STAD TCGA-BR-A4J7-01A 3 0 Out-of-frame Inter-chr q35.3 q32.1 52244 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN18-ZNF213 TSPAN18 chr11 44951990 + ZNF213 chr16 3187582 + Exonic hg19 STAD TCGA-BR-A4J7-01A 3 0 Out-of-frame Inter-chr p11.2 p13.3 Transcription factor 52245 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB7A-SEC31A ZBTB7A chr19 4046407 - SEC31A chr4 83812297 - Exonic hg19 STAD TCGA-BR-A4J7-01A 3 0 Out-of-frame Inter-chr p13.3 Transcription factor q21.22 52246 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD12-FYB ANKRD12 chr18 9195696 + FYB chr5 39153706 - Exonic hg19 STAD TCGA-BR-A4J7-01A 2 0 In-Frame Inter-chr p11.22 p13.1 52247 ChimerSeq STARFusion TCGA_RNA-Seq C5orf28-PRELID2 C5orf28 chr5 43483924 - PRELID2 chr5 145176110 - Exonic hg19 STAD TCGA-BR-A4J7-01A 2 0 5'UTR-CDS Intra-chr q32 52248 ChimerSeq STARFusion TCGA_RNA-Seq DRAM1-NUP37 DRAM1 chr12 102271698 + NUP37 chr12 102494882 - Exonic hg19 STAD TCGA-BR-A4J7-01A 2 0 In-Frame Intra-chr q23.2 q23.2 52249 ChimerSeq STARFusion TCGA_RNA-Seq F11R-METTL13 F11R chr1 160990800 - METTL13 chr1 171755019 + Exonic hg19 STAD TCGA-BR-A4J7-01A 2 0 In-Frame Intra-chr q23.3 q24.3 52250 ChimerSeq STARFusion TCGA_RNA-Seq F11R-METTL13 F11R chr1 160990800 - METTL13 chr1 171755019 + Exonic hg19 STAD TCGA-BR-A4J7-01A 2 0 In-Frame Intra-chr q23.3 q24.3 52251 ChimerSeq STARFusion TCGA_RNA-Seq FGF2-AKT3 FGF2 chr4 123748507 + AKT3 chr1 243801044 - Exonic hg19 STAD TCGA-BR-A4J7-01A 2 0 Out-of-frame Inter-chr q28.1 AGC:Akt Oncogene 52252 ChimerSeq STARFusion TCGA_RNA-Seq INPP4B-CCNI INPP4B chr4 143324091 - CCNI chr4 77987558 - Exonic hg19 STAD TCGA-BR-A4J7-01A 2 0 CDS-5'UTR Intra-chr q31.21 Tumor suppressor gene q21.1 52253 ChimerSeq STARFusion TCGA_RNA-Seq ITGA9-MBNL1 ITGA9 chr3 37584076 + MBNL1 chr3 152132730 + Exonic hg19 STAD TCGA-BR-A4J7-01A 2 0 In-Frame Intra-chr p22.2 Oncogene q25.1 52254 ChimerSeq STARFusion TCGA_RNA-Seq LRBA-TAF3 LRBA chr4 151336590 - TAF3 chr10 8005883 + Exonic hg19 STAD TCGA-BR-A4J7-01A 2 0 Out-of-frame Inter-chr q31.3 p14 52255 ChimerSeq STARFusion TCGA_RNA-Seq OAZ1-ZNF775 OAZ1 chr19 2269743 + ZNF775 chr7 150104672 + Exonic hg19 STAD TCGA-BR-A4J7-01A 2 0 CDS-3'UTR Inter-chr p13.3 q36.1 Transcription factor 52256 ChimerSeq STARFusion TCGA_RNA-Seq PCNXL2-GPR137B PCNXL2 chr1 233353645 - GPR137B chr1 236332006 + Exonic hg19 STAD TCGA-BR-A4J7-01A 2 0 In-Frame Intra-chr q42.3 52257 ChimerSeq STARFusion TCGA_RNA-Seq PIGU-NCOA6 PIGU chr20 33264760 - NCOA6 chr20 33303169 - Exonic hg19 STAD TCGA-BR-A4J7-01A 2 0 In-Frame Intra-chr q11.22 q11.22 Seq+ 52258 ChimerSeq STARFusion TCGA_RNA-Seq PRKDC-ANKRD16 PRKDC chr8 48751709 - ANKRD16 chr10 5904654 - Exonic hg19 STAD TCGA-BR-A4J7-01A 2 0 CDS-3'UTR Inter-chr q11.21 Oncogene p15.1 52259 ChimerSeq STARFusion TCGA_RNA-Seq RAB2A-MTPN RAB2A chr8 61429812 + MTPN chr7 135614760 - Exonic hg19 STAD TCGA-BR-A4J7-01A 2 0 Out-of-frame Inter-chr q12.1 q33 52260 ChimerSeq STARFusion TCGA_RNA-Seq SRGAP1-VPS13C SRGAP1 chr12 64474150 + VPS13C chr15 62246753 - Exonic hg19 STAD TCGA-BR-A4J7-01A 2 0 In-Frame Inter-chr q14.2 q22.2 52261 ChimerSeq STARFusion TCGA_RNA-Seq SYNPO2-SUPT3H SYNPO2 chr4 119810296 + SUPT3H chr6 44988369 - Exonic hg19 STAD TCGA-BR-A4J7-01A 2 0 In-Frame Inter-chr q26 Tumor suppressor gene p21.1 52262 ChimerSeq STARFusion TCGA_RNA-Seq TANK-SEC31A TANK chr2 162061304 + SEC31A chr4 83745827 - Exonic hg19 STAD TCGA-BR-A4J7-01A 2 0 In-Frame Inter-chr q24.2 Tumor suppressor gene q21.22 52263 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-MED15 TNRC6B chr22 40574144 + MED15 chr22 20891404 + Exonic hg19 STAD TCGA-BR-A4J7-01A 2 0 In-Frame Intra-chr q13.1 q11.21 52264 ChimerSeq STARFusion TCGA_RNA-Seq WDR37-GTF2I WDR37 chr10 1123943 + GTF2I chr7 74171152 + Exonic hg19 STAD TCGA-BR-A4J7-01A 2 0 In-Frame Inter-chr p15.3 q11.23 Transcription factor 52265 ChimerSeq STARFusion TCGA_RNA-Seq ZNF10-BIN3 ZNF10 chr12 133707600 + BIN3 chr8 22502316 - Exonic hg19 STAD TCGA-BR-A4J7-01A 2 0 5'UTR-CDS Inter-chr q24.33 Transcription factor p21.3 52266 ChimerSeq STARFusion TCGA_RNA-Seq ZNF268-BIN3 ZNF268 chr12 133707600 + BIN3 chr8 22502316 - Exonic hg19 STAD TCGA-BR-A4J7-01A 2 0 5'UTR-CDS Inter-chr q24.33 Transcription factor p21.3 52267 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-JUP STARD3 chr17 37793484 + JUP chr17 39928114 - Exonic hg19 STAD TCGA-VQ-A91S-01A 1498 275 5'UTR-5'UTR Intra-chr q12 q21.2 Tumor suppressor gene Seq+ 52268 ChimerSeq STARFusion TCGA_RNA-Seq MED15-FKBP10 MED15 chr22 20891491 + FKBP10 chr17 39977906 + Exonic hg19 STAD TCGA-VQ-A91S-01A 986 163 Out-of-frame Inter-chr q11.21 q21.2 Seq+ 52269 ChimerSeq STARFusion TCGA_RNA-Seq SOX6-C20orf24 SOX6 chr11 16007750 - C20orf24 chr20 35238004 + Exonic hg19 STAD TCGA-VQ-A91S-01A 55 10 In-Frame Inter-chr p15.2 Transcription factor q11.23 Seq+ 52270 ChimerSeq STARFusion TCGA_RNA-Seq HNF4A-TTPAL HNF4A chr20 42984493 + TTPAL chr20 43108625 + Exonic hg19 STAD TCGA-VQ-A91S-01A 41 4 CDS-5'UTR Intra-chr q13.12 Tumor suppressor gene Transcription factor q13.12 Seq+ 52271 ChimerSeq STARFusion TCGA_RNA-Seq CEP44-SPTAN1 CEP44 chr4 175223337 + SPTAN1 chr9 131353756 + Exonic hg19 STAD TCGA-VQ-A91S-01A 21 4 In-Frame Inter-chr q34.1 q34.11 Seq+ 52272 ChimerSeq STARFusion TCGA_RNA-Seq RALGPS1-ZNF79 RALGPS1 chr9 129937061 + ZNF79 chr9 130197369 + Exonic hg19 STAD TCGA-VQ-A91S-01A 20 3 Out-of-frame Intra-chr q33.3 q33.3 Transcription factor Seq+ 52273 ChimerSeq STARFusion TCGA_RNA-Seq SDCBP2-NGFR SDCBP2 chr20 1298962 - NGFR chr17 47579425 + Exonic hg19 STAD TCGA-VQ-A91S-01A 14 1 In-Frame Inter-chr p13 q21.33 Tumor suppressor gene Seq+ 52274 ChimerSeq STARFusion TCGA_RNA-Seq NPHP4-FAM71B NPHP4 chr1 6007164 - FAM71B chr5 156590669 - Exonic hg19 STAD TCGA-VQ-A91S-01A 11 4 In-Frame Inter-chr p36.31 q33.3 Seq+ 52275 ChimerSeq STARFusion TCGA_RNA-Seq EPS8-A2M EPS8 chr12 15942095 - A2M chr12 9225467 - Exonic hg19 STAD TCGA-HU-8249-01A 13 1 5'UTR-CDS Intra-chr p12.3 p13.31 Seq+ 52276 ChimerSeq STARFusion TCGA_RNA-Seq RPL13P12-PNMA2 RPL13P12 chr17 17286669 - PNMA2 chr8 26364477 - Exonic hg19 STAD TCGA-HU-8249-01A 12 0 Out-of-frame Inter-chr p21.2 52277 ChimerSeq STARFusion TCGA_RNA-Seq SDHA-CPN2 SDHA chr5 228448 + CPN2 chr3 194060773 - Exonic hg19 STAD TCGA-HU-A4GY-01A 23 0 CDS-3'UTR Inter-chr p15.33 Oncogene Tumor suppressor gene q29 52278 ChimerSeq STARFusion TCGA_RNA-Seq BLM-SLCO3A1 BLM chr15 91260671 + SLCO3A1 chr15 92459223 + Exonic hg19 STAD TCGA-HU-A4GY-01A 8 0 5'UTR-CDS Intra-chr q26.1 Oncogene Tumor suppressor gene q26.1 52279 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-PPP6R3 DHRSX chrX 2326786 - PPP6R3 chr11 68341577 + Exonic hg19 STAD TCGA-HU-A4GY-01A 3 0 Out-of-frame Inter-chr p22.33 q13.2 Seq+ 52280 ChimerSeq STARFusion TCGA_RNA-Seq OSGIN1-COL1A1 OSGIN1 chr16 83994812 + COL1A1 chr17 48261714 - Exonic hg19 STAD TCGA-HU-A4GY-01A 3 0 Out-of-frame Inter-chr q23.3 Tumor suppressor gene q21.33 Oncogene 52281 ChimerSeq STARFusion TCGA_RNA-Seq PRDX6-EML4 PRDX6 chr1 173457934 + EML4 chr2 42488627 + Exonic hg19 STAD TCGA-HU-A4GY-01A 3 0 Out-of-frame Inter-chr q25.1 p21 Oncogene 52282 ChimerSeq STARFusion TCGA_RNA-Seq RNF144B-NUP153 RNF144B chr6 18399930 + NUP153 chr6 17649531 - Exonic hg19 STAD TCGA-HU-A4GY-01A 3 0 In-Frame Intra-chr p22.3 p22.3 52283 ChimerSeq STARFusion TCGA_RNA-Seq SLC44A4-LYZ SLC44A4 chr6 31831298 - LYZ chr12 69747548 + Exonic hg19 STAD TCGA-HU-A4GY-01A 3 0 Out-of-frame Inter-chr q15 52284 ChimerSeq STARFusion TCGA_RNA-Seq TTC3-SRF TTC3 chr21 38511021 + SRF chr6 43143450 + Exonic hg19 STAD TCGA-HU-A4GY-01A 3 0 Out-of-frame Inter-chr q22.13 p21.1 Transcription factor 52285 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-PPP6R3 DHRSX chrY 2276786 - PPP6R3 chr11 68341577 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 1 In-Frame Inter-chr p22.33 q13.2 Seq+ 52286 ChimerSeq STARFusion TCGA_RNA-Seq ADAP1-SUN1 ADAP1 chr7 959605 - SUN1 chr7 908986 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 52287 ChimerSeq STARFusion TCGA_RNA-Seq APPL1-NUP214 APPL1 chr3 57272144 + NUP214 chr9 134090599 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 In-Frame Inter-chr p14.3 q34.13 Oncogene 52288 ChimerSeq STARFusion TCGA_RNA-Seq CD48-TUBA4A CD48 chr1 160650992 - TUBA4A chr2 220116435 - Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 In-Frame Inter-chr q23.3 q35 52289 ChimerSeq STARFusion TCGA_RNA-Seq CDC42EP5-UBE2R2 CDC42EP5 chr19 54982766 - UBE2R2 chr9 33900172 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 5'UTR-CDS Inter-chr p13.3 52290 ChimerSeq STARFusion TCGA_RNA-Seq COX19-SUN1 COX19 chr7 959605 - SUN1 chr7 908986 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 3'UTR-CDS Intra-chr p22.3 p22.3 52291 ChimerSeq STARFusion TCGA_RNA-Seq DKC1-MPP1 DKC1 chrX 153991256 + MPP1 chrX 154007628 - Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 Out-of-frame Intra-chr q28 q28 52292 ChimerSeq STARFusion TCGA_RNA-Seq DLEU2-RFWD2 DLEU2 chr13 50699438 - RFWD2 chr1 176055026 - Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 3'UTR-CDS Inter-chr q14.2 Tumor suppressor gene q25.2 Tumor suppressor gene 52293 ChimerSeq STARFusion TCGA_RNA-Seq EFR3A-KLHL42 EFR3A chr8 132958880 + KLHL42 chr12 27944641 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 Out-of-frame Inter-chr q24.22 p11.22 52294 ChimerSeq STARFusion TCGA_RNA-Seq ENAH-PTEN ENAH chr1 225840388 - PTEN chr10 89720651 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 Out-of-frame Inter-chr q42.12 q23.31 Oncogene Tumor suppressor gene 52295 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-ANO2 ETV6 chr12 11803094 + ANO2 chr12 5941769 - Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 In-Frame Intra-chr p13.2 Tumor suppressor gene Transcription factor p13.31 52296 ChimerSeq STARFusion TCGA_RNA-Seq EVA1A-TROVE2 EVA1A chr2 75745182 - TROVE2 chr1 193044950 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 Out-of-frame Inter-chr p12 q31.2 52297 ChimerSeq STARFusion TCGA_RNA-Seq FAM111B-TANC1 FAM111B chr11 58877179 + TANC1 chr2 160076203 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 Out-of-frame Inter-chr q12.1 q24.2 52298 ChimerSeq STARFusion TCGA_RNA-Seq FAM49B-TMEM71 FAM49B chr8 130983189 - TMEM71 chr8 133726461 - Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 3'UTR-CDS Intra-chr q24.21 q24.22 52299 ChimerSeq STARFusion TCGA_RNA-Seq FBXL7-NNT FBXL7 chr5 15616181 + NNT chr5 43675613 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 Out-of-frame Intra-chr p15.1 p12 52300 ChimerSeq STARFusion TCGA_RNA-Seq FKBP15-PABPC1 FKBP15 chr9 115969492 - PABPC1 chr8 101715587 - Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 CDS-3'UTR Inter-chr q32 q22.3 52301 ChimerSeq STARFusion TCGA_RNA-Seq GOLGA4-ITPR2 GOLGA4 chr3 37292975 + ITPR2 chr12 26755639 - Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 In-Frame Inter-chr p22.2 p11.23 52302 ChimerSeq STARFusion TCGA_RNA-Seq IBTK-PDS5A IBTK chr6 82920531 - PDS5A chr4 39827108 - Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 Out-of-frame Inter-chr p14 52303 ChimerSeq STARFusion TCGA_RNA-Seq IL7R-LRPPRC IL7R chr5 35867565 + LRPPRC chr2 44171033 - Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 In-Frame Inter-chr p13.2 Oncogene p21 52304 ChimerSeq STARFusion TCGA_RNA-Seq LAPTM5-RPTOR LAPTM5 chr1 31230506 - RPTOR chr17 78820273 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 In-Frame Inter-chr p35.2 q25.3 52305 ChimerSeq STARFusion TCGA_RNA-Seq LRRFIP1-GNB1 LRRFIP1 chr2 238536383 + GNB1 chr1 1749314 - Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 In-Frame Inter-chr q37.3 p36.33 52306 ChimerSeq STARFusion TCGA_RNA-Seq LY75-MARCH7 LY75 chr2 160664960 - 2019_ 3_ 7_ chr2 160585520 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 Out-of-frame Intra-chr q24.2 q24.2 52307 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-PSMB1 MATR3 chr5 138629461 + PSMB1 chr6 170858201 - Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 5'UTR-CDS Inter-chr q31.2 52308 ChimerSeq STARFusion TCGA_RNA-Seq MBNL1-TOPBP1 MBNL1 chr3 151986881 + TOPBP1 chr3 133320237 - Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 5'UTR-CDS Intra-chr q25.1 q22.1 52309 ChimerSeq STARFusion TCGA_RNA-Seq NAPB-PYGB NAPB chr20 23383630 - PYGB chr20 25269061 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 In-Frame Intra-chr p11.21 p11.21 52310 ChimerSeq STARFusion TCGA_RNA-Seq NELFB-PSPC1 NELFB chr9 140150522 + PSPC1 chr13 20249124 - Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 Out-of-frame Inter-chr q34.3 q12.11 52311 ChimerSeq STARFusion TCGA_RNA-Seq NUMB-CORO1C NUMB chr14 73925199 - CORO1C chr12 109095099 - Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 5'UTR-5'UTR Inter-chr q24.3 Tumor suppressor gene q24.11 52312 ChimerSeq STARFusion TCGA_RNA-Seq OAZ1-LIMD2 OAZ1 chr19 2269743 + LIMD2 chr17 61776708 - Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 CDS-5'UTR Inter-chr p13.3 q23.3 52313 ChimerSeq STARFusion TCGA_RNA-Seq PAN3-SETDB2 PAN3 chr13 28835595 + SETDB2 chr13 50025689 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 CDS-5'UTR Intra-chr q12.2 q14.2 Transcription factor 52314 ChimerSeq STARFusion TCGA_RNA-Seq PDLIM5-CCSER1 PDLIM5 chr4 95507595 + CCSER1 chr4 91389385 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 Out-of-frame Intra-chr q22.3 q22.1 Seq+ 52315 ChimerSeq STARFusion TCGA_RNA-Seq PHF16-FAM102A PHF16 chrX 46772154 + FAM102A chr9 130716204 - Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 5'UTR-CDS Inter-chr q34.11 52316 ChimerSeq STARFusion TCGA_RNA-Seq PLAU-MPHOSPH8 PLAU chr10 75672080 + MPHOSPH8 chr13 20245346 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 Out-of-frame Inter-chr q22.2 q12.11 Seq+ 52317 ChimerSeq STARFusion TCGA_RNA-Seq PPA2-PARM1 PPA2 chr4 106291994 - PARM1 chr4 75937635 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 In-Frame Intra-chr q24 q13.3 52318 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R5E-PRKCB PPP2R5E chr14 64006247 - PRKCB chr16 24043457 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 Out-of-frame Inter-chr q23.2 p12.2 Tumor suppressor gene 52319 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF6-DDX46 RAPGEF6 chr5 130883740 - DDX46 chr5 134130540 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 In-Frame Intra-chr q31.1 q31.1 52320 ChimerSeq STARFusion TCGA_RNA-Seq RBM6-FIG4 RBM6 chr3 50036946 + FIG4 chr6 110106173 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 Out-of-frame Inter-chr p21.31 Tumor suppressor gene q21 52321 ChimerSeq STARFusion TCGA_RNA-Seq RIF1-XPO1 RIF1 chr2 152285436 + XPO1 chr2 61709674 - Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 In-Frame Intra-chr q23.3 p15 Oncogene 52322 ChimerSeq STARFusion TCGA_RNA-Seq RNF144B-FARS2 RNF144B chr6 18399930 + FARS2 chr6 5771524 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 Out-of-frame Intra-chr p22.3 p25.1 52323 ChimerSeq STARFusion TCGA_RNA-Seq SKAP1-PPA2 SKAP1 chr17 46423267 - PPA2 chr4 106320321 - Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 In-Frame Inter-chr q21.32 q24 52324 ChimerSeq STARFusion TCGA_RNA-Seq SUCLA2-ITM2B SUCLA2 chr13 48562676 - ITM2B chr13 48827944 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 In-Frame Intra-chr q14.2 q14.2 52325 ChimerSeq STARFusion TCGA_RNA-Seq TACC2-PARP14 TACC2 chr10 123781529 + PARP14 chr3 122446659 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 In-Frame Inter-chr q26.13 q21.1 52326 ChimerSeq STARFusion TCGA_RNA-Seq TACC2-TCERG1L TACC2 chr10 123810065 + TCERG1L chr10 132891581 - Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 In-Frame Intra-chr q26.13 q26.3 52327 ChimerSeq STARFusion TCGA_RNA-Seq TASP1-ESF1 TASP1 chr20 13550154 - ESF1 chr20 13699631 - Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 In-Frame Intra-chr p12.1 p12.1 Seq+ 52328 ChimerSeq STARFusion TCGA_RNA-Seq USP6NL-FAM172A USP6NL chr10 11639630 - FAM172A chr5 93388932 - Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 In-Frame Inter-chr p14 q15 Tumor suppressor gene 52329 ChimerSeq STARFusion TCGA_RNA-Seq VAV1-NFATC3 VAV1 chr19 6773022 + NFATC3 chr16 68172414 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 Out-of-frame Inter-chr p13.3 q22.1 Transcription factor 52330 ChimerSeq STARFusion TCGA_RNA-Seq XRN1-DAZAP2 XRN1 chr3 142166712 - DAZAP2 chr12 51634655 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 In-Frame Inter-chr q23 q13.13 Seq+ 52331 ChimerSeq STARFusion TCGA_RNA-Seq YWHAH-SATB1 YWHAH chr22 32340806 + SATB1 chr3 18438782 - Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 In-Frame Inter-chr q12.3 p24.3 Transcription factor 52332 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H3-PHF13 ZC3H3 chr8 144589916 - PHF13 chr1 6676817 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 Out-of-frame Inter-chr p36.31 52333 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC17-UBXN4 ZCCHC17 chr1 31792013 + UBXN4 chr2 136505837 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 In-Frame Inter-chr p35.2 q21.3 52334 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND5-TMOD3 ZFAND5 chr9 74979612 - TMOD3 chr15 52186012 + Exonic hg19 STAD TCGA-HU-A4GY-01A 2 0 5'UTR-CDS Inter-chr q21.13 q21.2 52335 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125718 - CXCL16 chr17 4637332 - Exonic hg19 STAD TCGA-BR-A4PD-01A 32 2 Out-of-frame Inter-chr q12.2 p13.2 52336 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125699 - CXCL16 chr17 4637313 - Exonic hg19 STAD TCGA-BR-A4PD-01A 31 2 Out-of-frame Inter-chr q12.2 p13.2 52337 ChimerSeq STARFusion TCGA_RNA-Seq SP3-SCRN3 SP3 chr2 174819601 - SCRN3 chr2 175287613 + Exonic hg19 STAD TCGA-BR-A4PD-01A 15 11 In-Frame Intra-chr q31.1 Transcription factor q31.1 Seq+ 52338 ChimerSeq STARFusion TCGA_RNA-Seq CERS2-SETDB1 CERS2 chr1 150938638 - SETDB1 chr1 150936006 + Exonic hg19 STAD TCGA-BR-A4PD-01A 15 3 Out-of-frame Intra-chr q21.3 q21.3 Transcription factor Seq+ 52339 ChimerSeq STARFusion TCGA_RNA-Seq SP3-MTX2 SP3 chr2 174819601 - MTX2 chr2 177161588 + Exonic hg19 STAD TCGA-BR-A4PD-01A 15 2 In-Frame Intra-chr q31.1 Transcription factor q31.1 Seq+ 52340 ChimerSeq STARFusion TCGA_RNA-Seq PMPCB-DPY19L2P2 PMPCB chr7 102944937 + DPY19L2P2 chr7 102815858 - Exonic hg19 STAD TCGA-BR-A4PD-01A 15 0 CDS-3'UTR Intra-chr q22.1 52341 ChimerSeq STARFusion TCGA_RNA-Seq MYO1B-LAMA2 MYO1B chr2 192141756 + LAMA2 chr6 129794359 + Exonic hg19 STAD TCGA-BR-A4PD-01A 11 2 Out-of-frame Inter-chr q32.3 q22.33 Seq+ 52342 ChimerSeq STARFusion TCGA_RNA-Seq ZNF227-AKAP9 ZNF227 chr19 44722005 + AKAP9 chr7 91671360 + Exonic hg19 STAD TCGA-BR-A4PD-01A 9 5 In-Frame Inter-chr q13.31 Transcription factor q21.2 Oncogene Seq+ 52343 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-SLX4 CREBBP chr16 3827614 - SLX4 chr16 3648000 - Exonic hg19 STAD TCGA-BR-A4PD-01A 10 0 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Tumor suppressor gene 52344 ChimerSeq STARFusion TCGA_RNA-Seq MTERF-SRI MTERF chr7 91509369 - SRI chr7 87848257 - Exonic hg19 STAD TCGA-BR-A4PD-01A 9 0 Out-of-frame Intra-chr q21.12 52345 ChimerSeq STARFusion TCGA_RNA-Seq ZNF227-AKAP9 ZNF227 chr19 44722005 + AKAP9 chr7 91671982 + Exonic hg19 STAD TCGA-BR-A4PD-01A 6 5 In-Frame Inter-chr q13.31 Transcription factor q21.2 Oncogene Seq+ 52346 ChimerSeq STARFusion TCGA_RNA-Seq SPIB-LYZ SPIB chr19 50933717 + LYZ chr12 69747550 + Exonic hg19 STAD TCGA-BR-A4PD-01A 5 3 Out-of-frame Inter-chr q13.33 Transcription factor q15 52347 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-SPIB LYZ chr12 69747265 + SPIB chr19 50933231 + Exonic hg19 STAD TCGA-BR-A4PD-01A 5 1 Out-of-frame Inter-chr q15 q13.33 Transcription factor 52348 ChimerSeq STARFusion TCGA_RNA-Seq PIP5K1A-VPS72 PIP5K1A chr1 151211654 + VPS72 chr1 151158426 - Exonic hg19 STAD TCGA-BR-A4PD-01A 4 1 In-Frame Intra-chr q21.3 q21.3 52349 ChimerSeq STARFusion TCGA_RNA-Seq SLC5A2-TMSB10 SLC5A2 chr16 31501078 + TMSB10 chr2 85132786 + Exonic hg19 STAD TCGA-BR-A4PD-01A 4 1 Out-of-frame Inter-chr p11.2 p11.2 52350 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-IGHG1 MALAT1 chr11 65267284 + IGHG1 chr14 106208511 - Exonic hg19 STAD TCGA-BR-A4PD-01A 3 1 Out-of-frame Inter-chr q13.1 q32.33 52351 ChimerSeq STARFusion TCGA_RNA-Seq ABCB9-DDX17 ABCB9 chr12 123465256 - DDX17 chr22 38884008 - Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr q24.31 q13.1 52352 ChimerSeq STARFusion TCGA_RNA-Seq ACACA-IGHG1 ACACA chr17 35442539 - IGHG1 chr14 106209399 - Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr q32.33 52353 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-CHMP7 ACTB chr7 5567219 - CHMP7 chr8 23119450 + Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr p22.1 p21.3 52354 ChimerSeq STARFusion TCGA_RNA-Seq AP1B1-HS3ST3B1 AP1B1 chr22 29723677 - HS3ST3B1 chr17 14249542 + Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr q12.2 p12 52355 ChimerSeq STARFusion TCGA_RNA-Seq APEH-TFF1 APEH chr3 49719208 + TFF1 chr21 43782596 - Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr p21.31 q22.3 52356 ChimerSeq STARFusion TCGA_RNA-Seq CDK14-TSPAN16 CDK14 chr7 90233563 + TSPAN16 chr19 11408818 + Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 5'UTR-CDS Inter-chr q21.13 p13.2 52357 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM6-C10orf10 CEACAM6 chr19 42270144 + C10orf10 chr10 45471899 - Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr q13.2 q11.21 52358 ChimerSeq STARFusion TCGA_RNA-Seq CERS6-FAM102A CERS6 chr2 169417832 + FAM102A chr9 130716204 - Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 In-Frame Inter-chr q24.3 q34.11 52359 ChimerSeq STARFusion TCGA_RNA-Seq CRTC1-SRPR CRTC1 chr19 18892746 + SRPR chr11 126133094 - Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr p13.11 Oncogene 52360 ChimerSeq STARFusion TCGA_RNA-Seq EEF2-B2M EEF2 chr19 3976108 - B2M chr15 45009809 + Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr p13.3 Oncogene 52361 ChimerSeq STARFusion TCGA_RNA-Seq EIF5A-COX8A EIF5A chr17 7214958 + COX8A chr11 63743883 + Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr p13.1 q13.1 52362 ChimerSeq STARFusion TCGA_RNA-Seq ELAC2-LSR ELAC2 chr17 12895793 - LSR chr19 35758250 + Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr p12 q13.12 52363 ChimerSeq STARFusion TCGA_RNA-Seq EMC8-MMACHC EMC8 chr16 85810208 - MMACHC chr1 45976734 + Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr q24.1 p34.1 52364 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L2-CEACAM6 EPB41L2 chr6 131277444 - CEACAM6 chr19 42259438 + Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr q23.2 q13.2 52365 ChimerSeq STARFusion TCGA_RNA-Seq FLNA-CHCHD10 FLNA chrX 153578194 - CHCHD10 chr22 24108369 - Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr q28 Tumor suppressor gene q11.23 52366 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-SCO2 MALAT1 chr11 65267159 + SCO2 chr22 50964742 - Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr q13.1 q13.33 52367 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-TYMP MALAT1 chr11 65267159 + TYMP chr22 50964742 - Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr q13.1 q13.33 52368 ChimerSeq STARFusion TCGA_RNA-Seq MBOAT2-BLOC1S1 MBOAT2 chr2 8997001 - BLOC1S1 chr12 56113343 + Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr p25.1 q13.2 52369 ChimerSeq STARFusion TCGA_RNA-Seq MED22-RPP14 MED22 chr9 136210122 - RPP14 chr3 58303487 + Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr p14.3 52370 ChimerSeq STARFusion TCGA_RNA-Seq MLF2-CCDC88C MLF2 chr12 6859066 - CCDC88C chr14 91779575 - Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr p13.31 q32.12 52371 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL3-IFI6 RN7SL3 chr14 50320401 - IFI6 chr1 27992764 - Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr q21.3 p35.3 52372 ChimerSeq STARFusion TCGA_RNA-Seq RNF213-PLXNB2 RNF213 chr17 78354727 + PLXNB2 chr22 50721195 - Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr q25.3 Oncogene q13.33 52373 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC2-RILPL1 SMARCC2 chr12 56563599 - RILPL1 chr12 123957229 - Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Intra-chr q13.2 q24.31 52374 ChimerSeq STARFusion TCGA_RNA-Seq SMIM13-ACTB SMIM13 chr6 11138618 + ACTB chr7 5567017 - Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr p24.2 p22.1 52375 ChimerSeq STARFusion TCGA_RNA-Seq STARD10-MTND2P28 STARD10 chr11 72492224 - MTND2P28 chr1 565941 + Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr q13.4 p36.33 52376 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-AVIL TBL1XR1 chr3 176738552 - AVIL chr12 58199948 - Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr q26.32 q14.1 52377 ChimerSeq STARFusion TCGA_RNA-Seq TFF1-CEACAM5 TFF1 chr21 43782495 - CEACAM5 chr19 42224855 + Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr q22.3 q13.2 52378 ChimerSeq STARFusion TCGA_RNA-Seq TGM2-MUC5B TGM2 chr20 36760793 - MUC5B chr11 1270986 + Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr q11.23 p15.5 52379 ChimerSeq STARFusion TCGA_RNA-Seq TSPO-MBTD1 TSPO chr22 43559236 + MBTD1 chr17 49256761 - Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr q13.2 q21.33 52380 ChimerSeq STARFusion TCGA_RNA-Seq XBP1-SUPT5H XBP1 chr22 29190794 - SUPT5H chr19 39961995 + Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr q12.1 Transcription factor q13.2 52381 ChimerSeq STARFusion TCGA_RNA-Seq ZFPL1-ZYX ZFPL1 chr11 64855497 + ZYX chr7 143078663 + Exonic hg19 STAD TCGA-BR-A4PD-01A 3 0 Out-of-frame Inter-chr q13.1 q34 Tumor suppressor gene 52382 ChimerSeq STARFusion TCGA_RNA-Seq COPS2-DTWD1 COPS2 chr15 49447722 - DTWD1 chr15 49917310 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 2 CDS-5'UTR Intra-chr q21.1 Tumor suppressor gene q21.2 52383 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD12-VAPA ANKRD12 chr18 9221997 + VAPA chr18 9931807 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Intra-chr p11.22 p11.22 52384 ChimerSeq STARFusion TCGA_RNA-Seq APBA2-SNHG14 APBA2 chr15 29288009 + SNHG14 chr15 25336737 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Intra-chr q11.2 52385 ChimerSeq STARFusion TCGA_RNA-Seq APBB1IP-WAC APBB1IP chr10 26727782 + WAC chr10 28897115 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 5'UTR-5'UTR Intra-chr p12.1 p12.1 52386 ChimerSeq STARFusion TCGA_RNA-Seq ARNTL-DYNLRB1 ARNTL chr11 13331606 + DYNLRB1 chr20 33114073 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 5'UTR-CDS Inter-chr p15.3 Tumor suppressor gene Transcription factor q11.22 52387 ChimerSeq STARFusion TCGA_RNA-Seq ARPC1B-ZSCAN25 ARPC1B chr7 98985884 + ZSCAN25 chr7 99218996 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Intra-chr q22.1 q22.1 Transcription factor 52388 ChimerSeq STARFusion TCGA_RNA-Seq ATF7IP2-SRP9 ATF7IP2 chr16 10479979 + SRP9 chr1 225965637 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 5'UTR-5'UTR Inter-chr p13.2 q42.12 52389 ChimerSeq STARFusion TCGA_RNA-Seq ATP5B-RANBP2 ATP5B chr12 57032890 - RANBP2 chr2 109400052 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Inter-chr q13.3 q13 52390 ChimerSeq STARFusion TCGA_RNA-Seq B2M-CDK2AP1 B2M chr15 45003811 + CDK2AP1 chr12 123751829 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Inter-chr Oncogene q24.31 Tumor suppressor gene 52391 ChimerSeq STARFusion TCGA_RNA-Seq BOD1-ERGIC1 BOD1 chr5 173040134 - ERGIC1 chr5 172315702 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Intra-chr q35.2 q35.1 52392 ChimerSeq STARFusion TCGA_RNA-Seq BRD2-GUSB BRD2 chr6 32938210 + GUSB chr7 65432894 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 5'UTR-CDS Inter-chr Atypical:BRD q11.21 52393 ChimerSeq STARFusion TCGA_RNA-Seq C19orf48-AKR1B1 C19orf48 chr19 51305474 - AKR1B1 chr7 134132133 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 5'UTR-CDS Inter-chr q13.33 q33 Tumor suppressor gene 52394 ChimerSeq STARFusion TCGA_RNA-Seq C1orf63-CAMTA1 C1orf63 chr1 25594231 - CAMTA1 chr1 6880241 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 5'UTR-CDS Intra-chr p36.31 Tumor suppressor gene Transcription factor 52395 ChimerSeq STARFusion TCGA_RNA-Seq C2orf69-POT1 C2orf69 chr2 200776494 + POT1 chr7 124499166 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Inter-chr q33.1 q31.33 Oncogene 52396 ChimerSeq STARFusion TCGA_RNA-Seq C7orf26-CLCN7 C7orf26 chr7 6630106 + CLCN7 chr16 1499328 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Inter-chr p22.1 p13.3 52397 ChimerSeq STARFusion TCGA_RNA-Seq C7orf63-STEAP2 C7orf63 chr7 89903424 + STEAP2 chr7 89854364 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 CDS-5'UTR Intra-chr q21.13 52398 ChimerSeq STARFusion TCGA_RNA-Seq CAPZA1-CD59 CAPZA1 chr1 113162505 + CD59 chr11 33744009 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 CDS-5'UTR Inter-chr p13.2 p13 52399 ChimerSeq STARFusion TCGA_RNA-Seq CARKD-TEX29 CARKD chr13 111267994 + TEX29 chr13 111980530 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Intra-chr q34 52400 ChimerSeq STARFusion TCGA_RNA-Seq CDC42EP5-CAPN8 CDC42EP5 chr19 54982766 - CAPN8 chr1 223718212 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 5'UTR-CDS Inter-chr q41 52401 ChimerSeq STARFusion TCGA_RNA-Seq CDK17-KCNMB4 CDK17 chr12 96793764 - KCNMB4 chr12 70824265 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 5'UTR-CDS Intra-chr q23.1 q15 52402 ChimerSeq STARFusion TCGA_RNA-Seq CLCN2-HECTD3 CLCN2 chr3 184076763 - HECTD3 chr1 45469806 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Inter-chr q27.1 p34.1 52403 ChimerSeq STARFusion TCGA_RNA-Seq CLINT1-PDLIM5 CLINT1 chr5 157285938 - PDLIM5 chr4 95376398 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 CDS-5'UTR Inter-chr q33.3 q22.3 52404 ChimerSeq STARFusion TCGA_RNA-Seq CNBP-SMARCB1 CNBP chr3 128902619 - SMARCB1 chr22 24175759 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 5'UTR-CDS Inter-chr q21.3 q11.23 Oncogene Tumor suppressor gene Seq+ 52405 ChimerSeq STARFusion TCGA_RNA-Seq COL27A1-DDX31 COL27A1 chr9 116945355 + DDX31 chr9 135470499 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Intra-chr q32 q34.13 52406 ChimerSeq STARFusion TCGA_RNA-Seq CUX1-BBS9 CUX1 chr7 101755054 + BBS9 chr7 33296848 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Intra-chr q22.1 Tumor suppressor gene Transcription factor p14.3 52407 ChimerSeq STARFusion TCGA_RNA-Seq DDX39B-MFGE8 DDX39B chr6 31500557 - MFGE8 chr15 89443042 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Inter-chr q26.1 52408 ChimerSeq STARFusion TCGA_RNA-Seq DGKZ-PHF21A DGKZ chr11 46369370 + PHF21A chr11 45975176 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Intra-chr p11.2 p11.2 Transcription factor 52409 ChimerSeq STARFusion TCGA_RNA-Seq DSN1-DIP2B DSN1 chr20 35399828 - DIP2B chr12 51089050 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Inter-chr q11.23 q13.12 52410 ChimerSeq STARFusion TCGA_RNA-Seq DYNC1H1-ZNF702P DYNC1H1 chr14 102489217 + ZNF702P chr19 53482206 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 CDS-3'UTR Inter-chr q32.31 q13.41 52411 ChimerSeq STARFusion TCGA_RNA-Seq ECE1-CAPZB ECE1 chr1 21582440 - CAPZB chr1 19746244 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Intra-chr p36.12 p36.13 52412 ChimerSeq STARFusion TCGA_RNA-Seq EMC3-CDH1 EMC3 chr3 10018641 - CDH1 chr16 68867193 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Inter-chr p25.3 q22.1 Oncogene Tumor suppressor gene 52413 ChimerSeq STARFusion TCGA_RNA-Seq EMG1-ZFPM1 EMG1 chr12 7072511 + ZFPM1 chr16 88552347 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 5'UTR-CDS Inter-chr p13.31 q24.2 Transcription factor 52414 ChimerSeq STARFusion TCGA_RNA-Seq ERLEC1-DTNB ERLEC1 chr2 54014509 + DTNB chr2 25754466 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Intra-chr p16.2 p23.3 52415 ChimerSeq STARFusion TCGA_RNA-Seq F11R-HDGF F11R chr1 160990800 - HDGF chr1 156715165 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Intra-chr q23.3 q23.1 52416 ChimerSeq STARFusion TCGA_RNA-Seq F11R-HDGF F11R chr1 160990800 - HDGF chr1 156715165 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Intra-chr q23.3 q23.1 52417 ChimerSeq STARFusion TCGA_RNA-Seq FAM118A-TTC27 FAM118A chr22 45728591 + TTC27 chr2 33042524 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Inter-chr q13.31 p22.3 52418 ChimerSeq STARFusion TCGA_RNA-Seq FBXO42-UBB FBXO42 chr1 16678750 - UBB chr17 16285216 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 5'UTR-5'UTR Inter-chr p36.13 p11.2 52419 ChimerSeq STARFusion TCGA_RNA-Seq GAK-USP21 GAK chr4 906523 - USP21 chr1 161134625 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Inter-chr p16.3 Other:NAK q23.3 52420 ChimerSeq STARFusion TCGA_RNA-Seq GARS-ETFB GARS chr7 30643188 + ETFB chr19 51857562 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Inter-chr p14.3 q13.41 52421 ChimerSeq STARFusion TCGA_RNA-Seq GPATCH8-SHISA6 GPATCH8 chr17 42552197 - SHISA6 chr17 11282731 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Intra-chr q21.31 p12 52422 ChimerSeq STARFusion TCGA_RNA-Seq GPR89C-S100A10 GPR89C chr1 145884935 + S100A10 chr1 151958727 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 5'UTR-5'UTR Intra-chr q21.3 52423 ChimerSeq STARFusion TCGA_RNA-Seq HARS2-UBE2D2 HARS2 chr5 140071341 + UBE2D2 chr5 138979957 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Intra-chr q31.3 q31.2 52424 ChimerSeq STARFusion TCGA_RNA-Seq HCG18-TRIM26 HCG18 chr6 30294131 - TRIM26 chr6 30172542 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 3'UTR-5'UTR Intra-chr Seq+ 52425 ChimerSeq STARFusion TCGA_RNA-Seq HEATR2-CASP6 HEATR2 chr7 781102 + CASP6 chr4 110619498 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Inter-chr q25 52426 ChimerSeq STARFusion TCGA_RNA-Seq HERC2-MRPS31 HERC2 chr15 28525214 - MRPS31 chr13 41303737 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Inter-chr q14.11 52427 ChimerSeq STARFusion TCGA_RNA-Seq IGF2R-TCP1 IGF2R chr6 160483651 + TCP1 chr6 160205099 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Intra-chr q25.3 Oncogene Tumor suppressor gene q25.3 52428 ChimerSeq STARFusion TCGA_RNA-Seq ITPR2-KRAS ITPR2 chr12 26703180 - KRAS chr12 25380346 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Intra-chr p11.23 p12.1 Oncogene 52429 ChimerSeq STARFusion TCGA_RNA-Seq KCTD13-ASPHD1 KCTD13 chr16 29934511 - ASPHD1 chr16 29916173 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Intra-chr p11.2 p11.2 52430 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0586-SLC38A6 KIAA0586 chr14 58899175 + SLC38A6 chr14 61512785 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Intra-chr q23.1 q23.1 52431 ChimerSeq STARFusion TCGA_RNA-Seq KLHDC10-NBPF10 KLHDC10 chr7 129710649 + NBPF10 chr1 145368441 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Inter-chr q32.2 q21.1 52432 ChimerSeq STARFusion TCGA_RNA-Seq LCLAT1-TTC27 LCLAT1 chr2 30670249 + TTC27 chr2 32983359 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 5'UTR-CDS Intra-chr p23.1 p22.3 52433 ChimerSeq STARFusion TCGA_RNA-Seq LSM4-DRAP1 LSM4 chr19 18420488 - DRAP1 chr11 65687251 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Inter-chr p13.11 q13.1 Transcription factor 52434 ChimerSeq STARFusion TCGA_RNA-Seq LSR-CAPNS1 LSR chr19 35741562 + CAPNS1 chr19 36640480 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Intra-chr q13.12 q13.12 Seq+ 52435 ChimerSeq STARFusion TCGA_RNA-Seq LSR-MTERF LSR chr19 35753595 + MTERF chr7 91456794 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 CDS-3'UTR Inter-chr q13.12 52436 ChimerSeq STARFusion TCGA_RNA-Seq LZTS3-ASPHD1 LZTS3 chr20 3154101 - ASPHD1 chr16 29930852 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Inter-chr p13 p11.2 52437 ChimerSeq STARFusion TCGA_RNA-Seq MBD2-BOD1L1 MBD2 chr18 51686135 - BOD1L1 chr4 13615285 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 3'UTR-CDS Inter-chr q21.2 Transcription factor p15.33 52438 ChimerSeq STARFusion TCGA_RNA-Seq ME1-LRCH3 ME1 chr6 84140596 - LRCH3 chr3 197541779 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Inter-chr q14.2 q29 52439 ChimerSeq STARFusion TCGA_RNA-Seq MED29-TXN MED29 chr19 39884277 + TXN chr9 113007123 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Inter-chr q13.2 q31.3 52440 ChimerSeq STARFusion TCGA_RNA-Seq MICALL2-WDR18 MICALL2 chr7 1498820 - WDR18 chr19 994019 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Inter-chr p22.3 p13.3 Seq+ 52441 ChimerSeq STARFusion TCGA_RNA-Seq MLPH-TAOK1 MLPH chr2 238419744 + TAOK1 chr17 27778473 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 CDS-5'UTR Inter-chr q37.3 q11.2 52442 ChimerSeq STARFusion TCGA_RNA-Seq NAA16-RGCC NAA16 chr13 41885718 + RGCC chr13 42040959 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Intra-chr q14.11 q14.11 52443 ChimerSeq STARFusion TCGA_RNA-Seq NAA25-PRKAR1B NAA25 chr12 112471037 - PRKAR1B chr7 720363 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Inter-chr q24.13 p22.3 52444 ChimerSeq STARFusion TCGA_RNA-Seq NARS-DAXX NARS chr18 55269587 - DAXX chr6 33288237 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Inter-chr q21.31 Oncogene 52445 ChimerSeq STARFusion TCGA_RNA-Seq NCAM2-RPS27A NCAM2 chr21 22849792 + RPS27A chr2 55459944 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 CDS-5'UTR Inter-chr q21.1 Tumor suppressor gene p16.1 52446 ChimerSeq STARFusion TCGA_RNA-Seq NCOA7-RNF146 NCOA7 chr6 126136550 + RNF146 chr6 127601376 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 5'UTR-5'UTR Intra-chr q22.31 q22.33 52447 ChimerSeq STARFusion TCGA_RNA-Seq NDC80-HIF1A NDC80 chr18 2577356 + HIF1A chr14 62211423 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Inter-chr p11.32 q23.2 Oncogene Tumor suppressor gene Transcription factor 52448 ChimerSeq STARFusion TCGA_RNA-Seq NDUFB5-H2AFV NDUFB5 chr3 179322727 + H2AFV chr7 44874161 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Inter-chr q26.33 p13 52449 ChimerSeq STARFusion TCGA_RNA-Seq NFATC2-ATP9A NFATC2 chr20 50071085 - ATP9A chr20 50292747 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Intra-chr q13.2 Tumor suppressor gene Transcription factor q13.2 52450 ChimerSeq STARFusion TCGA_RNA-Seq PARD3-WAPAL PARD3 chr10 35103804 - WAPAL chr10 88206206 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Intra-chr p11.21 Seq+ 52451 ChimerSeq STARFusion TCGA_RNA-Seq PDE1A-FRZB PDE1A chr2 183291305 - FRZB chr2 183707271 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Intra-chr q32.1 q32.1 52452 ChimerSeq STARFusion TCGA_RNA-Seq PLK1-U2AF1 PLK1 chr16 23695410 + U2AF1 chr21 44515853 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Inter-chr p12.2 Other:PLK Tumor suppressor gene q22.3 Oncogene 52453 ChimerSeq STARFusion TCGA_RNA-Seq PNKP-FZR1 PNKP chr19 50369656 - FZR1 chr19 3525866 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Intra-chr q13.33 p13.3 Oncogene Tumor suppressor gene 52454 ChimerSeq STARFusion TCGA_RNA-Seq PON2-LRRFIP1 PON2 chr7 95045554 - LRRFIP1 chr2 238617187 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Inter-chr q21.3 q37.3 52455 ChimerSeq STARFusion TCGA_RNA-Seq PPCDC-C15orf39 PPCDC chr15 75341062 + C15orf39 chr15 75498340 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 CDS-5'UTR Intra-chr q24.2 q24.2 52456 ChimerSeq STARFusion TCGA_RNA-Seq PRPS2-RALGAPB PRPS2 chrX 12817509 + RALGAPB chr20 37198531 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Inter-chr p22.2 q11.23 52457 ChimerSeq STARFusion TCGA_RNA-Seq RAD23B-TMEM38B RAD23B chr9 110045976 + TMEM38B chr9 108510354 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Intra-chr q31.2 Tumor suppressor gene q31.2 52458 ChimerSeq STARFusion TCGA_RNA-Seq RBM17-THADA RBM17 chr10 6143350 + THADA chr2 43625278 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Inter-chr p15.1 p21 52459 ChimerSeq STARFusion TCGA_RNA-Seq RBM19-CCDC53 RBM19 chr12 114403997 - CCDC53 chr12 102439897 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Intra-chr q24.21 52460 ChimerSeq STARFusion TCGA_RNA-Seq RFX3-DYNLRB1 RFX3 chr9 3525747 - DYNLRB1 chr20 33114073 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 5'UTR-CDS Inter-chr p24.2 Transcription factor q11.22 52461 ChimerSeq STARFusion TCGA_RNA-Seq RGS12-NDC1 RGS12 chr4 3344780 + NDC1 chr1 54275419 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Inter-chr p16.3 p32.3 52462 ChimerSeq STARFusion TCGA_RNA-Seq RMI1-PECR RMI1 chr9 86595806 + PECR chr2 216931241 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 5'UTR-CDS Inter-chr q21.32 q35 52463 ChimerSeq STARFusion TCGA_RNA-Seq RPL28-SOD1 RPL28 chr19 55899416 + SOD1 chr21 33036103 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Inter-chr q13.42 q22.11 52464 ChimerSeq STARFusion TCGA_RNA-Seq SBF1-B3GNT3 SBF1 chr22 50913215 - B3GNT3 chr19 17918567 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 CDS-5'UTR Inter-chr q13.33 p13.11 52465 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-EPS8L1 SBNO2 chr19 1147308 - EPS8L1 chr19 55597429 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Intra-chr p13.3 q13.42 52466 ChimerSeq STARFusion TCGA_RNA-Seq SCNM1-HSPD1 SCNM1 chr1 151139890 + HSPD1 chr2 198353971 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Inter-chr q21.3 q33.1 Tumor suppressor gene 52467 ChimerSeq STARFusion TCGA_RNA-Seq SDHA-VDAC3 SDHA chr5 233760 + VDAC3 chr8 42259306 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Inter-chr p15.33 Oncogene Tumor suppressor gene p11.21 52468 ChimerSeq STARFusion TCGA_RNA-Seq SENP7-IMPG2 SENP7 chr3 101066716 - IMPG2 chr3 100951835 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Intra-chr q12.3 q12.3 52469 ChimerSeq STARFusion TCGA_RNA-Seq SGK2-PTPRH SGK2 chr20 42187799 + PTPRH chr19 55693519 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 5'UTR-CDS Inter-chr q13.12 AGC:SGK q13.42 52470 ChimerSeq STARFusion TCGA_RNA-Seq SH2B1-ALDH16A1 SH2B1 chr16 28858148 + ALDH16A1 chr19 49961743 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 5'UTR-CDS Inter-chr p11.2 q13.33 52471 ChimerSeq STARFusion TCGA_RNA-Seq SIRT1-WWP2 SIRT1 chr10 69651312 + WWP2 chr16 69967873 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q22.1 52472 ChimerSeq STARFusion TCGA_RNA-Seq SLC22A23-FOXP4 SLC22A23 chr6 3456140 - FOXP4 chr6 41545724 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Intra-chr p25.2 p21.1 Oncogene Transcription factor 52473 ChimerSeq STARFusion TCGA_RNA-Seq SLC2A11-RAB36 SLC2A11 chr22 24204389 + RAB36 chr22 23494648 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Intra-chr q11.23 q11.23 52474 ChimerSeq STARFusion TCGA_RNA-Seq SPA17-GUCA2A SPA17 chr11 124561678 + GUCA2A chr1 42629281 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Inter-chr q24.2 p34.2 52475 ChimerSeq STARFusion TCGA_RNA-Seq SSR3-OGFOD2 SSR3 chr3 156262097 - OGFOD2 chr12 123462872 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Inter-chr q25.31 q24.31 52476 ChimerSeq STARFusion TCGA_RNA-Seq STT3B-DYNC1LI1 STT3B chr3 31661322 + DYNC1LI1 chr3 32587457 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Intra-chr p23 p22.3 52477 ChimerSeq STARFusion TCGA_RNA-Seq TAMM41-ATG7 TAMM41 chr3 11849307 - ATG7 chr3 11468278 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Intra-chr p25.2 p25.3 Seq+ 52478 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D17-TSSC1 TBC1D17 chr19 50381829 + TSSC1 chr2 3200788 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Inter-chr q13.33 p25.3 52479 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D22A-CERK TBC1D22A chr22 47158745 + CERK chr22 47083103 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Intra-chr q13.31 q13.31 52480 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF2-C1orf186 TM9SF2 chr13 100207901 + C1orf186 chr1 206280026 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 CDS-5'UTR Inter-chr q32.3 q32.1 52481 ChimerSeq STARFusion TCGA_RNA-Seq TMEM181-DYNLT1 TMEM181 chr6 159010814 + DYNLT1 chr6 159062392 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Intra-chr q25.3 q25.3 52482 ChimerSeq STARFusion TCGA_RNA-Seq TPCN1-SLC8B1 TPCN1 chr12 113731154 + SLC8B1 chr12 113737779 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Intra-chr q24.13 q24.13 52483 ChimerSeq STARFusion TCGA_RNA-Seq TSC22D2-CTNNBL1 TSC22D2 chr3 150129095 + CTNNBL1 chr20 36431269 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Inter-chr q25.1 q11.23 52484 ChimerSeq STARFusion TCGA_RNA-Seq TTC39B-ZBTB8OS TTC39B chr9 15267912 - ZBTB8OS chr1 33099711 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Inter-chr p22.3 p35.1 52485 ChimerSeq STARFusion TCGA_RNA-Seq UBTF-SLC44A4 UBTF chr17 42286720 - SLC44A4 chr6 31831525 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Inter-chr q21.31 52486 ChimerSeq STARFusion TCGA_RNA-Seq UQCC1-DYNLRB1 UQCC1 chr20 33934967 - DYNLRB1 chr20 33114073 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Intra-chr q11.22 q11.22 52487 ChimerSeq STARFusion TCGA_RNA-Seq UQCRC2-SEC31A UQCRC2 chr16 21987564 + SEC31A chr4 83803093 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 CDS-5'UTR Inter-chr q21.22 Seq+ 52488 ChimerSeq STARFusion TCGA_RNA-Seq USP34-XPO1 USP34 chr2 61697785 - XPO1 chr2 61729445 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Intra-chr p15 p15 Oncogene Seq+ 52489 ChimerSeq STARFusion TCGA_RNA-Seq WDR13-ST6GALNAC2 WDR13 chrX 48456425 + ST6GALNAC2 chr17 74574898 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Inter-chr p11.23 q25.1 52490 ChimerSeq STARFusion TCGA_RNA-Seq XPO6-GSG1L XPO6 chr16 28112779 - GSG1L chr16 27974524 - Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 Out-of-frame Intra-chr p12.1 p12.1 52491 ChimerSeq STARFusion TCGA_RNA-Seq ZNF133-MRPS6 ZNF133 chr20 18269248 + MRPS6 chr21 35475134 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 5'UTR-CDS Inter-chr p11.23 Transcription factor q22.11 52492 ChimerSeq STARFusion TCGA_RNA-Seq ZNF398-UBE3C ZNF398 chr7 148864022 + UBE3C chr7 157049608 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 0 In-Frame Intra-chr q36.1 Transcription factor q36.3 52493 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-KRT27 GRB7 chr17 37900916 + KRT27 chr17 38933984 - Exonic hg19 STAD TCGA-D7-8573-01A 306 117 In-Frame Intra-chr q12 q21.2 Seq+ 52494 ChimerSeq STARFusion TCGA_RNA-Seq HMGXB3-SLC26A2 HMGXB3 chr5 149420426 + SLC26A2 chr5 149366285 + Exonic hg19 STAD TCGA-D7-8573-01A 162 25 Out-of-frame Intra-chr q32 q32 52495 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-KRT27 GRB7 chr17 37900916 + KRT27 chr17 38950298 - Exonic hg19 STAD TCGA-D7-8573-01A 104 117 CDS-5'UTR Intra-chr q12 q21.2 Seq+ 52496 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-THRA WIPF2 chr17 38375744 + THRA chr17 38230445 + Exonic hg19 STAD TCGA-D7-8573-01A 42 21 5'UTR-5'UTR Intra-chr q21.2 q21.1 Tumor suppressor gene Transcription factor Seq+ 52497 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-WIPF2 ERBB2 chr17 37873733 + WIPF2 chr17 38412643 + Exonic hg19 STAD TCGA-D7-8573-01A 26 20 CDS-5'UTR Intra-chr q12 Oncogene q21.2 Seq+ 52498 ChimerSeq STARFusion TCGA_RNA-Seq PGAP3-PPP1R1B PGAP3 chr17 37830870 - PPP1R1B chr17 37783559 + Exonic hg19 STAD TCGA-D7-8573-01A 25 24 CDS-5'UTR Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 52499 ChimerSeq STARFusion TCGA_RNA-Seq GRB7-IKZF3 GRB7 chr17 37894386 + IKZF3 chr17 37949186 - Exonic hg19 STAD TCGA-D7-8573-01A 24 6 5'UTR-CDS Intra-chr q12 q21.1 Tumor suppressor gene Transcription factor Seq+ 52500 ChimerSeq STARFusion TCGA_RNA-Seq PGAP3-PPP1R1B PGAP3 chr17 37840850 - PPP1R1B chr17 37783559 + Exonic hg19 STAD TCGA-D7-8573-01A 13 23 CDS-5'UTR Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 52501 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142481912 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-D7-8573-01A 16 0 3'UTR-CDS Inter-chr q13.41 52502 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142460418 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-D7-8573-01A 16 0 In-Frame Inter-chr q13.41 52503 ChimerSeq STARFusion TCGA_RNA-Seq MSL1-KRT24 MSL1 chr17 38279633 + KRT24 chr17 38858185 - Exonic hg19 STAD TCGA-D7-8573-01A 14 6 5'UTR-CDS Intra-chr q21.1 q21.2 Seq+ 52504 ChimerSeq STARFusion TCGA_RNA-Seq PGAP3-KRT222 PGAP3 chr17 37840850 - KRT222 chr17 38818296 - Exonic hg19 STAD TCGA-D7-8573-01A 14 2 In-Frame Intra-chr q12 Oncogene q21.2 Seq+ 52505 ChimerSeq STARFusion TCGA_RNA-Seq PGAP3-KRT222 PGAP3 chr17 37840850 - KRT222 chr17 38818296 - Exonic hg19 STAD TCGA-D7-8573-01A 14 2 In-Frame Intra-chr q12 Oncogene q21.2 Seq+ 52506 ChimerSeq STARFusion TCGA_RNA-Seq THRA-MED24 THRA chr17 38243106 + MED24 chr17 38209888 - Exonic hg19 STAD TCGA-D7-8573-01A 9 5 CDS-5'UTR Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Seq+ 52507 ChimerSeq STARFusion TCGA_RNA-Seq THRA-MED24 THRA chr17 38243106 + MED24 chr17 38209910 - Exonic hg19 STAD TCGA-D7-8573-01A 8 5 CDS-5'UTR Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Seq+ 52508 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PPP1R1B RARA chr17 38474700 + PPP1R1B chr17 37785423 + Exonic hg19 STAD TCGA-D7-8573-01A 5 8 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor q12 Tumor suppressor gene Seq+ 52509 ChimerSeq STARFusion TCGA_RNA-Seq AHCTF1-ATP2B4 AHCTF1 chr1 247076534 - ATP2B4 chr1 203676137 + Exonic hg19 STAD TCGA-RD-A8MV-01A 27 20 In-Frame Intra-chr q44 Transcription factor q32.1 Seq+ 52510 ChimerSeq STARFusion TCGA_RNA-Seq CBL-SC5D CBL chr11 119103405 + SC5D chr11 121177095 + Exonic hg19 STAD TCGA-RD-A8MV-01A 12 7 Out-of-frame Intra-chr q23.3 Oncogene Tumor suppressor gene q23.3 Seq+ 52511 ChimerSeq STARFusion TCGA_RNA-Seq RBM39-RPF2P1 RBM39 chr20 34297146 - RPF2P1 chr20 34341239 + Exonic hg19 STAD TCGA-RD-A8MV-01A 9 7 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 52512 ChimerSeq STARFusion TCGA_RNA-Seq RBM39-ROMO1 RBM39 chr20 34304145 - ROMO1 chr20 34287155 + Exonic hg19 STAD TCGA-RD-A8MV-01A 4 12 Out-of-frame Intra-chr q11.22 q11.22 52513 ChimerSeq STARFusion TCGA_RNA-Seq RC3H1-CENPL RC3H1 chr1 173941647 - CENPL chr1 173780444 - Exonic hg19 STAD TCGA-RD-A8MV-01A 5 8 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 52514 ChimerSeq STARFusion TCGA_RNA-Seq RC3H1-CENPL RC3H1 chr1 173941647 - CENPL chr1 173793157 - Exonic hg19 STAD TCGA-RD-A8MV-01A 3 8 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 52515 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF2-IL17D TM9SF2 chr13 100206709 + IL17D chr13 21295775 + Exonic hg19 STAD TCGA-D7-8578-01A 16 2 In-Frame Intra-chr q32.3 q12.11 Seq+ 52516 ChimerSeq STARFusion TCGA_RNA-Seq WDR74-ACTN4 WDR74 chr11 62609175 - ACTN4 chr19 39220200 + Exonic hg19 STAD TCGA-D7-8578-01A 13 0 Out-of-frame Inter-chr q12.3 52517 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CUX1 IGH@ chr14 106815720 - CUX1 chr7 101916650 + Exonic hg19 STAD TCGA-D7-6522-01A 28 0 Out-of-frame Inter-chr 32.33 q22.1 Tumor suppressor gene Transcription factor 52518 ChimerSeq STARFusion TCGA_RNA-Seq VIPAS39-IGL@ VIPAS39 chr14 77893695 - IGL@ chr22 23247175 + Exonic hg19 STAD TCGA-D7-6522-01A 15 0 Out-of-frame Inter-chr q24.3 q11.22 52519 ChimerSeq STARFusion TCGA_RNA-Seq VIPAS39-IGLC3 VIPAS39 chr14 77893695 - IGLC3 chr22 23247175 + Exonic hg19 STAD TCGA-D7-6522-01A 15 0 Out-of-frame Inter-chr q24.3 q11.22 52520 ChimerSeq STARFusion TCGA_RNA-Seq VIPAS39-IGLJ3 VIPAS39 chr14 77893695 - IGLJ3 chr22 23247175 + Exonic hg19 STAD TCGA-D7-6522-01A 15 0 Out-of-frame Inter-chr q24.3 q11.22 52521 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106209411 - Exonic hg19 STAD TCGA-D7-6522-01A 11 0 Out-of-frame Inter-chr q21.2 32.33 52522 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076851 + IGHG1 chr14 106209411 - Exonic hg19 STAD TCGA-D7-6522-01A 11 0 Out-of-frame Inter-chr q21.2 q32.33 52523 ChimerSeq STARFusion TCGA_RNA-Seq PGAM4-CYB5R3 PGAM4 chrX 77224766 - CYB5R3 chr22 43015805 - Exonic hg19 STAD TCGA-BR-8078-01A 4 0 Out-of-frame Inter-chr q21.1 q13.2 52524 ChimerSeq STARFusion TCGA_RNA-Seq VPRBP-RPS6 VPRBP chr3 51434155 - RPS6 chr9 19378859 - Exonic hg19 STAD TCGA-BR-8078-01A 4 0 Out-of-frame Inter-chr p22.1 52525 ChimerSeq STARFusion TCGA_RNA-Seq JSRP1-PTMA JSRP1 chr19 2269543 - PTMA chr2 232573285 + Exonic hg19 STAD TCGA-BR-8078-01A 3 1 Out-of-frame Inter-chr p13.3 q37.1 52526 ChimerSeq STARFusion TCGA_RNA-Seq KRT8-IFITM3 KRT8 chr12 53343105 - IFITM3 chr11 320820 - Exonic hg19 STAD TCGA-BR-8078-01A 3 1 Out-of-frame Inter-chr q13.13 p15.5 Oncogene 52527 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD13D-ZXDC ANKRD13D chr11 67059502 + ZXDC chr3 126180725 - Exonic hg19 STAD TCGA-BR-8078-01A 3 0 Out-of-frame Inter-chr q13.2 q21.3 Transcription factor 52528 ChimerSeq STARFusion TCGA_RNA-Seq C1QA-ATP1A1 C1QA chr1 22964220 + ATP1A1 chr1 116940614 + Exonic hg19 STAD TCGA-BR-8078-01A 3 0 Out-of-frame Intra-chr p36.12 p13.1 52529 ChimerSeq STARFusion TCGA_RNA-Seq CCDC66-ISLR CCDC66 chr3 56627098 + ISLR chr15 74467562 + Exonic hg19 STAD TCGA-BR-8078-01A 3 0 Out-of-frame Inter-chr p14.3 q24.1 52530 ChimerSeq STARFusion TCGA_RNA-Seq COL3A1-CTSB COL3A1 chr2 189857646 + CTSB chr8 11708466 - Exonic hg19 STAD TCGA-BR-8078-01A 3 0 Out-of-frame Inter-chr q32.2 p23.1 52531 ChimerSeq STARFusion TCGA_RNA-Seq DDX54-PAPD4 DDX54 chr12 113610314 - PAPD4 chr5 78944928 + Exonic hg19 STAD TCGA-BR-8078-01A 3 0 Out-of-frame Inter-chr q24.13 q14.1 52532 ChimerSeq STARFusion TCGA_RNA-Seq GPI-SLC22A23 GPI chr19 34856272 + SLC22A23 chr6 3270468 - Exonic hg19 STAD TCGA-BR-8078-01A 3 0 Out-of-frame Inter-chr p25.2 52533 ChimerSeq STARFusion TCGA_RNA-Seq HIATL2-ZNF510 HIATL2 chr9 99680925 - ZNF510 chr9 99538527 - Exonic hg19 STAD TCGA-BR-8078-01A 3 0 3'UTR-5'UTR Intra-chr q22.33 Transcription factor 52534 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2C-MYSM1 PRRC2C chr1 171454874 + MYSM1 chr1 59150923 - Exonic hg19 STAD TCGA-BR-8078-01A 3 0 5'UTR-CDS Intra-chr q24.3 p32.1 Transcription factor 52535 ChimerSeq STARFusion TCGA_RNA-Seq SPIDR-NCOA2 SPIDR chr8 48206619 + NCOA2 chr8 71128999 - Exonic hg19 STAD TCGA-BR-8078-01A 3 0 Out-of-frame Intra-chr q11.21 q13.3 Oncogene Transcription factor 52536 ChimerSeq STARFusion TCGA_RNA-Seq XRN2-KIAA1191 XRN2 chr20 21284111 + KIAA1191 chr5 175775359 - Exonic hg19 STAD TCGA-BR-8078-01A 3 0 In-Frame Inter-chr p11.22 q35.2 52537 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC11-ARIH2 ZCCHC11 chr1 52875156 - ARIH2 chr3 48964895 + Exonic hg19 STAD TCGA-BR-8078-01A 3 0 3'UTR-5'UTR Inter-chr p32.3 p21.31 52538 ChimerSeq STARFusion TCGA_RNA-Seq ZNFX1-NUP153 ZNFX1 chr20 47855788 - NUP153 chr6 17626101 - Exonic hg19 STAD TCGA-BR-8078-01A 3 0 Out-of-frame Inter-chr q13.13 p22.3 52539 ChimerSeq STARFusion TCGA_RNA-Seq FAM73A-ZNF239 FAM73A chr1 78245421 + ZNF239 chr10 44063469 - Exonic hg19 STAD TCGA-BR-8078-01A 2 1 CDS-5'UTR Inter-chr q11.21 Transcription factor 52540 ChimerSeq STARFusion TCGA_RNA-Seq AGBL3-TMEM140 AGBL3 chr7 134730325 + TMEM140 chr7 134849170 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 CDS-5'UTR Intra-chr q33 q33 52541 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-TRAPPC9 AGO2 chr8 141559213 - TRAPPC9 chr8 141436740 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 Out-of-frame Intra-chr q24.3 q24.3 52542 ChimerSeq STARFusion TCGA_RNA-Seq ALAS1-SRPK2 ALAS1 chr3 52238028 + SRPK2 chr7 104758469 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Inter-chr p21.2 q22.3 CMGC:SRPK 52543 ChimerSeq STARFusion TCGA_RNA-Seq ANXA4-SEC23A ANXA4 chr2 70033564 + SEC23A chr14 39514528 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-CDS Inter-chr p13.3 q21.1 52544 ChimerSeq STARFusion TCGA_RNA-Seq ATG2B-SAMD13 ATG2B chr14 96807859 - SAMD13 chr1 84815314 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Inter-chr q32.2 p31.1 52545 ChimerSeq STARFusion TCGA_RNA-Seq ATP13A3-GNB1 ATP13A3 chr3 194206523 - GNB1 chr1 1770677 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-5'UTR Inter-chr q29 p36.33 52546 ChimerSeq STARFusion TCGA_RNA-Seq BRWD1-EZR BRWD1 chr21 40622722 - EZR chr6 159192439 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Inter-chr q22.2 q25.3 52547 ChimerSeq STARFusion TCGA_RNA-Seq C17orf62-EEF1D C17orf62 chr17 80408576 - EEF1D chr8 144669019 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-5'UTR Inter-chr q25.3 52548 ChimerSeq STARFusion TCGA_RNA-Seq C22orf34-MSL2 C22orf34 chr22 50051053 - MSL2 chr3 135871580 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 3'UTR-CDS Inter-chr q13.33 q22.3 52549 ChimerSeq STARFusion TCGA_RNA-Seq CABIN1-MAFF CABIN1 chr22 24434909 + MAFF chr22 38609830 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 CDS-5'UTR Intra-chr q13.1 Transcription factor 52550 ChimerSeq STARFusion TCGA_RNA-Seq CDK14-MAP3K2 CDK14 chr7 90233563 + MAP3K2 chr2 128100770 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 Out-of-frame Inter-chr q21.13 q14.3 STE:STE11 52551 ChimerSeq STARFusion TCGA_RNA-Seq CHIC2-PARN CHIC2 chr4 54915122 - PARN chr16 14530629 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 Out-of-frame Inter-chr q12 52552 ChimerSeq STARFusion TCGA_RNA-Seq CMTR1-ATG4B CMTR1 chr6 37429421 + ATG4B chr2 242594686 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 Out-of-frame Inter-chr p21.2 q37.3 52553 ChimerSeq STARFusion TCGA_RNA-Seq CRK-MATR3 CRK chr17 1359171 - MATR3 chr5 138642928 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 CDS-5'UTR Inter-chr p13.3 q31.2 52554 ChimerSeq STARFusion TCGA_RNA-Seq CUL3-AP1S3 CUL3 chr2 225400245 - AP1S3 chr2 224642586 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Intra-chr q36.2 q36.1 52555 ChimerSeq STARFusion TCGA_RNA-Seq CWF19L1-NRD1 CWF19L1 chr10 102027328 - NRD1 chr1 52306186 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Inter-chr q24.31 52556 ChimerSeq STARFusion TCGA_RNA-Seq DAB2-SLC1A3 DAB2 chr5 39462180 - SLC1A3 chr5 36629552 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-CDS Intra-chr p13.1 Tumor suppressor gene p13.2 52557 ChimerSeq STARFusion TCGA_RNA-Seq DAG1-RBM6 DAG1 chr3 49507866 + RBM6 chr3 50009492 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-CDS Intra-chr p21.31 p21.31 Tumor suppressor gene 52558 ChimerSeq STARFusion TCGA_RNA-Seq DANCR-ADK DANCR chr4 53579126 + ADK chr10 76360137 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-CDS Inter-chr q12 q22.2 52559 ChimerSeq STARFusion TCGA_RNA-Seq DANCR-MICAL1 DANCR chr4 53579126 + MICAL1 chr6 109767975 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-CDS Inter-chr q12 q21 Seq+ 52560 ChimerSeq STARFusion TCGA_RNA-Seq DCTN4-PPARGC1B DCTN4 chr5 150133041 - PPARGC1B chr5 149199996 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 Out-of-frame Intra-chr q33.1 q32 52561 ChimerSeq STARFusion TCGA_RNA-Seq DENND1A-PSMB7 DENND1A chr9 126692168 - PSMB7 chr9 127119194 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 Out-of-frame Intra-chr q33.3 q33.3 Seq+ 52562 ChimerSeq STARFusion TCGA_RNA-Seq DIAPH1-YEATS2 DIAPH1 chr5 140998365 - YEATS2 chr3 183465460 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Inter-chr q31.3 q27.1 52563 ChimerSeq STARFusion TCGA_RNA-Seq DNM1L-UBE2N DNM1L chr12 32832399 + UBE2N chr12 93805075 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Intra-chr p11.21 q22 52564 ChimerSeq STARFusion TCGA_RNA-Seq ECI2-HNRNPAB ECI2 chr6 4133783 - HNRNPAB chr5 177633733 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Inter-chr p25.2 q35.3 52565 ChimerSeq STARFusion TCGA_RNA-Seq EIF3A-UBR3 EIF3A chr10 120840140 - UBR3 chr2 170871791 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 Out-of-frame Inter-chr q26.11 q31.1 52566 ChimerSeq STARFusion TCGA_RNA-Seq FAM151B-ZFYVE16 FAM151B chr5 79783967 + ZFYVE16 chr5 79768580 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Intra-chr q14.1 q14.1 52567 ChimerSeq STARFusion TCGA_RNA-Seq FAM19A5-GRSF1 FAM19A5 chr22 49042558 + GRSF1 chr4 71702031 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 Out-of-frame Inter-chr q13.32 q13.3 52568 ChimerSeq STARFusion TCGA_RNA-Seq FAM208B-CDC123 FAM208B chr10 5727138 + CDC123 chr10 12251966 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-CDS Intra-chr p15.1 p14 52569 ChimerSeq STARFusion TCGA_RNA-Seq FBXW11-SPIDR FBXW11 chr5 171337576 - SPIDR chr8 48352885 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 Out-of-frame Inter-chr q35.1 q11.21 52570 ChimerSeq STARFusion TCGA_RNA-Seq FERMT1-CHPF2 FERMT1 chr20 6103421 - CHPF2 chr7 150929585 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-5'UTR Inter-chr p12.3 q36.1 Seq+ 52571 ChimerSeq STARFusion TCGA_RNA-Seq FGD5-LSM3 FGD5 chr3 14942568 + LSM3 chr3 14239536 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Intra-chr p25.1 p25.1 52572 ChimerSeq STARFusion TCGA_RNA-Seq FLNB-ULK3 FLNB chr3 58154385 + ULK3 chr15 75131391 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Inter-chr p14.3 q24.1 Other:ULK 52573 ChimerSeq STARFusion TCGA_RNA-Seq FN1-IAH1 FN1 chr2 216295438 - IAH1 chr2 9624561 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Intra-chr q35 Oncogene p25.1 52574 ChimerSeq STARFusion TCGA_RNA-Seq G6PD-SEPT9 G6PD chrX 153775004 - SEPT9 chr17 75483506 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Inter-chr q28 Oncogene Seq+ 52575 ChimerSeq STARFusion TCGA_RNA-Seq GALNT10-PRDM2 GALNT10 chr5 153570585 + PRDM2 chr1 14099573 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 Out-of-frame Inter-chr q33.2 p36.21 Tumor suppressor gene Transcription factor Seq+ 52576 ChimerSeq STARFusion TCGA_RNA-Seq GLUD1P3-JMJD1C GLUD1P3 chr10 75490631 + JMJD1C chr10 65024524 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 Out-of-frame Intra-chr q22.2 q21.3 52577 ChimerSeq STARFusion TCGA_RNA-Seq GMDS-CNIH4 GMDS chr6 2124921 - CNIH4 chr1 224553581 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Inter-chr p25.3 q42.11 Seq+ 52578 ChimerSeq STARFusion TCGA_RNA-Seq GNB2-SNHG12 GNB2 chr7 100274422 + SNHG12 chr1 28906493 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 CDS-3'UTR Inter-chr q22.1 p35.3 Seq+ 52579 ChimerSeq STARFusion TCGA_RNA-Seq GNPTG-RXRA GNPTG chr16 1402307 + RXRA chr9 137293478 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Inter-chr p13.3 q34.2 Transcription factor 52580 ChimerSeq STARFusion TCGA_RNA-Seq GTF2E2-STAU2 GTF2E2 chr8 30469816 - STAU2 chr8 74516098 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Intra-chr p12 q21.11 52581 ChimerSeq STARFusion TCGA_RNA-Seq GTSE1-SMARCC1 GTSE1 chr22 46693376 + SMARCC1 chr3 47719801 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 Out-of-frame Inter-chr q13.31 p21.31 Tumor suppressor gene 52582 ChimerSeq STARFusion TCGA_RNA-Seq HIVEP3-CEP350 HIVEP3 chr1 42384084 - CEP350 chr1 180010273 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-CDS Intra-chr p34.2 Tumor suppressor gene Transcription factor q25.2 52583 ChimerSeq STARFusion TCGA_RNA-Seq HSD17B11-NUDT9 HSD17B11 chr4 88312013 - NUDT9 chr4 88362981 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 52584 ChimerSeq STARFusion TCGA_RNA-Seq HSD17B7P2-UIMC1 HSD17B7P2 chr10 38647443 + UIMC1 chr5 176385155 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-CDS Inter-chr p11.1 q35.2 Tumor suppressor gene 52585 ChimerSeq STARFusion TCGA_RNA-Seq IPO11-DIAPH1 IPO11 chr5 61708756 + DIAPH1 chr5 140967817 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-CDS Intra-chr q12.1 q31.3 52586 ChimerSeq STARFusion TCGA_RNA-Seq IRF2-PSMB1 IRF2 chr4 185395533 - PSMB1 chr6 170858201 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-CDS Inter-chr q35.1 Transcription factor 52587 ChimerSeq STARFusion TCGA_RNA-Seq JMJD1C-TTC8 JMJD1C chr10 65140078 - TTC8 chr14 89305796 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Inter-chr q21.3 q31.3 52588 ChimerSeq STARFusion TCGA_RNA-Seq KDM1A-MORC2 KDM1A chr1 23346440 + MORC2 chr22 31354680 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 CDS-5'UTR Inter-chr p36.12 q12.2 52589 ChimerSeq STARFusion TCGA_RNA-Seq LARP4-ATF1 LARP4 chr12 50794811 + ATF1 chr12 51173923 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-5'UTR Intra-chr q13.12 q13.12 Oncogene Transcription factor 52590 ChimerSeq STARFusion TCGA_RNA-Seq LGALS3-EEF1D LGALS3 chr14 55596018 + EEF1D chr8 144669022 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-5'UTR Inter-chr q22.3 52591 ChimerSeq STARFusion TCGA_RNA-Seq LRBA-SMAD1 LRBA chr4 151199005 - SMAD1 chr4 146435590 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 CDS-5'UTR Intra-chr q31.3 q31.21 Transcription factor 52592 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-CCT2 LYZ chr12 69746078 + CCT2 chr12 69983265 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Intra-chr q15 q15 Seq+ 52593 ChimerSeq STARFusion TCGA_RNA-Seq MAN2A1-SSU72 MAN2A1 chr5 109065214 + SSU72 chr1 1500296 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Inter-chr q21.3 p36.33 52594 ChimerSeq STARFusion TCGA_RNA-Seq MBP-SCAF11 MBP chr18 74817167 - SCAF11 chr12 46357971 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 CDS-5'UTR Inter-chr q23 q12 52595 ChimerSeq STARFusion TCGA_RNA-Seq MED31-GLCCI1 MED31 chr17 6553676 - GLCCI1 chr7 8043538 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Inter-chr p13.1 p21.3 52596 ChimerSeq STARFusion TCGA_RNA-Seq MFF-PAXIP1 MFF chr2 228190143 + PAXIP1 chr7 154749004 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-CDS Inter-chr q36.3 q36.2 52597 ChimerSeq STARFusion TCGA_RNA-Seq MGAT5-NR6A1 MGAT5 chr2 134877862 + NR6A1 chr9 127495628 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-CDS Inter-chr q21.2 q33.3 Transcription factor 52598 ChimerSeq STARFusion TCGA_RNA-Seq MGST1-PKP4 MGST1 chr12 16507204 + PKP4 chr2 159433783 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Inter-chr p12.3 q24.1 52599 ChimerSeq STARFusion TCGA_RNA-Seq MICU2-ITM2B MICU2 chr13 22178078 - ITM2B chr13 48827944 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 Out-of-frame Intra-chr q12.11 q14.2 52600 ChimerSeq STARFusion TCGA_RNA-Seq MPV17-NACC1 MPV17 chr2 27545315 - NACC1 chr19 13246014 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 CDS-5'UTR Inter-chr p23.3 p13.13 52601 ChimerSeq STARFusion TCGA_RNA-Seq MTERFD1-DOCK5 MTERFD1 chr8 97273729 - DOCK5 chr8 25156460 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-CDS Intra-chr p21.2 52602 ChimerSeq STARFusion TCGA_RNA-Seq MTF2-DDAH1 MTF2 chr1 93545088 + DDAH1 chr1 85790566 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 Out-of-frame Intra-chr p22.1 Transcription factor p22.3 Seq+ 52603 ChimerSeq STARFusion TCGA_RNA-Seq MYL12A-RAI14 MYL12A chr18 3247907 + RAI14 chr5 34796044 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-CDS Inter-chr p11.31 p13.2 52604 ChimerSeq STARFusion TCGA_RNA-Seq NAALADL2-ATP6V0E1 NAALADL2 chr3 175042114 + ATP6V0E1 chr5 172461402 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 CDS-3'UTR Inter-chr q26.31 q35.1 52605 ChimerSeq STARFusion TCGA_RNA-Seq NCOA3-ETS1 NCOA3 chr20 46212005 + ETS1 chr11 128360471 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-CDS Inter-chr q13.12 Transcription factor q24.3 Oncogene Transcription factor 52606 ChimerSeq STARFusion TCGA_RNA-Seq NDUFA12-MRPL11 NDUFA12 chr12 95396582 - MRPL11 chr11 66205730 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 Out-of-frame Inter-chr q22 q13.2 52607 ChimerSeq STARFusion TCGA_RNA-Seq NHLRC3-PAK1 NHLRC3 chr13 39613848 + PAK1 chr11 77091039 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Inter-chr q13.3 q14.1 STE:STE20 52608 ChimerSeq STARFusion TCGA_RNA-Seq NIN-CASP10 NIN chr14 51239019 - CASP10 chr2 202072798 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Inter-chr q22.1 Oncogene q33.1 52609 ChimerSeq STARFusion TCGA_RNA-Seq NRIP1-FAT1 NRIP1 chr21 16437066 - FAT1 chr4 187510374 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-CDS Inter-chr q21.1 q35.2 Tumor suppressor gene 52610 ChimerSeq STARFusion TCGA_RNA-Seq PIBF1-KLF5 PIBF1 chr13 73372164 + KLF5 chr13 73635999 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Intra-chr q21.33 q22.1 Tumor suppressor gene Transcription factor 52611 ChimerSeq STARFusion TCGA_RNA-Seq PPP4C-XPO1 PPP4C chr16 30087796 + XPO1 chr2 61761038 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 CDS-5'UTR Inter-chr p11.2 p15 Oncogene 52612 ChimerSeq STARFusion TCGA_RNA-Seq PRKAG1-TUBA1B PRKAG1 chr12 49412515 - TUBA1B chr12 49523505 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Intra-chr q13.12 q13.12 52613 ChimerSeq STARFusion TCGA_RNA-Seq PRKAR1B-MAD1L1 PRKAR1B chr7 645830 - MAD1L1 chr7 2020176 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene 52614 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2C-ATP1B1 PRRC2C chr1 171454874 + ATP1B1 chr1 169094122 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-CDS Intra-chr q24.3 q24.2 52615 ChimerSeq STARFusion TCGA_RNA-Seq PSMD14-MBNL1 PSMD14 chr2 162175384 + MBNL1 chr3 152163071 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Inter-chr q24.2 q25.1 52616 ChimerSeq STARFusion TCGA_RNA-Seq RAB20-ING1 RAB20 chr13 111213695 - ING1 chr13 111371576 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Intra-chr q34 q34 Tumor suppressor gene 52617 ChimerSeq STARFusion TCGA_RNA-Seq RAB3IP-CNOT2 RAB3IP chr12 70150443 + CNOT2 chr12 70671912 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 CDS-5'UTR Intra-chr q15 q15 Seq+ 52618 ChimerSeq STARFusion TCGA_RNA-Seq RABGAP1L-PGM1 RABGAP1L chr1 174128795 + PGM1 chr1 64095096 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-5'UTR Intra-chr q25.1 p31.3 52619 ChimerSeq STARFusion TCGA_RNA-Seq RAD51AP1-FNBP4 RAD51AP1 chr12 4653070 + FNBP4 chr11 47746330 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 Out-of-frame Inter-chr p13.32 p11.2 52620 ChimerSeq STARFusion TCGA_RNA-Seq RCBTB1-HEATR5B RCBTB1 chr13 50154641 - HEATR5B chr2 37289193 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-CDS Inter-chr q14.2 p22.2 52621 ChimerSeq STARFusion TCGA_RNA-Seq RCC2-SNAPC4 RCC2 chr1 17742976 - SNAPC4 chr9 139270933 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Inter-chr q34.3 Transcription factor 52622 ChimerSeq STARFusion TCGA_RNA-Seq RGL1-RPAP2 RGL1 chr1 183835207 + RPAP2 chr1 92798948 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 Out-of-frame Intra-chr q25.3 p22.1 52623 ChimerSeq STARFusion TCGA_RNA-Seq RHOA-SFPQ RHOA chr3 49449253 - SFPQ chr1 35643637 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-3'UTR Inter-chr p21.31 Oncogene Tumor suppressor gene p34.3 52624 ChimerSeq STARFusion TCGA_RNA-Seq RPL27A-ADAM28 RPL27A chr11 8706439 + ADAM28 chr8 24211897 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Inter-chr p15.4 p21.2 52625 ChimerSeq STARFusion TCGA_RNA-Seq RPS19-HNRNPUL1 RPS19 chr19 42365281 + HNRNPUL1 chr19 41774128 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Intra-chr q13.2 q13.2 52626 ChimerSeq STARFusion TCGA_RNA-Seq SDHC-ZNRF2P2 SDHC chr1 161298287 + ZNRF2P2 chr7 29690955 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 CDS-3'UTR Inter-chr q23.3 Oncogene p14.3 52627 ChimerSeq STARFusion TCGA_RNA-Seq SET-UTP11L SET chr9 131453506 + UTP11L chr1 38483340 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Inter-chr q34.11 52628 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A12-DYNC1I2 SLC25A12 chr2 172749715 - DYNC1I2 chr2 172600559 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Intra-chr q31.1 q31.1 52629 ChimerSeq STARFusion TCGA_RNA-Seq SLC44A2-SAR1A SLC44A2 chr19 10713237 + SAR1A chr10 71921687 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 CDS-5'UTR Inter-chr p13.2 q22.1 52630 ChimerSeq STARFusion TCGA_RNA-Seq SMURF1-CRLS1 SMURF1 chr7 98741349 - CRLS1 chr20 6011931 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Inter-chr p12.3 52631 ChimerSeq STARFusion TCGA_RNA-Seq SNHG8-MAP2K2 SNHG8 chr4 119200292 + MAP2K2 chr19 4090706 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-CDS Inter-chr q26 p13.3 STE:STE7 Oncogene 52632 ChimerSeq STARFusion TCGA_RNA-Seq SNRPF-NT5DC3 SNRPF chr12 96255071 + NT5DC3 chr12 104190809 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Intra-chr q23.1 q23.3 52633 ChimerSeq STARFusion TCGA_RNA-Seq SRSF5-CPSF2 SRSF5 chr14 70233972 + CPSF2 chr14 92597295 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-5'UTR Intra-chr q24.1 q32.12 52634 ChimerSeq STARFusion TCGA_RNA-Seq SSBP4-PPP1R12C SSBP4 chr19 18530517 + PPP1R12C chr19 55607546 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Intra-chr p13.11 q13.42 52635 ChimerSeq STARFusion TCGA_RNA-Seq SSX2IP-SNX7 SSX2IP chr1 85156054 - SNX7 chr1 99225610 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-5'UTR Intra-chr p22.3 p21.3 52636 ChimerSeq STARFusion TCGA_RNA-Seq STAU2-VPS29 STAU2 chr8 74659018 - VPS29 chr12 110931036 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-CDS Inter-chr q21.11 q24.11 52637 ChimerSeq STARFusion TCGA_RNA-Seq TAX1BP1-ZNF207 TAX1BP1 chr7 27834065 + ZNF207 chr17 30696314 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 Out-of-frame Inter-chr p15.2 q11.2 Transcription factor 52638 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D5-FOXN3 TBC1D5 chr3 17549966 - FOXN3 chr14 89817152 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 Out-of-frame Inter-chr p24.3 q32.11 Transcription factor Seq+ 52639 ChimerSeq STARFusion TCGA_RNA-Seq TRMT11-TGFBR2 TRMT11 chr6 126307768 + TGFBR2 chr3 30713130 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 Out-of-frame Inter-chr q22.32 p24.1 Oncogene Tumor suppressor gene 52640 ChimerSeq STARFusion TCGA_RNA-Seq TTC12-CASP10 TTC12 chr11 113205759 + CASP10 chr2 202093656 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 Out-of-frame Inter-chr q23.2 q33.1 52641 ChimerSeq STARFusion TCGA_RNA-Seq TYK2-PRKCSH TYK2 chr19 10488890 - PRKCSH chr19 11561461 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 CDS-3'UTR Intra-chr p13.2 TK:JakA p13.2 52642 ChimerSeq STARFusion TCGA_RNA-Seq UQCC1-TRPC4AP UQCC1 chr20 33999743 - TRPC4AP chr20 33645374 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 Out-of-frame Intra-chr q11.22 q11.22 52643 ChimerSeq STARFusion TCGA_RNA-Seq URB2-PTK2 URB2 chr1 229762103 + PTK2 chr8 141829119 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-CDS Inter-chr q42.13 q24.3 52644 ChimerSeq STARFusion TCGA_RNA-Seq USP12-CDK8 USP12 chr13 27745729 - CDK8 chr13 26911704 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 Out-of-frame Intra-chr q12.13 Tumor suppressor gene q12.13 CMGC:CDK Oncogene 52645 ChimerSeq STARFusion TCGA_RNA-Seq UVSSA-ZNF605 UVSSA chr4 1341977 + ZNF605 chr12 133524856 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 CDS-5'UTR Inter-chr p16.3 q24.33 Transcription factor 52646 ChimerSeq STARFusion TCGA_RNA-Seq VPS13A-CEP78 VPS13A chr9 79875140 + CEP78 chr9 80861585 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 Out-of-frame Intra-chr q21.2 q21.2 52647 ChimerSeq STARFusion TCGA_RNA-Seq WDR33-FAM57A WDR33 chr2 128525763 - FAM57A chr17 643745 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 In-Frame Inter-chr q14.3 p13.3 52648 ChimerSeq STARFusion TCGA_RNA-Seq WWP1-EIF4G2 WWP1 chr8 87355159 + EIF4G2 chr11 10823321 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-CDS Inter-chr q21.3 p15.4 52649 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H13-MRPS31 ZC3H13 chr13 46626833 - MRPS31 chr13 41303737 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-CDS Intra-chr q14.13 q14.11 Seq+ 52650 ChimerSeq STARFusion TCGA_RNA-Seq ZNF544-CPSF7 ZNF544 chr19 58741828 + CPSF7 chr11 61179409 - Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-CDS Inter-chr q13.43 Transcription factor q12.2 52651 ChimerSeq STARFusion TCGA_RNA-Seq ZNF577-RPS11 ZNF577 chr19 52390074 - RPS11 chr19 50001174 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 5'UTR-5'UTR Intra-chr q13.41 Transcription factor q13.33 52652 ChimerSeq STARFusion TCGA_RNA-Seq ZNF718-SPTBN1 ZNF718 chr4 127011 + SPTBN1 chr2 54891590 + Exonic hg19 STAD TCGA-BR-8078-01A 2 0 Out-of-frame Inter-chr p16.3 Transcription factor p16.2 Tumor suppressor gene 52653 ChimerSeq STARFusion TCGA_RNA-Seq REG1A-DDX52 REG1A chr2 79350526 + DDX52 chr17 35985986 - Exonic hg19 STAD TCGA-VQ-A91A-01A 58 0 Out-of-frame Inter-chr p12 q12 52654 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHG1-MTHFD1L PLEKHG1 chr6 150971922 + MTHFD1L chr6 151355629 + Exonic hg19 STAD TCGA-VQ-A91A-01A 33 4 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 52655 ChimerSeq STARFusion TCGA_RNA-Seq USP28-CLYBL USP28 chr11 113723223 - CLYBL chr13 100425078 + Exonic hg19 STAD TCGA-BR-7722-01A 5 0 Out-of-frame Inter-chr q23.2 q32.3 52656 ChimerSeq STARFusion TCGA_RNA-Seq PCGF2-PSMB3 PCGF2 chr17 36904449 - PSMB3 chr17 36912136 + Exonic hg19 STAD TCGA-BR-7722-01A 3 1 5'UTR-CDS Intra-chr Tumor suppressor gene Transcription factor 52657 ChimerSeq STARFusion TCGA_RNA-Seq MORF4L1-TPSD1 MORF4L1 chr15 79165428 + TPSD1 chr16 1308374 + Exonic hg19 STAD TCGA-BR-7722-01A 3 0 Out-of-frame Inter-chr q25.1 p13.3 52658 ChimerSeq STARFusion TCGA_RNA-Seq MRPS26-TAGLN MRPS26 chr20 3027085 + TAGLN chr11 117075170 + Exonic hg19 STAD TCGA-BR-7722-01A 3 0 Out-of-frame Inter-chr p13 q23.3 Tumor suppressor gene 52659 ChimerSeq STARFusion TCGA_RNA-Seq PRKCD-BCL3 PRKCD chr3 53226267 + BCL3 chr19 45262064 + Exonic hg19 STAD TCGA-BR-7722-01A 3 0 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q13.32 Oncogene 52660 ChimerSeq STARFusion TCGA_RNA-Seq ANKS1A-ITPR3 ANKS1A chr6 34857376 + ITPR3 chr6 33608261 + Exonic hg19 STAD TCGA-BR-7722-01A 2 0 In-Frame Intra-chr p21.31 p21.31 52661 ChimerSeq STARFusion TCGA_RNA-Seq AP1G1-MTMR1 AP1G1 chr16 71842666 - MTMR1 chrX 149895687 + Exonic hg19 STAD TCGA-BR-7722-01A 2 0 5'UTR-CDS Inter-chr q22.2 q28 52662 ChimerSeq STARFusion TCGA_RNA-Seq ARID1B-ARHGAP15 ARID1B chr6 157454341 + ARHGAP15 chr2 144381702 + Exonic hg19 STAD TCGA-BR-7722-01A 2 0 In-Frame Inter-chr q25.3 Oncogene q22.2 52663 ChimerSeq STARFusion TCGA_RNA-Seq ATP9A-RAB22A ATP9A chr20 50305603 - RAB22A chr20 56918774 + Exonic hg19 STAD TCGA-BR-7722-01A 2 0 Out-of-frame Intra-chr q13.2 q13.32 52664 ChimerSeq STARFusion TCGA_RNA-Seq BLM-SEPW1 BLM chr15 91308644 + SEPW1 chr19 48283982 + Exonic hg19 STAD TCGA-BR-7722-01A 2 0 Out-of-frame Inter-chr q26.1 Oncogene Tumor suppressor gene 52665 ChimerSeq STARFusion TCGA_RNA-Seq CAB39-ENTPD6 CAB39 chr2 231624830 + ENTPD6 chr20 25187158 + Exonic hg19 STAD TCGA-BR-7722-01A 2 0 CDS-3'UTR Inter-chr q37.1 p11.21 52666 ChimerSeq STARFusion TCGA_RNA-Seq CAST-NDUFS4 CAST chr5 96038619 + NDUFS4 chr5 52978948 + Exonic hg19 STAD TCGA-BR-7722-01A 2 0 5'UTR-CDS Intra-chr q15 q11.2 52667 ChimerSeq STARFusion TCGA_RNA-Seq CCNJ-SULT1C2 CCNJ chr10 97804219 + SULT1C2 chr2 108921030 + Exonic hg19 STAD TCGA-BR-7722-01A 2 0 In-Frame Inter-chr q24.1 q12.3 52668 ChimerSeq STARFusion TCGA_RNA-Seq CHTOP-ICA1 CHTOP chr1 153606819 + ICA1 chr7 8196844 - Exonic hg19 STAD TCGA-BR-7722-01A 2 0 5'UTR-CDS Inter-chr q21.3 p21.3 52669 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-LRIG3 CPSF6 chr12 69633486 + LRIG3 chr12 59284578 - Exonic hg19 STAD TCGA-BR-7722-01A 2 0 Out-of-frame Intra-chr q15 q14.1 Tumor suppressor gene 52670 ChimerSeq STARFusion TCGA_RNA-Seq FAM126A-CCT7 FAM126A chr7 23053544 - CCT7 chr2 73479768 + Exonic hg19 STAD TCGA-BR-7722-01A 2 0 5'UTR-5'UTR Inter-chr p15.3 p13.2 52671 ChimerSeq STARFusion TCGA_RNA-Seq FBXW4-PWP2 FBXW4 chr10 103454138 - PWP2 chr21 45550479 + Exonic hg19 STAD TCGA-BR-7722-01A 2 0 In-Frame Inter-chr q24.32 q22.3 52672 ChimerSeq STARFusion TCGA_RNA-Seq GIGYF2-LRRC28 GIGYF2 chr2 233621044 + LRRC28 chr15 99926235 + Exonic hg19 STAD TCGA-BR-7722-01A 2 0 Out-of-frame Inter-chr q37.1 q26.3 52673 ChimerSeq STARFusion TCGA_RNA-Seq HMGCL-ELF3 HMGCL chr1 24151846 - ELF3 chr1 201981085 + Exonic hg19 STAD TCGA-BR-7722-01A 2 0 Out-of-frame Intra-chr p36.11 q32.1 Transcription factor 52674 ChimerSeq STARFusion TCGA_RNA-Seq IER2-PPP6R2 IER2 chr19 13261366 + PPP6R2 chr22 50873395 + Exonic hg19 STAD TCGA-BR-7722-01A 2 0 5'UTR-CDS Inter-chr p13.13 q13.33 52675 ChimerSeq STARFusion TCGA_RNA-Seq MNT-PQLC1 MNT chr17 2297337 - PQLC1 chr18 77664183 - Exonic hg19 STAD TCGA-BR-7722-01A 2 0 Out-of-frame Inter-chr p13.3 Tumor suppressor gene Transcription factor q23 52676 ChimerSeq STARFusion TCGA_RNA-Seq MYO5B-MBD2 MYO5B chr18 47398537 - MBD2 chr18 51715381 - Exonic hg19 STAD TCGA-BR-7722-01A 2 0 In-Frame Intra-chr q21.1 q21.2 Transcription factor 52677 ChimerSeq STARFusion TCGA_RNA-Seq NLGN3-MED12 NLGN3 chrX 70368056 + MED12 chrX 70348964 + Exonic hg19 STAD TCGA-BR-7722-01A 2 0 In-Frame Intra-chr q13.1 q13.1 Oncogene 52678 ChimerSeq STARFusion TCGA_RNA-Seq NLGN4Y-WASH4P NLGN4Y chrY 16634821 + WASH4P chr16 66738 - Exonic hg19 STAD TCGA-BR-7722-01A 2 0 Out-of-frame Inter-chr q11.221 p13.3 52679 ChimerSeq STARFusion TCGA_RNA-Seq NUP210-DYNC1LI1 NUP210 chr3 13393379 - DYNC1LI1 chr3 32568400 - Exonic hg19 STAD TCGA-BR-7722-01A 2 0 Out-of-frame Intra-chr p25.1 p22.3 52680 ChimerSeq STARFusion TCGA_RNA-Seq PLXNB2-PRMT1 PLXNB2 chr22 50724229 - PRMT1 chr19 50191419 + Exonic hg19 STAD TCGA-BR-7722-01A 2 0 In-Frame Inter-chr q13.33 q13.33 52681 ChimerSeq STARFusion TCGA_RNA-Seq PPFIBP1-FGFR1OP2 PPFIBP1 chr12 27731172 + FGFR1OP2 chr12 27107078 + Exonic hg19 STAD TCGA-BR-7722-01A 2 0 5'UTR-5'UTR Intra-chr p11.23 p11.23 52682 ChimerSeq STARFusion TCGA_RNA-Seq PPM1G-AKAP8L PPM1G chr2 27632170 - AKAP8L chr19 15491423 - Exonic hg19 STAD TCGA-BR-7722-01A 2 0 In-Frame Inter-chr p23.3 p13.12 Transcription factor 52683 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF4-CWC22 RAPGEF4 chr2 173686704 + CWC22 chr2 180810442 - Exonic hg19 STAD TCGA-BR-7722-01A 2 0 Out-of-frame Intra-chr q31.1 q31.3 52684 ChimerSeq STARFusion TCGA_RNA-Seq RAVER1-EIF3CL RAVER1 chr19 10439318 - EIF3CL chr16 28394802 - Exonic hg19 STAD TCGA-BR-7722-01A 2 0 CDS-5'UTR Inter-chr p13.2 p12.1 52685 ChimerSeq STARFusion TCGA_RNA-Seq RHBDD1-CDKAL1 RHBDD1 chr2 227779067 + CDKAL1 chr6 20955650 + Exonic hg19 STAD TCGA-BR-7722-01A 2 0 In-Frame Inter-chr q36.3 p22.3 52686 ChimerSeq STARFusion TCGA_RNA-Seq RPSAP58-UBB RPSAP58 chr19 23945936 + UBB chr17 16285216 + Exonic hg19 STAD TCGA-BR-7722-01A 2 0 5'UTR-5'UTR Inter-chr p12 p11.2 52687 ChimerSeq STARFusion TCGA_RNA-Seq SEC23IP-RGS10 SEC23IP chr10 121652457 + RGS10 chr10 121259771 - Exonic hg19 STAD TCGA-BR-7722-01A 2 0 Out-of-frame Intra-chr q26.11 q26.11 52688 ChimerSeq STARFusion TCGA_RNA-Seq SNHG14-GSN SNHG14 chr15 25227584 + GSN chr9 124094712 + Exonic hg19 STAD TCGA-BR-7722-01A 2 0 Out-of-frame Inter-chr q11.2 q33.2 Tumor suppressor gene 52689 ChimerSeq STARFusion TCGA_RNA-Seq SNURF-GSN SNURF chr15 25227584 + GSN chr9 124094712 + Exonic hg19 STAD TCGA-BR-7722-01A 2 0 3'UTR-CDS Inter-chr q11.2 q33.2 Tumor suppressor gene 52690 ChimerSeq STARFusion TCGA_RNA-Seq SORD-SQRDL SORD chr15 45315547 + SQRDL chr15 45974676 + Exonic hg19 STAD TCGA-BR-7722-01A 2 0 In-Frame Intra-chr q21.1 52691 ChimerSeq STARFusion TCGA_RNA-Seq SS18L1-SQSTM1 SS18L1 chr20 60718945 + SQSTM1 chr5 179263436 + Exonic hg19 STAD TCGA-BR-7722-01A 2 0 Out-of-frame Inter-chr q13.33 q35.3 52692 ChimerSeq STARFusion TCGA_RNA-Seq TIE1-CC2D1A TIE1 chr1 43766800 + CC2D1A chr19 14031370 + Exonic hg19 STAD TCGA-BR-7722-01A 2 0 In-Frame Inter-chr p34.2 TK:Tie p13.12 Transcription factor 52693 ChimerSeq STARFusion TCGA_RNA-Seq UNK-SAP30BP UNK chr17 73781065 + SAP30BP chr17 73689520 + Exonic hg19 STAD TCGA-BR-7722-01A 2 0 Out-of-frame Intra-chr q25.1 q25.1 52694 ChimerSeq STARFusion TCGA_RNA-Seq VMP1-NCOR1 VMP1 chr17 57785109 + NCOR1 chr17 16029523 - Exonic hg19 STAD TCGA-BR-7722-01A 2 0 5'UTR-CDS Intra-chr q23.1 p11.2 Oncogene 52695 ChimerSeq STARFusion TCGA_RNA-Seq WWTR1-NXPE3 WWTR1 chr3 149260122 - NXPE3 chr3 101520079 + Exonic hg19 STAD TCGA-BR-7722-01A 2 0 Out-of-frame Intra-chr q25.1 q12.3 52696 ChimerSeq STARFusion TCGA_RNA-Seq GART-IGH@ GART chr21 34889796 - IGH@ chr14 106111126 - Exonic hg19 STAD TCGA-CD-8529-01A 215 93 Out-of-frame Inter-chr 32.33 52697 ChimerSeq STARFusion TCGA_RNA-Seq GART-IGHG2 GART chr21 34889796 - IGHG2 chr14 106111126 - Exonic hg19 STAD TCGA-CD-8529-01A 215 93 Out-of-frame Inter-chr Seq+ 52698 ChimerSeq STARFusion TCGA_RNA-Seq GART-IGH@ GART chr21 34889796 - IGH@ chr14 106092402 - Exonic hg19 STAD TCGA-CD-8529-01A 171 93 Out-of-frame Inter-chr 32.33 52699 ChimerSeq STARFusion TCGA_RNA-Seq GART-IGH@ GART chr21 34889796 - IGH@ chr14 106237742 - Exonic hg19 STAD TCGA-CD-8529-01A 102 93 Out-of-frame Inter-chr 32.33 52700 ChimerSeq STARFusion TCGA_RNA-Seq GART-IGH@ GART chr21 34889796 - IGH@ chr14 106209407 - Exonic hg19 STAD TCGA-CD-8529-01A 76 93 Out-of-frame Inter-chr 32.33 52701 ChimerSeq STARFusion TCGA_RNA-Seq GART-IGHG2 GART chr21 34889796 - IGHG2 chr14 106136181 - Exonic hg19 STAD TCGA-CD-8529-01A 67 93 Out-of-frame Inter-chr Seq+ 52702 ChimerSeq STARFusion TCGA_RNA-Seq GART-IGHG2 GART chr21 34889796 - IGHG2 chr14 106209407 - Exonic hg19 STAD TCGA-CD-8529-01A 57 93 Out-of-frame Inter-chr Seq+ 52703 ChimerSeq STARFusion TCGA_RNA-Seq GART-IGH@ GART chr21 34889796 - IGH@ chr14 106136181 - Exonic hg19 STAD TCGA-CD-8529-01A 42 60 Out-of-frame Inter-chr 32.33 52704 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1671-HTR1E KIAA1671 chr22 25577790 + HTR1E chr6 87724868 + Exonic hg19 STAD TCGA-CD-8529-01A 23 2 CDS-5'UTR Inter-chr q11.23 q14.3 Seq+ 52705 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-QRSL1 PVT1 chr8 128806980 + QRSL1 chr6 107110855 + Exonic hg19 STAD TCGA-CD-8529-01A 17 9 5'UTR-CDS Inter-chr q24.21 q21 Seq+ 52706 ChimerSeq STARFusion TCGA_RNA-Seq WASH3P-PEX5 WASH3P chr15 102506426 + PEX5 chr12 7370998 + Exonic hg19 STAD TCGA-CD-8529-01A 17 1 5'UTR-3'UTR Inter-chr q26.3 p13.31 52707 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-FADD PPFIA1 chr11 70118542 + FADD chr11 70052239 + Exonic hg19 STAD TCGA-CD-8529-01A 13 2 Out-of-frame Intra-chr q13.3 q13.3 Tumor suppressor gene Seq+ 52708 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL1-IFI6 RN7SL1 chr14 50053530 + IFI6 chr1 27992763 - Exonic hg19 STAD TCGA-CD-8529-01A 10 2 Out-of-frame Inter-chr q21.3 p35.3 52709 ChimerSeq STARFusion TCGA_RNA-Seq PCBP4-RPL29 PCBP4 chr3 52001342 - RPL29 chr3 52029918 - Exonic hg19 STAD TCGA-CD-8529-01A 6 13 5'UTR-5'UTR Intra-chr p21.2 p21.2 Seq+ 52710 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-CEACAM5 LYZ chr12 69747259 + CEACAM5 chr19 42233371 + Exonic hg19 STAD TCGA-CD-8529-01A 3 15 Out-of-frame Inter-chr q15 q13.2 52711 ChimerSeq STARFusion TCGA_RNA-Seq LYZ-CEACAM5 LYZ chr12 69747266 + CEACAM5 chr19 42233378 + Exonic hg19 STAD TCGA-CD-8529-01A 3 15 Out-of-frame Inter-chr q15 q13.2 52712 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL1-PIGR RN7SL1 chr14 50053378 + PIGR chr1 207102865 - Exonic hg19 STAD TCGA-CD-8529-01A 4 8 Out-of-frame Inter-chr q21.3 q32.1 52713 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL1-TAPBP RN7SL1 chr14 50053472 + TAPBP chr6 33268409 - Exonic hg19 STAD TCGA-CD-8529-01A 3 10 Out-of-frame Inter-chr q21.3 52714 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SPEG IGH@ chr14 106877620 - SPEG chr2 220358133 + Exonic hg19 STAD TCGA-BR-6706-01A 74 0 Out-of-frame Inter-chr 32.33 q35 CAMK:Trio 52715 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106209411 - Exonic hg19 STAD TCGA-BR-6706-01A 48 0 Out-of-frame Inter-chr q21.2 32.33 52716 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076851 + IGHG1 chr14 106209411 - Exonic hg19 STAD TCGA-BR-6706-01A 48 0 Out-of-frame Inter-chr q21.2 q32.33 52717 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076852 + IGH@ chr14 106111129 - Exonic hg19 STAD TCGA-BR-6706-01A 31 0 Out-of-frame Inter-chr q21.2 32.33 52718 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106237746 - Exonic hg19 STAD TCGA-BR-6706-01A 20 0 Out-of-frame Inter-chr q21.2 32.33 52719 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076857 + IGH@ chr14 106237740 - Exonic hg19 STAD TCGA-BR-6706-01A 16 0 Out-of-frame Inter-chr q21.2 32.33 52720 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-INSL4 EGFR chr7 55087058 + INSL4 chr9 5233654 + Exonic hg19 STAD TCGA-BR-6706-01A 15 0 In-Frame Inter-chr p11.2 TK:EGFR Oncogene p24.1 Seq+ 52721 ChimerSeq STARFusion TCGA_RNA-Seq EGFR-RCL1 EGFR chr7 55087058 + RCL1 chr9 4849447 + Exonic hg19 STAD TCGA-BR-6706-01A 14 0 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene p24.1 Seq+ 52722 ChimerSeq STARFusion TCGA_RNA-Seq RPL22-ACOT7 RPL22 chr1 6252990 - ACOT7 chr1 6324755 - Exonic hg19 STAD TCGA-BR-A452-01A 1764 610 Out-of-frame Intra-chr p36.31 p36.31 Seq+ 52723 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0907-UBQLN4 KIAA0907 chr1 155896467 - UBQLN4 chr1 156014014 - Exonic hg19 STAD TCGA-BR-A452-01A 456 126 In-Frame Intra-chr q22 q22 Seq+ 52724 ChimerSeq STARFusion TCGA_RNA-Seq THRAP3-MAP7D1 THRAP3 chr1 36690106 + MAP7D1 chr1 36643474 + Exonic hg19 STAD TCGA-BR-A452-01A 105 18 5'UTR-CDS Intra-chr p34.3 p34.3 Seq+ 52725 ChimerSeq STARFusion TCGA_RNA-Seq TESC-FBXO21 TESC chr12 117484364 - FBXO21 chr12 117584082 - Exonic hg19 STAD TCGA-BR-A452-01A 89 33 Out-of-frame Intra-chr q24.22 q24.22 Seq+ 52726 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC5-CTNND1 ZDHHC5 chr11 57456137 + CTNND1 chr11 57582866 + Exonic hg19 STAD TCGA-BR-A452-01A 80 21 Out-of-frame Intra-chr q12.1 q12.1 Tumor suppressor gene Seq+ 52727 ChimerSeq STARFusion TCGA_RNA-Seq POLA2-VPS51 POLA2 chr11 65035080 + VPS51 chr11 64878597 + Exonic hg19 STAD TCGA-BR-A452-01A 53 21 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 52728 ChimerSeq STARFusion TCGA_RNA-Seq TMED10-MLH3 TMED10 chr14 75614367 - MLH3 chr14 75506718 - Exonic hg19 STAD TCGA-BR-A452-01A 52 18 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene Seq+ 52729 ChimerSeq STARFusion TCGA_RNA-Seq TMED10-MLH3 TMED10 chr14 75614367 - MLH3 chr14 75505115 - Exonic hg19 STAD TCGA-BR-A452-01A 37 18 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene Seq+ 52730 ChimerSeq STARFusion TCGA_RNA-Seq DEAF1-CHID1 DEAF1 chr11 674536 - CHID1 chr11 870499 - Exonic hg19 STAD TCGA-BR-A452-01A 33 11 Out-of-frame Intra-chr Transcription factor p15.5 Seq+ 52731 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF12-POU2F3 ARHGEF12 chr11 120207984 + POU2F3 chr11 120139919 + Exonic hg19 STAD TCGA-BR-A452-01A 26 15 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene Transcription factor Seq+ 52732 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK5-ALDH2 MAPKAPK5 chr12 112318331 + ALDH2 chr12 112219722 + Exonic hg19 STAD TCGA-BR-A452-01A 21 6 In-Frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 Seq+ 52733 ChimerSeq STARFusion TCGA_RNA-Seq ADAM9-LETM2 ADAM9 chr8 38854679 + LETM2 chr8 38245468 + Exonic hg19 STAD TCGA-BR-A452-01A 21 4 5'UTR-5'UTR Intra-chr p11.23 Seq+ 52734 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK5-ALDH2 MAPKAPK5 chr12 112321572 + ALDH2 chr12 112213409 + Exonic hg19 STAD TCGA-BR-A452-01A 16 6 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 Seq+ 52735 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP1-CKAP5 ARHGAP1 chr11 46709723 - CKAP5 chr11 46792532 - Exonic hg19 STAD TCGA-BR-A452-01A 14 5 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 52736 ChimerSeq STARFusion TCGA_RNA-Seq CHTF18-RHOT2 CHTF18 chr16 841967 + RHOT2 chr16 718670 + Exonic hg19 STAD TCGA-BR-A452-01A 14 4 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 52737 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF12-POU2F3 ARHGEF12 chr11 120207984 + POU2F3 chr11 120168974 + Exonic hg19 STAD TCGA-BR-A452-01A 11 15 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene Transcription factor Seq+ 52738 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN14-FAM213A TSPAN14 chr10 82249070 + FAM213A chr10 82180239 + Exonic hg19 STAD TCGA-BR-A452-01A 12 4 In-Frame Intra-chr q23.1 q23.1 Seq+ 52739 ChimerSeq STARFusion TCGA_RNA-Seq CC2D1A-ZSWIM4 CC2D1A chr19 14020771 + ZSWIM4 chr19 13930171 + Exonic hg19 STAD TCGA-BR-A452-01A 11 7 In-Frame Intra-chr p13.12 Transcription factor p13.13 Seq+ 52740 ChimerSeq STARFusion TCGA_RNA-Seq RANBP2-IGKC RANBP2 chr2 109352613 + IGKC chr2 89160434 - Exonic hg19 STAD TCGA-BR-8487-01A 1322 1 Out-of-frame Intra-chr q13 p11.2 52741 ChimerSeq STARFusion TCGA_RNA-Seq REG1A-DDX52 REG1A chr2 79350526 + DDX52 chr17 35985986 - Exonic hg19 STAD TCGA-BR-8487-01A 14 0 Out-of-frame Inter-chr p12 q12 52742 ChimerSeq STARFusion TCGA_RNA-Seq PIGR-RN7SL2 PIGR chr1 207102492 - RN7SL2 chr14 50329539 - Exonic hg19 STAD TCGA-BR-8487-01A 3 15 Out-of-frame Inter-chr q32.1 q21.3 52743 ChimerSeq STARFusion TCGA_RNA-Seq ASAP2-HSPB6 ASAP2 chr2 9533651 + HSPB6 chr19 36247930 - Exonic hg19 STAD TCGA-BR-A453-01A 73 0 CDS-5'UTR Inter-chr p25.1 q13.12 52744 ChimerSeq STARFusion TCGA_RNA-Seq CPD-WNT3 CPD chr17 28712254 + WNT3 chr17 44851275 - Exonic hg19 STAD TCGA-CD-5799-01A 30 6 Out-of-frame Intra-chr q11.2 Tumor suppressor gene Seq+ 52745 ChimerSeq STARFusion TCGA_RNA-Seq ACACA-LGALS9 ACACA chr17 35627642 - LGALS9 chr17 25965289 + Exonic hg19 STAD TCGA-CD-5799-01A 24 4 In-Frame Intra-chr q11.2 Seq+ 52746 ChimerSeq STARFusion TCGA_RNA-Seq CPD-ERBB2 CPD chr17 28706532 + ERBB2 chr17 37875611 + Exonic hg19 STAD TCGA-CD-5799-01A 21 3 Out-of-frame Intra-chr q11.2 Tumor suppressor gene q12 Oncogene Seq+ 52747 ChimerSeq STARFusion TCGA_RNA-Seq PGAP3-STARD3 PGAP3 chr17 37840850 - STARD3 chr17 37816464 + Exonic hg19 STAD TCGA-CD-5799-01A 9 0 In-Frame Intra-chr q12 Oncogene q12 Seq+ 52748 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-TRAPPC9 PTK2 chr8 142011224 - TRAPPC9 chr8 141034176 - Exonic hg19 STAD TCGA-CD-5799-01A 8 1 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 52749 ChimerSeq STARFusion TCGA_RNA-Seq SHANK2-UBE2W SHANK2 chr11 70935743 - UBE2W chr8 74722864 - Exonic hg19 STAD TCGA-CD-5799-01A 8 0 5'UTR-CDS Inter-chr q13.4 q21.11 52750 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-STARD3 ERBB2 chr17 37856564 + STARD3 chr17 37809734 + Exonic hg19 STAD TCGA-CD-5799-01A 7 1 CDS-5'UTR Intra-chr q12 Oncogene q12 Seq+ 52751 ChimerSeq STARFusion TCGA_RNA-Seq ATN1-EHMT1 ATN1 chr12 7037547 + EHMT1 chr9 140637844 + Exonic hg19 STAD TCGA-CD-5799-01A 6 1 5'UTR-CDS Inter-chr p13.31 q34.3 52752 ChimerSeq STARFusion TCGA_RNA-Seq SNORD3A-UNC5B SNORD3A chr17 19091453 + UNC5B chr10 73050759 + Exonic hg19 STAD TCGA-CD-5799-01A 6 0 Out-of-frame Inter-chr p11.2 q22.1 Tumor suppressor gene 52753 ChimerSeq STARFusion TCGA_RNA-Seq TMSB10-TRABD2A TMSB10 chr2 85133731 + TRABD2A chr2 85133796 - Exonic hg19 STAD TCGA-CD-5799-01A 5 1 Out-of-frame Intra-chr p11.2 p11.2 52754 ChimerSeq STARFusion TCGA_RNA-Seq AP3D1-SLC6A8 AP3D1 chr19 2101455 - SLC6A8 chrX 152961595 + Exonic hg19 STAD TCGA-CD-5799-01A 5 0 Out-of-frame Inter-chr p13.3 q28 52755 ChimerSeq STARFusion TCGA_RNA-Seq CPD-WNT3 CPD chr17 28712240 + WNT3 chr17 44851275 - Exonic hg19 STAD TCGA-CD-5799-01A 3 6 Out-of-frame Intra-chr q11.2 Tumor suppressor gene Seq+ 52756 ChimerSeq STARFusion TCGA_RNA-Seq EPHB2-TEKT4P2 EPHB2 chr1 23037536 + TEKT4P2 chr21 9966380 - Exonic hg19 STAD TCGA-CD-5799-01A 3 2 CDS-3'UTR Inter-chr p36.12 Tumor suppressor gene p11.2 52757 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD54-RPLP0 ANKRD54 chr22 38236194 - RPLP0 chr12 120635265 - Exonic hg19 STAD TCGA-CD-5799-01A 3 0 Out-of-frame Inter-chr q13.1 q24.23 Seq+ 52758 ChimerSeq STARFusion TCGA_RNA-Seq CARM1-YIPF2 CARM1 chr19 11033418 + YIPF2 chr19 11033465 - Exonic hg19 STAD TCGA-CD-5799-01A 3 0 Out-of-frame Intra-chr p13.2 p13.2 52759 ChimerSeq STARFusion TCGA_RNA-Seq CDC42BPA-KCNK1 CDC42BPA chr1 227259909 - KCNK1 chr1 233802341 + Exonic hg19 STAD TCGA-CD-5799-01A 3 0 In-Frame Intra-chr q42.13 q42.2 52760 ChimerSeq STARFusion TCGA_RNA-Seq DDOST-LYZ DDOST chr1 20978617 - LYZ chr12 69747551 + Exonic hg19 STAD TCGA-CD-5799-01A 3 0 Out-of-frame Inter-chr p36.12 q15 52761 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPA0-VIPAS39 HNRNPA0 chr5 137088596 - VIPAS39 chr14 77894817 - Exonic hg19 STAD TCGA-CD-5799-01A 3 0 Out-of-frame Inter-chr q31.2 q24.3 52762 ChimerSeq STARFusion TCGA_RNA-Seq IGF2R-RHOG IGF2R chr6 160454139 + RHOG chr11 3849436 - Exonic hg19 STAD TCGA-CD-5799-01A 3 0 CDS-5'UTR Inter-chr q25.3 Oncogene Tumor suppressor gene p15.4 52763 ChimerSeq STARFusion TCGA_RNA-Seq LPCAT3-CNKSR3 LPCAT3 chr12 7085700 - CNKSR3 chr6 154712166 - Exonic hg19 STAD TCGA-CD-5799-01A 3 0 Out-of-frame Inter-chr p13.31 q25.2 52764 ChimerSeq STARFusion TCGA_RNA-Seq MIEN1-NUDT14 MIEN1 chr17 37885938 - NUDT14 chr14 105639495 - Exonic hg19 STAD TCGA-CD-5799-01A 3 0 Out-of-frame Inter-chr q12 q32.33 52765 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6C-RAB7A TNRC6C chr17 76102650 + RAB7A chr3 128532395 + Exonic hg19 STAD TCGA-CD-5799-01A 3 0 Out-of-frame Inter-chr q25.3 q21.3 Tumor suppressor gene 52766 ChimerSeq STARFusion TCGA_RNA-Seq CASK-ABCB4 CASK chrX 41782183 - ABCB4 chr7 87104787 - Exonic hg19 STAD TCGA-CD-5799-01A 2 1 CDS-5'UTR Inter-chr p11.4 CAMK:CASK q21.12 52767 ChimerSeq STARFusion TCGA_RNA-Seq CASK-ABCB4 CASK chrX 41782183 - ABCB4 chr7 87092224 - Exonic hg19 STAD TCGA-CD-5799-01A 2 1 Out-of-frame Inter-chr p11.4 CAMK:CASK q21.12 52768 ChimerSeq STARFusion TCGA_RNA-Seq ALG13-SCNN1A ALG13 chrX 110928331 + SCNN1A chr12 6465560 - Exonic hg19 STAD TCGA-CD-5799-01A 2 0 5'UTR-5'UTR Inter-chr q23 p13.31 52769 ChimerSeq STARFusion TCGA_RNA-Seq AMFR-CFDP1 AMFR chr16 56419831 - CFDP1 chr16 75339080 - Exonic hg19 STAD TCGA-CD-5799-01A 2 0 5'UTR-CDS Intra-chr q13 q23.1 52770 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT1-CCDC14 B4GALT1 chr9 33135187 - CCDC14 chr3 123667979 - Exonic hg19 STAD TCGA-CD-5799-01A 2 0 Out-of-frame Inter-chr p21.1 q21.1 52771 ChimerSeq STARFusion TCGA_RNA-Seq BAIAP2L1-BRI3 BAIAP2L1 chr7 97984354 - BRI3 chr7 97920423 + Exonic hg19 STAD TCGA-CD-5799-01A 2 0 Out-of-frame Intra-chr q22.1 q21.3 52772 ChimerSeq STARFusion TCGA_RNA-Seq BRAF-ZMYM1 BRAF chr7 140549911 - ZMYM1 chr1 35577373 + Exonic hg19 STAD TCGA-CD-5799-01A 2 0 Out-of-frame Inter-chr q34 TKL:RAF Oncogene p34.3 52773 ChimerSeq STARFusion TCGA_RNA-Seq C19orf48-BRK1 C19orf48 chr19 51305474 - BRK1 chr3 10167310 + Exonic hg19 STAD TCGA-CD-5799-01A 2 0 5'UTR-CDS Inter-chr q13.33 p25.3 Seq+ 52774 ChimerSeq STARFusion TCGA_RNA-Seq CAPN5-KIAA0232 CAPN5 chr11 76804859 + KIAA0232 chr4 6873301 + Exonic hg19 STAD TCGA-CD-5799-01A 2 0 In-Frame Inter-chr q13.5 p16.1 52775 ChimerSeq STARFusion TCGA_RNA-Seq CDC42EP5-HNRNPM CDC42EP5 chr19 54982766 - HNRNPM chr19 8550487 + Exonic hg19 STAD TCGA-CD-5799-01A 2 0 5'UTR-CDS Intra-chr p13.2 52776 ChimerSeq STARFusion TCGA_RNA-Seq CDH1-YWHAH CDH1 chr16 68772314 + YWHAH chr22 32352126 + Exonic hg19 STAD TCGA-CD-5799-01A 2 0 Out-of-frame Inter-chr q22.1 Oncogene Tumor suppressor gene q12.3 52777 ChimerSeq STARFusion TCGA_RNA-Seq CNOT2-IVNS1ABP CNOT2 chr12 70704797 + IVNS1ABP chr1 185274775 - Exonic hg19 STAD TCGA-CD-5799-01A 2 0 In-Frame Inter-chr q15 q25.3 52778 ChimerSeq STARFusion TCGA_RNA-Seq COG3-CD47 COG3 chr13 46090398 + CD47 chr3 107766139 - Exonic hg19 STAD TCGA-CD-5799-01A 2 0 In-Frame Inter-chr q14.13 q13.12 52779 ChimerSeq STARFusion TCGA_RNA-Seq FBXL5-CD38 FBXL5 chr4 15638117 - CD38 chr4 15850162 + Exonic hg19 STAD TCGA-CD-5799-01A 2 0 Out-of-frame Intra-chr p15.32 p15.32 52780 ChimerSeq STARFusion TCGA_RNA-Seq FNBP1L-PSMB7 FNBP1L chr1 93913862 + PSMB7 chr9 127167711 - Exonic hg19 STAD TCGA-CD-5799-01A 2 0 Out-of-frame Inter-chr p22.1 q33.3 52781 ChimerSeq STARFusion TCGA_RNA-Seq GULP1-PMS1 GULP1 chr2 189248616 + PMS1 chr2 190728469 + Exonic hg19 STAD TCGA-CD-5799-01A 2 0 5'UTR-CDS Intra-chr q32.1 q32.2 Oncogene 52782 ChimerSeq STARFusion TCGA_RNA-Seq HSPG2-IRF8 HSPG2 chr1 22263648 - IRF8 chr16 85942596 + Exonic hg19 STAD TCGA-CD-5799-01A 2 0 In-Frame Inter-chr p36.12 q24.1 Tumor suppressor gene Transcription factor 52783 ChimerSeq STARFusion TCGA_RNA-Seq JAK1-RAVER2 JAK1 chr1 65303615 - RAVER2 chr1 65296522 + Exonic hg19 STAD TCGA-CD-5799-01A 2 0 Out-of-frame Intra-chr p31.3 TK:JakA Oncogene p31.3 52784 ChimerSeq STARFusion TCGA_RNA-Seq LNX1-SCFD2 LNX1 chr4 54439790 - SCFD2 chr4 54011749 - Exonic hg19 STAD TCGA-CD-5799-01A 2 0 Out-of-frame Intra-chr q12 q12 52785 ChimerSeq STARFusion TCGA_RNA-Seq LRP5-C11orf24 LRP5 chr11 68133170 + C11orf24 chr11 68035719 - Exonic hg19 STAD TCGA-CD-5799-01A 2 0 CDS-5'UTR Intra-chr q13.2 q13.2 52786 ChimerSeq STARFusion TCGA_RNA-Seq MAOA-CCDC132 MAOA chrX 43552675 + CCDC132 chr7 92905477 + Exonic hg19 STAD TCGA-CD-5799-01A 2 0 In-Frame Inter-chr p11.3 52787 ChimerSeq STARFusion TCGA_RNA-Seq MYL6-LSM5 MYL6 chr12 56553406 + LSM5 chr7 32528956 - Exonic hg19 STAD TCGA-CD-5799-01A 2 0 In-Frame Inter-chr q13.2 p14.3 52788 ChimerSeq STARFusion TCGA_RNA-Seq PLXNA1-SH3YL1 PLXNA1 chr3 126731001 + SH3YL1 chr2 230044 - Exonic hg19 STAD TCGA-CD-5799-01A 2 0 In-Frame Inter-chr q21.3 p25.3 52789 ChimerSeq STARFusion TCGA_RNA-Seq PSMA3-LGALS3 PSMA3 chr14 58737716 + LGALS3 chr14 55611834 + Exonic hg19 STAD TCGA-CD-5799-01A 2 0 In-Frame Intra-chr q23.1 q22.3 52790 ChimerSeq STARFusion TCGA_RNA-Seq PSMD4-NMI PSMD4 chr1 151227284 + NMI chr2 152139468 - Exonic hg19 STAD TCGA-CD-5799-01A 2 0 CDS-5'UTR Inter-chr q21.3 q23.3 52791 ChimerSeq STARFusion TCGA_RNA-Seq PTPN2-C14orf159 PTPN2 chr18 12814202 - C14orf159 chr14 91691028 + Exonic hg19 STAD TCGA-CD-5799-01A 2 0 In-Frame Inter-chr p11.21 Tumor suppressor gene q32.11 52792 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-EEF1D RCC1 chr1 28832596 + EEF1D chr8 144669022 - Exonic hg19 STAD TCGA-CD-5799-01A 2 0 5'UTR-5'UTR Inter-chr p35.3 Seq+ 52793 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-NDUFV3 RCC1 chr1 28834672 + NDUFV3 chr21 44328974 + Exonic hg19 STAD TCGA-CD-5799-01A 2 0 5'UTR-CDS Inter-chr p35.3 q22.3 52794 ChimerSeq STARFusion TCGA_RNA-Seq RNF213-TAF15 RNF213 chr17 78310178 + TAF15 chr17 34161570 + Exonic hg19 STAD TCGA-CD-5799-01A 2 0 Out-of-frame Intra-chr q25.3 Oncogene q12 52795 ChimerSeq STARFusion TCGA_RNA-Seq SLC36A4-OXSR1 SLC36A4 chr11 92887274 - OXSR1 chr3 38292894 + Exonic hg19 STAD TCGA-CD-5799-01A 2 0 In-Frame Inter-chr q21 p22.2 52796 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-EEF1D SNHG3 chr1 28832596 + EEF1D chr8 144669022 - Exonic hg19 STAD TCGA-CD-5799-01A 2 0 5'UTR-5'UTR Inter-chr p35.3 52797 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-NDUFV3 SNHG3 chr1 28834672 + NDUFV3 chr21 44328974 + Exonic hg19 STAD TCGA-CD-5799-01A 2 0 5'UTR-CDS Inter-chr p35.3 q22.3 52798 ChimerSeq STARFusion TCGA_RNA-Seq SNHG8-CCDC88C SNHG8 chr4 119200292 + CCDC88C chr14 91826055 - Exonic hg19 STAD TCGA-CD-5799-01A 2 0 5'UTR-CDS Inter-chr q26 q32.12 52799 ChimerSeq STARFusion TCGA_RNA-Seq SNHG8-EEF1D SNHG8 chr4 119200292 + EEF1D chr8 144669022 - Exonic hg19 STAD TCGA-CD-5799-01A 2 0 5'UTR-5'UTR Inter-chr q26 52800 ChimerSeq STARFusion TCGA_RNA-Seq SNX12-GYG2P1 SNX12 chrX 70282704 - GYG2P1 chrY 14519108 - Exonic hg19 STAD TCGA-CD-5799-01A 2 0 CDS-3'UTR Inter-chr q13.1 q11.221 52801 ChimerSeq STARFusion TCGA_RNA-Seq TMEM38B-UBXN7 TMEM38B chr9 108457053 + UBXN7 chr3 196134264 - Exonic hg19 STAD TCGA-CD-5799-01A 2 0 In-Frame Inter-chr q31.2 q29 52802 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS4-HNRNPH3 TMPRSS4 chr11 117988169 + HNRNPH3 chr10 70096956 + Exonic hg19 STAD TCGA-CD-5799-01A 2 0 CDS-5'UTR Inter-chr q23.3 q21.3 52803 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN10-RACGAP1 TSPAN10 chr17 79604432 + RACGAP1 chr12 50386438 - Exonic hg19 STAD TCGA-CD-5799-01A 2 0 5'UTR-CDS Inter-chr q25.3 q13.12 52804 ChimerSeq STARFusion TCGA_RNA-Seq TUBD1-TBX6 TUBD1 chr17 57970058 - TBX6 chr16 30098172 - Exonic hg19 STAD TCGA-CD-5799-01A 2 0 5'UTR-CDS Inter-chr q23.1 p11.2 Transcription factor Seq+ 52805 ChimerSeq STARFusion TCGA_RNA-Seq UNK-DTYMK UNK chr17 73781065 + DTYMK chr2 242619734 - Exonic hg19 STAD TCGA-CD-5799-01A 2 0 In-Frame Inter-chr q25.1 q37.3 52806 ChimerSeq STARFusion TCGA_RNA-Seq USP34-GNAS USP34 chr2 61647881 - GNAS chr20 57470667 + Exonic hg19 STAD TCGA-CD-5799-01A 2 0 Out-of-frame Inter-chr p15 q13.32 Oncogene 52807 ChimerSeq STARFusion TCGA_RNA-Seq VDR-AGR2 VDR chr12 48272751 - AGR2 chr7 16841427 - Exonic hg19 STAD TCGA-CD-5799-01A 2 0 CDS-5'UTR Inter-chr q13.11 Tumor suppressor gene Transcription factor p21.1 52808 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC16-MMS19 ZDHHC16 chr10 99206110 + MMS19 chr10 99228163 - Exonic hg19 STAD TCGA-CD-5799-01A 2 0 5'UTR-CDS Intra-chr q24.1 q24.1 52809 ChimerSeq STARFusion TCGA_RNA-Seq ZFYVE28-CTBP1 ZFYVE28 chr4 2420012 - CTBP1 chr4 1235307 - Exonic hg19 STAD TCGA-CD-5799-01A 2 0 CDS-5'UTR Intra-chr p16.3 p16.3 52810 ChimerSeq STARFusion TCGA_RNA-Seq ZNF641-ANXA3 ZNF641 chr12 48738382 - ANXA3 chr4 79518473 + Exonic hg19 STAD TCGA-CD-5799-01A 2 0 In-Frame Inter-chr q13.11 Transcription factor q21.21 52811 ChimerSeq STARFusion TCGA_RNA-Seq RNF168-SMCO1 RNF168 chr3 196229744 - SMCO1 chr3 196235202 - Exonic hg19 STAD TCGA-CD-8535-01A 155 62 Out-of-frame Intra-chr q29 q29 Seq+ 52812 ChimerSeq STARFusion TCGA_RNA-Seq SEPT7P2-PSPH SEPT7P2 chr7 45808259 - PSPH chr7 56088924 - Exonic hg19 STAD TCGA-CD-8535-01A 91 0 3'UTR-5'UTR Intra-chr p12.3 p11.2 Seq+ 52813 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT3-PDXK AGPAT3 chr21 45323900 + PDXK chr21 45153950 + Exonic hg19 STAD TCGA-CD-8535-01A 49 14 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 52814 ChimerSeq STARFusion TCGA_RNA-Seq CDC5L-HSP90AB1 CDC5L chr6 44376369 + HSP90AB1 chr6 44216367 + Exonic hg19 STAD TCGA-CD-8535-01A 45 22 5'UTR-5'UTR Intra-chr p21.1 Transcription factor p21.1 Oncogene Seq+ 52815 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142481912 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-CD-8535-01A 48 0 3'UTR-CDS Inter-chr q13.41 52816 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142471340 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-CD-8535-01A 47 0 3'UTR-CDS Inter-chr q13.41 52817 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142460418 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-CD-8535-01A 47 0 In-Frame Inter-chr q13.41 52818 ChimerSeq STARFusion TCGA_RNA-Seq WWOX-VAT1L WWOX chr16 78133782 + VAT1L chr16 77850818 + Exonic hg19 STAD TCGA-CD-8535-01A 45 8 In-Frame Intra-chr q23.1 Tumor suppressor gene q23.1 Seq+ 52819 ChimerSeq STARFusion TCGA_RNA-Seq RPL37A-SMARCAL1 RPL37A chr2 217364754 + SMARCAL1 chr2 217332667 + Exonic hg19 STAD TCGA-CD-8535-01A 42 13 In-Frame Intra-chr q35 q35 52820 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL5-MRGPRE OSBPL5 chr11 3140777 - MRGPRE chr11 3250090 - Exonic hg19 STAD TCGA-CD-8535-01A 39 16 CDS-5'UTR Intra-chr p15.4 p15.4 Seq+ 52821 ChimerSeq STARFusion TCGA_RNA-Seq SLC12A2-PDHA1 SLC12A2 chr5 127420402 + PDHA1 chrX 19367430 + Exonic hg19 STAD TCGA-CD-8535-01A 35 20 In-Frame Inter-chr q23.3 p22.12 Seq+ 52822 ChimerSeq STARFusion TCGA_RNA-Seq KMT2E-KANSL1 KMT2E chr7 104681470 + KANSL1 chr17 44249598 - Exonic hg19 STAD TCGA-CD-8535-01A 35 7 Out-of-frame Inter-chr q22.3 Seq+ 52823 ChimerSeq STARFusion TCGA_RNA-Seq CLTA-RIN2 CLTA chr9 36205689 + RIN2 chr20 19981391 + Exonic hg19 STAD TCGA-CD-8535-01A 27 38 Out-of-frame Inter-chr p13.3 p11.23 Seq+ 52824 ChimerSeq STARFusion TCGA_RNA-Seq CCNB2-RNF111 CCNB2 chr15 59409567 + RNF111 chr15 59386982 + Exonic hg19 STAD TCGA-CD-8535-01A 28 18 Out-of-frame Intra-chr q22.2 q22.1 Tumor suppressor gene Seq+ 52825 ChimerSeq STARFusion TCGA_RNA-Seq STRBP-DENND1A STRBP chr9 125976079 - DENND1A chr9 126220176 - Exonic hg19 STAD TCGA-CD-8535-01A 19 15 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 52826 ChimerSeq STARFusion TCGA_RNA-Seq FAM131A-HTR3D FAM131A chr3 184055159 + HTR3D chr3 183752845 + Exonic hg19 STAD TCGA-CD-8535-01A 16 14 5'UTR-5'UTR Intra-chr q27.1 q27.1 Seq+ 52827 ChimerSeq STARFusion TCGA_RNA-Seq CLTA-RIN2 CLTA chr9 36204176 + RIN2 chr20 19981397 + Exonic hg19 STAD TCGA-CD-8535-01A 6 38 Out-of-frame Inter-chr p13.3 p11.23 Seq+ 52828 ChimerSeq STARFusion TCGA_RNA-Seq TCF19-PSORS1C1 TCF19 chr6 31127484 + PSORS1C1 chr6 31107418 + Exonic hg19 STAD TCGA-CD-8535-01A 10 7 Out-of-frame Intra-chr Seq+ 52829 ChimerSeq STARFusion TCGA_RNA-Seq CASZ1-C1orf127 CASZ1 chr1 10856621 - C1orf127 chr1 11030125 - Exonic hg19 STAD TCGA-CD-8535-01A 10 2 5'UTR-CDS Intra-chr p36.22 Transcription factor p36.22 Seq+ 52830 ChimerSeq STARFusion TCGA_RNA-Seq KMT2E-MAPT KMT2E chr7 104707254 + MAPT chr17 44039687 + Exonic hg19 STAD TCGA-CD-8535-01A 8 4 Out-of-frame Inter-chr q22.3 Seq+ 52831 ChimerSeq STARFusion TCGA_RNA-Seq FAM131A-HTR3D FAM131A chr3 184056317 + HTR3D chr3 183752845 + Exonic hg19 STAD TCGA-CD-8535-01A 4 13 CDS-5'UTR Intra-chr q27.1 q27.1 Seq+ 52832 ChimerSeq STARFusion TCGA_RNA-Seq FAM131A-HTR3D FAM131A chr3 184053911 + HTR3D chr3 183752845 + Exonic hg19 STAD TCGA-CD-8535-01A 4 13 5'UTR-5'UTR Intra-chr q27.1 q27.1 Seq+ 52833 ChimerSeq STARFusion TCGA_RNA-Seq STRBP-DENND1A STRBP chr9 126030715 - DENND1A chr9 126220176 - Exonic hg19 STAD TCGA-CD-8535-01A 2 15 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 52834 ChimerSeq STARFusion TCGA_RNA-Seq FAM131A-HTR3D FAM131A chr3 184055159 + HTR3D chr3 183755809 + Exonic hg19 STAD TCGA-CD-8535-01A 2 13 5'UTR-CDS Intra-chr q27.1 q27.1 Seq+ 52835 ChimerSeq STARFusion TCGA_RNA-Seq PLCB1-DES PLCB1 chr20 8696995 + DES chr2 220291260 + Exonic hg19 STAD TCGA-BR-A4J9-01A 3 1 CDS-3'UTR Inter-chr p12.3 q35 52836 ChimerSeq STARFusion TCGA_RNA-Seq SPSB1-H6PD SPSB1 chr1 9353130 + H6PD chr1 9322118 + Exonic hg19 STAD TCGA-BR-A4J9-01A 3 1 5'UTR-CDS Intra-chr p36.22 p36.22 Seq+ 52837 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L-PIAS1 DIS3L chr15 66615176 + PIAS1 chr15 68480367 + Exonic hg19 STAD TCGA-BR-A4J9-01A 3 0 Out-of-frame Intra-chr q22.31 q23 Tumor suppressor gene 52838 ChimerSeq STARFusion TCGA_RNA-Seq GLRB-RPL13A GLRB chr4 158091782 + RPL13A chr19 49994295 + Exonic hg19 STAD TCGA-BR-A4J9-01A 3 0 Out-of-frame Inter-chr q32.1 q13.33 52839 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-FLNA IGHG1 chr14 106208402 - FLNA chrX 153602994 - Exonic hg19 STAD TCGA-BR-A4J9-01A 2 4 Out-of-frame Inter-chr q32.33 q28 Tumor suppressor gene 52840 ChimerSeq STARFusion TCGA_RNA-Seq TFDP2-CTNNB1 TFDP2 chr3 141868025 - CTNNB1 chr3 41265512 + Exonic hg19 STAD TCGA-BR-A4J9-01A 3 0 5'UTR-5'UTR Intra-chr q23 Transcription factor p22.1 Oncogene 52841 ChimerSeq STARFusion TCGA_RNA-Seq TMEM198-CHPF TMEM198 chr2 220408516 + CHPF chr2 220406496 - Exonic hg19 STAD TCGA-BR-A4J9-01A 3 0 Out-of-frame Intra-chr q35 q35 52842 ChimerSeq STARFusion TCGA_RNA-Seq ADAM15-IRF3 ADAM15 chr1 155030917 + IRF3 chr19 50163090 - Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 In-Frame Inter-chr q21.3 q13.33 Tumor suppressor gene Transcription factor 52843 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP15-ZEB2 ARHGAP15 chr2 144314054 + ZEB2 chr2 145187593 - Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 In-Frame Intra-chr q22.2 q22.3 Transcription factor 52844 ChimerSeq STARFusion TCGA_RNA-Seq B2M-CCND3 B2M chr15 45003811 + CCND3 chr6 41908323 - Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 Out-of-frame Inter-chr Oncogene p21.1 52845 ChimerSeq STARFusion TCGA_RNA-Seq BRAF-ADCK2 BRAF chr7 140624366 - ADCK2 chr7 140389397 + Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 In-Frame Intra-chr q34 TKL:RAF Oncogene q34 Atypical:ABC1 52846 ChimerSeq STARFusion TCGA_RNA-Seq C4B-TPM2 C4B chr6 32002108 + TPM2 chr9 35684312 - Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 Out-of-frame Inter-chr p13.3 52847 ChimerSeq STARFusion TCGA_RNA-Seq CAPNS1-EVPL CAPNS1 chr19 36631059 + EVPL chr17 74013992 - Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 5'UTR-CDS Inter-chr q13.12 q25.1 52848 ChimerSeq STARFusion TCGA_RNA-Seq CEP63-MEF2C CEP63 chr3 134270854 + MEF2C chr5 88119747 - Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 CDS-5'UTR Inter-chr q22.2 q14.3 Transcription factor 52849 ChimerSeq STARFusion TCGA_RNA-Seq CRIM1-YWHAQ CRIM1 chr2 36749456 + YWHAQ chr2 9731644 - Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 Out-of-frame Intra-chr p22.2 p25.1 52850 ChimerSeq STARFusion TCGA_RNA-Seq CSPG4-THAP10 CSPG4 chr15 76005009 - THAP10 chr15 71175247 - Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 Out-of-frame Intra-chr q24.2 q23 Transcription factor 52851 ChimerSeq STARFusion TCGA_RNA-Seq DAZAP1-SHC2 DAZAP1 chr19 1407801 + SHC2 chr19 425231 - Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 Out-of-frame Intra-chr p13.3 p13.3 52852 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L2-WDR75 DIS3L2 chr2 233028342 + WDR75 chr2 190313105 + Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 In-Frame Intra-chr q37.1 q32.2 Seq+ 52853 ChimerSeq STARFusion TCGA_RNA-Seq DNMBP-CWF19L1 DNMBP chr10 101639568 - CWF19L1 chr10 102020076 - Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 Out-of-frame Intra-chr q24.2 q24.31 52854 ChimerSeq STARFusion TCGA_RNA-Seq FANCL-DNAJC15 FANCL chr2 58390569 - DNAJC15 chr13 43659904 + Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 Out-of-frame Inter-chr p16.1 q14.11 52855 ChimerSeq STARFusion TCGA_RNA-Seq GPATCH8-AKNA GPATCH8 chr17 42501717 - AKNA chr9 117113301 - Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 Out-of-frame Inter-chr q21.31 q32 Transcription factor 52856 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPK-ZBTB11 HNRNPK chr9 86586188 - ZBTB11 chr3 101370527 - Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 Out-of-frame Inter-chr q21.32 q12.3 Transcription factor 52857 ChimerSeq STARFusion TCGA_RNA-Seq HSP90B1-NR2C1 HSP90B1 chr12 104325401 + NR2C1 chr12 95451654 - Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q22 Transcription factor 52858 ChimerSeq STARFusion TCGA_RNA-Seq INPP5A-ACTN1 INPP5A chr10 134464009 + ACTN1 chr14 69392389 - Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 In-Frame Inter-chr q26.3 q24.1 52859 ChimerSeq STARFusion TCGA_RNA-Seq IST1-TOP1 IST1 chr16 71929492 + TOP1 chr20 39741422 + Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 5'UTR-CDS Inter-chr q22.2 q12 Oncogene 52860 ChimerSeq STARFusion TCGA_RNA-Seq KATNBL1-EMC4 KATNBL1 chr15 34455761 - EMC4 chr15 34519894 + Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 Out-of-frame Intra-chr q14 q14 52861 ChimerSeq STARFusion TCGA_RNA-Seq KIAA2026-JAK2 KIAA2026 chr9 5968019 - JAK2 chr9 5126333 + Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 Out-of-frame Intra-chr p24.1 p24.1 TK:JakA Oncogene 52862 ChimerSeq STARFusion TCGA_RNA-Seq L3HYPDH-SYNPO L3HYPDH chr14 59942587 - SYNPO chr5 150035966 + Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 Out-of-frame Inter-chr q23.1 q33.1 52863 ChimerSeq STARFusion TCGA_RNA-Seq LPHN2-IFI44L LPHN2 chr1 82421744 + IFI44L chr1 79102717 + Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 Out-of-frame Intra-chr p31.1 52864 ChimerSeq STARFusion TCGA_RNA-Seq LTBP1-PPP1CB LTBP1 chr2 33360027 + PPP1CB chr2 28999717 + Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 In-Frame Intra-chr p22.3 p23.2 52865 ChimerSeq STARFusion TCGA_RNA-Seq PLS3-VASP PLS3 chrX 114795587 + VASP chr19 46020921 + Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 5'UTR-CDS Inter-chr q23 q13.32 52866 ChimerSeq STARFusion TCGA_RNA-Seq PPM1L-SSBP1 PPM1L chr3 160679698 + SSBP1 chr7 141441969 + Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 Out-of-frame Inter-chr q25.33 Tumor suppressor gene 52867 ChimerSeq STARFusion TCGA_RNA-Seq PTCHD3P1-EIF2AK1 PTCHD3P1 chr10 29704341 + EIF2AK1 chr7 6089676 - Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 Out-of-frame Inter-chr p11.23 p22.1 52868 ChimerSeq STARFusion TCGA_RNA-Seq RBMS1-DUSP22 RBMS1 chr2 161349800 - DUSP22 chr6 311880 + Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 Out-of-frame Inter-chr q24.2 p25.3 Tumor suppressor gene 52869 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-ACAP1 RCC1 chr1 28835417 + ACAP1 chr17 7246698 + Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 5'UTR-CDS Inter-chr p35.3 p13.1 52870 ChimerSeq STARFusion TCGA_RNA-Seq SHROOM4-PHF8 SHROOM4 chrX 50556902 - PHF8 chrX 53989372 - Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 Out-of-frame Intra-chr p11.22 p11.22 52871 ChimerSeq STARFusion TCGA_RNA-Seq SMYD3-CNST SMYD3 chr1 246490503 - CNST chr1 246754814 + Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 CDS-5'UTR Intra-chr q44 Transcription factor q44 52872 ChimerSeq STARFusion TCGA_RNA-Seq SUCO-RABGAP1L SUCO chr1 172502637 + RABGAP1L chr1 174244971 + Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 Out-of-frame Intra-chr q24.3 q25.1 52873 ChimerSeq STARFusion TCGA_RNA-Seq TMEM87A-CAPN8 TMEM87A chr15 42525411 - CAPN8 chr1 223718212 - Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 In-Frame Inter-chr q15.1 q41 52874 ChimerSeq STARFusion TCGA_RNA-Seq TTC3-PHF16 TTC3 chr21 38445664 + PHF16 chrX 46844285 + Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 5'UTR-5'UTR Inter-chr q22.13 52875 ChimerSeq STARFusion TCGA_RNA-Seq VPS29-GLT8D2 VPS29 chr12 110939854 - GLT8D2 chr12 104397084 - Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 Out-of-frame Intra-chr q24.11 q23.3 52876 ChimerSeq STARFusion TCGA_RNA-Seq WDR13-FLNA WDR13 chrX 48456425 + FLNA chrX 153578235 - Exonic hg19 STAD TCGA-BR-A4J9-01A 2 0 Out-of-frame Intra-chr p11.23 q28 Tumor suppressor gene 52877 ChimerSeq STARFusion TCGA_RNA-Seq RPS8-CCL2 RPS8 chr1 45241604 + CCL2 chr17 32582309 + Exonic hg19 STAD TCGA-IN-7808-01A 10 0 Out-of-frame Inter-chr p34.1 q12 52878 ChimerSeq STARFusion TCGA_RNA-Seq SNORD55-CCL2 SNORD55 chr1 45241604 + CCL2 chr17 32582309 + Exonic hg19 STAD TCGA-IN-7808-01A 10 0 Out-of-frame Inter-chr p34.1 q12 52879 ChimerSeq STARFusion TCGA_RNA-Seq PAMR1-TRIM44 PAMR1 chr11 35513593 - TRIM44 chr11 35827908 + Exonic hg19 STAD TCGA-IN-7808-01A 7 1 Out-of-frame Intra-chr p13 p13 52880 ChimerSeq STARFusion TCGA_RNA-Seq CCDC9-SAE1 CCDC9 chr19 47770049 + SAE1 chr19 47673075 + Exonic hg19 STAD TCGA-IN-7808-01A 4 1 Out-of-frame Intra-chr q13.32 q13.32 Seq+ 52881 ChimerSeq STARFusion TCGA_RNA-Seq EDF1-SSNA1 EDF1 chr9 139757358 - SSNA1 chr9 140084259 + Exonic hg19 STAD TCGA-IN-7808-01A 4 0 Out-of-frame Intra-chr q34.3 q34.3 52882 ChimerSeq STARFusion TCGA_RNA-Seq MED13-WAC MED13 chr17 60022930 - WAC chr10 28908890 + Exonic hg19 STAD TCGA-IN-7808-01A 4 0 Out-of-frame Inter-chr q23.2 p12.1 52883 ChimerSeq STARFusion TCGA_RNA-Seq C11orf74-PAMR1 C11orf74 chr11 36616142 + PAMR1 chr11 35515820 - Exonic hg19 STAD TCGA-IN-7808-01A 3 0 5'UTR-CDS Intra-chr p12 p13 Seq+ 52884 ChimerSeq STARFusion TCGA_RNA-Seq CDC42EP5-RPL28 CDC42EP5 chr19 54982766 - RPL28 chr19 55897718 + Exonic hg19 STAD TCGA-IN-7808-01A 3 0 5'UTR-5'UTR Intra-chr q13.42 52885 ChimerSeq STARFusion TCGA_RNA-Seq DNAH5-IGHJ4 DNAH5 chr5 13932154 - IGHJ4 chr14 106330464 - Exonic hg19 STAD TCGA-IN-7808-01A 3 0 Out-of-frame Inter-chr p15.2 52886 ChimerSeq STARFusion TCGA_RNA-Seq LNX2-CDX2 LNX2 chr13 28194512 - CDX2 chr13 28539152 - Exonic hg19 STAD TCGA-IN-7808-01A 3 0 5'UTR-CDS Intra-chr q12.2 q12.2 Tumor suppressor gene Transcription factor 52887 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHG1-FYN PLEKHG1 chr6 150921153 + FYN chr6 111983150 - Exonic hg19 STAD TCGA-IN-7808-01A 3 0 5'UTR-CDS Intra-chr q25.1 q21 TK:Src 52888 ChimerSeq STARFusion TCGA_RNA-Seq PRR5L-PAMR1 PRR5L chr11 36453458 + PAMR1 chr11 35463243 - Exonic hg19 STAD TCGA-IN-7808-01A 3 0 Out-of-frame Intra-chr p13 p13 52889 ChimerSeq STARFusion TCGA_RNA-Seq PRR5L-PAMR1 PRR5L chr11 36453460 + PAMR1 chr11 35463241 - Exonic hg19 STAD TCGA-IN-7808-01A 3 0 In-Frame Intra-chr p13 p13 52890 ChimerSeq STARFusion TCGA_RNA-Seq PTPN1-SERF2 PTPN1 chr20 49200994 + SERF2 chr15 44084554 + Exonic hg19 STAD TCGA-IN-7808-01A 3 0 Out-of-frame Inter-chr q13.13 Tumor suppressor gene q15.3 52891 ChimerSeq STARFusion TCGA_RNA-Seq SF3B2-RPL11 SF3B2 chr11 65828202 + RPL11 chr1 24022288 + Exonic hg19 STAD TCGA-IN-7808-01A 3 0 In-Frame Inter-chr q13.1 p36.11 Tumor suppressor gene 52892 ChimerSeq STARFusion TCGA_RNA-Seq ST8SIA1-NAA16 ST8SIA1 chr12 22486931 - NAA16 chr13 41929280 + Exonic hg19 STAD TCGA-IN-7808-01A 3 0 Out-of-frame Inter-chr p12.1 q14.11 Seq+ 52893 ChimerSeq STARFusion TCGA_RNA-Seq SULT2B1-CORO1B SULT2B1 chr19 49100073 + CORO1B chr11 67205838 - Exonic hg19 STAD TCGA-IN-7808-01A 3 0 Out-of-frame Inter-chr q13.33 q13.2 52894 ChimerSeq STARFusion TCGA_RNA-Seq WNK2-ITGB1BP1 WNK2 chr9 96029526 + ITGB1BP1 chr2 9545250 - Exonic hg19 STAD TCGA-IN-7808-01A 3 0 Out-of-frame Inter-chr q22.31 Tumor suppressor gene p25.1 52895 ChimerSeq STARFusion TCGA_RNA-Seq RABL6-SEC16A RABL6 chr9 139723936 + SEC16A chr9 139355726 - Exonic hg19 STAD TCGA-IN-7808-01A 2 2 Out-of-frame Intra-chr q34.3 q34.3 52896 ChimerSeq STARFusion TCGA_RNA-Seq ADRBK1-GPR35 ADRBK1 chr11 67034283 + GPR35 chr2 241569366 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 In-Frame Inter-chr q37.3 52897 ChimerSeq STARFusion TCGA_RNA-Seq AGRN-PIEZO1 AGRN chr1 970704 + PIEZO1 chr16 88815887 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 In-Frame Inter-chr p36.33 q24.3 52898 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD33B-BASP1 ANKRD33B chr5 10564945 + BASP1 chr5 17275317 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 CDS-5'UTR Intra-chr p15.2 p15.1 Tumor suppressor gene 52899 ChimerSeq STARFusion TCGA_RNA-Seq ANXA11-DRP2 ANXA11 chr10 81965099 - DRP2 chrX 100475068 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 5'UTR-5'UTR Inter-chr q22.3 q22.1 52900 ChimerSeq STARFusion TCGA_RNA-Seq ATG10-FBXO38 ATG10 chr5 81354421 + FBXO38 chr5 147812987 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Intra-chr q14.1 q32 52901 ChimerSeq STARFusion TCGA_RNA-Seq BANP-SLC9A3R2 BANP chr16 88105818 + SLC9A3R2 chr16 2086325 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 In-Frame Intra-chr q24.2 Tumor suppressor gene p13.3 52902 ChimerSeq STARFusion TCGA_RNA-Seq BCL2-ATXN7L1 BCL2 chr18 60985315 - ATXN7L1 chr7 105305735 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Inter-chr q21.33 Oncogene q22.3 52903 ChimerSeq STARFusion TCGA_RNA-Seq BRD3-VAV2 BRD3 chr9 136933067 - VAV2 chr9 136699462 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 5'UTR-CDS Intra-chr q34.2 Atypical:BRD Oncogene q34.2 52904 ChimerSeq STARFusion TCGA_RNA-Seq C1orf63-BBS9 C1orf63 chr1 25594231 - BBS9 chr7 33573566 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 5'UTR-CDS Inter-chr p14.3 52905 ChimerSeq STARFusion TCGA_RNA-Seq CALU-C7orf73 CALU chr7 128379486 + C7orf73 chr7 135357501 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 5'UTR-CDS Intra-chr q32.1 q33 Seq+ 52906 ChimerSeq STARFusion TCGA_RNA-Seq CARD11-ADAM28 CARD11 chr7 2983846 - ADAM28 chr8 24167676 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Inter-chr p22.2 Oncogene p21.2 52907 ChimerSeq STARFusion TCGA_RNA-Seq CARD8-SEC24D CARD8 chr19 48737660 - SEC24D chr4 119659534 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Inter-chr q13.33 q26 52908 ChimerSeq STARFusion TCGA_RNA-Seq CAST-ERAP2 CAST chr5 95998201 + ERAP2 chr5 96244665 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Intra-chr q15 q15 52909 ChimerSeq STARFusion TCGA_RNA-Seq CEP85L-HDAC2 CEP85L chr6 118953616 - HDAC2 chr6 114281182 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 In-Frame Intra-chr q22.31 q21 52910 ChimerSeq STARFusion TCGA_RNA-Seq CHST11-APPL2 CHST11 chr12 104851292 + APPL2 chr12 105623001 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Intra-chr q23.3 q23.3 52911 ChimerSeq STARFusion TCGA_RNA-Seq CLIC4-EIF4G3 CLIC4 chr1 25072116 + EIF4G3 chr1 21415706 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 CDS-5'UTR Intra-chr p36.11 p36.12 52912 ChimerSeq STARFusion TCGA_RNA-Seq CLOCK-HDGFRP3 CLOCK chr4 56412949 - HDGFRP3 chr15 83832827 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 5'UTR-CDS Inter-chr q12 Transcription factor 52913 ChimerSeq STARFusion TCGA_RNA-Seq COL27A1-GET4 COL27A1 chr9 117047057 + GET4 chr7 925693 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Inter-chr q32 p22.3 52914 ChimerSeq STARFusion TCGA_RNA-Seq COL27A1-SUN1 COL27A1 chr9 117047057 + SUN1 chr7 925693 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 CDS-3'UTR Inter-chr q32 p22.3 52915 ChimerSeq STARFusion TCGA_RNA-Seq CRYBG3-MINA CRYBG3 chr3 97618107 + MINA chr3 97664186 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Intra-chr q11.2 52916 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP1-DNM3OS CTDSP1 chr2 219267128 + DNM3OS chr1 172113577 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 CDS-3'UTR Inter-chr q35 q24.3 52917 ChimerSeq STARFusion TCGA_RNA-Seq DHX32-FAM160B1 DHX32 chr10 127540862 - FAM160B1 chr10 116590611 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Intra-chr q26.2 q25.3 52918 ChimerSeq STARFusion TCGA_RNA-Seq ECI1-CTBP1 ECI1 chr16 2296860 - CTBP1 chr4 1208261 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 In-Frame Inter-chr p13.3 p16.3 52919 ChimerSeq STARFusion TCGA_RNA-Seq ECI1-GFER ECI1 chr16 2293047 - GFER chr16 2035867 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Intra-chr p13.3 p13.3 52920 ChimerSeq STARFusion TCGA_RNA-Seq EEFSEC-CEP63 EEFSEC chr3 127965886 + CEP63 chr3 134280219 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Intra-chr q21.3 q22.2 52921 ChimerSeq STARFusion TCGA_RNA-Seq EXD3-RASD2 EXD3 chr9 140317566 - RASD2 chr22 35942848 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 5'UTR-5'UTR Inter-chr q34.3 q12.3 52922 ChimerSeq STARFusion TCGA_RNA-Seq FAM120B-NSMCE2 FAM120B chr6 170667406 + NSMCE2 chr8 126194345 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 In-Frame Inter-chr q24.13 52923 ChimerSeq STARFusion TCGA_RNA-Seq FAM120B-TAB2 FAM120B chr6 170667406 + TAB2 chr6 149663821 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 CDS-5'UTR Intra-chr q25.1 52924 ChimerSeq STARFusion TCGA_RNA-Seq FOXN3-LAPTM5 FOXN3 chr14 89952913 - LAPTM5 chr1 31215396 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 5'UTR-CDS Inter-chr q32.11 Transcription factor p35.2 52925 ChimerSeq STARFusion TCGA_RNA-Seq FZR1-SH3YL1 FZR1 chr19 3523056 + SH3YL1 chr2 230044 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene p25.3 52926 ChimerSeq STARFusion TCGA_RNA-Seq GARNL3-ITM2B GARNL3 chr9 130107756 + ITM2B chr13 48827944 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 In-Frame Inter-chr q33.3 q14.2 52927 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2B-ATF7 GATAD2B chr1 153895209 - ATF7 chr12 53946421 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 5'UTR-CDS Inter-chr Transcription factor q13.13 Transcription factor 52928 ChimerSeq STARFusion TCGA_RNA-Seq GPATCH1-NDUFAF4 GPATCH1 chr19 33602808 + NDUFAF4 chr6 97344723 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Inter-chr q13.11 q16.1 52929 ChimerSeq STARFusion TCGA_RNA-Seq GPBP1-MEF2C GPBP1 chr5 56472227 + MEF2C chr5 88119747 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 5'UTR-5'UTR Intra-chr q11.2 Transcription factor q14.3 Transcription factor 52930 ChimerSeq STARFusion TCGA_RNA-Seq HERC4-RAB4A HERC4 chr10 69773783 - RAB4A chr1 229431595 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Inter-chr q21.3 q42.13 52931 ChimerSeq STARFusion TCGA_RNA-Seq IGLL5-CRCP IGLL5 chr22 23230439 + CRCP chr7 65610430 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 In-Frame Inter-chr q11.22 q11.21 Seq+ 52932 ChimerSeq STARFusion TCGA_RNA-Seq IGSF1-CLIC2 IGSF1 chrX 130498723 - CLIC2 chrX 154528458 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 5'UTR-CDS Intra-chr q26.2 q28 52933 ChimerSeq STARFusion TCGA_RNA-Seq IKZF1-COG5 IKZF1 chr7 50367353 + COG5 chr7 106898828 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Intra-chr p12.2 Oncogene Tumor suppressor gene Transcription factor 52934 ChimerSeq STARFusion TCGA_RNA-Seq IP6K2-GNB3 IP6K2 chr3 48732523 - GNB3 chr12 6952941 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Inter-chr p21.31 p13.31 Seq+ 52935 ChimerSeq STARFusion TCGA_RNA-Seq KCTD3-POU2F1 KCTD3 chr1 215768813 + POU2F1 chr1 167301707 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Intra-chr q41 q24.2 Transcription factor 52936 ChimerSeq STARFusion TCGA_RNA-Seq LENG8-RHBDF2 LENG8 chr19 54969700 + RHBDF2 chr17 74483991 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 CDS-5'UTR Inter-chr q25.1 52937 ChimerSeq STARFusion TCGA_RNA-Seq MBOAT2-N4BP2L2 MBOAT2 chr2 9083316 - N4BP2L2 chr13 33101669 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 In-Frame Inter-chr p25.1 q13.1 52938 ChimerSeq STARFusion TCGA_RNA-Seq MBP-RAB12 MBP chr18 74844536 - RAB12 chr18 8624936 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 5'UTR-CDS Intra-chr q23 p11.22 52939 ChimerSeq STARFusion TCGA_RNA-Seq MID1-PRDX4 MID1 chrX 10588330 - PRDX4 chrX 23700513 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 5'UTR-CDS Intra-chr p22.2 p22.11 52940 ChimerSeq STARFusion TCGA_RNA-Seq MLLT3-MBNL1 MLLT3 chr9 20620653 - MBNL1 chr3 152132730 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Inter-chr p21.3 q25.1 52941 ChimerSeq STARFusion TCGA_RNA-Seq MLPH-SHARPIN MLPH chr2 238419744 + SHARPIN chr8 145154972 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 In-Frame Inter-chr q37.3 q24.3 52942 ChimerSeq STARFusion TCGA_RNA-Seq MRPL35-TMEM254 MRPL35 chr2 86437736 + TMEM254 chr10 81850553 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Inter-chr p11.2 q22.3 52943 ChimerSeq STARFusion TCGA_RNA-Seq NARFL-CHADL NARFL chr16 789643 - CHADL chr22 41631347 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Inter-chr p13.3 q13.2 52944 ChimerSeq STARFusion TCGA_RNA-Seq NCOA7-SCYL2 NCOA7 chr6 126136550 + SCYL2 chr12 100676721 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 5'UTR-5'UTR Inter-chr q22.31 q23.1 Other:SCY1 52945 ChimerSeq STARFusion TCGA_RNA-Seq NIPA1-PEAK1 NIPA1 chr15 23086234 - PEAK1 chr15 77657567 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 CDS-5'UTR Intra-chr q11.2 q24.3 52946 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH1-EEF1D NOTCH1 chr9 139438476 - EEF1D chr8 144669022 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 In-Frame Inter-chr q34.3 Oncogene Tumor suppressor gene 52947 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH1-TRAF2 NOTCH1 chr9 139438476 - TRAF2 chr9 139793165 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 CDS-5'UTR Intra-chr q34.3 Oncogene Tumor suppressor gene q34.3 Tumor suppressor gene 52948 ChimerSeq STARFusion TCGA_RNA-Seq NOXO1-TPRN NOXO1 chr16 2030940 - TPRN chr9 140087143 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 In-Frame Inter-chr p13.3 q34.3 52949 ChimerSeq STARFusion TCGA_RNA-Seq NPEPPS-EFCAB13 NPEPPS chr17 45677105 + EFCAB13 chr17 45405635 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Intra-chr q21.32 q21.32 52950 ChimerSeq STARFusion TCGA_RNA-Seq NPEPPS-ITGB3 NPEPPS chr17 45677105 + ITGB3 chr17 45405635 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 CDS-3'UTR Intra-chr q21.32 q21.32 Oncogene Tumor suppressor gene 52951 ChimerSeq STARFusion TCGA_RNA-Seq NPEPPS-ITGB3 NPEPPS chr17 45677105 + ITGB3 chr17 45405635 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 CDS-3'UTR Intra-chr q21.32 q21.32 Oncogene Tumor suppressor gene 52952 ChimerSeq STARFusion TCGA_RNA-Seq PIN4-PRKCE PIN4 chrX 71406384 + PRKCE chr2 45903223 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Inter-chr q13.1 p21 Tumor suppressor gene 52953 ChimerSeq STARFusion TCGA_RNA-Seq PJA2-HIVEP2 PJA2 chr5 108745543 - HIVEP2 chr6 143082702 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 5'UTR-CDS Inter-chr q21.3 q24.2 Transcription factor 52954 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R13B-PTPRA PPP1R13B chr14 104313636 - PTPRA chr20 2985702 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 In-Frame Inter-chr q32.33 p13 52955 ChimerSeq STARFusion TCGA_RNA-Seq PPP3CA-BANK1 PPP3CA chr4 102267896 - BANK1 chr4 102816462 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Intra-chr q24 q24 52956 ChimerSeq STARFusion TCGA_RNA-Seq PRDM16-SKI PRDM16 chr1 2985860 + SKI chr1 2234417 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Intra-chr p36.32 Transcription factor p36.33 Transcription factor 52957 ChimerSeq STARFusion TCGA_RNA-Seq PROX1-SMYD2 PROX1 chr1 214178615 + SMYD2 chr1 214488105 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 In-Frame Intra-chr q32.3 Tumor suppressor gene Transcription factor q32.3 52958 ChimerSeq STARFusion TCGA_RNA-Seq PTDSS1-CPQ PTDSS1 chr8 97285618 + CPQ chr8 98155248 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 In-Frame Intra-chr q22.1 q22.1 52959 ChimerSeq STARFusion TCGA_RNA-Seq PTK6-GID8 PTK6 chr20 62162099 - GID8 chr20 61572843 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Intra-chr q13.33 q13.33 52960 ChimerSeq STARFusion TCGA_RNA-Seq RAMP3-UPP1 RAMP3 chr7 45197485 + UPP1 chr7 48146470 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 In-Frame Intra-chr p13 p12.3 52961 ChimerSeq STARFusion TCGA_RNA-Seq RFTN1-RPL13A RFTN1 chr3 16535232 - RPL13A chr19 49993489 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 In-Frame Inter-chr p24.3 q13.33 52962 ChimerSeq STARFusion TCGA_RNA-Seq RPS8-GALT RPS8 chr1 45242446 + GALT chr9 34650366 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 3'UTR-CDS Inter-chr p34.1 p13.3 52963 ChimerSeq STARFusion TCGA_RNA-Seq SLC17A9-DAZAP1 SLC17A9 chr20 61584241 + DAZAP1 chr19 1417499 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 In-Frame Inter-chr q13.33 p13.3 52964 ChimerSeq STARFusion TCGA_RNA-Seq SLCO4A1-SSNA1 SLCO4A1 chr20 61300430 + SSNA1 chr9 140084259 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 In-Frame Inter-chr q13.33 q34.3 52965 ChimerSeq STARFusion TCGA_RNA-Seq SNHG6-ASH2L SNHG6 chr8 67837672 - ASH2L chr8 37967897 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 3'UTR-CDS Intra-chr q13.1 p11.23 52966 ChimerSeq STARFusion TCGA_RNA-Seq SPICE1-RNF169 SPICE1 chr3 113225354 - RNF169 chr11 74500671 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Inter-chr q13.2 q13.4 52967 ChimerSeq STARFusion TCGA_RNA-Seq SPSB3-CAPN15 SPSB3 chr16 1831359 - CAPN15 chr16 583946 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Intra-chr p13.3 p13.3 52968 ChimerSeq STARFusion TCGA_RNA-Seq SRSF6-NETO2 SRSF6 chr20 42087149 + NETO2 chr16 47143622 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Inter-chr q13.11 q12.1 52969 ChimerSeq STARFusion TCGA_RNA-Seq SSBP2-GUSBP2 SSBP2 chr5 81046800 - GUSBP2 chr6 26853222 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 CDS-3'UTR Inter-chr q14.1 Tumor suppressor gene p22.2 52970 ChimerSeq STARFusion TCGA_RNA-Seq STRAP-ADNP2 STRAP chr12 16043603 + ADNP2 chr18 77905318 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 CDS-3'UTR Inter-chr p12.3 q23 Transcription factor 52971 ChimerSeq STARFusion TCGA_RNA-Seq SUGT1P3-GTF2F2 SUGT1P3 chr13 41482295 - GTF2F2 chr13 45781559 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 3'UTR-CDS Intra-chr q14.11 q14.12 52972 ChimerSeq STARFusion TCGA_RNA-Seq SUN1-PDGFA SUN1 chr7 892304 + PDGFA chr7 557127 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Intra-chr p22.3 p22.3 52973 ChimerSeq STARFusion TCGA_RNA-Seq TRAF5-MTERFD2 TRAF5 chr1 211500231 + MTERFD2 chr2 242015097 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 5'UTR-3'UTR Inter-chr q32.3 52974 ChimerSeq STARFusion TCGA_RNA-Seq TRAM1-CTBP1 TRAM1 chr8 71520312 - CTBP1 chr4 1235307 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 CDS-5'UTR Inter-chr q13.3 p16.3 52975 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN14-GLDN TSPAN14 chr10 82214127 + GLDN chr15 51669646 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 5'UTR-CDS Inter-chr q23.1 q21.2 52976 ChimerSeq STARFusion TCGA_RNA-Seq VAPA-RAB31 VAPA chr18 9914332 + RAB31 chr18 9845579 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Intra-chr p11.22 p11.22 Seq+ 52977 ChimerSeq STARFusion TCGA_RNA-Seq VPS26B-HIPK3 VPS26B chr11 134095239 + HIPK3 chr11 33307959 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 CDS-5'UTR Intra-chr q25 p13 CMGC:DYRK 52978 ChimerSeq STARFusion TCGA_RNA-Seq VTI1A-ACSL5 VTI1A chr10 114298089 + ACSL5 chr10 114154676 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 In-Frame Intra-chr q25.2 q25.2 Seq+ 52979 ChimerSeq STARFusion TCGA_RNA-Seq YBX3-RPS6KA3 YBX3 chr12 10865810 - RPS6KA3 chrX 20252932 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Inter-chr p13.2 Transcription factor p22.12 52980 ChimerSeq STARFusion TCGA_RNA-Seq YIPF4-SFXN5 YIPF4 chr2 32503303 + SFXN5 chr2 73198814 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 In-Frame Intra-chr p22.3 p13.2 52981 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC21-KDM4C ZDHHC21 chr9 14639894 - KDM4C chr9 7011698 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Intra-chr p22.3 p24.1 52982 ChimerSeq STARFusion TCGA_RNA-Seq ZKSCAN1-GATS ZKSCAN1 chr7 99613349 + GATS chr7 99821698 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 5'UTR-CDS Intra-chr q22.1 Transcription factor q22.1 52983 ChimerSeq STARFusion TCGA_RNA-Seq ZKSCAN1-GATS ZKSCAN1 chr7 99613349 + GATS chr7 99821698 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 5'UTR-CDS Intra-chr q22.1 Transcription factor q22.1 52984 ChimerSeq STARFusion TCGA_RNA-Seq ZNF12-RAC1 ZNF12 chr7 6744790 - RAC1 chr7 6439757 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 In-Frame Intra-chr p22.1 Transcription factor p22.1 Oncogene 52985 ChimerSeq STARFusion TCGA_RNA-Seq ZNF148-ENTPD5 ZNF148 chr3 125093946 - ENTPD5 chr14 74477853 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 5'UTR-5'UTR Inter-chr q21.2 Transcription factor q24.3 52986 ChimerSeq STARFusion TCGA_RNA-Seq ZNF77-TSPAN14 ZNF77 chr19 2936522 - TSPAN14 chr10 82228303 + Exonic hg19 STAD TCGA-IN-7808-01A 2 0 CDS-5'UTR Inter-chr p13.3 Transcription factor q23.1 52987 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF2-BCL2A1 ZNRF2 chr7 30325442 + BCL2A1 chr15 80253516 - Exonic hg19 STAD TCGA-IN-7808-01A 2 0 Out-of-frame Inter-chr p14.3 q25.1 52988 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142481912 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-F1-6875-01A 47 0 3'UTR-CDS Inter-chr q13.41 52989 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142471340 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-F1-6875-01A 46 0 3'UTR-CDS Inter-chr q13.41 52990 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142460418 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-F1-6875-01A 46 0 In-Frame Inter-chr q13.41 52991 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3P1-KLK6 PRSS3P1 chr7 142481912 + KLK6 chr19 51462572 - Exonic hg19 STAD TCGA-F1-6875-01A 32 0 Out-of-frame Inter-chr q13.41 Tumor suppressor gene 52992 ChimerSeq STARFusion TCGA_RNA-Seq TNPO2-HOOK2 TNPO2 chr19 12834063 - HOOK2 chr19 12885711 - Exonic hg19 STAD TCGA-F1-6875-01A 11 4 5'UTR-CDS Intra-chr p13.13 p13.13 Seq+ 52993 ChimerSeq STARFusion TCGA_RNA-Seq CAPZA2-MET CAPZA2 chr7 116502704 + MET chr7 116435709 + Exonic hg19 STAD TCGA-HU-8238-01A 41 1 In-Frame Intra-chr q31.2 q31.2 TK:Met Oncogene KB Pub Seq+ 52994 ChimerSeq STARFusion TCGA_RNA-Seq KIF3A-PDLIM4 KIF3A chr5 132073106 - PDLIM4 chr5 131598302 + Exonic hg19 STAD TCGA-HU-8238-01A 22 16 In-Frame Intra-chr q31.1 q31.1 Tumor suppressor gene Seq+ 52995 ChimerSeq STARFusion TCGA_RNA-Seq HNF1B-FHOD3 HNF1B chr17 36059082 - FHOD3 chr18 34310609 + Exonic hg19 STAD TCGA-HU-8238-01A 7 4 In-Frame Inter-chr q12 Transcription factor q12.2 52996 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC9-KCNK9 TRAPPC9 chr8 140898123 - KCNK9 chr8 140631342 - Exonic hg19 STAD TCGA-HU-8238-01A 5 0 In-Frame Intra-chr q24.3 q24.3 52997 ChimerSeq STARFusion TCGA_RNA-Seq OLFM2-INSR OLFM2 chr19 10046980 - INSR chr19 7184648 - Exonic hg19 STAD TCGA-HU-8238-01A 4 1 Out-of-frame Intra-chr p13.2 p13.2 TK:InsR 52998 ChimerSeq STARFusion TCGA_RNA-Seq AK1-FAM102A AK1 chr9 130639902 - FAM102A chr9 130710693 - Exonic hg19 STAD TCGA-HU-8238-01A 3 1 5'UTR-5'UTR Intra-chr q34.11 q34.11 52999 ChimerSeq STARFusion TCGA_RNA-Seq SLC22A4-SEPT8 SLC22A4 chr5 131630702 + SEPT8 chr5 132101221 - Exonic hg19 STAD TCGA-HU-8238-01A 3 1 In-Frame Intra-chr q31.1 q31.1 Seq+ 53000 ChimerSeq STARFusion TCGA_RNA-Seq AMBRA1-REG4 AMBRA1 chr11 46615471 - REG4 chr1 120336878 - Exonic hg19 STAD TCGA-HU-8238-01A 3 0 Out-of-frame Inter-chr p11.2 p12 53001 ChimerSeq STARFusion TCGA_RNA-Seq GABARAPL1-CEACAM6 GABARAPL1 chr12 10374558 + CEACAM6 chr19 42259445 + Exonic hg19 STAD TCGA-HU-8238-01A 3 0 Out-of-frame Inter-chr p13.2 q13.2 53002 ChimerSeq STARFusion TCGA_RNA-Seq GBF1-ZC3H7B GBF1 chr10 104139655 + ZC3H7B chr22 41735091 + Exonic hg19 STAD TCGA-HU-8238-01A 3 0 Out-of-frame Inter-chr q24.32 q13.2 53003 ChimerSeq STARFusion TCGA_RNA-Seq LAT2-CBLC LAT2 chr7 73638408 + CBLC chr19 45284494 + Exonic hg19 STAD TCGA-HU-8238-01A 3 0 Out-of-frame Inter-chr q11.23 Tumor suppressor gene q13.32 53004 ChimerSeq STARFusion TCGA_RNA-Seq MANF-HSPG2 MANF chr3 51422831 + HSPG2 chr1 22199166 - Exonic hg19 STAD TCGA-HU-8238-01A 3 0 Out-of-frame Inter-chr p21.2 p36.12 53005 ChimerSeq STARFusion TCGA_RNA-Seq PERP-TMBIM6 PERP chr6 138413046 - TMBIM6 chr12 50158464 + Exonic hg19 STAD TCGA-HU-8238-01A 3 0 Out-of-frame Inter-chr q23.3 q13.12 53006 ChimerSeq STARFusion TCGA_RNA-Seq PRPF40B-C5orf56 PRPF40B chr12 49962506 + C5orf56 chr5 131811359 + Exonic hg19 STAD TCGA-HU-8238-01A 3 0 5'UTR-5'UTR Inter-chr q13.12 q31.1 53007 ChimerSeq STARFusion TCGA_RNA-Seq PTPN23-UQCC2 PTPN23 chr3 47437707 + UQCC2 chr6 33669197 - Exonic hg19 STAD TCGA-HU-8238-01A 3 0 Out-of-frame Inter-chr p21.31 Tumor suppressor gene p21.31 53008 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC8-TAF3 ZDHHC8 chr22 20135241 + TAF3 chr10 8051194 + Exonic hg19 STAD TCGA-HU-8238-01A 3 0 Out-of-frame Inter-chr q11.21 p14 53009 ChimerSeq STARFusion TCGA_RNA-Seq RER1-MMEL1 RER1 chr1 2332374 + MMEL1 chr1 2524405 - Exonic hg19 STAD TCGA-HU-8238-01A 2 1 Out-of-frame Intra-chr p36.32 53010 ChimerSeq STARFusion TCGA_RNA-Seq ACACA-CYB5A ACACA chr17 35687113 - CYB5A chr18 71930712 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 Out-of-frame Inter-chr q22.3 Tumor suppressor gene Seq+ 53011 ChimerSeq STARFusion TCGA_RNA-Seq ACSL3-FARSB ACSL3 chr2 223752606 + FARSB chr2 223436741 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 5'UTR-CDS Intra-chr q36.1 q36.1 53012 ChimerSeq STARFusion TCGA_RNA-Seq ADAMTS9-VPS8 ADAMTS9 chr3 64666877 - VPS8 chr3 184542333 + Exonic hg19 STAD TCGA-HU-8238-01A 2 0 CDS-5'UTR Intra-chr p14.1 Tumor suppressor gene q27.2 53013 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD44-TXLNG2P ANKRD44 chr2 198175302 - TXLNG2P chrY 21755285 + Exonic hg19 STAD TCGA-HU-8238-01A 2 0 CDS-5'UTR Inter-chr q33.1 53014 ChimerSeq STARFusion TCGA_RNA-Seq ARID4B-AIDA ARID4B chr1 235383108 - AIDA chr1 222876559 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 In-Frame Intra-chr q42.3 q41 53015 ChimerSeq STARFusion TCGA_RNA-Seq ARRDC1-MYBL2 ARRDC1 chr9 140500287 + MYBL2 chr20 42331130 + Exonic hg19 STAD TCGA-HU-8238-01A 2 0 Out-of-frame Inter-chr q34.3 q13.12 Transcription factor 53016 ChimerSeq STARFusion TCGA_RNA-Seq ATP2C2-CTDSPL2 ATP2C2 chr16 84432215 + CTDSPL2 chr15 44776422 + Exonic hg19 STAD TCGA-HU-8238-01A 2 0 In-Frame Inter-chr q24.1 q15.3 53017 ChimerSeq STARFusion TCGA_RNA-Seq BABAM1-RCN3 BABAM1 chr19 17378336 + RCN3 chr19 50031724 + Exonic hg19 STAD TCGA-HU-8238-01A 2 0 5'UTR-5'UTR Intra-chr p13.11 q13.33 53018 ChimerSeq STARFusion TCGA_RNA-Seq BAIAP2L1-MTPN BAIAP2L1 chr7 98030114 - MTPN chr7 135636378 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 In-Frame Intra-chr q22.1 q33 53019 ChimerSeq STARFusion TCGA_RNA-Seq CATSPERB-ATXN10 CATSPERB chr14 92185762 - ATXN10 chr22 46125305 + Exonic hg19 STAD TCGA-HU-8238-01A 2 0 Out-of-frame Inter-chr q13.31 53020 ChimerSeq STARFusion TCGA_RNA-Seq CD3G-PMS1 CD3G chr11 118221398 + PMS1 chr2 190728469 + Exonic hg19 STAD TCGA-HU-8238-01A 2 0 Out-of-frame Inter-chr q23.3 q32.2 Oncogene 53021 ChimerSeq STARFusion TCGA_RNA-Seq CD72-XPO1 CD72 chr9 35646400 - XPO1 chr2 61711240 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 5'UTR-CDS Inter-chr p13.3 p15 Oncogene 53022 ChimerSeq STARFusion TCGA_RNA-Seq CLDN12-PIK3AP1 CLDN12 chr7 90034926 + PIK3AP1 chr10 98355391 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 5'UTR-CDS Inter-chr q21.13 q24.1 53023 ChimerSeq STARFusion TCGA_RNA-Seq CLINT1-MIA3 CLINT1 chr5 157218711 - MIA3 chr1 222837340 + Exonic hg19 STAD TCGA-HU-8238-01A 2 0 In-Frame Inter-chr q33.3 q41 Seq+ 53024 ChimerSeq STARFusion TCGA_RNA-Seq CMC2-AP1G1 CMC2 chr16 81040339 - AP1G1 chr16 71784235 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 5'UTR-5'UTR Intra-chr q23.2 q22.2 53025 ChimerSeq STARFusion TCGA_RNA-Seq CPOX-RPL37 CPOX chr3 98309476 - RPL37 chr5 40828053 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 CDS-3'UTR Inter-chr q11.2 p13.1 53026 ChimerSeq STARFusion TCGA_RNA-Seq CTBP2-CHST15 CTBP2 chr10 126727566 - CHST15 chr10 125806240 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 CDS-5'UTR Intra-chr q26.13 q26.13 53027 ChimerSeq STARFusion TCGA_RNA-Seq DCAF8-COPA DCAF8 chr1 160252207 - COPA chr1 160260006 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 5'UTR-CDS Intra-chr q23.2 q23.2 53028 ChimerSeq STARFusion TCGA_RNA-Seq DDX55-VAC14 DDX55 chr12 124086803 + VAC14 chr16 70778482 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 In-Frame Inter-chr q24.31 q22.2 53029 ChimerSeq STARFusion TCGA_RNA-Seq DICER1-RAB3GAP2 DICER1 chr14 95590533 - RAB3GAP2 chr1 220406205 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 Out-of-frame Inter-chr q32.13 Oncogene Tumor suppressor gene q41 53030 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC25-KIAA0368 DNAJC25 chr9 114394023 + KIAA0368 chr9 114206774 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 In-Frame Intra-chr q31.3 q31.3 53031 ChimerSeq STARFusion TCGA_RNA-Seq EPS8-RASSF3 EPS8 chr12 15942095 - RASSF3 chr12 65078567 + Exonic hg19 STAD TCGA-HU-8238-01A 2 0 5'UTR-5'UTR Intra-chr p12.3 q14.2 Tumor suppressor gene 53032 ChimerSeq STARFusion TCGA_RNA-Seq EVI5-GCLM EVI5 chr1 93070864 - GCLM chr1 94367225 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 In-Frame Intra-chr p22.1 p22.1 53033 ChimerSeq STARFusion TCGA_RNA-Seq EZR-TMEM181 EZR chr6 159239114 - TMEM181 chr6 158994452 + Exonic hg19 STAD TCGA-HU-8238-01A 2 0 Out-of-frame Intra-chr q25.3 q25.3 53034 ChimerSeq STARFusion TCGA_RNA-Seq FLOT2-FAM222B FLOT2 chr17 27224544 - FAM222B chr17 27093725 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 CDS-5'UTR Intra-chr q11.2 q11.2 53035 ChimerSeq STARFusion TCGA_RNA-Seq FOXN3-ZC3H7B FOXN3 chr14 89878278 - ZC3H7B chr22 41716659 + Exonic hg19 STAD TCGA-HU-8238-01A 2 0 CDS-5'UTR Inter-chr q32.11 Transcription factor q13.2 53036 ChimerSeq STARFusion TCGA_RNA-Seq GNAQ-HNRNPK GNAQ chr9 80646016 - HNRNPK chr9 86593367 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 CDS-5'UTR Intra-chr q21.2 Oncogene q21.32 53037 ChimerSeq STARFusion TCGA_RNA-Seq GORASP2-TLK1 GORASP2 chr2 171785913 + TLK1 chr2 171917666 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 In-Frame Intra-chr q31.1 q31.1 Other:TLK 53038 ChimerSeq STARFusion TCGA_RNA-Seq GPCPD1-RNASET2 GPCPD1 chr20 5573973 - RNASET2 chr6 167362113 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 In-Frame Inter-chr p12.3 q27 Tumor suppressor gene 53039 ChimerSeq STARFusion TCGA_RNA-Seq GRB10-GPBP1 GRB10 chr7 50685768 - GPBP1 chr5 56526673 + Exonic hg19 STAD TCGA-HU-8238-01A 2 0 In-Frame Inter-chr p12.1 q11.2 Transcription factor 53040 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPA3-ANKHD1 HNRNPA3 chr2 178080916 + ANKHD1 chr5 139864706 + Exonic hg19 STAD TCGA-HU-8238-01A 2 0 In-Frame Inter-chr q31.2 q31.3 53041 ChimerSeq STARFusion TCGA_RNA-Seq IGLL5-WIPF2 IGLL5 chr22 23230439 + WIPF2 chr17 38430042 + Exonic hg19 STAD TCGA-HU-8238-01A 2 0 In-Frame Inter-chr q11.22 q21.2 Seq+ 53042 ChimerSeq STARFusion TCGA_RNA-Seq IKZF5-HNRNPA2B1 IKZF5 chr10 124768210 - HNRNPA2B1 chr7 26237352 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 5'UTR-CDS Inter-chr q26.13 Transcription factor p15.2 Seq+ 53043 ChimerSeq STARFusion TCGA_RNA-Seq IP6K2-SATB2 IP6K2 chr3 48732523 - SATB2 chr2 200320819 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 CDS-5'UTR Inter-chr p21.31 q33.1 Transcription factor 53044 ChimerSeq STARFusion TCGA_RNA-Seq KALRN-SDCCAG8 KALRN chr3 124303753 + SDCCAG8 chr1 243493842 + Exonic hg19 STAD TCGA-HU-8238-01A 2 0 Out-of-frame Inter-chr q21.1 53045 ChimerSeq STARFusion TCGA_RNA-Seq KCNK1-UCHL5 KCNK1 chr1 233750272 + UCHL5 chr1 193020947 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 In-Frame Intra-chr q42.2 q31.2 53046 ChimerSeq STARFusion TCGA_RNA-Seq M6PR-HP1BP3 M6PR chr12 9096001 - HP1BP3 chr1 21100103 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 In-Frame Inter-chr p13.31 p36.12 53047 ChimerSeq STARFusion TCGA_RNA-Seq MAT2B-LARS MAT2B chr5 162932755 + LARS chr5 145557228 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 In-Frame Intra-chr q34 q32 53048 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-AK3 MATR3 chr5 138614097 + AK3 chr9 4722625 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 5'UTR-5'UTR Inter-chr q31.2 p24.1 53049 ChimerSeq STARFusion TCGA_RNA-Seq NSUN7-RBM47 NSUN7 chr4 40763318 + RBM47 chr4 40440941 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 CDS-5'UTR Intra-chr p14 p14 53050 ChimerSeq STARFusion TCGA_RNA-Seq PARD3B-ALS2 PARD3B chr2 205410842 + ALS2 chr2 202633668 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 CDS-5'UTR Intra-chr q33.3 q33.1 53051 ChimerSeq STARFusion TCGA_RNA-Seq PARL-IP6K2 PARL chr3 183602510 - IP6K2 chr3 48732854 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 In-Frame Intra-chr q27.1 p21.31 53052 ChimerSeq STARFusion TCGA_RNA-Seq PEX19-COPA PEX19 chr1 160252207 - COPA chr1 160260006 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 In-Frame Intra-chr q23.2 q23.2 53053 ChimerSeq STARFusion TCGA_RNA-Seq PLCH1-PLSCR1 PLCH1 chr3 155421935 - PLSCR1 chr3 146254352 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 5'UTR-5'UTR Intra-chr q25.31 q24 Transcription factor 53054 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHS1-ARF4 PLEKHS1 chr10 115515064 + ARF4 chr3 57570191 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 Out-of-frame Inter-chr q25.3 p14.3 53055 ChimerSeq STARFusion TCGA_RNA-Seq POLR3E-GNAS POLR3E chr16 22320831 + GNAS chr20 57470667 + Exonic hg19 STAD TCGA-HU-8238-01A 2 0 In-Frame Inter-chr q13.32 Oncogene 53056 ChimerSeq STARFusion TCGA_RNA-Seq PXMP2-GALNT3 PXMP2 chr12 133266962 + GALNT3 chr2 166621566 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 In-Frame Inter-chr q24.33 q24.3 53057 ChimerSeq STARFusion TCGA_RNA-Seq R3HDM2-TFG R3HDM2 chr12 57789532 - TFG chr3 100463677 + Exonic hg19 STAD TCGA-HU-8238-01A 2 0 5'UTR-CDS Inter-chr q13.3 q12.2 53058 ChimerSeq STARFusion TCGA_RNA-Seq RGL1-COLGALT2 RGL1 chr1 183816908 + COLGALT2 chr1 183947654 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 Out-of-frame Intra-chr q25.3 q25.3 53059 ChimerSeq STARFusion TCGA_RNA-Seq RND3-B2M RND3 chr2 151343208 - B2M chr15 45007621 + Exonic hg19 STAD TCGA-HU-8238-01A 2 0 In-Frame Inter-chr q23.3 Tumor suppressor gene Oncogene 53060 ChimerSeq STARFusion TCGA_RNA-Seq RNF213-TMEM45B RNF213 chr17 78237577 + TMEM45B chr11 129728469 + Exonic hg19 STAD TCGA-HU-8238-01A 2 0 Out-of-frame Inter-chr q25.3 Oncogene q24.3 Seq+ 53061 ChimerSeq STARFusion TCGA_RNA-Seq RPF2-GTF3C6 RPF2 chr6 111303332 + GTF3C6 chr6 111288713 + Exonic hg19 STAD TCGA-HU-8238-01A 2 0 Out-of-frame Intra-chr q21 q21 Seq+ 53062 ChimerSeq STARFusion TCGA_RNA-Seq SAR1A-FAM156A SAR1A chr10 71930169 - FAM156A chrX 52985544 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 5'UTR-5'UTR Inter-chr q22.1 p11.22 Seq+ 53063 ChimerSeq STARFusion TCGA_RNA-Seq SLC35E3-NUP107 SLC35E3 chr12 69140559 + NUP107 chr12 69109407 + Exonic hg19 STAD TCGA-HU-8238-01A 2 0 In-Frame Intra-chr q15 q15 53064 ChimerSeq STARFusion TCGA_RNA-Seq SOS1-MAP4K3 SOS1 chr2 39347477 - MAP4K3 chr2 39542529 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 In-Frame Intra-chr p22.1 p22.1 Seq+ 53065 ChimerSeq STARFusion TCGA_RNA-Seq SRPK1-MRPS16 SRPK1 chr6 35810312 - MRPS16 chr10 75009076 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 3'UTR-3'UTR Inter-chr p21.31 CMGC:SRPK q22.2 53066 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D14-MAD1L1 TBC1D14 chr4 6969151 + MAD1L1 chr7 1938026 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 Out-of-frame Inter-chr p16.1 p22.3 Tumor suppressor gene 53067 ChimerSeq STARFusion TCGA_RNA-Seq TMEM223-NXF1 TMEM223 chr11 62559151 - NXF1 chr11 62560173 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 Out-of-frame Intra-chr q12.3 q12.3 53068 ChimerSeq STARFusion TCGA_RNA-Seq TOLLIP-NOC4L TOLLIP chr11 1307232 - NOC4L chr12 132635526 + Exonic hg19 STAD TCGA-HU-8238-01A 2 0 In-Frame Inter-chr p15.5 q24.33 53069 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN12-GPBP1L1 TSPAN12 chr7 120496752 - GPBP1L1 chr1 46108171 - Exonic hg19 STAD TCGA-HU-8238-01A 2 0 In-Frame Inter-chr q31.31 p34.1 Transcription factor 53070 ChimerSeq STARFusion TCGA_RNA-Seq UBAP2-PRSS3 UBAP2 chr9 34048823 - PRSS3 chr9 33796641 + Exonic hg19 STAD TCGA-HU-8238-01A 2 0 5'UTR-CDS Intra-chr p13.3 p13.3 53071 ChimerSeq STARFusion TCGA_RNA-Seq WWP1-ITGB4 WWP1 chr8 87414432 + ITGB4 chr17 73750657 + Exonic hg19 STAD TCGA-HU-8238-01A 2 0 In-Frame Inter-chr q21.3 q25.1 53072 ChimerSeq STARFusion TCGA_RNA-Seq ZNF302-ITGA3 ZNF302 chr19 35168738 + ITGA3 chr17 48165108 + Exonic hg19 STAD TCGA-HU-8238-01A 2 0 5'UTR-CDS Inter-chr q13.11 Transcription factor q21.33 53073 ChimerSeq STARFusion TCGA_RNA-Seq CLDN18-LYZ CLDN18 chr3 137750984 + LYZ chr12 69747551 + Exonic hg19 STAD TCGA-HU-A4G9-01A 12 8 Out-of-frame Inter-chr q22.3 q15 53074 ChimerSeq STARFusion TCGA_RNA-Seq CLDN18-ARHGAP6 CLDN18 chr3 137749947 + ARHGAP6 chrX 11272827 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 36 9 In-Frame Inter-chr q22.3 p22.2 Seq+ 53075 ChimerSeq STARFusion TCGA_RNA-Seq ATR-U2SURP ATR chr3 142284963 - U2SURP chr3 142751626 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 3 0 3'UTR-CDS Intra-chr q23 Atypical:PIKK Oncogene Tumor suppressor gene q23 Seq+ 53076 ChimerSeq STARFusion TCGA_RNA-Seq CASKIN2-SLC25A36 CASKIN2 chr17 73510118 - SLC25A36 chr3 140695408 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 3 0 Out-of-frame Inter-chr q25.1 q23 53077 ChimerSeq STARFusion TCGA_RNA-Seq CDH3-S100A6 CDH3 chr16 68732577 + S100A6 chr1 153508465 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 3 0 Out-of-frame Inter-chr q22.1 q21.3 53078 ChimerSeq STARFusion TCGA_RNA-Seq ICAM3-MYL6 ICAM3 chr19 10444559 - MYL6 chr12 56552154 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 3 0 Out-of-frame Inter-chr p13.2 q13.2 53079 ChimerSeq STARFusion TCGA_RNA-Seq ICAM3-MYL6B ICAM3 chr19 10444559 - MYL6B chr12 56552154 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 3 0 Out-of-frame Inter-chr p13.2 q13.2 53080 ChimerSeq STARFusion TCGA_RNA-Seq MUC5AC-DPCR1 MUC5AC chr11 1221963 + DPCR1 chr6 30918141 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 3 0 Out-of-frame Inter-chr 53081 ChimerSeq STARFusion TCGA_RNA-Seq NRP2-FCHSD2 NRP2 chr2 206547368 + FCHSD2 chr11 72696160 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 3 0 Out-of-frame Inter-chr q33.3 q13.4 53082 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R5E-PAPD7 PPP2R5E chr14 63920407 - PAPD7 chr5 6737623 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 3 0 CDS-5'UTR Inter-chr q23.2 p15.31 53083 ChimerSeq STARFusion TCGA_RNA-Seq PTMA-ARL6IP4 PTMA chr2 232576695 + ARL6IP4 chr12 123466279 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 3 0 Out-of-frame Inter-chr q37.1 q24.31 53084 ChimerSeq STARFusion TCGA_RNA-Seq SMAD1-PPA2 SMAD1 chr4 146403190 + PPA2 chr4 106374799 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 3 0 5'UTR-CDS Intra-chr q31.21 Transcription factor q24 53085 ChimerSeq STARFusion TCGA_RNA-Seq UBR4-MUC1 UBR4 chr1 19447678 - MUC1 chr1 155162700 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 3 0 Out-of-frame Intra-chr p36.13 q22 Oncogene 53086 ChimerSeq STARFusion TCGA_RNA-Seq ABCA5-SEPT9 ABCA5 chr17 67323193 - SEPT9 chr17 75398141 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 5'UTR-5'UTR Intra-chr q24.3 53087 ChimerSeq STARFusion TCGA_RNA-Seq ACSL5-PPP1R13B ACSL5 chr10 114186117 + PPP1R13B chr14 104212890 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 In-Frame Inter-chr q25.2 q32.33 53088 ChimerSeq STARFusion TCGA_RNA-Seq ACVRL1-SLC43A2 ACVRL1 chr12 52312899 + SLC43A2 chr17 1481617 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 In-Frame Inter-chr q13.13 Oncogene 53089 ChimerSeq STARFusion TCGA_RNA-Seq ANXA11-CCNL2 ANXA11 chr10 81932563 - CCNL2 chr1 1326245 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Inter-chr q22.3 p36.33 53090 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP1-MYL6 ARHGAP1 chr11 46700915 - MYL6 chr12 56553371 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Inter-chr p11.2 q13.2 Seq+ 53091 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP1-MYL6B ARHGAP1 chr11 46700915 - MYL6B chr12 56553371 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 CDS-3'UTR Inter-chr p11.2 q13.2 53092 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF7-CCR6 ARHGEF7 chr13 111806338 + CCR6 chr6 167549526 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 5'UTR-5'UTR Inter-chr q34 q27 53093 ChimerSeq STARFusion TCGA_RNA-Seq ARL6IP6-UBE2E3 ARL6IP6 chr2 153577100 + UBE2E3 chr2 181922420 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Intra-chr q23.3 q31.3 53094 ChimerSeq STARFusion TCGA_RNA-Seq ARRDC2-SEPT9 ARRDC2 chr19 18112382 + SEPT9 chr17 75483506 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 In-Frame Inter-chr p13.11 53095 ChimerSeq STARFusion TCGA_RNA-Seq ASCC3-GPBP1L1 ASCC3 chr6 101311940 - GPBP1L1 chr1 46106075 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 In-Frame Inter-chr q16.3 p34.1 Transcription factor 53096 ChimerSeq STARFusion TCGA_RNA-Seq ATP10D-GSTO1 ATP10D chr4 47556931 + GSTO1 chr10 106027010 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Inter-chr p12 q25.1 53097 ChimerSeq STARFusion TCGA_RNA-Seq AUTS2-PRKRIP1 AUTS2 chr7 69064948 + PRKRIP1 chr7 102065461 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Intra-chr q11.22 q22.1 53098 ChimerSeq STARFusion TCGA_RNA-Seq CASD1-CHMP1A CASD1 chr7 94183887 + CHMP1A chr16 89713739 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 In-Frame Inter-chr q21.3 q24.3 53099 ChimerSeq STARFusion TCGA_RNA-Seq CD22-PACS1 CD22 chr19 35820133 + PACS1 chr11 66006275 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 5'UTR-CDS Inter-chr q13.12 q13.1 53100 ChimerSeq STARFusion TCGA_RNA-Seq CDH10-BASP1 CDH10 chr5 24644703 - BASP1 chr5 17275317 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 5'UTR-5'UTR Intra-chr p14.1 p15.1 Tumor suppressor gene 53101 ChimerSeq STARFusion TCGA_RNA-Seq CHCHD3-DDHD2 CHCHD3 chr7 132754902 - DDHD2 chr8 38103751 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 In-Frame Inter-chr q33 Transcription factor p11.23 53102 ChimerSeq STARFusion TCGA_RNA-Seq CHD1-ZNF638 CHD1 chr5 98262038 - ZNF638 chr2 71607352 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Inter-chr q21.1 Tumor suppressor gene p13.3 53103 ChimerSeq STARFusion TCGA_RNA-Seq CIRBP-ZC3HAV1 CIRBP chr19 1272050 + ZC3HAV1 chr7 138774505 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Inter-chr p13.3 q34 53104 ChimerSeq STARFusion TCGA_RNA-Seq CPS1-NDUFS1 CPS1 chr2 211477017 + NDUFS1 chr2 206989000 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Intra-chr q34 53105 ChimerSeq STARFusion TCGA_RNA-Seq DENND1B-CD55 DENND1B chr1 197741998 - CD55 chr1 207532891 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 In-Frame Intra-chr q31.3 q32.2 53106 ChimerSeq STARFusion TCGA_RNA-Seq DENND1B-OPA1 DENND1B chr1 197684161 - OPA1 chr3 193409852 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Inter-chr q31.3 q29 53107 ChimerSeq STARFusion TCGA_RNA-Seq DSTN-ITPR3 DSTN chr20 17550856 + ITPR3 chr6 33638942 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 In-Frame Inter-chr p12.1 p21.31 53108 ChimerSeq STARFusion TCGA_RNA-Seq EYA3-ANKRD13C EYA3 chr1 28304885 - ANKRD13C chr1 70781249 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Intra-chr p35.3 p31.1 53109 ChimerSeq STARFusion TCGA_RNA-Seq F2RL1-CYSTM1 F2RL1 chr5 76115089 + CYSTM1 chr5 139622890 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 In-Frame Intra-chr q13.3 q31.3 53110 ChimerSeq STARFusion TCGA_RNA-Seq GALNT4-NFYB GALNT4 chr12 89918897 - NFYB chr12 104529310 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 5'UTR-5'UTR Intra-chr q21.33 q23.3 Transcription factor 53111 ChimerSeq STARFusion TCGA_RNA-Seq GATC-GCN1L1 GATC chr12 120884632 + GCN1L1 chr12 120565778 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Intra-chr q24.31 53112 ChimerSeq STARFusion TCGA_RNA-Seq GCA-PAPD7 GCA chr2 163200785 + PAPD7 chr5 6737623 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 CDS-5'UTR Inter-chr q24.2 p15.31 53113 ChimerSeq STARFusion TCGA_RNA-Seq GLRX3-RPP30 GLRX3 chr10 131943583 + RPP30 chr10 92638820 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 In-Frame Intra-chr q26.3 q23.31 53114 ChimerSeq STARFusion TCGA_RNA-Seq GOLIM4-SAMD9 GOLIM4 chr3 167812887 - SAMD9 chr7 92735418 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 CDS-5'UTR Inter-chr q26.2 q21.2 Oncogene 53115 ChimerSeq STARFusion TCGA_RNA-Seq HSPH1-BUB3 HSPH1 chr13 31728770 - BUB3 chr10 124924563 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Inter-chr q12.3 q26.13 53116 ChimerSeq STARFusion TCGA_RNA-Seq ICK-EXOC2 ICK chr6 52926394 - EXOC2 chr6 637861 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 5'UTR-5'UTR Intra-chr p12.1 CMGC:RCK Oncogene p25.3 53117 ChimerSeq STARFusion TCGA_RNA-Seq KLRD1-GNPTAB KLRD1 chr12 10467372 + GNPTAB chr12 102174399 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 In-Frame Intra-chr p13.2 q23.2 53118 ChimerSeq STARFusion TCGA_RNA-Seq KTN1-PELI2 KTN1 chr14 56146403 + PELI2 chr14 56763318 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Intra-chr q22.3 q22.3 53119 ChimerSeq STARFusion TCGA_RNA-Seq LCOR-PACSIN2 LCOR chr10 98667504 + PACSIN2 chr22 43308163 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 5'UTR-5'UTR Inter-chr q24.1 Transcription factor q13.2 53120 ChimerSeq STARFusion TCGA_RNA-Seq LGALS4-FAM120A LGALS4 chr19 39294162 - FAM120A chr9 96324490 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Inter-chr q22.31 53121 ChimerSeq STARFusion TCGA_RNA-Seq MAGED1-STXBP3 MAGED1 chrX 51546213 + STXBP3 chr1 109301132 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 5'UTR-CDS Inter-chr p11.22 p13.3 53122 ChimerSeq STARFusion TCGA_RNA-Seq METAP2-RPLP0 METAP2 chr12 95877056 + RPLP0 chr12 120635265 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Intra-chr q22 q24.23 53123 ChimerSeq STARFusion TCGA_RNA-Seq METTL9-GSPT1 METTL9 chr16 21636436 + GSPT1 chr16 11991892 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 In-Frame Intra-chr p13.13 53124 ChimerSeq STARFusion TCGA_RNA-Seq MORC3-ZFAS1 MORC3 chr21 37692601 + ZFAS1 chr20 47905582 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Inter-chr q22.12 q13.13 Tumor suppressor gene 53125 ChimerSeq STARFusion TCGA_RNA-Seq MRAS-XKR6 MRAS chr3 138091918 + XKR6 chr8 10971602 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Inter-chr q22.3 p23.1 53126 ChimerSeq STARFusion TCGA_RNA-Seq MYO6-SNX9 MYO6 chr6 76602407 + SNX9 chr6 158296083 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Intra-chr q14.1 q25.3 53127 ChimerSeq STARFusion TCGA_RNA-Seq MYO7B-UBXN4 MYO7B chr2 128354131 + UBXN4 chr2 136527339 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 In-Frame Intra-chr q14.3 q21.3 53128 ChimerSeq STARFusion TCGA_RNA-Seq NPLOC4-SGPL1 NPLOC4 chr17 79577236 - SGPL1 chr10 72630805 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 In-Frame Inter-chr q25.3 q22.1 53129 ChimerSeq STARFusion TCGA_RNA-Seq NRP1-ABI1 NRP1 chr10 33542956 - ABI1 chr10 27066170 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 In-Frame Intra-chr p11.22 p12.1 53130 ChimerSeq STARFusion TCGA_RNA-Seq PDGFC-BTBD3 PDGFC chr4 157891938 - BTBD3 chr20 11898982 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 CDS-5'UTR Inter-chr q32.1 p12.2 53131 ChimerSeq STARFusion TCGA_RNA-Seq PEX10-FAM210A PEX10 chr1 2343830 - FAM210A chr18 13666712 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Inter-chr p36.32 p11.21 53132 ChimerSeq STARFusion TCGA_RNA-Seq PHLDB1-NR4A1 PHLDB1 chr11 118486926 + NR4A1 chr12 52448111 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 In-Frame Inter-chr q23.3 q13.13 Tumor suppressor gene Transcription factor 53133 ChimerSeq STARFusion TCGA_RNA-Seq PICALM-CTSC PICALM chr11 85779693 - CTSC chr11 88045722 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Intra-chr q14.2 q14.2 53134 ChimerSeq STARFusion TCGA_RNA-Seq PIGU-POFUT2 PIGU chr20 33264760 - POFUT2 chr21 46685550 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Inter-chr q11.22 q22.3 53135 ChimerSeq STARFusion TCGA_RNA-Seq PLBD1-SOCS6 PLBD1 chr12 14688593 - SOCS6 chr18 67991779 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 CDS-5'UTR Inter-chr p13.1 q22.2 53136 ChimerSeq STARFusion TCGA_RNA-Seq POC1B-NFYB POC1B chr12 89918897 - NFYB chr12 104529310 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 5'UTR-5'UTR Intra-chr q21.33 q23.3 Transcription factor 53137 ChimerSeq STARFusion TCGA_RNA-Seq POP1-RPL30 POP1 chr8 99146264 + RPL30 chr8 99055003 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Intra-chr q22.2 q22.2 53138 ChimerSeq STARFusion TCGA_RNA-Seq PPP3CA-CAMK2D PPP3CA chr4 102117073 - CAMK2D chr4 114582928 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 In-Frame Intra-chr q24 q26 53139 ChimerSeq STARFusion TCGA_RNA-Seq PPP4R1-INTS9 PPP4R1 chr18 9595016 - INTS9 chr8 28669978 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Inter-chr p11.22 p21.1 53140 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-CPT1A PPP6R3 chr11 68228295 + CPT1A chr11 68580044 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 5'UTR-CDS Intra-chr q13.2 q13.3 53141 ChimerSeq STARFusion TCGA_RNA-Seq PRKAR1A-NDFIP2 PRKAR1A chr17 66511717 + NDFIP2 chr13 80094945 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 In-Frame Inter-chr q24.2 Oncogene Tumor suppressor gene q31.1 53142 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-UTRN PTPRK chr6 128643184 - UTRN chr6 144743014 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 In-Frame Intra-chr Tumor suppressor gene q24.2 53143 ChimerSeq STARFusion TCGA_RNA-Seq RCC1-RPL7A RCC1 chr1 28834672 + RPL7A chr9 136217452 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 5'UTR-CDS Inter-chr p35.3 53144 ChimerSeq STARFusion TCGA_RNA-Seq SCMH1-PIGK SCMH1 chr1 41707731 - PIGK chr1 77588044 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 5'UTR-CDS Intra-chr p34.2 Transcription factor p31.1 53145 ChimerSeq STARFusion TCGA_RNA-Seq SHOC2-DUSP5 SHOC2 chr10 112679415 + DUSP5 chr10 112262479 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 5'UTR-CDS Intra-chr q25.2 q25.2 Tumor suppressor gene Seq+ 53146 ChimerSeq STARFusion TCGA_RNA-Seq SLIT3-TBCA SLIT3 chr5 168620483 - TBCA chr5 77004172 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 In-Frame Intra-chr q35.1 q14.1 53147 ChimerSeq STARFusion TCGA_RNA-Seq SMG7-SEC23IP SMG7 chr1 183441784 + SEC23IP chr10 121657939 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Inter-chr q25.3 q26.11 53148 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-RPL7A SNHG3 chr1 28834672 + RPL7A chr9 136217452 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 5'UTR-CDS Inter-chr p35.3 53149 ChimerSeq STARFusion TCGA_RNA-Seq SULT1C2-CLASP2 SULT1C2 chr2 108910810 + CLASP2 chr3 33543260 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Inter-chr q12.3 p22.3 53150 ChimerSeq STARFusion TCGA_RNA-Seq TIMM23-PARG TIMM23 chr10 51623109 - PARG chr10 51093341 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Intra-chr q11.22 q11.23 53151 ChimerSeq STARFusion TCGA_RNA-Seq TMEM185A-IL13RA1 TMEM185A chrX 148690314 - IL13RA1 chrX 117892018 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Intra-chr q28 q24 53152 ChimerSeq STARFusion TCGA_RNA-Seq TMEM254-SELO TMEM254 chr10 81841960 + SELO chr22 50646965 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Inter-chr q22.3 53153 ChimerSeq STARFusion TCGA_RNA-Seq TRAF3-ZNF787 TRAF3 chr14 103369766 + ZNF787 chr19 56600461 - Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 In-Frame Inter-chr q32.32 q13.43 Transcription factor 53154 ChimerSeq STARFusion TCGA_RNA-Seq UBE2E2-RNF13 UBE2E2 chr3 23258803 + RNF13 chr3 149677843 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 Out-of-frame Intra-chr p24.3 q25.1 53155 ChimerSeq STARFusion TCGA_RNA-Seq WIPF1-RAB10 WIPF1 chr2 175499246 - RAB10 chr2 26321531 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 5'UTR-CDS Intra-chr q31.1 p23.3 53156 ChimerSeq STARFusion TCGA_RNA-Seq ZC3HAV1-NRF1 ZC3HAV1 chr7 138774370 - NRF1 chr7 129297186 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 CDS-5'UTR Intra-chr q34 q32.2 Tumor suppressor gene Transcription factor 53157 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND6-APLP2 ZFAND6 chr15 80352151 + APLP2 chr11 129979324 + Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 5'UTR-5'UTR Inter-chr q25.1 q24.3 53158 ChimerSeq STARFusion TCGA_RNA-Seq RPS29-PIGF RPS29 chr14 50052668 - PIGF chr2 46808730 - Exonic hg19 STAD TCGA-HF-7131-01A 348 11 In-Frame Inter-chr q21.3 p21 Seq+ 53159 ChimerSeq STARFusion TCGA_RNA-Seq CNOT1-SLC38A7 CNOT1 chr16 58620441 - SLC38A7 chr16 58709997 - Exonic hg19 STAD TCGA-HF-7131-01A 94 7 Out-of-frame Intra-chr q21 q21 Seq+ 53160 ChimerSeq STARFusion TCGA_RNA-Seq RASA2-ZBTB38 RASA2 chr3 141248644 + ZBTB38 chr3 141161231 + Exonic hg19 STAD TCGA-HF-7131-01A 46 3 CDS-5'UTR Intra-chr q23 q23 Transcription factor Seq+ 53161 ChimerSeq STARFusion TCGA_RNA-Seq STRIP1-AHCYL1 STRIP1 chr1 110583325 + AHCYL1 chr1 110555009 + Exonic hg19 STAD TCGA-HF-7131-01A 43 1 Out-of-frame Intra-chr p13.3 p13.3 Tumor suppressor gene Seq+ 53162 ChimerSeq STARFusion TCGA_RNA-Seq CNOT1-SLC38A7 CNOT1 chr16 58620449 - SLC38A7 chr16 58709926 - Exonic hg19 STAD TCGA-HF-7131-01A 32 7 Out-of-frame Intra-chr q21 q21 Seq+ 53163 ChimerSeq STARFusion TCGA_RNA-Seq PRELID2-GRXCR2 PRELID2 chr5 145202640 - GRXCR2 chr5 145246291 - Exonic hg19 STAD TCGA-HF-7131-01A 27 3 Out-of-frame Intra-chr q32 q32 53164 ChimerSeq STARFusion TCGA_RNA-Seq RNF128-CXorf57 RNF128 chrX 105970627 + CXorf57 chrX 105905245 + Exonic hg19 STAD TCGA-HF-7131-01A 25 0 In-Frame Intra-chr q22.3 q22.3 Seq+ 53165 ChimerSeq STARFusion TCGA_RNA-Seq USP3-MYO1D USP3 chr15 63829355 + MYO1D chr17 30821933 - Exonic hg19 STAD TCGA-HF-7131-01A 23 5 In-Frame Inter-chr q22.31 q11.2 Seq+ 53166 ChimerSeq STARFusion TCGA_RNA-Seq PXMP2-GOLGA3 PXMP2 chr12 133272632 + GOLGA3 chr12 133363373 - Exonic hg19 STAD TCGA-HF-7131-01A 23 2 In-Frame Intra-chr q24.33 q24.33 Seq+ 53167 ChimerSeq STARFusion TCGA_RNA-Seq UBE2J2-CPSF3L UBE2J2 chr1 1199939 - CPSF3L chr1 1248961 - Exonic hg19 STAD TCGA-HF-7131-01A 17 3 Out-of-frame Intra-chr p36.33 53168 ChimerSeq STARFusion TCGA_RNA-Seq LSM14A-KIAA0355 LSM14A chr19 34663668 + KIAA0355 chr19 34830772 + Exonic hg19 STAD TCGA-HF-7131-01A 12 0 Out-of-frame Intra-chr 53169 ChimerSeq STARFusion TCGA_RNA-Seq STRIP1-AHCYL1 STRIP1 chr1 110582137 + AHCYL1 chr1 110555009 + Exonic hg19 STAD TCGA-HF-7131-01A 10 1 Out-of-frame Intra-chr p13.3 p13.3 Tumor suppressor gene Seq+ 53170 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-SORCS3 IGL@ chr22 23135475 + SORCS3 chr10 106737164 + Exonic hg19 STAD TCGA-HF-7131-01A 10 0 Out-of-frame Inter-chr q11.22 q25.1 53171 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142481912 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-HF-7131-01A 9 0 3'UTR-CDS Inter-chr q13.41 53172 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK5 PRSS1 chr7 142460418 + KLK5 chr19 51447042 - Exonic hg19 STAD TCGA-HF-7131-01A 9 0 In-Frame Inter-chr q13.41 53173 ChimerSeq STARFusion TCGA_RNA-Seq STRIP1-AHCYL1 STRIP1 chr1 110581928 + AHCYL1 chr1 110554984 + Exonic hg19 STAD TCGA-HF-7131-01A 8 1 Out-of-frame Intra-chr p13.3 p13.3 Tumor suppressor gene Seq+ 53174 ChimerSeq STARFusion TCGA_RNA-Seq SLC12A2-PPP2CA SLC12A2 chr5 127420402 + PPP2CA chr5 133537712 - Exonic hg19 STAD TCGA-HU-A4GH-01A 209 28 In-Frame Intra-chr q23.3 q31.1 Tumor suppressor gene Seq+ 53175 ChimerSeq STARFusion TCGA_RNA-Seq FAM120A-WNK2 FAM120A chr9 96261168 + WNK2 chr9 96030909 + Exonic hg19 STAD TCGA-HU-A4GH-01A 92 13 In-Frame Intra-chr q22.31 q22.31 Tumor suppressor gene Seq+ 53176 ChimerSeq STARFusion TCGA_RNA-Seq BRD4-ZC3H15 BRD4 chr19 15443101 - ZC3H15 chr2 187367223 + Exonic hg19 STAD TCGA-HU-A4GH-01A 88 22 5'UTR-CDS Inter-chr p13.12 Atypical:BRD q32.1 Seq+ 53177 ChimerSeq STARFusion TCGA_RNA-Seq ARID1A-RPS6KA1 ARID1A chr1 27102198 + RPS6KA1 chr1 26897940 + Exonic hg19 STAD TCGA-HU-A4GH-01A 83 28 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene Seq+ 53178 ChimerSeq STARFusion TCGA_RNA-Seq HIF1A-PRKCH HIF1A chr14 62162557 + PRKCH chr14 61857943 + Exonic hg19 STAD TCGA-HU-A4GH-01A 59 9 Out-of-frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 Seq+ 53179 ChimerSeq STARFusion TCGA_RNA-Seq ABCC3-XYLT2 ABCC3 chr17 48755580 + XYLT2 chr17 48435568 + Exonic hg19 STAD TCGA-HU-A4GH-01A 49 10 In-Frame Intra-chr q21.33 q21.33 Seq+ 53180 ChimerSeq STARFusion TCGA_RNA-Seq DUS1L-ASPSCR1 DUS1L chr17 80021344 - ASPSCR1 chr17 79943383 + Exonic hg19 STAD TCGA-HU-A4GH-01A 39 17 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 53181 ChimerSeq STARFusion TCGA_RNA-Seq BRD4-ZC3H15 BRD4 chr19 15442647 - ZC3H15 chr2 187367223 + Exonic hg19 STAD TCGA-HU-A4GH-01A 33 22 5'UTR-CDS Inter-chr p13.12 Atypical:BRD q32.1 Seq+ 53182 ChimerSeq STARFusion TCGA_RNA-Seq SETD5-SRGAP3 SETD5 chr3 9470693 + SRGAP3 chr3 9106265 - Exonic hg19 STAD TCGA-HU-A4GH-01A 36 10 Out-of-frame Intra-chr p25.3 p25.3 Tumor suppressor gene Seq+ 53183 ChimerSeq STARFusion TCGA_RNA-Seq LRP5-CHRM1 LRP5 chr11 68181480 + CHRM1 chr11 62678650 - Exonic hg19 STAD TCGA-HU-A4GH-01A 32 13 CDS-5'UTR Intra-chr q13.2 q12.3 Seq+ 53184 ChimerSeq STARFusion TCGA_RNA-Seq ATP2B4-CCNI ATP2B4 chr1 203596347 + CCNI chr4 77987558 - Exonic hg19 STAD TCGA-HU-A4GH-01A 33 6 5'UTR-5'UTR Inter-chr q32.1 q21.1 Seq+ 53185 ChimerSeq STARFusion TCGA_RNA-Seq CTNNBIP1-CLSTN1 CTNNBIP1 chr1 9970153 - CLSTN1 chr1 9833452 - Exonic hg19 STAD TCGA-HU-A4GH-01A 21 9 5'UTR-CDS Intra-chr p36.22 Tumor suppressor gene p36.22 Seq+ 53186 ChimerSeq STARFusion TCGA_RNA-Seq LRP5-SLC22A6 LRP5 chr11 68181480 + SLC22A6 chr11 62703958 - Exonic hg19 STAD TCGA-HU-A4GH-01A 22 4 CDS-3'UTR Intra-chr q13.2 q12.3 Seq+ 53187 ChimerSeq STARFusion TCGA_RNA-Seq POLDIP3-ARFGAP3 POLDIP3 chr22 42983512 - ARFGAP3 chr22 43204896 - Exonic hg19 STAD TCGA-HU-A4GH-01A 20 5 In-Frame Intra-chr q13.2 q13.2 Seq+ 53188 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-ANGPTL5 TMEM123 chr11 102319543 - ANGPTL5 chr11 101778732 - Exonic hg19 STAD TCGA-HU-A4GH-01A 17 11 CDS-5'UTR Intra-chr q22.2 q22.1 Seq+ 53189 ChimerSeq STARFusion TCGA_RNA-Seq CP-COMMD2 CP chr3 148895627 - COMMD2 chr3 149459505 - Exonic hg19 STAD TCGA-HU-A4GH-01A 18 4 In-Frame Intra-chr q25.1 q25.1 Seq+ 53190 ChimerSeq STARFusion TCGA_RNA-Seq PSMD11-RHOT1 PSMD11 chr17 30771632 + RHOT1 chr17 30580104 + Exonic hg19 STAD TCGA-HU-A4GH-01A 16 3 CDS-3'UTR Intra-chr q11.2 q11.2 Seq+ 53191 ChimerSeq STARFusion TCGA_RNA-Seq DYM-MYO5B DYM chr18 46986768 - MYO5B chr18 47581748 - Exonic hg19 STAD TCGA-HU-A4GH-01A 15 3 5'UTR-CDS Intra-chr q21.1 q21.1 Seq+ 53192 ChimerSeq STARFusion TCGA_RNA-Seq LUC7L3-SPATA20 LUC7L3 chr17 48797192 + SPATA20 chr17 48631612 + Exonic hg19 STAD TCGA-HU-A4GH-01A 15 3 Out-of-frame Intra-chr q21.33 q21.33 Seq+ 53193 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT1-RAF1 B4GALT1 chr9 33166756 - RAF1 chr3 12641914 - Exonic hg19 STAD TCGA-HU-A4GH-01A 15 1 Out-of-frame Inter-chr p21.1 p25.2 TKL:RAF Oncogene Seq+ 53194 ChimerSeq STARFusion TCGA_RNA-Seq CP-COMMD2 CP chr3 148894037 - COMMD2 chr3 149459505 - Exonic hg19 STAD TCGA-HU-A4GH-01A 14 4 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 53195 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0922-ARFIP1 KIAA0922 chr4 154477062 + ARFIP1 chr4 153831216 + Exonic hg19 STAD TCGA-HU-A4GH-01A 12 2 In-Frame Intra-chr q31.3 q31.3 Seq+ 53196 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-CCDC146 PTPN12 chr7 77230123 + CCDC146 chr7 76922269 + Exonic hg19 STAD TCGA-HU-A4GH-01A 11 5 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 53197 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-KCNQ1 NCOR2 chr12 124835133 - KCNQ1 chr11 2790074 + Exonic hg19 STAD TCGA-HU-A4GH-01A 12 0 Out-of-frame Inter-chr q24.31 p15.5 Seq+ 53198 ChimerSeq STARFusion TCGA_RNA-Seq DUS1L-ASPSCR1 DUS1L chr17 80022699 - ASPSCR1 chr17 79943383 + Exonic hg19 STAD TCGA-HU-A4GH-01A 6 17 In-Frame Intra-chr q25.3 q25.3 Seq+ 53199 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-CCDC146 PTPN12 chr7 77227218 + CCDC146 chr7 76922269 + Exonic hg19 STAD TCGA-HU-A4GH-01A 9 5 In-Frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 53200 ChimerSeq STARFusion TCGA_RNA-Seq SKAP1-HOXB7 SKAP1 chr17 46507437 - HOXB7 chr17 46685457 - Exonic hg19 STAD TCGA-HU-A4GH-01A 10 0 In-Frame Intra-chr q21.32 q21.32 Transcription factor Seq+ 53201 ChimerSeq STARFusion TCGA_RNA-Seq SETD5-SRGAP3 SETD5 chr3 9471735 + SRGAP3 chr3 9106265 - Exonic hg19 STAD TCGA-HU-A4GH-01A 7 10 Out-of-frame Intra-chr p25.3 p25.3 Tumor suppressor gene Seq+ 53202 ChimerSeq STARFusion TCGA_RNA-Seq LAMB2-C3orf84 LAMB2 chr3 49165891 - C3orf84 chr3 49215971 - Exonic hg19 STAD TCGA-HU-A4GH-01A 8 5 Out-of-frame Intra-chr p21.31 p21.31 53203 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-HAUS8 CEACAM5 chr19 42233234 + HAUS8 chr19 17184668 - Exonic hg19 STAD TCGA-HU-A4GH-01A 9 0 Out-of-frame Intra-chr q13.2 p13.11 53204 ChimerSeq STARFusion TCGA_RNA-Seq USP3-RAB8B USP3 chr15 63866602 + RAB8B chr15 63536955 + Exonic hg19 STAD TCGA-HU-A4GH-01A 8 2 In-Frame Intra-chr q22.31 q22.2 Seq+ 53205 ChimerSeq STARFusion TCGA_RNA-Seq DDOST-LYZ DDOST chr1 20978617 - LYZ chr12 69747551 + Exonic hg19 STAD TCGA-HU-A4GH-01A 8 1 Out-of-frame Inter-chr p36.12 q15 53206 ChimerSeq STARFusion TCGA_RNA-Seq DUS1L-ASPSCR1 DUS1L chr17 80022002 - ASPSCR1 chr17 79943383 + Exonic hg19 STAD TCGA-HU-A4GH-01A 4 17 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 53207 ChimerSeq STARFusion TCGA_RNA-Seq ATP7A-PGK1 ATP7A chrX 77166332 + PGK1 chrX 77352150 + Exonic hg19 STAD TCGA-HU-A4GH-01A 8 0 5'UTR-5'UTR Intra-chr q21.1 q21.1 Seq+ 53208 ChimerSeq STARFusion TCGA_RNA-Seq MSL2-STAG1 MSL2 chr3 135913814 - STAG1 chr3 136068205 - Exonic hg19 STAD TCGA-HU-A4GH-01A 7 1 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 53209 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-ANGPTL5 TMEM123 chr11 102319543 - ANGPTL5 chr11 101778700 - Exonic hg19 STAD TCGA-HU-A4GH-01A 4 11 CDS-5'UTR Intra-chr q22.2 q22.1 Seq+ 53210 ChimerSeq STARFusion TCGA_RNA-Seq RAB3B-TXNDC12 RAB3B chr1 52398990 - TXNDC12 chr1 52507269 - Exonic hg19 STAD TCGA-HU-A4GH-01A 6 2 In-Frame Intra-chr p32.3 p32.3 53211 ChimerSeq STARFusion TCGA_RNA-Seq HIPK2-TBXAS1 HIPK2 chr7 139477404 - TBXAS1 chr7 139487137 + Exonic hg19 STAD TCGA-HU-A4GH-01A 5 5 CDS-5'UTR Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Seq+ 53212 ChimerSeq STARFusion TCGA_RNA-Seq RAB10-ELMOD3 RAB10 chr2 26257604 + ELMOD3 chr2 85616874 + Exonic hg19 STAD TCGA-HU-A4GH-01A 6 1 Out-of-frame Intra-chr p23.3 p11.2 Seq+ 53213 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-HAUS8 CEACAM5 chr19 42233228 + HAUS8 chr19 17184674 - Exonic hg19 STAD TCGA-HU-A4GH-01A 6 0 Out-of-frame Intra-chr q13.2 p13.11 53214 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-ANGPTL5 TMEM123 chr11 102319543 - ANGPTL5 chr11 101765795 - Exonic hg19 STAD TCGA-HU-A4GH-01A 3 11 In-Frame Intra-chr q22.2 q22.1 Seq+ 53215 ChimerSeq STARFusion TCGA_RNA-Seq HIPK2-TBXAS1 HIPK2 chr7 139477404 - TBXAS1 chr7 139482465 + Exonic hg19 STAD TCGA-HU-A4GH-01A 4 5 CDS-5'UTR Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Seq+ 53216 ChimerSeq STARFusion TCGA_RNA-Seq WDR18-TMEM259 WDR18 chr19 994339 + TMEM259 chr19 1012572 - Exonic hg19 STAD TCGA-HU-A4GH-01A 5 1 Out-of-frame Intra-chr p13.3 p13.3 53217 ChimerSeq STARFusion TCGA_RNA-Seq KCNQ1-NCOR2 KCNQ1 chr11 2799267 + NCOR2 chr12 124911346 - Exonic hg19 STAD TCGA-HU-A4GH-01A 5 0 In-Frame Inter-chr p15.5 q24.31 53218 ChimerSeq STARFusion TCGA_RNA-Seq LRP5-SLC22A6 LRP5 chr11 68181480 + SLC22A6 chr11 62708302 - Exonic hg19 STAD TCGA-HU-A4GH-01A 4 4 CDS-3'UTR Intra-chr q13.2 q12.3 Seq+ 53219 ChimerSeq STARFusion TCGA_RNA-Seq TJP2-PIP5K1B TJP2 chr9 71855063 + PIP5K1B chr9 71555562 + Exonic hg19 STAD TCGA-HU-A4GH-01A 5 0 In-Frame Intra-chr q21.11 q21.11 53220 ChimerSeq STARFusion TCGA_RNA-Seq RAI1-SUB1 RAI1 chr17 17627473 + SUB1 chr5 32599067 + Exonic hg19 STAD TCGA-HU-A4GH-01A 4 1 5'UTR-CDS Inter-chr p11.2 p13.3 53221 ChimerSeq STARFusion TCGA_RNA-Seq ASCC1-MICU1 ASCC1 chr10 73956569 - MICU1 chr10 74135630 - Exonic hg19 STAD TCGA-HU-A4GH-01A 4 0 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 53222 ChimerSeq STARFusion TCGA_RNA-Seq CCDC146-PTPN12 CCDC146 chr7 76924255 + PTPN12 chr7 77200395 + Exonic hg19 STAD TCGA-HU-A4GH-01A 4 0 3'UTR-CDS Intra-chr q11.23 q11.23 Tumor suppressor gene 53223 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-snoU13 GNB1 chr1 1716739 - snoU13 chr5 149408918 - Exonic hg19 STAD TCGA-HU-A4GH-01A 4 0 Out-of-frame Inter-chr p36.33 53224 ChimerSeq STARFusion TCGA_RNA-Seq KIF26B-EFCAB2 KIF26B chr1 245319985 + EFCAB2 chr1 245245385 + Exonic hg19 STAD TCGA-HU-A4GH-01A 4 0 In-Frame Intra-chr q44 53225 ChimerSeq STARFusion TCGA_RNA-Seq LRP5-SLC22A6 LRP5 chr11 68181480 + SLC22A6 chr11 62704346 - Exonic hg19 STAD TCGA-HU-A4GH-01A 3 4 CDS-3'UTR Intra-chr q13.2 q12.3 Seq+ 53226 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-AGO2 PTK2 chr8 142011224 - AGO2 chr8 141595410 - Exonic hg19 STAD TCGA-HU-A4GH-01A 3 4 Out-of-frame Intra-chr q24.3 q24.3 53227 ChimerSeq STARFusion TCGA_RNA-Seq SKAP1-HOXB9 SKAP1 chr17 46507437 - HOXB9 chr17 46700497 - Exonic hg19 STAD TCGA-HU-A4GH-01A 4 0 In-Frame Intra-chr q21.32 q21.32 Transcription factor Seq+ 53228 ChimerSeq STARFusion TCGA_RNA-Seq SMURF1-KPNA7 SMURF1 chr7 98741349 - KPNA7 chr7 98805112 - Exonic hg19 STAD TCGA-HU-A4GH-01A 4 0 CDS-5'UTR Intra-chr Seq+ 53229 ChimerSeq STARFusion TCGA_RNA-Seq TESC-ZPBP2 TESC chr12 117476788 - ZPBP2 chr17 38026947 + Exonic hg19 STAD TCGA-HU-A4GH-01A 3 4 3'UTR-CDS Inter-chr q24.22 q21.1 53230 ChimerSeq STARFusion TCGA_RNA-Seq TESC-ZPBP2 TESC chr12 117476835 - ZPBP2 chr17 38026947 + Exonic hg19 STAD TCGA-HU-A4GH-01A 3 4 3'UTR-CDS Inter-chr q24.22 q21.1 53231 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA6-LRRN2 PLEKHA6 chr1 204340658 - LRRN2 chr1 204589346 - Exonic hg19 STAD TCGA-HU-A4GH-01A 3 3 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 53232 ChimerSeq STARFusion TCGA_RNA-Seq MEF2D-HDGF MEF2D chr1 156470278 - HDGF chr1 156715165 - Exonic hg19 STAD TCGA-HU-A4GH-01A 3 2 5'UTR-CDS Intra-chr q22 Transcription factor q23.1 53233 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L-LY6G5B SKIV2L chr6 31934623 + LY6G5B chr6 31640721 + Exonic hg19 STAD TCGA-HU-A4GH-01A 3 2 CDS-3'UTR Intra-chr 53234 ChimerSeq STARFusion TCGA_RNA-Seq ARAP1-OGFOD3 ARAP1 chr11 72398733 - OGFOD3 chr17 80352419 - Exonic hg19 STAD TCGA-HU-A4GH-01A 3 1 Out-of-frame Inter-chr q13.4 q25.3 53235 ChimerSeq STARFusion TCGA_RNA-Seq ATP2B4-RBBP4 ATP2B4 chr1 203596347 + RBBP4 chr1 33117515 + Exonic hg19 STAD TCGA-HU-A4GH-01A 3 1 5'UTR-5'UTR Intra-chr q32.1 p35.1 53236 ChimerSeq STARFusion TCGA_RNA-Seq KIF1B-UBE4B KIF1B chr1 10357304 + UBE4B chr1 10189450 + Exonic hg19 STAD TCGA-HU-A4GH-01A 3 1 In-Frame Intra-chr p36.22 Tumor suppressor gene p36.22 Tumor suppressor gene Seq+ 53237 ChimerSeq STARFusion TCGA_RNA-Seq MSL2-STAG1 MSL2 chr3 135913814 - STAG1 chr3 136076690 - Exonic hg19 STAD TCGA-HU-A4GH-01A 3 1 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 53238 ChimerSeq STARFusion TCGA_RNA-Seq RNF19A-SNX31 RNF19A chr8 101287181 - SNX31 chr8 101648239 - Exonic hg19 STAD TCGA-HU-A4GH-01A 3 1 Out-of-frame Intra-chr q22.2 q22.3 Seq+ 53239 ChimerSeq STARFusion TCGA_RNA-Seq ABI1-MUC5B ABI1 chr10 27040644 - MUC5B chr11 1268202 + Exonic hg19 STAD TCGA-HU-A4GH-01A 3 0 Out-of-frame Inter-chr p12.1 p15.5 53240 ChimerSeq STARFusion TCGA_RNA-Seq AKR1A1-PRDX1 AKR1A1 chr1 46034671 + PRDX1 chr1 45984726 - Exonic hg19 STAD TCGA-HU-A4GH-01A 3 0 CDS-5'UTR Intra-chr p34.1 p34.1 53241 ChimerSeq STARFusion TCGA_RNA-Seq ATP7A-PGK1 ATP7A chrX 77166332 + PGK1 chrX 77365364 + Exonic hg19 STAD TCGA-HU-A4GH-01A 3 0 5'UTR-CDS Intra-chr q21.1 q21.1 Seq+ 53242 ChimerSeq STARFusion TCGA_RNA-Seq EEPD1-SEPT7P3 EEPD1 chr7 36194811 + SEPT7P3 chr7 36012057 + Exonic hg19 STAD TCGA-HU-A4GH-01A 3 0 Out-of-frame Intra-chr p14.2 p14.2 53243 ChimerSeq STARFusion TCGA_RNA-Seq GNE-RNF38 GNE chr9 36276891 - RNF38 chr9 36390613 - Exonic hg19 STAD TCGA-HU-A4GH-01A 3 0 In-Frame Intra-chr p13.3 p13.2 53244 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK2-MROH3P MAPKAPK2 chr1 206906616 + MROH3P chr1 200929460 + Exonic hg19 STAD TCGA-HU-A4GH-01A 3 0 Out-of-frame Intra-chr q32.1 CAMK:MAPKAPK q32.1 53245 ChimerSeq STARFusion TCGA_RNA-Seq POLD3-YLPM1 POLD3 chr11 74336617 + YLPM1 chr14 75269257 + Exonic hg19 STAD TCGA-HU-A4GH-01A 3 0 Out-of-frame Inter-chr q13.4 q24.3 53246 ChimerSeq STARFusion TCGA_RNA-Seq SSH2-BLMH SSH2 chr17 28256956 - BLMH chr17 28618526 - Exonic hg19 STAD TCGA-HU-A4GH-01A 3 0 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 53247 ChimerSeq STARFusion TCGA_RNA-Seq TESC-ZPBP2 TESC chr12 117494611 - ZPBP2 chr17 38029297 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 4 Out-of-frame Inter-chr q24.22 q21.1 53248 ChimerSeq STARFusion TCGA_RNA-Seq TSPO-MBTD1 TSPO chr22 43559236 + MBTD1 chr17 49256761 - Exonic hg19 STAD TCGA-HU-A4GH-01A 3 0 Out-of-frame Inter-chr q13.2 q21.33 53249 ChimerSeq STARFusion TCGA_RNA-Seq MEF2D-HDGF MEF2D chr1 156469224 - HDGF chr1 156715165 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 2 5'UTR-CDS Intra-chr q22 Transcription factor q23.1 53250 ChimerSeq STARFusion TCGA_RNA-Seq RAB10-ELMOD3 RAB10 chr2 26257604 + ELMOD3 chr2 85617261 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 1 Out-of-frame Intra-chr p23.3 p11.2 Seq+ 53251 ChimerSeq STARFusion TCGA_RNA-Seq AASDH-ANKRD17 AASDH chr4 57253528 - ANKRD17 chr4 73968264 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 5'UTR-CDS Intra-chr q12 q13.3 53252 ChimerSeq STARFusion TCGA_RNA-Seq ABCC3-ANKRD40 ABCC3 chr17 48712342 + ANKRD40 chr17 48778077 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 Out-of-frame Intra-chr q21.33 q21.33 53253 ChimerSeq STARFusion TCGA_RNA-Seq AHCYL1-ZFYVE9 AHCYL1 chr1 110527794 + ZFYVE9 chr1 52798440 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 In-Frame Intra-chr p13.3 Tumor suppressor gene p32.3 53254 ChimerSeq STARFusion TCGA_RNA-Seq ARFIP1-NAA15 ARFIP1 chr4 153701378 + NAA15 chr4 140314745 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 5'UTR-3'UTR Intra-chr q31.3 q31.1 53255 ChimerSeq STARFusion TCGA_RNA-Seq ATG16L1-ACSL3 ATG16L1 chr2 234164841 + ACSL3 chr2 223806215 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 Out-of-frame Intra-chr q36.1 53256 ChimerSeq STARFusion TCGA_RNA-Seq AZIN1-FDFT1 AZIN1 chr8 103870241 - FDFT1 chr8 11695897 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 5'UTR-CDS Intra-chr q22.3 p23.1 53257 ChimerSeq STARFusion TCGA_RNA-Seq B3GNTL1-METRNL B3GNTL1 chr17 80992911 - METRNL chr17 81042814 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 Out-of-frame Intra-chr 53258 ChimerSeq STARFusion TCGA_RNA-Seq BCR-FAM192A BCR chr22 23615961 + FAM192A chr16 57207781 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 CDS-5'UTR Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q13 53259 ChimerSeq STARFusion TCGA_RNA-Seq BLCAP-CPNE1 BLCAP chr20 36147634 - CPNE1 chr20 34220845 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 5'UTR-5'UTR Intra-chr q11.23 Tumor suppressor gene q11.22 53260 ChimerSeq STARFusion TCGA_RNA-Seq BZW2-AGR3 BZW2 chr7 16722470 + AGR3 chr7 16899255 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 Out-of-frame Intra-chr p21.1 p21.1 53261 ChimerSeq STARFusion TCGA_RNA-Seq C14orf105-PTPN2 C14orf105 chr14 57942300 - PTPN2 chr18 12859253 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 Out-of-frame Inter-chr q22.3 p11.21 Tumor suppressor gene 53262 ChimerSeq STARFusion TCGA_RNA-Seq C19orf10-CHAF1A C19orf10 chr19 4668607 - CHAF1A chr19 4422563 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 In-Frame Intra-chr p13.3 53263 ChimerSeq STARFusion TCGA_RNA-Seq C4BPA-CDC73 C4BPA chr1 207277775 + CDC73 chr1 193218860 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 5'UTR-CDS Intra-chr q32.2 q31.2 Oncogene Tumor suppressor gene 53264 ChimerSeq STARFusion TCGA_RNA-Seq CAB39L-USP25 CAB39L chr13 50007454 - USP25 chr21 17172076 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 5'UTR-CDS Inter-chr q14.2 q21.1 53265 ChimerSeq STARFusion TCGA_RNA-Seq CCDC146-MYOM3 CCDC146 chr7 76797141 + MYOM3 chr1 24394857 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 In-Frame Inter-chr q11.23 p36.11 Seq+ 53266 ChimerSeq STARFusion TCGA_RNA-Seq CD44-HNRNPA2B1 CD44 chr11 35236461 + HNRNPA2B1 chr7 26230080 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 CDS-3'UTR Inter-chr p13 Oncogene Tumor suppressor gene p15.2 53267 ChimerSeq STARFusion TCGA_RNA-Seq CD55-MPC2 CD55 chr1 207500182 + MPC2 chr1 167889328 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 Out-of-frame Intra-chr q32.2 q24.2 53268 ChimerSeq STARFusion TCGA_RNA-Seq CHCHD3-CYP51A1 CHCHD3 chr7 132570422 - CYP51A1 chr7 91761186 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 In-Frame Intra-chr q33 Transcription factor q21.2 53269 ChimerSeq STARFusion TCGA_RNA-Seq CHCHD3-LRRD1 CHCHD3 chr7 132570422 - LRRD1 chr7 91761186 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 CDS-3'UTR Intra-chr q33 Transcription factor q21.2 53270 ChimerSeq STARFusion TCGA_RNA-Seq CPSF3L-SCNN1D CPSF3L chr1 1248889 - SCNN1D chr1 1225651 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 In-Frame Intra-chr p36.33 53271 ChimerSeq STARFusion TCGA_RNA-Seq DLEU1-CUL4A DLEU1 chr13 50657330 + CUL4A chr13 113873259 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 5'UTR-5'UTR Intra-chr q14.2 Tumor suppressor gene q34 53272 ChimerSeq STARFusion TCGA_RNA-Seq DLEU2-KLF5 DLEU2 chr13 50655959 - KLF5 chr13 73635999 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 3'UTR-CDS Intra-chr q14.2 Tumor suppressor gene q22.1 Tumor suppressor gene Transcription factor 53273 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC3-GPC6 DNAJC3 chr13 96329591 + GPC6 chr13 94482407 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 In-Frame Intra-chr q32.1 q31.3 Seq+ 53274 ChimerSeq STARFusion TCGA_RNA-Seq GRAMD4-TBC1D22A GRAMD4 chr22 47033857 + TBC1D22A chr22 47393530 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 53275 ChimerSeq STARFusion TCGA_RNA-Seq GTPBP10-GALK2 GTPBP10 chr7 89976088 + GALK2 chr15 49610308 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 Out-of-frame Inter-chr q21.13 q21.1 53276 ChimerSeq STARFusion TCGA_RNA-Seq HP1BP3-CAPZB HP1BP3 chr1 21113688 - CAPZB chr1 19671746 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 5'UTR-CDS Intra-chr p36.12 p36.13 53277 ChimerSeq STARFusion TCGA_RNA-Seq IRF2-RFC1 IRF2 chr4 185320069 - RFC1 chr4 39329376 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 In-Frame Intra-chr q35.1 Transcription factor p14 53278 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-RHAG KCTD20 chr6 36410888 + RHAG chr6 49573543 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 5'UTR-CDS Intra-chr p21.31 p12.3 53279 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1217-KLF6 KIAA1217 chr10 24762989 + KLF6 chr10 3824406 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 Out-of-frame Intra-chr p12.2 p15.2 Oncogene Tumor suppressor gene Transcription factor 53280 ChimerSeq STARFusion TCGA_RNA-Seq LEMD3-SRGAP1 LEMD3 chr12 65564898 + SRGAP1 chr12 64505542 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 Out-of-frame Intra-chr q14.3 q14.2 53281 ChimerSeq STARFusion TCGA_RNA-Seq LRBA-ELF2 LRBA chr4 151604703 - ELF2 chr4 139994721 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 Out-of-frame Intra-chr q31.3 q31.1 Transcription factor 53282 ChimerSeq STARFusion TCGA_RNA-Seq LZIC-FAM156A LZIC chr1 10002682 - FAM156A chrX 52985544 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 5'UTR-5'UTR Inter-chr p36.22 p11.22 53283 ChimerSeq STARFusion TCGA_RNA-Seq MECOM-SEC62 MECOM chr3 169098975 - SEC62 chr3 169693396 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 In-Frame Intra-chr q26.2 Transcription factor q26.2 53284 ChimerSeq STARFusion TCGA_RNA-Seq MED15-LYZ MED15 chr22 20905774 + LYZ chr12 69743888 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 In-Frame Inter-chr q11.21 q15 53285 ChimerSeq STARFusion TCGA_RNA-Seq NCK2-LANCL1 NCK2 chr2 106361595 + LANCL1 chr2 211320038 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 5'UTR-CDS Intra-chr q12.2 q34 53286 ChimerSeq STARFusion TCGA_RNA-Seq NCOA7-SERPINB1 NCOA7 chr6 126243980 + SERPINB1 chr6 2838920 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 In-Frame Intra-chr q22.31 p25.2 53287 ChimerSeq STARFusion TCGA_RNA-Seq NCOA7-TAF6 NCOA7 chr6 126107359 + TAF6 chr7 99711891 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 5'UTR-5'UTR Inter-chr q22.31 q22.1 53288 ChimerSeq STARFusion TCGA_RNA-Seq NKTR-HAUS2 NKTR chr3 42674315 + HAUS2 chr15 42858805 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 Out-of-frame Inter-chr p22.1 q15.2 53289 ChimerSeq STARFusion TCGA_RNA-Seq OTUD4-GALNT7 OTUD4 chr4 146100967 - GALNT7 chr4 174169131 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 5'UTR-CDS Intra-chr q31.21 q34.1 53290 ChimerSeq STARFusion TCGA_RNA-Seq PDZD8-SGMS1 PDZD8 chr10 119133867 - SGMS1 chr10 52104105 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 CDS-5'UTR Intra-chr q26.11 q11.23 Tumor suppressor gene 53291 ChimerSeq STARFusion TCGA_RNA-Seq PLEC-NECAB3 PLEC chr8 145016560 - NECAB3 chr20 32248201 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 Out-of-frame Inter-chr q24.3 q11.22 53292 ChimerSeq STARFusion TCGA_RNA-Seq POLR1B-SIPA1L3 POLR1B chr2 113317151 + SIPA1L3 chr19 38631824 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 Out-of-frame Inter-chr q14.1 q13.13 53293 ChimerSeq STARFusion TCGA_RNA-Seq PPIC-TRPM7 PPIC chr5 122365000 - TRPM7 chr15 50905026 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 In-Frame Inter-chr q23.2 q21.2 53294 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-NDUFB2 PTK2 chr8 141993941 - NDUFB2 chr7 140402666 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 5'UTR-CDS Inter-chr q24.3 q34 53295 ChimerSeq STARFusion TCGA_RNA-Seq RAB11B-NCAM2 RAB11B chr19 8455340 + NCAM2 chr21 22696703 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 In-Frame Inter-chr p13.2 q21.1 Tumor suppressor gene 53296 ChimerSeq STARFusion TCGA_RNA-Seq RARRES1-CD46 RARRES1 chr3 158428527 - CD46 chr1 207930359 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 In-Frame Inter-chr q25.32 q32.2 53297 ChimerSeq STARFusion TCGA_RNA-Seq RBM48-PEX1 RBM48 chr7 92161863 + PEX1 chr7 92116855 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 Out-of-frame Intra-chr q21.2 q21.2 53298 ChimerSeq STARFusion TCGA_RNA-Seq SDF4-GAK SDF4 chr1 1158624 - GAK chr4 898567 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 In-Frame Inter-chr p36.33 p16.3 Other:NAK 53299 ChimerSeq STARFusion TCGA_RNA-Seq SETD8-UBB SETD8 chr12 123868755 + UBB chr17 16285216 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 CDS-5'UTR Inter-chr p11.2 53300 ChimerSeq STARFusion TCGA_RNA-Seq SH3RF1-CBR4 SH3RF1 chr4 170076631 - CBR4 chr4 169911479 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 Out-of-frame Intra-chr q33 q32.3 53301 ChimerSeq STARFusion TCGA_RNA-Seq SNRPA1-RAB11A SNRPA1 chr15 101835302 - RAB11A chr15 66180039 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 In-Frame Intra-chr q26.3 q22.31 53302 ChimerSeq STARFusion TCGA_RNA-Seq SPRED1-SFPQ SPRED1 chr15 38545418 + SFPQ chr1 35643637 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 CDS-3'UTR Inter-chr q14 p34.3 53303 ChimerSeq STARFusion TCGA_RNA-Seq SPTBN1-C2orf73 SPTBN1 chr2 54864940 + C2orf73 chr2 54608983 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 CDS-3'UTR Intra-chr p16.2 Tumor suppressor gene p16.2 53304 ChimerSeq STARFusion TCGA_RNA-Seq TBL2-RPL22 TBL2 chr7 72992750 - RPL22 chr1 6246876 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 Out-of-frame Inter-chr q11.23 Tumor suppressor gene p36.31 53305 ChimerSeq STARFusion TCGA_RNA-Seq TESC-UBE2J2 TESC chr12 117537030 - UBE2J2 chr1 1203372 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 CDS-5'UTR Inter-chr q24.22 p36.33 53306 ChimerSeq STARFusion TCGA_RNA-Seq TMEM181-IPO5 TMEM181 chr6 159049522 + IPO5 chr13 98666296 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 In-Frame Inter-chr q25.3 q32.2 53307 ChimerSeq STARFusion TCGA_RNA-Seq TMEM8A-NAA35 TMEM8A chr16 431701 - NAA35 chr9 88557070 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 CDS-5'UTR Inter-chr p13.3 q21.33 53308 ChimerSeq STARFusion TCGA_RNA-Seq TXLNG-RBBP7 TXLNG chrX 16858039 + RBBP7 chrX 16857513 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 CDS-3'UTR Intra-chr p22.2 p22.2 Tumor suppressor gene 53309 ChimerSeq STARFusion TCGA_RNA-Seq URI1-PAPPA2 URI1 chr19 30433571 + PAPPA2 chr1 176738743 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 In-Frame Inter-chr q12 q25.2 53310 ChimerSeq STARFusion TCGA_RNA-Seq USP54-NUDT21 USP54 chr10 75385695 - NUDT21 chr16 56468741 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 5'UTR-CDS Inter-chr q22.2 q13 53311 ChimerSeq STARFusion TCGA_RNA-Seq WASH3P-HRAS WASH3P chr15 102506426 + HRAS chr11 534375 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 5'UTR-5'UTR Inter-chr q26.3 p15.5 Oncogene 53312 ChimerSeq STARFusion TCGA_RNA-Seq WDR7-TXNL1 WDR7 chr18 54385390 + TXNL1 chr18 54270287 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 Out-of-frame Intra-chr q21.31 q21.31 53313 ChimerSeq STARFusion TCGA_RNA-Seq YAE1D1-EEF1D YAE1D1 chr7 39610226 + EEF1D chr8 144669022 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 In-Frame Inter-chr p14.1 53314 ChimerSeq STARFusion TCGA_RNA-Seq YLPM1-FAM120A YLPM1 chr14 75287840 + FAM120A chr9 96305504 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 Out-of-frame Inter-chr q24.3 q22.31 53315 ChimerSeq STARFusion TCGA_RNA-Seq ZNF248-LINC00342 ZNF248 chr10 38126545 - LINC00342 chr2 96473050 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 Out-of-frame Inter-chr p11.21 Transcription factor q11.1 53316 ChimerSeq STARFusion TCGA_RNA-Seq ZNF280D-RNF111 ZNF280D chr15 56996319 - RNF111 chr15 59373135 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 In-Frame Intra-chr q21.3 Transcription factor q22.1 Tumor suppressor gene Seq+ 53317 ChimerSeq STARFusion TCGA_RNA-Seq ZNF609-DPP8 ZNF609 chr15 64792365 + DPP8 chr15 65759561 - Exonic hg19 STAD TCGA-HU-A4GH-01A 2 0 In-Frame Intra-chr q22.31 Transcription factor q22.31 53318 ChimerSeq STARFusion TCGA_RNA-Seq FUS-TMEM114 FUS chr16 31196500 + TMEM114 chr16 8622226 - Exonic hg19 STAD TCGA-HU-A4HB-01A 71 35 5'UTR-5'UTR Intra-chr p11.2 Tumor suppressor gene p13.2 Seq+ 53319 ChimerSeq STARFusion TCGA_RNA-Seq BMS1P20-IGLC3 BMS1P20 chr22 22677080 + IGLC3 chr22 23248512 + Exonic hg19 STAD TCGA-HU-A4HB-01A 6 0 Out-of-frame Intra-chr q11.22 53320 ChimerSeq STARFusion TCGA_RNA-Seq PMM2-RBFOX1 PMM2 chr16 8906963 + RBFOX1 chr16 7568149 + Exonic hg19 STAD TCGA-HU-A4HB-01A 4 4 In-Frame Intra-chr p13.2 p13.3 53321 ChimerSeq STARFusion TCGA_RNA-Seq CAMK4-PTPRK CAMK4 chr5 110712640 + PTPRK chr6 128563747 - Exonic hg19 STAD TCGA-HU-A4HB-01A 4 1 Out-of-frame Inter-chr q22.1 Tumor suppressor gene 53322 ChimerSeq STARFusion TCGA_RNA-Seq C6orf141-ZNF529 C6orf141 chr6 49522870 + ZNF529 chr19 37073608 - Exonic hg19 STAD TCGA-HU-A4HB-01A 4 0 Out-of-frame Inter-chr p12.3 q13.12 Transcription factor 53323 ChimerSeq STARFusion TCGA_RNA-Seq AP2M1-GOLM1 AP2M1 chr3 183900617 + GOLM1 chr9 88641231 - Exonic hg19 STAD TCGA-HU-A4HB-01A 3 0 Out-of-frame Inter-chr q27.1 q21.33 53324 ChimerSeq STARFusion TCGA_RNA-Seq CST3-TRIM38 CST3 chr20 23618501 - TRIM38 chr6 25972207 + Exonic hg19 STAD TCGA-HU-A4HB-01A 3 0 Out-of-frame Inter-chr p11.21 p22.2 53325 ChimerSeq STARFusion TCGA_RNA-Seq DDX42-SLC46A3 DDX42 chr17 61876986 + SLC46A3 chr13 29275688 - Exonic hg19 STAD TCGA-HU-A4HB-01A 3 0 Out-of-frame Inter-chr q23.3 q12.3 53326 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPA2B1-IGHJ3 HNRNPA2B1 chr7 26240404 - IGHJ3 chr14 106330841 - Exonic hg19 STAD TCGA-HU-A4HB-01A 3 0 Out-of-frame Inter-chr p15.2 q32.33 53327 ChimerSeq STARFusion TCGA_RNA-Seq HSPBP1-GRK5 HSPBP1 chr19 55790902 - GRK5 chr10 120967223 + Exonic hg19 STAD TCGA-HU-A4HB-01A 3 0 Out-of-frame Inter-chr q13.42 q26.11 53328 ChimerSeq STARFusion TCGA_RNA-Seq IGHJ6-IGLL5 IGHJ6 chr14 106329413 - IGLL5 chr22 23237553 + Exonic hg19 STAD TCGA-HU-A4HB-01A 3 0 Out-of-frame Inter-chr q11.22 53329 ChimerSeq STARFusion TCGA_RNA-Seq MUC3A-MDH2 MUC3A chr7 100549781 + MDH2 chr7 75694244 + Exonic hg19 STAD TCGA-HU-A4HB-01A 3 0 Out-of-frame Intra-chr q22.1 q11.23 53330 ChimerSeq STARFusion TCGA_RNA-Seq PPA2-ARFIP1 PPA2 chr4 106367540 - ARFIP1 chr4 153784758 + Exonic hg19 STAD TCGA-HU-A4HB-01A 3 0 In-Frame Intra-chr q24 q31.3 Seq+ 53331 ChimerSeq STARFusion TCGA_RNA-Seq SSBP3-AR SSBP3 chr1 54871734 - AR chrX 66766373 + Exonic hg19 STAD TCGA-HU-A4HB-01A 3 0 Out-of-frame Inter-chr p32.3 q12 Oncogene Tumor suppressor gene Transcription factor 53332 ChimerSeq STARFusion TCGA_RNA-Seq AHI1-RPL22 AHI1 chr6 135811761 - RPL22 chr1 6257816 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 In-Frame Inter-chr q23.3 p36.31 53333 ChimerSeq STARFusion TCGA_RNA-Seq ASNSD1-RPL3 ASNSD1 chr2 190526336 + RPL3 chr22 39710213 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 5'UTR-CDS Inter-chr q32.2 q13.1 53334 ChimerSeq STARFusion TCGA_RNA-Seq ATP2C1-FAIM ATP2C1 chr3 130720158 + FAIM chr3 138340249 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 Out-of-frame Intra-chr q22.1 q22.3 53335 ChimerSeq STARFusion TCGA_RNA-Seq BRAP-ATXN2 BRAP chr12 112096540 - ATXN2 chr12 111908546 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 Out-of-frame Intra-chr q24.12 q24.12 53336 ChimerSeq STARFusion TCGA_RNA-Seq BROX-MIA3 BROX chr1 222892373 + MIA3 chr1 222832064 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 Out-of-frame Intra-chr q41 q41 53337 ChimerSeq STARFusion TCGA_RNA-Seq C10orf118-SLC9A3R1 C10orf118 chr10 115933774 - SLC9A3R1 chr17 72758151 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 5'UTR-CDS Inter-chr q25.1 Tumor suppressor gene 53338 ChimerSeq STARFusion TCGA_RNA-Seq CAPN8-LZTR1 CAPN8 chr1 223722681 - LZTR1 chr22 21350985 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 Out-of-frame Inter-chr q41 q11.21 53339 ChimerSeq STARFusion TCGA_RNA-Seq CD59-CTAGE5 CD59 chr11 33752970 - CTAGE5 chr14 39746138 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 5'UTR-5'UTR Inter-chr p13 q21.1 53340 ChimerSeq STARFusion TCGA_RNA-Seq CFTR-SEC23IP CFTR chr7 117199709 + SEC23IP chr10 121685548 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 In-Frame Inter-chr q31.2 Tumor suppressor gene q26.11 53341 ChimerSeq STARFusion TCGA_RNA-Seq CHD1-PAPD7 CHD1 chr5 98262038 - PAPD7 chr5 6737623 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 CDS-5'UTR Intra-chr q21.1 Tumor suppressor gene p15.31 53342 ChimerSeq STARFusion TCGA_RNA-Seq CSRNP1-PARP9 CSRNP1 chr3 39186488 - PARP9 chr3 122247590 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 Out-of-frame Intra-chr p22.2 Tumor suppressor gene Transcription factor q21.1 53343 ChimerSeq STARFusion TCGA_RNA-Seq DANCR-SLC35A3 DANCR chr4 53579126 + SLC35A3 chr1 100459093 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 5'UTR-5'UTR Inter-chr q12 p21.2 53344 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB14-BMI1 DNAJB14 chr4 100867596 - BMI1 chr10 22615360 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 CDS-5'UTR Inter-chr q23 p12.2 53345 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC24-IMMP1L DNAJC24 chr11 31392406 + IMMP1L chr11 31455117 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 In-Frame Intra-chr p13 p13 Seq+ 53346 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G3-CDC42 EIF4G3 chr1 21377359 - CDC42 chr1 22404922 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 5'UTR-5'UTR Intra-chr p36.12 p36.12 53347 ChimerSeq STARFusion TCGA_RNA-Seq ELF2-KRT8 ELF2 chr4 140046318 - KRT8 chr12 53295856 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 Out-of-frame Inter-chr q31.1 Transcription factor q13.13 53348 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L5-SYTL2 EPB41L5 chr2 120889291 + SYTL2 chr11 85420543 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 In-Frame Inter-chr q14.2 q14.1 53349 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-FOXN2 FCHSD2 chr11 72794740 - FOXN2 chr2 48555700 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 CDS-5'UTR Inter-chr q13.4 p16.3 Transcription factor 53350 ChimerSeq STARFusion TCGA_RNA-Seq FNIP2-RAPGEF2 FNIP2 chr4 159690471 + RAPGEF2 chr4 160225494 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 Out-of-frame Intra-chr q32.1 q32.1 53351 ChimerSeq STARFusion TCGA_RNA-Seq FUCA2-FIP1L1 FUCA2 chr6 143828374 - FIP1L1 chr4 54265897 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 Out-of-frame Inter-chr q24.2 q12 53352 ChimerSeq STARFusion TCGA_RNA-Seq GOLGA5-DICER1 GOLGA5 chr14 93264326 + DICER1 chr14 95599840 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 CDS-5'UTR Intra-chr q32.12 q32.13 Oncogene Tumor suppressor gene 53353 ChimerSeq STARFusion TCGA_RNA-Seq GPR160-SEC62 GPR160 chr3 169756831 + SEC62 chr3 169693396 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 5'UTR-CDS Intra-chr q26.2 q26.2 Seq+ 53354 ChimerSeq STARFusion TCGA_RNA-Seq HGSNAT-LINC00511 HGSNAT chr8 42995757 + LINC00511 chr17 70400957 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 CDS-3'UTR Inter-chr p11.21 q24.3 53355 ChimerSeq STARFusion TCGA_RNA-Seq HSPA9-ARID4B HSPA9 chr5 137895553 - ARID4B chr1 235295312 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 CDS-3'UTR Inter-chr q31.2 q42.3 53356 ChimerSeq STARFusion TCGA_RNA-Seq HSPA9-RBM34 HSPA9 chr5 137895553 - RBM34 chr1 235295312 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 In-Frame Inter-chr q31.2 q42.3 53357 ChimerSeq STARFusion TCGA_RNA-Seq IK-PAIP2 IK chr5 140028122 + PAIP2 chr5 138704422 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 Out-of-frame Intra-chr q31.3 q31.2 Tumor suppressor gene 53358 ChimerSeq STARFusion TCGA_RNA-Seq IL15RA-B2M IL15RA chr10 6019368 - B2M chr15 45007621 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 In-Frame Inter-chr p15.1 Oncogene 53359 ChimerSeq STARFusion TCGA_RNA-Seq JMJD1C-NEMF JMJD1C chr10 64936057 - NEMF chr14 50256061 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 In-Frame Inter-chr q21.3 q21.3 53360 ChimerSeq STARFusion TCGA_RNA-Seq KCMF1-BTG3 KCMF1 chr2 85198590 + BTG3 chr21 18981470 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 CDS-5'UTR Inter-chr p11.2 Transcription factor Tumor suppressor gene 53361 ChimerSeq STARFusion TCGA_RNA-Seq KIF5B-HERC4 KIF5B chr10 32337392 - HERC4 chr10 69726559 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 Out-of-frame Intra-chr p11.22 q21.3 53362 ChimerSeq STARFusion TCGA_RNA-Seq KRT19-TMEM9 KRT19 chr17 39684080 - TMEM9 chr1 201123087 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 CDS-5'UTR Inter-chr q21.2 Tumor suppressor gene q32.1 53363 ChimerSeq STARFusion TCGA_RNA-Seq LSP1-B2M LSP1 chr11 1874427 + B2M chr15 45007621 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 Out-of-frame Inter-chr p15.5 Oncogene 53364 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K1-KDM4C MAP3K1 chr5 56168832 + KDM4C chr9 7103685 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 In-Frame Inter-chr q11.2 STE:STE11 Oncogene p24.1 53365 ChimerSeq STARFusion TCGA_RNA-Seq MARCH7-SEC24A 2019_ 3_ 7_ chr2 160599764 + SEC24A chr5 134028292 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 Out-of-frame Inter-chr q24.2 q31.1 53366 ChimerSeq STARFusion TCGA_RNA-Seq MRPS23-BRI3 MRPS23 chr17 55926601 - BRI3 chr7 97920423 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 In-Frame Inter-chr q22 q21.3 53367 ChimerSeq STARFusion TCGA_RNA-Seq MYPOP-ZNF789 MYPOP chr19 46404533 - ZNF789 chr7 99074026 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 CDS-5'UTR Inter-chr q13.32 Transcription factor q22.1 Transcription factor 53368 ChimerSeq STARFusion TCGA_RNA-Seq NAALADL2-CCM2 NAALADL2 chr3 174158822 + CCM2 chr7 45103517 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 5'UTR-5'UTR Inter-chr q26.31 p13 53369 ChimerSeq STARFusion TCGA_RNA-Seq NLRP1-FAM193B NLRP1 chr17 5485179 - FAM193B chr5 176966148 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 Out-of-frame Inter-chr p13.2 Oncogene q35.3 53370 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2NL-PLSCR1 NOTCH2NL chr1 145209436 + PLSCR1 chr3 146251337 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 5'UTR-CDS Inter-chr q21.1 q24 Transcription factor 53371 ChimerSeq STARFusion TCGA_RNA-Seq NOX5-SDK1 NOX5 chr15 69223056 + SDK1 chr7 4050598 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 Out-of-frame Inter-chr q23 p22.2 53372 ChimerSeq STARFusion TCGA_RNA-Seq PAK1-CAPN5 PAK1 chr11 77184597 - CAPN5 chr11 76823635 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 5'UTR-CDS Intra-chr q14.1 STE:STE20 q13.5 53373 ChimerSeq STARFusion TCGA_RNA-Seq PAK1IP1-NUP153 PAK1IP1 chr6 10705077 + NUP153 chr6 17669777 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 Out-of-frame Intra-chr p24.2 p22.3 53374 ChimerSeq STARFusion TCGA_RNA-Seq PARN-DCUN1D4 PARN chr16 14722048 - DCUN1D4 chr4 52726709 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 Out-of-frame Inter-chr q12 53375 ChimerSeq STARFusion TCGA_RNA-Seq PHC3-GPR160 PHC3 chr3 169814960 - GPR160 chr3 169797562 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 3'UTR-5'UTR Intra-chr q26.2 Tumor suppressor gene q26.2 53376 ChimerSeq STARFusion TCGA_RNA-Seq PIP5K1B-FAM120A PIP5K1B chr9 71320678 + FAM120A chr9 96259753 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 5'UTR-CDS Intra-chr q21.11 q22.31 53377 ChimerSeq STARFusion TCGA_RNA-Seq PITPNC1-NFE2L1 PITPNC1 chr17 65628354 + NFE2L1 chr17 46133748 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 In-Frame Intra-chr q24.2 q21.32 Transcription factor 53378 ChimerSeq STARFusion TCGA_RNA-Seq PLAC8-SERPINB6 PLAC8 chr4 84035819 - SERPINB6 chr6 2959576 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 5'UTR-5'UTR Inter-chr q21.22 p25.2 53379 ChimerSeq STARFusion TCGA_RNA-Seq PPM1A-HIF1A PPM1A chr14 60735153 + HIF1A chr14 62199136 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 5'UTR-CDS Intra-chr q23.1 Tumor suppressor gene q23.2 Oncogene Tumor suppressor gene Transcription factor 53380 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R5C-SIRT5 PPP2R5C chr14 102252520 + SIRT5 chr6 13579683 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 CDS-5'UTR Inter-chr q32.31 Tumor suppressor gene p23 53381 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-NCOA1 PPP6R3 chr11 68287119 + NCOA1 chr2 24807345 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 5'UTR-5'UTR Inter-chr q13.2 p23.3 Oncogene Transcription factor 53382 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2B-MYH9 PRRC2B chr9 134269650 + MYH9 chr22 36745300 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 5'UTR-5'UTR Inter-chr q34.13 q12.3 Oncogene Tumor suppressor gene 53383 ChimerSeq STARFusion TCGA_RNA-Seq RBM18-EPS15 RBM18 chr9 125009797 - EPS15 chr1 51860119 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 In-Frame Inter-chr q33.2 p32.3 53384 ChimerSeq STARFusion TCGA_RNA-Seq SHROOM3-PIGN SHROOM3 chr4 77507622 + PIGN chr18 59713212 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 Out-of-frame Inter-chr q21.1 q21.33 53385 ChimerSeq STARFusion TCGA_RNA-Seq SLC6A14-RPS6KA3 SLC6A14 chrX 115582835 + RPS6KA3 chrX 20183178 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 Out-of-frame Intra-chr q23 p22.12 53386 ChimerSeq STARFusion TCGA_RNA-Seq SMS-ACSL4 SMS chrX 21958991 + ACSL4 chrX 108939425 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 CDS-5'UTR Intra-chr p22.11 q23 53387 ChimerSeq STARFusion TCGA_RNA-Seq SPESP1-SDK1 SPESP1 chr15 69223056 + SDK1 chr7 4050598 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 In-Frame Inter-chr q23 p22.2 53388 ChimerSeq STARFusion TCGA_RNA-Seq SPOP-TFDP2 SPOP chr17 47755295 - TFDP2 chr3 141724386 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 5'UTR-5'UTR Inter-chr q21.33 Oncogene Tumor suppressor gene q23 Transcription factor Seq+ 53389 ChimerSeq STARFusion TCGA_RNA-Seq SPRED2-PELI1 SPRED2 chr2 65593724 - PELI1 chr2 64335513 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 CDS-5'UTR Intra-chr p14 p14 53390 ChimerSeq STARFusion TCGA_RNA-Seq TCEB2-DIP2A TCEB2 chr16 2826994 - DIP2A chr21 47983771 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 In-Frame Inter-chr q22.3 53391 ChimerSeq STARFusion TCGA_RNA-Seq TLDC1-PTP4A2 TLDC1 chr16 84538207 - PTP4A2 chr1 32377427 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 Out-of-frame Inter-chr q24.1 p35.2 53392 ChimerSeq STARFusion TCGA_RNA-Seq TNFSF10-ECHDC1 TNFSF10 chr3 172241043 - ECHDC1 chr6 127653012 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 CDS-5'UTR Inter-chr q26.31 q22.33 53393 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-OARD1 TPD52 chr8 81083660 - OARD1 chr6 41039414 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 Out-of-frame Inter-chr q21.13 p21.1 53394 ChimerSeq STARFusion TCGA_RNA-Seq TRADD-GNB1 TRADD chr16 67193741 - GNB1 chr1 1749314 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 5'UTR-CDS Inter-chr q22.1 p36.33 53395 ChimerSeq STARFusion TCGA_RNA-Seq TSC2-COX5B TSC2 chr16 2130378 + COX5B chr2 98263530 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene q11.2 53396 ChimerSeq STARFusion TCGA_RNA-Seq TSSC1-TRAPPC12 TSSC1 chr2 3381419 - TRAPPC12 chr2 3425652 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 In-Frame Intra-chr p25.3 53397 ChimerSeq STARFusion TCGA_RNA-Seq UBE2K-PDS5A UBE2K chr4 39776553 + PDS5A chr4 39827108 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 Out-of-frame Intra-chr p14 p14 53398 ChimerSeq STARFusion TCGA_RNA-Seq VEZT-CYSTM1 VEZT chr12 95611662 + CYSTM1 chr5 139622890 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 Out-of-frame Inter-chr q22 Tumor suppressor gene q31.3 53399 ChimerSeq STARFusion TCGA_RNA-Seq VMP1-SPIDR VMP1 chr17 57785109 + SPIDR chr8 48612965 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 Out-of-frame Inter-chr q23.1 q11.21 53400 ChimerSeq STARFusion TCGA_RNA-Seq VPS37C-DGAT2 VPS37C chr11 60928863 - DGAT2 chr11 75495663 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 5'UTR-CDS Intra-chr q12.2 q13.5 53401 ChimerSeq STARFusion TCGA_RNA-Seq WDR37-FAM65B WDR37 chr10 1123943 + FAM65B chr6 24848382 - Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 Out-of-frame Inter-chr p15.3 53402 ChimerSeq STARFusion TCGA_RNA-Seq ZSCAN30-IFT88 ZSCAN30 chr18 32843477 - IFT88 chr13 21230504 + Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 In-Frame Inter-chr q12.2 Transcription factor q12.11 Tumor suppressor gene 53403 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-HAUS8 CEACAM5 chr19 42233234 + HAUS8 chr19 17184668 - Exonic hg19 STAD TCGA-CG-4475-01A 14 1 Out-of-frame Intra-chr q13.2 p13.11 53404 ChimerSeq STARFusion TCGA_RNA-Seq CEACAM5-HAUS8 CEACAM5 chr19 42233228 + HAUS8 chr19 17184674 - Exonic hg19 STAD TCGA-CG-4475-01A 12 1 Out-of-frame Intra-chr q13.2 p13.11 53405 ChimerSeq STARFusion TCGA_RNA-Seq FAM192A-CCDC102A FAM192A chr16 57219733 - CCDC102A chr16 57555088 - Exonic hg19 STAD TCGA-CG-4475-01A 6 12 5'UTR-CDS Intra-chr q13 q21 Seq+ 53406 ChimerSeq STARFusion TCGA_RNA-Seq FAM192A-CCDC102A FAM192A chr16 57219943 - CCDC102A chr16 57555088 - Exonic hg19 STAD TCGA-CG-4475-01A 4 12 5'UTR-CDS Intra-chr q13 q21 Seq+ 53407 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-PPP1R9A FRS2 chr12 69864310 + PPP1R9A chr7 94903211 + Exonic hg19 STAD TCGA-CG-4475-01A 3 10 5'UTR-CDS Inter-chr q15 q21.3 Seq+ 53408 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125718 - CXCL16 chr17 4637332 - Exonic hg19 STAD TCGA-CG-4475-01A 4 5 Out-of-frame Inter-chr q12.2 p13.2 53409 ChimerSeq STARFusion TCGA_RNA-Seq ACLY-GHDC ACLY chr17 40086611 - GHDC chr17 40345868 - Exonic hg19 STAD TCGA-CG-4475-01A 3 2 5'UTR-5'UTR Intra-chr q21.2 q21.2 53410 ChimerSeq STARFusion TCGA_RNA-Seq FRS2-PTPRB FRS2 chr12 69864310 + PTPRB chr12 71003119 - Exonic hg19 STAD TCGA-CG-4475-01A 2 1 5'UTR-CDS Intra-chr q15 q15 Seq+ 53411 ChimerSeq STARFusion TCGA_RNA-Seq ULK1-SFSWAP ULK1 chr12 132380369 + SFSWAP chr12 132281723 + Exonic hg19 STAD TCGA-BR-7704-01A 147 34 Out-of-frame Intra-chr q24.33 Other:ULK q24.33 Seq+ 53412 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076852 + IGH@ chr14 106209410 - Exonic hg19 STAD TCGA-BR-7704-01A 11 0 Out-of-frame Inter-chr q21.2 32.33 53413 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076852 + IGHG1 chr14 106209410 - Exonic hg19 STAD TCGA-BR-7704-01A 11 0 Out-of-frame Inter-chr q21.2 q32.33 53414 ChimerSeq STARFusion TCGA_RNA-Seq MFSD8-HIPK2 MFSD8 chr4 128870959 - HIPK2 chr7 139305309 - Exonic hg19 STAD TCGA-BR-7704-01A 9 0 Out-of-frame Inter-chr q28.2 q34 CMGC:DYRK Tumor suppressor gene Seq+ 53415 ChimerSeq STARFusion TCGA_RNA-Seq RPS28-CD74 RPS28 chr19 8387249 + CD74 chr5 149792306 - Exonic hg19 STAD TCGA-BR-7704-01A 8 0 Out-of-frame Inter-chr p13.2 q33.1 53416 ChimerSeq STARFusion TCGA_RNA-Seq PTPRE-SH3PXD2A PTPRE chr10 129705573 + SH3PXD2A chr10 105561120 - Exonic hg19 STAD TCGA-IN-7806-01A 12 4 5'UTR-CDS Intra-chr q26.2 q24.33 Seq+ 53417 ChimerSeq STARFusion TCGA_RNA-Seq RPL13-MTATP8P1 RPL13 chr16 89629367 + MTATP8P1 chr1 568942 + Exonic hg19 STAD TCGA-IN-7806-01A 11 3 Out-of-frame Inter-chr q24.3 p36.33 53418 ChimerSeq STARFusion TCGA_RNA-Seq LIN28A-EXO1 LIN28A chr1 26755050 + EXO1 chr1 242055823 + Exonic hg19 TGCT TCGA-VF-A8A8 7 2 Out-of-frame Intra-chr p36.11 Transcription factor q43 53419 ChimerSeq STARFusion TCGA_RNA-Seq CACNA2D2-IGH@ CACNA2D2 chr3 50513565 - IGH@ chr14 106330059 - Exonic hg19 TGCT TCGA-WZ-A7V5 21 3 Out-of-frame Inter-chr p21.31 32.33 53420 ChimerSeq STARFusion TCGA_RNA-Seq CACNA2D2-IGH@ CACNA2D2 chr3 50513564 - IGH@ chr14 106331651 - Exonic hg19 TGCT TCGA-WZ-A7V5 14 3 Out-of-frame Inter-chr p21.31 32.33 53421 ChimerSeq STARFusion TCGA_RNA-Seq CACNA2D2-IGH@ CACNA2D2 chr3 50513564 - IGH@ chr14 106330459 - Exonic hg19 TGCT TCGA-WZ-A7V5 8 3 Out-of-frame Inter-chr p21.31 32.33 53422 ChimerSeq STARFusion TCGA_RNA-Seq ARID5A-IGH@ ARID5A chr2 97203189 + IGH@ chr14 106330466 - Exonic hg19 TGCT TCGA-WZ-A7V5 7 0 Out-of-frame Inter-chr q11.2 Transcription factor 32.33 53423 ChimerSeq STARFusion TCGA_RNA-Seq ARID5A-IGHJ4 ARID5A chr2 97203189 + IGHJ4 chr14 106330466 - Exonic hg19 TGCT TCGA-WZ-A7V5 7 0 Out-of-frame Inter-chr q11.2 Transcription factor Seq+ 53424 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-GNAS MIR302B chr4 113569810 - GNAS chr20 57470667 + Exonic hg19 TGCT TCGA-YU-A90P 16 4 5'UTR-5'UTR Inter-chr q25 Tumor suppressor gene q13.32 Oncogene 53425 ChimerSeq STARFusion TCGA_RNA-Seq URI1-KCNIP4 URI1 chr19 30477324 + KCNIP4 chr4 20852290 - Exonic hg19 TGCT TCGA-YU-A90P 8 6 In-Frame Inter-chr q12 p15.2 Seq+ 53426 ChimerSeq STARFusion TCGA_RNA-Seq FGD4-KIAA1551 FGD4 chr12 32751520 + KIAA1551 chr12 32140173 + Exonic hg19 TGCT TCGA-YU-A90Y 6 25 Out-of-frame Intra-chr p11.21 p11.21 Seq+ 53427 ChimerSeq STARFusion TCGA_RNA-Seq ZNF148-SLC12A8 ZNF148 chr3 125093946 - SLC12A8 chr3 124854626 - Exonic hg19 TGCT TCGA-2G-AAH4 6 22 5'UTR-CDS Intra-chr q21.2 Transcription factor q21.2 53428 ChimerSeq STARFusion TCGA_RNA-Seq WARS2-TBX15 WARS2 chr1 119584887 - TBX15 chr1 119474455 - Exonic hg19 TGCT TCGA-2G-AAH4 2 4 CDS-5'UTR Intra-chr p12 p12 Transcription factor 53429 ChimerSeq STARFusion TCGA_RNA-Seq LONP2-PLEKHB2 LONP2 chr16 48337216 + PLEKHB2 chr2 131878507 + Exonic hg19 TGCT TCGA-2G-AAH8 7 27 CDS-5'UTR Inter-chr q12.1 q21.1 Seq+ 53430 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-NME6 MAP4 chr3 48019355 - NME6 chr3 48338319 - Exonic hg19 TGCT TCGA-2G-AAH8 2 15 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 53431 ChimerSeq STARFusion TCGA_RNA-Seq ATXN3-MAML3 ATXN3 chr14 92537361 - MAML3 chr4 140810663 - Exonic hg19 TGCT TCGA-2G-AAHG 5 3 Out-of-frame Inter-chr q32.12 q31.1 53432 ChimerSeq STARFusion TCGA_RNA-Seq ESF1-RBM19 ESF1 chr20 13709025 - RBM19 chr12 114296701 - Exonic hg19 TGCT TCGA-4K-AA1G 3 7 Out-of-frame Inter-chr p12.1 q24.21 Seq+ 53433 ChimerSeq STARFusion TCGA_RNA-Seq GMCL1-DYSF GMCL1 chr2 70057284 + DYSF chr2 71708013 + Exonic hg19 TGCT TCGA-4K-AA1G 2 2 Out-of-frame Intra-chr p13.3 p13.2 Seq+ 53434 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHGP STK25 chr2 242434915 - IGHGP chr14 106136184 - Exonic hg19 TGCT TCGA-4K-AA1H 20 1 Out-of-frame Inter-chr q37.3 53435 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHGP STK25 chr2 242434915 - IGHGP chr14 106209410 - Exonic hg19 TGCT TCGA-4K-AA1H 7 1 Out-of-frame Inter-chr q37.3 53436 ChimerSeq STARFusion TCGA_RNA-Seq STAM2-IGKC STAM2 chr2 153001435 - IGKC chr2 89161075 - Exonic hg19 TGCT TCGA-XY-A9T9 13 1 Out-of-frame Intra-chr q23.3 p11.2 53437 ChimerSeq STARFusion TCGA_RNA-Seq STAM2-IGKJ2 STAM2 chr2 153001435 - IGKJ2 chr2 89161075 - Exonic hg19 TGCT TCGA-XY-A9T9 13 1 Out-of-frame Intra-chr q23.3 p11.2 53438 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-LY6E IGH@ chr14 106452668 - LY6E chr8 144099952 + Exonic hg19 TGCT TCGA-XY-A9T9 4 3 Out-of-frame Inter-chr 32.33 53439 ChimerSeq STARFusion TCGA_RNA-Seq RNU6ATAC-SNORD3C RNU6ATAC chr9 137029562 - SNORD3C chr17 19093488 - Exonic hg19 TGCT TCGA-2G-AAHP 4 5 Out-of-frame Inter-chr q34.2 p11.2 53440 ChimerSeq STARFusion TCGA_RNA-Seq MAD1L1-EIF3B MAD1L1 chr7 2054137 - EIF3B chr7 2418324 + Exonic hg19 TGCT TCGA-WZ-A8D5 2 6 In-Frame Intra-chr p22.3 Tumor suppressor gene p22.3 53441 ChimerSeq STARFusion TCGA_RNA-Seq COASY-IGHG3 COASY chr17 40714608 + IGHG3 chr14 106237745 - Exonic hg19 TGCT TCGA-XY-A89B 18 1 Out-of-frame Inter-chr q21.2 53442 ChimerSeq STARFusion TCGA_RNA-Seq RNF213-CEP104 RNF213 chr17 78337114 + CEP104 chr1 3732934 - Exonic hg19 TGCT TCGA-VF-A8AE 2 11 In-Frame Inter-chr q25.3 Oncogene p36.32 Seq+ 53443 ChimerSeq STARFusion TCGA_RNA-Seq CBWD1-NPSR1 CBWD1 chr9 134979 - NPSR1 chr7 34818074 + Exonic hg19 TGCT TCGA-VF-A8AE 2 4 Out-of-frame Inter-chr p24.3 p14.3 53444 ChimerSeq STARFusion TCGA_RNA-Seq GPR148-IGL@ GPR148 chr2 131486830 + IGL@ chr22 23241800 + Exonic hg19 TGCT TCGA-VF-A8AA 39 0 Out-of-frame Inter-chr q21.1 q11.22 53445 ChimerSeq STARFusion TCGA_RNA-Seq GPR148-IGLC2 GPR148 chr2 131486830 + IGLC2 chr22 23241800 + Exonic hg19 TGCT TCGA-VF-A8AA 39 0 Out-of-frame Inter-chr q21.1 q11.22 53446 ChimerSeq STARFusion TCGA_RNA-Seq GPR148-IGLJ2 GPR148 chr2 131486830 + IGLJ2 chr22 23241800 + Exonic hg19 TGCT TCGA-VF-A8AA 39 0 Out-of-frame Inter-chr q21.1 q11.22 53447 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-DEFB123 TPX2 chr20 30330450 + DEFB123 chr20 30037832 + Exonic hg19 TGCT TCGA-VF-A8AA 8 88 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 53448 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P2 FTL chr19 49469056 + FTH1P2 chr1 228823167 + Exonic hg19 TGCT TCGA-VF-A8AB 3 11 Out-of-frame Inter-chr q13.33 q42.13 53449 ChimerSeq STARFusion TCGA_RNA-Seq LRP6-LRRC23 LRP6 chr12 12397196 - LRRC23 chr12 7014749 + Exonic hg19 TGCT TCGA-S6-A8JY 20 64 CDS-5'UTR Intra-chr p13.31 Seq+ 53450 ChimerSeq STARFusion TCGA_RNA-Seq LRP6-LRRC23 LRP6 chr12 12397196 - LRRC23 chr12 7013796 + Exonic hg19 TGCT TCGA-S6-A8JY 7 64 CDS-5'UTR Intra-chr p13.31 Seq+ 53451 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525073 - IGHG1 chr14 106209411 - Exonic hg19 TGCT TCGA-S6-A8JW 7 0 Out-of-frame Inter-chr q34 Oncogene q32.33 53452 ChimerSeq STARFusion TCGA_RNA-Seq FXR2-TP53 FXR2 chr17 7504727 - TP53 chr17 7577608 - Exonic hg19 TGCT TCGA-YU-AA61 2 29 In-Frame Intra-chr p13.1 p13.1 Oncogene Tumor suppressor gene Transcription factor Seq+ 53453 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-GNAS MIR302B chr4 113569810 - GNAS chr20 57470667 + Exonic hg19 TGCT TCGA-2G-AAKM 14 1 5'UTR-5'UTR Inter-chr q25 Tumor suppressor gene q13.32 Oncogene 53454 ChimerSeq STARFusion TCGA_RNA-Seq DPPA5-KHDC3L DPPA5 chr6 74063576 - KHDC3L chr6 74072440 + Exonic hg19 TGCT TCGA-2G-AAKM 5 7 Out-of-frame Intra-chr q13 q13 Seq+ 53455 ChimerSeq STARFusion TCGA_RNA-Seq CANX-RUFY1 CANX chr5 179137066 + RUFY1 chr5 179036377 + Exonic hg19 TGCT TCGA-2G-AAKM 3 6 Out-of-frame Intra-chr 53456 ChimerSeq STARFusion TCGA_RNA-Seq BPTF-NOL11 BPTF chr17 65944422 + NOL11 chr17 65715790 + Exonic hg19 TGCT TCGA-2G-AAKL 9 26 In-Frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 53457 ChimerSeq STARFusion TCGA_RNA-Seq LRWD1-IGH@ LRWD1 chr7 102112337 + IGH@ chr14 106330470 - Exonic hg19 TGCT TCGA-2G-AAKO 11 2 Out-of-frame Inter-chr q22.1 32.33 53458 ChimerSeq STARFusion TCGA_RNA-Seq LRWD1-IGHG3 LRWD1 chr7 102112337 + IGHG3 chr14 106330470 - Exonic hg19 TGCT TCGA-2G-AAKO 11 1 Out-of-frame Inter-chr q22.1 53459 ChimerSeq STARFusion TCGA_RNA-Seq C22orf39-IGHGP C22orf39 chr22 19344505 - IGHGP chr14 106136183 - Exonic hg19 TGCT TCGA-2G-AAKO 9 1 Out-of-frame Inter-chr q11.21 53460 ChimerSeq STARFusion TCGA_RNA-Seq HIRA-IGHGP HIRA chr22 19344505 - IGHGP chr14 106136183 - Exonic hg19 TGCT TCGA-2G-AAKO 9 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 53461 ChimerSeq STARFusion TCGA_RNA-Seq NDRG2-IGH@ NDRG2 chr14 21486213 - IGH@ chr14 106237738 - Exonic hg19 TGCT TCGA-2G-AAKO 8 1 Out-of-frame Intra-chr q11.2 Tumor suppressor gene 32.33 53462 ChimerSeq STARFusion TCGA_RNA-Seq NDRG2-IGHG1 NDRG2 chr14 21486213 - IGHG1 chr14 106237738 - Exonic hg19 TGCT TCGA-2G-AAKO 8 1 Out-of-frame Intra-chr q11.2 Tumor suppressor gene q32.33 53463 ChimerSeq STARFusion TCGA_RNA-Seq PPFIBP1-SLCO1B1 PPFIBP1 chr12 27677298 + SLCO1B1 chr12 21294448 + Exonic hg19 TGCT TCGA-2G-AAKH 17 36 5'UTR-5'UTR Intra-chr p11.23 p12.1 Seq+ 53464 ChimerSeq STARFusion TCGA_RNA-Seq TMEM120B-IGH@ TMEM120B chr12 122213674 + IGH@ chr14 106331457 - Exonic hg19 TGCT TCGA-2G-AAKH 16 1 Out-of-frame Inter-chr q24.31 32.33 53465 ChimerSeq STARFusion TCGA_RNA-Seq TMEM120B-IGHG3 TMEM120B chr12 122213674 + IGHG3 chr14 106331457 - Exonic hg19 TGCT TCGA-2G-AAKH 16 1 Out-of-frame Inter-chr q24.31 53466 ChimerSeq STARFusion TCGA_RNA-Seq FAF1-IGH@ FAF1 chr1 51121133 - IGH@ chr14 106330066 - Exonic hg19 TGCT TCGA-2G-AAKH 6 1 Out-of-frame Inter-chr p32.3 32.33 53467 ChimerSeq STARFusion TCGA_RNA-Seq DOCK6-TMEM205 DOCK6 chr19 11352721 - TMEM205 chr19 11456304 - Exonic hg19 TGCT TCGA-2G-AAKH 5 3 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 53468 ChimerSeq STARFusion TCGA_RNA-Seq AP5Z1-IGH@ AP5Z1 chr7 4828395 + IGH@ chr14 106351918 - Exonic hg19 TGCT TCGA-XE-AAOB 17 3 Out-of-frame Inter-chr p22.1 32.33 53469 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-HIVEP3 IGH@ chr14 106805213 - HIVEP3 chr1 41974566 - Exonic hg19 TGCT TCGA-XE-AAOB 7 1 Out-of-frame Inter-chr 32.33 p34.2 Tumor suppressor gene Transcription factor 53470 ChimerSeq STARFusion TCGA_RNA-Seq BICD1-LOH12CR1 BICD1 chr12 32260478 + LOH12CR1 chr12 12588562 + Exonic hg19 TGCT TCGA-2G-AAKD 10 37 Out-of-frame Intra-chr p11.21 Seq+ 53471 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-PANK2 MIR302B chr4 113569810 - PANK2 chr20 3899318 + Exonic hg19 TGCT TCGA-2G-AAKD 4 0 5'UTR-CDS Inter-chr q25 Tumor suppressor gene p13 53472 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-GNAS MIR302B chr4 113569810 - GNAS chr20 57470667 + Exonic hg19 TGCT TCGA-2G-AAKD 3 1 5'UTR-5'UTR Inter-chr q25 Tumor suppressor gene q13.32 Oncogene 53473 ChimerSeq STARFusion TCGA_RNA-Seq FAM156A-XAGE3 FAM156A chrX 53024485 - XAGE3 chrX 52896172 - Exonic hg19 TGCT TCGA-2G-AAKG 2 2 5'UTR-5'UTR Intra-chr p11.22 p11.22 53474 ChimerSeq STARFusion TCGA_RNA-Seq FAM156A-XAGE3 FAM156A chrX 53024594 - XAGE3 chrX 52896172 - Exonic hg19 TGCT TCGA-2G-AAKG 2 2 5'UTR-5'UTR Intra-chr p11.22 p11.22 53475 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-GLYAT FCHSD2 chr11 72712035 - GLYAT chr11 58491984 - Exonic hg19 TGCT TCGA-SB-A76C 11 22 CDS-5'UTR Intra-chr q13.4 q12.1 Seq+ 53476 ChimerSeq STARFusion TCGA_RNA-Seq ZNF684-EIF2B3 ZNF684 chr1 40998853 + EIF2B3 chr1 45316675 - Exonic hg19 TGCT TCGA-XY-A8S2 11 9 Out-of-frame Intra-chr p34.2 Transcription factor p34.1 Seq+ 53477 ChimerSeq STARFusion TCGA_RNA-Seq FOXJ3-HIVEP3 FOXJ3 chr1 42776721 - HIVEP3 chr1 42314706 - Exonic hg19 TGCT TCGA-XY-A8S2 7 21 CDS-5'UTR Intra-chr p34.2 Transcription factor p34.2 Tumor suppressor gene Transcription factor Seq+ 53478 ChimerSeq STARFusion TCGA_RNA-Seq FOXJ3-HIVEP3 FOXJ3 chr1 42776721 - HIVEP3 chr1 42335301 - Exonic hg19 TGCT TCGA-XY-A8S2 2 21 CDS-5'UTR Intra-chr p34.2 Transcription factor p34.2 Tumor suppressor gene Transcription factor Seq+ 53479 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-GNAS MIR302B chr4 113569810 - GNAS chr20 57470667 + Exonic hg19 TGCT TCGA-XY-A8S2 7 0 5'UTR-5'UTR Inter-chr q25 Tumor suppressor gene q13.32 Oncogene 53480 ChimerSeq STARFusion TCGA_RNA-Seq LIN28A-EXO1 LIN28A chr1 26755050 + EXO1 chr1 242055823 + Exonic hg19 TGCT TCGA-XY-A8S2 5 2 Out-of-frame Intra-chr p36.11 Transcription factor q43 53481 ChimerSeq STARFusion TCGA_RNA-Seq EFCAB14-L1TD1 EFCAB14 chr1 47152456 - L1TD1 chr1 62662107 + Exonic hg19 TGCT TCGA-XY-A8S2 3 5 Out-of-frame Intra-chr p33 p31.3 53482 ChimerSeq STARFusion TCGA_RNA-Seq LIN28A-EXO1 LIN28A chr1 26755050 + EXO1 chr1 242055823 + Exonic hg19 TGCT TCGA-XY-A8S3 13 1 Out-of-frame Intra-chr p36.11 Transcription factor q43 53483 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-GNAS MIR302B chr4 113569810 - GNAS chr20 57470667 + Exonic hg19 TGCT TCGA-XY-A8S3 12 0 5'UTR-5'UTR Inter-chr q25 Tumor suppressor gene q13.32 Oncogene 53484 ChimerSeq STARFusion TCGA_RNA-Seq CRKL-FRG1 CRKL chr22 21288532 + FRG1 chr4 190881903 + Exonic hg19 TGCT TCGA-XY-A8S3 5 5 In-Frame Inter-chr q11.21 Oncogene 53485 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106209410 - Exonic hg19 TGCT TCGA-X3-A8G4 8 1 Out-of-frame Inter-chr q24.2 32.33 53486 ChimerSeq STARFusion TCGA_RNA-Seq VPS52-IGL@ VPS52 chr6 33232411 - IGL@ chr22 23241801 + Exonic hg19 TGCT TCGA-ZM-AA0H 75 0 Out-of-frame Inter-chr q11.22 53487 ChimerSeq STARFusion TCGA_RNA-Seq VPS52-IGLJ2 VPS52 chr6 33232411 - IGLJ2 chr22 23241801 + Exonic hg19 TGCT TCGA-ZM-AA0H 75 0 Out-of-frame Inter-chr q11.22 53488 ChimerSeq STARFusion TCGA_RNA-Seq VPS52-IGL@ VPS52 chr6 33232411 - IGL@ chr22 23247171 + Exonic hg19 TGCT TCGA-ZM-AA0H 73 0 Out-of-frame Inter-chr q11.22 53489 ChimerSeq STARFusion TCGA_RNA-Seq VPS52-IGLC3 VPS52 chr6 33232411 - IGLC3 chr22 23241801 + Exonic hg19 TGCT TCGA-ZM-AA0H 49 0 Out-of-frame Inter-chr q11.22 53490 ChimerSeq STARFusion TCGA_RNA-Seq VPS52-IGLC3 VPS52 chr6 33232411 - IGLC3 chr22 23247171 + Exonic hg19 TGCT TCGA-ZM-AA0H 14 0 Out-of-frame Inter-chr q11.22 53491 ChimerSeq STARFusion TCGA_RNA-Seq NET1-RIMKLB NET1 chr10 5471192 + RIMKLB chr12 8925917 + Exonic hg19 TGCT TCGA-YU-A94I 10 29 Out-of-frame Inter-chr p15.1 p13.31 Seq+ 53492 ChimerSeq STARFusion TCGA_RNA-Seq PTK7-CUL9 PTK7 chr6 43044305 + CUL9 chr6 43160739 + Exonic hg19 TGCT TCGA-YU-A94I 5 18 Out-of-frame Intra-chr p21.1 p21.1 53493 ChimerSeq STARFusion TCGA_RNA-Seq PI4KB-CDC42SE1 PI4KB chr1 151276017 - CDC42SE1 chr1 151032249 - Exonic hg19 TGCT TCGA-YU-A94I 7 6 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 53494 ChimerSeq STARFusion TCGA_RNA-Seq AKAP13-PDE8A AKAP13 chr15 85924029 + PDE8A chr15 85607601 + Exonic hg19 TGCT TCGA-YU-A94I 2 9 5'UTR-5'UTR Intra-chr q25.3 q25.3 Pub 53495 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-AR IGL@ chr22 23243605 + AR chrX 66764976 + Exonic hg19 TGCT TCGA-ZM-AA0F 7 0 Out-of-frame Inter-chr q11.22 q12 Oncogene Tumor suppressor gene Transcription factor 53496 ChimerSeq STARFusion TCGA_RNA-Seq IGLC2-AR IGLC2 chr22 23248961 + AR chrX 66764976 + Exonic hg19 TGCT TCGA-ZM-AA0F 7 0 Out-of-frame Inter-chr q11.22 q12 Oncogene Tumor suppressor gene Transcription factor 53497 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CCDC88C IGH@ chr14 107083256 - CCDC88C chr14 91808621 - Exonic hg19 TGCT TCGA-SN-A6IS 18 1 Out-of-frame Intra-chr 32.33 q32.12 53498 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-CCDC88C IGH@ chr14 107095126 - CCDC88C chr14 91808621 - Exonic hg19 TGCT TCGA-SN-A6IS 14 1 Out-of-frame Intra-chr 32.33 q32.12 53499 ChimerSeq STARFusion TCGA_RNA-Seq CRELD1-FANCD2OS CRELD1 chr3 9979790 + FANCD2OS chr3 10123215 - Exonic hg19 TGCT TCGA-SN-A6IS 4 30 Out-of-frame Intra-chr p25.3 p25.3 Seq+ 53500 ChimerSeq STARFusion TCGA_RNA-Seq CRELD1-FANCD2OS CRELD1 chr3 9976601 + FANCD2OS chr3 10123215 - Exonic hg19 TGCT TCGA-SN-A6IS 3 29 Out-of-frame Intra-chr p25.3 p25.3 Seq+ 53501 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-TENM4 MAP4 chr3 47956307 - TENM4 chr11 78781054 - Exonic hg19 TGCT TCGA-XE-AANJ 11 35 Out-of-frame Inter-chr p21.31 q14.1 Seq+ 53502 ChimerSeq STARFusion TCGA_RNA-Seq SAFB-IGKC SAFB chr19 5650000 + IGKC chr2 89161070 - Exonic hg19 TGCT TCGA-XE-AANJ 15 1 Out-of-frame Inter-chr p13.3 Tumor suppressor gene Transcription factor p11.2 53503 ChimerSeq STARFusion TCGA_RNA-Seq LRP6-MANSC1 LRP6 chr12 12397196 - MANSC1 chr12 12496348 - Exonic hg19 TGCT TCGA-XE-AANI 8 34 CDS-5'UTR Intra-chr Seq+ 53504 ChimerSeq STARFusion TCGA_RNA-Seq RBM3-COL1A1 RBM3 chrX 48434090 + COL1A1 chr17 48264909 - Exonic hg19 TGCT TCGA-XE-AANI 9 1 Out-of-frame Inter-chr p11.23 q21.33 Oncogene 53505 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-COL1A1 SEPT9 chr17 75471345 + COL1A1 chr17 48265510 - Exonic hg19 TGCT TCGA-XE-AANI 6 6 5'UTR-CDS Intra-chr q21.33 Oncogene 53506 ChimerSeq STARFusion TCGA_RNA-Seq KDM2B-ORAI1 KDM2B chr12 122012452 - ORAI1 chr12 122078947 + Exonic hg19 TGCT TCGA-2G-AAL5 4 7 Out-of-frame Intra-chr q24.31 Transcription factor q24.31 Seq+ 53507 ChimerSeq STARFusion TCGA_RNA-Seq TOMM7-STEAP1B TOMM7 chr7 22857619 - STEAP1B chr7 22672541 - Exonic hg19 TGCT TCGA-2G-AAL5 3 5 CDS-5'UTR Intra-chr p15.3 p15.3 53508 ChimerSeq STARFusion TCGA_RNA-Seq JARID2-NUDC JARID2 chr6 15246815 + NUDC chr1 27250580 + Exonic hg19 TGCT TCGA-2G-AAL7 475 1188 In-Frame Inter-chr p22.3 p36.11 Seq+ 53509 ChimerSeq STARFusion TCGA_RNA-Seq RIPK1-SERPINB9 RIPK1 chr6 3064293 + SERPINB9 chr6 2900855 - Exonic hg19 TGCT TCGA-2G-AAL7 10 2 5'UTR-5'UTR Intra-chr p25.2 TKL:RIPK p25.2 53510 ChimerSeq STARFusion TCGA_RNA-Seq LIN28A-EXO1 LIN28A chr1 26755049 + EXO1 chr1 242055823 + Exonic hg19 TGCT TCGA-2G-AAL7 5 1 Out-of-frame Intra-chr p36.11 Transcription factor q43 53511 ChimerSeq STARFusion TCGA_RNA-Seq SOS1-MAP4K3 SOS1 chr2 39278285 - MAP4K3 chr2 39605264 - Exonic hg19 TGCT TCGA-XE-AANR 2 3 In-Frame Intra-chr p22.1 p22.1 Seq+ 53512 ChimerSeq STARFusion TCGA_RNA-Seq EOGT-IGH@ EOGT chr3 69062755 - IGH@ chr14 106237735 - Exonic hg19 TGCT TCGA-XE-AANV 9 1 Out-of-frame Inter-chr p14.1 32.33 53513 ChimerSeq STARFusion TCGA_RNA-Seq EOGT-IGH@ EOGT chr3 69062755 - IGH@ chr14 106209400 - Exonic hg19 TGCT TCGA-XE-AANV 7 1 Out-of-frame Inter-chr p14.1 32.33 53514 ChimerSeq STARFusion TCGA_RNA-Seq EOGT-IGHG1 EOGT chr3 69062755 - IGHG1 chr14 106209400 - Exonic hg19 TGCT TCGA-XE-AANV 7 1 Out-of-frame Inter-chr p14.1 q32.33 53515 ChimerSeq STARFusion TCGA_RNA-Seq EOGT-IGHG1 EOGT chr3 69062755 - IGHG1 chr14 106237735 - Exonic hg19 TGCT TCGA-XE-AANV 6 1 Out-of-frame Inter-chr p14.1 q32.33 53516 ChimerSeq STARFusion TCGA_RNA-Seq GRB2-CASKIN2 GRB2 chr17 73389632 - CASKIN2 chr17 73502010 - Exonic hg19 TGCT TCGA-W4-A7U3 7 9 In-Frame Intra-chr q25.1 q25.1 53517 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-MAPKBP1 IGH@ chr14 106452676 - MAPKBP1 chr15 42067108 + Exonic hg19 TGCT TCGA-W4-A7U3 6 1 Out-of-frame Inter-chr 32.33 q15.1 53518 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-GNAS MIR302B chr4 113569810 - GNAS chr20 57470667 + Exonic hg19 TGCT TCGA-2G-AALY 12 3 5'UTR-5'UTR Inter-chr q25 Tumor suppressor gene q13.32 Oncogene 53519 ChimerSeq STARFusion TCGA_RNA-Seq LIN28A-EXO1 LIN28A chr1 26755050 + EXO1 chr1 242055823 + Exonic hg19 TGCT TCGA-2G-AALY 6 1 Out-of-frame Intra-chr p36.11 Transcription factor q43 53520 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-ABHD12B MIR302B chr4 113569810 - ABHD12B chr14 51368547 + Exonic hg19 TGCT TCGA-2G-AALY 5 0 5'UTR-CDS Inter-chr q25 Tumor suppressor gene q22.1 53521 ChimerSeq STARFusion TCGA_RNA-Seq SLMAP-IGH@ SLMAP chr3 57742829 + IGH@ chr14 106209409 - Exonic hg19 TGCT TCGA-SO-A8JP 16 1 Out-of-frame Inter-chr p14.3 32.33 53522 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-GNAS MIR302B chr4 113569810 - GNAS chr20 57470667 + Exonic hg19 TGCT TCGA-2G-AALP 10 1 5'UTR-5'UTR Inter-chr q25 Tumor suppressor gene q13.32 Oncogene 53523 ChimerSeq STARFusion TCGA_RNA-Seq SNX8-MAD1L1 SNX8 chr7 2353963 - MAD1L1 chr7 2108973 - Exonic hg19 TGCT TCGA-2G-AALP 6 4 Out-of-frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 53524 ChimerSeq STARFusion TCGA_RNA-Seq PABPC1P5-IGH@ PABPC1P5 chrY 13492156 + IGH@ chr14 106330472 - Exonic hg19 TGCT TCGA-2G-AALS 21 0 Out-of-frame Inter-chr 32.33 53525 ChimerSeq STARFusion TCGA_RNA-Seq PABPC1P5-IGHG3 PABPC1P5 chrY 13492156 + IGHG3 chr14 106330472 - Exonic hg19 TGCT TCGA-2G-AALS 21 0 Out-of-frame Inter-chr 53526 ChimerSeq STARFusion TCGA_RNA-Seq PABPC1P5-IGHJ4 PABPC1P5 chrY 13492156 + IGHJ4 chr14 106330472 - Exonic hg19 TGCT TCGA-2G-AALS 21 0 Out-of-frame Inter-chr 53527 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB2-IGKC DNAJB2 chr2 220151425 + IGKC chr2 89156807 - Exonic hg19 TGCT TCGA-2G-AALS 4 1 Out-of-frame Intra-chr q35 p11.2 53528 ChimerSeq STARFusion TCGA_RNA-Seq DTNBP1-PITPNC1 DTNBP1 chr6 15663045 - PITPNC1 chr17 65665624 + Exonic hg19 TGCT TCGA-2G-AALW 7 17 Out-of-frame Inter-chr p22.3 q24.2 Seq+ 53529 ChimerSeq STARFusion TCGA_RNA-Seq TJP2-FXN TJP2 chr9 71766687 + FXN chr9 71714817 + Exonic hg19 TGCT TCGA-2G-AALW 2 3 5'UTR-CDS Intra-chr q21.11 q21.11 Tumor suppressor gene Seq+ 53530 ChimerSeq STARFusion TCGA_RNA-Seq VEZT-FGD6 VEZT chr12 95611662 + FGD6 chr12 95502337 - Exonic hg19 TGCT TCGA-WZ-A7V3 14 12 Out-of-frame Intra-chr q22 Tumor suppressor gene q22 Seq+ 53531 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-RPL38 IGH@ chr14 106733151 - RPL38 chr17 72200264 + Exonic hg19 TGCT TCGA-WZ-A7V3 11 3 Out-of-frame Inter-chr 32.33 q25.1 53532 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-AR IGL@ chr22 23248962 + AR chrX 66764977 + Exonic hg19 TGCT TCGA-WZ-A7V3 11 1 Out-of-frame Inter-chr q11.22 q12 Oncogene Tumor suppressor gene Transcription factor 53533 ChimerSeq STARFusion TCGA_RNA-Seq PCLO-PHTF2 PCLO chr7 82763566 - PHTF2 chr7 77530028 + Exonic hg19 TGCT TCGA-WZ-A7V3 8 4 In-Frame Intra-chr q21.11 q11.23 Seq+ 53534 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-LGALS7B ACTN4 chr19 39138547 + LGALS7B chr19 39281329 + Exonic hg19 TGCT TCGA-2G-AALO 5 13 Out-of-frame Intra-chr Seq+ 53535 ChimerSeq STARFusion TCGA_RNA-Seq XBP1-TTC28 XBP1 chr22 29195045 - TTC28 chr22 29025818 - Exonic hg19 TGCT TCGA-4K-AAAL 3 4 In-Frame Intra-chr q12.1 Transcription factor q12.1 Seq+ 53536 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R5A-SPATA17 PPP2R5A chr1 212522584 + SPATA17 chr1 218040220 + Exonic hg19 TGCT TCGA-2G-AALF 7 22 CDS-3'UTR Intra-chr q32.3 q41 Seq+ 53537 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-HNRNPU IGH@ chr14 106725199 - HNRNPU chr1 245026256 - Exonic hg19 TGCT TCGA-2G-AALF 6 1 Out-of-frame Inter-chr 32.33 q44 53538 ChimerSeq STARFusion TCGA_RNA-Seq LRRC56-DEAF1 LRRC56 chr11 549998 + DEAF1 chr11 679816 - Exonic hg19 TGCT TCGA-2G-AAM3 3 2 Out-of-frame Intra-chr p15.5 Transcription factor Seq+ 53539 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-GNAS MIR302B chr4 113569810 - GNAS chr20 57470667 + Exonic hg19 TGCT TCGA-2G-AAM2 36 0 5'UTR-5'UTR Inter-chr q25 Tumor suppressor gene q13.32 Oncogene 53540 ChimerSeq STARFusion TCGA_RNA-Seq FBLIM1-DDI2 FBLIM1 chr1 16085343 + DDI2 chr1 15986332 + Exonic hg19 TGCT TCGA-2G-AAM2 2 7 5'UTR-3'UTR Intra-chr p36.21 p36.21 Seq+ 53541 ChimerSeq STARFusion TCGA_RNA-Seq HIST1H2AH-IGH@ HIST1H2AH chr6 27114997 + IGH@ chr14 106330466 - Exonic hg19 TGCT TCGA-2G-AAEX 17 0 Out-of-frame Inter-chr p22.1 32.33 53542 ChimerSeq STARFusion TCGA_RNA-Seq HIST1H2AH-IGHG3 HIST1H2AH chr6 27114997 + IGHG3 chr14 106330466 - Exonic hg19 TGCT TCGA-2G-AAEX 17 0 Out-of-frame Inter-chr p22.1 53543 ChimerSeq STARFusion TCGA_RNA-Seq HIST1H2AH-IGHJ4 HIST1H2AH chr6 27114997 + IGHJ4 chr14 106330466 - Exonic hg19 TGCT TCGA-2G-AAEX 17 0 Out-of-frame Inter-chr p22.1 53544 ChimerSeq STARFusion TCGA_RNA-Seq PLCXD1-IGHG3 PLCXD1 chrX 209756 + IGHG3 chr14 106237745 - Exonic hg19 TGCT TCGA-2G-AAEX 11 0 Out-of-frame Inter-chr p22.33 53545 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-GNAS MIR302B chr4 113569810 - GNAS chr20 57470667 + Exonic hg19 TGCT TCGA-2G-AAM4 36 3 5'UTR-5'UTR Inter-chr q25 Tumor suppressor gene q13.32 Oncogene 53546 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-FKBP8 MIR302B chr4 113569810 - FKBP8 chr19 18652805 - Exonic hg19 TGCT TCGA-2G-AAM4 11 0 5'UTR-5'UTR Inter-chr q25 Tumor suppressor gene p13.11 53547 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-EEF1D MIR302B chr4 113569810 - EEF1D chr8 144669022 - Exonic hg19 TGCT TCGA-2G-AAM4 10 1 5'UTR-5'UTR Inter-chr q25 Tumor suppressor gene 53548 ChimerSeq STARFusion TCGA_RNA-Seq NOL8-FXN NOL8 chr9 95076549 - FXN chr9 71661301 + Exonic hg19 TGCT TCGA-2G-AAM4 2 10 In-Frame Intra-chr q22.31 q21.11 Tumor suppressor gene Seq+ 53549 ChimerSeq STARFusion TCGA_RNA-Seq ITGA9-ZNF48 ITGA9 chr3 37584076 + ZNF48 chr16 30407101 + Exonic hg19 TGCT TCGA-YU-AA4L 3 15 CDS-5'UTR Inter-chr p22.2 Oncogene p11.2 Transcription factor Seq+ 53550 ChimerSeq STARFusion TCGA_RNA-Seq C2orf44-SF3B14 C2orf44 chr2 24253933 - SF3B14 chr2 24291329 - Exonic hg19 TGCT TCGA-YU-AA4L 4 7 Out-of-frame Intra-chr 53551 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-PANK2 MIR302B chr4 113569810 - PANK2 chr20 3899318 + Exonic hg19 TGCT TCGA-YU-AA4L 5 0 5'UTR-CDS Inter-chr q25 Tumor suppressor gene p13 53552 ChimerSeq STARFusion TCGA_RNA-Seq C1QC-CACNB3 C1QC chr1 22974548 + CACNB3 chr12 49218616 + Exonic hg19 TGCT TCGA-ZM-AA05 4 0 Out-of-frame Inter-chr p36.12 q13.12 53553 ChimerSeq STARFusion TCGA_RNA-Seq BRI3-IGL@ BRI3 chr7 97935808 + IGL@ chr22 23247173 + Exonic hg19 TGCT TCGA-2G-AAGI 12 1 Out-of-frame Inter-chr q21.3 q11.22 53554 ChimerSeq STARFusion TCGA_RNA-Seq BRI3-IGLC3 BRI3 chr7 97935808 + IGLC3 chr22 23247173 + Exonic hg19 TGCT TCGA-2G-AAGI 12 1 Out-of-frame Inter-chr q21.3 q11.22 53555 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-HCFC1 IGL@ chr22 23223569 + HCFC1 chrX 153236156 - Exonic hg19 TGCT TCGA-2G-AAGI 11 2 Out-of-frame Inter-chr q11.22 q28 53556 ChimerSeq STARFusion TCGA_RNA-Seq LIN28A-EXO1 LIN28A chr1 26755050 + EXO1 chr1 242055823 + Exonic hg19 TGCT TCGA-2G-AAGK 10 1 Out-of-frame Intra-chr p36.11 Transcription factor q43 53557 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-GNAS MIR302B chr4 113569810 - GNAS chr20 57470667 + Exonic hg19 TGCT TCGA-2G-AAGK 7 4 5'UTR-5'UTR Inter-chr q25 Tumor suppressor gene q13.32 Oncogene 53558 ChimerSeq STARFusion TCGA_RNA-Seq SP6-IGKC SP6 chr17 45924405 - IGKC chr2 89160432 - Exonic hg19 TGCT TCGA-2G-AAGJ 300 0 Out-of-frame Inter-chr q21.32 Transcription factor p11.2 53559 ChimerSeq STARFusion TCGA_RNA-Seq SP6-IGKJ4 SP6 chr17 45924405 - IGKJ4 chr2 89160432 - Exonic hg19 TGCT TCGA-2G-AAGJ 300 0 Out-of-frame Inter-chr q21.32 Transcription factor p11.2 Seq+ 53560 ChimerSeq STARFusion TCGA_RNA-Seq SIL1-CTNNA1 SIL1 chr5 138283094 - CTNNA1 chr5 138253431 + Exonic hg19 TGCT TCGA-2G-AAGM 12 76 In-Frame Intra-chr q31.2 q31.2 Oncogene Seq+ 53561 ChimerSeq STARFusion TCGA_RNA-Seq LIN28A-EXO1 LIN28A chr1 26843881 + EXO1 chr1 242055823 + Exonic hg19 TGCT TCGA-2G-AAGN 5 1 Out-of-frame Intra-chr p36.11 Transcription factor q43 53562 ChimerSeq STARFusion TCGA_RNA-Seq EDC3-SLC6A11 EDC3 chr15 74948074 - SLC6A11 chr3 10967690 + Exonic hg19 TGCT TCGA-2G-AAGA 8 23 In-Frame Inter-chr q24.1 p25.3 Seq+ 53563 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-GNAS MIR302B chr4 113569810 - GNAS chr20 57470667 + Exonic hg19 TGCT TCGA-2G-AAGA 11 3 5'UTR-5'UTR Inter-chr q25 Tumor suppressor gene q13.32 Oncogene 53564 ChimerSeq STARFusion TCGA_RNA-Seq RAB3GAP1-ACMSD RAB3GAP1 chr2 135815656 + ACMSD chr2 135655911 + Exonic hg19 TGCT TCGA-2G-AAGA 6 21 In-Frame Intra-chr q21.3 q21.3 Seq+ 53565 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-GNAS MIR302B chr4 113569810 - GNAS chr20 57470667 + Exonic hg19 TGCT TCGA-2G-AAGC 9 2 5'UTR-5'UTR Inter-chr q25 Tumor suppressor gene q13.32 Oncogene 53566 ChimerSeq STARFusion TCGA_RNA-Seq RCOR1-EMC3 RCOR1 chr14 103059662 + EMC3 chr3 10023417 - Exonic hg19 TGCT TCGA-2G-AAGC 3 10 Out-of-frame Inter-chr q32.31 p25.3 Seq+ 53567 ChimerSeq STARFusion TCGA_RNA-Seq RCOR1-EMC3 RCOR1 chr14 103059662 + EMC3 chr3 10019130 - Exonic hg19 TGCT TCGA-2G-AAGC 3 10 Out-of-frame Inter-chr q32.31 p25.3 Seq+ 53568 ChimerSeq STARFusion TCGA_RNA-Seq RCOR1-EMC3 RCOR1 chr14 103059662 + EMC3 chr3 10016172 - Exonic hg19 TGCT TCGA-2G-AAGC 2 10 Out-of-frame Inter-chr q32.31 p25.3 Seq+ 53569 ChimerSeq STARFusion TCGA_RNA-Seq ATP2B1-YAF2 ATP2B1 chr12 90021455 - YAF2 chr12 42593037 - Exonic hg19 TGCT TCGA-2G-AAGG 4 37 CDS-3'UTR Intra-chr q21.33 q12 Seq+ 53570 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-GNAS MIR302B chr4 113569810 - GNAS chr20 57470667 + Exonic hg19 TGCT TCGA-2G-AAGF 8 0 5'UTR-5'UTR Inter-chr q25 Tumor suppressor gene q13.32 Oncogene 53571 ChimerSeq STARFusion TCGA_RNA-Seq LIN28A-EXO1 LIN28A chr1 26755050 + EXO1 chr1 242055823 + Exonic hg19 TGCT TCGA-2G-AAGF 6 1 Out-of-frame Intra-chr p36.11 Transcription factor q43 53572 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-GNAS MIR302B chr4 113569810 - GNAS chr20 57470667 + Exonic hg19 TGCT TCGA-2G-AAGZ 10 0 5'UTR-5'UTR Inter-chr q25 Tumor suppressor gene q13.32 Oncogene 53573 ChimerSeq STARFusion TCGA_RNA-Seq PTK7-SRF PTK7 chr6 43044305 + SRF chr6 43146544 + Exonic hg19 TGCT TCGA-2G-AAGZ 2 14 In-Frame Intra-chr p21.1 p21.1 Transcription factor Seq+ 53574 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-LDHB GNB1 chr1 1756836 - LDHB chr12 21807611 - Exonic hg19 TGCT TCGA-2G-AAGP 13 28 CDS-5'UTR Inter-chr p36.33 p12.1 Seq+ 53575 ChimerSeq STARFusion TCGA_RNA-Seq RXRA-IGH@ RXRA chr9 137326058 + IGH@ chr14 106111065 - Exonic hg19 TGCT TCGA-2G-AAGP 5 1 Out-of-frame Inter-chr q34.2 Transcription factor 32.33 53576 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-GNAS MIR302B chr4 113569810 - GNAS chr20 57470667 + Exonic hg19 TGCT TCGA-2G-AAGS 7 2 5'UTR-5'UTR Inter-chr q25 Tumor suppressor gene q13.32 Oncogene 53577 ChimerSeq STARFusion TCGA_RNA-Seq LIN28A-EXO1 LIN28A chr1 26755049 + EXO1 chr1 242055823 + Exonic hg19 TGCT TCGA-2G-AAGS 5 2 Out-of-frame Intra-chr p36.11 Transcription factor q43 53578 ChimerSeq STARFusion TCGA_RNA-Seq LIN28A-EXO1 LIN28A chr1 26843880 + EXO1 chr1 242055823 + Exonic hg19 TGCT TCGA-2G-AAGS 4 2 Out-of-frame Intra-chr p36.11 Transcription factor q43 53579 ChimerSeq STARFusion TCGA_RNA-Seq SORBS1-XRCC6P1 SORBS1 chr10 97252922 - XRCC6P1 chr10 94968818 - Exonic hg19 TGCT TCGA-2G-AAGT 10 1 Out-of-frame Intra-chr q24.1 q23.33 Seq+ 53580 ChimerSeq STARFusion TCGA_RNA-Seq RAB3IP-MYRFL RAB3IP chr12 70150443 + MYRFL chr12 70272808 + Exonic hg19 TGCT TCGA-2G-AAGT 6 6 Out-of-frame Intra-chr q15 q15 Transcription factor Seq+ 53581 ChimerSeq STARFusion TCGA_RNA-Seq LIN28A-EXO1 LIN28A chr1 26755054 + EXO1 chr1 242055827 + Exonic hg19 TGCT TCGA-2G-AAGT 7 1 Out-of-frame Intra-chr p36.11 Transcription factor q43 53582 ChimerSeq STARFusion TCGA_RNA-Seq KIF21A-CPM KIF21A chr12 39836729 - CPM chr12 69279669 - Exonic hg19 TGCT TCGA-2G-AAGT 2 9 Out-of-frame Intra-chr q12 q15 Seq+ 53583 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-GNAS MIR302B chr4 113569810 - GNAS chr20 57470667 + Exonic hg19 TGCT TCGA-2G-AAGW 6 1 5'UTR-5'UTR Inter-chr q25 Tumor suppressor gene q13.32 Oncogene 53584 ChimerSeq STARFusion TCGA_RNA-Seq CNN3-LINC01057 CNN3 chr1 95392394 - LINC01057 chr1 95145163 - Exonic hg19 TGCT TCGA-2G-AAGW 4 3 Out-of-frame Intra-chr p21.3 53585 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-GNAS MIR302B chr4 113569810 - GNAS chr20 57470667 + Exonic hg19 TGCT TCGA-XE-A8H1 28 5 5'UTR-5'UTR Inter-chr q25 Tumor suppressor gene q13.32 Oncogene 53586 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-IGHG2 DHRSX chrY 2134830 - IGHG2 chr14 106111129 - Exonic hg19 TGCT TCGA-SB-A6J6 40 1 Out-of-frame Inter-chr p22.33 53587 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-HSPA8 IGH@ chr14 107083254 - HSPA8 chr11 122932623 - Exonic hg19 TGCT TCGA-SB-A6J6 35 3 Out-of-frame Inter-chr 32.33 q24.1 53588 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-HSPA8 IGH@ chr14 106805207 - HSPA8 chr11 122932623 - Exonic hg19 TGCT TCGA-SB-A6J6 31 3 Out-of-frame Inter-chr 32.33 q24.1 53589 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-HSPA8 IGH@ chr14 106478108 - HSPA8 chr11 122932623 - Exonic hg19 TGCT TCGA-SB-A6J6 30 3 Out-of-frame Inter-chr 32.33 q24.1 53590 ChimerSeq STARFusion TCGA_RNA-Seq SRPK1-CCL18 SRPK1 chr6 35888245 - CCL18 chr17 34397807 + Exonic hg19 TGCT TCGA-SB-A6J6 19 36 Out-of-frame Inter-chr p21.31 CMGC:SRPK q12 Seq+ 53591 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-HSPA8 IGH@ chr14 107048670 - HSPA8 chr11 122932623 - Exonic hg19 TGCT TCGA-SB-A6J6 24 3 Out-of-frame Inter-chr 32.33 q24.1 53592 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-HSPA8 IGH@ chr14 106993812 - HSPA8 chr11 122932623 - Exonic hg19 TGCT TCGA-SB-A6J6 15 3 Out-of-frame Inter-chr 32.33 q24.1 53593 ChimerSeq STARFusion TCGA_RNA-Seq NPHP4-IGKC NPHP4 chr1 5940290 - IGKC chr2 89160431 - Exonic hg19 TGCT TCGA-SB-A6J6 12 1 Out-of-frame Inter-chr p36.31 p11.2 53594 ChimerSeq STARFusion TCGA_RNA-Seq DHRSX-IGHG2 DHRSX chrY 2134830 - IGHG2 chr14 106209410 - Exonic hg19 TGCT TCGA-SB-A6J6 11 1 Out-of-frame Inter-chr p22.33 53595 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-HSPA8 IGH@ chr14 106791003 - HSPA8 chr11 122932623 - Exonic hg19 TGCT TCGA-SB-A6J6 10 3 Out-of-frame Inter-chr 32.33 q24.1 53596 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-HSPA8 IGH@ chr14 106691671 - HSPA8 chr11 122932623 - Exonic hg19 TGCT TCGA-SB-A6J6 8 3 Out-of-frame Inter-chr 32.33 q24.1 53597 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-HSPA8 IGH@ chr14 106815720 - HSPA8 chr11 122932623 - Exonic hg19 TGCT TCGA-SB-A6J6 8 3 Out-of-frame Inter-chr 32.33 q24.1 53598 ChimerSeq STARFusion TCGA_RNA-Seq FCGR3A-IGH@ FCGR3A chr1 161514735 - IGH@ chr14 106967356 - Exonic hg19 TGCT TCGA-SB-A6J6 7 2 Out-of-frame Inter-chr q23.3 32.33 53599 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-HSPA8 IGH@ chr14 107095124 - HSPA8 chr11 122932623 - Exonic hg19 TGCT TCGA-SB-A6J6 6 3 Out-of-frame Inter-chr 32.33 q24.1 53600 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-HSPA8 IGH@ chr14 106725199 - HSPA8 chr11 122932623 - Exonic hg19 TGCT TCGA-SB-A6J6 6 3 Out-of-frame Inter-chr 32.33 q24.1 53601 ChimerSeq STARFusion TCGA_RNA-Seq TNK2-MFI2 TNK2 chr3 195635356 - MFI2 chr3 196737665 - Exonic hg19 TGCT TCGA-XE-A8H4 10 69 5'UTR-CDS Intra-chr q29 Oncogene Seq+ 53602 ChimerSeq STARFusion TCGA_RNA-Seq TNK2-MFI2 TNK2 chr3 195635356 - MFI2 chr3 196742387 - Exonic hg19 TGCT TCGA-XE-A8H4 3 69 5'UTR-CDS Intra-chr q29 Oncogene Seq+ 53603 ChimerSeq STARFusion TCGA_RNA-Seq HIATL1-TMEFF1 HIATL1 chr9 97137209 + TMEFF1 chr9 103275589 + Exonic hg19 TGCT TCGA-XE-A8H4 7 8 Out-of-frame Intra-chr q31.1 Tumor suppressor gene 53604 ChimerSeq STARFusion TCGA_RNA-Seq CCDC91-AEBP2 CCDC91 chr12 28412375 + AEBP2 chr12 19615444 + Exonic hg19 TGCT TCGA-2G-AAF8 6 21 Out-of-frame Intra-chr p11.22 p12.3 Transcription factor Seq+ 53605 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1551-DDI1 KIAA1551 chr12 32113805 + DDI1 chr11 103907220 + Exonic hg19 TGCT TCGA-2G-AAF8 3 4 Out-of-frame Inter-chr p11.21 q22.3 53606 ChimerSeq STARFusion TCGA_RNA-Seq MRPS31P2-PSPC1 MRPS31P2 chr13 20126711 - PSPC1 chr13 20251963 - Exonic hg19 TGCT TCGA-2G-AAF6 7 11 Out-of-frame Intra-chr q12.11 q12.11 53607 ChimerSeq STARFusion TCGA_RNA-Seq C7orf10-RALA C7orf10 chr7 40174719 + RALA chr7 39726230 + Exonic hg19 TGCT TCGA-2G-AAF6 6 8 CDS-5'UTR Intra-chr p14.1 Seq+ 53608 ChimerSeq STARFusion TCGA_RNA-Seq GIT2-SLC2A13 GIT2 chr12 110426768 - SLC2A13 chr12 40345167 - Exonic hg19 TGCT TCGA-2G-AAF6 3 8 Out-of-frame Intra-chr q24.11 q12 Seq+ 53609 ChimerSeq STARFusion TCGA_RNA-Seq LIN28A-EXO1 LIN28A chr1 26755050 + EXO1 chr1 242055823 + Exonic hg19 TGCT TCGA-2G-AAFN 5 2 Out-of-frame Intra-chr p36.11 Transcription factor q43 53610 ChimerSeq STARFusion TCGA_RNA-Seq TYW1B-GTF2IRD2P1 TYW1B chr7 72178579 - GTF2IRD2P1 chr7 72694143 - Exonic hg19 TGCT TCGA-2G-AAFM 17 35 CDS-5'UTR Intra-chr q11.23 q11.23 Seq+ 53611 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-GNAS MIR302B chr4 113569810 - GNAS chr20 57470667 + Exonic hg19 TGCT TCGA-2G-AAFM 6 1 5'UTR-5'UTR Inter-chr q25 Tumor suppressor gene q13.32 Oncogene 53612 ChimerSeq STARFusion TCGA_RNA-Seq RPL19-IGL@ RPL19 chr17 37356754 + IGL@ chr22 23235961 + Exonic hg19 TGCT TCGA-2G-AAFH 15 2 Out-of-frame Inter-chr q12 q11.22 53613 ChimerSeq STARFusion TCGA_RNA-Seq C12orf65-IGL@ C12orf65 chr12 123738790 + IGL@ chr22 23241801 + Exonic hg19 TGCT TCGA-2G-AAFH 10 1 Out-of-frame Inter-chr q24.31 q11.22 53614 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-KDM5C IGH@ chr14 106757649 - KDM5C chrX 53224500 - Exonic hg19 TGCT TCGA-2G-AAFH 7 1 Out-of-frame Inter-chr 32.33 p11.22 Oncogene 53615 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SEP15 IGH@ chr14 107062129 - 2019_ 9_ 15_ chr1 87379790 - Exonic hg19 TGCT TCGA-2G-AAFH 6 1 Out-of-frame Inter-chr 32.33 53616 ChimerSeq STARFusion TCGA_RNA-Seq IGHGP-FBN3 IGHGP chr14 106134592 - FBN3 chr19 8138054 - Exonic hg19 TGCT TCGA-2G-AAFH 6 1 Out-of-frame Inter-chr p13.2 53617 ChimerSeq STARFusion TCGA_RNA-Seq GLUL-IGH@ GLUL chr1 182358968 - IGH@ chr14 106967238 - Exonic hg19 TGCT TCGA-2G-AAFH 5 1 Out-of-frame Inter-chr q25.3 32.33 53618 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SEP15 IGH@ chr14 107095127 - 2019_ 9_ 15_ chr1 87379790 - Exonic hg19 TGCT TCGA-2G-AAFH 5 1 Out-of-frame Inter-chr 32.33 53619 ChimerSeq STARFusion TCGA_RNA-Seq SF3B3-ADAM12 SF3B3 chr16 70604052 + ADAM12 chr10 127967557 - Exonic hg19 TGCT TCGA-2G-AAFI 10 24 In-Frame Inter-chr q22.1 q26.2 Seq+ 53620 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-GNAS MIR302B chr4 113569810 - GNAS chr20 57470667 + Exonic hg19 TGCT TCGA-2G-AAFI 9 0 5'UTR-5'UTR Inter-chr q25 Tumor suppressor gene q13.32 Oncogene 53621 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-GNAS MIR302B chr4 113569810 - GNAS chr20 57470667 + Exonic hg19 TGCT TCGA-2G-AAFZ 10 0 5'UTR-5'UTR Inter-chr q25 Tumor suppressor gene q13.32 Oncogene 53622 ChimerSeq STARFusion TCGA_RNA-Seq NCOA4-MSMB NCOA4 chr10 51585599 + MSMB chr10 51555731 + Exonic hg19 TGCT TCGA-2G-AAFV 19 41 In-Frame Intra-chr q11.22 Oncogene Tumor suppressor gene q11.22 Tumor suppressor gene Seq+ 53623 ChimerSeq STARFusion TCGA_RNA-Seq LIN28A-CD52 LIN28A chr1 26738073 + CD52 chr1 26646662 + Exonic hg19 TGCT TCGA-2G-AAFV 9 31 In-Frame Intra-chr p36.11 Transcription factor p36.11 Seq+ 53624 ChimerSeq STARFusion TCGA_RNA-Seq KCNA5-IGH@ KCNA5 chr12 5153890 + IGH@ chr14 106237745 - Exonic hg19 TGCT TCGA-2G-AAFV 12 0 Out-of-frame Inter-chr p13.32 32.33 53625 ChimerSeq STARFusion TCGA_RNA-Seq KCNA5-IGHG1 KCNA5 chr12 5153890 + IGHG1 chr14 106209410 - Exonic hg19 TGCT TCGA-2G-AAFV 12 0 Out-of-frame Inter-chr p13.32 q32.33 53626 ChimerSeq STARFusion TCGA_RNA-Seq KCNA5-IGH@ KCNA5 chr12 5153890 + IGH@ chr14 106136184 - Exonic hg19 TGCT TCGA-2G-AAFV 10 0 Out-of-frame Inter-chr p13.32 32.33 53627 ChimerSeq STARFusion TCGA_RNA-Seq KCNA5-IGH@ KCNA5 chr12 5153890 + IGH@ chr14 106092405 - Exonic hg19 TGCT TCGA-2G-AAFV 7 0 Out-of-frame Inter-chr p13.32 32.33 53628 ChimerSeq STARFusion TCGA_RNA-Seq STAU1-ZNFX1 STAU1 chr20 47790732 - ZNFX1 chr20 47874201 - Exonic hg19 TGCT TCGA-2G-AAFV 2 11 5'UTR-CDS Intra-chr q13.13 q13.13 53629 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-LONP1 IGH@ chr14 106610314 - LONP1 chr19 5719919 - Exonic hg19 TGCT TCGA-XE-AAOD 21 1 Out-of-frame Inter-chr 32.33 p13.3 53630 ChimerSeq STARFusion TCGA_RNA-Seq PRPF40A-IGH@ PRPF40A chr2 153574304 - IGH@ chr14 106329450 - Exonic hg19 TGCT TCGA-XE-AAOD 12 2 Out-of-frame Inter-chr q23.3 32.33 53631 ChimerSeq STARFusion TCGA_RNA-Seq PRPF40A-IGHG3 PRPF40A chr2 153574304 - IGHG3 chr14 106329450 - Exonic hg19 TGCT TCGA-XE-AAOD 12 1 Out-of-frame Inter-chr q23.3 53632 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-SPCS1 IGH@ chr14 106791003 - SPCS1 chr3 52740052 + Exonic hg19 TGCT TCGA-XE-AAOD 7 1 Out-of-frame Inter-chr 32.33 p21.1 53633 ChimerSeq STARFusion TCGA_RNA-Seq AMBRA1-HARBI1 AMBRA1 chr11 46615378 - HARBI1 chr11 46637931 - Exonic hg19 TGCT TCGA-XE-AAOD 3 6 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 53634 ChimerSeq STARFusion TCGA_RNA-Seq PSAP-IGKC PSAP chr10 73590961 - IGKC chr2 89161070 - Exonic hg19 TGCT TCGA-WZ-A7V4 8 2 Out-of-frame Inter-chr q22.1 p11.2 53635 ChimerSeq STARFusion TCGA_RNA-Seq ICMT-ACOT7 ICMT chr1 6291962 - ACOT7 chr1 6324755 - Exonic hg19 TGCT TCGA-2G-AAG8 9 52 In-Frame Intra-chr p36.31 p36.31 Seq+ 53636 ChimerSeq STARFusion TCGA_RNA-Seq DNAH10OS-IGH@ DNAH10OS chr12 124414795 - IGH@ chr14 106330466 - Exonic hg19 TGCT TCGA-2X-A9D5 98 1 Out-of-frame Inter-chr q24.31 32.33 53637 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-STAU1 IGH@ chr14 107034729 - STAU1 chr20 47731256 - Exonic hg19 TGCT TCGA-2X-A9D5 12 1 Out-of-frame Inter-chr 32.33 q13.13 53638 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-GNAS MIR302B chr4 113569810 - GNAS chr20 57470667 + Exonic hg19 TGCT TCGA-2G-AAG0 5 1 5'UTR-5'UTR Inter-chr q25 Tumor suppressor gene q13.32 Oncogene 53639 ChimerSeq STARFusion TCGA_RNA-Seq FAM157C-WARS2 FAM157C chr16 90182891 + WARS2 chr1 119619230 - Exonic hg19 TGCT TCGA-2G-AAG3 5 4 Out-of-frame Inter-chr q24.3 p12 53640 ChimerSeq STARFusion TCGA_RNA-Seq XBP1-TTC28 XBP1 chr22 29192035 - TTC28 chr22 28559587 - Exonic hg19 TGCT TCGA-2X-A9D6 8 17 In-Frame Intra-chr q12.1 Transcription factor q12.1 Seq+ 53641 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC14-IGH@ ZCCHC14 chr16 87451319 - IGH@ chr14 106330464 - Exonic hg19 TGCT TCGA-2X-A9D6 10 0 Out-of-frame Inter-chr q24.2 32.33 53642 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC14-IGHG3 ZCCHC14 chr16 87451319 - IGHG3 chr14 106330464 - Exonic hg19 TGCT TCGA-2X-A9D6 10 0 Out-of-frame Inter-chr q24.2 53643 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC14-IGHJ4 ZCCHC14 chr16 87451319 - IGHJ4 chr14 106330464 - Exonic hg19 TGCT TCGA-2X-A9D6 10 0 Out-of-frame Inter-chr q24.2 Seq+ 53644 ChimerSeq STARFusion TCGA_RNA-Seq KCTD20-PIP5K1P1 KCTD20 chr6 36457999 + PIP5K1P1 chr6 7987766 + Exonic hg19 TGCT TCGA-2X-A9D6 8 0 Out-of-frame Intra-chr p21.31 p24.3 53645 ChimerSeq STARFusion TCGA_RNA-Seq MIR302B-GNAS MIR302B chr4 113569810 - GNAS chr20 57470667 + Exonic hg19 TGCT TCGA-2G-AAG7 4 1 5'UTR-5'UTR Inter-chr q25 Tumor suppressor gene q13.32 Oncogene 53646 ChimerSeq STARFusion TCGA_RNA-Seq FTSJ2-MAD1L1 FTSJ2 chr7 2281797 - MAD1L1 chr7 2108973 - Exonic hg19 TGCT TCGA-2G-AAG6 9 4 In-Frame Intra-chr p22.3 Tumor suppressor gene 53647 ChimerSeq STARFusion TCGA_RNA-Seq PDCD6IP-IGKC PDCD6IP chr3 33907905 + IGKC chr2 89161435 - Exonic hg19 THCA TCGA-EL-A3CW-01A 10 1 Out-of-frame Inter-chr p22.3 p11.2 53648 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86351941 + Exonic hg19 THCA TCGA-EM-A3O7-01A 2 12 Out-of-frame Intra-chr q21.2 q21.2 53649 ChimerSeq STARFusion TCGA_RNA-Seq MKRN1-BRAF MKRN1 chr7 140158807 - BRAF chr7 140487384 - Exonic hg19 THCA TCGA-J8-A3O1-01A 14 49 In-Frame Intra-chr q34 q34 TKL:RAF Oncogene KB Pub Seq+ 53650 ChimerSeq STARFusion TCGA_RNA-Seq NCOA4-RET NCOA4 chr10 51582939 + RET chr10 43612032 + Exonic hg19 THCA TCGA-DE-A3KN-01A 24 124 In-Frame Intra-chr q11.22 Oncogene Tumor suppressor gene q11.21 TK:Ret Oncogene KB Pub Seq+ 53651 ChimerSeq STARFusion TCGA_RNA-Seq GPR141-NME8 GPR141 chr7 37725186 + NME8 chr7 37896876 + Exonic hg19 THCA TCGA-DE-A3KN-01A 3 10 Out-of-frame Intra-chr p14.1 p14.1 53652 ChimerSeq STARFusion TCGA_RNA-Seq LOC400794-RXRG LOC400794 chr1 165543255 - RXRG chr1 165398203 - Exonic hg19 THCA TCGA-FK-A3SB-01A 9 21 3'UTR-CDS Intra-chr q23.3 Transcription factor 53653 ChimerSeq STARFusion TCGA_RNA-Seq GTF2IRD1-ALK GTF2IRD1 chr7 73935627 + ALK chr2 29446394 - Exonic hg19 THCA TCGA-EL-A4KD-01A 11 27 In-Frame Inter-chr q11.23 Transcription factor p23.1 TK:ALK Oncogene Seq+ 53654 ChimerSeq STARFusion TCGA_RNA-Seq TG-DPRX TG chr8 133984986 + DPRX chr19 54135316 + Exonic hg19 THCA TCGA-H2-A2K9-01A 3437 13847 CDS-5'UTR Inter-chr q24.22 q13.42 Transcription factor 53655 ChimerSeq STARFusion TCGA_RNA-Seq GPR107-RPL27 GPR107 chr9 132890993 + RPL27 chr17 41152084 + Exonic hg19 THCA TCGA-H2-A2K9-01A 3 1 Out-of-frame Inter-chr q34.11 q21.31 53656 ChimerSeq STARFusion TCGA_RNA-Seq TRO-MAGED2 TRO chrX 54953058 + MAGED2 chrX 54839921 + Exonic hg19 THCA TCGA-H2-A2K9-01A 2 1 In-Frame Intra-chr p11.21 p11.21 53657 ChimerSeq STARFusion TCGA_RNA-Seq TG-BMS1P8 TG chr8 134042268 + BMS1P8 chr16 33500962 - Exonic hg19 THCA TCGA-FY-A3NP-01A 985 2946 Out-of-frame Inter-chr q24.22 p11.2 53658 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-TINAGL1 IGHG1 chr14 106134591 - TINAGL1 chr1 32052503 + Exonic hg19 THCA TCGA-IM-A4EB-01A 20 1 Out-of-frame Inter-chr q32.33 p35.2 53659 ChimerSeq STARFusion TCGA_RNA-Seq SLC34A2-IGH@ SLC34A2 chr4 25677935 + IGH@ chr14 106329447 - Exonic hg19 THCA TCGA-IM-A4EB-01A 3 9 Out-of-frame Inter-chr p15.2 32.33 53660 ChimerSeq STARFusion TCGA_RNA-Seq CLU-ATP2A2 CLU chr8 27462647 - ATP2A2 chr12 110786604 + Exonic hg19 THCA TCGA-EL-A3CN-01A 3 1 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q24.11 53661 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-J8-A4HW-06A 24 119 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 53662 ChimerSeq STARFusion TCGA_RNA-Seq CPQ-SDC2 CPQ chr8 97657630 + SDC2 chr8 97605708 + Exonic hg19 THCA TCGA-J8-A4HW-06A 2 1 5'UTR-CDS Intra-chr q22.1 q22.1 53663 ChimerSeq STARFusion TCGA_RNA-Seq TG-THADA TG chr8 133984986 + THADA chr2 43520352 - Exonic hg19 THCA TCGA-DJ-A1QL-01A 2166 14891 In-Frame Inter-chr q24.22 p21 Seq+ 53664 ChimerSeq STARFusion TCGA_RNA-Seq THADA-IGF2BP3 THADA chr2 43547585 - IGF2BP3 chr7 23458443 - Exonic hg19 THCA TCGA-DJ-A1QL-01A 2 1 Out-of-frame Inter-chr p21 p15.3 Seq+ 53665 ChimerSeq STARFusion TCGA_RNA-Seq TRA2A-THADA TRA2A chr7 23545365 - THADA chr2 43460021 - Exonic hg19 THCA TCGA-ET-A3DV-01A 3 6 In-Frame Inter-chr p15.3 p21 Seq+ 53666 ChimerSeq STARFusion TCGA_RNA-Seq IGHGP-FBN3 IGHGP chr14 106134586 - FBN3 chr19 8138048 - Exonic hg19 THCA TCGA-EM-A22M-01A 25 0 Out-of-frame Inter-chr p13.2 53667 ChimerSeq STARFusion TCGA_RNA-Seq HCFC1-IGHG4 HCFC1 chrX 153222122 - IGHG4 chr14 106111130 - Exonic hg19 THCA TCGA-EM-A22M-01A 16 1 Out-of-frame Inter-chr q28 53668 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-AR IGL@ chr22 23248962 + AR chrX 66764977 + Exonic hg19 THCA TCGA-EM-A22M-01A 9 0 Out-of-frame Inter-chr q11.22 q12 Oncogene Tumor suppressor gene Transcription factor 53669 ChimerSeq STARFusion TCGA_RNA-Seq IGLC2-AR IGLC2 chr22 23248962 + AR chrX 66764977 + Exonic hg19 THCA TCGA-EM-A22M-01A 9 0 Out-of-frame Inter-chr q11.22 q12 Oncogene Tumor suppressor gene Transcription factor 53670 ChimerSeq STARFusion TCGA_RNA-Seq MDN1-IGHG3 MDN1 chr6 90504430 - IGHG3 chr14 106331651 - Exonic hg19 THCA TCGA-EM-A22M-01A 8 1 Out-of-frame Inter-chr q15 53671 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-HIVEP3 IGHG1 chr14 106207995 - HIVEP3 chr1 41978893 - Exonic hg19 THCA TCGA-EM-A22M-01A 7 1 Out-of-frame Inter-chr q32.33 p34.2 Tumor suppressor gene Transcription factor 53672 ChimerSeq STARFusion TCGA_RNA-Seq GNAS-INPP5K GNAS chr20 57485456 + INPP5K chr17 1411667 - Exonic hg19 THCA TCGA-BJ-A45F-01A 11 1 5'UTR-CDS Inter-chr q13.32 Oncogene p13.3 53673 ChimerSeq STARFusion TCGA_RNA-Seq SOS1-MAP4K3 SOS1 chr2 39283843 - MAP4K3 chr2 39605264 - Exonic hg19 THCA TCGA-EL-A3H8-01A 4 25 In-Frame Intra-chr p22.1 p22.1 Seq+ 53674 ChimerSeq STARFusion TCGA_RNA-Seq JAZF1-TAX1BP1 JAZF1 chr7 28220082 - TAX1BP1 chr7 27824782 + Exonic hg19 THCA TCGA-EL-A3H1-01A 2 3 Out-of-frame Intra-chr p15.1 Transcription factor p15.2 Seq+ 53675 ChimerSeq STARFusion TCGA_RNA-Seq GPR141-NME8 GPR141 chr7 37725186 + NME8 chr7 37896876 + Exonic hg19 THCA TCGA-EM-A3OB-01A 2 12 Out-of-frame Intra-chr p14.1 p14.1 53676 ChimerSeq STARFusion TCGA_RNA-Seq PAX8-PPARG PAX8 chr2 113992971 - PPARG chr3 12421203 + Exonic hg19 THCA TCGA-EM-A3AJ-01A 91 822 In-Frame Inter-chr q14.1 Oncogene Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 53677 ChimerSeq STARFusion TCGA_RNA-Seq PAX8-PPARG PAX8 chr2 113994178 - PPARG chr3 12421203 + Exonic hg19 THCA TCGA-EM-A3AJ-01A 54 822 In-Frame Inter-chr q14.1 Oncogene Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 53678 ChimerSeq STARFusion TCGA_RNA-Seq PPARG-PAX8 PPARG chr3 12353952 + PAX8 chr2 113984833 - Exonic hg19 THCA TCGA-EM-A3AJ-01A 10 44 5'UTR-CDS Inter-chr p25.2 Oncogene Tumor suppressor gene Transcription factor q14.1 Oncogene Transcription factor KB Seq+ 53679 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86351941 + Exonic hg19 THCA TCGA-J8-A3YG-01A 3 15 Out-of-frame Intra-chr q21.2 q21.2 53680 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86295183 + Exonic hg19 THCA TCGA-J8-A3YG-01A 2 15 CDS-5'UTR Intra-chr q21.2 q21.2 53681 ChimerSeq STARFusion TCGA_RNA-Seq TMEM178B-RBM28 TMEM178B chr7 140912504 + RBM28 chr7 127955073 - Exonic hg19 THCA TCGA-CE-A484-01A 2 12 Out-of-frame Intra-chr q34 q32.1 Seq+ 53682 ChimerSeq STARFusion TCGA_RNA-Seq RBM28-AOAH RBM28 chr7 127957712 - AOAH chr7 36634036 - Exonic hg19 THCA TCGA-CE-A484-01A 3 6 In-Frame Intra-chr q32.1 p14.2 Seq+ 53683 ChimerSeq STARFusion TCGA_RNA-Seq NPC2-TOP2B NPC2 chr14 74946725 - TOP2B chr3 25665886 - Exonic hg19 THCA TCGA-EM-A4FU-01A 4 2 Out-of-frame Inter-chr q24.3 p24.2 53684 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK4-HMGN2P46 EIF2AK4 chr15 40241469 + HMGN2P46 chr15 45847688 + Exonic hg19 THCA TCGA-FE-A239-01A 14 99 CDS-5'UTR Intra-chr q15.1 q21.1 Seq+ 53685 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK4-HMGN2P46 EIF2AK4 chr15 40241469 + HMGN2P46 chr15 45847671 + Exonic hg19 THCA TCGA-FE-A239-01A 5 97 CDS-5'UTR Intra-chr q15.1 q21.1 Seq+ 53686 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK4-HMGN2P46 EIF2AK4 chr15 40241469 + HMGN2P46 chr15 45878376 + Exonic hg19 THCA TCGA-FE-A239-01A 3 97 CDS-3'UTR Intra-chr q15.1 q21.1 Seq+ 53687 ChimerSeq STARFusion TCGA_RNA-Seq LMBRD1-LGSN LMBRD1 chr6 70428848 - LGSN chr6 64004950 - Exonic hg19 THCA TCGA-FE-A239-01A 9 35 In-Frame Intra-chr q13 q12 Seq+ 53688 ChimerSeq STARFusion TCGA_RNA-Seq MET-TES MET chr7 116340338 + TES chr7 115874588 + Exonic hg19 THCA TCGA-ET-A3BU-01A 2 1 In-Frame Intra-chr q31.2 TK:Met Oncogene q31.2 Tumor suppressor gene 53689 ChimerSeq STARFusion TCGA_RNA-Seq ST5-ATXN10 ST5 chr11 8832794 - ATXN10 chr22 46125305 + Exonic hg19 THCA TCGA-ET-A3BU-01A 2 1 5'UTR-CDS Inter-chr p15.4 Tumor suppressor gene q13.31 53690 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-EL-A3CY-01A 14 74 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 53691 ChimerSeq STARFusion TCGA_RNA-Seq TG-LINC01054 TG chr8 133948109 + LINC01054 chr13 115096253 - Exonic hg19 THCA TCGA-EL-A3T2-01A 2 69 Out-of-frame Inter-chr q24.22 q34 53692 ChimerSeq STARFusion TCGA_RNA-Seq FURIN-IGH@ FURIN chr15 91425602 + IGH@ chr14 106452981 - Exonic hg19 THCA TCGA-BJ-A3PR-01A 5 3 Out-of-frame Inter-chr q26.1 32.33 53693 ChimerSeq STARFusion TCGA_RNA-Seq GPX3-IGH@ GPX3 chr5 150400491 + IGH@ chr14 106209410 - Exonic hg19 THCA TCGA-BJ-A3PR-01A 4 4 Out-of-frame Inter-chr q33.1 Tumor suppressor gene 32.33 53694 ChimerSeq STARFusion TCGA_RNA-Seq EEF1A1-FN1 EEF1A1 chr6 74227853 - FN1 chr2 216230291 - Exonic hg19 THCA TCGA-EL-A3GP-01A 3 26 Out-of-frame Inter-chr q13 Tumor suppressor gene q35 Oncogene 53695 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86295183 + Exonic hg19 THCA TCGA-FY-A4B4-01A 3 12 CDS-5'UTR Intra-chr q21.2 q21.2 53696 ChimerSeq STARFusion TCGA_RNA-Seq PPIP5K1-CATSPER2 PPIP5K1 chr15 43856301 - CATSPER2 chr15 43939665 - Exonic hg19 THCA TCGA-EL-A4JZ-01A 2 7 In-Frame Intra-chr q15.3 q15.3 53697 ChimerSeq STARFusion TCGA_RNA-Seq P4HB-ARHGDIA P4HB chr17 79817270 - ARHGDIA chr17 79829278 - Exonic hg19 THCA TCGA-EM-A3ST-01A 6 16 Out-of-frame Intra-chr q25.3 q25.3 53698 ChimerSeq STARFusion TCGA_RNA-Seq RMST-C9orf3 RMST chr12 97954825 + C9orf3 chr9 97848964 + Exonic hg19 THCA TCGA-EM-A3ST-01A 2 9 3'UTR-3'UTR Inter-chr q23.1 q22.32 53699 ChimerSeq STARFusion TCGA_RNA-Seq EEF1A1-FN1 EEF1A1 chr6 74228310 - FN1 chr2 216236832 - Exonic hg19 THCA TCGA-DJ-A2PY-01A 3 23 Out-of-frame Inter-chr q13 Tumor suppressor gene q35 Oncogene 53700 ChimerSeq STARFusion TCGA_RNA-Seq FN1-CTSB FN1 chr2 216226123 - CTSB chr8 11702518 - Exonic hg19 THCA TCGA-DJ-A2PY-01A 3 15 Out-of-frame Inter-chr q35 Oncogene p23.1 53701 ChimerSeq STARFusion TCGA_RNA-Seq BRAF-SND1 BRAF chr7 140487348 - SND1 chr7 127724776 + Exonic hg19 THCA TCGA-EL-A3ZK-01A 34 78 In-Frame Intra-chr q34 TKL:RAF Oncogene q32.1 Seq+ 53702 ChimerSeq STARFusion TCGA_RNA-Seq SND1-BRAF SND1 chr7 127721553 + BRAF chr7 140482957 - Exonic hg19 THCA TCGA-EL-A3ZK-01A 4 34 In-Frame Intra-chr q32.1 q34 TKL:RAF Oncogene KB Pub Seq+ 53703 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86295183 + Exonic hg19 THCA TCGA-EL-A3ZK-01A 3 14 CDS-5'UTR Intra-chr q21.2 q21.2 53704 ChimerSeq STARFusion TCGA_RNA-Seq TIMM23B-LINC00843 TIMM23B chr10 51387763 + LINC00843 chr10 51732772 + Exonic hg19 THCA TCGA-EM-A1YB-01A 4 8 Out-of-frame Intra-chr q11.23 q11.23 53705 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-ET-A39R-01A 16 97 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 53706 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12006495 + NTRK3 chr15 88576276 - Exonic hg19 THCA TCGA-FE-A3PD-01A 9 71 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 53707 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86351941 + Exonic hg19 THCA TCGA-FE-A3PD-01A 2 20 Out-of-frame Intra-chr q21.2 q21.2 53708 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86295183 + Exonic hg19 THCA TCGA-FE-A3PD-01A 2 20 CDS-5'UTR Intra-chr q21.2 q21.2 53709 ChimerSeq STARFusion TCGA_RNA-Seq PAX8-PPARG PAX8 chr2 113992971 - PPARG chr3 12421203 + Exonic hg19 THCA TCGA-ET-A39N-01A 76 744 In-Frame Inter-chr q14.1 Oncogene Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 53710 ChimerSeq STARFusion TCGA_RNA-Seq PAX8-PPARG PAX8 chr2 113994178 - PPARG chr3 12421203 + Exonic hg19 THCA TCGA-ET-A39N-01A 26 744 In-Frame Inter-chr q14.1 Oncogene Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 53711 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525072 - IGHG1 chr14 106209410 - Exonic hg19 THCA TCGA-E3-A3DY-01A 26 0 Out-of-frame Inter-chr q34 Oncogene q32.33 53712 ChimerSeq STARFusion TCGA_RNA-Seq OTUD7B-IGH@ OTUD7B chr1 149915030 - IGH@ chr14 106330059 - Exonic hg19 THCA TCGA-E3-A3DY-01A 8 1 Out-of-frame Inter-chr q21.2 32.33 53713 ChimerSeq STARFusion TCGA_RNA-Seq ZNF740-SEPT9 ZNF740 chr12 53584282 + SEPT9 chr17 75494789 + Exonic hg19 THCA TCGA-DJ-A2QC-01A 18 1 Out-of-frame Inter-chr q13.13 Transcription factor 53714 ChimerSeq STARFusion TCGA_RNA-Seq TG-IYD TG chr8 134042268 + IYD chr6 150710488 + Exonic hg19 THCA TCGA-EL-A4K6-01A 2 3 Out-of-frame Inter-chr q24.22 q25.1 53715 ChimerSeq STARFusion TCGA_RNA-Seq APLP2-NCL APLP2 chr11 129992279 + NCL chr2 232320205 - Exonic hg19 THCA TCGA-DJ-A3UZ-01A 3 1 Out-of-frame Inter-chr q24.3 q37.1 53716 ChimerSeq STARFusion TCGA_RNA-Seq TG-CEP57 TG chr8 134108617 + CEP57 chr11 95560950 + Exonic hg19 THCA TCGA-DJ-A3UZ-01A 2 1 In-Frame Inter-chr q24.22 q21 53717 ChimerSeq STARFusion TCGA_RNA-Seq BRAF-FAM114A2 BRAF chr7 140482821 - FAM114A2 chr5 153382529 - Exonic hg19 THCA TCGA-ET-A3BN-01A 22 114 In-Frame Inter-chr q34 TKL:RAF Oncogene q33.2 Seq+ 53718 ChimerSeq STARFusion TCGA_RNA-Seq FAM114A2-BRAF FAM114A2 chr5 153390801 - BRAF chr7 140481493 - Exonic hg19 THCA TCGA-ET-A3BN-01A 2 17 In-Frame Inter-chr q33.2 q34 TKL:RAF Oncogene Seq+ 53719 ChimerSeq STARFusion TCGA_RNA-Seq HTATSF1-BRS3 HTATSF1 chrX 135586622 + BRS3 chrX 135572292 + Exonic hg19 THCA TCGA-EM-A3O6-01A 8 81 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 53720 ChimerSeq STARFusion TCGA_RNA-Seq LIPH-FN1 LIPH chr3 185270211 - FN1 chr2 216237098 - Exonic hg19 THCA TCGA-EM-A2CS-01A 2 1 In-Frame Inter-chr q27.2 q35 Oncogene 53721 ChimerSeq STARFusion TCGA_RNA-Seq PAX8-PPARG PAX8 chr2 113992971 - PPARG chr3 12421203 + Exonic hg19 THCA TCGA-BJ-A0ZF-01A 133 868 In-Frame Inter-chr q14.1 Oncogene Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 53722 ChimerSeq STARFusion TCGA_RNA-Seq SSBP2-NTRK1 SSBP2 chr5 80742687 - NTRK1 chr1 156845312 + Exonic hg19 THCA TCGA-CE-A3MD-01A 48 213 In-Frame Inter-chr q14.1 Tumor suppressor gene q23.1 Oncogene Seq+ 53723 ChimerSeq STARFusion TCGA_RNA-Seq APC-INSRR APC chr5 112043579 + INSRR chr1 156828485 - Exonic hg19 THCA TCGA-CE-A3MD-01A 4 25 CDS-5'UTR Inter-chr q22.2 Oncogene Tumor suppressor gene q23.1 Seq+ 53724 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-DJ-A3V3-01A 30 76 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 53725 ChimerSeq STARFusion TCGA_RNA-Seq SMARCD3-IGL@ SMARCD3 chr7 150973778 - IGL@ chr22 23247168 + Exonic hg19 THCA TCGA-DJ-A3V3-01A 16 0 Out-of-frame Inter-chr q36.1 q11.22 53726 ChimerSeq STARFusion TCGA_RNA-Seq SMARCD3-IGLC3 SMARCD3 chr7 150973778 - IGLC3 chr22 23247168 + Exonic hg19 THCA TCGA-DJ-A3V3-01A 16 0 Out-of-frame Inter-chr q36.1 q11.22 53727 ChimerSeq STARFusion TCGA_RNA-Seq SMARCD3-IGLJ3 SMARCD3 chr7 150973778 - IGLJ3 chr22 23247168 + Exonic hg19 THCA TCGA-DJ-A3V3-01A 16 0 Out-of-frame Inter-chr q36.1 q11.22 53728 ChimerSeq STARFusion TCGA_RNA-Seq HDGFRP2-IGKC HDGFRP2 chr19 4475577 + IGKC chr2 89160434 - Exonic hg19 THCA TCGA-DJ-A3V3-01A 13 1 Out-of-frame Inter-chr p11.2 53729 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-TINAGL1 IGHG1 chr14 106134590 - TINAGL1 chr1 32052504 + Exonic hg19 THCA TCGA-DJ-A3V3-01A 8 1 Out-of-frame Inter-chr q32.33 p35.2 53730 ChimerSeq STARFusion TCGA_RNA-Seq CLU-TESC CLU chr8 27455977 - TESC chr12 117536326 - Exonic hg19 THCA TCGA-DJ-A3V3-01A 7 2 3'UTR-3'UTR Inter-chr p21.1 Tumor suppressor gene q24.22 53731 ChimerSeq STARFusion TCGA_RNA-Seq LGALS3BP-TG LGALS3BP chr17 76968290 - TG chr8 133981700 + Exonic hg19 THCA TCGA-DJ-A13O-01A 24 4 Out-of-frame Inter-chr q25.3 q24.22 53732 ChimerSeq STARFusion TCGA_RNA-Seq LOC400794-RXRG LOC400794 chr1 165543255 - RXRG chr1 165398203 - Exonic hg19 THCA TCGA-EM-A2CS-06A 3 15 3'UTR-CDS Intra-chr q23.3 Transcription factor 53733 ChimerSeq STARFusion TCGA_RNA-Seq NFIX-GNAS NFIX chr19 13106678 + GNAS chr20 57470667 + Exonic hg19 THCA TCGA-DJ-A2Q2-01A 2 2 Out-of-frame Inter-chr p13.13 Transcription factor q13.32 Oncogene 53734 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-FADS2 IGH@ chr14 106691671 - FADS2 chr11 61624391 + Exonic hg19 THCA TCGA-E8-A2EA-01A 12 1 Out-of-frame Inter-chr 32.33 q12.2 53735 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-FADS2 IGH@ chr14 106621895 - FADS2 chr11 61624388 + Exonic hg19 THCA TCGA-E8-A2EA-01A 11 1 Out-of-frame Inter-chr 32.33 q12.2 53736 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-ALK MALAT1 chr11 65269267 + ALK chr2 29451934 - Exonic hg19 THCA TCGA-DJ-A4UT-01A 123 2116 Out-of-frame Inter-chr q13.1 p23.1 TK:ALK Oncogene Seq+ 53737 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-ALK MALAT1 chr11 65266575 + ALK chr2 29451938 - Exonic hg19 THCA TCGA-DJ-A4UT-01A 95 2116 Out-of-frame Inter-chr q13.1 p23.1 TK:ALK Oncogene Seq+ 53738 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-ALK MALAT1 chr11 65266581 + ALK chr2 29451932 - Exonic hg19 THCA TCGA-DJ-A4UT-01A 87 2116 5'UTR-CDS Inter-chr q13.1 p23.1 TK:ALK Oncogene Seq+ 53739 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-ALK MALAT1 chr11 65269864 + ALK chr2 29451932 - Exonic hg19 THCA TCGA-DJ-A4UT-01A 47 2116 5'UTR-CDS Inter-chr q13.1 p23.1 TK:ALK Oncogene Seq+ 53740 ChimerSeq STARFusion TCGA_RNA-Seq MALAT1-ALK MALAT1 chr11 65268285 + ALK chr2 29451932 - Exonic hg19 THCA TCGA-DJ-A4UT-01A 15 2116 5'UTR-CDS Inter-chr q13.1 p23.1 TK:ALK Oncogene Seq+ 53741 ChimerSeq STARFusion TCGA_RNA-Seq EGLN2-IGH@ EGLN2 chr19 41305541 + IGH@ chr14 106134591 - Exonic hg19 THCA TCGA-ET-A4KN-01A 6 1 Out-of-frame Inter-chr q13.2 32.33 53742 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010683 - TTC18 chr10 75016175 - Exonic hg19 THCA TCGA-EL-A3CL-01A 48 260 Out-of-frame Intra-chr q22.2 53743 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010596 - TTC18 chr10 75016174 - Exonic hg19 THCA TCGA-EL-A3CL-01A 12 251 3'UTR-CDS Intra-chr q22.2 53744 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75010573 - TTC18 chr10 75016174 - Exonic hg19 THCA TCGA-EL-A3CL-01A 11 251 3'UTR-CDS Intra-chr q22.2 53745 ChimerSeq STARFusion TCGA_RNA-Seq MRPS16-TTC18 MRPS16 chr10 75011521 - TTC18 chr10 75016174 - Exonic hg19 THCA TCGA-EL-A3CL-01A 10 251 Out-of-frame Intra-chr q22.2 53746 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-EM-A3AN-01A 22 103 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 53747 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK6 PRSS1 chr7 142481912 + KLK6 chr19 51462572 - Exonic hg19 THCA TCGA-EM-A3AN-01A 29 1 3'UTR-CDS Inter-chr q13.41 Tumor suppressor gene 53748 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK6 PRSS1 chr7 142471340 + KLK6 chr19 51462572 - Exonic hg19 THCA TCGA-EM-A3AN-01A 12 1 3'UTR-CDS Inter-chr q13.41 Tumor suppressor gene 53749 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-FK-A3SE-01A 79 276 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 53750 ChimerSeq STARFusion TCGA_RNA-Seq TIMM23B-LINC00843 TIMM23B chr10 51387763 + LINC00843 chr10 51732772 + Exonic hg19 THCA TCGA-EM-A2P0-01A 9 36 Out-of-frame Intra-chr q11.23 q11.23 53751 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-DJ-A4UQ-01A 36 97 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 53752 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86351941 + Exonic hg19 THCA TCGA-FY-A3RA-01A 2 18 Out-of-frame Intra-chr q21.2 q21.2 53753 ChimerSeq STARFusion TCGA_RNA-Seq LOC407835-MAP2K2 LOC407835 chr7 128767116 + MAP2K2 chr19 4102445 - Exonic hg19 THCA TCGA-J8-A3O0-01A 3 4 Out-of-frame Inter-chr p13.3 STE:STE7 Oncogene 53754 ChimerSeq STARFusion TCGA_RNA-Seq PTCSC3-SFTA3 PTCSC3 chr14 36645504 - SFTA3 chr14 36960496 - Exonic hg19 THCA TCGA-FY-A3NM-01A 2 0 Out-of-frame Intra-chr q13.3 Tumor suppressor gene q13.3 53755 ChimerSeq STARFusion TCGA_RNA-Seq LRP8-RPL14 LRP8 chr1 53793534 - RPL14 chr3 40503521 + Exonic hg19 THCA TCGA-EL-A3MX-01A 8 5 Out-of-frame Inter-chr p32.3 p22.1 53756 ChimerSeq STARFusion TCGA_RNA-Seq LRP8-RPL14 LRP8 chr1 53793512 - RPL14 chr3 40503543 + Exonic hg19 THCA TCGA-EL-A3MX-01A 4 5 Out-of-frame Inter-chr p32.3 p22.1 53757 ChimerSeq STARFusion TCGA_RNA-Seq TG-IGH@ TG chr8 133995657 + IGH@ chr14 107283096 - Exonic hg19 THCA TCGA-DJ-A13M-01A 5 88 Out-of-frame Inter-chr q24.22 32.33 53758 ChimerSeq STARFusion TCGA_RNA-Seq TG-IGH@ TG chr8 134042268 + IGH@ chr14 107283096 - Exonic hg19 THCA TCGA-DJ-A13M-01A 4 53 Out-of-frame Inter-chr q24.22 32.33 53759 ChimerSeq STARFusion TCGA_RNA-Seq TG-IGH@ TG chr8 133961188 + IGH@ chr14 107283096 - Exonic hg19 THCA TCGA-DJ-A13M-01A 4 53 Out-of-frame Inter-chr q24.22 32.33 53760 ChimerSeq STARFusion TCGA_RNA-Seq TG-IGH@ TG chr8 134042268 + IGH@ chr14 106780817 - Exonic hg19 THCA TCGA-DJ-A13M-01A 2 53 Out-of-frame Inter-chr q24.22 32.33 53761 ChimerSeq STARFusion TCGA_RNA-Seq TG-IGH@ TG chr8 133984986 + IGH@ chr14 107083557 - Exonic hg19 THCA TCGA-DJ-A13M-01A 2 53 Out-of-frame Inter-chr q24.22 32.33 53762 ChimerSeq STARFusion TCGA_RNA-Seq TG-IGH@ TG chr8 134108617 + IGH@ chr14 107283096 - Exonic hg19 THCA TCGA-DJ-A13M-01A 2 53 Out-of-frame Inter-chr q24.22 32.33 53763 ChimerSeq STARFusion TCGA_RNA-Seq TG-DDX11L1 TG chr8 134042268 + DDX11L1 chr1 12613 + Exonic hg19 THCA TCGA-DJ-A13M-01A 2 17 CDS-3'UTR Inter-chr q24.22 p36.33 53764 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12006495 + NTRK3 chr15 88576276 - Exonic hg19 THCA TCGA-CE-A27D-01A 6 43 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 53765 ChimerSeq STARFusion TCGA_RNA-Seq AKAP13-RET AKAP13 chr15 86284726 + RET chr10 43612032 + Exonic hg19 THCA TCGA-FK-A3SG-01A 72 291 In-Frame Inter-chr q25.3 q11.21 TK:Ret Oncogene Seq+ 53766 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-CYSTM1 ANKHD1 chr5 139781858 + CYSTM1 chr5 139661082 + Exonic hg19 THCA TCGA-EM-A3FQ-01A 13 31 CDS-3'UTR Intra-chr q31.3 q31.3 53767 ChimerSeq STARFusion TCGA_RNA-Seq ERC1-RET ERC1 chr12 1553916 + RET chr10 43612032 + Exonic hg19 THCA TCGA-EM-A3FQ-01A 9 12 In-Frame Inter-chr q11.21 TK:Ret Oncogene KB Seq+ 53768 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK6 PRSS1 chr7 142481912 + KLK6 chr19 51462572 - Exonic hg19 THCA TCGA-FE-A238-01A 45 1 3'UTR-CDS Inter-chr q13.41 Tumor suppressor gene 53769 ChimerSeq STARFusion TCGA_RNA-Seq PRSS1-KLK6 PRSS1 chr7 142471340 + KLK6 chr19 51462572 - Exonic hg19 THCA TCGA-FE-A238-01A 17 1 3'UTR-CDS Inter-chr q13.41 Tumor suppressor gene 53770 ChimerSeq STARFusion TCGA_RNA-Seq IGHGP-TINAGL1 IGHGP chr14 106134591 - TINAGL1 chr1 32052503 + Exonic hg19 THCA TCGA-FE-A23A-01A 254 1 Out-of-frame Inter-chr p35.2 53771 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGHG1 HOMER2 chr15 83561493 - IGHG1 chr14 106209410 - Exonic hg19 THCA TCGA-FE-A23A-01A 21 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene q32.33 53772 ChimerSeq STARFusion TCGA_RNA-Seq HOMER2-IGHG1 HOMER2 chr15 83561493 - IGHG1 chr14 106237745 - Exonic hg19 THCA TCGA-FE-A23A-01A 16 1 Out-of-frame Inter-chr q25.2 Tumor suppressor gene q32.33 53773 ChimerSeq STARFusion TCGA_RNA-Seq CBX5-TXNRD2 CBX5 chr12 54635528 - TXNRD2 chr22 19918621 - Exonic hg19 THCA TCGA-FY-A3WA-01A 6 39 3'UTR-CDS Inter-chr q13.13 Tumor suppressor gene q11.21 Seq+ 53774 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-EL-A3TB-01A 54 119 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 53775 ChimerSeq STARFusion TCGA_RNA-Seq CDH1-TRADD CDH1 chr16 68772314 + TRADD chr16 67189557 - Exonic hg19 THCA TCGA-EM-A3FR-01A 2 2 In-Frame Intra-chr q22.1 Oncogene Tumor suppressor gene q22.1 53776 ChimerSeq STARFusion TCGA_RNA-Seq MET-TFG MET chr7 116412043 + TFG chr3 100455420 + Exonic hg19 THCA TCGA-FK-A3S3-01A 382 1870 In-Frame Inter-chr q31.2 TK:Met Oncogene q12.2 Seq+ 53777 ChimerSeq STARFusion TCGA_RNA-Seq TFG-MET TFG chr3 100451516 + MET chr7 116414935 + Exonic hg19 THCA TCGA-FK-A3S3-01A 3 26 In-Frame Inter-chr q12.2 q31.2 TK:Met Oncogene KB Pub Seq+ 53778 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86295183 + Exonic hg19 THCA TCGA-ET-A25K-01A 2 8 CDS-5'UTR Intra-chr q21.2 q21.2 53779 ChimerSeq STARFusion TCGA_RNA-Seq CNOT8-IGL@ CNOT8 chr5 154250167 + IGL@ chr22 23247175 + Exonic hg19 THCA TCGA-FY-A3R6-01A 67 0 Out-of-frame Inter-chr q33.2 q11.22 53780 ChimerSeq STARFusion TCGA_RNA-Seq CNOT8-IGLC3 CNOT8 chr5 154250167 + IGLC3 chr22 23247175 + Exonic hg19 THCA TCGA-FY-A3R6-01A 67 0 Out-of-frame Inter-chr q33.2 q11.22 53781 ChimerSeq STARFusion TCGA_RNA-Seq CNOT8-IGLJ3 CNOT8 chr5 154250167 + IGLJ3 chr22 23247175 + Exonic hg19 THCA TCGA-FY-A3R6-01A 67 0 Out-of-frame Inter-chr q33.2 q11.22 53782 ChimerSeq STARFusion TCGA_RNA-Seq UACA-LTK UACA chr15 70957001 - LTK chr15 41799372 - Exonic hg19 THCA TCGA-FY-A3R6-01A 9 74 Out-of-frame Intra-chr q23 q15.1 TK:ALK Oncogene Seq+ 53783 ChimerSeq STARFusion TCGA_RNA-Seq CLU-IGKC CLU chr8 27455633 - IGKC chr2 89156856 - Exonic hg19 THCA TCGA-FY-A3R6-01A 3 17 Out-of-frame Inter-chr p21.1 Tumor suppressor gene p11.2 53784 ChimerSeq STARFusion TCGA_RNA-Seq NRL-IGL@ NRL chr14 24584149 - IGL@ chr22 23241803 + Exonic hg19 THCA TCGA-FY-A3R6-01A 7 1 Out-of-frame Inter-chr q12 Transcription factor q11.22 53785 ChimerSeq STARFusion TCGA_RNA-Seq NRL-IGLC2 NRL chr14 24584149 - IGLC2 chr22 23241803 + Exonic hg19 THCA TCGA-FY-A3R6-01A 7 1 Out-of-frame Inter-chr q12 Transcription factor q11.22 53786 ChimerSeq STARFusion TCGA_RNA-Seq KIF1B-IGKC KIF1B chr1 10437019 + IGKC chr2 89160435 - Exonic hg19 THCA TCGA-E8-A2JQ-01A 13 1 Out-of-frame Inter-chr p36.22 Tumor suppressor gene p11.2 53787 ChimerSeq STARFusion TCGA_RNA-Seq C1QA-IGHG3 C1QA chr1 22964182 + IGHG3 chr14 106330056 - Exonic hg19 THCA TCGA-E8-A2JQ-01A 8 1 Out-of-frame Inter-chr p36.12 53788 ChimerSeq STARFusion TCGA_RNA-Seq C1QA-IGHJ5 C1QA chr1 22964180 + IGHJ5 chr14 106330058 - Exonic hg19 THCA TCGA-E8-A2JQ-01A 8 1 Out-of-frame Inter-chr p36.12 53789 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-EEFSEC IGL@ chr22 23165776 + EEFSEC chr3 128127054 + Exonic hg19 THCA TCGA-E8-A2JQ-01A 8 1 Out-of-frame Inter-chr q11.22 q21.3 53790 ChimerSeq STARFusion TCGA_RNA-Seq CHP1-IGHG1 CHP1 chr15 41523545 + IGHG1 chr14 106209407 - Exonic hg19 THCA TCGA-E8-A2JQ-01A 6 1 Out-of-frame Inter-chr q15.1 q32.33 53791 ChimerSeq STARFusion TCGA_RNA-Seq TG-LOC729444 TG chr8 134042268 + LOC729444 chr22 20328520 + Exonic hg19 THCA TCGA-EM-A3FP-01A 23 147 CDS-5'UTR Inter-chr q24.22 53792 ChimerSeq STARFusion TCGA_RNA-Seq TG-CYP4F24P TG chr8 133895244 + CYP4F24P chr19 15871707 - Exonic hg19 THCA TCGA-EM-A3FP-01A 26 28 CDS-3'UTR Inter-chr q24.22 p13.12 53793 ChimerSeq STARFusion TCGA_RNA-Seq VCL-FGFR2 VCL chr10 75758133 + FGFR2 chr10 123239535 - Exonic hg19 THCA TCGA-EM-A3FP-01A 13 23 In-Frame Intra-chr q22.2 q26.13 TK:FGFR Oncogene Seq+ 53794 ChimerSeq STARFusion TCGA_RNA-Seq RAD23A-CALR RAD23A chr19 13060222 + CALR chr19 13049948 + Exonic hg19 THCA TCGA-DJ-A2Q4-01A 2 7 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 53795 ChimerSeq STARFusion TCGA_RNA-Seq FGFR2-OFD1 FGFR2 chr10 123243212 - OFD1 chrX 13754597 + Exonic hg19 THCA TCGA-BJ-A0Z0-01A 38 98 In-Frame Inter-chr q26.13 TK:FGFR Oncogene p22.2 Seq+ 53796 ChimerSeq STARFusion TCGA_RNA-Seq FKBP15-RET FKBP15 chr9 115932802 - RET chr10 43612032 + Exonic hg19 THCA TCGA-ET-A3DQ-01A 3 22 In-Frame Inter-chr q32 q11.21 TK:Ret Oncogene Seq+ 53797 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12006495 + NTRK3 chr15 88576276 - Exonic hg19 THCA TCGA-E8-A438-01A 7 18 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 53798 ChimerSeq STARFusion TCGA_RNA-Seq NTRK3-ETV6 NTRK3 chr15 88669502 - ETV6 chr12 12022358 + Exonic hg19 THCA TCGA-E8-A438-01A 3 10 In-Frame Inter-chr q25.3 Oncogene Tumor suppressor gene p13.2 Tumor suppressor gene Transcription factor KB Seq+ 53799 ChimerSeq STARFusion TCGA_RNA-Seq NCOR1-RHOU NCOR1 chr17 16097776 - RHOU chr1 228873420 + Exonic hg19 THCA TCGA-EM-A2OX-01A 28 52 Out-of-frame Inter-chr p11.2 Oncogene q42.13 Seq+ 53800 ChimerSeq STARFusion TCGA_RNA-Seq DLG5-RET DLG5 chr10 79588640 - RET chr10 43612032 + Exonic hg19 THCA TCGA-DE-A69K-01A 50 191 In-Frame Intra-chr q22.3 q11.21 TK:Ret Oncogene Seq+ 53801 ChimerSeq STARFusion TCGA_RNA-Seq ADNP2-RBFADN ADNP2 chr18 77867356 + RBFADN chr18 77837589 + Exonic hg19 THCA TCGA-DE-A69K-01A 12 23 Out-of-frame Intra-chr q23 Transcription factor q23 53802 ChimerSeq STARFusion TCGA_RNA-Seq BRAF-SND1 BRAF chr7 140494108 - SND1 chr7 127714554 + Exonic hg19 THCA TCGA-KS-A41I-01A 2 1 In-Frame Intra-chr q34 TKL:RAF Oncogene q32.1 Seq+ 53803 ChimerSeq STARFusion TCGA_RNA-Seq ERRFI1-CACNA1E ERRFI1 chr1 8086218 - CACNA1E chr1 181546902 + Exonic hg19 THCA TCGA-4C-A93U-01A 6 10 5'UTR-CDS Intra-chr p36.23 Tumor suppressor gene q25.3 Seq+ 53804 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-RPS15A IGH@ chr14 106815720 - RPS15A chr16 18794215 - Exonic hg19 THCA TCGA-ET-A39M-01A 15 2 Out-of-frame Inter-chr 32.33 p12.3 53805 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-EEF1G IGL@ chr22 23117157 + EEF1G chr11 62340939 - Exonic hg19 THCA TCGA-ET-A39M-01A 8 2 Out-of-frame Inter-chr q11.22 q12.3 53806 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-MIR3654 IGL@ chr22 23117157 + MIR3654 chr11 62340939 - Exonic hg19 THCA TCGA-ET-A39M-01A 8 2 Out-of-frame Inter-chr q11.22 q33 53807 ChimerSeq STARFusion TCGA_RNA-Seq SPECC1L-RET SPECC1L chr22 24734445 + RET chr10 43612032 + Exonic hg19 THCA TCGA-CE-A485-01A 13 57 In-Frame Inter-chr q11.23 q11.21 TK:Ret Oncogene Seq+ 53808 ChimerSeq STARFusion TCGA_RNA-Seq ZNF740-SEPT9 ZNF740 chr12 53584281 + SEPT9 chr17 75494788 + Exonic hg19 THCA TCGA-CE-A485-01A 4 0 Out-of-frame Inter-chr q13.13 Transcription factor 53809 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12006495 + NTRK3 chr15 88576276 - Exonic hg19 THCA TCGA-EL-A3ZN-01A 7 19 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 53810 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86295183 + Exonic hg19 THCA TCGA-EL-A4K4-01A 2 15 CDS-5'UTR Intra-chr q21.2 q21.2 53811 ChimerSeq STARFusion TCGA_RNA-Seq TG-SAT1 TG chr8 133961188 + SAT1 chrX 23803445 + Exonic hg19 THCA TCGA-EM-A4FV-01A 2 2 In-Frame Inter-chr q24.22 p22.11 53812 ChimerSeq STARFusion TCGA_RNA-Seq NCOA4-RET NCOA4 chr10 51582939 + RET chr10 43612032 + Exonic hg19 THCA TCGA-EM-A2CU-01A 23 171 In-Frame Intra-chr q11.22 Oncogene Tumor suppressor gene q11.21 TK:Ret Oncogene KB Pub Seq+ 53813 ChimerSeq STARFusion TCGA_RNA-Seq LOC100288778-WASH3P LOC100288778 chr12 89017 + WASH3P chr15 102515209 + Exonic hg19 THCA TCGA-DJ-A3UQ-01A 3 2 Out-of-frame Inter-chr q26.3 53814 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12006495 + NTRK3 chr15 88576276 - Exonic hg19 THCA TCGA-DJ-A4V0-01A 4 15 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 53815 ChimerSeq STARFusion TCGA_RNA-Seq TIMM23B-LINC00843 TIMM23B chr10 51387763 + LINC00843 chr10 51732772 + Exonic hg19 THCA TCGA-ET-A25O-01A 13 26 Out-of-frame Intra-chr q11.23 q11.23 53816 ChimerSeq STARFusion TCGA_RNA-Seq NUP188-PHYHD1 NUP188 chr9 131711522 + PHYHD1 chr9 131698727 + Exonic hg19 THCA TCGA-FE-A3PA-01A 32 93 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 53817 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-DJ-A4V5-01A 43 98 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 53818 ChimerSeq STARFusion TCGA_RNA-Seq EFCAB2-KIF26B EFCAB2 chr1 245246990 + KIF26B chr1 245530136 + Exonic hg19 THCA TCGA-IM-A3ED-01A 2 0 Out-of-frame Intra-chr q44 53819 ChimerSeq STARFusion TCGA_RNA-Seq VARS2-TG VARS2 chr6 30882390 + TG chr8 133981700 + Exonic hg19 THCA TCGA-ET-A3DS-01A 8 2 Out-of-frame Inter-chr q24.22 53820 ChimerSeq STARFusion TCGA_RNA-Seq TG-NDUFB2 TG chr8 133885466 + NDUFB2 chr7 140402666 + Exonic hg19 THCA TCGA-ET-A3DS-01A 2 7 In-Frame Inter-chr q24.22 q34 53821 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-J8-A4HW-01A 24 147 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 53822 ChimerSeq STARFusion TCGA_RNA-Seq INTS3-CHTOP INTS3 chr1 153730239 + CHTOP chr1 153614722 + Exonic hg19 THCA TCGA-EM-A3FO-01A 18 73 In-Frame Intra-chr q21.3 q21.3 KB Pub Seq+ 53823 ChimerSeq STARFusion TCGA_RNA-Seq INTS3-CHTOP INTS3 chr1 153730239 + CHTOP chr1 153614719 + Exonic hg19 THCA TCGA-EM-A3FO-01A 15 73 In-Frame Intra-chr q21.3 q21.3 KB Pub Seq+ 53824 ChimerSeq STARFusion TCGA_RNA-Seq NFIX-GATAD2A NFIX chr19 13184840 + GATAD2A chr19 19603115 + Exonic hg19 THCA TCGA-FY-A2QD-01A 10 29 In-Frame Intra-chr p13.13 Transcription factor p13.11 Transcription factor Seq+ 53825 ChimerSeq STARFusion TCGA_RNA-Seq TG-CPQ TG chr8 134042268 + CPQ chr8 98041631 + Exonic hg19 THCA TCGA-FY-A2QD-01A 2 10 Out-of-frame Intra-chr q24.22 q22.1 53826 ChimerSeq STARFusion TCGA_RNA-Seq AGGF1-RAF1 AGGF1 chr5 76335544 + RAF1 chr3 12641914 - Exonic hg19 THCA TCGA-EM-A1CS-01A 9 41 In-Frame Inter-chr q13.3 p25.2 TKL:RAF Oncogene Seq+ 53827 ChimerSeq STARFusion TCGA_RNA-Seq LOC400794-RXRG LOC400794 chr1 165543255 - RXRG chr1 165398203 - Exonic hg19 THCA TCGA-EM-A1CS-01A 5 11 3'UTR-CDS Intra-chr q23.3 Transcription factor 53828 ChimerSeq STARFusion TCGA_RNA-Seq RREB1-KIF13A RREB1 chr6 7189555 + KIF13A chr6 17765177 - Exonic hg19 THCA TCGA-ET-A39S-01A 2 0 Out-of-frame Intra-chr p24.3 Transcription factor p22.3 53829 ChimerSeq STARFusion TCGA_RNA-Seq TIMM23B-LINC00843 TIMM23B chr10 51387763 + LINC00843 chr10 51732772 + Exonic hg19 THCA TCGA-ET-A25J-01A 9 31 Out-of-frame Intra-chr q11.23 q11.23 53830 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-TINAGL1 IGHG1 chr14 106134591 - TINAGL1 chr1 32052503 + Exonic hg19 THCA TCGA-E8-A44M-01A 35 1 Out-of-frame Inter-chr q32.33 p35.2 53831 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-E8-A44M-01A 16 72 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 53832 ChimerSeq STARFusion TCGA_RNA-Seq CLU-IGKC CLU chr8 27462558 - IGKC chr2 89156858 - Exonic hg19 THCA TCGA-E8-A44M-01A 3 59 Out-of-frame Inter-chr p21.1 Tumor suppressor gene p11.2 53833 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-TG IGL@ chr22 22764611 + TG chr8 133900729 + Exonic hg19 THCA TCGA-E8-A44M-01A 3 42 Out-of-frame Inter-chr q11.22 q24.22 53834 ChimerSeq STARFusion TCGA_RNA-Seq ORAOV1-IGKC ORAOV1 chr11 69481893 - IGKC chr2 89161431 - Exonic hg19 THCA TCGA-E8-A44M-01A 12 1 Out-of-frame Inter-chr q13.3 p11.2 53835 ChimerSeq STARFusion TCGA_RNA-Seq ATPIF1-IGH@ ATPIF1 chr1 28564178 + IGH@ chr14 106330466 - Exonic hg19 THCA TCGA-E8-A44M-01A 8 2 Out-of-frame Inter-chr p35.3 32.33 53836 ChimerSeq STARFusion TCGA_RNA-Seq KLF9-IGL@ KLF9 chr9 73002485 - IGL@ chr22 23235965 + Exonic hg19 THCA TCGA-E8-A44M-01A 8 1 Out-of-frame Inter-chr q21.12 Transcription factor q11.22 53837 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB2-IGKC DNAJB2 chr2 220151425 + IGKC chr2 89156807 - Exonic hg19 THCA TCGA-E8-A44M-01A 7 1 Out-of-frame Intra-chr q35 p11.2 53838 ChimerSeq STARFusion TCGA_RNA-Seq ANK3-CCDC6 ANK3 chr10 61815416 - CCDC6 chr10 61612460 - Exonic hg19 THCA TCGA-E8-A44M-01A 3 13 In-Frame Intra-chr q21.2 q21.2 Seq+ 53839 ChimerSeq STARFusion TCGA_RNA-Seq EEF1A1-FN1 EEF1A1 chr6 74228278 - FN1 chr2 216242985 - Exonic hg19 THCA TCGA-EL-A3CT-01A 3 74 In-Frame Inter-chr q13 Tumor suppressor gene q35 Oncogene 53840 ChimerSeq STARFusion TCGA_RNA-Seq FN1-ACTB FN1 chr2 216283983 - ACTB chr7 5567685 - Exonic hg19 THCA TCGA-EL-A3CT-01A 3 17 Out-of-frame Inter-chr q35 Oncogene p22.1 53841 ChimerSeq STARFusion TCGA_RNA-Seq TFG-NTRK1 TFG chr3 100455560 + NTRK1 chr1 156844363 + Exonic hg19 THCA TCGA-EM-A3AO-01A 39 102 In-Frame Inter-chr q12.2 q23.1 Oncogene KB Pub Seq+ 53842 ChimerSeq STARFusion TCGA_RNA-Seq TFG-NTRK1 TFG chr3 100455548 + NTRK1 chr1 156844363 + Exonic hg19 THCA TCGA-EM-A3AO-01A 10 99 In-Frame Inter-chr q12.2 q23.1 Oncogene KB Pub Seq+ 53843 ChimerSeq STARFusion TCGA_RNA-Seq TSIX-CALR TSIX chrX 73047476 + CALR chr19 13054525 + Exonic hg19 THCA TCGA-H2-A3RH-01A 3 9 Out-of-frame Inter-chr q13.2 p13.13 53844 ChimerSeq STARFusion TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12006495 + NTRK3 chr15 88576276 - Exonic hg19 THCA TCGA-DJ-A3UV-01A 8 44 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 53845 ChimerSeq STARFusion TCGA_RNA-Seq STRN-ALK STRN chr2 37143221 - ALK chr2 29446394 - Exonic hg19 THCA TCGA-DJ-A3US-01A 10 18 In-Frame Intra-chr p22.2 p23.1 TK:ALK Oncogene KB Pub Seq+ 53846 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86193868 + CA3 chr8 86351941 + Exonic hg19 THCA TCGA-DJ-A3US-01A 3 12 3'UTR-CDS Intra-chr q21.2 q21.2 53847 ChimerSeq STARFusion TCGA_RNA-Seq IRF2BP2-NTRK1 IRF2BP2 chr1 234744241 - NTRK1 chr1 156844363 + Exonic hg19 THCA TCGA-DJ-A4UP-01A 17 369 In-Frame Intra-chr q42.3 q23.1 Oncogene Seq+ 53848 ChimerSeq STARFusion TCGA_RNA-Seq IRF2BP2-NTRK1 IRF2BP2 chr1 234744244 - NTRK1 chr1 156844360 + Exonic hg19 THCA TCGA-DJ-A4UP-01A 15 368 Out-of-frame Intra-chr q42.3 q23.1 Oncogene Seq+ 53849 ChimerSeq STARFusion TCGA_RNA-Seq IRF2BP2-NTRK1 IRF2BP2 chr1 234744193 - NTRK1 chr1 156844363 + Exonic hg19 THCA TCGA-DJ-A4UP-01A 5 368 In-Frame Intra-chr q42.3 q23.1 Oncogene Seq+ 53850 ChimerSeq STARFusion TCGA_RNA-Seq PRKAR1B-IGH@ PRKAR1B chr7 731330 - IGH@ chr14 106331653 - Exonic hg19 THCA TCGA-DJ-A3V2-01A 50 1 Out-of-frame Inter-chr p22.3 32.33 53851 ChimerSeq STARFusion TCGA_RNA-Seq JUP-IGKC JUP chr17 39914020 - IGKC chr2 89161430 - Exonic hg19 THCA TCGA-DJ-A3V2-01A 15 2 Out-of-frame Inter-chr q21.2 Tumor suppressor gene p11.2 53852 ChimerSeq STARFusion TCGA_RNA-Seq RPS27A-IGKC RPS27A chr2 55462040 + IGKC chr2 89161435 - Exonic hg19 THCA TCGA-DJ-A3V2-01A 9 1 Out-of-frame Intra-chr p16.1 p11.2 53853 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB2-IGKC DNAJB2 chr2 220151425 + IGKC chr2 89156807 - Exonic hg19 THCA TCGA-DJ-A3V2-01A 8 3 Out-of-frame Intra-chr q35 p11.2 53854 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86351941 + Exonic hg19 THCA TCGA-DJ-A3V2-01A 2 8 Out-of-frame Intra-chr q21.2 q21.2 53855 ChimerSeq STARFusion TCGA_RNA-Seq CLU-TESC CLU chr8 27455977 - TESC chr12 117536326 - Exonic hg19 THCA TCGA-EL-A3T6-01A 65 1 3'UTR-3'UTR Inter-chr p21.1 Tumor suppressor gene q24.22 53856 ChimerSeq STARFusion TCGA_RNA-Seq CLU-IGKC CLU chr8 27462558 - IGKC chr2 89156858 - Exonic hg19 THCA TCGA-EL-A3T6-01A 3 34 Out-of-frame Inter-chr p21.1 Tumor suppressor gene p11.2 53857 ChimerSeq STARFusion TCGA_RNA-Seq CMTR1-ZFAND3 CMTR1 chr6 37445415 + ZFAND3 chr6 38120011 + Exonic hg19 THCA TCGA-DE-A4MA-01A 2 12 Out-of-frame Intra-chr p21.2 p21.2 Seq+ 53858 ChimerSeq STARFusion TCGA_RNA-Seq WARS-CCNY WARS chr14 100828045 - CCNY chr10 35772332 + Exonic hg19 THCA TCGA-EM-A3AQ-01A 4 16 In-Frame Inter-chr q32.2 p11.21 Seq+ 53859 ChimerSeq STARFusion TCGA_RNA-Seq PAX8-NFE2L2 PAX8 chr2 113999128 - NFE2L2 chr2 178097311 - Exonic hg19 THCA TCGA-EM-A2CP-01A 84 562 In-Frame Intra-chr q14.1 Oncogene Transcription factor q31.2 Oncogene Transcription factor KB Pub Seq+ 53860 ChimerSeq STARFusion TCGA_RNA-Seq CHP1-IGH@ CHP1 chr15 41523545 + IGH@ chr14 106209407 - Exonic hg19 THCA TCGA-EM-A2CP-01A 34 1 Out-of-frame Inter-chr q15.1 32.33 53861 ChimerSeq STARFusion TCGA_RNA-Seq CHP1-IGH@ CHP1 chr15 41523544 + IGH@ chr14 106136182 - Exonic hg19 THCA TCGA-EM-A2CP-01A 30 1 Out-of-frame Inter-chr q15.1 32.33 53862 ChimerSeq STARFusion TCGA_RNA-Seq CHP1-IGHG2 CHP1 chr15 41523545 + IGHG2 chr14 106111126 - Exonic hg19 THCA TCGA-EM-A2CP-01A 30 1 Out-of-frame Inter-chr q15.1 53863 ChimerSeq STARFusion TCGA_RNA-Seq CHP1-IGHG2 CHP1 chr15 41523544 + IGHG2 chr14 106209408 - Exonic hg19 THCA TCGA-EM-A2CP-01A 26 1 Out-of-frame Inter-chr q15.1 53864 ChimerSeq STARFusion TCGA_RNA-Seq MDH2-IGHG3 MDH2 chr7 75689771 + IGHG3 chr14 106330057 - Exonic hg19 THCA TCGA-EM-A2CP-01A 17 1 Out-of-frame Inter-chr q11.23 53865 ChimerSeq STARFusion TCGA_RNA-Seq KIDINS220-IGHG2 KIDINS220 chr2 8977674 - IGHG2 chr14 106111129 - Exonic hg19 THCA TCGA-EM-A2CP-01A 13 1 Out-of-frame Inter-chr p25.1 53866 ChimerSeq STARFusion TCGA_RNA-Seq FGFR1-IGHG1 FGFR1 chr8 38277143 - IGHG1 chr14 106209410 - Exonic hg19 THCA TCGA-EM-A2CP-01A 11 1 Out-of-frame Inter-chr p11.23 TK:FGFR Oncogene q32.33 53867 ChimerSeq STARFusion TCGA_RNA-Seq MDH2-IGHG3 MDH2 chr7 75689771 + IGHG3 chr14 106331650 - Exonic hg19 THCA TCGA-EM-A2CP-01A 10 1 Out-of-frame Inter-chr q11.23 53868 ChimerSeq STARFusion TCGA_RNA-Seq SOAT2-IGHG1 SOAT2 chr12 53517616 + IGHG1 chr14 106209410 - Exonic hg19 THCA TCGA-EM-A2CP-01A 10 0 Out-of-frame Inter-chr q13.13 q32.33 53869 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-IGHG1 GAS6 chr13 114525073 - IGHG1 chr14 106209411 - Exonic hg19 THCA TCGA-EM-A2CP-01A 9 2 Out-of-frame Inter-chr q34 Oncogene q32.33 53870 ChimerSeq STARFusion TCGA_RNA-Seq KRT18P17-IGHGP KRT18P17 chr3 12830065 - IGHGP chr14 106136186 - Exonic hg19 THCA TCGA-EM-A2CP-01A 9 1 Out-of-frame Inter-chr p25.2 53871 ChimerSeq STARFusion TCGA_RNA-Seq NRBP1-IGHG1 NRBP1 chr2 27664674 + IGHG1 chr14 106209410 - Exonic hg19 THCA TCGA-EM-A2CP-01A 9 1 Out-of-frame Inter-chr p23.3 Other:NRBP Tumor suppressor gene q32.33 53872 ChimerSeq STARFusion TCGA_RNA-Seq YY1-IGHG1 YY1 chr14 100706045 + IGHG1 chr14 106209409 - Exonic hg19 THCA TCGA-EM-A2CP-01A 8 2 Out-of-frame Intra-chr q32.2 Transcription factor q32.33 53873 ChimerSeq STARFusion TCGA_RNA-Seq PKD1P1-IGHG4 PKD1P1 chr16 16414656 + IGHG4 chr14 106092405 - Exonic hg19 THCA TCGA-EM-A2CP-01A 8 1 Out-of-frame Inter-chr 53874 ChimerSeq STARFusion TCGA_RNA-Seq YY1-IGHG1 YY1 chr14 100706049 + IGHG1 chr14 106237740 - Exonic hg19 THCA TCGA-EM-A2CP-01A 7 2 Out-of-frame Intra-chr q32.2 Transcription factor q32.33 53875 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB2-IGKC DNAJB2 chr2 220151425 + IGKC chr2 89156807 - Exonic hg19 THCA TCGA-E8-A419-01A 11 1 Out-of-frame Intra-chr q35 p11.2 53876 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPL-IGKC HNRNPL chr19 39331101 - IGKC chr2 89161070 - Exonic hg19 THCA TCGA-E8-A419-01A 8 1 Out-of-frame Inter-chr p11.2 53877 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB2-IGKC DNAJB2 chr2 220151425 + IGKC chr2 89156807 - Exonic hg19 THCA TCGA-DJ-A3VL-01A 6 2 Out-of-frame Intra-chr q35 p11.2 53878 ChimerSeq STARFusion TCGA_RNA-Seq NCOA4-RET NCOA4 chr10 51582939 + RET chr10 43612032 + Exonic hg19 THCA TCGA-CE-A482-01A 31 145 In-Frame Intra-chr q11.22 Oncogene Tumor suppressor gene q11.21 TK:Ret Oncogene KB Pub Seq+ 53879 ChimerSeq STARFusion TCGA_RNA-Seq RET-NCOA4 RET chr10 43610184 + NCOA4 chr10 51584616 + Exonic hg19 THCA TCGA-CE-A482-01A 2 11 In-Frame Intra-chr q11.21 TK:Ret Oncogene q11.22 Oncogene Tumor suppressor gene KB Pub Seq+ 53880 ChimerSeq STARFusion TCGA_RNA-Seq PAN3-N4BP2L2 PAN3 chr13 28752072 + N4BP2L2 chr13 33018263 - Exonic hg19 THCA TCGA-DJ-A2Q6-01A 2 1 Out-of-frame Intra-chr q12.2 q13.1 53881 ChimerSeq STARFusion TCGA_RNA-Seq ACAT2-IGHG1 ACAT2 chr6 160183157 + IGHG1 chr14 106209409 - Exonic hg19 THCA TCGA-EM-A1CW-01A 10 1 Out-of-frame Inter-chr q25.3 q32.33 53882 ChimerSeq STARFusion TCGA_RNA-Seq ACAT2-IGHG1 ACAT2 chr6 160183157 + IGHG1 chr14 106237744 - Exonic hg19 THCA TCGA-EM-A1CW-01A 9 1 Out-of-frame Inter-chr q25.3 q32.33 53883 ChimerSeq STARFusion TCGA_RNA-Seq LOC400794-RXRG LOC400794 chr1 165543255 - RXRG chr1 165398203 - Exonic hg19 THCA TCGA-J8-A42S-01A 4 19 3'UTR-CDS Intra-chr q23.3 Transcription factor 53884 ChimerSeq STARFusion TCGA_RNA-Seq PAX8-PPARG PAX8 chr2 113992971 - PPARG chr3 12421203 + Exonic hg19 THCA TCGA-DE-A4M9-01A 113 768 In-Frame Inter-chr q14.1 Oncogene Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 53885 ChimerSeq STARFusion TCGA_RNA-Seq PPARG-PAX8 PPARG chr3 12353952 + PAX8 chr2 113984833 - Exonic hg19 THCA TCGA-DE-A4M9-01A 6 40 5'UTR-CDS Inter-chr p25.2 Oncogene Tumor suppressor gene Transcription factor q14.1 Oncogene Transcription factor KB Seq+ 53886 ChimerSeq STARFusion TCGA_RNA-Seq PPARG-PAX8 PPARG chr3 12329519 + PAX8 chr2 113984833 - Exonic hg19 THCA TCGA-DE-A4M9-01A 4 40 5'UTR-CDS Inter-chr p25.2 Oncogene Tumor suppressor gene Transcription factor q14.1 Oncogene Transcription factor KB Seq+ 53887 ChimerSeq STARFusion TCGA_RNA-Seq PPARG-PAX8 PPARG chr3 12329174 + PAX8 chr2 113984833 - Exonic hg19 THCA TCGA-DE-A4M9-01A 2 40 5'UTR-CDS Inter-chr p25.2 Oncogene Tumor suppressor gene Transcription factor q14.1 Oncogene Transcription factor KB Seq+ 53888 ChimerSeq STARFusion TCGA_RNA-Seq GANAB-INTS5 GANAB chr11 62414034 - INTS5 chr11 62417471 - Exonic hg19 THCA TCGA-MK-A4N6-01A 17 1 In-Frame Intra-chr q12.3 Tumor suppressor gene q12.3 53889 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-DJ-A2Q1-01A 2 23 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 53890 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86351941 + Exonic hg19 THCA TCGA-E3-A3E3-01A 3 8 Out-of-frame Intra-chr q21.2 q21.2 53891 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-GALK1 IGL@ chr22 23165782 + GALK1 chr17 73754627 - Exonic hg19 THCA TCGA-BJ-A45E-01A 7 0 Out-of-frame Inter-chr q11.22 q25.1 53892 ChimerSeq STARFusion TCGA_RNA-Seq NTRK3-RBPMS NTRK3 chr15 88669502 - RBPMS chr8 30402011 + Exonic hg19 THCA TCGA-ET-A39L-01A 47 182 In-Frame Inter-chr q25.3 Oncogene Tumor suppressor gene p12 Seq+ 53893 ChimerSeq STARFusion TCGA_RNA-Seq RBPMS-NTRK3 RBPMS chr8 30361953 + NTRK3 chr15 88576276 - Exonic hg19 THCA TCGA-ET-A39L-01A 19 108 In-Frame Inter-chr p12 q25.3 Oncogene Tumor suppressor gene Seq+ 53894 ChimerSeq STARFusion TCGA_RNA-Seq RBPMS-NTRK3 RBPMS chr8 30361953 + NTRK3 chr15 88616138 - Exonic hg19 THCA TCGA-ET-A39L-01A 2 107 Out-of-frame Inter-chr p12 q25.3 Oncogene Tumor suppressor gene Seq+ 53895 ChimerSeq STARFusion TCGA_RNA-Seq NAIP-OCLN NAIP chr5 70269956 - OCLN chr5 68830521 + Exonic hg19 THCA TCGA-ET-A39L-01A 3 7 Out-of-frame Intra-chr q13.2 q13.2 53896 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1217-FN1 KIAA1217 chr10 24813479 + FN1 chr2 216240443 - Exonic hg19 THCA TCGA-EM-A2P1-01A 3 1 Out-of-frame Inter-chr p12.2 q35 Oncogene 53897 ChimerSeq STARFusion TCGA_RNA-Seq AK8-C9orf9 AK8 chr9 135753789 - C9orf9 chr9 135759299 + Exonic hg19 THCA TCGA-EL-A4K7-01A 3 1 Out-of-frame Intra-chr q34.13 53898 ChimerSeq STARFusion TCGA_RNA-Seq ERC1-RET ERC1 chr12 1346070 + RET chr10 43612032 + Exonic hg19 THCA TCGA-EL-A3T9-01A 9 30 In-Frame Inter-chr q11.21 TK:Ret Oncogene KB Seq+ 53899 ChimerSeq STARFusion TCGA_RNA-Seq SHROOM3-IGL@ SHROOM3 chr4 77480554 + IGL@ chr22 23237554 + Exonic hg19 THCA TCGA-EL-A4JX-01A 114 1 Out-of-frame Inter-chr q21.1 q11.22 53900 ChimerSeq STARFusion TCGA_RNA-Seq SHROOM3-IGLC1 SHROOM3 chr4 77480554 + IGLC1 chr22 23237554 + Exonic hg19 THCA TCGA-EL-A4JX-01A 114 1 Out-of-frame Inter-chr q21.1 q11.22 53901 ChimerSeq STARFusion TCGA_RNA-Seq SHROOM3-IGLL5 SHROOM3 chr4 77480554 + IGLL5 chr22 23237554 + Exonic hg19 THCA TCGA-EL-A4JX-01A 114 1 Out-of-frame Inter-chr q21.1 q11.22 53902 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB2-IGKC DNAJB2 chr2 220151425 + IGKC chr2 89156807 - Exonic hg19 THCA TCGA-EL-A4JX-01A 11 1 Out-of-frame Intra-chr q35 p11.2 53903 ChimerSeq STARFusion TCGA_RNA-Seq IQGAP1-IGHG3 IQGAP1 chr15 91017421 + IGHG3 chr14 106329465 - Exonic hg19 THCA TCGA-EL-A4JX-01A 7 1 Out-of-frame Inter-chr q26.1 53904 ChimerSeq STARFusion TCGA_RNA-Seq LAMP1-IGHG3 LAMP1 chr13 113976698 + IGHG3 chr14 106329467 - Exonic hg19 THCA TCGA-EL-A4JX-01A 6 1 Out-of-frame Inter-chr q34 Oncogene 53905 ChimerSeq STARFusion TCGA_RNA-Seq NRBP2-IGKC NRBP2 chr8 144916319 - IGKC chr2 89160770 - Exonic hg19 THCA TCGA-EL-A4JX-01A 6 1 Out-of-frame Inter-chr q24.3 Other:NRBP p11.2 53906 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-CYSTM1 ANKHD1 chr5 139781858 + CYSTM1 chr5 139661082 + Exonic hg19 THCA TCGA-EM-A3FQ-06A 22 37 CDS-3'UTR Intra-chr q31.3 q31.3 53907 ChimerSeq STARFusion TCGA_RNA-Seq TPM3-NTRK1 TPM3 chr1 154142876 - NTRK1 chr1 156844363 + Exonic hg19 THCA TCGA-EL-A3D4-01A 70 219 In-Frame Intra-chr q21.3 q23.1 Oncogene KB Pub Seq+ 53908 ChimerSeq STARFusion TCGA_RNA-Seq TG-OPA1 TG chr8 133980213 + OPA1 chr3 193377319 + Exonic hg19 THCA TCGA-EL-A3D4-01A 11 1 Out-of-frame Inter-chr q24.22 q29 53909 ChimerSeq STARFusion TCGA_RNA-Seq NCOA4-RET NCOA4 chr10 51582939 + RET chr10 43612032 + Exonic hg19 THCA TCGA-EL-A3H3-01A 21 95 In-Frame Intra-chr q11.22 Oncogene Tumor suppressor gene q11.21 TK:Ret Oncogene KB Pub Seq+ 53910 ChimerSeq STARFusion TCGA_RNA-Seq VPS8-EIF4G1 VPS8 chr3 184530013 + EIF4G1 chr3 184049054 + Exonic hg19 THCA TCGA-EL-A3H3-01A 17 18 5'UTR-CDS Intra-chr q27.2 q27.1 Seq+ 53911 ChimerSeq STARFusion TCGA_RNA-Seq CLN6-IGKC CLN6 chr15 68549340 - IGKC chr2 89161428 - Exonic hg19 THCA TCGA-KS-A4ID-01A 45 1 Out-of-frame Inter-chr q23 p11.2 53912 ChimerSeq STARFusion TCGA_RNA-Seq ZC3HAV1-BRAF ZC3HAV1 chr7 138758602 - BRAF chr7 140481493 - Exonic hg19 THCA TCGA-KS-A4ID-01A 3 16 In-Frame Intra-chr q34 q34 TKL:RAF Oncogene Seq+ 53913 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-ET-A40T-01A 26 92 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 53914 ChimerSeq STARFusion TCGA_RNA-Seq C22orf39-IGHG4 C22orf39 chr22 19344505 - IGHG4 chr14 106136183 - Exonic hg19 THCA TCGA-ET-A3DT-01A 24 1 Out-of-frame Inter-chr q11.21 53915 ChimerSeq STARFusion TCGA_RNA-Seq HIRA-IGHG4 HIRA chr22 19344505 - IGHG4 chr14 106136183 - Exonic hg19 THCA TCGA-ET-A3DT-01A 24 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 53916 ChimerSeq STARFusion TCGA_RNA-Seq CLU-RNA45S5 CLU chr8 27462773 - RNA45S5 chrUn_gl000220 114271 + Exonic hg19 THCA TCGA-EL-A3GZ-01A 3 30 Out-of-frame Inter-chr p21.1 Tumor suppressor gene 53917 ChimerSeq STARFusion TCGA_RNA-Seq CLU-SSFA2 CLU chr8 27457297 - SSFA2 chr2 182794288 + Exonic hg19 THCA TCGA-EL-A3GZ-01A 2 1 In-Frame Inter-chr p21.1 Tumor suppressor gene q31.3 53918 ChimerSeq STARFusion TCGA_RNA-Seq NAIP-OCLN NAIP chr5 70269956 - OCLN chr5 68830521 + Exonic hg19 THCA TCGA-EL-A3CP-01A 2 6 Out-of-frame Intra-chr q13.2 q13.2 53919 ChimerSeq STARFusion TCGA_RNA-Seq RET-LINC00578 RET chr10 43610184 + LINC00578 chr3 177347205 + Exonic hg19 THCA TCGA-ET-A40R-01A 20 214 CDS-5'UTR Inter-chr q11.21 TK:Ret Oncogene q26.32 53920 ChimerSeq STARFusion TCGA_RNA-Seq RET-LINC00578 RET chr10 43609123 + LINC00578 chr3 177347205 + Exonic hg19 THCA TCGA-ET-A40R-01A 11 214 CDS-5'UTR Inter-chr q11.21 TK:Ret Oncogene q26.32 53921 ChimerSeq STARFusion TCGA_RNA-Seq RET-LINC00578 RET chr10 43610184 + LINC00578 chr3 177469699 + Exonic hg19 THCA TCGA-ET-A40R-01A 5 214 CDS-5'UTR Inter-chr q11.21 TK:Ret Oncogene q26.32 53922 ChimerSeq STARFusion TCGA_RNA-Seq RET-LINC00578 RET chr10 43609123 + LINC00578 chr3 177469699 + Exonic hg19 THCA TCGA-ET-A40R-01A 4 214 CDS-5'UTR Inter-chr q11.21 TK:Ret Oncogene q26.32 53923 ChimerSeq STARFusion TCGA_RNA-Seq TBL1XR1-RET TBL1XR1 chr3 176765088 - RET chr10 43612032 + Exonic hg19 THCA TCGA-ET-A40R-01A 22 87 In-Frame Inter-chr q26.32 q11.21 TK:Ret Oncogene Seq+ 53924 ChimerSeq STARFusion TCGA_RNA-Seq GGNBP2-ZDHHC16 GGNBP2 chr17 34937968 + ZDHHC16 chr10 99216534 + Exonic hg19 THCA TCGA-ET-A40R-01A 2 4 Out-of-frame Inter-chr Tumor suppressor gene q24.1 Seq+ 53925 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG3 STK25 chr2 242434915 - IGHG3 chr14 106237745 - Exonic hg19 THCA TCGA-IM-A3EB-01A 22 1 Out-of-frame Inter-chr q37.3 53926 ChimerSeq STARFusion TCGA_RNA-Seq GPR141-NME8 GPR141 chr7 37725186 + NME8 chr7 37896876 + Exonic hg19 THCA TCGA-EL-A3ZR-01A 2 27 Out-of-frame Intra-chr p14.1 p14.1 53927 ChimerSeq STARFusion TCGA_RNA-Seq TG-SLA TG chr8 133913798 + SLA chr8 134050982 - Exonic hg19 THCA TCGA-BJ-A192-01A 20 96 Out-of-frame Intra-chr q24.22 q24.22 Seq+ 53928 ChimerSeq STARFusion TCGA_RNA-Seq FN1-SAR1A FN1 chr2 216239937 - SAR1A chr10 71920825 - Exonic hg19 THCA TCGA-BJ-A28X-01A 2 1 In-Frame Inter-chr q35 Oncogene q22.1 53929 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1217-FN1 KIAA1217 chr10 24813479 + FN1 chr2 216240443 - Exonic hg19 THCA TCGA-FE-A231-01A 4 10 Out-of-frame Inter-chr p12.2 q35 Oncogene 53930 ChimerSeq STARFusion TCGA_RNA-Seq NAIP-OCLN NAIP chr5 70269956 - OCLN chr5 68830521 + Exonic hg19 THCA TCGA-E8-A437-01A 2 20 Out-of-frame Intra-chr q13.2 q13.2 53931 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB6-UBE3C DNAJB6 chr7 157160177 + UBE3C chr7 157060279 + Exonic hg19 THCA TCGA-DE-A69J-01A 29 59 Out-of-frame Intra-chr q36.3 q36.3 53932 ChimerSeq STARFusion TCGA_RNA-Seq TTLL1-PACSIN2 TTLL1 chr22 43442416 - PACSIN2 chr22 43308163 - Exonic hg19 THCA TCGA-DE-A69J-01A 2 1 CDS-5'UTR Intra-chr q13.2 q13.2 53933 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61554231 - RET chr10 43612032 + Exonic hg19 THCA TCGA-CE-A13K-01A 18 93 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 53934 ChimerSeq STARFusion TCGA_RNA-Seq SCAF8-VWA8 SCAF8 chr6 155095206 + VWA8 chr13 42361679 - Exonic hg19 THCA TCGA-CE-A13K-01A 4 23 Out-of-frame Inter-chr q25.2 q14.11 Seq+ 53935 ChimerSeq STARFusion TCGA_RNA-Seq RET-LINC00948 RET chr10 43609123 + LINC00948 chr10 61498320 - Exonic hg19 THCA TCGA-CE-A13K-01A 5 12 Out-of-frame Intra-chr q11.21 TK:Ret Oncogene 53936 ChimerSeq STARFusion TCGA_RNA-Seq TAF3-ZDHHC14 TAF3 chr10 7866523 + ZDHHC14 chr6 157963617 + Exonic hg19 THCA TCGA-CE-A13K-01A 3 15 Out-of-frame Inter-chr p14 q25.3 Seq+ 53937 ChimerSeq STARFusion TCGA_RNA-Seq UST-CCDC6 UST chr6 149342617 + CCDC6 chr10 61552867 - Exonic hg19 THCA TCGA-CE-A13K-01A 3 10 Out-of-frame Inter-chr q25.1 q21.2 Seq+ 53938 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86295183 + Exonic hg19 THCA TCGA-CE-A13K-01A 2 8 CDS-5'UTR Intra-chr q21.2 q21.2 53939 ChimerSeq STARFusion TCGA_RNA-Seq TMEM242-PREP TMEM242 chr6 157739814 - PREP chr6 105845802 - Exonic hg19 THCA TCGA-CE-A13K-01A 2 8 In-Frame Intra-chr q25.3 q21 Seq+ 53940 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB14-IGL@ DNAJB14 chr4 100820114 - IGL@ chr22 23247168 + Exonic hg19 THCA TCGA-DE-A0XZ-01A 9 0 Out-of-frame Inter-chr q23 q11.22 53941 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB14-IGLC2 DNAJB14 chr4 100820111 - IGLC2 chr22 23241801 + Exonic hg19 THCA TCGA-DE-A0XZ-01A 9 0 Out-of-frame Inter-chr q23 q11.22 53942 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB14-IGLJ2 DNAJB14 chr4 100820111 - IGLJ2 chr22 23241801 + Exonic hg19 THCA TCGA-DE-A0XZ-01A 9 0 Out-of-frame Inter-chr q23 q11.22 53943 ChimerSeq STARFusion TCGA_RNA-Seq ZMYND19-ARRDC1 ZMYND19 chr9 140481419 - ARRDC1 chr9 140507348 + Exonic hg19 THCA TCGA-EM-A2P3-01A 10 33 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 53944 ChimerSeq STARFusion TCGA_RNA-Seq EHMT1-ZMYND19 EHMT1 chr9 140513501 + ZMYND19 chr9 140483170 - Exonic hg19 THCA TCGA-EM-A2P3-01A 9 2 In-Frame Intra-chr q34.3 q34.3 Seq+ 53945 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-BJ-A0ZJ-01A 25 96 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 53946 ChimerSeq STARFusion TCGA_RNA-Seq OR2T27-IGKC OR2T27 chr1 248813562 - IGKC chr2 89161433 - Exonic hg19 THCA TCGA-BJ-A0ZJ-01A 17 0 Out-of-frame Inter-chr q44 p11.2 53947 ChimerSeq STARFusion TCGA_RNA-Seq OR2T27-IGKJ1 OR2T27 chr1 248813562 - IGKJ1 chr2 89161433 - Exonic hg19 THCA TCGA-BJ-A0ZJ-01A 17 0 Out-of-frame Inter-chr q44 p11.2 53948 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43610035 + Exonic hg19 THCA TCGA-EL-A3ZP-01A 10 68 Out-of-frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 53949 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-EL-A3ZP-01A 5 68 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 53950 ChimerSeq STARFusion TCGA_RNA-Seq BRAF-AP3B1 BRAF chr7 140494108 - AP3B1 chr5 77335098 - Exonic hg19 THCA TCGA-EL-A3T0-01A 32 84 In-Frame Inter-chr q34 TKL:RAF Oncogene q14.1 Seq+ 53951 ChimerSeq STARFusion TCGA_RNA-Seq HMGB1-CRYL1 HMGB1 chr13 31191353 - CRYL1 chr13 21086689 - Exonic hg19 THCA TCGA-EL-A3T0-01A 3 6 5'UTR-CDS Intra-chr q12.3 q12.11 Seq+ 53952 ChimerSeq STARFusion TCGA_RNA-Seq AP3B1-BRAF AP3B1 chr5 77385217 - BRAF chr7 140487384 - Exonic hg19 THCA TCGA-EL-A3T0-01A 2 7 In-Frame Inter-chr q14.1 q34 TKL:RAF Oncogene Seq+ 53953 ChimerSeq STARFusion TCGA_RNA-Seq EML4-ALK EML4 chr2 42492091 + ALK chr2 29449940 - Exonic hg19 THCA TCGA-E8-A432-01A 10 91 Out-of-frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 53954 ChimerSeq STARFusion TCGA_RNA-Seq EML4-ALK EML4 chr2 42491871 + ALK chr2 29449940 - Exonic hg19 THCA TCGA-E8-A432-01A 4 90 In-Frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 53955 ChimerSeq STARFusion TCGA_RNA-Seq EML4-ALK EML4 chr2 42491871 + ALK chr2 29450538 - Exonic hg19 THCA TCGA-E8-A432-01A 3 90 In-Frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 53956 ChimerSeq STARFusion TCGA_RNA-Seq EML4-ALK EML4 chr2 42492091 + ALK chr2 29450538 - Exonic hg19 THCA TCGA-E8-A432-01A 2 90 Out-of-frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 53957 ChimerSeq STARFusion TCGA_RNA-Seq IFT74-CACNA2D3 IFT74 chr9 26990193 + CACNA2D3 chr3 55038790 + Exonic hg19 THCA TCGA-E8-A432-01A 3 14 In-Frame Inter-chr p21.2 p21.1 Tumor suppressor gene Seq+ 53958 ChimerSeq STARFusion TCGA_RNA-Seq DAK-IGH@ DAK chr11 61114564 + IGH@ chr14 106330468 - Exonic hg19 THCA TCGA-FE-A230-01A 9 1 Out-of-frame Inter-chr 32.33 53959 ChimerSeq STARFusion TCGA_RNA-Seq DAK-IGHG3 DAK chr11 61114564 + IGHG3 chr14 106330468 - Exonic hg19 THCA TCGA-FE-A230-01A 9 1 Out-of-frame Inter-chr 53960 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-TOMM40 IGH@ chr14 106452809 - TOMM40 chr19 45404295 + Exonic hg19 THCA TCGA-FE-A230-01A 9 1 Out-of-frame Inter-chr 32.33 q13.32 53961 ChimerSeq STARFusion TCGA_RNA-Seq DAK-IGH@ DAK chr11 61114568 + IGH@ chr14 106330063 - Exonic hg19 THCA TCGA-FE-A230-01A 7 3 Out-of-frame Inter-chr 32.33 53962 ChimerSeq STARFusion TCGA_RNA-Seq RRBP1-RNA45S5 RRBP1 chr20 17600287 - RNA45S5 chrUn_gl000220 114686 + Exonic hg19 THCA TCGA-EM-A4FO-01A 3 1 Out-of-frame Inter-chr p12.1 53963 ChimerSeq STARFusion TCGA_RNA-Seq BCL2L11-BRAF BCL2L11 chr2 111881716 + BRAF chr7 140482957 - Exonic hg19 THCA TCGA-ET-A2MX-01A 6 17 In-Frame Inter-chr q13 Tumor suppressor gene q34 TKL:RAF Oncogene Seq+ 53964 ChimerSeq STARFusion TCGA_RNA-Seq BCL2L11-BRAF BCL2L11 chr2 111881446 + BRAF chr7 140482957 - Exonic hg19 THCA TCGA-ET-A2MX-01A 2 17 In-Frame Inter-chr q13 Tumor suppressor gene q34 TKL:RAF Oncogene Seq+ 53965 ChimerSeq STARFusion TCGA_RNA-Seq BRAF-AGK BRAF chr7 140500162 - AGK chr7 141292946 + Exonic hg19 THCA TCGA-DJ-A2PX-01A 17 52 In-Frame Intra-chr q34 TKL:RAF Oncogene Seq+ 53966 ChimerSeq STARFusion TCGA_RNA-Seq MCF2L-RGCC MCF2L chr13 113699675 + RGCC chr13 42040959 + Exonic hg19 THCA TCGA-KS-A41J-01A 2 1 Out-of-frame Intra-chr q34 q14.11 53967 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP19-RRP12 ARHGAP19 chr10 98994974 - RRP12 chr10 99153517 - Exonic hg19 THCA TCGA-DJ-A3VM-01A 3 14 In-Frame Intra-chr q24.1 q24.1 Seq+ 53968 ChimerSeq STARFusion TCGA_RNA-Seq BEST1-TG BEST1 chr11 61732987 + TG chr8 134034274 + Exonic hg19 THCA TCGA-DJ-A3VM-01A 3 11 Out-of-frame Inter-chr q12.3 q24.22 53969 ChimerSeq STARFusion TCGA_RNA-Seq BRAF-C7orf10 BRAF chr7 140624366 - C7orf10 chr7 40789033 + Exonic hg19 THCA TCGA-FY-A40N-01A 16 303 In-Frame Intra-chr q34 TKL:RAF Oncogene Seq+ 53970 ChimerSeq STARFusion TCGA_RNA-Seq SND1-BRAF SND1 chr7 127361454 + BRAF chr7 140487384 - Exonic hg19 THCA TCGA-FY-A40N-01A 8 22 In-Frame Intra-chr q32.1 q34 TKL:RAF Oncogene KB Pub Seq+ 53971 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86351941 + Exonic hg19 THCA TCGA-ET-A3BX-01A 3 18 Out-of-frame Intra-chr q21.2 q21.2 53972 ChimerSeq STARFusion TCGA_RNA-Seq CLU-TESC CLU chr8 27455977 - TESC chr12 117536326 - Exonic hg19 THCA TCGA-DJ-A2PR-01A 8 1 3'UTR-3'UTR Inter-chr p21.1 Tumor suppressor gene q24.22 53973 ChimerSeq STARFusion TCGA_RNA-Seq SERPINA1-IGH@ SERPINA1 chr14 94844888 - IGH@ chr14 106208441 - Exonic hg19 THCA TCGA-DJ-A2PR-01A 3 7 Out-of-frame Intra-chr q32.13 32.33 53974 ChimerSeq STARFusion TCGA_RNA-Seq SERPINA1-IGHG1 SERPINA1 chr14 94844888 - IGHG1 chr14 106208441 - Exonic hg19 THCA TCGA-DJ-A2PR-01A 3 5 Out-of-frame Intra-chr q32.13 q32.33 53975 ChimerSeq STARFusion TCGA_RNA-Seq TNKS1BP1-IGH@ TNKS1BP1 chr11 57067185 - IGH@ chr14 106209411 - Exonic hg19 THCA TCGA-BJ-A0Z3-01A 12 1 Out-of-frame Inter-chr q12.1 32.33 53976 ChimerSeq STARFusion TCGA_RNA-Seq SEC16A-NOTCH1 SEC16A chr9 139357339 - NOTCH1 chr9 139438554 - Exonic hg19 THCA TCGA-DJ-A2Q3-01A 5 10 Out-of-frame Intra-chr q34.3 q34.3 Oncogene Tumor suppressor gene KB Pub Seq+ 53977 ChimerSeq STARFusion TCGA_RNA-Seq PARG-BMS1 PARG chr10 51093249 - BMS1 chr10 43287075 + Exonic hg19 THCA TCGA-DJ-A2Q3-01A 2 17 In-Frame Intra-chr q11.23 q11.21 53978 ChimerSeq STARFusion TCGA_RNA-Seq LOC400794-RXRG LOC400794 chr1 165543255 - RXRG chr1 165398203 - Exonic hg19 THCA TCGA-DJ-A2Q7-01A 6 19 3'UTR-CDS Intra-chr q23.3 Transcription factor 53979 ChimerSeq STARFusion TCGA_RNA-Seq CGNL1-CLU CGNL1 chr15 57839712 + CLU chr8 27462523 - Exonic hg19 THCA TCGA-DJ-A2Q7-01A 3 1 Out-of-frame Inter-chr q21.3 p21.1 Tumor suppressor gene 53980 ChimerSeq STARFusion TCGA_RNA-Seq MACF1-BRAF MACF1 chr1 39896580 + BRAF chr7 140487384 - Exonic hg19 THCA TCGA-DE-A0Y2-01A 80 231 In-Frame Inter-chr p34.3 q34 TKL:RAF Oncogene Seq+ 53981 ChimerSeq STARFusion TCGA_RNA-Seq BRAF-MACF1 BRAF chr7 140494108 - MACF1 chr1 39898207 + Exonic hg19 THCA TCGA-DE-A0Y2-01A 10 45 In-Frame Inter-chr q34 TKL:RAF Oncogene p34.3 Seq+ 53982 ChimerSeq STARFusion TCGA_RNA-Seq ATP2A2-COPG1 ATP2A2 chr12 110784681 + COPG1 chr3 128976421 + Exonic hg19 THCA TCGA-EM-A22L-01A 17 1 Out-of-frame Inter-chr q24.11 q21.3 Seq+ 53983 ChimerSeq STARFusion TCGA_RNA-Seq LRP8-PAX8 LRP8 chr1 53723991 - PAX8 chr2 114004496 - Exonic hg19 THCA TCGA-BJ-A291-01A 129 407 In-Frame Inter-chr p32.3 q14.1 Oncogene Transcription factor Seq+ 53984 ChimerSeq STARFusion TCGA_RNA-Seq LRP8-PAX8 LRP8 chr1 53722912 - PAX8 chr2 114004496 - Exonic hg19 THCA TCGA-BJ-A291-01A 82 400 In-Frame Inter-chr p32.3 q14.1 Oncogene Transcription factor Seq+ 53985 ChimerSeq STARFusion TCGA_RNA-Seq PAX8-GLIS1 PAX8 chr2 114035947 - GLIS1 chr1 54065951 - Exonic hg19 THCA TCGA-BJ-A291-01A 42 150 CDS-5'UTR Inter-chr q14.1 Oncogene Transcription factor p32.3 Transcription factor Seq+ 53986 ChimerSeq STARFusion TCGA_RNA-Seq DSP-IGKC DSP chr6 7559516 + IGKC chr2 89161431 - Exonic hg19 THCA TCGA-DJ-A2Q9-01A 9 2 Out-of-frame Inter-chr p24.3 Tumor suppressor gene p11.2 53987 ChimerSeq STARFusion TCGA_RNA-Seq DSP-IGKC DSP chr6 7559516 + IGKC chr2 89160431 - Exonic hg19 THCA TCGA-DJ-A2Q9-01A 7 2 Out-of-frame Inter-chr p24.3 Tumor suppressor gene p11.2 53988 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-TINAGL1 IGHG1 chr14 106134591 - TINAGL1 chr1 32052503 + Exonic hg19 THCA TCGA-H2-A421-01A 27 1 Out-of-frame Inter-chr q32.33 p35.2 53989 ChimerSeq STARFusion TCGA_RNA-Seq FN1-IGL@ FN1 chr2 216274660 - IGL@ chr22 23241803 + Exonic hg19 THCA TCGA-H2-A421-01A 20 7 Out-of-frame Inter-chr q35 Oncogene q11.22 53990 ChimerSeq STARFusion TCGA_RNA-Seq FN1-IGLC2 FN1 chr2 216274660 - IGLC2 chr22 23241803 + Exonic hg19 THCA TCGA-H2-A421-01A 20 1 Out-of-frame Inter-chr q35 Oncogene q11.22 53991 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-ET-A3DR-01A 29 102 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 53992 ChimerSeq STARFusion TCGA_RNA-Seq UPF3A-CDC16 UPF3A chr13 115052104 + CDC16 chr13 115028354 + Exonic hg19 THCA TCGA-DJ-A2QA-01A 7 44 Out-of-frame Intra-chr q34 q34 Seq+ 53993 ChimerSeq STARFusion TCGA_RNA-Seq ACAT2-IGHG1 ACAT2 chr6 160183157 + IGHG1 chr14 106209409 - Exonic hg19 THCA TCGA-EL-A3N3-01A 8 1 Out-of-frame Inter-chr q25.3 q32.33 53994 ChimerSeq STARFusion TCGA_RNA-Seq INTS1-IGHG1 INTS1 chr7 1511980 - IGHG1 chr14 106209409 - Exonic hg19 THCA TCGA-EL-A3N3-01A 7 1 Out-of-frame Inter-chr p22.3 q32.33 53995 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPF-IGH@ HNRNPF chr10 43892150 - IGH@ chr14 106330068 - Exonic hg19 THCA TCGA-E8-A242-01A 60 1 Out-of-frame Inter-chr q11.21 32.33 53996 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86295183 + Exonic hg19 THCA TCGA-E8-A242-01A 2 11 CDS-5'UTR Intra-chr q21.2 q21.2 53997 ChimerSeq STARFusion TCGA_RNA-Seq HMGA2-MSRB3 HMGA2 chr12 66232349 + MSRB3 chr12 65856935 + Exonic hg19 THCA TCGA-DE-A4MD-01A 346 1379 In-Frame Intra-chr q14.3 Transcription factor q14.3 Seq+ 53998 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86193868 + CA3 chr8 86351941 + Exonic hg19 THCA TCGA-DJ-A3VA-01A 3 19 3'UTR-CDS Intra-chr q21.2 q21.2 53999 ChimerSeq STARFusion TCGA_RNA-Seq RNA45S5-COX4I1 RNA45S5 chrUn_gl000220 110500 + COX4I1 chr16 85840458 + Exonic hg19 THCA TCGA-EM-A22Q-01A 3 2 Out-of-frame Inter-chr q24.1 54000 ChimerSeq STARFusion TCGA_RNA-Seq ZNF277-TPD52L1 ZNF277 chr7 111846862 + TPD52L1 chr6 125541224 + Exonic hg19 THCA TCGA-EM-A22Q-01A 2 1 In-Frame Inter-chr q31.1 Transcription factor q22.31 Seq+ 54001 ChimerSeq STARFusion TCGA_RNA-Seq BCORL1-RAB33A BCORL1 chrX 129173257 + RAB33A chrX 129318259 + Exonic hg19 THCA TCGA-BJ-A0Z2-01A 2 17 Out-of-frame Intra-chr q26.1 Tumor suppressor gene q26.1 Seq+ 54002 ChimerSeq STARFusion TCGA_RNA-Seq LLGL1-ALKBH5 LLGL1 chr17 18136116 + ALKBH5 chr17 18110129 + Exonic hg19 THCA TCGA-FY-A40L-01A 8 36 In-Frame Intra-chr Tumor suppressor gene p11.2 Seq+ 54003 ChimerSeq STARFusion TCGA_RNA-Seq IQGAP1-ZNF774 IQGAP1 chr15 90934105 + ZNF774 chr15 90897874 + Exonic hg19 THCA TCGA-FY-A40L-01A 6 37 CDS-5'UTR Intra-chr q26.1 q26.1 Transcription factor Seq+ 54004 ChimerSeq STARFusion TCGA_RNA-Seq COASY-IGHG2 COASY chr17 40714608 + IGHG2 chr14 106111129 - Exonic hg19 THCA TCGA-BJ-A28Z-01A 141 0 Out-of-frame Inter-chr q21.2 54005 ChimerSeq STARFusion TCGA_RNA-Seq COASY-IGHG2 COASY chr17 40714608 + IGHG2 chr14 106136184 - Exonic hg19 THCA TCGA-BJ-A28Z-01A 135 0 Out-of-frame Inter-chr q21.2 54006 ChimerSeq STARFusion TCGA_RNA-Seq COASY-IGHG2 COASY chr17 40714608 + IGHG2 chr14 106209410 - Exonic hg19 THCA TCGA-BJ-A28Z-01A 134 0 Out-of-frame Inter-chr q21.2 54007 ChimerSeq STARFusion TCGA_RNA-Seq ACAT2-IGHG1 ACAT2 chr6 160183157 + IGHG1 chr14 106209409 - Exonic hg19 THCA TCGA-BJ-A28Z-01A 97 1 Out-of-frame Inter-chr q25.3 q32.33 54008 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-BJ-A28Z-01A 10 83 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 54009 ChimerSeq STARFusion TCGA_RNA-Seq ACAT2-IGHG1 ACAT2 chr6 160183157 + IGHG1 chr14 106237744 - Exonic hg19 THCA TCGA-BJ-A28Z-01A 29 1 Out-of-frame Inter-chr q25.3 q32.33 54010 ChimerSeq STARFusion TCGA_RNA-Seq DNAJB2-IGKC DNAJB2 chr2 220151425 + IGKC chr2 89156807 - Exonic hg19 THCA TCGA-BJ-A28Z-01A 11 1 Out-of-frame Intra-chr q35 p11.2 54011 ChimerSeq STARFusion TCGA_RNA-Seq CSGALNACT2-SLC16A9 CSGALNACT2 chr10 43651258 + SLC16A9 chr10 61412708 - Exonic hg19 THCA TCGA-BJ-A28Z-01A 3 19 In-Frame Intra-chr q11.21 q21.2 Seq+ 54012 ChimerSeq STARFusion TCGA_RNA-Seq SERPINA1-IGHG1 SERPINA1 chr14 94844885 - IGHG1 chr14 106208439 - Exonic hg19 THCA TCGA-BJ-A28Z-01A 3 16 Out-of-frame Intra-chr q32.13 q32.33 54013 ChimerSeq STARFusion TCGA_RNA-Seq CSGALNACT2-SLC16A9 CSGALNACT2 chr10 43651258 + SLC16A9 chr10 61414347 - Exonic hg19 THCA TCGA-BJ-A28Z-01A 2 19 In-Frame Intra-chr q11.21 q21.2 Seq+ 54014 ChimerSeq STARFusion TCGA_RNA-Seq SQSTM1-NTRK1 SQSTM1 chr5 179252226 + NTRK1 chr1 156844363 + Exonic hg19 THCA TCGA-ET-A40S-01A 264 1220 In-Frame Inter-chr q35.3 q23.1 Oncogene KB Pub Seq+ 54015 ChimerSeq STARFusion TCGA_RNA-Seq PRCC-TMED5 PRCC chr1 156738031 + TMED5 chr1 93625783 - Exonic hg19 THCA TCGA-ET-A40S-01A 6 28 In-Frame Intra-chr q23.1 p22.1 Seq+ 54016 ChimerSeq STARFusion TCGA_RNA-Seq TG-FCGBP TG chr8 134145840 + FCGBP chr19 40399465 - Exonic hg19 THCA TCGA-EM-A2CJ-01A 3 79 Out-of-frame Inter-chr q24.22 54017 ChimerSeq STARFusion TCGA_RNA-Seq IGFBP7-TG IGFBP7 chr4 57899412 - TG chr8 134107354 + Exonic hg19 THCA TCGA-EM-A2CJ-01A 3 22 Out-of-frame Inter-chr q12 Tumor suppressor gene q24.22 54018 ChimerSeq STARFusion TCGA_RNA-Seq TG-B2M TG chr8 133883796 + B2M chr15 45009805 + Exonic hg19 THCA TCGA-EM-A2CJ-01A 2 24 CDS-3'UTR Inter-chr q24.22 Oncogene 54019 ChimerSeq STARFusion TCGA_RNA-Seq PAX8-PPARG PAX8 chr2 113994178 - PPARG chr3 12421203 + Exonic hg19 THCA TCGA-BJ-A0YZ-01A 49 485 In-Frame Inter-chr q14.1 Oncogene Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 54020 ChimerSeq STARFusion TCGA_RNA-Seq PPARG-PAX8 PPARG chr3 12353952 + PAX8 chr2 113984833 - Exonic hg19 THCA TCGA-BJ-A0YZ-01A 15 40 5'UTR-CDS Inter-chr p25.2 Oncogene Tumor suppressor gene Transcription factor q14.1 Oncogene Transcription factor KB Seq+ 54021 ChimerSeq STARFusion TCGA_RNA-Seq VPS53-F7 VPS53 chr17 600658 - F7 chr13 113768066 + Exonic hg19 THCA TCGA-EL-A3CR-01A 3 2 In-Frame Inter-chr Tumor suppressor gene q34 Seq+ 54022 ChimerSeq STARFusion TCGA_RNA-Seq BEST1-TPT1 BEST1 chr11 61732548 + TPT1 chr13 45915317 - Exonic hg19 THCA TCGA-ET-A39T-01A 3 11 Out-of-frame Inter-chr q12.3 q14.13 54023 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-DO-A1JZ-01A 47 122 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 54024 ChimerSeq STARFusion TCGA_RNA-Seq PCSK5-FN1 PCSK5 chr9 78936364 + FN1 chr2 216285526 - Exonic hg19 THCA TCGA-DO-A1JZ-01A 8 1 Out-of-frame Inter-chr q21.13 q35 Oncogene 54025 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-EL-A3ZS-01A 10 108 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 54026 ChimerSeq STARFusion TCGA_RNA-Seq CLU-TESC CLU chr8 27455977 - TESC chr12 117536326 - Exonic hg19 THCA TCGA-L6-A4ET-01A 8 2 3'UTR-3'UTR Inter-chr p21.1 Tumor suppressor gene q24.22 54027 ChimerSeq STARFusion TCGA_RNA-Seq LOC400794-RXRG LOC400794 chr1 165543255 - RXRG chr1 165398203 - Exonic hg19 THCA TCGA-ET-A2MZ-01A 6 13 3'UTR-CDS Intra-chr q23.3 Transcription factor 54028 ChimerSeq STARFusion TCGA_RNA-Seq LOC400794-RXRG LOC400794 chr1 165543255 - RXRG chr1 165389251 - Exonic hg19 THCA TCGA-ET-A2MZ-01A 2 13 3'UTR-CDS Intra-chr q23.3 Transcription factor 54029 ChimerSeq STARFusion TCGA_RNA-Seq HMGA2-MSRB3 HMGA2 chr12 66232349 + MSRB3 chr12 65856935 + Exonic hg19 THCA TCGA-DE-A4MD-06A 237 945 In-Frame Intra-chr q14.3 Transcription factor q14.3 Seq+ 54030 ChimerSeq STARFusion TCGA_RNA-Seq TRIM27-RET TRIM27 chr6 28887789 - RET chr10 43612032 + Exonic hg19 THCA TCGA-CE-A481-01A 16 83 In-Frame Inter-chr q11.21 TK:Ret Oncogene KB Pub Seq+ 54031 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106111129 - Exonic hg19 THCA TCGA-CE-A481-01A 21 1 Out-of-frame Inter-chr q37.3 54032 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-C3 IGH@ chr14 106725200 - C3 chr19 6686168 - Exonic hg19 THCA TCGA-CE-A481-01A 10 1 Out-of-frame Inter-chr 32.33 p13.3 54033 ChimerSeq STARFusion TCGA_RNA-Seq STK25-IGHG2 STK25 chr2 242434915 - IGHG2 chr14 106136184 - Exonic hg19 THCA TCGA-CE-A481-01A 9 1 Out-of-frame Inter-chr q37.3 54034 ChimerSeq STARFusion TCGA_RNA-Seq TIMM23B-LINC00843 TIMM23B chr10 51387763 + LINC00843 chr10 51732772 + Exonic hg19 THCA TCGA-J8-A3YD-01A 3 32 Out-of-frame Intra-chr q11.23 q11.23 54035 ChimerSeq STARFusion TCGA_RNA-Seq LOC400794-RXRG LOC400794 chr1 165543255 - RXRG chr1 165398203 - Exonic hg19 THCA TCGA-ET-A40Q-01A 8 7 3'UTR-CDS Intra-chr q23.3 Transcription factor 54036 ChimerSeq STARFusion TCGA_RNA-Seq GAS8-WDR59 GAS8 chr16 90086176 + WDR59 chr16 74976724 - Exonic hg19 THCA TCGA-BJ-A0ZB-01A 6 18 5'UTR-CDS Intra-chr q24.3 q23.1 Seq+ 54037 ChimerSeq STARFusion TCGA_RNA-Seq GAS8-WDR59 GAS8 chr16 90089132 + WDR59 chr16 74976724 - Exonic hg19 THCA TCGA-BJ-A0ZB-01A 5 18 Out-of-frame Intra-chr q24.3 q23.1 Seq+ 54038 ChimerSeq STARFusion TCGA_RNA-Seq GPR141-NME8 GPR141 chr7 37723506 + NME8 chr7 37896876 + Exonic hg19 THCA TCGA-FY-A76V-01A 2 7 Out-of-frame Intra-chr p14.1 p14.1 54039 ChimerSeq STARFusion TCGA_RNA-Seq CA13-CA3 CA13 chr8 86180856 + CA3 chr8 86351941 + Exonic hg19 THCA TCGA-EM-A1CU-01A 3 17 Out-of-frame Intra-chr q21.2 q21.2 54040 ChimerSeq STARFusion TCGA_RNA-Seq LOC400794-RXRG LOC400794 chr1 165543255 - RXRG chr1 165398203 - Exonic hg19 THCA TCGA-DJ-A3UN-01A 9 32 3'UTR-CDS Intra-chr q23.3 Transcription factor 54041 ChimerSeq STARFusion TCGA_RNA-Seq LOC100288778-WASH3P LOC100288778 chr12 89018 + WASH3P chr15 102515210 + Exonic hg19 THCA TCGA-DJ-A3UN-01A 4 8 5'UTR-5'UTR Inter-chr q26.3 54042 ChimerSeq STARFusion TCGA_RNA-Seq LGALS3BP-TG LGALS3BP chr17 76968290 - TG chr8 133981700 + Exonic hg19 THCA TCGA-EM-A2CR-01A 3 14 Out-of-frame Inter-chr q25.3 q24.22 54043 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-E3-A3E0-01A 47 140 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 54044 ChimerSeq STARFusion TCGA_RNA-Seq PRSS3-KLK6 PRSS3 chr9 33798620 + KLK6 chr19 51462572 - Exonic hg19 THCA TCGA-DJ-A4UL-01A 5 2 In-Frame Inter-chr p13.3 q13.41 Tumor suppressor gene 54045 ChimerSeq STARFusion TCGA_RNA-Seq PTGDS-MFSD10 PTGDS chr9 139872144 + MFSD10 chr4 2935671 - Exonic hg19 THYM TCGA-3G-ABI9 3 6 CDS-5'UTR Inter-chr q34.3 p16.3 Seq+ 54046 ChimerSeq STARFusion TCGA_RNA-Seq IL4I1-NAPA IL4I1 chr19 50430951 - NAPA chr19 47998853 - Exonic hg19 THYM TCGA-3G-ABI9 2 6 5'UTR-CDS Intra-chr q13.33 q13.33 54047 ChimerSeq STARFusion TCGA_RNA-Seq NUP62-NAPA NUP62 chr19 50430951 - NAPA chr19 47998853 - Exonic hg19 THYM TCGA-3G-ABI9 2 6 5'UTR-CDS Intra-chr q13.33 q13.33 54048 ChimerSeq STARFusion TCGA_RNA-Seq STMND1-SNAP29 STMND1 chr6 17110999 + SNAP29 chr22 21245338 + Exonic hg19 THYM TCGA-YT-A95E 3 1 Out-of-frame Inter-chr p22.3 q11.21 54049 ChimerSeq STARFusion TCGA_RNA-Seq ZMYM4-SFPQ ZMYM4 chr1 35734686 + SFPQ chr1 35643637 - Exonic hg19 THYM TCGA-YT-A95E 2 1 CDS-3'UTR Intra-chr p34.3 p34.3 54050 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB40-TMEM57 ZBTB40 chr1 22817138 + TMEM57 chr1 25824755 + Exonic hg19 THYM TCGA-YT-A95D 4 18 In-Frame Intra-chr p36.12 Transcription factor p36.11 Seq+ 54051 ChimerSeq STARFusion TCGA_RNA-Seq FAM83F-BAIAP2L2 FAM83F chr22 40391535 + BAIAP2L2 chr22 38494489 - Exonic hg19 THYM TCGA-5K-AAAP 16 51 In-Frame Intra-chr q13.1 q13.1 Seq+ 54052 ChimerSeq STARFusion TCGA_RNA-Seq FAM19A5-TBC1D22A FAM19A5 chr22 49042558 + TBC1D22A chr22 47274549 + Exonic hg19 THYM TCGA-5K-AAAP 6 30 In-Frame Intra-chr q13.32 q13.31 Seq+ 54053 ChimerSeq STARFusion TCGA_RNA-Seq MTSS1L-IGH@ MTSS1L chr16 70698321 - IGH@ chr14 106330464 - Exonic hg19 THYM TCGA-5G-A9ZZ 5 1 Out-of-frame Inter-chr q22.1 32.33 54054 ChimerSeq STARFusion TCGA_RNA-Seq CECR2-IGKJ2 CECR2 chr22 17984004 + IGKJ2 chr2 89161071 - Exonic hg19 THYM TCGA-5G-A9ZZ 3 1 Out-of-frame Inter-chr q11.1 p11.2 54055 ChimerSeq STARFusion TCGA_RNA-Seq MTAP-DMRTA1 MTAP chr9 21838009 + DMRTA1 chr9 22451063 + Exonic hg19 THYM TCGA-5G-A9ZZ 2 3 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.3 Transcription factor 54056 ChimerSeq STARFusion TCGA_RNA-Seq MIR142-MCM7 MIR142 chr17 56409831 - MCM7 chr7 99691024 - Exonic hg19 THYM TCGA-X7-A8D7 3 3 5'UTR-CDS Inter-chr q22 Tumor suppressor gene q22.1 54057 ChimerSeq STARFusion TCGA_RNA-Seq MIR142-MCM7 MIR142 chr17 56409831 - MCM7 chr7 99691024 - Exonic hg19 THYM TCGA-X7-A8M4 4 3 5'UTR-CDS Inter-chr q22 Tumor suppressor gene q22.1 54058 ChimerSeq STARFusion TCGA_RNA-Seq INPP5A-CWF19L1 INPP5A chr10 134351675 + CWF19L1 chr10 102013296 - Exonic hg19 THYM TCGA-X7-A8M5 2 0 In-Frame Intra-chr q26.3 q24.31 54059 ChimerSeq STARFusion TCGA_RNA-Seq RYBP-FHIT RYBP chr3 72495647 - FHIT chr3 59738047 - Exonic hg19 THYM TCGA-4V-A9QJ 279 1318 Out-of-frame Intra-chr p14.2 Tumor suppressor gene Seq+ 54060 ChimerSeq STARFusion TCGA_RNA-Seq UBE4B-RBP7 UBE4B chr1 10093752 + RBP7 chr1 10075840 + Exonic hg19 THYM TCGA-4V-A9QJ 39 173 In-Frame Intra-chr p36.22 Tumor suppressor gene p36.22 Seq+ 54061 ChimerSeq STARFusion TCGA_RNA-Seq PNMAL1-PPP5D1 PNMAL1 chr19 46974250 - PPP5D1 chr19 46985472 - Exonic hg19 THYM TCGA-4V-A9QJ 12 166 Out-of-frame Intra-chr q13.32 Seq+ 54062 ChimerSeq STARFusion TCGA_RNA-Seq PNMAL1-PPP5D1 PNMAL1 chr19 46974594 - PPP5D1 chr19 46984697 - Exonic hg19 THYM TCGA-4V-A9QJ 5 166 Out-of-frame Intra-chr q13.32 Seq+ 54063 ChimerSeq STARFusion TCGA_RNA-Seq EPSTI1-TSC22D1 EPSTI1 chr13 43566114 - TSC22D1 chr13 45010231 - Exonic hg19 THYM TCGA-4V-A9QJ 3 15 In-Frame Intra-chr q14.11 q14.11 Tumor suppressor gene Transcription factor Seq+ 54064 ChimerSeq STARFusion TCGA_RNA-Seq ELL-RABGGTA ELL chr19 18557558 - RABGGTA chr14 24740375 - Exonic hg19 THYM TCGA-4V-A9QJ 2 9 CDS-5'UTR Inter-chr p13.11 q12 Seq+ 54065 ChimerSeq STARFusion TCGA_RNA-Seq MIR142-MCM7 MIR142 chr17 56409831 - MCM7 chr7 99691024 - Exonic hg19 THYM TCGA-4V-A9QJ 3 2 5'UTR-CDS Inter-chr q22 Tumor suppressor gene q22.1 54066 ChimerSeq STARFusion TCGA_RNA-Seq PARP4-CERS1 PARP4 chr13 25008533 - CERS1 chr19 18980199 - Exonic hg19 THYM TCGA-4V-A9QJ 2 6 CDS-3'UTR Inter-chr q12.12 p13.11 Seq+ 54067 ChimerSeq STARFusion TCGA_RNA-Seq PARP4-GDF1 PARP4 chr13 25008533 - GDF1 chr19 18980199 - Exonic hg19 THYM TCGA-4V-A9QJ 2 6 Out-of-frame Inter-chr q12.12 p13.11 Seq+ 54068 ChimerSeq STARFusion TCGA_RNA-Seq ABCC1-C16orf45 ABCC1 chr16 16043656 + C16orf45 chr16 15661840 + Exonic hg19 THYM TCGA-4V-A9QJ 2 3 Out-of-frame Intra-chr Seq+ 54069 ChimerSeq STARFusion TCGA_RNA-Seq MIR142-MCM7 MIR142 chr17 56409831 - MCM7 chr7 99691024 - Exonic hg19 THYM TCGA-X7-A8DF 4 2 5'UTR-CDS Inter-chr q22 Tumor suppressor gene q22.1 54070 ChimerSeq STARFusion TCGA_RNA-Seq AKT1-B2M AKT1 chr14 105258935 - B2M chr15 45007621 + Exonic hg19 THYM TCGA-X7-A8DF 2 1 In-Frame Inter-chr q32.33 AGC:Akt Oncogene Oncogene 54071 ChimerSeq STARFusion TCGA_RNA-Seq ATXN10-COL16A1 ATXN10 chr22 46068059 + COL16A1 chr1 32158110 - Exonic hg19 THYM TCGA-X7-ABD9 3 26 Out-of-frame Inter-chr q13.31 p35.2 Seq+ 54072 ChimerSeq STARFusion TCGA_RNA-Seq NADK-HNRNPR NADK chr1 1709728 - HNRNPR chr1 23665101 - Exonic hg19 THYM TCGA-X7-ABD9 2 7 5'UTR-5'UTR Intra-chr p36.33 Seq+ 54073 ChimerSeq STARFusion TCGA_RNA-Seq FTL-AR FTL chr19 49470099 + AR chrX 66764975 + Exonic hg19 THYM TCGA-X7-ABD9 3 0 Out-of-frame Inter-chr q13.33 q12 Oncogene Tumor suppressor gene Transcription factor 54074 ChimerSeq STARFusion TCGA_RNA-Seq CCL25-AR CCL25 chr19 8127459 + AR chrX 66764976 + Exonic hg19 THYM TCGA-4V-A9QR 7 0 Out-of-frame Inter-chr p13.2 q12 Oncogene Tumor suppressor gene Transcription factor Seq+ 54075 ChimerSeq STARFusion TCGA_RNA-Seq MIR142-MCM7 MIR142 chr17 56409831 - MCM7 chr7 99691024 - Exonic hg19 THYM TCGA-4V-A9QW 3 2 5'UTR-CDS Inter-chr q22 Tumor suppressor gene q22.1 54076 ChimerSeq STARFusion TCGA_RNA-Seq GLTSCR2-DHX34 GLTSCR2 chr19 48249040 + DHX34 chr19 47885237 + Exonic hg19 THYM TCGA-4V-A9QT 2 1 Out-of-frame Intra-chr Tumor suppressor gene q13.32 54077 ChimerSeq STARFusion TCGA_RNA-Seq LIMK2-MED15 LIMK2 chr22 31621805 + MED15 chr22 20891404 + Exonic hg19 THYM TCGA-XM-A8R9 3 7 In-Frame Intra-chr q12.2 TKL:LISK q11.21 Seq+ 54078 ChimerSeq STARFusion TCGA_RNA-Seq GRAMD4-RTN4R GRAMD4 chr22 47033857 + RTN4R chr22 20230633 - Exonic hg19 THYM TCGA-XM-A8R9 2 1 In-Frame Intra-chr q13.31 q11.21 54079 ChimerSeq STARFusion TCGA_RNA-Seq IGLC3-AR IGLC3 chr22 23248961 + AR chrX 66764976 + Exonic hg19 THYM TCGA-XM-A8R8 3 0 Out-of-frame Inter-chr q11.22 q12 Oncogene Tumor suppressor gene Transcription factor 54080 ChimerSeq STARFusion TCGA_RNA-Seq MIR142-MCM7 MIR142 chr17 56409831 - MCM7 chr7 99691024 - Exonic hg19 THYM TCGA-XM-AAZ1 3 1 5'UTR-CDS Inter-chr q22 Tumor suppressor gene q22.1 54081 ChimerSeq STARFusion TCGA_RNA-Seq GAS6-LTBP3 GAS6 chr13 114541042 - LTBP3 chr11 65320453 - Exonic hg19 THYM TCGA-XU-A92O 2 1 In-Frame Inter-chr q34 Oncogene q13.1 54082 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-NANOS3 SBNO2 chr19 1147308 - NANOS3 chr19 13991256 + Exonic hg19 THYM TCGA-XU-A92V 10 53 Out-of-frame Intra-chr p13.3 p13.12 Seq+ 54083 ChimerSeq STARFusion TCGA_RNA-Seq DAZAP1-SBNO2 DAZAP1 chr19 1422395 + SBNO2 chr19 1127764 - Exonic hg19 THYM TCGA-XU-A92V 5 19 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 54084 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL5-NOC4L OSBPL5 chr11 3186446 - NOC4L chr12 132635526 + Exonic hg19 THYM TCGA-XU-A92W 2 0 5'UTR-CDS Inter-chr p15.4 q24.33 54085 ChimerSeq STARFusion TCGA_RNA-Seq NFIA-CDK2AP1 NFIA chr1 61872399 + CDK2AP1 chr12 123751829 - Exonic hg19 THYM TCGA-XU-A92Z 56 158 In-Frame Inter-chr p31.3 Transcription factor q24.31 Tumor suppressor gene Seq+ 54086 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A5-IGH@ SLC7A5 chr16 87868137 - IGH@ chr14 106209410 - Exonic hg19 THYM TCGA-XU-A92Z 4 1 Out-of-frame Inter-chr q24.2 32.33 54087 ChimerSeq STARFusion TCGA_RNA-Seq COL22A1-FAM135B COL22A1 chr8 139603667 - FAM135B chr8 139380245 - Exonic hg19 THYM TCGA-XU-A92Z 3 0 CDS-5'UTR Intra-chr q24.3 q24.23 54088 ChimerSeq STARFusion TCGA_RNA-Seq SYT1-C6orf211 SYT1 chr12 79747399 + C6orf211 chr6 151775683 + Exonic hg19 THYM TCGA-XU-A92Z 2 1 Out-of-frame Inter-chr q21.2 Seq+ 54089 ChimerSeq STARFusion TCGA_RNA-Seq POR-HMOX2 POR chr7 75600410 + HMOX2 chr16 4555485 + Exonic hg19 THYM TCGA-XU-AAXW 2 0 CDS-5'UTR Inter-chr q11.23 p13.3 54090 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80950355 - MRPS28 chr8 80831383 - Exonic hg19 THYM TCGA-4V-A9QN 5 31 Out-of-frame Intra-chr q21.13 q21.13 54091 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80954854 - MRPS28 chr8 80831382 - Exonic hg19 THYM TCGA-4V-A9QN 4 31 Out-of-frame Intra-chr q21.13 q21.13 54092 ChimerSeq STARFusion TCGA_RNA-Seq MED26-GADD45GIP1 MED26 chr19 16738683 - GADD45GIP1 chr19 13065340 - Exonic hg19 THYM TCGA-5U-AB0D 22 43 Out-of-frame Intra-chr p13.11 p13.13 Tumor suppressor gene Seq+ 54093 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-CHMP1A CPSF6 chr12 69656342 + CHMP1A chr16 89713739 - Exonic hg19 THYM TCGA-ZB-A96D 2 2 3'UTR-3'UTR Inter-chr q15 q24.3 Seq+ 54094 ChimerSeq STARFusion TCGA_RNA-Seq ACO2-ISX ACO2 chr22 41865186 + ISX chr22 35478511 + Exonic hg19 THYM TCGA-ZB-A96G 4 2 5'UTR-CDS Intra-chr q13.2 q12.3 Transcription factor Seq+ 54095 ChimerSeq STARFusion TCGA_RNA-Seq LINC00977-PVT1 LINC00977 chr8 130253423 - PVT1 chr8 129108764 + Exonic hg19 THYM TCGA-XM-A8RC 2 1 Out-of-frame Intra-chr q24.21 q24.21 54096 ChimerSeq STARFusion TCGA_RNA-Seq SCAF8-TIAM2 SCAF8 chr6 155055064 + TIAM2 chr6 155265250 + Exonic hg19 THYM TCGA-XM-A8RG 2 1 CDS-5'UTR Intra-chr q25.2 q25.2 54097 ChimerSeq STARFusion TCGA_RNA-Seq CTDSPL-TNRC6B CTDSPL chr3 37988702 + TNRC6B chr22 40717094 + Exonic hg19 THYM TCGA-XM-A8RF 3 5 In-Frame Inter-chr p22.2 Tumor suppressor gene q13.1 Seq+ 54098 ChimerSeq STARFusion TCGA_RNA-Seq CRELD1-JAGN1 CRELD1 chr3 9979847 + JAGN1 chr3 9934886 + Exonic hg19 THYM TCGA-XM-A8RE 13 22 Out-of-frame Intra-chr p25.3 p25.3 Seq+ 54099 ChimerSeq STARFusion TCGA_RNA-Seq RNY3P8-C2CD4D RNY3P8 chr13 95963089 - C2CD4D chr1 151811581 - Exonic hg19 THYM TCGA-XM-A8RE 3 0 Out-of-frame Inter-chr q32.1 q21.3 54100 ChimerSeq STARFusion TCGA_RNA-Seq HSF1-IGLJ3 HSF1 chr8 145537174 + IGLJ3 chr22 23247170 + Exonic hg19 THYM TCGA-XM-A8RD 9 0 Out-of-frame Inter-chr q24.3 Transcription factor q11.22 54101 ChimerSeq STARFusion TCGA_RNA-Seq TRDV3-TRAC TRDV3 chr14 22938269 - TRAC chr14 23016447 + Exonic hg19 THYM TCGA-XM-A8RD 3 0 Out-of-frame Intra-chr q11.2 q11.2 54102 ChimerSeq STARFusion TCGA_RNA-Seq OTUD5-TEX101 OTUD5 chrX 48783123 - TEX101 chr19 43906918 + Exonic hg19 THYM TCGA-XM-A8RH 3 0 CDS-5'UTR Inter-chr p11.23 q13.31 54103 ChimerSeq STARFusion TCGA_RNA-Seq MIR142-MCM7 MIR142 chr17 56409831 - MCM7 chr7 99691024 - Exonic hg19 THYM TCGA-ZB-A96P 4 0 5'UTR-CDS Inter-chr q22 Tumor suppressor gene q22.1 54104 ChimerSeq STARFusion TCGA_RNA-Seq EPB41L4A-NREP EPB41L4A chr5 111504436 - NREP chr5 111071204 - Exonic hg19 THYM TCGA-ZB-A96P 3 0 In-Frame Intra-chr q22.2 q22.1 54105 ChimerSeq STARFusion TCGA_RNA-Seq MIR142-MCM7 MIR142 chr17 56409831 - MCM7 chr7 99691024 - Exonic hg19 THYM TCGA-ZB-A96R 3 1 5'UTR-CDS Inter-chr q22 Tumor suppressor gene q22.1 54106 ChimerSeq STARFusion TCGA_RNA-Seq ZNF750-TBCD ZNF750 chr17 80797803 - TBCD chr17 80828100 + Exonic hg19 THYM TCGA-XU-A933 2 2 5'UTR-CDS Intra-chr q25.3 Transcription factor 54107 ChimerSeq STARFusion TCGA_RNA-Seq MIR142-MCM7 MIR142 chr17 56409831 - MCM7 chr7 99691024 - Exonic hg19 THYM TCGA-XU-A932 3 1 5'UTR-CDS Inter-chr q22 Tumor suppressor gene q22.1 54108 ChimerSeq STARFusion TCGA_RNA-Seq ADRBK2-SYCE3 ADRBK2 chr22 26000420 + SYCE3 chr22 50994834 - Exonic hg19 THYM TCGA-ZB-A96A 2 2 CDS-5'UTR Intra-chr q13.33 54109 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80950355 - MRPS28 chr8 80831383 - Exonic hg19 THYM TCGA-XU-A936 5 14 Out-of-frame Intra-chr q21.13 q21.13 54110 ChimerSeq STARFusion TCGA_RNA-Seq RUNX3-IGLJ2 RUNX3 chr1 25227115 - IGLJ2 chr22 23241802 + Exonic hg19 THYM TCGA-XU-A936 6 0 Out-of-frame Inter-chr p36.11 Tumor suppressor gene Transcription factor q11.22 54111 ChimerSeq STARFusion TCGA_RNA-Seq ABHD17B-TMEM2 ABHD17B chr9 74477467 - TMEM2 chr9 74365301 - Exonic hg19 THYM TCGA-ZB-A96M 3 2 Out-of-frame Intra-chr q21.13 q21.13 54112 ChimerSeq STARFusion TCGA_RNA-Seq ARIH1-C19orf71 ARIH1 chr15 72864721 + C19orf71 chr19 3543233 + Exonic hg19 THYM TCGA-ZB-A96M 2 0 Out-of-frame Inter-chr q24.1 p13.3 54113 ChimerSeq STARFusion TCGA_RNA-Seq RBM6-DOCK3 RBM6 chr3 49977658 + DOCK3 chr3 50879106 + Exonic hg19 THYM TCGA-ZB-A96L 132 372 5'UTR-CDS Intra-chr p21.31 Tumor suppressor gene p21.2 Seq+ 54114 ChimerSeq STARFusion TCGA_RNA-Seq IP6K2-ALOX12P1 IP6K2 chr3 48754590 - ALOX12P1 chr17 28857326 + Exonic hg19 THYM TCGA-ZB-A96L 87 39 Out-of-frame Inter-chr p21.31 q11.2 Seq+ 54115 ChimerSeq STARFusion TCGA_RNA-Seq BTBD2-AMZ2 BTBD2 chr19 2015296 - AMZ2 chr17 66244781 + Exonic hg19 THYM TCGA-ZB-A96L 46 114 CDS-5'UTR Inter-chr p13.3 q24.2 Seq+ 54116 ChimerSeq STARFusion TCGA_RNA-Seq BTBD2-AMZ2 BTBD2 chr19 2015296 - AMZ2 chr17 66244785 + Exonic hg19 THYM TCGA-ZB-A96L 11 114 CDS-5'UTR Inter-chr p13.3 q24.2 Seq+ 54117 ChimerSeq STARFusion TCGA_RNA-Seq BTBD2-AMZ2 BTBD2 chr19 2015296 - AMZ2 chr17 66246329 + Exonic hg19 THYM TCGA-ZB-A96L 6 114 CDS-5'UTR Inter-chr p13.3 q24.2 Seq+ 54118 ChimerSeq STARFusion TCGA_RNA-Seq MYO18A-BCAS3 MYO18A chr17 27492960 - BCAS3 chr17 58987893 + Exonic hg19 THYM TCGA-ZB-A96L 21 41 In-Frame Intra-chr q11.2 Oncogene q23.2 Seq+ 54119 ChimerSeq STARFusion TCGA_RNA-Seq EPHA3-ABCA9 EPHA3 chr3 89480509 + ABCA9 chr17 67047280 - Exonic hg19 THYM TCGA-ZB-A96L 5 14 CDS-5'UTR Inter-chr p11.1 Oncogene Tumor suppressor gene q24.2 Seq+ 54120 ChimerSeq STARFusion TCGA_RNA-Seq DOCK3-TMIGD2 DOCK3 chr3 50971508 + TMIGD2 chr19 4294813 - Exonic hg19 THYM TCGA-ZB-A96L 2 25 Out-of-frame Inter-chr p21.2 p13.3 Seq+ 54121 ChimerSeq STARFusion TCGA_RNA-Seq PRKAR2A-CACNA2D3 PRKAR2A chr3 48884768 - CACNA2D3 chr3 54537519 + Exonic hg19 THYM TCGA-ZB-A96L 3 13 Out-of-frame Intra-chr p21.31 p21.1 Tumor suppressor gene Seq+ 54122 ChimerSeq STARFusion TCGA_RNA-Seq MTSS1L-PDXDC2P MTSS1L chr16 70711695 - PDXDC2P chr16 70065871 - Exonic hg19 THYM TCGA-ZB-A96L 3 12 CDS-3'UTR Intra-chr q22.1 q22.1 Seq+ 54123 ChimerSeq STARFusion TCGA_RNA-Seq MTSS1L-PDXDC2P MTSS1L chr16 70711695 - PDXDC2P chr16 70065871 - Exonic hg19 THYM TCGA-ZB-A96L 3 12 CDS-3'UTR Intra-chr q22.1 q22.1 Seq+ 54124 ChimerSeq STARFusion TCGA_RNA-Seq ELL-FKBP8 ELL chr19 18583645 - FKBP8 chr19 18644157 - Exonic hg19 THYM TCGA-ZB-A96I 7 12 In-Frame Intra-chr p13.11 p13.11 Seq+ 54125 ChimerSeq STARFusion TCGA_RNA-Seq VASP-C1orf87 VASP chr19 46011034 + C1orf87 chr1 60506803 - Exonic hg19 THYM TCGA-ZB-A96H 9 9 Out-of-frame Inter-chr q13.32 p32.1 Seq+ 54126 ChimerSeq STARFusion TCGA_RNA-Seq HTATSF1-BRS3 HTATSF1 chrX 135586622 + BRS3 chrX 135572292 + Exonic hg19 THYM TCGA-ZB-A965 4 23 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 54127 ChimerSeq STARFusion TCGA_RNA-Seq CYB5R4-RIPPLY2 CYB5R4 chr6 84574047 + RIPPLY2 chr6 84566961 + Exonic hg19 THYM TCGA-ZB-A966 3 6 Out-of-frame Intra-chr q14.2 q14.2 Seq+ 54128 ChimerSeq STARFusion TCGA_RNA-Seq RAI1-ATP5G1 RAI1 chr17 17627473 + ATP5G1 chr17 46971734 + Exonic hg19 THYM TCGA-ZB-A961 4 21 5'UTR-CDS Intra-chr p11.2 q21.32 Seq+ 54129 ChimerSeq STARFusion TCGA_RNA-Seq HDAC5-SLC13A2 HDAC5 chr17 42188097 - SLC13A2 chr17 26816232 + Exonic hg19 THYM TCGA-ZB-A961 5 13 Out-of-frame Intra-chr q21.31 q11.2 Seq+ 54130 ChimerSeq STARFusion TCGA_RNA-Seq RAI1-ATP5G1 RAI1 chr17 17627473 + ATP5G1 chr17 46970771 + Exonic hg19 THYM TCGA-ZB-A961 2 21 5'UTR-5'UTR Intra-chr p11.2 q21.32 Seq+ 54131 ChimerSeq STARFusion TCGA_RNA-Seq NPEPPS-HDAC5 NPEPPS chr17 45623359 + HDAC5 chr17 42171202 - Exonic hg19 THYM TCGA-ZB-A961 3 1 In-Frame Intra-chr q21.32 q21.31 Seq+ 54132 ChimerSeq STARFusion TCGA_RNA-Seq ZNF74-ZNRF3 ZNF74 chr22 20748952 + ZNRF3 chr22 29444377 + Exonic hg19 THYM TCGA-ZB-A963 5 3 Out-of-frame Intra-chr q11.21 Transcription factor q12.1 Seq+ 54133 ChimerSeq STARFusion TCGA_RNA-Seq ARIH1-C19orf71 ARIH1 chr15 72864721 + C19orf71 chr19 3543233 + Exonic hg19 THYM TCGA-ZB-A963 2 0 Out-of-frame Inter-chr q24.1 p13.3 54134 ChimerSeq STARFusion TCGA_RNA-Seq OTUD5-TEX101 OTUD5 chrX 48783123 - TEX101 chr19 43906918 + Exonic hg19 THYM TCGA-ZB-A963 2 0 CDS-5'UTR Inter-chr p11.23 q13.31 54135 ChimerSeq STARFusion TCGA_RNA-Seq TBCE-MAPRE2 TBCE chr1 235606226 + MAPRE2 chr18 32681910 + Exonic hg19 THYM TCGA-ZB-A962 4 4 Out-of-frame Inter-chr q12.1 Seq+ 54136 ChimerSeq STARFusion TCGA_RNA-Seq ITSN1-MAP3K7CL ITSN1 chr21 35015019 + MAP3K7CL chr21 30532262 + Exonic hg19 THYM TCGA-ZB-A969 99 233 Out-of-frame Intra-chr q22.11 q21.3 Seq+ 54137 ChimerSeq STARFusion TCGA_RNA-Seq FOXP1-FHIT FOXP1 chr3 71348971 - FHIT chr3 59738047 - Exonic hg19 THYM TCGA-ZB-A969 3 66 5'UTR-CDS Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor p14.2 Tumor suppressor gene Seq+ 54138 ChimerSeq STARFusion TCGA_RNA-Seq FAM193A-RGS12 FAM193A chr4 2641586 + RGS12 chr4 3415799 + Exonic hg19 THYM TCGA-ZB-A969 6 28 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 54139 ChimerSeq STARFusion TCGA_RNA-Seq POU2F1-ZFYVE28 POU2F1 chr1 167190195 + ZFYVE28 chr4 2321998 - Exonic hg19 THYM TCGA-ZB-A969 2 30 Out-of-frame Inter-chr q24.2 Transcription factor p16.3 Seq+ 54140 ChimerSeq STARFusion TCGA_RNA-Seq MAGI1-MITF MAGI1 chr3 66023671 - MITF chr3 69998202 + Exonic hg19 THYM TCGA-ZB-A969 2 25 Out-of-frame Intra-chr Oncogene p13 Oncogene Transcription factor Seq+ 54141 ChimerSeq STARFusion TCGA_RNA-Seq PRDM2-LRRC38 PRDM2 chr1 14075982 + LRRC38 chr1 13802567 - Exonic hg19 THYM TCGA-ZB-A969 3 12 In-Frame Intra-chr p36.21 Tumor suppressor gene Transcription factor p36.21 Seq+ 54142 ChimerSeq STARFusion TCGA_RNA-Seq DSP-HNRNPCL1 DSP chr6 7577275 + HNRNPCL1 chr1 12908323 - Exonic hg19 THYM TCGA-ZB-A969 4 2 CDS-5'UTR Inter-chr p24.3 Tumor suppressor gene 54143 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125718 - CXCL16 chr17 4637332 - Exonic hg19 THYM TCGA-ZB-A969 3 2 Out-of-frame Inter-chr q12.2 p13.2 54144 ChimerSeq STARFusion TCGA_RNA-Seq CHD6-SPEN CHD6 chr20 40246979 - SPEN chr1 16199311 + Exonic hg19 THYM TCGA-ZB-A969 2 4 5'UTR-CDS Inter-chr q12 p36.21 Transcription factor Seq+ 54145 ChimerSeq STARFusion TCGA_RNA-Seq NCKIPSD-SFMBT1 NCKIPSD chr3 48723070 - SFMBT1 chr3 52968917 - Exonic hg19 THYM TCGA-ZB-A969 2 2 Out-of-frame Intra-chr p21.31 p21.1 Seq+ 54146 ChimerSeq STARFusion TCGA_RNA-Seq MVK-IL34 MVK chr12 110017087 + IL34 chr16 70680451 + Exonic hg19 THYM TCGA-ZB-A969 2 0 CDS-5'UTR Inter-chr q24.11 q22.1 54147 ChimerSeq STARFusion TCGA_RNA-Seq CPNE2-NUP93 CPNE2 chr16 57171194 + NUP93 chr16 56857619 + Exonic hg19 UCEC TCGA-BS-A0U9-01B 16 0 In-Frame Intra-chr q13 q13 Seq+ 54148 ChimerSeq STARFusion TCGA_RNA-Seq MTMR3-HEXIM2 MTMR3 chr22 30279348 + HEXIM2 chr17 43246382 + Exonic hg19 UCEC TCGA-BS-A0U9-01B 7 0 5'UTR-CDS Inter-chr q12.2 q21.31 Seq+ 54149 ChimerSeq STARFusion TCGA_RNA-Seq UBR5-DRD4 UBR5 chr8 103424401 - DRD4 chr11 639433 + Exonic hg19 UCEC TCGA-BS-A0U9-01B 5 0 Out-of-frame Inter-chr q22.3 Oncogene p15.5 Seq+ 54150 ChimerSeq STARFusion TCGA_RNA-Seq UBR5-DRD4 UBR5 chr8 103424401 - DRD4 chr11 640401 + Exonic hg19 UCEC TCGA-BS-A0U9-01B 4 0 Out-of-frame Inter-chr q22.3 Oncogene p15.5 Seq+ 54151 ChimerSeq STARFusion TCGA_RNA-Seq ADAM9-KCNU1 ADAM9 chr8 38948865 + KCNU1 chr8 36780008 + Exonic hg19 UCEC TCGA-BS-A0U9-01B 3 0 Out-of-frame Intra-chr p11.23 54152 ChimerSeq STARFusion TCGA_RNA-Seq NT5C2-USMG5 NT5C2 chr10 104899163 - USMG5 chr10 105152223 - Exonic hg19 UCEC TCGA-BS-A0U9-01B 3 0 CDS-5'UTR Intra-chr q24.33 q24.33 54153 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC1-PLXNB1 SMARCC1 chr3 47814307 - PLXNB1 chr3 48466742 - Exonic hg19 UCEC TCGA-BS-A0U9-01B 3 0 CDS-5'UTR Intra-chr p21.31 Tumor suppressor gene p21.31 54154 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 UCEC TCGA-AX-A1C5-01A 4 0 Out-of-frame Inter-chr p22.1 54155 ChimerSeq STARFusion TCGA_RNA-Seq CLCN5-CXorf21 CLCN5 chrX 49689924 + CXorf21 chrX 30594983 - Exonic hg19 UCEC TCGA-B5-A0JV-01A 4 0 CDS-5'UTR Intra-chr p11.23 p21.2 54156 ChimerSeq STARFusion TCGA_RNA-Seq CXorf21-PAGE1 CXorf21 chrX 30594869 - PAGE1 chrX 49459381 - Exonic hg19 UCEC TCGA-B5-A0JV-01A 4 0 5'UTR-5'UTR Intra-chr p21.2 p11.23 54157 ChimerSeq STARFusion TCGA_RNA-Seq CXorf21-PAGE1 CXorf21 chrX 30594869 - PAGE1 chrX 49458804 - Exonic hg19 UCEC TCGA-B5-A0JV-01A 3 0 5'UTR-CDS Intra-chr p21.2 p11.23 54158 ChimerSeq STARFusion TCGA_RNA-Seq HAP1-TMSB10 HAP1 chr17 39877542 - TMSB10 chr2 85133701 + Exonic hg19 UCEC TCGA-D1-A1NZ-01A 4 0 Out-of-frame Inter-chr q21.2 p11.2 54159 ChimerSeq STARFusion TCGA_RNA-Seq SEPT7P2-PSPH SEPT7P2 chr7 45808259 - PSPH chr7 56088924 - Exonic hg19 UCEC TCGA-EC-A24G-01A 9 0 3'UTR-5'UTR Intra-chr p12.3 p11.2 Seq+ 54160 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPH1-CASC5 HNRNPH1 chr5 179050038 - CASC5 chr15 40951537 + Exonic hg19 UCEC TCGA-EO-A3B0-01A 2 1 Out-of-frame Inter-chr q35.3 q15.1 Oncogene 54161 ChimerSeq STARFusion TCGA_RNA-Seq USP48-IGL@ USP48 chr1 22050876 - IGL@ chr22 23247181 + Exonic hg19 UCEC TCGA-B5-A11X-01A 4 0 Out-of-frame Inter-chr p36.12 q11.22 54162 ChimerSeq STARFusion TCGA_RNA-Seq USP48-IGLJ3 USP48 chr1 22050876 - IGLJ3 chr22 23247181 + Exonic hg19 UCEC TCGA-B5-A11X-01A 4 0 Out-of-frame Inter-chr p36.12 q11.22 54163 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-GPR149 IGL@ chr22 23029741 + GPR149 chr3 154146759 - Exonic hg19 UCEC TCGA-D1-A2G6-01A 7 0 Out-of-frame Inter-chr q11.22 q25.2 54164 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB7A-MAP2K2 ZBTB7A chr19 4065428 - MAP2K2 chr19 4110653 - Exonic hg19 UCEC TCGA-EO-A22X-01A 22 56 5'UTR-CDS Intra-chr p13.3 Transcription factor p13.3 STE:STE7 Oncogene Seq+ 54165 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB7A-MAP2K2 ZBTB7A chr19 4066680 - MAP2K2 chr19 4110653 - Exonic hg19 UCEC TCGA-EO-A22X-01A 7 56 5'UTR-CDS Intra-chr p13.3 Transcription factor p13.3 STE:STE7 Oncogene Seq+ 54166 ChimerSeq STARFusion TCGA_RNA-Seq TUBGCP6-PLXNB2 TUBGCP6 chr22 50682148 - PLXNB2 chr22 50723094 - Exonic hg19 UCEC TCGA-EO-A22X-01A 3 19 In-Frame Intra-chr q13.33 q13.33 Seq+ 54167 ChimerSeq STARFusion TCGA_RNA-Seq OR10G3-IGH@ OR10G3 chr14 22038119 - IGH@ chr14 106175004 - Exonic hg19 UCEC TCGA-D1-A16J-01A 5 0 Out-of-frame Intra-chr q11.2 32.33 54168 ChimerSeq STARFusion TCGA_RNA-Seq OR10G3-IGHA1 OR10G3 chr14 22038119 - IGHA1 chr14 106175004 - Exonic hg19 UCEC TCGA-D1-A16J-01A 5 0 Out-of-frame Intra-chr q11.2 54169 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106209411 - Exonic hg19 UCEC TCGA-D1-A16J-01A 4 0 Out-of-frame Inter-chr q21.2 32.33 54170 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076851 + IGHG1 chr14 106209411 - Exonic hg19 UCEC TCGA-D1-A16J-01A 4 0 Out-of-frame Inter-chr q21.2 q32.33 54171 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL671P-HCG4P7 RN7SL671P chr4 1870886 - HCG4P7 chr6 29855588 - Exonic hg19 UCEC TCGA-D1-A16J-01A 4 0 Out-of-frame Inter-chr 54172 ChimerSeq STARFusion TCGA_RNA-Seq U3-SNORD3C U3 chr8 43233501 + SNORD3C chr17 19093498 - Exonic hg19 UCEC TCGA-BK-A0CA-01B 3 2 Out-of-frame Inter-chr p11.2 54173 ChimerSeq STARFusion TCGA_RNA-Seq NCALD-UBR5 NCALD chr8 103032465 - UBR5 chr8 103373854 - Exonic hg19 UCEC TCGA-BK-A0CA-01B 2 5 5'UTR-CDS Intra-chr q22.3 q22.3 Oncogene Seq+ 54174 ChimerSeq STARFusion TCGA_RNA-Seq RHNO1-ITFG2 RHNO1 chr12 2986448 + ITFG2 chr12 2967178 + Exonic hg19 UCEC TCGA-AP-A052-01A 11 0 Out-of-frame Intra-chr p13.33 p13.33 54175 ChimerSeq STARFusion TCGA_RNA-Seq TULP3-ITFG2 TULP3 chr12 2986448 + ITFG2 chr12 2967178 + Exonic hg19 UCEC TCGA-AP-A052-01A 11 0 Out-of-frame Intra-chr p13.33 p13.33 Seq+ 54176 ChimerSeq STARFusion TCGA_RNA-Seq CBFA2T2-DCTN3 CBFA2T2 chr20 32078107 + DCTN3 chr9 34618757 - Exonic hg19 UCEC TCGA-AP-A052-01A 6 0 Out-of-frame Inter-chr q11.21 p13.3 54177 ChimerSeq STARFusion TCGA_RNA-Seq ITPR3-ZBTB17 ITPR3 chr6 33658886 + ZBTB17 chr1 16274992 - Exonic hg19 UCEC TCGA-AP-A052-01A 5 0 CDS-5'UTR Inter-chr p21.31 p36.13 Transcription factor 54178 ChimerSeq STARFusion TCGA_RNA-Seq SLIT2-PACRGL SLIT2 chr4 20555591 + PACRGL chr4 20754250 + Exonic hg19 UCEC TCGA-AP-A052-01A 4 0 CDS-3'UTR Intra-chr p15.31 Tumor suppressor gene p15.31 Seq+ 54179 ChimerSeq STARFusion TCGA_RNA-Seq SLIT2-PACRGL SLIT2 chr4 20555591 + PACRGL chr4 20754188 + Exonic hg19 UCEC TCGA-AP-A052-01A 4 0 CDS-3'UTR Intra-chr p15.31 Tumor suppressor gene p15.31 Seq+ 54180 ChimerSeq STARFusion TCGA_RNA-Seq ACTN1-SUOX ACTN1 chr14 69376035 - SUOX chr12 56395996 + Exonic hg19 UCEC TCGA-AP-A052-01A 3 0 5'UTR-5'UTR Inter-chr q24.1 q13.2 54181 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-CORO1B MAP4 chr3 48130263 - CORO1B chr11 67205972 - Exonic hg19 UCEC TCGA-B5-A1MX-01A 18 0 5'UTR-CDS Inter-chr p21.31 q13.2 54182 ChimerSeq STARFusion TCGA_RNA-Seq RPL13-PPIC RPL13 chr16 89628116 + PPIC chr5 122372237 - Exonic hg19 UCEC TCGA-B5-A1MX-01A 4 0 Out-of-frame Inter-chr q24.3 q23.2 54183 ChimerSeq STARFusion TCGA_RNA-Seq HEPHL1-PANX1 HEPHL1 chr11 93800909 + PANX1 chr11 93862494 + Exonic hg19 UCEC TCGA-AP-A1E4-01A 5 0 Out-of-frame Intra-chr q21 q21 54184 ChimerSeq STARFusion TCGA_RNA-Seq RPL12-FAM159B RPL12 chr9 130210161 - FAM159B chr5 63986325 + Exonic hg19 UCEC TCGA-AP-A1E4-01A 3 0 Out-of-frame Inter-chr q33.3 q12.3 54185 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPL15 ZSWIM4 chr19 13942623 + RPL15 chr3 23960907 + Exonic hg19 UCEC TCGA-AP-A1E4-01A 3 0 Out-of-frame Inter-chr p13.13 p24.2 54186 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-MMP20 TMEM123 chr11 102319543 - MMP20 chr11 102449873 - Exonic hg19 UCEC TCGA-D1-A1NU-01A 32 0 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 54187 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-MMP27 TMEM123 chr11 102319543 - MMP27 chr11 102567222 - Exonic hg19 UCEC TCGA-D1-A1NU-01A 22 0 In-Frame Intra-chr q22.2 q22.2 Seq+ 54188 ChimerSeq STARFusion TCGA_RNA-Seq DDX46-CAMLG DDX46 chr5 134109551 + CAMLG chr5 134086449 + Exonic hg19 UCEC TCGA-D1-A1NU-01A 21 0 Out-of-frame Intra-chr q31.1 q31.1 54189 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A1-RSPH9 SLC7A1 chr13 30169553 - RSPH9 chr6 43623299 + Exonic hg19 UCEC TCGA-D1-A1NU-01A 21 0 5'UTR-CDS Inter-chr q12.3 p21.1 Seq+ 54190 ChimerSeq STARFusion TCGA_RNA-Seq CHD2-PDXK CHD2 chr15 93480855 + PDXK chr21 45153950 + Exonic hg19 UCEC TCGA-D1-A1NU-01A 10 0 Out-of-frame Inter-chr q26.1 q22.3 Seq+ 54191 ChimerSeq STARFusion TCGA_RNA-Seq SPTAN1-SLC27A4 SPTAN1 chr9 131329256 + SLC27A4 chr9 131105406 + Exonic hg19 UCEC TCGA-D1-A1NU-01A 9 0 CDS-5'UTR Intra-chr q34.11 q34.11 54192 ChimerSeq STARFusion TCGA_RNA-Seq METTL24-SLC22A16 METTL24 chr6 110636545 - SLC22A16 chr6 110778220 - Exonic hg19 UCEC TCGA-D1-A1NU-01A 8 0 In-Frame Intra-chr q21 q21 Seq+ 54193 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-MMP27 TMEM123 chr11 102319543 - MMP27 chr11 102567566 - Exonic hg19 UCEC TCGA-D1-A1NU-01A 6 0 In-Frame Intra-chr q22.2 q22.2 Seq+ 54194 ChimerSeq STARFusion TCGA_RNA-Seq MED25-TRPM4 MED25 chr19 50322553 + TRPM4 chr19 49669298 + Exonic hg19 UCEC TCGA-D1-A1NU-01A 5 0 In-Frame Intra-chr q13.33 q13.33 54195 ChimerSeq STARFusion TCGA_RNA-Seq HEPHL1-PANX1 HEPHL1 chr11 93800911 + PANX1 chr11 93862496 + Exonic hg19 UCEC TCGA-D1-A1NU-01A 4 0 Out-of-frame Intra-chr q21 q21 54196 ChimerSeq STARFusion TCGA_RNA-Seq MED25-TRPM4 MED25 chr19 50321873 + TRPM4 chr19 49669298 + Exonic hg19 UCEC TCGA-D1-A1NU-01A 4 0 Out-of-frame Intra-chr q13.33 q13.33 54197 ChimerSeq STARFusion TCGA_RNA-Seq CAPNS1-FTH1 CAPNS1 chr19 36631928 + FTH1 chr11 61734922 - Exonic hg19 UCEC TCGA-D1-A17U-01A 5 0 Out-of-frame Inter-chr q13.12 q12.3 54198 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1E-SZRD1 CSNK1E chr22 38694791 - SZRD1 chr1 16717870 + Exonic hg19 UCEC TCGA-D1-A0ZP-01A 9 0 Out-of-frame Inter-chr q13.1 p36.13 54199 ChimerSeq STARFusion TCGA_RNA-Seq WDR20-PPP2R5C WDR20 chr14 102606509 + PPP2R5C chr14 102384168 + Exonic hg19 UCEC TCGA-D1-A0ZP-01A 5 0 In-Frame Intra-chr q32.31 q32.31 Tumor suppressor gene Seq+ 54200 ChimerSeq STARFusion TCGA_RNA-Seq RFFL-NSF RFFL chr17 33390595 - NSF chr17 44751780 + Exonic hg19 UCEC TCGA-D1-A0ZP-01A 4 0 5'UTR-5'UTR Intra-chr q12 54201 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-ARHGEF28 MKL1 chr22 40948110 - ARHGEF28 chr5 73236669 + Exonic hg19 UCEC TCGA-AP-A053-01A 38 0 Out-of-frame Inter-chr q13.2 q13.2 54202 ChimerSeq STARFusion TCGA_RNA-Seq PSMD3-CDK12 PSMD3 chr17 38151321 + CDK12 chr17 37657503 + Exonic hg19 UCEC TCGA-AP-A053-01A 30 0 In-Frame Intra-chr q21.1 q12 Oncogene Seq+ 54203 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP8-LINC00207 ARHGAP8 chr22 45221473 + LINC00207 chr22 44967256 + Exonic hg19 UCEC TCGA-AP-A053-01A 15 0 CDS-5'UTR Intra-chr q13.31 q13.31 54204 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-ARHGEF28 MKL1 chr22 40915468 - ARHGEF28 chr5 73236669 + Exonic hg19 UCEC TCGA-AP-A053-01A 7 0 Out-of-frame Inter-chr q13.2 q13.2 54205 ChimerSeq STARFusion TCGA_RNA-Seq NCOA3-EYA2 NCOA3 chr20 46130763 + EYA2 chr20 45618640 + Exonic hg19 UCEC TCGA-AP-A053-01A 7 0 5'UTR-5'UTR Intra-chr q13.12 Transcription factor q13.12 Seq+ 54206 ChimerSeq STARFusion TCGA_RNA-Seq TUBB3-ZNF276 TUBB3 chr16 90000458 + ZNF276 chr16 89805851 + Exonic hg19 UCEC TCGA-AP-A053-01A 6 0 Out-of-frame Intra-chr q24.3 q24.3 Transcription factor 54207 ChimerSeq STARFusion TCGA_RNA-Seq NPLOC4-SIRT7 NPLOC4 chr17 79589192 - SIRT7 chr17 79872406 - Exonic hg19 UCEC TCGA-AP-A053-01A 5 0 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 54208 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC9-TSNARE1 TRAPPC9 chr8 141231558 - TSNARE1 chr8 143310940 - Exonic hg19 UCEC TCGA-AP-A053-01A 4 0 In-Frame Intra-chr q24.3 q24.3 54209 ChimerSeq STARFusion TCGA_RNA-Seq UBE2O-SRSF2 UBE2O chr17 74448807 - SRSF2 chr17 74731240 - Exonic hg19 UCEC TCGA-AP-A053-01A 4 0 CDS-3'UTR Intra-chr q25.1 q25.1 Oncogene 54210 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-RARRES2 ERBB2 chr17 37881398 + RARRES2 chr7 150037762 - Exonic hg19 UCEC TCGA-AP-A053-01A 3 0 Out-of-frame Inter-chr q12 Oncogene q36.1 54211 ChimerSeq STARFusion TCGA_RNA-Seq HEPHL1-PANX1 HEPHL1 chr11 93800911 + PANX1 chr11 93862496 + Exonic hg19 UCEC TCGA-AP-A053-01A 3 0 Out-of-frame Intra-chr q21 q21 54212 ChimerSeq STARFusion TCGA_RNA-Seq RPL12-FAM159B RPL12 chr9 130210161 - FAM159B chr5 63986325 + Exonic hg19 UCEC TCGA-AP-A053-01A 3 0 Out-of-frame Inter-chr q33.3 q12.3 54213 ChimerSeq STARFusion TCGA_RNA-Seq LRIG1-BDH1 LRIG1 chr3 66501983 - BDH1 chr3 197260432 - Exonic hg19 UCEC TCGA-FI-A2CY-01A 57 0 In-Frame Intra-chr Tumor suppressor gene 54214 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R3-ALDH3B1 PPP6R3 chr11 68228295 + ALDH3B1 chr11 67782767 + Exonic hg19 UCEC TCGA-FI-A2CY-01A 9 0 5'UTR-5'UTR Intra-chr q13.2 q13.2 54215 ChimerSeq STARFusion TCGA_RNA-Seq IKBKG-ATP2B3 IKBKG chrX 153775960 + ATP2B3 chrX 152806817 + Exonic hg19 UCEC TCGA-FI-A2CY-01A 7 0 5'UTR-CDS Intra-chr q28 q28 Seq+ 54216 ChimerSeq STARFusion TCGA_RNA-Seq MFHAS1-ANKDD1A MFHAS1 chr8 8654875 - ANKDD1A chr15 65214120 + Exonic hg19 UCEC TCGA-FI-A2CY-01A 7 0 Out-of-frame Inter-chr p23.1 q22.31 54217 ChimerSeq STARFusion TCGA_RNA-Seq MFHAS1-ANKDD1A MFHAS1 chr8 8654875 - ANKDD1A chr15 65223020 + Exonic hg19 UCEC TCGA-FI-A2CY-01A 6 0 Out-of-frame Inter-chr p23.1 q22.31 54218 ChimerSeq STARFusion TCGA_RNA-Seq AGO2-PTK2 AGO2 chr8 141645584 - PTK2 chr8 141669777 - Exonic hg19 UCEC TCGA-FI-A2CY-01A 4 0 Out-of-frame Intra-chr q24.3 q24.3 54219 ChimerSeq STARFusion TCGA_RNA-Seq GRHL2-SAP30BP GRHL2 chr8 102505017 + SAP30BP chr17 73698560 + Exonic hg19 UCEC TCGA-FI-A2CY-01A 4 0 Out-of-frame Inter-chr q22.3 Transcription factor q25.1 54220 ChimerSeq STARFusion TCGA_RNA-Seq SRC-RPN2 SRC chr20 35993680 + RPN2 chr20 35858376 + Exonic hg19 UCEC TCGA-FI-A2EX-01A 16 0 5'UTR-CDS Intra-chr q11.23 TK:Src Oncogene q11.23 Seq+ 54221 ChimerSeq STARFusion TCGA_RNA-Seq IRAK2-FANCD2 IRAK2 chr3 10268117 + FANCD2 chr3 10133865 + Exonic hg19 UCEC TCGA-FI-A2EX-01A 14 0 In-Frame Intra-chr p25.3 TKL:IRAK p25.3 Oncogene 54222 ChimerSeq STARFusion TCGA_RNA-Seq GPX4-ARID3A GPX4 chr19 1105808 + ARID3A chr19 968405 + Exonic hg19 UCEC TCGA-FI-A2EX-01A 13 0 Out-of-frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 54223 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-VMP1 BCAS3 chr17 58786686 + VMP1 chr17 57886157 + Exonic hg19 UCEC TCGA-FI-A2EX-01A 8 0 In-Frame Intra-chr q23.2 q23.1 Seq+ 54224 ChimerSeq STARFusion TCGA_RNA-Seq TATDN2-FANCD2 TATDN2 chr3 10291298 + FANCD2 chr3 10122784 + Exonic hg19 UCEC TCGA-FI-A2EX-01A 6 0 In-Frame Intra-chr p25.3 p25.3 Oncogene Seq+ 54225 ChimerSeq STARFusion TCGA_RNA-Seq CCDC37-BCAM CCDC37 chr3 126152026 + BCAM chr19 45322835 + Exonic hg19 UCEC TCGA-FI-A2EX-01A 5 0 Out-of-frame Inter-chr q13.32 54226 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC10-RPL31P50 DNAJC10 chr2 183653145 + RPL31P50 chr12 31750085 - Exonic hg19 UCEC TCGA-FI-A2EX-01A 4 0 Out-of-frame Inter-chr q32.1 p11.21 54227 ChimerSeq STARFusion TCGA_RNA-Seq GPI-GTF3C1 GPI chr19 34868491 + GTF3C1 chr16 27472239 - Exonic hg19 UCEC TCGA-FI-A2EX-01A 4 0 CDS-3'UTR Inter-chr p12.1 54228 ChimerSeq STARFusion TCGA_RNA-Seq SLC3A1-PPM1B SLC3A1 chr2 44513296 + PPM1B chr2 44471367 + Exonic hg19 UCEC TCGA-D1-A2G0-01A 40 171 CDS-3'UTR Intra-chr p21 p21 54229 ChimerSeq STARFusion TCGA_RNA-Seq ERGIC3-MAP1LC3A ERGIC3 chr20 34136618 + MAP1LC3A chr20 33147012 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 317 917 In-Frame Intra-chr q11.22 q11.22 Seq+ 54230 ChimerSeq STARFusion TCGA_RNA-Seq LDLR-MRPL4 LDLR chr19 11218190 + MRPL4 chr19 10368898 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 369 663 In-Frame Intra-chr p13.2 p13.2 Seq+ 54231 ChimerSeq STARFusion TCGA_RNA-Seq GON4L-CCT3 GON4L chr1 155726749 - CCT3 chr1 156279094 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 40 195 In-Frame Intra-chr q22 q22 Seq+ 54232 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-MGAT5B SEPT9 chr17 75369634 + MGAT5B chr17 74934070 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 29 92 Out-of-frame Intra-chr q25.2 Seq+ 54233 ChimerSeq STARFusion TCGA_RNA-Seq ADAR-UBE2J2 ADAR chr1 154580468 - UBE2J2 chr1 1203372 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 11 124 CDS-5'UTR Intra-chr q21.3 p36.33 Seq+ 54234 ChimerSeq STARFusion TCGA_RNA-Seq ADAR-UBE2J2 ADAR chr1 154600331 - UBE2J2 chr1 1203372 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 11 124 5'UTR-5'UTR Intra-chr q21.3 p36.33 Seq+ 54235 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 125051854 - SCARB1 chr12 125279814 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 20 81 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 54236 ChimerSeq STARFusion TCGA_RNA-Seq C7orf50-MAD1L1 C7orf50 chr7 1166893 - MAD1L1 chr7 2041756 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 17 82 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 54237 ChimerSeq STARFusion TCGA_RNA-Seq ADAR-UBE2J2 ADAR chr1 154580468 - UBE2J2 chr1 1198766 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 5 124 Out-of-frame Intra-chr q21.3 p36.33 Seq+ 54238 ChimerSeq STARFusion TCGA_RNA-Seq ADAR-UBE2J2 ADAR chr1 154600331 - UBE2J2 chr1 1198766 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 4 124 5'UTR-5'UTR Intra-chr q21.3 p36.33 Seq+ 54239 ChimerSeq STARFusion TCGA_RNA-Seq ADAR-UBE2J2 ADAR chr1 154600430 - UBE2J2 chr1 1198766 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 3 124 5'UTR-5'UTR Intra-chr q21.3 p36.33 Seq+ 54240 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 125051854 - SCARB1 chr12 125272003 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 13 81 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 54241 ChimerSeq STARFusion TCGA_RNA-Seq SBF1-SYCE3 SBF1 chr22 50892941 - SYCE3 chr22 50994834 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 16 51 CDS-5'UTR Intra-chr q13.33 q13.33 Seq+ 54242 ChimerSeq STARFusion TCGA_RNA-Seq NOL12-LGALS1 NOL12 chr22 38097486 + LGALS1 chr22 38074490 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 13 40 3'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 54243 ChimerSeq STARFusion TCGA_RNA-Seq TRIOBP-LGALS1 TRIOBP chr22 38097486 + LGALS1 chr22 38074490 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 13 40 Out-of-frame Intra-chr q13.1 q13.1 54244 ChimerSeq STARFusion TCGA_RNA-Seq NOL12-CDC42EP1 NOL12 chr22 38097486 + CDC42EP1 chr22 37962079 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 8 48 3'UTR-5'UTR Intra-chr q13.1 q13.1 54245 ChimerSeq STARFusion TCGA_RNA-Seq TRIOBP-CDC42EP1 TRIOBP chr22 38097486 + CDC42EP1 chr22 37962079 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 8 48 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 54246 ChimerSeq STARFusion TCGA_RNA-Seq SPECC1-STAMBP SPECC1 chr17 20163607 + STAMBP chr2 74100479 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 13 27 CDS-3'UTR Inter-chr p11.2 p13.1 Seq+ 54247 ChimerSeq STARFusion TCGA_RNA-Seq GRHL2-NCALD GRHL2 chr8 102611379 + NCALD chr8 102731876 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 9 19 CDS-5'UTR Intra-chr q22.3 Transcription factor q22.3 Seq+ 54248 ChimerSeq STARFusion TCGA_RNA-Seq SRP68-QRICH2 SRP68 chr17 74046509 - QRICH2 chr17 74287493 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 7 26 In-Frame Intra-chr q25.1 q25.1 Seq+ 54249 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-AHDC1 WASF2 chr1 27816497 - AHDC1 chr1 27875305 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 6 29 5'UTR-CDS Intra-chr p36.11 p35.3 Transcription factor Seq+ 54250 ChimerSeq STARFusion TCGA_RNA-Seq TANC1-OR7E28P TANC1 chr2 159857701 + OR7E28P chr2 159718918 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 6 25 Out-of-frame Intra-chr q24.2 q24.1 54251 ChimerSeq STARFusion TCGA_RNA-Seq RGS3-BSPRY RGS3 chr9 116346707 + BSPRY chr9 116116520 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 4 27 In-Frame Intra-chr q32 q32 Seq+ 54252 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-MYO18A FAM222B chr17 27139227 - MYO18A chr17 27494039 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 5 20 5'UTR-5'UTR Intra-chr q11.2 q11.2 Oncogene Seq+ 54253 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-MYO18A FAM222B chr17 27169700 - MYO18A chr17 27494039 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 5 20 5'UTR-5'UTR Intra-chr q11.2 q11.2 Oncogene Seq+ 54254 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-SLC44A2 DNM2 chr19 10870487 + SLC44A2 chr19 10736929 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 6 7 In-Frame Intra-chr p13.2 p13.2 Seq+ 54255 ChimerSeq STARFusion TCGA_RNA-Seq LRRC8A-MEN1 LRRC8A chr9 131644529 + MEN1 chr11 64578377 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 5 10 5'UTR-5'UTR Inter-chr q34.11 q13.1 Oncogene Tumor suppressor gene Seq+ 54256 ChimerSeq STARFusion TCGA_RNA-Seq TNRC6B-PES1 TNRC6B chr22 40552186 + PES1 chr22 31001504 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 2 18 CDS-3'UTR Intra-chr q13.1 q12.2 Seq+ 54257 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-SNTB2 NFAT5 chr16 69681070 + SNTB2 chr16 69294074 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 2 17 Out-of-frame Intra-chr q22.1 Transcription factor Seq+ 54258 ChimerSeq STARFusion TCGA_RNA-Seq SMIM4-NISCH SMIM4 chr3 52570789 + NISCH chr3 52504875 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 2 17 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 54259 ChimerSeq STARFusion TCGA_RNA-Seq SMIM4-NISCH SMIM4 chr3 52570922 + NISCH chr3 52504875 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 2 17 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 54260 ChimerSeq STARFusion TCGA_RNA-Seq STRBP-DENND1A STRBP chr9 126030715 - DENND1A chr9 126165769 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 4 8 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 54261 ChimerSeq STARFusion TCGA_RNA-Seq NDC1-SSBP3 NDC1 chr1 54252831 - SSBP3 chr1 54747200 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 5 3 Out-of-frame Intra-chr p32.3 p32.3 Seq+ 54262 ChimerSeq STARFusion TCGA_RNA-Seq MAPK8IP3-HN1L MAPK8IP3 chr16 1756658 + HN1L chr16 1747813 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 3 6 In-Frame Intra-chr p13.3 Seq+ 54263 ChimerSeq STARFusion TCGA_RNA-Seq TET3-SPECC1 TET3 chr2 74230293 + SPECC1 chr17 19999944 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 2 7 5'UTR-5'UTR Inter-chr p13.1 Transcription factor p11.2 Seq+ 54264 ChimerSeq STARFusion TCGA_RNA-Seq COL27A1-SLC31A1 COL27A1 chr9 116925065 + SLC31A1 chr9 116018394 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 3 2 CDS-5'UTR Intra-chr q32 q32 54265 ChimerSeq STARFusion TCGA_RNA-Seq RBM47-APBB2 RBM47 chr4 40631413 - APBB2 chr4 40818276 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 2 5 5'UTR-CDS Intra-chr p14 p13 Seq+ 54266 ChimerSeq STARFusion TCGA_RNA-Seq SLC12A7-TERT SLC12A7 chr5 1060459 - TERT chr5 1282739 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 2 4 Out-of-frame Intra-chr p15.33 p15.33 Oncogene Seq+ 54267 ChimerSeq STARFusion TCGA_RNA-Seq ASXL1-DEFB123 ASXL1 chr20 30954269 + DEFB123 chr20 30037832 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 2 3 Out-of-frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 54268 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3B-PPP1R16A FNDC3B chr3 171944737 + PPP1R16A chr8 145715417 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 2 2 CDS-5'UTR Inter-chr q26.31 q24.3 54269 ChimerSeq STARFusion TCGA_RNA-Seq TCF7L1-KCMF1 TCF7L1 chr2 85361573 + KCMF1 chr2 85255012 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 2 2 Out-of-frame Intra-chr p11.2 Oncogene Transcription factor p11.2 Transcription factor Seq+ 54270 ChimerSeq STARFusion TCGA_RNA-Seq TMEM131-DLGAP1 TMEM131 chr2 98449828 - DLGAP1 chr18 4151287 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 2 2 CDS-5'UTR Inter-chr q11.2 p11.31 54271 ChimerSeq STARFusion TCGA_RNA-Seq ZNF738-CHMP1A ZNF738 chr19 21558766 + CHMP1A chr16 89713739 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 2 1 5'UTR-CDS Inter-chr p12 q24.3 Seq+ 54272 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D32-PRPSAP2 TBC1D32 chr6 121484116 - PRPSAP2 chr17 18781011 + Exonic hg19 UCEC TCGA-EY-A1GP-01A 2 1 Out-of-frame Inter-chr q22.31 p11.2 54273 ChimerSeq STARFusion TCGA_RNA-Seq KDM2A-RHOD KDM2A chr11 66888829 + RHOD chr11 66833367 + Exonic hg19 UCEC TCGA-AP-A5FX-01A 23 77 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 54274 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2-SEC22B NOTCH2 chr1 120529583 - SEC22B chr1 145112373 + Exonic hg19 UCEC TCGA-AP-A5FX-01A 11 68 In-Frame Intra-chr p12 Oncogene Tumor suppressor gene p12 Seq+ 54275 ChimerSeq STARFusion TCGA_RNA-Seq ZNF564-CACNA1A ZNF564 chr19 12662144 - CACNA1A chr19 13630317 - Exonic hg19 UCEC TCGA-AP-A5FX-01A 10 35 CDS-5'UTR Intra-chr p13.2 Transcription factor p13.13 Seq+ 54276 ChimerSeq STARFusion TCGA_RNA-Seq EDEM1-ITPR1 EDEM1 chr3 5236966 + ITPR1 chr3 4887823 + Exonic hg19 UCEC TCGA-AP-A5FX-01A 9 12 In-Frame Intra-chr p26.1 p26.1 Seq+ 54277 ChimerSeq STARFusion TCGA_RNA-Seq ACP2-MRPL48 ACP2 chr11 47266856 - MRPL48 chr11 73555852 + Exonic hg19 UCEC TCGA-AP-A5FX-01A 3 30 In-Frame Intra-chr p11.2 q13.4 Seq+ 54278 ChimerSeq STARFusion TCGA_RNA-Seq ACP2-MRPL48 ACP2 chr11 47266286 - MRPL48 chr11 73555852 + Exonic hg19 UCEC TCGA-AP-A5FX-01A 2 30 Out-of-frame Intra-chr p11.2 q13.4 Seq+ 54279 ChimerSeq STARFusion TCGA_RNA-Seq DDX23-FKBP11 DDX23 chr12 49245867 - FKBP11 chr12 49319461 - Exonic hg19 UCEC TCGA-AP-A5FX-01A 4 14 5'UTR-5'UTR Intra-chr q13.12 q13.12 54280 ChimerSeq STARFusion TCGA_RNA-Seq MYO6-DEPTOR MYO6 chr6 76527381 + DEPTOR chr8 120977472 + Exonic hg19 UCEC TCGA-AP-A5FX-01A 2 17 Out-of-frame Inter-chr q14.1 q24.12 Seq+ 54281 ChimerSeq STARFusion TCGA_RNA-Seq CPAMD8-LILRA6 CPAMD8 chr19 17006987 - LILRA6 chr19 54722282 - Exonic hg19 UCEC TCGA-AP-A5FX-01A 3 6 CDS-3'UTR Intra-chr p13.11 54282 ChimerSeq STARFusion TCGA_RNA-Seq CPAMD8-LILRB3 CPAMD8 chr19 17006987 - LILRB3 chr19 54722282 - Exonic hg19 UCEC TCGA-AP-A5FX-01A 3 6 Out-of-frame Intra-chr p13.11 Seq+ 54283 ChimerSeq STARFusion TCGA_RNA-Seq PTGR1-PTBP3 PTGR1 chr9 114359597 - PTBP3 chr9 115060196 - Exonic hg19 UCEC TCGA-AP-A5FX-01A 3 3 Out-of-frame Intra-chr q31.3 q32 Seq+ 54284 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC1-SYCP2L SMARCC1 chr3 47814307 - SYCP2L chr6 10942910 + Exonic hg19 UCEC TCGA-AP-A5FX-01A 2 4 In-Frame Inter-chr p21.31 Tumor suppressor gene p24.2 Seq+ 54285 ChimerSeq STARFusion TCGA_RNA-Seq ARAP3-CTBP2 ARAP3 chr5 141045991 - CTBP2 chr10 126678267 - Exonic hg19 UCEC TCGA-AP-A5FX-01A 2 1 Out-of-frame Inter-chr q31.3 q26.13 Seq+ 54286 ChimerSeq STARFusion TCGA_RNA-Seq CUTA-GRM4 CUTA chr6 33384874 - GRM4 chr6 33990647 - Exonic hg19 UCEC TCGA-DI-A1NN-01A 8 0 Out-of-frame Intra-chr p21.31 Seq+ 54287 ChimerSeq STARFusion TCGA_RNA-Seq XPR1-MSMP XPR1 chr1 180601406 + MSMP chr9 35753765 - Exonic hg19 UCEC TCGA-DI-A1NN-01A 5 0 Out-of-frame Inter-chr q25.3 p13.3 54288 ChimerSeq STARFusion TCGA_RNA-Seq HSPA1B-C2 HSPA1B chr6 31797391 + C2 chr6 31868874 + Exonic hg19 UCEC TCGA-DI-A1NN-01A 4 0 Out-of-frame Intra-chr p21.33 54289 ChimerSeq STARFusion TCGA_RNA-Seq HSPA1B-C2 HSPA1B chr6 31797317 + C2 chr6 31868874 + Exonic hg19 UCEC TCGA-A5-A1OF-01A 5 0 Out-of-frame Intra-chr p21.33 54290 ChimerSeq STARFusion TCGA_RNA-Seq RLBP1-IFITM1 RLBP1 chr15 89754987 - IFITM1 chr11 314942 + Exonic hg19 UCEC TCGA-A5-A1OF-01A 5 0 Out-of-frame Inter-chr q26.1 p15.5 Oncogene 54291 ChimerSeq STARFusion TCGA_RNA-Seq RLBP1-IFITM2 RLBP1 chr15 89754987 - IFITM2 chr11 309033 + Exonic hg19 UCEC TCGA-A5-A1OF-01A 5 0 Out-of-frame Inter-chr q26.1 p15.5 54292 ChimerSeq STARFusion TCGA_RNA-Seq HSPA1B-C2 HSPA1B chr6 31797384 + C2 chr6 31868874 + Exonic hg19 UCEC TCGA-A5-A1OF-01A 4 0 Out-of-frame Intra-chr p21.33 54293 ChimerSeq STARFusion TCGA_RNA-Seq RPS27-FAM159B RPS27 chr1 153963699 + FAM159B chr5 63986324 + Exonic hg19 UCEC TCGA-A5-A1OF-01A 4 0 3'UTR-5'UTR Inter-chr q21.3 q12.3 54294 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 UCEC TCGA-A5-A1OF-01A 4 0 Out-of-frame Inter-chr p13.13 q13.1 54295 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD6-PSAP ANKRD6 chr6 90272273 + PSAP chr10 73580042 - Exonic hg19 UCEC TCGA-A5-A1OF-01A 3 0 Out-of-frame Inter-chr q15 q22.1 54296 ChimerSeq STARFusion TCGA_RNA-Seq C4B-C2 C4B chr6 31994820 + C2 chr6 31868874 + Exonic hg19 UCEC TCGA-A5-A1OF-01A 3 0 Out-of-frame Intra-chr p21.33 54297 ChimerSeq STARFusion TCGA_RNA-Seq CAPNS1-EIF1 CAPNS1 chr19 36631929 + EIF1 chr17 39845243 + Exonic hg19 UCEC TCGA-A5-A1OF-01A 3 0 Out-of-frame Inter-chr q13.12 q21.2 54298 ChimerSeq STARFusion TCGA_RNA-Seq CTSD-ZNF536 CTSD chr11 1782538 - ZNF536 chr19 31039210 + Exonic hg19 UCEC TCGA-A5-A1OF-01A 3 0 Out-of-frame Inter-chr p15.5 q12 Transcription factor 54299 ChimerSeq STARFusion TCGA_RNA-Seq FTH1-NRXN2 FTH1 chr11 61734841 - NRXN2 chr11 64390518 - Exonic hg19 UCEC TCGA-A5-A1OF-01A 3 0 Out-of-frame Intra-chr q12.3 q13.1 54300 ChimerSeq STARFusion TCGA_RNA-Seq GAPDH-PDE6A GAPDH chr12 6646176 + PDE6A chr5 149246803 - Exonic hg19 UCEC TCGA-A5-A1OF-01A 3 0 Out-of-frame Inter-chr p13.31 q32 54301 ChimerSeq STARFusion TCGA_RNA-Seq HSPA1B-C2 HSPA1B chr6 31796367 + C2 chr6 31868874 + Exonic hg19 UCEC TCGA-A5-A1OF-01A 3 0 Out-of-frame Intra-chr p21.33 54302 ChimerSeq STARFusion TCGA_RNA-Seq HSPA1B-C2 HSPA1B chr6 31796552 + C2 chr6 31868874 + Exonic hg19 UCEC TCGA-A5-A1OF-01A 3 0 Out-of-frame Intra-chr p21.33 54303 ChimerSeq STARFusion TCGA_RNA-Seq HSPA1B-C2 HSPA1B chr6 31797012 + C2 chr6 31868874 + Exonic hg19 UCEC TCGA-A5-A1OF-01A 3 0 Out-of-frame Intra-chr p21.33 54304 ChimerSeq STARFusion TCGA_RNA-Seq HSPA1B-C2 HSPA1B chr6 31797234 + C2 chr6 31868874 + Exonic hg19 UCEC TCGA-A5-A1OF-01A 3 0 Out-of-frame Intra-chr p21.33 54305 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-INPP5A IGH@ chr14 106111040 - INPP5A chr10 134511407 + Exonic hg19 UCEC TCGA-A5-A1OF-01A 3 0 Out-of-frame Inter-chr 32.33 q26.3 54306 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-INPP5A IGHG1 chr14 106209321 - INPP5A chr10 134511407 + Exonic hg19 UCEC TCGA-A5-A1OF-01A 3 0 Out-of-frame Inter-chr q32.33 q26.3 54307 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-TYRO3 IGKC chr2 89156966 - TYRO3 chr15 41854865 + Exonic hg19 UCEC TCGA-A5-A1OF-01A 3 0 Out-of-frame Inter-chr p11.2 q15.1 TK:Axl 54308 ChimerSeq STARFusion TCGA_RNA-Seq TDH-HSP90B1 TDH chr8 11219262 + HSP90B1 chr12 104336942 + Exonic hg19 UCEC TCGA-A5-A1OF-01A 3 0 Out-of-frame Inter-chr p23.1 q23.3 Tumor suppressor gene 54309 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-MTRNR2L9 ZSWIM4 chr19 13942623 + MTRNR2L9 chr6 62284055 + Exonic hg19 UCEC TCGA-A5-A1OF-01A 3 0 Out-of-frame Inter-chr p13.13 q11.1 54310 ChimerSeq STARFusion TCGA_RNA-Seq VAPB-GNAS VAPB chr20 56964573 + GNAS chr20 57470667 + Exonic hg19 UCEC TCGA-KP-A3VZ-01A 48 632 In-Frame Intra-chr q13.32 q13.32 Oncogene Seq+ 54311 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPL-SEPW1 HNRNPL chr19 39332253 - SEPW1 chr19 48283982 + Exonic hg19 UCEC TCGA-KP-A3VZ-01A 78 264 Out-of-frame Intra-chr Seq+ 54312 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC1-MAP4 SMARCC1 chr3 47814307 - MAP4 chr3 47899002 - Exonic hg19 UCEC TCGA-KP-A3VZ-01A 60 192 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 54313 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPL-TPRX1 HNRNPL chr19 39331741 - TPRX1 chr19 48306028 - Exonic hg19 UCEC TCGA-KP-A3VZ-01A 42 236 Out-of-frame Intra-chr q13.33 Transcription factor Seq+ 54314 ChimerSeq STARFusion TCGA_RNA-Seq YAP1-BIRC2 YAP1 chr11 101985125 + BIRC2 chr11 102233627 + Exonic hg19 UCEC TCGA-KP-A3VZ-01A 62 143 CDS-5'UTR Intra-chr q22.1 Tumor suppressor gene q22.2 Oncogene Seq+ 54315 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPL-SEPW1 HNRNPL chr19 39334482 - SEPW1 chr19 48283982 + Exonic hg19 UCEC TCGA-KP-A3VZ-01A 23 264 Out-of-frame Intra-chr Seq+ 54316 ChimerSeq STARFusion TCGA_RNA-Seq PAX8-IL36B PAX8 chr2 114035947 - IL36B chr2 113788732 - Exonic hg19 UCEC TCGA-KP-A3VZ-01A 17 92 In-Frame Intra-chr q14.1 Oncogene Transcription factor q14.1 Seq+ 54317 ChimerSeq STARFusion TCGA_RNA-Seq EVPL-SAP30BP EVPL chr17 74017549 - SAP30BP chr17 73687474 + Exonic hg19 UCEC TCGA-KP-A3VZ-01A 26 53 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 54318 ChimerSeq STARFusion TCGA_RNA-Seq RYR1-ZNF383 RYR1 chr19 39068844 + ZNF383 chr19 37733371 + Exonic hg19 UCEC TCGA-KP-A3VZ-01A 16 90 Out-of-frame Intra-chr q13.2 q13.12 Transcription factor Seq+ 54319 ChimerSeq STARFusion TCGA_RNA-Seq FIGN-STK25 FIGN chr2 164591413 - STK25 chr2 242441123 - Exonic hg19 UCEC TCGA-KP-A3VZ-01A 8 103 Out-of-frame Intra-chr q24.3 q37.3 Seq+ 54320 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHG4B-MELK PLEKHG4B chr5 151714 + MELK chr9 36674831 + Exonic hg19 UCEC TCGA-KP-A3VZ-01A 7 88 In-Frame Inter-chr p15.33 p13.2 CAMK:CAMKL Seq+ 54321 ChimerSeq STARFusion TCGA_RNA-Seq FIGN-STK25 FIGN chr2 164592348 - STK25 chr2 242441123 - Exonic hg19 UCEC TCGA-KP-A3VZ-01A 2 103 5'UTR-CDS Intra-chr q24.3 q37.3 Seq+ 54322 ChimerSeq STARFusion TCGA_RNA-Seq RYR1-ZNF383 RYR1 chr19 39070768 + ZNF383 chr19 37733371 + Exonic hg19 UCEC TCGA-KP-A3VZ-01A 4 90 Out-of-frame Intra-chr q13.2 q13.12 Transcription factor Seq+ 54323 ChimerSeq STARFusion TCGA_RNA-Seq CDC37-PDE4A CDC37 chr19 10514054 - PDE4A chr19 10574469 + Exonic hg19 UCEC TCGA-KP-A3VZ-01A 6 33 In-Frame Intra-chr p13.2 p13.2 Seq+ 54324 ChimerSeq STARFusion TCGA_RNA-Seq CREBBP-IFT140 CREBBP chr16 3860604 - IFT140 chr16 1642589 - Exonic hg19 UCEC TCGA-KP-A3VZ-01A 8 23 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 54325 ChimerSeq STARFusion TCGA_RNA-Seq C6orf62-KIAA0319 C6orf62 chr6 24716329 - KIAA0319 chr6 24596295 - Exonic hg19 UCEC TCGA-KP-A3VZ-01A 3 26 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 54326 ChimerSeq STARFusion TCGA_RNA-Seq ZNF174-CLUAP1 ZNF174 chr16 3451270 + CLUAP1 chr16 3562383 + Exonic hg19 UCEC TCGA-KP-A3VZ-01A 8 3 5'UTR-CDS Intra-chr p13.3 Transcription factor p13.3 Seq+ 54327 ChimerSeq STARFusion TCGA_RNA-Seq SCAF8-TIAM2 SCAF8 chr6 155055064 + TIAM2 chr6 155448624 + Exonic hg19 UCEC TCGA-KP-A3VZ-01A 6 5 CDS-5'UTR Intra-chr q25.2 q25.2 54328 ChimerSeq STARFusion TCGA_RNA-Seq ZNF174-CLUAP1 ZNF174 chr16 3451285 + CLUAP1 chr16 3562383 + Exonic hg19 UCEC TCGA-KP-A3VZ-01A 6 3 5'UTR-CDS Intra-chr p13.3 Transcription factor p13.3 Seq+ 54329 ChimerSeq STARFusion TCGA_RNA-Seq NCAM1-POU2AF1 NCAM1 chr11 112832386 + POU2AF1 chr11 111229643 - Exonic hg19 UCEC TCGA-KP-A3VZ-01A 2 17 In-Frame Intra-chr q23.2 q23.1 Transcription factor Seq+ 54330 ChimerSeq STARFusion TCGA_RNA-Seq RNF180-CWC27 RNF180 chr5 63626233 + CWC27 chr5 64267530 + Exonic hg19 UCEC TCGA-KP-A3VZ-01A 2 16 In-Frame Intra-chr q12.3 Tumor suppressor gene q12.3 Seq+ 54331 ChimerSeq STARFusion TCGA_RNA-Seq ACVR2A-EPC2 ACVR2A chr2 148676161 + EPC2 chr2 149447783 + Exonic hg19 UCEC TCGA-KP-A3VZ-01A 4 6 Out-of-frame Intra-chr q22.3 Oncogene q23.1 Seq+ 54332 ChimerSeq STARFusion TCGA_RNA-Seq SLIT2-PACRGL SLIT2 chr4 20270504 + PACRGL chr4 20728908 + Exonic hg19 UCEC TCGA-KP-A3VZ-01A 2 7 Out-of-frame Intra-chr p15.31 Tumor suppressor gene p15.31 Seq+ 54333 ChimerSeq STARFusion TCGA_RNA-Seq STK24-PDE1A STK24 chr13 99228999 - PDE1A chr2 183387113 - Exonic hg19 UCEC TCGA-KP-A3VZ-01A 2 6 Out-of-frame Inter-chr q32.2 q32.1 Seq+ 54334 ChimerSeq STARFusion TCGA_RNA-Seq SCAF8-TIAM2 SCAF8 chr6 155055064 + TIAM2 chr6 155265250 + Exonic hg19 UCEC TCGA-KP-A3VZ-01A 2 5 CDS-5'UTR Intra-chr q25.2 q25.2 54335 ChimerSeq STARFusion TCGA_RNA-Seq SRPK2-LINC01004 SRPK2 chr7 105029095 - LINC01004 chr7 104623138 - Exonic hg19 UCEC TCGA-KP-A3VZ-01A 2 2 Out-of-frame Intra-chr q22.3 CMGC:SRPK q22.3 54336 ChimerSeq STARFusion TCGA_RNA-Seq COL14A1-DEPTOR COL14A1 chr8 121137579 + DEPTOR chr8 121061815 + Exonic hg19 UCEC TCGA-D1-A0ZQ-01A 19 0 5'UTR-CDS Intra-chr q24.12 q24.12 Seq+ 54337 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-DEFB117 TPX2 chr20 30347982 + DEFB117 chr20 29948576 + Exonic hg19 UCEC TCGA-D1-A0ZQ-01A 4 0 Out-of-frame Intra-chr q11.21 q11.21 54338 ChimerSeq STARFusion TCGA_RNA-Seq LDHB-CTNNA2 LDHB chr12 21790005 - CTNNA2 chr2 80620336 + Exonic hg19 UCEC TCGA-AJ-A3QS-01A 36 181 In-Frame Inter-chr p12.1 p12 Tumor suppressor gene Seq+ 54339 ChimerSeq STARFusion TCGA_RNA-Seq SKIV2L-HCP5 SKIV2L chr6 31935154 + HCP5 chr6 31444804 + Exonic hg19 UCEC TCGA-AJ-A3QS-01A 21 44 CDS-3'UTR Intra-chr p21.33 Seq+ 54340 ChimerSeq STARFusion TCGA_RNA-Seq GABPA-JAM2 GABPA chr21 27113986 + JAM2 chr21 27078291 + Exonic hg19 UCEC TCGA-AJ-A3QS-01A 16 63 Out-of-frame Intra-chr q21.3 Transcription factor q21.3 Seq+ 54341 ChimerSeq STARFusion TCGA_RNA-Seq CYB5B-SNTB2 CYB5B chr16 69493024 + SNTB2 chr16 69293953 + Exonic hg19 UCEC TCGA-AJ-A3QS-01A 5 34 In-Frame Intra-chr q22.1 54342 ChimerSeq STARFusion TCGA_RNA-Seq MAN1A2-TTF2 MAN1A2 chr1 118003234 + TTF2 chr1 117641455 + Exonic hg19 UCEC TCGA-AJ-A3QS-01A 6 30 Out-of-frame Intra-chr p12 p13.1 Seq+ 54343 ChimerSeq STARFusion TCGA_RNA-Seq MBOAT2-IGSF1 MBOAT2 chr2 9143669 - IGSF1 chrX 130423249 - Exonic hg19 UCEC TCGA-AJ-A3QS-01A 5 20 CDS-5'UTR Inter-chr p25.1 q26.2 Seq+ 54344 ChimerSeq STARFusion TCGA_RNA-Seq KIF24-ABCC8 KIF24 chr9 34329104 - ABCC8 chr11 17438509 - Exonic hg19 UCEC TCGA-AJ-A3QS-01A 2 18 5'UTR-CDS Inter-chr p13.3 p15.1 54345 ChimerSeq STARFusion TCGA_RNA-Seq STIM1-GPR160 STIM1 chr11 3877639 + GPR160 chr3 169797562 + Exonic hg19 UCEC TCGA-AJ-A3QS-01A 2 15 CDS-5'UTR Inter-chr p15.4 q26.2 Seq+ 54346 ChimerSeq STARFusion TCGA_RNA-Seq TCF7L2-VTI1A TCF7L2 chr10 114724383 + VTI1A chr10 114575049 + Exonic hg19 UCEC TCGA-AJ-A3QS-01A 3 9 Out-of-frame Intra-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q25.2 Seq+ 54347 ChimerSeq STARFusion TCGA_RNA-Seq TMEM63B-EFCAB14 TMEM63B chr6 44095603 + EFCAB14 chr1 47157609 - Exonic hg19 UCEC TCGA-AJ-A3QS-01A 3 5 Out-of-frame Inter-chr p21.1 p33 Seq+ 54348 ChimerSeq STARFusion TCGA_RNA-Seq SSBP4-SLC5A5 SSBP4 chr19 18544627 + SLC5A5 chr19 17994659 + Exonic hg19 UCEC TCGA-AJ-A3QS-01A 3 4 In-Frame Intra-chr p13.11 p13.11 Seq+ 54349 ChimerSeq STARFusion TCGA_RNA-Seq CCZ1B-NAA11 CCZ1B chr7 6851583 - NAA11 chr4 80147424 - Exonic hg19 UCEC TCGA-AJ-A3QS-01A 2 7 CDS-3'UTR Inter-chr p22.1 q21.21 Seq+ 54350 ChimerSeq STARFusion TCGA_RNA-Seq RARA-LTBP1 RARA chr17 38474700 + LTBP1 chr2 33447147 + Exonic hg19 UCEC TCGA-AJ-A3QS-01A 3 2 5'UTR-CDS Inter-chr q21.2 Oncogene Transcription factor p22.3 Seq+ 54351 ChimerSeq STARFusion TCGA_RNA-Seq TMEM63B-EFCAB14 TMEM63B chr6 44094809 + EFCAB14 chr1 47157609 - Exonic hg19 UCEC TCGA-AJ-A3QS-01A 2 5 Out-of-frame Inter-chr p21.1 p33 Seq+ 54352 ChimerSeq STARFusion TCGA_RNA-Seq TMEM63B-EFCAB14 TMEM63B chr6 44095415 + EFCAB14 chr1 47157609 - Exonic hg19 UCEC TCGA-AJ-A3QS-01A 2 5 Out-of-frame Inter-chr p21.1 p33 Seq+ 54353 ChimerSeq STARFusion TCGA_RNA-Seq EFCAB11-TTC7B EFCAB11 chr14 90397885 - TTC7B chr14 91044652 - Exonic hg19 UCEC TCGA-AJ-A3QS-01A 2 4 Out-of-frame Intra-chr q32.11 q32.11 Seq+ 54354 ChimerSeq STARFusion TCGA_RNA-Seq ITGB5-SLC12A8 ITGB5 chr3 124605778 - SLC12A8 chr3 124839530 - Exonic hg19 UCEC TCGA-AJ-A3QS-01A 2 3 In-Frame Intra-chr q21.2 q21.2 Seq+ 54355 ChimerSeq STARFusion TCGA_RNA-Seq SH3KBP1-RPS6KA3 SH3KBP1 chrX 19854243 - RPS6KA3 chrX 20227522 - Exonic hg19 UCEC TCGA-AJ-A3QS-01A 2 2 In-Frame Intra-chr p22.12 p22.12 54356 ChimerSeq STARFusion TCGA_RNA-Seq RALY-CHMP4B RALY chr20 32581937 + CHMP4B chr20 32436273 + Exonic hg19 UCEC TCGA-A5-A2K5-01A 2 9 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 54357 ChimerSeq STARFusion TCGA_RNA-Seq UBC-SERF2 UBC chr12 125396278 - SERF2 chr15 44085210 + Exonic hg19 UCEC TCGA-A5-A2K5-01A 3 1 Out-of-frame Inter-chr q24.31 q15.3 54358 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-RPL30 CPSF6 chr12 69656342 + RPL30 chr8 99054078 - Exonic hg19 UCEC TCGA-A5-A2K5-01A 2 1 3'UTR-CDS Inter-chr q15 q22.2 54359 ChimerSeq STARFusion TCGA_RNA-Seq PDXDC2P-PDPR PDXDC2P chr16 70065803 - PDPR chr16 70190640 + Exonic hg19 UCEC TCGA-AJ-A5DV-01A 3 13 3'UTR-CDS Intra-chr q22.1 q22.1 54360 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH4-IGH@ NOTCH4 chr6 32163911 - IGH@ chr14 106330827 - Exonic hg19 UCEC TCGA-AJ-A5DV-01A 3 0 Out-of-frame Inter-chr Oncogene 32.33 54361 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH4-IGHJ3 NOTCH4 chr6 32163911 - IGHJ3 chr14 106330827 - Exonic hg19 UCEC TCGA-AJ-A5DV-01A 3 0 Out-of-frame Inter-chr Oncogene q32.33 54362 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-IFI6 WASF2 chr1 27816497 - IFI6 chr1 27995857 - Exonic hg19 UCEC TCGA-DI-A2QT-01A 3 7 5'UTR-5'UTR Intra-chr p36.11 p35.3 Seq+ 54363 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHF1-SLC35A4 PLEKHF1 chr19 30166061 + SLC35A4 chr5 139948327 + Exonic hg19 UCEC TCGA-DI-A2QT-01A 3 2 Out-of-frame Inter-chr q12 q31.3 Seq+ 54364 ChimerSeq STARFusion TCGA_RNA-Seq APLP2-RPL23 APLP2 chr11 129999097 + RPL23 chr17 37006652 - Exonic hg19 UCEC TCGA-DI-A2QT-01A 3 1 Out-of-frame Inter-chr q24.3 q12 54365 ChimerSeq STARFusion TCGA_RNA-Seq RPL23-SMARCA5 RPL23 chr17 37009275 - SMARCA5 chr4 144464662 + Exonic hg19 UCEC TCGA-DI-A2QT-01A 2 1 In-Frame Inter-chr q12 q31.21 54366 ChimerSeq STARFusion TCGA_RNA-Seq RPS6-RPL23 RPS6 chr9 19378366 - RPL23 chr17 37009358 - Exonic hg19 UCEC TCGA-DI-A2QT-01A 2 1 3'UTR-CDS Inter-chr p22.1 q12 54367 ChimerSeq STARFusion TCGA_RNA-Seq U3-SNORD3C U3 chr9 90989256 + SNORD3C chr17 19093486 - Exonic hg19 UCEC TCGA-AJ-A3EL-01A 40 0 Out-of-frame Inter-chr p11.2 54368 ChimerSeq STARFusion TCGA_RNA-Seq CCDC37-BCAM CCDC37 chr3 126152026 + BCAM chr19 45322835 + Exonic hg19 UCEC TCGA-AX-A1CR-01A 48 0 Out-of-frame Inter-chr q13.32 54369 ChimerSeq STARFusion TCGA_RNA-Seq SYMPK-IGFL4 SYMPK chr19 46351010 - IGFL4 chr19 46563551 - Exonic hg19 UCEC TCGA-AX-A1CR-01A 11 0 CDS-5'UTR Intra-chr q13.32 q13.32 54370 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890980 - BCAR4 chr16 11914154 - Exonic hg19 UCEC TCGA-AX-A1CR-01A 5 0 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 54371 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-EIF3K ACTN4 chr19 39138547 + EIF3K chr19 39123070 + Exonic hg19 UCEC TCGA-AX-A1CR-01A 4 0 In-Frame Intra-chr Seq+ 54372 ChimerSeq STARFusion TCGA_RNA-Seq FNIP1-LMNB1 FNIP1 chr5 131132523 - LMNB1 chr5 126140468 + Exonic hg19 UCEC TCGA-AX-A1CR-01A 4 0 In-Frame Intra-chr q31.1 q23.2 54373 ChimerSeq STARFusion TCGA_RNA-Seq MSLN-C5orf47 MSLN chr16 817465 + C5orf47 chr5 173416244 + Exonic hg19 UCEC TCGA-AX-A1CR-01A 4 0 Out-of-frame Inter-chr p13.3 q35.2 54374 ChimerSeq STARFusion TCGA_RNA-Seq WAC-BCAM WAC chr10 28911374 + BCAM chr19 45324581 + Exonic hg19 UCEC TCGA-AX-A1CR-01A 4 0 Out-of-frame Inter-chr p12.1 q13.32 54375 ChimerSeq STARFusion TCGA_RNA-Seq FARP2-INHA FARP2 chr2 242312705 + INHA chr2 220439416 + Exonic hg19 UCEC TCGA-EO-A3AV-01A 4 21 Out-of-frame Intra-chr q37.3 q35 Seq+ 54376 ChimerSeq STARFusion TCGA_RNA-Seq ZEB1-B2M ZEB1 chr10 31608221 + B2M chr15 45007621 + Exonic hg19 UCEC TCGA-EO-A3AV-01A 2 1 In-Frame Inter-chr p11.22 Transcription factor Oncogene 54377 ChimerSeq STARFusion TCGA_RNA-Seq ADD2-IGH@ ADD2 chr2 70915213 - IGH@ chr14 106330470 - Exonic hg19 UCEC TCGA-A5-A2K3-01A 8 0 Out-of-frame Inter-chr p13.3 32.33 54378 ChimerSeq STARFusion TCGA_RNA-Seq IGLC3-AR IGLC3 chr22 23248961 + AR chrX 66764976 + Exonic hg19 UCEC TCGA-A5-A2K3-01A 6 0 Out-of-frame Inter-chr q11.22 q12 Oncogene Tumor suppressor gene Transcription factor 54379 ChimerSeq STARFusion TCGA_RNA-Seq ADD2-IGHJ4 ADD2 chr2 70915213 - IGHJ4 chr14 106330470 - Exonic hg19 UCEC TCGA-A5-A2K3-01A 4 0 Out-of-frame Inter-chr p13.3 54380 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-TMEM127 IGKC chr2 89156803 - TMEM127 chr2 96917958 - Exonic hg19 UCEC TCGA-A5-A2K3-01A 3 1 Out-of-frame Intra-chr p11.2 q11.2 Tumor suppressor gene 54381 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R18-IGH@ PPP1R18 chr6 30653448 - IGH@ chr14 106330472 - Exonic hg19 UCEC TCGA-A5-A2K3-01A 3 1 Out-of-frame Inter-chr p21.33 32.33 54382 ChimerSeq STARFusion TCGA_RNA-Seq MPP5-RAD51B MPP5 chr14 67784196 + RAD51B chr14 68878141 + Exonic hg19 UCEC TCGA-D1-A1O0-01A 8 0 In-Frame Intra-chr q23.3 q24.1 Seq+ 54383 ChimerSeq STARFusion TCGA_RNA-Seq FRYL-TXK FRYL chr4 48686690 - TXK chr4 48114529 - Exonic hg19 UCEC TCGA-D1-A1O0-01A 6 0 5'UTR-CDS Intra-chr p11 p12 TK:Tec Seq+ 54384 ChimerSeq STARFusion TCGA_RNA-Seq AKAP8L-BRD4 AKAP8L chr19 15507961 - BRD4 chr19 15383944 - Exonic hg19 UCEC TCGA-D1-A1O0-01A 5 0 CDS-5'UTR Intra-chr p13.12 Transcription factor p13.12 Atypical:BRD Seq+ 54385 ChimerSeq STARFusion TCGA_RNA-Seq TMEM104-SLC9A3R1 TMEM104 chr17 72773514 + SLC9A3R1 chr17 72758151 + Exonic hg19 UCEC TCGA-EO-A3AS-01A 10 16 In-Frame Intra-chr q25.1 q25.1 Tumor suppressor gene Seq+ 54386 ChimerSeq STARFusion TCGA_RNA-Seq RGL2-DAXX RGL2 chr6 33266232 - DAXX chr6 33291807 - Exonic hg19 UCEC TCGA-EO-A3AS-01A 4 29 CDS-5'UTR Intra-chr Oncogene Seq+ 54387 ChimerSeq STARFusion TCGA_RNA-Seq PMVK-PYGO2 PMVK chr1 154904828 - PYGO2 chr1 154932322 - Exonic hg19 UCEC TCGA-EO-A3AS-01A 3 30 In-Frame Intra-chr q21.3 q21.3 Seq+ 54388 ChimerSeq STARFusion TCGA_RNA-Seq ELMO1-HDAC9 ELMO1 chr7 37488278 - HDAC9 chr7 18535885 + Exonic hg19 UCEC TCGA-EO-A3AS-01A 3 19 5'UTR-5'UTR Intra-chr p14.1 p21.1 Seq+ 54389 ChimerSeq STARFusion TCGA_RNA-Seq ALK-SCEL ALK chr2 29754781 - SCEL chr13 78202082 + Exonic hg19 UCEC TCGA-EO-A3AS-01A 4 14 In-Frame Inter-chr p23.1 TK:ALK Oncogene q22.3 Seq+ 54390 ChimerSeq STARFusion TCGA_RNA-Seq ELMO1-HDAC9 ELMO1 chr7 37488463 - HDAC9 chr7 18535885 + Exonic hg19 UCEC TCGA-EO-A3AS-01A 2 19 5'UTR-5'UTR Intra-chr p14.1 p21.1 Seq+ 54391 ChimerSeq STARFusion TCGA_RNA-Seq TMEM104-SLC9A3R1 TMEM104 chr17 72772716 + SLC9A3R1 chr17 72758151 + Exonic hg19 UCEC TCGA-EO-A3AS-01A 2 16 5'UTR-CDS Intra-chr q25.1 q25.1 Tumor suppressor gene Seq+ 54392 ChimerSeq STARFusion TCGA_RNA-Seq USP9X-CD244 USP9X chrX 40945362 + CD244 chr1 160808839 - Exonic hg19 UCEC TCGA-EO-A3AS-01A 2 9 5'UTR-CDS Inter-chr p11.4 Oncogene q23.3 Seq+ 54393 ChimerSeq STARFusion TCGA_RNA-Seq LOXL3-M1AP LOXL3 chr2 74777312 - M1AP chr2 74786001 - Exonic hg19 UCEC TCGA-EO-A3AS-01A 2 3 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 54394 ChimerSeq STARFusion TCGA_RNA-Seq SMARCA4-C19orf38 SMARCA4 chr19 11123788 + C19orf38 chr19 10968992 + Exonic hg19 UCEC TCGA-D1-A16S-01A 10 0 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 54395 ChimerSeq STARFusion TCGA_RNA-Seq CBFB-NMRAL1 CBFB chr16 67116211 + NMRAL1 chr16 4531880 - Exonic hg19 UCEC TCGA-D1-A16S-01A 5 0 CDS-5'UTR Intra-chr q22.1 p13.3 54396 ChimerSeq STARFusion TCGA_RNA-Seq LAMA5-CABLES2 LAMA5 chr20 60900372 - CABLES2 chr20 60964604 - Exonic hg19 UCEC TCGA-D1-A16S-01A 5 0 CDS-3'UTR Intra-chr q13.33 q13.33 Seq+ 54397 ChimerSeq STARFusion TCGA_RNA-Seq MSL1-GRB7 MSL1 chr17 38282659 + GRB7 chr17 37898505 + Exonic hg19 UCEC TCGA-D1-A16S-01A 5 0 Out-of-frame Intra-chr q21.1 q12 54398 ChimerSeq STARFusion TCGA_RNA-Seq SNX24-SNCAIP SNX24 chr5 122281854 + SNCAIP chr5 121776324 + Exonic hg19 UCEC TCGA-D1-A16S-01A 5 0 In-Frame Intra-chr q23.2 q23.2 Seq+ 54399 ChimerSeq STARFusion TCGA_RNA-Seq EPS8L2-B4GALNT4 EPS8L2 chr11 724829 + B4GALNT4 chr11 375461 + Exonic hg19 UCEC TCGA-AP-A0LI-01A 13 0 In-Frame Intra-chr p15.5 p15.5 54400 ChimerSeq STARFusion TCGA_RNA-Seq ZNF3-ACTL6B ZNF3 chr7 99677159 - ACTL6B chr7 100247758 - Exonic hg19 UCEC TCGA-AP-A0LI-01A 10 0 5'UTR-CDS Intra-chr q22.1 Transcription factor q22.1 54401 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC2-FBF1 SMARCC2 chr12 56557364 - FBF1 chr17 73908388 - Exonic hg19 UCEC TCGA-AP-A0LI-01A 7 0 3'UTR-CDS Inter-chr q13.2 q25.1 54402 ChimerSeq STARFusion TCGA_RNA-Seq EGLN2-SIPA1L3 EGLN2 chr19 41305167 + SIPA1L3 chr19 38689029 + Exonic hg19 UCEC TCGA-AP-A0LI-01A 5 0 5'UTR-CDS Intra-chr q13.2 q13.13 54403 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-NEU1 ZBTB12 chr6 31868873 - NEU1 chr6 31827099 - Exonic hg19 UCEC TCGA-AP-A0LI-01A 5 0 Out-of-frame Intra-chr p21.33 Transcription factor 54404 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 UCEC TCGA-AP-A0LI-01A 5 0 Out-of-frame Inter-chr p13.13 q13.1 54405 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-TYRO3 IGKC chr2 89156966 - TYRO3 chr15 41854865 + Exonic hg19 UCEC TCGA-AP-A0LI-01A 4 0 Out-of-frame Inter-chr p11.2 q15.1 TK:Axl 54406 ChimerSeq STARFusion TCGA_RNA-Seq JUP-CAMTA2 JUP chr17 39919235 - CAMTA2 chr17 4885455 - Exonic hg19 UCEC TCGA-AP-A0LI-01A 4 0 In-Frame Intra-chr q21.2 Tumor suppressor gene p13.2 Transcription factor 54407 ChimerSeq STARFusion TCGA_RNA-Seq PTMA-GLI2 PTMA chr2 232573297 + GLI2 chr2 121747778 + Exonic hg19 UCEC TCGA-AP-A0LI-01A 4 0 Out-of-frame Intra-chr q37.1 q14.2 Transcription factor 54408 ChimerSeq STARFusion TCGA_RNA-Seq ACIN1-RPL28 ACIN1 chr14 23564688 - RPL28 chr19 55899687 + Exonic hg19 UCEC TCGA-AP-A0LI-01A 3 0 Out-of-frame Inter-chr q11.2 q13.42 54409 ChimerSeq STARFusion TCGA_RNA-Seq ARID1A-NUDC ARID1A chr1 27059283 + NUDC chr1 27250580 + Exonic hg19 UCEC TCGA-AP-A0LI-01A 3 0 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 Seq+ 54410 ChimerSeq STARFusion TCGA_RNA-Seq CTNNA1-MGME1 CTNNA1 chr5 138163407 + MGME1 chr20 17970582 + Exonic hg19 UCEC TCGA-AP-A0LI-01A 3 0 Out-of-frame Inter-chr q31.2 Oncogene p11.23 54411 ChimerSeq STARFusion TCGA_RNA-Seq CTNNA1-MGME1 CTNNA1 chr5 138163407 + MGME1 chr20 17968809 + Exonic hg19 UCEC TCGA-AP-A0LI-01A 3 0 Out-of-frame Inter-chr q31.2 Oncogene p11.23 54412 ChimerSeq STARFusion TCGA_RNA-Seq PSMB4-STEAP1B PSMB4 chr1 151372155 + STEAP1B chr7 22459281 - Exonic hg19 UCEC TCGA-AP-A0LI-01A 3 0 Out-of-frame Inter-chr q21.3 p15.3 54413 ChimerSeq STARFusion TCGA_RNA-Seq RPL27-CCDC57 RPL27 chr17 41154760 + CCDC57 chr17 80086381 - Exonic hg19 UCEC TCGA-AP-A0LI-01A 3 0 Out-of-frame Intra-chr q21.31 q25.3 54414 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31831073 - Exonic hg19 UCEC TCGA-AP-A0LI-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 54415 ChimerSeq STARFusion TCGA_RNA-Seq PRR5L-ITPA PRR5L chr11 36424928 + ITPA chr20 3202487 + Exonic hg19 UCEC TCGA-AJ-A3NF-01A 14 70 Out-of-frame Inter-chr p13 p13 Seq+ 54416 ChimerSeq STARFusion TCGA_RNA-Seq HADH-HPGD HADH chr4 108911220 + HPGD chr4 175429943 - Exonic hg19 UCEC TCGA-AJ-A3NF-01A 9 36 In-Frame Intra-chr q25 q34.1 Tumor suppressor gene Seq+ 54417 ChimerSeq STARFusion TCGA_RNA-Seq TATDN1-CCT2 TATDN1 chr8 125551266 - CCT2 chr12 69980050 + Exonic hg19 UCEC TCGA-AJ-A3NF-01A 6 7 Out-of-frame Inter-chr q24.13 q15 Seq+ 54418 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125718 - CXCL16 chr17 4637332 - Exonic hg19 UCEC TCGA-AJ-A3NF-01A 4 11 Out-of-frame Inter-chr q12.2 p13.2 54419 ChimerSeq STARFusion TCGA_RNA-Seq MYO5C-HAUS8 MYO5C chr15 52536553 - HAUS8 chr19 17163776 - Exonic hg19 UCEC TCGA-AJ-A3NF-01A 3 15 Out-of-frame Inter-chr q21.2 p13.11 Seq+ 54420 ChimerSeq STARFusion TCGA_RNA-Seq APITD1-PGD APITD1 chr1 10500470 + PGD chr1 10473119 + Exonic hg19 UCEC TCGA-AJ-A3NF-01A 4 9 In-Frame Intra-chr Tumor suppressor gene p36.22 54421 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125699 - CXCL16 chr17 4637313 - Exonic hg19 UCEC TCGA-AJ-A3NF-01A 3 11 Out-of-frame Inter-chr q12.2 p13.2 54422 ChimerSeq STARFusion TCGA_RNA-Seq RIF1-PDE11A RIF1 chr2 152318980 + PDE11A chr2 178592900 - Exonic hg19 UCEC TCGA-AJ-A3NF-01A 3 9 In-Frame Intra-chr q23.3 q31.2 Seq+ 54423 ChimerSeq STARFusion TCGA_RNA-Seq SARNP-KRT8 SARNP chr12 56189809 - KRT8 chr12 53298811 - Exonic hg19 UCEC TCGA-AJ-A3NF-01A 3 8 Out-of-frame Intra-chr q13.2 q13.13 54424 ChimerSeq STARFusion TCGA_RNA-Seq VPS53-LRP1B VPS53 chr17 463666 - LRP1B chr2 142012210 - Exonic hg19 UCEC TCGA-AJ-A3NF-01A 2 0 Out-of-frame Inter-chr Tumor suppressor gene q22.2 Oncogene Tumor suppressor gene 54425 ChimerSeq STARFusion TCGA_RNA-Seq CC2D1A-RLN3 CC2D1A chr19 14024451 + RLN3 chr19 14141522 + Exonic hg19 UCEC TCGA-B5-A1MS-01B 17 60 In-Frame Intra-chr p13.12 Transcription factor p13.12 Seq+ 54426 ChimerSeq STARFusion TCGA_RNA-Seq CC2D1A-C19orf57 CC2D1A chr19 14017314 + C19orf57 chr19 13996868 - Exonic hg19 UCEC TCGA-B5-A1MS-01B 19 50 In-Frame Intra-chr p13.12 Transcription factor p13.12 Seq+ 54427 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2B-LAMC3 GATAD2B chr1 153895209 - LAMC3 chr9 133936422 + Exonic hg19 UCEC TCGA-B5-A1MS-01B 9 21 5'UTR-CDS Inter-chr Transcription factor q34.12 Seq+ 54428 ChimerSeq STARFusion TCGA_RNA-Seq LAMA5-RBBP8NL LAMA5 chr20 60908431 - RBBP8NL chr20 60986052 - Exonic hg19 UCEC TCGA-B5-A1MS-01B 5 29 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 54429 ChimerSeq STARFusion TCGA_RNA-Seq LRBA-DLG2 LRBA chr4 151271144 - DLG2 chr11 83770527 - Exonic hg19 UCEC TCGA-B5-A1MS-01B 5 20 Out-of-frame Inter-chr q31.3 q14.1 Seq+ 54430 ChimerSeq STARFusion TCGA_RNA-Seq PLRG1-SRGAP2B PLRG1 chr4 155471452 - SRGAP2B chr1 144013901 + Exonic hg19 UCEC TCGA-B5-A1MS-01B 2 7 Out-of-frame Inter-chr q31.3 q21.1 Seq+ 54431 ChimerSeq STARFusion TCGA_RNA-Seq LARS2-SACM1L LARS2 chr3 45500378 + SACM1L chr3 45754629 + Exonic hg19 UCEC TCGA-B5-A1MS-01B 2 4 In-Frame Intra-chr p21.31 p21.31 Seq+ 54432 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D22A-GTSE1 TBC1D22A chr22 47433094 + GTSE1 chr22 46704047 + Exonic hg19 UCEC TCGA-B5-A1MS-01B 2 4 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 54433 ChimerSeq STARFusion TCGA_RNA-Seq KIF5B-ZEB1 KIF5B chr10 32337392 - ZEB1 chr10 31784705 + Exonic hg19 UCEC TCGA-B5-A1MS-01B 2 3 In-Frame Intra-chr p11.22 p11.22 Transcription factor 54434 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31802758 + C2 chr6 31868874 + Exonic hg19 UCEC TCGA-B5-A11P-01B 5 0 Out-of-frame Intra-chr p21.33 54435 ChimerSeq STARFusion TCGA_RNA-Seq CD74-LY6E CD74 chr5 149786800 - LY6E chr8 144103189 + Exonic hg19 UCEC TCGA-B5-A11P-01B 4 0 Out-of-frame Inter-chr q33.1 54436 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL671P-HCG4P7 RN7SL671P chr4 1870886 - HCG4P7 chr6 29855588 - Exonic hg19 UCEC TCGA-B5-A11P-01B 4 0 Out-of-frame Inter-chr 54437 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-NEU1 ZBTB12 chr6 31868873 - NEU1 chr6 31827099 - Exonic hg19 UCEC TCGA-B5-A11P-01B 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 54438 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-MTRNR2L9 ZSWIM4 chr19 13942623 + MTRNR2L9 chr6 62284055 + Exonic hg19 UCEC TCGA-B5-A11P-01B 4 0 Out-of-frame Inter-chr p13.13 q11.1 54439 ChimerSeq STARFusion TCGA_RNA-Seq GALNT14-BRE GALNT14 chr2 31360824 - BRE chr2 28117400 + Exonic hg19 UCEC TCGA-BG-A0MT-01A 11 0 CDS-5'UTR Intra-chr p23.1 54440 ChimerSeq STARFusion TCGA_RNA-Seq GALNT14-MRPL33 GALNT14 chr2 31360824 - MRPL33 chr2 28117400 + Exonic hg19 UCEC TCGA-BG-A0MT-01A 11 0 3'UTR-3'UTR Intra-chr p23.1 p23.2 54441 ChimerSeq STARFusion TCGA_RNA-Seq LRRC58-IGH@ LRRC58 chr3 120045662 - IGH@ chr14 106330459 - Exonic hg19 UCEC TCGA-BG-A0M8-01A 15 0 Out-of-frame Inter-chr q13.33 32.33 54442 ChimerSeq STARFusion TCGA_RNA-Seq LRRC58-IGHJ4 LRRC58 chr3 120045662 - IGHJ4 chr14 106330459 - Exonic hg19 UCEC TCGA-BG-A0M8-01A 15 0 Out-of-frame Inter-chr q13.33 54443 ChimerSeq STARFusion TCGA_RNA-Seq LRRC58-IGHG3 LRRC58 chr3 120045665 - IGHG3 chr14 106330462 - Exonic hg19 UCEC TCGA-BG-A0M8-01A 10 0 Out-of-frame Inter-chr q13.33 54444 ChimerSeq STARFusion TCGA_RNA-Seq LRRC58-IGH@ LRRC58 chr3 120045663 - IGH@ chr14 106330059 - Exonic hg19 UCEC TCGA-BG-A0M8-01A 6 0 Out-of-frame Inter-chr q13.33 32.33 54445 ChimerSeq STARFusion TCGA_RNA-Seq FBXL4-USP45 FBXL4 chr6 99347144 - USP45 chr6 99969039 - Exonic hg19 UCEC TCGA-BG-A0M8-01A 4 0 CDS-5'UTR Intra-chr q16.2 q16.2 54446 ChimerSeq STARFusion TCGA_RNA-Seq IGL@-SCYL1 IGL@ chr22 22735710 + SCYL1 chr11 65292871 + Exonic hg19 UCEC TCGA-BG-A0M8-01A 4 0 Out-of-frame Inter-chr q11.22 q13.1 Other:SCY1 Tumor suppressor gene 54447 ChimerSeq STARFusion TCGA_RNA-Seq LRRC58-IGHD LRRC58 chr3 120045662 - IGHD chr14 106330459 - Exonic hg19 UCEC TCGA-BG-A0M8-01A 4 0 Out-of-frame Inter-chr q13.33 54448 ChimerSeq STARFusion TCGA_RNA-Seq FGFR2-KIAA1598 FGFR2 chr10 123243212 - KIAA1598 chr10 118708508 - Exonic hg19 UCEC TCGA-5B-A90C 128 1067 In-Frame Intra-chr q26.13 TK:FGFR Oncogene Seq+ 54449 ChimerSeq STARFusion TCGA_RNA-Seq WDHD1-DLGAP5 WDHD1 chr14 55493429 - DLGAP5 chr14 55621524 - Exonic hg19 UCEC TCGA-5B-A90C 79 195 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 54450 ChimerSeq STARFusion TCGA_RNA-Seq RQCD1-ARPC2 RQCD1 chr2 219433701 + ARPC2 chr2 219103387 + Exonic hg19 UCEC TCGA-5B-A90C 16 290 Out-of-frame Intra-chr q35 Seq+ 54451 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF2-PAQR6 ARHGEF2 chr1 155935094 - PAQR6 chr1 156214194 - Exonic hg19 UCEC TCGA-5B-A90C 33 210 In-Frame Intra-chr q22 q22 Seq+ 54452 ChimerSeq STARFusion TCGA_RNA-Seq MED1-GSDMB MED1 chr17 37575970 - GSDMB chr17 38062524 - Exonic hg19 UCEC TCGA-5B-A90C 38 168 In-Frame Intra-chr q12 Tumor suppressor gene q21.1 Seq+ 54453 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF2-PAQR6 ARHGEF2 chr1 155934799 - PAQR6 chr1 156214589 - Exonic hg19 UCEC TCGA-5B-A90C 11 210 Out-of-frame Intra-chr q22 q22 Seq+ 54454 ChimerSeq STARFusion TCGA_RNA-Seq ZMIZ1-C10orf11 ZMIZ1 chr10 80878781 + C10orf11 chr10 77795766 + Exonic hg19 UCEC TCGA-5B-A90C 16 129 5'UTR-CDS Intra-chr q22.3 Seq+ 54455 ChimerSeq STARFusion TCGA_RNA-Seq MED1-GSDMB MED1 chr17 37575970 - GSDMB chr17 38063240 - Exonic hg19 UCEC TCGA-5B-A90C 5 168 In-Frame Intra-chr q12 Tumor suppressor gene q21.1 Seq+ 54456 ChimerSeq STARFusion TCGA_RNA-Seq STON2-RPGRIP1 STON2 chr14 81837332 - RPGRIP1 chr14 21756098 + Exonic hg19 UCEC TCGA-5B-A90C 11 8 CDS-5'UTR Intra-chr q31.1 q11.2 Seq+ 54457 ChimerSeq STARFusion TCGA_RNA-Seq DNM1L-FGD4 DNM1L chr12 32884877 + FGD4 chr12 32791589 + Exonic hg19 UCEC TCGA-5B-A90C 4 30 In-Frame Intra-chr p11.21 p11.21 Seq+ 54458 ChimerSeq STARFusion TCGA_RNA-Seq RERE-ENO1 RERE chr1 8763117 - ENO1 chr1 8934979 - Exonic hg19 UCEC TCGA-5B-A90C 4 29 Out-of-frame Intra-chr p36.23 p36.23 Seq+ 54459 ChimerSeq STARFusion TCGA_RNA-Seq NR2F6-PLVAP NR2F6 chr19 17351480 - PLVAP chr19 17477004 - Exonic hg19 UCEC TCGA-5B-A90C 7 13 Out-of-frame Intra-chr p13.11 Transcription factor p13.11 Seq+ 54460 ChimerSeq STARFusion TCGA_RNA-Seq EYA2-SLC2A10 EYA2 chr20 45644936 + SLC2A10 chr20 45353680 + Exonic hg19 UCEC TCGA-5B-A90C 5 18 In-Frame Intra-chr q13.12 q13.12 Seq+ 54461 ChimerSeq STARFusion TCGA_RNA-Seq AMBRA1-HARBI1 AMBRA1 chr11 46563495 - HARBI1 chr11 46625459 - Exonic hg19 UCEC TCGA-5B-A90C 3 25 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 54462 ChimerSeq STARFusion TCGA_RNA-Seq RERE-ENO1 RERE chr1 8763114 - ENO1 chr1 8934976 - Exonic hg19 UCEC TCGA-5B-A90C 2 29 5'UTR-5'UTR Intra-chr p36.23 p36.23 Seq+ 54463 ChimerSeq STARFusion TCGA_RNA-Seq KEAP1-AP1M2 KEAP1 chr19 10597424 - AP1M2 chr19 10690534 - Exonic hg19 UCEC TCGA-5B-A90C 3 21 In-Frame Intra-chr p13.2 Oncogene p13.2 Seq+ 54464 ChimerSeq STARFusion TCGA_RNA-Seq EYA2-SLC2A10 EYA2 chr20 45633723 + SLC2A10 chr20 45353680 + Exonic hg19 UCEC TCGA-5B-A90C 2 18 In-Frame Intra-chr q13.12 q13.12 Seq+ 54465 ChimerSeq STARFusion TCGA_RNA-Seq GBF1-SFTPD GBF1 chr10 104005538 + SFTPD chr10 81697984 - Exonic hg19 UCEC TCGA-5B-A90C 4 10 5'UTR-CDS Intra-chr q24.32 q22.3 Seq+ 54466 ChimerSeq STARFusion TCGA_RNA-Seq EML4-PKDCC EML4 chr2 42553392 + PKDCC chr2 42280379 + Exonic hg19 UCEC TCGA-5B-A90C 4 9 Out-of-frame Intra-chr p21 Oncogene p21 Seq+ 54467 ChimerSeq STARFusion TCGA_RNA-Seq DHX34-SAE1 DHX34 chr19 47865950 + SAE1 chr19 47712416 + Exonic hg19 UCEC TCGA-5B-A90C 3 11 In-Frame Intra-chr q13.32 q13.32 Seq+ 54468 ChimerSeq STARFusion TCGA_RNA-Seq UHRF1-HDGFRP2 UHRF1 chr19 4932968 + HDGFRP2 chr19 4488673 + Exonic hg19 UCEC TCGA-5B-A90C 4 7 Out-of-frame Intra-chr p13.3 54469 ChimerSeq STARFusion TCGA_RNA-Seq GBF1-SFTPD GBF1 chr10 104005538 + SFTPD chr10 81700544 - Exonic hg19 UCEC TCGA-5B-A90C 3 10 5'UTR-CDS Intra-chr q24.32 q22.3 Seq+ 54470 ChimerSeq STARFusion TCGA_RNA-Seq GEMIN2-CTAGE5 GEMIN2 chr14 39601272 + CTAGE5 chr14 39746138 + Exonic hg19 UCEC TCGA-5B-A90C 4 5 In-Frame Intra-chr q21.1 q21.1 Seq+ 54471 ChimerSeq STARFusion TCGA_RNA-Seq RAB11FIP3-PLEC RAB11FIP3 chr16 532736 + PLEC chr8 145012860 - Exonic hg19 UCEC TCGA-5B-A90C 4 5 Out-of-frame Inter-chr q24.3 Seq+ 54472 ChimerSeq STARFusion TCGA_RNA-Seq HAPLN3-RLBP1 HAPLN3 chr15 89430406 - RLBP1 chr15 89762306 - Exonic hg19 UCEC TCGA-5B-A90C 2 8 CDS-5'UTR Intra-chr q26.1 q26.1 Seq+ 54473 ChimerSeq STARFusion TCGA_RNA-Seq GOSR1-DGAT2 GOSR1 chr17 28819771 + DGAT2 chr11 75507373 + Exonic hg19 UCEC TCGA-5B-A90C 3 2 Out-of-frame Inter-chr q11.2 q13.5 Seq+ 54474 ChimerSeq STARFusion TCGA_RNA-Seq RPS10-CUEDC1 RPS10 chr6 34392446 - CUEDC1 chr17 55963240 - Exonic hg19 UCEC TCGA-5B-A90C 2 4 5'UTR-5'UTR Inter-chr p21.31 q22 54475 ChimerSeq STARFusion TCGA_RNA-Seq ZMIZ1-CPEB3 ZMIZ1 chr10 80976031 + CPEB3 chr10 93904869 - Exonic hg19 UCEC TCGA-5B-A90C 2 4 In-Frame Intra-chr q22.3 q23.32 Seq+ 54476 ChimerSeq STARFusion TCGA_RNA-Seq KMT2E-LHFPL3 KMT2E chr7 104654982 + LHFPL3 chr7 104546634 + Exonic hg19 UCEC TCGA-5B-A90C 2 0 Out-of-frame Intra-chr q22.3 q22.2 54477 ChimerSeq STARFusion TCGA_RNA-Seq SLC38A1-GTSE1 SLC38A1 chr12 46662648 - GTSE1 chr22 46719087 + Exonic hg19 UCEC TCGA-AX-A3G3-01A 6 56 5'UTR-CDS Inter-chr q13.11 q13.31 Seq+ 54478 ChimerSeq STARFusion TCGA_RNA-Seq PPP1CB-PI4KB PPP1CB chr2 28975042 + PI4KB chr1 151280277 - Exonic hg19 UCEC TCGA-AX-A3G3-01A 4 18 Out-of-frame Inter-chr p23.2 q21.3 Seq+ 54479 ChimerSeq STARFusion TCGA_RNA-Seq PRUNE-PI4KB PRUNE chr1 150998149 + PI4KB chr1 151282731 - Exonic hg19 UCEC TCGA-AX-A3G3-01A 2 22 Out-of-frame Intra-chr q21.3 Seq+ 54480 ChimerSeq STARFusion TCGA_RNA-Seq PRUNE-PI4KB PRUNE chr1 150998149 + PI4KB chr1 151280277 - Exonic hg19 UCEC TCGA-AX-A3G3-01A 2 22 Out-of-frame Intra-chr q21.3 Seq+ 54481 ChimerSeq STARFusion TCGA_RNA-Seq CDC42BPB-LINC00605 CDC42BPB chr14 103523336 - LINC00605 chr14 103654607 - Exonic hg19 UCEC TCGA-AX-A3G3-01A 2 9 Out-of-frame Intra-chr q32.32 q32.32 54482 ChimerSeq STARFusion TCGA_RNA-Seq ASAP2-LINC00299 ASAP2 chr2 9484929 + LINC00299 chr2 8383771 - Exonic hg19 UCEC TCGA-AX-A3G3-01A 2 8 CDS-3'UTR Intra-chr p25.1 p25.1 54483 ChimerSeq STARFusion TCGA_RNA-Seq CEPT1-MOV10 CEPT1 chr1 111703918 + MOV10 chr1 113231557 + Exonic hg19 UCEC TCGA-AX-A3G3-01A 2 8 In-Frame Intra-chr p13.3 p13.2 Seq+ 54484 ChimerSeq STARFusion TCGA_RNA-Seq TGOLN2-IMMT TGOLN2 chr2 85552038 - IMMT chr2 86372004 - Exonic hg19 UCEC TCGA-PG-A7D5-01A 16 35 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 54485 ChimerSeq STARFusion TCGA_RNA-Seq MPDZ-ITPK1 MPDZ chr9 13247634 - ITPK1 chr14 93408249 - Exonic hg19 UCEC TCGA-PG-A7D5-01A 6 28 Out-of-frame Inter-chr p23 Seq+ 54486 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-MECOM TPX2 chr20 30330450 + MECOM chr3 168867543 - Exonic hg19 UCEC TCGA-PG-A7D5-01A 7 22 5'UTR-5'UTR Inter-chr q11.21 q26.2 Transcription factor Seq+ 54487 ChimerSeq STARFusion TCGA_RNA-Seq SORT1-PSMA5 SORT1 chr1 109910030 - PSMA5 chr1 109944712 - Exonic hg19 UCEC TCGA-PG-A7D5-01A 7 20 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 54488 ChimerSeq STARFusion TCGA_RNA-Seq CDON-DCPS CDON chr11 125848199 - DCPS chr11 126215242 + Exonic hg19 UCEC TCGA-PG-A7D5-01A 5 23 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 54489 ChimerSeq STARFusion TCGA_RNA-Seq BCAS3-VMP1 BCAS3 chr17 59118253 + VMP1 chr17 57895073 + Exonic hg19 UCEC TCGA-PG-A7D5-01A 3 30 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 54490 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-MECOM TPX2 chr20 30330450 + MECOM chr3 168861620 - Exonic hg19 UCEC TCGA-PG-A7D5-01A 2 22 5'UTR-5'UTR Inter-chr q11.21 q26.2 Transcription factor Seq+ 54491 ChimerSeq STARFusion TCGA_RNA-Seq PRR14L-CC2D1A PRR14L chr22 32134373 - CC2D1A chr19 14034146 + Exonic hg19 UCEC TCGA-PG-A7D5-01A 3 12 In-Frame Inter-chr q12.2 p13.12 Transcription factor Seq+ 54492 ChimerSeq STARFusion TCGA_RNA-Seq ADCY9-CLUAP1 ADCY9 chr16 4163751 - CLUAP1 chr16 3569903 + Exonic hg19 UCEC TCGA-PG-A7D5-01A 4 6 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 54493 ChimerSeq STARFusion TCGA_RNA-Seq KIF3B-REM1 KIF3B chr20 30865568 + REM1 chr20 30070090 + Exonic hg19 UCEC TCGA-PG-A7D5-01A 4 6 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 54494 ChimerSeq STARFusion TCGA_RNA-Seq ADCY9-CLUAP1 ADCY9 chr16 4163751 - CLUAP1 chr16 3573158 + Exonic hg19 UCEC TCGA-PG-A7D5-01A 2 6 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 54495 ChimerSeq STARFusion TCGA_RNA-Seq ASNA1-DHPS ASNA1 chr19 12849472 + DHPS chr19 12791139 - Exonic hg19 UCEC TCGA-PG-A7D5-01A 2 5 In-Frame Intra-chr p13.13 p13.13 Seq+ 54496 ChimerSeq STARFusion TCGA_RNA-Seq XRN1-ATR XRN1 chr3 142116171 - ATR chr3 142172075 - Exonic hg19 UCEC TCGA-PG-A7D5-01A 2 3 CDS-3'UTR Intra-chr q23 q23 Atypical:PIKK Oncogene Tumor suppressor gene 54497 ChimerSeq STARFusion TCGA_RNA-Seq NSD1-UBE2D2 NSD1 chr5 176563031 + UBE2D2 chr5 138979957 + Exonic hg19 UCEC TCGA-PG-A7D5-01A 2 0 In-Frame Intra-chr q35.3 Oncogene q31.2 54498 ChimerSeq STARFusion TCGA_RNA-Seq PARVA-SPON1 PARVA chr11 12499496 + SPON1 chr11 14156966 + Exonic hg19 UCEC TCGA-EO-A3KU-01A 13 19 In-Frame Intra-chr p15.3 p15.2 Seq+ 54499 ChimerSeq STARFusion TCGA_RNA-Seq TEAD1-CTR9 TEAD1 chr11 12923660 + CTR9 chr11 10784978 + Exonic hg19 UCEC TCGA-EO-A3KU-01A 7 27 In-Frame Intra-chr p15.3 Transcription factor p15.4 Seq+ 54500 ChimerSeq STARFusion TCGA_RNA-Seq NDUFV2-TRIM5 NDUFV2 chr18 9126905 + TRIM5 chr11 5688941 - Exonic hg19 UCEC TCGA-EO-A3KU-01A 8 18 Out-of-frame Inter-chr p11.22 p15.4 Seq+ 54501 ChimerSeq STARFusion TCGA_RNA-Seq PIGR-STAG2 PIGR chr1 207101875 - STAG2 chrX 123094447 + Exonic hg19 UCEC TCGA-AX-A1CI-01A 4 0 Out-of-frame Inter-chr q32.1 q25 Oncogene 54502 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB7C-DYM ZBTB7C chr18 45864545 - DYM chr18 46570574 - Exonic hg19 UCEC TCGA-AX-A2H8-01A 5 0 5'UTR-CDS Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 54503 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-HSP90AA1 MYH9 chr22 36783852 - HSP90AA1 chr14 102550901 - Exonic hg19 UCEC TCGA-D1-A3DG-01A 27 155 5'UTR-CDS Inter-chr q12.3 Oncogene Tumor suppressor gene q32.31 Oncogene Seq+ 54504 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-QTRT1 DNM2 chr19 10829079 + QTRT1 chr19 10812626 + Exonic hg19 UCEC TCGA-D1-A3DG-01A 16 149 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 54505 ChimerSeq STARFusion TCGA_RNA-Seq TRAF3IP2-FYN TRAF3IP2 chr6 111887647 - FYN chr6 111995833 - Exonic hg19 UCEC TCGA-D1-A3DG-01A 11 66 Out-of-frame Intra-chr q21 q21 TK:Src Seq+ 54506 ChimerSeq STARFusion TCGA_RNA-Seq CLIP2-NCF1C CLIP2 chr7 73778645 + NCF1C chr7 74582682 - Exonic hg19 UCEC TCGA-D1-A3DG-01A 10 69 CDS-3'UTR Intra-chr q11.23 q11.23 54507 ChimerSeq STARFusion TCGA_RNA-Seq JUP-LEPREL4 JUP chr17 39914651 - LEPREL4 chr17 39967536 - Exonic hg19 UCEC TCGA-D1-A3DG-01A 7 69 In-Frame Intra-chr q21.2 Tumor suppressor gene 54508 ChimerSeq STARFusion TCGA_RNA-Seq CLIP2-NCF1C CLIP2 chr7 73787366 + NCF1C chr7 74582682 - Exonic hg19 UCEC TCGA-D1-A3DG-01A 3 69 CDS-3'UTR Intra-chr q11.23 q11.23 54509 ChimerSeq STARFusion TCGA_RNA-Seq JUP-LEPREL4 JUP chr17 39914651 - LEPREL4 chr17 39963131 - Exonic hg19 UCEC TCGA-D1-A3DG-01A 3 69 In-Frame Intra-chr q21.2 Tumor suppressor gene 54510 ChimerSeq STARFusion TCGA_RNA-Seq XPR1-LHX4 XPR1 chr1 180805852 + LHX4 chr1 180217420 + Exonic hg19 UCEC TCGA-D1-A3DG-01A 7 29 In-Frame Intra-chr q25.3 q25.2 Tumor suppressor gene Transcription factor Seq+ 54511 ChimerSeq STARFusion TCGA_RNA-Seq TMEM120B-ORAI1 TMEM120B chr12 122199644 + ORAI1 chr12 122078947 + Exonic hg19 UCEC TCGA-D1-A3DG-01A 9 16 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 54512 ChimerSeq STARFusion TCGA_RNA-Seq STIM1-CLIP1 STIM1 chr11 3877639 + CLIP1 chr12 122773088 - Exonic hg19 UCEC TCGA-D1-A3DG-01A 5 12 Out-of-frame Inter-chr p15.4 q24.31 Seq+ 54513 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D2B-ACSBG1 TBC1D2B chr15 78295647 - ACSBG1 chr15 78472122 - Exonic hg19 UCEC TCGA-D1-A3DG-01A 3 13 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 54514 ChimerSeq STARFusion TCGA_RNA-Seq SMU1-FAM219A SMU1 chr9 33053121 - FAM219A chr9 34405962 - Exonic hg19 UCEC TCGA-D1-A3DG-01A 2 16 In-Frame Intra-chr p21.1 p13.3 Seq+ 54515 ChimerSeq STARFusion TCGA_RNA-Seq TMEM234-RUSC1 TMEM234 chr1 32681795 - RUSC1 chr1 155295107 + Exonic hg19 UCEC TCGA-D1-A3DG-01A 3 10 3'UTR-CDS Intra-chr p35.2 q22 Seq+ 54516 ChimerSeq STARFusion TCGA_RNA-Seq NUP98-MLXIP NUP98 chr11 3789811 - MLXIP chr12 122611803 + Exonic hg19 UCEC TCGA-D1-A3DG-01A 2 4 Out-of-frame Inter-chr p15.4 Oncogene Tumor suppressor gene Transcription factor Seq+ 54517 ChimerSeq STARFusion TCGA_RNA-Seq CELSR1-KCNJ4 CELSR1 chr22 46787083 - KCNJ4 chr22 38824176 - Exonic hg19 UCEC TCGA-D1-A162-01A 13 0 CDS-5'UTR Intra-chr q13.31 q13.1 Seq+ 54518 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-ACVRL1 PTPN12 chr7 77166962 + ACVRL1 chr12 52306254 + Exonic hg19 UCEC TCGA-D1-A162-01A 8 0 CDS-5'UTR Inter-chr q11.23 Tumor suppressor gene q13.13 Oncogene Seq+ 54519 ChimerSeq STARFusion TCGA_RNA-Seq CTTN-ANO1 CTTN chr11 70275305 + ANO1 chr11 69970456 + Exonic hg19 UCEC TCGA-D1-A162-01A 6 0 In-Frame Intra-chr q13.3 q13.3 Seq+ 54520 ChimerSeq STARFusion TCGA_RNA-Seq CENPT-RPL14 CENPT chr16 67876840 - RPL14 chr3 40503553 + Exonic hg19 UCEC TCGA-D1-A162-01A 3 0 Out-of-frame Inter-chr q22.1 Transcription factor p22.1 54521 ChimerSeq STARFusion TCGA_RNA-Seq GTF2IRD2-LAMB1 GTF2IRD2 chr7 74239462 - LAMB1 chr7 107580803 - Exonic hg19 UCEC TCGA-D1-A162-01A 3 0 In-Frame Intra-chr q11.23 Transcription factor q31.1 54522 ChimerSeq STARFusion TCGA_RNA-Seq GALK2-FGF7 GALK2 chr15 49620327 + FGF7 chr15 49775348 + Exonic hg19 UCEC TCGA-B5-A0K9-01A 2 1 Out-of-frame Intra-chr q21.1 q21.2 54523 ChimerSeq STARFusion TCGA_RNA-Seq DLG3-UNC5D DLG3 chrX 69699114 + UNC5D chr8 35606045 + Exonic hg19 UCEC TCGA-BK-A139-01C 4 1 In-Frame Inter-chr q13.1 p12 Tumor suppressor gene Seq+ 54524 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-DHRSX IGH@ chr14 106330428 - DHRSX chrX 2184847 - Exonic hg19 UCEC TCGA-B5-A11N-01A 19 0 Out-of-frame Inter-chr 32.33 p22.33 54525 ChimerSeq STARFusion TCGA_RNA-Seq IGHJ4-DHRSX IGHJ4 chr14 106330428 - DHRSX chrX 2184847 - Exonic hg19 UCEC TCGA-B5-A11N-01A 19 0 Out-of-frame Inter-chr p22.33 54526 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106209411 - Exonic hg19 UCEC TCGA-B5-A11N-01A 4 0 Out-of-frame Inter-chr q21.2 32.33 54527 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076851 + IGHG1 chr14 106209411 - Exonic hg19 UCEC TCGA-B5-A11N-01A 4 0 Out-of-frame Inter-chr q21.2 q32.33 54528 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-TYRO3 IGKC chr2 89156966 - TYRO3 chr15 41854865 + Exonic hg19 UCEC TCGA-B5-A11N-01A 4 0 Out-of-frame Inter-chr p11.2 q15.1 TK:Axl 54529 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868873 - SLC44A4 chr6 31831427 - Exonic hg19 UCEC TCGA-B5-A11N-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 54530 ChimerSeq STARFusion TCGA_RNA-Seq GGNBP2-NR1D1 GGNBP2 chr17 34941880 + NR1D1 chr17 38256519 - Exonic hg19 UCEC TCGA-BK-A26L-01A 7 11 CDS-5'UTR Intra-chr Tumor suppressor gene q21.1 Transcription factor Seq+ 54531 ChimerSeq STARFusion TCGA_RNA-Seq FOXJ3-TUFT1 FOXJ3 chr1 42744019 - TUFT1 chr1 151535061 + Exonic hg19 UCEC TCGA-BK-A26L-01A 2 11 In-Frame Intra-chr p34.2 Transcription factor q21.3 Seq+ 54532 ChimerSeq STARFusion TCGA_RNA-Seq SRPK1-PXT1 SRPK1 chr6 35806114 - PXT1 chr6 36359651 - Exonic hg19 UCEC TCGA-BK-A26L-01A 2 5 Out-of-frame Intra-chr p21.31 CMGC:SRPK p21.31 Seq+ 54533 ChimerSeq STARFusion TCGA_RNA-Seq HIRIP3-INO80E HIRIP3 chr16 30006424 - INO80E chr16 30012079 + Exonic hg19 UCEC TCGA-D1-A1NW-01A 46 0 In-Frame Intra-chr p11.2 p11.2 Seq+ 54534 ChimerSeq STARFusion TCGA_RNA-Seq NPIPB3-CRYM NPIPB3 chr16 21436300 - CRYM chr16 21255389 - Exonic hg19 UCEC TCGA-D1-A1NW-01A 9 0 Out-of-frame Intra-chr p12.2 54535 ChimerSeq STARFusion TCGA_RNA-Seq RGP1-LCN6 RGP1 chr9 35756858 + LCN6 chr9 139642015 - Exonic hg19 UCEC TCGA-D1-A1NW-01A 6 0 3'UTR-CDS Intra-chr p13.3 q34.3 54536 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-CYB5B NFAT5 chr16 69660431 + CYB5B chr16 69492996 + Exonic hg19 UCEC TCGA-D1-A1NW-01A 4 0 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 54537 ChimerSeq STARFusion TCGA_RNA-Seq RGP1-LCN6 RGP1 chr9 35757194 + LCN6 chr9 139642015 - Exonic hg19 UCEC TCGA-D1-A1NW-01A 4 0 3'UTR-CDS Intra-chr p13.3 q34.3 54538 ChimerSeq STARFusion TCGA_RNA-Seq LRRC14-UPK1B LRRC14 chr8 145750134 + UPK1B chr3 118905565 + Exonic hg19 UCEC TCGA-BK-A6W3 84 0 Out-of-frame Inter-chr q24.3 q13.32 Seq+ 54539 ChimerSeq STARFusion TCGA_RNA-Seq SPOP-NDUFS5 SPOP chr17 47755295 - NDUFS5 chr1 39494395 + Exonic hg19 UCEC TCGA-EY-A4KR-01A 70 153 5'UTR-5'UTR Inter-chr q21.33 Oncogene Tumor suppressor gene p34.3 Seq+ 54540 ChimerSeq STARFusion TCGA_RNA-Seq ARID1B-EZR ARID1B chr6 157256710 + EZR chr6 159210403 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 29 92 In-Frame Intra-chr q25.3 Oncogene q25.3 Seq+ 54541 ChimerSeq STARFusion TCGA_RNA-Seq DOCK1-DACT3 DOCK1 chr10 128860040 + DACT3 chr19 47156332 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 16 115 In-Frame Inter-chr q26.2 q13.32 Seq+ 54542 ChimerSeq STARFusion TCGA_RNA-Seq SCRN2-CBX1 SCRN2 chr17 45918036 - CBX1 chr17 46152462 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 10 123 In-Frame Intra-chr q21.32 q21.32 Seq+ 54543 ChimerSeq STARFusion TCGA_RNA-Seq RNF213-AKAP8L RNF213 chr17 78332279 + AKAP8L chr19 15521405 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 19 85 Out-of-frame Inter-chr q25.3 Oncogene p13.12 Transcription factor Seq+ 54544 ChimerSeq STARFusion TCGA_RNA-Seq SCRN2-CBX1 SCRN2 chr17 45918574 - CBX1 chr17 46152462 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 4 123 5'UTR-CDS Intra-chr q21.32 q21.32 Seq+ 54545 ChimerSeq STARFusion TCGA_RNA-Seq GLYR1-C16orf89 GLYR1 chr16 4861171 - C16orf89 chr16 5097965 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 10 97 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 54546 ChimerSeq STARFusion TCGA_RNA-Seq RFX3-PLGRKT RFX3 chr9 3395472 - PLGRKT chr9 5361888 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 15 57 In-Frame Intra-chr p24.2 Transcription factor p24.1 Seq+ 54547 ChimerSeq STARFusion TCGA_RNA-Seq OLFM2-EXOSC10 OLFM2 chr19 10046980 - EXOSC10 chr1 11137708 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 9 26 In-Frame Inter-chr p13.2 p36.22 Seq+ 54548 ChimerSeq STARFusion TCGA_RNA-Seq VMP1-BCAS3 VMP1 chr17 57842499 + BCAS3 chr17 59001768 + Exonic hg19 UCEC TCGA-EY-A4KR-01A 8 16 In-Frame Intra-chr q23.1 q23.2 Seq+ 54549 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC11-KCNN4 TRAPPC11 chr4 184589270 + KCNN4 chr19 44276287 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 7 16 In-Frame Inter-chr q35.1 q13.31 Seq+ 54550 ChimerSeq STARFusion TCGA_RNA-Seq SMURF2P1-GOSR1 SMURF2P1 chr17 28937960 + GOSR1 chr17 28837898 + Exonic hg19 UCEC TCGA-EY-A4KR-01A 5 20 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 54551 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD27-PEPD ANKRD27 chr19 33118989 - PEPD chr19 33902655 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 6 11 Out-of-frame Intra-chr q13.11 q13.11 Seq+ 54552 ChimerSeq STARFusion TCGA_RNA-Seq ITGB8-ATM ITGB8 chr7 20403345 + ATM chr11 108137898 + Exonic hg19 UCEC TCGA-EY-A4KR-01A 6 1 In-Frame Inter-chr p21.1 q22.3 Atypical:PIKK Oncogene Tumor suppressor gene Seq+ 54553 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125699 - CXCL16 chr17 4637313 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 5 3 Out-of-frame Inter-chr q12.2 p13.2 54554 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-SNTB2 NFAT5 chr16 69600277 + SNTB2 chr16 69279505 + Exonic hg19 UCEC TCGA-EY-A4KR-01A 3 6 In-Frame Intra-chr q22.1 Transcription factor Seq+ 54555 ChimerSeq STARFusion TCGA_RNA-Seq PABPC1-ZNF706 PABPC1 chr8 101716525 - ZNF706 chr8 102190615 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 2 9 3'UTR-3'UTR Intra-chr q22.3 q22.3 Transcription factor Seq+ 54556 ChimerSeq STARFusion TCGA_RNA-Seq VIPAS39-ISM2 VIPAS39 chr14 77910592 - ISM2 chr14 77951262 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 3 4 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 54557 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125718 - CXCL16 chr17 4637332 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 3 3 Out-of-frame Inter-chr q12.2 p13.2 54558 ChimerSeq STARFusion TCGA_RNA-Seq CSAD-ATXN2 CSAD chr12 53564207 - ATXN2 chr12 111926584 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 3 2 Out-of-frame Intra-chr q13.13 q24.12 54559 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-CCDC170 ESR1 chr6 152163922 + CCDC170 chr6 151894309 + Exonic hg19 UCEC TCGA-EY-A4KR-01A 2 1 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 KB Pub Seq+ 54560 ChimerSeq STARFusion TCGA_RNA-Seq MACF1-SLC35B1 MACF1 chr1 39715775 + SLC35B1 chr17 47778872 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 2 1 Out-of-frame Inter-chr p34.3 q21.33 54561 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-TYRO3 IGKC chr2 89156966 - TYRO3 chr15 41854865 + Exonic hg19 UCEC TCGA-AX-A0IZ-01A 4 0 Out-of-frame Inter-chr p11.2 q15.1 TK:Axl 54562 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC10-RPL31P50 DNAJC10 chr2 183653145 + RPL31P50 chr12 31750085 - Exonic hg19 UCEC TCGA-BK-A13C-01A 3 0 Out-of-frame Inter-chr q32.1 p11.21 54563 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL671P-HCG4P7 RN7SL671P chr4 1870886 - HCG4P7 chr6 29855588 - Exonic hg19 UCEC TCGA-BK-A13C-01A 3 0 Out-of-frame Inter-chr 54564 ChimerSeq STARFusion TCGA_RNA-Seq GATAD2A-UBA52 GATAD2A chr19 19576423 + UBA52 chr19 18684472 + Exonic hg19 UCEC TCGA-AX-A06B-01A 11 0 Out-of-frame Intra-chr p13.11 Transcription factor p13.11 54565 ChimerSeq STARFusion TCGA_RNA-Seq PXK-TTC7A PXK chr3 58355205 + TTC7A chr2 47300841 + Exonic hg19 UCEC TCGA-AX-A06B-01A 4 0 In-Frame Inter-chr p14.3 p21 54566 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D22A-PRPH TBC1D22A chr22 47193517 + PRPH chr12 49687507 + Exonic hg19 UCEC TCGA-D1-A1NX-01A 9 0 CDS-5'UTR Inter-chr q13.31 q13.12 54567 ChimerSeq STARFusion TCGA_RNA-Seq COL14A1-DEPTOR COL14A1 chr8 121174808 + DEPTOR chr8 121061815 + Exonic hg19 UCEC TCGA-D1-A1NX-01A 4 0 Out-of-frame Intra-chr q24.12 q24.12 Seq+ 54568 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-SLC45A4 PTK2 chr8 141874411 - SLC45A4 chr8 142264728 - Exonic hg19 UCEC TCGA-D1-A1NX-01A 4 0 CDS-5'UTR Intra-chr q24.3 q24.3 Seq+ 54569 ChimerSeq STARFusion TCGA_RNA-Seq TSR1-MRPL20 TSR1 chr17 2232637 - MRPL20 chr1 1337636 - Exonic hg19 UCEC TCGA-QF-A5YS-01A 2 1 Out-of-frame Inter-chr p13.3 p36.33 54570 ChimerSeq STARFusion TCGA_RNA-Seq DAAM1-IGH@ DAAM1 chr14 59836341 + IGH@ chr14 106330468 - Exonic hg19 UCEC TCGA-FI-A2CX-01A 8 0 Out-of-frame Intra-chr q23.1 32.33 54571 ChimerSeq STARFusion TCGA_RNA-Seq DAAM1-IGHJ4 DAAM1 chr14 59836341 + IGHJ4 chr14 106330468 - Exonic hg19 UCEC TCGA-FI-A2CX-01A 8 0 Out-of-frame Intra-chr q23.1 54572 ChimerSeq STARFusion TCGA_RNA-Seq PLEC-IGH@ PLEC chr8 144992500 - IGH@ chr14 106330466 - Exonic hg19 UCEC TCGA-FI-A2CX-01A 8 0 Out-of-frame Inter-chr q24.3 32.33 54573 ChimerSeq STARFusion TCGA_RNA-Seq PLEC-IGHJ4 PLEC chr8 144992500 - IGHJ4 chr14 106330466 - Exonic hg19 UCEC TCGA-FI-A2CX-01A 8 0 Out-of-frame Inter-chr q24.3 54574 ChimerSeq STARFusion TCGA_RNA-Seq FNDC3B-PIK3CA FNDC3B chr3 171851336 + PIK3CA chr3 178916538 + Exonic hg19 UCEC TCGA-BK-A56F-01A 14 14 CDS-5'UTR Intra-chr q26.31 q26.32 Oncogene Seq+ 54575 ChimerSeq STARFusion TCGA_RNA-Seq GPR141-NME8 GPR141 chr7 37725186 + NME8 chr7 37896876 + Exonic hg19 UCEC TCGA-BK-A56F-01A 2 1 Out-of-frame Intra-chr p14.1 p14.1 54576 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1522-RBBP4 KIAA1522 chr1 33237302 + RBBP4 chr1 33149610 + Exonic hg19 UCEC TCGA-D1-A2G7-01A 30 0 Out-of-frame Intra-chr p35.1 p35.1 Seq+ 54577 ChimerSeq STARFusion TCGA_RNA-Seq SEMA6C-THEM4 SEMA6C chr1 151111901 - THEM4 chr1 151867670 - Exonic hg19 UCEC TCGA-D1-A2G7-01A 5 0 In-Frame Intra-chr q21.3 q21.3 Seq+ 54578 ChimerSeq STARFusion TCGA_RNA-Seq BPTF-NOL11 BPTF chr17 65822453 + NOL11 chr17 65730479 + Exonic hg19 UCEC TCGA-D1-A2G7-01A 4 0 In-Frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 54579 ChimerSeq STARFusion TCGA_RNA-Seq LIMS3L-BUB1 LIMS3L chr2 111181238 - BUB1 chr2 111399811 - Exonic hg19 UCEC TCGA-D1-A2G7-01A 4 0 3'UTR-CDS Intra-chr q13 Other:BUB 54580 ChimerSeq STARFusion TCGA_RNA-Seq TRIM2-ARFIP1 TRIM2 chr4 154073764 + ARFIP1 chr4 153831216 + Exonic hg19 UCEC TCGA-D1-A2G7-01A 4 0 5'UTR-CDS Intra-chr q31.3 q31.3 Seq+ 54581 ChimerSeq STARFusion TCGA_RNA-Seq CCDC157-GJB1 CCDC157 chr22 30762237 + GJB1 chrX 70443542 + Exonic hg19 UCEC TCGA-D1-A179-01A 14 0 CDS-5'UTR Inter-chr q12.2 q13.1 54582 ChimerSeq STARFusion TCGA_RNA-Seq DPF2-POLA2 DPF2 chr11 65116402 + POLA2 chr11 65055187 + Exonic hg19 UCEC TCGA-D1-A179-01A 11 0 In-Frame Intra-chr q13.1 q13.1 Seq+ 54583 ChimerSeq STARFusion TCGA_RNA-Seq ABCA3-TCEB2 ABCA3 chr16 2390574 - TCEB2 chr16 2825557 - Exonic hg19 UCEC TCGA-D1-A179-01A 8 0 3'UTR-CDS Intra-chr p13.3 Seq+ 54584 ChimerSeq STARFusion TCGA_RNA-Seq CBFA2T2-BPIFB1 CBFA2T2 chr20 32078107 + BPIFB1 chr20 31873839 + Exonic hg19 UCEC TCGA-D1-A179-01A 8 0 CDS-5'UTR Intra-chr q11.21 q11.21 Seq+ 54585 ChimerSeq STARFusion TCGA_RNA-Seq LRIG1-SLC25A26 LRIG1 chr3 66550614 - SLC25A26 chr3 66419902 + Exonic hg19 UCEC TCGA-D1-A179-01A 8 0 Out-of-frame Intra-chr Tumor suppressor gene Seq+ 54586 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0100-MYO18A KIAA0100 chr17 26945809 - MYO18A chr17 27449271 - Exonic hg19 UCEC TCGA-D1-A179-01A 6 0 In-Frame Intra-chr q11.2 q11.2 Oncogene Seq+ 54587 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A14-RPL30 SLC39A14 chr8 22262493 + RPL30 chr8 99058032 - Exonic hg19 UCEC TCGA-D1-A179-01A 6 0 CDS-5'UTR Intra-chr p21.3 q22.2 54588 ChimerSeq STARFusion TCGA_RNA-Seq TRHDE-LGR5 TRHDE chr12 72680734 + LGR5 chr12 71918186 + Exonic hg19 UCEC TCGA-D1-A179-01A 5 0 Out-of-frame Intra-chr q21.1 q21.1 54589 ChimerSeq STARFusion TCGA_RNA-Seq C4A-C2 C4A chr6 31970274 + C2 chr6 31868873 + Exonic hg19 UCEC TCGA-D1-A179-01A 4 0 Out-of-frame Intra-chr p21.33 54590 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 UCEC TCGA-D1-A177-01A 3 0 Out-of-frame Inter-chr p22.1 54591 ChimerSeq STARFusion TCGA_RNA-Seq EDF1-FAM159B EDF1 chr9 139757358 - FAM159B chr5 63986324 + Exonic hg19 UCEC TCGA-D1-A177-01A 3 0 CDS-5'UTR Inter-chr q34.3 q12.3 54592 ChimerSeq STARFusion TCGA_RNA-Seq GAPDH-PDE6A GAPDH chr12 6646176 + PDE6A chr5 149246803 - Exonic hg19 UCEC TCGA-D1-A177-01A 3 0 Out-of-frame Inter-chr p13.31 q32 54593 ChimerSeq STARFusion TCGA_RNA-Seq KNDC1-CRIP1 KNDC1 chr10 134996878 + CRIP1 chr14 105954667 + Exonic hg19 UCEC TCGA-D1-A177-01A 3 0 Out-of-frame Inter-chr q26.3 q32.33 54594 ChimerSeq STARFusion TCGA_RNA-Seq C19orf10-CD37 C19orf10 chr19 4668607 - CD37 chr19 49838971 + Exonic hg19 UCEC TCGA-A5-A0R7-01A 4 0 In-Frame Intra-chr q13.33 Seq+ 54595 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125718 - CXCL16 chr17 4637332 - Exonic hg19 UCEC TCGA-EO-A3AU-01A 3 8 Out-of-frame Inter-chr q12.2 p13.2 54596 ChimerSeq STARFusion TCGA_RNA-Seq HSPG2-MATN2 HSPG2 chr1 22165864 - MATN2 chr8 98991114 + Exonic hg19 UCEC TCGA-FI-A3PV-01A 24 102 In-Frame Inter-chr p36.12 q22.1 Seq+ 54597 ChimerSeq STARFusion TCGA_RNA-Seq JUP-LEPREL4 JUP chr17 39942840 - LEPREL4 chr17 39963131 - Exonic hg19 UCEC TCGA-FI-A3PV-01A 14 112 5'UTR-CDS Intra-chr q21.2 Tumor suppressor gene 54598 ChimerSeq STARFusion TCGA_RNA-Seq JUP-LEPREL4 JUP chr17 39942818 - LEPREL4 chr17 39966086 - Exonic hg19 UCEC TCGA-FI-A3PV-01A 3 112 5'UTR-CDS Intra-chr q21.2 Tumor suppressor gene 54599 ChimerSeq STARFusion TCGA_RNA-Seq JUP-LEPREL4 JUP chr17 39942155 - LEPREL4 chr17 39966086 - Exonic hg19 UCEC TCGA-FI-A3PV-01A 3 112 5'UTR-CDS Intra-chr q21.2 Tumor suppressor gene 54600 ChimerSeq STARFusion TCGA_RNA-Seq JUP-LEPREL4 JUP chr17 39942840 - LEPREL4 chr17 39966086 - Exonic hg19 UCEC TCGA-FI-A3PV-01A 3 112 5'UTR-CDS Intra-chr q21.2 Tumor suppressor gene 54601 ChimerSeq STARFusion TCGA_RNA-Seq RNF213-NVL RNF213 chr17 78337114 + NVL chr1 224482113 - Exonic hg19 UCEC TCGA-FI-A3PV-01A 7 87 Out-of-frame Inter-chr q25.3 Oncogene q42.11 Seq+ 54602 ChimerSeq STARFusion TCGA_RNA-Seq KIRREL-SNUPN KIRREL chr1 158046052 + SNUPN chr15 75918712 - Exonic hg19 UCEC TCGA-FI-A3PV-01A 10 28 CDS-5'UTR Inter-chr q23.1 q24.2 Seq+ 54603 ChimerSeq STARFusion TCGA_RNA-Seq WDR20-PPP2R5C WDR20 chr14 102661457 + PPP2R5C chr14 102323023 + Exonic hg19 UCEC TCGA-FI-A3PV-01A 5 45 Out-of-frame Intra-chr q32.31 q32.31 Tumor suppressor gene Seq+ 54604 ChimerSeq STARFusion TCGA_RNA-Seq WDR20-PPP2R5C WDR20 chr14 102606509 + PPP2R5C chr14 102323023 + Exonic hg19 UCEC TCGA-FI-A3PV-01A 3 45 Out-of-frame Intra-chr q32.31 q32.31 Tumor suppressor gene Seq+ 54605 ChimerSeq STARFusion TCGA_RNA-Seq WDR20-PPP2R5C WDR20 chr14 102661457 + PPP2R5C chr14 102302506 + Exonic hg19 UCEC TCGA-FI-A3PV-01A 2 45 5'UTR-CDS Intra-chr q32.31 q32.31 Tumor suppressor gene Seq+ 54606 ChimerSeq STARFusion TCGA_RNA-Seq MAN1A2-PTGFRN MAN1A2 chr1 117984947 + PTGFRN chr1 117529423 + Exonic hg19 UCEC TCGA-FI-A3PV-01A 3 16 Out-of-frame Intra-chr p12 p13.1 Seq+ 54607 ChimerSeq STARFusion TCGA_RNA-Seq BCOR-PHEX BCOR chrX 40036260 - PHEX chrX 22231021 + Exonic hg19 UCEC TCGA-FI-A3PV-01A 2 15 5'UTR-CDS Intra-chr p11.4 Oncogene p22.11 Seq+ 54608 ChimerSeq STARFusion TCGA_RNA-Seq MIB2-ACVR1B MIB2 chr1 1559325 + ACVR1B chr12 52369049 + Exonic hg19 UCEC TCGA-FI-A3PV-01A 4 7 Out-of-frame Inter-chr p36.33 q13.13 Oncogene Seq+ 54609 ChimerSeq STARFusion TCGA_RNA-Seq PHYHIPL-LINC00844 PHYHIPL chr10 60994260 + LINC00844 chr10 60760989 + Exonic hg19 UCEC TCGA-FI-A3PV-01A 3 10 Out-of-frame Intra-chr q21.1 q21.1 54610 ChimerSeq STARFusion TCGA_RNA-Seq GLYR1-PDE4D GLYR1 chr16 4854938 - PDE4D chr5 58511414 - Exonic hg19 UCEC TCGA-B5-A1MV-01A 5 0 Out-of-frame Inter-chr p13.3 Transcription factor q12.1 54611 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-GLTPD1 PVT1 chr8 128806980 + GLTPD1 chr1 1262216 + Exonic hg19 UCEC TCGA-D1-A16G-01A 30 0 5'UTR-5'UTR Inter-chr q24.21 Seq+ 54612 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-GLTPD1 PVT1 chr8 128806980 + GLTPD1 chr1 1262621 + Exonic hg19 UCEC TCGA-D1-A16G-01A 20 0 5'UTR-CDS Inter-chr q24.21 Seq+ 54613 ChimerSeq STARFusion TCGA_RNA-Seq ELMSAN1-FAM161B ELMSAN1 chr14 74203701 - FAM161B chr14 74413308 - Exonic hg19 UCEC TCGA-D1-A16G-01A 7 0 Out-of-frame Intra-chr q24.3 q24.3 54614 ChimerSeq STARFusion TCGA_RNA-Seq FAM102A-PTGES2 FAM102A chr9 130742271 - PTGES2 chr9 130887720 - Exonic hg19 UCEC TCGA-D1-A16G-01A 7 0 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 54615 ChimerSeq STARFusion TCGA_RNA-Seq ABCC3-CD74 ABCC3 chr17 48762107 + CD74 chr5 149786531 - Exonic hg19 UCEC TCGA-D1-A16G-01A 6 0 Out-of-frame Inter-chr q21.33 q33.1 54616 ChimerSeq STARFusion TCGA_RNA-Seq ODF2-SLC27A4 ODF2 chr9 131236020 + SLC27A4 chr9 131122613 + Exonic hg19 UCEC TCGA-D1-A16G-01A 6 0 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 54617 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-GLTPD1 PVT1 chr8 128808317 + GLTPD1 chr1 1262216 + Exonic hg19 UCEC TCGA-D1-A16G-01A 6 0 5'UTR-5'UTR Inter-chr q24.21 Seq+ 54618 ChimerSeq STARFusion TCGA_RNA-Seq CERK-CCNL2 CERK chr22 47087469 - CCNL2 chr1 1330894 - Exonic hg19 UCEC TCGA-D1-A16G-01A 5 0 Out-of-frame Inter-chr q13.31 p36.33 54619 ChimerSeq STARFusion TCGA_RNA-Seq MYO9A-PKM MYO9A chr15 72410021 - PKM chr15 72511451 - Exonic hg19 UCEC TCGA-D1-A16G-01A 4 0 Out-of-frame Intra-chr q23 q23 54620 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-GLTPD1 PVT1 chr8 128867565 + GLTPD1 chr1 1262216 + Exonic hg19 UCEC TCGA-D1-A16G-01A 4 0 5'UTR-5'UTR Inter-chr q24.21 Seq+ 54621 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL671P-HCG4P7 RN7SL671P chr4 1870886 - HCG4P7 chr6 29855588 - Exonic hg19 UCEC TCGA-D1-A16G-01A 4 0 Out-of-frame Inter-chr 54622 ChimerSeq STARFusion TCGA_RNA-Seq EDF1-FAM159B EDF1 chr9 139757358 - FAM159B chr5 63986324 + Exonic hg19 UCEC TCGA-A5-A0GI-01A 5 0 CDS-5'UTR Inter-chr q34.3 q12.3 54623 ChimerSeq STARFusion TCGA_RNA-Seq GAPDH-PDE6A GAPDH chr12 6646176 + PDE6A chr5 149246803 - Exonic hg19 UCEC TCGA-A5-A0GI-01A 4 0 Out-of-frame Inter-chr p13.31 q32 54624 ChimerSeq STARFusion TCGA_RNA-Seq MAML3-GTSF1 MAML3 chr4 141074014 - GTSF1 chr12 54857081 - Exonic hg19 UCEC TCGA-AX-A3FW-01A 11 39 In-Frame Inter-chr q31.1 q13.13 Seq+ 54625 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61665880 - ANK3 chr10 61842495 - Exonic hg19 UCEC TCGA-AX-A3FW-01A 7 8 In-Frame Intra-chr q21.2 q21.2 Seq+ 54626 ChimerSeq STARFusion TCGA_RNA-Seq GIGYF2-SP2 GIGYF2 chr2 233671367 + SP2 chr17 45992678 + Exonic hg19 UCEC TCGA-AX-A3FW-01A 5 6 Out-of-frame Inter-chr q37.1 q21.32 Transcription factor Seq+ 54627 ChimerSeq STARFusion TCGA_RNA-Seq PHF21B-WNT7B PHF21B chr22 45404426 - WNT7B chr22 46327249 - Exonic hg19 UCEC TCGA-AX-A3FW-01A 5 5 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 54628 ChimerSeq STARFusion TCGA_RNA-Seq C1orf159-SDF4 C1orf159 chr1 1051440 - SDF4 chr1 1159348 - Exonic hg19 UCEC TCGA-AX-A3FW-01A 3 10 5'UTR-CDS Intra-chr p36.33 p36.33 Seq+ 54629 ChimerSeq STARFusion TCGA_RNA-Seq SOS1-DTL SOS1 chr2 39249711 - DTL chr1 212251515 + Exonic hg19 UCEC TCGA-AX-A3FW-01A 2 8 Out-of-frame Inter-chr p22.1 q32.3 Seq+ 54630 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A5-KRT84 SLC39A5 chr12 56626656 + KRT84 chr12 52774367 - Exonic hg19 UCEC TCGA-AX-A3FW-01A 2 4 In-Frame Intra-chr q13.3 q13.13 Seq+ 54631 ChimerSeq STARFusion TCGA_RNA-Seq FAM208A-TADA3 FAM208A chr3 56694759 - TADA3 chr3 9833177 - Exonic hg19 UCEC TCGA-AX-A3FW-01A 2 3 CDS-5'UTR Intra-chr p14.3 p25.3 Seq+ 54632 ChimerSeq STARFusion TCGA_RNA-Seq ELF2-NDUFC1 ELF2 chr4 140037803 - NDUFC1 chr4 140217114 - Exonic hg19 UCEC TCGA-AX-A3FW-01A 2 2 5'UTR-5'UTR Intra-chr q31.1 Transcription factor q31.1 54633 ChimerSeq STARFusion TCGA_RNA-Seq NKD2-KIAA0947 NKD2 chr5 1009675 + KIAA0947 chr5 5454665 + Exonic hg19 UCEC TCGA-AX-A3FZ-01A 2 7 Out-of-frame Intra-chr Seq+ 54634 ChimerSeq STARFusion TCGA_RNA-Seq CAPNS1-FTH1 CAPNS1 chr19 36631928 + FTH1 chr11 61734922 - Exonic hg19 UCEC TCGA-D1-A17Q-01A 4 0 Out-of-frame Inter-chr q13.12 q12.3 54635 ChimerSeq STARFusion TCGA_RNA-Seq NFAT5-SNTB2 NFAT5 chr16 69600277 + SNTB2 chr16 69279505 + Exonic hg19 UCEC TCGA-B5-A0KB-01B 11 0 In-Frame Intra-chr q22.1 Transcription factor Seq+ 54636 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-HSPA1B ZBTB12 chr6 31868874 - HSPA1B chr6 31796503 + Exonic hg19 UCEC TCGA-B5-A0KB-01B 7 0 Out-of-frame Intra-chr p21.33 Transcription factor 54637 ChimerSeq STARFusion TCGA_RNA-Seq RLBP1-IFITM1 RLBP1 chr15 89754987 - IFITM1 chr11 314942 + Exonic hg19 UCEC TCGA-B5-A0KB-01B 6 0 Out-of-frame Inter-chr q26.1 p15.5 Oncogene 54638 ChimerSeq STARFusion TCGA_RNA-Seq RLBP1-IFITM2 RLBP1 chr15 89754987 - IFITM2 chr11 309033 + Exonic hg19 UCEC TCGA-B5-A0KB-01B 6 0 Out-of-frame Inter-chr q26.1 p15.5 54639 ChimerSeq STARFusion TCGA_RNA-Seq HEPHL1-PANX1 HEPHL1 chr11 93800909 + PANX1 chr11 93862494 + Exonic hg19 UCEC TCGA-B5-A0KB-01B 5 0 Out-of-frame Intra-chr q21 q21 54640 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD6-LTF ANKRD6 chr6 90272273 + LTF chr3 46477698 - Exonic hg19 UCEC TCGA-B5-A0KB-01B 4 0 Out-of-frame Inter-chr q15 p21.31 Oncogene Tumor suppressor gene Transcription factor 54641 ChimerSeq STARFusion TCGA_RNA-Seq HSPA5-C2 HSPA5 chr9 128001701 - C2 chr6 31868873 + Exonic hg19 UCEC TCGA-B5-A0KB-01B 4 0 Out-of-frame Inter-chr q33.3 p21.33 54642 ChimerSeq STARFusion TCGA_RNA-Seq KNDC1-CRIP1 KNDC1 chr10 134996878 + CRIP1 chr14 105954667 + Exonic hg19 UCEC TCGA-B5-A0KB-01B 4 0 Out-of-frame Inter-chr q26.3 q32.33 54643 ChimerSeq STARFusion TCGA_RNA-Seq PLCXD1-IGHG2 PLCXD1 chrX 209756 + IGHG2 chr14 106111129 - Exonic hg19 UCEC TCGA-D1-A16Q-01A 7 0 Out-of-frame Inter-chr p22.33 54644 ChimerSeq STARFusion TCGA_RNA-Seq APCDD1-IGKC APCDD1 chr18 10476779 + IGKC chr2 89160118 - Exonic hg19 UCEC TCGA-D1-A16Q-01A 4 0 Out-of-frame Inter-chr p11.22 p11.2 54645 ChimerSeq STARFusion TCGA_RNA-Seq APCDD1-IGKJ5 APCDD1 chr18 10476782 + IGKJ5 chr2 89160115 - Exonic hg19 UCEC TCGA-D1-A16Q-01A 4 0 Out-of-frame Inter-chr p11.22 p11.2 54646 ChimerSeq STARFusion TCGA_RNA-Seq EYA2-SLC2A10 EYA2 chr20 45523626 + SLC2A10 chr20 45353680 + Exonic hg19 UCEC TCGA-D1-A169-01A 8 0 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 54647 ChimerSeq STARFusion TCGA_RNA-Seq LRP5-CYB5R2 LRP5 chr11 68177608 + CYB5R2 chr11 7689044 - Exonic hg19 UCEC TCGA-D1-A169-01A 7 0 Out-of-frame Intra-chr q13.2 p15.4 Tumor suppressor gene 54648 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-DDX11L1 PPFIA1 chr11 70208594 + DDX11L1 chr1 12010 + Exonic hg19 UCEC TCGA-D1-A169-01A 7 0 CDS-3'UTR Inter-chr q13.3 p36.33 54649 ChimerSeq STARFusion TCGA_RNA-Seq FGF3-PPFIA1 FGF3 chr11 69631088 - PPFIA1 chr11 70178066 + Exonic hg19 UCEC TCGA-D1-A169-01A 5 0 In-Frame Intra-chr q13.3 q13.3 54650 ChimerSeq STARFusion TCGA_RNA-Seq RELA-MRGPRF RELA chr11 65430297 - MRGPRF chr11 68773729 - Exonic hg19 UCEC TCGA-D1-A169-01A 4 0 Out-of-frame Intra-chr q13.1 Transcription factor q13.3 54651 ChimerSeq STARFusion TCGA_RNA-Seq CASP8-VMP1 CASP8 chr2 202150040 + VMP1 chr17 57915656 + Exonic hg19 UCEC TCGA-EO-A3KW-01A 30 102 In-Frame Inter-chr q33.1 Oncogene Tumor suppressor gene q23.1 Seq+ 54652 ChimerSeq STARFusion TCGA_RNA-Seq CASP8-VMP1 CASP8 chr2 202151224 + VMP1 chr17 57915656 + Exonic hg19 UCEC TCGA-EO-A3KW-01A 5 102 Out-of-frame Inter-chr q33.1 Oncogene Tumor suppressor gene q23.1 Seq+ 54653 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-TRAPPC9 PTK2 chr8 141727697 - TRAPPC9 chr8 141034176 - Exonic hg19 UCEC TCGA-EO-A3KW-01A 7 69 In-Frame Intra-chr q24.3 q24.3 Seq+ 54654 ChimerSeq STARFusion TCGA_RNA-Seq BIRC6-MATN3 BIRC6 chr2 32641231 + MATN3 chr2 20206071 - Exonic hg19 UCEC TCGA-EO-A3KW-01A 11 41 In-Frame Intra-chr p22.3 p24.1 Seq+ 54655 ChimerSeq STARFusion TCGA_RNA-Seq TPST2-CRYBB1 TPST2 chr22 26986017 - CRYBB1 chr22 27012302 - Exonic hg19 UCEC TCGA-EO-A3KW-01A 9 29 5'UTR-5'UTR Intra-chr q12.1 q12.1 Seq+ 54656 ChimerSeq STARFusion TCGA_RNA-Seq CBX5-WDTC1 CBX5 chr12 54673792 - WDTC1 chr1 27608730 + Exonic hg19 UCEC TCGA-EO-A3KW-01A 7 29 5'UTR-CDS Inter-chr q13.13 Tumor suppressor gene p36.11 Seq+ 54657 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125718 - CXCL16 chr17 4637332 - Exonic hg19 UCEC TCGA-EO-A3KW-01A 8 24 Out-of-frame Inter-chr q12.2 p13.2 54658 ChimerSeq STARFusion TCGA_RNA-Seq TPST2-CRYBB1 TPST2 chr22 26986017 - CRYBB1 chr22 27008154 - Exonic hg19 UCEC TCGA-EO-A3KW-01A 5 29 5'UTR-CDS Intra-chr q12.1 q12.1 Seq+ 54659 ChimerSeq STARFusion TCGA_RNA-Seq MAL2-COLEC10 MAL2 chr8 120220844 + COLEC10 chr8 120101919 + Exonic hg19 UCEC TCGA-EO-A3KW-01A 6 21 Out-of-frame Intra-chr q24.12 q24.12 54660 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125699 - CXCL16 chr17 4637313 - Exonic hg19 UCEC TCGA-EO-A3KW-01A 5 24 Out-of-frame Inter-chr q12.2 p13.2 54661 ChimerSeq STARFusion TCGA_RNA-Seq AP2A2-DRD4 AP2A2 chr11 970311 + DRD4 chr11 640401 + Exonic hg19 UCEC TCGA-EO-A3KW-01A 6 14 Out-of-frame Intra-chr p15.5 p15.5 Seq+ 54662 ChimerSeq STARFusion TCGA_RNA-Seq NF1-YPEL5 NF1 chr17 29528503 + YPEL5 chr2 30379494 + Exonic hg19 UCEC TCGA-EO-A3KW-01A 3 21 CDS-5'UTR Inter-chr q11.2 Oncogene Tumor suppressor gene p23.1 Seq+ 54663 ChimerSeq STARFusion TCGA_RNA-Seq FAM168A-COA4 FAM168A chr11 73308968 - COA4 chr11 73584439 - Exonic hg19 UCEC TCGA-EO-A3KW-01A 4 14 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 54664 ChimerSeq STARFusion TCGA_RNA-Seq NPTN-ECI1 NPTN chr15 73925466 - ECI1 chr16 2301430 - Exonic hg19 UCEC TCGA-EO-A3KW-01A 5 10 In-Frame Inter-chr q24.1 p13.3 Seq+ 54665 ChimerSeq STARFusion TCGA_RNA-Seq CYB561D2-RBM6 CYB561D2 chr3 50388991 + RBM6 chr3 50085678 + Exonic hg19 UCEC TCGA-EO-A3KW-01A 5 5 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene Seq+ 54666 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-FAM168A FCHSD2 chr11 72851076 - FAM168A chr11 73131044 - Exonic hg19 UCEC TCGA-EO-A3KW-01A 3 11 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 54667 ChimerSeq STARFusion TCGA_RNA-Seq COPZ1-AHDC1 COPZ1 chr12 54718965 + AHDC1 chr1 27861427 - Exonic hg19 UCEC TCGA-EO-A3KW-01A 5 0 CDS-3'UTR Inter-chr q13.13 p35.3 Transcription factor Seq+ 54668 ChimerSeq STARFusion TCGA_RNA-Seq KMT2E-LHFPL3 KMT2E chr7 104722244 + LHFPL3 chr7 104546634 + Exonic hg19 UCEC TCGA-BG-A18C-01A 7 0 Out-of-frame Intra-chr q22.3 q22.2 54669 ChimerSeq STARFusion TCGA_RNA-Seq EEF1A1P10-PDE6A EEF1A1P10 chr7 144345219 - PDE6A chr5 149246793 - Exonic hg19 UCEC TCGA-D1-A17H-01A 9 0 Out-of-frame Inter-chr q35 q32 54670 ChimerSeq STARFusion TCGA_RNA-Seq MUC16-OR7D4 MUC16 chr19 9001831 - OR7D4 chr19 9325529 - Exonic hg19 UCEC TCGA-B5-A0K8-01A 20 0 CDS-5'UTR Intra-chr p13.2 p13.2 54671 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1E-DDX17 CSNK1E chr22 38710087 - DDX17 chr22 38882445 - Exonic hg19 UCEC TCGA-B5-A0K8-01A 14 0 In-Frame Intra-chr q13.1 q13.1 Seq+ 54672 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-MMP8 TMEM123 chr11 102319543 - MMP8 chr11 102595734 - Exonic hg19 UCEC TCGA-B5-A0K8-01A 7 0 CDS-5'UTR Intra-chr q22.2 q22.2 54673 ChimerSeq STARFusion TCGA_RNA-Seq FBXL19-C16orf71 FBXL19 chr16 30939284 + C16orf71 chr16 4790154 + Exonic hg19 UCEC TCGA-B5-A0K8-01A 4 0 In-Frame Intra-chr p11.2 Transcription factor p13.3 54674 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L2-PSMD1 DIS3L2 chr2 232826475 + PSMD1 chr2 232010954 + Exonic hg19 UCEC TCGA-AP-A05J-01A 10 0 5'UTR-5'UTR Intra-chr q37.1 q37.1 Seq+ 54675 ChimerSeq STARFusion TCGA_RNA-Seq HEPHL1-PANX1 HEPHL1 chr11 93800911 + PANX1 chr11 93862496 + Exonic hg19 UCEC TCGA-AP-A05J-01A 5 0 Out-of-frame Intra-chr q21 q21 54676 ChimerSeq STARFusion TCGA_RNA-Seq KIF3B-HCK KIF3B chr20 30915464 + HCK chr20 30659465 + Exonic hg19 UCEC TCGA-AP-A05J-01A 5 0 Out-of-frame Intra-chr q11.21 q11.21 TK:Src 54677 ChimerSeq STARFusion TCGA_RNA-Seq RPL12-FAM159B RPL12 chr9 130210161 - FAM159B chr5 63986325 + Exonic hg19 UCEC TCGA-AP-A05J-01A 5 0 Out-of-frame Inter-chr q33.3 q12.3 54678 ChimerSeq STARFusion TCGA_RNA-Seq ACTG1-HCG18 ACTG1 chr17 79478380 - HCG18 chr6 30256988 - Exonic hg19 UCEC TCGA-AP-A05J-01A 4 0 Out-of-frame Inter-chr q25.3 54679 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31802768 + C2 chr6 31868874 + Exonic hg19 UCEC TCGA-AP-A05J-01A 4 0 Out-of-frame Intra-chr p21.33 54680 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1107-H19 KIAA1107 chr1 92633439 + H19 chr11 2016686 - Exonic hg19 UCEC TCGA-AP-A05J-01A 4 0 Out-of-frame Inter-chr p22.1 p15.5 Tumor suppressor gene 54681 ChimerSeq STARFusion TCGA_RNA-Seq PPFIBP1-SMCO2 PPFIBP1 chr12 27677298 + SMCO2 chr12 27627719 + Exonic hg19 UCEC TCGA-AP-A05J-01A 4 0 Out-of-frame Intra-chr p11.23 p11.23 54682 ChimerSeq STARFusion TCGA_RNA-Seq IER2-STX10 IER2 chr19 13261366 + STX10 chr19 13255630 - Exonic hg19 UCEC TCGA-KJ-A3U4-01A 7 51 5'UTR-CDS Intra-chr p13.13 p13.13 Seq+ 54683 ChimerSeq STARFusion TCGA_RNA-Seq IER2-STX10 IER2 chr19 13263141 + STX10 chr19 13255630 - Exonic hg19 UCEC TCGA-KJ-A3U4-01A 3 51 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 54684 ChimerSeq STARFusion TCGA_RNA-Seq IER2-STX10 IER2 chr19 13261366 + STX10 chr19 13255485 - Exonic hg19 UCEC TCGA-KJ-A3U4-01A 3 51 5'UTR-CDS Intra-chr p13.13 p13.13 Seq+ 54685 ChimerSeq STARFusion TCGA_RNA-Seq SRGAP3-LHFPL4 SRGAP3 chr3 9290569 - LHFPL4 chr3 9547887 - Exonic hg19 UCEC TCGA-KJ-A3U4-01A 2 13 In-Frame Intra-chr p25.3 Tumor suppressor gene p25.3 Seq+ 54686 ChimerSeq STARFusion TCGA_RNA-Seq KCTD2-ARHGAP23 KCTD2 chr17 73055700 + ARHGAP23 chr17 36614346 + Exonic hg19 UCEC TCGA-KJ-A3U4-01A 3 4 In-Frame Intra-chr q25.1 q12 Seq+ 54687 ChimerSeq STARFusion TCGA_RNA-Seq VAPB-SLC17A9 VAPB chr20 56964573 + SLC17A9 chr20 61591856 + Exonic hg19 UCEC TCGA-DI-A1NO-01A 9 0 In-Frame Intra-chr q13.32 q13.33 Seq+ 54688 ChimerSeq STARFusion TCGA_RNA-Seq C3-GPR108 C3 chr19 6707087 - GPR108 chr19 6733312 - Exonic hg19 UCEC TCGA-DI-A1NO-01A 7 0 Out-of-frame Intra-chr p13.3 p13.3 54689 ChimerSeq STARFusion TCGA_RNA-Seq PELI2-KTN1 PELI2 chr14 56645182 + KTN1 chr14 56119568 + Exonic hg19 UCEC TCGA-DI-A1NO-01A 6 0 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 54690 ChimerSeq STARFusion TCGA_RNA-Seq E4F1-DNASE1L2 E4F1 chr16 2273693 + DNASE1L2 chr16 2286523 + Exonic hg19 UCEC TCGA-DI-A1NO-01A 5 0 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 54691 ChimerSeq STARFusion TCGA_RNA-Seq MSLN-RAB11FIP3 MSLN chr16 817470 + RAB11FIP3 chr16 538851 + Exonic hg19 UCEC TCGA-DI-A1NO-01A 5 0 Out-of-frame Intra-chr p13.3 Seq+ 54692 ChimerSeq STARFusion TCGA_RNA-Seq FDFT1-DEFB135 FDFT1 chr8 11667359 + DEFB135 chr8 11841930 + Exonic hg19 UCEC TCGA-DI-A1NO-01A 4 0 Out-of-frame Intra-chr p23.1 p23.1 Seq+ 54693 ChimerSeq STARFusion TCGA_RNA-Seq MSLN-RAB11FIP3 MSLN chr16 817012 + RAB11FIP3 chr16 538851 + Exonic hg19 UCEC TCGA-DI-A1NO-01A 4 0 Out-of-frame Intra-chr p13.3 Seq+ 54694 ChimerSeq STARFusion TCGA_RNA-Seq USP33-EBNA1BP2 USP33 chr1 78191307 - EBNA1BP2 chr1 43647455 - Exonic hg19 UCEC TCGA-DI-A1NO-01A 4 0 CDS-5'UTR Intra-chr p31.1 Tumor suppressor gene p34.2 54695 ChimerSeq STARFusion TCGA_RNA-Seq USP7-CARHSP1 USP7 chr16 9057064 - CARHSP1 chr16 8953192 - Exonic hg19 UCEC TCGA-DI-A1NO-01A 4 0 CDS-5'UTR Intra-chr p13.2 p13.2 54696 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT1-AQP7 B4GALT1 chr9 33135187 - AQP7 chr9 33401285 - Exonic hg19 UCEC TCGA-EY-A1GV-01A 7 0 CDS-5'UTR Intra-chr p21.1 p13.3 Seq+ 54697 ChimerSeq STARFusion TCGA_RNA-Seq STX5-PPP1R14B STX5 chr11 62591689 - PPP1R14B chr11 64011967 - Exonic hg19 UCEC TCGA-AJ-A3TW-01A 28 180 Out-of-frame Intra-chr q12.3 q13.1 Seq+ 54698 ChimerSeq STARFusion TCGA_RNA-Seq ESRRA-ZNF317 ESRRA chr11 64083440 + ZNF317 chr19 9273732 + Exonic hg19 UCEC TCGA-AJ-A3TW-01A 15 148 Out-of-frame Inter-chr q13.1 Transcription factor p13.2 Transcription factor Seq+ 54699 ChimerSeq STARFusion TCGA_RNA-Seq STX5-PPP1R14B STX5 chr11 62591682 - PPP1R14B chr11 64011967 - Exonic hg19 UCEC TCGA-AJ-A3TW-01A 6 180 Out-of-frame Intra-chr q12.3 q13.1 Seq+ 54700 ChimerSeq STARFusion TCGA_RNA-Seq PARD3-IL2RA PARD3 chr10 34805907 - IL2RA chr10 6067988 - Exonic hg19 UCEC TCGA-AJ-A3TW-01A 11 15 In-Frame Intra-chr p11.21 p15.1 Seq+ 54701 ChimerSeq STARFusion TCGA_RNA-Seq ZNF222-PSG5 ZNF222 chr19 44531642 + PSG5 chr19 43689299 - Exonic hg19 UCEC TCGA-AJ-A3TW-01A 5 39 In-Frame Intra-chr q13.31 Transcription factor q13.31 Seq+ 54702 ChimerSeq STARFusion TCGA_RNA-Seq ZNF177-FAM129C ZNF177 chr19 9435456 + FAM129C chr19 17638078 + Exonic hg19 UCEC TCGA-AJ-A3TW-01A 7 28 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.11 54703 ChimerSeq STARFusion TCGA_RNA-Seq ZNF559-FAM129C ZNF559 chr19 9435456 + FAM129C chr19 17638078 + Exonic hg19 UCEC TCGA-AJ-A3TW-01A 7 28 Out-of-frame Intra-chr p13.2 Transcription factor p13.11 Seq+ 54704 ChimerSeq STARFusion TCGA_RNA-Seq ZNF177-FAM129C ZNF177 chr19 9435456 + FAM129C chr19 17638078 + Exonic hg19 UCEC TCGA-AJ-A3TW-01A 7 24 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.11 54705 ChimerSeq STARFusion TCGA_RNA-Seq ZNF177-FAM129C ZNF177 chr19 9434904 + FAM129C chr19 17638078 + Exonic hg19 UCEC TCGA-AJ-A3TW-01A 2 28 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.11 54706 ChimerSeq STARFusion TCGA_RNA-Seq ZNF559-FAM129C ZNF559 chr19 9434904 + FAM129C chr19 17638078 + Exonic hg19 UCEC TCGA-AJ-A3TW-01A 2 28 Out-of-frame Intra-chr p13.2 Transcription factor p13.11 Seq+ 54707 ChimerSeq STARFusion TCGA_RNA-Seq FARS2-DTNBP1 FARS2 chr6 5613553 + DTNBP1 chr6 15593312 - Exonic hg19 UCEC TCGA-AJ-A3TW-01A 3 12 In-Frame Intra-chr p25.1 p22.3 Seq+ 54708 ChimerSeq STARFusion TCGA_RNA-Seq PSAP-PCID2 PSAP chr10 73610939 - PCID2 chr13 113854830 - Exonic hg19 UCEC TCGA-AJ-A3TW-01A 3 8 Out-of-frame Inter-chr q22.1 q34 Seq+ 54709 ChimerSeq STARFusion TCGA_RNA-Seq SEMA3B-GNAI2 SEMA3B chr3 50311488 + GNAI2 chr3 50289532 + Exonic hg19 UCEC TCGA-AJ-A3TW-01A 3 8 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 54710 ChimerSeq STARFusion TCGA_RNA-Seq CHD7-RAB2A CHD7 chr8 61591641 + RAB2A chr8 61471411 + Exonic hg19 UCEC TCGA-AJ-A3TW-01A 2 6 5'UTR-CDS Intra-chr q12.2 q12.1 Seq+ 54711 ChimerSeq STARFusion TCGA_RNA-Seq NDUFA13-SUGP1 NDUFA13 chr19 19627141 + SUGP1 chr19 19391100 - Exonic hg19 UCEC TCGA-AJ-A3TW-01A 2 0 In-Frame Intra-chr p13.11 p13.11 Seq+ 54712 ChimerSeq STARFusion TCGA_RNA-Seq YJEFN3-SUGP1 YJEFN3 chr19 19627141 + SUGP1 chr19 19391100 - Exonic hg19 UCEC TCGA-AJ-A3TW-01A 2 0 5'UTR-CDS Intra-chr p13.11 p13.11 54713 ChimerSeq STARFusion TCGA_RNA-Seq RPL5-SQSTM1 RPL5 chr1 93297674 + SQSTM1 chr5 179263436 + Exonic hg19 UCEC TCGA-AJ-A3EK-01A 2 1 Out-of-frame Inter-chr p22.1 Tumor suppressor gene q35.3 54714 ChimerSeq STARFusion TCGA_RNA-Seq RPA1-PAFAH1B1 RPA1 chr17 1787206 + PAFAH1B1 chr17 2587434 + Exonic hg19 UCEC TCGA-AP-A05H-01A 13 0 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p13.3 Tumor suppressor gene 54715 ChimerSeq STARFusion TCGA_RNA-Seq CBWD2-TDP1 CBWD2 chr2 114212355 + TDP1 chr14 90485660 + Exonic hg19 UCEC TCGA-AP-A05H-01A 6 0 Out-of-frame Inter-chr q14.1 q32.11 Seq+ 54716 ChimerSeq STARFusion TCGA_RNA-Seq HEPHL1-PANX1 HEPHL1 chr11 93800909 + PANX1 chr11 93862494 + Exonic hg19 UCEC TCGA-AP-A05H-01A 6 0 Out-of-frame Intra-chr q21 q21 54717 ChimerSeq STARFusion TCGA_RNA-Seq KIF26A-CKB KIF26A chr14 104618798 + CKB chr14 103988842 - Exonic hg19 UCEC TCGA-AP-A05H-01A 6 0 CDS-5'UTR Intra-chr q32.33 q32.33 54718 ChimerSeq STARFusion TCGA_RNA-Seq RPL18-IGF2 RPL18 chr19 49119137 - IGF2 chr11 2152923 - Exonic hg19 UCEC TCGA-AP-A05H-01A 6 0 Out-of-frame Inter-chr q13.33 p15.5 Oncogene 54719 ChimerSeq STARFusion TCGA_RNA-Seq TMCO4-LPHN2 TMCO4 chr1 20097035 - LPHN2 chr1 81879856 + Exonic hg19 UCEC TCGA-AP-A05H-01A 5 0 CDS-5'UTR Intra-chr p36.13 54720 ChimerSeq STARFusion TCGA_RNA-Seq RLBP1-IFITM1 RLBP1 chr15 89754987 - IFITM1 chr11 314942 + Exonic hg19 UCEC TCGA-AP-A05H-01A 4 0 Out-of-frame Inter-chr q26.1 p15.5 Oncogene 54721 ChimerSeq STARFusion TCGA_RNA-Seq RLBP1-IFITM2 RLBP1 chr15 89754987 - IFITM2 chr11 309033 + Exonic hg19 UCEC TCGA-AP-A05H-01A 4 0 Out-of-frame Inter-chr q26.1 p15.5 54722 ChimerSeq STARFusion TCGA_RNA-Seq ACTBP12-POLDIP3 ACTBP12 chr1 92694646 - POLDIP3 chr22 42999079 - Exonic hg19 UCEC TCGA-AP-A05H-01A 3 0 Out-of-frame Inter-chr p22.1 q13.2 54723 ChimerSeq STARFusion TCGA_RNA-Seq ARL5A-SLC35F5 ARL5A chr2 152663335 - SLC35F5 chr2 114503916 - Exonic hg19 UCEC TCGA-AP-A05H-01A 3 0 Out-of-frame Intra-chr q23.3 q14.1 54724 ChimerSeq STARFusion TCGA_RNA-Seq EDF1-FAM159B EDF1 chr9 139757358 - FAM159B chr5 63986324 + Exonic hg19 UCEC TCGA-AP-A05H-01A 3 0 CDS-5'UTR Inter-chr q34.3 q12.3 54725 ChimerSeq STARFusion TCGA_RNA-Seq GPR56-IGF2 GPR56 chr16 57698060 + IGF2 chr11 2153199 - Exonic hg19 UCEC TCGA-AP-A05H-01A 3 0 Out-of-frame Inter-chr q21 p15.5 Oncogene 54726 ChimerSeq STARFusion TCGA_RNA-Seq LINC00987-UBL5 LINC00987 chr12 9392700 + UBL5 chr19 9940692 + Exonic hg19 UCEC TCGA-AP-A05H-01A 3 0 Out-of-frame Inter-chr p13.31 p13.2 Tumor suppressor gene 54727 ChimerSeq STARFusion TCGA_RNA-Seq RPSA-WIBG RPSA chr3 39450215 + WIBG chr12 56308150 - Exonic hg19 UCEC TCGA-AP-A05H-01A 3 0 Out-of-frame Inter-chr p22.1 12q13.2 54728 ChimerSeq STARFusion TCGA_RNA-Seq RSPO1-IGF2 RSPO1 chr1 38077353 - IGF2 chr11 2151403 - Exonic hg19 UCEC TCGA-AP-A05H-01A 3 0 Out-of-frame Inter-chr p34.3 p15.5 Oncogene 54729 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-VARS ZBTB12 chr6 31868874 - VARS chr6 31747548 - Exonic hg19 UCEC TCGA-AP-A05H-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 54730 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC10-RPL31P50 DNAJC10 chr2 183653145 + RPL31P50 chr12 31750085 - Exonic hg19 UCEC TCGA-D1-A0ZV-01A 4 0 Out-of-frame Inter-chr q32.1 p11.21 54731 ChimerSeq STARFusion TCGA_RNA-Seq HERPUD2-ANLN HERPUD2 chr7 35733794 - ANLN chr7 36489274 + Exonic hg19 UCEC TCGA-D1-A0ZZ-01A 6 0 In-Frame Intra-chr p14.2 p14.2 54732 ChimerSeq STARFusion TCGA_RNA-Seq TTC3-THADA TTC3 chr21 38512973 + THADA chr2 43571376 - Exonic hg19 UCEC TCGA-A5-A0GE-01A 9 0 Out-of-frame Inter-chr q22.13 p21 Seq+ 54733 ChimerSeq STARFusion TCGA_RNA-Seq IGHMBP2-GPR137 IGHMBP2 chr11 68679071 + GPR137 chr11 64055812 + Exonic hg19 UCEC TCGA-SL-A6J9-01A 4 18 In-Frame Intra-chr q13.3 q13.1 Seq+ 54734 ChimerSeq STARFusion TCGA_RNA-Seq IGHMBP2-GPR137 IGHMBP2 chr11 68679071 + GPR137 chr11 64054437 + Exonic hg19 UCEC TCGA-SL-A6J9-01A 2 18 In-Frame Intra-chr q13.3 q13.1 Seq+ 54735 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB7A-MAP2K2 ZBTB7A chr19 4066680 - MAP2K2 chr19 4090706 - Exonic hg19 UCEC TCGA-SL-A6J9-01A 6 2 5'UTR-CDS Intra-chr p13.3 Transcription factor p13.3 STE:STE7 Oncogene Seq+ 54736 ChimerSeq STARFusion TCGA_RNA-Seq HID1-HN1 HID1 chr17 72954236 - HN1 chr17 73132345 - Exonic hg19 UCEC TCGA-SL-A6J9-01A 2 13 Out-of-frame Intra-chr q25.1 Seq+ 54737 ChimerSeq STARFusion TCGA_RNA-Seq COG4-VAC14 COG4 chr16 70524233 - VAC14 chr16 70806075 - Exonic hg19 UCEC TCGA-SL-A6J9-01A 3 7 Out-of-frame Intra-chr q22.1 q22.2 Seq+ 54738 ChimerSeq STARFusion TCGA_RNA-Seq SPAST-YIPF4 SPAST chr2 32289315 + YIPF4 chr2 32523303 + Exonic hg19 UCEC TCGA-SL-A6J9-01A 3 2 Out-of-frame Intra-chr p22.3 p22.3 54739 ChimerSeq STARFusion TCGA_RNA-Seq SART3-DAO SART3 chr12 108938915 - DAO chr12 109270446 + Exonic hg19 UCEC TCGA-BG-A3PP-01A 37 154 CDS-5'UTR Intra-chr q23.3 q24.11 Seq+ 54740 ChimerSeq STARFusion TCGA_RNA-Seq SART3-DAO SART3 chr12 108938915 - DAO chr12 109278774 + Exonic hg19 UCEC TCGA-BG-A3PP-01A 12 154 CDS-5'UTR Intra-chr q23.3 q24.11 Seq+ 54741 ChimerSeq STARFusion TCGA_RNA-Seq SART3-DAO SART3 chr12 108938915 - DAO chr12 109270449 + Exonic hg19 UCEC TCGA-BG-A3PP-01A 7 154 CDS-5'UTR Intra-chr q23.3 q24.11 Seq+ 54742 ChimerSeq STARFusion TCGA_RNA-Seq STAG1-FAM168A STAG1 chr3 136471037 - FAM168A chr11 73179537 - Exonic hg19 UCEC TCGA-BG-A3PP-01A 17 36 5'UTR-5'UTR Inter-chr q22.3 q13.4 Seq+ 54743 ChimerSeq STARFusion TCGA_RNA-Seq SLC38A10-OGFOD3 SLC38A10 chr17 79244718 - OGFOD3 chr17 80356195 - Exonic hg19 UCEC TCGA-BG-A3PP-01A 12 32 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 54744 ChimerSeq STARFusion TCGA_RNA-Seq VAX2-PAIP2B VAX2 chr2 71127998 + PAIP2B chr2 71429730 - Exonic hg19 UCEC TCGA-BG-A3PP-01A 7 42 CDS-5'UTR Intra-chr p13.3 Transcription factor p13.3 Seq+ 54745 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD27-SLC7A9 ANKRD27 chr19 33135231 - SLC7A9 chr19 33321590 - Exonic hg19 UCEC TCGA-BG-A3PP-01A 3 35 Out-of-frame Intra-chr q13.11 q13.11 Seq+ 54746 ChimerSeq STARFusion TCGA_RNA-Seq AKT2-YIF1B AKT2 chr19 40791088 - YIF1B chr19 38800283 - Exonic hg19 UCEC TCGA-BG-A3PP-01A 4 29 5'UTR-5'UTR Intra-chr q13.2 AGC:Akt Oncogene q13.2 Seq+ 54747 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-ARHGEF17 FCHSD2 chr11 72578910 - ARHGEF17 chr11 73057928 + Exonic hg19 UCEC TCGA-BG-A3PP-01A 6 21 In-Frame Intra-chr q13.4 q13.4 Seq+ 54748 ChimerSeq STARFusion TCGA_RNA-Seq PPP2R1A-ZNF610 PPP2R1A chr19 52729061 + ZNF610 chr19 52868951 + Exonic hg19 UCEC TCGA-BG-A3PP-01A 4 9 In-Frame Intra-chr q13.41 Oncogene q13.41 Transcription factor Seq+ 54749 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-ZNF317 PVT1 chr8 128806980 + ZNF317 chr19 9266601 + Exonic hg19 UCEC TCGA-BG-A3PP-01A 4 1 5'UTR-5'UTR Inter-chr q24.21 p13.2 Transcription factor 54750 ChimerSeq STARFusion TCGA_RNA-Seq VPRBP-C2CD3 VPRBP chr3 51533889 - C2CD3 chr11 73850873 - Exonic hg19 UCEC TCGA-BG-A3PP-01A 3 5 5'UTR-CDS Inter-chr q13.4 Seq+ 54751 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-VANGL1 WASF2 chr1 27816497 - VANGL1 chr1 116193898 + Exonic hg19 UCEC TCGA-BG-A3PP-01A 2 3 5'UTR-5'UTR Intra-chr p36.11 p13.1 Seq+ 54752 ChimerSeq STARFusion TCGA_RNA-Seq SPATS2-DNAJC22 SPATS2 chr12 49765073 + DNAJC22 chr12 49745100 + Exonic hg19 UCEC TCGA-BG-A3PP-01A 2 1 5'UTR-CDS Intra-chr q13.12 q13.12 54753 ChimerSeq STARFusion TCGA_RNA-Seq TC2N-CATSPERB TC2N chr14 92302715 - CATSPERB chr14 92185822 - Exonic hg19 UCEC TCGA-BG-A3PP-01A 2 1 5'UTR-CDS Intra-chr 54754 ChimerSeq STARFusion TCGA_RNA-Seq IRF2BPL-ATP2B4 IRF2BPL chr14 77491249 - ATP2B4 chr1 203713053 + Exonic hg19 UCEC TCGA-BS-A0V8-01A 5 0 Out-of-frame Inter-chr q24.3 q32.1 54755 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R37-CBLC PPP1R37 chr19 45646891 + CBLC chr19 45303638 + Exonic hg19 UCEC TCGA-AX-A2H2-01A 30 0 In-Frame Intra-chr q13.32 q13.32 Seq+ 54756 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-LINC00948 CCDC6 chr10 61665880 - LINC00948 chr10 61498320 - Exonic hg19 UCEC TCGA-AX-A2H2-01A 16 0 Out-of-frame Intra-chr q21.2 54757 ChimerSeq STARFusion TCGA_RNA-Seq DMWD-HRSP12 DMWD chr19 46294163 - HRSP12 chr8 99120979 - Exonic hg19 UCEC TCGA-AX-A2H2-01A 16 0 Out-of-frame Inter-chr q13.32 Seq+ 54758 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R37-CBLC PPP1R37 chr19 45645716 + CBLC chr19 45303638 + Exonic hg19 UCEC TCGA-AX-A2H2-01A 10 0 Out-of-frame Intra-chr q13.32 q13.32 Seq+ 54759 ChimerSeq STARFusion TCGA_RNA-Seq NAIP-IFI27 NAIP chr5 70281590 - IFI27 chr14 94582131 + Exonic hg19 UCEC TCGA-AX-A2H2-01A 8 0 Out-of-frame Inter-chr q13.2 q32.12 54760 ChimerSeq STARFusion TCGA_RNA-Seq PARD3-DYNLL2 PARD3 chr10 34985246 - DYNLL2 chr17 56164443 + Exonic hg19 UCEC TCGA-AX-A2H2-01A 8 0 CDS-5'UTR Inter-chr p11.21 q22 Seq+ 54761 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD28-COLQ ANKRD28 chr3 15900884 - COLQ chr3 15531144 - Exonic hg19 UCEC TCGA-AX-A2H2-01A 7 0 Out-of-frame Intra-chr p25.1 p25.1 Seq+ 54762 ChimerSeq STARFusion TCGA_RNA-Seq SYMPK-OPA3 SYMPK chr19 46366316 - OPA3 chr19 46057169 - Exonic hg19 UCEC TCGA-AX-A2H2-01A 7 0 5'UTR-CDS Intra-chr q13.32 q13.32 54763 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-TYRO3 IGKC chr2 89156966 - TYRO3 chr15 41854865 + Exonic hg19 UCEC TCGA-AX-A2H2-01A 5 0 Out-of-frame Inter-chr p11.2 q15.1 TK:Axl 54764 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGH@ GATAD1 chr7 92076851 + IGH@ chr14 106209411 - Exonic hg19 UCEC TCGA-AX-A2H2-01A 4 0 Out-of-frame Inter-chr q21.2 32.33 54765 ChimerSeq STARFusion TCGA_RNA-Seq GATAD1-IGHG1 GATAD1 chr7 92076851 + IGHG1 chr14 106209411 - Exonic hg19 UCEC TCGA-AX-A2H2-01A 4 0 Out-of-frame Inter-chr q21.2 q32.33 54766 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-INPP5A IGH@ chr14 106111040 - INPP5A chr10 134511407 + Exonic hg19 UCEC TCGA-AX-A2H2-01A 4 0 Out-of-frame Inter-chr 32.33 q26.3 54767 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-INPP5A IGHG1 chr14 106209321 - INPP5A chr10 134511407 + Exonic hg19 UCEC TCGA-AX-A2H2-01A 4 0 Out-of-frame Inter-chr q32.33 q26.3 54768 ChimerSeq STARFusion TCGA_RNA-Seq MTDH-SDC2 MTDH chr8 98673401 + SDC2 chr8 97605708 + Exonic hg19 UCEC TCGA-AX-A1CP-01A 18 0 In-Frame Intra-chr q22.1 q22.1 Seq+ 54769 ChimerSeq STARFusion TCGA_RNA-Seq OPA3-RDH8 OPA3 chr19 46087881 - RDH8 chr19 10127733 + Exonic hg19 UCEC TCGA-B5-A1MY-01A 4 0 In-Frame Intra-chr q13.32 p13.2 54770 ChimerSeq STARFusion TCGA_RNA-Seq SERINC5-FBXO16 SERINC5 chr5 79498705 - FBXO16 chr8 28286253 - Exonic hg19 UCEC TCGA-DF-A2KU-01A 2 1 Out-of-frame Inter-chr q14.1 p21.1 54771 ChimerSeq STARFusion TCGA_RNA-Seq RARG-MFSD5 RARG chr12 53621146 - MFSD5 chr12 53646602 + Exonic hg19 UCEC TCGA-EO-A1Y5-01A 33 0 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 Seq+ 54772 ChimerSeq STARFusion TCGA_RNA-Seq EEF1GP1-ENG EEF1GP1 chr7 124674368 + ENG chr9 130605524 - Exonic hg19 UCEC TCGA-EO-A1Y5-01A 22 0 Out-of-frame Inter-chr q31.33 q34.11 54773 ChimerSeq STARFusion TCGA_RNA-Seq INTS4-NDUFC2 INTS4 chr11 77594878 - NDUFC2 chr11 77784187 - Exonic hg19 UCEC TCGA-EO-A1Y5-01A 6 0 In-Frame Intra-chr q14.1 q14.1 54774 ChimerSeq STARFusion TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 124914159 - SCARB1 chr12 125279814 - Exonic hg19 UCEC TCGA-EO-A1Y5-01A 4 0 In-Frame Intra-chr q24.31 q24.31 Seq+ 54775 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL671P-HCG4P7 RN7SL671P chr4 1870886 - HCG4P7 chr6 29855588 - Exonic hg19 UCEC TCGA-EO-A1Y5-01A 4 0 Out-of-frame Inter-chr 54776 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-INPP5A IGH@ chr14 106111040 - INPP5A chr10 134511407 + Exonic hg19 UCEC TCGA-B5-A1MR-01A 5 0 Out-of-frame Inter-chr 32.33 q26.3 54777 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-INPP5A IGHG1 chr14 106209321 - INPP5A chr10 134511407 + Exonic hg19 UCEC TCGA-B5-A1MR-01A 5 0 Out-of-frame Inter-chr q32.33 q26.3 54778 ChimerSeq STARFusion TCGA_RNA-Seq CNPY2-CD79B CNPY2 chr12 56704328 - CD79B chr17 62008732 - Exonic hg19 UCEC TCGA-B5-A1MR-01A 4 0 Out-of-frame Inter-chr q13.3 q23.3 Oncogene 54779 ChimerSeq STARFusion TCGA_RNA-Seq RPL14-SRP14 RPL14 chr3 40503471 + SRP14 chr15 40328611 - Exonic hg19 UCEC TCGA-E6-A1M0-01A 5 0 Out-of-frame Inter-chr p22.1 q15.1 54780 ChimerSeq STARFusion TCGA_RNA-Seq RPL14-MPRIPP1 RPL14 chr3 40503501 + MPRIPP1 chr3 44621975 - Exonic hg19 UCEC TCGA-E6-A1M0-01A 4 0 Out-of-frame Intra-chr p22.1 54781 ChimerSeq STARFusion TCGA_RNA-Seq FTL-ZNF536 FTL chr19 49469662 + ZNF536 chr19 31039216 + Exonic hg19 UCEC TCGA-BS-A0UA-01A 4 0 Out-of-frame Intra-chr q13.33 q12 Transcription factor 54782 ChimerSeq STARFusion TCGA_RNA-Seq POLN-TFF3 POLN chr4 2078366 - TFF3 chr21 43733709 - Exonic hg19 UCEC TCGA-BS-A0UA-01A 4 0 Out-of-frame Inter-chr p16.3 q22.3 54783 ChimerSeq STARFusion TCGA_RNA-Seq CEP70-GYG1 CEP70 chr3 138289876 - GYG1 chr3 148741840 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 86 718 In-Frame Intra-chr q22.3 q24 Seq+ 54784 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-RAB5C FAM222B chr17 27169700 - RAB5C chr17 40282608 - Exonic hg19 UCEC TCGA-AJ-A3EM-01A 47 267 5'UTR-5'UTR Intra-chr q11.2 q21.2 Seq+ 54785 ChimerSeq STARFusion TCGA_RNA-Seq HMBOX1-PNOC HMBOX1 chr8 28748195 + PNOC chr8 28186652 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 62 145 5'UTR-5'UTR Intra-chr p21.1 Transcription factor p21.1 Seq+ 54786 ChimerSeq STARFusion TCGA_RNA-Seq DEPDC5-BID DEPDC5 chr22 32154619 + BID chr22 18232940 - Exonic hg19 UCEC TCGA-AJ-A3EM-01A 41 166 In-Frame Intra-chr q12.2 q11.21 Seq+ 54787 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-RAB5C FAM222B chr17 27139227 - RAB5C chr17 40282608 - Exonic hg19 UCEC TCGA-AJ-A3EM-01A 14 267 5'UTR-5'UTR Intra-chr q11.2 q21.2 Seq+ 54788 ChimerSeq STARFusion TCGA_RNA-Seq FAM222B-RAB5C FAM222B chr17 27161311 - RAB5C chr17 40282608 - Exonic hg19 UCEC TCGA-AJ-A3EM-01A 6 267 5'UTR-5'UTR Intra-chr q11.2 q21.2 Seq+ 54789 ChimerSeq STARFusion TCGA_RNA-Seq USP6NL-VPS26A USP6NL chr10 11543100 - VPS26A chr10 70915568 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 34 111 In-Frame Intra-chr p14 q22.1 Seq+ 54790 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-CYSTM1 ANKHD1 chr5 139876863 + CYSTM1 chr5 139622890 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 15 136 In-Frame Intra-chr q31.3 q31.3 54791 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-CYSTM1 ANKHD1 chr5 139866645 + CYSTM1 chr5 139622890 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 8 136 In-Frame Intra-chr q31.3 q31.3 54792 ChimerSeq STARFusion TCGA_RNA-Seq SPATA13-HSCB SPATA13 chr13 24735071 + HSCB chr22 29147229 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 13 71 5'UTR-CDS Inter-chr q12.12 q12.1 Seq+ 54793 ChimerSeq STARFusion TCGA_RNA-Seq ACO2-ARHGAP8 ACO2 chr22 41895866 + ARHGAP8 chr22 45098372 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 15 62 5'UTR-5'UTR Intra-chr q13.2 q13.31 Seq+ 54794 ChimerSeq STARFusion TCGA_RNA-Seq ACO2-PRR5 ACO2 chr22 41895866 + PRR5 chr22 45098372 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 15 62 5'UTR-5'UTR Intra-chr q13.2 q13.31 Tumor suppressor gene Seq+ 54795 ChimerSeq STARFusion TCGA_RNA-Seq WAC-ATP5G1P1 WAC chr10 28878780 + ATP5G1P1 chr14 106003495 - Exonic hg19 UCEC TCGA-AJ-A3EM-01A 3 99 Out-of-frame Inter-chr p12.1 Seq+ 54796 ChimerSeq STARFusion TCGA_RNA-Seq PIEZO1-GALNS PIEZO1 chr16 88851309 - GALNS chr16 88893246 - Exonic hg19 UCEC TCGA-AJ-A3EM-01A 16 35 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 54797 ChimerSeq STARFusion TCGA_RNA-Seq ACO2-ARHGAP8 ACO2 chr22 41895866 + ARHGAP8 chr22 45110471 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 6 62 5'UTR-5'UTR Intra-chr q13.2 q13.31 Seq+ 54798 ChimerSeq STARFusion TCGA_RNA-Seq ACO2-PRR5 ACO2 chr22 41895866 + PRR5 chr22 45110471 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 6 62 5'UTR-5'UTR Intra-chr q13.2 q13.31 Tumor suppressor gene Seq+ 54799 ChimerSeq STARFusion TCGA_RNA-Seq SPATA13-HSCB SPATA13 chr13 24735071 + HSCB chr22 29153066 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 2 71 5'UTR-CDS Inter-chr q12.12 q12.1 Seq+ 54800 ChimerSeq STARFusion TCGA_RNA-Seq ACO2-ARHGAP8 ACO2 chr22 41895866 + ARHGAP8 chr22 45121124 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 2 62 5'UTR-5'UTR Intra-chr q13.2 q13.31 Seq+ 54801 ChimerSeq STARFusion TCGA_RNA-Seq ACO2-PRR5 ACO2 chr22 41895866 + PRR5 chr22 45121124 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 2 62 5'UTR-5'UTR Intra-chr q13.2 q13.31 Tumor suppressor gene Seq+ 54802 ChimerSeq STARFusion TCGA_RNA-Seq MYO6-SENP6 MYO6 chr6 76459140 + SENP6 chr6 76405520 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 11 16 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 54803 ChimerSeq STARFusion TCGA_RNA-Seq TOB2-ACO2 TOB2 chr22 41842383 - ACO2 chr22 41903795 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 9 19 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 54804 ChimerSeq STARFusion TCGA_RNA-Seq RASGRP1-CD47 RASGRP1 chr15 38852022 - CD47 chr3 107799191 - Exonic hg19 UCEC TCGA-AJ-A3EM-01A 4 33 In-Frame Inter-chr q14 q13.12 Seq+ 54805 ChimerSeq STARFusion TCGA_RNA-Seq F11R-COPA F11R chr1 160990800 - COPA chr1 160310084 - Exonic hg19 UCEC TCGA-AJ-A3EM-01A 6 22 In-Frame Intra-chr q23.3 q23.2 Seq+ 54806 ChimerSeq STARFusion TCGA_RNA-Seq F11R-COPA F11R chr1 160990800 - COPA chr1 160310084 - Exonic hg19 UCEC TCGA-AJ-A3EM-01A 6 21 In-Frame Intra-chr q23.3 q23.2 Seq+ 54807 ChimerSeq STARFusion TCGA_RNA-Seq SUCO-DNM3 SUCO chr1 172502637 + DNM3 chr1 171956796 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 5 7 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 54808 ChimerSeq STARFusion TCGA_RNA-Seq TOB2-ACO2 TOB2 chr22 41842379 - ACO2 chr22 41903795 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 2 19 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 54809 ChimerSeq STARFusion TCGA_RNA-Seq LPP-WWTR1 LPP chr3 187943315 + WWTR1 chr3 149387678 - Exonic hg19 UCEC TCGA-AJ-A3EM-01A 2 18 5'UTR-5'UTR Intra-chr q27.3 Oncogene q25.1 Seq+ 54810 ChimerSeq STARFusion TCGA_RNA-Seq KIF26B-UBE2Q1 KIF26B chr1 245583047 + UBE2Q1 chr1 154524295 - Exonic hg19 UCEC TCGA-AJ-A3EM-01A 2 14 In-Frame Intra-chr q21.3 Seq+ 54811 ChimerSeq STARFusion TCGA_RNA-Seq CSNK2B-MICA CSNK2B chr6 31635747 + MICA chr6 31378320 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 2 4 In-Frame Intra-chr p21.33 54812 ChimerSeq STARFusion TCGA_RNA-Seq NEO1-LRSAM1 NEO1 chr15 73345146 + LRSAM1 chr9 130216775 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 2 1 CDS-5'UTR Inter-chr q24.1 q33.3 54813 ChimerSeq STARFusion TCGA_RNA-Seq AGK-NDUFB2 AGK chr7 141255367 + NDUFB2 chr7 140402666 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 2 0 In-Frame Intra-chr q34 Seq+ 54814 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80954857 - MRPS28 chr8 80831385 - Exonic hg19 UCEC TCGA-B5-A1MW-01A 3 17 Out-of-frame Intra-chr q21.13 q21.13 54815 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0247-PLEKHD1 KIAA0247 chr14 70078545 + PLEKHD1 chr14 69966832 + Exonic hg19 UCEC TCGA-B5-A1MW-01A 2 17 5'UTR-CDS Intra-chr q24.1 Seq+ 54816 ChimerSeq STARFusion TCGA_RNA-Seq NCALD-RRM2B NCALD chr8 102928037 - RRM2B chr8 103244532 - Exonic hg19 UCEC TCGA-B5-A1MW-01A 4 9 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 54817 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80963762 - MRPS28 chr8 80831383 - Exonic hg19 UCEC TCGA-B5-A1MW-01A 2 17 In-Frame Intra-chr q21.13 q21.13 54818 ChimerSeq STARFusion TCGA_RNA-Seq PTGES3-ARIH2 PTGES3 chr12 57081782 - ARIH2 chr3 49011132 + Exonic hg19 UCEC TCGA-B5-A1MW-01A 2 3 In-Frame Inter-chr q13.3 p21.31 54819 ChimerSeq STARFusion TCGA_RNA-Seq CLUHP3-CTBP1 CLUHP3 chr16 31720199 + CTBP1 chr4 1205677 - Exonic hg19 UCEC TCGA-AX-A063-01A 3 0 Out-of-frame Inter-chr p11.2 p16.3 54820 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA2-KCNU1 PLEKHA2 chr8 38814904 + KCNU1 chr8 36663787 + Exonic hg19 UCEC TCGA-K6-A3WQ-01A 4 15 In-Frame Intra-chr p11.22 p11.23 Seq+ 54821 ChimerSeq STARFusion TCGA_RNA-Seq EEF1DP3-STARD13 EEF1DP3 chr13 32520318 + STARD13 chr13 33692400 - Exonic hg19 UCEC TCGA-K6-A3WQ-01A 2 1 5'UTR-CDS Intra-chr q13.1 q13.1 Tumor suppressor gene 54822 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL2-MTG2 OSBPL2 chr20 60813653 + MTG2 chr20 60768472 + Exonic hg19 UCEC TCGA-K6-A3WQ-01A 2 1 Out-of-frame Intra-chr q13.33 q13.33 54823 ChimerSeq STARFusion TCGA_RNA-Seq POLR2B-FIP1L1 POLR2B chr4 57845170 + FIP1L1 chr4 54308820 + Exonic hg19 UCEC TCGA-BK-A139-01A 17 0 In-Frame Intra-chr q12 q12 Seq+ 54824 ChimerSeq STARFusion TCGA_RNA-Seq MUC1-GBA MUC1 chr1 155162577 - GBA chr1 155210508 - Exonic hg19 UCEC TCGA-BK-A139-01A 16 0 Out-of-frame Intra-chr q22 Oncogene Seq+ 54825 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-CHMP1A ANKRD11 chr16 89484692 - CHMP1A chr16 89718054 - Exonic hg19 UCEC TCGA-BK-A139-01A 10 0 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 54826 ChimerSeq STARFusion TCGA_RNA-Seq BOP1-CYHR1 BOP1 chr8 145488906 - CYHR1 chr8 145690479 - Exonic hg19 UCEC TCGA-BK-A139-01A 7 0 CDS-5'UTR Intra-chr q24.3 q24.3 Seq+ 54827 ChimerSeq STARFusion TCGA_RNA-Seq POLR2B-FIP1L1 POLR2B chr4 57845170 + FIP1L1 chr4 54306749 + Exonic hg19 UCEC TCGA-BK-A139-01A 7 0 In-Frame Intra-chr q12 q12 Seq+ 54828 ChimerSeq STARFusion TCGA_RNA-Seq UNK-ITGB4 UNK chr17 73781065 + ITGB4 chr17 73744922 + Exonic hg19 UCEC TCGA-BK-A139-01A 7 0 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 54829 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1737-C14orf166B KIAA1737 chr14 77564704 + C14orf166B chr14 77318708 + Exonic hg19 UCEC TCGA-BK-A139-01A 6 0 5'UTR-CDS Intra-chr Seq+ 54830 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC4-CCDC84 TRAPPC4 chr11 118892596 + CCDC84 chr11 118885704 + Exonic hg19 UCEC TCGA-BK-A139-01A 5 0 Out-of-frame Intra-chr 54831 ChimerSeq STARFusion TCGA_RNA-Seq WWP1-CPNE3 WWP1 chr8 87355159 + CPNE3 chr8 87540764 + Exonic hg19 UCEC TCGA-BK-A139-01A 4 0 5'UTR-5'UTR Intra-chr q21.3 q21.3 54832 ChimerSeq STARFusion TCGA_RNA-Seq WWP1-CPNE3 WWP1 chr8 87355159 + CPNE3 chr8 87527690 + Exonic hg19 UCEC TCGA-BK-A139-01A 4 0 5'UTR-5'UTR Intra-chr q21.3 q21.3 54833 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80950355 - MRPS28 chr8 80831383 - Exonic hg19 UCEC TCGA-EY-A5W2-01A 3 5 Out-of-frame Intra-chr q21.13 q21.13 54834 ChimerSeq STARFusion TCGA_RNA-Seq NUDT3-SPDEF NUDT3 chr6 34360041 - SPDEF chr6 34512261 - Exonic hg19 UCEC TCGA-AJ-A23M-01A 22 0 CDS-5'UTR Intra-chr p21.31 p21.31 Transcription factor Seq+ 54835 ChimerSeq STARFusion TCGA_RNA-Seq DAZAP1-HMHA1 DAZAP1 chr19 1418369 + HMHA1 chr19 1077856 + Exonic hg19 UCEC TCGA-AJ-A23M-01A 19 0 In-Frame Intra-chr p13.3 Seq+ 54836 ChimerSeq STARFusion TCGA_RNA-Seq MSH2-M1AP MSH2 chr2 47672796 + M1AP chr2 74787418 - Exonic hg19 UCEC TCGA-AJ-A23M-01A 16 0 Out-of-frame Intra-chr p21 Oncogene Tumor suppressor gene p13.1 54837 ChimerSeq STARFusion TCGA_RNA-Seq CCDC37-BCAM CCDC37 chr3 126152027 + BCAM chr19 45322836 + Exonic hg19 UCEC TCGA-AJ-A23M-01A 7 0 Out-of-frame Inter-chr q13.32 54838 ChimerSeq STARFusion TCGA_RNA-Seq CSMD2-ST13 CSMD2 chr1 34285314 - ST13 chr22 41246884 - Exonic hg19 UCEC TCGA-AJ-A23M-01A 5 0 Out-of-frame Inter-chr p35.1 q13.2 Tumor suppressor gene 54839 ChimerSeq STARFusion TCGA_RNA-Seq DCDC2-FAAH DCDC2 chr6 24302196 - FAAH chr1 46867763 + Exonic hg19 UCEC TCGA-AJ-A23M-01A 4 0 Out-of-frame Inter-chr p22.3 Tumor suppressor gene p33 Seq+ 54840 ChimerSeq STARFusion TCGA_RNA-Seq FGFR2-KIAA1598 FGFR2 chr10 123243212 - KIAA1598 chr10 118708508 - Exonic hg19 UCEC TCGA-5B-A90C-01A 128 1067 In-Frame Intra-chr q26.13 TK:FGFR Oncogene Seq+ 54841 ChimerSeq STARFusion TCGA_RNA-Seq WDHD1-DLGAP5 WDHD1 chr14 55493429 - DLGAP5 chr14 55621524 - Exonic hg19 UCEC TCGA-5B-A90C-01A 79 195 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 54842 ChimerSeq STARFusion TCGA_RNA-Seq RQCD1-ARPC2 RQCD1 chr2 219433701 + ARPC2 chr2 219103387 + Exonic hg19 UCEC TCGA-5B-A90C-01A 16 290 Out-of-frame Intra-chr q35 Seq+ 54843 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF2-PAQR6 ARHGEF2 chr1 155935094 - PAQR6 chr1 156214194 - Exonic hg19 UCEC TCGA-5B-A90C-01A 33 210 In-Frame Intra-chr q22 q22 Seq+ 54844 ChimerSeq STARFusion TCGA_RNA-Seq MED1-GSDMB MED1 chr17 37575970 - GSDMB chr17 38062524 - Exonic hg19 UCEC TCGA-5B-A90C-01A 38 168 In-Frame Intra-chr q12 Tumor suppressor gene q21.1 Seq+ 54845 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF2-PAQR6 ARHGEF2 chr1 155934799 - PAQR6 chr1 156214589 - Exonic hg19 UCEC TCGA-5B-A90C-01A 11 210 Out-of-frame Intra-chr q22 q22 Seq+ 54846 ChimerSeq STARFusion TCGA_RNA-Seq ZMIZ1-C10orf11 ZMIZ1 chr10 80878781 + C10orf11 chr10 77795766 + Exonic hg19 UCEC TCGA-5B-A90C-01A 16 129 5'UTR-CDS Intra-chr q22.3 Seq+ 54847 ChimerSeq STARFusion TCGA_RNA-Seq MED1-GSDMB MED1 chr17 37575970 - GSDMB chr17 38063240 - Exonic hg19 UCEC TCGA-5B-A90C-01A 5 168 In-Frame Intra-chr q12 Tumor suppressor gene q21.1 Seq+ 54848 ChimerSeq STARFusion TCGA_RNA-Seq STON2-RPGRIP1 STON2 chr14 81837332 - RPGRIP1 chr14 21756098 + Exonic hg19 UCEC TCGA-5B-A90C-01A 11 8 CDS-5'UTR Intra-chr q31.1 q11.2 Seq+ 54849 ChimerSeq STARFusion TCGA_RNA-Seq DNM1L-FGD4 DNM1L chr12 32884877 + FGD4 chr12 32791589 + Exonic hg19 UCEC TCGA-5B-A90C-01A 4 30 In-Frame Intra-chr p11.21 p11.21 Seq+ 54850 ChimerSeq STARFusion TCGA_RNA-Seq RERE-ENO1 RERE chr1 8763117 - ENO1 chr1 8934979 - Exonic hg19 UCEC TCGA-5B-A90C-01A 4 29 Out-of-frame Intra-chr p36.23 p36.23 Seq+ 54851 ChimerSeq STARFusion TCGA_RNA-Seq NR2F6-PLVAP NR2F6 chr19 17351480 - PLVAP chr19 17477004 - Exonic hg19 UCEC TCGA-5B-A90C-01A 7 13 Out-of-frame Intra-chr p13.11 Transcription factor p13.11 Seq+ 54852 ChimerSeq STARFusion TCGA_RNA-Seq EYA2-SLC2A10 EYA2 chr20 45644936 + SLC2A10 chr20 45353680 + Exonic hg19 UCEC TCGA-5B-A90C-01A 5 18 In-Frame Intra-chr q13.12 q13.12 Seq+ 54853 ChimerSeq STARFusion TCGA_RNA-Seq AMBRA1-HARBI1 AMBRA1 chr11 46563495 - HARBI1 chr11 46625459 - Exonic hg19 UCEC TCGA-5B-A90C-01A 3 25 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 54854 ChimerSeq STARFusion TCGA_RNA-Seq RERE-ENO1 RERE chr1 8763114 - ENO1 chr1 8934976 - Exonic hg19 UCEC TCGA-5B-A90C-01A 2 29 5'UTR-5'UTR Intra-chr p36.23 p36.23 Seq+ 54855 ChimerSeq STARFusion TCGA_RNA-Seq KEAP1-AP1M2 KEAP1 chr19 10597424 - AP1M2 chr19 10690534 - Exonic hg19 UCEC TCGA-5B-A90C-01A 3 21 In-Frame Intra-chr p13.2 Oncogene p13.2 Seq+ 54856 ChimerSeq STARFusion TCGA_RNA-Seq EYA2-SLC2A10 EYA2 chr20 45633723 + SLC2A10 chr20 45353680 + Exonic hg19 UCEC TCGA-5B-A90C-01A 2 18 In-Frame Intra-chr q13.12 q13.12 Seq+ 54857 ChimerSeq STARFusion TCGA_RNA-Seq GBF1-SFTPD GBF1 chr10 104005538 + SFTPD chr10 81697984 - Exonic hg19 UCEC TCGA-5B-A90C-01A 4 10 5'UTR-CDS Intra-chr q24.32 q22.3 Seq+ 54858 ChimerSeq STARFusion TCGA_RNA-Seq EML4-PKDCC EML4 chr2 42553392 + PKDCC chr2 42280379 + Exonic hg19 UCEC TCGA-5B-A90C-01A 4 9 Out-of-frame Intra-chr p21 Oncogene p21 Seq+ 54859 ChimerSeq STARFusion TCGA_RNA-Seq DHX34-SAE1 DHX34 chr19 47865950 + SAE1 chr19 47712416 + Exonic hg19 UCEC TCGA-5B-A90C-01A 3 11 In-Frame Intra-chr q13.32 q13.32 Seq+ 54860 ChimerSeq STARFusion TCGA_RNA-Seq UHRF1-HDGFRP2 UHRF1 chr19 4932968 + HDGFRP2 chr19 4488673 + Exonic hg19 UCEC TCGA-5B-A90C-01A 4 7 Out-of-frame Intra-chr p13.3 54861 ChimerSeq STARFusion TCGA_RNA-Seq GBF1-SFTPD GBF1 chr10 104005538 + SFTPD chr10 81700544 - Exonic hg19 UCEC TCGA-5B-A90C-01A 3 10 5'UTR-CDS Intra-chr q24.32 q22.3 Seq+ 54862 ChimerSeq STARFusion TCGA_RNA-Seq GEMIN2-CTAGE5 GEMIN2 chr14 39601272 + CTAGE5 chr14 39746138 + Exonic hg19 UCEC TCGA-5B-A90C-01A 4 5 In-Frame Intra-chr q21.1 q21.1 Seq+ 54863 ChimerSeq STARFusion TCGA_RNA-Seq RAB11FIP3-PLEC RAB11FIP3 chr16 532736 + PLEC chr8 145012860 - Exonic hg19 UCEC TCGA-5B-A90C-01A 4 5 Out-of-frame Inter-chr q24.3 Seq+ 54864 ChimerSeq STARFusion TCGA_RNA-Seq HAPLN3-RLBP1 HAPLN3 chr15 89430406 - RLBP1 chr15 89762306 - Exonic hg19 UCEC TCGA-5B-A90C-01A 2 8 CDS-5'UTR Intra-chr q26.1 q26.1 Seq+ 54865 ChimerSeq STARFusion TCGA_RNA-Seq GOSR1-DGAT2 GOSR1 chr17 28819771 + DGAT2 chr11 75507373 + Exonic hg19 UCEC TCGA-5B-A90C-01A 3 2 Out-of-frame Inter-chr q11.2 q13.5 Seq+ 54866 ChimerSeq STARFusion TCGA_RNA-Seq RPS10-CUEDC1 RPS10 chr6 34392446 - CUEDC1 chr17 55963240 - Exonic hg19 UCEC TCGA-5B-A90C-01A 2 4 5'UTR-5'UTR Inter-chr p21.31 q22 54867 ChimerSeq STARFusion TCGA_RNA-Seq ZMIZ1-CPEB3 ZMIZ1 chr10 80976031 + CPEB3 chr10 93904869 - Exonic hg19 UCEC TCGA-5B-A90C-01A 2 4 In-Frame Intra-chr q22.3 q23.32 Seq+ 54868 ChimerSeq STARFusion TCGA_RNA-Seq KMT2E-LHFPL3 KMT2E chr7 104654982 + LHFPL3 chr7 104546634 + Exonic hg19 UCEC TCGA-5B-A90C-01A 2 0 Out-of-frame Intra-chr q22.3 q22.2 54869 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC10-RPL31P50 DNAJC10 chr2 183653145 + RPL31P50 chr12 31750085 - Exonic hg19 UCEC TCGA-FI-A2EW-01A 4 0 Out-of-frame Inter-chr q32.1 p11.21 54870 ChimerSeq STARFusion TCGA_RNA-Seq TCF7L1-TMSB10 TCF7L1 chr2 85361573 + TMSB10 chr2 85133127 + Exonic hg19 UCEC TCGA-FI-A2EW-01A 4 0 CDS-5'UTR Intra-chr p11.2 Oncogene Transcription factor p11.2 54871 ChimerSeq STARFusion TCGA_RNA-Seq GAPDH-MAN1C1 GAPDH chr12 6647524 + MAN1C1 chr1 26112407 + Exonic hg19 UCEC TCGA-BG-A220-01A 4 0 Out-of-frame Inter-chr p13.31 p36.11 54872 ChimerSeq STARFusion TCGA_RNA-Seq FAM160B1-SHROOM3 FAM160B1 chr10 116596005 + SHROOM3 chr4 77476762 + Exonic hg19 UCEC TCGA-AP-A3K1-01A 5 18 In-Frame Inter-chr q25.3 q21.1 Seq+ 54873 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125718 - CXCL16 chr17 4637332 - Exonic hg19 UCEC TCGA-AP-A3K1-01A 6 10 Out-of-frame Inter-chr q12.2 p13.2 54874 ChimerSeq STARFusion TCGA_RNA-Seq GAPVD1-RABEPK GAPVD1 chr9 128067428 + RABEPK chr9 127965287 + Exonic hg19 UCEC TCGA-AP-A3K1-01A 5 10 CDS-5'UTR Intra-chr q33.3 q33.3 Seq+ 54875 ChimerSeq STARFusion TCGA_RNA-Seq SRCAP-GNB1L SRCAP chr16 30752028 + GNB1L chr22 19799970 - Exonic hg19 UCEC TCGA-AP-A3K1-01A 4 9 3'UTR-CDS Inter-chr p11.2 Transcription factor q11.21 Seq+ 54876 ChimerSeq STARFusion TCGA_RNA-Seq EIF5A-FTH1P10 EIF5A chr17 7210971 + FTH1P10 chr5 17354560 - Exonic hg19 UCEC TCGA-BS-A0TE-01A 3 0 Out-of-frame Inter-chr p13.1 p15.1 54877 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC10-RPL31P50 DNAJC10 chr2 183653145 + RPL31P50 chr12 31750085 - Exonic hg19 UCEC TCGA-B5-A0K6-01A 3 0 Out-of-frame Inter-chr q32.1 p11.21 54878 ChimerSeq STARFusion TCGA_RNA-Seq EDF1-FAM159B EDF1 chr9 139757358 - FAM159B chr5 63986324 + Exonic hg19 UCEC TCGA-B5-A0K6-01A 3 0 CDS-5'UTR Inter-chr q34.3 q12.3 54879 ChimerSeq STARFusion TCGA_RNA-Seq RPS27-FAM159B RPS27 chr1 153963699 + FAM159B chr5 63986324 + Exonic hg19 UCEC TCGA-B5-A0K6-01A 3 0 3'UTR-5'UTR Inter-chr q21.3 q12.3 54880 ChimerSeq STARFusion TCGA_RNA-Seq PCMT1-HSP90B1 PCMT1 chr6 150114805 + HSP90B1 chr12 104340634 + Exonic hg19 UCEC TCGA-AX-A3G7-01A 6 1 Out-of-frame Inter-chr q25.1 q23.3 Tumor suppressor gene Seq+ 54881 ChimerSeq STARFusion TCGA_RNA-Seq ATP2B4-TFEB ATP2B4 chr1 203696699 + TFEB chr6 41658973 - Exonic hg19 UCEC TCGA-AX-A3G7-01A 3 4 CDS-5'UTR Inter-chr q32.1 p21.1 Transcription factor Seq+ 54882 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-IGKC IGH@ chr14 106109474 - IGKC chr2 89156727 - Exonic hg19 UCEC TCGA-AX-A3G7-01A 3 2 Out-of-frame Inter-chr 32.33 p11.2 54883 ChimerSeq STARFusion TCGA_RNA-Seq WDR59-CFDP1 WDR59 chr16 75018862 - CFDP1 chr16 75339080 - Exonic hg19 UCEC TCGA-AX-A3G7-01A 3 2 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 54884 ChimerSeq STARFusion TCGA_RNA-Seq HSPA8-METTL3 HSPA8 chr11 122931834 - METTL3 chr14 21967183 - Exonic hg19 UCEC TCGA-AX-A3G7-01A 3 1 Out-of-frame Inter-chr q24.1 q11.2 54885 ChimerSeq STARFusion TCGA_RNA-Seq MET-CAV1 MET chr7 116381079 + CAV1 chr7 116199000 + Exonic hg19 UCEC TCGA-B5-A0JN-01A 19 40 In-Frame Intra-chr q31.2 TK:Met Oncogene q31.2 Tumor suppressor gene Seq+ 54886 ChimerSeq STARFusion TCGA_RNA-Seq KLC1-MARK3 KLC1 chr14 104095831 + MARK3 chr14 103969219 + Exonic hg19 UCEC TCGA-B5-A0JN-01A 18 22 5'UTR-CDS Intra-chr q32.33 q32.32 CAMK:CAMKL Seq+ 54887 ChimerSeq STARFusion TCGA_RNA-Seq AP2A2-VPS26A AP2A2 chr11 959505 + VPS26A chr10 70915568 + Exonic hg19 UCEC TCGA-B5-A0JN-01A 11 38 Out-of-frame Inter-chr p15.5 q22.1 Seq+ 54888 ChimerSeq STARFusion TCGA_RNA-Seq ASRGL1-CPSF7 ASRGL1 chr11 62124616 + CPSF7 chr11 61189080 - Exonic hg19 UCEC TCGA-B5-A0JN-01A 9 34 Out-of-frame Intra-chr q12.3 q12.2 Seq+ 54889 ChimerSeq STARFusion TCGA_RNA-Seq AP2A2-VPS26A AP2A2 chr11 959505 + VPS26A chr10 70916763 + Exonic hg19 UCEC TCGA-B5-A0JN-01A 6 38 In-Frame Inter-chr p15.5 q22.1 Seq+ 54890 ChimerSeq STARFusion TCGA_RNA-Seq CAPZB-APITD1 CAPZB chr1 19811930 - APITD1 chr1 10500404 + Exonic hg19 UCEC TCGA-B5-A0JN-01A 3 25 Out-of-frame Intra-chr p36.13 Tumor suppressor gene Seq+ 54891 ChimerSeq STARFusion TCGA_RNA-Seq THEM4-S100A10 THEM4 chr1 151867484 - S100A10 chr1 151958727 - Exonic hg19 UCEC TCGA-B5-A0JN-01A 6 10 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 54892 ChimerSeq STARFusion TCGA_RNA-Seq PEX14-KIF1B PEX14 chr1 10535059 + KIF1B chr1 10434374 + Exonic hg19 UCEC TCGA-B5-A0JN-01A 6 5 Out-of-frame Intra-chr p36.22 p36.22 Tumor suppressor gene Seq+ 54893 ChimerSeq STARFusion TCGA_RNA-Seq PHYHIPL-LINC00844 PHYHIPL chr10 60936719 + LINC00844 chr10 60760989 + Exonic hg19 UCEC TCGA-B5-A0JN-01A 4 10 Out-of-frame Intra-chr q21.1 q21.1 54894 ChimerSeq STARFusion TCGA_RNA-Seq KIAA0319L-PSMB2 KIAA0319L chr1 35972213 - PSMB2 chr1 36075009 - Exonic hg19 UCEC TCGA-B5-A0JN-01A 3 10 In-Frame Intra-chr p34.3 p34.3 Seq+ 54895 ChimerSeq STARFusion TCGA_RNA-Seq BRE-GPN1 BRE chr2 28152775 + GPN1 chr2 27872982 + Exonic hg19 UCEC TCGA-B5-A0JN-01A 4 5 In-Frame Intra-chr p23.3 Seq+ 54896 ChimerSeq STARFusion TCGA_RNA-Seq MRPL33-GPN1 MRPL33 chr2 28152775 + GPN1 chr2 27872982 + Exonic hg19 UCEC TCGA-B5-A0JN-01A 4 5 3'UTR-CDS Intra-chr p23.2 p23.3 54897 ChimerSeq STARFusion TCGA_RNA-Seq DNAJA3-ZDHHC16 DNAJA3 chr16 4498849 + ZDHHC16 chr10 99211428 + Exonic hg19 UCEC TCGA-B5-A0JN-01A 3 7 CDS-5'UTR Inter-chr Tumor suppressor gene q24.1 Seq+ 54898 ChimerSeq STARFusion TCGA_RNA-Seq HOOK1-FGGY HOOK1 chr1 60294524 + FGGY chr1 60223603 + Exonic hg19 UCEC TCGA-B5-A0JN-01A 4 3 In-Frame Intra-chr p32.1 p32.1 Seq+ 54899 ChimerSeq STARFusion TCGA_RNA-Seq ZNF157-UBA1 ZNF157 chrX 47230139 + UBA1 chrX 47070241 + Exonic hg19 UCEC TCGA-B5-A0JN-01A 2 8 In-Frame Intra-chr p11.3 Transcription factor p11.3 54900 ChimerSeq STARFusion TCGA_RNA-Seq TMEM184B-SUN2 TMEM184B chr22 38668890 - SUN2 chr22 39141816 - Exonic hg19 UCEC TCGA-B5-A0JN-01A 2 7 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 54901 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-PLXNB1 MAP4 chr3 48019355 - PLXNB1 chr3 48457168 - Exonic hg19 UCEC TCGA-B5-A0JN-01A 2 4 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 54902 ChimerSeq STARFusion TCGA_RNA-Seq C6orf141-ZNF529 C6orf141 chr6 49522870 + ZNF529 chr19 37073608 - Exonic hg19 UCEC TCGA-B5-A11Q-01A 4 0 Out-of-frame Inter-chr p12.3 q13.12 Transcription factor 54903 ChimerSeq STARFusion TCGA_RNA-Seq PIGR-STAG2 PIGR chr1 207101875 - STAG2 chrX 123094447 + Exonic hg19 UCEC TCGA-B5-A11Q-01A 4 0 Out-of-frame Inter-chr q32.1 q25 Oncogene 54904 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R13B-C14orf2 PPP1R13B chr14 104313636 - C14orf2 chr14 104381526 - Exonic hg19 UCEC TCGA-B5-A3S1-01A 28 71 In-Frame Intra-chr q32.33 q32.33 Seq+ 54905 ChimerSeq STARFusion TCGA_RNA-Seq KIF9-GYG1 KIF9 chr3 47323985 - GYG1 chr3 148741840 + Exonic hg19 UCEC TCGA-B5-A3S1-01A 17 38 5'UTR-CDS Intra-chr p21.31 q24 Seq+ 54906 ChimerSeq STARFusion TCGA_RNA-Seq UBR2-KANK2 UBR2 chr6 42532135 + KANK2 chr19 11287493 - Exonic hg19 UCEC TCGA-B5-A3S1-01A 6 45 Out-of-frame Inter-chr p21.1 p13.2 Seq+ 54907 ChimerSeq STARFusion TCGA_RNA-Seq ST14-APLP2 ST14 chr11 130078579 + APLP2 chr11 130010293 + Exonic hg19 UCEC TCGA-B5-A3S1-01A 9 27 In-Frame Intra-chr q24.3 q24.3 Seq+ 54908 ChimerSeq STARFusion TCGA_RNA-Seq LAMA5-RBBP8NL LAMA5 chr20 60911790 - RBBP8NL chr20 60992375 - Exonic hg19 UCEC TCGA-B5-A3S1-01A 3 43 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 54909 ChimerSeq STARFusion TCGA_RNA-Seq KIF9-GYG1 KIF9 chr3 47323630 - GYG1 chr3 148744547 + Exonic hg19 UCEC TCGA-B5-A3S1-01A 3 38 5'UTR-CDS Intra-chr p21.31 q24 Seq+ 54910 ChimerSeq STARFusion TCGA_RNA-Seq NDUFS7-STK11 NDUFS7 chr19 1388592 + STK11 chr19 1222984 + Exonic hg19 UCEC TCGA-B5-A3S1-01A 6 13 In-Frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Seq+ 54911 ChimerSeq STARFusion TCGA_RNA-Seq SAE1-RPA2 SAE1 chr19 47658470 + RPA2 chr1 28233793 - Exonic hg19 UCEC TCGA-B5-A3S1-01A 3 12 In-Frame Inter-chr q13.32 p35.3 Seq+ 54912 ChimerSeq STARFusion TCGA_RNA-Seq REV3L-FYN REV3L chr6 111732683 - FYN chr6 112101838 - Exonic hg19 UCEC TCGA-B5-A3S1-01A 3 9 CDS-5'UTR Intra-chr q21 q21 TK:Src Seq+ 54913 ChimerSeq STARFusion TCGA_RNA-Seq FAM168A-P4HA3 FAM168A chr11 73308968 - P4HA3 chr11 74000175 - Exonic hg19 UCEC TCGA-B5-A3S1-01A 2 11 5'UTR-CDS Intra-chr q13.4 q13.4 Seq+ 54914 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-IKZF3 ERBB2 chr17 37879913 + IKZF3 chr17 37944627 - Exonic hg19 UCEC TCGA-B5-A3S1-01A 3 6 Out-of-frame Intra-chr q12 Oncogene q21.1 Tumor suppressor gene Transcription factor Seq+ 54915 ChimerSeq STARFusion TCGA_RNA-Seq BRD4-ILVBL BRD4 chr19 15442647 - ILVBL chr19 15230892 - Exonic hg19 UCEC TCGA-B5-A3S1-01A 3 2 5'UTR-CDS Intra-chr p13.12 Atypical:BRD p13.12 54916 ChimerSeq STARFusion TCGA_RNA-Seq ZMYND8-EYA2 ZMYND8 chr20 45976600 - EYA2 chr20 45630067 + Exonic hg19 UCEC TCGA-B5-A3S1-01A 2 5 In-Frame Intra-chr q13.12 q13.12 Seq+ 54917 ChimerSeq STARFusion TCGA_RNA-Seq RNF214-SIDT2 RNF214 chr11 117117664 + SIDT2 chr11 117054790 + Exonic hg19 UCEC TCGA-B5-A3S1-01A 2 4 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 54918 ChimerSeq STARFusion TCGA_RNA-Seq SUFU-GBF1 SUFU chr10 104309863 + GBF1 chr10 104111013 + Exonic hg19 UCEC TCGA-B5-A3S1-01A 2 4 In-Frame Intra-chr q24.32 Oncogene Tumor suppressor gene q24.32 Seq+ 54919 ChimerSeq STARFusion TCGA_RNA-Seq BRD4-ILVBL BRD4 chr19 15443101 - ILVBL chr19 15230892 - Exonic hg19 UCEC TCGA-B5-A3S1-01A 2 2 5'UTR-CDS Intra-chr p13.12 Atypical:BRD p13.12 54920 ChimerSeq STARFusion TCGA_RNA-Seq MICALL1-SHC1 MICALL1 chr22 38302575 + SHC1 chr1 154938993 - Exonic hg19 UCEC TCGA-PG-A914 34 116 In-Frame Inter-chr q13.1 q21.3 Seq+ 54921 ChimerSeq STARFusion TCGA_RNA-Seq AMZ2-KDM1B AMZ2 chr17 66247319 + KDM1B chr6 18205768 + Exonic hg19 UCEC TCGA-PG-A914 18 63 Out-of-frame Inter-chr q24.2 p22.3 Seq+ 54922 ChimerSeq STARFusion TCGA_RNA-Seq TRIM2-FAM71F1 TRIM2 chr4 154217188 + FAM71F1 chr7 128349139 + Exonic hg19 UCEC TCGA-PG-A914 15 55 CDS-5'UTR Inter-chr q31.3 q32.1 Seq+ 54923 ChimerSeq STARFusion TCGA_RNA-Seq ZNF146-PGPEP1 ZNF146 chr19 36719721 + PGPEP1 chr19 18474201 + Exonic hg19 UCEC TCGA-PG-A914 9 78 5'UTR-CDS Intra-chr q13.12 Transcription factor p13.11 Seq+ 54924 ChimerSeq STARFusion TCGA_RNA-Seq ZNF146-PGPEP1 ZNF146 chr19 36719721 + PGPEP1 chr19 18474241 + Exonic hg19 UCEC TCGA-PG-A914 8 77 5'UTR-CDS Intra-chr q13.12 Transcription factor p13.11 Seq+ 54925 ChimerSeq STARFusion TCGA_RNA-Seq IP6K2-PRKAR2A IP6K2 chr3 48754590 - PRKAR2A chr3 48793877 - Exonic hg19 UCEC TCGA-PG-A914 12 45 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 54926 ChimerSeq STARFusion TCGA_RNA-Seq PICK1-MYPOP PICK1 chr22 38455352 + MYPOP chr19 46394581 - Exonic hg19 UCEC TCGA-PG-A914 13 41 Out-of-frame Inter-chr q13.1 q13.32 Transcription factor Seq+ 54927 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPA2B1-SKAP2 HNRNPA2B1 chr7 26232115 - SKAP2 chr7 26894509 - Exonic hg19 UCEC TCGA-PG-A914 15 27 3'UTR-CDS Intra-chr p15.2 p15.2 Seq+ 54928 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L3-RAB8A SIPA1L3 chr19 38397998 + RAB8A chr19 16236280 + Exonic hg19 UCEC TCGA-PG-A914 7 44 5'UTR-CDS Intra-chr q13.13 p13.11 Seq+ 54929 ChimerSeq STARFusion TCGA_RNA-Seq ZNF587-AURKC ZNF587 chr19 58361439 + AURKC chr19 57743110 + Exonic hg19 UCEC TCGA-PG-A914 13 20 Out-of-frame Intra-chr q13.43 Transcription factor q13.43 Oncogene Seq+ 54930 ChimerSeq STARFusion TCGA_RNA-Seq SIPA1L3-RAB8A SIPA1L3 chr19 38423332 + RAB8A chr19 16236280 + Exonic hg19 UCEC TCGA-PG-A914 6 42 5'UTR-CDS Intra-chr q13.13 p13.11 Seq+ 54931 ChimerSeq STARFusion TCGA_RNA-Seq MAP4K4-REV1 MAP4K4 chr2 102472600 + REV1 chr2 100055772 - Exonic hg19 UCEC TCGA-PG-A914 11 20 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 54932 ChimerSeq STARFusion TCGA_RNA-Seq IP6K2-PRKAR2A IP6K2 chr3 48752748 - PRKAR2A chr3 48793877 - Exonic hg19 UCEC TCGA-PG-A914 3 45 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 54933 ChimerSeq STARFusion TCGA_RNA-Seq P2RX5-MAP3K13 P2RX5 chr17 3591306 - MAP3K13 chr3 185046412 + Exonic hg19 UCEC TCGA-PG-A914 5 36 CDS-5'UTR Inter-chr p13.2 q27.2 Seq+ 54934 ChimerSeq STARFusion TCGA_RNA-Seq MTERFD3-CRY1 MTERFD3 chr12 107378893 - CRY1 chr12 107415970 - Exonic hg19 UCEC TCGA-PG-A914 7 26 5'UTR-CDS Intra-chr q23.3 Seq+ 54935 ChimerSeq STARFusion TCGA_RNA-Seq IP6K2-PRKAR2A IP6K2 chr3 48752822 - PRKAR2A chr3 48793877 - Exonic hg19 UCEC TCGA-PG-A914 2 45 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 54936 ChimerSeq STARFusion TCGA_RNA-Seq OXSR1-DLEC1 OXSR1 chr3 38234909 + DLEC1 chr3 38153168 + Exonic hg19 UCEC TCGA-PG-A914 5 29 Out-of-frame Intra-chr p22.2 p22.2 Tumor suppressor gene Seq+ 54937 ChimerSeq STARFusion TCGA_RNA-Seq SLC45A4-MROH5 SLC45A4 chr8 142264088 - MROH5 chr8 142451879 - Exonic hg19 UCEC TCGA-PG-A914 9 13 Out-of-frame Intra-chr q24.3 54938 ChimerSeq STARFusion TCGA_RNA-Seq REV3L-FYN REV3L chr6 111803953 - FYN chr6 112041265 - Exonic hg19 UCEC TCGA-PG-A914 4 32 CDS-5'UTR Intra-chr q21 q21 TK:Src Seq+ 54939 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D10A-ANK1 TBC1D10A chr22 30700520 - ANK1 chr8 41591587 - Exonic hg19 UCEC TCGA-PG-A914 6 24 In-Frame Inter-chr q12.2 p11.21 Seq+ 54940 ChimerSeq STARFusion TCGA_RNA-Seq FBLIM1-EFHD2 FBLIM1 chr1 16103782 + EFHD2 chr1 15756592 + Exonic hg19 UCEC TCGA-PG-A914 6 23 CDS-3'UTR Intra-chr p36.21 p36.21 Seq+ 54941 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H4-APOBEC3A ZC3H4 chr19 47614152 - APOBEC3A chr22 39353351 + Exonic hg19 UCEC TCGA-PG-A914 3 33 Out-of-frame Inter-chr q13.32 Seq+ 54942 ChimerSeq STARFusion TCGA_RNA-Seq MYO1E-TMCO3 MYO1E chr15 59664697 - TMCO3 chr13 114174931 + Exonic hg19 UCEC TCGA-PG-A914 6 19 Out-of-frame Inter-chr q22.2 q34 Seq+ 54943 ChimerSeq STARFusion TCGA_RNA-Seq OXSR1-DLEC1 OXSR1 chr3 38232330 + DLEC1 chr3 38153168 + Exonic hg19 UCEC TCGA-PG-A914 3 29 Out-of-frame Intra-chr p22.2 p22.2 Tumor suppressor gene Seq+ 54944 ChimerSeq STARFusion TCGA_RNA-Seq MTERFD3-CRY1 MTERFD3 chr12 107378893 - CRY1 chr12 107466832 - Exonic hg19 UCEC TCGA-PG-A914 3 26 5'UTR-CDS Intra-chr q23.3 Seq+ 54945 ChimerSeq STARFusion TCGA_RNA-Seq AP2A2-NLRC5 AP2A2 chr11 959505 + NLRC5 chr16 57067516 + Exonic hg19 UCEC TCGA-PG-A914 7 9 Out-of-frame Inter-chr p15.5 q13 Seq+ 54946 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPA2B1-SKAP2 HNRNPA2B1 chr7 26240192 - SKAP2 chr7 26883756 - Exonic hg19 UCEC TCGA-PG-A914 2 27 Out-of-frame Intra-chr p15.2 p15.2 Seq+ 54947 ChimerSeq STARFusion TCGA_RNA-Seq MYO1E-TMCO3 MYO1E chr15 59664697 - TMCO3 chr13 114193672 + Exonic hg19 UCEC TCGA-PG-A914 4 19 In-Frame Inter-chr q22.2 q34 Seq+ 54948 ChimerSeq STARFusion TCGA_RNA-Seq MTERFD3-CRY1 MTERFD3 chr12 107380747 - CRY1 chr12 107415970 - Exonic hg19 UCEC TCGA-PG-A914 2 26 5'UTR-CDS Intra-chr q23.3 Seq+ 54949 ChimerSeq STARFusion TCGA_RNA-Seq CTNNA1-WNT8A CTNNA1 chr5 138223331 + WNT8A chr5 137420187 + Exonic hg19 UCEC TCGA-PG-A914 5 12 In-Frame Intra-chr q31.2 Oncogene q31.2 Seq+ 54950 ChimerSeq STARFusion TCGA_RNA-Seq MPHOSPH9-CCDC92 MPHOSPH9 chr12 123682794 - CCDC92 chr12 124422377 - Exonic hg19 UCEC TCGA-PG-A914 5 11 Out-of-frame Intra-chr q24.31 Seq+ 54951 ChimerSeq STARFusion TCGA_RNA-Seq SPECC1-HM13 SPECC1 chr17 20135718 + HM13 chr20 30115287 + Exonic hg19 UCEC TCGA-PG-A914 4 11 Out-of-frame Inter-chr p11.2 q11.21 Seq+ 54952 ChimerSeq STARFusion TCGA_RNA-Seq ZNF587B-AURKC ZNF587B chr19 58350517 + AURKC chr19 57743110 + Exonic hg19 UCEC TCGA-PG-A914 3 15 In-Frame Intra-chr q13.43 Transcription factor q13.43 Oncogene 54953 ChimerSeq STARFusion TCGA_RNA-Seq SMURF2-GNA13 SMURF2 chr17 62657947 - GNA13 chr17 63014421 - Exonic hg19 UCEC TCGA-PG-A914 5 5 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 54954 ChimerSeq STARFusion TCGA_RNA-Seq BMP2K-ANXA3 BMP2K chr4 79697875 + ANXA3 chr4 79494334 + Exonic hg19 UCEC TCGA-PG-A914 4 6 Out-of-frame Intra-chr q21.21 q21.21 Seq+ 54955 ChimerSeq STARFusion TCGA_RNA-Seq CDK13-C7orf10 CDK13 chr7 40102699 + C7orf10 chr7 40256996 + Exonic hg19 UCEC TCGA-PG-A914 3 10 Out-of-frame Intra-chr p14.1 Seq+ 54956 ChimerSeq STARFusion TCGA_RNA-Seq DMPK-RCN3 DMPK chr19 46282522 - RCN3 chr19 50037450 + Exonic hg19 UCEC TCGA-PG-A914 3 9 Out-of-frame Intra-chr q13.32 q13.33 Seq+ 54957 ChimerSeq STARFusion TCGA_RNA-Seq BSCL2-C14orf159 BSCL2 chr11 62469940 - C14orf159 chr14 91662719 + Exonic hg19 UCEC TCGA-PG-A914 3 8 Out-of-frame Inter-chr q12.3 q32.11 Seq+ 54958 ChimerSeq STARFusion TCGA_RNA-Seq ZNF586-AURKC ZNF586 chr19 58301768 + AURKC chr19 57743110 + Exonic hg19 UCEC TCGA-PG-A914 2 10 3'UTR-CDS Intra-chr q13.43 Transcription factor q13.43 Oncogene 54959 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL671P-HCG4P7 RN7SL671P chr4 1870886 - HCG4P7 chr6 29855588 - Exonic hg19 UCEC TCGA-EC-A1QX-01A 5 0 Out-of-frame Inter-chr 54960 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P2 FTL chr19 49469059 + FTH1P2 chr1 228823170 + Exonic hg19 UCEC TCGA-AP-A1DO-01A 7 0 Out-of-frame Inter-chr q13.33 q42.13 54961 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 UCEC TCGA-AP-A0LO-01A 4 0 Out-of-frame Inter-chr p13.13 q13.1 54962 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC10-RPL31P50 DNAJC10 chr2 183653145 + RPL31P50 chr12 31750085 - Exonic hg19 UCEC TCGA-AP-A0LO-01A 3 0 Out-of-frame Inter-chr q32.1 p11.21 54963 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-HSPA1A ZBTB12 chr6 31868872 - HSPA1A chr6 31784780 + Exonic hg19 UCEC TCGA-AP-A0LO-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 54964 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-MMP27 TMEM123 chr11 102319543 - MMP27 chr11 102567222 - Exonic hg19 UCEC TCGA-FI-A2F8-01A 25 0 In-Frame Intra-chr q22.2 q22.2 Seq+ 54965 ChimerSeq STARFusion TCGA_RNA-Seq OTUB1-AHNAK OTUB1 chr11 63753986 + AHNAK chr11 62259303 - Exonic hg19 UCEC TCGA-FI-A2F8-01A 21 0 Out-of-frame Intra-chr q13.1 q12.3 Tumor suppressor gene Seq+ 54966 ChimerSeq STARFusion TCGA_RNA-Seq MECOM-LRRC31 MECOM chr3 169381124 - LRRC31 chr3 169587660 - Exonic hg19 UCEC TCGA-FI-A2F8-01A 8 0 5'UTR-5'UTR Intra-chr q26.2 Transcription factor q26.2 Seq+ 54967 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-MMP27 TMEM123 chr11 102319543 - MMP27 chr11 102567566 - Exonic hg19 UCEC TCGA-FI-A2F8-01A 8 0 In-Frame Intra-chr q22.2 q22.2 Seq+ 54968 ChimerSeq STARFusion TCGA_RNA-Seq ZNF217-BCAS1 ZNF217 chr20 52214170 - BCAS1 chr20 52570234 - Exonic hg19 UCEC TCGA-FI-A2F8-01A 4 0 5'UTR-CDS Intra-chr q13.2 Oncogene Transcription factor q13.2 Seq+ 54969 ChimerSeq STARFusion TCGA_RNA-Seq ZFP30-C19orf33 ZFP30 chr19 38134166 - C19orf33 chr19 38795015 + Exonic hg19 UCEC TCGA-AJ-A3BD-01A 35 155 In-Frame Intra-chr q13.12 Transcription factor q13.2 Seq+ 54970 ChimerSeq STARFusion TCGA_RNA-Seq C12orf10-ESPL1 C12orf10 chr12 53695509 + ESPL1 chr12 53686725 + Exonic hg19 UCEC TCGA-AJ-A3BD-01A 12 71 Out-of-frame Intra-chr q13.13 q13.13 Seq+ 54971 ChimerSeq STARFusion TCGA_RNA-Seq SUPT5H-ARHGEF19 SUPT5H chr19 39965358 + ARHGEF19 chr1 16525749 - Exonic hg19 UCEC TCGA-AJ-A3BD-01A 14 49 Out-of-frame Inter-chr q13.2 p36.13 Seq+ 54972 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-SPINK8 MAP4 chr3 47956307 - SPINK8 chr3 48351436 - Exonic hg19 UCEC TCGA-AJ-A3BD-01A 3 58 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 54973 ChimerSeq STARFusion TCGA_RNA-Seq PI4KB-ZNF687 PI4KB chr1 151265896 - ZNF687 chr1 151263677 + Exonic hg19 UCEC TCGA-AJ-A3BD-01A 16 3 Out-of-frame Intra-chr q21.3 q21.3 Transcription factor 54974 ChimerSeq STARFusion TCGA_RNA-Seq LRRFIP1-MLPH LRRFIP1 chr2 238601164 + MLPH chr2 238462209 + Exonic hg19 UCEC TCGA-AJ-A3BD-01A 5 46 In-Frame Intra-chr q37.3 q37.3 Seq+ 54975 ChimerSeq STARFusion TCGA_RNA-Seq LRRFIP1-MLPH LRRFIP1 chr2 238536383 + MLPH chr2 238462209 + Exonic hg19 UCEC TCGA-AJ-A3BD-01A 4 46 In-Frame Intra-chr q37.3 q37.3 Seq+ 54976 ChimerSeq STARFusion TCGA_RNA-Seq MYO1C-SMTNL2 MYO1C chr17 1381910 - SMTNL2 chr17 4510656 + Exonic hg19 UCEC TCGA-AJ-A3BD-01A 3 26 Out-of-frame Intra-chr p13.3 p13.2 Seq+ 54977 ChimerSeq STARFusion TCGA_RNA-Seq SNX29-TNFRSF17 SNX29 chr16 12121301 + TNFRSF17 chr16 12060052 + Exonic hg19 UCEC TCGA-AJ-A3BD-01A 2 6 In-Frame Intra-chr p13.13 p13.13 Seq+ 54978 ChimerSeq STARFusion TCGA_RNA-Seq RCN3-FLT3LG RCN3 chr19 50042436 + FLT3LG chr19 49989272 + Exonic hg19 UCEC TCGA-AJ-A3BD-01A 2 5 CDS-3'UTR Intra-chr q13.33 q13.33 Seq+ 54979 ChimerSeq STARFusion TCGA_RNA-Seq PRRG2-AGPAT2 PRRG2 chr19 50084738 + AGPAT2 chr9 139572008 - Exonic hg19 UCEC TCGA-AJ-A3BD-01A 2 3 5'UTR-CDS Inter-chr q13.33 q34.3 Seq+ 54980 ChimerSeq STARFusion TCGA_RNA-Seq PRRG2-AGPAT2 PRRG2 chr19 50086561 + AGPAT2 chr9 139572008 - Exonic hg19 UCEC TCGA-AJ-A3BD-01A 2 3 Out-of-frame Inter-chr q13.33 q34.3 Seq+ 54981 ChimerSeq STARFusion TCGA_RNA-Seq DDX39B-EHMT2 DDX39B chr6 31506540 - EHMT2 chr6 31860687 - Exonic hg19 UCEC TCGA-AJ-A3BD-01A 2 1 In-Frame Intra-chr 54982 ChimerSeq STARFusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57697534 + VMP1 chr17 57886157 + Exonic hg19 UCEC TCGA-EO-A22U-01A 2 4 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 54983 ChimerSeq STARFusion TCGA_RNA-Seq ACO1-ARL3 ACO1 chr9 32436395 + ARL3 chr10 104445758 - Exonic hg19 UCEC TCGA-D1-A175-01A 11 0 In-Frame Inter-chr p21.1 q24.32 Seq+ 54984 ChimerSeq STARFusion TCGA_RNA-Seq ARL3-ACO1 ARL3 chr10 104445573 - ACO1 chr9 32440463 + Exonic hg19 UCEC TCGA-D1-A175-01A 11 0 In-Frame Inter-chr q24.32 p21.1 54985 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G1-NCOR2 EIF4G1 chr3 184052769 + NCOR2 chr12 124824735 - Exonic hg19 UCEC TCGA-D1-A175-01A 6 0 Out-of-frame Inter-chr q27.1 q24.31 54986 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868873 - SLC44A4 chr6 31832843 - Exonic hg19 UCEC TCGA-AP-A0LT-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 54987 ChimerSeq STARFusion TCGA_RNA-Seq PPFIBP1-WNT7A PPFIBP1 chr12 27677298 + WNT7A chr3 13860920 - Exonic hg19 UCEC TCGA-EO-A3B1-01A 5 85 5'UTR-CDS Inter-chr p11.23 p25.1 Tumor suppressor gene Seq+ 54988 ChimerSeq STARFusion TCGA_RNA-Seq AACS-MAL AACS chr12 125561157 + MAL chr2 95713704 + Exonic hg19 UCEC TCGA-AX-A1C7-01A 25 46 Out-of-frame Inter-chr q24.31 q11.1 Tumor suppressor gene Seq+ 54989 ChimerSeq STARFusion TCGA_RNA-Seq KDM4A-PNKD KDM4A chr1 44160565 + PNKD chr2 219182678 + Exonic hg19 UCEC TCGA-AX-A1C7-01A 4 24 CDS-5'UTR Inter-chr p34.2 q35 54990 ChimerSeq STARFusion TCGA_RNA-Seq MYO9A-PKM MYO9A chr15 72410021 - PKM chr15 72511451 - Exonic hg19 UCEC TCGA-AX-A1C7-01A 3 1 Out-of-frame Intra-chr q23 q23 54991 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-INPP5A IGH@ chr14 106111040 - INPP5A chr10 134511407 + Exonic hg19 UCEC TCGA-BS-A0UF-01A 4 0 Out-of-frame Inter-chr 32.33 q26.3 54992 ChimerSeq STARFusion TCGA_RNA-Seq IGHG1-INPP5A IGHG1 chr14 106209321 - INPP5A chr10 134511407 + Exonic hg19 UCEC TCGA-BS-A0UF-01A 4 0 Out-of-frame Inter-chr q32.33 q26.3 54993 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-TYRO3 IGKC chr2 89156966 - TYRO3 chr15 41854865 + Exonic hg19 UCEC TCGA-BS-A0UF-01A 4 0 Out-of-frame Inter-chr p11.2 q15.1 TK:Axl 54994 ChimerSeq STARFusion TCGA_RNA-Seq ZNF790-ATP4A ZNF790 chr19 37340904 - ATP4A chr19 36044084 - Exonic hg19 UCEC TCGA-A5-A1OH-01A 37 96 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.12 Seq+ 54995 ChimerSeq STARFusion TCGA_RNA-Seq AGAP1-PACRG AGAP1 chr2 236792093 + PACRG chr6 163735859 + Exonic hg19 UCEC TCGA-A5-A1OH-01A 15 62 Out-of-frame Inter-chr q37.2 q26 Tumor suppressor gene Seq+ 54996 ChimerSeq STARFusion TCGA_RNA-Seq AGAP1-PACRG AGAP1 chr2 236792093 + PACRG chr6 163733811 + Exonic hg19 UCEC TCGA-A5-A1OH-01A 6 62 Out-of-frame Inter-chr q37.2 q26 Tumor suppressor gene Seq+ 54997 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D15-TRHDE TBC1D15 chr12 72300918 + TRHDE chr12 72680461 + Exonic hg19 UCEC TCGA-A5-A1OH-01A 13 26 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 54998 ChimerSeq STARFusion TCGA_RNA-Seq TSSC4-LSP1 TSSC4 chr11 2422028 + LSP1 chr11 1901317 + Exonic hg19 UCEC TCGA-A5-A1OH-01A 16 13 5'UTR-5'UTR Intra-chr p15.5 Tumor suppressor gene p15.5 Seq+ 54999 ChimerSeq STARFusion TCGA_RNA-Seq SNX19-RRP12 SNX19 chr11 130784161 - RRP12 chr10 99130553 - Exonic hg19 UCEC TCGA-A5-A1OH-01A 4 41 In-Frame Inter-chr q25 q24.1 Seq+ 55000 ChimerSeq STARFusion TCGA_RNA-Seq SNX19-RRP12 SNX19 chr11 130786175 - RRP12 chr10 99130553 - Exonic hg19 UCEC TCGA-A5-A1OH-01A 3 41 5'UTR-CDS Inter-chr q25 q24.1 Seq+ 55001 ChimerSeq STARFusion TCGA_RNA-Seq HMGA2-KALRN HMGA2 chr12 66345195 + KALRN chr3 124281690 + Exonic hg19 UCEC TCGA-A5-A1OH-01A 2 40 In-Frame Inter-chr q14.3 Transcription factor q21.1 Seq+ 55002 ChimerSeq STARFusion TCGA_RNA-Seq UBE2G1-ANKFY1 UBE2G1 chr17 4269566 - ANKFY1 chr17 4067467 - Exonic hg19 UCEC TCGA-A5-A1OH-01A 4 21 CDS-3'UTR Intra-chr p13.2 p13.2 Seq+ 55003 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-PITPNA YWHAE chr17 1303341 - PITPNA chr17 1461853 - Exonic hg19 UCEC TCGA-A5-A1OH-01A 3 19 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 55004 ChimerSeq STARFusion TCGA_RNA-Seq KALRN-CREB5 KALRN chr3 124352800 + CREB5 chr7 28527793 + Exonic hg19 UCEC TCGA-A5-A1OH-01A 4 12 In-Frame Inter-chr q21.1 p15.1 Transcription factor Seq+ 55005 ChimerSeq STARFusion TCGA_RNA-Seq SLC22A23-SMIM13 SLC22A23 chr6 3456140 - SMIM13 chr6 11134636 + Exonic hg19 UCEC TCGA-A5-A1OH-01A 2 13 Out-of-frame Intra-chr p25.2 p24.2 Seq+ 55006 ChimerSeq STARFusion TCGA_RNA-Seq ADD1-PCGF3 ADD1 chr4 2845751 + PCGF3 chr4 724419 + Exonic hg19 UCEC TCGA-A5-A1OH-01A 2 7 5'UTR-5'UTR Intra-chr p16.3 p16.3 Seq+ 55007 ChimerSeq STARFusion TCGA_RNA-Seq ADCY1-HNRNPA2B1 ADCY1 chr7 45650096 + HNRNPA2B1 chr7 26237352 - Exonic hg19 UCEC TCGA-A5-A1OH-01A 2 2 Out-of-frame Intra-chr p12.3 p15.2 Seq+ 55008 ChimerSeq STARFusion TCGA_RNA-Seq BICC1-LINC00844 BICC1 chr10 60580228 + LINC00844 chr10 60760989 + Exonic hg19 UCEC TCGA-A5-A1OH-01A 2 2 Out-of-frame Intra-chr q21.1 q21.1 55009 ChimerSeq STARFusion TCGA_RNA-Seq RYR2-ZP4 RYR2 chr1 237791380 + ZP4 chr1 238053476 - Exonic hg19 UCEC TCGA-A5-A1OH-01A 2 1 5'UTR-CDS Intra-chr q43 q43 55010 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 UCEC TCGA-BG-A0MQ-01A 3 0 Out-of-frame Inter-chr p13.13 q13.1 55011 ChimerSeq STARFusion TCGA_RNA-Seq PRPF8-MIR22HG PRPF8 chr17 1582383 - MIR22HG chr17 1615573 - Exonic hg19 UCEC TCGA-AP-A0LH-01A 13 0 Out-of-frame Intra-chr 55012 ChimerSeq STARFusion TCGA_RNA-Seq C16orf62-SYT17 C16orf62 chr16 19603196 + SYT17 chr16 19261263 + Exonic hg19 UCEC TCGA-AP-A0LH-01A 8 0 Out-of-frame Intra-chr p12.3 p12.3 55013 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P2 FTL chr19 49469056 + FTH1P2 chr1 228823167 + Exonic hg19 UCEC TCGA-AP-A0LH-01A 5 0 Out-of-frame Inter-chr q13.33 q42.13 55014 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469657 + FTH1P27 chrX 37364949 + Exonic hg19 UCEC TCGA-AP-A0LH-01A 4 0 Out-of-frame Inter-chr q13.33 p21.1 55015 ChimerSeq STARFusion TCGA_RNA-Seq VARS-GPANK1 VARS chr6 31746744 - GPANK1 chr6 31630487 - Exonic hg19 UCEC TCGA-EO-A3AZ-01A 3 1 Out-of-frame Intra-chr 55016 ChimerSeq STARFusion TCGA_RNA-Seq METRN-RAB40C METRN chr16 769339 + RAB40C chr16 678701 + Exonic hg19 UCEC TCGA-EO-A2CH-01A 20 0 Out-of-frame Intra-chr p13.3 p13.3 55017 ChimerSeq STARFusion TCGA_RNA-Seq METRN-RAB40C METRN chr16 768698 + RAB40C chr16 678818 + Exonic hg19 UCEC TCGA-EO-A2CH-01A 17 0 Out-of-frame Intra-chr p13.3 p13.3 55018 ChimerSeq STARFusion TCGA_RNA-Seq C16orf52-UQCRC2 C16orf52 chr16 22019728 + UQCRC2 chr16 21985217 + Exonic hg19 UCEC TCGA-EO-A2CH-01A 6 0 Out-of-frame Intra-chr 55019 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC10-RPL31P50 DNAJC10 chr2 183653145 + RPL31P50 chr12 31750085 - Exonic hg19 UCEC TCGA-EO-A2CH-01A 4 0 Out-of-frame Inter-chr q32.1 p11.21 55020 ChimerSeq STARFusion TCGA_RNA-Seq MTSS1L-EEFSEC MTSS1L chr16 70719626 - EEFSEC chr3 128060076 + Exonic hg19 UCEC TCGA-EO-A2CH-01A 4 0 In-Frame Inter-chr q22.1 q21.3 55021 ChimerSeq STARFusion TCGA_RNA-Seq GADD45GIP1-CSTF1 GADD45GIP1 chr19 13067677 - CSTF1 chr20 54978524 + Exonic hg19 UCEC TCGA-D1-A17K-01A 63 0 Out-of-frame Inter-chr p13.13 Tumor suppressor gene q13.2 Seq+ 55022 ChimerSeq STARFusion TCGA_RNA-Seq QRICH1-SHISA5 QRICH1 chr3 49094295 - SHISA5 chr3 48520666 - Exonic hg19 UCEC TCGA-D1-A17K-01A 11 0 Out-of-frame Intra-chr p21.31 p21.31 55023 ChimerSeq STARFusion TCGA_RNA-Seq FMNL2-GPBAR1 FMNL2 chr2 153437563 + GPBAR1 chr2 219127403 + Exonic hg19 UCEC TCGA-D1-A17K-01A 9 0 CDS-5'UTR Intra-chr q23.3 q35 Seq+ 55024 ChimerSeq STARFusion TCGA_RNA-Seq NSUN5-BCL7B NSUN5 chr7 72722428 - BCL7B chr7 72957974 - Exonic hg19 UCEC TCGA-D1-A17K-01A 6 0 In-Frame Intra-chr q11.23 q11.23 55025 ChimerSeq STARFusion TCGA_RNA-Seq NBAS-GAPDHP53 NBAS chr2 15331804 - GAPDHP53 chr20 24426019 + Exonic hg19 UCEC TCGA-D1-A17K-01A 4 0 Out-of-frame Inter-chr p24.3 p11.21 55026 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC10-RPL31P50 DNAJC10 chr2 183653145 + RPL31P50 chr12 31750085 - Exonic hg19 UCEC TCGA-BG-A0LW-01A 4 0 Out-of-frame Inter-chr q32.1 p11.21 55027 ChimerSeq STARFusion TCGA_RNA-Seq MYO9A-PARP6 MYO9A chr15 72410021 - PARP6 chr15 72535040 - Exonic hg19 UCEC TCGA-AX-A3G4-01A 29 156 5'UTR-CDS Intra-chr q23 q23 Seq+ 55028 ChimerSeq STARFusion TCGA_RNA-Seq TAX1BP1-GPX4 TAX1BP1 chr7 27779888 + GPX4 chr19 1105185 + Exonic hg19 UCEC TCGA-AX-A3G4-01A 7 52 5'UTR-CDS Inter-chr p15.2 p13.3 Seq+ 55029 ChimerSeq STARFusion TCGA_RNA-Seq FOCAD-CD2 FOCAD chr9 20823114 + CD2 chr1 117303024 + Exonic hg19 UCEC TCGA-AX-A3G4-01A 10 39 Out-of-frame Inter-chr p21.3 p13.1 Seq+ 55030 ChimerSeq STARFusion TCGA_RNA-Seq EP300-PAICS EP300 chr22 41513825 + PAICS chr4 57325538 + Exonic hg19 UCEC TCGA-AX-A3G4-01A 10 35 Out-of-frame Inter-chr q13.2 Oncogene q12 Seq+ 55031 ChimerSeq STARFusion TCGA_RNA-Seq FAM195B-P4HB FAM195B chr17 79791114 - P4HB chr17 79803867 - Exonic hg19 UCEC TCGA-AX-A3G4-01A 5 23 5'UTR-CDS Intra-chr q25.3 Seq+ 55032 ChimerSeq STARFusion TCGA_RNA-Seq USP36-TIMP2 USP36 chr17 76794990 - TIMP2 chr17 76853728 - Exonic hg19 UCEC TCGA-AX-A3G4-01A 3 22 Out-of-frame Intra-chr q25.3 q25.3 55033 ChimerSeq STARFusion TCGA_RNA-Seq USP36-TIMP2 USP36 chr17 76795749 - TIMP2 chr17 76853728 - Exonic hg19 UCEC TCGA-AX-A3G4-01A 2 22 In-Frame Intra-chr q25.3 q25.3 55034 ChimerSeq STARFusion TCGA_RNA-Seq CELSR2-KIAA1324 CELSR2 chr1 109805066 + KIAA1324 chr1 109704516 + Exonic hg19 UCEC TCGA-AX-A3G4-01A 4 13 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 55035 ChimerSeq STARFusion TCGA_RNA-Seq CTDSPL2-FBXO42 CTDSPL2 chr15 44719970 + FBXO42 chr1 16621412 - Exonic hg19 UCEC TCGA-AX-A3G4-01A 3 13 5'UTR-CDS Inter-chr q15.3 p36.13 Seq+ 55036 ChimerSeq STARFusion TCGA_RNA-Seq ZFX-EIF2S3 ZFX chrX 24167911 + EIF2S3 chrX 24089675 + Exonic hg19 UCEC TCGA-AX-A3G4-01A 4 3 5'UTR-CDS Intra-chr p22.11 Transcription factor p22.11 Seq+ 55037 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-SPEF2 NIPBL chr5 36877280 + SPEF2 chr5 35753726 + Exonic hg19 UCEC TCGA-AX-A3G4-01A 2 8 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 55038 ChimerSeq STARFusion TCGA_RNA-Seq PSMA5-EPS8L3 PSMA5 chr1 109968924 - EPS8L3 chr1 110293414 - Exonic hg19 UCEC TCGA-AX-A3G4-01A 3 1 In-Frame Intra-chr p13.3 p13.3 55039 ChimerSeq STARFusion TCGA_RNA-Seq RPTOR-FAHD2B RPTOR chr17 78599593 + FAHD2B chr2 97757449 - Exonic hg19 UCEC TCGA-AX-A3G4-01A 2 4 CDS-5'UTR Inter-chr q25.3 q11.2 Seq+ 55040 ChimerSeq STARFusion TCGA_RNA-Seq C20orf196-ORAOV1 C20orf196 chr20 5753689 + ORAOV1 chr11 69486587 - Exonic hg19 UCEC TCGA-AX-A3G4-01A 2 1 Out-of-frame Inter-chr p12.3 q13.3 Seq+ 55041 ChimerSeq STARFusion TCGA_RNA-Seq FTL-ZNF536 FTL chr19 49469662 + ZNF536 chr19 31039216 + Exonic hg19 UCEC TCGA-AX-A05Z-01A 8 0 Out-of-frame Intra-chr q13.33 q12 Transcription factor 55042 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 UCEC TCGA-AX-A05Z-01A 4 0 Out-of-frame Inter-chr p13.13 q13.1 55043 ChimerSeq STARFusion TCGA_RNA-Seq GPBP1-FOLR1 GPBP1 chr5 56472227 + FOLR1 chr11 71906315 + Exonic hg19 UCEC TCGA-EO-A2CG-01A 12 0 5'UTR-CDS Inter-chr q11.2 Transcription factor q13.4 Seq+ 55044 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-AP1M2 DNM2 chr19 10829079 + AP1M2 chr19 10694746 - Exonic hg19 UCEC TCGA-EO-A2CG-01A 6 0 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 55045 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-CDK12 ERBB2 chr17 37873733 + CDK12 chr17 37721013 + Exonic hg19 UCEC TCGA-EO-A2CG-01A 4 0 CDS-3'UTR Intra-chr q12 Oncogene q12 Oncogene Seq+ 55046 ChimerSeq STARFusion TCGA_RNA-Seq PACSIN2-TTLL1 PACSIN2 chr22 43411027 - TTLL1 chr22 43475992 - Exonic hg19 UCEC TCGA-EO-A2CG-01A 4 0 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 55047 ChimerSeq STARFusion TCGA_RNA-Seq CTNNB1-FGF12 CTNNB1 chr3 41241161 + FGF12 chr3 192078327 - Exonic hg19 UCEC TCGA-AJ-A2QK-01A 11 0 5'UTR-CDS Intra-chr p22.1 Oncogene q29 Seq+ 55048 ChimerSeq STARFusion TCGA_RNA-Seq USP7-CARHSP1 USP7 chr16 9057064 - CARHSP1 chr16 8953192 - Exonic hg19 UCEC TCGA-AJ-A2QK-01A 5 0 CDS-5'UTR Intra-chr p13.2 p13.2 55049 ChimerSeq STARFusion TCGA_RNA-Seq PIGR-STAG2 PIGR chr1 207101875 - STAG2 chrX 123094447 + Exonic hg19 UCEC TCGA-B5-A1MZ-01A 4 0 Out-of-frame Inter-chr q32.1 q25 Oncogene 55050 ChimerSeq STARFusion TCGA_RNA-Seq CASZ1-EXOSC10 CASZ1 chr1 10856621 - EXOSC10 chr1 11131030 - Exonic hg19 UCEC TCGA-AX-A3G6-01A 75 38 5'UTR-CDS Intra-chr p36.22 Transcription factor p36.22 Seq+ 55051 ChimerSeq STARFusion TCGA_RNA-Seq CCDC104-ACYP2 CCDC104 chr2 55761096 + ACYP2 chr2 54531825 + Exonic hg19 UCEC TCGA-AX-A3G6-01A 20 79 In-Frame Intra-chr p16.2 Seq+ 55052 ChimerSeq STARFusion TCGA_RNA-Seq CCDC104-ACYP2 CCDC104 chr2 55756128 + ACYP2 chr2 54531825 + Exonic hg19 UCEC TCGA-AX-A3G6-01A 4 79 Out-of-frame Intra-chr p16.2 Seq+ 55053 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT3-PDE9A AGPAT3 chr21 45323900 + PDE9A chr21 44106302 + Exonic hg19 UCEC TCGA-AX-A3G6-01A 5 25 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 55054 ChimerSeq STARFusion TCGA_RNA-Seq AGPAT3-PDE9A AGPAT3 chr21 45285226 + PDE9A chr21 44106302 + Exonic hg19 UCEC TCGA-AX-A3G6-01A 2 25 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 55055 ChimerSeq STARFusion TCGA_RNA-Seq LAPTM4B-MTDH LAPTM4B chr8 98837381 + MTDH chr8 98731277 + Exonic hg19 UCEC TCGA-AJ-A6NU-01A 29 73 In-Frame Intra-chr q22.1 q22.1 Seq+ 55056 ChimerSeq STARFusion TCGA_RNA-Seq ARPC1B-TRRAP ARPC1B chr7 98972404 + TRRAP chr7 98586388 + Exonic hg19 UCEC TCGA-AJ-A6NU-01A 20 31 5'UTR-CDS Intra-chr q22.1 q22.1 Atypical:PIKK Oncogene Seq+ 55057 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-CFTR PVT1 chr8 128806980 + CFTR chr7 117199518 + Exonic hg19 UCEC TCGA-AJ-A6NU-01A 6 74 5'UTR-CDS Inter-chr q24.21 q31.2 Tumor suppressor gene Seq+ 55058 ChimerSeq STARFusion TCGA_RNA-Seq USP34-KDM4B USP34 chr2 61697785 - KDM4B chr19 5119129 + Exonic hg19 UCEC TCGA-AJ-A6NU-01A 12 39 Out-of-frame Inter-chr p15 p13.3 Seq+ 55059 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-CFTR PVT1 chr8 128867565 + CFTR chr7 117199518 + Exonic hg19 UCEC TCGA-AJ-A6NU-01A 2 74 5'UTR-CDS Inter-chr q24.21 q31.2 Tumor suppressor gene Seq+ 55060 ChimerSeq STARFusion TCGA_RNA-Seq USP34-KDM4B USP34 chr2 61697785 - KDM4B chr19 5119664 + Exonic hg19 UCEC TCGA-AJ-A6NU-01A 4 39 Out-of-frame Inter-chr p15 p13.3 Seq+ 55061 ChimerSeq STARFusion TCGA_RNA-Seq ZNF618-KIAA0195 ZNF618 chr9 116638693 + KIAA0195 chr17 73467881 + Exonic hg19 UCEC TCGA-AJ-A6NU-01A 3 34 CDS-5'UTR Inter-chr q32 Transcription factor Seq+ 55062 ChimerSeq STARFusion TCGA_RNA-Seq NUDC-IGFN1 NUDC chr1 27250657 + IGFN1 chr1 201162375 + Exonic hg19 UCEC TCGA-AJ-A6NU-01A 4 26 CDS-5'UTR Intra-chr p36.11 q32.1 Seq+ 55063 ChimerSeq STARFusion TCGA_RNA-Seq UBE2L3-LLGL2 UBE2L3 chr22 21922060 + LLGL2 chr17 73539478 + Exonic hg19 UCEC TCGA-AJ-A6NU-01A 10 2 5'UTR-5'UTR Inter-chr q11.21 q25.1 Seq+ 55064 ChimerSeq STARFusion TCGA_RNA-Seq ANXA4-BCAR4 ANXA4 chr2 69969307 + BCAR4 chr16 11914154 - Exonic hg19 UCEC TCGA-AJ-A6NU-01A 5 17 5'UTR-3'UTR Inter-chr p13.3 p13.13 Seq+ 55065 ChimerSeq STARFusion TCGA_RNA-Seq TIMELESS-BAZ2A TIMELESS chr12 56843094 - BAZ2A chr12 56997484 - Exonic hg19 UCEC TCGA-AJ-A6NU-01A 4 21 5'UTR-CDS Intra-chr q13.3 q13.3 Transcription factor Seq+ 55066 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125718 - CXCL16 chr17 4637332 - Exonic hg19 UCEC TCGA-AJ-A6NU-01A 5 14 Out-of-frame Inter-chr q12.2 p13.2 55067 ChimerSeq STARFusion TCGA_RNA-Seq ANXA4-BCAR4 ANXA4 chr2 69969307 + BCAR4 chr16 11922248 - Exonic hg19 UCEC TCGA-AJ-A6NU-01A 4 17 5'UTR-3'UTR Inter-chr p13.3 p13.13 Seq+ 55068 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125699 - CXCL16 chr17 4637313 - Exonic hg19 UCEC TCGA-AJ-A6NU-01A 4 14 Out-of-frame Inter-chr q12.2 p13.2 55069 ChimerSeq STARFusion TCGA_RNA-Seq ANXA4-BCAR4 ANXA4 chr2 69969307 + BCAR4 chr16 11915612 - Exonic hg19 UCEC TCGA-AJ-A6NU-01A 2 17 5'UTR-3'UTR Inter-chr p13.3 p13.13 Seq+ 55070 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-RSL1D1 ZC3H7A chr16 11870176 - RSL1D1 chr16 11931970 - Exonic hg19 UCEC TCGA-AJ-A6NU-01A 2 3 In-Frame Intra-chr p13.13 p13.13 55071 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL1-IFI6 RN7SL1 chr14 50053529 + IFI6 chr1 27992764 - Exonic hg19 UCEC TCGA-EY-A1G8-01A 3 0 Out-of-frame Inter-chr q21.3 p35.3 55072 ChimerSeq STARFusion TCGA_RNA-Seq NPAS3-NUBPL NPAS3 chr14 33404209 + NUBPL chr14 32256986 + Exonic hg19 UCEC TCGA-EC-A1NJ-01A 7 0 5'UTR-5'UTR Intra-chr q13.1 Transcription factor q12 55073 ChimerSeq STARFusion TCGA_RNA-Seq PIK3CA-KCNMB3 PIK3CA chr3 178866391 + KCNMB3 chr3 178968722 - Exonic hg19 UCEC TCGA-D1-A15V-01A 13 0 5'UTR-CDS Intra-chr q26.32 Oncogene q26.32 Seq+ 55074 ChimerSeq STARFusion TCGA_RNA-Seq PIK3CA-KCNMB3 PIK3CA chr3 178866391 + KCNMB3 chr3 178968717 - Exonic hg19 UCEC TCGA-D1-A15V-01A 7 0 5'UTR-CDS Intra-chr q26.32 Oncogene q26.32 Seq+ 55075 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V1D-PLEK2 ATP6V1D chr14 67807157 - PLEK2 chr14 67859958 - Exonic hg19 UCEC TCGA-D1-A15V-01A 4 0 In-Frame Intra-chr q23.3 q24.1 55076 ChimerSeq STARFusion TCGA_RNA-Seq GGNBP2-NR1D1 GGNBP2 chr17 34941880 + NR1D1 chr17 38256519 - Exonic hg19 UCEC TCGA-BK-A26L-01C 5 17 CDS-5'UTR Intra-chr Tumor suppressor gene q21.1 Transcription factor Seq+ 55077 ChimerSeq STARFusion TCGA_RNA-Seq MYO19-SSH2 MYO19 chr17 34881059 - SSH2 chr17 28175947 - Exonic hg19 UCEC TCGA-BK-A26L-01C 4 15 Out-of-frame Intra-chr q12 q11.2 Seq+ 55078 ChimerSeq STARFusion TCGA_RNA-Seq MYO19-SSH2 MYO19 chr17 34881059 - SSH2 chr17 28120955 - Exonic hg19 UCEC TCGA-BK-A26L-01C 3 15 In-Frame Intra-chr q12 q11.2 Seq+ 55079 ChimerSeq STARFusion TCGA_RNA-Seq SRPK1-PXT1 SRPK1 chr6 35806114 - PXT1 chr6 36359651 - Exonic hg19 UCEC TCGA-BK-A26L-01C 5 7 Out-of-frame Intra-chr p21.31 CMGC:SRPK p21.31 Seq+ 55080 ChimerSeq STARFusion TCGA_RNA-Seq MED24-PSMD3 MED24 chr17 38209551 - PSMD3 chr17 38153583 + Exonic hg19 UCEC TCGA-BK-A26L-01C 2 13 In-Frame Intra-chr q21.1 q21.1 55081 ChimerSeq STARFusion TCGA_RNA-Seq GMEB1-EIF4G3 GMEB1 chr1 29023596 + EIF4G3 chr1 21167521 - Exonic hg19 UCEC TCGA-BK-A26L-01C 3 2 Out-of-frame Intra-chr p35.3 Transcription factor p36.12 55082 ChimerSeq STARFusion TCGA_RNA-Seq HIP1R-DENR HIP1R chr12 123320191 + DENR chr12 123238241 + Exonic hg19 UCEC TCGA-BK-A26L-01C 3 2 Out-of-frame Intra-chr q24.31 q24.31 55083 ChimerSeq STARFusion TCGA_RNA-Seq NLGN4X-DMD NLGN4X chrX 5947321 - DMD chrX 31792309 - Exonic hg19 UCEC TCGA-BK-A26L-01C 2 6 In-Frame Intra-chr p22.31 p21.1 Tumor suppressor gene Seq+ 55084 ChimerSeq STARFusion TCGA_RNA-Seq EFNA3-PCAT1 EFNA3 chr1 155036412 + PCAT1 chr8 128018800 + Exonic hg19 UCEC TCGA-B5-A1MU-01A 7 0 Out-of-frame Inter-chr q21.3 q24.21 55085 ChimerSeq STARFusion TCGA_RNA-Seq EFNA3-PCAT1 EFNA3 chr1 155036412 + PCAT1 chr8 128018800 + Exonic hg19 UCEC TCGA-B5-A1MU-01A 7 0 Out-of-frame Inter-chr q21.3 q24.21 55086 ChimerSeq STARFusion TCGA_RNA-Seq EFNA4-PCAT1 EFNA4 chr1 155036412 + PCAT1 chr8 128018800 + Exonic hg19 UCEC TCGA-B5-A1MU-01A 7 0 CDS-5'UTR Inter-chr q21.3 q24.21 55087 ChimerSeq STARFusion TCGA_RNA-Seq HEPHL1-PANX1 HEPHL1 chr11 93800911 + PANX1 chr11 93862496 + Exonic hg19 UCEC TCGA-B5-A1MU-01A 4 0 Out-of-frame Intra-chr q21 q21 55088 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC17-PPP1R14D DNAJC17 chr15 41099567 - PPP1R14D chr15 41108451 - Exonic hg19 UCEC TCGA-KP-A3W0-01A 7 33 In-Frame Intra-chr q15.1 q15.1 Seq+ 55089 ChimerSeq STARFusion TCGA_RNA-Seq RBM28-KMT2C RBM28 chr7 127970872 - KMT2C chr7 151882716 - Exonic hg19 UCEC TCGA-AX-A3FV-01A 7 90 Out-of-frame Intra-chr q32.1 q36.1 Oncogene Tumor suppressor gene Seq+ 55090 ChimerSeq STARFusion TCGA_RNA-Seq LYRM5-LRMP LYRM5 chr12 25356941 + LRMP chr12 25249844 + Exonic hg19 UCEC TCGA-AX-A3FV-01A 7 19 In-Frame Intra-chr p12.1 Tumor suppressor gene Seq+ 55091 ChimerSeq STARFusion TCGA_RNA-Seq PABPC1-ZFPM2 PABPC1 chr8 101733619 - ZFPM2 chr8 106431372 + Exonic hg19 UCEC TCGA-AX-A3FV-01A 7 16 In-Frame Intra-chr q22.3 q22.3 Transcription factor Seq+ 55092 ChimerSeq STARFusion TCGA_RNA-Seq WWP2-TANGO6 WWP2 chr16 69876023 + TANGO6 chr16 69056731 + Exonic hg19 UCEC TCGA-AX-A3FV-01A 4 10 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 55093 ChimerSeq STARFusion TCGA_RNA-Seq KCNJ12-PIK3CD KCNJ12 chr17 21321277 + PIK3CD chr1 9778813 + Exonic hg19 UCEC TCGA-AX-A3FV-01A 3 0 Out-of-frame Inter-chr p11.2 p36.22 Oncogene 55094 ChimerSeq STARFusion TCGA_RNA-Seq PTEN-LIPJ PTEN chr10 89685314 + LIPJ chr10 90347023 + Exonic hg19 UCEC TCGA-AX-A3FV-01A 2 2 CDS-5'UTR Intra-chr q23.31 Oncogene Tumor suppressor gene q23.31 KB Seq+ 55095 ChimerSeq STARFusion TCGA_RNA-Seq CCZ1-IGL@ CCZ1 chr7 5959116 + IGL@ chr22 23247168 + Exonic hg19 UCEC TCGA-EY-A1GC-01A 31 0 Out-of-frame Inter-chr p22.1 q11.22 55096 ChimerSeq STARFusion TCGA_RNA-Seq CCZ1-IGLJ3 CCZ1 chr7 5959116 + IGLJ3 chr22 23247168 + Exonic hg19 UCEC TCGA-EY-A1GC-01A 31 0 Out-of-frame Inter-chr p22.1 q11.22 55097 ChimerSeq STARFusion TCGA_RNA-Seq ST3GAL2-COG4 ST3GAL2 chr16 70415100 - COG4 chr16 70543924 - Exonic hg19 UCEC TCGA-EY-A1GC-01A 8 0 3'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 55098 ChimerSeq STARFusion TCGA_RNA-Seq BICD1-METTL20 BICD1 chr12 32459056 + METTL20 chr12 31814775 + Exonic hg19 UCEC TCGA-EY-A1GC-01A 6 0 CDS-5'UTR Intra-chr p11.21 Seq+ 55099 ChimerSeq STARFusion TCGA_RNA-Seq FBLN1-ATXN10 FBLN1 chr22 45914667 + ATXN10 chr22 46134611 + Exonic hg19 UCEC TCGA-EY-A1GC-01A 5 0 Out-of-frame Intra-chr q13.31 Tumor suppressor gene q13.31 55100 ChimerSeq STARFusion TCGA_RNA-Seq FBLN1-ATXN10 FBLN1 chr22 45931217 + ATXN10 chr22 46202839 + Exonic hg19 UCEC TCGA-EY-A1GC-01A 5 0 Out-of-frame Intra-chr q13.31 Tumor suppressor gene q13.31 55101 ChimerSeq STARFusion TCGA_RNA-Seq METTL12-IGL@ METTL12 chr11 62434372 + IGL@ chr22 23243491 + Exonic hg19 UCEC TCGA-EY-A1GC-01A 4 0 Out-of-frame Inter-chr q12.3 q11.22 55102 ChimerSeq STARFusion TCGA_RNA-Seq METTL12-IGLC2 METTL12 chr11 62434372 + IGLC2 chr22 23243491 + Exonic hg19 UCEC TCGA-EY-A1GC-01A 4 0 Out-of-frame Inter-chr q12.3 q11.22 55103 ChimerSeq STARFusion TCGA_RNA-Seq PSME3-BECN1 PSME3 chr17 40989714 + BECN1 chr17 40975897 - Exonic hg19 UCEC TCGA-EY-A1GC-01A 4 0 CDS-5'UTR Intra-chr q21.31 q21.31 Tumor suppressor gene Seq+ 55104 ChimerSeq STARFusion TCGA_RNA-Seq SVIL-IGH@ SVIL chr10 29840075 - IGH@ chr14 106330070 - Exonic hg19 UCEC TCGA-E6-A2P9-01A 4 1 Out-of-frame Inter-chr p11.23 32.33 55105 ChimerSeq STARFusion TCGA_RNA-Seq RSPRY1-MT4 RSPRY1 chr16 57220363 + MT4 chr16 56599005 + Exonic hg19 UCEC TCGA-AJ-A3I9-01A 181 781 5'UTR-5'UTR Intra-chr q13 q13 Seq+ 55106 ChimerSeq STARFusion TCGA_RNA-Seq RSPRY1-MT4 RSPRY1 chr16 57220697 + MT4 chr16 56599005 + Exonic hg19 UCEC TCGA-AJ-A3I9-01A 23 781 Out-of-frame Intra-chr q13 q13 Seq+ 55107 ChimerSeq STARFusion TCGA_RNA-Seq RSPRY1-MT4 RSPRY1 chr16 57220962 + MT4 chr16 56599005 + Exonic hg19 UCEC TCGA-AJ-A3I9-01A 21 781 Out-of-frame Intra-chr q13 q13 Seq+ 55108 ChimerSeq STARFusion TCGA_RNA-Seq ERBB3-COX4I2 ERBB3 chr12 56474166 + COX4I2 chr20 30231207 + Exonic hg19 UCEC TCGA-AJ-A3I9-01A 38 93 In-Frame Inter-chr q13.2 Oncogene q11.21 Seq+ 55109 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-DPY19L4 PVT1 chr8 128806980 + DPY19L4 chr8 95789894 + Exonic hg19 UCEC TCGA-AJ-A3I9-01A 17 84 5'UTR-CDS Intra-chr q24.21 q22.1 Seq+ 55110 ChimerSeq STARFusion TCGA_RNA-Seq ERBB3-COX4I2 ERBB3 chr12 56474166 + COX4I2 chr20 30232571 + Exonic hg19 UCEC TCGA-AJ-A3I9-01A 10 93 In-Frame Inter-chr q13.2 Oncogene q11.21 Seq+ 55111 ChimerSeq STARFusion TCGA_RNA-Seq KIF1B-SHISA4 KIF1B chr1 10292492 + SHISA4 chr1 201858573 + Exonic hg19 UCEC TCGA-AJ-A3I9-01A 11 55 In-Frame Intra-chr p36.22 Tumor suppressor gene q32.1 Seq+ 55112 ChimerSeq STARFusion TCGA_RNA-Seq POLD3-PPME1 POLD3 chr11 74324055 + PPME1 chr11 73914773 + Exonic hg19 UCEC TCGA-AJ-A3I9-01A 7 47 In-Frame Intra-chr q13.4 q13.4 Seq+ 55113 ChimerSeq STARFusion TCGA_RNA-Seq SGPP2-TEN1 SGPP2 chr2 223289540 + TEN1 chr17 73982268 + Exonic hg19 UCEC TCGA-AJ-A3I9-01A 13 15 CDS-5'UTR Inter-chr q36.1 q25.1 Seq+ 55114 ChimerSeq STARFusion TCGA_RNA-Seq NDUFAF6-MYC NDUFAF6 chr8 95908155 + MYC chr8 128750494 + Exonic hg19 UCEC TCGA-AJ-A3I9-01A 5 34 Out-of-frame Intra-chr q22.1 q24.21 Oncogene Transcription factor Seq+ 55115 ChimerSeq STARFusion TCGA_RNA-Seq COL14A1-DEPTOR COL14A1 chr8 121298209 + DEPTOR chr8 120977472 + Exonic hg19 UCEC TCGA-AJ-A3I9-01A 6 25 Out-of-frame Intra-chr q24.12 q24.12 Seq+ 55116 ChimerSeq STARFusion TCGA_RNA-Seq RAB11FIP3-NME4 RAB11FIP3 chr16 476720 + NME4 chr16 448990 + Exonic hg19 UCEC TCGA-AJ-A3I9-01A 6 21 Out-of-frame Intra-chr p13.3 55117 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-TRAPPC9 PTK2 chr8 142011224 - TRAPPC9 chr8 141034176 - Exonic hg19 UCEC TCGA-AJ-A3I9-01A 7 15 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 55118 ChimerSeq STARFusion TCGA_RNA-Seq CHP1-ARHGAP42 CHP1 chr15 41523647 + ARHGAP42 chr11 100830614 + Exonic hg19 UCEC TCGA-AJ-A3I9-01A 2 9 Out-of-frame Inter-chr q15.1 q22.1 Seq+ 55119 ChimerSeq STARFusion TCGA_RNA-Seq NAA25-HECTD4 NAA25 chr12 112477033 - HECTD4 chr12 112638602 - Exonic hg19 UCEC TCGA-AJ-A3I9-01A 3 2 Out-of-frame Intra-chr q24.13 q24.13 55120 ChimerSeq STARFusion TCGA_RNA-Seq WDR47-DECR2 WDR47 chr1 109544846 - DECR2 chr16 461890 + Exonic hg19 UCEC TCGA-AJ-A3I9-01A 2 6 CDS-3'UTR Inter-chr p13.3 Seq+ 55121 ChimerSeq STARFusion TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5446781 - RNF216 chr7 5681007 - Exonic hg19 UCEC TCGA-AX-A3FX-01A 12 65 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 55122 ChimerSeq STARFusion TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5463072 - RNF216 chr7 5681007 - Exonic hg19 UCEC TCGA-AX-A3FX-01A 6 65 5'UTR-CDS Intra-chr p22.1 p22.1 Seq+ 55123 ChimerSeq STARFusion TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5460691 - RNF216 chr7 5681007 - Exonic hg19 UCEC TCGA-AX-A3FX-01A 5 65 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 55124 ChimerSeq STARFusion TCGA_RNA-Seq ZNF516-MBP ZNF516 chr18 74202637 - MBP chr18 74702016 - Exonic hg19 UCEC TCGA-AX-A3FX-01A 8 50 5'UTR-CDS Intra-chr q23 Transcription factor q23 Seq+ 55125 ChimerSeq STARFusion TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5464922 - RNF216 chr7 5681007 - Exonic hg19 UCEC TCGA-AX-A3FX-01A 3 65 5'UTR-CDS Intra-chr p22.1 p22.1 Seq+ 55126 ChimerSeq STARFusion TCGA_RNA-Seq DENND1A-PSMB7 DENND1A chr9 126554866 - PSMB7 chr9 127146935 - Exonic hg19 UCEC TCGA-AX-A3FX-01A 8 40 Out-of-frame Intra-chr q33.3 q33.3 Seq+ 55127 ChimerSeq STARFusion TCGA_RNA-Seq ZNF516-MBP ZNF516 chr18 74174984 - MBP chr18 74702016 - Exonic hg19 UCEC TCGA-AX-A3FX-01A 3 50 5'UTR-CDS Intra-chr q23 Transcription factor q23 Seq+ 55128 ChimerSeq STARFusion TCGA_RNA-Seq CPSF3L-GNB1 CPSF3L chr1 1259961 - GNB1 chr1 1724750 - Exonic hg19 UCEC TCGA-AX-A3FX-01A 8 24 In-Frame Intra-chr p36.33 Seq+ 55129 ChimerSeq STARFusion TCGA_RNA-Seq TNIP1-ANXA6 TNIP1 chr5 150418658 - ANXA6 chr5 150497398 - Exonic hg19 UCEC TCGA-AX-A3FX-01A 5 18 Out-of-frame Intra-chr q33.1 q33.1 Seq+ 55130 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB7A-MAP2K2 ZBTB7A chr19 4053969 - MAP2K2 chr19 4095447 - Exonic hg19 UCEC TCGA-AX-A3FX-01A 2 15 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 STE:STE7 Oncogene Seq+ 55131 ChimerSeq STARFusion TCGA_RNA-Seq SUGP1-MEX3D SUGP1 chr19 19407798 - MEX3D chr19 1556922 - Exonic hg19 UCEC TCGA-AX-A3FX-01A 2 7 In-Frame Intra-chr p13.11 p13.3 Seq+ 55132 ChimerSeq STARFusion TCGA_RNA-Seq MBTPS1-CDH5 MBTPS1 chr16 84096910 - CDH5 chr16 66422227 + Exonic hg19 UCEC TCGA-AX-A3FX-01A 2 6 In-Frame Intra-chr q24.1 q21 Oncogene Tumor suppressor gene Seq+ 55133 ChimerSeq STARFusion TCGA_RNA-Seq MSI2-ENPP3 MSI2 chr17 55607085 + ENPP3 chr6 132043367 + Exonic hg19 UCEC TCGA-AX-A3FX-01A 2 2 In-Frame Inter-chr q22 q23.2 55134 ChimerSeq STARFusion TCGA_RNA-Seq FOXK2-BCAS3 FOXK2 chr17 80545148 + BCAS3 chr17 59445688 + Exonic hg19 UCEC TCGA-AX-A3FX-01A 2 1 In-Frame Intra-chr q25.3 Transcription factor q23.2 55135 ChimerSeq STARFusion TCGA_RNA-Seq LPIN2-MYOM1 LPIN2 chr18 3013085 - MYOM1 chr18 3102628 - Exonic hg19 UCEC TCGA-AX-A3FX-01A 2 1 5'UTR-CDS Intra-chr p11.31 p11.31 Seq+ 55136 ChimerSeq STARFusion TCGA_RNA-Seq FZR1-GNA11 FZR1 chr19 3534511 + GNA11 chr19 3113328 + Exonic hg19 UCEC TCGA-FI-A2D2-01A 18 0 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Oncogene Seq+ 55137 ChimerSeq STARFusion TCGA_RNA-Seq SORT1-SLC16A4 SORT1 chr1 109896989 - SLC16A4 chr1 110906515 - Exonic hg19 UCEC TCGA-FI-A2D2-01A 10 0 Out-of-frame Intra-chr p13.3 p13.3 55138 ChimerSeq STARFusion TCGA_RNA-Seq TLN2-POFUT1 TLN2 chr15 63097984 + POFUT1 chr20 30803072 + Exonic hg19 UCEC TCGA-FI-A2D2-01A 9 0 In-Frame Inter-chr q22.2 q11.21 55139 ChimerSeq STARFusion TCGA_RNA-Seq RAB20-CARS2 RAB20 chr13 111213695 - CARS2 chr13 111299586 - Exonic hg19 UCEC TCGA-FI-A2D2-01A 7 0 In-Frame Intra-chr q34 q34 Seq+ 55140 ChimerSeq STARFusion TCGA_RNA-Seq RERE-SLC2A5 RERE chr1 8716032 - SLC2A5 chr1 9101996 - Exonic hg19 UCEC TCGA-FI-A2D2-01A 7 0 In-Frame Intra-chr p36.23 p36.23 Seq+ 55141 ChimerSeq STARFusion TCGA_RNA-Seq KMT2C-DENND2A KMT2C chr7 152132711 - DENND2A chr7 140255513 - Exonic hg19 UCEC TCGA-FI-A2D2-01A 6 0 Out-of-frame Intra-chr q36.1 Oncogene Tumor suppressor gene q34 55142 ChimerSeq STARFusion TCGA_RNA-Seq TGIF2-FAM222B TGIF2 chr20 35207369 + FAM222B chr17 27093725 - Exonic hg19 UCEC TCGA-FI-A2D2-01A 6 0 CDS-5'UTR Inter-chr q11.23 Transcription factor q11.2 55143 ChimerSeq STARFusion TCGA_RNA-Seq NRBP2-FOXH1 NRBP2 chr8 144922138 - FOXH1 chr8 145699021 - Exonic hg19 UCEC TCGA-FI-A2D2-01A 4 0 Out-of-frame Intra-chr q24.3 Other:NRBP q24.3 Transcription factor 55144 ChimerSeq STARFusion TCGA_RNA-Seq RERE-SLC2A5 RERE chr1 8716032 - SLC2A5 chr1 9107793 - Exonic hg19 UCEC TCGA-FI-A2D2-01A 4 0 Out-of-frame Intra-chr p36.23 p36.23 Seq+ 55145 ChimerSeq STARFusion TCGA_RNA-Seq CTDSPL2-CKMT1A CTDSPL2 chr15 44719970 + CKMT1A chr15 43985112 + Exonic hg19 UCEC TCGA-A5-A7WK 127 229 5'UTR-5'UTR Intra-chr q15.3 q15.3 Seq+ 55146 ChimerSeq STARFusion TCGA_RNA-Seq CTDSPL2-CKMT1A CTDSPL2 chr15 44719970 + CKMT1A chr15 43885280 + Exonic hg19 UCEC TCGA-A5-A7WK 49 229 5'UTR-5'UTR Intra-chr q15.3 q15.3 Seq+ 55147 ChimerSeq STARFusion TCGA_RNA-Seq KMT2E-LHFPL3 KMT2E chr7 104654982 + LHFPL3 chr7 104546634 + Exonic hg19 UCEC TCGA-A5-A7WK 69 143 Out-of-frame Intra-chr q22.3 q22.2 55148 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2B-PRCD PRRC2B chr9 134358832 + PRCD chr17 74536587 + Exonic hg19 UCEC TCGA-A5-A7WK 71 116 Out-of-frame Inter-chr q34.13 q25.1 Seq+ 55149 ChimerSeq STARFusion TCGA_RNA-Seq RABL2A-IL36G RABL2A chr2 114390637 + IL36G chr2 113742417 + Exonic hg19 UCEC TCGA-A5-A7WK 43 121 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 55150 ChimerSeq STARFusion TCGA_RNA-Seq ZFP90-NUTF2 ZFP90 chr16 68573372 + NUTF2 chr16 67899005 + Exonic hg19 UCEC TCGA-A5-A7WK 25 152 5'UTR-5'UTR Intra-chr q22.1 Transcription factor q22.1 Seq+ 55151 ChimerSeq STARFusion TCGA_RNA-Seq ZFP90-NUTF2 ZFP90 chr16 68567758 + NUTF2 chr16 67899005 + Exonic hg19 UCEC TCGA-A5-A7WK 15 143 5'UTR-5'UTR Intra-chr q22.1 Transcription factor q22.1 Seq+ 55152 ChimerSeq STARFusion TCGA_RNA-Seq ZFP90-NUTF2 ZFP90 chr16 68573382 + NUTF2 chr16 67899005 + Exonic hg19 UCEC TCGA-A5-A7WK 4 143 5'UTR-5'UTR Intra-chr q22.1 Transcription factor q22.1 Seq+ 55153 ChimerSeq STARFusion TCGA_RNA-Seq MECOM-SLC7A14 MECOM chr3 169381124 - SLC7A14 chr3 170219134 - Exonic hg19 UCEC TCGA-A5-A7WK 27 48 In-Frame Intra-chr q26.2 Transcription factor q26.2 Seq+ 55154 ChimerSeq STARFusion TCGA_RNA-Seq ZFP90-NUTF2 ZFP90 chr16 68573343 + NUTF2 chr16 67899005 + Exonic hg19 UCEC TCGA-A5-A7WK 3 143 5'UTR-5'UTR Intra-chr q22.1 Transcription factor q22.1 Seq+ 55155 ChimerSeq STARFusion TCGA_RNA-Seq TNFAIP2-EXOC3L4 TNFAIP2 chr14 103600140 + EXOC3L4 chr14 103568455 + Exonic hg19 UCEC TCGA-A5-A7WK 12 92 Out-of-frame Intra-chr q32.32 q32.32 55156 ChimerSeq STARFusion TCGA_RNA-Seq LIMCH1-UCHL1 LIMCH1 chr4 41526495 + UCHL1 chr4 41258610 + Exonic hg19 UCEC TCGA-A5-A7WK 18 50 CDS-5'UTR Intra-chr p13 p13 Tumor suppressor gene Seq+ 55157 ChimerSeq STARFusion TCGA_RNA-Seq LUC7L-STXBP1 LUC7L chr16 256003 - STXBP1 chr9 130425484 + Exonic hg19 UCEC TCGA-A5-A7WK 13 62 In-Frame Inter-chr p13.3 q34.11 Seq+ 55158 ChimerSeq STARFusion TCGA_RNA-Seq PIP5K1B-PGM5 PIP5K1B chr9 71437599 + PGM5 chr9 71080009 + Exonic hg19 UCEC TCGA-A5-A7WK 16 49 Out-of-frame Intra-chr q21.11 q21.11 Seq+ 55159 ChimerSeq STARFusion TCGA_RNA-Seq DLGAP4-RGMA DLGAP4 chr20 35089913 + RGMA chr15 93595737 - Exonic hg19 UCEC TCGA-A5-A7WK 18 34 5'UTR-CDS Inter-chr q11.23 q26.1 Seq+ 55160 ChimerSeq STARFusion TCGA_RNA-Seq OCEL1-USE1 OCEL1 chr19 17338814 + USE1 chr19 17329173 + Exonic hg19 UCEC TCGA-A5-A7WK 4 64 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 55161 ChimerSeq STARFusion TCGA_RNA-Seq OCEL1-USE1 OCEL1 chr19 17337162 + USE1 chr19 17330440 + Exonic hg19 UCEC TCGA-A5-A7WK 4 64 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 55162 ChimerSeq STARFusion TCGA_RNA-Seq OCEL1-USE1 OCEL1 chr19 17337125 + USE1 chr19 17330022 + Exonic hg19 UCEC TCGA-A5-A7WK 3 64 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 55163 ChimerSeq STARFusion TCGA_RNA-Seq KDM2B-RHOF KDM2B chr12 121932382 - RHOF chr12 122231145 - Exonic hg19 UCEC TCGA-A5-A7WK 12 25 In-Frame Intra-chr q24.31 Transcription factor q24.31 Seq+ 55164 ChimerSeq STARFusion TCGA_RNA-Seq OCEL1-USE1 OCEL1 chr19 17338008 + USE1 chr19 17330440 + Exonic hg19 UCEC TCGA-A5-A7WK 2 64 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 55165 ChimerSeq STARFusion TCGA_RNA-Seq OCEL1-USE1 OCEL1 chr19 17338008 + USE1 chr19 17330022 + Exonic hg19 UCEC TCGA-A5-A7WK 2 64 In-Frame Intra-chr p13.11 p13.11 Seq+ 55166 ChimerSeq STARFusion TCGA_RNA-Seq NTN1-RANGAP1 NTN1 chr17 8926708 + RANGAP1 chr22 41664160 - Exonic hg19 UCEC TCGA-A5-A7WK 9 30 Out-of-frame Inter-chr p13.1 q13.2 Seq+ 55167 ChimerSeq STARFusion TCGA_RNA-Seq LGR6-GPR37L1 LGR6 chr1 202163329 + GPR37L1 chr1 202096869 + Exonic hg19 UCEC TCGA-A5-A7WK 9 24 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 55168 ChimerSeq STARFusion TCGA_RNA-Seq RARA-PLEKHA6 RARA chr17 38487648 + PLEKHA6 chr1 204243937 - Exonic hg19 UCEC TCGA-A5-A7WK 5 40 CDS-5'UTR Inter-chr q21.2 Oncogene Transcription factor q32.1 Seq+ 55169 ChimerSeq STARFusion TCGA_RNA-Seq DLGAP4-RGMA DLGAP4 chr20 35091002 + RGMA chr15 93595737 - Exonic hg19 UCEC TCGA-A5-A7WK 6 34 In-Frame Inter-chr q11.23 q26.1 Seq+ 55170 ChimerSeq STARFusion TCGA_RNA-Seq LIMCH1-UCHL1 LIMCH1 chr4 41496623 + UCHL1 chr4 41258610 + Exonic hg19 UCEC TCGA-A5-A7WK 2 50 CDS-5'UTR Intra-chr p13 p13 Tumor suppressor gene Seq+ 55171 ChimerSeq STARFusion TCGA_RNA-Seq DLGAP4-RGMA DLGAP4 chr20 35093770 + RGMA chr15 93595737 - Exonic hg19 UCEC TCGA-A5-A7WK 5 34 5'UTR-CDS Inter-chr q11.23 q26.1 Seq+ 55172 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1D-ASPSCR1 CSNK1D chr17 80231182 - ASPSCR1 chr17 79974817 + Exonic hg19 UCEC TCGA-A5-A7WK 4 34 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 55173 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-EXD3 ZFAND3 chr6 37897775 + EXD3 chr9 140248829 - Exonic hg19 UCEC TCGA-A5-A7WK 5 29 Out-of-frame Inter-chr p21.2 q34.3 Seq+ 55174 ChimerSeq STARFusion TCGA_RNA-Seq DDX39B-C6orf10 DDX39B chr6 31506540 - C6orf10 chr6 32337760 - Exonic hg19 UCEC TCGA-A5-A7WK 6 22 In-Frame Intra-chr Seq+ 55175 ChimerSeq STARFusion TCGA_RNA-Seq STXBP1-CACNA2D2 STXBP1 chr9 130425632 + CACNA2D2 chr3 50418557 - Exonic hg19 UCEC TCGA-A5-A7WK 8 10 Out-of-frame Inter-chr q34.11 p21.31 Seq+ 55176 ChimerSeq STARFusion TCGA_RNA-Seq MAP7D1-AGO3 MAP7D1 chr1 36639079 + AGO3 chr1 36469942 + Exonic hg19 UCEC TCGA-A5-A7WK 7 12 Out-of-frame Intra-chr p34.3 p34.3 Seq+ 55177 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-EXD3 ZFAND3 chr6 37897775 + EXD3 chr9 140249225 - Exonic hg19 UCEC TCGA-A5-A7WK 3 27 In-Frame Inter-chr p21.2 q34.3 Seq+ 55178 ChimerSeq STARFusion TCGA_RNA-Seq FAM174B-PHF20 FAM174B chr15 93198546 - PHF20 chr20 34430495 + Exonic hg19 UCEC TCGA-A5-A7WK 5 17 In-Frame Inter-chr q26.1 q11.22 Transcription factor Seq+ 55179 ChimerSeq STARFusion TCGA_RNA-Seq METTL24-SLC22A16 METTL24 chr6 110567335 - SLC22A16 chr6 110778220 - Exonic hg19 UCEC TCGA-A5-A7WK 5 17 Out-of-frame Intra-chr q21 q21 Seq+ 55180 ChimerSeq STARFusion TCGA_RNA-Seq FBLIM1-CELA2B FBLIM1 chr1 16084850 + CELA2B chr1 15802952 + Exonic hg19 UCEC TCGA-A5-A7WK 2 28 5'UTR-CDS Intra-chr p36.21 p36.21 Seq+ 55181 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-EXD3 ZFAND3 chr6 37787792 + EXD3 chr9 140248829 - Exonic hg19 UCEC TCGA-A5-A7WK 2 27 Out-of-frame Inter-chr p21.2 q34.3 Seq+ 55182 ChimerSeq STARFusion TCGA_RNA-Seq LGR6-GPR37L1 LGR6 chr1 202163329 + GPR37L1 chr1 202036710 + Exonic hg19 UCEC TCGA-A5-A7WK 3 22 CDS-5'UTR Intra-chr q32.1 q32.1 Seq+ 55183 ChimerSeq STARFusion TCGA_RNA-Seq KIF1A-C2orf54 KIF1A chr2 241697777 - C2orf54 chr2 241831180 - Exonic hg19 UCEC TCGA-A5-A7WK 4 15 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 55184 ChimerSeq STARFusion TCGA_RNA-Seq DNM1L-FGD4 DNM1L chr12 32886741 + FGD4 chr12 32772632 + Exonic hg19 UCEC TCGA-A5-A7WK 3 13 In-Frame Intra-chr p11.21 p11.21 Seq+ 55185 ChimerSeq STARFusion TCGA_RNA-Seq FAM102A-WDR34 FAM102A chr9 130742271 - WDR34 chr9 131403218 - Exonic hg19 UCEC TCGA-A5-A7WK 3 12 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 55186 ChimerSeq STARFusion TCGA_RNA-Seq PKD1-ZNF598 PKD1 chr16 2185476 - ZNF598 chr16 2049122 - Exonic hg19 UCEC TCGA-A5-A7WK 3 11 Out-of-frame Intra-chr p13.3 CAMK:PKD Tumor suppressor gene p13.3 Transcription factor Seq+ 55187 ChimerSeq STARFusion TCGA_RNA-Seq SFMBT1-EML1 SFMBT1 chr3 52988333 - EML1 chr14 100357536 + Exonic hg19 UCEC TCGA-A5-A7WK 3 11 Out-of-frame Inter-chr p21.1 q32.2 Seq+ 55188 ChimerSeq STARFusion TCGA_RNA-Seq CBWD1-NUP93 CBWD1 chr9 175698 - NUP93 chr16 56852576 + Exonic hg19 UCEC TCGA-A5-A7WK 3 9 Out-of-frame Inter-chr p24.3 q13 55189 ChimerSeq STARFusion TCGA_RNA-Seq STK38-GMDS STK38 chr6 36467650 - GMDS chr6 1742820 - Exonic hg19 UCEC TCGA-A5-A7WK 2 12 Out-of-frame Intra-chr p21.31 p25.3 Seq+ 55190 ChimerSeq STARFusion TCGA_RNA-Seq SFMBT1-EML1 SFMBT1 chr3 52988333 - EML1 chr14 100352210 + Exonic hg19 UCEC TCGA-A5-A7WK 2 11 Out-of-frame Inter-chr p21.1 q32.2 Seq+ 55191 ChimerSeq STARFusion TCGA_RNA-Seq ICK-FAM83B ICK chr6 52883128 - FAM83B chr6 54734985 + Exonic hg19 UCEC TCGA-A5-A7WK 2 9 CDS-5'UTR Intra-chr p12.1 CMGC:RCK Oncogene p12.1 Seq+ 55192 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31802768 + C2 chr6 31868874 + Exonic hg19 UCEC TCGA-BG-A0MI-01A 6 0 Out-of-frame Intra-chr p21.33 55193 ChimerSeq STARFusion TCGA_RNA-Seq AIF1L-RPL13AP7 AIF1L chr9 133995770 + RPL13AP7 chr21 26734505 + Exonic hg19 UCEC TCGA-BG-A0MI-01A 3 0 Out-of-frame Inter-chr q34.12 q21.2 55194 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1107-SAT1 KIAA1107 chr1 92633439 + SAT1 chrX 23803921 + Exonic hg19 UCEC TCGA-BG-A0MI-01A 3 0 Out-of-frame Inter-chr p22.1 p22.11 55195 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 UCEC TCGA-BG-A0MI-01A 3 0 Out-of-frame Inter-chr p13.13 q13.1 55196 ChimerSeq STARFusion TCGA_RNA-Seq NEDD9-GOLGB1 NEDD9 chr6 11213514 - GOLGB1 chr3 121388202 - Exonic hg19 UCEC TCGA-EY-A3QX-01A 108 212 In-Frame Inter-chr p24.2 q13.33 Seq+ 55197 ChimerSeq STARFusion TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983374 - RSRC2 chr12 122990253 - Exonic hg19 UCEC TCGA-EY-A3QX-01A 79 262 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 55198 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-HM13 TPX2 chr20 30330450 + HM13 chr20 30102284 + Exonic hg19 UCEC TCGA-EY-A3QX-01A 51 338 5'UTR-5'UTR Intra-chr q11.21 q11.21 Seq+ 55199 ChimerSeq STARFusion TCGA_RNA-Seq STARD3-GRB7 STARD3 chr17 37793484 + GRB7 chr17 37898505 + Exonic hg19 UCEC TCGA-EY-A3QX-01A 85 108 5'UTR-5'UTR Intra-chr q12 q12 Seq+ 55200 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-PVT1 ERBB2 chr17 37873733 + PVT1 chr8 129108764 + Exonic hg19 UCEC TCGA-EY-A3QX-01A 18 131 CDS-5'UTR Inter-chr q12 Oncogene q24.21 Seq+ 55201 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-PVT1 ERBB2 chr17 37876087 + PVT1 chr8 129108764 + Exonic hg19 UCEC TCGA-EY-A3QX-01A 16 131 CDS-5'UTR Inter-chr q12 Oncogene q24.21 Seq+ 55202 ChimerSeq STARFusion TCGA_RNA-Seq MAPK1-PRODH MAPK1 chr22 22221612 - PRODH chr22 18918711 - Exonic hg19 UCEC TCGA-EY-A3QX-01A 26 51 Out-of-frame Intra-chr q11.22 Oncogene q11.21 Tumor suppressor gene Seq+ 55203 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-PVT1 ERBB2 chr17 37876087 + PVT1 chr8 129082406 + Exonic hg19 UCEC TCGA-EY-A3QX-01A 4 131 CDS-5'UTR Inter-chr q12 Oncogene q24.21 Seq+ 55204 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-PVT1 ERBB2 chr17 37873733 + PVT1 chr8 129082406 + Exonic hg19 UCEC TCGA-EY-A3QX-01A 3 131 CDS-5'UTR Inter-chr q12 Oncogene q24.21 Seq+ 55205 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-PVT1 ERBB2 chr17 37873733 + PVT1 chr8 129108767 + Exonic hg19 UCEC TCGA-EY-A3QX-01A 2 131 CDS-5'UTR Inter-chr q12 Oncogene q24.21 Seq+ 55206 ChimerSeq STARFusion TCGA_RNA-Seq FOXK2-LONP2 FOXK2 chr17 80544076 + LONP2 chr16 48395388 + Exonic hg19 UCEC TCGA-EY-A3QX-01A 14 56 CDS-3'UTR Inter-chr q25.3 Transcription factor q12.1 Seq+ 55207 ChimerSeq STARFusion TCGA_RNA-Seq SF1-ZSWIM5 SF1 chr11 64543970 - ZSWIM5 chr1 45553909 - Exonic hg19 UCEC TCGA-EY-A3QX-01A 13 33 In-Frame Inter-chr q13.1 p34.1 Seq+ 55208 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC9-SLC45A4 TRAPPC9 chr8 141436714 - SLC45A4 chr8 142217424 - Exonic hg19 UCEC TCGA-EY-A3QX-01A 10 37 CDS-3'UTR Intra-chr q24.3 q24.3 Seq+ 55209 ChimerSeq STARFusion TCGA_RNA-Seq MYL6-SMARCC2 MYL6 chr12 56556115 + SMARCC2 chr12 56561978 - Exonic hg19 UCEC TCGA-EY-A3QX-01A 8 34 3'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 55210 ChimerSeq STARFusion TCGA_RNA-Seq LAMC2-NMNAT2 LAMC2 chr1 183155566 + NMNAT2 chr1 183262928 - Exonic hg19 UCEC TCGA-EY-A3QX-01A 8 25 In-Frame Intra-chr q25.3 q25.3 Seq+ 55211 ChimerSeq STARFusion TCGA_RNA-Seq SDF4-PPP1R2 SDF4 chr1 1153838 - PPP1R2 chr3 195256702 - Exonic hg19 UCEC TCGA-EY-A3QX-01A 5 35 Out-of-frame Inter-chr p36.33 q29 Seq+ 55212 ChimerSeq STARFusion TCGA_RNA-Seq ATP2B4-PRELP ATP2B4 chr1 203596347 + PRELP chr1 203452297 + Exonic hg19 UCEC TCGA-EY-A3QX-01A 5 17 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 55213 ChimerSeq STARFusion TCGA_RNA-Seq SYTL3-SNX9 SYTL3 chr6 159134910 + SNX9 chr6 158342563 + Exonic hg19 UCEC TCGA-EY-A3QX-01A 6 5 In-Frame Intra-chr q25.3 q25.3 Seq+ 55214 ChimerSeq STARFusion TCGA_RNA-Seq ARAP1-ARRB1 ARAP1 chr11 72413950 - ARRB1 chr11 75001083 - Exonic hg19 UCEC TCGA-EY-A3QX-01A 2 13 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 55215 ChimerSeq STARFusion TCGA_RNA-Seq TNS1-RNF25 TNS1 chr2 218771058 - RNF25 chr2 219533402 - Exonic hg19 UCEC TCGA-EY-A3QX-01A 4 5 5'UTR-CDS Intra-chr q35 q35 Seq+ 55216 ChimerSeq STARFusion TCGA_RNA-Seq ACAP2-UBE2J2 ACAP2 chr3 195101738 - UBE2J2 chr1 1203372 - Exonic hg19 UCEC TCGA-EY-A3QX-01A 3 8 CDS-5'UTR Inter-chr q29 p36.33 Seq+ 55217 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R1B-GRB7 PPP1R1B chr17 37791979 + GRB7 chr17 37898505 + Exonic hg19 UCEC TCGA-EY-A3QX-01A 2 2 In-Frame Intra-chr q12 Tumor suppressor gene q12 Seq+ 55218 ChimerSeq STARFusion TCGA_RNA-Seq ALDH2-HSPA1A ALDH2 chr12 112221083 + HSPA1A chr6 31785084 + Exonic hg19 UCEC TCGA-B5-A11S-01A 4 0 Out-of-frame Inter-chr q24.12 55219 ChimerSeq STARFusion TCGA_RNA-Seq CWC25-C17orf98 CWC25 chr17 36981419 - C17orf98 chr17 36991599 - Exonic hg19 UCEC TCGA-A5-A0G1-01A 8 0 Out-of-frame Intra-chr q12 q12 Seq+ 55220 ChimerSeq STARFusion TCGA_RNA-Seq GAPVD1-RABEPK GAPVD1 chr9 128024238 + RABEPK chr9 127965287 + Exonic hg19 UCEC TCGA-KP-A3W3-01A 7 26 5'UTR-5'UTR Intra-chr q33.3 q33.3 Seq+ 55221 ChimerSeq STARFusion TCGA_RNA-Seq GAPVD1-RABEPK GAPVD1 chr9 128031263 + RABEPK chr9 127965287 + Exonic hg19 UCEC TCGA-KP-A3W3-01A 3 26 5'UTR-5'UTR Intra-chr q33.3 q33.3 Seq+ 55222 ChimerSeq STARFusion TCGA_RNA-Seq SPCS3-VEGFC SPCS3 chr4 177241370 + VEGFC chr4 177650900 - Exonic hg19 UCEC TCGA-KP-A3W3-01A 2 2 Out-of-frame Intra-chr q34.2 q34.3 Seq+ 55223 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-CPD TAOK1 chr17 27718042 + CPD chr17 28747859 + Exonic hg19 UCEC TCGA-EY-A2OQ-01A 22 53 5'UTR-CDS Intra-chr q11.2 q11.2 Tumor suppressor gene Seq+ 55224 ChimerSeq STARFusion TCGA_RNA-Seq ATAD3B-HADHB ATAD3B chr1 1407469 + HADHB chr2 26486248 + Exonic hg19 UCEC TCGA-EY-A2OQ-01A 4 14 In-Frame Inter-chr p36.33 p23.3 Seq+ 55225 ChimerSeq STARFusion TCGA_RNA-Seq MYO9B-NEK8 MYO9B chr19 17186684 + NEK8 chr17 27067840 + Exonic hg19 UCEC TCGA-EY-A2OQ-01A 4 3 5'UTR-CDS Inter-chr p13.11 q11.2 Other:NEK Seq+ 55226 ChimerSeq STARFusion TCGA_RNA-Seq ANKS1A-PIGN ANKS1A chr6 34857376 + PIGN chr18 59713212 - Exonic hg19 UCEC TCGA-EY-A2OQ-01A 3 4 In-Frame Inter-chr p21.31 q21.33 Seq+ 55227 ChimerSeq STARFusion TCGA_RNA-Seq MYO9B-TRAF4 MYO9B chr19 17186684 + TRAF4 chr17 27074231 + Exonic hg19 UCEC TCGA-EY-A2OQ-01A 2 3 5'UTR-CDS Inter-chr p13.11 q11.2 55228 ChimerSeq STARFusion TCGA_RNA-Seq NDC80-HIF1A NDC80 chr18 2577356 + HIF1A chr14 62211423 + Exonic hg19 UCEC TCGA-EY-A2OQ-01A 2 0 Out-of-frame Inter-chr p11.32 q23.2 Oncogene Tumor suppressor gene Transcription factor 55229 ChimerSeq STARFusion TCGA_RNA-Seq GPR56-MT1F GPR56 chr16 57685294 + MT1F chr16 56692943 + Exonic hg19 UCEC TCGA-EO-A1Y8-01A 12 0 Out-of-frame Intra-chr q21 q13 Tumor suppressor gene 55230 ChimerSeq STARFusion TCGA_RNA-Seq GPR56-MT1F GPR56 chr16 57685288 + MT1F chr16 56692937 + Exonic hg19 UCEC TCGA-EO-A1Y8-01A 10 0 Out-of-frame Intra-chr q21 q13 Tumor suppressor gene 55231 ChimerSeq STARFusion TCGA_RNA-Seq LRWD1-CCDC107 LRWD1 chr7 102106717 + CCDC107 chr9 35658573 + Exonic hg19 UCEC TCGA-EO-A1Y8-01A 6 0 Out-of-frame Inter-chr q22.1 p13.3 55232 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-DHX30 MAP4 chr3 48040128 - DHX30 chr3 47859512 + Exonic hg19 UCEC TCGA-EO-A1Y8-01A 6 0 In-Frame Intra-chr p21.31 p21.31 Seq+ 55233 ChimerSeq STARFusion TCGA_RNA-Seq GPR56-MT1F GPR56 chr16 57684261 + MT1F chr16 56692983 + Exonic hg19 UCEC TCGA-EO-A1Y8-01A 5 0 Out-of-frame Intra-chr q21 q13 Tumor suppressor gene 55234 ChimerSeq STARFusion TCGA_RNA-Seq XPO7-ZNF707 XPO7 chr8 21777299 + ZNF707 chr8 144791423 + Exonic hg19 UCEC TCGA-EO-A1Y8-01A 5 0 CDS-3'UTR Intra-chr p21.3 Transcription factor 55235 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1E-DYNLRB1 CSNK1E chr22 38794443 - DYNLRB1 chr20 33114073 + Exonic hg19 UCEC TCGA-A5-A0R6-01A 20 0 5'UTR-CDS Inter-chr q13.1 q11.22 55236 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-NKAIN1 PUM1 chr1 31532051 - NKAIN1 chr1 31661034 - Exonic hg19 UCEC TCGA-A5-A0R6-01A 17 0 In-Frame Intra-chr p35.2 p35.2 Seq+ 55237 ChimerSeq STARFusion TCGA_RNA-Seq MACROD1-BAD MACROD1 chr11 63918711 - BAD chr11 64037809 - Exonic hg19 UCEC TCGA-A5-A0R6-01A 5 0 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 55238 ChimerSeq STARFusion TCGA_RNA-Seq MYLK-CCDC14 MYLK chr3 123401071 - CCDC14 chr3 123616460 - Exonic hg19 UCEC TCGA-A5-A0R6-01A 5 0 CDS-3'UTR Intra-chr q21.1 q21.1 Seq+ 55239 ChimerSeq STARFusion TCGA_RNA-Seq RHOF-USP42 RHOF chr12 122231058 - USP42 chr7 6154954 + Exonic hg19 UCEC TCGA-A5-A0R6-01A 3 0 In-Frame Inter-chr q24.31 p22.1 55240 ChimerSeq STARFusion TCGA_RNA-Seq CDS2-PCBP2 CDS2 chr20 5177910 + PCBP2 chr12 53873469 + Exonic hg19 UCEC TCGA-BS-A0TG-01A 3 0 Out-of-frame Inter-chr p12.3 q13.13 55241 ChimerSeq STARFusion TCGA_RNA-Seq RBM6-P4HA2 RBM6 chr3 49977658 + P4HA2 chr5 131554337 - Exonic hg19 UCEC TCGA-AX-A2H5-01A 9 0 5'UTR-5'UTR Inter-chr p21.31 Tumor suppressor gene q31.1 55242 ChimerSeq STARFusion TCGA_RNA-Seq GPATCH1-UPK1B GPATCH1 chr19 33588808 + UPK1B chr3 118922764 + Exonic hg19 UCEC TCGA-AX-A2H5-01A 5 0 Out-of-frame Inter-chr q13.11 q13.32 Seq+ 55243 ChimerSeq STARFusion TCGA_RNA-Seq RAB35-NCOR2 RAB35 chr12 120554403 - NCOR2 chr12 124922542 - Exonic hg19 UCEC TCGA-AX-A2H5-01A 4 0 Out-of-frame Intra-chr q24.23 q24.31 55244 ChimerSeq STARFusion TCGA_RNA-Seq RBM6-RHOT2 RBM6 chr3 50036946 + RHOT2 chr16 720123 + Exonic hg19 UCEC TCGA-AX-A2H5-01A 4 0 In-Frame Inter-chr p21.31 Tumor suppressor gene p13.3 55245 ChimerSeq STARFusion TCGA_RNA-Seq HIPK2-PARP12 HIPK2 chr7 139415731 - PARP12 chr7 139726148 - Exonic hg19 UCEC TCGA-A5-A2K4-01A 41 197 In-Frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Seq+ 55246 ChimerSeq STARFusion TCGA_RNA-Seq ZNF512-ANXA4 ZNF512 chr2 27806009 + ANXA4 chr2 70008652 + Exonic hg19 UCEC TCGA-A5-A2K4-01A 15 45 CDS-5'UTR Intra-chr p23.3 Transcription factor p13.3 Seq+ 55247 ChimerSeq STARFusion TCGA_RNA-Seq FBXO46-ARG2 FBXO46 chr19 46234107 - ARG2 chr14 68108903 + Exonic hg19 UCEC TCGA-A5-A2K4-01A 18 21 5'UTR-5'UTR Inter-chr q13.32 q24.1 Seq+ 55248 ChimerSeq STARFusion TCGA_RNA-Seq CELSR2-SARS CELSR2 chr1 109816292 + SARS chr1 109773500 + Exonic hg19 UCEC TCGA-A5-A2K4-01A 8 21 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 55249 ChimerSeq STARFusion TCGA_RNA-Seq ZNF512-ANXA4 ZNF512 chr2 27806583 + ANXA4 chr2 70008652 + Exonic hg19 UCEC TCGA-A5-A2K4-01A 2 45 CDS-5'UTR Intra-chr p23.3 Transcription factor p13.3 Seq+ 55250 ChimerSeq STARFusion TCGA_RNA-Seq FBXO46-ARG2 FBXO46 chr19 46226731 - ARG2 chr14 68108903 + Exonic hg19 UCEC TCGA-A5-A2K4-01A 7 21 5'UTR-5'UTR Inter-chr q13.32 q24.1 Seq+ 55251 ChimerSeq STARFusion TCGA_RNA-Seq COQ9-CCL17 COQ9 chr16 57486848 + CCL17 chr16 57448993 + Exonic hg19 UCEC TCGA-A5-A2K4-01A 6 23 Out-of-frame Intra-chr q21 q21 Seq+ 55252 ChimerSeq STARFusion TCGA_RNA-Seq SH3PXD2A-MAP1S SH3PXD2A chr10 105452786 - MAP1S chr19 17845082 + Exonic hg19 UCEC TCGA-A5-A2K4-01A 6 23 Out-of-frame Inter-chr q24.33 p13.11 Seq+ 55253 ChimerSeq STARFusion TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5463072 - RNF216 chr7 5681007 - Exonic hg19 UCEC TCGA-A5-A2K4-01A 5 27 5'UTR-CDS Intra-chr p22.1 p22.1 Seq+ 55254 ChimerSeq STARFusion TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5460691 - RNF216 chr7 5681007 - Exonic hg19 UCEC TCGA-A5-A2K4-01A 5 27 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 55255 ChimerSeq STARFusion TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5446781 - RNF216 chr7 5681007 - Exonic hg19 UCEC TCGA-A5-A2K4-01A 3 27 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 55256 ChimerSeq STARFusion TCGA_RNA-Seq TRMT11-NCOA7 TRMT11 chr6 126307768 + NCOA7 chr6 126249320 + Exonic hg19 UCEC TCGA-A5-A2K4-01A 3 13 In-Frame Intra-chr q22.32 q22.31 Seq+ 55257 ChimerSeq STARFusion TCGA_RNA-Seq CHD7-EMID1 CHD7 chr8 61714152 + EMID1 chr22 29610915 + Exonic hg19 UCEC TCGA-A5-A2K4-01A 4 7 Out-of-frame Inter-chr q12.2 q12.2 Seq+ 55258 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125718 - CXCL16 chr17 4637332 - Exonic hg19 UCEC TCGA-A5-A2K4-01A 3 8 Out-of-frame Inter-chr q12.2 p13.2 55259 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND3-ATF6B ZFAND3 chr6 37897775 + ATF6B chr6 32095527 - Exonic hg19 UCEC TCGA-A5-A2K4-01A 2 2 In-Frame Intra-chr p21.2 Transcription factor 55260 ChimerSeq STARFusion TCGA_RNA-Seq C7orf41-ZNRF2 C7orf41 chr7 30174914 + ZNRF2 chr7 30363258 + Exonic hg19 UCEC TCGA-EY-A1GL-01A 2 1 Out-of-frame Intra-chr p14.3 55261 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-ZNF536 IGKC chr2 89156859 - ZNF536 chr19 31039222 + Exonic hg19 UCEC TCGA-D1-A1O8-01A 11 0 Out-of-frame Inter-chr p11.2 q12 Transcription factor 55262 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL1-IFI6 RN7SL1 chr14 50053530 + IFI6 chr1 27992763 - Exonic hg19 UCEC TCGA-D1-A1O8-01A 11 0 Out-of-frame Inter-chr q21.3 p35.3 55263 ChimerSeq STARFusion TCGA_RNA-Seq AKAP13-IGH@ AKAP13 chr15 86163388 + IGH@ chr14 106208720 - Exonic hg19 UCEC TCGA-D1-A1O8-01A 9 0 Out-of-frame Inter-chr q25.3 32.33 55264 ChimerSeq STARFusion TCGA_RNA-Seq AKAP13-IGHG1 AKAP13 chr15 86163388 + IGHG1 chr14 106208720 - Exonic hg19 UCEC TCGA-D1-A1O8-01A 9 0 Out-of-frame Inter-chr q25.3 q32.33 55265 ChimerSeq STARFusion TCGA_RNA-Seq AKAP13-IGH@ AKAP13 chr15 86163388 + IGH@ chr14 106236672 - Exonic hg19 UCEC TCGA-D1-A1O8-01A 7 0 Out-of-frame Inter-chr q25.3 32.33 55266 ChimerSeq STARFusion TCGA_RNA-Seq CALML3-TYRO3 CALML3 chr10 5567458 + TYRO3 chr15 41854863 + Exonic hg19 UCEC TCGA-D1-A1O8-01A 5 0 Out-of-frame Inter-chr p15.1 q15.1 TK:Axl 55267 ChimerSeq STARFusion TCGA_RNA-Seq SFN-GPR56 SFN chr1 27189844 + GPR56 chr16 57698566 + Exonic hg19 UCEC TCGA-D1-A1O8-01A 5 0 Out-of-frame Inter-chr p36.11 Tumor suppressor gene q21 55268 ChimerSeq STARFusion TCGA_RNA-Seq IFI6-ZNF536 IFI6 chr1 27992626 - ZNF536 chr19 31039222 + Exonic hg19 UCEC TCGA-D1-A1O8-01A 4 0 Out-of-frame Inter-chr p35.3 q12 Transcription factor 55269 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1107-SAT1 KIAA1107 chr1 92633439 + SAT1 chrX 23803921 + Exonic hg19 UCEC TCGA-D1-A1O8-01A 4 0 Out-of-frame Inter-chr p22.1 p22.11 55270 ChimerSeq STARFusion TCGA_RNA-Seq RLBP1-IFITM1 RLBP1 chr15 89754987 - IFITM1 chr11 314942 + Exonic hg19 UCEC TCGA-D1-A1O8-01A 4 0 Out-of-frame Inter-chr q26.1 p15.5 Oncogene 55271 ChimerSeq STARFusion TCGA_RNA-Seq RLBP1-IFITM2 RLBP1 chr15 89754987 - IFITM2 chr11 309033 + Exonic hg19 UCEC TCGA-D1-A1O8-01A 4 0 Out-of-frame Inter-chr q26.1 p15.5 55272 ChimerSeq STARFusion TCGA_RNA-Seq HIPK2-PARP12 HIPK2 chr7 139415731 - PARP12 chr7 139728488 - Exonic hg19 UCEC TCGA-KP-A3W4-01A 37 265 In-Frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Seq+ 55273 ChimerSeq STARFusion TCGA_RNA-Seq HIPK2-PARP12 HIPK2 chr7 139415731 - PARP12 chr7 139726148 - Exonic hg19 UCEC TCGA-KP-A3W4-01A 29 265 In-Frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Seq+ 55274 ChimerSeq STARFusion TCGA_RNA-Seq HIPK2-PARP12 HIPK2 chr7 139415731 - PARP12 chr7 139727206 - Exonic hg19 UCEC TCGA-KP-A3W4-01A 4 265 Out-of-frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Seq+ 55275 ChimerSeq STARFusion TCGA_RNA-Seq ERGIC1-MIEN1 ERGIC1 chr5 172339959 + MIEN1 chr17 37886485 - Exonic hg19 UCEC TCGA-KP-A3W4-01A 23 30 Out-of-frame Inter-chr q35.1 q12 Seq+ 55276 ChimerSeq STARFusion TCGA_RNA-Seq UPF3A-CDC16 UPF3A chr13 115048418 + CDC16 chr13 115007596 + Exonic hg19 UCEC TCGA-KP-A3W4-01A 6 50 Out-of-frame Intra-chr q34 q34 Seq+ 55277 ChimerSeq STARFusion TCGA_RNA-Seq MOB3C-EFCAB14 MOB3C chr1 47082383 - EFCAB14 chr1 47182115 - Exonic hg19 UCEC TCGA-KP-A3W4-01A 5 23 Out-of-frame Intra-chr p33 p33 Seq+ 55278 ChimerSeq STARFusion TCGA_RNA-Seq MKNK1-EFCAB14 MKNK1 chr1 47082383 - EFCAB14 chr1 47182115 - Exonic hg19 UCEC TCGA-KP-A3W4-01A 5 20 Out-of-frame Intra-chr p33 p33 Seq+ 55279 ChimerSeq STARFusion TCGA_RNA-Seq CACUL1-IL1RN CACUL1 chr10 120513908 - IL1RN chr2 113885266 + Exonic hg19 UCEC TCGA-KP-A3W4-01A 2 9 Out-of-frame Inter-chr q26.11 q14.1 Seq+ 55280 ChimerSeq STARFusion TCGA_RNA-Seq EIF2S2-SKAP1 EIF2S2 chr20 32691268 - SKAP1 chr17 46266862 - Exonic hg19 UCEC TCGA-KP-A3W4-01A 2 4 Out-of-frame Inter-chr q11.22 q21.32 Seq+ 55281 ChimerSeq STARFusion TCGA_RNA-Seq PAPLN-PSEN1 PAPLN chr14 73732215 + PSEN1 chr14 73653561 + Exonic hg19 UCEC TCGA-KP-A3W4-01A 2 3 Out-of-frame Intra-chr q24.2 q24.2 55282 ChimerSeq STARFusion TCGA_RNA-Seq PITPNC1-TGS1 PITPNC1 chr17 65374318 + TGS1 chr8 56737140 + Exonic hg19 UCEC TCGA-KP-A3W4-01A 2 2 In-Frame Inter-chr q24.2 q12.1 Tumor suppressor gene 55283 ChimerSeq STARFusion TCGA_RNA-Seq ITCH-RALY ITCH chr20 32951155 + RALY chr20 32619328 + Exonic hg19 UCEC TCGA-D1-A16I-01A 24 0 5'UTR-5'UTR Intra-chr q11.22 q11.22 Seq+ 55284 ChimerSeq STARFusion TCGA_RNA-Seq UNK-MYO15B UNK chr17 73781065 + MYO15B chr17 73620851 + Exonic hg19 UCEC TCGA-D1-A16I-01A 19 0 5'UTR-5'UTR Intra-chr q25.1 q25.1 55285 ChimerSeq STARFusion TCGA_RNA-Seq UNK-MYO15B UNK chr17 73781065 + MYO15B chr17 73621203 + Exonic hg19 UCEC TCGA-D1-A16I-01A 12 0 5'UTR-5'UTR Intra-chr q25.1 q25.1 55286 ChimerSeq STARFusion TCGA_RNA-Seq CASZ1-EXOSC10 CASZ1 chr1 10702916 - EXOSC10 chr1 11126805 - Exonic hg19 UCEC TCGA-D1-A16I-01A 10 0 Out-of-frame Intra-chr p36.22 Transcription factor p36.22 Seq+ 55287 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1D-POLR2E CSNK1D chr17 80223562 - POLR2E chr19 1090144 - Exonic hg19 UCEC TCGA-D1-A16I-01A 10 0 Out-of-frame Inter-chr q25.3 p13.3 Seq+ 55288 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1D-POLR2E CSNK1D chr17 80223562 - POLR2E chr19 1090987 - Exonic hg19 UCEC TCGA-D1-A16I-01A 8 0 Out-of-frame Inter-chr q25.3 p13.3 Seq+ 55289 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1D-POLR2E CSNK1D chr17 80223562 - POLR2E chr19 1089550 - Exonic hg19 UCEC TCGA-D1-A16I-01A 6 0 Out-of-frame Inter-chr q25.3 p13.3 Seq+ 55290 ChimerSeq STARFusion TCGA_RNA-Seq SLC16A3-DUS1L SLC16A3 chr17 80186982 + DUS1L chr17 80022945 - Exonic hg19 UCEC TCGA-D1-A16I-01A 5 0 5'UTR-5'UTR Intra-chr q25.3 q25.3 Seq+ 55291 ChimerSeq STARFusion TCGA_RNA-Seq BAIAP2-LRP5 BAIAP2 chr17 79031767 + LRP5 chr11 68181157 + Exonic hg19 UCEC TCGA-D1-A16I-01A 4 0 In-Frame Inter-chr q25.3 q13.2 55292 ChimerSeq STARFusion TCGA_RNA-Seq TEAD4-ARL8A TEAD4 chr12 3069206 + ARL8A chr1 202107576 - Exonic hg19 UCEC TCGA-D1-A16I-01A 4 0 5'UTR-CDS Inter-chr p13.33 Transcription factor q32.1 Seq+ 55293 ChimerSeq STARFusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992064 + VMP1 chr17 57851115 + Exonic hg19 UCEC TCGA-EY-A1GS-01A 18 0 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 55294 ChimerSeq STARFusion TCGA_RNA-Seq SUV420H1-C11orf24 SUV420H1 chr11 67947599 - C11orf24 chr11 68029193 - Exonic hg19 UCEC TCGA-EY-A1GS-01A 11 0 Out-of-frame Intra-chr q13.2 Seq+ 55295 ChimerSeq STARFusion TCGA_RNA-Seq GDPD5-WNT11 GDPD5 chr11 75153408 - WNT11 chr11 75905888 - Exonic hg19 UCEC TCGA-EY-A1GS-01A 6 0 Out-of-frame Intra-chr q13.5 q13.5 Tumor suppressor gene Seq+ 55296 ChimerSeq STARFusion TCGA_RNA-Seq BLNK-PROSC BLNK chr10 98031109 - PROSC chr8 37623044 + Exonic hg19 UCEC TCGA-AX-A05S-01A 2 0 Out-of-frame Inter-chr q24.1 Oncogene Tumor suppressor gene 55297 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-C19orf53 ZSWIM4 chr19 13910735 + C19orf53 chr19 13888866 + Exonic hg19 UCEC TCGA-DF-A2KN-01A 5 21 Out-of-frame Intra-chr p13.13 p13.13 55298 ChimerSeq STARFusion TCGA_RNA-Seq SUGT1P3-ELF1 SUGT1P3 chr13 41495755 - ELF1 chr13 41525572 - Exonic hg19 UCEC TCGA-DF-A2KN-01A 3 6 3'UTR-CDS Intra-chr q14.11 q14.11 Transcription factor Seq+ 55299 ChimerSeq STARFusion TCGA_RNA-Seq TPTE2P5-ELF1 TPTE2P5 chr13 41495755 - ELF1 chr13 41525572 - Exonic hg19 UCEC TCGA-DF-A2KN-01A 3 4 Out-of-frame Intra-chr q14.11 q14.11 Transcription factor 55300 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31831073 - Exonic hg19 UCEC TCGA-D1-A16F-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 55301 ChimerSeq STARFusion TCGA_RNA-Seq SSU72-ASCC1 SSU72 chr1 1509858 - ASCC1 chr10 73887925 - Exonic hg19 UCEC TCGA-EY-A1GR-01A 30 0 Out-of-frame Inter-chr p36.33 q22.1 Seq+ 55302 ChimerSeq STARFusion TCGA_RNA-Seq PPP3R1-C1D PPP3R1 chr2 68444224 - C1D chr2 68274451 - Exonic hg19 UCEC TCGA-EY-A1GR-01A 12 0 CDS-5'UTR Intra-chr p14 p14 Seq+ 55303 ChimerSeq STARFusion TCGA_RNA-Seq ASXL1-TM9SF4 ASXL1 chr20 30956926 + TM9SF4 chr20 30737437 + Exonic hg19 UCEC TCGA-EY-A1GR-01A 6 0 In-Frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 55304 ChimerSeq STARFusion TCGA_RNA-Seq CTC1-NF2 CTC1 chr17 8135044 - NF2 chr22 30079704 + Exonic hg19 UCEC TCGA-EY-A1GR-01A 6 0 3'UTR-3'UTR Inter-chr p13.1 q12.2 Oncogene Tumor suppressor gene 55305 ChimerSeq STARFusion TCGA_RNA-Seq ISG15-IFITM1 ISG15 chr1 949543 + IFITM1 chr11 314961 + Exonic hg19 UCEC TCGA-EY-A1GR-01A 6 0 Out-of-frame Inter-chr p36.33 Tumor suppressor gene p15.5 Oncogene 55306 ChimerSeq STARFusion TCGA_RNA-Seq ISG15-IFITM2 ISG15 chr1 949543 + IFITM2 chr11 314961 + Exonic hg19 UCEC TCGA-EY-A1GR-01A 6 0 Out-of-frame Inter-chr p36.33 Tumor suppressor gene p15.5 55307 ChimerSeq STARFusion TCGA_RNA-Seq PHLDB3-XRCC1 PHLDB3 chr19 44005886 - XRCC1 chr19 44065172 - Exonic hg19 UCEC TCGA-EY-A1GR-01A 5 0 In-Frame Intra-chr q13.31 q13.31 55308 ChimerSeq STARFusion TCGA_RNA-Seq SSU72-ASCC1 SSU72 chr1 1509858 - ASCC1 chr10 73857208 - Exonic hg19 UCEC TCGA-EY-A1GR-01A 5 0 Out-of-frame Inter-chr p36.33 q22.1 Seq+ 55309 ChimerSeq STARFusion TCGA_RNA-Seq CREBL2-APOLD1 CREBL2 chr12 12765121 + APOLD1 chr12 12974142 + Exonic hg19 UCEC TCGA-EY-A1GR-01A 4 0 CDS-3'UTR Intra-chr p13.1 Transcription factor p13.1 55310 ChimerSeq STARFusion TCGA_RNA-Seq CREBL2-DDX47 CREBL2 chr12 12765121 + DDX47 chr12 12974142 + Exonic hg19 UCEC TCGA-EY-A1GR-01A 4 0 Out-of-frame Intra-chr p13.1 Transcription factor p13.1 55311 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD6-PSAP ANKRD6 chr6 90272273 + PSAP chr10 73580042 - Exonic hg19 UCEC TCGA-AJ-A2QL-01A 3 0 Out-of-frame Inter-chr q15 q22.1 55312 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-HM13 TPX2 chr20 30330450 + HM13 chr20 30154013 + Exonic hg19 UCEC TCGA-B5-A3FH-01A 11 131 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 55313 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-HM13 TPX2 chr20 30330450 + HM13 chr20 30156923 + Exonic hg19 UCEC TCGA-B5-A3FH-01A 3 131 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 55314 ChimerSeq STARFusion TCGA_RNA-Seq CHIC1-CDX4 CHIC1 chrX 72804408 + CDX4 chrX 72673353 + Exonic hg19 UCEC TCGA-B5-A3FH-01A 7 72 Out-of-frame Intra-chr q13.2 q13.2 Transcription factor Seq+ 55315 ChimerSeq STARFusion TCGA_RNA-Seq PIGU-C20orf85 PIGU chr20 33244984 - C20orf85 chr20 56728600 + Exonic hg19 UCEC TCGA-B5-A3FH-01A 3 8 Out-of-frame Intra-chr q11.22 q13.32 Seq+ 55316 ChimerSeq STARFusion TCGA_RNA-Seq FTL-FTH1P27 FTL chr19 49469662 + FTH1P27 chrX 37364954 + Exonic hg19 UCEC TCGA-D1-A16V-01A 5 0 Out-of-frame Inter-chr q13.33 p21.1 55317 ChimerSeq STARFusion TCGA_RNA-Seq MYO5B-COX6C MYO5B chr18 47500720 - COX6C chr8 100904280 - Exonic hg19 UCEC TCGA-DI-A2QY-01A 9 60 CDS-5'UTR Inter-chr q21.1 q22.2 Seq+ 55318 ChimerSeq STARFusion TCGA_RNA-Seq NEMF-POLE2 NEMF chr14 50269171 - POLE2 chr14 50114078 - Exonic hg19 UCEC TCGA-DI-A2QY-01A 4 43 Out-of-frame Intra-chr q21.3 q21.3 55319 ChimerSeq STARFusion TCGA_RNA-Seq S100A16-RPL14 S100A16 chr1 153579629 - RPL14 chr3 40503533 + Exonic hg19 UCEC TCGA-D1-A167-01A 4 0 Out-of-frame Inter-chr q21.3 p22.1 55320 ChimerSeq STARFusion TCGA_RNA-Seq DAAM2-COX5B DAAM2 chr6 39816363 + COX5B chr2 98264525 + Exonic hg19 UCEC TCGA-BG-A0M7-01A 3 0 Out-of-frame Inter-chr p21.2 q11.2 55321 ChimerSeq STARFusion TCGA_RNA-Seq RPL28-FAM159B RPL28 chr19 55899416 + FAM159B chr5 63986324 + Exonic hg19 UCEC TCGA-BG-A0M7-01A 3 0 CDS-5'UTR Inter-chr q13.42 q12.3 55322 ChimerSeq STARFusion TCGA_RNA-Seq RPS27-FAM159B RPS27 chr1 153963699 + FAM159B chr5 63986324 + Exonic hg19 UCEC TCGA-BG-A0M7-01A 3 0 3'UTR-5'UTR Inter-chr q21.3 q12.3 55323 ChimerSeq STARFusion TCGA_RNA-Seq HEPHL1-PANX1 HEPHL1 chr11 93800911 + PANX1 chr11 93862496 + Exonic hg19 UCEC TCGA-BS-A0U5-01A 4 0 Out-of-frame Intra-chr q21 q21 55324 ChimerSeq STARFusion TCGA_RNA-Seq FTL-ZNF536 FTL chr19 49469662 + ZNF536 chr19 31039216 + Exonic hg19 UCEC TCGA-AX-A1CF-01A 14 0 Out-of-frame Intra-chr q13.33 q12 Transcription factor 55325 ChimerSeq STARFusion TCGA_RNA-Seq PCYT1A-TM4SF19 PCYT1A chr3 196014486 - TM4SF19 chr3 196054462 - Exonic hg19 UCEC TCGA-AX-A1CF-01A 9 0 5'UTR-5'UTR Intra-chr q29 q29 55326 ChimerSeq STARFusion TCGA_RNA-Seq PCYT1A-TM4SF19 PCYT1A chr3 196014486 - TM4SF19 chr3 196054462 - Exonic hg19 UCEC TCGA-AX-A1CF-01A 9 0 5'UTR-5'UTR Intra-chr q29 q29 55327 ChimerSeq STARFusion TCGA_RNA-Seq ZNF704-GFER ZNF704 chr8 81733609 - GFER chr16 2035867 + Exonic hg19 UCEC TCGA-AX-A1CF-01A 6 0 In-Frame Inter-chr q21.13 Transcription factor p13.3 Seq+ 55328 ChimerSeq STARFusion TCGA_RNA-Seq SMIM4-GCAT SMIM4 chr3 52570789 + GCAT chr22 38212207 + Exonic hg19 UCEC TCGA-DI-A2QU-01A 10 0 Out-of-frame Inter-chr p21.1 q13.1 55329 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-C11orf85 MYH9 chr22 36691551 - C11orf85 chr11 64722274 - Exonic hg19 UCEC TCGA-DI-A2QU-01A 9 0 In-Frame Inter-chr q12.3 Oncogene Tumor suppressor gene 55330 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-C11orf85 MYH9 chr22 36691551 - C11orf85 chr11 64708118 - Exonic hg19 UCEC TCGA-DI-A2QU-01A 5 0 In-Frame Inter-chr q12.3 Oncogene Tumor suppressor gene 55331 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-C11orf85 MYH9 chr22 36691551 - C11orf85 chr11 64727607 - Exonic hg19 UCEC TCGA-DI-A2QU-01A 4 0 CDS-5'UTR Inter-chr q12.3 Oncogene Tumor suppressor gene 55332 ChimerSeq STARFusion TCGA_RNA-Seq ZNF506-CACNG3 ZNF506 chr19 19932410 - CACNG3 chr16 24358055 + Exonic hg19 UCEC TCGA-A5-A1OG-01A 9 0 Out-of-frame Inter-chr p13.11 Transcription factor p12.1 55333 ChimerSeq STARFusion TCGA_RNA-Seq FGFR2-ATE1 FGFR2 chr10 123353223 - ATE1 chr10 123503373 - Exonic hg19 UCEC TCGA-A5-A1OG-01A 7 0 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q26.13 Seq+ 55334 ChimerSeq STARFusion TCGA_RNA-Seq UQCC1-PSKH1 UQCC1 chr20 33902491 - PSKH1 chr16 67936935 + Exonic hg19 UCEC TCGA-A5-A1OG-01A 5 0 Out-of-frame Inter-chr q11.22 q22.1 CAMK:PSK 55335 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H4-MEIS3 ZC3H4 chr19 47614152 - MEIS3 chr19 47910394 - Exonic hg19 UCEC TCGA-A5-A1OG-01A 5 0 Out-of-frame Intra-chr q13.32 q13.32 Transcription factor 55336 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31802768 + C2 chr6 31868874 + Exonic hg19 UCEC TCGA-AP-A0LN-01A 5 0 Out-of-frame Intra-chr p21.33 55337 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 UCEC TCGA-AP-A0LN-01A 5 0 Out-of-frame Inter-chr p13.13 q13.1 55338 ChimerSeq STARFusion TCGA_RNA-Seq C4A-C2 C4A chr6 31970274 + C2 chr6 31868873 + Exonic hg19 UCEC TCGA-AP-A0LN-01A 3 0 Out-of-frame Intra-chr p21.33 55339 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31805037 + C2 chr6 31868874 + Exonic hg19 UCEC TCGA-AP-A0LN-01A 3 0 Out-of-frame Intra-chr p21.33 55340 ChimerSeq STARFusion TCGA_RNA-Seq EEF1DP1-NEFH EEF1DP1 chr19 14181762 + NEFH chr22 29886508 + Exonic hg19 UCEC TCGA-AP-A0LN-01A 3 0 Out-of-frame Inter-chr p13.12 q12.2 55341 ChimerSeq STARFusion TCGA_RNA-Seq PTMA-GLI2 PTMA chr2 232573297 + GLI2 chr2 121747778 + Exonic hg19 UCEC TCGA-AP-A0LN-01A 3 0 Out-of-frame Intra-chr q37.1 q14.2 Transcription factor 55342 ChimerSeq STARFusion TCGA_RNA-Seq CAPNS1-FTH1 CAPNS1 chr19 36631928 + FTH1 chr11 61734922 - Exonic hg19 UCEC TCGA-AP-A0LG-01A 4 0 Out-of-frame Inter-chr q13.12 q12.3 55343 ChimerSeq STARFusion TCGA_RNA-Seq CLPTM1L-FTH1 CLPTM1L chr5 1345092 - FTH1 chr11 61734930 - Exonic hg19 UCEC TCGA-AP-A0LG-01A 3 0 Out-of-frame Inter-chr p15.33 q12.3 55344 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80950355 - MRPS28 chr8 80831383 - Exonic hg19 UCEC TCGA-BG-A3EW-01A 4 32 Out-of-frame Intra-chr q21.13 q21.13 55345 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC1-ZBTB8OS SMARCC1 chr3 47651556 - ZBTB8OS chr1 33093145 - Exonic hg19 UCEC TCGA-H5-A2HR-01A 10 86 Out-of-frame Inter-chr p21.31 Tumor suppressor gene p35.1 Seq+ 55346 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC1-ZBTB8OS SMARCC1 chr3 47651556 - ZBTB8OS chr1 33087549 - Exonic hg19 UCEC TCGA-H5-A2HR-01A 6 86 Out-of-frame Inter-chr p21.31 Tumor suppressor gene p35.1 Seq+ 55347 ChimerSeq STARFusion TCGA_RNA-Seq NOL9-ESPN NOL9 chr1 6601890 - ESPN chr1 6517244 + Exonic hg19 UCEC TCGA-H5-A2HR-01A 2 17 Out-of-frame Intra-chr p36.31 p36.31 Seq+ 55348 ChimerSeq STARFusion TCGA_RNA-Seq SNX14-SNHG5 SNX14 chr6 86303297 - SNHG5 chr6 86375865 - Exonic hg19 UCEC TCGA-H5-A2HR-01A 2 15 CDS-3'UTR Intra-chr q14.3 q14.3 Seq+ 55349 ChimerSeq STARFusion TCGA_RNA-Seq ANKLE2-RNF180 ANKLE2 chr12 133311992 - RNF180 chr5 63513188 + Exonic hg19 UCEC TCGA-H5-A2HR-01A 2 0 Out-of-frame Inter-chr q24.33 q12.3 Tumor suppressor gene Seq+ 55350 ChimerSeq STARFusion TCGA_RNA-Seq MCM5-HMOX1 MCM5 chr22 35799535 + HMOX1 chr22 35785857 + Exonic hg19 UCEC TCGA-B5-A11I-01A 21 0 In-Frame Intra-chr q12.3 q12.3 Seq+ 55351 ChimerSeq STARFusion TCGA_RNA-Seq HEPHL1-PANX1 HEPHL1 chr11 93800909 + PANX1 chr11 93862494 + Exonic hg19 UCEC TCGA-B5-A11I-01A 5 0 Out-of-frame Intra-chr q21 q21 55352 ChimerSeq STARFusion TCGA_RNA-Seq S100PBP-ZBTB8A S100PBP chr1 33318767 + ZBTB8A chr1 33058532 + Exonic hg19 UCEC TCGA-B5-A11I-01A 4 0 CDS-5'UTR Intra-chr p35.1 p35.1 Transcription factor Seq+ 55353 ChimerSeq STARFusion TCGA_RNA-Seq UHRF1BP1L-PMCH UHRF1BP1L chr12 100536370 - PMCH chr12 102591487 - Exonic hg19 UCEC TCGA-AJ-A3BG-01A 6 37 Out-of-frame Intra-chr q23.1 q23.2 Seq+ 55354 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD6-LTF ANKRD6 chr6 90272273 + LTF chr3 46477698 - Exonic hg19 UCEC TCGA-BG-A0RY-01A 3 0 Out-of-frame Inter-chr q15 p21.31 Oncogene Tumor suppressor gene Transcription factor 55355 ChimerSeq STARFusion TCGA_RNA-Seq URI1-FOXA3 URI1 chr19 30477324 + FOXA3 chr19 46375333 + Exonic hg19 UCEC TCGA-PG-A915-01A 128 478 Out-of-frame Intra-chr q12 q13.32 Transcription factor Seq+ 55356 ChimerSeq STARFusion TCGA_RNA-Seq CDON-NF2 CDON chr11 125848199 - NF2 chr22 30090741 + Exonic hg19 UCEC TCGA-PG-A915-01A 48 169 Out-of-frame Inter-chr q24.2 q12.2 Oncogene Tumor suppressor gene Seq+ 55357 ChimerSeq STARFusion TCGA_RNA-Seq GHRL-SEC13 GHRL chr3 10328388 - SEC13 chr3 10343058 - Exonic hg19 UCEC TCGA-PG-A915-01A 47 140 Out-of-frame Intra-chr p25.3 p25.3 Seq+ 55358 ChimerSeq STARFusion TCGA_RNA-Seq SYMPK-DYRK1B SYMPK chr19 46366316 - DYRK1B chr19 40322608 - Exonic hg19 UCEC TCGA-PG-A915-01A 20 53 5'UTR-5'UTR Intra-chr q13.32 CMGC:DYRK Seq+ 55359 ChimerSeq STARFusion TCGA_RNA-Seq DDT-GHRL DDT chr22 24315957 - GHRL chr3 10328496 - Exonic hg19 UCEC TCGA-PG-A915-01A 14 46 Out-of-frame Inter-chr p25.3 Seq+ 55360 ChimerSeq STARFusion TCGA_RNA-Seq ASXL2-DENND2A ASXL2 chr2 26101035 - DENND2A chr7 140302342 - Exonic hg19 UCEC TCGA-PG-A915-01A 11 43 CDS-5'UTR Inter-chr p23.3 q34 Seq+ 55361 ChimerSeq STARFusion TCGA_RNA-Seq ZNF709-ELL ZNF709 chr19 12595469 - ELL chr19 18557624 - Exonic hg19 UCEC TCGA-PG-A915-01A 12 32 Out-of-frame Intra-chr p13.2 Transcription factor p13.11 Seq+ 55362 ChimerSeq STARFusion TCGA_RNA-Seq DDT-SEC13 DDT chr22 24315957 - SEC13 chr3 10343058 - Exonic hg19 UCEC TCGA-PG-A915-01A 4 55 Out-of-frame Inter-chr p25.3 Seq+ 55363 ChimerSeq STARFusion TCGA_RNA-Seq DDTL-GHRL DDTL chr22 24309749 + GHRL chr3 10328496 - Exonic hg19 UCEC TCGA-PG-A915-01A 11 4 Out-of-frame Inter-chr p25.3 Seq+ 55364 ChimerSeq STARFusion TCGA_RNA-Seq SUPT5H-C19orf57 SUPT5H chr19 39936605 + C19orf57 chr19 14015726 - Exonic hg19 UCEC TCGA-PG-A915-01A 2 36 CDS-5'UTR Intra-chr q13.2 p13.12 Seq+ 55365 ChimerSeq STARFusion TCGA_RNA-Seq SUPT5H-MED29 SUPT5H chr19 39936605 + MED29 chr19 39888097 + Exonic hg19 UCEC TCGA-PG-A915-01A 7 14 In-Frame Intra-chr q13.2 q13.2 Seq+ 55366 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D10A-TFAP2B TBC1D10A chr22 30700520 - TFAP2B chr6 50813414 + Exonic hg19 UCEC TCGA-PG-A915-01A 5 19 CDS-3'UTR Inter-chr q12.2 p12.3 Transcription factor Seq+ 55367 ChimerSeq STARFusion TCGA_RNA-Seq SYMPK-RPRD2 SYMPK chr19 46366316 - RPRD2 chr1 150390072 + Exonic hg19 UCEC TCGA-PG-A915-01A 5 15 5'UTR-CDS Inter-chr q13.32 q21.2 Seq+ 55368 ChimerSeq STARFusion TCGA_RNA-Seq CCDC157-COL21A1 CCDC157 chr22 30758103 + COL21A1 chr6 55942371 - Exonic hg19 UCEC TCGA-PG-A915-01A 4 17 5'UTR-CDS Inter-chr q12.2 p12.1 Seq+ 55369 ChimerSeq STARFusion TCGA_RNA-Seq NCOA3-MLLT6 NCOA3 chr20 46130763 + MLLT6 chr17 36865426 + Exonic hg19 UCEC TCGA-PG-A915-01A 3 19 5'UTR-CDS Inter-chr q13.12 Transcription factor q12 Seq+ 55370 ChimerSeq STARFusion TCGA_RNA-Seq CDC42BPB-LINC00605 CDC42BPB chr14 103416102 - LINC00605 chr14 103654607 - Exonic hg19 UCEC TCGA-PG-A915-01A 2 22 Out-of-frame Intra-chr q32.32 q32.32 55371 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A14-BCORL1 SLC25A14 chrX 129484705 + BCORL1 chrX 129184692 + Exonic hg19 UCEC TCGA-PG-A915-01A 3 15 Out-of-frame Intra-chr q26.1 q26.1 Tumor suppressor gene Seq+ 55372 ChimerSeq STARFusion TCGA_RNA-Seq INTS4-KCTD21 INTS4 chr11 77666988 - KCTD21 chr11 77885629 - Exonic hg19 UCEC TCGA-PG-A915-01A 3 10 CDS-5'UTR Intra-chr q14.1 q14.1 Seq+ 55373 ChimerSeq STARFusion TCGA_RNA-Seq DPF2-SLC22A20 DPF2 chr11 65101389 + SLC22A20 chr11 65000621 + Exonic hg19 UCEC TCGA-PG-A915-01A 3 2 CDS-5'UTR Intra-chr q13.1 q13.1 55374 ChimerSeq STARFusion TCGA_RNA-Seq MUT-CCDC130 MUT chr6 49407919 - CCDC130 chr19 13862422 + Exonic hg19 UCEC TCGA-PG-A915-01A 2 5 CDS-5'UTR Inter-chr p12.3 p13.13 Seq+ 55375 ChimerSeq STARFusion TCGA_RNA-Seq EFHC1-IL17A EFHC1 chr6 52344585 + IL17A chr6 52052401 + Exonic hg19 UCEC TCGA-PG-A915-01A 2 3 Out-of-frame Intra-chr p12.2 p12.2 Tumor suppressor gene Seq+ 55376 ChimerSeq STARFusion TCGA_RNA-Seq DPF2-SLC22A20 DPF2 chr11 65101389 + SLC22A20 chr11 65003880 + Exonic hg19 UCEC TCGA-PG-A915-01A 2 2 CDS-5'UTR Intra-chr q13.1 q13.1 55377 ChimerSeq STARFusion TCGA_RNA-Seq METTL13-DNM3 METTL13 chr1 171783163 + DNM3 chr1 171890888 + Exonic hg19 UCEC TCGA-PG-A915-01A 2 2 3'UTR-CDS Intra-chr q24.3 q24.3 55378 ChimerSeq STARFusion TCGA_RNA-Seq CPSF3L-SLC35E2B CPSF3L chr1 1259961 - SLC35E2B chr1 1608285 - Exonic hg19 UCEC TCGA-PG-A915-01A 2 0 5'UTR-5'UTR Intra-chr p36.33 55379 ChimerSeq STARFusion TCGA_RNA-Seq BMPR1A-C10orf11 BMPR1A chr10 88659883 + C10orf11 chr10 78084159 + Exonic hg19 UCEC TCGA-EY-A3L3-01A 45 347 Out-of-frame Intra-chr q23.2 TKL:STKR Oncogene Tumor suppressor gene Seq+ 55380 ChimerSeq STARFusion TCGA_RNA-Seq BMPR1A-C10orf11 BMPR1A chr10 88659883 + C10orf11 chr10 78316967 + Exonic hg19 UCEC TCGA-EY-A3L3-01A 5 347 Out-of-frame Intra-chr q23.2 TKL:STKR Oncogene Tumor suppressor gene Seq+ 55381 ChimerSeq STARFusion TCGA_RNA-Seq PPP4R1-DPP4 PPP4R1 chr18 9561978 - DPP4 chr2 162851882 - Exonic hg19 UCEC TCGA-EY-A3L3-01A 9 45 In-Frame Inter-chr p11.22 q24.2 Tumor suppressor gene Seq+ 55382 ChimerSeq STARFusion TCGA_RNA-Seq UNK-C1QTNF1 UNK chr17 73781065 + C1QTNF1 chr17 77040037 + Exonic hg19 UCEC TCGA-EY-A3L3-01A 6 38 5'UTR-5'UTR Intra-chr q25.1 q25.3 Seq+ 55383 ChimerSeq STARFusion TCGA_RNA-Seq UNK-C1QTNF1 UNK chr17 73781065 + C1QTNF1 chr17 77042637 + Exonic hg19 UCEC TCGA-EY-A3L3-01A 4 38 In-Frame Intra-chr q25.1 q25.3 Seq+ 55384 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-TRAPPC9 PTK2 chr8 141900642 - TRAPPC9 chr8 141321473 - Exonic hg19 UCEC TCGA-EY-A3L3-01A 6 21 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 55385 ChimerSeq STARFusion TCGA_RNA-Seq RPLP2-DEAF1 RPLP2 chr11 812633 + DEAF1 chr11 644654 - Exonic hg19 UCEC TCGA-EY-A3L3-01A 5 17 5'UTR-CDS Intra-chr p15.5 Transcription factor Seq+ 55386 ChimerSeq STARFusion TCGA_RNA-Seq SAP30BP-UNK SAP30BP chr17 73667943 + UNK chr17 73805841 + Exonic hg19 UCEC TCGA-EY-A3L3-01A 2 6 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 55387 ChimerSeq STARFusion TCGA_RNA-Seq LNPEP-CAST LNPEP chr5 96271878 + CAST chr5 96011243 + Exonic hg19 UCEC TCGA-EY-A3L3-01A 3 1 Out-of-frame Intra-chr q15 q15 Seq+ 55388 ChimerSeq STARFusion TCGA_RNA-Seq ASAP1-IFLTD1 ASAP1 chr8 131370263 - IFLTD1 chr12 25679889 - Exonic hg19 UCEC TCGA-EY-A3L3-01A 2 4 Out-of-frame Inter-chr q24.22 Tumor suppressor gene Seq+ 55389 ChimerSeq STARFusion TCGA_RNA-Seq DSCR4-KCNJ6 DSCR4 chr21 39492401 - KCNJ6 chr21 39213011 - Exonic hg19 UCEC TCGA-EY-A3L3-01A 2 2 CDS-5'UTR Intra-chr q22.13 q22.13 55390 ChimerSeq STARFusion TCGA_RNA-Seq SMCHD1-NDC80 SMCHD1 chr18 2656260 + NDC80 chr18 2601395 + Exonic hg19 UCEC TCGA-2E-A9G8 6 311 In-Frame Intra-chr p11.32 Tumor suppressor gene p11.32 Seq+ 55391 ChimerSeq STARFusion TCGA_RNA-Seq SMCHD1-NDC80 SMCHD1 chr18 2656260 + NDC80 chr18 2606414 + Exonic hg19 UCEC TCGA-2E-A9G8 2 311 In-Frame Intra-chr p11.32 Tumor suppressor gene p11.32 Seq+ 55392 ChimerSeq STARFusion TCGA_RNA-Seq RARA-CERS4 RARA chr17 38474700 + CERS4 chr19 8315960 + Exonic hg19 UCEC TCGA-2E-A9G8 21 111 5'UTR-5'UTR Inter-chr q21.2 Oncogene Transcription factor p13.2 Seq+ 55393 ChimerSeq STARFusion TCGA_RNA-Seq RARA-CERS4 RARA chr17 38474700 + CERS4 chr19 8315928 + Exonic hg19 UCEC TCGA-2E-A9G8 8 111 5'UTR-5'UTR Inter-chr q21.2 Oncogene Transcription factor p13.2 Seq+ 55394 ChimerSeq STARFusion TCGA_RNA-Seq EEF1G-BSCL2 EEF1G chr11 62334278 - BSCL2 chr11 62462183 - Exonic hg19 UCEC TCGA-2E-A9G8 25 38 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 55395 ChimerSeq STARFusion TCGA_RNA-Seq MIR3654-BSCL2 MIR3654 chr11 62334278 - BSCL2 chr11 62462183 - Exonic hg19 UCEC TCGA-2E-A9G8 25 38 5'UTR-CDS Intra-chr q33 q12.3 55396 ChimerSeq STARFusion TCGA_RNA-Seq RARA-CERS4 RARA chr17 38474700 + CERS4 chr19 8319383 + Exonic hg19 UCEC TCGA-2E-A9G8 5 111 5'UTR-CDS Inter-chr q21.2 Oncogene Transcription factor p13.2 Seq+ 55397 ChimerSeq STARFusion TCGA_RNA-Seq RARA-CERS4 RARA chr17 38465538 + CERS4 chr19 8315960 + Exonic hg19 UCEC TCGA-2E-A9G8 3 111 5'UTR-5'UTR Inter-chr q21.2 Oncogene Transcription factor p13.2 Seq+ 55398 ChimerSeq STARFusion TCGA_RNA-Seq SPPL2B-GALK1 SPPL2B chr19 2351592 + GALK1 chr17 73747818 - Exonic hg19 UCEC TCGA-2E-A9G8 4 35 CDS-3'UTR Inter-chr p13.3 q25.1 Seq+ 55399 ChimerSeq STARFusion TCGA_RNA-Seq SPPL2B-GALK1 SPPL2B chr19 2345328 + GALK1 chr17 73747818 - Exonic hg19 UCEC TCGA-2E-A9G8 4 35 CDS-3'UTR Inter-chr p13.3 q25.1 Seq+ 55400 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB8OS-YARS ZBTB8OS chr1 33097428 - YARS chr1 33252676 - Exonic hg19 UCEC TCGA-2E-A9G8 2 14 Out-of-frame Intra-chr p35.1 p35.1 Seq+ 55401 ChimerSeq STARFusion TCGA_RNA-Seq UBE2K-WDR19 UBE2K chr4 39757359 + WDR19 chr4 39245868 + Exonic hg19 UCEC TCGA-2E-A9G8 2 2 Out-of-frame Intra-chr p14 p14 Seq+ 55402 ChimerSeq STARFusion TCGA_RNA-Seq CKAP5-HARBI1 CKAP5 chr11 46771824 - HARBI1 chr11 46625459 - Exonic hg19 UCEC TCGA-2E-A9G8 2 1 In-Frame Intra-chr p11.2 p11.2 55403 ChimerSeq STARFusion TCGA_RNA-Seq GALM-STIP1 GALM chr2 38903208 + STIP1 chr11 63967412 + Exonic hg19 UCEC TCGA-EY-A212-01A 10 0 In-Frame Inter-chr p22.1 q13.1 Seq+ 55404 ChimerSeq STARFusion TCGA_RNA-Seq LASP1-PSMB3 LASP1 chr17 37034433 + PSMB3 chr17 36909403 + Exonic hg19 UCEC TCGA-EY-A212-01A 10 0 Out-of-frame Intra-chr q12 55405 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1958-UBE2R2 KIAA1958 chr9 115249398 + UBE2R2 chr9 33911962 + Exonic hg19 UCEC TCGA-EY-A212-01A 8 0 5'UTR-CDS Intra-chr q32 p13.3 Seq+ 55406 ChimerSeq STARFusion TCGA_RNA-Seq LASP1-PSMB3 LASP1 chr17 37034433 + PSMB3 chr17 36912136 + Exonic hg19 UCEC TCGA-EY-A212-01A 8 0 In-Frame Intra-chr q12 55407 ChimerSeq STARFusion TCGA_RNA-Seq UBAP2-KIF24 UBAP2 chr9 34048823 - KIF24 chr9 34263170 - Exonic hg19 UCEC TCGA-EY-A212-01A 8 0 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 55408 ChimerSeq STARFusion TCGA_RNA-Seq EYA2-SLC2A10 EYA2 chr20 45633723 + SLC2A10 chr20 45353680 + Exonic hg19 UCEC TCGA-EY-A212-01A 6 0 In-Frame Intra-chr q13.12 q13.12 Seq+ 55409 ChimerSeq STARFusion TCGA_RNA-Seq ESRP1-NDUFAF6 ESRP1 chr8 95680478 + NDUFAF6 chr8 96047682 + Exonic hg19 UCEC TCGA-EY-A212-01A 5 0 Out-of-frame Intra-chr q22.1 Tumor suppressor gene q22.1 55410 ChimerSeq STARFusion TCGA_RNA-Seq GFOD2-PSMB10 GFOD2 chr16 67753066 - PSMB10 chr16 67969600 - Exonic hg19 UCEC TCGA-EY-A212-01A 5 0 5'UTR-CDS Intra-chr q22.1 q22.1 55411 ChimerSeq STARFusion TCGA_RNA-Seq CALM3-BAD CALM3 chr19 47104694 + BAD chr11 64039275 - Exonic hg19 UCEC TCGA-EY-A212-01A 4 0 Out-of-frame Inter-chr q13.32 q13.1 Seq+ 55412 ChimerSeq STARFusion TCGA_RNA-Seq SRC-RPN2 SRC chr20 35993680 + RPN2 chr20 35832288 + Exonic hg19 UCEC TCGA-EY-A212-01A 4 0 5'UTR-CDS Intra-chr q11.23 TK:Src Oncogene q11.23 Seq+ 55413 ChimerSeq STARFusion TCGA_RNA-Seq SRSF9-COX6A1 SRSF9 chr12 120907225 - COX6A1 chr12 120876182 + Exonic hg19 UCEC TCGA-BG-A0M6-01A 25 0 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 55414 ChimerSeq STARFusion TCGA_RNA-Seq DOT1L-CSNK1G2 DOT1L chr19 2180755 + CSNK1G2 chr19 1969507 + Exonic hg19 UCEC TCGA-BG-A0M6-01A 9 0 CDS-5'UTR Intra-chr p13.3 Oncogene Transcription factor p13.3 Seq+ 55415 ChimerSeq STARFusion TCGA_RNA-Seq ALS2CL-UBXN11 ALS2CL chr3 46714829 - UBXN11 chr1 26612528 - Exonic hg19 UCEC TCGA-DF-A2KS-01A 4 0 Out-of-frame Inter-chr p21.31 p36.11 55416 ChimerSeq STARFusion TCGA_RNA-Seq RFXANK-SUGP1 RFXANK chr19 19310043 + SUGP1 chr19 19391100 - Exonic hg19 UCEC TCGA-AJ-A3NH-01A 58 268 In-Frame Intra-chr p13.11 p13.11 Seq+ 55417 ChimerSeq STARFusion TCGA_RNA-Seq FNBP4-INSL3 FNBP4 chr11 47752926 - INSL3 chr19 17927868 - Exonic hg19 UCEC TCGA-AJ-A3NH-01A 24 124 In-Frame Inter-chr p11.2 p13.11 Seq+ 55418 ChimerSeq STARFusion TCGA_RNA-Seq PAN3-IGH@ PAN3 chr13 28713224 + IGH@ chr14 107283096 - Exonic hg19 UCEC TCGA-AJ-A3NH-01A 40 59 Out-of-frame Inter-chr q12.2 32.33 55419 ChimerSeq STARFusion TCGA_RNA-Seq CPNE2-MT1E CPNE2 chr16 57126702 + MT1E chr16 56660378 + Exonic hg19 UCEC TCGA-AJ-A3NH-01A 44 13 5'UTR-CDS Intra-chr q13 q13 Seq+ 55420 ChimerSeq STARFusion TCGA_RNA-Seq GALNT16-RAD51B GALNT16 chr14 69791507 + RAD51B chr14 69149654 + Exonic hg19 UCEC TCGA-AJ-A3NH-01A 19 110 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 55421 ChimerSeq STARFusion TCGA_RNA-Seq FAM168A-RAB6A FAM168A chr11 73308968 - RAB6A chr11 73431944 - Exonic hg19 UCEC TCGA-AJ-A3NH-01A 10 55 5'UTR-CDS Intra-chr q13.4 q13.4 Seq+ 55422 ChimerSeq STARFusion TCGA_RNA-Seq GNAI2-SLC39A11 GNAI2 chr3 50293752 + SLC39A11 chr17 70732858 - Exonic hg19 UCEC TCGA-AJ-A3NH-01A 13 39 Out-of-frame Inter-chr p21.31 q25.1 Seq+ 55423 ChimerSeq STARFusion TCGA_RNA-Seq ZNF646-VSTM1 ZNF646 chr16 31085952 + VSTM1 chr19 54545623 - Exonic hg19 UCEC TCGA-AJ-A3NH-01A 6 30 5'UTR-CDS Inter-chr p11.2 Transcription factor Seq+ 55424 ChimerSeq STARFusion TCGA_RNA-Seq GNAI2-SLC39A11 GNAI2 chr3 50273885 + SLC39A11 chr17 70732858 - Exonic hg19 UCEC TCGA-AJ-A3NH-01A 2 39 In-Frame Inter-chr p21.31 q25.1 Seq+ 55425 ChimerSeq STARFusion TCGA_RNA-Seq LMAN2-KIAA0226 LMAN2 chr5 176761285 - KIAA0226 chr3 197411088 - Exonic hg19 UCEC TCGA-AJ-A3NH-01A 7 18 In-Frame Inter-chr q35.3 55426 ChimerSeq STARFusion TCGA_RNA-Seq PEX14-EPHA2 PEX14 chr1 10555378 + EPHA2 chr1 16458934 - Exonic hg19 UCEC TCGA-AJ-A3NH-01A 3 18 Out-of-frame Intra-chr p36.22 p36.13 Tumor suppressor gene Seq+ 55427 ChimerSeq STARFusion TCGA_RNA-Seq FBXO17-LGALS7 FBXO17 chr19 39466226 - LGALS7 chr19 39263743 - Exonic hg19 UCEC TCGA-AJ-A3NH-01A 2 16 5'UTR-CDS Intra-chr Tumor suppressor gene Seq+ 55428 ChimerSeq STARFusion TCGA_RNA-Seq FBXO17-LGALS7 FBXO17 chr19 39466226 - LGALS7 chr19 39262670 - Exonic hg19 UCEC TCGA-AJ-A3NH-01A 2 16 5'UTR-CDS Intra-chr Tumor suppressor gene Seq+ 55429 ChimerSeq STARFusion TCGA_RNA-Seq LDLR-DNM2 LDLR chr19 11200291 + DNM2 chr19 10935733 + Exonic hg19 UCEC TCGA-AJ-A3NH-01A 2 13 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 55430 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF1-CPNE5 RAPGEF1 chr9 134615157 - CPNE5 chr6 36762426 - Exonic hg19 UCEC TCGA-AJ-A3NH-01A 4 2 5'UTR-CDS Inter-chr q34.13 p21.2 Seq+ 55431 ChimerSeq STARFusion TCGA_RNA-Seq SPINT2-PPP1R14A SPINT2 chr19 38755638 + PPP1R14A chr19 38742978 - Exonic hg19 UCEC TCGA-AJ-A3NH-01A 2 7 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 Seq+ 55432 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF1-CPNE5 RAPGEF1 chr9 134615157 - CPNE5 chr6 36746734 - Exonic hg19 UCEC TCGA-AJ-A3NH-01A 3 2 5'UTR-CDS Inter-chr q34.13 p21.2 Seq+ 55433 ChimerSeq STARFusion TCGA_RNA-Seq TREX1-ATRIP TREX1 chr3 48507708 + ATRIP chr3 48505144 + Exonic hg19 UCEC TCGA-BS-A0TI-01A 6 0 5'UTR-CDS Intra-chr p21.31 p21.31 55434 ChimerSeq STARFusion TCGA_RNA-Seq RNPS1-ABCA3 RNPS1 chr16 2318056 - ABCA3 chr16 2334999 - Exonic hg19 UCEC TCGA-BS-A0TI-01A 2 0 5'UTR-3'UTR Intra-chr p13.3 p13.3 55435 ChimerSeq STARFusion TCGA_RNA-Seq GPS1-RFNG GPS1 chr17 80015001 + RFNG chr17 80006114 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 99 353 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 55436 ChimerSeq STARFusion TCGA_RNA-Seq PRR4-DUSP16 PRR4 chr12 11324021 - DUSP16 chr12 12674397 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 47 157 5'UTR-5'UTR Intra-chr Seq+ 55437 ChimerSeq STARFusion TCGA_RNA-Seq TAS2R14-DUSP16 TAS2R14 chr12 11324021 - DUSP16 chr12 12674397 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 47 154 5'UTR-5'UTR Intra-chr 55438 ChimerSeq STARFusion TCGA_RNA-Seq USP48-INA USP48 chr1 22109317 - INA chr10 105046792 + Exonic hg19 UCEC TCGA-AJ-A3BF-01A 38 158 Out-of-frame Inter-chr p36.12 q24.33 Seq+ 55439 ChimerSeq STARFusion TCGA_RNA-Seq ECE1-WNT4 ECE1 chr1 21599192 - WNT4 chr1 22448069 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 33 120 In-Frame Intra-chr p36.12 p36.12 Seq+ 55440 ChimerSeq STARFusion TCGA_RNA-Seq GPS1-BLVRA GPS1 chr17 80009840 + BLVRA chr7 43840064 + Exonic hg19 UCEC TCGA-AJ-A3BF-01A 16 87 Out-of-frame Inter-chr q25.3 p13 Seq+ 55441 ChimerSeq STARFusion TCGA_RNA-Seq HDAC7-VSTM2B HDAC7 chr12 48213550 - VSTM2B chr19 30018118 + Exonic hg19 UCEC TCGA-AJ-A3BF-01A 23 45 In-Frame Inter-chr q13.11 q12 Seq+ 55442 ChimerSeq STARFusion TCGA_RNA-Seq CERCAM-STXBP1 CERCAM chr9 131193582 + STXBP1 chr9 130457273 + Exonic hg19 UCEC TCGA-AJ-A3BF-01A 14 78 CDS-3'UTR Intra-chr q34.11 q34.11 Seq+ 55443 ChimerSeq STARFusion TCGA_RNA-Seq RERE-SLC2A5 RERE chr1 8555123 - SLC2A5 chr1 9118309 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 15 71 In-Frame Intra-chr p36.23 p36.23 Seq+ 55444 ChimerSeq STARFusion TCGA_RNA-Seq MRPS18A-CDIP1 MRPS18A chr6 43655405 - CDIP1 chr16 4564665 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 10 85 Out-of-frame Inter-chr p21.1 p13.3 Seq+ 55445 ChimerSeq STARFusion TCGA_RNA-Seq GPS1-BLVRA GPS1 chr17 80011242 + BLVRA chr7 43840064 + Exonic hg19 UCEC TCGA-AJ-A3BF-01A 7 87 Out-of-frame Inter-chr q25.3 p13 Seq+ 55446 ChimerSeq STARFusion TCGA_RNA-Seq ZNF532-NEDD4L ZNF532 chr18 56585954 + NEDD4L chr18 56018223 + Exonic hg19 UCEC TCGA-AJ-A3BF-01A 10 70 In-Frame Intra-chr q21.32 Transcription factor q21.31 Tumor suppressor gene Seq+ 55447 ChimerSeq STARFusion TCGA_RNA-Seq PA2G4-RAB5B PA2G4 chr12 56503719 + RAB5B chr12 56385881 + Exonic hg19 UCEC TCGA-AJ-A3BF-01A 12 60 Out-of-frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 55448 ChimerSeq STARFusion TCGA_RNA-Seq RERE-SLC2A5 RERE chr1 8555123 - SLC2A5 chr1 9129653 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 8 71 CDS-5'UTR Intra-chr p36.23 p36.23 Seq+ 55449 ChimerSeq STARFusion TCGA_RNA-Seq CUEDC1-COPZ2 CUEDC1 chr17 55962590 - COPZ2 chr17 46111310 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 9 51 In-Frame Intra-chr q22 q21.32 Seq+ 55450 ChimerSeq STARFusion TCGA_RNA-Seq CERCAM-STXBP1 CERCAM chr9 131191315 + STXBP1 chr9 130457273 + Exonic hg19 UCEC TCGA-AJ-A3BF-01A 2 78 CDS-3'UTR Intra-chr q34.11 q34.11 Seq+ 55451 ChimerSeq STARFusion TCGA_RNA-Seq LETM1-MXD4 LETM1 chr4 1838156 - MXD4 chr4 2259738 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 5 44 Out-of-frame Intra-chr p16.3 p16.3 Transcription factor Seq+ 55452 ChimerSeq STARFusion TCGA_RNA-Seq CUEDC1-COPZ2 CUEDC1 chr17 55962590 - COPZ2 chr17 46106542 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 2 51 Out-of-frame Intra-chr q22 q21.32 Seq+ 55453 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC1-MAP4 SMARCC1 chr3 47651556 - MAP4 chr3 47913590 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 5 30 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 55454 ChimerSeq STARFusion TCGA_RNA-Seq GPS1-STRA13 GPS1 chr17 80009840 + STRA13 chr17 79977785 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 7 21 In-Frame Intra-chr q25.3 Seq+ 55455 ChimerSeq STARFusion TCGA_RNA-Seq RRNAD1-CTSS RRNAD1 chr1 156699007 + CTSS chr1 150730456 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 4 20 In-Frame Intra-chr q23.1 q21.3 Seq+ 55456 ChimerSeq STARFusion TCGA_RNA-Seq SHANK2-PIP5KL1 SHANK2 chr11 70803468 - PIP5KL1 chr9 130683883 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 6 11 Out-of-frame Inter-chr q13.4 q34.11 Seq+ 55457 ChimerSeq STARFusion TCGA_RNA-Seq GLS-ANKAR GLS chr2 191796363 + ANKAR chr2 190609468 + Exonic hg19 UCEC TCGA-AJ-A3BF-01A 2 20 Out-of-frame Intra-chr q32.2 Tumor suppressor gene q32.2 Seq+ 55458 ChimerSeq STARFusion TCGA_RNA-Seq SHANK2-ITPK1 SHANK2 chr11 70963471 - ITPK1 chr14 93542964 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 4 10 5'UTR-CDS Inter-chr q13.4 Seq+ 55459 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-CASC8 PVT1 chr8 128806980 + CASC8 chr8 128302305 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 3 12 Out-of-frame Intra-chr q24.21 q24.21 55460 ChimerSeq STARFusion TCGA_RNA-Seq TMEM184B-DNAH14 TMEM184B chr22 38668890 - DNAH14 chr1 225562390 + Exonic hg19 UCEC TCGA-AJ-A3BF-01A 2 13 5'UTR-CDS Inter-chr q13.1 q42.12 Seq+ 55461 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-CASC8 PVT1 chr8 128806980 + CASC8 chr8 128433208 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 2 12 Out-of-frame Intra-chr q24.21 q24.21 55462 ChimerSeq STARFusion TCGA_RNA-Seq LGR6-NAV1 LGR6 chr1 202205121 + NAV1 chr1 201749549 + Exonic hg19 UCEC TCGA-AJ-A3BF-01A 2 4 In-Frame Intra-chr q32.1 q32.1 Seq+ 55463 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 UCEC TCGA-E6-A1LX-01A 4 0 Out-of-frame Inter-chr p13.13 q13.1 55464 ChimerSeq STARFusion TCGA_RNA-Seq RPL13A-CERS5 RPL13A chr19 49993177 + CERS5 chr12 50561198 - Exonic hg19 UCEC TCGA-D1-A16O-01A 4 0 Out-of-frame Inter-chr q13.33 q13.12 55465 ChimerSeq STARFusion TCGA_RNA-Seq EEF1A1P19-ZNF536 EEF1A1P19 chr5 43495332 - ZNF536 chr19 31039215 + Exonic hg19 UCEC TCGA-B5-A0JU-01B 5 0 Out-of-frame Inter-chr p12 q12 Transcription factor 55466 ChimerSeq STARFusion TCGA_RNA-Seq CDS2-PCBP2 CDS2 chr20 5177910 + PCBP2 chr12 53873469 + Exonic hg19 UCEC TCGA-AX-A06H-01A 3 0 Out-of-frame Inter-chr p12.3 q13.13 55467 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-TYRO3 IGKC chr2 89156966 - TYRO3 chr15 41854865 + Exonic hg19 UCEC TCGA-AX-A06H-01A 3 0 Out-of-frame Inter-chr p11.2 q15.1 TK:Axl 55468 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC10-RPL31P50 DNAJC10 chr2 183653145 + RPL31P50 chr12 31750085 - Exonic hg19 UCEC TCGA-A5-A0R9-01A 3 0 Out-of-frame Inter-chr q32.1 p11.21 55469 ChimerSeq STARFusion TCGA_RNA-Seq RPL23AP12-ZNF536 RPL23AP12 chr21 40499747 + ZNF536 chr19 31039218 + Exonic hg19 UCEC TCGA-D1-A17T-01A 5 0 Out-of-frame Inter-chr q22.2 q12 Transcription factor 55470 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31831394 - Exonic hg19 UCEC TCGA-D1-A17T-01A 5 0 Out-of-frame Intra-chr p21.33 Transcription factor 55471 ChimerSeq STARFusion TCGA_RNA-Seq MEF2D-CRABP2 MEF2D chr1 156470278 - CRABP2 chr1 156675338 - Exonic hg19 UCEC TCGA-AX-A1C9-01A 8 0 5'UTR-5'UTR Intra-chr q22 Transcription factor q23.1 55472 ChimerSeq STARFusion TCGA_RNA-Seq RNF26-FOXR1 RNF26 chr11 119205325 + FOXR1 chr11 118842525 + Exonic hg19 UCEC TCGA-BK-A0CA-01A 23 0 Out-of-frame Intra-chr q23.3 Transcription factor Seq+ 55473 ChimerSeq STARFusion TCGA_RNA-Seq GAPDH-MAN1C1 GAPDH chr12 6647524 + MAN1C1 chr1 26112407 + Exonic hg19 UCEC TCGA-BG-A0LX-01A 4 0 Out-of-frame Inter-chr p13.31 p36.11 55474 ChimerSeq STARFusion TCGA_RNA-Seq HEPHL1-PANX1 HEPHL1 chr11 93800911 + PANX1 chr11 93862496 + Exonic hg19 UCEC TCGA-BK-A0CC-01A 4 0 Out-of-frame Intra-chr q21 q21 55475 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2-AQP10 NOTCH2 chr1 120572529 - AQP10 chr1 154295458 + Exonic hg19 UCEC TCGA-BK-A0CC-01A 4 0 Out-of-frame Intra-chr p12 Oncogene Tumor suppressor gene q21.3 55476 ChimerSeq STARFusion TCGA_RNA-Seq PCMTD1-ST18 PCMTD1 chr8 52811490 - ST18 chr8 53085143 - Exonic hg19 UCEC TCGA-BK-A0CC-01A 3 0 5'UTR-CDS Intra-chr q11.23 q11.23 Transcription factor Seq+ 55477 ChimerSeq STARFusion TCGA_RNA-Seq URI1-ARHGAP33 URI1 chr19 30433571 + ARHGAP33 chr19 36275074 + Exonic hg19 UCEC TCGA-BK-A0CC-01A 3 0 Out-of-frame Intra-chr q12 q13.12 Seq+ 55478 ChimerSeq STARFusion TCGA_RNA-Seq PCBP2-LINC00592 PCBP2 chr12 53849785 + LINC00592 chr12 52617230 + Exonic hg19 UCEC TCGA-AP-A05A-01A 50 0 CDS-5'UTR Intra-chr q13.13 q13.13 Seq+ 55479 ChimerSeq STARFusion TCGA_RNA-Seq MIEN1-TCAP MIEN1 chr17 37885938 - TCAP chr17 37821969 + Exonic hg19 UCEC TCGA-AP-A05A-01A 2 0 Out-of-frame Intra-chr q12 q12 55480 ChimerSeq STARFusion TCGA_RNA-Seq RP1-RGS20 RP1 chr8 55534848 + RGS20 chr8 54826057 + Exonic hg19 UCEC TCGA-AP-A05A-01A 2 0 Out-of-frame Intra-chr q11.23 q11.23 55481 ChimerSeq STARFusion TCGA_RNA-Seq RBL1-BCAS1 RBL1 chr20 35651053 - BCAS1 chr20 52561535 - Exonic hg19 UCEC TCGA-EY-A547-01A 6 21 In-Frame Intra-chr q11.23 Tumor suppressor gene q13.2 Seq+ 55482 ChimerSeq STARFusion TCGA_RNA-Seq C6orf141-ZNF529 C6orf141 chr6 49522870 + ZNF529 chr19 37073608 - Exonic hg19 UCEC TCGA-EY-A547-01A 7 3 Out-of-frame Inter-chr p12.3 q13.12 Transcription factor 55483 ChimerSeq STARFusion TCGA_RNA-Seq PLEKHA2-ADAM32 PLEKHA2 chr8 38793568 + ADAM32 chr8 39141105 + Exonic hg19 UCEC TCGA-EY-A547-01A 2 1 Out-of-frame Intra-chr p11.22 55484 ChimerSeq STARFusion TCGA_RNA-Seq SOCS5-MSH2 SOCS5 chr2 46926588 + MSH2 chr2 47656881 + Exonic hg19 UCEC TCGA-AJ-A3OJ-01A 3 12 5'UTR-CDS Intra-chr p21 p21 Oncogene Tumor suppressor gene Seq+ 55485 ChimerSeq STARFusion TCGA_RNA-Seq MEF2A-LRRC28 MEF2A chr15 100215663 + LRRC28 chr15 99892574 + Exonic hg19 UCEC TCGA-PG-A5BC-01A 31 78 In-Frame Intra-chr q26.3 Transcription factor q26.3 Seq+ 55486 ChimerSeq STARFusion TCGA_RNA-Seq REV3L-TRAF3IP2 REV3L chr6 111714079 - TRAF3IP2 chr6 111913297 - Exonic hg19 UCEC TCGA-PG-A5BC-01A 8 32 CDS-5'UTR Intra-chr q21 q21 Seq+ 55487 ChimerSeq STARFusion TCGA_RNA-Seq COG4-MFI2 COG4 chr16 70534861 - MFI2 chr3 196753630 - Exonic hg19 UCEC TCGA-PG-A5BC-01A 3 28 Out-of-frame Inter-chr q22.1 Seq+ 55488 ChimerSeq STARFusion TCGA_RNA-Seq POC1A-TLR9 POC1A chr3 52172185 - TLR9 chr3 52266133 - Exonic hg19 UCEC TCGA-PG-A5BC-01A 3 20 CDS-5'UTR Intra-chr p21.2 p21.2 Seq+ 55489 ChimerSeq STARFusion TCGA_RNA-Seq POC1A-TLR9 POC1A chr3 52172185 - TLR9 chr3 52265555 - Exonic hg19 UCEC TCGA-PG-A5BC-01A 3 20 CDS-5'UTR Intra-chr p21.2 p21.2 Seq+ 55490 ChimerSeq STARFusion TCGA_RNA-Seq POC1A-TWF2 POC1A chr3 52172185 - TWF2 chr3 52266133 - Exonic hg19 UCEC TCGA-PG-A5BC-01A 3 20 Out-of-frame Intra-chr p21.2 p21.2 Seq+ 55491 ChimerSeq STARFusion TCGA_RNA-Seq POC1A-TWF2 POC1A chr3 52172185 - TWF2 chr3 52265555 - Exonic hg19 UCEC TCGA-PG-A5BC-01A 3 20 In-Frame Intra-chr p21.2 p21.2 Seq+ 55492 ChimerSeq STARFusion TCGA_RNA-Seq RERE-SLC2A7 RERE chr1 8716032 - SLC2A7 chr1 9079392 - Exonic hg19 UCEC TCGA-PG-A5BC-01A 3 19 Out-of-frame Intra-chr p36.23 p36.23 Seq+ 55493 ChimerSeq STARFusion TCGA_RNA-Seq DDX46-CDC25C DDX46 chr5 134094645 + CDC25C chr5 137666903 - Exonic hg19 UCEC TCGA-PG-A5BC-01A 2 19 CDS-5'UTR Intra-chr q31.1 q31.2 Seq+ 55494 ChimerSeq STARFusion TCGA_RNA-Seq RERE-SLC2A7 RERE chr1 8716032 - SLC2A7 chr1 9085133 - Exonic hg19 UCEC TCGA-PG-A5BC-01A 2 19 Out-of-frame Intra-chr p36.23 p36.23 Seq+ 55495 ChimerSeq STARFusion TCGA_RNA-Seq WWC1-TENM2 WWC1 chr5 167719276 + TENM2 chr5 167689054 + Exonic hg19 UCEC TCGA-PG-A5BC-01A 3 10 Out-of-frame Intra-chr q34 q34 55496 ChimerSeq STARFusion TCGA_RNA-Seq GON4L-RIT1 GON4L chr1 155826938 - RIT1 chr1 155874595 - Exonic hg19 UCEC TCGA-PG-A5BC-01A 3 8 5'UTR-CDS Intra-chr q22 q22 Seq+ 55497 ChimerSeq STARFusion TCGA_RNA-Seq PAK4-PAPL PAK4 chr19 39616559 + PAPL chr19 39575732 + Exonic hg19 UCEC TCGA-PG-A5BC-01A 2 11 5'UTR-5'UTR Intra-chr q13.2 STE:STE20 55498 ChimerSeq STARFusion TCGA_RNA-Seq CCAR1-TET1 CCAR1 chr10 70517134 + TET1 chr10 70432652 + Exonic hg19 UCEC TCGA-PG-A5BC-01A 2 5 Out-of-frame Intra-chr q21.3 Tumor suppressor gene q21.3 Oncogene Transcription factor Seq+ 55499 ChimerSeq STARFusion TCGA_RNA-Seq POLN-TFF3 POLN chr4 2078366 - TFF3 chr21 43733709 - Exonic hg19 UCEC TCGA-AX-A060-01A 6 0 Out-of-frame Inter-chr p16.3 q22.3 55500 ChimerSeq STARFusion TCGA_RNA-Seq SMCHD1-NDC80 SMCHD1 chr18 2656260 + NDC80 chr18 2601395 + Exonic hg19 UCEC TCGA-2E-A9G8-01A 6 311 In-Frame Intra-chr p11.32 Tumor suppressor gene p11.32 Seq+ 55501 ChimerSeq STARFusion TCGA_RNA-Seq SMCHD1-NDC80 SMCHD1 chr18 2656260 + NDC80 chr18 2606414 + Exonic hg19 UCEC TCGA-2E-A9G8-01A 2 311 In-Frame Intra-chr p11.32 Tumor suppressor gene p11.32 Seq+ 55502 ChimerSeq STARFusion TCGA_RNA-Seq RARA-CERS4 RARA chr17 38474700 + CERS4 chr19 8315960 + Exonic hg19 UCEC TCGA-2E-A9G8-01A 21 111 5'UTR-5'UTR Inter-chr q21.2 Oncogene Transcription factor p13.2 Seq+ 55503 ChimerSeq STARFusion TCGA_RNA-Seq RARA-CERS4 RARA chr17 38474700 + CERS4 chr19 8315928 + Exonic hg19 UCEC TCGA-2E-A9G8-01A 8 111 5'UTR-5'UTR Inter-chr q21.2 Oncogene Transcription factor p13.2 Seq+ 55504 ChimerSeq STARFusion TCGA_RNA-Seq EEF1G-BSCL2 EEF1G chr11 62334278 - BSCL2 chr11 62462183 - Exonic hg19 UCEC TCGA-2E-A9G8-01A 25 38 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 55505 ChimerSeq STARFusion TCGA_RNA-Seq MIR3654-BSCL2 MIR3654 chr11 62334278 - BSCL2 chr11 62462183 - Exonic hg19 UCEC TCGA-2E-A9G8-01A 25 38 5'UTR-CDS Intra-chr q33 q12.3 55506 ChimerSeq STARFusion TCGA_RNA-Seq RARA-CERS4 RARA chr17 38474700 + CERS4 chr19 8319383 + Exonic hg19 UCEC TCGA-2E-A9G8-01A 5 111 5'UTR-CDS Inter-chr q21.2 Oncogene Transcription factor p13.2 Seq+ 55507 ChimerSeq STARFusion TCGA_RNA-Seq RARA-CERS4 RARA chr17 38465538 + CERS4 chr19 8315960 + Exonic hg19 UCEC TCGA-2E-A9G8-01A 3 111 5'UTR-5'UTR Inter-chr q21.2 Oncogene Transcription factor p13.2 Seq+ 55508 ChimerSeq STARFusion TCGA_RNA-Seq SPPL2B-GALK1 SPPL2B chr19 2351592 + GALK1 chr17 73747818 - Exonic hg19 UCEC TCGA-2E-A9G8-01A 4 35 CDS-3'UTR Inter-chr p13.3 q25.1 Seq+ 55509 ChimerSeq STARFusion TCGA_RNA-Seq SPPL2B-GALK1 SPPL2B chr19 2345328 + GALK1 chr17 73747818 - Exonic hg19 UCEC TCGA-2E-A9G8-01A 4 35 CDS-3'UTR Inter-chr p13.3 q25.1 Seq+ 55510 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB8OS-YARS ZBTB8OS chr1 33097428 - YARS chr1 33252676 - Exonic hg19 UCEC TCGA-2E-A9G8-01A 2 14 Out-of-frame Intra-chr p35.1 p35.1 Seq+ 55511 ChimerSeq STARFusion TCGA_RNA-Seq UBE2K-WDR19 UBE2K chr4 39757359 + WDR19 chr4 39245868 + Exonic hg19 UCEC TCGA-2E-A9G8-01A 2 2 Out-of-frame Intra-chr p14 p14 Seq+ 55512 ChimerSeq STARFusion TCGA_RNA-Seq CKAP5-HARBI1 CKAP5 chr11 46771824 - HARBI1 chr11 46625459 - Exonic hg19 UCEC TCGA-2E-A9G8-01A 2 1 In-Frame Intra-chr p11.2 p11.2 55513 ChimerSeq STARFusion TCGA_RNA-Seq BEX5-SYT7 BEX5 chrX 101409715 - SYT7 chr11 61282949 - Exonic hg19 UCEC TCGA-AX-A2HJ-01A 11 0 Out-of-frame Inter-chr q22.1 q12.2 55514 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868874 - SLC44A4 chr6 31831073 - Exonic hg19 UCEC TCGA-AP-A0LJ-01A 6 0 Out-of-frame Intra-chr p21.33 Transcription factor 55515 ChimerSeq STARFusion TCGA_RNA-Seq C4A-C2 C4A chr6 31970238 + C2 chr6 31868874 + Exonic hg19 UCEC TCGA-AP-A0LJ-01A 5 0 Out-of-frame Intra-chr p21.33 55516 ChimerSeq STARFusion TCGA_RNA-Seq RPL12-FAM159B RPL12 chr9 130210161 - FAM159B chr5 63986325 + Exonic hg19 UCEC TCGA-AP-A0LJ-01A 4 0 Out-of-frame Inter-chr q33.3 q12.3 55517 ChimerSeq STARFusion TCGA_RNA-Seq C4A-C2 C4A chr6 31970274 + C2 chr6 31868873 + Exonic hg19 UCEC TCGA-AP-A0LJ-01A 3 0 Out-of-frame Intra-chr p21.33 55518 ChimerSeq STARFusion TCGA_RNA-Seq EDF1-FAM159B EDF1 chr9 139757358 - FAM159B chr5 63986324 + Exonic hg19 UCEC TCGA-AP-A0LJ-01A 3 0 CDS-5'UTR Inter-chr q34.3 q12.3 55519 ChimerSeq STARFusion TCGA_RNA-Seq RPL27-CCDC57 RPL27 chr17 41154760 + CCDC57 chr17 80086381 - Exonic hg19 UCEC TCGA-AP-A0LJ-01A 3 0 Out-of-frame Intra-chr q21.31 q25.3 55520 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 UCEC TCGA-AP-A0LJ-01A 3 0 Out-of-frame Inter-chr p13.13 q13.1 55521 ChimerSeq STARFusion TCGA_RNA-Seq PEAK1-ANGPT1 PEAK1 chr15 77544709 - ANGPT1 chr8 108359325 - Exonic hg19 UCEC TCGA-AJ-A3IA-01A 10 15 5'UTR-5'UTR Inter-chr q24.3 q23.1 Seq+ 55522 ChimerSeq STARFusion TCGA_RNA-Seq SLC26A6-CYP2C8 SLC26A6 chr3 48672804 - CYP2C8 chr10 96798795 - Exonic hg19 UCEC TCGA-AJ-A3IA-01A 6 25 Out-of-frame Inter-chr p21.31 q23.33 Seq+ 55523 ChimerSeq STARFusion TCGA_RNA-Seq PCMT1-SLC22A2 PCMT1 chr6 150094305 + SLC22A2 chr6 160592469 - Exonic hg19 UCEC TCGA-AJ-A3IA-01A 6 12 CDS-3'UTR Intra-chr q25.1 q25.3 Seq+ 55524 ChimerSeq STARFusion TCGA_RNA-Seq BTBD3-CCDC126 BTBD3 chr20 11871602 + CCDC126 chr7 23682550 + Exonic hg19 UCEC TCGA-AJ-A3IA-01A 4 16 5'UTR-CDS Inter-chr p12.2 p15.3 Seq+ 55525 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-PDE7B ESR1 chr6 152129499 + PDE7B chr6 136429869 + Exonic hg19 UCEC TCGA-AJ-A3IA-01A 3 11 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q23.3 Seq+ 55526 ChimerSeq STARFusion TCGA_RNA-Seq CEP350-HHAT CEP350 chr1 180003217 + HHAT chr1 210761242 + Exonic hg19 UCEC TCGA-AJ-A3IA-01A 4 3 Out-of-frame Intra-chr q25.2 55527 ChimerSeq STARFusion TCGA_RNA-Seq CCDC126-BTBD3 CCDC126 chr7 23651172 + BTBD3 chr20 11898982 + Exonic hg19 UCEC TCGA-AJ-A3IA-01A 3 5 CDS-5'UTR Inter-chr p15.3 p12.2 Seq+ 55528 ChimerSeq STARFusion TCGA_RNA-Seq PHF3-ENPP3 PHF3 chr6 64356700 + ENPP3 chr6 131958375 + Exonic hg19 UCEC TCGA-AJ-A3IA-01A 2 9 CDS-5'UTR Intra-chr q12 q23.2 Seq+ 55529 ChimerSeq STARFusion TCGA_RNA-Seq ENDOD1-BBS1 ENDOD1 chr11 94823391 + BBS1 chr11 66288741 + Exonic hg19 UCEC TCGA-AJ-A3IA-01A 3 4 In-Frame Intra-chr q21 q13.2 Seq+ 55530 ChimerSeq STARFusion TCGA_RNA-Seq SENP6-KATNA1 SENP6 chr6 76357517 + KATNA1 chr6 149959696 - Exonic hg19 UCEC TCGA-AJ-A3IA-01A 2 6 CDS-5'UTR Intra-chr q14.1 q25.1 Seq+ 55531 ChimerSeq STARFusion TCGA_RNA-Seq UGT1A6-MROH2A UGT1A6 chr2 234602511 + MROH2A chr2 234737276 + Exonic hg19 UCEC TCGA-AJ-A3IA-01A 3 1 Out-of-frame Intra-chr q37.1 q37.1 55532 ChimerSeq STARFusion TCGA_RNA-Seq ELOVL2-SMOC2 ELOVL2 chr6 11044461 - SMOC2 chr6 169051361 + Exonic hg19 UCEC TCGA-AJ-A3IA-01A 2 4 Out-of-frame Intra-chr p24.2 q27 Seq+ 55533 ChimerSeq STARFusion TCGA_RNA-Seq FAM135A-GPR114 FAM135A chr6 71212494 + GPR114 chr16 57595968 + Exonic hg19 UCEC TCGA-AJ-A3IA-01A 2 4 CDS-5'UTR Inter-chr q13 Seq+ 55534 ChimerSeq STARFusion TCGA_RNA-Seq FOXK2-NARF FOXK2 chr17 80542064 + NARF chr17 80441592 + Exonic hg19 UCEC TCGA-AJ-A3IA-01A 2 3 In-Frame Intra-chr q25.3 Transcription factor q25.3 Seq+ 55535 ChimerSeq STARFusion TCGA_RNA-Seq BTBD3-FAM221A BTBD3 chr20 11871602 + FAM221A chr7 23728888 + Exonic hg19 UCEC TCGA-AJ-A3IA-01A 2 2 5'UTR-CDS Inter-chr p12.2 p15.3 Seq+ 55536 ChimerSeq STARFusion TCGA_RNA-Seq BSG-TCF3 BSG chr19 572701 + TCF3 chr19 1627425 - Exonic hg19 UCEC TCGA-AJ-A3IA-01A 2 1 In-Frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Transcription factor 55537 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPA2B1-YBX3 HNRNPA2B1 chr7 26231464 - YBX3 chr12 10851825 - Exonic hg19 UCEC TCGA-AP-A1E3-01A 4 0 Out-of-frame Inter-chr p15.2 p13.2 Transcription factor 55538 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-PIPOX TAOK1 chr17 27718042 + PIPOX chr17 27371877 + Exonic hg19 UCEC TCGA-FI-A2EU-01A 20 0 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 55539 ChimerSeq STARFusion TCGA_RNA-Seq MATR3-UBE2D2 MATR3 chr5 138655190 + UBE2D2 chr5 138979957 + Exonic hg19 UCEC TCGA-FI-A2EU-01A 19 0 In-Frame Intra-chr q31.2 q31.2 Seq+ 55540 ChimerSeq STARFusion TCGA_RNA-Seq TAOK1-PIPOX TAOK1 chr17 27718042 + PIPOX chr17 27367701 + Exonic hg19 UCEC TCGA-FI-A2EU-01A 10 0 5'UTR-5'UTR Intra-chr q11.2 q11.2 Seq+ 55541 ChimerSeq STARFusion TCGA_RNA-Seq GRK6-FAF2 GRK6 chr5 176853898 + FAF2 chr5 175913356 + Exonic hg19 UCEC TCGA-FI-A2EU-01A 8 0 Out-of-frame Intra-chr q35.3 q35.2 Seq+ 55542 ChimerSeq STARFusion TCGA_RNA-Seq ARNT-CDC42SE1 ARNT chr1 150818739 - CDC42SE1 chr1 151029262 - Exonic hg19 UCEC TCGA-FI-A2EU-01A 7 0 CDS-5'UTR Intra-chr q21.3 Oncogene Transcription factor q21.3 55543 ChimerSeq STARFusion TCGA_RNA-Seq HSPA1B-C2 HSPA1B chr6 31797549 + C2 chr6 31868874 + Exonic hg19 UCEC TCGA-FI-A2EU-01A 5 0 Out-of-frame Intra-chr p21.33 55544 ChimerSeq STARFusion TCGA_RNA-Seq NAIP-IFI27 NAIP chr5 70281590 - IFI27 chr14 94582131 + Exonic hg19 UCEC TCGA-FI-A2EU-01A 5 0 Out-of-frame Inter-chr q13.2 q32.12 55545 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 UCEC TCGA-FI-A2EU-01A 4 0 Out-of-frame Inter-chr p22.1 55546 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK2-PLA2G2A MAPKAPK2 chr1 206858853 + PLA2G2A chr1 20305372 - Exonic hg19 UCEC TCGA-EO-A1Y7-01A 73 136 CDS-5'UTR Intra-chr q32.1 CAMK:MAPKAPK p36.13 Tumor suppressor gene Seq+ 55547 ChimerSeq STARFusion TCGA_RNA-Seq PEX11A-MESP1 PEX11A chr15 90233808 - MESP1 chr15 90293458 - Exonic hg19 UCEC TCGA-EO-A1Y7-01A 50 147 Out-of-frame Intra-chr q26.1 q26.1 Transcription factor Seq+ 55548 ChimerSeq STARFusion TCGA_RNA-Seq PTPN4-PCDP1 PTPN4 chr2 120567567 + PCDP1 chr2 120409550 + Exonic hg19 UCEC TCGA-EO-A1Y7-01A 14 49 Out-of-frame Intra-chr q14.2 Seq+ 55549 ChimerSeq STARFusion TCGA_RNA-Seq SKP2-EXOSC10 SKP2 chr5 36153144 + EXOSC10 chr1 11132228 - Exonic hg19 UCEC TCGA-EO-A1Y7-01A 4 43 Out-of-frame Inter-chr p13.2 Tumor suppressor gene p36.22 Seq+ 55550 ChimerSeq STARFusion TCGA_RNA-Seq WDR59-CFDP1 WDR59 chr16 74919551 - CFDP1 chr16 75339080 - Exonic hg19 UCEC TCGA-EO-A1Y7-01A 3 35 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 55551 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1A1-PDE6A CSNK1A1 chr5 148929638 - PDE6A chr5 149279087 - Exonic hg19 UCEC TCGA-EO-A1Y7-01A 6 18 Out-of-frame Intra-chr q32 Tumor suppressor gene q32 Seq+ 55552 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPC-OR5AU1 HNRNPC chr14 21731470 - OR5AU1 chr14 21624045 - Exonic hg19 UCEC TCGA-EO-A1Y7-01A 5 15 5'UTR-CDS Intra-chr q11.2 q11.2 55553 ChimerSeq STARFusion TCGA_RNA-Seq COL14A1-DEPTOR COL14A1 chr8 121170485 + DEPTOR chr8 121013764 + Exonic hg19 UCEC TCGA-EO-A1Y7-01A 2 26 In-Frame Intra-chr q24.12 q24.12 Seq+ 55554 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-SNRNP40 PUM1 chr1 31532051 - SNRNP40 chr1 31744346 - Exonic hg19 UCEC TCGA-EO-A1Y7-01A 5 10 In-Frame Intra-chr p35.2 p35.2 Seq+ 55555 ChimerSeq STARFusion TCGA_RNA-Seq MECOM-LRRC34 MECOM chr3 169381124 - LRRC34 chr3 169526533 - Exonic hg19 UCEC TCGA-EO-A1Y7-01A 5 9 In-Frame Intra-chr q26.2 Transcription factor q26.2 Seq+ 55556 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPC-OR5AU1 HNRNPC chr14 21730760 - OR5AU1 chr14 21624045 - Exonic hg19 UCEC TCGA-EO-A1Y7-01A 3 15 Out-of-frame Intra-chr q11.2 q11.2 55557 ChimerSeq STARFusion TCGA_RNA-Seq FPGS-GARNL3 FPGS chr9 130575602 + GARNL3 chr9 130145717 + Exonic hg19 UCEC TCGA-EO-A1Y7-01A 4 6 In-Frame Intra-chr q34.11 q33.3 Seq+ 55558 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R16A-SLC52A2 PPP1R16A chr8 145703510 + SLC52A2 chr8 145582844 + Exonic hg19 UCEC TCGA-EO-A1Y7-01A 2 11 5'UTR-5'UTR Intra-chr q24.3 q24.3 Seq+ 55559 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-DEFB123 TPX2 chr20 30359485 + DEFB123 chr20 30037832 + Exonic hg19 UCEC TCGA-EO-A1Y7-01A 3 7 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 55560 ChimerSeq STARFusion TCGA_RNA-Seq MYL6-SMARCC2 MYL6 chr12 56556115 + SMARCC2 chr12 56572840 - Exonic hg19 UCEC TCGA-EO-A1Y7-01A 2 6 3'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 55561 ChimerSeq STARFusion TCGA_RNA-Seq TRAIP-MST1 TRAIP chr3 49884958 - MST1 chr3 49723165 - Exonic hg19 UCEC TCGA-EO-A1Y7-01A 2 2 Out-of-frame Intra-chr p21.31 p21.31 STE:STE20 Tumor suppressor gene Seq+ 55562 ChimerSeq STARFusion TCGA_RNA-Seq TRAIP-MST1 TRAIP chr3 49884958 - MST1 chr3 49723395 - Exonic hg19 UCEC TCGA-EO-A1Y7-01A 2 2 Out-of-frame Intra-chr p21.31 p21.31 STE:STE20 Tumor suppressor gene Seq+ 55563 ChimerSeq STARFusion TCGA_RNA-Seq ATAD3C-SAMD11 ATAD3C chr1 1398088 + SAMD11 chr1 865535 + Exonic hg19 UCEC TCGA-EO-A1Y7-01A 2 1 In-Frame Intra-chr p36.33 p36.33 55564 ChimerSeq STARFusion TCGA_RNA-Seq DCLRE1C-FAM171A1 DCLRE1C chr10 14974853 - FAM171A1 chr10 15290814 - Exonic hg19 UCEC TCGA-EO-A1Y7-01A 2 1 Out-of-frame Intra-chr p13 p13 55565 ChimerSeq STARFusion TCGA_RNA-Seq PPAP2A-DHX29 PPAP2A chr5 54830400 - DHX29 chr5 54558760 - Exonic hg19 UCEC TCGA-EO-A1Y7-01A 2 1 Out-of-frame Intra-chr q11.2 55566 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC10-RPL31P50 DNAJC10 chr2 183653145 + RPL31P50 chr12 31750085 - Exonic hg19 UCEC TCGA-EO-A22S-01A 5 0 Out-of-frame Inter-chr q32.1 p11.21 55567 ChimerSeq STARFusion TCGA_RNA-Seq HN1-RECQL5 HN1 chr17 73150437 - RECQL5 chr17 73627748 - Exonic hg19 UCEC TCGA-KP-A3W1-01A 17 96 In-Frame Intra-chr q25.1 Seq+ 55568 ChimerSeq STARFusion TCGA_RNA-Seq TNFSF10-NCEH1 TNFSF10 chr3 172241043 - NCEH1 chr3 172365904 - Exonic hg19 UCEC TCGA-KP-A3W1-01A 3 8 In-Frame Intra-chr q26.31 q26.31 Seq+ 55569 ChimerSeq STARFusion TCGA_RNA-Seq WDR27-HDDC2 WDR27 chr6 169982932 - HDDC2 chr6 125541298 - Exonic hg19 UCEC TCGA-KP-A3W1-01A 3 8 CDS-3'UTR Intra-chr q27 q22.31 Seq+ 55570 ChimerSeq STARFusion TCGA_RNA-Seq MTND4P12-MTATP6P1 MTND4P12 chr5 134263509 - MTATP6P1 chr1 569208 + Exonic hg19 UCEC TCGA-KP-A3W1-01A 4 2 Out-of-frame Inter-chr q31.1 p36.33 55571 ChimerSeq STARFusion TCGA_RNA-Seq IGHGP-MTATP6P1 IGHGP chr14 106135014 - MTATP6P1 chr1 569174 + Exonic hg19 UCEC TCGA-KP-A3W1-01A 3 1 Out-of-frame Inter-chr p36.33 55572 ChimerSeq STARFusion TCGA_RNA-Seq BAZ1B-BCL7B BAZ1B chr7 72879769 - BCL7B chr7 72957974 - Exonic hg19 UCEC TCGA-KP-A3W1-01A 2 1 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 55573 ChimerSeq STARFusion TCGA_RNA-Seq HEPHL1-PANX1 HEPHL1 chr11 93800909 + PANX1 chr11 93862494 + Exonic hg19 UCEC TCGA-D1-A16N-01A 7 0 Out-of-frame Intra-chr q21 q21 55574 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC1-SFTPD DNAJC1 chr10 22217969 - SFTPD chr10 81706418 - Exonic hg19 UCEC TCGA-D1-A16N-01A 5 0 CDS-5'UTR Intra-chr p12.31 q22.3 55575 ChimerSeq STARFusion TCGA_RNA-Seq BST2-ETV5 BST2 chr19 17513821 - ETV5 chr3 185826706 - Exonic hg19 UCEC TCGA-A5-A0GJ-01A 3 0 Out-of-frame Inter-chr p13.11 q27.2 Oncogene Transcription factor 55576 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-NEU1 ZBTB12 chr6 31868874 - NEU1 chr6 31827091 - Exonic hg19 UCEC TCGA-A5-A0GJ-01A 3 0 Out-of-frame Intra-chr p21.33 Transcription factor 55577 ChimerSeq STARFusion TCGA_RNA-Seq COASY-IGHA1 COASY chr17 40714608 + IGHA1 chr14 106175004 - Exonic hg19 UCEC TCGA-D1-A16X-01A 8 0 Out-of-frame Inter-chr q21.2 55578 ChimerSeq STARFusion TCGA_RNA-Seq SPTAN1-GLE1 SPTAN1 chr9 131337624 + GLE1 chr9 131284947 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 32 81 In-Frame Intra-chr q34.11 q34.11 Seq+ 55579 ChimerSeq STARFusion TCGA_RNA-Seq MAL2-COLEC10 MAL2 chr8 120233997 + COLEC10 chr8 120101919 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 23 86 Out-of-frame Intra-chr q24.12 q24.12 55580 ChimerSeq STARFusion TCGA_RNA-Seq MTMR3-CLIP2 MTMR3 chr22 30279348 + CLIP2 chr7 73811404 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 27 36 5'UTR-CDS Inter-chr q12.2 q11.23 Seq+ 55581 ChimerSeq STARFusion TCGA_RNA-Seq SUSD4-DEGS1 SUSD4 chr1 223536620 - DEGS1 chr1 224377279 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 17 25 In-Frame Intra-chr q41 q42.11 Seq+ 55582 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-CNIH4 ERBB2 chr17 37866734 + CNIH4 chr1 224553581 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 7 58 Out-of-frame Inter-chr q12 Oncogene q42.11 Seq+ 55583 ChimerSeq STARFusion TCGA_RNA-Seq NVL-SUSD4 NVL chr1 224517773 - SUSD4 chr1 223442017 - Exonic hg19 UCEC TCGA-D1-A3JP-01A 11 42 Out-of-frame Intra-chr q42.11 q41 Seq+ 55584 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-CNIH4 ERBB2 chr17 37866134 + CNIH4 chr1 224553581 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 5 58 Out-of-frame Inter-chr q12 Oncogene q42.11 Seq+ 55585 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-CNIH4 ERBB2 chr17 37863394 + CNIH4 chr1 224553581 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 5 58 In-Frame Inter-chr q12 Oncogene q42.11 Seq+ 55586 ChimerSeq STARFusion TCGA_RNA-Seq B3GNT3-INSL3 B3GNT3 chr19 17906015 + INSL3 chr19 17927868 - Exonic hg19 UCEC TCGA-D1-A3JP-01A 11 19 5'UTR-CDS Intra-chr p13.11 p13.11 Seq+ 55587 ChimerSeq STARFusion TCGA_RNA-Seq AHDC1-TAF12 AHDC1 chr1 27929908 - TAF12 chr1 28944542 - Exonic hg19 UCEC TCGA-D1-A3JP-01A 5 36 5'UTR-CDS Intra-chr p35.3 Transcription factor p35.3 Seq+ 55588 ChimerSeq STARFusion TCGA_RNA-Seq TXNRD2-RTN4R TXNRD2 chr22 19918553 - RTN4R chr22 20230633 - Exonic hg19 UCEC TCGA-D1-A3JP-01A 9 12 In-Frame Intra-chr q11.21 q11.21 Seq+ 55589 ChimerSeq STARFusion TCGA_RNA-Seq TMEM123-MMP10 TMEM123 chr11 102319543 - MMP10 chr11 102650092 - Exonic hg19 UCEC TCGA-D1-A3JP-01A 5 25 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 55590 ChimerSeq STARFusion TCGA_RNA-Seq BPTF-RAD17 BPTF chr17 65871860 + RAD17 chr5 68692224 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 5 21 Out-of-frame Inter-chr q24.2 Transcription factor Seq+ 55591 ChimerSeq STARFusion TCGA_RNA-Seq ABLIM1-PDE6B ABLIM1 chr10 116286419 - PDE6B chr4 628466 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 3 27 5'UTR-CDS Inter-chr q25.3 p16.3 Seq+ 55592 ChimerSeq STARFusion TCGA_RNA-Seq TRABD2B-SKINTL TRABD2B chr1 48459706 - SKINTL chr1 48562262 - Exonic hg19 UCEC TCGA-D1-A3JP-01A 4 16 Out-of-frame Intra-chr p33 55593 ChimerSeq STARFusion TCGA_RNA-Seq SMG1-EMC8 SMG1 chr16 18856751 - EMC8 chr16 85805497 - Exonic hg19 UCEC TCGA-D1-A3JP-01A 4 14 Out-of-frame Intra-chr p12.3 Atypical:PIKK q24.1 Seq+ 55594 ChimerSeq STARFusion TCGA_RNA-Seq BPTF-RAD17 BPTF chr17 65871136 + RAD17 chr5 68692224 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 2 21 Out-of-frame Inter-chr q24.2 Transcription factor Seq+ 55595 ChimerSeq STARFusion TCGA_RNA-Seq PGS1-CXCR5 PGS1 chr17 76395618 + CXCR5 chr11 118754561 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 3 16 CDS-5'UTR Inter-chr q25.3 q23.3 Seq+ 55596 ChimerSeq STARFusion TCGA_RNA-Seq PGS1-CXCR5 PGS1 chr17 76395618 + CXCR5 chr11 118764305 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 3 16 Out-of-frame Inter-chr q25.3 q23.3 Seq+ 55597 ChimerSeq STARFusion TCGA_RNA-Seq TRABD2B-SKINTL TRABD2B chr1 48459706 - SKINTL chr1 48593693 - Exonic hg19 UCEC TCGA-D1-A3JP-01A 2 16 Out-of-frame Intra-chr p33 55598 ChimerSeq STARFusion TCGA_RNA-Seq DCAF15-CEBPG DCAF15 chr19 14065473 + CEBPG chr19 33870050 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 3 11 CDS-5'UTR Intra-chr p13.12 q13.11 Transcription factor Seq+ 55599 ChimerSeq STARFusion TCGA_RNA-Seq NACC1-TDRD12 NACC1 chr19 13229268 + TDRD12 chr19 33281437 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 5 2 5'UTR-CDS Intra-chr p13.13 q13.11 Seq+ 55600 ChimerSeq STARFusion TCGA_RNA-Seq PEPD-CEBPG PEPD chr19 33902578 - CEBPG chr19 33870050 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 3 10 CDS-5'UTR Intra-chr q13.11 q13.11 Transcription factor Seq+ 55601 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R16A-MROH1 PPP1R16A chr8 145722836 + MROH1 chr8 145254025 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 3 9 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 55602 ChimerSeq STARFusion TCGA_RNA-Seq ORMDL3-PPP1R1B ORMDL3 chr17 38080283 - PPP1R1B chr17 37785423 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 2 10 In-Frame Intra-chr q21.1 q12 Tumor suppressor gene Seq+ 55603 ChimerSeq STARFusion TCGA_RNA-Seq NVL-ZPBP2 NVL chr1 224455736 - ZPBP2 chr17 38026947 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 3 3 In-Frame Inter-chr q42.11 q21.1 Seq+ 55604 ChimerSeq STARFusion TCGA_RNA-Seq POLR2F-MICALL1 POLR2F chr22 38381229 + MICALL1 chr22 38336716 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 2 6 3'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 55605 ChimerSeq STARFusion TCGA_RNA-Seq MACF1-NDUFS5 MACF1 chr1 39571389 + NDUFS5 chr1 39494395 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 2 4 CDS-5'UTR Intra-chr p34.3 p34.3 55606 ChimerSeq STARFusion TCGA_RNA-Seq STT3A-GCSH STT3A chr11 125489999 + GCSH chr16 81116567 - Exonic hg19 UCEC TCGA-BS-A0UT-01A 3 0 Out-of-frame Inter-chr q24.2 q23.2 55607 ChimerSeq STARFusion TCGA_RNA-Seq STT3A-NDUFS1 STT3A chr11 125489999 + NDUFS1 chr2 206980930 - Exonic hg19 UCEC TCGA-BS-A0UT-01A 3 0 Out-of-frame Inter-chr q24.2 55608 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2B-PITPNC1 PRRC2B chr9 134323191 + PITPNC1 chr17 65671595 + Exonic hg19 UCEC TCGA-AX-A1C8-01A 40 0 Out-of-frame Inter-chr q34.13 q24.2 55609 ChimerSeq STARFusion TCGA_RNA-Seq AHDC1-NUP214 AHDC1 chr1 27861273 - NUP214 chr9 134107671 + Exonic hg19 UCEC TCGA-AX-A1C8-01A 6 0 3'UTR-CDS Inter-chr p35.3 Transcription factor q34.13 Oncogene 55610 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R2-MPV17 PPP6R2 chr22 50862043 + MPV17 chr2 27535941 - Exonic hg19 UCEC TCGA-AX-A1C8-01A 6 0 Out-of-frame Inter-chr q13.33 p23.3 55611 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2-NOL12 ERBB2 chr17 37884523 + NOL12 chr22 38077874 + Exonic hg19 UCEC TCGA-EY-A54A-01A 59 74 Out-of-frame Inter-chr q12 Oncogene q13.1 Seq+ 55612 ChimerSeq STARFusion TCGA_RNA-Seq MRPL50-TMEM246 MRPL50 chr9 104160783 - TMEM246 chr9 104251482 - Exonic hg19 UCEC TCGA-EY-A54A-01A 8 31 CDS-5'UTR Intra-chr q31.1 q31.1 Seq+ 55613 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT5-SPATA2 B4GALT5 chr20 48273105 - SPATA2 chr20 48525129 - Exonic hg19 UCEC TCGA-EY-A54A-01A 6 34 CDS-5'UTR Intra-chr q13.13 q13.13 Seq+ 55614 ChimerSeq STARFusion TCGA_RNA-Seq NOL12-STARD3 NOL12 chr22 38084022 + STARD3 chr17 37809734 + Exonic hg19 UCEC TCGA-EY-A54A-01A 2 33 CDS-5'UTR Inter-chr q13.1 q12 Seq+ 55615 ChimerSeq STARFusion TCGA_RNA-Seq GUK1-ARF1 GUK1 chr1 228334639 + ARF1 chr1 228285553 + Exonic hg19 UCEC TCGA-EY-A54A-01A 6 16 Out-of-frame Intra-chr q42.13 q42.13 Tumor suppressor gene Seq+ 55616 ChimerSeq STARFusion TCGA_RNA-Seq DDX46-SEC24A DDX46 chr5 134126242 + SEC24A chr5 134010305 + Exonic hg19 UCEC TCGA-EY-A54A-01A 3 15 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 55617 ChimerSeq STARFusion TCGA_RNA-Seq GANAB-SLC22A8 GANAB chr11 62396241 - SLC22A8 chr11 62768295 - Exonic hg19 UCEC TCGA-EY-A54A-01A 2 18 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q12.3 Seq+ 55618 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125718 - CXCL16 chr17 4637332 - Exonic hg19 UCEC TCGA-EY-A54A-01A 4 8 Out-of-frame Inter-chr q12.2 p13.2 55619 ChimerSeq STARFusion TCGA_RNA-Seq HENMT1-MYBPHL HENMT1 chr1 109197338 - MYBPHL chr1 109840879 - Exonic hg19 UCEC TCGA-EY-A54A-01A 2 10 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 55620 ChimerSeq STARFusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890980 - BCAR4 chr16 11914154 - Exonic hg19 UCEC TCGA-EY-A54A-01A 2 5 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 55621 ChimerSeq STARFusion TCGA_RNA-Seq METTL13-DNM3 METTL13 chr1 171783163 + DNM3 chr1 171890888 + Exonic hg19 UCEC TCGA-EY-A54A-01A 2 1 3'UTR-CDS Intra-chr q24.3 q24.3 55622 ChimerSeq STARFusion TCGA_RNA-Seq SZT2-WDR65 SZT2 chr1 43869445 + WDR65 chr1 43719648 + Exonic hg19 UCEC TCGA-EY-A54A-01A 2 1 Out-of-frame Intra-chr p34.2 55623 ChimerSeq STARFusion TCGA_RNA-Seq METTL16-RTN4RL1 METTL16 chr17 2341403 - RTN4RL1 chr17 1841102 - Exonic hg19 UCEC TCGA-D1-A3DH-01A 7 35 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 55624 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125718 - CXCL16 chr17 4637332 - Exonic hg19 UCEC TCGA-D1-A3DH-01A 5 24 Out-of-frame Inter-chr q12.2 p13.2 55625 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125699 - CXCL16 chr17 4637313 - Exonic hg19 UCEC TCGA-D1-A3DH-01A 3 24 Out-of-frame Inter-chr q12.2 p13.2 55626 ChimerSeq STARFusion TCGA_RNA-Seq PTPRK-MTRF1L PTPRK chr6 128718711 - MTRF1L chr6 153312456 - Exonic hg19 UCEC TCGA-D1-A3DH-01A 3 22 In-Frame Intra-chr Tumor suppressor gene q25.2 Seq+ 55627 ChimerSeq STARFusion TCGA_RNA-Seq ITPR1-BHLHE40 ITPR1 chr3 4808394 + BHLHE40 chr3 5024521 + Exonic hg19 UCEC TCGA-D1-A3DH-01A 5 8 In-Frame Intra-chr p26.1 p26.1 Transcription factor Seq+ 55628 ChimerSeq STARFusion TCGA_RNA-Seq TULP4-RPS12 TULP4 chr6 158735300 + RPS12 chr6 133135871 + Exonic hg19 UCEC TCGA-D1-A3DH-01A 3 16 CDS-5'UTR Intra-chr q25.3 q23.2 Seq+ 55629 ChimerSeq STARFusion TCGA_RNA-Seq CACNG5-PRKCA CACNG5 chr17 64831368 + PRKCA chr17 64770105 + Exonic hg19 UCEC TCGA-D1-A3DH-01A 2 4 5'UTR-CDS Intra-chr q24.2 q24.2 Seq+ 55630 ChimerSeq STARFusion TCGA_RNA-Seq AIG1-COL8A1 AIG1 chr6 143486320 + COL8A1 chr3 99509524 + Exonic hg19 UCEC TCGA-D1-A3DH-01A 2 2 CDS-5'UTR Inter-chr q24.2 q12.1 Seq+ 55631 ChimerSeq STARFusion TCGA_RNA-Seq CELSR1-CERK CELSR1 chr22 46829290 - CERK chr22 47082536 - Exonic hg19 UCEC TCGA-B5-A1N2-01A 25 0 CDS-3'UTR Intra-chr q13.31 q13.31 Seq+ 55632 ChimerSeq STARFusion TCGA_RNA-Seq VRK3-CBLC VRK3 chr19 50504047 - CBLC chr19 45296731 + Exonic hg19 UCEC TCGA-B5-A1N2-01A 20 0 In-Frame Intra-chr q13.33 CK1:VRK q13.32 Seq+ 55633 ChimerSeq STARFusion TCGA_RNA-Seq PPA1-LRRC20 PPA1 chr10 71973219 - LRRC20 chr10 72100458 - Exonic hg19 UCEC TCGA-B5-A1N2-01A 13 0 In-Frame Intra-chr q22.1 q22.1 Seq+ 55634 ChimerSeq STARFusion TCGA_RNA-Seq RAB5C-DDC8 RAB5C chr17 40306911 - DDC8 chr17 76867088 - Exonic hg19 UCEC TCGA-B5-A1N2-01A 10 0 Out-of-frame Intra-chr q21.2 55635 ChimerSeq STARFusion TCGA_RNA-Seq RAB5C-TIMP2 RAB5C chr17 40306911 - TIMP2 chr17 76867088 - Exonic hg19 UCEC TCGA-B5-A1N2-01A 10 0 5'UTR-CDS Intra-chr q21.2 q25.3 Seq+ 55636 ChimerSeq STARFusion TCGA_RNA-Seq CLPTM1-ZNF570 CLPTM1 chr19 45480717 + ZNF570 chr19 37974781 + Exonic hg19 UCEC TCGA-B5-A1N2-01A 9 0 In-Frame Intra-chr q13.32 q13.12 Transcription factor Seq+ 55637 ChimerSeq STARFusion TCGA_RNA-Seq KIRREL-TEX35 KIRREL chr1 158047930 + TEX35 chr1 178489507 + Exonic hg19 UCEC TCGA-B5-A1N2-01A 9 0 Out-of-frame Intra-chr q23.1 q25.2 55638 ChimerSeq STARFusion TCGA_RNA-Seq NPLOC4-CYTH2 NPLOC4 chr17 79555969 - CYTH2 chr19 48981324 + Exonic hg19 UCEC TCGA-B5-A1N2-01A 8 0 Out-of-frame Inter-chr q25.3 q13.33 55639 ChimerSeq STARFusion TCGA_RNA-Seq SMURF2-PVRL2 SMURF2 chr17 62657947 - PVRL2 chr19 45385468 + Exonic hg19 UCEC TCGA-B5-A1N2-01A 8 0 In-Frame Inter-chr q24.1 Seq+ 55640 ChimerSeq STARFusion TCGA_RNA-Seq FOXK2-CCR7 FOXK2 chr17 80529746 + CCR7 chr17 38715194 - Exonic hg19 UCEC TCGA-B5-A1N2-01A 7 0 Out-of-frame Intra-chr q25.3 Transcription factor q21.2 55641 ChimerSeq STARFusion TCGA_RNA-Seq UPF1-FOXK2 UPF1 chr19 18963017 + FOXK2 chr17 80541891 + Exonic hg19 UCEC TCGA-B5-A1N2-01A 6 0 Out-of-frame Inter-chr p13.11 q25.3 Transcription factor 55642 ChimerSeq STARFusion TCGA_RNA-Seq TNNC1-IGH@ TNNC1 chr3 52485522 - IGH@ chr14 106330845 - Exonic hg19 UCEC TCGA-BS-A0TA-01A 12 0 Out-of-frame Inter-chr p21.1 32.33 55643 ChimerSeq STARFusion TCGA_RNA-Seq TNNC1-IGHJ3 TNNC1 chr3 52485522 - IGHJ3 chr14 106330845 - Exonic hg19 UCEC TCGA-BS-A0TA-01A 12 0 Out-of-frame Inter-chr p21.1 q32.33 55644 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-TNNC1 IGH@ chr14 106757655 - TNNC1 chr3 52485547 - Exonic hg19 UCEC TCGA-BS-A0TA-01A 4 0 Out-of-frame Inter-chr 32.33 p21.1 55645 ChimerSeq STARFusion TCGA_RNA-Seq GPX1-FTH1 GPX1 chr3 49395706 - FTH1 chr11 61734926 - Exonic hg19 UCEC TCGA-BS-A0U7-01A 4 0 Out-of-frame Inter-chr p21.31 q12.3 55646 ChimerSeq STARFusion TCGA_RNA-Seq TECR-PKN1 TECR chr19 14640523 + PKN1 chr19 14580153 + Exonic hg19 UCEC TCGA-A5-A3LP-01A 41 158 Out-of-frame Intra-chr p13.12 p13.12 AGC:PKN Seq+ 55647 ChimerSeq STARFusion TCGA_RNA-Seq ASH1L-IQGAP3 ASH1L chr1 155531944 - IQGAP3 chr1 156501039 - Exonic hg19 UCEC TCGA-A5-A3LP-01A 12 53 5'UTR-CDS Intra-chr q22 Transcription factor q22 Seq+ 55648 ChimerSeq STARFusion TCGA_RNA-Seq RPTOR-CD163 RPTOR chr17 78599593 + CD163 chr12 7655160 - Exonic hg19 UCEC TCGA-A5-A3LP-01A 14 17 In-Frame Inter-chr q25.3 p13.31 Seq+ 55649 ChimerSeq STARFusion TCGA_RNA-Seq ACTN1-DCAF5 ACTN1 chr14 69445669 - DCAF5 chr14 69529228 - Exonic hg19 UCEC TCGA-A5-A3LP-01A 5 16 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 55650 ChimerSeq STARFusion TCGA_RNA-Seq TMOD1-TDRD7 TMOD1 chr9 100264085 + TDRD7 chr9 100234575 + Exonic hg19 UCEC TCGA-A5-A3LP-01A 4 4 5'UTR-CDS Intra-chr q22.33 q22.33 Seq+ 55651 ChimerSeq STARFusion TCGA_RNA-Seq CCDC12-SETD2 CCDC12 chr3 46982488 - SETD2 chr3 47108608 - Exonic hg19 UCEC TCGA-A5-A3LP-01A 2 6 Out-of-frame Intra-chr p21.31 p21.31 Oncogene Tumor suppressor gene Seq+ 55652 ChimerSeq STARFusion TCGA_RNA-Seq RNH1-TOLLIP RNH1 chr11 507113 - TOLLIP chr11 1317024 - Exonic hg19 UCEC TCGA-A5-A3LP-01A 2 6 5'UTR-CDS Intra-chr Tumor suppressor gene p15.5 Seq+ 55653 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A29-WARS SLC25A29 chr14 100765179 - WARS chr14 100808908 - Exonic hg19 UCEC TCGA-A5-A3LP-01A 2 6 In-Frame Intra-chr q32.2 q32.2 Seq+ 55654 ChimerSeq STARFusion TCGA_RNA-Seq ALDH2-ACAD10 ALDH2 chr12 112241777 + ACAD10 chr12 112182447 + Exonic hg19 UCEC TCGA-A5-A3LP-01A 2 4 Out-of-frame Intra-chr q24.12 q24.12 55655 ChimerSeq STARFusion TCGA_RNA-Seq EML1-CDC27 EML1 chr14 100387214 + CDC27 chr17 45249430 - Exonic hg19 UCEC TCGA-A5-A3LP-01A 3 0 In-Frame Inter-chr q32.2 q21.32 Seq+ 55656 ChimerSeq STARFusion TCGA_RNA-Seq ELOVL2-ARMC9 ELOVL2 chr6 11044461 - ARMC9 chr2 232196505 + Exonic hg19 UCEC TCGA-A5-A3LP-01A 2 1 In-Frame Inter-chr p24.2 q37.1 55657 ChimerSeq STARFusion TCGA_RNA-Seq MIR4461-MTND4P12 MIR4461 chr5 134263805 + MTND4P12 chr5 134263684 - Exonic hg19 UCEC TCGA-BG-A186-01A 4 0 Out-of-frame Intra-chr q31.1 q31.1 55658 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G1-NCOR2 EIF4G1 chr3 184052769 + NCOR2 chr12 124824735 - Exonic hg19 UCEC TCGA-D1-A17D-01A 8 0 Out-of-frame Inter-chr q27.1 q24.31 55659 ChimerSeq STARFusion TCGA_RNA-Seq KNDC1-CRIP1 KNDC1 chr10 134996878 + CRIP1 chr14 105954667 + Exonic hg19 UCEC TCGA-D1-A16E-01A 4 0 Out-of-frame Inter-chr q26.3 q32.33 55660 ChimerSeq STARFusion TCGA_RNA-Seq NFXL1-CORIN NFXL1 chr4 47915986 - CORIN chr4 47809064 - Exonic hg19 UCEC TCGA-BK-A139-02A 146 417 Out-of-frame Intra-chr p12 Transcription factor p12 Seq+ 55661 ChimerSeq STARFusion TCGA_RNA-Seq PACSIN2-TTLL1 PACSIN2 chr22 43411027 - TTLL1 chr22 43447893 - Exonic hg19 UCEC TCGA-BK-A139-02A 38 175 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 55662 ChimerSeq STARFusion TCGA_RNA-Seq POLR2B-FIP1L1 POLR2B chr4 57845170 + FIP1L1 chr4 54308820 + Exonic hg19 UCEC TCGA-BK-A139-02A 28 200 In-Frame Intra-chr q12 q12 Seq+ 55663 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2C-FMO3 PRRC2C chr1 171454874 + FMO3 chr1 171072926 + Exonic hg19 UCEC TCGA-BK-A139-02A 28 163 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 55664 ChimerSeq STARFusion TCGA_RNA-Seq MUC1-GBA MUC1 chr1 155162577 - GBA chr1 155210508 - Exonic hg19 UCEC TCGA-BK-A139-02A 11 194 Out-of-frame Intra-chr q22 Oncogene Seq+ 55665 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2C-FMO3 PRRC2C chr1 171454874 + FMO3 chr1 171070221 + Exonic hg19 UCEC TCGA-BK-A139-02A 16 163 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 55666 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2C-FMO3 PRRC2C chr1 171454874 + FMO3 chr1 171069875 + Exonic hg19 UCEC TCGA-BK-A139-02A 3 163 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 55667 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-NADK GNB1 chr1 1822259 - NADK chr1 1696885 - Exonic hg19 UCEC TCGA-BK-A139-02A 19 27 5'UTR-5'UTR Intra-chr p36.33 p36.33 Seq+ 55668 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-CHMP1A ANKRD11 chr16 89484692 - CHMP1A chr16 89720331 - Exonic hg19 UCEC TCGA-BK-A139-02A 10 56 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 55669 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-CHMP1A ANKRD11 chr16 89484692 - CHMP1A chr16 89718054 - Exonic hg19 UCEC TCGA-BK-A139-02A 3 56 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 55670 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1737-C14orf166B KIAA1737 chr14 77564704 + C14orf166B chr14 77318708 + Exonic hg19 UCEC TCGA-BK-A139-02A 9 14 5'UTR-CDS Intra-chr Seq+ 55671 ChimerSeq STARFusion TCGA_RNA-Seq MET-CAPZA2 MET chr7 116399544 + CAPZA2 chr7 116528181 + Exonic hg19 UCEC TCGA-BK-A139-02A 6 17 In-Frame Intra-chr q31.2 TK:Met Oncogene q31.2 55672 ChimerSeq STARFusion TCGA_RNA-Seq UNK-ITGB4 UNK chr17 73781065 + ITGB4 chr17 73744922 + Exonic hg19 UCEC TCGA-BK-A139-02A 3 25 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 55673 ChimerSeq STARFusion TCGA_RNA-Seq WWP1-CPNE3 WWP1 chr8 87355159 + CPNE3 chr8 87540764 + Exonic hg19 UCEC TCGA-BK-A139-02A 5 13 5'UTR-5'UTR Intra-chr q21.3 q21.3 55674 ChimerSeq STARFusion TCGA_RNA-Seq HDAC4-UPB1 HDAC4 chr2 240274373 - UPB1 chr22 24890077 + Exonic hg19 UCEC TCGA-BK-A139-02A 5 7 CDS-5'UTR Inter-chr q37.3 q11.23 Seq+ 55675 ChimerSeq STARFusion TCGA_RNA-Seq UBA3-FRMD4B UBA3 chr3 69120686 - FRMD4B chr3 69225807 - Exonic hg19 UCEC TCGA-BK-A139-02A 2 17 Out-of-frame Intra-chr p14.1 p14.1 Seq+ 55676 ChimerSeq STARFusion TCGA_RNA-Seq WWP1-CPNE3 WWP1 chr8 87355159 + CPNE3 chr8 87527690 + Exonic hg19 UCEC TCGA-BK-A139-02A 2 13 5'UTR-5'UTR Intra-chr q21.3 q21.3 55677 ChimerSeq STARFusion TCGA_RNA-Seq SCYL1-FRMD8 SCYL1 chr11 65300276 + FRMD8 chr11 65156832 + Exonic hg19 UCEC TCGA-BK-A139-02A 2 12 Out-of-frame Intra-chr q13.1 Other:SCY1 Tumor suppressor gene q13.1 Seq+ 55678 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC1-MAP4 SMARCC1 chr3 47730877 - MAP4 chr3 47919013 - Exonic hg19 UCEC TCGA-BK-A139-02A 3 8 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 55679 ChimerSeq STARFusion TCGA_RNA-Seq STOM-GGTA1P STOM chr9 124110293 - GGTA1P chr9 124230209 - Exonic hg19 UCEC TCGA-BK-A139-02A 3 8 CDS-3'UTR Intra-chr q33.2 q33.2 55680 ChimerSeq STARFusion TCGA_RNA-Seq DLG3-UNC5D DLG3 chrX 69699114 + UNC5D chr8 35606045 + Exonic hg19 UCEC TCGA-BK-A139-02A 3 6 In-Frame Inter-chr q13.1 p12 Tumor suppressor gene Seq+ 55681 ChimerSeq STARFusion TCGA_RNA-Seq HOXB3-TCF12 HOXB3 chr17 46651199 - TCF12 chr15 57523350 + Exonic hg19 UCEC TCGA-BK-A139-02A 2 8 5'UTR-CDS Inter-chr q21.32 Transcription factor q21.3 Oncogene Transcription factor Seq+ 55682 ChimerSeq STARFusion TCGA_RNA-Seq ARHGAP21-THNSL1 ARHGAP21 chr10 25010766 - THNSL1 chr10 25310671 + Exonic hg19 UCEC TCGA-BK-A139-02A 3 2 CDS-5'UTR Intra-chr p12.1 p12.1 Seq+ 55683 ChimerSeq STARFusion TCGA_RNA-Seq PKN1-POLA2 PKN1 chr19 14544354 + POLA2 chr11 65062017 + Exonic hg19 UCEC TCGA-BK-A139-02A 3 1 In-Frame Inter-chr p13.12 AGC:PKN q13.1 Seq+ 55684 ChimerSeq STARFusion TCGA_RNA-Seq PPAPDC1B-DDHD2 PPAPDC1B chr8 38123659 - DDHD2 chr8 38117558 + Exonic hg19 UCEC TCGA-BK-A139-02A 2 5 Out-of-frame Intra-chr p11.23 Seq+ 55685 ChimerSeq STARFusion TCGA_RNA-Seq REPS2-GDPD4 REPS2 chrX 16965257 + GDPD4 chr11 76998465 - Exonic hg19 UCEC TCGA-BK-A139-02A 2 5 CDS-5'UTR Inter-chr p22.2 q13.5 55686 ChimerSeq STARFusion TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61612311 - ANK3 chr10 62374982 - Exonic hg19 UCEC TCGA-BK-A139-02A 2 3 In-Frame Intra-chr q21.2 q21.2 Seq+ 55687 ChimerSeq STARFusion TCGA_RNA-Seq STX5-WDR74 STX5 chr11 62591638 - WDR74 chr11 62607131 - Exonic hg19 UCEC TCGA-BK-A139-02A 2 2 CDS-5'UTR Intra-chr q12.3 q12.3 Seq+ 55688 ChimerSeq STARFusion TCGA_RNA-Seq HDAC6-ERAS HDAC6 chrX 48682997 + ERAS chrX 48687491 + Exonic hg19 UCEC TCGA-AX-A2H7-01A 13 0 Out-of-frame Intra-chr p11.23 p11.23 55689 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80950355 - MRPS28 chr8 80831383 - Exonic hg19 UCEC TCGA-D1-A3DA-01A 5 34 Out-of-frame Intra-chr q21.13 q21.13 55690 ChimerSeq STARFusion TCGA_RNA-Seq PTPLAD1-URM1 PTPLAD1 chr15 65851069 + URM1 chr9 131150095 + Exonic hg19 UCEC TCGA-EY-A210-01A 90 230 In-Frame Inter-chr q34.11 Seq+ 55691 ChimerSeq STARFusion TCGA_RNA-Seq MTOR-GARNL3 MTOR chr1 11217209 - GARNL3 chr9 130151183 + Exonic hg19 UCEC TCGA-EY-A210-01A 3 22 Out-of-frame Inter-chr p36.22 Oncogene q33.3 Seq+ 55692 ChimerSeq STARFusion TCGA_RNA-Seq MYO9A-GRB2 MYO9A chr15 72410021 - GRB2 chr17 73328878 - Exonic hg19 UCEC TCGA-EY-A210-01A 5 13 5'UTR-CDS Inter-chr q23 q25.1 Seq+ 55693 ChimerSeq STARFusion TCGA_RNA-Seq SPECC1L-PTPLAD1 SPECC1L chr22 24666951 + PTPLAD1 chr15 65844014 + Exonic hg19 UCEC TCGA-EY-A210-01A 4 12 5'UTR-CDS Inter-chr q11.23 Seq+ 55694 ChimerSeq STARFusion TCGA_RNA-Seq UBAP2L-CREB3L1 UBAP2L chr1 154234173 + CREB3L1 chr11 46321486 + Exonic hg19 UCEC TCGA-EY-A210-01A 2 1 Out-of-frame Inter-chr q21.3 p11.2 Tumor suppressor gene Transcription factor 55695 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A42-CRTC1 SLC25A42 chr19 19212695 + CRTC1 chr19 18853720 + Exonic hg19 UCEC TCGA-AX-A2HF-01A 5 0 Out-of-frame Intra-chr p13.11 p13.11 Oncogene 55696 ChimerSeq STARFusion TCGA_RNA-Seq RCOR3-KCNH1 RCOR3 chr1 211469095 + KCNH1 chr1 211192598 - Exonic hg19 UCEC TCGA-AX-A2HF-01A 4 0 In-Frame Intra-chr q32.2 55697 ChimerSeq STARFusion TCGA_RNA-Seq G3BP1-LMNB1 G3BP1 chr5 151151597 + LMNB1 chr5 126140468 + Exonic hg19 UCEC TCGA-AX-A3GI-01A 35 104 5'UTR-5'UTR Intra-chr q33.1 q23.2 Seq+ 55698 ChimerSeq STARFusion TCGA_RNA-Seq CMIP-SUGP2 CMIP chr16 81479146 + SUGP2 chr19 19121151 - Exonic hg19 UCEC TCGA-AX-A3GI-01A 9 29 Out-of-frame Inter-chr q23.2 p13.11 Seq+ 55699 ChimerSeq STARFusion TCGA_RNA-Seq FAM168A-PARVA FAM168A chr11 73308968 - PARVA chr11 12495292 + Exonic hg19 UCEC TCGA-AX-A3GI-01A 7 29 5'UTR-CDS Intra-chr q13.4 p15.3 Seq+ 55700 ChimerSeq STARFusion TCGA_RNA-Seq ATXN10-PGR ATXN10 chr22 46136418 + PGR chr11 100962607 - Exonic hg19 UCEC TCGA-AX-A3GI-01A 4 16 Out-of-frame Inter-chr q13.31 q22.1 Tumor suppressor gene Transcription factor Seq+ 55701 ChimerSeq STARFusion TCGA_RNA-Seq PRPF39-FANCM PRPF39 chr14 45553452 + FANCM chr14 45665375 + Exonic hg19 UCEC TCGA-AX-A3GI-01A 2 24 5'UTR-CDS Intra-chr q21.2 q21.2 Seq+ 55702 ChimerSeq STARFusion TCGA_RNA-Seq RMDN3-SMIM14 RMDN3 chr15 41043624 - SMIM14 chr4 39574083 - Exonic hg19 UCEC TCGA-AX-A3GI-01A 2 19 Out-of-frame Inter-chr q15.1 p14 Seq+ 55703 ChimerSeq STARFusion TCGA_RNA-Seq ATAD2-WDYHV1 ATAD2 chr8 124408427 - WDYHV1 chr8 124440164 + Exonic hg19 UCEC TCGA-AX-A3GI-01A 3 11 Out-of-frame Intra-chr q24.13 q24.13 Seq+ 55704 ChimerSeq STARFusion TCGA_RNA-Seq BIRC6-SLC30A6 BIRC6 chr2 32582554 + SLC30A6 chr2 32396356 + Exonic hg19 UCEC TCGA-AX-A3GI-01A 2 15 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 55705 ChimerSeq STARFusion TCGA_RNA-Seq ZMYND8-SULF2 ZMYND8 chr20 45976600 - SULF2 chr20 46331414 - Exonic hg19 UCEC TCGA-AX-A3GI-01A 2 7 In-Frame Intra-chr q13.12 q13.12 Seq+ 55706 ChimerSeq STARFusion TCGA_RNA-Seq RBBP8-HNRNPH1 RBBP8 chr18 20378450 + HNRNPH1 chr5 179050165 - Exonic hg19 UCEC TCGA-AX-A3GI-01A 2 3 5'UTR-5'UTR Inter-chr q11.2 Tumor suppressor gene q35.3 55707 ChimerSeq STARFusion TCGA_RNA-Seq MAPRE1-HM13 MAPRE1 chr20 31413854 + HM13 chr20 30102284 + Exonic hg19 UCEC TCGA-BG-A0MH-01A 7 0 CDS-5'UTR Intra-chr q11.21 q11.21 55708 ChimerSeq STARFusion TCGA_RNA-Seq GPR137B-TBCE GPR137B chr1 236306336 + TBCE chr1 235597519 + Exonic hg19 UCEC TCGA-BG-A0MH-01A 6 0 In-Frame Intra-chr q42.3 55709 ChimerSeq STARFusion TCGA_RNA-Seq KAT8-BCKDK KAT8 chr16 31131835 + BCKDK chr16 31123190 + Exonic hg19 UCEC TCGA-BG-A0MH-01A 4 0 Out-of-frame Intra-chr p11.2 p11.2 Atypical:PDHK 55710 ChimerSeq STARFusion TCGA_RNA-Seq MRPL12-HGS MRPL12 chr17 79671746 + HGS chr17 79667497 + Exonic hg19 UCEC TCGA-B5-A0JX-01A 4 0 Out-of-frame Intra-chr q25.3 q25.3 55711 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A10-HGS SLC25A10 chr17 79671746 + HGS chr17 79667497 + Exonic hg19 UCEC TCGA-B5-A0JX-01A 4 0 5'UTR-CDS Intra-chr q25.3 q25.3 Seq+ 55712 ChimerSeq STARFusion TCGA_RNA-Seq SLC25A10-HGS SLC25A10 chr17 79671746 + HGS chr17 79667497 + Exonic hg19 UCEC TCGA-B5-A0JX-01A 4 0 5'UTR-CDS Intra-chr q25.3 q25.3 Seq+ 55713 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL671P-HCG4P7 RN7SL671P chr4 1870886 - HCG4P7 chr6 29855588 - Exonic hg19 UCEC TCGA-BG-A221-01A 4 0 Out-of-frame Inter-chr 55714 ChimerSeq STARFusion TCGA_RNA-Seq CPLX2-ANKRD55 CPLX2 chr5 175309044 + ANKRD55 chr5 55407361 - Exonic hg19 UCEC TCGA-BK-A0CC-01B 8 43 Out-of-frame Intra-chr q35.2 q11.2 55715 ChimerSeq STARFusion TCGA_RNA-Seq SHROOM4-ARID3A SHROOM4 chrX 50556902 - ARID3A chr19 960092 + Exonic hg19 UCEC TCGA-BK-A0CC-01B 11 3 In-Frame Inter-chr p11.22 p13.3 Transcription factor Seq+ 55716 ChimerSeq STARFusion TCGA_RNA-Seq RN7SK-ZNF277 RN7SK chr6 52860680 + ZNF277 chr7 111928941 + Exonic hg19 UCEC TCGA-BK-A0CC-01B 3 12 Out-of-frame Inter-chr p12.2 q31.1 Transcription factor 55717 ChimerSeq STARFusion TCGA_RNA-Seq ITGAV-C19orf43 ITGAV chr2 187519435 + C19orf43 chr19 12841882 - Exonic hg19 UCEC TCGA-AP-A0LF-01A 10 0 Out-of-frame Inter-chr q32.1 Tumor suppressor gene p13.13 Seq+ 55718 ChimerSeq STARFusion TCGA_RNA-Seq CYB561-IGHGP CYB561 chr17 61523379 - IGHGP chr14 106134593 - Exonic hg19 UCEC TCGA-AP-A0LF-01A 5 0 Out-of-frame Inter-chr q23.3 55719 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-POLR2B IGH@ chr14 106494138 - POLR2B chr4 57844863 + Exonic hg19 UCEC TCGA-AP-A0LF-01A 4 0 Out-of-frame Inter-chr 32.33 q12 55720 ChimerSeq STARFusion TCGA_RNA-Seq CDS2-PCBP2 CDS2 chr20 5177910 + PCBP2 chr12 53873469 + Exonic hg19 UCEC TCGA-AP-A0LF-01A 3 0 Out-of-frame Inter-chr p12.3 q13.13 55721 ChimerSeq STARFusion TCGA_RNA-Seq CHCHD3-TMEM178B CHCHD3 chr7 132659929 - TMEM178B chr7 140912391 + Exonic hg19 UCEC TCGA-AP-A0LF-01A 3 0 Out-of-frame Intra-chr q33 Transcription factor q34 55722 ChimerSeq STARFusion TCGA_RNA-Seq HEXIM1-IGH@ HEXIM1 chr17 43224945 + IGH@ chr14 106207797 - Exonic hg19 UCEC TCGA-AP-A0LF-01A 3 0 Out-of-frame Inter-chr q21.31 32.33 55723 ChimerSeq STARFusion TCGA_RNA-Seq HEXIM1-IGHG1 HEXIM1 chr17 43224945 + IGHG1 chr14 106207797 - Exonic hg19 UCEC TCGA-AP-A0LF-01A 3 0 Out-of-frame Inter-chr q21.31 q32.33 55724 ChimerSeq STARFusion TCGA_RNA-Seq IGKC-TYRO3 IGKC chr2 89156966 - TYRO3 chr15 41854865 + Exonic hg19 UCEC TCGA-AP-A0LF-01A 3 0 Out-of-frame Inter-chr p11.2 q15.1 TK:Axl 55725 ChimerSeq STARFusion TCGA_RNA-Seq FRYL-OCIAD2 FRYL chr4 48782095 - OCIAD2 chr4 48896070 - Exonic hg19 UCEC TCGA-AJ-A2QN-01A 12 0 5'UTR-CDS Intra-chr p11 p11 Seq+ 55726 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB17-DLC1 ZBTB17 chr1 16299534 - DLC1 chr8 12973166 - Exonic hg19 UCEC TCGA-D1-A3JQ-01A 27 66 5'UTR-5'UTR Inter-chr p36.13 Transcription factor p22 Tumor suppressor gene Seq+ 55727 ChimerSeq STARFusion TCGA_RNA-Seq ADK-C10orf11 ADK chr10 76430027 + C10orf11 chr10 78316967 + Exonic hg19 UCEC TCGA-D1-A3JQ-01A 16 90 In-Frame Intra-chr q22.2 Seq+ 55728 ChimerSeq STARFusion TCGA_RNA-Seq RPL29-ACY1 RPL29 chr3 52029058 - ACY1 chr3 52020271 + Exonic hg19 UCEC TCGA-D1-A3JQ-01A 4 24 Out-of-frame Intra-chr p21.2 p21.2 Tumor suppressor gene Seq+ 55729 ChimerSeq STARFusion TCGA_RNA-Seq CDC25A-SLC26A6 CDC25A chr3 48229268 - SLC26A6 chr3 48667144 - Exonic hg19 UCEC TCGA-D1-A3JQ-01A 4 23 In-Frame Intra-chr p21.31 p21.31 Seq+ 55730 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125699 - CXCL16 chr17 4637313 - Exonic hg19 UCEC TCGA-D1-A3JQ-01A 6 13 Out-of-frame Inter-chr q12.2 p13.2 55731 ChimerSeq STARFusion TCGA_RNA-Seq PADI3-EIF4G3 PADI3 chr1 17607291 + EIF4G3 chr1 21256741 - Exonic hg19 UCEC TCGA-D1-A3JQ-01A 7 9 CDS-3'UTR Intra-chr p36.12 Seq+ 55732 ChimerSeq STARFusion TCGA_RNA-Seq TBCD-METRNL TBCD chr17 80869665 + METRNL chr17 81050912 + Exonic hg19 UCEC TCGA-D1-A3JQ-01A 5 17 In-Frame Intra-chr Seq+ 55733 ChimerSeq STARFusion TCGA_RNA-Seq TCF25-SPIRE2 TCF25 chr16 89954125 + SPIRE2 chr16 89911730 + Exonic hg19 UCEC TCGA-D1-A3JQ-01A 6 9 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 55734 ChimerSeq STARFusion TCGA_RNA-Seq WNK1-GIPC1 WNK1 chr12 863490 + GIPC1 chr19 14603724 - Exonic hg19 UCEC TCGA-D1-A3JQ-01A 2 20 CDS-5'UTR Inter-chr p13.33 p13.12 Seq+ 55735 ChimerSeq STARFusion TCGA_RNA-Seq TMTC1-PGD TMTC1 chr12 29904599 - PGD chr1 10459686 + Exonic hg19 UCEC TCGA-D1-A3JQ-01A 3 8 In-Frame Inter-chr p11.22 p36.22 Seq+ 55736 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF2-SSR2 ARHGEF2 chr1 155927504 - SSR2 chr1 155979441 - Exonic hg19 UCEC TCGA-D1-A3JQ-01A 3 7 Out-of-frame Intra-chr q22 q22 Seq+ 55737 ChimerSeq STARFusion TCGA_RNA-Seq KAZN-MTOR KAZN chr1 15251068 + MTOR chr1 11206848 - Exonic hg19 UCEC TCGA-D1-A3JQ-01A 3 6 In-Frame Intra-chr p36.21 p36.22 Oncogene Seq+ 55738 ChimerSeq STARFusion TCGA_RNA-Seq PTPRM-RAB12 PTPRM chr18 7955412 + RAB12 chr18 8624936 + Exonic hg19 UCEC TCGA-D1-A3JQ-01A 2 10 In-Frame Intra-chr p11.23 p11.22 55739 ChimerSeq STARFusion TCGA_RNA-Seq TMTC1-PGD TMTC1 chr12 29812813 - PGD chr1 10459686 + Exonic hg19 UCEC TCGA-D1-A3JQ-01A 2 8 Out-of-frame Inter-chr p11.22 p36.22 Seq+ 55740 ChimerSeq STARFusion TCGA_RNA-Seq ILF3-ZNF441 ILF3 chr19 10782211 + ZNF441 chr19 11889145 + Exonic hg19 UCEC TCGA-D1-A3JQ-01A 2 6 Out-of-frame Intra-chr p13.2 p13.2 Transcription factor Seq+ 55741 ChimerSeq STARFusion TCGA_RNA-Seq SMIM4-PBRM1 SMIM4 chr3 52570789 + PBRM1 chr3 52598249 - Exonic hg19 UCEC TCGA-D1-A3JQ-01A 3 2 Out-of-frame Intra-chr p21.1 p21.1 Oncogene Tumor suppressor gene 55742 ChimerSeq STARFusion TCGA_RNA-Seq PNPLA7-TPRN PNPLA7 chr9 140400066 - TPRN chr9 140087143 - Exonic hg19 UCEC TCGA-D1-A3JQ-01A 2 3 In-Frame Intra-chr q34.3 q34.3 Seq+ 55743 ChimerSeq STARFusion TCGA_RNA-Seq CYP4B1-FGGY CYP4B1 chr1 47280936 + FGGY chr1 60103900 + Exonic hg19 UCEC TCGA-D1-A3JQ-01A 2 1 In-Frame Intra-chr p33 p32.1 55744 ChimerSeq STARFusion TCGA_RNA-Seq SNX30-PRPF4 SNX30 chr9 115513437 + PRPF4 chr9 116038828 + Exonic hg19 UCEC TCGA-D1-A3JQ-01A 2 1 In-Frame Intra-chr q32 q32 55745 ChimerSeq STARFusion TCGA_RNA-Seq CTNNA2-REG3G CTNNA2 chr2 79878784 + REG3G chr2 79253109 + Exonic hg19 UCEC TCGA-B5-A3FD-01A 15 54 CDS-5'UTR Intra-chr p12 Tumor suppressor gene p12 Seq+ 55746 ChimerSeq STARFusion TCGA_RNA-Seq CTNNA2-REG3G CTNNA2 chr2 79878784 + REG3G chr2 79253839 + Exonic hg19 UCEC TCGA-B5-A3FD-01A 2 54 Out-of-frame Intra-chr p12 Tumor suppressor gene p12 Seq+ 55747 ChimerSeq STARFusion TCGA_RNA-Seq CTNNA2-REG3G CTNNA2 chr2 79878784 + REG3G chr2 79253209 + Exonic hg19 UCEC TCGA-B5-A3FD-01A 2 54 CDS-5'UTR Intra-chr p12 Tumor suppressor gene p12 Seq+ 55748 ChimerSeq STARFusion TCGA_RNA-Seq PFKFB4-UQCRC1 PFKFB4 chr3 48577130 - UQCRC1 chr3 48638900 - Exonic hg19 UCEC TCGA-B5-A3FD-01A 2 19 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 55749 ChimerSeq STARFusion TCGA_RNA-Seq AGBL4-FAF1 AGBL4 chr1 50489435 - FAF1 chr1 51121200 - Exonic hg19 UCEC TCGA-B5-A3FD-01A 2 7 Out-of-frame Intra-chr p33 p32.3 Seq+ 55750 ChimerSeq STARFusion TCGA_RNA-Seq POLR2B-FIP1L1 POLR2B chr4 57845170 + FIP1L1 chr4 54308820 + Exonic hg19 UCEC TCGA-BK-A139-01A 13 28 In-Frame Intra-chr q12 q12 Seq+ 55751 ChimerSeq STARFusion TCGA_RNA-Seq DLG3-UNC5D DLG3 chrX 69699114 + UNC5D chr8 35606045 + Exonic hg19 UCEC TCGA-BK-A139-01A 7 25 In-Frame Inter-chr q13.1 p12 Tumor suppressor gene Seq+ 55752 ChimerSeq STARFusion TCGA_RNA-Seq ESR1-SYNE1 ESR1 chr6 152265643 + SYNE1 chr6 152694354 - Exonic hg19 UCEC TCGA-BK-A139-01A 11 7 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.2 Oncogene Seq+ 55753 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-CHMP1A ANKRD11 chr16 89484692 - CHMP1A chr16 89720331 - Exonic hg19 UCEC TCGA-BK-A139-01A 5 17 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 55754 ChimerSeq STARFusion TCGA_RNA-Seq WWP1-CPNE3 WWP1 chr8 87355159 + CPNE3 chr8 87540764 + Exonic hg19 UCEC TCGA-BK-A139-01A 6 6 5'UTR-5'UTR Intra-chr q21.3 q21.3 55755 ChimerSeq STARFusion TCGA_RNA-Seq MET-CAPZA2 MET chr7 116399544 + CAPZA2 chr7 116528181 + Exonic hg19 UCEC TCGA-BK-A139-01A 3 6 In-Frame Intra-chr q31.2 TK:Met Oncogene q31.2 55756 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC20-MICU2 ZDHHC20 chr13 21987791 - MICU2 chr13 22084240 - Exonic hg19 UCEC TCGA-BK-A139-01A 3 5 Out-of-frame Intra-chr q12.11 q12.11 55757 ChimerSeq STARFusion TCGA_RNA-Seq MRPL48-PPME1 MRPL48 chr11 73499037 + PPME1 chr11 73914773 + Exonic hg19 UCEC TCGA-BK-A139-01A 3 3 Out-of-frame Intra-chr q13.4 q13.4 55758 ChimerSeq STARFusion TCGA_RNA-Seq UBA3-FRMD4B UBA3 chr3 69120686 - FRMD4B chr3 69225807 - Exonic hg19 UCEC TCGA-BK-A139-01A 2 7 Out-of-frame Intra-chr p14.1 p14.1 Seq+ 55759 ChimerSeq STARFusion TCGA_RNA-Seq SUZ12-NF1 SUZ12 chr17 30303633 + NF1 chr17 29576002 + Exonic hg19 UCEC TCGA-BK-A139-01A 2 4 In-Frame Intra-chr q11.2 Tumor suppressor gene q11.2 Oncogene Tumor suppressor gene Seq+ 55760 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1737-C14orf166B KIAA1737 chr14 77564704 + C14orf166B chr14 77318708 + Exonic hg19 UCEC TCGA-BK-A139-01A 2 3 5'UTR-CDS Intra-chr Seq+ 55761 ChimerSeq STARFusion TCGA_RNA-Seq SLC2A12-SGK1 SLC2A12 chr6 134349519 - SGK1 chr6 134583286 - Exonic hg19 UCEC TCGA-BK-A139-01A 2 3 Out-of-frame Intra-chr q23.2 q23.2 AGC:SGK Oncogene Seq+ 55762 ChimerSeq STARFusion TCGA_RNA-Seq TMEM241-TEX101 TMEM241 chr18 20936558 - TEX101 chr19 43906918 + Exonic hg19 UCEC TCGA-BK-A139-01A 2 0 CDS-5'UTR Inter-chr q11.2 q13.31 55763 ChimerSeq STARFusion TCGA_RNA-Seq SLC3A1-PPM1B SLC3A1 chr2 44527229 + PPM1B chr2 44459455 + Exonic hg19 UCEC TCGA-A5-A0GR-01A 19 0 In-Frame Intra-chr p21 p21 55764 ChimerSeq STARFusion TCGA_RNA-Seq GDA-EPS8L2 GDA chr9 74764598 + EPS8L2 chr11 720062 + Exonic hg19 UCEC TCGA-A5-A0GR-01A 16 0 In-Frame Inter-chr q21.13 p15.5 Seq+ 55765 ChimerSeq STARFusion TCGA_RNA-Seq ALKBH5-MYO15A ALKBH5 chr17 18098349 + MYO15A chr17 18074952 + Exonic hg19 UCEC TCGA-A5-A0GR-01A 6 0 In-Frame Intra-chr p11.2 p11.2 Seq+ 55766 ChimerSeq STARFusion TCGA_RNA-Seq COASY-IGHA1 COASY chr17 40714610 + IGHA1 chr14 106175002 - Exonic hg19 UCEC TCGA-A5-A0GR-01A 5 0 Out-of-frame Inter-chr q21.2 55767 ChimerSeq STARFusion TCGA_RNA-Seq GDA-EPS8L2 GDA chr9 74729749 + EPS8L2 chr11 720062 + Exonic hg19 UCEC TCGA-A5-A0GR-01A 5 0 5'UTR-CDS Inter-chr q21.13 p15.5 Seq+ 55768 ChimerSeq STARFusion TCGA_RNA-Seq SLC3A1-PPM1B SLC3A1 chr2 44528182 + PPM1B chr2 44458567 + Exonic hg19 UCEC TCGA-A5-A0GR-01A 4 0 Out-of-frame Intra-chr p21 p21 55769 ChimerSeq STARFusion TCGA_RNA-Seq PDE12-KCNJ4 PDE12 chr3 57545115 + KCNJ4 chr22 38824176 - Exonic hg19 UCEC TCGA-AX-A3G1-01A 2 6 CDS-5'UTR Inter-chr p14.3 q13.1 Seq+ 55770 ChimerSeq STARFusion TCGA_RNA-Seq TOX3-IGLJ3 TOX3 chr16 52472063 - IGLJ3 chr22 23247168 + Exonic hg19 UCEC TCGA-AX-A3G1-01A 3 0 Out-of-frame Inter-chr q12.1 q11.22 55771 ChimerSeq STARFusion TCGA_RNA-Seq ZNRF3-HSCB ZNRF3 chr22 29280054 + HSCB chr22 29139870 + Exonic hg19 UCEC TCGA-AX-A3G1-01A 2 4 Out-of-frame Intra-chr q12.1 q12.1 55772 ChimerSeq STARFusion TCGA_RNA-Seq ZBED4-ENO1 ZBED4 chr22 50247637 + ENO1 chr1 8934976 - Exonic hg19 UCEC TCGA-AW-A1PO-01A 5 0 5'UTR-5'UTR Inter-chr q13.33 Transcription factor p36.23 55773 ChimerSeq STARFusion TCGA_RNA-Seq ZFAND6-SEC22C ZFAND6 chr15 80352151 + SEC22C chr3 42610565 - Exonic hg19 UCEC TCGA-AW-A1PO-01A 5 0 5'UTR-5'UTR Inter-chr q25.1 p22.1 55774 ChimerSeq STARFusion TCGA_RNA-Seq CYB561-IGHGP CYB561 chr17 61523379 - IGHGP chr14 106134593 - Exonic hg19 UCEC TCGA-DI-A1BY-01A 4 0 Out-of-frame Inter-chr q23.3 55775 ChimerSeq STARFusion TCGA_RNA-Seq UCK2-GPA33 UCK2 chr1 165865569 + GPA33 chr1 167025086 - Exonic hg19 UCEC TCGA-AX-A0IW-01A 11 0 In-Frame Intra-chr q24.1 q24.1 55776 ChimerSeq STARFusion TCGA_RNA-Seq GPRC5B-KNOP1 GPRC5B chr16 19883138 - KNOP1 chr16 19726359 - Exonic hg19 UCEC TCGA-AX-A0IW-01A 6 0 Out-of-frame Intra-chr p12.3 p12.3 55777 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31802768 + C2 chr6 31868874 + Exonic hg19 UCEC TCGA-AX-A0IW-01A 3 0 Out-of-frame Intra-chr p21.33 55778 ChimerSeq STARFusion TCGA_RNA-Seq CA5B-BMX CA5B chrX 15706981 + BMX chrX 15574196 + Exonic hg19 UCEC TCGA-AX-A0IW-01A 3 0 5'UTR-CDS Intra-chr p22.2 p22.2 TK:Tec 55779 ChimerSeq STARFusion TCGA_RNA-Seq CA5BP1-BMX CA5BP1 chrX 15706981 + BMX chrX 15574196 + Exonic hg19 UCEC TCGA-AX-A0IW-01A 3 0 5'UTR-CDS Intra-chr p22.2 p22.2 TK:Tec 55780 ChimerSeq STARFusion TCGA_RNA-Seq HSPA1B-C2 HSPA1B chr6 31797538 + C2 chr6 31868873 + Exonic hg19 UCEC TCGA-AX-A0IW-01A 3 0 Out-of-frame Intra-chr p21.33 55781 ChimerSeq STARFusion TCGA_RNA-Seq KCMF1-TCF7L1 KCMF1 chr2 85198590 + TCF7L1 chr2 85510618 + Exonic hg19 UCEC TCGA-AX-A0IW-01A 3 0 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Oncogene Transcription factor 55782 ChimerSeq STARFusion TCGA_RNA-Seq TAB1-APOBEC3H TAB1 chr22 39795840 + APOBEC3H chr22 39496277 + Exonic hg19 UCEC TCGA-AX-A0IW-01A 3 0 CDS-5'UTR Intra-chr q13.1 q13.1 55783 ChimerSeq STARFusion TCGA_RNA-Seq GAPDH-MAN1C1 GAPDH chr12 6647524 + MAN1C1 chr1 26112407 + Exonic hg19 UCEC TCGA-EY-A1H0-01A 4 0 Out-of-frame Inter-chr p13.31 p36.11 55784 ChimerSeq STARFusion TCGA_RNA-Seq GGNBP2-NR1D1 GGNBP2 chr17 34941880 + NR1D1 chr17 38256519 - Exonic hg19 UCEC TCGA-BK-A26L-01A 17 0 CDS-5'UTR Intra-chr Tumor suppressor gene q21.1 Transcription factor Seq+ 55785 ChimerSeq STARFusion TCGA_RNA-Seq EPS8L2-TSPAN4 EPS8L2 chr11 706288 + TSPAN4 chr11 862550 + Exonic hg19 UCEC TCGA-BK-A26L-01A 8 0 5'UTR-5'UTR Intra-chr p15.5 p15.5 55786 ChimerSeq STARFusion TCGA_RNA-Seq SPARC-COL18A1 SPARC chr5 151055729 - COL18A1 chr21 46925136 + Exonic hg19 UCEC TCGA-BK-A26L-01A 6 0 Out-of-frame Inter-chr q33.1 Tumor suppressor gene q22.3 55787 ChimerSeq STARFusion TCGA_RNA-Seq GGNBP2-NR1D1 GGNBP2 chr17 34941880 + NR1D1 chr17 38256553 - Exonic hg19 UCEC TCGA-BK-A26L-01A 5 0 CDS-5'UTR Intra-chr Tumor suppressor gene q21.1 Transcription factor Seq+ 55788 ChimerSeq STARFusion TCGA_RNA-Seq HIP1R-DENR HIP1R chr12 123320187 + DENR chr12 123238237 + Exonic hg19 UCEC TCGA-BK-A26L-01A 5 0 Out-of-frame Intra-chr q24.31 q24.31 55789 ChimerSeq STARFusion TCGA_RNA-Seq NLGN4X-DMD NLGN4X chrX 5947321 - DMD chrX 31792309 - Exonic hg19 UCEC TCGA-BK-A26L-01A 5 0 In-Frame Intra-chr p22.31 p21.1 Tumor suppressor gene Seq+ 55790 ChimerSeq STARFusion TCGA_RNA-Seq SH3GL1-SEMA6B SH3GL1 chr19 4400321 - SEMA6B chr19 4548457 - Exonic hg19 UCEC TCGA-BK-A26L-01A 4 0 Out-of-frame Intra-chr p13.3 p13.3 55791 ChimerSeq STARFusion TCGA_RNA-Seq SRPK1-PXT1 SRPK1 chr6 35806114 - PXT1 chr6 36359651 - Exonic hg19 UCEC TCGA-BK-A26L-01A 4 0 Out-of-frame Intra-chr p21.31 CMGC:SRPK p21.31 Seq+ 55792 ChimerSeq STARFusion TCGA_RNA-Seq CCSER1-HERC3 CCSER1 chr4 91048982 + HERC3 chr4 89599115 + Exonic hg19 UCEC TCGA-EY-A1GX-01A 3 5 Out-of-frame Intra-chr q22.1 q22.1 55793 ChimerSeq STARFusion TCGA_RNA-Seq CPSF6-CHMP1A CPSF6 chr12 69656342 + CHMP1A chr16 89713739 - Exonic hg19 UCEC TCGA-EY-A1GX-01A 2 1 3'UTR-3'UTR Inter-chr q15 q24.3 Seq+ 55794 ChimerSeq STARFusion TCGA_RNA-Seq SOAT2-IGH@ SOAT2 chr12 53517616 + IGH@ chr14 106209410 - Exonic hg19 UCEC TCGA-BS-A0UM-01A 6 0 Out-of-frame Inter-chr q13.13 32.33 55795 ChimerSeq STARFusion TCGA_RNA-Seq SOAT2-IGHG1 SOAT2 chr12 53517616 + IGHG1 chr14 106209410 - Exonic hg19 UCEC TCGA-BS-A0UM-01A 6 0 Out-of-frame Inter-chr q13.13 q32.33 55796 ChimerSeq STARFusion TCGA_RNA-Seq RNF26-FOXR1 RNF26 chr11 119205328 + FOXR1 chr11 118842528 + Exonic hg19 UCEC TCGA-BK-A0CA-01A 9 44 Out-of-frame Intra-chr q23.3 Transcription factor Seq+ 55797 ChimerSeq STARFusion TCGA_RNA-Seq FBXO42-LAPTM5 FBXO42 chr1 16678750 - LAPTM5 chr1 31215396 - Exonic hg19 UCEC TCGA-AJ-A23N-01A 10 29 5'UTR-CDS Intra-chr p36.13 p35.2 Seq+ 55798 ChimerSeq STARFusion TCGA_RNA-Seq UNC5A-ERGIC1 UNC5A chr5 176237821 + ERGIC1 chr5 172377712 + Exonic hg19 UCEC TCGA-AJ-A23N-01A 7 13 Out-of-frame Intra-chr q35.2 Tumor suppressor gene q35.1 Seq+ 55799 ChimerSeq STARFusion TCGA_RNA-Seq CCSER1-MMRN1 CCSER1 chr4 91048982 + MMRN1 chr4 90815875 + Exonic hg19 UCEC TCGA-AJ-A23N-01A 3 22 Out-of-frame Intra-chr q22.1 q22.1 55800 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125699 - CXCL16 chr17 4637313 - Exonic hg19 UCEC TCGA-AJ-A23N-01A 4 15 Out-of-frame Inter-chr q12.2 p13.2 55801 ChimerSeq STARFusion TCGA_RNA-Seq LYPD6-EPC2 LYPD6 chr2 150305661 + EPC2 chr2 149447783 + Exonic hg19 UCEC TCGA-AJ-A23N-01A 7 1 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 55802 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125718 - CXCL16 chr17 4637332 - Exonic hg19 UCEC TCGA-AJ-A23N-01A 3 15 Out-of-frame Inter-chr q12.2 p13.2 55803 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1107-H19 KIAA1107 chr1 92633439 + H19 chr11 2016686 - Exonic hg19 UCEC TCGA-A5-A0G3-01A 5 0 Out-of-frame Inter-chr p22.1 p15.5 Tumor suppressor gene 55804 ChimerSeq STARFusion TCGA_RNA-Seq EDF1-FAM159B EDF1 chr9 139757358 - FAM159B chr5 63986324 + Exonic hg19 UCEC TCGA-A5-A0G3-01A 4 0 CDS-5'UTR Inter-chr q34.3 q12.3 55805 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31805166 + C2 chr6 31868874 + Exonic hg19 UCEC TCGA-A5-A0G3-01A 3 0 Out-of-frame Intra-chr p21.33 55806 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-SLC44A4 ZBTB12 chr6 31868873 - SLC44A4 chr6 31831427 - Exonic hg19 UCEC TCGA-D1-A0ZR-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 55807 ChimerSeq STARFusion TCGA_RNA-Seq ATXN10-FBLN1 ATXN10 chr22 46088958 + FBLN1 chr22 45914562 + Exonic hg19 UCEC TCGA-AX-A1CC-01A 4 0 In-Frame Intra-chr q13.31 q13.31 Tumor suppressor gene Seq+ 55808 ChimerSeq STARFusion TCGA_RNA-Seq GAPDH-MAN1C1 GAPDH chr12 6647524 + MAN1C1 chr1 26112407 + Exonic hg19 UCEC TCGA-AX-A1CC-01A 3 0 Out-of-frame Inter-chr p13.31 p36.11 55809 ChimerSeq STARFusion TCGA_RNA-Seq ARID3A-MORC2 ARID3A chr19 929896 + MORC2 chr22 31328756 - Exonic hg19 UCEC TCGA-EY-A2ON-01A 81 428 In-Frame Inter-chr p13.3 Transcription factor q12.2 Seq+ 55810 ChimerSeq STARFusion TCGA_RNA-Seq STX5-ASIP STX5 chr11 62591638 - ASIP chr20 32848171 + Exonic hg19 UCEC TCGA-EY-A2ON-01A 3 14 CDS-5'UTR Inter-chr q12.3 q11.22 Seq+ 55811 ChimerSeq STARFusion TCGA_RNA-Seq AFF1-GAST AFF1 chr4 87869723 + GAST chr17 39871684 + Exonic hg19 UCEC TCGA-EY-A2ON-01A 2 15 CDS-5'UTR Inter-chr q21.3 Oncogene q21.2 Seq+ 55812 ChimerSeq STARFusion TCGA_RNA-Seq MYH9-TXN2 MYH9 chr22 36705327 - TXN2 chr22 36863964 - Exonic hg19 UCEC TCGA-EY-A2ON-01A 3 9 Out-of-frame Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Seq+ 55813 ChimerSeq STARFusion TCGA_RNA-Seq MAPRE1-POFUT1 MAPRE1 chr20 31407834 + POFUT1 chr20 30803072 + Exonic hg19 UCEC TCGA-EY-A2ON-01A 2 7 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 55814 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-GSDMB FBXL20 chr17 37499433 - GSDMB chr17 38073574 - Exonic hg19 UCEC TCGA-B5-A5OE-01A 9 56 CDS-5'UTR Intra-chr q12 q21.1 Seq+ 55815 ChimerSeq STARFusion TCGA_RNA-Seq USP54-ANXA7 USP54 chr10 75331179 - ANXA7 chr10 75160615 - Exonic hg19 UCEC TCGA-B5-A5OE-01A 13 20 CDS-5'UTR Intra-chr q22.2 q22.2 Tumor suppressor gene Seq+ 55816 ChimerSeq STARFusion TCGA_RNA-Seq MED26-ZNF99 MED26 chr19 16738683 - ZNF99 chr19 22952126 - Exonic hg19 UCEC TCGA-B5-A5OE-01A 10 29 In-Frame Intra-chr p13.11 p12 Transcription factor Seq+ 55817 ChimerSeq STARFusion TCGA_RNA-Seq FBXL20-GSDMB FBXL20 chr17 37499433 - GSDMB chr17 38068750 - Exonic hg19 UCEC TCGA-B5-A5OE-01A 3 56 Out-of-frame Intra-chr q12 q21.1 Seq+ 55818 ChimerSeq STARFusion TCGA_RNA-Seq PVR-ZNF233 PVR chr19 45150842 + ZNF233 chr19 44768467 + Exonic hg19 UCEC TCGA-B5-A5OE-01A 9 32 CDS-5'UTR Intra-chr q13.31 q13.31 Transcription factor Seq+ 55819 ChimerSeq STARFusion TCGA_RNA-Seq HP1BP3-EIF4G3 HP1BP3 chr1 21074037 - EIF4G3 chr1 21137377 - Exonic hg19 UCEC TCGA-B5-A5OE-01A 6 28 Out-of-frame Intra-chr p36.12 p36.12 Seq+ 55820 ChimerSeq STARFusion TCGA_RNA-Seq RAD52-RIMKLB RAD52 chr12 1058768 - RIMKLB chr12 8925917 + Exonic hg19 UCEC TCGA-B5-A5OE-01A 7 12 5'UTR-CDS Intra-chr p13.33 p13.31 Seq+ 55821 ChimerSeq STARFusion TCGA_RNA-Seq RAD52-RIMKLB RAD52 chr12 1058569 - RIMKLB chr12 8925917 + Exonic hg19 UCEC TCGA-B5-A5OE-01A 3 12 5'UTR-CDS Intra-chr p13.33 p13.31 Seq+ 55822 ChimerSeq STARFusion TCGA_RNA-Seq ZNF563-FDX1L ZNF563 chr19 12444294 - FDX1L chr19 10421616 - Exonic hg19 UCEC TCGA-B5-A5OE-01A 2 13 Out-of-frame Intra-chr p13.2 Transcription factor 55823 ChimerSeq STARFusion TCGA_RNA-Seq BCL7A-GLTSCR1 BCL7A chr12 122492832 + GLTSCR1 chr19 48197372 + Exonic hg19 UCEC TCGA-B5-A5OE-01A 3 7 In-Frame Inter-chr Tumor suppressor gene Seq+ 55824 ChimerSeq STARFusion TCGA_RNA-Seq RIMKLB-SETD8 RIMKLB chr12 8906689 + SETD8 chr12 123873980 + Exonic hg19 UCEC TCGA-B5-A5OE-01A 3 7 In-Frame Intra-chr p13.31 Seq+ 55825 ChimerSeq STARFusion TCGA_RNA-Seq TARBP1-LYST TARBP1 chr1 234582549 - LYST chr1 235827921 - Exonic hg19 UCEC TCGA-B5-A5OE-01A 3 7 In-Frame Intra-chr q42.2 q42.3 Seq+ 55826 ChimerSeq STARFusion TCGA_RNA-Seq ZMYND8-EYA2 ZMYND8 chr20 45852970 - EYA2 chr20 45700824 + Exonic hg19 UCEC TCGA-B5-A5OE-01A 2 6 In-Frame Intra-chr q13.12 q13.12 Seq+ 55827 ChimerSeq STARFusion TCGA_RNA-Seq ZNF823-SIPA1L3 ZNF823 chr19 11849632 - SIPA1L3 chr19 38519729 + Exonic hg19 UCEC TCGA-B5-A5OE-01A 2 5 CDS-5'UTR Intra-chr p13.2 Transcription factor q13.13 Seq+ 55828 ChimerSeq STARFusion TCGA_RNA-Seq DCAF5-SRP54 DCAF5 chr14 69588934 - SRP54 chr14 35487898 + Exonic hg19 UCEC TCGA-B5-A5OE-01A 2 0 In-Frame Intra-chr q24.1 q13.2 55829 ChimerSeq STARFusion TCGA_RNA-Seq RPL11-PDE6A RPL11 chr1 24020403 + PDE6A chr5 149246797 - Exonic hg19 UCEC TCGA-AP-A054-01A 4 0 Out-of-frame Inter-chr p36.11 Tumor suppressor gene q32 55830 ChimerSeq STARFusion TCGA_RNA-Seq NEDD9-ADTRP NEDD9 chr6 11213514 - ADTRP chr6 11714745 - Exonic hg19 UCEC TCGA-A5-A2K2-01A 64 274 Out-of-frame Intra-chr p24.2 p24.1 Seq+ 55831 ChimerSeq STARFusion TCGA_RNA-Seq COPZ1-HOXC9 COPZ1 chr12 54718965 + HOXC9 chr12 54396214 + Exonic hg19 UCEC TCGA-A5-A2K2-01A 42 20 Out-of-frame Intra-chr q13.13 q13.13 Transcription factor Seq+ 55832 ChimerSeq STARFusion TCGA_RNA-Seq CCNF-NPW CCNF chr16 2507017 + NPW chr16 2070534 + Exonic hg19 UCEC TCGA-A5-A2K2-01A 13 72 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 55833 ChimerSeq STARFusion TCGA_RNA-Seq RAB11FIP4-NPLOC4 RAB11FIP4 chr17 29815290 + NPLOC4 chr17 79539114 - Exonic hg19 UCEC TCGA-A5-A2K2-01A 5 28 Out-of-frame Intra-chr q11.2 q25.3 Seq+ 55834 ChimerSeq STARFusion TCGA_RNA-Seq RAB11FIP4-NPLOC4 RAB11FIP4 chr17 29761140 + NPLOC4 chr17 79539114 - Exonic hg19 UCEC TCGA-A5-A2K2-01A 2 28 In-Frame Intra-chr q11.2 q25.3 Seq+ 55835 ChimerSeq STARFusion TCGA_RNA-Seq ALK-GALNT14 ALK chr2 29519754 - GALNT14 chr2 31152353 - Exonic hg19 UCEC TCGA-A5-A2K2-01A 5 10 In-Frame Intra-chr p23.1 TK:ALK Oncogene p23.1 Seq+ 55836 ChimerSeq STARFusion TCGA_RNA-Seq GATC-CCDC64 GATC chr12 120894982 + CCDC64 chr12 120499514 + Exonic hg19 UCEC TCGA-A5-A2K2-01A 6 5 Out-of-frame Intra-chr q24.31 Seq+ 55837 ChimerSeq STARFusion TCGA_RNA-Seq PXN-GATC PXN chr12 120703420 - GATC chr12 120894879 + Exonic hg19 UCEC TCGA-A5-A2K2-01A 2 12 Out-of-frame Intra-chr q24.23 q24.31 Seq+ 55838 ChimerSeq STARFusion TCGA_RNA-Seq BCL3-ZNF233 BCL3 chr19 45260980 + ZNF233 chr19 44777052 + Exonic hg19 UCEC TCGA-A5-A2K2-01A 2 5 Out-of-frame Intra-chr q13.32 Oncogene q13.31 Transcription factor Seq+ 55839 ChimerSeq STARFusion TCGA_RNA-Seq PKP4-C11orf82 PKP4 chr2 159459616 + C11orf82 chr11 82624999 + Exonic hg19 UCEC TCGA-A5-A2K2-01A 3 0 CDS-5'UTR Inter-chr q24.1 55840 ChimerSeq STARFusion TCGA_RNA-Seq CCDC117-HSCB CCDC117 chr22 29169766 + HSCB chr22 29153066 + Exonic hg19 UCEC TCGA-DF-A2L0-01A 4 3 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 55841 ChimerSeq STARFusion TCGA_RNA-Seq WDR45B-UBA52 WDR45B chr17 80601825 - UBA52 chr19 18684103 + Exonic hg19 UCEC TCGA-DF-A2L0-01A 2 1 Out-of-frame Inter-chr q25.3 p13.11 55842 ChimerSeq STARFusion TCGA_RNA-Seq DAZAP1-NDUFS7 DAZAP1 chr19 1407801 + NDUFS7 chr19 1395390 + Exonic hg19 UCEC TCGA-AJ-A3BI-01A 6 6 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 55843 ChimerSeq STARFusion TCGA_RNA-Seq QKI-PACRG QKI chr6 163956157 + PACRG chr6 163483182 + Exonic hg19 UCEC TCGA-EY-A2OM-01A 11 0 In-Frame Intra-chr q26 q26 Tumor suppressor gene Seq+ 55844 ChimerSeq STARFusion TCGA_RNA-Seq DSCR4-KCNJ6 DSCR4 chr21 39492401 - KCNJ6 chr21 39213011 - Exonic hg19 UCEC TCGA-EY-A2OM-01A 3 0 CDS-5'UTR Intra-chr q22.13 q22.13 55845 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-HSPA1A ZBTB12 chr6 31868873 - HSPA1A chr6 31783590 + Exonic hg19 UCEC TCGA-BG-A2AD-01A 5 0 Out-of-frame Intra-chr p21.33 Transcription factor 55846 ChimerSeq STARFusion TCGA_RNA-Seq ACTB-HCG18 ACTB chr7 5568079 - HCG18 chr6 30256989 - Exonic hg19 UCEC TCGA-BG-A2AD-01A 4 0 Out-of-frame Inter-chr p22.1 55847 ChimerSeq STARFusion TCGA_RNA-Seq RIT1-TARS2 RIT1 chr1 155874102 - TARS2 chr1 150476811 + Exonic hg19 UCEC TCGA-FI-A3PX-01A 22 72 In-Frame Intra-chr q22 q21.2 Seq+ 55848 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-NKAIN1 PUM1 chr1 31422980 - NKAIN1 chr1 31661034 - Exonic hg19 UCEC TCGA-FI-A3PX-01A 12 56 In-Frame Intra-chr p35.2 p35.2 Seq+ 55849 ChimerSeq STARFusion TCGA_RNA-Seq PUM1-NKAIN1 PUM1 chr1 31422974 - NKAIN1 chr1 31661034 - Exonic hg19 UCEC TCGA-FI-A3PX-01A 10 56 In-Frame Intra-chr p35.2 p35.2 Seq+ 55850 ChimerSeq STARFusion TCGA_RNA-Seq USP25-DZIP3 USP25 chr21 17163983 + DZIP3 chr3 108392925 + Exonic hg19 UCEC TCGA-FI-A3PX-01A 9 45 In-Frame Inter-chr q21.1 q13.13 Seq+ 55851 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC1-MAP4 SMARCC1 chr3 47702784 - MAP4 chr3 47919013 - Exonic hg19 UCEC TCGA-FI-A3PX-01A 7 45 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 55852 ChimerSeq STARFusion TCGA_RNA-Seq NOS1AP-ATF6 NOS1AP chr1 162257226 + ATF6 chr1 161789423 + Exonic hg19 UCEC TCGA-FI-A3PX-01A 4 21 In-Frame Intra-chr q23.3 q23.3 Transcription factor Seq+ 55853 ChimerSeq STARFusion TCGA_RNA-Seq GON4L-SEC22B GON4L chr1 155826938 - SEC22B chr1 145109524 + Exonic hg19 UCEC TCGA-FI-A3PX-01A 3 14 5'UTR-CDS Intra-chr q22 p12 55854 ChimerSeq STARFusion TCGA_RNA-Seq EPCAM-ABCG8 EPCAM chr2 47596720 + ABCG8 chr2 44071646 + Exonic hg19 UCEC TCGA-FI-A3PX-01A 3 11 Out-of-frame Intra-chr p21 p21 Seq+ 55855 ChimerSeq STARFusion TCGA_RNA-Seq FAM104A-CDC42EP4 FAM104A chr17 71228225 - CDC42EP4 chr17 71282751 - Exonic hg19 UCEC TCGA-FI-A3PX-01A 3 10 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 55856 ChimerSeq STARFusion TCGA_RNA-Seq GON4L-SEC22B GON4L chr1 155826950 - SEC22B chr1 145109524 + Exonic hg19 UCEC TCGA-FI-A3PX-01A 2 14 5'UTR-CDS Intra-chr q22 p12 55857 ChimerSeq STARFusion TCGA_RNA-Seq DIP2C-KIAA0195 DIP2C chr10 355971 - KIAA0195 chr17 73467881 + Exonic hg19 UCEC TCGA-FI-A3PX-01A 4 1 CDS-5'UTR Inter-chr p15.3 55858 ChimerSeq STARFusion TCGA_RNA-Seq CRNKL1-PBX1 CRNKL1 chr20 20028440 - PBX1 chr1 164776779 + Exonic hg19 UCEC TCGA-FI-A3PX-01A 3 1 Out-of-frame Inter-chr p11.23 q23.3 Oncogene Transcription factor 55859 ChimerSeq STARFusion TCGA_RNA-Seq TNFSF10-NCEH1 TNFSF10 chr3 172227007 - NCEH1 chr3 172365904 - Exonic hg19 UCEC TCGA-FI-A3PX-01A 2 5 Out-of-frame Intra-chr q26.31 q26.31 Seq+ 55860 ChimerSeq STARFusion TCGA_RNA-Seq PDXDC2P-COG4 PDXDC2P chr16 70020284 - COG4 chr16 70531958 - Exonic hg19 UCEC TCGA-FI-A3PX-01A 2 1 3'UTR-CDS Intra-chr q22.1 q22.1 55861 ChimerSeq STARFusion TCGA_RNA-Seq KNDC1-CRIP1 KNDC1 chr10 134996878 + CRIP1 chr14 105954667 + Exonic hg19 UCEC TCGA-AX-A06J-01A 3 0 Out-of-frame Inter-chr q26.3 q32.33 55862 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 UCEC TCGA-AX-A06J-01A 3 0 Out-of-frame Inter-chr p13.13 q13.1 55863 ChimerSeq STARFusion TCGA_RNA-Seq CCDC37-BCAM CCDC37 chr3 126152026 + BCAM chr19 45322835 + Exonic hg19 UCEC TCGA-AX-A1CA-01A 31 0 Out-of-frame Inter-chr q13.32 55864 ChimerSeq STARFusion TCGA_RNA-Seq HEPHL1-PANX1 HEPHL1 chr11 93800909 + PANX1 chr11 93862494 + Exonic hg19 UCEC TCGA-AX-A1CA-01A 4 0 Out-of-frame Intra-chr q21 q21 55865 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC10-RPL31P50 DNAJC10 chr2 183653145 + RPL31P50 chr12 31750085 - Exonic hg19 UCEC TCGA-AX-A1CA-01A 3 0 Out-of-frame Inter-chr q32.1 p11.21 55866 ChimerSeq STARFusion TCGA_RNA-Seq MBP-CBLN2 MBP chr18 74817167 - CBLN2 chr18 70219871 - Exonic hg19 UCEC TCGA-AJ-A2QM-01A 25 120 CDS-5'UTR Intra-chr q23 q22.3 Seq+ 55867 ChimerSeq STARFusion TCGA_RNA-Seq DIS3L2-MICU1 DIS3L2 chr2 232826475 + MICU1 chr10 74326552 - Exonic hg19 UCEC TCGA-AJ-A2QM-01A 44 5 5'UTR-5'UTR Inter-chr q37.1 q22.1 Seq+ 55868 ChimerSeq STARFusion TCGA_RNA-Seq KCNN1-GATA6 KCNN1 chr19 18085996 + GATA6 chr18 19780619 + Exonic hg19 UCEC TCGA-AJ-A2QM-01A 9 32 In-Frame Inter-chr p13.11 q11.2 Transcription factor Seq+ 55869 ChimerSeq STARFusion TCGA_RNA-Seq SREBF1-ZNF232 SREBF1 chr17 17740041 - ZNF232 chr17 5013163 - Exonic hg19 UCEC TCGA-AJ-A2QM-01A 8 29 Out-of-frame Intra-chr p11.2 Transcription factor p13.2 Transcription factor Seq+ 55870 ChimerSeq STARFusion TCGA_RNA-Seq RBFA-TXNL4A RBFA chr18 77797506 + TXNL4A chr18 77737701 - Exonic hg19 UCEC TCGA-AJ-A2QM-01A 6 33 In-Frame Intra-chr q23 q23 Seq+ 55871 ChimerSeq STARFusion TCGA_RNA-Seq RBFA-TXNL4A RBFA chr18 77798617 + TXNL4A chr18 77755433 - Exonic hg19 UCEC TCGA-AJ-A2QM-01A 2 33 CDS-5'UTR Intra-chr q23 q23 Seq+ 55872 ChimerSeq STARFusion TCGA_RNA-Seq HAPLN4-MEF2B HAPLN4 chr19 19371622 - MEF2B chr19 19261573 - Exonic hg19 UCEC TCGA-AJ-A2QM-01A 5 18 CDS-5'UTR Intra-chr p13.11 p13.11 Transcription factor Seq+ 55873 ChimerSeq STARFusion TCGA_RNA-Seq SREBF1-ZNF232 SREBF1 chr17 17740041 - ZNF232 chr17 5013063 - Exonic hg19 UCEC TCGA-AJ-A2QM-01A 2 29 Out-of-frame Intra-chr p11.2 Transcription factor p13.2 Transcription factor Seq+ 55874 ChimerSeq STARFusion TCGA_RNA-Seq NAPEPLD-RELN NAPEPLD chr7 102768930 - RELN chr7 103143677 - Exonic hg19 UCEC TCGA-AJ-A2QM-01A 2 20 In-Frame Intra-chr Tumor suppressor gene q22.1 Seq+ 55875 ChimerSeq STARFusion TCGA_RNA-Seq DDA1-MYO9B DDA1 chr19 17420466 + MYO9B chr19 17311448 + Exonic hg19 UCEC TCGA-AJ-A2QM-01A 3 15 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 55876 ChimerSeq STARFusion TCGA_RNA-Seq CDKN1A-ERAS CDKN1A chr6 36646575 + ERAS chrX 48687491 + Exonic hg19 UCEC TCGA-B5-A3FB-01A 592 1853 5'UTR-5'UTR Inter-chr p21.2 Tumor suppressor gene p11.23 Seq+ 55877 ChimerSeq STARFusion TCGA_RNA-Seq ABCG1-BACE2 ABCG1 chr21 43708422 + BACE2 chr21 42598193 + Exonic hg19 UCEC TCGA-B5-A3FB-01A 3 32 In-Frame Intra-chr q22.3 q22.2 Seq+ 55878 ChimerSeq STARFusion TCGA_RNA-Seq SLC37A4-HYOU1 SLC37A4 chr11 118900896 - HYOU1 chr11 118919027 - Exonic hg19 UCEC TCGA-B5-A3FB-01A 3 15 Out-of-frame Intra-chr Seq+ 55879 ChimerSeq STARFusion TCGA_RNA-Seq SLC37A4-HYOU1 SLC37A4 chr11 118901559 - HYOU1 chr11 118918792 - Exonic hg19 UCEC TCGA-B5-A3FB-01A 2 15 5'UTR-CDS Intra-chr Seq+ 55880 ChimerSeq STARFusion TCGA_RNA-Seq ACOX1-SRP68 ACOX1 chr17 73951647 - SRP68 chr17 74060252 - Exonic hg19 UCEC TCGA-B5-A3FB-01A 3 8 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 55881 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R13B-XRCC3 PPP1R13B chr14 104313636 - XRCC3 chr14 104174996 - Exonic hg19 UCEC TCGA-B5-A3FB-01A 2 11 Out-of-frame Intra-chr q32.33 q32.33 Seq+ 55882 ChimerSeq STARFusion TCGA_RNA-Seq BCAR3-ABCA4 BCAR3 chr1 94054534 - ABCA4 chr1 94495187 - Exonic hg19 UCEC TCGA-AJ-A3EJ-01A 67 166 In-Frame Intra-chr p22.1 p22.1 Seq+ 55883 ChimerSeq STARFusion TCGA_RNA-Seq TPD52-MRPS28 TPD52 chr8 80950355 - MRPS28 chr8 80831383 - Exonic hg19 UCEC TCGA-AJ-A3EJ-01A 3 43 Out-of-frame Intra-chr q21.13 q21.13 55884 ChimerSeq STARFusion TCGA_RNA-Seq WWP2-NHP2L1 WWP2 chr16 69876023 + NHP2L1 chr22 42076368 - Exonic hg19 UCEC TCGA-AJ-A3EJ-01A 5 33 Out-of-frame Inter-chr q22.1 Seq+ 55885 ChimerSeq STARFusion TCGA_RNA-Seq TMEM116-ERP29 TMEM116 chr12 112443061 - ERP29 chr12 112457487 + Exonic hg19 UCEC TCGA-AJ-A3EJ-01A 3 36 5'UTR-CDS Intra-chr q24.13 q24.13 55886 ChimerSeq STARFusion TCGA_RNA-Seq NGRN-ZNF710 NGRN chr15 90809630 + ZNF710 chr15 90622892 + Exonic hg19 UCEC TCGA-AJ-A3EJ-01A 4 26 Out-of-frame Intra-chr q26.1 q26.1 Transcription factor Seq+ 55887 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1D-SECTM1 CSNK1D chr17 80231182 - SECTM1 chr17 80280887 - Exonic hg19 UCEC TCGA-AJ-A3EJ-01A 3 11 In-Frame Intra-chr q25.3 q25.3 Seq+ 55888 ChimerSeq STARFusion TCGA_RNA-Seq GSK3B-RASSF2 GSK3B chr3 119812194 - RASSF2 chr20 4781708 - Exonic hg19 UCEC TCGA-AJ-A3EJ-01A 3 9 CDS-5'UTR Inter-chr q13.33 CMGC:GSK Tumor suppressor gene p13 Tumor suppressor gene Seq+ 55889 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1D-SECTM1 CSNK1D chr17 80231182 - SECTM1 chr17 80280246 - Exonic hg19 UCEC TCGA-AJ-A3EJ-01A 2 11 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 55890 ChimerSeq STARFusion TCGA_RNA-Seq LRP4-LINC01057 LRP4 chr11 46889530 - LINC01057 chr1 95123611 - Exonic hg19 UCEC TCGA-AJ-A3EJ-01A 2 7 Out-of-frame Inter-chr p11.2 55891 ChimerSeq STARFusion TCGA_RNA-Seq PRCC-RRNAD1 PRCC chr1 156738031 + RRNAD1 chr1 156701783 + Exonic hg19 UCEC TCGA-AJ-A3EJ-01A 2 4 In-Frame Intra-chr q23.1 q23.1 Seq+ 55892 ChimerSeq STARFusion TCGA_RNA-Seq ENTPD2-TMEM210 ENTPD2 chr9 139948333 - TMEM210 chr9 140066228 - Exonic hg19 UCEC TCGA-BG-A0MG-01A 10 0 Out-of-frame Intra-chr q34.3 q34.3 55893 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-NUDT22 FCHSD2 chr11 72851076 - NUDT22 chr11 63996950 + Exonic hg19 UCEC TCGA-BG-A0MC-01A 3 0 In-Frame Intra-chr q13.4 q13.1 55894 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-RPS4X ZSWIM4 chr19 13942623 + RPS4X chrX 71492585 - Exonic hg19 UCEC TCGA-BG-A0MC-01A 3 0 Out-of-frame Inter-chr p13.13 q13.1 55895 ChimerSeq STARFusion TCGA_RNA-Seq NADK-IGKJ1 NADK chr1 1689914 - IGKJ1 chr2 89161433 - Exonic hg19 UCEC TCGA-AJ-A3NE-01A 29 0 Out-of-frame Inter-chr p36.33 p11.2 55896 ChimerSeq STARFusion TCGA_RNA-Seq KIF13B-EYA2 KIF13B chr8 28950262 - EYA2 chr20 45771698 + Exonic hg19 UCEC TCGA-DF-A2KR-01A 50 129 In-Frame Inter-chr p12 q13.12 Seq+ 55897 ChimerSeq STARFusion TCGA_RNA-Seq PHC2-NLRP4 PHC2 chr1 33815198 - NLRP4 chr19 56382193 + Exonic hg19 UCEC TCGA-DF-A2KR-01A 27 33 5'UTR-CDS Inter-chr p35.1 q13.43 Seq+ 55898 ChimerSeq STARFusion TCGA_RNA-Seq CDC42EP4-COMMD1 CDC42EP4 chr17 71308032 - COMMD1 chr2 62227836 + Exonic hg19 UCEC TCGA-DF-A2KR-01A 15 49 5'UTR-CDS Inter-chr q25.1 p15 Seq+ 55899 ChimerSeq STARFusion TCGA_RNA-Seq NOS1AP-ATF6 NOS1AP chr1 162040072 + ATF6 chr1 161928236 + Exonic hg19 UCEC TCGA-DF-A2KR-01A 9 41 Out-of-frame Intra-chr q23.3 q23.3 Transcription factor Seq+ 55900 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125718 - CXCL16 chr17 4637332 - Exonic hg19 UCEC TCGA-DF-A2KR-01A 9 19 Out-of-frame Inter-chr q12.2 p13.2 55901 ChimerSeq STARFusion TCGA_RNA-Seq ZNF148-AGXT ZNF148 chr3 125006947 - AGXT chr2 241810766 + Exonic hg19 UCEC TCGA-DF-A2KR-01A 6 23 In-Frame Inter-chr q21.2 Transcription factor q37.3 Seq+ 55902 ChimerSeq STARFusion TCGA_RNA-Seq CTIF-C5orf56 CTIF chr18 46288060 + C5orf56 chr5 131785342 + Exonic hg19 UCEC TCGA-DF-A2KR-01A 6 18 CDS-5'UTR Inter-chr q31.1 Seq+ 55903 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125699 - CXCL16 chr17 4637313 - Exonic hg19 UCEC TCGA-DF-A2KR-01A 5 19 Out-of-frame Inter-chr q12.2 p13.2 55904 ChimerSeq STARFusion TCGA_RNA-Seq FMNL2-WDYHV1 FMNL2 chr2 153504449 + WDYHV1 chr8 124447682 + Exonic hg19 UCEC TCGA-DF-A2KR-01A 4 9 Out-of-frame Inter-chr q23.3 q24.13 Seq+ 55905 ChimerSeq STARFusion TCGA_RNA-Seq C5orf56-CTIF C5orf56 chr5 131755632 + CTIF chr18 46343592 + Exonic hg19 UCEC TCGA-DF-A2KR-01A 2 5 5'UTR-CDS Inter-chr q31.1 Seq+ 55906 ChimerSeq STARFusion TCGA_RNA-Seq ATAD2-KHDRBS3 ATAD2 chr8 124346118 - KHDRBS3 chr8 136533480 + Exonic hg19 UCEC TCGA-DF-A2KR-01A 2 4 In-Frame Intra-chr q24.13 q24.23 Seq+ 55907 ChimerSeq STARFusion TCGA_RNA-Seq SH3BP4-VCPIP1 SH3BP4 chr2 235860814 + VCPIP1 chr8 67563779 - Exonic hg19 UCEC TCGA-DF-A2KR-01A 2 2 5'UTR-CDS Inter-chr q37.2 q13.1 55908 ChimerSeq STARFusion TCGA_RNA-Seq CDS2-PCBP2 CDS2 chr20 5177910 + PCBP2 chr12 53873469 + Exonic hg19 UCEC TCGA-AP-A1DP-01A 3 0 Out-of-frame Inter-chr p12.3 q13.13 55909 ChimerSeq STARFusion TCGA_RNA-Seq GON4L-RAB5B GON4L chr1 155823067 - RAB5B chr12 56380653 + Exonic hg19 UCEC TCGA-FI-A2F9-01A 20 0 CDS-5'UTR Inter-chr q22 q13.2 Seq+ 55910 ChimerSeq STARFusion TCGA_RNA-Seq NELFB-C9orf142 NELFB chr9 140167953 + C9orf142 chr9 139887199 + Exonic hg19 UCEC TCGA-FI-A2F9-01A 17 0 Out-of-frame Intra-chr q34.3 q34.3 55911 ChimerSeq STARFusion TCGA_RNA-Seq PFKFB4-SLC16A5 PFKFB4 chr3 48594114 - SLC16A5 chr17 73094133 + Exonic hg19 UCEC TCGA-FI-A2F9-01A 14 0 In-Frame Inter-chr p21.31 q25.1 55912 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V1C1-PML ATP6V1C1 chr8 104054635 + PML chr15 74315169 + Exonic hg19 UCEC TCGA-FI-A2F9-01A 8 0 In-Frame Inter-chr q22.3 q24.1 Oncogene Tumor suppressor gene Seq+ 55913 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-CYB5D2 MAP4 chr3 47898921 - CYB5D2 chr17 4053185 + Exonic hg19 UCEC TCGA-FI-A2F9-01A 8 0 In-Frame Inter-chr p21.31 p13.2 55914 ChimerSeq STARFusion TCGA_RNA-Seq KMT2D-FMNL3 KMT2D chr12 49453396 - FMNL3 chr12 50062337 - Exonic hg19 UCEC TCGA-FI-A2F9-01A 4 0 Out-of-frame Intra-chr q13.12 Oncogene q13.12 55915 ChimerSeq STARFusion TCGA_RNA-Seq SPARC-COL18A1 SPARC chr5 151055729 - COL18A1 chr21 46925136 + Exonic hg19 UCEC TCGA-FI-A2F9-01A 4 0 Out-of-frame Inter-chr q33.1 Tumor suppressor gene q22.3 55916 ChimerSeq STARFusion TCGA_RNA-Seq CERS4-PUM1 CERS4 chr19 8275746 + PUM1 chr1 31425210 - Exonic hg19 UCEC TCGA-FI-A2F9-01A 3 0 5'UTR-CDS Inter-chr p13.2 p35.2 55917 ChimerSeq STARFusion TCGA_RNA-Seq OTX1-CTNNA2 OTX1 chr2 63278452 + CTNNA2 chr2 79732180 + Exonic hg19 UCEC TCGA-FI-A2F9-01A 3 0 5'UTR-5'UTR Intra-chr p15 Transcription factor p12 Tumor suppressor gene 55918 ChimerSeq STARFusion TCGA_RNA-Seq RFX3-GLIS3 RFX3 chr9 3525747 - GLIS3 chr9 3937189 - Exonic hg19 UCEC TCGA-FI-A2F9-01A 3 0 5'UTR-CDS Intra-chr p24.2 Transcription factor p24.2 Transcription factor 55919 ChimerSeq STARFusion TCGA_RNA-Seq CALD1-AKR1B10 CALD1 chr7 134464500 + AKR1B10 chr7 134215395 + Exonic hg19 UCEC TCGA-AP-A0L8-01A 4 0 5'UTR-CDS Intra-chr q33 q33 Seq+ 55920 ChimerSeq STARFusion TCGA_RNA-Seq MACF1-OR6C4 MACF1 chr1 39854330 + OR6C4 chr12 55944993 + Exonic hg19 UCEC TCGA-AP-A0L8-01A 4 0 CDS-5'UTR Inter-chr p34.3 q13.2 55921 ChimerSeq STARFusion TCGA_RNA-Seq APIP-ACTG2 APIP chr11 34937775 - ACTG2 chr2 74135800 + Exonic hg19 UCEC TCGA-AX-A0IU-01A 32 0 In-Frame Inter-chr p13 p13.1 Seq+ 55922 ChimerSeq STARFusion TCGA_RNA-Seq EDF1-CLN3 EDF1 chr9 139757358 - CLN3 chr16 28478223 - Exonic hg19 UCEC TCGA-AX-A0IU-01A 16 0 CDS-3'UTR Inter-chr q34.3 p12.1 55923 ChimerSeq STARFusion TCGA_RNA-Seq EDF1-CLN3 EDF1 chr9 139757358 - CLN3 chr16 28478223 - Exonic hg19 UCEC TCGA-AX-A0IU-01A 16 0 CDS-3'UTR Inter-chr q34.3 p12.1 55924 ChimerSeq STARFusion TCGA_RNA-Seq ZMYND8-SULF2 ZMYND8 chr20 45865070 - SULF2 chr20 46295232 - Exonic hg19 UCEC TCGA-AX-A0IU-01A 5 0 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 55925 ChimerSeq STARFusion TCGA_RNA-Seq C6orf48-C2 C6orf48 chr6 31807452 + C2 chr6 31868874 + Exonic hg19 UCEC TCGA-AX-A0IU-01A 4 0 Out-of-frame Intra-chr p21.33 55926 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC10-RPL31P50 DNAJC10 chr2 183653145 + RPL31P50 chr12 31750085 - Exonic hg19 UCEC TCGA-BG-A0VT-01A 4 0 Out-of-frame Inter-chr q32.1 p11.21 55927 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2B-NUP214 PRRC2B chr9 134358832 + NUP214 chr9 134103547 + Exonic hg19 UCEC TCGA-AX-A2H4-01A 33 125 Out-of-frame Intra-chr q34.13 q34.13 Oncogene Seq+ 55928 ChimerSeq STARFusion TCGA_RNA-Seq PAPOLA-GSKIP PAPOLA chr14 96968937 + GSKIP chr14 96846025 + Exonic hg19 UCEC TCGA-AX-A2H4-01A 19 28 Out-of-frame Intra-chr q32.2 q32.2 Seq+ 55929 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF5-STEAP1B RAPGEF5 chr7 22330794 - STEAP1B chr7 22459455 - Exonic hg19 UCEC TCGA-AX-A2H4-01A 15 35 In-Frame Intra-chr p15.3 p15.3 Seq+ 55930 ChimerSeq STARFusion TCGA_RNA-Seq CSNK1E-DMC1 CSNK1E chr22 38694791 - DMC1 chr22 38958374 - Exonic hg19 UCEC TCGA-AX-A2H4-01A 4 40 In-Frame Intra-chr q13.1 q13.1 Seq+ 55931 ChimerSeq STARFusion TCGA_RNA-Seq APOPT1-MARK3 APOPT1 chr14 104029461 + MARK3 chr14 103958114 + Exonic hg19 UCEC TCGA-AX-A2H4-01A 7 19 Out-of-frame Intra-chr q32.33 q32.32 CAMK:CAMKL Seq+ 55932 ChimerSeq STARFusion TCGA_RNA-Seq PELI2-KTN1 PELI2 chr14 56585455 + KTN1 chr14 56122760 + Exonic hg19 UCEC TCGA-AX-A2H4-01A 8 15 In-Frame Intra-chr q22.3 q22.3 Seq+ 55933 ChimerSeq STARFusion TCGA_RNA-Seq NUMB-HEATR4 NUMB chr14 73876645 - HEATR4 chr14 73945547 - Exonic hg19 UCEC TCGA-AX-A2H4-01A 5 14 5'UTR-CDS Intra-chr q24.3 Tumor suppressor gene q24.3 Seq+ 55934 ChimerSeq STARFusion TCGA_RNA-Seq PLXND1-TMCC1 PLXND1 chr3 129277271 - TMCC1 chr3 129373946 - Exonic hg19 UCEC TCGA-AX-A2H4-01A 3 21 Out-of-frame Intra-chr q22.1 q22.1 KB Seq+ 55935 ChimerSeq STARFusion TCGA_RNA-Seq KMT2E-LHFPL3 KMT2E chr7 104717880 + LHFPL3 chr7 104377122 + Exonic hg19 UCEC TCGA-AX-A2H4-01A 3 17 Out-of-frame Intra-chr q22.3 q22.2 55936 ChimerSeq STARFusion TCGA_RNA-Seq SRPK2-KIF12 SRPK2 chr7 105029095 - KIF12 chr9 116861449 - Exonic hg19 UCEC TCGA-AX-A2H4-01A 3 11 CDS-5'UTR Inter-chr q22.3 CMGC:SRPK q32 Seq+ 55937 ChimerSeq STARFusion TCGA_RNA-Seq PABPC1L-PKIG PABPC1L chr20 43561826 + PKIG chr20 43227257 + Exonic hg19 UCEC TCGA-AX-A2H4-01A 2 8 CDS-5'UTR Intra-chr q13.12 q13.12 Seq+ 55938 ChimerSeq STARFusion TCGA_RNA-Seq TMX2-SERPING1 TMX2 chr11 57480279 + SERPING1 chr11 57369508 + Exonic hg19 UCEC TCGA-AX-A2H4-01A 2 6 Out-of-frame Intra-chr q12.1 q12.1 55939 ChimerSeq STARFusion TCGA_RNA-Seq FAM168A-C2CD3 FAM168A chr11 73308968 - C2CD3 chr11 73724570 - Exonic hg19 UCEC TCGA-AX-A2H4-01A 2 5 5'UTR-3'UTR Intra-chr q13.4 q13.4 Seq+ 55940 ChimerSeq STARFusion TCGA_RNA-Seq PTK2-MKLN1 PTK2 chr8 141745350 - MKLN1 chr7 131147976 + Exonic hg19 UCEC TCGA-AX-A2H4-01A 2 5 Out-of-frame Inter-chr q24.3 q32.3 Seq+ 55941 ChimerSeq STARFusion TCGA_RNA-Seq SRPK2-EFCAB10 SRPK2 chr7 105029095 - EFCAB10 chr7 105209737 - Exonic hg19 UCEC TCGA-AX-A2H4-01A 2 5 CDS-3'UTR Intra-chr q22.3 CMGC:SRPK q22.3 Seq+ 55942 ChimerSeq STARFusion TCGA_RNA-Seq SRPK2-EFCAB10 SRPK2 chr7 105029095 - EFCAB10 chr7 105210018 - Exonic hg19 UCEC TCGA-AX-A2H4-01A 2 5 CDS-3'UTR Intra-chr q22.3 CMGC:SRPK q22.3 Seq+ 55943 ChimerSeq STARFusion TCGA_RNA-Seq MPND-CCDC94 MPND chr19 4358169 + CCDC94 chr19 4251024 + Exonic hg19 UCEC TCGA-AX-A2H4-01A 2 3 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 55944 ChimerSeq STARFusion TCGA_RNA-Seq SNHG3-UBE2D2 SNHG3 chr1 28834672 + UBE2D2 chr5 138979957 + Exonic hg19 UCEC TCGA-AJ-A3NC-01A 2 4 5'UTR-5'UTR Inter-chr p35.3 q31.2 55945 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL671P-HCG4P7 RN7SL671P chr4 1870886 - HCG4P7 chr6 29855588 - Exonic hg19 UCEC TCGA-BG-A0MO-01A 4 0 Out-of-frame Inter-chr 55946 ChimerSeq STARFusion TCGA_RNA-Seq LIMK2-SMTN LIMK2 chr22 31621805 + SMTN chr22 31479165 + Exonic hg19 UCEC TCGA-EY-A1GM-01A 16 0 Out-of-frame Intra-chr q12.2 TKL:LISK q12.2 55947 ChimerSeq STARFusion TCGA_RNA-Seq UBAP2-KIF24 UBAP2 chr9 34017048 - KIF24 chr9 34286702 - Exonic hg19 UCEC TCGA-EY-A1GM-01A 4 0 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 55948 ChimerSeq STARFusion TCGA_RNA-Seq RN7SL671P-HCG4P7 RN7SL671P chr4 1870886 - HCG4P7 chr6 29855588 - Exonic hg19 UCEC TCGA-EY-A1GW-01A 5 0 Out-of-frame Inter-chr 55949 ChimerSeq STARFusion TCGA_RNA-Seq SRGAP2-SLC2A5 SRGAP2 chr1 206594625 + SLC2A5 chr1 9129653 - Exonic hg19 UCEC TCGA-AX-A2HK-01A 7 0 CDS-5'UTR Intra-chr q32.1 Tumor suppressor gene p36.23 55950 ChimerSeq STARFusion TCGA_RNA-Seq ERI3-EIF2B3 ERI3 chr1 44818522 - EIF2B3 chr1 45392411 - Exonic hg19 UCEC TCGA-JU-AAVI-01A 13 29 In-Frame Intra-chr p34.1 p34.1 Seq+ 55951 ChimerSeq STARFusion TCGA_RNA-Seq CFLAR-XRCC5 CFLAR chr2 202000830 + XRCC5 chr2 217054948 + Exonic hg19 UCEC TCGA-JU-AAVI-01A 5 12 In-Frame Intra-chr q33.1 q35 Tumor suppressor gene 55952 ChimerSeq STARFusion TCGA_RNA-Seq USP54-KIAA0391 USP54 chr10 75331179 - KIAA0391 chr14 35786455 + Exonic hg19 UCEC TCGA-B5-A5OD-01A 108 403 CDS-3'UTR Inter-chr q22.2 q13.2 55953 ChimerSeq STARFusion TCGA_RNA-Seq RFT1-TKT RFT1 chr3 53159925 - TKT chr3 53276258 - Exonic hg19 UCEC TCGA-B5-A5OD-01A 47 109 In-Frame Intra-chr p21.1 p21.1 Tumor suppressor gene Seq+ 55954 ChimerSeq STARFusion TCGA_RNA-Seq PPFIA1-CD82 PPFIA1 chr11 70118542 + CD82 chr11 44609025 + Exonic hg19 UCEC TCGA-B5-A5OD-01A 33 100 5'UTR-5'UTR Intra-chr q13.3 p11.2 Tumor suppressor gene Seq+ 55955 ChimerSeq STARFusion TCGA_RNA-Seq MED25-CCDC155 MED25 chr19 50335672 + CCDC155 chr19 49910143 + Exonic hg19 UCEC TCGA-B5-A5OD-01A 25 122 In-Frame Intra-chr q13.33 q13.33 Seq+ 55956 ChimerSeq STARFusion TCGA_RNA-Seq ALAS1-RBM6 ALAS1 chr3 52242263 + RBM6 chr3 50112634 + Exonic hg19 UCEC TCGA-B5-A5OD-01A 33 76 Out-of-frame Intra-chr p21.2 p21.31 Tumor suppressor gene Seq+ 55957 ChimerSeq STARFusion TCGA_RNA-Seq PPT2-TNF PPT2 chr6 32122181 + TNF chr6 31544311 + Exonic hg19 UCEC TCGA-B5-A5OD-01A 14 37 5'UTR-CDS Intra-chr Seq+ 55958 ChimerSeq STARFusion TCGA_RNA-Seq SUCO-SND1 SUCO chr1 172502637 + SND1 chr7 127714554 + Exonic hg19 UCEC TCGA-B5-A5OD-01A 14 29 Out-of-frame Inter-chr q24.3 q32.1 Seq+ 55959 ChimerSeq STARFusion TCGA_RNA-Seq NFATC3-NUTF2 NFATC3 chr16 68119687 + NUTF2 chr16 67899005 + Exonic hg19 UCEC TCGA-B5-A5OD-01A 10 7 CDS-5'UTR Intra-chr q22.1 Transcription factor q22.1 55960 ChimerSeq STARFusion TCGA_RNA-Seq PPT2-TNF PPT2 chr6 32121413 + TNF chr6 31544311 + Exonic hg19 UCEC TCGA-B5-A5OD-01A 2 37 Out-of-frame Intra-chr Seq+ 55961 ChimerSeq STARFusion TCGA_RNA-Seq PPT2-TNF PPT2 chr6 32122171 + TNF chr6 31544311 + Exonic hg19 UCEC TCGA-B5-A5OD-01A 2 37 5'UTR-CDS Intra-chr Seq+ 55962 ChimerSeq STARFusion TCGA_RNA-Seq ANKRD11-SPIRE2 ANKRD11 chr16 89484692 - SPIRE2 chr16 89911730 + Exonic hg19 UCEC TCGA-B5-A5OD-01A 6 16 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 55963 ChimerSeq STARFusion TCGA_RNA-Seq MEST-STRIP2 MEST chr7 130143837 + STRIP2 chr7 129120626 + Exonic hg19 UCEC TCGA-B5-A5OD-01A 4 15 Out-of-frame Intra-chr q32.2 q32.1 Seq+ 55964 ChimerSeq STARFusion TCGA_RNA-Seq WIPF2-NFAM1 WIPF2 chr17 38375744 + NFAM1 chr22 42807742 - Exonic hg19 UCEC TCGA-B5-A5OD-01A 5 10 5'UTR-CDS Inter-chr q21.2 q13.2 Seq+ 55965 ChimerSeq STARFusion TCGA_RNA-Seq CCDC57-CSNK1D CCDC57 chr17 80109436 - CSNK1D chr17 80209403 - Exonic hg19 UCEC TCGA-B5-A5OD-01A 4 12 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 55966 ChimerSeq STARFusion TCGA_RNA-Seq CDKN2D-HM13 CDKN2D chr19 10679623 - HM13 chr20 30154013 + Exonic hg19 UCEC TCGA-B5-A5OD-01A 5 3 5'UTR-CDS Inter-chr p13.2 q11.21 Seq+ 55967 ChimerSeq STARFusion TCGA_RNA-Seq SLC43A2-SMYD4 SLC43A2 chr17 1516489 - SMYD4 chr17 1686770 - Exonic hg19 UCEC TCGA-B5-A5OD-01A 2 3 Out-of-frame Intra-chr p13.3 Tumor suppressor gene Seq+ 55968 ChimerSeq STARFusion TCGA_RNA-Seq MICALL1-IFT122 MICALL1 chr22 38329119 + IFT122 chr3 129236312 + Exonic hg19 UCEC TCGA-A5-A0G5-01A 22 0 In-Frame Inter-chr q13.1 q21.3 Seq+ 55969 ChimerSeq STARFusion TCGA_RNA-Seq ILF3-DNM2 ILF3 chr19 10782211 + DNM2 chr19 10909162 + Exonic hg19 UCEC TCGA-A5-A0G5-01A 18 0 In-Frame Intra-chr p13.2 p13.2 Seq+ 55970 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF7-TEX29 ARHGEF7 chr13 111870227 + TEX29 chr13 111980530 + Exonic hg19 UCEC TCGA-A5-A0G5-01A 16 0 In-Frame Intra-chr q34 q34 55971 ChimerSeq STARFusion TCGA_RNA-Seq CTCF-NUTF2 CTCF chr16 67605167 + NUTF2 chr16 67899005 + Exonic hg19 UCEC TCGA-A5-A0G5-01A 13 0 5'UTR-5'UTR Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 Seq+ 55972 ChimerSeq STARFusion TCGA_RNA-Seq HTRA3-IGL@ HTRA3 chr4 8305970 + IGL@ chr22 23241798 + Exonic hg19 UCEC TCGA-A5-A0G5-01A 13 0 Out-of-frame Inter-chr p16.1 Tumor suppressor gene q11.22 55973 ChimerSeq STARFusion TCGA_RNA-Seq HTRA3-IGLJ2 HTRA3 chr4 8305970 + IGLJ2 chr22 23241798 + Exonic hg19 UCEC TCGA-A5-A0G5-01A 13 0 Out-of-frame Inter-chr p16.1 Tumor suppressor gene q11.22 55974 ChimerSeq STARFusion TCGA_RNA-Seq HTRA3-IGLC2 HTRA3 chr4 8305970 + IGLC2 chr22 23241798 + Exonic hg19 UCEC TCGA-A5-A0G5-01A 12 0 Out-of-frame Inter-chr p16.1 Tumor suppressor gene q11.22 55975 ChimerSeq STARFusion TCGA_RNA-Seq RYK-ZFAND3 RYK chr3 133921574 - ZFAND3 chr6 38120011 + Exonic hg19 UCEC TCGA-A5-A0G5-01A 11 0 Out-of-frame Inter-chr q22.2 TK:Ryk p21.2 Seq+ 55976 ChimerSeq STARFusion TCGA_RNA-Seq IST1-DHX38 IST1 chr16 71929492 + DHX38 chr16 72130038 + Exonic hg19 UCEC TCGA-A5-A0G5-01A 7 0 5'UTR-5'UTR Intra-chr q22.2 q22.2 Seq+ 55977 ChimerSeq STARFusion TCGA_RNA-Seq FLII-SREBF1 FLII chr17 18154152 - SREBF1 chr17 17723835 - Exonic hg19 UCEC TCGA-A5-A0G5-01A 6 0 Out-of-frame Intra-chr p11.2 Transcription factor 55978 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF7-TEX29 ARHGEF7 chr13 111870227 + TEX29 chr13 111992210 + Exonic hg19 UCEC TCGA-A5-A0G5-01A 5 0 In-Frame Intra-chr q34 q34 55979 ChimerSeq STARFusion TCGA_RNA-Seq CPA6-PTK2 CPA6 chr8 68536411 - PTK2 chr8 141774389 - Exonic hg19 UCEC TCGA-A5-A0G5-01A 5 0 Out-of-frame Intra-chr q13.2 q24.3 55980 ChimerSeq STARFusion TCGA_RNA-Seq CPSF1-CYHR1 CPSF1 chr8 145621808 - CYHR1 chr8 145675548 - Exonic hg19 UCEC TCGA-A5-A0G5-01A 5 0 Out-of-frame Intra-chr q24.3 q24.3 55981 ChimerSeq STARFusion TCGA_RNA-Seq ILF3-DNM2 ILF3 chr19 10782211 + DNM2 chr19 10912964 + Exonic hg19 UCEC TCGA-A5-A0G5-01A 5 0 In-Frame Intra-chr p13.2 p13.2 Seq+ 55982 ChimerSeq STARFusion TCGA_RNA-Seq PSAT1-CEP78 PSAT1 chr9 80916939 + CEP78 chr9 80854939 + Exonic hg19 UCEC TCGA-A5-A0G5-01A 5 0 Out-of-frame Intra-chr q21.2 q21.2 55983 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-SPOCK1 SBNO2 chr19 1147308 - SPOCK1 chr5 136476383 - Exonic hg19 UCEC TCGA-A5-A0G5-01A 5 0 Out-of-frame Inter-chr p13.3 q31.2 55984 ChimerSeq STARFusion TCGA_RNA-Seq WAC-ADAMTS12 WAC chr10 28824686 + ADAMTS12 chr5 33603830 - Exonic hg19 UCEC TCGA-A5-A0G5-01A 5 0 5'UTR-CDS Inter-chr p12.1 p13.2 55985 ChimerSeq STARFusion TCGA_RNA-Seq DHX16-LINC00243 DHX16 chr6 30638813 - LINC00243 chr6 30766549 - Exonic hg19 UCEC TCGA-A5-A0G5-01A 4 0 Out-of-frame Intra-chr p21.33 55986 ChimerSeq STARFusion TCGA_RNA-Seq NCOA5-CDH22 NCOA5 chr20 44693668 - CDH22 chr20 44806836 - Exonic hg19 UCEC TCGA-A5-A0G5-01A 4 0 In-Frame Intra-chr q13.12 Tumor suppressor gene q13.12 55987 ChimerSeq STARFusion TCGA_RNA-Seq PHF20-ABCG2 PHF20 chr20 34360001 + ABCG2 chr4 89042944 - Exonic hg19 UCEC TCGA-A5-A0G5-01A 4 0 5'UTR-CDS Inter-chr q11.22 Transcription factor q22.1 Tumor suppressor gene 55988 ChimerSeq STARFusion TCGA_RNA-Seq SLC46A3-IGH@ SLC46A3 chr13 29275057 - IGH@ chr14 106330467 - Exonic hg19 UCEC TCGA-A5-A0G5-01A 4 0 Out-of-frame Inter-chr q12.3 32.33 55989 ChimerSeq STARFusion TCGA_RNA-Seq SLC46A3-IGHJ4 SLC46A3 chr13 29275057 - IGHJ4 chr14 106330467 - Exonic hg19 UCEC TCGA-A5-A0G5-01A 4 0 Out-of-frame Inter-chr q12.3 55990 ChimerSeq STARFusion TCGA_RNA-Seq LRP8-RPL14 LRP8 chr1 53793512 - RPL14 chr3 40503543 + Exonic hg19 UCEC TCGA-FI-A2EY-01A 5 1 Out-of-frame Inter-chr p32.3 p22.1 55991 ChimerSeq STARFusion TCGA_RNA-Seq APLP2-IGH@ APLP2 chr11 130011912 + IGH@ chr14 106175005 - Exonic hg19 UCEC TCGA-B5-A3FA-01A 4 2 Out-of-frame Inter-chr q24.3 32.33 55992 ChimerSeq STARFusion TCGA_RNA-Seq BCAR1-CFDP1 BCAR1 chr16 75276368 - CFDP1 chr16 75339080 - Exonic hg19 UCEC TCGA-A5-A0G2-01A 10 0 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 55993 ChimerSeq STARFusion TCGA_RNA-Seq TRAPPC13-ERBB2IP TRAPPC13 chr5 64920933 + ERBB2IP chr5 65370852 + Exonic hg19 UCEC TCGA-A5-A0G2-01A 4 0 Out-of-frame Intra-chr q12.3 55994 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB12-NEU1 ZBTB12 chr6 31868874 - NEU1 chr6 31827099 - Exonic hg19 UCEC TCGA-A5-A0G2-01A 4 0 Out-of-frame Intra-chr p21.33 Transcription factor 55995 ChimerSeq STARFusion TCGA_RNA-Seq SHROOM4-ARID3A SHROOM4 chrX 50556902 - ARID3A chr19 960092 + Exonic hg19 UCEC TCGA-BK-A0CC-01A 29 37 In-Frame Inter-chr p11.22 p13.3 Transcription factor Seq+ 55996 ChimerSeq STARFusion TCGA_RNA-Seq LAD1-PKP1 LAD1 chr1 201355750 - PKP1 chr1 201300552 + Exonic hg19 UCEC TCGA-BK-A0CC-01A 4 15 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 55997 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-PHTF2 PTPN12 chr7 77236618 + PHTF2 chr7 77469538 + Exonic hg19 UCEC TCGA-BK-A0CC-01A 5 9 CDS-5'UTR Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 55998 ChimerSeq STARFusion TCGA_RNA-Seq ZBTB20-ZNF80 ZBTB20 chr3 114219199 - ZNF80 chr3 113954180 - Exonic hg19 UCEC TCGA-BK-A0CC-01A 4 4 5'UTR-3'UTR Intra-chr q13.31 Transcription factor q13.31 Transcription factor 55999 ChimerSeq STARFusion TCGA_RNA-Seq URI1-ARHGAP33 URI1 chr19 30433571 + ARHGAP33 chr19 36275074 + Exonic hg19 UCEC TCGA-BK-A0CC-01A 2 7 Out-of-frame Intra-chr q12 q13.12 Seq+ 56000 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V1H-RORC ATP6V1H chr8 54754138 - RORC chr1 151789756 - Exonic hg19 UCEC TCGA-BK-A0CC-01A 2 2 Out-of-frame Inter-chr q11.23 q21.3 Transcription factor Seq+ 56001 ChimerSeq STARFusion TCGA_RNA-Seq DNM2-ILF3 DNM2 chr19 10887892 + ILF3 chr19 10789289 + Exonic hg19 UCEC TCGA-E6-A1LZ-01A 7 0 In-Frame Intra-chr p13.2 p13.2 Seq+ 56002 ChimerSeq STARFusion TCGA_RNA-Seq ATE1-NSMCE4A ATE1 chr10 123681864 - NSMCE4A chr10 123716774 - Exonic hg19 UCEC TCGA-E6-A1LZ-01A 6 0 CDS-3'UTR Intra-chr q26.13 q26.13 Seq+ 56003 ChimerSeq STARFusion TCGA_RNA-Seq ZNF292-ORC3 ZNF292 chr6 87865477 + ORC3 chr6 88344563 + Exonic hg19 UCS TCGA-N5-A4R8 21 82 In-Frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q15 56004 ChimerSeq STARFusion TCGA_RNA-Seq EMP3-CKM EMP3 chr19 48825234 + CKM chr19 45818855 - Exonic hg19 UCS TCGA-N5-A4R8 13 81 5'UTR-CDS Intra-chr q13.33 q13.32 Seq+ 56005 ChimerSeq STARFusion TCGA_RNA-Seq ZNF292-ORC3 ZNF292 chr6 87865477 + ORC3 chr6 88362834 + Exonic hg19 UCS TCGA-N5-A4R8 3 82 Out-of-frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q15 56006 ChimerSeq STARFusion TCGA_RNA-Seq ZNF292-ORC3 ZNF292 chr6 87862587 + ORC3 chr6 88344563 + Exonic hg19 UCS TCGA-N5-A4R8 3 82 5'UTR-CDS Intra-chr q14.3 Tumor suppressor gene Transcription factor q15 56007 ChimerSeq STARFusion TCGA_RNA-Seq ZNF114-ETHE1 ZNF114 chr19 48775085 + ETHE1 chr19 44015718 - Exonic hg19 UCS TCGA-N5-A4R8 11 49 5'UTR-CDS Intra-chr q13.33 Transcription factor q13.31 Seq+ 56008 ChimerSeq STARFusion TCGA_RNA-Seq REV3L-FYN REV3L chr6 111803953 - FYN chr6 112101838 - Exonic hg19 UCS TCGA-N5-A4R8 9 50 CDS-5'UTR Intra-chr q21 q21 TK:Src Seq+ 56009 ChimerSeq STARFusion TCGA_RNA-Seq ATP2C1-NDUFB4 ATP2C1 chr3 130613619 + NDUFB4 chr3 120319958 + Exonic hg19 UCS TCGA-N5-A4R8 5 11 In-Frame Intra-chr q22.1 q13.33 Seq+ 56010 ChimerSeq STARFusion TCGA_RNA-Seq ZSWIM4-CCDC130 ZSWIM4 chr19 13930306 + CCDC130 chr19 13867011 + Exonic hg19 UCS TCGA-N5-A4R8 4 12 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 56011 ChimerSeq STARFusion TCGA_RNA-Seq ATP2C1-NDUFB4 ATP2C1 chr3 130569772 + NDUFB4 chr3 120319958 + Exonic hg19 UCS TCGA-N5-A4R8 3 11 In-Frame Intra-chr q22.1 q13.33 Seq+ 56012 ChimerSeq STARFusion TCGA_RNA-Seq STRBP-DENND1A STRBP chr9 126030715 - DENND1A chr9 126150137 - Exonic hg19 UCS TCGA-N5-A4R8 2 1 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 56013 ChimerSeq STARFusion TCGA_RNA-Seq MPPED1-SCFD2 MPPED1 chr22 43870841 + SCFD2 chr4 53740228 - Exonic hg19 UCS TCGA-NA-A4QY 27 86 Out-of-frame Inter-chr q13.2 q12 Seq+ 56014 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R13B-ADAM18 PPP1R13B chr14 104313636 - ADAM18 chr8 39463826 + Exonic hg19 UCS TCGA-NA-A4QY 3 7 In-Frame Inter-chr q32.33 Seq+ 56015 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-GCGR YWHAE chr17 1303341 - GCGR chr17 79766718 + Exonic hg19 UCS TCGA-N9-A4PZ 25 149 CDS-5'UTR Intra-chr p13.3 q25.3 Seq+ 56016 ChimerSeq STARFusion TCGA_RNA-Seq SETD2-PALMD SETD2 chr3 47205344 - PALMD chr1 100159575 + Exonic hg19 UCS TCGA-N9-A4PZ 38 76 Out-of-frame Inter-chr p21.31 Oncogene Tumor suppressor gene p21.2 Seq+ 56017 ChimerSeq STARFusion TCGA_RNA-Seq YWHAE-GCGR YWHAE chr17 1303341 - GCGR chr17 79768701 + Exonic hg19 UCS TCGA-N9-A4PZ 4 149 In-Frame Intra-chr p13.3 q25.3 Seq+ 56018 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R12C-CLEC11A PPP1R12C chr19 55610152 - CLEC11A chr19 51227162 + Exonic hg19 UCS TCGA-N9-A4PZ 22 37 In-Frame Intra-chr q13.42 q13.33 Seq+ 56019 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G3-LAMC1 EIF4G3 chr1 21377359 - LAMC1 chr1 183085712 + Exonic hg19 UCS TCGA-N9-A4PZ 16 51 5'UTR-CDS Intra-chr p36.12 q25.3 Seq+ 56020 ChimerSeq STARFusion TCGA_RNA-Seq EPHA2-LSM14B EPHA2 chr1 16474873 - LSM14B chr20 60699673 + Exonic hg19 UCS TCGA-N9-A4PZ 10 51 In-Frame Inter-chr p36.13 Tumor suppressor gene q13.33 Seq+ 56021 ChimerSeq STARFusion TCGA_RNA-Seq IVD-ECE1 IVD chr15 40705286 + ECE1 chr1 21586885 - Exonic hg19 UCS TCGA-N9-A4PZ 8 44 In-Frame Inter-chr q15.1 p36.12 Seq+ 56022 ChimerSeq STARFusion TCGA_RNA-Seq FAM73B-P4HB FAM73B chr9 131825910 + P4HB chr17 79805223 - Exonic hg19 UCS TCGA-N9-A4PZ 11 23 In-Frame Inter-chr q25.3 Seq+ 56023 ChimerSeq STARFusion TCGA_RNA-Seq NOSIP-RCN3 NOSIP chr19 50063191 - RCN3 chr19 50040290 + Exonic hg19 UCS TCGA-N9-A4PZ 5 41 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 56024 ChimerSeq STARFusion TCGA_RNA-Seq RBFOX2-TST RBFOX2 chr22 36424288 - TST chr22 37407366 - Exonic hg19 UCS TCGA-N9-A4PZ 8 27 Out-of-frame Intra-chr q12.3 Seq+ 56025 ChimerSeq STARFusion TCGA_RNA-Seq HTR7-VAC14 HTR7 chr10 92616890 - VAC14 chr16 70796928 - Exonic hg19 UCS TCGA-N9-A4PZ 6 27 In-Frame Inter-chr q23.31 q22.2 Seq+ 56026 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-C19orf26 SBNO2 chr19 1174171 - C19orf26 chr19 1234741 - Exonic hg19 UCS TCGA-N9-A4PZ 4 30 5'UTR-CDS Intra-chr p13.3 Seq+ 56027 ChimerSeq STARFusion TCGA_RNA-Seq NOL12-PES1 NOL12 chr22 38161824 + PES1 chr22 30988385 - Exonic hg19 UCS TCGA-N9-A4PZ 4 16 3'UTR-3'UTR Intra-chr q13.1 q12.2 56028 ChimerSeq STARFusion TCGA_RNA-Seq TRIOBP-PES1 TRIOBP chr22 38161824 + PES1 chr22 30988385 - Exonic hg19 UCS TCGA-N9-A4PZ 4 16 CDS-3'UTR Intra-chr q13.1 q12.2 Seq+ 56029 ChimerSeq STARFusion TCGA_RNA-Seq ASXL1-CCM2L ASXL1 chr20 30956926 + CCM2L chr20 30613659 + Exonic hg19 UCS TCGA-N9-A4PZ 4 11 Out-of-frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 56030 ChimerSeq STARFusion TCGA_RNA-Seq NCOA1-FAM228B NCOA1 chr2 24920667 + FAM228B chr2 24318011 + Exonic hg19 UCS TCGA-N9-A4PZ 3 15 Out-of-frame Intra-chr p23.3 Oncogene Transcription factor p23.3 Seq+ 56031 ChimerSeq STARFusion TCGA_RNA-Seq GTF2IRD1-POLD2 GTF2IRD1 chr7 73960139 + POLD2 chr7 44161708 - Exonic hg19 UCS TCGA-N9-A4PZ 2 18 In-Frame Intra-chr q11.23 Transcription factor p13 Seq+ 56032 ChimerSeq STARFusion TCGA_RNA-Seq RHPN2-MACROD1 RHPN2 chr19 33517410 - MACROD1 chr11 63919865 - Exonic hg19 UCS TCGA-N9-A4PZ 2 2 Out-of-frame Inter-chr q13.11 q13.1 Seq+ 56033 ChimerSeq STARFusion TCGA_RNA-Seq RHPN2-MACROD1 RHPN2 chr19 33517410 - MACROD1 chr11 63918827 - Exonic hg19 UCS TCGA-N9-A4PZ 2 2 Out-of-frame Inter-chr q13.11 q13.1 Seq+ 56034 ChimerSeq STARFusion TCGA_RNA-Seq SMAD7-DYM SMAD7 chr18 46468851 - DYM chr18 46570574 - Exonic hg19 UCS TCGA-NA-A4RO 26 106 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 56035 ChimerSeq STARFusion TCGA_RNA-Seq C7orf50-MAD1L1 C7orf50 chr7 1166893 - MAD1L1 chr7 1855864 - Exonic hg19 UCS TCGA-NA-A4RO 21 107 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 56036 ChimerSeq STARFusion TCGA_RNA-Seq DVL1-OPTN DVL1 chr1 1284276 - OPTN chr10 13154453 + Exonic hg19 UCS TCGA-NA-A4RO 9 36 Out-of-frame Inter-chr p36.33 p13 Seq+ 56037 ChimerSeq STARFusion TCGA_RNA-Seq ANKHD1-CYSTM1 ANKHD1 chr5 139903825 + CYSTM1 chr5 139622890 + Exonic hg19 UCS TCGA-NA-A4RO 5 44 In-Frame Intra-chr q31.3 q31.3 56038 ChimerSeq STARFusion TCGA_RNA-Seq ABHD14B-POC1A ABHD14B chr3 52007981 - POC1A chr3 52130728 - Exonic hg19 UCS TCGA-NA-A4RO 2 48 Out-of-frame Intra-chr p21.2 p21.2 Seq+ 56039 ChimerSeq STARFusion TCGA_RNA-Seq ATAD3C-HSPA14 ATAD3C chr1 1394611 + HSPA14 chr10 14909082 + Exonic hg19 UCS TCGA-NA-A4RO 4 37 Out-of-frame Inter-chr p36.33 p13 Seq+ 56040 ChimerSeq STARFusion TCGA_RNA-Seq PRPF18-LINC00708 PRPF18 chr10 13629152 + LINC00708 chr10 8302913 - Exonic hg19 UCS TCGA-NA-A4RO 3 33 Out-of-frame Intra-chr p13 p14 56041 ChimerSeq STARFusion TCGA_RNA-Seq GNB1-CDK11B GNB1 chr1 1822259 - CDK11B chr1 1588948 - Exonic hg19 UCS TCGA-NA-A4RO 7 9 5'UTR-5'UTR Intra-chr p36.33 p36.33 Seq+ 56042 ChimerSeq STARFusion TCGA_RNA-Seq SEC23B-DZANK1 SEC23B chr20 18523816 + DZANK1 chr20 18414409 - Exonic hg19 UCS TCGA-NA-A4RO 2 5 In-Frame Intra-chr p11.23 p11.23 Seq+ 56043 ChimerSeq STARFusion TCGA_RNA-Seq C2CD2-SH3BGRL C2CD2 chr21 43362256 - SH3BGRL chrX 80532483 + Exonic hg19 UCS TCGA-ND-A4W6 2 14 In-Frame Inter-chr q22.3 q21.1 Seq+ 56044 ChimerSeq STARFusion TCGA_RNA-Seq HLCS-ATP5O HLCS chr21 38334336 - ATP5O chr21 35288281 - Exonic hg19 UCS TCGA-ND-A4W6 3 8 5'UTR-5'UTR Intra-chr q22.13 q22.11 Seq+ 56045 ChimerSeq STARFusion TCGA_RNA-Seq TOM1L2-GALK1 TOM1L2 chr17 17875576 - GALK1 chr17 73747818 - Exonic hg19 UCS TCGA-ND-A4W6 2 12 CDS-3'UTR Intra-chr p11.2 Tumor suppressor gene q25.1 Seq+ 56046 ChimerSeq STARFusion TCGA_RNA-Seq ELK1-PCBP3 ELK1 chrX 47509822 - PCBP3 chr21 47269875 + Exonic hg19 UCS TCGA-ND-A4W6 2 4 5'UTR-5'UTR Inter-chr p11.23 Transcription factor q22.3 Seq+ 56047 ChimerSeq STARFusion TCGA_RNA-Seq HBG2-HBE1 HBG2 chr11 5526581 - HBE1 chr11 5291386 - Exonic hg19 UCS TCGA-ND-A4W6 2 1 Out-of-frame Intra-chr p15.4 p15.4 56048 ChimerSeq STARFusion TCGA_RNA-Seq MCM5-HMOX1 MCM5 chr22 35796598 + HMOX1 chr22 35789461 + Exonic hg19 UCS TCGA-N6-A4V9 15 130 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 56049 ChimerSeq STARFusion TCGA_RNA-Seq MARK3-TSGA10IP MARK3 chr14 103923549 + TSGA10IP chr11 65713186 + Exonic hg19 UCS TCGA-N6-A4V9 8 59 Out-of-frame Inter-chr q32.32 CAMK:CAMKL q13.1 Seq+ 56050 ChimerSeq STARFusion TCGA_RNA-Seq LMBR1L-TUBA1B LMBR1L chr12 49497470 - TUBA1B chr12 49523505 - Exonic hg19 UCS TCGA-N6-A4V9 9 39 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 56051 ChimerSeq STARFusion TCGA_RNA-Seq BIRC6-SLC30A6 BIRC6 chr2 32774548 + SLC30A6 chr2 32409342 + Exonic hg19 UCS TCGA-N6-A4V9 5 49 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 56052 ChimerSeq STARFusion TCGA_RNA-Seq LMBR1L-TUBA1B LMBR1L chr12 49504267 - TUBA1B chr12 49523505 - Exonic hg19 UCS TCGA-N6-A4V9 3 39 In-Frame Intra-chr q13.12 q13.12 Seq+ 56053 ChimerSeq STARFusion TCGA_RNA-Seq CRBN-COL24A1 CRBN chr3 3195108 - COL24A1 chr1 86482887 - Exonic hg19 UCS TCGA-N6-A4V9 4 2 Out-of-frame Inter-chr p26.2 Oncogene p22.3 56054 ChimerSeq STARFusion TCGA_RNA-Seq CD81-ARMC3 CD81 chr11 2398845 + ARMC3 chr10 23321790 + Exonic hg19 UCS TCGA-NA-A5I1 15 108 Out-of-frame Inter-chr p15.5 p12.2 Seq+ 56055 ChimerSeq STARFusion TCGA_RNA-Seq LRP1-SLC39A5 LRP1 chr12 57522814 + SLC39A5 chr12 56624988 + Exonic hg19 UCS TCGA-NA-A5I1 12 90 CDS-5'UTR Intra-chr q13.3 q13.3 Seq+ 56056 ChimerSeq STARFusion TCGA_RNA-Seq CD81-ARMC3 CD81 chr11 2398845 + ARMC3 chr10 23326199 + Exonic hg19 UCS TCGA-NA-A5I1 4 108 In-Frame Inter-chr p15.5 p12.2 Seq+ 56057 ChimerSeq STARFusion TCGA_RNA-Seq USP37-NHEJ1 USP37 chr2 219427396 - NHEJ1 chr2 219942928 - Exonic hg19 UCS TCGA-NA-A5I1 11 78 5'UTR-CDS Intra-chr q35 q35 Seq+ 56058 ChimerSeq STARFusion TCGA_RNA-Seq USP37-SLC23A3 USP37 chr2 219427396 - SLC23A3 chr2 219942928 - Exonic hg19 UCS TCGA-NA-A5I1 11 78 5'UTR-3'UTR Intra-chr q35 q35 56059 ChimerSeq STARFusion TCGA_RNA-Seq CD81-ARMC3 CD81 chr11 2397587 + ARMC3 chr10 23321790 + Exonic hg19 UCS TCGA-NA-A5I1 3 108 5'UTR-CDS Inter-chr p15.5 p12.2 Seq+ 56060 ChimerSeq STARFusion TCGA_RNA-Seq CD81-ARMC3 CD81 chr11 2397587 + ARMC3 chr10 23326199 + Exonic hg19 UCS TCGA-NA-A5I1 2 108 5'UTR-CDS Inter-chr p15.5 p12.2 Seq+ 56061 ChimerSeq STARFusion TCGA_RNA-Seq LRP1-SLC39A5 LRP1 chr12 57524938 + SLC39A5 chr12 56624988 + Exonic hg19 UCS TCGA-NA-A5I1 3 90 CDS-5'UTR Intra-chr q13.3 q13.3 Seq+ 56062 ChimerSeq STARFusion TCGA_RNA-Seq LRP1-SLC39A5 LRP1 chr12 57522814 + SLC39A5 chr12 56630366 + Exonic hg19 UCS TCGA-NA-A5I1 3 90 In-Frame Intra-chr q13.3 q13.3 Seq+ 56063 ChimerSeq STARFusion TCGA_RNA-Seq USP37-NHEJ1 USP37 chr2 219427441 - NHEJ1 chr2 219942928 - Exonic hg19 UCS TCGA-NA-A5I1 6 78 5'UTR-CDS Intra-chr q35 q35 Seq+ 56064 ChimerSeq STARFusion TCGA_RNA-Seq USP37-SLC23A3 USP37 chr2 219427441 - SLC23A3 chr2 219942928 - Exonic hg19 UCS TCGA-NA-A5I1 6 78 Out-of-frame Intra-chr q35 q35 56065 ChimerSeq STARFusion TCGA_RNA-Seq LRP1-SLC39A5 LRP1 chr12 57522814 + SLC39A5 chr12 56630180 + Exonic hg19 UCS TCGA-NA-A5I1 2 90 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 56066 ChimerSeq STARFusion TCGA_RNA-Seq NPEPPS-CREB3L1 NPEPPS chr17 45623359 + CREB3L1 chr11 46341815 + Exonic hg19 UCS TCGA-NA-A5I1 13 20 In-Frame Inter-chr q21.32 p11.2 Tumor suppressor gene Transcription factor Seq+ 56067 ChimerSeq STARFusion TCGA_RNA-Seq DNMT3B-COMMD7 DNMT3B chr20 31369220 + COMMD7 chr20 31315949 - Exonic hg19 UCS TCGA-NA-A5I1 6 46 In-Frame Intra-chr q11.21 Tumor suppressor gene q11.21 Seq+ 56068 ChimerSeq STARFusion TCGA_RNA-Seq SOS2-POLN SOS2 chr14 50697915 - POLN chr4 2176478 - Exonic hg19 UCS TCGA-NA-A5I1 4 32 In-Frame Inter-chr q21.3 p16.3 Seq+ 56069 ChimerSeq STARFusion TCGA_RNA-Seq RNF213-PPP1R27 RNF213 chr17 78314156 + PPP1R27 chr17 79792709 - Exonic hg19 UCS TCGA-NA-A5I1 5 27 Out-of-frame Intra-chr q25.3 Oncogene q25.3 Seq+ 56070 ChimerSeq STARFusion TCGA_RNA-Seq SOS2-POLN SOS2 chr14 50697915 - POLN chr4 2178061 - Exonic hg19 UCS TCGA-NA-A5I1 3 32 In-Frame Inter-chr q21.3 p16.3 Seq+ 56071 ChimerSeq STARFusion TCGA_RNA-Seq CTCF-PSKH1 CTCF chr16 67605167 + PSKH1 chr16 67942583 + Exonic hg19 UCS TCGA-NA-A5I1 2 26 5'UTR-5'UTR Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 CAMK:PSK Seq+ 56072 ChimerSeq STARFusion TCGA_RNA-Seq RNF213-UVSSA RNF213 chr17 78308070 + UVSSA chr4 1345503 + Exonic hg19 UCS TCGA-NA-A5I1 3 2 Out-of-frame Inter-chr q25.3 Oncogene p16.3 Seq+ 56073 ChimerSeq STARFusion TCGA_RNA-Seq PDCD10-HSF1 PDCD10 chr3 167452594 - HSF1 chr8 145537509 + Exonic hg19 UCS TCGA-NA-A5I1 2 4 5'UTR-CDS Inter-chr q26.1 q24.3 Transcription factor Seq+ 56074 ChimerSeq STARFusion TCGA_RNA-Seq RSPO1-IGF2 RSPO1 chr1 38077353 - IGF2 chr11 2151403 - Exonic hg19 UCS TCGA-NA-A5I1 3 0 Out-of-frame Inter-chr p34.3 p15.5 Oncogene 56075 ChimerSeq STARFusion TCGA_RNA-Seq SLC7A6-C16orf70 SLC7A6 chr16 68300624 + C16orf70 chr16 67165189 + Exonic hg19 UCS TCGA-NA-A5I1 2 4 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 56076 ChimerSeq STARFusion TCGA_RNA-Seq TPT1-EZR TPT1 chr13 45914859 - EZR chr6 159190384 - Exonic hg19 UCS TCGA-NG-A4VW 3 1 Out-of-frame Inter-chr q14.13 q25.3 56077 ChimerSeq STARFusion TCGA_RNA-Seq COX6B1-LIG1 COX6B1 chr19 36145573 + LIG1 chr19 48626575 - Exonic hg19 UCS TCGA-NG-A4VW 2 2 In-Frame Intra-chr q13.12 q13.33 Tumor suppressor gene 56078 ChimerSeq STARFusion TCGA_RNA-Seq CD44-CAPRIN1 CD44 chr11 35160917 + CAPRIN1 chr11 34110942 + Exonic hg19 UCS TCGA-NG-A4VU 46 290 In-Frame Intra-chr p13 Oncogene Tumor suppressor gene p13 Seq+ 56079 ChimerSeq STARFusion TCGA_RNA-Seq C2orf15-TSGA10 C2orf15 chr2 99804720 + TSGA10 chr2 99743639 - Exonic hg19 UCS TCGA-NG-A4VU 14 51 3'UTR-5'UTR Intra-chr q11.2 q11.2 Seq+ 56080 ChimerSeq STARFusion TCGA_RNA-Seq MRPL30-TSGA10 MRPL30 chr2 99804720 + TSGA10 chr2 99743639 - Exonic hg19 UCS TCGA-NG-A4VU 14 51 5'UTR-5'UTR Intra-chr q11.2 q11.2 56081 ChimerSeq STARFusion TCGA_RNA-Seq MRPL30-TSGA10 MRPL30 chr2 99804720 + TSGA10 chr2 99743639 - Exonic hg19 UCS TCGA-NG-A4VU 14 49 5'UTR-5'UTR Intra-chr q11.2 q11.2 56082 ChimerSeq STARFusion TCGA_RNA-Seq RRBP1-BFSP1 RRBP1 chr20 17660644 - BFSP1 chr20 17541223 - Exonic hg19 UCS TCGA-NG-A4VU 2 73 5'UTR-5'UTR Intra-chr p12.1 p12.1 Seq+ 56083 ChimerSeq STARFusion TCGA_RNA-Seq RRBP1-BFSP1 RRBP1 chr20 17660644 - BFSP1 chr20 17505553 - Exonic hg19 UCS TCGA-NG-A4VU 2 73 5'UTR-CDS Intra-chr p12.1 p12.1 Seq+ 56084 ChimerSeq STARFusion TCGA_RNA-Seq PON2-TYW1B PON2 chr7 95053827 - TYW1B chr7 72040704 - Exonic hg19 UCS TCGA-NG-A4VU 2 65 Out-of-frame Intra-chr q21.3 q11.23 Seq+ 56085 ChimerSeq STARFusion TCGA_RNA-Seq FRAS1-ART3 FRAS1 chr4 78987170 + ART3 chr4 77033539 + Exonic hg19 UCS TCGA-NG-A4VU 2 13 Out-of-frame Intra-chr q21.21 q21.1 Seq+ 56086 ChimerSeq STARFusion TCGA_RNA-Seq C1orf198-AGT C1orf198 chr1 230979100 - AGT chr1 230846599 - Exonic hg19 UCS TCGA-NG-A4VU 3 3 CDS-5'UTR Intra-chr q42.2 q42.2 Seq+ 56087 ChimerSeq STARFusion TCGA_RNA-Seq NCK2-C2orf40 NCK2 chr2 106498505 + C2orf40 chr2 106694221 + Exonic hg19 UCS TCGA-NG-A4VU 2 3 In-Frame Intra-chr q12.2 q12.2 Tumor suppressor gene 56088 ChimerSeq STARFusion TCGA_RNA-Seq NRG1-PMEPA1 NRG1 chr8 31498245 + PMEPA1 chr20 56234753 - Exonic hg19 UCS TCGA-ND-A4WA 6 23 In-Frame Inter-chr p12 q13.31 Seq+ 56089 ChimerSeq STARFusion TCGA_RNA-Seq CFLAR-NDUFB3 CFLAR chr2 202014558 + NDUFB3 chr2 201950182 + Exonic hg19 UCS TCGA-QN-A5NN 4 6 Out-of-frame Intra-chr q33.1 q33.1 Seq+ 56090 ChimerSeq STARFusion TCGA_RNA-Seq DSCR4-KCNJ6 DSCR4 chr21 39492401 - KCNJ6 chr21 39213011 - Exonic hg19 UCS TCGA-ND-A4WC 2 1 CDS-5'UTR Intra-chr q22.13 q22.13 56091 ChimerSeq STARFusion TCGA_RNA-Seq NOTCH2NL-HFE2 NOTCH2NL chr1 145209436 + HFE2 chr1 145415279 + Exonic hg19 UCS TCGA-N8-A4PI 3 18 5'UTR-5'UTR Intra-chr q21.1 q21.1 Seq+ 56092 ChimerSeq STARFusion TCGA_RNA-Seq ITGB8-ABCB5 ITGB8 chr7 20421508 + ABCB5 chr7 20815598 + Exonic hg19 UCS TCGA-N8-A4PI 4 11 CDS-3'UTR Intra-chr p21.1 p21.1 Seq+ 56093 ChimerSeq STARFusion TCGA_RNA-Seq SLC3A2-ASRGL1 SLC3A2 chr11 62639141 + ASRGL1 chr11 62156605 + Exonic hg19 UCS TCGA-N8-A4PI 2 18 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 56094 ChimerSeq STARFusion TCGA_RNA-Seq CCND3-LUZP1 CCND3 chr6 42016239 - LUZP1 chr1 23415546 - Exonic hg19 UCS TCGA-N8-A4PI 2 4 5'UTR-CDS Inter-chr p21.1 p36.12 Seq+ 56095 ChimerSeq STARFusion TCGA_RNA-Seq INTS6-NEK5 INTS6 chr13 52025161 - NEK5 chr13 52611354 - Exonic hg19 UCS TCGA-N8-A4PI 2 2 CDS-3'UTR Intra-chr q14.3 Tumor suppressor gene q14.3 Other:NEK Seq+ 56096 ChimerSeq STARFusion TCGA_RNA-Seq BHLHB9-LINC00630 BHLHB9 chrX 101975955 + LINC00630 chrX 102094729 + Exonic hg19 UCS TCGA-N8-A4PI 2 1 Out-of-frame Intra-chr q22.1 q22.1 56097 ChimerSeq STARFusion TCGA_RNA-Seq NUDT2-PRSS3 NUDT2 chr9 34339164 + PRSS3 chr9 33796641 + Exonic hg19 UCS TCGA-N8-A4PI 2 1 In-Frame Intra-chr p13.3 p13.3 56098 ChimerSeq STARFusion TCGA_RNA-Seq CFLAR-NDUFB3 CFLAR chr2 201981204 + NDUFB3 chr2 201950182 + Exonic hg19 UCS TCGA-N5-A59E 16 67 5'UTR-CDS Intra-chr q33.1 q33.1 Seq+ 56099 ChimerSeq STARFusion TCGA_RNA-Seq KHDRBS1-NDC1 KHDRBS1 chr1 32479978 + NDC1 chr1 54238162 - Exonic hg19 UCS TCGA-N5-A59E 4 23 Out-of-frame Intra-chr p35.2 p32.3 Seq+ 56100 ChimerSeq STARFusion TCGA_RNA-Seq OSBPL10-STX8 OSBPL10 chr3 31917925 - STX8 chr17 9153962 - Exonic hg19 UCS TCGA-N5-A59E 2 22 Out-of-frame Inter-chr p22.3 p13.1 Seq+ 56101 ChimerSeq STARFusion TCGA_RNA-Seq PAIP2-CXXC5 PAIP2 chr5 138677669 + CXXC5 chr5 139059949 + Exonic hg19 UCS TCGA-N5-A59E 4 10 5'UTR-5'UTR Intra-chr q31.2 Tumor suppressor gene q31.2 Tumor suppressor gene Transcription factor Seq+ 56102 ChimerSeq STARFusion TCGA_RNA-Seq IRAK1BP1-C20orf112 IRAK1BP1 chr6 79612827 + C20orf112 chr20 31136688 - Exonic hg19 UCS TCGA-N5-A59E 2 11 Out-of-frame Inter-chr q14.1 56103 ChimerSeq STARFusion TCGA_RNA-Seq KRT80-C12orf80 KRT80 chr12 52574297 - C12orf80 chr12 52599963 - Exonic hg19 UCS TCGA-N5-A59E 2 10 Out-of-frame Intra-chr q13.13 q13.13 56104 ChimerSeq STARFusion TCGA_RNA-Seq USP38-TMEM154 USP38 chr4 144109114 + TMEM154 chr4 153549713 - Exonic hg19 UCS TCGA-N5-A59E 3 4 In-Frame Intra-chr q31.21 q31.3 Seq+ 56105 ChimerSeq STARFusion TCGA_RNA-Seq RNF217-TPD52L1 RNF217 chr6 125379252 + TPD52L1 chr6 125583980 + Exonic hg19 UCS TCGA-N5-A59E 3 1 In-Frame Intra-chr q22.31 q22.31 56106 ChimerSeq STARFusion TCGA_RNA-Seq QRICH1-LAMB2 QRICH1 chr3 49094295 - LAMB2 chr3 49170301 - Exonic hg19 UCS TCGA-N5-A59E 3 0 CDS-5'UTR Intra-chr p21.31 p21.31 56107 ChimerSeq STARFusion TCGA_RNA-Seq DNM1-DDX39B DNM1 chr9 130996386 + DDX39B chr6 31499182 - Exonic hg19 UCS TCGA-N5-A59E 2 1 In-Frame Inter-chr q34.11 56108 ChimerSeq STARFusion TCGA_RNA-Seq FANCI-HADHB FANCI chr15 89817535 + HADHB chr2 26492821 + Exonic hg19 UCS TCGA-N5-A59F 9 20 In-Frame Inter-chr q26.1 p23.3 Seq+ 56109 ChimerSeq STARFusion TCGA_RNA-Seq CUEDC2-POLR3A CUEDC2 chr10 104192283 - POLR3A chr10 79740031 - Exonic hg19 UCS TCGA-N5-A59F 5 12 5'UTR-CDS Intra-chr q24.32 q22.3 Seq+ 56110 ChimerSeq STARFusion TCGA_RNA-Seq STRA6-NDUFAF1 STRA6 chr15 74476197 - NDUFAF1 chr15 41679791 - Exonic hg19 UCS TCGA-N5-A59F 3 14 Out-of-frame Intra-chr q24.1 q15.1 Seq+ 56111 ChimerSeq STARFusion TCGA_RNA-Seq TANC1-OR7E28P TANC1 chr2 159857701 + OR7E28P chr2 159718918 + Exonic hg19 UCS TCGA-N5-A59F 3 13 Out-of-frame Intra-chr q24.2 q24.1 56112 ChimerSeq STARFusion TCGA_RNA-Seq SKI-ATAD3A SKI chr1 2161174 + ATAD3A chr1 1454301 + Exonic hg19 UCS TCGA-N5-A59F 3 11 In-Frame Intra-chr p36.33 Transcription factor p36.33 Seq+ 56113 ChimerSeq STARFusion TCGA_RNA-Seq DDC8-G6PC3 DDC8 chr17 76869901 - G6PC3 chr17 42151528 + Exonic hg19 UCS TCGA-N5-A59F 2 11 Out-of-frame Intra-chr q21.31 56114 ChimerSeq STARFusion TCGA_RNA-Seq TIMP2-G6PC3 TIMP2 chr17 76869901 - G6PC3 chr17 42151528 + Exonic hg19 UCS TCGA-N5-A59F 2 11 Out-of-frame Intra-chr q25.3 q21.31 Seq+ 56115 ChimerSeq STARFusion TCGA_RNA-Seq ARG2-RAD51B ARG2 chr14 68087683 + RAD51B chr14 68758601 + Exonic hg19 UCS TCGA-N5-A59F 2 2 5'UTR-CDS Intra-chr q24.1 q24.1 56116 ChimerSeq STARFusion TCGA_RNA-Seq TTLL1-PACSIN2 TTLL1 chr22 43442416 - PACSIN2 chr22 43308163 - Exonic hg19 UCS TCGA-NF-A4WU 2 1 CDS-5'UTR Intra-chr q13.2 q13.2 56117 ChimerSeq STARFusion TCGA_RNA-Seq AP2A2-TMEM80 AP2A2 chr11 926088 + TMEM80 chr11 698869 + Exonic hg19 UCS TCGA-N6-A4VG 28 84 In-Frame Intra-chr p15.5 p15.5 Seq+ 56118 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC1-MAP4 SMARCC1 chr3 47702784 - MAP4 chr3 47969840 - Exonic hg19 UCS TCGA-N6-A4VG 15 56 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 56119 ChimerSeq STARFusion TCGA_RNA-Seq KIF3B-LINC00028 KIF3B chr20 30865568 + LINC00028 chr20 30074835 + Exonic hg19 UCS TCGA-N6-A4VG 21 9 5'UTR-5'UTR Intra-chr q11.21 q11.21 Seq+ 56120 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC1-MAP4 SMARCC1 chr3 47702784 - MAP4 chr3 47963368 - Exonic hg19 UCS TCGA-N6-A4VG 2 56 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 56121 ChimerSeq STARFusion TCGA_RNA-Seq SMARCA4-RNF216 SMARCA4 chr19 11152236 + RNF216 chr7 5800769 - Exonic hg19 UCS TCGA-N6-A4VG 5 41 CDS-5'UTR Inter-chr p13.2 Oncogene Tumor suppressor gene p22.1 Seq+ 56122 ChimerSeq STARFusion TCGA_RNA-Seq YTHDF2-EYA3 YTHDF2 chr1 29070498 + EYA3 chr1 28304985 - Exonic hg19 UCS TCGA-N6-A4VG 4 38 Out-of-frame Intra-chr p35.3 p35.3 Seq+ 56123 ChimerSeq STARFusion TCGA_RNA-Seq IQGAP1-ZNF774 IQGAP1 chr15 90934105 + ZNF774 chr15 90897874 + Exonic hg19 UCS TCGA-N6-A4VG 3 22 CDS-5'UTR Intra-chr q26.1 q26.1 Transcription factor Seq+ 56124 ChimerSeq STARFusion TCGA_RNA-Seq NRF1-STRIP2 NRF1 chr7 129367205 + STRIP2 chr7 129110490 + Exonic hg19 UCS TCGA-N6-A4VG 2 23 Out-of-frame Intra-chr q32.2 Tumor suppressor gene Transcription factor q32.1 56125 ChimerSeq STARFusion TCGA_RNA-Seq NVL-WDR26 NVL chr1 224499502 - WDR26 chr1 224577562 - Exonic hg19 UCS TCGA-N6-A4VG 2 20 Out-of-frame Intra-chr q42.11 q42.12 Seq+ 56126 ChimerSeq STARFusion TCGA_RNA-Seq WDR82-GLT8D1 WDR82 chr3 52318544 - GLT8D1 chr3 52734512 - Exonic hg19 UCS TCGA-N6-A4VG 3 16 5'UTR-5'UTR Intra-chr p21.2 p21.1 Seq+ 56127 ChimerSeq STARFusion TCGA_RNA-Seq KPNA3-SPRYD7 KPNA3 chr13 50366574 - SPRYD7 chr13 50505270 - Exonic hg19 UCS TCGA-N6-A4VG 3 15 Out-of-frame Intra-chr q14.2 q14.2 Seq+ 56128 ChimerSeq STARFusion TCGA_RNA-Seq PTPN11-CUX2 PTPN11 chr12 112910844 + CUX2 chr12 111779584 + Exonic hg19 UCS TCGA-N6-A4VG 3 9 In-Frame Intra-chr q24.13 Oncogene Tumor suppressor gene q24.11 Transcription factor Seq+ 56129 ChimerSeq STARFusion TCGA_RNA-Seq PITPNM2-MPHOSPH9 PITPNM2 chr12 123477046 - MPHOSPH9 chr12 123687922 - Exonic hg19 UCS TCGA-N6-A4VG 2 6 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 56130 ChimerSeq STARFusion TCGA_RNA-Seq NUP210-XPC NUP210 chr3 13364809 - XPC chr3 14214562 - Exonic hg19 UCS TCGA-N6-A4VG 2 1 In-Frame Intra-chr p25.1 p25.1 Oncogene 56131 ChimerSeq STARFusion TCGA_RNA-Seq MSI2-CISD3 MSI2 chr17 55478832 + CISD3 chr17 36887013 + Exonic hg19 UCS TCGA-N8-A4PL 38 178 In-Frame Intra-chr q22 Seq+ 56132 ChimerSeq STARFusion TCGA_RNA-Seq KIF3C-SRM KIF3C chr2 26203242 - SRM chr1 11119402 - Exonic hg19 UCS TCGA-N8-A4PL 4 33 Out-of-frame Inter-chr p23.3 p36.22 TK:Src Seq+ 56133 ChimerSeq STARFusion TCGA_RNA-Seq KIF3C-SRM KIF3C chr2 26203242 - SRM chr1 11119437 - Exonic hg19 UCS TCGA-N8-A4PL 4 33 Out-of-frame Inter-chr p23.3 p36.22 TK:Src Seq+ 56134 ChimerSeq STARFusion TCGA_RNA-Seq CABIN1-SLC2A11 CABIN1 chr22 24515665 + SLC2A11 chr22 24224646 + Exonic hg19 UCS TCGA-N8-A4PL 2 19 Out-of-frame Intra-chr q11.23 Seq+ 56135 ChimerSeq STARFusion TCGA_RNA-Seq RAB33B-NAA15 RAB33B chr4 140375598 + NAA15 chr4 140255328 + Exonic hg19 UCS TCGA-N8-A4PL 2 8 In-Frame Intra-chr q31.1 q31.1 Seq+ 56136 ChimerSeq STARFusion TCGA_RNA-Seq UBE2G1-PPIL2 UBE2G1 chr17 4269566 - PPIL2 chr22 22024202 + Exonic hg19 UCS TCGA-NF-A5CP 9 52 Out-of-frame Inter-chr p13.2 q11.21 Seq+ 56137 ChimerSeq STARFusion TCGA_RNA-Seq ZNF423-NCEH1 ZNF423 chr16 49823398 - NCEH1 chr3 172351882 - Exonic hg19 UCS TCGA-NF-A5CP 6 13 Out-of-frame Inter-chr q12.1 Transcription factor q26.31 Seq+ 56138 ChimerSeq STARFusion TCGA_RNA-Seq EP400-TRIM29 EP400 chr12 132562119 + TRIM29 chr11 119989029 - Exonic hg19 UCS TCGA-NF-A5CP 4 16 Out-of-frame Inter-chr q24.33 Oncogene q23.3 Seq+ 56139 ChimerSeq STARFusion TCGA_RNA-Seq POM121C-HIP1 POM121C chr7 75066793 - HIP1 chr7 75228565 - Exonic hg19 UCS TCGA-NF-A5CP 2 9 In-Frame Intra-chr q11.23 q11.23 Seq+ 56140 ChimerSeq STARFusion TCGA_RNA-Seq JHDM1D-DENND2A JHDM1D chr7 139818913 - DENND2A chr7 140302342 - Exonic hg19 UCS TCGA-NF-A5CP 2 2 CDS-5'UTR Intra-chr q34 Seq+ 56141 ChimerSeq STARFusion TCGA_RNA-Seq ACKR2-FAM198A ACKR2 chr3 42880771 + FAM198A chr3 43073759 + Exonic hg19 UCS TCGA-NF-A5CP 2 1 Out-of-frame Intra-chr p22.1 p22.1 56142 ChimerSeq STARFusion TCGA_RNA-Seq PPARA-ATXN10 PPARA chr22 46594488 + ATXN10 chr22 46238871 + Exonic hg19 UCS TCGA-N7-A4Y8 12 56 In-Frame Intra-chr q13.31 Tumor suppressor gene Transcription factor q13.31 Seq+ 56143 ChimerSeq STARFusion TCGA_RNA-Seq CAPZB-TMCO4 CAPZB chr1 19811930 - TMCO4 chr1 20027378 - Exonic hg19 UCS TCGA-N7-A4Y8 4 17 Out-of-frame Intra-chr p36.13 p36.13 Seq+ 56144 ChimerSeq STARFusion TCGA_RNA-Seq CAPZB-TMCO4 CAPZB chr1 19810684 - TMCO4 chr1 20027378 - Exonic hg19 UCS TCGA-N7-A4Y8 2 17 3'UTR-CDS Intra-chr p36.13 p36.13 Seq+ 56145 ChimerSeq STARFusion TCGA_RNA-Seq C2orf68-USP39 C2orf68 chr2 85836558 - USP39 chr2 85852662 + Exonic hg19 UCS TCGA-N7-A4Y8 4 2 In-Frame Intra-chr p11.2 p11.2 56146 ChimerSeq STARFusion TCGA_RNA-Seq ZMYND8-WFDC2 ZMYND8 chr20 45976600 - WFDC2 chr20 44108582 + Exonic hg19 UCS TCGA-N7-A4Y8 2 6 In-Frame Intra-chr q13.12 q13.12 Seq+ 56147 ChimerSeq STARFusion TCGA_RNA-Seq SERINC3-NCOA5 SERINC3 chr20 43139930 - NCOA5 chr20 44691528 - Exonic hg19 UCS TCGA-N8-A4PN 30 186 In-Frame Intra-chr q13.12 q13.12 Tumor suppressor gene Seq+ 56148 ChimerSeq STARFusion TCGA_RNA-Seq DLGAP4-TP53TG5 DLGAP4 chr20 35091002 + TP53TG5 chr20 44006253 - Exonic hg19 UCS TCGA-N8-A4PN 39 149 Out-of-frame Intra-chr q11.23 q13.12 Seq+ 56149 ChimerSeq STARFusion TCGA_RNA-Seq FAM212B-BCAS4 FAM212B chr1 112281808 - BCAS4 chr20 49493023 + Exonic hg19 UCS TCGA-N8-A4PN 31 126 In-Frame Inter-chr p13.2 q13.13 Seq+ 56150 ChimerSeq STARFusion TCGA_RNA-Seq DLGAP4-TP53TG5 DLGAP4 chr20 35089913 + TP53TG5 chr20 44006253 - Exonic hg19 UCS TCGA-N8-A4PN 20 149 5'UTR-CDS Intra-chr q11.23 q13.12 Seq+ 56151 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPM-MCOLN1 HNRNPM chr19 8527465 + MCOLN1 chr19 7592406 + Exonic hg19 UCS TCGA-N8-A4PN 23 85 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 56152 ChimerSeq STARFusion TCGA_RNA-Seq TSHZ2-TOX2 TSHZ2 chr20 51589872 + TOX2 chr20 42602007 + Exonic hg19 UCS TCGA-N8-A4PN 12 31 Out-of-frame Intra-chr q13.2 Transcription factor q13.12 Seq+ 56153 ChimerSeq STARFusion TCGA_RNA-Seq PAK4-RPGR PAK4 chr19 39616559 + RPGR chrX 38150737 - Exonic hg19 UCS TCGA-N8-A4PN 2 21 5'UTR-CDS Inter-chr q13.2 STE:STE20 p11.4 Seq+ 56154 ChimerSeq STARFusion TCGA_RNA-Seq RPN2-ZBTB46 RPN2 chr20 35858462 + ZBTB46 chr20 62422143 - Exonic hg19 UCS TCGA-N8-A4PN 4 9 CDS-5'UTR Intra-chr q11.23 q13.33 Transcription factor Seq+ 56155 ChimerSeq STARFusion TCGA_RNA-Seq TMEM41A-EPHA2 TMEM41A chr3 185206733 - EPHA2 chr1 16477458 - Exonic hg19 UCS TCGA-N8-A4PN 4 6 3'UTR-CDS Inter-chr q27.2 p36.13 Tumor suppressor gene Seq+ 56156 ChimerSeq STARFusion TCGA_RNA-Seq ITGAL-MCAM ITGAL chr16 30534277 + MCAM chr11 119179690 - Exonic hg19 UCS TCGA-N8-A4PN 3 9 Out-of-frame Inter-chr p11.2 q23.3 56157 ChimerSeq STARFusion TCGA_RNA-Seq FGFR4-ACTG1 FGFR4 chr5 176516941 + ACTG1 chr17 79478652 - Exonic hg19 UCS TCGA-N8-A4PN 2 4 CDS-3'UTR Inter-chr q35.2 TK:FGFR Oncogene q25.3 56158 ChimerSeq STARFusion TCGA_RNA-Seq HBG2-HBE1 HBG2 chr11 5526581 - HBE1 chr11 5291386 - Exonic hg19 UCS TCGA-N8-A4PN 2 4 Out-of-frame Intra-chr p15.4 p15.4 56159 ChimerSeq STARFusion TCGA_RNA-Seq KRBOX1-FAM198A KRBOX1 chr3 42983563 + FAM198A chr3 43095013 + Exonic hg19 UCS TCGA-N8-A4PN 2 1 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 56160 ChimerSeq STARFusion TCGA_RNA-Seq KRBOX1-FAM198A KRBOX1 chr3 42983563 + FAM198A chr3 43095013 + Exonic hg19 UCS TCGA-N8-A4PN 2 1 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 56161 ChimerSeq STARFusion TCGA_RNA-Seq CHD2-HMGB1 CHD2 chr15 93444529 + HMGB1 chr13 31037831 - Exonic hg19 UCS TCGA-N8-A4PN 2 0 CDS-5'UTR Inter-chr q26.1 q12.3 56162 ChimerSeq STARFusion TCGA_RNA-Seq OTUD5-TEX101 OTUD5 chrX 48783123 - TEX101 chr19 43906918 + Exonic hg19 UCS TCGA-N8-A4PN 2 0 CDS-5'UTR Inter-chr p11.23 q13.31 56163 ChimerSeq STARFusion TCGA_RNA-Seq THADA-DNM3OS THADA chr2 43817963 - DNM3OS chr1 172113577 - Exonic hg19 UCS TCGA-N7-A4Y0 2 1 CDS-3'UTR Inter-chr p21 q24.3 56164 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF2-SSR2 ARHGEF2 chr1 155921274 - SSR2 chr1 155979441 - Exonic hg19 UCS TCGA-N6-A4VC 24 211 In-Frame Intra-chr q22 q22 Seq+ 56165 ChimerSeq STARFusion TCGA_RNA-Seq DIXDC1-C11orf1 DIXDC1 chr11 111808283 + C11orf1 chr11 111753860 + Exonic hg19 UCS TCGA-N6-A4VC 15 141 In-Frame Intra-chr q23.1 q23.1 Seq+ 56166 ChimerSeq STARFusion TCGA_RNA-Seq DIXDC1-C11orf1 DIXDC1 chr11 111800634 + C11orf1 chr11 111754495 + Exonic hg19 UCS TCGA-N6-A4VC 4 141 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 56167 ChimerSeq STARFusion TCGA_RNA-Seq DIXDC1-C11orf1 DIXDC1 chr11 111800634 + C11orf1 chr11 111753860 + Exonic hg19 UCS TCGA-N6-A4VC 4 141 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 56168 ChimerSeq STARFusion TCGA_RNA-Seq DIXDC1-C11orf1 DIXDC1 chr11 111808283 + C11orf1 chr11 111754495 + Exonic hg19 UCS TCGA-N6-A4VC 2 141 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 56169 ChimerSeq STARFusion TCGA_RNA-Seq ZNF567-HCST ZNF567 chr19 37185778 + HCST chr19 36394253 + Exonic hg19 UCS TCGA-N6-A4VC 4 8 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.12 Seq+ 56170 ChimerSeq STARFusion TCGA_RNA-Seq B4GALT7-NSD1 B4GALT7 chr5 177027261 + NSD1 chr5 176665238 + Exonic hg19 UCS TCGA-N6-A4VC 2 5 Out-of-frame Intra-chr q35.3 q35.3 Oncogene Seq+ 56171 ChimerSeq STARFusion TCGA_RNA-Seq KCTD13-TMEM170A KCTD13 chr16 29934511 - TMEM170A chr16 75485737 - Exonic hg19 UCS TCGA-QM-A5NM 2 2 Out-of-frame Intra-chr p11.2 q23.1 56172 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK4-IVD EIF2AK4 chr15 40284430 + IVD chr15 40727616 + Exonic hg19 UCS TCGA-N7-A4Y5 6 19 CDS-3'UTR Intra-chr q15.1 q15.1 Seq+ 56173 ChimerSeq STARFusion TCGA_RNA-Seq EIF2AK4-IVD EIF2AK4 chr15 40284430 + IVD chr15 40708277 + Exonic hg19 UCS TCGA-N7-A4Y5 2 19 Out-of-frame Intra-chr q15.1 q15.1 Seq+ 56174 ChimerSeq STARFusion TCGA_RNA-Seq EEF1A1-TPM2 EEF1A1 chr6 74227904 - TPM2 chr9 35689271 - Exonic hg19 UCS TCGA-N7-A4Y5 3 1 Out-of-frame Inter-chr q13 Tumor suppressor gene p13.3 56175 ChimerSeq STARFusion TCGA_RNA-Seq TRA2B-FBXO21 TRA2B chr3 185655613 - FBXO21 chr12 117593753 - Exonic hg19 UCS TCGA-N7-A4Y5 2 4 Out-of-frame Inter-chr q27.2 q24.22 Seq+ 56176 ChimerSeq STARFusion TCGA_RNA-Seq ZNF547-TRAPPC2 ZNF547 chr19 57875071 + TRAPPC2 chrX 13738101 - Exonic hg19 UCS TCGA-N7-A4Y5 2 0 5'UTR-5'UTR Inter-chr q13.43 Transcription factor p22.2 56177 ChimerSeq STARFusion TCGA_RNA-Seq CELF1-FNBP4 CELF1 chr11 47504247 - FNBP4 chr11 47739064 - Exonic hg19 UCS TCGA-N9-A4Q4 49 336 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 56178 ChimerSeq STARFusion TCGA_RNA-Seq ARFGAP3-LSM10 ARFGAP3 chr22 43243520 - LSM10 chr1 36859754 - Exonic hg19 UCS TCGA-N9-A4Q4 5 31 CDS-5'UTR Inter-chr q13.2 p34.3 Seq+ 56179 ChimerSeq STARFusion TCGA_RNA-Seq MCTP2-RIMKLB MCTP2 chr15 94945248 + RIMKLB chr12 8935508 + Exonic hg19 UCS TCGA-N9-A4Q4 3 32 CDS-3'UTR Inter-chr q26.2 p13.31 Seq+ 56180 ChimerSeq STARFusion TCGA_RNA-Seq TGFBR1-SEC61B TGFBR1 chr9 101867584 + SEC61B chr9 101992619 + Exonic hg19 UCS TCGA-N9-A4Q4 5 2 Out-of-frame Intra-chr q22.33 q22.33 56181 ChimerSeq STARFusion TCGA_RNA-Seq BIRC6-TTC27 BIRC6 chr2 32582554 + TTC27 chr2 33042524 + Exonic hg19 UCS TCGA-N9-A4Q4 2 7 In-Frame Intra-chr p22.3 p22.3 Seq+ 56182 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-CD36 PVT1 chr8 128903244 + CD36 chr7 80175507 + Exonic hg19 UCS TCGA-N9-A4Q7 7 31 5'UTR-5'UTR Inter-chr q24.21 q21.11 Seq+ 56183 ChimerSeq STARFusion TCGA_RNA-Seq PPTC7-HVCN1 PPTC7 chr12 110983685 - HVCN1 chr12 111065981 - Exonic hg19 UCS TCGA-N9-A4Q7 3 25 CDS-3'UTR Intra-chr q24.11 q24.11 Seq+ 56184 ChimerSeq STARFusion TCGA_RNA-Seq RAD1-IGH@ RAD1 chr5 34915764 - IGH@ chr14 106330074 - Exonic hg19 UCS TCGA-N9-A4Q7 9 1 Out-of-frame Inter-chr p13.2 32.33 56185 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125699 - CXCL16 chr17 4637313 - Exonic hg19 UCS TCGA-N9-A4Q7 5 9 Out-of-frame Inter-chr q12.2 p13.2 56186 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125718 - CXCL16 chr17 4637332 - Exonic hg19 UCS TCGA-N9-A4Q7 3 9 Out-of-frame Inter-chr q12.2 p13.2 56187 ChimerSeq STARFusion TCGA_RNA-Seq TYK2-SYMPK TYK2 chr19 10467244 - SYMPK chr19 46347458 - Exonic hg19 UCS TCGA-N9-A4Q7 2 12 In-Frame Intra-chr p13.2 TK:JakA q13.32 Seq+ 56188 ChimerSeq STARFusion TCGA_RNA-Seq DPM3-MUC1 DPM3 chr1 155112967 - MUC1 chr1 155158685 - Exonic hg19 UCS TCGA-N9-A4Q7 2 1 5'UTR-CDS Intra-chr q22 q22 Oncogene Seq+ 56189 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-PCAT1 PVT1 chr8 129082518 + PCAT1 chr8 128018800 + Exonic hg19 UCS TCGA-N8-A56S 38 154 5'UTR-5'UTR Intra-chr q24.21 q24.21 Seq+ 56190 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-PCAT1 PVT1 chr8 129082607 + PCAT1 chr8 128018800 + Exonic hg19 UCS TCGA-N8-A56S 17 154 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 56191 ChimerSeq STARFusion TCGA_RNA-Seq LSM12-ITGA2B LSM12 chr17 42141169 - ITGA2B chr17 42449791 - Exonic hg19 UCS TCGA-N8-A56S 38 56 In-Frame Intra-chr q21.31 q21.31 Seq+ 56192 ChimerSeq STARFusion TCGA_RNA-Seq SNX11-SNF8 SNX11 chr17 46185200 + SNF8 chr17 47021337 - Exonic hg19 UCS TCGA-N8-A56S 27 100 5'UTR-CDS Intra-chr q21.32 q21.32 Seq+ 56193 ChimerSeq STARFusion TCGA_RNA-Seq PVT1-PCAT1 PVT1 chr8 129022690 + PCAT1 chr8 128018800 + Exonic hg19 UCS TCGA-N8-A56S 12 154 Out-of-frame Intra-chr q24.21 q24.21 Seq+ 56194 ChimerSeq STARFusion TCGA_RNA-Seq AP1S1-PTOV1 AP1S1 chr7 100797798 + PTOV1 chr19 50357663 + Exonic hg19 UCS TCGA-N8-A56S 38 29 In-Frame Inter-chr q22.1 q13.33 Seq+ 56195 ChimerSeq STARFusion TCGA_RNA-Seq SNX11-SNF8 SNX11 chr17 46184958 + SNF8 chr17 47021337 - Exonic hg19 UCS TCGA-N8-A56S 8 100 5'UTR-CDS Intra-chr q21.32 q21.32 Seq+ 56196 ChimerSeq STARFusion TCGA_RNA-Seq SNX11-SNF8 SNX11 chr17 46188129 + SNF8 chr17 47021337 - Exonic hg19 UCS TCGA-N8-A56S 3 100 5'UTR-CDS Intra-chr q21.32 q21.32 Seq+ 56197 ChimerSeq STARFusion TCGA_RNA-Seq NFX1-DNAJA1 NFX1 chr9 33290595 + DNAJA1 chr9 33029883 + Exonic hg19 UCS TCGA-N8-A56S 14 48 In-Frame Intra-chr p13.3 Transcription factor p21.1 Seq+ 56198 ChimerSeq STARFusion TCGA_RNA-Seq NUP188-TBC1D13 NUP188 chr9 131721413 + TBC1D13 chr9 131565529 + Exonic hg19 UCS TCGA-N8-A56S 14 34 In-Frame Intra-chr q34.11 q34.11 Seq+ 56199 ChimerSeq STARFusion TCGA_RNA-Seq DNAJC4-RARRES3 DNAJC4 chr11 63998412 + RARRES3 chr11 63306988 + Exonic hg19 UCS TCGA-N8-A56S 12 41 Out-of-frame Intra-chr q13.1 q12.3 Tumor suppressor gene Seq+ 56200 ChimerSeq STARFusion TCGA_RNA-Seq KANSL1-SPOP KANSL1 chr17 44301037 - SPOP chr17 47700238 - Exonic hg19 UCS TCGA-N8-A56S 4 73 5'UTR-5'UTR Intra-chr q21.33 Oncogene Tumor suppressor gene Seq+ 56201 ChimerSeq STARFusion TCGA_RNA-Seq BPTF-NOL11 BPTF chr17 65862803 + NOL11 chr17 65739859 + Exonic hg19 UCS TCGA-N8-A56S 7 42 Out-of-frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 56202 ChimerSeq STARFusion TCGA_RNA-Seq KIF3B-TM9SF4 KIF3B chr20 30865568 + TM9SF4 chr20 30753098 + Exonic hg19 UCS TCGA-N8-A56S 17 2 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 56203 ChimerSeq STARFusion TCGA_RNA-Seq ASB1-RBM44 ASB1 chr2 239342336 + RBM44 chr2 238742640 + Exonic hg19 UCS TCGA-N8-A56S 5 40 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 56204 ChimerSeq STARFusion TCGA_RNA-Seq DSTYK-CSRP1 DSTYK chr1 205180399 - CSRP1 chr1 201454504 - Exonic hg19 UCS TCGA-N8-A56S 7 29 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 56205 ChimerSeq STARFusion TCGA_RNA-Seq ARRB1-GDPD5 ARRB1 chr11 74998359 - GDPD5 chr11 75173934 - Exonic hg19 UCS TCGA-N8-A56S 4 37 Out-of-frame Intra-chr q13.4 q13.5 Seq+ 56206 ChimerSeq STARFusion TCGA_RNA-Seq LRP6-DUSP16 LRP6 chr12 12397196 - DUSP16 chr12 12674397 - Exonic hg19 UCS TCGA-N8-A56S 7 20 CDS-5'UTR Intra-chr Seq+ 56207 ChimerSeq STARFusion TCGA_RNA-Seq ACOT7-DNAJC11 ACOT7 chr1 6341162 - DNAJC11 chr1 6727870 - Exonic hg19 UCS TCGA-N8-A56S 5 27 In-Frame Intra-chr p36.31 p36.31 Tumor suppressor gene Seq+ 56208 ChimerSeq STARFusion TCGA_RNA-Seq LUC7L3-CEP250 LUC7L3 chr17 48824063 + CEP250 chr20 34078463 + Exonic hg19 UCS TCGA-N8-A56S 5 24 Out-of-frame Inter-chr q21.33 q11.22 Seq+ 56209 ChimerSeq STARFusion TCGA_RNA-Seq SLC39A11-CA11 SLC39A11 chr17 71080947 - CA11 chr19 49143537 - Exonic hg19 UCS TCGA-N8-A56S 6 20 In-Frame Inter-chr q25.1 q13.33 Tumor suppressor gene Seq+ 56210 ChimerSeq STARFusion TCGA_RNA-Seq PHLDB2-CD96 PHLDB2 chr3 111451550 + CD96 chr3 111342601 + Exonic hg19 UCS TCGA-N8-A56S 4 16 5'UTR-CDS Intra-chr q13.2 q13.13 Seq+ 56211 ChimerSeq STARFusion TCGA_RNA-Seq PLCXD2-CD96 PLCXD2 chr3 111451550 + CD96 chr3 111342601 + Exonic hg19 UCS TCGA-N8-A56S 4 16 3'UTR-CDS Intra-chr q13.2 q13.13 Seq+ 56212 ChimerSeq STARFusion TCGA_RNA-Seq ABCC4-UGGT2 ABCC4 chr13 95953495 - UGGT2 chr13 96489456 - Exonic hg19 UCS TCGA-N8-A56S 3 18 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 56213 ChimerSeq STARFusion TCGA_RNA-Seq RMI2-CLEC16A RMI2 chr16 11439623 + CLEC16A chr16 11214472 + Exonic hg19 UCS TCGA-N8-A56S 3 18 In-Frame Intra-chr p13.13 p13.13 Seq+ 56214 ChimerSeq STARFusion TCGA_RNA-Seq SCRN2-GIP SCRN2 chr17 45915636 - GIP chr17 47041842 - Exonic hg19 UCS TCGA-N8-A56S 2 22 Out-of-frame Intra-chr q21.32 q21.32 Seq+ 56215 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC7-ACAD11 ZDHHC7 chr16 85044892 - ACAD11 chr3 132350323 - Exonic hg19 UCS TCGA-N8-A56S 5 8 5'UTR-CDS Inter-chr q24.1 q22.1 Seq+ 56216 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC7-NPHP3 ZDHHC7 chr16 85044892 - NPHP3 chr3 132350323 - Exonic hg19 UCS TCGA-N8-A56S 5 8 5'UTR-3'UTR Inter-chr q24.1 q22.1 56217 ChimerSeq STARFusion TCGA_RNA-Seq RMI2-CLEC16A RMI2 chr16 11343635 + CLEC16A chr16 11214472 + Exonic hg19 UCS TCGA-N8-A56S 2 18 5'UTR-CDS Intra-chr p13.13 p13.13 Seq+ 56218 ChimerSeq STARFusion TCGA_RNA-Seq KIF24-ZCCHC7 KIF24 chr9 34286615 - ZCCHC7 chr9 37327796 + Exonic hg19 UCS TCGA-N8-A56S 3 12 In-Frame Intra-chr p13.3 p13.2 Seq+ 56219 ChimerSeq STARFusion TCGA_RNA-Seq CLCN4-SHROOM2 CLCN4 chrX 10155654 + SHROOM2 chrX 9841692 + Exonic hg19 UCS TCGA-N8-A56S 3 11 Out-of-frame Intra-chr p22.2 p22.2 Seq+ 56220 ChimerSeq STARFusion TCGA_RNA-Seq ELK3-PGAM1P5 ELK3 chr12 96617551 + PGAM1P5 chr12 96043104 + Exonic hg19 UCS TCGA-N8-A56S 3 11 Out-of-frame Intra-chr q23.1 Transcription factor q22 Seq+ 56221 ChimerSeq STARFusion TCGA_RNA-Seq CDC6-LRRC59 CDC6 chr17 38450308 + LRRC59 chr17 48465493 - Exonic hg19 UCS TCGA-N8-A56S 3 10 3'UTR-CDS Intra-chr q21.2 q21.33 Seq+ 56222 ChimerSeq STARFusion TCGA_RNA-Seq ZHX2-PPM1B ZHX2 chr8 123794185 + PPM1B chr2 44428325 + Exonic hg19 UCS TCGA-N8-A56S 3 9 5'UTR-5'UTR Inter-chr q24.13 Tumor suppressor gene Transcription factor p21 Seq+ 56223 ChimerSeq STARFusion TCGA_RNA-Seq ACTN4-SPINT2 ACTN4 chr19 39208714 + SPINT2 chr19 38774267 + Exonic hg19 UCS TCGA-N8-A56S 3 8 In-Frame Intra-chr q13.2 Tumor suppressor gene Seq+ 56224 ChimerSeq STARFusion TCGA_RNA-Seq EMID1-KREMEN1 EMID1 chr22 29611619 + KREMEN1 chr22 29490246 + Exonic hg19 UCS TCGA-N8-A56S 3 7 In-Frame Intra-chr q12.2 q12.1 Seq+ 56225 ChimerSeq STARFusion TCGA_RNA-Seq PRRC2B-NUP214 PRRC2B chr9 134334743 + NUP214 chr9 134090599 + Exonic hg19 UCS TCGA-N8-A56S 3 7 In-Frame Intra-chr q34.13 q34.13 Oncogene Seq+ 56226 ChimerSeq STARFusion TCGA_RNA-Seq SENP2-MAP3K13 SENP2 chr3 185344181 + MAP3K13 chr3 185181338 + Exonic hg19 UCS TCGA-N8-A56S 3 7 In-Frame Intra-chr q27.2 q27.2 Seq+ 56227 ChimerSeq STARFusion TCGA_RNA-Seq ASB1-RAMP1 ASB1 chr2 239342336 + RAMP1 chr2 238820170 + Exonic hg19 UCS TCGA-N8-A56S 2 10 In-Frame Intra-chr q37.3 q37.3 Seq+ 56228 ChimerSeq STARFusion TCGA_RNA-Seq ATP6V0A4-TM4SF20 ATP6V0A4 chr7 138406642 - TM4SF20 chr2 228235696 - Exonic hg19 UCS TCGA-N8-A56S 3 3 In-Frame Inter-chr q34 q36.3 Seq+ 56229 ChimerSeq STARFusion TCGA_RNA-Seq DSCR4-KCNJ6 DSCR4 chr21 39492401 - KCNJ6 chr21 39213011 - Exonic hg19 UCS TCGA-N8-A56S 2 1 CDS-5'UTR Intra-chr q22.13 q22.13 56230 ChimerSeq STARFusion TCGA_RNA-Seq MYO1D-MUC13 MYO1D chr17 31011193 - MUC13 chr3 124630988 - Exonic hg19 UCS TCGA-N8-A56S 2 0 Out-of-frame Inter-chr q11.2 q21.2 56231 ChimerSeq STARFusion TCGA_RNA-Seq BRE-GPN1 BRE chr2 28117551 + GPN1 chr2 27870703 + Exonic hg19 UCS TCGA-N9-A4Q1 4 31 Out-of-frame Intra-chr p23.3 Seq+ 56232 ChimerSeq STARFusion TCGA_RNA-Seq MRPL33-GPN1 MRPL33 chr2 28117551 + GPN1 chr2 27870703 + Exonic hg19 UCS TCGA-N9-A4Q1 4 26 3'UTR-CDS Intra-chr p23.2 p23.3 56233 ChimerSeq STARFusion TCGA_RNA-Seq VTI1A-HDAC1 VTI1A chr10 114298089 + HDAC1 chr1 32790080 + Exonic hg19 UCS TCGA-N9-A4Q1 7 14 In-Frame Inter-chr q25.2 p35.2 Tumor suppressor gene Seq+ 56234 ChimerSeq STARFusion TCGA_RNA-Seq AIP-PRSS53 AIP chr11 67251325 + PRSS53 chr16 31095129 - Exonic hg19 UCS TCGA-N9-A4Q1 6 9 Out-of-frame Inter-chr q13.2 Tumor suppressor gene p11.2 Seq+ 56235 ChimerSeq STARFusion TCGA_RNA-Seq KDM4B-UVRAG KDM4B chr19 5016350 + UVRAG chr11 75851755 + Exonic hg19 UCS TCGA-N9-A4Q1 3 10 5'UTR-CDS Inter-chr p13.3 q13.5 Tumor suppressor gene Seq+ 56236 ChimerSeq STARFusion TCGA_RNA-Seq GAS5-ACTG1 GAS5 chr1 173834995 - ACTG1 chr17 79478652 - Exonic hg19 UCS TCGA-N9-A4Q1 2 3 3'UTR-3'UTR Inter-chr q25.1 Tumor suppressor gene q25.3 56237 ChimerSeq STARFusion TCGA_RNA-Seq RAB7A-GATS RAB7A chr3 128516912 + GATS chr7 99831297 - Exonic hg19 UCS TCGA-N9-A4Q1 2 2 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q22.1 Seq+ 56238 ChimerSeq STARFusion TCGA_RNA-Seq RAB7A-GATS RAB7A chr3 128516912 + GATS chr7 99831297 - Exonic hg19 UCS TCGA-N9-A4Q1 2 2 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q22.1 Seq+ 56239 ChimerSeq STARFusion TCGA_RNA-Seq OLFM2-CRTC1 OLFM2 chr19 10046980 - CRTC1 chr19 18853720 + Exonic hg19 UCS TCGA-N9-A4Q3 4 11 In-Frame Intra-chr p13.2 p13.11 Oncogene Seq+ 56240 ChimerSeq STARFusion TCGA_RNA-Seq LSM4-RCC1 LSM4 chr19 18433828 - RCC1 chr1 28856370 + Exonic hg19 UCS TCGA-N9-A4Q3 2 5 CDS-5'UTR Inter-chr p13.11 p35.3 Seq+ 56241 ChimerSeq STARFusion TCGA_RNA-Seq RAP1GAP-USP48 RAP1GAP chr1 21976254 - USP48 chr1 22021714 - Exonic hg19 UCS TCGA-N9-A4Q3 2 4 Out-of-frame Intra-chr p36.12 Tumor suppressor gene p36.12 Seq+ 56242 ChimerSeq STARFusion TCGA_RNA-Seq NBAS-PQLC3 NBAS chr2 15326866 - PQLC3 chr2 11300592 + Exonic hg19 UCS TCGA-N9-A4Q3 2 3 Out-of-frame Intra-chr p24.3 p25.1 Seq+ 56243 ChimerSeq STARFusion TCGA_RNA-Seq KMT2E-LHFPL3 KMT2E chr7 104730720 + LHFPL3 chr7 104377122 + Exonic hg19 UCS TCGA-NA-A4R1 14 409 Out-of-frame Intra-chr q22.3 q22.2 56244 ChimerSeq STARFusion TCGA_RNA-Seq KMT2E-LHFPL3 KMT2E chr7 104730720 + LHFPL3 chr7 104366802 + Exonic hg19 UCS TCGA-NA-A4R1 3 409 Out-of-frame Intra-chr q22.3 q22.2 56245 ChimerSeq STARFusion TCGA_RNA-Seq KMT2E-LHFPL3 KMT2E chr7 104722244 + LHFPL3 chr7 104377122 + Exonic hg19 UCS TCGA-NA-A4R1 2 409 Out-of-frame Intra-chr q22.3 q22.2 56246 ChimerSeq STARFusion TCGA_RNA-Seq SPTAN1-SGTA SPTAN1 chr9 131314975 + SGTA chr19 2761520 - Exonic hg19 UCS TCGA-NA-A4R1 25 174 5'UTR-CDS Inter-chr q34.11 p13.3 Seq+ 56247 ChimerSeq STARFusion TCGA_RNA-Seq NXF1-STX5 NXF1 chr11 62563932 - STX5 chr11 62575100 - Exonic hg19 UCS TCGA-NA-A4R1 26 131 In-Frame Intra-chr q12.3 q12.3 Seq+ 56248 ChimerSeq STARFusion TCGA_RNA-Seq WASF2-FGR WASF2 chr1 27816497 - FGR chr1 27951662 - Exonic hg19 UCS TCGA-NA-A4R1 16 149 5'UTR-5'UTR Intra-chr p36.11 p35.3 TK:Src Seq+ 56249 ChimerSeq STARFusion TCGA_RNA-Seq ARHGEF11-ETV3L ARHGEF11 chr1 157014091 - ETV3L chr1 157069348 - Exonic hg19 UCS TCGA-NA-A4R1 27 104 CDS-5'UTR Intra-chr q23.1 q23.1 Transcription factor Seq+ 56250 ChimerSeq STARFusion TCGA_RNA-Seq EIF4G3-ECE1 EIF4G3 chr1 21377359 - ECE1 chr1 21616649 - Exonic hg19 UCS TCGA-NA-A4R1 23 78 5'UTR-CDS Intra-chr p36.12 p36.12 Seq+ 56251 ChimerSeq STARFusion TCGA_RNA-Seq NXF1-STX5 NXF1 chr11 62563759 - STX5 chr11 62575100 - Exonic hg19 UCS TCGA-NA-A4R1 4 131 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 56252 ChimerSeq STARFusion TCGA_RNA-Seq BMPR2-NOP58 BMPR2 chr2 203242273 + NOP58 chr2 203139836 + Exonic hg19 UCS TCGA-NA-A4R1 14 88 3'UTR-CDS Intra-chr q33.1 TKL:STKR Tumor suppressor gene q33.1 Seq+ 56253 ChimerSeq STARFusion TCGA_RNA-Seq BTBD2-GTSE1 BTBD2 chr19 1987165 - GTSE1 chr22 46719087 + Exonic hg19 UCS TCGA-NA-A4R1 16 73 Out-of-frame Inter-chr p13.3 q13.31 Seq+ 56254 ChimerSeq STARFusion TCGA_RNA-Seq PPP1R37-APOC4 PPP1R37 chr19 45596785 + APOC4 chr19 45448006 + Exonic hg19 UCS TCGA-NA-A4R1 15 73 In-Frame Intra-chr q13.32 q13.32 56255 ChimerSeq STARFusion TCGA_RNA-Seq INADL-NFIA INADL chr1 62232145 + NFIA chr1 61920975 + Exonic hg19 UCS TCGA-NA-A4R1 8 69 In-Frame Intra-chr p31.3 Transcription factor Seq+ 56256 ChimerSeq STARFusion TCGA_RNA-Seq RAPGEF1-MED27 RAPGEF1 chr9 134471685 - MED27 chr9 134759486 - Exonic hg19 UCS TCGA-NA-A4R1 5 80 Out-of-frame Intra-chr q34.13 q34.13 Seq+ 56257 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D22A-AP3D1 TBC1D22A chr22 47433094 + AP3D1 chr19 2102267 - Exonic hg19 UCS TCGA-NA-A4R1 4 51 In-Frame Inter-chr q13.31 p13.3 Seq+ 56258 ChimerSeq STARFusion TCGA_RNA-Seq CRTC3-MESP2 CRTC3 chr15 91182047 + MESP2 chr15 90321296 + Exonic hg19 UCS TCGA-NA-A4R1 2 37 In-Frame Intra-chr q26.1 q26.1 Transcription factor Seq+ 56259 ChimerSeq STARFusion TCGA_RNA-Seq PHF21A-ARHGAP1 PHF21A chr11 46142486 - ARHGAP1 chr11 46717706 - Exonic hg19 UCS TCGA-NA-A4R1 6 19 5'UTR-5'UTR Intra-chr p11.2 Transcription factor p11.2 Seq+ 56260 ChimerSeq STARFusion TCGA_RNA-Seq KIAA1549-C7orf66 KIAA1549 chr7 138545885 - C7orf66 chr7 108524641 - Exonic hg19 UCS TCGA-NA-A4R1 5 21 CDS-5'UTR Intra-chr q34 q31.1 Seq+ 56261 ChimerSeq STARFusion TCGA_RNA-Seq FAM65A-ZP3 FAM65A chr16 67578054 + ZP3 chr7 76062301 + Exonic hg19 UCS TCGA-NA-A4R1 3 26 Out-of-frame Inter-chr q11.23 Seq+ 56262 ChimerSeq STARFusion TCGA_RNA-Seq MTHFD1L-AKAP12 MTHFD1L chr6 151336829 + AKAP12 chr6 151626882 + Exonic hg19 UCS TCGA-NA-A4R1 5 16 In-Frame Intra-chr q25.1 q25.1 Tumor suppressor gene 56263 ChimerSeq STARFusion TCGA_RNA-Seq ZNF813-FPR3 ZNF813 chr19 53971043 + FPR3 chr19 52326992 + Exonic hg19 UCS TCGA-NA-A4R1 5 4 5'UTR-5'UTR Intra-chr q13.42 Transcription factor q13.41 Seq+ 56264 ChimerSeq STARFusion TCGA_RNA-Seq KIF1B-HAGH KIF1B chr1 10428596 + HAGH chr16 1873038 - Exonic hg19 UCS TCGA-NA-A4R1 2 12 Out-of-frame Inter-chr p36.22 Tumor suppressor gene p13.3 Seq+ 56265 ChimerSeq STARFusion TCGA_RNA-Seq CUX2-IFT81 CUX2 chr12 111472044 + IFT81 chr12 110565165 + Exonic hg19 UCS TCGA-NA-A4R1 3 6 CDS-5'UTR Intra-chr q24.11 Transcription factor q24.11 Seq+ 56266 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-SPINK8 MAP4 chr3 48019355 - SPINK8 chr3 48351436 - Exonic hg19 UCS TCGA-NA-A4R1 2 6 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 56267 ChimerSeq STARFusion TCGA_RNA-Seq ZDHHC1-KCTD19 ZDHHC1 chr16 67450074 - KCTD19 chr16 67337240 - Exonic hg19 UCS TCGA-NA-A4R1 2 5 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 56268 ChimerSeq STARFusion TCGA_RNA-Seq NUP93-THADA NUP93 chr16 56792567 + THADA chr2 43460021 - Exonic hg19 UCS TCGA-NA-A4QV 12 119 Out-of-frame Inter-chr q13 p21 Seq+ 56269 ChimerSeq STARFusion TCGA_RNA-Seq HERPUD1-THADA HERPUD1 chr16 56970729 + THADA chr2 43657441 - Exonic hg19 UCS TCGA-NA-A4QV 10 105 In-Frame Inter-chr q13 p21 Seq+ 56270 ChimerSeq STARFusion TCGA_RNA-Seq CCDC157-EWSR1 CCDC157 chr22 30753121 + EWSR1 chr22 29688126 + Exonic hg19 UCS TCGA-NA-A4QV 13 82 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 56271 ChimerSeq STARFusion TCGA_RNA-Seq ZMIZ1-ADK ZMIZ1 chr10 80829027 + ADK chr10 76468079 + Exonic hg19 UCS TCGA-NA-A4QV 24 38 5'UTR-CDS Intra-chr q22.3 q22.2 Seq+ 56272 ChimerSeq STARFusion TCGA_RNA-Seq NUP93-THADA NUP93 chr16 56816126 + THADA chr2 43460021 - Exonic hg19 UCS TCGA-NA-A4QV 2 119 5'UTR-CDS Inter-chr q13 p21 Seq+ 56273 ChimerSeq STARFusion TCGA_RNA-Seq TPRN-CTDNEP1 TPRN chr9 140093439 - CTDNEP1 chr17 7147954 - Exonic hg19 UCS TCGA-NA-A4QV 6 99 Out-of-frame Inter-chr q34.3 p13.1 Seq+ 56274 ChimerSeq STARFusion TCGA_RNA-Seq CCDC157-EWSR1 CCDC157 chr22 30753121 + EWSR1 chr22 29687554 + Exonic hg19 UCS TCGA-NA-A4QV 9 82 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 56275 ChimerSeq STARFusion TCGA_RNA-Seq HERPUD1-THADA HERPUD1 chr16 56970729 + THADA chr2 43625278 - Exonic hg19 UCS TCGA-NA-A4QV 2 105 In-Frame Inter-chr q13 p21 Seq+ 56276 ChimerSeq STARFusion TCGA_RNA-Seq ZZZ3-USP33 ZZZ3 chr1 78148947 - USP33 chr1 78167156 - Exonic hg19 UCS TCGA-NA-A4QV 7 72 5'UTR-CDS Intra-chr p31.1 Transcription factor p31.1 Tumor suppressor gene Seq+ 56277 ChimerSeq STARFusion TCGA_RNA-Seq CELSR2-KIAA1324 CELSR2 chr1 109796011 + KIAA1324 chr1 109707121 + Exonic hg19 UCS TCGA-NA-A4QV 15 31 In-Frame Intra-chr p13.3 p13.3 Seq+ 56278 ChimerSeq STARFusion TCGA_RNA-Seq ZZZ3-USP33 ZZZ3 chr1 78148270 - USP33 chr1 78167156 - Exonic hg19 UCS TCGA-NA-A4QV 3 72 5'UTR-CDS Intra-chr p31.1 Transcription factor p31.1 Tumor suppressor gene Seq+ 56279 ChimerSeq STARFusion TCGA_RNA-Seq FBXL3-ZNF76 FBXL3 chr13 77589544 - ZNF76 chr6 35259055 + Exonic hg19 UCS TCGA-NA-A4QV 6 43 In-Frame Inter-chr q22.3 p21.31 Transcription factor Seq+ 56280 ChimerSeq STARFusion TCGA_RNA-Seq DIP2C-RTKN2 DIP2C chr10 334304 - RTKN2 chr10 63959620 - Exonic hg19 UCS TCGA-NA-A4QV 5 21 Out-of-frame Intra-chr p15.3 q21.2 Seq+ 56281 ChimerSeq STARFusion TCGA_RNA-Seq COL27A1-C9orf43 COL27A1 chr9 117053197 + C9orf43 chr9 116181388 + Exonic hg19 UCS TCGA-NA-A4QV 5 10 Out-of-frame Intra-chr q32 q32 Seq+ 56282 ChimerSeq STARFusion TCGA_RNA-Seq HSPA14-LINC00595 HSPA14 chr10 14896279 + LINC00595 chr10 80089850 + Exonic hg19 UCS TCGA-NA-A4QV 4 12 Out-of-frame Intra-chr p13 56283 ChimerSeq STARFusion TCGA_RNA-Seq PIGF-CALM2 PIGF chr2 46839367 - CALM2 chr2 47399598 - Exonic hg19 UCS TCGA-NA-A4QV 3 15 Out-of-frame Intra-chr p21 p21 Seq+ 56284 ChimerSeq STARFusion TCGA_RNA-Seq SARNP-MMP19 SARNP chr12 56211450 - MMP19 chr12 56236222 - Exonic hg19 UCS TCGA-NA-A4QV 5 6 In-Frame Intra-chr q13.2 q13.2 Seq+ 56285 ChimerSeq STARFusion TCGA_RNA-Seq DSCR4-KCNJ6 DSCR4 chr21 39492401 - KCNJ6 chr21 39213011 - Exonic hg19 UCS TCGA-NA-A4QV 2 15 CDS-5'UTR Intra-chr q22.13 q22.13 56286 ChimerSeq STARFusion TCGA_RNA-Seq HSPA14-LINC00595 HSPA14 chr10 14891810 + LINC00595 chr10 80089850 + Exonic hg19 UCS TCGA-NA-A4QV 2 12 Out-of-frame Intra-chr p13 56287 ChimerSeq STARFusion TCGA_RNA-Seq MAPK10-PTPN13 MAPK10 chr4 87275683 - PTPN13 chr4 87679413 + Exonic hg19 UCS TCGA-NA-A4QV 3 7 5'UTR-CDS Intra-chr q21.3 Tumor suppressor gene q21.3 Tumor suppressor gene Seq+ 56288 ChimerSeq STARFusion TCGA_RNA-Seq NOSIP-ECHS1 NOSIP chr19 50080016 - ECHS1 chr10 135176437 - Exonic hg19 UCS TCGA-NA-A4QV 2 0 5'UTR-CDS Inter-chr q13.33 q26.3 56289 ChimerSeq STARFusion TCGA_RNA-Seq CNOT8-PROL1 CNOT8 chr5 154244945 + PROL1 chr4 71275097 + Exonic hg19 UCS TCGA-NA-A4QW 23 116 Out-of-frame Inter-chr q33.2 Seq+ 56290 ChimerSeq STARFusion TCGA_RNA-Seq ATXN7-SLC25A26 ATXN7 chr3 63938159 + SLC25A26 chr3 66293627 + Exonic hg19 UCS TCGA-NA-A4QW 11 110 In-Frame Intra-chr p14.1 Seq+ 56291 ChimerSeq STARFusion TCGA_RNA-Seq ZFPM2-OXR1 ZFPM2 chr8 106456609 + OXR1 chr8 107371704 + Exonic hg19 UCS TCGA-NA-A4QW 4 23 CDS-5'UTR Intra-chr q22.3 Transcription factor q23.1 Seq+ 56292 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-RSBN1L PTPN12 chr7 77166962 + RSBN1L chr7 77378741 + Exonic hg19 UCS TCGA-NA-A4QW 3 21 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 56293 ChimerSeq STARFusion TCGA_RNA-Seq PTPN12-RSBN1L PTPN12 chr7 77166962 + RSBN1L chr7 77394812 + Exonic hg19 UCS TCGA-NA-A4QW 3 21 In-Frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 56294 ChimerSeq STARFusion TCGA_RNA-Seq DSCR4-KCNJ6 DSCR4 chr21 39492401 - KCNJ6 chr21 39213011 - Exonic hg19 UCS TCGA-NA-A4QW 3 9 CDS-5'UTR Intra-chr q22.13 q22.13 56295 ChimerSeq STARFusion TCGA_RNA-Seq ZFP3-ARRB2 ZFP3 chr17 4981870 + ARRB2 chr17 4620512 + Exonic hg19 UCS TCGA-N9-A4Q8 17 119 5'UTR-5'UTR Intra-chr p13.2 Transcription factor p13.2 Seq+ 56296 ChimerSeq STARFusion TCGA_RNA-Seq RBFOX2-MYH9 RBFOX2 chr22 36205827 - MYH9 chr22 36685343 - Exonic hg19 UCS TCGA-N9-A4Q8 20 64 In-Frame Intra-chr q12.3 Oncogene Tumor suppressor gene Seq+ 56297 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-RAB37 SEPT9 chr17 75398667 + RAB37 chr17 72667222 + Exonic hg19 UCS TCGA-N9-A4Q8 6 44 Out-of-frame Intra-chr q25.1 Seq+ 56298 ChimerSeq STARFusion TCGA_RNA-Seq MECOM-NCEH1 MECOM chr3 169381124 - NCEH1 chr3 172363482 - Exonic hg19 UCS TCGA-N9-A4Q8 3 26 In-Frame Intra-chr q26.2 Transcription factor q26.31 Seq+ 56299 ChimerSeq STARFusion TCGA_RNA-Seq MECOM-NCEH1 MECOM chr3 169381124 - NCEH1 chr3 172365904 - Exonic hg19 UCS TCGA-N9-A4Q8 2 26 Out-of-frame Intra-chr q26.2 Transcription factor q26.31 Seq+ 56300 ChimerSeq STARFusion TCGA_RNA-Seq PIK3R3-LRRC41 PIK3R3 chr1 46543187 - LRRC41 chr1 46752171 - Exonic hg19 UCS TCGA-N9-A4Q8 2 21 Out-of-frame Intra-chr p34.1 p33 Seq+ 56301 ChimerSeq STARFusion TCGA_RNA-Seq SERTAD2-BCL2L11 SERTAD2 chr2 64977415 - BCL2L11 chr2 111921710 + Exonic hg19 UCS TCGA-N9-A4Q8 2 10 5'UTR-CDS Intra-chr p14 q13 Tumor suppressor gene Seq+ 56302 ChimerSeq STARFusion TCGA_RNA-Seq SIX1-C14orf39 SIX1 chr14 61115348 - C14orf39 chr14 60951804 - Exonic hg19 UCS TCGA-N9-A4Q8 2 2 CDS-5'UTR Intra-chr q23.1 Transcription factor q23.1 56303 ChimerSeq STARFusion TCGA_RNA-Seq SNX8-CHST12 SNX8 chr7 2302865 - CHST12 chr7 2472198 + Exonic hg19 UCS TCGA-N9-A4Q8 2 1 CDS-5'UTR Intra-chr p22.3 p22.3 Seq+ 56304 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-C1D SBNO2 chr19 1147308 - C1D chr2 68274451 - Exonic hg19 UCS TCGA-N7-A59B 5 11 CDS-5'UTR Inter-chr p13.3 p14 Seq+ 56305 ChimerSeq STARFusion TCGA_RNA-Seq AP5B1-CFL1 AP5B1 chr11 65547913 - CFL1 chr11 65623713 - Exonic hg19 UCS TCGA-N7-A59B 4 11 In-Frame Intra-chr q13.1 q13.1 Seq+ 56306 ChimerSeq STARFusion TCGA_RNA-Seq PPT1-HIVEP3 PPT1 chr1 40555082 - HIVEP3 chr1 42166666 - Exonic hg19 UCS TCGA-N7-A59B 3 10 CDS-5'UTR Intra-chr p34.2 p34.2 Tumor suppressor gene Transcription factor Seq+ 56307 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-C1D SBNO2 chr19 1147308 - C1D chr2 68280269 - Exonic hg19 UCS TCGA-N7-A59B 2 11 CDS-5'UTR Inter-chr p13.3 p14 Seq+ 56308 ChimerSeq STARFusion TCGA_RNA-Seq CDC42-LDLRAD2 CDC42 chr1 22379235 + LDLRAD2 chr1 22138843 + Exonic hg19 UCS TCGA-N7-A59B 3 1 5'UTR-5'UTR Intra-chr p36.12 p36.12 56309 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-C1D SBNO2 chr19 1147308 - C1D chr2 68274451 - Exonic hg19 UCS TCGA-N8-A4PO 5 11 CDS-5'UTR Inter-chr p13.3 p14 Seq+ 56310 ChimerSeq STARFusion TCGA_RNA-Seq AP5B1-CFL1 AP5B1 chr11 65547913 - CFL1 chr11 65623713 - Exonic hg19 UCS TCGA-N8-A4PO 4 11 In-Frame Intra-chr q13.1 q13.1 Seq+ 56311 ChimerSeq STARFusion TCGA_RNA-Seq PPT1-HIVEP3 PPT1 chr1 40555082 - HIVEP3 chr1 42166666 - Exonic hg19 UCS TCGA-N8-A4PO 3 10 CDS-5'UTR Intra-chr p34.2 p34.2 Tumor suppressor gene Transcription factor Seq+ 56312 ChimerSeq STARFusion TCGA_RNA-Seq SBNO2-C1D SBNO2 chr19 1147308 - C1D chr2 68280269 - Exonic hg19 UCS TCGA-N8-A4PO 2 11 CDS-5'UTR Inter-chr p13.3 p14 Seq+ 56313 ChimerSeq STARFusion TCGA_RNA-Seq CDC42-LDLRAD2 CDC42 chr1 22379235 + LDLRAD2 chr1 22138843 + Exonic hg19 UCS TCGA-N8-A4PO 3 1 5'UTR-5'UTR Intra-chr p36.12 p36.12 56314 ChimerSeq STARFusion TCGA_RNA-Seq CHTOP-S100A1 CHTOP chr1 153606819 + S100A1 chr1 153600903 + Exonic hg19 UCS TCGA-N8-A4PP 97 839 5'UTR-5'UTR Intra-chr q21.3 q21.3 Seq+ 56315 ChimerSeq STARFusion TCGA_RNA-Seq CHTOP-S100A1 CHTOP chr1 153606819 + S100A1 chr1 153602985 + Exonic hg19 UCS TCGA-N8-A4PP 40 839 5'UTR-5'UTR Intra-chr q21.3 q21.3 Seq+ 56316 ChimerSeq STARFusion TCGA_RNA-Seq PTGES3-NACA PTGES3 chr12 57081782 - NACA chr12 57108471 - Exonic hg19 UCS TCGA-N8-A4PP 60 443 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 56317 ChimerSeq STARFusion TCGA_RNA-Seq RAD21-EIF3H RAD21 chr8 117864187 - EIF3H chr8 117738411 - Exonic hg19 UCS TCGA-N8-A4PP 70 352 In-Frame Intra-chr q24.11 q24.11 Seq+ 56318 ChimerSeq STARFusion TCGA_RNA-Seq PPIG-SSB PPIG chr2 170460771 + SSB chr2 170649083 + Exonic hg19 UCS TCGA-N8-A4PP 42 208 CDS-5'UTR Intra-chr q31.1 q31.1 Seq+ 56319 ChimerSeq STARFusion TCGA_RNA-Seq PPIG-SSB PPIG chr2 170460771 + SSB chr2 170650161 + Exonic hg19 UCS TCGA-N8-A4PP 11 208 CDS-5'UTR Intra-chr q31.1 q31.1 Seq+ 56320 ChimerSeq STARFusion TCGA_RNA-Seq MGAT4A-KIAA1211L MGAT4A chr2 99279509 - KIAA1211L chr2 99411137 - Exonic hg19 UCS TCGA-N8-A4PP 18 127 Out-of-frame Intra-chr q11.2 q11.2 56321 ChimerSeq STARFusion TCGA_RNA-Seq MGAT4A-KIAA1211L MGAT4A chr2 99279509 - KIAA1211L chr2 99411134 - Exonic hg19 UCS TCGA-N8-A4PP 12 127 Out-of-frame Intra-chr q11.2 q11.2 56322 ChimerSeq STARFusion TCGA_RNA-Seq DPY19L3-TDRD12 DPY19L3 chr19 32902278 + TDRD12 chr19 33222631 + Exonic hg19 UCS TCGA-N8-A4PP 7 95 In-Frame Intra-chr q13.11 q13.11 Seq+ 56323 ChimerSeq STARFusion TCGA_RNA-Seq RAB5B-DGKA RAB5B chr12 56367923 + DGKA chr12 56330207 + Exonic hg19 UCS TCGA-N8-A4PP 23 14 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 56324 ChimerSeq STARFusion TCGA_RNA-Seq JAGN1-CPNE9 JAGN1 chr3 9935073 + CPNE9 chr3 9771054 + Exonic hg19 UCS TCGA-N8-A4PP 10 54 Out-of-frame Intra-chr p25.3 p25.3 Seq+ 56325 ChimerSeq STARFusion TCGA_RNA-Seq ZNF546-HNRNPD ZNF546 chr19 40514472 + HNRNPD chr4 83280792 - Exonic hg19 UCS TCGA-N8-A4PP 7 42 Out-of-frame Inter-chr Transcription factor q21.22 Seq+ 56326 ChimerSeq STARFusion TCGA_RNA-Seq ENSAP2-KLHDC9 ENSAP2 chr14 83159051 - KLHDC9 chr1 161069851 + Exonic hg19 UCS TCGA-N8-A4PP 6 20 Out-of-frame Inter-chr q31.1 q23.3 Seq+ 56327 ChimerSeq STARFusion TCGA_RNA-Seq PPP1CB-PLB1 PPP1CB chr2 29022231 + PLB1 chr2 28785908 + Exonic hg19 UCS TCGA-N8-A4PP 5 23 3'UTR-CDS Intra-chr p23.2 p23.2 Seq+ 56328 ChimerSeq STARFusion TCGA_RNA-Seq TXNDC15-C5orf24 TXNDC15 chr5 134229345 + C5orf24 chr5 134193047 + Exonic hg19 UCS TCGA-N8-A4PP 3 27 CDS-3'UTR Intra-chr q31.1 q31.1 56329 ChimerSeq STARFusion TCGA_RNA-Seq BICD1-KIAA1551 BICD1 chr12 32369393 + KIAA1551 chr12 32133812 + Exonic hg19 UCS TCGA-N8-A4PP 3 15 Out-of-frame Intra-chr p11.21 p11.21 56330 ChimerSeq STARFusion TCGA_RNA-Seq BICD1-KIAA1551 BICD1 chr12 32369393 + KIAA1551 chr12 32145312 + Exonic hg19 UCS TCGA-N8-A4PP 2 15 Out-of-frame Intra-chr p11.21 p11.21 56331 ChimerSeq STARFusion TCGA_RNA-Seq BCAR3-DNTTIP2 BCAR3 chr1 94311123 - DNTTIP2 chr1 94338770 - Exonic hg19 UCS TCGA-N8-A4PP 2 14 5'UTR-CDS Intra-chr p22.1 p22.1 Seq+ 56332 ChimerSeq STARFusion TCGA_RNA-Seq RAB7A-TRMT1 RAB7A chr3 128526514 + TRMT1 chr19 13221120 - Exonic hg19 UCS TCGA-N8-A4PP 3 7 In-Frame Inter-chr q21.3 Tumor suppressor gene p13.13 Seq+ 56333 ChimerSeq STARFusion TCGA_RNA-Seq LPIN2-MYOM1 LPIN2 chr18 3013085 - MYOM1 chr18 3079340 - Exonic hg19 UCS TCGA-N8-A4PP 2 10 5'UTR-CDS Intra-chr p11.31 p11.31 Seq+ 56334 ChimerSeq STARFusion TCGA_RNA-Seq RCL1-SMCP RCL1 chr9 4841357 + SMCP chr1 152856879 + Exonic hg19 UCS TCGA-N8-A4PP 3 5 CDS-5'UTR Inter-chr p24.1 q21.3 Seq+ 56335 ChimerSeq STARFusion TCGA_RNA-Seq STXBP1-TTC16 STXBP1 chr9 130374719 + TTC16 chr9 130482357 + Exonic hg19 UCS TCGA-N8-A4PP 2 8 Out-of-frame Intra-chr q34.11 q34.11 56336 ChimerSeq STARFusion TCGA_RNA-Seq ZNF430-OR7E24 ZNF430 chr19 21216990 + OR7E24 chr19 9361761 + Exonic hg19 UCS TCGA-N8-A4PP 3 4 Out-of-frame Intra-chr Transcription factor p13.2 Seq+ 56337 ChimerSeq STARFusion TCGA_RNA-Seq ADCY9-NLRC3 ADCY9 chr16 4163751 - NLRC3 chr16 3594329 - Exonic hg19 UCS TCGA-N8-A4PP 2 6 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 56338 ChimerSeq STARFusion TCGA_RNA-Seq CRY2-C11orf49 CRY2 chr11 45880424 + C11orf49 chr11 47073939 + Exonic hg19 UCS TCGA-N8-A4PP 2 5 In-Frame Intra-chr p11.2 p11.2 Seq+ 56339 ChimerSeq STARFusion TCGA_RNA-Seq MYL6-UBB MYL6 chr12 56553406 + UBB chr17 16285216 + Exonic hg19 UCS TCGA-N8-A4PP 2 1 CDS-5'UTR Inter-chr q13.2 p11.2 56340 ChimerSeq STARFusion TCGA_RNA-Seq RARA-SLC9A3R1 RARA chr17 38508759 + SLC9A3R1 chr17 72758151 + Exonic hg19 UCS TCGA-N8-A4PQ 31 153 In-Frame Intra-chr q21.2 Oncogene Transcription factor q25.1 Tumor suppressor gene Seq+ 56341 ChimerSeq STARFusion TCGA_RNA-Seq MPRIP-HOXB13 MPRIP chr17 16981390 + HOXB13 chr17 46804405 - Exonic hg19 UCS TCGA-N8-A4PQ 14 112 Out-of-frame Intra-chr p11.2 q21.32 Tumor suppressor gene Transcription factor Seq+ 56342 ChimerSeq STARFusion TCGA_RNA-Seq ZNF423-CCAR1 ZNF423 chr16 49764682 - CCAR1 chr10 70545893 + Exonic hg19 UCS TCGA-N8-A4PQ 2 106 In-Frame Inter-chr q12.1 Transcription factor q21.3 Tumor suppressor gene Seq+ 56343 ChimerSeq STARFusion TCGA_RNA-Seq ACOT11-GIP ACOT11 chr1 55008110 + GIP chr17 47044615 - Exonic hg19 UCS TCGA-N8-A4PQ 10 37 5'UTR-5'UTR Inter-chr p32.3 q21.32 Seq+ 56344 ChimerSeq STARFusion TCGA_RNA-Seq DGKD-SLC25A17 DGKD chr2 234299129 + SLC25A17 chr22 41175129 - Exonic hg19 UCS TCGA-N8-A4PQ 9 40 Out-of-frame Inter-chr q13.2 Seq+ 56345 ChimerSeq STARFusion TCGA_RNA-Seq TMX2-MED19 TMX2 chr11 57480279 + MED19 chr11 57472701 - Exonic hg19 UCS TCGA-N8-A4PQ 5 36 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 56346 ChimerSeq STARFusion TCGA_RNA-Seq GNA13-MXRA7 GNA13 chr17 63049620 - MXRA7 chr17 74681247 - Exonic hg19 UCS TCGA-N8-A4PQ 6 31 Out-of-frame Intra-chr q24.1 q25.1 Seq+ 56347 ChimerSeq STARFusion TCGA_RNA-Seq MKL1-INPP5D MKL1 chr22 40948110 - INPP5D chr2 234077951 + Exonic hg19 UCS TCGA-N8-A4PQ 5 18 5'UTR-CDS Inter-chr q13.2 Seq+ 56348 ChimerSeq STARFusion TCGA_RNA-Seq SPECC1L-CABIN1 SPECC1L chr22 24810712 + CABIN1 chr22 24530269 + Exonic hg19 UCS TCGA-N8-A4PQ 4 21 3'UTR-CDS Intra-chr q11.23 Seq+ 56349 ChimerSeq STARFusion TCGA_RNA-Seq SPECC1L-CABIN1 SPECC1L chr22 24810516 + CABIN1 chr22 24530269 + Exonic hg19 UCS TCGA-N8-A4PQ 3 21 In-Frame Intra-chr q11.23 Seq+ 56350 ChimerSeq STARFusion TCGA_RNA-Seq RCOR1-TECPR2 RCOR1 chr14 103059662 + TECPR2 chr14 102963316 + Exonic hg19 UCS TCGA-N8-A4PQ 4 11 Out-of-frame Intra-chr q32.31 q32.31 Seq+ 56351 ChimerSeq STARFusion TCGA_RNA-Seq CREBZF-NARS2 CREBZF chr11 85393760 - NARS2 chr11 78204241 - Exonic hg19 UCS TCGA-N8-A4PQ 3 6 5'UTR-CDS Intra-chr q14.1 Transcription factor q14.1 56352 ChimerSeq STARFusion TCGA_RNA-Seq RASA4-C22orf43 RASA4 chr7 102249208 - C22orf43 chr22 23964363 - Exonic hg19 UCS TCGA-N8-A4PQ 2 9 In-Frame Inter-chr q22.1 56353 ChimerSeq STARFusion TCGA_RNA-Seq SOX13-PPFIA4 SOX13 chr1 204042839 + PPFIA4 chr1 203022881 + Exonic hg19 UCS TCGA-N8-A4PQ 2 7 5'UTR-CDS Intra-chr q32.1 Transcription factor q32.1 Seq+ 56354 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-ABL1 FCHSD2 chr11 72794740 - ABL1 chr9 133729451 + Exonic hg19 UCS TCGA-N8-A4PQ 2 3 Out-of-frame Inter-chr q13.4 q34.12 TK:Abl Oncogene Seq+ 56355 ChimerSeq STARFusion TCGA_RNA-Seq OCLN-NUDT3 OCLN chr5 68800121 + NUDT3 chr6 34263462 - Exonic hg19 UCS TCGA-N5-A4RS 9 14 Out-of-frame Inter-chr q13.2 p21.31 Seq+ 56356 ChimerSeq STARFusion TCGA_RNA-Seq RNF2-MRC2 RNF2 chr1 185056772 + MRC2 chr17 60741909 + Exonic hg19 UCS TCGA-N5-A4RS 3 11 Out-of-frame Inter-chr q25.3 Oncogene q23.2 Seq+ 56357 ChimerSeq STARFusion TCGA_RNA-Seq RCCD1-AGPAT2 RCCD1 chr15 91504978 + AGPAT2 chr9 139568167 - Exonic hg19 UCS TCGA-N5-A4RS 3 1 Out-of-frame Inter-chr q26.1 q34.3 56358 ChimerSeq STARFusion TCGA_RNA-Seq IGF2BP2-IFITM2 IGF2BP2 chr3 185540941 - IFITM2 chr11 308231 + Exonic hg19 UCS TCGA-ND-A4WF 39 163 Out-of-frame Inter-chr q27.2 p15.5 Seq+ 56359 ChimerSeq STARFusion TCGA_RNA-Seq TRA2B-LEPREL1 TRA2B chr3 185655613 - LEPREL1 chr3 189681887 - Exonic hg19 UCS TCGA-ND-A4WF 10 103 In-Frame Intra-chr q27.2 Seq+ 56360 ChimerSeq STARFusion TCGA_RNA-Seq EYA2-MYLK2 EYA2 chr20 45725807 + MYLK2 chr20 30418622 + Exonic hg19 UCS TCGA-ND-A4WF 19 66 In-Frame Intra-chr q13.12 q11.21 Seq+ 56361 ChimerSeq STARFusion TCGA_RNA-Seq TRA2B-LEPREL1 TRA2B chr3 185649365 - LEPREL1 chr3 189681887 - Exonic hg19 UCS TCGA-ND-A4WF 9 103 5'UTR-CDS Intra-chr q27.2 Seq+ 56362 ChimerSeq STARFusion TCGA_RNA-Seq RAB40C-HBZ RAB40C chr16 640433 + HBZ chr16 202892 + Exonic hg19 UCS TCGA-ND-A4WF 10 90 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 56363 ChimerSeq STARFusion TCGA_RNA-Seq DALRD3-IMPDH2 DALRD3 chr3 49058279 - IMPDH2 chr3 49062235 - Exonic hg19 UCS TCGA-ND-A4WF 14 55 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 56364 ChimerSeq STARFusion TCGA_RNA-Seq SPOP-EPHX2 SPOP chr17 47755295 - EPHX2 chr8 27358443 + Exonic hg19 UCS TCGA-ND-A4WF 6 25 5'UTR-CDS Inter-chr q21.33 Oncogene Tumor suppressor gene p21.2 Seq+ 56365 ChimerSeq STARFusion TCGA_RNA-Seq TRABD2B-PSMD13 TRABD2B chr1 48459706 - PSMD13 chr11 244041 + Exonic hg19 UCS TCGA-ND-A4WF 6 22 Out-of-frame Inter-chr p33 p15.5 Seq+ 56366 ChimerSeq STARFusion TCGA_RNA-Seq CTNNB1-IGF2BP2 CTNNB1 chr3 41241161 + IGF2BP2 chr3 185416135 - Exonic hg19 UCS TCGA-ND-A4WF 3 23 5'UTR-CDS Intra-chr p22.1 Oncogene q27.2 Seq+ 56367 ChimerSeq STARFusion TCGA_RNA-Seq RASSF8-ST8SIA1 RASSF8 chr12 26112081 + ST8SIA1 chr12 22354972 - Exonic hg19 UCS TCGA-ND-A4WF 3 13 5'UTR-CDS Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 56368 ChimerSeq STARFusion TCGA_RNA-Seq ELAVL1-ATXN10 ELAVL1 chr19 8038609 - ATXN10 chr22 46238871 + Exonic hg19 UCS TCGA-ND-A4WF 2 8 In-Frame Inter-chr p13.2 q13.31 Seq+ 56369 ChimerSeq STARFusion TCGA_RNA-Seq ADCK5-CPSF1 ADCK5 chr8 145608431 + CPSF1 chr8 145619375 - Exonic hg19 UCS TCGA-ND-A4WF 2 7 Out-of-frame Intra-chr q24.3 Atypical:ABC1 q24.3 Seq+ 56370 ChimerSeq STARFusion TCGA_RNA-Seq FOXM1-ANO2 FOXM1 chr12 2973486 - ANO2 chr12 5641280 - Exonic hg19 UCS TCGA-ND-A4WF 2 7 CDS-3'UTR Intra-chr p13.33 Transcription factor p13.31 Seq+ 56371 ChimerSeq STARFusion TCGA_RNA-Seq NUDT3-TCP11 NUDT3 chr6 34360041 - TCP11 chr6 35096959 - Exonic hg19 UCS TCGA-N5-A4RU 9 36 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 56372 ChimerSeq STARFusion TCGA_RNA-Seq NUDT3-TCP11 NUDT3 chr6 34360041 - TCP11 chr6 35090114 - Exonic hg19 UCS TCGA-N5-A4RU 4 36 In-Frame Intra-chr p21.31 p21.31 Seq+ 56373 ChimerSeq STARFusion TCGA_RNA-Seq NUDT3-TCP11 NUDT3 chr6 34360041 - TCP11 chr6 35103995 - Exonic hg19 UCS TCGA-N5-A4RU 2 36 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 56374 ChimerSeq STARFusion TCGA_RNA-Seq LYRM4-RPP40 LYRM4 chr6 5216851 - RPP40 chr6 5002479 - Exonic hg19 UCS TCGA-N5-A4RU 4 4 In-Frame Intra-chr p25.1 p25.1 Seq+ 56375 ChimerSeq STARFusion TCGA_RNA-Seq NPIPB5-PHKG2 NPIPB5 chr16 22530590 + PHKG2 chr16 30762427 + Exonic hg19 UCS TCGA-N5-A4RU 4 2 Out-of-frame Intra-chr p12.2 p11.2 56376 ChimerSeq STARFusion TCGA_RNA-Seq LHFPL2-TCF7 LHFPL2 chr5 77928087 - TCF7 chr5 133451012 + Exonic hg19 UCS TCGA-N5-A4RU 2 1 5'UTR-CDS Intra-chr q14.1 q31.1 Transcription factor 56377 ChimerSeq STARFusion TCGA_RNA-Seq FAM65C-RPAP1 FAM65C chr20 49227390 - RPAP1 chr15 41823400 - Exonic hg19 UCS TCGA-N5-A4RU 2 0 Out-of-frame Inter-chr q15.1 56378 ChimerSeq STARFusion TCGA_RNA-Seq THRA-KRT20 THRA chr17 38245586 + KRT20 chr17 39033669 - Exonic hg19 UCS TCGA-N5-A4RT 80 451 Out-of-frame Intra-chr q21.1 Tumor suppressor gene Transcription factor Seq+ 56379 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-DEFB123 TPX2 chr20 30371724 + DEFB123 chr20 30037832 + Exonic hg19 UCS TCGA-N5-A4RT 52 384 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 56380 ChimerSeq STARFusion TCGA_RNA-Seq PPP6R2-ZDHHC6 PPP6R2 chr22 50845304 + ZDHHC6 chr10 114190665 - Exonic hg19 UCS TCGA-N5-A4RT 10 140 Out-of-frame Inter-chr q13.33 q25.2 Seq+ 56381 ChimerSeq STARFusion TCGA_RNA-Seq RHOT2-DPEP1 RHOT2 chr16 723205 + DPEP1 chr16 89704042 + Exonic hg19 UCS TCGA-N5-A4RT 7 68 Out-of-frame Intra-chr p13.3 q24.3 Seq+ 56382 ChimerSeq STARFusion TCGA_RNA-Seq RHOT2-DPEP1 RHOT2 chr16 723130 + DPEP1 chr16 89704040 + Exonic hg19 UCS TCGA-N5-A4RT 4 68 Out-of-frame Intra-chr p13.3 q24.3 Seq+ 56383 ChimerSeq STARFusion TCGA_RNA-Seq DENND1A-PSMB7 DENND1A chr9 126414292 - PSMB7 chr9 127146935 - Exonic hg19 UCS TCGA-N5-A4RT 3 37 Out-of-frame Intra-chr q33.3 q33.3 Seq+ 56384 ChimerSeq STARFusion TCGA_RNA-Seq DENND1A-PSMB7 DENND1A chr9 126414292 - PSMB7 chr9 127119194 - Exonic hg19 UCS TCGA-N5-A4RT 3 37 In-Frame Intra-chr q33.3 q33.3 Seq+ 56385 ChimerSeq STARFusion TCGA_RNA-Seq SMARCA4-DNM2 SMARCA4 chr19 11170863 + DNM2 chr19 10939712 + Exonic hg19 UCS TCGA-N5-A4RT 5 10 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 56386 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D23-TMEM30C TBC1D23 chr3 100009545 + TMEM30C chr3 99908785 + Exonic hg19 UCS TCGA-N5-A4RT 3 16 CDS-5'UTR Intra-chr q12.1 Seq+ 56387 ChimerSeq STARFusion TCGA_RNA-Seq TRAF3-WDR20 TRAF3 chr14 103369766 + WDR20 chr14 102661275 + Exonic hg19 UCS TCGA-N5-A4RT 4 10 Out-of-frame Intra-chr q32.32 q32.31 Seq+ 56388 ChimerSeq STARFusion TCGA_RNA-Seq RCAN1-RUNX1 RCAN1 chr21 35987059 - RUNX1 chr21 36253010 - Exonic hg19 UCS TCGA-N5-A4RT 3 7 In-Frame Intra-chr q22.12 q22.12 Oncogene Tumor suppressor gene Transcription factor Seq+ 56389 ChimerSeq STARFusion TCGA_RNA-Seq ALG12-DENND6B ALG12 chr22 50297827 - DENND6B chr22 50757432 - Exonic hg19 UCS TCGA-N5-A4RT 2 7 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 56390 ChimerSeq STARFusion TCGA_RNA-Seq SMARCC1-DHX30 SMARCC1 chr3 47814307 - DHX30 chr3 47846816 + Exonic hg19 UCS TCGA-N5-A4RT 2 7 CDS-5'UTR Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 56391 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP1-DNM3OS CTDSP1 chr2 219267128 + DNM3OS chr1 172113577 - Exonic hg19 UCS TCGA-N5-A4RT 2 3 CDS-3'UTR Inter-chr q35 q24.3 56392 ChimerSeq STARFusion TCGA_RNA-Seq WNK1-ERC1 WNK1 chr12 863490 + ERC1 chr12 1480999 + Exonic hg19 UCS TCGA-N5-A4RV 7 47 Out-of-frame Intra-chr p13.33 Seq+ 56393 ChimerSeq STARFusion TCGA_RNA-Seq WNK1-ERC1 WNK1 chr12 863490 + ERC1 chr12 1517315 + Exonic hg19 UCS TCGA-N5-A4RV 3 47 In-Frame Intra-chr p13.33 Seq+ 56394 ChimerSeq STARFusion TCGA_RNA-Seq KARS-PLGRKT KARS chr16 75674082 - PLGRKT chr9 5361888 - Exonic hg19 UCS TCGA-N5-A4RV 4 41 Out-of-frame Inter-chr q23.1 p24.1 Seq+ 56395 ChimerSeq STARFusion TCGA_RNA-Seq TTC7B-HTRA3 TTC7B chr14 91211136 - HTRA3 chr4 8284164 + Exonic hg19 UCS TCGA-N5-A4RV 4 10 Out-of-frame Inter-chr q32.11 p16.1 Tumor suppressor gene Seq+ 56396 ChimerSeq STARFusion TCGA_RNA-Seq MIF-IGLC2 MIF chr22 24237131 + IGLC2 chr22 23243156 + Exonic hg19 UCS TCGA-N5-A4RV 2 8 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q11.22 56397 ChimerSeq STARFusion TCGA_RNA-Seq KRBOX4-CHST7 KRBOX4 chrX 46322728 + CHST7 chrX 46457195 + Exonic hg19 UCS TCGA-N5-A4RV 2 1 Out-of-frame Intra-chr p11.3 p11.3 56398 ChimerSeq STARFusion TCGA_RNA-Seq CTNND2-DAP CTNND2 chr5 11565056 - DAP chr5 10683683 - Exonic hg19 UCS TCGA-N6-A4VD 6 33 In-Frame Intra-chr p15.2 p15.2 Seq+ 56399 ChimerSeq STARFusion TCGA_RNA-Seq FUT2-RASIP1 FUT2 chr19 49199346 + RASIP1 chr19 49228217 - Exonic hg19 UCS TCGA-N6-A4VE 12 185 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 56400 ChimerSeq STARFusion TCGA_RNA-Seq FUT2-RASIP1 FUT2 chr19 49199336 + RASIP1 chr19 49228217 - Exonic hg19 UCS TCGA-N6-A4VE 12 185 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 56401 ChimerSeq STARFusion TCGA_RNA-Seq FUT2-RASIP1 FUT2 chr19 49199336 + RASIP1 chr19 49227766 - Exonic hg19 UCS TCGA-N6-A4VE 2 185 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 56402 ChimerSeq STARFusion TCGA_RNA-Seq BCL2L13-DGCR14 BCL2L13 chr22 18166087 + DGCR14 chr22 19124945 - Exonic hg19 UCS TCGA-N6-A4VE 22 91 In-Frame Intra-chr q11.21 q11.21 Seq+ 56403 ChimerSeq STARFusion TCGA_RNA-Seq C6orf106-FKBP5 C6orf106 chr6 34664223 - FKBP5 chr6 35610620 - Exonic hg19 UCS TCGA-N6-A4VE 10 77 CDS-5'UTR Intra-chr p21.31 p21.31 Seq+ 56404 ChimerSeq STARFusion TCGA_RNA-Seq PDRG1-C20orf112 PDRG1 chr20 30536611 - C20orf112 chr20 31099259 - Exonic hg19 UCS TCGA-N6-A4VE 4 91 In-Frame Intra-chr q11.21 Seq+ 56405 ChimerSeq STARFusion TCGA_RNA-Seq PDRG1-C20orf112 PDRG1 chr20 30538115 - C20orf112 chr20 31115716 - Exonic hg19 UCS TCGA-N6-A4VE 2 91 Out-of-frame Intra-chr q11.21 Seq+ 56406 ChimerSeq STARFusion TCGA_RNA-Seq EML1-CCNK EML1 chr14 100367376 + CCNK chr14 99973413 + Exonic hg19 UCS TCGA-N6-A4VE 7 32 Out-of-frame Intra-chr q32.2 q32.2 Seq+ 56407 ChimerSeq STARFusion TCGA_RNA-Seq THAP9-COPS4 THAP9 chr4 83827780 + COPS4 chr4 83970319 + Exonic hg19 UCS TCGA-N6-A4VE 5 23 In-Frame Intra-chr q21.22 Transcription factor q21.22 56408 ChimerSeq STARFusion TCGA_RNA-Seq TPTEP1-CECR7 TPTEP1 chr22 17083105 + CECR7 chr22 17525763 + Exonic hg19 UCS TCGA-N6-A4VE 2 21 5'UTR-5'UTR Intra-chr q11.1 q11.1 Seq+ 56409 ChimerSeq STARFusion TCGA_RNA-Seq PSMD8-TJP3 PSMD8 chr19 38865601 + TJP3 chr19 3728422 + Exonic hg19 UCS TCGA-N6-A4VE 2 7 In-Frame Intra-chr q13.2 p13.3 Seq+ 56410 ChimerSeq STARFusion TCGA_RNA-Seq ITM2B-RB1 ITM2B chr13 48807613 + RB1 chr13 48947541 + Exonic hg19 UCS TCGA-N6-A4VE 2 6 Out-of-frame Intra-chr q14.2 q14.2 Oncogene Tumor suppressor gene Seq+ 56411 ChimerSeq STARFusion TCGA_RNA-Seq SYN2-PPARG SYN2 chr3 12224872 + PPARG chr3 12421203 + Exonic hg19 UCS TCGA-N6-A4VE 2 0 In-Frame Intra-chr p25.2 p25.2 Oncogene Tumor suppressor gene Transcription factor 56412 ChimerSeq STARFusion TCGA_RNA-Seq TTYH3-NOC4L TTYH3 chr7 2671912 + NOC4L chr12 132635526 + Exonic hg19 UCS TCGA-N6-A4VE 2 0 Out-of-frame Inter-chr p22.3 q24.33 Seq+ 56413 ChimerSeq STARFusion TCGA_RNA-Seq ZNF207-RHOT1 ZNF207 chr17 30678931 + RHOT1 chr17 30580104 + Exonic hg19 UCS TCGA-N6-A4VF 84 253 CDS-3'UTR Intra-chr q11.2 Transcription factor q11.2 Seq+ 56414 ChimerSeq STARFusion TCGA_RNA-Seq NARF-P4HB NARF chr17 80439087 + P4HB chr17 79817263 - Exonic hg19 UCS TCGA-N6-A4VF 2 20 In-Frame Intra-chr q25.3 q25.3 Seq+ 56415 ChimerSeq STARFusion TCGA_RNA-Seq NARF-KRT24 NARF chr17 80422306 + KRT24 chr17 38858185 - Exonic hg19 UCS TCGA-N6-A4VF 3 7 In-Frame Intra-chr q25.3 q21.2 Seq+ 56416 ChimerSeq STARFusion TCGA_RNA-Seq TLCD1-CRYBA1 TLCD1 chr17 27051757 - CRYBA1 chr17 27579082 + Exonic hg19 UCS TCGA-N6-A4VF 3 6 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 56417 ChimerSeq STARFusion TCGA_RNA-Seq PHF21A-GDPD5 PHF21A chr11 45991366 - GDPD5 chr11 75173934 - Exonic hg19 UCS TCGA-N6-A4VF 2 2 In-Frame Intra-chr p11.2 Transcription factor q13.5 56418 ChimerSeq STARFusion TCGA_RNA-Seq ACLY-FAM117A ACLY chr17 40060982 - FAM117A chr17 47810082 - Exonic hg19 UCS TCGA-N6-A4VF 2 1 Out-of-frame Intra-chr q21.2 q21.33 56419 ChimerSeq STARFusion TCGA_RNA-Seq PRKRIR-TIMP3 PRKRIR chr11 76072000 - TIMP3 chr22 33245439 + Exonic hg19 UCS TCGA-N5-A4RJ 8 9 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene 56420 ChimerSeq STARFusion TCGA_RNA-Seq UBASH3A-SFTA2 UBASH3A chr21 43857690 + SFTA2 chr6 30899572 - Exonic hg19 UCS TCGA-N5-A4RJ 2 24 In-Frame Inter-chr q22.3 Seq+ 56421 ChimerSeq STARFusion TCGA_RNA-Seq UNC13D-FBF1 UNC13D chr17 73824038 - FBF1 chr17 73914350 - Exonic hg19 UCS TCGA-N5-A4RJ 2 15 3'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 56422 ChimerSeq STARFusion TCGA_RNA-Seq KIF13B-LINC00568 KIF13B chr8 28965656 - LINC00568 chr1 150490249 + Exonic hg19 UCS TCGA-N5-A4RJ 2 3 Out-of-frame Inter-chr p12 56423 ChimerSeq STARFusion TCGA_RNA-Seq EPS15-CCT4 EPS15 chr1 51868107 - CCT4 chr2 62096688 - Exonic hg19 UCS TCGA-N5-A4RJ 2 1 Out-of-frame Inter-chr p32.3 p15 Seq+ 56424 ChimerSeq STARFusion TCGA_RNA-Seq ELL-ARL4D ELL chr19 18632731 - ARL4D chr17 41477029 + Exonic hg19 UCS TCGA-N5-A4RM 4 8 CDS-5'UTR Inter-chr p13.11 q21.31 Seq+ 56425 ChimerSeq STARFusion TCGA_RNA-Seq RNF38-GRHPR RNF38 chr9 36400933 - GRHPR chr9 37425919 + Exonic hg19 UCS TCGA-N5-A4RM 3 6 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 56426 ChimerSeq STARFusion TCGA_RNA-Seq TM9SF4-DEFB123 TM9SF4 chr20 30742989 + DEFB123 chr20 30037832 + Exonic hg19 UCS TCGA-N8-A4PM 69 487 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 56427 ChimerSeq STARFusion TCGA_RNA-Seq PFDN1-DNMT3L PFDN1 chr5 139680001 - DNMT3L chr21 45666445 - Exonic hg19 UCS TCGA-N8-A4PM 3 45 In-Frame Inter-chr q31.3 q22.3 Seq+ 56428 ChimerSeq STARFusion TCGA_RNA-Seq PFDN1-DNMT3L PFDN1 chr5 139680001 - DNMT3L chr21 45666448 - Exonic hg19 UCS TCGA-N8-A4PM 3 45 In-Frame Inter-chr q31.3 q22.3 Seq+ 56429 ChimerSeq STARFusion TCGA_RNA-Seq MSH2-SPTLC1 MSH2 chr2 47672796 + SPTLC1 chr9 94800647 - Exonic hg19 UCS TCGA-N8-A4PM 5 11 Out-of-frame Inter-chr p21 Oncogene Tumor suppressor gene q22.31 Seq+ 56430 ChimerSeq STARFusion TCGA_RNA-Seq MAP4-CDC25A MAP4 chr3 48130263 - CDC25A chr3 48215947 - Exonic hg19 UCS TCGA-N8-A4PM 3 9 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 56431 ChimerSeq STARFusion TCGA_RNA-Seq MAU2-MAP1S MAU2 chr19 19446996 + MAP1S chr19 17845082 + Exonic hg19 UCS TCGA-N5-A4RO 47 274 In-Frame Intra-chr p13.11 p13.11 Seq+ 56432 ChimerSeq STARFusion TCGA_RNA-Seq CAMK2G-MYOZ1 CAMK2G chr10 75597226 - MYOZ1 chr10 75399793 - Exonic hg19 UCS TCGA-N5-A4RO 33 171 CDS-5'UTR Intra-chr q22.2 q22.2 Seq+ 56433 ChimerSeq STARFusion TCGA_RNA-Seq WFDC2-COMMD7 WFDC2 chr20 44108734 + COMMD7 chr20 31315949 - Exonic hg19 UCS TCGA-N5-A4RO 11 50 3'UTR-CDS Intra-chr q13.12 q11.21 Seq+ 56434 ChimerSeq STARFusion TCGA_RNA-Seq NCKAP5L-C12orf60 NCKAP5L chr12 50222105 - C12orf60 chr12 15056941 + Exonic hg19 UCS TCGA-N5-A4RO 4 53 5'UTR-3'UTR Intra-chr q13.12 p12.3 Seq+ 56435 ChimerSeq STARFusion TCGA_RNA-Seq SENP6-MYO6 SENP6 chr6 76312292 + MYO6 chr6 76554614 + Exonic hg19 UCS TCGA-N5-A4RO 2 53 Out-of-frame Intra-chr q14.1 q14.1 56436 ChimerSeq STARFusion TCGA_RNA-Seq SENP6-MYO6 SENP6 chr6 76312292 + MYO6 chr6 76558068 + Exonic hg19 UCS TCGA-N5-A4RO 2 53 Out-of-frame Intra-chr q14.1 q14.1 56437 ChimerSeq STARFusion TCGA_RNA-Seq WFDC2-COMMD7 WFDC2 chr20 44108734 + COMMD7 chr20 31315946 - Exonic hg19 UCS TCGA-N5-A4RO 2 50 3'UTR-CDS Intra-chr q13.12 q11.21 Seq+ 56438 ChimerSeq STARFusion TCGA_RNA-Seq TMTC2-SOCS2 TMTC2 chr12 83081448 + SOCS2 chr12 93966461 + Exonic hg19 UCS TCGA-N5-A4RO 3 15 CDS-5'UTR Intra-chr q21.31 q22 Seq+ 56439 ChimerSeq STARFusion TCGA_RNA-Seq PRDX6-DARS2 PRDX6 chr1 173450621 + DARS2 chr1 173795825 + Exonic hg19 UCS TCGA-N5-A4RO 2 6 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 56440 ChimerSeq STARFusion TCGA_RNA-Seq CD44-CAPRIN1 CD44 chr11 35160917 + CAPRIN1 chr11 34110942 + Exonic hg19 UCS TCGA-N5-A4RO 2 5 In-Frame Intra-chr p13 Oncogene Tumor suppressor gene p13 Seq+ 56441 ChimerSeq STARFusion TCGA_RNA-Seq COL1A1-LRP1 COL1A1 chr17 48263679 - LRP1 chr12 57584765 + Exonic hg19 UCS TCGA-N5-A4RN 5 1 Out-of-frame Inter-chr q21.33 Oncogene q13.3 56442 ChimerSeq STARFusion TCGA_RNA-Seq COL1A1-FGFR1 COL1A1 chr17 48262117 - FGFR1 chr8 38270335 - Exonic hg19 UCS TCGA-N5-A4RN 3 3 Out-of-frame Inter-chr q21.33 Oncogene p11.23 TK:FGFR Oncogene 56443 ChimerSeq STARFusion TCGA_RNA-Seq CTDSP1-DNM3OS CTDSP1 chr2 219267128 + DNM3OS chr1 172113577 - Exonic hg19 UCS TCGA-N5-A4RN 2 4 CDS-3'UTR Inter-chr q35 q24.3 56444 ChimerSeq STARFusion TCGA_RNA-Seq NUP160-RBM6 NUP160 chr11 47869400 - RBM6 chr3 50114441 + Exonic hg19 UCS TCGA-N5-A4RA 28 120 Out-of-frame Inter-chr p11.2 p21.31 Tumor suppressor gene Seq+ 56445 ChimerSeq STARFusion TCGA_RNA-Seq RNF13-TM4SF4 RNF13 chr3 149589941 + TM4SF4 chr3 149205406 + Exonic hg19 UCS TCGA-N5-A4RA 2 57 In-Frame Intra-chr q25.1 q25.1 Seq+ 56446 ChimerSeq STARFusion TCGA_RNA-Seq COL3A1-GULP1 COL3A1 chr2 189869090 + GULP1 chr2 189387483 + Exonic hg19 UCS TCGA-N5-A4RA 9 27 In-Frame Intra-chr q32.2 q32.1 Seq+ 56447 ChimerSeq STARFusion TCGA_RNA-Seq NUP210L-TPM3 NUP210L chr1 153984720 - TPM3 chr1 154131524 - Exonic hg19 UCS TCGA-N5-A4RA 8 30 In-Frame Intra-chr q21.3 q21.3 Seq+ 56448 ChimerSeq STARFusion TCGA_RNA-Seq BRD4-GNAT1 BRD4 chr19 15443101 - GNAT1 chr3 50230566 + Exonic hg19 UCS TCGA-N5-A4RA 11 5 5'UTR-CDS Inter-chr p13.12 Atypical:BRD p21.31 Tumor suppressor gene Seq+ 56449 ChimerSeq STARFusion TCGA_RNA-Seq UBE2L3-APOL1 UBE2L3 chr22 21965332 + APOL1 chr22 36657642 + Exonic hg19 UCS TCGA-N5-A4RA 5 29 In-Frame Intra-chr q11.21 q12.3 Seq+ 56450 ChimerSeq STARFusion TCGA_RNA-Seq WDR59-CFDP1 WDR59 chr16 74955845 - CFDP1 chr16 75339080 - Exonic hg19 UCS TCGA-N5-A4RA 7 15 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 56451 ChimerSeq STARFusion TCGA_RNA-Seq COL3A1-GULP1 COL3A1 chr2 189869090 + GULP1 chr2 189387499 + Exonic hg19 UCS TCGA-N5-A4RA 3 27 In-Frame Intra-chr q32.2 q32.1 Seq+ 56452 ChimerSeq STARFusion TCGA_RNA-Seq SLMAP-CYP11A1 SLMAP chr3 57743576 + CYP11A1 chr15 74640396 - Exonic hg19 UCS TCGA-N5-A4RA 6 9 Out-of-frame Inter-chr p14.3 q24.1 Seq+ 56453 ChimerSeq STARFusion TCGA_RNA-Seq FCHSD2-CDC42EP2 FCHSD2 chr11 72851076 - CDC42EP2 chr11 65088015 + Exonic hg19 UCS TCGA-N5-A4RA 3 20 CDS-5'UTR Intra-chr q13.4 q13.1 Seq+ 56454 ChimerSeq STARFusion TCGA_RNA-Seq GNPTG-RAB40C GNPTG chr16 1402307 + RAB40C chr16 675432 + Exonic hg19 UCS TCGA-N5-A4RA 4 14 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 56455 ChimerSeq STARFusion TCGA_RNA-Seq UQCC1-SHISA4 UQCC1 chr20 33999743 - SHISA4 chr1 201858573 + Exonic hg19 UCS TCGA-N5-A4RA 7 2 Out-of-frame Inter-chr q11.22 q32.1 Seq+ 56456 ChimerSeq STARFusion TCGA_RNA-Seq NUP210-MAST1 NUP210 chr3 13418956 - MAST1 chr19 12962748 + Exonic hg19 UCS TCGA-N5-A4RA 4 10 In-Frame Inter-chr p25.1 p13.13 AGC:MAST Seq+ 56457 ChimerSeq STARFusion TCGA_RNA-Seq ATP5G1-KPNB1 ATP5G1 chr17 46972696 + KPNB1 chr17 45753775 + Exonic hg19 UCS TCGA-N5-A4RA 2 16 Out-of-frame Intra-chr q21.32 q21.32 Seq+ 56458 ChimerSeq STARFusion TCGA_RNA-Seq SLIT3-SDCBP SLIT3 chr5 168175307 - SDCBP chr8 59494245 + Exonic hg19 UCS TCGA-N5-A4RA 3 9 In-Frame Inter-chr q35.1 q12.1 Seq+ 56459 ChimerSeq STARFusion TCGA_RNA-Seq ORC2-TRAK2 ORC2 chr2 201814277 - TRAK2 chr2 202245941 - Exonic hg19 UCS TCGA-N5-A4RA 2 8 Out-of-frame Intra-chr q33.1 q33.1 Seq+ 56460 ChimerSeq STARFusion TCGA_RNA-Seq EDF1-ASPSCR1 EDF1 chr9 139757358 - ASPSCR1 chr17 79974352 + Exonic hg19 UCS TCGA-N5-A4RA 2 1 Out-of-frame Inter-chr q34.3 q25.3 Seq+ 56461 ChimerSeq STARFusion TCGA_RNA-Seq EGLN2-CYP2G2P EGLN2 chr19 41307320 + CYP2G2P chr19 41562771 - Exonic hg19 UCS TCGA-NA-A4QX 32 189 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 56462 ChimerSeq STARFusion TCGA_RNA-Seq MTOR-MAD2L2 MTOR chr1 11227499 - MAD2L2 chr1 11740670 - Exonic hg19 UCS TCGA-NA-A4QX 13 75 CDS-5'UTR Intra-chr p36.22 Oncogene p36.22 Seq+ 56463 ChimerSeq STARFusion TCGA_RNA-Seq PHC3-NFKBIL1 PHC3 chr3 169889161 - NFKBIL1 chr6 31515940 + Exonic hg19 UCS TCGA-NA-A4QX 8 27 In-Frame Inter-chr q26.2 Tumor suppressor gene Seq+ 56464 ChimerSeq STARFusion TCGA_RNA-Seq EID2-TDRD12 EID2 chr19 40030642 - TDRD12 chr19 33222631 + Exonic hg19 UCS TCGA-NA-A4QX 3 7 Out-of-frame Intra-chr q13.2 q13.11 Seq+ 56465 ChimerSeq STARFusion TCGA_RNA-Seq DSCR4-KCNJ6 DSCR4 chr21 39492401 - KCNJ6 chr21 39213011 - Exonic hg19 UCS TCGA-NA-A4QX 3 6 CDS-5'UTR Intra-chr q22.13 q22.13 56466 ChimerSeq STARFusion TCGA_RNA-Seq ISCA1-GOLM1 ISCA1 chr9 88886922 - GOLM1 chr9 88694256 - Exonic hg19 UCS TCGA-NA-A4QX 2 4 CDS-5'UTR Intra-chr q21.33 q21.33 56467 ChimerSeq STARFusion TCGA_RNA-Seq PIGU-NCOA6 PIGU chr20 33162908 - NCOA6 chr20 33315211 - Exonic hg19 UCS TCGA-NA-A4QX 2 4 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 56468 ChimerSeq STARFusion TCGA_RNA-Seq ERBB2IP-NLN ERBB2IP chr5 65222634 + NLN chr5 65054394 + Exonic hg19 UCS TCGA-NA-A4QX 2 2 5'UTR-CDS Intra-chr q12.3 Seq+ 56469 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-SPEF2 NIPBL chr5 36877280 + SPEF2 chr5 35800070 + Exonic hg19 UCS TCGA-NF-A4WX 32 179 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 56470 ChimerSeq STARFusion TCGA_RNA-Seq NIPBL-SPEF2 NIPBL chr5 36877280 + SPEF2 chr5 35806809 + Exonic hg19 UCS TCGA-NF-A4WX 5 179 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 56471 ChimerSeq STARFusion TCGA_RNA-Seq SLC27A1-KIAA0391 SLC27A1 chr19 17599926 + KIAA0391 chr14 35735933 + Exonic hg19 UCS TCGA-NF-A4WX 8 46 In-Frame Inter-chr p13.11 q13.2 Seq+ 56472 ChimerSeq STARFusion TCGA_RNA-Seq SLC27A1-KIAA0391 SLC27A1 chr19 17599926 + KIAA0391 chr14 35735933 + Exonic hg19 UCS TCGA-NF-A4WX 8 46 In-Frame Inter-chr p13.11 q13.2 Seq+ 56473 ChimerSeq STARFusion TCGA_RNA-Seq GPR137-RARRES3 GPR137 chr11 64056614 + RARRES3 chr11 63313621 + Exonic hg19 UCS TCGA-NF-A4WX 6 44 Out-of-frame Intra-chr q13.1 q12.3 Tumor suppressor gene Seq+ 56474 ChimerSeq STARFusion TCGA_RNA-Seq GPR137-RARRES3 GPR137 chr11 64056193 + RARRES3 chr11 63313621 + Exonic hg19 UCS TCGA-NF-A4WX 4 44 Out-of-frame Intra-chr q13.1 q12.3 Tumor suppressor gene Seq+ 56475 ChimerSeq STARFusion TCGA_RNA-Seq TMEM131-PLA2G6 TMEM131 chr2 98408849 - PLA2G6 chr22 38531091 - Exonic hg19 UCS TCGA-NF-A4WX 7 32 Out-of-frame Inter-chr q11.2 q13.1 Seq+ 56476 ChimerSeq STARFusion TCGA_RNA-Seq SF3A3-HPCAL4 SF3A3 chr1 38425792 - HPCAL4 chr1 40150283 - Exonic hg19 UCS TCGA-NF-A4WX 7 30 CDS-5'UTR Intra-chr p34.3 p34.2 Seq+ 56477 ChimerSeq STARFusion TCGA_RNA-Seq KCNQ1-LSP1 KCNQ1 chr11 2466714 + LSP1 chr11 1901317 + Exonic hg19 UCS TCGA-NF-A4WX 6 19 In-Frame Intra-chr p15.5 p15.5 Seq+ 56478 ChimerSeq STARFusion TCGA_RNA-Seq EIF2S2P4-PIGU EIF2S2P4 chr2 171608979 + PIGU chr20 33176411 - Exonic hg19 UCS TCGA-NF-A4WX 4 22 Out-of-frame Inter-chr q31.1 q11.22 Seq+ 56479 ChimerSeq STARFusion TCGA_RNA-Seq CHEK2-THOC5 CHEK2 chr22 29085123 - THOC5 chr22 29932727 - Exonic hg19 UCS TCGA-NF-A4WX 6 8 Out-of-frame Intra-chr q12.1 Oncogene Tumor suppressor gene q12.2 Seq+ 56480 ChimerSeq STARFusion TCGA_RNA-Seq SPTLC1-IARS SPTLC1 chr9 94830248 - IARS chr9 95007353 - Exonic hg19 UCS TCGA-NF-A4WX 2 10 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 56481 ChimerSeq STARFusion TCGA_RNA-Seq TBC1D1-C4orf19 TBC1D1 chr4 37979150 + C4orf19 chr4 37559649 + Exonic hg19 UCS TCGA-NF-A4WX 2 4 5'UTR-5'UTR Intra-chr p14 p14 56482 ChimerSeq STARFusion TCGA_RNA-Seq CDK16-TIMP1 CDK16 chrX 47078504 + TIMP1 chrX 47444604 + Exonic hg19 UCS TCGA-N5-A4RD 148 358 5'UTR-CDS Intra-chr p11.3 p11.3 Seq+ 56483 ChimerSeq STARFusion TCGA_RNA-Seq CDK16-TIMP1 CDK16 chrX 47078063 + TIMP1 chrX 47444604 + Exonic hg19 UCS TCGA-N5-A4RD 30 358 In-Frame Intra-chr p11.3 p11.3 Seq+ 56484 ChimerSeq STARFusion TCGA_RNA-Seq TPX2-DEFB118 TPX2 chr20 30359485 + DEFB118 chr20 29960660 + Exonic hg19 UCS TCGA-N5-A4RD 15 122 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 56485 ChimerSeq STARFusion TCGA_RNA-Seq SMG5-MEF2D SMG5 chr1 156228796 - MEF2D chr1 156438812 - Exonic hg19 UCS TCGA-N5-A4RD 6 20 Out-of-frame Intra-chr q22 q22 Transcription factor Seq+ 56486 ChimerSeq STARFusion TCGA_RNA-Seq ZNF670-SMYD3 ZNF670 chr1 247241896 - SMYD3 chr1 246518396 - Exonic hg19 UCS TCGA-N5-A4RD 3 32 Out-of-frame Intra-chr q44 Transcription factor q44 Transcription factor Seq+ 56487 ChimerSeq STARFusion TCGA_RNA-Seq ZNF670-SMYD3 ZNF670 chr1 247241896 - SMYD3 chr1 246498776 - Exonic hg19 UCS TCGA-N5-A4RD 3 32 In-Frame Intra-chr q44 Transcription factor q44 Transcription factor Seq+ 56488 ChimerSeq STARFusion TCGA_RNA-Seq PACS2-DSG2 PACS2 chr14 105818804 + DSG2 chr18 29104666 + Exonic hg19 UCS TCGA-N5-A4RD 2 22 In-Frame Inter-chr q32.33 q12.1 Seq+ 56489 ChimerSeq STARFusion TCGA_RNA-Seq UBXN1-WDR74 UBXN1 chr11 62444990 - WDR74 chr11 62607339 - Exonic hg19 UCS TCGA-N5-A4RD 2 12 CDS-5'UTR Intra-chr q12.3 q12.3 Seq+ 56490 ChimerSeq STARFusion TCGA_RNA-Seq NUMB-DNM2 NUMB chr14 73822334 - DNM2 chr19 10893636 + Exonic hg19 UCS TCGA-N5-A4RD 2 9 Out-of-frame Inter-chr q24.3 Tumor suppressor gene p13.2 Seq+ 56491 ChimerSeq STARFusion TCGA_RNA-Seq SIK3-SRSF9 SIK3 chr11 116968859 - SRSF9 chr12 120903590 - Exonic hg19 UCS TCGA-N5-A4RD 2 7 Out-of-frame Inter-chr q23.3 q24.31 Seq+ 56492 ChimerSeq STARFusion TCGA_RNA-Seq LPP-ZNRF1 LPP chr3 187943315 + ZNRF1 chr16 75127470 + Exonic hg19 UCS TCGA-N5-A4RF 12 98 5'UTR-CDS Inter-chr q27.3 Oncogene q23.1 Seq+ 56493 ChimerSeq STARFusion TCGA_RNA-Seq LPP-ZNRF1 LPP chr3 187871809 + ZNRF1 chr16 75127470 + Exonic hg19 UCS TCGA-N5-A4RF 4 98 5'UTR-CDS Inter-chr q27.3 Oncogene q23.1 Seq+ 56494 ChimerSeq STARFusion TCGA_RNA-Seq LPP-ZNRF1 LPP chr3 187926106 + ZNRF1 chr16 75127470 + Exonic hg19 UCS TCGA-N5-A4RF 3 98 5'UTR-CDS Inter-chr q27.3 Oncogene q23.1 Seq+ 56495 ChimerSeq STARFusion TCGA_RNA-Seq LPP-ZNRF1 LPP chr3 187943315 + ZNRF1 chr16 75118327 + Exonic hg19 UCS TCGA-N5-A4RF 2 98 5'UTR-CDS Inter-chr q27.3 Oncogene q23.1 Seq+ 56496 ChimerSeq STARFusion TCGA_RNA-Seq LPP-ZNRF1 LPP chr3 187871151 + ZNRF1 chr16 75127470 + Exonic hg19 UCS TCGA-N5-A4RF 2 98 5'UTR-CDS Inter-chr q27.3 Oncogene q23.1 Seq+ 56497 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-VARS2 IGH@ chr14 106791002 - VARS2 chr6 30892058 + Exonic hg19 UVM TCGA-VD-A8KM 77 1 Out-of-frame Inter-chr 32.33 56498 ChimerSeq STARFusion TCGA_RNA-Seq IGH@-VARS2 IGH@ chr14 106815719 - VARS2 chr6 30892058 + Exonic hg19 UVM TCGA-VD-A8KM 45 1 Out-of-frame Inter-chr 32.33 56499 ChimerSeq STARFusion TCGA_RNA-Seq CHSY3-HSPA8P4 CHSY3 chr5 129244053 + HSPA8P4 chr5 129476585 + Exonic hg19 UVM TCGA-VD-A8KM 4 7 Out-of-frame Intra-chr q23.3 q23.3 56500 ChimerSeq STARFusion TCGA_RNA-Seq KIF13B-FUT10 KIF13B chr8 29102863 - FUT10 chr8 33230322 - Exonic hg19 UVM TCGA-VD-A8KM 2 14 Out-of-frame Intra-chr p12 p12 Seq+ 56501 ChimerSeq STARFusion TCGA_RNA-Seq NXF1-C11orf48 NXF1 chr11 62572801 - C11orf48 chr11 62430805 - Exonic hg19 UVM TCGA-VD-AA8S 5 10 Out-of-frame Intra-chr q12.3 Seq+ 56502 ChimerSeq STARFusion TCGA_RNA-Seq MMP17-NOC4L MMP17 chr12 132313198 + NOC4L chr12 132635526 + Exonic hg19 UVM TCGA-VD-AA8S 2 1 Out-of-frame Intra-chr q24.33 q24.33 Seq+ 56503 ChimerSeq STARFusion TCGA_RNA-Seq TYRP1-MYH10 TYRP1 chr9 12709653 + MYH10 chr17 8508282 - Exonic hg19 UVM TCGA-VD-AA8P 5 1 Out-of-frame Inter-chr p23 p13.1 56504 ChimerSeq STARFusion TCGA_RNA-Seq ZNF207-SSU72 ZNF207 chr17 30677345 + SSU72 chr1 1480382 - Exonic hg19 UVM TCGA-YZ-A984 2 1 In-Frame Inter-chr q11.2 Transcription factor p36.33 56505 ChimerSeq STARFusion TCGA_RNA-Seq ZNF266-MATK ZNF266 chr19 9545474 - MATK chr19 3784031 - Exonic hg19 UVM TCGA-VD-AA8M 6 36 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.3 Seq+ 56506 ChimerSeq STARFusion TCGA_RNA-Seq ZNF266-MATK ZNF266 chr19 9544344 - MATK chr19 3784031 - Exonic hg19 UVM TCGA-VD-AA8M 5 36 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.3 Seq+ 56507 ChimerSeq STARFusion TCGA_RNA-Seq ZNF266-MATK ZNF266 chr19 9545784 - MATK chr19 3784031 - Exonic hg19 UVM TCGA-VD-AA8M 4 36 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.3 Seq+ 56508 ChimerSeq STARFusion TCGA_RNA-Seq ZNF440-ECSIT ZNF440 chr19 11925265 + ECSIT chr19 11618863 - Exonic hg19 UVM TCGA-VD-AA8M 2 3 In-Frame Intra-chr p13.2 Transcription factor p13.2 Seq+ 56509 ChimerSeq STARFusion TCGA_RNA-Seq MACROD1-PARP1 MACROD1 chr11 63918711 - PARP1 chr1 226590080 - Exonic hg19 UVM TCGA-VD-A8KO 4 4 Out-of-frame Inter-chr q13.1 q42.12 Oncogene Tumor suppressor gene Seq+ 56510 ChimerSeq STARFusion TCGA_RNA-Seq SFT2D1-FAM46A SFT2D1 chr6 166755907 - FAM46A chr6 82204830 - Exonic hg19 UVM TCGA-VD-A8KJ 275 669 CDS-3'UTR Intra-chr q27 q14.1 Seq+ 56511 ChimerSeq STARFusion TCGA_RNA-Seq STX7-LMBRD1 STX7 chr6 132824585 - LMBRD1 chr6 70386433 - Exonic hg19 UVM TCGA-VD-A8KJ 147 1079 In-Frame Intra-chr q23.2 q13 Seq+ 56512 ChimerSeq STARFusion TCGA_RNA-Seq FOXO3-ARMC2 FOXO3 chr6 108883032 + ARMC2 chr6 109215670 + Exonic hg19 UVM TCGA-VD-A8KJ 50 97 Out-of-frame Intra-chr q21 Oncogene Tumor suppressor gene Transcription factor q21 Seq+ 56513 ChimerSeq STARFusion TCGA_RNA-Seq FOXO3-ARMC2 FOXO3 chr6 108883032 + ARMC2 chr6 109220897 + Exonic hg19 UVM TCGA-VD-A8KJ 12 97 Out-of-frame Intra-chr q21 Oncogene Tumor suppressor gene Transcription factor q21 Seq+ 56514 ChimerSeq STARFusion TCGA_RNA-Seq TMEM200A-FYN TMEM200A chr6 130687669 + FYN chr6 112101838 - Exonic hg19 UVM TCGA-VD-A8KJ 17 45 5'UTR-5'UTR Intra-chr q23.1 q21 TK:Src Seq+ 56515 ChimerSeq STARFusion TCGA_RNA-Seq PHF3-QKI PHF3 chr6 64346055 + QKI chr6 163983014 + Exonic hg19 UVM TCGA-VD-A8KJ 9 25 5'UTR-CDS Intra-chr q12 q26 Seq+ 56516 ChimerSeq STARFusion TCGA_RNA-Seq FYN-CDK19 FYN chr6 112101769 - CDK19 chr6 110935869 - Exonic hg19 UVM TCGA-VD-A8KJ 10 16 5'UTR-CDS Intra-chr q21 TK:Src q21 Seq+ 56517 ChimerSeq STARFusion TCGA_RNA-Seq SLC18B1-TRMT11 SLC18B1 chr6 133118121 - TRMT11 chr6 126342306 + Exonic hg19 UVM TCGA-VD-A8KJ 5 26 Out-of-frame Intra-chr q23.2 q22.32 Seq+ 56518 ChimerSeq STARFusion TCGA_RNA-Seq MAP3K5-OSTM1 MAP3K5 chr6 137112848 - OSTM1 chr6 108385503 - Exonic hg19 UVM TCGA-VD-A8KJ 6 16 Out-of-frame Intra-chr q23.3 STE:STE11 q21 Seq+ 56519 ChimerSeq STARFusion TCGA_RNA-Seq PHF3-QKI PHF3 chr6 64356700 + QKI chr6 163983014 + Exonic hg19 UVM TCGA-VD-A8KJ 3 25 Out-of-frame Intra-chr q12 q26 Seq+ 56520 ChimerSeq STARFusion TCGA_RNA-Seq ADAT2-AIG1 ADAT2 chr6 143766065 - AIG1 chr6 143508766 + Exonic hg19 UVM TCGA-VD-A8KJ 3 14 Out-of-frame Intra-chr q24.2 q24.2 56521 ChimerSeq STARFusion TCGA_RNA-Seq ADAT2-AIG1 ADAT2 chr6 143771700 - AIG1 chr6 143508766 + Exonic hg19 UVM TCGA-VD-A8KJ 3 14 Out-of-frame Intra-chr q24.2 q24.2 56522 ChimerSeq STARFusion TCGA_RNA-Seq SAMD3-GRIK2 SAMD3 chr6 130686265 - GRIK2 chr6 102483216 + Exonic hg19 UVM TCGA-VD-A8KJ 2 8 5'UTR-CDS Intra-chr q23.1 q16.3 Seq+ 56523 ChimerSeq STARFusion TCGA_RNA-Seq CHSY3-HSPA8P4 CHSY3 chr5 129244053 + HSPA8P4 chr5 129476585 + Exonic hg19 UVM TCGA-VD-A8KJ 3 1 Out-of-frame Intra-chr q23.3 q23.3 56524 ChimerSeq STARFusion TCGA_RNA-Seq RNGTT-TBC1D32 RNGTT chr6 89388072 - TBC1D32 chr6 121642940 - Exonic hg19 UVM TCGA-VD-A8KJ 2 4 Out-of-frame Intra-chr q15 q22.31 Seq+ 56525 ChimerSeq STARFusion TCGA_RNA-Seq MMP17-NOC4L MMP17 chr12 132313198 + NOC4L chr12 132635526 + Exonic hg19 UVM TCGA-WC-A880 2 2 Out-of-frame Intra-chr q24.33 q24.33 Seq+ 56526 ChimerSeq STARFusion TCGA_RNA-Seq TAF1D-RNPC3 TAF1D chr11 93470230 - RNPC3 chr1 104097656 + Exonic hg19 UVM TCGA-WC-A881 2 0 CDS-3'UTR Inter-chr q21 p21.1 56527 ChimerSeq STARFusion TCGA_RNA-Seq FAM193A-NMU FAM193A chr4 2665015 + NMU chr4 56496627 - Exonic hg19 UVM TCGA-YZ-A983 4 13 Out-of-frame Intra-chr p16.3 q12 Seq+ 56528 ChimerSeq STARFusion TCGA_RNA-Seq OCIAD1-KIT OCIAD1 chr4 48859382 + KIT chr4 55589750 + Exonic hg19 UVM TCGA-V4-A9F7 17 51 In-Frame Intra-chr p11 q12 TK:PDGFR Oncogene Seq+ 56529 ChimerSeq STARFusion TCGA_RNA-Seq CAPN3-SSU72 CAPN3 chr15 42702193 + SSU72 chr1 1480382 - Exonic hg19 UVM TCGA-V4-A9F7 2 1 Out-of-frame Inter-chr q15.1 p36.33 Seq+ 56530 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-BCAS3 SEPT9 chr17 75398785 + BCAS3 chr17 59445688 + Exonic hg19 UVM TCGA-WC-A884 41 216 In-Frame Intra-chr q23.2 Seq+ 56531 ChimerSeq STARFusion TCGA_RNA-Seq SEPT9-BCAS3 SEPT9 chr17 75447610 + BCAS3 chr17 59445688 + Exonic hg19 UVM TCGA-WC-A884 15 216 5'UTR-CDS Intra-chr q23.2 Seq+ 56532 ChimerSeq STARFusion TCGA_RNA-Seq RFC1-SMIM14 RFC1 chr4 39367859 - SMIM14 chr4 39574083 - Exonic hg19 UVM TCGA-V4-A9EX 3 22 Out-of-frame Intra-chr p14 p14 Seq+ 56533 ChimerSeq STARFusion TCGA_RNA-Seq MMP17-NOC4L MMP17 chr12 132313198 + NOC4L chr12 132635526 + Exonic hg19 UVM TCGA-V4-A9EX 2 2 Out-of-frame Intra-chr q24.33 q24.33 Seq+ 56534 ChimerSeq STARFusion TCGA_RNA-Seq C14orf105-PTPN2 C14orf105 chr14 57942300 - PTPN2 chr18 12859253 - Exonic hg19 UVM TCGA-V4-A9EX 2 1 Out-of-frame Inter-chr q22.3 p11.21 Tumor suppressor gene 56535 ChimerSeq STARFusion TCGA_RNA-Seq CYB561A3-CXCL16 CYB561A3 chr11 61125718 - CXCL16 chr17 4637332 - Exonic hg19 UVM TCGA-VD-A8KD 3 5 Out-of-frame Inter-chr q12.2 p13.2 56536 ChimerSeq STARFusion TCGA_RNA-Seq ELFN1-MAD1L1 ELFN1 chr7 1748888 + MAD1L1 chr7 1855864 - Exonic hg19 UVM TCGA-V4-A9ES 2 1 5'UTR-CDS Intra-chr p22.3 p22.3 Tumor suppressor gene 56537 ChimerSeq STARFusion TCGA_RNA-Seq TADA2A-C17orf78 TADA2A chr17 35767040 + C17orf78 chr17 35734817 + Exonic hg19 UVM TCGA-V4-A9EW 7 9 5'UTR-CDS Intra-chr q12 Seq+ 56538 ChimerSeq STARFusion TCGA_RNA-Seq TADA2A-C17orf78 TADA2A chr17 35767040 + C17orf78 chr17 35732942 + Exonic hg19 UVM TCGA-V4-A9EW 4 9 5'UTR-5'UTR Intra-chr q12 Seq+ 56539 ChimerSeq STARFusion TCGA_RNA-Seq TADA2A-C17orf78 TADA2A chr17 35767040 + C17orf78 chr17 35736075 + Exonic hg19 UVM TCGA-V4-A9EW 2 9 5'UTR-CDS Intra-chr q12 Seq+ 56540 ChimerSeq STARFusion TCGA_RNA-Seq MLANA-KIAA2026 MLANA chr9 5910598 + KIAA2026 chr9 5910617 - Exonic hg19 UVM TCGA-V4-A9EJ 3 1 Out-of-frame Intra-chr p24.1 p24.1 56541 ChimerSeq STARFusion TCGA_RNA-Seq ABR-DDX42 ABR chr17 953290 - DDX42 chr17 61882431 + Exonic hg19 UVM TCGA-V4-A9EI 2 5 In-Frame Intra-chr p13.3 q23.3 56542 ChimerSeq STARFusion TCGA_RNA-Seq CHSY3-HSPA8P4 CHSY3 chr5 129244053 + HSPA8P4 chr5 129476585 + Exonic hg19 UVM TCGA-V4-A9EL 4 11 Out-of-frame Intra-chr q23.3 q23.3 56543 ChimerSeq STARFusion TCGA_RNA-Seq SRRM2-SRSF5 SRRM2 chr16 2818262 + SRSF5 chr14 70237184 + Exonic hg19 UVM TCGA-VD-AA8T 2 1 Out-of-frame Inter-chr p13.3 q24.1 56544 ChimerSeq STARFusion TCGA_RNA-Seq HNRNPUL2-EML3 HNRNPUL2 chr11 62484461 - EML3 chr11 62379068 - Exonic hg19 UVM TCGA-WC-A885 3 36 In-Frame Intra-chr q12.3 q12.3 Seq+ 56545 ChimerSeq STARFusion TCGA_RNA-Seq KLK2-FGFR2 KLK2 chr19 51376775 + FGFR2 chr10 123310973 - Exonic hg19 UVM TCGA-V4-A9EA 2 10 In-Frame Inter-chr q13.33 q26.13 TK:FGFR Oncogene KB Pub Seq+ 56546 ChimerSeq STARFusion TCGA_RNA-Seq TBCD-CSNK1D TBCD chr17 80710253 + CSNK1D chr17 80223672 - Exonic hg19 UVM TCGA-V4-A9EA 2 1 In-Frame Intra-chr q25.3 Seq+ 56547 ChimerSeq STARFusion TCGA_RNA-Seq CHSY3-HSPA8P4 CHSY3 chr5 129244053 + HSPA8P4 chr5 129476585 + Exonic hg19 UVM TCGA-V4-A9ED 3 2 Out-of-frame Intra-chr q23.3 q23.3 56548 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq A2LD1-DCLK1 A2LD1 chr13 101236079 - DCLK1 chr13 36348836 - Exonic hg19 PRAD TCGA-G9-6348-01A 2 1 5'UTR-CDS Intra-chr q13.3 CAMK:DCAMKL 56549 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq A2LD1-INCA1 A2LD1 chr13 101236079 - INCA1 chr17 4893560 - Exonic hg19 SARC TCGA-DX-A48L-01A 10 2 5'UTR-CDS Inter-chr p13.2 56550 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq A2M-ARFGEF2 A2M chr12 9220308 - ARFGEF2 chr20 47615777 + Exonic hg19 LUAD TCGA-97-7941-01A 2 7 Out-of-frame Inter-chr p13.31 q13.13 56551 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq A2M-CCT5 A2M chr12 9220308 - CCT5 chr5 10250033 + Exonic hg19 LIHC TCGA-DD-A39W-01A 2 2 Out-of-frame Inter-chr p13.31 p15.2 56552 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq A2M-FAR1 A2M chr12 9220308 - FAR1 chr11 13744912 + Exonic hg19 KIRC TCGA-B4-5378-01A 2 1 Out-of-frame Inter-chr p13.31 p15.3 56553 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AACS-MAL AACS chr12 125561157 - MAL chr2 95713704 + Exonic hg19 UCEC TCGA-AX-A1C7-01A 30 33 Out-of-frame Inter-chr q24.31 q11.1 Tumor suppressor gene Seq+ 56554 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AAGAB-SMAD3 AAGAB chr15 67500900 - SMAD3 chr15 67457233 + Exonic hg19 SARC TCGA-K1-A42X-01A 11 4 Out-of-frame Intra-chr q23 q22.33 Transcription factor Seq+ 56555 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AAGAB-SMAD3 AAGAB chr15 67500900 - SMAD3 chr15 67457233 + Exonic hg19 SARC TCGA-K1-A42X-02A 5 8 Out-of-frame Intra-chr q23 q22.33 Transcription factor Seq+ 56556 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AAK1-C2orf42 AAK1 chr2 69783992 - C2orf42 chr2 70377696 - Exonic hg19 OV TCGA-24-1423-01A 50 46 Out-of-frame Intra-chr p13.3 Other:NAK p13.3 Seq+ 56557 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AAK1-KCMF1 AAK1 chr2 69870010 - KCMF1 chr2 85255012 + Exonic hg19 PRAD TCGA-HC-7744-01A 14 11 In-Frame Intra-chr p13.3 Other:NAK p11.2 Transcription factor Seq+ 56558 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AAK1-LHX2 AAK1 chr2 69783992 - LHX2 chr9 126776240 + Exonic hg19 UCS TCGA-N5-A59F-01A 5 2 In-Frame Inter-chr p13.3 Other:NAK q33.3 Transcription factor 56559 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AAK1-RPIA AAK1 chr2 69783992 - RPIA chr2 89028796 + Exonic hg19 LIHC TCGA-DD-A3A5-01A 6 1 In-Frame Intra-chr p13.3 Other:NAK p11.2 Seq+ 56560 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AAK1-WFDC13 AAK1 chr2 69732701 - WFDC13 chr20 44333083 + Exonic hg19 LUSC TCGA-22-A5C4-01A 37 37 In-Frame Inter-chr p13.3 Other:NAK q13.12 Seq+ 56561 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AAMP-MARCH4 AAMP chr2 219134105 - 2019_ 3_ 4_ chr2 217124402 - Exonic hg19 LUSC TCGA-21-1083-01A 18 5 Out-of-frame Intra-chr q35 q35 Seq+ 56562 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AARS-COG4 AARS chr16 70316523 - COG4 chr16 70553634 - Exonic hg19 BRCA TCGA-BH-A0B9-01A 84 115 In-Frame Intra-chr q22.1 q22.1 Seq+ 56563 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AARS-PPP1R13B AARS chr16 70292883 - PPP1R13B chr14 104209160 - Exonic hg19 UCEC TCGA-B5-A3S1-01A 3 2 Out-of-frame Inter-chr q22.1 q32.33 Seq+ 56564 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AARS-ST3GAL2 AARS chr16 70303521 - ST3GAL2 chr16 70415765 - Exonic hg19 BRCA TCGA-BH-A0B9-01A 72 45 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 56565 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AARS2-SPATS1 AARS2 chr6 44278731 - SPATS1 chr6 44328183 + Exonic hg19 ACC TCGA-OR-A5J8-01A 802 388 In-Frame Intra-chr p21.1 p21.1 Seq+ 56566 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AARSD1-CCR7 AARSD1 chr17 41113209 - CCR7 chr17 38715194 - Exonic hg19 PRAD TCGA-HC-7209-01A 23 5 In-Frame Intra-chr q21.31 q21.2 Seq+ 56567 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AARSD1-CHRNB1 AARSD1 chr17 41116123 - CHRNB1 chr17 7357616 + Exonic hg19 UCS TCGA-N6-A4VF-01A 8 3 Out-of-frame Intra-chr q21.31 56568 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AARSD1-FBXL20 AARSD1 chr17 41108221 - FBXL20 chr17 37499494 - Exonic hg19 BLCA TCGA-BT-A2LA-01A 2 2 In-Frame Intra-chr q21.31 q12 56569 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AARSD1-RGS9 AARSD1 chr17 41131187 - RGS9 chr17 63206606 + Exonic hg19 CESC TCGA-4J-AA1J-01A 12 3 Out-of-frame Intra-chr q21.31 q24.1 Seq+ 56570 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AASDH-CC2D2A AASDH chr4 57244314 - CC2D2A chr4 15564978 + Exonic hg19 KIRC TCGA-CW-5581-01A 10 9 In-Frame Intra-chr q12 p15.32 Seq+ 56571 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AASDH-LRRC66 AASDH chr4 57217508 - LRRC66 chr4 52869558 - Exonic hg19 GBM TCGA-06-2559-01A 5 20 Out-of-frame Intra-chr q12 q12 Seq+ 56572 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AASDHPPT-ABTB2 AASDHPPT chr11 105950419 - ABTB2 chr11 34226237 - Exonic hg19 LIHC TCGA-DD-A4NN-01A 6 2 In-Frame Intra-chr q22.3 p13 Seq+ 56573 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AASS-CADPS2 AASS chr7 121726066 - CADPS2 chr7 122377122 - Exonic hg19 LUSC TCGA-94-7557-01A 2 1 In-Frame Intra-chr q31.32 q31.32 56574 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AASS-DNM3 AASS chr7 121731757 - DNM3 chr1 172100315 + Exonic hg19 SARC TCGA-DX-A6BH-01A 44 32 In-Frame Inter-chr q31.32 q24.3 Seq+ 56575 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AATF-AP2B1 AATF chr17 35311207 - AP2B1 chr17 34037253 + Exonic hg19 SARC TCGA-DX-A8BG-01A 27 24 In-Frame Intra-chr q12 Seq+ 56576 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AATF-FTL AATF chr17 35378313 - FTL chr19 49468566 + Exonic hg19 LUSC TCGA-O2-A52S-01A 5 5 CDS-5'UTR Inter-chr q13.33 Seq+ 56577 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AATF-GOSR2 AATF chr17 35348156 - GOSR2 chr17 45015965 + Exonic hg19 BRCA TCGA-BH-A0HF-01A 3 9 In-Frame Intra-chr q21.32 56578 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AATF-LIG3 AATF chr17 35348156 - LIG3 chr17 33325623 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 12 4 In-Frame Intra-chr q12 Tumor suppressor gene Seq+ 56579 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABAT-C16orf62 ABAT chr16 8768568 - C16orf62 chr16 19663298 + Exonic hg19 BRCA TCGA-AR-A0TX-01A 67 20 5'UTR-CDS Intra-chr p13.2 p12.3 Seq+ 56580 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABAT-KIAA0430 ABAT chr16 8768568 - KIAA0430 chr16 15706634 - Exonic hg19 LGG TCGA-CS-5397-01A 9 3 5'UTR-CDS Intra-chr p13.2 Seq+ 56581 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCA1-HDHD3 ABCA1 chr9 107690216 - HDHD3 chr9 116137847 - Exonic hg19 BRCA TCGA-EW-A3U0-01A 3 3 5'UTR-5'UTR Intra-chr q31.1 q32 Seq+ 56582 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCA1-PTGR1 ABCA1 chr9 107665895 - PTGR1 chr9 114359712 - Exonic hg19 CESC TCGA-ZJ-A8QO-01A 22 9 CDS-5'UTR Intra-chr q31.1 q31.3 Seq+ 56583 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCA1-ZBTB26 ABCA1 chr9 107645320 - ZBTB26 chr9 125682223 - Exonic hg19 LUSC TCGA-39-5028-01A 2 1 CDS-5'UTR Intra-chr q31.1 q33.2 Transcription factor 56584 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCA1-ZBTB6 ABCA1 chr9 107645320 - ZBTB6 chr9 125674360 - Exonic hg19 LUSC TCGA-39-5028-01A 6 5 CDS-5'UTR Intra-chr q31.1 q33.2 Transcription factor Seq+ 56585 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCA1-ZNF483 ABCA1 chr9 107645320 - ZNF483 chr9 114338645 + Exonic hg19 SKCM TCGA-BF-AAP6-01A 47 33 In-Frame Intra-chr q31.1 q31.3 Transcription factor Seq+ 56586 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCA12-MICU1 ABCA12 chr2 216002863 - MICU1 chr10 74326552 - Exonic hg19 CESC TCGA-LP-A4AU-01A 2 1 CDS-5'UTR Inter-chr q35 q22.1 56587 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCA12-SGPP2 ABCA12 chr2 215890397 - SGPP2 chr2 223339287 + Exonic hg19 ESCA TCGA-VR-A8EU-01A 4 19 In-Frame Intra-chr q35 q36.1 Seq+ 56588 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCA2-TRIM14 ABCA2 chr9 139922527 - TRIM14 chr9 100862446 - Exonic hg19 LGG TCGA-E1-5304-01A 25 19 In-Frame Intra-chr q34.3 q22.33 Seq+ 56589 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCA3-XRCC6BP1 ABCA3 chr16 2358451 - XRCC6BP1 chr12 58340778 + Exonic hg19 LGG TCGA-TM-A84I-01A 2 2 3'UTR-CDS Inter-chr p13.3 56590 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCA5-BCAS3 ABCA5 chr17 67323193 - BCAS3 chr17 58786580 + Exonic hg19 BRCA TCGA-A2-A3XZ-01A 4 7 5'UTR-CDS Intra-chr q24.3 q23.2 Seq+ 56591 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCA5-C17orf67 ABCA5 chr17 67280094 - C17orf67 chr17 54872541 - Exonic hg19 LUSC TCGA-6A-AB49-01A 44 31 Out-of-frame Intra-chr q24.3 q22 Seq+ 56592 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCA5-MBTD1 ABCA5 chr17 67290796 - MBTD1 chr17 49258055 - Exonic hg19 CESC TCGA-VS-A8QC-01A 5 6 In-Frame Intra-chr q24.3 q21.33 Seq+ 56593 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCA7-COL5A3 ABCA7 chr19 1059084 - COL5A3 chr19 10114821 - Exonic hg19 KIRP TCGA-B9-A44B-01A 46 9 In-Frame Intra-chr p13.3 p13.2 Seq+ 56594 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCA9-CEP112 ABCA9 chr17 67020355 - CEP112 chr17 63685336 - Exonic hg19 SARC TCGA-DX-A3M1-01A 2 10 Out-of-frame Intra-chr q24.2 q24.1 Seq+ 56595 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCA9-TANC2 ABCA9 chr17 66978703 - TANC2 chr17 61345109 + Exonic hg19 SARC TCGA-FX-A2QS-01A 15 11 In-Frame Intra-chr q24.2 q23.2 Seq+ 56596 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCB4-TMEM169 ABCB4 chr7 87076350 - TMEM169 chr2 216946870 + Exonic hg19 LIHC TCGA-BC-A10T-01A 25 17 CDS-5'UTR Inter-chr q21.12 q35 Seq+ 56597 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCB8-NOS3 ABCB8 chr7 150725697 - NOS3 chr7 150706018 + Exonic hg19 BRCA TCGA-AC-A3TN-01A 26 7 Out-of-frame Intra-chr q36.1 q36.1 Seq+ 56598 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCB8-NOS3 ABCB8 chr7 150725697 - NOS3 chr7 150706018 + Exonic hg19 LUAD TCGA-MP-A4TA-01A 72 27 Out-of-frame Intra-chr q36.1 q36.1 Seq+ 56599 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCB9-EIF2B1 ABCB9 chr12 123428938 - EIF2B1 chr12 124107308 - Exonic hg19 BRCA TCGA-A7-A13D-01A 10 6 In-Frame Intra-chr q24.31 q24.31 Seq+ 56600 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCB9-MPHOSPH9 ABCB9 chr12 123450834 - MPHOSPH9 chr12 123651336 - Exonic hg19 HNSC TCGA-CR-6482-01A 3 3 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 56601 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCC1-NDE1 ABCC1 chr16 16110478 - NDE1 chr16 15758593 + Exonic hg19 CESC TCGA-VS-A8EC-01A 3 2 CDS-5'UTR Intra-chr p13.11 Seq+ 56602 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCC1-PRKCB ABCC1 chr16 16184445 - PRKCB chr16 23999829 + Exonic hg19 PRAD TCGA-KK-A8I7-01A 3 4 In-Frame Intra-chr p12.2 Tumor suppressor gene 56603 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCC10-PPP2R5D ABCC10 chr6 43401098 - PPP2R5D chr6 42974201 + Exonic hg19 BRCA TCGA-GM-A2DD-01A 2 1 In-Frame Intra-chr p21.1 p21.1 Seq+ 56604 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCC2-C3orf78 ABCC2 chr10 101567986 - C3orf78 chr3 52574440 + Exonic hg19 LIHC TCGA-BC-A10T-01A 158 166 Out-of-frame Inter-chr q24.2 56605 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCC2-CTNNA3 ABCC2 chr10 101544538 - CTNNA3 chr10 67680375 - Exonic hg19 LIHC TCGA-DD-AAEA-01A 243 294 In-Frame Intra-chr q24.2 q21.3 Tumor suppressor gene Seq+ 56606 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCC3-AC217773.1 ABCC3 chr17 48736729 - AC217773.1 chr17 44273734 + Exonic hg19 BRCA TCGA-B6-A0IK-01A 2 1 Out-of-frame Intra-chr q21.33 56607 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCC3-ACSF2 ABCC3 chr17 48712342 - ACSF2 chr17 48548389 + Exonic hg19 STAD TCGA-BR-8590-01A 8 16 In-Frame Intra-chr q21.33 q21.33 Seq+ 56608 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCC3-BCAN ABCC3 chr17 48751019 - BCAN chr1 156627467 + Exonic hg19 KIRC TCGA-CW-5584-01A 8 9 In-Frame Inter-chr q21.33 q23.1 Seq+ 56609 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCC3-XYLT2 ABCC3 chr17 48755580 - XYLT2 chr17 48435568 + Exonic hg19 STAD TCGA-HU-A4GH-01A 3 55 In-Frame Intra-chr q21.33 q21.33 Seq+ 56610 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCC4-ABCB4 ABCC4 chr13 95829961 - ABCB4 chr7 87038708 - Exonic hg19 HNSC TCGA-CR-6467-01A 42 26 In-Frame Inter-chr q32.1 q21.12 Seq+ 56611 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCC4-CCDC169 ABCC4 chr13 95838955 - CCDC169 chr13 36801518 - Exonic hg19 PRAD TCGA-VP-A876-01A 4 4 Out-of-frame Intra-chr q32.1 q13.3 Seq+ 56612 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCC4-COL4A2 ABCC4 chr13 95822786 - COL4A2 chr13 111077081 + Exonic hg19 LUAD TCGA-69-7979-01A 31 23 In-Frame Intra-chr q32.1 q34 Seq+ 56613 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCC4-PTPN4 ABCC4 chr13 95953495 - PTPN4 chr2 120690000 + Exonic hg19 SKCM TCGA-DA-A1HW-06A 7 4 In-Frame Inter-chr q32.1 q14.2 Seq+ 56614 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCC4-UGGT2 ABCC4 chr13 95813443 - UGGT2 chr13 96454066 - Exonic hg19 BLCA TCGA-4Z-AA7R-01A 16 9 In-Frame Intra-chr q32.1 q32.1 Seq+ 56615 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCC4-UGGT2 ABCC4 chr13 95953495 - UGGT2 chr13 96489456 - Exonic hg19 UCS TCGA-N8-A56S-01A 15 2 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 56616 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCC5-SPRR4 ABCC5 chr3 183645118 - SPRR4 chr1 152944347 + Exonic hg19 SKCM TCGA-FS-A1ZQ-06A 10 5 CDS-5'UTR Inter-chr q27.1 q21.3 Seq+ 56617 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCC6-C16orf70 ABCC6 chr16 16253339 - C16orf70 chr16 67165189 + Exonic hg19 LAML TCGA-AB-2846-03A 2 1 3'UTR-CDS Intra-chr q22.1 56618 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCD3-AK5 ABCD3 chr1 94965170 - AK5 chr1 77876666 + Exonic hg19 LUSC TCGA-66-2756-01A 2 1 In-Frame Intra-chr p21.3 p31.1 56619 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCD3-ARHGAP29 ABCD3 chr1 94884144 - ARHGAP29 chr1 94685948 - Exonic hg19 BLCA TCGA-GV-A3QH-01A 15 7 Out-of-frame Intra-chr p21.3 p22.1 Tumor suppressor gene Seq+ 56620 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCD3-DPYD ABCD3 chr1 94956803 - DPYD chr1 97981497 - Exonic hg19 PRAD TCGA-CH-5764-01A 10 6 In-Frame Intra-chr p21.3 p21.3 Oncogene Seq+ 56621 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCF1-PRR3 ABCF1 chr6 30539337 - PRR3 chr6 30529611 + Exonic hg19 PAAD TCGA-IB-7652-01A 7 7 In-Frame Intra-chr Seq+ 56622 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCF1-SHC2 ABCF1 chr6 30554488 - SHC2 chr19 440932 - Exonic hg19 LGG TCGA-TM-A7CF-01A 4 3 In-Frame Inter-chr p13.3 Seq+ 56623 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCF2-WDR86 ABCF2 chr7 150911965 - WDR86 chr7 151093282 - Exonic hg19 SARC TCGA-DX-A1KY-01A 26 14 Out-of-frame Intra-chr q36.1 q36.1 Seq+ 56624 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCF3-PLEKHB2 ABCF3 chr3 183911793 - PLEKHB2 chr2 131876464 + Exonic hg19 PRAD TCGA-G9-6342-01A 2 3 Out-of-frame Inter-chr q27.1 q21.1 56625 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCG1-BACE2 ABCG1 chr21 43708422 - BACE2 chr21 42598193 + Exonic hg19 UCEC TCGA-B5-A3FB-01A 28 6 In-Frame Intra-chr q22.3 q22.2 Seq+ 56626 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCG1-BTG3 ABCG1 chr21 43646024 - BTG3 chr21 18981470 - Exonic hg19 PAAD TCGA-3E-AAAY-01A 5 1 CDS-5'UTR Intra-chr q22.3 Tumor suppressor gene Seq+ 56627 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCG1-CCDC134 ABCG1 chr21 43714770 - CCDC134 chr22 42204879 + Exonic hg19 LUSC TCGA-43-5670-01A 4 9 CDS-5'UTR Inter-chr q22.3 q13.2 Seq+ 56628 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABCG1-MEI1 ABCG1 chr21 43714770 - MEI1 chr22 42195258 + Exonic hg19 LUSC TCGA-43-5670-01A 2 3 In-Frame Inter-chr q22.3 q13.2 Seq+ 56629 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABHD12-ENTPD6 ABHD12 chr20 25371149 - ENTPD6 chr20 25203474 + Exonic hg19 LUSC TCGA-85-7696-01A 2 5 Out-of-frame Intra-chr p11.21 p11.21 Seq+ 56630 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABHD12-GINS1 ABHD12 chr20 25371149 - GINS1 chr20 25422338 + Exonic hg19 COAD TCGA-AA-3660-01A 5 1 Out-of-frame Intra-chr p11.21 p11.21 56631 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABHD12-KIF16B ABHD12 chr20 25282855 - KIF16B chr20 16509085 - Exonic hg19 LUSC TCGA-77-7142-01A 6 6 In-Frame Intra-chr p11.21 p12.1 56632 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABHD12-PPP2R2A ABHD12 chr20 25295561 - PPP2R2A chr8 26196406 + Exonic hg19 COAD TCGA-CM-5860-01A 29 20 In-Frame Inter-chr p11.21 p21.2 Seq+ 56633 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABHD12-TTI1 ABHD12 chr20 25371149 - TTI1 chr20 36642259 - Exonic hg19 CESC TCGA-C5-A1MK-01A 3 2 CDS-5'UTR Intra-chr p11.21 q11.23 56634 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABHD12-UQCC ABHD12 chr20 25371149 - UQCC chr20 33981999 - Exonic hg19 CESC TCGA-C5-A1MK-01A 2 1 Out-of-frame Intra-chr p11.21 56635 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABHD14B-POC1A ABHD14B chr3 52005476 - POC1A chr3 52110001 - Exonic hg19 BRCA TCGA-BH-A1F0-01A 6 2 Out-of-frame Intra-chr p21.2 p21.2 Seq+ 56636 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABHD16A-LY6G6F ABHD16A chr6 31668719 - LY6G6F chr6 31675235 + Exonic hg19 LUSC TCGA-NC-A5HK-01A 11 4 In-Frame Intra-chr p21.33 Seq+ 56637 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABHD16A-VARS ABHD16A chr6 31664725 - VARS chr6 31760897 - Exonic hg19 LIHC TCGA-BC-A3KG-01A 61 22 In-Frame Intra-chr Seq+ 56638 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABHD16A-VARS ABHD16A chr6 31668719 - VARS chr6 31763027 - Exonic hg19 BLCA TCGA-ZF-AA58-01A 6 7 CDS-5'UTR Intra-chr Seq+ 56639 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABHD2-ACAN ABHD2 chr15 89698765 - ACAN chr15 89398083 + Exonic hg19 BRCA TCGA-AC-A8OQ-01A 3 7 In-Frame Intra-chr q26.1 q26.1 Seq+ 56640 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABHD2-BIRC6 ABHD2 chr15 89745591 - BIRC6 chr2 32820101 + Exonic hg19 BLCA TCGA-GV-A3QI-01A 2 3 3'UTR-CDS Inter-chr q26.1 p22.3 56641 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABHD3-ANKRD29 ABHD3 chr18 19244079 - ANKRD29 chr18 21214113 - Exonic hg19 ESCA TCGA-L5-A893-01A 2 8 Out-of-frame Intra-chr q11.2 q11.2 56642 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABHD6-FLNB ABHD6 chr3 58242432 - FLNB chr3 58104599 + Exonic hg19 KIRC TCGA-AS-3777-01A 5 2 Out-of-frame Intra-chr p14.3 p14.3 Seq+ 56643 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABHD6-FLNB ABHD6 chr3 58242432 - FLNB chr3 58104599 + Exonic hg19 LIHC TCGA-DD-A115-01A 7 11 Out-of-frame Intra-chr p14.3 p14.3 Seq+ 56644 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABHD6-FLNB ABHD6 chr3 58223643 - FLNB chr3 58104599 + Exonic hg19 LIHC TCGA-ED-A7XO-01A 6 7 5'UTR-CDS Intra-chr p14.3 p14.3 Seq+ 56645 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABHD8-ILKAP ABHD8 chr19 17411665 - ILKAP chr2 239079665 - Exonic hg19 BLCA TCGA-DK-AA6U-01A 13 10 In-Frame Inter-chr p13.11 q37.3 Seq+ 56646 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABI1-CUBN ABI1 chr10 27149676 - CUBN chr10 17032514 - Exonic hg19 SKCM TCGA-EB-A82C-01A 50 19 CDS-5'UTR Intra-chr p12.1 p13 Seq+ 56647 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABI1-PTP4A3 ABI1 chr10 27112067 - PTP4A3 chr8 142431488 + Exonic hg19 LGG TCGA-TQ-A7RV-01A 11 5 CDS-5'UTR Inter-chr p12.1 q24.3 Seq+ 56648 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABI1-PTP4A3 ABI1 chr10 27112067 - PTP4A3 chr8 142431488 + Exonic hg19 LGG TCGA-TQ-A7RV-02A 11 8 CDS-5'UTR Inter-chr p12.1 q24.3 Seq+ 56649 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABI2-CHMP1A ABI2 chr2 204291992 - CHMP1A chr16 89713739 - Exonic hg19 PCPG TCGA-S7-A7WO-01A 2 1 Out-of-frame Inter-chr q33.2 Tumor suppressor gene q24.3 56650 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABI2-HEXIM2 ABI2 chr2 204231767 - HEXIM2 chr17 43240117 + Exonic hg19 LGG TCGA-QH-A6CV-01A 9 3 CDS-5'UTR Inter-chr q33.2 Tumor suppressor gene q21.31 Seq+ 56651 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABL1-ADAMTSL2 ABL1 chr9 133589842 - ADAMTSL2 chr9 136405720 + Exonic hg19 BRCA TCGA-D8-A1J9-01A 12 7 In-Frame Intra-chr q34.12 TK:Abl Oncogene q34.2 Seq+ 56652 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABL1-BCR ABL1 chr9 133589842 - BCR chr22 23595986 + Exonic hg19 LAML TCGA-AB-2817-03A 6 3 In-Frame Inter-chr q34.12 TK:Abl Oncogene q11.23 Atypical:BCR Oncogene Tumor suppressor gene Seq+ 56653 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABL1-BCR ABL1 chr9 133589842 - BCR chr22 23634728 + Exonic hg19 LAML TCGA-AB-2901-03A 8 8 In-Frame Inter-chr q34.12 TK:Abl Oncogene q11.23 Atypical:BCR Oncogene Tumor suppressor gene Seq+ 56654 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABL1-BCR ABL1 chr9 133589842 - BCR chr22 23634728 + Exonic hg19 LAML TCGA-AB-2941-03A 9 8 In-Frame Inter-chr q34.12 TK:Abl Oncogene q11.23 Atypical:BCR Oncogene Tumor suppressor gene Seq+ 56655 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABL1-CCBL1 ABL1 chr9 133589842 - CCBL1 chr9 131607690 - Exonic hg19 LUSC TCGA-66-2755-01A 3 4 5'UTR-5'UTR Intra-chr q34.12 TK:Abl Oncogene Seq+ 56656 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABL1-DDX27 ABL1 chr9 133763062 - DDX27 chr20 47849303 + Exonic hg19 BLCA TCGA-DK-A3IL-01A 2 1 Out-of-frame Inter-chr q34.12 TK:Abl Oncogene q13.13 56657 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABL1-EXOSC2 ABL1 chr9 133589842 - EXOSC2 chr9 133570879 + Exonic hg19 HNSC TCGA-CV-6950-01A 8 7 Out-of-frame Intra-chr q34.12 TK:Abl Oncogene q34.12 Seq+ 56658 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABL1-FUBP3 ABL1 chr9 133589842 - FUBP3 chr9 133493184 + Exonic hg19 LIHC TCGA-ZS-A9CF-01A 8 6 Out-of-frame Intra-chr q34.12 TK:Abl Oncogene q34.11 Seq+ 56659 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABL1-FUBP3 ABL1 chr9 133589842 - FUBP3 chr9 133493184 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 20 8 Out-of-frame Intra-chr q34.12 TK:Abl Oncogene q34.11 Seq+ 56660 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABL1-PRDM12 ABL1 chr9 133589842 - PRDM12 chr9 133553916 + Exonic hg19 LIHC TCGA-CC-5263-01A 18 18 Out-of-frame Intra-chr q34.12 TK:Abl Oncogene q34.12 Transcription factor Seq+ 56661 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABL1-PTPRN2 ABL1 chr9 133589842 - PTPRN2 chr7 157475629 - Exonic hg19 SARC TCGA-DX-A6Z0-01A 2 1 Out-of-frame Inter-chr q34.12 TK:Abl Oncogene q36.3 56662 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABL1-SLC38A10 ABL1 chr9 133730483 - SLC38A10 chr17 79246427 - Exonic hg19 PRAD TCGA-ZG-A9LN-01A 2 3 In-Frame Inter-chr q34.12 TK:Abl Oncogene q25.3 56663 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABL2-XRRA1 ABL2 chr1 179198376 - XRRA1 chr11 74559507 - Exonic hg19 BLCA TCGA-K4-A4AC-01A 3 1 Out-of-frame Inter-chr q25.2 TK:Abl Oncogene q13.4 56664 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABLIM1-PDE6B ABLIM1 chr10 116286419 - PDE6B chr4 628466 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 22 6 5'UTR-CDS Inter-chr q25.3 p16.3 Seq+ 56665 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABLIM1-PTCD2 ABLIM1 chr10 116203788 - PTCD2 chr5 71630845 + Exonic hg19 BRCA TCGA-AO-A12G-01A 2 1 Out-of-frame Inter-chr q25.3 q13.2 56666 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABLIM2-PPP2R2C ABLIM2 chr4 8079355 - PPP2R2C chr4 6382821 - Exonic hg19 BLCA TCGA-FD-A3B4-01A 3 2 Out-of-frame Intra-chr p16.1 p16.1 Tumor suppressor gene Seq+ 56667 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABLIM3-TRPM8 ABLIM3 chr5 148521671 - TRPM8 chr2 234835178 + Exonic hg19 CESC TCGA-HM-A3JJ-01A 5 1 CDS-5'UTR Inter-chr q32 q37.1 Seq+ 56668 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABR-BAI1 ABR chr17 953290 - BAI1 chr8 143599499 + Exonic hg19 STAD TCGA-VQ-A8DZ-01A 3 24 In-Frame Inter-chr p13.3 Seq+ 56669 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABR-CRK ABR chr17 994905 - CRK chr17 1340449 - Exonic hg19 LUAD TCGA-44-7662-01A 4 4 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 56670 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABR-GAS7 ABR chr17 1082961 - GAS7 chr17 9923214 - Exonic hg19 LUSC TCGA-66-2769-01A 10 10 Out-of-frame Intra-chr p13.3 p13.1 Seq+ 56671 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABR-KIAA0664 ABR chr17 953290 - KIAA0664 chr17 2607858 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 9 1 CDS-5'UTR Intra-chr p13.3 56672 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABR-MAN2B1 ABR chr17 994905 - MAN2B1 chr19 12776619 - Exonic hg19 LGG TCGA-DU-6402-01A 37 23 In-Frame Inter-chr p13.3 p13.13 Seq+ 56673 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABR-PITPNA ABR chr17 953290 - PITPNA chr17 1444934 - Exonic hg19 TGCT TCGA-2G-AAH4-01A 13 12 In-Frame Intra-chr p13.3 p13.3 Seq+ 56674 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABR-PITPNA ABR chr17 973209 - PITPNA chr17 1446321 - Exonic hg19 BRCA TCGA-BH-A0AV-01A 6 4 3'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 56675 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABR-RTN4RL1 ABR chr17 970317 - RTN4RL1 chr17 1841102 - Exonic hg19 BLCA TCGA-GU-A42P-01A 3 2 Out-of-frame Intra-chr p13.3 p13.3 56676 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABR-YWHAE ABR chr17 982570 - YWHAE chr17 1268352 - Exonic hg19 LGG TCGA-HT-7693-01A 58 75 In-Frame Intra-chr p13.3 p13.3 Seq+ 56677 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABTB2-APIP ABTB2 chr11 34186233 - APIP chr11 34916657 - Exonic hg19 BRCA TCGA-AR-A256-01A 2 5 Out-of-frame Intra-chr p13 p13 Seq+ 56678 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABTB2-APIP ABTB2 chr11 34378248 - APIP chr11 34916657 - Exonic hg19 STAD TCGA-CG-4449-01A 2 6 Out-of-frame Intra-chr p13 p13 Seq+ 56679 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ABTB2-ATXN3 ABTB2 chr11 34378248 - ATXN3 chr14 92563182 - Exonic hg19 BRCA TCGA-AN-A0XU-01A 2 6 Out-of-frame Inter-chr p13 q32.12 Seq+ 56680 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC002094.1-C5orf25 AC002094.1 chr17 26694297 - C5orf25 chr5 175721968 + Exonic hg19 LIHC TCGA-DD-AADL-01A 2 1 Out-of-frame Inter-chr q11.2 56681 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC002094.1-CCT5 AC002094.1 chr17 26694297 - CCT5 chr5 10250033 + Exonic hg19 LIHC TCGA-G3-A5SM-01A 2 3 Out-of-frame Inter-chr q11.2 p15.2 56682 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC002094.1-MYH9 AC002094.1 chr17 26696703 - MYH9 chr22 36685232 - Exonic hg19 LIHC TCGA-DD-A11A-01A 3 2 Out-of-frame Inter-chr q11.2 q12.3 Oncogene Tumor suppressor gene 56683 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC002094.1-SIAE AC002094.1 chr17 26694297 - SIAE chr11 124543777 - Exonic hg19 LIHC TCGA-FV-A3R3-01A 3 4 Out-of-frame Inter-chr q11.2 q24.2 56684 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC002094.1-TYK2 AC002094.1 chr17 26694297 - TYK2 chr19 10491352 - Exonic hg19 LIHC TCGA-DD-A4NN-01A 2 2 Out-of-frame Inter-chr q11.2 p13.2 TK:JakA 56685 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC002094.1-UTRN AC002094.1 chr17 26694297 - UTRN chr6 144665237 + Exonic hg19 LIHC TCGA-BC-A10Y-01A 4 2 Out-of-frame Inter-chr q11.2 q24.2 56686 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC003682.1-CXCL17 AC003682.1 chr19 58063995 - CXCL17 chr19 42938008 - Exonic hg19 GBM TCGA-32-1970-01A 59 158 Out-of-frame Intra-chr q13.43 q13.2 56687 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC004410.1-DOT1L AC004410.1 chr19 2339207 - DOT1L chr19 2225387 + Exonic hg19 PRAD TCGA-V1-A9OX-01A 2 1 Out-of-frame Intra-chr p13.3 Oncogene Transcription factor 56688 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC005522.1-POR AC005522.1 chr7 76093026 - POR chr7 75583307 + Exonic hg19 PRAD TCGA-ZG-A9KY-01A 4 60 Out-of-frame Intra-chr q11.23 q11.23 56689 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC005522.1-ZP3 AC005522.1 chr7 76093026 - ZP3 chr7 76054369 + Exonic hg19 HNSC TCGA-BB-A5HY-01A 30 149 Out-of-frame Intra-chr q11.23 q11.23 56690 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC006465.3-C1GALT1 AC006465.3 chr7 7841374 - C1GALT1 chr7 7277886 + Exonic hg19 LUAD TCGA-78-7152-01A 2 1 Out-of-frame Intra-chr p22.1 56691 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC006465.3-C6orf174 AC006465.3 chr7 7713084 - C6orf174 chr6 127804129 - Exonic hg19 SKCM TCGA-EE-A181-06A 4 2 Out-of-frame Inter-chr 56692 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC006465.3-MIOS AC006465.3 chr7 7841374 - MIOS chr7 7645573 + Exonic hg19 PAAD TCGA-IB-7654-01A 4 3 Out-of-frame Intra-chr p21.3 56693 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC006465.3-MRAP AC006465.3 chr7 7713084 - MRAP chr21 33678951 + Exonic hg19 BRCA TCGA-E9-A295-01A 9 13 Out-of-frame Inter-chr q22.11 56694 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC007182.1-BATF AC007182.1 chr14 76045984 - BATF chr14 76012805 + Exonic hg19 ACC TCGA-OR-A5J7-01A 249 57 Out-of-frame Intra-chr q24.3 q24.3 Transcription factor 56695 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC007182.1-JDP2 AC007182.1 chr14 76101356 - JDP2 chr14 75935993 + Exonic hg19 LIHC TCGA-4R-AA8I-01A 15 3 Out-of-frame Intra-chr q24.3 q24.3 Tumor suppressor gene Transcription factor 56696 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC008073.6-SNTG2 AC008073.6 chr2 24358057 - SNTG2 chr2 1312266 + Exonic hg19 SKCM TCGA-D3-A3CF-06A 10 14 Out-of-frame Intra-chr 56697 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC008073.6-UBXN2A AC008073.6 chr2 24369956 - UBXN2A chr2 24181171 + Exonic hg19 BLCA TCGA-XF-AAN5-01A 2 2 Out-of-frame Intra-chr p23.3 56698 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC008537.4-ITPKC AC008537.4 chr19 41448111 - ITPKC chr19 41242891 + Exonic hg19 BRCA TCGA-AR-A0TT-01A 3 1 Out-of-frame Intra-chr q13.2 q13.2 56699 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC008687.1-MN1 AC008687.1 chr19 49568208 - MN1 chr22 28147084 - Exonic hg19 ACC TCGA-PK-A5H9-01A 2 2 Out-of-frame Inter-chr q13.33 q12.1 Oncogene 56700 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC008745.1-EHD2 AC008745.1 chr19 48282071 - EHD2 chr19 48244138 + Exonic hg19 HNSC TCGA-BA-6872-01A 65 28 Out-of-frame Intra-chr q13.33 q13.33 56701 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC008745.1-EHD2 AC008745.1 chr19 48282071 - EHD2 chr19 48219815 + Exonic hg19 HNSC TCGA-CV-6953-01A 19 7 Out-of-frame Intra-chr q13.33 q13.33 56702 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC009403.2-GIMAP8 AC009403.2 chr7 155436162 - GIMAP8 chr7 150163759 + Exonic hg19 LGG TCGA-DB-A75O-01A 5 4 Out-of-frame Intra-chr q36.3 q36.1 56703 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC010859.1-COL14A1 AC010859.1 chr8 97657630 - COL14A1 chr8 121379410 + Exonic hg19 LUSC TCGA-18-3421-01A 2 2 Out-of-frame Intra-chr q24.12 56704 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC010859.1-CORO1C AC010859.1 chr8 97657630 - CORO1C chr12 109095099 - Exonic hg19 SARC TCGA-3B-A9HO-01A 6 1 Out-of-frame Inter-chr q24.11 56705 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC010859.1-KSR2 AC010859.1 chr8 97657630 - KSR2 chr12 118298236 - Exonic hg19 SARC TCGA-3B-A9HO-01A 6 5 Out-of-frame Inter-chr q24.23 TKL:RAF 56706 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC010859.1-MATN2 AC010859.1 chr8 97797558 - MATN2 chr8 98943181 + Exonic hg19 SARC TCGA-DX-A3M1-01A 41 26 Out-of-frame Intra-chr q22.1 56707 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC010859.1-OC90 AC010859.1 chr8 97657630 - OC90 chr8 133067320 - Exonic hg19 BRCA TCGA-C8-A12Z-01A 5 4 Out-of-frame Intra-chr q24.22 56708 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC011333.1-PSAP AC011333.1 chr5 173473165 - PSAP chr10 73581764 - Exonic hg19 PCPG TCGA-SQ-A6I4-01A 2 37 Out-of-frame Inter-chr q35.2 q22.1 56709 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC011357.1-CCT3 AC011357.1 chr5 146017814 - CCT3 chr1 156294880 - Exonic hg19 GBM TCGA-41-4097-01A 9 35 Out-of-frame Inter-chr q22 56710 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC011357.1-DPYSL3 AC011357.1 chr5 146257565 - DPYSL3 chr5 146804526 - Exonic hg19 LGG TCGA-VW-A8FI-01A 37 14 Out-of-frame Intra-chr q32 56711 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC011443.1-ACTN4 AC011443.1 chr19 39576030 - ACTN4 chr19 39195574 + Exonic hg19 ESCA TCGA-L5-A8NI-01A 31 257 Out-of-frame Intra-chr q13.2 56712 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC011443.1-SOX5 AC011443.1 chr19 39592177 - SOX5 chr12 23915531 - Exonic hg19 OV TCGA-24-1470-01A 3 1 Out-of-frame Inter-chr q13.2 p12.1 Transcription factor 56713 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC011450.1-GLIS3 AC011450.1 chr19 49835311 - GLIS3 chr9 3829492 - Exonic hg19 BRCA TCGA-EW-A6S9-01A 17 2 Out-of-frame Inter-chr q13.33 p24.2 Transcription factor 56714 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC011498.1-CHAF1A AC011498.1 chr19 4488873 - CHAF1A chr19 4442242 + Exonic hg19 CESC TCGA-HM-A6W2-06A 61 60 Out-of-frame Intra-chr p13.3 p13.3 56715 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC011498.1-CHAF1A AC011498.1 chr19 4475580 - CHAF1A chr19 4442242 + Exonic hg19 BLCA TCGA-ZF-A9R5-01A 50 28 Out-of-frame Intra-chr p13.3 p13.3 56716 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC011498.1-STAP2 AC011498.1 chr19 4475580 - STAP2 chr19 4334041 - Exonic hg19 DLBC TCGA-GS-A9TY-01A 7 7 Out-of-frame Intra-chr p13.3 p13.3 56717 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC012100.1-FAM81A AC012100.1 chr15 51057665 - FAM81A chr15 59784470 + Exonic hg19 SARC TCGA-DX-A8BM-01A 25 7 Out-of-frame Intra-chr q21.2 q22.2 56718 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC012652.1-ARHGAP42 AC012652.1 chr15 41523647 - ARHGAP42 chr11 100830614 + Exonic hg19 UCEC TCGA-AJ-A3I9-01A 6 4 Out-of-frame Inter-chr q22.1 56719 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC013461.1-RAPGEF4 AC013461.1 chr2 173955918 - RAPGEF4 chr2 173825488 + Exonic hg19 LUAD TCGA-44-4112-01A 2 2 Out-of-frame Intra-chr q31.1 56720 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC013461.1-RAPGEF4 AC013461.1 chr2 173955918 - RAPGEF4 chr2 173855538 + Exonic hg19 LUSC TCGA-77-8140-01A 8 2 Out-of-frame Intra-chr q31.1 56721 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC013461.1-RAPGEF4 AC013461.1 chr2 173955918 - RAPGEF4 chr2 173659753 + Exonic hg19 LIHC TCGA-BC-A10T-01A 2 6 Out-of-frame Intra-chr q31.1 56722 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC013461.1-RAPGEF4 AC013461.1 chr2 173955918 - RAPGEF4 chr2 173825488 + Exonic hg19 BRCA TCGA-D8-A140-01A 5 2 Out-of-frame Intra-chr q31.1 56723 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC013461.1-RAPGEF4 AC013461.1 chr2 173955918 - RAPGEF4 chr2 173898642 + Exonic hg19 LIHC TCGA-GJ-A6C0-01A 28 11 Out-of-frame Intra-chr q31.1 56724 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC020907.3-LGI4 AC020907.3 chr19 35597133 - LGI4 chr19 35622946 - Exonic hg19 SKCM TCGA-D9-A1JX-06A 6 12 Out-of-frame Intra-chr q13.11 q13.12 56725 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC020907.3-LGI4 AC020907.3 chr19 35597133 - LGI4 chr19 35622946 - Exonic hg19 SKCM TCGA-D9-A3Z4-01A 2 3 Out-of-frame Intra-chr q13.11 q13.12 56726 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC020907.3-LGI4 AC020907.3 chr19 35597133 - LGI4 chr19 35622946 - Exonic hg19 SKCM TCGA-EE-A2MK-06A 11 19 Out-of-frame Intra-chr q13.11 q13.12 56727 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC020907.3-LGI4 AC020907.3 chr19 35597133 - LGI4 chr19 35622946 - Exonic hg19 SKCM TCGA-FS-A1YX-06A 2 5 Out-of-frame Intra-chr q13.11 q13.12 56728 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC020907.3-LGI4 AC020907.3 chr19 35597133 - LGI4 chr19 35622946 - Exonic hg19 SKCM TCGA-FS-A1Z4-06A 2 2 Out-of-frame Intra-chr q13.11 q13.12 56729 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC020907.3-LGI4 AC020907.3 chr19 35597133 - LGI4 chr19 35622946 - Exonic hg19 SKCM TCGA-LH-A9QB-06A 3 3 Out-of-frame Intra-chr q13.11 q13.12 56730 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC020907.3-LGI4 AC020907.3 chr19 35597133 - LGI4 chr19 35622946 - Exonic hg19 SKCM TCGA-YD-A9TB-06A 3 2 Out-of-frame Intra-chr q13.11 q13.12 56731 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC022415.5-KEAP1 AC022415.5 chr19 12267371 - KEAP1 chr19 10610756 - Exonic hg19 GBM TCGA-19-1787-01B 3 7 Out-of-frame Intra-chr p13.2 Oncogene 56732 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC024575.1-C19orf80 AC024575.1 chr19 11468415 - C19orf80 chr19 11352336 + Exonic hg19 TGCT TCGA-2G-AAKH-01A 3 1 Out-of-frame Intra-chr p13.2 56733 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC024575.1-CCDC159 AC024575.1 chr19 11472164 - CCDC159 chr19 11465256 + Exonic hg19 BLCA TCGA-4Z-AA84-01A 8 3 Out-of-frame Intra-chr p13.2 p13.2 56734 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC037459.4-SORBS3 AC037459.4 chr8 22451345 - SORBS3 chr8 22411965 + Exonic hg19 ESCA TCGA-L5-A8NE-01A 3 11 Out-of-frame Intra-chr p21.3 p21.3 56735 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC040934.1-ARHGAP23 AC040934.1 chr17 45534050 - ARHGAP23 chr17 36614346 + Exonic hg19 BRCA TCGA-EW-A1J1-01A 3 1 Out-of-frame Intra-chr q21.32 q12 56736 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC040980.1-CYP2J2 AC040980.1 chr17 73975592 - CYP2J2 chr1 60381772 - Exonic hg19 SARC TCGA-DX-AB3A-01A 29 25 Out-of-frame Inter-chr p32.1 56737 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC040980.1-KIAA0195 AC040980.1 chr17 73975592 - KIAA0195 chr17 73467881 + Exonic hg19 LUAD TCGA-44-2668-01A 6 2 Out-of-frame Intra-chr 56738 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC069214.1-ACADS AC069214.1 chr12 121341648 - ACADS chr12 121164829 + Exonic hg19 LUSC TCGA-85-8479-01A 22 25 Out-of-frame Intra-chr q24.31 56739 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC069214.1-KRR1 AC069214.1 chr12 121341648 - KRR1 chr12 75902226 - Exonic hg19 SARC TCGA-DX-A23Y-01A 10 6 Out-of-frame Intra-chr q21.2 56740 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC069214.1-PFDN6 AC069214.1 chr12 121341648 - PFDN6 chr6 33257547 + Exonic hg19 PCPG TCGA-QT-A5XJ-01A 2 3 Out-of-frame Inter-chr 56741 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC069214.1-UNC119B AC069214.1 chr12 121341648 - UNC119B chr12 121157723 + Exonic hg19 LUSC TCGA-85-8479-01A 9 8 Out-of-frame Intra-chr q24.31 56742 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC069214.1-USP25 AC069214.1 chr12 121339681 - USP25 chr21 17177440 + Exonic hg19 LIHC TCGA-2Y-A9H8-01A 2 1 Out-of-frame Inter-chr q21.1 56743 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC069368.3-TRIP4 AC069368.3 chr15 65153774 - TRIP4 chr15 64737205 + Exonic hg19 LGG TCGA-TM-A84B-01A 14 2 Out-of-frame Intra-chr q22.31 56744 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC069368.3-ZNF609 AC069368.3 chr15 65140941 - ZNF609 chr15 64915026 + Exonic hg19 BRCA TCGA-A7-A13D-01B 2 1 Out-of-frame Intra-chr q22.31 Transcription factor 56745 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC073995.2-CCDC138 AC073995.2 chr2 96643870 - CCDC138 chr2 109489907 + Exonic hg19 STAD TCGA-BR-4366-01A 4 2 Out-of-frame Intra-chr q13 56746 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC087465.1-ANGPT1 AC087465.1 chr15 77544709 - ANGPT1 chr8 108359325 - Exonic hg19 UCEC TCGA-AJ-A3IA-01A 7 12 Out-of-frame Inter-chr q24.3 q23.1 56747 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC087465.1-NRG4 AC087465.1 chr15 77544709 - NRG4 chr15 76235995 - Exonic hg19 SKCM TCGA-FW-A3I3-06A 42 19 Out-of-frame Intra-chr q24.3 q24.2 56748 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC087465.1-PSTPIP1 AC087465.1 chr15 77471132 - PSTPIP1 chr15 77317625 + Exonic hg19 SKCM TCGA-DA-A3F5-06A 41 15 Out-of-frame Intra-chr q24.3 q24.3 56749 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC090098.1-TRPM1 AC090098.1 chr15 33445249 - TRPM1 chr15 31353717 - Exonic hg19 SKCM TCGA-D9-A1JX-06A 17 2 Out-of-frame Intra-chr q13.3 56750 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC091153.1-CHRNE AC091153.1 chr17 4579652 - CHRNE chr17 4806058 - Exonic hg19 LUSC TCGA-60-2719-01A 9 2 Out-of-frame Intra-chr p13.2 p13.2 56751 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC091153.1-YBX2 AC091153.1 chr17 4607158 - YBX2 chr17 7193854 - Exonic hg19 PRAD TCGA-ZG-A9LN-01A 2 3 Out-of-frame Intra-chr p13.2 p13.1 Transcription factor 56752 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC093799.1-ANKIB1 AC093799.1 chr7 98030114 - ANKIB1 chr7 91924203 + Exonic hg19 LUSC TCGA-56-A4BW-01A 10 24 Out-of-frame Intra-chr q22.1 q21.2 56753 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC093799.1-ANKIB1 AC093799.1 chr7 97933508 - ANKIB1 chr7 91924203 + Exonic hg19 ESCA TCGA-L5-A8NF-01A 8 31 Out-of-frame Intra-chr q22.1 q21.2 56754 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC093799.1-DMTF1 AC093799.1 chr7 98030114 - DMTF1 chr7 86800311 + Exonic hg19 COAD TCGA-A6-5667-01A 11 13 Out-of-frame Intra-chr q22.1 q21.12 Tumor suppressor gene Transcription factor 56755 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC093799.1-LRRC23 AC093799.1 chr7 97984354 - LRRC23 chr12 6992868 + Exonic hg19 LUAD TCGA-55-7815-01A 5 2 Out-of-frame Inter-chr q22.1 p13.31 56756 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC103810.1-STXBP4 AC103810.1 chr17 62833174 - STXBP4 chr17 53078169 + Exonic hg19 BRCA TCGA-EW-A6SD-01A 2 2 Out-of-frame Intra-chr q24.1 q22 56757 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC110285.1-BAIAP2 AC110285.1 chr17 79373717 - BAIAP2 chr17 79027468 + Exonic hg19 BRCA TCGA-D8-A27E-01A 5 7 Out-of-frame Intra-chr q25.3 q25.3 56758 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC110285.1-BAIAP2 AC110285.1 chr17 79373717 - BAIAP2 chr17 79031681 + Exonic hg19 LGG TCGA-HT-7855-01A 2 4 Out-of-frame Intra-chr q25.3 q25.3 56759 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC110491.1-ARL6 AC110491.1 chr3 97583491 - ARL6 chr3 97503799 + Exonic hg19 BRCA TCGA-A2-A0YT-01A 7 3 Out-of-frame Intra-chr q11.2 q11.2 56760 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC113191.1-ANK1 AC113191.1 chr8 42958973 - ANK1 chr8 41591587 - Exonic hg19 HNSC TCGA-UF-A7JK-01A 24 12 Out-of-frame Intra-chr p11.21 p11.21 56761 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC113191.1-C21orf56 AC113191.1 chr8 42958973 - C21orf56 chr21 47588572 - Exonic hg19 SKCM TCGA-EE-A2GH-06A 2 2 Out-of-frame Inter-chr p11.21 56762 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC113191.1-CHRNA6 AC113191.1 chr8 42958973 - CHRNA6 chr8 42620347 - Exonic hg19 COAD TCGA-AZ-6606-01A 24 24 Out-of-frame Intra-chr p11.21 p11.21 56763 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC113191.1-LSS AC113191.1 chr8 42958973 - LSS chr21 47616181 - Exonic hg19 SKCM TCGA-EE-A2GH-06A 8 4 Out-of-frame Inter-chr p11.21 q22.3 56764 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC113191.1-NKAIN3 AC113191.1 chr8 42958973 - NKAIN3 chr8 63492098 + Exonic hg19 BRCA TCGA-BH-A18T-01A 15 3 Out-of-frame Intra-chr p11.21 q12.3 56765 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC113191.1-ST6GAL1 AC113191.1 chr8 42958973 - ST6GAL1 chr3 186681573 + Exonic hg19 LUSC TCGA-63-A5MV-01A 6 8 Out-of-frame Inter-chr p11.21 q27.3 56766 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC135352.1-GATA4 AC135352.1 chr8 12848509 - GATA4 chr8 11606425 + Exonic hg19 LUSC TCGA-43-6143-01A 25 6 Out-of-frame Intra-chr p22 p23.1 Tumor suppressor gene Transcription factor 56767 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AC135352.2-GATA4 AC135352.2 chr8 12848540 - GATA4 chr8 11606428 + Exonic hg19 LUSC TCGA-43-6143-01A 26 15 Out-of-frame Intra-chr p23.1 Tumor suppressor gene Transcription factor 56768 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACAA2-MYO5B ACAA2 chr18 47339839 - MYO5B chr18 47380017 - Exonic hg19 ESCA TCGA-VR-AA4D-01A 2 15 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 56769 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACACA-ACCN1 ACACA chr17 35614625 - ACCN1 chr17 31344702 - Exonic hg19 BRCA TCGA-E9-A22D-01A 9 13 Out-of-frame Intra-chr 56770 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACACA-ADAM9 ACACA chr17 35687113 - ADAM9 chr8 38865405 + Exonic hg19 BLCA TCGA-FJ-A3ZE-01A 5 3 Out-of-frame Inter-chr Seq+ 56771 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACACA-C12orf26 ACACA chr17 35715942 - C12orf26 chr12 82871060 + Exonic hg19 SARC TCGA-3B-A9HS-01A 48 38 5'UTR-CDS Inter-chr 56772 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACACA-C20orf72 ACACA chr17 35766352 - C20orf72 chr20 17968809 + Exonic hg19 THCA TCGA-EM-A1YC-01A 3 1 In-Frame Inter-chr 56773 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACACA-GLIPR1L2 ACACA chr17 35687113 - GLIPR1L2 chr12 75816684 + Exonic hg19 SARC TCGA-3B-A9HS-01A 222 139 In-Frame Inter-chr q21.2 Seq+ 56774 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACACA-GSDMB ACACA chr17 35627642 - GSDMB chr17 38068750 - Exonic hg19 COAD TCGA-D5-6929-01A 11 2 Out-of-frame Intra-chr q21.1 Seq+ 56775 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACACA-HTRA4 ACACA chr17 35687113 - HTRA4 chr8 38845455 + Exonic hg19 BLCA TCGA-FJ-A3ZE-01A 133 135 In-Frame Inter-chr p11.22 Seq+ 56776 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACACA-LASP1 ACACA chr17 35536201 - LASP1 chr17 37034339 + Exonic hg19 ESCA TCGA-L5-A4OQ-01A 14 89 In-Frame Intra-chr q12 Seq+ 56777 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACACA-MED1 ACACA chr17 35766352 - MED1 chr17 37588269 - Exonic hg19 READ TCGA-AG-3902-01A 6 2 In-Frame Intra-chr q12 Tumor suppressor gene Seq+ 56778 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACACA-MMP28 ACACA chr17 35454765 - MMP28 chr17 34106327 - Exonic hg19 PRAD TCGA-V1-A8ML-01A 18 18 In-Frame Intra-chr q12 Seq+ 56779 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACACA-RARA ACACA chr17 35687113 - RARA chr17 38487109 + Exonic hg19 STAD TCGA-BR-8483-01A 365 1404 CDS-5'UTR Intra-chr q21.2 Oncogene Transcription factor Seq+ 56780 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACACA-SRCIN1 ACACA chr17 35468466 - SRCIN1 chr17 36735044 - Exonic hg19 LUAD TCGA-69-7979-01A 3 5 In-Frame Intra-chr q12 56781 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACACA-SSH2 ACACA chr17 35631084 - SSH2 chr17 27982625 - Exonic hg19 LUAD TCGA-44-2656-01A 2 1 In-Frame Intra-chr q11.2 Seq+ 56782 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACACA-TADA2A ACACA chr17 35766352 - TADA2A chr17 35783609 + Exonic hg19 BLCA TCGA-DK-A2I2-01A 6 7 Out-of-frame Intra-chr q12 Seq+ 56783 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACACA-TANC2 ACACA chr17 35454765 - TANC2 chr17 61345109 + Exonic hg19 BRCA TCGA-3C-AALI-01A 2 2 Out-of-frame Intra-chr q23.2 56784 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACACB-MARCH9 ACACB chr12 109675185 - 2019_ 3_ 9_ chr12 58150712 + Exonic hg19 SARC TCGA-3B-A9HS-01A 14 12 Out-of-frame Intra-chr q24.11 q14.1 Seq+ 56785 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACACB-UNG ACACB chr12 109665294 - UNG chr12 109547634 + Exonic hg19 BRCA TCGA-AN-A0XP-01A 2 4 3'UTR-CDS Intra-chr q24.11 q24.11 Seq+ 56786 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACACB-UNG ACACB chr12 109665294 - UNG chr12 109547634 + Exonic hg19 SKCM TCGA-BF-AAP6-01A 14 25 3'UTR-CDS Intra-chr q24.11 q24.11 Seq+ 56787 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACACB-UNG ACACB chr12 109665294 - UNG chr12 109547634 + Exonic hg19 COAD TCGA-D5-5537-01A 4 2 3'UTR-CDS Intra-chr q24.11 q24.11 Seq+ 56788 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACACB-UNG ACACB chr12 109665294 - UNG chr12 109547634 + Exonic hg19 SKCM TCGA-EB-A44O-01A 45 31 3'UTR-CDS Intra-chr q24.11 q24.11 Seq+ 56789 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACACB-UNG ACACB chr12 109665294 - UNG chr12 109547634 + Exonic hg19 READ TCGA-EF-5830-01A 11 7 3'UTR-CDS Intra-chr q24.11 q24.11 Seq+ 56790 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACACB-UNG ACACB chr12 109665294 - UNG chr12 109547634 + Exonic hg19 SKCM TCGA-FS-A1YY-06A 23 12 3'UTR-CDS Intra-chr q24.11 q24.11 Seq+ 56791 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACAD11-ABCE1 ACAD11 chr3 132360816 - ABCE1 chr4 146025538 + Exonic hg19 SARC TCGA-DX-A3UA-01A 18 12 CDS-5'UTR Inter-chr q22.1 q31.21 Seq+ 56792 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACAD9-KIAA1257 ACAD9 chr3 128598684 - KIAA1257 chr3 128707761 - Exonic hg19 LGG TCGA-DB-5275-01A 3 6 Out-of-frame Intra-chr q21.3 q21.3 56793 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACADVL-CD74 ACADVL chr17 7120492 - CD74 chr5 149792314 - Exonic hg19 CESC TCGA-EA-A3HU-01A 2 1 Out-of-frame Inter-chr p13.1 q33.1 56794 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACAP2-APOD ACAP2 chr3 195101738 - APOD chr3 195300842 - Exonic hg19 OV TCGA-24-2262-01A 4 16 In-Frame Intra-chr q29 q29 Seq+ 56795 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACAP2-DLG1 ACAP2 chr3 195112819 - DLG1 chr3 196778539 - Exonic hg19 LIHC TCGA-EP-A2KA-01A 3 3 Out-of-frame Intra-chr q29 q29 Tumor suppressor gene Seq+ 56796 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACAP2-IQCG ACAP2 chr3 195163524 - IQCG chr3 197640913 - Exonic hg19 HNSC TCGA-CV-5970-01A 16 5 Out-of-frame Intra-chr q29 q29 Seq+ 56797 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACAP2-UBE2J2 ACAP2 chr3 195101738 - UBE2J2 chr1 1203372 - Exonic hg19 UCEC TCGA-EY-A3QX-01A 5 4 CDS-5'UTR Inter-chr q29 p36.33 Seq+ 56798 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACAP3-CPSF3L ACAP3 chr1 1243149 - CPSF3L chr1 1250342 - Exonic hg19 OV TCGA-13-1512-01A 2 10 In-Frame Intra-chr p36.33 Seq+ 56799 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACAP3-CPSF3L ACAP3 chr1 1231805 - CPSF3L chr1 1250818 - Exonic hg19 LUSC TCGA-21-1076-01A 10 2 Out-of-frame Intra-chr p36.33 Seq+ 56800 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACAP3-DVL1 ACAP3 chr1 1243149 - DVL1 chr1 1278138 - Exonic hg19 LUSC TCGA-96-A4JK-01A 7 3 In-Frame Intra-chr p36.33 p36.33 Seq+ 56801 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACBD6-CCDC122 ACBD6 chr1 180283827 - CCDC122 chr13 44411565 - Exonic hg19 SARC TCGA-IS-A3K6-01A 6 2 Out-of-frame Inter-chr q25.3 q14.11 Seq+ 56802 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACBD6-IVNS1ABP ACBD6 chr1 180366651 - IVNS1ABP chr1 185274775 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 19 14 In-Frame Intra-chr q25.3 q25.3 Seq+ 56803 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACBD6-PGBD2 ACBD6 chr1 180366651 - PGBD2 chr1 249208015 + Exonic hg19 BRCA TCGA-AC-A3QQ-01A 8 7 CDS-5'UTR Intra-chr q25.3 q44 Seq+ 56804 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACE2-GPR143 ACE2 chrX 15596212 - GPR143 chrX 9693880 - Exonic hg19 COAD TCGA-AZ-6605-01A 112 47 In-Frame Intra-chr p22.2 p22.2 Seq+ 56805 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACER2-C8orf37 ACER2 chr9 19435082 - C8orf37 chr8 96276002 - Exonic hg19 PRAD TCGA-EJ-A7NF-01A 3 1 In-Frame Inter-chr p22.1 q22.1 Seq+ 56806 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACER3-C11orf30 ACER3 chr11 76572123 - C11orf30 chr11 76248839 + Exonic hg19 STAD TCGA-BR-4366-01A 3 8 In-Frame Intra-chr q13.5 Seq+ 56807 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACER3-NARS2 ACER3 chr11 76572123 - NARS2 chr11 78180359 - Exonic hg19 BRCA TCGA-AN-A0G0-01A 192 172 Out-of-frame Intra-chr q13.5 q14.1 Seq+ 56808 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACER3-NRL ACER3 chr11 76572123 - NRL chr14 24552084 - Exonic hg19 BRCA TCGA-A2-A0EQ-01A 18 4 CDS-5'UTR Inter-chr q13.5 q12 Transcription factor Seq+ 56809 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACER3-PPME1 ACER3 chr11 76670075 - PPME1 chr11 73933357 + Exonic hg19 LUAD TCGA-05-5425-01A 9 5 In-Frame Intra-chr q13.5 q13.4 Seq+ 56810 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACER3-THRSP ACER3 chr11 76572123 - THRSP chr11 77778705 + Exonic hg19 BRCA TCGA-A1-A0SM-01A 10 9 CDS-3'UTR Intra-chr q13.5 q14.1 Seq+ 56811 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACER3-UVRAG ACER3 chr11 76730820 - UVRAG chr11 75826968 + Exonic hg19 BRCA TCGA-E2-A109-01A 17 24 In-Frame Intra-chr q13.5 q13.5 Tumor suppressor gene Seq+ 56812 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACIN1-KIAA1598 ACIN1 chr14 23559731 - KIAA1598 chr10 118700123 - Exonic hg19 LUSC TCGA-O2-A52V-01A 12 4 Out-of-frame Inter-chr q11.2 Seq+ 56813 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACLY-DNAJC7 ACLY chr17 40054884 - DNAJC7 chr17 40129341 - Exonic hg19 BRCA TCGA-D8-A1JM-01A 4 6 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 56814 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACLY-DNAJC7 ACLY chr17 40057949 - DNAJC7 chr17 40129341 - Exonic hg19 BRCA TCGA-LL-A6FR-01A 219 394 In-Frame Intra-chr q21.2 q21.2 Seq+ 56815 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACLY-NEUROD2 ACLY chr17 40039375 - NEUROD2 chr17 37762857 - Exonic hg19 ESCA TCGA-VR-AA4D-01A 14 46 CDS-5'UTR Intra-chr q21.2 q12 Transcription factor Seq+ 56816 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACLY-TAF15 ACLY chr17 40054002 - TAF15 chr17 34163136 + Exonic hg19 SARC TCGA-WK-A8Y0-01A 366 157 In-Frame Intra-chr q21.2 q12 Seq+ 56817 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACLY-WEE1 ACLY chr17 40030064 - WEE1 chr11 9609996 + Exonic hg19 ESCA TCGA-L5-A4OS-01A 10 42 In-Frame Inter-chr q21.2 p15.4 Seq+ 56818 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACO1-TYRP1 ACO1 chr9 32384733 - TYRP1 chr9 12693912 + Exonic hg19 BRCA TCGA-OL-A5RY-01A 9 14 5'UTR-5'UTR Intra-chr p21.1 p23 Seq+ 56819 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACO2-AHRR ACO2 chr22 41865186 - AHRR chr5 422844 + Exonic hg19 SKCM TCGA-EB-A5KH-06A 2 11 5'UTR-CDS Inter-chr q13.2 p15.33 Tumor suppressor gene Transcription factor Seq+ 56820 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACO2-ARHGAP8 ACO2 chr22 41895866 - ARHGAP8 chr22 45110471 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 27 4 Out-of-frame Intra-chr q13.2 q13.31 Seq+ 56821 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACO2-C22orf25 ACO2 chr22 41865186 - C22orf25 chr22 20024283 + Exonic hg19 SKCM TCGA-BF-A5EQ-01A 7 9 5'UTR-5'UTR Intra-chr q13.2 56822 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACO2-PRR5 ACO2 chr22 41895866 - PRR5 chr22 45098372 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 27 10 5'UTR-5'UTR Intra-chr q13.2 q13.31 Tumor suppressor gene Seq+ 56823 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACO2-RASGEF1C ACO2 chr22 41865186 - RASGEF1C chr5 179565058 - Exonic hg19 SKCM TCGA-XV-AAZY-01A 3 6 5'UTR-5'UTR Inter-chr q13.2 q35.3 Seq+ 56824 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACO2-TEF ACO2 chr22 41865186 - TEF chr22 41783355 + Exonic hg19 BRCA TCGA-BH-A18T-01A 4 6 5'UTR-CDS Intra-chr q13.2 q13.2 Transcription factor Seq+ 56825 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACO2-ZC3H7B ACO2 chr22 41865186 - ZC3H7B chr22 41737092 + Exonic hg19 LUSC TCGA-56-A4BX-01A 4 8 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 56826 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACO2-ZC3H7B ACO2 chr22 41865186 - ZC3H7B chr22 41751473 + Exonic hg19 BRCA TCGA-D8-A1X5-01A 7 9 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 56827 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACOT11-C8B ACOT11 chr1 55051577 - C8B chr1 57417853 - Exonic hg19 BRCA TCGA-E9-A1R7-01A 9 11 In-Frame Intra-chr p32.3 p32.2 Seq+ 56828 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACOT12-SSBP2 ACOT12 chr5 80631587 - SSBP2 chr5 80785128 - Exonic hg19 LIHC TCGA-ZS-A9CF-01A 2 2 Out-of-frame Intra-chr q14.1 q14.1 Tumor suppressor gene Seq+ 56829 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACOT2-ZNF320 ACOT2 chr14 74036100 - ZNF320 chr19 53385236 - Exonic hg19 SARC TCGA-DX-A6YT-01A 2 1 In-Frame Inter-chr q24.3 q13.41 Transcription factor Seq+ 56830 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACOT7-DNAJC11 ACOT7 chr1 6341162 - DNAJC11 chr1 6727870 - Exonic hg19 UCS TCGA-N8-A56S-01A 19 10 In-Frame Intra-chr p36.31 p36.31 Tumor suppressor gene Seq+ 56831 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACOT7-FUCA1 ACOT7 chr1 6341162 - FUCA1 chr1 24181050 - Exonic hg19 BRCA TCGA-D8-A1XZ-01A 26 15 In-Frame Intra-chr p36.31 p36.11 Seq+ 56832 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACOT7-KLHL21 ACOT7 chr1 6378552 - KLHL21 chr1 6655617 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 2 5 Out-of-frame Intra-chr p36.31 p36.31 Seq+ 56833 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACOT7-MIB2 ACOT7 chr1 6378552 - MIB2 chr1 1560666 + Exonic hg19 CESC TCGA-C5-A8YQ-01A 17 12 In-Frame Intra-chr p36.31 p36.33 Seq+ 56834 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACOT7-NSMCE2 ACOT7 chr1 6453317 - NSMCE2 chr8 126379010 + Exonic hg19 BRCA TCGA-A2-A0T1-01A 57 42 In-Frame Inter-chr p36.31 q24.13 Seq+ 56835 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACOT7-PLEKHG5 ACOT7 chr1 6341162 - PLEKHG5 chr1 6556629 - Exonic hg19 ESCA TCGA-L5-A4OS-01A 3 20 Out-of-frame Intra-chr p36.31 p36.31 Oncogene Seq+ 56836 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACOT7-TTC34 ACOT7 chr1 6453317 - TTC34 chr1 2577002 - Exonic hg19 BRCA TCGA-A2-A04W-01A 6 7 Out-of-frame Intra-chr p36.31 Seq+ 56837 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23739998 - APOO chrX 23899069 - Exonic hg19 LUSC TCGA-43-A56U-01A 17 9 In-Frame Intra-chr p22.11 p22.11 Seq+ 56838 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23739998 - APOO chrX 23899069 - Exonic hg19 LUSC TCGA-98-A53A-01A 9 1 In-Frame Intra-chr p22.11 p22.11 Seq+ 56839 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23748644 - APOO chrX 23851729 - Exonic hg19 BRCA TCGA-A7-A13D-01B 102 126 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 56840 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23739998 - APOO chrX 23899069 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 10 10 In-Frame Intra-chr p22.11 p22.11 Seq+ 56841 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACOX1-SRP68 ACOX1 chr17 73969706 - SRP68 chr17 74066525 - Exonic hg19 LUAD TCGA-78-7155-01A 7 3 In-Frame Intra-chr q25.1 q25.1 Seq+ 56842 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACOX1-SRP68 ACOX1 chr17 73951647 - SRP68 chr17 74060252 - Exonic hg19 UCEC TCGA-B5-A3FB-01A 6 3 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 56843 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACOX1-SRP68 ACOX1 chr17 73974615 - SRP68 chr17 74063411 - Exonic hg19 BLCA TCGA-DK-A3IT-01A 7 5 In-Frame Intra-chr q25.1 q25.1 Seq+ 56844 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACOX1-SRP68 ACOX1 chr17 73949532 - SRP68 chr17 74046607 - Exonic hg19 BLCA TCGA-E7-A5KE-01A 14 8 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 56845 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACOX3-STAT1 ACOX3 chr4 8442375 - STAT1 chr2 191863034 - Exonic hg19 MESO TCGA-TS-A7P8-01A 13 6 5'UTR-CDS Inter-chr p16.1 q32.2 Tumor suppressor gene Transcription factor Seq+ 56846 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACOXL-UNC5D ACOXL chr2 111850543 - UNC5D chr8 35406810 + Exonic hg19 BLCA TCGA-FD-A3SJ-01A 5 5 Out-of-frame Inter-chr q13 p12 Tumor suppressor gene Seq+ 56847 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACP2-CD74 ACP2 chr11 47261044 - CD74 chr5 149792295 - Exonic hg19 CESC TCGA-IR-A3LH-01A 2 1 Out-of-frame Inter-chr p11.2 q33.1 56848 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACP2-MRPL48 ACP2 chr11 47266856 - MRPL48 chr11 73555852 + Exonic hg19 UCEC TCGA-AP-A5FX-01A 20 14 In-Frame Intra-chr p11.2 q13.4 Seq+ 56849 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACP5-GTF2F1 ACP5 chr19 11688408 - GTF2F1 chr19 6389648 - Exonic hg19 SKCM TCGA-EB-A550-01A 37 28 5'UTR-CDS Intra-chr p13.2 p13.3 Seq+ 56850 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACP6-INTS7 ACP6 chr1 147120048 - INTS7 chr1 212190365 - Exonic hg19 PRAD TCGA-2A-AAYU-01A 4 2 Out-of-frame Intra-chr q21.2 q32.3 Seq+ 56851 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACP6-PIAS3 ACP6 chr1 147141952 - PIAS3 chr1 145578062 + Exonic hg19 SARC TCGA-DX-AB3A-01A 4 6 In-Frame Intra-chr q21.2 q21.1 Seq+ 56852 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACPP-ATP2C1 ACPP chr3 132036420 - ATP2C1 chr3 130649260 + Exonic hg19 PRAD TCGA-V1-A9O9-01A 185 160 In-Frame Intra-chr q22.1 q22.1 Seq+ 56853 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACPP-OGT ACPP chr3 132077596 - OGT chrX 70782980 + Exonic hg19 PRAD TCGA-EJ-5512-01A 2 10 5'UTR-CDS Inter-chr q22.1 q13.1 56854 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACPP-SAFB2 ACPP chr3 132036420 - SAFB2 chr19 5616346 - Exonic hg19 PRAD TCGA-HC-7233-01A 306 319 In-Frame Inter-chr q22.1 p13.3 Tumor suppressor gene Transcription factor Seq+ 56855 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACPP-STAT6 ACPP chr3 132077596 - STAT6 chr12 57496773 - Exonic hg19 PRAD TCGA-G9-6499-01A 2 10 Out-of-frame Inter-chr q22.1 q13.3 Transcription factor 56856 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACPP-ZNF462 ACPP chr3 132036420 - ZNF462 chr9 109685635 + Exonic hg19 PRAD TCGA-G9-6498-01A 3 14 5'UTR-5'UTR Inter-chr q22.1 q31.2 Transcription factor Seq+ 56857 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACPP-ZNF462 ACPP chr3 132036420 - ZNF462 chr9 109685635 + Exonic hg19 PRAD TCGA-WW-A8ZI-01A 35 21 5'UTR-5'UTR Inter-chr q22.1 q31.2 Transcription factor Seq+ 56858 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACSF2-SPAG9 ACSF2 chr17 48503750 - SPAG9 chr17 49091714 - Exonic hg19 BRCA TCGA-A8-A07I-01A 21 17 In-Frame Intra-chr q21.33 q21.33 Seq+ 56859 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACSF3-MYH7B ACSF3 chr16 89212457 - MYH7B chr20 33578541 + Exonic hg19 LUAD TCGA-67-6215-01A 2 1 Out-of-frame Inter-chr q24.3 q11.22 Seq+ 56860 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACSF3-ZNF483 ACSF3 chr16 89212457 - ZNF483 chr9 114338645 + Exonic hg19 SARC TCGA-DX-AATS-01A 6 7 Out-of-frame Inter-chr q24.3 q31.3 Transcription factor Seq+ 56861 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACSL3-MOGAT1 ACSL3 chr2 223725976 - MOGAT1 chr2 223553063 + Exonic hg19 BRCA TCGA-AC-A8OQ-01A 4 1 5'UTR-CDS Intra-chr q36.1 q36.1 Seq+ 56862 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACSL3-PHGDH ACSL3 chr2 223725976 - PHGDH chr1 120263793 + Exonic hg19 LUAD TCGA-69-7979-01A 61 88 5'UTR-CDS Inter-chr q36.1 p12 Seq+ 56863 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACSL3-SGPP2 ACSL3 chr2 223725976 - SGPP2 chr2 223386486 + Exonic hg19 PRAD TCGA-CH-5750-01A 4 5 5'UTR-CDS Intra-chr q36.1 q36.1 Seq+ 56864 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACSL3-SGPP2 ACSL3 chr2 223725976 - SGPP2 chr2 223386486 + Exonic hg19 PRAD TCGA-CH-5751-01A 15 22 5'UTR-CDS Intra-chr q36.1 q36.1 Seq+ 56865 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACSL3-SMARCAL1 ACSL3 chr2 223795530 - SMARCAL1 chr2 217341832 + Exonic hg19 LIHC TCGA-BW-A5NO-01A 4 1 Out-of-frame Intra-chr q36.1 q35 56866 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACSL6-CDS2 ACSL6 chr5 131307243 - CDS2 chr20 5154169 + Exonic hg19 PRAD TCGA-ZG-A9LZ-01A 4 2 In-Frame Inter-chr q31.1 p12.3 56867 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACSM1-DNAH3 ACSM1 chr16 20681149 - DNAH3 chr16 21128660 - Exonic hg19 PRAD TCGA-EJ-A46G-01A 4 4 Out-of-frame Intra-chr p12.3 p12.3 56868 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACSS1-CDH4 ACSS1 chr20 25028721 - CDH4 chr20 60318619 + Exonic hg19 CHOL TCGA-3X-AAVE-01A 3 1 Out-of-frame Intra-chr p11.21 q13.33 Tumor suppressor gene Seq+ 56869 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACSS1-DBNDD2 ACSS1 chr20 25038405 - DBNDD2 chr20 44037100 + Exonic hg19 LUSC TCGA-22-A5C4-01A 17 15 CDS-5'UTR Intra-chr p11.21 q13.12 Seq+ 56870 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACSS1-PHACTR3 ACSS1 chr20 25038405 - PHACTR3 chr20 58318162 + Exonic hg19 BRCA TCGA-D8-A1XJ-01A 16 10 In-Frame Intra-chr p11.21 q13.32 Seq+ 56871 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACSS1-ZFAND3 ACSS1 chr20 24986874 - ZFAND3 chr6 38029369 + Exonic hg19 KIRP TCGA-DZ-6131-01A 2 2 3'UTR-CDS Inter-chr p11.21 p21.2 56872 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACSS2-GSS ACSS2 chr20 33502240 - GSS chr20 33516754 - Exonic hg19 BRCA TCGA-C8-A134-01A 13 4 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 56873 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACSS3-AVIL ACSS3 chr12 81472210 - AVIL chr12 58204910 - Exonic hg19 SARC TCGA-3R-A8YX-01A 6 6 In-Frame Intra-chr q21.31 q14.1 Seq+ 56874 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACSS3-CYP39A1 ACSS3 chr12 81472210 - CYP39A1 chr6 46518174 - Exonic hg19 SARC TCGA-DX-A7EI-01A 54 37 Out-of-frame Inter-chr q21.31 p12.3 Seq+ 56875 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACSS3-INSR ACSS3 chr12 81545875 - INSR chr19 7143101 - Exonic hg19 SARC TCGA-3B-A9HS-01A 2 11 Out-of-frame Inter-chr q21.31 p13.2 TK:InsR 56876 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACSS3-STAU2 ACSS3 chr12 81537026 - STAU2 chr8 74334937 - Exonic hg19 SARC TCGA-DX-A7EI-01A 111 95 In-Frame Inter-chr q21.31 q21.11 Seq+ 56877 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTA2-COL6A1 ACTA2 chr10 90694833 - COL6A1 chr21 47407069 + Exonic hg19 SARC TCGA-DX-A7EM-01A 4 1 3'UTR-CDS Inter-chr q23.31 q22.3 56878 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTB-AC120194.1 ACTB chr7 5567255 - AC120194.1 chr8 71485681 + Exonic hg19 ACC TCGA-OR-A5J6-01A 2 14 Out-of-frame Inter-chr p22.1 56879 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTB-AHSG ACTB chr7 5567255 - AHSG chr3 186330855 + Exonic hg19 LIHC TCGA-2Y-A9H7-01A 2 1 Out-of-frame Inter-chr p22.1 q27.3 56880 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTB-CDC5L ACTB chr7 5566782 - CDC5L chr6 44374060 + Exonic hg19 BLCA TCGA-FD-A3SO-01A 2 1 3'UTR-5'UTR Inter-chr p22.1 p21.1 Transcription factor 56881 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTB-CELA3A ACTB chr7 5567255 - CELA3A chr1 22328149 + Exonic hg19 PAAD TCGA-HZ-8003-01A 2 1 3'UTR-5'UTR Inter-chr p22.1 p36.12 56882 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTB-CELA3A ACTB chr7 5567255 - CELA3A chr1 22328149 + Exonic hg19 PAAD TCGA-HZ-A77O-01A 2 2 3'UTR-5'UTR Inter-chr p22.1 p36.12 56883 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTB-COL17A1 ACTB chr7 5567255 - COL17A1 chr10 105845629 - Exonic hg19 LUAD TCGA-78-7542-01A 4 2 Out-of-frame Inter-chr p22.1 q25.1 Seq+ 56884 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTB-CSE1L ACTB chr7 5567255 - CSE1L chr20 47662862 + Exonic hg19 LUSC TCGA-77-7337-01A 2 1 Out-of-frame Inter-chr p22.1 q13.13 56885 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTB-EML2 ACTB chr7 5567034 - EML2 chr19 46142669 - Exonic hg19 LUAD TCGA-49-6761-01A 2 1 Out-of-frame Inter-chr p22.1 q13.32 56886 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTB-GLTSCR2 ACTB chr7 5567255 - GLTSCR2 chr19 48248811 + Exonic hg19 HNSC TCGA-CQ-A4CD-01A 2 4 Out-of-frame Inter-chr p22.1 Tumor suppressor gene 56887 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTB-GNB2L1 ACTB chr7 5567255 - GNB2L1 chr5 180670914 - Exonic hg19 READ TCGA-AH-6903-01A 2 3 Out-of-frame Inter-chr p22.1 Tumor suppressor gene 56888 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTB-GNB2L1 ACTB chr7 5567255 - GNB2L1 chr5 180670914 - Exonic hg19 PRAD TCGA-G9-6371-01A 3 1 Out-of-frame Inter-chr p22.1 Tumor suppressor gene 56889 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTB-GNB2L1 ACTB chr7 5567255 - GNB2L1 chr5 180670914 - Exonic hg19 PRAD TCGA-HC-A632-01A 2 2 Out-of-frame Inter-chr p22.1 Tumor suppressor gene 56890 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTB-HLA-DQB1 ACTB chr7 5567255 - HLA-DQB1 chr6 32634461 - Exonic hg19 BRCA TCGA-OL-A66I-01A 2 6 Out-of-frame Inter-chr p22.1 56891 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTB-KIAA0182 ACTB chr7 5567255 - KIAA0182 chr16 85696972 + Exonic hg19 BRCA TCGA-A2-A0CW-01A 2 1 Out-of-frame Inter-chr p22.1 56892 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTB-KIAA0182 ACTB chr7 5567255 - KIAA0182 chr16 85696972 + Exonic hg19 BLCA TCGA-BT-A3PH-01A 2 1 Out-of-frame Inter-chr p22.1 56893 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTB-PMP2 ACTB chr7 5567255 - PMP2 chr8 82359674 - Exonic hg19 LGG TCGA-DH-A669-01A 2 1 Out-of-frame Inter-chr p22.1 q21.13 56894 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTB-RNF216 ACTB chr7 5570155 - RNF216 chr7 5756397 - Exonic hg19 BRCA TCGA-BH-A18T-01A 152 143 3'UTR-CDS Intra-chr p22.1 p22.1 Seq+ 56895 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTB-SAFB ACTB chr7 5567255 - SAFB chr19 5623150 + Exonic hg19 COAD TCGA-A6-6649-01A 2 2 Out-of-frame Inter-chr p22.1 p13.3 Tumor suppressor gene Transcription factor 56896 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTB-SEPP1 ACTB chr7 5567255 - SEPP1 chr5 42811994 - Exonic hg19 LIHC TCGA-DD-A73F-01A 2 1 Out-of-frame Inter-chr p22.1 56897 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTB-TM4SF4 ACTB chr7 5567255 - TM4SF4 chr3 149192486 + Exonic hg19 PAAD TCGA-HZ-7924-01A 2 1 Out-of-frame Inter-chr p22.1 q25.1 56898 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTB-TM4SF4 ACTB chr7 5567255 - TM4SF4 chr3 149192486 + Exonic hg19 PAAD TCGA-IB-7654-01A 2 1 Out-of-frame Inter-chr p22.1 q25.1 56899 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTB-YWHAE ACTB chr7 5567255 - YWHAE chr17 1303494 - Exonic hg19 KIRP TCGA-DW-7838-01A 2 1 Out-of-frame Inter-chr p22.1 p13.3 56900 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTB-YWHAE ACTB chr7 5567255 - YWHAE chr17 1303494 - Exonic hg19 CESC TCGA-EA-A5FO-01A 2 3 Out-of-frame Inter-chr p22.1 p13.3 56901 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTG1-ANKS1A ACTG1 chr17 79476999 - ANKS1A chr6 34977682 + Exonic hg19 COAD TCGA-D5-6931-01A 2 1 Out-of-frame Inter-chr q25.3 p21.31 56902 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTG1-ANKS1A ACTG1 chr17 79476999 - ANKS1A chr6 34977682 + Exonic hg19 CESC TCGA-EA-A5ZD-01A 2 5 Out-of-frame Inter-chr q25.3 p21.31 56903 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTG1-ANKS1A ACTG1 chr17 79476999 - ANKS1A chr6 34977682 + Exonic hg19 UCS TCGA-N5-A4RO-01A 2 3 Out-of-frame Inter-chr q25.3 p21.31 56904 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTG1-CCT5 ACTG1 chr17 79476999 - CCT5 chr5 10250033 + Exonic hg19 PRAD TCGA-G9-6371-01A 2 4 Out-of-frame Inter-chr q25.3 p15.2 56905 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTG1-CLCN3 ACTG1 chr17 79476999 - CLCN3 chr4 170623929 + Exonic hg19 KIRP TCGA-BQ-5878-01A 2 2 Out-of-frame Inter-chr q25.3 q33 56906 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTG1-CLCN3 ACTG1 chr17 79476999 - CLCN3 chr4 170623929 + Exonic hg19 UCEC TCGA-EY-A1GO-01A 2 11 Out-of-frame Inter-chr q25.3 q33 56907 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTG1-CXCR5 ACTG1 chr17 79476999 - CXCR5 chr11 118754475 + Exonic hg19 DLBC TCGA-GR-A4D9-01B 2 3 3'UTR-5'UTR Inter-chr q25.3 q23.3 56908 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTG1-DDX21 ACTG1 chr17 79476999 - DDX21 chr10 70723858 + Exonic hg19 COAD TCGA-D5-6923-01A 2 2 Out-of-frame Inter-chr q25.3 q22.1 56909 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTG1-PLEKHA5 ACTG1 chr17 79476999 - PLEKHA5 chr12 19441012 + Exonic hg19 LUAD TCGA-73-4666-01A 2 15 Out-of-frame Inter-chr q25.3 p12.3 56910 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTG1-STAT6 ACTG1 chr17 79476999 - STAT6 chr12 57496773 - Exonic hg19 UCEC TCGA-AJ-A3EK-01A 2 14 Out-of-frame Inter-chr q25.3 q13.3 Transcription factor 56911 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTG1-STAT6 ACTG1 chr17 79476999 - STAT6 chr12 57496773 - Exonic hg19 COAD TCGA-G4-6586-01A 2 24 Out-of-frame Inter-chr q25.3 q13.3 Transcription factor 56912 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTG1-THSD4 ACTG1 chr17 79476999 - THSD4 chr15 72072881 + Exonic hg19 LUAD TCGA-71-6725-01A 2 12 Out-of-frame Inter-chr q25.3 q23 56913 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTG1-USP7 ACTG1 chr17 79476999 - USP7 chr16 9030586 - Exonic hg19 HNSC TCGA-CV-A460-01A 2 1 Out-of-frame Inter-chr q25.3 p13.2 56914 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTG1-ZNF827 ACTG1 chr17 79476999 - ZNF827 chr4 146859787 - Exonic hg19 PRAD TCGA-HC-7736-01A 2 5 Out-of-frame Inter-chr q25.3 q31.22 Transcription factor 56915 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTG2-ALK ACTG2 chr2 74128564 - ALK chr2 29449940 - Exonic hg19 SARC TCGA-IW-A3M6-01A 1072 556 Out-of-frame Intra-chr p13.1 p23.1 TK:ALK Oncogene Seq+ 56916 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTL6A-ALG3 ACTL6A chr3 179288029 - ALG3 chr3 183963600 - Exonic hg19 HNSC TCGA-CV-7103-01A 77 51 In-Frame Intra-chr q26.33 q27.1 Seq+ 56917 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTL8-ACOX1 ACTL8 chr1 18081999 - ACOX1 chr17 73974774 - Exonic hg19 ESCA TCGA-L5-A4OS-01A 4 22 5'UTR-5'UTR Inter-chr p36.13 q25.1 Seq+ 56918 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTN1-DCAF5 ACTN1 chr14 69445669 - DCAF5 chr14 69529228 - Exonic hg19 UCEC TCGA-A5-A3LP-01A 11 8 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 56919 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTN1-SCGN ACTN1 chr14 69343799 - SCGN chr6 25691284 + Exonic hg19 BRCA TCGA-BH-A0DQ-01A 16 12 In-Frame Inter-chr q24.1 p22.2 Seq+ 56920 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTN2-CHRM3 ACTN2 chr1 236850099 - CHRM3 chr1 239841486 + Exonic hg19 BRCA TCGA-AN-A0G0-01A 69 57 5'UTR-5'UTR Intra-chr q43 q43 Seq+ 56921 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTN4-CAPZB ACTN4 chr19 39207956 - CAPZB chr1 19712120 - Exonic hg19 BRCA TCGA-BH-A0B9-01A 65 34 In-Frame Inter-chr p36.13 Seq+ 56922 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTN4-CATSPERG ACTN4 chr19 39200116 - CATSPERG chr19 38834220 + Exonic hg19 LUSC TCGA-22-1005-01A 32 9 Out-of-frame Intra-chr q13.2 Seq+ 56923 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTN4-EIF3K ACTN4 chr19 39138547 - EIF3K chr19 39123070 + Exonic hg19 LUSC TCGA-63-A5MM-01A 156 145 In-Frame Intra-chr Seq+ 56924 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTN4-EIF3K ACTN4 chr19 39138547 - EIF3K chr19 39123070 + Exonic hg19 BLCA TCGA-E7-A541-01A 177 128 In-Frame Intra-chr Seq+ 56925 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTN4-EIF3K ACTN4 chr19 39138547 - EIF3K chr19 39125633 + Exonic hg19 SKCM TCGA-GN-A268-06A 46 9 Out-of-frame Intra-chr Seq+ 56926 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTN4-EIF3K ACTN4 chr19 39138547 - EIF3K chr19 39116668 + Exonic hg19 SARC TCGA-HS-A5N8-01A 64 50 In-Frame Intra-chr Seq+ 56927 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTN4-FTO ACTN4 chr19 39138547 - FTO chr16 53844052 + Exonic hg19 BRCA TCGA-E2-A150-01A 194 207 In-Frame Inter-chr q12.2 Seq+ 56928 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTN4-MGST2 ACTN4 chr19 39138547 - MGST2 chr4 140616351 + Exonic hg19 PRAD TCGA-EJ-A46E-01A 5 7 Out-of-frame Inter-chr q31.1 Seq+ 56929 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTN4-RYR1 ACTN4 chr19 39138547 - RYR1 chr19 39051753 + Exonic hg19 LIHC TCGA-ED-A7PX-01A 6 10 In-Frame Intra-chr q13.2 Seq+ 56930 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTN4-TXNDC12 ACTN4 chr19 39138547 - TXNDC12 chr1 52507269 - Exonic hg19 GBM TCGA-14-1034-02B 6 7 Out-of-frame Inter-chr p32.3 Seq+ 56931 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTN4-YIF1B ACTN4 chr19 39138547 - YIF1B chr19 38800283 - Exonic hg19 LUAD TCGA-55-A4DF-01A 60 35 Out-of-frame Intra-chr q13.2 Seq+ 56932 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTR10-MKX ACTR10 chr14 58667012 - MKX chr10 27964483 - Exonic hg19 SARC TCGA-FX-A76Y-01A 11 28 Out-of-frame Inter-chr q23.1 p12.1 Transcription factor Seq+ 56933 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTR1A-ARMC4 ACTR1A chr10 104262357 - ARMC4 chr10 28101554 - Exonic hg19 PRAD TCGA-G9-6361-01A 10 7 In-Frame Intra-chr q24.32 p12.1 Seq+ 56934 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTR1A-C17orf57 ACTR1A chr10 104238986 - C17orf57 chr17 45471391 + Exonic hg19 UCS TCGA-N9-A4PZ-01A 8 2 3'UTR-CDS Inter-chr q24.32 56935 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTR1A-OBFC1 ACTR1A chr10 104262357 - OBFC1 chr10 105642599 - Exonic hg19 PRAD TCGA-VP-A87K-01A 6 9 Out-of-frame Intra-chr q24.32 Seq+ 56936 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTR2-TSGA10 ACTR2 chr2 65455091 - TSGA10 chr2 99722160 - Exonic hg19 LUSC TCGA-22-5492-01A 23 24 In-Frame Intra-chr p14 TKL:STKR q11.2 Seq+ 56937 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACTR5-RPRD1B ACTR5 chr20 37396239 - RPRD1B chr20 36718128 + Exonic hg19 LUAD TCGA-91-6828-01A 6 2 In-Frame Intra-chr q11.23 q11.23 Seq+ 56938 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACVR1-CCDC148 ACVR1 chr2 158674897 - CCDC148 chr2 159035508 - Exonic hg19 LUAD TCGA-44-7660-01A 5 6 5'UTR-CDS Intra-chr q24.1 q24.1 Seq+ 56939 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACVR1-CCDC148 ACVR1 chr2 158655939 - CCDC148 chr2 159145348 - Exonic hg19 UCEC TCGA-5B-A90C-01A 2 2 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 56940 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACVR1-NFATC1 ACVR1 chr2 158674897 - NFATC1 chr18 77246248 + Exonic hg19 OV TCGA-24-2281-01A 6 42 5'UTR-CDS Inter-chr q24.1 q23 Transcription factor Seq+ 56941 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACVR1B-CS ACVR1B chr12 52380726 - CS chr12 56680429 - Exonic hg19 LIHC TCGA-XR-A8TG-01A 14 3 Out-of-frame Intra-chr q13.13 Oncogene q13.3 56942 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACVR1B-SUPT16H ACVR1B chr12 52390862 - SUPT16H chr14 21829491 - Exonic hg19 STAD TCGA-BR-8680-01A 2 3 Out-of-frame Inter-chr q13.13 Oncogene q11.2 56943 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACVR2A-AC010859.1 ACVR2A chr2 148602776 - AC010859.1 chr8 97847201 + Exonic hg19 SARC TCGA-DX-A6BF-01A 33 22 Out-of-frame Inter-chr q22.3 Oncogene 56944 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACVR2A-AKT3 ACVR2A chr2 148602776 - AKT3 chr1 243828185 - Exonic hg19 PRAD TCGA-G9-6348-01A 5 3 In-Frame Inter-chr q22.3 Oncogene AGC:Akt Oncogene Seq+ 56945 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACVR2A-CASP8 ACVR2A chr2 148674995 - CASP8 chr2 202131184 + Exonic hg19 LUSC TCGA-21-1082-01A 20 12 Out-of-frame Intra-chr q22.3 Oncogene q33.1 Oncogene Tumor suppressor gene Seq+ 56946 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACVR2A-KANK1 ACVR2A chr2 148672903 - KANK1 chr9 676890 + Exonic hg19 PRAD TCGA-EJ-7318-01B 3 2 CDS-5'UTR Inter-chr q22.3 Oncogene p24.3 Tumor suppressor gene 56947 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ACVR2A-SUMO1 ACVR2A chr2 148680680 - SUMO1 chr2 203072044 - Exonic hg19 SARC TCGA-FX-A2QS-01A 2 31 Out-of-frame Intra-chr q22.3 Oncogene q33.1 Seq+ 56948 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AD000671.1-CEACAM16 AD000671.1 chr19 36228164 - CEACAM16 chr19 45213768 + Exonic hg19 LUAD TCGA-49-4488-01A 8 5 Out-of-frame Intra-chr q13.12 q13.31 56949 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAL-C15orf43 ADAL chr15 43638178 - C15orf43 chr15 45266065 + Exonic hg19 SARC TCGA-MB-A8JL-01A 8 7 Out-of-frame Intra-chr q15.3 56950 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAM10-C15orf43 ADAM10 chr15 59009776 - C15orf43 chr15 45266065 + Exonic hg19 BLCA TCGA-4Z-AA7R-01A 34 22 3'UTR-CDS Intra-chr q21.3 Seq+ 56951 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAM10-FIZ1 ADAM10 chr15 58957296 - FIZ1 chr19 56109267 - Exonic hg19 BRCA TCGA-A7-A0DA-01A 54 35 3'UTR-5'UTR Inter-chr q21.3 q13.42 Transcription factor Seq+ 56952 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAM10-PLAC9 ADAM10 chr15 59041679 - PLAC9 chr10 81901838 + Exonic hg19 BRCA TCGA-C8-A8HP-01A 83 62 3'UTR-CDS Inter-chr q21.3 q22.3 Seq+ 56953 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAM10-ZNF770 ADAM10 chr15 59041679 - ZNF770 chr15 35279874 - Exonic hg19 LGG TCGA-HT-8011-01A 3 2 3'UTR-5'UTR Intra-chr q21.3 q14 Transcription factor Seq+ 56954 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAM15-CHD1L ADAM15 chr1 155032450 - CHD1L chr1 146739085 + Exonic hg19 PAAD TCGA-2J-AABK-01A 6 26 In-Frame Intra-chr q21.3 q21.1 Seq+ 56955 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAM15-DCST1 ADAM15 chr1 155025253 - DCST1 chr1 155006448 + Exonic hg19 KIRC TCGA-AS-3777-01A 17 17 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 56956 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAM15-DCST1 ADAM15 chr1 155025253 - DCST1 chr1 155006448 + Exonic hg19 LIHC TCGA-DD-A115-01A 40 18 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 56957 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAM17-YWHAQ ADAM17 chr2 9675963 - YWHAQ chr2 9731644 - Exonic hg19 GBM TCGA-76-4929-01A 71 199 In-Frame Intra-chr p25.1 p25.1 Seq+ 56958 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAM18-LSM1 ADAM18 chr8 39581426 - LSM1 chr8 38029551 - Exonic hg19 BRCA TCGA-E2-A105-01A 7 11 Out-of-frame Intra-chr p11.23 Seq+ 56959 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAM2-MTMR2 ADAM2 chr8 39603991 - MTMR2 chr11 95598840 - Exonic hg19 LUAD TCGA-86-A4D0-01A 6 1 Out-of-frame Inter-chr q21 Seq+ 56960 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAM22-ASB4 ADAM22 chr7 87754974 - ASB4 chr7 95166883 + Exonic hg19 KIRP TCGA-B9-4116-01A 2 3 In-Frame Intra-chr q21.12 q21.3 Seq+ 56961 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAM22-RUNDC3B ADAM22 chr7 87607727 - RUNDC3B chr7 87445456 + Exonic hg19 UCEC TCGA-AJ-A3QS-01A 2 4 In-Frame Intra-chr q21.12 q21.12 Seq+ 56962 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAM23-CERKL ADAM23 chr2 207424842 - CERKL chr2 182468806 - Exonic hg19 LUSC TCGA-33-4538-01A 32 14 Out-of-frame Intra-chr q33.3 q31.3 Seq+ 56963 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAM23-PPAP2A ADAM23 chr2 207432046 - PPAP2A chr5 54721162 - Exonic hg19 HNSC TCGA-CR-7397-01A 2 3 In-Frame Inter-chr q33.3 56964 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAM32-ZNF251 ADAM32 chr8 39009067 - ZNF251 chr8 145948767 - Exonic hg19 BRCA TCGA-AN-A0FX-01A 2 6 Out-of-frame Intra-chr Transcription factor Seq+ 56965 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAM9-CLYBL ADAM9 chr8 38854679 - CLYBL chr13 100425078 + Exonic hg19 BRCA TCGA-D8-A1JK-01A 15 5 Out-of-frame Inter-chr q32.3 Seq+ 56966 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAM9-HTRA4 ADAM9 chr8 38884329 - HTRA4 chr8 38839172 + Exonic hg19 LUSC TCGA-77-7139-01A 13 13 Out-of-frame Intra-chr p11.22 Seq+ 56967 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAM9-MTL5 ADAM9 chr8 38928922 - MTL5 chr11 68483407 - Exonic hg19 BLCA TCGA-LT-A8JT-01A 6 3 In-Frame Inter-chr 56968 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAM9-PROSC ADAM9 chr8 38865502 - PROSC chr8 37623044 + Exonic hg19 BRCA TCGA-WT-AB41-01A 12 13 In-Frame Intra-chr Seq+ 56969 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAM9-RGS20 ADAM9 chr8 38854679 - RGS20 chr8 54791818 + Exonic hg19 PRAD TCGA-EJ-5510-01A 22 9 Out-of-frame Intra-chr q11.23 Seq+ 56970 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAM9-RNF170 ADAM9 chr8 38865502 - RNF170 chr8 42716998 - Exonic hg19 LUSC TCGA-21-1076-01A 49 26 In-Frame Intra-chr p11.21 Seq+ 56971 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAM9-RNF170 ADAM9 chr8 38854679 - RNF170 chr8 42743014 - Exonic hg19 LUAD TCGA-50-5933-01A 11 8 5'UTR-5'UTR Intra-chr p11.21 Seq+ 56972 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAM9-TACC1 ADAM9 chr8 38865502 - TACC1 chr8 38602413 + Exonic hg19 LUAD TCGA-44-7660-01A 4 1 Out-of-frame Intra-chr p11.22 56973 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAM9-UNC5D ADAM9 chr8 38884329 - UNC5D chr8 35406810 + Exonic hg19 BLCA TCGA-XF-A8HG-01A 7 5 Out-of-frame Intra-chr p12 Tumor suppressor gene Seq+ 56974 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAMTS10-MLLT1 ADAMTS10 chr19 8665812 - MLLT1 chr19 6270770 - Exonic hg19 BRCA TCGA-AC-A2B8-01A 29 18 In-Frame Intra-chr p13.2 p13.3 Seq+ 56975 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAMTS12-C1QTNF3 ADAMTS12 chr5 33891835 - C1QTNF3 chr5 34035863 - Exonic hg19 BRCA TCGA-AN-A0AR-01A 5 1 Out-of-frame Intra-chr p13.2 p13.2 56976 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAMTS12-RAI14 ADAMTS12 chr5 33881224 - RAI14 chr5 34757573 + Exonic hg19 SKCM TCGA-EB-A44Q-06A 11 2 In-Frame Intra-chr p13.2 p13.2 Seq+ 56977 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAMTS12-ZFR ADAMTS12 chr5 33662021 - ZFR chr5 32356045 - Exonic hg19 BRCA TCGA-AN-A0XU-01A 12 8 Out-of-frame Intra-chr p13.2 p13.3 56978 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAMTS13-LHX2 ADAMTS13 chr9 136315086 - LHX2 chr9 126794699 + Exonic hg19 BRCA TCGA-AC-A2BM-01A 3 2 Out-of-frame Intra-chr q33.3 Transcription factor Seq+ 56979 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAMTS16-ETV6 ADAMTS16 chr5 5209359 - ETV6 chr12 11905384 + Exonic hg19 BRCA TCGA-A7-A4SD-01A 59 14 In-Frame Inter-chr p15.32 p13.2 Tumor suppressor gene Transcription factor Seq+ 56980 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAMTS16-TERT ADAMTS16 chr5 5191903 - TERT chr5 1282739 - Exonic hg19 LUAD TCGA-44-2662-01A 3 5 Out-of-frame Intra-chr p15.32 p15.33 Oncogene Seq+ 56981 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAMTS17-AKAP13 ADAMTS17 chr15 100533253 - AKAP13 chr15 86265222 + Exonic hg19 SKCM TCGA-GN-A26A-06A 20 3 In-Frame Intra-chr q26.3 q25.3 Seq+ 56982 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAMTS17-CERS3 ADAMTS17 chr15 100692817 - CERS3 chr15 100996251 - Exonic hg19 LUSC TCGA-33-4532-01A 30 14 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 56983 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAMTS17-LPAR1 ADAMTS17 chr15 100589062 - LPAR1 chr9 113638002 - Exonic hg19 GBM TCGA-14-1034-02B 20 12 Out-of-frame Inter-chr q26.3 q31.3 Seq+ 56984 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAMTS17-NCF4 ADAMTS17 chr15 100533253 - NCF4 chr22 37260087 + Exonic hg19 SKCM TCGA-ER-A19C-06A 22 8 Out-of-frame Inter-chr q26.3 Seq+ 56985 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAMTS17-PCDHA8 ADAMTS17 chr15 100871094 - PCDHA8 chr5 140358534 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 3 1 Out-of-frame Inter-chr q26.3 q31.3 Seq+ 56986 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAMTS17-RTKN2 ADAMTS17 chr15 100537590 - RTKN2 chr10 64022580 - Exonic hg19 PRAD TCGA-J4-A83I-01A 3 9 In-Frame Inter-chr q26.3 q21.2 Seq+ 56987 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAMTS17-SLC12A1 ADAMTS17 chr15 100871094 - SLC12A1 chr15 48548008 + Exonic hg19 SARC TCGA-LI-A9QH-01A 5 5 In-Frame Intra-chr q26.3 q21.1 Seq+ 56988 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAMTS20-C12orf28 ADAMTS20 chr12 43925839 - C12orf28 chr12 70329893 + Exonic hg19 SARC TCGA-DX-A7EI-01A 2 1 Out-of-frame Intra-chr q12 Oncogene 56989 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAMTS7-AC087465.1 ADAMTS7 chr15 79080573 - AC087465.1 chr15 77407661 - Exonic hg19 SARC TCGA-DX-A23R-01A 16 19 Out-of-frame Intra-chr q25.1 q24.3 56990 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAMTS7-TMEM135 ADAMTS7 chr15 79103463 - TMEM135 chr11 86947680 + Exonic hg19 SKCM TCGA-ER-A3ET-06A 3 4 Out-of-frame Inter-chr q25.1 q14.2 Seq+ 56991 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAMTS9-CHL1 ADAMTS9 chr3 64619374 - CHL1 chr3 447178 + Exonic hg19 LUAD TCGA-62-8395-01A 2 1 Out-of-frame Intra-chr p14.1 Tumor suppressor gene p26.3 56992 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAMTS9-SYNPR ADAMTS9 chr3 64579934 - SYNPR chr3 63542219 + Exonic hg19 PRAD TCGA-J4-A83J-01A 8 4 Out-of-frame Intra-chr p14.1 Tumor suppressor gene p14.2 Seq+ 56993 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAMTS9-ULK4 ADAMTS9 chr3 64635313 - ULK4 chr3 41877463 - Exonic hg19 LUAD TCGA-38-4630-01A 29 11 In-Frame Intra-chr p14.1 Tumor suppressor gene p22.1 Other:ULK Seq+ 56994 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAMTSL1-ERV3-1 ADAMTSL1 chr9 18504954 - ERV3-1 chr7 64453792 - Exonic hg19 LUSC TCGA-68-A59I-01A 2 2 Out-of-frame Inter-chr p22.2 q11.21 56995 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAMTSL1-WNT5B ADAMTSL1 chr9 18474293 - WNT5B chr12 1740464 + Exonic hg19 SKCM TCGA-FR-A7U9-06A 35 22 CDS-5'UTR Inter-chr p22.2 p13.33 Seq+ 56996 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAMTSL2-MAPKAP1 ADAMTSL2 chr9 136406123 - MAPKAP1 chr9 128268696 - Exonic hg19 LUSC TCGA-22-4604-01A 6 4 In-Frame Intra-chr q34.2 q33.3 Seq+ 56997 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAP1-C8orf38 ADAP1 chr7 994032 - C8orf38 chr8 96044223 + Exonic hg19 BRCA TCGA-A1-A0SO-01A 2 1 Out-of-frame Inter-chr p22.3 56998 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAP1-COX19 ADAP1 chr7 959605 - COX19 chr7 1009092 - Exonic hg19 UCEC TCGA-AJ-A23N-01A 47 18 Out-of-frame Intra-chr p22.3 p22.3 56999 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAP1-GET4 ADAP1 chr7 959605 - GET4 chr7 925693 + Exonic hg19 COAD TCGA-D5-6541-01A 3 5 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 57000 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAP1-MAD1L1 ADAP1 chr7 966189 - MAD1L1 chr7 2108973 - Exonic hg19 BLCA TCGA-DK-AA6P-01A 5 2 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 57001 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAP1-SUN1 ADAP1 chr7 959605 - SUN1 chr7 908986 + Exonic hg19 CESC TCGA-DS-A7WH-01A 3 3 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 57002 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAR-CCT5 ADAR chr1 154554538 - CCT5 chr5 10250033 + Exonic hg19 KICH TCGA-KM-8639-01A 2 6 Out-of-frame Inter-chr q21.3 p15.2 57003 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAR-GPATCH4 ADAR chr1 154573517 - GPATCH4 chr1 156568896 - Exonic hg19 LUAD TCGA-78-7146-01A 15 5 CDS-5'UTR Intra-chr q21.3 q23.1 Seq+ 57004 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAR-KRTCAP2 ADAR chr1 154580468 - KRTCAP2 chr1 155142333 - Exonic hg19 LIHC TCGA-RC-A6M4-01A 69 262 Out-of-frame Intra-chr q21.3 q22 Seq+ 57005 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAR-UBE2J2 ADAR chr1 154580468 - UBE2J2 chr1 1203372 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 75 57 CDS-5'UTR Intra-chr q21.3 p36.33 Seq+ 57006 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAT1-KARS ADAT1 chr16 75654529 - KARS chr16 75678360 - Exonic hg19 LUSC TCGA-56-8626-01A 21 10 CDS-5'UTR Intra-chr q23.1 q23.1 Seq+ 57007 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADAT2-VTA1 ADAT2 chr6 143771700 - VTA1 chr6 142525122 + Exonic hg19 UVM TCGA-VD-A8KJ-01A 11 1 Out-of-frame Intra-chr q24.2 q24.1 57008 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADC-PHIP ADC chr1 33563780 - PHIP chr6 79713575 - Exonic hg19 BRCA TCGA-A7-A5ZV-01A 6 3 In-Frame Inter-chr q14.1 57009 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCK2-DPP6 ADCK2 chr7 140390613 - DPP6 chr7 154429531 + Exonic hg19 BRCA TCGA-A8-A07I-01A 9 2 In-Frame Intra-chr q34 Atypical:ABC1 Seq+ 57010 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCK2-TBXAS1 ADCK2 chr7 140387041 - TBXAS1 chr7 139661718 + Exonic hg19 STAD TCGA-CG-4449-01A 6 8 In-Frame Intra-chr q34 Atypical:ABC1 q34 Seq+ 57011 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCK3-EPHX1 ADCK3 chr1 227128100 - EPHX1 chr1 226032199 + Exonic hg19 OV TCGA-61-1998-01A 14 10 5'UTR-CDS Intra-chr Atypical:ABC1 q42.12 Seq+ 57012 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCK4-AKAP8 ADCK4 chr19 41201894 - AKAP8 chr19 15469873 - Exonic hg19 LUAD TCGA-49-4486-01A 52 29 In-Frame Intra-chr Atypical:ABC1 p13.12 Transcription factor Seq+ 57013 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCK5-CPSF1 ADCK5 chr8 145608431 - CPSF1 chr8 145619375 - Exonic hg19 UCS TCGA-ND-A4WF-01A 3 4 Out-of-frame Intra-chr q24.3 Atypical:ABC1 q24.3 Seq+ 57014 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCK5-HEATR7A ADCK5 chr8 145617066 - HEATR7A chr8 145267897 + Exonic hg19 LUSC TCGA-NC-A5HJ-01A 2 1 Out-of-frame Intra-chr q24.3 Atypical:ABC1 57015 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCK5-HSF1 ADCK5 chr8 145608431 - HSF1 chr8 145537197 + Exonic hg19 SKCM TCGA-ER-A19W-06A 11 18 In-Frame Intra-chr q24.3 Atypical:ABC1 q24.3 Transcription factor Seq+ 57016 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCY1-EYA4 ADCY1 chr7 45614781 - EYA4 chr6 133595854 + Exonic hg19 BRCA TCGA-AR-A0TW-01A 18 6 CDS-5'UTR Inter-chr p12.3 q23.2 Tumor suppressor gene Seq+ 57017 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCY2-CLPTM1L ADCY2 chr5 7789913 - CLPTM1L chr5 1320846 - Exonic hg19 SKCM TCGA-FS-A4F4-06A 127 51 In-Frame Intra-chr p15.31 p15.33 Seq+ 57018 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCY2-PARP8 ADCY2 chr5 7784562 - PARP8 chr5 50055477 + Exonic hg19 SKCM TCGA-BF-AAP6-01A 44 9 Out-of-frame Intra-chr p15.31 q11.1 Seq+ 57019 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCY2-RPAP2 ADCY2 chr5 7698487 - RPAP2 chr1 92846281 + Exonic hg19 BLCA TCGA-FD-A3SR-01A 3 1 In-Frame Inter-chr p15.31 p22.1 57020 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCY5-PTPLB ADCY5 chr3 123166259 - PTPLB chr3 123247321 - Exonic hg19 BRCA TCGA-A2-A25D-01A 3 6 Out-of-frame Intra-chr q21.1 Seq+ 57021 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCY9-CLUAP1 ADCY9 chr16 4163751 - CLUAP1 chr16 3573158 + Exonic hg19 UCEC TCGA-PG-A7D5-01A 3 7 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 57022 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCY9-FAHD1 ADCY9 chr16 4163751 - FAHD1 chr16 1888017 + Exonic hg19 OV TCGA-29-A5NZ-01A 2 3 Out-of-frame Intra-chr p13.3 p13.3 57023 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCY9-FAM65C ADCY9 chr16 4163751 - FAM65C chr20 49247393 - Exonic hg19 UCEC TCGA-B5-A1MS-01B 9 2 CDS-5'UTR Inter-chr p13.3 Seq+ 57024 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCY9-GLYR1 ADCY9 chr16 4038995 - GLYR1 chr16 4862249 - Exonic hg19 BRCA TCGA-E9-A1RH-01A 61 35 In-Frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 57025 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCY9-NMRAL1 ADCY9 chr16 4163751 - NMRAL1 chr16 4519466 - Exonic hg19 LGG TCGA-DB-A64L-01A 5 1 In-Frame Intra-chr p13.3 p13.3 57026 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCY9-PHF16 ADCY9 chr16 4163751 - PHF16 chrX 46844285 + Exonic hg19 LIHC TCGA-ED-A4XI-01A 3 3 CDS-5'UTR Inter-chr p13.3 Seq+ 57027 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCY9-PRKCB ADCY9 chr16 4163751 - PRKCB chr16 23999829 + Exonic hg19 LUSC TCGA-33-4533-01A 19 8 In-Frame Intra-chr p13.3 p12.2 Tumor suppressor gene Seq+ 57028 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCY9-PRSS27 ADCY9 chr16 4038995 - PRSS27 chr16 2766527 - Exonic hg19 BRCA TCGA-LL-A5YP-01A 3 1 Out-of-frame Intra-chr p13.3 p13.3 57029 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCY9-RASSF8 ADCY9 chr16 4163751 - RASSF8 chr12 26231966 + Exonic hg19 LGG TCGA-TM-A84I-01A 16 17 In-Frame Inter-chr p13.3 p12.1 Tumor suppressor gene Seq+ 57030 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCY9-RMI2 ADCY9 chr16 4163751 - RMI2 chr16 11444499 + Exonic hg19 BRCA TCGA-S3-AA0Z-01A 4 1 In-Frame Intra-chr p13.3 p13.13 57031 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCY9-SPG20 ADCY9 chr16 4033233 - SPG20 chr13 36903654 - Exonic hg19 SARC TCGA-HB-A3L4-01A 12 4 Out-of-frame Inter-chr p13.3 q13.3 Seq+ 57032 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCY9-SRL ADCY9 chr16 4163751 - SRL chr16 4245787 - Exonic hg19 BRCA TCGA-A2-A0T7-01A 11 5 In-Frame Intra-chr p13.3 p13.3 Seq+ 57033 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCY9-TEAD4 ADCY9 chr16 4163751 - TEAD4 chr12 3103904 + Exonic hg19 LGG TCGA-TM-A84I-01A 186 131 CDS-5'UTR Inter-chr p13.3 p13.33 Transcription factor Seq+ 57034 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCY9-TFAP4 ADCY9 chr16 4163751 - TFAP4 chr16 4312702 - Exonic hg19 BLCA TCGA-FD-A3N6-01A 6 3 Out-of-frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 57035 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCY9-VASN ADCY9 chr16 4163751 - VASN chr16 4430870 + Exonic hg19 LGG TCGA-KT-A7W1-01A 4 3 CDS-5'UTR Intra-chr p13.3 Seq+ 57036 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCYAP1R1-AQP1 ADCYAP1R1 chr7 31092293 - AQP1 chr7 30961681 + Exonic hg19 LGG TCGA-TM-A84B-01A 255 351 5'UTR-CDS Intra-chr p14.3 p14.3 Seq+ 57037 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCYAP1R1-DFNA5 ADCYAP1R1 chr7 31132349 - DFNA5 chr7 24750007 - Exonic hg19 LGG TCGA-DU-A5TY-01A 24 18 Out-of-frame Intra-chr p14.3 p15.3 Tumor suppressor gene Seq+ 57038 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADCYAP1R1-TYK2 ADCYAP1R1 chr7 31151089 - TYK2 chr19 10491352 - Exonic hg19 LGG TCGA-QH-A6CZ-01A 2 7 Out-of-frame Inter-chr p14.3 p13.2 TK:JakA 57039 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADD1-ADK ADD1 chr4 2845751 - ADK chr10 76153899 + Exonic hg19 HNSC TCGA-CV-5978-01A 16 10 5'UTR-CDS Inter-chr p16.3 q22.2 Seq+ 57040 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADD1-ATP2B4 ADD1 chr4 2931789 - ATP2B4 chr1 203671172 + Exonic hg19 LGG TCGA-HT-7606-01A 2 1 3'UTR-CDS Inter-chr p16.3 q32.1 57041 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADD1-FAM193A ADD1 chr4 2845751 - FAM193A chr4 2733502 + Exonic hg19 OV TCGA-29-1693-01A 3 11 5'UTR-5'UTR Intra-chr p16.3 p16.3 Seq+ 57042 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADD1-FAM193A ADD1 chr4 2845751 - FAM193A chr4 2733502 + Exonic hg19 LUSC TCGA-37-4135-01A 55 40 5'UTR-5'UTR Intra-chr p16.3 p16.3 Seq+ 57043 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADD1-PCGF3 ADD1 chr4 2845751 - PCGF3 chr4 724419 + Exonic hg19 UCEC TCGA-A5-A1OH-01A 6 4 5'UTR-5'UTR Intra-chr p16.3 p16.3 Seq+ 57044 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADD1-SH3BP2 ADD1 chr4 2845751 - SH3BP2 chr4 2822341 + Exonic hg19 OV TCGA-04-1356-01A 4 1 5'UTR-5'UTR Intra-chr p16.3 p16.3 Seq+ 57045 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADD1-SH3BP2 ADD1 chr4 2845751 - SH3BP2 chr4 2826340 + Exonic hg19 BRCA TCGA-AO-A0J2-01A 2 3 5'UTR-CDS Intra-chr p16.3 p16.3 Seq+ 57046 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADD3-XPNPEP1 ADD3 chr10 111768057 - XPNPEP1 chr10 111652833 - Exonic hg19 BRCA TCGA-BH-A1EY-01A 19 18 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 57047 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADH7-CXCR5 ADH7 chr4 100333418 - CXCR5 chr11 118754475 + Exonic hg19 HNSC TCGA-CV-6940-01A 2 2 3'UTR-5'UTR Inter-chr q23 q23.3 57048 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADI1-DPY30 ADI1 chr2 3523139 - DPY30 chr2 32264561 - Exonic hg19 LIHC TCGA-DD-AAE2-01A 6 8 CDS-5'UTR Intra-chr p22.3 Seq+ 57049 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADI1-KHDRBS3 ADI1 chr2 3517628 - KHDRBS3 chr8 136619198 + Exonic hg19 BRCA TCGA-GI-A2C9-01A 17 7 In-Frame Inter-chr q24.23 Seq+ 57050 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADI1-RP13-512J5.1 ADI1 chr2 3517628 - RP13-512J5.1 chr2 3579900 - Exonic hg19 LUAD TCGA-38-4630-01A 53 10 Out-of-frame Intra-chr 57051 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADI1-ZFP91 ADI1 chr2 3502224 - ZFP91 chr11 58380235 + Exonic hg19 PRAD TCGA-EJ-5503-01A 2 1 3'UTR-CDS Inter-chr q12.1 Transcription factor 57052 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADIPOR1-CYB5R1 ADIPOR1 chr1 202927313 - CYB5R1 chr1 202932855 - Exonic hg19 BRCA TCGA-E9-A22E-01A 8 21 5'UTR-CDS Intra-chr q32.1 q32.1 Seq+ 57053 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADIPOR1-RGS8 ADIPOR1 chr1 202912886 - RGS8 chr1 182617438 - Exonic hg19 BRCA TCGA-E9-A243-01A 45 37 In-Frame Intra-chr q32.1 q25.3 Seq+ 57054 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADIPOR2-DCP1B ADIPOR2 chr12 1800357 - DCP1B chr12 2077076 - Exonic hg19 BLCA TCGA-BT-A20W-01A 42 11 5'UTR-CDS Intra-chr p13.33 p13.33 Seq+ 57055 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADIPOR2-ERC1 ADIPOR2 chr12 1800357 - ERC1 chr12 1372200 + Exonic hg19 BRCA TCGA-A8-A07R-01A 9 3 5'UTR-5'UTR Intra-chr p13.33 Seq+ 57056 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADIPOR2-FOXJ2 ADIPOR2 chr12 1863680 - FOXJ2 chr12 8197356 + Exonic hg19 BRCA TCGA-E2-A1LL-01A 52 21 In-Frame Intra-chr p13.33 p13.31 Transcription factor Seq+ 57057 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADIPOR2-NINJ2 ADIPOR2 chr12 1800357 - NINJ2 chr12 675344 - Exonic hg19 OV TCGA-24-1616-01A 39 8 5'UTR-CDS Intra-chr p13.33 p13.33 Seq+ 57058 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADIPOR2-SLC2A13 ADIPOR2 chr12 1863680 - SLC2A13 chr12 40442012 - Exonic hg19 SARC TCGA-DX-A240-01A 48 20 Out-of-frame Intra-chr p13.33 q12 Seq+ 57059 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADIPOR2-WNT5B ADIPOR2 chr12 1800357 - WNT5B chr12 1740464 + Exonic hg19 BRCA TCGA-B6-A0IK-01A 7 2 5'UTR-5'UTR Intra-chr p13.33 p13.33 57060 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADK-C10orf11 ADK chr10 76430027 - C10orf11 chr10 78316967 + Exonic hg19 UCEC TCGA-D1-A3JQ-01A 46 34 In-Frame Intra-chr q22.2 Seq+ 57061 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADK-C10orf11 ADK chr10 75984349 - C10orf11 chr10 77795766 + Exonic hg19 SARC TCGA-WK-A8XX-01A 2 1 In-Frame Intra-chr q22.2 Seq+ 57062 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADK-FAM149B1 ADK chr10 75936644 - FAM149B1 chr10 74987818 + Exonic hg19 OV TCGA-24-1426-01A 2 3 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 57063 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADK-KCNMA1 ADK chr10 76074503 - KCNMA1 chr10 79011014 - Exonic hg19 BRCA TCGA-AN-A0AJ-01A 8 12 In-Frame Intra-chr q22.2 q22.3 Seq+ 57064 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADK-KCNMA1 ADK chr10 75984349 - KCNMA1 chr10 78778857 - Exonic hg19 PRAD TCGA-KK-A8IH-01A 2 4 In-Frame Intra-chr q22.2 q22.3 Seq+ 57065 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADK-LRRTM3 ADK chr10 76430027 - LRRTM3 chr10 68857345 + Exonic hg19 BRCA TCGA-BH-A18U-01A 11 2 Out-of-frame Intra-chr q22.2 q21.3 Seq+ 57066 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADK-RP11-548K23.11 ADK chr10 75960596 - RP11-548K23.11 chr10 99416042 + Exonic hg19 BRCA TCGA-BH-A1EY-01A 12 1 Out-of-frame Intra-chr q22.2 57067 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADK-SIRT1 ADK chr10 75911101 - SIRT1 chr10 69676022 + Exonic hg19 KIRP TCGA-P4-AAVO-01A 3 1 Out-of-frame Intra-chr q22.2 q21.3 Tumor suppressor gene 57068 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADK-SPTAN1 ADK chr10 75984349 - SPTAN1 chr9 131329017 + Exonic hg19 BRCA TCGA-D8-A1JI-01A 5 1 CDS-5'UTR Inter-chr q22.2 q34.11 Seq+ 57069 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADK-TTC23 ADK chr10 75936644 - TTC23 chr15 99768937 - Exonic hg19 BRCA TCGA-AO-A03P-01A 27 21 CDS-5'UTR Inter-chr q22.2 q26.3 Seq+ 57070 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADNP-BMP7 ADNP chr20 49547363 - BMP7 chr20 55803477 - Exonic hg19 SKCM TCGA-ER-A196-01A 2 12 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.31 Seq+ 57071 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADNP-DDX27 ADNP chr20 49547363 - DDX27 chr20 47837989 + Exonic hg19 LUAD TCGA-78-7152-01A 4 30 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.13 Seq+ 57072 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADNP-DPM1 ADNP chr20 49545188 - DPM1 chr20 49562460 - Exonic hg19 BRCA TCGA-A2-A25B-01A 9 18 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.13 Seq+ 57073 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADNP-GHRH ADNP chr20 49547363 - GHRH chr20 35885311 - Exonic hg19 BRCA TCGA-A1-A0SJ-01A 20 16 5'UTR-5'UTR Intra-chr q13.13 Transcription factor q11.23 Seq+ 57074 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADNP-KCNG1 ADNP chr20 49547363 - KCNG1 chr20 49628953 - Exonic hg19 OV TCGA-29-1783-01A 14 11 5'UTR-5'UTR Intra-chr q13.13 Transcription factor q13.13 Seq+ 57075 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADNP-KCNG1 ADNP chr20 49547363 - KCNG1 chr20 49626901 - Exonic hg19 STAD TCGA-BR-8060-01A 3 13 5'UTR-5'UTR Intra-chr q13.13 Transcription factor q13.13 Seq+ 57076 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADNP-MMP24 ADNP chr20 49518554 - MMP24 chr20 33862075 + Exonic hg19 BRCA TCGA-A8-A08J-01A 2 11 Out-of-frame Intra-chr q13.13 Transcription factor q11.22 Seq+ 57077 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADNP-NFATC2 ADNP chr20 49547363 - NFATC2 chr20 50015267 - Exonic hg19 ESCA TCGA-L5-A4OQ-01A 3 19 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.2 Tumor suppressor gene Transcription factor Seq+ 57078 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADNP-PCIF1 ADNP chr20 49545188 - PCIF1 chr20 44571736 + Exonic hg19 LUSC TCGA-77-7140-01A 29 51 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.12 Seq+ 57079 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADNP-SCCPDH ADNP chr20 49518554 - SCCPDH chr1 246899277 + Exonic hg19 PRAD TCGA-KC-A7F6-01A 29 17 In-Frame Inter-chr q13.13 Transcription factor q44 Seq+ 57080 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADNP-SYCP2 ADNP chr20 49518554 - SYCP2 chr20 58468648 - Exonic hg19 BRCA TCGA-A1-A0SJ-01A 8 5 In-Frame Intra-chr q13.13 Transcription factor q13.33 Seq+ 57081 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADNP-ZNF841 ADNP chr20 49545188 - ZNF841 chr19 52570863 - Exonic hg19 BRCA TCGA-D8-A1XD-01A 6 10 5'UTR-CDS Inter-chr q13.13 Transcription factor q13.41 Transcription factor Seq+ 57082 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADNP2-L3MBTL4 ADNP2 chr18 77867356 - L3MBTL4 chr18 6215834 - Exonic hg19 BRCA TCGA-A7-A2KD-01A 4 7 5'UTR-CDS Intra-chr q23 Transcription factor p11.31 Tumor suppressor gene Transcription factor Seq+ 57083 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADNP2-PARD6G ADNP2 chr18 77867356 - PARD6G chr18 77960815 - Exonic hg19 LGG TCGA-CS-5393-01A 2 1 5'UTR-CDS Intra-chr q23 Transcription factor q23 Seq+ 57084 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADNP2-PQLC1 ADNP2 chr18 77875533 - PQLC1 chr18 77703462 - Exonic hg19 BRCA TCGA-BH-A1F2-01A 15 5 Out-of-frame Intra-chr q23 Transcription factor q23 Seq+ 57085 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADORA2B-SYN3 ADORA2B chr17 15848897 - SYN3 chr22 32992722 - Exonic hg19 BLCA TCGA-FD-A3B6-01A 16 14 Out-of-frame Inter-chr p12 q12.3 Seq+ 57086 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADPRHL2-SHPK ADPRHL2 chr1 36554716 - SHPK chr17 3533640 - Exonic hg19 BRCA TCGA-AR-A5QP-01A 9 10 Out-of-frame Inter-chr p34.3 p13.2 Seq+ 57087 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADRBK1-BAIAP2 ADRBK1 chr11 67051844 - BAIAP2 chr17 79058632 + Exonic hg19 BRCA TCGA-AO-A129-01A 7 10 In-Frame Inter-chr q25.3 Seq+ 57088 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADRBK1-IQGAP1 ADRBK1 chr11 67034283 - IQGAP1 chr15 90969342 + Exonic hg19 BRCA TCGA-AR-A0TS-01A 27 7 In-Frame Inter-chr q26.1 57089 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADRBK1-POLD4 ADRBK1 chr11 67034283 - POLD4 chr11 67120548 - Exonic hg19 BRCA TCGA-A2-A0CL-01A 11 4 Out-of-frame Intra-chr q13.2 57090 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADRBK1-STAT6 ADRBK1 chr11 67054027 - STAT6 chr12 57496773 - Exonic hg19 LAML TCGA-AB-2940-03A 2 2 Out-of-frame Inter-chr q13.3 Transcription factor 57091 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADRBK2-AP1B1 ADRBK2 chr22 26086250 - AP1B1 chr22 29747814 - Exonic hg19 BLCA TCGA-C4-A0F7-01A 29 21 In-Frame Intra-chr q12.2 Seq+ 57092 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADRBK2-EP300 ADRBK2 chr22 25961120 - EP300 chr22 41550999 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 18 21 Out-of-frame Intra-chr q13.2 Oncogene Seq+ 57093 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADRBK2-RHBDL3 ADRBK2 chr22 25961120 - RHBDL3 chr17 30615811 + Exonic hg19 BLCA TCGA-FD-A43P-01A 28 22 Out-of-frame Inter-chr q11.2 Seq+ 57094 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADRBK2-SF3A1 ADRBK2 chr22 26040632 - SF3A1 chr22 30749061 - Exonic hg19 BRCA TCGA-A2-A0T3-01A 21 13 In-Frame Intra-chr q12.2 Seq+ 57095 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADRBK2-ZNRF3 ADRBK2 chr22 25961120 - ZNRF3 chr22 29383064 + Exonic hg19 PRAD TCGA-J4-AATZ-01A 4 3 Out-of-frame Intra-chr q12.1 57096 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADRM1-CCT5 ADRM1 chr20 60883916 - CCT5 chr5 10250033 + Exonic hg19 ACC TCGA-OR-A5JR-01A 2 2 Out-of-frame Inter-chr q13.33 p15.2 57097 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADSL-CDH18 ADSL chr22 40757346 - CDH18 chr5 19981287 - Exonic hg19 KIRP TCGA-P4-A5EB-01A 8 7 CDS-5'UTR Inter-chr q13.1 p14.3 Seq+ 57098 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADSL-PVALB ADSL chr22 40742715 - PVALB chr22 37196962 - Exonic hg19 OV TCGA-61-2111-01A 3 7 Out-of-frame Intra-chr q13.1 Seq+ 57099 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADSS-AZIN1 ADSS chr1 244613292 - AZIN1 chr8 103862372 - Exonic hg19 LGG TCGA-DU-A7TA-01A 3 2 5'UTR-5'UTR Inter-chr q44 q22.3 57100 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADSS-BPNT1 ADSS chr1 244614937 - BPNT1 chr1 220263293 - Exonic hg19 SKCM TCGA-FS-A1ZD-06A 6 4 5'UTR-5'UTR Intra-chr q44 q41 Seq+ 57101 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADSS-CAPRIN2 ADSS chr1 244579283 - CAPRIN2 chr12 30864563 - Exonic hg19 SARC TCGA-DX-AB2H-01A 15 22 5'UTR-CDS Inter-chr q44 p11.21 Seq+ 57102 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ADSS-SERTAD4 ADSS chr1 244583472 - SERTAD4 chr1 210411289 + Exonic hg19 BRCA TCGA-BH-A203-01A 28 9 5'UTR-5'UTR Intra-chr q44 Seq+ 57103 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AEBP1-ANKS1A AEBP1 chr7 44154159 - ANKS1A chr6 34977682 + Exonic hg19 LUAD TCGA-64-1679-01A 2 3 Out-of-frame Inter-chr p13 Transcription factor p21.31 57104 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AEBP1-NDUFV1 AEBP1 chr7 44154159 - NDUFV1 chr11 67375697 + Exonic hg19 LUAD TCGA-55-6982-01A 2 2 Out-of-frame Inter-chr p13 Transcription factor q13.2 57105 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AEBP1-SLC38A5 AEBP1 chr7 44154161 - SLC38A5 chrX 48327824 - Exonic hg19 SARC TCGA-K1-A6RV-01A 2 13 5'UTR-5'UTR Inter-chr p13 Transcription factor p11.23 57106 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AEBP2-GYS2 AEBP2 chr12 19646920 - GYS2 chr12 21699404 - Exonic hg19 HNSC TCGA-F7-A50G-01A 72 49 Out-of-frame Intra-chr p12.3 Transcription factor p12.1 Seq+ 57107 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AEBP2-LMO3 AEBP2 chr12 19646920 - LMO3 chr12 16753802 - Exonic hg19 SARC TCGA-JV-A5VE-01A 15 7 In-Frame Intra-chr p12.3 Transcription factor p12.3 Seq+ 57108 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AEBP2-PLEKHA5 AEBP2 chr12 19626289 - PLEKHA5 chr12 19410367 + Exonic hg19 LUAD TCGA-55-A48Y-01A 5 4 In-Frame Intra-chr p12.3 Transcription factor p12.3 Seq+ 57109 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AEBP2-PLEKHA5 AEBP2 chr12 19615651 - PLEKHA5 chr12 19473496 + Exonic hg19 STAD TCGA-CD-8526-01A 2 17 In-Frame Intra-chr p12.3 Transcription factor p12.3 Seq+ 57110 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AEBP2-PRLR AEBP2 chr12 19646920 - PRLR chr5 35118224 - Exonic hg19 SKCM TCGA-D3-A3CC-06A 30 14 CDS-5'UTR Inter-chr p12.3 Transcription factor p13.2 Seq+ 57111 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AEBP2-ST8SIA1 AEBP2 chr12 19653155 - ST8SIA1 chr12 22354972 - Exonic hg19 SKCM TCGA-ER-A193-06A 17 13 Out-of-frame Intra-chr p12.3 Transcription factor p12.1 Seq+ 57112 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AES-ELK3 AES chr19 3052908 - ELK3 chr12 96588323 + Exonic hg19 HNSC TCGA-CN-6012-01A 2 2 5'UTR-5'UTR Inter-chr p13.3 q23.1 Transcription factor 57113 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AES-FOXP1 AES chr19 3052908 - FOXP1 chr3 71007472 - Exonic hg19 THYM TCGA-ZB-A96E-01A 2 26 3'UTR-3'UTR Inter-chr p13.3 p13 Oncogene Tumor suppressor gene Transcription factor 57114 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AES-TNNT1 AES chr19 3052908 - TNNT1 chr19 55646910 - Exonic hg19 LUSC TCGA-52-7812-01A 2 10 5'UTR-CDS Intra-chr p13.3 q13.42 57115 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFAP1-ABLIM2 AFAP1 chr4 7941383 - ABLIM2 chr4 8010829 - Exonic hg19 LUSC TCGA-77-A5GH-01A 2 7 5'UTR-CDS Intra-chr p16.1 p16.1 Seq+ 57116 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFAP1-ABLIM2 AFAP1 chr4 7776466 - ABLIM2 chr4 7994654 - Exonic hg19 BRCA TCGA-A2-A0D2-01A 105 74 In-Frame Intra-chr p16.1 p16.1 Seq+ 57117 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFAP1-ABLIM2 AFAP1 chr4 7857193 - ABLIM2 chr4 8099009 - Exonic hg19 BRCA TCGA-OL-A5D7-01A 10 11 In-Frame Intra-chr p16.1 p16.1 Seq+ 57118 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFAP1-ABLIM2 AFAP1 chr4 7840251 - ABLIM2 chr4 7986620 - Exonic hg19 MESO TCGA-UD-AAC7-01A 2 3 In-Frame Intra-chr p16.1 p16.1 Seq+ 57119 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFAP1-AKR1C1 AFAP1 chr4 7774547 - AKR1C1 chr10 4975429 + Exonic hg19 LGG TCGA-DH-A669-01A 8 1 CDS-5'UTR Inter-chr p16.1 p15.1 Seq+ 57120 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFAP1-AKR1C1 AFAP1 chr4 7774547 - AKR1C1 chr10 4975429 + Exonic hg19 LGG TCGA-DH-A669-02A 7 4 CDS-5'UTR Inter-chr p16.1 p15.1 Seq+ 57121 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFAP1-NTRK2 AFAP1 chr4 7780489 - NTRK2 chr9 87356807 + Exonic hg19 LGG TCGA-HT-7680-01A 115 51 In-Frame Inter-chr p16.1 q21.33 Oncogene Seq+ 57122 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFAP1-SLC45A1 AFAP1 chr4 7802169 - SLC45A1 chr1 8384366 + Exonic hg19 LUSC TCGA-46-3769-01A 20 12 CDS-5'UTR Inter-chr p16.1 p36.23 Seq+ 57123 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFF1-C4orf36 AFF1 chr4 87869723 - C4orf36 chr4 87812746 - Exonic hg19 SARC TCGA-QQ-A5VC-01A 2 2 5'UTR-5'UTR Intra-chr q21.3 Oncogene q21.3 57124 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFF1-GAST AFF1 chr4 87869723 - GAST chr17 39871684 + Exonic hg19 UCEC TCGA-EY-A2ON-01A 6 3 5'UTR-5'UTR Inter-chr q21.3 Oncogene q21.2 Seq+ 57125 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFF1-GPRIN3 AFF1 chr4 87928576 - GPRIN3 chr4 90171384 - Exonic hg19 SARC TCGA-DX-A8BU-01A 12 6 CDS-5'UTR Intra-chr q21.3 Oncogene q22.1 Seq+ 57126 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFF1-KLHL8 AFF1 chr4 88016121 - KLHL8 chr4 88116842 - Exonic hg19 SARC TCGA-3B-A9HS-01A 4 2 CDS-5'UTR Intra-chr q21.3 Oncogene q22.1 57127 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFF1-PAQR3 AFF1 chr4 88016121 - PAQR3 chr4 79808463 - Exonic hg19 PRAD TCGA-CH-5763-01A 8 6 Out-of-frame Intra-chr q21.3 Oncogene q21.21 Seq+ 57128 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFF1-PTPN13 AFF1 chr4 87869723 - PTPN13 chr4 87556405 + Exonic hg19 LUAD TCGA-05-4249-01A 3 4 5'UTR-5'UTR Intra-chr q21.3 Oncogene q21.3 Tumor suppressor gene Seq+ 57129 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFF1-PTPN13 AFF1 chr4 87928576 - PTPN13 chr4 87718027 + Exonic hg19 BLCA TCGA-4Z-AA7Q-01A 3 1 Out-of-frame Intra-chr q21.3 Oncogene q21.3 Tumor suppressor gene Seq+ 57130 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFF1-PTPN13 AFF1 chr4 87869723 - PTPN13 chr4 87718027 + Exonic hg19 BLCA TCGA-4Z-AA87-01A 43 46 Out-of-frame Intra-chr q21.3 Oncogene q21.3 Tumor suppressor gene Seq+ 57131 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFF1-PTPN13 AFF1 chr4 87869723 - PTPN13 chr4 87556405 + Exonic hg19 LUSC TCGA-60-2695-01A 2 1 5'UTR-5'UTR Intra-chr q21.3 Oncogene q21.3 Tumor suppressor gene Seq+ 57132 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFF1-PTPN13 AFF1 chr4 87869723 - PTPN13 chr4 87637683 + Exonic hg19 BLCA TCGA-DK-A1AD-01A 11 5 Out-of-frame Intra-chr q21.3 Oncogene q21.3 Tumor suppressor gene Seq+ 57133 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFF1-PTPN13 AFF1 chr4 88046295 - PTPN13 chr4 87720254 + Exonic hg19 BLCA TCGA-E7-A6MD-01A 21 11 In-Frame Intra-chr q21.3 Oncogene q21.3 Tumor suppressor gene Seq+ 57134 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFF1-PTPN13 AFF1 chr4 88048855 - PTPN13 chr4 87718027 + Exonic hg19 CESC TCGA-EA-A5ZD-01A 261 148 In-Frame Intra-chr q21.3 Oncogene q21.3 Tumor suppressor gene Seq+ 57135 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFF1-PTPN13 AFF1 chr4 88048855 - PTPN13 chr4 87666119 + Exonic hg19 BLCA TCGA-GC-A3BM-01A 15 3 In-Frame Intra-chr q21.3 Oncogene q21.3 Tumor suppressor gene Seq+ 57136 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFF1-RBFOX1 AFF1 chr4 87968746 - RBFOX1 chr16 7102058 + Exonic hg19 PRAD TCGA-KC-A4BV-01A 21 5 CDS-5'UTR Inter-chr q21.3 Oncogene p13.3 Seq+ 57137 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFF1-WWOX AFF1 chr4 88036451 - WWOX chr16 79245505 + Exonic hg19 SARC TCGA-DX-AB35-01A 7 2 In-Frame Inter-chr q21.3 Oncogene q23.1 Tumor suppressor gene Seq+ 57138 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFF3-ASZ1 AFF3 chr2 100453939 - ASZ1 chr7 117066989 - Exonic hg19 BRCA TCGA-AC-A2QH-01B 9 2 In-Frame Inter-chr q11.2 Oncogene q31.2 57139 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFF3-HDAC5 AFF3 chr2 100623094 - HDAC5 chr17 42171202 - Exonic hg19 PRAD TCGA-YL-A8HO-01A 2 3 Out-of-frame Inter-chr q11.2 Oncogene q21.31 Seq+ 57140 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFF3-NPAS2 AFF3 chr2 100623094 - NPAS2 chr2 101604541 + Exonic hg19 LUAD TCGA-97-8174-01A 6 4 In-Frame Intra-chr q11.2 Oncogene q11.2 Tumor suppressor gene Transcription factor Seq+ 57141 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFF3-TMEM182 AFF3 chr2 100209657 - TMEM182 chr2 103379046 + Exonic hg19 BRCA TCGA-B6-A0IH-01A 3 1 In-Frame Intra-chr q11.2 Oncogene q12.1 Seq+ 57142 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFF4-FSTL4 AFF4 chr5 132227856 - FSTL4 chr5 132561511 - Exonic hg19 BRCA TCGA-E2-A1LE-01A 5 3 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 57143 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFF4-SNTG2 AFF4 chr5 132227856 - SNTG2 chr2 1204789 + Exonic hg19 PRAD TCGA-TK-A8OK-01A 19 10 In-Frame Inter-chr q31.1 Seq+ 57144 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFF4-SPATA21 AFF4 chr5 132298951 - SPATA21 chr1 16757917 - Exonic hg19 ESCA TCGA-LN-A49M-01A 3 18 5'UTR-5'UTR Inter-chr q31.1 p36.13 Seq+ 57145 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFG3L2-TIAM1 AFG3L2 chr18 12337340 - TIAM1 chr21 32503266 - Exonic hg19 LUAD TCGA-O1-A52J-01A 2 3 Out-of-frame Inter-chr p11.21 q22.11 Seq+ 57146 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFMID-TMC8 AFMID chr17 76198832 - TMC8 chr17 76136915 + Exonic hg19 STAD TCGA-BR-8361-01A 6 20 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 57147 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFMID-TNRC6C AFMID chr17 76187141 - TNRC6C chr17 76060803 + Exonic hg19 LUAD TCGA-38-4630-01A 19 19 In-Frame Intra-chr q25.3 q25.3 Seq+ 57148 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFTPH-ELF1 AFTPH chr2 64796813 - ELF1 chr13 41556418 - Exonic hg19 READ TCGA-G5-6235-01A 4 3 CDS-5'UTR Inter-chr p14 q14.11 Transcription factor Seq+ 57149 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFTPH-GLYATL3 AFTPH chr2 64796813 - GLYATL3 chr6 49479665 + Exonic hg19 LUSC TCGA-98-8023-01A 30 22 Out-of-frame Inter-chr p14 p12.3 Seq+ 57150 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFTPH-KIAA1841 AFTPH chr2 64751746 - KIAA1841 chr2 61343114 + Exonic hg19 LGG TCGA-DU-A7TJ-01A 56 51 5'UTR-CDS Intra-chr p14 p15 Seq+ 57151 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AFTPH-THRB AFTPH chr2 64812679 - THRB chr3 24193981 - Exonic hg19 KIRC TCGA-CJ-5681-01A 3 3 Out-of-frame Inter-chr p14 p24.2 Tumor suppressor gene Transcription factor Seq+ 57152 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP1-AANAT AGAP1 chr2 236403493 - AANAT chr17 74464754 + Exonic hg19 LUSC TCGA-39-5034-01A 8 4 Out-of-frame Inter-chr q37.2 q25.1 Seq+ 57153 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP1-AC112715.2 AGAP1 chr2 236792093 - AC112715.2 chr2 238165734 + Exonic hg19 PRAD TCGA-EJ-7318-01B 2 5 Out-of-frame Intra-chr q37.2 57154 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP1-AC131097.4 AGAP1 chr2 236706530 - AC131097.4 chr2 242839485 - Exonic hg19 SARC TCGA-N1-A6IA-01A 2 3 Out-of-frame Intra-chr q37.2 q37.3 57155 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP1-ADAMTS2 AGAP1 chr2 236653483 - ADAMTS2 chr5 178553131 - Exonic hg19 PRAD TCGA-HI-7168-01A 4 3 In-Frame Inter-chr q37.2 57156 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP1-ATG4B AGAP1 chr2 236403493 - ATG4B chr2 242590425 + Exonic hg19 SARC TCGA-DX-A3U7-01A 15 4 In-Frame Intra-chr q37.2 q37.3 Seq+ 57157 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP1-C1orf115 AGAP1 chr2 236877267 - C1orf115 chr1 220869954 + Exonic hg19 ESCA TCGA-2H-A9GF-01A 3 22 Out-of-frame Inter-chr q37.2 q41 Seq+ 57158 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP1-CIR1 AGAP1 chr2 236715975 - CIR1 chr2 175252507 - Exonic hg19 COAD TCGA-AY-5543-01A 76 22 In-Frame Intra-chr q37.2 q31.1 Seq+ 57159 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP1-ERBB4 AGAP1 chr2 236715975 - ERBB4 chr2 212289026 - Exonic hg19 PAAD TCGA-L1-A7W4-01A 3 2 Out-of-frame Intra-chr q37.2 q34 Oncogene Tumor suppressor gene 57160 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP1-FAM164A AGAP1 chr2 236403493 - FAM164A chr8 79627456 + Exonic hg19 BRCA TCGA-AR-A2LR-01A 6 15 Out-of-frame Inter-chr q37.2 57161 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP1-IGSF21 AGAP1 chr2 236659132 - IGSF21 chr1 18554392 + Exonic hg19 LGG TCGA-DU-8161-01A 35 23 In-Frame Inter-chr q37.2 p36.13 Seq+ 57162 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP1-PACRG AGAP1 chr2 236792093 - PACRG chr6 163735859 + Exonic hg19 UCEC TCGA-A5-A1OH-01A 44 38 Out-of-frame Inter-chr q37.2 q26 Tumor suppressor gene Seq+ 57163 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP1-RHOU AGAP1 chr2 236403493 - RHOU chr1 228879032 + Exonic hg19 PRAD TCGA-Y6-A9XI-01A 4 5 Out-of-frame Inter-chr q37.2 q42.13 Seq+ 57164 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP1-RINT1 AGAP1 chr2 236792093 - RINT1 chr7 105204180 + Exonic hg19 BRCA TCGA-A7-A0DA-01A 28 33 In-Frame Inter-chr q37.2 q22.3 Tumor suppressor gene Seq+ 57165 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP1-SNX1 AGAP1 chr2 236957925 - SNX1 chr15 64404772 + Exonic hg19 SARC TCGA-FX-A3TO-01A 4 5 Out-of-frame Inter-chr q37.2 q22.31 Seq+ 57166 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP1-SP140L AGAP1 chr2 236403493 - SP140L chr2 231261472 + Exonic hg19 PRAD TCGA-J9-A8CL-01A 2 6 Out-of-frame Intra-chr q37.2 q37.1 Transcription factor Seq+ 57167 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP1-SPATA6 AGAP1 chr2 236817550 - SPATA6 chr1 48764565 - Exonic hg19 CESC TCGA-EK-A2PM-01A 2 2 Out-of-frame Inter-chr q37.2 p33 57168 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP1-TRHDE AGAP1 chr2 236403493 - TRHDE chr12 72936071 + Exonic hg19 SARC TCGA-DX-AB2H-01A 3 4 Out-of-frame Inter-chr q37.2 q21.1 57169 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP1-UBE2F AGAP1 chr2 236403493 - UBE2F chr2 238881734 + Exonic hg19 HNSC TCGA-CR-6484-01A 37 17 CDS-5'UTR Intra-chr q37.2 q37.3 Seq+ 57170 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP1-USP40 AGAP1 chr2 236659132 - USP40 chr2 234389943 - Exonic hg19 HNSC TCGA-CQ-6222-01A 2 1 Out-of-frame Intra-chr q37.2 q37.1 57171 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP1-WDR11 AGAP1 chr2 236403493 - WDR11 chr10 122659541 + Exonic hg19 BRCA TCGA-A8-A08O-01A 26 21 In-Frame Inter-chr q37.2 q26.12 Tumor suppressor gene Seq+ 57172 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP2-CNOT2 AGAP2 chr12 58125149 - CNOT2 chr12 70729218 + Exonic hg19 SARC TCGA-DX-A6BG-01A 4 4 Out-of-frame Intra-chr q14.1 q15 Seq+ 57173 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP2-CYP27B1 AGAP2 chr12 58127809 - CYP27B1 chr12 58159980 - Exonic hg19 GBM TCGA-12-1597-01B 32 59 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 57174 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP2-PGC AGAP2 chr12 58129152 - PGC chr6 41704742 - Exonic hg19 SARC TCGA-DX-A23T-01A 2 3 In-Frame Inter-chr q14.1 p21.1 57175 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP2-RAB21 AGAP2 chr12 58123422 - RAB21 chr12 72179311 + Exonic hg19 SARC TCGA-3B-A9HS-01A 5 2 In-Frame Intra-chr q14.1 q21.1 Seq+ 57176 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP2-TMEM67 AGAP2 chr12 58123422 - TMEM67 chr8 94827533 + Exonic hg19 GBM TCGA-06-0178-01A 43 44 In-Frame Inter-chr q14.1 q22.1 Seq+ 57177 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP3-EXOSC9 AGAP3 chr7 150784159 - EXOSC9 chr4 122722982 + Exonic hg19 SARC TCGA-DX-A8BR-01A 84 63 Out-of-frame Inter-chr q36.1 q27 Seq+ 57178 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP3-GIMAP1 AGAP3 chr7 150784159 - GIMAP1 chr7 150416130 + Exonic hg19 BRCA TCGA-AQ-A54N-01A 3 2 CDS-5'UTR Intra-chr q36.1 q36.1 57179 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP3-GIMAP2 AGAP3 chr7 150784159 - GIMAP2 chr7 150384140 + Exonic hg19 BRCA TCGA-AQ-A54N-01A 3 4 CDS-5'UTR Intra-chr q36.1 q36.1 Seq+ 57180 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP3-GRM3 AGAP3 chr7 150784159 - GRM3 chr7 86479686 + Exonic hg19 LUSC TCGA-68-8250-01A 2 1 Out-of-frame Intra-chr q36.1 q21.11 57181 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP3-RELN AGAP3 chr7 150784159 - RELN chr7 103191743 - Exonic hg19 LUSC TCGA-68-8250-01A 18 6 Out-of-frame Intra-chr q36.1 q22.1 Seq+ 57182 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGAP3-TG AGAP3 chr7 150784159 - TG chr8 133948001 + Exonic hg19 BRCA TCGA-BH-A1F0-01A 8 12 Out-of-frame Inter-chr q36.1 q24.22 Seq+ 57183 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGBL4-DTL AGBL4 chr1 50489435 - DTL chr1 212216335 + Exonic hg19 LUAD TCGA-49-4501-01A 2 2 In-Frame Intra-chr p33 q32.3 57184 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGBL4-FAF1 AGBL4 chr1 50489435 - FAF1 chr1 51121200 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 2 1 Out-of-frame Intra-chr p33 p32.3 Seq+ 57185 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGBL4-FAF1 AGBL4 chr1 50489435 - FAF1 chr1 51121200 - Exonic hg19 UCEC TCGA-B5-A3FD-01A 5 2 Out-of-frame Intra-chr p33 p32.3 Seq+ 57186 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGBL4-FAF1 AGBL4 chr1 50489435 - FAF1 chr1 51210447 - Exonic hg19 COAD TCGA-CK-4952-01A 12 4 In-Frame Intra-chr p33 p32.3 Seq+ 57187 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGBL4-FAF1 AGBL4 chr1 49511256 - FAF1 chr1 50907195 - Exonic hg19 PRAD TCGA-V1-A8MF-01A 6 6 In-Frame Intra-chr p33 p32.3 Seq+ 57188 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGFG1-CCDC169 AGFG1 chr2 228356356 - CCDC169 chr13 36822819 - Exonic hg19 PRAD TCGA-VP-A872-01A 2 1 In-Frame Inter-chr q36.3 q13.3 57189 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGFG1-MFF AGFG1 chr2 228337304 - MFF chr2 228220393 + Exonic hg19 LUSC TCGA-43-8116-01A 6 5 In-Frame Intra-chr q36.3 q36.3 Seq+ 57190 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGFG1-MFF AGFG1 chr2 228389631 - MFF chr2 228220393 + Exonic hg19 LUAD TCGA-62-A471-01A 183 129 Out-of-frame Intra-chr q36.3 q36.3 Seq+ 57191 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGFG1-TET3 AGFG1 chr2 228356356 - TET3 chr2 74320029 + Exonic hg19 PRAD TCGA-EJ-7315-01A 2 1 In-Frame Intra-chr q36.3 p13.1 Transcription factor 57192 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGFG2-COPS6 AGFG2 chr7 100151881 - COPS6 chr7 99689272 + Exonic hg19 LIHC TCGA-BC-A10R-01A 5 3 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 57193 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGK-BRAF AGK chr7 141255367 - BRAF chr7 140494267 - Exonic hg19 SKCM TCGA-DA-A1IA-06A 3 1 In-Frame Intra-chr q34 TKL:RAF Oncogene KB Pub Seq+ 57194 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGK-BRAF AGK chr7 141255367 - BRAF chr7 140494267 - Exonic hg19 THCA TCGA-DJ-A2PX-01A 5 1 In-Frame Intra-chr q34 TKL:RAF Oncogene KB Pub Seq+ 57195 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGL-ARHGDIB AGL chr1 100382287 - ARHGDIB chr12 15103658 - Exonic hg19 PRAD TCGA-J4-AATZ-01A 14 1 CDS-5'UTR Inter-chr p21.2 p12.3 Seq+ 57196 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGMO-MEOX2 AGMO chr7 15433738 - MEOX2 chr7 15666543 - Exonic hg19 LIHC TCGA-2Y-A9H4-01A 4 3 In-Frame Intra-chr p21.2 p21.2 Transcription factor Seq+ 57197 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGMO-MEOX2 AGMO chr7 15584397 - MEOX2 chr7 15666543 - Exonic hg19 CESC TCGA-VS-A9UZ-01A 37 21 In-Frame Intra-chr p21.2 p21.2 Transcription factor Seq+ 57198 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGPAT1-HECA AGPAT1 chr6 32143591 - HECA chr6 139487421 + Exonic hg19 LGG TCGA-TM-A7CF-01A 8 4 5'UTR-CDS Intra-chr q24.1 Tumor suppressor gene Seq+ 57199 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGPAT2-CDC42SE1 AGPAT2 chr9 139571413 - CDC42SE1 chr1 151027602 - Exonic hg19 BRCA TCGA-BH-A0C0-01A 30 42 In-Frame Inter-chr q34.3 q21.3 Seq+ 57200 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGPAT3-ELK4 AGPAT3 chr21 45391371 - ELK4 chr1 205569922 - Exonic hg19 PRAD TCGA-XJ-A9DQ-01A 6 7 Out-of-frame Inter-chr q22.3 q32.1 Transcription factor Seq+ 57201 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGPAT3-KSR1 AGPAT3 chr21 45323900 - KSR1 chr17 25915501 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 9 21 Out-of-frame Inter-chr q22.3 q11.2 TKL:RAF Seq+ 57202 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGPAT3-PDE9A AGPAT3 chr21 45323900 - PDE9A chr21 44106302 + Exonic hg19 UCEC TCGA-AX-A3G6-01A 17 11 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 57203 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGPAT3-PDXK AGPAT3 chr21 45323900 - PDXK chr21 45153950 + Exonic hg19 BRCA TCGA-A8-A07O-01A 8 25 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 57204 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGPAT3-PDXK AGPAT3 chr21 45323900 - PDXK chr21 45153950 + Exonic hg19 STAD TCGA-CD-8535-01A 4 45 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 57205 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGPAT3-RRP1 AGPAT3 chr21 45323900 - RRP1 chr21 45211231 + Exonic hg19 LIHC TCGA-BC-A216-01A 19 13 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 57206 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGPAT5-KCNU1 AGPAT5 chr8 6599272 - KCNU1 chr8 36721922 + Exonic hg19 HNSC TCGA-CV-7446-01A 2 3 In-Frame Intra-chr p23.1 p11.23 57207 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGPAT5-PRSS55 AGPAT5 chr8 6566408 - PRSS55 chr8 10387017 + Exonic hg19 PRAD TCGA-HC-7080-01A 6 7 Out-of-frame Intra-chr p23.1 p23.1 Seq+ 57208 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGPAT6-ADAM9 AGPAT6 chr8 41456823 - ADAM9 chr8 38899465 + Exonic hg19 PRAD TCGA-EJ-5522-01A 30 36 Out-of-frame Intra-chr Seq+ 57209 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGPAT9-COPS4 AGPAT9 chr4 84465755 - COPS4 chr4 83987591 + Exonic hg19 SARC TCGA-K1-A6RV-01A 37 20 In-Frame Intra-chr q21.22 Seq+ 57210 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGPHD1-DNAJA4 AGPHD1 chr15 78819905 - DNAJA4 chr15 78567840 + Exonic hg19 LIHC TCGA-FV-A496-01A 2 2 In-Frame Intra-chr q25.1 57211 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGPS-PDE11A AGPS chr2 178299145 - PDE11A chr2 178576606 - Exonic hg19 LIHC TCGA-FV-A496-01A 2 2 In-Frame Intra-chr q31.2 q31.2 57212 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGPS-PHOCN AGPS chr2 178378636 - PHOCN chr2 198404835 + Exonic hg19 HNSC TCGA-DQ-7594-01A 2 3 Out-of-frame Intra-chr q31.2 57213 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGPS-ZNF385B AGPS chr2 178370303 - ZNF385B chr2 180409696 - Exonic hg19 LIHC TCGA-FV-A3I1-01A 2 3 Out-of-frame Intra-chr q31.2 q31.3 Transcription factor Seq+ 57214 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGR2-ANKS1A AGR2 chr7 16832266 - ANKS1A chr6 34977682 + Exonic hg19 BRCA TCGA-B6-A0RV-01A 2 8 Out-of-frame Inter-chr p21.1 p21.31 57215 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGR2-ANXA1 AGR2 chr7 16832266 - ANXA1 chr9 75772570 + Exonic hg19 CESC TCGA-IR-A3LB-01A 2 87 Out-of-frame Inter-chr p21.1 q21.13 Tumor suppressor gene 57216 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGR2-EIF2AK2 AGR2 chr7 16832266 - EIF2AK2 chr2 37342384 - Exonic hg19 LUAD TCGA-NJ-A55O-01A 2 94 Out-of-frame Inter-chr p21.1 p22.2 57217 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGRN-BAD AGRN chr1 957842 - BAD chr11 64039275 - Exonic hg19 CESC TCGA-UC-A7PD-01A 72 31 In-Frame Inter-chr p36.33 q13.1 Seq+ 57218 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGRN-NOC4L AGRN chr1 970704 - NOC4L chr12 132635526 + Exonic hg19 LUSC TCGA-39-5029-01A 2 3 In-Frame Inter-chr p36.33 q24.33 Seq+ 57219 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGRN-NOC4L AGRN chr1 970704 - NOC4L chr12 132635526 + Exonic hg19 BRCA TCGA-BH-A0DK-01A 2 2 In-Frame Inter-chr p36.33 q24.33 Seq+ 57220 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGRN-SIAE AGRN chr1 991492 - SIAE chr11 124543777 - Exonic hg19 KIRP TCGA-EV-5902-01A 2 8 3'UTR-5'UTR Inter-chr p36.33 q24.2 57221 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGRN-ZC3H18 AGRN chr1 980903 - ZC3H18 chr16 88664586 + Exonic hg19 ESCA TCGA-R6-A8W5-01B 20 177 In-Frame Inter-chr p36.33 q24.2 Seq+ 57222 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AGTPBP1-DAPK1 AGTPBP1 chr9 88356690 - DAPK1 chr9 90252858 + Exonic hg19 SARC TCGA-K1-A6RU-01A 2 3 5'UTR-CDS Intra-chr q21.33 q21.33 CAMK:DAPK Tumor suppressor gene Seq+ 57223 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHCYL1-DENND2D AHCYL1 chr1 110527794 - DENND2D chr1 111737348 - Exonic hg19 BRCA TCGA-E9-A5FK-01A 4 5 In-Frame Intra-chr p13.3 Tumor suppressor gene p13.2 Tumor suppressor gene Seq+ 57224 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHCYL1-GNAI3 AHCYL1 chr1 110527794 - GNAI3 chr1 110125059 + Exonic hg19 STAD TCGA-BR-8060-01A 15 45 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p13.3 Seq+ 57225 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHCYL1-LRRIQ3 AHCYL1 chr1 110527794 - LRRIQ3 chr1 74575237 - Exonic hg19 LUAD TCGA-80-5611-01A 3 2 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p31.1 Seq+ 57226 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHCYL2-IP6K2 AHCYL2 chr7 129008392 - IP6K2 chr3 48732854 - Exonic hg19 COAD TCGA-CM-4747-01A 2 3 Out-of-frame Inter-chr q32.1 p21.31 57227 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHCYL2-SND1 AHCYL2 chr7 128865280 - SND1 chr7 127714554 + Exonic hg19 PRAD TCGA-EJ-A46G-01A 5 9 In-Frame Intra-chr q32.1 q32.1 57228 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHDC1-ALCAM AHDC1 chr1 27929908 - ALCAM chr3 105238911 + Exonic hg19 LUAD TCGA-78-7153-01A 2 1 5'UTR-CDS Inter-chr p35.3 Transcription factor q13.11 57229 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHDC1-CACHD1 AHDC1 chr1 27929908 - CACHD1 chr1 65113484 + Exonic hg19 SKCM TCGA-EB-A82C-01A 6 4 5'UTR-CDS Intra-chr p35.3 Transcription factor p31.3 Seq+ 57230 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHDC1-DNAJC8 AHDC1 chr1 27929908 - DNAJC8 chr1 28537148 - Exonic hg19 SKCM TCGA-EB-A82B-01A 24 34 5'UTR-CDS Intra-chr p35.3 Transcription factor p35.3 Seq+ 57231 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHDC1-MORN1 AHDC1 chr1 27873772 - MORN1 chr1 2268289 - Exonic hg19 KIRC TCGA-B0-4690-01A 5 5 3'UTR-CDS Intra-chr p35.3 Transcription factor p36.32 Seq+ 57232 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHDC1-TAF12 AHDC1 chr1 27929908 - TAF12 chr1 28944542 - Exonic hg19 UCEC TCGA-D1-A3JP-01A 20 7 5'UTR-CDS Intra-chr p35.3 Transcription factor p35.3 Seq+ 57233 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHI1-C12orf50 AHI1 chr6 135748305 - C12orf50 chr12 88388520 - Exonic hg19 SKCM TCGA-BF-A1Q0-01A 10 19 In-Frame Inter-chr q23.3 q21.32 Seq+ 57234 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHI1-CHEK2 AHI1 chr6 135644300 - CHEK2 chr22 29121355 - Exonic hg19 BRCA TCGA-EW-A1IX-01A 9 4 In-Frame Inter-chr q23.3 q12.1 Oncogene Tumor suppressor gene Seq+ 57235 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHI1-MYB AHI1 chr6 135679270 - MYB chr6 135539002 + Exonic hg19 BRCA TCGA-A2-A3XS-01A 34 27 In-Frame Intra-chr q23.3 q23.3 Oncogene Transcription factor Seq+ 57236 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHNAK-BIRC6 AHNAK chr11 62283375 - BIRC6 chr2 32820101 + Exonic hg19 SKCM TCGA-EE-A2GT-06A 2 16 3'UTR-CDS Inter-chr q12.3 Tumor suppressor gene p22.3 57237 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHNAK-DPF2 AHNAK chr11 62259204 - DPF2 chr11 65116321 + Exonic hg19 LUSC TCGA-85-8276-01A 15 7 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q13.1 Seq+ 57238 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHNAK-EIF2AK2 AHNAK chr11 62283375 - EIF2AK2 chr2 37342384 - Exonic hg19 BRCA TCGA-E2-A1B1-01A 2 14 Out-of-frame Inter-chr q12.3 Tumor suppressor gene p22.2 57239 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHNAK-NXF1 AHNAK chr11 62302475 - NXF1 chr11 62560173 - Exonic hg19 LUSC TCGA-NC-A5HH-01A 46 12 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q12.3 Seq+ 57240 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHNAK-RPS6KA4 AHNAK chr11 62259204 - RPS6KA4 chr11 64132773 + Exonic hg19 BRCA TCGA-A8-A09E-01A 11 8 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q13.1 Seq+ 57241 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHNAK-STIP1 AHNAK chr11 62314132 - STIP1 chr11 63960550 + Exonic hg19 LUAD TCGA-97-7937-01A 35 25 5'UTR-CDS Intra-chr q12.3 Tumor suppressor gene q13.1 Seq+ 57242 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHNAK-SUPT16H AHNAK chr11 62283375 - SUPT16H chr14 21829491 - Exonic hg19 HNSC TCGA-CR-6474-01A 2 7 Out-of-frame Inter-chr q12.3 Tumor suppressor gene q11.2 57243 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHNAK-TYK2 AHNAK chr11 62283375 - TYK2 chr19 10491352 - Exonic hg19 LAML TCGA-AB-2835-03A 2 18 Out-of-frame Inter-chr q12.3 Tumor suppressor gene p13.2 TK:JakA 57244 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHNAK-ZNF827 AHNAK chr11 62283375 - ZNF827 chr4 146859787 - Exonic hg19 BRCA TCGA-AC-A23H-01A 2 2 Out-of-frame Inter-chr q12.3 Tumor suppressor gene q31.22 Transcription factor 57245 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHNAK-ZNFX1 AHNAK chr11 62283375 - ZNFX1 chr20 47863418 - Exonic hg19 PRAD TCGA-EJ-7784-01A 2 24 Out-of-frame Inter-chr q12.3 Tumor suppressor gene q13.13 57246 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHR-CDK14 AHR chr7 17338953 - CDK14 chr7 90741857 + Exonic hg19 BRCA TCGA-AN-A0FY-01A 4 2 In-Frame Intra-chr p21.1 Tumor suppressor gene Transcription factor q21.13 Seq+ 57247 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHR-CUL4B AHR chr7 17338953 - CUL4B chrX 119708485 - Exonic hg19 SKCM TCGA-FS-A1ZZ-06A 14 9 CDS-5'UTR Inter-chr p21.1 Tumor suppressor gene Transcription factor q24 Seq+ 57248 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHR-TSPAN13 AHR chr7 17338953 - TSPAN13 chr7 16815836 + Exonic hg19 BLCA TCGA-XF-A9T0-01A 76 44 Out-of-frame Intra-chr p21.1 Tumor suppressor gene Transcription factor p21.1 Tumor suppressor gene Seq+ 57249 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHRR-AVIL AHRR chr5 376831 - AVIL chr12 58193703 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 13 4 In-Frame Inter-chr p15.33 Tumor suppressor gene Transcription factor q14.1 Seq+ 57250 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHRR-CSNK1E AHRR chr5 376831 - CSNK1E chr22 38732711 - Exonic hg19 SKCM TCGA-D3-A1Q3-06A 60 35 Out-of-frame Inter-chr p15.33 Tumor suppressor gene Transcription factor q13.1 Seq+ 57251 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHSA2-C2orf74 AHSA2 chr2 61413632 - C2orf74 chr2 61389977 + Exonic hg19 ACC TCGA-OR-A5KY-01A 5 1 Out-of-frame Intra-chr p15 p15 Seq+ 57252 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHSA2-C2orf74 AHSA2 chr2 61413632 - C2orf74 chr2 61391489 + Exonic hg19 LIHC TCGA-ZS-A9CF-01A 6 1 Out-of-frame Intra-chr p15 p15 Seq+ 57253 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AHSG-STAT6 AHSG chr3 186339107 - STAT6 chr12 57496773 - Exonic hg19 LIHC TCGA-EP-A2KB-01A 2 35 Out-of-frame Inter-chr q27.3 q13.3 Transcription factor 57254 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AIF1L-NRSN2 AIF1L chr9 133972250 - NRSN2 chr20 329893 + Exonic hg19 SKCM TCGA-3N-A9WC-06A 18 25 5'UTR-5'UTR Inter-chr q34.12 p13 Tumor suppressor gene Seq+ 57255 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AIF1L-SYN2 AIF1L chr9 133987050 - SYN2 chr3 12203046 + Exonic hg19 SKCM TCGA-EB-A4P0-01A 13 11 Out-of-frame Inter-chr q34.12 p25.2 Seq+ 57256 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AIM1-ARMC2 AIM1 chr6 106992572 - ARMC2 chr6 109294560 + Exonic hg19 BRCA TCGA-AR-A0TP-01A 15 7 Out-of-frame Intra-chr q21 Seq+ 57257 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AIM1-MYB AIM1 chr6 106808956 - MYB chr6 135513462 + Exonic hg19 BRCA TCGA-EW-A1P3-01A 11 7 5'UTR-CDS Intra-chr q23.3 Oncogene Transcription factor Seq+ 57258 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AJAP1-CYTH3 AJAP1 chr1 4715514 - CYTH3 chr7 6230162 - Exonic hg19 ACC TCGA-OR-A5J2-01A 9 1 Out-of-frame Inter-chr p36.32 Tumor suppressor gene p22.1 Seq+ 57259 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AK2-MKL1 AK2 chr1 33502337 - MKL1 chr22 40859290 - Exonic hg19 STAD TCGA-VQ-A925-01A 4 26 CDS-5'UTR Inter-chr p35.1 q13.2 Seq+ 57260 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AK3-DOCK8 AK3 chr9 4740937 - DOCK8 chr9 379771 + Exonic hg19 KIRC TCGA-BP-4983-01A 45 20 In-Frame Intra-chr p24.1 p24.3 Seq+ 57261 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AK3-IL33 AK3 chr9 4740937 - IL33 chr9 6241684 + Exonic hg19 HNSC TCGA-C9-A47Z-01A 152 144 CDS-5'UTR Intra-chr p24.1 p24.1 Seq+ 57262 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AK3-RCL1 AK3 chr9 4722506 - RCL1 chr9 4823548 + Exonic hg19 HNSC TCGA-CR-7399-01A 118 104 In-Frame Intra-chr p24.1 p24.1 Seq+ 57263 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AK5-USP33 AK5 chr1 78001723 - USP33 chr1 78167156 - Exonic hg19 CESC TCGA-WL-A834-01A 4 1 In-Frame Intra-chr p31.1 p31.1 Tumor suppressor gene 57264 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP1-ANKFN1 AKAP1 chr17 55162759 - ANKFN1 chr17 54428127 + Exonic hg19 BRCA TCGA-A8-A07I-01A 2 9 5'UTR-CDS Intra-chr q22 q22 Seq+ 57265 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP1-C17orf67 AKAP1 chr17 55184539 - C17orf67 chr17 54893371 - Exonic hg19 BRCA TCGA-E2-A15H-01A 12 6 CDS-5'UTR Intra-chr q22 q22 Seq+ 57266 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP1-GGA3 AKAP1 chr17 55162759 - GGA3 chr17 73242877 - Exonic hg19 BRCA TCGA-E2-A15H-01A 6 11 5'UTR-5'UTR Intra-chr q22 q25.1 Seq+ 57267 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP1-WIPF2 AKAP1 chr17 55162759 - WIPF2 chr17 38412643 + Exonic hg19 BRCA TCGA-A8-A09I-01A 2 10 5'UTR-5'UTR Intra-chr q22 q21.2 Seq+ 57268 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP10-C17orf39 AKAP10 chr17 19839599 - C17orf39 chr17 17962182 + Exonic hg19 PRAD TCGA-YL-A9WY-01A 12 19 In-Frame Intra-chr p11.2 57269 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP10-CCL3 AKAP10 chr17 19880905 - CCL3 chr17 34416643 - Exonic hg19 SARC TCGA-FX-A3TO-01A 13 11 In-Frame Intra-chr p11.2 Seq+ 57270 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP11-MRPS31 AKAP11 chr13 42882745 - MRPS31 chr13 41303737 - Exonic hg19 GBM TCGA-06-2558-01A 11 26 Out-of-frame Intra-chr q14.11 q14.11 Seq+ 57271 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP12-ASCC3 AKAP12 chr6 151561859 - ASCC3 chr6 101037935 - Exonic hg19 SARC TCGA-HB-A3YV-01A 25 46 Out-of-frame Intra-chr q25.1 Tumor suppressor gene q16.3 Seq+ 57272 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP13-ADAMTSL3 AKAP13 chr15 85924029 - ADAMTSL3 chr15 84651025 + Exonic hg19 BLCA TCGA-ZF-AA4T-01A 2 2 5'UTR-CDS Intra-chr q25.3 q25.2 57273 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP13-CASC4 AKAP13 chr15 86129054 - CASC4 chr15 44624186 + Exonic hg19 MESO TCGA-LK-A4NY-01A 8 22 Out-of-frame Intra-chr q25.3 q15.3 Seq+ 57274 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP13-CHD2 AKAP13 chr15 86077111 - CHD2 chr15 93555575 + Exonic hg19 LUSC TCGA-66-2758-01A 9 1 Out-of-frame Intra-chr q25.3 q26.1 Seq+ 57275 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP13-CHSY3 AKAP13 chr15 85924029 - CHSY3 chr5 129243770 + Exonic hg19 BRCA TCGA-A8-A06U-01A 3 1 5'UTR-CDS Inter-chr q25.3 q23.3 57276 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP13-IGF1R AKAP13 chr15 85924029 - IGF1R chr15 99250791 + Exonic hg19 BRCA TCGA-GM-A2DK-01A 3 3 5'UTR-CDS Intra-chr q25.3 q26.3 TK:InsR Oncogene 57277 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP13-MUSK AKAP13 chr15 86228104 - MUSK chr9 113509921 + Exonic hg19 STAD TCGA-R5-A805-01A 2 27 In-Frame Inter-chr q25.3 q31.3 TK:Musk Seq+ 57278 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP13-MYL5 AKAP13 chr15 85924029 - MYL5 chr4 675682 + Exonic hg19 LIHC TCGA-BC-A217-01A 27 20 5'UTR-CDS Inter-chr q25.3 p16.3 Seq+ 57279 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP13-NRG1 AKAP13 chr15 86087186 - NRG1 chr8 32453346 + Exonic hg19 BRCA TCGA-EW-A1P0-01A 13 3 Out-of-frame Inter-chr q25.3 p12 Seq+ 57280 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP13-NTRK3 AKAP13 chr15 86213061 - NTRK3 chr15 88576276 - Exonic hg19 LGG TCGA-DB-5277-01A 5 2 In-Frame Intra-chr q25.3 q25.3 Oncogene Tumor suppressor gene Seq+ 57281 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP13-RET AKAP13 chr15 86284726 - RET chr10 43612032 + Exonic hg19 THCA TCGA-FK-A3SG-01A 224 196 In-Frame Inter-chr q25.3 q11.21 TK:Ret Oncogene Seq+ 57282 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP13-RFX7 AKAP13 chr15 85924029 - RFX7 chr15 56379707 - Exonic hg19 HNSC TCGA-CQ-6219-01A 16 7 Out-of-frame Intra-chr q25.3 q21.3 Transcription factor Seq+ 57283 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP13-SYNE1 AKAP13 chr15 86077111 - SYNE1 chr6 152861156 - Exonic hg19 KIRP TCGA-BQ-7061-01A 7 3 In-Frame Inter-chr q25.3 q25.2 Oncogene 57284 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP2-AGTPBP1 AKAP2 chr9 112811135 - AGTPBP1 chr9 88327481 - Exonic hg19 SARC TCGA-K1-A6RU-01A 2 3 5'UTR-5'UTR Intra-chr q31.3 q21.33 Seq+ 57285 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP6-EGLN3 AKAP6 chr14 32903023 - EGLN3 chr14 34400421 - Exonic hg19 GBM TCGA-06-5413-01A 32 107 In-Frame Intra-chr q12 q13.1 Tumor suppressor gene Seq+ 57286 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP6-PRKD1 AKAP6 chr14 33069998 - PRKD1 chr14 30095762 - Exonic hg19 SKCM TCGA-EE-A181-06A 214 155 In-Frame Intra-chr q12 q12 Seq+ 57287 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP7-C6orf103 AKAP7 chr6 131540948 - C6orf103 chr6 146956511 + Exonic hg19 SKCM TCGA-FS-A1Z0-06A 4 4 Out-of-frame Intra-chr q23.2 57288 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP8-CALR3 AKAP8 chr19 15487787 - CALR3 chr19 16601381 - Exonic hg19 SARC TCGA-3B-A9HP-01A 2 1 In-Frame Intra-chr p13.12 Transcription factor p13.11 57289 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP8-VMP1 AKAP8 chr19 15469778 - VMP1 chr17 57842332 + Exonic hg19 BRCA TCGA-A8-A07L-01A 68 26 In-Frame Inter-chr p13.12 Transcription factor q23.1 Seq+ 57290 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP8L-EFCAB3 AKAP8L chr19 15507961 - EFCAB3 chr17 60472429 + Exonic hg19 BRCA TCGA-AR-A0TT-01A 8 4 Out-of-frame Inter-chr p13.12 Transcription factor q23.2 Seq+ 57291 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP8L-WIZ AKAP8L chr19 15521331 - WIZ chr19 15541993 - Exonic hg19 SKCM TCGA-EE-A20B-06A 38 12 Out-of-frame Intra-chr p13.12 Transcription factor p13.12 Transcription factor Seq+ 57292 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP9-CDK14 AKAP9 chr7 91714017 - CDK14 chr7 90708747 + Exonic hg19 LUSC TCGA-43-7658-01A 30 25 In-Frame Intra-chr q21.2 Oncogene q21.13 Seq+ 57293 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP9-RUNX1 AKAP9 chr7 91699496 - RUNX1 chr21 36171759 - Exonic hg19 BRCA TCGA-OL-A5RW-01A 3 1 Out-of-frame Inter-chr q21.2 Oncogene q22.12 Oncogene Tumor suppressor gene Transcription factor 57294 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKAP9-ZNF3 AKAP9 chr7 91570461 - ZNF3 chr7 99675056 - Exonic hg19 KIRP TCGA-B9-4116-01A 74 49 CDS-5'UTR Intra-chr q21.2 Oncogene q22.1 Transcription factor Seq+ 57295 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKD1-FAM184A AKD1 chr6 109962721 - FAM184A chr6 119345978 - Exonic hg19 BRCA TCGA-E9-A1RF-01A 7 4 In-Frame Intra-chr q22.31 57296 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKIRIN1-MEAF6 AKIRIN1 chr1 39463983 - MEAF6 chr1 37967597 - Exonic hg19 LUAD TCGA-55-6712-01A 31 13 In-Frame Intra-chr p34.3 p34.3 Seq+ 57297 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKIRIN2-ANKRD55 AKIRIN2 chr6 88411168 - ANKRD55 chr5 55479461 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 2 1 In-Frame Inter-chr q15 q11.2 Seq+ 57298 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKIRIN2-CUL7 AKIRIN2 chr6 88411168 - CUL7 chr6 43020534 - Exonic hg19 LGG TCGA-TM-A7CF-01A 3 5 In-Frame Intra-chr q15 p21.1 Seq+ 57299 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKIRIN2-FAM59A AKIRIN2 chr6 88411168 - FAM59A chr18 29850346 - Exonic hg19 SARC TCGA-DX-AB2T-01A 4 3 Out-of-frame Inter-chr q15 57300 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKNA-DFNB31 AKNA chr9 117129823 - DFNB31 chr9 117188693 - Exonic hg19 LIHC TCGA-DD-A115-01A 5 5 In-Frame Intra-chr q32 Transcription factor Seq+ 57301 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKNA-ENOX1 AKNA chr9 117150140 - ENOX1 chr13 44241680 - Exonic hg19 SARC TCGA-JV-A75J-01A 2 11 5'UTR-5'UTR Inter-chr q32 Transcription factor q14.11 Seq+ 57302 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKR1A1-EIF2C3 AKR1A1 chr1 46027550 - EIF2C3 chr1 36469942 + Exonic hg19 HNSC TCGA-F7-A61W-01A 4 5 Out-of-frame Intra-chr p34.1 57303 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKT1-ANKS1A AKT1 chr14 105235689 - ANKS1A chr6 34977682 + Exonic hg19 BLCA TCGA-FD-A3SR-01A 2 15 Out-of-frame Inter-chr q32.33 AGC:Akt Oncogene p21.31 57304 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKT2-ELK3 AKT2 chr19 40736224 - ELK3 chr12 96588323 + Exonic hg19 SKCM TCGA-EE-A2GL-06A 2 1 3'UTR-5'UTR Inter-chr q13.2 AGC:Akt Oncogene q23.1 Transcription factor 57305 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKT2-SRRM5 AKT2 chr19 40771129 - SRRM5 chr19 44101246 + Exonic hg19 LGG TCGA-E1-A7Z2-01A 24 8 CDS-5'UTR Intra-chr q13.2 AGC:Akt Oncogene q13.31 Seq+ 57306 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKT2-UPF1 AKT2 chr19 40791088 - UPF1 chr19 18956789 + Exonic hg19 LGG TCGA-P5-A5EU-01A 7 3 5'UTR-CDS Intra-chr q13.2 AGC:Akt Oncogene p13.11 Seq+ 57307 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKT2-YIF1B AKT2 chr19 40791088 - YIF1B chr19 38800283 - Exonic hg19 UCEC TCGA-BG-A3PP-01A 21 7 5'UTR-5'UTR Intra-chr q13.2 AGC:Akt Oncogene q13.2 Seq+ 57308 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKT3-ADSS AKT3 chr1 244006427 - ADSS chr1 244601070 - Exonic hg19 PRAD TCGA-ZG-A9KY-01A 15 15 CDS-5'UTR Intra-chr AGC:Akt Oncogene q44 Seq+ 57309 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKT3-C1orf150 AKT3 chr1 244006427 - C1orf150 chr1 247690242 + Exonic hg19 GBM TCGA-19-2619-01A 5 15 CDS-5'UTR Intra-chr AGC:Akt Oncogene 57310 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKT3-HEATR1 AKT3 chr1 243800913 - HEATR1 chr1 236714290 - Exonic hg19 MESO TCGA-UT-A88E-01B 88 57 Out-of-frame Intra-chr AGC:Akt Oncogene q43 Seq+ 57311 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKT3-PPP2R2A AKT3 chr1 244006427 - PPP2R2A chr8 26211984 + Exonic hg19 PRAD TCGA-KK-A8IL-01A 13 8 Out-of-frame Inter-chr AGC:Akt Oncogene p21.2 Seq+ 57312 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKT3-PTPRR AKT3 chr1 243776973 - PTPRR chr12 71078044 - Exonic hg19 SKCM TCGA-ER-A197-06A 11 12 In-Frame Inter-chr AGC:Akt Oncogene q15 Seq+ 57313 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AKT3-RGS7 AKT3 chr1 244006427 - RGS7 chr1 240990472 - Exonic hg19 GBM TCGA-06-0216-01B 6 12 Out-of-frame Intra-chr AGC:Akt Oncogene q43 57314 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AL021546.1-PXN AL021546.1 chr12 120884632 - PXN chr12 120653464 - Exonic hg19 UCEC TCGA-A5-A2K2-01A 12 1 Out-of-frame Intra-chr q24.31 q24.23 57315 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AL109749.1-AIFM1 AL109749.1 chrX 131157687 - AIFM1 chrX 129290577 - Exonic hg19 BRCA TCGA-BH-A0WA-01A 2 2 Out-of-frame Intra-chr q26.1 57316 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AL109749.1-ZC4H2 AL109749.1 chrX 131207121 - ZC4H2 chrX 64141868 - Exonic hg19 BRCA TCGA-GI-A2C9-01A 12 3 Out-of-frame Intra-chr q11.2 57317 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AL137003.1-GLDN AL137003.1 chr6 16753464 - GLDN chr15 51669646 + Exonic hg19 PRAD TCGA-HC-7736-01A 4 1 Out-of-frame Inter-chr p22.3 q21.2 57318 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AL137003.1-PPIL1 AL137003.1 chr6 16753464 - PPIL1 chr6 36839648 - Exonic hg19 LIHC TCGA-CC-A3M9-01A 20 1 Out-of-frame Intra-chr p22.3 p21.2 57319 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AL137003.1-PTPRK AL137003.1 chr6 16753464 - PTPRK chr6 128411137 - Exonic hg19 BRCA TCGA-E2-A155-01A 56 15 Out-of-frame Intra-chr p22.3 Tumor suppressor gene 57320 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AL139022.1-CCNA2 AL139022.1 chr14 65453815 - CCNA2 chr4 122743801 - Exonic hg19 STAD TCGA-BR-8687-01A 2 3 Out-of-frame Inter-chr q23.3 q27 57321 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AL139022.1-PEBP4 AL139022.1 chr14 65453815 - PEBP4 chr8 22584733 - Exonic hg19 BRCA TCGA-A2-A1FV-01A 8 1 Out-of-frame Inter-chr q23.3 p21.3 57322 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AL139022.1-RAB15 AL139022.1 chr14 65453815 - RAB15 chr14 65419289 - Exonic hg19 BRCA TCGA-A8-A09R-01A 6 2 Out-of-frame Intra-chr q23.3 q23.3 57323 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AL139289.1-WDR65 AL139289.1 chr1 43870221 - WDR65 chr1 43672391 + Exonic hg19 CESC TCGA-VS-A9V0-01A 2 1 Out-of-frame Intra-chr p34.2 57324 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AL353715.1-STMN3 AL353715.1 chr20 62305446 - STMN3 chr20 62275662 - Exonic hg19 PRAD TCGA-G9-7510-01A 35 16 Out-of-frame Intra-chr q13.33 57325 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AL359075.1-EGF AL359075.1 chr1 177927267 - EGF chr4 110914403 + Exonic hg19 PRAD TCGA-VP-A87K-01A 4 3 Out-of-frame Inter-chr q25.2 q25 57326 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AL360181.1-ZNF350 AL360181.1 chr10 135216277 - ZNF350 chr19 52477784 - Exonic hg19 STAD TCGA-HU-A4H6-01A 2 8 Out-of-frame Inter-chr q26.3 q13.41 Transcription factor 57327 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALAS1-PARP3 ALAS1 chr3 52232271 - PARP3 chr3 51981756 + Exonic hg19 LUSC TCGA-85-8479-01A 2 1 5'UTR-CDS Intra-chr p21.2 p21.2 57328 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALAS1-RBM6 ALAS1 chr3 52242263 - RBM6 chr3 50112634 + Exonic hg19 UCEC TCGA-B5-A5OD-01A 38 80 Out-of-frame Intra-chr p21.2 p21.31 Tumor suppressor gene Seq+ 57329 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALB-AC008537.4 ALB chr4 74282070 - AC008537.4 chr19 41454958 + Exonic hg19 LIHC TCGA-5R-AAAM-01A 1493 4374 Out-of-frame Inter-chr q13.3 q13.2 57330 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALB-ARFGEF2 ALB chr4 74286971 - ARFGEF2 chr20 47615777 + Exonic hg19 LIHC TCGA-XR-A8TD-01A 2 666 Out-of-frame Inter-chr q13.3 q13.13 57331 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALB-DDX21 ALB chr4 74286971 - DDX21 chr10 70723858 + Exonic hg19 LIHC TCGA-DD-AADD-01A 2 120 Out-of-frame Inter-chr q13.3 q22.1 57332 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALB-EXOSC9 ALB chr4 74270123 - EXOSC9 chr4 122737927 + Exonic hg19 KIRP TCGA-SX-A7SS-01A 4 2 Out-of-frame Intra-chr q13.3 q27 Seq+ 57333 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALB-EXOSC9 ALB chr4 74270123 - EXOSC9 chr4 122737927 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 1402 1930 Out-of-frame Intra-chr q13.3 q27 Seq+ 57334 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALB-FOXP1 ALB chr4 74286971 - FOXP1 chr3 71007472 - Exonic hg19 LIHC TCGA-BC-4072-01B 2 2 Out-of-frame Inter-chr q13.3 p13 Oncogene Tumor suppressor gene Transcription factor 57335 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALB-PLEKHA5 ALB chr4 74286971 - PLEKHA5 chr12 19441012 + Exonic hg19 LIHC TCGA-ED-A459-01A 2 261 Out-of-frame Inter-chr q13.3 p12.3 57336 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALB-SEC63 ALB chr4 74286971 - SEC63 chr6 108214782 - Exonic hg19 LIHC TCGA-DD-A3A8-01A 2 1 Out-of-frame Inter-chr q13.3 q21 57337 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALB-SQSTM1 ALB chr4 74286971 - SQSTM1 chr5 179250858 + Exonic hg19 LIHC TCGA-DD-A3A7-01A 3 1 3'UTR-CDS Inter-chr q13.3 q35.3 57338 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALB-TLN1 ALB chr4 74286973 - TLN1 chr9 35720506 - Exonic hg19 LIHC TCGA-G3-A7M6-01A 3 1 3'UTR-CDS Inter-chr q13.3 p13.3 57339 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALB-UBAC1 ALB chr4 74286971 - UBAC1 chr9 138839751 - Exonic hg19 LIHC TCGA-G3-A25X-01A 2 2 3'UTR-CDS Inter-chr q13.3 q34.3 57340 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALCAM-EIF2A ALCAM chr3 105086325 - EIF2A chr3 150270143 + Exonic hg19 BRCA TCGA-C8-A12L-01A 88 72 In-Frame Intra-chr q13.11 q25.1 Seq+ 57341 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALCAM-SH3KBP1 ALCAM chr3 105086325 - SH3KBP1 chrX 19606920 - Exonic hg19 BLCA TCGA-GV-A3QH-01A 67 37 In-Frame Inter-chr q13.11 p22.12 Seq+ 57342 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALCAM-YIF1B ALCAM chr3 105086325 - YIF1B chr19 38800283 - Exonic hg19 BRCA TCGA-BH-A0BP-01A 22 16 In-Frame Inter-chr q13.11 q13.2 Seq+ 57343 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDH1A1-FXYD1 ALDH1A1 chr9 75538935 - FXYD1 chr19 35630980 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 30 19 CDS-5'UTR Inter-chr q21.13 q13.12 Seq+ 57344 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDH1A1-TYK2 ALDH1A1 chr9 75515578 - TYK2 chr19 10491352 - Exonic hg19 KIRP TCGA-DW-7839-01A 2 1 3'UTR-5'UTR Inter-chr q21.13 p13.2 TK:JakA 57345 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDH1A3-VPS53 ALDH1A3 chr15 101456831 - VPS53 chr17 505136 - Exonic hg19 PRAD TCGA-HC-7744-01A 2 4 3'UTR-CDS Inter-chr q26.3 Tumor suppressor gene 57346 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDH2-LIN7A ALDH2 chr12 112204900 - LIN7A chr12 81242101 - Exonic hg19 SARC TCGA-3B-A9HO-01A 2 7 In-Frame Intra-chr q24.12 q21.31 57347 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDH2-LRBA ALDH2 chr12 112237867 - LRBA chr4 151793907 - Exonic hg19 LUSC TCGA-85-A50Z-01A 5 2 In-Frame Inter-chr q24.12 q31.3 Seq+ 57348 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDH3A1-MYH9 ALDH3A1 chr17 19651572 - MYH9 chr22 36723533 - Exonic hg19 LUSC TCGA-33-6737-01A 15 120 5'UTR-CDS Inter-chr p11.2 q12.3 Oncogene Tumor suppressor gene Seq+ 57349 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDH3A1-NF1 ALDH3A1 chr17 19651572 - NF1 chr17 29585362 + Exonic hg19 THYM TCGA-ZB-A96L-01A 2 1 5'UTR-CDS Intra-chr p11.2 q11.2 Oncogene Tumor suppressor gene Seq+ 57350 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDH3A2-IFNK ALDH3A2 chr17 19575269 - IFNK chr9 27526005 + Exonic hg19 OV TCGA-13-1408-01A 5 4 CDS-3'UTR Inter-chr p11.2 p21.2 Seq+ 57351 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDH3A2-PITPNM2 ALDH3A2 chr17 19568360 - PITPNM2 chr12 123477216 - Exonic hg19 PRAD TCGA-G9-6494-01A 10 8 In-Frame Inter-chr p11.2 q24.31 Seq+ 57352 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDH3B2-ODZ4 ALDH3B2 chr11 67441908 - ODZ4 chr11 78433962 - Exonic hg19 BRCA TCGA-AC-A4ZE-01A 29 1 5'UTR-CDS Intra-chr q13.2 57353 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDH3B2-PLA2G16 ALDH3B2 chr11 67434377 - PLA2G16 chr11 63357840 - Exonic hg19 LUSC TCGA-92-7341-01A 6 2 Out-of-frame Intra-chr q13.2 q13.1 Tumor suppressor gene Seq+ 57354 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDH5A1-MAP3K5 ALDH5A1 chr6 24505213 - MAP3K5 chr6 136880014 - Exonic hg19 LUAD TCGA-69-7980-01A 6 5 In-Frame Intra-chr p22.3 q23.3 STE:STE11 Seq+ 57355 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDH7A1-PIP ALDH7A1 chr5 125911112 - PIP chr7 142832287 + Exonic hg19 OV TCGA-20-1682-01A 7 1 In-Frame Inter-chr q23.2 q34 Seq+ 57356 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDH9A1-MGST3 ALDH9A1 chr1 165648679 - MGST3 chr1 165619078 + Exonic hg19 SARC TCGA-X6-A8C2-01A 15 21 CDS-5'UTR Intra-chr q24.1 q24.1 57357 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDH9A1-NME7 ALDH9A1 chr1 165651344 - NME7 chr1 169206925 - Exonic hg19 LUAD TCGA-86-8673-01A 25 23 In-Frame Intra-chr q24.1 q24.2 Seq+ 57358 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDOA-ANKS1A ALDOA chr16 30081734 - ANKS1A chr6 34977682 + Exonic hg19 BLCA TCGA-FD-A3SM-01A 2 23 Out-of-frame Inter-chr p11.2 p21.31 57359 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDOA-ARFGEF2 ALDOA chr16 30081734 - ARFGEF2 chr20 47615777 + Exonic hg19 THCA TCGA-J8-A3O2-06A 2 7 Out-of-frame Inter-chr p11.2 q13.13 57360 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDOA-CCT5 ALDOA chr16 30081734 - CCT5 chr5 10250033 + Exonic hg19 UCS TCGA-N6-A4VD-01A 2 10 Out-of-frame Inter-chr p11.2 p15.2 57361 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDOA-DDX27 ALDOA chr16 30081734 - DDX27 chr20 47849303 + Exonic hg19 READ TCGA-AH-6549-01A 2 8 Out-of-frame Inter-chr p11.2 q13.13 57362 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDOA-DDX54 ALDOA chr16 30081734 - DDX54 chr12 113621607 - Exonic hg19 KIRP TCGA-EV-5902-01A 2 2 Out-of-frame Inter-chr p11.2 q24.13 57363 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDOA-FADS2 ALDOA chr16 30081734 - FADS2 chr11 61588853 + Exonic hg19 BRCA TCGA-AR-A1AS-01A 2 1 Out-of-frame Inter-chr p11.2 q12.2 57364 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDOA-INTS9 ALDOA chr16 30066648 - INTS9 chr8 28627543 - Exonic hg19 BLCA TCGA-FD-A62S-01A 3 1 5'UTR-CDS Inter-chr p11.2 p21.1 57365 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDOA-MPHOSPH8 ALDOA chr16 30081734 - MPHOSPH8 chr13 20233807 + Exonic hg19 BRCA TCGA-D8-A1X6-01A 2 4 Out-of-frame Inter-chr p11.2 q12.11 57366 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDOA-NDUFV1 ALDOA chr16 30081734 - NDUFV1 chr11 67375697 + Exonic hg19 BRCA TCGA-A2-A0CK-01A 2 24 Out-of-frame Inter-chr p11.2 q13.2 57367 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDOA-NDUFV1 ALDOA chr16 30081734 - NDUFV1 chr11 67375697 + Exonic hg19 PRAD TCGA-KK-A8I6-01A 2 7 Out-of-frame Inter-chr p11.2 q13.2 57368 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDOA-SCN2A ALDOA chr16 30081734 - SCN2A chr2 166150541 + Exonic hg19 LGG TCGA-CS-6669-01A 2 15 Out-of-frame Inter-chr p11.2 q24.3 57369 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDOA-SIAE ALDOA chr16 30081734 - SIAE chr11 124543777 - Exonic hg19 KIRP TCGA-A4-8515-01A 2 37 3'UTR-5'UTR Inter-chr p11.2 q24.2 57370 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDOA-SIAE ALDOA chr16 30081734 - SIAE chr11 124543777 - Exonic hg19 KIRP TCGA-P4-A5EB-01A 2 21 3'UTR-5'UTR Inter-chr p11.2 q24.2 57371 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDOA-SLC1A3 ALDOA chr16 30081734 - SLC1A3 chr5 36606541 + Exonic hg19 LGG TCGA-DU-5870-01A 2 1 Out-of-frame Inter-chr p11.2 p13.2 57372 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALDOC-KIF3A ALDOC chr17 26900133 - KIF3A chr5 132035266 - Exonic hg19 LGG TCGA-HT-8108-01A 2 3 3'UTR-CDS Inter-chr q11.2 q31.1 57373 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALG1-SEC14L5 ALG1 chr16 5125537 - SEC14L5 chr16 5064860 + Exonic hg19 LUSC TCGA-22-5483-01A 8 2 In-Frame Intra-chr p13.3 p13.3 Seq+ 57374 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALG10B-IGFBP6 ALG10B chr12 38712260 - IGFBP6 chr12 53495829 + Exonic hg19 HNSC TCGA-DQ-5624-01A 17 23 In-Frame Intra-chr q12 q13.13 Seq+ 57375 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALG12-CDT1 ALG12 chr22 50311911 - CDT1 chr16 88873459 + Exonic hg19 PRAD TCGA-2A-A8W3-01A 40 24 5'UTR-CDS Inter-chr q13.33 q24.3 Seq+ 57376 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALG12-FAM116B ALG12 chr22 50297827 - FAM116B chr22 50757432 - Exonic hg19 UCS TCGA-N5-A4RT-01A 6 1 Out-of-frame Intra-chr q13.33 57377 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALG12-IL17REL ALG12 chr22 50303542 - IL17REL chr22 50447093 - Exonic hg19 ESCA TCGA-LN-A4MQ-01A 2 3 CDS-5'UTR Intra-chr q13.33 q13.33 Seq+ 57378 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALG12-ZBED4 ALG12 chr22 50301369 - ZBED4 chr22 50276982 + Exonic hg19 LUSC TCGA-66-2754-01A 8 4 CDS-5'UTR Intra-chr q13.33 q13.33 Transcription factor 57379 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALG14-C1orf194 ALG14 chr1 95492685 - C1orf194 chr1 109649281 - Exonic hg19 BRCA TCGA-BH-A1FC-01A 4 5 Out-of-frame Intra-chr p21.3 p13.3 Seq+ 57380 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALG14-JAK1 ALG14 chr1 95492685 - JAK1 chr1 65313358 - Exonic hg19 BLCA TCGA-DK-AA6R-01A 13 3 In-Frame Intra-chr p21.3 p31.3 TK:JakA Oncogene Seq+ 57381 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALG14-NRD1 ALG14 chr1 95530422 - NRD1 chr1 52276076 - Exonic hg19 BRCA TCGA-BH-A0AU-01A 14 5 In-Frame Intra-chr p21.3 Seq+ 57382 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALG5-WBSCR17 ALG5 chr13 37559764 - WBSCR17 chr7 71175746 + Exonic hg19 BLCA TCGA-G2-A2EF-01A 50 19 In-Frame Inter-chr q13.3 q11.22 Seq+ 57383 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALG6-SLC22A15 ALG6 chr1 63836730 - SLC22A15 chr1 116569514 + Exonic hg19 SKCM TCGA-EB-A44R-06A 3 1 In-Frame Intra-chr p31.3 p13.1 57384 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALG8-FGF19 ALG8 chr11 77835067 - FGF19 chr11 69514344 - Exonic hg19 HNSC TCGA-CQ-6224-01A 7 3 Out-of-frame Intra-chr q14.1 q13.3 Seq+ 57385 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALG8-NARS2 ALG8 chr11 77815026 - NARS2 chr11 78204241 - Exonic hg19 BRCA TCGA-A2-A0T4-01A 86 48 In-Frame Intra-chr q14.1 q14.1 Seq+ 57386 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALG9-PDGFD ALG9 chr11 111706888 - PDGFD chr11 103818452 - Exonic hg19 MESO TCGA-UT-A88E-01B 44 38 In-Frame Intra-chr q23.1 q22.3 Seq+ 57387 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALK-GALNT14 ALK chr2 29519754 - GALNT14 chr2 31152353 - Exonic hg19 UCEC TCGA-A5-A2K2-01A 8 3 In-Frame Intra-chr p23.1 TK:ALK Oncogene p23.1 Seq+ 57388 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALK-SCEL ALK chr2 29754781 - SCEL chr13 78202082 + Exonic hg19 UCEC TCGA-EO-A3AS-01A 9 10 In-Frame Inter-chr p23.1 TK:ALK Oncogene q22.3 Seq+ 57389 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALK-STK39 ALK chr2 29940444 - STK39 chr2 169038600 - Exonic hg19 SKCM TCGA-Z2-AA3S-06A 3 2 In-Frame Intra-chr p23.1 TK:ALK Oncogene q24.3 Seq+ 57390 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALKBH3-ANO3 ALKBH3 chr11 43905567 - ANO3 chr11 26646009 + Exonic hg19 LUSC TCGA-60-2714-01A 2 2 Out-of-frame Intra-chr p11.2 p14.2 57391 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALKBH5-C17orf39 ALKBH5 chr17 18088327 - C17orf39 chr17 17962182 + Exonic hg19 CESC TCGA-HM-A6W2-01A 4 4 Out-of-frame Intra-chr p11.2 57392 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALKBH5-NUF2 ALKBH5 chr17 18088327 - NUF2 chr1 163306541 + Exonic hg19 SARC TCGA-WK-A8Y0-01A 19 8 Out-of-frame Inter-chr p11.2 q23.3 Seq+ 57393 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALKBH8-C11orf65 ALKBH8 chr11 107420479 - C11orf65 chr11 108179798 - Exonic hg19 PRAD TCGA-EJ-5518-01A 2 3 CDS-3'UTR Intra-chr q22.3 q22.3 57394 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALPK1-GALNTL6 ALPK1 chr4 113218625 - GALNTL6 chr4 173803941 + Exonic hg19 MESO TCGA-LK-A4NY-01A 3 3 5'UTR-CDS Intra-chr q25 q34.1 Seq+ 57395 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALPK1-NAA15 ALPK1 chr4 113362261 - NAA15 chr4 140291365 + Exonic hg19 SKCM TCGA-W3-A825-06A 3 4 In-Frame Intra-chr q25 q31.1 57396 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALPL-EIF4G3 ALPL chr1 21889777 - EIF4G3 chr1 21154191 - Exonic hg19 SARC TCGA-DX-AB2V-01A 2 1 Out-of-frame Intra-chr p36.12 Tumor suppressor gene p36.12 57397 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALPL-FILIP1L ALPL chr1 21836010 - FILIP1L chr3 99549449 - Exonic hg19 BRCA TCGA-AC-A6IW-01A 5 2 Out-of-frame Inter-chr p36.12 Tumor suppressor gene q12.1 Seq+ 57398 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALX4-LMX1A ALX4 chr11 44331147 - LMX1A chr1 165183050 - Exonic hg19 SARC TCGA-HB-A3YV-01A 5 4 In-Frame Inter-chr p11.2 Transcription factor q23.3 Transcription factor Seq+ 57399 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ALX4-STK33 ALX4 chr11 44289044 - STK33 chr11 8414257 - Exonic hg19 BRCA TCGA-B6-A0X7-01A 5 4 In-Frame Intra-chr p11.2 Transcription factor p15.4 CAMK:CAMK-Unique Seq+ 57400 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMACR-NDUFAF2 AMACR chr5 33998746 - NDUFAF2 chr5 60368952 + Exonic hg19 PRAD TCGA-EJ-8474-01A 17 114 In-Frame Intra-chr p13.2 q12.1 Seq+ 57401 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMBP-SEC63 AMBP chr9 116822407 - SEC63 chr6 108214782 - Exonic hg19 LIHC TCGA-DD-AADP-01A 2 4 Out-of-frame Inter-chr q32 q21 57402 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMBP-TYK2 AMBP chr9 116822407 - TYK2 chr19 10491352 - Exonic hg19 LIHC TCGA-DD-A115-01A 2 6 Out-of-frame Inter-chr q32 p13.2 TK:JakA 57403 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMBRA1-ARHGAP1 AMBRA1 chr11 46563495 - ARHGAP1 chr11 46717706 - Exonic hg19 LUAD TCGA-49-4488-01A 4 3 CDS-5'UTR Intra-chr p11.2 p11.2 Seq+ 57404 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMBRA1-ARHGAP1 AMBRA1 chr11 46615378 - ARHGAP1 chr11 46703732 - Exonic hg19 LUAD TCGA-62-A46R-01A 11 8 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 57405 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMBRA1-CAT AMBRA1 chr11 46615378 - CAT chr11 34470739 + Exonic hg19 STAD TCGA-R5-A7ZE-01B 3 17 5'UTR-CDS Intra-chr p11.2 p13 Tumor suppressor gene Seq+ 57406 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMBRA1-CCDC61 AMBRA1 chr11 46615378 - CCDC61 chr19 46506266 + Exonic hg19 LGG TCGA-DH-5142-01A 16 11 5'UTR-CDS Inter-chr p11.2 q13.32 Seq+ 57407 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMBRA1-CKAP5 AMBRA1 chr11 46615378 - CKAP5 chr11 46806223 - Exonic hg19 BLCA TCGA-E7-A5KE-01A 7 8 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 57408 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMBRA1-HARBI1 AMBRA1 chr11 46615378 - HARBI1 chr11 46625459 - Exonic hg19 OV TCGA-13-0919-01A 3 30 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 57409 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMBRA1-HARBI1 AMBRA1 chr11 46563495 - HARBI1 chr11 46625459 - Exonic hg19 UCEC TCGA-5B-A90C-01A 19 8 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 57410 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMBRA1-HARBI1 AMBRA1 chr11 46615378 - HARBI1 chr11 46625459 - Exonic hg19 BRCA TCGA-A8-A09D-01A 8 2 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 57411 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMBRA1-HARBI1 AMBRA1 chr11 46615378 - HARBI1 chr11 46637931 - Exonic hg19 SKCM TCGA-D3-A3MO-06A 14 12 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 57412 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMBRA1-HARBI1 AMBRA1 chr11 46615378 - HARBI1 chr11 46625459 - Exonic hg19 ACC TCGA-OR-A5L6-01A 6 3 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 57413 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMBRA1-HARBI1 AMBRA1 chr11 46615378 - HARBI1 chr11 46625459 - Exonic hg19 SARC TCGA-QQ-A8VF-01A 3 1 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 57414 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMBRA1-HARBI1 AMBRA1 chr11 46615378 - HARBI1 chr11 46637931 - Exonic hg19 TGCT TCGA-XE-AAOD-01A 3 3 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 57415 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMBRA1-LRP4 AMBRA1 chr11 46615378 - LRP4 chr11 46924480 - Exonic hg19 SKCM TCGA-FS-A1ZQ-06A 4 5 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 57416 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMBRA1-LRP4 AMBRA1 chr11 46515158 - LRP4 chr11 46898188 - Exonic hg19 ACC TCGA-OR-A5KY-01A 16 2 In-Frame Intra-chr p11.2 p11.2 Seq+ 57417 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMBRA1-TRPC6 AMBRA1 chr11 46615378 - TRPC6 chr11 101375529 - Exonic hg19 PRAD TCGA-EJ-8470-01A 14 7 5'UTR-CDS Intra-chr p11.2 q22.1 Seq+ 57418 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMD1-FIG4 AMD1 chr6 111196418 - FIG4 chr6 110146291 + Exonic hg19 UCS TCGA-NA-A5I1-01A 195 16 In-Frame Intra-chr q21 q21 Seq+ 57419 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMDHD1-ACSS3 AMDHD1 chr12 96346601 - ACSS3 chr12 81568567 + Exonic hg19 SARC TCGA-DX-A1L3-01A 6 1 Out-of-frame Intra-chr q23.1 q21.31 Seq+ 57420 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMFR-ITGAM AMFR chr16 56419831 - ITGAM chr16 31332562 + Exonic hg19 BRCA TCGA-D8-A27W-01A 91 100 5'UTR-CDS Intra-chr q13 p11.2 Seq+ 57421 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMFR-PLLP AMFR chr16 56435645 - PLLP chr16 57295982 - Exonic hg19 SARC TCGA-HS-A5N7-01A 6 2 5'UTR-CDS Intra-chr q13 q13 57422 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMMECR1-PLA2G12B AMMECR1 chrX 109507717 - PLA2G12B chr10 74702498 - Exonic hg19 LUAD TCGA-MN-A4N5-01A 4 1 Out-of-frame Inter-chr q23 q22.1 Seq+ 57423 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMMECR1L-SAP130 AMMECR1L chr2 128641777 - SAP130 chr2 128712918 - Exonic hg19 BRCA TCGA-BH-A0B9-01A 57 109 5'UTR-CDS Intra-chr q14.3 q14.3 Seq+ 57424 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMMECR1L-TNFRSF10C AMMECR1L chr2 128641777 - TNFRSF10C chr8 22969233 + Exonic hg19 PRAD TCGA-EJ-5524-01A 13 8 5'UTR-CDS Inter-chr q14.3 p21.3 Seq+ 57425 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMN1-FAR2 AMN1 chr12 31841941 - FAR2 chr12 29460591 + Exonic hg19 LUAD TCGA-80-5611-01A 5 1 Out-of-frame Intra-chr p11.21 p11.22 57426 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMOTL1-CCDC88B AMOTL1 chr11 94587247 - CCDC88B chr11 64118948 + Exonic hg19 LGG TCGA-FG-5963-01A 12 7 In-Frame Intra-chr q21 q13.1 Seq+ 57427 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMOTL1-CCDC88B AMOTL1 chr11 94587247 - CCDC88B chr11 64118948 + Exonic hg19 LGG TCGA-FG-5963-02A 25 8 In-Frame Intra-chr q21 q13.1 Seq+ 57428 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMOTL1-KIAA1731 AMOTL1 chr11 94462221 - KIAA1731 chr11 93454478 + Exonic hg19 HNSC TCGA-QK-A8Z9-01B 23 7 5'UTR-CDS Intra-chr q21 Seq+ 57429 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMOTL1-PIWIL4 AMOTL1 chr11 94501726 - PIWIL4 chr11 94340605 + Exonic hg19 SARC TCGA-KD-A5QS-01A 3 3 Out-of-frame Intra-chr q21 q21 Seq+ 57430 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMOTL1-SLCO2B1 AMOTL1 chr11 94528326 - SLCO2B1 chr11 74873700 + Exonic hg19 BLCA TCGA-BT-A0S7-01A 6 2 In-Frame Intra-chr q21 q13.4 Seq+ 57431 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMPD2-ALB AMPD2 chr1 110171428 - ALB chr4 74270018 + Exonic hg19 LIHC TCGA-DD-AAE2-01A 3 1 Out-of-frame Inter-chr p13.3 q13.3 57432 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMPD3-ANKH AMPD3 chr11 10523137 - ANKH chr5 14711419 - Exonic hg19 PCPG TCGA-WB-A81H-01A 28 20 In-Frame Inter-chr p15.4 p15.2 Seq+ 57433 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AMZ2-KDM1B AMZ2 chr17 66247319 - KDM1B chr6 18205768 + Exonic hg19 UCEC TCGA-PG-A914-01A 6 18 Out-of-frame Inter-chr q24.2 p22.3 Seq+ 57434 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANAPC16-MICU1 ANAPC16 chr10 73975896 - MICU1 chr10 74237014 - Exonic hg19 BRCA TCGA-A8-A06Q-01A 234 155 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 57435 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANAPC2-EYS ANAPC2 chr9 140081933 - EYS chr6 65767620 - Exonic hg19 BLCA TCGA-GV-A40G-01A 2 1 Out-of-frame Inter-chr q34.3 q12 57436 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANAPC5-ADAM15 ANAPC5 chr12 121783642 - ADAM15 chr1 155034721 + Exonic hg19 SKCM TCGA-QB-AA9O-06A 187 161 In-Frame Inter-chr q24.31 q21.3 Seq+ 57437 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANAPC5-KDM2B ANAPC5 chr12 121773336 - KDM2B chr12 121868272 - Exonic hg19 STAD TCGA-BR-8373-01A 13 24 Out-of-frame Intra-chr q24.31 q24.31 Transcription factor Seq+ 57438 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANAPC5-KDM2B ANAPC5 chr12 121764899 - KDM2B chr12 121958903 - Exonic hg19 BRCA TCGA-E2-A1LL-01A 3 3 Out-of-frame Intra-chr q24.31 q24.31 Transcription factor Seq+ 57439 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANAPC7-CORO1C ANAPC7 chr12 110841332 - CORO1C chr12 109095099 - Exonic hg19 LGG TCGA-P5-A736-01A 4 3 CDS-5'UTR Intra-chr q24.11 q24.11 57440 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANAPC7-PAH ANAPC7 chr12 110841332 - PAH chr12 103271328 - Exonic hg19 PRAD TCGA-XQ-A8TA-01A 4 3 Out-of-frame Intra-chr q24.11 q23.2 Seq+ 57441 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANGPT1-TNFRSF11B ANGPT1 chr8 108509490 - TNFRSF11B chr8 119945539 - Exonic hg19 SARC TCGA-DX-AB2E-01A 88 45 In-Frame Intra-chr q23.1 q24.12 Seq+ 57442 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANGPTL4-CLCN3 ANGPTL4 chr19 8439257 - CLCN3 chr4 170623929 + Exonic hg19 LUAD TCGA-80-5608-01A 2 2 Out-of-frame Inter-chr p13.2 Tumor suppressor gene q33 57443 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANK1-ADAM7 ANK1 chr8 41591489 - ADAM7 chr8 24384268 + Exonic hg19 BRCA TCGA-E2-A1IH-01A 19 20 CDS-3'UTR Intra-chr p11.21 p21.2 Seq+ 57444 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANK1-FUT10 ANK1 chr8 41553881 - FUT10 chr8 33247316 - Exonic hg19 OV TCGA-24-1604-01A 9 1 Out-of-frame Intra-chr p11.21 p12 Seq+ 57445 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANK2-ALPK1 ANK2 chr4 113825670 - ALPK1 chr4 113359640 + Exonic hg19 LUAD TCGA-50-6592-01A 3 2 Out-of-frame Intra-chr q25 q25 Seq+ 57446 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANK2-ALPK1 ANK2 chr4 113825670 - ALPK1 chr4 113350305 + Exonic hg19 LGG TCGA-HT-8104-01A 6 14 In-Frame Intra-chr q25 q25 Seq+ 57447 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANK2-ARHGAP10 ANK2 chr4 113970968 - ARHGAP10 chr4 148944414 + Exonic hg19 GBM TCGA-27-1830-01A 4 7 In-Frame Intra-chr q25 q31.23 Seq+ 57448 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANK2-ARHGAP31 ANK2 chr4 114304891 - ARHGAP31 chr3 119013220 + Exonic hg19 LGG TCGA-DB-A75P-01A 2 1 3'UTR-5'UTR Inter-chr q25 q13.32 57449 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANK3-ACTA2 ANK3 chr10 62374944 - ACTA2 chr10 90697999 - Exonic hg19 COAD TCGA-D5-6536-01A 14 9 Out-of-frame Intra-chr q21.2 q23.31 Seq+ 57450 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANK3-ATAD1 ANK3 chr10 62374944 - ATAD1 chr10 89574369 - Exonic hg19 BRCA TCGA-E9-A1N6-01A 2 7 CDS-5'UTR Intra-chr q21.2 Seq+ 57451 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANK3-CDK1 ANK3 chr10 61894029 - CDK1 chr10 62539899 + Exonic hg19 BRCA TCGA-A2-A0CL-01A 11 11 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 57452 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANK3-CHN2 ANK3 chr10 62021617 - CHN2 chr7 29433295 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 22 18 In-Frame Inter-chr q21.2 p14.3 Seq+ 57453 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANK3-IFIT5 ANK3 chr10 62493021 - IFIT5 chr10 91176962 + Exonic hg19 BRCA TCGA-AR-A0TT-01A 2 1 Out-of-frame Intra-chr q21.2 q23.31 57454 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANK3-MCU ANK3 chr10 62374944 - MCU chr10 74594117 + Exonic hg19 UCS TCGA-NF-A5CP-01A 5 2 In-Frame Intra-chr q21.2 q22.1 Seq+ 57455 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANK3-RHOBTB1 ANK3 chr10 62493021 - RHOBTB1 chr10 62671310 - Exonic hg19 BRCA TCGA-A7-A26G-01A 3 2 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 57456 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANK3-SP2 ANK3 chr10 62374944 - SP2 chr17 45992678 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 6 1 Out-of-frame Inter-chr q21.2 q21.32 Transcription factor Seq+ 57457 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANK3-TMPRSS15 ANK3 chr10 61894029 - TMPRSS15 chr21 19687573 - Exonic hg19 BRCA TCGA-AO-A12D-01A 2 1 Out-of-frame Inter-chr q21.2 q21.1 Seq+ 57458 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANK3-USP9Y ANK3 chr10 61815416 - USP9Y chrY 14968265 + Exonic hg19 PRAD TCGA-KK-A8IH-01A 3 4 Out-of-frame Inter-chr q21.2 q11.221 Seq+ 57459 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANK3-WDFY4 ANK3 chr10 61905726 - WDFY4 chr10 49917761 + Exonic hg19 BRCA TCGA-E2-A10C-01A 3 6 CDS-5'UTR Intra-chr q21.2 q11.23 Seq+ 57460 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKDD1A-PLEKHO2 ANKDD1A chr15 65234762 - PLEKHO2 chr15 65152093 + Exonic hg19 GBM TCGA-06-0152-02A 5 5 In-Frame Intra-chr q22.31 q22.31 Seq+ 57461 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKFY1-CCDC88C ANKFY1 chr17 4145551 - CCDC88C chr14 91757428 - Exonic hg19 ESCA TCGA-L5-A4OS-01A 2 12 In-Frame Inter-chr p13.2 q32.12 Seq+ 57462 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKH-ANO6 ANKH chr5 14741936 - ANO6 chr12 45664245 + Exonic hg19 SKCM TCGA-GN-A26D-06A 11 4 Out-of-frame Inter-chr p15.2 q12 Seq+ 57463 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKH-DNAH5 ANKH chr5 14871461 - DNAH5 chr5 13736041 - Exonic hg19 SARC TCGA-DX-A1L0-01A 11 19 Out-of-frame Intra-chr p15.2 p15.2 Seq+ 57464 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKH-MXD3 ANKH chr5 14741936 - MXD3 chr5 176737541 - Exonic hg19 LUAD TCGA-05-4426-01A 10 8 Out-of-frame Intra-chr p15.2 q35.3 Transcription factor Seq+ 57465 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKH-R3HDM1 ANKH chr5 14871461 - R3HDM1 chr2 136360070 + Exonic hg19 SARC TCGA-FX-A2QS-01A 2 1 CDS-5'UTR Inter-chr p15.2 q21.3 57466 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKH-STEAP3 ANKH chr5 14871461 - STEAP3 chr2 120003065 + Exonic hg19 SARC TCGA-DX-A1KZ-01A 29 23 Out-of-frame Inter-chr p15.2 q14.2 Seq+ 57467 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKHD1-C5orf32 ANKHD1 chr5 139866645 - C5orf32 chr5 139622890 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 97 30 Out-of-frame Intra-chr q31.3 57468 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKHD1-C5orf32 ANKHD1 chr5 139866645 - C5orf32 chr5 139574031 + Exonic hg19 BRCA TCGA-BH-A0H9-01A 28 20 Out-of-frame Intra-chr q31.3 57469 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKHD1-PAIP2 ANKHD1 chr5 139865317 - PAIP2 chr5 138704422 + Exonic hg19 STAD TCGA-BR-4357-01A 12 7 In-Frame Intra-chr q31.3 q31.2 Tumor suppressor gene 57470 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKHD1-TIAM2 ANKHD1 chr5 139828890 - TIAM2 chr6 155565145 + Exonic hg19 BRCA TCGA-A2-A0CK-01A 8 3 In-Frame Inter-chr q31.3 q25.2 Seq+ 57471 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKHD1-EIF4EBP3-C5orf32 ANKHD1-EIF4EBP3 chr5 139903825 - C5orf32 chr5 139622890 + Exonic hg19 UCS TCGA-NA-A4R0-01A 34 11 Out-of-frame Intra-chr q31.3 57472 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKHD1-EIF4EBP3-GTF2I ANKHD1-EIF4EBP3 chr5 139929154 - GTF2I chr7 74072011 + Exonic hg19 KIRC TCGA-A3-3317-01A 2 3 Out-of-frame Inter-chr q31.3 q11.23 57473 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKIB1-CDK14 ANKIB1 chr7 91875833 - CDK14 chr7 90836480 + Exonic hg19 PRAD TCGA-YL-A9WY-01A 14 6 5'UTR-3'UTR Intra-chr q21.2 q21.13 Seq+ 57474 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKIB1-CYP3A4 ANKIB1 chr7 92021606 - CYP3A4 chr7 99359890 - Exonic hg19 PAAD TCGA-IB-AAUS-01A 7 2 In-Frame Intra-chr q21.2 q22.1 Seq+ 57475 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKIB1-LMTK2 ANKIB1 chr7 91981956 - LMTK2 chr7 97814363 + Exonic hg19 LUSC TCGA-56-8083-01A 14 11 In-Frame Intra-chr q21.2 q21.3 Seq+ 57476 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKIB1-PEX1 ANKIB1 chr7 91948826 - PEX1 chr7 92138725 - Exonic hg19 STAD TCGA-CG-4438-01A 18 28 In-Frame Intra-chr q21.2 q21.2 Seq+ 57477 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKIB1-TNFRSF17 ANKIB1 chr7 91875833 - TNFRSF17 chr16 12060052 + Exonic hg19 STAD TCGA-RD-A8MW-01A 4 14 5'UTR-CDS Inter-chr q21.2 p13.13 Seq+ 57478 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKLE2-MGAT1 ANKLE2 chr12 133324418 - MGAT1 chr5 180220097 - Exonic hg19 SARC TCGA-3B-A9HS-01A 66 38 CDS-5'UTR Inter-chr q24.33 q35.3 Seq+ 57479 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKLE2-NCOR2 ANKLE2 chr12 133327229 - NCOR2 chr12 124812179 - Exonic hg19 LGG TCGA-DU-8167-01A 7 11 In-Frame Intra-chr q24.33 q24.31 Seq+ 57480 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKLE2-NHP2L1 ANKLE2 chr12 133324418 - NHP2L1 chr22 42076368 - Exonic hg19 BRCA TCGA-BH-A0B7-01A 58 35 In-Frame Inter-chr q24.33 Seq+ 57481 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKMY1-GPR35 ANKMY1 chr2 241492331 - GPR35 chr2 241569366 + Exonic hg19 PAAD TCGA-2J-AABR-01A 4 2 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 57482 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKMY2-C21orf37 ANKMY2 chr7 16664608 - C21orf37 chr21 18821183 + Exonic hg19 SARC TCGA-QC-AA9N-01A 5 1 CDS-5'UTR Inter-chr p21.1 57483 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD10-MYO16 ANKRD10 chr13 111545375 - MYO16 chr13 109772718 + Exonic hg19 LUAD TCGA-86-7955-01A 5 7 Out-of-frame Intra-chr q34 Seq+ 57484 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD11-AC009113.1 ANKRD11 chr16 89556653 - AC009113.1 chr16 89287405 + Exonic hg19 STAD TCGA-VQ-A94O-01A 2 4 Out-of-frame Intra-chr q24.3 q24.3 57485 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD11-BRMS1 ANKRD11 chr16 89484692 - BRMS1 chr11 66109712 - Exonic hg19 SKCM TCGA-FR-A3YO-06A 150 89 5'UTR-5'UTR Inter-chr q24.3 q13.2 Tumor suppressor gene Seq+ 57486 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD11-C16orf7 ANKRD11 chr16 89556653 - C16orf7 chr16 89776314 - Exonic hg19 STAD TCGA-BR-4357-01A 47 38 5'UTR-CDS Intra-chr q24.3 57487 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD11-CDH15 ANKRD11 chr16 89484692 - CDH15 chr16 89253837 + Exonic hg19 PRAD TCGA-M7-A725-01A 2 3 5'UTR-CDS Intra-chr q24.3 q24.3 57488 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD11-CHMP1A ANKRD11 chr16 89484692 - CHMP1A chr16 89720331 - Exonic hg19 UCEC TCGA-BK-A139-01A 8 17 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 57489 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD11-CHMP1A ANKRD11 chr16 89484692 - CHMP1A chr16 89720331 - Exonic hg19 UCEC TCGA-BK-A139-02A 35 15 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 57490 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD11-CNOT1 ANKRD11 chr16 89484692 - CNOT1 chr16 58633415 - Exonic hg19 COAD TCGA-A6-6650-01B 2 1 5'UTR-5'UTR Intra-chr q24.3 q21 57491 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD11-CPNE7 ANKRD11 chr16 89556653 - CPNE7 chr16 89657415 + Exonic hg19 SKCM TCGA-FS-A1ZK-06A 5 6 5'UTR-CDS Intra-chr q24.3 q24.3 Tumor suppressor gene Seq+ 57492 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD11-DPEP1 ANKRD11 chr16 89556653 - DPEP1 chr16 89696713 + Exonic hg19 THCA TCGA-ET-A2N3-01B 2 2 5'UTR-5'UTR Intra-chr q24.3 q24.3 Seq+ 57493 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD11-ERGIC2 ANKRD11 chr16 89556653 - ERGIC2 chr12 29524603 - Exonic hg19 STAD TCGA-CD-8524-01A 27 81 5'UTR-5'UTR Inter-chr q24.3 p11.22 Seq+ 57494 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD11-FANCA ANKRD11 chr16 89484692 - FANCA chr16 89818630 - Exonic hg19 LUAD TCGA-97-8176-01A 3 1 5'UTR-CDS Intra-chr q24.3 q24.3 Oncogene Seq+ 57495 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD11-FANCA ANKRD11 chr16 89556653 - FANCA chr16 89849510 - Exonic hg19 STAD TCGA-BR-8485-01A 2 2 5'UTR-CDS Intra-chr q24.3 q24.3 Oncogene Seq+ 57496 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD11-FANCA ANKRD11 chr16 89484692 - FANCA chr16 89838222 - Exonic hg19 STAD TCGA-BR-A4QI-01A 5 72 5'UTR-CDS Intra-chr q24.3 q24.3 Oncogene Seq+ 57497 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD11-FANCA ANKRD11 chr16 89556653 - FANCA chr16 89818630 - Exonic hg19 ESCA TCGA-L5-A8NI-01A 6 74 5'UTR-CDS Intra-chr q24.3 q24.3 Oncogene Seq+ 57498 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD11-KLHL32 ANKRD11 chr16 89556653 - KLHL32 chr6 97489368 + Exonic hg19 OV TCGA-24-1558-01A 18 10 5'UTR-CDS Inter-chr q24.3 q16.1 Seq+ 57499 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD11-LINGO1 ANKRD11 chr16 89484692 - LINGO1 chr15 77908242 - Exonic hg19 BRCA TCGA-GM-A3XL-01A 22 14 5'UTR-CDS Inter-chr q24.3 q24.3 Seq+ 57500 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD11-NAALADL2 ANKRD11 chr16 89357033 - NAALADL2 chr3 174951721 + Exonic hg19 SARC TCGA-IW-A3M5-01A 3 1 Out-of-frame Inter-chr q24.3 q26.31 57501 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD11-SPIRE2 ANKRD11 chr16 89484692 - SPIRE2 chr16 89911730 + Exonic hg19 UCEC TCGA-B5-A5OD-01A 9 12 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 57502 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD11-STARD10 ANKRD11 chr16 89484692 - STARD10 chr11 72492339 - Exonic hg19 BLCA TCGA-XF-A9SY-01A 2 1 5'UTR-5'UTR Inter-chr q24.3 q13.4 57503 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD11-TGIF1 ANKRD11 chr16 89556653 - TGIF1 chr18 3456352 + Exonic hg19 LUAD TCGA-44-7667-01A 4 10 5'UTR-5'UTR Inter-chr q24.3 p11.31 Transcription factor Seq+ 57504 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD12-C10orf11 ANKRD12 chr18 9136963 - C10orf11 chr10 77818424 + Exonic hg19 BRCA TCGA-C8-A8HP-01A 39 28 5'UTR-CDS Inter-chr p11.22 Seq+ 57505 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD12-DLGAP1 ANKRD12 chr18 9195696 - DLGAP1 chr18 4005201 - Exonic hg19 STAD TCGA-FP-8209-01A 2 5 CDS-5'UTR Intra-chr p11.22 p11.31 Seq+ 57506 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD12-EPB41L3 ANKRD12 chr18 9182517 - EPB41L3 chr18 5489160 - Exonic hg19 LUSC TCGA-77-7141-01A 6 3 Out-of-frame Intra-chr p11.22 p11.31 Tumor suppressor gene Seq+ 57507 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD12-MTHFD2L ANKRD12 chr18 9221997 - MTHFD2L chr4 75091019 + Exonic hg19 BRCA TCGA-A2-A4S3-01A 32 12 In-Frame Inter-chr p11.22 q13.3 Seq+ 57508 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD12-PTPRM ANKRD12 chr18 9136963 - PTPRM chr18 8394474 + Exonic hg19 LUAD TCGA-05-4395-01A 20 6 5'UTR-CDS Intra-chr p11.22 p11.23 Seq+ 57509 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD13C-FZR1 ANKRD13C chr1 70790536 - FZR1 chr19 3522954 + Exonic hg19 PRAD TCGA-YL-A8SK-01B 2 1 CDS-5'UTR Inter-chr p31.1 p13.3 Oncogene Tumor suppressor gene Seq+ 57510 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD13C-HHLA3 ANKRD13C chr1 70801741 - HHLA3 chr1 70832127 + Exonic hg19 LUAD TCGA-86-8075-01A 6 3 In-Frame Intra-chr p31.1 p31.1 Seq+ 57511 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD13C-OR5V1 ANKRD13C chr1 70766447 - OR5V1 chr6 29324054 - Exonic hg19 OV TCGA-25-1315-01A 2 1 CDS-5'UTR Inter-chr p31.1 Seq+ 57512 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD13C-PTGER3 ANKRD13C chr1 70766447 - PTGER3 chr1 71440071 - Exonic hg19 SARC TCGA-MB-A5Y8-01A 6 3 In-Frame Intra-chr p31.1 p31.1 57513 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD17-RPRD1B ANKRD17 chr4 73979509 - RPRD1B chr20 36694483 + Exonic hg19 BRCA TCGA-C8-A1HN-01A 22 14 Out-of-frame Inter-chr q13.3 q11.23 Seq+ 57514 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD17-SQRDL ANKRD17 chr4 74123993 - SQRDL chr15 45951105 + Exonic hg19 LUAD TCGA-78-7539-01A 4 5 CDS-5'UTR Inter-chr q13.3 Seq+ 57515 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD17-WDFY3 ANKRD17 chr4 73962834 - WDFY3 chr4 85630500 - Exonic hg19 BRCA TCGA-C8-A26Y-01A 8 9 In-Frame Intra-chr q13.3 q21.23 Seq+ 57516 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD18A-ZNF521 ANKRD18A chr9 38572003 - ZNF521 chr18 22672045 - Exonic hg19 SARC TCGA-DX-AB2T-01A 3 1 3'UTR-CDS Inter-chr p13.1 q11.2 Oncogene Transcription factor 57517 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD18B-SNX30 ANKRD18B chr9 33550577 - SNX30 chr9 115598494 + Exonic hg19 LUAD TCGA-50-5946-01A 3 2 In-Frame Intra-chr p13.3 q32 Seq+ 57518 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD18B-SNX30 ANKRD18B chr9 33550577 - SNX30 chr9 115598494 + Exonic hg19 LUAD TCGA-50-5946-02A 7 4 In-Frame Intra-chr p13.3 q32 Seq+ 57519 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD22-LRRTM3 ANKRD22 chr10 90611344 - LRRTM3 chr10 68857345 + Exonic hg19 PRAD TCGA-XQ-A8TB-01A 17 12 In-Frame Intra-chr q23.31 q21.3 Seq+ 57520 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD26-MCM10 ANKRD26 chr10 27389014 - MCM10 chr10 13251091 + Exonic hg19 BLCA TCGA-XF-A8HD-01A 19 9 In-Frame Intra-chr p12.1 p13 Seq+ 57521 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD27-DPY19L3 ANKRD27 chr19 33165977 - DPY19L3 chr19 32944051 + Exonic hg19 LUSC TCGA-NK-A5D1-01A 2 2 5'UTR-CDS Intra-chr q13.11 q13.11 Seq+ 57522 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD27-PEPD ANKRD27 chr19 33118989 - PEPD chr19 33902655 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 6 8 Out-of-frame Intra-chr q13.11 q13.11 Seq+ 57523 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD27-RNF38 ANKRD27 chr19 33140588 - RNF38 chr9 36376124 - Exonic hg19 SKCM TCGA-FW-A3I3-06A 5 7 In-Frame Inter-chr q13.11 p13.2 Seq+ 57524 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD27-SLC7A9 ANKRD27 chr19 33135231 - SLC7A9 chr19 33321590 - Exonic hg19 UCEC TCGA-BG-A3PP-01A 26 6 Out-of-frame Intra-chr q13.11 q13.11 Seq+ 57525 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD27-TDRD12 ANKRD27 chr19 33106564 - TDRD12 chr19 33222631 + Exonic hg19 CESC TCGA-DG-A2KM-01A 22 14 In-Frame Intra-chr q13.11 q13.11 Seq+ 57526 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD27-ZFP14 ANKRD27 chr19 33134029 - ZFP14 chr19 36832492 - Exonic hg19 LUSC TCGA-66-2742-01A 12 7 Out-of-frame Intra-chr q13.11 q13.12 Transcription factor Seq+ 57527 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD27-ZNF536 ANKRD27 chr19 33098541 - ZNF536 chr19 31025754 + Exonic hg19 LUSC TCGA-37-A5EN-01A 8 2 Out-of-frame Intra-chr q13.11 q12 Transcription factor Seq+ 57528 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD28-GRM7 ANKRD28 chr3 15900884 - GRM7 chr3 7782044 + Exonic hg19 BLCA TCGA-FD-A6TG-01A 11 16 Out-of-frame Intra-chr p25.1 p26.1 Seq+ 57529 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD28-RFTN1 ANKRD28 chr3 15719716 - RFTN1 chr3 16535384 - Exonic hg19 LUSC TCGA-18-3414-01A 2 1 CDS-5'UTR Intra-chr p25.1 p24.3 57530 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD28-TM9SF4 ANKRD28 chr3 15836730 - TM9SF4 chr20 30720816 + Exonic hg19 SKCM TCGA-FS-A1ZF-06A 24 14 In-Frame Inter-chr p25.1 q11.21 Seq+ 57531 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD33B-ANKH ANKRD33B chr5 10564945 - ANKH chr5 14769300 - Exonic hg19 SARC TCGA-DX-A1KZ-01A 9 6 In-Frame Intra-chr p15.2 p15.2 Seq+ 57532 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD33B-NIPBL ANKRD33B chr5 10564945 - NIPBL chr5 37058993 + Exonic hg19 KIRP TCGA-B9-A5W9-01A 83 65 In-Frame Intra-chr p15.2 p13.2 Seq+ 57533 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD36-UGGT1 ANKRD36 chr2 97812253 - UGGT1 chr2 128880760 + Exonic hg19 SARC TCGA-DX-A6YV-01A 2 4 In-Frame Intra-chr q11.2 q14.3 57534 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD37-MTERFD2 ANKRD37 chr4 186321395 - MTERFD2 chr2 242036128 - Exonic hg19 PRAD TCGA-G9-6499-01A 2 2 Out-of-frame Inter-chr q35.1 57535 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD39-FAM178B ANKRD39 chr2 97523625 - FAM178B chr2 97568444 - Exonic hg19 HNSC TCGA-CR-6478-01A 63 74 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 57536 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD39-FAM178B ANKRD39 chr2 97519138 - FAM178B chr2 97613639 - Exonic hg19 BLCA TCGA-XF-A9ST-01A 4 3 In-Frame Intra-chr q11.2 q11.2 Seq+ 57537 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD40-LRRC6 ANKRD40 chr17 48774301 - LRRC6 chr8 133622507 - Exonic hg19 LUAD TCGA-L9-A443-01A 24 40 In-Frame Inter-chr q21.33 q24.22 Seq+ 57538 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD40-NFIX ANKRD40 chr17 48784882 - NFIX chr19 13135835 + Exonic hg19 CESC TCGA-C5-A7CM-01A 2 5 Out-of-frame Inter-chr q21.33 p13.13 Transcription factor Seq+ 57539 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD42-RHOD ANKRD42 chr11 82959129 - RHOD chr11 66837896 + Exonic hg19 BRCA TCGA-AN-A0FZ-01A 9 6 3'UTR-CDS Intra-chr q14.1 q13.2 Seq+ 57540 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD44-ANKAR ANKRD44 chr2 198175302 - ANKAR chr2 190571664 + Exonic hg19 MESO TCGA-TS-A7P8-01A 2 1 Out-of-frame Intra-chr q33.1 q32.2 Seq+ 57541 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD44-FASTKD1 ANKRD44 chr2 198175302 - FASTKD1 chr2 170413807 - Exonic hg19 KIRP TCGA-A4-A5Y0-01A 2 1 Out-of-frame Intra-chr q33.1 q31.1 Seq+ 57542 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD46-NCALD ANKRD46 chr8 101571939 - NCALD chr8 102705124 - Exonic hg19 BLCA TCGA-XF-A8HH-01A 6 19 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 57543 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD46-ODF1 ANKRD46 chr8 101534834 - ODF1 chr8 103572680 + Exonic hg19 BLCA TCGA-BT-A20W-01A 6 5 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 57544 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD46-TMEM222 ANKRD46 chr8 101571939 - TMEM222 chr1 27657211 + Exonic hg19 BRCA TCGA-AN-A04D-01A 8 42 5'UTR-5'UTR Inter-chr q22.3 p36.11 Seq+ 57545 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD52-ASPHD1 ANKRD52 chr12 56649568 - ASPHD1 chr16 29917109 + Exonic hg19 STAD TCGA-MX-A666-01A 6 34 Out-of-frame Inter-chr q13.3 p11.2 Seq+ 57546 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD52-DYRK2 ANKRD52 chr12 56641277 - DYRK2 chr12 68050886 + Exonic hg19 ACC TCGA-OR-A5K9-01A 2 1 In-Frame Intra-chr q13.3 q15 CMGC:DYRK Seq+ 57547 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD52-RP11-362K2.2 ANKRD52 chr12 56638137 - RP11-362K2.2 chr12 59206196 + Exonic hg19 SARC TCGA-DX-A3LY-01B 8 28 Out-of-frame Intra-chr q13.3 57548 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKRD6-ZDHHC14 ANKRD6 chr6 90276815 - ZDHHC14 chr6 158049381 + Exonic hg19 LGG TCGA-E1-5304-01A 67 33 Out-of-frame Intra-chr q15 q25.3 Seq+ 57549 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKS1A-MYO1F ANKS1A chr6 34857376 - MYO1F chr19 8609348 - Exonic hg19 SKCM TCGA-EB-A5SH-06A 2 1 Out-of-frame Inter-chr p21.31 p13.2 57550 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKS1A-PIGN ANKS1A chr6 34857376 - PIGN chr18 59713212 - Exonic hg19 UCEC TCGA-EY-A2OQ-01A 2 7 In-Frame Inter-chr p21.31 q21.33 Seq+ 57551 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKS1B-NDUFA12 ANKS1B chr12 100048845 - NDUFA12 chr12 95365396 - Exonic hg19 BRCA TCGA-BH-A0B6-01A 8 8 Out-of-frame Intra-chr q23.1 q22 Seq+ 57552 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKS1B-PTPRQ ANKS1B chr12 100377882 - PTPRQ chr12 80981908 + Exonic hg19 MESO TCGA-UD-AAC4-01A 2 2 Out-of-frame Intra-chr q23.1 q21.31 57553 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKS1B-UHRF1BP1L ANKS1B chr12 100377882 - UHRF1BP1L chr12 100444096 - Exonic hg19 ESCA TCGA-2H-A9GQ-01A 3 7 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 57554 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKS3-C16orf71 ANKS3 chr16 4764052 - C16orf71 chr16 4796376 + Exonic hg19 BRCA TCGA-S3-AA0Z-01A 57 15 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 57555 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKS3-GLYR1 ANKS3 chr16 4774751 - GLYR1 chr16 4882913 - Exonic hg19 STAD TCGA-BR-8286-01A 2 8 Out-of-frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 57556 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKS3-SEPT12 ANKS3 chr16 4774751 - SEPT12 chr16 4829787 - Exonic hg19 ESCA TCGA-S8-A6BW-01A 2 16 In-Frame Intra-chr p13.3 p13.3 Seq+ 57557 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKS3-ZNF500 ANKS3 chr16 4764052 - ZNF500 chr16 4816077 - Exonic hg19 LIHC TCGA-WJ-A86L-01A 3 1 CDS-5'UTR Intra-chr p13.3 p13.3 Transcription factor 57558 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANKS6-STX17 ANKS6 chr9 101558415 - STX17 chr9 102677460 + Exonic hg19 CESC TCGA-JX-A3Q8-01A 4 3 CDS-5'UTR Intra-chr q22.33 q31.1 Seq+ 57559 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANLN-DGKB ANLN chr7 36436028 - DGKB chr7 14517850 - Exonic hg19 SARC TCGA-QQ-A5VA-01A 15 5 Out-of-frame Intra-chr p14.2 p21.2 Seq+ 57560 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANLN-EEPD1 ANLN chr7 36436028 - EEPD1 chr7 36336602 + Exonic hg19 LUAD TCGA-44-6778-01A 19 8 In-Frame Intra-chr p14.2 p14.2 Seq+ 57561 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANLN-POU6F2 ANLN chr7 36483471 - POU6F2 chr7 39125460 + Exonic hg19 BLCA TCGA-DK-A3IV-01A 3 5 In-Frame Intra-chr p14.2 p14.1 Tumor suppressor gene Transcription factor Seq+ 57562 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANLN-TMEM135 ANLN chr7 36478899 - TMEM135 chr11 86868383 + Exonic hg19 SARC TCGA-QQ-A5VA-01A 9 14 In-Frame Inter-chr p14.2 q14.2 Seq+ 57563 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANO1-ABCC11 ANO1 chr11 69972301 - ABCC11 chr16 48211024 - Exonic hg19 BRCA TCGA-C8-A138-01A 4 1 Out-of-frame Inter-chr q13.3 q12.1 57564 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANO1-ABHD15 ANO1 chr11 70028792 - ABHD15 chr17 27890104 - Exonic hg19 BRCA TCGA-C8-A1HK-01A 37 36 In-Frame Inter-chr q13.3 q11.2 Seq+ 57565 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANO1-CDC42BPG ANO1 chr11 69951894 - CDC42BPG chr11 64606374 - Exonic hg19 TGCT TCGA-2G-AAGP-01A 6 1 In-Frame Intra-chr q13.3 q13.1 57566 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANO1-CWF19L2 ANO1 chr11 69978185 - CWF19L2 chr11 107313775 - Exonic hg19 BLCA TCGA-CF-A8HX-01A 8 12 Out-of-frame Intra-chr q13.3 q22.3 Seq+ 57567 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANO1-CYP2R1 ANO1 chr11 69924820 - CYP2R1 chr11 14907463 - Exonic hg19 BRCA TCGA-A8-A097-01A 6 5 In-Frame Intra-chr q13.3 p15.2 Seq+ 57568 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANO1-FGF3 ANO1 chr11 69972301 - FGF3 chr11 69631191 - Exonic hg19 LUSC TCGA-56-8083-01A 97 37 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 57569 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANO1-KIF21A ANO1 chr11 69924820 - KIF21A chr12 39705355 - Exonic hg19 SKCM TCGA-EB-A5SH-06A 5 3 Out-of-frame Inter-chr q13.3 q12 Seq+ 57570 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANO1-RP11-680F20.9 ANO1 chr11 69972301 - RP11-680F20.9 chr11 125796001 - Exonic hg19 ESCA TCGA-IG-A3I8-01A 16 24 Out-of-frame Intra-chr q13.3 57571 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANO1-SLC7A8 ANO1 chr11 70017145 - SLC7A8 chr14 23635749 - Exonic hg19 LUSC TCGA-68-A59J-01A 32 21 In-Frame Inter-chr q13.3 q11.2 Seq+ 57572 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANO1-UNC5D ANO1 chr11 70017145 - UNC5D chr8 35406810 + Exonic hg19 BRCA TCGA-E9-A228-01A 14 17 In-Frame Inter-chr q13.3 p12 Tumor suppressor gene Seq+ 57573 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANO10-SCN5A ANO10 chr3 43474103 - SCN5A chr3 38629064 - Exonic hg19 STAD TCGA-CG-4436-01A 2 1 In-Frame Intra-chr p21.33 p22.2 57574 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANO2-NUDT3 ANO2 chr12 5915218 - NUDT3 chr6 34263462 - Exonic hg19 SARC TCGA-PC-A5DN-01A 24 20 In-Frame Inter-chr p13.31 p21.31 Seq+ 57575 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANO4-C12orf66 ANO4 chr12 101111325 - C12orf66 chr12 64609743 - Exonic hg19 SARC TCGA-FX-A2QS-01A 7 11 5'UTR-CDS Intra-chr q23.1 q14.2 Seq+ 57576 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANO4-NTS ANO4 chr12 101381448 - NTS chr12 86272123 + Exonic hg19 SARC TCGA-DX-A1L4-01A 39 17 Out-of-frame Intra-chr q23.1 q21.31 Seq+ 57577 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANO5-CARS ANO5 chr11 22215078 - CARS chr11 3063486 - Exonic hg19 SARC TCGA-DX-A3LT-01A 2 1 In-Frame Intra-chr p14.3 57578 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANO5-CPM ANO5 chr11 22297745 - CPM chr12 69252851 - Exonic hg19 SARC TCGA-DX-AB36-01A 22 16 Out-of-frame Inter-chr p14.3 q15 Seq+ 57579 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANO6-EDA ANO6 chr12 45797319 - EDA chrX 69080688 + Exonic hg19 SARC TCGA-QQ-A5VA-01A 20 6 Out-of-frame Inter-chr q12 q13.1 Seq+ 57580 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANO6-HNRNPUL1 ANO6 chr12 45610174 - HNRNPUL1 chr19 41774128 + Exonic hg19 LGG TCGA-S9-A7R3-01A 21 16 In-Frame Inter-chr q12 q13.2 Seq+ 57581 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANO6-IAPP ANO6 chr12 45816845 - IAPP chr12 21531171 + Exonic hg19 BRCA TCGA-E2-A1L8-01A 107 90 Out-of-frame Intra-chr q12 p12.1 Seq+ 57582 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANO6-PEBP4 ANO6 chr12 45610174 - PEBP4 chr8 22675248 - Exonic hg19 COAD TCGA-CM-5868-01A 6 4 Out-of-frame Inter-chr q12 p21.3 Seq+ 57583 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANO6-PKP2 ANO6 chr12 45771896 - PKP2 chr12 32955490 - Exonic hg19 OV TCGA-OY-A56P-01A 2 11 Out-of-frame Intra-chr q12 p11.21 Seq+ 57584 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANO7-PHC2 ANO7 chr2 242157796 - PHC2 chr1 33799893 - Exonic hg19 UCEC TCGA-DF-A2KR-01A 2 1 Out-of-frame Inter-chr q37.3 p35.1 57585 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANO7-RALBP1 ANO7 chr2 242157796 - RALBP1 chr18 9530832 + Exonic hg19 PRAD TCGA-YJ-A8SW-01A 26 22 Out-of-frame Inter-chr q37.3 p11.22 Seq+ 57586 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANO9-DEAF1 ANO9 chr11 428088 - DEAF1 chr11 654051 - Exonic hg19 BRCA TCGA-B6-A0X1-01A 7 2 Out-of-frame Intra-chr p15.5 Transcription factor Seq+ 57587 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANP32E-CTSK ANP32E chr1 150202906 - CTSK chr1 150769374 - Exonic hg19 OV TCGA-61-1918-01A 2 7 Out-of-frame Intra-chr q21.2 q21.3 Seq+ 57588 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANTXR1-APLF ANTXR1 chr2 69298919 - APLF chr2 68804952 + Exonic hg19 OV TCGA-24-1469-01A 6 1 In-Frame Intra-chr p13.3 p13.3 Seq+ 57589 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANXA1-TLN1 ANXA1 chr9 75785309 - TLN1 chr9 35720506 - Exonic hg19 HNSC TCGA-MT-A51X-01A 2 1 3'UTR-CDS Intra-chr q21.13 Tumor suppressor gene p13.3 57590 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANXA10-FAM198B ANXA10 chr4 169049316 - FAM198B chr4 159052164 - Exonic hg19 BRCA TCGA-BH-A1FL-01A 2 1 Out-of-frame Intra-chr q32.3 q32.1 Seq+ 57591 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANXA2-RNF114 ANXA2 chr15 60643392 - RNF114 chr20 48565785 + Exonic hg19 BRCA TCGA-C8-A12P-01A 319 422 In-Frame Inter-chr q22.2 q13.13 Seq+ 57592 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANXA4-GKN1 ANXA4 chr2 70008706 - GKN1 chr2 69204627 + Exonic hg19 BLCA TCGA-DK-AA75-01A 6 1 5'UTR-CDS Intra-chr p13.3 p13.3 Tumor suppressor gene Seq+ 57593 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANXA4-PKN1 ANXA4 chr2 70008706 - PKN1 chr19 14578377 + Exonic hg19 LIHC TCGA-BC-4072-01B 1077 603 5'UTR-CDS Inter-chr p13.3 p13.12 AGC:PKN Seq+ 57594 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANXA6-UTRN ANXA6 chr5 150480670 - UTRN chr6 144665237 + Exonic hg19 LUAD TCGA-86-6851-01A 2 3 Out-of-frame Inter-chr q33.1 q24.2 57595 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ANXA7-LGALS12 ANXA7 chr10 75156277 - LGALS12 chr11 63276025 + Exonic hg19 BRCA TCGA-AN-A0AS-01A 8 5 In-Frame Inter-chr q22.2 Tumor suppressor gene q12.3 Seq+ 57596 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AOAH-ELMO1 AOAH chr7 36698771 - ELMO1 chr7 36934622 - Exonic hg19 LUSC TCGA-77-7140-01A 126 127 In-Frame Intra-chr p14.2 p14.1 Seq+ 57597 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP000295.9-C21orf49 AP000295.9 chr21 34625135 - C21orf49 chr21 34157108 + Exonic hg19 LUAD TCGA-O1-A52J-01A 5 3 Out-of-frame Intra-chr 57598 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP000769.1-CDC42EP2 AP000769.1 chr11 65222802 - CDC42EP2 chr11 65088015 + Exonic hg19 UCEC TCGA-A5-A7WK-01A 4 2 Out-of-frame Intra-chr q13.1 q13.1 57599 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP000769.1-DPF2 AP000769.1 chr11 65222802 - DPF2 chr11 65116321 + Exonic hg19 LUSC TCGA-77-8153-01A 5 3 Out-of-frame Intra-chr q13.1 q13.1 57600 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP002478.1-CRYBA1 AP002478.1 chr18 3594238 - CRYBA1 chr17 27577200 + Exonic hg19 SARC TCGA-DX-A3M1-01A 6 2 Out-of-frame Inter-chr p11.31 q11.2 57601 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP002478.1-TAF3 AP002478.1 chr18 3594482 - TAF3 chr10 8005883 + Exonic hg19 BLCA TCGA-ZF-AA4T-01A 19 6 Out-of-frame Inter-chr p11.31 p14 57602 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP1AR-NDST4 AP1AR chr4 113153330 - NDST4 chr4 115792106 - Exonic hg19 PRAD TCGA-HC-7738-01A 23 12 Out-of-frame Intra-chr q25 q26 Tumor suppressor gene Seq+ 57603 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP1B1-ADRBK2 AP1B1 chr22 29750639 - ADRBK2 chr22 26091074 + Exonic hg19 BLCA TCGA-C4-A0F7-01A 19 8 In-Frame Intra-chr q12.2 Seq+ 57604 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP1B1-CLCN3 AP1B1 chr22 29723671 - CLCN3 chr4 170623929 + Exonic hg19 BLCA TCGA-BT-A3PH-01A 2 5 Out-of-frame Inter-chr q12.2 q33 57605 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP1B1-CLTCL1 AP1B1 chr22 29784413 - CLTCL1 chr22 19222229 - Exonic hg19 PRAD TCGA-VP-A875-01A 11 4 5'UTR-CDS Intra-chr q12.2 q11.21 Seq+ 57606 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP1B1-NIPSNAP1 AP1B1 chr22 29745207 - NIPSNAP1 chr22 29954942 - Exonic hg19 BLCA TCGA-FD-A5BT-01A 5 2 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 57607 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP1B1-SGSM3 AP1B1 chr22 29734979 - SGSM3 chr22 40796700 + Exonic hg19 GBM TCGA-41-2572-01A 3 4 CDS-5'UTR Intra-chr q12.2 q13.1 Seq+ 57608 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP1G1-MTSS1L AP1G1 chr16 71779047 - MTSS1L chr16 70698999 - Exonic hg19 SARC TCGA-DX-AB2Q-01A 3 1 Out-of-frame Intra-chr q22.2 q22.1 57609 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP1G1-PMFBP1 AP1G1 chr16 71803526 - PMFBP1 chr16 72188358 - Exonic hg19 LIHC TCGA-DD-A73C-01A 23 19 In-Frame Intra-chr q22.2 q22.2 Seq+ 57610 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP1M1-CYP4F11 AP1M1 chr19 16319988 - CYP4F11 chr19 16045219 - Exonic hg19 LUAD TCGA-05-4426-01A 4 3 CDS-5'UTR Intra-chr p13.11 p13.12 Seq+ 57611 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP1M1-PYCR1 AP1M1 chr19 16319988 - PYCR1 chr17 79894069 - Exonic hg19 SARC TCGA-DX-A6B9-01A 6 3 Out-of-frame Inter-chr p13.11 q25.3 Seq+ 57612 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP1M1-RAB8A AP1M1 chr19 16319988 - RAB8A chr19 16236280 + Exonic hg19 BRCA TCGA-AC-A5EH-01A 15 15 In-Frame Intra-chr p13.11 p13.11 Seq+ 57613 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP1M1-ZNF93 AP1M1 chr19 16319988 - ZNF93 chr19 20043991 + Exonic hg19 BRCA TCGA-BH-A0BR-01A 26 38 Out-of-frame Intra-chr p13.11 p12 Transcription factor Seq+ 57614 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP1S1-PTOV1 AP1S1 chr7 100797798 - PTOV1 chr19 50357663 + Exonic hg19 UCS TCGA-N8-A56S-01A 10 53 In-Frame Inter-chr q22.1 q13.33 Seq+ 57615 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP2A1-DHDH AP2A1 chr19 50270457 - DHDH chr19 49442706 + Exonic hg19 BRCA TCGA-A2-A25D-01A 165 177 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 57616 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP2A1-VRK3 AP2A1 chr19 50295321 - VRK3 chr19 50482499 - Exonic hg19 SKCM TCGA-D3-A2JN-06A 2 1 Out-of-frame Intra-chr q13.33 q13.33 CK1:VRK Seq+ 57617 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP2A2-AP006621.5 AP2A2 chr11 994245 - AP006621.5 chr11 783530 + Exonic hg19 LIHC TCGA-BW-A5NO-01A 3 1 Out-of-frame Intra-chr p15.5 p15.5 57618 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP2A2-EPS8L2 AP2A2 chr11 994245 - EPS8L2 chr11 720062 + Exonic hg19 LUSC TCGA-21-1071-01A 8 6 In-Frame Intra-chr p15.5 p15.5 Seq+ 57619 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP2A2-NLRC5 AP2A2 chr11 959505 - NLRC5 chr16 57067516 + Exonic hg19 UCEC TCGA-PG-A914-01A 6 6 Out-of-frame Inter-chr p15.5 q13 Seq+ 57620 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP2A2-PSMD13 AP2A2 chr11 977224 - PSMD13 chr11 252505 + Exonic hg19 LUSC TCGA-66-2758-01A 361 161 In-Frame Intra-chr p15.5 p15.5 Seq+ 57621 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP2A2-TALDO1 AP2A2 chr11 926088 - TALDO1 chr11 755879 + Exonic hg19 STAD TCGA-BR-7901-01A 4 31 In-Frame Intra-chr p15.5 p15.5 Seq+ 57622 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP2A2-TMEM80 AP2A2 chr11 959505 - TMEM80 chr11 700615 + Exonic hg19 BRCA TCGA-A8-A07L-01A 30 5 In-Frame Intra-chr p15.5 p15.5 Seq+ 57623 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP2A2-TMEM80 AP2A2 chr11 926088 - TMEM80 chr11 698869 + Exonic hg19 UCS TCGA-N6-A4VG-01A 58 33 In-Frame Intra-chr p15.5 p15.5 Seq+ 57624 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP2A2-TOLLIP AP2A2 chr11 926088 - TOLLIP chr11 1298483 - Exonic hg19 SKCM TCGA-FS-A1ZA-06A 68 43 In-Frame Intra-chr p15.5 p15.5 Seq+ 57625 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP2A2-TRIM22 AP2A2 chr11 926088 - TRIM22 chr11 5718478 + Exonic hg19 HNSC TCGA-CV-7424-01A 2 4 Out-of-frame Intra-chr p15.5 p15.4 Seq+ 57626 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP2A2-TSPAN4 AP2A2 chr11 946963 - TSPAN4 chr11 862550 + Exonic hg19 BLCA TCGA-DK-A6B2-01A 17 12 CDS-5'UTR Intra-chr p15.5 p15.5 Seq+ 57627 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP2A2-VPS26A AP2A2 chr11 959505 - VPS26A chr10 70916763 + Exonic hg19 UCEC TCGA-B5-A0JN-01A 22 27 In-Frame Inter-chr p15.5 q22.1 Seq+ 57628 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP2B1-GAS2L2 AP2B1 chr17 33984810 - GAS2L2 chr17 34077337 - Exonic hg19 ESCA TCGA-R6-A8W8-01B 2 11 Out-of-frame Intra-chr q12 q12 Seq+ 57629 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP2M1-SEC63 AP2M1 chr3 183901878 - SEC63 chr6 108214782 - Exonic hg19 LUSC TCGA-58-8388-01A 2 4 Out-of-frame Inter-chr q27.1 q21 57630 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP2M1-SEC63 AP2M1 chr3 183901878 - SEC63 chr6 108214782 - Exonic hg19 THCA TCGA-IM-A3ED-01A 2 2 Out-of-frame Inter-chr q27.1 q21 57631 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP2M1-TYK2 AP2M1 chr3 183901878 - TYK2 chr19 10491352 - Exonic hg19 HNSC TCGA-CR-7374-01A 2 15 Out-of-frame Inter-chr q27.1 p13.2 TK:JakA 57632 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP3B1-CAMLG AP3B1 chr5 77511879 - CAMLG chr5 134086449 + Exonic hg19 STAD TCGA-VQ-AA6J-01A 22 142 In-Frame Intra-chr q14.1 q31.1 Seq+ 57633 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP3B1-DCTN4 AP3B1 chr5 77423854 - DCTN4 chr5 150136049 - Exonic hg19 KIRC TCGA-BP-4986-01A 2 2 In-Frame Intra-chr q14.1 q33.1 Seq+ 57634 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP3B1-IPO11 AP3B1 chr5 77590276 - IPO11 chr5 61762958 + Exonic hg19 SKCM TCGA-D3-A51N-06A 5 2 Out-of-frame Intra-chr q14.1 q12.1 Seq+ 57635 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP3B1-LHFPL2 AP3B1 chr5 77536686 - LHFPL2 chr5 77860694 - Exonic hg19 SKCM TCGA-GN-A26D-06A 38 21 CDS-5'UTR Intra-chr q14.1 q14.1 Seq+ 57636 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP3B2-HOMER2 AP3B2 chr15 83378346 - HOMER2 chr15 83561593 - Exonic hg19 PRAD TCGA-CH-5751-01A 7 5 In-Frame Intra-chr q25.2 q25.2 Tumor suppressor gene Seq+ 57637 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP3D1-DOT1L AP3D1 chr19 2151238 - DOT1L chr19 2210399 + Exonic hg19 PAAD TCGA-3A-A9IH-01A 4 2 In-Frame Intra-chr p13.3 p13.3 Oncogene Transcription factor Seq+ 57638 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP3D1-DOT1L AP3D1 chr19 2151238 - DOT1L chr19 2180712 + Exonic hg19 BLCA TCGA-GV-A40G-01A 2 2 In-Frame Intra-chr p13.3 p13.3 Oncogene Transcription factor Seq+ 57639 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP3D1-KCTD19 AP3D1 chr19 2137726 - KCTD19 chr16 67354788 - Exonic hg19 PRAD TCGA-VP-A875-01A 4 7 In-Frame Inter-chr p13.3 q22.1 Seq+ 57640 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP3D1-MUM1 AP3D1 chr19 2108686 - MUM1 chr19 1356323 + Exonic hg19 LUAD TCGA-67-6217-01A 2 1 CDS-5'UTR Intra-chr p13.3 p13.3 Tumor suppressor gene Seq+ 57641 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP3D1-PLEKHF1 AP3D1 chr19 2151238 - PLEKHF1 chr19 30164731 + Exonic hg19 STAD TCGA-R5-A7ZE-01B 14 51 CDS-5'UTR Intra-chr p13.3 q12 Seq+ 57642 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AP4B1-C1orf88 AP4B1 chr1 114444377 - C1orf88 chr1 111889532 + Exonic hg19 BLCA TCGA-4Z-AA84-01A 4 2 In-Frame Intra-chr p13.2 57643 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APAF1-HOXC10 APAF1 chr12 99042275 - HOXC10 chr12 54382953 + Exonic hg19 STAD TCGA-BR-7959-01A 32 151 Out-of-frame Intra-chr q23.1 Tumor suppressor gene q13.13 Transcription factor Seq+ 57644 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APAF1-LRRIQ1 APAF1 chr12 99093347 - LRRIQ1 chr12 85638567 + Exonic hg19 UCEC TCGA-DI-A2QY-01A 2 1 In-Frame Intra-chr q23.1 Tumor suppressor gene q21.31 Seq+ 57645 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APBA1-RAD23B APBA1 chr9 72287069 - RAD23B chr9 110068660 + Exonic hg19 PRAD TCGA-KK-A8I9-01A 4 5 5'UTR-CDS Intra-chr q21.12 q31.2 Tumor suppressor gene Seq+ 57646 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APBA1-SUSD1 APBA1 chr9 72071163 - SUSD1 chr9 114804240 - Exonic hg19 SARC TCGA-K1-A6RU-01A 11 6 5'UTR-CDS Intra-chr q21.12 q32 Seq+ 57647 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APBA2-GABRB3 APBA2 chr15 29288009 - GABRB3 chr15 26828561 - Exonic hg19 BRCA TCGA-A7-A26G-01A 5 4 5'UTR-CDS Intra-chr q12 Seq+ 57648 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APBA2-OCA2 APBA2 chr15 29213952 - OCA2 chr15 28117068 - Exonic hg19 MESO TCGA-TS-A7OY-01A 7 5 5'UTR-CDS Intra-chr q13.1 Seq+ 57649 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APBA2-RP11-536G4.1 APBA2 chr15 29367204 - RP11-536G4.1 chr12 96216867 + Exonic hg19 LUAD TCGA-44-7672-01A 3 1 Out-of-frame Inter-chr 57650 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APBA2-SOAT2 APBA2 chr15 29288009 - SOAT2 chr12 53512674 + Exonic hg19 SKCM TCGA-RP-A695-06A 22 3 5'UTR-CDS Inter-chr q13.13 Seq+ 57651 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APBB1IP-DNAJC1 APBB1IP chr10 26830621 - DNAJC1 chr10 22218070 - Exonic hg19 SKCM TCGA-ER-A196-01A 43 32 In-Frame Intra-chr p12.1 p12.31 Seq+ 57652 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APBB2-DMD APBB2 chr4 40823888 - DMD chrX 31525570 - Exonic hg19 BRCA TCGA-A2-A0T0-01A 5 1 In-Frame Inter-chr p13 p21.1 Tumor suppressor gene 57653 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APBB2-NSUN7 APBB2 chr4 40827904 - NSUN7 chr4 40810324 + Exonic hg19 BRCA TCGA-E9-A22E-01A 8 3 Out-of-frame Intra-chr p13 p14 Seq+ 57654 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APC-ALDH1L1 APC chr5 112043579 - ALDH1L1 chr3 125879845 - Exonic hg19 KIRC TCGA-CJ-4886-01A 38 30 5'UTR-5'UTR Inter-chr q22.2 Oncogene Tumor suppressor gene q21.3 Seq+ 57655 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APC-C5orf13 APC chr5 112043579 - C5orf13 chr5 111071204 - Exonic hg19 SKCM TCGA-ER-A195-06A 13 7 Out-of-frame Intra-chr q22.2 Oncogene Tumor suppressor gene 57656 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APC-KIAA0825 APC chr5 112128226 - KIAA0825 chr5 93489829 - Exonic hg19 PRAD TCGA-CH-5788-01A 4 5 Out-of-frame Intra-chr q22.2 Oncogene Tumor suppressor gene q15 Seq+ 57657 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APC-REEP2 APC chr5 112137080 - REEP2 chr5 137781372 + Exonic hg19 ACC TCGA-OR-A5JX-01A 6 2 In-Frame Intra-chr q22.2 Oncogene Tumor suppressor gene q31.2 Seq+ 57658 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APC-SLC27A6 APC chr5 112043579 - SLC27A6 chr5 128364038 + Exonic hg19 SKCM TCGA-BF-AAP6-01A 55 52 Out-of-frame Intra-chr q22.2 Oncogene Tumor suppressor gene q23.3 Seq+ 57659 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APC2-GIGYF2 APC2 chr19 1473237 - GIGYF2 chr2 233632812 + Exonic hg19 LGG TCGA-DH-5144-01A 2 1 Out-of-frame Inter-chr p13.3 q37.1 57660 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APCDD1-TRAPPC8 APCDD1 chr18 10455036 - TRAPPC8 chr18 29435770 - Exonic hg19 LUAD TCGA-38-4632-01A 4 4 Out-of-frame Intra-chr p11.22 q12.1 57661 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APH1A-SLAMF1 APH1A chr1 150239475 - SLAMF1 chr1 160580588 - Exonic hg19 LUAD TCGA-L9-A444-01A 57 16 In-Frame Intra-chr q21.2 q23.3 Seq+ 57662 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq API5-GANC API5 chr11 43343686 - GANC chr15 42598744 + Exonic hg19 SKCM TCGA-FS-A4FB-06A 17 29 In-Frame Inter-chr p12 q15.1 Seq+ 57663 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APIP-C10orf35 APIP chr11 34937775 - C10orf35 chr10 71391236 + Exonic hg19 BRCA TCGA-E2-A15D-01A 11 1 CDS-5'UTR Inter-chr p13 q22.1 Seq+ 57664 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APIP-S100A13 APIP chr11 34937775 - S100A13 chr1 153599009 - Exonic hg19 PCPG TCGA-RW-A686-01A 17 6 CDS-5'UTR Inter-chr p13 q21.3 Seq+ 57665 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APIP-S100A13 APIP chr11 34937775 - S100A13 chr1 153599009 - Exonic hg19 PCPG TCGA-RW-A686-06A 21 16 CDS-5'UTR Inter-chr p13 q21.3 Seq+ 57666 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APIP-SLC1A2 APIP chr11 34909840 - SLC1A2 chr11 35287305 - Exonic hg19 CESC TCGA-IR-A3LK-01A 6 4 In-Frame Intra-chr p13 p13 KB Pub Seq+ 57667 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APLP2-C7 APLP2 chr11 130014699 - C7 chr5 40954982 + Exonic hg19 THCA TCGA-DJ-A3V9-01A 2 238 Out-of-frame Inter-chr q24.3 p13.1 Tumor suppressor gene 57668 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APLP2-C7 APLP2 chr11 130014699 - C7 chr5 40954982 + Exonic hg19 KICH TCGA-KL-8325-01A 2 19 Out-of-frame Inter-chr q24.3 p13.1 Tumor suppressor gene 57669 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APLP2-C7 APLP2 chr11 130014699 - C7 chr5 40954982 + Exonic hg19 KICH TCGA-KO-8403-01A 2 133 Out-of-frame Inter-chr q24.3 p13.1 Tumor suppressor gene 57670 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APLP2-CD40 APLP2 chr11 130014699 - CD40 chr20 44754189 + Exonic hg19 THCA TCGA-EL-A3TB-01A 2 31 Out-of-frame Inter-chr q24.3 q13.12 57671 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APLP2-EEA1 APLP2 chr11 130014699 - EEA1 chr12 93229203 - Exonic hg19 THCA TCGA-BJ-A45I-01A 2 85 Out-of-frame Inter-chr q24.3 q22 Transcription factor 57672 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APLP2-EIF2AK2 APLP2 chr11 130014699 - EIF2AK2 chr2 37342384 - Exonic hg19 LUAD TCGA-75-7025-01A 2 126 Out-of-frame Inter-chr q24.3 p22.2 57673 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APLP2-EIF2AK2 APLP2 chr11 130014699 - EIF2AK2 chr2 37342384 - Exonic hg19 BLCA TCGA-FD-A3SR-01A 2 22 Out-of-frame Inter-chr q24.3 p22.2 57674 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APLP2-KCNJ5 APLP2 chr11 129939977 - KCNJ5 chr11 128781159 + Exonic hg19 BRCA TCGA-AN-A0FS-01A 13 21 5'UTR-5'UTR Intra-chr q24.3 q24.3 Seq+ 57675 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APLP2-PLAT APLP2 chr11 130014699 - PLAT chr8 42051245 - Exonic hg19 PRAD TCGA-HC-7213-01A 2 53 Out-of-frame Inter-chr q24.3 p11.21 57676 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APLP2-PLEKHA5 APLP2 chr11 130014699 - PLEKHA5 chr12 19441012 + Exonic hg19 KIRC TCGA-A3-3319-01A 2 32 Out-of-frame Inter-chr q24.3 p12.3 57677 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APLP2-TYK2 APLP2 chr11 130014699 - TYK2 chr19 10491352 - Exonic hg19 THYM TCGA-ZL-A9V6-01A 2 6 Out-of-frame Inter-chr q24.3 p13.2 TK:JakA 57678 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APOA2-ITPR2 APOA2 chr1 161192082 - ITPR2 chr12 26775338 - Exonic hg19 LIHC TCGA-2Y-A9HA-01A 2 1 3'UTR-CDS Inter-chr q23.3 p11.23 57679 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APOA2-ITPR2 APOA2 chr1 161192082 - ITPR2 chr12 26775338 - Exonic hg19 LIHC TCGA-BC-A69I-01A 2 1 3'UTR-CDS Inter-chr q23.3 p11.23 57680 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APOA2-TYK2 APOA2 chr1 161192082 - TYK2 chr19 10491352 - Exonic hg19 LIHC TCGA-G3-A3CH-01A 2 125 Out-of-frame Inter-chr q23.3 p13.2 TK:JakA 57681 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APOC1-IQCE APOC1 chr19 45422606 - IQCE chr7 2641075 + Exonic hg19 LUAD TCGA-86-A4P7-01A 2 15 3'UTR-CDS Inter-chr q13.32 p22.3 57682 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APOC1-RABEP1 APOC1 chr19 45422606 - RABEP1 chr17 5283828 + Exonic hg19 SKCM TCGA-D3-A1QB-06A 2 35 Out-of-frame Inter-chr q13.32 p13.2 57683 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APOC1-SLC38A4 APOC1 chr19 45422606 - SLC38A4 chr12 47226191 - Exonic hg19 LIHC TCGA-2Y-A9HB-01A 2 1 Out-of-frame Inter-chr q13.32 q13.11 57684 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APOD-CLDN7 APOD chr3 195295573 - CLDN7 chr17 7166264 - Exonic hg19 BRCA TCGA-OL-A5D6-01A 2 3 3'UTR-5'UTR Inter-chr q29 p13.1 57685 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APOE-ARFGEF2 APOE chr19 45412650 - ARFGEF2 chr20 47615777 + Exonic hg19 LIHC TCGA-G3-A25U-01A 2 36 Out-of-frame Inter-chr q13.32 q13.13 57686 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APOE-CCT5 APOE chr19 45412650 - CCT5 chr5 10250033 + Exonic hg19 KIRC TCGA-A3-3313-01A 2 5 Out-of-frame Inter-chr q13.32 p15.2 57687 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APOE-CCT5 APOE chr19 45412650 - CCT5 chr5 10250033 + Exonic hg19 LIHC TCGA-DD-A1EI-01A 2 35 Out-of-frame Inter-chr q13.32 p15.2 57688 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APOE-CLCN3 APOE chr19 45412650 - CLCN3 chr4 170623929 + Exonic hg19 ACC TCGA-OR-A5K9-01A 2 163 Out-of-frame Inter-chr q13.32 q33 57689 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APOE-DSP APOE chr19 45412650 - DSP chr6 7575528 + Exonic hg19 LIHC TCGA-DD-AACJ-01A 2 1 3'UTR-CDS Inter-chr q13.32 p24.3 Tumor suppressor gene 57690 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APOE-IQGAP2 APOE chr19 45412650 - IQGAP2 chr5 75700249 + Exonic hg19 LIHC TCGA-DD-A4NR-01A 2 1 Out-of-frame Inter-chr q13.32 q13.3 Tumor suppressor gene 57691 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APOE-SNW1 APOE chr19 45412650 - SNW1 chr14 78189203 - Exonic hg19 LIHC TCGA-BC-A8YO-01A 2 16 Out-of-frame Inter-chr q13.32 q24.3 57692 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APOL2-ULK2 APOL2 chr22 36627386 - ULK2 chr17 19729499 - Exonic hg19 LUSC TCGA-33-6737-01A 24 7 Out-of-frame Inter-chr q12.3 p11.2 Other:ULK Seq+ 57693 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APOL6-CUX2 APOL6 chr22 36044670 - CUX2 chr12 111772245 + Exonic hg19 LIHC TCGA-DD-AAVW-01A 5 1 5'UTR-CDS Inter-chr q12.3 q24.11 Transcription factor Seq+ 57694 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APOLD1-CDKN1B APOLD1 chr12 12879030 - CDKN1B chr12 12873970 + Exonic hg19 BRCA TCGA-AQ-A04J-01A 9 13 CDS-3'UTR Intra-chr p13.1 p13.1 Tumor suppressor gene Seq+ 57695 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APP-CCT8 APP chr21 27542882 - CCT8 chr21 30442658 - Exonic hg19 SKCM TCGA-ER-A42L-06A 19 14 In-Frame Intra-chr q21.3 q21.3 Seq+ 57696 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APP-EEA1 APP chr21 27252862 - EEA1 chr12 93229203 - Exonic hg19 LGG TCGA-HT-7610-01A 2 1 Out-of-frame Inter-chr q21.3 q22 Transcription factor 57697 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APP-RCAN1 APP chr21 27484296 - RCAN1 chr21 35896008 - Exonic hg19 BRCA TCGA-A8-A08P-01A 32 75 In-Frame Intra-chr q21.3 q22.12 Seq+ 57698 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APP-SEC63 APP chr21 27252862 - SEC63 chr6 108214782 - Exonic hg19 THCA TCGA-DJ-A13S-01A 2 1 Out-of-frame Inter-chr q21.3 q21 57699 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APPBP2-CA10 APPBP2 chr17 58577760 - CA10 chr17 49711011 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 12 15 Out-of-frame Intra-chr q23.2 q22 Seq+ 57700 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APPBP2-DNAH17 APPBP2 chr17 58603155 - DNAH17 chr17 76437281 - Exonic hg19 BRCA TCGA-C8-A1HL-01A 2 6 Out-of-frame Intra-chr q23.2 q25.3 Seq+ 57701 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APPBP2-SEPT9 APPBP2 chr17 58577760 - SEPT9 chr17 75486824 + Exonic hg19 BRCA TCGA-EW-A2FS-01A 2 3 In-Frame Intra-chr q23.2 57702 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APPBP2-SETD2 APPBP2 chr17 58571827 - SETD2 chr3 47061330 - Exonic hg19 SARC TCGA-DX-A6YS-01A 10 14 Out-of-frame Inter-chr q23.2 p21.31 Oncogene Tumor suppressor gene Seq+ 57703 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APPBP2-WISP2 APPBP2 chr17 58556509 - WISP2 chr20 43348538 + Exonic hg19 BRCA TCGA-AC-A62V-01A 4 2 Out-of-frame Inter-chr q23.2 q13.12 57704 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APPL1-SPATA12 APPL1 chr3 57287766 - SPATA12 chr3 57107394 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 7 5 CDS-5'UTR Intra-chr p14.3 p14.3 Seq+ 57705 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APPL2-CIT APPL2 chr12 105629737 - CIT chr12 120198859 - Exonic hg19 LUSC TCGA-34-5232-01A 14 11 In-Frame Intra-chr q23.3 q24.23 Seq+ 57706 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APPL2-NR0B1 APPL2 chr12 105597481 - NR0B1 chrX 30322940 - Exonic hg19 UCEC TCGA-AJ-A3BD-01A 3 1 Out-of-frame Inter-chr q23.3 p21.2 Transcription factor 57707 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APPL2-TUBA1C APPL2 chr12 105622903 - TUBA1C chr12 49663248 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 15 4 In-Frame Intra-chr q23.3 q13.12 Seq+ 57708 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APTX-ARL5B APTX chr9 32987758 - ARL5B chr10 18961551 + Exonic hg19 LUSC TCGA-39-5037-01A 3 2 In-Frame Inter-chr p21.1 p12.31 Seq+ 57709 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APTX-GNE APTX chr9 33001565 - GNE chr9 36220017 - Exonic hg19 BRCA TCGA-E2-A15H-01A 3 10 Out-of-frame Intra-chr p21.1 p13.3 Seq+ 57710 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq APTX-NOL6 APTX chr9 33001565 - NOL6 chr9 33472410 - Exonic hg19 HNSC TCGA-CR-7376-01A 5 10 Out-of-frame Intra-chr p21.1 p13.3 Seq+ 57711 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AQP1-ARFGEF2 AQP1 chr7 30965131 - ARFGEF2 chr20 47615777 + Exonic hg19 KIRP TCGA-BQ-7051-01A 2 5 Out-of-frame Inter-chr p14.3 q13.13 57712 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AQP1-CFB AQP1 chr7 30965131 - CFB chr6 31913427 + Exonic hg19 LUAD TCGA-55-7816-01A 2 2 Out-of-frame Inter-chr p14.3 57713 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AQP1-CHI3L2 AQP1 chr7 30965131 - CHI3L2 chr1 111772314 + Exonic hg19 LGG TCGA-HT-A5RC-01A 2 26 Out-of-frame Inter-chr p14.3 p13.2 57714 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AQP1-TYK2 AQP1 chr7 30965131 - TYK2 chr19 10491352 - Exonic hg19 BRCA TCGA-A2-A3XY-01A 2 15 Out-of-frame Inter-chr p14.3 p13.2 TK:JakA 57715 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AQP2-FOXP1 AQP2 chr12 50352664 - FOXP1 chr3 71007472 - Exonic hg19 KIRC TCGA-B0-5691-01A 2 1 Out-of-frame Inter-chr q13.12 p13 Oncogene Tumor suppressor gene Transcription factor 57716 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AQP3-B2M AQP3 chr9 33441152 - B2M chr15 45003720 + Exonic hg19 LUSC TCGA-85-7697-01A 2 1 3'UTR-5'UTR Inter-chr p13.3 Oncogene 57717 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AR-NR4A3 AR chrX 66863249 - NR4A3 chr9 102587941 + Exonic hg19 LIHC TCGA-G3-A7M8-01A 6 2 CDS-5'UTR Inter-chr q12 Oncogene Tumor suppressor gene Transcription factor q31.1 Tumor suppressor gene Transcription factor Seq+ 57718 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARAP1-DYNC2H1 ARAP1 chr11 72432895 - DYNC2H1 chr11 103062246 + Exonic hg19 SKCM TCGA-ER-A3EV-06A 2 1 5'UTR-CDS Intra-chr q13.4 q22.3 Seq+ 57719 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARAP1-FADD ARAP1 chr11 72412694 - FADD chr11 70052239 + Exonic hg19 LUAD TCGA-44-A4SU-01A 9 3 In-Frame Intra-chr q13.4 q13.3 Tumor suppressor gene Seq+ 57720 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARAP1-MOGAT2 ARAP1 chr11 72410050 - MOGAT2 chr11 75431037 + Exonic hg19 BRCA TCGA-AN-A03Y-01A 23 10 Out-of-frame Intra-chr q13.4 q13.5 Seq+ 57721 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARAP1-RP11-831H9.11 ARAP1 chr11 72463373 - RP11-831H9.11 chr11 62417471 - Exonic hg19 BRCA TCGA-AR-A24L-01A 15 21 Out-of-frame Intra-chr q13.4 57722 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARAP1-SLC22A8 ARAP1 chr11 72404370 - SLC22A8 chr11 62782455 - Exonic hg19 BLCA TCGA-KQ-A41O-01A 7 4 CDS-5'UTR Intra-chr q13.4 q12.3 Seq+ 57723 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARAP1-USP35 ARAP1 chr11 72443560 - USP35 chr11 77907282 + Exonic hg19 BRCA TCGA-A1-A0SM-01A 2 1 5'UTR-5'UTR Intra-chr q13.4 q14.1 57724 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARAP2-PDS5A ARAP2 chr4 36093503 - PDS5A chr4 39871082 - Exonic hg19 LUSC TCGA-77-A5G6-01A 9 4 In-Frame Intra-chr p14 p14 Seq+ 57725 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARAP2-PRRC1 ARAP2 chr4 36148918 - PRRC1 chr5 126883511 + Exonic hg19 UCS TCGA-N7-A59B-01A 2 5 In-Frame Inter-chr p14 q23.2 57726 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARF1-HSPA9 ARF1 chr1 228270466 - HSPA9 chr5 137904738 - Exonic hg19 PRAD TCGA-KK-A6E1-01A 54 130 5'UTR-CDS Inter-chr q42.13 Tumor suppressor gene q31.2 Seq+ 57727 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARF3-CHFR ARF3 chr12 49334731 - CHFR chr12 133454240 - Exonic hg19 LUAD TCGA-55-6712-01A 14 2 In-Frame Intra-chr q13.12 q24.33 Tumor suppressor gene Seq+ 57728 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARF3-WNT10B ARF3 chr12 49351093 - WNT10B chr12 49364352 - Exonic hg19 PAAD TCGA-HV-A5A5-01A 9 7 5'UTR-5'UTR Intra-chr q13.12 q13.12 Seq+ 57729 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARFGAP1-SPAG4 ARFGAP1 chr20 61904272 - SPAG4 chr20 34207117 + Exonic hg19 BRCA TCGA-A1-A0SQ-01A 10 6 5'UTR-CDS Intra-chr q13.33 q11.22 Seq+ 57730 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARFGAP1-UQCC ARFGAP1 chr20 61906992 - UQCC chr20 33981999 - Exonic hg19 BRCA TCGA-BH-A0H7-01A 20 8 In-Frame Intra-chr q13.33 Seq+ 57731 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARFGAP2-CELF1 ARFGAP2 chr11 47198067 - CELF1 chr11 47508793 - Exonic hg19 BRCA TCGA-BH-A0B9-01A 14 16 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 57732 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARFGAP2-FBRSL1 ARFGAP2 chr11 47187819 - FBRSL1 chr12 133144067 + Exonic hg19 PRAD TCGA-YL-A8HL-01A 9 7 In-Frame Inter-chr p11.2 q24.33 Seq+ 57733 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARFGAP3-FBLN1 ARFGAP3 chr22 43253120 - FBLN1 chr22 45996187 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 87 38 Out-of-frame Intra-chr q13.2 q13.31 Tumor suppressor gene Seq+ 57734 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARFGAP3-LSM10 ARFGAP3 chr22 43243520 - LSM10 chr1 36859754 - Exonic hg19 UCS TCGA-N9-A4Q4-01A 26 9 CDS-5'UTR Inter-chr q13.2 p34.3 Seq+ 57735 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARFGAP3-PACSIN2 ARFGAP3 chr22 43253120 - PACSIN2 chr22 43289619 - Exonic hg19 LUSC TCGA-94-8491-01A 5 2 In-Frame Intra-chr q13.2 q13.2 57736 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARFGEF1-CCDC94 ARFGEF1 chr8 68123718 - CCDC94 chr19 4261991 + Exonic hg19 SARC TCGA-DX-A23Z-01A 5 14 Out-of-frame Inter-chr q13.2 p13.3 Seq+ 57737 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARFGEF1-CPA6 ARFGEF1 chr8 68150970 - CPA6 chr8 68397024 - Exonic hg19 BRCA TCGA-A8-A09N-01A 12 3 In-Frame Intra-chr q13.2 q13.2 Seq+ 57738 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARFGEF1-CPA6 ARFGEF1 chr8 68255399 - CPA6 chr8 68334926 - Exonic hg19 BRCA TCGA-E2-A14Y-01A 39 29 In-Frame Intra-chr q13.2 q13.2 Seq+ 57739 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARFGEF1-CSPP1 ARFGEF1 chr8 68150578 - CSPP1 chr8 68024207 + Exonic hg19 COAD TCGA-RU-A8FL-01A 10 14 In-Frame Intra-chr q13.2 q13.1 Seq+ 57740 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARFGEF1-LGR5 ARFGEF1 chr8 68163534 - LGR5 chr12 71898394 + Exonic hg19 SARC TCGA-3R-A8YX-01A 4 4 Out-of-frame Inter-chr q13.2 q21.1 57741 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARFGEF1-RP11-366K18.3 ARFGEF1 chr8 68211444 - RP11-366K18.3 chr8 67108960 + Exonic hg19 BRCA TCGA-AN-A0XV-01A 3 2 Out-of-frame Intra-chr q13.2 57742 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARFGEF1-SHC1 ARFGEF1 chr8 68211444 - SHC1 chr1 154942675 - Exonic hg19 SARC TCGA-DX-A7EI-01A 6 13 CDS-5'UTR Inter-chr q13.2 q21.3 Seq+ 57743 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARFGEF1-SORCS2 ARFGEF1 chr8 68255399 - SORCS2 chr4 7398015 + Exonic hg19 SARC TCGA-DX-A48O-01A 7 1 Out-of-frame Inter-chr q13.2 p16.1 Seq+ 57744 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARFGEF2-CNIH2 ARFGEF2 chr20 47558524 - CNIH2 chr11 66049730 + Exonic hg19 BRCA TCGA-BH-A0H6-01A 34 36 In-Frame Inter-chr q13.13 q13.2 Seq+ 57745 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARFGEF2-FAM19A5 ARFGEF2 chr20 47538547 - FAM19A5 chr22 49042409 + Exonic hg19 BRCA TCGA-AR-A0TX-01A 47 12 In-Frame Inter-chr q13.13 q13.32 Seq+ 57746 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARFGEF2-HNF4A ARFGEF2 chr20 47538547 - HNF4A chr20 43034698 + Exonic hg19 SARC TCGA-DX-A1KX-01A 3 1 In-Frame Intra-chr q13.13 q13.12 Tumor suppressor gene Transcription factor Seq+ 57747 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARFGEF2-TSHZ2 ARFGEF2 chr20 47580435 - TSHZ2 chr20 51870038 + Exonic hg19 BRCA TCGA-A8-A09D-01A 5 13 In-Frame Intra-chr q13.13 q13.2 Transcription factor Seq+ 57748 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARFGEF2-TTLL9 ARFGEF2 chr20 47634087 - TTLL9 chr20 30510766 + Exonic hg19 SARC TCGA-X6-A7W8-01A 5 7 In-Frame Intra-chr q13.13 q11.21 Seq+ 57749 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARFIP1-FGB ARFIP1 chr4 153750878 - FGB chr4 155486960 + Exonic hg19 BRCA TCGA-D8-A13Z-01A 13 8 In-Frame Intra-chr q31.3 q31.3 Seq+ 57750 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARGLU1-CXCR4 ARGLU1 chr13 107219921 - CXCR4 chr2 136873482 - Exonic hg19 PRAD TCGA-KK-A59X-01A 4 3 Out-of-frame Inter-chr q33.3 q22.1 Seq+ 57751 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP1-CKAP5 ARHGAP1 chr11 46709723 - CKAP5 chr11 46792532 - Exonic hg19 STAD TCGA-BR-A452-01A 2 11 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 57752 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP10-EDNRA ARHGAP10 chr4 148887990 - EDNRA chr4 148441003 + Exonic hg19 SARC TCGA-DX-A3LS-01A 4 5 In-Frame Intra-chr q31.23 q31.22 Seq+ 57753 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP10-FBXW2 ARHGAP10 chr4 148993926 - FBXW2 chr9 123550464 - Exonic hg19 PRAD TCGA-KK-A8IG-01A 2 1 Out-of-frame Inter-chr q31.23 q33.2 57754 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP10-TMEM184C ARHGAP10 chr4 148653606 - TMEM184C chr4 148593018 + Exonic hg19 BRCA TCGA-A8-A08J-01A 4 6 Out-of-frame Intra-chr q31.23 q31.23 57755 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP10-TMEM184C ARHGAP10 chr4 148803083 - TMEM184C chr4 148593018 + Exonic hg19 BLCA TCGA-FD-A3B8-01A 5 5 Out-of-frame Intra-chr q31.23 q31.23 57756 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP10-TMEM184C ARHGAP10 chr4 148653606 - TMEM184C chr4 148544985 + Exonic hg19 UCS TCGA-NA-A4R1-01A 5 2 Out-of-frame Intra-chr q31.23 q31.23 57757 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP12-KIF5B ARHGAP12 chr10 32197100 - KIF5B chr10 32300444 - Exonic hg19 STAD TCGA-BR-4357-01A 9 8 CDS-3'UTR Intra-chr p11.22 p11.22 Seq+ 57758 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP12-KIF5B ARHGAP12 chr10 32217611 - KIF5B chr10 32306287 - Exonic hg19 STAD TCGA-VQ-AA6B-01A 2 18 5'UTR-CDS Intra-chr p11.22 p11.22 Seq+ 57759 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP12-PPPDE2 ARHGAP12 chr10 32197100 - PPPDE2 chr22 42003865 - Exonic hg19 BRCA TCGA-E2-A105-01A 5 8 Out-of-frame Inter-chr p11.22 57760 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP12-SORCS3 ARHGAP12 chr10 32197100 - SORCS3 chr10 106916896 + Exonic hg19 HNSC TCGA-CN-4727-01A 2 1 In-Frame Intra-chr p11.22 q25.1 57761 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP12-SVIL ARHGAP12 chr10 32115232 - SVIL chr10 29975580 - Exonic hg19 PRAD TCGA-YL-A8SA-01A 2 1 CDS-5'UTR Intra-chr p11.22 p11.23 Seq+ 57762 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP15-KYNU ARHGAP15 chr2 144008169 - KYNU chr2 143742653 + Exonic hg19 LUAD TCGA-38-4630-01A 4 7 In-Frame Intra-chr q22.2 q22.2 Seq+ 57763 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP15-KYNU ARHGAP15 chr2 143887035 - KYNU chr2 143642918 + Exonic hg19 LUSC TCGA-NC-A5HJ-01A 7 13 5'UTR-5'UTR Intra-chr q22.2 q22.2 Seq+ 57764 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP17-RAB8B ARHGAP17 chr16 25026530 - RAB8B chr15 63536955 + Exonic hg19 LIHC TCGA-BC-A10R-01A 3 5 Out-of-frame Inter-chr p12.1 q22.2 57765 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP17-TNRC6A ARHGAP17 chr16 24953308 - TNRC6A chr16 24762047 + Exonic hg19 BRCA TCGA-S3-AA0Z-01A 3 3 In-Frame Intra-chr p12.1 p12.1 57766 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP18-C6orf191 ARHGAP18 chr6 130031169 - C6orf191 chr6 130182389 - Exonic hg19 STAD TCGA-BR-4370-01A 16 12 Out-of-frame Intra-chr q22.33 57767 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP18-C6orf204 ARHGAP18 chr6 130031169 - C6orf204 chr6 118985684 - Exonic hg19 BRCA TCGA-E9-A248-01A 3 3 Out-of-frame Intra-chr q22.33 57768 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP18-THEMIS ARHGAP18 chr6 130031169 - THEMIS chr6 128222226 - Exonic hg19 PRAD TCGA-EJ-A65J-01A 11 9 CDS-5'UTR Intra-chr q22.33 Seq+ 57769 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP19-CYB5A ARHGAP19 chr10 99052329 - CYB5A chr18 71930712 - Exonic hg19 LIHC TCGA-DD-A115-01A 17 42 Out-of-frame Inter-chr q24.1 q22.3 Tumor suppressor gene Seq+ 57770 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP19-RRP12 ARHGAP19 chr10 98994974 - RRP12 chr10 99153517 - Exonic hg19 THCA TCGA-DJ-A3VM-01A 11 4 In-Frame Intra-chr q24.1 q24.1 Seq+ 57771 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP19-RRP12 ARHGAP19 chr10 99016075 - RRP12 chr10 99126889 - Exonic hg19 LIHC TCGA-EP-A2KA-01A 13 8 In-Frame Intra-chr q24.1 q24.1 Seq+ 57772 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP21-ASPHD2 ARHGAP21 chr10 24883879 - ASPHD2 chr22 26838425 + Exonic hg19 BRCA TCGA-BH-A0B7-01A 2 2 Out-of-frame Inter-chr p12.1 q12.1 Seq+ 57773 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP21-ENKUR ARHGAP21 chr10 24955914 - ENKUR chr10 25284798 - Exonic hg19 GBM TCGA-06-5415-01A 2 4 In-Frame Intra-chr p12.1 p12.1 Seq+ 57774 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP21-MSRB2 ARHGAP21 chr10 25010766 - MSRB2 chr10 23399171 + Exonic hg19 STAD TCGA-R5-A7O7-01A 2 15 In-Frame Intra-chr p12.1 p12.2 Seq+ 57775 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP21-PDCD11 ARHGAP21 chr10 25010766 - PDCD11 chr10 105184741 + Exonic hg19 PRAD TCGA-KC-A7F6-01A 4 4 In-Frame Intra-chr p12.1 q24.33 Seq+ 57776 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP21-THNSL1 ARHGAP21 chr10 25010766 - THNSL1 chr10 25310671 + Exonic hg19 UCEC TCGA-BK-A139-02A 2 4 CDS-5'UTR Intra-chr p12.1 p12.1 Seq+ 57777 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP23-ACCN1 ARHGAP23 chr17 36636124 - ACCN1 chr17 31351032 - Exonic hg19 BRCA TCGA-AR-A0TX-01A 18 30 Out-of-frame Intra-chr q12 57778 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP23-CCL18 ARHGAP23 chr17 36623572 - CCL18 chr17 34397807 + Exonic hg19 LGG TCGA-TQ-A7RP-01A 4 2 In-Frame Intra-chr q12 q12 Seq+ 57779 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP23-CCR7 ARHGAP23 chr17 36584792 - CCR7 chr17 38715194 - Exonic hg19 READ TCGA-EI-6509-01A 7 4 Out-of-frame Intra-chr q12 q21.2 Seq+ 57780 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP23-STARD3 ARHGAP23 chr17 36614507 - STARD3 chr17 37809734 + Exonic hg19 READ TCGA-EI-6509-01A 9 6 CDS-5'UTR Intra-chr q12 q12 Seq+ 57781 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP23-TEX14 ARHGAP23 chr17 36642381 - TEX14 chr17 56707915 - Exonic hg19 BRCA TCGA-EW-A1J1-01A 6 4 In-Frame Intra-chr q12 q22 Seq+ 57782 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP23-ZSCAN2 ARHGAP23 chr17 36617176 - ZSCAN2 chr15 85159540 + Exonic hg19 PRAD TCGA-G9-A9S0-01A 6 3 In-Frame Inter-chr q12 q25.2 Transcription factor Seq+ 57783 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP24-C4orf14 ARHGAP24 chr4 86643125 - C4orf14 chr4 57840188 - Exonic hg19 BRCA TCGA-E2-A1IO-01A 5 3 Out-of-frame Intra-chr q21.23 57784 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP24-MAPK10 ARHGAP24 chr4 86700118 - MAPK10 chr4 87115560 - Exonic hg19 PRAD TCGA-KK-A6E0-01A 2 1 5'UTR-5'UTR Intra-chr q21.23 q21.3 Tumor suppressor gene Seq+ 57785 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP24-MAPK10 ARHGAP24 chr4 86863426 - MAPK10 chr4 86938528 - Exonic hg19 SARC TCGA-SI-AA8C-01A 14 14 Out-of-frame Intra-chr q21.23 q21.3 Tumor suppressor gene Seq+ 57786 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP27-KIAA1267 ARHGAP27 chr17 43502930 - KIAA1267 chr17 44111651 - Exonic hg19 STAD TCGA-BR-4357-01A 7 4 Out-of-frame Intra-chr 57787 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP29-DNAJC6 ARHGAP29 chr1 94696963 - DNAJC6 chr1 65830318 + Exonic hg19 PRAD TCGA-EJ-5519-01A 18 12 In-Frame Intra-chr p22.1 Tumor suppressor gene p31.3 Seq+ 57788 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP29-MID2 ARHGAP29 chr1 94702971 - MID2 chrX 107147188 + Exonic hg19 BLCA TCGA-GV-A3QH-01A 3 4 5'UTR-CDS Inter-chr p22.1 Tumor suppressor gene q22.3 Seq+ 57789 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP31-CCDC37 ARHGAP31 chr3 119013851 - CCDC37 chr3 126126015 + Exonic hg19 SARC TCGA-SI-A71Q-01A 20 7 In-Frame Intra-chr q13.32 Seq+ 57790 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP32-AHNAK ARHGAP32 chr11 128993341 - AHNAK chr11 62201363 - Exonic hg19 BRCA TCGA-A8-A06Z-01A 21 8 Out-of-frame Intra-chr q24.3 q12.3 Tumor suppressor gene Seq+ 57791 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP32-C20orf24 ARHGAP32 chr11 128932175 - C20orf24 chr20 35236118 + Exonic hg19 BRCA TCGA-EW-A2FW-01A 51 22 In-Frame Inter-chr q24.3 q11.23 Seq+ 57792 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP32-CWF19L2 ARHGAP32 chr11 128932175 - CWF19L2 chr11 107326502 - Exonic hg19 PRAD TCGA-KK-A8II-01A 7 4 In-Frame Intra-chr q24.3 q22.3 Seq+ 57793 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP32-FCHSD2 ARHGAP32 chr11 129034214 - FCHSD2 chr11 72794785 - Exonic hg19 BRCA TCGA-AO-A0J5-01A 9 8 Out-of-frame Intra-chr q24.3 q13.4 Seq+ 57794 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP32-PRDM10 ARHGAP32 chr11 128963516 - PRDM10 chr11 129782120 - Exonic hg19 PRAD TCGA-YL-A8SK-01B 3 3 In-Frame Intra-chr q24.3 q24.3 Transcription factor Seq+ 57795 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP35-COL22A1 ARHGAP35 chr19 47440665 - COL22A1 chr8 139793223 - Exonic hg19 BRCA TCGA-D8-A1XZ-01A 103 30 Out-of-frame Inter-chr q13.32 Transcription factor q24.3 Seq+ 57796 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP35-PGPEP1L ARHGAP35 chr19 47440665 - PGPEP1L chr15 99514387 - Exonic hg19 PCPG TCGA-QT-A5XO-01A 19 15 Out-of-frame Inter-chr q13.32 Transcription factor q26.3 Seq+ 57797 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP35-SLC1A5 ARHGAP35 chr19 47492932 - SLC1A5 chr19 47282165 - Exonic hg19 CHOL TCGA-YR-A95A-01A 7 5 Out-of-frame Intra-chr q13.32 Transcription factor q13.32 Seq+ 57798 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP39-ZNF16 ARHGAP39 chr8 145770633 - ZNF16 chr8 146157976 - Exonic hg19 STAD TCGA-BR-7716-01A 2 13 In-Frame Intra-chr q24.3 q24.3 Transcription factor Seq+ 57799 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP39-ZNF34 ARHGAP39 chr8 145830920 - ZNF34 chr8 146003910 - Exonic hg19 UCS TCGA-N8-A4PP-01A 4 3 Out-of-frame Intra-chr q24.3 q24.3 Transcription factor 57800 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP42-KMO ARHGAP42 chr11 100730356 - KMO chr1 241749981 + Exonic hg19 LIHC TCGA-BC-A8YO-01A 8 24 In-Frame Inter-chr q22.1 q43 Seq+ 57801 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP42-PGR ARHGAP42 chr11 100558563 - PGR chr11 100933483 - Exonic hg19 BRCA TCGA-A1-A0SJ-01A 2 9 In-Frame Intra-chr q22.1 q22.1 Tumor suppressor gene Transcription factor Seq+ 57802 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP42-SBF2 ARHGAP42 chr11 100558563 - SBF2 chr11 9812230 - Exonic hg19 LUSC TCGA-94-8491-01A 3 1 In-Frame Intra-chr q22.1 p15.4 Seq+ 57803 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP44-C17orf78 ARHGAP44 chr17 12862214 - C17orf78 chr17 35736075 + Exonic hg19 PRAD TCGA-V1-A8ML-01A 9 5 Out-of-frame Intra-chr p12 Seq+ 57804 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP44-DNAH2 ARHGAP44 chr17 12693208 - DNAH2 chr17 7704896 + Exonic hg19 BRCA TCGA-A2-A0CT-01A 6 4 In-Frame Intra-chr p12 p13.1 Seq+ 57805 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP44-SHMT1 ARHGAP44 chr17 12799828 - SHMT1 chr17 18259314 - Exonic hg19 SARC TCGA-DX-A1KY-01A 3 2 CDS-5'UTR Intra-chr p12 p11.2 Seq+ 57806 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP44-SLC13A5 ARHGAP44 chr17 12693208 - SLC13A5 chr17 6610097 - Exonic hg19 LUSC TCGA-85-A4CN-01A 3 1 Out-of-frame Intra-chr p12 p13.1 57807 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP44-ZSWIM7 ARHGAP44 chr17 12832363 - ZSWIM7 chr17 15884458 - Exonic hg19 SARC TCGA-KD-A5QT-01A 33 20 In-Frame Intra-chr p12 p12 Seq+ 57808 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP5-C18orf10 ARHGAP5 chr14 32546641 - C18orf10 chr18 34387897 - Exonic hg19 LUAD TCGA-50-6673-01A 4 4 Out-of-frame Inter-chr q12 57809 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP5-L2HGDH ARHGAP5 chr14 32563592 - L2HGDH chr14 50760964 - Exonic hg19 PAAD TCGA-IB-7646-01A 3 3 In-Frame Intra-chr q12 q21.3 Seq+ 57810 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP5-LSAMP ARHGAP5 chr14 32546641 - LSAMP chr3 116163802 - Exonic hg19 SKCM TCGA-GF-A6C9-06A 21 12 Out-of-frame Inter-chr q12 q13.31 Tumor suppressor gene Seq+ 57811 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP5-NPAS3 ARHGAP5 chr14 32563592 - NPAS3 chr14 33836392 + Exonic hg19 STAD TCGA-BR-8373-01A 5 30 Out-of-frame Intra-chr q12 q13.1 Transcription factor Seq+ 57812 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP5-NUBPL ARHGAP5 chr14 32586493 - NUBPL chr14 32142561 + Exonic hg19 LUSC TCGA-66-2795-01A 5 11 In-Frame Intra-chr q12 q12 Seq+ 57813 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGAP6-KDM6A ARHGAP6 chrX 11445668 - KDM6A chrX 44922667 + Exonic hg19 PRAD TCGA-EJ-8469-01A 10 6 5'UTR-CDS Intra-chr p22.2 p11.3 Oncogene Tumor suppressor gene Seq+ 57814 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGDIA-ACVRL1 ARHGDIA chr17 79825598 - ACVRL1 chr12 52306155 + Exonic hg19 SARC TCGA-DX-A3LY-01B 2 4 Out-of-frame Inter-chr q25.3 q13.13 Oncogene 57815 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGDIA-ERBB3 ARHGDIA chr17 79825598 - ERBB3 chr12 56492035 + Exonic hg19 HNSC TCGA-BA-5555-01A 2 11 Out-of-frame Inter-chr q25.3 q13.2 Oncogene 57816 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGDIA-RNF213 ARHGDIA chr17 79825598 - RNF213 chr17 78261614 + Exonic hg19 LUAD TCGA-55-6983-01A 2 1 3'UTR-CDS Intra-chr q25.3 q25.3 Oncogene 57817 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGDIA-SQSTM1 ARHGDIA chr17 79825598 - SQSTM1 chr5 179250858 + Exonic hg19 HNSC TCGA-CR-7398-01A 2 1 3'UTR-CDS Inter-chr q25.3 q35.3 57818 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGDIA-SQSTM1 ARHGDIA chr17 79825598 - SQSTM1 chr5 179250858 + Exonic hg19 SKCM TCGA-EB-A1NK-01A 3 2 3'UTR-CDS Inter-chr q25.3 q35.3 57819 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGDIB-RP11-677C1.2 ARHGDIB chr12 15103466 - RP11-677C1.2 chr12 29639819 + Exonic hg19 BRCA TCGA-E2-A1LL-01A 16 5 Out-of-frame Intra-chr p12.3 57820 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF1-SNRNP70 ARHGEF1 chr19 42399559 - SNRNP70 chr19 49604647 + Exonic hg19 CESC TCGA-UC-A7PG-01A 21 25 Out-of-frame Intra-chr q13.2 q13.33 Seq+ 57821 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF1-SNRNP70 ARHGEF1 chr19 42399559 - SNRNP70 chr19 49604647 + Exonic hg19 CESC TCGA-UC-A7PG-06A 36 26 Out-of-frame Intra-chr q13.2 q13.33 Seq+ 57822 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF1-UCKL1 ARHGEF1 chr19 42400555 - UCKL1 chr20 62572561 - Exonic hg19 COAD TCGA-D5-6529-01A 3 1 In-Frame Inter-chr q13.2 q13.33 Seq+ 57823 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF1-UCKL1 ARHGEF1 chr19 42400555 - UCKL1 chr20 62572561 - Exonic hg19 READ TCGA-G5-6572-01A 4 6 In-Frame Inter-chr q13.2 q13.33 Seq+ 57824 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF10-C6orf103 ARHGEF10 chr8 1791602 - C6orf103 chr6 147022077 + Exonic hg19 MESO TCGA-3H-AB3S-01A 10 7 Out-of-frame Inter-chr 57825 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF10-RALYL ARHGEF10 chr8 1857636 - RALYL chr8 85686814 + Exonic hg19 UCS TCGA-N5-A59E-01A 2 1 In-Frame Intra-chr q21.2 57826 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF10L-CSDE1 ARHGEF10L chr1 18014242 - CSDE1 chr1 115292828 - Exonic hg19 BRCA TCGA-B6-A402-01A 6 6 CDS-5'UTR Intra-chr p36.13 p13.2 Seq+ 57827 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF10L-EYA2 ARHGEF10L chr1 17914974 - EYA2 chr20 45618640 + Exonic hg19 UCEC TCGA-AX-A2H4-01A 7 2 CDS-5'UTR Inter-chr p36.13 q13.12 57828 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF10L-PADI4 ARHGEF10L chr1 17866445 - PADI4 chr1 17681028 + Exonic hg19 LUSC TCGA-66-2756-01A 2 7 5'UTR-CDS Intra-chr p36.13 Seq+ 57829 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF10L-PADI4 ARHGEF10L chr1 17991090 - PADI4 chr1 17657464 + Exonic hg19 LUAD TCGA-91-8499-01A 9 4 Out-of-frame Intra-chr p36.13 Seq+ 57830 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF10L-PADI4 ARHGEF10L chr1 17983203 - PADI4 chr1 17657464 + Exonic hg19 BRCA TCGA-B6-A3ZX-01A 14 10 Out-of-frame Intra-chr p36.13 Seq+ 57831 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF10L-PADI4 ARHGEF10L chr1 18021775 - PADI4 chr1 17668438 + Exonic hg19 BLCA TCGA-DK-AA6P-01A 20 17 In-Frame Intra-chr p36.13 Seq+ 57832 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF10L-PADI4 ARHGEF10L chr1 17965184 - PADI4 chr1 17664533 + Exonic hg19 LGG TCGA-VM-A8CD-01A 19 3 Out-of-frame Intra-chr p36.13 Seq+ 57833 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF10L-PAK4 ARHGEF10L chr1 17991090 - PAK4 chr19 39660172 + Exonic hg19 STAD TCGA-CG-4449-01A 9 6 CDS-5'UTR Inter-chr p36.13 q13.2 STE:STE20 Seq+ 57834 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF11-ALDH9A1 ARHGEF11 chr1 157014091 - ALDH9A1 chr1 165664634 - Exonic hg19 BRCA TCGA-BH-A8FY-01A 13 6 Out-of-frame Intra-chr q23.1 q24.1 Seq+ 57835 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF11-CD48 ARHGEF11 chr1 157014091 - CD48 chr1 160654979 - Exonic hg19 SARC TCGA-DX-A1L2-01A 49 26 Out-of-frame Intra-chr q23.1 q23.3 Seq+ 57836 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF11-ETV3 ARHGEF11 chr1 157014091 - ETV3 chr1 157106157 - Exonic hg19 BRCA TCGA-BH-A18T-01A 23 9 CDS-5'UTR Intra-chr q23.1 q23.1 Transcription factor Seq+ 57837 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF11-ETV3 ARHGEF11 chr1 157014091 - ETV3 chr1 157095771 - Exonic hg19 BRCA TCGA-D8-A1JF-01A 6 2 Out-of-frame Intra-chr q23.1 q23.1 Transcription factor Seq+ 57838 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF11-PLEKHA6 ARHGEF11 chr1 157014091 - PLEKHA6 chr1 204243937 - Exonic hg19 SKCM TCGA-EE-A182-06A 23 13 CDS-5'UTR Intra-chr q23.1 q32.1 Seq+ 57839 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF11-SHC1 ARHGEF11 chr1 157014091 - SHC1 chr1 154942675 - Exonic hg19 SARC TCGA-DX-AB2V-01A 2 4 CDS-5'UTR Intra-chr q23.1 q21.3 Seq+ 57840 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF11-SMCP ARHGEF11 chr1 157014091 - SMCP chr1 152856879 + Exonic hg19 LUSC TCGA-43-2576-01A 5 5 CDS-5'UTR Intra-chr q23.1 q21.3 Seq+ 57841 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF12-CEP164 ARHGEF12 chr11 120207984 - CEP164 chr11 117209282 + Exonic hg19 SARC TCGA-QQ-A5VA-01A 29 11 CDS-5'UTR Intra-chr q23.3 Tumor suppressor gene q23.3 Seq+ 57842 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF12-CNTN5 ARHGEF12 chr11 120280159 - CNTN5 chr11 99786786 + Exonic hg19 LUAD TCGA-55-6642-01A 4 2 In-Frame Intra-chr q23.3 Tumor suppressor gene q22.1 Seq+ 57843 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF12-OAF ARHGEF12 chr11 120207984 - OAF chr11 120096370 + Exonic hg19 PCPG TCGA-QR-A6GR-01A 6 2 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Seq+ 57844 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF12-POU2F3 ARHGEF12 chr11 120207984 - POU2F3 chr11 120139919 + Exonic hg19 STAD TCGA-BR-A452-01A 7 47 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene Transcription factor Seq+ 57845 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF12-POU2F3 ARHGEF12 chr11 120207984 - POU2F3 chr11 120186070 + Exonic hg19 STAD TCGA-CG-4438-01A 11 5 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene Transcription factor Seq+ 57846 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF12-SIK3 ARHGEF12 chr11 120207984 - SIK3 chr11 116827780 - Exonic hg19 BRCA TCGA-A8-A09G-01A 25 39 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Seq+ 57847 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF16-ITK ARHGEF16 chr1 3371375 - ITK chr5 156670633 + Exonic hg19 PAAD TCGA-3A-A9IH-01A 2 1 5'UTR-CDS Inter-chr p36.32 q33.3 TK:Tec 57848 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF17-C11orf67 ARHGEF17 chr11 73022875 - C11orf67 chr11 77553525 + Exonic hg19 SARC TCGA-X6-A7WC-01A 8 16 CDS-5'UTR Intra-chr q13.4 Seq+ 57849 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF17-EP300 ARHGEF17 chr11 73022875 - EP300 chr22 41545042 + Exonic hg19 BRCA TCGA-BH-A0AU-01A 22 4 In-Frame Inter-chr q13.4 q13.2 Oncogene Seq+ 57850 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF17-P2RY2 ARHGEF17 chr11 73022875 - P2RY2 chr11 72945201 + Exonic hg19 HNSC TCGA-CN-A498-01A 3 1 CDS-5'UTR Intra-chr q13.4 q13.4 57851 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF17-WDR74 ARHGEF17 chr11 73022875 - WDR74 chr11 62607339 - Exonic hg19 BRCA TCGA-GM-A2DF-01A 4 1 Out-of-frame Intra-chr q13.4 q12.3 57852 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF18-ACACB ARHGEF18 chr19 7460133 - ACACB chr12 109634813 + Exonic hg19 SARC TCGA-3B-A9HS-01A 478 284 5'UTR-3'UTR Inter-chr p13.2 q24.11 Seq+ 57853 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF18-C11orf67 ARHGEF18 chr19 7518601 - C11orf67 chr11 77629107 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 11 46 Out-of-frame Inter-chr p13.2 57854 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF18-MAPKAP1 ARHGEF18 chr19 7506938 - MAPKAP1 chr9 128230388 - Exonic hg19 COAD TCGA-AD-6901-01A 10 4 In-Frame Inter-chr p13.2 q33.3 Seq+ 57855 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF18-MYO9B ARHGEF18 chr19 7512054 - MYO9B chr19 17256207 + Exonic hg19 BRCA TCGA-E9-A1NG-01A 8 8 In-Frame Intra-chr p13.2 p13.11 Seq+ 57856 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF18-TECR ARHGEF18 chr19 7535201 - TECR chr19 14673337 + Exonic hg19 LUSC TCGA-56-7221-01A 4 15 3'UTR-CDS Intra-chr p13.2 p13.12 Seq+ 57857 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF19-ANO7L1 ARHGEF19 chr1 16533443 - ANO7L1 chr1 16542556 - Exonic hg19 BRCA TCGA-A2-A04P-01A 8 5 Out-of-frame Intra-chr p36.13 p36.13 Seq+ 57858 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF2-CCT3 ARHGEF2 chr1 155924693 - CCT3 chr1 156305679 - Exonic hg19 STAD TCGA-R5-A7ZE-01B 7 11 In-Frame Intra-chr q22 q22 Seq+ 57859 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF2-EIF2C3 ARHGEF2 chr1 155927504 - EIF2C3 chr1 36432556 + Exonic hg19 KIRC TCGA-CW-6097-01A 6 2 In-Frame Intra-chr q22 57860 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF2-PAQR6 ARHGEF2 chr1 155935094 - PAQR6 chr1 156214194 - Exonic hg19 UCEC TCGA-5B-A90C-01A 144 64 In-Frame Intra-chr q22 q22 Seq+ 57861 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF2-S100A7 ARHGEF2 chr1 155948156 - S100A7 chr1 153431506 - Exonic hg19 BLCA TCGA-K4-A5RH-01A 419 267 CDS-5'UTR Intra-chr q22 q21.3 Seq+ 57862 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF2-SMG5 ARHGEF2 chr1 155948156 - SMG5 chr1 156244477 - Exonic hg19 HNSC TCGA-CV-6941-01A 6 2 Out-of-frame Intra-chr q22 q22 Seq+ 57863 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF2-SSR2 ARHGEF2 chr1 155932724 - SSR2 chr1 155981678 - Exonic hg19 BRCA TCGA-AR-A256-01A 51 27 In-Frame Intra-chr q22 q22 Seq+ 57864 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF2-SSR2 ARHGEF2 chr1 155921274 - SSR2 chr1 155979441 - Exonic hg19 UCS TCGA-N6-A4VC-01A 152 81 In-Frame Intra-chr q22 q22 Seq+ 57865 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF25-CPNE8 ARHGEF25 chr12 58008183 - CPNE8 chr12 39047872 - Exonic hg19 SARC TCGA-DX-AB2H-01A 92 84 In-Frame Intra-chr q13.3 q12 Seq+ 57866 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF26-LANCL1 ARHGEF26 chr3 153943799 - LANCL1 chr2 211341136 - Exonic hg19 PRAD TCGA-EJ-7115-01A 4 1 CDS-5'UTR Inter-chr q34 57867 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF3-ACP6 ARHGEF3 chr3 56916320 - ACP6 chr1 147131890 - Exonic hg19 BRCA TCGA-AO-A0J6-01A 27 10 In-Frame Inter-chr p14.3 q21.2 Seq+ 57868 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF3-ANO10 ARHGEF3 chr3 56807737 - ANO10 chr3 43474219 - Exonic hg19 LUAD TCGA-35-4123-01A 50 25 In-Frame Intra-chr p14.3 p21.33 Seq+ 57869 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF3-ARF4 ARHGEF3 chr3 56916320 - ARF4 chr3 57558025 - Exonic hg19 PAAD TCGA-HZ-8637-01A 44 26 In-Frame Intra-chr p14.3 p14.3 Seq+ 57870 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF3-CTNND2 ARHGEF3 chr3 57069116 - CTNND2 chr5 11732384 - Exonic hg19 STAD TCGA-R5-A7O7-01A 4 6 Out-of-frame Inter-chr p14.3 p15.2 Seq+ 57871 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF3-FDFT1 ARHGEF3 chr3 56761449 - FDFT1 chr8 11653082 + Exonic hg19 PRAD TCGA-CH-5761-01A 2 1 Out-of-frame Inter-chr p14.3 p23.1 57872 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF3-HESX1 ARHGEF3 chr3 57110774 - HESX1 chr3 57234056 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 6 1 Out-of-frame Intra-chr p14.3 p14.3 Transcription factor 57873 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF3-LTF ARHGEF3 chr3 56835731 - LTF chr3 46509809 - Exonic hg19 BRCA TCGA-5L-AAT0-01A 15 31 CDS-5'UTR Intra-chr p14.3 p21.31 Oncogene Tumor suppressor gene Transcription factor Seq+ 57874 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF3-RHAG ARHGEF3 chr3 56916320 - RHAG chr6 49587075 - Exonic hg19 LUAD TCGA-86-7953-01A 39 36 Out-of-frame Inter-chr p14.3 p12.3 Seq+ 57875 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF38-ZNF622 ARHGEF38 chr4 106474118 - ZNF622 chr5 16463851 - Exonic hg19 PRAD TCGA-YL-A9WL-01A 47 7 In-Frame Inter-chr q24 p15.1 Seq+ 57876 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF6-TMEM48 ARHGEF6 chrX 135814261 - TMEM48 chr1 54275419 - Exonic hg19 SARC TCGA-X6-A8C2-01A 4 4 Out-of-frame Inter-chr q26.3 57877 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF7-ATP11A ARHGEF7 chr13 111920017 - ATP11A chr13 113459271 + Exonic hg19 LUAD TCGA-O1-A52J-01A 2 2 Out-of-frame Intra-chr q34 q34 Seq+ 57878 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF7-EXOC4 ARHGEF7 chr13 111768038 - EXOC4 chr7 133580352 + Exonic hg19 SARC TCGA-DX-A23R-01A 8 9 In-Frame Inter-chr q34 q33 Seq+ 57879 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF7-KLF10 ARHGEF7 chr13 111896641 - KLF10 chr8 103664625 - Exonic hg19 BLCA TCGA-FD-A3SJ-01A 8 2 Out-of-frame Inter-chr q34 q22.3 Tumor suppressor gene Transcription factor Seq+ 57880 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF7-PKIB ARHGEF7 chr13 111806338 - PKIB chr6 123038932 + Exonic hg19 LGG TCGA-TM-A7CA-01A 2 1 5'UTR-5'UTR Inter-chr q34 q22.31 Seq+ 57881 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF7-PTEN ARHGEF7 chr13 111896641 - PTEN chr10 89685270 + Exonic hg19 PRAD TCGA-EJ-5510-01A 8 3 In-Frame Inter-chr q34 q23.31 Oncogene Tumor suppressor gene Seq+ 57882 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARHGEF7-SPATA7 ARHGEF7 chr13 111940790 - SPATA7 chr14 88883055 + Exonic hg19 SARC TCGA-SI-A71O-06A 7 10 In-Frame Inter-chr q34 q31.3 Seq+ 57883 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID1A-BEND5 ARID1A chr1 27024031 - BEND5 chr1 49202124 - Exonic hg19 GBM TCGA-28-2514-01A 5 22 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p33 Seq+ 57884 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID1A-DHDDS ARID1A chr1 27059283 - DHDDS chr1 26764659 + Exonic hg19 BRCA TCGA-A7-A13D-01B 2 1 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 Seq+ 57885 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID1A-NIPBL ARID1A chr1 27102198 - NIPBL chr5 36995724 + Exonic hg19 LUSC TCGA-18-4083-01A 11 3 Out-of-frame Inter-chr p36.11 Oncogene Tumor suppressor gene p13.2 Seq+ 57886 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID1A-PRKCZ ARID1A chr1 27088810 - PRKCZ chr1 2066701 + Exonic hg19 LIHC TCGA-DD-A11D-01A 18 14 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p36.33 Seq+ 57887 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID1A-RNF31 ARID1A chr1 27094490 - RNF31 chr14 24624366 + Exonic hg19 GBM TCGA-06-0125-01A 10 36 In-Frame Inter-chr p36.11 Oncogene Tumor suppressor gene q12 Seq+ 57888 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID1A-RNF31 ARID1A chr1 27094490 - RNF31 chr14 24624366 + Exonic hg19 GBM TCGA-06-0125-02A 11 24 In-Frame Inter-chr p36.11 Oncogene Tumor suppressor gene q12 Seq+ 57889 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID1A-RPS6KA1 ARID1A chr1 27102198 - RPS6KA1 chr1 26897940 + Exonic hg19 STAD TCGA-HU-A4GH-01A 3 108 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene Seq+ 57890 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID1A-SEC11A ARID1A chr1 27094490 - SEC11A chr15 85234875 - Exonic hg19 PRAD TCGA-HC-7821-01A 7 5 In-Frame Inter-chr p36.11 Oncogene Tumor suppressor gene q25.3 Seq+ 57891 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID1A-THBS3 ARID1A chr1 27059283 - THBS3 chr1 155172928 - Exonic hg19 BRCA TCGA-C8-A12V-01A 40 34 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene q22 Seq+ 57892 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID1A-THSD7B ARID1A chr1 27059283 - THSD7B chr2 137639714 + Exonic hg19 LIHC TCGA-FV-A3I0-01A 4 6 Out-of-frame Inter-chr p36.11 Oncogene Tumor suppressor gene q22.1 Seq+ 57893 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID1A-UBE2U ARID1A chr1 27059283 - UBE2U chr1 64686542 + Exonic hg19 STAD TCGA-BR-8679-01A 2 16 Out-of-frame Intra-chr p36.11 Oncogene Tumor suppressor gene p31.3 Seq+ 57894 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID1A-YTHDF2 ARID1A chr1 27059283 - YTHDF2 chr1 29064170 + Exonic hg19 BRCA TCGA-E2-A14T-01A 105 98 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p35.3 Seq+ 57895 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID1B-AL590867.1 ARID1B chr6 157150555 - AL590867.1 chr6 153667581 + Exonic hg19 BRCA TCGA-E9-A248-01A 57 36 Out-of-frame Intra-chr q25.3 Oncogene q25.2 57896 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID1B-C6orf35 ARID1B chr6 157358010 - C6orf35 chr6 157714031 - Exonic hg19 LUAD TCGA-97-8177-01A 16 8 Out-of-frame Intra-chr q25.3 Oncogene 57897 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID1B-ENPP4 ARID1B chr6 157406039 - ENPP4 chr6 46107288 + Exonic hg19 LUSC TCGA-66-2800-01A 32 26 CDS-5'UTR Intra-chr q25.3 Oncogene p21.1 Seq+ 57898 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID1B-EZR ARID1B chr6 157256710 - EZR chr6 159210403 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 57 50 In-Frame Intra-chr q25.3 Oncogene q25.3 Seq+ 57899 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID1B-PARK2 ARID1B chr6 157150555 - PARK2 chr6 162864505 - Exonic hg19 LUAD TCGA-80-5608-01A 14 10 Out-of-frame Intra-chr q25.3 Oncogene Tumor suppressor gene Seq+ 57900 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID1B-PLEKHG1 ARID1B chr6 157256710 - PLEKHG1 chr6 151089774 + Exonic hg19 BRCA TCGA-E9-A248-01A 125 67 In-Frame Intra-chr q25.3 Oncogene q25.1 Seq+ 57901 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID1B-PREP ARID1B chr6 157150555 - PREP chr6 105845802 - Exonic hg19 LGG TCGA-E1-5304-01A 66 26 In-Frame Intra-chr q25.3 Oncogene q21 Seq+ 57902 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID1B-SAMD5 ARID1B chr6 157150555 - SAMD5 chr6 147885530 + Exonic hg19 SKCM TCGA-ER-A197-06A 5 4 In-Frame Intra-chr q25.3 Oncogene q24.3 Seq+ 57903 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID1B-SASH1 ARID1B chr6 157150555 - SASH1 chr6 148711270 + Exonic hg19 SKCM TCGA-ER-A197-06A 2 5 In-Frame Intra-chr q25.3 Oncogene q24.3 Tumor suppressor gene Seq+ 57904 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID1B-SMOC2 ARID1B chr6 157150555 - SMOC2 chr6 169051361 + Exonic hg19 BLCA TCGA-FD-A6TI-01A 6 6 Out-of-frame Intra-chr q25.3 Oncogene q27 Seq+ 57905 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID1B-SNX9 ARID1B chr6 157150555 - SNX9 chr6 158288579 + Exonic hg19 BRCA TCGA-BH-A1F6-01A 37 12 In-Frame Intra-chr q25.3 Oncogene q25.3 Pub Seq+ 57906 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID1B-SYNE1 ARID1B chr6 157406039 - SYNE1 chr6 152464900 - Exonic hg19 OV TCGA-13-0885-01A 2 3 In-Frame Intra-chr q25.3 Oncogene q25.2 Oncogene 57907 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID1B-TIAM2 ARID1B chr6 157100605 - TIAM2 chr6 155411423 + Exonic hg19 GBM TCGA-19-5960-01A 11 48 CDS-5'UTR Intra-chr q25.3 Oncogene q25.2 Seq+ 57908 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID1B-TIAM2 ARID1B chr6 157470085 - TIAM2 chr6 155265250 + Exonic hg19 LUSC TCGA-85-7950-01A 13 12 Out-of-frame Intra-chr q25.3 Oncogene q25.2 Seq+ 57909 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID2-C12orf56 ARID2 chr12 46125097 - C12orf56 chr12 64746836 - Exonic hg19 SKCM TCGA-DA-A95Y-06A 8 4 Out-of-frame Intra-chr q12 Oncogene Tumor suppressor gene Transcription factor q14.2 Seq+ 57910 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID2-PTPRB ARID2 chr12 46125097 - PTPRB chr12 70933802 - Exonic hg19 SARC TCGA-DX-A6BE-01A 10 8 In-Frame Intra-chr q12 Oncogene Tumor suppressor gene Transcription factor q15 Seq+ 57911 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID2-SCAF11 ARID2 chr12 46125097 - SCAF11 chr12 46357971 - Exonic hg19 SKCM TCGA-BF-A1PV-01A 3 3 CDS-5'UTR Intra-chr q12 Oncogene Tumor suppressor gene Transcription factor q12 Seq+ 57912 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID2-SCAF11 ARID2 chr12 46125097 - SCAF11 chr12 46357971 - Exonic hg19 READ TCGA-F5-6464-01A 4 6 CDS-5'UTR Intra-chr q12 Oncogene Tumor suppressor gene Transcription factor q12 Seq+ 57913 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID2-SPATS1 ARID2 chr12 46287504 - SPATS1 chr6 44336116 + Exonic hg19 BLCA TCGA-E7-A7DV-01A 2 1 Out-of-frame Inter-chr q12 Oncogene Tumor suppressor gene Transcription factor p21.1 Seq+ 57914 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID2-SPSB2 ARID2 chr12 46205334 - SPSB2 chr12 6991451 - Exonic hg19 LUSC TCGA-94-7943-01A 3 5 Out-of-frame Intra-chr q12 Oncogene Tumor suppressor gene Transcription factor p13.31 Seq+ 57915 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID2-TMPRSS2 ARID2 chr12 46233279 - TMPRSS2 chr21 42902145 - Exonic hg19 BRCA TCGA-B6-A0RH-01A 36 20 Out-of-frame Inter-chr q12 Oncogene Tumor suppressor gene Transcription factor q22.3 Seq+ 57916 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID2-ZNF641 ARID2 chr12 46125097 - ZNF641 chr12 48741898 - Exonic hg19 BRCA TCGA-AR-A1AV-01A 23 5 In-Frame Intra-chr q12 Oncogene Tumor suppressor gene Transcription factor q13.11 Transcription factor Seq+ 57917 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID3A-MORC2 ARID3A chr19 929896 - MORC2 chr22 31328756 - Exonic hg19 UCEC TCGA-EY-A2ON-01A 223 146 In-Frame Inter-chr p13.3 Transcription factor q12.2 Seq+ 57918 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID3A-PMEPA1 ARID3A chr19 968503 - PMEPA1 chr20 56234753 - Exonic hg19 BRCA TCGA-BH-A0AU-01A 16 8 In-Frame Inter-chr p13.3 Transcription factor q13.31 Seq+ 57919 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID3A-PRPF31 ARID3A chr19 932742 - PRPF31 chr19 54634738 + Exonic hg19 ESCA TCGA-L5-A891-01A 56 271 In-Frame Intra-chr p13.3 Transcription factor Seq+ 57920 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID3B-USP47 ARID3B chr15 74833671 - USP47 chr11 11906014 + Exonic hg19 UCEC TCGA-BK-A26L-01A 3 15 5'UTR-CDS Inter-chr q24.1 Transcription factor p15.3 Seq+ 57921 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID4A-C14orf149 ARID4A chr14 58814596 - C14orf149 chr14 59946069 - Exonic hg19 BLCA TCGA-FD-A3B3-01A 5 2 Out-of-frame Intra-chr q23.1 57922 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID4A-NAA30 ARID4A chr14 58766578 - NAA30 chr14 57863470 + Exonic hg19 LIHC TCGA-BD-A3ER-01A 14 18 In-Frame Intra-chr q23.1 q22.3 Seq+ 57923 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID4A-NPAS3 ARID4A chr14 58766578 - NPAS3 chr14 33836392 + Exonic hg19 LUAD TCGA-78-8660-01A 3 2 Out-of-frame Intra-chr q23.1 q13.1 Transcription factor 57924 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID4B-B3GALNT2 ARID4B chr1 235357328 - B3GALNT2 chr1 235613655 - Exonic hg19 BRCA TCGA-BH-A203-01A 34 8 Out-of-frame Intra-chr q42.3 Seq+ 57925 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID4B-GNPAT ARID4B chr1 235490229 - GNPAT chr1 231398469 + Exonic hg19 OV TCGA-13-1512-01A 2 10 In-Frame Intra-chr q42.3 q42.2 Seq+ 57926 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID4B-IGFN1 ARID4B chr1 235491084 - IGFN1 chr1 201194952 + Exonic hg19 SKCM TCGA-QB-AA9O-06A 32 19 5'UTR-CDS Intra-chr q42.3 q32.1 Seq+ 57927 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID4B-KLHL12 ARID4B chr1 235490229 - KLHL12 chr1 202894335 - Exonic hg19 SARC TCGA-DX-A8BV-01A 6 4 CDS-5'UTR Intra-chr q42.3 q32.1 Seq+ 57928 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID4B-NTPCR ARID4B chr1 235409735 - NTPCR chr1 233113909 + Exonic hg19 BLCA TCGA-G2-A3VY-01A 76 28 Out-of-frame Intra-chr q42.3 q42.2 Seq+ 57929 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID4B-PCNXL2 ARID4B chr1 235420475 - PCNXL2 chr1 233314921 - Exonic hg19 BRCA TCGA-OL-A5D8-01A 77 71 In-Frame Intra-chr q42.3 Seq+ 57930 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID4B-SCCPDH ARID4B chr1 235357328 - SCCPDH chr1 246927548 + Exonic hg19 SKCM TCGA-ER-A197-06A 5 3 Out-of-frame Intra-chr q42.3 q44 Seq+ 57931 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID4B-SOX5 ARID4B chr1 235377084 - SOX5 chr12 24048958 - Exonic hg19 LUSC TCGA-77-A5GH-01A 6 2 In-Frame Inter-chr q42.3 p12.1 Transcription factor Seq+ 57932 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARID5B-ABLIM1 ARID5B chr10 63700167 - ABLIM1 chr10 116201545 - Exonic hg19 BRCA TCGA-AO-A12G-01A 16 24 In-Frame Intra-chr q21.2 Transcription factor q25.3 Seq+ 57933 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARIH1-SENP8 ARIH1 chr15 72847704 - SENP8 chr15 72431918 + Exonic hg19 HNSC TCGA-UF-A7JK-01A 6 6 CDS-5'UTR Intra-chr q24.1 q23 Seq+ 57934 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARIH2-CAMP ARIH2 chr3 48965246 - CAMP chr3 48265844 + Exonic hg19 GBM TCGA-14-2554-01A 39 108 In-Frame Intra-chr p21.31 p21.31 Seq+ 57935 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARIH2-DHX30 ARIH2 chr3 49011249 - DHX30 chr3 47887190 + Exonic hg19 BRCA TCGA-A7-A13D-01B 13 15 In-Frame Intra-chr p21.31 p21.31 Seq+ 57936 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARIH2-RHOA ARIH2 chr3 48960244 - RHOA chr3 49413024 - Exonic hg19 BLCA TCGA-FD-A3B8-01A 11 19 5'UTR-5'UTR Intra-chr p21.31 p21.31 Oncogene Tumor suppressor gene Seq+ 57937 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARIH2-SLC25A20 ARIH2 chr3 48956431 - SLC25A20 chr3 48929505 - Exonic hg19 BRCA TCGA-AC-A23C-01A 21 19 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 57938 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARIH2-TRIO ARIH2 chr3 48956431 - TRIO chr5 14286980 + Exonic hg19 HNSC TCGA-BA-5153-01A 4 4 5'UTR-CDS Inter-chr p21.31 p15.2 Seq+ 57939 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARL1-UBE2N ARL1 chr12 101801420 - UBE2N chr12 93805075 - Exonic hg19 SARC TCGA-DX-A6BF-01A 18 1 3'UTR-CDS Intra-chr q23.2 q22 Seq+ 57940 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARL13B-EPHA6 ARL13B chr3 93722752 - EPHA6 chr3 96728848 + Exonic hg19 BLCA TCGA-XF-AAMX-01A 9 9 Out-of-frame Intra-chr q11.1 q11.2 Seq+ 57941 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARL15-CDC42SE2 ARL15 chr5 53409032 - CDC42SE2 chr5 130721236 + Exonic hg19 BRCA TCGA-C8-A134-01A 2 1 In-Frame Intra-chr q11.2 q31.1 57942 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARL15-ITGA1 ARL15 chr5 53409032 - ITGA1 chr5 52243175 + Exonic hg19 SARC TCGA-HS-A5N8-01A 6 1 In-Frame Intra-chr q11.2 q11.2 Seq+ 57943 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARL15-MOCS2 ARL15 chr5 53606262 - MOCS2 chr5 52404473 - Exonic hg19 LUSC TCGA-21-1079-01A 4 1 In-Frame Intra-chr q11.2 q11.2 Seq+ 57944 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARL15-PARP8 ARL15 chr5 53606262 - PARP8 chr5 50045985 + Exonic hg19 SARC TCGA-DX-A1KX-01A 12 2 Out-of-frame Intra-chr q11.2 q11.1 Seq+ 57945 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARL16-C16orf70 ARL16 chr17 79650566 - C16orf70 chr16 67159862 + Exonic hg19 LUSC TCGA-37-3792-01A 12 11 In-Frame Inter-chr q25.3 q22.1 Seq+ 57946 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARL16-CSNK1D ARL16 chr17 79650566 - CSNK1D chr17 80223672 - Exonic hg19 BLCA TCGA-BL-A0C8-01A 2 1 Out-of-frame Intra-chr q25.3 q25.3 57947 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARL5B-CCDC102B ARL5B chr10 18948612 - CCDC102B chr18 66503986 + Exonic hg19 LGG TCGA-CS-4943-01A 4 2 CDS-5'UTR Inter-chr p12.31 q22.1 Seq+ 57948 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARL5B-NSUN6 ARL5B chr10 18957606 - NSUN6 chr10 18840900 - Exonic hg19 LUSC TCGA-92-8064-01A 18 5 Out-of-frame Intra-chr p12.31 p12.31 Seq+ 57949 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARL8A-UBE2T ARL8A chr1 202113578 - UBE2T chr1 202304186 - Exonic hg19 CESC TCGA-EA-A3Y4-01A 9 2 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 57950 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARL8B-CLASP2 ARL8B chr3 5164273 - CLASP2 chr3 33738425 - Exonic hg19 PCPG TCGA-W2-A7HB-01A 8 14 In-Frame Intra-chr p26.1 p22.3 Seq+ 57951 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARL8B-ITPR1 ARL8B chr3 5164273 - ITPR1 chr3 4887823 + Exonic hg19 CESC TCGA-EA-A50E-01A 45 33 In-Frame Intra-chr p26.1 p26.1 Seq+ 57952 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARL8B-ITPR1 ARL8B chr3 5164273 - ITPR1 chr3 4808214 + Exonic hg19 CESC TCGA-JW-A5VJ-01A 7 1 In-Frame Intra-chr p26.1 p26.1 Seq+ 57953 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARL8B-ITPR1 ARL8B chr3 5164273 - ITPR1 chr3 4808214 + Exonic hg19 BLCA TCGA-K4-A83P-01A 15 12 In-Frame Intra-chr p26.1 p26.1 Seq+ 57954 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARL8B-USP4 ARL8B chr3 5164273 - USP4 chr3 49339975 - Exonic hg19 COAD TCGA-D5-6534-01A 15 15 In-Frame Intra-chr p26.1 p21.31 Seq+ 57955 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARMC1-PEX19 ARMC1 chr8 66525479 - PEX19 chr1 160249635 - Exonic hg19 BRCA TCGA-A7-A4SE-01A 39 10 In-Frame Inter-chr q13.1 q23.2 Seq+ 57956 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARMC1-RB1CC1 ARMC1 chr8 66534498 - RB1CC1 chr8 53547528 - Exonic hg19 BRCA TCGA-C8-A1HN-01A 41 40 Out-of-frame Intra-chr q13.1 q11.23 Tumor suppressor gene Seq+ 57957 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARMC1-RP11-574F21.3 ARMC1 chr8 66525479 - RP11-574F21.3 chr1 160249635 - Exonic hg19 BRCA TCGA-A7-A4SE-01A 9 2 Out-of-frame Inter-chr q13.1 57958 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARMC1-SPAG11B ARMC1 chr8 66525479 - SPAG11B chr8 7308721 - Exonic hg19 LUAD TCGA-91-7771-01A 9 11 Out-of-frame Intra-chr q13.1 p23.1 Seq+ 57959 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARMC1-UBE2W ARMC1 chr8 66525479 - UBE2W chr8 74742707 - Exonic hg19 LUAD TCGA-78-7153-01A 4 2 In-Frame Intra-chr q13.1 q21.11 Seq+ 57960 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARMC2-RTN4IP1 ARMC2 chr6 109197553 - RTN4IP1 chr6 107050797 - Exonic hg19 SARC TCGA-DX-A6Z0-01A 2 1 In-Frame Intra-chr q21 q21 Tumor suppressor gene 57961 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARMC7-CDR2L ARMC7 chr17 73106701 - CDR2L chr17 72995599 + Exonic hg19 STAD TCGA-R5-A7ZE-01B 3 9 In-Frame Intra-chr q25.1 q25.1 Seq+ 57962 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARMC7-HN1 ARMC7 chr17 73106701 - HN1 chr17 73132345 - Exonic hg19 LUSC TCGA-39-5028-01A 20 12 In-Frame Intra-chr q25.1 Seq+ 57963 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARMC8-CACNA2D2 ARMC8 chr3 138007962 - CACNA2D2 chr3 50513630 - Exonic hg19 BLCA TCGA-XF-A9ST-01A 5 3 Out-of-frame Intra-chr q22.3 p21.31 Seq+ 57964 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARMC8-CLDN18 ARMC8 chr3 137906441 - CLDN18 chr3 137742500 + Exonic hg19 LGG TCGA-E1-5303-01A 5 7 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 57965 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARMC8-IFT57 ARMC8 chr3 137993386 - IFT57 chr3 107910490 - Exonic hg19 PRAD TCGA-KK-A6E1-01A 5 4 In-Frame Intra-chr q22.3 q13.13 Seq+ 57966 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARMC8-TF ARMC8 chr3 137906441 - TF chr3 133483026 + Exonic hg19 PRAD TCGA-EJ-5514-01A 4 1 5'UTR-CDS Intra-chr q22.3 q22.1 Seq+ 57967 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARMC9-BLVRB ARMC9 chr2 232063412 - BLVRB chr19 40957399 - Exonic hg19 ACC TCGA-OR-A5JP-01A 143 103 5'UTR-CDS Inter-chr q37.1 q13.2 Seq+ 57968 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARMC9-EVL ARMC9 chr2 232160966 - EVL chr14 100551024 + Exonic hg19 LUAD TCGA-67-3771-01A 4 1 Out-of-frame Inter-chr q37.1 q32.2 Seq+ 57969 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARMC9-PARD3B ARMC9 chr2 232104754 - PARD3B chr2 206305094 + Exonic hg19 SARC TCGA-DX-A1KY-01A 12 12 Out-of-frame Intra-chr q37.1 q33.3 Seq+ 57970 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARMC9-PSMD1 ARMC9 chr2 232079714 - PSMD1 chr2 232035280 + Exonic hg19 LUAD TCGA-49-AARQ-01A 116 69 In-Frame Intra-chr q37.1 q37.1 Seq+ 57971 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARMC9-SSR2 ARMC9 chr2 232160966 - SSR2 chr1 155988159 - Exonic hg19 PCPG TCGA-WB-A81J-01A 6 14 Out-of-frame Inter-chr q37.1 q22 Seq+ 57972 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARNT-F5 ARNT chr1 150825238 - F5 chr1 169494146 - Exonic hg19 LUAD TCGA-78-7146-01A 6 8 Out-of-frame Intra-chr q21.3 Oncogene Transcription factor q24.2 Seq+ 57973 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARNT-RIIAD1 ARNT chr1 150849019 - RIIAD1 chr1 151685945 + Exonic hg19 LUAD TCGA-86-8673-01A 20 65 CDS-5'UTR Intra-chr q21.3 Oncogene Transcription factor q21.3 Seq+ 57974 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARNT-RP11-126K1.2 ARNT chr1 150807014 - RP11-126K1.2 chr1 151252734 - Exonic hg19 PRAD TCGA-J9-A8CL-01A 4 7 Out-of-frame Intra-chr q21.3 Oncogene Transcription factor 57975 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARNT2-FAM183A ARNT2 chr15 80696888 - FAM183A chr1 43610798 + Exonic hg19 SARC TCGA-QQ-A5VA-01A 2 2 Out-of-frame Inter-chr q25.1 Transcription factor p34.2 57976 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARNT2-MS4A3 ARNT2 chr15 80873745 - MS4A3 chr11 59834424 + Exonic hg19 KIRC TCGA-B0-4688-01A 2 3 Out-of-frame Inter-chr q25.1 Transcription factor q12.1 Seq+ 57977 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARNT2-NDST1 ARNT2 chr15 80889603 - NDST1 chr5 149915262 + Exonic hg19 PRAD TCGA-HC-7748-01A 2 1 3'UTR-CDS Inter-chr q25.1 Transcription factor q33.1 57978 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARNT2-PDLIM5 ARNT2 chr15 80696888 - PDLIM5 chr4 95539155 + Exonic hg19 BRCA TCGA-EW-A1J2-01A 18 19 Out-of-frame Inter-chr q25.1 Transcription factor q22.3 Seq+ 57979 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARNT2-TNFAIP8L3 ARNT2 chr15 80750317 - TNFAIP8L3 chr15 51350640 - Exonic hg19 KIRC TCGA-BP-5169-01A 6 1 Out-of-frame Intra-chr q25.1 Transcription factor q21.2 57980 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARNT2-ZFAND3 ARNT2 chr15 80696888 - ZFAND3 chr6 38120011 + Exonic hg19 PRAD TCGA-HC-7752-01A 2 2 In-Frame Inter-chr q25.1 Transcription factor p21.2 57981 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARNTL-BTBD10 ARNTL chr11 13402801 - BTBD10 chr11 13410688 - Exonic hg19 UCEC TCGA-AJ-A3QS-01A 3 2 Out-of-frame Intra-chr p15.3 Tumor suppressor gene Transcription factor p15.3 57982 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARNTL-RIC8B ARNTL chr11 13381971 - RIC8B chr12 107219504 + Exonic hg19 SARC TCGA-DX-A3LT-01A 88 54 In-Frame Inter-chr p15.3 Tumor suppressor gene Transcription factor q23.3 Seq+ 57983 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARNTL-TEAD1 ARNTL chr11 13348014 - TEAD1 chr11 12883797 + Exonic hg19 BRCA TCGA-AO-A124-01A 4 5 5'UTR-CDS Intra-chr p15.3 Tumor suppressor gene Transcription factor p15.3 Transcription factor 57984 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARNTL-TEAD1 ARNTL chr11 13299470 - TEAD1 chr11 12883797 + Exonic hg19 HNSC TCGA-CV-6961-01A 2 3 5'UTR-CDS Intra-chr p15.3 Tumor suppressor gene Transcription factor p15.3 Transcription factor 57985 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARNTL2-ITPR2 ARNTL2 chr12 27543172 - ITPR2 chr12 26596583 - Exonic hg19 BRCA TCGA-A7-A4SD-01A 4 1 Out-of-frame Intra-chr p11.23 Transcription factor p11.23 Seq+ 57986 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARPC1A-TRRAP ARPC1A chr7 98931040 - TRRAP chr7 98579392 + Exonic hg19 PRAD TCGA-EJ-A46G-01A 9 13 In-Frame Intra-chr q22.1 q22.1 Atypical:PIKK Oncogene Seq+ 57987 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARPC1A-VAMP4 ARPC1A chr7 98923627 - VAMP4 chr1 171707603 - Exonic hg19 PRAD TCGA-YL-A8SJ-01B 4 4 5'UTR-5'UTR Inter-chr q22.1 q24.3 Seq+ 57988 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARPC1B-TRRAP ARPC1B chr7 98972404 - TRRAP chr7 98586388 + Exonic hg19 UCEC TCGA-AJ-A6NU-01A 5 43 5'UTR-CDS Intra-chr q22.1 q22.1 Atypical:PIKK Oncogene Seq+ 57989 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARPC4-TTLL3-GRM7 ARPC4-TTLL3 chr3 9845697 - GRM7 chr3 7188139 + Exonic hg19 BRCA TCGA-E9-A1RH-01A 60 15 Out-of-frame Intra-chr p25.3 p26.1 57990 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARRB1-ANKFN1 ARRB1 chr11 75062632 - ANKFN1 chr17 54305278 + Exonic hg19 BRCA TCGA-E2-A155-01A 5 4 Out-of-frame Inter-chr q13.4 q22 Seq+ 57991 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARRB1-CCDC90B ARRB1 chr11 74987883 - CCDC90B chr11 82991303 - Exonic hg19 SKCM TCGA-EB-A57M-01A 2 1 Out-of-frame Intra-chr q13.4 q14.1 Seq+ 57992 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARRB1-DLG2 ARRB1 chr11 75062632 - DLG2 chr11 84996409 - Exonic hg19 LUAD TCGA-93-8067-01A 4 3 Out-of-frame Intra-chr q13.4 q14.1 57993 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARRB1-GAB2 ARRB1 chr11 75062632 - GAB2 chr11 77991947 - Exonic hg19 BRCA TCGA-A2-A3KC-01A 8 7 Out-of-frame Intra-chr q13.4 q14.1 Seq+ 57994 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARRB1-GDPD5 ARRB1 chr11 75062632 - GDPD5 chr11 75201365 - Exonic hg19 BRCA TCGA-A7-A6VV-01A 18 11 CDS-5'UTR Intra-chr q13.4 q13.5 Seq+ 57995 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARRB1-GDPD5 ARRB1 chr11 75062632 - GDPD5 chr11 75201365 - Exonic hg19 BRCA TCGA-B6-A3ZX-01A 5 6 CDS-5'UTR Intra-chr q13.4 q13.5 Seq+ 57996 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARRB1-GDPD5 ARRB1 chr11 75062632 - GDPD5 chr11 75173934 - Exonic hg19 SKCM TCGA-FS-A1Z4-06A 7 10 Out-of-frame Intra-chr q13.4 q13.5 Seq+ 57997 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARRB1-GDPD5 ARRB1 chr11 74993006 - GDPD5 chr11 75173934 - Exonic hg19 LUAD TCGA-MP-A4TC-01A 69 31 In-Frame Intra-chr q13.4 q13.5 Seq+ 57998 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARRB1-GDPD5 ARRB1 chr11 74998359 - GDPD5 chr11 75173934 - Exonic hg19 UCS TCGA-N8-A56S-01A 23 11 Out-of-frame Intra-chr q13.4 q13.5 Seq+ 57999 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARRB1-KLHL35 ARRB1 chr11 75062632 - KLHL35 chr11 75137683 - Exonic hg19 LUAD TCGA-44-7660-01A 15 5 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 58000 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARRB1-LY9 ARRB1 chr11 75062632 - LY9 chr1 160783426 + Exonic hg19 SARC TCGA-DX-A7EU-01A 13 9 Out-of-frame Inter-chr q13.4 q23.3 Seq+ 58001 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARRB1-PAK1 ARRB1 chr11 75062632 - PAK1 chr11 77103586 - Exonic hg19 BRCA TCGA-A2-A04U-01A 5 1 CDS-5'UTR Intra-chr q13.4 q14.1 STE:STE20 Seq+ 58002 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARRB1-PAK1 ARRB1 chr11 74993006 - PAK1 chr11 77103583 - Exonic hg19 SKCM TCGA-YG-AA3P-06A 3 4 CDS-5'UTR Intra-chr q13.4 q14.1 STE:STE20 Seq+ 58003 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARRB1-PICALM ARRB1 chr11 75062632 - PICALM chr11 85726006 - Exonic hg19 BRCA TCGA-S3-A6ZG-01A 18 9 In-Frame Intra-chr q13.4 q14.2 Seq+ 58004 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARRB1-PRCP ARRB1 chr11 75062632 - PRCP chr11 82550467 - Exonic hg19 SKCM TCGA-EE-A2GR-06A 15 7 Out-of-frame Intra-chr q13.4 q14.1 Seq+ 58005 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARRB1-RASSF3 ARRB1 chr11 74992119 - RASSF3 chr12 65078567 + Exonic hg19 BRCA TCGA-A8-A0A9-01A 7 13 Out-of-frame Inter-chr q13.4 q14.2 Tumor suppressor gene Seq+ 58006 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARRB1-UVRAG ARRB1 chr11 75062632 - UVRAG chr11 75715049 + Exonic hg19 BRCA TCGA-A1-A0SM-01A 18 7 Out-of-frame Intra-chr q13.4 q13.5 Tumor suppressor gene Seq+ 58007 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARRDC1-AL772363.1 ARRDC1 chr9 140500287 - AL772363.1 chr9 140762689 - Exonic hg19 TGCT TCGA-XE-AANI-01A 3 5 Out-of-frame Intra-chr q34.3 q34.3 58008 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARRDC2-KCNN1 ARRDC2 chr19 18112382 - KCNN1 chr19 18084617 + Exonic hg19 OV TCGA-25-1329-01A 3 4 5'UTR-5'UTR Intra-chr p13.11 p13.11 Seq+ 58009 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARRDC3-SGCD ARRDC3 chr5 90672438 - SGCD chr5 155771499 + Exonic hg19 PRAD TCGA-EJ-5542-01A 3 3 In-Frame Intra-chr q14.3 q33.2 Seq+ 58010 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARSB-DMGDH ARSB chr5 78251118 - DMGDH chr5 78322404 - Exonic hg19 LIHC TCGA-2Y-A9H0-01A 15 11 In-Frame Intra-chr q14.1 q14.1 Seq+ 58011 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARSG-CDK12 ARSG chr17 66352945 - CDK12 chr17 37667782 + Exonic hg19 BRCA TCGA-3C-AALI-01A 2 6 In-Frame Intra-chr q24.2 q12 Oncogene Seq+ 58012 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARSG-CEP112 ARSG chr17 66303852 - CEP112 chr17 64092750 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 5 8 Out-of-frame Intra-chr q24.2 q24.1 Seq+ 58013 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARSG-TEX2 ARSG chr17 66397591 - TEX2 chr17 62291602 - Exonic hg19 BRCA TCGA-D8-A27G-01A 4 1 CDS-5'UTR Intra-chr q24.2 q23.3 Seq+ 58014 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ART3-NUP54 ART3 chr4 77025122 - NUP54 chr4 77036647 - Exonic hg19 LUSC TCGA-43-3920-01A 63 54 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 58015 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ART3-SLC25A13 ART3 chr4 76997111 - SLC25A13 chr7 95776008 - Exonic hg19 LUSC TCGA-43-7658-01A 52 46 In-Frame Inter-chr q21.1 q21.3 Seq+ 58016 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ARV1-CAPN9 ARV1 chr1 231126009 - CAPN9 chr1 230914719 + Exonic hg19 SKCM TCGA-ER-A19E-06A 5 1 Out-of-frame Intra-chr q42.2 q42.2 Seq+ 58017 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AS3MT-GBF1 AS3MT chr10 104650435 - GBF1 chr10 104103808 + Exonic hg19 LUAD TCGA-91-8499-01A 2 1 Out-of-frame Intra-chr q24.32 q24.32 58018 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AS3MT-HERC4 AS3MT chr10 104636792 - HERC4 chr10 69716733 - Exonic hg19 SARC TCGA-FX-A76Y-01A 8 1 Out-of-frame Intra-chr q24.32 q21.3 Seq+ 58019 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AS3MT-SUFU AS3MT chr10 104650435 - SUFU chr10 104356897 + Exonic hg19 ACC TCGA-OR-A5J7-01A 6 2 In-Frame Intra-chr q24.32 q24.32 Oncogene Tumor suppressor gene Seq+ 58020 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASAH1-DDX21 ASAH1 chr8 17913961 - DDX21 chr10 70723858 + Exonic hg19 PRAD TCGA-HC-7210-01A 2 4 Out-of-frame Inter-chr p22 q22.1 58021 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASAH2-SGMS1 ASAH2 chr10 52002962 - SGMS1 chr10 52104105 - Exonic hg19 STAD TCGA-CG-4443-01A 3 8 CDS-5'UTR Intra-chr q11.23 q11.23 Tumor suppressor gene 58022 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASAP1-ADCY2 ASAP1 chr8 131226802 - ADCY2 chr5 7784478 + Exonic hg19 BLCA TCGA-S5-A6DX-01A 2 1 Out-of-frame Inter-chr q24.22 p15.31 Seq+ 58023 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASAP1-CDKN2B ASAP1 chr8 131370263 - CDKN2B chr9 22006246 - Exonic hg19 SKCM TCGA-FS-A1ZE-06A 3 2 In-Frame Inter-chr q24.22 p21.3 Oncogene Tumor suppressor gene Seq+ 58024 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASAP1-CLVS1 ASAP1 chr8 131370263 - CLVS1 chr8 62366700 + Exonic hg19 BRCA TCGA-C8-A27A-01A 34 11 In-Frame Intra-chr q24.22 q12.2 Seq+ 58025 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASAP1-IFLTD1 ASAP1 chr8 131370263 - IFLTD1 chr12 25679889 - Exonic hg19 UCEC TCGA-EY-A3L3-01A 2 2 Out-of-frame Inter-chr q24.22 Tumor suppressor gene Seq+ 58026 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASAP1-KCNH1 ASAP1 chr8 131088594 - KCNH1 chr1 210977508 - Exonic hg19 BRCA TCGA-B6-A0X1-01A 6 7 In-Frame Inter-chr q24.22 Seq+ 58027 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASAP1-KHDRBS3 ASAP1 chr8 131370263 - KHDRBS3 chr8 136533480 + Exonic hg19 LIHC TCGA-RC-A7SK-01A 2 3 Out-of-frame Intra-chr q24.22 q24.23 Seq+ 58028 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASAP1-LRRCC1 ASAP1 chr8 131249168 - LRRCC1 chr8 86057624 + Exonic hg19 LUAD TCGA-78-7153-01A 3 1 Out-of-frame Intra-chr q24.22 q21.2 Seq+ 58029 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASAP1-RAD51B ASAP1 chr8 131199482 - RAD51B chr14 68290259 + Exonic hg19 LUAD TCGA-05-4422-01A 4 3 CDS-5'UTR Inter-chr q24.22 q24.1 Seq+ 58030 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASAP1-RIMS2 ASAP1 chr8 131370263 - RIMS2 chr8 105105699 + Exonic hg19 STAD TCGA-BR-A4CR-01A 2 23 Out-of-frame Intra-chr q24.22 q22.3 Seq+ 58031 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASAP1-SAMD12 ASAP1 chr8 131370263 - SAMD12 chr8 119209971 - Exonic hg19 LUAD TCGA-35-4122-01A 3 9 Out-of-frame Intra-chr q24.22 q24.12 Seq+ 58032 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASAP1-TRAPPC9 ASAP1 chr8 131226802 - TRAPPC9 chr8 140743471 - Exonic hg19 SARC TCGA-DX-A6YX-01A 597 337 In-Frame Intra-chr q24.22 q24.3 58033 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASAP2-MBOAT2 ASAP2 chr2 9437574 - MBOAT2 chr2 9098771 - Exonic hg19 LUAD TCGA-49-AAR9-01A 24 39 In-Frame Intra-chr p25.1 p25.1 Seq+ 58034 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASB1-CLVS1 ASB1 chr2 239353368 - CLVS1 chr8 62212236 + Exonic hg19 KIRC TCGA-BP-4782-01A 7 5 CDS-5'UTR Inter-chr q37.3 q12.2 Seq+ 58035 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASB1-RBM44 ASB1 chr2 239342336 - RBM44 chr2 238742640 + Exonic hg19 UCS TCGA-N8-A56S-01A 22 12 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 58036 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASB1-SH3BP4 ASB1 chr2 239344654 - SH3BP4 chr2 235943515 + Exonic hg19 SKCM TCGA-EE-A17Z-06A 11 7 CDS-5'UTR Intra-chr q37.3 q37.2 Seq+ 58037 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASB1-TRAF3IP1 ASB1 chr2 239335760 - TRAF3IP1 chr2 239306100 + Exonic hg19 BRCA TCGA-AR-A1AH-01A 2 3 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 58038 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASB3-CTPS ASB3 chr2 53921021 - CTPS chr1 41473121 + Exonic hg19 KIRP TCGA-G7-A8LD-01A 10 4 Out-of-frame Inter-chr p16.2 58039 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASB3-MTA3 ASB3 chr2 54013958 - MTA3 chr2 42867313 + Exonic hg19 ACC TCGA-OR-A5KY-01A 10 5 5'UTR-CDS Intra-chr p16.2 p21 Seq+ 58040 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASB7-DEXI ASB7 chr15 101152632 - DEXI chr16 11023416 - Exonic hg19 PRAD TCGA-EJ-5498-01A 3 2 CDS-3'UTR Inter-chr q26.3 p13.13 Seq+ 58041 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASB8-DGKA ASB8 chr12 48547151 - DGKA chr12 56330207 + Exonic hg19 PRAD TCGA-J4-A67S-01A 8 1 CDS-5'UTR Intra-chr q13.11 q13.2 Seq+ 58042 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASB8-NELL2 ASB8 chr12 48544984 - NELL2 chr12 44902767 - Exonic hg19 LUAD TCGA-86-8279-01A 3 2 In-Frame Intra-chr q13.11 q12 Seq+ 58043 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASCC1-CDH23 ASCC1 chr10 73956569 - CDH23 chr10 73537437 + Exonic hg19 STAD TCGA-CG-4449-01A 3 9 In-Frame Intra-chr q22.1 q22.1 Seq+ 58044 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASCC1-DNAJB12 ASCC1 chr10 73912627 - DNAJB12 chr10 74095689 - Exonic hg19 PCPG TCGA-S7-A7WL-01A 18 13 Out-of-frame Intra-chr q22.1 q22.1 58045 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASCC1-MICU1 ASCC1 chr10 73892815 - MICU1 chr10 74135630 - Exonic hg19 BRCA TCGA-A8-A07O-01A 3 5 In-Frame Intra-chr q22.1 q22.1 Seq+ 58046 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASCC1-MICU1 ASCC1 chr10 73956569 - MICU1 chr10 74135630 - Exonic hg19 CESC TCGA-C5-A7UC-01A 4 5 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 58047 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASCC1-MICU1 ASCC1 chr10 73956569 - MICU1 chr10 74135630 - Exonic hg19 STAD TCGA-CG-4449-01A 5 6 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 58048 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASCC1-MICU1 ASCC1 chr10 73956569 - MICU1 chr10 74167795 - Exonic hg19 HNSC TCGA-CV-6953-01A 2 2 In-Frame Intra-chr q22.1 q22.1 Seq+ 58049 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASCC1-MICU1 ASCC1 chr10 73956569 - MICU1 chr10 74167795 - Exonic hg19 BRCA TCGA-E9-A1RB-01A 15 16 In-Frame Intra-chr q22.1 q22.1 Seq+ 58050 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASCC1-MICU1 ASCC1 chr10 73956569 - MICU1 chr10 74183129 - Exonic hg19 BRCA TCGA-OL-A66I-01A 24 29 In-Frame Intra-chr q22.1 q22.1 Seq+ 58051 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASCC2-MTMR3 ASCC2 chr22 30230478 - MTMR3 chr22 30353025 + Exonic hg19 CESC TCGA-VS-A9U5-01A 2 1 5'UTR-5'UTR Intra-chr q12.2 q12.2 58052 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASCC2-SF3A1 ASCC2 chr22 30234167 - SF3A1 chr22 30736801 - Exonic hg19 PAAD TCGA-IB-AAUQ-01A 2 1 5'UTR-CDS Intra-chr q12.2 q12.2 58053 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASCC3-ATL1 ASCC3 chr6 101053444 - ATL1 chr14 51094749 + Exonic hg19 BRCA TCGA-A8-A06T-01A 10 1 Out-of-frame Inter-chr q16.3 q22.1 Seq+ 58054 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASCC3-GRIK2 ASCC3 chr6 101214441 - GRIK2 chr6 102192474 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 3 2 Out-of-frame Intra-chr q16.3 q16.3 Seq+ 58055 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASCC3-SERINC1 ASCC3 chr6 101163338 - SERINC1 chr6 122768149 - Exonic hg19 LGG TCGA-E1-5304-01A 3 4 Out-of-frame Intra-chr q16.3 q22.31 Seq+ 58056 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASCC3-SYNE1 ASCC3 chr6 101315784 - SYNE1 chr6 152563575 - Exonic hg19 PRAD TCGA-VP-A87C-01A 2 4 In-Frame Intra-chr q16.3 q25.2 Oncogene 58057 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASCC3-TPD52L1 ASCC3 chr6 100988039 - TPD52L1 chr6 125541224 + Exonic hg19 READ TCGA-AH-6644-01A 5 1 Out-of-frame Intra-chr q16.3 q22.31 58058 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASCC3-WASF1 ASCC3 chr6 101315784 - WASF1 chr6 110448832 - Exonic hg19 SARC TCGA-HB-A3YV-01A 6 4 CDS-5'UTR Intra-chr q16.3 q21 58059 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASH1L-AIM2 ASH1L chr1 155531944 - AIM2 chr1 159043309 - Exonic hg19 BRCA TCGA-A8-A07I-01A 7 2 5'UTR-5'UTR Intra-chr q22 Transcription factor q23.2 Tumor suppressor gene Seq+ 58060 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASH1L-ARHGEF2 ASH1L chr1 155408118 - ARHGEF2 chr1 155952991 - Exonic hg19 BRCA TCGA-A7-A26G-01A 22 11 CDS-5'UTR Intra-chr q22 Transcription factor q22 Seq+ 58061 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASH1L-C1orf87 ASH1L chr1 155349834 - C1orf87 chr1 60521110 - Exonic hg19 OV TCGA-24-1553-01A 2 2 Out-of-frame Intra-chr q22 Transcription factor p32.1 Seq+ 58062 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASH1L-FAM78B ASH1L chr1 155365250 - FAM78B chr1 166040000 - Exonic hg19 BRCA TCGA-AR-A0TT-01A 11 16 Out-of-frame Intra-chr q22 Transcription factor q24.1 Seq+ 58063 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASH1L-GATAD2B ASH1L chr1 155490891 - GATAD2B chr1 153800824 - Exonic hg19 BRCA TCGA-A8-A090-01A 3 2 CDS-5'UTR Intra-chr q22 Transcription factor Transcription factor 58064 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASH1L-GON4L ASH1L chr1 155531944 - GON4L chr1 155730432 - Exonic hg19 BLCA TCGA-4Z-AA87-01A 8 4 5'UTR-CDS Intra-chr q22 Transcription factor q22 Seq+ 58065 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASH1L-GON4L ASH1L chr1 155531944 - GON4L chr1 155786053 - Exonic hg19 LUSC TCGA-L3-A524-01A 9 3 5'UTR-CDS Intra-chr q22 Transcription factor q22 Seq+ 58066 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASH1L-GPATCH4 ASH1L chr1 155317447 - GPATCH4 chr1 156568896 - Exonic hg19 BRCA TCGA-AN-A0XV-01A 2 1 CDS-5'UTR Intra-chr q22 Transcription factor q23.1 Seq+ 58067 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASH1L-INSRR ASH1L chr1 155490891 - INSRR chr1 156824095 - Exonic hg19 LUAD TCGA-91-A4BC-01A 11 8 Out-of-frame Intra-chr q22 Transcription factor q23.1 Seq+ 58068 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASH1L-IQGAP3 ASH1L chr1 155531944 - IQGAP3 chr1 156501039 - Exonic hg19 UCEC TCGA-A5-A3LP-01A 25 15 5'UTR-CDS Intra-chr q22 Transcription factor q22 Seq+ 58069 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASH1L-NSL1 ASH1L chr1 155490891 - NSL1 chr1 212960979 - Exonic hg19 PRAD TCGA-EJ-5518-01A 11 4 In-Frame Intra-chr q22 Transcription factor q32.3 Seq+ 58070 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASH1L-RC3H1 ASH1L chr1 155531944 - RC3H1 chr1 173962273 - Exonic hg19 SARC TCGA-DX-AB2S-01A 6 2 5'UTR-5'UTR Intra-chr q22 Transcription factor q25.1 Seq+ 58071 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASH1L-RGS7 ASH1L chr1 155447677 - RGS7 chr1 240979715 - Exonic hg19 CESC TCGA-EA-A5O9-01A 21 2 Out-of-frame Intra-chr q22 Transcription factor q43 58072 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASH1L-RIT1 ASH1L chr1 155307880 - RIT1 chr1 155874595 - Exonic hg19 SARC TCGA-IW-A3M5-01A 8 2 In-Frame Intra-chr q22 Transcription factor q22 58073 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASH1L-SELL ASH1L chr1 155531944 - SELL chr1 169665694 - Exonic hg19 SARC TCGA-DX-A1KY-01A 44 49 5'UTR-CDS Intra-chr q22 Transcription factor q24.2 Seq+ 58074 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASH1L-SLC28A3 ASH1L chr1 155531944 - SLC28A3 chr9 86909190 - Exonic hg19 STAD TCGA-BR-4357-01A 5 14 5'UTR-CDS Inter-chr q22 Transcription factor q21.33 58075 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASH1L-SPRR2G ASH1L chr1 155408118 - SPRR2G chr1 153122607 - Exonic hg19 BLCA TCGA-DK-A6B1-01A 2 2 CDS-5'UTR Intra-chr q22 Transcription factor q21.3 Seq+ 58076 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASH1L-UBQLN4 ASH1L chr1 155531944 - UBQLN4 chr1 156021648 - Exonic hg19 BLCA TCGA-XF-AAMY-01A 7 5 5'UTR-CDS Intra-chr q22 Transcription factor q22 Seq+ 58077 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASH1L-ZNF687 ASH1L chr1 155531944 - ZNF687 chr1 151263191 + Exonic hg19 DLBC TCGA-FF-8043-01A 12 13 5'UTR-CDS Intra-chr q22 Transcription factor q21.3 Transcription factor Seq+ 58078 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASH2L-C20orf72 ASH2L chr8 37971805 - C20orf72 chr20 17968809 + Exonic hg19 BRCA TCGA-E2-A15A-01A 25 17 Out-of-frame Inter-chr p11.23 Seq+ 58079 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASH2L-C20orf72 ASH2L chr8 37971805 - C20orf72 chr20 17968809 + Exonic hg19 BRCA TCGA-E2-A15A-06A 27 17 Out-of-frame Inter-chr p11.23 Seq+ 58080 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASH2L-C8orf86 ASH2L chr8 37968351 - C8orf86 chr8 38374030 - Exonic hg19 HNSC TCGA-CR-7364-01A 6 6 In-Frame Intra-chr p11.23 p11.22 Seq+ 58081 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASH2L-CASS4 ASH2L chr8 37991064 - CASS4 chr20 55020956 + Exonic hg19 SARC TCGA-DX-A3LS-01A 21 11 In-Frame Inter-chr p11.23 q13.31 Seq+ 58082 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASH2L-ZFYVE28 ASH2L chr8 37976881 - ZFYVE28 chr4 2343342 - Exonic hg19 BRCA TCGA-LL-A7T0-01A 11 6 Out-of-frame Inter-chr p11.23 p16.3 Seq+ 58083 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASPH-CHMP1A ASPH chr8 62593527 - CHMP1A chr16 89713739 - Exonic hg19 BLCA TCGA-DK-AA6S-01A 2 1 In-Frame Inter-chr q12.3 q24.3 58084 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASPH-CLCN3 ASPH chr8 62537096 - CLCN3 chr4 170623929 + Exonic hg19 BLCA TCGA-GV-A3QI-01A 2 4 Out-of-frame Inter-chr q12.3 q33 58085 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASPH-DCLK1 ASPH chr8 62438536 - DCLK1 chr13 36397012 - Exonic hg19 LIHC TCGA-DD-A4NE-01A 5 2 Out-of-frame Inter-chr q12.3 q13.3 CAMK:DCAMKL Seq+ 58086 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASPH-EIF4EBP1 ASPH chr8 62430087 - EIF4EBP1 chr8 37914599 + Exonic hg19 LIHC TCGA-KR-A7K8-01A 10 12 Out-of-frame Intra-chr q12.3 p11.23 Seq+ 58087 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASPH-RP1 ASPH chr8 62430087 - RP1 chr8 55619003 + Exonic hg19 PRAD TCGA-HC-A6AO-01A 3 2 CDS-3'UTR Intra-chr q12.3 q11.23 58088 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASPH-RSF1 ASPH chr8 62430087 - RSF1 chr11 77413540 - Exonic hg19 BRCA TCGA-A2-A3KD-01A 11 13 Out-of-frame Inter-chr q12.3 q14.1 Seq+ 58089 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASPH-TACC1 ASPH chr8 62531537 - TACC1 chr8 38599869 + Exonic hg19 BLCA TCGA-YC-A89H-01A 7 1 CDS-5'UTR Intra-chr q12.3 p11.22 Seq+ 58090 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASPSCR1-COL5A3 ASPSCR1 chr17 79937115 - COL5A3 chr19 10114821 - Exonic hg19 BRCA TCGA-D8-A140-01A 7 3 Out-of-frame Inter-chr q25.3 p13.2 Seq+ 58091 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASS1-NCS1 ASS1 chr9 133355836 - NCS1 chr9 132963237 + Exonic hg19 BRCA TCGA-A8-A0A4-01A 14 16 In-Frame Intra-chr q34.11 Tumor suppressor gene q34.11 Seq+ 58092 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASTN2-ARHGDIG ASTN2 chr9 119976637 - ARHGDIG chr16 332025 + Exonic hg19 GBM TCGA-02-2483-01A 19 48 In-Frame Inter-chr q33.1 p13.3 Seq+ 58093 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASTN2-C9orf29 ASTN2 chr9 119802098 - C9orf29 chr9 114365393 - Exonic hg19 BRCA TCGA-A2-A0EW-01A 10 10 Out-of-frame Intra-chr q33.1 58094 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASTN2-PALM2-AKAP2 ASTN2 chr9 119380603 - PALM2-AKAP2 chr9 112898407 + Exonic hg19 SKCM TCGA-EE-A29A-06A 20 7 Out-of-frame Intra-chr q33.1 q31.3 58095 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASTN2-PNMT ASTN2 chr9 120053605 - PNMT chr17 37825882 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 90 37 Out-of-frame Inter-chr q33.1 q12 Seq+ 58096 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASTN2-TMEM38B ASTN2 chr9 119858323 - TMEM38B chr9 108467878 + Exonic hg19 LGG TCGA-DU-A6S7-01A 2 2 In-Frame Intra-chr q33.1 q31.2 58097 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASTN2-TNFAIP8L1 ASTN2 chr9 119249638 - TNFAIP8L1 chr19 4651879 + Exonic hg19 PRAD TCGA-G9-A9S7-01A 2 5 CDS-5'UTR Inter-chr q33.1 p13.3 58098 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASXL1-C20orf160 ASXL1 chr20 30956926 - C20orf160 chr20 30613659 + Exonic hg19 UCS TCGA-N9-A4PZ-01A 7 8 Out-of-frame Intra-chr q11.21 Oncogene Tumor suppressor gene 58099 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASXL1-DEFB118 ASXL1 chr20 30954269 - DEFB118 chr20 29960660 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 7 2 Out-of-frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 58100 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASXL1-PDRG1 ASXL1 chr20 30959677 - PDRG1 chr20 30536685 - Exonic hg19 BRCA TCGA-BH-A1FM-01A 5 7 Out-of-frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 58101 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASXL1-TM9SF4 ASXL1 chr20 30956926 - TM9SF4 chr20 30720816 + Exonic hg19 LUAD TCGA-91-7771-01A 4 4 In-Frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 58102 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASXL1-TM9SF4 ASXL1 chr20 30956926 - TM9SF4 chr20 30720816 + Exonic hg19 BRCA TCGA-A7-A13D-01B 9 3 In-Frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 58103 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASXL1-TM9SF4 ASXL1 chr20 30956926 - TM9SF4 chr20 30720816 + Exonic hg19 STAD TCGA-VQ-A8E2-01A 8 49 In-Frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 58104 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASXL1-TPX2 ASXL1 chr20 30956926 - TPX2 chr20 30359363 + Exonic hg19 ESCA TCGA-L5-A891-01A 2 12 Out-of-frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 58105 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASXL1-XKR7 ASXL1 chr20 30956926 - XKR7 chr20 30582871 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 4 1 Out-of-frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 58106 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASXL2-C2orf44 ASXL2 chr2 26058407 - C2orf44 chr2 24262382 - Exonic hg19 PRAD TCGA-KK-A8IM-01A 2 1 CDS-5'UTR Intra-chr p23.3 58107 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASXL2-DENND2A ASXL2 chr2 26101035 - DENND2A chr7 140302342 - Exonic hg19 UCEC TCGA-PG-A915-01A 35 20 CDS-5'UTR Inter-chr p23.3 q34 Seq+ 58108 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASXL2-FKBP8 ASXL2 chr2 26058407 - FKBP8 chr19 18652805 - Exonic hg19 BRCA TCGA-AR-A0U0-01A 18 24 CDS-5'UTR Inter-chr p23.3 p13.11 Seq+ 58109 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASXL2-HSPH1 ASXL2 chr2 26101035 - HSPH1 chr13 31733000 - Exonic hg19 BRCA TCGA-AR-A24H-01A 13 7 Out-of-frame Inter-chr p23.3 q12.3 Seq+ 58110 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASXL2-KIF3C ASXL2 chr2 26101035 - KIF3C chr2 26179313 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 3 3 In-Frame Intra-chr p23.3 p23.3 Seq+ 58111 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASXL2-MINPP1 ASXL2 chr2 26068350 - MINPP1 chr10 89272881 + Exonic hg19 LUSC TCGA-90-7769-01A 8 6 Out-of-frame Inter-chr p23.3 q23.2 Seq+ 58112 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASXL2-MORC3 ASXL2 chr2 26101035 - MORC3 chr21 37744672 + Exonic hg19 PRAD TCGA-HC-A6AN-01A 3 3 In-Frame Inter-chr p23.3 q22.12 58113 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASXL2-PPWD1 ASXL2 chr2 26029098 - PPWD1 chr5 64863340 + Exonic hg19 ACC TCGA-OR-A5J2-01A 11 2 Out-of-frame Inter-chr p23.3 q12.3 Seq+ 58114 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ASXL2-SRBD1 ASXL2 chr2 26101035 - SRBD1 chr2 45715470 - Exonic hg19 LUAD TCGA-44-7670-01A 69 68 Out-of-frame Intra-chr p23.3 p21 Seq+ 58115 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATAD1-ANKRD22 ATAD1 chr10 89550067 - ANKRD22 chr10 90583135 - Exonic hg19 LGG TCGA-FG-A70Z-01A 11 11 Out-of-frame Intra-chr q23.31 Seq+ 58116 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATAD1-C10orf11 ATAD1 chr10 89544227 - C10orf11 chr10 78316967 + Exonic hg19 SARC TCGA-DX-A8BU-01A 36 23 In-Frame Intra-chr Seq+ 58117 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATAD1-JMJD1C ATAD1 chr10 89530709 - JMJD1C chr10 64968995 - Exonic hg19 PRAD TCGA-J4-A83I-01A 3 10 In-Frame Intra-chr q21.3 Seq+ 58118 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATAD1-LIPF ATAD1 chr10 89550067 - LIPF chr10 90427044 + Exonic hg19 LGG TCGA-E1-A7YN-01A 21 34 In-Frame Intra-chr q23.31 Seq+ 58119 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATAD1-PAPSS2 ATAD1 chr10 89574195 - PAPSS2 chr10 89468953 + Exonic hg19 LGG TCGA-FG-A70Z-01A 9 12 In-Frame Intra-chr q23.2 Seq+ 58120 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATAD1-RNLS ATAD1 chr10 89574195 - RNLS chr10 90122482 - Exonic hg19 LUAD TCGA-55-A48Y-01A 28 32 Out-of-frame Intra-chr q23.31 Seq+ 58121 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATAD2-ERBB4 ATAD2 chr8 124381298 - ERBB4 chr2 212530202 - Exonic hg19 HNSC TCGA-CV-6935-01A 20 10 Out-of-frame Inter-chr q24.13 q34 Oncogene Tumor suppressor gene Seq+ 58122 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATAD2-FAM178B ATAD2 chr8 124346118 - FAM178B chr2 97595057 - Exonic hg19 BRCA TCGA-BH-A203-01A 2 3 In-Frame Inter-chr q24.13 q11.2 Seq+ 58123 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATAD2-KHDRBS3 ATAD2 chr8 124346118 - KHDRBS3 chr8 136533480 + Exonic hg19 UCEC TCGA-DF-A2KR-01A 4 2 In-Frame Intra-chr q24.13 q24.23 Seq+ 58124 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATAD2-LRP12 ATAD2 chr8 124408427 - LRP12 chr8 105521302 - Exonic hg19 LUAD TCGA-93-A4JQ-01A 7 16 Out-of-frame Intra-chr q24.13 q22.3 Seq+ 58125 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATAD2-PODXL ATAD2 chr8 124351551 - PODXL chr7 131196192 - Exonic hg19 BRCA TCGA-E9-A243-01A 26 16 In-Frame Inter-chr q24.13 q32.3 Seq+ 58126 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATAD2-RAD51B ATAD2 chr8 124381298 - RAD51B chr14 68758601 + Exonic hg19 BRCA TCGA-OL-A66I-01A 6 1 Out-of-frame Inter-chr q24.13 q24.1 58127 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATAD2-WDYHV1 ATAD2 chr8 124392769 - WDYHV1 chr8 124440164 + Exonic hg19 LUAD TCGA-05-4422-01A 17 1 In-Frame Intra-chr q24.13 q24.13 Seq+ 58128 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATAD2-WDYHV1 ATAD2 chr8 124408427 - WDYHV1 chr8 124440164 + Exonic hg19 UCEC TCGA-AX-A3GI-01A 7 3 Out-of-frame Intra-chr q24.13 q24.13 Seq+ 58129 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATAD2-WDYHV1 ATAD2 chr8 124384877 - WDYHV1 chr8 124448693 + Exonic hg19 SARC TCGA-DX-AB2V-01A 4 1 Out-of-frame Intra-chr q24.13 q24.13 Seq+ 58130 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATAD2B-AC008073.5 ATAD2B chr2 24092533 - AC008073.5 chr2 24290721 - Exonic hg19 LGG TCGA-DU-6397-01A 3 5 Out-of-frame Intra-chr p23.3 58131 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATAD2B-ITSN2 ATAD2B chr2 24021008 - ITSN2 chr2 24426652 - Exonic hg19 BRCA TCGA-LL-A740-01A 2 1 Out-of-frame Intra-chr p23.3 p23.3 58132 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATAD5-EFCAB5 ATAD5 chr17 29164332 - EFCAB5 chr17 28409909 + Exonic hg19 LUAD TCGA-35-5375-01A 2 1 In-Frame Intra-chr q11.2 q11.2 58133 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATAD5-IKZF3 ATAD5 chr17 29196664 - IKZF3 chr17 37922746 - Exonic hg19 ESCA TCGA-L5-A4OU-01A 7 82 In-Frame Intra-chr q11.2 q21.1 Tumor suppressor gene Transcription factor Seq+ 58134 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATAD5-PSMA1 ATAD5 chr17 29182345 - PSMA1 chr11 14540587 - Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 2 5 Out-of-frame Inter-chr q11.2 p15.2 Seq+ 58135 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATAD5-PTP4A1 ATAD5 chr17 29187630 - PTP4A1 chr6 64286341 + Exonic hg19 BLCA TCGA-GC-A3RB-01A 9 6 CDS-5'UTR Inter-chr q11.2 q12 Seq+ 58136 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATAD5-QRICH1 ATAD5 chr17 29205114 - QRICH1 chr3 49095323 - Exonic hg19 SARC TCGA-DX-A6YS-01A 3 1 Out-of-frame Inter-chr q11.2 p21.31 58137 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATAD5-SIPA1L3 ATAD5 chr17 29185341 - SIPA1L3 chr19 38652893 + Exonic hg19 BLCA TCGA-DK-A2I6-01A 2 3 In-Frame Inter-chr q11.2 q13.13 Seq+ 58138 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATE1-DNAJB12 ATE1 chr10 123670421 - DNAJB12 chr10 74104885 - Exonic hg19 LUSC TCGA-43-8116-01A 6 3 In-Frame Intra-chr q26.13 q22.1 Seq+ 58139 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATE1-NSMCE4A ATE1 chr10 123658356 - NSMCE4A chr10 123721032 - Exonic hg19 PAAD TCGA-FB-A4P5-01A 3 5 Out-of-frame Intra-chr q26.13 q26.13 Seq+ 58140 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATE1-ZRANB1 ATE1 chr10 123681864 - ZRANB1 chr10 126670278 + Exonic hg19 BRCA TCGA-E9-A229-01A 34 32 In-Frame Intra-chr q26.13 q26.13 Seq+ 58141 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATF1-GRIP1 ATF1 chr12 51174021 - GRIP1 chr12 66990707 - Exonic hg19 LUAD TCGA-78-7150-01A 3 2 Out-of-frame Intra-chr q13.12 Oncogene Transcription factor q14.3 Seq+ 58142 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATF2-SOS2 ATF2 chr2 175976296 - SOS2 chr14 50641270 - Exonic hg19 BLCA TCGA-GU-A42Q-01A 5 6 In-Frame Inter-chr q31.1 Transcription factor q21.3 Seq+ 58143 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATF3-CDH20 ATF3 chr1 212791576 - CDH20 chr18 59157635 + Exonic hg19 LUSC TCGA-22-5483-01A 2 2 Out-of-frame Inter-chr q32.3 Tumor suppressor gene Transcription factor q21.33 Oncogene Seq+ 58144 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATF3-USH2A ATF3 chr1 212791576 - USH2A chr1 216011445 - Exonic hg19 PRAD TCGA-VN-A943-01A 4 10 In-Frame Intra-chr q32.3 Tumor suppressor gene Transcription factor q41 Seq+ 58145 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATF6-GJA5 ATF6 chr1 161751789 - GJA5 chr1 147231379 - Exonic hg19 LUAD TCGA-78-7146-01A 6 4 CDS-5'UTR Intra-chr q23.3 Transcription factor q21.2 Seq+ 58146 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATF6-ODZ3 ATF6 chr1 161762117 - ODZ3 chr4 183522077 + Exonic hg19 SARC TCGA-VT-A80J-01A 8 18 In-Frame Inter-chr q23.3 Transcription factor 58147 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATF6-ODZ3 ATF6 chr1 161762117 - ODZ3 chr4 183522077 + Exonic hg19 SARC TCGA-VT-A80J-02A 19 23 In-Frame Inter-chr q23.3 Transcription factor 58148 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATF6-PCP4L1 ATF6 chr1 161772062 - PCP4L1 chr1 161253458 + Exonic hg19 LUAD TCGA-44-7660-01A 8 7 In-Frame Intra-chr q23.3 Transcription factor q23.3 Seq+ 58149 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATF6-SH2D1B ATF6 chr1 161772062 - SH2D1B chr1 162367105 - Exonic hg19 BRCA TCGA-EW-A1PH-01A 77 48 In-Frame Intra-chr q23.3 Transcription factor q23.3 Seq+ 58150 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATF6-VCL ATF6 chr1 161736232 - VCL chr10 75854029 + Exonic hg19 PRAD TCGA-ZG-A9LY-01A 13 18 Out-of-frame Inter-chr q23.3 Transcription factor q22.2 Seq+ 58151 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATF6B-CMAHP ATF6B chr6 32084257 - CMAHP chr6 25115328 - Exonic hg19 HNSC TCGA-BA-4078-01A 24 7 CDS-3'UTR Intra-chr Transcription factor p22.3 Seq+ 58152 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATF7-ATP5G2 ATF7 chr12 54020063 - ATP5G2 chr12 54070182 - Exonic hg19 HNSC TCGA-BB-4224-01A 23 7 5'UTR-5'UTR Intra-chr q13.13 Transcription factor q13.13 Seq+ 58153 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATF7-ATP5G2 ATF7 chr12 53994737 - ATP5G2 chr12 54063732 - Exonic hg19 BRCA TCGA-OL-A66P-01A 45 43 In-Frame Intra-chr q13.13 Transcription factor q13.13 Seq+ 58154 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATF7-LYZ ATF7 chr12 54020063 - LYZ chr12 69746000 + Exonic hg19 SARC TCGA-X6-A8C6-01A 9 6 5'UTR-CDS Intra-chr q13.13 Transcription factor q15 Seq+ 58155 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATF7-SPATS2 ATF7 chr12 53946325 - SPATS2 chr12 49890616 + Exonic hg19 BRCA TCGA-C8-A12Z-01A 29 13 In-Frame Intra-chr q13.13 Transcription factor q13.12 Seq+ 58156 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATF7IP-FAM83B ATF7IP chr12 14518761 - FAM83B chr6 54804504 + Exonic hg19 SARC TCGA-PC-A5DN-01A 45 29 5'UTR-CDS Inter-chr p13.1 p12.1 Seq+ 58157 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATF7IP-TMPRSS2 ATF7IP chr12 14610229 - TMPRSS2 chr21 42861520 - Exonic hg19 PRAD TCGA-EJ-7784-01A 78 72 In-Frame Inter-chr p13.1 q22.3 Seq+ 58158 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATF7IP-TXNRD1 ATF7IP chr12 14518761 - TXNRD1 chr12 104645305 + Exonic hg19 PRAD TCGA-YL-A9WL-01A 2 1 5'UTR-CDS Intra-chr p13.1 q23.3 Seq+ 58159 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATF7IP-VIPR2 ATF7IP chr12 14634119 - VIPR2 chr7 158824560 - Exonic hg19 STAD TCGA-BR-A4QI-01A 13 88 Out-of-frame Inter-chr p13.1 q36.3 Seq+ 58160 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG13-AMBRA1 ATG13 chr11 46671867 - AMBRA1 chr11 46570050 - Exonic hg19 LUSC TCGA-66-2771-01A 3 4 CDS-5'UTR Intra-chr p11.2 p11.2 Seq+ 58161 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG13-ELP4 ATG13 chr11 46639440 - ELP4 chr11 31804941 + Exonic hg19 LUAD TCGA-50-5941-01A 3 3 5'UTR-CDS Intra-chr p11.2 p13 Seq+ 58162 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG13-TSPAN18 ATG13 chr11 46639440 - TSPAN18 chr11 44881879 + Exonic hg19 BRCA TCGA-A8-A09D-01A 76 42 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 58163 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG14-C14orf33 ATG14 chr14 55862658 - C14orf33 chr14 56045455 - Exonic hg19 BRCA TCGA-E9-A1RH-01A 81 67 Out-of-frame Intra-chr q22.3 58164 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG14-FUT8 ATG14 chr14 55878320 - FUT8 chr14 66135961 + Exonic hg19 GBM TCGA-27-1835-01A 2 5 Out-of-frame Intra-chr q22.3 q23.3 Seq+ 58165 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG16L1-NGEF ATG16L1 chr2 234202003 - NGEF chr2 233785295 - Exonic hg19 LGG TCGA-E1-A7Z2-01A 2 6 Out-of-frame Intra-chr q37.1 Seq+ 58166 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG2A-C11orf48 ATG2A chr11 64663934 - C11orf48 chr11 62437275 - Exonic hg19 PRAD TCGA-2A-AAYF-01A 7 9 In-Frame Intra-chr q13.1 58167 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG2A-EFCAB6 ATG2A chr11 64680510 - EFCAB6 chr22 43936237 - Exonic hg19 KIRC TCGA-BP-4173-01A 6 6 In-Frame Inter-chr q13.1 q13.31 Seq+ 58168 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG2B-SLC22A17 ATG2B chr14 96782870 - SLC22A17 chr14 23816145 - Exonic hg19 BLCA TCGA-DK-A3IK-01A 30 15 Out-of-frame Intra-chr q32.2 q11.2 Seq+ 58169 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG2B-TDRD9 ATG2B chr14 96788877 - TDRD9 chr14 104441726 + Exonic hg19 SARC TCGA-DX-A8BG-01A 2 1 In-Frame Intra-chr q32.2 q32.33 58170 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG4B-DTYMK ATG4B chr2 242590750 - DTYMK chr2 242615652 - Exonic hg19 GBM TCGA-32-2615-01A 28 68 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 58171 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG4C-C18orf42 ATG4C chr1 63249896 - C18orf42 chr18 5145754 - Exonic hg19 PRAD TCGA-KC-A7FA-01A 2 2 5'UTR-CDS Inter-chr p31.3 58172 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG4C-INADL ATG4C chr1 63249944 - INADL chr1 62545122 + Exonic hg19 LGG TCGA-DU-7010-01A 13 6 5'UTR-CDS Intra-chr p31.3 58173 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG4C-LEPR ATG4C chr1 63307218 - LEPR chr1 66098835 + Exonic hg19 PRAD TCGA-G9-6342-01A 8 8 In-Frame Intra-chr p31.3 p31.3 Seq+ 58174 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG4C-NFIA ATG4C chr1 63270926 - NFIA chr1 61798184 + Exonic hg19 OV TCGA-20-1684-01A 3 1 In-Frame Intra-chr p31.3 p31.3 Transcription factor Seq+ 58175 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG4D-UHRF1 ATG4D chr19 10655001 - UHRF1 chr19 4929234 + Exonic hg19 OV TCGA-13-1407-01A 2 3 In-Frame Intra-chr p13.2 p13.3 Seq+ 58176 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG5-CEACAM16 ATG5 chr6 106763976 - CEACAM16 chr19 45206619 + Exonic hg19 LGG TCGA-DU-7010-01A 43 9 Out-of-frame Inter-chr q21 q13.31 Seq+ 58177 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG5-EPHA7 ATG5 chr6 106756239 - EPHA7 chr6 93982140 - Exonic hg19 LUSC TCGA-98-A53B-01A 70 7 Out-of-frame Intra-chr q21 q16.1 Oncogene Seq+ 58178 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG5-GPR126 ATG5 chr6 106756239 - GPR126 chr6 142736106 + Exonic hg19 COAD TCGA-AY-6196-01A 4 3 Out-of-frame Intra-chr q21 Seq+ 58179 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG5-MLLT4 ATG5 chr6 106649847 - MLLT4 chr6 168265231 + Exonic hg19 UCS TCGA-NA-A4R1-01A 5 2 Out-of-frame Intra-chr q21 58180 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG5-NTM ATG5 chr6 106696025 - NTM chr11 131781458 + Exonic hg19 LUSC TCGA-77-A5G6-01A 26 37 Out-of-frame Inter-chr q21 q25 Seq+ 58181 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG5-PDSS2 ATG5 chr6 106649847 - PDSS2 chr6 107475981 - Exonic hg19 GBM TCGA-06-1804-01A 3 3 Out-of-frame Intra-chr q21 q21 Tumor suppressor gene Seq+ 58182 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG5-QRSL1 ATG5 chr6 106727536 - QRSL1 chr6 107113657 + Exonic hg19 BRCA TCGA-AN-A04C-01A 55 26 In-Frame Intra-chr q21 q21 Seq+ 58183 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG5-SYNJ2 ATG5 chr6 106763976 - SYNJ2 chr6 158502141 + Exonic hg19 LUSC TCGA-66-2788-01A 24 8 Out-of-frame Intra-chr q21 q25.3 Seq+ 58184 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG5-TMEM200A ATG5 chr6 106773401 - TMEM200A chr6 130706318 + Exonic hg19 BRCA TCGA-AR-A1AU-01A 19 8 5'UTR-5'UTR Intra-chr q21 q23.1 Seq+ 58185 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG7-ARMC3 ATG7 chr3 11406208 - ARMC3 chr10 23319525 + Exonic hg19 LUSC TCGA-43-8116-01A 6 4 Out-of-frame Inter-chr p25.3 p12.2 Seq+ 58186 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG7-BRAF ATG7 chr3 11468400 - BRAF chr7 140487384 - Exonic hg19 SKCM TCGA-BF-A5EP-01A 7 2 In-Frame Inter-chr p25.3 q34 TKL:RAF Oncogene Seq+ 58187 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG7-FHIT ATG7 chr3 11406208 - FHIT chr3 59908140 - Exonic hg19 BLCA TCGA-XF-A9SK-01A 2 1 In-Frame Intra-chr p25.3 p14.2 Tumor suppressor gene 58188 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG7-PPARG ATG7 chr3 11468400 - PPARG chr3 12475397 + Exonic hg19 LGG TCGA-DU-5871-01A 4 1 Out-of-frame Intra-chr p25.3 p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 58189 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG7-RSPH3 ATG7 chr3 11340890 - RSPH3 chr6 159404839 - Exonic hg19 LUSC TCGA-98-A53B-01A 6 4 Out-of-frame Inter-chr p25.3 q25.3 Seq+ 58190 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATG7-TBC1D5 ATG7 chr3 11421526 - TBC1D5 chr3 17209320 - Exonic hg19 STAD TCGA-CG-4304-01A 2 3 Out-of-frame Intra-chr p25.3 p24.3 58191 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATL2-DHX57 ATL2 chr2 38604285 - DHX57 chr2 39030057 - Exonic hg19 BRCA TCGA-E2-A14N-01A 8 5 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 58192 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATL2-DHX57 ATL2 chr2 38604285 - DHX57 chr2 39075544 - Exonic hg19 BRCA TCGA-GI-A2C9-01A 2 2 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 58193 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATL2-HNRPLL ATL2 chr2 38604285 - HNRPLL chr2 38800569 - Exonic hg19 LUAD TCGA-75-6211-01A 2 1 In-Frame Intra-chr p22.1 Seq+ 58194 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATL2-HNRPLL ATL2 chr2 38604285 - HNRPLL chr2 38800569 - Exonic hg19 BRCA TCGA-A8-A07R-01A 255 238 In-Frame Intra-chr p22.1 Seq+ 58195 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATL2-MAP4K4 ATL2 chr2 38604285 - MAP4K4 chr2 102483674 + Exonic hg19 UCEC TCGA-A5-A2K2-01A 3 1 In-Frame Intra-chr p22.1 q11.2 58196 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATL3-RTN3 ATL3 chr11 63426233 - RTN3 chr11 63517463 + Exonic hg19 LIHC TCGA-BC-A8YO-01A 11 7 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 58197 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATL3-ZDHHC14 ATL3 chr11 63438762 - ZDHHC14 chr6 158068291 + Exonic hg19 SKCM TCGA-BF-A1Q0-01A 61 47 Out-of-frame Inter-chr q13.1 q25.3 Seq+ 58198 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATM-CARD18 ATM chr11 108218092 - CARD18 chr11 105009805 - Exonic hg19 PRAD TCGA-KK-A6E8-01A 14 2 In-Frame Intra-chr q22.3 Atypical:PIKK Oncogene Tumor suppressor gene q22.3 Seq+ 58199 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATMIN-GPR19 ATMIN chr16 81069811 - GPR19 chr12 12848445 - Exonic hg19 PRAD TCGA-HC-7749-01A 12 9 CDS-5'UTR Inter-chr q23.2 Tumor suppressor gene Transcription factor p13.1 Seq+ 58200 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATN1-ENO2 ATN1 chr12 7037547 - ENO2 chr12 7024985 + Exonic hg19 LIHC TCGA-BC-A217-01A 14 17 5'UTR-5'UTR Intra-chr p13.31 p13.31 Seq+ 58201 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATN1-SUPT16H ATN1 chr12 7051482 - SUPT16H chr14 21829491 - Exonic hg19 LUAD TCGA-44-5643-01A 2 2 Out-of-frame Inter-chr p13.31 q11.2 58202 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATOH8-GNLY ATOH8 chr2 85991305 - GNLY chr2 85922443 + Exonic hg19 LUAD TCGA-69-7978-01A 4 6 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 58203 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATOH8-GNLY ATOH8 chr2 85982080 - GNLY chr2 85922443 + Exonic hg19 LUAD TCGA-86-8673-01A 5 7 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 58204 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATOH8-LYG2 ATOH8 chr2 85991305 - LYG2 chr2 99863283 - Exonic hg19 LIHC TCGA-BC-A216-01A 2 2 Out-of-frame Intra-chr p11.2 Transcription factor q11.2 Seq+ 58205 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP10D-FAM133A ATP10D chr4 47538955 - FAM133A chrX 92953396 + Exonic hg19 SKCM TCGA-HR-A2OH-01A 4 2 CDS-5'UTR Inter-chr p12 q21.32 58206 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP10D-FAM133A ATP10D chr4 47538955 - FAM133A chrX 92953396 + Exonic hg19 SKCM TCGA-HR-A2OH-06A 4 2 CDS-5'UTR Inter-chr p12 q21.32 58207 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP10D-GABRA2 ATP10D chr4 47527659 - GABRA2 chr4 46252621 - Exonic hg19 LUSC TCGA-O2-A52V-01A 53 35 Out-of-frame Intra-chr p12 p12 Seq+ 58208 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP10D-GABRB1 ATP10D chr4 47487536 - GABRB1 chr4 47033931 + Exonic hg19 HNSC TCGA-CV-6948-01A 2 3 5'UTR-CDS Intra-chr p12 p12 Seq+ 58209 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP11A-ADPRHL1 ATP11A chr13 113439571 - ADPRHL1 chr13 114088182 - Exonic hg19 SARC TCGA-KF-A41W-01A 14 6 Out-of-frame Intra-chr q34 q34 58210 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP11A-C13orf35 ATP11A chr13 113439571 - C13orf35 chr13 113337588 + Exonic hg19 LUAD TCGA-44-2655-01A 3 5 Out-of-frame Intra-chr q34 Seq+ 58211 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP11A-C13orf35 ATP11A chr13 113344769 - C13orf35 chr13 113337588 + Exonic hg19 KIRC TCGA-BP-5173-01A 2 2 Out-of-frame Intra-chr q34 Seq+ 58212 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP11A-C13orf35 ATP11A chr13 113439571 - C13orf35 chr13 113337588 + Exonic hg19 LUAD TCGA-MN-A4N1-01A 9 8 Out-of-frame Intra-chr q34 Seq+ 58213 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP11A-CARKD ATP11A chr13 113344769 - CARKD chr13 111274563 + Exonic hg19 HNSC TCGA-QK-A8ZA-01A 12 19 Out-of-frame Intra-chr q34 Seq+ 58214 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP11A-COL14A1 ATP11A chr13 113344769 - COL14A1 chr8 121160045 + Exonic hg19 MESO TCGA-3U-A98D-01A 9 13 CDS-5'UTR Inter-chr q34 q24.12 Seq+ 58215 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP11A-CYHR1 ATP11A chr13 113530255 - CYHR1 chr8 145678843 - Exonic hg19 COAD TCGA-A6-5656-01A 2 1 In-Frame Inter-chr q34 q24.3 58216 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP11A-DHRS12 ATP11A chr13 113516889 - DHRS12 chr13 52365393 - Exonic hg19 PRAD TCGA-YL-A8SQ-01B 8 6 In-Frame Intra-chr q34 q14.3 Seq+ 58217 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP11A-SPACA7 ATP11A chr13 113490565 - SPACA7 chr13 113086758 + Exonic hg19 BLCA TCGA-G2-AA3D-01A 3 5 In-Frame Intra-chr q34 58218 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP11A-SPACA7 ATP11A chr13 113490565 - SPACA7 chr13 113086758 + Exonic hg19 PAAD TCGA-US-A774-01A 2 4 In-Frame Intra-chr q34 58219 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP11A-TUBGCP3 ATP11A chr13 113490565 - TUBGCP3 chr13 113209319 - Exonic hg19 BRCA TCGA-D8-A143-01A 3 3 In-Frame Intra-chr q34 Seq+ 58220 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP11A-ULK4 ATP11A chr13 113530255 - ULK4 chr3 41831335 - Exonic hg19 STAD TCGA-BR-A4CR-01A 3 37 In-Frame Inter-chr q34 p22.1 Other:ULK Seq+ 58221 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP11B-CARS ATP11B chr3 182563310 - CARS chr11 3026663 - Exonic hg19 PRAD TCGA-EJ-5507-01A 277 126 In-Frame Inter-chr q26.33 Oncogene Seq+ 58222 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP11B-CCDC39 ATP11B chr3 182577147 - CCDC39 chr3 180499912 - Exonic hg19 SARC TCGA-IE-A3OV-01A 12 8 Out-of-frame Intra-chr q26.33 Oncogene q26.33 Seq+ 58223 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP11B-FXR1 ATP11B chr3 182511574 - FXR1 chr3 180685839 + Exonic hg19 LUSC TCGA-56-7823-01B 24 8 Out-of-frame Intra-chr q26.33 Oncogene q26.33 Seq+ 58224 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP11B-HECW1 ATP11B chr3 182559910 - HECW1 chr7 43546736 + Exonic hg19 PRAD TCGA-XJ-A9DX-01A 9 10 Out-of-frame Inter-chr q26.33 Oncogene p14.1 Seq+ 58225 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP11B-MAP3K13 ATP11B chr3 182545997 - MAP3K13 chr3 185146285 + Exonic hg19 CESC TCGA-DS-A1OC-01A 6 3 CDS-5'UTR Intra-chr q26.33 Oncogene q27.2 Seq+ 58226 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP11B-MCF2L2 ATP11B chr3 182631782 - MCF2L2 chr3 182994745 - Exonic hg19 LUSC TCGA-56-A4BY-01A 9 8 Out-of-frame Intra-chr q26.33 Oncogene q27.1 Seq+ 58227 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP11B-MED10 ATP11B chr3 182538164 - MED10 chr5 6372714 - Exonic hg19 BRCA TCGA-E2-A1LI-01A 13 5 In-Frame Inter-chr q26.33 Oncogene p15.31 Seq+ 58228 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP11B-NET1 ATP11B chr3 182616560 - NET1 chr10 5493793 + Exonic hg19 BLCA TCGA-XF-AAN4-01A 4 11 In-Frame Inter-chr q26.33 Oncogene p15.1 Seq+ 58229 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP11B-TFRC ATP11B chr3 182587119 - TFRC chr3 195785503 - Exonic hg19 HNSC TCGA-CV-6937-01A 22 9 In-Frame Intra-chr q26.33 Oncogene q29 Seq+ 58230 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP11B-TPRG1 ATP11B chr3 182566345 - TPRG1 chr3 188741539 + Exonic hg19 LUSC TCGA-63-A5MV-01A 9 14 Out-of-frame Intra-chr q26.33 Oncogene q28 Seq+ 58231 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP11C-CXorf66 ATP11C chrX 139014175 - CXorf66 chrX 139040376 - Exonic hg19 LIHC TCGA-DD-AAD1-01A 7 4 5'UTR-CDS Intra-chr q27.1 q27.1 Seq+ 58232 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP11C-PREX1 ATP11C chrX 139014175 - PREX1 chr20 47309328 - Exonic hg19 BRCA TCGA-E2-A1II-01A 3 3 5'UTR-CDS Inter-chr q27.1 q13.13 Seq+ 58233 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP13A3-DNAJC13 ATP13A3 chr3 194206523 - DNAJC13 chr3 132219638 + Exonic hg19 COAD TCGA-D5-5540-01A 15 21 5'UTR-CDS Intra-chr q29 q22.1 Seq+ 58234 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP13A4-NAALADL2 ATP13A4 chr3 193272529 - NAALADL2 chr3 174814580 + Exonic hg19 LUSC TCGA-60-2711-01A 3 1 Out-of-frame Intra-chr q29 q26.31 58235 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP1A1-DDX21 ATP1A1 chr1 116947394 - DDX21 chr10 70723858 + Exonic hg19 STAD TCGA-BR-8682-01A 2 10 Out-of-frame Inter-chr p13.1 q22.1 58236 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP1A1-DDX21 ATP1A1 chr1 116947394 - DDX21 chr10 70723858 + Exonic hg19 COAD TCGA-CK-4952-01A 2 8 Out-of-frame Inter-chr p13.1 q22.1 58237 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP1A1-FN1 ATP1A1 chr1 116947396 - FN1 chr2 216274837 - Exonic hg19 PRAD TCGA-HC-7737-01A 2 12 3'UTR-CDS Inter-chr p13.1 q35 Oncogene 58238 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP1A1-IGSF3 ATP1A1 chr1 116946597 - IGSF3 chr1 117122499 - Exonic hg19 STAD TCGA-BR-8289-01A 8 53 In-Frame Intra-chr p13.1 p13.1 Seq+ 58239 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP1A1-NOTCH2 ATP1A1 chr1 116926746 - NOTCH2 chr1 120465401 - Exonic hg19 BRCA TCGA-A2-A0ST-01A 19 9 Out-of-frame Intra-chr p13.1 p12 Oncogene Tumor suppressor gene Seq+ 58240 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP1A1-RABEP1 ATP1A1 chr1 116947394 - RABEP1 chr17 5283828 + Exonic hg19 BRCA TCGA-AR-A1AM-01A 2 11 Out-of-frame Inter-chr p13.1 p13.2 58241 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP1A1-VANGL1 ATP1A1 chr1 116916145 - VANGL1 chr1 116206282 + Exonic hg19 BRCA TCGA-E2-A15A-01A 10 9 In-Frame Intra-chr p13.1 p13.1 Seq+ 58242 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP1B1-IL26 ATP1B1 chr1 169080736 - IL26 chr12 68619063 - Exonic hg19 SARC TCGA-DX-A1KU-01A 4 2 Out-of-frame Inter-chr q24.2 q15 Seq+ 58243 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP1B1-NRG1 ATP1B1 chr1 169080736 - NRG1 chr8 32453346 + Exonic hg19 PAAD TCGA-3A-A9I5-01A 58 62 In-Frame Inter-chr q24.2 p12 KB Pub Seq+ 58244 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP1B1-RCSD1 ATP1B1 chr1 169099328 - RCSD1 chr1 167653137 + Exonic hg19 LUAD TCGA-86-8281-01A 285 277 In-Frame Intra-chr q24.2 q24.2 Seq+ 58245 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP1B1-SIAE ATP1B1 chr1 169101960 - SIAE chr11 124543777 - Exonic hg19 LUAD TCGA-44-2656-01A 2 1 3'UTR-5'UTR Inter-chr q24.2 q24.2 58246 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP1B1-THSD4 ATP1B1 chr1 169101960 - THSD4 chr15 72072881 + Exonic hg19 LIHC TCGA-DD-A4NA-01A 2 1 Out-of-frame Inter-chr q24.2 q23 58247 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP1B2-SLC37A3 ATP1B2 chr17 7554948 - SLC37A3 chr7 140037149 - Exonic hg19 SARC TCGA-DX-A8BM-01A 7 5 In-Frame Inter-chr p13.1 q34 Seq+ 58248 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP1B3-RNF7 ATP1B3 chr3 141595752 - RNF7 chr3 141464001 + Exonic hg19 LUSC TCGA-21-1082-01A 9 13 In-Frame Intra-chr q23 q23 Seq+ 58249 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2A1-ATXN2L ATP2A1 chr16 28912237 - ATXN2L chr16 28846379 + Exonic hg19 CESC TCGA-HM-A6W2-06A 4 3 In-Frame Intra-chr p11.2 p11.2 Seq+ 58250 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2A2-C12orf49 ATP2A2 chr12 110734542 - C12orf49 chr12 117161028 - Exonic hg19 LUAD TCGA-44-6779-01A 3 1 Out-of-frame Intra-chr q24.11 q24.22 58251 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2A2-COL2A1 ATP2A2 chr12 110771948 - COL2A1 chr12 48378382 - Exonic hg19 SARC TCGA-3B-A9HL-01A 5 5 In-Frame Intra-chr q24.11 q13.11 Seq+ 58252 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2A2-EP400 ATP2A2 chr12 110729929 - EP400 chr12 132464242 + Exonic hg19 LUSC TCGA-34-5232-01A 9 6 Out-of-frame Intra-chr q24.11 q24.33 Oncogene Seq+ 58253 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2A2-IFT81 ATP2A2 chr12 110734542 - IFT81 chr12 110600724 + Exonic hg19 LUAD TCGA-49-6742-01A 11 2 Out-of-frame Intra-chr q24.11 q24.11 Seq+ 58254 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2A2-IFT81 ATP2A2 chr12 110720600 - IFT81 chr12 110628725 + Exonic hg19 LUAD TCGA-78-7161-01A 150 90 In-Frame Intra-chr q24.11 q24.11 Seq+ 58255 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2A2-IFT81 ATP2A2 chr12 110765822 - IFT81 chr12 110600724 + Exonic hg19 UCEC TCGA-AX-A2H4-01A 2 2 In-Frame Intra-chr q24.11 q24.11 Seq+ 58256 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2A2-IFT81 ATP2A2 chr12 110734542 - IFT81 chr12 110584758 + Exonic hg19 LIHC TCGA-BC-A10R-01A 3 3 Out-of-frame Intra-chr q24.11 q24.11 Seq+ 58257 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2A3-FGF3 ATP2A3 chr17 3832622 - FGF3 chr11 69625468 - Exonic hg19 BRCA TCGA-A2-A0CT-01A 64 56 In-Frame Inter-chr p13.2 q13.3 Seq+ 58258 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2B1-C8orf34 ATP2B1 chr12 90102996 - C8orf34 chr8 69621229 + Exonic hg19 SARC TCGA-3B-A9HO-01A 16 24 5'UTR-CDS Inter-chr q21.33 q13.2 Seq+ 58259 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2B1-CEP290 ATP2B1 chr12 90010579 - CEP290 chr12 88478629 - Exonic hg19 CESC TCGA-C5-A7CH-01A 5 3 In-Frame Intra-chr q21.33 q21.32 Seq+ 58260 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2B1-CORO1C ATP2B1 chr12 90102996 - CORO1C chr12 109095099 - Exonic hg19 SARC TCGA-3B-A9HO-01A 7 2 5'UTR-5'UTR Intra-chr q21.33 q24.11 58261 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2B1-DCDC2 ATP2B1 chr12 90102996 - DCDC2 chr6 24302272 - Exonic hg19 SARC TCGA-DX-A3U5-01A 19 6 5'UTR-CDS Inter-chr q21.33 p22.3 Tumor suppressor gene Seq+ 58262 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2B1-EXOC4 ATP2B1 chr12 90049456 - EXOC4 chr7 133749044 + Exonic hg19 SARC TCGA-DX-A3LS-01A 3 4 Out-of-frame Inter-chr q21.33 q33 Seq+ 58263 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2B1-GRIP1 ATP2B1 chr12 89996820 - GRIP1 chr12 66935730 - Exonic hg19 SARC TCGA-DX-AB2G-01A 5 1 Out-of-frame Intra-chr q21.33 q14.3 Seq+ 58264 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2B1-IKBIP ATP2B1 chr12 90024282 - IKBIP chr12 99028191 - Exonic hg19 BRCA TCGA-A2-A0CZ-01A 3 1 Out-of-frame Intra-chr q21.33 q23.1 58265 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2B1-KCNC2 ATP2B1 chr12 90004970 - KCNC2 chr12 75442097 - Exonic hg19 BRCA TCGA-E9-A5UO-01A 22 12 Out-of-frame Intra-chr q21.33 q21.1 Seq+ 58266 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2B1-LIN7A ATP2B1 chr12 90003714 - LIN7A chr12 81283148 - Exonic hg19 SARC TCGA-3B-A9HO-01A 2 5 Out-of-frame Intra-chr q21.33 q21.31 58267 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2B1-RBM19 ATP2B1 chr12 90102996 - RBM19 chr12 114282593 - Exonic hg19 SARC TCGA-3B-A9HO-01A 31 25 5'UTR-CDS Intra-chr q21.33 q24.21 58268 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2B1-YAF2 ATP2B1 chr12 90021455 - YAF2 chr12 42593037 - Exonic hg19 TGCT TCGA-2G-AAGG-01A 17 18 CDS-3'UTR Intra-chr q21.33 q12 Seq+ 58269 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2B4-ERBB4 ATP2B4 chr1 203596347 - ERBB4 chr2 212989628 - Exonic hg19 LUAD TCGA-05-4398-01A 16 5 5'UTR-CDS Inter-chr q32.1 q34 Oncogene Tumor suppressor gene Seq+ 58270 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2B4-NFASC ATP2B4 chr1 203596347 - NFASC chr1 204889760 + Exonic hg19 GBM TCGA-06-5411-01A 3 7 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 58271 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2B4-OPTC ATP2B4 chr1 203683405 - OPTC chr1 203472042 + Exonic hg19 SARC TCGA-DX-AB32-01A 5 5 In-Frame Intra-chr q32.1 q32.1 Seq+ 58272 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2B4-PRELP ATP2B4 chr1 203596347 - PRELP chr1 203452297 + Exonic hg19 UCEC TCGA-EY-A3QX-01A 11 9 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 58273 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2B4-RP11-352D3.2 ATP2B4 chr1 203596347 - RP11-352D3.2 chr20 4053311 - Exonic hg19 STAD TCGA-BR-8289-01A 6 12 Out-of-frame Inter-chr q32.1 58274 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2B4-TFEB ATP2B4 chr1 203696699 - TFEB chr6 41658973 - Exonic hg19 UCEC TCGA-AX-A3G7-01A 2 9 CDS-5'UTR Inter-chr q32.1 p21.1 Transcription factor Seq+ 58275 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2C1-C18orf45 ATP2C1 chr3 130660543 - C18orf45 chr18 20889708 - Exonic hg19 SARC TCGA-3B-A9HS-01A 5 9 Out-of-frame Inter-chr q22.1 58276 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2C1-COL6A6 ATP2C1 chr3 130649370 - COL6A6 chr3 130394046 + Exonic hg19 LUSC TCGA-52-7812-01A 40 29 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 58277 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2C1-CPNE4 ATP2C1 chr3 130675023 - CPNE4 chr3 131759165 - Exonic hg19 PRAD TCGA-V1-A9O9-01A 8 4 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 58278 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2C1-MBNL1 ATP2C1 chr3 130613619 - MBNL1 chr3 152132730 + Exonic hg19 LUSC TCGA-56-8622-01A 9 7 In-Frame Intra-chr q22.1 q25.1 Seq+ 58279 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2C2-WFDC1 ATP2C2 chr16 84402320 - WFDC1 chr16 84358025 + Exonic hg19 LUSC TCGA-94-8491-01A 4 4 Out-of-frame Intra-chr q24.1 q24.1 Tumor suppressor gene 58280 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP2C2-ZNF423 ATP2C2 chr16 84402320 - ZNF423 chr16 49823457 - Exonic hg19 LGG TCGA-E1-A7Z2-01A 2 1 Out-of-frame Intra-chr q24.1 q12.1 Transcription factor 58281 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP5A1-HAUS1 ATP5A1 chr18 43684103 - HAUS1 chr18 43698147 + Exonic hg19 COAD TCGA-CM-5348-01A 11 4 5'UTR-5'UTR Intra-chr q21.1 q21.1 Seq+ 58282 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP5B-ANKS1A ATP5B chr12 57031959 - ANKS1A chr6 34977682 + Exonic hg19 BRCA TCGA-AO-A03L-01A 2 1 3'UTR-CDS Inter-chr q13.3 p21.31 58283 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP5B-THSD4 ATP5B chr12 57031959 - THSD4 chr15 72072881 + Exonic hg19 PRAD TCGA-G9-6356-01A 2 2 3'UTR-3'UTR Inter-chr q13.3 q23 58284 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP5H-HN1 ATP5H chr17 73038276 - HN1 chr17 73142779 - Exonic hg19 BLCA TCGA-E7-A5KE-01A 126 71 In-Frame Intra-chr q25.1 Seq+ 58285 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP5L-AHCYL2 ATP5L chr11 118272432 - AHCYL2 chr7 129019482 + Exonic hg19 SKCM TCGA-EE-A2MF-06A 145 80 Out-of-frame Inter-chr q23.3 q32.1 Seq+ 58286 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP5L-UBE4A ATP5L chr11 118277812 - UBE4A chr11 118267029 + Exonic hg19 LUSC TCGA-LA-A7SW-01A 15 27 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 58287 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP6AP1-ARFGEF2 ATP6AP1 chrX 153664862 - ARFGEF2 chr20 47615777 + Exonic hg19 BLCA TCGA-DK-A3X2-01A 2 1 Out-of-frame Inter-chr q28 q13.13 58288 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP6AP1-CCT5 ATP6AP1 chrX 153664862 - CCT5 chr5 10250033 + Exonic hg19 PRAD TCGA-V1-A9O5-01A 2 1 Out-of-frame Inter-chr q28 p15.2 58289 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP6AP1-OPN1LW ATP6AP1 chrX 153657520 - OPN1LW chrX 153421769 + Exonic hg19 BLCA TCGA-FD-A62P-01A 10 4 In-Frame Intra-chr q28 q28 Seq+ 58290 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP6AP2-EIF3M ATP6AP2 chrX 40465889 - EIF3M chr11 32611132 + Exonic hg19 PRAD TCGA-G9-6348-01A 2 3 3'UTR-CDS Inter-chr p11.4 p13 58291 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP6V0A1-ATF6 ATP6V0A1 chr17 40613029 - ATF6 chr1 161832988 + Exonic hg19 BRCA TCGA-B6-A0I1-01A 9 6 Out-of-frame Inter-chr q21.2 q23.3 Transcription factor Seq+ 58292 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP6V0A1-MB ATP6V0A1 chr17 40622236 - MB chr22 36033255 - Exonic hg19 GBM TCGA-14-0787-01A 10 12 Out-of-frame Inter-chr q21.2 q12.3 Seq+ 58293 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP6V0A1-MSI2 ATP6V0A1 chr17 40635149 - MSI2 chr17 55607037 + Exonic hg19 BRCA TCGA-EW-A1J1-01A 34 32 In-Frame Intra-chr q21.2 q22 Seq+ 58294 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP6V0A1-STAT5A ATP6V0A1 chr17 40610981 - STAT5A chr17 40440074 + Exonic hg19 BLCA TCGA-BT-A20U-01A 18 29 5'UTR-5'UTR Intra-chr q21.2 q21.2 Tumor suppressor gene Transcription factor Seq+ 58295 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP6V0A1-STAT5B ATP6V0A1 chr17 40610981 - STAT5B chr17 40384155 - Exonic hg19 SKCM TCGA-YG-AA3P-06A 3 6 5'UTR-5'UTR Intra-chr q21.2 q21.2 Transcription factor Seq+ 58296 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP6V0A4-TM4SF20 ATP6V0A4 chr7 138406642 - TM4SF20 chr2 228235696 - Exonic hg19 UCS TCGA-N8-A56S-01A 3 5 In-Frame Inter-chr q34 q36.3 Seq+ 58297 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP6V0D1-CFDP1 ATP6V0D1 chr16 67514860 - CFDP1 chr16 75339080 - Exonic hg19 MESO TCGA-YS-AA4M-01A 8 2 Out-of-frame Intra-chr q22.1 q23.1 58298 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP6V0D1-DUS2L ATP6V0D1 chr16 67514860 - DUS2L chr16 68104037 + Exonic hg19 SKCM TCGA-EB-A3Y7-01A 85 26 Out-of-frame Intra-chr q22.1 Seq+ 58299 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP6V0E1-ERGIC1 ATP6V0E1 chr5 172410967 - ERGIC1 chr5 172315702 + Exonic hg19 ESCA TCGA-L5-A8NE-01A 10 138 In-Frame Intra-chr q35.1 q35.1 Seq+ 58300 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP6V1A-OPA1 ATP6V1A chr3 113465960 - OPA1 chr3 193349401 + Exonic hg19 BRCA TCGA-A8-A06U-01A 20 17 5'UTR-CDS Intra-chr q13.31 q29 Seq+ 58301 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP6V1B2-KHDRBS2 ATP6V1B2 chr8 20070416 - KHDRBS2 chr6 62611276 - Exonic hg19 LGG TCGA-DU-A7TC-01A 9 8 In-Frame Inter-chr p21.3 q11.1 Seq+ 58302 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP6V1C1-KB-1507C5.2 ATP6V1C1 chr8 104033453 - KB-1507C5.2 chr8 103892123 + Exonic hg19 LIHC TCGA-RC-A6M6-01A 48 14 Out-of-frame Intra-chr q22.3 58303 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP6V1D-CBS ATP6V1D chr14 67804788 - CBS chr21 44476011 - Exonic hg19 PRAD TCGA-G9-6371-01A 2 7 Out-of-frame Inter-chr q23.3 q22.3 58304 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP6V1D-ZFYVE26 ATP6V1D chr14 67826375 - ZFYVE26 chr14 68272335 - Exonic hg19 ESCA TCGA-L5-A4OM-01A 2 15 Out-of-frame Intra-chr q23.3 q24.1 Seq+ 58305 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP6V1E1-C22orf45 ATP6V1E1 chr22 18080960 - C22orf45 chr22 24838108 - Exonic hg19 PAAD TCGA-HZ-7919-01A 6 4 CDS-3'UTR Intra-chr q11.21 58306 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP6V1E2-GRIK1 ATP6V1E2 chr2 46762952 - GRIK1 chr21 31015289 - Exonic hg19 HNSC TCGA-CN-6992-01A 3 3 5'UTR-CDS Inter-chr p21 q21.3 58307 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP6V1F-C7orf58 ATP6V1F chr7 128503116 - C7orf58 chr7 120935494 + Exonic hg19 LUSC TCGA-39-5011-01A 102 71 Out-of-frame Intra-chr q32.1 Seq+ 58308 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP6V1H-RP1 ATP6V1H chr8 54656137 - RP1 chr8 55667363 + Exonic hg19 LUSC TCGA-66-2758-01A 2 1 CDS-3'UTR Intra-chr q11.23 q11.23 58309 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP6V1H-ST8SIA4 ATP6V1H chr8 54723724 - ST8SIA4 chr5 100231489 - Exonic hg19 BRCA TCGA-AC-A3OD-01B 3 1 Out-of-frame Inter-chr q11.23 q21.1 58310 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP7A-PTPRR ATP7A chrX 77166332 - PTPRR chr12 71033057 - Exonic hg19 SARC TCGA-DX-AB2F-01A 6 8 5'UTR-CDS Inter-chr q21.1 q15 Seq+ 58311 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP8A1-CRMP1 ATP8A1 chr4 42626553 - CRMP1 chr4 5844888 - Exonic hg19 OV TCGA-25-1324-01A 14 105 In-Frame Intra-chr p13 p16.2 Seq+ 58312 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP8A1-LDB2 ATP8A1 chr4 42658842 - LDB2 chr4 16760883 - Exonic hg19 KIRC TCGA-CW-5581-01A 6 5 Out-of-frame Intra-chr p13 p15.32 Seq+ 58313 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP8A1-PDS5A ATP8A1 chr4 42551030 - PDS5A chr4 39865079 - Exonic hg19 STAD TCGA-CD-8536-01A 7 18 In-Frame Intra-chr p13 p14 Seq+ 58314 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP8A2-ALG5 ATP8A2 chr13 26436546 - ALG5 chr13 37559877 - Exonic hg19 BLCA TCGA-DK-AA6P-01A 11 7 In-Frame Intra-chr q12.13 q13.3 Seq+ 58315 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP8A2-CRYL1 ATP8A2 chr13 26436546 - CRYL1 chr13 20987526 - Exonic hg19 OV TCGA-24-1550-01A 2 1 In-Frame Intra-chr q12.13 q12.11 Seq+ 58316 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP8B2-ADAR ATP8B2 chr1 154313538 - ADAR chr1 154569743 - Exonic hg19 PRAD TCGA-XJ-A9DX-01A 2 1 Out-of-frame Intra-chr q21.3 q21.3 58317 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP8B4-ATPBD4 ATP8B4 chr15 50330965 - ATPBD4 chr15 35674117 - Exonic hg19 BRCA TCGA-C8-A1HI-01A 2 4 Out-of-frame Intra-chr q21.2 58318 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP8B4-LINGO1 ATP8B4 chr15 50330965 - LINGO1 chr15 77908242 - Exonic hg19 SARC TCGA-FX-A3NK-01A 10 7 Out-of-frame Intra-chr q21.2 q24.3 Seq+ 58319 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP8B4-OCA2 ATP8B4 chr15 50168475 - OCA2 chr15 28327041 - Exonic hg19 PRAD TCGA-EJ-7330-01A 3 5 CDS-5'UTR Intra-chr q21.2 q13.1 Seq+ 58320 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP9A-EPB41L1 ATP9A chr20 50329505 - EPB41L1 chr20 34763473 + Exonic hg19 BLCA TCGA-XF-A8HD-01A 2 2 Out-of-frame Intra-chr q13.2 q11.23 58321 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP9A-MACROD2 ATP9A chr20 50255882 - MACROD2 chr20 15843390 + Exonic hg19 LUAD TCGA-86-8280-01A 6 4 In-Frame Intra-chr q13.2 p12.1 Seq+ 58322 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP9A-TRPC4AP ATP9A chr20 50384841 - TRPC4AP chr20 33623111 - Exonic hg19 PRAD TCGA-EJ-5514-01A 4 3 Out-of-frame Intra-chr q13.2 q11.22 Seq+ 58323 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP9A-WFDC8 ATP9A chr20 50286536 - WFDC8 chr20 44190858 - Exonic hg19 COAD TCGA-AD-6965-01A 7 5 Out-of-frame Intra-chr q13.2 q13.12 58324 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP9A-ZFP64 ATP9A chr20 50342358 - ZFP64 chr20 50715126 - Exonic hg19 UCS TCGA-NF-A5CP-01A 9 1 Out-of-frame Intra-chr q13.2 q13.2 Transcription factor 58325 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP9B-ATRX ATP9B chr18 76856649 - ATRX chrX 76909690 - Exonic hg19 SARC TCGA-DX-A1L0-01A 18 7 In-Frame Inter-chr q21.1 Oncogene Seq+ 58326 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATP9B-LUC7L ATP9B chr18 76953263 - LUC7L chr16 258187 - Exonic hg19 SARC TCGA-DX-A1L0-01A 28 9 In-Frame Inter-chr p13.3 Seq+ 58327 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATPAF1-OSBPL9 ATPAF1 chr1 47108866 - OSBPL9 chr1 52242505 + Exonic hg19 BLCA TCGA-CF-A1HS-01A 68 34 In-Frame Intra-chr p33 p32.3 Seq+ 58328 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATPBD4-COX5A ATPBD4 chr15 35703036 - COX5A chr15 75212783 - Exonic hg19 SARC TCGA-X6-A8C2-01A 8 4 CDS-3'UTR Intra-chr q24.2 58329 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATPBD4-SHC4 ATPBD4 chr15 35838320 - SHC4 chr15 49127219 - Exonic hg19 COAD TCGA-CM-5348-01A 2 22 Out-of-frame Intra-chr q21.1 58330 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATR-DBR1 ATR chr3 142297488 - DBR1 chr3 137892468 - Exonic hg19 BRCA TCGA-A2-A0CL-01A 2 3 3'UTR-CDS Intra-chr q23 Atypical:PIKK Oncogene Tumor suppressor gene q22.3 Seq+ 58331 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATR-R3HDM2 ATR chr3 142284963 - R3HDM2 chr12 57650294 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 3 8 3'UTR-CDS Inter-chr q23 Atypical:PIKK Oncogene Tumor suppressor gene q13.3 Seq+ 58332 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATRN-C20orf194 ATRN chr20 3452164 - C20orf194 chr20 3363153 - Exonic hg19 SARC TCGA-FX-A3NK-01A 6 5 In-Frame Intra-chr p13 p13 Seq+ 58333 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATRN-RNF24 ATRN chr20 3557644 - RNF24 chr20 3915720 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 48 39 Out-of-frame Intra-chr p13 p13 Seq+ 58334 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATRN-TNKS2 ATRN chr20 3565527 - TNKS2 chr10 93572740 + Exonic hg19 LUSC TCGA-56-8503-01A 22 6 In-Frame Inter-chr p13 q23.32 Seq+ 58335 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATRN-UQCRB ATRN chr20 3541552 - UQCRB chr8 97245455 - Exonic hg19 SARC TCGA-K1-A42X-01A 23 19 In-Frame Inter-chr p13 q22.1 Seq+ 58336 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATRN-UQCRB ATRN chr20 3541552 - UQCRB chr8 97245455 - Exonic hg19 SARC TCGA-K1-A42X-02A 31 17 In-Frame Inter-chr p13 q22.1 Seq+ 58337 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATRNL1-ATAD1 ATRNL1 chr10 117278834 - ATAD1 chr10 89574369 - Exonic hg19 BRCA TCGA-BH-A18K-01A 2 7 CDS-5'UTR Intra-chr q25.3 Seq+ 58338 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATRX-ABCB7 ATRX chrX 77041468 - ABCB7 chrX 74334669 - Exonic hg19 SARC TCGA-HB-A3YV-01A 7 2 Out-of-frame Intra-chr q21.1 Oncogene q13.3 Seq+ 58339 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATRX-ARHGEF9 ATRX chrX 77041468 - ARHGEF9 chrX 62875617 - Exonic hg19 MESO TCGA-MQ-A4LP-01A 48 24 Out-of-frame Intra-chr q21.1 Oncogene q11.2 Seq+ 58340 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATRX-BCL2 ATRX chrX 77041468 - BCL2 chr18 60795992 - Exonic hg19 LGG TCGA-DB-A4XF-01A 55 23 Out-of-frame Inter-chr q21.1 Oncogene q21.33 Oncogene Seq+ 58341 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATRX-EFCAB4B ATRX chrX 77041468 - EFCAB4B chr12 3822483 - Exonic hg19 SARC TCGA-DX-A8BK-01A 9 2 CDS-5'UTR Inter-chr q21.1 Oncogene 58342 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATRX-LPAR4 ATRX chrX 77041468 - LPAR4 chrX 78010288 + Exonic hg19 LUSC TCGA-77-A5GH-01A 4 1 CDS-5'UTR Intra-chr q21.1 Oncogene q21.1 Seq+ 58343 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATRX-MAGT1 ATRX chrX 76972608 - MAGT1 chrX 77112994 - Exonic hg19 SKCM TCGA-ER-A3ES-06A 2 2 Out-of-frame Intra-chr q21.1 Oncogene q21.1 58344 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATRX-SNTB2 ATRX chrX 76953071 - SNTB2 chr16 69304046 + Exonic hg19 SARC TCGA-VT-A80G-01A 7 8 Out-of-frame Inter-chr q21.1 Oncogene Seq+ 58345 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATRX-ZNF304 ATRX chrX 77041468 - ZNF304 chr19 57865093 + Exonic hg19 LGG TCGA-CS-6290-01A 42 13 Out-of-frame Inter-chr q21.1 Oncogene q13.43 Transcription factor Seq+ 58346 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATXN1-ARG1 ATXN1 chr6 16658007 - ARG1 chr6 131900251 + Exonic hg19 LUAD TCGA-55-6978-01A 40 8 5'UTR-CDS Intra-chr p22.3 q23.2 Tumor suppressor gene Seq+ 58347 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATXN1-CGA ATXN1 chr6 16658007 - CGA chr6 87797925 - Exonic hg19 LUAD TCGA-95-7039-01A 3 3 5'UTR-5'UTR Intra-chr p22.3 q14.3 Seq+ 58348 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATXN1-DNM3 ATXN1 chr6 16486203 - DNM3 chr1 172348158 + Exonic hg19 SARC TCGA-DX-A1L3-01A 62 53 5'UTR-CDS Inter-chr p22.3 q24.3 Seq+ 58349 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATXN1-DTNBP1 ATXN1 chr6 16486203 - DTNBP1 chr6 15533626 - Exonic hg19 LIHC TCGA-HP-A5N0-01A 3 31 5'UTR-CDS Intra-chr p22.3 p22.3 Seq+ 58350 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATXN1-HMGCLL1 ATXN1 chr6 16486203 - HMGCLL1 chr6 55406938 - Exonic hg19 BRCA TCGA-E9-A5UO-01A 17 7 5'UTR-CDS Intra-chr p22.3 p12.1 Seq+ 58351 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATXN1-PCTP ATXN1 chr6 16486203 - PCTP chr17 53844696 + Exonic hg19 BRCA TCGA-A8-A0AD-01A 27 23 5'UTR-5'UTR Inter-chr p22.3 q22 Seq+ 58352 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATXN1-SLC24A1 ATXN1 chr6 16486203 - SLC24A1 chr15 65911218 + Exonic hg19 SARC TCGA-DX-A1L3-01A 72 41 5'UTR-5'UTR Inter-chr p22.3 q22.31 Seq+ 58353 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATXN10-APPL1 ATXN10 chr22 46136418 - APPL1 chr3 57280104 + Exonic hg19 BRCA TCGA-BH-A0H7-01A 49 18 In-Frame Inter-chr q13.31 p14.3 Seq+ 58354 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATXN10-COL16A1 ATXN10 chr22 46068059 - COL16A1 chr1 32158110 - Exonic hg19 THYM TCGA-X7-A8D9-01A 14 11 Out-of-frame Inter-chr q13.31 p35.2 Seq+ 58355 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATXN10-FBLN1 ATXN10 chr22 46088958 - FBLN1 chr22 45996187 + Exonic hg19 OV TCGA-13-0795-01A 8 3 In-Frame Intra-chr q13.31 q13.31 Tumor suppressor gene Seq+ 58356 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATXN10-TBC1D22A ATXN10 chr22 46136418 - TBC1D22A chr22 47507404 + Exonic hg19 LIHC TCGA-2Y-A9HA-01A 13 7 In-Frame Intra-chr q13.31 q13.31 Seq+ 58357 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATXN2-ADAM10 ATXN2 chr12 111947353 - ADAM10 chr15 58974513 - Exonic hg19 PRAD TCGA-V1-A9ZG-01A 2 2 CDS-3'UTR Inter-chr q24.12 q21.3 58358 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATXN2-BRAP ATXN2 chr12 111947353 - BRAP chr12 112087846 - Exonic hg19 BLCA TCGA-G2-AA3D-01A 4 4 In-Frame Intra-chr q24.12 q24.12 Seq+ 58359 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATXN2-CCDC59 ATXN2 chr12 111990084 - CCDC59 chr12 82702094 - Exonic hg19 BRCA TCGA-AR-A1AP-01A 3 1 CDS-3'UTR Intra-chr q24.12 q21.31 Seq+ 58360 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATXN2-GIT2 ATXN2 chr12 111990084 - GIT2 chr12 110405308 - Exonic hg19 BRCA TCGA-C8-A132-01A 12 21 In-Frame Intra-chr q24.12 q24.11 Seq+ 58361 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATXN2-RPL6 ATXN2 chr12 112036588 - RPL6 chr12 112849246 - Exonic hg19 GBM TCGA-06-0747-01A 3 2 CDS-5'UTR Intra-chr q24.12 q24.13 Seq+ 58362 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATXN2-TRIM37 ATXN2 chr12 111923075 - TRIM37 chr17 57079075 - Exonic hg19 PRAD TCGA-G9-6354-01A 23 10 In-Frame Inter-chr q24.12 q22 Seq+ 58363 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATXN7-SLC25A26 ATXN7 chr3 63938159 - SLC25A26 chr3 66271168 + Exonic hg19 SKCM TCGA-FS-A1ZZ-06A 10 5 5'UTR-5'UTR Intra-chr p14.1 Seq+ 58364 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATXN7-SLC25A26 ATXN7 chr3 63938159 - SLC25A26 chr3 66293627 + Exonic hg19 UCS TCGA-NA-A4QW-01A 62 25 In-Frame Intra-chr p14.1 Seq+ 58365 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATXN7-ZNF385D ATXN7 chr3 63965843 - ZNF385D chr3 21478695 - Exonic hg19 STAD TCGA-R5-A7O7-01A 3 28 Out-of-frame Intra-chr p14.1 p24.3 Transcription factor Seq+ 58366 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ATXN7L1-AGBL3 ATXN7L1 chr7 105516258 - AGBL3 chr7 134819593 + Exonic hg19 LUAD TCGA-44-A479-01A 14 16 Out-of-frame Intra-chr q22.3 q33 Seq+ 58367 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AUH-CPM AUH chr9 94058303 - CPM chr12 69265736 - Exonic hg19 SARC TCGA-DX-A3M1-01A 3 3 Out-of-frame Inter-chr q22.31 q15 Seq+ 58368 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AURKA-PCK1 AURKA chr20 54963212 - PCK1 chr20 56136428 + Exonic hg19 BRCA TCGA-AR-A24R-01A 19 9 CDS-5'UTR Intra-chr q13.2 Oncogene q13.31 Seq+ 58369 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AURKB-MYH10 AURKB chr17 8113848 - MYH10 chr17 8452105 - Exonic hg19 BRCA TCGA-BH-A1F6-01A 2 7 5'UTR-CDS Intra-chr p13.1 Oncogene p13.1 Seq+ 58370 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AUTS2-ACTR1A AUTS2 chr7 69364484 - ACTR1A chr10 104250370 - Exonic hg19 SARC TCGA-LI-A67I-01A 8 8 In-Frame Inter-chr q11.22 q24.32 Seq+ 58371 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AUTS2-PNLIPRP3 AUTS2 chr7 69364484 - PNLIPRP3 chr10 118215234 + Exonic hg19 OV TCGA-13-0916-01A 2 3 In-Frame Inter-chr q11.22 q25.3 Seq+ 58372 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AUTS2-SEMA3A AUTS2 chr7 70163606 - SEMA3A chr7 83689874 - Exonic hg19 SARC TCGA-DX-A1L1-01A 8 1 Out-of-frame Intra-chr q11.22 q21.11 Seq+ 58373 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AUTS2-TBC1D30 AUTS2 chr7 69599557 - TBC1D30 chr12 65221615 + Exonic hg19 LGG TCGA-DU-A5TY-01A 7 5 Out-of-frame Inter-chr q11.22 q14.3 Seq+ 58374 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AVIL-HIP1R AVIL chr12 58200143 - HIP1R chr12 123332578 + Exonic hg19 GBM TCGA-06-0129-01A 2 11 In-Frame Intra-chr q14.1 q24.31 Seq+ 58375 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AVIL-TRHDE AVIL chr12 58201977 - TRHDE chr12 72680461 + Exonic hg19 SKCM TCGA-ER-A2NE-06A 49 32 Out-of-frame Intra-chr q14.1 q21.1 Seq+ 58376 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AXIN1-BBX AXIN1 chr16 396148 - BBX chr3 107466812 + Exonic hg19 OV TCGA-61-2109-01A 3 1 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene q13.12 Transcription factor Seq+ 58377 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AXIN1-IFT140 AXIN1 chr16 354304 - IFT140 chr16 1576797 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 4 3 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 58378 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AXIN1-ITCH AXIN1 chr16 396148 - ITCH chr20 32957200 + Exonic hg19 BRCA TCGA-D8-A140-01A 3 3 CDS-5'UTR Inter-chr p13.3 Oncogene Tumor suppressor gene q11.22 Seq+ 58379 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AXIN1-ITFG3 AXIN1 chr16 402369 - ITFG3 chr16 299548 + Exonic hg19 BRCA TCGA-A8-A09I-01A 5 15 5'UTR-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene Seq+ 58380 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AXIN1-TMEM207 AXIN1 chr16 354304 - TMEM207 chr3 190165616 - Exonic hg19 LUSC TCGA-77-8008-01A 3 2 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene q28 Seq+ 58381 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AXIN1-TMEM8A AXIN1 chr16 364543 - TMEM8A chr16 427848 - Exonic hg19 LUSC TCGA-98-A53A-01A 5 2 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 58382 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AXIN2-EIF2AK2 AXIN2 chr17 63524685 - EIF2AK2 chr2 37342384 - Exonic hg19 SKCM TCGA-ER-A195-06A 2 8 Out-of-frame Inter-chr q24.1 Tumor suppressor gene p22.2 58383 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AXIN2-VWA3B AXIN2 chr17 63553924 - VWA3B chr2 98872587 + Exonic hg19 PAAD TCGA-IB-AAUP-01A 13 7 In-Frame Inter-chr q24.1 Tumor suppressor gene q11.2 Seq+ 58384 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AXL-SQSTM1 AXL chr19 41767670 - SQSTM1 chr5 179250858 + Exonic hg19 SARC TCGA-DX-A6YQ-01A 2 2 3'UTR-CDS Inter-chr q13.2 TK:Axl Oncogene q35.3 58385 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AXL-ZNF565 AXL chr19 41762516 - ZNF565 chr19 36686058 - Exonic hg19 OV TCGA-25-1877-01A 2 6 In-Frame Intra-chr q13.2 TK:Axl Oncogene q13.12 Transcription factor Seq+ 58386 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AZGP1-FAR1 AZGP1 chr7 99564354 - FAR1 chr11 13744912 + Exonic hg19 BRCA TCGA-BH-A28Q-01A 2 3 Out-of-frame Inter-chr q22.1 Tumor suppressor gene p15.3 58387 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AZGP1-TYK2 AZGP1 chr7 99564354 - TYK2 chr19 10491352 - Exonic hg19 BRCA TCGA-E9-A5UO-01A 2 16 Out-of-frame Inter-chr q22.1 Tumor suppressor gene p13.2 TK:JakA 58388 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AZIN1-ATP6V1C1 AZIN1 chr8 103870241 - ATP6V1C1 chr8 104053026 + Exonic hg19 SKCM TCGA-BF-A1PX-01A 7 6 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 58389 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AZIN1-ITPR1 AZIN1 chr8 103870241 - ITPR1 chr3 4669447 + Exonic hg19 LGG TCGA-DU-A7TA-01A 4 2 5'UTR-CDS Inter-chr q22.3 p26.1 Seq+ 58390 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AZIN1-RNF19A AZIN1 chr8 103870241 - RNF19A chr8 101325600 - Exonic hg19 SKCM TCGA-FR-A2OS-01A 33 21 5'UTR-5'UTR Intra-chr q22.3 q22.2 Seq+ 58391 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AZIN1-ZFPM2 AZIN1 chr8 103870241 - ZFPM2 chr8 106456508 + Exonic hg19 PRAD TCGA-CH-5767-01A 40 40 5'UTR-CDS Intra-chr q22.3 q22.3 Transcription factor Seq+ 58392 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq AZU1-TYK2 AZU1 chr19 832017 - TYK2 chr19 10491352 - Exonic hg19 LAML TCGA-AB-3007-03A 2 2 Out-of-frame Intra-chr p13.3 p13.2 TK:JakA 58393 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B2M-CCT5 B2M chr15 45010359 - CCT5 chr5 10250033 + Exonic hg19 DLBC TCGA-GS-A9U3-01A 2 1 Out-of-frame Inter-chr Oncogene p15.2 58394 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B2M-PPP4R1 B2M chr15 45003811 - PPP4R1 chr18 9562073 - Exonic hg19 SKCM TCGA-ER-A198-06A 331 126 Out-of-frame Inter-chr Oncogene p11.22 Seq+ 58395 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B3GALNT2-LBR B3GALNT2 chr1 235634164 - LBR chr1 225611791 - Exonic hg19 SARC TCGA-DX-AB2H-01A 12 9 CDS-5'UTR Intra-chr q42.12 Seq+ 58396 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B3GALNT2-LYST B3GALNT2 chr1 235647638 - LYST chr1 235850347 - Exonic hg19 BLCA TCGA-G2-AA3B-01A 4 1 In-Frame Intra-chr q42.3 58397 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B3GALTL-ALOX5AP B3GALTL chr13 31898032 - ALOX5AP chr13 31330081 + Exonic hg19 BLCA TCGA-DK-AA6P-01A 27 16 Out-of-frame Intra-chr q12.3 Seq+ 58398 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B3GALTL-C13orf26 B3GALTL chr13 31835219 - C13orf26 chr13 31548983 + Exonic hg19 BLCA TCGA-BL-A13J-01A 30 7 Out-of-frame Intra-chr 58399 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B3GALTL-C13orf26 B3GALTL chr13 31803431 - C13orf26 chr13 31531010 + Exonic hg19 SKCM TCGA-ER-A19T-01A 8 6 Out-of-frame Intra-chr 58400 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B3GALTL-MTUS2 B3GALTL chr13 31898032 - MTUS2 chr13 30014120 + Exonic hg19 BRCA TCGA-BH-A0HB-01A 3 8 In-Frame Intra-chr q12.3 Seq+ 58401 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B3GALTL-STK33 B3GALTL chr13 31789237 - STK33 chr11 8496613 - Exonic hg19 BRCA TCGA-AR-A24K-01A 3 9 CDS-5'UTR Inter-chr p15.4 CAMK:CAMK-Unique Seq+ 58402 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B3GNT3-INSL3 B3GNT3 chr19 17906015 - INSL3 chr19 17927868 - Exonic hg19 UCEC TCGA-D1-A3JP-01A 8 13 5'UTR-CDS Intra-chr p13.11 p13.11 Seq+ 58403 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B3GNT5-ALG3 B3GNT5 chr3 182971260 - ALG3 chr3 183963600 - Exonic hg19 LUSC TCGA-56-5898-01A 143 62 5'UTR-CDS Intra-chr q27.1 q27.1 Seq+ 58404 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B3GNT5-CAMK2N2 B3GNT5 chr3 182971260 - CAMK2N2 chr3 183978015 - Exonic hg19 LUSC TCGA-56-5898-01A 15 14 5'UTR-CDS Intra-chr q27.1 q27.1 Seq+ 58405 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B3GNTL1-CLCN4 B3GNTL1 chr17 81006347 - CLCN4 chrX 10153062 + Exonic hg19 BRCA TCGA-BH-A6R9-01A 2 3 CDS-5'UTR Inter-chr p22.2 Seq+ 58406 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B3GNTL1-LRRC3C B3GNTL1 chr17 80962991 - LRRC3C chr17 38100186 + Exonic hg19 BRCA TCGA-A2-A0EY-01A 6 1 Out-of-frame Intra-chr q21.1 58407 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B4GALNT1-EPYC B4GALNT1 chr12 58025698 - EPYC chr12 91396355 - Exonic hg19 SARC TCGA-WK-A8XO-01A 4 7 CDS-5'UTR Intra-chr q13.3 q21.33 Seq+ 58408 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B4GALNT1-TSFM B4GALNT1 chr12 58025698 - TSFM chr12 58186769 + Exonic hg19 SARC TCGA-DX-AB2H-01A 161 117 Out-of-frame Intra-chr q13.3 q14.1 Seq+ 58409 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B4GALNT3-CCDC77 B4GALNT3 chr12 569711 - CCDC77 chr12 520913 + Exonic hg19 BRCA TCGA-AO-A0J2-01A 5 2 Out-of-frame Intra-chr p13.33 p13.33 Seq+ 58410 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B4GALNT3-SLCO4A1 B4GALNT3 chr12 666032 - SLCO4A1 chr20 61290029 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 5 4 In-Frame Inter-chr p13.33 q13.33 Seq+ 58411 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B4GALT1-AQP7 B4GALT1 chr9 33166756 - AQP7 chr9 33386539 - Exonic hg19 BRCA TCGA-LL-A9Q3-01A 2 1 CDS-5'UTR Intra-chr p21.1 p13.3 Seq+ 58412 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B4GALT1-BAG1 B4GALT1 chr9 33166756 - BAG1 chr9 33262828 - Exonic hg19 LUAD TCGA-91-7771-01A 46 26 In-Frame Intra-chr p21.1 p13.3 Seq+ 58413 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B4GALT1-BAG1 B4GALT1 chr9 33166756 - BAG1 chr9 33262828 - Exonic hg19 LIHC TCGA-DD-A3A5-01A 36 17 In-Frame Intra-chr p21.1 p13.3 Seq+ 58414 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B4GALT1-BAG1 B4GALT1 chr9 33166756 - BAG1 chr9 33262828 - Exonic hg19 CESC TCGA-EA-A1QS-01A 210 130 In-Frame Intra-chr p21.1 p13.3 Seq+ 58415 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B4GALT1-BAG1 B4GALT1 chr9 33166756 - BAG1 chr9 33262828 - Exonic hg19 UCS TCGA-N9-A4PZ-01A 14 5 In-Frame Intra-chr p21.1 p13.3 Seq+ 58416 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B4GALT1-FAM201A B4GALT1 chr9 33135187 - FAM201A chr9 38621829 + Exonic hg19 BRCA TCGA-A7-A2KD-01A 39 4 CDS-5'UTR Intra-chr p21.1 p13.1 Seq+ 58417 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B4GALT1-KIAA1045 B4GALT1 chr9 33120417 - KIAA1045 chr9 34971292 + Exonic hg19 LUSC TCGA-46-3765-01A 4 8 CDS-5'UTR Intra-chr p21.1 Seq+ 58418 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B4GALT1-NFX1 B4GALT1 chr9 33135187 - NFX1 chr9 33354084 + Exonic hg19 BRCA TCGA-AO-A0JD-01A 39 12 Out-of-frame Intra-chr p21.1 p13.3 Transcription factor Seq+ 58419 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B4GALT3-BCAS3 B4GALT3 chr1 161147213 - BCAS3 chr17 59161828 + Exonic hg19 LUAD TCGA-55-8511-01A 35 63 5'UTR-CDS Inter-chr q23.3 q23.2 Seq+ 58420 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B4GALT3-ERO1LB B4GALT3 chr1 161143395 - ERO1LB chr1 236406795 - Exonic hg19 SARC TCGA-FX-A2QS-01A 12 12 In-Frame Intra-chr q23.3 Seq+ 58421 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B4GALT4-ACSL5 B4GALT4 chr3 118945656 - ACSL5 chr10 114182083 + Exonic hg19 LUSC TCGA-56-5897-01A 45 24 In-Frame Inter-chr q13.32 q25.2 Seq+ 58422 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B4GALT4-CBLB B4GALT4 chr3 118955700 - CBLB chr3 105572508 - Exonic hg19 LGG TCGA-WY-A85C-01A 2 3 5'UTR-CDS Intra-chr q13.32 q13.11 Seq+ 58423 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B4GALT5-ASIP B4GALT5 chr20 48330113 - ASIP chr20 32848171 + Exonic hg19 ACC TCGA-OR-A5KY-01A 26 36 CDS-5'UTR Intra-chr q13.13 q11.22 Seq+ 58424 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B4GALT5-SPATA2 B4GALT5 chr20 48273105 - SPATA2 chr20 48525129 - Exonic hg19 UCEC TCGA-EY-A54A-01A 32 7 CDS-5'UTR Intra-chr q13.13 q13.13 Seq+ 58425 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B4GALT5-TBL3 B4GALT5 chr20 48330113 - TBL3 chr16 2024057 + Exonic hg19 LIHC TCGA-BC-A8YO-01A 5 3 Out-of-frame Inter-chr q13.13 p13.3 Seq+ 58426 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B4GALT5-TOX2 B4GALT5 chr20 48330113 - TOX2 chr20 42602007 + Exonic hg19 LUAD TCGA-75-6214-01A 10 23 Out-of-frame Intra-chr q13.13 q13.12 Seq+ 58427 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B4GALT7-NSD1 B4GALT7 chr5 177035623 - NSD1 chr5 176618885 + Exonic hg19 BRCA TCGA-AO-A12F-01A 6 10 In-Frame Intra-chr q35.3 q35.3 Oncogene Seq+ 58428 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B4GALT7-NSD1 B4GALT7 chr5 177027261 - NSD1 chr5 176665238 + Exonic hg19 UCS TCGA-N6-A4VC-01A 2 5 Out-of-frame Intra-chr q35.3 q35.3 Oncogene Seq+ 58429 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B9D1-EPN2 B9D1 chr17 19250582 - EPN2 chr17 19232024 + Exonic hg19 LGG TCGA-P5-A5F1-01A 3 3 In-Frame Intra-chr p11.2 p11.2 58430 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B9D2-HNRNPL B9D2 chr19 41863802 - HNRNPL chr19 39327420 - Exonic hg19 STAD TCGA-CG-4477-01A 18 21 In-Frame Intra-chr q13.2 Seq+ 58431 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq B9D2-REEP6 B9D2 chr19 41869337 - REEP6 chr19 1495293 + Exonic hg19 ESCA TCGA-L5-A891-01A 24 112 In-Frame Intra-chr q13.2 p13.3 Seq+ 58432 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAALC-UBR5 BAALC chr8 104153285 - UBR5 chr8 103285000 - Exonic hg19 SKCM TCGA-FR-A2OS-01A 3 16 Out-of-frame Intra-chr q22.3 q22.3 Oncogene Seq+ 58433 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAAT-STAT6 BAAT chr9 104122699 - STAT6 chr12 57496773 - Exonic hg19 LIHC TCGA-CC-A5UD-01A 2 1 3'UTR-3'UTR Inter-chr q31.1 q13.3 Transcription factor 58434 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BACE2-SRGAP1 BACE2 chr21 42540502 - SRGAP1 chr12 64377727 + Exonic hg19 CESC TCGA-EK-A2PM-01A 4 2 Out-of-frame Inter-chr q22.2 q14.2 58435 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BACE2-TACR1 BACE2 chr21 42629253 - TACR1 chr2 75278574 - Exonic hg19 SARC TCGA-DX-A23R-01A 2 1 Out-of-frame Inter-chr q22.2 p12 Seq+ 58436 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BACE2-WDR81 BACE2 chr21 42540502 - WDR81 chr17 1638866 + Exonic hg19 STAD TCGA-BR-7901-01A 41 92 Out-of-frame Inter-chr q22.2 Seq+ 58437 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BACH1-C21orf7 BACH1 chr21 30693835 - C21orf7 chr21 30521510 + Exonic hg19 LUSC TCGA-94-7557-01A 4 3 Out-of-frame Intra-chr q21.3 Transcription factor 58438 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BACH1-C21orf7 BACH1 chr21 30702014 - C21orf7 chr21 30505627 + Exonic hg19 BLCA TCGA-BT-A3PK-01A 8 9 Out-of-frame Intra-chr q21.3 Transcription factor 58439 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BACH1-C21orf7 BACH1 chr21 30671274 - C21orf7 chr21 30503116 + Exonic hg19 LUAD TCGA-L9-A5IP-01A 15 17 Out-of-frame Intra-chr q21.3 Transcription factor 58440 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BACH1-DSCR3 BACH1 chr21 30702014 - DSCR3 chr21 38612940 - Exonic hg19 HNSC TCGA-CQ-7065-01A 12 5 In-Frame Intra-chr q21.3 Transcription factor q22.13 Seq+ 58441 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BACH1-ODZ1 BACH1 chr21 30566581 - ODZ1 chrX 123775841 - Exonic hg19 KIRC TCGA-CJ-5681-01A 29 23 5'UTR-CDS Inter-chr q21.3 Transcription factor 58442 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BACH1-OSBPL8 BACH1 chr21 30702014 - OSBPL8 chr12 76752591 - Exonic hg19 SARC TCGA-3B-A9HS-01A 12 13 In-Frame Inter-chr q21.3 Transcription factor q21.2 Seq+ 58443 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BACH2-MAP3K7 BACH2 chr6 90916288 - MAP3K7 chr6 91281526 - Exonic hg19 LGG TCGA-DU-6403-01A 8 7 5'UTR-CDS Intra-chr q15 Transcription factor q15 STE:STE11 Oncogene Seq+ 58444 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAD-TRMT112 BAD chr11 64051654 - TRMT112 chr11 64084837 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 2 10 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 58445 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAG2-RNF114 BAG2 chr6 57037608 - RNF114 chr20 48565785 + Exonic hg19 LUAD TCGA-49-4487-01A 17 4 Out-of-frame Inter-chr p12.1 q13.13 Seq+ 58446 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAG2-ZNF451 BAG2 chr6 57037608 - ZNF451 chr6 57025882 + Exonic hg19 BRCA TCGA-AN-A0AR-01A 9 5 Out-of-frame Intra-chr p12.1 p12.1 Transcription factor Seq+ 58447 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAG4-FGFR1 BAG4 chr8 38050313 - FGFR1 chr8 38283763 - Exonic hg19 LUSC TCGA-22-5480-01A 33 23 In-Frame Intra-chr p11.23 p11.23 TK:FGFR Oncogene KB Pub Seq+ 58448 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAG4-NEDD8 BAG4 chr8 38034657 - NEDD8 chr14 24687637 - Exonic hg19 BRCA TCGA-EW-A1PH-01A 131 18 In-Frame Inter-chr p11.23 q12 Seq+ 58449 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAG4-NEDD8-MDP1 BAG4 chr8 38034657 - NEDD8-MDP1 chr14 24687637 - Exonic hg19 BRCA TCGA-EW-A1PH-01A 123 169 Out-of-frame Inter-chr p11.23 q12 58450 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAG4-TP53INP1 BAG4 chr8 38034657 - TP53INP1 chr8 95953319 - Exonic hg19 BRCA TCGA-A2-A1G4-01A 5 2 CDS-5'UTR Intra-chr p11.23 q22.1 Tumor suppressor gene 58451 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAG4-WRN BAG4 chr8 38050313 - WRN chr8 31012140 + Exonic hg19 BLCA TCGA-FD-A62O-01A 42 25 In-Frame Intra-chr p11.23 p12 Oncogene Seq+ 58452 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAG4-ZMAT4 BAG4 chr8 38034657 - ZMAT4 chr8 40683199 - Exonic hg19 BRCA TCGA-AC-A2BM-01A 25 40 CDS-5'UTR Intra-chr p11.23 p11.21 Transcription factor Seq+ 58453 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAG6-LY6G5C BAG6 chr6 31616454 - LY6G5C chr6 31644897 - Exonic hg19 BRCA TCGA-AN-A0AL-01A 345 293 Out-of-frame Intra-chr p21.33 Seq+ 58454 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAG6-TAF8 BAG6 chr6 31612723 - TAF8 chr6 42036203 + Exonic hg19 LUSC TCGA-60-2722-01A 13 3 In-Frame Intra-chr p21.33 p21.1 58455 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAHD1-C15orf23 BAHD1 chr15 40733467 - C15orf23 chr15 40678563 + Exonic hg19 LIHC TCGA-2Y-A9H0-01A 8 9 5'UTR-CDS Intra-chr q15.1 58456 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAI1-EXT1 BAI1 chr8 143592434 - EXT1 chr8 118834836 - Exonic hg19 LGG TCGA-HW-A5KK-01A 11 3 In-Frame Intra-chr q24.11 Oncogene Tumor suppressor gene Seq+ 58457 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAI2-HS3ST4 BAI2 chr1 32221600 - HS3ST4 chr16 26146933 + Exonic hg19 GBM TCGA-16-1045-01B 16 18 Out-of-frame Inter-chr p12.1 Seq+ 58458 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAI2-SPOCD1 BAI2 chr1 32221600 - SPOCD1 chr1 32259836 - Exonic hg19 BRCA TCGA-BH-A0AV-01A 3 2 Out-of-frame Intra-chr p35.2 Seq+ 58459 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAIAP2-TBCD BAIAP2 chr17 79060380 - TBCD chr17 80847544 + Exonic hg19 HNSC TCGA-BA-6871-01A 101 92 In-Frame Intra-chr q25.3 Seq+ 58460 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAIAP2L2-PLA2G6 BAIAP2L2 chr22 38506482 - PLA2G6 chr22 38516916 - Exonic hg19 HNSC TCGA-CN-4740-01A 58 11 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 58461 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAIAP2L2-PLA2G6 BAIAP2L2 chr22 38506482 - PLA2G6 chr22 38509661 - Exonic hg19 PAAD TCGA-F2-A7TX-01A 248 107 In-Frame Intra-chr q13.1 q13.1 Seq+ 58462 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAIAP2L2-TMEM184B BAIAP2L2 chr22 38493039 - TMEM184B chr22 38627340 - Exonic hg19 ESCA TCGA-L5-A4OQ-01A 2 20 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 58463 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BANK1-AGMO BANK1 chr4 102965064 - AGMO chr7 15240984 - Exonic hg19 PRAD TCGA-HC-A6AL-01A 20 8 Out-of-frame Inter-chr q24 p21.2 Seq+ 58464 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BANK1-C4orf22 BANK1 chr4 102839346 - C4orf22 chr4 81884671 + Exonic hg19 PRAD TCGA-XK-AAJT-01A 18 19 In-Frame Intra-chr q24 q21.21 Seq+ 58465 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BANK1-GSTCD BANK1 chr4 102965064 - GSTCD chr4 106744111 + Exonic hg19 PRAD TCGA-YL-A8S8-01A 135 43 In-Frame Intra-chr q24 q24 Seq+ 58466 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BANP-JPH3 BANP chr16 88052273 - JPH3 chr16 87677864 + Exonic hg19 SKCM TCGA-ER-A1A1-06A 8 13 In-Frame Intra-chr q24.2 Tumor suppressor gene q24.2 Seq+ 58467 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAP1-DNAH1 BAP1 chr3 52439781 - DNAH1 chr3 52378506 + Exonic hg19 LGG TCGA-TQ-A7RW-01A 32 26 Out-of-frame Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 Seq+ 58468 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAP1-KB-1507C5.2 BAP1 chr3 52441974 - KB-1507C5.2 chr8 103892123 + Exonic hg19 LIHC TCGA-ED-A82E-01A 35 18 Out-of-frame Inter-chr p21.1 Oncogene Tumor suppressor gene 58469 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAP1-PBRM1 BAP1 chr3 52438469 - PBRM1 chr3 52663051 - Exonic hg19 SKCM TCGA-ER-A3ES-06A 5 2 In-Frame Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 Oncogene Tumor suppressor gene Seq+ 58470 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAP1-PLXNB1 BAP1 chr3 52437154 - PLXNB1 chr3 48455480 - Exonic hg19 MESO TCGA-UD-AABY-01A 7 2 In-Frame Intra-chr p21.1 Oncogene Tumor suppressor gene p21.31 58471 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAP1-RILP BAP1 chr3 52443570 - RILP chr17 1551789 - Exonic hg19 MESO TCGA-SH-A7BD-01A 128 139 Out-of-frame Inter-chr p21.1 Oncogene Tumor suppressor gene Tumor suppressor gene Seq+ 58472 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAP1-TCEA3 BAP1 chr3 52440269 - TCEA3 chr1 23745632 - Exonic hg19 MESO TCGA-MQ-A4LC-01A 43 17 In-Frame Inter-chr p21.1 Oncogene Tumor suppressor gene Seq+ 58473 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BARD1-C6orf222 BARD1 chr2 215645284 - C6orf222 chr6 36291967 - Exonic hg19 ESCA TCGA-L5-A8NT-01A 2 10 Out-of-frame Inter-chr q35 Tumor suppressor gene p21.31 Seq+ 58474 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAX-DHDH BAX chr19 49459590 - DHDH chr19 49438257 + Exonic hg19 BRCA TCGA-EW-A2FS-01A 9 6 In-Frame Intra-chr q13.33 Tumor suppressor gene q13.33 Seq+ 58475 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAX-VAV2 BAX chr19 49464171 - VAV2 chr9 136629231 - Exonic hg19 LIHC TCGA-DD-A73A-01A 10 4 In-Frame Inter-chr q13.33 Tumor suppressor gene q34.2 Seq+ 58476 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAZ1A-NKX2-1 BAZ1A chr14 35331250 - NKX2-1 chr14 36988575 - Exonic hg19 LUAD TCGA-L9-A444-01A 4 4 Out-of-frame Intra-chr q13.2 q13.3 58477 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAZ1A-RNF115 BAZ1A chr14 35343698 - RNF115 chr1 145646115 + Exonic hg19 LUSC TCGA-63-6202-01A 25 8 Out-of-frame Inter-chr q13.2 q21.1 Seq+ 58478 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAZ1B-BCL7B BAZ1B chr7 72879769 - BCL7B chr7 72966572 - Exonic hg19 LIHC TCGA-XR-A8TG-01A 16 9 In-Frame Intra-chr q11.23 q11.23 Seq+ 58479 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAZ1B-EDEM3 BAZ1B chr7 72861594 - EDEM3 chr1 184706845 - Exonic hg19 UCEC TCGA-EY-A2OQ-01A 2 3 Out-of-frame Inter-chr q11.23 q25.3 58480 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAZ1B-MLXIPL BAZ1B chr7 72903524 - MLXIPL chr7 73030507 - Exonic hg19 STAD TCGA-CG-4443-01A 3 4 Out-of-frame Intra-chr q11.23 q11.23 Transcription factor Seq+ 58481 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAZ1B-MLXIPL BAZ1B chr7 72873866 - MLXIPL chr7 73014025 - Exonic hg19 LIHC TCGA-EP-A2KA-01A 18 7 Out-of-frame Intra-chr q11.23 q11.23 Transcription factor Seq+ 58482 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAZ1B-POMZP3 BAZ1B chr7 72873866 - POMZP3 chr7 76241130 - Exonic hg19 PRAD TCGA-HC-8265-01A 10 6 In-Frame Intra-chr q11.23 Seq+ 58483 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAZ1B-ZP3 BAZ1B chr7 72873866 - ZP3 chr7 76069567 + Exonic hg19 PRAD TCGA-HC-8265-01A 11 9 In-Frame Intra-chr q11.23 q11.23 Seq+ 58484 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAZ2A-ACVR1B BAZ2A chr12 57023909 - ACVR1B chr12 52369049 + Exonic hg19 LUAD TCGA-67-3774-01A 14 11 CDS-5'UTR Intra-chr q13.3 Transcription factor q13.13 Oncogene Seq+ 58485 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAZ2A-BIN2 BAZ2A chr12 57023909 - BIN2 chr12 51686128 - Exonic hg19 LUAD TCGA-49-6745-01A 25 27 Out-of-frame Intra-chr q13.3 Transcription factor q13.13 Seq+ 58486 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAZ2A-NACA BAZ2A chr12 57023909 - NACA chr12 57119237 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 3 42 Out-of-frame Intra-chr q13.3 Transcription factor q13.3 Seq+ 58487 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAZ2A-PRIM1 BAZ2A chr12 57008798 - PRIM1 chr12 57128029 - Exonic hg19 LUSC TCGA-60-2709-01A 3 3 In-Frame Intra-chr q13.3 Transcription factor q13.3 Seq+ 58488 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAZ2A-PRIM1 BAZ2A chr12 57006799 - PRIM1 chr12 57128029 - Exonic hg19 BRCA TCGA-D8-A140-01A 38 48 In-Frame Intra-chr q13.3 Transcription factor q13.3 Seq+ 58489 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAZ2A-PRIM1 BAZ2A chr12 57003520 - PRIM1 chr12 57128029 - Exonic hg19 BLCA TCGA-HQ-A2OE-01A 10 4 In-Frame Intra-chr q13.3 Transcription factor q13.3 Seq+ 58490 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAZ2B-CYBRD1 BAZ2B chr2 160472753 - CYBRD1 chr2 172398095 + Exonic hg19 LUSC TCGA-85-A4JB-01A 8 3 5'UTR-CDS Intra-chr q24.2 Transcription factor q31.1 Seq+ 58491 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAZ2B-ITGB6 BAZ2B chr2 160229556 - ITGB6 chr2 161030650 - Exonic hg19 UCEC TCGA-A5-A7WK-01A 3 3 Out-of-frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 58492 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAZ2B-PLA2R1 BAZ2B chr2 160412334 - PLA2R1 chr2 160885474 - Exonic hg19 CHOL TCGA-W5-AA30-01A 4 1 5'UTR-CDS Intra-chr q24.2 Transcription factor q24.2 Tumor suppressor gene Seq+ 58493 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAZ2B-SLC38A11 BAZ2B chr2 160241666 - SLC38A11 chr2 165802237 - Exonic hg19 CESC TCGA-VS-A8QH-01A 2 1 Out-of-frame Intra-chr q24.2 Transcription factor q24.3 58494 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BAZ2B-STK39 BAZ2B chr2 160412334 - STK39 chr2 168931741 - Exonic hg19 STAD TCGA-BR-A4CR-01A 2 6 5'UTR-CDS Intra-chr q24.2 Transcription factor q24.3 58495 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BBS2-ADAT1 BBS2 chr16 56539862 - ADAT1 chr16 75637069 - Exonic hg19 LUAD TCGA-91-8496-01A 4 3 Out-of-frame Intra-chr q13 q23.1 Seq+ 58496 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BBS2-C15orf41 BBS2 chr16 56553658 - C15orf41 chr15 36946299 + Exonic hg19 SARC TCGA-WP-A9GB-01A 5 4 Out-of-frame Inter-chr q13 q14 Seq+ 58497 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BBS4-CSNK1G1 BBS4 chr15 73028307 - CSNK1G1 chr15 64472653 - Exonic hg19 PRAD TCGA-M7-A725-01A 50 16 In-Frame Intra-chr q24.1 q22.31 Seq+ 58498 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BBS4-TTC23 BBS4 chr15 73024067 - TTC23 chr15 99762069 - Exonic hg19 BRCA TCGA-B6-A0IO-01A 11 11 Out-of-frame Intra-chr q24.1 q26.3 Seq+ 58499 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BBS9-AVL9 BBS9 chr7 33217203 - AVL9 chr7 33078454 + Exonic hg19 LUAD TCGA-NJ-A4YF-01A 3 1 Out-of-frame Intra-chr p14.3 p14.3 58500 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BBX-ALCAM BBX chr3 107497366 - ALCAM chr3 105238911 + Exonic hg19 LIHC TCGA-FV-A4ZQ-01A 3 1 In-Frame Intra-chr q13.12 Transcription factor q13.11 Seq+ 58501 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BBX-DGKG BBX chr3 107245245 - DGKG chr3 186038496 - Exonic hg19 LGG TCGA-P5-A733-01A 3 2 5'UTR-5'UTR Intra-chr q13.12 Transcription factor q27.3 Seq+ 58502 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BBX-KPNA4 BBX chr3 107466886 - KPNA4 chr3 160227659 - Exonic hg19 SKCM TCGA-D3-A2J8-06A 39 24 In-Frame Intra-chr q13.12 Transcription factor q25.33 Seq+ 58503 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BBX-RB1 BBX chr3 107245245 - RB1 chr13 48934153 + Exonic hg19 BRCA TCGA-GM-A2DH-01A 29 11 5'UTR-CDS Inter-chr q13.12 Transcription factor q14.2 Oncogene Tumor suppressor gene Seq+ 58504 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BBX-SLC38A1 BBX chr3 107241954 - SLC38A1 chr12 46602910 - Exonic hg19 SKCM TCGA-WE-A8ZX-06A 10 1 5'UTR-CDS Inter-chr q13.12 Transcription factor q13.11 58505 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BBX-TBC1D23 BBX chr3 107245245 - TBC1D23 chr3 100002451 + Exonic hg19 SKCM TCGA-EE-A20I-06A 21 13 5'UTR-CDS Intra-chr q13.12 Transcription factor q12.1 Seq+ 58506 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BBX-VSTM1 BBX chr3 107245245 - VSTM1 chr19 54545623 - Exonic hg19 SARC TCGA-FX-A2QS-01A 3 2 5'UTR-CDS Inter-chr q13.12 Transcription factor 58507 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAM-IGSF23 BCAM chr19 45318017 - IGSF23 chr19 45130717 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 3 5 In-Frame Intra-chr q13.32 q13.31 Seq+ 58508 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAM-PLAT BCAM chr19 45324677 - PLAT chr8 42051245 - Exonic hg19 PRAD TCGA-HC-7209-01A 2 1 Out-of-frame Inter-chr q13.32 p11.21 58509 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAP31-HMGB3 BCAP31 chrX 152986327 - HMGB3 chrX 150154068 + Exonic hg19 SKCM TCGA-GN-A26D-06A 52 92 CDS-5'UTR Intra-chr q28 q28 Seq+ 58510 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAP31-PDZD4 BCAP31 chrX 152986327 - PDZD4 chrX 153074050 - Exonic hg19 LUAD TCGA-38-4630-01A 99 67 Out-of-frame Intra-chr q28 q28 Seq+ 58511 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAR1-CFDP1 BCAR1 chr16 75276368 - CFDP1 chr16 75327940 - Exonic hg19 LIHC TCGA-CC-5263-01A 58 215 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 58512 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAR1-CFDP1 BCAR1 chr16 75299723 - CFDP1 chr16 75339080 - Exonic hg19 LIHC TCGA-G3-A3CG-01A 4 3 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 58513 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAR3-ABCA4 BCAR3 chr1 94054534 - ABCA4 chr1 94495187 - Exonic hg19 UCEC TCGA-AJ-A3EJ-01A 139 102 In-Frame Intra-chr p22.1 p22.1 Seq+ 58514 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAR3-ABCA4 BCAR3 chr1 94079404 - ABCA4 chr1 94505683 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 13 3 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 58515 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAR3-DNTTIP2 BCAR3 chr1 94311123 - DNTTIP2 chr1 94338770 - Exonic hg19 UCS TCGA-N8-A4PP-01A 8 2 5'UTR-CDS Intra-chr p22.1 p22.1 Seq+ 58516 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAR3-ODF3L2 BCAR3 chr1 94107860 - ODF3L2 chr19 467762 - Exonic hg19 BRCA TCGA-A7-A5ZV-01A 3 2 Out-of-frame Inter-chr p22.1 p13.3 58517 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-ABCA8 BCAS3 chr17 58885437 - ABCA8 chr17 66865920 - Exonic hg19 BRCA TCGA-EW-A1OX-01A 42 19 In-Frame Intra-chr q23.2 q24.2 Seq+ 58518 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-APPBP2 BCAS3 chr17 59067596 - APPBP2 chr17 58577848 - Exonic hg19 BRCA TCGA-B6-A0IN-01A 4 2 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 58519 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-AXIN2 BCAS3 chr17 58885437 - AXIN2 chr17 63554854 - Exonic hg19 BRCA TCGA-AN-A0FD-01A 2 1 CDS-5'UTR Intra-chr q23.2 q24.1 Tumor suppressor gene 58520 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-BRIP1 BCAS3 chr17 59024713 - BRIP1 chr17 59878835 - Exonic hg19 BRCA TCGA-C8-A12P-01A 3 2 In-Frame Intra-chr q23.2 q23.2 Oncogene Seq+ 58521 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-CA10 BCAS3 chr17 58967132 - CA10 chr17 49731097 - Exonic hg19 COAD TCGA-A6-5657-01A 4 2 In-Frame Intra-chr q23.2 q22 Seq+ 58522 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-CYTH1 BCAS3 chr17 59001861 - CYTH1 chr17 76705814 - Exonic hg19 BRCA TCGA-AR-A0TQ-01A 10 7 In-Frame Intra-chr q23.2 q25.3 Seq+ 58523 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-DISP1 BCAS3 chr17 59067596 - DISP1 chr1 223116149 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 2 4 CDS-5'UTR Inter-chr q23.2 q41 Seq+ 58524 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-GH2 BCAS3 chr17 59161925 - GH2 chr17 61958879 - Exonic hg19 BRCA TCGA-E2-A14P-01A 7 1 In-Frame Intra-chr q23.2 q23.3 Seq+ 58525 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-GIT1 BCAS3 chr17 58946044 - GIT1 chr17 27905797 - Exonic hg19 LUAD TCGA-91-6847-01A 4 3 In-Frame Intra-chr q23.2 q11.2 Seq+ 58526 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-GRIK2 BCAS3 chr17 59001861 - GRIK2 chr6 102069824 + Exonic hg19 BRCA TCGA-AN-A0XW-01A 3 2 In-Frame Inter-chr q23.2 q16.3 58527 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-HEATR6 BCAS3 chr17 59093262 - HEATR6 chr17 58128338 - Exonic hg19 BRCA TCGA-A2-A0CZ-01A 7 1 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 58528 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-KAT7 BCAS3 chr17 59161925 - KAT7 chr17 47893165 + Exonic hg19 BRCA TCGA-AR-A250-01A 6 4 Out-of-frame Intra-chr q23.2 q21.33 Transcription factor Seq+ 58529 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-MARCH10 BCAS3 chr17 59024713 - 2019_ 3_ 10_ chr17 60837367 - Exonic hg19 LUSC TCGA-63-7023-01A 62 23 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 58530 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-NFS1 BCAS3 chr17 59112151 - NFS1 chr20 34262539 - Exonic hg19 BRCA TCGA-A1-A0SJ-01A 9 5 Out-of-frame Inter-chr q23.2 q11.22 Seq+ 58531 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-PHF21A BCAS3 chr17 58761397 - PHF21A chr11 46113774 - Exonic hg19 PCPG TCGA-QR-A70G-01B 2 1 CDS-5'UTR Inter-chr q23.2 p11.2 Transcription factor Seq+ 58532 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-POLD4 BCAS3 chr17 59001861 - POLD4 chr11 67120548 - Exonic hg19 BRCA TCGA-AN-A0XW-01A 28 36 In-Frame Inter-chr q23.2 q13.2 Seq+ 58533 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-PRKAA2 BCAS3 chr17 58885437 - PRKAA2 chr1 57140054 + Exonic hg19 BRCA TCGA-A8-A09G-01A 21 7 Out-of-frame Inter-chr q23.2 p32.2 Tumor suppressor gene Seq+ 58534 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-RAD51C BCAS3 chr17 59161925 - RAD51C chr17 56772292 + Exonic hg19 BRCA TCGA-A8-A09I-01A 18 4 In-Frame Intra-chr q23.2 q22 Tumor suppressor gene Seq+ 58535 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-RAD51C BCAS3 chr17 58885437 - RAD51C chr17 56801401 + Exonic hg19 BRCA TCGA-AN-A0XW-01A 20 15 Out-of-frame Intra-chr q23.2 q22 Tumor suppressor gene Seq+ 58536 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-RNF169 BCAS3 chr17 58786686 - RNF169 chr11 74521229 + Exonic hg19 BRCA TCGA-BH-A18R-01A 39 33 In-Frame Inter-chr q23.2 q13.4 Seq+ 58537 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-RNFT1 BCAS3 chr17 59161925 - RNFT1 chr17 58040645 - Exonic hg19 LGG TCGA-DB-A4XF-01A 9 3 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 58538 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-RPS6KB1 BCAS3 chr17 58755275 - RPS6KB1 chr17 57990045 + Exonic hg19 CESC TCGA-C5-A907-01A 20 39 5'UTR-CDS Intra-chr q23.2 q23.1 Oncogene Seq+ 58539 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-SHANK2 BCAS3 chr17 58824640 - SHANK2 chr11 70349036 - Exonic hg19 BRCA TCGA-BH-A18R-01A 14 6 Out-of-frame Inter-chr q23.2 q13.4 Seq+ 58540 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-SYTL2 BCAS3 chr17 59161925 - SYTL2 chr11 85425550 - Exonic hg19 SARC TCGA-DX-AB2Q-01A 5 4 In-Frame Inter-chr q23.2 q14.1 Seq+ 58541 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-TANC2 BCAS3 chr17 58952099 - TANC2 chr17 61271352 + Exonic hg19 BRCA TCGA-UL-AAZ6-01A 2 2 In-Frame Intra-chr q23.2 q23.2 58542 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-VMP1 BCAS3 chr17 58988063 - VMP1 chr17 57895073 + Exonic hg19 BRCA TCGA-A8-A08J-01A 72 32 In-Frame Intra-chr q23.2 q23.1 Seq+ 58543 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-VMP1 BCAS3 chr17 59118253 - VMP1 chr17 57895073 + Exonic hg19 UCEC TCGA-PG-A7D5-01A 19 2 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 58544 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-VMP1 BCAS3 chr17 58988063 - VMP1 chr17 57895073 + Exonic hg19 STAD TCGA-VQ-A92D-01A 6 88 In-Frame Intra-chr q23.2 q23.1 Seq+ 58545 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS3-WIPI1 BCAS3 chr17 58885437 - WIPI1 chr17 66432620 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 8 17 Out-of-frame Intra-chr q23.2 q24.2 Seq+ 58546 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS4-BCAS3 BCAS4 chr20 49411710 - BCAS3 chr17 59445688 + Exonic hg19 KIRC TCGA-CJ-5683-01A 11 1 Out-of-frame Inter-chr q13.13 q23.2 KB Pub 58547 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS4-PTPN1 BCAS4 chr20 49446917 - PTPN1 chr20 49177900 + Exonic hg19 UCEC TCGA-A5-A2K4-01A 3 1 In-Frame Intra-chr q13.13 q13.13 Tumor suppressor gene Seq+ 58548 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS4-PTPN1 BCAS4 chr20 49458437 - PTPN1 chr20 49194957 + Exonic hg19 BRCA TCGA-A8-A07W-01A 49 35 In-Frame Intra-chr q13.13 q13.13 Tumor suppressor gene Seq+ 58549 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS4-PTPN1 BCAS4 chr20 49434819 - PTPN1 chr20 49181506 + Exonic hg19 UCS TCGA-N8-A4PL-01A 2 1 Out-of-frame Intra-chr q13.13 q13.13 Tumor suppressor gene Seq+ 58550 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAS4-SLC9A8 BCAS4 chr20 49434819 - SLC9A8 chr20 48481265 + Exonic hg19 STAD TCGA-CG-4449-01A 4 3 Out-of-frame Intra-chr q13.13 q13.13 Seq+ 58551 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAT1-ITPR2 BCAT1 chr12 25101861 - ITPR2 chr12 26493261 - Exonic hg19 BRCA TCGA-A2-A04U-01A 7 3 In-Frame Intra-chr p12.1 p11.23 Seq+ 58552 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAT1-PRB3 BCAT1 chr12 24995016 - PRB3 chr12 11421602 - Exonic hg19 OV TCGA-25-1870-01A 132 33 In-Frame Intra-chr p12.1 p13.2 Seq+ 58553 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAT1-RECQL BCAT1 chr12 25101861 - RECQL chr12 21652549 - Exonic hg19 BRCA TCGA-E2-A1LL-01A 3 1 CDS-5'UTR Intra-chr p12.1 p12.1 58554 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCAT2-IRF3 BCAT2 chr19 49314241 - IRF3 chr19 50166515 - Exonic hg19 LGG TCGA-DU-7010-01A 87 138 Out-of-frame Intra-chr q13.33 q13.33 Tumor suppressor gene Transcription factor Seq+ 58555 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCCIP-C10orf137 BCCIP chr10 127512291 - C10orf137 chr10 127426487 + Exonic hg19 LUAD TCGA-97-8176-01A 7 2 In-Frame Intra-chr q26.2 58556 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCKDHA-TMEM91 BCKDHA chr19 41925201 - TMEM91 chr19 41884186 + Exonic hg19 THCA TCGA-KS-A4I1-01A 253 146 CDS-5'UTR Intra-chr q13.2 q13.2 Seq+ 58557 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCKDHB-ME1 BCKDHB chr6 80912929 - ME1 chr6 84117620 - Exonic hg19 PRAD TCGA-EJ-7789-01A 4 5 In-Frame Intra-chr q14.1 q14.2 Seq+ 58558 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCKDHB-TTK BCKDHB chr6 80912929 - TTK chr6 80751836 + Exonic hg19 BLCA TCGA-K4-A3WU-01B 16 14 In-Frame Intra-chr q14.1 q14.1 Other:TTK Seq+ 58559 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL10-DPYD BCL10 chr1 85741979 - DPYD chr1 98015300 - Exonic hg19 SARC TCGA-DX-AATS-01A 8 1 Out-of-frame Intra-chr p22.3 Oncogene Tumor suppressor gene p21.3 Oncogene 58560 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL11A-PTPLA BCL11A chr2 60773106 - PTPLA chr10 17646046 - Exonic hg19 ESCA TCGA-IG-A8O2-01A 2 35 Out-of-frame Inter-chr p16.1 Oncogene Transcription factor Seq+ 58561 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL11B-MIPOL1 BCL11B chr14 99723808 - MIPOL1 chr14 37688758 + Exonic hg19 BLCA TCGA-C4-A0F7-01A 111 61 CDS-5'UTR Intra-chr q32.2 Oncogene Transcription factor q13.3 Seq+ 58562 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL2L11-ACOXL BCL2L11 chr2 111881716 - ACOXL chr2 111875193 + Exonic hg19 LUSC TCGA-46-6025-01A 32 19 Out-of-frame Intra-chr q13 Tumor suppressor gene q13 Seq+ 58563 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL2L11-ACOXL BCL2L11 chr2 111881716 - ACOXL chr2 111875193 + Exonic hg19 BRCA TCGA-B6-A0RS-01A 11 3 Out-of-frame Intra-chr q13 Tumor suppressor gene q13 Seq+ 58564 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL2L11-AFMID BCL2L11 chr2 111881716 - AFMID chr17 76187051 + Exonic hg19 BRCA TCGA-BH-A18Q-01A 18 8 Out-of-frame Inter-chr q13 Tumor suppressor gene q25.3 Seq+ 58565 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL2L11-BRAF BCL2L11 chr2 111881716 - BRAF chr7 140482957 - Exonic hg19 THCA TCGA-ET-A2MX-01A 8 10 In-Frame Inter-chr q13 Tumor suppressor gene q34 TKL:RAF Oncogene Seq+ 58566 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL2L12-FLT3LG BCL2L12 chr19 50173745 - FLT3LG chr19 49989272 + Exonic hg19 PRAD TCGA-ZG-A9LN-01A 4 6 CDS-3'UTR Intra-chr q13.33 q13.33 Seq+ 58567 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL2L13-CECR2 BCL2L13 chr22 18166087 - CECR2 chr22 18027838 + Exonic hg19 LUSC TCGA-77-8140-01A 2 2 In-Frame Intra-chr q11.21 q11.1 58568 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL2L13-CUX2 BCL2L13 chr22 18138598 - CUX2 chr12 111772245 + Exonic hg19 HNSC TCGA-T2-A6X0-01A 10 8 In-Frame Inter-chr q11.21 q24.11 Transcription factor Seq+ 58569 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL2L13-DGCR14 BCL2L13 chr22 18166087 - DGCR14 chr22 19124945 - Exonic hg19 UCS TCGA-N6-A4VE-01A 70 44 In-Frame Intra-chr q11.21 q11.21 Seq+ 58570 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL2L13-GAB4 BCL2L13 chr22 18138598 - GAB4 chr22 17446158 - Exonic hg19 PRAD TCGA-HI-7168-01A 166 139 In-Frame Intra-chr q11.21 q11.1 Seq+ 58571 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL2L13-GTPBP1 BCL2L13 chr22 18121652 - GTPBP1 chr22 39126617 + Exonic hg19 KIRP TCGA-P4-A5EB-01A 44 19 5'UTR-CDS Intra-chr q11.21 q13.1 Seq+ 58572 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL2L13-SPECC1 BCL2L13 chr22 18178976 - SPECC1 chr17 20107646 + Exonic hg19 LIHC TCGA-QA-A7B7-01A 12 6 Out-of-frame Inter-chr q11.21 p11.2 58573 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL2L13-VPS8 BCL2L13 chr22 18178976 - VPS8 chr3 184616353 + Exonic hg19 HNSC TCGA-T3-A92N-01A 6 6 In-Frame Inter-chr q11.21 q27.2 Seq+ 58574 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL2L13-ZNF383 BCL2L13 chr22 18185152 - ZNF383 chr19 37733371 + Exonic hg19 BLCA TCGA-DK-A1A3-01A 4 2 Out-of-frame Inter-chr q11.21 q13.12 Transcription factor Seq+ 58575 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL2L14-ETV6 BCL2L14 chr12 12232672 - ETV6 chr12 12037379 + Exonic hg19 BRCA TCGA-A7-A13D-01A 4 3 In-Frame Intra-chr p13.2 Tumor suppressor gene Transcription factor Seq+ 58576 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL2L14-ETV6 BCL2L14 chr12 12232672 - ETV6 chr12 11992074 + Exonic hg19 BRCA TCGA-EW-A6SB-01A 3 5 In-Frame Intra-chr p13.2 Tumor suppressor gene Transcription factor Seq+ 58577 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL2L14-GPR19 BCL2L14 chr12 12240320 - GPR19 chr12 12848445 - Exonic hg19 PRAD TCGA-XK-AAJA-01A 14 6 CDS-5'UTR Intra-chr p13.1 Seq+ 58578 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL3-ATP9B BCL3 chr19 45251385 - ATP9B chr18 77013381 + Exonic hg19 BRCA TCGA-AR-A0U4-01A 2 7 5'UTR-CDS Inter-chr q13.32 Oncogene Seq+ 58579 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL3-IGSF23 BCL3 chr19 45262098 - IGSF23 chr19 45130717 + Exonic hg19 LUAD TCGA-44-2668-01A 3 2 In-Frame Intra-chr q13.32 Oncogene q13.31 Seq+ 58580 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL3-IGSF23 BCL3 chr19 45252303 - IGSF23 chr19 45138701 + Exonic hg19 BRCA TCGA-AR-A2LR-01A 2 6 Out-of-frame Intra-chr q13.32 Oncogene q13.31 Seq+ 58581 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL7A-GLTSCR1 BCL7A chr12 122492832 - GLTSCR1 chr19 48197372 + Exonic hg19 UCEC TCGA-B5-A5OE-01A 4 3 In-Frame Inter-chr Tumor suppressor gene Seq+ 58582 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL7A-KCNIP3 BCL7A chr12 122473333 - KCNIP3 chr2 96040044 + Exonic hg19 BRCA TCGA-AO-A03U-01B 28 17 In-Frame Inter-chr q11.1 Transcription factor Seq+ 58583 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL7A-MSI1 BCL7A chr12 122473333 - MSI1 chr12 120791182 - Exonic hg19 STAD TCGA-CG-4444-01A 14 10 In-Frame Intra-chr q24.31 58584 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL7A-WDR66 BCL7A chr12 122481959 - WDR66 chr12 122441558 + Exonic hg19 CESC TCGA-VS-A9U5-01A 2 3 In-Frame Intra-chr q24.31 Seq+ 58585 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL7B-TBL2 BCL7B chr7 72971817 - TBL2 chr7 72988843 - Exonic hg19 LIHC TCGA-DD-A115-01A 3 1 Out-of-frame Intra-chr q11.23 q11.23 Tumor suppressor gene 58586 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL7C-OTOA BCL7C chr16 30900181 - OTOA chr16 21702905 + Exonic hg19 BRCA TCGA-S3-AA0Z-01A 20 15 Out-of-frame Intra-chr p11.2 p12.2 Seq+ 58587 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL7C-ZNF720 BCL7C chr16 30900181 - ZNF720 chr16 31803951 + Exonic hg19 BRCA TCGA-BH-A18V-01A 2 4 CDS-3'UTR Intra-chr p11.2 p11.2 58588 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL9-BEST3 BCL9 chr1 147013444 - BEST3 chr12 70049593 - Exonic hg19 SARC TCGA-FX-A2QS-01A 15 8 5'UTR-CDS Inter-chr q21.2 Oncogene q15 Seq+ 58589 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL9-C1orf21 BCL9 chr1 147087702 - C1orf21 chr1 184588652 + Exonic hg19 SARC TCGA-VT-AB3D-01A 11 7 In-Frame Intra-chr q21.2 Oncogene q25.3 Seq+ 58590 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL9-GOLPH3L BCL9 chr1 147013444 - GOLPH3L chr1 150636239 - Exonic hg19 CESC TCGA-VS-A8QC-01A 2 2 5'UTR-CDS Intra-chr q21.2 Oncogene q21.3 58591 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL9-IVL BCL9 chr1 147013444 - IVL chr1 152882255 + Exonic hg19 BRCA TCGA-A7-A4SF-01A 6 5 5'UTR-5'UTR Intra-chr q21.2 Oncogene q21.3 Seq+ 58592 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL9-SMCP BCL9 chr1 147013444 - SMCP chr1 152856879 + Exonic hg19 BRCA TCGA-A7-A4SF-01A 2 1 5'UTR-5'UTR Intra-chr q21.2 Oncogene q21.3 Seq+ 58593 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCL9L-DGKI BCL9L chr11 118795947 - DGKI chr7 137374748 - Exonic hg19 SARC TCGA-DX-A1KX-01A 32 30 5'UTR-CDS Inter-chr q23.3 q33 Seq+ 58594 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCLAF1-MAP7 BCLAF1 chr6 136610851 - MAP7 chr6 136742937 - Exonic hg19 BRCA TCGA-D8-A1JM-01A 22 8 5'UTR-5'UTR Intra-chr q23.3 q23.3 Seq+ 58595 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCOR-L3MBTL2 BCOR chrX 39931602 - L3MBTL2 chr22 41605700 + Exonic hg19 LGG TCGA-DU-6404-01A 99 42 In-Frame Inter-chr p11.4 Oncogene q13.2 Seq+ 58596 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCOR-L3MBTL2 BCOR chrX 39931602 - L3MBTL2 chr22 41605700 + Exonic hg19 LGG TCGA-DU-6404-02B 32 16 In-Frame Inter-chr p11.4 Oncogene q13.2 Seq+ 58597 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCOR-PHEX BCOR chrX 40036260 - PHEX chrX 22231021 + Exonic hg19 UCEC TCGA-FI-A3PV-01A 12 3 5'UTR-CDS Intra-chr p11.4 Oncogene p22.11 Seq+ 58598 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCORL1-UTP14A BCORL1 chrX 129173257 - UTP14A chrX 129041343 + Exonic hg19 PCPG TCGA-WB-A820-01A 2 2 Out-of-frame Intra-chr q26.1 Tumor suppressor gene q26.1 Seq+ 58599 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCR-ABL1 BCR chr22 23524426 - ABL1 chr9 133729451 + Exonic hg19 LAML TCGA-AB-2817-03A 38 22 In-Frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q34.12 TK:Abl Oncogene KB Pub Seq+ 58600 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCR-ABL1 BCR chr22 23632600 - ABL1 chr9 133729451 + Exonic hg19 LAML TCGA-AB-2901-03A 28 25 In-Frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q34.12 TK:Abl Oncogene KB Pub Seq+ 58601 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCR-ABL1 BCR chr22 23632600 - ABL1 chr9 133729451 + Exonic hg19 LAML TCGA-AB-2941-03A 47 43 In-Frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q34.12 TK:Abl Oncogene KB Pub Seq+ 58602 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCR-ABL1 BCR chr22 23524426 - ABL1 chr9 133729451 + Exonic hg19 LAML TCGA-AB-2944-03A 3 2 In-Frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q34.12 TK:Abl Oncogene KB Pub Seq+ 58603 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCR-GNAZ BCR chr22 23524426 - GNAZ chr22 23437434 + Exonic hg19 LUSC TCGA-77-7142-01A 4 6 CDS-5'UTR Intra-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q11.22 58604 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCR-HIC2 BCR chr22 23524426 - HIC2 chr22 21797048 + Exonic hg19 UCS TCGA-NA-A4QY-01A 2 2 CDS-5'UTR Intra-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q11.21 Transcription factor Seq+ 58605 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCR-MOV10L1 BCR chr22 23524426 - MOV10L1 chr22 50530430 + Exonic hg19 BRCA TCGA-C8-A27A-01A 2 1 In-Frame Intra-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q13.33 58606 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCR-MRVI1 BCR chr22 23524426 - MRVI1 chr11 10673729 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 28 13 In-Frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene p15.4 Tumor suppressor gene Seq+ 58607 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCR-MYH11 BCR chr22 23637342 - MYH11 chr16 15880589 - Exonic hg19 LUSC TCGA-22-A5C4-01A 46 45 Out-of-frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene Oncogene Seq+ 58608 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCR-PPIL2 BCR chr22 23615961 - PPIL2 chr22 22048105 + Exonic hg19 BLCA TCGA-FD-A43N-01A 18 11 Out-of-frame Intra-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q11.21 Seq+ 58609 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCR-TOM1 BCR chr22 23524426 - TOM1 chr22 35723264 + Exonic hg19 HNSC TCGA-CV-7421-01A 3 4 Out-of-frame Intra-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q12.3 Seq+ 58610 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BCR-UPB1 BCR chr22 23524426 - UPB1 chr22 24890077 + Exonic hg19 HNSC TCGA-CX-7086-01A 8 6 Out-of-frame Intra-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q11.23 Seq+ 58611 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BDH1-C7orf60 BDH1 chr3 197273232 - C7orf60 chr7 112472730 - Exonic hg19 BLCA TCGA-XF-AAMX-01A 7 3 In-Frame Inter-chr 58612 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BDH1-ZBBX BDH1 chr3 197249511 - ZBBX chr3 166960431 - Exonic hg19 LGG TCGA-HT-A5RA-01A 36 19 In-Frame Intra-chr q26.1 Seq+ 58613 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BDP1-CWC27 BDP1 chr5 70849147 - CWC27 chr5 64181270 + Exonic hg19 BRCA TCGA-A2-A0SW-01A 5 2 Out-of-frame Intra-chr q12.3 58614 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BDP1-FAM172A BDP1 chr5 70828254 - FAM172A chr5 93217394 - Exonic hg19 LIHC TCGA-DD-AADB-01A 5 1 In-Frame Intra-chr q15 Tumor suppressor gene 58615 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BEND3-AIM1 BEND3 chr6 107419755 - AIM1 chr6 106989461 + Exonic hg19 LGG TCGA-DU-7010-01A 9 8 In-Frame Intra-chr q21 Seq+ 58616 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BEST3-C12orf28 BEST3 chr12 70092985 - C12orf28 chr12 70297424 + Exonic hg19 SARC TCGA-DX-A23Y-01A 2 5 Out-of-frame Intra-chr q15 58617 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BEST3-C12orf28 BEST3 chr12 70065208 - C12orf28 chr12 70249060 + Exonic hg19 SARC TCGA-PC-A5DN-01A 27 16 Out-of-frame Intra-chr q15 58618 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BEST3-PTPRR BEST3 chr12 70065208 - PTPRR chr12 71158558 - Exonic hg19 SARC TCGA-3B-A9HS-01A 2 2 Out-of-frame Intra-chr q15 q15 Seq+ 58619 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BFAR-SPNS1 BFAR chr16 14749067 - SPNS1 chr16 28994178 + Exonic hg19 LGG TCGA-DU-7006-01A 52 36 In-Frame Intra-chr p11.2 Seq+ 58620 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BGN-ANXA1 BGN chrX 152775004 - ANXA1 chr9 75772570 + Exonic hg19 CESC TCGA-MA-AA43-01A 2 91 Out-of-frame Inter-chr q28 q21.13 Tumor suppressor gene 58621 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BGN-CLCN3 BGN chrX 152775004 - CLCN3 chr4 170623929 + Exonic hg19 LIHC TCGA-DD-A4NB-01A 2 44 Out-of-frame Inter-chr q28 q33 58622 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BGN-CLCN3 BGN chrX 152775004 - CLCN3 chr4 170623929 + Exonic hg19 PAAD TCGA-IB-7654-01A 2 70 Out-of-frame Inter-chr q28 q33 58623 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BGN-ERBB3 BGN chrX 152775004 - ERBB3 chr12 56492035 + Exonic hg19 THCA TCGA-ET-A25M-01A 2 1 Out-of-frame Inter-chr q28 q13.2 Oncogene 58624 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BGN-KIAA2026 BGN chrX 152775004 - KIAA2026 chr9 5954095 - Exonic hg19 BRCA TCGA-E2-A1BD-01A 2 1 3'UTR-CDS Inter-chr q28 p24.1 58625 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BGN-PTP4A2 BGN chrX 152775004 - PTP4A2 chr1 32374561 - Exonic hg19 MESO TCGA-LK-A4NY-01A 2 2 3'UTR-CDS Inter-chr q28 p35.2 58626 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BGN-RABEP1 BGN chrX 152775004 - RABEP1 chr17 5283828 + Exonic hg19 SKCM TCGA-EE-A2A5-06A 2 22 Out-of-frame Inter-chr q28 p13.2 58627 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BGN-SEC63 BGN chrX 152775004 - SEC63 chr6 108214782 - Exonic hg19 SARC TCGA-LI-A67I-01A 2 12 Out-of-frame Inter-chr q28 q21 58628 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BGN-TTN BGN chrX 152774998 - TTN chr2 179511286 - Exonic hg19 HNSC TCGA-CV-5971-01A 2 9 Out-of-frame Inter-chr q28 q31.2 CAMK:MLCK 58629 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BGN-TTN BGN chrX 152774998 - TTN chr2 179511286 - Exonic hg19 HNSC TCGA-DQ-5625-01A 2 2 Out-of-frame Inter-chr q28 q31.2 CAMK:MLCK 58630 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BGN-UTRN BGN chrX 152775004 - UTRN chr6 144665237 + Exonic hg19 LUAD TCGA-44-6774-01A 2 46 Out-of-frame Inter-chr q28 q24.2 58631 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BGN-ZNF827 BGN chrX 152775004 - ZNF827 chr4 146859787 - Exonic hg19 BRCA TCGA-E2-A1L9-01A 2 62 Out-of-frame Inter-chr q28 q31.22 Transcription factor 58632 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BGN-ZNFX1 BGN chrX 152775004 - ZNFX1 chr20 47863418 - Exonic hg19 SARC TCGA-PC-A5DN-01A 2 75 Out-of-frame Inter-chr q28 q13.13 58633 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BHLHE41-RERGL BHLHE41 chr12 26277651 - RERGL chr12 18241890 - Exonic hg19 LGG TCGA-S9-A6WO-01A 3 5 Out-of-frame Intra-chr p12.1 Tumor suppressor gene Transcription factor p12.3 Seq+ 58634 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BICC1-DPYSL4 BICC1 chr10 60461903 - DPYSL4 chr10 134013860 + Exonic hg19 LUAD TCGA-97-7553-01A 8 2 In-Frame Intra-chr q21.1 q26.3 Seq+ 58635 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BICC1-FGFR2 BICC1 chr10 60563002 - FGFR2 chr10 123239535 - Exonic hg19 CHOL TCGA-W5-AA2W-01A 46 20 In-Frame Intra-chr q21.1 q26.13 TK:FGFR Oncogene Seq+ 58636 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BICC1-RAB11FIP1 BICC1 chr10 60380661 - RAB11FIP1 chr8 37735069 - Exonic hg19 UCEC TCGA-A5-A1OH-01A 3 3 Out-of-frame Inter-chr q21.1 p11.23 58637 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BICC1-UBE2D1 BICC1 chr10 60273093 - UBE2D1 chr10 60121098 + Exonic hg19 KIRC TCGA-CJ-4918-01A 2 3 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 58638 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BICD1-C12orf35 BICD1 chr12 32260478 - C12orf35 chr12 32133812 + Exonic hg19 UCEC TCGA-A5-A2K2-01A 8 2 CDS-5'UTR Intra-chr p11.21 58639 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BICD1-C12orf35 BICD1 chr12 32369393 - C12orf35 chr12 32133812 + Exonic hg19 UCS TCGA-N8-A4PP-01A 14 4 CDS-5'UTR Intra-chr p11.21 58640 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BICD1-CCDC91 BICD1 chr12 32260478 - CCDC91 chr12 28603094 + Exonic hg19 PRAD TCGA-KK-A8ID-01A 4 2 In-Frame Intra-chr p11.21 p11.22 Seq+ 58641 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BICD1-CDK6 BICD1 chr12 32260478 - CDK6 chr7 92252400 - Exonic hg19 LUAD TCGA-44-7670-01A 3 3 Out-of-frame Inter-chr p11.21 q21.2 CMGC:CDK Oncogene Tumor suppressor gene Seq+ 58642 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BICD1-DENND5B BICD1 chr12 32369393 - DENND5B chr12 31555577 - Exonic hg19 LIHC TCGA-K7-AAU7-01A 4 1 Out-of-frame Intra-chr p11.21 p11.21 58643 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BICD1-LOH12CR1 BICD1 chr12 32260478 - LOH12CR1 chr12 12588562 + Exonic hg19 TGCT TCGA-2G-AAKD-01A 29 19 Out-of-frame Intra-chr p11.21 Seq+ 58644 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BICD1-SOX5 BICD1 chr12 32260478 - SOX5 chr12 23818498 - Exonic hg19 LGG TCGA-DU-7007-01A 117 41 In-Frame Intra-chr p11.21 p12.1 Transcription factor Seq+ 58645 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BICD1-ZNF438 BICD1 chr12 32491913 - ZNF438 chr10 31138372 - Exonic hg19 LGG TCGA-DB-5277-01A 4 7 CDS-3'UTR Inter-chr p11.21 p11.23 Transcription factor Seq+ 58646 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BIN3-PEBP4 BIN3 chr8 22526557 - PEBP4 chr8 22584733 - Exonic hg19 BRCA TCGA-E9-A22E-01A 21 65 Out-of-frame Intra-chr p21.3 p21.3 Seq+ 58647 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BIN3-PEBP4 BIN3 chr8 22502268 - PEBP4 chr8 22571049 - Exonic hg19 LUAD TCGA-MN-A4N1-01A 183 99 Out-of-frame Intra-chr p21.3 p21.3 Seq+ 58648 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BIRC2-TMEM123 BIRC2 chr11 102239279 - TMEM123 chr11 102272937 - Exonic hg19 CESC TCGA-DS-A0VL-01A 77 58 5'UTR-CDS Intra-chr q22.2 Oncogene q22.2 Seq+ 58649 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BIRC2-YAP1 BIRC2 chr11 102221674 - YAP1 chr11 102033187 + Exonic hg19 STAD TCGA-CG-4443-01A 48 27 5'UTR-CDS Intra-chr q22.2 Oncogene q22.1 Tumor suppressor gene 58650 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BIRC3-CCT5 BIRC3 chr11 102208465 - CCT5 chr5 10250033 + Exonic hg19 KIRC TCGA-A3-3319-01A 2 1 Out-of-frame Inter-chr q22.2 Oncogene p15.2 58651 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BIRC6-ABCC11 BIRC6 chr2 32738221 - ABCC11 chr16 48211024 - Exonic hg19 BRCA TCGA-LL-A7SZ-01A 5 6 Out-of-frame Inter-chr p22.3 q12.1 Seq+ 58652 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BIRC6-EML4 BIRC6 chr2 32774548 - EML4 chr2 42515367 + Exonic hg19 PRAD TCGA-YL-A9WL-01A 8 6 Out-of-frame Intra-chr p22.3 p21 Oncogene Seq+ 58653 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BIRC6-EML6 BIRC6 chr2 32679010 - EML6 chr2 55071184 + Exonic hg19 PRAD TCGA-KC-A4BL-01A 2 1 In-Frame Intra-chr p22.3 p16.1 58654 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BIRC6-FAM82A1 BIRC6 chr2 32823035 - FAM82A1 chr2 38294125 + Exonic hg19 BRCA TCGA-LL-A7SZ-01A 19 36 In-Frame Intra-chr p22.3 58655 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BIRC6-MATN3 BIRC6 chr2 32641231 - MATN3 chr2 20206071 - Exonic hg19 UCEC TCGA-EO-A3KW-01A 31 9 In-Frame Intra-chr p22.3 p24.1 Seq+ 58656 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BIRC6-SLC30A6 BIRC6 chr2 32582554 - SLC30A6 chr2 32396356 + Exonic hg19 UCEC TCGA-AX-A3GI-01A 13 5 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 58657 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BIRC6-SLC30A6 BIRC6 chr2 32774548 - SLC30A6 chr2 32409342 + Exonic hg19 UCS TCGA-N6-A4V9-01A 30 6 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 58658 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BIRC6-SPAST BIRC6 chr2 32631625 - SPAST chr2 32339707 + Exonic hg19 TGCT TCGA-2G-AAGA-01A 2 1 In-Frame Intra-chr p22.3 p22.3 Seq+ 58659 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BIRC6-SPAST BIRC6 chr2 32658872 - SPAST chr2 32323865 + Exonic hg19 SKCM TCGA-ER-A3EV-06A 3 2 In-Frame Intra-chr p22.3 p22.3 Seq+ 58660 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BIRC6-SPAST BIRC6 chr2 32774548 - SPAST chr2 32372287 + Exonic hg19 HNSC TCGA-F7-A624-01A 6 9 In-Frame Intra-chr p22.3 p22.3 Seq+ 58661 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BIRC6-YIPF4 BIRC6 chr2 32582554 - YIPF4 chr2 32515552 + Exonic hg19 LUSC TCGA-43-8115-01A 7 4 In-Frame Intra-chr p22.3 p22.3 Seq+ 58662 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BIRC6-YIPF4 BIRC6 chr2 32664754 - YIPF4 chr2 32515552 + Exonic hg19 LUAD TCGA-67-3771-01A 6 4 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 58663 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BIRC7-ZNF200 BIRC7 chr20 61870962 - ZNF200 chr16 3285360 - Exonic hg19 SKCM TCGA-EE-A2GK-06A 7 8 Out-of-frame Inter-chr q13.33 p13.3 Transcription factor Seq+ 58664 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BLM-ABHD2 BLM chr15 91260671 - ABHD2 chr15 89694908 + Exonic hg19 STAD TCGA-CG-4449-01A 7 53 5'UTR-CDS Intra-chr q26.1 Oncogene Tumor suppressor gene q26.1 Seq+ 58665 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BLMH-ABCA9 BLMH chr17 28612406 - ABCA9 chr17 66992155 - Exonic hg19 SARC TCGA-QQ-A5VA-01A 3 3 In-Frame Intra-chr q11.2 q24.2 Seq+ 58666 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BLNK-PIK3AP1 BLNK chr10 97976409 - PIK3AP1 chr10 98388250 - Exonic hg19 BRCA TCGA-S3-A6ZF-01A 8 12 In-Frame Intra-chr q24.1 Oncogene Tumor suppressor gene q24.1 Seq+ 58667 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BLNK-ZNF536 BLNK chr10 98002491 - ZNF536 chr19 31025754 + Exonic hg19 BRCA TCGA-A8-A08I-01A 11 3 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q12 Transcription factor Seq+ 58668 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BLZF1-BRP44 BLZF1 chr1 169338788 - BRP44 chr1 167893775 - Exonic hg19 BRCA TCGA-AR-A0TT-01A 2 1 In-Frame Intra-chr q24.2 58669 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BMP2-TRIB3 BMP2 chr20 6749522 - TRIB3 chr20 368655 + Exonic hg19 LGG TCGA-DU-8163-01A 2 1 3'UTR-5'UTR Intra-chr p12.3 Tumor suppressor gene p13 58670 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BMP2K-ANXA3 BMP2K chr4 79697875 - ANXA3 chr4 79494334 + Exonic hg19 UCEC TCGA-PG-A914-01A 4 3 Out-of-frame Intra-chr q21.21 q21.21 Seq+ 58671 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BMP2K-SHROOM3 BMP2K chr4 79697875 - SHROOM3 chr4 77476762 + Exonic hg19 LUAD TCGA-78-7535-01A 4 2 Out-of-frame Intra-chr q21.21 q21.1 58672 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BMP2K-SLC25A31 BMP2K chr4 79786874 - SLC25A31 chr4 128694541 + Exonic hg19 LUAD TCGA-55-1592-01A 46 24 Out-of-frame Intra-chr q21.21 q28.1 Seq+ 58673 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BMP5-COL21A1 BMP5 chr6 55739174 - COL21A1 chr6 55966323 - Exonic hg19 LUAD TCGA-49-4488-01A 4 1 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 58674 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BMP7-MACROD2 BMP7 chr20 55777531 - MACROD2 chr20 15412050 + Exonic hg19 BLCA TCGA-GU-A42Q-01A 5 5 Out-of-frame Intra-chr q13.31 p12.1 Seq+ 58675 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BMP7-PIGU BMP7 chr20 55840761 - PIGU chr20 33176411 - Exonic hg19 LUSC TCGA-85-8664-01A 10 6 Out-of-frame Intra-chr q13.31 q11.22 Seq+ 58676 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BMP7-RBM38 BMP7 chr20 55749987 - RBM38 chr20 55982599 + Exonic hg19 OV TCGA-24-2288-01A 4 21 Out-of-frame Intra-chr q13.31 q13.31 Tumor suppressor gene Seq+ 58677 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BMPR1A-C10orf11 BMPR1A chr10 88659883 - C10orf11 chr10 77818424 + Exonic hg19 UCEC TCGA-EY-A3L3-01A 105 178 In-Frame Intra-chr q23.2 TKL:STKR Oncogene Tumor suppressor gene Seq+ 58678 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BMPR1A-ENTPD1 BMPR1A chr10 88659883 - ENTPD1 chr10 97604233 + Exonic hg19 PRAD TCGA-HC-7231-01A 19 26 In-Frame Intra-chr q23.2 TKL:STKR Oncogene Tumor suppressor gene q24.1 Seq+ 58679 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BMPR1B-DDAH1 BMPR1B chr4 96025718 - DDAH1 chr1 85824530 - Exonic hg19 KIRC TCGA-B0-4698-01A 3 4 Out-of-frame Inter-chr q22.3 TKL:STKR p22.3 58680 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BMPR1B-ETV1 BMPR1B chr4 95679219 - ETV1 chr7 14028764 - Exonic hg19 PRAD TCGA-SU-A7E7-01A 11 41 5'UTR-5'UTR Inter-chr q22.3 TKL:STKR p21.2 Oncogene Transcription factor Seq+ 58681 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BMPR1B-MCC BMPR1B chr4 95917285 - MCC chr5 112406931 - Exonic hg19 BRCA TCGA-A2-A0ET-01A 12 9 5'UTR-CDS Inter-chr q22.3 TKL:STKR q22.2 Tumor suppressor gene Seq+ 58682 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BMPR1B-PDLIM5 BMPR1B chr4 95679219 - PDLIM5 chr4 95561427 + Exonic hg19 PRAD TCGA-EJ-7330-01A 9 20 5'UTR-CDS Intra-chr q22.3 TKL:STKR q22.3 Seq+ 58683 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BMPR1B-PDLIM5 BMPR1B chr4 95679219 - PDLIM5 chr4 95444875 + Exonic hg19 PRAD TCGA-HC-A4ZV-01A 2 1 5'UTR-5'UTR Intra-chr q22.3 TKL:STKR q22.3 Seq+ 58684 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BMPR2-AC079354.1 BMPR2 chr2 203242273 - AC079354.1 chr2 203003155 + Exonic hg19 LUAD TCGA-55-7911-01A 12 6 Out-of-frame Intra-chr q33.1 TKL:STKR Tumor suppressor gene q33.1 58685 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BMPR2-ATG4B BMPR2 chr2 203332412 - ATG4B chr2 242590425 + Exonic hg19 LUSC TCGA-63-6202-01A 10 1 3'UTR-CDS Intra-chr q33.1 TKL:STKR Tumor suppressor gene q37.3 58686 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BMPR2-C2orf67 BMPR2 chr2 203242273 - C2orf67 chr2 210962931 - Exonic hg19 LUAD TCGA-78-7539-01A 28 16 Out-of-frame Intra-chr q33.1 TKL:STKR Tumor suppressor gene 58687 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BMPR2-MARCH4 BMPR2 chr2 203407170 - 2019_ 3_ 4_ chr2 217124402 - Exonic hg19 PRAD TCGA-HC-8258-01A 27 13 Out-of-frame Intra-chr q33.1 TKL:STKR Tumor suppressor gene q35 Seq+ 58688 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BMPR2-NOP58 BMPR2 chr2 203242273 - NOP58 chr2 203139836 + Exonic hg19 UCS TCGA-NA-A4R1-01A 59 32 3'UTR-CDS Intra-chr q33.1 TKL:STKR Tumor suppressor gene q33.1 Seq+ 58689 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BMS1-PHYHIPL BMS1 chr10 43297666 - PHYHIPL chr10 60996243 + Exonic hg19 PRAD TCGA-KK-A7AU-01A 6 5 Out-of-frame Intra-chr q11.21 q21.1 Seq+ 58690 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BMS1-PLEKHA7 BMS1 chr10 43297666 - PLEKHA7 chr11 16892729 - Exonic hg19 BRCA TCGA-AN-A0FZ-01A 5 4 Out-of-frame Inter-chr q11.21 p15.1 Seq+ 58691 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BOK-MYEOV2 BOK chr2 242501891 - MYEOV2 chr2 241066357 - Exonic hg19 BRCA TCGA-A8-A084-01A 7 5 Out-of-frame Intra-chr q37.3 Seq+ 58692 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BOP1-CPSF1 BOP1 chr8 145500212 - CPSF1 chr8 145620570 - Exonic hg19 STAD TCGA-BR-8373-01A 4 10 In-Frame Intra-chr q24.3 q24.3 58693 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BOP1-CYHR1 BOP1 chr8 145512776 - CYHR1 chr8 145690479 - Exonic hg19 BRCA TCGA-BH-A0E0-01A 5 4 CDS-5'UTR Intra-chr q24.3 q24.3 Seq+ 58694 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BOP1-NECAB1 BOP1 chr8 145500212 - NECAB1 chr8 91813919 + Exonic hg19 SARC TCGA-DX-A6YX-01A 29 78 In-Frame Intra-chr q24.3 q21.3 Seq+ 58695 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BOP1-NIPAL2 BOP1 chr8 145514954 - NIPAL2 chr8 99234828 - Exonic hg19 LGG TCGA-HT-7475-01A 3 2 Out-of-frame Intra-chr q24.3 q22.2 Seq+ 58696 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BOP1-TONSL BOP1 chr8 145500212 - TONSL chr8 145655920 - Exonic hg19 STAD TCGA-VQ-A91N-01A 2 49 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 58697 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BPHL-C6orf125 BPHL chr6 3119081 - C6orf125 chr6 33665527 - Exonic hg19 PCPG TCGA-RW-A686-01A 9 5 Out-of-frame Intra-chr p25.2 58698 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BPHL-C6orf125 BPHL chr6 3119081 - C6orf125 chr6 33665527 - Exonic hg19 PCPG TCGA-RW-A686-06A 15 6 Out-of-frame Intra-chr p25.2 58699 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BPIFA1-CLDN7 BPIFA1 chr20 31831115 - CLDN7 chr17 7166264 - Exonic hg19 LUAD TCGA-78-7159-01A 2 2 3'UTR-5'UTR Inter-chr q11.21 p13.1 58700 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BPIFA1-CLDN7 BPIFA1 chr20 31831115 - CLDN7 chr17 7166264 - Exonic hg19 LUAD TCGA-80-5608-01A 2 2 3'UTR-5'UTR Inter-chr q11.21 p13.1 58701 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BPIFB1-SNAPC5 BPIFB1 chr20 31879794 - SNAPC5 chr15 66787757 - Exonic hg19 BRCA TCGA-E2-A14V-01A 3 3 In-Frame Inter-chr q11.21 q22.31 Transcription factor Seq+ 58702 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BPTF-ABCC3 BPTF chr17 65850878 - ABCC3 chr17 48733193 + Exonic hg19 BRCA TCGA-D8-A27N-01A 8 6 Out-of-frame Intra-chr q24.2 Transcription factor q21.33 Seq+ 58703 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BPTF-BCAS3 BPTF chr17 65936772 - BCAS3 chr17 59445688 + Exonic hg19 LUAD TCGA-67-6217-01A 6 2 Out-of-frame Intra-chr q24.2 Transcription factor q23.2 Seq+ 58704 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BPTF-CCDC40 BPTF chr17 65928135 - CCDC40 chr17 78021078 + Exonic hg19 BRCA TCGA-E2-A15H-01A 23 5 Out-of-frame Intra-chr q24.2 Transcription factor q25.3 Seq+ 58705 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BPTF-FAM117A BPTF chr17 65962772 - FAM117A chr17 47797798 - Exonic hg19 BRCA TCGA-E2-A14V-01A 55 60 Out-of-frame Intra-chr q24.2 Transcription factor q21.33 Seq+ 58706 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BPTF-NOL11 BPTF chr17 65944422 - NOL11 chr17 65715790 + Exonic hg19 TGCT TCGA-2G-AAKL-01A 11 18 In-Frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 58707 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BPTF-NOL11 BPTF chr17 65822453 - NOL11 chr17 65739595 + Exonic hg19 SKCM TCGA-ER-A19W-06A 25 3 Out-of-frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 58708 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BPTF-NOL11 BPTF chr17 65862803 - NOL11 chr17 65739859 + Exonic hg19 UCS TCGA-N8-A56S-01A 15 5 Out-of-frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 58709 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BPTF-PIP4K2B BPTF chr17 65822453 - PIP4K2B chr17 36943173 - Exonic hg19 BRCA TCGA-C8-A12P-01A 58 24 Out-of-frame Intra-chr q24.2 Transcription factor q12 Seq+ 58710 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BPTF-PITPNC1 BPTF chr17 65850878 - PITPNC1 chr17 65665624 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 11 5 Out-of-frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 58711 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BPTF-PITPNC1 BPTF chr17 65936772 - PITPNC1 chr17 65665624 + Exonic hg19 BRCA TCGA-BH-A1F6-01A 142 65 In-Frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 58712 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BPTF-PITPNC1 BPTF chr17 65871136 - PITPNC1 chr17 65628259 + Exonic hg19 STAD TCGA-BR-4357-01A 3 5 Out-of-frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 58713 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BPTF-PITPNC1 BPTF chr17 65944422 - PITPNC1 chr17 65665624 + Exonic hg19 BRCA TCGA-GI-A2C9-01A 36 12 In-Frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 58714 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BPTF-PITPNC1 BPTF chr17 65871136 - PITPNC1 chr17 65671595 + Exonic hg19 MESO TCGA-NQ-A57I-01A 3 2 Out-of-frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 58715 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BPTF-PLXDC1 BPTF chr17 65962772 - PLXDC1 chr17 37243955 - Exonic hg19 BRCA TCGA-3C-AALI-01A 7 7 In-Frame Intra-chr q24.2 Transcription factor q12 Seq+ 58716 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BPTF-RAD17 BPTF chr17 65871860 - RAD17 chr5 68692224 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 17 14 Out-of-frame Inter-chr q24.2 Transcription factor Seq+ 58717 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BPTF-RGS9 BPTF chr17 65850878 - RGS9 chr17 63164318 + Exonic hg19 BRCA TCGA-E9-A22D-01A 241 176 In-Frame Intra-chr q24.2 Transcription factor q24.1 Seq+ 58718 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BPTF-RP11-113D6.10 BPTF chr17 65822453 - RP11-113D6.10 chr11 18234628 + Exonic hg19 ESCA TCGA-R6-A6Y0-01B 3 3 Out-of-frame Inter-chr q24.2 Transcription factor 58719 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BPTF-TTYH2 BPTF chr17 65822453 - TTYH2 chr17 72227027 + Exonic hg19 BLCA TCGA-ZF-A9RE-01A 3 6 Out-of-frame Intra-chr q24.2 Transcription factor q25.1 Seq+ 58720 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRAF-AGK BRAF chr7 140500162 - AGK chr7 141292946 + Exonic hg19 SKCM TCGA-DA-A1IA-06A 10 13 In-Frame Intra-chr q34 TKL:RAF Oncogene Seq+ 58721 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRAF-AGK BRAF chr7 140500162 - AGK chr7 141292946 + Exonic hg19 THCA TCGA-DJ-A2PX-01A 20 23 In-Frame Intra-chr q34 TKL:RAF Oncogene Seq+ 58722 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRAF-AP3B1 BRAF chr7 140494108 - AP3B1 chr5 77335098 - Exonic hg19 THCA TCGA-EL-A3T0-01A 61 35 In-Frame Inter-chr q34 TKL:RAF Oncogene q14.1 Seq+ 58723 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRAF-ATG7 BRAF chr7 140507760 - ATG7 chr3 11596285 + Exonic hg19 SKCM TCGA-BF-A5EP-01A 84 87 In-Frame Inter-chr q34 TKL:RAF Oncogene p25.3 Seq+ 58724 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRAF-C7orf10 BRAF chr7 140624366 - C7orf10 chr7 40789033 + Exonic hg19 THCA TCGA-FY-A40N-01A 219 43 In-Frame Intra-chr q34 TKL:RAF Oncogene Seq+ 58725 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRAF-CIITA BRAF chr7 140487348 - CIITA chr16 10995371 + Exonic hg19 THCA TCGA-EM-A3AQ-01A 4 2 In-Frame Inter-chr q34 TKL:RAF Oncogene p13.13 58726 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRAF-CUL1 BRAF chr7 140549911 - CUL1 chr7 148427054 + Exonic hg19 KIRP TCGA-5P-A9JZ-01A 7 7 CDS-5'UTR Intra-chr q34 TKL:RAF Oncogene q36.1 Tumor suppressor gene Seq+ 58727 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRAF-CUX1 BRAF chr7 140500162 - CUX1 chr7 101801840 + Exonic hg19 PAAD TCGA-F2-A44H-01A 2 2 In-Frame Intra-chr q34 TKL:RAF Oncogene q22.1 Tumor suppressor gene Transcription factor 58728 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRAF-FAM114A2 BRAF chr7 140482821 - FAM114A2 chr5 153382529 - Exonic hg19 THCA TCGA-ET-A3BN-01A 78 38 In-Frame Inter-chr q34 TKL:RAF Oncogene q33.2 Seq+ 58729 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRAF-HIBADH BRAF chr7 140500162 - HIBADH chr7 27582719 - Exonic hg19 SKCM TCGA-BF-A5EP-01A 2 2 Out-of-frame Intra-chr q34 TKL:RAF Oncogene p15.2 Seq+ 58730 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRAF-MACF1 BRAF chr7 140494108 - MACF1 chr1 39898207 + Exonic hg19 THCA TCGA-DE-A0Y2-01A 31 15 In-Frame Inter-chr q34 TKL:RAF Oncogene p34.3 Seq+ 58731 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRAF-MRPS33 BRAF chr7 140624366 - MRPS33 chr7 140710460 - Exonic hg19 BLCA TCGA-K4-A3WV-01A 36 7 CDS-5'UTR Intra-chr q34 TKL:RAF Oncogene q34 Seq+ 58732 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRAF-MRPS33 BRAF chr7 140624366 - MRPS33 chr7 140710460 - Exonic hg19 STAD TCGA-VQ-A8E2-01A 3 29 CDS-5'UTR Intra-chr q34 TKL:RAF Oncogene q34 Seq+ 58733 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRAF-SLC26A4 BRAF chr7 140534409 - SLC26A4 chr7 107323647 + Exonic hg19 LUSC TCGA-22-1002-01A 5 1 In-Frame Intra-chr q34 TKL:RAF Oncogene q22.3 58734 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRAF-SND1 BRAF chr7 140487348 - SND1 chr7 127724776 + Exonic hg19 THCA TCGA-EL-A3ZK-01A 57 56 In-Frame Intra-chr q34 TKL:RAF Oncogene q32.1 Seq+ 58735 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRAF-TRIM24 BRAF chr7 140624366 - TRIM24 chr7 138258252 + Exonic hg19 READ TCGA-F5-6464-01A 7 1 In-Frame Intra-chr q34 TKL:RAF Oncogene q33 Oncogene Tumor suppressor gene 58736 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRAP-C12orf24 BRAP chr12 112103443 - C12orf24 chr12 110927824 + Exonic hg19 LUSC TCGA-18-4083-01A 211 82 Out-of-frame Intra-chr q24.12 58737 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRAP-CCDC108 BRAP chr12 112116955 - CCDC108 chr2 219884441 - Exonic hg19 UCEC TCGA-AJ-A6NU-01A 8 2 Out-of-frame Inter-chr q24.12 58738 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRAP-KLRB1 BRAP chr12 112123515 - KLRB1 chr12 9754195 - Exonic hg19 LGG TCGA-RY-A83Z-01A 19 13 In-Frame Intra-chr q24.12 p13.31 Seq+ 58739 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRCA1-NF1 BRCA1 chr17 41199660 - NF1 chr17 29654517 + Exonic hg19 PRAD TCGA-2A-A8W1-01A 2 2 Out-of-frame Intra-chr q21.31 Oncogene Tumor suppressor gene q11.2 Oncogene Tumor suppressor gene Seq+ 58740 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRCC3-FAM50A BRCC3 chrX 154306978 - FAM50A chrX 153673981 + Exonic hg19 ESCA TCGA-LN-A49L-01A 3 51 Out-of-frame Intra-chr q28 q28 Seq+ 58741 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRD1-APOL5 BRD1 chr22 50187682 - APOL5 chr22 36125401 + Exonic hg19 LUAD TCGA-MP-A4TI-01A 15 10 CDS-3'UTR Intra-chr q13.33 q12.3 Seq+ 58742 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRD1-MAPK12 BRD1 chr22 50181038 - MAPK12 chr22 50696730 - Exonic hg19 GBM TCGA-06-0648-01A 37 64 Out-of-frame Intra-chr q13.33 q13.33 58743 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRD1-MLC1 BRD1 chr22 50187682 - MLC1 chr22 50523390 - Exonic hg19 LUAD TCGA-44-7660-01A 2 1 CDS-5'UTR Intra-chr q13.33 q13.33 58744 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRD1-RTN4RL1 BRD1 chr22 50197852 - RTN4RL1 chr17 1841102 - Exonic hg19 PRAD TCGA-KC-A4BL-01A 3 1 Out-of-frame Inter-chr q13.33 p13.3 58745 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRD4-AKAP8L BRD4 chr19 15443101 - AKAP8L chr19 15491423 - Exonic hg19 LIHC TCGA-BC-A10R-01A 3 38 5'UTR-CDS Intra-chr p13.12 Atypical:BRD p13.12 Transcription factor Seq+ 58746 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRD4-AKAP8L BRD4 chr19 15443101 - AKAP8L chr19 15514853 - Exonic hg19 PRAD TCGA-EJ-8469-01A 2 13 5'UTR-CDS Intra-chr p13.12 Atypical:BRD p13.12 Transcription factor Seq+ 58747 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRD4-CSN2 BRD4 chr19 15443101 - CSN2 chr4 70826725 - Exonic hg19 CESC TCGA-C5-A7X5-01A 4 76 Out-of-frame Inter-chr p13.12 Atypical:BRD Tumor suppressor gene Seq+ 58748 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRD4-ZC3H15 BRD4 chr19 15443101 - ZC3H15 chr2 187367223 + Exonic hg19 STAD TCGA-HU-A4GH-01A 4 85 5'UTR-CDS Inter-chr p13.12 Atypical:BRD q32.1 Seq+ 58749 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRD9-CBFB BRD9 chr5 884053 - CBFB chr16 67063630 + Exonic hg19 LUSC TCGA-77-7138-01A 4 4 In-Frame Inter-chr p15.33 q22.1 Seq+ 58750 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRD9-CEP72 BRD9 chr5 891270 - CEP72 chr5 647920 + Exonic hg19 LUSC TCGA-90-6837-01A 42 12 In-Frame Intra-chr p15.33 Seq+ 58751 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRD9-STARD3 BRD9 chr5 876216 - STARD3 chr17 37813261 + Exonic hg19 ESCA TCGA-R6-A8W5-01B 82 915 In-Frame Inter-chr p15.33 q12 Seq+ 58752 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRD9-TERT BRD9 chr5 892721 - TERT chr5 1282739 - Exonic hg19 KIRP TCGA-2Z-A9J2-01A 2 1 In-Frame Intra-chr p15.33 p15.33 Oncogene Seq+ 58753 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRD9-TERT BRD9 chr5 891270 - TERT chr5 1282739 - Exonic hg19 ESCA TCGA-R6-A8W5-01B 6 17 In-Frame Intra-chr p15.33 p15.33 Oncogene Seq+ 58754 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRE-AC013480.1 BRE chr2 28352247 - AC013480.1 chr2 42165753 - Exonic hg19 BRCA TCGA-OL-A5D8-01A 5 3 Out-of-frame Intra-chr p21 58755 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRE-DTNB BRE chr2 28352247 - DTNB chr2 25678363 - Exonic hg19 BLCA TCGA-G2-A2EC-01A 30 11 In-Frame Intra-chr p23.3 Seq+ 58756 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRE-GPN1 BRE chr2 28152775 - GPN1 chr2 27872982 + Exonic hg19 UCEC TCGA-B5-A0JN-01A 4 8 In-Frame Intra-chr p23.3 Seq+ 58757 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRE-GPN1 BRE chr2 28117551 - GPN1 chr2 27870703 + Exonic hg19 UCS TCGA-N9-A4Q1-01A 21 8 Out-of-frame Intra-chr p23.3 Seq+ 58758 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRE-PRKCE BRE chr2 28268666 - PRKCE chr2 46313347 + Exonic hg19 BRCA TCGA-C8-A134-01A 13 24 In-Frame Intra-chr p21 Tumor suppressor gene Seq+ 58759 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRE-PTPN1 BRE chr2 28248287 - PTPN1 chr20 49191054 + Exonic hg19 BRCA TCGA-E2-A15E-06A 6 3 In-Frame Inter-chr q13.13 Tumor suppressor gene Seq+ 58760 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRF1-FOXN3 BRF1 chr14 105713408 - FOXN3 chr14 89878834 - Exonic hg19 BRCA TCGA-A8-A08I-01A 12 11 5'UTR-5'UTR Intra-chr q32.33 Tumor suppressor gene q32.11 Transcription factor Seq+ 58761 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRF2-C8orf86 BRF2 chr8 37706114 - C8orf86 chr8 38370157 - Exonic hg19 COAD TCGA-AZ-6607-01A 7 4 Out-of-frame Intra-chr p11.23 Tumor suppressor gene Transcription factor p11.22 Seq+ 58762 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRF2-KHDRBS2 BRF2 chr8 37704372 - KHDRBS2 chr6 62757899 - Exonic hg19 COAD TCGA-CA-6719-01A 2 3 Out-of-frame Inter-chr p11.23 Tumor suppressor gene Transcription factor q11.1 58763 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRI3BP-IL22 BRI3BP chr12 125478549 - IL22 chr12 68647274 - Exonic hg19 COAD TCGA-AA-3660-01A 2 2 Out-of-frame Intra-chr q24.31 q15 Seq+ 58764 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRIP1-CUEDC1 BRIP1 chr17 59853762 - CUEDC1 chr17 55963240 - Exonic hg19 BRCA TCGA-C8-A275-01A 2 1 CDS-5'UTR Intra-chr q23.2 Oncogene q22 Seq+ 58765 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRK1-FANCD2 BRK1 chr3 10157503 - FANCD2 chr3 10138010 + Exonic hg19 ACC TCGA-OR-A5K5-01A 47 27 Out-of-frame Intra-chr p25.3 p25.3 Oncogene Seq+ 58766 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRK1-PTP4A2 BRK1 chr3 10168601 - PTP4A2 chr1 32374561 - Exonic hg19 PRAD TCGA-CH-5766-01A 2 6 3'UTR-CDS Inter-chr p25.3 p35.2 58767 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRMS1L-NPAS3 BRMS1L chr14 36302311 - NPAS3 chr14 34029327 + Exonic hg19 SARC TCGA-DX-A8BT-01A 3 1 Out-of-frame Intra-chr q13.2 q13.1 Transcription factor Seq+ 58768 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRMS1L-ZNF839 BRMS1L chr14 36304129 - ZNF839 chr14 102805153 + Exonic hg19 ACC TCGA-OR-A5KW-01A 13 4 In-Frame Intra-chr q13.2 q32.31 Seq+ 58769 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BROX-SUSD4 BROX chr1 222886284 - SUSD4 chr1 223532463 - Exonic hg19 SARC TCGA-DX-A2J0-01A 7 1 Out-of-frame Intra-chr q41 q41 Seq+ 58770 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRP44-DNM3 BRP44 chr1 167904971 - DNM3 chr1 172356273 + Exonic hg19 SARC TCGA-DX-A6BG-01A 19 20 Out-of-frame Intra-chr q24.3 58771 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRP44-NUDT12 BRP44 chr1 167904971 - NUDT12 chr5 102895955 - Exonic hg19 SARC TCGA-DX-A6BG-01A 25 12 CDS-5'UTR Inter-chr q21.2 58772 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRPF3-HLA-DMA BRPF3 chr6 36172591 - HLA-DMA chr6 32918580 - Exonic hg19 BRCA TCGA-E2-A1B0-01A 4 6 Out-of-frame Intra-chr p21.31 58773 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRPF3-STARD9 BRPF3 chr6 36185787 - STARD9 chr15 42987941 + Exonic hg19 GBM TCGA-76-4925-01A 2 6 Out-of-frame Inter-chr p21.31 q15.2 Seq+ 58774 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRPF3-UNC119B BRPF3 chr6 36164747 - UNC119B chr12 121157723 + Exonic hg19 SARC TCGA-PC-A5DN-01A 3 3 5'UTR-CDS Inter-chr p21.31 q24.31 58775 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRPF3-ZFAND3 BRPF3 chr6 36185787 - ZFAND3 chr6 37897735 + Exonic hg19 LUAD TCGA-05-4418-01A 2 1 In-Frame Intra-chr p21.31 p21.2 58776 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRWD1-ABCA10 BRWD1 chr21 40619627 - ABCA10 chr17 67184020 - Exonic hg19 BRCA TCGA-AC-A6IW-01A 2 2 Out-of-frame Inter-chr q22.2 q24.3 Seq+ 58777 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRWD1-ABCG1 BRWD1 chr21 40665737 - ABCG1 chr21 43645781 + Exonic hg19 BRCA TCGA-E9-A1NF-01A 4 2 In-Frame Intra-chr q22.2 q22.3 Seq+ 58778 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRWD1-DYRK1A BRWD1 chr21 40581921 - DYRK1A chr21 38844986 + Exonic hg19 BRCA TCGA-A2-A0CW-01A 7 13 Out-of-frame Intra-chr q22.2 q22.13 CMGC:DYRK Seq+ 58779 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRWD1-HUNK BRWD1 chr21 40641825 - HUNK chr21 33340562 + Exonic hg19 LUAD TCGA-05-4398-01A 2 2 Out-of-frame Intra-chr q22.2 q22.11 CAMK:CAMKL Seq+ 58780 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRWD1-LCA5L BRWD1 chr21 40585407 - LCA5L chr21 40801137 - Exonic hg19 BRCA TCGA-A8-A08P-01A 4 7 CDS-5'UTR Intra-chr q22.2 q22.2 Seq+ 58781 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRWD1-RAPGEF4 BRWD1 chr21 40670358 - RAPGEF4 chr2 173913328 + Exonic hg19 PRAD TCGA-HC-7081-01A 44 35 Out-of-frame Inter-chr q22.2 q31.1 Seq+ 58782 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRWD1-SMC1A BRWD1 chr21 40568424 - SMC1A chrX 53442118 - Exonic hg19 LUAD TCGA-55-6987-01A 5 2 In-Frame Inter-chr q22.2 p11.22 Seq+ 58783 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRWD1-WDR4 BRWD1 chr21 40608521 - WDR4 chr21 44283706 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 2 5 Out-of-frame Intra-chr q22.2 q22.3 Seq+ 58784 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRWD1-WRB BRWD1 chr21 40572145 - WRB chr21 40762624 + Exonic hg19 PAAD TCGA-3E-AAAY-01A 2 2 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 58785 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRWD3-FAM155A BRWD3 chrX 80047353 - FAM155A chr13 107823134 - Exonic hg19 HNSC TCGA-QK-A8ZB-01A 27 18 In-Frame Inter-chr q21.1 q33.3 Seq+ 58786 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BRWD3-LRCH2 BRWD3 chrX 80064038 - LRCH2 chrX 114391230 - Exonic hg19 CESC TCGA-ZJ-AAX4-01A 5 3 Out-of-frame Intra-chr q21.1 q23 Seq+ 58787 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BSDC1-YARS BSDC1 chr1 32852380 - YARS chr1 33276658 - Exonic hg19 BRCA TCGA-C8-A26X-01A 19 21 In-Frame Intra-chr p35.1 p35.1 Seq+ 58788 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BSDC1-ZMYM4 BSDC1 chr1 32859681 - ZMYM4 chr1 35824526 + Exonic hg19 COAD TCGA-A6-5664-01A 2 1 Out-of-frame Intra-chr p35.1 p34.3 Seq+ 58789 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BSG-ARFGEF2 BSG chr19 583492 - ARFGEF2 chr20 47615777 + Exonic hg19 LGG TCGA-DU-5851-01A 2 5 Out-of-frame Inter-chr p13.3 q13.13 58790 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BSG-CCT5 BSG chr19 583492 - CCT5 chr5 10250033 + Exonic hg19 UCEC TCGA-EO-A3B0-01A 2 5 Out-of-frame Inter-chr p13.3 p15.2 58791 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BSG-EEA1 BSG chr19 583492 - EEA1 chr12 93229203 - Exonic hg19 THCA TCGA-EM-A3AL-01A 2 2 Out-of-frame Inter-chr p13.3 q22 Transcription factor 58792 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BSG-NCALD BSG chr19 583492 - NCALD chr8 102813898 - Exonic hg19 KICH TCGA-KL-8339-01A 2 2 Out-of-frame Inter-chr p13.3 q22.3 58793 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BSG-PLEKHB2 BSG chr19 583492 - PLEKHB2 chr2 131876464 + Exonic hg19 LUAD TCGA-50-6673-01A 2 1 Out-of-frame Inter-chr p13.3 q21.1 58794 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BSG-STAT6 BSG chr19 583492 - STAT6 chr12 57496773 - Exonic hg19 ACC TCGA-OR-A5J9-01A 2 19 Out-of-frame Inter-chr p13.3 q13.3 Transcription factor 58795 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BSN-ARL8B BSN chr3 49680585 - ARL8B chr3 5212188 + Exonic hg19 LGG TCGA-DU-6396-01A 12 5 In-Frame Intra-chr p21.31 p26.1 Seq+ 58796 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BSPRY-NPM1 BSPRY chr9 116123017 - NPM1 chr5 170837531 + Exonic hg19 BRCA TCGA-LL-A5YO-01A 8 39 In-Frame Inter-chr q32 q35.1 Oncogene Tumor suppressor gene Seq+ 58797 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTAF1-HOGA1 BTAF1 chr10 93713630 - HOGA1 chr10 99361614 + Exonic hg19 SARC TCGA-JV-A75J-01A 13 8 Out-of-frame Intra-chr q23.32 q24.2 Seq+ 58798 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTAF1-PTPRR BTAF1 chr10 93726514 - PTPRR chr12 71095103 - Exonic hg19 PRAD TCGA-EJ-5510-01A 5 5 Out-of-frame Inter-chr q23.32 q15 Seq+ 58799 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTBD1-BBOX1 BTBD1 chr15 83710480 - BBOX1 chr11 27114715 + Exonic hg19 CESC TCGA-VS-A9UO-01A 169 121 In-Frame Inter-chr q25.2 p14.2 Seq+ 58800 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTBD1-MESP1 BTBD1 chr15 83710480 - MESP1 chr15 90293458 - Exonic hg19 BRCA TCGA-BH-A0BP-01A 39 14 Out-of-frame Intra-chr q25.2 q26.1 Transcription factor Seq+ 58801 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTBD1-MRPL46 BTBD1 chr15 83725141 - MRPL46 chr15 89009004 - Exonic hg19 LUSC TCGA-66-2758-01A 210 91 In-Frame Intra-chr q25.2 q25.3 Seq+ 58802 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTBD10-PTH BTBD10 chr11 13484639 - PTH chr11 13514407 - Exonic hg19 LUSC TCGA-LA-A7SW-01A 24 2 5'UTR-5'UTR Intra-chr p15.3 p15.3 Seq+ 58803 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTBD11-CMKLR1 BTBD11 chr12 107975081 - CMKLR1 chr12 108687441 - Exonic hg19 SARC TCGA-DX-A3U5-01A 19 19 CDS-5'UTR Intra-chr q23.3 q23.3 Seq+ 58804 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTBD2-AMZ2 BTBD2 chr19 2015296 - AMZ2 chr17 66244781 + Exonic hg19 THYM TCGA-ZB-A96L-01A 80 86 CDS-5'UTR Inter-chr p13.3 q24.2 Seq+ 58805 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTBD2-DOT1L BTBD2 chr19 2015296 - DOT1L chr19 2226182 + Exonic hg19 COAD TCGA-AA-3511-01A 2 1 Out-of-frame Intra-chr p13.3 p13.3 Oncogene Transcription factor Seq+ 58806 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTBD2-GTSE1 BTBD2 chr19 1987165 - GTSE1 chr22 46719087 + Exonic hg19 UCS TCGA-NA-A4R1-01A 43 36 Out-of-frame Inter-chr p13.3 q13.31 Seq+ 58807 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTBD2-KIAA1109 BTBD2 chr19 1990003 - KIAA1109 chr4 123107191 + Exonic hg19 SARC TCGA-DX-A3U5-01A 17 15 In-Frame Inter-chr p13.3 q27 Seq+ 58808 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTBD2-LINGO3 BTBD2 chr19 2015296 - LINGO3 chr19 2291821 - Exonic hg19 LGG TCGA-HT-7475-01A 9 2 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 58809 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTBD2-MOBKL2A BTBD2 chr19 2015296 - MOBKL2A chr19 2078678 - Exonic hg19 UCEC TCGA-AX-A2H4-01A 3 2 Out-of-frame Intra-chr p13.3 58810 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTBD2-OAS2 BTBD2 chr19 1993019 - OAS2 chr12 113424843 + Exonic hg19 LGG TCGA-FG-A4MU-01B 113 39 In-Frame Inter-chr p13.3 q24.13 Seq+ 58811 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTBD3-C7orf46 BTBD3 chr20 11871602 - C7orf46 chr7 23728888 + Exonic hg19 UCEC TCGA-AJ-A3IA-01A 2 3 Out-of-frame Inter-chr p12.2 58812 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTBD3-CCDC126 BTBD3 chr20 11871602 - CCDC126 chr7 23682550 + Exonic hg19 UCEC TCGA-AJ-A3IA-01A 7 5 5'UTR-CDS Inter-chr p12.2 p15.3 Seq+ 58813 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTBD3-GCNT2 BTBD3 chr20 11900484 - GCNT2 chr6 10621584 + Exonic hg19 BRCA TCGA-EW-A1PF-01A 3 4 Out-of-frame Inter-chr p12.2 p24.3 Seq+ 58814 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTBD3-MACF1 BTBD3 chr20 11871602 - MACF1 chr1 39715686 + Exonic hg19 LUSC TCGA-98-8021-01A 11 6 5'UTR-CDS Inter-chr p12.2 p34.3 Seq+ 58815 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTBD7-UBR7 BTBD7 chr14 93730131 - UBR7 chr14 93688659 + Exonic hg19 BRCA TCGA-AC-A23H-01A 24 7 Out-of-frame Intra-chr Seq+ 58816 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTBD9-ATAD1 BTBD9 chr6 38545376 - ATAD1 chr10 89574369 - Exonic hg19 BRCA TCGA-A2-A0YJ-01A 6 2 CDS-5'UTR Inter-chr p21.2 Seq+ 58817 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTBD9-C6orf127 BTBD9 chr6 38256048 - C6orf127 chr6 35754775 + Exonic hg19 BRCA TCGA-AN-A0FT-01A 2 1 Out-of-frame Intra-chr p21.2 58818 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTBD9-DNAH8 BTBD9 chr6 38545376 - DNAH8 chr6 38690552 + Exonic hg19 SKCM TCGA-EB-A5SH-06A 3 4 CDS-5'UTR Intra-chr p21.2 p21.2 58819 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTBD9-FARS2 BTBD9 chr6 38312760 - FARS2 chr6 5545413 + Exonic hg19 BRCA TCGA-A8-A0AD-01A 17 14 In-Frame Intra-chr p21.2 p25.1 Seq+ 58820 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTBD9-LASP1 BTBD9 chr6 38607576 - LASP1 chr17 37034339 + Exonic hg19 PRAD TCGA-YL-A8SA-01A 12 8 5'UTR-CDS Inter-chr p21.2 q12 Seq+ 58821 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTBD9-PLEKHB1 BTBD9 chr6 38545376 - PLEKHB1 chr11 73371798 + Exonic hg19 HNSC TCGA-QK-A8ZA-01A 7 3 Out-of-frame Inter-chr p21.2 q13.4 Seq+ 58822 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTF3L4-STMN1 BTF3L4 chr1 52530610 - STMN1 chr1 26212360 - Exonic hg19 LUAD TCGA-95-A4VN-01A 3 2 In-Frame Intra-chr p32.3 p36.11 58823 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTN2A1-HIST1H2AC BTN2A1 chr6 26466316 - HIST1H2AC chr6 26138282 + Exonic hg19 BRCA TCGA-D8-A13Z-01A 88 32 Out-of-frame Intra-chr p22.2 p22.2 Seq+ 58824 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTN2A1-HIST1H2BC BTN2A1 chr6 26463753 - HIST1H2BC chr6 26115363 - Exonic hg19 KIRC TCGA-A3-3313-01A 6 4 Out-of-frame Intra-chr p22.2 p22.2 Seq+ 58825 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTN3A2-HIST1H2AC BTN3A2 chr6 26375026 - HIST1H2AC chr6 26138282 + Exonic hg19 BRCA TCGA-E2-A109-01A 9 5 Out-of-frame Intra-chr p22.2 p22.2 Seq+ 58826 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTRC-CDH23 BTRC chr10 103113985 - CDH23 chr10 73269839 + Exonic hg19 BRCA TCGA-BH-A18U-01A 2 1 Out-of-frame Intra-chr q24.32 q22.1 58827 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTRC-HIF1AN BTRC chr10 103190209 - HIF1AN chr10 102296168 + Exonic hg19 KIRC TCGA-BP-5202-01A 6 2 In-Frame Intra-chr q24.32 q24.31 Seq+ 58828 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BTRC-MICU1 BTRC chr10 103113985 - MICU1 chr10 74326552 - Exonic hg19 ACC TCGA-OR-A5K5-01A 5 8 CDS-5'UTR Intra-chr q24.32 q22.1 Seq+ 58829 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BUB1B-EIF2AK4 BUB1B chr15 40468874 - EIF2AK4 chr15 40301815 + Exonic hg19 BRCA TCGA-AO-A128-01A 3 1 Out-of-frame Intra-chr q15.1 Oncogene q15.1 Seq+ 58830 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BUB1B-EIF2AK4 BUB1B chr15 40453456 - EIF2AK4 chr15 40314720 + Exonic hg19 BRCA TCGA-D8-A1XT-01A 26 26 Out-of-frame Intra-chr q15.1 Oncogene q15.1 Seq+ 58831 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BUB1B-EIF2AK4 BUB1B chr15 40510763 - EIF2AK4 chr15 40278006 + Exonic hg19 UCS TCGA-N8-A56S-01A 2 2 Out-of-frame Intra-chr q15.1 Oncogene q15.1 Seq+ 58832 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BUB1B-EIF2AK4 BUB1B chr15 40453456 - EIF2AK4 chr15 40321607 + Exonic hg19 BRCA TCGA-OL-A66I-01A 8 4 In-Frame Intra-chr q15.1 Oncogene q15.1 Seq+ 58833 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BUB1B-PCM1 BUB1B chr15 40462882 - PCM1 chr8 17842956 + Exonic hg19 LUSC TCGA-O2-A5IB-01A 12 9 Out-of-frame Inter-chr q15.1 Oncogene p22 Seq+ 58834 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BUD13-APOA5 BUD13 chr11 116631451 - APOA5 chr11 116661783 - Exonic hg19 BRCA TCGA-D8-A1JG-01B 15 2 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 58835 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BZW2-GAP43 BZW2 chr7 16685913 - GAP43 chr3 115439641 + Exonic hg19 STAD TCGA-RD-A7C1-01A 5 24 5'UTR-CDS Inter-chr p21.1 q13.31 Seq+ 58836 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BZW2-GUSB BZW2 chr7 16714213 - GUSB chr7 65432894 - Exonic hg19 LAML TCGA-AB-2939-03A 2 5 Out-of-frame Intra-chr p21.1 q11.21 Seq+ 58837 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BZW2-IMMP2L BZW2 chr7 16722470 - IMMP2L chr7 110303777 - Exonic hg19 COAD TCGA-AA-3492-01A 40 24 In-Frame Intra-chr p21.1 q31.1 Seq+ 58838 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq BZW2-RRM1 BZW2 chr7 16685913 - RRM1 chr11 4127276 + Exonic hg19 PRAD TCGA-V1-A9ZK-01A 2 1 5'UTR-3'UTR Inter-chr p21.1 p15.4 Oncogene 58839 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf11-ADK C10orf11 chr10 77198252 - ADK chr10 76468079 + Exonic hg19 LUSC TCGA-22-5472-01A 15 16 5'UTR-CDS Intra-chr q22.2 58840 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf11-ADK C10orf11 chr10 77198252 - ADK chr10 76285014 + Exonic hg19 UCEC TCGA-5B-A90C-01A 20 18 5'UTR-CDS Intra-chr q22.2 58841 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf11-ADK C10orf11 chr10 77198252 - ADK chr10 76285014 + Exonic hg19 BRCA TCGA-A8-A09N-01A 8 6 5'UTR-CDS Intra-chr q22.2 58842 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf11-ADK C10orf11 chr10 77198252 - ADK chr10 76153899 + Exonic hg19 UCEC TCGA-D1-A3DH-01A 6 1 5'UTR-CDS Intra-chr q22.2 58843 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf11-CYP2C19 C10orf11 chr10 77198252 - CYP2C19 chr10 96609674 + Exonic hg19 BRCA TCGA-AO-A03P-01A 4 8 5'UTR-CDS Intra-chr q23.33 Oncogene Seq+ 58844 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf11-NCRNA00245 C10orf11 chr10 77198252 - NCRNA00245 chr10 77167013 + Exonic hg19 BLCA TCGA-GV-A3QF-01A 3 2 Out-of-frame Intra-chr 58845 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf11-RTKN2 C10orf11 chr10 77198252 - RTKN2 chr10 64005816 - Exonic hg19 COAD TCGA-AD-6899-01A 4 1 5'UTR-CDS Intra-chr q21.2 58846 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf11-RUFY2 C10orf11 chr10 77198252 - RUFY2 chr10 70123870 - Exonic hg19 BRCA TCGA-LD-A7W5-01A 73 46 5'UTR-CDS Intra-chr q21.3 Seq+ 58847 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf11-VCL C10orf11 chr10 77198252 - VCL chr10 75802841 + Exonic hg19 LUAD TCGA-44-3396-01A 4 2 5'UTR-CDS Intra-chr q22.2 Seq+ 58848 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf112-C14orf126 C10orf112 chr10 19820280 - C14orf126 chr14 31917660 - Exonic hg19 LGG TCGA-FG-A4MT-01A 3 1 Out-of-frame Inter-chr 58849 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf112-GPR158 C10orf112 chr10 19572110 - GPR158 chr10 25755580 + Exonic hg19 LUAD TCGA-55-1596-01A 2 2 Out-of-frame Intra-chr p12.1 58850 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf116-SNW1 C10orf116 chr10 88730487 - SNW1 chr14 78189203 - Exonic hg19 KIRP TCGA-B9-5155-01A 2 53 Out-of-frame Inter-chr q24.3 58851 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf118-GFRA1 C10orf118 chr10 115894672 - GFRA1 chr10 117885068 - Exonic hg19 LUSC TCGA-85-8070-01A 6 2 Out-of-frame Intra-chr q25.3 58852 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf125-DOCK1 C10orf125 chr10 135171427 - DOCK1 chr10 129055599 + Exonic hg19 LUAD TCGA-78-8640-01A 3 1 Out-of-frame Intra-chr q26.2 58853 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf18-ABI1 C10orf18 chr10 5727138 - ABI1 chr10 27112234 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 8 18 Out-of-frame Intra-chr p12.1 58854 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf18-AKR1E2 C10orf18 chr10 5727138 - AKR1E2 chr10 4872867 + Exonic hg19 BLCA TCGA-XF-A8HD-01A 3 5 Out-of-frame Intra-chr p15.1 58855 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf18-NET1 C10orf18 chr10 5803434 - NET1 chr10 5498551 + Exonic hg19 BRCA TCGA-C8-A12K-01A 5 4 Out-of-frame Intra-chr p15.1 58856 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf18-NET1 C10orf18 chr10 5773166 - NET1 chr10 5493793 + Exonic hg19 STAD TCGA-CD-A4MH-01A 2 11 Out-of-frame Intra-chr p15.1 58857 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf18-NET1 C10orf18 chr10 5803434 - NET1 chr10 5471133 + Exonic hg19 BRCA TCGA-E9-A248-01A 5 2 Out-of-frame Intra-chr p15.1 58858 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf26-ADAMTS2 C10orf26 chr10 104503900 - ADAMTS2 chr5 178700065 - Exonic hg19 BRCA TCGA-AO-A1KT-01A 6 5 Out-of-frame Inter-chr 58859 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf26-ARL3 C10orf26 chr10 104503900 - ARL3 chr10 104465246 - Exonic hg19 BRCA TCGA-AR-A1AO-01A 6 4 Out-of-frame Intra-chr q24.32 58860 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf26-C6orf105 C10orf26 chr10 104557852 - C6orf105 chr6 11768616 - Exonic hg19 PRAD TCGA-VP-A87K-01A 12 6 Out-of-frame Inter-chr 58861 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf26-SFXN2 C10orf26 chr10 104569811 - SFXN2 chr10 104486369 + Exonic hg19 PAAD TCGA-2J-AABU-01A 3 1 Out-of-frame Intra-chr q24.32 58862 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf26-SUFU C10orf26 chr10 104569811 - SUFU chr10 104352339 + Exonic hg19 GBM TCGA-27-2524-01A 2 1 Out-of-frame Intra-chr q24.32 Oncogene Tumor suppressor gene 58863 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf26-SUFU C10orf26 chr10 104536174 - SUFU chr10 104352339 + Exonic hg19 LUAD TCGA-38-4630-01A 122 50 Out-of-frame Intra-chr q24.32 Oncogene Tumor suppressor gene 58864 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf26-SUFU C10orf26 chr10 104503900 - SUFU chr10 104352339 + Exonic hg19 LUAD TCGA-55-7576-01A 3 1 Out-of-frame Intra-chr q24.32 Oncogene Tumor suppressor gene 58865 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf26-SUFU C10orf26 chr10 104503900 - SUFU chr10 104375025 + Exonic hg19 CESC TCGA-FU-A3HZ-01A 16 2 Out-of-frame Intra-chr q24.32 Oncogene Tumor suppressor gene 58866 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf26-SUFU C10orf26 chr10 104503900 - SUFU chr10 104352339 + Exonic hg19 CESC TCGA-ZJ-AAX8-01A 16 9 Out-of-frame Intra-chr q24.32 Oncogene Tumor suppressor gene 58867 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf26-TRIM8 C10orf26 chr10 104503900 - TRIM8 chr10 104414410 + Exonic hg19 LUAD TCGA-67-6217-01A 5 5 Out-of-frame Intra-chr q24.32 58868 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf32-C10orf26 C10orf32 chr10 104622689 - C10orf26 chr10 104569650 + Exonic hg19 LIHC TCGA-ZS-A9CF-01A 8 2 Out-of-frame Intra-chr 58869 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf32-C10orf26 C10orf32 chr10 104622689 - C10orf26 chr10 104569650 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 9 4 Out-of-frame Intra-chr 58870 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf46-EIF3A C10orf46 chr10 120488807 - EIF3A chr10 120818909 - Exonic hg19 BRCA TCGA-D8-A1JK-01A 43 45 In-Frame Intra-chr q26.11 Seq+ 58871 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf46-IL1RN C10orf46 chr10 120513908 - IL1RN chr2 113885266 + Exonic hg19 UCEC TCGA-KP-A3W4-01A 7 3 In-Frame Inter-chr q14.1 58872 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf57-CREB3L3 C10orf57 chr10 81841960 - CREB3L3 chr19 4170137 + Exonic hg19 BRCA TCGA-E2-A106-01A 5 10 In-Frame Inter-chr p13.3 Transcription factor Seq+ 58873 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf76-LDB1 C10orf76 chr10 103815842 - LDB1 chr10 103871293 - Exonic hg19 HNSC TCGA-F7-A61W-01A 5 8 5'UTR-5'UTR Intra-chr q24.32 q24.32 Seq+ 58874 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf76-LDB1 C10orf76 chr10 103699620 - LDB1 chr10 103871293 - Exonic hg19 ESCA TCGA-JY-A6FH-01A 3 7 Out-of-frame Intra-chr q24.32 q24.32 Seq+ 58875 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C10orf88-PPAPDC1A C10orf88 chr10 124708165 - PPAPDC1A chr10 122334643 + Exonic hg19 SKCM TCGA-EB-A4P0-01A 25 14 Out-of-frame Intra-chr q26.13 Seq+ 58876 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf30-BBS9 C11orf30 chr11 76207513 - BBS9 chr7 33195250 + Exonic hg19 BRCA TCGA-A8-A091-01A 5 4 Out-of-frame Inter-chr p14.3 Seq+ 58877 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf30-CDH23 C11orf30 chr11 76158052 - CDH23 chr10 73490226 + Exonic hg19 PRAD TCGA-G9-6361-01A 9 8 Out-of-frame Inter-chr q22.1 Seq+ 58878 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf30-LRP5 C11orf30 chr11 76175124 - LRP5 chr11 68153784 + Exonic hg19 BRCA TCGA-LD-A7W6-01A 17 13 Out-of-frame Intra-chr q13.2 Seq+ 58879 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf30-SHANK2 C11orf30 chr11 76237679 - SHANK2 chr11 70507783 - Exonic hg19 BRCA TCGA-XX-A899-01A 14 12 Out-of-frame Intra-chr q13.4 Seq+ 58880 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf30-UVRAG C11orf30 chr11 76207513 - UVRAG chr11 75715049 + Exonic hg19 BRCA TCGA-A2-A0ES-01A 22 5 In-Frame Intra-chr q13.5 Tumor suppressor gene Seq+ 58881 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf30-UVRAG C11orf30 chr11 76253411 - UVRAG chr11 75851755 + Exonic hg19 STAD TCGA-BR-8590-01A 2 22 Out-of-frame Intra-chr q13.5 Tumor suppressor gene Seq+ 58882 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf41-WARS2 C11orf41 chr11 33596419 - WARS2 chr1 119619230 - Exonic hg19 HNSC TCGA-CV-6937-01A 7 5 Out-of-frame Inter-chr p12 58883 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf48-BSCL2 C11orf48 chr11 62437113 - BSCL2 chr11 62462183 - Exonic hg19 LGG TCGA-S9-A7R8-01A 9 7 Out-of-frame Intra-chr q12.3 Seq+ 58884 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf49-C11orf24 C11orf49 chr11 47008861 - C11orf24 chr11 68035719 - Exonic hg19 PRAD TCGA-KK-A6E6-01A 3 1 CDS-5'UTR Intra-chr p11.2 q13.2 58885 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf49-CD5 C11orf49 chr11 47074069 - CD5 chr11 60882528 + Exonic hg19 PRAD TCGA-G9-6377-01A 2 5 In-Frame Intra-chr p11.2 q12.2 Seq+ 58886 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf49-F2 C11orf49 chr11 47008861 - F2 chr11 46747409 + Exonic hg19 LUAD TCGA-69-7979-01A 6 7 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 58887 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf49-LRP4 C11orf49 chr11 46958402 - LRP4 chr11 46886737 - Exonic hg19 CESC TCGA-VS-A8Q9-01A 2 1 Out-of-frame Intra-chr p11.2 p11.2 58888 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf49-NUP98 C11orf49 chr11 47182741 - NUP98 chr11 3735225 - Exonic hg19 PRAD TCGA-YL-A8HL-01A 2 4 In-Frame Intra-chr p11.2 p15.4 Oncogene Tumor suppressor gene Seq+ 58889 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf49-PACSIN3 C11orf49 chr11 47159280 - PACSIN3 chr11 47204620 - Exonic hg19 UCEC TCGA-A5-A7WK-01A 3 3 CDS-5'UTR Intra-chr p11.2 p11.2 58890 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf49-PPME1 C11orf49 chr11 46958402 - PPME1 chr11 73941290 + Exonic hg19 BRCA TCGA-LL-A6FQ-01A 10 2 Out-of-frame Intra-chr p11.2 q13.4 Seq+ 58891 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf57-DLAT C11orf57 chr11 111946367 - DLAT chr11 111930627 + Exonic hg19 BRCA TCGA-A7-A4SA-01A 13 5 Out-of-frame Intra-chr q23.1 q23.1 58892 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf65-KDELC2 C11orf65 chr11 108332206 - KDELC2 chr11 108345679 - Exonic hg19 LIHC TCGA-ZS-A9CF-01A 2 2 In-Frame Intra-chr q22.3 q22.3 58893 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf67-SCGB1D1 C11orf67 chr11 77553674 - SCGB1D1 chr11 61959528 + Exonic hg19 HNSC TCGA-CV-6951-01A 2 5 Out-of-frame Intra-chr q12.3 58894 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf67-TMEM135 C11orf67 chr11 77532287 - TMEM135 chr11 87006824 + Exonic hg19 ESCA TCGA-L5-A8NS-01A 3 5 5'UTR-5'UTR Intra-chr q14.2 58895 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf75-FAM129B C11orf75 chr11 93211638 - FAM129B chr9 130294057 - Exonic hg19 PRAD TCGA-G9-6371-01A 2 4 3'UTR-CDS Inter-chr q34.11 58896 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf75-FDFT1 C11orf75 chr11 93211638 - FDFT1 chr8 11653082 + Exonic hg19 PRAD TCGA-M7-A723-01A 2 3 Out-of-frame Inter-chr p23.1 58897 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf80-BBS1 C11orf80 chr11 66526567 - BBS1 chr11 66294120 + Exonic hg19 BRCA TCGA-BH-A18T-01A 13 11 In-Frame Intra-chr q13.2 q13.2 Seq+ 58898 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf80-PPP6R3 C11orf80 chr11 66512390 - PPP6R3 chr11 68286969 + Exonic hg19 LUSC TCGA-85-8582-01A 2 1 CDS-5'UTR Intra-chr q13.2 q13.2 Seq+ 58899 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf80-PPP6R3 C11orf80 chr11 66526567 - PPP6R3 chr11 68272613 + Exonic hg19 BRCA TCGA-C8-A8HQ-01A 2 3 CDS-5'UTR Intra-chr q13.2 q13.2 Seq+ 58900 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf80-RBM14 C11orf80 chr11 66595835 - RBM14 chr11 66391685 + Exonic hg19 LUAD TCGA-73-7499-01A 5 3 Out-of-frame Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 58901 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf84-BUB1B C11orf84 chr11 63581285 - BUB1B chr15 40468678 + Exonic hg19 LUSC TCGA-94-7557-01A 2 1 Out-of-frame Inter-chr q13.1 q15.1 Oncogene Seq+ 58902 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf9-C11orf66 C11orf9 chr11 61533184 - C11orf66 chr11 61252810 + Exonic hg19 STAD TCGA-VQ-A8DU-01A 12 98 Out-of-frame Intra-chr 58903 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C11orf9-STX5 C11orf9 chr11 61520262 - STX5 chr11 62575100 - Exonic hg19 SARC TCGA-DX-A8BS-01A 11 10 Out-of-frame Intra-chr q12.3 58904 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf23-RFX4 C12orf23 chr12 107360958 - RFX4 chr12 107033110 + Exonic hg19 BRCA TCGA-EW-A3U0-01A 2 6 In-Frame Intra-chr q23.3 Transcription factor Seq+ 58905 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf26-ATP2B1 C12orf26 chr12 82793173 - ATP2B1 chr12 90005149 - Exonic hg19 SARC TCGA-DX-A48N-01A 346 179 In-Frame Intra-chr q21.33 Seq+ 58906 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf26-CPM C12orf26 chr12 82850599 - CPM chr12 69326620 - Exonic hg19 SARC TCGA-DX-A6BG-01A 11 13 CDS-5'UTR Intra-chr q15 58907 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf26-GALNT9 C12orf26 chr12 82796909 - GALNT9 chr12 132863016 - Exonic hg19 SARC TCGA-DX-A2J0-01A 24 8 In-Frame Intra-chr q24.33 Seq+ 58908 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf26-GTPBP10 C12orf26 chr12 82752603 - GTPBP10 chr7 90001469 + Exonic hg19 SARC TCGA-FX-A2QS-01A 4 6 Out-of-frame Inter-chr q21.13 58909 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf26-PTPRQ C12orf26 chr12 82796909 - PTPRQ chr12 81025971 + Exonic hg19 SARC TCGA-DX-AB35-01A 3 3 In-Frame Intra-chr q21.31 58910 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf26-RP11-362K2.2 C12orf26 chr12 82828503 - RP11-362K2.2 chr12 58937907 + Exonic hg19 SARC TCGA-FX-A3NK-01A 2 9 Out-of-frame Intra-chr 58911 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf28-CTD-2021H9.3 C12orf28 chr12 70304710 - CTD-2021H9.3 chr12 71441459 - Exonic hg19 SARC TCGA-DX-AB2F-01A 10 1 Out-of-frame Intra-chr 58912 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf28-MDM2 C12orf28 chr12 70219343 - MDM2 chr12 69214105 + Exonic hg19 LUAD TCGA-50-5049-01A 2 1 Out-of-frame Intra-chr q15 Oncogene 58913 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf29-IRAK4 C12orf29 chr12 88429515 - IRAK4 chr12 44161906 + Exonic hg19 PRAD TCGA-KK-A8I8-01A 13 7 CDS-5'UTR Intra-chr q21.32 q12 TKL:IRAK Seq+ 58914 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf34-MSI1 C12orf34 chr12 110152702 - MSI1 chr12 120802558 - Exonic hg19 LUSC TCGA-34-5232-01A 2 4 Out-of-frame Intra-chr q24.31 58915 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf35-A2ML1 C12orf35 chr12 32113805 - A2ML1 chr12 9004380 + Exonic hg19 SKCM TCGA-D3-A3CC-06A 36 58 5'UTR-5'UTR Intra-chr p13.31 58916 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf35-ITPR2 C12orf35 chr12 32113805 - ITPR2 chr12 26540527 - Exonic hg19 LUSC TCGA-85-8584-01A 33 13 5'UTR-CDS Intra-chr p11.23 Seq+ 58917 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf35-LOH12CR1 C12orf35 chr12 32113805 - LOH12CR1 chr12 12588562 + Exonic hg19 STAD TCGA-VQ-A8PK-01A 3 108 5'UTR-CDS Intra-chr 58918 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf35-MLIP C12orf35 chr12 32113805 - MLIP chr6 54122106 + Exonic hg19 LGG TCGA-E1-A7YI-01A 81 54 5'UTR-CDS Inter-chr p12.1 Seq+ 58919 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf35-SOX5 C12orf35 chr12 32123290 - SOX5 chr12 23908658 - Exonic hg19 KIRC TCGA-B0-4688-01A 4 6 5'UTR-CDS Intra-chr p12.1 Transcription factor 58920 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf44-CSRNP2 C12orf44 chr12 52464267 - CSRNP2 chr12 51470430 - Exonic hg19 SKCM TCGA-D3-A1Q1-06A 17 15 5'UTR-5'UTR Intra-chr q13.12 Transcription factor Seq+ 58921 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf49-MDM2 C12orf49 chr12 117175595 - MDM2 chr12 69229609 + Exonic hg19 GBM TCGA-06-5856-01A 21 127 In-Frame Intra-chr q24.22 q15 Oncogene Seq+ 58922 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf49-SLC35E3 C12orf49 chr12 117175595 - SLC35E3 chr12 69145812 + Exonic hg19 GBM TCGA-06-5856-01A 3 7 In-Frame Intra-chr q24.22 q15 58923 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf49-SRRM4 C12orf49 chr12 117175595 - SRRM4 chr12 119583186 + Exonic hg19 GBM TCGA-06-5856-01A 11 2 In-Frame Intra-chr q24.22 q24.23 Seq+ 58924 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf5-CRP C12orf5 chr12 4430469 - CRP chr1 159682584 - Exonic hg19 SARC TCGA-DX-A240-01A 11 4 Out-of-frame Inter-chr q23.2 58925 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf5-PRR4 C12orf5 chr12 4440483 - PRR4 chr12 11001006 - Exonic hg19 LUSC TCGA-77-A5GB-01B 50 34 In-Frame Intra-chr Seq+ 58926 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf5-PTPN6 C12orf5 chr12 4430469 - PTPN6 chr12 7060772 + Exonic hg19 SARC TCGA-FX-A3TO-01A 17 5 In-Frame Intra-chr p13.31 Tumor suppressor gene Seq+ 58927 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf5-TSPAN9 C12orf5 chr12 4430469 - TSPAN9 chr12 3310343 + Exonic hg19 GBM TCGA-06-0157-01A 5 93 CDS-5'UTR Intra-chr p13.33 Seq+ 58928 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf5-ZNF827 C12orf5 chr12 4430469 - ZNF827 chr4 146744677 - Exonic hg19 SARC TCGA-3B-A9HL-01A 2 1 In-Frame Inter-chr q31.22 Transcription factor 58929 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf51-AMDHD1 C12orf51 chr12 112819756 - AMDHD1 chr12 96360126 + Exonic hg19 SARC TCGA-DX-A1KW-01A 70 48 5'UTR-CDS Intra-chr q23.1 58930 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf51-BTBD11 C12orf51 chr12 112819756 - BTBD11 chr12 107914264 + Exonic hg19 SARC TCGA-DX-A3U5-01A 6 1 5'UTR-CDS Intra-chr q23.3 58931 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf51-C15orf60 C12orf51 chr12 112614400 - C15orf60 chr15 73832826 + Exonic hg19 PRAD TCGA-EJ-5515-01A 5 1 Out-of-frame Inter-chr 58932 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf51-C18orf45 C12orf51 chr12 112757029 - C18orf45 chr18 21001408 - Exonic hg19 READ TCGA-EF-5831-01A 6 1 Out-of-frame Inter-chr 58933 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf51-CRY1 C12orf51 chr12 112819756 - CRY1 chr12 107415970 - Exonic hg19 LGG TCGA-WY-A859-01A 17 6 5'UTR-CDS Intra-chr q23.3 58934 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf51-LTA4H C12orf51 chr12 112819756 - LTA4H chr12 96400187 - Exonic hg19 SARC TCGA-DX-A3U5-01A 21 13 5'UTR-CDS Intra-chr q23.1 58935 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf51-PEBP1 C12orf51 chr12 112743868 - PEBP1 chr12 118575844 + Exonic hg19 LUSC TCGA-34-5232-01A 7 24 In-Frame Intra-chr q24.23 Tumor suppressor gene Seq+ 58936 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf51-RP11-362K2.2 C12orf51 chr12 112819756 - RP11-362K2.2 chr12 59206196 + Exonic hg19 SARC TCGA-DX-A1KW-01A 147 164 Out-of-frame Intra-chr 58937 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf51-RPH3A C12orf51 chr12 112819756 - RPH3A chr12 113229948 + Exonic hg19 STAD TCGA-FP-7916-01A 3 11 5'UTR-5'UTR Intra-chr q24.13 58938 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf51-RPL6 C12orf51 chr12 112819756 - RPL6 chr12 112849246 - Exonic hg19 ESCA TCGA-JY-A6FH-01A 2 10 5'UTR-5'UTR Intra-chr q24.13 58939 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf51-SBNO1 C12orf51 chr12 112642290 - SBNO1 chr12 123780597 - Exonic hg19 BRCA TCGA-C8-A1HO-01A 6 1 In-Frame Intra-chr q24.31 58940 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf51-SRRM4 C12orf51 chr12 112605121 - SRRM4 chr12 119554742 + Exonic hg19 BRCA TCGA-C8-A12M-01A 5 13 Out-of-frame Intra-chr q24.23 58941 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf51-YAP1 C12orf51 chr12 112819756 - YAP1 chr11 102076624 + Exonic hg19 SARC TCGA-DX-A23Z-01A 2 6 5'UTR-CDS Inter-chr q22.1 Tumor suppressor gene 58942 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf52-GRHL2 C12orf52 chr12 113624853 - GRHL2 chr8 102555469 + Exonic hg19 HNSC TCGA-CV-7253-01A 10 7 In-Frame Inter-chr Tumor suppressor gene q22.3 Transcription factor Seq+ 58943 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf56-APPL2 C12orf56 chr12 64784094 - APPL2 chr12 105593309 - Exonic hg19 SARC TCGA-DX-A3M1-01A 2 3 Out-of-frame Intra-chr q14.2 q23.3 Seq+ 58944 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf63-CCDC60 C12orf63 chr12 96915967 - CCDC60 chr12 119926564 + Exonic hg19 MESO TCGA-SH-A9CT-01A 3 1 Out-of-frame Intra-chr q24.23 58945 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf63-CPM C12orf63 chr12 97114343 - CPM chr12 69265736 - Exonic hg19 SARC TCGA-DX-A3M1-01A 5 2 Out-of-frame Intra-chr q15 58946 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf63-NAV3 C12orf63 chr12 96992545 - NAV3 chr12 78540149 + Exonic hg19 SARC TCGA-DX-AB2F-01A 27 16 Out-of-frame Intra-chr q21.2 58947 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf63-SLC5A8 C12orf63 chr12 97102581 - SLC5A8 chr12 101588940 - Exonic hg19 SARC TCGA-DX-A3M1-01A 18 8 Out-of-frame Intra-chr Tumor suppressor gene 58948 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf65-EIF4EBP1 C12orf65 chr12 123718078 - EIF4EBP1 chr8 37914599 + Exonic hg19 SARC TCGA-DX-A3LS-01A 200 155 5'UTR-CDS Inter-chr q24.31 p11.23 Seq+ 58949 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf65-SLC11A2 C12orf65 chr12 123718078 - SLC11A2 chr12 51404549 - Exonic hg19 LUSC TCGA-NC-A5HJ-01A 2 2 5'UTR-5'UTR Intra-chr q24.31 q13.12 Seq+ 58950 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf66-CPM C12orf66 chr12 64609458 - CPM chr12 69326620 - Exonic hg19 SARC TCGA-FX-A2QS-01A 11 9 CDS-5'UTR Intra-chr q14.2 q15 Seq+ 58951 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf66-NXF3 C12orf66 chr12 64609458 - NXF3 chrX 102339811 - Exonic hg19 SARC TCGA-HB-A3YV-01A 5 6 Out-of-frame Inter-chr q14.2 q22.1 Seq+ 58952 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf66-USP15 C12orf66 chr12 64609458 - USP15 chr12 62810878 + Exonic hg19 SARC TCGA-HB-A3YV-01A 2 1 CDS-3'UTR Intra-chr q14.2 q14.1 58953 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf73-GLT8D2 C12orf73 chr12 104359294 - GLT8D2 chr12 104415269 - Exonic hg19 BLCA TCGA-HQ-A2OE-01A 6 2 5'UTR-5'UTR Intra-chr q23.3 q23.3 Seq+ 58954 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C12orf76-IFT81 C12orf76 chr12 110511227 - IFT81 chr12 110618227 + Exonic hg19 SKCM TCGA-ER-A19W-06A 317 162 5'UTR-CDS Intra-chr q24.11 q24.11 Seq+ 58955 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C14orf101-MLIP C14orf101 chr14 57052630 - MLIP chr6 53986245 + Exonic hg19 LUSC TCGA-22-1017-01A 81 34 Out-of-frame Inter-chr p12.1 Seq+ 58956 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C14orf102-CATSPERB C14orf102 chr14 90798185 - CATSPERB chr14 92091351 - Exonic hg19 BLCA TCGA-G2-AA3B-01A 7 4 Out-of-frame Intra-chr 58957 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C14orf126-CGRRF1 C14orf126 chr14 31922481 - CGRRF1 chr14 54989172 + Exonic hg19 SKCM TCGA-D9-A4Z5-01A 2 3 Out-of-frame Intra-chr q22.2 58958 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C14orf37-KIAA0586 C14orf37 chr14 58764673 - KIAA0586 chr14 58975273 + Exonic hg19 LGG TCGA-DU-7006-01A 205 105 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 58959 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C14orf37-RSPO2 C14orf37 chr14 58764673 - RSPO2 chr8 109095035 - Exonic hg19 COAD TCGA-AY-6196-01A 3 2 5'UTR-5'UTR Inter-chr q23.1 q23.1 58960 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C14orf43-ACOT1 C14orf43 chr14 74226466 - ACOT1 chr14 74008197 + Exonic hg19 BRCA TCGA-BH-A0B6-01A 3 8 5'UTR-CDS Intra-chr q24.3 58961 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C14orf43-VSX2 C14orf43 chr14 74253805 - VSX2 chr14 74707885 + Exonic hg19 OV TCGA-29-A5NZ-01A 3 19 5'UTR-CDS Intra-chr q24.3 Transcription factor Seq+ 58962 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C14orf45-DNAL1 C14orf45 chr14 74500874 - DNAL1 chr14 74138245 + Exonic hg19 UCEC TCGA-PG-A914-01A 3 1 Out-of-frame Intra-chr q24.3 58963 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C14orf45-RGS6 C14orf45 chr14 74486237 - RGS6 chr14 72921236 + Exonic hg19 BRCA TCGA-A2-A0EW-01A 7 6 Out-of-frame Intra-chr q24.2 58964 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C14orf45-RP5-1021I20.4 C14orf45 chr14 74523961 - RP5-1021I20.4 chr14 74345799 + Exonic hg19 BRCA TCGA-A8-A07C-01A 11 1 Out-of-frame Intra-chr 58965 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C14orf93-TIMM9 C14orf93 chr14 23479310 - TIMM9 chr14 58878689 - Exonic hg19 BLCA TCGA-XF-AAMW-01A 2 11 5'UTR-5'UTR Intra-chr q11.2 q23.1 Seq+ 58966 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C15orf24-CD27 C15orf24 chr15 34388096 - CD27 chr12 6554590 + Exonic hg19 SARC TCGA-X6-A8C6-01A 13 13 CDS-3'UTR Inter-chr p13.31 Seq+ 58967 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C15orf41-FAM189A1 C15orf41 chr15 36950106 - FAM189A1 chr15 29429397 - Exonic hg19 LUSC TCGA-58-A46J-01A 2 1 Out-of-frame Intra-chr q14 58968 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C15orf41-FAM98B C15orf41 chr15 36872162 - FAM98B chr15 38756233 + Exonic hg19 BRCA TCGA-BH-A0E6-01A 2 4 In-Frame Intra-chr q14 q14 58969 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C15orf41-FBXL2 C15orf41 chr15 36950106 - FBXL2 chr3 33425481 + Exonic hg19 HNSC TCGA-F7-A623-01A 2 2 Out-of-frame Inter-chr q14 p22.3 58970 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C15orf41-LYSMD4 C15orf41 chr15 37002162 - LYSMD4 chr15 100269936 - Exonic hg19 BRCA TCGA-C8-A27A-01A 5 4 Out-of-frame Intra-chr q14 q26.3 Seq+ 58971 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C15orf41-MEIS2 C15orf41 chr15 36872162 - MEIS2 chr15 37242601 - Exonic hg19 GBM TCGA-06-0174-01A 3 4 Out-of-frame Intra-chr q14 q14 Transcription factor Seq+ 58972 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C15orf41-RAC2 C15orf41 chr15 37002162 - RAC2 chr22 37628958 - Exonic hg19 SKCM TCGA-ER-A19C-06A 82 45 In-Frame Inter-chr q14 q13.1 Seq+ 58973 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C15orf41-RYR3 C15orf41 chr15 36872162 - RYR3 chr15 34014916 + Exonic hg19 HNSC TCGA-HD-8224-01A 3 1 Out-of-frame Intra-chr q14 q13.3 Seq+ 58974 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C15orf41-SLCO3A1 C15orf41 chr15 36872162 - SLCO3A1 chr15 92663695 + Exonic hg19 COAD TCGA-CM-5348-01A 11 6 Out-of-frame Intra-chr q14 q26.1 Seq+ 58975 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C15orf42-ATXN7L1 C15orf42 chr15 90119471 - ATXN7L1 chr7 105264714 - Exonic hg19 BRCA TCGA-B6-A0IO-01A 2 1 Out-of-frame Inter-chr q22.3 58976 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C15orf44-SLC24A1 C15orf44 chr15 65903134 - SLC24A1 chr15 65911218 + Exonic hg19 BLCA TCGA-DK-AA6W-01A 8 1 3'UTR-5'UTR Intra-chr q22.31 58977 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C16orf45-POMT2 C16orf45 chr16 15528616 - POMT2 chr14 77772784 - Exonic hg19 BRCA TCGA-A8-A0AD-01A 10 9 Out-of-frame Inter-chr q24.3 Seq+ 58978 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C16orf45-RHBDL2 C16orf45 chr16 15528616 - RHBDL2 chr1 39385009 - Exonic hg19 BRCA TCGA-AO-A126-01A 3 5 5'UTR-5'UTR Inter-chr p34.3 Seq+ 58979 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C16orf45-SMPDL3B C16orf45 chr16 15528616 - SMPDL3B chr1 28284987 + Exonic hg19 LIHC TCGA-FV-A495-01A 8 4 Out-of-frame Inter-chr p35.3 Seq+ 58980 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C16orf53-KIF22 C16orf53 chr16 29828613 - KIF22 chr16 29814090 + Exonic hg19 HNSC TCGA-CN-A63U-01A 75 35 Out-of-frame Intra-chr p11.2 58981 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C16orf55-DPEP1 C16orf55 chr16 89724829 - DPEP1 chr16 89696713 + Exonic hg19 BRCA TCGA-B6-A0RS-01A 4 4 CDS-5'UTR Intra-chr q24.3 Seq+ 58982 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C16orf57-CCDC135 C16orf57 chr16 58036549 - CCDC135 chr16 57761211 + Exonic hg19 LUAD TCGA-L4-A4E5-01A 74 38 Out-of-frame Intra-chr Seq+ 58983 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C16orf57-CX3CL1 C16orf57 chr16 58048230 - CX3CL1 chr16 57413546 + Exonic hg19 PCPG TCGA-QR-A6GW-01A 6 8 Out-of-frame Intra-chr q21 58984 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C16orf61-PZP C16orf61 chr16 81040339 - PZP chr12 9312621 - Exonic hg19 LUAD TCGA-53-A4EZ-01A 10 4 Out-of-frame Inter-chr p13.31 58985 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C16orf62-ABCC6P1 C16orf62 chr16 19644494 - ABCC6P1 chr16 18593728 + Exonic hg19 BRCA TCGA-AR-A0TX-01A 2 7 CDS-5'UTR Intra-chr p12.3 p12.3 Seq+ 58986 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C16orf62-CDR2 C16orf62 chr16 19621737 - CDR2 chr16 22361170 - Exonic hg19 PRAD TCGA-V1-A9ZR-01A 4 5 In-Frame Intra-chr p12.3 p12.2 Seq+ 58987 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C16orf62-TMC5 C16orf62 chr16 19603196 - TMC5 chr16 19505584 + Exonic hg19 BRCA TCGA-AR-A256-01A 2 2 Out-of-frame Intra-chr p12.3 p12.3 Seq+ 58988 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C16orf7-ZNF827 C16orf7 chr16 89787171 - ZNF827 chr4 146700663 - Exonic hg19 LGG TCGA-HT-7857-01A 10 12 Out-of-frame Inter-chr q31.22 Transcription factor Seq+ 58989 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C16orf70-CRTC3 C16orf70 chr16 67166814 - CRTC3 chr15 91136868 + Exonic hg19 STAD TCGA-IN-AB1X-01A 3 16 In-Frame Inter-chr q22.1 q26.1 Seq+ 58990 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C16orf70-GNAO1 C16orf70 chr16 67159945 - GNAO1 chr16 56362543 + Exonic hg19 LIHC TCGA-PD-A5DF-01A 14 4 In-Frame Intra-chr q22.1 q13 Seq+ 58991 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C16orf72-ABAT C16orf72 chr16 9197116 - ABAT chr16 8851614 + Exonic hg19 STAD TCGA-VQ-A922-01A 2 15 In-Frame Intra-chr p13.2 p13.2 Seq+ 58992 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C16orf74-ATAD1 C16orf74 chr16 85768796 - ATAD1 chr10 89552512 - Exonic hg19 PRAD TCGA-4L-AA1F-01A 2 1 Out-of-frame Inter-chr q24.1 Seq+ 58993 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C16orf74-COX4NB C16orf74 chr16 85784532 - COX4NB chr16 85814079 - Exonic hg19 HNSC TCGA-CQ-A4C7-01A 11 11 5'UTR-CDS Intra-chr q24.1 58994 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C16orf74-COX4NB C16orf74 chr16 85784532 - COX4NB chr16 85814886 - Exonic hg19 CESC TCGA-DS-A1O9-01A 28 6 5'UTR-CDS Intra-chr q24.1 58995 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C16orf87-ATXN2 C16orf87 chr16 46864996 - ATXN2 chr12 111891649 - Exonic hg19 BRCA TCGA-A7-A425-01A 8 1 In-Frame Inter-chr q11.2 q24.12 Seq+ 58996 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C16orf87-CNOT1 C16orf87 chr16 46864996 - CNOT1 chr16 58581200 - Exonic hg19 KIRC TCGA-CJ-4923-01A 2 1 In-Frame Intra-chr q11.2 q21 58997 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf101-AC091172.1 C17orf101 chr17 80373274 - AC091172.1 chr17 40113400 + Exonic hg19 SARC TCGA-DX-A8BG-01A 13 5 Out-of-frame Intra-chr 58998 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf101-WDR45L C17orf101 chr17 80369331 - WDR45L chr17 80585167 - Exonic hg19 LGG TCGA-HW-8321-01A 4 8 Out-of-frame Intra-chr 58999 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf108-HAP1 C17orf108 chr17 26207300 - HAP1 chr17 39884583 - Exonic hg19 STAD TCGA-RD-A7BT-01A 3 14 Out-of-frame Intra-chr q21.2 Seq+ 59000 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf28-DNAH17 C17orf28 chr17 72968686 - DNAH17 chr17 76506588 - Exonic hg19 LIHC TCGA-ED-A97K-01A 4 1 In-Frame Intra-chr q25.3 59001 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf28-SRP68 C17orf28 chr17 72968686 - SRP68 chr17 74057655 - Exonic hg19 CESC TCGA-JW-A5VI-01A 22 11 In-Frame Intra-chr q25.1 Seq+ 59002 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf37-TEX2 C17orf37 chr17 37886447 - TEX2 chr17 62238293 - Exonic hg19 READ TCGA-AG-3902-01A 15 13 Out-of-frame Intra-chr q23.3 59003 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf39-FDXR C17orf39 chr17 17943216 - FDXR chr17 72862998 - Exonic hg19 BRCA TCGA-LD-A7W5-01A 30 38 In-Frame Intra-chr q25.1 59004 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf42-CADM2 C17orf42 chr17 29227431 - CADM2 chr3 85932441 + Exonic hg19 BLCA TCGA-G2-A2EF-01A 3 2 Out-of-frame Inter-chr p12.1 Tumor suppressor gene 59005 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf56-SLC38A10 C17orf56 chr17 79207232 - SLC38A10 chr17 79246427 - Exonic hg19 LIHC TCGA-CC-5263-01A 9 4 Out-of-frame Intra-chr q25.3 59006 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf57-MYL4 C17orf57 chr17 45492285 - MYL4 chr17 45286755 + Exonic hg19 BRCA TCGA-B6-A0I1-01A 4 2 CDS-5'UTR Intra-chr q21.32 59007 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf62-HEXDC C17orf62 chr17 80403740 - HEXDC chr17 80391534 + Exonic hg19 CESC TCGA-DG-A2KM-01A 37 12 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 59008 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf63-CHD7 C17orf63 chr17 27139227 - CHD7 chr8 61653818 + Exonic hg19 LUAD TCGA-55-1595-01A 12 4 Out-of-frame Inter-chr q12.2 59009 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf63-CRLF3 C17orf63 chr17 27139227 - CRLF3 chr17 29131126 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 32 11 Out-of-frame Intra-chr q11.2 59010 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf63-DHRS13 C17orf63 chr17 27093604 - DHRS13 chr17 27225910 - Exonic hg19 LUSC TCGA-94-7943-01A 2 1 Out-of-frame Intra-chr q11.2 59011 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf63-DOPEY2 C17orf63 chr17 27139227 - DOPEY2 chr21 37537006 + Exonic hg19 BRCA TCGA-OL-A5RZ-01A 2 2 Out-of-frame Inter-chr q22.12 59012 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf63-GIP C17orf63 chr17 27093604 - GIP chr17 47044615 - Exonic hg19 BRCA TCGA-C8-A275-01A 2 2 Out-of-frame Intra-chr q21.32 59013 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf63-GYS2 C17orf63 chr17 27139227 - GYS2 chr12 21721943 - Exonic hg19 LUAD TCGA-95-8494-01A 6 1 Out-of-frame Inter-chr p12.1 59014 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf63-HAO2 C17orf63 chr17 27139227 - HAO2 chr1 119934733 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 20 6 Out-of-frame Inter-chr p12 59015 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf63-MYO18A C17orf63 chr17 27139227 - MYO18A chr17 27494039 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 14 7 Out-of-frame Intra-chr q11.2 Oncogene 59016 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf63-NEK8 C17orf63 chr17 27093604 - NEK8 chr17 27061001 + Exonic hg19 OV TCGA-24-1431-01A 152 50 Out-of-frame Intra-chr q11.2 Other:NEK 59017 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf63-PHF12 C17orf63 chr17 27139227 - PHF12 chr17 27254081 - Exonic hg19 BRCA TCGA-GI-A2C9-01A 33 6 Out-of-frame Intra-chr q11.2 59018 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf63-PRPSAP1 C17orf63 chr17 27139227 - PRPSAP1 chr17 74309972 - Exonic hg19 SARC TCGA-X6-A7W8-01A 17 8 Out-of-frame Intra-chr q25.1 59019 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf63-RAB5C C17orf63 chr17 27139227 - RAB5C chr17 40282608 - Exonic hg19 UCEC TCGA-AJ-A3EM-01A 141 24 Out-of-frame Intra-chr q21.2 59020 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf63-SEZ6 C17orf63 chr17 27093604 - SEZ6 chr17 27309057 - Exonic hg19 OV TCGA-23-1030-01A 3 9 Out-of-frame Intra-chr q11.2 59021 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf63-STXBP4 C17orf63 chr17 27139227 - STXBP4 chr17 53076706 + Exonic hg19 READ TCGA-AG-3731-01A 11 22 Out-of-frame Intra-chr q22 59022 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf63-TRIM37 C17orf63 chr17 27139227 - TRIM37 chr17 57181755 - Exonic hg19 COAD TCGA-AA-A01Z-01A 14 3 Out-of-frame Intra-chr q22 59023 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf63-UNC5D C17orf63 chr17 27139227 - UNC5D chr8 35608100 + Exonic hg19 LUAD TCGA-50-6673-01A 44 20 Out-of-frame Inter-chr p12 Tumor suppressor gene 59024 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf65-DCAF5 C17orf65 chr17 42263933 - DCAF5 chr14 69558604 - Exonic hg19 PRAD TCGA-G9-6494-01A 11 4 5'UTR-CDS Inter-chr q24.1 59025 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf67-CUEDC1 C17orf67 chr17 54892230 - CUEDC1 chr17 55963240 - Exonic hg19 CESC TCGA-VS-A8EJ-01A 4 1 CDS-5'UTR Intra-chr q22 q22 Seq+ 59026 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf70-NPLOC4 C17orf70 chr17 79511030 - NPLOC4 chr17 79532633 - Exonic hg19 LUSC TCGA-56-5897-01A 31 21 In-Frame Intra-chr q25.3 Seq+ 59027 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf70-NPLOC4 C17orf70 chr17 79511030 - NPLOC4 chr17 79526442 - Exonic hg19 SKCM TCGA-W3-A828-06A 50 23 Out-of-frame Intra-chr q25.3 Seq+ 59028 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf75-TOP2A C17orf75 chr17 30662342 - TOP2A chr17 38569877 - Exonic hg19 BRCA TCGA-A8-A09I-01A 32 19 Out-of-frame Intra-chr q11.2 q21.2 Seq+ 59029 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf75-ZNF207 C17orf75 chr17 30660436 - ZNF207 chr17 30685522 + Exonic hg19 CESC TCGA-C5-A8XH-01A 2 3 In-Frame Intra-chr q11.2 q11.2 Transcription factor Seq+ 59030 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf76-PEMT C17orf76 chr17 16395059 - PEMT chr17 17480341 - Exonic hg19 BRCA TCGA-AR-A2LJ-01A 73 105 Out-of-frame Intra-chr p11.2 59031 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf81-ZNF614 C17orf81 chr17 7160357 - ZNF614 chr19 52516505 - Exonic hg19 PRAD TCGA-V1-A8WS-01A 22 7 Out-of-frame Inter-chr q13.41 Transcription factor 59032 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf85-ATP2A3 C17orf85 chr17 3717616 - ATP2A3 chr17 3857004 - Exonic hg19 SKCM TCGA-D9-A6E9-06A 5 5 In-Frame Intra-chr p13.2 Seq+ 59033 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C17orf85-CAMKK1 C17orf85 chr17 3746380 - CAMKK1 chr17 3783728 - Exonic hg19 BRCA TCGA-LL-A5YP-01A 20 5 Out-of-frame Intra-chr p13.2 Seq+ 59034 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C18orf1-C18orf19 C18orf1 chr18 13438383 - C18orf19 chr18 13682104 - Exonic hg19 BRCA TCGA-UL-AAZ6-01A 2 2 Out-of-frame Intra-chr 59035 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C18orf1-CD226 C18orf1 chr18 13438383 - CD226 chr18 67540482 - Exonic hg19 PRAD TCGA-ZG-A9M4-01A 7 4 In-Frame Intra-chr q22.2 59036 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C18orf1-IMPA2 C18orf1 chr18 13278187 - IMPA2 chr18 11999053 + Exonic hg19 OV TCGA-09-1673-01A 2 6 5'UTR-CDS Intra-chr p11.21 Seq+ 59037 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C18orf1-INTS8 C18orf1 chr18 13278187 - INTS8 chr8 95848752 + Exonic hg19 PRAD TCGA-EJ-5507-01A 7 2 5'UTR-CDS Inter-chr q22.1 59038 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C18orf1-NOVA1 C18orf1 chr18 13278187 - NOVA1 chr14 26949349 - Exonic hg19 PRAD TCGA-YL-A8HM-01A 3 4 5'UTR-CDS Inter-chr q12 59039 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C18orf10-DSG1 C18orf10 chr18 34398857 - DSG1 chr18 28906544 + Exonic hg19 COAD TCGA-D5-6929-01A 16 5 Out-of-frame Intra-chr q12.1 59040 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C18orf19-PSMG2 C18orf19 chr18 13726328 - PSMG2 chr18 12712701 + Exonic hg19 PRAD TCGA-ZG-A9L2-01A 14 9 Out-of-frame Intra-chr p11.21 59041 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C18orf25-GABRR2 C18orf25 chr18 43754296 - GABRR2 chr6 90009584 - Exonic hg19 SARC TCGA-DX-AB2T-01A 2 1 5'UTR-CDS Inter-chr q21.1 q15 59042 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C18orf45-NPC1 C18orf45 chr18 20889644 - NPC1 chr18 21131691 - Exonic hg19 LUSC TCGA-77-8138-01A 4 1 Out-of-frame Intra-chr q11.2 59043 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C18orf45-OSBPL1A C18orf45 chr18 21010595 - OSBPL1A chr18 21761243 - Exonic hg19 PAAD TCGA-IB-A7M4-01A 11 1 Out-of-frame Intra-chr q11.2 59044 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C18orf45-PACS1 C18orf45 chr18 20889644 - PACS1 chr11 65960957 + Exonic hg19 HNSC TCGA-UF-A71B-01A 2 2 Out-of-frame Inter-chr q13.1 59045 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C18orf45-SNX29 C18orf45 chr18 20979530 - SNX29 chr16 12492303 + Exonic hg19 LUAD TCGA-MP-A5C7-01A 2 3 Out-of-frame Inter-chr p13.13 59046 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C18orf45-TAF4B C18orf45 chr18 20957610 - TAF4B chr18 23845134 + Exonic hg19 STAD TCGA-BR-8286-01A 2 8 Out-of-frame Intra-chr q11.2 59047 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C18orf8-PSPC1 C18orf8 chr18 21089243 - PSPC1 chr13 20346683 - Exonic hg19 HNSC TCGA-BA-A6DE-01A 94 30 In-Frame Inter-chr q11.2 q12.11 Seq+ 59048 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C18orf8-RIOK3 C18orf8 chr18 21089243 - RIOK3 chr18 21061136 + Exonic hg19 CESC TCGA-VS-A9UB-01A 2 3 In-Frame Intra-chr q11.2 q11.2 Atypical:RIO 59049 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf10-FAM187B C19orf10 chr19 4659943 - FAM187B chr19 35716115 - Exonic hg19 LGG TCGA-TM-A7CF-01A 5 3 Out-of-frame Intra-chr q13.12 Seq+ 59050 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf2-C19orf12 C19orf2 chr19 30433571 - C19orf12 chr19 30193884 - Exonic hg19 STAD TCGA-BR-8289-01A 2 16 Out-of-frame Intra-chr q12 59051 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf2-CHD4 C19orf2 chr19 30477324 - CHD4 chr12 6682435 - Exonic hg19 SARC TCGA-DX-A8BK-01A 4 5 Out-of-frame Inter-chr p13.31 59052 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf2-FOXA3 C19orf2 chr19 30477324 - FOXA3 chr19 46375333 + Exonic hg19 UCEC TCGA-PG-A915-01A 375 268 Out-of-frame Intra-chr q13.32 Transcription factor 59053 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf2-IL29 C19orf2 chr19 30462134 - IL29 chr19 39787445 + Exonic hg19 BRCA TCGA-A2-A3XX-01A 20 11 Out-of-frame Intra-chr 59054 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf2-KCNIP4 C19orf2 chr19 30477324 - KCNIP4 chr4 20852290 - Exonic hg19 TGCT TCGA-YU-A90P-01A 4 10 Out-of-frame Inter-chr p15.2 59055 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf2-PEPD C19orf2 chr19 30462134 - PEPD chr19 33904549 - Exonic hg19 PRAD TCGA-ZG-A9LZ-01A 17 10 Out-of-frame Intra-chr q13.11 59056 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf2-PLEKHF1 C19orf2 chr19 30477324 - PLEKHF1 chr19 30164731 + Exonic hg19 STAD TCGA-BR-8678-01A 24 67 Out-of-frame Intra-chr q12 59057 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf2-PLEKHF1 C19orf2 chr19 30477324 - PLEKHF1 chr19 30164731 + Exonic hg19 STAD TCGA-VQ-A8E2-01A 9 53 Out-of-frame Intra-chr q12 59058 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf2-RHPN2 C19orf2 chr19 30433571 - RHPN2 chr19 33484959 - Exonic hg19 SARC TCGA-DX-A6YV-01A 8 8 Out-of-frame Intra-chr q13.11 59059 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf2-RYR1 C19orf2 chr19 30433571 - RYR1 chr19 39038873 + Exonic hg19 LIHC TCGA-CC-5260-01A 55 31 Out-of-frame Intra-chr q13.2 59060 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf2-SLC35F1 C19orf2 chr19 30477324 - SLC35F1 chr6 118596622 + Exonic hg19 BLCA TCGA-DK-AA6U-01A 7 14 Out-of-frame Inter-chr q22.2 59061 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf2-VSTM2B C19orf2 chr19 30477324 - VSTM2B chr19 30054753 + Exonic hg19 OV TCGA-04-1348-01A 6 10 Out-of-frame Intra-chr q12 59062 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf2-XRCC1 C19orf2 chr19 30433571 - XRCC1 chr19 44065172 - Exonic hg19 OV TCGA-24-1558-01A 14 11 Out-of-frame Intra-chr q13.31 59063 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf2-ZNF383 C19orf2 chr19 30462134 - ZNF383 chr19 37721311 + Exonic hg19 SKCM TCGA-EB-A4IQ-01A 3 1 Out-of-frame Intra-chr q13.12 Transcription factor 59064 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf20-PRKACA C19orf20 chr19 507844 - PRKACA chr19 14204049 - Exonic hg19 BRCA TCGA-AN-A0XT-01A 5 7 Out-of-frame Intra-chr p13.12 59065 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf22-JAK3 C19orf22 chr19 913087 - JAK3 chr19 17953981 - Exonic hg19 ESCA TCGA-L5-A891-01A 7 13 Out-of-frame Intra-chr p13.11 TK:JakA Oncogene 59066 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf22-NLRP1 C19orf22 chr19 900829 - NLRP1 chr17 5405192 - Exonic hg19 SKCM TCGA-D3-A2JG-06A 11 5 Out-of-frame Inter-chr p13.2 Oncogene 59067 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf22-PLEKHA4 C19orf22 chr19 913087 - PLEKHA4 chr19 49344567 - Exonic hg19 OV TCGA-29-1783-01A 23 17 Out-of-frame Intra-chr q13.33 59068 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf22-S100A9 C19orf22 chr19 896503 - S100A9 chr1 153330330 + Exonic hg19 HNSC TCGA-BA-5555-01A 2 9 Out-of-frame Inter-chr q21.3 59069 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf24-PALM C19orf24 chr19 1275829 - PALM chr19 726138 + Exonic hg19 LGG TCGA-DB-A64U-01A 16 4 In-Frame Intra-chr p13.3 p13.3 Seq+ 59070 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf25-CACNA1C C19orf25 chr19 1478773 - CACNA1C chr12 2705040 + Exonic hg19 UCEC TCGA-AJ-A3IA-01A 2 2 Out-of-frame Inter-chr p13.3 p13.33 59071 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf25-MED1 C19orf25 chr19 1478773 - MED1 chr17 37604157 - Exonic hg19 BRCA TCGA-A2-A0EY-01A 26 40 In-Frame Inter-chr p13.3 q12 Tumor suppressor gene Seq+ 59072 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf25-PEPD C19orf25 chr19 1478773 - PEPD chr19 33882385 - Exonic hg19 MESO TCGA-MQ-A4LP-01A 15 15 In-Frame Intra-chr p13.3 q13.11 Seq+ 59073 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf25-REEP6 C19orf25 chr19 1478773 - REEP6 chr19 1497173 + Exonic hg19 TGCT TCGA-XE-AANI-01A 2 2 In-Frame Intra-chr p13.3 p13.3 59074 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf28-CLASP2 C19orf28 chr19 3544198 - CLASP2 chr3 33602368 - Exonic hg19 SKCM TCGA-D3-A1Q3-06A 2 2 Out-of-frame Inter-chr p22.3 59075 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf42-CACNA1A C19orf42 chr19 16770206 - CACNA1A chr19 13366073 - Exonic hg19 BLCA TCGA-ZF-AA5H-01A 22 24 Out-of-frame Intra-chr p13.13 Seq+ 59076 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf48-ACPT C19orf48 chr19 51302551 - ACPT chr19 51297145 + Exonic hg19 LUSC TCGA-21-1081-01A 56 8 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 59077 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf48-CHI3L2 C19orf48 chr19 51300962 - CHI3L2 chr1 111772314 + Exonic hg19 PRAD TCGA-HC-7818-01A 2 13 Out-of-frame Inter-chr q13.33 p13.2 59078 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf55-IGFLR1 C19orf55 chr19 36250892 - IGFLR1 chr19 36230527 - Exonic hg19 BRCA TCGA-E9-A1RF-01A 13 2 Out-of-frame Intra-chr q13.12 Seq+ 59079 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf6-CCDC25 C19orf6 chr19 1020771 - CCDC25 chr8 27610104 - Exonic hg19 BRCA TCGA-OL-A66I-01A 11 4 In-Frame Inter-chr p21.1 59080 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf6-CNN2 C19orf6 chr19 1014191 - CNN2 chr19 1031070 + Exonic hg19 PRAD TCGA-KC-A4BL-01A 10 6 In-Frame Intra-chr p13.3 59081 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf6-SBNO2 C19orf6 chr19 1020771 - SBNO2 chr19 1127764 - Exonic hg19 LUSC TCGA-77-8140-01A 12 6 In-Frame Intra-chr p13.3 59082 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C19orf63-MBOAT7 C19orf63 chr19 50984234 - MBOAT7 chr19 54692365 - Exonic hg19 BRCA TCGA-A8-A08I-01A 12 18 CDS-5'UTR Intra-chr Seq+ 59083 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf116-LIN9 C1orf116 chr1 207205924 - LIN9 chr1 226438620 - Exonic hg19 BLCA TCGA-FD-A3SJ-01A 12 1 5'UTR-CDS Intra-chr q32.1 q42.12 Tumor suppressor gene Seq+ 59084 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf123-ALG6 C1orf123 chr1 53685933 - ALG6 chr1 63862184 + Exonic hg19 BRCA TCGA-B6-A409-01A 5 3 Out-of-frame Intra-chr p32.3 p31.3 Seq+ 59085 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf132-CHRM3 C1orf132 chr1 208041271 - CHRM3 chr1 239990552 + Exonic hg19 PRAD TCGA-EJ-5519-01A 27 12 Out-of-frame Intra-chr q32.2 q43 Seq+ 59086 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf132-GRIK3 C1orf132 chr1 208041271 - GRIK3 chr1 37356697 - Exonic hg19 BRCA TCGA-AR-A1AT-01A 15 11 Out-of-frame Intra-chr q32.2 p34.3 Seq+ 59087 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf132-PROX1 C1orf132 chr1 208041271 - PROX1 chr1 214169812 + Exonic hg19 BRCA TCGA-AN-A0FT-01A 2 2 Out-of-frame Intra-chr q32.2 q32.3 Tumor suppressor gene Transcription factor 59088 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf132-RPS6KB1 C1orf132 chr1 208041271 - RPS6KB1 chr17 57987923 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 2 5 Out-of-frame Inter-chr q32.2 q23.1 Oncogene 59089 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf135-PADI1 C1orf135 chr1 26185771 - PADI1 chr1 17548785 + Exonic hg19 BRCA TCGA-A2-A25F-01A 3 1 Out-of-frame Intra-chr 59090 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf151-KIAA0182 C1orf151 chr1 19923603 - KIAA0182 chr16 85699582 + Exonic hg19 ACC TCGA-OR-A5LO-01A 19 16 Out-of-frame Inter-chr 59091 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf159-SDF4 C1orf159 chr1 1025733 - SDF4 chr1 1164326 - Exonic hg19 LUAD TCGA-91-6836-01A 13 9 CDS-5'UTR Intra-chr p36.33 p36.33 Seq+ 59092 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf159-SDF4 C1orf159 chr1 1051440 - SDF4 chr1 1159348 - Exonic hg19 UCEC TCGA-AX-A3FW-01A 5 3 5'UTR-CDS Intra-chr p36.33 p36.33 Seq+ 59093 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf174-SNAP47 C1orf174 chr1 3816736 - SNAP47 chr1 227946696 + Exonic hg19 PRAD TCGA-EJ-7321-01A 2 1 Out-of-frame Intra-chr p36.32 q42.13 Seq+ 59094 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf177-TTC4 C1orf177 chr1 55273684 - TTC4 chr1 55203255 + Exonic hg19 CESC TCGA-C5-A1MK-01A 22 7 In-Frame Intra-chr p32.3 Tumor suppressor gene Seq+ 59095 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf183-DHRS3 C1orf183 chr1 112281808 - DHRS3 chr1 12640694 - Exonic hg19 SARC TCGA-HB-A2OT-01A 56 43 Out-of-frame Intra-chr p36.21 59096 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf196-FGF12 C1orf196 chr1 14507087 - FGF12 chr3 191888445 - Exonic hg19 LUSC TCGA-66-2790-01A 25 8 Out-of-frame Inter-chr q29 59097 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf196-PHGDH C1orf196 chr1 14507087 - PHGDH chr1 120263793 + Exonic hg19 SARC TCGA-DX-AB2P-01A 11 9 Out-of-frame Intra-chr p12 59098 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf198-GXYLT2 C1orf198 chr1 231004558 - GXYLT2 chr3 72957518 + Exonic hg19 BRCA TCGA-BH-A0BW-01A 3 2 5'UTR-CDS Inter-chr q42.2 p13 Seq+ 59099 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf21-ANGPTL1 C1orf21 chr1 184446737 - ANGPTL1 chr1 178838358 - Exonic hg19 SARC TCGA-SI-AA8B-01A 6 9 CDS-5'UTR Intra-chr q25.3 q25.2 Seq+ 59100 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf21-INTS7 C1orf21 chr1 184567595 - INTS7 chr1 212126043 - Exonic hg19 SARC TCGA-DX-A1L0-01A 32 20 Out-of-frame Intra-chr q25.3 q32.3 Seq+ 59101 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf21-LAMC1 C1orf21 chr1 184446737 - LAMC1 chr1 183085712 + Exonic hg19 HNSC TCGA-CV-7263-01A 2 3 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 59102 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf213-PTCH2 C1orf213 chr1 23696006 - PTCH2 chr1 45292440 - Exonic hg19 SKCM TCGA-EB-A82C-01A 4 1 5'UTR-CDS Intra-chr p34.1 Tumor suppressor gene Seq+ 59103 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf55-C1orf110 C1orf55 chr1 226186894 - C1orf110 chr1 162829448 - Exonic hg19 LGG TCGA-DU-6542-01A 17 7 CDS-5'UTR Intra-chr 59104 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf55-SLC22A15 C1orf55 chr1 226182967 - SLC22A15 chr1 116562203 + Exonic hg19 PRAD TCGA-EJ-7784-01A 7 6 Out-of-frame Intra-chr p13.1 59105 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf85-C1orf61 C1orf85 chr1 156263809 - C1orf61 chr1 156374393 - Exonic hg19 ESCA TCGA-LN-A7HV-01A 22 80 In-Frame Intra-chr q22 59106 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf86-ZC3H11A C1orf86 chr1 2120987 - ZC3H11A chr1 203797427 + Exonic hg19 PRAD TCGA-G9-6353-01A 2 1 3'UTR-CDS Intra-chr q32.1 59107 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf87-FGGY C1orf87 chr1 60463281 - FGGY chr1 60223603 + Exonic hg19 SKCM TCGA-ER-A3ET-06A 4 1 Out-of-frame Intra-chr p32.1 p32.1 Seq+ 59108 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf9-C12orf28 C1orf9 chr1 172502637 - C12orf28 chr12 70249060 + Exonic hg19 SARC TCGA-DX-A1L3-01A 22 17 Out-of-frame Inter-chr 59109 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf9-C12orf42 C1orf9 chr1 172502637 - C12orf42 chr12 103696337 - Exonic hg19 SARC TCGA-DX-A2J0-01A 12 2 Out-of-frame Inter-chr q23.2 59110 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf9-C1orf105 C1orf9 chr1 172502637 - C1orf105 chr1 172425555 + Exonic hg19 BRCA TCGA-A2-A0T2-01A 14 4 Out-of-frame Intra-chr q24.3 59111 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf9-CDH18 C1orf9 chr1 172502637 - CDH18 chr5 19981287 - Exonic hg19 SARC TCGA-DX-A1L3-01A 56 19 CDS-5'UTR Inter-chr p14.3 Seq+ 59112 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf9-CXorf21 C1orf9 chr1 172526934 - CXorf21 chrX 30594983 - Exonic hg19 SARC TCGA-DX-A1KY-01A 249 83 CDS-5'UTR Inter-chr p21.2 Seq+ 59113 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf9-DARS2 C1orf9 chr1 172539870 - DARS2 chr1 173814367 + Exonic hg19 BRCA TCGA-C8-A278-01A 4 2 Out-of-frame Intra-chr q25.1 59114 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf9-DENND1B C1orf9 chr1 172547529 - DENND1B chr1 197742062 - Exonic hg19 SARC TCGA-X6-A8C6-01A 3 4 Out-of-frame Intra-chr q31.3 59115 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf9-DNM3 C1orf9 chr1 172560211 - DNM3 chr1 172348158 + Exonic hg19 BRCA TCGA-A8-A07U-01A 40 28 In-Frame Intra-chr q24.3 Seq+ 59116 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf9-DNM3 C1orf9 chr1 172502637 - DNM3 chr1 171956796 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 6 5 Out-of-frame Intra-chr q24.3 Seq+ 59117 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf9-PRRC2C C1orf9 chr1 172554226 - PRRC2C chr1 171540459 + Exonic hg19 UCS TCGA-N5-A4RT-01A 2 1 Out-of-frame Intra-chr q24.3 59118 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf9-RASAL2 C1orf9 chr1 172520766 - RASAL2 chr1 178359235 + Exonic hg19 PRAD TCGA-EJ-5518-01A 21 13 Out-of-frame Intra-chr q25.2 Tumor suppressor gene Seq+ 59119 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf9-RP11-362K2.2 C1orf9 chr1 172502637 - RP11-362K2.2 chr12 59206196 + Exonic hg19 SARC TCGA-DX-A1L3-01A 29 13 Out-of-frame Inter-chr 59120 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf9-SND1 C1orf9 chr1 172502637 - SND1 chr7 127714554 + Exonic hg19 UCEC TCGA-B5-A5OD-01A 17 21 Out-of-frame Inter-chr q32.1 59121 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf9-ZCWPW2 C1orf9 chr1 172560211 - ZCWPW2 chr3 28476601 + Exonic hg19 BRCA TCGA-OL-A5D7-01A 4 2 Out-of-frame Inter-chr p24.1 59122 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1orf95-VTI1A C1orf95 chr1 226736807 - VTI1A chr10 114286846 + Exonic hg19 LUAD TCGA-55-6969-01A 2 3 Out-of-frame Inter-chr q25.2 Seq+ 59123 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1QA-CD74 C1QA chr1 22965442 - CD74 chr5 149792314 - Exonic hg19 LUAD TCGA-91-6835-01A 2 1 Out-of-frame Inter-chr p36.12 q33.1 59124 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1QC-ARID1A C1QC chr1 22974380 - ARID1A chr1 27099837 + Exonic hg19 LUAD TCGA-86-8358-01A 2 2 3'UTR-CDS Intra-chr p36.12 p36.11 Oncogene Tumor suppressor gene 59125 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1QL1-SLC16A5 C1QL1 chr17 43044820 - SLC16A5 chr17 73094133 + Exonic hg19 LUSC TCGA-66-2800-01A 19 5 Out-of-frame Intra-chr q21.31 q25.1 Seq+ 59126 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1QTNF3-CLPTM1L C1QTNF3 chr5 34028859 - CLPTM1L chr5 1318568 - Exonic hg19 KIRP TCGA-2Z-A9JJ-01A 12 8 Out-of-frame Intra-chr p13.2 p15.33 Seq+ 59127 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1QTNF6-RAC2 C1QTNF6 chr22 37581258 - RAC2 chr22 37622843 - Exonic hg19 SARC TCGA-FX-A3RE-01A 25 8 In-Frame Intra-chr q12.3 q13.1 Seq+ 59128 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1R-COL6A1 C1R chr12 7241206 - COL6A1 chr21 47412277 + Exonic hg19 MESO TCGA-UT-A88E-01B 2 1 Out-of-frame Inter-chr p13.31 q22.3 59129 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1S-LEPREL2 C1S chr12 7105434 - LEPREL2 chr12 6939023 + Exonic hg19 TGCT TCGA-2G-AAGC-01A 2 2 5'UTR-CDS Intra-chr p13.31 59130 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C1S-NXPH4 C1S chr12 7168181 - NXPH4 chr12 57618661 + Exonic hg19 LIHC TCGA-G3-AAUZ-01A 31 30 5'UTR-CDS Intra-chr p13.31 q13.3 Seq+ 59131 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C20orf112-COMMD7 C20orf112 chr20 31172372 - COMMD7 chr20 31294562 - Exonic hg19 BRCA TCGA-A8-A08L-01A 11 18 Out-of-frame Intra-chr q11.21 Seq+ 59132 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C20orf112-COMMD7 C20orf112 chr20 31071165 - COMMD7 chr20 31315949 - Exonic hg19 BRCA TCGA-E9-A5UP-01A 50 42 5'UTR-CDS Intra-chr q11.21 Seq+ 59133 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C20orf112-EFCAB8 C20orf112 chr20 31043921 - EFCAB8 chr20 31494368 + Exonic hg19 SKCM TCGA-EE-A3AG-06A 9 1 Out-of-frame Intra-chr q11.21 59134 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C20orf112-FAM105A C20orf112 chr20 31040039 - FAM105A chr5 14610250 + Exonic hg19 SARC TCGA-UE-A6QU-01A 2 1 Out-of-frame Inter-chr p15.2 59135 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C20orf12-DTD1 C20orf12 chr20 18429628 - DTD1 chr20 18744004 + Exonic hg19 LUAD TCGA-55-8206-01A 128 92 Out-of-frame Intra-chr p11.23 59136 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C20orf12-DTD1 C20orf12 chr20 18407711 - DTD1 chr20 18724744 + Exonic hg19 COAD TCGA-DM-A0XD-01A 16 6 Out-of-frame Intra-chr p11.23 59137 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C20orf177-PRPF6 C20orf177 chr20 58515590 - PRPF6 chr20 62657292 + Exonic hg19 BRCA TCGA-AR-A254-01A 37 42 Out-of-frame Intra-chr q13.33 59138 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C20orf177-SLC13A2 C20orf177 chr20 58517567 - SLC13A2 chr17 26814428 + Exonic hg19 BRCA TCGA-E2-A1IH-01A 2 3 Out-of-frame Inter-chr q11.2 59139 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C20orf194-ADRA1D C20orf194 chr20 3388122 - ADRA1D chr20 4202777 - Exonic hg19 KICH TCGA-KL-8328-01A 6 3 Out-of-frame Intra-chr p13 p13 Seq+ 59140 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C20orf194-CEACAM16 C20orf194 chr20 3274785 - CEACAM16 chr19 45208860 + Exonic hg19 BRCA TCGA-AR-A1AO-01A 2 2 Out-of-frame Inter-chr p13 q13.31 59141 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C20orf194-EVI5 C20orf194 chr20 3362026 - EVI5 chr1 93170301 - Exonic hg19 LUAD TCGA-73-4662-01A 4 2 Out-of-frame Inter-chr p13 p22.1 59142 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C20orf194-TDRD10 C20orf194 chr20 3354695 - TDRD10 chr1 154514500 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 9 7 In-Frame Inter-chr p13 q21.3 Seq+ 59143 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C20orf196-NCKAP1 C20orf196 chr20 5753689 - NCKAP1 chr2 183868053 - Exonic hg19 BRCA TCGA-E2-A14Z-01A 2 1 Out-of-frame Inter-chr p12.3 q32.1 59144 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C20orf29-RNF24 C20orf29 chr20 3802940 - RNF24 chr20 3928926 - Exonic hg19 BRCA TCGA-AR-A0U3-01A 2 1 Out-of-frame Intra-chr p13 59145 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C20orf3-ZNF337 C20orf3 chr20 24964539 - ZNF337 chr20 25667102 - Exonic hg19 LUAD TCGA-38-6178-01A 15 2 CDS-5'UTR Intra-chr p11.21 Transcription factor 59146 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C20orf43-C20orf152 C20orf43 chr20 55048451 - C20orf152 chr20 34563871 + Exonic hg19 PRAD TCGA-V1-A9ZG-01A 3 3 Out-of-frame Intra-chr 59147 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C20orf43-PARD6B C20orf43 chr20 55043822 - PARD6B chr20 49366196 + Exonic hg19 BRCA TCGA-C8-A273-01A 7 9 Out-of-frame Intra-chr q13.13 59148 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C20orf43-TSHZ2 C20orf43 chr20 55059245 - TSHZ2 chr20 52103683 + Exonic hg19 BRCA TCGA-BH-A0H7-01A 58 44 CDS-3'UTR Intra-chr q13.2 Transcription factor Seq+ 59149 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C20orf94-CDS2 C20orf94 chr20 10582467 - CDS2 chr20 5154169 + Exonic hg19 HNSC TCGA-CX-7082-01A 4 3 In-Frame Intra-chr p12.3 59150 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C20orf94-PLCB1 C20orf94 chr20 10416101 - PLCB1 chr20 8737693 + Exonic hg19 SARC TCGA-DX-AB35-01A 3 1 5'UTR-CDS Intra-chr p12.3 59151 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C20orf94-SLC24A3 C20orf94 chr20 10438879 - SLC24A3 chr20 19261603 + Exonic hg19 HNSC TCGA-CV-5436-01A 10 5 Out-of-frame Intra-chr p11.23 59152 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C21orf2-UMODL1 C21orf2 chr21 45759001 - UMODL1 chr21 43562206 + Exonic hg19 PRAD TCGA-M7-A725-01A 55 36 CDS-3'UTR Intra-chr q22.3 q22.3 Seq+ 59153 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C21orf56-DSCR8 C21orf56 chr21 47604270 - DSCR8 chr21 39494406 + Exonic hg19 CESC TCGA-VS-A94Y-01A 5 1 5'UTR-5'UTR Intra-chr q22.13 59154 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C21orf56-IGF1 C21orf56 chr21 47604270 - IGF1 chr12 102813468 - Exonic hg19 SARC TCGA-3B-A9HO-01A 34 16 5'UTR-CDS Inter-chr q23.2 Tumor suppressor gene 59155 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C21orf63-ABCG1 C21orf63 chr21 33785321 - ABCG1 chr21 43691180 + Exonic hg19 STAD TCGA-BR-A4CS-01A 3 26 Out-of-frame Intra-chr q22.3 59156 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C21orf63-C20orf132 C21orf63 chr21 33785321 - C20orf132 chr20 35742548 - Exonic hg19 LUAD TCGA-44-A479-01A 4 6 Out-of-frame Inter-chr 59157 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C21orf63-CBR3 C21orf63 chr21 33825816 - CBR3 chr21 37518374 + Exonic hg19 PRAD TCGA-KK-A6E1-01A 10 17 Out-of-frame Intra-chr q22.12 59158 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C21orf63-CEP112 C21orf63 chr21 33840156 - CEP112 chr17 63923807 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 3 2 Out-of-frame Inter-chr q24.1 59159 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C21orf63-MRAP C21orf63 chr21 33867480 - MRAP chr21 33683995 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 19 20 Out-of-frame Intra-chr q22.11 59160 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C21orf63-TCP10L C21orf63 chr21 33785321 - TCP10L chr21 33954725 - Exonic hg19 MESO TCGA-TS-A7OZ-01A 3 4 Out-of-frame Intra-chr q22.11 59161 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C21orf70-FER C21orf70 chr21 46380083 - FER chr5 108436097 + Exonic hg19 SARC TCGA-K1-A6RU-01A 3 3 Out-of-frame Inter-chr q21.3 TK:Fer 59162 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C21orf90-GABRA3 C21orf90 chr21 45937718 - GABRA3 chrX 151453207 - Exonic hg19 KIRC TCGA-CJ-5681-01A 24 22 5'UTR-CDS Inter-chr q28 Seq+ 59163 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C21orf91-GLT25D2 C21orf91 chr21 19190509 - GLT25D2 chr1 183914698 - Exonic hg19 SARC TCGA-DX-A2J0-01A 50 14 Out-of-frame Inter-chr q21.1 Seq+ 59164 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C22orf13-MB C22orf13 chr22 24951583 - MB chr22 36003490 - Exonic hg19 UVM TCGA-VD-A8KE-01A 3 7 5'UTR-CDS Intra-chr q12.3 59165 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C22orf13-TMEM211 C22orf13 chr22 24951583 - TMEM211 chr22 25334254 - Exonic hg19 PAAD TCGA-L1-A7W4-01A 30 7 5'UTR-5'UTR Intra-chr q11.23 59166 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C22orf28-FAM83F C22orf28 chr22 32802649 - FAM83F chr22 40425520 + Exonic hg19 SKCM TCGA-EB-A3Y6-01A 32 20 In-Frame Intra-chr q13.1 Seq+ 59167 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C22orf32-NFAM1 C22orf32 chr22 42475958 - NFAM1 chr22 42783084 - Exonic hg19 LUAD TCGA-44-6147-01A 5 3 In-Frame Intra-chr q13.2 Seq+ 59168 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C22orf34-HDAC10 C22orf34 chr22 50020491 - HDAC10 chr22 50689334 - Exonic hg19 STAD TCGA-BR-4357-01A 9 7 3'UTR-CDS Intra-chr q13.33 q13.33 59169 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C22orf34-ZBED4 C22orf34 chr22 50051053 - ZBED4 chr22 50276982 + Exonic hg19 LAML TCGA-AB-2807-03A 2 1 3'UTR-5'UTR Intra-chr q13.33 q13.33 Transcription factor 59170 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C2CD2-MID2 C2CD2 chr21 43373479 - MID2 chrX 107083900 + Exonic hg19 KIRC TCGA-CJ-5681-01A 4 3 Out-of-frame Inter-chr q22.3 q22.3 Seq+ 59171 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C2CD2-SH3BGRL C2CD2 chr21 43362256 - SH3BGRL chrX 80532483 + Exonic hg19 UCS TCGA-ND-A4W6-01A 9 7 In-Frame Inter-chr q22.3 q21.1 Seq+ 59172 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C2CD2-ZNF295 C2CD2 chr21 43332441 - ZNF295 chr21 43423070 - Exonic hg19 BRCA TCGA-A1-A0SO-01A 3 2 CDS-5'UTR Intra-chr q22.3 59173 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C2CD2L-DDX10 C2CD2L chr11 118985075 - DDX10 chr11 108709173 + Exonic hg19 LAML TCGA-AB-2857-03A 2 2 Out-of-frame Intra-chr q23.3 q22.3 59174 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C2CD3-ABCA13 C2CD3 chr11 73843889 - ABCA13 chr7 48520633 + Exonic hg19 BRCA TCGA-A8-A091-01A 7 8 Out-of-frame Inter-chr q13.4 p12.3 Seq+ 59175 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C2CD3-NCAM1 C2CD3 chr11 73739332 - NCAM1 chr11 113073101 + Exonic hg19 LUAD TCGA-67-3774-01A 3 1 3'UTR-CDS Intra-chr q13.4 q23.2 59176 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C2CD3-ODZ4 C2CD3 chr11 73739332 - ODZ4 chr11 78383374 - Exonic hg19 BRCA TCGA-A7-A4SB-01A 19 8 3'UTR-CDS Intra-chr q13.4 59177 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C2CD3-P2RY6 C2CD3 chr11 73829273 - P2RY6 chr11 73007530 + Exonic hg19 BRCA TCGA-E2-A109-01A 14 9 CDS-5'UTR Intra-chr q13.4 q13.4 Seq+ 59178 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C2CD3-PC C2CD3 chr11 73879389 - PC chr11 66639630 - Exonic hg19 SKCM TCGA-XV-A9W5-01A 11 7 CDS-5'UTR Intra-chr q13.4 q13.2 Seq+ 59179 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C2CD3-RNF169 C2CD3 chr11 73879389 - RNF169 chr11 74500671 + Exonic hg19 BRCA TCGA-AR-A1AV-01A 7 8 In-Frame Intra-chr q13.4 q13.4 Seq+ 59180 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C2CD3-SYTL1 C2CD3 chr11 73849765 - SYTL1 chr1 27671788 + Exonic hg19 OV TCGA-09-2048-01A 2 5 CDS-5'UTR Inter-chr q13.4 p36.11 Seq+ 59181 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C2CD3-VPS37C C2CD3 chr11 73753099 - VPS37C chr11 60906307 - Exonic hg19 READ TCGA-DC-6158-01A 11 7 CDS-5'UTR Intra-chr q13.4 q12.2 Seq+ 59182 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C2CD3-XRRA1 C2CD3 chr11 73879389 - XRRA1 chr11 74559507 - Exonic hg19 STAD TCGA-CG-4449-01A 4 3 Out-of-frame Intra-chr q13.4 q13.4 59183 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C2orf15-TSGA10 C2orf15 chr2 99804720 - TSGA10 chr2 99743639 - Exonic hg19 UCS TCGA-NG-A4VU-01A 27 7 3'UTR-5'UTR Intra-chr q11.2 q11.2 Seq+ 59184 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C2orf43-MBOAT2 C2orf43 chr2 20990015 - MBOAT2 chr2 9022695 - Exonic hg19 UCEC TCGA-AX-A3G3-01A 8 1 In-Frame Intra-chr p25.1 59185 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C2orf43-RTN4 C2orf43 chr2 20939731 - RTN4 chr2 55214834 - Exonic hg19 SKCM TCGA-EB-A3XC-01A 17 7 In-Frame Intra-chr p16.1 Tumor suppressor gene Seq+ 59186 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C2orf61-ALK C2orf61 chr2 47357080 - ALK chr2 29754982 - Exonic hg19 OV TCGA-23-1027-01A 2 2 Out-of-frame Intra-chr p23.1 TK:ALK Oncogene 59187 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C2orf63-FAM98A C2orf63 chr2 55459372 - FAM98A chr2 33812387 - Exonic hg19 PRAD TCGA-HC-A48F-01A 5 14 5'UTR-CDS Intra-chr p22.3 Seq+ 59188 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C2orf67-ACADL C2orf67 chr2 210968828 - ACADL chr2 211085526 - Exonic hg19 KIRC TCGA-B2-3923-01A 2 1 Out-of-frame Intra-chr q34 59189 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C2orf67-ERBB4 C2orf67 chr2 210993755 - ERBB4 chr2 212495319 - Exonic hg19 BRCA TCGA-D8-A27M-01A 3 1 Out-of-frame Intra-chr q34 Oncogene Tumor suppressor gene 59190 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C2orf76-ACOXL C2orf76 chr2 120097403 - ACOXL chr2 111542309 + Exonic hg19 LUSC TCGA-85-7696-01A 2 2 Out-of-frame Intra-chr q14.2 q13 59191 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C2orf76-ANKRD46 C2orf76 chr2 120124366 - ANKRD46 chr8 101542088 - Exonic hg19 CHOL TCGA-ZH-A8Y2-01A 9 5 5'UTR-5'UTR Inter-chr q14.2 q22.3 Seq+ 59192 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3-ABCF1 C3 chr19 6677846 - ABCF1 chr6 30545853 + Exonic hg19 LIHC TCGA-DD-A4NR-01A 2 2 3'UTR-CDS Inter-chr p13.3 59193 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3-DDX21 C3 chr19 6677846 - DDX21 chr10 70723858 + Exonic hg19 LIHC TCGA-DD-AACA-02A 2 8 3'UTR-CDS Inter-chr p13.3 q22.1 59194 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3-ELK3 C3 chr19 6677846 - ELK3 chr12 96588323 + Exonic hg19 THCA TCGA-EL-A3D1-01A 2 19 3'UTR-5'UTR Inter-chr p13.3 q23.1 Transcription factor 59195 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3-MFN1 C3 chr19 6677846 - MFN1 chr3 179096011 + Exonic hg19 LIHC TCGA-DD-A1EC-01A 2 7 3'UTR-CDS Inter-chr p13.3 q26.33 59196 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3-RABEP1 C3 chr19 6677846 - RABEP1 chr17 5283828 + Exonic hg19 LGG TCGA-DH-5142-01A 2 8 3'UTR-CDS Inter-chr p13.3 p13.2 59197 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3-SEC63 C3 chr19 6677846 - SEC63 chr6 108214782 - Exonic hg19 UCS TCGA-N8-A4PP-01A 2 5 3'UTR-CDS Inter-chr p13.3 q21 59198 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3-SUPT16H C3 chr19 6677846 - SUPT16H chr14 21829491 - Exonic hg19 CESC TCGA-Q1-A5R1-01A 2 9 3'UTR-CDS Inter-chr p13.3 q11.2 59199 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3-ZNF556 C3 chr19 6690640 - ZNF556 chr19 2873494 + Exonic hg19 ESCA TCGA-JY-A938-01A 3 22 In-Frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 59200 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3orf21-ETV5 C3orf21 chr3 194877178 - ETV5 chr3 185783861 - Exonic hg19 SARC TCGA-VT-A80G-01A 4 8 Out-of-frame Intra-chr q27.2 Oncogene Transcription factor 59201 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3orf21-OSTN C3orf21 chr3 194991284 - OSTN chr3 190936536 + Exonic hg19 HNSC TCGA-UF-A71A-06A 8 2 Out-of-frame Intra-chr q28 59202 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3orf21-TPRG1 C3orf21 chr3 194877178 - TPRG1 chr3 189028175 + Exonic hg19 LUSC TCGA-22-4591-01A 4 4 Out-of-frame Intra-chr q28 59203 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3orf25-MBD4 C3orf25 chr3 129134088 - MBD4 chr3 129152979 - Exonic hg19 OV TCGA-24-1557-01A 18 3 In-Frame Intra-chr q21.3 Tumor suppressor gene Transcription factor 59204 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3orf26-ENPP6 C3orf26 chr3 99536887 - ENPP6 chr4 185074886 - Exonic hg19 PRAD TCGA-KK-A6E8-01A 3 3 In-Frame Inter-chr q35.1 59205 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3orf26-KRT1 C3orf26 chr3 99536887 - KRT1 chr12 53072540 - Exonic hg19 SARC TCGA-DX-A23Y-01A 20 2 Out-of-frame Inter-chr q13.13 59206 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3orf26-XRRA1 C3orf26 chr3 99536887 - XRRA1 chr11 74618318 - Exonic hg19 BRCA TCGA-BH-A0HY-01A 14 9 Out-of-frame Inter-chr q13.4 59207 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3orf37-TYK2 C3orf37 chr3 129024105 - TYK2 chr19 10491352 - Exonic hg19 KIRP TCGA-G7-7502-01A 2 3 Out-of-frame Inter-chr p13.2 TK:JakA 59208 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3orf38-RP11-159G9.5 C3orf38 chr3 88199335 - RP11-159G9.5 chr3 88135407 + Exonic hg19 SKCM TCGA-EE-A2M5-06A 3 2 Out-of-frame Intra-chr p11.1 59209 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3orf52-CD86 C3orf52 chr3 111821812 - CD86 chr3 121836895 + Exonic hg19 LUSC TCGA-58-A46L-01A 2 1 Out-of-frame Intra-chr q13.2 q13.33 Seq+ 59210 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3orf52-GCET2 C3orf52 chr3 111828460 - GCET2 chr3 111846908 - Exonic hg19 BRCA TCGA-E9-A1ND-01A 7 2 In-Frame Intra-chr q13.2 59211 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3orf55-CHRD C3orf55 chr3 157261298 - CHRD chr3 184106375 + Exonic hg19 LUSC TCGA-39-5019-01A 11 2 5'UTR-CDS Intra-chr q27.1 Seq+ 59212 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3orf55-KCNAB1 C3orf55 chr3 157271129 - KCNAB1 chr3 155836000 + Exonic hg19 STAD TCGA-CG-4449-01A 7 10 Out-of-frame Intra-chr q25.31 Seq+ 59213 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3orf64-SYNPR C3orf64 chr3 69047162 - SYNPR chr3 63466508 + Exonic hg19 MESO TCGA-UT-A88C-01B 2 1 In-Frame Intra-chr p14.2 59214 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3orf67-FHIT C3orf67 chr3 58899434 - FHIT chr3 59738047 - Exonic hg19 SKCM TCGA-ER-A2NB-01A 2 6 Out-of-frame Intra-chr p14.2 p14.2 Tumor suppressor gene 59215 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3orf70-TPRG1 C3orf70 chr3 184870416 - TPRG1 chr3 188844846 + Exonic hg19 BRCA TCGA-E2-A1L7-01A 3 2 CDS-5'UTR Intra-chr q27.2 q28 Seq+ 59216 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3orf72-PROS1 C3orf72 chr3 138666306 - PROS1 chr3 93646251 - Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 9 4 In-Frame Intra-chr q11.1 Seq+ 59217 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3orf78-NISCH C3orf78 chr3 52570789 - NISCH chr3 52504875 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 10 3 Out-of-frame Intra-chr p21.1 59218 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C3orf78-STAB1 C3orf78 chr3 52570922 - STAB1 chr3 52535182 + Exonic hg19 UCS TCGA-N5-A4RN-01A 3 3 Out-of-frame Intra-chr p21.1 59219 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C4orf14-N4BP1 C4orf14 chr4 57839314 - N4BP1 chr16 48596355 - Exonic hg19 BRCA TCGA-AO-A03L-01A 5 1 Out-of-frame Inter-chr q12.1 59220 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C4orf14-PPP3CA C4orf14 chr4 57832786 - PPP3CA chr4 102117273 - Exonic hg19 BRCA TCGA-AO-A12D-01A 2 3 Out-of-frame Intra-chr q24 59221 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C4orf19-AC021860.1 C4orf19 chr4 37559698 - AC021860.1 chr4 38637679 - Exonic hg19 SARC TCGA-DX-A1L0-01A 2 2 Out-of-frame Intra-chr p14 p14 59222 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C4orf29-SLC25A31 C4orf29 chr4 128910976 - SLC25A31 chr4 128694541 + Exonic hg19 PRAD TCGA-J9-A8CL-01A 11 17 Out-of-frame Intra-chr q28.1 Seq+ 59223 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C4orf34-PDS5A C4orf34 chr4 39640359 - PDS5A chr4 39868617 - Exonic hg19 BLCA TCGA-DK-AA6S-01A 3 5 5'UTR-CDS Intra-chr p14 59224 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C4orf41-ING2 C4orf41 chr4 184600639 - ING2 chr4 184431435 + Exonic hg19 HNSC TCGA-UF-A7JA-01A 3 4 Out-of-frame Intra-chr q35.1 Tumor suppressor gene 59225 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C4orf41-KCNN4 C4orf41 chr4 184589270 - KCNN4 chr19 44276287 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 14 6 Out-of-frame Inter-chr q13.31 59226 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C4orf41-RBM46 C4orf41 chr4 184614890 - RBM46 chr4 155741515 + Exonic hg19 PRAD TCGA-EJ-5504-01A 2 4 Out-of-frame Intra-chr q32.1 59227 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C4orf45-MARCH1 C4orf45 chr4 159881438 - 2019_ 3_ 1_ chr4 164534545 - Exonic hg19 SKCM TCGA-W3-A825-06A 2 1 Out-of-frame Intra-chr q32.1 q32.3 59228 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C5-DBC1 C5 chr9 123794391 - DBC1 chr9 121930502 - Exonic hg19 PRAD TCGA-HC-7821-01A 7 2 Out-of-frame Intra-chr q33.2 Tumor suppressor gene 59229 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C5-SEMA4D C5 chr9 123837032 - SEMA4D chr9 92070868 - Exonic hg19 PRAD TCGA-XQ-A8TA-01A 7 3 5'UTR-5'UTR Intra-chr q33.2 q22.2 59230 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C5orf13-COMMD10 C5orf13 chr5 111091467 - COMMD10 chr5 115469765 + Exonic hg19 KIRC TCGA-A3-3376-01A 26 43 Out-of-frame Intra-chr q23.1 59231 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C5orf41-SLIT3 C5orf41 chr5 172483482 - SLIT3 chr5 168271660 - Exonic hg19 LUAD TCGA-49-4505-01A 4 1 Out-of-frame Intra-chr q35.1 59232 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C5orf42-NPR3 C5orf42 chr5 37153842 - NPR3 chr5 32774814 + Exonic hg19 HNSC TCGA-CQ-7067-01A 4 1 In-Frame Intra-chr p13.2 p13.3 59233 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C5orf42-NUP155 C5orf42 chr5 37221426 - NUP155 chr5 37304945 - Exonic hg19 BRCA TCGA-A2-A04Q-01A 5 1 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 59234 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C5orf42-NUP155 C5orf42 chr5 37227670 - NUP155 chr5 37301652 - Exonic hg19 BRCA TCGA-BH-A8FZ-01A 5 4 In-Frame Intra-chr p13.2 p13.2 Seq+ 59235 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C5orf42-SEMA5A C5orf42 chr5 37165641 - SEMA5A chr5 9238002 - Exonic hg19 SKCM TCGA-D3-A1Q3-06A 9 6 In-Frame Intra-chr p13.2 p15.31 Seq+ 59236 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C5orf45-APOA2 C5orf45 chr5 179263802 - APOA2 chr1 161193418 - Exonic hg19 LIHC TCGA-BW-A5NQ-01A 10 1 3'UTR-5'UTR Inter-chr q23.3 59237 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C5orf45-APOA2 C5orf45 chr5 179263802 - APOA2 chr1 161193418 - Exonic hg19 LIHC TCGA-DD-AACJ-01A 7 1 3'UTR-5'UTR Inter-chr q23.3 59238 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C5orf45-APOA2 C5orf45 chr5 179263802 - APOA2 chr1 161193418 - Exonic hg19 LIHC TCGA-ZS-A9CE-01A 4 1 3'UTR-5'UTR Inter-chr q23.3 59239 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C5orf45-RNF130 C5orf45 chr5 179268907 - RNF130 chr5 179440311 - Exonic hg19 PRAD TCGA-KK-A8ID-01A 4 6 Out-of-frame Intra-chr q35.3 Seq+ 59240 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C5orf56-CCDC101 C5orf56 chr5 131755632 - CCDC101 chr16 28592376 + Exonic hg19 ACC TCGA-OR-A5JZ-01A 25 15 5'UTR-5'UTR Inter-chr q31.1 Seq+ 59241 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C5orf56-CTIF C5orf56 chr5 131755632 - CTIF chr18 46343592 + Exonic hg19 UCEC TCGA-DF-A2KR-01A 4 1 5'UTR-CDS Inter-chr q31.1 Seq+ 59242 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf106-FKBP5 C6orf106 chr6 34664223 - FKBP5 chr6 35610620 - Exonic hg19 UCS TCGA-N6-A4VE-01A 48 20 CDS-5'UTR Intra-chr p21.31 p21.31 Seq+ 59243 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf106-KIF6 C6orf106 chr6 34664223 - KIF6 chr6 39398937 - Exonic hg19 OV TCGA-61-2008-02A 3 8 Out-of-frame Intra-chr p21.31 p21.2 Seq+ 59244 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf106-LRRC1 C6orf106 chr6 34614378 - LRRC1 chr6 53785423 + Exonic hg19 KIRC TCGA-A3-3313-01A 85 48 In-Frame Intra-chr p21.31 p12.1 Seq+ 59245 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf106-PINX1 C6orf106 chr6 34614378 - PINX1 chr8 10623426 - Exonic hg19 STAD TCGA-VQ-AA6I-01A 13 94 Out-of-frame Inter-chr p21.31 p23.1 Tumor suppressor gene Seq+ 59246 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf132-GUCA1B C6orf132 chr6 42077954 - GUCA1B chr6 42156469 - Exonic hg19 BLCA TCGA-DK-A3IT-01A 3 5 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 59247 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf138-CD2AP C6orf138 chr6 47976370 - CD2AP chr6 47471016 + Exonic hg19 KIRC TCGA-A3-3313-01A 57 40 Out-of-frame Intra-chr p12.3 59248 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf168-ASCC3 C6orf168 chr6 99796983 - ASCC3 chr6 100988263 - Exonic hg19 PRAD TCGA-KK-A8ID-01A 8 8 Out-of-frame Intra-chr q16.3 59249 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf168-ASCC3 C6orf168 chr6 99790774 - ASCC3 chr6 100960794 - Exonic hg19 PAAD TCGA-L1-A7W4-01A 12 4 Out-of-frame Intra-chr q16.3 59250 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf168-C12orf28 C6orf168 chr6 99781227 - C12orf28 chr12 70249060 + Exonic hg19 SARC TCGA-HB-A3YV-01A 3 1 Out-of-frame Inter-chr 59251 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf170-RPF2 C6orf170 chr6 121624763 - RPF2 chr6 111345386 + Exonic hg19 SARC TCGA-DX-A3U6-01A 4 4 Out-of-frame Intra-chr q21 59252 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf170-RSPO3 C6orf170 chr6 121411999 - RSPO3 chr6 127469793 + Exonic hg19 BLCA TCGA-FD-A3SS-01A 3 2 Out-of-frame Intra-chr q22.33 59253 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf186-BYSL C6orf186 chr6 110643977 - BYSL chr6 41895112 + Exonic hg19 LUSC TCGA-43-A475-01A 43 21 Out-of-frame Intra-chr p21.1 59254 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf186-REPS1 C6orf186 chr6 110679158 - REPS1 chr6 139251235 - Exonic hg19 SARC TCGA-HB-A3YV-01A 5 6 Out-of-frame Intra-chr q24.1 59255 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf186-SLC22A16 C6orf186 chr6 110620125 - SLC22A16 chr6 110778220 - Exonic hg19 LUAD TCGA-38-4630-01A 38 16 Out-of-frame Intra-chr q21 59256 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf186-TBPL1 C6orf186 chr6 110620125 - TBPL1 chr6 134301220 + Exonic hg19 UCEC TCGA-AJ-A3IA-01A 2 1 Out-of-frame Intra-chr q23.2 Transcription factor 59257 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf192-TRMT11 C6orf192 chr6 133118121 - TRMT11 chr6 126342306 + Exonic hg19 UVM TCGA-VD-A8KJ-01A 24 17 Out-of-frame Intra-chr q22.32 59258 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf203-BEND3 C6orf203 chr6 107361434 - BEND3 chr6 107392154 - Exonic hg19 BRCA TCGA-BH-A1FE-01A 3 7 Out-of-frame Intra-chr q21 q21 Seq+ 59259 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf204-CSMD1 C6orf204 chr6 118953616 - CSMD1 chr8 3072213 - Exonic hg19 SARC TCGA-DX-A3LS-01A 10 2 Out-of-frame Inter-chr p23.2 Tumor suppressor gene 59260 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf204-EYS C6orf204 chr6 118886692 - EYS chr6 65303202 - Exonic hg19 LGG TCGA-TM-A7CF-02A 3 1 Out-of-frame Intra-chr q12 59261 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf204-JAK2 C6orf204 chr6 118886692 - JAK2 chr9 4985940 + Exonic hg19 SARC TCGA-DX-A3LS-01A 3 3 Out-of-frame Inter-chr p24.1 TK:JakA Oncogene 59262 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf204-ROS1 C6orf204 chr6 118802942 - ROS1 chr6 117641193 - Exonic hg19 GBM TCGA-06-5418-01A 5 6 Out-of-frame Intra-chr q22.1 Oncogene 59263 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf204-SYTL3 C6orf204 chr6 118953616 - SYTL3 chr6 159166512 + Exonic hg19 GBM TCGA-14-2554-01A 10 17 Out-of-frame Intra-chr q25.3 59264 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf204-TMEM120B C6orf204 chr6 118886692 - TMEM120B chr12 122181535 + Exonic hg19 SARC TCGA-DX-A3LS-01A 7 5 Out-of-frame Inter-chr q24.31 59265 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf222-ETV7 C6orf222 chr6 36293060 - ETV7 chr6 36322464 - Exonic hg19 COAD TCGA-D5-6530-01A 76 30 Out-of-frame Intra-chr p21.31 p21.31 Transcription factor Seq+ 59266 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf35-ARID1B C6orf35 chr6 157739814 - ARID1B chr6 157256600 + Exonic hg19 LUAD TCGA-97-8177-01A 8 4 Out-of-frame Intra-chr q25.3 Oncogene 59267 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf35-PREP C6orf35 chr6 157739814 - PREP chr6 105845802 - Exonic hg19 THCA TCGA-CE-A13K-01A 5 5 Out-of-frame Intra-chr q21 59268 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf48-GNB5 C6orf48 chr6 31805212 - GNB5 chr15 52446273 - Exonic hg19 LIHC TCGA-DD-A115-01A 3 6 Out-of-frame Inter-chr q21.2 Seq+ 59269 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf52-DST C6orf52 chr6 10694727 - DST chr6 56765419 - Exonic hg19 SARC TCGA-PC-A5DN-01A 5 4 5'UTR-5'UTR Intra-chr p24.2 p12.1 Oncogene Seq+ 59270 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf57-SH3BGRL2 C6orf57 chr6 71289269 - SH3BGRL2 chr6 80383331 + Exonic hg19 SKCM TCGA-EB-A44Q-06A 7 8 Out-of-frame Intra-chr q14.1 Seq+ 59271 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf62-FAM65B C6orf62 chr6 24716376 - FAM65B chr6 24818853 - Exonic hg19 LUSC TCGA-18-3415-01A 34 17 In-Frame Intra-chr p22.3 Seq+ 59272 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf62-MRS2 C6orf62 chr6 24714546 - MRS2 chr6 24423812 + Exonic hg19 SKCM TCGA-EE-A2GP-06A 56 33 In-Frame Intra-chr p22.3 p22.3 Seq+ 59273 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf64-PACSIN1 C6orf64 chr6 39077090 - PACSIN1 chr6 34496419 + Exonic hg19 LGG TCGA-DU-7015-01A 2 2 Out-of-frame Intra-chr p21.31 59274 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C6orf72-PPIL4 C6orf72 chr6 149887670 - PPIL4 chr6 149862567 - Exonic hg19 DLBC TCGA-FA-A86F-01A 6 8 In-Frame Intra-chr q25.1 59275 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C7orf10-POU6F2 C7orf10 chr7 40535985 - POU6F2 chr7 39446199 + Exonic hg19 BRCA TCGA-A7-A26G-01A 2 1 In-Frame Intra-chr p14.1 Tumor suppressor gene Transcription factor 59276 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C7orf10-RALA C7orf10 chr7 40174719 - RALA chr7 39726230 + Exonic hg19 TGCT TCGA-2G-AAF6-01A 3 9 CDS-5'UTR Intra-chr p14.1 Seq+ 59277 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C7orf11-TRA2A C7orf11 chr7 40173828 - TRA2A chr7 23556147 - Exonic hg19 BRCA TCGA-A2-A04P-01A 3 4 Out-of-frame Intra-chr p15.3 59278 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C7orf26-GRID2IP C7orf26 chr7 6634231 - GRID2IP chr7 6566400 - Exonic hg19 STAD TCGA-CG-4449-01A 2 7 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 59279 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C7orf30-GPNMB C7orf30 chr7 23347568 - GPNMB chr7 23306136 + Exonic hg19 SKCM TCGA-BF-AAP1-01A 256 190 Out-of-frame Intra-chr p15.3 59280 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C7orf36-ALS2 C7orf36 chr7 39610226 - ALS2 chr2 202614512 - Exonic hg19 PRAD TCGA-V1-A9ZG-01A 12 6 Out-of-frame Inter-chr q33.1 59281 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C7orf36-GJC3 C7orf36 chr7 39606146 - GJC3 chr7 99521226 - Exonic hg19 CESC TCGA-C5-A7UC-01A 14 5 Out-of-frame Intra-chr q22.1 59282 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C7orf42-ATOH8 C7orf42 chr7 66407011 - ATOH8 chr2 85991114 + Exonic hg19 ACC TCGA-OR-A5KY-01A 8 7 In-Frame Inter-chr p11.2 Transcription factor 59283 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C7orf44-AMPH C7orf44 chr7 43769028 - AMPH chr7 38574611 - Exonic hg19 PRAD TCGA-TP-A8TV-01A 15 17 5'UTR-CDS Intra-chr p14.1 Seq+ 59284 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C7orf44-BLVRA C7orf44 chr7 43769028 - BLVRA chr7 43810737 + Exonic hg19 UCEC TCGA-AJ-A3BF-01A 6 5 5'UTR-5'UTR Intra-chr p13 Seq+ 59285 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C7orf44-GCK C7orf44 chr7 43769028 - GCK chr7 44193062 - Exonic hg19 PRAD TCGA-ZG-A9L6-01A 5 3 5'UTR-CDS Intra-chr p13 STE:STE20 59286 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C7orf44-HECW1 C7orf44 chr7 43769028 - HECW1 chr7 43580762 + Exonic hg19 GBM TCGA-06-0210-01A 2 16 5'UTR-CDS Intra-chr p14.1 Seq+ 59287 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C7orf44-MRPS24 C7orf44 chr7 43769028 - MRPS24 chr7 43908673 - Exonic hg19 BRCA TCGA-AO-A0J5-01A 7 18 5'UTR-CDS Intra-chr p13 59288 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C7orf46-KLHL7 C7orf46 chr7 23731215 - KLHL7 chr7 23157453 + Exonic hg19 DLBC TCGA-GS-A9TY-01A 5 4 Out-of-frame Intra-chr p15.3 59289 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C7orf46-MUC4 C7orf46 chr7 23729078 - MUC4 chr3 195481243 - Exonic hg19 BRCA TCGA-AQ-A04L-01B 2 3 Out-of-frame Inter-chr 59290 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C7orf50-CD177 C7orf50 chr7 1166893 - CD177 chr19 43858005 + Exonic hg19 KIRP TCGA-B9-A44B-01A 11 5 Out-of-frame Inter-chr p22.3 q13.31 Seq+ 59291 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C7orf50-INTS1 C7orf50 chr7 1166893 - INTS1 chr7 1535900 - Exonic hg19 COAD TCGA-G4-6626-01A 3 5 In-Frame Intra-chr p22.3 p22.3 Seq+ 59292 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C7orf50-MAD1L1 C7orf50 chr7 1166893 - MAD1L1 chr7 2041756 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 47 30 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 59293 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C7orf50-MAD1L1 C7orf50 chr7 1166893 - MAD1L1 chr7 1855864 - Exonic hg19 ESCA TCGA-L5-A4OQ-01A 5 64 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 59294 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C7orf50-MAD1L1 C7orf50 chr7 1166893 - MAD1L1 chr7 1855864 - Exonic hg19 UCS TCGA-NA-A4R0-01A 28 27 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 59295 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C7orf50-MMD2 C7orf50 chr7 1166893 - MMD2 chr7 4965163 - Exonic hg19 PRAD TCGA-KK-A8ID-01A 6 5 Out-of-frame Intra-chr p22.3 p22.1 59296 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C7orf57-C7orf10 C7orf57 chr7 48089574 - C7orf10 chr7 40535883 + Exonic hg19 SKCM TCGA-DA-A95V-06A 4 1 In-Frame Intra-chr p12.3 59297 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C7orf70-SCGB1A1 C7orf70 chr7 6388204 - SCGB1A1 chr11 62189693 + Exonic hg19 SARC TCGA-DX-A1KY-01A 176 94 Out-of-frame Inter-chr q12.3 59298 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C7orf73-BRAF C7orf73 chr7 135357554 - BRAF chr7 140487384 - Exonic hg19 PRAD TCGA-EJ-A8FN-01A 10 10 In-Frame Intra-chr q33 q34 TKL:RAF Oncogene 59299 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C8orf34-MET C8orf34 chr8 69351881 - MET chr7 116414935 + Exonic hg19 KIRP TCGA-GL-7773-01A 66 51 In-Frame Inter-chr q13.2 q31.2 TK:Met Oncogene Seq+ 59300 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C8orf38-INTS8 C8orf38 chr8 95970407 - INTS8 chr8 95885602 + Exonic hg19 BLCA TCGA-E7-A85H-01A 13 2 5'UTR-CDS Intra-chr q22.1 59301 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C8orf38-LRRCC1 C8orf38 chr8 95993201 - LRRCC1 chr8 86042154 + Exonic hg19 SKCM TCGA-D3-A1Q4-06A 30 8 5'UTR-CDS Intra-chr q21.2 59302 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C8orf38-MYC C8orf38 chr8 95908155 - MYC chr8 128750494 + Exonic hg19 UCEC TCGA-AJ-A3I9-01A 10 13 5'UTR-CDS Intra-chr q24.21 Oncogene Transcription factor 59303 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C8orf47-MATN2 C8orf47 chr8 99076955 - MATN2 chr8 99042690 + Exonic hg19 LIHC TCGA-BC-A10Y-01A 61 18 In-Frame Intra-chr q22.1 Seq+ 59304 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C8orf76-ATAD2 C8orf76 chr8 124238740 - ATAD2 chr8 124335306 - Exonic hg19 BLCA TCGA-4Z-AA7Q-01A 8 4 In-Frame Intra-chr q24.13 q24.13 Seq+ 59305 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C8orf76-ATAD2 C8orf76 chr8 124250038 - ATAD2 chr8 124351686 - Exonic hg19 KIRC TCGA-BP-4962-01A 2 4 In-Frame Intra-chr q24.13 q24.13 Seq+ 59306 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C8orf76-ATAD2 C8orf76 chr8 124253470 - ATAD2 chr8 124361684 - Exonic hg19 PRAD TCGA-HC-7233-01A 2 2 Out-of-frame Intra-chr q24.13 q24.13 Seq+ 59307 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C8orf76-NKAIN3 C8orf76 chr8 124238740 - NKAIN3 chr8 63492098 + Exonic hg19 BRCA TCGA-AO-A0J4-01A 5 3 In-Frame Intra-chr q24.13 q12.3 Seq+ 59308 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C8orf83-RAD54B C8orf83 chr8 93904217 - RAD54B chr8 95423543 - Exonic hg19 BRCA TCGA-AQ-A04J-01A 3 3 Out-of-frame Intra-chr q22.1 59309 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C9orf102-ATP8A1 C9orf102 chr9 98718295 - ATP8A1 chr4 42526864 - Exonic hg19 PRAD TCGA-CH-5751-01A 4 2 Out-of-frame Inter-chr p13 59310 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C9orf102-GTF3C4 C9orf102 chr9 98703831 - GTF3C4 chr9 135553364 + Exonic hg19 LGG TCGA-HT-7483-01A 10 6 Out-of-frame Intra-chr q34.13 59311 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C9orf102-IPPK C9orf102 chr9 98732938 - IPPK chr9 95397590 - Exonic hg19 PRAD TCGA-HC-A6AN-01A 2 3 Out-of-frame Intra-chr q22.31 59312 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C9orf150-TYRP1 C9orf150 chr9 12776026 - TYRP1 chr9 12693912 + Exonic hg19 BRCA TCGA-A2-A0SX-01A 2 5 Out-of-frame Intra-chr p23 59313 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C9orf174-NDUFA8 C9orf174 chr9 100075627 - NDUFA8 chr9 124914687 - Exonic hg19 BRCA TCGA-OL-A5DA-01A 4 3 In-Frame Intra-chr q33.2 59314 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C9orf25-C11orf49 C9orf25 chr9 34405863 - C11orf49 chr11 47159196 + Exonic hg19 ACC TCGA-OR-A5JT-01A 6 2 Out-of-frame Inter-chr p11.2 59315 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C9orf25-NLGN1 C9orf25 chr9 34458202 - NLGN1 chr3 173993105 + Exonic hg19 SKCM TCGA-ER-A19S-06A 3 1 Out-of-frame Inter-chr q26.31 59316 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C9orf3-CUEDC1 C9orf3 chr9 97741709 - CUEDC1 chr17 55963240 - Exonic hg19 HNSC TCGA-UP-A6WW-01A 5 2 CDS-5'UTR Inter-chr q22.32 q22 Seq+ 59317 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C9orf3-HIATL1 C9orf3 chr9 97741709 - HIATL1 chr9 97177440 + Exonic hg19 STAD TCGA-VQ-A925-01A 2 3 In-Frame Intra-chr q22.32 Seq+ 59318 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C9orf3-PTPDC1 C9orf3 chr9 97522862 - PTPDC1 chr9 96827016 + Exonic hg19 BRCA TCGA-C8-A12L-01A 2 2 CDS-5'UTR Intra-chr q22.32 q22.32 Seq+ 59319 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C9orf3-TBC1D9 C9orf3 chr9 97489033 - TBC1D9 chr4 141622768 - Exonic hg19 SKCM TCGA-Z2-A8RT-06A 3 4 5'UTR-CDS Inter-chr q22.32 q31.21 Seq+ 59320 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C9orf3-WDR53 C9orf3 chr9 97767898 - WDR53 chr3 196281678 - Exonic hg19 LUSC TCGA-77-8145-01A 80 47 In-Frame Inter-chr q22.32 q29 Seq+ 59321 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C9orf3-ZNF462 C9orf3 chr9 97823092 - ZNF462 chr9 109685635 + Exonic hg19 SARC TCGA-3B-A9HV-01A 13 5 CDS-5'UTR Intra-chr q22.32 q31.2 Transcription factor Seq+ 59322 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C9orf41-KIF21A C9orf41 chr9 77642928 - KIF21A chr12 39764063 - Exonic hg19 SARC TCGA-DX-A6BE-01A 2 2 In-Frame Inter-chr q12 59323 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C9orf46-GLIS3 C9orf46 chr9 5431897 - GLIS3 chr9 3898835 - Exonic hg19 STAD TCGA-CD-A48A-01A 2 3 Out-of-frame Intra-chr p24.2 Transcription factor 59324 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C9orf46-JAK2 C9orf46 chr9 5431897 - JAK2 chr9 5123004 + Exonic hg19 CESC TCGA-PN-A8MA-01A 204 198 Out-of-frame Intra-chr p24.1 TK:JakA Oncogene 59325 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C9orf5-C9orf4 C9orf5 chr9 111868788 - C9orf4 chr9 111912000 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 27 23 Out-of-frame Intra-chr 59326 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C9orf80-SNX30 C9orf80 chr9 115478741 - SNX30 chr9 115567056 + Exonic hg19 SKCM TCGA-EE-A3J8-06A 2 2 Out-of-frame Intra-chr q32 59327 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C9orf85-C9orf57 C9orf85 chr9 74562028 - C9orf57 chr9 74667351 - Exonic hg19 STAD TCGA-BR-8060-01A 10 60 Out-of-frame Intra-chr q21.13 q21.13 Seq+ 59328 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C9orf86-EDEM2 C9orf86 chr9 139718111 - EDEM2 chr20 33804674 - Exonic hg19 LUAD TCGA-44-3918-01A 5 4 Out-of-frame Inter-chr q11.22 59329 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq C9orf86-TMEM141 C9orf86 chr9 139702778 - TMEM141 chr9 139686703 + Exonic hg19 OV TCGA-13-0913-01A 3 8 In-Frame Intra-chr q34.3 Seq+ 59330 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CA13-E2F5 CA13 chr8 86163166 - E2F5 chr8 86114382 + Exonic hg19 HNSC TCGA-P3-A6T4-01A 3 1 Out-of-frame Intra-chr q21.2 q21.2 Transcription factor 59331 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CA13-RBKS CA13 chr8 86180856 - RBKS chr2 28055644 - Exonic hg19 BRCA TCGA-BH-A0AV-01A 7 4 Out-of-frame Inter-chr q21.2 p23.2 Seq+ 59332 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CA3-MYBL1 CA3 chr8 86356355 - MYBL1 chr8 67479227 - Exonic hg19 BRCA TCGA-AR-A256-01A 2 4 In-Frame Intra-chr q21.2 q13.1 Transcription factor Seq+ 59333 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAB39-GBF1 CAB39 chr2 231577945 - GBF1 chr10 104125154 + Exonic hg19 STAD TCGA-BR-8485-01A 6 21 5'UTR-CDS Inter-chr q37.1 q24.32 Seq+ 59334 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAB39-RHBDD1 CAB39 chr2 231624830 - RHBDD1 chr2 227860147 + Exonic hg19 SARC TCGA-DX-A8BX-01A 40 16 Out-of-frame Intra-chr q37.1 q36.3 Seq+ 59335 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAB39L-FNDC3A CAB39L chr13 49975269 - FNDC3A chr13 49746179 + Exonic hg19 PRAD TCGA-ZG-A9LY-01A 19 8 5'UTR-CDS Intra-chr q14.2 q14.2 Seq+ 59336 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAB39L-SETDB2 CAB39L chr13 49987048 - SETDB2 chr13 50064958 + Exonic hg19 UCEC TCGA-AX-A3FX-01A 9 2 5'UTR-CDS Intra-chr q14.2 q14.2 Transcription factor 59337 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAB39L-USP12 CAB39L chr13 49906083 - USP12 chr13 27649525 - Exonic hg19 PRAD TCGA-HC-7230-01A 2 8 Out-of-frame Intra-chr q14.2 q12.13 Tumor suppressor gene Seq+ 59338 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CABIN1-AP000350.10 CABIN1 chr22 24515665 - AP000350.10 chr22 24224646 + Exonic hg19 UCS TCGA-N8-A4PL-01A 14 4 Out-of-frame Intra-chr 59339 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CABIN1-GRIN2A CABIN1 chr22 24515665 - GRIN2A chr16 9984957 - Exonic hg19 BLCA TCGA-DK-A3IN-01A 5 5 Out-of-frame Inter-chr p13.2 Tumor suppressor gene Seq+ 59340 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CABIN1-POLR2F CABIN1 chr22 24530382 - POLR2F chr22 38352780 + Exonic hg19 SKCM TCGA-GN-A8LN-01A 109 68 Out-of-frame Intra-chr q13.1 Seq+ 59341 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CABIN1-SMARCB1 CABIN1 chr22 24408178 - SMARCB1 chr22 24175759 + Exonic hg19 OV TCGA-13-1405-01A 7 12 5'UTR-CDS Intra-chr q11.23 Oncogene Tumor suppressor gene Seq+ 59342 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CABLES1-FTO CABLES1 chr18 20716571 - FTO chr16 54145674 + Exonic hg19 BRCA TCGA-S3-AA12-01A 153 143 In-Frame Inter-chr q11.2 Tumor suppressor gene q12.2 Seq+ 59343 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CABLES1-RBBP8 CABLES1 chr18 20716571 - RBBP8 chr18 20569184 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 2 3 Out-of-frame Intra-chr q11.2 Tumor suppressor gene q11.2 Tumor suppressor gene Seq+ 59344 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CABLES1-RBBP8 CABLES1 chr18 20716571 - RBBP8 chr18 20548769 + Exonic hg19 BRCA TCGA-A8-A08R-01A 2 2 In-Frame Intra-chr q11.2 Tumor suppressor gene q11.2 Tumor suppressor gene Seq+ 59345 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CABYR-OSBPL1A CABYR chr18 21723377 - OSBPL1A chr18 21819346 - Exonic hg19 BLCA TCGA-K4-A5RH-01A 8 1 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 59346 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACHD1-CLIC4 CACHD1 chr1 64936625 - CLIC4 chr1 25124233 + Exonic hg19 BRCA TCGA-BH-A1FC-01A 10 7 In-Frame Intra-chr p31.3 p36.11 Seq+ 59347 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACHD1-ROR1 CACHD1 chr1 64936625 - ROR1 chr1 64624664 + Exonic hg19 OV TCGA-23-1027-01A 5 4 Out-of-frame Intra-chr p31.3 p31.3 TK:Ror 59348 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACHD1-USP32 CACHD1 chr1 65107652 - USP32 chr17 58422969 - Exonic hg19 SARC TCGA-DX-AB3A-01A 6 4 In-Frame Inter-chr p31.3 q23.2 Seq+ 59349 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNA1A-ZNF44 CACNA1A chr19 13394081 - ZNF44 chr19 12359493 - Exonic hg19 BRCA TCGA-BH-A1FE-01A 6 1 CDS-3'UTR Intra-chr p13.13 p13.2 Transcription factor 59350 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNA1C-CLEC2A CACNA1C chr12 2778201 - CLEC2A chr12 10051575 - Exonic hg19 STAD TCGA-CD-A48C-01A 6 72 Out-of-frame Intra-chr p13.33 p13.31 Seq+ 59351 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNA1C-DDX55 CACNA1C chr12 2711126 - DDX55 chr12 124104511 + Exonic hg19 PRAD TCGA-CH-5766-01A 3 6 Out-of-frame Intra-chr p13.33 q24.31 Seq+ 59352 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNA1C-DERA CACNA1C chr12 2622150 - DERA chr12 16109870 + Exonic hg19 SKCM TCGA-EE-A2MR-06A 34 40 In-Frame Intra-chr p13.33 p12.3 Seq+ 59353 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNA1C-EEA1 CACNA1C chr12 2229596 - EEA1 chr12 93220061 - Exonic hg19 SARC TCGA-DX-A23R-01A 89 53 In-Frame Intra-chr p13.33 q22 Transcription factor Seq+ 59354 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNA1C-PIAS4 CACNA1C chr12 2162777 - PIAS4 chr19 4033098 + Exonic hg19 PCPG TCGA-RW-A68B-01A 3 2 In-Frame Inter-chr p13.33 p13.3 Seq+ 59355 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNA1C-SLC6A15 CACNA1C chr12 2229596 - SLC6A15 chr12 85264449 - Exonic hg19 SARC TCGA-DX-A23R-01A 18 10 In-Frame Intra-chr p13.33 q21.31 Seq+ 59356 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNA1C-TSPAN8 CACNA1C chr12 2229596 - TSPAN8 chr12 71676599 - Exonic hg19 SARC TCGA-DX-A23R-01A 8 6 Out-of-frame Intra-chr p13.33 q21.1 Seq+ 59357 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNA1C-WNT5B CACNA1C chr12 2229596 - WNT5B chr12 1740464 + Exonic hg19 BRCA TCGA-AN-A0FX-01A 20 9 CDS-5'UTR Intra-chr p13.33 p13.33 Seq+ 59358 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNA1C-WWP2 CACNA1C chr12 2229596 - WWP2 chr16 69820899 + Exonic hg19 PRAD TCGA-EJ-A8FO-01A 5 2 CDS-5'UTR Inter-chr p13.33 q22.1 Seq+ 59359 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNA1D-GNL3 CACNA1D chr3 53804579 - GNL3 chr3 52724608 + Exonic hg19 ESCA TCGA-L5-A4OS-01A 4 11 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 59360 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNA1D-PRKCD CACNA1D chr3 53535747 - PRKCD chr3 53217468 + Exonic hg19 BRCA TCGA-GM-A2DD-01A 3 2 In-Frame Intra-chr p21.1 p21.1 Tumor suppressor gene Seq+ 59361 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNA1I-FBXW5 CACNA1I chr22 40078666 - FBXW5 chr9 139835623 - Exonic hg19 BLCA TCGA-XF-AAMY-01A 17 13 Out-of-frame Inter-chr q13.1 q34.3 Seq+ 59362 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNA1I-SYNGR1 CACNA1I chr22 40069087 - SYNGR1 chr22 39777701 + Exonic hg19 BLCA TCGA-2F-A9KT-01A 6 2 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 59363 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNA1I-TAB1 CACNA1I chr22 40058440 - TAB1 chr22 39822708 + Exonic hg19 BRCA TCGA-D8-A1JM-01A 8 8 In-Frame Intra-chr q13.1 q13.1 Seq+ 59364 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNA2D1-NAALADL2 CACNA2D1 chr7 81964451 - NAALADL2 chr3 175455094 + Exonic hg19 HNSC TCGA-CN-4723-01A 11 10 In-Frame Inter-chr q21.11 q26.31 Seq+ 59365 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNA2D1-PTPN12 CACNA2D1 chr7 81964451 - PTPN12 chr7 77200395 + Exonic hg19 SARC TCGA-K1-A6RT-01A 4 2 In-Frame Intra-chr q21.11 q11.23 Tumor suppressor gene 59366 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNA2D2-THRSP CACNA2D2 chr3 50540649 - THRSP chr11 77778705 + Exonic hg19 SKCM TCGA-ER-A19T-01A 10 7 CDS-3'UTR Inter-chr p21.31 q14.1 Seq+ 59367 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNA2D3-FOXP1 CACNA2D3 chr3 54798378 - FOXP1 chr3 71050210 - Exonic hg19 BRCA TCGA-A2-A0CX-01A 12 15 Out-of-frame Intra-chr p21.1 Tumor suppressor gene p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 59368 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNA2D3-IFT74 CACNA2D3 chr3 55021780 - IFT74 chr9 27009018 + Exonic hg19 THCA TCGA-E8-A432-01A 3 1 In-Frame Inter-chr p21.1 Tumor suppressor gene p21.2 Seq+ 59369 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNA2D3-SCAF11 CACNA2D3 chr3 54604131 - SCAF11 chr12 46357971 - Exonic hg19 MESO TCGA-UT-A88E-01B 5 4 CDS-5'UTR Inter-chr p21.1 Tumor suppressor gene q12 Seq+ 59370 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNB1-C11orf30 CACNB1 chr17 37343732 - C11orf30 chr11 76207259 + Exonic hg19 BRCA TCGA-BH-A1EN-01A 32 14 Out-of-frame Inter-chr q12 Seq+ 59371 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNB1-CDC6 CACNB1 chr17 37351137 - CDC6 chr17 38445660 + Exonic hg19 BRCA TCGA-AR-A0TX-01A 2 4 CDS-3'UTR Intra-chr q12 q21.2 Seq+ 59372 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNB1-FBXL20 CACNB1 chr17 37351137 - FBXL20 chr17 37499494 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 3 1 In-Frame Intra-chr q12 q12 59373 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNB1-KRT222 CACNB1 chr17 37347727 - KRT222 chr17 38812882 - Exonic hg19 STAD TCGA-VQ-A92D-01A 7 91 Out-of-frame Intra-chr q12 q21.2 Seq+ 59374 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNB1-KRT40 CACNB1 chr17 37353665 - KRT40 chr17 39137403 - Exonic hg19 LUAD TCGA-97-8175-01A 2 1 In-Frame Intra-chr q12 59375 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNB1-MLLT6 CACNB1 chr17 37339966 - MLLT6 chr17 36878931 + Exonic hg19 BRCA TCGA-AR-A0TX-01A 8 12 Out-of-frame Intra-chr q12 q12 Seq+ 59376 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNB1-TANC2 CACNB1 chr17 37347727 - TANC2 chr17 61151304 + Exonic hg19 BRCA TCGA-UL-AAZ6-01A 23 35 Out-of-frame Intra-chr q12 q23.2 Seq+ 59377 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNG4-C17orf51 CACNG4 chr17 64961247 - C17orf51 chr17 21438799 - Exonic hg19 BRCA TCGA-A2-A0EY-01A 3 1 In-Frame Intra-chr q24.2 p11.2 59378 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNG4-VMP1 CACNG4 chr17 64961247 - VMP1 chr17 57851115 + Exonic hg19 PAAD TCGA-2L-AAQE-01A 25 16 Out-of-frame Intra-chr q24.2 q23.1 Seq+ 59379 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CACNG4-VMP1 CACNG4 chr17 64961247 - VMP1 chr17 57812699 + Exonic hg19 BRCA TCGA-C8-A12M-01A 9 5 In-Frame Intra-chr q24.2 q23.1 Seq+ 59380 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CADM1-ARCN1 CADM1 chr11 115374989 - ARCN1 chr11 118468422 + Exonic hg19 LUAD TCGA-38-4632-01A 12 8 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Seq+ 59381 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CADM1-SORL1 CADM1 chr11 115374989 - SORL1 chr11 121424646 + Exonic hg19 PRAD TCGA-CH-5739-01A 4 4 In-Frame Intra-chr q23.3 Tumor suppressor gene q24.1 Seq+ 59382 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CADM2-FHIT CADM2 chr3 85851346 - FHIT chr3 60522712 - Exonic hg19 BRCA TCGA-C8-A26V-01A 4 3 5'UTR-5'UTR Intra-chr p12.1 Tumor suppressor gene p14.2 Tumor suppressor gene Seq+ 59383 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CADM2-ROBO1 CADM2 chr3 85008819 - ROBO1 chr3 78676719 - Exonic hg19 PRAD TCGA-EJ-7791-01A 5 3 Out-of-frame Intra-chr p12.1 Tumor suppressor gene p12.3 Tumor suppressor gene Seq+ 59384 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CADM2-UBE2E2 CADM2 chr3 85008819 - UBE2E2 chr3 23574045 + Exonic hg19 PRAD TCGA-FC-A4JI-01A 10 13 Out-of-frame Intra-chr p12.1 Tumor suppressor gene p24.3 Seq+ 59385 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CADM4-SMG9 CADM4 chr19 44143879 - SMG9 chr19 44254899 - Exonic hg19 ESCA TCGA-L5-A43M-01A 2 7 CDS-5'UTR Intra-chr q13.31 Tumor suppressor gene q13.31 Seq+ 59386 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CADM4-ZSCAN18 CADM4 chr19 44143879 - ZSCAN18 chr19 58601753 - Exonic hg19 CESC TCGA-IR-A3LH-01A 3 5 In-Frame Intra-chr q13.31 Tumor suppressor gene q13.43 Transcription factor Seq+ 59387 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CADPS-FAM19A1 CADPS chr3 62451042 - FAM19A1 chr3 68466430 + Exonic hg19 SKCM TCGA-D3-A2JG-06A 25 11 Out-of-frame Intra-chr p14.2 p14.1 Seq+ 59388 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CADPS-FHIT CADPS chr3 62860264 - FHIT chr3 59908140 - Exonic hg19 BRCA TCGA-E9-A22E-01A 2 2 In-Frame Intra-chr p14.2 p14.2 Tumor suppressor gene 59389 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CADPS2-DHCR7 CADPS2 chr7 122377009 - DHCR7 chr11 71158780 - Exonic hg19 BRCA TCGA-D8-A1JI-01A 11 6 CDS-5'UTR Inter-chr q31.32 q13.4 Seq+ 59390 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CADPS2-DNAH11 CADPS2 chr7 122033495 - DNAH11 chr7 21654732 + Exonic hg19 PRAD TCGA-EJ-7330-01A 3 5 Out-of-frame Intra-chr q31.32 p15.3 Seq+ 59391 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CADPS2-LMOD2 CADPS2 chr7 122526053 - LMOD2 chr7 123301914 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 17 15 In-Frame Intra-chr q31.32 q31.32 Seq+ 59392 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CADPS2-RPGR CADPS2 chr7 122078395 - RPGR chrX 38150737 - Exonic hg19 CESC TCGA-Q1-A6DW-01A 7 1 In-Frame Inter-chr q31.32 p11.4 Seq+ 59393 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CADPS2-XRCC6BP1 CADPS2 chr7 122526053 - XRCC6BP1 chr12 58345541 + Exonic hg19 SARC TCGA-DX-A6BH-01A 109 76 In-Frame Inter-chr q31.32 Seq+ 59394 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CALCOCO1-FAM19A2 CALCOCO1 chr12 54118871 - FAM19A2 chr12 62261207 - Exonic hg19 SARC TCGA-MB-A8JL-01A 3 1 CDS-5'UTR Intra-chr q13.13 q14.1 59395 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CALCOCO2-WRAP53 CALCOCO2 chr17 46933549 - WRAP53 chr17 7604059 + Exonic hg19 SARC TCGA-WK-A8XS-01A 102 80 In-Frame Intra-chr q21.32 p13.1 Seq+ 59396 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CALD1-AKR1B10 CALD1 chr7 134576424 - AKR1B10 chr7 134215395 + Exonic hg19 SKCM TCGA-EE-A2A6-06A 16 1 Out-of-frame Intra-chr q33 q33 Seq+ 59397 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CALD1-AKR1B15 CALD1 chr7 134528722 - AKR1B15 chr7 134249350 + Exonic hg19 HNSC TCGA-CV-7407-01A 4 1 5'UTR-5'UTR Intra-chr q33 q33 Seq+ 59398 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CALD1-CGN CALD1 chr7 134576424 - CGN chr1 151490982 + Exonic hg19 KIRC TCGA-AS-3777-01A 9 6 CDS-5'UTR Inter-chr q33 q21.3 Seq+ 59399 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CALD1-CGN CALD1 chr7 134576424 - CGN chr1 151490982 + Exonic hg19 LIHC TCGA-DD-A115-01A 28 12 CDS-5'UTR Inter-chr q33 q21.3 Seq+ 59400 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CALD1-EXOC4 CALD1 chr7 134464500 - EXOC4 chr7 133749044 + Exonic hg19 BLCA TCGA-GV-A40E-01A 2 1 5'UTR-CDS Intra-chr q33 q33 Seq+ 59401 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CALD1-LRGUK CALD1 chr7 134464500 - LRGUK chr7 133932308 + Exonic hg19 BRCA TCGA-E9-A244-01A 712 577 5'UTR-CDS Intra-chr q33 q33 Seq+ 59402 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CALD1-SLC41A1 CALD1 chr7 134576424 - SLC41A1 chr1 205780215 - Exonic hg19 SKCM TCGA-FS-A1ZU-06A 56 55 CDS-5'UTR Inter-chr q33 q32.1 Seq+ 59403 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CALD1-THSD4 CALD1 chr7 134655392 - THSD4 chr15 72072881 + Exonic hg19 SARC TCGA-DX-A48L-01A 2 8 Out-of-frame Inter-chr q33 q23 59404 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CALM1-KIF3A CALM1 chr14 90874605 - KIF3A chr5 132035266 - Exonic hg19 LGG TCGA-HT-A616-01A 2 4 Out-of-frame Inter-chr q32.11 q31.1 59405 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CALM1-UTRN CALM1 chr14 90874605 - UTRN chr6 144665237 + Exonic hg19 LGG TCGA-HT-8104-01A 2 1 Out-of-frame Inter-chr q32.11 q24.2 59406 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CALM2-TTC7A CALM2 chr2 47397873 - TTC7A chr2 47233061 + Exonic hg19 SARC TCGA-K1-A3PO-01A 21 10 Out-of-frame Intra-chr p21 p21 Seq+ 59407 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CALML3-ANKS1A CALML3 chr10 5568225 - ANKS1A chr6 34977682 + Exonic hg19 BLCA TCGA-CU-A3KJ-01A 2 135 Out-of-frame Inter-chr p15.1 p21.31 59408 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CALR-BRD2 CALR chr19 13055304 - BRD2 chr6 32944339 + Exonic hg19 PRAD TCGA-KK-A6E5-01A 3 2 3'UTR-CDS Inter-chr p13.13 Atypical:BRD 59409 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CALR-PLEKHB2 CALR chr19 13055304 - PLEKHB2 chr2 131876464 + Exonic hg19 THCA TCGA-DJ-A2Q7-01A 2 1 Out-of-frame Inter-chr p13.13 q21.1 59410 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CALR-TNNT1 CALR chr19 13055304 - TNNT1 chr19 55646910 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 2 12 Out-of-frame Intra-chr p13.13 q13.42 59411 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CALR3-PLCB1 CALR3 chr19 16738683 - PLCB1 chr20 8608941 + Exonic hg19 SARC TCGA-QQ-A5VB-01A 17 6 5'UTR-CDS Inter-chr p13.11 p12.3 59412 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CALR3-ZNF99 CALR3 chr19 16738683 - ZNF99 chr19 22952126 - Exonic hg19 UCEC TCGA-B5-A5OE-01A 21 1 5'UTR-CDS Intra-chr p13.11 p12 Transcription factor 59413 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CALR3-ZSCAN18 CALR3 chr19 16738683 - ZSCAN18 chr19 58601753 - Exonic hg19 STAD TCGA-VQ-A8PQ-01A 3 10 5'UTR-5'UTR Intra-chr p13.11 q13.43 Transcription factor 59414 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMK1D-C10orf47 CAMK1D chr10 12391909 - C10orf47 chr10 11893996 + Exonic hg19 BRCA TCGA-D8-A1JK-01A 6 3 CDS-5'UTR Intra-chr p13 59415 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMK1D-FAM188A CAMK1D chr10 12708809 - FAM188A chr10 15824225 - Exonic hg19 BRCA TCGA-OL-A6VO-01A 15 3 Out-of-frame Intra-chr p13 Tumor suppressor gene Seq+ 59416 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMK1D-TSPAN18 CAMK1D chr10 12856306 - TSPAN18 chr11 44785976 + Exonic hg19 BRCA TCGA-A8-A09D-01A 11 5 CDS-5'UTR Inter-chr p13 p11.2 Seq+ 59417 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMK2B-KIAA0146 CAMK2B chr7 44364956 - KIAA0146 chr8 48308936 + Exonic hg19 LUAD TCGA-69-7760-01A 18 3 Out-of-frame Inter-chr p13 Seq+ 59418 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMK2D-ANK2 CAMK2D chr4 114430794 - ANK2 chr4 114302613 + Exonic hg19 LUSC TCGA-98-A53A-01A 8 4 In-Frame Intra-chr q26 q25 Seq+ 59419 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMK2D-ANK2 CAMK2D chr4 114436225 - ANK2 chr4 114179206 + Exonic hg19 LGG TCGA-DU-5855-01A 27 10 In-Frame Intra-chr q26 q25 Seq+ 59420 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMK2D-STAC3 CAMK2D chr4 114386685 - STAC3 chr12 57638994 - Exonic hg19 UCEC TCGA-KP-A3W4-01A 2 2 Out-of-frame Inter-chr q26 q13.3 Seq+ 59421 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMK2D-TLL2 CAMK2D chr4 114421619 - TLL2 chr10 98192719 - Exonic hg19 READ TCGA-F5-6864-01A 12 8 In-Frame Inter-chr q26 q24.1 Seq+ 59422 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMK2G-C10orf55 CAMK2G chr10 75601927 - C10orf55 chr10 75676399 - Exonic hg19 LIHC TCGA-2Y-A9H0-01A 9 9 CDS-5'UTR Intra-chr q22.2 q22.2 Seq+ 59423 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMK2G-C10orf55 CAMK2G chr10 75620588 - C10orf55 chr10 75676399 - Exonic hg19 CESC TCGA-C5-A1BN-01B 7 1 CDS-5'UTR Intra-chr q22.2 q22.2 Seq+ 59424 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMKK2-ANAPC5 CAMKK2 chr12 121734441 - ANAPC5 chr12 121758262 - Exonic hg19 LIHC TCGA-BC-A10Y-01A 22 30 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 59425 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMKK2-DIP2B CAMKK2 chr12 121734441 - DIP2B chr12 51019759 + Exonic hg19 SARC TCGA-DX-A1KW-01A 42 57 5'UTR-CDS Intra-chr q24.31 q13.12 Seq+ 59426 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMKK2-HPD CAMKK2 chr12 121734441 - HPD chr12 122277954 - Exonic hg19 LIHC TCGA-FV-A495-01A 21 76 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 59427 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMKK2-KDM2B CAMKK2 chr12 121734441 - KDM2B chr12 121868272 - Exonic hg19 UCEC TCGA-B5-A3S1-01A 2 7 5'UTR-CDS Intra-chr q24.31 q24.31 Transcription factor Seq+ 59428 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMKK2-KDM2B CAMKK2 chr12 121707331 - KDM2B chr12 121932468 - Exonic hg19 PRAD TCGA-EJ-A46B-01A 3 3 In-Frame Intra-chr q24.31 q24.31 Transcription factor Seq+ 59429 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMKK2-KDM2B CAMKK2 chr12 121708701 - KDM2B chr12 121891147 - Exonic hg19 PRAD TCGA-EJ-A65J-01A 43 12 In-Frame Intra-chr q24.31 q24.31 Transcription factor Seq+ 59430 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMKK2-KDM2B CAMKK2 chr12 121675497 - KDM2B chr12 121954666 - Exonic hg19 PRAD TCGA-G9-6333-01A 7 3 Out-of-frame Intra-chr q24.31 q24.31 Transcription factor Seq+ 59431 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMKK2-NR2C1 CAMKK2 chr12 121682943 - NR2C1 chr12 95461167 - Exonic hg19 GBM TCGA-06-0129-01A 3 16 CDS-5'UTR Intra-chr q24.31 q22 Transcription factor Seq+ 59432 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMSAP1-C9orf86 CAMSAP1 chr9 138798846 - C9orf86 chr9 139717977 + Exonic hg19 BLCA TCGA-XF-AAMX-01A 24 20 In-Frame Intra-chr q34.3 Seq+ 59433 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMSAP1-KCNT1 CAMSAP1 chr9 138758302 - KCNT1 chr9 138656877 + Exonic hg19 OV TCGA-24-1553-01A 2 4 In-Frame Intra-chr q34.3 q34.3 Seq+ 59434 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMSAP1-LCN8 CAMSAP1 chr9 138773479 - LCN8 chr9 139651620 - Exonic hg19 SARC TCGA-DX-A3LS-01A 4 7 In-Frame Intra-chr q34.3 q34.3 Seq+ 59435 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMSAP1-SDCCAG3 CAMSAP1 chr9 138798846 - SDCCAG3 chr9 139302390 - Exonic hg19 HNSC TCGA-D6-8569-01A 15 5 In-Frame Intra-chr q34.3 q34.3 Seq+ 59436 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMSAP1-STAU2 CAMSAP1 chr9 138798846 - STAU2 chr8 74529686 - Exonic hg19 SARC TCGA-3B-A9HL-01A 2 1 Out-of-frame Inter-chr q34.3 q21.11 Seq+ 59437 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMSAP1-UBAC1 CAMSAP1 chr9 138798846 - UBAC1 chr9 138845599 - Exonic hg19 LUSC TCGA-NC-A5HM-01A 29 17 In-Frame Intra-chr q34.3 q34.3 Seq+ 59438 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMSAP1L1-BCAR3 CAMSAP1L1 chr1 200784772 - BCAR3 chr1 94171698 - Exonic hg19 BRCA TCGA-AC-A2BK-01A 2 2 Out-of-frame Intra-chr p22.1 59439 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMSAP1L1-CARS CAMSAP1L1 chr1 200824017 - CARS chr11 3022478 - Exonic hg19 LUSC TCGA-43-8115-01A 16 9 Out-of-frame Inter-chr 59440 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMSAP1L1-DHRS3 CAMSAP1L1 chr1 200730226 - DHRS3 chr1 12640694 - Exonic hg19 LIHC TCGA-CC-5258-01A 33 16 Out-of-frame Intra-chr p36.21 59441 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMTA1-DHRS3 CAMTA1 chr1 6845635 - DHRS3 chr1 12640694 - Exonic hg19 LUSC TCGA-46-3769-01A 19 42 In-Frame Intra-chr p36.31 Tumor suppressor gene Transcription factor p36.21 Seq+ 59442 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMTA1-THAP3 CAMTA1 chr1 6845635 - THAP3 chr1 6688559 + Exonic hg19 BRCA TCGA-D8-A1JK-01A 2 3 Out-of-frame Intra-chr p36.31 Tumor suppressor gene Transcription factor p36.31 Transcription factor Seq+ 59443 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAMTA2-LCK CAMTA2 chr17 4890888 - LCK chr1 32745272 + Exonic hg19 READ TCGA-AG-3731-01A 8 15 In-Frame Inter-chr p13.2 Transcription factor p35.2 TK:Src Oncogene Seq+ 59444 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAND1-IL22 CAND1 chr12 67686556 - IL22 chr12 68642656 - Exonic hg19 SARC TCGA-DX-A7ES-01A 121 128 Out-of-frame Intra-chr q14.3 q15 Seq+ 59445 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAND1-TUSC5 CAND1 chr12 67675833 - TUSC5 chr17 1198785 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 12 20 Out-of-frame Inter-chr q14.3 p13.3 Seq+ 59446 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CANT1-FBXL20 CANT1 chr17 77005746 - FBXL20 chr17 37459892 - Exonic hg19 BRCA TCGA-C8-A12M-01A 4 7 5'UTR-CDS Intra-chr q25.3 q12 Seq+ 59447 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CANT1-PPP3CA CANT1 chr17 76987799 - PPP3CA chr4 102269435 - Exonic hg19 PRAD TCGA-VN-A88L-01A 2 7 Out-of-frame Inter-chr q25.3 q24 59448 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CANT1-PSMD3 CANT1 chr17 77005746 - PSMD3 chr17 38140547 + Exonic hg19 BRCA TCGA-C8-A135-01A 61 40 5'UTR-CDS Intra-chr q25.3 q21.1 Seq+ 59449 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CANX-IL1R2 CANX chr5 179157926 - IL1R2 chr2 102638649 + Exonic hg19 HNSC TCGA-CV-5443-01A 2 16 3'UTR-CDS Inter-chr q11.2 59450 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CANX-PLAT CANX chr5 179157926 - PLAT chr8 42051245 - Exonic hg19 KIRC TCGA-AK-3444-01A 2 32 Out-of-frame Inter-chr p11.21 59451 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAP1-MACF1 CAP1 chr1 40506473 - MACF1 chr1 39934287 + Exonic hg19 SKCM TCGA-FS-A1ZC-06A 3 16 5'UTR-CDS Intra-chr p34.2 p34.3 Seq+ 59452 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPN1-EIF2AK2 CAPN1 chr11 64979476 - EIF2AK2 chr2 37342384 - Exonic hg19 LUSC TCGA-66-2737-01A 2 2 Out-of-frame Inter-chr q13.1 p22.2 59453 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPN1-GTF2IRD1 CAPN1 chr11 64973192 - GTF2IRD1 chr7 73927160 + Exonic hg19 ESCA TCGA-L5-A4OQ-01A 2 42 In-Frame Inter-chr q13.1 q11.23 Transcription factor 59454 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPN1-SPDYC CAPN1 chr11 64953809 - SPDYC chr11 64939717 + Exonic hg19 LIHC TCGA-BC-A10Y-01A 32 8 In-Frame Intra-chr q13.1 q13.1 Seq+ 59455 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPN1-SUPT16H CAPN1 chr11 64979476 - SUPT16H chr14 21829491 - Exonic hg19 BLCA TCGA-G2-A3VY-01A 2 12 Out-of-frame Inter-chr q13.1 q11.2 59456 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPN13-GALNT14 CAPN13 chr2 31009994 - GALNT14 chr2 31155060 - Exonic hg19 LUAD TCGA-49-4514-01A 10 4 Out-of-frame Intra-chr p23.1 p23.1 Seq+ 59457 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPN13-GALNT14 CAPN13 chr2 30980912 - GALNT14 chr2 31147689 - Exonic hg19 LUSC TCGA-NC-A5HJ-01A 50 40 In-Frame Intra-chr p23.1 p23.1 Seq+ 59458 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPN2-SMARCA1 CAPN2 chr1 223963545 - SMARCA1 chrX 128652424 - Exonic hg19 PRAD TCGA-CH-5761-01A 2 1 3'UTR-CDS Inter-chr q41 q26.1 59459 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPN5-EPB41L1 CAPN5 chr11 76837196 - EPB41L1 chr20 34818077 + Exonic hg19 LIHC TCGA-FV-A3R2-01A 2 1 Out-of-frame Inter-chr q13.5 q11.23 59460 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPN5-HSD17B14 CAPN5 chr11 76804859 - HSD17B14 chr19 49318398 - Exonic hg19 LIHC TCGA-DD-AAE2-01A 169 121 In-Frame Inter-chr q13.5 q13.33 Seq+ 59461 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPN5-PELI3 CAPN5 chr11 76804859 - PELI3 chr11 66239840 + Exonic hg19 LUAD TCGA-55-A492-01A 3 1 In-Frame Intra-chr q13.5 q13.2 Seq+ 59462 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPN5-XRRA1 CAPN5 chr11 76804859 - XRRA1 chr11 74554498 - Exonic hg19 SKCM TCGA-YG-AA3P-06A 2 1 Out-of-frame Intra-chr q13.5 q13.4 59463 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPN6-DCX CAPN6 chrX 110490596 - DCX chrX 110544971 - Exonic hg19 BRCA TCGA-E2-A14N-01A 19 11 In-Frame Intra-chr q23 q23 Seq+ 59464 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPNS1-ARHGEF26 CAPNS1 chr19 36641254 - ARHGEF26 chr3 153842199 + Exonic hg19 PRAD TCGA-G9-6371-01A 2 1 3'UTR-CDS Inter-chr q13.12 59465 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPNS1-CCDC149 CAPNS1 chr19 36641254 - CCDC149 chr4 24981770 - Exonic hg19 PRAD TCGA-H9-A6BY-01A 2 1 Out-of-frame Inter-chr q13.12 p15.2 59466 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPNS1-CHD1 CAPNS1 chr19 36641254 - CHD1 chr5 98219587 - Exonic hg19 LUAD TCGA-55-6978-01A 2 18 Out-of-frame Inter-chr q13.12 q21.1 Tumor suppressor gene 59467 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPNS1-MTA2 CAPNS1 chr19 36641254 - MTA2 chr11 62363809 - Exonic hg19 PRAD TCGA-EJ-5506-01A 2 6 3'UTR-CDS Inter-chr q13.12 q12.3 59468 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPRIN1-C11orf84 CAPRIN1 chr11 34113603 - C11orf84 chr11 63585277 + Exonic hg19 LGG TCGA-DU-A7T6-01A 18 12 In-Frame Intra-chr p13 q13.1 Seq+ 59469 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPRIN1-CD151 CAPRIN1 chr11 34112225 - CD151 chr11 838133 + Exonic hg19 ACC TCGA-OR-A5J8-01A 50 12 In-Frame Intra-chr p13 p15.5 Seq+ 59470 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPRIN1-COMMD9 CAPRIN1 chr11 34104588 - COMMD9 chr11 36297790 - Exonic hg19 BRCA TCGA-BH-A0E2-01A 17 18 Out-of-frame Intra-chr p13 p13 Seq+ 59471 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPRIN1-TRIM44 CAPRIN1 chr11 34074183 - TRIM44 chr11 35827908 + Exonic hg19 LUAD TCGA-J2-A4AD-01A 2 5 Out-of-frame Intra-chr p13 p13 Seq+ 59472 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPRIN2-AMN1 CAPRIN2 chr12 30869442 - AMN1 chr12 31867885 - Exonic hg19 BRCA TCGA-D8-A13Y-01A 10 3 3'UTR-3'UTR Intra-chr p11.21 p11.21 Seq+ 59473 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPRIN2-R3HDM2 CAPRIN2 chr12 30893954 - R3HDM2 chr12 57697000 - Exonic hg19 SKCM TCGA-D3-A3CC-06A 23 4 In-Frame Intra-chr p11.21 q13.3 Seq+ 59474 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPZA1-MIER1 CAPZA1 chr1 113189895 - MIER1 chr1 67442278 + Exonic hg19 CESC TCGA-DS-A1OC-01A 4 1 Out-of-frame Intra-chr p13.2 p31.3 59475 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPZA2-ABCB1 CAPZA2 chr7 116451156 - ABCB1 chr7 87168661 - Exonic hg19 LIHC TCGA-DD-A73F-01A 6 5 5'UTR-CDS Intra-chr q31.2 q21.12 Seq+ 59476 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPZA2-C3orf26 CAPZA2 chr7 116528244 - C3orf26 chr3 99865817 + Exonic hg19 PRAD TCGA-FC-A4JI-01A 2 3 In-Frame Inter-chr q31.2 Seq+ 59477 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPZA2-MET CAPZA2 chr7 116528244 - MET chr7 116414935 + Exonic hg19 LUAD TCGA-78-7220-01A 45 18 In-Frame Intra-chr q31.2 q31.2 TK:Met Oncogene KB Pub Seq+ 59478 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPZA2-MET CAPZA2 chr7 116550365 - MET chr7 116409699 + Exonic hg19 BRCA TCGA-AR-A1AN-01A 24 7 In-Frame Intra-chr q31.2 q31.2 TK:Met Oncogene KB Pub Seq+ 59479 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPZA2-MET CAPZA2 chr7 116528244 - MET chr7 116395409 + Exonic hg19 KIRP TCGA-G7-6793-01A 53 21 Out-of-frame Intra-chr q31.2 q31.2 TK:Met Oncogene KB Pub Seq+ 59480 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPZA2-STYXL1 CAPZA2 chr7 116528244 - STYXL1 chr7 75658021 - Exonic hg19 ESCA TCGA-L5-A4OU-01A 6 13 In-Frame Intra-chr q31.2 q11.23 Seq+ 59481 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPZB-APITD1 CAPZB chr1 19811930 - APITD1 chr1 10500404 + Exonic hg19 UCEC TCGA-B5-A0JN-01A 14 8 Out-of-frame Intra-chr p36.13 Tumor suppressor gene Seq+ 59482 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPZB-CFL1 CAPZB chr1 19665273 - CFL1 chr11 65629059 - Exonic hg19 PRAD TCGA-HC-8265-01A 3 2 Out-of-frame Inter-chr p36.13 q13.1 59483 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPZB-SCEL CAPZB chr1 19670852 - SCEL chr13 78208514 + Exonic hg19 BRCA TCGA-E2-A573-01A 72 36 In-Frame Inter-chr p36.13 q22.3 Seq+ 59484 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAPZB-TMCO4 CAPZB chr1 19811930 - TMCO4 chr1 20027378 - Exonic hg19 UCS TCGA-N7-A4Y8-01A 12 10 Out-of-frame Intra-chr p36.13 p36.13 Seq+ 59485 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CARD10-LGALS2 CARD10 chr22 37911980 - LGALS2 chr22 37967938 - Exonic hg19 LIHC TCGA-BC-A217-01A 67 83 In-Frame Intra-chr q13.1 q13.1 Seq+ 59486 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CARD11-AC091801.1 CARD11 chr7 3083301 - AC091801.1 chr7 3197888 - Exonic hg19 BLCA TCGA-4Z-AA87-01A 2 1 Out-of-frame Intra-chr p22.2 Oncogene 59487 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CARD11-ZNRD1 CARD11 chr7 3083301 - ZNRD1 chr6 30029292 + Exonic hg19 COAD TCGA-DM-A28F-01A 4 1 5'UTR-5'UTR Inter-chr p22.2 Oncogene Seq+ 59488 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CARD8-BCKDHA CARD8 chr19 48744219 - BCKDHA chr19 41916542 + Exonic hg19 BRCA TCGA-A8-A097-01A 25 11 Out-of-frame Intra-chr q13.33 q13.2 Seq+ 59489 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CARKD-MYO16 CARKD chr13 111267994 - MYO16 chr13 109610036 + Exonic hg19 UCS TCGA-N5-A4RD-01A 3 3 In-Frame Intra-chr 59490 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CARM1-C19orf38 CARM1 chr19 10982598 - C19orf38 chr19 10973846 + Exonic hg19 OV TCGA-24-1548-01A 36 13 In-Frame Intra-chr p13.2 p13.2 Seq+ 59491 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CARM1-C19orf38 CARM1 chr19 10982598 - C19orf38 chr19 10960935 + Exonic hg19 LUSC TCGA-66-2737-01A 4 1 In-Frame Intra-chr p13.2 p13.2 Seq+ 59492 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CARM1-C19orf38 CARM1 chr19 10982598 - C19orf38 chr19 10979894 + Exonic hg19 ACC TCGA-OR-A5K5-01A 26 40 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 59493 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CARM1-CASP14 CARM1 chr19 11027173 - CASP14 chr19 15163017 + Exonic hg19 PRAD TCGA-KK-A6DY-01A 2 2 CDS-5'UTR Intra-chr p13.2 p13.12 Seq+ 59494 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CARM1-KLF11 CARM1 chr19 10982598 - KLF11 chr2 10187777 + Exonic hg19 COAD TCGA-CM-6167-01A 2 2 Out-of-frame Inter-chr p13.2 p25.1 Transcription factor Seq+ 59495 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CARM1-OLFM2 CARM1 chr19 10982598 - OLFM2 chr19 9971470 - Exonic hg19 LUSC TCGA-43-6771-01A 2 3 Out-of-frame Intra-chr p13.2 p13.2 59496 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CARM1-PLA2G4C CARM1 chr19 10982598 - PLA2G4C chr19 48558306 - Exonic hg19 ESCA TCGA-L5-A891-01A 16 11 Out-of-frame Intra-chr p13.2 q13.33 Seq+ 59497 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CARS-OSBPL5 CARS chr11 3059280 - OSBPL5 chr11 3115564 - Exonic hg19 LUSC TCGA-43-2578-01A 10 6 Out-of-frame Intra-chr p15.4 Seq+ 59498 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CARS-TSHZ3 CARS chr11 3078573 - TSHZ3 chr19 31770658 - Exonic hg19 SARC TCGA-DX-A3LT-01A 2 1 In-Frame Inter-chr q12 Transcription factor 59499 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASC1-PLEKHA5 CASC1 chr12 25348010 - PLEKHA5 chr12 19406874 + Exonic hg19 LUAD TCGA-86-7954-01A 2 2 Out-of-frame Intra-chr p12.1 Tumor suppressor gene p12.3 Seq+ 59500 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASC3-CDK12 CASC3 chr17 38297860 - CDK12 chr17 37686884 + Exonic hg19 STAD TCGA-BR-4366-01A 10 9 Out-of-frame Intra-chr q21.1 q12 Oncogene Seq+ 59501 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASC3-ERBB2 CASC3 chr17 38297860 - ERBB2 chr17 37844949 + Exonic hg19 LUSC TCGA-L3-A524-01A 4 3 CDS-5'UTR Intra-chr q21.1 q12 Oncogene Seq+ 59502 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASC3-HNF1B CASC3 chr17 38297860 - HNF1B chr17 36047395 - Exonic hg19 SARC TCGA-DX-A3M1-01A 23 9 In-Frame Intra-chr q21.1 q12 Transcription factor Seq+ 59503 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASC3-MED1 CASC3 chr17 38297860 - MED1 chr17 37584043 - Exonic hg19 BRCA TCGA-E9-A228-01A 20 8 Out-of-frame Intra-chr q21.1 q12 Tumor suppressor gene Seq+ 59504 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASC3-SIPA1L3 CASC3 chr17 38297860 - SIPA1L3 chr19 38696737 + Exonic hg19 BLCA TCGA-E7-A5KE-01A 23 4 In-Frame Inter-chr q21.1 q13.13 Seq+ 59505 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASC3-THRA CASC3 chr17 38324670 - THRA chr17 38249273 + Exonic hg19 CHOL TCGA-ZH-A8Y4-01A 45 12 In-Frame Intra-chr q21.1 q21.1 Tumor suppressor gene Transcription factor Seq+ 59506 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASC3-ZNF254 CASC3 chr17 38297860 - ZNF254 chr19 24309056 + Exonic hg19 BRCA TCGA-A2-A1G1-01A 11 11 Out-of-frame Inter-chr q21.1 p12 Transcription factor Seq+ 59507 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASC4-LRRC8D CASC4 chr15 44630515 - LRRC8D chr1 90398626 + Exonic hg19 SARC TCGA-X6-A8C6-01A 9 9 CDS-5'UTR Inter-chr q15.3 p22.2 Seq+ 59508 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASC4-TGM5 CASC4 chr15 44630515 - TGM5 chr15 43533188 - Exonic hg19 BRCA TCGA-BH-A0E6-01A 7 7 In-Frame Intra-chr q15.3 q15.2 Seq+ 59509 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASC5-LIPC CASC5 chr15 40886590 - LIPC chr15 58855704 + Exonic hg19 CESC TCGA-IR-A3LK-01A 344 35 5'UTR-CDS Intra-chr q15.1 Oncogene q21.3 Seq+ 59510 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASD1-VWC2 CASD1 chr7 94147635 - VWC2 chr7 49951630 + Exonic hg19 GBM TCGA-06-2557-01A 8 43 Out-of-frame Intra-chr q21.3 p12.2 Seq+ 59511 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASK-C6orf70 CASK chrX 41712368 - C6orf70 chr6 170168199 + Exonic hg19 PRAD TCGA-ZG-A9L1-01A 14 4 Out-of-frame Inter-chr p11.4 CAMK:CASK 59512 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASK-EYA2 CASK chrX 41598637 - EYA2 chr20 45618640 + Exonic hg19 BRCA TCGA-A8-A08L-01A 3 2 CDS-5'UTR Inter-chr p11.4 CAMK:CASK q13.12 Seq+ 59513 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASK-GLIPR1L1 CASK chrX 41782183 - GLIPR1L1 chr12 75737473 + Exonic hg19 BRCA TCGA-E2-A14T-01A 12 2 Out-of-frame Inter-chr p11.4 CAMK:CASK q21.2 Seq+ 59514 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASKIN2-QRICH2 CASKIN2 chr17 73509792 - QRICH2 chr17 74286158 - Exonic hg19 KIRC TCGA-BP-4983-01A 3 1 In-Frame Intra-chr q25.1 q25.1 59515 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASP10-CFLAR CASP10 chr2 202070696 - CFLAR chr2 201994452 + Exonic hg19 LUAD TCGA-71-8520-01A 2 2 CDS-5'UTR Intra-chr q33.1 q33.1 Seq+ 59516 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASP7-C10orf137 CASP7 chr10 115457362 - C10orf137 chr10 127426487 + Exonic hg19 LUAD TCGA-93-A4JQ-01A 6 3 Out-of-frame Intra-chr q25.3 59517 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASP7-LRRC27 CASP7 chr10 115439737 - LRRC27 chr10 134165111 + Exonic hg19 PRAD TCGA-TP-A8TT-01A 18 28 5'UTR-5'UTR Intra-chr q25.3 q26.3 Seq+ 59518 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASP8-ALS2CR12 CASP8 chr2 202131514 - ALS2CR12 chr2 202195556 - Exonic hg19 BRCA TCGA-BH-A18T-01A 8 10 In-Frame Intra-chr q33.1 Oncogene Tumor suppressor gene q33.1 Seq+ 59519 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASP8-CFLAR CASP8 chr2 202098835 - CFLAR chr2 201994452 + Exonic hg19 STAD TCGA-BR-8361-01A 2 7 5'UTR-5'UTR Intra-chr q33.1 Oncogene Tumor suppressor gene q33.1 Seq+ 59520 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASP8-CFLAR CASP8 chr2 202098835 - CFLAR chr2 201994452 + Exonic hg19 SKCM TCGA-WE-A8K4-01A 117 58 5'UTR-5'UTR Intra-chr q33.1 Oncogene Tumor suppressor gene q33.1 Seq+ 59521 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASP8-NRP2 CASP8 chr2 202098835 - NRP2 chr2 206547815 + Exonic hg19 PRAD TCGA-CH-5792-01A 11 9 Out-of-frame Intra-chr q33.1 Oncogene Tumor suppressor gene q33.3 Seq+ 59522 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASP8-UBR3 CASP8 chr2 202131514 - UBR3 chr2 170789422 + Exonic hg19 LUAD TCGA-44-2665-01A 3 1 Out-of-frame Intra-chr q33.1 Oncogene Tumor suppressor gene q31.1 59523 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASP8-VMP1 CASP8 chr2 202150040 - VMP1 chr17 57915656 + Exonic hg19 UCEC TCGA-EO-A3KW-01A 70 21 In-Frame Inter-chr q33.1 Oncogene Tumor suppressor gene q23.1 Seq+ 59524 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAST-CDHR3 CAST chr5 96108937 - CDHR3 chr7 105668108 + Exonic hg19 LUAD TCGA-75-7025-01A 2 1 Out-of-frame Inter-chr q15 q22.3 59525 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAST-FAM172A CAST chr5 96031611 - FAM172A chr5 93300228 - Exonic hg19 BRCA TCGA-A2-A0SV-01A 11 11 In-Frame Intra-chr q15 q15 Tumor suppressor gene Seq+ 59526 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASZ1-AGTRAP CASZ1 chr1 10725140 - AGTRAP chr1 11805860 + Exonic hg19 LGG TCGA-DB-A64O-01A 2 2 Out-of-frame Intra-chr p36.22 Transcription factor p36.22 59527 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASZ1-ALG14 CASZ1 chr1 10753931 - ALG14 chr1 95530573 - Exonic hg19 UCEC TCGA-AX-A3G4-01A 3 3 In-Frame Intra-chr p36.22 Transcription factor p21.3 59528 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASZ1-EXOSC10 CASZ1 chr1 10856621 - EXOSC10 chr1 11131030 - Exonic hg19 UCEC TCGA-AX-A3G6-01A 25 185 5'UTR-CDS Intra-chr p36.22 Transcription factor p36.22 Seq+ 59529 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASZ1-MASP2 CASZ1 chr1 10856621 - MASP2 chr1 11090939 - Exonic hg19 STAD TCGA-CG-4449-01A 8 16 5'UTR-CDS Intra-chr p36.22 Transcription factor p36.22 KB Pub Seq+ 59530 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASZ1-MTOR CASZ1 chr1 10765549 - MTOR chr1 11288975 - Exonic hg19 STAD TCGA-BR-8590-01A 12 26 5'UTR-CDS Intra-chr p36.22 Transcription factor p36.22 Oncogene Seq+ 59531 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASZ1-PRKD2 CASZ1 chr1 10710749 - PRKD2 chr19 47185005 - Exonic hg19 PRAD TCGA-J4-A67S-01A 8 5 In-Frame Inter-chr p36.22 Transcription factor q13.32 Seq+ 59532 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASZ1-SLC9A1 CASZ1 chr1 10753931 - SLC9A1 chr1 27440777 - Exonic hg19 PAAD TCGA-3A-A9J0-01A 31 25 In-Frame Intra-chr p36.22 Transcription factor p36.11 Seq+ 59533 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CASZ1-SPSB1 CASZ1 chr1 10820758 - SPSB1 chr1 9415802 + Exonic hg19 STAD TCGA-BR-4367-01A 2 4 5'UTR-5'UTR Intra-chr p36.22 Transcription factor p36.22 59534 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAT-CD3D CAT chr11 34460626 - CD3D chr11 118210209 - Exonic hg19 OV TCGA-13-0905-01B 22 16 Out-of-frame Intra-chr p13 Tumor suppressor gene q23.3 Seq+ 59535 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CAT-TRIM44 CAT chr11 34482936 - TRIM44 chr11 35827908 + Exonic hg19 SKCM TCGA-W3-A828-06A 26 13 Out-of-frame Intra-chr p13 Tumor suppressor gene p13 Seq+ 59536 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CATSPERB-ATXN3 CATSPERB chr14 92159470 - ATXN3 chr14 92563182 - Exonic hg19 PAAD TCGA-IB-7654-01A 14 13 In-Frame Intra-chr q32.12 Seq+ 59537 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CATSPERB-ATXN3 CATSPERB chr14 92246920 - ATXN3 chr14 92563182 - Exonic hg19 BRCA TCGA-JL-A3YW-01A 7 4 5'UTR-CDS Intra-chr q32.12 Seq+ 59538 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CATSPERB-FBLN5 CATSPERB chr14 92174485 - FBLN5 chr14 92361416 - Exonic hg19 BRCA TCGA-EW-A1P1-01A 2 3 In-Frame Intra-chr q32.12 59539 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CATSPERB-TC2N CATSPERB chr14 92185762 - TC2N chr14 92268765 - Exonic hg19 LUAD TCGA-44-5645-01A 2 1 In-Frame Intra-chr 59540 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CATSPERB-TC2N CATSPERB chr14 92246920 - TC2N chr14 92280169 - Exonic hg19 BRCA TCGA-A7-A13G-01A 4 6 5'UTR-5'UTR Intra-chr 59541 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CATSPERB-TC2N CATSPERB chr14 92246920 - TC2N chr14 92280169 - Exonic hg19 BRCA TCGA-AC-A3QQ-01A 2 4 5'UTR-5'UTR Intra-chr 59542 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CATSPERB-TRIP11 CATSPERB chr14 92246920 - TRIP11 chr14 92442533 - Exonic hg19 LUAD TCGA-55-6987-01A 6 8 5'UTR-CDS Intra-chr q32.12 Oncogene Seq+ 59543 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CATSPERB-TRIP11 CATSPERB chr14 92126181 - TRIP11 chr14 92439205 - Exonic hg19 BRCA TCGA-BH-A0EE-01A 29 23 Out-of-frame Intra-chr q32.12 Oncogene Seq+ 59544 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CATSPERG-RASSF1 CATSPERG chr19 38828144 - RASSF1 chr3 50369585 - Exonic hg19 MESO TCGA-SH-A7BD-01A 6 3 In-Frame Inter-chr q13.2 p21.31 Tumor suppressor gene Seq+ 59545 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBFA2T2-BCL2L1 CBFA2T2 chr20 32078107 - BCL2L1 chr20 30253889 - Exonic hg19 SARC TCGA-DX-A8BS-01A 8 15 Out-of-frame Intra-chr q11.21 q11.21 Oncogene Seq+ 59546 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBFA2T2-DOK5 CBFA2T2 chr20 32078107 - DOK5 chr20 53259997 + Exonic hg19 LUAD TCGA-MP-A4SV-01A 4 14 Out-of-frame Intra-chr q11.21 q13.2 Seq+ 59547 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBFA2T2-HM13 CBFA2T2 chr20 32078107 - HM13 chr20 30132750 + Exonic hg19 HNSC TCGA-CN-6024-01A 10 18 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 59548 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBFA2T2-REM1 CBFA2T2 chr20 32078107 - REM1 chr20 30064030 + Exonic hg19 HNSC TCGA-CN-A6UY-01A 4 4 5'UTR-5'UTR Intra-chr q11.21 q11.21 Seq+ 59549 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBFA2T2-SNTA1 CBFA2T2 chr20 32078107 - SNTA1 chr20 32026832 - Exonic hg19 SARC TCGA-X9-A971-01A 3 5 In-Frame Intra-chr q11.21 q11.21 Seq+ 59550 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBFA2T3-ACSF3 CBFA2T3 chr16 89007428 - ACSF3 chr16 89169012 + Exonic hg19 SKCM TCGA-Z2-AA3V-06A 6 4 5'UTR-5'UTR Intra-chr q24.3 Tumor suppressor gene q24.3 Pub 59551 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBFB-ATP13A3 CBFB chr16 67070658 - ATP13A3 chr3 194182965 - Exonic hg19 HNSC TCGA-CR-7388-01A 9 2 CDS-5'UTR Inter-chr q22.1 q29 Seq+ 59552 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBFB-CA7 CBFB chr16 67100701 - CA7 chr16 66880933 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 2 3 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 59553 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBFB-CES4A CBFB chr16 67070658 - CES4A chr16 67034541 + Exonic hg19 HNSC TCGA-CN-6988-01A 6 6 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 59554 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBFB-COG4 CBFB chr16 67100701 - COG4 chr16 70553634 - Exonic hg19 LGG TCGA-S9-A7R7-01A 3 2 In-Frame Intra-chr q22.1 q22.1 Seq+ 59555 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 - MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2815-03A 23 19 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 59556 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 - MYH11 chr16 15820911 - Exonic hg19 LAML TCGA-AB-2828-03A 37 20 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 59557 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 - MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2846-03A 20 15 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 59558 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 - MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2870-03A 66 33 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 59559 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 - MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2881-03A 17 20 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 59560 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 - MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2888-03B 9 8 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 59561 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 - MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2889-03A 44 21 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 59562 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 - MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2892-03A 28 11 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 59563 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 - MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2914-03A 26 10 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 59564 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 - MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2942-03A 9 19 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 59565 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67116211 - MYH11 chr16 15814908 - Exonic hg19 LAML TCGA-AB-2954-03A 29 11 In-Frame Intra-chr q22.1 Oncogene KB Pub Seq+ 59566 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBFB-NAE1 CBFB chr16 67070658 - NAE1 chr16 66857503 - Exonic hg19 ESCA TCGA-L5-A4OQ-01A 2 23 In-Frame Intra-chr q22.1 q22.1 Seq+ 59567 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBL-CXCR5 CBL chr11 119103405 - CXCR5 chr11 118764305 + Exonic hg19 PRAD TCGA-J9-A8CL-01A 5 3 Out-of-frame Intra-chr q23.3 Oncogene Tumor suppressor gene q23.3 Seq+ 59568 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBL-PDZD3 CBL chr11 119077322 - PDZD3 chr11 119059349 + Exonic hg19 LIHC TCGA-BC-A3KG-01A 9 2 In-Frame Intra-chr q23.3 Oncogene Tumor suppressor gene q23.3 59569 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBL-PHLDB1 CBL chr11 119156276 - PHLDB1 chr11 118514518 + Exonic hg19 BRCA TCGA-GM-A2DD-01A 2 1 In-Frame Intra-chr q23.3 Oncogene Tumor suppressor gene q23.3 Seq+ 59570 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBL-PHLDB1 CBL chr11 119077322 - PHLDB1 chr11 118484531 + Exonic hg19 ESCA TCGA-L5-A4OQ-01A 3 11 CDS-5'UTR Intra-chr q23.3 Oncogene Tumor suppressor gene q23.3 Seq+ 59571 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBL-SC5DL CBL chr11 119103405 - SC5DL chr11 121177095 + Exonic hg19 STAD TCGA-RD-A8MV-01A 2 11 Out-of-frame Intra-chr q23.3 Oncogene Tumor suppressor gene 59572 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBL-TRAPPC4 CBL chr11 119158656 - TRAPPC4 chr11 118894031 + Exonic hg19 ESCA TCGA-L5-A4OS-01A 11 39 In-Frame Intra-chr q23.3 Oncogene Tumor suppressor gene Seq+ 59573 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBL-VWA5A CBL chr11 119077322 - VWA5A chr11 123988204 + Exonic hg19 LUAD TCGA-38-4632-01A 33 13 CDS-5'UTR Intra-chr q23.3 Oncogene Tumor suppressor gene q24.2 Tumor suppressor gene Seq+ 59574 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBLB-IL17RE CBLB chr3 105572258 - IL17RE chr3 9944574 + Exonic hg19 PRAD TCGA-G9-6339-01A 3 1 In-Frame Intra-chr q13.11 p25.3 59575 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBLB-KIAA1524 CBLB chr3 105572258 - KIAA1524 chr3 108304059 - Exonic hg19 PRAD TCGA-EJ-A46G-01A 2 1 Out-of-frame Intra-chr q13.11 q13.13 Seq+ 59576 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBLC-PVR CBLC chr19 45303707 - PVR chr19 45164559 + Exonic hg19 LUSC TCGA-56-A4BX-01A 6 2 3'UTR-CDS Intra-chr q13.32 q13.31 59577 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBLC-RP11-419C5.2 CBLC chr19 45303707 - RP11-419C5.2 chr16 70020412 - Exonic hg19 OV TCGA-09-1659-01B 9 3 Out-of-frame Inter-chr q13.32 59578 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBLL1-SLC26A4 CBLL1 chr7 107389492 - SLC26A4 chr7 107302084 + Exonic hg19 LUAD TCGA-91-8499-01A 3 2 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 59579 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBR4-GALNTL6 CBR4 chr4 169923222 - GALNTL6 chr4 173730512 + Exonic hg19 SKCM TCGA-ER-A2NF-01A 3 2 In-Frame Intra-chr q32.3 q34.1 Seq+ 59580 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBWD2-MAP4K4 CBWD2 chr2 114212355 - MAP4K4 chr2 102481392 + Exonic hg19 LIHC TCGA-DD-A3A5-01A 2 2 In-Frame Intra-chr q14.1 q11.2 59581 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBX1-SSH2 CBX1 chr17 46178630 - SSH2 chr17 28022541 - Exonic hg19 BRCA TCGA-D8-A1XZ-01A 5 5 5'UTR-CDS Intra-chr q21.32 q11.2 Seq+ 59582 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBX3-CDK14 CBX3 chr7 26251376 - CDK14 chr7 90836480 + Exonic hg19 BLCA TCGA-ZF-AA5H-01A 8 50 CDS-3'UTR Intra-chr p15.2 q21.13 Seq+ 59583 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBX3-GARS CBX3 chr7 26241446 - GARS chr7 30665850 + Exonic hg19 BRCA TCGA-A2-A0CW-01A 267 490 5'UTR-CDS Intra-chr p15.2 p14.3 Seq+ 59584 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBX4-EFCAB5 CBX4 chr17 77811636 - EFCAB5 chr17 28418889 + Exonic hg19 BRCA TCGA-A8-A09C-01A 99 101 Out-of-frame Intra-chr q25.3 q11.2 Seq+ 59585 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBX4-RFK CBX4 chr17 77811636 - RFK chr9 79003572 - Exonic hg19 LUAD TCGA-97-A4M1-01A 25 6 Out-of-frame Inter-chr q25.3 q21.13 Seq+ 59586 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBX5-NFE2 CBX5 chr12 54639899 - NFE2 chr12 54689088 - Exonic hg19 KIRC TCGA-BP-4761-01A 10 6 CDS-5'UTR Intra-chr q13.13 Tumor suppressor gene q13.13 Transcription factor Seq+ 59587 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBX5-NFE2 CBX5 chr12 54645825 - NFE2 chr12 54689088 - Exonic hg19 CESC TCGA-DS-A5RQ-01A 4 6 CDS-5'UTR Intra-chr q13.13 Tumor suppressor gene q13.13 Transcription factor Seq+ 59588 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBX5-WDTC1 CBX5 chr12 54673792 - WDTC1 chr1 27608730 + Exonic hg19 UCEC TCGA-EO-A3KW-01A 13 7 5'UTR-CDS Inter-chr q13.13 Tumor suppressor gene p36.11 Seq+ 59589 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CBX7-VPREB1 CBX7 chr22 39545794 - VPREB1 chr22 22599358 + Exonic hg19 HNSC TCGA-CX-7086-01A 12 6 Out-of-frame Intra-chr q13.1 q11.22 Seq+ 59590 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CC2D1A-C19orf57 CC2D1A chr19 14017314 - C19orf57 chr19 13996868 - Exonic hg19 UCEC TCGA-B5-A1MS-01B 72 31 In-Frame Intra-chr p13.12 Transcription factor p13.12 Seq+ 59591 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CC2D1A-RNF207 CC2D1A chr19 14030015 - RNF207 chr1 6278349 + Exonic hg19 LUAD TCGA-38-4630-01A 15 11 Out-of-frame Inter-chr p13.12 Transcription factor p36.31 Seq+ 59592 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CC2D1A-RRBP1 CC2D1A chr19 14034624 - RRBP1 chr20 17660720 - Exonic hg19 BLCA TCGA-GU-A764-01A 2 6 CDS-5'UTR Inter-chr p13.12 Transcription factor p12.1 Seq+ 59593 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CC2D1A-ZMYND8 CC2D1A chr19 14030015 - ZMYND8 chr20 45938948 - Exonic hg19 PCPG TCGA-WB-A818-01A 6 6 In-Frame Inter-chr p13.12 Transcription factor q13.12 Seq+ 59594 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CC2D1A-ZSWIM4 CC2D1A chr19 14020771 - ZSWIM4 chr19 13930171 + Exonic hg19 STAD TCGA-BR-A452-01A 5 26 In-Frame Intra-chr p13.12 Transcription factor p13.13 Seq+ 59595 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CC2D1A-ZSWIM4 CC2D1A chr19 14038078 - ZSWIM4 chr19 13939459 + Exonic hg19 PCPG TCGA-PR-A5PH-01A 12 9 In-Frame Intra-chr p13.12 Transcription factor p13.13 Seq+ 59596 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCAR1-HNRNPH3 CCAR1 chr10 70509442 - HNRNPH3 chr10 70096956 + Exonic hg19 UCEC TCGA-FI-A3PX-01A 6 4 CDS-5'UTR Intra-chr q21.3 Tumor suppressor gene q21.3 Seq+ 59597 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCAR1-MCU CCAR1 chr10 70514584 - MCU chr10 74594117 + Exonic hg19 STAD TCGA-FP-8631-01A 6 14 In-Frame Intra-chr q21.3 Tumor suppressor gene q22.1 Seq+ 59598 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCAR1-TET1 CCAR1 chr10 70520949 - TET1 chr10 70432652 + Exonic hg19 ACC TCGA-OR-A5J7-01A 4 3 Out-of-frame Intra-chr q21.3 Tumor suppressor gene q21.3 Oncogene Transcription factor Seq+ 59599 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCAR1-TET1 CCAR1 chr10 70517134 - TET1 chr10 70432652 + Exonic hg19 UCEC TCGA-PG-A5BC-01A 3 3 Out-of-frame Intra-chr q21.3 Tumor suppressor gene q21.3 Oncogene Transcription factor Seq+ 59600 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC101-CDR2 CCDC101 chr16 28565418 - CDR2 chr16 22361170 - Exonic hg19 PAAD TCGA-3A-A9I5-01A 2 1 5'UTR-CDS Intra-chr p12.2 59601 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC106-CD37 CCDC106 chr19 56160950 - CD37 chr19 49838971 + Exonic hg19 BRCA TCGA-A1-A0SQ-01A 13 5 Out-of-frame Intra-chr q13.42 q13.33 Seq+ 59602 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC109B-C4BPA CCDC109B chr4 110481592 - C4BPA chr1 207317163 + Exonic hg19 BRCA TCGA-AO-A0J2-01A 6 1 Out-of-frame Inter-chr q32.2 59603 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC113-CPNE2 CCDC113 chr16 58301490 - CPNE2 chr16 57179997 + Exonic hg19 CESC TCGA-EK-A2PM-01A 13 5 In-Frame Intra-chr q21 q13 Seq+ 59604 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC117-OSTF1 CCDC117 chr22 29169766 - OSTF1 chr9 77761599 + Exonic hg19 LUAD TCGA-MP-A4TK-01A 11 4 Out-of-frame Inter-chr q12.1 q21.13 Seq+ 59605 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC122-LHFP CCDC122 chr13 44448978 - LHFP chr13 40175527 - Exonic hg19 PRAD TCGA-EJ-5510-01A 2 2 5'UTR-5'UTR Intra-chr q14.11 q14.11 Seq+ 59606 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC126-BTBD3 CCDC126 chr7 23651172 - BTBD3 chr20 11898982 + Exonic hg19 UCEC TCGA-AJ-A3IA-01A 4 9 CDS-5'UTR Inter-chr p15.3 p12.2 Seq+ 59607 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC126-OSBPL3 CCDC126 chr7 23651172 - OSBPL3 chr7 24932240 - Exonic hg19 LUAD TCGA-69-7979-01A 3 3 CDS-5'UTR Intra-chr p15.3 p15.3 59608 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC127-MUCL1 CCDC127 chr5 216844 - MUCL1 chr12 55250554 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 21 13 In-Frame Inter-chr p15.33 q13.2 Seq+ 59609 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC127-SDHA CCDC127 chr5 218208 - SDHA chr5 223597 + Exonic hg19 LUSC TCGA-96-7544-01A 4 10 5'UTR-CDS Intra-chr p15.33 p15.33 Oncogene Tumor suppressor gene Seq+ 59610 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC127-SDHA CCDC127 chr5 216844 - SDHA chr5 233592 + Exonic hg19 LGG TCGA-S9-A6UA-01A 11 42 In-Frame Intra-chr p15.33 p15.33 Oncogene Tumor suppressor gene Seq+ 59611 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC127-TERT CCDC127 chr5 216844 - TERT chr5 1282739 - Exonic hg19 GBM TCGA-06-2564-01A 3 8 In-Frame Intra-chr p15.33 p15.33 Oncogene Seq+ 59612 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC129-DEFB118 CCDC129 chr7 31618048 - DEFB118 chr20 29960660 + Exonic hg19 BRCA TCGA-E2-A150-01A 3 2 Out-of-frame Inter-chr p14.3 q11.21 Seq+ 59613 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC132-CDH1 CCDC132 chr7 92940584 - CDH1 chr16 68862077 + Exonic hg19 BRCA TCGA-AO-A12E-01A 26 15 In-Frame Inter-chr q22.1 Oncogene Tumor suppressor gene Seq+ 59614 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC132-PPP6R3 CCDC132 chr7 92926555 - PPP6R3 chr11 68312306 + Exonic hg19 LUAD TCGA-NJ-A4YQ-01A 4 1 In-Frame Inter-chr q13.2 59615 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC134-MEI1 CCDC134 chr22 42196770 - MEI1 chr22 42189833 + Exonic hg19 OV TCGA-13-0887-01A 22 7 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 59616 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC138-GFRAL CCDC138 chr2 109432561 - GFRAL chr6 55263978 + Exonic hg19 BRCA TCGA-C8-A12U-01A 2 2 Out-of-frame Inter-chr q13 p12.1 Seq+ 59617 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC14-ADAM19 CCDC14 chr3 123667538 - ADAM19 chr5 156991451 - Exonic hg19 BRCA TCGA-E2-A15F-01A 3 1 In-Frame Inter-chr q21.1 q33.3 59618 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC14-C14orf164 CCDC14 chr3 123649949 - C14orf164 chr14 23662534 + Exonic hg19 SARC TCGA-DX-A8BR-01A 4 1 Out-of-frame Inter-chr q21.1 59619 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC148-WDSUB1 CCDC148 chr2 159165945 - WDSUB1 chr2 160092701 - Exonic hg19 BRCA TCGA-C8-A1HO-01A 4 6 Out-of-frame Intra-chr q24.1 q24.2 Seq+ 59620 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC149-GABRB1 CCDC149 chr4 24914439 - GABRB1 chr4 47033931 + Exonic hg19 BRCA TCGA-S3-A6ZF-01A 4 2 Out-of-frame Intra-chr p15.2 p12 Seq+ 59621 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC149-RBPJ CCDC149 chr4 24807739 - RBPJ chr4 26274229 + Exonic hg19 LGG TCGA-S9-A7IS-01A 2 1 3'UTR-5'UTR Intra-chr p15.2 p15.2 Transcription factor 59622 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC157-COL21A1 CCDC157 chr22 30758103 - COL21A1 chr6 55942371 - Exonic hg19 UCEC TCGA-PG-A915-01A 10 6 5'UTR-CDS Inter-chr q12.2 p12.1 Seq+ 59623 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC157-EWSR1 CCDC157 chr22 30753121 - EWSR1 chr22 29688126 + Exonic hg19 UCS TCGA-NA-A4QV-01A 38 33 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 59624 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC158-MSRB3 CCDC158 chr4 77288447 - MSRB3 chr12 65847508 + Exonic hg19 BRCA TCGA-3C-AAAU-01A 2 2 Out-of-frame Inter-chr q21.1 q14.3 59625 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC165-CCT8 CCDC165 chr18 8720494 - CCT8 chr21 30437426 - Exonic hg19 LUAD TCGA-O1-A52J-01A 7 3 Out-of-frame Inter-chr q21.3 59626 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC165-DLGAP1 CCDC165 chr18 8720494 - DLGAP1 chr18 3742512 - Exonic hg19 BRCA TCGA-BH-A0H9-01A 3 2 Out-of-frame Intra-chr p11.31 59627 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC165-LRRC41 CCDC165 chr18 8826230 - LRRC41 chr1 46764042 - Exonic hg19 KIRC TCGA-AK-3445-01A 15 3 Out-of-frame Inter-chr p33 59628 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC167-RRP7A CCDC167 chr6 37467598 - RRP7A chr22 42914153 - Exonic hg19 SKCM TCGA-EB-A5UM-01A 8 9 Out-of-frame Inter-chr p21.2 q13.2 Seq+ 59629 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC22-ZNF673 CCDC22 chrX 49099928 - ZNF673 chrX 46309866 + Exonic hg19 PRAD TCGA-ZG-A9KY-01A 3 11 CDS-5'UTR Intra-chr p11.23 59630 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC23-EBNA1BP2 CCDC23 chr1 43282102 - EBNA1BP2 chr1 43632590 - Exonic hg19 HNSC TCGA-BB-8596-01A 4 2 Out-of-frame Intra-chr p34.2 59631 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC24-ST3GAL3 CCDC24 chr1 44457676 - ST3GAL3 chr1 44201904 + Exonic hg19 CESC TCGA-ZJ-AAXN-01A 3 3 CDS-5'UTR Intra-chr p34.1 p34.1 Seq+ 59632 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC25-PLEKHG4B CCDC25 chr8 27630030 - PLEKHG4B chr5 143162 + Exonic hg19 SARC TCGA-JV-A5VE-01A 3 1 In-Frame Inter-chr p21.1 p15.33 59633 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC3-FXYD1 CCDC3 chr10 13040338 - FXYD1 chr19 35630980 + Exonic hg19 PRAD TCGA-V1-A9O5-06A 62 62 CDS-5'UTR Inter-chr p13 q13.12 Seq+ 59634 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC36-NR3C2 CCDC36 chr3 49237006 - NR3C2 chr4 149116013 - Exonic hg19 SARC TCGA-SG-A6Z4-01A 2 3 5'UTR-CDS Inter-chr p21.31 q31.23 Transcription factor 59635 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC39-PECR CCDC39 chr3 180565295 - PECR chr2 216930200 - Exonic hg19 SARC TCGA-IE-A3OV-01A 3 1 5'UTR-CDS Inter-chr q26.33 q35 Seq+ 59636 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC40-PRKG1 CCDC40 chr17 78011985 - PRKG1 chr10 54048486 + Exonic hg19 SARC TCGA-QQ-A8VH-01A 4 1 Out-of-frame Inter-chr q25.3 q11.23 Seq+ 59637 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC41-LIN7A CCDC41 chr12 94853333 - LIN7A chr12 81205462 - Exonic hg19 BRCA TCGA-A2-A0CZ-01A 12 8 5'UTR-CDS Intra-chr q21.31 Seq+ 59638 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC47-TERT CCDC47 chr17 61850772 - TERT chr5 1282739 - Exonic hg19 ACC TCGA-OR-A5JS-01A 3 2 5'UTR-CDS Inter-chr q23.3 p15.33 Oncogene Seq+ 59639 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC47-USP37 CCDC47 chr17 61838274 - USP37 chr2 219418447 - Exonic hg19 HNSC TCGA-F7-A50I-01A 8 1 In-Frame Inter-chr q23.3 q35 Seq+ 59640 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC50-LSAMP CCDC50 chr3 191087825 - LSAMP chr3 116163802 - Exonic hg19 SARC TCGA-DX-A8BL-01A 21 10 Out-of-frame Intra-chr q28 q13.31 Tumor suppressor gene Seq+ 59641 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC50-OSTN CCDC50 chr3 191078948 - OSTN chr3 190980655 + Exonic hg19 SKCM TCGA-FR-A7U8-06A 211 270 Out-of-frame Intra-chr q28 q28 Seq+ 59642 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC57-ATPAF2 CCDC57 chr17 80170661 - ATPAF2 chr17 17931973 - Exonic hg19 SARC TCGA-FX-A3TO-01A 2 1 5'UTR-CDS Intra-chr q25.3 p11.2 59643 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC57-CSNK1D CCDC57 chr17 80085568 - CSNK1D chr17 80211120 - Exonic hg19 LUSC TCGA-21-A5DI-01A 26 9 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 59644 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC57-CSNK1D CCDC57 chr17 80109436 - CSNK1D chr17 80209403 - Exonic hg19 UCEC TCGA-B5-A5OD-01A 9 13 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 59645 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC57-CSNK1D CCDC57 chr17 80085568 - CSNK1D chr17 80223672 - Exonic hg19 LIHC TCGA-BC-A10T-01A 2 1 In-Frame Intra-chr q25.3 q25.3 Seq+ 59646 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC57-RAB40B CCDC57 chr17 80109436 - RAB40B chr17 80622432 - Exonic hg19 PRAD TCGA-ZG-A9KY-01A 10 6 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 59647 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61665880 - ANK3 chr10 61789584 - Exonic hg19 OV TCGA-04-1517-01A 154 39 CDS-3'UTR Intra-chr q21.2 q21.2 Seq+ 59648 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61665880 - ANK3 chr10 61827767 - Exonic hg19 OV TCGA-13-0760-01A 5 17 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 59649 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61665880 - ANK3 chr10 61802514 - Exonic hg19 OV TCGA-24-2033-01A 6 57 In-Frame Intra-chr q21.2 q21.2 Seq+ 59650 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61665880 - ANK3 chr10 61802517 - Exonic hg19 OV TCGA-61-1914-01A 13 19 In-Frame Intra-chr q21.2 q21.2 Seq+ 59651 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61665880 - ANK3 chr10 61789584 - Exonic hg19 LUAD TCGA-64-5815-01A 5 4 CDS-3'UTR Intra-chr q21.2 q21.2 Seq+ 59652 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61665880 - ANK3 chr10 61842495 - Exonic hg19 UCEC TCGA-AX-A3FW-01A 8 8 In-Frame Intra-chr q21.2 q21.2 Seq+ 59653 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61564178 - ANK3 chr10 61848116 - Exonic hg19 UCEC TCGA-B5-A5OD-01A 2 1 In-Frame Intra-chr q21.2 q21.2 Seq+ 59654 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61564178 - ANK3 chr10 61827767 - Exonic hg19 BRCA TCGA-D8-A140-01A 49 32 In-Frame Intra-chr q21.2 q21.2 Seq+ 59655 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC6-ANK3 CCDC6 chr10 61574410 - ANK3 chr10 61789584 - Exonic hg19 BRCA TCGA-EW-A1P4-01A 64 43 CDS-3'UTR Intra-chr q21.2 q21.2 Seq+ 59656 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC6-LIPI CCDC6 chr10 61612311 - LIPI chr21 15481401 - Exonic hg19 LUAD TCGA-44-8117-01A 70 41 Out-of-frame Inter-chr q21.2 q11.2 Seq+ 59657 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-BJ-A0ZJ-01A 84 39 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 59658 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-BJ-A28Z-01A 58 17 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 59659 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61554231 - RET chr10 43612032 + Exonic hg19 THCA TCGA-CE-A13K-01A 65 30 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 59660 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-DJ-A3V3-01A 64 42 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 59661 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-DJ-A4UQ-01A 80 49 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 59662 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-DJ-A4V5-01A 83 70 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 59663 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-DO-A1JZ-01A 103 61 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 59664 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-E3-A3E0-01A 122 70 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 59665 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-EL-A3TB-01A 106 72 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 59666 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-EL-A3ZP-01A 55 7 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 59667 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-ET-A3DR-01A 89 42 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 59668 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665880 - RET chr10 43612032 + Exonic hg19 THCA TCGA-FK-A3SE-01A 228 115 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 59669 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC6-UBE2D1 CCDC6 chr10 61665880 - UBE2D1 chr10 60121098 + Exonic hg19 BRCA TCGA-AO-A0J6-01A 2 2 In-Frame Intra-chr q21.2 q21.1 Seq+ 59670 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC61-CHST1 CCDC61 chr19 46506424 - CHST1 chr11 45674156 - Exonic hg19 LGG TCGA-DH-5142-01A 18 5 CDS-5'UTR Inter-chr q13.32 p11.2 Seq+ 59671 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC61-FUT2 CCDC61 chr19 46511559 - FUT2 chr19 49206212 + Exonic hg19 BRCA TCGA-EW-A6S9-01A 17 3 CDS-5'UTR Intra-chr q13.32 q13.33 Seq+ 59672 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC64-GALNT9 CCDC64 chr12 120436540 - GALNT9 chr12 132688235 - Exonic hg19 BRCA TCGA-B6-A0RH-01A 4 2 In-Frame Intra-chr q24.33 59673 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC64-HLCS CCDC64 chr12 120527875 - HLCS chr21 38139586 - Exonic hg19 LIHC TCGA-UB-A7ME-01A 2 1 Out-of-frame Inter-chr q22.13 59674 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC66-FLNB CCDC66 chr3 56628056 - FLNB chr3 58087930 + Exonic hg19 BRCA TCGA-GM-A3NY-01A 6 5 Out-of-frame Intra-chr p14.3 p14.3 Seq+ 59675 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC73-CAV1 CCDC73 chr11 32815895 - CAV1 chr7 116199000 + Exonic hg19 LIHC TCGA-DD-A73F-01A 3 2 5'UTR-CDS Inter-chr p13 q31.2 Tumor suppressor gene Seq+ 59676 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC73-SLC15A4 CCDC73 chr11 32815895 - SLC15A4 chr12 129283962 - Exonic hg19 SARC TCGA-DX-A6YS-01A 3 1 5'UTR-CDS Inter-chr p13 q24.33 59677 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC75-DYM CCDC75 chr2 37315583 - DYM chr18 46690157 - Exonic hg19 SKCM TCGA-ER-A19E-06A 53 37 In-Frame Inter-chr q21.1 59678 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC80-ANKS1A CCDC80 chr3 112324113 - ANKS1A chr6 34977682 + Exonic hg19 PRAD TCGA-CH-5739-01A 2 1 Out-of-frame Inter-chr q13.2 p21.31 59679 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC88B-AKR1C1 CCDC88B chr11 64110797 - AKR1C1 chr10 4950543 + Exonic hg19 LUSC TCGA-66-2758-01A 16 9 Out-of-frame Inter-chr q13.1 p15.1 59680 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC88B-C11orf20 CCDC88B chr11 64119858 - C11orf20 chr11 64072015 + Exonic hg19 LUSC TCGA-43-5670-01A 16 5 Out-of-frame Intra-chr q13.1 Seq+ 59681 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC88C-C14orf159 CCDC88C chr14 91760517 - C14orf159 chr14 91681749 + Exonic hg19 BLCA TCGA-UY-A9PE-01A 10 13 Out-of-frame Intra-chr q32.12 q32.11 Seq+ 59682 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC88C-KIAA0247 CCDC88C chr14 91875003 - KIAA0247 chr14 70125230 + Exonic hg19 BLCA TCGA-XF-AAMW-01A 4 3 CDS-5'UTR Intra-chr q32.12 59683 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC9-NUP62 CCDC9 chr19 47770049 - NUP62 chr19 50413141 - Exonic hg19 BLCA TCGA-FD-A6TC-01A 30 19 CDS-5'UTR Intra-chr q13.32 q13.33 Seq+ 59684 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC9-PVRL2 CCDC9 chr19 47764096 - PVRL2 chr19 45368528 + Exonic hg19 PAAD TCGA-3A-A9IU-01A 17 7 Out-of-frame Intra-chr q13.32 Seq+ 59685 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC90A-S100A10 CCDC90A chr6 13800573 - S100A10 chr1 151958727 - Exonic hg19 BRCA TCGA-E9-A3QA-01A 104 75 CDS-5'UTR Inter-chr q21.3 Seq+ 59686 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC90B-CLPB CCDC90B chr11 82996170 - CLPB chr11 72013392 - Exonic hg19 LUAD TCGA-95-7039-01A 10 3 Out-of-frame Intra-chr q14.1 q13.4 Seq+ 59687 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC91-AEBP2 CCDC91 chr12 28412375 - AEBP2 chr12 19615444 + Exonic hg19 TGCT TCGA-2G-AAF8-01A 15 11 Out-of-frame Intra-chr p11.22 p12.3 Transcription factor Seq+ 59688 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC91-FAR2 CCDC91 chr12 28412375 - FAR2 chr12 29423345 + Exonic hg19 LGG TCGA-HT-7873-01B 47 26 CDS-5'UTR Intra-chr p11.22 p11.22 Seq+ 59689 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC91-KRT7 CCDC91 chr12 28343574 - KRT7 chr12 52628939 + Exonic hg19 LGG TCGA-TM-A84I-01A 2 5 5'UTR-CDS Intra-chr p11.22 q13.13 Seq+ 59690 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC91-LYRM5 CCDC91 chr12 28544344 - LYRM5 chr12 25357025 + Exonic hg19 BRCA TCGA-AR-A1AH-01A 8 11 In-Frame Intra-chr p11.22 Seq+ 59691 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC91-NTSR1 CCDC91 chr12 28544344 - NTSR1 chr20 61386037 + Exonic hg19 LUAD TCGA-05-4415-01A 9 4 In-Frame Inter-chr p11.22 q13.33 Seq+ 59692 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC91-PDZRN4 CCDC91 chr12 28637098 - PDZRN4 chr12 41900258 + Exonic hg19 LUSC TCGA-22-4595-01A 5 3 In-Frame Intra-chr p11.22 q12 Seq+ 59693 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC91-PTK2 CCDC91 chr12 28605587 - PTK2 chr8 141696793 - Exonic hg19 SARC TCGA-DX-A48N-01A 8 5 In-Frame Inter-chr p11.22 q24.3 Seq+ 59694 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC91-RP11-677C1.2 CCDC91 chr12 28515448 - RP11-677C1.2 chr12 29617338 + Exonic hg19 STAD TCGA-CD-A48A-01A 12 44 Out-of-frame Intra-chr p11.22 59695 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC91-TRDN CCDC91 chr12 28515448 - TRDN chr6 123595815 - Exonic hg19 SARC TCGA-DX-A8BS-01A 2 1 Out-of-frame Inter-chr p11.22 q22.31 Seq+ 59696 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC92-MAN1A1 CCDC92 chr12 124427291 - MAN1A1 chr6 119623268 - Exonic hg19 SARC TCGA-DX-A3LS-01A 2 5 In-Frame Inter-chr q22.31 59697 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC97-GTF2A2 CCDC97 chr19 41816261 - GTF2A2 chr15 59944525 - Exonic hg19 LUAD TCGA-49-6743-01A 127 60 CDS-5'UTR Inter-chr q13.2 q22.2 Seq+ 59698 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC97-SIPA1L3 CCDC97 chr19 41816261 - SIPA1L3 chr19 38519729 + Exonic hg19 LUSC TCGA-34-5241-01A 4 2 CDS-5'UTR Intra-chr q13.2 q13.13 Seq+ 59699 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCDC99-SCGB3A2 CCDC99 chr5 169010893 - SCGB3A2 chr5 147261009 + Exonic hg19 SARC TCGA-3B-A9HS-01A 100 47 5'UTR-CDS Intra-chr q32 59700 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCL14-MYH10 CCL14 chr17 34313607 - MYH10 chr17 8526815 - Exonic hg19 CHOL TCGA-W5-AA31-01A 22 7 CDS-5'UTR Intra-chr q12 p13.1 Seq+ 59701 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCL28-PLCXD3 CCL28 chr5 43397137 - PLCXD3 chr5 41382636 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 5 1 Out-of-frame Intra-chr p12 p13.1 59702 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCM2-C7orf10 CCM2 chr7 45039962 - C7orf10 chr7 40899915 + Exonic hg19 BRCA TCGA-OL-A66P-01A 14 11 Out-of-frame Intra-chr p13 Seq+ 59703 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCNB2-RNF111 CCNB2 chr15 59409567 - RNF111 chr15 59386982 + Exonic hg19 STAD TCGA-CD-8535-01A 5 30 Out-of-frame Intra-chr q22.2 q22.1 Tumor suppressor gene Seq+ 59704 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCNB2-TCF12 CCNB2 chr15 59409567 - TCF12 chr15 57578355 + Exonic hg19 STAD TCGA-VQ-A92D-01A 2 55 CDS-3'UTR Intra-chr q22.2 q21.3 Oncogene Transcription factor Seq+ 59705 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCNC-FAM201A CCNC chr6 100016372 - FAM201A chr9 38621829 + Exonic hg19 CHOL TCGA-YR-A95A-01A 12 7 CDS-5'UTR Inter-chr q16.2 Tumor suppressor gene p13.1 Seq+ 59706 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCNC-MICAL1 CCNC chr6 100016372 - MICAL1 chr6 109767975 - Exonic hg19 SARC TCGA-DX-AB2T-01A 5 2 Out-of-frame Intra-chr q16.2 Tumor suppressor gene q21 Seq+ 59707 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCND3-C6orf89 CCND3 chr6 42016239 - C6orf89 chr6 36846784 + Exonic hg19 GBM TCGA-06-0129-01A 2 9 5'UTR-5'UTR Intra-chr p21.1 p21.2 Seq+ 59708 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCND3-EHMT2 CCND3 chr6 42016239 - EHMT2 chr6 31848625 - Exonic hg19 STAD TCGA-BR-A4QI-01A 9 204 5'UTR-CDS Intra-chr p21.1 Seq+ 59709 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCND3-EXOC4 CCND3 chr6 42016239 - EXOC4 chr7 133682245 + Exonic hg19 PRAD TCGA-EJ-8474-01A 4 1 5'UTR-CDS Inter-chr p21.1 q33 59710 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCND3-GUCA1B CCND3 chr6 42016239 - GUCA1B chr6 42156469 - Exonic hg19 BRCA TCGA-AR-A1AI-01A 27 26 5'UTR-CDS Intra-chr p21.1 p21.1 Seq+ 59711 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCND3-LUZP1 CCND3 chr6 42016239 - LUZP1 chr1 23415546 - Exonic hg19 UCS TCGA-N8-A4PI-01A 3 4 5'UTR-CDS Inter-chr p21.1 p36.12 Seq+ 59712 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCND3-VPS52 CCND3 chr6 42016239 - VPS52 chr6 33237596 - Exonic hg19 LUSC TCGA-92-8063-01A 3 1 5'UTR-CDS Intra-chr p21.1 59713 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCNF-NOL4 CCNF chr16 2489827 - NOL4 chr18 31673561 - Exonic hg19 LGG TCGA-TM-A84I-01A 80 12 In-Frame Inter-chr p13.3 q12.1 Seq+ 59714 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCNG1-SLCO6A1 CCNG1 chr5 162871487 - SLCO6A1 chr5 101709198 - Exonic hg19 ACC TCGA-OR-A5JS-01A 11 3 3'UTR-CDS Intra-chr q34 q21.1 Seq+ 59715 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCNI-MRPL1 CCNI chr4 77996625 - MRPL1 chr4 78870951 + Exonic hg19 LUSC TCGA-85-8351-01A 80 22 5'UTR-CDS Intra-chr q21.1 q21.1 Seq+ 59716 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCNK-C9orf93 CCNK chr14 99969981 - C9orf93 chr9 15920268 + Exonic hg19 BRCA TCGA-BH-A1FM-01A 34 23 Out-of-frame Inter-chr q32.2 59717 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCNK-ZNF365 CCNK chr14 99961966 - ZNF365 chr10 64425889 + Exonic hg19 SARC TCGA-DX-A6BF-01A 10 11 Out-of-frame Inter-chr q32.2 q21.2 Transcription factor Seq+ 59718 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCNL2-MRPL20 CCNL2 chr1 1333613 - MRPL20 chr1 1337636 - Exonic hg19 COAD TCGA-D5-6924-01A 56 41 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 59719 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCNL2-RP4-758J18.6 CCNL2 chr1 1333613 - RP4-758J18.6 chr1 1354929 - Exonic hg19 BRCA TCGA-AC-A8OR-01A 8 7 Out-of-frame Intra-chr p36.33 59720 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCNL2-TYK2 CCNL2 chr1 1322093 - TYK2 chr19 10491352 - Exonic hg19 BLCA TCGA-K4-A5RH-01A 2 2 Out-of-frame Inter-chr p36.33 p13.2 TK:JakA 59721 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCNT1-ADCY6 CCNT1 chr12 49094796 - ADCY6 chr12 49177221 - Exonic hg19 BLCA TCGA-DK-A6B2-01A 3 1 CDS-5'UTR Intra-chr q13.12 q13.12 Seq+ 59722 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCNT1-RP11-579D7.1 CCNT1 chr12 49108226 - RP11-579D7.1 chr12 49152992 + Exonic hg19 LIHC TCGA-DD-A73G-01A 5 9 Out-of-frame Intra-chr q13.12 59723 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCNT2-ACMSD CCNT2 chr2 135677461 - ACMSD chr2 135602803 + Exonic hg19 LIHC TCGA-BC-A10R-01A 81 38 In-Frame Intra-chr q21.3 q21.3 Seq+ 59724 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCNT2-ACMSD CCNT2 chr2 135677461 - ACMSD chr2 135655911 + Exonic hg19 SARC TCGA-DX-A3M1-01A 3 1 In-Frame Intra-chr q21.3 q21.3 Seq+ 59725 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCNT2-YSK4 CCNT2 chr2 135705469 - YSK4 chr2 135722486 - Exonic hg19 KIRC TCGA-B0-4815-01A 4 1 Out-of-frame Intra-chr q21.3 Seq+ 59726 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCNY-AKAP10 CCNY chr10 35626135 - AKAP10 chr17 19871774 - Exonic hg19 BRCA TCGA-AR-A2LR-01A 6 5 In-Frame Inter-chr p11.21 p11.2 Seq+ 59727 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCNY-ANK3 CCNY chr10 35626135 - ANK3 chr10 61874089 - Exonic hg19 BLCA TCGA-FD-A3SP-01A 4 4 Out-of-frame Intra-chr p11.21 q21.2 Seq+ 59728 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCNY-BRAF CCNY chr10 35626135 - BRAF chr7 140482957 - Exonic hg19 THCA TCGA-EM-A3AQ-01A 3 2 In-Frame Inter-chr p11.21 q34 TKL:RAF Oncogene 59729 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCNY-DENND1A CCNY chr10 35626135 - DENND1A chr9 126520101 - Exonic hg19 BRCA TCGA-AR-A256-01A 35 11 Out-of-frame Inter-chr p11.21 q33.3 Seq+ 59730 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCNY-PTPRD CCNY chr10 35819171 - PTPRD chr9 10033790 - Exonic hg19 KIRC TCGA-B0-4688-01A 24 6 CDS-5'UTR Inter-chr p11.21 Oncogene Tumor suppressor gene Seq+ 59731 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCNY-VWA3B CCNY chr10 35790463 - VWA3B chr2 98906974 + Exonic hg19 LUSC TCGA-22-A5C4-01A 12 6 In-Frame Inter-chr p11.21 q11.2 Seq+ 59732 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCNY-ZNF248 CCNY chr10 35626135 - ZNF248 chr10 38127039 - Exonic hg19 ESCA TCGA-XP-A8T6-01A 3 6 Out-of-frame Intra-chr p11.21 p11.21 Transcription factor 59733 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCNY-ZNF496 CCNY chr10 35790463 - ZNF496 chr1 247473758 - Exonic hg19 BRCA TCGA-B6-A0I8-01A 16 8 In-Frame Inter-chr p11.21 q44 Transcription factor Seq+ 59734 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCNYL2-TSC2 CCNYL2 chr10 42916211 - TSC2 chr16 2108748 + Exonic hg19 TGCT TCGA-2G-AAG5-01A 3 1 Out-of-frame Inter-chr q11.21 p13.3 Oncogene Tumor suppressor gene 59735 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCRN4L-PET112 CCRN4L chr4 139937325 - PET112 chr4 152629253 - Exonic hg19 COAD TCGA-F4-6569-01A 2 1 In-Frame Intra-chr 59736 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCT2-CACNG3 CCT2 chr12 69979304 - CACNG3 chr16 24372673 + Exonic hg19 SARC TCGA-DX-A6BG-01A 381 516 Out-of-frame Inter-chr q15 p12.1 Seq+ 59737 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCT2-CPM CCT2 chr12 69979304 - CPM chr12 69252851 - Exonic hg19 PCPG TCGA-PR-A5PF-01A 15 9 Out-of-frame Intra-chr q15 q15 Seq+ 59738 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCT2-CXCR5 CCT2 chr12 69995350 - CXCR5 chr11 118754475 + Exonic hg19 BRCA TCGA-E9-A22B-01A 2 1 3'UTR-5'UTR Inter-chr q15 q23.3 59739 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCT2-DEPDC4 CCT2 chr12 69987393 - DEPDC4 chr12 100646314 - Exonic hg19 SARC TCGA-DX-A23Y-01A 120 99 Out-of-frame Intra-chr q15 q23.1 Seq+ 59740 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCT2-FRS2 CCT2 chr12 69987393 - FRS2 chr12 69962785 + Exonic hg19 LUSC TCGA-NC-A5HQ-01A 6 6 CDS-5'UTR Intra-chr q15 q15 59741 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCT2-KCNC2 CCT2 chr12 69980124 - KCNC2 chr12 75437593 - Exonic hg19 SARC TCGA-DX-A3LS-01A 36 20 Out-of-frame Intra-chr q15 q21.1 Seq+ 59742 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCT2-KRT78 CCT2 chr12 69981786 - KRT78 chr12 53242405 - Exonic hg19 ACC TCGA-OR-A5KT-01A 5 5 Out-of-frame Intra-chr q15 q13.13 59743 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCT3-ARHGEF11 CCT3 chr1 156304504 - ARHGEF11 chr1 156931567 - Exonic hg19 OV TCGA-13-A5FT-01A 8 46 In-Frame Intra-chr q22 q23.1 Seq+ 59744 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCT3-FAR1 CCT3 chr1 156278760 - FAR1 chr11 13744912 + Exonic hg19 SKCM TCGA-EE-A29G-06A 2 16 Out-of-frame Inter-chr q22 p15.3 59745 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCT3-NDUFV1 CCT3 chr1 156278760 - NDUFV1 chr11 67375697 + Exonic hg19 LUAD TCGA-71-6725-01A 2 13 Out-of-frame Inter-chr q22 q13.2 59746 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCT3-SQSTM1 CCT3 chr1 156278760 - SQSTM1 chr5 179250858 + Exonic hg19 SKCM TCGA-EE-A2MD-06A 2 1 3'UTR-CDS Inter-chr q22 q35.3 59747 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCT3-STAT6 CCT3 chr1 156278760 - STAT6 chr12 57496773 - Exonic hg19 CESC TCGA-EA-A5ZE-01A 2 25 Out-of-frame Inter-chr q22 q13.3 Transcription factor 59748 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCT3-SYT2 CCT3 chr1 156303338 - SYT2 chr1 202574917 - Exonic hg19 BRCA TCGA-AO-A0J3-01A 41 33 CDS-5'UTR Intra-chr q22 q32.1 Seq+ 59749 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCT4-BIRC6 CCT4 chr2 62107421 - BIRC6 chr2 32756422 + Exonic hg19 ESCA TCGA-L5-A8NE-01A 5 37 In-Frame Intra-chr p15 p22.3 Seq+ 59750 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCT7-UTRN CCT7 chr2 73480132 - UTRN chr6 144665237 + Exonic hg19 LUSC TCGA-85-6560-01A 2 2 Out-of-frame Inter-chr p13.2 q24.2 59751 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CCT8-LHX4 CCT8 chr21 30432862 - LHX4 chr1 180217420 + Exonic hg19 BRCA TCGA-EW-A6SA-01A 14 17 Out-of-frame Inter-chr q21.3 q25.2 Tumor suppressor gene Transcription factor Seq+ 59752 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD151-EFCAB4A CD151 chr11 837354 - EFCAB4A chr11 831224 + Exonic hg19 BRCA TCGA-D8-A27M-01A 333 171 In-Frame Intra-chr p15.5 Seq+ 59753 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD151-EPS8L2 CD151 chr11 836843 - EPS8L2 chr11 710422 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 35 24 Out-of-frame Intra-chr p15.5 p15.5 Seq+ 59754 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD274-IGFBPL1 CD274 chr9 5465606 - IGFBPL1 chr9 38409214 - Exonic hg19 STAD TCGA-CG-4477-01A 12 10 CDS-3'UTR Intra-chr p24.1 Oncogene p13.1 Tumor suppressor gene Seq+ 59755 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD276-PARP16 CD276 chr15 73976801 - PARP16 chr15 65563410 - Exonic hg19 BRCA TCGA-E2-A1LE-01A 4 4 5'UTR-CDS Intra-chr q24.1 q22.31 Seq+ 59756 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD2AP-FKBP5 CD2AP chr6 47501491 - FKBP5 chr6 35688325 - Exonic hg19 SKCM TCGA-EB-A5SH-06A 27 11 CDS-5'UTR Intra-chr p12.3 p21.31 Seq+ 59757 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD2AP-MUTED CD2AP chr6 47522502 - MUTED chr6 8016061 - Exonic hg19 BRCA TCGA-OL-A6VO-01A 32 27 Out-of-frame Intra-chr p12.3 59758 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD2AP-NFKBIE CD2AP chr6 47445984 - NFKBIE chr6 44228276 - Exonic hg19 LUAD TCGA-05-4402-01A 12 41 In-Frame Intra-chr p12.3 p21.1 Seq+ 59759 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD2AP-SLC25A13 CD2AP chr6 47501491 - SLC25A13 chr7 95800836 - Exonic hg19 READ TCGA-EI-6510-01A 60 55 In-Frame Inter-chr p12.3 q21.3 Seq+ 59760 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD2AP-SUPT3H CD2AP chr6 47501491 - SUPT3H chr6 45073743 - Exonic hg19 LUAD TCGA-55-1595-01A 16 5 Out-of-frame Intra-chr p12.3 p21.1 Seq+ 59761 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD2AP-UQCRH CD2AP chr6 47471176 - UQCRH chr1 46782224 + Exonic hg19 STAD TCGA-BR-8060-01A 2 49 In-Frame Inter-chr p12.3 p33 Seq+ 59762 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD2AP-USP49 CD2AP chr6 47471176 - USP49 chr6 41774749 - Exonic hg19 KIRC TCGA-A3-3313-01A 59 50 CDS-5'UTR Intra-chr p12.3 p21.1 Seq+ 59763 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD302-ALPL CD302 chr2 160634449 - ALPL chr1 21880471 + Exonic hg19 BRCA TCGA-AN-A0AT-01A 18 8 CDS-5'UTR Inter-chr q24.2 p36.12 Tumor suppressor gene Seq+ 59764 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD44-CAPRIN1 CD44 chr11 35160917 - CAPRIN1 chr11 34110942 + Exonic hg19 UCS TCGA-NG-A4VU-01A 173 82 In-Frame Intra-chr p13 Oncogene Tumor suppressor gene p13 Seq+ 59765 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD44-EXT2 CD44 chr11 35160917 - EXT2 chr11 44265699 + Exonic hg19 SARC TCGA-X6-A8C6-01A 32 45 Out-of-frame Intra-chr p13 Oncogene Tumor suppressor gene p11.2 Oncogene Tumor suppressor gene Seq+ 59766 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD46-MAPKAPK2 CD46 chr1 207959027 - MAPKAPK2 chr1 206902055 + Exonic hg19 STAD TCGA-CG-4449-01A 51 89 Out-of-frame Intra-chr q32.2 q32.1 CAMK:MAPKAPK Seq+ 59767 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD47-ZFR CD47 chr3 107762146 - ZFR chr5 32395410 - Exonic hg19 PRAD TCGA-CH-5761-01A 2 6 3'UTR-CDS Inter-chr q13.12 p13.3 59768 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD55-C4BPA CD55 chr1 207500182 - C4BPA chr1 207300058 + Exonic hg19 LUAD TCGA-86-7953-01A 20 41 In-Frame Intra-chr q32.2 q32.2 Seq+ 59769 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD55-C4BPA CD55 chr1 207512762 - C4BPA chr1 207317889 + Exonic hg19 PAAD TCGA-IB-7654-01A 301 223 Out-of-frame Intra-chr q32.2 q32.2 Seq+ 59770 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD55-CENPL CD55 chr1 207510163 - CENPL chr1 173780444 - Exonic hg19 SKCM TCGA-FS-A1ZD-06A 16 12 CDS-5'UTR Intra-chr q32.2 q25.1 Seq+ 59771 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD55-NEK2 CD55 chr1 207512762 - NEK2 chr1 211836994 - Exonic hg19 SKCM TCGA-D9-A1JW-06A 3 3 In-Frame Intra-chr q32.2 q32.3 Other:NEK Seq+ 59772 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD55-PLD5 CD55 chr1 207512762 - PLD5 chr1 242383417 - Exonic hg19 SKCM TCGA-ER-A19T-01A 17 14 In-Frame Intra-chr q32.2 q43 Seq+ 59773 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD55-RGS21 CD55 chr1 207512762 - RGS21 chr1 192335051 + Exonic hg19 SARC TCGA-DX-A3LY-01B 28 20 Out-of-frame Intra-chr q32.2 q31.2 Seq+ 59774 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD59-FBXO3 CD59 chr11 33731752 - FBXO3 chr11 33780147 - Exonic hg19 BRCA TCGA-A7-A13D-01B 14 22 Out-of-frame Intra-chr p13 p13 Seq+ 59775 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD63-AARS CD63 chr12 56119252 - AARS chr16 70295060 - Exonic hg19 PRAD TCGA-EJ-5499-01A 2 4 3'UTR-CDS Inter-chr q13.2 q22.1 59776 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD63-ANKS1A CD63 chr12 56119232 - ANKS1A chr6 34977682 + Exonic hg19 UCEC TCGA-AJ-A3BG-01A 2 6 Out-of-frame Inter-chr q13.2 p21.31 59777 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD63-EIF2AK2 CD63 chr12 56119232 - EIF2AK2 chr2 37342384 - Exonic hg19 LUAD TCGA-86-7954-01A 2 3 Out-of-frame Inter-chr q13.2 p22.2 59778 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD63-OS9 CD63 chr12 56119597 - OS9 chr12 58109543 + Exonic hg19 BLCA TCGA-4Z-AA7S-01A 482 297 In-Frame Intra-chr q13.2 q13.3 Seq+ 59779 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD63-PLAT CD63 chr12 56119254 - PLAT chr8 42051245 - Exonic hg19 KIRC TCGA-BP-5199-01A 2 5 Out-of-frame Inter-chr q13.2 p11.21 59780 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD74-CD40 CD74 chr5 149781200 - CD40 chr20 44754189 + Exonic hg19 BLCA TCGA-XF-A9T5-01A 2 8 3'UTR-CDS Inter-chr q33.1 q13.12 59781 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD74-CXCR5 CD74 chr5 149781200 - CXCR5 chr11 118754475 + Exonic hg19 DLBC TCGA-FA-A82F-01A 2 7 3'UTR-5'UTR Inter-chr q33.1 q23.3 59782 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD74-DDX27 CD74 chr5 149781200 - DDX27 chr20 47849303 + Exonic hg19 CHOL TCGA-W5-AA2H-01A 2 11 3'UTR-CDS Inter-chr q33.1 q13.13 59783 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD74-ERBB3 CD74 chr5 149781200 - ERBB3 chr12 56492035 + Exonic hg19 UCEC TCGA-DF-A2KR-01A 2 8 3'UTR-3'UTR Inter-chr q33.1 q13.2 Oncogene 59784 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD74-IQCE CD74 chr5 149781200 - IQCE chr7 2641075 + Exonic hg19 LGG TCGA-HT-7854-01A 2 2 3'UTR-CDS Inter-chr q33.1 p22.3 59785 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD74-NDUFV1 CD74 chr5 149781200 - NDUFV1 chr11 67375697 + Exonic hg19 UCS TCGA-N9-A4Q7-01A 2 13 3'UTR-CDS Inter-chr q33.1 q13.2 59786 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD74-ROS1 CD74 chr5 149784243 - ROS1 chr6 117645578 - Exonic hg19 LUAD TCGA-64-1680-01A 175 161 In-Frame Inter-chr q33.1 q22.1 Oncogene KB Pub Seq+ 59787 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD74-ROS1 CD74 chr5 149784243 - ROS1 chr6 117645578 - Exonic hg19 LUAD TCGA-86-8278-01A 203 245 In-Frame Inter-chr q33.1 q22.1 Oncogene KB Pub Seq+ 59788 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD74-SUPT16H CD74 chr5 149781200 - SUPT16H chr14 21829491 - Exonic hg19 THCA TCGA-ET-A40S-01A 2 7 3'UTR-CDS Inter-chr q33.1 q11.2 59789 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD74-SUPT16H CD74 chr5 149781200 - SUPT16H chr14 21829491 - Exonic hg19 DLBC TCGA-GR-A4D5-01A 2 10 3'UTR-CDS Inter-chr q33.1 q11.2 59790 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD74-THSD4 CD74 chr5 149781200 - THSD4 chr15 72072881 + Exonic hg19 LIHC TCGA-DD-A4NA-01A 2 1 3'UTR-3'UTR Inter-chr q33.1 q23 59791 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD74-UTRN CD74 chr5 149781200 - UTRN chr6 144665237 + Exonic hg19 LGG TCGA-DB-5276-01A 2 2 3'UTR-CDS Inter-chr q33.1 q24.2 59792 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD80-WDR52 CD80 chr3 119276476 - WDR52 chr3 113152516 - Exonic hg19 DLBC TCGA-FF-A7CQ-01A 7 3 CDS-5'UTR Intra-chr q13.33 Seq+ 59793 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD81-ARMC3 CD81 chr11 2398845 - ARMC3 chr10 23321790 + Exonic hg19 UCS TCGA-NA-A5I1-01A 57 54 Out-of-frame Inter-chr p15.5 p12.2 Seq+ 59794 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD81-DNM1L CD81 chr11 2418627 - DNM1L chr12 32905677 + Exonic hg19 SKCM TCGA-FS-A1YY-06A 2 27 Out-of-frame Inter-chr p15.5 p11.21 59795 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD81-NDUFV1 CD81 chr11 2418627 - NDUFV1 chr11 67375697 + Exonic hg19 READ TCGA-AG-3725-01A 2 15 Out-of-frame Intra-chr p15.5 q13.2 59796 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD81-SUPT16H CD81 chr11 2418627 - SUPT16H chr14 21829491 - Exonic hg19 LGG TCGA-FG-5963-02A 2 13 Out-of-frame Inter-chr p15.5 q11.2 59797 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD81-SURF4 CD81 chr11 2418627 - SURF4 chr9 136239529 - Exonic hg19 PRAD TCGA-HC-7747-01A 2 10 Out-of-frame Inter-chr p15.5 59798 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD81-TYK2 CD81 chr11 2418627 - TYK2 chr19 10491352 - Exonic hg19 THYM TCGA-ZB-A96E-01A 2 2 Out-of-frame Inter-chr p15.5 p13.2 TK:JakA 59799 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD83-EHF CD83 chr6 14118296 - EHF chr11 34664175 + Exonic hg19 SARC TCGA-SI-A71Q-01A 4 7 In-Frame Inter-chr p23 p13 Tumor suppressor gene Transcription factor Seq+ 59800 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD83-LAMA2 CD83 chr6 14118296 - LAMA2 chr6 129663488 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 5 3 In-Frame Intra-chr p23 q22.33 Seq+ 59801 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD9-IQCE CD9 chr12 6347427 - IQCE chr7 2641075 + Exonic hg19 HNSC TCGA-HD-7229-01A 2 10 3'UTR-CDS Inter-chr p13.31 p22.3 59802 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD9-PPP3CA CD9 chr12 6347425 - PPP3CA chr4 102269435 - Exonic hg19 PRAD TCGA-KK-A6E1-01A 2 1 Out-of-frame Inter-chr p13.31 q24 59803 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD97-EPS15L1 CD97 chr19 14492357 - EPS15L1 chr19 16528448 - Exonic hg19 STAD TCGA-CG-4449-01A 18 6 Out-of-frame Intra-chr p13.11 59804 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD99L2-ARHGAP36 CD99L2 chrX 149999704 - ARHGAP36 chrX 130215734 + Exonic hg19 BRCA TCGA-GI-A2C9-01A 5 5 Out-of-frame Intra-chr q28 q26.1 Seq+ 59805 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CD99L2-CXorf66 CD99L2 chrX 150066995 - CXorf66 chrX 139040376 - Exonic hg19 BRCA TCGA-S3-A6ZF-01A 24 17 In-Frame Intra-chr q28 q27.1 Seq+ 59806 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC123-HK1 CDC123 chr10 12240775 - HK1 chr10 71136690 + Exonic hg19 MESO TCGA-SH-A7BD-01A 3 11 In-Frame Intra-chr p14 q22.1 Seq+ 59807 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC123-RAB18 CDC123 chr10 12252321 - RAB18 chr10 27798804 + Exonic hg19 STAD TCGA-BR-4253-01A 22 17 Out-of-frame Intra-chr p14 p12.1 Seq+ 59808 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC14A-DEFB135 CDC14A chr1 100921048 - DEFB135 chr8 11841930 + Exonic hg19 PRAD TCGA-V1-A9OH-01A 2 2 In-Frame Inter-chr p21.2 p23.1 59809 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC14B-AUH CDC14B chr9 99381501 - AUH chr9 94060358 - Exonic hg19 PRAD TCGA-XQ-A8TA-01A 46 45 In-Frame Intra-chr q22.33 q22.31 Seq+ 59810 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC20B-DHX29 CDC20B chr5 54468416 - DHX29 chr5 54552368 - Exonic hg19 OV TCGA-13-0893-01B 13 5 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 59811 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC23-CDC25C CDC23 chr5 137536796 - CDC25C chr5 137627805 - Exonic hg19 LUAD TCGA-44-4112-01A 2 2 In-Frame Intra-chr q31.2 q31.2 Seq+ 59812 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC25A-PRKAR2A CDC25A chr3 48215774 - PRKAR2A chr3 48820525 - Exonic hg19 OV TCGA-36-1575-01A 2 8 In-Frame Intra-chr p21.31 p21.31 Seq+ 59813 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC25A-RBM6 CDC25A chr3 48224419 - RBM6 chr3 50085678 + Exonic hg19 SKCM TCGA-D3-A2JG-06A 10 2 In-Frame Intra-chr p21.31 p21.31 Tumor suppressor gene Seq+ 59814 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC25A-SLC26A6 CDC25A chr3 48229268 - SLC26A6 chr3 48667144 - Exonic hg19 UCEC TCGA-D1-A3JQ-01A 16 11 In-Frame Intra-chr p21.31 p21.31 Seq+ 59815 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC25A-SPINK8 CDC25A chr3 48205797 - SPINK8 chr3 48351436 - Exonic hg19 LUSC TCGA-66-2756-01A 39 10 In-Frame Intra-chr p21.31 p21.31 Seq+ 59816 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC27-BRAF CDC27 chr17 45206759 - BRAF chr7 140487384 - Exonic hg19 SKCM TCGA-FS-A1ZU-06A 21 14 In-Frame Inter-chr q21.32 q34 TKL:RAF Oncogene Seq+ 59817 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC27-CCT6B CDC27 chr17 45266512 - CCT6B chr17 33281618 - Exonic hg19 ESCA TCGA-V5-A7RE-01A 18 13 In-Frame Intra-chr q21.32 q12 Seq+ 59818 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC27-MYL4 CDC27 chr17 45266512 - MYL4 chr17 45286755 + Exonic hg19 PRAD TCGA-HC-7213-01A 140 42 CDS-5'UTR Intra-chr q21.32 q21.32 Seq+ 59819 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC27-SNF8 CDC27 chr17 45266512 - SNF8 chr17 47018424 - Exonic hg19 LIHC TCGA-KR-A7K8-01A 32 20 In-Frame Intra-chr q21.32 q21.32 Seq+ 59820 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC27-ST7L CDC27 chr17 45266512 - ST7L chr1 113143470 - Exonic hg19 BRCA TCGA-A1-A0SH-01A 37 10 Out-of-frame Inter-chr q21.32 p13.2 Seq+ 59821 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC27-SYT13 CDC27 chr17 45266512 - SYT13 chr11 45277442 - Exonic hg19 STAD TCGA-FP-8631-01A 8 2 In-Frame Inter-chr q21.32 p11.2 Tumor suppressor gene Seq+ 59822 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC27-USP32 CDC27 chr17 45234596 - USP32 chr17 58379065 - Exonic hg19 BRCA TCGA-E9-A228-01A 7 4 In-Frame Intra-chr q21.32 q23.2 Seq+ 59823 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC37-ELL CDC37 chr19 10514054 - ELL chr19 18583692 - Exonic hg19 LUAD TCGA-05-4426-01A 5 7 In-Frame Intra-chr p13.2 p13.11 Seq+ 59824 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC37L1-BNC2 CDC37L1 chr9 4688606 - BNC2 chr9 16738483 - Exonic hg19 SKCM TCGA-GN-A4U5-01A 2 1 Out-of-frame Intra-chr p24.1 p22.2 Transcription factor 59825 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC42BPA-ATP6V1G3 CDC42BPA chr1 227441765 - ATP6V1G3 chr1 198492694 - Exonic hg19 LGG TCGA-TM-A84I-01A 2 1 In-Frame Intra-chr q42.13 q31.3 59826 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC42BPA-C5 CDC42BPA chr1 227504706 - C5 chr9 123780130 - Exonic hg19 LUAD TCGA-05-4427-01A 3 3 Out-of-frame Inter-chr q42.13 q33.2 Seq+ 59827 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC42BPA-EPRS CDC42BPA chr1 227203781 - EPRS chr1 220180680 - Exonic hg19 BRCA TCGA-E2-A1LK-01A 6 4 In-Frame Intra-chr q42.13 q41 Seq+ 59828 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC42BPA-PRKG1 CDC42BPA chr1 227268594 - PRKG1 chr10 52912924 + Exonic hg19 HNSC TCGA-CV-7407-01A 3 1 In-Frame Inter-chr q42.13 q11.23 Seq+ 59829 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC42BPA-WWOX CDC42BPA chr1 227504706 - WWOX chr16 79245505 + Exonic hg19 BLCA TCGA-FD-A6TC-01A 5 7 Out-of-frame Inter-chr q42.13 q23.1 Tumor suppressor gene Seq+ 59830 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC42BPA-ZNF678 CDC42BPA chr1 227504706 - ZNF678 chr1 227770215 + Exonic hg19 PRAD TCGA-EJ-5499-01A 2 1 Out-of-frame Intra-chr q42.13 q42.13 Transcription factor Seq+ 59831 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC42BPB-C14orf182 CDC42BPB chr14 103523336 - C14orf182 chr14 50459591 - Exonic hg19 LUAD TCGA-MP-A4T6-01A 6 4 Out-of-frame Intra-chr q32.32 Seq+ 59832 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC42BPB-KIAA1409 CDC42BPB chr14 103523336 - KIAA1409 chr14 93934017 + Exonic hg19 BRCA TCGA-A1-A0SO-01A 6 4 Out-of-frame Intra-chr q32.32 59833 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC42BPB-RGS6 CDC42BPB chr14 103449893 - RGS6 chr14 73029125 + Exonic hg19 SKCM TCGA-FW-A5DX-01A 5 3 In-Frame Intra-chr q32.32 q24.2 Seq+ 59834 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC42BPB-SMEK1 CDC42BPB chr14 103470265 - SMEK1 chr14 91927951 - Exonic hg19 HNSC TCGA-CN-4735-01A 19 13 Out-of-frame Intra-chr q32.32 Seq+ 59835 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC42BPB-SYNJ2BP CDC42BPB chr14 103414058 - SYNJ2BP chr14 70842488 - Exonic hg19 OV TCGA-04-1365-01A 6 2 In-Frame Intra-chr q32.32 q24.2 Seq+ 59836 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC42BPB-ZFYVE1 CDC42BPB chr14 103452824 - ZFYVE1 chr14 73465023 - Exonic hg19 LUSC TCGA-NC-A5HI-01A 20 16 In-Frame Intra-chr q32.32 q24.2 Seq+ 59837 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC42BPG-EHD1 CDC42BPG chr11 64611882 - EHD1 chr11 64627808 - Exonic hg19 BLCA TCGA-2F-A9KT-01A 5 5 In-Frame Intra-chr q13.1 q13.1 Seq+ 59838 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC42EP2-MRPL49 CDC42EP2 chr11 65082425 - MRPL49 chr11 64892960 + Exonic hg19 CESC TCGA-VS-A8EC-01A 12 9 5'UTR-5'UTR Intra-chr q13.1 q13.1 Seq+ 59839 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC42EP3-GXYLT2 CDC42EP3 chr2 37898569 - GXYLT2 chr3 72957518 + Exonic hg19 PRAD TCGA-YL-A8SP-01B 2 1 5'UTR-CDS Inter-chr p22.2 p13 59840 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC42EP4-AMZ2 CDC42EP4 chr17 71308032 - AMZ2 chr17 66244781 + Exonic hg19 STAD TCGA-D7-6820-01A 7 238 5'UTR-5'UTR Intra-chr q25.1 q24.2 Seq+ 59841 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC42EP4-COMMD1 CDC42EP4 chr17 71308032 - COMMD1 chr2 62227836 + Exonic hg19 UCEC TCGA-DF-A2KR-01A 41 21 5'UTR-CDS Inter-chr q25.1 p15 Seq+ 59842 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC42EP4-NEUROD2 CDC42EP4 chr17 71308032 - NEUROD2 chr17 37762857 - Exonic hg19 BRCA TCGA-A8-A0AD-01A 2 3 5'UTR-5'UTR Intra-chr q25.1 q12 Transcription factor Seq+ 59843 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC42EP4-SDK2 CDC42EP4 chr17 71308032 - SDK2 chr17 71348776 - Exonic hg19 LUSC TCGA-43-8115-01A 6 7 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 59844 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC42EP4-SDK2 CDC42EP4 chr17 71308032 - SDK2 chr17 71361534 - Exonic hg19 BRCA TCGA-A2-A0YE-01A 55 31 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 59845 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC42EP4-SDK2 CDC42EP4 chr17 71308032 - SDK2 chr17 71348776 - Exonic hg19 BRCA TCGA-AN-A04A-01A 9 14 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 59846 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC42EP4-SDK2 CDC42EP4 chr17 71308032 - SDK2 chr17 71335079 - Exonic hg19 HNSC TCGA-CV-A460-01A 29 25 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 59847 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC42EP4-SEPT10 CDC42EP4 chr17 71308032 - SEPT10 chr2 110350696 - Exonic hg19 LUSC TCGA-66-2782-01A 24 6 5'UTR-CDS Inter-chr q25.1 q13 Seq+ 59848 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC42EP5-CYTH1 CDC42EP5 chr19 54982766 - CYTH1 chr17 76705814 - Exonic hg19 BRCA TCGA-AC-A5XU-01A 2 4 5'UTR-CDS Inter-chr q25.3 Seq+ 59849 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC42SE1-TNKS CDC42SE1 chr1 151031955 - TNKS chr8 9619026 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 77 36 5'UTR-CDS Inter-chr q21.3 p23.1 Seq+ 59850 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC5L-MLIP CDC5L chr6 44397647 - MLIP chr6 54122106 + Exonic hg19 SKCM TCGA-WE-A8K4-01A 6 5 5'UTR-CDS Intra-chr p21.1 Transcription factor p12.1 Seq+ 59851 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC5L-PITPNC1 CDC5L chr6 44397647 - PITPNC1 chr17 65528918 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 57 29 5'UTR-CDS Inter-chr p21.1 Transcription factor q24.2 Seq+ 59852 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC5L-SPATS1 CDC5L chr6 44387334 - SPATS1 chr6 44344095 + Exonic hg19 BRCA TCGA-C8-A12L-01A 16 12 5'UTR-CDS Intra-chr p21.1 Transcription factor p21.1 Seq+ 59853 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC5L-TMEM63B CDC5L chr6 44376369 - TMEM63B chr6 44102298 + Exonic hg19 BLCA TCGA-GC-A3RB-01A 46 29 5'UTR-5'UTR Intra-chr p21.1 Transcription factor p21.1 Seq+ 59854 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC6-JUP CDC6 chr17 38457860 - JUP chr17 39914036 - Exonic hg19 STAD TCGA-EQ-8122-01A 148 929 3'UTR-CDS Intra-chr q21.2 q21.2 Tumor suppressor gene Seq+ 59855 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC6-RNFT1 CDC6 chr17 38457282 - RNFT1 chr17 58040645 - Exonic hg19 BRCA TCGA-E2-A15H-01A 9 12 3'UTR-CDS Intra-chr q21.2 q23.1 Seq+ 59856 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC6-SRCIN1 CDC6 chr17 38453019 - SRCIN1 chr17 36735044 - Exonic hg19 READ TCGA-EI-6509-01A 2 1 3'UTR-CDS Intra-chr q21.2 q12 59857 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC73-FAM172A CDC73 chr1 193121574 - FAM172A chr5 92956835 - Exonic hg19 LAML TCGA-AB-2939-03A 13 7 Out-of-frame Inter-chr q31.2 Oncogene Tumor suppressor gene q15 Tumor suppressor gene Seq+ 59858 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC73-SWT1 CDC73 chr1 193205486 - SWT1 chr1 185153375 + Exonic hg19 SARC TCGA-DX-A23R-01A 16 11 In-Frame Intra-chr q31.2 Oncogene Tumor suppressor gene q25.3 Seq+ 59859 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDC73-TROVE2 CDC73 chr1 193121574 - TROVE2 chr1 193060781 + Exonic hg19 LIHC TCGA-BC-A10T-01A 2 3 In-Frame Intra-chr q31.2 Oncogene Tumor suppressor gene q31.2 Seq+ 59860 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDCA2-ADAM28 CDCA2 chr8 25361060 - ADAM28 chr8 24167407 + Exonic hg19 BRCA TCGA-LL-A440-01A 4 2 Out-of-frame Intra-chr p21.2 p21.2 Seq+ 59861 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDCA2-FRMPD4 CDCA2 chr8 25327496 - FRMPD4 chrX 12725588 + Exonic hg19 CESC TCGA-VS-A8EK-01A 4 1 Out-of-frame Inter-chr p21.2 p22.2 59862 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDCA4-C14orf79 CDCA4 chr14 105477497 - C14orf79 chr14 105455280 + Exonic hg19 LUSC TCGA-98-A538-01A 15 2 3'UTR-CDS Intra-chr q32.33 q32.33 59863 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDCA7L-PASD1 CDCA7L chr7 21956372 - PASD1 chrX 150828185 + Exonic hg19 MESO TCGA-ZN-A9VP-01A 279 286 In-Frame Inter-chr p15.3 q28 Seq+ 59864 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDH1-CA1 CDH1 chr16 68772314 - CA1 chr8 86245849 - Exonic hg19 PRAD TCGA-G9-A9S7-01A 22 17 Out-of-frame Inter-chr q22.1 Oncogene Tumor suppressor gene q21.2 Seq+ 59865 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDH1-CCDC132 CDH1 chr16 68857529 - CCDC132 chr7 92952923 + Exonic hg19 BRCA TCGA-AO-A12E-01A 243 279 In-Frame Inter-chr q22.1 Oncogene Tumor suppressor gene Seq+ 59866 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDH1-CDKL3 CDH1 chr16 68856128 - CDKL3 chr5 133644157 - Exonic hg19 LUAD TCGA-05-4427-01A 42 21 Out-of-frame Inter-chr q22.1 Oncogene Tumor suppressor gene q31.1 CMGC:CDKL Seq+ 59867 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDH1-DEXI CDH1 chr16 68842751 - DEXI chr16 11023416 - Exonic hg19 BRCA TCGA-B6-A0RN-01A 59 112 CDS-3'UTR Intra-chr q22.1 Oncogene Tumor suppressor gene p13.13 Seq+ 59868 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDH1-NPFFR2 CDH1 chr16 68772314 - NPFFR2 chr4 73003757 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 14 15 In-Frame Inter-chr q22.1 Oncogene Tumor suppressor gene q13.3 Seq+ 59869 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDH1-TRHDE CDH1 chr16 68835796 - TRHDE chr12 72771775 + Exonic hg19 PRAD TCGA-VP-A879-01A 10 4 In-Frame Inter-chr q22.1 Oncogene Tumor suppressor gene q21.1 Seq+ 59870 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDH11-KIFC3 CDH11 chr16 64982512 - KIFC3 chr16 57795448 - Exonic hg19 SKCM TCGA-EE-A2MN-06A 18 9 Out-of-frame Intra-chr q21 Oncogene Tumor suppressor gene q21 Seq+ 59871 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDH11-PRC1 CDH11 chr16 65005482 - PRC1 chr15 91512853 - Exonic hg19 BRCA TCGA-A2-A4S1-01A 206 135 Out-of-frame Inter-chr q21 Oncogene Tumor suppressor gene q26.1 Seq+ 59872 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDH12-BNIP3L CDH12 chr5 22505379 - BNIP3L chr8 26362823 + Exonic hg19 ACC TCGA-OR-A5KX-01A 5 3 5'UTR-3'UTR Inter-chr p14.3 p21.2 Tumor suppressor gene Seq+ 59873 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDH12-ZDHHC11 CDH12 chr5 22212607 - ZDHHC11 chr5 825366 - Exonic hg19 SARC TCGA-DX-A1L2-01A 2 3 5'UTR-CDS Intra-chr p14.3 p15.33 59874 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDH13-TXNDC11 CDH13 chr16 82660742 - TXNDC11 chr16 11792181 - Exonic hg19 CESC TCGA-VS-A953-01A 31 23 In-Frame Intra-chr q23.3 Tumor suppressor gene p13.13 Seq+ 59875 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDH17-RAD54B CDH17 chr8 95160972 - RAD54B chr8 95423543 - Exonic hg19 CHOL TCGA-W5-AA38-01A 15 3 In-Frame Intra-chr q22.1 Tumor suppressor gene q22.1 59876 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDH18-RP11-362K2.2 CDH18 chr5 19981169 - RP11-362K2.2 chr12 59206196 + Exonic hg19 SARC TCGA-DX-A1L3-01A 64 25 Out-of-frame Inter-chr p14.3 59877 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDH18-TERT CDH18 chr5 19612543 - TERT chr5 1282739 - Exonic hg19 SARC TCGA-DX-AB2G-01A 4 4 In-Frame Intra-chr p14.3 p15.33 Oncogene Seq+ 59878 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDH2-EPB41L3 CDH2 chr18 25727637 - EPB41L3 chr18 5489193 - Exonic hg19 SARC TCGA-MJ-A68H-01A 34 15 CDS-5'UTR Intra-chr q12.1 Oncogene p11.31 Tumor suppressor gene Seq+ 59879 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDH2-KIAA1328 CDH2 chr18 25727637 - KIAA1328 chr18 34646853 + Exonic hg19 BRCA TCGA-AC-A2QH-01B 19 7 Out-of-frame Intra-chr q12.1 Oncogene q12.2 Seq+ 59880 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDH2-LAMA3 CDH2 chr18 25727637 - LAMA3 chr18 21394367 + Exonic hg19 LUAD TCGA-44-7669-01A 38 14 Out-of-frame Intra-chr q12.1 Oncogene q11.2 Seq+ 59881 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDH23-NSD1 CDH23 chr10 73501678 - NSD1 chr5 176618885 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 8 4 In-Frame Inter-chr q22.1 q35.3 Oncogene Seq+ 59882 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDH3-C16orf70 CDH3 chr16 68679653 - C16orf70 chr16 67154015 + Exonic hg19 ESCA TCGA-L5-A4OS-01A 7 4 In-Frame Intra-chr q22.1 q22.1 Seq+ 59883 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDH3-CHKA CDH3 chr16 68718727 - CHKA chr11 67836404 - Exonic hg19 BLCA TCGA-DK-A6AV-01A 311 168 In-Frame Inter-chr q22.1 q13.2 Seq+ 59884 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDH4-FGF16 CDH4 chr20 60470103 - FGF16 chrX 76709648 + Exonic hg19 SARC TCGA-DX-AB2F-01A 5 1 Out-of-frame Inter-chr q13.33 Tumor suppressor gene q21.1 59885 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDH4-NLRP9 CDH4 chr20 60348238 - NLRP9 chr19 56244916 - Exonic hg19 BRCA TCGA-EW-A1PA-01A 2 1 Out-of-frame Inter-chr q13.33 Tumor suppressor gene q13.42 59886 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDH4-SLA2 CDH4 chr20 60448956 - SLA2 chr20 35262992 - Exonic hg19 BRCA TCGA-AC-A62V-01A 4 5 Out-of-frame Intra-chr q13.33 Tumor suppressor gene q11.23 Seq+ 59887 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDH8-RFX1 CDH8 chr16 61935083 - RFX1 chr19 14083939 - Exonic hg19 CESC TCGA-DS-A5RQ-01A 2 3 Out-of-frame Inter-chr q21 p13.12 Transcription factor Seq+ 59888 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDIPT-SEZ6L2 CDIPT chr16 29871902 - SEZ6L2 chr16 29885050 - Exonic hg19 ESCA TCGA-LN-A8I0-01A 2 11 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 59889 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK1-NRG1 CDK1 chr10 62539960 - NRG1 chr8 32585467 + Exonic hg19 BLCA TCGA-FD-A5BR-01A 2 2 In-Frame Inter-chr q21.2 p12 59890 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK10-C16orf55 CDK10 chr16 89758924 - C16orf55 chr16 89735694 + Exonic hg19 LUAD TCGA-78-7150-01A 39 21 Out-of-frame Intra-chr q24.3 CMGC:CDK Seq+ 59891 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK10-SPG7 CDK10 chr16 89753167 - SPG7 chr16 89611056 + Exonic hg19 LUAD TCGA-55-A48Y-01A 8 5 Out-of-frame Intra-chr q24.3 CMGC:CDK q24.3 Seq+ 59892 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK12-AC103810.1 CDK12 chr17 37619370 - AC103810.1 chr17 62825367 - Exonic hg19 BRCA TCGA-3C-AALI-01A 9 11 Out-of-frame Intra-chr q12 Oncogene q24.1 59893 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK12-AKAP1 CDK12 chr17 37628016 - AKAP1 chr17 55187386 + Exonic hg19 BRCA TCGA-C8-A12M-01A 10 14 Out-of-frame Intra-chr q12 Oncogene q22 Seq+ 59894 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK12-CACNB1 CDK12 chr17 37646986 - CACNB1 chr17 37347846 - Exonic hg19 COAD TCGA-AA-A02K-01A 16 10 Out-of-frame Intra-chr q12 Oncogene q12 Seq+ 59895 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK12-FAM20A CDK12 chr17 37628016 - FAM20A chr17 66551884 - Exonic hg19 BRCA TCGA-3C-AALI-01A 19 9 In-Frame Intra-chr q12 Oncogene q24.2 Seq+ 59896 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK12-FBXL20 CDK12 chr17 37628016 - FBXL20 chr17 37439108 - Exonic hg19 BRCA TCGA-AO-A0JM-01A 12 2 In-Frame Intra-chr q12 Oncogene q12 Seq+ 59897 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK12-IKZF3 CDK12 chr17 37657692 - IKZF3 chr17 37988404 - Exonic hg19 BLCA TCGA-ZF-AA4T-01A 48 48 Out-of-frame Intra-chr q12 Oncogene q21.1 Tumor suppressor gene Transcription factor Seq+ 59898 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK12-JAK2 CDK12 chr17 37628016 - JAK2 chr9 5126333 + Exonic hg19 BRCA TCGA-EW-A6S9-01A 25 43 Out-of-frame Inter-chr q12 Oncogene p24.1 TK:JakA Oncogene Seq+ 59899 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK12-MED1 CDK12 chr17 37619370 - MED1 chr17 37571592 - Exonic hg19 PRAD TCGA-EJ-5525-01A 3 2 Out-of-frame Intra-chr q12 Oncogene q12 Tumor suppressor gene 59900 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK12-PLXDC1 CDK12 chr17 37619370 - PLXDC1 chr17 37265644 - Exonic hg19 BLCA TCGA-ZF-AA4T-01A 9 5 Out-of-frame Intra-chr q12 Oncogene q12 Seq+ 59901 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK12-SMG6 CDK12 chr17 37657692 - SMG6 chr17 1985250 - Exonic hg19 OV TCGA-09-1673-01A 7 2 Out-of-frame Intra-chr q12 Oncogene p13.3 Seq+ 59902 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK12-TAF15 CDK12 chr17 37682569 - TAF15 chr17 34169371 + Exonic hg19 BLCA TCGA-UY-A9PD-01A 20 18 In-Frame Intra-chr q12 Oncogene q12 Seq+ 59903 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK13-ADCY1 CDK13 chr7 39991451 - ADCY1 chr7 45649978 + Exonic hg19 SARC TCGA-DX-A8BJ-01A 2 1 Out-of-frame Intra-chr p14.1 p12.3 59904 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK13-C7orf36 CDK13 chr7 40041630 - C7orf36 chr7 39610105 + Exonic hg19 SKCM TCGA-3N-A9WC-06A 3 2 Out-of-frame Intra-chr p14.1 59905 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK13-C7orf36 CDK13 chr7 39991451 - C7orf36 chr7 39649216 + Exonic hg19 BRCA TCGA-JL-A3YW-01A 2 2 Out-of-frame Intra-chr p14.1 59906 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK13-DDX56 CDK13 chr7 40041630 - DDX56 chr7 44609727 - Exonic hg19 BLCA TCGA-ZF-AA5H-01A 37 30 Out-of-frame Intra-chr p14.1 p13 Seq+ 59907 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK13-RALA CDK13 chr7 40041630 - RALA chr7 39745722 + Exonic hg19 COAD TCGA-5M-AATA-01A 9 4 Out-of-frame Intra-chr p14.1 p14.1 Seq+ 59908 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK13-TAX1BP1 CDK13 chr7 40041630 - TAX1BP1 chr7 27867357 + Exonic hg19 BRCA TCGA-E2-A105-01A 14 15 Out-of-frame Intra-chr p14.1 p15.2 Seq+ 59909 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK14-DLD CDK14 chr7 90233563 - DLD chr7 107542183 + Exonic hg19 PRAD TCGA-EJ-5519-01A 26 11 5'UTR-CDS Intra-chr q21.13 q31.1 Seq+ 59910 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK14-EBF1 CDK14 chr7 90123744 - EBF1 chr5 158126150 - Exonic hg19 SARC TCGA-FX-A2QS-01A 5 5 5'UTR-CDS Inter-chr q21.13 q33.3 Transcription factor 59911 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK14-ORC5 CDK14 chr7 90233563 - ORC5 chr7 103844682 - Exonic hg19 HNSC TCGA-DQ-7589-01A 10 1 5'UTR-CDS Intra-chr q21.13 q22.2 Seq+ 59912 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK14-SAV1 CDK14 chr7 90675275 - SAV1 chr14 51111732 - Exonic hg19 MESO TCGA-TS-A8AF-01A 2 1 In-Frame Inter-chr q21.13 q22.1 Seq+ 59913 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK14-TFEC CDK14 chr7 90528668 - TFEC chr7 115624567 - Exonic hg19 SKCM TCGA-EE-A20I-06A 15 3 CDS-5'UTR Intra-chr q21.13 q31.2 Transcription factor Seq+ 59914 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK17-C12orf63 CDK17 chr12 96728497 - C12orf63 chr12 96906764 + Exonic hg19 STAD TCGA-BR-8679-01A 168 432 Out-of-frame Intra-chr q23.1 59915 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK17-USP30 CDK17 chr12 96704830 - USP30 chr12 109505329 + Exonic hg19 SARC TCGA-DX-AB36-01A 2 2 Out-of-frame Intra-chr q23.1 q24.11 Seq+ 59916 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK18-CNTN2 CDK18 chr1 205473924 - CNTN2 chr1 205027049 + Exonic hg19 SKCM TCGA-D3-A2J6-06A 6 1 5'UTR-CDS Intra-chr q32.1 q32.1 Seq+ 59917 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK19-ZFAND3 CDK19 chr6 111136212 - ZFAND3 chr6 38120011 + Exonic hg19 BRCA TCGA-AR-A24Z-01A 10 5 Out-of-frame Intra-chr q21 p21.2 Seq+ 59918 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK2-PAN2 CDK2 chr12 56363360 - PAN2 chr12 56719238 - Exonic hg19 SARC TCGA-DX-A3LW-01A 5 7 In-Frame Intra-chr q13.2 CMGC:CDK Tumor suppressor gene q13.3 Seq+ 59919 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK2-UBE3A CDK2 chr12 56366568 - UBE3A chr15 25657118 - Exonic hg19 SKCM TCGA-EE-A2ML-06A 2 3 3'UTR-5'UTR Inter-chr q13.2 CMGC:CDK Tumor suppressor gene q11.2 59920 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK2AP1-RILPL1 CDK2AP1 chr12 123756111 - RILPL1 chr12 123957229 - Exonic hg19 STAD TCGA-BR-A4QI-01A 4 23 Out-of-frame Intra-chr q24.31 Tumor suppressor gene q24.31 Seq+ 59921 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK5RAP2-ENG CDK5RAP2 chr9 123280705 - ENG chr9 130588951 - Exonic hg19 BRCA TCGA-E2-A14N-01A 4 3 In-Frame Intra-chr q33.2 q34.11 Seq+ 59922 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK5RAP2-GRIN1 CDK5RAP2 chr9 123280705 - GRIN1 chr9 140036465 + Exonic hg19 LGG TCGA-HT-7873-01B 7 3 In-Frame Intra-chr q33.2 q34.3 Seq+ 59923 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK5RAP2-MEGF9 CDK5RAP2 chr9 123330599 - MEGF9 chr9 123367919 - Exonic hg19 LGG TCGA-E1-A7Z2-01A 3 3 Out-of-frame Intra-chr q33.2 q33.2 59924 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK5RAP3-RNF43 CDK5RAP3 chr17 46051814 - RNF43 chr17 56448394 - Exonic hg19 BRCA TCGA-C8-A27A-01A 10 5 Out-of-frame Intra-chr q21.32 q22 Oncogene Seq+ 59925 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK5RAP3-SP2 CDK5RAP3 chr17 46055276 - SP2 chr17 46002285 + Exonic hg19 STAD TCGA-VQ-A92D-01A 2 59 In-Frame Intra-chr q21.32 q21.32 Transcription factor Seq+ 59926 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK6-ANKIB1 CDK6 chr7 92404010 - ANKIB1 chr7 91924203 + Exonic hg19 PAAD TCGA-IB-A5SO-01A 2 1 CDS-5'UTR Intra-chr q21.2 CMGC:CDK Oncogene Tumor suppressor gene q21.2 Seq+ 59927 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK6-ANKIB1 CDK6 chr7 92462405 - ANKIB1 chr7 91936673 + Exonic hg19 STAD TCGA-RD-A8N6-01A 13 79 In-Frame Intra-chr q21.2 CMGC:CDK Oncogene Tumor suppressor gene q21.2 Seq+ 59928 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK6-HEPACAM2 CDK6 chr7 92404010 - HEPACAM2 chr7 92821676 - Exonic hg19 BLCA TCGA-G2-A2EF-01A 137 86 In-Frame Intra-chr q21.2 CMGC:CDK Oncogene Tumor suppressor gene q21.2 Seq+ 59929 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK6-STXBP6 CDK6 chr7 92462405 - STXBP6 chr14 25281938 - Exonic hg19 LUAD TCGA-44-7670-01A 17 10 Out-of-frame Inter-chr q21.2 CMGC:CDK Oncogene Tumor suppressor gene q12 Seq+ 59930 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK7-CCNB1 CDK7 chr5 68531280 - CCNB1 chr5 68463735 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 31 1 In-Frame Intra-chr CMGC:CDK q13.2 Seq+ 59931 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK7-RGS20 CDK7 chr5 68531280 - RGS20 chr8 54866636 + Exonic hg19 BRCA TCGA-C8-A26W-01A 2 4 Out-of-frame Inter-chr CMGC:CDK q11.23 Seq+ 59932 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK7-RIN3 CDK7 chr5 68531280 - RIN3 chr14 93107583 + Exonic hg19 PRAD TCGA-VN-A88K-01A 25 9 Out-of-frame Inter-chr CMGC:CDK q32.12 Seq+ 59933 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK7-SH3BGR CDK7 chr5 68531280 - SH3BGR chr21 40871749 + Exonic hg19 PRAD TCGA-ZG-A9NI-01A 7 3 In-Frame Inter-chr CMGC:CDK q22.2 Seq+ 59934 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK8-GCNT7 CDK8 chr13 26928017 - GCNT7 chr20 55070353 - Exonic hg19 SARC TCGA-SI-AA8B-01A 14 11 Out-of-frame Inter-chr q12.13 CMGC:CDK Oncogene q13.31 Seq+ 59935 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK8-GTF2F2 CDK8 chr13 26911779 - GTF2F2 chr13 45857577 + Exonic hg19 STAD TCGA-D7-8576-01A 2 11 In-Frame Intra-chr q12.13 CMGC:CDK Oncogene q14.12 Seq+ 59936 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDK8-IKZF3 CDK8 chr13 26828906 - IKZF3 chr17 37988404 - Exonic hg19 BRCA TCGA-A8-A07I-01A 15 10 Out-of-frame Inter-chr q12.13 CMGC:CDK Oncogene q21.1 Tumor suppressor gene Transcription factor Seq+ 59937 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKAL1-ASH1L CDKAL1 chr6 20846409 - ASH1L chr1 155349907 - Exonic hg19 LUSC TCGA-33-4587-01A 14 14 In-Frame Inter-chr p22.3 q22 Transcription factor Seq+ 59938 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKAL1-C6orf89 CDKAL1 chr6 20548936 - C6orf89 chr6 36862280 + Exonic hg19 LUAD TCGA-91-6847-01A 8 5 Out-of-frame Intra-chr p22.3 p21.2 Seq+ 59939 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKAL1-CLCN4 CDKAL1 chr6 20535625 - CLCN4 chrX 10153062 + Exonic hg19 LUSC TCGA-56-8307-01A 4 3 5'UTR-5'UTR Inter-chr p22.3 p22.2 Seq+ 59940 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKAL1-CRHR2 CDKAL1 chr6 21108694 - CRHR2 chr7 30695628 - Exonic hg19 LIHC TCGA-G3-A7M5-01A 6 1 In-Frame Inter-chr p22.3 p14.3 Seq+ 59941 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKAL1-DNAH8 CDKAL1 chr6 20535625 - DNAH8 chr6 38850686 + Exonic hg19 BLCA TCGA-DK-AA6U-01A 9 30 5'UTR-CDS Intra-chr p22.3 p21.2 Seq+ 59942 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKAL1-EXOC2 CDKAL1 chr6 20758874 - EXOC2 chr6 576882 - Exonic hg19 LGG TCGA-DH-A66G-01A 2 1 In-Frame Intra-chr p22.3 p25.3 59943 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKAL1-HSP90AA1 CDKAL1 chr6 20535625 - HSP90AA1 chr14 102568422 - Exonic hg19 BRCA TCGA-B6-A0RS-01A 2 1 5'UTR-CDS Inter-chr p22.3 q32.31 Oncogene Seq+ 59944 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKAL1-JARID2 CDKAL1 chr6 20548936 - JARID2 chr6 15487538 + Exonic hg19 SARC TCGA-DX-A48N-01A 5 1 In-Frame Intra-chr p22.3 p22.3 59945 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKAL1-KCNMB2 CDKAL1 chr6 20649608 - KCNMB2 chr3 178525131 + Exonic hg19 HNSC TCGA-BA-A4II-01A 4 1 CDS-5'UTR Inter-chr p22.3 q26.32 59946 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKAL1-LIG1 CDKAL1 chr6 20649608 - LIG1 chr19 48634428 - Exonic hg19 BLCA TCGA-ZF-A9RF-01A 8 3 Out-of-frame Inter-chr p22.3 q13.33 Tumor suppressor gene Seq+ 59947 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKAL1-RBM24 CDKAL1 chr6 20955816 - RBM24 chr6 17291987 + Exonic hg19 BRCA TCGA-B6-A0I6-01A 31 7 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 59948 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKAL1-RCAN2 CDKAL1 chr6 20781496 - RCAN2 chr6 46424715 - Exonic hg19 BLCA TCGA-GV-A3JZ-01A 5 1 CDS-5'UTR Intra-chr p22.3 p12.3 Seq+ 59949 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKAL1-RP1-139D8.6 CDKAL1 chr6 21000603 - RP1-139D8.6 chr6 42130658 + Exonic hg19 BLCA TCGA-XF-AAN7-01A 4 1 Out-of-frame Intra-chr p22.3 59950 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKAL1-TBC1D1 CDKAL1 chr6 20548936 - TBC1D1 chr4 38091553 + Exonic hg19 BLCA TCGA-GV-A3JZ-01A 3 3 In-Frame Inter-chr p22.3 p14 Seq+ 59951 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKL1-ATL1 CDKL1 chr14 50862419 - ATL1 chr14 51057659 + Exonic hg19 OV TCGA-09-1674-01A 2 1 In-Frame Intra-chr q22.1 CMGC:CDKL q22.1 59952 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKL2-CXCL11 CDKL2 chr4 76551005 - CXCL11 chr4 76957217 - Exonic hg19 LUAD TCGA-55-7914-01A 46 12 CDS-5'UTR Intra-chr q21.1 CMGC:CDKL q21.1 Seq+ 59953 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKL2-G3BP2 CDKL2 chr4 76551005 - G3BP2 chr4 76573925 - Exonic hg19 LUAD TCGA-38-4632-01A 5 2 In-Frame Intra-chr q21.1 CMGC:CDKL q21.1 Seq+ 59954 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKL3-SIL1 CDKL3 chr5 133706689 - SIL1 chr5 138463542 - Exonic hg19 SKCM TCGA-ER-A2NH-06A 3 23 5'UTR-5'UTR Intra-chr q31.1 CMGC:CDKL q31.2 Seq+ 59955 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKN2A-CAPZB CDKN2A chr9 21974677 - CAPZB chr1 19671746 - Exonic hg19 BLCA TCGA-E7-A6MD-01A 208 211 In-Frame Inter-chr p21.3 Oncogene Tumor suppressor gene p36.13 Seq+ 59956 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKN2A-EXD2 CDKN2A chr9 21974677 - EXD2 chr14 69695533 + Exonic hg19 BLCA TCGA-XF-AAMW-01A 5 4 In-Frame Inter-chr p21.3 Oncogene Tumor suppressor gene q24.1 Seq+ 59957 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKN2A-FASTKD3 CDKN2A chr9 21994138 - FASTKD3 chr5 7866096 - Exonic hg19 MESO TCGA-TS-A7P1-01A 5 4 In-Frame Inter-chr p21.3 Oncogene Tumor suppressor gene p15.31 Seq+ 59958 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKN2A-KIAA1797 CDKN2A chr9 21994138 - KIAA1797 chr9 20881870 + Exonic hg19 LUAD TCGA-44-7670-01A 11 2 Out-of-frame Intra-chr p21.3 Oncogene Tumor suppressor gene 59959 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKN2A-MGA CDKN2A chr9 21970901 - MGA chr15 42019378 + Exonic hg19 BLCA TCGA-GC-A3RD-01A 2 3 In-Frame Inter-chr p21.3 Oncogene Tumor suppressor gene q15.1 Transcription factor Seq+ 59960 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKN2A-MTAP CDKN2A chr9 21974677 - MTAP chr9 21815432 + Exonic hg19 HNSC TCGA-CQ-7063-01A 25 27 In-Frame Intra-chr p21.3 Oncogene Tumor suppressor gene p21.3 Tumor suppressor gene Seq+ 59961 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKN2A-MYH10 CDKN2A chr9 21994138 - MYH10 chr17 8508300 - Exonic hg19 SARC TCGA-SI-A71P-01A 7 12 Out-of-frame Inter-chr p21.3 Oncogene Tumor suppressor gene p13.1 Seq+ 59962 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKN2A-SOBP CDKN2A chr9 21994138 - SOBP chr6 107908284 + Exonic hg19 STAD TCGA-IN-A6RL-01A 4 3 Out-of-frame Inter-chr p21.3 Oncogene Tumor suppressor gene q21 59963 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKN2A-SRGAP2 CDKN2A chr9 21994138 - SRGAP2 chr1 206634382 + Exonic hg19 LUSC TCGA-60-2715-01A 62 59 Out-of-frame Inter-chr p21.3 Oncogene Tumor suppressor gene q32.1 Tumor suppressor gene Seq+ 59964 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKN2B-DGKD CDKN2B chr9 22008797 - DGKD chr2 234296903 + Exonic hg19 GBM TCGA-06-0155-01B 4 8 In-Frame Inter-chr p21.3 Oncogene Tumor suppressor gene 59965 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDKN3-SFTA3 CDKN3 chr14 54868297 - SFTA3 chr14 36960496 - Exonic hg19 LUAD TCGA-86-A4D0-01A 45 35 Out-of-frame Intra-chr q22.2 q13.3 Seq+ 59966 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDON-DCPS CDON chr11 125848199 - DCPS chr11 126215242 + Exonic hg19 UCEC TCGA-PG-A7D5-01A 17 13 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 59967 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDR2L-C17orf28 CDR2L chr17 72984217 - C17orf28 chr17 72960727 - Exonic hg19 READ TCGA-AG-3732-01A 11 5 Out-of-frame Intra-chr q25.1 Seq+ 59968 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDR2L-KSR1 CDR2L chr17 72984217 - KSR1 chr17 25810684 + Exonic hg19 LUSC TCGA-66-2800-01A 4 1 CDS-5'UTR Intra-chr q25.1 q11.2 TKL:RAF Seq+ 59969 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDR2L-MEF2D CDR2L chr17 72995711 - MEF2D chr1 156445029 - Exonic hg19 UCEC TCGA-EO-A3B1-01A 16 6 In-Frame Inter-chr q25.1 q22 Transcription factor 59970 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDS1-UGT1A10 CDS1 chr4 85530678 - UGT1A10 chr2 234675680 + Exonic hg19 BLCA TCGA-2F-A9KW-01A 37 21 In-Frame Inter-chr q21.23 Tumor suppressor gene q37.1 Seq+ 59971 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDS1-UGT1A6 CDS1 chr4 85530678 - UGT1A6 chr2 234602445 + Exonic hg19 BLCA TCGA-2F-A9KW-01A 39 1 CDS-5'UTR Inter-chr q21.23 Tumor suppressor gene q37.1 Seq+ 59972 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDS2-C20orf61 CDS2 chr20 5107795 - C20orf61 chr20 11791087 - Exonic hg19 BLCA TCGA-FD-A43N-01A 37 29 Out-of-frame Intra-chr p12.3 59973 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDS2-MAST3 CDS2 chr20 5167485 - MAST3 chr19 18232495 + Exonic hg19 ACC TCGA-OU-A5PI-01A 2 2 Out-of-frame Inter-chr p12.3 p13.11 AGC:MAST 59974 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDV3-TMEM108 CDV3 chr3 133293959 - TMEM108 chr3 133098596 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 92 56 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 59975 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDYL-EEF1E1 CDYL chr6 4892613 - EEF1E1 chr6 8097700 - Exonic hg19 SKCM TCGA-EE-A3JI-06A 25 12 Out-of-frame Intra-chr p25.1 p24.3 Tumor suppressor gene Seq+ 59976 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDYL2-DYNLRB2 CDYL2 chr16 80838047 - DYNLRB2 chr16 80577173 + Exonic hg19 PRAD TCGA-HC-8264-01B 5 1 In-Frame Intra-chr q23.2 q23.2 59977 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CDYL2-VEPH1 CDYL2 chr16 80838047 - VEPH1 chr3 157082301 - Exonic hg19 PRAD TCGA-HC-7744-01A 48 55 Out-of-frame Inter-chr q23.2 q25.32 Seq+ 59978 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEACAM6-CCT5 CEACAM6 chr19 42276113 - CCT5 chr5 10250033 + Exonic hg19 READ TCGA-AH-6549-01A 2 70 Out-of-frame Inter-chr q13.2 p15.2 59979 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEACAM6-DDX27 CEACAM6 chr19 42276113 - DDX27 chr20 47849303 + Exonic hg19 LUAD TCGA-71-6725-01A 2 189 Out-of-frame Inter-chr q13.2 q13.13 59980 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEACAM6-SIAE CEACAM6 chr19 42276113 - SIAE chr11 124543777 - Exonic hg19 LUAD TCGA-55-6984-01A 2 61 3'UTR-5'UTR Inter-chr q13.2 q24.2 59981 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEACAM6-ZNFX1 CEACAM6 chr19 42276113 - ZNFX1 chr20 47863418 - Exonic hg19 LUAD TCGA-49-4501-01A 2 54 Out-of-frame Inter-chr q13.2 q13.13 59982 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEBPG-GPATCH1 CEBPG chr19 33864801 - GPATCH1 chr19 33617494 + Exonic hg19 LIHC TCGA-DD-A73F-01A 30 33 5'UTR-CDS Intra-chr q13.11 Transcription factor q13.11 Seq+ 59983 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEBPG-TDRD12 CEBPG chr19 33864801 - TDRD12 chr19 33239382 + Exonic hg19 BLCA TCGA-DK-A1A3-01A 11 9 5'UTR-CDS Intra-chr q13.11 Transcription factor q13.11 Seq+ 59984 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELF1-BBOX1 CELF1 chr11 47586826 - BBOX1 chr11 27141196 + Exonic hg19 LGG TCGA-FG-5963-01A 3 1 5'UTR-CDS Intra-chr p11.2 p14.2 Seq+ 59985 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELF1-BBOX1 CELF1 chr11 47586826 - BBOX1 chr11 27141196 + Exonic hg19 LGG TCGA-FG-5963-02A 18 3 5'UTR-CDS Intra-chr p11.2 p14.2 Seq+ 59986 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELF1-CHMP4B CELF1 chr11 47574544 - CHMP4B chr20 32438758 + Exonic hg19 LUSC TCGA-43-7657-01A 34 48 5'UTR-CDS Inter-chr p11.2 q11.22 Seq+ 59987 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELF1-FNBP4 CELF1 chr11 47493743 - FNBP4 chr11 47755681 - Exonic hg19 UCEC TCGA-D1-A3JP-01A 2 1 3'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 59988 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELF1-FNBP4 CELF1 chr11 47504247 - FNBP4 chr11 47739064 - Exonic hg19 UCS TCGA-N9-A4Q4-01A 245 96 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 59989 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELF1-FNBP4 CELF1 chr11 47505005 - FNBP4 chr11 47741638 - Exonic hg19 ACC TCGA-OR-A5LO-01A 89 49 In-Frame Intra-chr p11.2 p11.2 Seq+ 59990 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELF1-KBTBD4 CELF1 chr11 47574544 - KBTBD4 chr11 47597251 - Exonic hg19 STAD TCGA-BR-A452-01A 2 2 5'UTR-CDS Intra-chr p11.2 p11.2 59991 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELF1-LUZP2 CELF1 chr11 47521005 - LUZP2 chr11 25071584 + Exonic hg19 BRCA TCGA-LL-A6FQ-01A 2 3 Out-of-frame Intra-chr p11.2 p14.3 Seq+ 59992 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELF1-MTCH2 CELF1 chr11 47494640 - MTCH2 chr11 47660603 - Exonic hg19 LUSC TCGA-43-6771-01A 129 98 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 59993 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELF1-MTCH2 CELF1 chr11 47586826 - MTCH2 chr11 47644328 - Exonic hg19 BRCA TCGA-EW-A1OW-01A 26 10 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 59994 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELF1-MYOM1 CELF1 chr11 47574544 - MYOM1 chr18 3131494 - Exonic hg19 LUAD TCGA-55-1592-01A 8 5 5'UTR-CDS Inter-chr p11.2 p11.31 Seq+ 59995 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELF1-PTPMT1 CELF1 chr11 47574544 - PTPMT1 chr11 47587458 + Exonic hg19 LUSC TCGA-63-A5MT-01A 15 15 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 59996 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELF5-RDH8 CELF5 chr19 3225616 - RDH8 chr19 10127733 + Exonic hg19 LGG TCGA-TM-A7CF-01A 3 8 5'UTR-CDS Intra-chr p13.3 p13.2 Seq+ 59997 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELF5-RDH8 CELF5 chr19 3224996 - RDH8 chr19 10127733 + Exonic hg19 LGG TCGA-TM-A7CF-02A 5 1 In-Frame Intra-chr p13.3 p13.2 Seq+ 59998 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELSR1-C10orf93 CELSR1 chr22 46929524 - C10orf93 chr10 134628418 - Exonic hg19 SKCM TCGA-EE-A29V-06A 98 88 Out-of-frame Inter-chr q13.31 59999 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELSR1-CD52 CELSR1 chr22 46859604 - CD52 chr1 26646662 + Exonic hg19 LUAD TCGA-62-8394-01A 139 138 Out-of-frame Inter-chr q13.31 p36.11 Seq+ 60000 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELSR1-CERK CELSR1 chr22 46929524 - CERK chr22 47083103 - Exonic hg19 BRCA TCGA-E2-A14P-01A 37 12 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 60001 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELSR1-KIAA1644 CELSR1 chr22 46929524 - KIAA1644 chr22 44696857 - Exonic hg19 SKCM TCGA-D3-A2JO-06A 5 4 CDS-5'UTR Intra-chr q13.31 q13.31 Seq+ 60002 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELSR1-MAFF CELSR1 chr22 46768780 - MAFF chr22 38609830 + Exonic hg19 BRCA TCGA-A2-A25F-01A 3 3 CDS-5'UTR Intra-chr q13.31 q13.1 Transcription factor Seq+ 60003 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELSR1-PACSIN2 CELSR1 chr22 46859604 - PACSIN2 chr22 43308163 - Exonic hg19 HNSC TCGA-CV-6941-01A 7 4 CDS-5'UTR Intra-chr q13.31 q13.2 Seq+ 60004 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELSR1-SEZ6L CELSR1 chr22 46929524 - SEZ6L chr22 26688372 + Exonic hg19 LUSC TCGA-46-6025-01A 378 235 In-Frame Intra-chr q13.31 q12.1 Seq+ 60005 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELSR1-TRMU CELSR1 chr22 46780440 - TRMU chr22 46751341 + Exonic hg19 UCS TCGA-ND-A4WC-01A 2 2 Out-of-frame Intra-chr q13.31 q13.31 60006 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELSR2-FAR1 CELSR2 chr1 109818372 - FAR1 chr11 13744912 + Exonic hg19 LUSC TCGA-56-A4BY-01A 2 2 Out-of-frame Inter-chr p13.3 p15.3 60007 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELSR2-KIAA1324 CELSR2 chr1 109816292 - KIAA1324 chr1 109704516 + Exonic hg19 BRCA TCGA-A7-A13D-01A 4 3 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 60008 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELSR2-KIAA1324 CELSR2 chr1 109805066 - KIAA1324 chr1 109704516 + Exonic hg19 UCEC TCGA-AX-A3G4-01A 9 8 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 60009 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELSR2-KIAA1324 CELSR2 chr1 109796011 - KIAA1324 chr1 109707121 + Exonic hg19 UCS TCGA-NA-A4QV-01A 22 19 In-Frame Intra-chr p13.3 p13.3 Seq+ 60010 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELSR2-SARS CELSR2 chr1 109816292 - SARS chr1 109773500 + Exonic hg19 UCEC TCGA-A5-A2K4-01A 13 6 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 60011 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CELSR2-SARS CELSR2 chr1 109816292 - SARS chr1 109780353 + Exonic hg19 BRCA TCGA-BH-A208-01A 20 20 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 60012 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CENPC1-STAP1 CENPC1 chr4 68405558 - STAP1 chr4 68436802 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 3 6 In-Frame Intra-chr q13.2 60013 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CENPF-SUSD4 CENPF chr1 214776664 - SUSD4 chr1 223442017 - Exonic hg19 BRCA TCGA-AR-A24Z-01A 9 3 5'UTR-CDS Intra-chr q41 q41 Seq+ 60014 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CENPL-KLHL20 CENPL chr1 173776405 - KLHL20 chr1 173720903 + Exonic hg19 LIHC TCGA-CC-A3MB-01A 2 1 In-Frame Intra-chr q25.1 q25.1 60015 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CENPM-AGR3 CENPM chr22 42341229 - AGR3 chr7 16901684 - Exonic hg19 SKCM TCGA-GN-A8LL-06A 3 1 In-Frame Inter-chr q13.2 p21.1 60016 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CENPN-C16orf62 CENPN chr16 81053881 - C16orf62 chr16 19644414 + Exonic hg19 PRAD TCGA-EJ-5530-01A 42 15 In-Frame Intra-chr q23.2 p12.3 Seq+ 60017 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CENPO-NCOA1 CENPO chr2 25040710 - NCOA1 chr2 24985556 + Exonic hg19 BRCA TCGA-PL-A8LZ-01A 4 5 3'UTR-CDS Intra-chr p23.3 p23.3 Oncogene Transcription factor Seq+ 60018 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CENPO-UBXN2A CENPO chr2 25022713 - UBXN2A chr2 24222542 + Exonic hg19 BRCA TCGA-A7-A0CG-01A 8 1 Out-of-frame Intra-chr p23.3 p23.3 Seq+ 60019 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CENPO-UBXN2A CENPO chr2 25016834 - UBXN2A chr2 24181171 + Exonic hg19 LGG TCGA-E1-5318-01A 4 2 CDS-5'UTR Intra-chr p23.3 p23.3 Seq+ 60020 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CENPP-PTPRD CENPP chr9 95142141 - PTPRD chr9 10341017 - Exonic hg19 LUSC TCGA-58-8392-01A 3 3 CDS-5'UTR Intra-chr q22.31 Oncogene Tumor suppressor gene 60021 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CENPQ-MUT CENPQ chr6 49456397 - MUT chr6 49427218 - Exonic hg19 LUSC TCGA-85-6798-01A 6 2 CDS-5'UTR Intra-chr p12.3 p12.3 Seq+ 60022 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CENPV-FERMT1 CENPV chr17 16247911 - FERMT1 chr20 6096691 - Exonic hg19 BRCA TCGA-E2-A109-01A 13 13 In-Frame Inter-chr p11.2 p12.3 Seq+ 60023 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP112-APOH CEP112 chr17 64171162 - APOH chr17 64216860 - Exonic hg19 READ TCGA-AG-3732-01A 5 3 Out-of-frame Intra-chr q24.1 q24.2 60024 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP112-OTOA CEP112 chr17 64092369 - OTOA chr16 21730454 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 5 3 In-Frame Inter-chr q24.1 p12.2 Seq+ 60025 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP112-WIPF2 CEP112 chr17 64125864 - WIPF2 chr17 38412643 + Exonic hg19 SKCM TCGA-FS-A1ZP-06A 2 2 CDS-5'UTR Intra-chr q24.1 q21.2 60026 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP128-TSHR CEP128 chr14 81227781 - TSHR chr14 81562983 + Exonic hg19 BLCA TCGA-C4-A0F7-01A 4 1 Out-of-frame Intra-chr q31.1 q31.1 Oncogene Seq+ 60027 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP135-POLR2B CEP135 chr4 56847545 - POLR2B chr4 57865783 + Exonic hg19 LGG TCGA-S9-A89Z-01A 2 2 In-Frame Intra-chr q12 q12 Seq+ 60028 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP164-APOC3 CEP164 chr11 117198924 - APOC3 chr11 116701286 + Exonic hg19 PRAD TCGA-EJ-A46G-01A 3 1 5'UTR-5'UTR Intra-chr q23.3 q23.3 60029 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP164-BACE1 CEP164 chr11 117206396 - BACE1 chr11 117166063 - Exonic hg19 LGG TCGA-DU-A7T6-01A 8 2 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 60030 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP164-SIDT2 CEP164 chr11 117253658 - SIDT2 chr11 117059424 + Exonic hg19 UCEC TCGA-5B-A90C-01A 4 3 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 60031 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP170-AKT3 CEP170 chr1 243349081 - AKT3 chr1 243736350 - Exonic hg19 SKCM TCGA-FS-A1ZD-06A 4 35 In-Frame Intra-chr AGC:Akt Oncogene Seq+ 60032 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP170-C1orf100 CEP170 chr1 243349561 - C1orf100 chr1 244527990 + Exonic hg19 GBM TCGA-06-2561-01A 3 6 CDS-5'UTR Intra-chr q44 Seq+ 60033 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP170-IFI16 CEP170 chr1 243418342 - IFI16 chr1 158979793 + Exonic hg19 PRAD TCGA-YL-A8HM-01A 12 1 5'UTR-5'UTR Intra-chr q23.1 Tumor suppressor gene Seq+ 60034 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP170-RGS7 CEP170 chr1 243385026 - RGS7 chr1 240990472 - Exonic hg19 LUAD TCGA-44-8119-01A 9 9 In-Frame Intra-chr q43 Seq+ 60035 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP170-SDCCAG8 CEP170 chr1 243418349 - SDCCAG8 chr1 243468015 + Exonic hg19 LUAD TCGA-73-4662-01A 25 8 5'UTR-CDS Intra-chr Seq+ 60036 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP170-TSNAX CEP170 chr1 243418349 - TSNAX chr1 231672959 + Exonic hg19 SARC TCGA-DX-A8BV-01A 2 1 5'UTR-CDS Intra-chr q42.2 60037 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP170-UBE2Q1 CEP170 chr1 243418342 - UBE2Q1 chr1 154528440 - Exonic hg19 BLCA TCGA-4Z-AA84-01A 12 2 5'UTR-CDS Intra-chr q21.3 Seq+ 60038 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP192-AFG3L2 CEP192 chr18 13001581 - AFG3L2 chr18 12329782 - Exonic hg19 LUSC TCGA-J1-A4AH-01A 26 9 Out-of-frame Intra-chr p11.21 p11.21 Seq+ 60039 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP192-PIGU CEP192 chr18 13001581 - PIGU chr20 33176411 - Exonic hg19 ESCA TCGA-R6-A8WG-01A 3 17 Out-of-frame Inter-chr p11.21 q11.22 Seq+ 60040 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP290-FGGY CEP290 chr12 88482809 - FGGY chr1 60091660 + Exonic hg19 SARC TCGA-WK-A8XO-01A 38 21 In-Frame Inter-chr q21.32 p32.1 Seq+ 60041 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP290-VEZT CEP290 chr12 88486458 - VEZT chr12 95645716 + Exonic hg19 SARC TCGA-DX-A3M1-01A 22 11 Out-of-frame Intra-chr q21.32 q22 Tumor suppressor gene Seq+ 60042 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP350-GPR161 CEP350 chr1 179924277 - GPR161 chr1 168074132 - Exonic hg19 PRAD TCGA-EJ-5518-01A 11 9 5'UTR-5'UTR Intra-chr q25.2 q24.2 Seq+ 60043 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP350-LEPROT CEP350 chr1 180047809 - LEPROT chr1 65897486 + Exonic hg19 PRAD TCGA-YL-A8SL-01B 10 6 In-Frame Intra-chr q25.2 p31.3 Seq+ 60044 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP350-TDRD5 CEP350 chr1 180010383 - TDRD5 chr1 179659831 + Exonic hg19 OV TCGA-13-0799-01A 5 6 Out-of-frame Intra-chr q25.2 q25.2 Seq+ 60045 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP350-TOR1AIP1 CEP350 chr1 179981210 - TOR1AIP1 chr1 179869261 + Exonic hg19 BLCA TCGA-E7-A85H-01A 5 3 In-Frame Intra-chr q25.2 q25.2 Seq+ 60046 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP350-TOR1AIP1 CEP350 chr1 179966310 - TOR1AIP1 chr1 179869261 + Exonic hg19 BLCA TCGA-UY-A9PE-01A 4 1 In-Frame Intra-chr q25.2 q25.2 Seq+ 60047 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP63-AGPS CEP63 chr3 134270854 - AGPS chr2 178402802 + Exonic hg19 MESO TCGA-3H-AB3S-01A 23 8 Out-of-frame Inter-chr q22.2 q31.2 Seq+ 60048 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP70-GYG1 CEP70 chr3 138289876 - GYG1 chr3 148741840 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 265 280 In-Frame Intra-chr q22.3 q24 Seq+ 60049 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP70-STAG1 CEP70 chr3 138289160 - STAG1 chr3 136287703 - Exonic hg19 BRCA TCGA-D8-A1JL-01A 12 15 In-Frame Intra-chr q22.3 q22.3 Seq+ 60050 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP70-TNFSF10 CEP70 chr3 138216873 - TNFSF10 chr3 172227111 - Exonic hg19 PRAD TCGA-V1-A9O5-01A 8 8 In-Frame Intra-chr q22.3 q26.31 Seq+ 60051 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP70-TNFSF10 CEP70 chr3 138216873 - TNFSF10 chr3 172227111 - Exonic hg19 PRAD TCGA-V1-A9O5-06A 2 1 In-Frame Intra-chr q22.3 q26.31 Seq+ 60052 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP72-AHRR CEP72 chr5 624694 - AHRR chr5 344008 + Exonic hg19 LUSC TCGA-85-8277-01A 2 1 In-Frame Intra-chr p15.33 Tumor suppressor gene Transcription factor 60053 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP72-CDH9 CEP72 chr5 639339 - CDH9 chr5 26903933 - Exonic hg19 SARC TCGA-DX-A7EF-01A 8 2 In-Frame Intra-chr p14.1 Seq+ 60054 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP72-EXOC3 CEP72 chr5 648031 - EXOC3 chr5 453485 + Exonic hg19 ESCA TCGA-V5-AASW-01A 6 46 Out-of-frame Intra-chr p15.33 Seq+ 60055 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP72-TPPP CEP72 chr5 620376 - TPPP chr5 678179 - Exonic hg19 LUAD TCGA-MP-A4T8-01A 2 5 CDS-5'UTR Intra-chr p15.33 60056 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP85-GRRP1 CEP85 chr1 26570809 - GRRP1 chr1 26487703 + Exonic hg19 LUAD TCGA-78-7155-01A 6 1 Out-of-frame Intra-chr p36.11 60057 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP85-RBFOX1 CEP85 chr1 26582356 - RBFOX1 chr16 7102058 + Exonic hg19 SKCM TCGA-YG-AA3P-06A 2 2 CDS-5'UTR Inter-chr p36.11 p13.3 60058 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP85-STX12 CEP85 chr1 26566329 - STX12 chr1 28116073 + Exonic hg19 COAD TCGA-AZ-4614-01A 20 4 In-Frame Intra-chr p36.11 p35.3 Seq+ 60059 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP89-CEACAM1 CEP89 chr19 33406243 - CEACAM1 chr19 43016631 - Exonic hg19 SARC TCGA-DX-A8BN-01A 10 1 Out-of-frame Intra-chr q13.11 q13.2 Tumor suppressor gene 60060 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEP95-RBM11 CEP95 chr17 62503234 - RBM11 chr21 15593418 + Exonic hg19 BRCA TCGA-AR-A250-01A 15 9 In-Frame Inter-chr q23.3 q11.2 Seq+ 60061 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CEPT1-MOV10 CEPT1 chr1 111703918 - MOV10 chr1 113229588 + Exonic hg19 UCEC TCGA-AX-A3G3-01A 7 4 Out-of-frame Intra-chr p13.3 p13.2 Seq+ 60062 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CERK-SCUBE1 CERK chr22 47103740 - SCUBE1 chr22 43654341 - Exonic hg19 PRAD TCGA-HC-A8D0-01A 6 1 In-Frame Intra-chr q13.31 q13.2 60063 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CERK-SLC25A17 CERK chr22 47115983 - SLC25A17 chr22 41195087 - Exonic hg19 BRCA TCGA-BH-A0H7-01A 23 15 Out-of-frame Intra-chr q13.31 q13.2 60064 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CERS2-SETDB1 CERS2 chr1 150940140 - SETDB1 chr1 150919362 + Exonic hg19 BLCA TCGA-FD-A5BS-01A 3 1 In-Frame Intra-chr q21.3 q21.3 Transcription factor Seq+ 60065 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CERS4-SPAG17 CERS4 chr19 8275746 - SPAG17 chr1 118550821 - Exonic hg19 BRCA TCGA-AC-A5XU-01A 16 3 5'UTR-CDS Inter-chr p13.2 p12 Seq+ 60066 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CERS5-C12orf28 CERS5 chr12 50560884 - C12orf28 chr12 70249060 + Exonic hg19 PAAD TCGA-HZ-7922-01A 4 3 Out-of-frame Intra-chr q13.12 60067 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CERS5-SAMD11 CERS5 chr12 50560884 - SAMD11 chr1 874420 + Exonic hg19 BRCA TCGA-E2-A1LL-01A 4 5 Out-of-frame Inter-chr q13.12 p36.33 Seq+ 60068 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CERS6-ABCB11 CERS6 chr2 169487552 - ABCB11 chr2 169801471 - Exonic hg19 STAD TCGA-BR-8486-01A 8 15 In-Frame Intra-chr q24.3 Seq+ 60069 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CERS6-GAD1 CERS6 chr2 169487552 - GAD1 chr2 171715314 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 2 2 In-Frame Intra-chr q24.3 q31.1 60070 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CERS6-PSMD14 CERS6 chr2 169574488 - PSMD14 chr2 162223989 + Exonic hg19 BLCA TCGA-UY-A9PE-01A 3 2 Out-of-frame Intra-chr q24.3 q24.2 Seq+ 60071 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CERS6-RNF25 CERS6 chr2 169417832 - RNF25 chr2 219533402 - Exonic hg19 PRAD TCGA-YJ-A8SW-01A 3 2 In-Frame Intra-chr q24.3 q35 60072 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CERS6-STK39 CERS6 chr2 169313128 - STK39 chr2 169038600 - Exonic hg19 PAAD TCGA-IB-A7M4-01A 2 1 Out-of-frame Intra-chr q24.3 q24.3 60073 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CES4A-PDP2 CES4A chr16 67029732 - PDP2 chr16 66918134 + Exonic hg19 LIHC TCGA-2Y-A9GZ-01A 2 1 5'UTR-5'UTR Intra-chr q22.1 q22.1 60074 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CFB-CCT5 CFB chr6 31919861 - CCT5 chr5 10250033 + Exonic hg19 LIHC TCGA-EP-A3JL-01A 2 57 Out-of-frame Inter-chr p15.2 60075 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CFB-NDUFV1 CFB chr6 31919861 - NDUFV1 chr11 67375697 + Exonic hg19 CHOL TCGA-W5-AA36-01A 2 17 Out-of-frame Inter-chr q13.2 60076 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CFB-SERPINA1 CFB chr6 31919830 - SERPINA1 chr14 94857030 - Exonic hg19 LIHC TCGA-2Y-A9H9-01A 4 1 Out-of-frame Inter-chr q32.13 60077 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CFB-SERPINA1 CFB chr6 31919830 - SERPINA1 chr14 94857030 - Exonic hg19 LIHC TCGA-DD-A73G-01A 4 2 Out-of-frame Inter-chr q32.13 60078 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CFB-SERPINA1 CFB chr6 31919830 - SERPINA1 chr14 94857030 - Exonic hg19 LIHC TCGA-DD-AADK-01A 14 1 Out-of-frame Inter-chr q32.13 60079 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CFB-SERPINA1 CFB chr6 31919830 - SERPINA1 chr14 94857030 - Exonic hg19 LIHC TCGA-G3-A25Z-01A 10 1 Out-of-frame Inter-chr q32.13 60080 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CFB-SERPINA1 CFB chr6 31919830 - SERPINA1 chr14 94857030 - Exonic hg19 LIHC TCGA-GJ-A6C0-01A 4 1 Out-of-frame Inter-chr q32.13 60081 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CFB-STAT6 CFB chr6 31919861 - STAT6 chr12 57496773 - Exonic hg19 UCEC TCGA-AX-A3G3-01A 2 76 Out-of-frame Inter-chr q13.3 Transcription factor 60082 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CFDP1-WWOX CFDP1 chr16 75428988 - WWOX chr16 79245505 + Exonic hg19 BLCA TCGA-XF-A9T0-01A 85 77 Out-of-frame Intra-chr q23.1 q23.1 Tumor suppressor gene Seq+ 60083 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CFLAR-AGBL5 CFLAR chr2 201997857 - AGBL5 chr2 27290362 + Exonic hg19 KIRP TCGA-A4-A5Y0-01A 40 55 Out-of-frame Intra-chr q33.1 p23.3 Seq+ 60084 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CFLAR-NDUFB3 CFLAR chr2 201981204 - NDUFB3 chr2 201950182 + Exonic hg19 UCS TCGA-N5-A59E-01A 30 28 5'UTR-CDS Intra-chr q33.1 q33.1 Seq+ 60085 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CFLAR-NDUFB3 CFLAR chr2 202005162 - NDUFB3 chr2 201950182 + Exonic hg19 HNSC TCGA-P3-A6T4-01A 33 85 Out-of-frame Intra-chr q33.1 q33.1 Seq+ 60086 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CFLAR-NDUFB3 CFLAR chr2 202014558 - NDUFB3 chr2 201950182 + Exonic hg19 UCS TCGA-QN-A5NN-01A 2 7 Out-of-frame Intra-chr q33.1 q33.1 Seq+ 60087 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CFTR-ASZ1 CFTR chr7 117251862 - ASZ1 chr7 117066989 - Exonic hg19 LGG TCGA-HT-A61C-01A 8 4 Out-of-frame Intra-chr q31.2 Tumor suppressor gene q31.2 Seq+ 60088 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CFTR-WNT2 CFTR chr7 117251862 - WNT2 chr7 116960847 - Exonic hg19 LGG TCGA-HT-A61C-01A 2 1 Out-of-frame Intra-chr q31.2 Tumor suppressor gene q31.2 60089 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CGGBP1-MITF CGGBP1 chr3 88190120 - MITF chr3 69998202 + Exonic hg19 HNSC TCGA-CV-5432-01A 2 1 5'UTR-CDS Intra-chr p11.1 Transcription factor p13 Oncogene Transcription factor 60090 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CGGBP1-SCN11A CGGBP1 chr3 88190120 - SCN11A chr3 38968422 - Exonic hg19 BRCA TCGA-BH-A0BL-01A 5 5 5'UTR-CDS Intra-chr p11.1 Transcription factor p22.2 Seq+ 60091 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CGNL1-TCF12 CGNL1 chr15 57754090 - TCF12 chr15 57578355 + Exonic hg19 BRCA TCGA-AR-A251-01A 25 19 CDS-3'UTR Intra-chr q21.3 q21.3 Oncogene Transcription factor Seq+ 60092 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CGRRF1-WDHD1 CGRRF1 chr14 54976781 - WDHD1 chr14 55451578 - Exonic hg19 PRAD TCGA-EJ-7328-01A 16 7 Out-of-frame Intra-chr q22.2 q22.3 Seq+ 60093 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHAF1A-CCDC94 CHAF1A chr19 4428887 - CCDC94 chr19 4261991 + Exonic hg19 BRCA TCGA-OL-A5D7-01A 98 72 In-Frame Intra-chr p13.3 p13.3 Seq+ 60094 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHAF1B-DOPEY2 CHAF1B chr21 37763966 - DOPEY2 chr21 37665618 + Exonic hg19 CESC TCGA-DS-A1OC-01A 70 30 Out-of-frame Intra-chr q22.12 q22.12 Seq+ 60095 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHCHD3-CSMD1 CHCHD3 chr7 132570422 - CSMD1 chr8 3205683 - Exonic hg19 SARC TCGA-DX-A3LS-01A 3 4 Out-of-frame Inter-chr q33 Transcription factor p23.2 Tumor suppressor gene Seq+ 60096 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHCHD3-ITPKA CHCHD3 chr7 132659929 - ITPKA chr15 41794600 + Exonic hg19 COAD TCGA-AM-5820-01A 9 14 In-Frame Inter-chr q33 Transcription factor q15.1 Seq+ 60097 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHCHD3-MKLN1 CHCHD3 chr7 132754902 - MKLN1 chr7 131096065 + Exonic hg19 SKCM TCGA-EE-A20I-06A 3 6 In-Frame Intra-chr q33 Transcription factor q32.3 Seq+ 60098 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHCHD3-NUP205 CHCHD3 chr7 132709306 - NUP205 chr7 135333152 + Exonic hg19 LGG TCGA-P5-A72U-01A 3 5 Out-of-frame Intra-chr q33 Transcription factor q33 Seq+ 60099 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHCHD6-MYLK CHCHD6 chr3 126423242 - MYLK chr3 123550517 - Exonic hg19 PRAD TCGA-HC-A6AP-01A 4 4 CDS-5'UTR Intra-chr q21.3 q21.1 Seq+ 60100 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHCHD6-MYO1A CHCHD6 chr3 126452065 - MYO1A chr12 57424958 - Exonic hg19 SKCM TCGA-EB-A5UL-06A 3 3 In-Frame Inter-chr q21.3 q13.3 Tumor suppressor gene Seq+ 60101 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHCHD6-UBA5 CHCHD6 chr3 126449473 - UBA5 chr3 132384667 + Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 35 24 In-Frame Intra-chr q21.3 q22.1 Seq+ 60102 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD1-MTOR CHD1 chr5 98199112 - MTOR chr1 11273623 - Exonic hg19 LAML TCGA-AB-2939-03A 16 45 Out-of-frame Inter-chr q21.1 Tumor suppressor gene p36.22 Oncogene Seq+ 60103 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD1-RGMB CHD1 chr5 98215256 - RGMB chr5 98128789 + Exonic hg19 COAD TCGA-DM-A288-01A 30 23 In-Frame Intra-chr q21.1 Tumor suppressor gene q15 Seq+ 60104 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD1-SLCO6A1 CHD1 chr5 98228229 - SLCO6A1 chr5 101748847 - Exonic hg19 PRAD TCGA-HC-A6AP-01A 16 20 In-Frame Intra-chr q21.1 Tumor suppressor gene q21.1 Seq+ 60105 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD1L-LCE1A CHD1L chr1 146747131 - LCE1A chr1 152799927 + Exonic hg19 PRAD TCGA-YJ-A8SW-01A 8 6 Out-of-frame Intra-chr q21.1 q21.3 Seq+ 60106 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD2-ACSBG1 CHD2 chr15 93444529 - ACSBG1 chr15 78466181 - Exonic hg19 SKCM TCGA-ER-A197-06A 60 73 Out-of-frame Intra-chr q26.1 q25.1 Seq+ 60107 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD2-DYX1C1 CHD2 chr15 93444529 - DYX1C1 chr15 55677912 - Exonic hg19 SARC TCGA-FX-A3TO-01A 35 11 Out-of-frame Intra-chr q26.1 60108 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD2-HOMER2 CHD2 chr15 93496803 - HOMER2 chr15 83533011 - Exonic hg19 BRCA TCGA-A8-A06U-01A 20 18 In-Frame Intra-chr q26.1 q25.2 Tumor suppressor gene Seq+ 60109 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD2-ZNF880 CHD2 chr15 93444529 - ZNF880 chr19 52887102 + Exonic hg19 SKCM TCGA-ER-A197-06A 2 5 Out-of-frame Inter-chr q26.1 q13.41 Transcription factor Seq+ 60110 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD3-RAD51C CHD3 chr17 7797253 - RAD51C chr17 56787220 + Exonic hg19 ACC TCGA-OR-A5KY-01A 71 7 In-Frame Intra-chr p13.1 q22 Tumor suppressor gene Seq+ 60111 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD4-CLEC9A CHD4 chr12 6686951 - CLEC9A chr12 10194065 + Exonic hg19 BRCA TCGA-AO-A12A-01A 31 9 CDS-5'UTR Intra-chr p13.31 p13.2 Seq+ 60112 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD4-CPM CHD4 chr12 6700632 - CPM chr12 69265736 - Exonic hg19 SARC TCGA-DX-A23R-01A 404 285 Out-of-frame Intra-chr p13.31 q15 Seq+ 60113 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD4-DTX1 CHD4 chr12 6690210 - DTX1 chr12 113515229 + Exonic hg19 BRCA TCGA-A1-A0SK-01A 32 22 In-Frame Intra-chr p13.31 q24.13 Seq+ 60114 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD6-ABHD12 CHD6 chr20 40141485 - ABHD12 chr20 25304066 - Exonic hg19 LUAD TCGA-86-7954-01A 8 4 Out-of-frame Intra-chr q12 p11.21 Seq+ 60115 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD6-ATP9A CHD6 chr20 40111949 - ATP9A chr20 50346517 - Exonic hg19 READ TCGA-DC-6156-01A 10 2 In-Frame Intra-chr q12 q13.2 60116 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD6-C20orf152 CHD6 chr20 40246979 - C20orf152 chr20 34560551 + Exonic hg19 LUAD TCGA-49-4501-01A 6 11 5'UTR-CDS Intra-chr q12 Seq+ 60117 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD6-CCDC90A CHD6 chr20 40246979 - CCDC90A chr6 13807276 - Exonic hg19 BRCA TCGA-EW-A1PF-01A 3 11 5'UTR-CDS Inter-chr q12 Seq+ 60118 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD6-CHRNB4 CHD6 chr20 40141485 - CHRNB4 chr15 78923674 - Exonic hg19 BRCA TCGA-C8-A8HR-01A 2 2 In-Frame Inter-chr q12 q25.1 60119 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD6-CTNNBL1 CHD6 chr20 40141485 - CTNNBL1 chr20 36488301 + Exonic hg19 CESC TCGA-C5-A7CO-01A 15 8 In-Frame Intra-chr q12 q11.23 Seq+ 60120 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD6-DHX58 CHD6 chr20 40043826 - DHX58 chr17 40253964 - Exonic hg19 STAD TCGA-BR-4357-01A 8 7 In-Frame Inter-chr q12 q21.2 Seq+ 60121 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD6-EFCAB11 CHD6 chr20 40161689 - EFCAB11 chr14 90263668 - Exonic hg19 BRCA TCGA-C8-A12L-01A 8 3 In-Frame Inter-chr q12 q32.11 Seq+ 60122 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD6-FAT3 CHD6 chr20 40085904 - FAT3 chr11 92613897 + Exonic hg19 LUAD TCGA-97-A4M3-01A 9 4 Out-of-frame Inter-chr q12 60123 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD6-MYH7B CHD6 chr20 40068640 - MYH7B chr20 33583139 + Exonic hg19 SARC TCGA-DX-AB2Q-01A 4 1 Out-of-frame Intra-chr q12 q11.22 Seq+ 60124 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD6-PTPRT CHD6 chr20 40246979 - PTPRT chr20 40877462 - Exonic hg19 PRAD TCGA-ZG-A9KY-01A 4 48 5'UTR-CDS Intra-chr q12 q13.11 Oncogene Tumor suppressor gene Seq+ 60125 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD6-SPEN CHD6 chr20 40246979 - SPEN chr1 16199311 + Exonic hg19 THYM TCGA-ZB-A969-01A 2 3 5'UTR-CDS Inter-chr q12 p36.21 Transcription factor Seq+ 60126 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD6-TSHZ2 CHD6 chr20 40074305 - TSHZ2 chr20 52103683 + Exonic hg19 BRCA TCGA-E2-A106-01A 7 2 CDS-3'UTR Intra-chr q12 q13.2 Transcription factor Seq+ 60127 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD6-WFDC11 CHD6 chr20 40246979 - WFDC11 chr20 44279290 - Exonic hg19 BRCA TCGA-AQ-A54O-01A 2 23 5'UTR-5'UTR Intra-chr q12 q13.12 Seq+ 60128 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD7-ASPH CHD7 chr8 61655656 - ASPH chr8 62596747 - Exonic hg19 BRCA TCGA-AR-A1AU-01A 9 8 Out-of-frame Intra-chr q12.2 q12.3 Seq+ 60129 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD7-CCDC58 CHD7 chr8 61743136 - CCDC58 chr3 122081874 - Exonic hg19 BRCA TCGA-D8-A1JL-01A 117 109 Out-of-frame Inter-chr q12.2 q21.1 Seq+ 60130 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD7-EMID1 CHD7 chr8 61714152 - EMID1 chr22 29610915 + Exonic hg19 UCEC TCGA-A5-A2K4-01A 6 5 Out-of-frame Inter-chr q12.2 q12.2 Seq+ 60131 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD7-FAM164A CHD7 chr8 61591641 - FAM164A chr8 79601457 + Exonic hg19 PRAD TCGA-XK-AAIV-01A 7 1 Out-of-frame Intra-chr q12.2 60132 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD7-KAT6A CHD7 chr8 61591641 - KAT6A chr8 41845081 - Exonic hg19 ESCA TCGA-LN-A49L-01A 3 21 5'UTR-CDS Intra-chr q12.2 p11.21 Oncogene Seq+ 60133 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD7-RAB2A CHD7 chr8 61591641 - RAB2A chr8 61471411 + Exonic hg19 UCEC TCGA-AJ-A3TW-01A 6 4 5'UTR-CDS Intra-chr q12.2 q12.1 Seq+ 60134 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD7-TACC1 CHD7 chr8 61693989 - TACC1 chr8 38599869 + Exonic hg19 BRCA TCGA-C8-A27A-01A 8 6 Out-of-frame Intra-chr q12.2 p11.22 Seq+ 60135 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD7-TCF7L2 CHD7 chr8 61655656 - TCF7L2 chr10 114900943 + Exonic hg19 COAD TCGA-F4-6807-01A 52 19 In-Frame Inter-chr q12.2 q25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 60136 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD7-TOX CHD7 chr8 61655656 - TOX chr8 59872567 - Exonic hg19 GBM TCGA-06-5414-01A 3 11 In-Frame Intra-chr q12.2 q12.1 Seq+ 60137 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD7-TOX CHD7 chr8 61655656 - TOX chr8 59872567 - Exonic hg19 COAD TCGA-4T-AA8H-01A 26 10 In-Frame Intra-chr q12.2 q12.1 Seq+ 60138 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD7-TOX CHD7 chr8 61655656 - TOX chr8 59872567 - Exonic hg19 COAD TCGA-CM-6172-01A 54 36 In-Frame Intra-chr q12.2 q12.1 Seq+ 60139 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD7-WHSC1L1 CHD7 chr8 61591641 - WHSC1L1 chr8 38162963 - Exonic hg19 OV TCGA-24-1604-01A 11 4 5'UTR-CDS Intra-chr q12.2 p11.23 Tumor suppressor gene Seq+ 60140 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD8-AP1S1 CHD8 chr14 21878010 - AP1S1 chr7 100803800 + Exonic hg19 PRAD TCGA-HC-7077-01A 63 6 In-Frame Inter-chr q11.2 q22.1 Seq+ 60141 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD8-IMPG1 CHD8 chr14 21894287 - IMPG1 chr6 76744504 - Exonic hg19 BRCA TCGA-PE-A5DD-01A 6 5 Out-of-frame Inter-chr q11.2 q14.1 Seq+ 60142 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD8-KIAA1211 CHD8 chr14 21924191 - KIAA1211 chr4 57045450 + Exonic hg19 LGG TCGA-DU-7302-01A 9 14 5'UTR-5'UTR Inter-chr q11.2 q12 Seq+ 60143 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD8-RAB2B CHD8 chr14 21924191 - RAB2B chr14 21936911 - Exonic hg19 BRCA TCGA-AN-A0FX-01A 7 12 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 60144 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD8-TG CHD8 chr14 21924191 - TG chr8 134144056 + Exonic hg19 SARC TCGA-DX-A7EU-01A 94 324 5'UTR-CDS Inter-chr q11.2 q24.22 60145 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD8-TOX4 CHD8 chr14 21898960 - TOX4 chr14 21957332 + Exonic hg19 BRCA TCGA-AO-A128-01A 62 45 In-Frame Intra-chr q11.2 q11.2 Seq+ 60146 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD9-DLC1 CHD9 chr16 53308214 - DLC1 chr8 13162811 - Exonic hg19 BRCA TCGA-AR-A1AN-01A 3 1 Out-of-frame Inter-chr q12.2 p22 Tumor suppressor gene 60147 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD9-KSR1 CHD9 chr16 53088989 - KSR1 chr17 25877594 + Exonic hg19 BRCA TCGA-A8-A081-01A 3 2 5'UTR-5'UTR Inter-chr q12.2 q11.2 TKL:RAF Seq+ 60148 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD9-RAD51B CHD9 chr16 53191453 - RAD51B chr14 68758601 + Exonic hg19 BRCA TCGA-B6-A0RU-01A 6 8 In-Frame Inter-chr q12.2 q24.1 Seq+ 60149 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHD9-SPG7 CHD9 chr16 53191453 - SPG7 chr16 89590414 + Exonic hg19 BRCA TCGA-A8-A092-01A 4 4 Out-of-frame Intra-chr q12.2 q24.3 Seq+ 60150 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHDH-ACTR8 CHDH chr3 53874956 - ACTR8 chr3 53908391 - Exonic hg19 UCEC TCGA-D1-A3JP-01A 2 1 5'UTR-CDS Intra-chr p21.1 p21.1 60151 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHEK1-EXOC6 CHEK1 chr11 125505428 - EXOC6 chr10 94757231 + Exonic hg19 OV TCGA-09-1665-01B 2 2 Out-of-frame Inter-chr q24.2 Oncogene Tumor suppressor gene q23.33 Seq+ 60152 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHEK2-C22orf31 CHEK2 chr22 29130391 - C22orf31 chr22 29456831 - Exonic hg19 LUSC TCGA-NC-A5HD-01A 5 2 Out-of-frame Intra-chr q12.1 Oncogene Tumor suppressor gene q12.1 Seq+ 60153 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHERP-CPAMD8 CHERP chr19 16652681 - CPAMD8 chr19 17017927 - Exonic hg19 OV TCGA-13-0768-01A 3 4 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 60154 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHERP-HSH2D CHERP chr19 16643409 - HSH2D chr19 16268020 + Exonic hg19 SKCM TCGA-EB-A5SH-06A 162 67 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 60155 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHERP-RHAG CHERP chr19 16652681 - RHAG chr6 49587075 - Exonic hg19 LGG TCGA-TM-A7CF-01A 7 8 In-Frame Inter-chr p13.11 p12.3 Seq+ 60156 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHERP-RPTOR CHERP chr19 16640459 - RPTOR chr17 78727810 + Exonic hg19 UCEC TCGA-EY-A4KR-01A 7 4 Out-of-frame Inter-chr p13.11 q25.3 60157 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHFR-OSBPL8 CHFR chr12 133463782 - OSBPL8 chr12 76881398 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 5 15 CDS-5'UTR Intra-chr q24.33 Tumor suppressor gene q21.2 Seq+ 60158 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHFR-ZNF565 CHFR chr12 133430017 - ZNF565 chr19 36686058 - Exonic hg19 SARC TCGA-DX-A6B9-01A 2 2 Out-of-frame Inter-chr q24.33 Tumor suppressor gene q13.12 Transcription factor Seq+ 60159 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHGB-AC011333.1 CHGB chr20 5906007 - AC011333.1 chr5 173473096 + Exonic hg19 PCPG TCGA-RW-A68C-01A 2 13 Out-of-frame Inter-chr p12.3 q35.2 60160 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHGB-CLU CHGB chr20 5903719 - CLU chr8 27472215 - Exonic hg19 PCPG TCGA-QR-A700-01A 3 1 Out-of-frame Inter-chr p12.3 p21.1 Tumor suppressor gene 60161 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHGB-IGF2 CHGB chr20 5903719 - IGF2 chr11 2154895 - Exonic hg19 PCPG TCGA-QR-A6GW-01A 3 8 Out-of-frame Inter-chr p12.3 p15.5 Oncogene 60162 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHGB-IGF2 CHGB chr20 5903719 - IGF2 chr11 2154895 - Exonic hg19 PCPG TCGA-S7-A7X2-01A 4 11 Out-of-frame Inter-chr p12.3 p15.5 Oncogene 60163 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHGB-IGF2 CHGB chr20 5903719 - IGF2 chr11 2154895 - Exonic hg19 PCPG TCGA-WB-A819-01A 4 12 Out-of-frame Inter-chr p12.3 p15.5 Oncogene 60164 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHGB-LIMCH1 CHGB chr20 5903719 - LIMCH1 chr4 41648502 + Exonic hg19 PCPG TCGA-P8-A6RY-01A 3 1 Out-of-frame Inter-chr p12.3 p13 60165 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHI3L1-APOA2 CHI3L1 chr1 203148059 - APOA2 chr1 161193418 - Exonic hg19 LIHC TCGA-DD-AAC8-01A 2 1 3'UTR-5'UTR Intra-chr q32.1 q23.3 60166 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHI3L1-CBS CHI3L1 chr1 203148059 - CBS chr21 44476011 - Exonic hg19 THCA TCGA-EM-A3SU-01A 2 167 3'UTR-CDS Inter-chr q32.1 q22.3 60167 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHI3L1-THSD4 CHI3L1 chr1 203148059 - THSD4 chr15 72072881 + Exonic hg19 SARC TCGA-IW-A3M6-01A 2 109 3'UTR-3'UTR Inter-chr q32.1 q23 60168 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHI3L1-UTRN CHI3L1 chr1 203148059 - UTRN chr6 144665237 + Exonic hg19 LGG TCGA-S9-A6U0-01A 2 17 3'UTR-CDS Inter-chr q32.1 q24.2 60169 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHIC1-CDX4 CHIC1 chrX 72804408 - CDX4 chrX 72673353 + Exonic hg19 UCEC TCGA-B5-A3FH-01A 53 24 Out-of-frame Intra-chr q13.2 q13.2 Transcription factor Seq+ 60170 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHIC2-LPHN3 CHIC2 chr4 54880004 - LPHN3 chr4 62248842 + Exonic hg19 GBM TCGA-19-0957-02A 10 49 CDS-5'UTR Intra-chr q12 60171 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHIC2-MANBA CHIC2 chr4 54915122 - MANBA chr4 103611928 - Exonic hg19 LUAD TCGA-50-6592-01A 5 3 Out-of-frame Intra-chr q12 q24 Seq+ 60172 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHIC2-SIPA1L3 CHIC2 chr4 54915122 - SIPA1L3 chr19 38519729 + Exonic hg19 SKCM TCGA-FS-A1ZK-06A 11 7 CDS-5'UTR Inter-chr q12 q13.13 Seq+ 60173 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHIC2-TSGA10 CHIC2 chr4 54915122 - TSGA10 chr2 99614684 - Exonic hg19 UCS TCGA-N9-A4Q1-01A 31 16 Out-of-frame Inter-chr q12 q11.2 Seq+ 60174 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHKA-CCNB3 CHKA chr11 67888295 - CCNB3 chrX 50027542 + Exonic hg19 STAD TCGA-BR-8687-01A 2 7 CDS-5'UTR Inter-chr q13.2 p11.22 Seq+ 60175 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHKA-GDPD5 CHKA chr11 67842184 - GDPD5 chr11 75173934 - Exonic hg19 LUAD TCGA-05-5425-01A 3 4 In-Frame Intra-chr q13.2 q13.5 60176 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHKA-HNF1B CHKA chr11 67842184 - HNF1B chr17 36047395 - Exonic hg19 LUAD TCGA-97-A4M3-01A 58 33 In-Frame Inter-chr q13.2 q12 Transcription factor Seq+ 60177 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHKA-NADSYN1 CHKA chr11 67836346 - NADSYN1 chr11 71191801 + Exonic hg19 SKCM TCGA-D9-A3Z3-06A 19 1 Out-of-frame Intra-chr q13.2 q13.4 Seq+ 60178 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHKA-PAK1 CHKA chr11 67864486 - PAK1 chr11 77085410 - Exonic hg19 SKCM TCGA-WE-A8ZN-06A 10 2 Out-of-frame Intra-chr q13.2 q14.1 STE:STE20 60179 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHKA-PC CHKA chr11 67864486 - PC chr11 66639630 - Exonic hg19 BRCA TCGA-LL-A440-01A 30 12 CDS-5'UTR Intra-chr q13.2 q13.2 Seq+ 60180 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHKA-SHANK2 CHKA chr11 67888295 - SHANK2 chr11 70666787 - Exonic hg19 SKCM TCGA-EB-A82B-01A 5 1 Out-of-frame Intra-chr q13.2 q13.4 60181 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHKA-XRRA1 CHKA chr11 67888295 - XRRA1 chr11 74641417 - Exonic hg19 BRCA TCGA-AC-A3OD-01B 7 3 Out-of-frame Intra-chr q13.2 q13.4 Seq+ 60182 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHM-ABCB7 CHM chrX 85282495 - ABCB7 chrX 74334666 - Exonic hg19 BRCA TCGA-AR-A255-01A 6 2 Out-of-frame Intra-chr q21.2 q13.3 Seq+ 60183 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHM-KCNIP4 CHM chrX 85149193 - KCNIP4 chr4 20852290 - Exonic hg19 HNSC TCGA-KU-A66T-01A 2 2 In-Frame Inter-chr q21.2 p15.2 Seq+ 60184 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHM-KLHL4 CHM chrX 85282495 - KLHL4 chrX 86868880 + Exonic hg19 HNSC TCGA-CR-7367-01A 7 4 In-Frame Intra-chr q21.2 q21.31 60185 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHMP1A-FANCA CHMP1A chr16 89720312 - FANCA chr16 89833645 - Exonic hg19 STAD TCGA-BR-8590-01A 5 4 Out-of-frame Intra-chr q24.3 q24.3 Oncogene Seq+ 60186 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHMP1A-FANCA CHMP1A chr16 89723990 - FANCA chr16 89851372 - Exonic hg19 ESCA TCGA-IG-A97H-01A 2 11 Out-of-frame Intra-chr q24.3 q24.3 Oncogene Seq+ 60187 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHMP4B-CBFA2T2 CHMP4B chr20 32399464 - CBFA2T2 chr20 32232153 + Exonic hg19 BRCA TCGA-AR-A256-01A 26 42 Out-of-frame Intra-chr q11.22 q11.21 Seq+ 60188 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHMP4B-CBFA2T2 CHMP4B chr20 32399464 - CBFA2T2 chr20 32194762 + Exonic hg19 STAD TCGA-CG-4449-01A 28 15 In-Frame Intra-chr q11.22 q11.21 Seq+ 60189 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHMP4B-CBFA2T2 CHMP4B chr20 32399464 - CBFA2T2 chr20 32224446 + Exonic hg19 LIHC TCGA-FV-A496-01A 4 9 In-Frame Intra-chr q11.22 q11.21 Seq+ 60190 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHMP5-VMP1 CHMP5 chr9 33266112 - VMP1 chr17 57886157 + Exonic hg19 BRCA TCGA-E2-A15H-01A 31 66 In-Frame Inter-chr p13.3 q23.1 Seq+ 60191 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHN1-TSGA10 CHN1 chr2 175869622 - TSGA10 chr2 99734222 - Exonic hg19 BRCA TCGA-A8-A08L-01A 2 1 CDS-5'UTR Intra-chr q31.1 q11.2 60192 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHPT1-ATXN2 CHPT1 chr12 102091912 - ATXN2 chr12 111948386 - Exonic hg19 SARC TCGA-DX-A1KW-01A 41 44 Out-of-frame Intra-chr q23.2 q24.12 Seq+ 60193 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHPT1-MYBPC1 CHPT1 chr12 102091912 - MYBPC1 chr12 102061510 + Exonic hg19 BRCA TCGA-A7-A6VY-01A 43 28 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 60194 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHPT1-TXNRD1 CHPT1 chr12 102091912 - TXNRD1 chr12 104707023 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 10 6 In-Frame Intra-chr q23.2 q23.3 Seq+ 60195 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHRAC1-SNTG1 CHRAC1 chr8 141521745 - SNTG1 chr8 51351103 + Exonic hg19 BLCA TCGA-G2-A3VY-01A 2 1 In-Frame Intra-chr q24.3 q11.21 Seq+ 60196 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHRM3-CASQ1 CHRM3 chr1 239990678 - CASQ1 chr1 160162592 + Exonic hg19 LUSC TCGA-46-3765-01A 9 5 5'UTR-CDS Intra-chr q43 q23.2 Seq+ 60197 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHRM3-SYT14 CHRM3 chr1 239795586 - SYT14 chr1 210267667 + Exonic hg19 PRAD TCGA-EJ-5518-01A 11 5 5'UTR-5'UTR Intra-chr q43 q32.2 Seq+ 60198 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHRNB3-RB1CC1 CHRNB3 chr8 42565577 - RB1CC1 chr8 53558427 - Exonic hg19 BRCA TCGA-BH-A0B1-01A 45 35 Out-of-frame Intra-chr p11.21 q11.23 Tumor suppressor gene Seq+ 60199 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHST10-MAP4K4 CHST10 chr2 101019026 - MAP4K4 chr2 102440390 + Exonic hg19 HNSC TCGA-CQ-A4CH-01A 56 41 In-Frame Intra-chr q11.2 Tumor suppressor gene q11.2 Seq+ 60200 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHST11-ATP1B4 CHST11 chr12 104995769 - ATP1B4 chrX 119500380 + Exonic hg19 LAML TCGA-AB-2920-03B 17 13 In-Frame Inter-chr q23.3 q24 Seq+ 60201 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHST11-HCFC2 CHST11 chr12 104851292 - HCFC2 chr12 104459945 + Exonic hg19 HNSC TCGA-CV-7416-01A 3 4 In-Frame Intra-chr q23.3 q23.3 Seq+ 60202 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHST11-PTPRR CHST11 chr12 104995769 - PTPRR chr12 71158558 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 41 16 In-Frame Intra-chr q23.3 q15 Seq+ 60203 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHST11-RFX4 CHST11 chr12 104995769 - RFX4 chr12 107075771 + Exonic hg19 HNSC TCGA-CV-7183-01A 4 1 In-Frame Intra-chr q23.3 q23.3 Transcription factor 60204 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHST11-TXNRD1 CHST11 chr12 104995769 - TXNRD1 chr12 104732917 + Exonic hg19 HNSC TCGA-P3-A6T4-01A 6 8 In-Frame Intra-chr q23.3 q23.3 Seq+ 60205 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHST3-CDH23 CHST3 chr10 73724452 - CDH23 chr10 73571072 + Exonic hg19 LUAD TCGA-78-8662-01A 4 6 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 60206 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHST8-C19orf24 CHST8 chr19 34180297 - C19orf24 chr19 1278776 + Exonic hg19 CESC TCGA-EK-A2RJ-01A 18 11 Out-of-frame Intra-chr q13.11 p13.3 Seq+ 60207 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHST8-KCNJ15 CHST8 chr19 34180297 - KCNJ15 chr21 39668848 + Exonic hg19 LUAD TCGA-38-4632-01A 5 5 CDS-5'UTR Inter-chr q13.11 q22.13 Seq+ 60208 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHST8-PDCD5 CHST8 chr19 34113202 - PDCD5 chr19 33073101 + Exonic hg19 PRAD TCGA-EJ-A46G-01A 3 5 5'UTR-CDS Intra-chr q13.11 q13.11 Tumor suppressor gene Seq+ 60209 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHST8-ZNF146 CHST8 chr19 34113202 - ZNF146 chr19 36719650 + Exonic hg19 BRCA TCGA-UL-AAZ6-01A 2 2 5'UTR-5'UTR Intra-chr q13.11 q13.12 Transcription factor 60210 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHST9-DLGAP3 CHST9 chr18 24604080 - DLGAP3 chr1 35373038 - Exonic hg19 LUSC TCGA-85-8071-01A 11 14 CDS-5'UTR Inter-chr q11.2 p34.3 Seq+ 60211 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHST9-ZNF675 CHST9 chr18 24722653 - ZNF675 chr19 23845960 - Exonic hg19 LUSC TCGA-70-6723-01A 5 2 Out-of-frame Inter-chr q11.2 p12 Transcription factor 60212 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHSY1-PCSK6 CHSY1 chr15 101775287 - PCSK6 chr15 101983865 - Exonic hg19 LUSC TCGA-34-8456-01A 3 3 In-Frame Intra-chr q26.3 q26.3 60213 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHSY1-SPOCK2 CHSY1 chr15 101775287 - SPOCK2 chr10 73832668 - Exonic hg19 BRCA TCGA-AO-A03P-01A 14 19 In-Frame Inter-chr q26.3 q22.1 60214 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHSY3-DDX46 CHSY3 chr5 129244053 - DDX46 chr5 134130540 + Exonic hg19 LGG TCGA-P5-A72W-01A 2 1 In-Frame Intra-chr q23.3 q31.1 60215 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHSY3-NINJ2 CHSY3 chr5 129244053 - NINJ2 chr12 675344 - Exonic hg19 OV TCGA-24-1104-01A 31 58 In-Frame Inter-chr q23.3 p13.33 Seq+ 60216 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHTF8-TBC1D22A CHTF8 chr16 69165992 - TBC1D22A chr22 47569141 + Exonic hg19 PRAD TCGA-V1-A8WS-01A 24 59 5'UTR-CDS Inter-chr q22.1 q13.31 Seq+ 60217 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHTOP-S100A1 CHTOP chr1 153606819 - S100A1 chr1 153602985 + Exonic hg19 UCS TCGA-N8-A4PP-01A 663 230 5'UTR-5'UTR Intra-chr q21.3 q21.3 Seq+ 60218 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CHTOP-S100A13 CHTOP chr1 153609129 - S100A13 chr1 153604716 - Exonic hg19 BLCA TCGA-K4-A5RH-01A 236 96 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 60219 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CIAO1-TMEM127 CIAO1 chr2 96932227 - TMEM127 chr2 96920735 - Exonic hg19 OV TCGA-WR-A838-01A 13 95 In-Frame Intra-chr q11.2 q11.2 Tumor suppressor gene Seq+ 60220 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CIB2-ACSBG1 CIB2 chr15 78416047 - ACSBG1 chr15 78500444 - Exonic hg19 READ TCGA-AF-5654-01A 2 1 In-Frame Intra-chr q25.1 q25.1 Seq+ 60221 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CIC-DLK1 CIC chr19 42798456 - DLK1 chr14 101193333 + Exonic hg19 PCPG TCGA-QR-A70P-01A 2 1 Out-of-frame Inter-chr q13.2 Oncogene Tumor suppressor gene Transcription factor q32.2 Tumor suppressor gene 60222 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CIC-KLK11 CIC chr19 42793558 - KLK11 chr19 51528922 - Exonic hg19 LUAD TCGA-93-A4JN-01A 15 3 In-Frame Intra-chr q13.2 Oncogene Tumor suppressor gene Transcription factor q13.41 Seq+ 60223 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CIC-LMNA CIC chr19 42798456 - LMNA chr1 156084592 + Exonic hg19 BRCA TCGA-EW-A2FR-01A 2 7 Out-of-frame Inter-chr q13.2 Oncogene Tumor suppressor gene Transcription factor q22 60224 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CIC-ZFP57 CIC chr19 42791392 - ZFP57 chr6 29641535 - Exonic hg19 BRCA TCGA-BH-A1F0-01A 12 17 Out-of-frame Inter-chr q13.2 Oncogene Tumor suppressor gene Transcription factor p22.1 Transcription factor Seq+ 60225 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CIDEB-ADCY4 CIDEB chr14 24776577 - ADCY4 chr14 24787984 - Exonic hg19 BLCA TCGA-CF-A1HR-01A 3 1 Out-of-frame Intra-chr q12 q12 60226 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CIITA-PRDM16 CIITA chr16 10971239 - PRDM16 chr1 3301716 + Exonic hg19 DLBC TCGA-GS-A9TZ-01A 652 347 Out-of-frame Inter-chr p13.13 p36.32 Transcription factor Seq+ 60227 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CIR1-AGPS CIR1 chr2 175216347 - AGPS chr2 178402802 + Exonic hg19 DLBC TCGA-GS-A9TY-01A 13 8 Out-of-frame Intra-chr q31.1 q31.2 Seq+ 60228 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CIR1-SCRN3 CIR1 chr2 175260279 - SCRN3 chr2 175264650 + Exonic hg19 PRAD TCGA-ZG-A9LZ-01A 29 18 In-Frame Intra-chr q31.1 q31.1 Seq+ 60229 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CIRBP-CNN2 CIRBP chr19 1269409 - CNN2 chr19 1031070 + Exonic hg19 BLCA TCGA-4Z-AA87-01A 15 4 5'UTR-CDS Intra-chr p13.3 p13.3 60230 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CISD1-GABRA1 CISD1 chr10 60029064 - GABRA1 chr5 161322672 + Exonic hg19 LUSC TCGA-66-2782-01A 19 9 In-Frame Inter-chr q21.1 q34 Seq+ 60231 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CIT-AC069214.1 CIT chr12 120189855 - AC069214.1 chr12 121204175 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 6 4 Out-of-frame Intra-chr q24.23 60232 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CIT-C12orf34 CIT chr12 120204891 - C12orf34 chr12 110181906 + Exonic hg19 LUSC TCGA-34-5232-01A 11 8 Out-of-frame Intra-chr q24.23 60233 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CIT-LYZ CIT chr12 120260624 - LYZ chr12 69743888 + Exonic hg19 SARC TCGA-3B-A9HO-01A 21 18 In-Frame Intra-chr q24.23 q15 Seq+ 60234 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CIZ1-SLC16A3 CIZ1 chr9 130938630 - SLC16A3 chr17 80193859 + Exonic hg19 SARC TCGA-IE-A3OV-01A 5 2 CDS-5'UTR Inter-chr q34.11 Tumor suppressor gene q25.3 Seq+ 60235 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CKAP2-C12orf70 CKAP2 chr13 53048219 - C12orf70 chr12 27654856 + Exonic hg19 COAD TCGA-D5-6926-01A 7 3 In-Frame Inter-chr q14.3 60236 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CKAP5-DAAM1 CKAP5 chr11 46842726 - DAAM1 chr14 59797927 + Exonic hg19 SKCM TCGA-EE-A2A6-06A 6 3 In-Frame Inter-chr p11.2 q23.1 Seq+ 60237 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CKAP5-TMEM135 CKAP5 chr11 46797805 - TMEM135 chr11 86778736 + Exonic hg19 LGG TCGA-FG-5963-01A 8 2 In-Frame Intra-chr p11.2 q14.2 Seq+ 60238 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CKAP5-TMEM135 CKAP5 chr11 46797805 - TMEM135 chr11 86778736 + Exonic hg19 LGG TCGA-FG-5963-02A 59 10 In-Frame Intra-chr p11.2 q14.2 Seq+ 60239 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CKAP5-VMP1 CKAP5 chr11 46780473 - VMP1 chr17 57842332 + Exonic hg19 BRCA TCGA-AC-A23H-01A 93 82 In-Frame Inter-chr p11.2 q23.1 Seq+ 60240 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CKB-EIF2AK2 CKB chr14 103986004 - EIF2AK2 chr2 37342384 - Exonic hg19 LGG TCGA-DU-6404-01A 2 1 Out-of-frame Inter-chr q32.33 p22.2 60241 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CKB-SCN2A CKB chr14 103986004 - SCN2A chr2 166150541 + Exonic hg19 LGG TCGA-FG-8189-01B 2 27 Out-of-frame Inter-chr q32.33 q24.3 60242 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CKB-SUPT16H CKB chr14 103986004 - SUPT16H chr14 21829491 - Exonic hg19 COAD TCGA-F4-6463-01A 2 119 Out-of-frame Intra-chr q32.33 q11.2 60243 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CKM-SIAE CKM chr19 45809672 - SIAE chr11 124543777 - Exonic hg19 HNSC TCGA-CV-5971-01A 2 30 3'UTR-5'UTR Inter-chr q13.32 q24.2 60244 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CKS2-PCSK5 CKS2 chr9 91930212 - PCSK5 chr9 78789902 + Exonic hg19 LGG TCGA-E1-5304-01A 7 8 In-Frame Intra-chr q22.2 q21.13 Seq+ 60245 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLASP1-FBXO11 CLASP1 chr2 122363277 - FBXO11 chr2 48047595 - Exonic hg19 CHOL TCGA-4G-AAZO-01A 4 4 Out-of-frame Intra-chr q14.3 p16.3 Seq+ 60246 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLASP2-NMNAT3 CLASP2 chr3 33686249 - NMNAT3 chr3 139297897 - Exonic hg19 PRAD TCGA-VP-A875-01A 7 3 CDS-5'UTR Intra-chr p22.3 q23 Seq+ 60247 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLASP2-STT3B CLASP2 chr3 33725851 - STT3B chr3 31617888 + Exonic hg19 SARC TCGA-LI-A9QH-01A 5 2 In-Frame Intra-chr p22.3 p23 Seq+ 60248 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLASRP-RELB CLASRP chr19 45562622 - RELB chr19 45537502 + Exonic hg19 BRCA TCGA-A2-A0D0-01A 12 22 Out-of-frame Intra-chr q13.32 q13.32 Transcription factor Seq+ 60249 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLASRP-TMEM217 CLASRP chr19 45563885 - TMEM217 chr6 37186817 - Exonic hg19 LIHC TCGA-DD-A73F-01A 11 5 CDS-5'UTR Inter-chr q13.32 p21.2 Seq+ 60250 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLASRP-ZNF524 CLASRP chr19 45556435 - ZNF524 chr19 56113441 + Exonic hg19 KIRP TCGA-F9-A4JJ-01A 11 7 CDS-5'UTR Intra-chr q13.32 q13.42 Transcription factor Seq+ 60251 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLCF1-PPP1CA CLCF1 chr11 67140995 - PPP1CA chr11 67168670 - Exonic hg19 KIRP TCGA-BQ-5890-01A 98 52 In-Frame Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 60252 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLCF1-PPP1CA CLCF1 chr11 67140995 - PPP1CA chr11 67168670 - Exonic hg19 LUSC TCGA-NC-A5HK-01A 23 4 In-Frame Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 60253 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLCN3-PALLD CLCN3 chr4 170557239 - PALLD chr4 169589341 + Exonic hg19 STAD TCGA-VQ-A92D-01A 2 23 Out-of-frame Intra-chr q33 q32.3 Seq+ 60254 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLCN3-SMAD1 CLCN3 chr4 170557239 - SMAD1 chr4 146474936 + Exonic hg19 BRCA TCGA-AN-A04C-01A 49 50 In-Frame Intra-chr q33 q31.21 Transcription factor Seq+ 60255 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLCN3-TDO2 CLCN3 chr4 170601358 - TDO2 chr4 156838547 + Exonic hg19 BLCA TCGA-PQ-A6FI-01A 15 19 Out-of-frame Intra-chr q33 q32.1 Seq+ 60256 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLCN3-UBE2D3 CLCN3 chr4 170557239 - UBE2D3 chr4 103731012 - Exonic hg19 BRCA TCGA-AR-A2LR-01A 4 6 Out-of-frame Intra-chr q33 q24 Seq+ 60257 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLCN4-SHROOM2 CLCN4 chrX 10155654 - SHROOM2 chrX 9841692 + Exonic hg19 UCS TCGA-N8-A56S-01A 8 6 Out-of-frame Intra-chr p22.2 p22.2 Seq+ 60258 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLCN4-TFAP2A CLCN4 chrX 10126591 - TFAP2A chr6 10398938 - Exonic hg19 LUSC TCGA-56-8307-01A 64 26 5'UTR-CDS Inter-chr p22.2 p24.3 Tumor suppressor gene Transcription factor Seq+ 60259 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLCN5-PAGE1 CLCN5 chrX 49689924 - PAGE1 chrX 49455977 - Exonic hg19 STAD TCGA-VQ-AA6J-01A 5 27 In-Frame Intra-chr p11.23 p11.23 Seq+ 60260 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLCN6-RAF1 CLCN6 chr1 11867247 - RAF1 chr3 12641914 - Exonic hg19 SKCM TCGA-ER-A19L-06A 69 62 In-Frame Inter-chr p36.22 p25.2 TKL:RAF Oncogene Seq+ 60261 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLCN7-IFT140 CLCN7 chr16 1500498 - IFT140 chr16 1614163 - Exonic hg19 SKCM TCGA-W3-AA1V-06B 5 3 Out-of-frame Intra-chr p13.3 p13.3 60262 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLCN7-SEC63 CLCN7 chr16 1495345 - SEC63 chr6 108214782 - Exonic hg19 SKCM TCGA-GN-A26D-06A 2 2 Out-of-frame Inter-chr p13.3 q21 60263 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLDN10-TTC12 CLDN10 chr13 96212717 - TTC12 chr11 113220795 + Exonic hg19 HNSC TCGA-CR-6467-01A 2 4 In-Frame Inter-chr q32.1 q23.2 Seq+ 60264 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLDN12-SPCS3 CLDN12 chr7 90045268 - SPCS3 chr4 177243321 + Exonic hg19 PRAD TCGA-EJ-7783-01A 2 6 3'UTR-CDS Inter-chr q21.13 q34.2 60265 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLDN4-UTRN CLDN4 chr7 73247014 - UTRN chr6 144665237 + Exonic hg19 LUAD TCGA-78-7148-01A 2 3 Out-of-frame Inter-chr q11.23 q24.2 60266 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLDN7-C17orf61 CLDN7 chr17 7165140 - C17orf61 chr17 7307008 - Exonic hg19 OV TCGA-VG-A8LO-01A 21 50 In-Frame Intra-chr p13.1 60267 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLDND1-ARPP21 CLDND1 chr3 98241693 - ARPP21 chr3 35721279 + Exonic hg19 MESO TCGA-TS-A7P3-01A 3 14 5'UTR-5'UTR Intra-chr q11.2 p22.3 Seq+ 60268 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLEC12A-CLEC2A CLEC12A chr12 10124286 - CLEC2A chr12 10069402 - Exonic hg19 PRAD TCGA-EJ-7788-01A 2 3 Out-of-frame Intra-chr p13.31 p13.31 Seq+ 60269 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLEC16A-GRIN2A CLEC16A chr16 11154879 - GRIN2A chr16 10032408 - Exonic hg19 BRCA TCGA-S3-AA0Z-01A 2 4 Out-of-frame Intra-chr p13.13 p13.2 Tumor suppressor gene Seq+ 60270 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLEC16A-LITAF CLEC16A chr16 11220003 - LITAF chr16 11650591 - Exonic hg19 BRCA TCGA-D8-A13Y-01A 20 10 CDS-5'UTR Intra-chr p13.13 p13.13 Tumor suppressor gene Seq+ 60271 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLEC16A-LITAF CLEC16A chr16 11154879 - LITAF chr16 11650591 - Exonic hg19 CESC TCGA-MA-AA3Z-01A 13 7 CDS-5'UTR Intra-chr p13.13 p13.13 Tumor suppressor gene Seq+ 60272 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLEC16A-NTAN1 CLEC16A chr16 11038654 - NTAN1 chr16 15141777 - Exonic hg19 UCEC TCGA-AJ-A23N-01A 2 1 Out-of-frame Intra-chr p13.13 p13.11 60273 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLEC16A-TXNDC11 CLEC16A chr16 11076848 - TXNDC11 chr16 11778101 - Exonic hg19 GBM TCGA-41-5651-01A 2 11 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 60274 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLEC2B-C12orf28 CLEC2B chr12 10021804 - C12orf28 chr12 70345893 + Exonic hg19 SARC TCGA-3B-A9HL-01A 34 22 Out-of-frame Intra-chr p13.31 60275 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLEC2D-ERC1 CLEC2D chr12 9840682 - ERC1 chr12 1136914 + Exonic hg19 PAAD TCGA-3A-A9I9-01A 2 1 5'UTR-5'UTR Intra-chr p13.31 60276 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLIC1-HIST1H2BC CLIC1 chr6 31701343 - HIST1H2BC chr6 26115363 - Exonic hg19 BRCA TCGA-AR-A2LR-01A 8 19 CDS-3'UTR Intra-chr p22.2 Seq+ 60277 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLIC2-MAMLD1 CLIC2 chrX 154563680 - MAMLD1 chrX 149638017 + Exonic hg19 SARC TCGA-DX-A1KX-01A 7 6 In-Frame Intra-chr q28 q28 Seq+ 60278 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLIC2-VPS39 CLIC2 chrX 154563680 - VPS39 chr15 42470536 - Exonic hg19 LUAD TCGA-67-3771-01A 49 15 Out-of-frame Inter-chr q28 q15.1 Seq+ 60279 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLIC4-ARFGAP3 CLIC4 chr1 25072116 - ARFGAP3 chr22 43243638 - Exonic hg19 LIHC TCGA-PD-A5DF-01A 29 19 In-Frame Inter-chr p36.11 q13.2 Seq+ 60280 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLIC4-C1orf130 CLIC4 chr1 25072116 - C1orf130 chr1 24927431 + Exonic hg19 STAD TCGA-HU-8610-01A 8 27 Out-of-frame Intra-chr p36.11 60281 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLIC4-CCDC28B CLIC4 chr1 25072116 - CCDC28B chr1 32667514 + Exonic hg19 LIHC TCGA-DD-A39V-01A 174 110 CDS-5'UTR Intra-chr p36.11 p35.2 Seq+ 60282 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLIC4-GRHL3 CLIC4 chr1 25072116 - GRHL3 chr1 24671387 + Exonic hg19 LUAD TCGA-38-4630-01A 147 132 In-Frame Intra-chr p36.11 p36.11 Transcription factor Seq+ 60283 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLIC4-PLOD1 CLIC4 chr1 25140710 - PLOD1 chr1 12008033 + Exonic hg19 GBM TCGA-27-1835-01A 3 1 Out-of-frame Intra-chr p36.11 p36.22 Seq+ 60284 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLIC4-RCAN3 CLIC4 chr1 25072116 - RCAN3 chr1 24857708 + Exonic hg19 UCEC TCGA-PG-A914-01A 2 5 In-Frame Intra-chr p36.11 p36.11 60285 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLIC6-ITSN1 CLIC6 chr21 36043061 - ITSN1 chr21 35254547 + Exonic hg19 LUAD TCGA-55-7913-01B 4 2 In-Frame Intra-chr q22.12 q22.11 Seq+ 60286 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLINT1-MARCH11 CLINT1 chr5 157285938 - 2019_ 3_ 11_ chr5 16067902 - Exonic hg19 LUAD TCGA-93-7348-01A 68 43 Out-of-frame Intra-chr q33.3 p15.1 Seq+ 60287 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLINT1-UCHL3 CLINT1 chr5 157285938 - UCHL3 chr13 76134889 + Exonic hg19 SKCM TCGA-Z2-A8RT-06A 22 17 Out-of-frame Inter-chr q33.3 q22.2 Seq+ 60288 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLIP1-FKBP5 CLIP1 chr12 122907068 - FKBP5 chr6 35688325 - Exonic hg19 SARC TCGA-PC-A5DN-01A 10 22 5'UTR-5'UTR Inter-chr q24.31 p21.31 60289 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLIP1-RSRC2 CLIP1 chr12 122812494 - RSRC2 chr12 122992997 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 7 2 CDS-3'UTR Intra-chr q24.31 q24.31 Seq+ 60290 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLIP1-RSRC2 CLIP1 chr12 122907068 - RSRC2 chr12 122999774 - Exonic hg19 LIHC TCGA-BC-A216-01A 12 17 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 60291 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLIP1-RSRC2 CLIP1 chr12 122907068 - RSRC2 chr12 122992994 - Exonic hg19 SKCM TCGA-D3-A51H-06A 6 18 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 60292 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLIP1-RSRC2 CLIP1 chr12 122825300 - RSRC2 chr12 122992994 - Exonic hg19 SARC TCGA-QQ-A8VF-01A 10 8 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 60293 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLIP1-SLC24A6 CLIP1 chr12 122861936 - SLC24A6 chr12 113748160 - Exonic hg19 BRCA TCGA-A2-A0YM-01A 6 2 Out-of-frame Intra-chr q24.31 Seq+ 60294 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLIP1-TNIK CLIP1 chr12 122861936 - TNIK chr3 170908576 - Exonic hg19 STAD TCGA-BR-4369-01A 5 9 In-Frame Inter-chr q24.31 q26.31 STE:STE20 Seq+ 60295 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLIP1-ZCCHC8 CLIP1 chr12 122861936 - ZCCHC8 chr12 122968110 - Exonic hg19 HNSC TCGA-P3-A6T7-01A 2 1 In-Frame Intra-chr q24.31 q24.31 Seq+ 60296 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLIP1-ZCCHC8 CLIP1 chr12 122907068 - ZCCHC8 chr12 122967242 - Exonic hg19 BLCA TCGA-ZF-AA51-01A 3 2 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 60297 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLIP1-ZCCHC8 CLIP1 chr12 122907068 - ZCCHC8 chr12 122958822 - Exonic hg19 CESC TCGA-ZJ-AAXN-01A 23 73 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 60298 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLIP2-RORB CLIP2 chr7 73731997 - RORB chr9 77245198 + Exonic hg19 SKCM TCGA-EE-A29L-06A 2 1 In-Frame Inter-chr q11.23 q21.13 Transcription factor 60299 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLIP4-BRE CLIP4 chr2 29344387 - BRE chr2 28521205 + Exonic hg19 OV TCGA-25-1323-01A 14 2 In-Frame Intra-chr p23.2 Seq+ 60300 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLIP4-FAM179A CLIP4 chr2 29368233 - FAM179A chr2 29217591 + Exonic hg19 BRCA TCGA-D8-A1Y0-01A 11 3 CDS-5'UTR Intra-chr p23.2 Seq+ 60301 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLIP4-TMEM18 CLIP4 chr2 29344387 - TMEM18 chr2 675630 - Exonic hg19 SKCM TCGA-D3-A3CF-06A 66 63 Out-of-frame Intra-chr p23.2 p25.3 Seq+ 60302 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLK1-NAPRT1 CLK1 chr2 201719339 - NAPRT1 chr8 144660113 - Exonic hg19 ACC TCGA-OR-A5L6-01A 57 27 Out-of-frame Inter-chr q33.1 CMGC:CLK Seq+ 60303 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLK2-ASH1L CLK2 chr1 155236520 - ASH1L chr1 155313533 - Exonic hg19 LUAD TCGA-91-6836-01A 13 7 In-Frame Intra-chr q22 CMGC:CLK q22 Transcription factor Seq+ 60304 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLK2-CD244 CLK2 chr1 155239279 - CD244 chr1 160808839 - Exonic hg19 BRCA TCGA-AC-A62V-01A 19 15 Out-of-frame Intra-chr q22 CMGC:CLK q23.3 Seq+ 60305 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLK2-PPP1R12B CLK2 chr1 155242992 - PPP1R12B chr1 202457661 + Exonic hg19 STAD TCGA-HU-8610-01A 5 4 5'UTR-5'UTR Intra-chr q22 CMGC:CLK q32.1 Seq+ 60306 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLMN-EVL CLMN chr14 95786048 - EVL chr14 100551024 + Exonic hg19 BRCA TCGA-EW-A6SC-01A 67 30 Out-of-frame Intra-chr q32.13 q32.2 Seq+ 60307 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLMN-SOS2 CLMN chr14 95786048 - SOS2 chr14 50587102 - Exonic hg19 SKCM TCGA-ER-A19W-06A 7 5 In-Frame Intra-chr q32.13 q21.3 Seq+ 60308 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLMN-VTI1B CLMN chr14 95786048 - VTI1B chr14 68120215 - Exonic hg19 LIHC TCGA-CC-5263-01A 31 37 Out-of-frame Intra-chr q32.13 q24.1 Seq+ 60309 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLMN-WDR20 CLMN chr14 95786048 - WDR20 chr14 102689167 + Exonic hg19 BLCA TCGA-G2-AA3D-01A 6 3 Out-of-frame Intra-chr q32.13 q32.31 Seq+ 60310 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLN3-C15orf32 CLN3 chr16 28495327 - C15orf32 chr15 93043588 + Exonic hg19 HNSC TCGA-CR-5247-01A 11 7 Out-of-frame Inter-chr p12.1 q26.1 Seq+ 60311 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLN6-C15orf59 CLN6 chr15 68521840 - C15orf59 chr15 74032983 - Exonic hg19 LUAD TCGA-05-4395-01A 10 12 Out-of-frame Intra-chr q23 q24.1 Seq+ 60312 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLN6-FBXL17 CLN6 chr15 68521840 - FBXL17 chr5 107684231 - Exonic hg19 LUAD TCGA-05-4402-01A 2 3 Out-of-frame Inter-chr q23 q21.3 60313 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLN6-PAQR5 CLN6 chr15 68521840 - PAQR5 chr15 69629680 + Exonic hg19 BRCA TCGA-B6-A0X1-01A 2 1 CDS-5'UTR Intra-chr q23 q23 60314 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLNK-WDR70 CLNK chr4 10542118 - WDR70 chr5 37438024 + Exonic hg19 SKCM TCGA-D9-A1X3-01A 2 6 Out-of-frame Inter-chr p16.1 p13.2 Seq+ 60315 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLNK-WDR70 CLNK chr4 10542118 - WDR70 chr5 37438024 + Exonic hg19 SKCM TCGA-D9-A1X3-06A 2 6 Out-of-frame Inter-chr p16.1 p13.2 Seq+ 60316 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLNS1A-AQP11 CLNS1A chr11 77336008 - AQP11 chr11 77314601 + Exonic hg19 BRCA TCGA-D8-A27G-01A 105 84 In-Frame Intra-chr q14.1 q14.1 Seq+ 60317 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLOCK-NMU CLOCK chr4 56322064 - NMU chr4 56461578 - Exonic hg19 LUAD TCGA-55-6969-01A 5 2 CDS-3'UTR Intra-chr q12 Transcription factor q12 Seq+ 60318 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLOCK-PDGFRA CLOCK chr4 56376079 - PDGFRA chr4 55153597 + Exonic hg19 LUAD TCGA-69-7979-01A 4 2 5'UTR-CDS Intra-chr q12 Transcription factor q12 Oncogene Seq+ 60319 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLOCK-PHF21A CLOCK chr4 56319221 - PHF21A chr11 46001517 - Exonic hg19 LUAD TCGA-38-4631-01A 4 2 In-Frame Inter-chr q12 Transcription factor p11.2 Transcription factor Seq+ 60320 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLOCK-SRD5A3 CLOCK chr4 56308599 - SRD5A3 chr4 56225513 + Exonic hg19 LUSC TCGA-22-5478-01A 9 6 In-Frame Intra-chr q12 Transcription factor q12 Seq+ 60321 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLOCK-UGT2A3 CLOCK chr4 56412949 - UGT2A3 chr4 69798477 - Exonic hg19 BLCA TCGA-GV-A3QH-01A 26 33 5'UTR-CDS Intra-chr q12 Transcription factor Seq+ 60322 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLPB-ARMC4 CLPB chr11 72012847 - ARMC4 chr10 28229734 - Exonic hg19 BRCA TCGA-A8-A09D-01A 14 9 In-Frame Inter-chr q13.4 p12.1 Seq+ 60323 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLPB-C2CD3 CLPB chr11 72040751 - C2CD3 chr11 73817538 - Exonic hg19 BRCA TCGA-B6-A0RL-01A 5 3 In-Frame Intra-chr q13.4 q13.4 Seq+ 60324 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLPB-CTNNA2 CLPB chr11 72091325 - CTNNA2 chr2 80620336 + Exonic hg19 PCPG TCGA-WB-A81R-01A 10 4 Out-of-frame Inter-chr q13.4 p12 Tumor suppressor gene 60325 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLPB-FCHSD2 CLPB chr11 72005369 - FCHSD2 chr11 72613683 - Exonic hg19 LUSC TCGA-94-7943-01A 8 2 In-Frame Intra-chr q13.4 q13.4 Seq+ 60326 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLPB-MTUS2 CLPB chr11 72069924 - MTUS2 chr13 29674910 + Exonic hg19 BRCA TCGA-AR-A24K-01A 10 6 In-Frame Inter-chr q13.4 q12.3 Seq+ 60327 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLPB-PTPN1 CLPB chr11 72040751 - PTPN1 chr20 49191054 + Exonic hg19 BRCA TCGA-BH-A0HL-01A 39 54 In-Frame Inter-chr q13.4 q13.13 Tumor suppressor gene Seq+ 60328 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLPB-SHANK2 CLPB chr11 72069924 - SHANK2 chr11 70544868 - Exonic hg19 BRCA TCGA-LL-A441-01A 18 12 In-Frame Intra-chr q13.4 q13.4 Seq+ 60329 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLPB-STARD10 CLPB chr11 72091325 - STARD10 chr11 72492339 - Exonic hg19 BRCA TCGA-BH-A0B9-01A 4 2 CDS-5'UTR Intra-chr q13.4 q13.4 Seq+ 60330 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLPTM1-AP1M1 CLPTM1 chr19 45458724 - AP1M1 chr19 16337232 + Exonic hg19 LUAD TCGA-55-6972-01A 5 7 In-Frame Intra-chr q13.32 p13.11 Seq+ 60331 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLPTM1-CBLC CLPTM1 chr19 45465332 - CBLC chr19 45293261 + Exonic hg19 STAD TCGA-VQ-A8P3-01A 6 56 In-Frame Intra-chr q13.32 q13.32 Seq+ 60332 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLPTM1-CEACAM16 CLPTM1 chr19 45465332 - CEACAM16 chr19 45213768 + Exonic hg19 LUSC TCGA-66-2771-01A 14 5 Out-of-frame Intra-chr q13.32 q13.31 Seq+ 60333 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLPTM1-CYP2A7 CLPTM1 chr19 45488561 - CYP2A7 chr19 41386533 - Exonic hg19 BRCA TCGA-A7-A26I-01B 31 104 Out-of-frame Intra-chr q13.32 q13.2 Seq+ 60334 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLPTM1-IGSF23 CLPTM1 chr19 45458724 - IGSF23 chr19 45127000 + Exonic hg19 LUAD TCGA-38-4632-01A 9 10 Out-of-frame Intra-chr q13.32 q13.31 60335 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLPTM1-OPA3 CLPTM1 chr19 45465332 - OPA3 chr19 46057169 - Exonic hg19 LUSC TCGA-NK-A5D1-01A 2 3 Out-of-frame Intra-chr q13.32 q13.32 Seq+ 60336 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLPTM1-PVRL2 CLPTM1 chr19 45458724 - PVRL2 chr19 45368528 + Exonic hg19 SARC TCGA-WP-A9GB-01A 10 9 Out-of-frame Intra-chr q13.32 60337 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLPTM1L-ARFGEF2 CLPTM1L chr5 1317983 - ARFGEF2 chr20 47615777 + Exonic hg19 HNSC TCGA-CN-6020-01A 2 6 Out-of-frame Inter-chr p15.33 q13.13 60338 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLPTM1L-CDHR2 CLPTM1L chr5 1341786 - CDHR2 chr5 176008344 + Exonic hg19 KIRC TCGA-BP-5175-01A 40 23 In-Frame Intra-chr p15.33 q35.2 Seq+ 60339 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLPTM1L-PDCD6 CLPTM1L chr5 1320731 - PDCD6 chr5 304292 + Exonic hg19 KIRC TCGA-BP-4991-01A 10 6 Out-of-frame Intra-chr p15.33 p15.33 Seq+ 60340 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLPTM1L-VARS CLPTM1L chr5 1338019 - VARS chr6 31763027 - Exonic hg19 SKCM TCGA-EE-A20F-06A 504 438 CDS-5'UTR Inter-chr p15.33 Seq+ 60341 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLPX-IGDCC4 CLPX chr15 65477413 - IGDCC4 chr15 65686886 - Exonic hg19 PRAD TCGA-EJ-A8FS-01A 22 13 In-Frame Intra-chr q22.31 q22.31 Seq+ 60342 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLSTN1-ANXA1 CLSTN1 chr1 9789086 - ANXA1 chr9 75772570 + Exonic hg19 PRAD TCGA-KK-A6E7-01A 2 18 Out-of-frame Inter-chr p36.22 q21.13 Tumor suppressor gene 60343 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLSTN1-CTNNBIP1 CLSTN1 chr1 9809519 - CTNNBIP1 chr1 9910834 - Exonic hg19 LUAD TCGA-55-8616-01A 62 23 In-Frame Intra-chr p36.22 p36.22 Tumor suppressor gene Seq+ 60344 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLSTN1-CTNNBIP1 CLSTN1 chr1 9833330 - CTNNBIP1 chr1 9910834 - Exonic hg19 BRCA TCGA-AR-A0TU-01A 85 105 In-Frame Intra-chr p36.22 p36.22 Tumor suppressor gene Seq+ 60345 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLSTN1-IFFO2 CLSTN1 chr1 9883701 - IFFO2 chr1 19247615 - Exonic hg19 PRAD TCGA-HC-7080-01A 2 3 Out-of-frame Intra-chr p36.22 p36.13 Seq+ 60346 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLSTN1-PLEKHG5 CLSTN1 chr1 9833330 - PLEKHG5 chr1 6537718 - Exonic hg19 LUAD TCGA-MP-A4SW-01A 4 3 Out-of-frame Intra-chr p36.22 p36.31 Oncogene 60347 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLSTN3-C1S CLSTN3 chr12 7288987 - C1S chr12 7169056 + Exonic hg19 LIHC TCGA-ZP-A9CZ-01A 89 65 CDS-5'UTR Intra-chr p13.31 p13.31 Seq+ 60348 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLSTN3-LRRC23 CLSTN3 chr12 7295907 - LRRC23 chr12 7023055 + Exonic hg19 LIHC TCGA-DD-AADA-01A 334 331 In-Frame Intra-chr p13.31 p13.31 Seq+ 60349 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLSTN3-PLCZ1 CLSTN3 chr12 7295907 - PLCZ1 chr12 18837213 - Exonic hg19 BRCA TCGA-AO-A1KQ-01A 2 2 Out-of-frame Intra-chr p13.31 p12.3 60350 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLTA-UBE2R2 CLTA chr9 36204176 - UBE2R2 chr9 33911962 + Exonic hg19 GBM TCGA-28-5204-01A 19 65 In-Frame Intra-chr p13.3 p13.3 Seq+ 60351 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLTB-SIL1 CLTB chr5 175837258 - SIL1 chr5 138287573 - Exonic hg19 BRCA TCGA-B6-A0IE-01A 5 3 Out-of-frame Intra-chr q35.2 q31.2 Seq+ 60352 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLTC-CEP95 CLTC chr17 57739004 - CEP95 chr17 62532720 + Exonic hg19 COAD TCGA-CA-5254-01A 168 76 In-Frame Intra-chr q23.1 q23.3 Seq+ 60353 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLTC-DNAH17 CLTC chr17 57697534 - DNAH17 chr17 76511104 - Exonic hg19 SARC TCGA-X6-A8C2-01A 49 37 In-Frame Intra-chr q23.1 q25.3 Seq+ 60354 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLTC-ETV4 CLTC chr17 57744338 - ETV4 chr17 41613847 - Exonic hg19 PRAD TCGA-V1-A9ZR-01A 22 17 In-Frame Intra-chr q23.1 q21.31 Oncogene Transcription factor Seq+ 60355 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLTC-FAM129C CLTC chr17 57697534 - FAM129C chr19 17648185 + Exonic hg19 BRCA TCGA-AN-A0FD-01A 38 13 Out-of-frame Inter-chr q23.1 p13.11 Seq+ 60356 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLTC-OTOP3 CLTC chr17 57761117 - OTOP3 chr17 72942756 + Exonic hg19 BRCA TCGA-EW-A1J1-01A 41 34 Out-of-frame Intra-chr q23.1 q25.1 Seq+ 60357 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLTC-PTRH2 CLTC chr17 57697534 - PTRH2 chr17 57775339 - Exonic hg19 LUAD TCGA-69-7765-01A 14 6 CDS-5'UTR Intra-chr q23.1 q23.1 60358 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLTC-ROS1 CLTC chr17 57768072 - ROS1 chr6 117642557 - Exonic hg19 LUAD TCGA-44-2665-01A 53 15 In-Frame Inter-chr q23.1 q22.1 Oncogene Seq+ 60359 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLTC-USP32 CLTC chr17 57697534 - USP32 chr17 58422969 - Exonic hg19 ESCA TCGA-V5-A7RE-01A 57 154 Out-of-frame Intra-chr q23.1 q23.2 Seq+ 60360 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLU-APOL3 CLU chr8 27455513 - APOL3 chr22 36541647 - Exonic hg19 LIHC TCGA-5C-AAPD-01A 2 2 3'UTR-3'UTR Inter-chr p21.1 Tumor suppressor gene q12.3 60361 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLU-CCT5 CLU chr8 27455514 - CCT5 chr5 10250033 + Exonic hg19 KIRC TCGA-CJ-6030-01A 2 5 Out-of-frame Inter-chr p21.1 Tumor suppressor gene p15.2 60362 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLU-DDX21 CLU chr8 27455514 - DDX21 chr10 70723858 + Exonic hg19 KIRC TCGA-DV-A4VZ-01A 2 318 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q22.1 60363 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLU-EPB41L1 CLU chr8 27455514 - EPB41L1 chr20 34818077 + Exonic hg19 LIHC TCGA-DD-A73B-01A 2 2 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q11.23 60364 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLU-PPP1R12B CLU chr8 27455514 - PPP1R12B chr1 202403784 + Exonic hg19 SARC TCGA-3B-A9HU-01A 3 1 3'UTR-CDS Inter-chr p21.1 Tumor suppressor gene q32.1 60365 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLU-SEC63 CLU chr8 27455514 - SEC63 chr6 108214782 - Exonic hg19 ACC TCGA-OR-A5JF-01A 2 173 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q21 60366 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLU-SF3B2 CLU chr8 27455513 - SF3B2 chr11 65836145 + Exonic hg19 SARC TCGA-DX-A6BB-01A 2 1 3'UTR-CDS Inter-chr p21.1 Tumor suppressor gene q13.1 60367 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLUAP1-NAA60 CLUAP1 chr16 3551089 - NAA60 chr16 3529471 + Exonic hg19 PRAD TCGA-J4-A6G1-01A 6 2 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 60368 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CLYBL-UBAC2 CLYBL chr13 100425264 - UBAC2 chr13 100020041 + Exonic hg19 LUSC TCGA-77-A5GH-01A 3 2 In-Frame Intra-chr q32.3 q32.3 60369 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CMAHP-LRRC16A CMAHP chr6 25218579 - LRRC16A chr6 25581152 + Exonic hg19 LUSC TCGA-39-5029-01A 12 8 5'UTR-CDS Intra-chr p22.3 60370 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CMBL-DARS2 CMBL chr5 10307737 - DARS2 chr1 173819465 + Exonic hg19 LUSC TCGA-22-1016-01A 3 3 5'UTR-CDS Inter-chr p15.2 q25.1 Seq+ 60371 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CMC1-ERC2 CMC1 chr3 28304871 - ERC2 chr3 56207548 - Exonic hg19 LGG TCGA-S9-A7J0-01A 3 1 Out-of-frame Intra-chr p24.1 p14.3 Seq+ 60372 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CMC1-GLB1 CMC1 chr3 28304871 - GLB1 chr3 33114205 - Exonic hg19 LUAD TCGA-67-3774-01A 9 8 Out-of-frame Intra-chr p24.1 p22.3 Seq+ 60373 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CMC1-VPS37C CMC1 chr3 28283303 - VPS37C chr11 60906307 - Exonic hg19 BRCA TCGA-BH-A18J-01A 9 4 CDS-5'UTR Inter-chr p24.1 q12.2 Seq+ 60374 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CMC1-WDR72 CMC1 chr3 28304871 - WDR72 chr15 53815519 - Exonic hg19 KICH TCGA-KL-8341-01A 7 10 In-Frame Inter-chr p24.1 q21.3 Seq+ 60375 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CMIP-BCMO1 CMIP chr16 81654531 - BCMO1 chr16 81279080 + Exonic hg19 LIHC TCGA-DD-A73C-01A 4 3 Out-of-frame Intra-chr q23.2 Seq+ 60376 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CMIP-BCMO1 CMIP chr16 81479146 - BCMO1 chr16 81279080 + Exonic hg19 BLCA TCGA-FD-A3SJ-01A 16 12 Out-of-frame Intra-chr q23.2 Seq+ 60377 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CMIP-BCMO1 CMIP chr16 81479146 - BCMO1 chr16 81295741 + Exonic hg19 ACC TCGA-OR-A5LO-01A 3 7 Out-of-frame Intra-chr q23.2 Seq+ 60378 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CMIP-BCMO1 CMIP chr16 81479146 - BCMO1 chr16 81314462 + Exonic hg19 STAD TCGA-R5-A7ZE-01B 3 12 In-Frame Intra-chr q23.2 Seq+ 60379 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CMIP-CDYL2 CMIP chr16 81479146 - CDYL2 chr16 80719026 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 6 2 In-Frame Intra-chr q23.2 q23.2 Seq+ 60380 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CMIP-SUGP2 CMIP chr16 81479146 - SUGP2 chr19 19121151 - Exonic hg19 UCEC TCGA-AX-A3GI-01A 21 18 Out-of-frame Inter-chr q23.2 p13.11 Seq+ 60381 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CMIP-UBE2G1 CMIP chr16 81479146 - UBE2G1 chr17 4210418 - Exonic hg19 COAD TCGA-QL-A97D-01A 4 2 Out-of-frame Inter-chr q23.2 p13.2 Seq+ 60382 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CMPK1-SH2D1B CMPK1 chr1 47799788 - SH2D1B chr1 162372592 - Exonic hg19 BRCA TCGA-A8-A06N-01A 24 19 Out-of-frame Intra-chr p33 Oncogene q23.3 Seq+ 60383 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CMTM4-CMTM3 CMTM4 chr16 66730243 - CMTM3 chr16 66642212 + Exonic hg19 STAD TCGA-BR-8077-01A 8 58 In-Frame Intra-chr q22.1 q22.1 Tumor suppressor gene 60384 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CMTM4-DYNC1LI2 CMTM4 chr16 66657307 - DYNC1LI2 chr16 66770147 - Exonic hg19 CESC TCGA-C5-A3HF-01A 3 6 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 60385 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CMTM4-KLHL24 CMTM4 chr16 66655965 - KLHL24 chr3 183361268 + Exonic hg19 PRAD TCGA-HC-7818-01A 2 3 CDS-5'UTR Inter-chr q22.1 q27.1 Seq+ 60386 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CMTM4-TRIM40 CMTM4 chr16 66730243 - TRIM40 chr6 30113771 + Exonic hg19 STAD TCGA-R5-A805-01A 10 48 In-Frame Inter-chr q22.1 Seq+ 60387 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CMTM7-CLDN11 CMTM7 chr3 32433557 - CLDN11 chr3 170425833 + Exonic hg19 SKCM TCGA-ER-A42H-01A 9 4 Out-of-frame Intra-chr p22.3 q26.2 Seq+ 60388 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CMTM7-CMTM8 CMTM7 chr3 32433557 - CMTM8 chr3 32409364 + Exonic hg19 BLCA TCGA-XF-A9SK-01A 5 2 In-Frame Intra-chr p22.3 p22.3 60389 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CMTM8-GPD1L CMTM8 chr3 32280611 - GPD1L chr3 32169568 + Exonic hg19 LIHC TCGA-2Y-A9H0-01A 5 3 Out-of-frame Intra-chr p22.3 p22.3 60390 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CMTM8-NR1D2 CMTM8 chr3 32280611 - NR1D2 chr3 23996028 + Exonic hg19 BRCA TCGA-A2-A0ST-01A 3 4 Out-of-frame Intra-chr p22.3 p24.2 Transcription factor Seq+ 60391 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CMTM8-RAF1 CMTM8 chr3 32280611 - RAF1 chr3 12660246 - Exonic hg19 BRCA TCGA-E2-A155-01A 6 11 CDS-5'UTR Intra-chr p22.3 p25.2 TKL:RAF Oncogene Seq+ 60392 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CMTM8-RPN1 CMTM8 chr3 32280611 - RPN1 chr3 128345675 - Exonic hg19 SKCM TCGA-W3-AA1R-06A 26 28 Out-of-frame Intra-chr p22.3 q21.3 Seq+ 60393 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CMTM8-STT3B CMTM8 chr3 32280611 - STT3B chr3 31638290 + Exonic hg19 PRAD TCGA-CH-5751-01A 4 2 In-Frame Intra-chr p22.3 p23 Seq+ 60394 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNBD1-PTPN2 CNBD1 chr8 88366014 - PTPN2 chr18 12785843 - Exonic hg19 BLCA TCGA-FD-A3B5-01A 5 4 Out-of-frame Inter-chr q21.3 p11.21 Tumor suppressor gene 60395 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNBP-ALDH1L1 CNBP chr3 128902619 - ALDH1L1 chr3 125831723 - Exonic hg19 LGG TCGA-HT-7858-01A 29 10 5'UTR-CDS Intra-chr q21.3 q21.3 Seq+ 60396 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNIH2-MS4A4A CNIH2 chr11 66046008 - MS4A4A chr11 60059698 + Exonic hg19 SKCM TCGA-D9-A4Z5-01A 5 2 Out-of-frame Intra-chr q13.2 q12.2 Seq+ 60397 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNKSR1-MAN1C1 CNKSR1 chr1 26511103 - MAN1C1 chr1 26098148 + Exonic hg19 BRCA TCGA-C8-A135-01A 13 5 In-Frame Intra-chr p36.11 p36.11 Seq+ 60398 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNKSR3-FBXO5 CNKSR3 chr6 154731477 - FBXO5 chr6 153296756 - Exonic hg19 SARC TCGA-KD-A5QU-01A 3 3 In-Frame Intra-chr q25.2 q25.2 60399 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNKSR3-PLP1 CNKSR3 chr6 154831197 - PLP1 chrX 103031781 + Exonic hg19 SARC TCGA-HB-A3YV-01A 2 4 CDS-5'UTR Inter-chr q25.2 q22.2 60400 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNN1-CBS CNN1 chr19 11661138 - CBS chr21 44476011 - Exonic hg19 SARC TCGA-DX-A6BA-01A 2 278 Out-of-frame Inter-chr p13.2 Tumor suppressor gene q22.3 60401 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNN1-CCT5 CNN1 chr19 11661138 - CCT5 chr5 10250033 + Exonic hg19 PRAD TCGA-EJ-5521-01A 2 24 Out-of-frame Inter-chr p13.2 Tumor suppressor gene p15.2 60402 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNN1-FAM129B CNN1 chr19 11661138 - FAM129B chr9 130294057 - Exonic hg19 PRAD TCGA-EJ-7327-01A 2 4 3'UTR-CDS Inter-chr p13.2 Tumor suppressor gene q34.11 60403 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNN1-TPM2 CNN1 chr19 11660680 - TPM2 chr9 35689900 - Exonic hg19 SARC TCGA-WK-A8XS-01A 2 1 Out-of-frame Inter-chr p13.2 Tumor suppressor gene p13.3 60404 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNN2-C2CD4C CNN2 chr19 1031191 - C2CD4C chr19 408401 - Exonic hg19 LGG TCGA-DB-A4XH-01A 14 3 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 60405 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNN2-TTC7A CNN2 chr19 1039060 - TTC7A chr2 47201776 + Exonic hg19 LUSC TCGA-77-8143-01A 2 33 Out-of-frame Inter-chr p13.3 p21 60406 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNN2-WDR18 CNN2 chr19 1026723 - WDR18 chr19 994019 + Exonic hg19 LIHC TCGA-DD-A116-01A 154 117 In-Frame Intra-chr p13.3 p13.3 Seq+ 60407 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNN3-ALG14 CNN3 chr1 95392394 - ALG14 chr1 95448862 - Exonic hg19 GBM TCGA-26-5136-01B 26 61 In-Frame Intra-chr p21.3 p21.3 Seq+ 60408 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNN3-ALG14 CNN3 chr1 95392394 - ALG14 chr1 95448862 - Exonic hg19 LIHC TCGA-CC-5263-01A 118 86 In-Frame Intra-chr p21.3 p21.3 Seq+ 60409 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNN3-CACHD1 CNN3 chr1 95392394 - CACHD1 chr1 65047839 + Exonic hg19 SKCM TCGA-EB-A551-01A 2 1 In-Frame Intra-chr p21.3 p31.3 Seq+ 60410 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNNM2-C10orf26 CNNM2 chr10 104828479 - C10orf26 chr10 104557750 + Exonic hg19 ACC TCGA-OR-A5J7-01A 3 1 Out-of-frame Intra-chr q24.32 60411 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNNM2-NOTCH4 CNNM2 chr10 104679858 - NOTCH4 chr6 32172166 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 2 2 Out-of-frame Inter-chr q24.32 Oncogene 60412 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNNM2-SUFU CNNM2 chr10 104679858 - SUFU chr10 104375025 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 13 3 Out-of-frame Intra-chr q24.32 q24.32 Oncogene Tumor suppressor gene Seq+ 60413 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNOT1-CETP CNOT1 chr16 58663632 - CETP chr16 57003298 + Exonic hg19 OV TCGA-13-0885-01A 2 1 5'UTR-CDS Intra-chr q21 q13 Seq+ 60414 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNOT1-GOT2 CNOT1 chr16 58663632 - GOT2 chr16 58757806 - Exonic hg19 LUSC TCGA-98-A539-01A 15 5 5'UTR-CDS Intra-chr q21 q21 Seq+ 60415 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNOT1-GOT2 CNOT1 chr16 58608513 - GOT2 chr16 58757806 - Exonic hg19 BLCA TCGA-E7-A85H-01A 5 3 In-Frame Intra-chr q21 q21 Seq+ 60416 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNOT1-PRRX2 CNOT1 chr16 58619242 - PRRX2 chr9 132481510 + Exonic hg19 STAD TCGA-CD-A487-01A 8 54 Out-of-frame Inter-chr q21 q34.11 Transcription factor Seq+ 60417 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNOT1-RASSF8 CNOT1 chr16 58663632 - RASSF8 chr12 26217431 + Exonic hg19 BRCA TCGA-A1-A0SO-01A 8 8 5'UTR-CDS Inter-chr q21 p12.1 Tumor suppressor gene Seq+ 60418 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNOT1-SLC38A7 CNOT1 chr16 58663632 - SLC38A7 chr16 58706147 - Exonic hg19 KIRP TCGA-5P-A9JU-01A 2 1 5'UTR-CDS Intra-chr q21 q21 Seq+ 60419 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNOT2-FBXO4 CNOT2 chr12 70637260 - FBXO4 chr5 41929799 + Exonic hg19 SKCM TCGA-EB-A44Q-06A 3 114 5'UTR-CDS Inter-chr q15 p13.1 Seq+ 60420 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNOT2-NUP107 CNOT2 chr12 70637260 - NUP107 chr12 69090599 + Exonic hg19 BRCA TCGA-A8-A08F-01A 12 331 5'UTR-CDS Intra-chr q15 q15 Seq+ 60421 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNOT2-NUP107 CNOT2 chr12 70724249 - NUP107 chr12 69082742 + Exonic hg19 STAD TCGA-FP-7998-01A 2 20 In-Frame Intra-chr q15 q15 Seq+ 60422 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNOT2-PDE3A CNOT2 chr12 70637260 - PDE3A chr12 20709594 + Exonic hg19 BRCA TCGA-BH-A1EW-01A 3 17 5'UTR-CDS Intra-chr q15 p12.2 Seq+ 60423 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNOT2-RAB3IP CNOT2 chr12 70637260 - RAB3IP chr12 70206744 + Exonic hg19 LUAD TCGA-75-5122-01A 6 72 5'UTR-CDS Intra-chr q15 q15 Seq+ 60424 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNOT2-RAB3IP CNOT2 chr12 70704797 - RAB3IP chr12 70149164 + Exonic hg19 BRCA TCGA-AN-A0AT-01A 15 13 Out-of-frame Intra-chr q15 q15 Seq+ 60425 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNOT2-SLC45A4 CNOT2 chr12 70713144 - SLC45A4 chr8 142231864 - Exonic hg19 BRCA TCGA-A7-A4SF-01A 51 28 In-Frame Inter-chr q15 q24.3 Seq+ 60426 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNOT2-SLCO1A2 CNOT2 chr12 70672054 - SLCO1A2 chr12 21445270 - Exonic hg19 LGG TCGA-TQ-A7RH-01A 3 1 In-Frame Intra-chr q15 p12.1 Seq+ 60427 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNOT2-SRGAP1 CNOT2 chr12 70713144 - SRGAP1 chr12 64377727 + Exonic hg19 BRCA TCGA-3C-AAAU-01A 14 12 In-Frame Intra-chr q15 q14.2 Seq+ 60428 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNOT2-ZDHHC17 CNOT2 chr12 70672054 - ZDHHC17 chr12 77220688 + Exonic hg19 BLCA TCGA-XF-A9SH-01A 12 8 In-Frame Intra-chr q15 q21.2 Seq+ 60429 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNOT4-CALD1 CNOT4 chr7 135194637 - CALD1 chr7 134613505 + Exonic hg19 PAAD TCGA-HZ-A9TJ-06A 15 7 5'UTR-CDS Intra-chr q33 q33 Seq+ 60430 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNOT6-TSPAN8 CNOT6 chr5 179980471 - TSPAN8 chr12 71551567 - Exonic hg19 SARC TCGA-3B-A9HS-01A 5 5 CDS-5'UTR Inter-chr q35.3 q21.1 Seq+ 60431 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNOT8-PROL1 CNOT8 chr5 154244945 - PROL1 chr4 71275097 + Exonic hg19 UCS TCGA-NA-A4QW-01A 75 28 Out-of-frame Inter-chr q33.2 Seq+ 60432 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNP-NCALD CNP chr17 40127192 - NCALD chr8 102813898 - Exonic hg19 LGG TCGA-DB-5276-01A 2 10 Out-of-frame Inter-chr q21.2 q22.3 60433 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNPY3-CXCR5 CNPY3 chr6 42907007 - CXCR5 chr11 118754475 + Exonic hg19 LUAD TCGA-78-7539-01A 2 1 3'UTR-5'UTR Inter-chr p21.1 q23.3 60434 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNPY3-TPO CNPY3 chr6 42902336 - TPO chr2 1417252 + Exonic hg19 THCA TCGA-H2-A2K9-01A 2 10 Out-of-frame Inter-chr p21.1 60435 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNPY4-COPS6 CNPY4 chr7 99717485 - COPS6 chr7 99686913 + Exonic hg19 LUAD TCGA-44-2666-01A 2 2 In-Frame Intra-chr q22.1 q22.1 60436 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNST-LNX1 CNST chr1 246755243 - LNX1 chr4 54373636 - Exonic hg19 SKCM TCGA-ER-A197-06A 9 5 In-Frame Inter-chr q44 q12 Seq+ 60437 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNST-RAP1GAP CNST chr1 246729965 - RAP1GAP chr1 21952890 - Exonic hg19 LGG TCGA-KT-A7W1-01A 17 11 5'UTR-5'UTR Intra-chr q44 p36.12 Tumor suppressor gene Seq+ 60438 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNST-RGS7 CNST chr1 246811339 - RGS7 chr1 240990472 - Exonic hg19 LGG TCGA-HT-8108-01A 16 7 In-Frame Intra-chr q44 q43 Seq+ 60439 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNST-SMYD3 CNST chr1 246729965 - SMYD3 chr1 246518396 - Exonic hg19 PRAD TCGA-XQ-A8TB-01A 3 1 5'UTR-5'UTR Intra-chr q44 q44 Transcription factor 60440 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNTFR-C6orf211 CNTFR chr9 34589553 - C6orf211 chr6 151775683 + Exonic hg19 CESC TCGA-C5-A902-01A 2 2 5'UTR-CDS Inter-chr p13.3 60441 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNTLN-RFX3 CNTLN chr9 17226285 - RFX3 chr9 3248185 - Exonic hg19 KIRC TCGA-B0-4696-01A 18 11 Out-of-frame Intra-chr p22.2 p24.2 Transcription factor Seq+ 60442 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNTN1-TMEM117 CNTN1 chr12 41423021 - TMEM117 chr12 44770378 + Exonic hg19 SARC TCGA-QC-AA9N-01A 3 1 Out-of-frame Intra-chr q12 q12 Seq+ 60443 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNTN1-TSPAN8 CNTN1 chr12 41086394 - TSPAN8 chr12 71676599 - Exonic hg19 LUAD TCGA-49-4501-01A 159 2 Out-of-frame Intra-chr q12 q21.1 Seq+ 60444 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNTN2-PKP1 CNTN2 chr1 205022383 - PKP1 chr1 201263070 + Exonic hg19 SARC TCGA-DX-A3U6-01A 50 9 In-Frame Intra-chr q32.1 q32.1 Seq+ 60445 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNTN5-ME3 CNTN5 chr11 100126650 - ME3 chr11 86270865 - Exonic hg19 SKCM TCGA-EE-A2GR-06A 3 2 Out-of-frame Intra-chr q22.1 q14.2 60446 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNTN5-TTYH1 CNTN5 chr11 98892000 - TTYH1 chr19 54946722 + Exonic hg19 LUSC TCGA-66-2781-01A 2 2 5'UTR-CDS Inter-chr q22.1 60447 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CNTNAP2-GSTK1 CNTNAP2 chr7 146536996 - GSTK1 chr7 142960241 + Exonic hg19 PRAD TCGA-YJ-A8SW-01A 79 70 Out-of-frame Intra-chr Tumor suppressor gene q34 Seq+ 60448 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COBL-DUSP14 COBL chr7 51152863 - DUSP14 chr17 35870779 + Exonic hg19 LUAD TCGA-50-6673-01A 30 15 CDS-5'UTR Inter-chr p12.1 q12 Seq+ 60449 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COBL-SEPT14 COBL chr7 51203855 - SEPT14 chr7 55886916 - Exonic hg19 GBM TCGA-28-5208-01A 5 32 In-Frame Intra-chr p12.1 p11.2 Seq+ 60450 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COBLL1-FIGN COBLL1 chr2 165693938 - FIGN chr2 164450306 - Exonic hg19 PRAD TCGA-FC-A4JI-01A 3 3 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 60451 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COBLL1-FMNL2 COBLL1 chr2 165697666 - FMNL2 chr2 153378457 + Exonic hg19 SARC TCGA-DX-A6B8-01A 3 4 Out-of-frame Intra-chr q24.3 q23.3 Seq+ 60452 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COBLL1-NUDT15 COBLL1 chr2 165548731 - NUDT15 chr13 48615056 + Exonic hg19 LUSC TCGA-56-8629-01A 2 3 Out-of-frame Inter-chr q24.3 q14.2 60453 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COBLL1-SCN3A COBLL1 chr2 165600197 - SCN3A chr2 166043257 - Exonic hg19 LUSC TCGA-22-5485-01A 9 4 CDS-5'UTR Intra-chr q24.3 q24.3 Seq+ 60454 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COBLL1-SCN3A COBLL1 chr2 165697666 - SCN3A chr2 166027058 - Exonic hg19 BLCA TCGA-FD-A6TA-01A 16 17 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 60455 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COBLL1-SLC38A11 COBLL1 chr2 165697666 - SLC38A11 chr2 165755240 - Exonic hg19 LUSC TCGA-18-3415-01A 2 3 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 60456 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COBLL1-SLC38A11 COBLL1 chr2 165697666 - SLC38A11 chr2 165772483 - Exonic hg19 LIHC TCGA-BC-A3KG-01A 27 22 In-Frame Intra-chr q24.3 q24.3 Seq+ 60457 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COBLL1-SLC38A11 COBLL1 chr2 165697666 - SLC38A11 chr2 165796066 - Exonic hg19 HNSC TCGA-QK-A6VB-01A 7 14 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 60458 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COBLL1-SMYD3 COBLL1 chr2 165697666 - SMYD3 chr1 246093239 - Exonic hg19 LUSC TCGA-22-5474-01A 3 3 Out-of-frame Inter-chr q24.3 q44 Transcription factor Seq+ 60459 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COBRA1-EXD3 COBRA1 chr9 140151506 - EXD3 chr9 140218595 - Exonic hg19 LGG TCGA-HT-A74J-01A 20 34 In-Frame Intra-chr q34.3 60460 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COBRA1-FBXW5 COBRA1 chr9 140161798 - FBXW5 chr9 139836136 - Exonic hg19 ESCA TCGA-JY-A6FH-01A 5 16 In-Frame Intra-chr q34.3 Seq+ 60461 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COG2-PCNXL2 COG2 chr1 230814798 - PCNXL2 chr1 233275601 - Exonic hg19 BRCA TCGA-EW-A1OV-01A 3 1 Out-of-frame Intra-chr q42.2 Seq+ 60462 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COG4-MFI2 COG4 chr16 70534861 - MFI2 chr3 196753630 - Exonic hg19 UCEC TCGA-PG-A5BC-01A 18 5 Out-of-frame Inter-chr q22.1 Seq+ 60463 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COG4-PMFBP1 COG4 chr16 70546142 - PMFBP1 chr16 72188358 - Exonic hg19 SARC TCGA-WK-A8XS-01A 10 9 In-Frame Intra-chr q22.1 q22.2 Seq+ 60464 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COG4-VAC14 COG4 chr16 70524233 - VAC14 chr16 70806075 - Exonic hg19 UCEC TCGA-SL-A6J9-01A 4 3 Out-of-frame Intra-chr q22.1 q22.2 Seq+ 60465 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COG5-CBLL1 COG5 chr7 107052947 - CBLL1 chr7 107398588 + Exonic hg19 LUAD TCGA-38-4631-01A 9 2 Out-of-frame Intra-chr q22.3 Seq+ 60466 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COG5-CCDC122 COG5 chr7 107052947 - CCDC122 chr13 44449063 - Exonic hg19 PRAD TCGA-EJ-5510-01A 2 2 CDS-5'UTR Inter-chr q14.11 Seq+ 60467 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COG5-DNAH7 COG5 chr7 106964885 - DNAH7 chr2 196651895 - Exonic hg19 BRCA TCGA-A7-A3IZ-01A 4 2 Out-of-frame Inter-chr q32.3 Seq+ 60468 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COG5-DPP6 COG5 chr7 107052947 - DPP6 chr7 154519477 + Exonic hg19 BRCA TCGA-BH-A0W7-01A 15 6 In-Frame Intra-chr Seq+ 60469 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COG5-FOXP1 COG5 chr7 107188556 - FOXP1 chr3 71542706 - Exonic hg19 BLCA TCGA-ZF-AA5H-01A 3 4 CDS-5'UTR Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 60470 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COG5-FOXP2 COG5 chr7 107167682 - FOXP2 chr7 114329837 + Exonic hg19 BRCA TCGA-AC-A2QH-01B 13 6 Out-of-frame Intra-chr q31.1 Transcription factor Seq+ 60471 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COG5-TBC1D30 COG5 chr7 107167682 - TBC1D30 chr12 65221615 + Exonic hg19 PRAD TCGA-HC-7817-01B 4 2 In-Frame Inter-chr q14.3 60472 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COG6-DNAJC15 COG6 chr13 40298698 - DNAJC15 chr13 43659904 + Exonic hg19 PRAD TCGA-HC-8260-01A 3 2 Out-of-frame Intra-chr q14.11 q14.11 Seq+ 60473 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COG6-GPC5 COG6 chr13 40301685 - GPC5 chr13 93518535 + Exonic hg19 LIHC TCGA-CC-A3M9-01A 2 3 Out-of-frame Intra-chr q14.11 q31.3 Tumor suppressor gene Seq+ 60474 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COG6-LHFP COG6 chr13 40230016 - LHFP chr13 39952663 - Exonic hg19 BRCA TCGA-C8-A130-01A 2 1 Out-of-frame Intra-chr q14.11 q14.11 60475 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COG6-MAPK8 COG6 chr13 40235018 - MAPK8 chr10 49639236 + Exonic hg19 BRCA TCGA-C8-A26V-01A 7 4 Out-of-frame Inter-chr q14.11 q11.22 Oncogene Seq+ 60476 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COG6-STXBP4 COG6 chr13 40235018 - STXBP4 chr17 53108529 + Exonic hg19 READ TCGA-AG-3731-01A 3 2 In-Frame Inter-chr q14.11 q22 60477 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COIL-CA4 COIL chr17 55038136 - CA4 chr17 58232675 + Exonic hg19 BLCA TCGA-DK-A1A5-01A 10 6 Out-of-frame Intra-chr q22 q23.1 Seq+ 60478 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COIL-CDR2L COIL chr17 55038136 - CDR2L chr17 72995599 + Exonic hg19 BRCA TCGA-E2-A15H-01A 49 33 Out-of-frame Intra-chr q22 q25.1 Seq+ 60479 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL11A1-ARL5C COL11A1 chr1 103400616 - ARL5C chr17 37322870 - Exonic hg19 BRCA TCGA-OL-A5RZ-01A 3 1 CDS-5'UTR Inter-chr p21.1 q12 60480 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL14A1-DEPTOR COL14A1 chr8 121209185 - DEPTOR chr8 120940640 + Exonic hg19 LUAD TCGA-44-5644-01A 14 6 Out-of-frame Intra-chr q24.12 q24.12 Seq+ 60481 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL14A1-DEPTOR COL14A1 chr8 121160169 - DEPTOR chr8 121061815 + Exonic hg19 OV TCGA-57-1586-01A 3 12 Out-of-frame Intra-chr q24.12 q24.12 Seq+ 60482 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL14A1-DEPTOR COL14A1 chr8 121174808 - DEPTOR chr8 121061815 + Exonic hg19 OV TCGA-61-1724-01A 13 75 Out-of-frame Intra-chr q24.12 q24.12 Seq+ 60483 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL14A1-DEPTOR COL14A1 chr8 121298209 - DEPTOR chr8 120977472 + Exonic hg19 UCEC TCGA-AJ-A3I9-01A 17 13 Out-of-frame Intra-chr q24.12 q24.12 Seq+ 60484 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL14A1-DEPTOR COL14A1 chr8 121137579 - DEPTOR chr8 121061815 + Exonic hg19 UCEC TCGA-AP-A5FX-01A 7 8 5'UTR-CDS Intra-chr q24.12 q24.12 Seq+ 60485 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL14A1-DEPTOR COL14A1 chr8 121170485 - DEPTOR chr8 121013764 + Exonic hg19 UCEC TCGA-EO-A1Y7-01A 21 6 In-Frame Intra-chr q24.12 q24.12 Seq+ 60486 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL14A1-SREBF2 COL14A1 chr8 121241008 - SREBF2 chr22 42271341 + Exonic hg19 LUAD TCGA-99-AA5R-01A 5 2 Out-of-frame Inter-chr q24.12 q13.2 Transcription factor Seq+ 60487 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL16A1-ATF7IP COL16A1 chr1 32130773 - ATF7IP chr12 14576843 + Exonic hg19 BRCA TCGA-AR-A2LR-01A 7 4 CDS-5'UTR Inter-chr p35.2 p13.1 Seq+ 60488 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL16A1-CPSF6 COL16A1 chr1 32119200 - CPSF6 chr12 69663292 + Exonic hg19 HNSC TCGA-KU-A6H7-01A 81 40 CDS-3'UTR Inter-chr p35.2 q15 Seq+ 60489 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL16A1-CPSF6 COL16A1 chr1 32119200 - CPSF6 chr12 69663292 + Exonic hg19 HNSC TCGA-KU-A6H7-06A 148 76 CDS-3'UTR Inter-chr p35.2 q15 Seq+ 60490 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL17A1-WDR96 COL17A1 chr10 105803259 - WDR96 chr10 105985315 - Exonic hg19 LUSC TCGA-85-8071-01A 26 5 In-Frame Intra-chr q25.1 Seq+ 60491 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL18A1-ADARB1 COL18A1 chr21 46825388 - ADARB1 chr21 46591525 + Exonic hg19 KIRC TCGA-CJ-4635-01A 71 41 5'UTR-5'UTR Intra-chr q22.3 q22.3 Tumor suppressor gene Seq+ 60492 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL18A1-HSPA5 COL18A1 chr21 46932177 - HSPA5 chr9 128003622 - Exonic hg19 HNSC TCGA-CV-7418-01A 2 1 Out-of-frame Inter-chr q22.3 q33.3 60493 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL18A1-MYOF COL18A1 chr21 46933634 - MYOF chr10 95137186 - Exonic hg19 UCEC TCGA-DF-A2KN-01A 2 1 3'UTR-CDS Inter-chr q22.3 q23.33 60494 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL18A1-SNW1 COL18A1 chr21 46933633 - SNW1 chr14 78189203 - Exonic hg19 UCS TCGA-N6-A4VG-01A 2 22 Out-of-frame Inter-chr q22.3 q24.3 60495 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL1A2-WNT2 COL1A2 chr7 94055842 - WNT2 chr7 116937930 - Exonic hg19 BRCA TCGA-AC-A2QH-01B 2 1 In-Frame Intra-chr q21.3 q31.2 60496 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL21A1-DST COL21A1 chr6 56032922 - DST chr6 56382418 - Exonic hg19 LUSC TCGA-52-7810-01A 10 1 In-Frame Intra-chr p12.1 p12.1 Oncogene Seq+ 60497 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL21A1-EFCAB1 COL21A1 chr6 56112185 - EFCAB1 chr8 49643203 - Exonic hg19 HNSC TCGA-CR-7383-01A 2 1 5'UTR-CDS Inter-chr p12.1 q11.21 60498 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL22A1-RAD54B COL22A1 chr8 139889993 - RAD54B chr8 95423543 - Exonic hg19 KIRC TCGA-BP-5198-01A 5 1 In-Frame Intra-chr q24.3 q22.1 60499 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL23A1-FAM193B COL23A1 chr5 177987683 - FAM193B chr5 176947182 - Exonic hg19 OV TCGA-24-2024-01A 4 3 CDS-3'UTR Intra-chr q35.3 q35.3 Seq+ 60500 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL25A1-CCDC109B COL25A1 chr4 109762851 - CCDC109B chr4 110569640 + Exonic hg19 BRCA TCGA-A2-A0CL-01A 8 9 3'UTR-CDS Intra-chr q25 60501 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL27A1-C9orf43 COL27A1 chr9 117053197 - C9orf43 chr9 116181388 + Exonic hg19 UCS TCGA-NA-A4QV-01A 7 6 Out-of-frame Intra-chr q32 q32 Seq+ 60502 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL27A1-CUL9 COL27A1 chr9 116984547 - CUL9 chr6 43190517 + Exonic hg19 LIHC TCGA-FV-A495-01A 3 1 In-Frame Inter-chr q32 p21.1 60503 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL27A1-ZNF618 COL27A1 chr9 116999995 - ZNF618 chr9 116750601 + Exonic hg19 ESCA TCGA-L5-A4OS-01A 3 10 Out-of-frame Intra-chr q32 q32 Transcription factor Seq+ 60504 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL2A1-ZNF609 COL2A1 chr12 48398020 - ZNF609 chr15 64915026 + Exonic hg19 PRAD TCGA-EJ-5503-01A 3 1 Out-of-frame Inter-chr q13.11 q22.31 Transcription factor Seq+ 60505 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL3A1-ANXA1 COL3A1 chr2 189877472 - ANXA1 chr9 75772570 + Exonic hg19 CESC TCGA-EK-A2RO-01A 2 52 Out-of-frame Inter-chr q32.2 q21.13 Tumor suppressor gene 60506 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL3A1-C7 COL3A1 chr2 189877472 - C7 chr5 40954982 + Exonic hg19 LGG TCGA-HT-7882-01A 2 28 Out-of-frame Inter-chr q32.2 p13.1 Tumor suppressor gene 60507 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL3A1-CCT5 COL3A1 chr2 189877472 - CCT5 chr5 10250033 + Exonic hg19 ACC TCGA-OR-A5J8-01A 2 43 Out-of-frame Inter-chr q32.2 p15.2 60508 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL3A1-ERBB3 COL3A1 chr2 189877472 - ERBB3 chr12 56492035 + Exonic hg19 PAAD TCGA-IB-7654-01A 2 10 Out-of-frame Inter-chr q32.2 q13.2 Oncogene 60509 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL3A1-MMP14 COL3A1 chr2 189877472 - MMP14 chr14 23305829 + Exonic hg19 PAAD TCGA-IB-7891-01A 2 1 Out-of-frame Inter-chr q32.2 q11.2 60510 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL3A1-PLAT COL3A1 chr2 189877472 - PLAT chr8 42051245 - Exonic hg19 TGCT TCGA-2G-AALZ-01A 2 54 Out-of-frame Inter-chr q32.2 p11.21 60511 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL3A1-PLAT COL3A1 chr2 189877472 - PLAT chr8 42051245 - Exonic hg19 COAD TCGA-A6-5664-01A 2 25 Out-of-frame Inter-chr q32.2 p11.21 60512 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL3A1-SEC63 COL3A1 chr2 189877472 - SEC63 chr6 108214782 - Exonic hg19 UCS TCGA-NA-A5I1-01A 2 8 Out-of-frame Inter-chr q32.2 q21 60513 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL3A1-STAT6 COL3A1 chr2 189877472 - STAT6 chr12 57496773 - Exonic hg19 PAAD TCGA-2L-AAQA-01A 2 31 Out-of-frame Inter-chr q32.2 q13.3 Transcription factor 60514 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL3A1-SUPT16H COL3A1 chr2 189877472 - SUPT16H chr14 21829491 - Exonic hg19 LUAD TCGA-50-8459-01A 2 1 Out-of-frame Inter-chr q32.2 q11.2 60515 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL3A1-UTRN COL3A1 chr2 189877472 - UTRN chr6 144665237 + Exonic hg19 PAAD TCGA-IB-7651-01A 2 43 Out-of-frame Inter-chr q32.2 q24.2 60516 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL4A1-ELK3 COL4A1 chr13 110801318 - ELK3 chr12 96588323 + Exonic hg19 HNSC TCGA-CR-7382-01A 2 1 Out-of-frame Inter-chr q34 q23.1 Transcription factor 60517 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL4A1-ZNF675 COL4A1 chr13 110959291 - ZNF675 chr19 23845960 - Exonic hg19 PAAD TCGA-2J-AABP-01A 3 2 In-Frame Inter-chr q34 p12 Transcription factor Seq+ 60518 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL4A1-ZNF827 COL4A1 chr13 110801311 - ZNF827 chr4 146859787 - Exonic hg19 KIRC TCGA-BP-4986-01A 2 2 Out-of-frame Inter-chr q34 q31.22 Transcription factor 60519 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL4A2-CCT5 COL4A2 chr13 111165374 - CCT5 chr5 10250033 + Exonic hg19 READ TCGA-DY-A1DD-01A 2 14 3'UTR-5'UTR Inter-chr q34 p15.2 60520 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL4A2-EEA1 COL4A2 chr13 111165374 - EEA1 chr12 93229203 - Exonic hg19 KIRC TCGA-BP-4998-01A 2 4 3'UTR-CDS Inter-chr q34 q22 Transcription factor 60521 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL4A2-ELK3 COL4A2 chr13 111165374 - ELK3 chr12 96588323 + Exonic hg19 BLCA TCGA-FD-A3SL-01A 2 4 3'UTR-5'UTR Inter-chr q34 q23.1 Transcription factor 60522 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL4A2-NRAP COL4A2 chr13 111144524 - NRAP chr10 115348838 - Exonic hg19 HNSC TCGA-HD-8224-01A 2 1 Out-of-frame Inter-chr q34 q25.3 60523 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL4A2-NUBPL COL4A2 chr13 110960470 - NUBPL chr14 32068495 + Exonic hg19 SARC TCGA-FX-A48G-01A 2 1 In-Frame Inter-chr q34 q12 60524 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL4A3BP-ELOVL7 COL4A3BP chr5 74801807 - ELOVL7 chr5 60083258 - Exonic hg19 SKCM TCGA-DA-A3F3-06A 23 33 CDS-5'UTR Intra-chr q13.3 q12.1 Seq+ 60525 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL4A5-RGAG1 COL4A5 chrX 107683436 - RGAG1 chrX 109688381 + Exonic hg19 BRCA TCGA-A8-A085-01A 381 75 CDS-5'UTR Intra-chr q22.3 Seq+ 60526 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL4A5-RNF128 COL4A5 chrX 107829977 - RNF128 chrX 106016143 + Exonic hg19 LUSC TCGA-77-A5GH-01A 3 2 In-Frame Intra-chr q22.3 q22.3 60527 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL4A5-XRCC4 COL4A5 chrX 107683436 - XRCC4 chr5 82648944 + Exonic hg19 LUSC TCGA-43-3920-01A 2 1 Out-of-frame Inter-chr q22.3 q14.2 60528 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL5A1-DDX21 COL5A1 chr9 137736686 - DDX21 chr10 70723858 + Exonic hg19 UCS TCGA-N6-A4VG-01A 2 1 Out-of-frame Inter-chr q34.3 q22.1 60529 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL5A1-DDX21 COL5A1 chr9 137734719 - DDX21 chr10 70723858 + Exonic hg19 ACC TCGA-P6-A5OG-01A 2 4 Out-of-frame Inter-chr q34.3 q22.1 60530 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL5A1-PTGES2 COL5A1 chr9 137677894 - PTGES2 chr9 130887720 - Exonic hg19 BLCA TCGA-GD-A3OS-01A 130 98 In-Frame Intra-chr q34.3 q34.11 Seq+ 60531 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL5A1-UVRAG COL5A1 chr9 137734719 - UVRAG chr11 75694431 + Exonic hg19 LUSC TCGA-56-8201-01A 2 1 3'UTR-CDS Inter-chr q34.3 q13.5 Tumor suppressor gene 60532 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL6A1-CLCN3 COL6A1 chr21 47424962 - CLCN3 chr4 170623929 + Exonic hg19 COAD TCGA-G4-6626-01A 2 8 Out-of-frame Inter-chr q22.3 q33 60533 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL6A1-EIF2AK2 COL6A1 chr21 47424962 - EIF2AK2 chr2 37342384 - Exonic hg19 LUSC TCGA-85-8666-01A 2 42 Out-of-frame Inter-chr q22.3 p22.2 60534 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL6A1-PLAT COL6A1 chr21 47424962 - PLAT chr8 42051245 - Exonic hg19 ACC TCGA-PK-A5HA-01A 2 31 Out-of-frame Inter-chr q22.3 p11.21 60535 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL6A2-DDX27 COL6A2 chr21 47552763 - DDX27 chr20 47849303 + Exonic hg19 BLCA TCGA-GD-A3OS-01A 2 14 Out-of-frame Inter-chr q22.3 q13.13 60536 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL6A2-ELK3 COL6A2 chr21 47552763 - ELK3 chr12 96588323 + Exonic hg19 HNSC TCGA-CR-7382-01A 2 1 Out-of-frame Inter-chr q22.3 q23.1 Transcription factor 60537 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL6A2-FOXP1 COL6A2 chr21 47552763 - FOXP1 chr3 71007472 - Exonic hg19 PRAD TCGA-KK-A8IH-01A 2 2 Out-of-frame Inter-chr q22.3 p13 Oncogene Tumor suppressor gene Transcription factor 60538 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL7A1-ANXA1 COL7A1 chr3 48601506 - ANXA1 chr9 75772570 + Exonic hg19 CESC TCGA-HM-A4S6-01A 2 17 3'UTR-5'UTR Inter-chr p21.31 q21.13 Tumor suppressor gene 60539 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL7A1-SLC26A6 COL7A1 chr3 48630003 - SLC26A6 chr3 48665471 - Exonic hg19 ESCA TCGA-L5-A8NI-01A 2 6 Out-of-frame Intra-chr p21.31 p21.31 60540 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COL9A3-ELK3 COL9A3 chr20 61472511 - ELK3 chr12 96588323 + Exonic hg19 THCA TCGA-EM-A1YD-01A 2 1 Out-of-frame Inter-chr q13.33 q23.1 Transcription factor 60541 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COLEC11-SOX7 COLEC11 chr2 3652060 - SOX7 chr8 10692285 - Exonic hg19 SARC TCGA-X6-A8C6-01A 5 2 Out-of-frame Inter-chr p25.3 p23.1 Tumor suppressor gene Transcription factor Seq+ 60542 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COLEC12-CLUL1 COLEC12 chr18 357400 - CLUL1 chr18 606978 + Exonic hg19 LGG TCGA-HT-8106-01A 6 7 CDS-5'UTR Intra-chr p11.32 p11.32 Seq+ 60543 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COMMD10-DGKI COMMD10 chr5 115469875 - DGKI chr7 137076082 - Exonic hg19 BRCA TCGA-B6-A0IO-01A 3 3 In-Frame Inter-chr q23.1 q33 Seq+ 60544 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COMMD10-NUP107 COMMD10 chr5 115428397 - NUP107 chr12 69135593 + Exonic hg19 SARC TCGA-DX-AB3A-01A 27 36 In-Frame Inter-chr q23.1 q15 Seq+ 60545 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COMMD9-CD59 COMMD9 chr11 36300027 - CD59 chr11 33720060 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 97 26 CDS-3'UTR Intra-chr p13 p13 Seq+ 60546 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COMMD9-CYP19A1 COMMD9 chr11 36310912 - CYP19A1 chr15 51535147 - Exonic hg19 LIHC TCGA-BC-A10Z-01A 3 14 CDS-5'UTR Inter-chr p13 q21.2 Seq+ 60547 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COMT-YPEL1 COMT chr22 19951822 - YPEL1 chr22 22065197 - Exonic hg19 ACC TCGA-OR-A5JY-01A 48 15 CDS-5'UTR Intra-chr q11.21 q11.22 Seq+ 60548 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COMT-ZDHHC11 COMT chr22 19929420 - ZDHHC11 chr5 825366 - Exonic hg19 SKCM TCGA-EE-A184-06A 34 58 5'UTR-CDS Inter-chr q11.21 p15.33 Seq+ 60549 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COPE-TMED1 COPE chr19 19023793 - TMED1 chr19 10946029 - Exonic hg19 SARC TCGA-DX-A8BL-01A 25 29 In-Frame Intra-chr p13.11 p13.2 Seq+ 60550 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COPE-TMEM59L COPE chr19 19030032 - TMEM59L chr19 18724682 + Exonic hg19 LUAD TCGA-55-6981-01A 21 1 In-Frame Intra-chr p13.11 p13.11 Seq+ 60551 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COPG2-PODXL COPG2 chr7 130337709 - PODXL chr7 131196192 - Exonic hg19 STAD TCGA-BR-4357-01A 9 10 Out-of-frame Intra-chr q32.2 q32.3 60552 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COPS2-CTTN COPS2 chr15 49447722 - CTTN chr11 70251371 + Exonic hg19 BLCA TCGA-DK-A6B6-01A 12 8 CDS-5'UTR Inter-chr q21.1 Tumor suppressor gene q13.3 Seq+ 60553 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COPS3-TEKT3 COPS3 chr17 17163615 - TEKT3 chr17 15217547 - Exonic hg19 BRCA TCGA-AR-A5QN-01A 15 3 Out-of-frame Intra-chr p11.2 p12 Seq+ 60554 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COPZ1-GNPTAB COPZ1 chr12 54718965 - GNPTAB chr12 102190540 - Exonic hg19 SARC TCGA-DX-A3LS-01A 2 29 In-Frame Intra-chr q13.13 q23.2 Seq+ 60555 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COQ10A-OBFC2B COQ10A chr12 56663345 - OBFC2B chr12 56617368 + Exonic hg19 KIRC TCGA-AS-3777-01A 11 15 Out-of-frame Intra-chr q13.3 60556 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COQ10A-OBFC2B COQ10A chr12 56663345 - OBFC2B chr12 56617368 + Exonic hg19 LIHC TCGA-DD-A115-01A 17 15 Out-of-frame Intra-chr q13.3 60557 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COQ10A-USP5 COQ10A chr12 56663345 - USP5 chr12 6964565 + Exonic hg19 GBM TCGA-06-0129-01A 4 21 In-Frame Intra-chr q13.3 p13.31 Seq+ 60558 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COQ4-DNM1 COQ4 chr9 131085426 - DNM1 chr9 131012394 + Exonic hg19 BRCA TCGA-D8-A27H-01A 39 12 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 60559 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COQ6-ACOT4 COQ6 chr14 74428606 - ACOT4 chr14 74061753 + Exonic hg19 LUAD TCGA-05-4382-01A 2 3 In-Frame Intra-chr q24.3 q24.3 Seq+ 60560 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COQ6-FLRT1 COQ6 chr14 74417198 - FLRT1 chr11 63883691 + Exonic hg19 LGG TCGA-HT-A619-01A 18 8 CDS-5'UTR Inter-chr q24.3 q13.1 Seq+ 60561 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COQ9-CCL17 COQ9 chr16 57486848 - CCL17 chr16 57448993 + Exonic hg19 UCEC TCGA-A5-A2K4-01A 16 9 Out-of-frame Intra-chr q21 q21 Seq+ 60562 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CORO1B-TMEM134 CORO1B chr11 67210875 - TMEM134 chr11 67235563 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 3 10 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 60563 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CORO1C-ANKS1B CORO1C chr12 109125205 - ANKS1B chr12 99145300 - Exonic hg19 BRCA TCGA-AO-A0JD-01A 5 1 5'UTR-CDS Intra-chr q24.11 q23.1 Seq+ 60564 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CORO1C-C12orf42 CORO1C chr12 109072048 - C12orf42 chr12 103696337 - Exonic hg19 BRCA TCGA-C8-A12M-01A 32 39 Out-of-frame Intra-chr q24.11 q23.2 Seq+ 60565 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CORO1C-PACRG CORO1C chr12 109125205 - PACRG chr6 163735859 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 9 4 5'UTR-CDS Inter-chr q24.11 q26 Tumor suppressor gene Seq+ 60566 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CORO1C-RBFOX1 CORO1C chr12 109094900 - RBFOX1 chr16 7568149 + Exonic hg19 SARC TCGA-K1-A6RU-01A 4 9 In-Frame Inter-chr q24.11 p13.3 Seq+ 60567 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CORO1C-ZNF664 CORO1C chr12 109125205 - ZNF664 chr12 124495928 + Exonic hg19 LGG TCGA-HW-A5KL-01A 35 13 5'UTR-5'UTR Intra-chr q24.11 q24.31 Transcription factor Seq+ 60568 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CORO2A-C9orf3 CORO2A chr9 100919742 - C9orf3 chr9 97767440 + Exonic hg19 SKCM TCGA-ER-A19E-06A 4 1 In-Frame Intra-chr q22.33 q22.32 Seq+ 60569 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CORO2A-KBTBD4 CORO2A chr9 100954841 - KBTBD4 chr11 47599580 - Exonic hg19 PRAD TCGA-J4-AATZ-01A 9 3 5'UTR-5'UTR Inter-chr q22.33 p11.2 Seq+ 60570 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CORO2B-SLC22A23 CORO2B chr15 68871616 - SLC22A23 chr6 3416089 - Exonic hg19 SKCM TCGA-YD-A89C-06A 12 15 In-Frame Inter-chr q23 p25.2 Seq+ 60571 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CORO6-SLC20A2 CORO6 chr17 27945808 - SLC20A2 chr8 42275485 - Exonic hg19 SKCM TCGA-EB-A3HV-01A 4 3 In-Frame Inter-chr q11.2 p11.21 60572 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CORO7-CLEC16A CORO7 chr16 4462357 - CLEC16A chr16 11114050 + Exonic hg19 PRAD TCGA-EJ-5524-01A 10 6 In-Frame Intra-chr p13.3 p13.13 Seq+ 60573 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CORO7-GFOD2 CORO7 chr16 4455492 - GFOD2 chr16 67709956 - Exonic hg19 PRAD TCGA-YL-A8HL-01A 9 7 Out-of-frame Intra-chr p13.3 q22.1 Seq+ 60574 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CORO7-TRAF7 CORO7 chr16 4437987 - TRAF7 chr16 2213884 + Exonic hg19 LGG TCGA-TM-A84I-01A 11 9 CDS-5'UTR Intra-chr p13.3 p13.3 Oncogene Seq+ 60575 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COX10-INPP5K COX10 chr17 14063264 - INPP5K chr17 1401416 - Exonic hg19 CHOL TCGA-W5-AA31-01A 4 2 In-Frame Intra-chr p12 p13.3 60576 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COX19-HEATR2 COX19 chr7 1015064 - HEATR2 chr7 810108 + Exonic hg19 DLBC TCGA-FA-A82F-01A 3 2 In-Frame Intra-chr p22.3 Seq+ 60577 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COX6A1-PPP1R12A COX6A1 chr12 120876032 - PPP1R12A chr12 80266718 - Exonic hg19 SARC TCGA-PC-A5DN-01A 23 7 Out-of-frame Intra-chr q24.31 q21.31 Seq+ 60578 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COX6C-DDX27 COX6C chr8 100890379 - DDX27 chr20 47849303 + Exonic hg19 BRCA TCGA-D8-A1JT-01A 2 2 Out-of-frame Inter-chr q22.2 q13.13 60579 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COX6C-EIF2AK2 COX6C chr8 100890379 - EIF2AK2 chr2 37342384 - Exonic hg19 BRCA TCGA-E9-A1RD-01A 2 2 Out-of-frame Inter-chr q22.2 p22.2 60580 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COX6C-RGS22 COX6C chr8 100905867 - RGS22 chr8 101020797 - Exonic hg19 BRCA TCGA-EW-A1PD-01A 43 266 5'UTR-CDS Intra-chr q22.2 q22.2 Seq+ 60581 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COX7B2-PIP4K2A COX7B2 chr4 46911177 - PIP4K2A chr10 22898646 - Exonic hg19 LUSC TCGA-NC-A5HM-01A 3 2 5'UTR-CDS Inter-chr p12 p12.2 Seq+ 60582 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COX7C-PLEKHA5 COX7C chr5 85916583 - PLEKHA5 chr12 19441012 + Exonic hg19 SKCM TCGA-RP-A695-06A 2 2 Out-of-frame Inter-chr q14.3 p12.3 60583 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CP-SOX5 CP chr3 148939434 - SOX5 chr12 23999127 - Exonic hg19 BRCA TCGA-BH-A18V-01A 22 12 Out-of-frame Inter-chr q25.1 p12.1 Transcription factor Seq+ 60584 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CP-SOX5 CP chr3 148939434 - SOX5 chr12 23999127 - Exonic hg19 BRCA TCGA-BH-A18V-06A 32 17 Out-of-frame Inter-chr q25.1 p12.1 Transcription factor Seq+ 60585 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CP-WWTR1 CP chr3 148905839 - WWTR1 chr3 149387678 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 4 5 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 60586 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPA1-SCYL1 CPA1 chr7 130027929 - SCYL1 chr11 65293392 + Exonic hg19 PAAD TCGA-HZ-8003-01A 2 60 3'UTR-CDS Inter-chr q32.2 q13.1 Other:SCY1 Tumor suppressor gene 60587 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPAMD8-HAUS8 CPAMD8 chr19 17085907 - HAUS8 chr19 17160986 - Exonic hg19 BRCA TCGA-AO-A1KR-01A 3 4 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 60588 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPAMD8-SKAP1 CPAMD8 chr19 17049205 - SKAP1 chr17 46239931 - Exonic hg19 CESC TCGA-EA-A556-01A 5 2 In-Frame Inter-chr p13.11 q21.32 Seq+ 60589 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPB1-ANXA1 CPB1 chr3 148577970 - ANXA1 chr9 75772570 + Exonic hg19 BRCA TCGA-AR-A252-01A 2 78 Out-of-frame Inter-chr q24 q21.13 Tumor suppressor gene 60590 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPB1-AP3S2 CPB1 chr3 148577974 - AP3S2 chr15 90420656 - Exonic hg19 BRCA TCGA-EW-A2FS-01A 2 1 3'UTR-3'UTR Inter-chr q24 q26.1 60591 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPB1-ATP5G3 CPB1 chr3 148577974 - ATP5G3 chr2 176049335 - Exonic hg19 BRCA TCGA-LL-A5YM-01A 2 2 Out-of-frame Inter-chr q24 q31.1 60592 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPB1-DDX21 CPB1 chr3 148577970 - DDX21 chr10 70723858 + Exonic hg19 PAAD TCGA-IB-7654-01A 2 567 Out-of-frame Inter-chr q24 q22.1 60593 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPB1-NDUFV1 CPB1 chr3 148577970 - NDUFV1 chr11 67375697 + Exonic hg19 BRCA TCGA-AO-A0JI-01A 2 13 Out-of-frame Inter-chr q24 q13.2 60594 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPB1-SNW1 CPB1 chr3 148577970 - SNW1 chr14 78189203 - Exonic hg19 BRCA TCGA-E9-A1NE-01A 2 60 Out-of-frame Inter-chr q24 q24.3 60595 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPD-AATF CPD chr17 28748001 - AATF chr17 35376304 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 400 280 In-Frame Intra-chr q11.2 Tumor suppressor gene Seq+ 60596 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPD-HDAC5 CPD chr17 28712254 - HDAC5 chr17 42171202 - Exonic hg19 PRAD TCGA-J4-A67T-01A 87 114 In-Frame Intra-chr q11.2 Tumor suppressor gene q21.31 Seq+ 60597 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPD-ORMDL3 CPD chr17 28712254 - ORMDL3 chr17 38080478 - Exonic hg19 LUAD TCGA-69-7761-01A 30 11 CDS-5'UTR Intra-chr q11.2 Tumor suppressor gene q21.1 Seq+ 60598 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPD-PDE4D CPD chr17 28770989 - PDE4D chr5 58511794 - Exonic hg19 BLCA TCGA-XF-AAMX-01A 6 5 In-Frame Inter-chr q11.2 Tumor suppressor gene q12.1 Seq+ 60599 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPD-PIGW CPD chr17 28706744 - PIGW chr17 34892943 + Exonic hg19 PRAD TCGA-CH-5740-01A 24 21 5'UTR-5'UTR Intra-chr q11.2 Tumor suppressor gene q12 Seq+ 60600 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPD-SKAP1 CPD chr17 28712254 - SKAP1 chr17 46474147 - Exonic hg19 BRCA TCGA-C8-A273-01A 4 4 In-Frame Intra-chr q11.2 Tumor suppressor gene q21.32 Seq+ 60601 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPD-TBX2 CPD chr17 28748001 - TBX2 chr17 59485415 + Exonic hg19 BRCA TCGA-OL-A5D8-01A 8 7 In-Frame Intra-chr q11.2 Tumor suppressor gene q23.2 Transcription factor Seq+ 60602 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPD-TMEM132E CPD chr17 28712254 - TMEM132E chr17 32953146 + Exonic hg19 SARC TCGA-DX-A3M1-01A 5 2 In-Frame Intra-chr q11.2 Tumor suppressor gene q12 Seq+ 60603 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPE-ARHGEF4 CPE chr4 166419472 - ARHGEF4 chr2 131674224 + Exonic hg19 LGG TCGA-FG-7643-01A 2 2 3'UTR-5'UTR Inter-chr q32.3 q21.1 60604 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPE-PLEKHA5 CPE chr4 166419458 - PLEKHA5 chr12 19441012 + Exonic hg19 LGG TCGA-HT-7873-01B 2 2 Out-of-frame Inter-chr q32.3 p12.3 60605 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPEB1-CRTC3 CPEB1 chr15 83316607 - CRTC3 chr15 91150610 + Exonic hg19 SKCM TCGA-WE-A8ZM-06A 2 2 Out-of-frame Intra-chr q25.2 Transcription factor q26.1 Seq+ 60606 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPEB2-LDB2 CPEB2 chr4 15009210 - LDB2 chr4 16513727 - Exonic hg19 PRAD TCGA-XK-AAJA-01A 2 2 In-Frame Intra-chr p15.32 Seq+ 60607 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPEB4-STK32A CPEB4 chr5 173380275 - STK32A chr5 146750217 + Exonic hg19 LUAD TCGA-55-A491-01A 9 1 In-Frame Intra-chr q35.2 q32 60608 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPLX1-GAK CPLX1 chr4 818280 - GAK chr4 845762 - Exonic hg19 LGG TCGA-S9-A6WE-01A 22 12 In-Frame Intra-chr p16.3 p16.3 Other:NAK Seq+ 60609 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPM-AVIL CPM chr12 69326458 - AVIL chr12 58194995 - Exonic hg19 SARC TCGA-DX-A1L0-01A 2 1 Out-of-frame Intra-chr q15 q14.1 60610 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPM-BEST3 CPM chr12 69326458 - BEST3 chr12 70049593 - Exonic hg19 SARC TCGA-FX-A3NK-01A 50 36 Out-of-frame Intra-chr q15 q15 Seq+ 60611 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPM-C12orf28 CPM chr12 69326458 - C12orf28 chr12 70345893 + Exonic hg19 SARC TCGA-FX-A3NK-01A 474 271 Out-of-frame Intra-chr q15 60612 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPM-C12orf28 CPM chr12 69326458 - C12orf28 chr12 70345893 + Exonic hg19 SARC TCGA-FX-A3RE-01A 2 1 Out-of-frame Intra-chr q15 60613 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPM-C12orf28 CPM chr12 69326458 - C12orf28 chr12 70345893 + Exonic hg19 SARC TCGA-FX-A3TO-01A 2 1 Out-of-frame Intra-chr q15 60614 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPM-CCT2 CPM chr12 69279572 - CCT2 chr12 69986756 + Exonic hg19 SARC TCGA-DX-A1KU-01A 60 37 In-Frame Intra-chr q15 q15 Seq+ 60615 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPM-DNM3 CPM chr12 69326458 - DNM3 chr1 172277868 + Exonic hg19 SARC TCGA-SG-A6Z7-01A 9 2 Out-of-frame Inter-chr q15 q24.3 Seq+ 60616 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPM-GOLT1B CPM chr12 69326458 - GOLT1B chr12 21659819 + Exonic hg19 KIRC TCGA-AS-3777-01A 21 17 In-Frame Intra-chr q15 p12.1 Seq+ 60617 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPM-GOLT1B CPM chr12 69326458 - GOLT1B chr12 21659819 + Exonic hg19 LIHC TCGA-DD-A115-01A 31 13 In-Frame Intra-chr q15 p12.1 Seq+ 60618 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPM-KCNMA1 CPM chr12 69326458 - KCNMA1 chr10 78669854 - Exonic hg19 BRCA TCGA-E2-A10C-01A 7 4 In-Frame Inter-chr q15 q22.3 Seq+ 60619 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPN1-ACTR1A CPN1 chr10 101823371 - ACTR1A chr10 104245490 - Exonic hg19 LIHC TCGA-EP-A2KA-01A 5 5 Out-of-frame Intra-chr q24.2 q24.32 Seq+ 60620 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPNE1-DMD CPNE1 chr20 34246852 - DMD chrX 32408298 - Exonic hg19 LUAD TCGA-75-5146-01A 50 3 5'UTR-CDS Inter-chr q11.22 p21.1 Tumor suppressor gene 60621 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPNE1-NDUFV1 CPNE1 chr20 34213968 - NDUFV1 chr11 67375697 + Exonic hg19 COAD TCGA-A6-6651-01A 2 27 Out-of-frame Inter-chr q11.22 q13.2 60622 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPNE6-LRRC16B CPNE6 chr14 24542887 - LRRC16B chr14 24528344 + Exonic hg19 LIHC TCGA-BC-A10Y-01A 44 5 Out-of-frame Intra-chr q11.2 Seq+ 60623 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPNE8-CADM2 CPNE8 chr12 39299239 - CADM2 chr3 85851197 + Exonic hg19 LUAD TCGA-44-7670-01A 49 29 Out-of-frame Inter-chr q12 p12.1 Tumor suppressor gene Seq+ 60624 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPNE8-CILP CPNE8 chr12 39170040 - CILP chr15 65496920 - Exonic hg19 MESO TCGA-3U-A98F-01A 2 1 Out-of-frame Inter-chr q12 q22.31 60625 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPNE8-CNTN1 CPNE8 chr12 39266806 - CNTN1 chr12 41408030 + Exonic hg19 LUAD TCGA-80-5611-01A 3 4 Out-of-frame Intra-chr q12 q12 Seq+ 60626 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPNE8-MGST1 CPNE8 chr12 39155914 - MGST1 chr12 16507165 + Exonic hg19 ESCA TCGA-2H-A9GH-01A 6 24 CDS-5'UTR Intra-chr q12 p12.3 Seq+ 60627 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPNE8-PRMT8 CPNE8 chr12 39266806 - PRMT8 chr12 3649772 + Exonic hg19 SARC TCGA-DX-A240-01A 3 5 In-Frame Intra-chr q12 p13.32 Seq+ 60628 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPS1-PLCD4 CPS1 chr2 211444494 - PLCD4 chr2 219480430 + Exonic hg19 LIHC TCGA-WJ-A86L-01A 39 18 5'UTR-5'UTR Intra-chr q34 q35 Seq+ 60629 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPS1-PLEKHM3 CPS1 chr2 211481265 - PLEKHM3 chr2 208693220 - Exonic hg19 SARC TCGA-DX-AATS-01A 3 2 In-Frame Intra-chr q34 q33.3 Seq+ 60630 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPS1-SGOL2 CPS1 chr2 211515162 - SGOL2 chr2 201448172 + Exonic hg19 SARC TCGA-DX-A7EU-01A 3 1 Out-of-frame Intra-chr q34 60631 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPSF1-AHNAK CPSF1 chr8 145620650 - AHNAK chr11 62201363 - Exonic hg19 LIHC TCGA-BC-A10Y-01A 70 25 Out-of-frame Inter-chr q24.3 q12.3 Tumor suppressor gene Seq+ 60632 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPSF1-ARHGAP39 CPSF1 chr8 145634399 - ARHGAP39 chr8 145806661 - Exonic hg19 STAD TCGA-BR-8678-01A 6 38 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 60633 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPSF1-ARHGAP39 CPSF1 chr8 145634399 - ARHGAP39 chr8 145763197 - Exonic hg19 BRCA TCGA-E2-A9RU-01A 3 4 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 60634 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPSF1-VPS28 CPSF1 chr8 145624978 - VPS28 chr8 145649305 - Exonic hg19 HNSC TCGA-P3-A5QF-01A 13 8 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 60635 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPSF3L-GNB1 CPSF3L chr1 1259961 - GNB1 chr1 1724750 - Exonic hg19 UCEC TCGA-AX-A3FX-01A 9 9 In-Frame Intra-chr p36.33 Seq+ 60636 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPSF6-C17orf90 CPSF6 chr12 69656342 - C17orf90 chr17 79632614 - Exonic hg19 SARC TCGA-DX-AB37-01A 2 2 3'UTR-CDS Inter-chr q15 60637 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPSF6-CCNL2 CPSF6 chr12 69656342 - CCNL2 chr1 1326245 - Exonic hg19 LUSC TCGA-85-A513-01A 3 2 3'UTR-CDS Inter-chr q15 p36.33 Seq+ 60638 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPSF6-CCNL2 CPSF6 chr12 69656342 - CCNL2 chr1 1326245 - Exonic hg19 SARC TCGA-PC-A5DN-01A 4 3 3'UTR-CDS Inter-chr q15 p36.33 Seq+ 60639 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPSF6-COL16A1 CPSF6 chr12 69656342 - COL16A1 chr1 32118454 - Exonic hg19 HNSC TCGA-KU-A6H7-01A 216 108 3'UTR-CDS Inter-chr q15 p35.2 Seq+ 60640 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPSF6-COL16A1 CPSF6 chr12 69656342 - COL16A1 chr1 32118454 - Exonic hg19 HNSC TCGA-KU-A6H7-06A 579 390 3'UTR-CDS Inter-chr q15 p35.2 Seq+ 60641 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPSF6-COL9A1 CPSF6 chr12 69633486 - COL9A1 chr6 70926784 - Exonic hg19 SARC TCGA-FX-A2QS-01A 328 259 Out-of-frame Inter-chr q15 q13 Seq+ 60642 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPSF6-CPM CPSF6 chr12 69633486 - CPM chr12 69252851 - Exonic hg19 SARC TCGA-DX-A23T-01A 160 511 Out-of-frame Intra-chr q15 q15 Seq+ 60643 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPSF6-GRM8 CPSF6 chr12 69656342 - GRM8 chr7 126746766 - Exonic hg19 SARC TCGA-DX-A6BH-01A 18 24 3'UTR-3'UTR Inter-chr q15 q31.33 Oncogene Seq+ 60644 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPSF6-LAMA2 CPSF6 chr12 69633486 - LAMA2 chr6 129498851 + Exonic hg19 SARC TCGA-HB-A3YV-01A 28 19 Out-of-frame Inter-chr q15 q22.33 Seq+ 60645 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPSF6-MDM1 CPSF6 chr12 69656342 - MDM1 chr12 68689146 - Exonic hg19 BRCA TCGA-AN-A0FZ-01A 137 52 3'UTR-CDS Intra-chr q15 q15 Seq+ 60646 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPSF6-NAV3 CPSF6 chr12 69656342 - NAV3 chr12 78334099 + Exonic hg19 BRCA TCGA-AN-A0FZ-01A 4 3 3'UTR-CDS Intra-chr q15 q21.2 Seq+ 60647 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPSF6-NUP107 CPSF6 chr12 69656342 - NUP107 chr12 69126417 + Exonic hg19 SKCM TCGA-ER-A19G-06A 16 4 3'UTR-CDS Intra-chr q15 q15 Seq+ 60648 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPSF6-OSBPL8 CPSF6 chr12 69633486 - OSBPL8 chr12 76881398 - Exonic hg19 BRCA TCGA-A8-A0A7-01A 2 3 CDS-5'UTR Intra-chr q15 q21.2 Seq+ 60649 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPSF6-PTPRB CPSF6 chr12 69633486 - PTPRB chr12 70975082 - Exonic hg19 LGG TCGA-CS-4941-01A 1495 2042 Out-of-frame Intra-chr q15 q15 Seq+ 60650 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPSF6-SH3YL1 CPSF6 chr12 69656342 - SH3YL1 chr2 219001 - Exonic hg19 LUAD TCGA-50-5049-01A 2 1 3'UTR-CDS Inter-chr q15 p25.3 60651 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPSF6-TMTC2 CPSF6 chr12 69633486 - TMTC2 chr12 83250789 + Exonic hg19 SARC TCGA-FX-A3NK-01A 45 46 Out-of-frame Intra-chr q15 q21.31 Seq+ 60652 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPSF6-TSPAN31 CPSF6 chr12 69633486 - TSPAN31 chr12 58140372 + Exonic hg19 SARC TCGA-DX-A23Y-01A 1033 1115 In-Frame Intra-chr q15 q14.1 Seq+ 60653 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPT1A-ADAM2 CPT1A chr11 68540733 - ADAM2 chr8 39607263 - Exonic hg19 BRCA TCGA-E2-A15R-01A 70 40 In-Frame Inter-chr q13.3 Seq+ 60654 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPT1A-ANPEP CPT1A chr11 68609243 - ANPEP chr15 90328732 - Exonic hg19 KIRC TCGA-AS-3777-01A 3 25 5'UTR-CDS Inter-chr q13.3 q26.1 Seq+ 60655 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPT1A-ANPEP CPT1A chr11 68609243 - ANPEP chr15 90328732 - Exonic hg19 LIHC TCGA-DD-A115-01A 46 53 5'UTR-CDS Inter-chr q13.3 q26.1 Seq+ 60656 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPT1A-FGF3 CPT1A chr11 68609243 - FGF3 chr11 69631191 - Exonic hg19 HNSC TCGA-CQ-5323-01A 8 4 5'UTR-CDS Intra-chr q13.3 q13.3 Seq+ 60657 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPT1A-KCNG1 CPT1A chr11 68548108 - KCNG1 chr20 49628953 - Exonic hg19 BRCA TCGA-EW-A2FW-01A 24 21 CDS-5'UTR Inter-chr q13.3 q13.13 Seq+ 60658 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPT1A-LPXN CPT1A chr11 68566686 - LPXN chr11 58338186 - Exonic hg19 LUSC TCGA-94-A5I6-01A 4 3 Out-of-frame Intra-chr q13.3 q12.1 Seq+ 60659 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPT1A-MAPK8IP3 CPT1A chr11 68579905 - MAPK8IP3 chr16 1779139 + Exonic hg19 PAAD TCGA-OE-A75W-01A 2 1 Out-of-frame Inter-chr q13.3 p13.3 60660 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPT1A-MS4A18 CPT1A chr11 68579905 - MS4A18 chr11 60508503 + Exonic hg19 BRCA TCGA-E2-A572-01A 13 26 Out-of-frame Intra-chr q13.3 Seq+ 60661 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPT1A-P4HA3 CPT1A chr11 68549239 - P4HA3 chr11 74000175 - Exonic hg19 HNSC TCGA-CN-A49C-01A 5 4 Out-of-frame Intra-chr q13.3 q13.4 Seq+ 60662 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPT1A-PPFIA1 CPT1A chr11 68609243 - PPFIA1 chr11 70170508 + Exonic hg19 LIHC TCGA-DD-A4ND-01A 6 8 5'UTR-5'UTR Intra-chr q13.3 q13.3 Seq+ 60663 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPT1A-RNFT1 CPT1A chr11 68527037 - RNFT1 chr17 58031507 - Exonic hg19 ESCA TCGA-L5-A8NH-01A 14 171 In-Frame Inter-chr q13.3 q23.1 Seq+ 60664 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPT1A-SHANK2 CPT1A chr11 68609243 - SHANK2 chr11 70653276 - Exonic hg19 HNSC TCGA-CQ-5323-01A 28 23 5'UTR-CDS Intra-chr q13.3 q13.4 Seq+ 60665 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPT1B-SEC14L3 CPT1B chr22 51016204 - SEC14L3 chr22 30864683 - Exonic hg19 BRCA TCGA-C8-A27A-01A 6 1 In-Frame Intra-chr q13.33 q12.2 60666 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CPT2-SCP2 CPT2 chr1 53676991 - SCP2 chr1 53420412 + Exonic hg19 LUAD TCGA-NJ-A4YF-01A 9 2 In-Frame Intra-chr p32.3 p32.3 60667 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CR1L-C1orf116 CR1L chr1 207881608 - C1orf116 chr1 207201024 - Exonic hg19 PRAD TCGA-YL-A8SL-01B 3 3 CDS-5'UTR Intra-chr q32.2 q32.1 Seq+ 60668 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRADD-GRIP1 CRADD chr12 94072848 - GRIP1 chr12 66859202 - Exonic hg19 SARC TCGA-DX-A23R-01A 20 17 In-Frame Intra-chr q22 q14.3 Seq+ 60669 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRADD-MRPL42 CRADD chr12 94072848 - MRPL42 chr12 93894952 + Exonic hg19 STAD TCGA-BR-4357-01A 23 14 Out-of-frame Intra-chr q22 q22 Seq+ 60670 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRADD-MRPL42 CRADD chr12 94072848 - MRPL42 chr12 93894952 + Exonic hg19 STAD TCGA-D7-A6F0-01A 2 25 Out-of-frame Intra-chr q22 q22 Seq+ 60671 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRAMP1L-IFT140 CRAMP1L chr16 1664986 - IFT140 chr16 1621535 - Exonic hg19 ESCA TCGA-L5-A4OS-01A 3 17 Out-of-frame Intra-chr p13.3 Seq+ 60672 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRAMP1L-TMEM204 CRAMP1L chr16 1676167 - TMEM204 chr16 1604783 + Exonic hg19 SARC TCGA-DX-A3M2-01A 8 31 Out-of-frame Intra-chr p13.3 Seq+ 60673 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRAT-TTLL11 CRAT chr9 131859529 - TTLL11 chr9 124633027 - Exonic hg19 SARC TCGA-DX-A3M1-01A 43 24 Out-of-frame Intra-chr q34.11 q33.2 Seq+ 60674 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRB1-IGFN1 CRB1 chr1 197237612 - IGFN1 chr1 201162375 + Exonic hg19 LGG TCGA-DU-8163-01A 22 4 5'UTR-5'UTR Intra-chr q31.3 q32.1 Seq+ 60675 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRB3-SAFB CRB3 chr19 6464361 - SAFB chr19 5626416 + Exonic hg19 STAD TCGA-VQ-A92D-01A 2 4 5'UTR-5'UTR Intra-chr p13.3 p13.3 Tumor suppressor gene Transcription factor 60676 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRBN-GRM7 CRBN chr3 3209318 - GRM7 chr3 6870318 + Exonic hg19 BRCA TCGA-BH-A0HP-01A 6 2 CDS-5'UTR Intra-chr p26.2 Oncogene p26.1 Seq+ 60677 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRCP-ADAM22 CRCP chr7 65579957 - ADAM22 chr7 87704941 + Exonic hg19 CESC TCGA-C5-A7CM-01A 2 3 In-Frame Intra-chr q11.21 q21.12 Seq+ 60678 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CREB1-FASTKD2 CREB1 chr2 208435045 - FASTKD2 chr2 207651457 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 3 4 Out-of-frame Intra-chr q33.3 Oncogene Transcription factor q33.3 Seq+ 60679 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CREB1-SUCNR1 CREB1 chr2 208425884 - SUCNR1 chr3 151597640 + Exonic hg19 PRAD TCGA-M7-A720-01A 4 1 CDS-5'UTR Inter-chr q33.3 Oncogene Transcription factor q25.1 Seq+ 60680 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CREB3L2-CPA2 CREB3L2 chr7 137686350 - CPA2 chr7 129921944 + Exonic hg19 ACC TCGA-OR-A5JY-01A 73 43 In-Frame Intra-chr q33 Transcription factor q32.2 Seq+ 60681 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CREB3L2-SHANK2 CREB3L2 chr7 137686350 - SHANK2 chr11 70349036 - Exonic hg19 BRCA TCGA-C8-A1HM-01A 4 3 In-Frame Inter-chr q33 Transcription factor q13.4 Seq+ 60682 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CREB3L3-PKN3 CREB3L3 chr19 4171172 - PKN3 chr9 131467582 + Exonic hg19 LIHC TCGA-G3-A7M7-01A 19 12 In-Frame Inter-chr p13.3 Transcription factor q34.11 AGC:PKN Seq+ 60683 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CREB3L4-FCER1A CREB3L4 chr1 153941931 - FCER1A chr1 159272644 + Exonic hg19 SARC TCGA-DX-A1L2-01A 2 1 Out-of-frame Intra-chr q21.3 Transcription factor q23.2 Seq+ 60684 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CREB5-JAZF1 CREB5 chr7 28547355 - JAZF1 chr7 28031600 - Exonic hg19 SKCM TCGA-YG-AA3O-06A 3 3 Out-of-frame Intra-chr p15.1 Transcription factor p15.1 Transcription factor Seq+ 60685 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CREB5-KCNH2 CREB5 chr7 28610155 - KCNH2 chr7 150646137 - Exonic hg19 GBM TCGA-27-2528-01A 26 42 Out-of-frame Intra-chr p15.1 Transcription factor q36.1 Seq+ 60686 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CREB5-USP42 CREB5 chr7 28547355 - USP42 chr7 6196385 + Exonic hg19 BRCA TCGA-A2-A0YE-01A 10 2 Out-of-frame Intra-chr p15.1 Transcription factor p22.1 Seq+ 60687 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CREBBP-ADCY9 CREBBP chr16 3929833 - ADCY9 chr16 4016967 - Exonic hg19 BLCA TCGA-UY-A9PB-01A 4 2 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 60688 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CREBBP-ATG10 CREBBP chr16 3900298 - ATG10 chr5 81354314 + Exonic hg19 HNSC TCGA-CR-7374-01A 22 14 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene q14.1 Seq+ 60689 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CREBBP-C16orf59 CREBBP chr16 3788560 - C16orf59 chr16 2514040 + Exonic hg19 SKCM TCGA-ER-A42K-06A 8 3 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 60690 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CREBBP-CASKIN1 CREBBP chr16 3794895 - CASKIN1 chr16 2240359 - Exonic hg19 BLCA TCGA-GU-A42R-01A 48 24 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 60691 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CREBBP-GLYR1 CREBBP chr16 3900298 - GLYR1 chr16 4882913 - Exonic hg19 STAD TCGA-CG-4475-01A 3 2 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Transcription factor 60692 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CREBBP-HCN1 CREBBP chr16 3900298 - HCN1 chr5 45645710 - Exonic hg19 LUSC TCGA-60-2714-01A 57 18 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene p12 Seq+ 60693 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CREBBP-IFT140 CREBBP chr16 3860604 - IFT140 chr16 1642589 - Exonic hg19 UCEC TCGA-KP-A3VZ-01A 15 11 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 60694 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CREBBP-KAT6A CREBBP chr16 3929833 - KAT6A chr8 41792385 - Exonic hg19 LAML TCGA-AB-2910-03A 13 12 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene p11.21 Oncogene KB Pub 60695 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CREBBP-LUC7L CREBBP chr16 3828012 - LUC7L chr16 243014 - Exonic hg19 LUAD TCGA-J2-A4AG-01A 2 5 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 60696 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CREBBP-NAA60 CREBBP chr16 3929833 - NAA60 chr16 3526222 + Exonic hg19 LUSC TCGA-NC-A5HN-01A 3 2 CDS-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 60697 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CREBBP-NUBP1 CREBBP chr16 3819175 - NUBP1 chr16 10846467 + Exonic hg19 BRCA TCGA-B6-A0IA-01A 144 91 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.13 Seq+ 60698 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CREBBP-PRSS33 CREBBP chr16 3929833 - PRSS33 chr16 2836122 - Exonic hg19 LUSC TCGA-33-4587-01A 104 51 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 60699 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CREBBP-RANBP3 CREBBP chr16 3900298 - RANBP3 chr19 5941846 - Exonic hg19 UCEC TCGA-D1-A3JP-01A 13 7 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 60700 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CREBBP-SRRM2 CREBBP chr16 3929833 - SRRM2 chr16 2806335 + Exonic hg19 LGG TCGA-TM-A84I-01A 22 6 CDS-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 60701 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CREBBP-WRAP53 CREBBP chr16 3860604 - WRAP53 chr17 7591966 + Exonic hg19 SARC TCGA-HB-A2OT-01A 16 3 CDS-5'UTR Inter-chr p13.3 Oncogene Tumor suppressor gene p13.1 Seq+ 60702 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CREBBP-ZNF500 CREBBP chr16 3929833 - ZNF500 chr16 4803059 - Exonic hg19 BRCA TCGA-OL-A66I-01A 3 3 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Transcription factor Seq+ 60703 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CREBL2-GPR19 CREBL2 chr12 12765121 - GPR19 chr12 12848445 - Exonic hg19 BLCA TCGA-DK-A6AV-01A 3 2 CDS-5'UTR Intra-chr p13.1 Transcription factor p13.1 60704 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRELD1-C3orf24 CRELD1 chr3 9976601 - C3orf24 chr3 10123215 - Exonic hg19 TGCT TCGA-SN-A6IS-01A 27 12 CDS-3'UTR Intra-chr p25.3 60705 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRHR1-CENPP CRHR1 chr17 43861943 - CENPP chr9 95373596 + Exonic hg19 BRCA TCGA-A8-A06P-01A 2 1 In-Frame Inter-chr q21.31 q22.31 60706 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRHR1-SPOP CRHR1 chr17 43699407 - SPOP chr17 47700238 - Exonic hg19 UCS TCGA-N8-A56S-01A 11 41 5'UTR-5'UTR Intra-chr q21.31 q21.33 Oncogene Tumor suppressor gene Seq+ 60707 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRIM1-AFF3 CRIM1 chr2 36669878 - AFF3 chr2 100368763 - Exonic hg19 MESO TCGA-LK-A4O0-01A 2 3 Out-of-frame Intra-chr p22.2 q11.2 Oncogene Seq+ 60708 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRIM1-EEF1B2 CRIM1 chr2 36669878 - EEF1B2 chr2 207024637 + Exonic hg19 KIRC TCGA-BP-4774-01A 2 2 CDS-5'UTR Intra-chr p22.2 Seq+ 60709 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRIM1-HAAO CRIM1 chr2 36726490 - HAAO chr2 42997722 - Exonic hg19 KIRP TCGA-G7-6792-01A 18 15 Out-of-frame Intra-chr p22.2 p21 Seq+ 60710 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRIM1-TACR1 CRIM1 chr2 36749456 - TACR1 chr2 75347894 - Exonic hg19 KIRC TCGA-CJ-5681-01A 35 38 Out-of-frame Intra-chr p22.2 p12 Seq+ 60711 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRIM1-TBC1D25 CRIM1 chr2 36583766 - TBC1D25 chrX 48417285 + Exonic hg19 LUAD TCGA-L9-A743-01A 5 1 In-Frame Inter-chr p22.2 p11.23 60712 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRIP1-AP1G2 CRIP1 chr14 105955128 - AP1G2 chr14 24037279 - Exonic hg19 PAAD TCGA-YB-A89D-01A 2 7 3'UTR-5'UTR Intra-chr q32.33 q11.2 60713 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRIP2-MTA1 CRIP2 chr14 105941242 - MTA1 chr14 105935804 + Exonic hg19 ACC TCGA-OR-A5JZ-01A 11 2 In-Frame Intra-chr q32.33 q32.33 Seq+ 60714 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRIPT-BIRC6 CRIPT chr2 46846820 - BIRC6 chr2 32842792 + Exonic hg19 LUAD TCGA-50-6673-01A 3 2 Out-of-frame Intra-chr p21 p22.3 Seq+ 60715 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRISPLD1-LY96 CRISPLD1 chr8 75926337 - LY96 chr8 74922236 + Exonic hg19 BLCA TCGA-XF-A9SP-01A 2 1 Out-of-frame Intra-chr q21.13 q21.11 60716 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRISPLD1-MSC CRISPLD1 chr8 75927147 - MSC chr8 72754982 - Exonic hg19 SARC TCGA-WP-A9GB-01A 2 1 Out-of-frame Intra-chr q21.13 q13.3 Transcription factor 60717 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRISPLD2-MPZL2 CRISPLD2 chr16 84922969 - MPZL2 chr11 118125948 - Exonic hg19 SKCM TCGA-EB-A4XL-01A 26 16 CDS-3'UTR Inter-chr q24.1 q23.3 Seq+ 60718 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRK-GTF2I CRK chr17 1359171 - GTF2I chr7 74113291 + Exonic hg19 LIHC TCGA-BC-A10T-01A 4 10 In-Frame Inter-chr p13.3 q11.23 Transcription factor Seq+ 60719 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRK-STX8 CRK chr17 1359171 - STX8 chr17 9153962 - Exonic hg19 LUSC TCGA-85-A4CN-01A 10 9 In-Frame Intra-chr p13.3 p13.1 Seq+ 60720 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRKL-GRAMD4 CRKL chr22 21288532 - GRAMD4 chr22 47063993 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 2 3 In-Frame Intra-chr q11.21 Oncogene q13.31 60721 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRKL-HPS4 CRKL chr22 21288532 - HPS4 chr22 26873102 - Exonic hg19 STAD TCGA-VQ-AA6A-01A 3 3 In-Frame Intra-chr q11.21 Oncogene q12.1 60722 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRLF3-ATAD5 CRLF3 chr17 29151541 - ATAD5 chr17 29185179 + Exonic hg19 BRCA TCGA-A2-A0CY-01A 2 1 In-Frame Intra-chr q11.2 q11.2 60723 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRLF3-CRHR1 CRLF3 chr17 29151541 - CRHR1 chr17 43893829 + Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 5 5 Out-of-frame Intra-chr q11.2 q21.31 Seq+ 60724 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRLS1-CDS2 CRLS1 chr20 6012726 - CDS2 chr20 5165504 + Exonic hg19 STAD TCGA-CG-4449-01A 8 16 Out-of-frame Intra-chr p12.3 p12.3 Seq+ 60725 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRLS1-NFX1 CRLS1 chr20 5996136 - NFX1 chr9 33328579 + Exonic hg19 KIRC TCGA-BP-5199-01A 2 3 In-Frame Inter-chr p12.3 p13.3 Transcription factor Seq+ 60726 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRLS1-SEL1L2 CRLS1 chr20 5990558 - SEL1L2 chr20 13899769 - Exonic hg19 BRCA TCGA-A8-A06X-01A 2 2 Out-of-frame Intra-chr p12.3 p12.1 Seq+ 60727 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRLS1-TRMT6 CRLS1 chr20 5996136 - TRMT6 chr20 5925560 - Exonic hg19 COAD TCGA-5M-AATA-01A 11 10 In-Frame Intra-chr p12.3 p12.3 Seq+ 60728 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRP-DDX27 CRP chr1 159682079 - DDX27 chr20 47849303 + Exonic hg19 LIHC TCGA-DD-A4NB-01A 2 434 3'UTR-CDS Inter-chr q23.2 q13.13 60729 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRTAC1-CCT5 CRTAC1 chr10 99624758 - CCT5 chr5 10250033 + Exonic hg19 UVM TCGA-VD-A8KD-01A 2 17 Out-of-frame Inter-chr q24.2 p15.2 60730 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRTC1-KCNN1 CRTC1 chr19 18794638 - KCNN1 chr19 18084617 + Exonic hg19 UCEC TCGA-AJ-A3BF-01A 10 1 CDS-5'UTR Intra-chr p13.11 Oncogene p13.11 60731 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRTC1-KLHL26 CRTC1 chr19 18794638 - KLHL26 chr19 18775071 + Exonic hg19 GBM TCGA-06-0211-01B 10 12 Out-of-frame Intra-chr p13.11 Oncogene p13.11 Seq+ 60732 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRTC1-KLHL26 CRTC1 chr19 18794638 - KLHL26 chr19 18775071 + Exonic hg19 GBM TCGA-06-0211-02A 5 12 Out-of-frame Intra-chr p13.11 Oncogene p13.11 Seq+ 60733 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRTC1-LYPD4 CRTC1 chr19 18860685 - LYPD4 chr19 42343098 - Exonic hg19 LUSC TCGA-22-5478-01A 10 6 In-Frame Intra-chr p13.11 Oncogene q13.2 Seq+ 60734 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRTC2-KIAA0907 CRTC2 chr1 153930821 - KIAA0907 chr1 155887463 - Exonic hg19 BRCA TCGA-EW-A423-01A 5 1 In-Frame Intra-chr q21.3 q22 60735 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRTC3-IQGAP1 CRTC3 chr15 91083369 - IQGAP1 chr15 90982564 + Exonic hg19 SKCM TCGA-EE-A2MS-06A 14 3 Out-of-frame Intra-chr q26.1 q26.1 Seq+ 60736 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRTC3-MESP2 CRTC3 chr15 91182047 - MESP2 chr15 90321296 + Exonic hg19 UCS TCGA-NA-A4R1-01A 25 4 In-Frame Intra-chr q26.1 q26.1 Transcription factor Seq+ 60737 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRY1-HPSE2 CRY1 chr12 107486582 - HPSE2 chr10 100249953 - Exonic hg19 PRAD TCGA-EJ-5527-01A 4 2 Out-of-frame Inter-chr q23.3 q24.2 60738 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRYBG3-IL20RB CRYBG3 chr3 97600063 - IL20RB chr3 136728955 + Exonic hg19 LUSC TCGA-22-5489-01A 5 3 Out-of-frame Intra-chr q11.2 q22.3 Seq+ 60739 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRYL1-MLNR CRYL1 chr13 21099893 - MLNR chr13 49796176 + Exonic hg19 SARC TCGA-WK-A8XS-01A 10 3 Out-of-frame Intra-chr q12.11 q14.2 Seq+ 60740 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRYL1-SPACA7 CRYL1 chr13 21063509 - SPACA7 chr13 113088799 + Exonic hg19 KIRC TCGA-B0-5117-01A 5 4 Out-of-frame Intra-chr q12.11 Seq+ 60741 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CRYM-XYLT1 CRYM chr16 21314299 - XYLT1 chr16 17451907 - Exonic hg19 SARC TCGA-DX-A6YR-01A 3 6 5'UTR-CDS Intra-chr p12.3 60742 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CS-DGKD CS chr12 56693944 - DGKD chr2 234343026 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 5 2 In-Frame Inter-chr q13.3 Seq+ 60743 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CS-MUCL1 CS chr12 56685415 - MUCL1 chr12 55251977 + Exonic hg19 HNSC TCGA-DQ-7591-01A 4 5 Out-of-frame Intra-chr q13.3 q13.2 Seq+ 60744 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CS-PRIM1 CS chr12 56667371 - PRIM1 chr12 57125518 - Exonic hg19 BRCA TCGA-AO-A1KR-01A 12 4 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 60745 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSAD-ITGB7 CSAD chr12 53575010 - ITGB7 chr12 53594978 - Exonic hg19 BRCA TCGA-GM-A3XL-01A 37 13 5'UTR-5'UTR Intra-chr q13.13 q13.13 60746 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSAD-NPFF CSAD chr12 53574351 - NPFF chr12 53900926 - Exonic hg19 HNSC TCGA-P3-A6SX-01A 7 3 5'UTR-CDS Intra-chr q13.13 q13.13 Seq+ 60747 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSDA-MRPL42 CSDA chr12 10875449 - MRPL42 chr12 93894952 + Exonic hg19 PRAD TCGA-EJ-7315-01A 3 65 Out-of-frame Intra-chr q22 Seq+ 60748 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSDA-TMEM8A CSDA chr12 10862507 - TMEM8A chr16 427848 - Exonic hg19 PRAD TCGA-XQ-A8TA-01A 17 14 Out-of-frame Inter-chr p13.3 Seq+ 60749 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSDE1-DDX27 CSDE1 chr1 115259916 - DDX27 chr20 47849303 + Exonic hg19 LUAD TCGA-78-7149-01A 2 9 Out-of-frame Inter-chr p13.2 q13.13 60750 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSDE1-RBFOX1 CSDE1 chr1 115292442 - RBFOX1 chr16 7568149 + Exonic hg19 OV TCGA-31-1946-01A 4 13 5'UTR-CDS Inter-chr p13.2 p13.3 Seq+ 60751 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSE1L-ARFGEF2 CSE1L chr20 47713123 - ARFGEF2 chr20 47615777 + Exonic hg19 SKCM TCGA-DA-A1I7-06A 3 11 Out-of-frame Intra-chr q13.13 q13.13 Seq+ 60752 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSE1L-ARFGEF2 CSE1L chr20 47675085 - ARFGEF2 chr20 47648586 + Exonic hg19 KIRC TCGA-DV-5565-01A 10 11 Out-of-frame Intra-chr q13.13 q13.13 Seq+ 60753 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSE1L-ARFGEF2 CSE1L chr20 47711500 - ARFGEF2 chr20 47641850 + Exonic hg19 BRCA TCGA-E9-A1ND-01A 29 17 In-Frame Intra-chr q13.13 q13.13 Seq+ 60754 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSE1L-LETM2 CSE1L chr20 47662960 - LETM2 chr8 38245468 + Exonic hg19 BRCA TCGA-3C-AALJ-01A 5 3 5'UTR-5'UTR Inter-chr q13.13 p11.23 Seq+ 60755 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSGALNACT1-TMEM150A CSGALNACT1 chr8 19315937 - TMEM150A chr2 85826825 - Exonic hg19 PRAD TCGA-EJ-A46F-01A 18 6 Out-of-frame Inter-chr p21.3 p11.2 Seq+ 60756 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSGALNACT2-SLC16A9 CSGALNACT2 chr10 43651258 - SLC16A9 chr10 61414347 - Exonic hg19 THCA TCGA-BJ-A28Z-01A 15 6 In-Frame Intra-chr q11.21 q21.2 Seq+ 60757 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSK-C15orf27 CSK chr15 75075061 - C15orf27 chr15 76426509 + Exonic hg19 SKCM TCGA-EE-A2MR-06A 22 10 5'UTR-5'UTR Intra-chr q24.1 TK:Csk Seq+ 60758 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSMD1-C15orf41 CSMD1 chr8 4851854 - C15orf41 chr15 37100525 + Exonic hg19 LUSC TCGA-63-5131-01A 60 37 Out-of-frame Inter-chr p23.2 Tumor suppressor gene q14 Seq+ 60759 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSMD2-DNAH14 CSMD2 chr1 34498195 - DNAH14 chr1 225586222 + Exonic hg19 STAD TCGA-VQ-A922-01A 2 1 Out-of-frame Intra-chr p35.1 q42.12 60760 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSMD2-FYB CSMD2 chr1 34291298 - FYB chr5 39153706 - Exonic hg19 OV TCGA-24-1557-01A 4 1 In-Frame Inter-chr p35.1 p13.1 Seq+ 60761 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSMD2-IFI44L CSMD2 chr1 34052104 - IFI44L chr1 79102717 + Exonic hg19 BRCA TCGA-BH-A1EV-01A 4 2 Out-of-frame Intra-chr p35.1 p31.1 Seq+ 60762 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSMD2-TMEM222 CSMD2 chr1 34312485 - TMEM222 chr1 27657211 + Exonic hg19 GBM TCGA-28-2514-01A 2 7 Out-of-frame Intra-chr p35.1 p36.11 Seq+ 60763 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSMD3-ADCY8 CSMD3 chr8 114290821 - ADCY8 chr8 131964244 - Exonic hg19 SARC TCGA-DX-A3M1-01A 2 2 CDS-5'UTR Intra-chr q23.3 Oncogene q24.22 Seq+ 60764 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSMD3-RIMS2 CSMD3 chr8 113599295 - RIMS2 chr8 104955001 + Exonic hg19 BRCA TCGA-C8-A27A-01A 4 2 In-Frame Intra-chr q23.3 Oncogene q22.3 60765 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSNK1A1-ARHGEF37 CSNK1A1 chr5 148929638 - ARHGEF37 chr5 148977322 + Exonic hg19 HNSC TCGA-BB-A5HZ-01A 5 4 CDS-5'UTR Intra-chr q32 Tumor suppressor gene q32 Seq+ 60766 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSNK1A1-SCGB3A2 CSNK1A1 chr5 148929638 - SCGB3A2 chr5 147261009 + Exonic hg19 STAD TCGA-HU-A4GP-01A 5 198 Out-of-frame Intra-chr q32 Tumor suppressor gene q32 Seq+ 60767 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSNK1D-ALDH3A2 CSNK1D chr17 80231182 - ALDH3A2 chr17 19552248 + Exonic hg19 SARC TCGA-DX-A8BG-01A 4 2 CDS-5'UTR Intra-chr q25.3 p11.2 60768 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSNK1D-ASPSCR1 CSNK1D chr17 80231182 - ASPSCR1 chr17 79974817 + Exonic hg19 UCEC TCGA-A5-A7WK-01A 26 8 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 60769 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSNK1D-GSDMA CSNK1D chr17 80210310 - GSDMA chr17 38121936 + Exonic hg19 SARC TCGA-DX-A1L2-01A 5 4 CDS-5'UTR Intra-chr q25.3 q21.1 Seq+ 60770 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSNK1D-SCPEP1 CSNK1D chr17 80231182 - SCPEP1 chr17 55072868 + Exonic hg19 LUSC TCGA-66-2783-01A 47 27 Out-of-frame Intra-chr q25.3 q22 Seq+ 60771 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSNK1D-SECTM1 CSNK1D chr17 80231182 - SECTM1 chr17 80280887 - Exonic hg19 UCEC TCGA-AJ-A3EJ-01A 9 5 In-Frame Intra-chr q25.3 q25.3 Seq+ 60772 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSNK1D-SECTM1 CSNK1D chr17 80223562 - SECTM1 chr17 80280887 - Exonic hg19 COAD TCGA-AZ-6601-01A 24 25 In-Frame Intra-chr q25.3 q25.3 Seq+ 60773 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSNK1D-SECTM1 CSNK1D chr17 80231182 - SECTM1 chr17 80285168 - Exonic hg19 HNSC TCGA-CV-5440-01A 5 1 CDS-5'UTR Intra-chr q25.3 q25.3 Seq+ 60774 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSNK1E-DMC1 CSNK1E chr22 38694791 - DMC1 chr22 38958374 - Exonic hg19 UCEC TCGA-AX-A2H4-01A 28 17 In-Frame Intra-chr q13.1 q13.1 Seq+ 60775 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSNK1E-DNAL4 CSNK1E chr22 38776375 - DNAL4 chr22 39178875 - Exonic hg19 BRCA TCGA-E2-A14P-01A 5 10 5'UTR-5'UTR Intra-chr q13.1 q13.1 Seq+ 60776 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSNK1E-KDELR3 CSNK1E chr22 38776375 - KDELR3 chr22 38870528 + Exonic hg19 OV TCGA-36-1574-01A 4 2 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 60777 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSNK1E-MB CSNK1E chr22 38794443 - MB chr22 36033255 - Exonic hg19 PAAD TCGA-HZ-8005-01A 3 18 Out-of-frame Intra-chr q13.1 q12.3 Seq+ 60778 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSNK1E-PHF5A CSNK1E chr22 38710087 - PHF5A chr22 41864151 - Exonic hg19 SKCM TCGA-EE-A2ME-06A 56 48 In-Frame Intra-chr q13.1 q13.2 Seq+ 60779 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSNK1G1-MESP1 CSNK1G1 chr15 64592518 - MESP1 chr15 90293458 - Exonic hg19 SKCM TCGA-WE-A8ZM-06A 7 2 Out-of-frame Intra-chr q22.31 q26.1 Transcription factor 60780 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSNK1G2-PDE5A CSNK1G2 chr19 1969958 - PDE5A chr4 120528452 - Exonic hg19 SARC TCGA-DX-A3U5-01A 9 7 Out-of-frame Inter-chr p13.3 q26 Seq+ 60781 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSNK2B-CCT5 CSNK2B chr6 31637847 - CCT5 chr5 10250033 + Exonic hg19 UCS TCGA-ND-A4W6-01A 2 1 Out-of-frame Inter-chr p15.2 60782 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSNK2B-VARS CSNK2B chr6 31639061 - VARS chr6 31760897 - Exonic hg19 COAD TCGA-D5-6538-01A 2 1 3'UTR-CDS Intra-chr 60783 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSPG4-MYO1D CSPG4 chr15 76005009 - MYO1D chr17 31082680 - Exonic hg19 SARC TCGA-FX-A3TO-01A 3 1 Out-of-frame Inter-chr q24.2 q11.2 Seq+ 60784 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSPP1-CLVS1 CSPP1 chr8 68092161 - CLVS1 chr8 62412014 + Exonic hg19 SKCM TCGA-ER-A3EV-06A 4 4 Out-of-frame Intra-chr q13.1 q12.2 60785 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSPP1-CPA6 CSPP1 chr8 67976731 - CPA6 chr8 68346475 - Exonic hg19 PRAD TCGA-YL-A9WY-01A 87 21 Out-of-frame Intra-chr q13.1 q13.2 Seq+ 60786 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSPP1-LRRC67 CSPP1 chr8 67976731 - LRRC67 chr8 67894415 - Exonic hg19 BLCA TCGA-DK-A1A6-01A 11 3 Out-of-frame Intra-chr q13.1 60787 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSPP1-MAN1A2 CSPP1 chr8 68071372 - MAN1A2 chr1 117944808 + Exonic hg19 LUAD TCGA-78-7167-01A 12 2 Out-of-frame Inter-chr q13.1 p12 Seq+ 60788 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSRP1-PALLD CSRP1 chr1 201452662 - PALLD chr4 169418275 + Exonic hg19 SARC TCGA-DX-A48J-01A 2 1 Out-of-frame Inter-chr q32.1 q32.3 60789 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSRP2-CTD-2021H9.3 CSRP2 chr12 77272718 - CTD-2021H9.3 chr12 71441459 - Exonic hg19 SARC TCGA-DX-A3U5-01A 388 519 Out-of-frame Intra-chr q21.2 60790 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CST3-CCT5 CST3 chr20 23614294 - CCT5 chr5 10250033 + Exonic hg19 LGG TCGA-DU-6404-01A 2 11 3'UTR-5'UTR Inter-chr p11.21 p15.2 60791 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSTA-CASR CSTA chr3 122056495 - CASR chr3 121994659 + Exonic hg19 LUSC TCGA-92-8065-01A 136 90 In-Frame Intra-chr q21.1 q13.33 Seq+ 60792 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CSTF1-BLM CSTF1 chr20 54967769 - BLM chr15 91352367 + Exonic hg19 SKCM TCGA-ER-A196-01A 20 25 5'UTR-CDS Inter-chr q13.2 q26.1 Oncogene Tumor suppressor gene Seq+ 60793 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTAGE5-MIA2 CTAGE5 chr14 39736726 - MIA2 chr14 39721952 + Exonic hg19 HNSC TCGA-CQ-5332-01A 3 3 Out-of-frame Intra-chr q21.1 q21.1 Tumor suppressor gene 60794 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTBP1-POLN CTBP1 chr4 1231971 - POLN chr4 2097660 - Exonic hg19 BRCA TCGA-LD-A7W5-01A 4 5 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 60795 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTBP2-ADAM12 CTBP2 chr10 126799559 - ADAM12 chr10 128019078 - Exonic hg19 BRCA TCGA-A8-A08L-01A 11 27 5'UTR-CDS Intra-chr q26.13 q26.2 Seq+ 60796 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTBP2-MGMT CTBP2 chr10 126849396 - MGMT chr10 131334505 + Exonic hg19 LGG TCGA-FG-5965-02B 4 3 5'UTR-CDS Intra-chr q26.13 q26.3 60797 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTC-203F4.1-JUP CTC-203F4.1 chr5 134509862 - JUP chr17 39915122 - Exonic hg19 BLCA TCGA-BT-A0YX-01A 117 86 Out-of-frame Inter-chr q21.2 60798 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTCF-CES2 CTCF chr16 67605167 - CES2 chr16 66971940 + Exonic hg19 SKCM TCGA-FR-A2OS-01A 43 13 5'UTR-5'UTR Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 Seq+ 60799 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTCF-E2F4 CTCF chr16 67605167 - E2F4 chr16 67228589 + Exonic hg19 LUSC TCGA-LA-A7SW-01A 12 11 5'UTR-CDS Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 Transcription factor Seq+ 60800 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTCF-GFOD2 CTCF chr16 67663436 - GFOD2 chr16 67719705 - Exonic hg19 HNSC TCGA-P3-A6T7-01A 2 3 CDS-5'UTR Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 Seq+ 60801 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTCF-HSD11B2 CTCF chr16 67605167 - HSD11B2 chr16 67469531 + Exonic hg19 STAD TCGA-BR-8373-01A 2 3 5'UTR-CDS Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 60802 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTD-2006C1.2-ATCAY CTD-2006C1.2 chr19 12098638 - ATCAY chr19 3917740 + Exonic hg19 SKCM TCGA-DA-A1I0-06A 10 15 Out-of-frame Intra-chr p13.3 60803 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTD-2006C1.2-PKN1 CTD-2006C1.2 chr19 12098638 - PKN1 chr19 14551955 + Exonic hg19 SKCM TCGA-ER-A19M-06A 16 9 Out-of-frame Intra-chr p13.12 60804 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTD-2192J16.17-AKAP8L CTD-2192J16.17 chr19 12662144 - AKAP8L chr19 15521405 - Exonic hg19 BRCA TCGA-BH-A0HB-01A 3 1 Out-of-frame Intra-chr p13.12 60805 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTD-2192J16.17-COL5A3 CTD-2192J16.17 chr19 12662144 - COL5A3 chr19 10112557 - Exonic hg19 BLCA TCGA-GV-A40G-01A 14 4 Out-of-frame Intra-chr p13.2 60806 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTD-2192J16.17-WIZ CTD-2192J16.17 chr19 12662144 - WIZ chr19 15538344 - Exonic hg19 BRCA TCGA-AO-A03P-01A 29 13 Out-of-frame Intra-chr p13.12 60807 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTD-2368P22.1-LRP3 CTD-2368P22.1 chr19 58514414 - LRP3 chr19 33687636 + Exonic hg19 SARC TCGA-DX-A3UA-01A 29 7 Out-of-frame Intra-chr q13.11 60808 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTD-2589C9.4-EHBP1 CTD-2589C9.4 chr11 118963521 - EHBP1 chr2 63053222 + Exonic hg19 BRCA TCGA-D8-A147-01A 31 3 Out-of-frame Inter-chr p15 60809 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTD-2589C9.4-FOXR1 CTD-2589C9.4 chr11 118955776 - FOXR1 chr11 118849492 + Exonic hg19 LUAD TCGA-99-7458-01A 28 4 Out-of-frame Intra-chr 60810 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTD-2589C9.4-FOXR1 CTD-2589C9.4 chr11 118960470 - FOXR1 chr11 118849492 + Exonic hg19 BRCA TCGA-OL-A66I-01A 3 2 Out-of-frame Intra-chr 60811 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTDP1-NFATC1 CTDP1 chr18 77478016 - NFATC1 chr18 77227450 + Exonic hg19 LAML TCGA-AB-2811-03B 2 4 Out-of-frame Intra-chr q23 Transcription factor Seq+ 60812 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTDP1-NFATC1 CTDP1 chr18 77475528 - NFATC1 chr18 77287528 + Exonic hg19 SARC TCGA-X6-A7WA-01A 19 7 In-Frame Intra-chr q23 Transcription factor Seq+ 60813 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTDP1-PQLC1 CTDP1 chr18 77464917 - PQLC1 chr18 77664183 - Exonic hg19 LAML TCGA-AB-2811-03B 4 4 In-Frame Intra-chr q23 60814 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTDSP2-C12orf10 CTDSP2 chr12 58240155 - C12orf10 chr12 53699692 + Exonic hg19 GBM TCGA-41-2571-01A 83 283 Out-of-frame Intra-chr q14.1 q13.13 Seq+ 60815 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTDSP2-COL15A1 CTDSP2 chr12 58240155 - COL15A1 chr9 101759216 + Exonic hg19 LGG TCGA-IK-7675-01A 34 45 Out-of-frame Inter-chr q14.1 q22.33 Seq+ 60816 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTDSP2-DCUN1D4 CTDSP2 chr12 58240155 - DCUN1D4 chr4 52765436 + Exonic hg19 GBM TCGA-06-2559-01A 12 48 Out-of-frame Inter-chr q14.1 q12 Seq+ 60817 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTDSP2-MDM2 CTDSP2 chr12 58240155 - MDM2 chr12 69202988 + Exonic hg19 GBM TCGA-06-5856-01A 9 37 Out-of-frame Intra-chr q14.1 q15 Oncogene Seq+ 60818 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTDSP2-TSPAN31 CTDSP2 chr12 58240155 - TSPAN31 chr12 58140372 + Exonic hg19 GBM TCGA-16-0846-01A 5 25 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 60819 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTDSPL-ITGA9 CTDSPL chr3 37903769 - ITGA9 chr3 37774203 + Exonic hg19 KICH TCGA-KL-8339-01A 6 10 Out-of-frame Intra-chr p22.2 Tumor suppressor gene p22.2 Oncogene Seq+ 60820 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTDSPL-TMCC1 CTDSPL chr3 38012990 - TMCC1 chr3 129390107 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 3 3 In-Frame Intra-chr p22.2 Tumor suppressor gene q22.1 Seq+ 60821 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTDSPL-TNRC6B CTDSPL chr3 37988702 - TNRC6B chr22 40717094 + Exonic hg19 THYM TCGA-XM-A8RF-01A 4 3 In-Frame Inter-chr p22.2 Tumor suppressor gene q13.1 Seq+ 60822 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTDSPL-WRN CTDSPL chr3 37903769 - WRN chr8 30954284 + Exonic hg19 BLCA TCGA-DK-A3X2-01A 5 2 Out-of-frame Inter-chr p22.2 Tumor suppressor gene p12 Oncogene Seq+ 60823 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTDSPL2-FBXO42 CTDSPL2 chr15 44719970 - FBXO42 chr1 16621412 - Exonic hg19 UCEC TCGA-AX-A3G4-01A 9 9 5'UTR-CDS Inter-chr q15.3 p36.13 Seq+ 60824 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTF1-BCL7C CTF1 chr16 30910854 - BCL7C chr16 30900266 - Exonic hg19 BRCA TCGA-D8-A13Y-01A 13 9 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 60825 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTIF-C5orf56 CTIF chr18 46288060 - C5orf56 chr5 131785342 + Exonic hg19 UCEC TCGA-DF-A2KR-01A 12 11 CDS-5'UTR Inter-chr q31.1 Seq+ 60826 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTIF-C6orf57 CTIF chr18 46288060 - C6orf57 chr6 71298318 + Exonic hg19 LUAD TCGA-44-7667-01A 15 4 Out-of-frame Inter-chr Seq+ 60827 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTIF-GRM4 CTIF chr18 46197115 - GRM4 chr6 34059876 - Exonic hg19 KIRC TCGA-B0-4945-01A 8 5 In-Frame Inter-chr p21.31 Seq+ 60828 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTIF-JUB CTIF chr18 46065683 - JUB chr14 23447654 - Exonic hg19 SARC TCGA-DX-AB2Z-01A 107 79 Out-of-frame Inter-chr 60829 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTIF-KATNAL2 CTIF chr18 46197115 - KATNAL2 chr18 44572828 + Exonic hg19 LIHC TCGA-KR-A7K8-01A 5 1 Out-of-frame Intra-chr q21.1 Seq+ 60830 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTIF-MOCOS CTIF chr18 46065683 - MOCOS chr18 33828885 + Exonic hg19 LUSC TCGA-43-5670-01A 28 20 5'UTR-CDS Intra-chr q12.2 Seq+ 60831 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTIF-PSTPIP2 CTIF chr18 46065683 - PSTPIP2 chr18 43620013 - Exonic hg19 LUSC TCGA-56-6546-01A 6 4 5'UTR-CDS Intra-chr q21.1 Seq+ 60832 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTIF-SMAD2 CTIF chr18 46146116 - SMAD2 chr18 45423180 - Exonic hg19 BRCA TCGA-A2-A3XY-01A 3 6 CDS-5'UTR Intra-chr q21.1 Oncogene Tumor suppressor gene Seq+ 60833 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTIF-WASF2 CTIF chr18 46065683 - WASF2 chr1 27755443 - Exonic hg19 BRCA TCGA-A2-A1G1-01A 3 6 5'UTR-5'UTR Inter-chr p36.11 Seq+ 60834 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNNA1-C5orf32 CTNNA1 chr5 138119061 - C5orf32 chr5 139622890 + Exonic hg19 SARC TCGA-DX-A6YS-01A 26 18 Out-of-frame Intra-chr q31.2 Oncogene 60835 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNNA1-COTL1 CTNNA1 chr5 138119061 - COTL1 chr16 84600561 - Exonic hg19 PRAD TCGA-V1-A9ZR-01A 3 5 Out-of-frame Inter-chr q31.2 Oncogene q24.1 Seq+ 60836 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNNA1-EGR1 CTNNA1 chr5 138163407 - EGR1 chr5 137802446 + Exonic hg19 ESCA TCGA-L5-A4OQ-01A 9 109 Out-of-frame Intra-chr q31.2 Oncogene q31.2 Tumor suppressor gene Transcription factor Seq+ 60837 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNNA1-LARP1 CTNNA1 chr5 138088860 - LARP1 chr5 154190807 + Exonic hg19 BLCA TCGA-4Z-AA84-01A 2 2 5'UTR-CDS Intra-chr q31.2 Oncogene q33.2 Seq+ 60838 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNNA1-REEP2 CTNNA1 chr5 138163407 - REEP2 chr5 137776705 + Exonic hg19 STAD TCGA-VQ-A8PH-01A 3 19 Out-of-frame Intra-chr q31.2 Oncogene q31.2 Seq+ 60839 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNNA1-SLC38A9 CTNNA1 chr5 138089199 - SLC38A9 chr5 55000262 - Exonic hg19 LUAD TCGA-55-6975-01A 9 6 Out-of-frame Intra-chr q31.2 Oncogene q11.2 Seq+ 60840 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNNA1-WNT8A CTNNA1 chr5 138223331 - WNT8A chr5 137420187 + Exonic hg19 UCEC TCGA-PG-A914-01A 10 9 In-Frame Intra-chr q31.2 Oncogene q31.2 Seq+ 60841 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNNA2-REG3G CTNNA2 chr2 79878784 - REG3G chr2 79253109 + Exonic hg19 UCEC TCGA-B5-A3FD-01A 35 33 CDS-5'UTR Intra-chr p12 Tumor suppressor gene p12 Seq+ 60842 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNNA3-C14orf166B CTNNA3 chr10 69281600 - C14orf166B chr14 77302550 + Exonic hg19 BRCA TCGA-C8-A26Y-01A 2 2 In-Frame Inter-chr q21.3 Tumor suppressor gene Seq+ 60843 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNNA3-LOH12CR1 CTNNA3 chr10 68381450 - LOH12CR1 chr12 12618480 + Exonic hg19 BRCA TCGA-A7-A5ZX-01A 13 5 In-Frame Inter-chr q21.3 Tumor suppressor gene 60844 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNNA3-MGMT CTNNA3 chr10 68381450 - MGMT chr10 131334505 + Exonic hg19 BRCA TCGA-AO-A03V-01A 2 2 In-Frame Intra-chr q21.3 Tumor suppressor gene q26.3 Seq+ 60845 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNNA3-SGMS1 CTNNA3 chr10 68979365 - SGMS1 chr10 52279681 - Exonic hg19 PRAD TCGA-G9-6332-01A 8 1 CDS-5'UTR Intra-chr q21.3 Tumor suppressor gene q11.23 Tumor suppressor gene 60846 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNNAL1-EPB41L4B CTNNAL1 chr9 111754912 - EPB41L4B chr9 111945077 - Exonic hg19 PRAD TCGA-ZG-A9LN-01A 4 4 In-Frame Intra-chr q31.3 q31.3 60847 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNNB1-DOCK3 CTNNB1 chr3 41280845 - DOCK3 chr3 50927457 + Exonic hg19 MESO TCGA-YS-A95C-01A 4 6 3'UTR-CDS Intra-chr p22.1 Oncogene p21.2 Seq+ 60848 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNNB1-IGF2BP2 CTNNB1 chr3 41241161 - IGF2BP2 chr3 185416135 - Exonic hg19 UCS TCGA-ND-A4WF-01A 8 4 5'UTR-CDS Intra-chr p22.1 Oncogene q27.2 Seq+ 60849 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNNB1-IQCE CTNNB1 chr3 41281934 - IQCE chr7 2641075 + Exonic hg19 SKCM TCGA-D3-A2J6-06A 2 33 3'UTR-CDS Inter-chr p22.1 Oncogene p22.3 60850 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNNB1-SLC38A5 CTNNB1 chr3 41281934 - SLC38A5 chrX 48327824 - Exonic hg19 BRCA TCGA-AR-A1AS-01A 2 4 3'UTR-5'UTR Inter-chr p22.1 Oncogene p11.23 60851 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNNB1-TCOF1 CTNNB1 chr3 41281934 - TCOF1 chr5 149777917 + Exonic hg19 LUSC TCGA-L3-A524-01A 2 2 3'UTR-CDS Inter-chr p22.1 Oncogene q32 60852 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNNB1-THRB CTNNB1 chr3 41241161 - THRB chr3 24270492 - Exonic hg19 BRCA TCGA-E2-A14N-01A 3 5 5'UTR-5'UTR Intra-chr p22.1 Oncogene p24.2 Tumor suppressor gene Transcription factor 60853 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNNBIP1-UBE4B CTNNBIP1 chr1 9970153 - UBE4B chr1 10238702 + Exonic hg19 LUSC TCGA-56-7730-01A 4 48 5'UTR-CDS Intra-chr p36.22 Tumor suppressor gene p36.22 Tumor suppressor gene Seq+ 60854 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNNBL1-TTI1 CTNNBL1 chr20 36322554 - TTI1 chr20 36642259 - Exonic hg19 BRCA TCGA-C8-A1HN-01A 10 5 CDS-5'UTR Intra-chr q11.23 q11.23 Seq+ 60855 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNND1-BTBD18 CTNND1 chr11 57529591 - BTBD18 chr11 57518708 - Exonic hg19 COAD TCGA-A6-A566-01A 4 2 5'UTR-5'UTR Intra-chr q12.1 Tumor suppressor gene q12.1 60856 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNND1-CLPB CTNND1 chr11 57577695 - CLPB chr11 72091428 - Exonic hg19 ESCA TCGA-L5-A4OO-01A 8 47 Out-of-frame Intra-chr q12.1 Tumor suppressor gene q13.4 Seq+ 60857 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNND1-DDAH2 CTNND1 chr11 57529518 - DDAH2 chr6 31696522 - Exonic hg19 BRCA TCGA-E9-A244-01A 68 71 5'UTR-CDS Inter-chr q12.1 Tumor suppressor gene Seq+ 60858 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNND1-DOCK8 CTNND1 chr11 57574455 - DOCK8 chr9 304581 + Exonic hg19 LUAD TCGA-83-5908-01A 15 12 Out-of-frame Inter-chr q12.1 Tumor suppressor gene p24.3 Seq+ 60859 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNND1-DTX4 CTNND1 chr11 57529518 - DTX4 chr11 58949212 + Exonic hg19 PRAD TCGA-YL-A8SH-01B 4 4 5'UTR-CDS Intra-chr q12.1 Tumor suppressor gene q12.1 Seq+ 60860 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNND1-GYLTL1B CTNND1 chr11 57572252 - GYLTL1B chr11 45944372 + Exonic hg19 LUSC TCGA-68-8251-01A 8 4 CDS-5'UTR Intra-chr q12.1 Tumor suppressor gene Seq+ 60861 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNND1-PACS1 CTNND1 chr11 57529518 - PACS1 chr11 65960957 + Exonic hg19 SKCM TCGA-D3-A2JB-06A 74 50 5'UTR-CDS Intra-chr q12.1 Tumor suppressor gene q13.1 Seq+ 60862 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNND1-SLC22A10 CTNND1 chr11 57529518 - SLC22A10 chr11 62934337 + Exonic hg19 CESC TCGA-MU-A51Y-01A 12 6 Out-of-frame Intra-chr q12.1 Tumor suppressor gene q12.3 Seq+ 60863 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNND1-TMX2 CTNND1 chr11 57529518 - TMX2 chr11 57505080 + Exonic hg19 BRCA TCGA-AR-A1AH-01A 37 23 5'UTR-5'UTR Intra-chr q12.1 Tumor suppressor gene q12.1 Seq+ 60864 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNND1-TMX2 CTNND1 chr11 57529518 - TMX2 chr11 57505080 + Exonic hg19 KIRC TCGA-BP-4962-01A 6 3 5'UTR-5'UTR Intra-chr q12.1 Tumor suppressor gene q12.1 Seq+ 60865 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNND1-ZDHHC5 CTNND1 chr11 57576938 - ZDHHC5 chr11 57463392 + Exonic hg19 LUAD TCGA-55-8506-01A 7 3 Out-of-frame Intra-chr q12.1 Tumor suppressor gene q12.1 Seq+ 60866 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNND1-ZDHHC5 CTNND1 chr11 57529518 - ZDHHC5 chr11 57466031 + Exonic hg19 LUAD TCGA-78-8640-01A 39 14 5'UTR-CDS Intra-chr q12.1 Tumor suppressor gene q12.1 Seq+ 60867 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNND1-ZNFX1 CTNND1 chr11 57586650 - ZNFX1 chr20 47863418 - Exonic hg19 BLCA TCGA-FD-A3SO-01A 2 1 Out-of-frame Inter-chr q12.1 Tumor suppressor gene q13.13 60868 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNND2-DAP CTNND2 chr5 11565056 - DAP chr5 10683683 - Exonic hg19 UCS TCGA-N6-A4VD-01A 6 25 In-Frame Intra-chr p15.2 p15.2 Seq+ 60869 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNND2-NRBP1 CTNND2 chr5 11732248 - NRBP1 chr2 27656540 + Exonic hg19 LGG TCGA-QH-A6XC-01A 59 31 In-Frame Inter-chr p15.2 p23.3 Other:NRBP Tumor suppressor gene Seq+ 60870 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNND2-P4HA2 CTNND2 chr5 11903929 - P4HA2 chr5 131554337 - Exonic hg19 BRCA TCGA-E9-A247-01A 2 1 CDS-5'UTR Intra-chr p15.2 q31.1 60871 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNND2-POLR1A CTNND2 chr5 11732248 - POLR1A chr2 86257519 - Exonic hg19 SKCM TCGA-D3-A2JC-06A 4 4 In-Frame Inter-chr p15.2 p11.2 60872 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNND2-PPARGC1B CTNND2 chr5 11082808 - PPARGC1B chr5 149199996 + Exonic hg19 SKCM TCGA-D3-A51N-06A 2 2 Out-of-frame Intra-chr p15.2 q32 60873 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNND2-RP11-1026M7.2 CTNND2 chr5 11346484 - RP11-1026M7.2 chr5 177220343 + Exonic hg19 LGG TCGA-WY-A85B-01A 4 29 Out-of-frame Intra-chr p15.2 60874 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTNS-OLFM2 CTNS chr17 3543561 - OLFM2 chr19 9971470 - Exonic hg19 SARC TCGA-DX-A8BK-01A 3 1 Out-of-frame Inter-chr p13.2 p13.2 60875 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTPS-ASB3 CTPS chr1 41474562 - ASB3 chr2 53897827 - Exonic hg19 KIRP TCGA-G7-A8LD-01A 62 51 Out-of-frame Inter-chr p16.2 60876 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTPS-NFYC CTPS chr1 41457517 - NFYC chr1 41204508 + Exonic hg19 OV TCGA-13-A5FT-01A 4 11 Out-of-frame Intra-chr p34.2 Transcription factor 60877 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTPS-NFYC CTPS chr1 41474386 - NFYC chr1 41213206 + Exonic hg19 STAD TCGA-FP-8631-01A 4 8 Out-of-frame Intra-chr p34.2 Transcription factor 60878 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTPS2-RBBP7 CTPS2 chrX 16716359 - RBBP7 chrX 16871965 - Exonic hg19 BRCA TCGA-A2-A0T7-01A 191 192 In-Frame Intra-chr p22.2 p22.2 Tumor suppressor gene Seq+ 60879 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTPS2-RBBP7 CTPS2 chrX 16685637 - RBBP7 chrX 16867424 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 7 12 Out-of-frame Intra-chr p22.2 p22.2 Tumor suppressor gene Seq+ 60880 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTPS2-RGN CTPS2 chrX 16716359 - RGN chrX 46940529 + Exonic hg19 SARC TCGA-X6-A8C6-01A 25 11 CDS-5'UTR Intra-chr p22.2 p11.3 Seq+ 60881 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTSB-ARFGEF2 CTSB chr8 11701829 - ARFGEF2 chr20 47615777 + Exonic hg19 LUAD TCGA-71-6725-01A 2 10 Out-of-frame Inter-chr p23.1 q13.13 60882 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTSB-CBS CTSB chr8 11701829 - CBS chr21 44476011 - Exonic hg19 THCA TCGA-DJ-A2PZ-01A 2 1 Out-of-frame Inter-chr p23.1 q22.3 60883 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTSB-EIF4A2 CTSB chr8 11701564 - EIF4A2 chr3 186501336 + Exonic hg19 THCA TCGA-DJ-A3V6-01A 3 1 Out-of-frame Inter-chr p23.1 q27.3 60884 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTSB-EIF4A2 CTSB chr8 11701564 - EIF4A2 chr3 186501336 + Exonic hg19 THCA TCGA-DJ-A3VM-01A 2 1 Out-of-frame Inter-chr p23.1 q27.3 60885 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTSB-EIF4A2 CTSB chr8 11701564 - EIF4A2 chr3 186501336 + Exonic hg19 THCA TCGA-ET-A40Q-01A 2 1 Out-of-frame Inter-chr p23.1 q27.3 60886 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTSB-FAR1 CTSB chr8 11701829 - FAR1 chr11 13744912 + Exonic hg19 LUAD TCGA-86-6851-01A 2 3 Out-of-frame Inter-chr p23.1 p15.3 60887 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTSB-FOXP1 CTSB chr8 11701829 - FOXP1 chr3 71007472 - Exonic hg19 KIRP TCGA-BQ-5884-01A 2 6 Out-of-frame Inter-chr p23.1 p13 Oncogene Tumor suppressor gene Transcription factor 60888 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTSB-PLAT CTSB chr8 11701829 - PLAT chr8 42051245 - Exonic hg19 THCA TCGA-EM-A3FK-01A 2 4 Out-of-frame Intra-chr p23.1 p11.21 60889 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTSB-TMEM173 CTSB chr8 11701564 - TMEM173 chr5 138862375 - Exonic hg19 THCA TCGA-4C-A93U-01A 2 1 Out-of-frame Inter-chr p23.1 q31.2 60890 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTSD-ARFGEF2 CTSD chr11 1773982 - ARFGEF2 chr20 47615777 + Exonic hg19 THCA TCGA-EM-A2CS-06A 2 2 3'UTR-CDS Inter-chr p15.5 q13.13 60891 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTSD-EEA1 CTSD chr11 1773982 - EEA1 chr12 93229203 - Exonic hg19 KICH TCGA-KL-8332-01A 2 1 3'UTR-CDS Inter-chr p15.5 q22 Transcription factor 60892 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTSF-RANBP3 CTSF chr11 66335745 - RANBP3 chr19 5921332 - Exonic hg19 SKCM TCGA-D3-A8GB-06A 13 33 In-Frame Inter-chr q13.2 p13.3 Seq+ 60893 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTSH-RASGRF1 CTSH chr15 79237233 - RASGRF1 chr15 79320201 - Exonic hg19 LUAD TCGA-86-8056-01A 425 92 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 60894 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTSH-RASGRF1 CTSH chr15 79221754 - RASGRF1 chr15 79254578 - Exonic hg19 BRCA TCGA-D8-A27R-01A 12 13 In-Frame Intra-chr q25.1 q25.1 Seq+ 60895 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTSO-NAA15 CTSO chr4 156849488 - NAA15 chr4 140305986 + Exonic hg19 COAD TCGA-AA-3495-01A 6 6 In-Frame Intra-chr q32.1 q31.1 60896 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTSS-TDRD10 CTSS chr1 150720253 - TDRD10 chr1 154519885 + Exonic hg19 SKCM TCGA-EB-A6QY-01A 71 36 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 60897 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTSW-FIBP CTSW chr11 65647757 - FIBP chr11 65653134 - Exonic hg19 BLCA TCGA-E7-A8O8-01A 178 150 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 60898 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTTN-ANO1 CTTN chr11 70256066 - ANO1 chr11 69933858 + Exonic hg19 BRCA TCGA-A8-A07O-01A 131 78 In-Frame Intra-chr q13.3 q13.3 Seq+ 60899 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTTN-CBS CTTN chr11 70282681 - CBS chr21 44476011 - Exonic hg19 HNSC TCGA-CV-5441-01A 2 12 Out-of-frame Inter-chr q13.3 q22.3 60900 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTTN-CLASP2 CTTN chr11 70282681 - CLASP2 chr3 33602368 - Exonic hg19 SKCM TCGA-ER-A19T-01A 2 9 Out-of-frame Inter-chr q13.3 p22.3 60901 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTTN-DDX27 CTTN chr11 70282681 - DDX27 chr20 47849303 + Exonic hg19 BLCA TCGA-GV-A3JV-01A 2 5 Out-of-frame Inter-chr q13.3 q13.13 60902 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTTN-DSG1 CTTN chr11 70269101 - DSG1 chr18 28906544 + Exonic hg19 LUSC TCGA-94-7033-01A 35 11 In-Frame Inter-chr q13.3 q12.1 Seq+ 60903 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTTN-FOLR1 CTTN chr11 70244720 - FOLR1 chr11 71903210 + Exonic hg19 LGG TCGA-DU-5871-01A 3 3 5'UTR-5'UTR Intra-chr q13.3 q13.4 Seq+ 60904 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTTN-FOLR1 CTTN chr11 70244720 - FOLR1 chr11 71903210 + Exonic hg19 BRCA TCGA-E9-A228-01A 298 410 5'UTR-5'UTR Intra-chr q13.3 q13.4 Seq+ 60905 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTTN-KIRREL3 CTTN chr11 70244720 - KIRREL3 chr11 126343361 - Exonic hg19 ESCA TCGA-IG-A3I8-01A 7 185 5'UTR-CDS Intra-chr q13.3 q24.2 Seq+ 60906 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTTN-PLEKHA5 CTTN chr11 70282681 - PLEKHA5 chr12 19441012 + Exonic hg19 BRCA TCGA-AR-A2LK-01A 2 9 Out-of-frame Inter-chr q13.3 p12.3 60907 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTTN-PPFIA1 CTTN chr11 70244720 - PPFIA1 chr11 70189775 + Exonic hg19 SARC TCGA-DX-AB2Q-01A 20 18 5'UTR-5'UTR Intra-chr q13.3 q13.3 Seq+ 60908 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTTN-PPP6R3 CTTN chr11 70271507 - PPP6R3 chr11 68350511 + Exonic hg19 SKCM TCGA-YG-AA3P-06A 65 37 Out-of-frame Intra-chr q13.3 q13.2 Seq+ 60909 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTTN-PSME2 CTTN chr11 70244720 - PSME2 chr14 24612880 - Exonic hg19 BRCA TCGA-A2-A0EQ-01A 6 123 5'UTR-CDS Inter-chr q13.3 q12 Seq+ 60910 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTTN-SHANK2 CTTN chr11 70256066 - SHANK2 chr11 70336492 - Exonic hg19 BLCA TCGA-UY-A9PH-01A 4 7 In-Frame Intra-chr q13.3 q13.4 Seq+ 60911 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTTNBP2NL-RP11-315O6.2 CTTNBP2NL chr1 112958886 - RP11-315O6.2 chr11 102369238 + Exonic hg19 OV TCGA-61-2111-01A 4 2 Out-of-frame Inter-chr p13.2 60912 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTTNBP2NL-SUCLA2 CTTNBP2NL chr1 112958886 - SUCLA2 chr13 48589384 - Exonic hg19 OV TCGA-10-0928-01A 3 3 Out-of-frame Inter-chr p13.2 q14.2 Seq+ 60913 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTU1-TMEM143 CTU1 chr19 51607319 - TMEM143 chr19 48837454 - Exonic hg19 CESC TCGA-EK-A3GM-01A 2 3 Out-of-frame Intra-chr q13.41 q13.33 Seq+ 60914 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CTU2-ZC3H18 CTU2 chr16 88773618 - ZC3H18 chr16 88675342 + Exonic hg19 LUSC TCGA-39-5035-01A 8 1 In-Frame Intra-chr q24.3 q24.2 60915 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUEDC1-COPZ2 CUEDC1 chr17 55962590 - COPZ2 chr17 46111310 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 36 19 In-Frame Intra-chr q22 q21.32 Seq+ 60916 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUEDC1-LRP8 CUEDC1 chr17 55956972 - LRP8 chr1 53746387 - Exonic hg19 SARC TCGA-DX-AB3A-01A 7 7 Out-of-frame Inter-chr q22 p32.3 Seq+ 60917 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUEDC2-ARL3 CUEDC2 chr10 104192283 - ARL3 chr10 104465246 - Exonic hg19 LIHC TCGA-5R-AA1C-01A 14 12 5'UTR-CDS Intra-chr q24.32 q24.32 Seq+ 60918 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUEDC2-POLR3A CUEDC2 chr10 104192283 - POLR3A chr10 79740031 - Exonic hg19 UCS TCGA-N5-A59F-01A 4 11 5'UTR-CDS Intra-chr q24.32 q22.3 Seq+ 60919 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUL1-GIMAP5 CUL1 chr7 148484212 - GIMAP5 chr7 150437967 + Exonic hg19 BRCA TCGA-B6-A0IN-01A 7 10 CDS-5'UTR Intra-chr q36.1 Tumor suppressor gene q36.1 Seq+ 60920 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUL1-MUT CUL1 chr7 148396121 - MUT chr6 49427218 - Exonic hg19 OV TCGA-23-1122-01A 2 2 5'UTR-5'UTR Inter-chr q36.1 Tumor suppressor gene p12.3 60921 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUL2-CYP2C18 CUL2 chr10 35379358 - CYP2C18 chr10 96447527 + Exonic hg19 PRAD TCGA-V1-A9ZK-01A 8 8 5'UTR-CDS Intra-chr p11.21 Tumor suppressor gene q23.33 Seq+ 60922 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUL2-RB1CC1 CUL2 chr10 35379358 - RB1CC1 chr8 53589131 - Exonic hg19 CESC TCGA-WL-A834-01A 2 2 5'UTR-CDS Inter-chr p11.21 Tumor suppressor gene q11.23 Tumor suppressor gene 60923 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUL3-IRS1 CUL3 chr2 225422376 - IRS1 chr2 227600966 - Exonic hg19 BRCA TCGA-E9-A1NE-01A 203 92 CDS-3'UTR Intra-chr q36.2 q36.3 Seq+ 60924 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUL3-SPAG16 CUL3 chr2 225360549 - SPAG16 chr2 214174783 + Exonic hg19 LUSC TCGA-O2-A52V-01A 56 32 In-Frame Intra-chr q36.2 q34 Seq+ 60925 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUL4A-SUPT16H CUL4A chr13 113919391 - SUPT16H chr14 21829491 - Exonic hg19 LUAD TCGA-55-8620-01A 2 9 Out-of-frame Inter-chr q34 q11.2 60926 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUL4B-DAPK2 CUL4B chrX 119691779 - DAPK2 chr15 64275953 - Exonic hg19 LIHC TCGA-DD-A11C-01A 4 3 Out-of-frame Inter-chr q24 q22.31 CAMK:DAPK Tumor suppressor gene Seq+ 60927 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUL5-OPCML CUL5 chr11 107880098 - OPCML chr11 132307253 - Exonic hg19 PRAD TCGA-FC-A4JI-01A 6 3 Out-of-frame Intra-chr q22.3 Tumor suppressor gene q25 Tumor suppressor gene Seq+ 60928 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUL5-RAB39 CUL5 chr11 107925682 - RAB39 chr11 107832672 + Exonic hg19 BRCA TCGA-A2-A0CZ-01A 4 2 Out-of-frame Intra-chr q22.3 Tumor suppressor gene 60929 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUL5-SHANK2 CUL5 chr11 107925682 - SHANK2 chr11 70830078 - Exonic hg19 BRCA TCGA-A8-A06U-01A 6 6 Out-of-frame Intra-chr q22.3 Tumor suppressor gene q13.4 Seq+ 60930 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUL7-RRP36 CUL7 chr6 43013724 - RRP36 chr6 42992723 + Exonic hg19 STAD TCGA-CG-4438-01A 4 1 Out-of-frame Intra-chr p21.1 p21.1 60931 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUL9-KIF6 CUL9 chr6 43156453 - KIF6 chr6 39311591 - Exonic hg19 KIRP TCGA-B9-A69E-01A 569 394 In-Frame Intra-chr p21.1 p21.2 Seq+ 60932 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUTC-C19orf57 CUTC chr10 101514391 - C19orf57 chr19 14003703 - Exonic hg19 BRCA TCGA-C8-A12K-01A 6 4 Out-of-frame Inter-chr q24.2 p13.12 Seq+ 60933 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUX1-AHCYL2 CUX1 chr7 101459373 - AHCYL2 chr7 129019482 + Exonic hg19 LUSC TCGA-22-5480-01A 22 11 In-Frame Intra-chr q22.1 Tumor suppressor gene Transcription factor q32.1 Seq+ 60934 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUX1-BRAF CUX1 chr7 101758553 - BRAF chr7 140494267 - Exonic hg19 PAAD TCGA-F2-A44H-01A 3 1 In-Frame Intra-chr q22.1 Tumor suppressor gene Transcription factor q34 TKL:RAF Oncogene Seq+ 60935 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUX1-CDK14 CUX1 chr7 101758553 - CDK14 chr7 90376996 + Exonic hg19 PAAD TCGA-HZ-A4BH-01A 2 3 Out-of-frame Intra-chr q22.1 Tumor suppressor gene Transcription factor q21.13 60936 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUX1-CLCN3 CUX1 chr7 101927249 - CLCN3 chr4 170623929 + Exonic hg19 KICH TCGA-KL-8341-01A 2 9 Out-of-frame Inter-chr q22.1 Tumor suppressor gene Transcription factor q33 60937 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUX1-EHBP1L1 CUX1 chr7 101459373 - EHBP1L1 chr11 65351712 + Exonic hg19 LUSC TCGA-37-4132-01A 3 1 In-Frame Inter-chr q22.1 Tumor suppressor gene Transcription factor q13.1 Seq+ 60938 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUX1-EMID2 CUX1 chr7 101559505 - EMID2 chr7 101176363 + Exonic hg19 ESCA TCGA-L5-A8NI-01A 4 44 Out-of-frame Intra-chr q22.1 Tumor suppressor gene Transcription factor Seq+ 60939 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUX1-MARCH10 CUX1 chr7 101459373 - 2019_ 3_ 10_ chr17 60837367 - Exonic hg19 BRCA TCGA-A2-A0T7-01A 15 5 Out-of-frame Inter-chr q22.1 Tumor suppressor gene Transcription factor q23.2 Seq+ 60940 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUX1-POP7 CUX1 chr7 101801888 - POP7 chr7 100304444 + Exonic hg19 SARC TCGA-RN-AAAQ-01A 85 47 CDS-5'UTR Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 Seq+ 60941 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUX1-THSD7A CUX1 chr7 101713697 - THSD7A chr7 11676588 - Exonic hg19 HNSC TCGA-CV-6961-01A 16 5 In-Frame Intra-chr q22.1 Tumor suppressor gene Transcription factor p21.3 Seq+ 60942 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUX1-YEATS2 CUX1 chr7 101459373 - YEATS2 chr3 183490093 + Exonic hg19 PRAD TCGA-ZG-A9L1-01A 22 12 In-Frame Inter-chr q22.1 Tumor suppressor gene Transcription factor q27.1 Seq+ 60943 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUX2-CABP1 CUX2 chr12 111701643 - CABP1 chr12 121097681 + Exonic hg19 PRAD TCGA-VP-A872-01A 31 24 Out-of-frame Intra-chr q24.11 Transcription factor q24.31 Seq+ 60944 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CUX2-IFT81 CUX2 chr12 111472044 - IFT81 chr12 110565165 + Exonic hg19 UCS TCGA-NA-A4R1-01A 4 2 CDS-5'UTR Intra-chr q24.11 Transcription factor q24.11 Seq+ 60945 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CWC25-B4GALNT2 CWC25 chr17 36977154 - B4GALNT2 chr17 47218609 + Exonic hg19 LUAD TCGA-50-5066-01A 8 5 In-Frame Intra-chr q12 q21.32 Seq+ 60946 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CWC25-B4GALNT2 CWC25 chr17 36977154 - B4GALNT2 chr17 47218609 + Exonic hg19 LUAD TCGA-50-5066-02A 19 7 In-Frame Intra-chr q12 q21.32 Seq+ 60947 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CWC25-C17orf98 CWC25 chr17 36981419 - C17orf98 chr17 36993493 - Exonic hg19 ESCA TCGA-L5-A8NE-01A 6 18 In-Frame Intra-chr q12 q12 Seq+ 60948 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CWC25-FAM134C CWC25 chr17 36977154 - FAM134C chr17 40744180 - Exonic hg19 THYM TCGA-ZB-A961-01A 2 2 In-Frame Intra-chr q12 Seq+ 60949 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CWC25-FBXO47 CWC25 chr17 36965955 - FBXO47 chr17 37099989 - Exonic hg19 BRCA TCGA-AR-A0U3-01A 4 1 Out-of-frame Intra-chr q12 q12 Seq+ 60950 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CWC25-JUP CWC25 chr17 36981419 - JUP chr17 39915122 - Exonic hg19 COAD TCGA-AD-6899-01A 30 20 In-Frame Intra-chr q12 q21.2 Tumor suppressor gene Seq+ 60951 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CWC25-LASP1 CWC25 chr17 36971114 - LASP1 chr17 37074858 + Exonic hg19 COAD TCGA-AA-A02K-01A 69 41 Out-of-frame Intra-chr q12 q12 Seq+ 60952 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CWC25-MED24 CWC25 chr17 36977154 - MED24 chr17 38209888 - Exonic hg19 BRCA TCGA-E9-A228-01A 9 7 CDS-5'UTR Intra-chr q12 q21.1 Seq+ 60953 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CWC25-PRKAR1A CWC25 chr17 36981419 - PRKAR1A chr17 66511535 + Exonic hg19 BRCA TCGA-3C-AALI-01A 16 13 CDS-5'UTR Intra-chr q12 q24.2 Oncogene Tumor suppressor gene Seq+ 60954 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CWC25-SLC35B1 CWC25 chr17 36981419 - SLC35B1 chr17 47783696 - Exonic hg19 BRCA TCGA-3C-AALI-01A 56 57 Out-of-frame Intra-chr q12 q21.33 Seq+ 60955 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CWC27-PPAP2A CWC27 chr5 64181373 - PPAP2A chr5 54721867 - Exonic hg19 ACC TCGA-OR-A5J1-01A 3 7 Out-of-frame Intra-chr q12.3 Seq+ 60956 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CWF19L1-HSPA12A CWF19L1 chr10 102027328 - HSPA12A chr10 118466796 - Exonic hg19 LGG TCGA-TM-A84J-01A 54 96 Out-of-frame Intra-chr q24.31 q25.3 Seq+ 60957 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CWF19L2-AMICA1 CWF19L2 chr11 107286935 - AMICA1 chr11 118076706 - Exonic hg19 LUSC TCGA-43-7657-01A 5 1 Out-of-frame Intra-chr q22.3 60958 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CWF19L2-SLN CWF19L2 chr11 107286935 - SLN chr11 107578731 - Exonic hg19 LIHC TCGA-G3-A3CG-01A 2 2 CDS-5'UTR Intra-chr q22.3 q22.3 Seq+ 60959 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CXADR-APP CXADR chr21 18885490 - APP chr21 27425664 - Exonic hg19 PRAD TCGA-CH-5792-01A 220 209 In-Frame Intra-chr q21.1 q21.3 Seq+ 60960 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CXADR-HERC1 CXADR chr21 18937929 - HERC1 chr15 63908881 - Exonic hg19 PRAD TCGA-ZG-A9M4-01A 4 6 In-Frame Inter-chr q21.1 q22.31 Seq+ 60961 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CXADR-MTCP1NB CXADR chr21 18885490 - MTCP1NB chrX 154292308 - Exonic hg19 KIRC TCGA-CJ-5681-01A 5 7 CDS-5'UTR Inter-chr q21.1 60962 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CXCL13-UTRN CXCL13 chr4 78532988 - UTRN chr6 144665237 + Exonic hg19 LUSC TCGA-85-7950-01A 2 15 Out-of-frame Inter-chr q21.1 q24.2 60963 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CXCL14-C7 CXCL14 chr5 134906376 - C7 chr5 40954982 + Exonic hg19 KIRP TCGA-BQ-5884-01A 2 10 Out-of-frame Intra-chr q31.1 Tumor suppressor gene p13.1 Tumor suppressor gene 60964 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CXCL14-SUPT16H CXCL14 chr5 134906376 - SUPT16H chr14 21829491 - Exonic hg19 HNSC TCGA-CV-5441-01A 2 122 Out-of-frame Inter-chr q31.1 Tumor suppressor gene q11.2 60965 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CXCL16-TEKT1 CXCL16 chr17 4641703 - TEKT1 chr17 6722677 - Exonic hg19 BRCA TCGA-OL-A66P-01A 3 3 In-Frame Intra-chr p13.2 p13.1 Seq+ 60966 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CXCR4-CFLAR CXCR4 chr2 136875616 - CFLAR chr2 201994452 + Exonic hg19 DLBC TCGA-FA-A6HN-01A 77 31 CDS-5'UTR Intra-chr q22.1 q33.1 Seq+ 60967 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CXorf59-CXorf22 CXorf59 chrX 36156581 - CXorf22 chrX 35993264 + Exonic hg19 UCEC TCGA-BK-A0CA-01A 2 2 Out-of-frame Intra-chr 60968 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYB561-GNA13 CYB561 chr17 61523606 - GNA13 chr17 63049846 - Exonic hg19 BRCA TCGA-C8-A12P-01A 15 29 5'UTR-CDS Intra-chr q23.3 q24.1 Seq+ 60969 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYB561-SQSTM1 CYB561 chr17 61509668 - SQSTM1 chr5 179250858 + Exonic hg19 PRAD TCGA-G9-6353-01A 2 10 3'UTR-CDS Inter-chr q23.3 q35.3 60970 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYB561-USP32 CYB561 chr17 61523606 - USP32 chr17 58422969 - Exonic hg19 BRCA TCGA-AO-A0J5-01A 13 19 5'UTR-CDS Intra-chr q23.3 q23.2 Seq+ 60971 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYB561-XBP1 CYB561 chr17 61509668 - XBP1 chr22 29196585 - Exonic hg19 PRAD TCGA-HC-7210-01A 2 1 Out-of-frame Inter-chr q23.3 q12.1 Transcription factor 60972 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYB561D2-ERC2 CYB561D2 chr3 50388415 - ERC2 chr3 56053059 - Exonic hg19 PRAD TCGA-ZG-A8QY-01A 17 7 5'UTR-CDS Intra-chr p21.31 Tumor suppressor gene p14.3 Seq+ 60973 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYB561D2-RBM6 CYB561D2 chr3 50388991 - RBM6 chr3 50085678 + Exonic hg19 UCEC TCGA-EO-A3KW-01A 4 3 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene Seq+ 60974 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYB5A-DCC CYB5A chr18 71958982 - DCC chr18 50848417 + Exonic hg19 SKCM TCGA-D9-A4Z5-01A 4 1 Out-of-frame Intra-chr q22.3 Tumor suppressor gene q21.2 Oncogene Tumor suppressor gene 60975 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYB5R4-CNTN6 CYB5R4 chr6 84574047 - CNTN6 chr3 1189611 + Exonic hg19 BRCA TCGA-S3-A6ZF-01A 8 1 CDS-5'UTR Inter-chr q14.2 p26.3 Seq+ 60976 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYB5R4-FNDC1 CYB5R4 chr6 84574047 - FNDC1 chr6 159618463 + Exonic hg19 PRAD TCGA-YL-A8SP-01B 2 4 In-Frame Intra-chr q14.2 q25.3 Seq+ 60977 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYB5R4-RIPPLY2 CYB5R4 chr6 84574047 - RIPPLY2 chr6 84566961 + Exonic hg19 THYM TCGA-ZB-A966-01A 4 5 Out-of-frame Intra-chr q14.2 q14.2 Seq+ 60978 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYB5R4-UBE2CBP CYB5R4 chr6 84650320 - UBE2CBP chr6 83754378 - Exonic hg19 PRAD TCGA-EJ-7330-01A 3 3 Out-of-frame Intra-chr q14.2 60979 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYFIP1-ACACA CYFIP1 chr15 22935964 - ACACA chr17 35634007 - Exonic hg19 BRCA TCGA-UL-AAZ6-01A 5 10 In-Frame Inter-chr q11.2 Seq+ 60980 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYFIP1-TUBGCP5 CYFIP1 chr15 22926065 - TUBGCP5 chr15 22861737 + Exonic hg19 BRCA TCGA-E2-A158-01A 9 8 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 60981 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYFIP1-TUBGCP5 CYFIP1 chr15 22892781 - TUBGCP5 chr15 22861737 + Exonic hg19 BLCA TCGA-GD-A3OS-01A 8 5 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 60982 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYFIP1-ZNFX1 CYFIP1 chr15 23003602 - ZNFX1 chr20 47863418 - Exonic hg19 SKCM TCGA-DA-A1I1-06A 2 2 Out-of-frame Inter-chr q11.2 q13.13 60983 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYLD-FAM49B CYLD chr16 50776752 - FAM49B chr8 130983241 - Exonic hg19 PRAD TCGA-VP-A87D-01A 5 2 5'UTR-3'UTR Inter-chr q12.1 Oncogene Tumor suppressor gene q24.21 Seq+ 60984 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYP20A1-C18orf34 CYP20A1 chr2 204116832 - C18orf34 chr18 30795659 - Exonic hg19 CESC TCGA-VS-A8EC-01A 12 9 In-Frame Inter-chr q33.2 60985 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYP27A1-STK36 CYP27A1 chr2 219647160 - STK36 chr2 219538348 + Exonic hg19 LIHC TCGA-BC-A10R-01A 3 2 In-Frame Intra-chr q35 q35 Oncogene Seq+ 60986 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYP2C18-HELLS CYP2C18 chr10 96466717 - HELLS chr10 96331145 + Exonic hg19 LIHC TCGA-ZS-A9CF-01A 19 15 In-Frame Intra-chr q23.33 q23.33 Seq+ 60987 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYP2C18-HELLS CYP2C18 chr10 96466717 - HELLS chr10 96331145 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 18 13 In-Frame Intra-chr q23.33 q23.33 Seq+ 60988 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYP2C19-TBC1D12 CYP2C19 chr10 96541754 - TBC1D12 chr10 96290959 + Exonic hg19 LIHC TCGA-DD-AAVR-01A 2 2 Out-of-frame Intra-chr q23.33 Oncogene q23.33 Seq+ 60989 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYP2C9-APOH CYP2C9 chr10 96749447 - APOH chr17 64225556 - Exonic hg19 LIHC TCGA-DD-AAE2-01A 2 1 3'UTR-5'UTR Inter-chr q23.33 q24.2 60990 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYP39A1-FGGY CYP39A1 chr6 46609900 - FGGY chr1 60223603 + Exonic hg19 PRAD TCGA-EJ-8468-01A 7 3 Out-of-frame Inter-chr p12.3 p32.1 Seq+ 60991 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYP39A1-LEMD2 CYP39A1 chr6 46620143 - LEMD2 chr6 33748930 - Exonic hg19 KIRC TCGA-A3-3313-01A 36 21 Out-of-frame Intra-chr p12.3 p21.31 Seq+ 60992 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYP39A1-VPS33A CYP39A1 chr6 46598700 - VPS33A chr12 122745994 - Exonic hg19 SARC TCGA-DX-A7EI-01A 6 5 Out-of-frame Inter-chr p12.3 q24.31 Seq+ 60993 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYP4F12-PTGER1 CYP4F12 chr19 15789215 - PTGER1 chr19 14585149 - Exonic hg19 LIHC TCGA-RC-A6M4-01A 97 76 CDS-5'UTR Intra-chr p13.12 p13.12 Seq+ 60994 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYP4Z1-THOC4 CYP4Z1 chr1 47533339 - THOC4 chr17 79848696 - Exonic hg19 LIHC TCGA-BC-A3KG-01A 5 2 Out-of-frame Inter-chr p33 60995 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYP51A1-ANKIB1 CYP51A1 chr7 91763487 - ANKIB1 chr7 91924203 + Exonic hg19 ESCA TCGA-L5-A4OW-01A 2 10 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 60996 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYP7B1-EPS15 CYP7B1 chr8 65517239 - EPS15 chr1 51946986 - Exonic hg19 SARC TCGA-PC-A5DO-01A 13 5 In-Frame Inter-chr q12.3 p32.3 Seq+ 60997 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYP7B1-SULF1 CYP7B1 chr8 65711023 - SULF1 chr8 70475774 + Exonic hg19 SKCM TCGA-WE-AAA3-06A 30 11 CDS-5'UTR Intra-chr q12.3 q13.2 Seq+ 60998 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYTH1-KCNJ4 CYTH1 chr17 76778284 - KCNJ4 chr22 38824176 - Exonic hg19 ESCA TCGA-R6-A6Y0-01B 4 3 CDS-5'UTR Inter-chr q25.3 q13.1 60999 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYTH1-KSR1 CYTH1 chr17 76732774 - KSR1 chr17 25877594 + Exonic hg19 LUAD TCGA-44-A47B-01A 5 1 CDS-5'UTR Intra-chr q25.3 q11.2 TKL:RAF Seq+ 61000 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYTH1-MACROD1 CYTH1 chr17 76694351 - MACROD1 chr11 63782753 - Exonic hg19 LGG TCGA-HT-A619-01A 16 9 In-Frame Inter-chr q25.3 q13.1 Seq+ 61001 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYTH1-MRC2 CYTH1 chr17 76732774 - MRC2 chr17 60741909 + Exonic hg19 BRCA TCGA-D8-A27N-01A 47 24 Out-of-frame Intra-chr q25.3 q23.2 Seq+ 61002 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYTH3-C7orf70 CYTH3 chr7 6312105 - C7orf70 chr7 6370866 - Exonic hg19 UCEC TCGA-BK-A139-01A 2 1 Out-of-frame Intra-chr p22.1 61003 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYTH3-GRID1 CYTH3 chr7 6312105 - GRID1 chr10 87966405 - Exonic hg19 SKCM TCGA-EB-A42Z-01A 64 32 In-Frame Inter-chr p22.1 q23.2 Seq+ 61004 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYTH3-MAD1L1 CYTH3 chr7 6210833 - MAD1L1 chr7 1938026 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 3 5 In-Frame Intra-chr p22.1 p22.3 Tumor suppressor gene Seq+ 61005 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYTH3-SPATA18 CYTH3 chr7 6217454 - SPATA18 chr4 52938083 + Exonic hg19 LUAD TCGA-86-8074-01A 2 2 In-Frame Inter-chr p22.1 q12 Seq+ 61006 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq CYTIP-MGAT5 CYTIP chr2 158343844 - MGAT5 chr2 135027957 + Exonic hg19 LUSC TCGA-66-2756-01A 349 145 5'UTR-CDS Intra-chr q24.1 q21.2 Seq+ 61007 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq D2HGDH-CUL3 D2HGDH chr2 242674931 - CUL3 chr2 225376299 - Exonic hg19 LGG TCGA-S9-A6U6-01A 5 2 Out-of-frame Intra-chr q37.3 q36.2 Seq+ 61008 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAAM1-C12orf10 DAAM1 chr14 59798638 - C12orf10 chr12 53699692 + Exonic hg19 SKCM TCGA-EE-A2A6-06A 27 15 In-Frame Inter-chr q23.1 q13.13 Seq+ 61009 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAAM1-HS6ST3 DAAM1 chr14 59655486 - HS6ST3 chr13 97484744 + Exonic hg19 PCPG TCGA-QT-A5XN-01A 10 5 5'UTR-CDS Inter-chr q23.1 q32.1 Seq+ 61010 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAAM1-MNAT1 DAAM1 chr14 59798638 - MNAT1 chr14 61346432 + Exonic hg19 SARC TCGA-WP-A9GB-01A 10 6 In-Frame Intra-chr q23.1 q23.1 Seq+ 61011 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAB1-C12orf63 DAB1 chr1 57756636 - C12orf63 chr12 97133734 + Exonic hg19 SARC TCGA-DX-A23V-01A 5 1 Out-of-frame Inter-chr p32.1 61012 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAB1-DRAM1 DAB1 chr1 58715912 - DRAM1 chr12 102291641 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 16 14 5'UTR-CDS Inter-chr p32.1 q23.2 Seq+ 61013 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAB1-OMA1 DAB1 chr1 57602216 - OMA1 chr1 58946846 - Exonic hg19 SARC TCGA-DX-A23U-01A 25 12 In-Frame Intra-chr p32.1 p32.1 61014 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAB1-TTC22 DAB1 chr1 57889602 - TTC22 chr1 55251817 - Exonic hg19 SARC TCGA-DX-A23U-01A 7 7 5'UTR-CDS Intra-chr p32.1 p32.3 61015 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAB2-ARSB DAB2 chr5 39392467 - ARSB chr5 78265015 - Exonic hg19 ACC TCGA-OR-A5J1-01A 46 22 In-Frame Intra-chr p13.1 Tumor suppressor gene q14.1 Seq+ 61016 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAB2-COL4A3BP DAB2 chr5 39424906 - COL4A3BP chr5 74755006 - Exonic hg19 ACC TCGA-OR-A5J1-01A 12 6 5'UTR-CDS Intra-chr p13.1 Tumor suppressor gene q13.3 Seq+ 61017 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAB2-FASTKD3 DAB2 chr5 39424906 - FASTKD3 chr5 7866096 - Exonic hg19 SARC TCGA-DX-AB2P-01A 2 4 5'UTR-CDS Intra-chr p13.1 Tumor suppressor gene p15.31 61018 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAB2-OXCT1 DAB2 chr5 39462180 - OXCT1 chr5 41853656 - Exonic hg19 SKCM TCGA-EE-A184-06A 20 15 5'UTR-CDS Intra-chr p13.1 Tumor suppressor gene p13.1 61019 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAB2IP-HTN3 DAB2IP chr9 124441060 - HTN3 chr4 70896445 + Exonic hg19 BRCA TCGA-A2-A0T1-01A 12 3 5'UTR-5'UTR Inter-chr q33.2 Tumor suppressor gene Seq+ 61020 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAB2IP-SLC44A4 DAB2IP chr9 124533003 - SLC44A4 chr6 31837414 - Exonic hg19 OV TCGA-61-1728-01A 2 16 In-Frame Inter-chr q33.2 Tumor suppressor gene Seq+ 61021 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DACH1-KLF12 DACH1 chr13 72440054 - KLF12 chr13 74269808 - Exonic hg19 ESCA TCGA-XP-A8T8-01A 13 26 Out-of-frame Intra-chr q21.33 Tumor suppressor gene Transcription factor q22.1 Transcription factor Seq+ 61022 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DACH1-TNFSF11 DACH1 chr13 72204688 - TNFSF11 chr13 43180633 + Exonic hg19 SARC TCGA-KD-A5QU-01A 9 1 In-Frame Intra-chr q21.33 Tumor suppressor gene Transcription factor q14.11 Seq+ 61023 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAG1-LARS2 DAG1 chr3 49548252 - LARS2 chr3 45588843 + Exonic hg19 LIHC TCGA-2Y-A9H0-01A 68 36 In-Frame Intra-chr p21.31 p21.31 Seq+ 61024 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAG1-ZNF589 DAG1 chr3 49507866 - ZNF589 chr3 48302303 + Exonic hg19 BRCA TCGA-BH-A0H7-01A 5 3 5'UTR-CDS Intra-chr p21.31 p21.31 Transcription factor Seq+ 61025 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAGLA-C11orf66 DAGLA chr11 61487722 - C11orf66 chr11 61249254 + Exonic hg19 BRCA TCGA-OL-A66I-01A 9 2 Out-of-frame Intra-chr q12.2 61026 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAGLA-MS4A10 DAGLA chr11 61502474 - MS4A10 chr11 60561445 + Exonic hg19 HNSC TCGA-QK-A6VB-01A 4 1 In-Frame Intra-chr q12.2 q12.2 61027 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAK-TMEM109 DAK chr11 61113418 - TMEM109 chr11 60687158 + Exonic hg19 OV TCGA-04-1356-01A 2 5 CDS-5'UTR Intra-chr q12.2 Seq+ 61028 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DALRD3-IMPDH2 DALRD3 chr3 49058279 - IMPDH2 chr3 49062235 - Exonic hg19 UCS TCGA-ND-A4WF-01A 30 24 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 61029 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAP-CTNND2 DAP chr5 10748287 - CTNND2 chr5 11732384 - Exonic hg19 LIHC TCGA-DD-AAVV-01A 99 82 Out-of-frame Intra-chr p15.2 p15.2 Seq+ 61030 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAP-RGL2 DAP chr5 10679342 - RGL2 chr6 33267176 - Exonic hg19 PRAD TCGA-HC-A76W-01A 2 1 3'UTR-5'UTR Inter-chr p15.2 61031 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAP-SEMA5A DAP chr5 10748287 - SEMA5A chr5 9380135 - Exonic hg19 SKCM TCGA-FS-A1ZG-06A 33 15 CDS-5'UTR Intra-chr p15.2 p15.31 Seq+ 61032 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAP-SEMA5A DAP chr5 10761126 - SEMA5A chr5 9066758 - Exonic hg19 SARC TCGA-FX-A2QS-01A 67 38 Out-of-frame Intra-chr p15.2 p15.31 Seq+ 61033 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAP-SNX9 DAP chr5 10748287 - SNX9 chr6 158327160 + Exonic hg19 BRCA TCGA-A8-A09X-01A 12 12 In-Frame Inter-chr p15.2 q25.3 Seq+ 61034 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAP3-RPRD2 DAP3 chr1 155691409 - RPRD2 chr1 150437003 + Exonic hg19 SARC TCGA-DX-AB2S-01A 77 23 Out-of-frame Intra-chr q22 q21.2 Seq+ 61035 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAP3-TIPRL DAP3 chr1 155679615 - TIPRL chr1 168160607 + Exonic hg19 BLCA TCGA-XF-A9SY-01A 34 15 In-Frame Intra-chr q22 q24.2 Seq+ 61036 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAPK1-AGTPBP1 DAPK1 chr9 90114054 - AGTPBP1 chr9 88236200 - Exonic hg19 LUAD TCGA-86-8075-01A 7 9 In-Frame Intra-chr q21.33 CAMK:DAPK Tumor suppressor gene q21.33 Seq+ 61037 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAPK1-GRIN2D DAPK1 chr9 90296541 - GRIN2D chr19 48922842 + Exonic hg19 BRCA TCGA-B6-A0I8-01A 13 1 In-Frame Inter-chr q21.33 CAMK:DAPK Tumor suppressor gene q13.33 Seq+ 61038 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAPK2-FAM96A DAPK2 chr15 64332369 - FAM96A chr15 64381050 - Exonic hg19 LIHC TCGA-FV-A495-01A 9 10 Out-of-frame Intra-chr q22.31 CAMK:DAPK Tumor suppressor gene q22.31 Seq+ 61039 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAPK2-FAM96A DAPK2 chr15 64332369 - FAM96A chr15 64367736 - Exonic hg19 PAAD TCGA-IB-A5ST-01A 2 4 Out-of-frame Intra-chr q22.31 CAMK:DAPK Tumor suppressor gene q22.31 Seq+ 61040 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAPP1-COL4A3 DAPP1 chr4 100784229 - COL4A3 chr2 228176502 + Exonic hg19 HNSC TCGA-T2-A6X0-01A 6 3 Out-of-frame Inter-chr q23 q36.3 Seq+ 61041 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAPP1-SLC4A4 DAPP1 chr4 100774505 - SLC4A4 chr4 72399944 + Exonic hg19 LUSC TCGA-85-8070-01A 20 10 In-Frame Intra-chr q23 q13.3 Seq+ 61042 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DARS-MGAT5 DARS chr2 136736844 - MGAT5 chr2 135075100 + Exonic hg19 PRAD TCGA-XK-AAJA-01A 4 1 In-Frame Intra-chr q21.3 q21.2 61043 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DARS-THSD7B DARS chr2 136690353 - THSD7B chr2 138163183 + Exonic hg19 PRAD TCGA-HC-7210-01A 2 3 Out-of-frame Intra-chr q21.3 q22.1 Seq+ 61044 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAZAP1-AC004258.1 DAZAP1 chr19 1428994 - AC004258.1 chr19 1277182 + Exonic hg19 LIHC TCGA-BC-A10T-01A 20 6 Out-of-frame Intra-chr p13.3 61045 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAZAP1-SBNO2 DAZAP1 chr19 1422395 - SBNO2 chr19 1127764 - Exonic hg19 THYM TCGA-XU-A92V-01A 12 4 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 61046 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DAZAP1-ZNF226 DAZAP1 chr19 1422395 - ZNF226 chr19 44679137 + Exonic hg19 ESCA TCGA-L5-A891-01A 16 50 In-Frame Intra-chr p13.3 q13.31 Transcription factor Seq+ 61047 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DBF4B-DYNC2H1 DBF4B chr17 42786734 - DYNC2H1 chr11 103036627 + Exonic hg19 BRCA TCGA-AC-A2FB-01A 5 6 Out-of-frame Inter-chr q21.31 q22.3 Seq+ 61048 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DBNDD1-C19orf20 DBNDD1 chr16 90075192 - C19orf20 chr19 518889 + Exonic hg19 BRCA TCGA-AC-A2BK-01A 3 4 Out-of-frame Inter-chr q24.3 61049 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DBNL-EEA1 DBNL chr7 44101257 - EEA1 chr12 93229203 - Exonic hg19 HNSC TCGA-CR-7382-01A 2 2 Out-of-frame Inter-chr p13 q22 Transcription factor 61050 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DBP-CA11 DBP chr19 49140113 - CA11 chr19 49142878 - Exonic hg19 SKCM TCGA-FS-A1YX-06A 2 5 Out-of-frame Intra-chr q13.33 Transcription factor q13.33 Tumor suppressor gene Seq+ 61051 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAF10-PAX5 DCAF10 chr9 37801402 - PAX5 chr9 37020798 - Exonic hg19 LUSC TCGA-77-8009-01A 3 4 Out-of-frame Intra-chr p13.2 p13.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 61052 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAF12-CNBD1 DCAF12 chr9 34125021 - CNBD1 chr8 88218221 + Exonic hg19 BRCA TCGA-AN-A0XV-01A 3 1 Out-of-frame Inter-chr p13.3 q21.3 61053 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAF15-C19orf57 DCAF15 chr19 14063456 - C19orf57 chr19 14006359 - Exonic hg19 LUSC TCGA-52-7810-01A 6 17 Out-of-frame Intra-chr p13.12 p13.12 Seq+ 61054 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAF15-CEBPG DCAF15 chr19 14065473 - CEBPG chr19 33870050 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 7 5 CDS-5'UTR Intra-chr p13.12 q13.11 Transcription factor Seq+ 61055 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAF4-IFT140 DCAF4 chr14 73404778 - IFT140 chr16 1576797 - Exonic hg19 OV TCGA-29-A5NZ-01A 3 16 In-Frame Inter-chr q24.2 p13.3 Seq+ 61056 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAF5-C14orf148 DCAF5 chr14 69529101 - C14orf148 chr14 77861148 - Exonic hg19 OV TCGA-61-2092-01A 11 6 Out-of-frame Intra-chr q24.1 61057 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAF5-C14orf39 DCAF5 chr14 69558391 - C14orf39 chr14 60938457 - Exonic hg19 LUAD TCGA-78-7143-01A 3 1 Out-of-frame Intra-chr q24.1 q23.1 61058 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAF5-ERH DCAF5 chr14 69619482 - ERH chr14 69853800 - Exonic hg19 LIHC TCGA-DD-A11A-01A 65 23 In-Frame Intra-chr q24.1 q24.1 Seq+ 61059 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAF5-MYO1D DCAF5 chr14 69558391 - MYO1D chr17 31107802 - Exonic hg19 PRAD TCGA-G9-6494-01A 8 1 Out-of-frame Inter-chr q24.1 q11.2 Seq+ 61060 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAF5-PTK2B DCAF5 chr14 69619482 - PTK2B chr8 27169821 + Exonic hg19 PRAD TCGA-HC-7818-01A 5 2 CDS-5'UTR Inter-chr q24.1 p21.2 61061 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAF5-RAB5B DCAF5 chr14 69619482 - RAB5B chr12 56380653 + Exonic hg19 BRCA TCGA-AN-A0AS-01A 10 8 CDS-5'UTR Inter-chr q24.1 q13.2 Seq+ 61062 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAF5-RAD51B DCAF5 chr14 69558391 - RAD51B chr14 68934889 + Exonic hg19 OV TCGA-29-A5NZ-01A 4 37 In-Frame Intra-chr q24.1 q24.1 KB Seq+ 61063 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAF6-BCAS3 DCAF6 chr1 167974031 - BCAS3 chr17 58987893 + Exonic hg19 BLCA TCGA-XF-AAMX-01A 15 15 Out-of-frame Inter-chr q24.2 q23.2 Seq+ 61064 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAF6-HMCN1 DCAF6 chr1 168014465 - HMCN1 chr1 185815158 + Exonic hg19 SARC TCGA-FX-A2QS-01A 43 26 Out-of-frame Intra-chr q24.2 q25.3 Seq+ 61065 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAF6-MPZL1 DCAF6 chr1 167974031 - MPZL1 chr1 167734820 + Exonic hg19 BRCA TCGA-A7-A26G-01A 62 48 In-Frame Intra-chr q24.2 q24.2 KB Seq+ 61066 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAF6-MPZL1 DCAF6 chr1 167921099 - MPZL1 chr1 167734820 + Exonic hg19 BRCA TCGA-C8-A137-01A 2 1 Out-of-frame Intra-chr q24.2 q24.2 KB Seq+ 61067 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAF6-MPZL1 DCAF6 chr1 167974031 - MPZL1 chr1 167734820 + Exonic hg19 PRAD TCGA-G9-A9S0-01A 8 9 In-Frame Intra-chr q24.2 q24.2 KB Seq+ 61068 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAF6-YEATS4 DCAF6 chr1 168014465 - YEATS4 chr12 69783927 + Exonic hg19 SARC TCGA-FX-A2QS-01A 30 26 Out-of-frame Inter-chr q24.2 q15 Seq+ 61069 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAF7-VMP1 DCAF7 chr17 61628176 - VMP1 chr17 57808782 + Exonic hg19 BRCA TCGA-BH-A18R-01A 286 236 CDS-5'UTR Intra-chr q23.3 q23.1 Seq+ 61070 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAF8-AIG1 DCAF8 chr1 160252734 - AIG1 chr6 143486219 + Exonic hg19 SKCM TCGA-EB-A6L9-06A 10 5 5'UTR-CDS Inter-chr q23.2 q24.2 61071 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAF8-ETV3 DCAF8 chr1 160206925 - ETV3 chr1 157106157 - Exonic hg19 SKCM TCGA-ER-A3EV-06A 10 11 CDS-5'UTR Intra-chr q23.2 q23.1 Transcription factor Seq+ 61072 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAF8-FCRLA DCAF8 chr1 160231075 - FCRLA chr1 161682875 + Exonic hg19 BLCA TCGA-ZF-AA5P-01A 20 12 5'UTR-CDS Intra-chr q23.2 q23.3 Seq+ 61073 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAF8-NME7 DCAF8 chr1 160231075 - NME7 chr1 169279318 - Exonic hg19 LUSC TCGA-18-3417-01A 48 48 5'UTR-CDS Intra-chr q23.2 q24.2 Seq+ 61074 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAKD-ADAMTS7 DCAKD chr17 43128921 - ADAMTS7 chr15 79083565 - Exonic hg19 PCPG TCGA-QR-A6GS-01A 4 5 5'UTR-CDS Inter-chr q21.31 q25.1 Seq+ 61075 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAKD-MAP3K14 DCAKD chr17 43128921 - MAP3K14 chr17 43362316 - Exonic hg19 HNSC TCGA-BB-7871-01A 2 2 5'UTR-CDS Intra-chr q21.31 q21.31 61076 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAKD-PLCD3 DCAKD chr17 43138256 - PLCD3 chr17 43198739 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 3 2 5'UTR-CDS Intra-chr q21.31 q21.31 Seq+ 61077 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCAKD-SMAP1 DCAKD chr17 43138256 - SMAP1 chr6 71464683 + Exonic hg19 SKCM TCGA-D3-A8GN-06A 14 7 5'UTR-CDS Inter-chr q21.31 q13 Seq+ 61078 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCBLD1-AC068473.1 DCBLD1 chr6 117865740 - AC068473.1 chr18 77420804 - Exonic hg19 LGG TCGA-FG-5965-02A 4 2 Out-of-frame Inter-chr q22.1 q23 61079 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCBLD1-CCT2 DCBLD1 chr6 117825142 - CCT2 chr12 69985839 + Exonic hg19 SARC TCGA-3B-A9HL-01A 577 449 In-Frame Inter-chr q22.1 q15 Seq+ 61080 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCBLD2-ABI3BP DCBLD2 chr3 98619966 - ABI3BP chr3 100499053 - Exonic hg19 LUSC TCGA-92-7341-01A 21 17 In-Frame Intra-chr q12.1 q12.2 Seq+ 61081 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCBLD2-KALRN DCBLD2 chr3 98568305 - KALRN chr3 124193510 + Exonic hg19 LUSC TCGA-60-2704-01A 2 5 Out-of-frame Intra-chr q12.1 q21.1 Seq+ 61082 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCBLD2-ST3GAL6 DCBLD2 chr3 98600384 - ST3GAL6 chr3 98487274 + Exonic hg19 LUAD TCGA-05-4427-01A 13 5 CDS-5'UTR Intra-chr q12.1 q12.1 Seq+ 61083 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCHS2-C22orf45 DCHS2 chr4 155410456 - C22orf45 chr22 24838108 - Exonic hg19 LIHC TCGA-DD-A1EJ-01A 2 1 CDS-3'UTR Inter-chr 61084 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCHS2-C4orf32 DCHS2 chr4 155410456 - C4orf32 chr4 113107849 + Exonic hg19 SKCM TCGA-W3-A825-06A 6 1 In-Frame Intra-chr q25 61085 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCHS2-FGG DCHS2 chr4 155410456 - FGG chr4 155533353 - Exonic hg19 LUAD TCGA-49-6743-01A 217 133 In-Frame Intra-chr q32.1 Seq+ 61086 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCK-GRSF1 DCK chr4 71863899 - GRSF1 chr4 71702031 - Exonic hg19 BRCA TCGA-BH-A1F2-01A 40 14 In-Frame Intra-chr q13.3 q13.3 Seq+ 61087 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCLK1-CLDN10 DCLK1 chr13 36686006 - CLDN10 chr13 96212386 + Exonic hg19 SARC TCGA-DX-A8BV-01A 20 10 Out-of-frame Intra-chr q13.3 CAMK:DCAMKL q32.1 Seq+ 61088 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCLK1-RCBTB1 DCLK1 chr13 36445361 - RCBTB1 chr13 50108398 - Exonic hg19 BRCA TCGA-A2-A0CW-01A 6 3 Out-of-frame Intra-chr q13.3 CAMK:DCAMKL q14.2 Seq+ 61089 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCLK1-SERPINE3 DCLK1 chr13 36686006 - SERPINE3 chr13 51935414 + Exonic hg19 BRCA TCGA-A8-A09V-01A 15 2 Out-of-frame Intra-chr q13.3 CAMK:DCAMKL q14.3 Seq+ 61090 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCLK2-LRBA DCLK2 chr4 151023964 - LRBA chr4 151247050 - Exonic hg19 ACC TCGA-OR-A5LH-01A 11 3 In-Frame Intra-chr q31.23 CAMK:DCAMKL q31.3 Seq+ 61091 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCLK2-UST DCLK2 chr4 151000600 - UST chr6 149394969 + Exonic hg19 SKCM TCGA-ER-A19H-06A 13 15 In-Frame Inter-chr q31.23 CAMK:DCAMKL q25.1 Seq+ 61092 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCLRE1B-DNAJB4 DCLRE1B chr1 114448397 - DNAJB4 chr1 78481698 + Exonic hg19 LUAD TCGA-MP-A4TE-01A 11 13 In-Frame Intra-chr p13.2 p31.1 Tumor suppressor gene Seq+ 61093 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCP2-C8orf34 DCP2 chr5 112312683 - C8orf34 chr8 69728121 + Exonic hg19 SKCM TCGA-BF-AAP6-01A 198 1 Out-of-frame Inter-chr q22.2 q13.2 Seq+ 61094 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCP2-IL17B DCP2 chr5 112328467 - IL17B chr5 148756588 - Exonic hg19 ACC TCGA-P6-A5OF-01A 22 11 In-Frame Intra-chr q22.2 q32 Seq+ 61095 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCPS-TIRAP DCPS chr11 126176639 - TIRAP chr11 126160357 + Exonic hg19 SKCM TCGA-ER-A195-06A 3 5 CDS-5'UTR Intra-chr q24.2 q24.2 Seq+ 61096 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCTD-ECE2 DCTD chr4 183836076 - ECE2 chr3 184001573 + Exonic hg19 GBM TCGA-06-0644-01A 10 23 Out-of-frame Inter-chr q35.1 q27.1 Seq+ 61097 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCTN1-C2orf65 DCTN1 chr2 74605127 - C2orf65 chr2 74867454 - Exonic hg19 STAD TCGA-BR-7716-01A 3 21 CDS-5'UTR Intra-chr p13.1 61098 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCTN1-WDR54 DCTN1 chr2 74618921 - WDR54 chr2 74649997 + Exonic hg19 MESO TCGA-SH-A7BD-01A 4 13 5'UTR-CDS Intra-chr p13.1 p13.1 Seq+ 61099 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCTN2-DDX23 DCTN2 chr12 57939811 - DDX23 chr12 49230049 - Exonic hg19 LUSC TCGA-85-6175-01A 211 128 In-Frame Intra-chr q13.3 q13.12 Seq+ 61100 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCTN2-DENND3 DCTN2 chr12 57925798 - DENND3 chr8 142160933 + Exonic hg19 LGG TCGA-P5-A72U-01A 39 23 Out-of-frame Inter-chr q13.3 q24.3 Seq+ 61101 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCTN2-EEA1 DCTN2 chr12 57924094 - EEA1 chr12 93229203 - Exonic hg19 SARC TCGA-DX-A23R-01A 9 28 3'UTR-CDS Intra-chr q13.3 q22 Transcription factor 61102 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCTN2-SRGAP1 DCTN2 chr12 57940811 - SRGAP1 chr12 64377727 + Exonic hg19 SARC TCGA-DX-A3LY-01B 591 395 Out-of-frame Intra-chr q13.3 q14.2 Seq+ 61103 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCUN1D1-CCDC50 DCUN1D1 chr3 182679014 - CCDC50 chr3 191074877 + Exonic hg19 BRCA TCGA-AO-A0JM-01A 7 19 In-Frame Intra-chr q26.33 Oncogene q28 Seq+ 61104 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCUN1D2-ATP11A DCUN1D2 chr13 114134890 - ATP11A chr13 113439449 + Exonic hg19 SARC TCGA-KF-A41W-01A 19 14 Out-of-frame Intra-chr q34 q34 61105 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCUN1D3-TMEM159 DCUN1D3 chr16 20911526 - TMEM159 chr16 21172406 + Exonic hg19 BLCA TCGA-GC-A4ZW-01A 8 2 5'UTR-5'UTR Intra-chr p12.3 Tumor suppressor gene 61106 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCUN1D4-IKZF1 DCUN1D4 chr4 52758017 - IKZF1 chr7 50444231 + Exonic hg19 SARC TCGA-IE-A4EJ-01A 19 19 Out-of-frame Inter-chr q12 p12.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 61107 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCUN1D4-PTPRT DCUN1D4 chr4 52777340 - PTPRT chr20 41101202 - Exonic hg19 SKCM TCGA-D3-A1Q9-06A 3 1 Out-of-frame Inter-chr q12 q13.11 Oncogene Tumor suppressor gene 61108 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCUN1D4-SGCB DCUN1D4 chr4 52709433 - SGCB chr4 52899806 - Exonic hg19 LGG TCGA-CS-6665-01A 68 37 Out-of-frame Intra-chr q12 q12 Seq+ 61109 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCUN1D4-USP46 DCUN1D4 chr4 52752804 - USP46 chr4 53476783 - Exonic hg19 SKCM TCGA-ER-A19B-06A 22 13 In-Frame Intra-chr q12 q12 Seq+ 61110 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DCX-PASD1 DCX chrX 110574147 - PASD1 chrX 150828185 + Exonic hg19 KIRC TCGA-CJ-5681-01A 212 252 Out-of-frame Intra-chr q23 q28 Seq+ 61111 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDA1-MYO9B DDA1 chr19 17420466 - MYO9B chr19 17311448 + Exonic hg19 UCEC TCGA-AJ-A2QM-01A 9 5 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 61112 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDA1-MYO9B DDA1 chr19 17426804 - MYO9B chr19 17270205 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 6 3 In-Frame Intra-chr p13.11 p13.11 Seq+ 61113 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDAH1-WDR63 DDAH1 chr1 86043667 - WDR63 chr1 85587434 + Exonic hg19 MESO TCGA-TS-A8AF-01A 2 1 5'UTR-CDS Intra-chr p22.3 p22.3 61114 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDAH1-ZNHIT6 DDAH1 chr1 85930426 - ZNHIT6 chr1 86119781 - Exonic hg19 BRCA TCGA-AC-A6IW-01A 19 22 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 61115 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDAH2-SLC44A4 DDAH2 chr6 31697828 - SLC44A4 chr6 31833561 - Exonic hg19 ESCA TCGA-2H-A9GJ-01A 17 51 5'UTR-CDS Intra-chr Seq+ 61116 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDB1-C11orf10 DDB1 chr11 61076455 - C11orf10 chr11 61556707 - Exonic hg19 BRCA TCGA-AR-A256-01A 111 166 CDS-3'UTR Intra-chr q12.2 Seq+ 61117 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDB1-CPSF7 DDB1 chr11 61099015 - CPSF7 chr11 61189080 - Exonic hg19 LIHC TCGA-BC-A10Y-01A 26 12 In-Frame Intra-chr q12.2 q12.2 Seq+ 61118 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDB1-CPSF7 DDB1 chr11 61080971 - CPSF7 chr11 61183991 - Exonic hg19 ESCA TCGA-L5-A8NI-01A 3 21 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 61119 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDB1-SDHA DDB1 chr11 61080971 - SDHA chr5 235259 + Exonic hg19 SARC TCGA-3R-A8YX-01A 35 28 In-Frame Inter-chr q12.2 p15.33 Oncogene Tumor suppressor gene Seq+ 61120 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDB1-STX3 DDB1 chr11 61091451 - STX3 chr11 59540684 + Exonic hg19 HNSC TCGA-QK-A6VB-01A 46 35 In-Frame Intra-chr q12.2 q12.1 Seq+ 61121 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDHD2-PPAPDC1B DDHD2 chr8 38103468 - PPAPDC1B chr8 38123829 - Exonic hg19 LUSC TCGA-85-7698-01A 24 13 In-Frame Intra-chr p11.23 61122 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDI2-C4BPB DDI2 chr1 15944303 - C4BPB chr1 207262827 + Exonic hg19 LIHC TCGA-G3-A7M7-01A 67 68 CDS-5'UTR Intra-chr p36.21 q32.1 Seq+ 61123 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDI2-MTOR DDI2 chr1 15944303 - MTOR chr1 11227574 - Exonic hg19 LUAD TCGA-MP-A4SW-01A 22 13 Out-of-frame Intra-chr p36.21 p36.22 Oncogene Seq+ 61124 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDIT3-GLI1 DDIT3 chr12 57914201 - GLI1 chr12 57857448 + Exonic hg19 GBM TCGA-06-5859-01A 2 12 5'UTR-5'UTR Intra-chr q13.3 Oncogene Transcription factor q13.3 Tumor suppressor gene Transcription factor Seq+ 61125 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDIT4-EIF2AK2 DDIT4 chr10 74035794 - EIF2AK2 chr2 37342384 - Exonic hg19 LUSC TCGA-34-5241-01A 2 5 Out-of-frame Inter-chr q22.1 p22.2 61126 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDR1-PAK1 DDR1 chr6 30861200 - PAK1 chr11 77070062 - Exonic hg19 OV TCGA-13-1477-01A 17 14 In-Frame Inter-chr TK:DDR q14.1 STE:STE20 Seq+ 61127 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDR2-CHD1L DDR2 chr1 162625164 - CHD1L chr1 146724278 + Exonic hg19 SARC TCGA-3B-A9HO-01A 9 5 5'UTR-5'UTR Intra-chr q23.3 TK:DDR Oncogene Tumor suppressor gene q21.1 Seq+ 61128 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDR2-FMO4 DDR2 chr1 162625164 - FMO4 chr1 171293277 + Exonic hg19 SKCM TCGA-EB-A430-01A 66 23 5'UTR-CDS Intra-chr q23.3 TK:DDR Oncogene Tumor suppressor gene q24.3 Seq+ 61129 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDR2-GAB1 DDR2 chr1 162688935 - GAB1 chr4 144336630 + Exonic hg19 BRCA TCGA-BH-A18V-01A 3 8 Out-of-frame Inter-chr q23.3 TK:DDR Oncogene Tumor suppressor gene q31.21 Seq+ 61130 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX10-ARNTL DDX10 chr11 108594189 - ARNTL chr11 13387047 + Exonic hg19 PRAD TCGA-EJ-7321-01A 4 4 In-Frame Intra-chr q22.3 p15.3 Tumor suppressor gene Transcription factor 61131 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX17-ARFGEF2 DDX17 chr22 38879445 - ARFGEF2 chr20 47615777 + Exonic hg19 PRAD TCGA-EJ-7782-01A 2 2 Out-of-frame Inter-chr q13.1 q13.13 61132 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX17-CPT1B DDX17 chr22 38894090 - CPT1B chr22 51010551 - Exonic hg19 SKCM TCGA-EE-A2MU-06A 16 10 In-Frame Intra-chr q13.1 q13.33 Seq+ 61133 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX17-DMC1 DDX17 chr22 38901956 - DMC1 chr22 38934617 - Exonic hg19 KIRP TCGA-P4-A5EB-01A 11 2 Out-of-frame Intra-chr q13.1 q13.1 61134 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX17-EIF2AK2 DDX17 chr22 38879445 - EIF2AK2 chr2 37342384 - Exonic hg19 STAD TCGA-BR-8484-01A 2 1 Out-of-frame Inter-chr q13.1 p22.2 61135 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX17-ENTHD1 DDX17 chr22 38889715 - ENTHD1 chr22 40161614 - Exonic hg19 LIHC TCGA-KR-A7K8-01A 19 4 In-Frame Intra-chr q13.1 q13.1 Seq+ 61136 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX19A-ABCC11 DDX19A chr16 70384508 - ABCC11 chr16 48269088 - Exonic hg19 LUAD TCGA-91-6847-01A 2 6 CDS-5'UTR Intra-chr q22.1 q12.1 Seq+ 61137 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX19A-CIRH1A DDX19A chr16 70390150 - CIRH1A chr16 69167361 + Exonic hg19 KIRC TCGA-BP-5192-01A 2 2 CDS-5'UTR Intra-chr q22.1 Seq+ 61138 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX19B-KCTD19 DDX19B chr16 70333257 - KCTD19 chr16 67354788 - Exonic hg19 KIRC TCGA-BP-5192-01A 11 3 In-Frame Intra-chr q22.1 q22.1 Seq+ 61139 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX19B-ST3GAL2 DDX19B chr16 70333257 - ST3GAL2 chr16 70433436 - Exonic hg19 LIHC TCGA-DD-AAE2-01A 2 1 5'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 61140 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX20-TBX15 DDX20 chr1 112303470 - TBX15 chr1 119428139 - Exonic hg19 LAML TCGA-AB-2857-03A 5 3 In-Frame Intra-chr p13.2 p12 Transcription factor Seq+ 61141 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX23-ARF3 DDX23 chr12 49245867 - ARF3 chr12 49297691 - Exonic hg19 LUAD TCGA-49-4506-01A 10 11 5'UTR-3'UTR Intra-chr q13.12 q13.12 61142 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX23-NMNAT2 DDX23 chr12 49245867 - NMNAT2 chr1 183262928 - Exonic hg19 PRAD TCGA-M7-A720-01A 3 3 5'UTR-CDS Inter-chr q13.12 q25.3 Seq+ 61143 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX23-RND1 DDX23 chr12 49245867 - RND1 chr12 49255901 - Exonic hg19 LIHC TCGA-ZS-A9CF-01A 2 7 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 61144 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX23-RND1 DDX23 chr12 49245867 - RND1 chr12 49255901 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 5 7 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 61145 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX31-AK8 DDX31 chr9 135501051 - AK8 chr9 135602921 - Exonic hg19 BRCA TCGA-C8-A132-01A 6 1 Out-of-frame Intra-chr q34.13 q34.13 Seq+ 61146 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX39B-C6orf10 DDX39B chr6 31506540 - C6orf10 chr6 32337760 - Exonic hg19 UCEC TCGA-A5-A7WK-01A 10 14 In-Frame Intra-chr Seq+ 61147 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX39B-ETV7 DDX39B chr6 31503144 - ETV7 chr6 36353446 - Exonic hg19 PAAD TCGA-XN-A8T5-01A 9 5 In-Frame Intra-chr p21.31 Transcription factor Seq+ 61148 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX39B-PRPH2 DDX39B chr6 31506540 - PRPH2 chr6 42672349 - Exonic hg19 BRCA TCGA-AR-A1AY-01A 35 39 Out-of-frame Intra-chr p21.1 Seq+ 61149 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX42-BRIP1 DDX42 chr17 61884014 - BRIP1 chr17 59886118 - Exonic hg19 BRCA TCGA-A2-A25B-01A 33 18 In-Frame Intra-chr q23.3 q23.2 Oncogene Seq+ 61150 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX42-DCAF7 DDX42 chr17 61851736 - DCAF7 chr17 61655831 + Exonic hg19 BRCA TCGA-AN-A0FW-01A 50 13 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 61151 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX42-RPS6KB1 DDX42 chr17 61882535 - RPS6KB1 chr17 57987923 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 64 52 In-Frame Intra-chr q23.3 q23.1 Oncogene Seq+ 61152 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX46-CDC25C DDX46 chr5 134094645 - CDC25C chr5 137666907 - Exonic hg19 UCEC TCGA-PG-A5BC-01A 13 7 CDS-5'UTR Intra-chr q31.1 q31.2 Seq+ 61153 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX46-SEC24A DDX46 chr5 134126242 - SEC24A chr5 134010305 + Exonic hg19 UCEC TCGA-EY-A54A-01A 7 7 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 61154 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX47-CREBL2 DDX47 chr12 12967158 - CREBL2 chr12 12788711 + Exonic hg19 PRAD TCGA-CH-5792-01A 9 1 Out-of-frame Intra-chr p13.1 p13.1 Transcription factor Seq+ 61155 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX5-ART1 DDX5 chr17 62499548 - ART1 chr11 3685322 + Exonic hg19 BRCA TCGA-E9-A1RH-01A 167 45 In-Frame Inter-chr q23.3 p15.4 Tumor suppressor gene Seq+ 61156 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX5-PFKP DDX5 chr17 62495741 - PFKP chr10 3177928 + Exonic hg19 LUAD TCGA-86-A4D0-01A 2 2 3'UTR-CDS Inter-chr q23.3 p15.2 61157 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX52-SSH2 DDX52 chr17 35984390 - SSH2 chr17 28030080 - Exonic hg19 STAD TCGA-VQ-A94U-01A 3 11 Out-of-frame Intra-chr q12 q11.2 Seq+ 61158 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX52-STAT5B DDX52 chr17 35988605 - STAT5B chr17 40354826 - Exonic hg19 PAAD TCGA-XD-AAUI-01A 5 3 In-Frame Intra-chr q12 q21.2 Transcription factor Seq+ 61159 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX52-TMIGD1 DDX52 chr17 36002139 - TMIGD1 chr17 28656547 - Exonic hg19 BRCA TCGA-BH-A1EV-01A 9 1 In-Frame Intra-chr q12 q11.2 Seq+ 61160 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX54-IQCD DDX54 chr12 113623083 - IQCD chr12 113633694 - Exonic hg19 BRCA TCGA-D8-A1XK-01A 2 5 In-Frame Intra-chr q24.13 q24.13 61161 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX58-PRSS3 DDX58 chr9 32500803 - PRSS3 chr9 33796641 + Exonic hg19 STAD TCGA-CG-4444-01A 258 315 In-Frame Intra-chr p21.1 Tumor suppressor gene p13.3 Seq+ 61162 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX6-ALK DDX6 chr11 118656761 - ALK chr2 29606725 - Exonic hg19 UCS TCGA-N9-A4Q4-01A 10 1 In-Frame Inter-chr q23.3 p23.1 TK:ALK Oncogene 61163 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX6-FOXR1 DDX6 chr11 118651830 - FOXR1 chr11 118849492 + Exonic hg19 BRCA TCGA-EW-A1P1-01A 2 2 Out-of-frame Intra-chr q23.3 Transcription factor 61164 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX6-TSPAN18 DDX6 chr11 118627880 - TSPAN18 chr11 44927958 + Exonic hg19 LGG TCGA-HT-7686-01A 5 2 CDS-5'UTR Intra-chr q23.3 p11.2 Seq+ 61165 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX60L-CPE DDX60L chr4 169393606 - CPE chr4 166405574 + Exonic hg19 LIHC TCGA-G3-A3CH-01A 4 2 Out-of-frame Intra-chr q32.3 q32.3 Seq+ 61166 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DDX60L-DSCAM DDX60L chr4 169374275 - DSCAM chr21 41559914 - Exonic hg19 OV TCGA-36-1574-01A 11 1 In-Frame Inter-chr q32.3 q22.2 Seq+ 61167 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DEAF1-CHID1 DEAF1 chr11 674536 - CHID1 chr11 870499 - Exonic hg19 STAD TCGA-BR-A452-01A 7 40 Out-of-frame Intra-chr Transcription factor p15.5 Seq+ 61168 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DEAF1-PDDC1 DEAF1 chr11 674536 - PDDC1 chr11 775142 - Exonic hg19 BRCA TCGA-D8-A1JG-01B 21 7 Out-of-frame Intra-chr Transcription factor Seq+ 61169 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DEAF1-PIDD DEAF1 chr11 674536 - PIDD chr11 804463 - Exonic hg19 STAD TCGA-VQ-A92D-01A 2 21 CDS-5'UTR Intra-chr Transcription factor Seq+ 61170 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DEAF1-TMEM80 DEAF1 chr11 686858 - TMEM80 chr11 700615 + Exonic hg19 COAD TCGA-D5-5538-01A 21 6 Out-of-frame Intra-chr Transcription factor p15.5 Seq+ 61171 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DECR1-STAU2 DECR1 chr8 91013789 - STAU2 chr8 74464554 - Exonic hg19 ESCA TCGA-2H-A9GG-01A 18 235 Out-of-frame Intra-chr q21.3 q21.11 Seq+ 61172 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DEF8-FBXO31 DEF8 chr16 90030983 - FBXO31 chr16 87365116 - Exonic hg19 LUAD TCGA-50-6591-01A 2 2 In-Frame Intra-chr q24.3 q24.2 Tumor suppressor gene Seq+ 61173 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DEK-KIF25 DEK chr6 18264074 - KIF25 chr6 168431453 + Exonic hg19 BLCA TCGA-GV-A40E-01A 30 27 Out-of-frame Intra-chr p22.3 Oncogene q27 Seq+ 61174 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DEK-NUP210L DEK chr6 18249882 - NUP210L chr1 154000073 - Exonic hg19 BRCA TCGA-LD-A9QF-01A 4 2 In-Frame Inter-chr p22.3 Oncogene q21.3 Seq+ 61175 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DEM1-MTF1 DEM1 chr1 40974580 - MTF1 chr1 38323381 - Exonic hg19 SARC TCGA-DX-A6YS-01A 13 9 5'UTR-5'UTR Intra-chr p34.3 Transcription factor 61176 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND1A-ASTN2 DENND1A chr9 126319849 - ASTN2 chr9 119188367 - Exonic hg19 LGG TCGA-DH-A66B-01A 28 10 Out-of-frame Intra-chr q33.3 q33.1 Seq+ 61177 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND1A-CADPS2 DENND1A chr9 126414292 - CADPS2 chr7 122377122 - Exonic hg19 BRCA TCGA-D8-A1JI-01A 14 17 In-Frame Inter-chr q33.3 q31.32 Seq+ 61178 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND1A-CDK5RAP2 DENND1A chr9 126519982 - CDK5RAP2 chr9 123334319 - Exonic hg19 SARC TCGA-HB-A3L4-01A 13 5 In-Frame Intra-chr q33.3 q33.2 61179 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND1A-ENG DENND1A chr9 126319849 - ENG chr9 130581111 - Exonic hg19 HNSC TCGA-CV-A45T-01A 5 3 In-Frame Intra-chr q33.3 q34.11 Seq+ 61180 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND1A-LRRC69 DENND1A chr9 126519982 - LRRC69 chr8 92231118 + Exonic hg19 BRCA TCGA-A2-A0T1-01A 16 17 Out-of-frame Inter-chr q33.3 q21.3 Seq+ 61181 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND1A-NDUFA8 DENND1A chr9 126371715 - NDUFA8 chr9 124914687 - Exonic hg19 HNSC TCGA-H7-A76A-01A 10 10 In-Frame Intra-chr q33.3 q33.2 Seq+ 61182 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND1A-PRRX2 DENND1A chr9 126345448 - PRRX2 chr9 132481510 + Exonic hg19 HNSC TCGA-CV-7438-01A 14 9 Out-of-frame Intra-chr q33.3 q34.11 Transcription factor Seq+ 61183 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND1A-PSMB7 DENND1A chr9 126554866 - PSMB7 chr9 127146935 - Exonic hg19 UCEC TCGA-AX-A3FX-01A 28 25 Out-of-frame Intra-chr q33.3 q33.3 Seq+ 61184 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND1A-PSMB7 DENND1A chr9 126345448 - PSMB7 chr9 127119194 - Exonic hg19 SKCM TCGA-EE-A2MC-06A 62 64 In-Frame Intra-chr q33.3 q33.3 Seq+ 61185 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND1A-PSMB7 DENND1A chr9 126414292 - PSMB7 chr9 127146935 - Exonic hg19 UCS TCGA-N5-A4RT-01A 24 14 Out-of-frame Intra-chr q33.3 q33.3 Seq+ 61186 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND1A-RRAGB DENND1A chr9 126641230 - RRAGB chrX 55745747 + Exonic hg19 LUSC TCGA-85-7710-01A 8 2 Out-of-frame Inter-chr q33.3 p11.21 Seq+ 61187 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND1A-SCUBE1 DENND1A chr9 126554866 - SCUBE1 chr22 43735241 - Exonic hg19 UCS TCGA-N5-A4RD-01A 3 3 Out-of-frame Inter-chr q33.3 q13.2 61188 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND1B-ATP6V1G3 DENND1B chr1 197684161 - ATP6V1G3 chr1 198498311 - Exonic hg19 STAD TCGA-VQ-A92D-01A 4 16 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 61189 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND1B-CRB1 DENND1B chr1 197509094 - CRB1 chr1 197390130 + Exonic hg19 SARC TCGA-3R-A8YX-01A 3 2 Out-of-frame Intra-chr q31.3 q31.3 61190 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND1B-FAM190A DENND1B chr1 197741998 - FAM190A chr4 91736913 + Exonic hg19 BRCA TCGA-BH-A0DD-01A 28 17 Out-of-frame Inter-chr q31.3 Seq+ 61191 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND1B-RCOR3 DENND1B chr1 197684161 - RCOR3 chr1 211432921 + Exonic hg19 LUAD TCGA-50-5932-01A 7 2 In-Frame Intra-chr q31.3 q32.2 Seq+ 61192 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND1B-RGL1 DENND1B chr1 197741998 - RGL1 chr1 183666538 + Exonic hg19 LUSC TCGA-18-3407-01A 5 1 CDS-5'UTR Intra-chr q31.3 q25.3 Seq+ 61193 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND1B-RRP15 DENND1B chr1 197741998 - RRP15 chr1 218475636 + Exonic hg19 BRCA TCGA-OK-A5Q2-01A 10 4 In-Frame Intra-chr q31.3 q41 Seq+ 61194 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND1B-TSPAN31 DENND1B chr1 197741998 - TSPAN31 chr12 58140372 + Exonic hg19 SARC TCGA-DX-A1KU-01A 73 40 Out-of-frame Inter-chr q31.3 q14.1 Seq+ 61195 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND2C-AMPD1 DENND2C chr1 115212604 - AMPD1 chr1 115218624 - Exonic hg19 BRCA TCGA-AR-A0TP-01A 4 1 5'UTR-CDS Intra-chr p13.2 p13.2 61196 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND3-MARCH11 DENND3 chr8 142161936 - 2019_ 3_ 11_ chr5 16091190 - Exonic hg19 LUAD TCGA-L9-A8F4-01A 2 1 Out-of-frame Inter-chr q24.3 p15.1 61197 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND4A-SLC24A1 DENND4A chr15 65982753 - SLC24A1 chr15 65947068 + Exonic hg19 HNSC TCGA-P3-A6T6-01A 7 6 CDS-3'UTR Intra-chr q22.31 q22.31 61198 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND4C-RHOBTB2 DENND4C chr9 19357152 - RHOBTB2 chr8 22861938 + Exonic hg19 PRAD TCGA-EJ-7785-01A 8 5 In-Frame Inter-chr p22.1 p21.3 Tumor suppressor gene Seq+ 61199 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND5A-PGPEP1L DENND5A chr11 9286508 - PGPEP1L chr15 99514387 - Exonic hg19 BRCA TCGA-A8-A08G-01A 7 6 Out-of-frame Inter-chr p15.4 q26.3 Seq+ 61200 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND5A-SBF2 DENND5A chr11 9215041 - SBF2 chr11 9879943 - Exonic hg19 BRCA TCGA-D8-A1XT-01A 50 24 In-Frame Intra-chr p15.4 p15.4 Seq+ 61201 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND5B-C12orf11 DENND5B chr12 31562197 - C12orf11 chr12 27059370 - Exonic hg19 UCS TCGA-ND-A4W6-01A 2 1 Out-of-frame Intra-chr p11.21 61202 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND5B-NUP54 DENND5B chr12 31743640 - NUP54 chr4 77039347 - Exonic hg19 BRCA TCGA-AO-A12D-01A 3 1 Out-of-frame Inter-chr p11.21 q21.1 61203 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENND5B-PLCZ1 DENND5B chr12 31648744 - PLCZ1 chr12 18890443 - Exonic hg19 LGG TCGA-HT-7884-01B 2 2 CDS-5'UTR Intra-chr p11.21 p12.3 61204 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DENR-KNTC1 DENR chr12 123249934 - KNTC1 chr12 123078823 + Exonic hg19 LUAD TCGA-50-5946-01A 6 16 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 61205 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DEPDC1B-ELOVL7 DEPDC1B chr5 59995873 - ELOVL7 chr5 60083258 - Exonic hg19 ESCA TCGA-VR-AA7D-01A 4 5 CDS-5'UTR Intra-chr q12.1 q12.1 Seq+ 61206 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DEPDC1B-ERCC8 DEPDC1B chr5 59995873 - ERCC8 chr5 60170510 - Exonic hg19 STAD TCGA-BR-7716-01A 3 2 In-Frame Intra-chr q12.1 q12.1 61207 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DEPDC5-BID DEPDC5 chr22 32154619 - BID chr22 18232940 - Exonic hg19 UCEC TCGA-AJ-A3EM-01A 89 67 In-Frame Intra-chr q12.2 q11.21 Seq+ 61208 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DEPDC5-CDH19 DEPDC5 chr22 32270391 - CDH19 chr18 64239553 - Exonic hg19 BRCA TCGA-E2-A1IO-01A 3 3 CDS-5'UTR Inter-chr q12.2 q22.1 61209 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DEPDC5-SFI1 DEPDC5 chr22 32215211 - SFI1 chr22 31924676 + Exonic hg19 BRCA TCGA-D8-A140-01A 7 2 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 61210 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DEPTOR-ENPP2 DEPTOR chr8 120977650 - ENPP2 chr8 120577195 - Exonic hg19 BRCA TCGA-E9-A1RH-01A 28 14 In-Frame Intra-chr q24.12 q24.12 Seq+ 61211 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DEPTOR-RP11-383H13.1 DEPTOR chr8 121021372 - RP11-383H13.1 chr8 72964774 + Exonic hg19 PAAD TCGA-HZ-A9TJ-01A 2 4 Out-of-frame Intra-chr q24.12 61212 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DEPTOR-SAMD12 DEPTOR chr8 120942178 - SAMD12 chr8 119209971 - Exonic hg19 LUSC TCGA-77-8009-01A 2 2 Out-of-frame Intra-chr q24.12 q24.12 61213 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DERA-CA3 DERA chr12 16064348 - CA3 chr8 86351941 + Exonic hg19 SARC TCGA-X6-A8C6-01A 7 9 In-Frame Inter-chr p12.3 q21.2 Seq+ 61214 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DERA-DNAJA2 DERA chr12 16064348 - DNAJA2 chr16 47005867 - Exonic hg19 SARC TCGA-DX-A23R-01A 7 5 Out-of-frame Inter-chr p12.3 q11.2 Seq+ 61215 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DERA-LRP6 DERA chr12 16135370 - LRP6 chr12 12302087 - Exonic hg19 BRCA TCGA-EW-A1J6-01A 12 15 Out-of-frame Intra-chr p12.3 Seq+ 61216 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DERA-STRAP DERA chr12 16064348 - STRAP chr12 16053881 + Exonic hg19 LGG TCGA-E1-A7YU-01A 26 57 In-Frame Intra-chr p12.3 p12.3 Seq+ 61217 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DERL1-C6orf132 DERL1 chr8 124054210 - C6orf132 chr6 42078029 - Exonic hg19 OV TCGA-24-1604-01A 21 6 In-Frame Inter-chr q24.13 p21.1 Seq+ 61218 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGAT2-TMEM126A DGAT2 chr11 75480157 - TMEM126A chr11 85361293 + Exonic hg19 SKCM TCGA-ER-A197-06A 3 5 CDS-5'UTR Intra-chr q13.5 q14.1 Seq+ 61219 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGCR2-ANO1 DGCR2 chr22 19109641 - ANO1 chr11 69949172 + Exonic hg19 HNSC TCGA-CR-7399-01A 79 40 Out-of-frame Inter-chr q11.21 q13.3 Seq+ 61220 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGCR2-CLTCL1 DGCR2 chr22 19076881 - CLTCL1 chr22 19263353 - Exonic hg19 BRCA TCGA-A7-A26G-01A 9 7 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 61221 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGCR2-CLTCL1 DGCR2 chr22 19076881 - CLTCL1 chr22 19178947 - Exonic hg19 BRCA TCGA-A7-A4SC-01A 5 4 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 61222 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGCR2-EHBP1 DGCR2 chr22 19052361 - EHBP1 chr2 63220665 + Exonic hg19 LUAD TCGA-91-6840-01A 6 2 Out-of-frame Inter-chr q11.21 p15 Seq+ 61223 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGCR2-GNB1L DGCR2 chr22 19052361 - GNB1L chr22 19776483 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 112 96 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 61224 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGCR2-IRX4 DGCR2 chr22 19109641 - IRX4 chr5 1882861 - Exonic hg19 SKCM TCGA-D3-A1Q3-06A 4 2 CDS-5'UTR Inter-chr q11.21 p15.33 Transcription factor Seq+ 61225 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGCR2-PPPDE2 DGCR2 chr22 19028571 - PPPDE2 chr22 42003865 - Exonic hg19 BRCA TCGA-BH-A0EE-01A 29 22 In-Frame Intra-chr q11.21 Seq+ 61226 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGCR2-SEC63 DGCR2 chr22 19023801 - SEC63 chr6 108214782 - Exonic hg19 BRCA TCGA-A8-A083-01A 2 2 Out-of-frame Inter-chr q11.21 q21 61227 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGCR2-SLC25A1 DGCR2 chr22 19050715 - SLC25A1 chr22 19164463 - Exonic hg19 STAD TCGA-CD-8526-01A 2 9 In-Frame Intra-chr q11.21 q11.21 Seq+ 61228 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGCR8-COMT DGCR8 chr22 20067906 - COMT chr22 19950050 + Exonic hg19 BLCA TCGA-UY-A78K-01A 52 23 5'UTR-5'UTR Intra-chr q11.21 q11.21 Seq+ 61229 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGCR8-CRKL DGCR8 chr22 20096526 - CRKL chr22 21288067 + Exonic hg19 LUSC TCGA-46-3765-01A 17 1 Out-of-frame Intra-chr q11.21 q11.21 Oncogene Seq+ 61230 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGCR8-DGCR14 DGCR8 chr22 20082318 - DGCR14 chr22 19127242 - Exonic hg19 COAD TCGA-A6-5657-01A 5 1 In-Frame Intra-chr q11.21 q11.21 61231 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGCR8-ITGA2 DGCR8 chr22 20080430 - ITGA2 chr5 52385776 + Exonic hg19 SKCM TCGA-EB-A5KH-06A 2 1 Out-of-frame Inter-chr q11.21 q11.2 61232 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGCR8-SGSM1 DGCR8 chr22 20067906 - SGSM1 chr22 25240864 + Exonic hg19 HNSC TCGA-CV-6948-01A 20 11 5'UTR-CDS Intra-chr q11.21 q11.23 Seq+ 61233 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGKD-ATG16L1 DGKD chr2 234263320 - ATG16L1 chr2 234164748 + Exonic hg19 LUSC TCGA-22-1017-01A 9 3 Out-of-frame Intra-chr Seq+ 61234 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGKD-ATG16L1 DGKD chr2 234299129 - ATG16L1 chr2 234186214 + Exonic hg19 STAD TCGA-BR-4369-01A 6 4 In-Frame Intra-chr Seq+ 61235 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGKD-INPP5D DGKD chr2 234372929 - INPP5D chr2 234098496 + Exonic hg19 STAD TCGA-VQ-A8E0-01A 3 67 In-Frame Intra-chr Seq+ 61236 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGKD-NDUFA10 DGKD chr2 234299129 - NDUFA10 chr2 240961757 - Exonic hg19 SARC TCGA-DX-A3LY-01B 12 3 In-Frame Intra-chr Seq+ 61237 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGKD-SAG DGKD chr2 234299129 - SAG chr2 234217808 + Exonic hg19 LUAD TCGA-91-8499-01A 22 16 CDS-5'UTR Intra-chr Seq+ 61238 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGKD-SAG DGKD chr2 234299129 - SAG chr2 234243608 + Exonic hg19 ESCA TCGA-L5-A8NI-01A 6 39 Out-of-frame Intra-chr Seq+ 61239 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGKD-SAG DGKD chr2 234263320 - SAG chr2 234255453 + Exonic hg19 ACC TCGA-OR-A5JY-01A 3 1 Out-of-frame Intra-chr Seq+ 61240 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGKD-SLC25A17 DGKD chr2 234299129 - SLC25A17 chr22 41175129 - Exonic hg19 UCS TCGA-N8-A4PQ-01A 21 13 Out-of-frame Inter-chr q13.2 Seq+ 61241 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGKD-SP140 DGKD chr2 234263320 - SP140 chr2 231101798 + Exonic hg19 BRCA TCGA-A8-A084-01A 8 10 Out-of-frame Intra-chr q37.1 Transcription factor Seq+ 61242 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGKE-EPN3 DGKE chr17 54912620 - EPN3 chr17 48618154 + Exonic hg19 LUSC TCGA-43-2581-01A 18 6 Out-of-frame Intra-chr q22 q21.33 Seq+ 61243 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGKE-KRT222 DGKE chr17 54912620 - KRT222 chr17 38814002 - Exonic hg19 BRCA TCGA-C8-A275-01A 118 91 In-Frame Intra-chr q22 q21.2 Seq+ 61244 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGKG-CRYGS DGKG chr3 186079735 - CRYGS chr3 186257386 - Exonic hg19 OV TCGA-13-0887-01A 7 3 5'UTR-CDS Intra-chr q27.3 q27.3 Seq+ 61245 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGKH-MED13L DGKH chr13 42795530 - MED13L chr12 116460406 - Exonic hg19 BRCA TCGA-E2-A15A-01A 5 1 Out-of-frame Inter-chr q14.11 q24.21 Seq+ 61246 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGKH-MED13L DGKH chr13 42795530 - MED13L chr12 116460406 - Exonic hg19 BRCA TCGA-E2-A15A-06A 8 5 Out-of-frame Inter-chr q14.11 q24.21 Seq+ 61247 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGKQ-POLN DGKQ chr4 980594 - POLN chr4 2097660 - Exonic hg19 LIHC TCGA-DD-A113-01A 9 7 5'UTR-CDS Intra-chr p16.3 p16.3 Seq+ 61248 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGUOK-ACTG2 DGUOK chr2 74177859 - ACTG2 chr2 74129487 + Exonic hg19 BLCA TCGA-BT-A3PJ-01A 44 27 In-Frame Intra-chr p13.1 p13.1 Seq+ 61249 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGUOK-C2orf78 DGUOK chr2 74154179 - C2orf78 chr2 74040604 + Exonic hg19 BRCA TCGA-AC-A8OQ-01A 10 8 In-Frame Intra-chr p13.1 p13.1 Seq+ 61250 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGUOK-STAMBP DGUOK chr2 74154179 - STAMBP chr2 74086381 + Exonic hg19 BLCA TCGA-DK-A2I1-01A 15 10 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 61251 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DGUOK-STAMBP DGUOK chr2 74174033 - STAMBP chr2 74100479 + Exonic hg19 LUSC TCGA-NC-A5HL-01A 46 23 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 61252 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHCR24-C9orf102 DHCR24 chr1 55315306 - C9orf102 chr9 98774507 + Exonic hg19 PRAD TCGA-HC-A6AN-01A 3 2 Out-of-frame Inter-chr p32.3 61253 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHCR24-CBS DHCR24 chr1 55315306 - CBS chr21 44476011 - Exonic hg19 LUAD TCGA-50-5066-02A 2 8 Out-of-frame Inter-chr p32.3 q22.3 61254 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHCR24-EPHX1 DHCR24 chr1 55315306 - EPHX1 chr1 225997794 + Exonic hg19 LIHC TCGA-EP-A3JL-01A 2 1 Out-of-frame Intra-chr p32.3 q42.12 61255 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHCR24-EPHX1 DHCR24 chr1 55315306 - EPHX1 chr1 225997794 + Exonic hg19 LIHC TCGA-G3-A25Z-01A 2 1 Out-of-frame Intra-chr p32.3 q42.12 61256 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHCR24-EPHX1 DHCR24 chr1 55315306 - EPHX1 chr1 225997794 + Exonic hg19 ACC TCGA-OR-A5JY-01A 2 1 Out-of-frame Intra-chr p32.3 q42.12 61257 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHCR24-EPHX1 DHCR24 chr1 55315306 - EPHX1 chr1 225997794 + Exonic hg19 ACC TCGA-OR-A5K2-01A 2 1 Out-of-frame Intra-chr p32.3 q42.12 61258 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHCR24-EPHX1 DHCR24 chr1 55315306 - EPHX1 chr1 225997794 + Exonic hg19 ACC TCGA-OR-A5LH-01A 2 1 Out-of-frame Intra-chr p32.3 q42.12 61259 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHCR24-FADS2 DHCR24 chr1 55315306 - FADS2 chr11 61588853 + Exonic hg19 ACC TCGA-OR-A5J7-01A 2 1 Out-of-frame Inter-chr p32.3 q12.2 61260 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHCR24-LRP11 DHCR24 chr1 55315306 - LRP11 chr6 150174296 - Exonic hg19 PRAD TCGA-KC-A7FA-01A 2 2 3'UTR-CDS Inter-chr p32.3 q25.1 61261 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHCR24-NDUFV1 DHCR24 chr1 55315306 - NDUFV1 chr11 67375697 + Exonic hg19 LUAD TCGA-78-7542-01A 2 5 Out-of-frame Inter-chr p32.3 q13.2 61262 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHCR24-PCNXL2 DHCR24 chr1 55319710 - PCNXL2 chr1 233314921 - Exonic hg19 HNSC TCGA-CV-7253-01A 219 241 In-Frame Intra-chr p32.3 Seq+ 61263 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHCR24-PRKCSH DHCR24 chr1 55315306 - PRKCSH chr19 11553201 + Exonic hg19 PRAD TCGA-VP-A872-01A 2 102 3'UTR-CDS Inter-chr p32.3 p13.2 61264 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHCR24-SFTPC DHCR24 chr1 55317396 - SFTPC chr8 22019313 + Exonic hg19 LUAD TCGA-38-4626-01A 6 1 Out-of-frame Inter-chr p32.3 p21.3 61265 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHCR24-SFTPC DHCR24 chr1 55317396 - SFTPC chr8 22019313 + Exonic hg19 LUSC TCGA-98-A53C-01A 2 1 Out-of-frame Inter-chr p32.3 p21.3 61266 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHCR24-SIAE DHCR24 chr1 55315300 - SIAE chr11 124543777 - Exonic hg19 LUAD TCGA-55-6543-01A 2 1 3'UTR-5'UTR Inter-chr p32.3 q24.2 61267 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHCR24-THBS1 DHCR24 chr1 55315306 - THBS1 chr15 39873127 + Exonic hg19 HNSC TCGA-CN-4742-01A 2 1 Out-of-frame Inter-chr p32.3 q14 Oncogene Tumor suppressor gene 61268 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHCR24-THBS1 DHCR24 chr1 55315306 - THBS1 chr15 39873127 + Exonic hg19 HNSC TCGA-CV-7255-01A 2 2 Out-of-frame Inter-chr p32.3 q14 Oncogene Tumor suppressor gene 61269 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHCR7-AP000867.1 DHCR7 chr11 71155039 - AP000867.1 chr11 71293203 - Exonic hg19 BRCA TCGA-GM-A2DB-01A 15 10 Out-of-frame Intra-chr q13.4 q13.4 61270 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHRS1-METTL3 DHRS1 chr14 24768163 - METTL3 chr14 21970045 - Exonic hg19 LUSC TCGA-39-5019-01A 8 8 In-Frame Intra-chr q12 q11.2 Seq+ 61271 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHRS12-RASL11A DHRS12 chr13 52373670 - RASL11A chr13 27845621 + Exonic hg19 BLCA TCGA-GC-A3RC-01A 15 15 Out-of-frame Intra-chr q14.3 q12.2 Tumor suppressor gene Seq+ 61272 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHRS2-IL25 DHRS2 chr14 24109104 - IL25 chr14 23844834 + Exonic hg19 BLCA TCGA-E7-A85H-01A 736 555 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 61273 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHRS4-MANBA DHRS4 chr14 24423125 - MANBA chr4 103647840 - Exonic hg19 PRAD TCGA-EJ-7781-01A 4 1 Out-of-frame Inter-chr q11.2 q24 Seq+ 61274 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHRS4-SCFD1 DHRS4 chr14 24423125 - SCFD1 chr14 31103153 + Exonic hg19 BLCA TCGA-FD-A3B3-01A 5 2 In-Frame Intra-chr q11.2 q12 Seq+ 61275 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX15-CCDC149 DHX15 chr4 24550478 - CCDC149 chr4 24839894 - Exonic hg19 STAD TCGA-CG-4449-01A 12 19 In-Frame Intra-chr p15.2 p15.2 Seq+ 61276 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX15-ETV1 DHX15 chr4 24585946 - ETV1 chr7 13975521 - Exonic hg19 PRAD TCGA-G9-6339-01A 30 16 In-Frame Inter-chr p15.2 p21.2 Oncogene Transcription factor Seq+ 61277 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX15-RBPJ DHX15 chr4 24550478 - RBPJ chr4 26387975 + Exonic hg19 HNSC TCGA-CV-7090-01A 13 9 Out-of-frame Intra-chr p15.2 p15.2 Transcription factor Seq+ 61278 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX16-HLA-E DHX16 chr6 30638187 - HLA-E chr6 30460181 + Exonic hg19 LGG TCGA-TM-A7CF-01A 8 9 Out-of-frame Intra-chr 61279 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX16-KIAA1949 DHX16 chr6 30632578 - KIAA1949 chr6 30647166 - Exonic hg19 READ TCGA-AF-2690-01A 2 2 Out-of-frame Intra-chr 61280 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX16-KIAA1949 DHX16 chr6 30638187 - KIAA1949 chr6 30645065 - Exonic hg19 LIHC TCGA-BC-A10T-01A 7 6 Out-of-frame Intra-chr 61281 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX30-LIMD1 DHX30 chr3 47844702 - LIMD1 chr3 45707142 + Exonic hg19 PRAD TCGA-YJ-A8SW-01A 6 9 5'UTR-CDS Intra-chr p21.31 p21.31 Tumor suppressor gene Seq+ 61282 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX30-NT5DC2 DHX30 chr3 47870624 - NT5DC2 chr3 52562327 - Exonic hg19 OV TCGA-25-1326-01A 67 222 In-Frame Intra-chr p21.31 p21.1 Seq+ 61283 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX30-ZDHHC3 DHX30 chr3 47883227 - ZDHHC3 chr3 45000952 - Exonic hg19 PRAD TCGA-J4-A67K-01A 10 9 CDS-5'UTR Intra-chr p21.31 Seq+ 61284 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX34-SAE1 DHX34 chr19 47865950 - SAE1 chr19 47712416 + Exonic hg19 UCEC TCGA-5B-A90C-01A 8 6 In-Frame Intra-chr q13.32 q13.32 Seq+ 61285 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX35-DNTTIP1 DHX35 chr20 37612419 - DNTTIP1 chr20 44439524 + Exonic hg19 BRCA TCGA-AR-A0TW-01A 53 15 In-Frame Intra-chr q11.23 q13.12 Transcription factor Seq+ 61286 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX35-TOX2 DHX35 chr20 37591050 - TOX2 chr20 42602007 + Exonic hg19 SKCM TCGA-FS-A1ZE-06A 8 24 Out-of-frame Intra-chr q11.23 q13.12 Seq+ 61287 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX35-VSTM2L DHX35 chr20 37631511 - VSTM2L chr20 36560037 + Exonic hg19 OV TCGA-13-A5FT-01A 2 6 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 61288 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX40-CEP112 DHX40 chr17 57648024 - CEP112 chr17 64066119 - Exonic hg19 SARC TCGA-DX-AB3A-01A 2 3 In-Frame Intra-chr q23.1 q24.1 Seq+ 61289 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX40-UNC5D DHX40 chr17 57685712 - UNC5D chr8 35563447 + Exonic hg19 LUAD TCGA-78-7147-01A 2 2 3'UTR-CDS Inter-chr q23.1 p12 Tumor suppressor gene Seq+ 61290 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX57-DNAJC5B DHX57 chr2 39102929 - DNAJC5B chr8 66955723 + Exonic hg19 BRCA TCGA-LL-A7SZ-01A 3 8 5'UTR-5'UTR Inter-chr p22.1 q13.1 Seq+ 61291 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX57-SOS1 DHX57 chr2 39033701 - SOS1 chr2 39251278 - Exonic hg19 BRCA TCGA-C8-A12P-01A 2 2 In-Frame Intra-chr p22.1 p22.1 61292 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX58-FAM134C DHX58 chr17 40263314 - FAM134C chr17 40739882 - Exonic hg19 STAD TCGA-BR-8487-01A 3 2 In-Frame Intra-chr q21.2 61293 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX8-FMO5 DHX8 chr17 41561553 - FMO5 chr1 146661828 - Exonic hg19 BLCA TCGA-UY-A9PD-01A 31 19 In-Frame Inter-chr q21.31 q21.1 Seq+ 61294 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX8-GPATCH8 DHX8 chr17 41585888 - GPATCH8 chr17 42552271 - Exonic hg19 LUAD TCGA-55-7911-01A 2 1 In-Frame Intra-chr q21.31 q21.31 61295 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX8-MSI2 DHX8 chr17 41567831 - MSI2 chr17 55674229 + Exonic hg19 PAAD TCGA-HZ-A4BK-01A 5 6 In-Frame Intra-chr q21.31 q22 Seq+ 61296 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX8-MYO18A DHX8 chr17 41561553 - MYO18A chr17 27494039 - Exonic hg19 PRAD TCGA-CH-5768-01A 17 11 CDS-5'UTR Intra-chr q21.31 q11.2 Oncogene Seq+ 61297 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX8-PPY DHX8 chr17 41561553 - PPY chr17 42018582 - Exonic hg19 COAD TCGA-F4-6461-01A 2 3 Out-of-frame Intra-chr q21.31 q21.31 Seq+ 61298 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX8-SPACA3 DHX8 chr17 41561553 - SPACA3 chr17 31323861 + Exonic hg19 SARC TCGA-WK-A8Y0-01A 435 273 In-Frame Intra-chr q21.31 q11.2 Seq+ 61299 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX8-ST6GALNAC2 DHX8 chr17 41573636 - ST6GALNAC2 chr17 74562353 - Exonic hg19 CESC TCGA-VS-A8EJ-01A 3 1 Out-of-frame Intra-chr q21.31 q25.1 61300 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX9-FBXO7 DHX9 chr1 182836178 - FBXO7 chr22 32874968 + Exonic hg19 PRAD TCGA-HC-A631-01A 4 2 Out-of-frame Inter-chr q25.3 q12.3 Seq+ 61301 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX9-PRELID1 DHX9 chr1 182850782 - PRELID1 chr5 176733423 + Exonic hg19 PRAD TCGA-TK-A8OK-01A 6 39 In-Frame Inter-chr q25.3 q35.3 Seq+ 61302 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX9-RASAL2 DHX9 chr1 182808591 - RASAL2 chr1 178359235 + Exonic hg19 PRAD TCGA-G9-7522-01A 5 4 5'UTR-CDS Intra-chr q25.3 q25.2 Tumor suppressor gene Seq+ 61303 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DHX9-ZBTB37 DHX9 chr1 182829319 - ZBTB37 chr1 173839335 + Exonic hg19 SKCM TCGA-EB-A42Z-01A 4 5 5'UTR-5'UTR Intra-chr q25.3 q25.1 Transcription factor Seq+ 61304 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIAPH2-F8 DIAPH2 chrX 96013257 - F8 chrX 154066027 - Exonic hg19 LGG TCGA-HT-7470-01A 7 4 In-Frame Intra-chr q21.33 q28 Seq+ 61305 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIAPH2-MAGEA11 DIAPH2 chrX 95993761 - MAGEA11 chrX 148770498 + Exonic hg19 PRAD TCGA-V1-A9Z7-01A 2 2 CDS-5'UTR Intra-chr q21.33 q28 Seq+ 61306 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIAPH2-NRP2 DIAPH2 chrX 95940189 - NRP2 chr2 206656959 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 16 22 Out-of-frame Inter-chr q21.33 q33.3 Seq+ 61307 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIAPH2-PLAC1 DIAPH2 chrX 96018119 - PLAC1 chrX 133736152 - Exonic hg19 SARC TCGA-DX-A8BZ-01A 3 2 CDS-5'UTR Intra-chr q21.33 q26.3 Seq+ 61308 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIAPH3-TDRD3 DIAPH3 chr13 60667762 - TDRD3 chr13 61141659 + Exonic hg19 BRCA TCGA-AN-A0FY-01A 162 115 In-Frame Intra-chr q21.2 q21.2 Seq+ 61309 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DICER1-CLMN DICER1 chr14 95623567 - CLMN chr14 95663031 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 66 5'UTR-CDS Intra-chr q32.13 Oncogene Tumor suppressor gene q32.13 Seq+ 61310 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DICER1-PAPOLA DICER1 chr14 95569683 - PAPOLA chr14 97008580 + Exonic hg19 LUSC TCGA-77-8148-01A 2 1 Out-of-frame Intra-chr q32.13 Oncogene Tumor suppressor gene q32.2 61311 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DICER1-SAMD4A DICER1 chr14 95596395 - SAMD4A chr14 55034214 + Exonic hg19 OV TCGA-29-A5NZ-01A 2 3 CDS-5'UTR Intra-chr q32.13 Oncogene Tumor suppressor gene q22.2 61312 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIEXF-TRAF3IP3 DIEXF chr1 210004388 - TRAF3IP3 chr1 209946293 + Exonic hg19 BLCA TCGA-K4-A6MB-01A 13 14 Out-of-frame Intra-chr q32.2 q32.2 Seq+ 61313 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIP2A-C16orf46 DIP2A chr21 47904741 - C16orf46 chr16 81087699 - Exonic hg19 BLCA TCGA-FD-A5C0-01A 137 97 Out-of-frame Inter-chr q22.3 q23.2 Seq+ 61314 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIP2A-NRIP1 DIP2A chr21 47929289 - NRIP1 chr21 16340847 - Exonic hg19 HNSC TCGA-D6-A4Z9-01A 6 8 CDS-5'UTR Intra-chr q22.3 q21.1 Seq+ 61315 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIP2A-PRH1 DIP2A chr21 47910632 - PRH1 chr12 11033655 - Exonic hg19 BRCA TCGA-AO-A0J2-01A 7 9 CDS-3'UTR Inter-chr q22.3 Seq+ 61316 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIP2A-PRR4 DIP2A chr21 47910632 - PRR4 chr12 11001006 - Exonic hg19 BRCA TCGA-AO-A0J2-01A 282 117 In-Frame Inter-chr q22.3 Seq+ 61317 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIP2A-THOC2 DIP2A chr21 47879135 - THOC2 chrX 122802165 - Exonic hg19 KIRC TCGA-CJ-5681-01A 15 33 Out-of-frame Inter-chr q22.3 q25 Seq+ 61318 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIP2A-YBEY DIP2A chr21 47954600 - YBEY chr21 47706784 + Exonic hg19 READ TCGA-AH-6549-01A 3 4 CDS-5'UTR Intra-chr q22.3 q22.3 Seq+ 61319 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIP2B-BCAT1 DIP2B chr12 50899023 - BCAT1 chr12 24982831 - Exonic hg19 SKCM TCGA-ER-A193-06A 75 47 Out-of-frame Intra-chr q13.12 p12.1 Seq+ 61320 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIP2B-LARP4 DIP2B chr12 50899023 - LARP4 chr12 50829271 + Exonic hg19 OV TCGA-25-1326-01A 3 4 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 61321 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIP2B-LARP4 DIP2B chr12 50899023 - LARP4 chr12 50848097 + Exonic hg19 LUSC TCGA-66-2800-01A 12 10 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 61322 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIP2B-R3HDM2 DIP2B chr12 51054102 - R3HDM2 chr12 57693261 - Exonic hg19 SARC TCGA-DX-AB2G-01A 3 3 Out-of-frame Intra-chr q13.12 q13.3 61323 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIP2B-RTTN DIP2B chr12 51102345 - RTTN chr18 67795782 - Exonic hg19 LGG TCGA-IK-7675-01A 15 13 Out-of-frame Inter-chr q13.12 q22.2 Seq+ 61324 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIP2B-SPATS2 DIP2B chr12 51108379 - SPATS2 chr12 49919727 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 30 30 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 61325 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIP2B-TAF8 DIP2B chr12 51128913 - TAF8 chr6 42019095 + Exonic hg19 GBM TCGA-06-0129-01A 6 18 In-Frame Inter-chr q13.12 p21.1 Seq+ 61326 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIP2B-TBC1D15 DIP2B chr12 50899023 - TBC1D15 chr12 72315148 + Exonic hg19 SKCM TCGA-BF-A1PU-01A 29 43 Out-of-frame Intra-chr q13.12 q21.1 Seq+ 61327 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIP2B-TMBIM6 DIP2B chr12 50899023 - TMBIM6 chr12 50146247 + Exonic hg19 GBM TCGA-06-1804-01A 4 18 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 61328 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIP2C-INPP5A DIP2C chr10 735434 - INPP5A chr10 134540325 + Exonic hg19 PRAD TCGA-HC-A48F-01A 2 1 Out-of-frame Intra-chr p15.3 q26.3 61329 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIP2C-LARP4B DIP2C chr10 735434 - LARP4B chr10 910210 - Exonic hg19 SKCM TCGA-BF-AAP2-01A 8 5 Out-of-frame Intra-chr p15.3 p15.3 Seq+ 61330 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIP2C-ORC4 DIP2C chr10 735434 - ORC4 chr2 148733544 - Exonic hg19 SARC TCGA-K1-A6RV-01A 3 9 CDS-5'UTR Inter-chr p15.3 q23.1 Seq+ 61331 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIP2C-RTKN2 DIP2C chr10 334304 - RTKN2 chr10 63959620 - Exonic hg19 UCS TCGA-NA-A4QV-01A 16 6 Out-of-frame Intra-chr p15.3 q21.2 Seq+ 61332 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIP2C-TBX18 DIP2C chr10 486811 - TBX18 chr6 85472466 - Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 2 3 In-Frame Inter-chr p15.3 q14.3 Transcription factor Seq+ 61333 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIP2C-TECTA DIP2C chr10 518379 - TECTA chr11 120996011 + Exonic hg19 HNSC TCGA-CV-7177-01A 6 1 Out-of-frame Inter-chr p15.3 q23.3 Seq+ 61334 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIP2C-YY1 DIP2C chr10 735434 - YY1 chr14 100728641 + Exonic hg19 BRCA TCGA-D8-A1JL-01A 6 11 In-Frame Inter-chr p15.3 q32.2 Transcription factor Seq+ 61335 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIP2C-ZMYND11 DIP2C chr10 532399 - ZMYND11 chr10 225934 + Exonic hg19 LUSC TCGA-60-2721-01A 4 1 CDS-5'UTR Intra-chr p15.3 p15.3 Tumor suppressor gene 61336 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIP2C-ZMYND11 DIP2C chr10 735434 - ZMYND11 chr10 225934 + Exonic hg19 UCEC TCGA-EY-A2OQ-01A 2 2 CDS-5'UTR Intra-chr p15.3 p15.3 Tumor suppressor gene 61337 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIRAS2-GNA14 DIRAS2 chr9 93405034 - GNA14 chr9 80049438 - Exonic hg19 BLCA TCGA-DK-A2I1-01A 4 14 5'UTR-CDS Intra-chr q22.2 q21.2 Seq+ 61338 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIRC2-DDT DIRC2 chr3 122525797 - DDT chr22 24313812 - Exonic hg19 PRAD TCGA-EJ-A7NH-01A 20 12 In-Frame Inter-chr q21.1 Seq+ 61339 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIS3L2-ARMC9 DIS3L2 chr2 232894790 - ARMC9 chr2 232160911 + Exonic hg19 BLCA TCGA-K4-A83P-01A 2 1 Out-of-frame Intra-chr q37.1 q37.1 61340 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIS3L2-DNM1 DIS3L2 chr2 233128150 - DNM1 chr9 130996300 + Exonic hg19 PRAD TCGA-G9-A9S7-01A 19 15 Out-of-frame Inter-chr q37.1 q34.11 Seq+ 61341 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIS3L2-FAM124B DIS3L2 chr2 232952431 - FAM124B chr2 225244925 - Exonic hg19 LUSC TCGA-18-3411-01A 13 2 Out-of-frame Intra-chr q37.1 q36.2 61342 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIS3L2-MICU1 DIS3L2 chr2 232826475 - MICU1 chr10 74326552 - Exonic hg19 UCEC TCGA-AJ-A2QM-01A 2 69 5'UTR-5'UTR Inter-chr q37.1 q22.1 Seq+ 61343 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIS3L2-SPHKAP DIS3L2 chr2 233164829 - SPHKAP chr2 228996801 - Exonic hg19 BRCA TCGA-A1-A0SK-01A 14 3 In-Frame Intra-chr q37.1 q36.3 Seq+ 61344 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIS3L2-UBE2E3 DIS3L2 chr2 233164829 - UBE2E3 chr2 181848770 + Exonic hg19 BRCA TCGA-BH-A18U-01A 4 8 In-Frame Intra-chr q37.1 q31.3 Seq+ 61345 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DISC1-LYPLAL1 DISC1 chr1 231837770 - LYPLAL1 chr1 219352489 + Exonic hg19 READ TCGA-AF-4110-01A 3 5 In-Frame Intra-chr q42.2 q41 61346 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DISC1-MDM1 DISC1 chr1 231954263 - MDM1 chr12 68715408 - Exonic hg19 SARC TCGA-DX-A7EI-01A 8 12 Out-of-frame Inter-chr q42.2 q15 Seq+ 61347 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DISP2-PHGR1 DISP2 chr15 40650641 - PHGR1 chr15 40648274 + Exonic hg19 LUSC TCGA-66-2756-01A 8 3 Out-of-frame Intra-chr q15.1 q15.1 Seq+ 61348 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DIXDC1-GAB2 DIXDC1 chr11 111808283 - GAB2 chr11 77991947 - Exonic hg19 BRCA TCGA-A1-A0SO-01A 18 30 In-Frame Intra-chr q23.1 q14.1 Seq+ 61349 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DKK3-PPFIA1 DKK3 chr11 12023847 - PPFIA1 chr11 70194295 + Exonic hg19 UCEC TCGA-AJ-A3TW-01A 2 1 Out-of-frame Intra-chr p15.3 Tumor suppressor gene q13.3 61350 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLD-SCEL DLD chr7 107531734 - SCEL chr13 78171680 + Exonic hg19 PRAD TCGA-VN-A88L-01A 51 24 Out-of-frame Inter-chr q31.1 q22.3 Seq+ 61351 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLD-SHPRH DLD chr7 107542838 - SHPRH chr6 146185627 - Exonic hg19 SARC TCGA-DX-A6BH-01A 15 7 Out-of-frame Inter-chr q31.1 q24.3 Tumor suppressor gene Seq+ 61352 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLG1-BBX DLG1 chr3 197023217 - BBX chr3 107364683 + Exonic hg19 COAD TCGA-G4-6297-01A 2 1 CDS-5'UTR Intra-chr q29 Tumor suppressor gene q13.12 Transcription factor 61353 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLG1-BDH1 DLG1 chr3 197009550 - BDH1 chr3 197273357 - Exonic hg19 LUSC TCGA-66-2771-01A 4 6 CDS-5'UTR Intra-chr q29 Tumor suppressor gene Seq+ 61354 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLG1-BDH1 DLG1 chr3 197009550 - BDH1 chr3 197249652 - Exonic hg19 ESCA TCGA-L5-A4OS-01A 13 51 In-Frame Intra-chr q29 Tumor suppressor gene Seq+ 61355 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLG1-BDH1 DLG1 chr3 197023217 - BDH1 chr3 197241287 - Exonic hg19 HNSC TCGA-P3-A5QA-01A 34 36 In-Frame Intra-chr q29 Tumor suppressor gene Seq+ 61356 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLG1-BDH1 DLG1 chr3 196817783 - BDH1 chr3 197239235 - Exonic hg19 CESC TCGA-VS-A959-01A 6 2 Out-of-frame Intra-chr q29 Tumor suppressor gene Seq+ 61357 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLG1-CBFA2T2 DLG1 chr3 197009550 - CBFA2T2 chr20 32232153 + Exonic hg19 SARC TCGA-DX-A8BS-01A 28 32 In-Frame Inter-chr q29 Tumor suppressor gene q11.21 Seq+ 61358 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLG1-CRYBG3 DLG1 chr3 196921296 - CRYBG3 chr3 97631011 + Exonic hg19 PRAD TCGA-KK-A59X-01A 9 11 Out-of-frame Intra-chr q29 Tumor suppressor gene q11.2 Seq+ 61359 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLG1-FAIM DLG1 chr3 196921296 - FAIM chr3 138340249 + Exonic hg19 SARC TCGA-DX-A8BH-01A 22 7 Out-of-frame Intra-chr q29 Tumor suppressor gene q22.3 Seq+ 61360 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLG1-MUSK DLG1 chr3 197009550 - MUSK chr9 113457683 + Exonic hg19 STAD TCGA-VQ-A91Q-01A 2 61 Out-of-frame Inter-chr q29 Tumor suppressor gene q31.3 TK:Musk Seq+ 61361 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLG1-MYO9B DLG1 chr3 196921296 - MYO9B chr19 17301906 + Exonic hg19 BLCA TCGA-FD-A6TG-01A 18 10 In-Frame Inter-chr q29 Tumor suppressor gene p13.11 Seq+ 61362 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLG1-PAK2 DLG1 chr3 197009550 - PAK2 chr3 196534653 + Exonic hg19 OV TCGA-25-1328-01A 2 24 In-Frame Intra-chr q29 Tumor suppressor gene q29 STE:STE20 Seq+ 61363 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLG1-PCSK5 DLG1 chr3 196921296 - PCSK5 chr9 78936338 + Exonic hg19 STAD TCGA-BR-8060-01A 7 33 Out-of-frame Inter-chr q29 Tumor suppressor gene q21.13 Seq+ 61364 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLG1-TMEM44 DLG1 chr3 197009550 - TMEM44 chr3 194344424 - Exonic hg19 HNSC TCGA-BA-A6DB-01A 2 1 Out-of-frame Intra-chr q29 Tumor suppressor gene q29 Seq+ 61365 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLG1-WDR60 DLG1 chr3 196807922 - WDR60 chr7 158711431 + Exonic hg19 SARC TCGA-DX-AATS-01A 12 5 In-Frame Inter-chr q29 Tumor suppressor gene q36.3 Seq+ 61366 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLG2-CARD17 DLG2 chr11 83252725 - CARD17 chr11 104970148 - Exonic hg19 PRAD TCGA-YL-A8S8-01A 5 6 Out-of-frame Intra-chr q14.1 q22.3 Seq+ 61367 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLG2-XRCC6BP1 DLG2 chr11 83874504 - XRCC6BP1 chr12 58339411 + Exonic hg19 SARC TCGA-DX-AB2H-01A 15 13 Out-of-frame Inter-chr q14.1 61368 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLG3-UNC5D DLG3 chrX 69699114 - UNC5D chr8 35606045 + Exonic hg19 UCEC TCGA-BK-A139-01A 20 35 In-Frame Inter-chr q13.1 p12 Tumor suppressor gene Seq+ 61369 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLG3-UNC5D DLG3 chrX 69699114 - UNC5D chr8 35606045 + Exonic hg19 UCEC TCGA-BK-A139-02A 5 4 In-Frame Inter-chr q13.1 p12 Tumor suppressor gene Seq+ 61370 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLG4-BBS2 DLG4 chr17 7106222 - BBS2 chr16 56548592 - Exonic hg19 SKCM TCGA-EE-A3AE-06A 2 1 Out-of-frame Inter-chr p13.1 Tumor suppressor gene q13 61371 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLG4-GAS7 DLG4 chr17 7120437 - GAS7 chr17 9885201 - Exonic hg19 ESCA TCGA-JY-A6FE-01A 3 1 Out-of-frame Intra-chr p13.1 Tumor suppressor gene p13.1 61372 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLG4-KRT8 DLG4 chr17 7120437 - KRT8 chr12 53298811 - Exonic hg19 SARC TCGA-KD-A5QU-01A 34 28 Out-of-frame Inter-chr p13.1 Tumor suppressor gene q13.13 Seq+ 61373 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLG4-MARCH10 DLG4 chr17 7120437 - 2019_ 3_ 10_ chr17 60879113 - Exonic hg19 KIRC TCGA-BP-4983-01A 85 42 Out-of-frame Intra-chr p13.1 Tumor suppressor gene q23.2 Seq+ 61374 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLG5-PCDH15 DLG5 chr10 79685975 - PCDH15 chr10 56287637 - Exonic hg19 BRCA TCGA-E9-A229-01A 11 7 In-Frame Intra-chr q22.3 q21.1 Seq+ 61375 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLG5-POLR3A DLG5 chr10 79685975 - POLR3A chr10 79750925 - Exonic hg19 LUSC TCGA-85-7697-01A 2 2 Out-of-frame Intra-chr q22.3 q22.3 61376 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLG5-RET DLG5 chr10 79588640 - RET chr10 43612032 + Exonic hg19 THCA TCGA-DE-A69K-01A 154 90 In-Frame Intra-chr q22.3 q11.21 TK:Ret Oncogene Seq+ 61377 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLGAP1-ENOSF1 DLGAP1 chr18 3534192 - ENOSF1 chr18 675402 - Exonic hg19 LUAD TCGA-38-4632-01A 3 1 Out-of-frame Intra-chr p11.31 p11.32 Seq+ 61378 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLGAP1-METTL4 DLGAP1 chr18 3814059 - METTL4 chr18 2567653 - Exonic hg19 SARC TCGA-DX-A1KU-01A 7 4 CDS-5'UTR Intra-chr p11.31 p11.32 Seq+ 61379 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLGAP1-RAB31 DLGAP1 chr18 3814059 - RAB31 chr18 9792151 + Exonic hg19 BRCA TCGA-D8-A147-01A 2 4 In-Frame Intra-chr p11.31 p11.22 Seq+ 61380 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLGAP1-XRCC6BP1 DLGAP1 chr18 3729135 - XRCC6BP1 chr12 58350470 + Exonic hg19 PRAD TCGA-J4-A67L-01A 3 4 Out-of-frame Inter-chr p11.31 61381 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLGAP4-BPI DLGAP4 chr20 35129014 - BPI chr20 36917429 + Exonic hg19 LUAD TCGA-44-A47B-01A 12 6 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 61382 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLGAP4-RGMA DLGAP4 chr20 35091002 - RGMA chr15 93595737 - Exonic hg19 UCEC TCGA-A5-A7WK-01A 19 11 In-Frame Inter-chr q11.23 q26.1 Seq+ 61383 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLGAP4-TP53TG5 DLGAP4 chr20 35091002 - TP53TG5 chr20 44006253 - Exonic hg19 UCS TCGA-N8-A4PN-01A 101 55 Out-of-frame Intra-chr q11.23 q13.12 Seq+ 61384 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLGAP4-TUBD1 DLGAP4 chr20 35091002 - TUBD1 chr17 57941208 - Exonic hg19 BRCA TCGA-AC-A62V-01A 2 3 In-Frame Inter-chr q11.23 q23.1 Seq+ 61385 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLGAP5-L2HGDH DLGAP5 chr14 55658181 - L2HGDH chr14 50713971 - Exonic hg19 BRCA TCGA-A8-A09R-01A 2 5 5'UTR-CDS Intra-chr q22.3 q21.3 Seq+ 61386 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLK1-AC011333.1 DLK1 chr14 101201464 - AC011333.1 chr5 173473096 + Exonic hg19 PCPG TCGA-WB-A81T-01A 2 6 Out-of-frame Inter-chr q32.2 Tumor suppressor gene q35.2 61387 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLK1-CCT5 DLK1 chr14 101201464 - CCT5 chr5 10250033 + Exonic hg19 UCS TCGA-NG-A4VU-01A 2 4 Out-of-frame Inter-chr q32.2 Tumor suppressor gene p15.2 61388 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLK1-STAT6 DLK1 chr14 101201464 - STAT6 chr12 57496773 - Exonic hg19 ACC TCGA-OR-A5JM-01A 3 2 Out-of-frame Inter-chr q32.2 Tumor suppressor gene q13.3 Transcription factor 61389 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLK1-STAT6 DLK1 chr14 101201464 - STAT6 chr12 57496773 - Exonic hg19 ACC TCGA-OR-A5LM-01A 2 4 Out-of-frame Inter-chr q32.2 Tumor suppressor gene q13.3 Transcription factor 61390 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLK1-THSD4 DLK1 chr14 101201464 - THSD4 chr15 72072881 + Exonic hg19 ACC TCGA-OR-A5J2-01A 2 6 Out-of-frame Inter-chr q32.2 Tumor suppressor gene q23 61391 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DLST-YLPM1 DLST chr14 75361112 - YLPM1 chr14 75264283 + Exonic hg19 ACC TCGA-OR-A5KX-01A 2 2 In-Frame Intra-chr q24.3 q24.3 Seq+ 61392 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DMBT1-ARMS2 DMBT1 chr10 124380896 - ARMS2 chr10 124216423 + Exonic hg19 ESCA TCGA-Q9-A6FW-01A 12 27 Out-of-frame Intra-chr q26.13 Tumor suppressor gene q26.13 Seq+ 61393 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DMC1-DNAL4 DMC1 chr22 38962595 - DNAL4 chr22 39177014 - Exonic hg19 BRCA TCGA-BH-A0BC-01A 5 4 In-Frame Intra-chr q13.1 q13.1 Seq+ 61394 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DMD-LIX1L DMD chrX 31279072 - LIX1L chr1 145487304 + Exonic hg19 SARC TCGA-DX-A1KY-01A 5 8 In-Frame Inter-chr p21.1 Tumor suppressor gene q21.1 Seq+ 61395 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DMD-TMEM117 DMD chrX 32536125 - TMEM117 chr12 44605073 + Exonic hg19 SARC TCGA-DX-A240-01A 2 2 In-Frame Inter-chr p21.1 Tumor suppressor gene q12 Seq+ 61396 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DMGDH-NMNAT2 DMGDH chr5 78301096 - NMNAT2 chr1 183230438 - Exonic hg19 KIRC TCGA-CW-5589-01A 30 21 In-Frame Inter-chr q14.1 q25.3 Seq+ 61397 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DMPK-RCN3 DMPK chr19 46282522 - RCN3 chr19 50037450 + Exonic hg19 UCEC TCGA-PG-A914-01A 5 3 Out-of-frame Intra-chr q13.32 q13.33 Seq+ 61398 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DMTF1-GRM3 DMTF1 chr7 86794366 - GRM3 chr7 86415577 + Exonic hg19 LUSC TCGA-22-4594-01A 3 1 Out-of-frame Intra-chr q21.12 Tumor suppressor gene Transcription factor q21.11 61399 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DMTF1-SEMA3D DMTF1 chr7 86800405 - SEMA3D chr7 84702397 - Exonic hg19 LGG TCGA-FG-5963-01A 12 12 In-Frame Intra-chr q21.12 Tumor suppressor gene Transcription factor q21.11 Seq+ 61400 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DMTF1-SEMA3D DMTF1 chr7 86800405 - SEMA3D chr7 84702397 - Exonic hg19 LGG TCGA-FG-5963-02A 23 8 In-Frame Intra-chr q21.12 Tumor suppressor gene Transcription factor q21.11 Seq+ 61401 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DMWD-KDM4C DMWD chr19 46294163 - KDM4C chr9 7128066 + Exonic hg19 PRAD TCGA-V1-A9O5-06A 58 36 In-Frame Inter-chr q13.32 p24.1 Seq+ 61402 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DMXL1-ARHGAP15 DMXL1 chr5 118407351 - ARHGAP15 chr2 144193170 + Exonic hg19 BLCA TCGA-G2-AA3F-01A 22 8 In-Frame Inter-chr q23.1 q22.2 Seq+ 61403 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DMXL1-NANS DMXL1 chr5 118407351 - NANS chr9 100843098 + Exonic hg19 SARC TCGA-DX-A1KZ-01A 16 6 In-Frame Inter-chr q23.1 q22.33 Seq+ 61404 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAH1-ALAS1 DNAH1 chr3 52350561 - ALAS1 chr3 52245299 + Exonic hg19 BRCA TCGA-OL-A5D7-01A 8 7 5'UTR-CDS Intra-chr p21.1 p21.2 Seq+ 61405 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAH1-CACNA1D DNAH1 chr3 52418047 - CACNA1D chr3 53834276 + Exonic hg19 STAD TCGA-D7-A74A-01A 2 2 In-Frame Intra-chr p21.1 p21.1 61406 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAH10-LIN7A DNAH10 chr12 124323236 - LIN7A chr12 81239718 - Exonic hg19 SARC TCGA-3B-A9HO-01A 42 30 In-Frame Intra-chr q21.31 Seq+ 61407 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAH14-ARF1 DNAH14 chr1 225117537 - ARF1 chr1 228284779 + Exonic hg19 SKCM TCGA-YD-A89C-06A 314 94 5'UTR-5'UTR Intra-chr q42.12 q42.13 Tumor suppressor gene Seq+ 61408 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAH7-ZCWPW2 DNAH7 chr2 196933421 - ZCWPW2 chr3 28520305 + Exonic hg19 COAD TCGA-CM-5868-01A 3 3 In-Frame Inter-chr q32.3 p24.1 61409 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAH8-TMEM217 DNAH8 chr6 38919296 - TMEM217 chr6 37180772 - Exonic hg19 GBM TCGA-06-0129-01A 24 52 CDS-3'UTR Intra-chr p21.2 p21.2 Seq+ 61410 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJA1-GALNTL6 DNAJA1 chr9 33030665 - GALNTL6 chr4 173930329 + Exonic hg19 LGG TCGA-HT-7477-01B 2 2 Out-of-frame Inter-chr p21.1 q34.1 Seq+ 61411 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJA2-LPCAT2 DNAJA2 chr16 46992915 - LPCAT2 chr16 55562289 + Exonic hg19 COAD TCGA-CM-4743-01A 2 3 Out-of-frame Intra-chr q11.2 q12.2 Seq+ 61412 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJA3-ZDHHC16 DNAJA3 chr16 4498849 - ZDHHC16 chr10 99211428 + Exonic hg19 UCEC TCGA-B5-A0JN-01A 5 4 CDS-5'UTR Inter-chr Tumor suppressor gene q24.1 Seq+ 61413 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJB12-CTNNA3 DNAJB12 chr10 74114523 - CTNNA3 chr10 68979628 - Exonic hg19 BRCA TCGA-S3-AA17-01A 6 4 Out-of-frame Intra-chr q22.1 q21.3 Tumor suppressor gene Seq+ 61414 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJB12-SLC25A16 DNAJB12 chr10 74114523 - SLC25A16 chr10 70266475 - Exonic hg19 BRCA TCGA-AO-A03V-01A 80 55 In-Frame Intra-chr q22.1 q21.3 Seq+ 61415 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC1-DCLRE1C DNAJC1 chr10 22171211 - DCLRE1C chr10 14941311 - Exonic hg19 BRCA TCGA-A8-A081-01A 201 219 CDS-3'UTR Intra-chr p12.31 p13 Seq+ 61416 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC1-PLEKHF2 DNAJC1 chr10 22171211 - PLEKHF2 chr8 96166259 + Exonic hg19 BRCA TCGA-B6-A0IH-01A 2 5 CDS-5'UTR Inter-chr p12.31 q22.1 Seq+ 61417 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC11-KRT13 DNAJC11 chr1 6695551 - KRT13 chr17 39661849 - Exonic hg19 BLCA TCGA-DK-A3X2-01A 2 1 Out-of-frame Inter-chr p36.31 Tumor suppressor gene q21.2 61418 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC14-SMARCC2 DNAJC14 chr12 56216854 - SMARCC2 chr12 56568548 - Exonic hg19 STAD TCGA-BR-8060-01A 24 53 In-Frame Intra-chr q13.2 q13.2 Seq+ 61419 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC17-CIB2 DNAJC17 chr15 41099567 - CIB2 chr15 78416081 - Exonic hg19 LUAD TCGA-55-1592-01A 38 7 In-Frame Intra-chr q15.1 q25.1 Seq+ 61420 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC17-INO80 DNAJC17 chr15 41099567 - INO80 chr15 41277624 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 8 1 Out-of-frame Intra-chr q15.1 q15.1 Seq+ 61421 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC17-PPP1R14D DNAJC17 chr15 41099567 - PPP1R14D chr15 41109545 - Exonic hg19 LUAD TCGA-55-6986-01A 19 2 In-Frame Intra-chr q15.1 q15.1 Seq+ 61422 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC17-PPP1R14D DNAJC17 chr15 41099567 - PPP1R14D chr15 41108451 - Exonic hg19 UCEC TCGA-KP-A3W0-01A 28 13 In-Frame Intra-chr q15.1 q15.1 Seq+ 61423 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC17-TRIP4 DNAJC17 chr15 41099567 - TRIP4 chr15 64747196 + Exonic hg19 SARC TCGA-FX-A3TO-01A 63 28 Out-of-frame Intra-chr q15.1 q22.31 Seq+ 61424 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC19-ADK DNAJC19 chr3 180705811 - ADK chr10 76285014 + Exonic hg19 HNSC TCGA-CV-7103-01A 39 48 In-Frame Inter-chr q26.33 q22.2 Seq+ 61425 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC2-CDK14 DNAJC2 chr7 102985006 - CDK14 chr7 90492490 + Exonic hg19 LUSC TCGA-85-8351-01A 2 2 In-Frame Intra-chr q22.1 q21.13 61426 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC2-PSMC2 DNAJC2 chr7 102978183 - PSMC2 chr7 102996141 + Exonic hg19 OV TCGA-25-1326-01A 3 12 In-Frame Intra-chr q22.1 q22.1 Seq+ 61427 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC2-RELN DNAJC2 chr7 102953394 - RELN chr7 103124297 - Exonic hg19 LIHC TCGA-NI-A8LF-01A 2 1 Out-of-frame Intra-chr q22.1 q22.1 61428 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC2-SLC26A5 DNAJC2 chr7 102978183 - SLC26A5 chr7 103029561 - Exonic hg19 LUSC TCGA-21-1080-01A 56 51 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 61429 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC21-SGCZ DNAJC21 chr5 34930021 - SGCZ chr8 14181713 - Exonic hg19 ACC TCGA-OR-A5KX-01A 2 2 Out-of-frame Inter-chr p13.2 p22 Seq+ 61430 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC22-NTN4 DNAJC22 chr12 49741334 - NTN4 chr12 96131922 - Exonic hg19 BRCA TCGA-AR-A1AV-01A 6 3 5'UTR-CDS Intra-chr q13.12 q22 61431 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC28-GART DNAJC28 chr21 34863909 - GART chr21 34878411 - Exonic hg19 UCS TCGA-N8-A56S-01A 11 9 5'UTR-CDS Intra-chr Seq+ 61432 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC3-CLDN10 DNAJC3 chr13 96329591 - CLDN10 chr13 96212386 + Exonic hg19 LUAD TCGA-44-4112-01A 9 8 In-Frame Intra-chr q32.1 q32.1 Seq+ 61433 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC3-CLDN10 DNAJC3 chr13 96329591 - CLDN10 chr13 96212386 + Exonic hg19 STAD TCGA-BR-8289-01A 4 44 In-Frame Intra-chr q32.1 q32.1 Seq+ 61434 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC3-GPC6 DNAJC3 chr13 96329591 - GPC6 chr13 94679983 + Exonic hg19 BRCA TCGA-GM-A2DF-01A 4 1 Out-of-frame Intra-chr q32.1 q31.3 Seq+ 61435 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC3-MCF2L DNAJC3 chr13 96329591 - MCF2L chr13 113678958 + Exonic hg19 LIHC TCGA-DD-A1EJ-01A 24 15 In-Frame Intra-chr q32.1 q34 Seq+ 61436 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC4-NUDT22 DNAJC4 chr11 64001452 - NUDT22 chr11 63996719 + Exonic hg19 LUAD TCGA-53-A4EZ-01A 5 8 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 61437 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC4-RARRES3 DNAJC4 chr11 63998412 - RARRES3 chr11 63306988 + Exonic hg19 UCS TCGA-N8-A56S-01A 25 25 Out-of-frame Intra-chr q13.1 q12.3 Tumor suppressor gene Seq+ 61438 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC5-TPD52L2 DNAJC5 chr20 62562375 - TPD52L2 chr20 62500649 + Exonic hg19 OV TCGA-24-1428-01A 14 18 In-Frame Intra-chr q13.33 q13.33 Seq+ 61439 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC6-PDE1C DNAJC6 chr1 65855310 - PDE1C chr7 31815346 - Exonic hg19 THCA TCGA-EL-A3H4-01A 2 4 In-Frame Inter-chr p31.3 p14.3 61440 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC7-AC005726.6 DNAJC7 chr17 40169358 - AC005726.6 chr17 26932233 - Exonic hg19 SARC TCGA-DX-A7EM-01A 10 5 Out-of-frame Intra-chr q21.2 q11.2 61441 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC7-SCGB2A2 DNAJC7 chr17 40142282 - SCGB2A2 chr11 62040429 + Exonic hg19 PRAD TCGA-EJ-7325-01B 4 1 Out-of-frame Inter-chr q21.2 q12.3 Seq+ 61442 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC7-TBCD DNAJC7 chr17 40169358 - TBCD chr17 80869634 + Exonic hg19 COAD TCGA-AA-A01Z-01A 93 47 In-Frame Intra-chr q21.2 Seq+ 61443 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC8-C1orf172 DNAJC8 chr1 28559432 - C1orf172 chr1 27278903 - Exonic hg19 HNSC TCGA-DQ-7591-01A 6 4 CDS-5'UTR Intra-chr p35.3 Seq+ 61444 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNAJC8-ZNF3 DNAJC8 chr1 28559432 - ZNF3 chr7 99675056 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 11 21 CDS-5'UTR Inter-chr p35.3 q22.1 Transcription factor Seq+ 61445 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNALI1-ARHGEF6 DNALI1 chr1 38023349 - ARHGEF6 chrX 135790929 - Exonic hg19 LUAD TCGA-71-8520-01A 3 1 In-Frame Inter-chr p34.3 q26.3 Seq+ 61446 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNASE2-TRMT1 DNASE2 chr19 12989196 - TRMT1 chr19 13216210 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 66 38 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 61447 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNER-TRIP12 DNER chr2 230411663 - TRIP12 chr2 230650571 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 3 3 In-Frame Intra-chr q36.3 q36.3 Seq+ 61448 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM1-LCN2 DNM1 chr9 130965910 - LCN2 chr9 130913917 + Exonic hg19 HNSC TCGA-CN-4723-01A 78 51 In-Frame Intra-chr q34.11 q34.11 Seq+ 61449 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM1L-BICD1 DNM1L chr12 32832399 - BICD1 chr12 32487450 + Exonic hg19 SKCM TCGA-ER-A19E-06A 14 8 In-Frame Intra-chr p11.21 p11.21 Seq+ 61450 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM1L-CAP2 DNM1L chr12 32832399 - CAP2 chr6 17463227 + Exonic hg19 LGG TCGA-S9-A6U8-01A 3 1 In-Frame Inter-chr p11.21 p22.3 61451 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM1L-ITPR2 DNM1L chr12 32832399 - ITPR2 chr12 26589279 - Exonic hg19 LUAD TCGA-55-6986-01A 9 3 Out-of-frame Intra-chr p11.21 p11.23 Seq+ 61452 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM1L-TSPAN11 DNM1L chr12 32832399 - TSPAN11 chr12 31106915 + Exonic hg19 COAD TCGA-D5-6929-01A 9 1 CDS-5'UTR Intra-chr p11.21 p11.21 Seq+ 61453 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-ANGPTL4 DNM2 chr19 10829079 - ANGPTL4 chr19 8438589 + Exonic hg19 LIHC TCGA-KR-A7K8-01A 18 22 Out-of-frame Intra-chr p13.2 p13.2 Tumor suppressor gene Seq+ 61454 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-ARHGAP25 DNM2 chr19 10829079 - ARHGAP25 chr2 69002353 + Exonic hg19 BLCA TCGA-ZF-AA51-01A 2 2 Out-of-frame Inter-chr p13.2 p13.3 61455 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-ARHGEF7 DNM2 chr19 10930765 - ARHGEF7 chr13 111953095 + Exonic hg19 SARC TCGA-SI-A71O-06A 15 19 Out-of-frame Inter-chr p13.2 q34 61456 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-ATG4D DNM2 chr19 10897382 - ATG4D chr19 10662573 + Exonic hg19 STAD TCGA-BR-7716-01A 8 115 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 61457 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-C19orf66 DNM2 chr19 10829079 - C19orf66 chr19 10197605 + Exonic hg19 SKCM TCGA-WE-A8K1-06A 4 2 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 61458 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-DAND5 DNM2 chr19 10870487 - DAND5 chr19 13084203 + Exonic hg19 STAD TCGA-IN-A6RI-01A 44 132 Out-of-frame Intra-chr p13.2 p13.13 Seq+ 61459 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-FDX1L DNM2 chr19 10829079 - FDX1L chr19 10419226 - Exonic hg19 SKCM TCGA-EB-A550-01A 7 8 Out-of-frame Intra-chr p13.2 Seq+ 61460 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-ILF3 DNM2 chr19 10934575 - ILF3 chr19 10798022 + Exonic hg19 BRCA TCGA-GM-A2DB-01A 5 8 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 61461 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-ILF3 DNM2 chr19 10829079 - ILF3 chr19 10787839 + Exonic hg19 BRCA TCGA-UU-A93S-01A 3 4 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 61462 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-MRPL4 DNM2 chr19 10829079 - MRPL4 chr19 10363073 + Exonic hg19 UCS TCGA-N9-A4PZ-01A 7 8 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 61463 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-NFIX DNM2 chr19 10870487 - NFIX chr19 13135835 + Exonic hg19 STAD TCGA-IN-A6RI-01A 4 21 Out-of-frame Intra-chr p13.2 p13.13 Transcription factor Seq+ 61464 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-PDE4A DNM2 chr19 10829079 - PDE4A chr19 10556894 + Exonic hg19 LGG TCGA-DB-A4XB-01A 12 6 In-Frame Intra-chr p13.2 p13.2 Seq+ 61465 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-PPAN-P2RY11 DNM2 chr19 10913034 - PPAN-P2RY11 chr19 10224309 + Exonic hg19 BRCA TCGA-D8-A1JL-01A 39 6 Out-of-frame Intra-chr p13.2 p13.2 61466 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-PTH2R DNM2 chr19 10829079 - PTH2R chr2 209292926 + Exonic hg19 SARC TCGA-FX-A3NK-01A 4 10 Out-of-frame Inter-chr p13.2 q34 Seq+ 61467 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-QTRT1 DNM2 chr19 10829079 - QTRT1 chr19 10812626 + Exonic hg19 UCEC TCGA-D1-A3DG-01A 80 44 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 61468 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-QTRT1 DNM2 chr19 10829079 - QTRT1 chr19 10817978 + Exonic hg19 ACC TCGA-OR-A5K5-01A 48 50 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 61469 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-RELB DNM2 chr19 10829079 - RELB chr19 45537502 + Exonic hg19 LIHC TCGA-ZS-A9CF-01A 39 34 Out-of-frame Intra-chr p13.2 q13.32 Transcription factor Seq+ 61470 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-RELB DNM2 chr19 10829079 - RELB chr19 45537502 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 31 27 Out-of-frame Intra-chr p13.2 q13.32 Transcription factor Seq+ 61471 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-RFX1 DNM2 chr19 10870487 - RFX1 chr19 14088898 - Exonic hg19 STAD TCGA-IN-A6RI-01A 4 18 Out-of-frame Intra-chr p13.2 p13.12 Transcription factor Seq+ 61472 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-RFX2 DNM2 chr19 10916643 - RFX2 chr19 5997224 - Exonic hg19 BLCA TCGA-XF-AAMJ-01A 27 6 Out-of-frame Intra-chr p13.2 p13.3 Transcription factor Seq+ 61473 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-SLC44A2 DNM2 chr19 10893796 - SLC44A2 chr19 10745432 + Exonic hg19 STAD TCGA-BR-8373-01A 9 47 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 61474 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-SLC44A2 DNM2 chr19 10870487 - SLC44A2 chr19 10736929 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 4 6 In-Frame Intra-chr p13.2 p13.2 Seq+ 61475 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-SLC44A2 DNM2 chr19 10930765 - SLC44A2 chr19 10736929 + Exonic hg19 LIHC TCGA-GJ-A6C0-01A 6 3 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 61476 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-SLC44A2 DNM2 chr19 10886582 - SLC44A2 chr19 10736929 + Exonic hg19 BRCA TCGA-OL-A5D6-01A 12 13 In-Frame Intra-chr p13.2 p13.2 Seq+ 61477 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-SLC47A1 DNM2 chr19 10942573 - SLC47A1 chr17 19482057 + Exonic hg19 ACC TCGA-OR-A5J9-01A 2 2 Out-of-frame Inter-chr p13.2 p11.2 61478 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-TGIF1 DNM2 chr19 10870487 - TGIF1 chr18 3418141 + Exonic hg19 BRCA TCGA-UU-A93S-01A 5 8 CDS-5'UTR Inter-chr p13.2 p11.31 Transcription factor Seq+ 61479 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM2-ZGLP1 DNM2 chr19 10942579 - ZGLP1 chr19 10420556 - Exonic hg19 SKCM TCGA-EB-A550-01A 11 1 Out-of-frame Intra-chr p13.2 p13.2 Transcription factor Seq+ 61480 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM3-CD247 DNM3 chr1 172100428 - CD247 chr1 167410004 - Exonic hg19 SARC TCGA-DX-A6BG-01A 59 30 Out-of-frame Intra-chr q24.3 q24.2 Seq+ 61481 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM3-SHISA9 DNM3 chr1 172222822 - SHISA9 chr16 13328887 + Exonic hg19 SARC TCGA-DX-A6BH-01A 12 7 Out-of-frame Inter-chr q24.3 p13.12 Seq+ 61482 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM3-TPH2 DNM3 chr1 172222822 - TPH2 chr12 72388219 + Exonic hg19 SARC TCGA-DX-A3U6-01A 22 15 In-Frame Inter-chr q24.3 q21.1 Seq+ 61483 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNM3-UHRF1 DNM3 chr1 171890961 - UHRF1 chr19 4941540 + Exonic hg19 SARC TCGA-DX-A1L3-01A 3 3 Out-of-frame Inter-chr q24.3 p13.3 Seq+ 61484 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNMBP-CPN1 DNMBP chr10 101714971 - CPN1 chr10 101816909 - Exonic hg19 SKCM TCGA-W3-AA1W-06A 13 6 In-Frame Intra-chr q24.2 q24.2 Seq+ 61485 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNMBP-KIAA0494 DNMBP chr10 101648582 - KIAA0494 chr1 47144308 - Exonic hg19 BLCA TCGA-KQ-A41P-01A 3 1 Out-of-frame Inter-chr q24.2 61486 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNMBP-RFWD2 DNMBP chr10 101769595 - RFWD2 chr1 176104222 - Exonic hg19 SARC TCGA-DX-AB2Q-01A 12 7 5'UTR-CDS Inter-chr q24.2 q25.2 Tumor suppressor gene Seq+ 61487 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNMBP-TPTE2 DNMBP chr10 101769595 - TPTE2 chr13 20012293 - Exonic hg19 LUSC TCGA-60-2720-01A 2 2 5'UTR-CDS Inter-chr q24.2 q12.11 Tumor suppressor gene Seq+ 61488 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNMT1-AP1M1 DNMT1 chr19 10254442 - AP1M1 chr19 16344304 + Exonic hg19 LUAD TCGA-05-4426-01A 4 5 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene Transcription factor p13.11 Seq+ 61489 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNMT1-EMR1 DNMT1 chr19 10266529 - EMR1 chr19 6890492 + Exonic hg19 BLCA TCGA-FJ-A3ZE-01A 2 4 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene Transcription factor 61490 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNMT1-FDX1L DNMT1 chr19 10283766 - FDX1L chr19 10421616 - Exonic hg19 LIHC TCGA-DD-A3A5-01A 3 1 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene Transcription factor 61491 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNMT1-FDX1L DNMT1 chr19 10283766 - FDX1L chr19 10426435 - Exonic hg19 UVM TCGA-V4-A9EX-01A 4 1 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene Transcription factor 61492 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNMT1-ICAM3 DNMT1 chr19 10283766 - ICAM3 chr19 10446652 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 4 2 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene Transcription factor p13.2 Seq+ 61493 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNMT1-RAVER1 DNMT1 chr19 10254442 - RAVER1 chr19 10441202 - Exonic hg19 LUAD TCGA-69-7979-01A 4 9 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene Transcription factor p13.2 Seq+ 61494 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNMT3A-DTNB DNMT3A chr2 25564695 - DTNB chr2 25602192 - Exonic hg19 SKCM TCGA-D3-A3C7-06A 13 40 5'UTR-CDS Intra-chr p23.3 Oncogene Tumor suppressor gene p23.3 Seq+ 61495 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNMT3A-GTF3C2 DNMT3A chr2 25458576 - GTF3C2 chr2 27566445 - Exonic hg19 KIRP TCGA-G7-6792-01A 3 2 CDS-5'UTR Intra-chr p23.3 Oncogene Tumor suppressor gene p23.3 Seq+ 61496 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNMT3A-HADHA DNMT3A chr2 25475063 - HADHA chr2 26438044 - Exonic hg19 LIHC TCGA-EP-A2KA-01A 4 3 In-Frame Intra-chr p23.3 Oncogene Tumor suppressor gene p23.3 Seq+ 61497 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNMT3B-COMMD7 DNMT3B chr20 31369220 - COMMD7 chr20 31315949 - Exonic hg19 UCS TCGA-NA-A5I1-01A 29 11 In-Frame Intra-chr q11.21 Tumor suppressor gene q11.21 Seq+ 61498 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNMT3B-DUSP15 DNMT3B chr20 31376818 - DUSP15 chr20 30457400 - Exonic hg19 BLCA TCGA-K4-A3WS-01A 12 2 In-Frame Intra-chr q11.21 Tumor suppressor gene q11.21 Seq+ 61499 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNMT3B-MDM4 DNMT3B chr20 31390276 - MDM4 chr1 204494612 + Exonic hg19 LAML TCGA-AB-2904-03A 7 16 CDS-5'UTR Inter-chr q11.21 Tumor suppressor gene q32.1 Oncogene Seq+ 61500 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNMT3B-MMP9 DNMT3B chr20 31350505 - MMP9 chr20 44638505 + Exonic hg19 KIRP TCGA-Y8-A8S1-01A 3 3 5'UTR-CDS Intra-chr q11.21 Tumor suppressor gene q13.12 Seq+ 61501 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNPEP-TNKS DNPEP chr2 220251008 - TNKS chr8 9592375 + Exonic hg19 LUSC TCGA-85-7696-01A 33 16 In-Frame Inter-chr q35 p23.1 Seq+ 61502 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DNTTIP2-GCLM DNTTIP2 chr1 94341824 - GCLM chr1 94367225 - Exonic hg19 BRCA TCGA-D8-A1X9-01A 7 8 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 61503 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK1-AP3M1 DOCK1 chr10 128926028 - AP3M1 chr10 75898140 - Exonic hg19 LIHC TCGA-CC-A7IJ-01A 6 1 CDS-5'UTR Intra-chr q26.2 q22.2 Seq+ 61504 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK1-APBA1 DOCK1 chr10 129055693 - APBA1 chr9 72132195 - Exonic hg19 BRCA TCGA-AR-A2LL-01A 6 2 CDS-5'UTR Inter-chr q26.2 q21.12 Seq+ 61505 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK1-DACT3 DOCK1 chr10 128860040 - DACT3 chr19 47156332 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 77 31 In-Frame Inter-chr q26.2 q13.32 Seq+ 61506 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK1-DPCD DOCK1 chr10 128798571 - DPCD chr10 103347033 + Exonic hg19 GBM TCGA-02-2483-01A 7 16 Out-of-frame Intra-chr q26.2 q24.32 61507 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK1-GANC DOCK1 chr10 128926028 - GANC chr15 42622774 + Exonic hg19 PRAD TCGA-TP-A8TT-01A 5 1 In-Frame Inter-chr q26.2 q15.1 Seq+ 61508 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK1-MGMT DOCK1 chr10 128769049 - MGMT chr10 131506159 + Exonic hg19 BRCA TCGA-AN-A0AS-01A 3 4 Out-of-frame Intra-chr q26.2 q26.3 61509 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK1-PCDH15 DOCK1 chr10 129179632 - PCDH15 chr10 56287637 - Exonic hg19 BRCA TCGA-C8-A1HN-01A 38 24 Out-of-frame Intra-chr q26.2 q21.1 Seq+ 61510 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK1-PPAPDC1A DOCK1 chr10 128796513 - PPAPDC1A chr10 122263330 + Exonic hg19 BRCA TCGA-A2-A04U-01A 37 33 In-Frame Intra-chr q26.2 Seq+ 61511 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK1-RBFOX2 DOCK1 chr10 129160476 - RBFOX2 chr22 36334945 - Exonic hg19 BLCA TCGA-UY-A9PE-01A 3 1 In-Frame Inter-chr q26.2 61512 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK1-STK32C DOCK1 chr10 128594132 - STK32C chr10 134059459 - Exonic hg19 SARC TCGA-DX-A8BT-01A 63 39 In-Frame Intra-chr q26.2 q26.3 Seq+ 61513 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK10-IL1RN DOCK10 chr2 225796266 - IL1RN chr2 113885266 + Exonic hg19 LGG TCGA-TQ-A7RH-01A 7 7 Out-of-frame Intra-chr q36.2 q14.1 Seq+ 61514 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK3-C3orf54 DOCK3 chr3 50816189 - C3orf54 chr3 49841614 + Exonic hg19 LGG TCGA-TQ-A7RF-01A 3 8 Out-of-frame Intra-chr p21.2 61515 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK3-CSNK1A1 DOCK3 chr3 50816189 - CSNK1A1 chr5 148904734 - Exonic hg19 SARC TCGA-3B-A9HV-01A 7 5 Out-of-frame Inter-chr p21.2 q32 Tumor suppressor gene Seq+ 61516 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK3-SLC9A5 DOCK3 chr3 50879146 - SLC9A5 chr16 67304641 + Exonic hg19 PRAD TCGA-ZG-A9L5-01A 3 1 Out-of-frame Inter-chr p21.2 q22.1 Seq+ 61517 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK3-SMARCC1 DOCK3 chr3 50712731 - SMARCC1 chr3 47663831 - Exonic hg19 LUAD TCGA-38-4630-01A 4 12 Out-of-frame Intra-chr p21.2 p21.31 Tumor suppressor gene Seq+ 61518 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK3-TMIGD2 DOCK3 chr3 50971508 - TMIGD2 chr19 4294813 - Exonic hg19 THYM TCGA-ZB-A96L-01A 15 2 Out-of-frame Inter-chr p21.2 p13.3 Seq+ 61519 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK4-BCAP29 DOCK4 chr7 111846157 - BCAP29 chr7 107224327 + Exonic hg19 KIRP TCGA-B9-4116-01A 8 6 Out-of-frame Intra-chr q31.1 Seq+ 61520 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK4-DUS4L DOCK4 chr7 111846157 - DUS4L chr7 107216811 + Exonic hg19 KIRP TCGA-B9-4116-01A 5 4 Out-of-frame Intra-chr q31.1 61521 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK4-IMMP2L DOCK4 chr7 111846157 - IMMP2L chr7 110603621 - Exonic hg19 KIRP TCGA-5P-A9JZ-01A 34 18 Out-of-frame Intra-chr q31.1 q31.1 KB Pub Seq+ 61522 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK4-IMMP2L DOCK4 chr7 111846157 - IMMP2L chr7 110303777 - Exonic hg19 LUAD TCGA-78-7154-01A 2 2 Out-of-frame Intra-chr q31.1 q31.1 KB Pub Seq+ 61523 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK4-IMMP2L DOCK4 chr7 111846157 - IMMP2L chr7 111127397 - Exonic hg19 PRAD TCGA-ZG-A8QZ-01A 8 8 Out-of-frame Intra-chr q31.1 q31.1 KB Pub Seq+ 61524 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK4-NRCAM DOCK4 chr7 111846157 - NRCAM chr7 107953175 - Exonic hg19 KIRP TCGA-5P-A9JZ-01A 4 1 CDS-5'UTR Intra-chr q31.1 q31.1 Tumor suppressor gene Seq+ 61525 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK4-TPH2 DOCK4 chr7 111846157 - TPH2 chr12 72366299 + Exonic hg19 CESC TCGA-FU-A3TX-01A 6 2 Out-of-frame Inter-chr q31.1 q21.1 Seq+ 61526 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK6-CCDC130 DOCK6 chr19 11339616 - CCDC130 chr19 13862422 + Exonic hg19 LAML TCGA-AB-2941-03A 8 3 CDS-5'UTR Intra-chr p13.2 p13.13 Seq+ 61527 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK6-NFIX DOCK6 chr19 11373073 - NFIX chr19 13183861 + Exonic hg19 ESCA TCGA-2H-A9GG-01A 10 21 Out-of-frame Intra-chr p13.2 p13.13 Transcription factor Seq+ 61528 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK6-TMEM205 DOCK6 chr19 11352721 - TMEM205 chr19 11456304 - Exonic hg19 TGCT TCGA-2G-AAKH-01A 3 9 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 61529 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK7-ADAM32 DOCK7 chr1 63018403 - ADAM32 chr8 39080559 + Exonic hg19 SARC TCGA-SG-A849-01A 7 2 In-Frame Inter-chr p31.3 Seq+ 61530 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK7-INADL DOCK7 chr1 62958375 - INADL chr1 62626580 + Exonic hg19 BRCA TCGA-AR-A24Z-01A 13 5 Out-of-frame Intra-chr p31.3 Seq+ 61531 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK7-NMT2 DOCK7 chr1 63153898 - NMT2 chr10 15183556 - Exonic hg19 SARC TCGA-IF-A4AK-01A 5 4 In-Frame Inter-chr p31.3 p13 Seq+ 61532 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK7-PPP1R12B DOCK7 chr1 62958375 - PPP1R12B chr1 202457661 + Exonic hg19 BRCA TCGA-AR-A24Z-01A 3 2 Out-of-frame Intra-chr p31.3 q32.1 Seq+ 61533 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK8-JAK2 DOCK8 chr9 340321 - JAK2 chr9 5050686 + Exonic hg19 KIRC TCGA-BP-4983-01A 55 21 Out-of-frame Intra-chr p24.3 p24.1 TK:JakA Oncogene Seq+ 61534 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK8-OSBP DOCK8 chr9 390566 - OSBP chr11 59369311 - Exonic hg19 LUAD TCGA-83-5908-01A 27 19 In-Frame Inter-chr p24.3 q12.1 Seq+ 61535 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK9-SPACA7 DOCK9 chr13 99532801 - SPACA7 chr13 113086758 + Exonic hg19 LUAD TCGA-69-7979-01A 99 68 Out-of-frame Intra-chr q32.3 Seq+ 61536 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOCK9-USH2A DOCK9 chr13 99607689 - USH2A chr1 215812580 - Exonic hg19 COAD TCGA-QL-A97D-01A 4 3 Out-of-frame Inter-chr q32.3 q41 Seq+ 61537 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOK5-CLEC17A DOK5 chr20 53260117 - CLEC17A chr19 14717805 + Exonic hg19 OV TCGA-36-1571-01A 3 1 Out-of-frame Inter-chr q13.2 p13.12 Seq+ 61538 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOLPP1-SPTAN1 DOLPP1 chr9 131849077 - SPTAN1 chr9 131379919 + Exonic hg19 BRCA TCGA-AC-A62Y-01A 16 11 In-Frame Intra-chr q34.11 q34.11 Seq+ 61539 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOLPP1-TBC1D13 DOLPP1 chr9 131843486 - TBC1D13 chr9 131559334 + Exonic hg19 BRCA TCGA-EW-A2FR-01A 11 3 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 61540 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOPEY1-RNF144B DOPEY1 chr6 83777498 - RNF144B chr6 18399730 + Exonic hg19 COAD TCGA-AA-3685-01A 3 1 5'UTR-5'UTR Intra-chr q14.1 p22.3 Seq+ 61541 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOPEY2-CBR3 DOPEY2 chr21 37571549 - CBR3 chr21 37510123 + Exonic hg19 LUAD TCGA-05-4420-01A 3 2 Out-of-frame Intra-chr q22.12 q22.12 Seq+ 61542 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOPEY2-CBR3 DOPEY2 chr21 37586854 - CBR3 chr21 37510123 + Exonic hg19 SKCM TCGA-WE-A8K4-01A 14 5 In-Frame Intra-chr q22.12 q22.12 Seq+ 61543 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOPEY2-ELF2 DOPEY2 chr21 37572799 - ELF2 chr4 139983211 - Exonic hg19 PRAD TCGA-EJ-5525-01A 10 6 Out-of-frame Inter-chr q22.12 q31.1 Transcription factor Seq+ 61544 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOPEY2-PIBF1 DOPEY2 chr21 37571549 - PIBF1 chr13 73590007 + Exonic hg19 LUSC TCGA-37-A5EN-01A 9 1 Out-of-frame Inter-chr q22.12 q21.33 61545 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOPEY2-SH3BGR DOPEY2 chr21 37612253 - SH3BGR chr21 40847061 + Exonic hg19 BRCA TCGA-E2-A1B5-01A 6 2 Out-of-frame Intra-chr q22.12 q22.2 Seq+ 61546 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOPEY2-TRPM2 DOPEY2 chr21 37537169 - TRPM2 chr21 45825025 + Exonic hg19 BRCA TCGA-BH-A0EE-01A 18 16 In-Frame Intra-chr q22.12 q22.3 Tumor suppressor gene Seq+ 61547 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOT1L-BTBD2 DOT1L chr19 2223485 - BTBD2 chr19 1997462 - Exonic hg19 COAD TCGA-AA-3511-01A 13 15 In-Frame Intra-chr p13.3 Oncogene Transcription factor p13.3 Seq+ 61548 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOT1L-EPB41L2 DOT1L chr19 2180755 - EPB41L2 chr6 131277639 - Exonic hg19 BRCA TCGA-OL-A66I-01A 13 12 CDS-5'UTR Inter-chr p13.3 Oncogene Transcription factor q23.2 Seq+ 61549 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOT1L-LSM7 DOT1L chr19 2180755 - LSM7 chr19 2328476 - Exonic hg19 PRAD TCGA-V1-A9O9-01A 10 8 Out-of-frame Intra-chr p13.3 Oncogene Transcription factor p13.3 Seq+ 61550 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOT1L-ONECUT3 DOT1L chr19 2207679 - ONECUT3 chr19 1775152 + Exonic hg19 KIRC TCGA-A3-3325-01A 6 5 Out-of-frame Intra-chr p13.3 Oncogene Transcription factor p13.3 Transcription factor Seq+ 61551 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOT1L-PLEKHF1 DOT1L chr19 2164264 - PLEKHF1 chr19 30164731 + Exonic hg19 STAD TCGA-R5-A7ZE-01B 15 35 CDS-5'UTR Intra-chr p13.3 Oncogene Transcription factor q12 Seq+ 61552 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOT1L-PSG11 DOT1L chr19 2164264 - PSG11 chr19 43523200 - Exonic hg19 SARC TCGA-DX-A6B9-01A 21 42 Out-of-frame Intra-chr p13.3 Oncogene Transcription factor q13.31 Seq+ 61553 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOT1L-RP11-362K2.2 DOT1L chr19 2194576 - RP11-362K2.2 chr12 59206196 + Exonic hg19 SARC TCGA-DX-A7ES-01A 103 9 Out-of-frame Inter-chr p13.3 Oncogene Transcription factor 61554 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DOT1L-SSBP3 DOT1L chr19 2164264 - SSBP3 chr1 54694499 - Exonic hg19 SARC TCGA-K1-A3PO-01A 2 5 In-Frame Inter-chr p13.3 Oncogene Transcription factor p32.3 Seq+ 61555 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPF2-CDC42EP2 DPF2 chr11 65101389 - CDC42EP2 chr11 65088015 + Exonic hg19 LUSC TCGA-52-7810-01A 6 15 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 61556 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPF2-POLA2 DPF2 chr11 65113830 - POLA2 chr11 65049950 + Exonic hg19 GBM TCGA-06-0141-01A 6 18 In-Frame Intra-chr q13.1 q13.1 Seq+ 61557 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPF2-PPP1R10 DPF2 chr11 65108016 - PPP1R10 chr6 30577732 - Exonic hg19 SKCM TCGA-W3-A825-06A 17 17 CDS-5'UTR Inter-chr q13.1 Seq+ 61558 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPF2-TRIM49L2 DPF2 chr11 65109033 - TRIM49L2 chr11 89804314 + Exonic hg19 BRCA TCGA-BH-A42T-01A 14 10 Out-of-frame Intra-chr q13.1 61559 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPF3-TDP1 DPF3 chr14 73219972 - TDP1 chr14 90437519 + Exonic hg19 LGG TCGA-P5-A77W-01A 2 4 Out-of-frame Intra-chr q24.2 Transcription factor q32.11 61560 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPH1-RPA1 DPH1 chr17 1933524 - RPA1 chr17 1746097 + Exonic hg19 PCPG TCGA-RW-A681-01A 2 2 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p13.3 Tumor suppressor gene Seq+ 61561 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPM1-CYP4F12 DPM1 chr20 49571723 - CYP4F12 chr19 15807240 + Exonic hg19 OV TCGA-13-0923-01A 16 4 In-Frame Inter-chr q13.13 p13.12 Seq+ 61562 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPM1-EZR DPM1 chr20 49574900 - EZR chr6 159197536 - Exonic hg19 BRCA TCGA-BH-A0B2-01A 21 15 In-Frame Inter-chr q13.13 q25.3 Seq+ 61563 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPM1-GRID1 DPM1 chr20 49571723 - GRID1 chr10 87675996 - Exonic hg19 LAML TCGA-AB-2915-03A 13 9 In-Frame Inter-chr q13.13 q23.2 Seq+ 61564 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPP3-FAM163A DPP3 chr11 66249941 - FAM163A chr1 179776933 + Exonic hg19 SARC TCGA-DX-A7EU-01A 3 4 CDS-5'UTR Inter-chr q13.2 q25.2 Seq+ 61565 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPP3-FKBP2 DPP3 chr11 66272245 - FKBP2 chr11 64011313 + Exonic hg19 LUAD TCGA-97-A4M3-01A 122 63 In-Frame Intra-chr q13.2 q13.1 Seq+ 61566 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPP3-PACS1 DPP3 chr11 66264948 - PACS1 chr11 65998019 + Exonic hg19 BRCA TCGA-A7-A13D-01A 17 13 In-Frame Intra-chr q13.2 q13.1 Seq+ 61567 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPP3-SPATA6 DPP3 chr11 66261104 - SPATA6 chr1 48918803 - Exonic hg19 BLCA TCGA-E7-A85H-01A 2 7 In-Frame Inter-chr q13.2 p33 Seq+ 61568 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPP4-PDK1 DPP4 chr2 162902042 - PDK1 chr2 173451006 + Exonic hg19 KIRP TCGA-Q2-A5QZ-01A 56 51 In-Frame Intra-chr q24.2 Tumor suppressor gene q31.1 AGC:PDK1 Seq+ 61569 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPP4-THSD7B DPP4 chr2 162929909 - THSD7B chr2 137813990 + Exonic hg19 LIHC TCGA-DD-A3A5-01A 3 6 Out-of-frame Intra-chr q24.2 Tumor suppressor gene q22.1 Seq+ 61570 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPP6-GGNBP2 DPP6 chr7 154172122 - GGNBP2 chr17 34937774 + Exonic hg19 PCPG TCGA-WB-A81W-01A 16 24 Out-of-frame Inter-chr Tumor suppressor gene Seq+ 61571 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPP6-IFIT3 DPP6 chr7 154461151 - IFIT3 chr10 91098418 + Exonic hg19 PCPG TCGA-QR-A70V-01A 13 5 Out-of-frame Inter-chr q23.31 61572 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPP8-C15orf42 DPP8 chr15 65790202 - C15orf42 chr15 90135278 + Exonic hg19 BRCA TCGA-D8-A1Y2-01A 4 2 In-Frame Intra-chr q22.31 61573 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPY19L1-CDKAL1 DPY19L1 chr7 35029496 - CDKAL1 chr6 21198252 + Exonic hg19 LUSC TCGA-21-5787-01A 10 11 In-Frame Inter-chr p14.2 p22.3 Seq+ 61574 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPY19L1-NRXN2 DPY19L1 chr7 35050080 - NRXN2 chr11 64387844 - Exonic hg19 BRCA TCGA-A8-A091-01A 2 4 Out-of-frame Inter-chr p14.2 q13.1 Seq+ 61575 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPY19L1-SDK1 DPY19L1 chr7 35050080 - SDK1 chr7 3861082 + Exonic hg19 HNSC TCGA-CV-7437-01A 12 10 In-Frame Intra-chr p14.2 p22.2 Seq+ 61576 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPY19L2-MRPL1 DPY19L2 chr12 64061837 - MRPL1 chr4 78870951 + Exonic hg19 BRCA TCGA-3C-AAAU-01A 4 3 Out-of-frame Inter-chr q14.2 q21.1 Seq+ 61577 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPY19L2-NUP107 DPY19L2 chr12 64059615 - NUP107 chr12 69124890 + Exonic hg19 SARC TCGA-DX-AB35-01A 546 273 Out-of-frame Intra-chr q14.2 q15 Seq+ 61578 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPY19L3-GPR68 DPY19L3 chr19 32930816 - GPR68 chr14 91701523 - Exonic hg19 SKCM TCGA-EB-A4IQ-01A 5 1 CDS-5'UTR Inter-chr q13.11 q32.11 Seq+ 61579 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPY19L4-SDC2 DPY19L4 chr8 95738669 - SDC2 chr8 97605708 + Exonic hg19 STAD TCGA-CG-4304-01A 4 3 Out-of-frame Intra-chr q22.1 q22.1 61580 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPYD-ALKBH3 DPYD chr1 98386440 - ALKBH3 chr11 43923066 + Exonic hg19 UCEC TCGA-AJ-A3BD-01A 4 4 In-Frame Inter-chr p21.3 Oncogene p11.2 Seq+ 61581 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPYD-CSNK1G1 DPYD chr1 98386440 - CSNK1G1 chr15 64551440 - Exonic hg19 OV TCGA-13-1510-01A 4 12 Out-of-frame Inter-chr p21.3 Oncogene q22.31 Seq+ 61582 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPYD-EDIL3 DPYD chr1 97700408 - EDIL3 chr5 83476339 - Exonic hg19 BRCA TCGA-E2-A14Z-01A 3 2 Out-of-frame Inter-chr p21.3 Oncogene q14.3 Seq+ 61583 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPYD-RGS5 DPYD chr1 98348820 - RGS5 chr1 163138158 - Exonic hg19 LIHC TCGA-ED-A97K-01A 7 6 Out-of-frame Intra-chr p21.3 Oncogene q23.3 Seq+ 61584 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPYD-STAB2 DPYD chr1 98348820 - STAB2 chr12 104054109 + Exonic hg19 BRCA TCGA-BH-A1EU-01A 8 3 In-Frame Inter-chr p21.3 Oncogene q23.3 Seq+ 61585 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPYSL2-BNIP3L DPYSL2 chr8 26441499 - BNIP3L chr8 26362823 + Exonic hg19 LUSC TCGA-96-A4JK-01A 13 2 Out-of-frame Intra-chr p21.2 p21.2 Tumor suppressor gene Seq+ 61586 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPYSL2-FSTL5 DPYSL2 chr8 26441499 - FSTL5 chr4 162508727 - Exonic hg19 SARC TCGA-DX-AB2O-01A 16 4 Out-of-frame Inter-chr p21.2 q32.2 Seq+ 61587 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPYSL2-HMBOX1 DPYSL2 chr8 26441499 - HMBOX1 chr8 28837588 + Exonic hg19 SARC TCGA-DX-AB2O-01A 61 40 Out-of-frame Intra-chr p21.2 p21.1 Transcription factor Seq+ 61588 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPYSL2-RP11-360L9.4 DPYSL2 chr8 26492416 - RP11-360L9.4 chr8 41394829 - Exonic hg19 BRCA TCGA-B6-A401-01A 25 27 Out-of-frame Intra-chr p21.2 61589 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPYSL3-ANKS1A DPYSL3 chr5 146770375 - ANKS1A chr6 34977682 + Exonic hg19 BLCA TCGA-FD-A3SR-01A 2 2 Out-of-frame Inter-chr q32 p21.31 61590 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DPYSL3-IL17B DPYSL3 chr5 146889041 - IL17B chr5 148756588 - Exonic hg19 SKCM TCGA-EB-A5KH-06A 9 6 In-Frame Intra-chr q32 q32 Seq+ 61591 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DR1-CCDC18 DR1 chr1 93819628 - CCDC18 chr1 93730258 + Exonic hg19 STAD TCGA-VQ-A91X-01A 3 24 In-Frame Intra-chr p22.1 Transcription factor p22.1 Seq+ 61592 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DRAM1-NTN4 DRAM1 chr12 102271698 - NTN4 chr12 96063922 - Exonic hg19 SARC TCGA-DX-A23V-01A 66 50 Out-of-frame Intra-chr q23.2 q22 Seq+ 61593 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DRAM1-NUP107 DRAM1 chr12 102291708 - NUP107 chr12 69135593 + Exonic hg19 BLCA TCGA-GC-A3RD-01A 224 187 Out-of-frame Intra-chr q23.2 q15 Seq+ 61594 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DRAM1-OVOL2 DRAM1 chr12 102271698 - OVOL2 chr20 18022367 - Exonic hg19 LIHC TCGA-NI-A8LF-01A 2 1 Out-of-frame Inter-chr q23.2 p11.23 Transcription factor 61595 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DRAM1-SYCP3 DRAM1 chr12 102271698 - SYCP3 chr12 102128822 - Exonic hg19 ESCA TCGA-JY-A6FH-01A 10 53 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 61596 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DRAM2-TTF2 DRAM2 chr1 111674046 - TTF2 chr1 117616283 + Exonic hg19 STAD TCGA-CG-4475-01A 7 7 In-Frame Intra-chr p13.3 p13.1 61597 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DRG1-MYO18B DRG1 chr22 31799190 - MYO18B chr22 26317224 + Exonic hg19 LUSC TCGA-33-4532-01A 52 98 In-Frame Intra-chr q12.2 Tumor suppressor gene q12.1 Tumor suppressor gene Seq+ 61598 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DRG2-ZNF624 DRG2 chr17 17997287 - ZNF624 chr17 16527823 - Exonic hg19 BRCA TCGA-EW-A1OZ-01A 3 1 Out-of-frame Intra-chr p11.2 p11.2 Transcription factor Seq+ 61599 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DROSHA-DNAH5 DROSHA chr5 31448654 - DNAH5 chr5 13931353 - Exonic hg19 SKCM TCGA-D3-A3CC-06A 2 1 Out-of-frame Intra-chr p13.3 p15.2 61600 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DROSHA-TERT DROSHA chr5 31421379 - TERT chr5 1282739 - Exonic hg19 SKCM TCGA-FW-A5DX-01A 35 11 Out-of-frame Intra-chr p13.3 p15.33 Oncogene Seq+ 61601 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DROSHA-UGT3A2 DROSHA chr5 31526186 - UGT3A2 chr5 36064452 - Exonic hg19 PRAD TCGA-HC-A9TE-01A 7 7 Out-of-frame Intra-chr p13.3 p13.2 Seq+ 61602 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DSCAML1-KDELC2 DSCAML1 chr11 117647506 - KDELC2 chr11 108345679 - Exonic hg19 LGG TCGA-FG-8191-01A 6 3 Out-of-frame Intra-chr q23.3 q22.3 61603 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DSCAML1-MPZL2 DSCAML1 chr11 117647506 - MPZL2 chr11 118133812 - Exonic hg19 LGG TCGA-HT-8015-01B 3 5 In-Frame Intra-chr q23.3 q23.3 Seq+ 61604 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DSCR3-BACH1 DSCR3 chr21 38639539 - BACH1 chr21 30642678 + Exonic hg19 BRCA TCGA-BH-A1EY-01A 13 6 CDS-5'UTR Intra-chr q22.13 q21.3 Transcription factor Seq+ 61605 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DSCR3-CTSH DSCR3 chr21 38639539 - CTSH chr15 79231513 - Exonic hg19 LIHC TCGA-RC-A6M3-01A 7 5 Out-of-frame Inter-chr q22.13 q25.1 Seq+ 61606 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DSCR3-IGSF5 DSCR3 chr21 38639539 - IGSF5 chr21 41137462 + Exonic hg19 BRCA TCGA-E2-A1LG-01A 4 7 Out-of-frame Intra-chr q22.13 q22.2 Seq+ 61607 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DSCR3-MACROD2 DSCR3 chr21 38639539 - MACROD2 chr20 16021846 + Exonic hg19 BRCA TCGA-C8-A130-01A 10 8 Out-of-frame Inter-chr q22.13 p12.1 Seq+ 61608 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DSCR3-NIPBL DSCR3 chr21 38639539 - NIPBL chr5 37019413 + Exonic hg19 LGG TCGA-DU-6406-01A 12 7 In-Frame Inter-chr q22.13 p13.2 Seq+ 61609 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DSE-GRIN2A DSE chr6 116692284 - GRIN2A chr16 10032408 - Exonic hg19 SARC TCGA-SI-A71O-01A 3 1 5'UTR-CDS Inter-chr q22.1 p13.2 Tumor suppressor gene 61610 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DSE-PLEKHG1 DSE chr6 116720829 - PLEKHG1 chr6 151130241 + Exonic hg19 SARC TCGA-DX-A1KZ-01A 54 12 Out-of-frame Intra-chr q22.1 q25.1 Seq+ 61611 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DSN1-C20orf132 DSN1 chr20 35383166 - C20orf132 chr20 35769717 - Exonic hg19 SARC TCGA-DX-A1L1-01A 5 2 Out-of-frame Intra-chr q11.23 61612 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DSP-HDLBP DSP chr6 7575721 - HDLBP chr2 242170359 - Exonic hg19 COAD TCGA-DM-A0X9-01A 29 13 Out-of-frame Inter-chr p24.3 Tumor suppressor gene q37.3 Seq+ 61613 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DSP-LY86 DSP chr6 7542318 - LY86 chr6 6649858 + Exonic hg19 ESCA TCGA-JY-A6FD-01A 261 1155 Out-of-frame Intra-chr p24.3 Tumor suppressor gene p25.1 Seq+ 61614 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DSP-RCAN2 DSP chr6 7572301 - RCAN2 chr6 46216633 - Exonic hg19 CESC TCGA-DG-A2KL-01A 359 134 In-Frame Intra-chr p24.3 Tumor suppressor gene p12.3 Seq+ 61615 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DSP-UTRN DSP chr6 7586805 - UTRN chr6 144665237 + Exonic hg19 LUAD TCGA-78-7155-01A 2 21 Out-of-frame Intra-chr p24.3 Tumor suppressor gene q24.2 61616 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DST-AKAP6 DST chr6 56464867 - AKAP6 chr14 33147517 + Exonic hg19 LUSC TCGA-56-7822-01A 5 5 In-Frame Inter-chr p12.1 Oncogene q12 Seq+ 61617 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DST-EYS DST chr6 56716195 - EYS chr6 64574251 - Exonic hg19 GBM TCGA-06-0216-01B 4 7 5'UTR-CDS Intra-chr p12.1 Oncogene q12 Seq+ 61618 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DST-EYS DST chr6 56391159 - EYS chr6 66205886 - Exonic hg19 LIHC TCGA-UB-A7MA-01A 4 2 CDS-5'UTR Intra-chr p12.1 Oncogene q12 Seq+ 61619 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DST-FBLN5 DST chr6 56368795 - FBLN5 chr14 92403545 - Exonic hg19 HNSC TCGA-CV-7248-01A 33 26 Out-of-frame Inter-chr p12.1 Oncogene q32.12 Seq+ 61620 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DST-HCST DST chr6 56707853 - HCST chr19 36394253 + Exonic hg19 LUAD TCGA-35-4123-01A 66 36 5'UTR-CDS Inter-chr p12.1 Oncogene q13.12 Seq+ 61621 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DST-KIAA0319L DST chr6 56564451 - KIAA0319L chr1 35900682 - Exonic hg19 BRCA TCGA-AN-A04A-01A 19 7 5'UTR-CDS Inter-chr p12.1 Oncogene p34.3 Seq+ 61622 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DST-MLIP DST chr6 56371241 - MLIP chr6 53986245 + Exonic hg19 SKCM TCGA-DA-A1I0-06A 12 17 In-Frame Intra-chr p12.1 Oncogene p12.1 Seq+ 61623 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DST-TRIM38 DST chr6 56707853 - TRIM38 chr6 25963277 + Exonic hg19 LUSC TCGA-60-2711-01A 12 2 5'UTR-5'UTR Intra-chr p12.1 Oncogene p22.2 Seq+ 61624 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DSTN-ARPC5 DSTN chr20 17550856 - ARPC5 chr1 183599772 - Exonic hg19 LUSC TCGA-52-7812-01A 78 26 In-Frame Inter-chr p12.1 q25.3 Seq+ 61625 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DSTN-C20orf12 DSTN chr20 17550856 - C20orf12 chr20 18436005 - Exonic hg19 LUAD TCGA-55-8206-01A 45 22 Out-of-frame Intra-chr p12.1 61626 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DSTN-CCDC127 DSTN chr20 17550856 - CCDC127 chr5 206073 - Exonic hg19 GBM TCGA-06-2564-01A 4 7 Out-of-frame Inter-chr p12.1 p15.33 Seq+ 61627 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DSTN-DTD1 DSTN chr20 17550856 - DTD1 chr20 18724744 + Exonic hg19 PRAD TCGA-KK-A7AU-01A 29 20 In-Frame Intra-chr p12.1 p11.23 Seq+ 61628 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DSTN-TCFL5 DSTN chr20 17550856 - TCFL5 chr20 61473449 - Exonic hg19 BRCA TCGA-C8-A1HN-01A 10 6 In-Frame Intra-chr p12.1 q13.33 Transcription factor Seq+ 61629 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DSTYK-BRAF DSTYK chr1 205180399 - BRAF chr7 140482957 - Exonic hg19 SKCM TCGA-EB-A97M-01A 27 7 In-Frame Inter-chr q32.1 q34 TKL:RAF Oncogene Seq+ 61630 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DSTYK-CSRP1 DSTYK chr1 205180399 - CSRP1 chr1 201454504 - Exonic hg19 UCS TCGA-N8-A56S-01A 21 15 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 61631 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DSTYK-INTS3 DSTYK chr1 205180399 - INTS3 chr1 153730048 + Exonic hg19 OV TCGA-13-A5FT-01A 2 8 Out-of-frame Intra-chr q32.1 q21.3 Seq+ 61632 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DSTYK-LEMD1 DSTYK chr1 205180399 - LEMD1 chr1 205389702 - Exonic hg19 UCEC TCGA-AX-A2H4-01A 4 4 CDS-5'UTR Intra-chr q32.1 q32.1 Seq+ 61633 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DSTYK-NUCKS1 DSTYK chr1 205180399 - NUCKS1 chr1 205698749 - Exonic hg19 STAD TCGA-BR-8590-01A 10 8 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 61634 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DTD1-KIF16B DTD1 chr20 18608877 - KIF16B chr20 16496309 - Exonic hg19 PRAD TCGA-EJ-8469-01A 3 4 In-Frame Intra-chr p11.23 p12.1 Seq+ 61635 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DTD1-RALGAPA2 DTD1 chr20 18608877 - RALGAPA2 chr20 20527476 - Exonic hg19 HNSC TCGA-CV-5440-01A 4 3 In-Frame Intra-chr p11.23 p11.23 Seq+ 61636 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DTD1-TASP1 DTD1 chr20 18576885 - TASP1 chr20 13246829 - Exonic hg19 LUSC TCGA-33-AAS8-01A 4 6 Out-of-frame Intra-chr p11.23 p12.1 Seq+ 61637 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DTL-AGBL4 DTL chr1 212220759 - AGBL4 chr1 50317190 - Exonic hg19 LUAD TCGA-49-4501-01A 2 3 In-Frame Intra-chr q32.3 p33 Seq+ 61638 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DTL-INTS7 DTL chr1 212220759 - INTS7 chr1 212194554 - Exonic hg19 STAD TCGA-BR-8362-01A 4 15 In-Frame Intra-chr q32.3 q32.3 Seq+ 61639 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DTL-INTS7 DTL chr1 212220759 - INTS7 chr1 212194554 - Exonic hg19 PRAD TCGA-CH-5752-01A 8 3 In-Frame Intra-chr q32.3 q32.3 Seq+ 61640 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DTNA-AQP4 DTNA chr18 32073478 - AQP4 chr18 24442560 - Exonic hg19 LIHC TCGA-FV-A3I0-01A 13 7 5'UTR-CDS Intra-chr q12.1 q11.2 Seq+ 61641 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DTNA-C18orf1 DTNA chr18 32073478 - C18orf1 chr18 13621116 + Exonic hg19 COAD TCGA-D5-6929-01A 4 1 5'UTR-CDS Intra-chr q12.1 61642 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DTNA-CD82 DTNA chr18 32346005 - CD82 chr11 44609025 + Exonic hg19 LGG TCGA-TQ-A7RK-02B 10 5 5'UTR-5'UTR Inter-chr q12.1 p11.2 Tumor suppressor gene Seq+ 61643 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DTNA-ZNF521 DTNA chr18 32346005 - ZNF521 chr18 22902151 - Exonic hg19 BRCA TCGA-E9-A1R6-01A 2 1 In-Frame Intra-chr q12.1 q11.2 Oncogene Transcription factor 61644 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DTNB-ASXL2 DTNB chr2 25818955 - ASXL2 chr2 25973282 - Exonic hg19 BRCA TCGA-BH-A18V-06A 2 4 Out-of-frame Intra-chr p23.3 p23.3 Seq+ 61645 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DTNB-ASXL2 DTNB chr2 25754342 - ASXL2 chr2 25994409 - Exonic hg19 STAD TCGA-BR-4357-01A 2 3 Out-of-frame Intra-chr p23.3 p23.3 Seq+ 61646 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DTNB-ASXL2 DTNB chr2 25818955 - ASXL2 chr2 25991737 - Exonic hg19 ESCA TCGA-L5-A8NE-01A 3 12 In-Frame Intra-chr p23.3 p23.3 Seq+ 61647 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DTNB-CNOT4 DTNB chr2 25674417 - CNOT4 chr7 135107102 - Exonic hg19 HNSC TCGA-CV-7424-01A 9 10 In-Frame Inter-chr p23.3 q33 Seq+ 61648 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DTNB-EXOC4 DTNB chr2 25896255 - EXOC4 chr7 133160082 + Exonic hg19 SARC TCGA-DX-A3LY-01B 2 4 5'UTR-CDS Inter-chr p23.3 q33 Seq+ 61649 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DTNB-RBKS DTNB chr2 25799707 - RBKS chr2 28081438 - Exonic hg19 BRCA TCGA-BH-A18T-01A 8 4 Out-of-frame Intra-chr p23.3 p23.2 Seq+ 61650 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DTNBP1-DNAH8 DTNBP1 chr6 15615498 - DNAH8 chr6 38979991 + Exonic hg19 BRCA TCGA-D8-A1JP-01A 4 1 Out-of-frame Intra-chr p22.3 p21.2 61651 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DTNBP1-PITPNC1 DTNBP1 chr6 15663045 - PITPNC1 chr17 65665624 + Exonic hg19 TGCT TCGA-2G-AALW-01A 13 9 Out-of-frame Inter-chr p22.3 q24.2 Seq+ 61652 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DTNBP1-RSBN1L DTNBP1 chr6 15663045 - RSBN1L chr7 77365727 + Exonic hg19 BRCA TCGA-C8-A12V-01A 2 1 Out-of-frame Inter-chr p22.3 q11.23 61653 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DTWD1-C15orf33 DTWD1 chr15 49917628 - C15orf33 chr15 49882204 - Exonic hg19 BRCA TCGA-D8-A1XZ-01A 4 10 In-Frame Intra-chr q21.2 61654 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DTX3-PLEKHA5 DTX3 chr12 57998641 - PLEKHA5 chr12 19473496 + Exonic hg19 LGG TCGA-TM-A84I-01A 3 8 5'UTR-CDS Intra-chr q13.3 p12.3 Seq+ 61655 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DTX4-CCDC102B DTX4 chr11 58959723 - CCDC102B chr18 66721267 + Exonic hg19 BRCA TCGA-A1-A0SJ-01A 6 5 In-Frame Inter-chr q12.1 q22.1 Seq+ 61656 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DUS1L-ASPSCR1 DUS1L chr17 80021344 - ASPSCR1 chr17 79943383 + Exonic hg19 STAD TCGA-HU-A4GH-01A 6 50 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 61657 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DUS1L-CCDC57 DUS1L chr17 80023489 - CCDC57 chr17 80092070 - Exonic hg19 LIHC TCGA-LG-A9QC-01A 2 5 5'UTR-CDS Intra-chr q25.3 q25.3 Seq+ 61658 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DUS2L-HSD11B2 DUS2L chr16 68105011 - HSD11B2 chr16 67470152 + Exonic hg19 SKCM TCGA-EB-A3Y7-01A 70 32 Out-of-frame Intra-chr q22.1 Seq+ 61659 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DUS2L-RLTPR DUS2L chr16 68090327 - RLTPR chr16 67689934 + Exonic hg19 LUAD TCGA-49-6744-01A 3 2 In-Frame Intra-chr 61660 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DUS2L-UNC5C DUS2L chr16 68072052 - UNC5C chr4 96171818 - Exonic hg19 BRCA TCGA-E2-A15T-01A 10 5 In-Frame Inter-chr q22.3 Tumor suppressor gene Seq+ 61661 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DUSP1-MFN1 DUSP1 chr5 172195093 - MFN1 chr3 179096011 + Exonic hg19 PRAD TCGA-QU-A6IO-01A 2 2 3'UTR-CDS Inter-chr q35.1 Tumor suppressor gene q26.33 61662 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DUSP10-SUSD4 DUSP10 chr1 221912276 - SUSD4 chr1 223442017 - Exonic hg19 LIHC TCGA-KR-A7K8-01A 8 15 In-Frame Intra-chr q41 q41 Seq+ 61663 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DUSP12-CR2 DUSP12 chr1 161719935 - CR2 chr1 207658809 + Exonic hg19 LUSC TCGA-46-3765-01A 17 9 In-Frame Intra-chr q23.3 q32.2 Seq+ 61664 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DUSP12-NAV1 DUSP12 chr1 161719935 - NAV1 chr1 201749549 + Exonic hg19 BRCA TCGA-AR-A0TT-01A 6 3 In-Frame Intra-chr q23.3 q32.1 Seq+ 61665 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DUSP14-ATP6V0A1 DUSP14 chr17 35850064 - ATP6V0A1 chr17 40629657 + Exonic hg19 LUSC TCGA-O2-A52S-01A 91 31 5'UTR-CDS Intra-chr q12 q21.2 Seq+ 61666 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DUSP14-EME1 DUSP14 chr17 35850064 - EME1 chr17 48452546 + Exonic hg19 BRCA TCGA-A8-A09I-01A 41 39 5'UTR-5'UTR Intra-chr q12 q21.33 Seq+ 61667 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DUSP16-GPR19 DUSP16 chr12 12639962 - GPR19 chr12 12837441 - Exonic hg19 BLCA TCGA-K4-A3WU-01B 8 11 CDS-5'UTR Intra-chr p13.1 Seq+ 61668 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DUSP16-LOH12CR1 DUSP16 chr12 12715051 - LOH12CR1 chr12 12588562 + Exonic hg19 PRAD TCGA-G9-7525-01A 18 8 5'UTR-CDS Intra-chr Seq+ 61669 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DUSP22-BEND6 DUSP22 chr6 311962 - BEND6 chr6 56846509 + Exonic hg19 SARC TCGA-IE-A6BZ-01A 48 19 CDS-5'UTR Intra-chr p25.3 Tumor suppressor gene p12.1 Seq+ 61670 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DUSP22-CECR5 DUSP22 chr6 311962 - CECR5 chr22 17630635 - Exonic hg19 SKCM TCGA-DA-A1I8-06A 9 10 In-Frame Inter-chr p25.3 Tumor suppressor gene Seq+ 61671 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DUSP22-PTK7 DUSP22 chr6 348841 - PTK7 chr6 43106587 + Exonic hg19 PRAD TCGA-EJ-A65E-01A 7 6 In-Frame Intra-chr p25.3 Tumor suppressor gene p21.1 Seq+ 61672 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DUSP7-PBRM1 DUSP7 chr3 52087956 - PBRM1 chr3 52588895 - Exonic hg19 BRCA TCGA-D8-A140-01A 8 1 In-Frame Intra-chr p21.2 p21.1 Oncogene Tumor suppressor gene Seq+ 61673 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DVL1-OPTN DVL1 chr1 1284276 - OPTN chr10 13154453 + Exonic hg19 UCS TCGA-NA-A4R0-01A 24 11 Out-of-frame Inter-chr p36.33 p13 Seq+ 61674 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DVL1-PLCH2 DVL1 chr1 1273357 - PLCH2 chr1 2433551 + Exonic hg19 SARC TCGA-DX-A7EU-01A 6 2 Out-of-frame Intra-chr p36.33 p36.32 61675 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DVL2-TFE3 DVL2 chr17 7133127 - TFE3 chrX 48896935 - Exonic hg19 KIRP TCGA-J7-8537-01A 30 28 In-Frame Inter-chr p13.1 p11.23 Oncogene Transcription factor KB Pub Seq+ 61676 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DVL3-RFX6 DVL3 chr3 183873584 - RFX6 chr6 117252494 + Exonic hg19 ESCA TCGA-R6-A8W5-01B 2 20 Out-of-frame Inter-chr q27.1 q22.1 Transcription factor Seq+ 61677 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYM-ACAA2 DYM chr18 46986768 - ACAA2 chr18 47329223 - Exonic hg19 PRAD TCGA-XJ-A9DX-01A 11 3 5'UTR-CDS Intra-chr q21.1 q21.1 Seq+ 61678 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYM-C10orf105 DYM chr18 46623772 - C10orf105 chr10 73476099 - Exonic hg19 PRAD TCGA-EJ-5521-01A 4 1 CDS-5'UTR Inter-chr q21.1 q22.1 61679 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYM-C18orf32 DYM chr18 46798548 - C18orf32 chr18 47010141 - Exonic hg19 PAAD TCGA-YH-A8SY-01A 3 3 CDS-5'UTR Intra-chr q21.1 q21.1 61680 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYM-CCDC11 DYM chr18 46623772 - CCDC11 chr18 47753979 - Exonic hg19 SARC TCGA-DX-A8BG-01A 9 3 Out-of-frame Intra-chr q21.1 61681 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYM-CTIF DYM chr18 46956625 - CTIF chr18 46343592 + Exonic hg19 BRCA TCGA-D8-A142-01A 12 6 Out-of-frame Intra-chr q21.1 Seq+ 61682 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYM-KATNAL2 DYM chr18 46889531 - KATNAL2 chr18 44579251 + Exonic hg19 PRAD TCGA-V1-A8WS-01A 9 3 CDS-5'UTR Intra-chr q21.1 q21.1 Seq+ 61683 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYM-MYO5B DYM chr18 46904937 - MYO5B chr18 47376030 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 5 3 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 61684 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYM-OAS3 DYM chr18 46986768 - OAS3 chr12 113379375 + Exonic hg19 SARC TCGA-DX-AATS-01A 9 7 5'UTR-CDS Inter-chr q21.1 q24.13 Seq+ 61685 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYM-SLC14A2 DYM chr18 46904937 - SLC14A2 chr18 43246102 + Exonic hg19 KIRC TCGA-B0-4844-01A 7 6 In-Frame Intra-chr q21.1 q12.3 Seq+ 61686 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYM-TMC7 DYM chr18 46783380 - TMC7 chr16 19051611 + Exonic hg19 SKCM TCGA-ER-A196-01A 12 12 Out-of-frame Inter-chr q21.1 p12.3 Seq+ 61687 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYNC1H1-CDHR3 DYNC1H1 chr14 102517128 - CDHR3 chr7 105668108 + Exonic hg19 LUSC TCGA-98-A53H-01A 2 22 Out-of-frame Inter-chr q32.31 q22.3 61688 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYNC1H1-EIF5 DYNC1H1 chr14 102517128 - EIF5 chr14 103805509 + Exonic hg19 LUSC TCGA-56-8629-01A 5 6 3'UTR-CDS Intra-chr q32.31 q32.32 61689 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYNC1H1-ERBB3 DYNC1H1 chr14 102517128 - ERBB3 chr12 56492035 + Exonic hg19 HNSC TCGA-UF-A718-01A 2 15 Out-of-frame Inter-chr q32.31 q13.2 Oncogene 61690 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYNC1H1-EVL DYNC1H1 chr14 102478807 - EVL chr14 100551024 + Exonic hg19 PRAD TCGA-YJ-A8SW-01A 45 31 Out-of-frame Intra-chr q32.31 q32.2 Seq+ 61691 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYNC1H1-MARCH11 DYNC1H1 chr14 102494478 - 2019_ 3_ 11_ chr5 16091190 - Exonic hg19 SARC TCGA-MB-A5Y9-01A 4 7 Out-of-frame Inter-chr q32.31 p15.1 Seq+ 61692 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYNC1H1-PPP2R5C DYNC1H1 chr14 102478807 - PPP2R5C chr14 102378738 + Exonic hg19 BRCA TCGA-A8-A06R-01A 20 108 Out-of-frame Intra-chr q32.31 q32.31 Tumor suppressor gene Seq+ 61693 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYNC1H1-PPP2R5C DYNC1H1 chr14 102458010 - PPP2R5C chr14 102323023 + Exonic hg19 SKCM TCGA-EE-A29D-06A 14 11 Out-of-frame Intra-chr q32.31 q32.31 Tumor suppressor gene Seq+ 61694 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYNC1H1-SIAE DYNC1H1 chr14 102517128 - SIAE chr11 124543777 - Exonic hg19 THCA TCGA-EM-A22N-01A 2 6 3'UTR-5'UTR Inter-chr q32.31 q24.2 61695 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYNC1I1-ALB DYNC1I1 chr7 95657633 - ALB chr4 74270034 + Exonic hg19 LIHC TCGA-XR-A8TE-01A 2 2 Out-of-frame Inter-chr q21.3 q13.3 61696 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYNC1I1-ASB4 DYNC1I1 chr7 95499310 - ASB4 chr7 95125070 + Exonic hg19 ACC TCGA-OR-A5J1-01A 5 4 In-Frame Intra-chr q21.3 q21.3 Seq+ 61697 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYNC1I1-CXCL11 DYNC1I1 chr7 95709800 - CXCL11 chr4 76957217 - Exonic hg19 LUSC TCGA-43-7658-01A 5 5 Out-of-frame Inter-chr q21.3 q21.1 Seq+ 61698 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYNC1I1-ZC3HAV1 DYNC1I1 chr7 95457428 - ZC3HAV1 chr7 138774505 - Exonic hg19 KIRP TCGA-B9-4116-01A 3 5 In-Frame Intra-chr q21.3 q34 Seq+ 61699 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYNC1I2-BRE DYNC1I2 chr2 172571953 - BRE chr2 28460069 + Exonic hg19 BRCA TCGA-OL-A5D8-01A 3 4 Out-of-frame Intra-chr q31.1 Seq+ 61700 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYNC1LI1-GADL1 DYNC1LI1 chr3 32611838 - GADL1 chr3 30903257 - Exonic hg19 GBM TCGA-14-0790-01B 2 2 In-Frame Intra-chr p22.3 p23 Seq+ 61701 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYNC1LI1-MRPS11 DYNC1LI1 chr3 32582529 - MRPS11 chr15 89020220 + Exonic hg19 PRAD TCGA-G9-6354-01A 35 24 In-Frame Inter-chr p22.3 q25.3 Seq+ 61702 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYNC1LI2-NAE1 DYNC1LI2 chr16 66783100 - NAE1 chr16 66839929 - Exonic hg19 ESCA TCGA-VR-A8Q7-01A 22 399 In-Frame Intra-chr q22.1 q22.1 Seq+ 61703 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYNC2H1-C11orf70 DYNC2H1 chr11 102999734 - C11orf70 chr11 101918546 + Exonic hg19 BLCA TCGA-C4-A0F0-01A 48 26 Out-of-frame Intra-chr q22.3 q22.1 Seq+ 61704 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYNC2H1-ENDOD1 DYNC2H1 chr11 103229087 - ENDOD1 chr11 94861541 + Exonic hg19 CESC TCGA-EX-A3L1-01A 2 2 In-Frame Intra-chr q22.3 q21 61705 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYNC2H1-KCNQ5 DYNC2H1 chr11 103339433 - KCNQ5 chr6 73787045 + Exonic hg19 BRCA TCGA-B6-A0I8-01A 3 1 Out-of-frame Inter-chr q22.3 q13 61706 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYNC2H1-KIAA1377 DYNC2H1 chr11 103229087 - KIAA1377 chr11 101863509 + Exonic hg19 CESC TCGA-MY-A913-01A 3 2 Out-of-frame Intra-chr q22.3 61707 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYNC2LI1-KCNN3 DYNC2LI1 chr2 44010693 - KCNN3 chr1 154698502 - Exonic hg19 SARC TCGA-DX-A7EU-01A 6 2 Out-of-frame Inter-chr p21 q21.3 61708 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYNLL1-COQ5 DYNLL1 chr12 120907907 - COQ5 chr12 120947926 - Exonic hg19 HNSC TCGA-F7-7848-01A 3 2 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 61709 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYNLL2-SEPT4 DYNLL2 chr17 56161044 - SEPT4 chr17 56603674 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 26 17 5'UTR-5'UTR Intra-chr q22 q22 Tumor suppressor gene Seq+ 61710 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYNLRB1-RALY DYNLRB1 chr20 33104266 - RALY chr20 32619328 + Exonic hg19 STAD TCGA-BR-4366-01A 16 44 CDS-5'UTR Intra-chr q11.22 q11.22 Seq+ 61711 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYNLT1-DUSP15 DYNLT1 chr6 159062351 - DUSP15 chr20 30457400 - Exonic hg19 PRAD TCGA-ZG-A8QZ-01A 19 10 In-Frame Inter-chr q25.3 q11.21 Seq+ 61712 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYNLT3-U2AF2 DYNLT3 chrX 37700281 - U2AF2 chr19 56179873 + Exonic hg19 LUAD TCGA-55-8094-01A 23 24 In-Frame Inter-chr p11.4 q13.42 Seq+ 61713 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYRK1A-BRWD1 DYRK1A chr21 38792686 - BRWD1 chr21 40574471 - Exonic hg19 BRCA TCGA-A2-A0CW-01A 4 6 Out-of-frame Intra-chr q22.13 CMGC:DYRK q22.2 Seq+ 61714 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYRK1A-HUNK DYRK1A chr21 38792686 - HUNK chr21 33296780 + Exonic hg19 KIRP TCGA-B9-A5W9-01A 6 18 Out-of-frame Intra-chr q22.13 CMGC:DYRK q22.11 CAMK:CAMKL Seq+ 61715 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYRK1A-IFNGR2 DYRK1A chr21 38739930 - IFNGR2 chr21 34793787 + Exonic hg19 HNSC TCGA-D6-A4Z9-01A 9 12 5'UTR-CDS Intra-chr q22.13 CMGC:DYRK Seq+ 61716 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYRK1A-KCNJ6 DYRK1A chr21 38792686 - KCNJ6 chr21 39087434 - Exonic hg19 PRAD TCGA-XK-AAJA-01A 4 5 In-Frame Intra-chr q22.13 CMGC:DYRK q22.13 Seq+ 61717 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYRK1A-KDM4B DYRK1A chr21 38739930 - KDM4B chr19 5039847 + Exonic hg19 BRCA TCGA-E2-A15A-01A 2 17 5'UTR-CDS Inter-chr q22.13 CMGC:DYRK p13.3 Seq+ 61718 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYRK1A-MRPS6 DYRK1A chr21 38858916 - MRPS6 chr21 35497641 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 43 23 Out-of-frame Intra-chr q22.13 CMGC:DYRK q22.11 Seq+ 61719 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYRK1A-RUNX1 DYRK1A chr21 38868560 - RUNX1 chr21 36265260 - Exonic hg19 HNSC TCGA-CQ-7065-01A 4 2 Out-of-frame Intra-chr q22.13 CMGC:DYRK q22.12 Oncogene Tumor suppressor gene Transcription factor 61720 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYRK1A-TTC3 DYRK1A chr21 38792686 - TTC3 chr21 38560796 + Exonic hg19 LUAD TCGA-67-3771-01A 5 5 Out-of-frame Intra-chr q22.13 CMGC:DYRK q22.13 Seq+ 61721 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYRK1A-ZBTB46 DYRK1A chr21 38845182 - ZBTB46 chr20 62422143 - Exonic hg19 BRCA TCGA-C8-A130-01A 42 28 CDS-5'UTR Inter-chr q22.13 CMGC:DYRK q13.33 Transcription factor Seq+ 61722 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYRK1B-DPF1 DYRK1B chr19 40324663 - DPF1 chr19 38713348 - Exonic hg19 UCS TCGA-NA-A4QV-01A 41 13 5'UTR-CDS Intra-chr CMGC:DYRK q13.2 Transcription factor Seq+ 61723 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYRK2-CNTN2 DYRK2 chr12 68043725 - CNTN2 chr1 205022228 + Exonic hg19 SARC TCGA-DX-A3U6-01A 28 8 5'UTR-5'UTR Inter-chr q15 CMGC:DYRK q32.1 Seq+ 61724 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYX1C1-LSAMP DYX1C1 chr15 55700419 - LSAMP chr3 116163802 - Exonic hg19 SKCM TCGA-FS-A4F9-06A 4 1 Out-of-frame Inter-chr q13.31 Tumor suppressor gene 61725 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DYX1C1-RFX7 DYX1C1 chr15 55783321 - RFX7 chr15 56436681 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 5 1 In-Frame Intra-chr q21.3 Transcription factor 61726 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DZIP1-PCCA DZIP1 chr13 96293549 - PCCA chr13 100982815 + Exonic hg19 BRCA TCGA-B6-A400-01A 2 1 Out-of-frame Intra-chr q32.1 Transcription factor q32.3 Seq+ 61727 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq DZIP1L-TXNDC6 DZIP1L chr3 137805803 - TXNDC6 chr3 138022485 - Exonic hg19 STAD TCGA-FP-8631-01A 3 17 Out-of-frame Intra-chr q22.3 61728 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq E2F3-FBXO9 E2F3 chr6 20404063 - FBXO9 chr6 52935855 + Exonic hg19 BRCA TCGA-LL-A740-01A 4 2 In-Frame Intra-chr p22.3 Tumor suppressor gene Transcription factor p12.1 Seq+ 61729 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq E2F3-MYL4 E2F3 chr6 20404063 - MYL4 chr17 45286755 + Exonic hg19 BLCA TCGA-GU-A764-01A 35 33 CDS-5'UTR Inter-chr p22.3 Tumor suppressor gene Transcription factor q21.32 Seq+ 61730 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq E2F6-LYRM4 E2F6 chr2 11605898 - LYRM4 chr6 5187214 - Exonic hg19 BRCA TCGA-A8-A09A-01A 4 1 In-Frame Inter-chr p25.1 Transcription factor p25.1 Seq+ 61731 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq E2F7-PTPRR E2F7 chr12 77426830 - PTPRR chr12 71158558 - Exonic hg19 SARC TCGA-FX-A2QS-01A 6 2 Out-of-frame Intra-chr q21.2 Transcription factor q15 61732 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EAF1-CAND2 EAF1 chr3 15469389 - CAND2 chr3 12913235 + Exonic hg19 PRAD TCGA-EJ-A65J-01A 3 4 Out-of-frame Intra-chr p25.1 Tumor suppressor gene p25.2 61733 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EAF1-SPATA16 EAF1 chr3 15469389 - SPATA16 chr3 172634271 - Exonic hg19 UCEC TCGA-AX-A3FW-01A 2 1 Out-of-frame Intra-chr p25.1 Tumor suppressor gene q26.31 61734 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EAF2-RGS9 EAF2 chr3 121554238 - RGS9 chr17 63221120 + Exonic hg19 BRCA TCGA-AO-A03L-01A 173 104 Out-of-frame Inter-chr q13.33 Tumor suppressor gene q24.1 Seq+ 61735 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EAPP-SNX6 EAPP chr14 35002650 - SNX6 chr14 35037219 - Exonic hg19 LUAD TCGA-78-7155-01A 21 16 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 61736 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EAPP-USP13 EAPP chr14 34993903 - USP13 chr3 179447977 + Exonic hg19 HNSC TCGA-BB-4217-01A 6 6 In-Frame Inter-chr q13.1 q26.33 Seq+ 61737 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EARS2-VMP1 EARS2 chr16 23555835 - VMP1 chr17 57915656 + Exonic hg19 LUAD TCGA-83-5908-01A 33 30 In-Frame Inter-chr p12.2 q23.1 Seq+ 61738 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EBF4-TMC2 EBF4 chr20 2674428 - TMC2 chr20 2621780 + Exonic hg19 GBM TCGA-06-0747-01A 2 12 Out-of-frame Intra-chr p13 Transcription factor p13 Seq+ 61739 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EBNA1BP2-FMO3 EBNA1BP2 chr1 43634610 - FMO3 chr1 171072926 + Exonic hg19 LIHC TCGA-EP-A3RK-01A 3 5 In-Frame Intra-chr p34.2 q24.3 61740 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EBPL-LPAR6 EBPL chr13 50265390 - LPAR6 chr13 48989946 - Exonic hg19 HNSC TCGA-BA-5555-01A 2 8 CDS-5'UTR Intra-chr q14.2 q14.2 Seq+ 61741 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EBPL-MIPEP EBPL chr13 50265390 - MIPEP chr13 24334356 - Exonic hg19 PRAD TCGA-HC-7233-01A 4 7 In-Frame Intra-chr q14.2 q12.12 Seq+ 61742 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ECD-CXCL12 ECD chr10 74923491 - CXCL12 chr10 44793345 - Exonic hg19 BRCA TCGA-E2-A1LA-01A 10 3 CDS-3'UTR Intra-chr q22.2 q11.21 Tumor suppressor gene 61743 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ECD-TTC18 ECD chr10 74927624 - TTC18 chr10 75091034 - Exonic hg19 LUSC TCGA-60-2695-01A 8 2 5'UTR-CDS Intra-chr q22.2 61744 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ECE1-FAM183A ECE1 chr1 21671869 - FAM183A chr1 43616432 + Exonic hg19 SKCM TCGA-EB-A42Z-01A 2 2 Out-of-frame Intra-chr p36.12 p34.2 61745 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ECE1-PLA2G5 ECE1 chr1 21616563 - PLA2G5 chr1 20411314 + Exonic hg19 SKCM TCGA-EB-A42Z-01A 12 2 CDS-5'UTR Intra-chr p36.12 p36.13 61746 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ECE1-WNT4 ECE1 chr1 21599192 - WNT4 chr1 22448069 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 81 44 In-Frame Intra-chr p36.12 p36.12 Seq+ 61747 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ECE2-HTR3C ECE2 chr3 183967678 - HTR3C chr3 183777616 + Exonic hg19 LUSC TCGA-56-5898-01A 47 31 In-Frame Intra-chr q27.1 q27.1 Seq+ 61748 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ECHDC1-FYN ECHDC1 chr6 127635961 - FYN chr6 112029223 - Exonic hg19 LUAD TCGA-97-8174-01A 31 6 In-Frame Intra-chr q22.33 q21 TK:Src Seq+ 61749 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ECI1-CDKN3 ECI1 chr16 2301317 - CDKN3 chr14 54868242 + Exonic hg19 PRAD TCGA-V1-A8WS-01A 2 5 Out-of-frame Inter-chr p13.3 q22.2 Seq+ 61750 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ECT2-DGKG ECT2 chr3 172486933 - DGKG chr3 186038496 - Exonic hg19 LUSC TCGA-77-8145-01A 3 1 CDS-5'UTR Intra-chr q26.31 Tumor suppressor gene q27.3 61751 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ECT2-KALRN ECT2 chr3 172491812 - KALRN chr3 124065990 + Exonic hg19 LUSC TCGA-60-2710-01A 20 10 In-Frame Intra-chr q26.31 Tumor suppressor gene q21.1 Seq+ 61752 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EDA-FAAH2 EDA chrX 68836548 - FAAH2 chrX 57318931 + Exonic hg19 LIHC TCGA-ED-A82E-01A 23 23 In-Frame Intra-chr q13.1 p11.21 Seq+ 61753 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EDA-TEX11 EDA chrX 68836548 - TEX11 chrX 70093157 - Exonic hg19 SARC TCGA-DX-A3M1-01A 21 13 In-Frame Intra-chr q13.1 q13.1 Seq+ 61754 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EDC3-SLC6A11 EDC3 chr15 74948074 - SLC6A11 chr3 10967690 + Exonic hg19 TGCT TCGA-2G-AAGA-01A 17 18 In-Frame Inter-chr q24.1 p25.3 Seq+ 61755 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EDC3-SNX29 EDC3 chr15 74988221 - SNX29 chr16 12293458 + Exonic hg19 BRCA TCGA-B6-A0IM-01A 27 28 5'UTR-CDS Inter-chr q24.1 p13.13 Seq+ 61756 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EDEM1-GPD1L EDEM1 chr3 5229999 - GPD1L chr3 32169568 + Exonic hg19 PRAD TCGA-KK-A8I6-01A 33 22 In-Frame Intra-chr p26.1 p22.3 Seq+ 61757 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EDEM1-ITPR1 EDEM1 chr3 5236966 - ITPR1 chr3 4887823 + Exonic hg19 UCEC TCGA-AP-A5FX-01A 7 8 In-Frame Intra-chr p26.1 p26.1 Seq+ 61758 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EDEM2-DOK5 EDEM2 chr20 33730176 - DOK5 chr20 53205022 + Exonic hg19 BRCA TCGA-BH-A0H7-01A 14 4 Out-of-frame Intra-chr q11.22 q13.2 61759 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EDEM2-PEX14 EDEM2 chr20 33859808 - PEX14 chr1 10659295 + Exonic hg19 STAD TCGA-BR-7197-01A 3 12 5'UTR-CDS Inter-chr q11.22 p36.22 Seq+ 61760 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EDEM2-UQCC EDEM2 chr20 33859808 - UQCC chr20 33935075 - Exonic hg19 KIRC TCGA-B0-5084-01A 3 3 5'UTR-CDS Intra-chr q11.22 61761 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EDEM2-UQCC EDEM2 chr20 33859808 - UQCC chr20 33935075 - Exonic hg19 SKCM TCGA-EB-A431-01A 13 8 5'UTR-CDS Intra-chr q11.22 61762 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EDEM3-HHAT EDEM3 chr1 184677287 - HHAT chr1 210847630 + Exonic hg19 PRAD TCGA-EJ-5518-01A 36 20 Out-of-frame Intra-chr q25.3 Seq+ 61763 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EDF1-DPP7 EDF1 chr9 139760633 - DPP7 chr9 140005402 - Exonic hg19 STAD TCGA-BR-7901-01A 5 21 In-Frame Intra-chr q34.3 q34.3 Seq+ 61764 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EDIL3-MAN1C1 EDIL3 chr5 83680126 - MAN1C1 chr1 26098148 + Exonic hg19 MESO TCGA-TS-A8AF-01A 3 1 In-Frame Inter-chr q14.3 p36.11 61765 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEA1-CRADD EEA1 chr12 93285405 - CRADD chr12 94243746 + Exonic hg19 BLCA TCGA-DK-A1AD-01A 40 22 Out-of-frame Intra-chr q22 Transcription factor q22 Seq+ 61766 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEA1-LRRIQ1 EEA1 chr12 93322819 - LRRIQ1 chr12 85497782 + Exonic hg19 ESCA TCGA-JY-A6FE-01A 3 25 Out-of-frame Intra-chr q22 Transcription factor q21.31 Seq+ 61767 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEA1-MPG EEA1 chr12 93285405 - MPG chr16 129424 + Exonic hg19 OV TCGA-04-1362-01A 10 6 In-Frame Inter-chr q22 Transcription factor p13.3 Seq+ 61768 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEA1-PAH EEA1 chr12 93258636 - PAH chr12 103249110 - Exonic hg19 BRCA TCGA-BH-A0B7-01A 10 8 In-Frame Intra-chr q22 Transcription factor q23.2 Seq+ 61769 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEA1-TMCC3 EEA1 chr12 93285405 - TMCC3 chr12 94976314 - Exonic hg19 BRCA TCGA-AC-A5EH-01A 8 3 In-Frame Intra-chr q22 Transcription factor q22 Seq+ 61770 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEA1-UBE2N EEA1 chr12 93285405 - UBE2N chr12 93805075 - Exonic hg19 LUAD TCGA-55-A491-01A 27 13 In-Frame Intra-chr q22 Transcription factor q22 Seq+ 61771 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEA1-UBE2N EEA1 chr12 93322819 - UBE2N chr12 93805075 - Exonic hg19 ESCA TCGA-L5-A4OQ-01A 12 55 In-Frame Intra-chr q22 Transcription factor q22 Seq+ 61772 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEA1-UBL3 EEA1 chr12 93181643 - UBL3 chr13 30351400 - Exonic hg19 PRAD TCGA-EJ-5516-01A 24 31 In-Frame Inter-chr q22 Transcription factor q12.3 Seq+ 61773 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF1A2-DKKL1 EEF1A2 chr20 62121832 - DKKL1 chr19 49877974 + Exonic hg19 BRCA TCGA-D8-A1XD-01A 296 171 In-Frame Inter-chr q13.33 q13.33 Seq+ 61774 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF1A2-ZBTB46 EEF1A2 chr20 62124490 - ZBTB46 chr20 62407315 - Exonic hg19 LUAD TCGA-44-2656-01A 13 8 In-Frame Intra-chr q13.33 q13.33 Transcription factor Seq+ 61775 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF1D-TSTA3 EEF1D chr8 144679518 - TSTA3 chr8 144697085 - Exonic hg19 LUAD TCGA-53-7624-01A 5 38 5'UTR-CDS Intra-chr Seq+ 61776 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF1E1-EYS EEF1E1 chr6 8095611 - EYS chr6 66205886 - Exonic hg19 BRCA TCGA-A8-A0AD-01A 2 3 CDS-5'UTR Intra-chr p24.3 Tumor suppressor gene q12 61777 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF1G-NXF1 EEF1G chr11 62334278 - NXF1 chr11 62563817 - Exonic hg19 SKCM TCGA-EE-A20F-06A 11 258 In-Frame Intra-chr q12.3 q12.3 Seq+ 61778 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-ANKS1A EEF2 chr19 3976055 - ANKS1A chr6 34977682 + Exonic hg19 THCA TCGA-EM-A1YA-01A 2 28 Out-of-frame Inter-chr p13.3 p21.31 61779 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-ANKS1A EEF2 chr19 3976055 - ANKS1A chr6 34977682 + Exonic hg19 KICH TCGA-KM-8639-01A 2 77 Out-of-frame Inter-chr p13.3 p21.31 61780 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-ARFGEF2 EEF2 chr19 3976055 - ARFGEF2 chr20 47615777 + Exonic hg19 KIRP TCGA-A4-A5Y1-01A 2 37 Out-of-frame Inter-chr p13.3 q13.13 61781 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-ARFGEF2 EEF2 chr19 3976055 - ARFGEF2 chr20 47615777 + Exonic hg19 THCA TCGA-ET-A3BO-01A 2 39 Out-of-frame Inter-chr p13.3 q13.13 61782 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-ARFGEF2 EEF2 chr19 3976055 - ARFGEF2 chr20 47615777 + Exonic hg19 KICH TCGA-KL-8332-01A 2 103 Out-of-frame Inter-chr p13.3 q13.13 61783 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-CBS EEF2 chr19 3976055 - CBS chr21 44476011 - Exonic hg19 LUAD TCGA-86-A4D0-01A 2 87 Out-of-frame Inter-chr p13.3 q22.3 61784 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-CLCN3 EEF2 chr19 3976055 - CLCN3 chr4 170623929 + Exonic hg19 HNSC TCGA-BB-4223-01A 2 5 Out-of-frame Inter-chr p13.3 q33 61785 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-CLCN3 EEF2 chr19 3976055 - CLCN3 chr4 170623929 + Exonic hg19 BLCA TCGA-CF-A27C-01A 2 68 Out-of-frame Inter-chr p13.3 q33 61786 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-DDX21 EEF2 chr19 3976055 - DDX21 chr10 70723858 + Exonic hg19 TGCT TCGA-SB-A6J6-01A 2 18 Out-of-frame Inter-chr p13.3 q22.1 61787 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-DDX27 EEF2 chr19 3976055 - DDX27 chr20 47849303 + Exonic hg19 STAD TCGA-BR-8589-01A 2 2 Out-of-frame Inter-chr p13.3 q13.13 61788 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-DDX27 EEF2 chr19 3976055 - DDX27 chr20 47849303 + Exonic hg19 COAD TCGA-CM-4747-01A 2 20 Out-of-frame Inter-chr p13.3 q13.13 61789 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-EEA1 EEF2 chr19 3976055 - EEA1 chr12 93229203 - Exonic hg19 SARC TCGA-HB-A3YV-01A 2 49 Out-of-frame Inter-chr p13.3 q22 Transcription factor 61790 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-EIF2AK2 EEF2 chr19 3976055 - EIF2AK2 chr2 37342384 - Exonic hg19 STAD TCGA-BR-8679-01A 2 3 Out-of-frame Inter-chr p13.3 p22.2 61791 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-EIF2AK2 EEF2 chr19 3976055 - EIF2AK2 chr2 37342384 - Exonic hg19 BLCA TCGA-G2-A3VY-01A 2 17 Out-of-frame Inter-chr p13.3 p22.2 61792 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-EIF2AK2 EEF2 chr19 3976055 - EIF2AK2 chr2 37342384 - Exonic hg19 CESC TCGA-LP-A5U2-01A 2 9 Out-of-frame Inter-chr p13.3 p22.2 61793 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-ERBB3 EEF2 chr19 3976055 - ERBB3 chr12 56492035 + Exonic hg19 THCA TCGA-ET-A3DR-01A 2 24 Out-of-frame Inter-chr p13.3 q13.2 Oncogene 61794 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-FAR1 EEF2 chr19 3976055 - FAR1 chr11 13744912 + Exonic hg19 STAD TCGA-BR-8680-01A 2 5 Out-of-frame Inter-chr p13.3 p15.3 61795 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-LAMA4 EEF2 chr19 3976055 - LAMA4 chr6 112507969 - Exonic hg19 SARC TCGA-KD-A5QU-01A 2 3 Out-of-frame Inter-chr p13.3 q21 61796 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-LIPF EEF2 chr19 3972316 - LIPF chr10 90424198 + Exonic hg19 STAD TCGA-CG-4301-01A 2 1 Out-of-frame Inter-chr p13.3 q23.31 61797 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-PABPC1 EEF2 chr19 3972316 - PABPC1 chr8 101734220 - Exonic hg19 UVM TCGA-V4-A9E7-01A 2 1 Out-of-frame Inter-chr p13.3 q22.3 61798 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-PLEKHA5 EEF2 chr19 3976055 - PLEKHA5 chr12 19441012 + Exonic hg19 LUAD TCGA-86-6851-01A 2 52 Out-of-frame Inter-chr p13.3 p12.3 61799 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-SEC63 EEF2 chr19 3976055 - SEC63 chr6 108214782 - Exonic hg19 ACC TCGA-OR-A5KT-01A 2 67 Out-of-frame Inter-chr p13.3 q21 61800 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-SEC63 EEF2 chr19 3976055 - SEC63 chr6 108214782 - Exonic hg19 TGCT TCGA-XE-AAO3-01A 2 122 Out-of-frame Inter-chr p13.3 q21 61801 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-SIAE EEF2 chr19 3976055 - SIAE chr11 124543777 - Exonic hg19 KIRC TCGA-CW-5581-01A 2 3 3'UTR-5'UTR Inter-chr p13.3 q24.2 61802 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-THSD4 EEF2 chr19 3976055 - THSD4 chr15 72072881 + Exonic hg19 LUAD TCGA-44-5644-01A 2 47 Out-of-frame Inter-chr p13.3 q23 61803 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-THSD4 EEF2 chr19 3976055 - THSD4 chr15 72072881 + Exonic hg19 KICH TCGA-KL-8323-01A 2 108 Out-of-frame Inter-chr p13.3 q23 61804 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-THSD4 EEF2 chr19 3976055 - THSD4 chr15 72072881 + Exonic hg19 KICH TCGA-KL-8342-01A 2 91 Out-of-frame Inter-chr p13.3 q23 61805 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-TYK2 EEF2 chr19 3976055 - TYK2 chr19 10491352 - Exonic hg19 DLBC TCGA-GS-A9TT-01A 2 10 Out-of-frame Intra-chr p13.3 p13.2 TK:JakA 61806 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2-TYK2 EEF2 chr19 3976055 - TYK2 chr19 10491352 - Exonic hg19 ACC TCGA-OR-A5JG-01A 2 12 Out-of-frame Intra-chr p13.3 p13.2 TK:JakA 61807 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2K-ACSM3 EEF2K chr16 22262643 - ACSM3 chr16 20781306 + Exonic hg19 KIRP TCGA-BQ-5887-01A 5 6 CDS-5'UTR Intra-chr p12.2 p12.3 Seq+ 61808 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2K-C10orf35 EEF2K chr16 22218000 - C10orf35 chr10 71391236 + Exonic hg19 LUSC TCGA-77-6845-01A 5 5 5'UTR-5'UTR Inter-chr p12.2 q22.1 Seq+ 61809 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2K-UQCRC2 EEF2K chr16 22276201 - UQCRC2 chr16 21982846 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 28 12 Out-of-frame Intra-chr p12.2 Seq+ 61810 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2K-VWA3A EEF2K chr16 22285071 - VWA3A chr16 22155568 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 2 3 Out-of-frame Intra-chr p12.2 Seq+ 61811 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2K-VWA3A EEF2K chr16 22237296 - VWA3A chr16 22157557 + Exonic hg19 LIHC TCGA-G3-AAV1-01A 14 8 In-Frame Intra-chr p12.2 Seq+ 61812 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEF2K-VWA3A EEF2K chr16 22256051 - VWA3A chr16 22149681 + Exonic hg19 BRCA TCGA-OL-A66P-01A 2 3 Out-of-frame Intra-chr p12.2 Seq+ 61813 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEFSEC-CD96 EEFSEC chr3 127983624 - CD96 chr3 111286370 + Exonic hg19 SARC TCGA-DX-A8BR-01A 2 2 Out-of-frame Intra-chr q21.3 q13.13 Seq+ 61814 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEFSEC-NSMCE2 EEFSEC chr3 128077216 - NSMCE2 chr8 126163413 + Exonic hg19 BLCA TCGA-FD-A6TG-01A 6 2 In-Frame Inter-chr q21.3 q24.13 61815 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EEFSEC-PPP2R3A EEFSEC chr3 127983624 - PPP2R3A chr3 135863885 + Exonic hg19 CESC TCGA-VS-A8EJ-01A 2 4 Out-of-frame Intra-chr q21.3 q22.2 Seq+ 61816 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFCAB11-ASB2 EFCAB11 chr14 90397885 - ASB2 chr14 94420829 - Exonic hg19 BRCA TCGA-A8-A08I-01A 8 6 In-Frame Intra-chr q32.11 Seq+ 61817 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFCAB11-C14orf180 EFCAB11 chr14 90397885 - C14orf180 chr14 105052752 + Exonic hg19 LIHC TCGA-DD-A1EI-01A 3 1 CDS-5'UTR Intra-chr q32.11 q32.33 61818 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFCAB2-SDCCAG8 EFCAB2 chr1 245222760 - SDCCAG8 chr1 243449574 + Exonic hg19 LUAD TCGA-78-7155-01A 10 2 In-Frame Intra-chr q44 Seq+ 61819 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFCAB4B-C12orf4 EFCAB4B chr12 3782612 - C12orf4 chr12 4600400 - Exonic hg19 GBM TCGA-06-5856-01A 6 7 Out-of-frame Intra-chr p13.32 Seq+ 61820 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFCAB4B-SYT10 EFCAB4B chr12 3805938 - SYT10 chr12 33579430 - Exonic hg19 SARC TCGA-X6-A8C6-01A 3 2 Out-of-frame Intra-chr p11.1 61821 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFCAB5-ACACA EFCAB5 chr17 28296385 - ACACA chr17 35564714 - Exonic hg19 CHOL TCGA-W5-AA31-01A 3 3 In-Frame Intra-chr q11.2 61822 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFCAB6-OSBP2 EFCAB6 chr22 44178060 - OSBP2 chr22 31090195 + Exonic hg19 KIRP TCGA-P4-A5EB-01A 7 2 CDS-5'UTR Intra-chr q13.31 q12.2 Seq+ 61823 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFCAB8-TNNC2 EFCAB8 chr20 31484333 - TNNC2 chr20 44453473 - Exonic hg19 PRAD TCGA-J9-A8CN-01A 9 11 Out-of-frame Intra-chr q11.21 q13.12 Seq+ 61824 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFEMP2-C6orf132 EFEMP2 chr11 65637328 - C6orf132 chr6 42096516 - Exonic hg19 STAD TCGA-BR-8590-01A 5 10 In-Frame Inter-chr q13.1 p21.1 Seq+ 61825 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFHA1-ATP8A2 EFHA1 chr13 22178078 - ATP8A2 chr13 26402256 + Exonic hg19 BRCA TCGA-E9-A22D-01A 13 16 In-Frame Intra-chr q12.13 Seq+ 61826 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFHA1-CD101 EFHA1 chr13 22140936 - CD101 chr1 117552472 + Exonic hg19 ESCA TCGA-L5-A8NI-01A 2 4 In-Frame Inter-chr p13.1 Seq+ 61827 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFHA1-CECR5 EFHA1 chr13 22178078 - CECR5 chr22 17630635 - Exonic hg19 SARC TCGA-DX-A8BS-01A 5 1 In-Frame Inter-chr 61828 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFHA2-TGFBR3 EFHA2 chr8 16885169 - TGFBR3 chr1 92200516 - Exonic hg19 SKCM TCGA-EE-A29L-06A 29 8 In-Frame Inter-chr p22.1 Tumor suppressor gene 61829 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFHB-PLCL2 EFHB chr3 19977633 - PLCL2 chr3 17131225 + Exonic hg19 BRCA TCGA-AR-A0TZ-01A 5 2 5'UTR-CDS Intra-chr p24.3 61830 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFHC1-IL17A EFHC1 chr6 52344585 - IL17A chr6 52052401 + Exonic hg19 UCEC TCGA-PG-A915-01A 3 2 Out-of-frame Intra-chr p12.2 p12.2 Tumor suppressor gene Seq+ 61831 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFHC1-LPHN3 EFHC1 chr6 52288965 - LPHN3 chr4 62362839 + Exonic hg19 BRCA TCGA-BH-A0HY-01A 3 6 5'UTR-5'UTR Inter-chr p12.2 Seq+ 61832 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFHD1-EIF4E2 EFHD1 chr2 233537153 - EIF4E2 chr2 233428957 + Exonic hg19 BRCA TCGA-AO-A0JE-01A 339 314 In-Frame Intra-chr q37.1 q37.1 Seq+ 61833 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFHD1-EIF4E2 EFHD1 chr2 233537153 - EIF4E2 chr2 233431539 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 219 242 In-Frame Intra-chr q37.1 q37.1 Seq+ 61834 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFHD2-CXCR5 EFHD2 chr1 15756826 - CXCR5 chr11 118754475 + Exonic hg19 BLCA TCGA-HQ-A5ND-01A 2 9 3'UTR-5'UTR Inter-chr p36.21 q23.3 61835 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFHD2-FHAD1 EFHD2 chr1 15736775 - FHAD1 chr1 15695866 + Exonic hg19 LUAD TCGA-L9-A7SV-01A 5 1 In-Frame Intra-chr p36.21 p36.21 Seq+ 61836 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFNA1-ADAM15 EFNA1 chr1 155104110 - ADAM15 chr1 155034936 + Exonic hg19 LIHC TCGA-ZS-A9CF-01A 14 11 Out-of-frame Intra-chr q22 q21.3 Seq+ 61837 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFNA3-FLAD1 EFNA3 chr1 155051545 - FLAD1 chr1 154965189 + Exonic hg19 LUSC TCGA-66-2771-01A 13 10 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 61838 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFNA3-HFE2 EFNA3 chr1 155051545 - HFE2 chr1 145415279 + Exonic hg19 LUAD TCGA-78-7539-01A 3 1 Out-of-frame Intra-chr q21.3 q21.1 61839 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFNA3-USP21 EFNA3 chr1 155058681 - USP21 chr1 161130410 + Exonic hg19 BRCA TCGA-AR-A0TT-01A 27 3 CDS-5'UTR Intra-chr q21.3 q23.3 Seq+ 61840 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFNA4-C20orf96 EFNA4 chr1 155039916 - C20orf96 chr20 264722 - Exonic hg19 BRCA TCGA-E2-A109-01A 7 3 In-Frame Inter-chr q21.3 p13 Seq+ 61841 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFNA4-FLAD1 EFNA4 chr1 155039916 - FLAD1 chr1 154965189 + Exonic hg19 LUSC TCGA-66-2771-01A 4 5 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 61842 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFNA4-FLAD1 EFNA4 chr1 155039916 - FLAD1 chr1 154960581 + Exonic hg19 BRCA TCGA-E2-A1LE-01A 5 2 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 61843 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFNA5-MCC EFNA5 chr5 107006190 - MCC chr5 112720909 - Exonic hg19 BLCA TCGA-G2-AA3B-01A 3 1 In-Frame Intra-chr q21.3 Tumor suppressor gene q22.2 Tumor suppressor gene 61844 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFR3A-ASAP1 EFR3A chr8 133008744 - ASAP1 chr8 131249240 - Exonic hg19 BRCA TCGA-BH-A0AV-01A 2 2 In-Frame Intra-chr q24.22 q24.22 Seq+ 61845 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFR3A-SLFN12L EFR3A chr8 132958880 - SLFN12L chr17 33807214 - Exonic hg19 PCPG TCGA-SR-A6MP-01A 3 5 Out-of-frame Inter-chr q24.22 q12 Seq+ 61846 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFR3A-ZFAT EFR3A chr8 132999949 - ZFAT chr8 135577664 - Exonic hg19 LUAD TCGA-78-8640-01A 57 22 In-Frame Intra-chr q24.22 q24.22 Transcription factor Seq+ 61847 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFR3B-NCAN EFR3B chr2 25314270 - NCAN chr19 19327756 + Exonic hg19 LUSC TCGA-52-7809-01A 2 2 CDS-5'UTR Inter-chr p23.3 p13.11 Seq+ 61848 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFTUD1-CDADC1 EFTUD1 chr15 82507058 - CDADC1 chr13 49848427 + Exonic hg19 HNSC TCGA-CV-7102-01A 2 9 In-Frame Inter-chr q14.2 Seq+ 61849 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFTUD1-KHDRBS2 EFTUD1 chr15 82507058 - KHDRBS2 chr6 62390965 - Exonic hg19 LUSC TCGA-21-1072-01A 4 6 In-Frame Inter-chr q11.1 Seq+ 61850 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFTUD2-C1QL1 EFTUD2 chr17 42945175 - C1QL1 chr17 43037735 - Exonic hg19 LUAD TCGA-62-A46U-01A 16 12 In-Frame Intra-chr q21.31 q21.31 Seq+ 61851 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFTUD2-DUSP3 EFTUD2 chr17 42961017 - DUSP3 chr17 41847182 - Exonic hg19 PRAD TCGA-HC-7209-01A 9 14 Out-of-frame Intra-chr q21.31 q21.31 Seq+ 61852 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFTUD2-GFAP EFTUD2 chr17 42953302 - GFAP chr17 42991456 - Exonic hg19 KIRP TCGA-GL-A9DE-01A 14 11 In-Frame Intra-chr q21.31 q21.31 Seq+ 61853 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFTUD2-KRT24 EFTUD2 chr17 42956924 - KRT24 chr17 38858185 - Exonic hg19 HNSC TCGA-CN-5370-01A 126 83 In-Frame Intra-chr q21.31 q21.2 Seq+ 61854 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFTUD2-PLEKHM1 EFTUD2 chr17 42971785 - PLEKHM1 chr17 43523029 - Exonic hg19 UCS TCGA-N5-A4RU-01A 2 2 In-Frame Intra-chr q21.31 61855 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EFTUD2-SIN3A EFTUD2 chr17 42931637 - SIN3A chr15 75664550 - Exonic hg19 PRAD TCGA-J4-A67M-01A 6 3 Out-of-frame Inter-chr q21.31 q24.2 Seq+ 61856 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EGFR-ACADM EGFR chr7 55087058 - ACADM chr1 76198329 + Exonic hg19 HNSC TCGA-CV-6941-01A 120 48 In-Frame Inter-chr p11.2 TK:EGFR Oncogene p31.1 Seq+ 61857 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EGFR-DYM EGFR chr7 55087058 - DYM chr18 46918015 - Exonic hg19 HNSC TCGA-BA-6872-01A 10 5 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.1 Seq+ 61858 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EGFR-ERP44 EGFR chr7 55087058 - ERP44 chr9 102784508 - Exonic hg19 GBM TCGA-06-0744-01A 11 32 In-Frame Inter-chr p11.2 TK:EGFR Oncogene q31.1 Seq+ 61859 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EGFR-GNS EGFR chr7 55240817 - GNS chr12 65110599 - Exonic hg19 GBM TCGA-19-2624-01A 24 37 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q14.3 Seq+ 61860 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EGFR-GRB10 EGFR chr7 55087058 - GRB10 chr7 50742355 - Exonic hg19 BLCA TCGA-GC-A6I3-01A 4 5 In-Frame Intra-chr p11.2 TK:EGFR Oncogene p12.1 Seq+ 61861 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EGFR-LYST EGFR chr7 55087058 - LYST chr1 235996967 - Exonic hg19 LIHC TCGA-2Y-A9H0-01A 13 6 CDS-5'UTR Inter-chr p11.2 TK:EGFR Oncogene q42.3 Seq+ 61862 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EGFR-PPM1H EGFR chr7 55087058 - PPM1H chr12 63195940 - Exonic hg19 GBM TCGA-19-2624-01A 32 99 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q14.2 Seq+ 61863 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55268106 - SEPT14 chr7 55863785 - Exonic hg19 GBM TCGA-06-0750-01A 6 196 In-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 61864 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55268106 - SEPT14 chr7 55863785 - Exonic hg19 GBM TCGA-27-1837-01A 22 434 In-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 61865 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55268106 - SEPT14 chr7 55863785 - Exonic hg19 GBM TCGA-28-1747-01C 13 94 In-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 61866 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55268106 - SEPT14 chr7 55863785 - Exonic hg19 GBM TCGA-28-2513-01A 34 844 In-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 61867 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55268106 - SEPT14 chr7 55863785 - Exonic hg19 GBM TCGA-32-5222-01A 17 587 In-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 61868 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55087058 - SEPT14 chr7 55874951 - Exonic hg19 HNSC TCGA-CR-7368-01A 2 6 In-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 61869 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55268106 - SEPT14 chr7 55863785 - Exonic hg19 LGG TCGA-DU-6406-01A 470 2490 In-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 61870 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EGFR-TEAD2 EGFR chr7 55087058 - TEAD2 chr19 49862756 - Exonic hg19 LUSC TCGA-85-8351-01A 17 12 In-Frame Inter-chr p11.2 TK:EGFR Oncogene q13.33 Transcription factor Seq+ 61871 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EGLN1-PGBD5 EGLN1 chr1 231556744 - PGBD5 chr1 230493067 - Exonic hg19 BRCA TCGA-AR-A0TT-01A 4 2 Out-of-frame Intra-chr q42.2 Tumor suppressor gene q42.13 Seq+ 61872 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EGLN1-PTPRF EGLN1 chr1 231556744 - PTPRF chr1 44083116 + Exonic hg19 LUSC TCGA-43-8115-01A 13 5 In-Frame Intra-chr q42.2 Tumor suppressor gene p34.2 Seq+ 61873 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EGLN2-PLD3 EGLN2 chr19 41307320 - PLD3 chr19 40877580 + Exonic hg19 LUSC TCGA-66-2759-01A 44 25 In-Frame Intra-chr q13.2 q13.2 Seq+ 61874 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EGR1-FAR1 EGR1 chr5 137805004 - FAR1 chr11 13744912 + Exonic hg19 LUSC TCGA-56-8623-01A 2 2 Out-of-frame Inter-chr q31.2 Tumor suppressor gene Transcription factor p15.3 61875 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EGR1-PLAT EGR1 chr5 137805004 - PLAT chr8 42051245 - Exonic hg19 PRAD TCGA-EJ-7314-01A 2 5 Out-of-frame Inter-chr q31.2 Tumor suppressor gene Transcription factor p11.21 61876 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EHBP1-BCL11A EHBP1 chr2 63101667 - BCL11A chr2 60679801 - Exonic hg19 BRCA TCGA-D8-A147-01A 35 30 In-Frame Intra-chr p15 p16.1 Oncogene Transcription factor Seq+ 61877 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EHBP1-COMMD1 EHBP1 chr2 63182795 - COMMD1 chr2 62227836 + Exonic hg19 LUAD TCGA-44-7660-01A 9 4 In-Frame Intra-chr p15 p15 Seq+ 61878 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EHBP1-COMMD1 EHBP1 chr2 62991496 - COMMD1 chr2 62362966 + Exonic hg19 LUSC TCGA-63-A5MR-01A 168 53 In-Frame Intra-chr p15 p15 Seq+ 61879 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EHBP1-COMMD1 EHBP1 chr2 62998527 - COMMD1 chr2 62362966 + Exonic hg19 BRCA TCGA-AR-A1AO-01A 26 21 In-Frame Intra-chr p15 p15 Seq+ 61880 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EHBP1-COMMD1 EHBP1 chr2 63223901 - COMMD1 chr2 62362966 + Exonic hg19 LIHC TCGA-DD-A3A5-01A 296 138 Out-of-frame Intra-chr p15 p15 Seq+ 61881 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EHBP1-COMMD1 EHBP1 chr2 62998527 - COMMD1 chr2 62227836 + Exonic hg19 BLCA TCGA-GV-A40E-01A 18 2 In-Frame Intra-chr p15 p15 Seq+ 61882 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EHBP1-COMMD1 EHBP1 chr2 62974587 - COMMD1 chr2 62227836 + Exonic hg19 STAD TCGA-VQ-A925-01A 5 55 In-Frame Intra-chr p15 p15 Seq+ 61883 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EHBP1-FAM59B EHBP1 chr2 63223901 - FAM59B chr2 26399213 + Exonic hg19 BRCA TCGA-A8-A07C-01A 13 4 In-Frame Intra-chr p15 Seq+ 61884 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EHBP1-VAV2 EHBP1 chr2 63101667 - VAV2 chr9 136726554 - Exonic hg19 LUSC TCGA-NC-A5HN-01A 11 3 In-Frame Inter-chr p15 q34.2 Seq+ 61885 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EHD1-ADRBK2 EHD1 chr11 64627396 - ADRBK2 chr22 26057543 + Exonic hg19 LGG TCGA-HT-7686-01A 9 8 In-Frame Inter-chr q13.1 Seq+ 61886 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EHD1-ATG2A EHD1 chr11 64645533 - ATG2A chr11 64662681 - Exonic hg19 OV TCGA-13-0801-01A 8 17 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 61887 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EHD1-BATF2 EHD1 chr11 64641893 - BATF2 chr11 64757284 - Exonic hg19 LUAD TCGA-44-6778-01A 19 10 Out-of-frame Intra-chr q13.1 q13.1 Tumor suppressor gene Transcription factor Seq+ 61888 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EHD1-BATF2 EHD1 chr11 64641893 - BATF2 chr11 64762021 - Exonic hg19 PRAD TCGA-YL-A9WK-01A 5 6 Out-of-frame Intra-chr q13.1 q13.1 Tumor suppressor gene Transcription factor Seq+ 61889 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EHD4-FSIP1 EHD4 chr15 42211408 - FSIP1 chr15 39910446 - Exonic hg19 BRCA TCGA-A1-A0SB-01A 22 15 In-Frame Intra-chr q15.1 q14 Seq+ 61890 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EHD4-GPR176 EHD4 chr15 42264457 - GPR176 chr15 40099459 - Exonic hg19 SKCM TCGA-EB-A550-01A 4 2 Out-of-frame Intra-chr q15.1 q15.1 Seq+ 61891 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EHHADH-ABCC5 EHHADH chr3 184922204 - ABCC5 chr3 183696439 - Exonic hg19 BRCA TCGA-D8-A27N-01A 2 1 In-Frame Intra-chr q27.2 q27.1 Seq+ 61892 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EHMT1-ARRDC1 EHMT1 chr9 140513501 - ARRDC1 chr9 140507348 + Exonic hg19 BRCA TCGA-PL-A8LZ-01A 2 49 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 61893 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EHMT1-GFI1B EHMT1 chr9 140513501 - GFI1B chr9 135862046 + Exonic hg19 CESC TCGA-C5-A7XC-01A 2 17 CDS-5'UTR Intra-chr q34.3 q34.13 Transcription factor Seq+ 61894 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EHMT1-GRIN1 EHMT1 chr9 140611634 - GRIN1 chr9 140036465 + Exonic hg19 BRCA TCGA-A7-A6VY-01A 3 2 In-Frame Intra-chr q34.3 q34.3 Seq+ 61895 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EHMT1-GRIN1 EHMT1 chr9 140707982 - GRIN1 chr9 140036465 + Exonic hg19 PRAD TCGA-EJ-A46G-01A 35 14 In-Frame Intra-chr q34.3 q34.3 Seq+ 61896 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EHMT1-LRRC68 EHMT1 chr9 140622981 - LRRC68 chr19 45641772 + Exonic hg19 BLCA TCGA-H4-A2HO-01A 17 16 Out-of-frame Inter-chr q34.3 61897 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EHMT2-ATF6B EHMT2 chr6 31848791 - ATF6B chr6 32089125 - Exonic hg19 SARC TCGA-FX-A3TO-01A 2 3 Out-of-frame Intra-chr Transcription factor 61898 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EI24-FEZ1 EI24 chr11 125442465 - FEZ1 chr11 125359718 - Exonic hg19 LGG TCGA-E1-A7YW-01A 6 6 CDS-5'UTR Intra-chr q24.2 Tumor suppressor gene q24.2 Tumor suppressor gene Seq+ 61899 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF1-MED28 EIF1 chr17 39846193 - MED28 chr4 17621524 + Exonic hg19 BRCA TCGA-D8-A1X5-01A 144 195 In-Frame Inter-chr q21.2 p15.32 Seq+ 61900 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF1AD-CATSPER1 EIF1AD chr11 65766821 - CATSPER1 chr11 65784645 - Exonic hg19 LIHC TCGA-DD-AADB-01A 2 2 In-Frame Intra-chr q13.1 q13.1 Seq+ 61901 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2A-ANKUB1 EIF2A chr3 150270212 - ANKUB1 chr3 149479400 - Exonic hg19 OV TCGA-24-2290-01A 9 2 In-Frame Intra-chr q25.1 q25.1 Seq+ 61902 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2AK1-GCK EIF2AK1 chr7 6094177 - GCK chr7 44189663 - Exonic hg19 LIHC TCGA-ZS-A9CF-01A 41 29 Out-of-frame Intra-chr p22.1 p13 STE:STE20 Seq+ 61903 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2AK1-GCK EIF2AK1 chr7 6094177 - GCK chr7 44189663 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 59 36 Out-of-frame Intra-chr p22.1 p13 STE:STE20 Seq+ 61904 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2AK1-GLCCI1 EIF2AK1 chr7 6064340 - GLCCI1 chr7 8124527 + Exonic hg19 LGG TCGA-E1-A7Z2-01A 4 2 Out-of-frame Intra-chr p22.1 p21.3 Seq+ 61905 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2AK1-MAP2K5 EIF2AK1 chr7 6077055 - MAP2K5 chr15 68098984 + Exonic hg19 PRAD TCGA-V1-A8WV-01A 14 24 In-Frame Inter-chr p22.1 q23 STE:STE7 Seq+ 61906 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2AK1-PHF14 EIF2AK1 chr7 6094177 - PHF14 chr7 11091239 + Exonic hg19 SARC TCGA-JV-A75J-01A 18 17 Out-of-frame Intra-chr p22.1 p21.3 Seq+ 61907 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2AK2-CEBPZ EIF2AK2 chr2 37349649 - CEBPZ chr2 37429046 - Exonic hg19 BRCA TCGA-A2-A04P-01A 88 109 Out-of-frame Intra-chr p22.2 p22.2 Transcription factor Seq+ 61908 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2AK2-CEBPZ EIF2AK2 chr2 37362627 - CEBPZ chr2 37430151 - Exonic hg19 BLCA TCGA-FD-A3NA-01A 7 5 Out-of-frame Intra-chr p22.2 p22.2 Transcription factor Seq+ 61909 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2AK2-FAM82A1 EIF2AK2 chr2 37362627 - FAM82A1 chr2 38216684 + Exonic hg19 BRCA TCGA-D8-A142-01A 32 27 In-Frame Intra-chr p22.2 Seq+ 61910 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2AK3-NBAS EIF2AK3 chr2 88926485 - NBAS chr2 15564592 - Exonic hg19 SKCM TCGA-DA-A95Y-06A 43 48 In-Frame Intra-chr p11.2 p24.3 Seq+ 61911 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2AK4-ANKRD34C EIF2AK4 chr15 40241469 - ANKRD34C chr15 79585583 + Exonic hg19 HNSC TCGA-CR-5243-01A 17 10 CDS-5'UTR Intra-chr q15.1 q25.1 Seq+ 61912 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2AK4-AVEN EIF2AK4 chr15 40294989 - AVEN chr15 34160056 - Exonic hg19 LUAD TCGA-93-A4JQ-01A 2 1 Out-of-frame Intra-chr q15.1 q14 Seq+ 61913 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2B1-ACSS3 EIF2B1 chr12 124116892 - ACSS3 chr12 81627128 + Exonic hg19 STAD TCGA-BR-4366-01A 28 2 Out-of-frame Intra-chr q24.31 q21.31 61914 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2B2-YLPM1 EIF2B2 chr14 75473417 - YLPM1 chr14 75301968 + Exonic hg19 LIHC TCGA-DD-A11C-01A 3 2 In-Frame Intra-chr q24.3 q24.3 Seq+ 61915 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2B3-HYI EIF2B3 chr1 45392300 - HYI chr1 43917990 - Exonic hg19 BRCA TCGA-AR-A24L-01A 10 2 In-Frame Intra-chr p34.1 p34.2 Seq+ 61916 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2C2-CHRAC1 EIF2C2 chr8 141645584 - CHRAC1 chr8 141524468 + Exonic hg19 PAAD TCGA-IB-A6UF-01A 14 20 Out-of-frame Intra-chr q24.3 61917 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2C2-CNBD1 EIF2C2 chr8 141645584 - CNBD1 chr8 88218221 + Exonic hg19 LUAD TCGA-05-4402-01A 3 4 Out-of-frame Intra-chr q21.3 61918 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2C2-DNAH10 EIF2C2 chr8 141557567 - DNAH10 chr12 124377780 + Exonic hg19 LGG TCGA-TM-A7CF-01A 3 2 Out-of-frame Inter-chr 61919 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2C2-PCMTD1 EIF2C2 chr8 141595218 - PCMTD1 chr8 52746249 - Exonic hg19 BRCA TCGA-AC-A6IW-01A 8 9 In-Frame Intra-chr q11.23 61920 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2C2-PTK2 EIF2C2 chr8 141645584 - PTK2 chr8 141685598 - Exonic hg19 LUSC TCGA-60-2713-01A 16 51 Out-of-frame Intra-chr q24.3 61921 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2C2-PTK2 EIF2C2 chr8 141645584 - PTK2 chr8 141712806 - Exonic hg19 OV TCGA-61-2109-01A 4 4 Out-of-frame Intra-chr q24.3 61922 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2C2-PTK2 EIF2C2 chr8 141645584 - PTK2 chr8 141678523 - Exonic hg19 BRCA TCGA-C8-A26Y-01A 7 11 Out-of-frame Intra-chr q24.3 61923 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2C2-PTK2 EIF2C2 chr8 141645584 - PTK2 chr8 141874498 - Exonic hg19 BRCA TCGA-E2-A1II-01A 2 3 Out-of-frame Intra-chr q24.3 61924 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2C2-PTK2 EIF2C2 chr8 141645584 - PTK2 chr8 141696793 - Exonic hg19 BRCA TCGA-E2-A1LE-01A 7 8 Out-of-frame Intra-chr q24.3 61925 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2C3-PIK3CD EIF2C3 chr1 36479649 - PIK3CD chr1 9770482 + Exonic hg19 LUAD TCGA-L9-A5IP-01A 2 3 CDS-5'UTR Intra-chr p36.22 Oncogene 61926 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2S1-GPHN EIF2S1 chr14 67841264 - GPHN chr14 67291192 + Exonic hg19 BRCA TCGA-GM-A2DB-01A 5 2 In-Frame Intra-chr q23.3 q23.3 Seq+ 61927 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2S1-GPHN EIF2S1 chr14 67827173 - GPHN chr14 67576857 + Exonic hg19 ESCA TCGA-LN-A5U5-01A 80 80 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 61928 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2S2-ADRA1D EIF2S2 chr20 32678323 - ADRA1D chr20 4202777 - Exonic hg19 LUSC TCGA-LA-A7SW-01A 6 32 In-Frame Intra-chr q11.22 p13 Seq+ 61929 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF2S2-DEFB123 EIF2S2 chr20 32699902 - DEFB123 chr20 30037832 + Exonic hg19 BRCA TCGA-C8-A273-01A 10 175 Out-of-frame Intra-chr q11.22 q11.21 Seq+ 61930 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF3A-TBC1D1 EIF3A chr10 120809313 - TBC1D1 chr4 38091553 + Exonic hg19 HNSC TCGA-P3-A6T8-01A 3 8 Out-of-frame Inter-chr q26.11 p14 Seq+ 61931 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF3D-IQCE EIF3D chr22 36906902 - IQCE chr7 2641075 + Exonic hg19 SKCM TCGA-ER-A19H-06A 2 2 3'UTR-CDS Inter-chr q12.3 p22.3 61932 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF3D-PLEKHB2 EIF3D chr22 36906902 - PLEKHB2 chr2 131876464 + Exonic hg19 LUAD TCGA-78-7153-01A 2 5 Out-of-frame Inter-chr q12.3 q21.1 61933 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF3H-RAD21 EIF3H chr8 117738255 - RAD21 chr8 117870697 - Exonic hg19 LIHC TCGA-CC-A8HV-01A 2 3 Out-of-frame Intra-chr q24.11 q24.11 Seq+ 61934 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF3K-PPP2R2A EIF3K chr19 39116742 - PPP2R2A chr8 26227650 + Exonic hg19 LUSC TCGA-77-7338-01A 34 56 Out-of-frame Inter-chr p21.2 Seq+ 61935 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF3L-AK7 EIF3L chr22 38270531 - AK7 chr14 96922684 + Exonic hg19 LIHC TCGA-BC-A10R-01A 4 8 In-Frame Inter-chr q13.1 q32.2 Seq+ 61936 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF3L-ASCC2 EIF3L chr22 38251651 - ASCC2 chr22 30228331 - Exonic hg19 LUAD TCGA-44-A4SU-01A 4 2 CDS-5'UTR Intra-chr q13.1 q12.2 61937 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF3M-UEVLD EIF3M chr11 32617593 - UEVLD chr11 18591924 - Exonic hg19 SARC TCGA-DX-A1KU-01A 84 27 In-Frame Intra-chr p13 p15.1 Seq+ 61938 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4A1-PHOSPHO1 EIF4A1 chr17 7478576 - PHOSPHO1 chr17 47302366 - Exonic hg19 GBM TCGA-14-1034-01A 23 76 In-Frame Intra-chr p13.1 q21.32 Seq+ 61939 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4A1-PHOSPHO1 EIF4A1 chr17 7478576 - PHOSPHO1 chr17 47302493 - Exonic hg19 GBM TCGA-14-1034-02B 43 70 CDS-5'UTR Intra-chr p13.1 q21.32 Seq+ 61940 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4A2-KNG1 EIF4A2 chr3 186504062 - KNG1 chr3 186461494 + Exonic hg19 LIHC TCGA-BC-A10Y-01A 6635 3743 In-Frame Intra-chr q27.3 q27.3 Seq+ 61941 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4E2-DIS3L2 EIF4E2 chr2 233429061 - DIS3L2 chr2 233194523 + Exonic hg19 BRCA TCGA-E2-A1AZ-01A 2 2 Out-of-frame Intra-chr q37.1 q37.1 Seq+ 61942 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4EBP1-ADAM18 EIF4EBP1 chr8 37888236 - ADAM18 chr8 39564309 + Exonic hg19 SARC TCGA-LI-A67I-01A 2 2 Out-of-frame Intra-chr p11.23 Seq+ 61943 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4ENIF1-C22orf24 EIF4ENIF1 chr22 31867830 - C22orf24 chr22 32330435 - Exonic hg19 PRAD TCGA-XK-AAIV-01A 2 2 Out-of-frame Intra-chr q12.2 q12.3 Seq+ 61944 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4ENIF1-COMT EIF4ENIF1 chr22 31867830 - COMT chr22 19948722 + Exonic hg19 COAD TCGA-A6-5657-01A 35 30 CDS-5'UTR Intra-chr q12.2 q11.21 Seq+ 61945 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4ENIF1-SHANK3 EIF4ENIF1 chr22 31864161 - SHANK3 chr22 51153345 + Exonic hg19 BRCA TCGA-BH-A0H7-01A 26 11 In-Frame Intra-chr q12.2 61946 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4G1-AEBP1 EIF4G1 chr3 184045091 - AEBP1 chr7 44143960 + Exonic hg19 SKCM TCGA-BF-A3DJ-01A 2 1 CDS-5'UTR Inter-chr q27.1 p13 Transcription factor 61947 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4G1-ANKS1A EIF4G1 chr3 184053139 - ANKS1A chr6 34977682 + Exonic hg19 KIRP TCGA-BQ-5879-01A 2 6 Out-of-frame Inter-chr q27.1 p21.31 61948 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4G1-SNW1 EIF4G1 chr3 184053139 - SNW1 chr14 78189203 - Exonic hg19 LUAD TCGA-78-7158-01A 2 10 Out-of-frame Inter-chr q27.1 q24.3 61949 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4G2-ARFGEF2 EIF4G2 chr11 10818601 - ARFGEF2 chr20 47615777 + Exonic hg19 SKCM TCGA-GN-A26D-06A 2 3 Out-of-frame Inter-chr p15.4 q13.13 61950 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4G2-C5orf45 EIF4G2 chr11 10818600 - C5orf45 chr5 179280437 - Exonic hg19 LUAD TCGA-78-7163-01A 2 2 3'UTR-CDS Inter-chr p15.4 61951 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4G2-EIF2AK2 EIF4G2 chr11 10818601 - EIF2AK2 chr2 37342384 - Exonic hg19 THCA TCGA-CE-A483-01A 2 11 Out-of-frame Inter-chr p15.4 p22.2 61952 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4G2-ERBB3 EIF4G2 chr11 10818601 - ERBB3 chr12 56492035 + Exonic hg19 LGG TCGA-E1-5307-01A 2 2 Out-of-frame Inter-chr p15.4 q13.2 Oncogene 61953 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4G2-NUCB2 EIF4G2 chr11 10818600 - NUCB2 chr11 17297555 + Exonic hg19 THCA TCGA-EM-A2OZ-01A 2 1 Out-of-frame Intra-chr p15.4 p15.1 61954 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4G2-UTRN EIF4G2 chr11 10818601 - UTRN chr6 144665237 + Exonic hg19 LUSC TCGA-63-6202-01A 2 1 Out-of-frame Inter-chr p15.4 q24.2 61955 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4G2-ZNFX1 EIF4G2 chr11 10818601 - ZNFX1 chr20 47863418 - Exonic hg19 LUAD TCGA-75-6214-01A 2 11 Out-of-frame Inter-chr p15.4 q13.13 61956 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4G3-C1orf222 EIF4G3 chr1 21377359 - C1orf222 chr1 1878493 - Exonic hg19 READ TCGA-DC-5337-01A 12 5 Out-of-frame Intra-chr p36.12 Seq+ 61957 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4G3-C7orf50 EIF4G3 chr1 21377359 - C7orf50 chr7 1049779 - Exonic hg19 STAD TCGA-HU-A4HD-01A 8 49 5'UTR-CDS Inter-chr p36.12 p22.3 Seq+ 61958 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4G3-ECE1 EIF4G3 chr1 21377359 - ECE1 chr1 21586885 - Exonic hg19 LUSC TCGA-85-8580-01A 13 7 5'UTR-CDS Intra-chr p36.12 p36.12 Seq+ 61959 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4G3-ECE1 EIF4G3 chr1 21415631 - ECE1 chr1 21573856 - Exonic hg19 LUAD TCGA-91-8499-01A 32 20 5'UTR-CDS Intra-chr p36.12 p36.12 Seq+ 61960 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4G3-ECE1 EIF4G3 chr1 21377359 - ECE1 chr1 21616649 - Exonic hg19 LGG TCGA-E1-5304-01A 2 2 5'UTR-CDS Intra-chr p36.12 p36.12 Seq+ 61961 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4G3-ECE1 EIF4G3 chr1 21377359 - ECE1 chr1 21616649 - Exonic hg19 UCS TCGA-NA-A4R1-01A 52 33 5'UTR-CDS Intra-chr p36.12 p36.12 Seq+ 61962 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4G3-LAMC1 EIF4G3 chr1 21377359 - LAMC1 chr1 183085712 + Exonic hg19 UCS TCGA-N9-A4PZ-01A 41 16 5'UTR-CDS Intra-chr p36.12 q25.3 Seq+ 61963 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4G3-LIN28A EIF4G3 chr1 21267984 - LIN28A chr1 26737877 + Exonic hg19 HNSC TCGA-DQ-7591-01A 3 1 In-Frame Intra-chr p36.12 p36.11 Transcription factor 61964 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4G3-NSUN4 EIF4G3 chr1 21415631 - NSUN4 chr1 46818540 + Exonic hg19 LUAD TCGA-78-7153-01A 2 3 5'UTR-5'UTR Intra-chr p36.12 p33 Seq+ 61965 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4G3-PPP2R3A EIF4G3 chr1 21503215 - PPP2R3A chr3 135806725 + Exonic hg19 BRCA TCGA-E2-A158-01A 10 3 5'UTR-CDS Inter-chr p36.12 q22.2 Seq+ 61966 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4G3-RAP1GAP EIF4G3 chr1 21329206 - RAP1GAP chr1 21945565 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 24 19 In-Frame Intra-chr p36.12 p36.12 Tumor suppressor gene Seq+ 61967 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4H-AARS2 EIF4H chr7 73588772 - AARS2 chr6 44280000 - Exonic hg19 ACC TCGA-OR-A5J8-01A 140 172 Out-of-frame Inter-chr q11.23 p21.1 Seq+ 61968 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF4H-ELN EIF4H chr7 73604636 - ELN chr7 73449694 + Exonic hg19 LUAD TCGA-38-4630-01A 68 166 In-Frame Intra-chr q11.23 q11.23 Seq+ 61969 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF5-NOTCH2 EIF5 chr14 103800934 - NOTCH2 chr1 120465069 - Exonic hg19 KIRP TCGA-MH-A855-01A 7 10 5'UTR-CDS Inter-chr q32.32 p12 Oncogene Tumor suppressor gene Seq+ 61970 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EIF5B-LYG1 EIF5B chr2 99954052 - LYG1 chr2 99912165 - Exonic hg19 CESC TCGA-EA-A1QS-01A 8 6 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 61971 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELAC1-MRO ELAC1 chr18 48510933 - MRO chr18 48335774 - Exonic hg19 STAD TCGA-BR-4371-01A 2 3 CDS-5'UTR Intra-chr q21.2 q21.2 61972 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELAC2-COX10 ELAC2 chr17 12919085 - COX10 chr17 14063194 + Exonic hg19 PRAD TCGA-HC-7213-01A 19 30 In-Frame Intra-chr p12 p12 Seq+ 61973 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELAC2-RABEP1 ELAC2 chr17 12909238 - RABEP1 chr17 5211989 + Exonic hg19 CHOL TCGA-W5-AA31-01A 11 10 Out-of-frame Intra-chr p12 p13.2 Seq+ 61974 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELAVL1-AC011498.1 ELAVL1 chr19 8056528 - AC011498.1 chr19 4475272 + Exonic hg19 BRCA TCGA-A2-A0D4-01A 24 9 Out-of-frame Intra-chr p13.2 p13.3 61975 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELAVL2-CFTR ELAVL2 chr9 23821603 - CFTR chr7 117304742 + Exonic hg19 PRAD TCGA-YL-A8HM-01A 15 12 5'UTR-CDS Inter-chr p21.3 q31.2 Tumor suppressor gene Seq+ 61976 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELF1-DCLK1 ELF1 chr13 41593364 - DCLK1 chr13 36700293 - Exonic hg19 STAD TCGA-D7-8576-01A 6 17 5'UTR-5'UTR Intra-chr q14.11 Transcription factor q13.3 CAMK:DCAMKL Seq+ 61977 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELF1-KIAA0564 ELF1 chr13 41556119 - KIAA0564 chr13 42465723 - Exonic hg19 BLCA TCGA-4Z-AA80-01A 6 5 In-Frame Intra-chr q14.11 Transcription factor 61978 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELF1-RNF144A ELF1 chr13 41634974 - RNF144A chr2 7081079 + Exonic hg19 KIRP TCGA-5P-A9K9-01A 3 1 5'UTR-5'UTR Inter-chr q14.11 Transcription factor p25.1 Tumor suppressor gene 61979 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELF1-UBL3 ELF1 chr13 41634974 - UBL3 chr13 30351400 - Exonic hg19 BLCA TCGA-DK-AA6P-01A 21 29 5'UTR-CDS Intra-chr q14.11 Transcription factor q12.3 Seq+ 61980 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELF2-ICA1L ELF2 chr4 139981478 - ICA1L chr2 203693739 - Exonic hg19 LUSC TCGA-56-7579-01A 11 2 CDS-5'UTR Inter-chr q31.1 Transcription factor q33.2 Seq+ 61981 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELF3-DDX21 ELF3 chr1 201985131 - DDX21 chr10 70723858 + Exonic hg19 STAD TCGA-BR-8590-01A 2 7 Out-of-frame Inter-chr q32.1 Transcription factor q22.1 61982 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELF5-CAT ELF5 chr11 34515026 - CAT chr11 34485652 + Exonic hg19 BRCA TCGA-B6-A0I1-01A 13 11 In-Frame Intra-chr p13 Transcription factor p13 Tumor suppressor gene Seq+ 61983 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELK1-PCBP3 ELK1 chrX 47509822 - PCBP3 chr21 47269875 + Exonic hg19 UCS TCGA-ND-A4W6-01A 2 2 5'UTR-5'UTR Inter-chr p11.23 Transcription factor q22.3 Seq+ 61984 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELK3-AMDHD1 ELK3 chr12 96617551 - AMDHD1 chr12 96346495 + Exonic hg19 BRCA TCGA-AR-A251-01A 16 16 Out-of-frame Intra-chr q23.1 Transcription factor q23.1 Seq+ 61985 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELK3-CDK17 ELK3 chr12 96617551 - CDK17 chr12 96694138 - Exonic hg19 SARC TCGA-DX-A2J0-01A 10 8 In-Frame Intra-chr q23.1 Transcription factor q23.1 Seq+ 61986 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELK3-DDIT4L ELK3 chr12 96617551 - DDIT4L chr4 101111189 - Exonic hg19 LIHC TCGA-ED-A82E-01A 3 2 CDS-5'UTR Inter-chr q23.1 Transcription factor q24 Seq+ 61987 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELK3-KRT78 ELK3 chr12 96617551 - KRT78 chr12 53242405 - Exonic hg19 SARC TCGA-DX-A1KW-01A 84 56 Out-of-frame Intra-chr q23.1 Transcription factor q13.13 Seq+ 61988 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELK3-LIN7A ELK3 chr12 96617551 - LIN7A chr12 81242101 - Exonic hg19 SARC TCGA-3B-A9HO-01A 2 1 In-Frame Intra-chr q23.1 Transcription factor q21.31 61989 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELK3-PTPRR ELK3 chr12 96588483 - PTPRR chr12 71033057 - Exonic hg19 SARC TCGA-DX-AB2F-01A 15 20 5'UTR-CDS Intra-chr q23.1 Transcription factor q15 61990 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELK3-SBNO1 ELK3 chr12 96588483 - SBNO1 chr12 123834988 - Exonic hg19 SARC TCGA-DX-A3LS-01A 43 14 5'UTR-5'UTR Intra-chr q23.1 Transcription factor q24.31 Seq+ 61991 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELK3-TSPAN8 ELK3 chr12 96588483 - TSPAN8 chr12 71676599 - Exonic hg19 SARC TCGA-DX-AB2F-01A 1267 729 Out-of-frame Intra-chr q23.1 Transcription factor q21.1 Seq+ 61992 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELK4-SLC26A9 ELK4 chr1 205592804 - SLC26A9 chr1 205904966 - Exonic hg19 PRAD TCGA-HC-8265-01B 8 11 CDS-5'UTR Intra-chr q32.1 Transcription factor q32.1 Seq+ 61993 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELK4-VCL ELK4 chr1 205592804 - VCL chr10 75855414 + Exonic hg19 PRAD TCGA-ZG-A9LY-01A 4 10 Out-of-frame Inter-chr q32.1 Transcription factor q22.2 Seq+ 61994 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELK4-ZNF350 ELK4 chr1 205588085 - ZNF350 chr19 52477784 - Exonic hg19 PRAD TCGA-EJ-A7NN-01A 8 5 CDS-5'UTR Inter-chr q32.1 Transcription factor q13.41 Transcription factor Seq+ 61995 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELL-ARL4D ELL chr19 18632731 - ARL4D chr17 41477029 + Exonic hg19 UCS TCGA-N5-A4RM-01A 5 8 CDS-5'UTR Inter-chr p13.11 q21.31 Seq+ 61996 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELL-C19orf42 ELL chr19 18632731 - C19orf42 chr19 16758072 - Exonic hg19 BRCA TCGA-A2-A04U-01A 61 57 Out-of-frame Intra-chr p13.11 Seq+ 61997 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELL-CISD3 ELL chr19 18576222 - CISD3 chr17 36887013 + Exonic hg19 KIRC TCGA-B0-4945-01A 85 21 Out-of-frame Inter-chr p13.11 Seq+ 61998 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELL-CRLF1 ELL chr19 18632731 - CRLF1 chr19 18710656 - Exonic hg19 LUSC TCGA-60-2706-01A 38 12 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 61999 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELL-FAM125A ELL chr19 18632731 - FAM125A chr19 17516886 + Exonic hg19 LUAD TCGA-49-4490-01A 5 2 CDS-5'UTR Intra-chr p13.11 62000 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELL-FKBP8 ELL chr19 18632731 - FKBP8 chr19 18652805 - Exonic hg19 LIHC TCGA-DD-AAE2-01A 350 179 CDS-5'UTR Intra-chr p13.11 p13.11 Seq+ 62001 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELL-FKBP8 ELL chr19 18583645 - FKBP8 chr19 18644157 - Exonic hg19 THYM TCGA-ZB-A96I-01A 2 8 In-Frame Intra-chr p13.11 p13.11 Seq+ 62002 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELL-INSR ELL chr19 18632731 - INSR chr19 7267907 - Exonic hg19 BRCA TCGA-AC-A7VB-01A 26 9 Out-of-frame Intra-chr p13.11 p13.2 TK:InsR Seq+ 62003 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELL-LDLRAD1 ELL chr19 18572388 - LDLRAD1 chr1 54476083 - Exonic hg19 LUSC TCGA-85-A53L-01A 24 10 Out-of-frame Inter-chr p13.11 p32.3 Seq+ 62004 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELL-MKNK2 ELL chr19 18569015 - MKNK2 chr19 2046690 - Exonic hg19 ESCA TCGA-L5-A891-01A 2 7 Out-of-frame Intra-chr p13.11 p13.3 Seq+ 62005 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELL-RABGGTA ELL chr19 18557558 - RABGGTA chr14 24740375 - Exonic hg19 THYM TCGA-4V-A9QJ-01A 6 2 CDS-5'UTR Inter-chr p13.11 q12 Seq+ 62006 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELL2-CAST ELL2 chr5 95278706 - CAST chr5 96011243 + Exonic hg19 COAD TCGA-DM-A1D8-01A 4 3 In-Frame Intra-chr q15 q15 Seq+ 62007 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELMO1-HDAC9 ELMO1 chr7 37488278 - HDAC9 chr7 18535885 + Exonic hg19 UCEC TCGA-EO-A3AS-01A 11 7 5'UTR-5'UTR Intra-chr p14.1 p21.1 Seq+ 62008 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELMO1-SCIN ELMO1 chr7 37136224 - SCIN chr7 12684209 + Exonic hg19 LUSC TCGA-77-6842-01A 112 35 In-Frame Intra-chr p14.1 p21.3 Seq+ 62009 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELMO2-MYBL2 ELMO2 chr20 45023044 - MYBL2 chr20 42310424 + Exonic hg19 MESO TCGA-TS-A7P7-01A 7 1 In-Frame Intra-chr q13.12 q13.12 Transcription factor Seq+ 62010 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELMO2-STAP1 ELMO2 chr20 45008892 - STAP1 chr4 68441103 + Exonic hg19 BRCA TCGA-AR-A1AN-01A 44 15 In-Frame Inter-chr q13.12 q13.2 Seq+ 62011 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELMOD3-TCF7L1 ELMOD3 chr2 85589383 - TCF7L1 chr2 85536152 + Exonic hg19 BRCA TCGA-A2-A4S3-01A 7 5 Out-of-frame Intra-chr p11.2 p11.2 Oncogene Transcription factor Seq+ 62012 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELMOD3-TTC27 ELMOD3 chr2 85589383 - TTC27 chr2 32927874 + Exonic hg19 BRCA TCGA-AN-A0XU-01A 2 4 In-Frame Intra-chr p11.2 p22.3 Seq+ 62013 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELN-FADS2 ELN chr7 73484007 - FADS2 chr11 61588853 + Exonic hg19 BRCA TCGA-D8-A1XQ-01A 2 1 Out-of-frame Inter-chr q11.23 q12.2 62014 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELN-IQCE ELN chr7 73484007 - IQCE chr7 2641075 + Exonic hg19 TGCT TCGA-XE-AANI-01A 2 17 3'UTR-CDS Intra-chr q11.23 p22.3 62015 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELN-METTL2B ELN chr7 73442599 - METTL2B chr7 128133858 + Exonic hg19 BRCA TCGA-AO-A0J3-01A 6 3 Out-of-frame Intra-chr q11.23 q32.1 Seq+ 62016 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELOF1-RDH8 ELOF1 chr19 11670006 - RDH8 chr19 10127733 + Exonic hg19 KIRC TCGA-B0-5084-01A 6 126 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 62017 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELOVL2-SMOC2 ELOVL2 chr6 11044461 - SMOC2 chr6 169051361 + Exonic hg19 UCEC TCGA-AJ-A3IA-01A 4 2 Out-of-frame Intra-chr p24.2 q27 Seq+ 62018 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELOVL5-FAR1 ELOVL5 chr6 53132203 - FAR1 chr11 13744912 + Exonic hg19 BRCA TCGA-AR-A2LE-01A 2 15 Out-of-frame Inter-chr p12.1 p15.3 62019 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELOVL5-HMGCLL1 ELOVL5 chr6 53213615 - HMGCLL1 chr6 55378994 - Exonic hg19 SKCM TCGA-FS-A1ZN-01A 3 4 5'UTR-CDS Intra-chr p12.1 p12.1 Seq+ 62020 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELOVL5-PFKFB3 ELOVL5 chr6 53213615 - PFKFB3 chr10 6255586 + Exonic hg19 KIRP TCGA-UZ-A9PQ-01A 24 6 5'UTR-CDS Inter-chr p12.1 p15.1 Seq+ 62021 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELOVL5-SLC25A27 ELOVL5 chr6 53213615 - SLC25A27 chr6 46649264 + Exonic hg19 LUSC TCGA-33-4589-01A 6 1 5'UTR-3'UTR Intra-chr p12.1 p12.3 62022 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELOVL6-RP11-380D23.1 ELOVL6 chr4 111026653 - RP11-380D23.1 chr4 111434695 - Exonic hg19 UCS TCGA-N6-A4VG-01A 35 16 Out-of-frame Intra-chr q25 62023 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELP2-GALNT1 ELP2 chr18 33713279 - GALNT1 chr18 33234524 + Exonic hg19 BRCA TCGA-AR-A1AI-01A 16 19 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 62024 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELP2-MAPRE2 ELP2 chr18 33734962 - MAPRE2 chr18 32681910 + Exonic hg19 BRCA TCGA-A2-A0D2-01A 127 175 In-Frame Intra-chr q12.2 q12.1 Seq+ 62025 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELP2-RPRD1A ELP2 chr18 33736617 - RPRD1A chr18 33573263 - Exonic hg19 STAD TCGA-KB-A6F7-01A 7 13 In-Frame Intra-chr q12.2 q12.2 Seq+ 62026 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELP4-CFTR ELP4 chr11 31616448 - CFTR chr7 117170953 + Exonic hg19 BRCA TCGA-AC-A2QH-01A 4 5 In-Frame Inter-chr p13 q31.2 Tumor suppressor gene 62027 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ELP4-FREM1 ELP4 chr11 31625454 - FREM1 chr9 14816869 - Exonic hg19 CHOL TCGA-ZU-A8S4-01A 2 1 In-Frame Inter-chr p13 p22.3 62028 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EMID1-CBY1 EMID1 chr22 29630338 - CBY1 chr22 39069164 + Exonic hg19 OV TCGA-04-1341-01A 43 63 In-Frame Intra-chr q12.2 q13.1 Seq+ 62029 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EMID1-KREMEN1 EMID1 chr22 29611619 - KREMEN1 chr22 29490246 + Exonic hg19 UCS TCGA-N8-A56S-01A 5 6 In-Frame Intra-chr q12.2 q12.1 Seq+ 62030 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EMID2-BET1 EMID2 chr7 101006471 - BET1 chr7 93623697 - Exonic hg19 LUAD TCGA-69-8255-01A 4 6 Out-of-frame Intra-chr q21.3 62031 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EMILIN2-SMCHD1 EMILIN2 chr18 2909817 - SMCHD1 chr18 2802526 + Exonic hg19 PAAD TCGA-IB-7654-01A 3 5 Out-of-frame Intra-chr p11.32 p11.32 Tumor suppressor gene Seq+ 62032 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EML1-ADAMDEC1 EML1 chr14 100259880 - ADAMDEC1 chr8 24249775 + Exonic hg19 LUSC TCGA-63-A5ML-01A 5 3 In-Frame Inter-chr q32.2 p21.2 Seq+ 62033 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EML1-BASP1 EML1 chr14 100317372 - BASP1 chr5 17275317 + Exonic hg19 SARC TCGA-DX-A1L0-01A 6 2 CDS-5'UTR Inter-chr q32.2 p15.1 Tumor suppressor gene Seq+ 62034 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EML1-CCNK EML1 chr14 100259880 - CCNK chr14 99958963 + Exonic hg19 BRCA TCGA-B6-A0I1-01A 3 3 CDS-5'UTR Intra-chr q32.2 q32.2 Seq+ 62035 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EML1-CCNK EML1 chr14 100367376 - CCNK chr14 99973413 + Exonic hg19 UCS TCGA-N6-A4VE-01A 19 12 Out-of-frame Intra-chr q32.2 q32.2 Seq+ 62036 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EML1-FBLN5 EML1 chr14 100259880 - FBLN5 chr14 92409305 - Exonic hg19 LGG TCGA-CS-4943-01A 3 1 Out-of-frame Intra-chr q32.2 q32.12 62037 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EML1-GPI EML1 chr14 100259880 - GPI chr19 34884153 + Exonic hg19 SARC TCGA-RN-AAAQ-01A 9 10 Out-of-frame Inter-chr q32.2 Seq+ 62038 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EML1-SPATA7 EML1 chr14 100317372 - SPATA7 chr14 88857725 + Exonic hg19 BLCA TCGA-E7-A85H-01A 2 2 In-Frame Intra-chr q32.2 q31.3 62039 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EML1-TTLL5 EML1 chr14 100259880 - TTLL5 chr14 76349028 + Exonic hg19 LUSC TCGA-77-A5G6-01A 8 14 Out-of-frame Intra-chr q32.2 q24.3 Seq+ 62040 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EML2-DMWD EML2 chr19 46120888 - DMWD chr19 46290129 - Exonic hg19 LUAD TCGA-55-A48Y-01A 4 1 Out-of-frame Intra-chr q13.32 q13.32 Seq+ 62041 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EML3-ATL3 EML3 chr11 62371201 - ATL3 chr11 63400569 - Exonic hg19 UCEC TCGA-A5-A2K2-01A 4 1 Out-of-frame Intra-chr q12.3 q13.1 Seq+ 62042 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EML3-INTS5 EML3 chr11 62372585 - INTS5 chr11 62417471 - Exonic hg19 MESO TCGA-TS-A7P0-01A 7 6 In-Frame Intra-chr q12.3 q12.3 Seq+ 62043 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EML4-ALK EML4 chr2 42472827 - ALK chr2 29446394 - Exonic hg19 KIRP TCGA-2Z-A9JJ-01A 28 11 In-Frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 62044 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EML4-ALK EML4 chr2 42492091 - ALK chr2 29446394 - Exonic hg19 LUAD TCGA-50-8460-01A 13 11 Out-of-frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 62045 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EML4-ALK EML4 chr2 42491871 - ALK chr2 29446394 - Exonic hg19 LUAD TCGA-67-6215-01A 31 37 In-Frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 62046 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EML4-ALK EML4 chr2 42492091 - ALK chr2 29446394 - Exonic hg19 LUAD TCGA-67-6216-01A 10 9 Out-of-frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 62047 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EML4-ALK EML4 chr2 42522656 - ALK chr2 29446394 - Exonic hg19 LUAD TCGA-78-7163-01A 51 51 In-Frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 62048 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EML4-ALK EML4 chr2 42552694 - ALK chr2 29446394 - Exonic hg19 LUAD TCGA-86-A4P8-01A 2 3 In-Frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 62049 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EML4-ALK EML4 chr2 42492091 - ALK chr2 29449940 - Exonic hg19 THCA TCGA-E8-A432-01A 57 29 Out-of-frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 62050 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EML4-CASK EML4 chr2 42396776 - CASK chrX 41420897 - Exonic hg19 GBM TCGA-06-0158-01A 11 55 In-Frame Inter-chr p21 Oncogene p11.4 CAMK:CASK Seq+ 62051 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EML4-COX7A2L EML4 chr2 42531691 - COX7A2L chr2 42561009 - Exonic hg19 LUSC TCGA-77-8143-01A 41 15 Out-of-frame Intra-chr p21 Oncogene p21 Seq+ 62052 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EML4-COX7A2L EML4 chr2 42396776 - COX7A2L chr2 42580483 - Exonic hg19 BRCA TCGA-E9-A245-01A 6 4 Out-of-frame Intra-chr p21 Oncogene p21 Seq+ 62053 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EML4-NTRK3 EML4 chr2 42491871 - NTRK3 chr15 88576276 - Exonic hg19 PAAD TCGA-FB-AAPP-01A 20 10 In-Frame Inter-chr p21 Oncogene q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 62054 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EML4-PKDCC EML4 chr2 42553392 - PKDCC chr2 42280379 + Exonic hg19 UCEC TCGA-5B-A90C-01A 4 5 Out-of-frame Intra-chr p21 Oncogene p21 Seq+ 62055 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EML4-PKDCC EML4 chr2 42396776 - PKDCC chr2 42280379 + Exonic hg19 PCPG TCGA-RW-A8AZ-01A 4 4 Out-of-frame Intra-chr p21 Oncogene p21 Seq+ 62056 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EML4-VPS54 EML4 chr2 42531691 - VPS54 chr2 64120669 - Exonic hg19 LIHC TCGA-BC-A69I-01A 2 2 In-Frame Intra-chr p21 Oncogene p14 62057 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EML6-SPTBN1 EML6 chr2 54952395 - SPTBN1 chr2 54893052 + Exonic hg19 PCPG TCGA-SR-A6MY-01A 32 28 In-Frame Intra-chr p16.1 p16.2 Tumor suppressor gene Seq+ 62058 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EMP1-ETV6 EMP1 chr12 13349806 - ETV6 chr12 12043875 + Exonic hg19 BRCA TCGA-GI-A2C9-01A 10 5 5'UTR-CDS Intra-chr p13.1 Tumor suppressor gene p13.2 Tumor suppressor gene Transcription factor Seq+ 62059 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EMP2-SNN EMP2 chr16 10641397 - SNN chr16 11769831 + Exonic hg19 CESC TCGA-DG-A2KH-01A 92 68 CDS-5'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 62060 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENAH-AEBP2 ENAH chr1 225840388 - AEBP2 chr12 19615444 + Exonic hg19 LUSC TCGA-39-5029-01A 11 5 In-Frame Inter-chr q42.12 p12.3 Transcription factor Seq+ 62061 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENAH-LIN9 ENAH chr1 225840388 - LIN9 chr1 226438620 - Exonic hg19 SKCM TCGA-FR-A7U8-06A 20 7 Out-of-frame Intra-chr q42.12 q42.12 Tumor suppressor gene Seq+ 62062 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENAH-SCCPDH ENAH chr1 225840388 - SCCPDH chr1 246907378 + Exonic hg19 SKCM TCGA-W3-A824-06A 48 32 Out-of-frame Intra-chr q42.12 q44 Seq+ 62063 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENAH-UCHL5 ENAH chr1 225840388 - UCHL5 chr1 193020947 - Exonic hg19 BLCA TCGA-CU-A5W6-01A 5 10 Out-of-frame Intra-chr q42.12 q31.2 Seq+ 62064 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENDOD1-BBS1 ENDOD1 chr11 94823391 - BBS1 chr11 66288741 + Exonic hg19 UCEC TCGA-AJ-A3IA-01A 3 3 In-Frame Intra-chr q21 q13.2 Seq+ 62065 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENDOD1-RAB30 ENDOD1 chr11 94823391 - RAB30 chr11 82705164 - Exonic hg19 SKCM TCGA-GN-A26D-06A 21 40 In-Frame Intra-chr q21 q14.1 Seq+ 62066 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENDOV-IKZF3 ENDOV chr17 78403631 - IKZF3 chr17 37922746 - Exonic hg19 BRCA TCGA-A2-A0T1-01A 4 1 In-Frame Intra-chr q25.3 q21.1 Tumor suppressor gene Transcription factor Seq+ 62067 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENDOV-SLC26A11 ENDOV chr17 78389621 - SLC26A11 chr17 78210727 + Exonic hg19 BRCA TCGA-C8-A135-01A 11 7 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 62068 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENDOV-TMEM104 ENDOV chr17 78397432 - TMEM104 chr17 72832066 + Exonic hg19 KIRC TCGA-BP-4983-01A 9 14 Out-of-frame Intra-chr q25.3 q25.1 Seq+ 62069 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENG-AK1 ENG chr9 130605373 - AK1 chr9 130630791 - Exonic hg19 BRCA TCGA-B6-A0I6-01A 45 28 In-Frame Intra-chr q34.11 q34.11 Seq+ 62070 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENGASE-RBFOX3 ENGASE chr17 77081816 - RBFOX3 chr17 77086967 - Exonic hg19 LUSC TCGA-85-8287-01A 8 2 In-Frame Intra-chr q25.3 q25.3 Seq+ 62071 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENO1-DDX27 ENO1 chr1 8921061 - DDX27 chr20 47849303 + Exonic hg19 HNSC TCGA-CR-6488-01A 2 1 Out-of-frame Inter-chr p36.23 q13.13 62072 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENO1-RFWD2 ENO1 chr1 8921061 - RFWD2 chr1 176129420 - Exonic hg19 KIRP TCGA-B9-5156-01A 2 7 Out-of-frame Intra-chr p36.23 q25.2 Tumor suppressor gene 62073 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENO1-SIAE ENO1 chr1 8921061 - SIAE chr11 124543777 - Exonic hg19 STAD TCGA-BR-8486-01A 2 1 3'UTR-5'UTR Inter-chr p36.23 q24.2 62074 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENO1-SNW1 ENO1 chr1 8921061 - SNW1 chr14 78189203 - Exonic hg19 LUAD TCGA-78-7149-01A 2 13 Out-of-frame Inter-chr p36.23 q24.3 62075 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENO1-SNW1 ENO1 chr1 8921061 - SNW1 chr14 78189203 - Exonic hg19 KIRP TCGA-BQ-7061-01A 3 1 Out-of-frame Inter-chr p36.23 q24.3 62076 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENO1-UTRN ENO1 chr1 8921061 - UTRN chr6 144665237 + Exonic hg19 LUAD TCGA-50-6673-01A 2 2 Out-of-frame Inter-chr p36.23 q24.2 62077 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENO1-UVRAG ENO1 chr1 8921061 - UVRAG chr11 75694431 + Exonic hg19 LUSC TCGA-77-8009-01A 2 9 3'UTR-CDS Inter-chr p36.23 q13.5 Tumor suppressor gene 62078 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENOSF1-PPT1 ENOSF1 chr18 706470 - PPT1 chr1 40558179 - Exonic hg19 SARC TCGA-X6-A8C3-01A 74 40 In-Frame Inter-chr p11.32 p34.2 Seq+ 62079 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENOX2-OSBPL5 ENOX2 chrX 129761932 - OSBPL5 chr11 3150399 - Exonic hg19 BRCA TCGA-A8-A08G-01A 15 10 CDS-5'UTR Inter-chr q26.1 p15.4 Seq+ 62080 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENOX2-SMARCA1 ENOX2 chrX 129837094 - SMARCA1 chrX 128605303 - Exonic hg19 PRAD TCGA-HC-7736-01A 2 3 Out-of-frame Intra-chr q26.1 q26.1 Seq+ 62081 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENPP1-CDX1 ENPP1 chr6 132181646 - CDX1 chr5 149562331 + Exonic hg19 LIHC TCGA-RC-A6M5-01A 78 65 Out-of-frame Inter-chr q23.2 q32 Transcription factor Seq+ 62082 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENPP1-INSR ENPP1 chr6 132129415 - INSR chr19 7152938 - Exonic hg19 SARC TCGA-3B-A9HS-01A 5 4 Out-of-frame Inter-chr q23.2 p13.2 TK:InsR 62083 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENPP1-RIPPLY2 ENPP1 chr6 132129415 - RIPPLY2 chr6 84563816 + Exonic hg19 BRCA TCGA-OL-A6VO-01A 2 1 In-Frame Intra-chr q23.2 q14.2 Seq+ 62084 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENSA-KLHDC9 ENSA chr1 150598118 - KLHDC9 chr1 161069851 + Exonic hg19 UCS TCGA-N8-A4PP-01A 15 25 Out-of-frame Intra-chr q21.3 q23.3 Seq+ 62085 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENTHD1-RNF212 ENTHD1 chr22 40257770 - RNF212 chr4 1067450 - Exonic hg19 SKCM TCGA-EE-A2ME-06A 3 2 Out-of-frame Inter-chr q13.1 p16.3 Seq+ 62086 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENTPD5-MICU1 ENTPD5 chr14 74436713 - MICU1 chr10 74311099 - Exonic hg19 LIHC TCGA-DD-A4NN-01A 90 35 In-Frame Inter-chr q24.3 q22.1 Seq+ 62087 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENTPD5-OLFM2 ENTPD5 chr14 74453517 - OLFM2 chr19 9971470 - Exonic hg19 SKCM TCGA-FS-A1ZP-06A 2 2 In-Frame Inter-chr q24.3 p13.2 62088 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENTPD5-TSHR ENTPD5 chr14 74453517 - TSHR chr14 81558875 + Exonic hg19 SARC TCGA-DX-A48N-01A 2 5 Out-of-frame Intra-chr q24.3 q31.1 Oncogene Seq+ 62089 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ENTPD7-IDE ENTPD7 chr10 101439632 - IDE chr10 94250352 - Exonic hg19 GBM TCGA-06-2563-01A 8 6 In-Frame Intra-chr q24.2 q23.33 Seq+ 62090 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EP300-BCOR EP300 chr22 41572532 - BCOR chrX 39930412 - Exonic hg19 LGG TCGA-DU-6404-01A 186 8 In-Frame Inter-chr q13.2 Oncogene p11.4 Oncogene Seq+ 62091 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EP300-BCOR EP300 chr22 41572532 - BCOR chrX 39930412 - Exonic hg19 LGG TCGA-DU-6404-02B 218 21 In-Frame Inter-chr q13.2 Oncogene p11.4 Oncogene Seq+ 62092 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EP300-FAM55B EP300 chr22 41546202 - FAM55B chr11 114568767 + Exonic hg19 PRAD TCGA-HC-7077-01A 18 13 In-Frame Inter-chr q13.2 Oncogene 62093 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EP300-FBLN1 EP300 chr22 41551117 - FBLN1 chr22 45996187 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 30 18 Out-of-frame Intra-chr q13.2 Oncogene q13.31 Tumor suppressor gene Seq+ 62094 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EP300-HAUS8 EP300 chr22 41513825 - HAUS8 chr19 17166812 - Exonic hg19 BLCA TCGA-4Z-AA84-01A 37 13 In-Frame Inter-chr q13.2 Oncogene p13.11 Seq+ 62095 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EP300-IPO5 EP300 chr22 41489102 - IPO5 chr13 98634757 + Exonic hg19 BRCA TCGA-GI-A2C9-01A 5 6 Out-of-frame Inter-chr q13.2 Oncogene q32.2 Seq+ 62096 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EP300-MCHR1 EP300 chr22 41489102 - MCHR1 chr22 41076953 + Exonic hg19 BLCA TCGA-BT-A0S7-01A 61 36 In-Frame Intra-chr q13.2 Oncogene q13.2 Seq+ 62097 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EP300-PAICS EP300 chr22 41513825 - PAICS chr4 57325538 + Exonic hg19 UCEC TCGA-AX-A3G4-01A 20 15 Out-of-frame Inter-chr q13.2 Oncogene q12 Seq+ 62098 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EP300-RBX1 EP300 chr22 41551117 - RBX1 chr22 41363803 + Exonic hg19 LIHC TCGA-DD-A73F-01A 134 7 In-Frame Intra-chr q13.2 Oncogene q13.2 Seq+ 62099 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EP300-TNRC6B EP300 chr22 41489102 - TNRC6B chr22 40642019 + Exonic hg19 STAD TCGA-CD-A486-01A 12 104 Out-of-frame Intra-chr q13.2 Oncogene q13.1 Seq+ 62100 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EP300-TNRC6B EP300 chr22 41546202 - TNRC6B chr22 40681649 + Exonic hg19 LGG TCGA-HT-7480-01A 6 4 In-Frame Intra-chr q13.2 Oncogene q13.1 Seq+ 62101 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EP300-TTC28 EP300 chr22 41523752 - TTC28 chr22 28702631 - Exonic hg19 LUSC TCGA-34-5929-01A 2 1 Out-of-frame Intra-chr q13.2 Oncogene q12.1 62102 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EP300-XPNPEP3 EP300 chr22 41551117 - XPNPEP3 chr22 41363803 + Exonic hg19 LIHC TCGA-DD-A73F-01A 115 27 Out-of-frame Intra-chr q13.2 Oncogene q13.2 62103 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EP400-DPYSL5 EP400 chr12 132479501 - DPYSL5 chr2 27121364 + Exonic hg19 PCPG TCGA-WB-A81W-01A 5 1 CDS-5'UTR Inter-chr q24.33 Oncogene p23.3 Seq+ 62104 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EP400-SDHC EP400 chr12 132434581 - SDHC chr1 161293404 + Exonic hg19 LIHC TCGA-BW-A5NO-01A 2 4 5'UTR-CDS Inter-chr q24.33 Oncogene q23.3 Oncogene Seq+ 62105 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EP400-SFSWAP EP400 chr12 132535200 - SFSWAP chr12 132249001 + Exonic hg19 LUAD TCGA-05-4384-01A 6 4 Out-of-frame Intra-chr q24.33 Oncogene q24.33 Seq+ 62106 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EP400-SFSWAP EP400 chr12 132446499 - SFSWAP chr12 132237668 + Exonic hg19 BRCA TCGA-A2-A0D0-01A 3 2 Out-of-frame Intra-chr q24.33 Oncogene q24.33 Seq+ 62107 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EP400-SFSWAP EP400 chr12 132476001 - SFSWAP chr12 132281723 + Exonic hg19 HNSC TCGA-CQ-7067-01A 17 9 Out-of-frame Intra-chr q24.33 Oncogene q24.33 Seq+ 62108 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EP400-SFSWAP EP400 chr12 132434581 - SFSWAP chr12 132271008 + Exonic hg19 SARC TCGA-VT-A80J-01A 6 11 5'UTR-CDS Intra-chr q24.33 Oncogene q24.33 Seq+ 62109 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EP400-TMPRSS12 EP400 chr12 132434581 - TMPRSS12 chr12 51237625 + Exonic hg19 BLCA TCGA-XF-A9SZ-01A 11 4 5'UTR-CDS Intra-chr q24.33 Oncogene q13.12 Seq+ 62110 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EP400NL-ATF7IP EP400NL chr12 132575488 - ATF7IP chr12 14649165 + Exonic hg19 PRAD TCGA-2A-AAYU-01A 10 7 5'UTR-CDS Intra-chr q24.33 p13.1 Seq+ 62111 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EP400NL-GPBP1 EP400NL chr12 132606525 - GPBP1 chr5 56526673 + Exonic hg19 LGG TCGA-TM-A84I-01A 3 3 5'UTR-5'UTR Inter-chr q24.33 q11.2 Transcription factor Seq+ 62112 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPAS1-SYPL2 EPAS1 chr2 46525076 - SYPL2 chr1 110009681 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 7 4 Out-of-frame Inter-chr p21 Tumor suppressor gene Transcription factor p13.3 Seq+ 62113 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41-ATPIF1 EPB41 chr1 29391670 - ATPIF1 chr1 28573100 + Exonic hg19 LIHC TCGA-ED-A7PX-01A 24 23 Out-of-frame Intra-chr p35.3 Tumor suppressor gene p35.3 62114 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41-HGSNAT EPB41 chr1 29323831 - HGSNAT chr8 43013718 + Exonic hg19 BLCA TCGA-2F-A9KP-01A 92 96 In-Frame Inter-chr p35.3 Tumor suppressor gene p11.21 Seq+ 62115 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41-ITPR1 EPB41 chr1 29435949 - ITPR1 chr3 4774772 + Exonic hg19 SKCM TCGA-EB-A4XL-01A 8 5 In-Frame Inter-chr p35.3 Tumor suppressor gene p26.1 Seq+ 62116 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41-PIGV EPB41 chr1 29241280 - PIGV chr1 27120604 + Exonic hg19 BLCA TCGA-GV-A3JZ-01A 3 1 5'UTR-CDS Intra-chr p35.3 Tumor suppressor gene p36.11 62117 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41-USP49 EPB41 chr1 29220349 - USP49 chr6 41774749 - Exonic hg19 LIHC TCGA-MR-A520-01A 2 1 5'UTR-5'UTR Inter-chr p35.3 Tumor suppressor gene p21.1 Seq+ 62118 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41-YTHDF2 EPB41 chr1 29320054 - YTHDF2 chr1 29068915 + Exonic hg19 UCS TCGA-N8-A4PI-01A 6 1 In-Frame Intra-chr p35.3 Tumor suppressor gene p35.3 Seq+ 62119 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41-YTHDF2 EPB41 chr1 29220349 - YTHDF2 chr1 29068915 + Exonic hg19 PCPG TCGA-QR-A70V-01A 8 3 5'UTR-5'UTR Intra-chr p35.3 Tumor suppressor gene p35.3 Seq+ 62120 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41L1-ATP9A EPB41L1 chr20 34700402 - ATP9A chr20 50346517 - Exonic hg19 BLCA TCGA-XF-A8HD-01A 10 7 5'UTR-CDS Intra-chr q11.23 q13.2 Seq+ 62121 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41L1-BCL2A1 EPB41L1 chr20 34709738 - BCL2A1 chr15 80253516 - Exonic hg19 BRCA TCGA-E2-A10C-01A 2 2 5'UTR-CDS Inter-chr q11.23 q25.1 62122 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41L1-BICD1 EPB41L1 chr20 34700402 - BICD1 chr12 32446928 + Exonic hg19 COAD TCGA-NH-A8F7-01A 6 7 5'UTR-CDS Inter-chr q11.23 p11.21 62123 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41L1-C20orf152 EPB41L1 chr20 34800298 - C20orf152 chr20 34582960 + Exonic hg19 LUSC TCGA-98-A538-01A 85 36 In-Frame Intra-chr q11.23 Seq+ 62124 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41L1-C20orf152 EPB41L1 chr20 34700402 - C20orf152 chr20 34582960 + Exonic hg19 STAD TCGA-HF-7132-01A 3 27 5'UTR-CDS Intra-chr q11.23 Seq+ 62125 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41L1-GHRH EPB41L1 chr20 34700402 - GHRH chr20 35885311 - Exonic hg19 BRCA TCGA-A8-A079-01A 281 302 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 62126 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41L1-NDRG3 EPB41L1 chr20 34700402 - NDRG3 chr20 35282104 - Exonic hg19 STAD TCGA-CG-4304-01A 8 12 5'UTR-CDS Intra-chr q11.23 q11.23 Seq+ 62127 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41L1-NNAT EPB41L1 chr20 34800298 - NNAT chr20 36151069 + Exonic hg19 COAD TCGA-G4-6323-01A 2 1 In-Frame Intra-chr q11.23 q11.23 Tumor suppressor gene 62128 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41L1-PHF20 EPB41L1 chr20 34713449 - PHF20 chr20 34430495 + Exonic hg19 KIRC TCGA-B0-4811-01A 2 2 Out-of-frame Intra-chr q11.23 q11.22 Transcription factor Seq+ 62129 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41L1-PHF20 EPB41L1 chr20 34680735 - PHF20 chr20 34501171 + Exonic hg19 STAD TCGA-FP-8631-01A 2 4 5'UTR-CDS Intra-chr q11.23 q11.22 Transcription factor Seq+ 62130 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41L1-PHF20 EPB41L1 chr20 34820721 - PHF20 chr20 34437311 + Exonic hg19 UCS TCGA-N8-A4PO-01A 5 4 Out-of-frame Intra-chr q11.23 q11.22 Transcription factor Seq+ 62131 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41L1-TGM3 EPB41L1 chr20 34680735 - TGM3 chr20 2290303 + Exonic hg19 HNSC TCGA-CN-4733-01A 14 9 5'UTR-CDS Intra-chr q11.23 p13 Tumor suppressor gene Seq+ 62132 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41L2-C6orf103 EPB41L2 chr6 131384295 - C6orf103 chr6 146956511 + Exonic hg19 SARC TCGA-QC-A6FX-01A 4 4 Out-of-frame Intra-chr q23.2 62133 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41L2-LAMA2 EPB41L2 chr6 131247745 - LAMA2 chr6 129704267 + Exonic hg19 LUSC TCGA-66-2788-01A 3 1 In-Frame Intra-chr q23.2 q22.33 Seq+ 62134 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41L2-MAP4K1 EPB41L2 chr6 131384295 - MAP4K1 chr19 39078457 - Exonic hg19 COAD TCGA-AY-6196-01A 6 3 5'UTR-CDS Inter-chr q23.2 Tumor suppressor gene Seq+ 62135 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41L2-PTPRK EPB41L2 chr6 131276245 - PTPRK chr6 128330413 - Exonic hg19 SARC TCGA-IF-A3RQ-01A 3 4 Out-of-frame Intra-chr q23.2 Tumor suppressor gene Seq+ 62136 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41L2-STAT3 EPB41L2 chr6 131384295 - STAT3 chr17 40474512 - Exonic hg19 COAD TCGA-G4-6317-02A 45 41 5'UTR-CDS Inter-chr q23.2 q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 62137 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41L3-LAMA1 EPB41L3 chr18 5395066 - LAMA1 chr18 7037750 - Exonic hg19 BRCA TCGA-BH-A0HB-01A 6 6 In-Frame Intra-chr p11.31 Tumor suppressor gene p11.31 Seq+ 62138 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41L3-LRRC34 EPB41L3 chr18 5478240 - LRRC34 chr3 169513399 - Exonic hg19 LUSC TCGA-33-4586-01A 2 1 Out-of-frame Inter-chr p11.31 Tumor suppressor gene q26.2 62139 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41L4A-PLAC8L1 EPB41L4A chr5 111754638 - PLAC8L1 chr5 145477855 - Exonic hg19 LUAD TCGA-55-6543-01A 33 17 Out-of-frame Intra-chr q22.2 q32 Seq+ 62140 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41L4B-PTPN3 EPB41L4B chr9 112030671 - PTPN3 chr9 112172695 - Exonic hg19 BRCA TCGA-BH-A0B9-01A 10 17 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 62141 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB41L5-FZR1 EPB41L5 chr2 120799686 - FZR1 chr19 3522954 + Exonic hg19 SARC TCGA-DX-A1KZ-01A 3 6 CDS-5'UTR Inter-chr q14.2 p13.3 Oncogene Tumor suppressor gene Seq+ 62142 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPB49-SCN2A EPB49 chr8 21940035 - SCN2A chr2 166150541 + Exonic hg19 LGG TCGA-HT-8107-01A 2 6 Out-of-frame Inter-chr q24.3 62143 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPC1-AKR1E2 EPC1 chr10 32635691 - AKR1E2 chr10 4872867 + Exonic hg19 ESCA TCGA-IG-A8O2-01A 6 71 In-Frame Intra-chr p11.22 p15.1 Seq+ 62144 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPC1-ARHGAP28 EPC1 chr10 32580091 - ARHGAP28 chr18 6873408 + Exonic hg19 ESCA TCGA-L5-A4OR-01A 12 154 In-Frame Inter-chr p11.22 p11.31 Seq+ 62145 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPC1-DIP2C EPC1 chr10 32667419 - DIP2C chr10 465139 - Exonic hg19 SKCM TCGA-EB-A5UN-06A 23 2 5'UTR-CDS Intra-chr p11.22 p15.3 Seq+ 62146 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPC1-PTGR2 EPC1 chr10 32635691 - PTGR2 chr14 74340726 + Exonic hg19 BRCA TCGA-BH-A0C7-01B 101 71 In-Frame Inter-chr p11.22 q24.3 Seq+ 62147 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPC1-QPCT EPC1 chr10 32594700 - QPCT chr2 37586723 + Exonic hg19 HNSC TCGA-UF-A71E-01A 6 13 Out-of-frame Inter-chr p11.22 p22.2 Seq+ 62148 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPC2-MBD5 EPC2 chr2 149528956 - MBD5 chr2 149215772 + Exonic hg19 BRCA TCGA-A8-A08F-01A 3 1 CDS-5'UTR Intra-chr q23.1 q23.1 62149 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPC2-THSD7B EPC2 chr2 149447942 - THSD7B chr2 137813990 + Exonic hg19 BRCA TCGA-A2-A04P-01A 2 2 Out-of-frame Intra-chr q23.1 q22.1 Seq+ 62150 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPG5-ST8SIA5 EPG5 chr18 43547143 - ST8SIA5 chr18 44284627 - Exonic hg19 LUSC TCGA-22-4594-01A 12 2 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 62151 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPHA10-COL8A2 EPHA10 chr1 38192774 - COL8A2 chr1 36581353 - Exonic hg19 LUAD TCGA-J2-A4AD-01A 5 2 CDS-5'UTR Intra-chr p34.3 p34.3 Seq+ 62152 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPHA2-FBXO42 EPHA2 chr1 16474873 - FBXO42 chr1 16583254 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 6 105 In-Frame Intra-chr p36.13 Tumor suppressor gene p36.13 Seq+ 62153 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPHA2-LSM14B EPHA2 chr1 16474873 - LSM14B chr20 60699673 + Exonic hg19 UCS TCGA-N9-A4PZ-01A 34 10 In-Frame Inter-chr p36.13 Tumor suppressor gene q13.33 Seq+ 62154 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPHA3-ABCA9 EPHA3 chr3 89480509 - ABCA9 chr17 67047280 - Exonic hg19 THYM TCGA-ZB-A96L-01A 9 5 CDS-5'UTR Inter-chr p11.1 Oncogene Tumor suppressor gene q24.2 Seq+ 62155 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPHA4-COL4A3 EPHA4 chr2 222428451 - COL4A3 chr2 228102684 + Exonic hg19 LUSC TCGA-34-5236-01A 2 1 Out-of-frame Intra-chr q36.1 q36.3 Seq+ 62156 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPHA5-RUFY3 EPHA5 chr4 66356095 - RUFY3 chr4 71628236 + Exonic hg19 LUAD TCGA-91-6848-01A 4 4 In-Frame Intra-chr q13.2 Oncogene q13.3 Seq+ 62157 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPHA6-C11orf80 EPHA6 chr3 96963131 - C11orf80 chr11 66583524 + Exonic hg19 BRCA TCGA-LL-A7SZ-01A 6 5 In-Frame Inter-chr q11.2 q13.2 62158 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPHA6-CNTN6 EPHA6 chr3 96585733 - CNTN6 chr3 1443117 + Exonic hg19 PRAD TCGA-KK-A59X-01A 11 11 Out-of-frame Intra-chr q11.2 p26.3 Seq+ 62159 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPHA6-RG9MTD1 EPHA6 chr3 96706837 - RG9MTD1 chr3 101283614 + Exonic hg19 BRCA TCGA-BH-A0HW-01A 5 1 5'UTR-5'UTR Intra-chr q11.2 62160 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPHA6-TSC22D2 EPHA6 chr3 96585733 - TSC22D2 chr3 150174863 + Exonic hg19 LIHC TCGA-DD-AA3A-01A 15 8 Out-of-frame Intra-chr q11.2 q25.1 Seq+ 62161 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPHB1-BFSP2 EPHB1 chr3 134873118 - BFSP2 chr3 133166161 + Exonic hg19 LGG TCGA-HT-A617-01A 20 8 In-Frame Intra-chr q22.2 Oncogene q22.1 Seq+ 62162 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPHB2-NTRK1 EPHB2 chr1 23111569 - NTRK1 chr1 156843425 + Exonic hg19 LGG TCGA-TM-A84J-01A 129 62 In-Frame Intra-chr p36.12 Tumor suppressor gene q23.1 Oncogene Seq+ 62163 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPHB2-PDZD4 EPHB2 chr1 23111569 - PDZD4 chrX 153074050 - Exonic hg19 LGG TCGA-KT-A7W1-01A 15 19 Out-of-frame Inter-chr p36.12 Tumor suppressor gene q28 Seq+ 62164 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPHB3-P2RY12 EPHB3 chr3 184280141 - P2RY12 chr3 151058548 - Exonic hg19 CESC TCGA-C5-A7UH-01A 3 2 CDS-5'UTR Intra-chr q27.1 Tumor suppressor gene q25.1 Seq+ 62165 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPHB3-PAX2 EPHB3 chr3 184290964 - PAX2 chr10 102566187 + Exonic hg19 SARC TCGA-DX-A23R-01A 9 4 In-Frame Inter-chr q27.1 Tumor suppressor gene q24.31 Transcription factor Seq+ 62166 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPHX1-RAD51B EPHX1 chr1 226032324 - RAD51B chr14 69061202 + Exonic hg19 LIHC TCGA-DD-A11C-01A 60 41 Out-of-frame Inter-chr q42.12 q24.1 Seq+ 62167 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPHX1-SEC63 EPHX1 chr1 226033260 - SEC63 chr6 108214782 - Exonic hg19 LIHC TCGA-CC-A7IL-01A 2 113 Out-of-frame Inter-chr q42.12 q21 62168 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPHX2-BNIP3L EPHX2 chr8 27401761 - BNIP3L chr8 26265516 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 2 4 Out-of-frame Intra-chr p21.2 p21.2 Tumor suppressor gene Seq+ 62169 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPHX2-PTK2B EPHX2 chr8 27375589 - PTK2B chr8 27308266 + Exonic hg19 BLCA TCGA-HQ-A2OE-01A 29 8 In-Frame Intra-chr p21.2 p21.2 Seq+ 62170 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPN1-U2AF2 EPN1 chr19 56190221 - U2AF2 chr19 56185300 + Exonic hg19 LUSC TCGA-33-4547-01A 242 96 In-Frame Intra-chr q13.42 q13.42 Seq+ 62171 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPN1-U2AF2 EPN1 chr19 56188584 - U2AF2 chr19 56179873 + Exonic hg19 LUAD TCGA-MP-A4SW-01A 6 5 Out-of-frame Intra-chr q13.42 q13.42 Seq+ 62172 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPN2-AKAP10 EPN2 chr17 19140844 - AKAP10 chr17 19871774 - Exonic hg19 BRCA TCGA-A7-A2KD-01A 2 1 5'UTR-CDS Intra-chr p11.2 p11.2 62173 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPN2-KCNJ12 EPN2 chr17 19140844 - KCNJ12 chr17 21311831 + Exonic hg19 BLCA TCGA-BT-A20Q-01A 4 55 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 62174 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPN2-MAP2K3 EPN2 chr17 19140844 - MAP2K3 chr17 21201725 + Exonic hg19 BLCA TCGA-K4-A4AC-01A 24 36 5'UTR-5'UTR Intra-chr p11.2 p11.2 STE:STE7 Seq+ 62175 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPN2-PIBF1 EPN2 chr17 19140844 - PIBF1 chr13 73467922 + Exonic hg19 SARC TCGA-LI-A9QH-01A 9 13 5'UTR-CDS Inter-chr p11.2 q21.33 Seq+ 62176 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPN2-SLC5A10 EPN2 chr17 19140844 - SLC5A10 chr17 18916723 + Exonic hg19 PRAD TCGA-KK-A5A1-01A 2 7 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 62177 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPN3-AGPAT3 EPN3 chr17 48616676 - AGPAT3 chr21 45379515 + Exonic hg19 ESCA TCGA-R6-A8W5-01B 4 55 CDS-5'UTR Inter-chr q21.33 q22.3 Seq+ 62178 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPN3-SEMA4G EPN3 chr17 48610346 - SEMA4G chr10 102733304 + Exonic hg19 PRAD TCGA-J4-AATZ-01A 6 1 5'UTR-CDS Inter-chr q21.33 q24.31 62179 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPRS-DNAH14 EPRS chr1 220160484 - DNAH14 chr1 225506285 + Exonic hg19 BRCA TCGA-A7-A26I-01B 26 49 Out-of-frame Intra-chr q41 q42.12 Seq+ 62180 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPRS-USH2A EPRS chr1 220213527 - USH2A chr1 215853718 - Exonic hg19 SKCM TCGA-EB-A551-01A 7 1 Out-of-frame Intra-chr q41 q41 Seq+ 62181 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPS15-C1orf159 EPS15 chr1 51929345 - C1orf159 chr1 1027483 - Exonic hg19 SKCM TCGA-EB-A82C-01A 13 6 CDS-5'UTR Intra-chr p32.3 p36.33 Seq+ 62182 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPS15-CCDC18 EPS15 chr1 51934145 - CCDC18 chr1 93676359 + Exonic hg19 BLCA TCGA-UY-A78N-01A 3 5 In-Frame Intra-chr p32.3 p22.1 Seq+ 62183 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPS15-INADL EPS15 chr1 51984871 - INADL chr1 62503649 + Exonic hg19 LUAD TCGA-91-8499-01A 17 7 Out-of-frame Intra-chr p32.3 62184 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPS15-OSBPL9 EPS15 chr1 51946945 - OSBPL9 chr1 52246836 + Exonic hg19 HNSC TCGA-CV-5971-01A 2 1 Out-of-frame Intra-chr p32.3 p32.3 62185 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPS15L1-AKAP8 EPS15L1 chr19 16539513 - AKAP8 chr19 15485446 - Exonic hg19 STAD TCGA-CG-4449-01A 26 20 Out-of-frame Intra-chr p13.11 p13.12 Transcription factor Seq+ 62186 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPS15L1-BRD4 EPS15L1 chr19 16545176 - BRD4 chr19 15383944 - Exonic hg19 BRCA TCGA-AC-A2FM-01A 11 2 CDS-5'UTR Intra-chr p13.11 p13.12 Atypical:BRD Seq+ 62187 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPS15L1-CALR3 EPS15L1 chr19 16582724 - CALR3 chr19 16689220 - Exonic hg19 BRCA TCGA-A7-A13D-01A 9 7 CDS-5'UTR Intra-chr p13.11 p13.11 Seq+ 62188 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPS15L1-CALR3 EPS15L1 chr19 16503115 - CALR3 chr19 16689220 - Exonic hg19 BRCA TCGA-B6-A3ZX-01A 5 3 CDS-5'UTR Intra-chr p13.11 p13.11 Seq+ 62189 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPS15L1-CALR3 EPS15L1 chr19 16582724 - CALR3 chr19 16594926 - Exonic hg19 LIHC TCGA-BC-A10Z-01A 7 50 In-Frame Intra-chr p13.11 p13.11 Seq+ 62190 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPS15L1-CLNS1A EPS15L1 chr19 16552703 - CLNS1A chr11 77330740 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 19 39 Out-of-frame Inter-chr p13.11 q14.1 Seq+ 62191 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPS15L1-CPAMD8 EPS15L1 chr19 16582724 - CPAMD8 chr19 17049256 - Exonic hg19 PRAD TCGA-YJ-A8SW-01A 16 29 In-Frame Intra-chr p13.11 p13.11 Seq+ 62192 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPS15L1-ZNF451 EPS15L1 chr19 16495940 - ZNF451 chr6 57018659 + Exonic hg19 LGG TCGA-TM-A7CF-01A 4 9 In-Frame Inter-chr p13.11 p12.1 Transcription factor Seq+ 62193 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPS15L1-ZNF473 EPS15L1 chr19 16545176 - ZNF473 chr19 50547927 + Exonic hg19 LUSC TCGA-56-6545-01A 14 12 Out-of-frame Intra-chr p13.11 q13.33 Transcription factor Seq+ 62194 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPS15L1-ZNF568 EPS15L1 chr19 16524584 - ZNF568 chr19 37413488 + Exonic hg19 SKCM TCGA-ER-A19M-06A 2 2 CDS-5'UTR Intra-chr p13.11 q13.12 Transcription factor Seq+ 62195 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPS8-GYS2 EPS8 chr12 15942095 - GYS2 chr12 21733457 - Exonic hg19 LUAD TCGA-97-7554-01A 5 3 5'UTR-CDS Intra-chr p12.3 p12.1 Seq+ 62196 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPS8-PIK3C2G EPS8 chr12 15942095 - PIK3C2G chr12 18641383 + Exonic hg19 BLCA TCGA-DK-A3IQ-01A 3 2 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 62197 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPS8-PLEKHA5 EPS8 chr12 15942095 - PLEKHA5 chr12 19489449 + Exonic hg19 OV TCGA-61-2102-01A 18 10 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 62198 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPS8-PRH2 EPS8 chr12 15942095 - PRH2 chr12 11082868 + Exonic hg19 LUAD TCGA-78-7536-01A 7 1 5'UTR-CDS Intra-chr p12.3 Seq+ 62199 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPS8-RERGL EPS8 chr12 15942095 - RERGL chr12 18241890 - Exonic hg19 STAD TCGA-BR-A4PF-01A 11 159 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 62200 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EPS8L2-AGPAT2 EPS8L2 chr11 709608 - AGPAT2 chr9 139569259 - Exonic hg19 HNSC TCGA-CQ-5333-01A 319 251 Out-of-frame Inter-chr p15.5 q34.3 Seq+ 62201 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERAL1-DIDO1 ERAL1 chr17 27182335 - DIDO1 chr20 61513766 - Exonic hg19 BRCA TCGA-A1-A0SJ-01A 5 2 In-Frame Inter-chr q11.2 q13.33 Tumor suppressor gene Seq+ 62202 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB2-CDK12 ERBB2 chr17 37868701 - CDK12 chr17 37680927 + Exonic hg19 BRCA TCGA-BH-A204-01A 175 75 In-Frame Intra-chr q12 Oncogene q12 Oncogene Seq+ 62203 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB2-CLDN7 ERBB2 chr17 37884915 - CLDN7 chr17 7166264 - Exonic hg19 BRCA TCGA-UU-A93S-01A 2 2 3'UTR-5'UTR Intra-chr q12 Oncogene p13.1 62204 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB2-DNAJC7 ERBB2 chr17 37844531 - DNAJC7 chr17 40134419 - Exonic hg19 COAD TCGA-D5-6531-01A 32 18 5'UTR-CDS Intra-chr q12 Oncogene q21.2 Seq+ 62205 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB2-IKZF3 ERBB2 chr17 37872858 - IKZF3 chr17 37985741 - Exonic hg19 CESC TCGA-C5-A2LX-01A 15 12 Out-of-frame Intra-chr q12 Oncogene q21.1 Tumor suppressor gene Transcription factor Seq+ 62206 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB2-NEUROD2 ERBB2 chr17 37856564 - NEUROD2 chr17 37762857 - Exonic hg19 CESC TCGA-DS-A7WF-01A 266 118 5'UTR-5'UTR Intra-chr q12 Oncogene q12 Transcription factor Seq+ 62207 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB2-PGAP3 ERBB2 chr17 37851434 - PGAP3 chr17 37830932 - Exonic hg19 CESC TCGA-Q1-A73R-01A 181 75 5'UTR-CDS Intra-chr q12 Oncogene q12 Oncogene Seq+ 62208 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB2-PPP1R1B ERBB2 chr17 37866734 - PPP1R1B chr17 37790136 + Exonic hg19 BLCA TCGA-DK-A1A3-01A 22 13 In-Frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 62209 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB2-PPP1R1B ERBB2 chr17 37883800 - PPP1R1B chr17 37791860 + Exonic hg19 LIHC TCGA-KR-A7K2-01A 13 11 In-Frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 62210 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB2-PPP1R1B ERBB2 chr17 37883800 - PPP1R1B chr17 37791860 + Exonic hg19 PAAD TCGA-LB-A7SX-01A 8 7 In-Frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 62211 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB2-PPP1R1B ERBB2 chr17 37883800 - PPP1R1B chr17 37791860 + Exonic hg19 CESC TCGA-Q1-A73R-01A 10759 22613 In-Frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 62212 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB2-PSMB3 ERBB2 chr17 37876087 - PSMB3 chr17 36916684 + Exonic hg19 ESCA TCGA-L5-A88V-01A 1368 21766 In-Frame Intra-chr q12 Oncogene Seq+ 62213 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB2-SLC29A3 ERBB2 chr17 37883256 - SLC29A3 chr10 73121711 + Exonic hg19 BRCA TCGA-AR-A254-01A 724 688 Out-of-frame Inter-chr q12 Oncogene q22.1 Seq+ 62214 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB2-SLC39A11 ERBB2 chr17 37871789 - SLC39A11 chr17 71084914 - Exonic hg19 BRCA TCGA-A2-A0YE-01A 8 4 CDS-5'UTR Intra-chr q12 Oncogene q25.1 62215 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB2-SUPT16H ERBB2 chr17 37884915 - SUPT16H chr14 21829491 - Exonic hg19 LUAD TCGA-69-7761-01A 2 1 Out-of-frame Inter-chr q12 Oncogene q11.2 62216 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB2-TCAP ERBB2 chr17 37872858 - TCAP chr17 37821969 + Exonic hg19 LUSC TCGA-56-A4BY-01A 42 19 Out-of-frame Intra-chr q12 Oncogene q12 Seq+ 62217 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB2IP-ARL15 ERBB2IP chr5 65310553 - ARL15 chr5 53182543 - Exonic hg19 SKCM TCGA-D3-A1Q5-06A 22 9 Out-of-frame Intra-chr q11.2 62218 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB2IP-ASXL1 ERBB2IP chr5 65350779 - ASXL1 chr20 31015931 + Exonic hg19 LUAD TCGA-50-5944-01A 18 4 In-Frame Inter-chr q11.21 Oncogene Tumor suppressor gene 62219 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB2IP-C5orf44 ERBB2IP chr5 65288735 - C5orf44 chr5 64931128 + Exonic hg19 BRCA TCGA-GM-A2DD-01A 2 1 Out-of-frame Intra-chr 62220 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB2IP-MYOM2 ERBB2IP chr5 65222634 - MYOM2 chr8 2005466 + Exonic hg19 BLCA TCGA-GC-A4ZW-01A 3 2 5'UTR-CDS Inter-chr p23.3 62221 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB2IP-NLN ERBB2IP chr5 65222634 - NLN chr5 65105342 + Exonic hg19 BRCA TCGA-PE-A5DC-01A 51 50 5'UTR-CDS Intra-chr q12.3 Seq+ 62222 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB2IP-PPWD1 ERBB2IP chr5 65222634 - PPWD1 chr5 64872706 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 8 7 5'UTR-5'UTR Intra-chr q12.3 Seq+ 62223 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB2IP-TMEM232 ERBB2IP chr5 65350779 - TMEM232 chr5 109760617 - Exonic hg19 SKCM TCGA-D3-A2JH-06A 62 24 Out-of-frame Intra-chr q22.1 Seq+ 62224 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB2IP-ZBTB10 ERBB2IP chr5 65290692 - ZBTB10 chr8 81411729 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 11 8 Out-of-frame Inter-chr q21.13 Transcription factor Seq+ 62225 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB3-COX4I2 ERBB3 chr12 56474166 - COX4I2 chr20 30231207 + Exonic hg19 UCEC TCGA-AJ-A3I9-01A 65 69 In-Frame Inter-chr q13.2 Oncogene q11.21 Seq+ 62226 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB3-FOXA1 ERBB3 chr12 56497283 - FOXA1 chr14 38069245 - Exonic hg19 PRAD TCGA-KK-A6E4-01A 2 1 Out-of-frame Inter-chr q13.2 Oncogene q21.1 Tumor suppressor gene Transcription factor 62227 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB3-RPL30 ERBB3 chr12 56497283 - RPL30 chr8 99058697 - Exonic hg19 SKCM TCGA-D3-A1Q1-06A 3 1 Out-of-frame Inter-chr q13.2 Oncogene q22.2 62228 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERBB3-SUOX ERBB3 chr12 56494029 - SUOX chr12 56395996 + Exonic hg19 LUSC TCGA-98-A53A-01A 2 2 CDS-5'UTR Intra-chr q13.2 Oncogene q13.2 62229 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERC1-GABRB1 ERC1 chr12 1299218 - GABRB1 chr4 47322144 + Exonic hg19 STAD TCGA-CG-4476-01A 3 1 In-Frame Inter-chr p12 62230 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERC1-GPC5 ERC1 chr12 1250953 - GPC5 chr13 93518535 + Exonic hg19 READ TCGA-F5-6864-01A 2 2 Out-of-frame Inter-chr q31.3 Tumor suppressor gene 62231 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERC1-HEBP1 ERC1 chr12 1517413 - HEBP1 chr12 13142349 - Exonic hg19 HNSC TCGA-UF-A7J9-01A 13 8 In-Frame Intra-chr p13.1 Seq+ 62232 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERC1-METTL4 ERC1 chr12 1346070 - METTL4 chr18 2567653 - Exonic hg19 SKCM TCGA-D3-A1Q9-06A 148 136 5'UTR-5'UTR Inter-chr p11.32 Seq+ 62233 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERC1-MRPL51 ERC1 chr12 1100653 - MRPL51 chr12 6602138 - Exonic hg19 LUSC TCGA-56-8622-01A 16 5 5'UTR-CDS Intra-chr p13.31 Seq+ 62234 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERC1-MRPS9 ERC1 chr12 1481143 - MRPS9 chr2 105716128 + Exonic hg19 SARC TCGA-QQ-A5VC-01A 136 44 Out-of-frame Inter-chr q12.1 Seq+ 62235 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERC1-PIK3C2G ERC1 chr12 1299218 - PIK3C2G chr12 18641383 + Exonic hg19 BRCA TCGA-B6-A0IG-01A 19 19 In-Frame Intra-chr p12.3 Seq+ 62236 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERC1-RET ERC1 chr12 1250953 - RET chr10 43612032 + Exonic hg19 BRCA TCGA-C8-A1HJ-01A 16 12 In-Frame Inter-chr q11.21 TK:Ret Oncogene KB Seq+ 62237 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERC1-RET ERC1 chr12 1346070 - RET chr10 43612032 + Exonic hg19 THCA TCGA-EL-A3T9-01A 22 13 In-Frame Inter-chr q11.21 TK:Ret Oncogene KB Seq+ 62238 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERC1-RET ERC1 chr12 1553916 - RET chr10 43612032 + Exonic hg19 THCA TCGA-EM-A3FQ-01A 10 14 In-Frame Inter-chr q11.21 TK:Ret Oncogene KB Seq+ 62239 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERC1-TACC3 ERC1 chr12 1192746 - TACC3 chr4 1741429 + Exonic hg19 BRCA TCGA-E2-A9RU-01A 7 12 In-Frame Inter-chr p16.3 Seq+ 62240 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERC1-TOMM34 ERC1 chr12 1517413 - TOMM34 chr20 43572220 - Exonic hg19 BRCA TCGA-C8-A12P-01A 59 37 Out-of-frame Inter-chr q13.12 Seq+ 62241 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERC1-VWF ERC1 chr12 1372331 - VWF chr12 6085426 - Exonic hg19 LUAD TCGA-05-4415-01A 10 11 In-Frame Intra-chr p13.31 Seq+ 62242 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERC1-WNK1 ERC1 chr12 1137738 - WNK1 chr12 987378 + Exonic hg19 LUAD TCGA-78-8660-01A 6 2 In-Frame Intra-chr p13.33 Seq+ 62243 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERC1-WNK1 ERC1 chr12 1213990 - WNK1 chr12 977032 + Exonic hg19 ESCA TCGA-L5-A8NI-01A 2 19 In-Frame Intra-chr p13.33 Seq+ 62244 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERC2-ARHGEF3 ERC2 chr3 56468379 - ARHGEF3 chr3 56916382 - Exonic hg19 BRCA TCGA-A1-A0SO-01A 4 13 In-Frame Intra-chr p14.3 p14.3 Seq+ 62245 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERC2-DNAH12 ERC2 chr3 55984453 - DNAH12 chr3 57357647 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 6 2 In-Frame Intra-chr p14.3 p14.3 62246 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERCC2-C12orf40 ERCC2 chr19 45872188 - C12orf40 chr12 40110558 + Exonic hg19 LGG TCGA-S9-A7R3-01A 4 2 Out-of-frame Inter-chr q13.32 Oncogene q12 Seq+ 62247 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERCC2-MYH14 ERCC2 chr19 45864782 - MYH14 chr19 50810306 + Exonic hg19 UCS TCGA-N5-A4RV-01A 2 1 Out-of-frame Intra-chr q13.32 Oncogene q13.33 62248 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERCC2-NOVA2 ERCC2 chr19 45871888 - NOVA2 chr19 46444203 - Exonic hg19 BLCA TCGA-DK-AA6P-01A 8 2 In-Frame Intra-chr q13.32 Oncogene q13.32 Seq+ 62249 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERCC3-MAP3K2 ERCC3 chr2 128038023 - MAP3K2 chr2 128072459 - Exonic hg19 LUAD TCGA-50-6592-01A 6 5 In-Frame Intra-chr q14.3 Oncogene q14.3 STE:STE11 Seq+ 62250 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERG-ABCC4 ERG chr21 39947586 - ABCC4 chr13 95900007 - Exonic hg19 PRAD TCGA-XQ-A8TB-01A 10 5 Out-of-frame Inter-chr q22.2 Oncogene Transcription factor q32.1 Seq+ 62251 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERG-KCNJ6 ERG chr21 39947586 - KCNJ6 chr21 38997786 - Exonic hg19 PRAD TCGA-KK-A6E1-01A 2 26 Out-of-frame Intra-chr q22.2 Oncogene Transcription factor q22.13 Seq+ 62252 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERG-PLEKHH1 ERG chr21 39947586 - PLEKHH1 chr14 68022542 + Exonic hg19 PRAD TCGA-CH-5739-01A 5 2 In-Frame Inter-chr q22.2 Oncogene Transcription factor q24.1 Seq+ 62253 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERG-SON ERG chr21 39947586 - SON chr21 34918519 + Exonic hg19 PRAD TCGA-HC-7230-01A 10 3 Out-of-frame Intra-chr q22.2 Oncogene Transcription factor q22.11 Transcription factor Seq+ 62254 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERG-TAF8 ERG chr21 39947586 - TAF8 chr6 42019095 + Exonic hg19 PRAD TCGA-EJ-7797-01A 4 3 In-Frame Inter-chr q22.2 Oncogene Transcription factor p21.1 Seq+ 62255 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERG-TMPRSS2 ERG chr21 39947586 - TMPRSS2 chr21 42870116 - Exonic hg19 PRAD TCGA-J4-A67S-01A 2 5 Out-of-frame Intra-chr q22.2 Oncogene Transcription factor q22.3 Seq+ 62256 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERG-TMPRSS2 ERG chr21 39947586 - TMPRSS2 chr21 42852529 - Exonic hg19 PRAD TCGA-V1-A8WS-01A 4 7 Out-of-frame Intra-chr q22.2 Oncogene Transcription factor q22.3 Seq+ 62257 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERG-ZNRF3 ERG chr21 39947586 - ZNRF3 chr22 29383064 + Exonic hg19 PRAD TCGA-J4-A83I-01A 2 1 In-Frame Inter-chr q22.2 Oncogene Transcription factor q12.1 62258 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERGIC1-GPR98 ERGIC1 chr5 172359539 - GPR98 chr5 90083888 + Exonic hg19 SKCM TCGA-EE-A2MS-06A 50 36 In-Frame Intra-chr q35.1 Seq+ 62259 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERGIC1-RANBP17 ERGIC1 chr5 172341841 - RANBP17 chr5 170720887 + Exonic hg19 LUSC TCGA-33-6737-01A 685 493 In-Frame Intra-chr q35.1 q35.1 Seq+ 62260 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERGIC1-RANBP17 ERGIC1 chr5 172341841 - RANBP17 chr5 170720887 + Exonic hg19 LUSC TCGA-33-6738-01A 6 5 In-Frame Intra-chr q35.1 q35.1 Seq+ 62261 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERGIC3-MAP1LC3A ERGIC3 chr20 34136618 - MAP1LC3A chr20 33147012 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 568 382 In-Frame Intra-chr q11.22 q11.22 Seq+ 62262 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERI3-EIF2B3 ERI3 chr1 44818522 - EIF2B3 chr1 45392411 - Exonic hg19 UCEC TCGA-JU-AAVI-01A 20 11 In-Frame Intra-chr p34.1 p34.1 Seq+ 62263 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERICH1-CTD-2021H9.3 ERICH1 chr8 642478 - CTD-2021H9.3 chr12 71441459 - Exonic hg19 SKCM TCGA-ER-A2NE-06A 35 26 Out-of-frame Inter-chr 62264 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERICH1-IYD ERICH1 chr8 618598 - IYD chr6 150710488 + Exonic hg19 LUSC TCGA-94-7943-01A 13 16 In-Frame Inter-chr q25.1 Seq+ 62265 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERICH1-PCM1 ERICH1 chr8 665861 - PCM1 chr8 17882870 + Exonic hg19 BRCA TCGA-E2-A14T-01A 7 3 Out-of-frame Intra-chr p22 Seq+ 62266 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERICH1-PTPRR ERICH1 chr8 642478 - PTPRR chr12 71286757 - Exonic hg19 SKCM TCGA-ER-A2NE-06A 6 2 In-Frame Inter-chr q15 Seq+ 62267 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERLEC1-CHAC2 ERLEC1 chr2 54021586 - CHAC2 chr2 54001279 + Exonic hg19 LIHC TCGA-CC-A3MC-01A 12 6 In-Frame Intra-chr p16.2 p16.2 Seq+ 62268 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERLIN1-DOCK1 ERLIN1 chr10 101933965 - DOCK1 chr10 129201319 + Exonic hg19 DLBC TCGA-VB-A8QN-01A 12 9 In-Frame Intra-chr q24.31 q26.2 Seq+ 62269 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERLIN1-HPSE2 ERLIN1 chr10 101923761 - HPSE2 chr10 100219496 - Exonic hg19 PRAD TCGA-YL-A9WJ-01A 2 1 Out-of-frame Intra-chr q24.31 q24.2 62270 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERMP1-RBBP8 ERMP1 chr9 5830727 - RBBP8 chr18 20555116 + Exonic hg19 LUSC TCGA-6A-AB49-01A 5 2 In-Frame Inter-chr p24.1 q11.2 Tumor suppressor gene 62271 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERN1-TEX2 ERN1 chr17 62157022 - TEX2 chr17 62254831 - Exonic hg19 LIHC TCGA-BC-A10R-01A 2 2 In-Frame Intra-chr q23.3 q23.3 Seq+ 62272 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERN1-TEX2 ERN1 chr17 62157022 - TEX2 chr17 62272455 - Exonic hg19 LIHC TCGA-CC-A7IJ-01A 11 10 In-Frame Intra-chr q23.3 q23.3 Seq+ 62273 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERN1-TEX2 ERN1 chr17 62141346 - TEX2 chr17 62238293 - Exonic hg19 ACC TCGA-OR-A5K6-01A 173 46 In-Frame Intra-chr q23.3 q23.3 Seq+ 62274 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERO1LB-HEATR1 ERO1LB chr1 236415350 - HEATR1 chr1 236721829 - Exonic hg19 OV TCGA-23-1023-01R 13 14 In-Frame Intra-chr q43 Seq+ 62275 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERO1LB-HEATR1 ERO1LB chr1 236388370 - HEATR1 chr1 236721829 - Exonic hg19 LUAD TCGA-91-6831-01A 5 5 In-Frame Intra-chr q43 Seq+ 62276 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERP44-CHRDL2 ERP44 chr9 102814699 - CHRDL2 chr11 74429877 - Exonic hg19 HNSC TCGA-DQ-5624-01A 164 105 In-Frame Inter-chr q31.1 q13.4 Seq+ 62277 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERRFI1-CACNA1E ERRFI1 chr1 8086218 - CACNA1E chr1 181546902 + Exonic hg19 THCA TCGA-4C-A93U-01A 5 13 5'UTR-CDS Intra-chr p36.23 Tumor suppressor gene q25.3 Seq+ 62278 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERRFI1-LUZP1 ERRFI1 chr1 8086218 - LUZP1 chr1 23436143 - Exonic hg19 BLCA TCGA-DK-A1A3-01A 2 4 5'UTR-5'UTR Intra-chr p36.23 Tumor suppressor gene p36.12 Seq+ 62279 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ERRFI1-NCF2 ERRFI1 chr1 8086218 - NCF2 chr1 183542427 - Exonic hg19 STAD TCGA-VQ-A8E7-01B 5 92 5'UTR-CDS Intra-chr p36.23 Tumor suppressor gene q25.3 Seq+ 62280 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESCO1-ABHD3 ESCO1 chr18 19140820 - ABHD3 chr18 19244191 - Exonic hg19 UCEC TCGA-B5-A1MS-01B 2 2 In-Frame Intra-chr q11.2 q11.2 Seq+ 62281 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESCO1-ABHD3 ESCO1 chr18 19140820 - ABHD3 chr18 19263926 - Exonic hg19 BRCA TCGA-D8-A27H-01A 3 8 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 62282 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESCO1-ARHGAP28 ESCO1 chr18 19180584 - ARHGAP28 chr18 6824761 + Exonic hg19 STAD TCGA-VQ-AA6A-01A 4 52 5'UTR-5'UTR Intra-chr q11.2 p11.31 Seq+ 62283 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESCO1-CPNE1 ESCO1 chr18 19180584 - CPNE1 chr20 34220845 - Exonic hg19 BLCA TCGA-G2-AA3B-01A 4 5 5'UTR-5'UTR Inter-chr q11.2 q11.22 Seq+ 62284 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESCO1-FAM65C ESCO1 chr18 19180584 - FAM65C chr20 49247393 - Exonic hg19 OV TCGA-24-1555-01A 4 1 5'UTR-5'UTR Inter-chr q11.2 Seq+ 62285 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESCO1-KANK1 ESCO1 chr18 19180584 - KANK1 chr9 710804 + Exonic hg19 BRCA TCGA-AN-A0AR-01A 7 3 5'UTR-5'UTR Inter-chr q11.2 p24.3 Tumor suppressor gene Seq+ 62286 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESCO1-LAMA3 ESCO1 chr18 19140820 - LAMA3 chr18 21353461 + Exonic hg19 LUSC TCGA-66-2766-01A 6 6 In-Frame Intra-chr q11.2 q11.2 Seq+ 62287 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESCO2-EPHX2 ESCO2 chr8 27646495 - EPHX2 chr8 27394301 + Exonic hg19 OV TCGA-23-1027-01A 2 3 In-Frame Intra-chr p21.1 p21.2 62288 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESD-FAM124A ESD chr13 47367532 - FAM124A chr13 51825604 + Exonic hg19 SARC TCGA-LI-A9QH-01A 5 3 5'UTR-CDS Intra-chr q14.2 q14.3 Seq+ 62289 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESF1-RBM19 ESF1 chr20 13709025 - RBM19 chr12 114296701 - Exonic hg19 TGCT TCGA-4K-AA1G-01A 6 3 Out-of-frame Inter-chr p12.1 q24.21 Seq+ 62290 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESPN-FBLIM1 ESPN chr1 6517432 - FBLIM1 chr1 16111043 + Exonic hg19 HNSC TCGA-CN-5366-01A 24 5 Out-of-frame Intra-chr p36.31 p36.21 Seq+ 62291 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-ASPH ESR1 chr6 152201906 - ASPH chr8 62416068 - Exonic hg19 BRCA TCGA-A2-A3KD-01A 518 305 Out-of-frame Inter-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q12.3 Seq+ 62292 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-BNC2 ESR1 chr6 152163922 - BNC2 chr9 16738483 - Exonic hg19 BRCA TCGA-BH-A1EV-01A 10 4 Out-of-frame Inter-chr q25.1 Oncogene Tumor suppressor gene Transcription factor p22.2 Transcription factor Seq+ 62293 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-C6orf211 ESR1 chr6 152023140 - C6orf211 chr6 151785588 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 33 14 5'UTR-CDS Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor Seq+ 62294 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-C6orf97 ESR1 chr6 152023140 - C6orf97 chr6 151857453 + Exonic hg19 BRCA TCGA-A2-A0CT-01A 13 14 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor 62295 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-C6orf97 ESR1 chr6 152023140 - C6orf97 chr6 151859180 + Exonic hg19 BRCA TCGA-A2-A0YG-01A 4 5 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor 62296 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-C6orf97 ESR1 chr6 152023140 - C6orf97 chr6 151869439 + Exonic hg19 BRCA TCGA-A2-A25B-01A 2 2 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor 62297 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-C6orf97 ESR1 chr6 152023140 - C6orf97 chr6 151936578 + Exonic hg19 BRCA TCGA-A2-A4S3-01A 8 10 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor 62298 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-C6orf97 ESR1 chr6 152023140 - C6orf97 chr6 151917470 + Exonic hg19 BRCA TCGA-A7-A4SC-01A 6 4 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor 62299 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-C6orf97 ESR1 chr6 152023140 - C6orf97 chr6 151894309 + Exonic hg19 BRCA TCGA-AC-A8OS-01A 8 8 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor 62300 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-C6orf97 ESR1 chr6 152023140 - C6orf97 chr6 151917470 + Exonic hg19 UCEC TCGA-AJ-A3EJ-01A 8 2 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor 62301 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-C6orf97 ESR1 chr6 152023140 - C6orf97 chr6 151894309 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 5 1 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor 62302 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-C6orf97 ESR1 chr6 152023140 - C6orf97 chr6 151857453 + Exonic hg19 UCEC TCGA-AP-A5FX-01A 3 1 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor 62303 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-C6orf97 ESR1 chr6 152129499 - C6orf97 chr6 151857453 + Exonic hg19 BRCA TCGA-AR-A24R-01A 36 33 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor 62304 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-C6orf97 ESR1 chr6 152023140 - C6orf97 chr6 151936578 + Exonic hg19 UCEC TCGA-AX-A3FW-01A 3 1 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor 62305 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-C6orf97 ESR1 chr6 152023140 - C6orf97 chr6 151865707 + Exonic hg19 BRCA TCGA-BH-A0B1-01A 3 2 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor 62306 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-C6orf97 ESR1 chr6 152023140 - C6orf97 chr6 151907024 + Exonic hg19 BRCA TCGA-BH-A0C0-01A 11 1 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor 62307 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-C6orf97 ESR1 chr6 152023140 - C6orf97 chr6 151857453 + Exonic hg19 BRCA TCGA-BH-A0HY-01A 3 2 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor 62308 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-C6orf97 ESR1 chr6 152023140 - C6orf97 chr6 151857453 + Exonic hg19 BRCA TCGA-BH-A18R-01A 41 27 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor 62309 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-C6orf97 ESR1 chr6 152011799 - C6orf97 chr6 151936578 + Exonic hg19 BRCA TCGA-D8-A1JP-01A 20 16 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor 62310 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-C6orf97 ESR1 chr6 152023140 - C6orf97 chr6 151894309 + Exonic hg19 BRCA TCGA-D8-A1XA-01A 2 1 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor 62311 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-C6orf97 ESR1 chr6 152201906 - C6orf97 chr6 151857453 + Exonic hg19 BRCA TCGA-D8-A27N-01A 19 12 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor 62312 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-C6orf97 ESR1 chr6 152023140 - C6orf97 chr6 151936578 + Exonic hg19 UCS TCGA-NG-A4VU-01A 5 1 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor 62313 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-MTHFD1L ESR1 chr6 152265643 - MTHFD1L chr6 151330955 + Exonic hg19 BRCA TCGA-BH-A5J0-01A 16 8 In-Frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 Seq+ 62314 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-PDE7B ESR1 chr6 152129499 - PDE7B chr6 136429869 + Exonic hg19 UCEC TCGA-AJ-A3IA-01A 7 2 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q23.3 Seq+ 62315 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-SIM1 ESR1 chr6 152023140 - SIM1 chr6 100841765 - Exonic hg19 SARC TCGA-HB-A3YV-01A 7 2 5'UTR-CDS Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q16.3 Transcription factor Seq+ 62316 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-SYNE1 ESR1 chr6 152265643 - SYNE1 chr6 152694354 - Exonic hg19 UCEC TCGA-BK-A139-01A 3 35 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.2 Oncogene Seq+ 62317 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-TFB1M ESR1 chr6 152265643 - TFB1M chr6 155581534 - Exonic hg19 LUSC TCGA-66-2788-01A 11 15 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.3 Seq+ 62318 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESR1-USP25 ESR1 chr6 152163922 - USP25 chr21 17138316 + Exonic hg19 BRCA TCGA-A8-A06Q-01A 12 7 Out-of-frame Inter-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q21.1 62319 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESRP2-SLC7A6 ESRP2 chr16 68265081 - SLC7A6 chr16 68321649 + Exonic hg19 BRCA TCGA-A2-A0EY-01A 25 17 In-Frame Intra-chr q22.1 q22.1 Seq+ 62320 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESRRA-C11orf20 ESRRA chr11 64074976 - C11orf20 chr11 64070954 + Exonic hg19 SKCM TCGA-GN-A4U3-06A 99 74 In-Frame Intra-chr q13.1 Transcription factor 62321 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESRRA-KCNK4 ESRRA chr11 64074976 - KCNK4 chr11 64064350 + Exonic hg19 LIHC TCGA-2Y-A9GZ-01A 70 53 Out-of-frame Intra-chr q13.1 Transcription factor q13.1 Seq+ 62322 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESRRG-ACBD3 ESRRG chr1 216850418 - ACBD3 chr1 226353701 - Exonic hg19 BRCA TCGA-B6-A0IQ-01A 3 1 In-Frame Intra-chr q41 Transcription factor q42.12 62323 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESRRG-ADCY10 ESRRG chr1 217038403 - ADCY10 chr1 167794093 - Exonic hg19 BRCA TCGA-C8-A12L-01A 17 8 5'UTR-CDS Intra-chr q41 Transcription factor q24.2 Seq+ 62324 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESYT1-MED14 ESYT1 chr12 56532797 - MED14 chrX 40514312 - Exonic hg19 LUAD TCGA-86-7954-01A 23 13 In-Frame Inter-chr q13.2 p11.4 Seq+ 62325 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESYT2-C7orf58 ESYT2 chr7 158552177 - C7orf58 chr7 120704292 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 13 23 In-Frame Intra-chr q36.3 62326 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ESYT3-ARMC8 ESYT3 chr3 138153967 - ARMC8 chr3 137963930 + Exonic hg19 UCEC TCGA-PG-A914-01A 3 1 In-Frame Intra-chr q22.3 q22.3 62327 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETF1-C5orf44 ETF1 chr5 137878522 - C5orf44 chr5 64951463 + Exonic hg19 PRAD TCGA-HC-8259-01A 11 3 Out-of-frame Intra-chr q31.2 62328 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETF1-HSPA9 ETF1 chr5 137878522 - HSPA9 chr5 137897478 - Exonic hg19 PAAD TCGA-LB-A9Q5-01A 9 3 Out-of-frame Intra-chr q31.2 q31.2 Seq+ 62329 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETFA-STRA6 ETFA chr15 76566753 - STRA6 chr15 74494623 - Exonic hg19 BRCA TCGA-E9-A5UO-01A 18 9 In-Frame Intra-chr q24.3 q24.1 Seq+ 62330 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETFB-LIM2 ETFB chr19 51857404 - LIM2 chr19 51883893 - Exonic hg19 BRCA TCGA-B6-A0RT-01A 78 46 Out-of-frame Intra-chr q13.41 q13.41 Seq+ 62331 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETHE1-BMP5 ETHE1 chr19 44030667 - BMP5 chr6 55639041 - Exonic hg19 LUAD TCGA-55-7815-01A 2 2 In-Frame Inter-chr q13.31 p12.1 Seq+ 62332 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETHE1-CADM4 ETHE1 chr19 44015589 - CADM4 chr19 44131942 - Exonic hg19 LUSC TCGA-66-2758-01A 5 7 In-Frame Intra-chr q13.31 q13.31 Tumor suppressor gene 62333 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETHE1-PLAUR ETHE1 chr19 44030667 - PLAUR chr19 44159725 - Exonic hg19 ESCA TCGA-L5-A8NI-01A 5 34 In-Frame Intra-chr q13.31 q13.31 Seq+ 62334 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETHE1-UPK3A ETHE1 chr19 44030667 - UPK3A chr22 45691441 + Exonic hg19 OV TCGA-13-1405-01A 18 21 Out-of-frame Inter-chr q13.31 q13.31 Seq+ 62335 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETNK1-CMAS ETNK1 chr12 22812088 - CMAS chr12 22208083 + Exonic hg19 LUSC TCGA-77-8143-01A 8 5 In-Frame Intra-chr p12.1 p12.1 Seq+ 62336 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETNK1-GLT1D1 ETNK1 chr12 22778520 - GLT1D1 chr12 129429871 + Exonic hg19 LUAD TCGA-05-4434-01A 21 6 In-Frame Intra-chr p12.1 q24.33 Seq+ 62337 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETNK1-ITPR2 ETNK1 chr12 22826594 - ITPR2 chr12 26634174 - Exonic hg19 STAD TCGA-D7-8575-01A 7 56 In-Frame Intra-chr p12.1 p11.23 Seq+ 62338 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETNK1-MYO9B ETNK1 chr12 22778520 - MYO9B chr19 17298744 + Exonic hg19 OV TCGA-OY-A56P-01A 10 35 In-Frame Inter-chr p12.1 p13.11 Seq+ 62339 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETNK1-RCAN2 ETNK1 chr12 22778520 - RCAN2 chr6 46216633 - Exonic hg19 BRCA TCGA-OL-A5RZ-01A 16 7 In-Frame Inter-chr p12.1 p12.3 Seq+ 62340 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETNK2-REN ETNK2 chr1 204110443 - REN chr1 204131291 - Exonic hg19 LIHC TCGA-UB-A7MA-01A 2 1 Out-of-frame Intra-chr q32.1 q32.1 62341 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETS1-UBE2V2 ETS1 chr11 128391808 - UBE2V2 chr8 48955593 + Exonic hg19 SARC TCGA-FX-A2QS-01A 240 90 In-Frame Inter-chr q24.3 Oncogene Transcription factor q11.21 Seq+ 62342 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETV1-BTBD9 ETV1 chr7 13971127 - BTBD9 chr6 38224292 - Exonic hg19 SARC TCGA-FX-A2QS-01A 8 3 Out-of-frame Inter-chr p21.2 Oncogene Transcription factor p21.2 Seq+ 62343 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETV1-CACNA2D1 ETV1 chr7 14017052 - CACNA2D1 chr7 81695840 - Exonic hg19 SARC TCGA-3B-A9HV-01A 54 24 In-Frame Intra-chr p21.2 Oncogene Transcription factor q21.11 Seq+ 62344 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETV3-MNDA ETV3 chr1 157103904 - MNDA chr1 158811924 + Exonic hg19 PRAD TCGA-G9-7510-01A 4 7 CDS-5'UTR Intra-chr q23.1 Transcription factor q23.1 Seq+ 62345 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETV4-CCL16 ETV4 chr17 41610042 - CCL16 chr17 34305299 - Exonic hg19 BRCA TCGA-A2-A0T3-01A 4 3 In-Frame Intra-chr q21.31 Oncogene Transcription factor q12 62346 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETV4-TCAP ETV4 chr17 41610042 - TCAP chr17 37821969 + Exonic hg19 ESCA TCGA-L5-A4OW-01A 3 53 Out-of-frame Intra-chr q21.31 Oncogene Transcription factor q12 Seq+ 62347 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETV5-DGKG ETV5 chr3 185797606 - DGKG chr3 185929674 - Exonic hg19 STAD TCGA-BR-4357-01A 4 3 In-Frame Intra-chr q27.2 Oncogene Transcription factor q27.3 62348 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETV6-APOLD1 ETV6 chr12 11803094 - APOLD1 chr12 12939843 + Exonic hg19 COAD TCGA-A6-6653-01A 8 3 In-Frame Intra-chr p13.2 Tumor suppressor gene Transcription factor p13.1 Seq+ 62349 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETV6-CIDEA ETV6 chr12 11803094 - CIDEA chr18 12274092 + Exonic hg19 MESO TCGA-SC-A6LN-01A 121 103 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor p11.21 Seq+ 62350 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETV6-DUSP16 ETV6 chr12 11905513 - DUSP16 chr12 12672934 - Exonic hg19 PRAD TCGA-KK-A8I9-01A 3 1 Out-of-frame Intra-chr p13.2 Tumor suppressor gene Transcription factor 62351 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETV6-EPB41L2 ETV6 chr12 11803094 - EPB41L2 chr6 131222320 - Exonic hg19 SARC TCGA-DX-A23Y-01A 9 8 Out-of-frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q23.2 Seq+ 62352 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETV6-ITLN1 ETV6 chr12 11803094 - ITLN1 chr1 160854673 - Exonic hg19 SKCM TCGA-W3-AA1V-06B 110 69 CDS-5'UTR Inter-chr p13.2 Tumor suppressor gene Transcription factor q23.3 Seq+ 62353 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12022903 - NTRK3 chr15 88483984 - Exonic hg19 BRCA TCGA-AO-A03U-01B 52 40 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 62354 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12006495 - NTRK3 chr15 88576276 - Exonic hg19 THCA TCGA-CE-A27D-01A 33 10 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 62355 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12022903 - NTRK3 chr15 88483984 - Exonic hg19 COAD TCGA-CK-5913-01A 26 20 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 62356 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12022903 - NTRK3 chr15 88483984 - Exonic hg19 COAD TCGA-CK-5916-01A 12 8 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 62357 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12006495 - NTRK3 chr15 88576276 - Exonic hg19 THCA TCGA-DJ-A3UV-01A 26 14 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 62358 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12006495 - NTRK3 chr15 88576276 - Exonic hg19 THCA TCGA-DJ-A4V0-01A 11 8 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 62359 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12006495 - NTRK3 chr15 88576276 - Exonic hg19 THCA TCGA-E8-A438-01A 15 10 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 62360 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12022903 - NTRK3 chr15 88483984 - Exonic hg19 SKCM TCGA-EB-A51B-01A 18 14 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 62361 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12006495 - NTRK3 chr15 88576276 - Exonic hg19 THCA TCGA-EL-A3ZN-01A 13 13 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 62362 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12006495 - NTRK3 chr15 88576276 - Exonic hg19 THCA TCGA-FE-A3PD-01A 44 22 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 62363 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETV6-PDE6H ETV6 chr12 11803094 - PDE6H chr12 15130906 + Exonic hg19 PRAD TCGA-J4-AATZ-01A 75 65 CDS-5'UTR Intra-chr p13.2 Tumor suppressor gene Transcription factor p12.3 Seq+ 62364 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETV6-PLEKHG6 ETV6 chr12 11803094 - PLEKHG6 chr12 6424171 + Exonic hg19 LUAD TCGA-62-A46O-01A 12 14 In-Frame Intra-chr p13.2 Tumor suppressor gene Transcription factor p13.31 Seq+ 62365 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ETV6-YTHDF2 ETV6 chr12 11992238 - YTHDF2 chr1 29095441 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 14 375 Out-of-frame Inter-chr p13.2 Tumor suppressor gene Transcription factor p35.3 Seq+ 62366 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EVC-WDR60 EVC chr4 5721100 - WDR60 chr7 158694430 + Exonic hg19 BRCA TCGA-E9-A1R6-01A 3 1 In-Frame Inter-chr p16.2 q36.3 62367 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EVC2-CPM EVC2 chr4 5710013 - CPM chr12 69236109 - Exonic hg19 SARC TCGA-HB-A3YV-01A 3 2 CDS-3'UTR Inter-chr p16.2 q15 62368 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EVI5L-PGPEP1 EVI5L chr19 7895267 - PGPEP1 chr19 18466705 + Exonic hg19 SARC TCGA-DX-A3LW-01A 4 1 5'UTR-CDS Intra-chr p13.2 p13.11 62369 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EVI5L-VAV1 EVI5L chr19 7923217 - VAV1 chr19 6843146 + Exonic hg19 BRCA TCGA-AQ-A54N-01A 32 18 In-Frame Intra-chr p13.2 p13.3 Seq+ 62370 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EVL-EML1 EVL chr14 100551192 - EML1 chr14 100380903 + Exonic hg19 BRCA TCGA-A2-A4S3-01A 12 3 In-Frame Intra-chr q32.2 q32.2 62371 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EVPL-MAP2K6 EVPL chr17 74023182 - MAP2K6 chr17 67501921 + Exonic hg19 BRCA TCGA-E2-A109-01A 61 43 Out-of-frame Intra-chr q25.1 q24.3 STE:STE7 Seq+ 62372 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EVPL-SRP68 EVPL chr17 74019373 - SRP68 chr17 74041467 - Exonic hg19 OV TCGA-04-1517-01A 10 4 In-Frame Intra-chr q25.1 q25.1 Seq+ 62373 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EVPL-SRP68 EVPL chr17 74023182 - SRP68 chr17 74063411 - Exonic hg19 CESC TCGA-HM-A6W2-06A 2 2 In-Frame Intra-chr q25.1 q25.1 Seq+ 62374 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EWSR1-ABR EWSR1 chr22 29669853 - ABR chr17 1028702 - Exonic hg19 HNSC TCGA-CV-7421-01A 6 23 In-Frame Inter-chr q12.2 p13.3 Seq+ 62375 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXD2-GMEB2 EXD2 chr14 69676520 - GMEB2 chr20 62250807 - Exonic hg19 LUAD TCGA-55-8206-01A 2 4 5'UTR-5'UTR Inter-chr q24.1 q13.33 Transcription factor Seq+ 62376 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXD2-RAD51B EXD2 chr14 69695789 - RAD51B chr14 68878141 + Exonic hg19 STAD TCGA-CG-4449-01A 7 4 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 62377 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXD3-PNPLA7 EXD3 chr9 140317566 - PNPLA7 chr9 140358908 - Exonic hg19 LUSC TCGA-46-3765-01A 7 52 5'UTR-CDS Intra-chr q34.3 q34.3 Seq+ 62378 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOC1-IDO1 EXOC1 chr4 56768704 - IDO1 chr8 39780071 + Exonic hg19 LUAD TCGA-97-8179-01A 5 4 Out-of-frame Inter-chr q12 p11.21 Seq+ 62379 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOC1-XKR3 EXOC1 chr4 56737399 - XKR3 chr22 17288973 - Exonic hg19 OV TCGA-36-1571-01A 2 1 CDS-5'UTR Inter-chr q12 q11.1 Seq+ 62380 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOC2-GCNT2 EXOC2 chr6 532469 - GCNT2 chr6 10493053 + Exonic hg19 SARC TCGA-FX-A3TO-01A 3 7 CDS-5'UTR Intra-chr p25.3 p24.3 Seq+ 62381 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOC2-MDGA1 EXOC2 chr6 693019 - MDGA1 chr6 37612425 - Exonic hg19 SKCM TCGA-ER-A3EV-06A 3 1 5'UTR-CDS Intra-chr p25.3 p21.2 Seq+ 62382 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOC2-OOEP EXOC2 chr6 693019 - OOEP chr6 74079108 - Exonic hg19 BLCA TCGA-SY-A9G5-01A 32 19 5'UTR-CDS Intra-chr p25.3 q13 Seq+ 62383 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOC2-RNF144B EXOC2 chr6 532469 - RNF144B chr6 18439915 + Exonic hg19 UCEC TCGA-B5-A0JN-01A 2 2 Out-of-frame Intra-chr p25.3 p22.3 Seq+ 62384 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOC2-SH3RF3 EXOC2 chr6 693019 - SH3RF3 chr2 109964130 + Exonic hg19 BRCA TCGA-C8-A12U-01A 12 14 5'UTR-CDS Inter-chr p25.3 q13 Seq+ 62385 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOC3-TAGLN EXOC3 chr5 467398 - TAGLN chr11 117070098 + Exonic hg19 SARC TCGA-FX-A3NJ-01A 2 1 Out-of-frame Inter-chr p15.33 q23.3 Tumor suppressor gene 62386 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOC4-CHCHD3 EXOC4 chr7 133059756 - CHCHD3 chr7 132754989 - Exonic hg19 COAD TCGA-G4-6626-01A 5 24 In-Frame Intra-chr q33 q33 Transcription factor Seq+ 62387 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOC4-PTAFR EXOC4 chr7 133314894 - PTAFR chr1 28477570 - Exonic hg19 LUAD TCGA-05-4398-01A 9 15 CDS-5'UTR Inter-chr q33 p35.3 Seq+ 62388 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOC4-RAB4B EXOC4 chr7 133002144 - RAB4B chr19 41285924 + Exonic hg19 GBM TCGA-19-0957-02A 3 2 In-Frame Inter-chr q33 q13.2 Seq+ 62389 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOC4-SLC25A13 EXOC4 chr7 133059756 - SLC25A13 chr7 95776008 - Exonic hg19 BRCA TCGA-AR-A256-01A 38 25 In-Frame Intra-chr q33 q21.3 Seq+ 62390 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOC4-SUPT3H EXOC4 chr7 133164892 - SUPT3H chr6 44797594 - Exonic hg19 LUAD TCGA-86-8585-01A 20 13 Out-of-frame Inter-chr q33 p21.1 Seq+ 62391 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOC4-WBSCR17 EXOC4 chr7 133002144 - WBSCR17 chr7 71175746 + Exonic hg19 SARC TCGA-DX-A1L0-01A 4 1 Out-of-frame Intra-chr q33 q11.22 62392 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOC5-SLC35F4 EXOC5 chr14 57735340 - SLC35F4 chr14 58060842 - Exonic hg19 PRAD TCGA-HC-8265-01A 2 1 Out-of-frame Intra-chr q22.3 q23.1 Seq+ 62393 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOC6-DTNB EXOC6 chr10 94608391 - DTNB chr2 25611230 - Exonic hg19 HNSC TCGA-BB-7861-01A 3 1 Out-of-frame Inter-chr q23.33 p23.3 62394 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOC6-EYS EXOC6 chr10 94774024 - EYS chr6 64776384 - Exonic hg19 THYM TCGA-X7-A8M0-01A 2 1 Out-of-frame Inter-chr q23.33 q12 62395 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOC6B-CASP10 EXOC6B chr2 72562076 - CASP10 chr2 202072798 + Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 4 2 In-Frame Intra-chr p13.2 q33.1 62396 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOC6B-HNRPLL EXOC6B chr2 72945232 - HNRPLL chr2 38800569 - Exonic hg19 BLCA TCGA-DK-A1A5-01A 3 1 Out-of-frame Intra-chr p13.2 62397 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOC6B-PCCB EXOC6B chr2 73052927 - PCCB chr3 136045645 + Exonic hg19 CESC TCGA-VS-A953-01A 21 21 Out-of-frame Inter-chr p13.2 q22.3 Seq+ 62398 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOC6B-SFXN5 EXOC6B chr2 72945232 - SFXN5 chr2 73172228 - Exonic hg19 LUAD TCGA-64-1680-01A 2 1 In-Frame Intra-chr p13.2 p13.2 Seq+ 62399 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOC6B-SFXN5 EXOC6B chr2 72945232 - SFXN5 chr2 73250343 - Exonic hg19 BRCA TCGA-A7-A13D-01A 5 8 In-Frame Intra-chr p13.2 p13.2 Seq+ 62400 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOC6B-SFXN5 EXOC6B chr2 73052927 - SFXN5 chr2 73198814 - Exonic hg19 BRCA TCGA-C8-A26Y-01A 5 5 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 62401 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOC6B-SLC4A5 EXOC6B chr2 72945232 - SLC4A5 chr2 74460690 - Exonic hg19 ESCA TCGA-LN-A7HV-01A 3 2 In-Frame Intra-chr p13.2 p13.1 62402 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOC7-FOXJ1 EXOC7 chr17 74093877 - FOXJ1 chr17 74134201 - Exonic hg19 LUAD TCGA-86-8673-01A 44 37 Out-of-frame Intra-chr q25.1 q25.1 Transcription factor Seq+ 62403 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOC7-USP22 EXOC7 chr17 74097352 - USP22 chr17 20911309 - Exonic hg19 BRCA TCGA-EW-A2FS-01A 3 7 Out-of-frame Intra-chr q25.1 p11.2 Seq+ 62404 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOSC10-MTOR EXOSC10 chr1 11139768 - MTOR chr1 11190834 - Exonic hg19 ACC TCGA-OR-A5J7-01A 7 9 In-Frame Intra-chr p36.22 p36.22 Oncogene Seq+ 62405 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOSC4-NEIL2 EXOSC4 chr8 145133802 - NEIL2 chr8 11637107 + Exonic hg19 MESO TCGA-UD-AAC4-01A 38 24 In-Frame Intra-chr q24.3 p23.1 Seq+ 62406 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOSC5-FCGBP EXOSC5 chr19 41893419 - FCGBP chr19 40354532 - Exonic hg19 LIHC TCGA-DD-AADC-01A 3 5 In-Frame Intra-chr q13.2 Seq+ 62407 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOSC5-LEUTX EXOSC5 chr19 41903086 - LEUTX chr19 40275167 + Exonic hg19 LGG TCGA-DU-8166-01A 4 2 CDS-5'UTR Intra-chr q13.2 Transcription factor 62408 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOSC7-ZDHHC3 EXOSC7 chr3 45017826 - ZDHHC3 chr3 45000952 - Exonic hg19 LUSC TCGA-O2-A5IB-01A 51 37 5'UTR-5'UTR Intra-chr p21.31 Seq+ 62409 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXOSC9-MAPK10 EXOSC9 chr4 122728777 - MAPK10 chr4 86952584 - Exonic hg19 LIHC TCGA-2Y-A9GZ-01A 4 10 Out-of-frame Intra-chr q27 q21.3 Tumor suppressor gene Seq+ 62410 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXT1-FAM155A EXT1 chr8 119122324 - FAM155A chr13 107823134 - Exonic hg19 BLCA TCGA-BT-A3PK-01A 9 4 Out-of-frame Inter-chr q24.11 Oncogene Tumor suppressor gene q33.3 Seq+ 62411 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXT1-OC90 EXT1 chr8 118830674 - OC90 chr8 133045411 - Exonic hg19 LUAD TCGA-05-4422-01A 13 2 Out-of-frame Intra-chr q24.11 Oncogene Tumor suppressor gene q24.22 Seq+ 62412 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXT1-RSF1 EXT1 chr8 118825111 - RSF1 chr11 77451981 - Exonic hg19 BRCA TCGA-BH-A1EN-01A 26 13 In-Frame Inter-chr q24.11 Oncogene Tumor suppressor gene q14.1 Seq+ 62413 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXT1-SAMD12 EXT1 chr8 119122324 - SAMD12 chr8 119209971 - Exonic hg19 BRCA TCGA-A7-A6VY-01A 3 3 Out-of-frame Intra-chr q24.11 Oncogene Tumor suppressor gene q24.12 Seq+ 62414 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXT1-SAMD12 EXT1 chr8 119122324 - SAMD12 chr8 119209971 - Exonic hg19 HNSC TCGA-CN-5370-01A 11 5 Out-of-frame Intra-chr q24.11 Oncogene Tumor suppressor gene q24.12 Seq+ 62415 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXT1-SAMD12 EXT1 chr8 119122324 - SAMD12 chr8 119209971 - Exonic hg19 PRAD TCGA-EJ-7123-01A 2 3 Out-of-frame Intra-chr q24.11 Oncogene Tumor suppressor gene q24.12 Seq+ 62416 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXT1-SAMD12 EXT1 chr8 119122324 - SAMD12 chr8 119209971 - Exonic hg19 PAAD TCGA-HZ-8637-01A 4 2 Out-of-frame Intra-chr q24.11 Oncogene Tumor suppressor gene q24.12 Seq+ 62417 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXT1-SAMD12 EXT1 chr8 119122324 - SAMD12 chr8 119209971 - Exonic hg19 SARC TCGA-IW-A3M5-01A 6 2 Out-of-frame Intra-chr q24.11 Oncogene Tumor suppressor gene q24.12 Seq+ 62418 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXT1-SAMD12 EXT1 chr8 119122324 - SAMD12 chr8 119391939 - Exonic hg19 LUSC TCGA-L3-A524-01A 3 4 Out-of-frame Intra-chr q24.11 Oncogene Tumor suppressor gene q24.12 Seq+ 62419 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXT1-SAMD12 EXT1 chr8 119122324 - SAMD12 chr8 119209971 - Exonic hg19 UCS TCGA-N7-A4Y8-01A 2 2 Out-of-frame Intra-chr q24.11 Oncogene Tumor suppressor gene q24.12 Seq+ 62420 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXT1-TSNARE1 EXT1 chr8 119122324 - TSNARE1 chr8 143293674 - Exonic hg19 ESCA TCGA-Z6-AAPN-01A 3 19 CDS-3'UTR Intra-chr q24.11 Oncogene Tumor suppressor gene q24.3 Seq+ 62421 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXT1-WDYHV1 EXT1 chr8 119122324 - WDYHV1 chr8 124440164 + Exonic hg19 BLCA TCGA-G2-A2EO-01A 18 15 In-Frame Intra-chr q24.11 Oncogene Tumor suppressor gene q24.13 Seq+ 62422 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXT2-ALKBH3 EXT2 chr11 44135851 - ALKBH3 chr11 43940588 + Exonic hg19 SKCM TCGA-ER-A194-01A 15 15 Out-of-frame Intra-chr p11.2 Oncogene Tumor suppressor gene p11.2 Seq+ 62423 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXT2-ALKBH3 EXT2 chr11 44219568 - ALKBH3 chr11 43940588 + Exonic hg19 PCPG TCGA-QR-A6GW-01A 4 2 Out-of-frame Intra-chr p11.2 Oncogene Tumor suppressor gene p11.2 Seq+ 62424 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXT2-ALX4 EXT2 chr11 44257925 - ALX4 chr11 44289172 - Exonic hg19 BRCA TCGA-B6-A0X7-01A 5 9 Out-of-frame Intra-chr p11.2 Oncogene Tumor suppressor gene p11.2 Transcription factor 62425 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXT2-PRMT10 EXT2 chr11 44151688 - PRMT10 chr4 148601622 - Exonic hg19 LUSC TCGA-85-8354-01A 16 12 In-Frame Inter-chr p11.2 Oncogene Tumor suppressor gene Seq+ 62426 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EXTL3-TMEM66 EXTL3 chr8 28480327 - TMEM66 chr8 29924434 - Exonic hg19 BRCA TCGA-A7-A13E-01A 7 3 5'UTR-CDS Intra-chr p21.1 Tumor suppressor gene 62427 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EYA2-LHX2 EYA2 chr20 45644936 - LHX2 chr9 126776240 + Exonic hg19 LGG TCGA-VM-A8CD-01A 12 6 Out-of-frame Inter-chr q13.12 q33.3 Transcription factor Seq+ 62428 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EYA2-MYLK2 EYA2 chr20 45725807 - MYLK2 chr20 30418622 + Exonic hg19 UCS TCGA-ND-A4WF-01A 29 22 In-Frame Intra-chr q13.12 q11.21 Seq+ 62429 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EYA2-SLC2A10 EYA2 chr20 45644936 - SLC2A10 chr20 45353680 + Exonic hg19 UCEC TCGA-5B-A90C-01A 12 9 In-Frame Intra-chr q13.12 q13.12 Seq+ 62430 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EYA2-SYS1 EYA2 chr20 45725807 - SYS1 chr20 43994259 + Exonic hg19 PRAD TCGA-KK-A5A1-01A 10 5 In-Frame Intra-chr q13.12 q13.12 Seq+ 62431 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EYA3-GUCA1C EYA3 chr1 28415035 - GUCA1C chr3 108639432 - Exonic hg19 LUAD TCGA-49-AAR3-01A 31 19 5'UTR-CDS Inter-chr p35.3 q13.13 Seq+ 62432 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EYA3-GUCA1C EYA3 chr1 28415035 - GUCA1C chr3 108639432 - Exonic hg19 COAD TCGA-5M-AAT6-01A 6 8 5'UTR-CDS Inter-chr p35.3 q13.13 Seq+ 62433 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EYA3-KIAA0247 EYA3 chr1 28362055 - KIAA0247 chr14 70125230 + Exonic hg19 BRCA TCGA-BH-A18V-01A 8 4 CDS-5'UTR Inter-chr p35.3 Seq+ 62434 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EYA3-KIAA0247 EYA3 chr1 28362055 - KIAA0247 chr14 70125230 + Exonic hg19 BRCA TCGA-BH-A18V-06A 6 8 CDS-5'UTR Inter-chr p35.3 Seq+ 62435 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EYA3-POP4 EYA3 chr1 28315046 - POP4 chr19 30104778 + Exonic hg19 BRCA TCGA-A2-A04P-01A 3 1 In-Frame Inter-chr p35.3 q12 Seq+ 62436 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EYA4-MAP3K5 EYA4 chr6 133562887 - MAP3K5 chr6 137026271 - Exonic hg19 SARC TCGA-3B-A9HL-01A 4 6 5'UTR-CDS Intra-chr q23.2 Tumor suppressor gene q23.3 STE:STE11 Seq+ 62437 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EYA4-PKIB EYA4 chr6 133846253 - PKIB chr6 122954428 + Exonic hg19 SARC TCGA-DX-A1KZ-01A 2 3 CDS-5'UTR Intra-chr q23.2 Tumor suppressor gene q22.31 62438 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EYS-BAI3 EYS chr6 66005756 - BAI3 chr6 70034764 + Exonic hg19 PRAD TCGA-YL-A8SR-01B 6 2 Out-of-frame Intra-chr q12 62439 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EYS-KIAA1543 EYS chr6 65300116 - KIAA1543 chr19 7670112 + Exonic hg19 LGG TCGA-TM-A7CF-01A 2 2 Out-of-frame Inter-chr q12 62440 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EYS-KIAA1543 EYS chr6 65300116 - KIAA1543 chr19 7670112 + Exonic hg19 LGG TCGA-TM-A7CF-02A 5 4 Out-of-frame Inter-chr q12 62441 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EYS-STX11 EYS chr6 65596590 - STX11 chr6 144507760 + Exonic hg19 LGG TCGA-TM-A7CF-02A 3 3 CDS-5'UTR Intra-chr q12 q24.2 Seq+ 62442 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EZH1-IGFBP5 EZH1 chr17 40879653 - IGFBP5 chr2 217543802 - Exonic hg19 PRAD TCGA-XQ-A8TA-01A 9 8 Out-of-frame Inter-chr q21.2 Tumor suppressor gene q35 Tumor suppressor gene Seq+ 62443 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EZH1-MAP3K14 EZH1 chr17 40861864 - MAP3K14 chr17 43368131 - Exonic hg19 OV TCGA-13-A5FT-01A 3 11 CDS-5'UTR Intra-chr q21.2 Tumor suppressor gene q21.31 Seq+ 62444 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EZH1-PDSS2 EZH1 chr17 40879653 - PDSS2 chr6 107595431 - Exonic hg19 PCPG TCGA-WB-A81F-01A 19 9 Out-of-frame Inter-chr q21.2 Tumor suppressor gene q21 Tumor suppressor gene Seq+ 62445 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EZH1-TOP2A EZH1 chr17 40854895 - TOP2A chr17 38561135 - Exonic hg19 BRCA TCGA-B6-A0IG-01A 5 3 Out-of-frame Intra-chr q21.2 Tumor suppressor gene q21.2 Seq+ 62446 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EZH1-ZC3H3 EZH1 chr17 40880843 - ZC3H3 chr8 144523290 - Exonic hg19 OV TCGA-36-1574-01A 27 13 In-Frame Inter-chr q21.2 Tumor suppressor gene Seq+ 62447 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EZH2-AUTS2 EZH2 chr7 148543562 - AUTS2 chr7 70227856 + Exonic hg19 LUSC TCGA-34-5928-01A 37 11 Out-of-frame Intra-chr q36.1 Oncogene Tumor suppressor gene q11.22 Seq+ 62448 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EZH2-TMEM176B EZH2 chr7 148581256 - TMEM176B chr7 150493662 - Exonic hg19 LUAD TCGA-49-AAR9-01A 2 4 5'UTR-5'UTR Intra-chr q36.1 Oncogene Tumor suppressor gene q36.1 Seq+ 62449 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EZR-C1orf50 EZR chr6 159239114 - C1orf50 chr1 43239234 + Exonic hg19 OV TCGA-13-1487-01A 4 6 In-Frame Inter-chr q25.3 p34.2 Seq+ 62450 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EZR-RB1CC1 EZR chr6 159206341 - RB1CC1 chr8 53537347 - Exonic hg19 BRCA TCGA-A2-A0CY-01A 32 23 Out-of-frame Inter-chr q25.3 q11.23 Tumor suppressor gene Seq+ 62451 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EZR-ROS1 EZR chr6 159191796 - ROS1 chr6 117645578 - Exonic hg19 LUAD TCGA-55-6986-01A 172 154 In-Frame Intra-chr q25.3 q22.1 Oncogene KB Pub Seq+ 62452 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq EZR-ROS1 EZR chr6 159191796 - ROS1 chr6 117645578 - Exonic hg19 LUAD TCGA-NJ-A7XG-01A 170 169 In-Frame Intra-chr q25.3 q22.1 Oncogene KB Pub Seq+ 62453 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq F11R-NOS1AP F11R chr1 160990800 - NOS1AP chr1 162324977 + Exonic hg19 LUAD TCGA-78-7146-01A 69 48 In-Frame Intra-chr q23.3 q23.3 Seq+ 62454 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq F11R-USF1 F11R chr1 160990800 - USF1 chr1 161013150 - Exonic hg19 CESC TCGA-C5-A7CO-01A 5 2 CDS-5'UTR Intra-chr q23.3 q23.3 Transcription factor Seq+ 62455 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq F5-SCYL3 F5 chr1 169505744 - SCYL3 chr1 169858031 - Exonic hg19 LIHC TCGA-DD-AAE4-01A 6 3 CDS-5'UTR Intra-chr q24.2 q24.2 Other:SCY1 Seq+ 62456 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FA2H-KARS FA2H chr16 74773921 - KARS chr16 75665753 - Exonic hg19 ESCA TCGA-L5-A8NE-01A 5 53 In-Frame Intra-chr q23.1 q23.1 Seq+ 62457 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAAH-RAD54L FAAH chr1 46872040 - RAD54L chr1 46733131 + Exonic hg19 LUAD TCGA-NJ-A4YF-01A 3 5 In-Frame Intra-chr p33 p34.1 Seq+ 62458 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAF1-CHIA FAF1 chr1 51121114 - CHIA chr1 111857162 + Exonic hg19 BLCA TCGA-UY-A78N-01A 10 6 Out-of-frame Intra-chr p32.3 p13.2 Seq+ 62459 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAF1-DCAF6 FAF1 chr1 51001041 - DCAF6 chr1 168034828 + Exonic hg19 LUAD TCGA-69-7763-01A 5 2 In-Frame Intra-chr p32.3 q24.2 Seq+ 62460 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAF1-EPS15 FAF1 chr1 51171458 - EPS15 chr1 51946986 - Exonic hg19 BLCA TCGA-2F-A9KP-01A 5 3 In-Frame Intra-chr p32.3 p32.3 Seq+ 62461 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAF1-EPS15 FAF1 chr1 51323601 - EPS15 chr1 51946986 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 11 In-Frame Intra-chr p32.3 p32.3 Seq+ 62462 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAF1-HCRTR1 FAF1 chr1 50956260 - HCRTR1 chr1 32098037 + Exonic hg19 BRCA TCGA-E9-A1R7-01A 7 3 CDS-3'UTR Intra-chr p32.3 p35.2 Seq+ 62463 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAF1-HOOK1 FAF1 chr1 51210356 - HOOK1 chr1 60330304 + Exonic hg19 BRCA TCGA-EW-A3U0-01A 3 2 In-Frame Intra-chr p32.3 p32.1 62464 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAF1-ITGB3BP FAF1 chr1 51267303 - ITGB3BP chr1 63974241 - Exonic hg19 BLCA TCGA-4Z-AA84-01A 29 18 In-Frame Intra-chr p32.3 p31.3 Seq+ 62465 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAF1-LRRC7 FAF1 chr1 51323601 - LRRC7 chr1 70257726 + Exonic hg19 BRCA TCGA-BH-A209-01A 9 8 In-Frame Intra-chr p32.3 p31.1 Seq+ 62466 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAF1-NFIA FAF1 chr1 51425439 - NFIA chr1 61818122 + Exonic hg19 BRCA TCGA-BH-A1FC-01A 10 13 Out-of-frame Intra-chr p32.3 p31.3 Transcription factor Seq+ 62467 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAF1-OSBPL9 FAF1 chr1 51425439 - OSBPL9 chr1 52231494 + Exonic hg19 LUSC TCGA-85-8355-01A 6 8 Out-of-frame Intra-chr p32.3 p32.3 Seq+ 62468 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAF1-PTRH2 FAF1 chr1 51121114 - PTRH2 chr17 57775339 - Exonic hg19 BRCA TCGA-BH-A0DX-01A 8 6 CDS-5'UTR Inter-chr p32.3 q23.1 Seq+ 62469 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAF1-TESK2 FAF1 chr1 51121114 - TESK2 chr1 45821121 - Exonic hg19 ESCA TCGA-JY-A6F8-01A 2 36 In-Frame Intra-chr p32.3 p34.1 TKL:LISK Seq+ 62470 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAF1-TTC39A FAF1 chr1 51121114 - TTC39A chr1 51761842 - Exonic hg19 PRAD TCGA-ZG-A9KY-01A 15 6 In-Frame Intra-chr p32.3 p32.3 Seq+ 62471 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM100B-FMN1 FAM100B chr17 74262050 - FMN1 chr15 33261678 - Exonic hg19 SKCM TCGA-WE-A8ZT-06A 26 13 In-Frame Inter-chr 62472 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM100B-TIMP2 FAM100B chr17 74262050 - TIMP2 chr17 76870001 - Exonic hg19 LUSC TCGA-43-2581-01A 69 35 Out-of-frame Intra-chr q25.3 62473 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM100B-ZNF710 FAM100B chr17 74262050 - ZNF710 chr15 90617348 + Exonic hg19 STAD TCGA-BR-4357-01A 56 52 In-Frame Inter-chr q26.1 Transcription factor 62474 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM102A-ARFGEF2 FAM102A chr9 130703160 - ARFGEF2 chr20 47615777 + Exonic hg19 HNSC TCGA-CV-A460-01A 2 2 Out-of-frame Inter-chr q34.11 q13.13 62475 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM102A-C11orf30 FAM102A chr9 130742271 - C11orf30 chr11 76255303 + Exonic hg19 ESCA TCGA-L5-A8NI-01A 9 54 Out-of-frame Inter-chr q34.11 Seq+ 62476 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM102A-NAIF1 FAM102A chr9 130707928 - NAIF1 chr9 130826179 - Exonic hg19 BRCA TCGA-A8-A09A-01A 2 2 In-Frame Intra-chr q34.11 q34.11 Transcription factor Seq+ 62477 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM102A-PHF19 FAM102A chr9 130710350 - PHF19 chr9 123631608 - Exonic hg19 SKCM TCGA-ER-A19E-06A 9 5 Out-of-frame Intra-chr q34.11 q33.2 62478 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM102A-PTGES2 FAM102A chr9 130715854 - PTGES2 chr9 130887720 - Exonic hg19 LUAD TCGA-69-A59K-01A 4 2 In-Frame Intra-chr q34.11 q34.11 Seq+ 62479 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM102A-RAD23B FAM102A chr9 130742271 - RAD23B chr9 110081033 + Exonic hg19 SARC TCGA-K1-A6RU-01A 22 26 Out-of-frame Intra-chr q34.11 q31.2 Tumor suppressor gene Seq+ 62480 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM102A-WDR93 FAM102A chr9 130715854 - WDR93 chr15 90286523 + Exonic hg19 ESCA TCGA-L5-A4OQ-01A 13 122 Out-of-frame Inter-chr q34.11 q26.1 Seq+ 62481 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM102B-SLC25A24 FAM102B chr1 109143308 - SLC25A24 chr1 108728576 - Exonic hg19 BLCA TCGA-BL-A13J-01A 3 1 In-Frame Intra-chr p13.3 Seq+ 62482 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM102B-TRAPPC8 FAM102B chr1 109148874 - TRAPPC8 chr18 29419420 - Exonic hg19 SKCM TCGA-D9-A4Z5-01A 6 2 In-Frame Inter-chr p13.3 q12.1 Seq+ 62483 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM104A-ACLY FAM104A chr17 71223304 - ACLY chr17 40058066 - Exonic hg19 SKCM TCGA-YG-AA3P-06A 9 18 In-Frame Intra-chr q25.1 q21.2 Seq+ 62484 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM104A-CDC42EP4 FAM104A chr17 71228225 - CDC42EP4 chr17 71282751 - Exonic hg19 LUSC TCGA-77-8146-01A 24 15 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 62485 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM104A-CDC42EP4 FAM104A chr17 71223304 - CDC42EP4 chr17 71282751 - Exonic hg19 LUSC TCGA-98-A53A-01A 69 29 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 62486 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM104A-CDC42EP4 FAM104A chr17 71228225 - CDC42EP4 chr17 71282751 - Exonic hg19 UCEC TCGA-FI-A3PX-01A 9 6 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 62487 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM105A-DNAH5 FAM105A chr5 14602441 - DNAH5 chr5 13917365 - Exonic hg19 LIHC TCGA-DD-AAVV-01A 21 18 In-Frame Intra-chr p15.2 p15.2 Seq+ 62488 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM108B1-CCL25 FAM108B1 chr9 74525550 - CCL25 chr19 8117884 + Exonic hg19 PRAD TCGA-XJ-A9DX-01A 32 6 5'UTR-5'UTR Inter-chr p13.2 62489 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM108C1-HMG20A FAM108C1 chr15 80988360 - HMG20A chr15 77750746 + Exonic hg19 LGG TCGA-TM-A7CF-01A 2 3 CDS-5'UTR Intra-chr q24.3 Transcription factor 62490 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM108C1-SCAPER FAM108C1 chr15 81042033 - SCAPER chr15 76763676 - Exonic hg19 LGG TCGA-DU-A7TC-01A 5 4 In-Frame Intra-chr q24.3 62491 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM108C1-SCAPER FAM108C1 chr15 80988360 - SCAPER chr15 77176217 - Exonic hg19 SKCM TCGA-GN-A26A-06A 2 1 CDS-5'UTR Intra-chr q24.3 62492 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM109B-RAI14 FAM109B chr22 42471656 - RAI14 chr5 34686977 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 9 9 5'UTR-5'UTR Inter-chr q13.2 p13.2 Seq+ 62493 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM110B-DIABLO FAM110B chr8 58907365 - DIABLO chr12 122702944 - Exonic hg19 PRAD TCGA-EJ-5526-01A 32 21 5'UTR-CDS Inter-chr q12.1 q24.31 Tumor suppressor gene Seq+ 62494 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM110B-PREX2 FAM110B chr8 58907365 - PREX2 chr8 69103957 + Exonic hg19 PRAD TCGA-V1-A9OL-01A 15 27 5'UTR-CDS Intra-chr q12.1 q13.2 Seq+ 62495 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM111B-GLYATL1 FAM111B chr11 58877179 - GLYATL1 chr11 58714519 + Exonic hg19 BRCA TCGA-OL-A66P-01A 63 19 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 62496 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM111B-MS4A5 FAM111B chr11 58877179 - MS4A5 chr11 60198269 + Exonic hg19 BRCA TCGA-B6-A0IG-01A 159 135 In-Frame Intra-chr q12.1 q12.2 Seq+ 62497 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM114A1-EEPD1 FAM114A1 chr4 38880047 - EEPD1 chr7 36320724 + Exonic hg19 LUSC TCGA-21-1070-01A 3 5 In-Frame Inter-chr p14 p14.2 Seq+ 62498 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM114A1-IQCE FAM114A1 chr4 38937411 - IQCE chr7 2629541 + Exonic hg19 BRCA TCGA-AO-A129-01A 15 7 In-Frame Inter-chr p14 p22.3 Seq+ 62499 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM114A2-BRAF FAM114A2 chr5 153390801 - BRAF chr7 140481493 - Exonic hg19 THCA TCGA-ET-A3BN-01A 6 3 In-Frame Inter-chr q33.2 q34 TKL:RAF Oncogene Seq+ 62500 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM114A2-FBN2 FAM114A2 chr5 153413351 - FBN2 chr5 127609660 - Exonic hg19 SKCM TCGA-D3-A51N-06A 6 3 In-Frame Intra-chr q33.2 q23.3 Seq+ 62501 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM116A-FHIT FAM116A chr3 57678509 - FHIT chr3 59908140 - Exonic hg19 PRAD TCGA-YL-A9WL-01A 3 2 In-Frame Intra-chr p14.2 Tumor suppressor gene 62502 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM117B-ATIC FAM117B chr2 203500511 - ATIC chr2 216177221 + Exonic hg19 BRCA TCGA-BH-A1F0-01A 10 4 In-Frame Intra-chr q33.2 q35 Seq+ 62503 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM117B-UGCG FAM117B chr2 203500511 - UGCG chr9 114676885 + Exonic hg19 LIHC TCGA-ED-A82E-01A 3 1 Out-of-frame Inter-chr q33.2 q31.3 62504 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM118A-UPK3A FAM118A chr22 45706064 - UPK3A chr22 45689062 + Exonic hg19 ESCA TCGA-L5-A4OQ-01A 10 122 5'UTR-CDS Intra-chr q13.31 q13.31 Seq+ 62505 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM118A-VAPB FAM118A chr22 45706064 - VAPB chr20 57014001 + Exonic hg19 SARC TCGA-KD-A5QS-01A 16 10 5'UTR-CDS Inter-chr q13.31 q13.32 Seq+ 62506 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM120A-C9orf89 FAM120A chr9 96214671 - C9orf89 chr9 95875274 + Exonic hg19 STAD TCGA-BR-8289-01A 38 231 Out-of-frame Intra-chr q22.31 Seq+ 62507 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM120A-SUSD1 FAM120A chr9 96289524 - SUSD1 chr9 114804240 - Exonic hg19 SARC TCGA-DX-AATS-01A 9 4 Out-of-frame Intra-chr q22.31 q32 Seq+ 62508 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM120A-WNK2 FAM120A chr9 96261168 - WNK2 chr9 96030909 + Exonic hg19 STAD TCGA-HU-A4GH-01A 6 88 In-Frame Intra-chr q22.31 q22.31 Tumor suppressor gene Seq+ 62509 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM120B-SFI1 FAM120B chr6 170632347 - SFI1 chr22 31942847 + Exonic hg19 CHOL TCGA-W5-AA34-01A 3 1 Out-of-frame Inter-chr q12.2 62510 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM122B-GPC4 FAM122B chrX 133915851 - GPC4 chrX 132458564 - Exonic hg19 BRCA TCGA-AR-A24W-01A 3 4 Out-of-frame Intra-chr q26.3 q26.2 Seq+ 62511 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM125B-MAMDC2 FAM125B chr9 129184227 - MAMDC2 chr9 72833253 + Exonic hg19 SKCM TCGA-ER-A19E-06A 25 7 In-Frame Intra-chr q21.12 62512 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM125B-TG FAM125B chr9 129102909 - TG chr8 134107288 + Exonic hg19 SKCM TCGA-EB-A24D-01A 40 25 In-Frame Inter-chr q24.22 62513 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM125B-TMC1 FAM125B chr9 129157976 - TMC1 chr9 75355035 + Exonic hg19 LUAD TCGA-78-7536-01A 27 11 In-Frame Intra-chr q21.13 62514 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM126A-TRA2A FAM126A chr7 23023563 - TRA2A chr7 23547154 - Exonic hg19 SKCM TCGA-D9-A4Z6-01A 44 25 In-Frame Intra-chr p15.3 p15.3 Seq+ 62515 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM126A-TRA2A FAM126A chr7 23023563 - TRA2A chr7 23547154 - Exonic hg19 SKCM TCGA-D9-A4Z6-06A 44 25 In-Frame Intra-chr p15.3 p15.3 Seq+ 62516 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM126B-ALS2CR12 FAM126B chr2 201936333 - ALS2CR12 chr2 202154508 - Exonic hg19 LUAD TCGA-55-8302-01A 2 1 5'UTR-CDS Intra-chr q33.1 q33.1 62517 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM126B-COQ10B FAM126B chr2 201910219 - COQ10B chr2 198324656 + Exonic hg19 SARC TCGA-DX-A3UF-01A 12 6 5'UTR-CDS Intra-chr q33.1 q33.1 Seq+ 62518 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM129A-NRXN2 FAM129A chr1 184943434 - NRXN2 chr11 64457948 - Exonic hg19 HNSC TCGA-P3-A6SX-01A 3 2 In-Frame Inter-chr q25.3 q13.1 62519 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM129B-C16orf62 FAM129B chr9 130285958 - C16orf62 chr16 19702675 + Exonic hg19 SARC TCGA-DX-A3M1-01A 23 13 In-Frame Inter-chr q34.11 p12.3 Seq+ 62520 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM129B-C9orf103 FAM129B chr9 130341201 - C9orf103 chr9 86243788 + Exonic hg19 ESCA TCGA-V5-AASW-01A 3 9 Out-of-frame Intra-chr q34.11 62521 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM129B-CLDN4 FAM129B chr9 130267622 - CLDN4 chr7 73245193 + Exonic hg19 PRAD TCGA-HC-8265-01A 2 2 3'UTR-5'UTR Inter-chr q34.11 q11.23 62522 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM129B-ERBB3 FAM129B chr9 130267619 - ERBB3 chr12 56492035 + Exonic hg19 READ TCGA-AG-3725-01A 2 4 Out-of-frame Inter-chr q34.11 q13.2 Oncogene 62523 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM129B-NDUFV1 FAM129B chr9 130267622 - NDUFV1 chr11 67375697 + Exonic hg19 LUAD TCGA-95-7039-01A 2 5 Out-of-frame Inter-chr q34.11 q13.2 62524 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM129B-OLFM1 FAM129B chr9 130331099 - OLFM1 chr9 137982041 + Exonic hg19 BRCA TCGA-A8-A08X-01A 65 112 Out-of-frame Intra-chr q34.11 q34.3 Seq+ 62525 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM129B-PYROXD1 FAM129B chr9 130331099 - PYROXD1 chr12 21593302 + Exonic hg19 BRCA TCGA-A2-A04T-01A 2 4 Out-of-frame Inter-chr q34.11 p12.1 Seq+ 62526 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM129B-SEC16A FAM129B chr9 130331099 - SEC16A chr9 139342613 - Exonic hg19 BRCA TCGA-A8-A08X-01A 21 36 Out-of-frame Intra-chr q34.11 q34.3 Seq+ 62527 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM129B-SNRNP25 FAM129B chr9 130279136 - SNRNP25 chr16 105777 + Exonic hg19 SKCM TCGA-D3-A8GC-06A 27 8 In-Frame Inter-chr q34.11 p13.3 Seq+ 62528 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM131A-NAA50 FAM131A chr3 184060648 - NAA50 chr3 113442939 - Exonic hg19 BRCA TCGA-AO-A0JM-01A 3 2 Out-of-frame Intra-chr q27.1 q13.31 Seq+ 62529 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM133B-CDK6 FAM133B chr7 92219582 - CDK6 chr7 92463004 - Exonic hg19 LUAD TCGA-44-7670-01A 2 6 5'UTR-5'UTR Intra-chr q21.2 q21.2 CMGC:CDK Oncogene Tumor suppressor gene KB Pub Seq+ 62530 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM134B-ANKH FAM134B chr5 16565872 - ANKH chr5 14769300 - Exonic hg19 SKCM TCGA-FS-A1ZG-06A 3 9 Out-of-frame Intra-chr p15.2 Seq+ 62531 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM134B-SLC6A19 FAM134B chr5 16481118 - SLC6A19 chr5 1208861 + Exonic hg19 STAD TCGA-BR-7959-01A 2 5 In-Frame Intra-chr p15.33 62532 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM134B-SNTG2 FAM134B chr5 16565872 - SNTG2 chr2 1312266 + Exonic hg19 SKCM TCGA-D3-A3CF-06A 8 7 Out-of-frame Inter-chr Seq+ 62533 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM134B-TERT FAM134B chr5 16508687 - TERT chr5 1282739 - Exonic hg19 KIRP TCGA-UZ-A9PN-01A 42 27 Out-of-frame Intra-chr p15.33 Oncogene Seq+ 62534 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM134B-TPPP FAM134B chr5 16565872 - TPPP chr5 678179 - Exonic hg19 PRAD TCGA-XQ-A8TA-01A 3 6 CDS-5'UTR Intra-chr p15.33 Seq+ 62535 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM134C-AP2B1 FAM134C chr17 40738783 - AP2B1 chr17 34001195 + Exonic hg19 ESCA TCGA-L5-A8NH-01A 10 83 In-Frame Intra-chr q12 Seq+ 62536 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM134C-KIAA0100 FAM134C chr17 40761104 - KIAA0100 chr17 26965112 - Exonic hg19 SARC TCGA-DX-A48N-01A 5 5 Out-of-frame Intra-chr q11.2 Seq+ 62537 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM135A-C6orf163 FAM135A chr6 71138122 - C6orf163 chr6 88074679 + Exonic hg19 KIRC TCGA-G6-A8L8-01A 3 1 In-Frame Intra-chr q13 q15 62538 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM135A-FBXL4 FAM135A chr6 71232289 - FBXL4 chr6 99375698 - Exonic hg19 SARC TCGA-WK-A8XY-01A 2 1 CDS-5'UTR Intra-chr q13 q16.2 62539 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM135A-GPR114 FAM135A chr6 71212494 - GPR114 chr16 57595968 + Exonic hg19 UCEC TCGA-AJ-A3IA-01A 4 4 CDS-5'UTR Inter-chr q13 Seq+ 62540 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM135A-LAMA2 FAM135A chr6 71162274 - LAMA2 chr6 129371063 + Exonic hg19 ESCA TCGA-M9-A5M8-01A 5 34 In-Frame Intra-chr q13 q22.33 Seq+ 62541 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM13B-CDC25C FAM13B chr5 137368471 - CDC25C chr5 137627805 - Exonic hg19 PRAD TCGA-CH-5740-01A 4 4 5'UTR-CDS Intra-chr q31.2 q31.2 Seq+ 62542 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM13C-FAM149B1 FAM13C chr10 61011335 - FAM149B1 chr10 74934445 + Exonic hg19 GBM TCGA-28-5204-01A 2 5 In-Frame Intra-chr q21.1 q22.2 Seq+ 62543 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM13C-S100P FAM13C chr10 61112030 - S100P chr4 6698620 + Exonic hg19 PRAD TCGA-EJ-8474-01A 106 76 In-Frame Inter-chr q21.1 p16.1 Seq+ 62544 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM13C-ZNF365 FAM13C chr10 61011335 - ZNF365 chr10 64382863 + Exonic hg19 BLCA TCGA-BT-A2LA-01A 7 3 Out-of-frame Intra-chr q21.1 q21.2 Transcription factor Seq+ 62545 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM149B1-ADK FAM149B1 chr10 74970196 - ADK chr10 76349040 + Exonic hg19 GBM TCGA-28-5204-01A 2 3 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 62546 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM149B1-KCNMA1 FAM149B1 chr10 74970196 - KCNMA1 chr10 78778857 - Exonic hg19 BRCA TCGA-AO-A03P-01A 11 17 Out-of-frame Intra-chr q22.2 q22.3 Seq+ 62547 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM155A-FGF14 FAM155A chr13 108518030 - FGF14 chr13 102379160 - Exonic hg19 LUSC TCGA-43-2576-01A 2 4 In-Frame Intra-chr q33.3 q33.1 Seq+ 62548 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM155A-TUBGCP2 FAM155A chr13 108518030 - TUBGCP2 chr10 135116484 - Exonic hg19 KIRC TCGA-B0-4688-01A 2 1 CDS-5'UTR Inter-chr q33.3 q26.3 Seq+ 62549 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM157A-C9 FAM157A chr3 197894742 - C9 chr5 39316131 - Exonic hg19 BRCA TCGA-E9-A1R7-01A 7 1 Out-of-frame Inter-chr q29 p13.1 Seq+ 62550 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM160A1-C4orf27 FAM160A1 chr4 152330617 - C4orf27 chr4 170674986 - Exonic hg19 HNSC TCGA-D6-A6EO-01A 10 15 5'UTR-CDS Intra-chr q31.3 Seq+ 62551 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM160A1-CCNA2 FAM160A1 chr4 152403800 - CCNA2 chr4 122742246 - Exonic hg19 LIHC TCGA-BC-A3KG-01A 25 10 5'UTR-CDS Intra-chr q31.3 q27 Seq+ 62552 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM160A1-DDX60 FAM160A1 chr4 152403800 - DDX60 chr4 169146827 - Exonic hg19 BRCA TCGA-AN-A0XN-01A 5 3 5'UTR-CDS Intra-chr q31.3 q32.3 Seq+ 62553 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM160A1-IL15 FAM160A1 chr4 152510078 - IL15 chr4 142653891 + Exonic hg19 BRCA TCGA-AN-A04C-01A 31 35 In-Frame Intra-chr q31.3 q31.21 Seq+ 62554 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM160A2-APBB1 FAM160A2 chr11 6255774 - APBB1 chr11 6432591 - Exonic hg19 OV TCGA-23-2077-01A 2 4 5'UTR-5'UTR Intra-chr p15.4 p15.4 Seq+ 62555 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM160A2-PIGU FAM160A2 chr11 6245609 - PIGU chr20 33176411 - Exonic hg19 LIHC TCGA-DD-A73C-01A 8 3 In-Frame Inter-chr p15.4 q11.22 62556 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM160B1-ADK FAM160B1 chr10 116593161 - ADK chr10 76349040 + Exonic hg19 PCPG TCGA-WB-A81S-01A 47 26 In-Frame Intra-chr q25.3 q22.2 Seq+ 62557 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM160B1-SHROOM3 FAM160B1 chr10 116596005 - SHROOM3 chr4 77476762 + Exonic hg19 UCEC TCGA-AP-A3K1-01A 9 3 In-Frame Inter-chr q25.3 q21.1 Seq+ 62558 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM160B1-VTI1A FAM160B1 chr10 116596005 - VTI1A chr10 114427977 + Exonic hg19 PRAD TCGA-EJ-A46G-01A 24 19 Out-of-frame Intra-chr q25.3 q25.2 Seq+ 62559 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM162A-CASR FAM162A chr3 122103146 - CASR chr3 121980375 + Exonic hg19 LUAD TCGA-91-8499-01A 12 12 Out-of-frame Intra-chr q21.1 q13.33 Seq+ 62560 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM162A-CSTA FAM162A chr3 122103146 - CSTA chr3 122044109 + Exonic hg19 PRAD TCGA-G9-A9S4-01A 127 5 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 62561 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM164A-ANGPT1 FAM164A chr8 79610748 - ANGPT1 chr8 108276579 - Exonic hg19 BLCA TCGA-ZF-A9RL-01A 4 5 Out-of-frame Intra-chr q23.1 62562 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM168A-C2CD3 FAM168A chr11 73179450 - C2CD3 chr11 73796931 - Exonic hg19 LUAD TCGA-44-7660-01A 2 2 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 62563 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM168A-C2CD3 FAM168A chr11 73308968 - C2CD3 chr11 73724570 - Exonic hg19 UCEC TCGA-AX-A2H4-01A 5 1 5'UTR-3'UTR Intra-chr q13.4 q13.4 Seq+ 62564 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM168A-DNAJB13 FAM168A chr11 73308968 - DNAJB13 chr11 73669362 + Exonic hg19 BRCA TCGA-A8-A08I-01A 14 12 5'UTR-CDS Intra-chr q13.4 q13.4 Seq+ 62565 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM168A-OSBPL5 FAM168A chr11 73179450 - OSBPL5 chr11 3129175 - Exonic hg19 SARC TCGA-X6-A8C3-01A 4 4 In-Frame Intra-chr q13.4 p15.4 Seq+ 62566 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM168A-P4HA3 FAM168A chr11 73308968 - P4HA3 chr11 74000175 - Exonic hg19 UCEC TCGA-B5-A3S1-01A 7 2 5'UTR-CDS Intra-chr q13.4 q13.4 Seq+ 62567 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM168A-PPME1 FAM168A chr11 73308968 - PPME1 chr11 73914773 + Exonic hg19 LIHC TCGA-DD-AADY-01A 10 13 5'UTR-CDS Intra-chr q13.4 q13.4 Seq+ 62568 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM168A-PTCRA FAM168A chr11 73308968 - PTCRA chr6 42890765 + Exonic hg19 BRCA TCGA-AR-A24Z-01A 5 3 5'UTR-CDS Inter-chr q13.4 p21.1 Seq+ 62569 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM168A-PXDNL FAM168A chr11 73308968 - PXDNL chr8 52339318 - Exonic hg19 SKCM TCGA-ER-A19T-01A 78 40 5'UTR-CDS Inter-chr q13.4 q11.23 Seq+ 62570 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM168A-PXDNL FAM168A chr11 73308968 - PXDNL chr8 52339318 - Exonic hg19 SKCM TCGA-ER-A19T-06A 27 23 5'UTR-CDS Inter-chr q13.4 q11.23 Seq+ 62571 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM168A-RAB6A FAM168A chr11 73179450 - RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-A2-A0CY-01A 10 8 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 62572 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM168A-RAB6A FAM168A chr11 73308968 - RAB6A chr11 73431944 - Exonic hg19 UCEC TCGA-AJ-A3NH-01A 33 3 5'UTR-CDS Intra-chr q13.4 q13.4 Seq+ 62573 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM168A-RAB6A FAM168A chr11 73308968 - RAB6A chr11 73390765 - Exonic hg19 LUAD TCGA-NJ-A4YF-01A 20 16 5'UTR-CDS Intra-chr q13.4 q13.4 Seq+ 62574 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM168A-SLC13A2 FAM168A chr11 73308968 - SLC13A2 chr17 26816232 + Exonic hg19 BRCA TCGA-AC-A3QQ-01A 2 4 5'UTR-5'UTR Inter-chr q13.4 q11.2 Seq+ 62575 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM168A-SNX29 FAM168A chr11 73308968 - SNX29 chr16 12571576 + Exonic hg19 GBM TCGA-06-0125-02A 4 10 5'UTR-CDS Inter-chr q13.4 p13.13 Seq+ 62576 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM168A-SYT12 FAM168A chr11 73122439 - SYT12 chr11 66807282 + Exonic hg19 SARC TCGA-HS-A5N8-01A 10 8 In-Frame Intra-chr q13.4 q13.2 Seq+ 62577 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM168A-TMEM135 FAM168A chr11 73308968 - TMEM135 chr11 86778736 + Exonic hg19 LUSC TCGA-94-7557-01A 2 2 5'UTR-5'UTR Intra-chr q13.4 q14.2 62578 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM168A-UVRAG FAM168A chr11 73308968 - UVRAG chr11 75572791 + Exonic hg19 BRCA TCGA-E2-A15A-01A 5 5 5'UTR-CDS Intra-chr q13.4 q13.5 Tumor suppressor gene Seq+ 62579 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM168B-ANKRD42 FAM168B chr2 131840150 - ANKRD42 chr11 82935897 + Exonic hg19 PRAD TCGA-XK-AAIV-01A 20 10 In-Frame Inter-chr q21.1 q14.1 Seq+ 62580 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM169A-ANKRD31 FAM169A chr5 74130251 - ANKRD31 chr5 74364489 - Exonic hg19 BLCA TCGA-BT-A20W-01A 3 1 In-Frame Intra-chr q13.3 q13.3 Seq+ 62581 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM169A-ANKRD31 FAM169A chr5 74134790 - ANKRD31 chr5 74414122 - Exonic hg19 BLCA TCGA-GV-A3QF-01A 4 5 In-Frame Intra-chr q13.3 q13.3 Seq+ 62582 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM171A1-ANKRD26 FAM171A1 chr10 15412955 - ANKRD26 chr10 27318285 - Exonic hg19 LGG TCGA-FG-8185-01A 4 5 Out-of-frame Intra-chr p13 p12.1 Seq+ 62583 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM171B-KYNU FAM171B chr2 187559138 - KYNU chr2 143642918 + Exonic hg19 PRAD TCGA-YL-A8S8-01A 22 12 CDS-5'UTR Intra-chr q32.1 q22.2 Seq+ 62584 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM172A-EFNA5 FAM172A chr5 93447216 - EFNA5 chr5 106763210 - Exonic hg19 BRCA TCGA-D8-A1XZ-01A 29 16 5'UTR-CDS Intra-chr q15 Tumor suppressor gene q21.3 Tumor suppressor gene Seq+ 62585 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM172A-ERAP2 FAM172A chr5 93386436 - ERAP2 chr5 96251392 + Exonic hg19 KIRC TCGA-BP-5004-01A 3 6 Out-of-frame Intra-chr q15 Tumor suppressor gene q15 Seq+ 62586 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM172A-FHIT FAM172A chr5 93294482 - FHIT chr3 59738047 - Exonic hg19 KIRC TCGA-B2-4101-01A 33 34 In-Frame Inter-chr q15 Tumor suppressor gene p14.2 Tumor suppressor gene Seq+ 62587 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM172A-KIAA0825 FAM172A chr5 93386436 - KIAA0825 chr5 93489829 - Exonic hg19 LUAD TCGA-05-4418-01A 2 2 Out-of-frame Intra-chr q15 Tumor suppressor gene q15 Seq+ 62588 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM172A-KIAA0825 FAM172A chr5 93386436 - KIAA0825 chr5 93918288 - Exonic hg19 BRCA TCGA-A7-A26F-01A 4 3 CDS-5'UTR Intra-chr q15 Tumor suppressor gene q15 Seq+ 62589 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM172A-KIAA0825 FAM172A chr5 93217176 - KIAA0825 chr5 93489829 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 2 2 Out-of-frame Intra-chr q15 Tumor suppressor gene q15 Seq+ 62590 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM172A-MCTP1 FAM172A chr5 93386436 - MCTP1 chr5 94353188 - Exonic hg19 LIHC TCGA-ED-A82E-01A 24 14 In-Frame Intra-chr q15 Tumor suppressor gene q15 Seq+ 62591 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM172A-PRR16 FAM172A chr5 93294482 - PRR16 chr5 120021649 + Exonic hg19 COAD TCGA-CM-4747-01A 12 12 In-Frame Intra-chr q15 Tumor suppressor gene q23.1 Seq+ 62592 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM174B-LRRC49 FAM174B chr15 93198546 - LRRC49 chr15 71300718 + Exonic hg19 LUSC TCGA-90-A4EE-01A 4 1 In-Frame Intra-chr q26.1 q23 62593 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM174B-PHF20 FAM174B chr15 93198546 - PHF20 chr20 34430495 + Exonic hg19 UCEC TCGA-A5-A7WK-01A 12 13 In-Frame Inter-chr q26.1 q11.22 Transcription factor Seq+ 62594 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM177A1-IQSEC3 FAM177A1 chr14 35546422 - IQSEC3 chr12 271092 + Exonic hg19 BRCA TCGA-C8-A132-01A 13 8 In-Frame Inter-chr q13.2 Seq+ 62595 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM179B-KCNK13 FAM179B chr14 45523752 - KCNK13 chr14 90650455 + Exonic hg19 BLCA TCGA-2F-A9KO-01A 4 9 Out-of-frame Intra-chr q32.11 Seq+ 62596 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM179B-STYX FAM179B chr14 45433670 - STYX chr14 53211570 + Exonic hg19 BLCA TCGA-XF-AAMW-01A 2 2 In-Frame Intra-chr q22.1 62597 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM180A-AHCYL2 FAM180A chr7 135421847 - AHCYL2 chr7 129019479 + Exonic hg19 SARC TCGA-DX-A1KX-01A 14 14 In-Frame Intra-chr q33 q32.1 Seq+ 62598 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM188A-CACNB2 FAM188A chr10 15902205 - CACNB2 chr10 18787284 + Exonic hg19 LGG TCGA-DB-A4XE-01A 2 4 Out-of-frame Intra-chr Tumor suppressor gene p12.33 62599 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM188B-C7orf10 FAM188B chr7 30811172 - C7orf10 chr7 40789033 + Exonic hg19 PRAD TCGA-EJ-7218-01B 4 3 In-Frame Intra-chr 62600 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM188B-HIBADH FAM188B chr7 30821828 - HIBADH chr7 27672064 - Exonic hg19 ESCA TCGA-JY-A6FH-01A 3 8 Out-of-frame Intra-chr p15.2 62601 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM188B-ZNRF2 FAM188B chr7 30821828 - ZNRF2 chr7 30405651 + Exonic hg19 ESCA TCGA-2H-A9GN-01A 3 17 CDS-3'UTR Intra-chr p14.3 Seq+ 62602 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM189A1-GABRG3 FAM189A1 chr15 29544572 - GABRG3 chr15 27571956 + Exonic hg19 BLCA TCGA-FD-A43P-01A 11 9 In-Frame Intra-chr q12 Seq+ 62603 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM190A-AFF1 FAM190A chr4 91048982 - AFF1 chr4 87967318 + Exonic hg19 PRAD TCGA-YJ-A8SW-01A 12 8 5'UTR-CDS Intra-chr q21.3 Oncogene 62604 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM190A-BMP2K FAM190A chr4 91321280 - BMP2K chr4 79754736 + Exonic hg19 BLCA TCGA-LT-A5Z6-01A 10 9 Out-of-frame Intra-chr q21.21 62605 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM190A-HERC3 FAM190A chr4 91048982 - HERC3 chr4 89599115 + Exonic hg19 UCEC TCGA-EY-A1GX-01A 4 6 5'UTR-CDS Intra-chr q22.1 62606 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM190A-MMRN1 FAM190A chr4 91048982 - MMRN1 chr4 90848946 + Exonic hg19 LUAD TCGA-05-4420-01A 3 5 5'UTR-CDS Intra-chr q22.1 62607 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM190A-MMRN1 FAM190A chr4 91048982 - MMRN1 chr4 90830427 + Exonic hg19 LUSC TCGA-46-3768-01A 14 2 5'UTR-CDS Intra-chr q22.1 62608 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM190A-MMRN1 FAM190A chr4 91048982 - MMRN1 chr4 90815875 + Exonic hg19 COAD TCGA-A6-6649-01A 3 1 Out-of-frame Intra-chr q22.1 62609 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM190A-MMRN1 FAM190A chr4 91234198 - MMRN1 chr4 90844319 + Exonic hg19 BRCA TCGA-A7-A26G-01A 2 2 Out-of-frame Intra-chr q22.1 62610 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM190A-MMRN1 FAM190A chr4 91048982 - MMRN1 chr4 90872756 + Exonic hg19 BRCA TCGA-A8-A07O-01A 12 13 5'UTR-CDS Intra-chr q22.1 62611 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM190A-MMRN1 FAM190A chr4 91048982 - MMRN1 chr4 90815875 + Exonic hg19 UCEC TCGA-AJ-A23N-01A 17 4 Out-of-frame Intra-chr q22.1 62612 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM190A-MMRN1 FAM190A chr4 91645142 - MMRN1 chr4 90815875 + Exonic hg19 PRAD TCGA-EJ-A65J-01A 2 4 Out-of-frame Intra-chr q22.1 62613 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM190A-MMRN1 FAM190A chr4 91389505 - MMRN1 chr4 90830427 + Exonic hg19 BLCA TCGA-FD-A3SJ-01A 4 1 In-Frame Intra-chr q22.1 62614 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM190A-MMRN1 FAM190A chr4 91048982 - MMRN1 chr4 90830427 + Exonic hg19 BLCA TCGA-H4-A2HO-01A 6 2 5'UTR-CDS Intra-chr q22.1 62615 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM190A-MMRN1 FAM190A chr4 91048982 - MMRN1 chr4 90844319 + Exonic hg19 ESCA TCGA-L7-A6VZ-01A 2 9 5'UTR-CDS Intra-chr q22.1 62616 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM190A-MMRN1 FAM190A chr4 91048982 - MMRN1 chr4 90815875 + Exonic hg19 SKCM TCGA-RP-A6K9-06A 2 1 Out-of-frame Intra-chr q22.1 62617 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM190A-SPARCL1 FAM190A chr4 91389505 - SPARCL1 chr4 88394955 - Exonic hg19 STAD TCGA-VQ-AA68-01A 2 10 Out-of-frame Intra-chr q22.1 Tumor suppressor gene Seq+ 62618 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM190A-WDFY3 FAM190A chr4 91048982 - WDFY3 chr4 85696291 - Exonic hg19 PRAD TCGA-TP-A8TT-01A 8 2 5'UTR-CDS Intra-chr q21.23 62619 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM192A-C16orf62 FAM192A chr16 57219733 - C16orf62 chr16 19663298 + Exonic hg19 BRCA TCGA-BH-A0RX-01A 8 5 5'UTR-CDS Intra-chr q13 p12.3 Seq+ 62620 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM192A-CCDC102A FAM192A chr16 57219733 - CCDC102A chr16 57555088 - Exonic hg19 STAD TCGA-CG-4475-01A 4 15 5'UTR-CDS Intra-chr q13 q21 Seq+ 62621 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM193A-NMU FAM193A chr4 2665015 - NMU chr4 56496627 - Exonic hg19 UVM TCGA-YZ-A983-01A 7 4 Out-of-frame Intra-chr p16.3 q12 Seq+ 62622 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM193A-PPP2R2C FAM193A chr4 2632896 - PPP2R2C chr4 6335458 - Exonic hg19 LGG TCGA-DH-A669-01A 10 4 Out-of-frame Intra-chr p16.3 p16.1 Tumor suppressor gene Seq+ 62623 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM193A-PPP2R2C FAM193A chr4 2632896 - PPP2R2C chr4 6335458 - Exonic hg19 LGG TCGA-DH-A669-02A 2 1 Out-of-frame Intra-chr p16.3 p16.1 Tumor suppressor gene Seq+ 62624 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM193A-TBC1D10C FAM193A chr4 2628304 - TBC1D10C chr11 67171662 + Exonic hg19 PRAD TCGA-ZG-A8QZ-01A 8 1 5'UTR-5'UTR Inter-chr p16.3 q13.2 62625 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM193A-TNIP2 FAM193A chr4 2702271 - TNIP2 chr4 2749672 - Exonic hg19 LUSC TCGA-21-1082-01A 41 15 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 62626 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM193A-ZFYVE28 FAM193A chr4 2665015 - ZFYVE28 chr4 2343342 - Exonic hg19 STAD TCGA-BR-8060-01A 3 16 In-Frame Intra-chr p16.3 p16.3 62627 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM193B-SGCD FAM193B chr5 176958283 - SGCD chr5 155935611 + Exonic hg19 READ TCGA-CI-6622-01A 2 3 3'UTR-CDS Intra-chr q35.3 q33.2 Seq+ 62628 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM195A-CCT5 FAM195A chr16 698474 - CCT5 chr5 10250033 + Exonic hg19 COAD TCGA-A6-5667-01A 2 12 Out-of-frame Inter-chr p15.2 62629 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM195A-RAB11FIP3 FAM195A chr16 692249 - RAB11FIP3 chr16 532525 + Exonic hg19 OV TCGA-13-1495-01A 4 6 Out-of-frame Intra-chr Seq+ 62630 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM19A2-IKZF4 FAM19A2 chr12 62585040 - IKZF4 chr12 56418838 + Exonic hg19 ACC TCGA-OR-A5K9-01A 5 5 5'UTR-CDS Intra-chr q14.1 q13.2 Transcription factor Seq+ 62631 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM19A2-KCNMB4 FAM19A2 chr12 62417433 - KCNMB4 chr12 70824265 + Exonic hg19 BRCA TCGA-C8-A12U-01A 3 4 5'UTR-CDS Intra-chr q14.1 q15 Seq+ 62632 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM19A2-KRR1 FAM19A2 chr12 62585040 - KRR1 chr12 75902226 - Exonic hg19 SARC TCGA-DX-AB35-01A 6 3 5'UTR-CDS Intra-chr q14.1 q21.2 62633 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM19A2-OOEP FAM19A2 chr12 62417433 - OOEP chr6 74079108 - Exonic hg19 BRCA TCGA-E2-A9RU-01A 3 3 5'UTR-CDS Inter-chr q14.1 q13 62634 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM19A2-RP11-362K2.2 FAM19A2 chr12 62147403 - RP11-362K2.2 chr12 59206196 + Exonic hg19 LGG TCGA-FG-A70Z-01A 3 5 Out-of-frame Intra-chr q14.1 62635 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM19A2-TMBIM4 FAM19A2 chr12 62147403 - TMBIM4 chr12 66547228 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 4 5 Out-of-frame Intra-chr q14.1 q14.3 Seq+ 62636 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM19A4-CACNA2D3 FAM19A4 chr3 68981391 - CACNA2D3 chr3 54786626 + Exonic hg19 BRCA TCGA-A2-A0CX-01A 10 6 5'UTR-CDS Intra-chr p14.1 p21.1 Tumor suppressor gene Seq+ 62637 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM19A4-LMOD3 FAM19A4 chr3 68929881 - LMOD3 chr3 69171560 - Exonic hg19 ACC TCGA-OR-A5JC-01A 6 6 CDS-5'UTR Intra-chr p14.1 p14.1 Seq+ 62638 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM19A4-TMF1 FAM19A4 chr3 68929881 - TMF1 chr3 69097713 - Exonic hg19 ACC TCGA-OR-A5LB-01A 33 33 In-Frame Intra-chr p14.1 p14.1 Transcription factor Seq+ 62639 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM19A4-UBA3 FAM19A4 chr3 68929881 - UBA3 chr3 69105434 - Exonic hg19 SKCM TCGA-ER-A19E-06A 2 3 Out-of-frame Intra-chr p14.1 p14.1 Seq+ 62640 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM19A5-C14orf49 FAM19A5 chr22 49042558 - C14orf49 chr14 95906412 - Exonic hg19 SKCM TCGA-D9-A4Z5-01A 7 13 Out-of-frame Inter-chr q13.32 62641 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM19A5-TBC1D22A FAM19A5 chr22 49042558 - TBC1D22A chr22 47274549 + Exonic hg19 THYM TCGA-5K-AAAP-01A 16 13 In-Frame Intra-chr q13.32 q13.31 Seq+ 62642 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM19A5-ZFP2 FAM19A5 chr22 49103656 - ZFP2 chr5 178339585 + Exonic hg19 SKCM TCGA-BF-A5EQ-01A 6 2 CDS-5'UTR Inter-chr q13.32 q35.3 Transcription factor 62643 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM200A-CYP3A5 FAM200A chr7 99149477 - CYP3A5 chr7 99264688 - Exonic hg19 ESCA TCGA-L5-A4OS-01A 2 11 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 62644 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM204A-AP1G2 FAM204A chr10 120065401 - AP1G2 chr14 24037279 - Exonic hg19 BLCA TCGA-G2-A3VY-01A 2 1 3'UTR-5'UTR Inter-chr q26.11 q11.2 62645 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM32A-TPM4 FAM32A chr19 16296576 - TPM4 chr19 16186857 + Exonic hg19 OV TCGA-30-1718-01A 11 13 In-Frame Intra-chr p13.11 p13.12 Seq+ 62646 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM35A-SEZ6L2 FAM35A chr10 88856746 - SEZ6L2 chr16 29897070 - Exonic hg19 ESCA TCGA-V5-AASX-01A 5 11 5'UTR-CDS Inter-chr q23.2 p11.2 Seq+ 62647 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM36A-SDCCAG8 FAM36A chr1 245005560 - SDCCAG8 chr1 243504341 + Exonic hg19 BRCA TCGA-BH-A0BF-01A 3 19 Out-of-frame Intra-chr 62648 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM38A-APRT FAM38A chr16 88792692 - APRT chr16 88876248 - Exonic hg19 BRCA TCGA-A8-A09M-01A 100 116 Out-of-frame Intra-chr q24.3 62649 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM38A-CBFA2T3 FAM38A chr16 88798114 - CBFA2T3 chr16 88968064 - Exonic hg19 OV TCGA-57-1586-01A 6 6 Out-of-frame Intra-chr q24.3 Tumor suppressor gene 62650 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM38A-CBFA2T3 FAM38A chr16 88815792 - CBFA2T3 chr16 88949169 - Exonic hg19 CESC TCGA-DS-A1O9-01A 12 3 Out-of-frame Intra-chr q24.3 Tumor suppressor gene 62651 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM38A-CBFA2T3 FAM38A chr16 88815792 - CBFA2T3 chr16 88968064 - Exonic hg19 ESCA TCGA-L5-A4OQ-01A 8 98 Out-of-frame Intra-chr q24.3 Tumor suppressor gene 62652 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM38A-CBFA2T3 FAM38A chr16 88851309 - CBFA2T3 chr16 88958893 - Exonic hg19 SKCM TCGA-Z2-AA3V-06A 2 1 Out-of-frame Intra-chr q24.3 Tumor suppressor gene 62653 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM38A-GALNS FAM38A chr16 88815792 - GALNS chr16 88880933 - Exonic hg19 OV TCGA-04-1517-01A 31 5 Out-of-frame Intra-chr q24.3 62654 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM38A-GALNS FAM38A chr16 88851309 - GALNS chr16 88893246 - Exonic hg19 UCEC TCGA-AJ-A3EM-01A 17 38 Out-of-frame Intra-chr q24.3 62655 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM38A-KLHDC4 FAM38A chr16 88815792 - KLHDC4 chr16 87795646 - Exonic hg19 SARC TCGA-MB-A8JL-01A 7 2 Out-of-frame Intra-chr q24.2 62656 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM38A-MNS1 FAM38A chr16 88851309 - MNS1 chr15 56756445 - Exonic hg19 PRAD TCGA-V1-A8WL-01A 19 21 Out-of-frame Inter-chr q21.3 62657 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM38A-PMFBP1 FAM38A chr16 88851309 - PMFBP1 chr16 72153988 - Exonic hg19 BLCA TCGA-XF-A9SK-01A 4 5 Out-of-frame Intra-chr q22.2 62658 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM38A-TMEM219 FAM38A chr16 88785982 - TMEM219 chr16 29974431 + Exonic hg19 PRAD TCGA-G9-6377-01A 4 3 Out-of-frame Intra-chr p11.2 62659 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM38B-IMPA2 FAM38B chr18 10672687 - IMPA2 chr18 12030342 + Exonic hg19 SARC TCGA-X6-A7W8-01A 14 8 Out-of-frame Intra-chr p11.21 62660 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM40B-CTTNBP2 FAM40B chr7 129100213 - CTTNBP2 chr7 117451043 - Exonic hg19 LGG TCGA-TQ-A7RM-01A 2 1 In-Frame Intra-chr q31.31 62661 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM48A-ATP8A2 FAM48A chr13 37633696 - ATP8A2 chr13 26343184 + Exonic hg19 SARC TCGA-SI-A71O-06A 43 16 5'UTR-CDS Intra-chr q12.13 62662 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM49A-RAD51AP2 FAM49A chr2 16805132 - RAD51AP2 chr2 17692222 - Exonic hg19 PRAD TCGA-YJ-A8SW-01A 26 11 5'UTR-CDS Intra-chr p24.2 p24.2 Seq+ 62663 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM49B-AK5 FAM49B chr8 130915558 - AK5 chr1 77949002 + Exonic hg19 BLCA TCGA-DK-A3IM-01A 9 5 5'UTR-CDS Inter-chr q24.21 p31.1 Seq+ 62664 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM49B-ASAP1 FAM49B chr8 130983189 - ASAP1 chr8 131104389 - Exonic hg19 BRCA TCGA-A8-A06Z-01A 7 2 3'UTR-CDS Intra-chr q24.21 q24.22 Seq+ 62665 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM49B-ASAP1 FAM49B chr8 130983189 - ASAP1 chr8 131165051 - Exonic hg19 CESC TCGA-C5-A7X5-01A 9 11 3'UTR-CDS Intra-chr q24.21 q24.22 Seq+ 62666 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM49B-KAT6A FAM49B chr8 130883621 - KAT6A chr8 41792385 - Exonic hg19 BRCA TCGA-AO-A0J5-01A 25 14 Out-of-frame Intra-chr q24.21 p11.21 Oncogene Seq+ 62667 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM49B-MGAM FAM49B chr8 130915558 - MGAM chr7 141705329 + Exonic hg19 UCEC TCGA-AJ-A3IA-01A 5 4 5'UTR-5'UTR Inter-chr q24.21 Seq+ 62668 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM49B-MRPL13 FAM49B chr8 130915558 - MRPL13 chr8 121455548 - Exonic hg19 BLCA TCGA-E7-A7DV-01A 13 13 5'UTR-CDS Intra-chr q24.21 q24.12 Seq+ 62669 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM49B-PREX2 FAM49B chr8 131028616 - PREX2 chr8 69103957 + Exonic hg19 LUAD TCGA-78-7153-01A 5 6 3'UTR-CDS Intra-chr q24.21 q13.2 Seq+ 62670 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM53A-C1orf201 FAM53A chr4 1670394 - C1orf201 chr1 24710493 - Exonic hg19 BLCA TCGA-S5-A6DX-01A 2 3 In-Frame Inter-chr p16.3 62671 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM53B-C10orf47 FAM53B chr10 126384727 - C10orf47 chr10 11908530 + Exonic hg19 DLBC TCGA-GS-A9TV-01A 9 3 Out-of-frame Intra-chr q26.13 62672 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM53B-KCNN1 FAM53B chr10 126370176 - KCNN1 chr19 18099224 + Exonic hg19 LUAD TCGA-44-7670-01A 23 5 In-Frame Inter-chr q26.13 p13.11 Seq+ 62673 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM53B-LY86 FAM53B chr10 126384727 - LY86 chr6 6654777 + Exonic hg19 OV TCGA-25-1326-01A 2 4 Out-of-frame Inter-chr q26.13 p25.1 Seq+ 62674 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM53B-SGK2 FAM53B chr10 126370176 - SGK2 chr20 42198025 + Exonic hg19 BRCA TCGA-E2-A1IN-01A 3 4 In-Frame Inter-chr q26.13 q13.12 AGC:SGK Seq+ 62675 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM59A-DSG4 FAM59A chr18 29972858 - DSG4 chr18 28970619 + Exonic hg19 STAD TCGA-BR-4366-01A 6 9 In-Frame Intra-chr q12.1 62676 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM59A-FAM38B FAM59A chr18 29972858 - FAM38B chr18 10911226 - Exonic hg19 LUSC TCGA-92-7340-01A 3 1 Out-of-frame Intra-chr 62677 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM59A-GTF2H1 FAM59A chr18 29866994 - GTF2H1 chr11 18380072 + Exonic hg19 BRCA TCGA-A7-A4SE-01A 2 2 Out-of-frame Inter-chr p15.1 62678 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM59A-NEDD4L FAM59A chr18 30050271 - NEDD4L chr18 55833020 + Exonic hg19 PRAD TCGA-G9-6356-01A 2 3 Out-of-frame Intra-chr q21.31 Tumor suppressor gene 62679 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM59A-PTPRM FAM59A chr18 29972858 - PTPRM chr18 7888104 + Exonic hg19 SKCM TCGA-EE-A2GB-06A 30 19 In-Frame Intra-chr p11.23 Seq+ 62680 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM60A-C7orf44 FAM60A chr12 31478958 - C7orf44 chr7 43688251 - Exonic hg19 LUSC TCGA-39-5011-01A 22 4 5'UTR-5'UTR Inter-chr 62681 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM60A-CD27 FAM60A chr12 31478958 - CD27 chr12 6554590 + Exonic hg19 LUAD TCGA-64-5779-01A 41 6 5'UTR-3'UTR Intra-chr p13.31 Seq+ 62682 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM65A-LRRC36 FAM65A chr16 67562817 - LRRC36 chr16 67375860 + Exonic hg19 LUAD TCGA-91-A4BC-01A 2 2 5'UTR-CDS Intra-chr q22.1 Seq+ 62683 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM65A-ZP3 FAM65A chr16 67577372 - ZP3 chr7 76062787 + Exonic hg19 UCS TCGA-NA-A4R1-01A 14 1 Out-of-frame Inter-chr q11.23 Seq+ 62684 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM69A-LRRC8D FAM69A chr1 93426933 - LRRC8D chr1 90309197 + Exonic hg19 HNSC TCGA-BB-4223-01A 9 5 CDS-5'UTR Intra-chr p22.1 p22.2 Seq+ 62685 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM69A-NTNG1 FAM69A chr1 93426933 - NTNG1 chr1 108023233 + Exonic hg19 BRCA TCGA-EW-A2FW-01A 5 4 Out-of-frame Intra-chr p22.1 p13.3 Seq+ 62686 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM70A-FPR2 FAM70A chrX 119438204 - FPR2 chr19 52271898 + Exonic hg19 SARC TCGA-FX-A2QS-01A 4 2 CDS-5'UTR Inter-chr q13.41 62687 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM73A-PIGU FAM73A chr1 78249036 - PIGU chr20 33225789 - Exonic hg19 PRAD TCGA-EJ-7792-01A 2 2 In-Frame Inter-chr q11.22 62688 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM73B-NUP188 FAM73B chr9 131804793 - NUP188 chr9 131760430 + Exonic hg19 BRCA TCGA-A8-A07L-01A 4 3 Out-of-frame Intra-chr q34.11 Seq+ 62689 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM73B-NUP188 FAM73B chr9 131831408 - NUP188 chr9 131755476 + Exonic hg19 BLCA TCGA-UY-A78K-01A 5 1 In-Frame Intra-chr q34.11 Seq+ 62690 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM73B-P4HB FAM73B chr9 131825910 - P4HB chr17 79805223 - Exonic hg19 UCS TCGA-N9-A4PZ-01A 16 27 In-Frame Inter-chr q25.3 Seq+ 62691 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM76A-WDTC1 FAM76A chr1 28075665 - WDTC1 chr1 27631492 + Exonic hg19 LUAD TCGA-44-6778-01A 3 1 In-Frame Intra-chr p35.3 p36.11 62692 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM78B-RAB3IP FAM78B chr1 166135223 - RAB3IP chr12 70206744 + Exonic hg19 SARC TCGA-DX-A1L3-01A 50 11 In-Frame Inter-chr q24.1 q15 Seq+ 62693 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM82B-AKAP6 FAM82B chr8 87487049 - AKAP6 chr14 33299054 + Exonic hg19 BRCA TCGA-E9-A22A-01A 57 27 CDS-3'UTR Inter-chr q12 Seq+ 62694 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM82B-ESRP1 FAM82B chr8 87519224 - ESRP1 chr8 95674729 + Exonic hg19 BRCA TCGA-AR-A0TY-01A 170 138 In-Frame Intra-chr q22.1 Tumor suppressor gene Seq+ 62695 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM83B-COL21A1 FAM83B chr6 54735488 - COL21A1 chr6 55966323 - Exonic hg19 LUSC TCGA-85-A4CN-01A 3 1 In-Frame Intra-chr p12.1 p12.1 Seq+ 62696 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM83D-SF3B3 FAM83D chr20 37570769 - SF3B3 chr16 70597779 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 19 4 Out-of-frame Inter-chr q11.23 q22.1 Seq+ 62697 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM83D-SPECC1L FAM83D chr20 37555568 - SPECC1L chr22 24709281 + Exonic hg19 BRCA TCGA-BH-A0H7-01A 3 4 In-Frame Inter-chr q11.23 q11.23 Seq+ 62698 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM83F-BAIAP2L2 FAM83F chr22 40391535 - BAIAP2L2 chr22 38494489 - Exonic hg19 THYM TCGA-5K-AAAP-01A 34 22 In-Frame Intra-chr q13.1 q13.1 Seq+ 62699 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM83G-B9D1 FAM83G chr17 18891560 - B9D1 chr17 19261264 - Exonic hg19 ESCA TCGA-L5-A8NE-01A 4 33 In-Frame Intra-chr p11.2 p11.2 Seq+ 62700 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM83G-GRAP FAM83G chr17 18906833 - GRAP chr17 18925457 - Exonic hg19 HNSC TCGA-CV-5440-01A 30 11 In-Frame Intra-chr p11.2 p11.2 Seq+ 62701 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM83G-TTC19 FAM83G chr17 18891560 - TTC19 chr17 15928331 + Exonic hg19 BRCA TCGA-D8-A1JA-01A 2 5 Out-of-frame Intra-chr p11.2 p12 Seq+ 62702 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM8A1-CAP2 FAM8A1 chr6 17601352 - CAP2 chr6 17541204 + Exonic hg19 PAAD TCGA-IB-7654-01A 14 3 In-Frame Intra-chr p22.3 p22.3 Seq+ 62703 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM91A1-ANXA13 FAM91A1 chr8 124787538 - ANXA13 chr8 124724993 - Exonic hg19 BLCA TCGA-4Z-AA84-01A 4 7 In-Frame Intra-chr q24.13 q24.13 Seq+ 62704 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM96A-CSNK1G1 FAM96A chr15 64380886 - CSNK1G1 chr15 64592922 - Exonic hg19 STAD TCGA-HU-A4HD-01A 2 10 CDS-5'UTR Intra-chr q22.31 q22.31 Seq+ 62705 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM96A-SNX1 FAM96A chr15 64380886 - SNX1 chr15 64404772 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 29 31 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 62706 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM98A-BRE FAM98A chr2 33820556 - BRE chr2 28460069 + Exonic hg19 SARC TCGA-DX-A6YR-01A 9 7 Out-of-frame Intra-chr p22.3 Seq+ 62707 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM98B-EFTUD1 FAM98B chr15 38746433 - EFTUD1 chr15 82456325 - Exonic hg19 LUAD TCGA-86-7701-01A 4 2 Out-of-frame Intra-chr q14 62708 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM98B-RASGRP1 FAM98B chr15 38773660 - RASGRP1 chr15 38798121 - Exonic hg19 BRCA TCGA-OL-A5RW-01A 8 1 In-Frame Intra-chr q14 q14 Seq+ 62709 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM98C-BLVRB FAM98C chr19 38894334 - BLVRB chr19 40964452 - Exonic hg19 LUSC TCGA-LA-A7SW-01A 58 81 In-Frame Intra-chr q13.2 q13.2 Seq+ 62710 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAM98C-PPP5C FAM98C chr19 38894334 - PPP5C chr19 46878861 + Exonic hg19 SARC TCGA-X2-A95T-01A 3 3 Out-of-frame Intra-chr q13.2 q13.32 Seq+ 62711 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FANCA-CACNA2D4 FANCA chr16 89818546 - CACNA2D4 chr12 1955855 - Exonic hg19 LUAD TCGA-78-7161-01A 3 3 Out-of-frame Inter-chr q24.3 Oncogene p13.33 Seq+ 62712 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FANCA-SPIRE2 FANCA chr16 89836245 - SPIRE2 chr16 89911730 + Exonic hg19 LIHC TCGA-CC-A8HT-01A 6 4 Out-of-frame Intra-chr q24.3 Oncogene q24.3 Seq+ 62713 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FANCC-C9orf3 FANCC chr9 98002931 - C9orf3 chr9 97822976 + Exonic hg19 HNSC TCGA-BA-6873-01A 2 1 In-Frame Intra-chr q22.32 Oncogene q22.32 62714 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FANCC-DDX31 FANCC chr9 98079808 - DDX31 chr9 135538082 - Exonic hg19 LGG TCGA-HT-7483-01A 3 2 5'UTR-CDS Intra-chr q22.32 Oncogene q34.13 62715 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FANCC-PSIP1 FANCC chr9 97912205 - PSIP1 chr9 15490122 - Exonic hg19 KIRP TCGA-SX-A71V-01A 10 9 In-Frame Intra-chr q22.32 Oncogene p22.3 Oncogene Seq+ 62716 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FANCC-ROR2 FANCC chr9 98002931 - ROR2 chr9 94538100 - Exonic hg19 PRAD TCGA-XQ-A8TA-01A 10 2 Out-of-frame Intra-chr q22.32 Oncogene q22.31 TK:Ror Tumor suppressor gene Seq+ 62717 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FANCD2-MTMR14 FANCD2 chr3 10094181 - MTMR14 chr3 9703951 + Exonic hg19 STAD TCGA-BR-8060-01A 2 4 Out-of-frame Intra-chr p25.3 Oncogene p25.3 Seq+ 62718 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FANCD2-MTMR14 FANCD2 chr3 10074656 - MTMR14 chr3 9719001 + Exonic hg19 BRCA TCGA-D8-A1JM-01A 31 18 In-Frame Intra-chr p25.3 Oncogene p25.3 Seq+ 62719 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FANCI-ABHD2 FANCI chr15 89822005 - ABHD2 chr15 89719043 + Exonic hg19 BLCA TCGA-DK-AA6S-01A 6 3 In-Frame Intra-chr q26.1 q26.1 Seq+ 62720 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FANCI-HADHB FANCI chr15 89817535 - HADHB chr2 26492821 + Exonic hg19 UCS TCGA-N5-A59F-01A 9 13 In-Frame Inter-chr q26.1 p23.3 Seq+ 62721 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FANCM-PRPF39 FANCM chr14 45665750 - PRPF39 chr14 45576654 + Exonic hg19 CESC TCGA-VS-A9UO-01A 5 3 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 62722 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAR1-AP000769.1 FAR1 chr11 13690353 - AP000769.1 chr11 65233556 + Exonic hg19 PRAD TCGA-HC-7745-01A 8 6 Out-of-frame Intra-chr p15.3 q13.1 62723 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAR1-C3orf55 FAR1 chr11 13722039 - C3orf55 chr3 157271019 + Exonic hg19 SARC TCGA-DX-A3LT-01A 144 73 CDS-5'UTR Inter-chr p15.3 Seq+ 62724 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAR2-AGMO FAR2 chr12 29474857 - AGMO chr7 15240984 - Exonic hg19 BLCA TCGA-KQ-A41Q-01A 14 13 In-Frame Inter-chr p11.22 p21.2 Seq+ 62725 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAR2-NFE2 FAR2 chr12 29474857 - NFE2 chr12 54689088 - Exonic hg19 STAD TCGA-BR-A4PF-01A 2 44 CDS-5'UTR Intra-chr p11.22 q13.13 Transcription factor Seq+ 62726 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FARP1-GPC6 FARP1 chr13 99038068 - GPC6 chr13 94482407 + Exonic hg19 LUSC TCGA-60-2709-01A 2 4 Out-of-frame Intra-chr q32.2 q31.3 Seq+ 62727 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FARP1-NALCN FARP1 chr13 98865667 - NALCN chr13 101944717 - Exonic hg19 LUAD TCGA-69-7979-01A 4 5 Out-of-frame Intra-chr q32.2 q33.1 Seq+ 62728 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FARP1-NME1-NME2 FARP1 chr13 98865667 - NME1-NME2 chr17 49237341 + Exonic hg19 LGG TCGA-DB-5275-01A 116 29 Out-of-frame Inter-chr q32.2 q21.33 Tumor suppressor gene 62729 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FARP1-SIAE FARP1 chr13 99102023 - SIAE chr11 124543777 - Exonic hg19 BRCA TCGA-E2-A154-01A 2 3 3'UTR-5'UTR Inter-chr q32.2 q24.2 62730 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FARP1-UCHL3 FARP1 chr13 98795746 - UCHL3 chr13 76134889 + Exonic hg19 LUAD TCGA-69-7979-01A 13 19 5'UTR-CDS Intra-chr q32.2 q22.2 Seq+ 62731 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FARP2-INHA FARP2 chr2 242312705 - INHA chr2 220439416 + Exonic hg19 UCEC TCGA-EO-A3AV-01A 15 6 Out-of-frame Intra-chr q37.3 q35 Seq+ 62732 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FARP2-SEPT2 FARP2 chr2 242357524 - SEPT2 chr2 242291382 + Exonic hg19 LUAD TCGA-86-8673-01A 19 7 CDS-3'UTR Intra-chr q37.3 q37.3 Seq+ 62733 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FARS2-AKR1E2 FARS2 chr6 5261893 - AKR1E2 chr10 4872867 + Exonic hg19 LUAD TCGA-55-8620-01A 6 1 5'UTR-CDS Inter-chr p25.1 p15.1 Seq+ 62734 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FARS2-BATF2 FARS2 chr6 5613553 - BATF2 chr11 64757284 - Exonic hg19 GBM TCGA-41-5651-01A 2 1 Out-of-frame Inter-chr p25.1 q13.1 Tumor suppressor gene Transcription factor 62735 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FARS2-CDYL FARS2 chr6 5261893 - CDYL chr6 4891947 + Exonic hg19 SKCM TCGA-WE-A8K1-06A 6 5 5'UTR-5'UTR Intra-chr p25.1 p25.1 Seq+ 62736 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FARS2-DTNBP1 FARS2 chr6 5613553 - DTNBP1 chr6 15593312 - Exonic hg19 UCEC TCGA-AJ-A3TW-01A 9 5 In-Frame Intra-chr p25.1 p22.3 Seq+ 62737 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FARS2-GCNT2 FARS2 chr6 5613553 - GCNT2 chr6 10621584 + Exonic hg19 LGG TCGA-FG-7636-01A 4 3 Out-of-frame Intra-chr p25.1 p24.3 Seq+ 62738 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FARS2-KPNA4 FARS2 chr6 5261893 - KPNA4 chr3 160254628 - Exonic hg19 SARC TCGA-K1-A42X-02A 3 1 5'UTR-CDS Inter-chr p25.1 q25.33 62739 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FARS2-LYRM4 FARS2 chr6 5613553 - LYRM4 chr6 5216971 - Exonic hg19 SKCM TCGA-D3-A2J9-06A 14 9 In-Frame Intra-chr p25.1 p25.1 Seq+ 62740 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FARS2-PHACTR1 FARS2 chr6 5613553 - PHACTR1 chr6 12718931 + Exonic hg19 HNSC TCGA-CV-6935-01A 2 1 CDS-5'UTR Intra-chr p25.1 62741 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FARS2-RIPK1 FARS2 chr6 5545573 - RIPK1 chr6 3076998 + Exonic hg19 PRAD TCGA-YJ-A8SW-01A 8 5 Out-of-frame Intra-chr p25.1 p25.2 TKL:RIPK Seq+ 62742 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FARS2-RREB1 FARS2 chr6 5545573 - RREB1 chr6 7211037 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 3 3 Out-of-frame Intra-chr p25.1 p24.3 Transcription factor 62743 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FARSA-AP1G2 FARSA chr19 13033294 - AP1G2 chr14 24037279 - Exonic hg19 HNSC TCGA-CV-5978-01A 2 1 3'UTR-5'UTR Inter-chr p13.13 q11.2 62744 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FARSA-LYL1 FARSA chr19 13039156 - LYL1 chr19 13210548 - Exonic hg19 STAD TCGA-CG-4443-01A 27 26 In-Frame Intra-chr p13.13 p13.13 Transcription factor 62745 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FARSA-NARS2 FARSA chr19 13034965 - NARS2 chr11 78239982 - Exonic hg19 BLCA TCGA-GU-A764-01A 3 4 Out-of-frame Inter-chr p13.13 q14.1 62746 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAS-CTNND2 FAS chr10 90762951 - CTNND2 chr5 11023091 - Exonic hg19 BRCA TCGA-E9-A247-01A 3 2 In-Frame Inter-chr q23.31 Oncogene Tumor suppressor gene p15.2 Seq+ 62747 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FASN-CCDC57 FASN chr17 80055997 - CCDC57 chr17 80059742 - Exonic hg19 OV TCGA-13-1512-01A 175 293 5'UTR-CDS Intra-chr q25.3 q25.3 Seq+ 62748 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FASN-CCDC57 FASN chr17 80042911 - CCDC57 chr17 80059742 - Exonic hg19 LIHC TCGA-FV-A2QR-01A 33 13 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 62749 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FASN-LOXL4 FASN chr17 80040199 - LOXL4 chr10 100022808 - Exonic hg19 SKCM TCGA-ER-A19H-06A 2 7 CDS-5'UTR Inter-chr q25.3 q24.2 62750 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FASN-ZNF595 FASN chr17 80053196 - ZNF595 chr4 59323 + Exonic hg19 LUAD TCGA-86-8359-01A 4 3 In-Frame Inter-chr q25.3 p16.3 Transcription factor Seq+ 62751 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FASTK-GNGT1 FASTK chr7 150774397 - GNGT1 chr7 93540102 + Exonic hg19 LGG TCGA-S9-A89Z-01A 2 7 Out-of-frame Intra-chr q36.1 Atypical:FAST q21.3 Seq+ 62752 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAT1-ACSL1 FAT1 chr4 187627717 - ACSL1 chr4 185724700 - Exonic hg19 HNSC TCGA-CN-4722-01A 444 315 CDS-5'UTR Intra-chr q35.2 Tumor suppressor gene q35.1 Seq+ 62753 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAT1-IRF2 FAT1 chr4 187530337 - IRF2 chr4 185350224 - Exonic hg19 LUSC TCGA-63-A5MJ-01A 92 72 CDS-5'UTR Intra-chr q35.2 Tumor suppressor gene q35.1 Transcription factor Seq+ 62754 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAT1-KIAA1430 FAT1 chr4 187554838 - KIAA1430 chr4 186085333 - Exonic hg19 HNSC TCGA-DQ-7588-01A 498 348 In-Frame Intra-chr q35.2 Tumor suppressor gene Seq+ 62755 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAT1-NPY1R FAT1 chr4 187647508 - NPY1R chr4 164247857 - Exonic hg19 COAD TCGA-D5-5538-01A 3 1 5'UTR-5'UTR Intra-chr q35.2 Tumor suppressor gene q32.2 Seq+ 62756 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAT1-NTRK3 FAT1 chr4 187627717 - NTRK3 chr15 88680792 - Exonic hg19 CESC TCGA-HM-A3JK-01A 5 7 Out-of-frame Inter-chr q35.2 Tumor suppressor gene q25.3 Oncogene Tumor suppressor gene Seq+ 62757 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAT1-STAT6 FAT1 chr4 187508949 - STAT6 chr12 57496773 - Exonic hg19 STAD TCGA-BR-8680-01A 2 5 Out-of-frame Inter-chr q35.2 Tumor suppressor gene q13.3 Transcription factor 62758 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAT2-ATOX1 FAT2 chr5 150921846 - ATOX1 chr5 151131340 - Exonic hg19 LUSC TCGA-85-8071-01A 7 2 Out-of-frame Intra-chr q33.1 q33.1 Seq+ 62759 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAT3-CDH26 FAT3 chr11 92620279 - CDH26 chr20 58577868 + Exonic hg19 LUAD TCGA-97-A4M3-01A 21 11 Out-of-frame Inter-chr q13.33 Seq+ 62760 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FAT3-DPP3 FAT3 chr11 92088570 - DPP3 chr11 66276550 + Exonic hg19 LUAD TCGA-97-A4M3-01A 37 12 In-Frame Intra-chr q13.2 Seq+ 62761 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBF1-ACOX1 FBF1 chr17 73926078 - ACOX1 chr17 73953647 - Exonic hg19 KIRP TCGA-BQ-5893-01A 2 3 Out-of-frame Intra-chr q25.1 q25.1 62762 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBF1-HELZ FBF1 chr17 73933647 - HELZ chr17 65134230 - Exonic hg19 LUAD TCGA-78-7146-01A 13 7 Out-of-frame Intra-chr q25.1 q24.2 Seq+ 62763 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBL-CTC-435M10.3 FBL chr19 40336931 - CTC-435M10.3 chr19 41884186 + Exonic hg19 SKCM TCGA-EE-A20I-06A 6 1 Out-of-frame Intra-chr 62764 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBL-RASGRP4 FBL chr19 40336931 - RASGRP4 chr19 38900736 - Exonic hg19 SKCM TCGA-ER-A19T-01A 3 7 Out-of-frame Intra-chr q13.2 Seq+ 62765 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBL-RYR1 FBL chr19 40336931 - RYR1 chr19 39055599 + Exonic hg19 SKCM TCGA-ER-A19T-01A 49 41 Out-of-frame Intra-chr q13.2 Seq+ 62766 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBL-SEC63 FBL chr19 40325094 - SEC63 chr6 108214782 - Exonic hg19 TGCT TCGA-XE-AANJ-01A 2 1 Out-of-frame Inter-chr q21 62767 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBL-ZNF829 FBL chr19 40327196 - ZNF829 chr19 37406153 - Exonic hg19 ESCA TCGA-L5-A8NG-01A 2 12 In-Frame Intra-chr q13.12 Transcription factor Seq+ 62768 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBLIM1-CELA2B FBLIM1 chr1 16084824 - CELA2B chr1 15802952 + Exonic hg19 UCEC TCGA-A5-A7WK-01A 7 6 5'UTR-CDS Intra-chr p36.21 p36.21 Seq+ 62769 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBLIM1-DNAH14 FBLIM1 chr1 16101291 - DNAH14 chr1 225418775 + Exonic hg19 CESC TCGA-VS-A9V0-01A 2 1 Out-of-frame Intra-chr p36.21 q42.12 Seq+ 62770 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBLN1-SMC1B FBLN1 chr22 45898944 - SMC1B chr22 45804779 - Exonic hg19 BLCA TCGA-DK-A6B2-01A 6 8 In-Frame Intra-chr q13.31 Tumor suppressor gene q13.31 Seq+ 62771 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBN1-C19orf2 FBN1 chr15 48936803 - C19orf2 chr19 30476130 + Exonic hg19 SARC TCGA-LI-A9QH-01A 56 62 Out-of-frame Inter-chr q21.1 62772 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBN1-EIF3B FBN1 chr15 48757765 - EIF3B chr7 2415024 + Exonic hg19 SARC TCGA-SG-A849-01A 29 15 Out-of-frame Inter-chr q21.1 p22.3 Seq+ 62773 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBN1-TEX9 FBN1 chr15 48905207 - TEX9 chr15 56686363 + Exonic hg19 MESO TCGA-TS-A8AF-01A 6 3 In-Frame Intra-chr q21.1 q21.3 Seq+ 62774 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBN1-THSD4 FBN1 chr15 48902925 - THSD4 chr15 71952869 + Exonic hg19 LGG TCGA-DB-5277-01A 5 1 Out-of-frame Intra-chr q21.1 q23 Seq+ 62775 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBRSL1-CKAP4 FBRSL1 chr12 133067447 - CKAP4 chr12 106670327 - Exonic hg19 LUSC TCGA-34-5232-01A 11 16 Out-of-frame Intra-chr q24.33 q23.3 Seq+ 62776 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBRSL1-GALNT9 FBRSL1 chr12 133067447 - GALNT9 chr12 132863016 - Exonic hg19 OV TCGA-61-2102-01A 5 2 Out-of-frame Intra-chr q24.33 q24.33 Seq+ 62777 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL17-SPINK14 FBXL17 chr5 107684100 - SPINK14 chr5 147553797 + Exonic hg19 LIHC TCGA-ZP-A9D4-01A 2 2 In-Frame Intra-chr q21.3 q32 Seq+ 62778 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL17-TMEM232 FBXL17 chr5 107521818 - TMEM232 chr5 109941988 - Exonic hg19 SKCM TCGA-EB-A82C-01A 66 38 In-Frame Intra-chr q21.3 q22.1 Seq+ 62779 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL18-PHF12 FBXL18 chr7 5540119 - PHF12 chr17 27238255 - Exonic hg19 ESCA TCGA-LN-A8HZ-01A 3 3 Out-of-frame Inter-chr p22.1 q11.2 62780 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL19-RNF40 FBXL19 chr16 30941905 - RNF40 chr16 30785259 + Exonic hg19 CESC TCGA-DS-A1OC-01A 18 13 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 62781 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL2-KIF9 FBXL2 chr3 33339454 - KIF9 chr3 47299050 - Exonic hg19 BLCA TCGA-UY-A9PE-01A 6 4 Out-of-frame Intra-chr p22.3 p21.31 Seq+ 62782 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL20-ABCA6 FBXL20 chr17 37557614 - ABCA6 chr17 67124945 - Exonic hg19 BRCA TCGA-A2-A0T1-01A 2 1 In-Frame Intra-chr q12 q24.3 62783 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL20-BTBD1 FBXL20 chr17 37499433 - BTBD1 chr15 83725297 - Exonic hg19 SARC TCGA-FX-A3TO-01A 7 10 In-Frame Inter-chr q12 q25.2 Seq+ 62784 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL20-C17orf37 FBXL20 chr17 37557614 - C17orf37 chr17 37886544 - Exonic hg19 BRCA TCGA-A7-A13D-01A 5 8 Out-of-frame Intra-chr q12 62785 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL20-C6orf115 FBXL20 chr17 37499433 - C6orf115 chr6 139355292 + Exonic hg19 PCPG TCGA-WB-A81F-01A 18 11 Out-of-frame Inter-chr q12 62786 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL20-CEP95 FBXL20 chr17 37557614 - CEP95 chr17 62521888 + Exonic hg19 BRCA TCGA-3C-AALI-01A 5 4 In-Frame Intra-chr q12 q23.3 62787 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL20-GDPD5 FBXL20 chr17 37457254 - GDPD5 chr11 75167861 - Exonic hg19 BRCA TCGA-A1-A0SM-01A 16 7 In-Frame Inter-chr q12 q13.5 Seq+ 62788 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL20-GRB7 FBXL20 chr17 37557614 - GRB7 chr17 37898505 + Exonic hg19 LUSC TCGA-60-2715-01A 2 1 Out-of-frame Intra-chr q12 q12 Seq+ 62789 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL20-GRB7 FBXL20 chr17 37557614 - GRB7 chr17 37898505 + Exonic hg19 READ TCGA-AF-A56L-01A 151 158 Out-of-frame Intra-chr q12 q12 Seq+ 62790 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL20-GSDMB FBXL20 chr17 37557614 - GSDMB chr17 38068750 - Exonic hg19 LUSC TCGA-22-0944-01A 7 9 Out-of-frame Intra-chr q12 q21.1 Seq+ 62791 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL20-GSDMB FBXL20 chr17 37499433 - GSDMB chr17 38073574 - Exonic hg19 UCEC TCGA-B5-A5OE-01A 23 26 CDS-5'UTR Intra-chr q12 q21.1 Seq+ 62792 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL20-GSDMB FBXL20 chr17 37557614 - GSDMB chr17 38068750 - Exonic hg19 STAD TCGA-BR-8060-01A 19 78 Out-of-frame Intra-chr q12 q21.1 Seq+ 62793 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL20-KRT27 FBXL20 chr17 37437642 - KRT27 chr17 38936113 - Exonic hg19 BLCA TCGA-FD-A62S-01A 3 2 In-Frame Intra-chr q12 q21.2 62794 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL20-LRSAM1 FBXL20 chr17 37557614 - LRSAM1 chr9 130257599 + Exonic hg19 BRCA TCGA-AC-A2FF-01A 4 6 In-Frame Inter-chr q12 q33.3 Seq+ 62795 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL20-MSL1 FBXL20 chr17 37453380 - MSL1 chr17 38290532 + Exonic hg19 BRCA TCGA-A2-A1G1-01A 113 75 In-Frame Intra-chr q12 q21.1 Seq+ 62796 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL20-MSL1 FBXL20 chr17 37453380 - MSL1 chr17 38290532 + Exonic hg19 BRCA TCGA-E2-A15M-01A 13 6 In-Frame Intra-chr q12 q21.1 Seq+ 62797 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL20-MYO1D FBXL20 chr17 37457254 - MYO1D chr17 31107802 - Exonic hg19 BRCA TCGA-A8-A08S-01A 10 20 Out-of-frame Intra-chr q12 q11.2 Seq+ 62798 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL20-NOTCH2 FBXL20 chr17 37557614 - NOTCH2 chr1 120465401 - Exonic hg19 BRCA TCGA-AR-A254-01A 6 8 Out-of-frame Inter-chr q12 p12 Oncogene Tumor suppressor gene Seq+ 62799 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL20-ORMDL3 FBXL20 chr17 37557614 - ORMDL3 chr17 38080478 - Exonic hg19 LUSC TCGA-22-0944-01A 135 78 CDS-5'UTR Intra-chr q12 q21.1 Seq+ 62800 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL20-PITPNC1 FBXL20 chr17 37557614 - PITPNC1 chr17 65688688 + Exonic hg19 BRCA TCGA-3C-AALI-01A 18 21 In-Frame Intra-chr q12 q24.2 Seq+ 62801 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL20-PPM1E FBXL20 chr17 37499433 - PPM1E chr17 57033010 + Exonic hg19 BRCA TCGA-OL-A5RZ-01A 15 10 In-Frame Intra-chr q12 q22 Seq+ 62802 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL20-SIRT6 FBXL20 chr17 37557614 - SIRT6 chr19 4175934 - Exonic hg19 BRCA TCGA-A2-A0EY-01A 2 4 Out-of-frame Inter-chr q12 p13.3 Tumor suppressor gene Seq+ 62803 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL20-SOCS7 FBXL20 chr17 37557614 - SOCS7 chr17 36551562 + Exonic hg19 BRCA TCGA-AR-A254-01A 39 64 Out-of-frame Intra-chr q12 q12 Seq+ 62804 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL20-TANC2 FBXL20 chr17 37499433 - TANC2 chr17 61086898 + Exonic hg19 BRCA TCGA-A8-A076-01A 2 1 CDS-5'UTR Intra-chr q12 q23.2 Seq+ 62805 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL20-TTC17 FBXL20 chr17 37499433 - TTC17 chr11 43511789 + Exonic hg19 LUAD TCGA-86-A4P7-01A 15 11 Out-of-frame Inter-chr q12 p12 Seq+ 62806 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL20-UVRAG FBXL20 chr17 37557614 - UVRAG chr11 75826968 + Exonic hg19 UCS TCGA-NA-A5I1-01A 2 3 In-Frame Inter-chr q12 q13.5 Tumor suppressor gene 62807 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL3-KLF5 FBXL3 chr13 77600962 - KLF5 chr13 73635999 + Exonic hg19 BRCA TCGA-E2-A2P6-01A 4 3 5'UTR-CDS Intra-chr q22.3 q22.1 Tumor suppressor gene Transcription factor 62808 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL3-MYCBP2 FBXL3 chr13 77589544 - MYCBP2 chr13 77625297 - Exonic hg19 PRAD TCGA-V1-A8WV-01A 14 7 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 62809 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL3-ZNF76 FBXL3 chr13 77589544 - ZNF76 chr6 35259055 + Exonic hg19 UCS TCGA-NA-A4QV-01A 35 21 In-Frame Inter-chr q22.3 p21.31 Transcription factor Seq+ 62810 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL5-RAB28 FBXL5 chr4 15656827 - RAB28 chr4 13481150 - Exonic hg19 PRAD TCGA-M7-A724-01A 12 6 In-Frame Intra-chr p15.32 p15.33 Seq+ 62811 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL7-AGXT2 FBXL7 chr5 15616181 - AGXT2 chr5 35003966 - Exonic hg19 SKCM TCGA-D9-A6EC-06A 5 1 Out-of-frame Intra-chr p15.1 p13.2 62812 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL7-CCT5 FBXL7 chr5 15616181 - CCT5 chr5 10254257 + Exonic hg19 SARC TCGA-DX-A1L3-01A 21 22 Out-of-frame Intra-chr p15.1 p15.2 Seq+ 62813 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL7-CCT5 FBXL7 chr5 15939900 - CCT5 chr5 10250033 + Exonic hg19 UCS TCGA-N8-A4PQ-01A 2 10 Out-of-frame Intra-chr p15.1 p15.2 Seq+ 62814 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL7-CDH10 FBXL7 chr5 15616181 - CDH10 chr5 24593722 - Exonic hg19 SARC TCGA-DX-A7EI-01A 25 15 CDS-5'UTR Intra-chr p15.1 p14.1 Seq+ 62815 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL7-FOSL2 FBXL7 chr5 15500822 - FOSL2 chr2 28626974 + Exonic hg19 SKCM TCGA-D3-A3CF-06A 23 11 Out-of-frame Inter-chr p15.1 p23.2 Transcription factor Seq+ 62816 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL7-MRPL51 FBXL7 chr5 15500822 - MRPL51 chr12 6602138 - Exonic hg19 SARC TCGA-DX-A1KZ-01A 62 44 In-Frame Inter-chr p15.1 p13.31 Seq+ 62817 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL7-NRD1 FBXL7 chr5 15616181 - NRD1 chr1 52299842 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 220 92 In-Frame Inter-chr p15.1 Seq+ 62818 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXL7-PTPN3 FBXL7 chr5 15616181 - PTPN3 chr9 112190964 - Exonic hg19 SARC TCGA-DX-A1KZ-01A 2 1 Out-of-frame Inter-chr p15.1 q31.3 62819 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO11-INTS9 FBXO11 chr2 48132628 - INTS9 chr8 28671129 - Exonic hg19 PRAD TCGA-VP-A87D-01A 3 4 Out-of-frame Inter-chr p16.3 p21.1 Seq+ 62820 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO16-ADAM32 FBXO16 chr8 28304688 - ADAM32 chr8 39131831 + Exonic hg19 BRCA TCGA-A2-A0EX-01A 8 4 Out-of-frame Intra-chr p21.1 62821 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO17-OSBPL6 FBXO17 chr19 39466226 - OSBPL6 chr2 179259040 + Exonic hg19 BLCA TCGA-ZF-AA58-01A 34 28 5'UTR-CDS Inter-chr q31.2 Seq+ 62822 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO17-SIPA1L3 FBXO17 chr19 39416845 - SIPA1L3 chr19 38519729 + Exonic hg19 OV TCGA-5X-AA5U-01A 2 20 3'UTR-5'UTR Intra-chr q13.13 62823 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO18-FRMD4A FBXO18 chr10 5932309 - FRMD4A chr10 13717044 - Exonic hg19 PRAD TCGA-J4-A83M-01A 2 6 5'UTR-CDS Intra-chr p15.1 p13 Seq+ 62824 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO18-ITGA8 FBXO18 chr10 5960441 - ITGA8 chr10 15648421 - Exonic hg19 KIRC TCGA-B0-4688-01A 85 70 In-Frame Intra-chr p15.1 p13 Seq+ 62825 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO21-CHPT1 FBXO21 chr12 117593596 - CHPT1 chr12 102107868 + Exonic hg19 BLCA TCGA-XF-A9SH-01A 3 3 Out-of-frame Intra-chr q24.22 q23.2 62826 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO22-SNX33 FBXO22 chr15 76209735 - SNX33 chr15 75949303 + Exonic hg19 BRCA TCGA-A7-A0CG-01A 20 5 In-Frame Intra-chr q24.2 q24.2 Seq+ 62827 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO28-LYZL2 FBXO28 chr1 224302098 - LYZL2 chr10 30901829 - Exonic hg19 HNSC TCGA-CV-7406-01A 27 19 Out-of-frame Inter-chr q42.11 p11.23 Seq+ 62828 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO31-ZNRF1 FBXO31 chr16 87393901 - ZNRF1 chr16 75127470 + Exonic hg19 BLCA TCGA-E5-A4TZ-01A 14 15 In-Frame Intra-chr q24.2 Tumor suppressor gene q23.1 Seq+ 62829 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO33-SERINC5 FBXO33 chr14 39900768 - SERINC5 chr5 79470870 - Exonic hg19 SKCM TCGA-FW-A3I3-06A 16 10 Out-of-frame Inter-chr q21.1 q14.1 Seq+ 62830 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO34-ATG7 FBXO34 chr14 55738255 - ATG7 chr3 11596285 + Exonic hg19 PRAD TCGA-V1-A8WL-01A 4 13 5'UTR-CDS Inter-chr q22.3 p25.3 Seq+ 62831 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO34-HECTD1 FBXO34 chr14 55738255 - HECTD1 chr14 31638674 - Exonic hg19 LUAD TCGA-78-8660-01A 28 5 5'UTR-CDS Intra-chr q22.3 q12 Seq+ 62832 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO34-LGALS3 FBXO34 chr14 55738255 - LGALS3 chr14 55606993 + Exonic hg19 LUAD TCGA-44-4112-01A 49 42 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 62833 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO34-LGALS3 FBXO34 chr14 55738255 - LGALS3 chr14 55604088 + Exonic hg19 OV TCGA-59-2355-01A 14 29 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 62834 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO34-RALYL FBXO34 chr14 55738255 - RALYL chr8 85686814 + Exonic hg19 KIRC TCGA-CZ-4865-01A 17 8 5'UTR-CDS Inter-chr q22.3 q21.2 Seq+ 62835 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO38-SKIV2L2 FBXO38 chr5 147763602 - SKIV2L2 chr5 54618155 + Exonic hg19 SKCM TCGA-D3-A51N-06A 2 2 5'UTR-CDS Intra-chr q32 q11.2 62836 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO38-SPINK6 FBXO38 chr5 147796767 - SPINK6 chr5 147582584 + Exonic hg19 BRCA TCGA-BH-A0BZ-01A 6 3 CDS-5'UTR Intra-chr q32 q32 Seq+ 62837 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO42-C19orf26 FBXO42 chr1 16582206 - C19orf26 chr19 1231274 - Exonic hg19 LUSC TCGA-33-4587-01A 13 10 Out-of-frame Inter-chr p36.13 Seq+ 62838 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO42-LAPTM5 FBXO42 chr1 16678750 - LAPTM5 chr1 31215396 - Exonic hg19 UCEC TCGA-AJ-A23N-01A 15 7 5'UTR-CDS Intra-chr p36.13 p35.2 Seq+ 62839 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO42-RUNX1 FBXO42 chr1 16678750 - RUNX1 chr21 36171759 - Exonic hg19 BRCA TCGA-AC-A2FO-01A 7 11 5'UTR-CDS Inter-chr p36.13 q22.12 Oncogene Tumor suppressor gene Transcription factor Seq+ 62840 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO42-SPATA21 FBXO42 chr1 16678750 - SPATA21 chr1 16731599 - Exonic hg19 BLCA TCGA-K4-A6MB-01A 4 10 5'UTR-CDS Intra-chr p36.13 p36.13 Seq+ 62841 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO42-SPATA21 FBXO42 chr1 16621278 - SPATA21 chr1 16752226 - Exonic hg19 UCS TCGA-N9-A4PZ-01A 2 1 Out-of-frame Intra-chr p36.13 p36.13 Seq+ 62842 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO46-AC074212.3 FBXO46 chr19 46234107 - AC074212.3 chr19 46238635 + Exonic hg19 DLBC TCGA-FA-A82F-01A 2 20 Out-of-frame Intra-chr q13.32 62843 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO46-ARG2 FBXO46 chr19 46234107 - ARG2 chr14 68108903 + Exonic hg19 UCEC TCGA-A5-A2K4-01A 5 26 5'UTR-5'UTR Inter-chr q13.32 q24.1 Seq+ 62844 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO46-SYMPK FBXO46 chr19 46234107 - SYMPK chr19 46338486 - Exonic hg19 BRCA TCGA-BH-A0H7-01A 6 20 5'UTR-CDS Intra-chr q13.32 q13.32 Seq+ 62845 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO46-SYMPK FBXO46 chr19 46234107 - SYMPK chr19 46321404 - Exonic hg19 LIHC TCGA-G3-AAUZ-01A 5 29 5'UTR-CDS Intra-chr q13.32 q13.32 Seq+ 62846 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXO8-PALLD FBXO8 chr4 175204561 - PALLD chr4 169589341 + Exonic hg19 SARC TCGA-X6-A8C6-01A 3 7 5'UTR-5'UTR Intra-chr q34.1 q32.3 Seq+ 62847 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXW11-KCNIP1 FBXW11 chr5 171433462 - KCNIP1 chr5 170096503 + Exonic hg19 CESC TCGA-VS-A9UT-01A 65 4 Out-of-frame Intra-chr q35.1 q35.1 Seq+ 62848 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXW11-NUP210L FBXW11 chr5 171433462 - NUP210L chr1 154000073 - Exonic hg19 LIHC TCGA-NI-A4U2-01A 20 10 In-Frame Inter-chr q35.1 q21.3 Seq+ 62849 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXW11-RBM11 FBXW11 chr5 171433462 - RBM11 chr21 15593418 + Exonic hg19 SKCM TCGA-D3-A8GN-06A 3 6 Out-of-frame Inter-chr q35.1 q11.2 Seq+ 62850 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXW2-LTBP2 FBXW2 chr9 123538371 - LTBP2 chr14 74991928 - Exonic hg19 BRCA TCGA-C8-A8HR-01A 3 2 Out-of-frame Inter-chr q33.2 q24.3 Seq+ 62851 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXW2-NXNL2 FBXW2 chr9 123550047 - NXNL2 chr9 91190002 + Exonic hg19 SARC TCGA-HB-A3L4-01A 12 8 CDS-3'UTR Intra-chr q33.2 q22.1 Seq+ 62852 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXW4-C10orf76 FBXW4 chr10 103432672 - C10orf76 chr10 103609649 - Exonic hg19 STAD TCGA-BR-8289-01A 3 20 In-Frame Intra-chr q24.32 q24.32 Seq+ 62853 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXW4-MGEA5 FBXW4 chr10 103427643 - MGEA5 chr10 103553755 - Exonic hg19 BRCA TCGA-B6-A0I6-01A 12 8 Out-of-frame Intra-chr q24.32 q24.32 Seq+ 62854 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXW7-ARHGAP10 FBXW7 chr4 153456093 - ARHGAP10 chr4 148993144 + Exonic hg19 BLCA TCGA-DK-A2HX-01A 12 7 5'UTR-CDS Intra-chr q31.3 Oncogene Tumor suppressor gene q31.23 Seq+ 62855 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXW7-INPP4B FBXW7 chr4 153249360 - INPP4B chr4 143383879 - Exonic hg19 LUSC TCGA-60-2714-01A 2 3 CDS-5'UTR Intra-chr q31.3 Oncogene Tumor suppressor gene q31.21 Tumor suppressor gene 62856 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXW7-SH3D19 FBXW7 chr4 153249360 - SH3D19 chr4 152147238 - Exonic hg19 PAAD TCGA-H8-A6C1-01A 15 12 CDS-5'UTR Intra-chr q31.3 Oncogene Tumor suppressor gene q31.3 Seq+ 62857 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXW7-TMEM126B FBXW7 chr4 153456093 - TMEM126B chr11 85345130 + Exonic hg19 LGG TCGA-CS-6666-01A 2 4 5'UTR-CDS Inter-chr q31.3 Oncogene Tumor suppressor gene q14.1 Seq+ 62858 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXW7-TMEM154 FBXW7 chr4 153456093 - TMEM154 chr4 153574079 - Exonic hg19 LUSC TCGA-56-A4BY-01A 6 10 5'UTR-CDS Intra-chr q31.3 Oncogene Tumor suppressor gene q31.3 Seq+ 62859 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXW7-TMEM154 FBXW7 chr4 153456093 - TMEM154 chr4 153549713 - Exonic hg19 BRCA TCGA-D8-A1JG-01B 5 2 5'UTR-CDS Intra-chr q31.3 Oncogene Tumor suppressor gene q31.3 Seq+ 62860 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXW8-CDK17 FBXW8 chr12 117383333 - CDK17 chr12 96728643 - Exonic hg19 PAAD TCGA-IB-8127-01A 2 1 CDS-5'UTR Intra-chr q24.22 q23.1 62861 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FBXW8-CHST11 FBXW8 chr12 117426674 - CHST11 chr12 104995684 + Exonic hg19 BRCA TCGA-B6-A0RH-01A 2 3 Out-of-frame Intra-chr q24.22 q23.3 62862 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCGBP-PLEKHB2 FCGBP chr19 40353964 - PLEKHB2 chr2 131876464 + Exonic hg19 READ TCGA-EI-6882-01A 2 3 Out-of-frame Inter-chr q21.1 62863 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCGR2A-SPTA1 FCGR2A chr1 161476381 - SPTA1 chr1 158632735 - Exonic hg19 BRCA TCGA-BH-A1EV-01A 4 6 Out-of-frame Intra-chr q23.3 q23.1 Seq+ 62864 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCGRT-BCAT2 FCGRT chr19 50017743 - BCAT2 chr19 49303554 - Exonic hg19 GBM TCGA-14-1402-02A 6 9 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 62865 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCHO2-SLC25A17 FCHO2 chr5 72251956 - SLC25A17 chr22 41175129 - Exonic hg19 SKCM TCGA-XV-AAZY-01A 11 16 Out-of-frame Inter-chr q13.2 q13.2 Seq+ 62866 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCHSD1-NCKAP1L FCHSD1 chr5 141029926 - NCKAP1L chr12 54936359 + Exonic hg19 CESC TCGA-VS-A9U7-01A 66 73 In-Frame Inter-chr q31.3 q13.13 Seq+ 62867 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCHSD2-ABL1 FCHSD2 chr11 72794740 - ABL1 chr9 133729451 + Exonic hg19 UCS TCGA-N8-A4PQ-01A 2 2 Out-of-frame Inter-chr q13.4 q34.12 TK:Abl Oncogene Seq+ 62868 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCHSD2-ARHGEF17 FCHSD2 chr11 72578910 - ARHGEF17 chr11 73057928 + Exonic hg19 UCEC TCGA-BG-A3PP-01A 16 11 In-Frame Intra-chr q13.4 q13.4 Seq+ 62869 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCHSD2-ATP6V1H FCHSD2 chr11 72851076 - ATP6V1H chr8 54682303 - Exonic hg19 SKCM TCGA-ER-A19T-01A 31 2 In-Frame Inter-chr q13.4 q11.23 Seq+ 62870 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCHSD2-ATP6V1H FCHSD2 chr11 72851076 - ATP6V1H chr8 54682303 - Exonic hg19 SKCM TCGA-ER-A19T-06A 6 2 In-Frame Inter-chr q13.4 q11.23 Seq+ 62871 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCHSD2-C11orf83 FCHSD2 chr11 72851076 - C11orf83 chr11 62438756 + Exonic hg19 BRCA TCGA-GM-A2DF-01A 9 5 CDS-5'UTR Intra-chr q13.4 Seq+ 62872 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCHSD2-C2CD3 FCHSD2 chr11 72851076 - C2CD3 chr11 73850873 - Exonic hg19 PRAD TCGA-YJ-A8SW-01A 4 2 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 62873 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCHSD2-CDC42EP2 FCHSD2 chr11 72851076 - CDC42EP2 chr11 65088015 + Exonic hg19 UCS TCGA-N5-A4RA-01A 13 3 CDS-5'UTR Intra-chr q13.4 q13.1 Seq+ 62874 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCHSD2-CPT1A FCHSD2 chr11 72794740 - CPT1A chr11 68564401 - Exonic hg19 BRCA TCGA-BH-A18I-01A 87 52 In-Frame Intra-chr q13.4 q13.3 Seq+ 62875 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCHSD2-DTX4 FCHSD2 chr11 72632873 - DTX4 chr11 58949212 + Exonic hg19 BRCA TCGA-A8-A093-01A 2 2 Out-of-frame Intra-chr q13.4 q12.1 62876 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCHSD2-FAM168A FCHSD2 chr11 72551922 - FAM168A chr11 73179537 - Exonic hg19 UCEC TCGA-D1-A3DH-01A 5 1 CDS-5'UTR Intra-chr q13.4 q13.4 Seq+ 62877 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCHSD2-FAM168A FCHSD2 chr11 72578910 - FAM168A chr11 73179537 - Exonic hg19 BRCA TCGA-D8-A140-01A 20 25 CDS-5'UTR Intra-chr q13.4 q13.4 Seq+ 62878 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCHSD2-FAM168A FCHSD2 chr11 72851076 - FAM168A chr11 73131044 - Exonic hg19 UCEC TCGA-EO-A3KW-01A 6 1 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 62879 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCHSD2-FAM168A FCHSD2 chr11 72794740 - FAM168A chr11 73131044 - Exonic hg19 CESC TCGA-VS-A8QF-01A 3 3 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 62880 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCHSD2-GLOD4 FCHSD2 chr11 72712035 - GLOD4 chr17 681984 - Exonic hg19 HNSC TCGA-CV-6962-01A 2 2 In-Frame Inter-chr q13.4 p13.3 62881 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCHSD2-GLYAT FCHSD2 chr11 72712035 - GLYAT chr11 58491984 - Exonic hg19 TGCT TCGA-SB-A76C-01A 17 13 CDS-5'UTR Intra-chr q13.4 q12.1 Seq+ 62882 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCHSD2-GUCY1A2 FCHSD2 chr11 72851076 - GUCY1A2 chr11 106856857 - Exonic hg19 HNSC TCGA-CN-5367-01A 55 8 Out-of-frame Intra-chr q13.4 q22.3 Oncogene Seq+ 62883 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCHSD2-LDLRAD3 FCHSD2 chr11 72851076 - LDLRAD3 chr11 36248635 + Exonic hg19 CESC TCGA-BI-A0VR-01A 2 1 Out-of-frame Intra-chr q13.4 p13 62884 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCHSD2-PLEKHB1 FCHSD2 chr11 72851076 - PLEKHB1 chr11 73371798 + Exonic hg19 BRCA TCGA-A8-A07E-01A 4 1 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 62885 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCHSD2-PPFIA1 FCHSD2 chr11 72851076 - PPFIA1 chr11 70194295 + Exonic hg19 BLCA TCGA-BT-A42C-01A 10 5 In-Frame Intra-chr q13.4 q13.3 Seq+ 62886 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCHSD2-RALYL FCHSD2 chr11 72695133 - RALYL chr8 85833129 + Exonic hg19 BRCA TCGA-C8-A1HO-01A 4 1 In-Frame Inter-chr q13.4 q21.2 Seq+ 62887 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCHSD2-RNF169 FCHSD2 chr11 72613588 - RNF169 chr11 74500671 + Exonic hg19 BRCA TCGA-BH-A201-01A 29 17 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 62888 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCHSD2-SHANK2 FCHSD2 chr11 72851076 - SHANK2 chr11 70338570 - Exonic hg19 BRCA TCGA-B6-A0RL-01A 85 34 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 62889 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCHSD2-SHANK2 FCHSD2 chr11 72632873 - SHANK2 chr11 70319544 - Exonic hg19 BRCA TCGA-EW-A6SC-01A 46 23 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 62890 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FCHSD2-TPCN2 FCHSD2 chr11 72613588 - TPCN2 chr11 68825046 + Exonic hg19 SKCM TCGA-ER-A19W-06A 37 27 In-Frame Intra-chr q13.4 q13.3 Seq+ 62891 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FDFT1-GATA4 FDFT1 chr8 11667359 - GATA4 chr8 11612555 + Exonic hg19 OV TCGA-09-2051-01A 2 9 In-Frame Intra-chr p23.1 p23.1 Tumor suppressor gene Transcription factor Seq+ 62892 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FDFT1-GATA4 FDFT1 chr8 11679387 - GATA4 chr8 11614444 + Exonic hg19 BLCA TCGA-XF-A9ST-01A 48 19 Out-of-frame Intra-chr p23.1 p23.1 Tumor suppressor gene Transcription factor Seq+ 62893 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FDFT1-INTS9 FDFT1 chr8 11660440 - INTS9 chr8 28707790 - Exonic hg19 BRCA TCGA-E2-A15K-01A 11 2 Out-of-frame Intra-chr p23.1 p21.1 Seq+ 62894 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FDFT1-INTS9 FDFT1 chr8 11660440 - INTS9 chr8 28707790 - Exonic hg19 BRCA TCGA-E2-A15K-06A 8 3 Out-of-frame Intra-chr p23.1 p21.1 Seq+ 62895 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FDFT1-NEIL2 FDFT1 chr8 11660440 - NEIL2 chr8 11640712 + Exonic hg19 BRCA TCGA-AO-A0J2-01A 59 43 Out-of-frame Intra-chr p23.1 p23.1 Seq+ 62896 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FDPS-IPO9 FDPS chr1 155282186 - IPO9 chr1 201840289 + Exonic hg19 PRAD TCGA-J4-A67Q-01A 4 2 In-Frame Intra-chr q22 q32.1 Seq+ 62897 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FDX1-KNCN FDX1 chr11 110306682 - KNCN chr1 47015674 - Exonic hg19 CESC TCGA-C5-A7X5-01A 23 15 Out-of-frame Inter-chr q22.3 p33 Seq+ 62898 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FDXACB1-CRYAB FDXACB1 chr11 111749685 - CRYAB chr11 111782646 - Exonic hg19 OV TCGA-61-1740-01A 4 8 CDS-5'UTR Intra-chr q23.1 q23.1 Seq+ 62899 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FECH-C1orf130 FECH chr18 55247305 - C1orf130 chr1 24921915 + Exonic hg19 BLCA TCGA-BT-A2LA-01A 3 5 CDS-5'UTR Inter-chr q21.31 Seq+ 62900 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FEN1-GDPD4 FEN1 chr11 61560500 - GDPD4 chr11 76940277 - Exonic hg19 SKCM TCGA-EB-A82B-01A 9 8 5'UTR-CDS Intra-chr q12.2 q13.5 Seq+ 62901 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FER-COMMD10 FER chr5 108171508 - COMMD10 chr5 115627214 + Exonic hg19 SARC TCGA-DX-A8BG-01A 6 8 Out-of-frame Intra-chr q21.3 TK:Fer q23.1 Seq+ 62902 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FER-FBXL17 FER chr5 108233549 - FBXL17 chr5 107197561 - Exonic hg19 SKCM TCGA-EB-A82C-01A 14 2 In-Frame Intra-chr q21.3 TK:Fer q21.3 Seq+ 62903 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FERMT1-FAM18B2 FERMT1 chr20 6096458 - FAM18B2 chr17 15341517 - Exonic hg19 BRCA TCGA-E2-A109-01A 12 6 CDS-3'UTR Inter-chr p12.3 62904 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FERMT1-MCM8 FERMT1 chr20 6060083 - MCM8 chr20 5937772 + Exonic hg19 BRCA TCGA-A2-A0CM-01A 2 2 In-Frame Intra-chr p12.3 p12.3 62905 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FERMT1-RBBP8 FERMT1 chr20 6075586 - RBBP8 chr18 20606106 + Exonic hg19 BRCA TCGA-BH-A203-01A 12 7 Out-of-frame Inter-chr p12.3 q11.2 Tumor suppressor gene Seq+ 62906 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FEZ2-RAB10 FEZ2 chr2 36805740 - RAB10 chr2 26321531 + Exonic hg19 LUAD TCGA-67-3770-01A 2 3 Out-of-frame Intra-chr p22.2 p23.3 62907 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGA-ZNFX1 FGA chr4 155506412 - ZNFX1 chr20 47863418 - Exonic hg19 LIHC TCGA-DD-AADP-01A 2 4 Out-of-frame Inter-chr q31.3 q13.13 62908 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGB-PLEKHA5 FGB chr4 155492238 - PLEKHA5 chr12 19441012 + Exonic hg19 LUAD TCGA-78-7148-01A 2 9 Out-of-frame Inter-chr q31.3 p12.3 62909 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGB-STAT6 FGB chr4 155492238 - STAT6 chr12 57496773 - Exonic hg19 LIHC TCGA-BC-4073-01B 2 7 Out-of-frame Inter-chr q31.3 q13.3 Transcription factor 62910 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGD4-ABCC9 FGD4 chr12 32717223 - ABCC9 chr12 22040868 - Exonic hg19 BRCA TCGA-E2-A1LL-01A 11 16 5'UTR-CDS Intra-chr p11.21 p12.1 Seq+ 62911 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGD4-BICD1 FGD4 chr12 32729383 - BICD1 chr12 32530474 + Exonic hg19 SKCM TCGA-EE-A20I-06A 7 4 In-Frame Intra-chr p11.21 p11.21 Seq+ 62912 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGD4-C12orf35 FGD4 chr12 32751520 - C12orf35 chr12 32140173 + Exonic hg19 TGCT TCGA-YU-A90Y-01A 19 11 Out-of-frame Intra-chr p11.21 Seq+ 62913 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGD4-CACNA1C FGD4 chr12 32552893 - CACNA1C chr12 2558142 + Exonic hg19 STAD TCGA-RD-A8N6-01A 4 6 5'UTR-CDS Intra-chr p11.21 p13.33 Seq+ 62914 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGD4-CD4 FGD4 chr12 32764217 - CD4 chr12 6925222 + Exonic hg19 LIHC TCGA-ED-A82E-01A 7 11 Out-of-frame Intra-chr p11.21 p13.31 Tumor suppressor gene Seq+ 62915 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGD4-CNTN5 FGD4 chr12 32655272 - CNTN5 chr11 99426876 + Exonic hg19 READ TCGA-AF-6655-01A 2 3 5'UTR-5'UTR Inter-chr p11.21 q22.1 Seq+ 62916 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGD4-LRRK2 FGD4 chr12 32552893 - LRRK2 chr12 40619357 + Exonic hg19 GBM TCGA-06-0129-01A 2 1 5'UTR-CDS Intra-chr p11.21 q12 TKL:LRRK 62917 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGD4-MRPS35 FGD4 chr12 32552893 - MRPS35 chr12 27867713 + Exonic hg19 PRAD TCGA-XK-AAJ3-01A 10 18 5'UTR-CDS Intra-chr p11.21 p11.22 Seq+ 62918 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGD4-SLCO1A2 FGD4 chr12 32552893 - SLCO1A2 chr12 21487643 - Exonic hg19 ACC TCGA-OR-A5JY-01A 12 4 5'UTR-5'UTR Intra-chr p11.21 p12.1 Seq+ 62919 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGD4-VPS13D FGD4 chr12 32735401 - VPS13D chr1 12516054 + Exonic hg19 LIHC TCGA-KR-A7K8-01A 6 1 In-Frame Inter-chr p11.21 p36.22 Seq+ 62920 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGD5-KPNA3 FGD5 chr3 14952436 - KPNA3 chr13 50280508 - Exonic hg19 KIRC TCGA-CJ-4895-01A 2 1 In-Frame Inter-chr p25.1 q14.2 Seq+ 62921 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGD5-SLC6A6 FGD5 chr3 14863103 - SLC6A6 chr3 14526375 + Exonic hg19 SARC TCGA-DX-A3LS-01A 16 6 Out-of-frame Intra-chr p25.1 p25.1 Seq+ 62922 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGD6-NUP37 FGD6 chr12 95546587 - NUP37 chr12 102479634 - Exonic hg19 BRCA TCGA-E9-A5UO-01A 10 4 Out-of-frame Intra-chr q22 q23.2 Seq+ 62923 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGD6-PTPRR FGD6 chr12 95483345 - PTPRR chr12 71033057 - Exonic hg19 SARC TCGA-DX-AB37-01A 3 9 Out-of-frame Intra-chr q22 q15 Seq+ 62924 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGD6-TBC1D30 FGD6 chr12 95528515 - TBC1D30 chr12 65232463 + Exonic hg19 SARC TCGA-DX-A23V-01A 22 8 In-Frame Intra-chr q22 q14.3 Seq+ 62925 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGD6-VEZT FGD6 chr12 95602619 - VEZT chr12 95645716 + Exonic hg19 HNSC TCGA-IQ-A61E-01A 2 2 Out-of-frame Intra-chr q22 q22 Tumor suppressor gene 62926 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGF12-LAMP3 FGF12 chr3 192444970 - LAMP3 chr3 182872179 - Exonic hg19 LGG TCGA-FG-5963-01A 8 2 In-Frame Intra-chr q29 q27.1 Seq+ 62927 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGF12-LAMP3 FGF12 chr3 192444970 - LAMP3 chr3 182872179 - Exonic hg19 LGG TCGA-FG-5963-02A 7 5 In-Frame Intra-chr q29 q27.1 Seq+ 62928 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGF12-LRRC15 FGF12 chr3 192444970 - LRRC15 chr3 194081775 - Exonic hg19 LUSC TCGA-51-6867-01A 9 5 Out-of-frame Intra-chr q29 q29 Seq+ 62929 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGF12-SYN3 FGF12 chr3 192053150 - SYN3 chr22 32992722 - Exonic hg19 BRCA TCGA-AR-A0TP-01A 10 7 In-Frame Inter-chr q29 q12.3 Seq+ 62930 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGF13-AL109749.1 FGF13 chrX 138286221 - AL109749.1 chrX 131188659 + Exonic hg19 LUAD TCGA-55-1592-01A 8 9 Out-of-frame Intra-chr q27.1 62931 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGF13-DACH2 FGF13 chrX 138286221 - DACH2 chrX 86067859 + Exonic hg19 LUAD TCGA-67-3773-01A 8 7 In-Frame Intra-chr q27.1 q21.2 Transcription factor Seq+ 62932 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGF13-NLRP3 FGF13 chrX 137939674 - NLRP3 chr1 247611707 + Exonic hg19 BRCA TCGA-A2-A04U-01A 12 10 Out-of-frame Inter-chr q27.1 q44 Seq+ 62933 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGF2-FREM3 FGF2 chr4 123748507 - FREM3 chr4 144548913 - Exonic hg19 SARC TCGA-DX-A1L1-01A 38 21 In-Frame Intra-chr q28.1 q31.21 Seq+ 62934 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGF20-RP1 FGF20 chr8 16853164 - RP1 chr8 55651503 + Exonic hg19 UCEC TCGA-AJ-A3BH-01A 9 3 CDS-3'UTR Intra-chr p22 q11.23 Seq+ 62935 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGF3-LGR4 FGF3 chr11 69631088 - LGR4 chr11 27434407 - Exonic hg19 LUSC TCGA-66-2767-01A 2 1 Out-of-frame Intra-chr q13.3 p14.1 62936 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR1-ADAM18 FGFR1 chr8 38314874 - ADAM18 chr8 39463826 + Exonic hg19 BRCA TCGA-E2-A574-01A 15 10 Out-of-frame Intra-chr p11.23 TK:FGFR Oncogene Seq+ 62937 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR1-SLC20A2 FGFR1 chr8 38277057 - SLC20A2 chr8 42330172 - Exonic hg19 LUAD TCGA-69-8255-01A 3 1 CDS-5'UTR Intra-chr p11.23 TK:FGFR Oncogene p11.21 62938 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR1OP-ABCC4 FGFR1OP chr6 167417299 - ABCC4 chr13 95847191 - Exonic hg19 SKCM TCGA-EB-A431-01A 9 12 In-Frame Inter-chr q27 q32.1 Seq+ 62939 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR1OP-MCM9 FGFR1OP chr6 167440103 - MCM9 chr6 119150413 - Exonic hg19 BRCA TCGA-A8-A06R-01A 4 12 Out-of-frame Intra-chr q27 q22.31 Tumor suppressor gene 62940 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR1OP2-C12orf11 FGFR1OP2 chr12 27091643 - C12orf11 chr12 27081838 - Exonic hg19 SARC TCGA-DX-A1KZ-01A 18 4 Out-of-frame Intra-chr p11.23 62941 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR1OP2-TEC FGFR1OP2 chr12 27091643 - TEC chr4 48158751 - Exonic hg19 SKCM TCGA-EE-A2MM-06A 10 4 5'UTR-CDS Inter-chr p11.23 p11 TK:Tec Tumor suppressor gene Seq+ 62942 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR2-ATE1 FGFR2 chr10 123298106 - ATE1 chr10 123683844 - Exonic hg19 UCEC TCGA-AX-A3G3-01A 5 1 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q26.13 Seq+ 62943 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR2-BICC1 FGFR2 chr10 123243212 - BICC1 chr10 60461834 + Exonic hg19 LIHC TCGA-ED-A7PX-01A 76 66 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q21.1 Seq+ 62944 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR2-BICC1 FGFR2 chr10 123243212 - BICC1 chr10 60566344 + Exonic hg19 CHOL TCGA-W5-AA2W-01A 502 353 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q21.1 Seq+ 62945 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR2-BICC1 FGFR2 chr10 123243212 - BICC1 chr10 60461834 + Exonic hg19 CHOL TCGA-ZH-A8Y5-01A 179 128 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q21.1 Seq+ 62946 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR2-C10orf118 FGFR2 chr10 123243212 - C10orf118 chr10 115910979 - Exonic hg19 CHOL TCGA-W5-AA2Z-01A 92 91 In-Frame Intra-chr q26.13 TK:FGFR Oncogene Seq+ 62947 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR2-CCDC6 FGFR2 chr10 123243212 - CCDC6 chr10 61612460 - Exonic hg19 BRCA TCGA-D8-A13Z-01A 26 19 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q21.2 Seq+ 62948 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR2-ENPP2 FGFR2 chr10 123274637 - ENPP2 chr8 120650767 - Exonic hg19 BRCA TCGA-LD-A7W5-01A 82 64 In-Frame Inter-chr q26.13 TK:FGFR Oncogene q24.12 Seq+ 62949 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR2-KIAA1598 FGFR2 chr10 123243212 - KIAA1598 chr10 118708508 - Exonic hg19 UCEC TCGA-5B-A90C-01A 766 467 In-Frame Intra-chr q26.13 TK:FGFR Oncogene Seq+ 62950 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR2-KIAA1598 FGFR2 chr10 123243212 - KIAA1598 chr10 118708508 - Exonic hg19 CHOL TCGA-W5-AA2Q-01A 790 408 In-Frame Intra-chr q26.13 TK:FGFR Oncogene Seq+ 62951 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR2-KIAA1967 FGFR2 chr10 123243212 - KIAA1967 chr8 22464120 + Exonic hg19 LUSC TCGA-66-2765-01A 40 9 In-Frame Inter-chr q26.13 TK:FGFR Oncogene Tumor suppressor gene Seq+ 62952 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR2-OFD1 FGFR2 chr10 123243212 - OFD1 chrX 13754597 + Exonic hg19 THCA TCGA-BJ-A0Z0-01A 53 38 In-Frame Inter-chr q26.13 TK:FGFR Oncogene p22.2 Seq+ 62953 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR2-TACC2 FGFR2 chr10 123243212 - TACC2 chr10 123996910 + Exonic hg19 STAD TCGA-BR-8080-01A 8 75 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q26.13 Seq+ 62954 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR2-USP10 FGFR2 chr10 123353223 - USP10 chr16 84792322 + Exonic hg19 OV TCGA-24-1424-01A 34 24 In-Frame Inter-chr q26.13 TK:FGFR Oncogene q24.1 Seq+ 62955 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-AES FGFR3 chr4 1808661 - AES chr19 3061255 - Exonic hg19 PRAD TCGA-EJ-A7NM-01A 353 292 In-Frame Inter-chr p16.3 TK:FGFR Oncogene p13.3 Seq+ 62956 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-ELAVL3 FGFR3 chr4 1808661 - ELAVL3 chr19 11577642 - Exonic hg19 LGG TCGA-CS-6186-01A 308 65 In-Frame Inter-chr p16.3 TK:FGFR Oncogene p13.2 Seq+ 62957 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-FBXO28 FGFR3 chr4 1808661 - FBXO28 chr1 224340844 + Exonic hg19 LGG TCGA-TM-A84B-01A 1286 649 In-Frame Inter-chr p16.3 TK:FGFR Oncogene q42.11 Seq+ 62958 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-06-2567-01A 2 3 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62959 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-14-0789-01A 4 5 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62960 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-14-1823-01A 3 2 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62961 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-14-1829-01A 3 3 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62962 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1737000 + Exonic hg19 LUSC TCGA-22-4607-01A 156 17 Out-of-frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62963 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1741429 + Exonic hg19 GBM TCGA-27-1835-01A 3525 17411 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62964 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1741429 + Exonic hg19 LUSC TCGA-34-2608-01A 19 14 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62965 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1803470 - TACC3 chr4 1746245 + Exonic hg19 LUAD TCGA-38-4630-01A 8 7 Out-of-frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62966 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1741429 + Exonic hg19 LUSC TCGA-39-5024-01A 1181 440 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62967 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1746245 + Exonic hg19 LUSC TCGA-63-7022-01A 2 1 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62968 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1741429 + Exonic hg19 LUSC TCGA-66-2786-01A 4157 3894 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62969 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1739325 + Exonic hg19 GBM TCGA-76-4925-01A 243 389 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62970 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1741429 + Exonic hg19 LUSC TCGA-92-8065-01A 33 17 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62971 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1741429 + Exonic hg19 KIRP TCGA-A4-7287-01A 2190 2299 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62972 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1741429 + Exonic hg19 BLCA TCGA-CF-A3MF-01A 507 129 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62973 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1741429 + Exonic hg19 BLCA TCGA-CF-A3MG-01A 918 1520 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62974 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1741429 + Exonic hg19 BLCA TCGA-CF-A3MH-01A 1831 2998 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62975 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1741429 + Exonic hg19 BLCA TCGA-CF-A47S-01A 4470 3751 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62976 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1741429 + Exonic hg19 BLCA TCGA-CF-A47T-01A 5 4 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62977 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1737458 + Exonic hg19 BLCA TCGA-CF-A8HY-01A 572 431 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62978 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1739325 + Exonic hg19 HNSC TCGA-CR-6473-01A 1222 454 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62979 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1741429 + Exonic hg19 HNSC TCGA-CV-7100-01A 1499 792 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62980 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1801539 - TACC3 chr4 1746245 + Exonic hg19 LIHC TCGA-DD-A1EK-01A 1527 1605 Out-of-frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62981 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1741429 + Exonic hg19 CESC TCGA-DS-A3LQ-01A 32 10 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62982 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1741429 + Exonic hg19 KIRP TCGA-DW-7839-01A 4 2 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62983 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1741429 + Exonic hg19 BLCA TCGA-E7-A5KE-01A 2072 1418 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62984 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1741429 + Exonic hg19 LGG TCGA-FG-7643-01A 3421 2979 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62985 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1741429 + Exonic hg19 ESCA TCGA-LN-A5U5-01A 3 15 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62986 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1737458 + Exonic hg19 ESCA TCGA-LN-A9FO-01A 23 244 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62987 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1737458 + Exonic hg19 CESC TCGA-LP-A7HU-01A 2 2 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62988 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1732899 + Exonic hg19 LGG TCGA-P5-A72U-01A 878 616 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62989 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1741429 + Exonic hg19 CESC TCGA-VS-A9UD-01A 153 127 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62990 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1737458 + Exonic hg19 CESC TCGA-WL-A834-01A 1624 1516 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62991 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1795770 - TACC3 chr4 1746245 + Exonic hg19 BLCA TCGA-XF-AAMX-01A 666 589 Out-of-frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62992 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1741429 + Exonic hg19 BLCA TCGA-XF-AAMZ-01A 474 365 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62993 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808661 - TACC3 chr4 1741429 + Exonic hg19 CESC TCGA-ZJ-AAXT-01A 2203 2375 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 62994 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGFR3-TPRG1 FGFR3 chr4 1795770 - TPRG1 chr3 189028175 + Exonic hg19 HNSC TCGA-CV-7177-01A 2 2 Out-of-frame Inter-chr p16.3 TK:FGFR Oncogene q28 62995 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGG-CLCN3 FGG chr4 155525286 - CLCN3 chr4 170623929 + Exonic hg19 LIHC TCGA-DD-AADQ-01A 2 24 3'UTR-CDS Intra-chr q32.1 q33 62996 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGGY-ATP2B4 FGGY chr1 59922748 - ATP2B4 chr1 203676990 + Exonic hg19 SARC TCGA-DX-A23U-01A 18 8 Out-of-frame Intra-chr p32.1 q32.1 Seq+ 62997 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGGY-CC2D1B FGGY chr1 60091721 - CC2D1B chr1 52828418 - Exonic hg19 SARC TCGA-DX-AB36-01A 42 27 Out-of-frame Intra-chr p32.1 p32.3 Seq+ 62998 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGGY-CDH17 FGGY chr1 59978111 - CDH17 chr8 95174390 - Exonic hg19 BRCA TCGA-D8-A4Z1-01A 2 3 In-Frame Inter-chr p32.1 q22.1 Tumor suppressor gene Seq+ 62999 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FGGY-RPS6KA1 FGGY chr1 59978111 - RPS6KA1 chr1 26863416 + Exonic hg19 BRCA TCGA-OL-A5RZ-01A 3 1 Out-of-frame Intra-chr p32.1 63000 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FHDC1-ARFIP1 FHDC1 chr4 153875471 - ARFIP1 chr4 153809285 + Exonic hg19 LUAD TCGA-44-7670-01A 5 1 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 63001 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FHDC1-ARFIP1 FHDC1 chr4 153875471 - ARFIP1 chr4 153831216 + Exonic hg19 LUAD TCGA-80-5611-01A 55 24 In-Frame Intra-chr q31.3 q31.3 Seq+ 63002 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FHIT-CADPS FHIT chr3 61027719 - CADPS chr3 62484943 - Exonic hg19 LUAD TCGA-80-5611-01A 6 2 5'UTR-CDS Intra-chr p14.2 Tumor suppressor gene p14.2 63003 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FHIT-CAMK4 FHIT chr3 61027719 - CAMK4 chr5 110679722 + Exonic hg19 KIRC TCGA-B2-4102-01A 8 11 5'UTR-CDS Inter-chr p14.2 Tumor suppressor gene q22.1 Seq+ 63004 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FHIT-FAM19A4 FHIT chr3 60807613 - FAM19A4 chr3 68934461 - Exonic hg19 LUAD TCGA-67-6217-01A 2 1 5'UTR-5'UTR Intra-chr p14.2 Tumor suppressor gene p14.1 63005 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FHIT-KHDRBS3 FHIT chr3 61027719 - KHDRBS3 chr8 136554897 + Exonic hg19 DLBC TCGA-FF-A7CQ-01A 13 18 5'UTR-CDS Inter-chr p14.2 Tumor suppressor gene q24.23 Seq+ 63006 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FHIT-PTPRG FHIT chr3 61236975 - PTPRG chr3 61734552 + Exonic hg19 LGG TCGA-CS-4941-01A 3 1 5'UTR-CDS Intra-chr p14.2 Tumor suppressor gene p14.2 63007 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FHIT-STT3B FHIT chr3 60807613 - STT3B chr3 31617888 + Exonic hg19 STAD TCGA-CG-4443-01A 6 4 5'UTR-CDS Intra-chr p14.2 Tumor suppressor gene p23 63008 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FHIT-SYNPR FHIT chr3 61186291 - SYNPR chr3 63466508 + Exonic hg19 KIRC TCGA-BP-4969-01A 11 1 5'UTR-CDS Intra-chr p14.2 Tumor suppressor gene p14.2 63009 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FHOD3-ELP2 FHOD3 chr18 33952707 - ELP2 chr18 33722789 + Exonic hg19 ACC TCGA-OU-A5PI-01A 46 14 In-Frame Intra-chr q12.2 q12.2 Seq+ 63010 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FHOD3-ESRRB FHOD3 chr18 33952707 - ESRRB chr14 76948359 + Exonic hg19 ACC TCGA-OR-A5KY-01A 18 5 In-Frame Inter-chr q12.2 q24.3 Tumor suppressor gene Transcription factor Seq+ 63011 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FHOD3-GALNT1 FHOD3 chr18 33877963 - GALNT1 chr18 33243592 + Exonic hg19 LUSC TCGA-63-A5MR-01A 14 7 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 63012 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FHOD3-MOCOS FHOD3 chr18 33952707 - MOCOS chr18 33836931 + Exonic hg19 HNSC TCGA-CV-6954-01A 7 5 In-Frame Intra-chr q12.2 q12.2 Seq+ 63013 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FHOD3-MOCOS FHOD3 chr18 33877963 - MOCOS chr18 33828885 + Exonic hg19 HNSC TCGA-DQ-5630-01A 3 1 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 63014 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FHOD3-MOCOS FHOD3 chr18 33877963 - MOCOS chr18 33836931 + Exonic hg19 HNSC TCGA-T3-A92M-01A 5 10 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 63015 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FHOD3-MS4A15 FHOD3 chr18 34267141 - MS4A15 chr11 60531179 + Exonic hg19 HNSC TCGA-CV-5440-01A 8 6 CDS-5'UTR Inter-chr q12.2 q12.2 Seq+ 63016 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FHOD3-MTUS2 FHOD3 chr18 34340745 - MTUS2 chr13 30054287 + Exonic hg19 COAD TCGA-DM-A1HA-01A 7 3 In-Frame Inter-chr q12.2 q12.3 Seq+ 63017 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FHOD3-MYOM1 FHOD3 chr18 33952707 - MYOM1 chr18 3102628 - Exonic hg19 LUAD TCGA-86-8075-01A 23 30 In-Frame Intra-chr q12.2 p11.31 Seq+ 63018 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FIG4-HS3ST5 FIG4 chr6 110086364 - HS3ST5 chr6 114549942 - Exonic hg19 LIHC TCGA-2Y-A9HA-01A 2 1 Out-of-frame Intra-chr q21 q22.1 63019 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FIG4-PPP1R14C FIG4 chr6 110037771 - PPP1R14C chr6 150535880 + Exonic hg19 SKCM TCGA-FS-A1Z0-06A 10 4 Out-of-frame Intra-chr q21 q25.1 Seq+ 63020 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FIG4-WASF1 FIG4 chr6 110064975 - WASF1 chr6 110434663 - Exonic hg19 BRCA TCGA-AO-A124-01A 4 6 Out-of-frame Intra-chr q21 q21 Seq+ 63021 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FIG4-WASF1 FIG4 chr6 110098263 - WASF1 chr6 110424760 - Exonic hg19 BRCA TCGA-BH-A203-01A 15 14 In-Frame Intra-chr q21 q21 Seq+ 63022 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FIGN-STK25 FIGN chr2 164591413 - STK25 chr2 242441123 - Exonic hg19 UCEC TCGA-KP-A3VZ-01A 67 34 Out-of-frame Intra-chr q24.3 q37.3 Seq+ 63023 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FILIP1-KCNQ5 FILIP1 chr6 76124413 - KCNQ5 chr6 73814980 + Exonic hg19 UVM TCGA-VD-A8KJ-01A 3 2 In-Frame Intra-chr q14.1 q13 63024 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FILIP1L-IMPG2 FILIP1L chr3 99594916 - IMPG2 chr3 100988417 - Exonic hg19 HNSC TCGA-HD-7753-01A 6 27 5'UTR-CDS Intra-chr q12.1 q12.3 Seq+ 63025 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FIP1L1-SBNO2 FIP1L1 chr4 54292132 - SBNO2 chr19 1113703 - Exonic hg19 BRCA TCGA-OL-A5D7-01A 13 8 Out-of-frame Inter-chr q12 p13.3 Seq+ 63026 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FIP1L1-SLC38A8 FIP1L1 chr4 54306775 - SLC38A8 chr16 84046657 - Exonic hg19 PRAD TCGA-EJ-A65B-01A 91 77 In-Frame Inter-chr q12 q23.3 Seq+ 63027 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FIP1L1-SORCS1 FIP1L1 chr4 54266006 - SORCS1 chr10 108489872 - Exonic hg19 LUAD TCGA-55-8615-01A 2 3 In-Frame Inter-chr q12 q25.1 Seq+ 63028 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FKBP10-KRT40 FKBP10 chr17 39969531 - KRT40 chr17 39138715 - Exonic hg19 STAD TCGA-CG-4466-01A 51 58 In-Frame Intra-chr q21.2 Seq+ 63029 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FKBP11-PRKAG1 FKBP11 chr12 49317565 - PRKAG1 chr12 49399635 - Exonic hg19 STAD TCGA-BR-8289-01A 3 44 In-Frame Intra-chr q13.12 q13.12 Seq+ 63030 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FKBP15-RET FKBP15 chr9 115932802 - RET chr10 43612032 + Exonic hg19 THCA TCGA-ET-A3DQ-01A 14 6 In-Frame Inter-chr q32 q11.21 TK:Ret Oncogene Seq+ 63031 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FKBP1A-C20orf61 FKBP1A chr20 1373478 - C20orf61 chr20 11791087 - Exonic hg19 SARC TCGA-DX-AB2W-01A 101 81 Out-of-frame Intra-chr p13 63032 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FKBP1A-CDS2 FKBP1A chr20 1373478 - CDS2 chr20 5169713 + Exonic hg19 HNSC TCGA-CV-6937-01A 43 28 Out-of-frame Intra-chr p13 p12.3 Seq+ 63033 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FKBP5-ANKS1A FKBP5 chr6 35586873 - ANKS1A chr6 34935016 + Exonic hg19 PAAD TCGA-HV-A5A6-01A 4 4 Out-of-frame Intra-chr p21.31 p21.31 63034 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FKBP5-BYSL FKBP5 chr6 35656581 - BYSL chr6 41897870 + Exonic hg19 BLCA TCGA-KQ-A41S-01A 3 1 5'UTR-CDS Intra-chr p21.31 p21.1 Seq+ 63035 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FKBP5-SRPK1 FKBP5 chr6 35656581 - SRPK1 chr6 35858790 - Exonic hg19 TGCT TCGA-2G-AAGC-01A 2 2 5'UTR-CDS Intra-chr p21.31 p21.31 CMGC:SRPK 63036 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FKBP8-DAND5 FKBP8 chr19 18654296 - DAND5 chr19 13084203 + Exonic hg19 OV TCGA-13-0800-01A 11 32 5'UTR-CDS Intra-chr p13.11 p13.13 Seq+ 63037 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FKBP8-HAUS8 FKBP8 chr19 18652489 - HAUS8 chr19 17184145 - Exonic hg19 ACC TCGA-OR-A5KX-01A 7 4 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 63038 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FKBP8-SLC1A6 FKBP8 chr19 18644080 - SLC1A6 chr19 15061202 - Exonic hg19 GBM TCGA-14-1034-01A 57 132 Out-of-frame Intra-chr p13.11 p13.12 Seq+ 63039 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FKBP8-SLC1A6 FKBP8 chr19 18644080 - SLC1A6 chr19 15061202 - Exonic hg19 GBM TCGA-14-1034-02B 46 98 Out-of-frame Intra-chr p13.11 p13.12 Seq+ 63040 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FKTN-ULK4 FKTN chr9 108358938 - ULK4 chr3 41795980 - Exonic hg19 STAD TCGA-FP-A8CX-01A 2 5 In-Frame Inter-chr q31.2 p22.1 Other:ULK 63041 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FLCN-COPS3 FLCN chr17 17140226 - COPS3 chr17 17152353 - Exonic hg19 SARC TCGA-DX-A8BO-01A 6 7 5'UTR-CDS Intra-chr p11.2 Oncogene Tumor suppressor gene p11.2 Seq+ 63042 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FLNA-ATP5G3 FLNA chrX 153576900 - ATP5G3 chr2 176049335 - Exonic hg19 KIRP TCGA-G7-6793-01A 2 1 3'UTR-5'UTR Inter-chr q28 Tumor suppressor gene q31.1 63043 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FLNA-EIF2AK2 FLNA chrX 153576900 - EIF2AK2 chr2 37342384 - Exonic hg19 STAD TCGA-BR-A44T-01A 2 1 3'UTR-CDS Inter-chr q28 Tumor suppressor gene p22.2 63044 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FLNA-MTCP1NB FLNA chrX 153602874 - MTCP1NB chrX 154292308 - Exonic hg19 LUSC TCGA-NC-A5HH-01A 12 4 5'UTR-5'UTR Intra-chr q28 Tumor suppressor gene 63045 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FLNA-TKTL1 FLNA chrX 153602874 - TKTL1 chrX 153533656 + Exonic hg19 BRCA TCGA-D8-A1Y0-01A 47 98 5'UTR-CDS Intra-chr q28 Tumor suppressor gene q28 Seq+ 63046 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FLNB-RAD18 FLNB chr3 58155520 - RAD18 chr3 8990254 - Exonic hg19 STAD TCGA-KB-A93J-01A 2 16 In-Frame Intra-chr p14.3 p25.3 Seq+ 63047 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FLNB-RHBDF1 FLNB chr3 57994583 - RHBDF1 chr16 115037 - Exonic hg19 BLCA TCGA-G2-AA3B-01A 9 4 CDS-5'UTR Inter-chr p14.3 p13.3 Seq+ 63048 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FLNB-SLMAP FLNB chr3 57994583 - SLMAP chr3 57908616 + Exonic hg19 BLCA TCGA-4Z-AA7Q-01A 2 1 Out-of-frame Intra-chr p14.3 p14.3 Seq+ 63049 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FLNB-SLMAP FLNB chr3 58088067 - SLMAP chr3 57875768 + Exonic hg19 BRCA TCGA-A2-A0SX-01A 5 5 In-Frame Intra-chr p14.3 p14.3 Seq+ 63050 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FLNB-SLMAP FLNB chr3 57994583 - SLMAP chr3 57898108 + Exonic hg19 BRCA TCGA-A8-A07C-01A 25 27 In-Frame Intra-chr p14.3 p14.3 Seq+ 63051 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FLNB-SLMAP FLNB chr3 57994583 - SLMAP chr3 57902633 + Exonic hg19 CESC TCGA-EA-A556-01A 3 1 Out-of-frame Intra-chr p14.3 p14.3 Seq+ 63052 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FLNB-SLMAP FLNB chr3 58095897 - SLMAP chr3 57843460 + Exonic hg19 PAAD TCGA-LB-A7SX-01A 14 24 In-Frame Intra-chr p14.3 p14.3 Seq+ 63053 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FLNB-SLMAP FLNB chr3 57994583 - SLMAP chr3 57875768 + Exonic hg19 ESCA TCGA-R6-A8W5-01B 2 35 In-Frame Intra-chr p14.3 p14.3 Seq+ 63054 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FLNB-SLMAP FLNB chr3 57994583 - SLMAP chr3 57913023 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 3 6 Out-of-frame Intra-chr p14.3 p14.3 Seq+ 63055 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FLOT2-PEX12 FLOT2 chr17 27215963 - PEX12 chr17 33904610 - Exonic hg19 BRCA TCGA-A2-A25B-01A 11 36 Out-of-frame Intra-chr q11.2 q12 Seq+ 63056 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FLOT2-RAD51B FLOT2 chr17 27224544 - RAD51B chr14 69061202 + Exonic hg19 LIHC TCGA-ZS-A9CG-01A 8 3 In-Frame Inter-chr q11.2 q24.1 Seq+ 63057 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FLT3LG-ALDH16A1 FLT3LG chr19 49979823 - ALDH16A1 chr19 49961743 + Exonic hg19 HNSC TCGA-CN-4736-01A 9 10 In-Frame Intra-chr q13.33 q13.33 Seq+ 63058 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FLYWCH1-FAR1 FLYWCH1 chr16 2990093 - FAR1 chr11 13749103 + Exonic hg19 LUAD TCGA-38-4630-01A 10 11 Out-of-frame Inter-chr p13.3 Transcription factor p15.3 63059 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FLYWCH2-SLC37A3 FLYWCH2 chr16 2933367 - SLC37A3 chr7 140037149 - Exonic hg19 PRAD TCGA-EJ-A7NN-01A 2 4 5'UTR-CDS Inter-chr p13.3 q34 63060 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FMN1-AVEN FMN1 chr15 33091005 - AVEN chr15 34168196 - Exonic hg19 SKCM TCGA-D3-A5GL-06A 44 30 Out-of-frame Intra-chr q14 Seq+ 63061 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FMN1-FAM100B FMN1 chr15 33218375 - FAM100B chr17 74266275 + Exonic hg19 SKCM TCGA-WE-A8ZT-06A 6 1 Out-of-frame Inter-chr 63062 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FMN1-KIAA1267 FMN1 chr15 33357158 - KIAA1267 chr17 44249598 - Exonic hg19 SKCM TCGA-FS-A1Z4-06A 13 10 Out-of-frame Inter-chr 63063 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FMNL2-KRT32 FMNL2 chr2 153378540 - KRT32 chr17 39616491 - Exonic hg19 STAD TCGA-R5-A7ZE-01B 5 93 Out-of-frame Inter-chr q23.3 q21.2 Seq+ 63064 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FMNL3-AGAP2 FMNL3 chr12 50050187 - AGAP2 chr12 58129210 - Exonic hg19 SARC TCGA-DX-A3LS-01A 11 1 Out-of-frame Intra-chr q13.12 q14.1 63065 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FMNL3-C12orf51 FMNL3 chr12 50100838 - C12orf51 chr12 112721106 - Exonic hg19 SARC TCGA-DX-A1KW-01A 19 9 In-Frame Intra-chr q13.12 63066 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FMNL3-CPNE8 FMNL3 chr12 50100838 - CPNE8 chr12 39071356 - Exonic hg19 SKCM TCGA-GN-A264-06A 7 3 Out-of-frame Intra-chr q13.12 q12 Seq+ 63067 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FMNL3-RP11-362K2.2 FMNL3 chr12 50059615 - RP11-362K2.2 chr12 58937907 + Exonic hg19 SARC TCGA-DX-A1KW-01A 3 75 Out-of-frame Intra-chr q13.12 63068 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FMO2-C1orf129 FMO2 chr1 171174773 - C1orf129 chr1 171031273 + Exonic hg19 CESC TCGA-FU-A23L-01A 7 1 In-Frame Intra-chr q24.3 63069 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FMOD-ARFGEF2 FMOD chr1 203309756 - ARFGEF2 chr20 47615777 + Exonic hg19 PRAD TCGA-H9-7775-01A 2 6 Out-of-frame Inter-chr q32.1 q13.13 63070 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FMOD-THSD4 FMOD chr1 203309756 - THSD4 chr15 72072881 + Exonic hg19 PRAD TCGA-G9-6384-01A 2 16 Out-of-frame Inter-chr q32.1 q23 63071 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FN1-ARFGEF2 FN1 chr2 216225181 - ARFGEF2 chr20 47615777 + Exonic hg19 THCA TCGA-DJ-A3V0-01A 2 10 Out-of-frame Inter-chr q35 Oncogene q13.13 63072 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FN1-ATP2B4 FN1 chr2 216225177 - ATP2B4 chr1 203671172 + Exonic hg19 THCA TCGA-EL-A3ZK-01A 2 1 3'UTR-CDS Inter-chr q35 Oncogene q32.1 63073 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FN1-EIF2AK2 FN1 chr2 216225163 - EIF2AK2 chr2 37342384 - Exonic hg19 BRCA TCGA-A8-A097-01A 2 2 Out-of-frame Intra-chr q35 Oncogene p22.2 63074 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FN1-PECR FN1 chr2 216242898 - PECR chr2 216931241 - Exonic hg19 LUSC TCGA-37-4130-01A 46 39 In-Frame Intra-chr q35 Oncogene q35 Seq+ 63075 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FN1-UTRN FN1 chr2 216225181 - UTRN chr6 144665237 + Exonic hg19 LUSC TCGA-85-7950-01A 2 2 Out-of-frame Inter-chr q35 Oncogene q24.2 63076 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FN1-WDSUB1 FN1 chr2 216298047 - WDSUB1 chr2 160105023 - Exonic hg19 KIRC TCGA-BP-5196-01A 355 266 In-Frame Intra-chr q35 Oncogene q24.2 Seq+ 63077 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FN1-ZNFX1 FN1 chr2 216225181 - ZNFX1 chr20 47863418 - Exonic hg19 BLCA TCGA-BT-A20O-01A 2 1 Out-of-frame Inter-chr q35 Oncogene q13.13 63078 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FN3K-HEXDC FN3K chr17 80693653 - HEXDC chr17 80397507 + Exonic hg19 OV TCGA-VG-A8LO-01A 3 56 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 63079 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FN3K-MYO16 FN3K chr17 80706853 - MYO16 chr13 109535407 + Exonic hg19 CESC TCGA-FU-A3NI-01A 7 3 In-Frame Inter-chr q25.3 Seq+ 63080 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FN3KRP-KCNQ1 FN3KRP chr17 80684478 - KCNQ1 chr11 2868997 + Exonic hg19 ACC TCGA-OR-A5KX-01A 25 10 In-Frame Inter-chr q25.3 p15.5 Seq+ 63081 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNBP4-INSL3 FNBP4 chr11 47752926 - INSL3 chr19 17927868 - Exonic hg19 UCEC TCGA-AJ-A3NH-01A 100 78 In-Frame Inter-chr p11.2 p13.11 Seq+ 63082 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNBP4-PVRL1 FNBP4 chr11 47786822 - PVRL1 chr11 119548567 - Exonic hg19 LUSC TCGA-96-7544-01A 81 73 In-Frame Intra-chr p11.2 Seq+ 63083 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNDC3A-C14orf159 FNDC3A chr13 49550313 - C14orf159 chr14 91633569 + Exonic hg19 PCPG TCGA-QR-A70G-01B 4 5 5'UTR-CDS Inter-chr q14.2 q32.11 Seq+ 63084 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNDC3A-LPAR6 FNDC3A chr13 49688867 - LPAR6 chr13 48991456 - Exonic hg19 SARC TCGA-3B-A9HR-01A 21 12 CDS-5'UTR Intra-chr q14.2 q14.2 Seq+ 63085 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNDC3A-RB1 FNDC3A chr13 49551053 - RB1 chr13 48881416 + Exonic hg19 CESC TCGA-C5-A3HE-01A 4 2 5'UTR-CDS Intra-chr q14.2 q14.2 Oncogene Tumor suppressor gene Seq+ 63086 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNDC3A-RB1 FNDC3A chr13 49688867 - RB1 chr13 49037867 + Exonic hg19 BRCA TCGA-C8-A12K-01A 32 32 In-Frame Intra-chr q14.2 q14.2 Oncogene Tumor suppressor gene Seq+ 63087 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNDC3B-BCHE FNDC3B chr3 171851336 - BCHE chr3 165504099 - Exonic hg19 KIRP TCGA-G7-6793-01A 191 167 Out-of-frame Intra-chr q26.31 q26.1 Seq+ 63088 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNDC3B-EMP3 FNDC3B chr3 171969331 - EMP3 chr19 48832609 + Exonic hg19 BLCA TCGA-FD-A5BT-01A 75 50 In-Frame Inter-chr q26.31 q13.33 Seq+ 63089 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNDC3B-FGF12 FNDC3B chr3 171851336 - FGF12 chr3 192078327 - Exonic hg19 SARC TCGA-DX-AB2F-01A 33 27 In-Frame Intra-chr q26.31 q29 Seq+ 63090 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNDC3B-KHDRBS3 FNDC3B chr3 171757561 - KHDRBS3 chr8 136619198 + Exonic hg19 LUAD TCGA-78-7147-01A 310 204 5'UTR-CDS Inter-chr q26.31 q24.23 Seq+ 63091 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNDC3B-NAALADL2 FNDC3B chr3 171757561 - NAALADL2 chr3 174814580 + Exonic hg19 LUSC TCGA-21-1077-01A 24 18 5'UTR-CDS Intra-chr q26.31 q26.31 Seq+ 63092 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNDC3B-NLGN1 FNDC3B chr3 171944737 - NLGN1 chr3 173993105 + Exonic hg19 BRCA TCGA-AO-A03P-01A 7 3 Out-of-frame Intra-chr q26.31 q26.31 Seq+ 63093 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNDC3B-PGM5 FNDC3B chr3 171851336 - PGM5 chr9 71094334 + Exonic hg19 SKCM TCGA-EB-A5UL-06A 6 2 In-Frame Inter-chr q26.31 q21.11 Seq+ 63094 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNDC3B-PIK3CA FNDC3B chr3 171851336 - PIK3CA chr3 178916538 + Exonic hg19 UCEC TCGA-BK-A56F-01A 8 16 CDS-5'UTR Intra-chr q26.31 q26.32 Oncogene Seq+ 63095 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNDC3B-RP11-211G3.3 FNDC3B chr3 172062048 - RP11-211G3.3 chr3 187433410 + Exonic hg19 LIHC TCGA-DD-AADF-01A 7 1 Out-of-frame Intra-chr q26.31 63096 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNDC3B-SLC7A14 FNDC3B chr3 171757561 - SLC7A14 chr3 170204157 - Exonic hg19 LUSC TCGA-51-6867-01A 191 201 5'UTR-CDS Intra-chr q26.31 q26.2 Seq+ 63097 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNDC3B-SPATA16 FNDC3B chr3 171757561 - SPATA16 chr3 172607482 - Exonic hg19 LUSC TCGA-46-6025-01A 2 3 5'UTR-CDS Intra-chr q26.31 q26.31 Seq+ 63098 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNDC3B-SUCNR1 FNDC3B chr3 171851336 - SUCNR1 chr3 151597640 + Exonic hg19 SKCM TCGA-EB-A5UL-06A 4 3 CDS-5'UTR Intra-chr q26.31 q25.1 Seq+ 63099 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNDC3B-TMEM212 FNDC3B chr3 171757561 - TMEM212 chr3 171571317 + Exonic hg19 UCEC TCGA-KP-A3W4-01A 4 2 5'UTR-CDS Intra-chr q26.31 q26.31 Seq+ 63100 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNDC3B-TMEM212 FNDC3B chr3 171851336 - TMEM212 chr3 171569772 + Exonic hg19 PRAD TCGA-ZG-A9KY-01A 7 2 Out-of-frame Intra-chr q26.31 q26.31 Seq+ 63101 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNDC3B-TNIK FNDC3B chr3 171851336 - TNIK chr3 171065007 - Exonic hg19 ESCA TCGA-L5-A88S-01A 5 35 CDS-3'UTR Intra-chr q26.31 q26.31 STE:STE20 Seq+ 63102 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNDC3B-UCK2 FNDC3B chr3 171757561 - UCK2 chr1 165859441 + Exonic hg19 BRCA TCGA-AC-A6IW-01A 7 10 5'UTR-CDS Inter-chr q26.31 q24.1 Seq+ 63103 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNIP1-AHDC1 FNIP1 chr5 131080257 - AHDC1 chr1 27885394 - Exonic hg19 UCS TCGA-N7-A4Y5-01A 10 2 CDS-5'UTR Inter-chr q31.1 p35.3 Transcription factor 63104 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNIP1-FBXO38 FNIP1 chr5 131132523 - FBXO38 chr5 147774277 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 4 1 CDS-5'UTR Intra-chr q31.1 q32 63105 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNIP1-IL5 FNIP1 chr5 131132523 - IL5 chr5 131878818 - Exonic hg19 BLCA TCGA-FJ-A3ZF-01A 5 3 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 63106 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNIP1-SUSD4 FNIP1 chr5 130928076 - SUSD4 chr1 223408442 - Exonic hg19 LUAD TCGA-78-7161-01A 19 7 3'UTR-CDS Inter-chr q31.1 q41 63107 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNIP2-EXOC4 FNIP2 chr4 159690471 - EXOC4 chr7 133622644 + Exonic hg19 SARC TCGA-DX-A8BR-01A 9 5 In-Frame Inter-chr q32.1 q33 Seq+ 63108 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNIP2-FAM159A FNIP2 chr4 159690471 - FAM159A chr1 53108535 + Exonic hg19 LGG TCGA-HT-7475-01A 4 1 In-Frame Inter-chr q32.1 p32.3 Seq+ 63109 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNIP2-LARP7 FNIP2 chr4 159756628 - LARP7 chr4 113571617 + Exonic hg19 BRCA TCGA-AO-A1KR-01A 2 3 In-Frame Intra-chr q32.1 q25 Seq+ 63110 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNIP2-LRAT FNIP2 chr4 159690471 - LRAT chr4 155649855 + Exonic hg19 PRAD TCGA-YJ-A8SW-01A 2 2 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 63111 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNIP2-LRBA FNIP2 chr4 159690471 - LRBA chr4 151242520 - Exonic hg19 BRCA TCGA-BH-A0H7-01A 6 4 Out-of-frame Intra-chr q32.1 q31.3 Seq+ 63112 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNIP2-RXFP1 FNIP2 chr4 159690471 - RXFP1 chr4 159559160 + Exonic hg19 UCS TCGA-NA-A4QY-01A 3 2 In-Frame Intra-chr q32.1 q32.1 Seq+ 63113 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNIP2-SLC35A3 FNIP2 chr4 159817017 - SLC35A3 chr1 100459093 + Exonic hg19 PRAD TCGA-HC-A8CY-01A 2 6 CDS-5'UTR Inter-chr q32.1 p21.2 Seq+ 63114 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNTA-KIAA0146 FNTA chr8 42932507 - KIAA0146 chr8 48192450 + Exonic hg19 LUAD TCGA-69-7760-01A 2 3 Out-of-frame Intra-chr p11.21 Seq+ 63115 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNTA-OVOL1 FNTA chr8 42911689 - OVOL1 chr11 65561502 + Exonic hg19 BRCA TCGA-A7-A3IZ-01A 3 3 Out-of-frame Inter-chr p11.21 q13.1 Transcription factor Seq+ 63116 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FNTA-ZMAT4 FNTA chr8 42932507 - ZMAT4 chr8 40683199 - Exonic hg19 BRCA TCGA-A2-A0EW-01A 4 2 5'UTR-5'UTR Intra-chr p11.21 p11.21 Transcription factor Seq+ 63117 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOSB-ITPKC FOSB chr19 45974207 - ITPKC chr19 41231245 + Exonic hg19 CESC TCGA-C5-A7X3-01A 3 1 In-Frame Intra-chr q13.32 Transcription factor q13.2 63118 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOSL2-BRE FOSL2 chr2 28627225 - BRE chr2 28561317 + Exonic hg19 LUSC TCGA-66-2771-01A 157 87 Out-of-frame Intra-chr p23.2 Transcription factor Seq+ 63119 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOSL2-BRE FOSL2 chr2 28627225 - BRE chr2 28521205 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 2 2 Out-of-frame Intra-chr p23.2 Transcription factor Seq+ 63120 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXA3-RGS6 FOXA3 chr19 46367783 - RGS6 chr14 72921236 + Exonic hg19 HNSC TCGA-QK-A8Z7-01A 5 7 Out-of-frame Inter-chr q13.32 Transcription factor q24.2 Seq+ 63121 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXJ2-LPCAT3 FOXJ2 chr12 8186429 - LPCAT3 chr12 7092700 - Exonic hg19 LUSC TCGA-85-8584-01A 61 15 5'UTR-CDS Intra-chr p13.31 Transcription factor p13.31 63122 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXJ3-CCDC23 FOXJ3 chr1 42800730 - CCDC23 chr1 43282251 - Exonic hg19 OV TCGA-13-0890-01A 5 15 5'UTR-5'UTR Intra-chr p34.2 Transcription factor Seq+ 63123 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXJ3-CCDC23 FOXJ3 chr1 42693554 - CCDC23 chr1 43273171 - Exonic hg19 BLCA TCGA-4Z-AA7Q-01A 88 52 In-Frame Intra-chr p34.2 Transcription factor Seq+ 63124 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXJ3-CLIC6 FOXJ3 chr1 42730786 - CLIC6 chr21 36079578 + Exonic hg19 LUAD TCGA-55-7576-01A 16 17 In-Frame Inter-chr p34.2 Transcription factor q22.12 Seq+ 63125 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXJ3-EIF4G3 FOXJ3 chr1 42801297 - EIF4G3 chr1 21268823 - Exonic hg19 STAD TCGA-BR-8058-01A 5 12 5'UTR-CDS Intra-chr p34.2 Transcription factor p36.12 Seq+ 63126 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXJ3-ELAVL4 FOXJ3 chr1 42776721 - ELAVL4 chr1 50642761 + Exonic hg19 BRCA TCGA-E2-A1LS-01A 2 2 Out-of-frame Intra-chr p34.2 Transcription factor p33 Seq+ 63127 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXJ3-RCOR1 FOXJ3 chr1 42730786 - RCOR1 chr14 103187344 + Exonic hg19 SARC TCGA-DX-AB2O-01A 9 4 In-Frame Inter-chr p34.2 Transcription factor q32.31 Seq+ 63128 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXJ3-ZFYVE9 FOXJ3 chr1 42730786 - ZFYVE9 chr1 52682041 + Exonic hg19 BRCA TCGA-AR-A24Z-01A 9 2 CDS-5'UTR Intra-chr p34.2 Transcription factor p32.3 Seq+ 63129 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXJ3-ZMYND12 FOXJ3 chr1 42744019 - ZMYND12 chr1 42902214 - Exonic hg19 LIHC TCGA-DD-A11A-01A 3 1 In-Frame Intra-chr p34.2 Transcription factor p34.2 Seq+ 63130 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXJ3-ZMYND12 FOXJ3 chr1 42776721 - ZMYND12 chr1 42915730 - Exonic hg19 UCS TCGA-N9-A4Q8-01A 3 1 In-Frame Intra-chr p34.2 Transcription factor p34.2 Seq+ 63131 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXJ3-ZNF362 FOXJ3 chr1 42730786 - ZNF362 chr1 33741701 + Exonic hg19 BRCA TCGA-E9-A1R7-01A 3 5 Out-of-frame Intra-chr p34.2 Transcription factor p35.1 Transcription factor Seq+ 63132 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXK1-THSD7A FOXK1 chr7 4780654 - THSD7A chr7 11422243 - Exonic hg19 SKCM TCGA-EB-A44R-06A 24 10 Out-of-frame Intra-chr p22.1 Transcription factor p21.3 Seq+ 63133 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXK1-ZNF671 FOXK1 chr7 4722499 - ZNF671 chr19 58234708 - Exonic hg19 BRCA TCGA-S3-AA10-01A 2 5 Out-of-frame Inter-chr p22.1 Transcription factor q13.43 Transcription factor Seq+ 63134 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXK2-ABCA5 FOXK2 chr17 80542064 - ABCA5 chr17 67273983 - Exonic hg19 BRCA TCGA-D8-A27N-01A 16 12 In-Frame Intra-chr q25.3 Transcription factor q24.3 Seq+ 63135 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXK2-ABR FOXK2 chr17 80545148 - ABR chr17 986867 - Exonic hg19 SARC TCGA-IE-A3OV-01A 12 8 Out-of-frame Intra-chr q25.3 Transcription factor p13.3 Seq+ 63136 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXK2-AMBRA1 FOXK2 chr17 80478183 - AMBRA1 chr11 46419493 - Exonic hg19 CESC TCGA-VS-A9V0-01A 13 7 Out-of-frame Inter-chr q25.3 Transcription factor p11.2 Seq+ 63137 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXK2-APOBEC1 FOXK2 chr17 80521424 - APOBEC1 chr12 7805431 - Exonic hg19 SARC TCGA-DX-A6BH-01A 4 1 In-Frame Inter-chr q25.3 Transcription factor p13.31 63138 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXK2-C17orf101 FOXK2 chr17 80478183 - C17orf101 chr17 80367286 - Exonic hg19 BLCA TCGA-XF-AAMX-01A 28 27 In-Frame Intra-chr q25.3 Transcription factor Seq+ 63139 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXK2-GNG7 FOXK2 chr17 80521424 - GNG7 chr19 2520723 - Exonic hg19 LIHC TCGA-BC-A10T-01A 5 4 CDS-5'UTR Inter-chr q25.3 Transcription factor p13.3 Seq+ 63140 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXK2-HEXDC FOXK2 chr17 80521424 - HEXDC chr17 80382270 + Exonic hg19 UCEC TCGA-AX-A3FX-01A 3 1 Out-of-frame Intra-chr q25.3 Transcription factor q25.3 Seq+ 63141 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXK2-MADCAM1 FOXK2 chr17 80478183 - MADCAM1 chr19 501669 + Exonic hg19 BRCA TCGA-B6-A3ZX-01A 4 4 Out-of-frame Inter-chr q25.3 Transcription factor p13.3 Seq+ 63142 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXK2-MS4A12 FOXK2 chr17 80521424 - MS4A12 chr11 60264786 + Exonic hg19 SKCM TCGA-3N-A9WC-06A 14 13 CDS-5'UTR Inter-chr q25.3 Transcription factor q12.2 Seq+ 63143 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXK2-NARF FOXK2 chr17 80478183 - NARF chr17 80436676 + Exonic hg19 OV TCGA-24-1428-01A 14 10 Out-of-frame Intra-chr q25.3 Transcription factor q25.3 Seq+ 63144 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXK2-NARF FOXK2 chr17 80542064 - NARF chr17 80441592 + Exonic hg19 UCEC TCGA-AJ-A3IA-01A 3 2 In-Frame Intra-chr q25.3 Transcription factor q25.3 Seq+ 63145 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXK2-PITPNC1 FOXK2 chr17 80545148 - PITPNC1 chr17 65665624 + Exonic hg19 BRCA TCGA-C8-A1HO-01A 9 4 Out-of-frame Intra-chr q25.3 Transcription factor q24.2 Seq+ 63146 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXK2-RNF213 FOXK2 chr17 80478183 - RNF213 chr17 78261614 + Exonic hg19 STAD TCGA-BR-8590-01A 4 9 Out-of-frame Intra-chr q25.3 Transcription factor q25.3 Oncogene Seq+ 63147 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXK2-SKAP1 FOXK2 chr17 80545148 - SKAP1 chr17 46474147 - Exonic hg19 BRCA TCGA-AO-A0JG-01A 87 38 In-Frame Intra-chr q25.3 Transcription factor q21.32 Seq+ 63148 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXK2-SPECC1 FOXK2 chr17 80529746 - SPECC1 chr17 19999944 + Exonic hg19 SARC TCGA-IE-A3OV-01A 51 26 CDS-5'UTR Intra-chr q25.3 Transcription factor p11.2 Seq+ 63149 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXK2-TIAF1 FOXK2 chr17 80545148 - TIAF1 chr17 27409456 - Exonic hg19 BRCA TCGA-A8-A08O-01A 49 18 Out-of-frame Intra-chr q25.3 Transcription factor q11.2 Oncogene 63150 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXK2-TNFSF12-TNFSF13 FOXK2 chr17 80478183 - TNFSF12-TNFSF13 chr17 7462941 + Exonic hg19 ACC TCGA-OR-A5LO-01A 7 2 Out-of-frame Intra-chr q25.3 Transcription factor p13.1 Tumor suppressor gene 63151 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXM1-SLC2A14 FOXM1 chr12 2977729 - SLC2A14 chr12 7970630 - Exonic hg19 GBM TCGA-06-0238-01A 2 1 In-Frame Intra-chr p13.33 Transcription factor p13.31 Seq+ 63152 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXN2-PLB1 FOXN2 chr2 48541953 - PLB1 chr2 28863793 + Exonic hg19 HNSC TCGA-BA-7269-01A 55 54 5'UTR-CDS Intra-chr p16.3 Transcription factor p23.2 Seq+ 63153 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXN2-SPTBN1 FOXN2 chr2 48573890 - SPTBN1 chr2 54849437 + Exonic hg19 LUSC TCGA-60-2715-01A 8 4 In-Frame Intra-chr p16.3 Transcription factor p16.2 Tumor suppressor gene Seq+ 63154 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXN3-CDKL1 FOXN3 chr14 89878278 - CDKL1 chr14 50796899 - Exonic hg19 COAD TCGA-A6-5667-01A 34 22 In-Frame Intra-chr q32.11 Transcription factor q22.1 CMGC:CDKL Seq+ 63155 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXN3-KCNQ1 FOXN3 chr14 89747294 - KCNQ1 chr11 2790074 + Exonic hg19 PRAD TCGA-V1-A8MG-01A 7 3 Out-of-frame Inter-chr q32.11 Transcription factor p15.5 Seq+ 63156 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXN3-RP11-944C7.1 FOXN3 chr14 90085372 - RP11-944C7.1 chr14 90095480 - Exonic hg19 LUSC TCGA-56-7730-01A 2 3 Out-of-frame Intra-chr q32.11 Transcription factor 63157 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXN3-RP11-944C7.1 FOXN3 chr14 90085372 - RP11-944C7.1 chr14 90095480 - Exonic hg19 SKCM TCGA-ER-A194-01A 4 4 Out-of-frame Intra-chr q32.11 Transcription factor 63158 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXN3-SLC25A21 FOXN3 chr14 89656728 - SLC25A21 chr14 37344209 - Exonic hg19 LUAD TCGA-44-7669-01A 31 20 In-Frame Intra-chr q32.11 Transcription factor q13.3 Seq+ 63159 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXO1-ELF1 FOXO1 chr13 41239720 - ELF1 chr13 41533152 - Exonic hg19 LUSC TCGA-60-2706-01A 8 7 In-Frame Intra-chr q14.11 Oncogene Tumor suppressor gene Transcription factor q14.11 Transcription factor Seq+ 63160 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXO1-MRPS31 FOXO1 chr13 41239720 - MRPS31 chr13 41303737 - Exonic hg19 LIHC TCGA-QA-A7B7-01A 40 17 Out-of-frame Intra-chr q14.11 Oncogene Tumor suppressor gene Transcription factor q14.11 Seq+ 63161 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXO1-WDFY2 FOXO1 chr13 41239720 - WDFY2 chr13 52234732 + Exonic hg19 STAD TCGA-BR-8678-01A 2 4 Out-of-frame Intra-chr q14.11 Oncogene Tumor suppressor gene Transcription factor q14.3 Seq+ 63162 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXO3-CHD7 FOXO3 chr6 108883032 - CHD7 chr8 61653818 + Exonic hg19 BRCA TCGA-AR-A1AU-01A 2 1 CDS-5'UTR Inter-chr q21 Oncogene Tumor suppressor gene Transcription factor q12.2 Seq+ 63163 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXO3-LACE1 FOXO3 chr6 108883032 - LACE1 chr6 108840900 + Exonic hg19 ACC TCGA-OR-A5LO-01A 5 3 In-Frame Intra-chr q21 Oncogene Tumor suppressor gene Transcription factor Seq+ 63164 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXP1-ACTR3B FOXP1 chr3 71408301 - ACTR3B chr7 152549211 + Exonic hg19 PRAD TCGA-J9-A8CK-01A 10 3 5'UTR-CDS Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor q36.1 63165 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXP1-ARMC8 FOXP1 chr3 71247353 - ARMC8 chr3 137928659 + Exonic hg19 BRCA TCGA-HN-A2NL-01A 3 1 In-Frame Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor q22.3 63166 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXP1-C5orf51 FOXP1 chr3 71348971 - C5orf51 chr5 41907838 + Exonic hg19 BRCA TCGA-BH-A1FE-01A 4 2 5'UTR-CDS Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor p13.1 Seq+ 63167 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXP1-COQ10B FOXP1 chr3 71090479 - COQ10B chr2 198334794 + Exonic hg19 PRAD TCGA-J4-A83N-01A 6 4 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor q33.1 Seq+ 63168 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXP1-EIF4E3 FOXP1 chr3 71542577 - EIF4E3 chr3 71759635 - Exonic hg19 BRCA TCGA-A7-A3J0-01A 4 3 5'UTR-5'UTR Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor p13 Seq+ 63169 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXP1-EIF4E3 FOXP1 chr3 71542577 - EIF4E3 chr3 71777774 - Exonic hg19 BRCA TCGA-BH-A18V-01A 54 28 5'UTR-5'UTR Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor p13 Seq+ 63170 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXP1-EIF4E3 FOXP1 chr3 71542577 - EIF4E3 chr3 71777774 - Exonic hg19 BRCA TCGA-BH-A18V-06A 15 18 5'UTR-5'UTR Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor p13 Seq+ 63171 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXP1-EIF4E3 FOXP1 chr3 71542577 - EIF4E3 chr3 71777774 - Exonic hg19 HNSC TCGA-CV-A45X-01A 3 1 5'UTR-5'UTR Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor p13 Seq+ 63172 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXP1-EIF4E3 FOXP1 chr3 71630700 - EIF4E3 chr3 71759635 - Exonic hg19 BRCA TCGA-E9-A1RB-01A 11 9 5'UTR-5'UTR Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor p13 Seq+ 63173 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXP1-FHIT FOXP1 chr3 71348971 - FHIT chr3 59908140 - Exonic hg19 THYM TCGA-ZB-A969-01A 41 17 5'UTR-CDS Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor p14.2 Tumor suppressor gene Seq+ 63174 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXP1-HRH1 FOXP1 chr3 71247353 - HRH1 chr3 11300689 + Exonic hg19 PRAD TCGA-YL-A8SA-01A 3 2 CDS-5'UTR Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor p25.3 Seq+ 63175 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXP1-PXDNL FOXP1 chr3 71542577 - PXDNL chr8 52412330 - Exonic hg19 HNSC TCGA-CN-5370-01A 6 4 5'UTR-CDS Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor q11.23 Seq+ 63176 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXP1-RGAG4 FOXP1 chr3 71542577 - RGAG4 chrX 71347560 - Exonic hg19 BRCA TCGA-BH-A0BR-01A 46 31 5'UTR-3'UTR Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 63177 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXP1-RUFY1 FOXP1 chr3 71348971 - RUFY1 chr5 179036377 + Exonic hg19 OV TCGA-13-0916-01A 2 7 5'UTR-CDS Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 63178 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXP1-SH3RF2 FOXP1 chr3 71090479 - SH3RF2 chr5 145379621 + Exonic hg19 CHOL TCGA-WD-A7RX-01A 2 5 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor q32 Seq+ 63179 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXP1-UBA3 FOXP1 chr3 71542577 - UBA3 chr3 69112654 - Exonic hg19 CESC TCGA-ZJ-AAXB-01A 2 2 5'UTR-CDS Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor p14.1 Seq+ 63180 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXP1-UGGT1 FOXP1 chr3 71037145 - UGGT1 chr2 128941249 + Exonic hg19 PRAD TCGA-VP-A87K-01A 9 6 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor q14.3 Seq+ 63181 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXP2-ENKUR FOXP2 chr7 114006695 - ENKUR chr10 25288475 - Exonic hg19 PRAD TCGA-V1-A9ZK-01A 6 4 5'UTR-CDS Inter-chr q31.1 Transcription factor p12.1 Seq+ 63182 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXP2-EPM2A FOXP2 chr7 113803143 - EPM2A chr6 145823711 - Exonic hg19 SARC TCGA-DX-A6BH-01A 2 2 Out-of-frame Inter-chr q31.1 Transcription factor q24.3 Seq+ 63183 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXP4-DNAH8 FOXP4 chr6 41514605 - DNAH8 chr6 38950122 + Exonic hg19 PRAD TCGA-KK-A8ID-01A 3 10 5'UTR-CDS Intra-chr p21.1 Oncogene Transcription factor p21.2 Seq+ 63184 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FOXRED2-IFT27 FOXRED2 chr22 36897288 - IFT27 chr22 37163906 - Exonic hg19 STAD TCGA-VQ-A8E2-01A 3 16 In-Frame Intra-chr q12.3 q12.3 Seq+ 63185 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRA10AC1-PDE6C FRA10AC1 chr10 95430527 - PDE6C chr10 95418658 + Exonic hg19 PRAD TCGA-EJ-A65J-01A 9 6 In-Frame Intra-chr q23.33 q23.33 Seq+ 63186 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRAS1-ART3 FRAS1 chr4 78987170 - ART3 chr4 77033539 + Exonic hg19 UCS TCGA-NG-A4VU-01A 8 3 Out-of-frame Intra-chr q21.21 q21.1 Seq+ 63187 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRAS1-DCK FRAS1 chr4 79373508 - DCK chr4 71888084 + Exonic hg19 BRCA TCGA-E2-A14Q-01A 4 5 Out-of-frame Intra-chr q21.21 q13.3 Seq+ 63188 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRAS1-FAM190A FRAS1 chr4 78987170 - FAM190A chr4 92519723 + Exonic hg19 BRCA TCGA-D8-A1JA-01A 3 8 In-Frame Intra-chr q21.21 Seq+ 63189 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRAS1-MGMT FRAS1 chr4 79343154 - MGMT chr10 131334505 + Exonic hg19 UCEC TCGA-DI-A2QY-01A 7 5 Out-of-frame Inter-chr q21.21 q26.3 Seq+ 63190 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRAS1-MGST2 FRAS1 chr4 79322041 - MGST2 chr4 140616351 + Exonic hg19 OV TCGA-29-A5NZ-01A 9 53 Out-of-frame Intra-chr q21.21 q31.1 Seq+ 63191 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRAS1-MRPL1 FRAS1 chr4 78987170 - MRPL1 chr4 78870951 + Exonic hg19 LUSC TCGA-66-2756-01A 6 3 In-Frame Intra-chr q21.21 q21.1 Seq+ 63192 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRAS1-MRPL1 FRAS1 chr4 78979239 - MRPL1 chr4 78792898 + Exonic hg19 PRAD TCGA-CH-5794-01A 14 6 In-Frame Intra-chr q21.21 q21.1 Seq+ 63193 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRAS1-SHROOM3 FRAS1 chr4 78987170 - SHROOM3 chr4 77476762 + Exonic hg19 LUAD TCGA-50-6592-01A 16 2 In-Frame Intra-chr q21.21 q21.1 63194 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FREM1-SLAMF7 FREM1 chr9 14851282 - SLAMF7 chr1 160717984 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 2 3 Out-of-frame Inter-chr p22.3 q23.3 Seq+ 63195 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FREM1-UNC13B FREM1 chr9 14909912 - UNC13B chr9 35228012 + Exonic hg19 BLCA TCGA-XF-AAMX-01A 6 3 5'UTR-CDS Intra-chr p22.3 p13.3 Seq+ 63196 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FREM2-SNAP29 FREM2 chr13 39271924 - SNAP29 chr22 21241967 + Exonic hg19 SKCM TCGA-EE-A184-06A 149 103 In-Frame Inter-chr q13.3 q11.21 Seq+ 63197 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRK-BEND3 FRK chr6 116381131 - BEND3 chr6 107420500 - Exonic hg19 CHOL TCGA-ZH-A8Y1-01A 2 2 CDS-5'UTR Intra-chr q22.1 TK:Src Tumor suppressor gene q21 Seq+ 63198 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRK-DTNBP1 FRK chr6 116381131 - DTNBP1 chr6 15533626 - Exonic hg19 BRCA TCGA-AQ-A1H2-01A 3 9 Out-of-frame Intra-chr q22.1 TK:Src Tumor suppressor gene p22.3 Seq+ 63199 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRK-SYT1 FRK chr6 116288714 - SYT1 chr12 79611283 + Exonic hg19 SARC TCGA-IF-A3RQ-01A 4 1 CDS-5'UTR Inter-chr q22.1 TK:Src Tumor suppressor gene q21.2 Seq+ 63200 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRMD4A-APBB1IP FRMD4A chr10 13716911 - APBB1IP chr10 26800676 + Exonic hg19 SKCM TCGA-ER-A196-01A 51 20 In-Frame Intra-chr p13 p12.1 Seq+ 63201 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRMD4A-C10orf112 FRMD4A chr10 13735898 - C10orf112 chr10 19780446 + Exonic hg19 LGG TCGA-FG-A4MT-01A 2 1 Out-of-frame Intra-chr p13 63202 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRMD4A-FAM107B FRMD4A chr10 14372057 - FAM107B chr10 14572514 - Exonic hg19 MESO TCGA-TS-A8AI-01A 20 11 Out-of-frame Intra-chr p13 p13 Seq+ 63203 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRMD4A-OR13A1 FRMD4A chr10 14050059 - OR13A1 chr10 45799948 - Exonic hg19 LGG TCGA-DU-6403-01A 2 8 Out-of-frame Intra-chr p13 Seq+ 63204 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRMD4A-PLXDC2 FRMD4A chr10 14050059 - PLXDC2 chr10 20465928 + Exonic hg19 SKCM TCGA-EE-A2MS-06A 4 1 Out-of-frame Intra-chr p13 p12.31 63205 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRMD4A-TMEM45B FRMD4A chr10 14372057 - TMEM45B chr11 129722370 + Exonic hg19 OV TCGA-04-1362-01A 4 4 CDS-5'UTR Inter-chr p13 q24.3 Seq+ 63206 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRMD4B-ABCA5 FRMD4B chr3 69336903 - ABCA5 chr17 67252424 - Exonic hg19 SKCM TCGA-WE-A8ZR-06A 13 3 Out-of-frame Inter-chr p14.1 q24.3 Seq+ 63207 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRMD4B-OXCT1 FRMD4B chr3 69267473 - OXCT1 chr5 41801172 - Exonic hg19 PAAD TCGA-HZ-8636-01A 2 8 In-Frame Inter-chr p14.1 p13.1 Seq+ 63208 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRMD4B-PPP2R3A FRMD4B chr3 69271009 - PPP2R3A chr3 135863885 + Exonic hg19 LUSC TCGA-66-2785-01A 6 1 In-Frame Intra-chr p14.1 q22.2 Seq+ 63209 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRMD5-ARNT2 FRMD5 chr15 44487151 - ARNT2 chr15 80743221 + Exonic hg19 LGG TCGA-TM-A7CF-01A 2 1 Out-of-frame Intra-chr q15.3 q25.1 Transcription factor Seq+ 63210 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRMD5-EIF2C3 FRMD5 chr15 44487151 - EIF2C3 chr1 36411293 + Exonic hg19 BRCA TCGA-AN-A0AT-01A 4 3 Out-of-frame Inter-chr q15.3 63211 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRMD6-BPIFB1 FRMD6 chr14 52037128 - BPIFB1 chr20 31873839 + Exonic hg19 HNSC TCGA-CQ-6227-01A 171 28 5'UTR-5'UTR Inter-chr q22.1 q11.21 Seq+ 63212 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRMD6-RTN4 FRMD6 chr14 52037128 - RTN4 chr2 55214834 - Exonic hg19 BLCA TCGA-CF-A1HS-01A 8 6 5'UTR-CDS Inter-chr q22.1 p16.1 Tumor suppressor gene Seq+ 63213 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRMD6-SCFD1 FRMD6 chr14 52118714 - SCFD1 chr14 31163979 + Exonic hg19 LUAD TCGA-44-7670-01A 33 16 5'UTR-5'UTR Intra-chr q22.1 q12 Seq+ 63214 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRMD8-C11orf2 FRMD8 chr11 65156999 - C11orf2 chr11 64875053 + Exonic hg19 UCEC TCGA-FI-A3PV-01A 5 2 In-Frame Intra-chr q13.1 63215 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRMD8-DPF2 FRMD8 chr11 65154592 - DPF2 chr11 65119154 + Exonic hg19 LUAD TCGA-93-A4JO-01A 35 18 In-Frame Intra-chr q13.1 q13.1 Seq+ 63216 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRMD8-DPF2 FRMD8 chr11 65172539 - DPF2 chr11 65119154 + Exonic hg19 LIHC TCGA-DD-A11C-01A 2 3 In-Frame Intra-chr q13.1 q13.1 Seq+ 63217 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRMD8-MARK2 FRMD8 chr11 65154592 - MARK2 chr11 63662631 + Exonic hg19 STAD TCGA-VQ-A92D-01A 2 38 Out-of-frame Intra-chr q13.1 q13.1 CAMK:CAMKL Seq+ 63218 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRMD8-MAST1 FRMD8 chr11 65164491 - MAST1 chr19 12969176 + Exonic hg19 BRCA TCGA-B6-A0I1-01A 13 6 Out-of-frame Inter-chr q13.1 p13.13 AGC:MAST Seq+ 63219 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-ACSS2 FRS2 chr12 69864310 - ACSS2 chr20 33511126 + Exonic hg19 LUAD TCGA-78-7143-01A 5 2 5'UTR-CDS Inter-chr q15 q11.22 Seq+ 63220 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-ACSS3 FRS2 chr12 69864310 - ACSS3 chr12 81528595 + Exonic hg19 SARC TCGA-DX-A7EI-01A 85 50 5'UTR-CDS Intra-chr q15 q21.31 Seq+ 63221 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-AKAP12 FRS2 chr12 69925836 - AKAP12 chr6 151626882 + Exonic hg19 SARC TCGA-DX-A6BH-01A 72 63 5'UTR-CDS Inter-chr q15 q25.1 Tumor suppressor gene Seq+ 63222 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-ATXN1 FRS2 chr12 69864310 - ATXN1 chr6 16522919 - Exonic hg19 SARC TCGA-DX-A1L3-01A 127 23 5'UTR-5'UTR Inter-chr q15 p22.3 Seq+ 63223 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-AVIL FRS2 chr12 69931763 - AVIL chr12 58193703 - Exonic hg19 SARC TCGA-3B-A9HO-01A 591 29 5'UTR-CDS Intra-chr q15 q14.1 Seq+ 63224 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-BEST3 FRS2 chr12 69925836 - BEST3 chr12 70037567 - Exonic hg19 BLCA TCGA-ZF-A9RC-01A 18 3 Out-of-frame Intra-chr q15 q15 Seq+ 63225 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-C12orf63 FRS2 chr12 69864310 - C12orf63 chr12 97098521 + Exonic hg19 SARC TCGA-DX-A3M1-01A 309 88 Out-of-frame Intra-chr q15 63226 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-C12orf63 FRS2 chr12 69931763 - C12orf63 chr12 96934615 + Exonic hg19 SARC TCGA-DX-AB2F-01A 11 7 Out-of-frame Intra-chr q15 63227 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-C12orf66 FRS2 chr12 69864310 - C12orf66 chr12 64609743 - Exonic hg19 SARC TCGA-DX-A2J4-01A 14 8 5'UTR-CDS Intra-chr q15 q14.2 63228 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-C1orf141 FRS2 chr12 69931763 - C1orf141 chr1 67577327 - Exonic hg19 SARC TCGA-DX-A6BF-01A 2 2 Out-of-frame Inter-chr q15 p31.3 Seq+ 63229 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-CHMP1A FRS2 chr12 69864310 - CHMP1A chr16 89713739 - Exonic hg19 SARC TCGA-DX-A3LY-01B 4 2 5'UTR-CDS Inter-chr q15 q24.3 63230 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-CPM FRS2 chr12 69864310 - CPM chr12 69279669 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 194 37 5'UTR-CDS Intra-chr q15 q15 Seq+ 63231 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-DNM2 FRS2 chr12 69864310 - DNM2 chr19 10904396 + Exonic hg19 SARC TCGA-FX-A3NK-01A 124 44 5'UTR-CDS Inter-chr q15 p13.2 Seq+ 63232 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-DRAM1 FRS2 chr12 69925836 - DRAM1 chr12 102291641 + Exonic hg19 BLCA TCGA-GC-A3RD-01A 64 160 5'UTR-CDS Intra-chr q15 q23.2 Seq+ 63233 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-DTX3 FRS2 chr12 69864310 - DTX3 chr12 58002303 + Exonic hg19 GBM TCGA-41-2571-01A 707 1579 5'UTR-CDS Intra-chr q15 q13.3 Seq+ 63234 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-EMR1 FRS2 chr12 69864310 - EMR1 chr19 6928156 + Exonic hg19 SARC TCGA-3B-A9HJ-01A 13 2 5'UTR-CDS Inter-chr q15 63235 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-FBRSL1 FRS2 chr12 69864310 - FBRSL1 chr12 133124589 + Exonic hg19 SARC TCGA-3B-A9HJ-01A 4 2 5'UTR-CDS Intra-chr q15 q24.33 Seq+ 63236 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-GLIPR1L2 FRS2 chr12 69864310 - GLIPR1L2 chr12 75816684 + Exonic hg19 SARC TCGA-DX-A6BF-01A 63 38 5'UTR-CDS Intra-chr q15 q21.2 Seq+ 63237 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-GRIP1 FRS2 chr12 69864310 - GRIP1 chr12 66800208 - Exonic hg19 LGG TCGA-DU-A5TY-01A 20 6 5'UTR-CDS Intra-chr q15 q14.3 Seq+ 63238 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-HMGA2 FRS2 chr12 69864310 - HMGA2 chr12 66232299 + Exonic hg19 SARC TCGA-DX-A3M1-01A 2 31 5'UTR-CDS Intra-chr q15 q14.3 Transcription factor Seq+ 63239 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-KIF5A FRS2 chr12 69864310 - KIF5A chr12 57957222 + Exonic hg19 GBM TCGA-06-0129-01A 12 29 5'UTR-CDS Intra-chr q15 q13.3 Seq+ 63240 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-KIF5A FRS2 chr12 69931763 - KIF5A chr12 57957222 + Exonic hg19 SARC TCGA-DX-A3U5-01A 10 3 5'UTR-CDS Intra-chr q15 q13.3 Seq+ 63241 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-LACRT FRS2 chr12 69864310 - LACRT chr12 55027017 - Exonic hg19 BLCA TCGA-S5-A6DX-01A 34 10 5'UTR-CDS Intra-chr q15 q13.2 Seq+ 63242 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-LEMD3 FRS2 chr12 69864310 - LEMD3 chr12 65632282 + Exonic hg19 SARC TCGA-3R-A8YX-01A 14 3 5'UTR-CDS Intra-chr q15 q14.3 Seq+ 63243 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-LYZ FRS2 chr12 69864310 - LYZ chr12 69743888 + Exonic hg19 LUAD TCGA-69-7760-01A 6 3 5'UTR-CDS Intra-chr q15 q15 Seq+ 63244 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-LYZ FRS2 chr12 69925836 - LYZ chr12 69743888 + Exonic hg19 BRCA TCGA-A8-A06Z-01A 2368 1840 5'UTR-CDS Intra-chr q15 q15 Seq+ 63245 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-LYZ FRS2 chr12 69925836 - LYZ chr12 69743888 + Exonic hg19 BRCA TCGA-A8-A07O-01A 51 24 5'UTR-CDS Intra-chr q15 q15 Seq+ 63246 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-MDM2 FRS2 chr12 69925836 - MDM2 chr12 69202988 + Exonic hg19 LUAD TCGA-49-4501-01A 10 5 5'UTR-CDS Intra-chr q15 q15 Oncogene Seq+ 63247 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-MMP19 FRS2 chr12 69864310 - MMP19 chr12 56236222 - Exonic hg19 PAAD TCGA-HZ-A49I-01A 8 2 5'UTR-CDS Intra-chr q15 q13.2 Seq+ 63248 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-MSRB3 FRS2 chr12 69864310 - MSRB3 chr12 65881784 + Exonic hg19 GBM TCGA-06-0138-01A 307 2346 Out-of-frame Intra-chr q15 q14.3 63249 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-NRG3 FRS2 chr12 69925836 - NRG3 chr10 84498333 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 8 5 5'UTR-CDS Inter-chr q15 q23.1 Seq+ 63250 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-NTN4 FRS2 chr12 69864310 - NTN4 chr12 96063922 - Exonic hg19 ACC TCGA-OR-A5JA-01A 2 1 5'UTR-CDS Intra-chr q15 q22 Seq+ 63251 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-NUP107 FRS2 chr12 69864310 - NUP107 chr12 69135593 + Exonic hg19 SARC TCGA-DX-A3U6-01A 4 5 5'UTR-CDS Intra-chr q15 q15 Seq+ 63252 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-NUP107 FRS2 chr12 69925836 - NUP107 chr12 69135593 + Exonic hg19 BLCA TCGA-GC-A3RD-01A 220 13 5'UTR-CDS Intra-chr q15 q15 Seq+ 63253 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-OS9 FRS2 chr12 69864310 - OS9 chr12 58088533 + Exonic hg19 LUAD TCGA-86-8585-01A 16 7 5'UTR-CDS Intra-chr q15 q13.3 63254 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-OSBPL8 FRS2 chr12 69924740 - OSBPL8 chr12 76750508 - Exonic hg19 BRCA TCGA-BH-A1EV-01A 36 22 5'UTR-CDS Intra-chr q15 q21.2 Seq+ 63255 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-PARP1 FRS2 chr12 69864310 - PARP1 chr1 226558218 - Exonic hg19 SARC TCGA-DX-A7EI-01A 347 207 5'UTR-CDS Inter-chr q15 q42.12 Oncogene Tumor suppressor gene Seq+ 63256 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-PIP4K2C FRS2 chr12 69962876 - PIP4K2C chr12 57994107 + Exonic hg19 LUAD TCGA-55-7907-01A 20 14 In-Frame Intra-chr q15 q13.3 Seq+ 63257 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-PLEKHG7 FRS2 chr12 69864310 - PLEKHG7 chr12 93134629 + Exonic hg19 SARC TCGA-DX-A23R-01A 58 16 5'UTR-CDS Intra-chr q15 q22 Seq+ 63258 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-PPP1R9A FRS2 chr12 69864310 - PPP1R9A chr7 94903211 + Exonic hg19 STAD TCGA-CG-4475-01A 11 11 5'UTR-CDS Inter-chr q15 q21.3 Seq+ 63259 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-PTPRB FRS2 chr12 69864310 - PTPRB chr12 71003119 - Exonic hg19 STAD TCGA-CG-4475-01A 2 3 5'UTR-CDS Intra-chr q15 q15 Seq+ 63260 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-PTPRQ FRS2 chr12 69864310 - PTPRQ chr12 81072381 + Exonic hg19 SARC TCGA-FX-A3NK-01A 152 39 5'UTR-CDS Intra-chr q15 q21.31 Seq+ 63261 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-PTPRR FRS2 chr12 69925836 - PTPRR chr12 71095103 - Exonic hg19 SARC TCGA-DX-AB35-01A 26 9 5'UTR-CDS Intra-chr q15 q15 Seq+ 63262 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-RASSF3 FRS2 chr12 69864310 - RASSF3 chr12 65078567 + Exonic hg19 PRAD TCGA-HC-8265-01A 11 6 5'UTR-5'UTR Intra-chr q15 q14.2 Tumor suppressor gene Seq+ 63263 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-RER1 FRS2 chr12 69880077 - RER1 chr1 2327223 + Exonic hg19 SARC TCGA-DX-A3LY-01B 2 3 5'UTR-5'UTR Inter-chr q15 p36.32 Seq+ 63264 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-RFWD2 FRS2 chr12 69864310 - RFWD2 chr1 175996824 - Exonic hg19 SARC TCGA-DX-A6BH-01A 105 56 5'UTR-CDS Inter-chr q15 q25.2 Tumor suppressor gene Seq+ 63265 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-RP11-362K2.2 FRS2 chr12 69864310 - RP11-362K2.2 chr12 58937907 + Exonic hg19 SARC TCGA-DX-A1L3-01A 232 146 Out-of-frame Intra-chr q15 63266 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-SBF2 FRS2 chr12 69925836 - SBF2 chr11 9817504 - Exonic hg19 SARC TCGA-DX-A3U5-01A 86 10 5'UTR-CDS Inter-chr q15 p15.4 Seq+ 63267 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-SBNO1 FRS2 chr12 69864310 - SBNO1 chr12 123834988 - Exonic hg19 SARC TCGA-DX-A3LS-01A 17 3 5'UTR-5'UTR Intra-chr q15 q24.31 Seq+ 63268 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-SCAF11 FRS2 chr12 69864310 - SCAF11 chr12 46357971 - Exonic hg19 BLCA TCGA-FD-A6TG-01A 2 1 5'UTR-5'UTR Intra-chr q15 q12 63269 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-TBC1D15 FRS2 chr12 69925836 - TBC1D15 chr12 72265850 + Exonic hg19 SARC TCGA-3R-A8YX-01A 80 23 5'UTR-5'UTR Intra-chr q15 q21.1 Seq+ 63270 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-TBC1D30 FRS2 chr12 69864310 - TBC1D30 chr12 65258448 + Exonic hg19 SKCM TCGA-GN-A26D-06A 30 4 5'UTR-CDS Intra-chr q15 q14.3 Seq+ 63271 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-TBC1D30 FRS2 chr12 69864310 - TBC1D30 chr12 65230270 + Exonic hg19 SARC TCGA-HB-A3YV-01A 111 33 5'UTR-CDS Intra-chr q15 q14.3 Seq+ 63272 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-TBK1 FRS2 chr12 69864310 - TBK1 chr12 64860681 + Exonic hg19 SARC TCGA-DX-A7EI-01A 148 74 5'UTR-CDS Intra-chr q15 q14.2 Other:IKK Seq+ 63273 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-THEMIS FRS2 chr12 69864310 - THEMIS chr6 128040968 - Exonic hg19 SARC TCGA-DX-A1L4-01A 99 43 5'UTR-CDS Inter-chr q15 Seq+ 63274 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-TMTC2 FRS2 chr12 69925836 - TMTC2 chr12 83379704 + Exonic hg19 SARC TCGA-FX-A2QS-01A 279 226 5'UTR-CDS Intra-chr q15 q21.31 Seq+ 63275 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-TSPAN8 FRS2 chr12 69864310 - TSPAN8 chr12 71551567 - Exonic hg19 BRCA TCGA-C8-A12M-01A 46 19 5'UTR-5'UTR Intra-chr q15 q21.1 Seq+ 63276 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRS2-ZFC3H1 FRS2 chr12 69931763 - ZFC3H1 chr12 72005667 - Exonic hg19 SARC TCGA-DX-A6BG-01A 195 55 5'UTR-CDS Intra-chr q15 q21.1 Seq+ 63277 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRYL-DTD1 FRYL chr4 48621291 - DTD1 chr20 18724744 + Exonic hg19 BRCA TCGA-OL-A5D7-01A 60 11 In-Frame Inter-chr p11 p11.23 Seq+ 63278 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRYL-FAM19A2 FRYL chr4 48636308 - FAM19A2 chr12 62261207 - Exonic hg19 STAD TCGA-CG-4476-01A 2 3 CDS-5'UTR Inter-chr p11 q14.1 63279 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRYL-LCORL FRYL chr4 48636308 - LCORL chr4 17847524 - Exonic hg19 LUSC TCGA-21-5786-01A 6 1 Out-of-frame Intra-chr p11 p15.31 Transcription factor 63280 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRYL-NKAIN3 FRYL chr4 48782095 - NKAIN3 chr8 63492098 + Exonic hg19 BLCA TCGA-E7-A85H-01A 2 1 5'UTR-CDS Inter-chr p11 q12.3 Seq+ 63281 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRYL-OCIAD2 FRYL chr4 48712536 - OCIAD2 chr4 48896070 - Exonic hg19 LUAD TCGA-64-5774-01A 57 62 5'UTR-CDS Intra-chr p11 p11 Seq+ 63282 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRYL-OCIAD2 FRYL chr4 48686690 - OCIAD2 chr4 48887582 - Exonic hg19 PRAD TCGA-EJ-A46G-01A 127 55 5'UTR-CDS Intra-chr p11 p11 Seq+ 63283 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRYL-OCIAD2 FRYL chr4 48782095 - OCIAD2 chr4 48887582 - Exonic hg19 CESC TCGA-HM-A6W2-06A 102 53 5'UTR-CDS Intra-chr p11 p11 Seq+ 63284 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRYL-OCIAD2 FRYL chr4 48782095 - OCIAD2 chr4 48906628 - Exonic hg19 PRAD TCGA-YJ-A8SW-01A 9 7 5'UTR-5'UTR Intra-chr p11 p11 Seq+ 63285 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRYL-UNC13B FRYL chr4 48712536 - UNC13B chr9 35366944 + Exonic hg19 SARC TCGA-HB-A2OT-01A 2 2 5'UTR-CDS Inter-chr p11 p13.3 63286 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FRYL-ZNF606 FRYL chr4 48712536 - ZNF606 chr19 58500089 - Exonic hg19 BRCA TCGA-BH-A0HU-01A 6 6 5'UTR-CDS Inter-chr p11 q13.43 Transcription factor Seq+ 63287 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FSCN1-EIF2AK1 FSCN1 chr7 5633399 - EIF2AK1 chr7 6066592 - Exonic hg19 BLCA TCGA-DK-A6B5-01A 135 302 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 63288 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FSCN1-FAR1 FSCN1 chr7 5646279 - FAR1 chr11 13744912 + Exonic hg19 HNSC TCGA-CN-5364-01A 2 2 Out-of-frame Inter-chr p22.1 p15.3 63289 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FSD1-SHD FSD1 chr19 4307980 - SHD chr19 4284778 + Exonic hg19 LUAD TCGA-L9-A8F4-01A 2 2 Out-of-frame Intra-chr p13.3 p13.3 63290 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FSD1L-ADAMTS13 FSD1L chr9 108210516 - ADAMTS13 chr9 136313720 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 31 9 Out-of-frame Intra-chr q31.2 Seq+ 63291 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FSD1L-OTUD7B FSD1L chr9 108210516 - OTUD7B chr1 149949511 - Exonic hg19 SARC TCGA-X6-A8C6-01A 4 3 CDS-5'UTR Inter-chr q31.2 q21.2 Seq+ 63292 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FSIP1-GPR176 FSIP1 chr15 39909936 - GPR176 chr15 40099459 - Exonic hg19 PCPG TCGA-QT-A5XN-01A 3 1 In-Frame Intra-chr q14 q15.1 Seq+ 63293 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FSTL1-CPOX FSTL1 chr3 120128379 - CPOX chr3 98304503 - Exonic hg19 SARC TCGA-PC-A5DM-01A 15 8 Out-of-frame Intra-chr q13.33 q11.2 Seq+ 63294 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FSTL4-SLC22A4 FSTL4 chr5 132902877 - SLC22A4 chr5 131679453 + Exonic hg19 BLCA TCGA-K4-A3WU-01B 2 3 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 63295 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FSTL4-SLIT3 FSTL4 chr5 132537625 - SLIT3 chr5 168114121 - Exonic hg19 BRCA TCGA-AR-A24V-01A 9 5 In-Frame Intra-chr q31.1 q35.1 Seq+ 63296 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FTL-FADS2 FTL chr19 49470135 - FADS2 chr11 61588853 + Exonic hg19 LUAD TCGA-73-4659-01A 2 1 Out-of-frame Inter-chr q13.33 q12.2 63297 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FTO-RBL2 FTO chr16 53738141 - RBL2 chr16 53472928 + Exonic hg19 LUAD TCGA-95-8039-01A 3 4 In-Frame Intra-chr q12.2 q12.2 Tumor suppressor gene Seq+ 63298 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FTO-ZNF536 FTO chr16 53738141 - ZNF536 chr19 31025754 + Exonic hg19 HNSC TCGA-CN-5364-01A 2 1 Out-of-frame Inter-chr q12.2 q12 Transcription factor 63299 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FTSJ3-SCN4A FTSJ3 chr17 61897439 - SCN4A chr17 62019353 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 7 10 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 63300 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FTSJD2-GPX6 FTSJD2 chr6 37403538 - GPX6 chr6 28478681 - Exonic hg19 KIRC TCGA-A3-3313-01A 11 8 Out-of-frame Intra-chr Seq+ 63301 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FTSJD2-PPARD FTSJD2 chr6 37403538 - PPARD chr6 35378764 + Exonic hg19 SARC TCGA-X6-A7WB-01A 8 1 CDS-5'UTR Intra-chr p21.31 Transcription factor 63302 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FTSJD2-RP4-761I2.2 FTSJD2 chr6 37441377 - RP4-761I2.2 chr6 11134636 + Exonic hg19 ACC TCGA-OR-A5LM-01A 18 10 Out-of-frame Intra-chr 63303 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FUBP1-DNAJB4 FUBP1 chr1 78444569 - DNAJB4 chr1 78478735 + Exonic hg19 PRAD TCGA-YL-A8SF-01A 5 24 Out-of-frame Intra-chr p31.1 Oncogene p31.1 Tumor suppressor gene Seq+ 63304 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FUBP1-LRRC7 FUBP1 chr1 78432378 - LRRC7 chr1 70144064 + Exonic hg19 BRCA TCGA-LL-A73Y-01A 8 5 CDS-5'UTR Intra-chr p31.1 Oncogene p31.1 Seq+ 63305 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FUBP1-SLC44A5 FUBP1 chr1 78444569 - SLC44A5 chr1 75766370 - Exonic hg19 BRCA TCGA-AR-A1AR-01A 3 6 Out-of-frame Intra-chr p31.1 Oncogene p31.1 Seq+ 63306 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FUK-ABCB5 FUK chr16 70512553 - ABCB5 chr7 20778606 + Exonic hg19 PRAD TCGA-KK-A7AY-01A 2 1 Out-of-frame Inter-chr q22.1 p21.1 Seq+ 63307 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FUK-PDPR FUK chr16 70497175 - PDPR chr16 70187294 + Exonic hg19 STAD TCGA-BR-8289-01A 2 6 Out-of-frame Intra-chr q22.1 q22.1 63308 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FUS-CHD1 FUS chr16 31202923 - CHD1 chr5 98219587 - Exonic hg19 BRCA TCGA-D8-A1XU-01A 2 6 Out-of-frame Inter-chr p11.2 Tumor suppressor gene q21.1 Tumor suppressor gene 63309 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FUS-DDIT3 FUS chr16 31199678 - DDIT3 chr12 57911536 - Exonic hg19 SARC TCGA-Z4-A9VC-01A 132 155 5'UTR-5'UTR Inter-chr p11.2 Tumor suppressor gene q13.3 Oncogene Transcription factor KB Pub 63310 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FUS-PRSS36 FUS chr16 31195717 - PRSS36 chr16 31161052 - Exonic hg19 HNSC TCGA-CV-6941-01A 4 4 In-Frame Intra-chr p11.2 Tumor suppressor gene p11.2 Seq+ 63311 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FUT10-C8orf42 FUT10 chr8 33310734 - C8orf42 chr8 444597 - Exonic hg19 PRAD TCGA-J4-A83I-01A 3 1 Out-of-frame Intra-chr p12 63312 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FUT10-GAB2 FUT10 chr8 33310734 - GAB2 chr11 77961446 - Exonic hg19 BRCA TCGA-AR-A250-01A 49 26 In-Frame Inter-chr p12 q14.1 Seq+ 63313 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FUT2-RASIP1 FUT2 chr19 49199336 - RASIP1 chr19 49228217 - Exonic hg19 UCS TCGA-N6-A4VE-01A 135 60 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 63314 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FUT8-AGBL4 FUT8 chr14 65879932 - AGBL4 chr1 49711536 - Exonic hg19 BRCA TCGA-C8-A26Z-01A 10 5 5'UTR-CDS Inter-chr q23.3 p33 Seq+ 63315 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FUT8-AL139022.1 FUT8 chr14 65922436 - AL139022.1 chr14 65494171 + Exonic hg19 OV TCGA-04-1517-01A 45 5 Out-of-frame Intra-chr q23.3 q23.3 63316 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FUT8-CCDC85C FUT8 chr14 65922436 - CCDC85C chr14 100002425 - Exonic hg19 OV TCGA-13-0916-01A 3 10 5'UTR-CDS Intra-chr q23.3 q32.2 Seq+ 63317 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FUT8-FNTB FUT8 chr14 65922436 - FNTB chr14 65470967 + Exonic hg19 BRCA TCGA-AO-A0J5-01A 19 5 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 63318 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FUT8-SIPA1L1 FUT8 chr14 66028484 - SIPA1L1 chr14 71996029 + Exonic hg19 LGG TCGA-IK-7675-01A 3 1 Out-of-frame Intra-chr q23.3 q24.2 63319 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FUT9-FBXO21 FUT9 chr6 96464088 - FBXO21 chr12 117627167 - Exonic hg19 STAD TCGA-VQ-A8PQ-01A 3 10 5'UTR-CDS Inter-chr q16.1 q24.22 Seq+ 63320 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FXR1-FGF10 FXR1 chr3 180630524 - FGF10 chr5 44389158 - Exonic hg19 LUSC TCGA-63-A5MV-01A 14 27 Out-of-frame Inter-chr q26.33 p12 Seq+ 63321 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FXR1-MCCC1 FXR1 chr3 180630524 - MCCC1 chr3 182790275 - Exonic hg19 LUSC TCGA-85-8580-01A 35 91 In-Frame Intra-chr q26.33 q27.1 Seq+ 63322 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FXR1-NAALADL2 FXR1 chr3 180653019 - NAALADL2 chr3 175165017 + Exonic hg19 CESC TCGA-C5-A1ML-01A 20 12 Out-of-frame Intra-chr q26.33 q26.31 Seq+ 63323 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FXR1-RIMS2 FXR1 chr3 180651174 - RIMS2 chr8 105080740 + Exonic hg19 BRCA TCGA-C8-A135-01A 2 10 Out-of-frame Inter-chr q26.33 q22.3 Seq+ 63324 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FXR2-CAB39L FXR2 chr17 7506227 - CAB39L chr13 49957077 - Exonic hg19 SARC TCGA-IE-A3OV-01A 34 7 CDS-5'UTR Inter-chr p13.1 q14.2 Seq+ 63325 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FXR2-TARBP1 FXR2 chr17 7508963 - TARBP1 chr1 234566047 - Exonic hg19 PRAD TCGA-KC-A7FD-01A 7 7 In-Frame Inter-chr p13.1 q42.2 Seq+ 63326 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FXR2-TP53 FXR2 chr17 7504727 - TP53 chr17 7577608 - Exonic hg19 TGCT TCGA-YU-AA61-01A 23 11 In-Frame Intra-chr p13.1 p13.1 Oncogene Tumor suppressor gene Transcription factor Seq+ 63327 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FXYD3-FAR1 FXYD3 chr19 35614557 - FAR1 chr11 13744912 + Exonic hg19 READ TCGA-F5-6861-01A 2 2 Out-of-frame Inter-chr q13.12 p15.3 63328 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FXYD3-TARM1 FXYD3 chr19 35610320 - TARM1 chr19 54579170 - Exonic hg19 BLCA TCGA-DK-A3X2-01A 120 21 In-Frame Intra-chr q13.12 Seq+ 63329 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FXYD3-ZNFX1 FXYD3 chr19 35615227 - ZNFX1 chr20 47863418 - Exonic hg19 BLCA TCGA-GD-A3OP-01A 2 13 Out-of-frame Inter-chr q13.12 q13.13 63330 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FXYD6-CD3G FXYD6 chr11 117747307 - CD3G chr11 118219742 + Exonic hg19 LUAD TCGA-44-7667-01A 3 1 5'UTR-CDS Intra-chr q23.3 q23.3 63331 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FXYD6-OSBP2 FXYD6 chr11 117747307 - OSBP2 chr22 31266416 + Exonic hg19 LGG TCGA-HT-7686-01A 9 24 5'UTR-CDS Inter-chr q23.3 q12.2 Seq+ 63332 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FXYD6-ZEB2 FXYD6 chr11 117707696 - ZEB2 chr2 145157837 - Exonic hg19 LGG TCGA-FG-6691-01A 2 4 3'UTR-CDS Inter-chr q23.3 q22.3 Transcription factor 63333 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FYCO1-ATG7 FYCO1 chr3 46021197 - ATG7 chr3 11421446 + Exonic hg19 LUAD TCGA-MP-A4TK-01A 34 9 In-Frame Intra-chr p21.31 p25.3 Seq+ 63334 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FYN-CDK19 FYN chr6 112194171 - CDK19 chr6 110953364 - Exonic hg19 SARC TCGA-3B-A9HL-01A 43 43 5'UTR-CDS Intra-chr q21 TK:Src q21 Seq+ 63335 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FYN-CDK19 FYN chr6 112101769 - CDK19 chr6 110935869 - Exonic hg19 UVM TCGA-VD-A8KJ-01A 6 17 5'UTR-CDS Intra-chr q21 TK:Src q21 Seq+ 63336 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FYN-LAMA4 FYN chr6 112015578 - LAMA4 chr6 112575493 - Exonic hg19 LUAD TCGA-MP-A4SY-01A 2 4 CDS-5'UTR Intra-chr q21 TK:Src q21 Seq+ 63337 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FYTTD1-ALDH1A3 FYTTD1 chr3 197505335 - ALDH1A3 chr15 101427777 + Exonic hg19 LGG TCGA-E1-5304-01A 32 18 In-Frame Inter-chr q29 q26.3 Seq+ 63338 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FYTTD1-DNAJC7 FYTTD1 chr3 197505335 - DNAJC7 chr17 40146962 - Exonic hg19 LUAD TCGA-93-8067-01A 65 31 In-Frame Inter-chr q29 q21.2 Seq+ 63339 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FYTTD1-IFIT1 FYTTD1 chr3 197476945 - IFIT1 chr10 91162038 + Exonic hg19 PRAD TCGA-G9-6364-01A 12 11 Out-of-frame Inter-chr q29 q23.31 Seq+ 63340 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FZD4-LAMTOR1 FZD4 chr11 86665843 - LAMTOR1 chr11 71810302 - Exonic hg19 BRCA TCGA-BH-A0W3-01A 24 10 In-Frame Intra-chr q14.2 q13.4 Seq+ 63341 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FZD4-RP11-115C10.1 FZD4 chr11 86665843 - RP11-115C10.1 chr11 126551678 + Exonic hg19 PRAD TCGA-CH-5766-01A 20 6 Out-of-frame Intra-chr q14.2 63342 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FZD6-BAALC FZD6 chr8 104312512 - BAALC chr8 104240217 + Exonic hg19 CESC TCGA-DS-A3LQ-01A 47 53 In-Frame Intra-chr q22.3 q22.3 Seq+ 63343 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FZD6-DPYS FZD6 chr8 104312512 - DPYS chr8 105405219 - Exonic hg19 BLCA TCGA-LC-A66R-01A 41 40 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 63344 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FZD6-SDCCAG8 FZD6 chr8 104312512 - SDCCAG8 chr1 243449574 + Exonic hg19 SKCM TCGA-YD-A9TA-06A 5 2 In-Frame Inter-chr q22.3 Seq+ 63345 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FZR1-C19orf28 FZR1 chr19 3506472 - C19orf28 chr19 3551192 - Exonic hg19 SKCM TCGA-GN-A8LN-01A 4 16 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene 63346 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FZR1-CELF5 FZR1 chr19 3506472 - CELF5 chr19 3293317 + Exonic hg19 PRAD TCGA-XJ-A9DX-01A 7 16 5'UTR-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 63347 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FZR1-CNN1 FZR1 chr19 3523056 - CNN1 chr19 11651891 + Exonic hg19 LUSC TCGA-39-5019-01A 14 1 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.2 Tumor suppressor gene Seq+ 63348 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FZR1-NCLN FZR1 chr19 3523056 - NCLN chr19 3201521 + Exonic hg19 LUAD TCGA-55-7903-01A 31 8 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 63349 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FZR1-NFIC FZR1 chr19 3506472 - NFIC chr19 3425104 + Exonic hg19 BRCA TCGA-AC-A5XU-01A 3 11 5'UTR-CDS Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Transcription factor Seq+ 63350 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FZR1-NFIC FZR1 chr19 3506472 - NFIC chr19 3381710 + Exonic hg19 CESC TCGA-DS-A1OD-01A 7 14 5'UTR-CDS Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Transcription factor Seq+ 63351 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FZR1-NFIC FZR1 chr19 3526384 - NFIC chr19 3462750 + Exonic hg19 BRCA TCGA-JL-A3YW-01A 21 7 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Transcription factor Seq+ 63352 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FZR1-TBC1D17 FZR1 chr19 3532648 - TBC1D17 chr19 50390733 + Exonic hg19 LGG TCGA-TM-A7CF-01A 12 9 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene q13.33 Seq+ 63353 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq FZR1-TBC1D17 FZR1 chr19 3532648 - TBC1D17 chr19 50390733 + Exonic hg19 LGG TCGA-TM-A7CF-02A 11 15 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene q13.33 Seq+ 63354 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq G3BP1-GLRA1 G3BP1 chr5 151151597 - GLRA1 chr5 151208628 - Exonic hg19 BRCA TCGA-AC-A2BM-01A 3 1 5'UTR-CDS Intra-chr q33.1 q33.1 63355 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq G3BP1-LMNB1 G3BP1 chr5 151151597 - LMNB1 chr5 126140468 + Exonic hg19 UCEC TCGA-AX-A3GI-01A 92 40 5'UTR-5'UTR Intra-chr q33.1 q23.2 Seq+ 63356 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq G3BP1-PCDH9 G3BP1 chr5 151166276 - PCDH9 chr13 66879160 - Exonic hg19 LUSC TCGA-85-A50M-01A 78 38 Out-of-frame Inter-chr q33.1 q21.32 Tumor suppressor gene Seq+ 63357 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq G3BP1-PDE4D G3BP1 chr5 151170623 - PDE4D chr5 59284544 - Exonic hg19 SKCM TCGA-D3-A51N-06A 40 25 In-Frame Intra-chr q33.1 q12.1 Seq+ 63358 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq G3BP1-SLC36A1 G3BP1 chr5 151151597 - SLC36A1 chr5 150856151 + Exonic hg19 LUSC TCGA-94-8491-01A 15 5 5'UTR-CDS Intra-chr q33.1 q33.1 Seq+ 63359 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq G3BP2-NAAA G3BP2 chr4 76598392 - NAAA chr4 76841128 - Exonic hg19 LUAD TCGA-44-7660-01A 7 5 5'UTR-CDS Intra-chr q21.1 q21.1 Seq+ 63360 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq G3BP2-PTPN1 G3BP2 chr4 76649460 - PTPN1 chr20 49177900 + Exonic hg19 BRCA TCGA-3C-AAAU-01A 4 6 5'UTR-CDS Inter-chr q21.1 q13.13 Tumor suppressor gene Seq+ 63361 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq G6PD-F8 G6PD chrX 153774251 - F8 chrX 154091502 - Exonic hg19 BRCA TCGA-BH-A0B5-01A 13 19 In-Frame Intra-chr q28 Oncogene q28 Seq+ 63362 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq G6PD-STAT6 G6PD chrX 153759606 - STAT6 chr12 57496773 - Exonic hg19 UCEC TCGA-D1-A3JP-01A 2 28 3'UTR-3'UTR Inter-chr q28 Oncogene q13.3 Transcription factor 63363 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAB2-CHKA GAB2 chr11 78075062 - CHKA chr11 67821514 - Exonic hg19 BRCA TCGA-3C-AAAU-01A 77 56 5'UTR-CDS Intra-chr q14.1 q13.2 Seq+ 63364 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAB2-FGF7 GAB2 chr11 77961203 - FGF7 chr15 49716229 + Exonic hg19 SKCM TCGA-ER-A19T-01A 124 100 CDS-5'UTR Inter-chr q14.1 q21.2 Seq+ 63365 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAB2-FGF7 GAB2 chr11 77961203 - FGF7 chr15 49775348 + Exonic hg19 SKCM TCGA-ER-A19T-06A 27 36 Out-of-frame Inter-chr q14.1 q21.2 Seq+ 63366 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAB2-MYO7A GAB2 chr11 78128692 - MYO7A chr11 76866953 + Exonic hg19 BRCA TCGA-A1-A0SM-01A 2 4 In-Frame Intra-chr q14.1 q13.5 63367 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAB2-NUDC GAB2 chr11 78128692 - NUDC chr1 27250580 + Exonic hg19 SKCM TCGA-EB-A5SH-06A 127 140 In-Frame Inter-chr q14.1 p36.11 Seq+ 63368 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAB2-ODZ4 GAB2 chr11 78128692 - ODZ4 chr11 78781054 - Exonic hg19 BRCA TCGA-BH-A0HY-01A 31 47 CDS-5'UTR Intra-chr q14.1 63369 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAB2-PLXDC1 GAB2 chr11 78128692 - PLXDC1 chr17 37296085 - Exonic hg19 BRCA TCGA-A1-A0SM-01A 2 1 Out-of-frame Inter-chr q14.1 q12 63370 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAB2-PTPRT GAB2 chr11 78128692 - PTPRT chr20 40828028 - Exonic hg19 SKCM TCGA-YG-AA3P-06A 7 6 Out-of-frame Inter-chr q14.1 q13.11 Oncogene Tumor suppressor gene Seq+ 63371 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAB2-RP11-111M22.2 GAB2 chr11 78128692 - RP11-111M22.2 chr11 76114704 + Exonic hg19 SKCM TCGA-EB-A6L9-06A 8 12 Out-of-frame Intra-chr q14.1 63372 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAB2-THRSP GAB2 chr11 77991647 - THRSP chr11 77778705 + Exonic hg19 BRCA TCGA-A2-A0CL-01A 6 2 CDS-3'UTR Intra-chr q14.1 q14.1 Seq+ 63373 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAB2-TRIP12 GAB2 chr11 77926343 - TRIP12 chr2 230662547 - Exonic hg19 SKCM TCGA-ER-A19T-06A 2 3 3'UTR-CDS Inter-chr q14.1 q36.3 63374 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GABBR2-ANKS6 GABBR2 chr9 101304155 - ANKS6 chr9 101498905 - Exonic hg19 LIHC TCGA-DD-A1EB-01A 8 1 In-Frame Intra-chr q22.33 q22.33 63375 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GABPA-JAM2 GABPA chr21 27113986 - JAM2 chr21 27078291 + Exonic hg19 UCEC TCGA-AJ-A3QS-01A 17 27 Out-of-frame Intra-chr q21.3 Transcription factor q21.3 Seq+ 63376 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GABPB1-C15orf52 GABPB1 chr15 50647182 - C15orf52 chr15 40630094 - Exonic hg19 SKCM TCGA-EB-A44Q-06A 13 4 5'UTR-CDS Intra-chr q21.2 q15.1 Seq+ 63377 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GABPB1-CSNK1G3 GABPB1 chr15 50647182 - CSNK1G3 chr5 122881111 + Exonic hg19 PRAD TCGA-G9-6348-01A 4 1 5'UTR-5'UTR Inter-chr q21.2 q23.2 63378 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GABPB1-GALK2 GABPB1 chr15 50647182 - GALK2 chr15 49611801 + Exonic hg19 BRCA TCGA-C8-A12T-01A 31 14 5'UTR-CDS Intra-chr q21.2 q21.1 Seq+ 63379 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GABPB1-SPATA5L1 GABPB1 chr15 50647182 - SPATA5L1 chr15 45697518 + Exonic hg19 PRAD TCGA-CH-5761-01A 13 2 5'UTR-5'UTR Intra-chr q21.2 q21.1 63380 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GABPB1-TRPM7 GABPB1 chr15 50638569 - TRPM7 chr15 50875356 - Exonic hg19 BLCA TCGA-DK-AA6W-01A 36 16 5'UTR-CDS Intra-chr q21.2 q21.2 63381 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GABPB2-MLLT11 GABPB2 chr1 151043410 - MLLT11 chr1 151039695 + Exonic hg19 OV TCGA-29-1697-01A 2 4 5'UTR-5'UTR Intra-chr q21.3 q21.3 Seq+ 63382 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GABRA3-DIAPH2 GABRA3 chrX 151376473 - DIAPH2 chrX 96684649 + Exonic hg19 KIRC TCGA-CJ-5681-01A 39 3 In-Frame Intra-chr q28 q21.33 Seq+ 63383 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GABRA3-SARNP GABRA3 chrX 151393235 - SARNP chr12 56146624 - Exonic hg19 SKCM TCGA-GN-A26D-06A 36 28 CDS-3'UTR Inter-chr q28 q13.2 Seq+ 63384 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GABRB3-TJP1 GABRB3 chr15 27017549 - TJP1 chr15 30092905 - Exonic hg19 PRAD TCGA-ZG-A9KY-01A 4 4 In-Frame Intra-chr q12 Seq+ 63385 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GABRG3-OCA2 GABRG3 chr15 27271968 - OCA2 chr15 28000618 - Exonic hg19 LUSC TCGA-22-5489-01A 2 1 Out-of-frame Intra-chr q12 q13.1 Seq+ 63386 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GABRG3-OCA2 GABRG3 chr15 27271968 - OCA2 chr15 28211968 - Exonic hg19 BRCA TCGA-E9-A22G-01A 3 4 In-Frame Intra-chr q12 q13.1 Seq+ 63387 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAK-LUC7L3 GAK chr4 843066 - LUC7L3 chr17 48834056 + Exonic hg19 BLCA TCGA-CU-A5W6-01A 10 17 Out-of-frame Inter-chr p16.3 Other:NAK q21.33 Seq+ 63388 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAK-MAGI1 GAK chr4 905461 - MAGI1 chr3 65607763 - Exonic hg19 BRCA TCGA-A8-A07R-01A 8 2 In-Frame Inter-chr p16.3 Other:NAK Oncogene Seq+ 63389 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAK-MEX3D GAK chr4 875695 - MEX3D chr19 1556922 - Exonic hg19 PRAD TCGA-YL-A9WL-01A 23 21 Out-of-frame Inter-chr p16.3 Other:NAK p13.3 Seq+ 63390 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAK-SPON2 GAK chr4 853394 - SPON2 chr4 1173329 - Exonic hg19 BLCA TCGA-FD-A6TE-01A 10 6 CDS-5'UTR Intra-chr p16.3 Other:NAK p16.3 Seq+ 63391 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALE-PITHD1 GALE chr1 24125856 - PITHD1 chr1 24112165 + Exonic hg19 STAD TCGA-BR-8289-01A 57 91 5'UTR-CDS Intra-chr p36.11 p36.11 Seq+ 63392 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALK2-C15orf43 GALK2 chr15 49584734 - C15orf43 chr15 45270687 + Exonic hg19 HNSC TCGA-CQ-6228-01A 5 12 In-Frame Intra-chr q21.1 Seq+ 63393 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNT1-TAF4B GALNT1 chr18 33234765 - TAF4B chr18 23937654 + Exonic hg19 LGG TCGA-TM-A84I-01A 20 39 Out-of-frame Intra-chr q12.2 q11.2 Seq+ 63394 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNT10-C5orf4 GALNT10 chr5 153570585 - C5orf4 chr5 154217738 - Exonic hg19 BRCA TCGA-A7-A4SD-01A 2 1 CDS-5'UTR Intra-chr q33.2 Seq+ 63395 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNT10-IQCA1 GALNT10 chr5 153677639 - IQCA1 chr2 237289279 - Exonic hg19 BRCA TCGA-AC-A6IW-01A 2 5 Out-of-frame Inter-chr q33.2 q37.3 Seq+ 63396 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNT11-CNTNAP2 GALNT11 chr7 151722969 - CNTNAP2 chr7 147259230 + Exonic hg19 CESC TCGA-ZJ-AAXB-01A 4 1 5'UTR-CDS Intra-chr q36.1 Tumor suppressor gene Seq+ 63397 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNT11-DPP6 GALNT11 chr7 151722969 - DPP6 chr7 154143299 + Exonic hg19 LUAD TCGA-78-7143-01A 2 1 5'UTR-CDS Intra-chr q36.1 63398 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNT11-EZH2 GALNT11 chr7 151722969 - EZH2 chr7 148529842 - Exonic hg19 LUAD TCGA-44-2659-01A 31 15 5'UTR-CDS Intra-chr q36.1 q36.1 Oncogene Tumor suppressor gene Seq+ 63399 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNT11-FKBP3 GALNT11 chr7 151724803 - FKBP3 chr14 45600003 - Exonic hg19 BRCA TCGA-E2-A15A-01A 7 4 5'UTR-CDS Inter-chr q36.1 q21.2 Seq+ 63400 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNT11-FKBP3 GALNT11 chr7 151722969 - FKBP3 chr14 45600003 - Exonic hg19 BRCA TCGA-E2-A15A-06A 6 5 5'UTR-CDS Inter-chr q36.1 q21.2 Seq+ 63401 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNT11-LMBR1 GALNT11 chr7 151722969 - LMBR1 chr7 156629579 - Exonic hg19 SKCM TCGA-BF-A5EP-01A 3 3 5'UTR-CDS Intra-chr q36.1 q36.3 Seq+ 63402 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNT11-PRKAG2 GALNT11 chr7 151810483 - PRKAG2 chr7 151262971 - Exonic hg19 BRCA TCGA-AO-A12E-01A 15 16 In-Frame Intra-chr q36.1 q36.1 Seq+ 63403 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNT11-PTPRN2 GALNT11 chr7 151722969 - PTPRN2 chr7 158282477 - Exonic hg19 SARC TCGA-X6-A8C4-01A 5 5 5'UTR-CDS Intra-chr q36.1 q36.3 Seq+ 63404 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNT12-ROR2 GALNT12 chr9 101570351 - ROR2 chr9 94325611 - Exonic hg19 SARC TCGA-DX-A1KZ-01A 7 3 Out-of-frame Intra-chr q22.33 q22.31 TK:Ror Tumor suppressor gene Seq+ 63405 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNT13-SMYD1 GALNT13 chr2 154997018 - SMYD1 chr2 88383835 + Exonic hg19 SARC TCGA-K1-A6RV-01A 35 20 In-Frame Intra-chr q23.3 p11.2 Seq+ 63406 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNT14-FAM98A GALNT14 chr2 31360824 - FAM98A chr2 33820704 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 6 5 Out-of-frame Intra-chr p23.1 p22.3 Seq+ 63407 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNT14-NRXN1 GALNT14 chr2 31360824 - NRXN1 chr2 50170929 - Exonic hg19 PRAD TCGA-XK-AAJA-01A 7 6 In-Frame Intra-chr p23.1 p16.3 Seq+ 63408 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNT2-KIF26B GALNT2 chr1 230339036 - KIF26B chr1 245847535 + Exonic hg19 BRCA TCGA-A8-A079-01A 20 8 In-Frame Intra-chr q42.13 Seq+ 63409 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNT2-RGS7 GALNT2 chr1 230203153 - RGS7 chr1 241146429 - Exonic hg19 SKCM TCGA-D3-A51E-06A 4 2 Out-of-frame Intra-chr q42.13 q43 Seq+ 63410 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNT3-TTC21B GALNT3 chr2 166650525 - TTC21B chr2 166758420 - Exonic hg19 PRAD TCGA-V1-A9Z8-01A 3 6 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 63411 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNT7-CEP44 GALNT7 chr4 174225269 - CEP44 chr4 175252633 + Exonic hg19 PRAD TCGA-VP-AA1N-01A 210 136 In-Frame Intra-chr q34.1 q34.1 Seq+ 63412 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNT7-GAB1 GALNT7 chr4 174090112 - GAB1 chr4 144336630 + Exonic hg19 PRAD TCGA-VN-A943-01A 6 13 In-Frame Intra-chr q34.1 q31.21 Seq+ 63413 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNT7-SPCS3 GALNT7 chr4 174169591 - SPCS3 chr4 177243321 + Exonic hg19 PRAD TCGA-EJ-7123-01A 26 12 In-Frame Intra-chr q34.1 q34.2 Seq+ 63414 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNT7-TTC29 GALNT7 chr4 174216677 - TTC29 chr4 147724837 - Exonic hg19 PRAD TCGA-KK-A7AV-01A 4 3 In-Frame Intra-chr q34.1 q31.22 63415 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNTL1-DOCK1 GALNTL1 chr14 69727184 - DOCK1 chr10 129201319 + Exonic hg19 BRCA TCGA-PE-A5DC-01A 8 1 In-Frame Inter-chr q26.2 63416 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNTL1-RAD51B GALNTL1 chr14 69791507 - RAD51B chr14 69196525 + Exonic hg19 UCEC TCGA-AJ-A3NH-01A 7 7 Out-of-frame Intra-chr q24.1 63417 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNTL1-RAD51B GALNTL1 chr14 69727184 - RAD51B chr14 68758601 + Exonic hg19 LIHC TCGA-UB-A7MA-01A 19 22 In-Frame Intra-chr q24.1 63418 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNTL4-BECN1 GALNTL4 chr11 11454168 - BECN1 chr17 40975897 - Exonic hg19 BLCA TCGA-GV-A40E-01A 3 2 CDS-5'UTR Inter-chr q21.31 Tumor suppressor gene 63419 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNTL4-DENND5B GALNTL4 chr11 11642906 - DENND5B chr12 31579358 - Exonic hg19 BRCA TCGA-AR-A24Q-01A 2 1 Out-of-frame Inter-chr p11.21 63420 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNTL4-E2F8 GALNTL4 chr11 11642906 - E2F8 chr11 19261777 - Exonic hg19 COAD TCGA-G4-6314-01A 3 2 CDS-5'UTR Intra-chr p15.1 Transcription factor 63421 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNTL4-IER3IP1 GALNTL4 chr11 11454168 - IER3IP1 chr18 44683908 - Exonic hg19 BLCA TCGA-DK-A3IN-01A 20 22 In-Frame Inter-chr q21.1 63422 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNTL4-PPP1R1B GALNTL4 chr11 11642906 - PPP1R1B chr17 37785423 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 5 6 Out-of-frame Inter-chr q12 Tumor suppressor gene 63423 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNTL4-PRDM2 GALNTL4 chr11 11642906 - PRDM2 chr1 14142922 + Exonic hg19 SKCM TCGA-EB-A4OY-01A 55 42 In-Frame Inter-chr p36.21 Tumor suppressor gene Transcription factor 63424 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALNTL4-ST5 GALNTL4 chr11 11642906 - ST5 chr11 8772272 - Exonic hg19 LUSC TCGA-34-A5IX-01A 10 15 CDS-5'UTR Intra-chr p15.4 Tumor suppressor gene Seq+ 63425 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GALT-WDR72 GALT chr9 34649561 - WDR72 chr15 53889471 - Exonic hg19 SARC TCGA-DX-A1KY-01A 14 6 In-Frame Inter-chr p13.3 q21.3 Seq+ 63426 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAN-GRM7 GAN chr16 81348885 - GRM7 chr3 7188139 + Exonic hg19 LUSC TCGA-18-3412-01A 4 1 Out-of-frame Inter-chr q23.2 p26.1 Seq+ 63427 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GANAB-C11orf48 GANAB chr11 62407099 - C11orf48 chr11 62430805 - Exonic hg19 ACC TCGA-OR-A5LD-01A 143 78 Out-of-frame Intra-chr q12.3 Tumor suppressor gene Seq+ 63428 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GANAB-RP11-831H9.11 GANAB chr11 62407099 - RP11-831H9.11 chr11 62430805 - Exonic hg19 ACC TCGA-OR-A5LD-01A 82 20 Out-of-frame Intra-chr q12.3 Tumor suppressor gene 63429 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GANAB-ZNF76 GANAB chr11 62400037 - ZNF76 chr6 35248833 + Exonic hg19 BRCA TCGA-A7-A13D-01B 2 7 CDS-5'UTR Inter-chr q12.3 Tumor suppressor gene p21.31 Transcription factor Seq+ 63430 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GANC-RORA GANC chr15 42618622 - RORA chr15 60789818 - Exonic hg19 BLCA TCGA-4Z-AA84-01A 4 3 Out-of-frame Intra-chr q15.1 q22.2 Transcription factor Seq+ 63431 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAPDH-APOA2 GAPDH chr12 6647481 - APOA2 chr1 161193418 - Exonic hg19 LIHC TCGA-CC-A7IL-01A 2 3 3'UTR-5'UTR Inter-chr p13.31 q23.3 63432 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAPDH-APOA2 GAPDH chr12 6647481 - APOA2 chr1 161193418 - Exonic hg19 LIHC TCGA-DD-AACJ-01A 2 2 3'UTR-5'UTR Inter-chr p13.31 q23.3 63433 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAPDH-HSPB1 GAPDH chr12 6647481 - HSPB1 chr7 75931861 + Exonic hg19 SKCM TCGA-EE-A3AG-06A 2 1 Out-of-frame Inter-chr p13.31 q11.23 63434 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GARNL3-RALGPS1 GARNL3 chr9 130053521 - RALGPS1 chr9 129936994 + Exonic hg19 UCS TCGA-NG-A4VU-01A 5 1 Out-of-frame Intra-chr q33.3 q33.3 Seq+ 63435 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GARS-HOXA13 GARS chr7 30651861 - HOXA13 chr7 27238061 - Exonic hg19 SKCM TCGA-3N-A9WB-06A 26 8 Out-of-frame Intra-chr p14.3 p15.2 Transcription factor Seq+ 63436 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GART-PCP4 GART chr21 34883559 - PCP4 chr21 41300909 + Exonic hg19 LUSC TCGA-37-4130-01A 4 5 In-Frame Intra-chr q22.2 Seq+ 63437 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAS2-SOX6 GAS2 chr11 22696560 - SOX6 chr11 16362798 - Exonic hg19 KICH TCGA-KL-8339-01A 7 3 Out-of-frame Intra-chr p14.3 p15.2 Transcription factor Seq+ 63438 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAS2L1-CTD-2547L24.3 GAS2L1 chr22 29704728 - CTD-2547L24.3 chr14 91717109 + Exonic hg19 LUAD TCGA-NJ-A4YP-01A 2 1 Out-of-frame Inter-chr q12.2 63439 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAS2L1-SMTN GAS2L1 chr22 29704728 - SMTN chr22 31500302 + Exonic hg19 BLCA TCGA-GC-A4ZW-01A 98 58 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 63440 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAS2L3-KRT2 GAS2L3 chr12 100995531 - KRT2 chr12 53044337 - Exonic hg19 SARC TCGA-DX-A2J4-01A 9 1 In-Frame Intra-chr q23.1 q13.13 63441 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAS2L3-MED13L GAS2L3 chr12 100995531 - MED13L chr12 116404048 - Exonic hg19 BLCA TCGA-FD-A6TB-01A 22 11 In-Frame Intra-chr q23.1 q24.21 Seq+ 63442 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAS2L3-OS9 GAS2L3 chr12 100995531 - OS9 chr12 58109543 + Exonic hg19 SARC TCGA-DX-A1L4-01A 114 70 In-Frame Intra-chr q23.1 q13.3 Seq+ 63443 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAS2L3-SND1 GAS2L3 chr12 100995531 - SND1 chr7 127334882 + Exonic hg19 COAD TCGA-G4-6626-01A 20 18 In-Frame Inter-chr q23.1 q32.1 Seq+ 63444 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAS6-GPC5 GAS6 chr13 114566548 - GPC5 chr13 93518535 + Exonic hg19 LUAD TCGA-O1-A52J-01A 5 2 Out-of-frame Intra-chr q34 Oncogene q31.3 Tumor suppressor gene Seq+ 63445 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAS7-ATP8B4 GAS7 chr17 10101525 - ATP8B4 chr15 50273491 - Exonic hg19 SARC TCGA-SG-A849-01A 3 5 Out-of-frame Inter-chr p13.1 q21.2 Seq+ 63446 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAS7-MYH1 GAS7 chr17 10101525 - MYH1 chr17 10415863 - Exonic hg19 LUAD TCGA-97-8172-01A 16 5 In-Frame Intra-chr p13.1 p13.1 Seq+ 63447 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAS7-MYH1 GAS7 chr17 10101525 - MYH1 chr17 10415863 - Exonic hg19 STAD TCGA-BR-4366-01A 2 2 In-Frame Intra-chr p13.1 p13.1 Seq+ 63448 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAS7-MYH1 GAS7 chr17 10101525 - MYH1 chr17 10415863 - Exonic hg19 STAD TCGA-MX-A666-01A 3 9 In-Frame Intra-chr p13.1 p13.1 Seq+ 63449 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAS8-SPIRE2 GAS8 chr16 90099332 - SPIRE2 chr16 89916712 + Exonic hg19 BRCA TCGA-A8-A08P-01A 7 10 In-Frame Intra-chr q24.3 q24.3 63450 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GAS8-WDR59 GAS8 chr16 90089132 - WDR59 chr16 74976724 - Exonic hg19 THCA TCGA-BJ-A0ZB-01A 10 19 Out-of-frame Intra-chr q24.3 q23.1 Seq+ 63451 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GATA3-TAF3 GATA3 chr10 8111561 - TAF3 chr10 8055694 + Exonic hg19 BRCA TCGA-AR-A1AP-01A 357 243 In-Frame Intra-chr p14 Oncogene Transcription factor p14 Seq+ 63452 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GATA4-SFTPD GATA4 chr8 11561813 - SFTPD chr10 81706418 - Exonic hg19 STAD TCGA-VQ-A91N-01A 2 2 5'UTR-5'UTR Inter-chr p23.1 Tumor suppressor gene Transcription factor q22.3 63453 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GATA6-DPF1 GATA6 chr18 19752240 - DPF1 chr19 38713348 - Exonic hg19 STAD TCGA-HU-8243-01A 7 15 Out-of-frame Inter-chr q11.2 Transcription factor q13.2 Transcription factor Seq+ 63454 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GATAD2A-C19orf50 GATAD2A chr19 19516828 - C19orf50 chr19 18672846 + Exonic hg19 SARC TCGA-DX-A8BL-01A 3 11 Out-of-frame Intra-chr p13.11 Transcription factor 63455 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GATAD2A-CHST1 GATAD2A chr19 19576423 - CHST1 chr11 45674156 - Exonic hg19 ESCA TCGA-XP-A8T8-01A 7 14 CDS-5'UTR Inter-chr p13.11 Transcription factor p11.2 Seq+ 63456 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GATAD2A-GIPC1 GATAD2A chr19 19576423 - GIPC1 chr19 14603724 - Exonic hg19 DLBC TCGA-RQ-A6JB-01A 9 6 CDS-5'UTR Intra-chr p13.11 Transcription factor p13.12 Seq+ 63457 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GATAD2A-PRKACA GATAD2A chr19 19547028 - PRKACA chr19 14204604 - Exonic hg19 BRCA TCGA-AC-A5XU-01A 14 19 5'UTR-CDS Intra-chr p13.11 Transcription factor p13.12 Seq+ 63458 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GATAD2A-ZNF350 GATAD2A chr19 19496947 - ZNF350 chr19 52477784 - Exonic hg19 ESCA TCGA-L5-A891-01A 9 40 5'UTR-5'UTR Intra-chr p13.11 Transcription factor q13.41 Transcription factor Seq+ 63459 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GATAD2B-ACSS3 GATAD2B chr1 153895209 - ACSS3 chr12 81593120 + Exonic hg19 SARC TCGA-DX-A7EI-01A 4 3 5'UTR-CDS Inter-chr Transcription factor q21.31 63460 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GATAD2B-ASH1L GATAD2B chr1 153895209 - ASH1L chr1 155349907 - Exonic hg19 LUAD TCGA-97-A4M3-01A 4 1 5'UTR-CDS Intra-chr Transcription factor q22 Transcription factor Seq+ 63461 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GATAD2B-CRTC2 GATAD2B chr1 153895209 - CRTC2 chr1 153921860 - Exonic hg19 OV TCGA-13-1405-01A 18 13 5'UTR-CDS Intra-chr Transcription factor q21.3 Seq+ 63462 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GATAD2B-ERI3 GATAD2B chr1 153895209 - ERI3 chr1 44785416 - Exonic hg19 BLCA TCGA-BT-A20T-01A 2 3 5'UTR-CDS Intra-chr Transcription factor p34.1 Seq+ 63463 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GATAD2B-FAHD2B GATAD2B chr1 153895209 - FAHD2B chr2 97757449 - Exonic hg19 UCEC TCGA-B5-A1MS-01B 6 4 5'UTR-5'UTR Inter-chr Transcription factor q11.2 63464 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GATAD2B-GRM8 GATAD2B chr1 153895209 - GRM8 chr7 126086426 - Exonic hg19 SARC TCGA-DX-A1L2-01A 225 225 5'UTR-CDS Inter-chr Transcription factor q31.33 Oncogene Seq+ 63465 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GATAD2B-KCNN3 GATAD2B chr1 153895209 - KCNN3 chr1 154744869 - Exonic hg19 PRAD TCGA-2A-A8W3-01A 40 17 5'UTR-CDS Intra-chr Transcription factor q21.3 Seq+ 63466 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GATAD2B-KCNN3 GATAD2B chr1 153895209 - KCNN3 chr1 154744869 - Exonic hg19 PRAD TCGA-HC-8265-01A 2 5 5'UTR-CDS Intra-chr Transcription factor q21.3 Seq+ 63467 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GATAD2B-LAMC3 GATAD2B chr1 153895209 - LAMC3 chr9 133936422 + Exonic hg19 UCEC TCGA-B5-A1MS-01B 15 10 5'UTR-CDS Inter-chr Transcription factor q34.12 Seq+ 63468 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GATAD2B-LELP1 GATAD2B chr1 153895209 - LELP1 chr1 153177163 + Exonic hg19 PRAD TCGA-YL-A8SR-01B 11 4 5'UTR-5'UTR Intra-chr Transcription factor q21.3 Seq+ 63469 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GATAD2B-NUP210L GATAD2B chr1 153895209 - NUP210L chr1 153965565 - Exonic hg19 OV TCGA-30-1718-01A 3 18 5'UTR-CDS Intra-chr Transcription factor q21.3 Seq+ 63470 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GATAD2B-NUP210L GATAD2B chr1 153895209 - NUP210L chr1 153982597 - Exonic hg19 LUAD TCGA-44-7660-01A 21 24 5'UTR-CDS Intra-chr Transcription factor q21.3 Seq+ 63471 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GATAD2B-NUP210L GATAD2B chr1 153895209 - NUP210L chr1 153967656 - Exonic hg19 BRCA TCGA-B6-A0I1-01A 4 2 5'UTR-CDS Intra-chr Transcription factor q21.3 Seq+ 63472 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GATAD2B-NUP210L GATAD2B chr1 153895209 - NUP210L chr1 154076686 - Exonic hg19 UCS TCGA-N5-A59F-01A 5 4 5'UTR-CDS Intra-chr Transcription factor q21.3 Seq+ 63473 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GATAD2B-RP11-574F21.3 GATAD2B chr1 153895209 - RP11-574F21.3 chr1 160210160 - Exonic hg19 LUAD TCGA-62-A46U-01A 113 40 Out-of-frame Intra-chr Transcription factor 63474 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GATAD2B-SLC9A11 GATAD2B chr1 153788749 - SLC9A11 chr1 173478838 - Exonic hg19 BRCA TCGA-E2-A10A-01A 2 1 Out-of-frame Intra-chr Transcription factor 63475 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GATAD2B-TNFSF18 GATAD2B chr1 153895209 - TNFSF18 chr1 173013109 - Exonic hg19 GBM TCGA-19-2619-01A 3 5 5'UTR-CDS Intra-chr Transcription factor q25.1 Seq+ 63476 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GATS-TSC22D4 GATS chr7 99869461 - TSC22D4 chr7 100065223 - Exonic hg19 LUSC TCGA-68-A59I-01A 14 7 In-Frame Intra-chr q22.1 q22.1 Seq+ 63477 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GBA-SCAMP3 GBA chr1 155214297 - SCAMP3 chr1 155228745 - Exonic hg19 BRCA TCGA-B6-A0RU-01A 51 20 5'UTR-CDS Intra-chr Seq+ 63478 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GBA2-ATP6V1C1 GBA2 chr9 35748343 - ATP6V1C1 chr8 104061098 + Exonic hg19 BRCA TCGA-C8-A12U-01A 5 2 In-Frame Inter-chr p13.3 q22.3 Seq+ 63479 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GBAS-PHYHIPL GBAS chr7 56032394 - PHYHIPL chr10 60998348 + Exonic hg19 PRAD TCGA-KK-A7AU-01A 4 4 Out-of-frame Inter-chr q21.1 Seq+ 63480 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GBAS-PSPH GBAS chr7 56032394 - PSPH chr7 56082864 - Exonic hg19 LUSC TCGA-21-A5DI-01A 203 63 Out-of-frame Intra-chr p11.2 Seq+ 63481 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GBE1-ZNF385D GBE1 chr3 81627076 - ZNF385D chr3 21478695 - Exonic hg19 LUSC TCGA-43-2578-01A 50 38 In-Frame Intra-chr p12.2 p24.3 Transcription factor Seq+ 63482 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GBE1-ZNF569 GBE1 chr3 81754595 - ZNF569 chr19 37935866 - Exonic hg19 UCS TCGA-N5-A4RO-01A 4 1 CDS-5'UTR Inter-chr p12.2 q13.12 Transcription factor 63483 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GBF1-CTDSP2 GBF1 chr10 104005538 - CTDSP2 chr12 58218102 - Exonic hg19 SARC TCGA-DX-A23T-01A 77 104 5'UTR-CDS Inter-chr q24.32 q14.1 Seq+ 63484 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GBF1-NOLC1 GBF1 chr10 104130617 - NOLC1 chr10 103918950 + Exonic hg19 ACC TCGA-OR-A5LO-01A 7 3 Out-of-frame Intra-chr q24.32 q24.32 Seq+ 63485 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GBF1-NT5C2 GBF1 chr10 104019873 - NT5C2 chr10 104866463 - Exonic hg19 COAD TCGA-CA-5254-01A 21 16 In-Frame Intra-chr q24.32 q24.33 Seq+ 63486 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GBF1-SFTPD GBF1 chr10 104005538 - SFTPD chr10 81697984 - Exonic hg19 UCEC TCGA-5B-A90C-01A 7 8 5'UTR-CDS Intra-chr q24.32 q22.3 Seq+ 63487 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GBF1-TRPC6 GBF1 chr10 104005538 - TRPC6 chr11 101375529 - Exonic hg19 SARC TCGA-DX-A23T-01A 26 29 5'UTR-CDS Inter-chr q24.32 q22.1 Seq+ 63488 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GBF1-UBE2R2 GBF1 chr10 104103939 - UBE2R2 chr9 33886879 + Exonic hg19 BLCA TCGA-2F-A9KP-01A 10 5 Out-of-frame Inter-chr q24.32 p13.3 Seq+ 63489 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GC-DSP GC chr4 72607413 - DSP chr6 7575528 + Exonic hg19 LIHC TCGA-DD-A3A8-01A 2 2 3'UTR-CDS Inter-chr q13.3 p24.3 Tumor suppressor gene 63490 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GCFC1-ABI3BP GCFC1 chr21 34133370 - ABI3BP chr3 100508360 - Exonic hg19 BRCA TCGA-AO-A128-01A 10 2 Out-of-frame Inter-chr q12.2 63491 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GCFC1-ADAMTS1 GCFC1 chr21 34142125 - ADAMTS1 chr21 28215004 - Exonic hg19 BRCA TCGA-BH-A0EE-01A 2 2 In-Frame Intra-chr q21.3 63492 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GCFC1-TP53I3 GCFC1 chr21 34131391 - TP53I3 chr2 24300631 - Exonic hg19 BRCA TCGA-AR-A1AO-01A 2 2 In-Frame Inter-chr p23.3 63493 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GCN1L1-CCND2 GCN1L1 chr12 120600651 - CCND2 chr12 4398008 + Exonic hg19 LUSC TCGA-22-1017-01A 10 8 Out-of-frame Intra-chr p13.32 Oncogene Seq+ 63494 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GCN1L1-CD74 GCN1L1 chr12 120607973 - CD74 chr5 149792314 - Exonic hg19 DLBC TCGA-GS-A9TV-01A 2 2 CDS-5'UTR Inter-chr q33.1 63495 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GCN1L1-PLA2G1B GCN1L1 chr12 120628101 - PLA2G1B chr12 120763823 - Exonic hg19 LIHC TCGA-DD-A73G-01A 3 2 In-Frame Intra-chr q24.31 63496 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GCNT2-OSM GCNT2 chr6 10530069 - OSM chr22 30661133 - Exonic hg19 LUAD TCGA-55-6978-01A 3 1 In-Frame Inter-chr p24.3 q12.2 Seq+ 63497 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GCNT2-PDE4B GCNT2 chr6 10530069 - PDE4B chr1 66378928 + Exonic hg19 BRCA TCGA-EW-A6SD-01A 2 6 5'UTR-5'UTR Inter-chr p24.3 p31.3 63498 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GDA-FAM69B GDA chr9 74764598 - FAM69B chr9 139612029 + Exonic hg19 LIHC TCGA-G3-A7M7-01A 48 25 In-Frame Intra-chr q21.13 q34.3 Seq+ 63499 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GDA-SIAE GDA chr9 74867140 - SIAE chr11 124543777 - Exonic hg19 KIRC TCGA-A3-3313-01A 2 2 3'UTR-5'UTR Inter-chr q21.13 q24.2 63500 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GDAP2-ADORA3 GDAP2 chr1 118420631 - ADORA3 chr1 112043178 - Exonic hg19 BRCA TCGA-A2-A0YE-01A 2 2 Out-of-frame Intra-chr p12 p13.2 63501 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GDAP2-SLAIN1 GDAP2 chr1 118472071 - SLAIN1 chr13 78334963 + Exonic hg19 PRAD TCGA-M7-A71Y-01A 9 4 5'UTR-CDS Inter-chr p12 q22.3 Seq+ 63502 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GDAP2-SPAG17 GDAP2 chr1 118472071 - SPAG17 chr1 118539366 - Exonic hg19 BRCA TCGA-A8-A07L-01A 40 15 5'UTR-CDS Intra-chr p12 p12 Seq+ 63503 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GDE1-FLYWCH2 GDE1 chr16 19522161 - FLYWCH2 chr16 2945221 + Exonic hg19 STAD TCGA-BR-8289-01A 12 15 CDS-5'UTR Intra-chr p12.3 p13.3 Seq+ 63504 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GDE1-TIAL1 GDE1 chr16 19528336 - TIAL1 chr10 121347760 - Exonic hg19 PRAD TCGA-ZG-A9N3-01A 17 11 In-Frame Inter-chr p12.3 q26.11 Seq+ 63505 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GDF11-HOXC8 GDF11 chr12 56143667 - HOXC8 chr12 54404873 + Exonic hg19 LGG TCGA-DH-A7UV-01A 6 3 3'UTR-CDS Intra-chr q13.2 q13.13 Transcription factor Seq+ 63506 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GDI2-CPVL GDI2 chr10 5842561 - CPVL chr7 29160687 - Exonic hg19 LGG TCGA-DU-6401-01A 29 22 CDS-5'UTR Inter-chr p15.1 p14.3 Seq+ 63507 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GDI2-IL2RA GDI2 chr10 5815805 - IL2RA chr10 6054859 - Exonic hg19 STAD TCGA-BR-8373-01A 2 21 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 63508 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GDI2-ZNF526 GDI2 chr10 5855177 - ZNF526 chr19 42728367 + Exonic hg19 BLCA TCGA-FD-A3B3-01A 5 7 CDS-5'UTR Inter-chr p15.1 q13.2 Transcription factor Seq+ 63509 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GDNF-FYB GDNF chr5 37834826 - FYB chr5 39119736 - Exonic hg19 LUSC TCGA-98-A53B-01A 2 1 Out-of-frame Intra-chr p13.2 Oncogene p13.1 63510 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GDPD1-SMG8 GDPD1 chr17 57298112 - SMG8 chr17 57292166 + Exonic hg19 BRCA TCGA-A7-A56D-01A 7 9 Out-of-frame Intra-chr q22 q22 Seq+ 63511 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GDPD1-SMG8 GDPD1 chr17 57298112 - SMG8 chr17 57292166 + Exonic hg19 BLCA TCGA-GC-A3RD-01A 15 10 Out-of-frame Intra-chr q22 q22 Seq+ 63512 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GDPD5-SERPINH1 GDPD5 chr11 75188664 - SERPINH1 chr11 75277361 + Exonic hg19 SKCM TCGA-GN-A8LL-06A 45 35 CDS-5'UTR Intra-chr q13.5 q13.5 Seq+ 63513 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GET4-HEATR2 GET4 chr7 927156 - HEATR2 chr7 794226 + Exonic hg19 CESC TCGA-JW-A5VJ-01A 80 26 In-Frame Intra-chr p22.3 Seq+ 63514 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GFM1-MLF1 GFM1 chr3 158384175 - MLF1 chr3 158310223 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 109 169 In-Frame Intra-chr q25.32 q25.32 Seq+ 63515 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GFOD1-BCAS1 GFOD1 chr6 13486870 - BCAS1 chr20 52645511 - Exonic hg19 BRCA TCGA-EW-A1PF-01A 4 4 In-Frame Inter-chr p23 q13.2 Seq+ 63516 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GFOD1-CYP39A1 GFOD1 chr6 13486870 - CYP39A1 chr6 46610035 - Exonic hg19 BRCA TCGA-AO-A0JG-01A 3 3 Out-of-frame Intra-chr p23 p12.3 Seq+ 63517 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GFOD1-EYA4 GFOD1 chr6 13486870 - EYA4 chr6 133703530 + Exonic hg19 SARC TCGA-3B-A9HL-01A 3 1 Out-of-frame Intra-chr p23 q23.2 Tumor suppressor gene 63518 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GFOD1-EYS GFOD1 chr6 13486870 - EYS chr6 65532715 - Exonic hg19 SKCM TCGA-BF-AAP2-01A 4 2 In-Frame Intra-chr p23 q12 63519 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GFOD2-TRIO GFOD2 chr16 67753066 - TRIO chr5 14270934 + Exonic hg19 SKCM TCGA-GN-A264-06A 18 12 5'UTR-CDS Inter-chr q22.1 p15.2 Seq+ 63520 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GFPT1-NF1 GFPT1 chr2 69565030 - NF1 chr17 29664837 + Exonic hg19 STAD TCGA-CG-4477-01A 11 13 In-Frame Inter-chr p13.3 q11.2 Oncogene Tumor suppressor gene Seq+ 63521 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GFPT1-NFU1 GFPT1 chr2 69590677 - NFU1 chr2 69623422 - Exonic hg19 LUSC TCGA-37-3789-01A 7 3 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 63522 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GFPT1-NFU1 GFPT1 chr2 69614197 - NFU1 chr2 69646736 - Exonic hg19 KIRC TCGA-B0-5701-01A 33 21 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 63523 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GFPT1-NFU1 GFPT1 chr2 69614197 - NFU1 chr2 69650849 - Exonic hg19 HNSC TCGA-CR-7369-01A 5 1 In-Frame Intra-chr p13.3 p13.3 Seq+ 63524 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GFPT1-NFU1 GFPT1 chr2 69614197 - NFU1 chr2 69633214 - Exonic hg19 SKCM TCGA-GN-A266-06A 10 12 In-Frame Intra-chr p13.3 p13.3 Seq+ 63525 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GFPT2-PPFIA2 GFPT2 chr5 179757700 - PPFIA2 chr12 81747118 - Exonic hg19 SARC TCGA-3B-A9HS-01A 21 11 In-Frame Inter-chr q35.3 q21.31 Seq+ 63526 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GFRA1-DGKB GFRA1 chr10 118029015 - DGKB chr7 14733819 - Exonic hg19 BRCA TCGA-AQ-A04L-01B 25 18 Out-of-frame Inter-chr q25.3 p21.2 Seq+ 63527 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GFRA3-TTC8 GFRA3 chr5 137588976 - TTC8 chr14 89341370 + Exonic hg19 PCPG TCGA-TT-A6YN-01A 524 365 In-Frame Inter-chr q31.2 q31.3 Seq+ 63528 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GGA1-CDC42EP1 GGA1 chr22 38004910 - CDC42EP1 chr22 37962079 + Exonic hg19 PCPG TCGA-P7-A5NX-01A 16 25 5'UTR-5'UTR Intra-chr q13.1 q13.1 Seq+ 63529 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GGA2-PRKCB GGA2 chr16 23502998 - PRKCB chr16 23999829 + Exonic hg19 LGG TCGA-HT-A5RC-01A 23 7 In-Frame Intra-chr p12.2 p12.2 Tumor suppressor gene Seq+ 63530 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GGA2-TNFAIP8L2 GGA2 chr16 23502998 - TNFAIP8L2 chr1 151131142 + Exonic hg19 LGG TCGA-HT-A61B-01A 13 1 CDS-5'UTR Inter-chr p12.2 q21.3 Tumor suppressor gene 63531 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GGA3-ATF7 GGA3 chr17 73235870 - ATF7 chr12 53901811 - Exonic hg19 BRCA TCGA-GM-A2DL-01A 10 11 3'UTR-3'UTR Inter-chr q25.1 q13.13 Transcription factor Seq+ 63532 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GGNBP2-NEBL GGNBP2 chr17 34901666 - NEBL chr10 21101869 - Exonic hg19 CESC TCGA-C5-A3HD-01B 121 61 In-Frame Inter-chr Tumor suppressor gene p12.31 Seq+ 63533 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GGNBP2-ZDHHC16 GGNBP2 chr17 34937968 - ZDHHC16 chr10 99216534 + Exonic hg19 THCA TCGA-ET-A40R-01A 3 3 Out-of-frame Inter-chr Tumor suppressor gene q24.1 Seq+ 63534 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GGNBP2-ZMAT4 GGNBP2 chr17 34913176 - ZMAT4 chr8 40554920 - Exonic hg19 BLCA TCGA-GD-A2C5-01A 9 8 Out-of-frame Inter-chr Tumor suppressor gene p11.21 Transcription factor Seq+ 63535 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GGT1-PRODH GGT1 chr22 24990853 - PRODH chr22 18918711 - Exonic hg19 PRAD TCGA-J4-AATZ-01A 11 7 5'UTR-5'UTR Intra-chr q11.23 q11.21 Tumor suppressor gene Seq+ 63536 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GGT6-AC091153.1 GGT6 chr17 4463677 - AC091153.1 chr17 4580107 - Exonic hg19 BRCA TCGA-AN-A0FX-01A 12 10 Out-of-frame Intra-chr p13.2 p13.2 63537 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GHR-GPR68 GHR chr5 42566046 - GPR68 chr14 91701523 - Exonic hg19 HNSC TCGA-HD-A6HZ-01A 3 1 CDS-5'UTR Inter-chr p13.1 q32.11 63538 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GHRL-SEC13 GHRL chr3 10328388 - SEC13 chr3 10343058 - Exonic hg19 UCEC TCGA-PG-A915-01A 93 64 Out-of-frame Intra-chr p25.3 p25.3 Seq+ 63539 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GIGYF2-CHRND GIGYF2 chr2 233613792 - CHRND chr2 233398641 + Exonic hg19 BRCA TCGA-AR-A256-01A 8 5 In-Frame Intra-chr q37.1 q37.1 Seq+ 63540 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GIGYF2-COG4 GIGYF2 chr2 233671367 - COG4 chr16 70551643 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 4 19 Out-of-frame Inter-chr q37.1 q22.1 Seq+ 63541 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GIGYF2-DIS3L2 GIGYF2 chr2 233613792 - DIS3L2 chr2 232952197 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 19 12 In-Frame Intra-chr q37.1 q37.1 Seq+ 63542 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GIGYF2-EFHD1 GIGYF2 chr2 233562102 - EFHD1 chr2 233546295 + Exonic hg19 LUSC TCGA-94-8491-01A 2 25 5'UTR-CDS Intra-chr q37.1 q37.1 Seq+ 63543 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GIGYF2-EFHD1 GIGYF2 chr2 233599948 - EFHD1 chr2 233527512 + Exonic hg19 BRCA TCGA-A8-A07U-01A 9 4 In-Frame Intra-chr q37.1 q37.1 Seq+ 63544 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GIGYF2-EFHD1 GIGYF2 chr2 233613792 - EFHD1 chr2 233537019 + Exonic hg19 BRCA TCGA-B6-A0IJ-01A 204 154 In-Frame Intra-chr q37.1 q37.1 Seq+ 63545 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GIGYF2-EFHD1 GIGYF2 chr2 233589401 - EFHD1 chr2 233546295 + Exonic hg19 UCS TCGA-N8-A56S-01A 8 1 5'UTR-CDS Intra-chr q37.1 q37.1 Seq+ 63546 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GIGYF2-EIF4E2 GIGYF2 chr2 233612454 - EIF4E2 chr2 233438973 + Exonic hg19 TGCT TCGA-2G-AALQ-01A 8 7 Out-of-frame Intra-chr q37.1 q37.1 Seq+ 63547 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GIGYF2-EIF4E2 GIGYF2 chr2 233599948 - EIF4E2 chr2 233421126 + Exonic hg19 BRCA TCGA-D8-A140-01A 65 52 In-Frame Intra-chr q37.1 q37.1 Seq+ 63548 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GIGYF2-HEATR7B1 GIGYF2 chr2 233599948 - HEATR7B1 chr2 234719440 + Exonic hg19 BLCA TCGA-G2-A2EL-01A 14 10 Out-of-frame Intra-chr q37.1 63549 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GIGYF2-NGEF GIGYF2 chr2 233684695 - NGEF chr2 233759626 - Exonic hg19 LGG TCGA-P5-A72U-01A 43 63 In-Frame Intra-chr q37.1 q37.1 Seq+ 63550 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GIGYF2-SP2 GIGYF2 chr2 233671367 - SP2 chr17 45992678 + Exonic hg19 UCEC TCGA-AX-A3FW-01A 3 4 Out-of-frame Inter-chr q37.1 q21.32 Transcription factor Seq+ 63551 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GIGYF2-TMEM163 GIGYF2 chr2 233568199 - TMEM163 chr2 135309662 - Exonic hg19 PRAD TCGA-KK-A7B4-01A 7 4 5'UTR-CDS Intra-chr q37.1 q21.3 Seq+ 63552 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GINS2-C16orf74 GINS2 chr16 85722415 - C16orf74 chr16 85768841 - Exonic hg19 BLCA TCGA-E7-A541-01A 4 1 CDS-5'UTR Intra-chr q24.1 q24.1 63553 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GINS4-UQCRC2 GINS4 chr8 41387817 - UQCRC2 chr16 21994409 + Exonic hg19 BRCA TCGA-E9-A54Y-01A 25 31 In-Frame Inter-chr p11.21 Seq+ 63554 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GIPC1-UBL3 GIPC1 chr19 14602468 - UBL3 chr13 30351400 - Exonic hg19 OV TCGA-25-1870-01A 3 6 5'UTR-CDS Inter-chr p13.12 q12.3 Seq+ 63555 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GIPR-PRR12 GIPR chr19 46181484 - PRR12 chr19 50117790 + Exonic hg19 LUAD TCGA-67-4679-01B 5 2 In-Frame Intra-chr q13.32 q13.33 Transcription factor 63556 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GIPR-RBM42 GIPR chr19 46173992 - RBM42 chr19 36128060 + Exonic hg19 ESCA TCGA-L5-A891-01A 4 28 In-Frame Intra-chr q13.32 q13.12 Seq+ 63557 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GIT2-SLC2A13 GIT2 chr12 110426768 - SLC2A13 chr12 40345167 - Exonic hg19 TGCT TCGA-2G-AAF6-01A 3 4 Out-of-frame Intra-chr q24.11 q12 Seq+ 63558 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GIT2-SMYD5 GIT2 chr12 110429432 - SMYD5 chr2 73445989 + Exonic hg19 SKCM TCGA-FW-A3TV-06A 41 19 In-Frame Inter-chr q24.11 p13.2 Seq+ 63559 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GJA1-STAT6 GJA1 chr6 121770873 - STAT6 chr12 57496773 - Exonic hg19 ACC TCGA-OR-A5K1-01A 2 8 Out-of-frame Inter-chr q22.31 Tumor suppressor gene q13.3 Transcription factor 63560 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GJC1-SKAP1 GJC1 chr17 42884762 - SKAP1 chr17 46266862 - Exonic hg19 ACC TCGA-OR-A5JS-01A 43 37 5'UTR-CDS Intra-chr q21.31 q21.32 Seq+ 63561 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GK5-CENPL GK5 chr3 141934441 - CENPL chr1 173780444 - Exonic hg19 BRCA TCGA-PL-A8LZ-01A 11 5 CDS-5'UTR Inter-chr q23 q25.1 Seq+ 63562 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GK5-MBNL1 GK5 chr3 141932368 - MBNL1 chr3 152132730 + Exonic hg19 BRCA TCGA-A2-A0CL-01A 7 6 Out-of-frame Intra-chr q23 q25.1 Seq+ 63563 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GK5-PAQR9 GK5 chr3 141917644 - PAQR9 chr3 142671692 - Exonic hg19 LUAD TCGA-91-8499-01A 5 5 3'UTR-3'UTR Intra-chr q23 q23 Seq+ 63564 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GKAP1-ARIH1 GKAP1 chr9 86414100 - ARIH1 chr15 72810408 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 6 2 In-Frame Inter-chr q21.32 q24.1 Seq+ 63565 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLA-HNRNPH2 GLA chrX 100662698 - HNRNPH2 chrX 100666924 + Exonic hg19 BRCA TCGA-S3-A6ZF-01A 146 103 CDS-5'UTR Intra-chr q22.1 q22.1 Seq+ 63566 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLB1-INSC GLB1 chr3 33109722 - INSC chr11 15260465 + Exonic hg19 LGG TCGA-FG-5963-01A 6 5 In-Frame Inter-chr p22.3 p15.2 Seq+ 63567 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLB1-INSC GLB1 chr3 33109722 - INSC chr11 15260465 + Exonic hg19 LGG TCGA-FG-5963-02A 17 8 In-Frame Inter-chr p22.3 p15.2 Seq+ 63568 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLB1-PSD2 GLB1 chr3 33094983 - PSD2 chr5 139215308 + Exonic hg19 PRAD TCGA-KK-A7B1-01A 14 8 In-Frame Inter-chr p22.3 q31.2 Seq+ 63569 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLCCI1-AC006465.3 GLCCI1 chr7 8043689 - AC006465.3 chr7 7841301 + Exonic hg19 LIHC TCGA-DD-A11C-01A 3 4 Out-of-frame Intra-chr p21.3 63570 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLCCI1-DGKB GLCCI1 chr7 8009438 - DGKB chr7 14881075 - Exonic hg19 SKCM TCGA-EB-A44R-06A 3 3 CDS-5'UTR Intra-chr p21.3 p21.2 Seq+ 63571 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLCE-NOX5 GLCE chr15 69453096 - NOX5 chr15 69267068 + Exonic hg19 BRCA TCGA-A8-A09C-01A 2 1 5'UTR-5'UTR Intra-chr q23 q23 Seq+ 63572 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLCE-SPESP1 GLCE chr15 69453096 - SPESP1 chr15 69237938 + Exonic hg19 BRCA TCGA-A8-A09C-01A 2 2 5'UTR-CDS Intra-chr q23 q23 Seq+ 63573 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLE1-ODF2 GLE1 chr9 131267183 - ODF2 chr9 131254705 + Exonic hg19 OV TCGA-61-1998-01A 2 7 In-Frame Intra-chr q34.11 q34.11 Seq+ 63574 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLE1-SLC27A4 GLE1 chr9 131271376 - SLC27A4 chr9 131117677 + Exonic hg19 SKCM TCGA-WE-A8K1-06A 11 11 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 63575 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLG1-CFDP1 GLG1 chr16 74566019 - CFDP1 chr16 75327940 - Exonic hg19 LUSC TCGA-43-2578-01A 104 18 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 63576 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLG1-CFDP1 GLG1 chr16 74640555 - CFDP1 chr16 75339080 - Exonic hg19 STAD TCGA-BR-4357-01A 10 6 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 63577 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLG1-CFDP1 GLG1 chr16 74640555 - CFDP1 chr16 75327940 - Exonic hg19 LGG TCGA-DU-6542-01A 41 7 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 63578 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLG1-COG4 GLG1 chr16 74640555 - COG4 chr16 70553634 - Exonic hg19 BRCA TCGA-BH-A1F8-01A 38 22 In-Frame Intra-chr q23.1 q22.1 Seq+ 63579 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLI2-MARCO GLI2 chr2 121555044 - MARCO chr2 119726736 + Exonic hg19 SARC TCGA-DX-AB2O-01A 6 6 In-Frame Intra-chr q14.2 Transcription factor q14.2 Seq+ 63580 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLI2-SPOP GLI2 chr2 121685042 - SPOP chr17 47700238 - Exonic hg19 SARC TCGA-DX-A6YV-01A 76 58 CDS-5'UTR Inter-chr q14.2 Transcription factor q21.33 Oncogene Tumor suppressor gene Seq+ 63581 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLI3-C7orf10 GLI3 chr7 42262729 - C7orf10 chr7 40789033 + Exonic hg19 KIRC TCGA-CJ-5683-01A 40 25 Out-of-frame Intra-chr p14.1 Transcription factor Seq+ 63582 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLI3-C7orf23 GLI3 chr7 42063067 - C7orf23 chr7 86828373 - Exonic hg19 LGG TCGA-FG-5963-01A 4 7 In-Frame Intra-chr p14.1 Transcription factor Seq+ 63583 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLI3-C7orf23 GLI3 chr7 42063067 - C7orf23 chr7 86828373 - Exonic hg19 LGG TCGA-FG-5963-02A 13 12 In-Frame Intra-chr p14.1 Transcription factor Seq+ 63584 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLI3-CROT GLI3 chr7 42116351 - CROT chr7 86975656 + Exonic hg19 LUSC TCGA-77-7465-01A 17 18 CDS-5'UTR Intra-chr p14.1 Transcription factor q21.12 Seq+ 63585 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLI3-HIBADH GLI3 chr7 42187825 - HIBADH chr7 27672064 - Exonic hg19 LUAD TCGA-50-6591-01A 30 11 Out-of-frame Intra-chr p14.1 Transcription factor p15.2 Seq+ 63586 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLI3-PGC GLI3 chr7 42187825 - PGC chr6 41704742 - Exonic hg19 SARC TCGA-DX-A23T-01A 12 8 Out-of-frame Inter-chr p14.1 Transcription factor p21.1 Seq+ 63587 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLI3-VSTM2A GLI3 chr7 42116351 - VSTM2A chr7 54612315 + Exonic hg19 PRAD TCGA-TP-A8TV-01A 4 1 Out-of-frame Intra-chr p14.1 Transcription factor p11.2 63588 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLIPR1-CDK17 GLIPR1 chr12 75875859 - CDK17 chr12 96728643 - Exonic hg19 SARC TCGA-3B-A9HS-01A 27 10 CDS-5'UTR Intra-chr q21.2 Tumor suppressor gene q23.1 Seq+ 63589 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLIPR1L1-RAB3IP GLIPR1L1 chr12 75728682 - RAB3IP chr12 70149164 + Exonic hg19 SARC TCGA-DX-A3LS-01A 8 12 Out-of-frame Intra-chr q21.2 q15 Seq+ 63590 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLIS3-ARHGAP1 GLIS3 chr9 4299421 - ARHGAP1 chr11 46717706 - Exonic hg19 LUAD TCGA-83-5908-01A 2 2 5'UTR-5'UTR Inter-chr p24.2 Transcription factor p11.2 Seq+ 63591 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLIS3-C9orf46 GLIS3 chr9 4117768 - C9orf46 chr9 5361888 - Exonic hg19 KIRC TCGA-BP-5192-01A 39 27 Out-of-frame Intra-chr p24.2 Transcription factor 63592 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLIS3-CTNNA2 GLIS3 chr9 4117768 - CTNNA2 chr2 80874710 + Exonic hg19 HNSC TCGA-CN-5365-01A 3 1 In-Frame Inter-chr p24.2 Transcription factor p12 Tumor suppressor gene 63593 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLIS3-GOLM1 GLIS3 chr9 4286038 - GOLM1 chr9 88661487 - Exonic hg19 LIHC TCGA-UB-A7MB-01A 6 5 In-Frame Intra-chr p24.2 Transcription factor q21.33 Seq+ 63594 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLIS3-IL17REL GLIS3 chr9 3932360 - IL17REL chr22 50439660 - Exonic hg19 SARC TCGA-VT-A80G-01A 4 1 CDS-5'UTR Inter-chr p24.2 Transcription factor q13.33 Seq+ 63595 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLIS3-KIAA0020 GLIS3 chr9 4286038 - KIAA0020 chr9 2838517 - Exonic hg19 LGG TCGA-HT-7882-01A 19 8 CDS-5'UTR Intra-chr p24.2 Transcription factor Seq+ 63596 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLIS3-RCL1 GLIS3 chr9 4286038 - RCL1 chr9 4823548 + Exonic hg19 KIRC TCGA-BP-4983-01A 213 139 In-Frame Intra-chr p24.2 Transcription factor p24.1 Seq+ 63597 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLIS3-TERT GLIS3 chr9 4117768 - TERT chr5 1282739 - Exonic hg19 SARC TCGA-DX-A3LS-01A 10 1 Out-of-frame Inter-chr p24.2 Transcription factor p15.33 Oncogene Seq+ 63598 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLO1-KIF6 GLO1 chr6 38670747 - KIF6 chr6 39387779 - Exonic hg19 PRAD TCGA-HC-A6AP-01A 2 4 Out-of-frame Intra-chr p21.2 p21.2 Seq+ 63599 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLO1-UBR2 GLO1 chr6 38670747 - UBR2 chr6 42571326 + Exonic hg19 SARC TCGA-3B-A9HL-01A 4 2 In-Frame Intra-chr p21.2 p21.1 63600 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLOD4-NPLOC4 GLOD4 chr17 673109 - NPLOC4 chr17 79589304 - Exonic hg19 SARC TCGA-JV-A5VE-01A 16 14 In-Frame Intra-chr p13.3 q25.3 Seq+ 63601 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLRX3-C10orf11 GLRX3 chr10 131973353 - C10orf11 chr10 78084159 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 2 4 In-Frame Intra-chr q26.3 Seq+ 63602 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLRX3-SGMS1 GLRX3 chr10 131934776 - SGMS1 chr10 52279681 - Exonic hg19 ESCA TCGA-L5-A43E-01A 4 18 CDS-5'UTR Intra-chr q26.3 q11.23 Tumor suppressor gene Seq+ 63603 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLS-ANKAR GLS chr2 191796363 - ANKAR chr2 190609468 + Exonic hg19 UCEC TCGA-AJ-A3BF-01A 10 7 Out-of-frame Intra-chr q32.2 Tumor suppressor gene q32.2 Seq+ 63604 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLT1D1-CTNNA2 GLT1D1 chr12 129338194 - CTNNA2 chr2 80772107 + Exonic hg19 MESO TCGA-TS-A8AY-01A 2 6 Out-of-frame Inter-chr q24.33 p12 Tumor suppressor gene Seq+ 63605 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLT25D1-COPE GLT25D1 chr19 17671274 - COPE chr19 19021880 - Exonic hg19 LGG TCGA-TM-A7CF-01A 21 19 In-Frame Intra-chr p13.11 Seq+ 63606 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLT25D1-CYP4F11 GLT25D1 chr19 17671274 - CYP4F11 chr19 16040411 - Exonic hg19 HNSC TCGA-CN-A641-01A 8 6 In-Frame Intra-chr p13.12 63607 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLT25D1-PTN GLT25D1 chr19 17693965 - PTN chr7 136938384 - Exonic hg19 LUSC TCGA-77-8009-01A 2 11 3'UTR-CDS Inter-chr q33 63608 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLT8D1-PLXNB1 GLT8D1 chr3 52729206 - PLXNB1 chr3 48445997 - Exonic hg19 MESO TCGA-UD-AABY-01A 7 5 Out-of-frame Intra-chr p21.1 p21.31 Seq+ 63609 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLT8D2-YY1 GLT8D2 chr12 104396913 - YY1 chr14 100741035 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 131 91 In-Frame Inter-chr q23.3 q32.2 Transcription factor Seq+ 63610 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLUL-DDX27 GLUL chr1 182352029 - DDX27 chr20 47849303 + Exonic hg19 BRCA TCGA-A1-A0SJ-01A 2 1 Out-of-frame Inter-chr q25.3 q13.13 63611 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLUL-EIF2AK2 GLUL chr1 182352029 - EIF2AK2 chr2 37342384 - Exonic hg19 BRCA TCGA-B6-A0IM-01A 2 2 Out-of-frame Inter-chr q25.3 p22.2 63612 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLUL-NDUFV1 GLUL chr1 182352029 - NDUFV1 chr11 67375697 + Exonic hg19 BRCA TCGA-D8-A1XS-01A 2 6 Out-of-frame Inter-chr q25.3 q13.2 63613 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLUL-SEC63 GLUL chr1 182352029 - SEC63 chr6 108214782 - Exonic hg19 LGG TCGA-HT-7610-01A 2 2 Out-of-frame Inter-chr q25.3 q21 63614 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLUL-STAT6 GLUL chr1 182352029 - STAT6 chr12 57496773 - Exonic hg19 LIHC TCGA-DD-AAEE-01A 2 1 Out-of-frame Inter-chr q25.3 q13.3 Transcription factor 63615 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLUL-UNC13A GLUL chr1 182352029 - UNC13A chr19 17786850 - Exonic hg19 LGG TCGA-HT-7608-01A 2 3 3'UTR-CDS Inter-chr q25.3 p13.11 63616 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLYCTK-ALAS1 GLYCTK chr3 52325127 - ALAS1 chr3 52245299 + Exonic hg19 BRCA TCGA-OL-A5D7-01A 13 8 In-Frame Intra-chr p21.2 p21.2 Seq+ 63617 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GLYR1-C16orf89 GLYR1 chr16 4861171 - C16orf89 chr16 5097965 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 73 36 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 63618 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GMCL1-ANXA4 GMCL1 chr2 70057284 - ANXA4 chr2 70008652 + Exonic hg19 LUAD TCGA-69-8255-01A 35 25 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 63619 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GMCL1-ANXA4 GMCL1 chr2 70057284 - ANXA4 chr2 70008652 + Exonic hg19 STAD TCGA-BR-8289-01A 13 51 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 63620 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GMCL1-DYSF GMCL1 chr2 70057284 - DYSF chr2 71708013 + Exonic hg19 TGCT TCGA-4K-AA1G-01A 2 5 Out-of-frame Intra-chr p13.3 p13.2 Seq+ 63621 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GMDS-BCAS3 GMDS chr6 1624041 - BCAS3 chr17 59465980 + Exonic hg19 PRAD TCGA-EJ-A7NF-01A 3 1 Out-of-frame Inter-chr p25.3 q23.2 63622 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GMDS-C6orf186 GMDS chr6 1930337 - C6orf186 chr6 110644075 - Exonic hg19 BRCA TCGA-B6-A0I1-01A 4 7 Out-of-frame Intra-chr p25.3 63623 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GMDS-CCND3 GMDS chr6 2245555 - CCND3 chr6 41905132 - Exonic hg19 PRAD TCGA-G9-6353-01A 8 6 In-Frame Intra-chr p25.3 p21.1 Seq+ 63624 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GMDS-DNAH8 GMDS chr6 2116005 - DNAH8 chr6 38919094 + Exonic hg19 BRCA TCGA-A8-A08X-01A 2 3 Out-of-frame Intra-chr p25.3 p21.2 63625 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GMDS-EXOC2 GMDS chr6 1726650 - EXOC2 chr6 556564 - Exonic hg19 SARC TCGA-DX-A8BU-01A 12 4 In-Frame Intra-chr p25.3 p25.3 Seq+ 63626 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GMDS-KIF6 GMDS chr6 2245555 - KIF6 chr6 39688587 - Exonic hg19 CESC TCGA-DG-A2KL-01A 2 2 In-Frame Intra-chr p25.3 p21.2 Seq+ 63627 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GMDS-MRPS18B GMDS chr6 1726650 - MRPS18B chr6 30590609 + Exonic hg19 BLCA TCGA-K4-A3WV-01A 22 12 In-Frame Intra-chr p25.3 Seq+ 63628 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GMDS-PPP1R11 GMDS chr6 1930337 - PPP1R11 chr6 30036367 + Exonic hg19 DLBC TCGA-VB-A8QN-01A 6 8 In-Frame Intra-chr p25.3 Seq+ 63629 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GMDS-TMTC2 GMDS chr6 2245555 - TMTC2 chr12 83324210 + Exonic hg19 READ TCGA-BM-6198-01A 18 17 Out-of-frame Inter-chr p25.3 q21.31 Seq+ 63630 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GMDS-VAPB GMDS chr6 1930337 - VAPB chr20 57019133 + Exonic hg19 PAAD TCGA-IB-7647-01A 179 255 In-Frame Inter-chr p25.3 q13.32 Seq+ 63631 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GMEB1-TRNAU1AP GMEB1 chr1 28995351 - TRNAU1AP chr1 28897688 + Exonic hg19 OV TCGA-24-2023-01A 2 15 5'UTR-5'UTR Intra-chr p35.3 Transcription factor p35.3 Seq+ 63632 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GMEB1-TRNAU1AP GMEB1 chr1 29019557 - TRNAU1AP chr1 28887145 + Exonic hg19 BLCA TCGA-DK-A6B2-01A 4 8 In-Frame Intra-chr p35.3 Transcription factor p35.3 Seq+ 63633 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GMEB2-RALY GMEB2 chr20 62234318 - RALY chr20 32659872 + Exonic hg19 READ TCGA-DY-A1DD-01A 46 28 CDS-5'UTR Intra-chr q13.33 Transcription factor q11.22 Seq+ 63634 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GMEB2-STMN3 GMEB2 chr20 62223375 - STMN3 chr20 62275662 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 3 5 In-Frame Intra-chr q13.33 Transcription factor q13.33 Seq+ 63635 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GML-C8orf47 GML chr8 143922641 - C8orf47 chr8 99101304 + Exonic hg19 LUAD TCGA-67-3771-01A 3 1 In-Frame Intra-chr q24.3 63636 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GMPR-C8orf38 GMPR chr6 16254966 - C8orf38 chr8 96044223 + Exonic hg19 BRCA TCGA-A8-A08P-01A 5 7 Out-of-frame Inter-chr p22.3 63637 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GMPS-C3orf55 GMPS chr3 155588686 - C3orf55 chr3 157271019 + Exonic hg19 LUSC TCGA-66-2766-01A 597 244 CDS-5'UTR Intra-chr q25.31 Seq+ 63638 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNA11-TMCO3 GNA11 chr19 3094785 - TMCO3 chr13 114174931 + Exonic hg19 SARC TCGA-HB-A3YV-01A 27 22 In-Frame Inter-chr p13.3 Oncogene q34 Seq+ 63639 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNA12-ADSS GNA12 chr7 2834562 - ADSS chr1 244601070 - Exonic hg19 BRCA TCGA-E9-A1N6-01A 13 11 CDS-5'UTR Inter-chr p22.2 q44 Seq+ 63640 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNA12-AMACR GNA12 chr7 2883487 - AMACR chr5 33998932 - Exonic hg19 BLCA TCGA-GV-A40E-01A 3 1 In-Frame Inter-chr p22.2 p13.2 63641 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNA12-CUL1 GNA12 chr7 2834562 - CUL1 chr7 148427054 + Exonic hg19 SARC TCGA-JV-A75J-01A 28 15 CDS-5'UTR Intra-chr p22.2 q36.1 Tumor suppressor gene Seq+ 63642 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNA12-PHC3 GNA12 chr7 2883487 - PHC3 chr3 169896726 - Exonic hg19 HNSC TCGA-CQ-A4CA-01A 15 2 Out-of-frame Inter-chr p22.2 q26.2 Tumor suppressor gene Seq+ 63643 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNA13-ASPSCR1 GNA13 chr17 63049620 - ASPSCR1 chr17 79966913 + Exonic hg19 COAD TCGA-D5-6929-01A 89 62 In-Frame Intra-chr q24.1 q25.3 Seq+ 63644 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNA13-BMI1 GNA13 chr17 63049620 - BMI1 chr10 22617063 + Exonic hg19 HNSC TCGA-CV-7429-01A 32 17 Out-of-frame Inter-chr q24.1 p12.2 Seq+ 63645 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNA13-C9orf93 GNA13 chr17 63049620 - C9orf93 chr9 15846700 + Exonic hg19 LUSC TCGA-60-2722-01A 2 3 Out-of-frame Inter-chr q24.1 63646 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNA13-CEP112 GNA13 chr17 63049620 - CEP112 chr17 63637183 - Exonic hg19 LUSC TCGA-33-6738-01A 3 1 In-Frame Intra-chr q24.1 q24.1 63647 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNA13-MXRA7 GNA13 chr17 63049620 - MXRA7 chr17 74681247 - Exonic hg19 UCS TCGA-N8-A4PQ-01A 10 14 Out-of-frame Intra-chr q24.1 q25.1 Seq+ 63648 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNA13-NR3C1 GNA13 chr17 63049620 - NR3C1 chr5 142662290 - Exonic hg19 LGG TCGA-DU-7006-01A 8 8 Out-of-frame Inter-chr q24.1 q31.3 Transcription factor Seq+ 63649 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNA13-SLC39A11 GNA13 chr17 63049620 - SLC39A11 chr17 71027853 - Exonic hg19 READ TCGA-EF-5831-01A 13 4 In-Frame Intra-chr q24.1 q25.1 Seq+ 63650 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNA13-TOM1 GNA13 chr17 63049620 - TOM1 chr22 35713870 + Exonic hg19 STAD TCGA-KB-A93J-01A 3 23 Out-of-frame Inter-chr q24.1 q12.3 Seq+ 63651 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNA14-C9orf156 GNA14 chr9 80049284 - C9orf156 chr9 100667274 - Exonic hg19 BRCA TCGA-A2-A4RW-01A 2 1 Out-of-frame Intra-chr q21.2 63652 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNA14-TNFSF8 GNA14 chr9 80262586 - TNFSF8 chr9 117680418 - Exonic hg19 COAD TCGA-AY-6196-01A 2 1 Out-of-frame Intra-chr q21.2 q33.1 Seq+ 63653 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAI3-CASQ2 GNAI3 chr1 110091460 - CASQ2 chr1 116287533 - Exonic hg19 BRCA TCGA-AR-A24Q-01A 11 6 Out-of-frame Intra-chr p13.3 p13.1 Seq+ 63654 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAI3-CYB561D1 GNAI3 chr1 110129504 - CYB561D1 chr1 110037765 + Exonic hg19 ESCA TCGA-2H-A9GN-01A 2 14 In-Frame Intra-chr p13.3 p13.3 Seq+ 63655 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAI3-GPR61 GNAI3 chr1 110091460 - GPR61 chr1 110087933 + Exonic hg19 LGG TCGA-QH-A6CV-01A 7 6 CDS-3'UTR Intra-chr p13.3 p13.3 Seq+ 63656 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAI3-KIAA1324 GNAI3 chr1 110116659 - KIAA1324 chr1 109707121 + Exonic hg19 BRCA TCGA-AN-A0AL-01A 2 6 Out-of-frame Intra-chr p13.3 p13.3 63657 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAI3-SARS GNAI3 chr1 110091460 - SARS chr1 109766600 + Exonic hg19 BRCA TCGA-E2-A14P-01A 198 151 In-Frame Intra-chr p13.3 p13.3 Seq+ 63658 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAL-CSNK1E GNAL chr18 11753944 - CSNK1E chr22 38699253 - Exonic hg19 BRCA TCGA-AO-A03V-01A 2 2 Out-of-frame Inter-chr p11.21 q13.1 Seq+ 63659 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAO1-FTO GNAO1 chr16 56226528 - FTO chr16 53967897 + Exonic hg19 SARC TCGA-WP-A9GB-01A 31 13 Out-of-frame Intra-chr q13 q12.2 Seq+ 63660 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAQ-C9orf64 GNAQ chr9 80409379 - C9orf64 chr9 86559904 - Exonic hg19 BRCA TCGA-E2-A159-01A 3 11 In-Frame Intra-chr q21.2 Oncogene q21.32 Seq+ 63661 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-AP1G2 GNAS chr20 57486247 - AP1G2 chr14 24037279 - Exonic hg19 KIRP TCGA-DW-7836-01A 2 57 5'UTR-5'UTR Inter-chr q13.32 Oncogene q11.2 63662 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-ARFGEF2 GNAS chr20 57486241 - ARFGEF2 chr20 47615777 + Exonic hg19 KICH TCGA-KN-8423-01A 2 33 Out-of-frame Intra-chr q13.32 Oncogene q13.13 63663 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-BIRC6 GNAS chr20 57486247 - BIRC6 chr2 32820101 + Exonic hg19 LIHC TCGA-CC-A5UD-01A 2 29 5'UTR-CDS Inter-chr q13.32 Oncogene p22.3 63664 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-BIRC6 GNAS chr20 57486241 - BIRC6 chr2 32820101 + Exonic hg19 LGG TCGA-CS-6668-01A 2 12 5'UTR-CDS Inter-chr q13.32 Oncogene p22.3 63665 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-CLCN3 GNAS chr20 57486241 - CLCN3 chr4 170623929 + Exonic hg19 THCA TCGA-ET-A25I-01A 2 8 Out-of-frame Inter-chr q13.32 Oncogene q33 63666 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-CLIP1 GNAS chr20 57486241 - CLIP1 chr12 122819252 - Exonic hg19 THCA TCGA-DE-A2OL-01A 2 7 5'UTR-CDS Inter-chr q13.32 Oncogene q24.31 63667 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-CLIP1 GNAS chr20 57486241 - CLIP1 chr12 122819252 - Exonic hg19 KICH TCGA-KN-8435-01A 2 12 5'UTR-CDS Inter-chr q13.32 Oncogene q24.31 63668 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-EEA1 GNAS chr20 57486241 - EEA1 chr12 93229203 - Exonic hg19 HNSC TCGA-CN-6010-01A 2 8 Out-of-frame Inter-chr q13.32 Oncogene q22 Transcription factor 63669 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-EIF2AK2 GNAS chr20 57486241 - EIF2AK2 chr2 37342384 - Exonic hg19 PCPG TCGA-QT-A5XJ-01A 2 24 Out-of-frame Inter-chr q13.32 Oncogene p22.2 63670 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-ELK3 GNAS chr20 57486247 - ELK3 chr12 96588323 + Exonic hg19 THCA TCGA-IM-A3EB-01A 2 31 Out-of-frame Inter-chr q13.32 Oncogene q23.1 Transcription factor 63671 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-FN1 GNAS chr20 57486247 - FN1 chr2 216274837 - Exonic hg19 PRAD TCGA-G9-6496-01A 2 5 5'UTR-CDS Inter-chr q13.32 Oncogene q35 Oncogene 63672 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-FOXP1 GNAS chr20 57486241 - FOXP1 chr3 71007472 - Exonic hg19 KICH TCGA-KM-8442-01A 2 44 Out-of-frame Inter-chr q13.32 Oncogene p13 Oncogene Tumor suppressor gene Transcription factor 63673 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-FOXP1 GNAS chr20 57486241 - FOXP1 chr3 71007472 - Exonic hg19 THYM TCGA-XU-A92U-01A 2 27 Out-of-frame Inter-chr q13.32 Oncogene p13 Oncogene Tumor suppressor gene Transcription factor 63674 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-HEG1 GNAS chr20 57486241 - HEG1 chr3 124692749 - Exonic hg19 THCA TCGA-DJ-A13S-01A 2 7 5'UTR-CDS Inter-chr q13.32 Oncogene q21.2 63675 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-HEG1 GNAS chr20 57486241 - HEG1 chr3 124692749 - Exonic hg19 THCA TCGA-H2-A2K9-01A 2 8 5'UTR-CDS Inter-chr q13.32 Oncogene q21.2 63676 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-ITGAV GNAS chr20 57486241 - ITGAV chr2 187540547 + Exonic hg19 HNSC TCGA-CV-5978-01A 2 5 5'UTR-CDS Inter-chr q13.32 Oncogene q32.1 Tumor suppressor gene 63677 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-PLXNC1 GNAS chr20 57486241 - PLXNC1 chr12 94642003 + Exonic hg19 PCPG TCGA-RW-A686-06A 2 12 5'UTR-CDS Inter-chr q13.32 Oncogene q22 Tumor suppressor gene 63678 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-PSAP GNAS chr20 57486241 - PSAP chr10 73579657 - Exonic hg19 ACC TCGA-OR-A5JG-01A 2 1 5'UTR-CDS Inter-chr q13.32 Oncogene q22.1 63679 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-SEC63 GNAS chr20 57486241 - SEC63 chr6 108214782 - Exonic hg19 THCA TCGA-EM-A3OB-01A 2 120 Out-of-frame Inter-chr q13.32 Oncogene q21 63680 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-SIAE GNAS chr20 57486241 - SIAE chr11 124543777 - Exonic hg19 THCA TCGA-BJ-A192-01A 2 9 5'UTR-5'UTR Inter-chr q13.32 Oncogene q24.2 63681 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-SIAE GNAS chr20 57486241 - SIAE chr11 124543777 - Exonic hg19 THCA TCGA-ET-A3BQ-01B 2 3 5'UTR-5'UTR Inter-chr q13.32 Oncogene q24.2 63682 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-SMAP2 GNAS chr20 57486241 - SMAP2 chr1 40878688 + Exonic hg19 HNSC TCGA-H7-7774-01A 2 21 5'UTR-CDS Inter-chr q13.32 Oncogene p34.2 63683 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-SNW1 GNAS chr20 57486241 - SNW1 chr14 78189203 - Exonic hg19 CESC TCGA-JX-A3PZ-01A 2 17 Out-of-frame Inter-chr q13.32 Oncogene q24.3 63684 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-SUPT16H GNAS chr20 57486241 - SUPT16H chr14 21829491 - Exonic hg19 LUSC TCGA-85-8664-01A 2 14 Out-of-frame Inter-chr q13.32 Oncogene q11.2 63685 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-SUPT16H GNAS chr20 57486241 - SUPT16H chr14 21829491 - Exonic hg19 BLCA TCGA-FD-A3SL-01A 3 14 Out-of-frame Inter-chr q13.32 Oncogene q11.2 63686 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-THSD4 GNAS chr20 57486241 - THSD4 chr15 72072881 + Exonic hg19 THCA TCGA-ET-A25P-01A 2 1 Out-of-frame Inter-chr q13.32 Oncogene q23 63687 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-TSPAN7 GNAS chr20 57486241 - TSPAN7 chrX 38505515 + Exonic hg19 HNSC TCGA-CQ-6224-01A 2 3 Out-of-frame Inter-chr q13.32 Oncogene p11.4 63688 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-TSPAN7 GNAS chr20 57486241 - TSPAN7 chrX 38505515 + Exonic hg19 ACC TCGA-OR-A5JK-01A 2 7 Out-of-frame Inter-chr q13.32 Oncogene p11.4 63689 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-ZNFX1 GNAS chr20 57486241 - ZNFX1 chr20 47863418 - Exonic hg19 LGG TCGA-CS-5395-01A 2 9 Out-of-frame Intra-chr q13.32 Oncogene q13.13 63690 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNAS-ZNFX1 GNAS chr20 57486247 - ZNFX1 chr20 47863418 - Exonic hg19 THCA TCGA-J8-A3YD-01A 2 37 Out-of-frame Intra-chr q13.32 Oncogene q13.13 63691 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNB1-C1orf222 GNB1 chr1 1756836 - C1orf222 chr1 1861775 - Exonic hg19 TGCT TCGA-2G-AAKH-01A 8 8 Out-of-frame Intra-chr p36.33 63692 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNB1-C1orf222 GNB1 chr1 1822259 - C1orf222 chr1 1891469 - Exonic hg19 LUAD TCGA-49-AARE-01A 3 10 Out-of-frame Intra-chr p36.33 63693 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNB1-C1orf222 GNB1 chr1 1822259 - C1orf222 chr1 1860321 - Exonic hg19 STAD TCGA-BR-A452-01A 2 76 Out-of-frame Intra-chr p36.33 63694 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNB1-C1orf222 GNB1 chr1 1822259 - C1orf222 chr1 1897965 - Exonic hg19 ESCA TCGA-L5-A4OS-01A 5 19 Out-of-frame Intra-chr p36.33 63695 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNB1-CALML6 GNB1 chr1 1822259 - CALML6 chr1 1847880 + Exonic hg19 LUSC TCGA-34-8454-01A 12 62 5'UTR-CDS Intra-chr p36.33 p36.33 Seq+ 63696 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNB1-TSC2 GNB1 chr1 1770629 - TSC2 chr16 2129033 + Exonic hg19 ACC TCGA-P6-A5OF-01A 12 9 5'UTR-CDS Inter-chr p36.33 p13.3 Oncogene Tumor suppressor gene Seq+ 63697 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNB1L-TXNRD2 GNB1L chr22 19841966 - TXNRD2 chr22 19907122 - Exonic hg19 LUSC TCGA-NC-A5HK-01A 16 5 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 63698 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNB2L1-APOB GNB2L1 chr5 180663934 - APOB chr2 21250937 - Exonic hg19 LIHC TCGA-BC-A3KF-01A 2 2 3'UTR-CDS Inter-chr Tumor suppressor gene p24.1 63699 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNB2L1-APOB GNB2L1 chr5 180663934 - APOB chr2 21250937 - Exonic hg19 LIHC TCGA-CC-A3MC-01A 2 11 3'UTR-CDS Inter-chr Tumor suppressor gene p24.1 63700 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNB2L1-DDX21 GNB2L1 chr5 180663929 - DDX21 chr10 70723858 + Exonic hg19 KIRC TCGA-A3-3317-01A 2 5 Out-of-frame Inter-chr Tumor suppressor gene q22.1 63701 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNB2L1-DECR1 GNB2L1 chr5 180663934 - DECR1 chr8 91017676 + Exonic hg19 SKCM TCGA-D3-A2J6-06A 2 8 Out-of-frame Inter-chr Tumor suppressor gene q21.3 63702 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNB2L1-DECR1 GNB2L1 chr5 180663934 - DECR1 chr8 91017676 + Exonic hg19 LGG TCGA-HW-A5KJ-01A 2 3 Out-of-frame Inter-chr Tumor suppressor gene q21.3 63703 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNB2L1-HLTF GNB2L1 chr5 180663934 - HLTF chr3 148780866 - Exonic hg19 SKCM TCGA-EE-A2MT-06A 2 2 Out-of-frame Inter-chr Tumor suppressor gene q24 Tumor suppressor gene 63704 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNB5-PDE6D GNB5 chr15 52433337 - PDE6D chr2 232603912 - Exonic hg19 BRCA TCGA-EW-A1P0-01A 34 8 Out-of-frame Inter-chr q21.2 q37.1 Seq+ 63705 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNE-BICC1 GNE chr9 36246028 - BICC1 chr10 60380615 + Exonic hg19 SKCM TCGA-BF-AAP1-01A 12 2 In-Frame Inter-chr p13.3 q21.1 Seq+ 63706 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNE-ERP27 GNE chr9 36276891 - ERP27 chr12 15073982 - Exonic hg19 BRCA TCGA-A2-A25F-01A 210 71 In-Frame Inter-chr p13.3 p12.3 Seq+ 63707 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNE-ROCK1 GNE chr9 36236829 - ROCK1 chr18 18650574 - Exonic hg19 LUSC TCGA-56-A49D-01A 5 5 Out-of-frame Inter-chr p13.3 q11.1 AGC:DMPK Seq+ 63708 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNG12-DIRAS3 GNG12 chr1 68299027 - DIRAS3 chr1 68513045 - Exonic hg19 LUAD TCGA-69-7760-01A 3 3 5'UTR-5'UTR Intra-chr p31.3 p31.3 Tumor suppressor gene Seq+ 63709 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNG12-DIRAS3 GNG12 chr1 68299027 - DIRAS3 chr1 68513045 - Exonic hg19 STAD TCGA-BR-A4QI-01A 3 38 5'UTR-5'UTR Intra-chr p31.3 p31.3 Tumor suppressor gene Seq+ 63710 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNG12-DIRAS3 GNG12 chr1 68243141 - DIRAS3 chr1 68513045 - Exonic hg19 PRAD TCGA-EJ-A8FP-01A 2 1 5'UTR-5'UTR Intra-chr p31.3 p31.3 Tumor suppressor gene Seq+ 63711 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNG12-PLXNA2 GNG12 chr1 68299027 - PLXNA2 chr1 208257925 - Exonic hg19 SARC TCGA-VT-A80J-01A 3 2 5'UTR-CDS Intra-chr p31.3 q32.2 Seq+ 63712 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNG12-PLXNA2 GNG12 chr1 68299027 - PLXNA2 chr1 208257925 - Exonic hg19 SARC TCGA-VT-A80J-02A 4 1 5'UTR-CDS Intra-chr p31.3 q32.2 Seq+ 63713 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNG12-SPATA6 GNG12 chr1 68243141 - SPATA6 chr1 48851021 - Exonic hg19 PAAD TCGA-2J-AABF-01A 6 6 5'UTR-CDS Intra-chr p31.3 p33 Seq+ 63714 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNG4-SH3D19 GNG4 chr1 235812962 - SH3D19 chr4 152086848 - Exonic hg19 PRAD TCGA-EJ-7781-01A 8 11 5'UTR-CDS Inter-chr q31.3 Seq+ 63715 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNG7-ARHGEF18 GNG7 chr19 2646222 - ARHGEF18 chr19 7516035 + Exonic hg19 BRCA TCGA-AC-A5XU-01A 4 2 5'UTR-CDS Intra-chr p13.3 p13.2 63716 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNG7-PLA2G2A GNG7 chr19 2646222 - PLA2G2A chr1 20305372 - Exonic hg19 SKCM TCGA-EB-A42Z-01A 23 4 5'UTR-5'UTR Inter-chr p13.3 p36.13 Tumor suppressor gene Seq+ 63717 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNG7-PSMD1 GNG7 chr19 2555147 - PSMD1 chr2 232018278 + Exonic hg19 ACC TCGA-OR-A5JP-01A 7 3 5'UTR-5'UTR Inter-chr p13.3 q37.1 63718 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNG7-TACC3 GNG7 chr19 2646222 - TACC3 chr4 1741429 + Exonic hg19 LGG TCGA-FG-7643-01A 20 6 5'UTR-CDS Inter-chr p13.3 p16.3 63719 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNL1-REPS1 GNL1 chr6 30520244 - REPS1 chr6 139242261 - Exonic hg19 SARC TCGA-DX-A3U5-01A 10 8 Out-of-frame Intra-chr q24.1 Seq+ 63720 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNL2-DNAH3 GNL2 chr1 38061360 - DNAH3 chr16 21128660 - Exonic hg19 BRCA TCGA-AR-A0TS-01A 34 22 Out-of-frame Inter-chr p34.3 p12.3 Seq+ 63721 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNL3-BAP1 GNL3 chr3 52725645 - BAP1 chr3 52442093 - Exonic hg19 MESO TCGA-UD-AABY-01A 6 1 Out-of-frame Intra-chr p21.1 p21.1 Oncogene Tumor suppressor gene 63722 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNL3-CLCN3 GNL3 chr3 52728508 - CLCN3 chr4 170623929 + Exonic hg19 UCEC TCGA-E6-A2P8-01A 2 2 Out-of-frame Inter-chr p21.1 q33 63723 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNL3-MANF GNL3 chr3 52720121 - MANF chr3 51423639 + Exonic hg19 LUSC TCGA-33-AASB-01A 30 29 In-Frame Intra-chr p21.1 p21.2 Seq+ 63724 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNL3L-GABRB3 GNL3L chrX 54559018 - GABRB3 chr15 26828561 - Exonic hg19 SARC TCGA-UE-A6QU-01A 65 18 Out-of-frame Inter-chr p11.22 q12 Seq+ 63725 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNL3L-XAGE3 GNL3L chrX 54556852 - XAGE3 chrX 52896172 - Exonic hg19 CESC TCGA-ZJ-A8QR-01A 2 1 5'UTR-5'UTR Intra-chr p11.22 p11.22 Seq+ 63726 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNPAT-CAPN9 GNPAT chr1 231386889 - CAPN9 chr1 230923268 + Exonic hg19 BLCA TCGA-PQ-A6FN-01A 25 27 In-Frame Intra-chr q42.2 q42.2 Seq+ 63727 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNPAT-PCNXL2 GNPAT chr1 231403649 - PCNXL2 chr1 233353930 - Exonic hg19 PRAD TCGA-EJ-5499-01A 3 3 Out-of-frame Intra-chr q42.2 63728 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNPAT-TRIM67 GNPAT chr1 231377202 - TRIM67 chr1 231335894 + Exonic hg19 LIHC TCGA-G3-AAV7-01A 6 11 In-Frame Intra-chr q42.2 q42.2 Seq+ 63729 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNPAT-TRIM67 GNPAT chr1 231386889 - TRIM67 chr1 231344693 + Exonic hg19 BLCA TCGA-HQ-A2OE-01A 7 5 Out-of-frame Intra-chr q42.2 q42.2 Seq+ 63730 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNPDA1-RNGTT GNPDA1 chr5 141384497 - RNGTT chr6 89616159 - Exonic hg19 PRAD TCGA-EJ-7327-01A 3 2 Out-of-frame Inter-chr q31.3 q15 Seq+ 63731 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNPDA2-GRID2 GNPDA2 chr4 44728491 - GRID2 chr4 94316758 + Exonic hg19 BRCA TCGA-AR-A2LR-01A 7 2 5'UTR-CDS Intra-chr p12 q22.1 Seq+ 63732 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNPTAB-CCDC60 GNPTAB chr12 102224337 - CCDC60 chr12 119926564 + Exonic hg19 SARC TCGA-DX-AB2O-01A 16 9 Out-of-frame Intra-chr q23.2 q24.23 Seq+ 63733 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNPTAB-TRHDE GNPTAB chr12 102224337 - TRHDE chr12 72680461 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 33 21 Out-of-frame Intra-chr q23.2 q21.1 Seq+ 63734 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNPTG-RAB40C GNPTG chr16 1402307 - RAB40C chr16 675432 + Exonic hg19 UCS TCGA-N5-A4RA-01A 4 2 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 63735 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNRHR2-S100A13 GNRHR2 chr1 145515189 - S100A13 chr1 153591514 - Exonic hg19 HNSC TCGA-TN-A7HJ-01A 9 8 3'UTR-CDS Intra-chr q21.1 q21.3 Seq+ 63736 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNS-NUP107 GNS chr12 65130784 - NUP107 chr12 69103018 + Exonic hg19 SARC TCGA-DX-A1KW-01A 182 149 In-Frame Intra-chr q14.3 q15 Seq+ 63737 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNS-RASSF3 GNS chr12 65136921 - RASSF3 chr12 65078567 + Exonic hg19 SARC TCGA-DX-A23T-01A 79 312 In-Frame Intra-chr q14.3 q14.2 Tumor suppressor gene Seq+ 63738 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GNS-SLC16A7 GNS chr12 65146478 - SLC16A7 chr12 60173204 + Exonic hg19 SARC TCGA-DX-A1KU-01A 4 3 Out-of-frame Intra-chr q14.3 q14.1 Seq+ 63739 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLGA1-WDR38 GOLGA1 chr9 127660828 - WDR38 chr9 127616484 + Exonic hg19 KIRC TCGA-DV-5576-01A 7 6 In-Frame Intra-chr q33.3 q33.3 Seq+ 63740 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLGA3-CHFR GOLGA3 chr12 133357384 - CHFR chr12 133419669 - Exonic hg19 LUSC TCGA-33-6738-01A 4 1 Out-of-frame Intra-chr q24.33 q24.33 Tumor suppressor gene 63741 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLGA3-RTN2 GOLGA3 chr12 133353220 - RTN2 chr19 45998397 - Exonic hg19 BLCA TCGA-XF-A9T3-01A 2 3 Out-of-frame Inter-chr q24.33 q13.32 Seq+ 63742 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLGA4-FAM135B GOLGA4 chr3 37292975 - FAM135B chr8 139278085 - Exonic hg19 SARC TCGA-DX-A7EU-01A 2 3 Out-of-frame Inter-chr p22.2 q24.23 Seq+ 63743 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLGA4-HSPA8 GOLGA4 chr3 37292975 - HSPA8 chr11 122930976 - Exonic hg19 BRCA TCGA-GM-A2DF-01A 10 9 In-Frame Inter-chr p22.2 q24.1 Seq+ 63744 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLGA4-MLH1 GOLGA4 chr3 37370584 - MLH1 chr3 37089010 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 8 12 In-Frame Intra-chr p22.2 p22.2 Oncogene Tumor suppressor gene Seq+ 63745 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLGA4-MLH1 GOLGA4 chr3 37360685 - MLH1 chr3 37061801 + Exonic hg19 STAD TCGA-BR-A4QI-01A 3 56 Out-of-frame Intra-chr p22.2 p22.2 Oncogene Tumor suppressor gene Seq+ 63746 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLGA4-MLH1 GOLGA4 chr3 37343823 - MLH1 chr3 37058997 + Exonic hg19 PRAD TCGA-EJ-A46G-01A 14 11 In-Frame Intra-chr p22.2 p22.2 Oncogene Tumor suppressor gene Seq+ 63747 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLGA4-RRM1 GOLGA4 chr3 37292975 - RRM1 chr11 4150304 + Exonic hg19 BLCA TCGA-G2-AA3F-01A 39 31 CDS-3'UTR Inter-chr p22.2 p15.4 Oncogene Seq+ 63748 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLGA5-RIN3 GOLGA5 chr14 93299692 - RIN3 chr14 93107583 + Exonic hg19 LUAD TCGA-78-7220-01A 8 3 Out-of-frame Intra-chr q32.12 q32.12 Seq+ 63749 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLGA5-RIN3 GOLGA5 chr14 93275864 - RIN3 chr14 93022096 + Exonic hg19 SKCM TCGA-EB-A85J-01A 26 12 In-Frame Intra-chr q32.12 q32.12 Seq+ 63750 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLGA8B-ACTC1 GOLGA8B chr15 34875717 - ACTC1 chr15 35087031 - Exonic hg19 ESCA TCGA-L5-A4OS-01A 2 3 3'UTR-5'UTR Intra-chr q14 q14 63751 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLGB1-CCDC58 GOLGB1 chr3 121409517 - CCDC58 chr3 122090647 - Exonic hg19 BRCA TCGA-EW-A3U0-01A 5 3 In-Frame Intra-chr q13.33 q21.1 Seq+ 63752 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLGB1-GK5 GOLGB1 chr3 121468479 - GK5 chr3 141934534 - Exonic hg19 PRAD TCGA-EJ-A65F-01A 9 1 5'UTR-CDS Intra-chr q13.33 q23 63753 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLGB1-IQCB1 GOLGB1 chr3 121468479 - IQCB1 chr3 121491560 - Exonic hg19 ESCA TCGA-LN-A5U7-01A 27 42 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 63754 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLGB1-IQCB1 GOLGB1 chr3 121400534 - IQCB1 chr3 121509062 - Exonic hg19 BRCA TCGA-OL-A66P-01A 3 1 In-Frame Intra-chr q13.33 q13.33 Seq+ 63755 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLIM4-MECOM GOLIM4 chr3 167742314 - MECOM chr3 168861620 - Exonic hg19 SKCM TCGA-W3-A828-06A 34 11 In-Frame Intra-chr q26.2 q26.2 Transcription factor Seq+ 63756 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLIM4-NCEH1 GOLIM4 chr3 167812887 - NCEH1 chr3 172365904 - Exonic hg19 LUAD TCGA-38-4630-01A 2 3 Out-of-frame Intra-chr q26.2 q26.31 Seq+ 63757 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLIM4-PRDX1 GOLIM4 chr3 167759180 - PRDX1 chr1 45977086 - Exonic hg19 READ TCGA-EI-6885-01A 288 278 Out-of-frame Inter-chr q26.2 p34.1 Seq+ 63758 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLIM4-RNF175 GOLIM4 chr3 167812887 - RNF175 chr4 154636814 - Exonic hg19 LUSC TCGA-52-7622-01A 36 22 Out-of-frame Inter-chr q26.2 q31.3 Seq+ 63759 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLIM4-SLC40A1 GOLIM4 chr3 167742314 - SLC40A1 chr2 190440046 - Exonic hg19 HNSC TCGA-CV-7261-01A 39 44 In-Frame Inter-chr q26.2 q32.2 Seq+ 63760 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLPH3-IKZF3 GOLPH3 chr5 32173916 - IKZF3 chr17 37944627 - Exonic hg19 ESCA TCGA-L5-A8NI-01A 5 62 Out-of-frame Inter-chr p13.3 q21.1 Tumor suppressor gene Transcription factor Seq+ 63761 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLPH3-LRTM1 GOLPH3 chr5 32135678 - LRTM1 chr3 54952919 - Exonic hg19 LUSC TCGA-18-3416-01A 3 2 In-Frame Inter-chr p13.3 p14.3 Seq+ 63762 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLPH3-SLC6A19 GOLPH3 chr5 32173916 - SLC6A19 chr5 1219018 + Exonic hg19 PRAD TCGA-EJ-5496-01A 9 6 In-Frame Intra-chr p13.3 p15.33 Seq+ 63763 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLPH3L-ARNT GOLPH3L chr1 150667132 - ARNT chr1 150790506 - Exonic hg19 LIHC TCGA-GJ-A6C0-01A 3 1 Out-of-frame Intra-chr q21.3 q21.3 Oncogene Transcription factor 63764 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLPH3L-HORMAD1 GOLPH3L chr1 150669468 - HORMAD1 chr1 150681437 - Exonic hg19 OV TCGA-13-0905-01B 19 30 5'UTR-CDS Intra-chr q21.3 q21.3 Seq+ 63765 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLPH3L-HORMAD1 GOLPH3L chr1 150667132 - HORMAD1 chr1 150675869 - Exonic hg19 PAAD TCGA-IB-7652-01A 35 17 In-Frame Intra-chr q21.3 q21.3 Seq+ 63766 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOLT1B-IAPP GOLT1B chr12 21661495 - IAPP chr12 21526271 + Exonic hg19 LUSC TCGA-77-A5GH-01A 6 2 CDS-5'UTR Intra-chr p12.1 p12.1 Seq+ 63767 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GON4L-ARHGEF2 GON4L chr1 155746186 - ARHGEF2 chr1 155939091 - Exonic hg19 CESC TCGA-HM-A6W2-01A 3 5 In-Frame Intra-chr q22 q22 Seq+ 63768 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GON4L-ARHGEF2 GON4L chr1 155823067 - ARHGEF2 chr1 155922619 - Exonic hg19 BLCA TCGA-XF-A9T3-01A 2 1 In-Frame Intra-chr q22 q22 Seq+ 63769 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GON4L-C1orf61 GON4L chr1 155753777 - C1orf61 chr1 156374393 - Exonic hg19 LUSC TCGA-LA-A7SW-01A 117 89 Out-of-frame Intra-chr q22 q22 63770 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GON4L-CCT3 GON4L chr1 155726749 - CCT3 chr1 156279094 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 130 79 In-Frame Intra-chr q22 q22 Seq+ 63771 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GON4L-IQGAP3 GON4L chr1 155823067 - IQGAP3 chr1 156510708 - Exonic hg19 BRCA TCGA-EW-A1OW-01A 58 14 In-Frame Intra-chr q22 q22 Seq+ 63772 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GON4L-MED27 GON4L chr1 155740858 - MED27 chr9 134769379 - Exonic hg19 SKCM TCGA-FS-A1Z4-06A 2 4 In-Frame Inter-chr q22 q34.13 Seq+ 63773 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GON4L-MEX3A GON4L chr1 155823067 - MEX3A chr1 156047473 - Exonic hg19 LUSC TCGA-NC-A5HJ-01A 5 4 In-Frame Intra-chr q22 q22 Seq+ 63774 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GON4L-MTX1 GON4L chr1 155785596 - MTX1 chr1 155180137 + Exonic hg19 PRAD TCGA-J4-AATZ-01A 4 3 In-Frame Intra-chr q22 q22 63775 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GON4L-PIPOX GON4L chr1 155791265 - PIPOX chr17 27371877 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 28 9 In-Frame Inter-chr q22 q11.2 Seq+ 63776 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GON4L-RIT1 GON4L chr1 155829095 - RIT1 chr1 155874595 - Exonic hg19 UCEC TCGA-PG-A5BC-01A 4 2 5'UTR-CDS Intra-chr q22 q22 Seq+ 63777 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GON4L-SERPINB7 GON4L chr1 155783425 - SERPINB7 chr18 61449589 + Exonic hg19 CESC TCGA-C5-A1MK-01A 4 4 CDS-5'UTR Inter-chr q22 q21.33 Seq+ 63778 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOPC-ABLIM1 GOPC chr6 117900063 - ABLIM1 chr10 116251637 - Exonic hg19 BRCA TCGA-BH-A18R-01A 56 48 In-Frame Inter-chr q22.1 q25.3 Seq+ 63779 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GORASP2-AC007405.7 GORASP2 chr2 171785913 - AC007405.7 chr2 171649373 + Exonic hg19 LUAD TCGA-69-7979-01A 10 6 Out-of-frame Intra-chr q31.1 63780 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GORASP2-WIPF1 GORASP2 chr2 171785913 - WIPF1 chr2 175450339 - Exonic hg19 KIRC TCGA-B0-5095-01A 22 4 5'UTR-5'UTR Intra-chr q31.1 q31.1 Seq+ 63781 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOSR1-AP2B1 GOSR1 chr17 28819771 - AP2B1 chr17 34009714 + Exonic hg19 LUAD TCGA-55-6971-01A 9 15 In-Frame Intra-chr q11.2 q12 Seq+ 63782 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOSR1-CPD GOSR1 chr17 28811788 - CPD chr17 28788198 + Exonic hg19 ESCA TCGA-2H-A9GJ-01A 14 75 In-Frame Intra-chr q11.2 q11.2 Tumor suppressor gene Seq+ 63783 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOSR1-CPD GOSR1 chr17 28811788 - CPD chr17 28788895 + Exonic hg19 LIHC TCGA-BC-A8YO-01A 72 47 In-Frame Intra-chr q11.2 q11.2 Tumor suppressor gene Seq+ 63784 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOSR1-DGAT2 GOSR1 chr17 28819771 - DGAT2 chr11 75507373 + Exonic hg19 UCEC TCGA-5B-A90C-01A 2 5 Out-of-frame Inter-chr q11.2 q13.5 Seq+ 63785 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOSR1-JUP GOSR1 chr17 28811788 - JUP chr17 39921319 - Exonic hg19 LGG TCGA-CS-6665-01A 2 1 In-Frame Intra-chr q11.2 q21.2 Tumor suppressor gene 63786 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GOT2-MMP2 GOT2 chr16 58752100 - MMP2 chr16 55516821 + Exonic hg19 SKCM TCGA-EB-A82B-01A 4 6 In-Frame Intra-chr q21 q12.2 Oncogene Seq+ 63787 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPAA1-GRINA GPAA1 chr8 145139233 - GRINA chr8 145065368 + Exonic hg19 READ TCGA-AG-3731-01A 81 110 CDS-5'UTR Intra-chr q24.3 q24.3 Seq+ 63788 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPAM-VTI1A GPAM chr10 113942552 - VTI1A chr10 114286846 + Exonic hg19 COAD TCGA-G4-6625-01A 2 2 5'UTR-CDS Intra-chr q25.2 q25.2 63789 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPATCH1-FCGRT GPATCH1 chr19 33610023 - FCGRT chr19 50027764 + Exonic hg19 STAD TCGA-HU-A4HD-01A 4 53 In-Frame Intra-chr q13.11 q13.33 Seq+ 63790 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPATCH3-C1orf172 GPATCH3 chr1 27219880 - C1orf172 chr1 27278903 - Exonic hg19 LIHC TCGA-DD-AADV-01A 7 8 CDS-5'UTR Intra-chr p36.11 63791 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPATCH8-COMTD1 GPATCH8 chr17 42580694 - COMTD1 chr10 76994501 - Exonic hg19 PRAD TCGA-TK-A8OK-01A 5 3 Out-of-frame Inter-chr q21.31 q22.2 Seq+ 63792 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPATCH8-KRT25 GPATCH8 chr17 42512433 - KRT25 chr17 38904638 - Exonic hg19 PRAD TCGA-G9-6356-01A 15 6 Out-of-frame Intra-chr q21.31 q21.2 Seq+ 63793 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPATCH8-METTL16 GPATCH8 chr17 42512433 - METTL16 chr17 2381179 - Exonic hg19 SARC TCGA-N1-A6IA-01A 6 9 Out-of-frame Intra-chr q21.31 p13.3 Seq+ 63794 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPATCH8-MYO1D GPATCH8 chr17 42580694 - MYO1D chr17 30821933 - Exonic hg19 OV TCGA-24-1424-01A 6 9 Out-of-frame Intra-chr q21.31 q11.2 Seq+ 63795 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPATCH8-NPLOC4 GPATCH8 chr17 42512433 - NPLOC4 chr17 79596831 - Exonic hg19 BRCA TCGA-A8-A07B-01A 19 6 In-Frame Intra-chr q21.31 q25.3 Seq+ 63796 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPATCH8-STAC2 GPATCH8 chr17 42541840 - STAC2 chr17 37374426 - Exonic hg19 BLCA TCGA-HQ-A2OF-01A 6 7 Out-of-frame Intra-chr q21.31 q12 Seq+ 63797 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPATCH8-ZMYM4 GPATCH8 chr17 42501717 - ZMYM4 chr1 35851043 + Exonic hg19 KIRC TCGA-B8-5551-01A 8 6 In-Frame Inter-chr q21.31 p34.3 Seq+ 63798 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPBP1-BDNF GPBP1 chr5 56531859 - BDNF chr11 27680132 - Exonic hg19 LUAD TCGA-MP-A4TK-01A 14 3 Out-of-frame Inter-chr q11.2 Transcription factor p14.1 Seq+ 63799 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPBP1-MTRR GPBP1 chr5 56527148 - MTRR chr5 7889208 + Exonic hg19 PRAD TCGA-EJ-7327-01A 44 35 In-Frame Intra-chr q11.2 Transcription factor p15.31 Oncogene Seq+ 63800 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPBP1L1-PVR GPBP1L1 chr1 46124700 - PVR chr19 45153081 + Exonic hg19 LGG TCGA-TM-A7C3-01A 17 5 Out-of-frame Inter-chr p34.1 Transcription factor q13.31 Seq+ 63801 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPBP1L1-TRAPPC9 GPBP1L1 chr1 46152084 - TRAPPC9 chr8 141407844 - Exonic hg19 BRCA TCGA-C8-A8HQ-01A 10 4 5'UTR-CDS Inter-chr p34.1 Transcription factor q24.3 Seq+ 63802 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPBP1L1-ZMPSTE24 GPBP1L1 chr1 46120215 - ZMPSTE24 chr1 40733458 + Exonic hg19 PRAD TCGA-CH-5788-01A 2 4 In-Frame Intra-chr p34.1 Transcription factor p34.2 Seq+ 63803 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPC1-ANKFN1 GPC1 chr2 241375501 - ANKFN1 chr17 54428127 + Exonic hg19 LUSC TCGA-66-2789-01A 8 16 Out-of-frame Inter-chr q37.3 q22 Seq+ 63804 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPC1-MFN1 GPC1 chr2 241407493 - MFN1 chr3 179096011 + Exonic hg19 LUSC TCGA-46-6025-01A 2 2 Out-of-frame Inter-chr q37.3 q26.33 63805 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPC1-XRCC6BP1 GPC1 chr2 241375501 - XRCC6BP1 chr12 58339411 + Exonic hg19 SARC TCGA-DX-A48N-01A 15 7 In-Frame Inter-chr q37.3 63806 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPC4-GPC3 GPC4 chrX 132548834 - GPC3 chrX 132670321 - Exonic hg19 TGCT TCGA-2G-AAKD-01A 21 15 In-Frame Intra-chr q26.2 q26.2 Tumor suppressor gene 63807 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPC4-GPC3 GPC4 chrX 132548834 - GPC3 chrX 132670321 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 31 31 In-Frame Intra-chr q26.2 q26.2 Tumor suppressor gene 63808 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPC6-GPC5 GPC6 chr13 93879869 - GPC5 chr13 93518535 + Exonic hg19 KIRC TCGA-B0-4706-01A 10 11 In-Frame Intra-chr q31.3 q31.3 Tumor suppressor gene 63809 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPC6-GPC5 GPC6 chr13 93879869 - GPC5 chr13 93518535 + Exonic hg19 LIHC TCGA-CC-A3M9-01A 30 16 In-Frame Intra-chr q31.3 q31.3 Tumor suppressor gene 63810 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPC6-GPC5 GPC6 chr13 93879869 - GPC5 chr13 93518535 + Exonic hg19 HNSC TCGA-CQ-6224-01A 9 4 In-Frame Intra-chr q31.3 q31.3 Tumor suppressor gene 63811 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPC6-GPC5 GPC6 chr13 93879869 - GPC5 chr13 93518535 + Exonic hg19 PRAD TCGA-HC-A76W-01A 4 1 In-Frame Intra-chr q31.3 q31.3 Tumor suppressor gene 63812 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPC6-GPC5 GPC6 chr13 93879869 - GPC5 chr13 93518535 + Exonic hg19 LIHC TCGA-MI-A75E-01A 20 5 In-Frame Intra-chr q31.3 q31.3 Tumor suppressor gene 63813 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPC6-GPC5 GPC6 chr13 94482798 - GPC5 chr13 93518535 + Exonic hg19 UCS TCGA-N5-A59E-01A 2 7 Out-of-frame Intra-chr q31.3 q31.3 Tumor suppressor gene 63814 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPC6-GPC5 GPC6 chr13 93879869 - GPC5 chr13 92797083 + Exonic hg19 CHOL TCGA-W5-AA2Q-01A 5 4 Out-of-frame Intra-chr q31.3 q31.3 Tumor suppressor gene 63815 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPD1L-STT3B GPD1L chr3 32148250 - STT3B chr3 31667446 + Exonic hg19 BLCA TCGA-H4-A2HO-01A 13 3 Out-of-frame Intra-chr p22.3 p23 63816 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPD2-R3HDM1 GPD2 chr2 157293025 - R3HDM1 chr2 136360070 + Exonic hg19 LGG TCGA-FG-5963-02A 7 1 5'UTR-5'UTR Intra-chr q24.1 q21.3 63817 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPHN-DCAF5 GPHN chr14 67147903 - DCAF5 chr14 69558604 - Exonic hg19 LUSC TCGA-85-A53L-01A 8 6 In-Frame Intra-chr q23.3 q24.1 Seq+ 63818 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPHN-PRKCH GPHN chr14 66975309 - PRKCH chr14 61857943 + Exonic hg19 SKCM TCGA-FW-A3I3-06A 5 2 Out-of-frame Intra-chr q23.3 q23.1 Seq+ 63819 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPHN-PRKD1 GPHN chr14 67147903 - PRKD1 chr14 30135414 - Exonic hg19 LGG TCGA-TQ-A7RW-01A 2 1 Out-of-frame Intra-chr q23.3 q12 63820 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPHN-SLC8A3 GPHN chr14 67589094 - SLC8A3 chr14 70527656 - Exonic hg19 PRAD TCGA-HC-7232-01A 13 11 In-Frame Intra-chr q23.3 q24.2 Seq+ 63821 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPI-UTRN GPI chr19 34893318 - UTRN chr6 144665237 + Exonic hg19 KIRP TCGA-GL-6846-01A 2 12 Out-of-frame Inter-chr q24.2 63822 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPLD1-BANK1 GPLD1 chr6 24486303 - BANK1 chr4 102776192 + Exonic hg19 PRAD TCGA-HC-7209-01A 37 10 Out-of-frame Inter-chr p22.3 q24 Seq+ 63823 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPLD1-FAM65B GPLD1 chr6 24486303 - FAM65B chr6 24876045 - Exonic hg19 LIHC TCGA-2Y-A9H9-01A 30 29 CDS-5'UTR Intra-chr p22.3 Seq+ 63824 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPLD1-TDP2 GPLD1 chr6 24433415 - TDP2 chr6 24651297 - Exonic hg19 GBM TCGA-76-4929-01A 2 6 In-Frame Intra-chr p22.3 p22.3 Seq+ 63825 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPM6B-CHD1 GPM6B chrX 13789575 - CHD1 chr5 98219587 - Exonic hg19 LGG TCGA-HT-7611-01A 2 2 Out-of-frame Inter-chr p22.2 q21.1 Tumor suppressor gene 63826 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPNMB-IRF6 GPNMB chr7 23314253 - IRF6 chr1 209979465 - Exonic hg19 LUSC TCGA-98-8021-01A 2 1 Out-of-frame Inter-chr p15.3 q32.2 Transcription factor 63827 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPNMB-KLHL7 GPNMB chr7 23293931 - KLHL7 chr7 23195610 + Exonic hg19 CESC TCGA-DS-A7WI-01A 27 31 Out-of-frame Intra-chr p15.3 p15.3 Seq+ 63828 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPNMB-NUPL2 GPNMB chr7 23293931 - NUPL2 chr7 23224689 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 55 39 In-Frame Intra-chr p15.3 p15.3 Seq+ 63829 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR107-GARNL3 GPR107 chr9 132861811 - GARNL3 chr9 130155362 + Exonic hg19 PRAD TCGA-J9-A8CL-01A 32 29 Out-of-frame Intra-chr q34.11 q33.3 Seq+ 63830 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR107-VPS13A GPR107 chr9 132854660 - VPS13A chr9 79946926 + Exonic hg19 BRCA TCGA-AN-A0AL-01A 5 5 Out-of-frame Intra-chr q34.11 q21.2 Seq+ 63831 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR110-MEP1A GPR110 chr6 47009927 - MEP1A chr6 46800811 + Exonic hg19 BLCA TCGA-GV-A3JZ-01A 8 3 5'UTR-CDS Intra-chr p12.3 Seq+ 63832 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR110-TNFRSF21 GPR110 chr6 46989694 - TNFRSF21 chr6 47254331 - Exonic hg19 BLCA TCGA-DK-AA6S-01A 181 199 In-Frame Intra-chr p12.3 Seq+ 63833 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR110-TNFRSF21 GPR110 chr6 47009927 - TNFRSF21 chr6 47202634 - Exonic hg19 BLCA TCGA-DK-AA6U-01A 17 11 5'UTR-CDS Intra-chr p12.3 Seq+ 63834 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR110-TNFRSF21 GPR110 chr6 46976681 - TNFRSF21 chr6 47221257 - Exonic hg19 LIHC TCGA-ED-A82E-01A 10 6 Out-of-frame Intra-chr p12.3 Seq+ 63835 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR110-TNFRSF21 GPR110 chr6 46984353 - TNFRSF21 chr6 47221257 - Exonic hg19 BLCA TCGA-FD-A62P-01A 24 7 In-Frame Intra-chr p12.3 Seq+ 63836 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR110-TRERF1 GPR110 chr6 46993590 - TRERF1 chr6 42204149 - Exonic hg19 OV TCGA-13-1505-01A 3 1 Out-of-frame Intra-chr p21.1 Transcription factor Seq+ 63837 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR116-MEP1A GPR116 chr6 46832779 - MEP1A chr6 46802315 + Exonic hg19 LUAD TCGA-91-6840-01A 85 93 In-Frame Intra-chr p12.3 Seq+ 63838 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR126-CLSTN2 GPR126 chr6 142630781 - CLSTN2 chr3 139894793 + Exonic hg19 BRCA TCGA-E9-A1RE-01A 14 3 In-Frame Inter-chr q23 63839 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR126-VTA1 GPR126 chr6 142623468 - VTA1 chr6 142487365 + Exonic hg19 LIHC TCGA-CC-5263-01A 14 11 Out-of-frame Intra-chr q24.1 Seq+ 63840 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR126-VTA1 GPR126 chr6 142731056 - VTA1 chr6 142510563 + Exonic hg19 LIHC TCGA-DD-AAW3-01A 5 4 Out-of-frame Intra-chr q24.1 Seq+ 63841 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR137-RARRES3 GPR137 chr11 64056193 - RARRES3 chr11 63313621 + Exonic hg19 UCS TCGA-NF-A4WX-01A 30 1 Out-of-frame Intra-chr q13.1 q12.3 Tumor suppressor gene Seq+ 63842 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR137C-FERMT2 GPR137C chr14 53020309 - FERMT2 chr14 53331571 - Exonic hg19 BRCA TCGA-A2-A0EY-01A 12 10 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 63843 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR141-ONECUT1 GPR141 chr7 37725186 - ONECUT1 chr15 53050044 - Exonic hg19 LAML TCGA-AB-2904-03A 2 2 5'UTR-CDS Inter-chr p14.1 q21.3 Tumor suppressor gene Transcription factor 63844 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR146-DTNBP1 GPR146 chr7 1084294 - DTNBP1 chr6 15533626 - Exonic hg19 LUSC TCGA-46-3769-01A 2 6 5'UTR-CDS Inter-chr p22.3 p22.3 Seq+ 63845 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR156-EPB41L2 GPR156 chr3 120003876 - EPB41L2 chr6 131277639 - Exonic hg19 LGG TCGA-DU-6402-01A 2 2 5'UTR-5'UTR Inter-chr q13.33 q23.2 63846 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR157-GON4L GPR157 chr1 9188704 - GON4L chr1 155755165 - Exonic hg19 BRCA TCGA-E9-A229-01A 4 2 Out-of-frame Intra-chr p36.22 q22 Seq+ 63847 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR158-KIAA1217 GPR158 chr10 25510086 - KIAA1217 chr10 24802188 + Exonic hg19 SKCM TCGA-EE-A20I-06A 191 152 In-Frame Intra-chr p12.1 p12.2 Seq+ 63848 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR158-MYO16 GPR158 chr10 25465251 - MYO16 chr13 109644724 + Exonic hg19 BRCA TCGA-C8-A1HO-01A 65 94 In-Frame Inter-chr p12.1 Seq+ 63849 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR160-PDCD10 GPR160 chr3 169756831 - PDCD10 chr3 167405104 - Exonic hg19 PRAD TCGA-VP-A876-01A 9 5 5'UTR-CDS Intra-chr q26.2 q26.1 Seq+ 63850 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR160-SEC62 GPR160 chr3 169797685 - SEC62 chr3 169693396 + Exonic hg19 LUAD TCGA-44-4112-01A 11 1 5'UTR-CDS Intra-chr q26.2 q26.2 Seq+ 63851 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR161-EFTUD1 GPR161 chr1 168105248 - EFTUD1 chr15 82523312 - Exonic hg19 SARC TCGA-DX-A6BG-01A 2 2 5'UTR-CDS Inter-chr q24.2 63852 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR173-TGM7 GPR173 chrX 53078666 - TGM7 chr15 43572149 - Exonic hg19 UCEC TCGA-A5-A7WK-01A 3 1 5'UTR-CDS Inter-chr p11.22 q15.3 Oncogene 63853 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR180-GPC6 GPR180 chr13 95257803 - GPC6 chr13 95034668 + Exonic hg19 SKCM TCGA-FS-A1ZQ-06A 14 8 Out-of-frame Intra-chr q32.1 q31.3 Seq+ 63854 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR35-ANKMY1 GPR35 chr2 241558448 - ANKMY1 chr2 241468926 - Exonic hg19 PAAD TCGA-2J-AABR-01A 2 6 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 63855 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR35-ANKMY1 GPR35 chr2 241558448 - ANKMY1 chr2 241468926 - Exonic hg19 PAAD TCGA-FB-AAPZ-01A 3 3 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 63856 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR35-MELK GPR35 chr2 241558448 - MELK chr9 36642994 + Exonic hg19 BRCA TCGA-AO-A03V-01A 2 1 Out-of-frame Inter-chr q37.3 p13.2 CAMK:CAMKL Seq+ 63857 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR35-TIA1 GPR35 chr2 241546029 - TIA1 chr2 70444126 - Exonic hg19 UCS TCGA-N8-A4PP-01A 7 4 5'UTR-CDS Intra-chr q37.3 p13.3 63858 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR39-ZNF285 GPR39 chr2 133175471 - ZNF285 chr19 44901421 - Exonic hg19 LUAD TCGA-55-8205-01A 3 3 CDS-5'UTR Inter-chr q21.2 q13.31 Transcription factor 63859 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR98-ATR GPR98 chr5 89924649 - ATR chr3 142286996 - Exonic hg19 BRCA TCGA-AO-A0JA-01A 2 5 CDS-3'UTR Inter-chr q23 Atypical:PIKK Oncogene Tumor suppressor gene Seq+ 63860 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR98-CLPTM1L GPR98 chr5 90281339 - CLPTM1L chr5 1318568 - Exonic hg19 ACC TCGA-OR-A5JV-01A 193 92 In-Frame Intra-chr p15.33 Seq+ 63861 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPR98-POLR3G GPR98 chr5 89938858 - POLR3G chr5 89797723 + Exonic hg19 BRCA TCGA-B6-A0I8-01A 4 2 Out-of-frame Intra-chr q14.3 Seq+ 63862 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPRC5A-NRG1 GPRC5A chr12 13044598 - NRG1 chr8 32453346 + Exonic hg19 STAD TCGA-B7-A5TN-01A 38 57 5'UTR-CDS Inter-chr p13.1 Tumor suppressor gene p12 Seq+ 63863 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPRC5B-C16orf96 GPRC5B chr16 19873159 - C16orf96 chr16 4621562 + Exonic hg19 BRCA TCGA-S3-AA0Z-01A 17 7 In-Frame Intra-chr p12.3 p13.3 Seq+ 63864 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPRC5C-CLDN4 GPRC5C chr17 72443568 - CLDN4 chr7 73245193 + Exonic hg19 PRAD TCGA-CH-5766-01A 2 3 3'UTR-5'UTR Inter-chr q25.1 q11.23 63865 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPRIN1-TM2D1 GPRIN1 chr5 176037000 - TM2D1 chr1 62166697 - Exonic hg19 SARC TCGA-DX-AB3A-01A 6 16 5'UTR-CDS Inter-chr q35.2 p31.3 Seq+ 63866 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPS1-BLVRA GPS1 chr17 80009840 - BLVRA chr7 43840064 + Exonic hg19 UCEC TCGA-AJ-A3BF-01A 32 65 Out-of-frame Inter-chr q25.3 p13 Seq+ 63867 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPS1-STRA13 GPS1 chr17 80009840 - STRA13 chr17 79977785 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 13 15 In-Frame Intra-chr q25.3 Seq+ 63868 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPSM1-NUP214 GPSM1 chr9 139251002 - NUP214 chr9 134002911 + Exonic hg19 LGG TCGA-HT-7873-01B 16 3 In-Frame Intra-chr q34.3 q34.13 Oncogene Seq+ 63869 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPT2-HSD17B2 GPT2 chr16 46956328 - HSD17B2 chr16 82104547 + Exonic hg19 LUAD TCGA-MP-A4TF-01A 6 3 Out-of-frame Intra-chr q11.2 q23.3 Seq+ 63870 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPX3-CHD4 GPX3 chr5 150408515 - CHD4 chr12 6710696 - Exonic hg19 THCA TCGA-DJ-A4V2-01A 2 1 3'UTR-CDS Inter-chr q33.1 Tumor suppressor gene p13.31 63871 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPX3-CHD4 GPX3 chr5 150408515 - CHD4 chr12 6710696 - Exonic hg19 THCA TCGA-FY-A3W9-01A 2 6 3'UTR-CDS Inter-chr q33.1 Tumor suppressor gene p13.31 63872 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPX3-CLCN3 GPX3 chr5 150408548 - CLCN3 chr4 170623929 + Exonic hg19 THCA TCGA-EM-A4FK-01A 2 122 Out-of-frame Inter-chr q33.1 Tumor suppressor gene q33 63873 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPX3-EIF2AK2 GPX3 chr5 150408554 - EIF2AK2 chr2 37342384 - Exonic hg19 KIRP TCGA-5P-A9KC-01A 2 14 Out-of-frame Inter-chr q33.1 Tumor suppressor gene p22.2 63874 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPX3-SEC63 GPX3 chr5 150408548 - SEC63 chr6 108214782 - Exonic hg19 THCA TCGA-BJ-A2N8-01A 2 28 Out-of-frame Inter-chr q33.1 Tumor suppressor gene q21 63875 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPX3-SEC63 GPX3 chr5 150408548 - SEC63 chr6 108214782 - Exonic hg19 THCA TCGA-EM-A22L-01A 2 13 Out-of-frame Inter-chr q33.1 Tumor suppressor gene q21 63876 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPX4-SEC63 GPX4 chr19 1106786 - SEC63 chr6 108214782 - Exonic hg19 THCA TCGA-EM-A22K-01A 2 1 Out-of-frame Inter-chr p13.3 q21 63877 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GPX8-TTLL1 GPX8 chr5 54456071 - TTLL1 chr22 43455533 - Exonic hg19 LUAD TCGA-93-8067-01A 4 2 In-Frame Inter-chr q11.2 q13.2 Seq+ 63878 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRAMD1A-KRTDAP GRAMD1A chr19 35500233 - KRTDAP chr19 35978661 - Exonic hg19 LUAD TCGA-L9-A8F4-01A 6 8 In-Frame Intra-chr q13.11 q13.12 Seq+ 63879 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRAMD1A-RAB3IP GRAMD1A chr19 35491390 - RAB3IP chr12 70193989 + Exonic hg19 SARC TCGA-DX-A7EI-01A 16 27 Out-of-frame Inter-chr q13.11 q15 Seq+ 63880 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRAMD4-LRRC48 GRAMD4 chr22 47071449 - LRRC48 chr17 17896079 + Exonic hg19 UCS TCGA-N8-A4PL-01A 3 4 In-Frame Inter-chr q13.31 63881 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRAP2-BRD1 GRAP2 chr22 40365537 - BRD1 chr22 50192767 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 49 28 In-Frame Intra-chr q13.1 q13.33 Seq+ 63882 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRB10-CSTF3 GRB10 chr7 50771518 - CSTF3 chr11 33108687 - Exonic hg19 OV TCGA-61-1917-01A 2 5 Out-of-frame Inter-chr p12.1 p13 Seq+ 63883 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRB10-EEPD1 GRB10 chr7 50737419 - EEPD1 chr7 36278594 + Exonic hg19 GBM TCGA-14-0736-02A 2 4 Out-of-frame Intra-chr p12.1 p14.2 Seq+ 63884 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRB10-MAD1L1 GRB10 chr7 50823584 - MAD1L1 chr7 2188873 - Exonic hg19 LUAD TCGA-05-4415-01A 17 11 5'UTR-CDS Intra-chr p12.1 p22.3 Tumor suppressor gene Seq+ 63885 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRB10-PIP4K2C GRB10 chr7 50737419 - PIP4K2C chr12 57987808 + Exonic hg19 SARC TCGA-DX-AB3A-01A 8 7 In-Frame Inter-chr p12.1 q13.3 Seq+ 63886 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRB10-SCMH1 GRB10 chr7 50682467 - SCMH1 chr1 41494398 - Exonic hg19 SARC TCGA-DX-A6YS-01A 3 9 Out-of-frame Inter-chr p12.1 p34.2 Transcription factor Seq+ 63887 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRB10-SLC2A13 GRB10 chr7 50771518 - SLC2A13 chr12 40154054 - Exonic hg19 BRCA TCGA-E9-A22G-01A 6 6 In-Frame Inter-chr p12.1 q12 Seq+ 63888 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRB10-STEAP1B GRB10 chr7 50823584 - STEAP1B chr7 22534505 - Exonic hg19 BLCA TCGA-CU-A0YN-01A 3 1 5'UTR-5'UTR Intra-chr p12.1 p15.3 Seq+ 63889 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRB2-PADI1 GRB2 chr17 73317740 - PADI1 chr1 17570505 + Exonic hg19 ESCA TCGA-L5-A4OS-01A 4 12 In-Frame Inter-chr q25.1 Seq+ 63890 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRB2-TCTEX1D2 GRB2 chr17 73389632 - TCTEX1D2 chr3 196022940 - Exonic hg19 LUSC TCGA-46-6025-01A 16 22 Out-of-frame Inter-chr q25.1 q29 Seq+ 63891 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRB2-VMP1 GRB2 chr17 73389632 - VMP1 chr17 57842332 + Exonic hg19 SKCM TCGA-D9-A1JW-06A 42 23 In-Frame Intra-chr q25.1 q23.1 Seq+ 63892 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRB7-C17orf37 GRB7 chr17 37898709 - C17orf37 chr17 37886544 - Exonic hg19 ESCA TCGA-2H-A9GF-01A 97 507 Out-of-frame Intra-chr q12 63893 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRB7-CD300E GRB7 chr17 37901237 - CD300E chr17 72610172 - Exonic hg19 BLCA TCGA-XF-A9SK-01A 2 1 Out-of-frame Intra-chr q12 q25.1 Seq+ 63894 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRB7-CDK12 GRB7 chr17 37902455 - CDK12 chr17 37680927 + Exonic hg19 STAD TCGA-CG-4449-01A 20 11 Out-of-frame Intra-chr q12 q12 Oncogene Seq+ 63895 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRB7-ERBB2 GRB7 chr17 37894386 - ERBB2 chr17 37844949 + Exonic hg19 BLCA TCGA-GU-AATP-01A 6 5 5'UTR-5'UTR Intra-chr q12 q12 Oncogene Seq+ 63896 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRB7-ERBB2 GRB7 chr17 37898709 - ERBB2 chr17 37863243 + Exonic hg19 CESC TCGA-LP-A5U3-01A 888 65 Out-of-frame Intra-chr q12 q12 Oncogene Seq+ 63897 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRB7-IKZF3 GRB7 chr17 37894386 - IKZF3 chr17 37949186 - Exonic hg19 STAD TCGA-D7-8573-01A 2 26 5'UTR-CDS Intra-chr q12 q21.1 Tumor suppressor gene Transcription factor Seq+ 63898 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRB7-KRT27 GRB7 chr17 37900916 - KRT27 chr17 38933984 - Exonic hg19 STAD TCGA-D7-8573-01A 50 222 In-Frame Intra-chr q12 q21.2 Seq+ 63899 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRB7-PGAP3 GRB7 chr17 37899307 - PGAP3 chr17 37842272 - Exonic hg19 BRCA TCGA-BH-A202-01A 158 126 In-Frame Intra-chr q12 q12 Oncogene Seq+ 63900 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRB7-PLXDC1 GRB7 chr17 37900460 - PLXDC1 chr17 37224212 - Exonic hg19 BLCA TCGA-CU-A0YR-01A 8 4 In-Frame Intra-chr q12 q12 Seq+ 63901 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GREB1-PDE1A GREB1 chr2 11742668 - PDE1A chr2 183387113 - Exonic hg19 PRAD TCGA-V1-A8MF-01A 2 1 In-Frame Intra-chr p25.1 q32.1 63902 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GREB1L-CEP192 GREB1L chr18 18822354 - CEP192 chr18 13100304 + Exonic hg19 BRCA TCGA-A8-A06Q-01A 2 6 5'UTR-CDS Intra-chr q11.1 p11.21 Seq+ 63903 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRHL2-C10orf58 GRHL2 chr8 102505017 - C10orf58 chr10 82191742 + Exonic hg19 BRCA TCGA-AN-A0AJ-01A 45 96 Out-of-frame Inter-chr q22.3 Transcription factor 63904 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRHL2-C22orf40 GRHL2 chr8 102505017 - C22orf40 chr22 46641135 - Exonic hg19 HNSC TCGA-CV-6948-01A 8 1 Out-of-frame Inter-chr q22.3 Transcription factor 63905 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRHL2-COL14A1 GRHL2 chr8 102505017 - COL14A1 chr8 121312971 + Exonic hg19 UCEC TCGA-AX-A2H4-01A 2 1 Out-of-frame Intra-chr q22.3 Transcription factor q24.12 63906 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRHL2-CRMP1 GRHL2 chr8 102505017 - CRMP1 chr4 5830395 - Exonic hg19 HNSC TCGA-IQ-A61H-01A 158 122 Out-of-frame Inter-chr q22.3 Transcription factor p16.2 Seq+ 63907 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRHL2-ERG GRHL2 chr8 102571040 - ERG chr21 39795483 - Exonic hg19 PRAD TCGA-V1-A9OT-01A 2 4 Out-of-frame Inter-chr q22.3 Transcription factor q22.2 Oncogene Transcription factor Seq+ 63908 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRHL2-FAM49A GRHL2 chr8 102661727 - FAM49A chr2 16769397 - Exonic hg19 BLCA TCGA-BL-A0C8-01A 7 4 CDS-5'UTR Inter-chr q22.3 Transcription factor p24.2 Seq+ 63909 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRHL2-KCNRG GRHL2 chr8 102505017 - KCNRG chr13 50594350 + Exonic hg19 HNSC TCGA-CV-7253-01A 2 1 In-Frame Inter-chr q22.3 Transcription factor q14.2 Tumor suppressor gene Seq+ 63910 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRHL2-MATN2 GRHL2 chr8 102661727 - MATN2 chr8 98991114 + Exonic hg19 COAD TCGA-AZ-6608-01A 3 3 Out-of-frame Intra-chr q22.3 Transcription factor q22.1 Seq+ 63911 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRHL2-NCALD GRHL2 chr8 102611379 - NCALD chr8 102731876 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 11 13 CDS-5'UTR Intra-chr q22.3 Transcription factor q22.3 Seq+ 63912 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRHL2-NCALD GRHL2 chr8 102631925 - NCALD chr8 102928086 - Exonic hg19 PRAD TCGA-YL-A8SP-01B 22 16 CDS-5'UTR Intra-chr q22.3 Transcription factor q22.3 Seq+ 63913 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRHL2-PAGE3 GRHL2 chr8 102571040 - PAGE3 chrX 55289792 - Exonic hg19 BRCA TCGA-A2-A0EQ-01A 8 6 CDS-3'UTR Inter-chr q22.3 Transcription factor p11.21 Seq+ 63914 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRHL2-POLR2K GRHL2 chr8 102555664 - POLR2K chr8 101163575 + Exonic hg19 STAD TCGA-CG-4449-01A 11 16 CDS-5'UTR Intra-chr q22.3 Transcription factor q22.2 Seq+ 63915 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRHL2-SPAG1 GRHL2 chr8 102661727 - SPAG1 chr8 101174507 + Exonic hg19 HNSC TCGA-IQ-A61H-01A 15 2 CDS-5'UTR Intra-chr q22.3 Transcription factor q22.2 Seq+ 63916 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRHL2-TRAPPC9 GRHL2 chr8 102611379 - TRAPPC9 chr8 140922544 - Exonic hg19 BRCA TCGA-C8-A12U-01A 9 11 Out-of-frame Intra-chr q22.3 Transcription factor q24.3 Seq+ 63917 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRHL2-TRIM13 GRHL2 chr8 102505017 - TRIM13 chr13 50571803 + Exonic hg19 HNSC TCGA-CV-7253-01A 16 11 CDS-5'UTR Inter-chr q22.3 Transcription factor q14.2 Tumor suppressor gene Seq+ 63918 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRHL2-TSPAN14 GRHL2 chr8 102505017 - TSPAN14 chr10 82248973 + Exonic hg19 BRCA TCGA-AN-A0AJ-01A 7 5 CDS-5'UTR Inter-chr q22.3 Transcription factor q23.1 Seq+ 63919 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRHL2-ZFHX4 GRHL2 chr8 102505017 - ZFHX4 chr8 77616278 + Exonic hg19 BRCA TCGA-AR-A0TV-01A 2 2 CDS-5'UTR Intra-chr q22.3 Transcription factor q21.13 Transcription factor Seq+ 63920 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRIA1-RAD17 GRIA1 chr5 153085627 - RAD17 chr5 68677728 + Exonic hg19 SKCM TCGA-EE-A2M7-06A 8 2 Out-of-frame Intra-chr q33.2 Seq+ 63921 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRIA4-NAALAD2 GRIA4 chr11 105732934 - NAALAD2 chr11 89906992 + Exonic hg19 LGG TCGA-DB-5277-01A 77 39 In-Frame Intra-chr q22.3 q14.3 Seq+ 63922 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRID1-AFAP1L2 GRID1 chr10 88123698 - AFAP1L2 chr10 116100490 - Exonic hg19 SARC TCGA-DX-A6YR-01A 5 2 In-Frame Intra-chr q23.2 q25.3 Tumor suppressor gene Seq+ 63923 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRID1-CXCL12 GRID1 chr10 87675943 - CXCL12 chr10 44793345 - Exonic hg19 SKCM TCGA-ER-A19L-06A 6 2 CDS-3'UTR Intra-chr q23.2 q11.21 Tumor suppressor gene 63924 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRID1-GLUD1 GRID1 chr10 88123698 - GLUD1 chr10 88836413 - Exonic hg19 BLCA TCGA-K4-A6MB-01A 4 13 In-Frame Intra-chr q23.2 q23.2 Seq+ 63925 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRID1-HECTD2 GRID1 chr10 88123698 - HECTD2 chr10 93185038 + Exonic hg19 SKCM TCGA-EB-A42Z-01A 7 8 Out-of-frame Intra-chr q23.2 q23.32 Seq+ 63926 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRID1-PGPEP1L GRID1 chr10 87898576 - PGPEP1L chr15 99514387 - Exonic hg19 BRCA TCGA-AO-A03P-01A 17 7 In-Frame Inter-chr q23.2 q26.3 Seq+ 63927 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRIK2-CDKAL1 GRIK2 chr6 101847268 - CDKAL1 chr6 21065279 + Exonic hg19 BRCA TCGA-OL-A5DA-01A 5 6 Out-of-frame Intra-chr q16.3 p22.3 Seq+ 63928 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRIK2-EYS GRIK2 chr6 101847268 - EYS chr6 65767620 - Exonic hg19 LGG TCGA-TM-A7CF-01A 2 2 In-Frame Intra-chr q16.3 q12 63929 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRIK2-GPC1 GRIK2 chr6 101847268 - GPC1 chr2 241398447 + Exonic hg19 SKCM TCGA-D3-A2JP-06A 4 6 In-Frame Inter-chr q16.3 q37.3 Seq+ 63930 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRIK2-MANEA GRIK2 chr6 102134228 - MANEA chr6 96034278 + Exonic hg19 SKCM TCGA-ER-A197-06A 2 1 CDS-5'UTR Intra-chr q16.3 q16.1 63931 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRIK2-RNF217 GRIK2 chr6 102376507 - RNF217 chr6 125366357 + Exonic hg19 SARC TCGA-HB-A3YV-01A 36 49 In-Frame Intra-chr q16.3 q22.31 Seq+ 63932 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRIK2-WASF1 GRIK2 chr6 102134228 - WASF1 chr6 110448832 - Exonic hg19 SARC TCGA-HB-A3YV-01A 8 10 CDS-5'UTR Intra-chr q16.3 q21 Seq+ 63933 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRIK4-TMPRSS4 GRIK4 chr11 120776202 - TMPRSS4 chr11 117965537 + Exonic hg19 BRCA TCGA-EW-A1P1-01A 2 1 In-Frame Intra-chr q23.3 q23.3 63934 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRIN2A-MTHFD1L GRIN2A chr16 10031816 - MTHFD1L chr6 151413603 + Exonic hg19 SARC TCGA-SI-A71O-01A 3 2 Out-of-frame Inter-chr p13.2 Tumor suppressor gene q25.1 63935 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRIN2A-RASSF8 GRIN2A chr16 10273855 - RASSF8 chr12 26208212 + Exonic hg19 LGG TCGA-TM-A84I-01A 17 7 CDS-5'UTR Inter-chr p13.2 Tumor suppressor gene p12.1 Tumor suppressor gene Seq+ 63936 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRINA-MUC6 GRINA chr8 145067583 - MUC6 chr11 1018770 - Exonic hg19 PRAD TCGA-CH-5766-01A 2 1 3'UTR-CDS Inter-chr q24.3 63937 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRINL1A-LPHN1 GRINL1A chr15 57896553 - LPHN1 chr19 14263249 - Exonic hg19 BRCA TCGA-D8-A1XK-01A 8 4 Out-of-frame Inter-chr 63938 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRIP1-DAZL GRIP1 chr12 66770954 - DAZL chr3 16633655 - Exonic hg19 SARC TCGA-DX-A1KY-01A 34 12 In-Frame Inter-chr q14.3 p24.3 Seq+ 63939 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRIP1-HSD17B6 GRIP1 chr12 66856704 - HSD17B6 chr12 57156982 + Exonic hg19 SARC TCGA-DX-AB2G-01A 5 3 CDS-5'UTR Intra-chr q14.3 q13.3 63940 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRIP1-NR2E3 GRIP1 chr12 66932858 - NR2E3 chr15 72099357 + Exonic hg19 PCPG TCGA-WB-A81W-01A 2 2 CDS-5'UTR Inter-chr q14.3 q23 Transcription factor Seq+ 63941 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRIP1-TMEM5 GRIP1 chr12 66990627 - TMEM5 chr12 64199014 + Exonic hg19 SARC TCGA-HB-A3YV-01A 29 10 Out-of-frame Intra-chr q14.3 q14.2 Seq+ 63942 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRIP1-XCL1 GRIP1 chr12 66932858 - XCL1 chr1 168550290 + Exonic hg19 LUSC TCGA-85-8354-01A 2 2 Out-of-frame Inter-chr q14.3 q24.2 Seq+ 63943 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRIPAP1-SYP GRIPAP1 chrX 48834717 - SYP chrX 49045735 - Exonic hg19 KIRP TCGA-HE-7130-01A 6 9 CDS-3'UTR Intra-chr p11.23 p11.23 Seq+ 63944 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRK5-PDZD8 GRK5 chr10 121156284 - PDZD8 chr10 119078485 - Exonic hg19 HNSC TCGA-BA-4075-01A 5 1 Out-of-frame Intra-chr q26.11 q26.11 Seq+ 63945 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRK5-SUMF1 GRK5 chr10 121191039 - SUMF1 chr3 4110429 - Exonic hg19 SARC TCGA-DX-A48R-01A 13 7 Out-of-frame Inter-chr q26.11 p26.1 Seq+ 63946 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRK6-DBN1 GRK6 chr5 176862122 - DBN1 chr5 176886269 - Exonic hg19 STAD TCGA-CD-A4MH-01A 8 124 In-Frame Intra-chr q35.3 q35.3 Seq+ 63947 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRM1-CNOT2 GRM1 chr6 146720835 - CNOT2 chr12 70713078 + Exonic hg19 SARC TCGA-DX-A3U5-01A 3 9 Out-of-frame Inter-chr q24.3 q15 Seq+ 63948 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRN-CDKN3 GRN chr17 42430470 - CDKN3 chr14 54877897 + Exonic hg19 BLCA TCGA-FD-A3SS-01A 2 29 Out-of-frame Inter-chr q21.31 q22.2 63949 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRN-CLCN3 GRN chr17 42430470 - CLCN3 chr4 170623929 + Exonic hg19 HNSC TCGA-CV-7090-01A 2 5 Out-of-frame Inter-chr q21.31 q33 63950 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRN-COL11A1 GRN chr17 42430470 - COL11A1 chr1 103491508 - Exonic hg19 HNSC TCGA-CQ-A4CI-01A 2 1 3'UTR-CDS Inter-chr q21.31 p21.1 63951 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRN-ERBB3 GRN chr17 42430470 - ERBB3 chr12 56492035 + Exonic hg19 UCEC TCGA-AX-A3G6-01A 2 7 Out-of-frame Inter-chr q21.31 q13.2 Oncogene 63952 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRN-FAR1 GRN chr17 42430470 - FAR1 chr11 13744912 + Exonic hg19 BLCA TCGA-G2-A3VY-01A 3 5 Out-of-frame Inter-chr q21.31 p15.3 63953 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRN-NCALD GRN chr17 42430470 - NCALD chr8 102813898 - Exonic hg19 BRCA TCGA-D8-A1X6-01A 2 5 Out-of-frame Inter-chr q21.31 q22.3 63954 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRN-PLAT GRN chr17 42430470 - PLAT chr8 42051245 - Exonic hg19 CESC TCGA-HM-A4S6-01A 2 39 Out-of-frame Inter-chr q21.31 p11.21 63955 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRN-ZC3H3 GRN chr17 42428168 - ZC3H3 chr8 144567117 - Exonic hg19 BLCA TCGA-S5-A6DX-01A 99 73 Out-of-frame Inter-chr q21.31 Seq+ 63956 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRSF1-ELFN2 GRSF1 chr4 71698024 - ELFN2 chr22 37772036 - Exonic hg19 COAD TCGA-RU-A8FL-01A 12 10 CDS-5'UTR Inter-chr q13.3 q13.1 Seq+ 63957 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRTP1-C21orf56 GRTP1 chr13 114009638 - C21orf56 chr21 47581981 - Exonic hg19 SARC TCGA-IF-A4AK-01A 14 4 In-Frame Inter-chr q34 63958 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GRTP1-COL4A2 GRTP1 chr13 113999178 - COL4A2 chr13 111154015 + Exonic hg19 LUAD TCGA-69-7979-01A 16 11 In-Frame Intra-chr q34 q34 Seq+ 63959 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSK3A-CNFN GSK3A chr19 42736209 - CNFN chr19 42893191 - Exonic hg19 LIHC TCGA-2V-A95S-01A 18 16 CDS-5'UTR Intra-chr q13.2 CMGC:GSK q13.2 Seq+ 63960 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSK3A-ZNF564 GSK3A chr19 42744107 - ZNF564 chr19 12639510 - Exonic hg19 PRAD TCGA-KK-A8IH-01A 5 1 In-Frame Intra-chr q13.2 CMGC:GSK p13.2 Transcription factor Seq+ 63961 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSK3B-ATP11B GSK3B chr3 119720893 - ATP11B chr3 182631649 + Exonic hg19 PRAD TCGA-G9-6333-01A 11 10 In-Frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q26.33 Oncogene Seq+ 63962 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSK3B-BEST3 GSK3B chr3 119720893 - BEST3 chr12 70049593 - Exonic hg19 SARC TCGA-FX-A3NK-01A 5 2 Out-of-frame Inter-chr q13.33 CMGC:GSK Tumor suppressor gene q15 63963 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSK3B-C3orf15 GSK3B chr3 119812194 - C3orf15 chr3 119426251 + Exonic hg19 BRCA TCGA-GI-A2C9-01A 3 3 Out-of-frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene 63964 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSK3B-COL8A1 GSK3B chr3 119642220 - COL8A1 chr3 99509524 + Exonic hg19 LUAD TCGA-38-4631-01A 4 2 CDS-5'UTR Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q12.1 63965 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSK3B-FSTL1 GSK3B chr3 119720893 - FSTL1 chr3 120134874 - Exonic hg19 BRCA TCGA-E2-A14P-01A 27 24 In-Frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q13.33 Seq+ 63966 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSK3B-GPR156 GSK3B chr3 119562102 - GPR156 chr3 119963325 - Exonic hg19 BRCA TCGA-BH-A0W7-01A 3 4 CDS-5'UTR Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q13.33 63967 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSK3B-LSAMP GSK3B chr3 119624602 - LSAMP chr3 116163802 - Exonic hg19 BRCA TCGA-A2-A04Y-01A 2 2 In-Frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q13.31 Tumor suppressor gene Seq+ 63968 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSK3B-LSAMP GSK3B chr3 119666115 - LSAMP chr3 115738487 - Exonic hg19 PRAD TCGA-HC-A4ZV-01A 4 3 Out-of-frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q13.31 Tumor suppressor gene Seq+ 63969 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSK3B-PLA1A GSK3B chr3 119624602 - PLA1A chr3 119347548 + Exonic hg19 PRAD TCGA-XK-AAJA-01A 4 2 Out-of-frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q13.33 Seq+ 63970 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSK3B-RASSF2 GSK3B chr3 119812194 - RASSF2 chr20 4781708 - Exonic hg19 UCEC TCGA-AJ-A3EJ-01A 7 5 CDS-5'UTR Inter-chr q13.33 CMGC:GSK Tumor suppressor gene p13 Tumor suppressor gene Seq+ 63971 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSK3B-SEMA5B GSK3B chr3 119582266 - SEMA5B chr3 122680148 - Exonic hg19 PRAD TCGA-ZG-A9KY-01A 25 19 In-Frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q21.1 Seq+ 63972 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSK3B-TSC22D2 GSK3B chr3 119624602 - TSC22D2 chr3 150174863 + Exonic hg19 PRAD TCGA-FC-A4JI-01A 4 2 Out-of-frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q25.1 Seq+ 63973 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSK3B-WNK2 GSK3B chr3 119812194 - WNK2 chr9 96070610 + Exonic hg19 PCPG TCGA-P7-A5NX-01A 5 4 In-Frame Inter-chr q13.33 CMGC:GSK Tumor suppressor gene q22.31 Tumor suppressor gene Seq+ 63974 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSN-AKAP13 GSN chr9 124095120 - AKAP13 chr15 86122161 + Exonic hg19 THCA TCGA-E8-A417-01A 2 1 3'UTR-CDS Inter-chr q33.2 Tumor suppressor gene q25.3 63975 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSN-CTNNB1 GSN chr9 124095016 - CTNNB1 chr3 41240996 + Exonic hg19 THCA TCGA-EL-A3CN-01A 2 1 Out-of-frame Inter-chr q33.2 Tumor suppressor gene p22.1 Oncogene 63976 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSN-FAR1 GSN chr9 124095120 - FAR1 chr11 13744912 + Exonic hg19 LUAD TCGA-50-7109-01A 2 2 Out-of-frame Inter-chr q33.2 Tumor suppressor gene p15.3 63977 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSN-HLA-DPB1 GSN chr9 124095016 - HLA-DPB1 chr6 33043760 + Exonic hg19 THCA TCGA-H2-A26U-01A 2 1 Out-of-frame Inter-chr q33.2 Tumor suppressor gene 63978 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSN-HLA-F GSN chr9 124095016 - HLA-F chr6 29691219 + Exonic hg19 LUAD TCGA-78-7542-01A 2 1 Out-of-frame Inter-chr q33.2 Tumor suppressor gene 63979 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSN-HSPA8 GSN chr9 124095016 - HSPA8 chr11 122933938 - Exonic hg19 BLCA TCGA-FD-A3SM-01A 2 1 Out-of-frame Inter-chr q33.2 Tumor suppressor gene q24.1 63980 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSN-TRA2A GSN chr9 124095016 - TRA2A chr7 23571595 - Exonic hg19 PRAD TCGA-EJ-7794-01A 2 1 Out-of-frame Inter-chr q33.2 Tumor suppressor gene p15.3 63981 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSN-UTRN GSN chr9 124095120 - UTRN chr6 144665237 + Exonic hg19 LUSC TCGA-21-1076-01A 2 2 Out-of-frame Inter-chr q33.2 Tumor suppressor gene q24.2 63982 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSN-UVRAG GSN chr9 124095120 - UVRAG chr11 75694431 + Exonic hg19 BRCA TCGA-A7-A4SC-01A 2 6 3'UTR-CDS Inter-chr q33.2 Tumor suppressor gene q13.5 Tumor suppressor gene 63983 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSR-CSMD1 GSR chr8 30541605 - CSMD1 chr8 2887035 - Exonic hg19 KIRP TCGA-J7-8537-01A 74 76 In-Frame Intra-chr p12 p23.2 Tumor suppressor gene Seq+ 63984 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSR-STMN2 GSR chr8 30557598 - STMN2 chr8 80549037 + Exonic hg19 PRAD TCGA-KK-A7AV-01A 4 7 Out-of-frame Intra-chr p12 q21.13 Seq+ 63985 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSS-ACSS2 GSS chr20 33543530 - ACSS2 chr20 33513501 + Exonic hg19 LUAD TCGA-44-3919-01A 2 1 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 63986 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSTA4-NADSYN1 GSTA4 chr6 52847372 - NADSYN1 chr11 71208529 + Exonic hg19 BRCA TCGA-A2-A0T4-01A 5 5 In-Frame Inter-chr p12.2 q13.4 Seq+ 63987 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSTP1-ARFGEF2 GSTP1 chr11 67354121 - ARFGEF2 chr20 47615777 + Exonic hg19 SKCM TCGA-EE-A2GM-06B 2 18 Out-of-frame Inter-chr q13.2 Tumor suppressor gene q13.13 63988 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSTP1-ATP5G3 GSTP1 chr11 67354121 - ATP5G3 chr2 176049335 - Exonic hg19 HNSC TCGA-D6-6517-01A 2 20 Out-of-frame Inter-chr q13.2 Tumor suppressor gene q31.1 63989 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSTP1-ELP4 GSTP1 chr11 67354121 - ELP4 chr11 31653764 + Exonic hg19 BLCA TCGA-2F-A9KT-01A 9 2 3'UTR-CDS Intra-chr q13.2 Tumor suppressor gene p13 Seq+ 63990 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GSTP1-SF3B2 GSTP1 chr11 67354121 - SF3B2 chr11 65836145 + Exonic hg19 SKCM TCGA-EB-A1NK-01A 2 7 3'UTR-CDS Intra-chr q13.2 Tumor suppressor gene q13.1 63991 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2A1-KIAA0391 GTF2A1 chr14 81682757 - KIAA0391 chr14 35649876 + Exonic hg19 LUAD TCGA-78-8660-01A 15 17 In-Frame Intra-chr q31.1 q13.2 Seq+ 63992 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2A1-POMT2 GTF2A1 chr14 81686833 - POMT2 chr14 77769286 - Exonic hg19 ACC TCGA-OR-A5JL-01A 30 17 Out-of-frame Intra-chr q31.1 q24.3 Seq+ 63993 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2B-BPI GTF2B chr1 89357166 - BPI chr20 36959450 + Exonic hg19 BRCA TCGA-AR-A254-01A 59 3 In-Frame Inter-chr p22.2 Transcription factor q11.23 Seq+ 63994 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2B-CCBL2 GTF2B chr1 89352944 - CCBL2 chr1 89401928 - Exonic hg19 BRCA TCGA-BH-A1FD-01A 46 32 Out-of-frame Intra-chr p22.2 Transcription factor Seq+ 63995 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2B-ODF2L GTF2B chr1 89357166 - ODF2L chr1 86826219 - Exonic hg19 PRAD TCGA-Y6-A9XI-01A 20 9 Out-of-frame Intra-chr p22.2 Transcription factor p22.3 Seq+ 63996 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2E2-ACE GTF2E2 chr8 30510950 - ACE chr17 61561691 + Exonic hg19 LUAD TCGA-95-7948-01A 6 5 Out-of-frame Inter-chr p12 q23.3 Seq+ 63997 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2E2-EIF4EBP1 GTF2E2 chr8 30510950 - EIF4EBP1 chr8 37914599 + Exonic hg19 BRCA TCGA-S3-AA12-01A 43 62 In-Frame Intra-chr p12 p11.23 Seq+ 63998 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2E2-FBXO16 GTF2E2 chr8 30492549 - FBXO16 chr8 28286253 - Exonic hg19 PRAD TCGA-VP-A87D-01A 11 8 Out-of-frame Intra-chr p12 p21.1 Seq+ 63999 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2E2-FUT10 GTF2E2 chr8 30510950 - FUT10 chr8 33251773 - Exonic hg19 BRCA TCGA-S3-AA12-01A 6 3 Out-of-frame Intra-chr p12 p12 Seq+ 64000 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2E2-GSR GTF2E2 chr8 30510950 - GSR chr8 30550572 - Exonic hg19 LUAD TCGA-50-6592-01A 28 14 Out-of-frame Intra-chr p12 p12 Seq+ 64001 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2E2-HEATR4 GTF2E2 chr8 30510950 - HEATR4 chr14 73980938 - Exonic hg19 PRAD TCGA-HC-7081-01A 2 1 In-Frame Inter-chr p12 q24.3 64002 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2E2-NARS2 GTF2E2 chr8 30510950 - NARS2 chr11 78204241 - Exonic hg19 BRCA TCGA-A2-A0ES-01A 2 4 Out-of-frame Inter-chr p12 q14.1 64003 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2E2-RBPMS GTF2E2 chr8 30510950 - RBPMS chr8 30402011 + Exonic hg19 LUAD TCGA-05-4427-01A 27 23 In-Frame Intra-chr p12 p12 Seq+ 64004 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2F1-ACP5 GTF2F1 chr19 6383322 - ACP5 chr19 11686067 - Exonic hg19 SKCM TCGA-EB-A550-01A 64 47 Out-of-frame Intra-chr p13.3 p13.2 Seq+ 64005 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2F2-CTIF GTF2F2 chr13 45781640 - CTIF chr18 46284290 + Exonic hg19 LUAD TCGA-44-7667-01A 36 28 In-Frame Inter-chr q14.12 Seq+ 64006 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2F2-GPC5 GTF2F2 chr13 45694856 - GPC5 chr13 92797083 + Exonic hg19 LIHC TCGA-ZP-A9CZ-01A 26 20 In-Frame Intra-chr q14.12 q31.3 Tumor suppressor gene Seq+ 64007 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2F2-KIAA1704 GTF2F2 chr13 45725966 - KIAA1704 chr13 45578440 + Exonic hg19 LUSC TCGA-56-A4BX-01A 12 6 In-Frame Intra-chr q14.12 64008 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2F2-KIAA1704 GTF2F2 chr13 45827105 - KIAA1704 chr13 45589087 + Exonic hg19 LIHC TCGA-DD-AADA-01A 5 5 In-Frame Intra-chr q14.12 64009 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2F2-NBEA GTF2F2 chr13 45781640 - NBEA chr13 35923245 + Exonic hg19 BRCA TCGA-BH-A0B7-01A 12 18 In-Frame Intra-chr q14.12 q13.3 Seq+ 64010 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2F2-RSF1 GTF2F2 chr13 45725966 - RSF1 chr11 77413540 - Exonic hg19 LUSC TCGA-56-A4BX-01A 6 5 In-Frame Inter-chr q14.12 q14.1 Seq+ 64011 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2F2-S100A3 GTF2F2 chr13 45694856 - S100A3 chr1 153520966 - Exonic hg19 BLCA TCGA-DK-A1AD-01A 55 14 CDS-5'UTR Inter-chr q14.12 q21.3 Seq+ 64012 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2F2-S100A4 GTF2F2 chr13 45694856 - S100A4 chr1 153517285 - Exonic hg19 BLCA TCGA-DK-A1AD-01A 272 137 CDS-5'UTR Inter-chr q14.12 q21.3 Seq+ 64013 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2H1-HPS5 GTF2H1 chr11 18344287 - HPS5 chr11 18318531 - Exonic hg19 BRCA TCGA-A8-A06U-01A 34 18 5'UTR-CDS Intra-chr p15.1 p15.1 Seq+ 64014 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2H3-NCOR2 GTF2H3 chr12 124130108 - NCOR2 chr12 124862930 - Exonic hg19 SKCM TCGA-D3-A3C1-06A 9 10 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 64015 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2H3-NUAK1 GTF2H3 chr12 124118419 - NUAK1 chr12 106466621 - Exonic hg19 SARC TCGA-PC-A5DN-01A 3 7 Out-of-frame Intra-chr q24.31 q23.3 Tumor suppressor gene Seq+ 64016 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2H3-PGC GTF2H3 chr12 124123890 - PGC chr6 41705566 - Exonic hg19 GBM TCGA-06-0129-01A 4 6 In-Frame Inter-chr q24.31 p21.1 Seq+ 64017 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2I-FLAD1 GTF2I chr7 74072394 - FLAD1 chr1 154960581 + Exonic hg19 ACC TCGA-OR-A5J7-01A 17 24 5'UTR-CDS Inter-chr q11.23 Transcription factor q21.3 Seq+ 64018 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2IRD1-ALK GTF2IRD1 chr7 73935627 - ALK chr2 29446394 - Exonic hg19 THCA TCGA-EL-A4KD-01A 14 23 In-Frame Inter-chr q11.23 Transcription factor p23.1 TK:ALK Oncogene Seq+ 64019 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2IRD1-CLIP2 GTF2IRD1 chr7 73868506 - CLIP2 chr7 73790217 + Exonic hg19 UCS TCGA-N9-A4Q1-01A 14 2 5'UTR-CDS Intra-chr q11.23 Transcription factor q11.23 64020 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2IRD1-DUS3L GTF2IRD1 chr7 73868506 - DUS3L chr19 5790346 - Exonic hg19 ACC TCGA-OR-A5J7-01A 4 1 5'UTR-CDS Inter-chr q11.23 Transcription factor p13.3 64021 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2IRD1-RHBDD2 GTF2IRD1 chr7 73938484 - RHBDD2 chr7 75510683 + Exonic hg19 COAD TCGA-CM-6677-01A 3 1 CDS-5'UTR Intra-chr q11.23 Transcription factor q11.23 Seq+ 64022 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2IRD1-SHFM1 GTF2IRD1 chr7 73868506 - SHFM1 chr7 96251955 - Exonic hg19 HNSC TCGA-MT-A51X-01A 2 1 Out-of-frame Intra-chr q11.23 Transcription factor 64023 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF2IRD1-ZAN GTF2IRD1 chr7 73953090 - ZAN chr7 100389588 + Exonic hg19 LUAD TCGA-49-AAR0-01A 3 7 Out-of-frame Intra-chr q11.23 Transcription factor q22.1 Seq+ 64024 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF3C2-WDR35 GTF3C2 chr2 27564815 - WDR35 chr2 20160375 - Exonic hg19 BRCA TCGA-A8-A0A7-01A 6 2 In-Frame Intra-chr p23.3 p24.1 64025 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF3C5-PHF2 GTF3C5 chr9 135930196 - PHF2 chr9 96435867 + Exonic hg19 SKCM TCGA-GN-A265-06A 2 3 Out-of-frame Intra-chr q34.13 q22.31 Seq+ 64026 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTF3C6-LACE1 GTF3C6 chr6 111280455 - LACE1 chr6 108831415 + Exonic hg19 BRCA TCGA-E2-A14S-01A 38 53 In-Frame Intra-chr q21 Seq+ 64027 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTPBP1-CDC42EP1 GTPBP1 chr22 39102152 - CDC42EP1 chr22 37962079 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 6 5 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 64028 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTPBP1-TOMM22 GTPBP1 chr22 39124166 - TOMM22 chr22 39078884 + Exonic hg19 LUAD TCGA-44-2659-01A 7 14 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 64029 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTPBP2-HIST1H2BJ GTPBP2 chr6 43589740 - HIST1H2BJ chr6 27094241 - Exonic hg19 BRCA TCGA-A8-A07J-01A 13 4 CDS-3'UTR Intra-chr p21.1 p22.1 Seq+ 64030 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTPBP2-POLH GTPBP2 chr6 43592247 - POLH chr6 43571629 + Exonic hg19 STAD TCGA-BR-8486-01A 2 28 In-Frame Intra-chr p21.1 p21.1 Seq+ 64031 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTPBP2-USP49 GTPBP2 chr6 43593493 - USP49 chr6 41766667 - Exonic hg19 SKCM TCGA-EE-A2MR-06A 2 4 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 64032 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTPBP3-RBM42 GTPBP3 chr19 17450408 - RBM42 chr19 36122042 + Exonic hg19 SKCM TCGA-D3-A2JE-06A 2 5 Out-of-frame Intra-chr p13.11 q13.12 Seq+ 64033 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTSE1-ATXN10 GTSE1 chr22 46719159 - ATXN10 chr22 46085592 + Exonic hg19 LUAD TCGA-44-7660-01A 3 5 In-Frame Intra-chr q13.31 q13.31 Seq+ 64034 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTSE1-ATXN10 GTSE1 chr22 46693376 - ATXN10 chr22 46202839 + Exonic hg19 PAAD TCGA-IB-AAUQ-01A 5 5 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 64035 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTSE1-TTC38 GTSE1 chr22 46693376 - TTC38 chr22 46685723 + Exonic hg19 LUSC TCGA-52-7810-01A 6 1 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 64036 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GTSE1-TTC38 GTSE1 chr22 46693376 - TTC38 chr22 46679870 + Exonic hg19 SKCM TCGA-ER-A2NC-06A 2 1 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 64037 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GUCA2A-ERG GUCA2A chr1 42629074 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-KC-A4BR-01A 47 57 Out-of-frame Inter-chr p34.2 q22.2 Oncogene Transcription factor Seq+ 64038 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GUCY1A2-NLK GUCY1A2 chr11 106647165 - NLK chr17 26512205 + Exonic hg19 BLCA TCGA-2F-A9KO-01A 7 5 In-Frame Inter-chr q22.3 Oncogene q11.2 CMGC:MAPK 64039 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GUCY1B3-PTPRG GUCY1B3 chr4 156681012 - PTPRG chr3 61975299 + Exonic hg19 SARC TCGA-DX-A1KY-01A 2 2 Out-of-frame Inter-chr q32.1 p14.2 Seq+ 64040 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GUCY2C-ART4 GUCY2C chr12 14781580 - ART4 chr12 14982396 - Exonic hg19 STAD TCGA-BR-8060-01A 12 86 Out-of-frame Intra-chr p12.3 Tumor suppressor gene p12.3 Seq+ 64041 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GULP1-BOLL GULP1 chr2 189156893 - BOLL chr2 198607883 - Exonic hg19 BLCA TCGA-GC-A4ZW-01A 21 12 5'UTR-CDS Intra-chr q32.1 q33.1 Seq+ 64042 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GULP1-FSIP2 GULP1 chr2 189434847 - FSIP2 chr2 186604073 + Exonic hg19 BRCA TCGA-A1-A0SP-01A 2 1 In-Frame Intra-chr q32.1 q32.1 64043 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GULP1-KCNJ13 GULP1 chr2 189348219 - KCNJ13 chr2 233636088 - Exonic hg19 PRAD TCGA-V1-A9OY-01A 4 2 5'UTR-5'UTR Intra-chr q32.1 q37.1 Seq+ 64044 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GULP1-NCKAP1 GULP1 chr2 189248616 - NCKAP1 chr2 183853914 - Exonic hg19 PRAD TCGA-J4-A83J-01A 14 14 5'UTR-CDS Intra-chr q32.1 q32.1 Seq+ 64045 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GULP1-NUP35 GULP1 chr2 189248616 - NUP35 chr2 183993015 + Exonic hg19 BRCA TCGA-A1-A0SP-01A 5 2 5'UTR-CDS Intra-chr q32.1 q32.1 Seq+ 64046 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GXYLT2-NEK3 GXYLT2 chr3 72971486 - NEK3 chr13 52719026 - Exonic hg19 SKCM TCGA-EB-A44R-06A 5 1 In-Frame Inter-chr p13 q14.3 Other:NEK Seq+ 64047 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GXYLT2-PRICKLE2 GXYLT2 chr3 72957710 - PRICKLE2 chr3 64148805 - Exonic hg19 SKCM TCGA-D3-A2JG-06A 153 87 In-Frame Intra-chr p13 p14.1 Seq+ 64048 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GXYLT2-VAV1 GXYLT2 chr3 72971486 - VAV1 chr19 6821633 + Exonic hg19 LUAD TCGA-97-A4M5-01A 5 1 In-Frame Inter-chr p13 p13.3 64049 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GYS1-EML2 GYS1 chr19 49485512 - EML2 chr19 46116929 - Exonic hg19 BRCA TCGA-BH-A1F6-01A 269 169 Out-of-frame Intra-chr q13.33 q13.32 Seq+ 64050 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GYS1-HOMER3 GYS1 chr19 49494559 - HOMER3 chr19 19045219 - Exonic hg19 OV TCGA-29-1699-01A 5 10 In-Frame Intra-chr q13.33 p13.11 Seq+ 64051 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq GZMM-HNRNPM GZMM chr19 547436 - HNRNPM chr19 8553575 + Exonic hg19 LUSC TCGA-85-8048-01A 10 6 Out-of-frame Intra-chr p13.3 p13.2 Seq+ 64052 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq H2AFJ-ARFGEF2 H2AFJ chr12 14930934 - ARFGEF2 chr20 47615777 + Exonic hg19 BRCA TCGA-BH-A0HL-01A 2 2 Out-of-frame Inter-chr p12.3 q13.13 64053 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq H2AFV-CDC45 H2AFV chr7 44887568 - CDC45 chr22 19467681 + Exonic hg19 PRAD TCGA-VP-A87J-01A 4 6 In-Frame Inter-chr p13 q11.21 Seq+ 64054 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq H2AFY-CNOT6 H2AFY chr5 134688636 - CNOT6 chr5 179991489 + Exonic hg19 BRCA TCGA-E2-A15E-01A 15 17 In-Frame Intra-chr q31.1 q35.3 Seq+ 64055 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq H2AFY-CNOT6 H2AFY chr5 134688636 - CNOT6 chr5 179991489 + Exonic hg19 BRCA TCGA-E2-A15E-06A 42 35 In-Frame Intra-chr q31.1 q35.3 Seq+ 64056 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq H3F3B-CCT5 H3F3B chr17 73772517 - CCT5 chr5 10250033 + Exonic hg19 LGG TCGA-HT-A61C-01A 2 13 Out-of-frame Inter-chr q25.1 p15.2 64057 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq H6PD-CA6 H6PD chr1 9307142 - CA6 chr1 9027718 + Exonic hg19 BLCA TCGA-G2-AA3D-01A 8 7 In-Frame Intra-chr p36.22 p36.23 Seq+ 64058 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq H6PD-CRISP3 H6PD chr1 9331396 - CRISP3 chr6 49712150 - Exonic hg19 PRAD TCGA-EJ-7784-01A 2 1 3'UTR-5'UTR Inter-chr p36.22 p12.3 64059 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HABP2-LAPTM4B HABP2 chr10 115312949 - LAPTM4B chr8 98817581 + Exonic hg19 LIHC TCGA-RC-A6M4-01A 211 122 In-Frame Inter-chr q25.3 q22.1 Seq+ 64060 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HACE1-FBLN1 HACE1 chr6 105280917 - FBLN1 chr22 45914562 + Exonic hg19 BRCA TCGA-E2-A109-01A 5 1 Out-of-frame Inter-chr q16.3 Tumor suppressor gene q13.31 Tumor suppressor gene Seq+ 64061 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HADH-HPGD HADH chr4 108911220 - HPGD chr4 175429943 - Exonic hg19 UCEC TCGA-AJ-A3NF-01A 27 16 In-Frame Intra-chr q25 q34.1 Tumor suppressor gene Seq+ 64062 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HADH-ZP2 HADH chr4 108911220 - ZP2 chr16 21214572 - Exonic hg19 PAAD TCGA-HZ-7925-01A 7 11 In-Frame Inter-chr q25 Seq+ 64063 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HADHA-DNAJC27 HADHA chr2 26467398 - DNAJC27 chr2 25170617 - Exonic hg19 BLCA TCGA-E7-A3X6-01A 6 1 Out-of-frame Intra-chr p23.3 p23.3 Seq+ 64064 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HAND2-SLC30A9 HAND2 chr4 174449886 - SLC30A9 chr4 42041003 + Exonic hg19 PCPG TCGA-SP-A6QI-01A 21 19 In-Frame Intra-chr q34.1 Transcription factor p13 Seq+ 64065 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HAP1-GAST HAP1 chr17 39887745 - GAST chr17 39871684 + Exonic hg19 BRCA TCGA-AC-A62V-01A 3 3 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 64066 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HARBI1-TNS3 HARBI1 chr11 46637118 - TNS3 chr7 47344601 - Exonic hg19 LGG TCGA-FG-5963-01A 6 3 In-Frame Inter-chr p11.2 p12.3 Seq+ 64067 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HARBI1-TNS3 HARBI1 chr11 46637118 - TNS3 chr7 47344601 - Exonic hg19 LGG TCGA-FG-5963-02A 14 11 In-Frame Inter-chr p11.2 p12.3 Seq+ 64068 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HARS-CLINT1 HARS chr5 140070440 - CLINT1 chr5 157221980 - Exonic hg19 BRCA TCGA-A2-A0EP-01A 4 3 Out-of-frame Intra-chr q31.3 q33.3 Seq+ 64069 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HARS-FAM53C HARS chr5 140070440 - FAM53C chr5 137676873 + Exonic hg19 BRCA TCGA-E9-A1RC-01A 20 16 CDS-5'UTR Intra-chr q31.3 q31.2 Seq+ 64070 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HARS-TMCO6 HARS chr5 140056239 - TMCO6 chr5 140019324 + Exonic hg19 LUSC TCGA-O2-A52N-01A 6 4 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 64071 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HAS2-HHLA1 HAS2 chr8 122653093 - HHLA1 chr8 133112381 - Exonic hg19 LUAD TCGA-55-8089-01A 51 31 5'UTR-CDS Intra-chr q24.13 q24.22 Seq+ 64072 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HAT1-EXOC6B HAT1 chr2 172844276 - EXOC6B chr2 72411316 - Exonic hg19 LUAD TCGA-05-4420-01A 8 10 In-Frame Intra-chr q31.1 p13.2 Seq+ 64073 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HAUS6-PLIN2 HAUS6 chr9 19070217 - PLIN2 chr9 19131269 - Exonic hg19 KIRC TCGA-B0-4821-01A 2 2 CDS-5'UTR Intra-chr p22.1 p22.1 Seq+ 64074 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HAUS6-PMPCA HAUS6 chr9 19094315 - PMPCA chr9 139306942 + Exonic hg19 HNSC TCGA-DQ-7589-01A 3 3 Out-of-frame Intra-chr p22.1 q34.3 Seq+ 64075 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HAUS8-C19orf57 HAUS8 chr19 17170367 - C19orf57 chr19 14001275 - Exonic hg19 BRCA TCGA-EW-A2FR-01A 11 5 In-Frame Intra-chr p13.11 p13.12 Seq+ 64076 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HAUS8-CARS HAUS8 chr19 17179841 - CARS chr11 3040497 - Exonic hg19 BLCA TCGA-XF-AAMZ-01A 4 1 In-Frame Inter-chr p13.11 64077 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HAUS8-QTRT1 HAUS8 chr19 17184084 - QTRT1 chr19 10822837 + Exonic hg19 SARC TCGA-DX-A8BL-01A 72 19 In-Frame Intra-chr p13.11 p13.2 Seq+ 64078 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HAUS8-SGTA HAUS8 chr19 17184084 - SGTA chr19 2759292 - Exonic hg19 PRAD TCGA-YL-A8HL-01A 16 8 Out-of-frame Intra-chr p13.11 p13.3 Seq+ 64079 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HBG2-TRIM22 HBG2 chr11 5367003 - TRIM22 chr11 5718478 + Exonic hg19 HNSC TCGA-CV-7424-01A 5 1 5'UTR-CDS Intra-chr p15.4 p15.4 64080 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HBP1-ATXN7L1 HBP1 chr7 106809472 - ATXN7L1 chr7 105401909 - Exonic hg19 PRAD TCGA-H9-7775-01A 7 26 Out-of-frame Intra-chr Tumor suppressor gene Transcription factor q22.3 Seq+ 64081 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HBP1-SLC26A5 HBP1 chr7 106809630 - SLC26A5 chr7 103019782 - Exonic hg19 STAD TCGA-CD-A486-01A 2 57 5'UTR-CDS Intra-chr Tumor suppressor gene Transcription factor q22.1 Seq+ 64082 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HBS1L-IL9 HBS1L chr6 135371720 - IL9 chr5 135228199 - Exonic hg19 PRAD TCGA-EJ-7794-01A 127 62 Out-of-frame Inter-chr q23.3 q31.1 Seq+ 64083 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HCFC1-EPHA5 HCFC1 chrX 153236099 - EPHA5 chr4 66189937 - Exonic hg19 LUSC TCGA-LA-A446-01A 2 1 Out-of-frame Inter-chr q28 q13.2 Oncogene Seq+ 64084 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HCFC1-MECP2 HCFC1 chrX 153216801 - MECP2 chrX 153357765 - Exonic hg19 BRCA TCGA-D8-A1X9-01A 16 6 CDS-5'UTR Intra-chr q28 q28 Transcription factor Seq+ 64085 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HCFC1-MRFAP1 HCFC1 chrX 153213014 - MRFAP1 chr4 6642418 + Exonic hg19 SKCM TCGA-EB-A431-01A 2 8 Out-of-frame Inter-chr q28 p16.1 64086 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HCFC2-ANKS1B HCFC2 chr12 104492258 - ANKS1B chr12 99640642 - Exonic hg19 LGG TCGA-HT-7611-01A 4 2 Out-of-frame Intra-chr q23.3 q23.1 Seq+ 64087 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HCK-C20orf160 HCK chr20 30640289 - C20orf160 chr20 30616798 + Exonic hg19 LUSC TCGA-66-2766-01A 16 4 Out-of-frame Intra-chr q11.21 TK:Src 64088 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HCN1-SPEF2 HCN1 chr5 45645287 - SPEF2 chr5 35667174 + Exonic hg19 SKCM TCGA-D3-A1Q3-06A 3 2 In-Frame Intra-chr p12 p13.2 Seq+ 64089 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HCN2-ALS2CR11 HCN2 chr19 590577 - ALS2CR11 chr2 202412333 - Exonic hg19 CESC TCGA-C5-A2LZ-01A 2 1 3'UTR-CDS Inter-chr p13.3 Seq+ 64090 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HCN2-BSG HCN2 chr19 590577 - BSG chr19 579500 + Exonic hg19 LGG TCGA-FG-8187-01A 17 20 3'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 64091 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC1-EIF3I HDAC1 chr1 32768334 - EIF3I chr1 32694100 + Exonic hg19 STAD TCGA-BR-A4J1-01A 24 332 In-Frame Intra-chr p35.2 Tumor suppressor gene p35.2 Seq+ 64092 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC1-KPNA6 HDAC1 chr1 32790154 - KPNA6 chr1 32620189 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 12 8 In-Frame Intra-chr p35.2 Tumor suppressor gene p35.2 Seq+ 64093 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC1-LRRC42 HDAC1 chr1 32757819 - LRRC42 chr1 54417659 + Exonic hg19 LGG TCGA-HT-7860-01A 4 5 CDS-5'UTR Intra-chr p35.2 Tumor suppressor gene p32.3 Seq+ 64094 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC1-PEPD HDAC1 chr1 32793278 - PEPD chr19 33904549 - Exonic hg19 BLCA TCGA-GC-A3RD-01A 5 5 Out-of-frame Inter-chr p35.2 Tumor suppressor gene q13.11 Seq+ 64095 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC1-SERINC2 HDAC1 chr1 32768334 - SERINC2 chr1 31883232 + Exonic hg19 GBM TCGA-27-2519-01A 3 1 In-Frame Intra-chr p35.2 Tumor suppressor gene p35.2 Seq+ 64096 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC10-MORN5 HDAC10 chr22 50685108 - MORN5 chr9 124962164 + Exonic hg19 PRAD TCGA-V1-A8WV-01A 5 2 Out-of-frame Inter-chr q13.33 q33.2 Seq+ 64097 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC11-CDH18 HDAC11 chr3 13525064 - CDH18 chr5 19981287 - Exonic hg19 SARC TCGA-DX-A3LS-01A 24 18 CDS-5'UTR Inter-chr p25.1 p14.3 Seq+ 64098 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC2-TRDN HDAC2 chr6 114292021 - TRDN chr6 123545276 - Exonic hg19 BRCA TCGA-BH-A203-01A 19 24 In-Frame Intra-chr q21 q22.31 Seq+ 64099 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC4-BRAT1 HDAC4 chr2 240002791 - BRAT1 chr7 2594081 - Exonic hg19 LGG TCGA-CS-6666-01A 5 2 CDS-5'UTR Inter-chr q37.3 p22.3 Seq+ 64100 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC4-PDE11A HDAC4 chr2 240274373 - PDE11A chr2 178769914 - Exonic hg19 SKCM TCGA-GN-A264-06A 19 15 Out-of-frame Intra-chr q37.3 q31.2 Seq+ 64101 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC4-SATB2 HDAC4 chr2 240158289 - SATB2 chr2 200298237 - Exonic hg19 BLCA TCGA-BL-A13J-01A 3 1 In-Frame Intra-chr q37.3 q33.1 Transcription factor Seq+ 64102 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC4-SNX18 HDAC4 chr2 240158289 - SNX18 chr5 53839009 + Exonic hg19 LUAD TCGA-78-7536-01A 17 14 In-Frame Inter-chr q37.3 q11.2 Seq+ 64103 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC4-THAP4 HDAC4 chr2 240274373 - THAP4 chr2 242545888 - Exonic hg19 LIHC TCGA-CC-A3MA-01A 105 81 In-Frame Intra-chr q37.3 q37.3 Transcription factor Seq+ 64104 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC4-UPB1 HDAC4 chr2 240274373 - UPB1 chr22 24890077 + Exonic hg19 UCEC TCGA-BK-A139-02A 5 7 CDS-5'UTR Inter-chr q37.3 q11.23 Seq+ 64105 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC5-MYO18A HDAC5 chr17 42194862 - MYO18A chr17 27494039 - Exonic hg19 LGG TCGA-TQ-A7RP-01A 12 2 CDS-5'UTR Intra-chr q21.31 q11.2 Oncogene 64106 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC5-SLC13A2 HDAC5 chr17 42188097 - SLC13A2 chr17 26816232 + Exonic hg19 THYM TCGA-ZB-A961-01A 12 6 Out-of-frame Intra-chr q21.31 q11.2 Seq+ 64107 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC7-ACSS3 HDAC7 chr12 48213550 - ACSS3 chr12 81528595 + Exonic hg19 SARC TCGA-DX-A7EI-01A 4 7 Out-of-frame Intra-chr q13.11 q21.31 64108 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC7-COL2A1 HDAC7 chr12 48213550 - COL2A1 chr12 48393908 - Exonic hg19 STAD TCGA-VQ-A8PJ-01A 2 12 In-Frame Intra-chr q13.11 q13.11 Seq+ 64109 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC7-IRAK4 HDAC7 chr12 48185042 - IRAK4 chr12 44161906 + Exonic hg19 BRCA TCGA-E2-A14T-01A 31 7 CDS-5'UTR Intra-chr q13.11 q12 TKL:IRAK Seq+ 64110 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC7-SRGAP1 HDAC7 chr12 48181828 - SRGAP1 chr12 64536075 + Exonic hg19 SARC TCGA-DX-A3LT-01A 443 314 In-Frame Intra-chr q13.11 q14.2 Seq+ 64111 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC7-VDR HDAC7 chr12 48191167 - VDR chr12 48240591 - Exonic hg19 UCEC TCGA-EY-A54A-01A 4 4 Out-of-frame Intra-chr q13.11 q13.11 Tumor suppressor gene Transcription factor Seq+ 64112 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC7-VDR HDAC7 chr12 48213550 - VDR chr12 48258960 - Exonic hg19 ACC TCGA-OR-A5JM-01A 16 7 Out-of-frame Intra-chr q13.11 q13.11 Tumor suppressor gene Transcription factor Seq+ 64113 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC7-VSTM2B HDAC7 chr12 48213550 - VSTM2B chr19 30018118 + Exonic hg19 UCEC TCGA-AJ-A3BF-01A 31 22 In-Frame Inter-chr q13.11 q12 Seq+ 64114 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC8-PHKA1 HDAC8 chrX 71787739 - PHKA1 chrX 71804152 - Exonic hg19 PRAD TCGA-G9-7523-01A 8 8 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 64115 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC9-AC005014.4 HDAC9 chr7 18201972 - AC005014.4 chr7 16605938 + Exonic hg19 LUAD TCGA-44-4112-01A 2 1 Out-of-frame Intra-chr p21.1 64116 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC9-AC010859.1 HDAC9 chr7 18126836 - AC010859.1 chr8 98078237 + Exonic hg19 LGG TCGA-CS-6188-01A 4 3 Out-of-frame Inter-chr p21.1 64117 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC9-C1orf105 HDAC9 chr7 18535947 - C1orf105 chr1 172434439 + Exonic hg19 UCS TCGA-N5-A4RT-01A 6 1 Out-of-frame Inter-chr p21.1 q24.3 Seq+ 64118 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC9-C8orf34 HDAC9 chr7 18688306 - C8orf34 chr8 69552611 + Exonic hg19 LUSC TCGA-68-A59I-01A 10 1 Out-of-frame Inter-chr p21.1 q13.2 Seq+ 64119 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC9-LINGO2 HDAC9 chr7 18625145 - LINGO2 chr9 28476023 - Exonic hg19 SKCM TCGA-DA-A1HW-06A 4 2 CDS-5'UTR Inter-chr p21.1 p21.1 Seq+ 64120 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC9-PPL HDAC9 chr7 18201972 - PPL chr16 4960950 - Exonic hg19 BRCA TCGA-AN-A0FZ-01A 2 1 Out-of-frame Inter-chr p21.1 p13.3 64121 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDAC9-SNX10 HDAC9 chr7 18201972 - SNX10 chr7 26400595 + Exonic hg19 LUAD TCGA-69-7978-01A 2 1 Out-of-frame Intra-chr p21.1 p15.2 64122 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDDC2-STBD1 HDDC2 chr6 125613987 - STBD1 chr4 77184857 + Exonic hg19 BRCA TCGA-AR-A5QQ-01A 33 3 CDS-5'UTR Inter-chr q22.31 q21.1 64123 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDDC2-TPD52L1 HDDC2 chr6 125619860 - TPD52L1 chr6 125583980 + Exonic hg19 BLCA TCGA-DK-A1A7-01A 115 66 In-Frame Intra-chr q22.31 q22.31 Seq+ 64124 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDHD2-SNF8 HDHD2 chr18 44676749 - SNF8 chr17 47014486 - Exonic hg19 BRCA TCGA-BH-A0AW-01A 65 23 5'UTR-CDS Inter-chr q21.1 q21.32 Seq+ 64125 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDLBP-ANKS1A HDLBP chr2 242168639 - ANKS1A chr6 34977682 + Exonic hg19 KIRP TCGA-BQ-7046-01A 2 2 Out-of-frame Inter-chr q37.3 p21.31 64126 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDLBP-CADM2 HDLBP chr2 242254985 - CADM2 chr3 85851197 + Exonic hg19 LUAD TCGA-50-5933-01A 5 1 5'UTR-5'UTR Inter-chr q37.3 p12.1 Tumor suppressor gene Seq+ 64127 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDLBP-CLASP2 HDLBP chr2 242168637 - CLASP2 chr3 33602368 - Exonic hg19 PRAD TCGA-HC-7210-01A 2 3 Out-of-frame Inter-chr q37.3 p22.3 64128 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDLBP-DDX27 HDLBP chr2 242168627 - DDX27 chr20 47849303 + Exonic hg19 PRAD TCGA-EJ-5503-01A 2 2 Out-of-frame Inter-chr q37.3 q13.13 64129 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDLBP-DSP HDLBP chr2 242168639 - DSP chr6 7575528 + Exonic hg19 PRAD TCGA-EJ-7218-01B 2 1 3'UTR-CDS Inter-chr q37.3 p24.3 Tumor suppressor gene Seq+ 64130 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDLBP-EEA1 HDLBP chr2 242168639 - EEA1 chr12 93229203 - Exonic hg19 SKCM TCGA-FS-A1ZE-06A 2 1 Out-of-frame Inter-chr q37.3 q22 Transcription factor 64131 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDLBP-NSRP1 HDLBP chr2 242169248 - NSRP1 chr17 28499560 + Exonic hg19 PRAD TCGA-YJ-A8SW-01A 50 23 In-Frame Inter-chr q37.3 q11.2 Seq+ 64132 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDLBP-SMARCE1 HDLBP chr2 242168637 - SMARCE1 chr17 38786538 - Exonic hg19 PRAD TCGA-EJ-7328-01A 2 16 Out-of-frame Inter-chr q37.3 q21.2 64133 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDLBP-SPON2 HDLBP chr2 242168877 - SPON2 chr4 1198876 - Exonic hg19 PRAD TCGA-HC-7077-01A 3 1 Out-of-frame Inter-chr q37.3 p16.3 64134 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDLBP-STAT6 HDLBP chr2 242168639 - STAT6 chr12 57496773 - Exonic hg19 PRAD TCGA-YL-A8SB-01A 2 7 Out-of-frame Inter-chr q37.3 q13.3 Transcription factor 64135 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDLBP-TMC1 HDLBP chr2 242186471 - TMC1 chr9 75445367 + Exonic hg19 PRAD TCGA-HC-A631-01A 313 134 Out-of-frame Inter-chr q37.3 q21.13 Seq+ 64136 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HDX-ERICH1 HDX chrX 83757350 - ERICH1 chr8 614676 - Exonic hg19 SARC TCGA-DX-A3LY-01B 3 7 5'UTR-CDS Inter-chr q21.1 Transcription factor Seq+ 64137 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEATR2-BRAT1 HEATR2 chr7 769484 - BRAT1 chr7 2587112 - Exonic hg19 SKCM TCGA-EB-A44R-06A 50 28 Out-of-frame Intra-chr p22.3 Seq+ 64138 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEATR2-LAMA5 HEATR2 chr7 769484 - LAMA5 chr20 60886150 - Exonic hg19 SARC TCGA-DX-A6YQ-01A 21 8 Out-of-frame Inter-chr q13.33 64139 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEATR2-ZNRF3 HEATR2 chr7 769484 - ZNRF3 chr22 29442704 + Exonic hg19 BLCA TCGA-FD-A3B6-01A 3 2 In-Frame Inter-chr q12.1 64140 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEATR3-CHRNB3 HEATR3 chr16 50100450 - CHRNB3 chr8 42585737 + Exonic hg19 BRCA TCGA-B6-A0RM-01A 3 3 Out-of-frame Inter-chr q12.1 p11.21 Seq+ 64141 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEATR5B-MYB HEATR5B chr2 37215789 - MYB chr6 135522777 + Exonic hg19 BRCA TCGA-A1-A0SB-01A 8 8 Out-of-frame Inter-chr p22.2 q23.3 Oncogene Transcription factor Seq+ 64142 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEATR5B-NCALD HEATR5B chr2 37280645 - NCALD chr8 102705124 - Exonic hg19 SKCM TCGA-EE-A3AG-06A 2 1 In-Frame Inter-chr p22.2 q22.3 Seq+ 64143 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEATR6-C17orf64 HEATR6 chr17 58153491 - C17orf64 chr17 58508542 + Exonic hg19 BRCA TCGA-AC-A62V-01A 14 6 Out-of-frame Intra-chr q23.1 q23.2 Seq+ 64144 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEATR6-FGF10 HEATR6 chr17 58132876 - FGF10 chr5 44310632 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 4 6 Out-of-frame Inter-chr q23.1 p12 Seq+ 64145 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEATR6-GALNT13 HEATR6 chr17 58156057 - GALNT13 chr2 155306923 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 6 7 In-Frame Inter-chr q23.1 q23.3 Seq+ 64146 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEATR6-STXBP4 HEATR6 chr17 58156057 - STXBP4 chr17 53108529 + Exonic hg19 SARC TCGA-KD-A5QS-01A 4 1 In-Frame Intra-chr q23.1 q22 Seq+ 64147 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEATR6-WEE1 HEATR6 chr17 58149576 - WEE1 chr11 9603079 + Exonic hg19 BRCA TCGA-E9-A1N8-01A 3 5 Out-of-frame Inter-chr q23.1 p15.4 Seq+ 64148 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEATR7A-ARMC2 HEATR7A chr8 145278133 - ARMC2 chr6 109190027 + Exonic hg19 BRCA TCGA-BH-A0C0-01A 5 12 In-Frame Inter-chr q21 64149 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEATR7A-GPAA1 HEATR7A chr8 145223343 - GPAA1 chr8 145138292 + Exonic hg19 BRCA TCGA-BH-A18T-01A 12 14 Out-of-frame Intra-chr q24.3 Seq+ 64150 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEATR7A-PKMYT1 HEATR7A chr8 145255444 - PKMYT1 chr16 3027032 - Exonic hg19 PRAD TCGA-ZG-A9L5-01A 14 4 In-Frame Inter-chr p13.3 64151 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEATR7A-TCTEX1D2 HEATR7A chr8 145218751 - TCTEX1D2 chr3 196043102 - Exonic hg19 LUSC TCGA-66-2785-01A 35 22 Out-of-frame Inter-chr q29 64152 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEATR7A-ZNF623 HEATR7A chr8 145255444 - ZNF623 chr8 144732068 + Exonic hg19 LUAD TCGA-38-4630-01A 14 4 CDS-5'UTR Intra-chr Transcription factor Seq+ 64153 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEATR7B2-MRPS30 HEATR7B2 chr5 41017952 - MRPS30 chr5 44813208 + Exonic hg19 LUAD TCGA-55-1596-01A 55 33 In-Frame Intra-chr p12 Seq+ 64154 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEBP1-CREBL2 HEBP1 chr12 13152971 - CREBL2 chr12 12788711 + Exonic hg19 LUAD TCGA-MP-A4SV-01A 2 7 In-Frame Intra-chr p13.1 p13.1 Transcription factor Seq+ 64155 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEBP1-NCK1 HEBP1 chr12 13140086 - NCK1 chr3 136667101 + Exonic hg19 HNSC TCGA-QK-A8ZB-01A 125 79 Out-of-frame Inter-chr p13.1 q22.3 Seq+ 64156 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEBP1-ZBTB46 HEBP1 chr12 13140086 - ZBTB46 chr20 62378654 - Exonic hg19 LUAD TCGA-44-A47B-01A 7 5 Out-of-frame Inter-chr p13.1 q13.33 Transcription factor Seq+ 64157 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HECTD1-DHRS4L2 HECTD1 chr14 31614013 - DHRS4L2 chr14 24459391 + Exonic hg19 KICH TCGA-KL-8339-01A 7 5 Out-of-frame Intra-chr q12 q11.2 Seq+ 64158 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HECTD1-HEATR5A HECTD1 chr14 31604078 - HEATR5A chr14 31814482 - Exonic hg19 LIHC TCGA-2Y-A9H0-01A 3 1 Out-of-frame Intra-chr q12 q12 Seq+ 64159 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HECTD1-PRPF39 HECTD1 chr14 31675003 - PRPF39 chr14 45564424 + Exonic hg19 BRCA TCGA-AR-A0TV-01A 8 2 CDS-5'UTR Intra-chr q12 q21.2 Seq+ 64160 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HECTD2-GLRX3 HECTD2 chr10 93170333 - GLRX3 chr10 131978377 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 2 1 CDS-3'UTR Intra-chr q23.32 q26.3 Seq+ 64161 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HECTD2-PCGF5 HECTD2 chr10 93185167 - PCGF5 chr10 93031395 + Exonic hg19 BRCA TCGA-A8-A09A-01A 5 4 Out-of-frame Intra-chr q23.32 q23.32 Seq+ 64162 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HECTD2-PCGF5 HECTD2 chr10 93185167 - PCGF5 chr10 93021083 + Exonic hg19 BRCA TCGA-C8-A1HG-01A 7 7 Out-of-frame Intra-chr q23.32 q23.32 Seq+ 64163 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HECW2-PRKCE HECW2 chr2 197458232 - PRKCE chr2 46070139 + Exonic hg19 PCPG TCGA-RW-A688-01A 4 1 5'UTR-CDS Intra-chr q32.3 p21 Tumor suppressor gene 64164 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEG1-SLC12A8 HEG1 chr3 124774419 - SLC12A8 chr3 124854626 - Exonic hg19 LUSC TCGA-77-A5GH-01A 2 1 In-Frame Intra-chr q21.2 q21.2 Seq+ 64165 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEG1-SLC12A8 HEG1 chr3 124696703 - SLC12A8 chr3 124811042 - Exonic hg19 BRCA TCGA-A8-A07C-01A 6 4 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 64166 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEG1-SLC12A8 HEG1 chr3 124774419 - SLC12A8 chr3 124829179 - Exonic hg19 STAD TCGA-CG-4449-01A 3 2 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 64167 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEG1-SLC12A8 HEG1 chr3 124774419 - SLC12A8 chr3 124839530 - Exonic hg19 ACC TCGA-OR-A5J7-01A 5 4 In-Frame Intra-chr q21.2 q21.2 Seq+ 64168 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HELB-GRIP1 HELB chr12 66704388 - GRIP1 chr12 66773216 - Exonic hg19 HNSC TCGA-DQ-7594-01A 5 3 Out-of-frame Intra-chr q14.3 q14.3 64169 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HELB-MGAT4C HELB chr12 66704388 - MGAT4C chr12 86889092 - Exonic hg19 SARC TCGA-3B-A9HL-01A 6 3 Out-of-frame Intra-chr q14.3 64170 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HELLS-TBC1D12 HELLS chr10 96348147 - TBC1D12 chr10 96281712 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 5 3 In-Frame Intra-chr q23.33 q23.33 Seq+ 64171 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HELZ-ABCA10 HELZ chr17 65239900 - ABCA10 chr17 67223426 - Exonic hg19 BLCA TCGA-BT-A2LA-01A 3 2 5'UTR-5'UTR Intra-chr q24.2 q24.3 Seq+ 64172 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HELZ-CACNG4 HELZ chr17 65116521 - CACNG4 chr17 65026582 + Exonic hg19 LUAD TCGA-78-7146-01A 50 24 In-Frame Intra-chr q24.2 q24.2 Seq+ 64173 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HELZ-CEP112 HELZ chr17 65116521 - CEP112 chr17 63685336 - Exonic hg19 BLCA TCGA-CU-A3KJ-01A 13 2 Out-of-frame Intra-chr q24.2 q24.1 Seq+ 64174 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HELZ-OAZ1 HELZ chr17 65199435 - OAZ1 chr19 2272734 + Exonic hg19 SARC TCGA-N1-A6IA-01A 39 14 Out-of-frame Inter-chr q24.2 p13.3 Seq+ 64175 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HELZ-PITPNC1 HELZ chr17 65103285 - PITPNC1 chr17 65688688 + Exonic hg19 BRCA TCGA-E2-A1B5-01A 10 8 In-Frame Intra-chr q24.2 q24.2 Seq+ 64176 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HELZ-TAF15 HELZ chr17 65124767 - TAF15 chr17 34144720 + Exonic hg19 BRCA TCGA-3C-AALI-01A 20 16 Out-of-frame Intra-chr q24.2 q12 Seq+ 64177 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HELZ-TTYH2 HELZ chr17 65174775 - TTYH2 chr17 72248373 + Exonic hg19 BRCA TCGA-OL-A5RZ-01A 6 4 Out-of-frame Intra-chr q24.2 q25.1 Seq+ 64178 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HENMT1-MYBPHL HENMT1 chr1 109197338 - MYBPHL chr1 109840879 - Exonic hg19 UCEC TCGA-EY-A54A-01A 9 3 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 64179 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEPHL1-GUCY1A2 HEPHL1 chr11 93797676 - GUCY1A2 chr11 106856857 - Exonic hg19 HNSC TCGA-P3-A6T5-01A 2 2 Out-of-frame Intra-chr q21 q22.3 Oncogene 64180 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HERC1-C15orf44 HERC1 chr15 64126026 - C15orf44 chr15 65877226 - Exonic hg19 BLCA TCGA-E7-A4IJ-01A 2 1 5'UTR-CDS Intra-chr q22.31 64181 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HERC1-CSNK1G1 HERC1 chr15 63970044 - CSNK1G1 chr15 64658274 - Exonic hg19 BRCA TCGA-LL-A5YN-01A 10 3 CDS-5'UTR Intra-chr q22.31 q22.31 64182 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HERC1-DAPK2 HERC1 chr15 64126026 - DAPK2 chr15 64204396 - Exonic hg19 BRCA TCGA-D8-A1JK-01A 8 10 5'UTR-CDS Intra-chr q22.31 q22.31 CAMK:DAPK Tumor suppressor gene Seq+ 64183 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HERC1-DAPK2 HERC1 chr15 64126026 - DAPK2 chr15 64231560 - Exonic hg19 BLCA TCGA-DK-A3X2-01A 4 2 5'UTR-CDS Intra-chr q22.31 q22.31 CAMK:DAPK Tumor suppressor gene Seq+ 64184 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HERC1-DAPK2 HERC1 chr15 64126026 - DAPK2 chr15 64332466 - Exonic hg19 LIHC TCGA-NI-A8LF-01A 6 1 5'UTR-5'UTR Intra-chr q22.31 q22.31 CAMK:DAPK Tumor suppressor gene Seq+ 64185 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HERC1-DAPK2 HERC1 chr15 63956669 - DAPK2 chr15 64275953 - Exonic hg19 ACC TCGA-OR-A5JC-01A 2 3 Out-of-frame Intra-chr q22.31 q22.31 CAMK:DAPK Tumor suppressor gene Seq+ 64186 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HERC1-DAPK2 HERC1 chr15 63988323 - DAPK2 chr15 64263760 - Exonic hg19 STAD TCGA-VQ-A8E2-01A 4 5 Out-of-frame Intra-chr q22.31 q22.31 CAMK:DAPK Tumor suppressor gene Seq+ 64187 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HERC1-KIAA0101 HERC1 chr15 64045157 - KIAA0101 chr15 64658274 - Exonic hg19 BRCA TCGA-AQ-A54N-01A 19 10 Out-of-frame Intra-chr q22.31 Seq+ 64188 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HERC1-KIAA0101 HERC1 chr15 63970044 - KIAA0101 chr15 64658274 - Exonic hg19 BRCA TCGA-LL-A5YN-01A 19 2 In-Frame Intra-chr q22.31 Seq+ 64189 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HERC1-MYO5A HERC1 chr15 63904450 - MYO5A chr15 52622696 - Exonic hg19 KICH TCGA-KL-8341-01A 5 4 Out-of-frame Intra-chr q22.31 q21.2 Seq+ 64190 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HERC1-SNX6 HERC1 chr15 64126026 - SNX6 chr14 35032381 - Exonic hg19 PRAD TCGA-YL-A9WH-01A 21 3 5'UTR-CDS Inter-chr q22.31 q13.1 Seq+ 64191 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HERC1-USP3 HERC1 chr15 63961737 - USP3 chr15 63821213 + Exonic hg19 LUSC TCGA-77-8139-01A 2 1 CDS-5'UTR Intra-chr q22.31 q22.31 64192 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HERC1-USP3 HERC1 chr15 63915014 - USP3 chr15 63845914 + Exonic hg19 BRCA TCGA-A2-A1G1-01A 2 1 In-Frame Intra-chr q22.31 q22.31 64193 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HERC2-IGFBP6 HERC2 chr15 28387384 - IGFBP6 chr12 53494496 + Exonic hg19 SKCM TCGA-RP-A695-06A 2 2 Out-of-frame Inter-chr q13.13 Seq+ 64194 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HERC4-CCDC6 HERC4 chr10 69692354 - CCDC6 chr10 61554355 - Exonic hg19 STAD TCGA-BR-8059-01A 3 6 Out-of-frame Intra-chr q21.3 q21.2 Seq+ 64195 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HERC4-CDKAL1 HERC4 chr10 69792535 - CDKAL1 chr6 21000458 + Exonic hg19 BLCA TCGA-FD-A3SJ-01A 10 14 In-Frame Inter-chr q21.3 p22.3 Seq+ 64196 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HERC4-CTNNA3 HERC4 chr10 69748420 - CTNNA3 chr10 67748555 - Exonic hg19 HNSC TCGA-BB-7861-01A 8 3 Out-of-frame Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 64197 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HERC4-PBLD HERC4 chr10 69832640 - PBLD chr10 70056742 - Exonic hg19 STAD TCGA-D7-A4YY-01A 2 2 Out-of-frame Intra-chr q21.3 q21.3 64198 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HERC4-RUFY2 HERC4 chr10 69792535 - RUFY2 chr10 70105668 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 21 26 In-Frame Intra-chr q21.3 q21.3 Seq+ 64199 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HERC4-RUFY2 HERC4 chr10 69785303 - RUFY2 chr10 70136729 - Exonic hg19 STAD TCGA-BR-8373-01A 2 2 In-Frame Intra-chr q21.3 q21.3 Seq+ 64200 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HERC6-CABP4 HERC6 chr4 89312031 - CABP4 chr11 67225842 + Exonic hg19 CESC TCGA-DS-A3LQ-01A 3 1 Out-of-frame Inter-chr q22.1 q13.2 64201 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HERPUD1-THADA HERPUD1 chr16 56970729 - THADA chr2 43657441 - Exonic hg19 UCS TCGA-NA-A4QV-01A 86 33 In-Frame Inter-chr q13 p21 Seq+ 64202 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HERPUD2-AOAH HERPUD2 chr7 35733794 - AOAH chr7 36580097 - Exonic hg19 LIHC TCGA-ZS-A9CF-01A 5 4 Out-of-frame Intra-chr p14.2 p14.2 Seq+ 64203 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HERPUD2-AOAH HERPUD2 chr7 35733794 - AOAH chr7 36580097 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 9 7 Out-of-frame Intra-chr p14.2 p14.2 Seq+ 64204 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEXA-BBS4 HEXA chr15 72668061 - BBS4 chr15 72987518 + Exonic hg19 LUSC TCGA-L3-A524-01A 535 284 Out-of-frame Intra-chr q23 q24.1 Seq+ 64205 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEXB-FAM169A HEXB chr5 74001145 - FAM169A chr5 74078959 - Exonic hg19 STAD TCGA-BR-8373-01A 15 93 In-Frame Intra-chr q13.3 q13.3 Seq+ 64206 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEXB-SUPT16H HEXB chr5 74017113 - SUPT16H chr14 21829491 - Exonic hg19 READ TCGA-DY-A1DD-01A 2 14 Out-of-frame Inter-chr q13.3 q11.2 64207 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEXDC-C17orf62 HEXDC chr17 80399765 - C17orf62 chr17 80403836 - Exonic hg19 LGG TCGA-IK-7675-01A 3 1 Out-of-frame Intra-chr q25.3 q25.3 64208 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEYL-COL9A2 HEYL chr1 40105218 - COL9A2 chr1 40777387 - Exonic hg19 BRCA TCGA-E2-A15E-01A 21 5 Out-of-frame Intra-chr p34.2 Transcription factor p34.2 Seq+ 64209 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HEYL-COL9A2 HEYL chr1 40105218 - COL9A2 chr1 40777387 - Exonic hg19 BRCA TCGA-E2-A15E-06A 52 30 Out-of-frame Intra-chr p34.2 Transcription factor p34.2 Seq+ 64210 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HGD-CACNA1D HGD chr3 120389274 - CACNA1D chr3 53777038 + Exonic hg19 PRAD TCGA-EJ-5516-01A 10 11 In-Frame Intra-chr q13.33 p21.1 Seq+ 64211 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HGD-RABL3 HGD chr3 120371439 - RABL3 chr3 120413071 - Exonic hg19 LIHC TCGA-BC-A10Z-01A 167 159 In-Frame Intra-chr q13.33 q13.33 Seq+ 64212 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HGS-BAIAP2 HGS chr17 79658601 - BAIAP2 chr17 79089570 + Exonic hg19 STAD TCGA-BR-4357-01A 29 11 In-Frame Intra-chr q25.3 q25.3 64213 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HGS-GNAO1 HGS chr17 79654125 - GNAO1 chr16 56377675 + Exonic hg19 LUSC TCGA-37-3792-01A 79 24 Out-of-frame Inter-chr q25.3 q13 Seq+ 64214 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HGSNAT-AGPAT6 HGSNAT chr8 43024385 - AGPAT6 chr8 41466935 + Exonic hg19 LUSC TCGA-63-7022-01A 4 1 In-Frame Intra-chr p11.21 Seq+ 64215 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HGSNAT-FUT10 HGSNAT chr8 43037403 - FUT10 chr8 33230322 - Exonic hg19 BLCA TCGA-UY-A8OC-01A 89 53 In-Frame Intra-chr p11.21 p12 Seq+ 64216 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HGSNAT-MBOAT1 HGSNAT chr8 43028886 - MBOAT1 chr6 20153000 - Exonic hg19 BRCA TCGA-C8-A1HK-01A 2 2 Out-of-frame Inter-chr p11.21 p22.3 64217 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HGSNAT-VSTM2B HGSNAT chr8 43037403 - VSTM2B chr19 30054753 + Exonic hg19 OV TCGA-31-1950-01A 39 90 Out-of-frame Inter-chr p11.21 q12 Seq+ 64218 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HHAT-CD34 HHAT chr1 210637999 - CD34 chr1 208061268 - Exonic hg19 BRCA TCGA-AN-A0FT-01A 3 2 Out-of-frame Intra-chr q32.2 64219 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HHAT-KIF5B HHAT chr1 210591669 - KIF5B chr10 32329385 - Exonic hg19 PRAD TCGA-VN-A88L-01A 3 2 In-Frame Inter-chr p11.22 64220 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HHAT-PPPDE1 HHAT chr1 210637999 - PPPDE1 chr1 244868858 + Exonic hg19 LUSC TCGA-34-5236-01A 8 7 Out-of-frame Intra-chr Seq+ 64221 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HHAT-RFWD2 HHAT chr1 210797014 - RFWD2 chr1 175916375 - Exonic hg19 BRCA TCGA-S3-A6ZG-01A 7 16 Out-of-frame Intra-chr q25.2 Tumor suppressor gene Seq+ 64222 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HHAT-SERTAD4 HHAT chr1 210578023 - SERTAD4 chr1 210411289 + Exonic hg19 BRCA TCGA-AC-A2BM-01A 9 6 CDS-5'UTR Intra-chr Seq+ 64223 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HHIPL1-CCNK HHIPL1 chr14 100111799 - CCNK chr14 99973413 + Exonic hg19 SARC TCGA-K1-A42X-01A 4 4 Out-of-frame Intra-chr q32.2 q32.2 Seq+ 64224 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HHIPL1-CCNK HHIPL1 chr14 100111799 - CCNK chr14 99973413 + Exonic hg19 SARC TCGA-K1-A42X-02A 5 2 Out-of-frame Intra-chr q32.2 q32.2 Seq+ 64225 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HHIPL2-TLR5 HHIPL2 chr1 222700311 - TLR5 chr1 223310605 - Exonic hg19 BRCA TCGA-E2-A1LK-01A 6 1 CDS-5'UTR Intra-chr q41 q41 64226 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIAT1-PALMD HIAT1 chr1 100535241 - PALMD chr1 100127875 + Exonic hg19 LUSC TCGA-77-7139-01A 5 2 In-Frame Intra-chr p21.2 64227 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIATL1-PTPDC1 HIATL1 chr9 97209218 - PTPDC1 chr9 96857599 + Exonic hg19 LIHC TCGA-BC-A8YO-01A 4 2 Out-of-frame Intra-chr q22.32 64228 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIBADH-BRAF HIBADH chr7 27668990 - BRAF chr7 140501360 - Exonic hg19 SKCM TCGA-BF-A5EP-01A 7 5 Out-of-frame Intra-chr p15.2 q34 TKL:RAF Oncogene Seq+ 64229 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIBADH-C7orf10 HIBADH chr7 27668990 - C7orf10 chr7 40789033 + Exonic hg19 GBM TCGA-32-1970-01A 17 30 Out-of-frame Intra-chr p15.2 Seq+ 64230 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIBCH-CTNNA2 HIBCH chr2 191175480 - CTNNA2 chr2 80620336 + Exonic hg19 BRCA TCGA-A8-A09M-01A 8 18 In-Frame Intra-chr q32.2 p12 Tumor suppressor gene Seq+ 64231 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIBCH-INPP1 HIBCH chr2 191184442 - INPP1 chr2 191224765 + Exonic hg19 LUSC TCGA-56-8083-01A 10 4 CDS-5'UTR Intra-chr q32.2 q32.2 Seq+ 64232 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIBCH-MFSD6 HIBCH chr2 191109613 - MFSD6 chr2 191300703 + Exonic hg19 LUSC TCGA-96-7544-01A 2 2 CDS-5'UTR Intra-chr q32.2 q32.2 64233 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIF1A-C14orf37 HIF1A chr14 62162557 - C14orf37 chr14 58606132 - Exonic hg19 SARC TCGA-LI-A9QH-01A 7 5 5'UTR-5'UTR Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 Seq+ 64234 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIF1A-MNAT1 HIF1A chr14 62162557 - MNAT1 chr14 61262935 + Exonic hg19 BRCA TCGA-D8-A1JL-01A 71 44 In-Frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 Seq+ 64235 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIF1A-PRKCH HIF1A chr14 62162557 - PRKCH chr14 61909829 + Exonic hg19 OV TCGA-20-0987-01A 2 1 Out-of-frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 Seq+ 64236 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIF1A-PRKCH HIF1A chr14 62207906 - PRKCH chr14 61995793 + Exonic hg19 LUAD TCGA-44-2668-01A 56 33 In-Frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 Seq+ 64237 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIF1A-PRKCH HIF1A chr14 62162557 - PRKCH chr14 61995793 + Exonic hg19 UCEC TCGA-EO-A22U-01A 2 2 In-Frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 Seq+ 64238 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIF1A-PRKCH HIF1A chr14 62162557 - PRKCH chr14 61857943 + Exonic hg19 STAD TCGA-HU-A4GH-01A 4 55 Out-of-frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 Seq+ 64239 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIF1A-RP11-47I22.3 HIF1A chr14 62207906 - RP11-47I22.3 chr14 62117680 + Exonic hg19 LUSC TCGA-22-1002-01A 10 6 Out-of-frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor 64240 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIF1A-RP11-47I22.3 HIF1A chr14 62162557 - RP11-47I22.3 chr14 62117680 + Exonic hg19 LUSC TCGA-6A-AB49-01A 2 1 Out-of-frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor 64241 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIF1A-RP11-47I22.3 HIF1A chr14 62162557 - RP11-47I22.3 chr14 62117680 + Exonic hg19 KIRC TCGA-CJ-4868-01A 5 1 Out-of-frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor 64242 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIF1A-RP11-47I22.3 HIF1A chr14 62162557 - RP11-47I22.3 chr14 62117680 + Exonic hg19 CESC TCGA-DS-A1OC-01A 20 15 Out-of-frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor 64243 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIF1A-RP11-47I22.4 HIF1A chr14 62162557 - RP11-47I22.4 chr14 62124323 + Exonic hg19 LUSC TCGA-37-A5EN-01A 17 17 Out-of-frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor 64244 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIF1A-RP11-47I22.4 HIF1A chr14 62162557 - RP11-47I22.4 chr14 62124323 + Exonic hg19 CESC TCGA-DS-A1OC-01A 20 13 Out-of-frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor 64245 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIF1A-VRK1 HIF1A chr14 62162557 - VRK1 chr14 97299804 + Exonic hg19 LGG TCGA-R8-A6MK-01A 34 27 5'UTR-5'UTR Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q32.2 CK1:VRK Seq+ 64246 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HINT2-NPR2 HINT2 chr9 35814896 - NPR2 chr9 35805508 + Exonic hg19 LIHC TCGA-DD-AAW2-01A 3 3 In-Frame Intra-chr p13.3 p13.3 Tumor suppressor gene Seq+ 64247 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIPK1-LRRC42 HIPK1 chr1 114505060 - LRRC42 chr1 54427707 + Exonic hg19 STAD TCGA-CG-4449-01A 3 9 Out-of-frame Intra-chr p13.2 CMGC:DYRK p32.3 Seq+ 64248 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIPK2-ADCK2 HIPK2 chr7 139477404 - ADCK2 chr7 140374411 + Exonic hg19 LUAD TCGA-78-7154-01A 10 6 Out-of-frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Atypical:ABC1 Seq+ 64249 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIPK2-ARPC1A HIPK2 chr7 139477404 - ARPC1A chr7 98935804 + Exonic hg19 SKCM TCGA-D3-A3C1-06A 67 66 In-Frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q22.1 Seq+ 64250 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIPK2-DENND2A HIPK2 chr7 139477404 - DENND2A chr7 140287580 - Exonic hg19 OV TCGA-24-1546-01A 3 1 Out-of-frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Seq+ 64251 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIPK2-FAM40B HIPK2 chr7 139288827 - FAM40B chr7 129120626 + Exonic hg19 SARC TCGA-VT-A80J-02A 3 1 Out-of-frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene 64252 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIPK2-GRM8 HIPK2 chr7 139285163 - GRM8 chr7 126249552 - Exonic hg19 LUSC TCGA-39-5011-01A 52 25 Out-of-frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q31.33 Oncogene Seq+ 64253 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIPK2-MYCBP2 HIPK2 chr7 139415731 - MYCBP2 chr13 77739526 - Exonic hg19 PRAD TCGA-VN-A88L-01A 2 2 Out-of-frame Inter-chr q34 CMGC:DYRK Tumor suppressor gene q22.3 Seq+ 64254 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIPK2-PARP12 HIPK2 chr7 139415731 - PARP12 chr7 139726148 - Exonic hg19 UCEC TCGA-A5-A2K4-01A 128 53 In-Frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Seq+ 64255 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIPK2-PARP12 HIPK2 chr7 139415731 - PARP12 chr7 139728488 - Exonic hg19 UCEC TCGA-KP-A3W4-01A 185 135 In-Frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Seq+ 64256 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIPK2-TMEM130 HIPK2 chr7 139305147 - TMEM130 chr7 98461023 - Exonic hg19 BLCA TCGA-GC-A3YS-01A 8 3 Out-of-frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q22.1 Seq+ 64257 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIPK3-CAT HIPK3 chr11 33373811 - CAT chr11 34470739 + Exonic hg19 LUAD TCGA-55-8510-01A 5 3 In-Frame Intra-chr p13 CMGC:DYRK p13 Tumor suppressor gene Seq+ 64258 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIPK3-DPAGT1 HIPK3 chr11 33279435 - DPAGT1 chr11 118971118 - Exonic hg19 MESO TCGA-TS-A8AY-01A 15 2 5'UTR-CDS Intra-chr p13 CMGC:DYRK q23.3 Seq+ 64259 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIPK3-GYLTL1B HIPK3 chr11 33279435 - GYLTL1B chr11 45947773 + Exonic hg19 LUSC TCGA-43-6771-01A 331 203 5'UTR-CDS Intra-chr p13 CMGC:DYRK Seq+ 64260 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIPK3-TOLLIP HIPK3 chr11 33279435 - TOLLIP chr11 1317024 - Exonic hg19 BRCA TCGA-BH-A0DD-01A 7 3 5'UTR-CDS Intra-chr p13 CMGC:DYRK p15.5 Seq+ 64261 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIRA-ADAM2 HIRA chr22 19393309 - ADAM2 chr8 39627094 - Exonic hg19 LUAD TCGA-44-8117-01A 11 4 Out-of-frame Inter-chr q11.21 Tumor suppressor gene Seq+ 64262 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIRA-BCL2L13 HIRA chr22 19418963 - BCL2L13 chr22 18209443 + Exonic hg19 HNSC TCGA-CV-7255-01A 19 24 Out-of-frame Intra-chr q11.21 Tumor suppressor gene q11.21 Seq+ 64263 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIRA-CABIN1 HIRA chr22 19371143 - CABIN1 chr22 24560368 + Exonic hg19 BRCA TCGA-BH-A0AU-01A 9 2 Out-of-frame Intra-chr q11.21 Tumor suppressor gene Seq+ 64264 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIRA-NSMCE2 HIRA chr22 19418963 - NSMCE2 chr8 126369461 + Exonic hg19 SARC TCGA-X6-A8C6-01A 10 8 In-Frame Inter-chr q11.21 Tumor suppressor gene q24.13 Seq+ 64265 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIRA-ZBTB16 HIRA chr22 19384310 - ZBTB16 chr11 114027059 + Exonic hg19 LGG TCGA-HT-7686-01A 3 7 Out-of-frame Inter-chr q11.21 Tumor suppressor gene q23.2 Tumor suppressor gene Transcription factor Seq+ 64266 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIST1H2AC-LHFPL2 HIST1H2AC chr6 26124977 - LHFPL2 chr5 77860694 - Exonic hg19 KIRC TCGA-CJ-5681-01A 24 31 3'UTR-5'UTR Inter-chr p22.2 q14.1 Seq+ 64267 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIST1H2AC-SLC17A4 HIST1H2AC chr6 26124977 - SLC17A4 chr6 25778154 + Exonic hg19 BRCA TCGA-A8-A09N-01A 26 17 3'UTR-CDS Intra-chr p22.2 p22.2 Seq+ 64268 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIST1H2AC-TNFRSF21 HIST1H2AC chr6 26124977 - TNFRSF21 chr6 47254331 - Exonic hg19 SKCM TCGA-FS-A1ZT-06A 30 10 3'UTR-CDS Intra-chr p22.2 p12.3 Seq+ 64269 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIST1H2BD-MDN1 HIST1H2BD chr6 26158787 - MDN1 chr6 90360566 - Exonic hg19 STAD TCGA-VQ-A8E2-01A 3 6 3'UTR-CDS Intra-chr p22.2 q15 Seq+ 64270 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIST1H3D-HIST1H2BD HIST1H3D chr6 26199087 - HIST1H2BD chr6 26171203 + Exonic hg19 CESC TCGA-C5-A8XH-01A 2 1 5'UTR-3'UTR Intra-chr p22.2 p22.2 64271 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIST2H2BE-NDUFV1 HIST2H2BE chr1 149856010 - NDUFV1 chr11 67375697 + Exonic hg19 PRAD TCGA-G9-6371-01A 2 14 3'UTR-CDS Inter-chr q21.2 q13.2 64272 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIVEP1-DST HIVEP1 chr6 12136125 - DST chr6 56325052 - Exonic hg19 BRCA TCGA-LL-A740-01A 15 9 Out-of-frame Intra-chr p24.1 Tumor suppressor gene Transcription factor p12.1 Oncogene Seq+ 64273 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIVEP1-MAPK1 HIVEP1 chr6 12136125 - MAPK1 chr22 22123609 - Exonic hg19 LUAD TCGA-55-6978-01A 3 3 Out-of-frame Inter-chr p24.1 Tumor suppressor gene Transcription factor q11.22 Oncogene 64274 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIVEP1-OFCC1 HIVEP1 chr6 12009108 - OFCC1 chr6 10159732 - Exonic hg19 BRCA TCGA-A2-A0CX-01A 7 19 Out-of-frame Intra-chr p24.1 Tumor suppressor gene Transcription factor p24.3 Seq+ 64275 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIVEP1-PTCRA HIVEP1 chr6 12015901 - PTCRA chr6 42890765 + Exonic hg19 LIHC TCGA-4R-AA8I-01A 23 25 In-Frame Intra-chr p24.1 Tumor suppressor gene Transcription factor p21.1 Seq+ 64276 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIVEP2-AHI1 HIVEP2 chr6 143158072 - AHI1 chr6 135639754 - Exonic hg19 BLCA TCGA-DK-AA6P-01A 4 10 5'UTR-CDS Intra-chr q24.2 Transcription factor q23.3 Seq+ 64277 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIVEP2-C12orf28 HIVEP2 chr6 143158072 - C12orf28 chr12 70320351 + Exonic hg19 SARC TCGA-DX-AB2F-01A 14 8 Out-of-frame Inter-chr q24.2 Transcription factor 64278 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIVEP2-MAP7 HIVEP2 chr6 143158072 - MAP7 chr6 136742937 - Exonic hg19 SARC TCGA-DX-A48N-01A 11 8 5'UTR-5'UTR Intra-chr q24.2 Transcription factor q23.3 Seq+ 64279 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIVEP3-ASCC3 HIVEP3 chr1 42094420 - ASCC3 chr6 101054964 - Exonic hg19 BRCA TCGA-BH-A1F0-01A 7 4 5'UTR-CDS Inter-chr p34.2 Tumor suppressor gene Transcription factor q16.3 Seq+ 64280 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIVEP3-C1orf168 HIVEP3 chr1 42384084 - C1orf168 chr1 57233611 - Exonic hg19 SKCM TCGA-EE-A2GL-06A 7 9 5'UTR-CDS Intra-chr p34.2 Tumor suppressor gene Transcription factor p32.2 Seq+ 64281 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIVEP3-CREB3L4 HIVEP3 chr1 42166587 - CREB3L4 chr1 153945671 + Exonic hg19 BRCA TCGA-BH-A18J-01A 13 8 5'UTR-5'UTR Intra-chr p34.2 Tumor suppressor gene Transcription factor q21.3 Transcription factor Seq+ 64282 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIVEP3-DOT1L HIVEP3 chr1 42094420 - DOT1L chr19 2180712 + Exonic hg19 SKCM TCGA-EB-A42Z-01A 13 3 5'UTR-CDS Inter-chr p34.2 Tumor suppressor gene Transcription factor p13.3 Oncogene Transcription factor Seq+ 64283 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIVEP3-RPH3AL HIVEP3 chr1 41984073 - RPH3AL chr17 171206 - Exonic hg19 HNSC TCGA-BB-A5HU-01A 2 1 Out-of-frame Inter-chr p34.2 Tumor suppressor gene Transcription factor 64284 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HIVEP3-ZMYND12 HIVEP3 chr1 42384084 - ZMYND12 chr1 42902214 - Exonic hg19 BLCA TCGA-BT-A3PK-01A 2 3 5'UTR-CDS Intra-chr p34.2 Tumor suppressor gene Transcription factor p34.2 Seq+ 64285 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HK1-CTNNA3 HK1 chr10 71078766 - CTNNA3 chr10 68535282 - Exonic hg19 PRAD TCGA-EJ-8469-01A 9 3 In-Frame Intra-chr q22.1 q21.3 Tumor suppressor gene Seq+ 64286 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HK2-ONECUT3 HK2 chr2 75101576 - ONECUT3 chr19 1775152 + Exonic hg19 OV TCGA-09-1662-01A 3 1 Out-of-frame Inter-chr p12 p13.3 Transcription factor Seq+ 64287 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HKDC1-SUPV3L1 HKDC1 chr10 71010408 - SUPV3L1 chr10 70951411 + Exonic hg19 STAD TCGA-VQ-AA6D-01A 2 8 In-Frame Intra-chr q22.1 q22.1 Seq+ 64288 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HKR1-ATP1A3 HKR1 chr19 37815167 - ATP1A3 chr19 42492714 - Exonic hg19 OV TCGA-25-1321-01A 10 4 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.2 Seq+ 64289 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HKR1-BLVRB HKR1 chr19 37815167 - BLVRB chr19 40964452 - Exonic hg19 LGG TCGA-E1-A7YU-01A 12 23 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.2 Seq+ 64290 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HKR1-CEACAM7 HKR1 chr19 37838774 - CEACAM7 chr19 42191152 - Exonic hg19 ESCA TCGA-L5-A891-01A 4 10 In-Frame Intra-chr q13.12 Transcription factor Seq+ 64291 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HKR1-FECH HKR1 chr19 37838774 - FECH chr18 55218606 - Exonic hg19 PRAD TCGA-EJ-5514-01A 4 3 Out-of-frame Inter-chr q13.12 Transcription factor q21.31 Seq+ 64292 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HKR1-PPP2R3A HKR1 chr19 37815167 - PPP2R3A chr3 135719901 + Exonic hg19 LUAD TCGA-55-A4DF-01A 2 2 5'UTR-5'UTR Inter-chr q13.12 Transcription factor q22.2 64293 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLA-A-KIFC3 HLA-A chr6 29913617 - KIFC3 chr16 57805349 - Exonic hg19 SKCM TCGA-EE-A2GD-06A 2 2 Out-of-frame Inter-chr p22.1 q21 64294 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLA-B-CBS HLA-B chr6 31321649 - CBS chr21 44476011 - Exonic hg19 UCEC TCGA-AX-A3G3-01A 2 57 Out-of-frame Inter-chr q22.3 64295 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLA-B-CCT5 HLA-B chr6 31321649 - CCT5 chr5 10250033 + Exonic hg19 KIRC TCGA-B0-5706-01A 2 5 Out-of-frame Inter-chr p15.2 64296 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLA-B-CCT5 HLA-B chr6 31321649 - CCT5 chr5 10250033 + Exonic hg19 KIRC TCGA-CZ-5455-01A 2 1 Out-of-frame Inter-chr p15.2 64297 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLA-B-CCT5 HLA-B chr6 31321649 - CCT5 chr5 10250033 + Exonic hg19 CESC TCGA-LP-A5U3-01A 2 17 Out-of-frame Inter-chr p15.2 64298 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLA-B-CFB HLA-B chr6 31321649 - CFB chr6 31913427 + Exonic hg19 MESO TCGA-ZN-A9VO-01A 4 1 Out-of-frame Intra-chr 64299 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLA-B-CLCN3 HLA-B chr6 31321649 - CLCN3 chr4 170623929 + Exonic hg19 KIRC TCGA-AK-3444-01A 2 2 Out-of-frame Inter-chr q33 64300 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLA-B-EIF2AK2 HLA-B chr6 31321649 - EIF2AK2 chr2 37342384 - Exonic hg19 BLCA TCGA-GC-A3WC-01A 2 27 Out-of-frame Inter-chr p22.2 64301 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLA-B-IQCE HLA-B chr6 31321649 - IQCE chr7 2641075 + Exonic hg19 UVM TCGA-V4-A9EH-01A 2 13 Out-of-frame Inter-chr p22.3 64302 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLA-B-RNASEH2B HLA-B chr6 31321649 - RNASEH2B chr13 51530588 + Exonic hg19 THCA TCGA-GE-A2C6-01A 2 12 Out-of-frame Inter-chr q14.3 64303 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLA-B-SNW1 HLA-B chr6 31321649 - SNW1 chr14 78189203 - Exonic hg19 BRCA TCGA-BH-A1FE-06A 2 6 Out-of-frame Inter-chr q24.3 64304 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLA-B-UBR5 HLA-B chr6 31321759 - UBR5 chr8 103354894 - Exonic hg19 BRCA TCGA-S3-AA0Z-01A 2 1 Out-of-frame Inter-chr q22.3 64305 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLA-C-CFB HLA-C chr6 31236528 - CFB chr6 31913427 + Exonic hg19 BRCA TCGA-BH-A0B6-01A 4 2 Out-of-frame Intra-chr 64306 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLA-C-CFB HLA-C chr6 31236526 - CFB chr6 31913427 + Exonic hg19 CESC TCGA-VS-A9UO-01A 3 1 Out-of-frame Intra-chr 64307 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLA-C-DDX21 HLA-C chr6 31236526 - DDX21 chr10 70723858 + Exonic hg19 PRAD TCGA-G9-6371-01A 2 1 Out-of-frame Inter-chr q22.1 64308 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLA-C-EIF2AK2 HLA-C chr6 31236528 - EIF2AK2 chr2 37342384 - Exonic hg19 BLCA TCGA-DK-A6B2-01A 2 86 Out-of-frame Inter-chr p22.2 64309 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLA-C-FADS2 HLA-C chr6 31236526 - FADS2 chr11 61588853 + Exonic hg19 PRAD TCGA-CH-5761-01A 2 1 Out-of-frame Inter-chr q12.2 64310 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLA-C-FOXP1 HLA-C chr6 31236528 - FOXP1 chr3 71007472 - Exonic hg19 LUAD TCGA-78-7149-01A 2 56 Out-of-frame Inter-chr p13 64311 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLA-C-TCOF1 HLA-C chr6 31236528 - TCOF1 chr5 149777917 + Exonic hg19 HNSC TCGA-CV-6961-01A 2 1 Out-of-frame Inter-chr q32 64312 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLA-C-TYK2 HLA-C chr6 31236528 - TYK2 chr19 10491352 - Exonic hg19 THCA TCGA-E8-A417-01A 2 54 Out-of-frame Inter-chr p13.2 64313 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLA-DPA1-SQSTM1 HLA-DPA1 chr6 33032794 - SQSTM1 chr5 179250858 + Exonic hg19 PAAD TCGA-IB-7654-01A 2 7 Out-of-frame Inter-chr q35.3 64314 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLA-DPA1-TRIP12 HLA-DPA1 chr6 33032794 - TRIP12 chr2 230662547 - Exonic hg19 SKCM TCGA-ER-A1A1-06A 2 24 Out-of-frame Inter-chr q36.3 64315 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLA-DRA-EEA1 HLA-DRA chr6 32412823 - EEA1 chr12 93229203 - Exonic hg19 SKCM TCGA-EB-A44Q-06A 2 9 Out-of-frame Inter-chr q22 64316 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLA-DRA-SNW1 HLA-DRA chr6 32412823 - SNW1 chr14 78189203 - Exonic hg19 SKCM TCGA-EE-A29T-06A 2 3 Out-of-frame Inter-chr q24.3 64317 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLCS-CD53 HLCS chr21 38308749 - CD53 chr1 111434014 + Exonic hg19 BRCA TCGA-E2-A158-01A 2 2 CDS-5'UTR Inter-chr q22.13 p13.3 Seq+ 64318 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLCS-GRIK1 HLCS chr21 38269160 - GRIK1 chr21 30971257 - Exonic hg19 LUAD TCGA-50-5944-01A 2 2 Out-of-frame Intra-chr q22.13 q21.3 Seq+ 64319 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLCS-STRA8 HLCS chr21 38269160 - STRA8 chr7 134925271 + Exonic hg19 LUAD TCGA-MN-A4N1-01A 9 2 Out-of-frame Inter-chr q22.13 q33 Seq+ 64320 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLCS-TSPEAR HLCS chr21 38269160 - TSPEAR chr21 45987889 - Exonic hg19 CESC TCGA-C5-A7CJ-01A 2 3 Out-of-frame Intra-chr q22.13 q22.3 Seq+ 64321 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLCS-YBEY HLCS chr21 38302551 - YBEY chr21 47711248 + Exonic hg19 LGG TCGA-DU-7010-01A 17 9 In-Frame Intra-chr q22.13 q22.3 Seq+ 64322 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HLTF-WWTR1 HLTF chr3 148777505 - WWTR1 chr3 149260324 - Exonic hg19 LIHC TCGA-PD-A5DF-01A 2 2 In-Frame Intra-chr q24 Tumor suppressor gene q25.1 Seq+ 64323 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMBOX1-BNIP3L HMBOX1 chr8 28876430 - BNIP3L chr8 26362823 + Exonic hg19 SARC TCGA-DX-A1L0-01A 100 31 Out-of-frame Intra-chr p21.1 Transcription factor p21.2 Tumor suppressor gene Seq+ 64324 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMBOX1-ELP3 HMBOX1 chr8 28748195 - ELP3 chr8 27995215 + Exonic hg19 STAD TCGA-BR-4357-01A 5 10 5'UTR-CDS Intra-chr p21.1 Transcription factor p21.1 64325 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMBOX1-FSTL5 HMBOX1 chr8 28837673 - FSTL5 chr4 162508727 - Exonic hg19 SARC TCGA-DX-AB2O-01A 11 6 Out-of-frame Inter-chr p21.1 Transcription factor q32.2 Seq+ 64326 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMBOX1-MCM3 HMBOX1 chr8 28748195 - MCM3 chr6 52134024 - Exonic hg19 SARC TCGA-DX-A6YR-01A 31 31 5'UTR-CDS Inter-chr p21.1 Transcription factor p12.2 Seq+ 64327 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMBOX1-PNOC HMBOX1 chr8 28748195 - PNOC chr8 28186652 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 85 126 5'UTR-5'UTR Intra-chr p21.1 Transcription factor p21.1 Seq+ 64328 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMBOX1-SCARA3 HMBOX1 chr8 28748536 - SCARA3 chr8 27507219 + Exonic hg19 LUAD TCGA-38-4630-01A 9 3 5'UTR-CDS Intra-chr p21.1 Transcription factor p21.1 Seq+ 64329 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMCN1-RNF2 HMCN1 chr1 185704179 - RNF2 chr1 185060711 + Exonic hg19 BRCA TCGA-AR-A256-01A 2 2 Out-of-frame Intra-chr q25.3 q25.3 Oncogene Seq+ 64330 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMCN1-ZSWIM4 HMCN1 chr1 186052093 - ZSWIM4 chr19 13910534 + Exonic hg19 SARC TCGA-FX-A2QS-01A 3 1 Out-of-frame Inter-chr q25.3 p13.13 Seq+ 64331 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMG20A-RCN2 HMG20A chr15 77713346 - RCN2 chr15 77224702 + Exonic hg19 LUSC TCGA-77-7140-01A 27 15 5'UTR-CDS Intra-chr q24.3 Transcription factor q24.3 Seq+ 64332 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMG20A-SCAMP5 HMG20A chr15 77713346 - SCAMP5 chr15 75304133 + Exonic hg19 LIHC TCGA-RC-A6M3-01A 3 3 5'UTR-5'UTR Intra-chr q24.3 Transcription factor q24.2 Seq+ 64333 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMGA1-EEA1 HMGA1 chr6 34214008 - EEA1 chr12 93229203 - Exonic hg19 SKCM TCGA-D3-A2J8-06A 2 1 Out-of-frame Inter-chr p21.31 Transcription factor q22 Transcription factor 64334 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMGA2-ARFGAP2 HMGA2 chr12 66219161 - ARFGAP2 chr11 47193884 - Exonic hg19 SARC TCGA-DX-A1L0-01A 17 14 Out-of-frame Inter-chr q14.3 Transcription factor p11.2 Seq+ 64335 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMGA2-C10orf11 HMGA2 chr12 66232349 - C10orf11 chr10 78084159 + Exonic hg19 UCEC TCGA-B5-A5OD-01A 8 7 In-Frame Inter-chr q14.3 Transcription factor Seq+ 64336 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMGA2-C1orf87 HMGA2 chr12 66232349 - C1orf87 chr1 60463488 - Exonic hg19 SARC TCGA-DX-A6BE-01A 4 1 In-Frame Inter-chr q14.3 Transcription factor p32.1 Seq+ 64337 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMGA2-DAB1 HMGA2 chr12 66232349 - DAB1 chr1 57463801 - Exonic hg19 SARC TCGA-DX-A6BG-01A 348 220 CDS-3'UTR Inter-chr q14.3 Transcription factor p32.1 Seq+ 64338 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMGA2-GABRA3 HMGA2 chr12 66232349 - GABRA3 chrX 151393317 - Exonic hg19 SKCM TCGA-GN-A26D-06A 22 12 Out-of-frame Inter-chr q14.3 Transcription factor q28 Seq+ 64339 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMGA2-KALRN HMGA2 chr12 66345195 - KALRN chr3 124281690 + Exonic hg19 UCEC TCGA-A5-A1OH-01A 32 13 In-Frame Inter-chr q14.3 Transcription factor q21.1 Seq+ 64340 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMGA2-NELL2 HMGA2 chr12 66232349 - NELL2 chr12 45097637 - Exonic hg19 SARC TCGA-3B-A9HL-01A 23 12 Out-of-frame Intra-chr q14.3 Transcription factor q12 Seq+ 64341 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMGA2-NR2C1 HMGA2 chr12 66232349 - NR2C1 chr12 95461167 - Exonic hg19 SARC TCGA-DX-A3M1-01A 6 42 CDS-5'UTR Intra-chr q14.3 Transcription factor q22 Transcription factor Seq+ 64342 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMGA2-NUP107 HMGA2 chr12 66232349 - NUP107 chr12 69109407 + Exonic hg19 GBM TCGA-06-0187-01A 3 6 In-Frame Intra-chr q14.3 Transcription factor q15 Seq+ 64343 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMGA2-PCBP2 HMGA2 chr12 66232349 - PCBP2 chr12 53856277 + Exonic hg19 SARC TCGA-DX-AB2G-01A 42 24 In-Frame Intra-chr q14.3 Transcription factor q13.13 Seq+ 64344 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMGA2-PPFIA2 HMGA2 chr12 66232349 - PPFIA2 chr12 81851645 - Exonic hg19 SARC TCGA-DX-A2J4-01A 2 1 In-Frame Intra-chr q14.3 Transcription factor q21.31 64345 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMGA2-SARNP HMGA2 chr12 66345195 - SARNP chr12 56146624 - Exonic hg19 SARC TCGA-DX-A2J1-01A 791 585 3'UTR-3'UTR Intra-chr q14.3 Transcription factor q13.2 Seq+ 64346 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMGCL-S100PBP HMGCL chr1 24130890 - S100PBP chr1 33321525 + Exonic hg19 LGG TCGA-DB-A64O-01A 3 1 Out-of-frame Intra-chr p36.11 p35.1 64347 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMGCS1-OXCT1 HMGCS1 chr5 43307868 - OXCT1 chr5 41862852 - Exonic hg19 LGG TCGA-E1-5304-01A 10 9 5'UTR-CDS Intra-chr p12 p13.1 Seq+ 64348 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMGCS1-SLC38A9 HMGCS1 chr5 43292576 - SLC38A9 chr5 54965707 - Exonic hg19 LIHC TCGA-DD-A3A5-01A 49 33 In-Frame Intra-chr p12 q11.2 Seq+ 64349 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMGCS1-UNC13A HMGCS1 chr5 43292950 - UNC13A chr19 17756920 - Exonic hg19 BLCA TCGA-FD-A62P-01A 13 9 In-Frame Inter-chr p12 p13.11 Seq+ 64350 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMGXB3-CAPN1 HMGXB3 chr5 149380742 - CAPN1 chr11 64972154 + Exonic hg19 HNSC TCGA-CN-5355-01A 41 14 5'UTR-5'UTR Inter-chr q32 q13.1 Seq+ 64351 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMGXB3-PAM HMGXB3 chr5 149386210 - PAM chr5 102201527 + Exonic hg19 SKCM TCGA-EB-A5KH-06A 12 9 CDS-5'UTR Intra-chr q32 q21.1 Seq+ 64352 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMGXB3-PPARGC1B HMGXB3 chr5 149412166 - PPARGC1B chr5 149227021 + Exonic hg19 BLCA TCGA-K4-A3WU-01B 4 2 Out-of-frame Intra-chr q32 q32 Seq+ 64353 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMGXB4-MGMT HMGXB4 chr22 35653550 - MGMT chr10 131506159 + Exonic hg19 SKCM TCGA-W3-AA1R-06A 22 228 5'UTR-CDS Inter-chr q12.3 q26.3 Seq+ 64354 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMHA1-ABCA7 HMHA1 chr19 1083352 - ABCA7 chr19 1061781 + Exonic hg19 CESC TCGA-C5-A7CO-01A 2 3 In-Frame Intra-chr p13.3 64355 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMHA1-GRIN3B HMHA1 chr19 1067494 - GRIN3B chr19 1007627 + Exonic hg19 CESC TCGA-VS-A8EC-01A 2 1 In-Frame Intra-chr p13.3 64356 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HMOX2-C16orf5 HMOX2 chr16 4526488 - C16orf5 chr16 4564665 - Exonic hg19 LUAD TCGA-78-8660-01A 9 9 5'UTR-5'UTR Intra-chr p13.3 64357 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HN1-GGA3 HN1 chr17 73142761 - GGA3 chr17 73242877 - Exonic hg19 BRCA TCGA-HN-A2NL-01A 12 23 In-Frame Intra-chr q25.1 Seq+ 64358 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNF1B-NOTCH1 HNF1B chr17 36099431 - NOTCH1 chr9 139396940 - Exonic hg19 KIRP TCGA-BQ-7053-01A 1056 605 In-Frame Inter-chr q12 Transcription factor q34.3 Oncogene Tumor suppressor gene Seq+ 64359 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNF4A-MYBL2 HNF4A chr20 43036115 - MYBL2 chr20 42340128 + Exonic hg19 SARC TCGA-DX-A1KX-01A 8 5 Out-of-frame Intra-chr q13.12 Tumor suppressor gene Transcription factor q13.12 Transcription factor Seq+ 64360 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPA2B1-CANT1 HNRNPA2B1 chr7 26236208 - CANT1 chr17 76994045 - Exonic hg19 PRAD TCGA-HC-7748-01A 2 4 CDS-5'UTR Inter-chr p15.2 q25.3 64361 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPA2B1-CLASP2 HNRNPA2B1 chr7 26231467 - CLASP2 chr3 33602368 - Exonic hg19 KICH TCGA-KL-8339-01A 2 8 Out-of-frame Inter-chr p15.2 p22.3 64362 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPA2B1-DSP HNRNPA2B1 chr7 26231467 - DSP chr6 7575528 + Exonic hg19 LUSC TCGA-22-0944-01A 3 1 3'UTR-CDS Inter-chr p15.2 p24.3 Tumor suppressor gene 64363 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPA2B1-RABEP1 HNRNPA2B1 chr7 26231467 - RABEP1 chr17 5283828 + Exonic hg19 HNSC TCGA-CN-6989-01A 2 10 Out-of-frame Inter-chr p15.2 p13.2 64364 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPA2B1-SIAE HNRNPA2B1 chr7 26231467 - SIAE chr11 124543777 - Exonic hg19 LUAD TCGA-71-6725-01A 2 44 3'UTR-5'UTR Inter-chr p15.2 q24.2 64365 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPA2B1-SIAE HNRNPA2B1 chr7 26231464 - SIAE chr11 124543777 - Exonic hg19 STAD TCGA-HU-8610-01A 2 1 3'UTR-5'UTR Inter-chr p15.2 q24.2 64366 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPAB-SAMM50 HNRNPAB chr5 177634226 - SAMM50 chr22 44371935 + Exonic hg19 SKCM TCGA-BF-A5EQ-01A 369 161 In-Frame Inter-chr q35.3 q13.31 Seq+ 64367 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPC-CHD8 HNRNPC chr14 21698478 - CHD8 chr14 21854335 - Exonic hg19 STAD TCGA-BR-A4QI-01A 3 59 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 64368 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPC-PAPOLA HNRNPC chr14 21737457 - PAPOLA chr14 97022184 + Exonic hg19 BLCA TCGA-XF-AAMW-01A 31 11 5'UTR-CDS Intra-chr q11.2 q32.2 Seq+ 64369 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPD-C4orf22 HNRNPD chr4 83292681 - C4orf22 chr4 81865964 + Exonic hg19 PRAD TCGA-HC-7820-01A 12 9 In-Frame Intra-chr q21.22 q21.21 Seq+ 64370 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPD-PRKG2 HNRNPD chr4 83292681 - PRKG2 chr4 82031765 - Exonic hg19 MESO TCGA-TS-A8AF-01A 10 8 Out-of-frame Intra-chr q21.22 q21.21 Seq+ 64371 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPF-ATAD1 HNRNPF chr10 43904579 - ATAD1 chr10 89574369 - Exonic hg19 BRCA TCGA-AC-A3EH-01A 19 38 5'UTR-5'UTR Intra-chr q11.21 Seq+ 64372 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPF-ZNF569 HNRNPF chr10 43904579 - ZNF569 chr19 37956375 - Exonic hg19 OV TCGA-13-0916-01A 2 30 5'UTR-5'UTR Inter-chr q11.21 q13.12 Transcription factor Seq+ 64373 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPH1-ERG HNRNPH1 chr5 179047893 - ERG chr21 39755845 - Exonic hg19 LAML TCGA-AB-2814-03A 178 208 In-Frame Inter-chr q35.3 q22.2 Oncogene Transcription factor Seq+ 64374 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPH1-INSR HNRNPH1 chr5 179044990 - INSR chr19 7184648 - Exonic hg19 SARC TCGA-3B-A9HS-01A 51 41 In-Frame Inter-chr q35.3 p13.2 TK:InsR Seq+ 64375 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPH1-RNF130 HNRNPH1 chr5 179042547 - RNF130 chr5 179382669 - Exonic hg19 BRCA TCGA-E2-A1LE-01A 41 14 3'UTR-CDS Intra-chr q35.3 q35.3 Seq+ 64376 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPH3-ATAD1 HNRNPH3 chr10 70091973 - ATAD1 chr10 89574369 - Exonic hg19 LUAD TCGA-95-7562-01A 10 14 5'UTR-5'UTR Intra-chr q21.3 Seq+ 64377 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPH3-KLK1 HNRNPH3 chr10 70102944 - KLK1 chr19 51327043 - Exonic hg19 KICH TCGA-KM-8441-01A 2 1 3'UTR-5'UTR Inter-chr q21.3 q13.33 64378 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPH3-SLC29A3 HNRNPH3 chr10 70099312 - SLC29A3 chr10 73121711 + Exonic hg19 STAD TCGA-FP-8631-01A 14 42 Out-of-frame Intra-chr q21.3 q22.1 Seq+ 64379 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPL-ACTN4 HNRNPL chr19 39340340 - ACTN4 chr19 39205109 + Exonic hg19 OV TCGA-23-1107-01A 2 10 In-Frame Intra-chr Seq+ 64380 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPL-SIRT2 HNRNPL chr19 39337956 - SIRT2 chr19 39372131 - Exonic hg19 KIRC TCGA-B0-5116-01A 11 16 Out-of-frame Intra-chr Tumor suppressor gene Seq+ 64381 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPM-CERS4 HNRNPM chr19 8509995 - CERS4 chr19 8315960 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 14 5 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 64382 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPM-DMD HNRNPM chr19 8530399 - DMD chrX 31986631 - Exonic hg19 SARC TCGA-SI-A71Q-01A 38 27 In-Frame Inter-chr p13.2 p21.1 Tumor suppressor gene Seq+ 64383 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPM-MARCH2 HNRNPM chr19 8509995 - 2019_ 3_ 2_ chr19 8486673 + Exonic hg19 LIHC TCGA-2Y-A9H1-01A 3 1 Out-of-frame Intra-chr p13.2 p13.2 64384 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPM-MCOLN1 HNRNPM chr19 8527465 - MCOLN1 chr19 7592406 + Exonic hg19 UCS TCGA-N8-A4PN-01A 58 35 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 64385 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPM-PC HNRNPM chr19 8509995 - PC chr11 66721907 - Exonic hg19 HNSC TCGA-IQ-7631-01A 5 2 CDS-5'UTR Inter-chr p13.2 q13.2 64386 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPM-SLC25A23 HNRNPM chr19 8509995 - SLC25A23 chr19 6438545 - Exonic hg19 LUAD TCGA-75-5125-01A 119 54 Out-of-frame Intra-chr p13.2 p13.3 Seq+ 64387 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPR-E2F2 HNRNPR chr1 23660011 - E2F2 chr1 23850980 - Exonic hg19 LUSC TCGA-94-8035-01A 7 6 In-Frame Intra-chr Tumor suppressor gene Transcription factor Seq+ 64388 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPUL1-ATG10 HNRNPUL1 chr19 41800591 - ATG10 chr5 81548381 + Exonic hg19 PRAD TCGA-EJ-7321-01A 8 7 In-Frame Inter-chr q13.2 q14.1 Seq+ 64389 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPUL1-CLIP3 HNRNPUL1 chr19 41774250 - CLIP3 chr19 36523317 - Exonic hg19 ACC TCGA-OR-A5J1-01A 10 1 CDS-5'UTR Intra-chr q13.2 q13.12 Seq+ 64390 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPUL1-CNN1 HNRNPUL1 chr19 41800591 - CNN1 chr19 11651891 + Exonic hg19 BLCA TCGA-XF-AAMT-01A 48 18 In-Frame Intra-chr q13.2 p13.2 Tumor suppressor gene Seq+ 64391 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPUL1-DAB1 HNRNPUL1 chr19 41770598 - DAB1 chr1 58349834 - Exonic hg19 MESO TCGA-ZN-A9VP-01A 10 6 5'UTR-5'UTR Inter-chr q13.2 p32.1 Seq+ 64392 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPUL1-SLC8A2 HNRNPUL1 chr19 41787180 - SLC8A2 chr19 47960851 - Exonic hg19 PRAD TCGA-EJ-5518-01A 65 63 In-Frame Intra-chr q13.2 q13.32 Seq+ 64393 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRNPUL2-TTC9C HNRNPUL2 chr11 62494091 - TTC9C chr11 62502854 + Exonic hg19 BRCA TCGA-BH-A1F0-01A 9 5 In-Frame Intra-chr q12.3 q12.3 Seq+ 64394 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRPLL-NFATC3 HNRPLL chr2 38812786 - NFATC3 chr16 68191772 + Exonic hg19 CESC TCGA-EK-A2RJ-01A 13 9 In-Frame Inter-chr q22.1 Transcription factor Seq+ 64395 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HNRPLL-SERTAD2 HNRPLL chr2 38818672 - SERTAD2 chr2 64864009 - Exonic hg19 LGG TCGA-DU-A7TJ-01A 11 13 CDS-5'UTR Intra-chr p14 64396 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOMER1-MAST2 HOMER1 chr5 78808593 - MAST2 chr1 46348036 + Exonic hg19 LGG TCGA-HT-7882-01A 5 2 Out-of-frame Inter-chr q14.1 p34.1 AGC:MAST 64397 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOMER2-AC024270.1 HOMER2 chr15 83561437 - AC024270.1 chr15 83820113 - Exonic hg19 PRAD TCGA-KK-A5A1-01A 43 19 Out-of-frame Intra-chr q25.2 Tumor suppressor gene q25.2 64398 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOOK1-FGGY HOOK1 chr1 60294524 - FGGY chr1 60223603 + Exonic hg19 UCEC TCGA-B5-A0JN-01A 2 5 In-Frame Intra-chr p32.1 p32.1 Seq+ 64399 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOOK2-MAST1 HOOK2 chr19 12881746 - MAST1 chr19 12958662 + Exonic hg19 OV TCGA-09-1668-01B 7 1 Out-of-frame Intra-chr p13.13 p13.13 AGC:MAST Seq+ 64400 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOOK2-NFIX HOOK2 chr19 12885483 - NFIX chr19 13135835 + Exonic hg19 BRCA TCGA-S3-AA0Z-01A 60 49 In-Frame Intra-chr p13.13 p13.13 Transcription factor Seq+ 64401 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOOK2-RTBDN HOOK2 chr19 12885483 - RTBDN chr19 12937685 - Exonic hg19 LUSC TCGA-18-3415-01A 300 236 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 64402 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOOK3-BAALC HOOK3 chr8 42780772 - BAALC chr8 104225147 + Exonic hg19 BLCA TCGA-K4-A6MB-01A 104 65 Out-of-frame Intra-chr p11.21 Oncogene q22.3 Seq+ 64403 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOOK3-GTF2E2 HOOK3 chr8 42798588 - GTF2E2 chr8 30492640 - Exonic hg19 STAD TCGA-FP-8099-01A 6 21 In-Frame Intra-chr p11.21 Oncogene p12 Seq+ 64404 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOOK3-IKBKB HOOK3 chr8 42798588 - IKBKB chr8 42162705 + Exonic hg19 BRCA TCGA-A2-A0D1-01A 41 19 In-Frame Intra-chr p11.21 Oncogene p11.21 Oncogene Seq+ 64405 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOOK3-MTFR1 HOOK3 chr8 42852780 - MTFR1 chr8 66683182 + Exonic hg19 BRCA TCGA-BH-A0HX-01A 8 6 Out-of-frame Intra-chr p11.21 Oncogene q13.1 Seq+ 64406 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOOK3-PLEKHA2 HOOK3 chr8 42798588 - PLEKHA2 chr8 38826110 + Exonic hg19 BRCA TCGA-E2-A15M-01A 4 3 Out-of-frame Intra-chr p11.21 Oncogene p11.22 64407 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOOK3-TADA2A HOOK3 chr8 42873637 - TADA2A chr17 35830504 + Exonic hg19 BRCA TCGA-AR-A1AT-01A 6 3 Out-of-frame Inter-chr p11.21 Oncogene q12 Seq+ 64408 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOOK3-TGS1 HOOK3 chr8 42761401 - TGS1 chr8 56695307 + Exonic hg19 COAD TCGA-CA-6715-01A 8 7 In-Frame Intra-chr p11.21 Oncogene q12.1 Tumor suppressor gene Seq+ 64409 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOOK3-TM2D2 HOOK3 chr8 42761401 - TM2D2 chr8 38853212 - Exonic hg19 LUAD TCGA-50-5933-01A 6 5 CDS-5'UTR Intra-chr p11.21 Oncogene p11.22 Seq+ 64410 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOOK3-TM2D2 HOOK3 chr8 42752331 - TM2D2 chr8 38853313 - Exonic hg19 BRCA TCGA-A2-A0EW-01A 4 3 CDS-5'UTR Intra-chr p11.21 Oncogene p11.22 Seq+ 64411 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOPX-PDCL2 HOPX chr4 57547421 - PDCL2 chr4 56448404 - Exonic hg19 GBM TCGA-06-2559-01A 22 116 5'UTR-CDS Intra-chr q12 Tumor suppressor gene q12 Seq+ 64412 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOXA10-CSN1S1 HOXA10 chr7 27212968 - CSN1S1 chr4 70798262 + Exonic hg19 ESCA TCGA-2H-A9GG-01A 8 24 CDS-5'UTR Inter-chr p15.2 Transcription factor q13.3 Seq+ 64413 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOXA3-HIBADH HOXA3 chr7 27179702 - HIBADH chr7 27672064 - Exonic hg19 ESCA TCGA-R6-A6Y0-01B 4 4 5'UTR-CDS Intra-chr p15.2 Transcription factor p15.2 64414 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOXA3-KIAA0895 HOXA3 chr7 27162178 - KIAA0895 chr7 36397199 - Exonic hg19 LGG TCGA-DU-A5TY-01A 21 2 5'UTR-5'UTR Intra-chr p15.2 Transcription factor p14.2 Seq+ 64415 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOXA3-PARP8 HOXA3 chr7 27179702 - PARP8 chr5 50055477 + Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 36 15 5'UTR-CDS Inter-chr p15.2 Transcription factor q11.1 Seq+ 64416 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOXB3-FAP HOXB3 chr17 46651199 - FAP chr2 163044873 - Exonic hg19 UCEC TCGA-B5-A5OD-01A 4 6 5'UTR-CDS Inter-chr q21.32 Transcription factor q24.2 Seq+ 64417 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOXB3-TCF12 HOXB3 chr17 46651199 - TCF12 chr15 57523350 + Exonic hg19 UCEC TCGA-BK-A139-02A 2 2 5'UTR-CDS Inter-chr q21.32 Transcription factor q21.3 Oncogene Transcription factor Seq+ 64418 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOXB6-EPHA5 HOXB6 chr17 46681842 - EPHA5 chr4 66509145 - Exonic hg19 SKCM TCGA-ER-A2NE-06A 5 3 5'UTR-CDS Inter-chr q21.32 Transcription factor q13.2 Oncogene Seq+ 64419 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOXB6-PITPNC1 HOXB6 chr17 46681842 - PITPNC1 chr17 65528918 + Exonic hg19 DLBC TCGA-FF-8047-01A 15 7 5'UTR-CDS Intra-chr q21.32 Transcription factor q24.2 Seq+ 64420 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOXC10-WIBG HOXC10 chr12 54379794 - WIBG chr12 56297264 - Exonic hg19 GBM TCGA-19-2624-01A 4 12 In-Frame Intra-chr q13.13 Transcription factor 12q13.2 Seq+ 64421 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOXC6-WIBG HOXC6 chr12 54388800 - WIBG chr12 56297264 - Exonic hg19 GBM TCGA-19-2624-01A 12 36 5'UTR-CDS Intra-chr q13.13 Transcription factor 12q13.2 64422 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HOXD3-CHN1 HOXD3 chr2 177001727 - CHN1 chr2 175677210 - Exonic hg19 ESCA TCGA-L5-A4OQ-01A 2 8 5'UTR-CDS Intra-chr q31.1 Transcription factor q31.1 Seq+ 64423 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HP-EEA1 HP chr16 72094953 - EEA1 chr12 93229203 - Exonic hg19 LIHC TCGA-BC-A10W-01A 2 10 Out-of-frame Inter-chr q22.2 Tumor suppressor gene q22 Transcription factor 64424 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HP1BP3-EIF4G3 HP1BP3 chr1 21074037 - EIF4G3 chr1 21137377 - Exonic hg19 UCEC TCGA-B5-A5OE-01A 19 7 Out-of-frame Intra-chr p36.12 p36.12 Seq+ 64425 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HP1BP3-TMCO4 HP1BP3 chr1 21106305 - TMCO4 chr1 20063949 - Exonic hg19 LGG TCGA-FG-6692-01A 20 31 Out-of-frame Intra-chr p36.12 p36.13 Seq+ 64426 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HPCAL1-CPSF3 HPCAL1 chr2 10537046 - CPSF3 chr2 9607836 + Exonic hg19 BRCA TCGA-A1-A0SO-01A 28 30 5'UTR-CDS Intra-chr p25.1 p25.1 Seq+ 64427 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HPD-CYP2E1 HPD chr12 122277436 - CYP2E1 chr10 135340867 + Exonic hg19 LIHC TCGA-DD-A3A4-01A 44 1 3'UTR-5'UTR Inter-chr q24.31 q26.3 64428 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HPGD-GUCY1A3 HPGD chr4 175443095 - GUCY1A3 chr4 156629388 + Exonic hg19 BLCA TCGA-K4-A3WU-01B 31 16 Out-of-frame Intra-chr q34.1 Tumor suppressor gene q32.1 Seq+ 64429 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HPN-PPP2R5C HPN chr19 35533426 - PPP2R5C chr14 102302506 + Exonic hg19 BRCA TCGA-B6-A0RT-01A 12 7 Out-of-frame Inter-chr q13.11 q32.31 Tumor suppressor gene Seq+ 64430 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HPRT1-CTPS2 HPRT1 chrX 133609394 - CTPS2 chrX 16657366 - Exonic hg19 BRCA TCGA-AR-A24W-01A 483 374 In-Frame Intra-chr q26.2 p22.2 Seq+ 64431 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HPRT1-LRRC2 HPRT1 chrX 133620560 - LRRC2 chr3 46593100 - Exonic hg19 BLCA TCGA-BL-A0C8-01B 2 2 CDS-5'UTR Inter-chr q26.2 p21.31 64432 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HPS3-CPB1 HPS3 chr3 148847727 - CPB1 chr3 148575244 + Exonic hg19 OV TCGA-13-1495-01A 37 36 Out-of-frame Intra-chr q24 q24 Seq+ 64433 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HPS3-PHF17 HPS3 chr3 148847727 - PHF17 chr4 129752888 + Exonic hg19 BRCA TCGA-BH-A1F0-01A 2 1 CDS-5'UTR Inter-chr q24 64434 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HPS4-CABIN1 HPS4 chr22 26875231 - CABIN1 chr22 24560368 + Exonic hg19 ACC TCGA-OR-A5JY-01A 31 25 In-Frame Intra-chr q12.1 Seq+ 64435 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HPS4-UBE2L3 HPS4 chr22 26859883 - UBE2L3 chr22 21947150 + Exonic hg19 SKCM TCGA-XV-A9W2-01A 5 44 In-Frame Intra-chr q12.1 q11.21 Seq+ 64436 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HPS5-SETD5 HPS5 chr11 18318345 - SETD5 chr3 9466151 + Exonic hg19 BRCA TCGA-A8-A06U-01A 6 12 CDS-5'UTR Inter-chr p15.1 p25.3 Seq+ 64437 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HPSE2-CWF19L1 HPSE2 chr10 100903995 - CWF19L1 chr10 102003534 - Exonic hg19 LGG TCGA-FN-7833-01A 4 1 In-Frame Intra-chr q24.2 q24.31 Seq+ 64438 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HRH1-TSEN2 HRH1 chr3 11196240 - TSEN2 chr3 12531283 + Exonic hg19 BLCA TCGA-E7-A7DV-01A 3 2 5'UTR-5'UTR Intra-chr p25.3 p25.2 64439 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HS2ST1-GBP6 HS2ST1 chr1 87380843 - GBP6 chr1 89834088 + Exonic hg19 BRCA TCGA-AN-A0FZ-01A 13 5 CDS-5'UTR Intra-chr p22.3 p22.2 Seq+ 64440 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HS2ST1-NXNL2 HS2ST1 chr1 87380843 - NXNL2 chr9 91190002 + Exonic hg19 OV TCGA-09-1659-01B 2 3 CDS-3'UTR Inter-chr p22.3 q22.1 Seq+ 64441 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HS2ST1-PRDX1 HS2ST1 chr1 87380843 - PRDX1 chr1 45984726 - Exonic hg19 BRCA TCGA-A2-A0YE-01A 41 46 CDS-5'UTR Intra-chr p22.3 p34.1 Seq+ 64442 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HS2ST1-SH3GLB1 HS2ST1 chr1 87380843 - SH3GLB1 chr1 87185190 + Exonic hg19 LIHC TCGA-DD-AAEG-01A 3 3 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 64443 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HS3ST1-CNTN5 HS3ST1 chr4 11430323 - CNTN5 chr11 99426876 + Exonic hg19 KIRC TCGA-CZ-5982-01A 12 6 5'UTR-5'UTR Inter-chr p15.33 q22.1 Seq+ 64444 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HS3ST3B1-TMEM92 HS3ST3B1 chr17 14205389 - TMEM92 chr17 48355917 + Exonic hg19 SARC TCGA-FX-A3TO-01A 2 3 In-Frame Intra-chr p12 q21.33 Seq+ 64445 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HS6ST2-NPFFR2 HS6ST2 chrX 132090836 - NPFFR2 chr4 73003757 + Exonic hg19 BLCA TCGA-BT-A2LD-01A 2 2 Out-of-frame Inter-chr q26.2 q13.3 64446 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HS6ST2-ODZ1 HS6ST2 chrX 132090836 - ODZ1 chrX 123663833 - Exonic hg19 BRCA TCGA-S3-AA10-01A 2 1 In-Frame Intra-chr q26.2 64447 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HS6ST3-ACTR1A HS6ST3 chr13 96743823 - ACTR1A chr10 104241655 - Exonic hg19 PCPG TCGA-SP-A6QF-01A 2 4 Out-of-frame Inter-chr q32.1 q24.32 Seq+ 64448 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HS6ST3-EFNA5 HS6ST3 chr13 96743823 - EFNA5 chr5 106763210 - Exonic hg19 SKCM TCGA-D9-A6EA-06A 6 2 In-Frame Inter-chr q32.1 q21.3 Tumor suppressor gene 64449 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HS6ST3-FAM155A HS6ST3 chr13 96743823 - FAM155A chr13 107823134 - Exonic hg19 SARC TCGA-KD-A5QT-01A 23 25 Out-of-frame Intra-chr q32.1 q33.3 Seq+ 64450 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSD11B1L-SAFB HSD11B1L chr19 5687679 - SAFB chr19 5664033 + Exonic hg19 HNSC TCGA-CR-7374-01A 2 2 In-Frame Intra-chr p13.3 p13.3 Tumor suppressor gene Transcription factor Seq+ 64451 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSD17B11-SPARCL1 HSD17B11 chr4 88303407 - SPARCL1 chr4 88420737 - Exonic hg19 LIHC TCGA-DD-AAE9-01A 17 12 CDS-5'UTR Intra-chr q22.1 q22.1 Tumor suppressor gene Seq+ 64452 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSD17B11-UGT2A3 HSD17B11 chr4 88312013 - UGT2A3 chr4 69798477 - Exonic hg19 LIHC TCGA-BD-A2L6-01A 99 71 In-Frame Intra-chr q22.1 Seq+ 64453 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSD17B12-TP53I11 HSD17B12 chr11 43837941 - TP53I11 chr11 44960741 - Exonic hg19 HNSC TCGA-CR-6478-01A 8 3 CDS-5'UTR Intra-chr p11.2 p11.2 Seq+ 64454 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSD17B12-WT1 HSD17B12 chr11 43702537 - WT1 chr11 32450165 - Exonic hg19 KICH TCGA-KL-8335-01A 5 8 In-Frame Intra-chr p11.2 p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 64455 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSD17B14-PLEKHA4 HSD17B14 chr19 49335923 - PLEKHA4 chr19 49344567 - Exonic hg19 ACC TCGA-OR-A5J7-01A 139 55 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 64456 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSD17B3-ENPP2 HSD17B3 chr9 99060698 - ENPP2 chr8 120638960 - Exonic hg19 BRCA TCGA-B6-A0X1-01A 2 2 Out-of-frame Inter-chr q22.32 q24.12 Seq+ 64457 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSD17B4-TNFAIP8 HSD17B4 chr5 118850741 - TNFAIP8 chr5 118728511 + Exonic hg19 STAD TCGA-CD-A4MH-01A 4 18 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 64458 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSD17B4-TNFAIP8 HSD17B4 chr5 118792063 - TNFAIP8 chr5 118728511 + Exonic hg19 CESC TCGA-JW-A5VL-01A 61 28 In-Frame Intra-chr q23.1 q23.1 Seq+ 64459 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSDL2-FRMD3 HSDL2 chr9 115142460 - FRMD3 chr9 86004623 - Exonic hg19 BRCA TCGA-A2-A0EW-01A 5 6 Out-of-frame Intra-chr q32 q21.32 Seq+ 64460 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSDL2-TEX10 HSDL2 chr9 115142460 - TEX10 chr9 103111654 - Exonic hg19 MESO TCGA-TS-A8AY-01A 14 9 5'UTR-5'UTR Intra-chr q32 q31.1 Seq+ 64461 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSF1-ADAMTS12 HSF1 chr8 145515556 - ADAMTS12 chr5 33596165 - Exonic hg19 BRCA TCGA-BH-A0B3-01A 27 22 Out-of-frame Inter-chr q24.3 Transcription factor p13.2 Seq+ 64462 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSF1-MICALL1 HSF1 chr8 145515556 - MICALL1 chr22 38307959 + Exonic hg19 PRAD TCGA-XK-AAIV-01A 6 17 Out-of-frame Inter-chr q24.3 Transcription factor q13.1 Seq+ 64463 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSP90AA1-RAGE HSP90AA1 chr14 102605587 - RAGE chr14 102718332 - Exonic hg19 LUSC TCGA-66-2758-01A 12 2 Out-of-frame Intra-chr q32.31 Oncogene 64464 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSP90AB1-SLC29A1 HSP90AB1 chr6 44214932 - SLC29A1 chr6 44195000 + Exonic hg19 BRCA TCGA-BH-A0WA-01A 216 176 5'UTR-5'UTR Intra-chr p21.1 Oncogene p21.1 Seq+ 64465 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSP90AB1-TAF3 HSP90AB1 chr6 44221599 - TAF3 chr10 8017036 + Exonic hg19 BRCA TCGA-AR-A0TV-01A 2 1 Out-of-frame Inter-chr p21.1 Oncogene p14 64466 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSP90B1-CFB HSP90B1 chr12 104341704 - CFB chr6 31913427 + Exonic hg19 BRCA TCGA-BH-A0B6-01A 2 1 3'UTR-5'UTR Inter-chr q23.3 Tumor suppressor gene 64467 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSP90B1-SUPT16H HSP90B1 chr12 104341704 - SUPT16H chr14 21829491 - Exonic hg19 LUAD TCGA-78-7148-01A 2 31 3'UTR-CDS Inter-chr q23.3 Tumor suppressor gene q11.2 64468 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSP90B1-UTRN HSP90B1 chr12 104341704 - UTRN chr6 144665237 + Exonic hg19 HNSC TCGA-BB-7871-01A 2 10 3'UTR-CDS Inter-chr q23.3 Tumor suppressor gene q24.2 64469 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPA12A-KIAA1598 HSPA12A chr10 118501941 - KIAA1598 chr10 118646077 - Exonic hg19 LUAD TCGA-05-4430-01A 3 4 Out-of-frame Intra-chr q25.3 Seq+ 64470 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPA12B-BRE HSPA12B chr20 3731554 - BRE chr2 28550141 + Exonic hg19 UCS TCGA-N5-A4RA-01A 2 2 Out-of-frame Inter-chr p13 64471 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPA14-C10orf115 HSPA14 chr10 14891810 - C10orf115 chr10 23493184 - Exonic hg19 CESC TCGA-VS-A8QF-01A 12 4 Out-of-frame Intra-chr p13 64472 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPA14-MRPS35 HSPA14 chr10 14882156 - MRPS35 chr12 27888380 + Exonic hg19 BRCA TCGA-A7-A2KD-01A 14 12 Out-of-frame Inter-chr p13 p11.22 Seq+ 64473 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPA1B-MYLK HSPA1B chr6 31798031 - MYLK chr3 123519035 - Exonic hg19 PRAD TCGA-G9-6371-01A 2 1 Out-of-frame Inter-chr q21.1 64474 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPA1B-SLC1A3 HSPA1B chr6 31798031 - SLC1A3 chr5 36606541 + Exonic hg19 LGG TCGA-FG-8191-01A 2 2 Out-of-frame Inter-chr p13.2 64475 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPA9-ARL15 HSPA9 chr5 137903144 - ARL15 chr5 53182543 - Exonic hg19 BRCA TCGA-D8-A1JL-01A 35 16 Out-of-frame Intra-chr q31.2 q11.2 Seq+ 64476 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPB1-AC011333.1 HSPB1 chr7 75933612 - AC011333.1 chr5 173473096 + Exonic hg19 BRCA TCGA-AC-A5XU-01A 2 31 Out-of-frame Inter-chr q11.23 q35.2 64477 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPB1-CAMKK2 HSPB1 chr7 75933612 - CAMKK2 chr12 121682418 - Exonic hg19 PRAD TCGA-XA-A8JR-01A 2 3 3'UTR-CDS Inter-chr q11.23 q24.31 64478 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPB1-CLDN7 HSPB1 chr7 75933609 - CLDN7 chr17 7166264 - Exonic hg19 CESC TCGA-DS-A1OB-01A 2 1 3'UTR-5'UTR Inter-chr q11.23 p13.1 64479 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPB1-DDX27 HSPB1 chr7 75933612 - DDX27 chr20 47849303 + Exonic hg19 CESC TCGA-EK-A2RC-01A 2 32 Out-of-frame Inter-chr q11.23 q13.13 64480 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPB1-MYO1B HSPB1 chr7 75933609 - MYO1B chr2 192275792 + Exonic hg19 HNSC TCGA-CV-6960-01A 2 8 3'UTR-CDS Inter-chr q11.23 q32.3 64481 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPB1-PLAT HSPB1 chr7 75933612 - PLAT chr8 42051245 - Exonic hg19 CESC TCGA-EK-A2PM-01A 2 4 Out-of-frame Inter-chr q11.23 p11.21 64482 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPB1-SF3B2 HSPB1 chr7 75933612 - SF3B2 chr11 65836145 + Exonic hg19 LUSC TCGA-98-A53I-01A 2 21 3'UTR-CDS Inter-chr q11.23 q13.1 64483 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPB1-STAT6 HSPB1 chr7 75933612 - STAT6 chr12 57496773 - Exonic hg19 CESC TCGA-VS-A958-01A 2 1 Out-of-frame Inter-chr q11.23 q13.3 Transcription factor 64484 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPB1-THSD4 HSPB1 chr7 75933612 - THSD4 chr15 72072881 + Exonic hg19 HNSC TCGA-HD-7753-01A 2 3 Out-of-frame Inter-chr q11.23 q23 64485 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPB1-TTN HSPB1 chr7 75933609 - TTN chr2 179537430 - Exonic hg19 HNSC TCGA-HD-8224-01A 2 1 3'UTR-CDS Inter-chr q11.23 q31.2 CAMK:MLCK 64486 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPB1-TYK2 HSPB1 chr7 75933612 - TYK2 chr19 10491352 - Exonic hg19 KICH TCGA-KM-8442-01A 2 5 Out-of-frame Inter-chr q11.23 p13.2 TK:JakA 64487 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPB11-SSBP3 HSPB11 chr1 54395712 - SSBP3 chr1 54708972 - Exonic hg19 STAD TCGA-BR-4366-01A 8 31 Out-of-frame Intra-chr p32.3 p32.3 Seq+ 64488 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPB11-ZCCHC11 HSPB11 chr1 54405658 - ZCCHC11 chr1 52962855 - Exonic hg19 HNSC TCGA-CV-5970-01A 6 3 Out-of-frame Intra-chr p32.3 p32.3 Seq+ 64489 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPB8-C9orf80 HSPB8 chr12 119617484 - C9orf80 chr9 115456513 - Exonic hg19 SARC TCGA-DX-AATS-01A 2 2 In-Frame Inter-chr q24.23 64490 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPBP1-ZNF418 HSPBP1 chr19 55789010 - ZNF418 chr19 58433997 - Exonic hg19 PAAD TCGA-2J-AABP-01A 5 7 CDS-3'UTR Intra-chr q13.42 q13.43 Transcription factor Seq+ 64491 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPG2-KIAA0247 HSPG2 chr1 22157475 - KIAA0247 chr14 70125230 + Exonic hg19 LUAD TCGA-69-8254-01A 2 2 CDS-5'UTR Inter-chr p36.12 64492 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPG2-MATN2 HSPG2 chr1 22165864 - MATN2 chr8 98991114 + Exonic hg19 UCEC TCGA-FI-A3PV-01A 65 42 In-Frame Inter-chr p36.12 q22.1 Seq+ 64493 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPG2-MYBPHL HSPG2 chr1 22222415 - MYBPHL chr1 109836871 - Exonic hg19 STAD TCGA-HU-A4HD-01A 2 32 In-Frame Intra-chr p36.12 p13.3 Seq+ 64494 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPG2-NTNG1 HSPG2 chr1 22222415 - NTNG1 chr1 107866904 + Exonic hg19 LUAD TCGA-05-4430-01A 4 2 Out-of-frame Intra-chr p36.12 p13.3 Seq+ 64495 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPG2-SIAE HSPG2 chr1 22148738 - SIAE chr11 124543777 - Exonic hg19 KIRC TCGA-A3-3372-01A 2 1 3'UTR-5'UTR Inter-chr p36.12 q24.2 64496 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPH1-DDX27 HSPH1 chr13 31710765 - DDX27 chr20 47849303 + Exonic hg19 LGG TCGA-HT-8010-01A 2 3 Out-of-frame Inter-chr q12.3 q13.13 64497 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPH1-KIAA0825 HSPH1 chr13 31714321 - KIAA0825 chr5 93820635 - Exonic hg19 BRCA TCGA-AC-A3OD-01B 8 3 Out-of-frame Inter-chr q12.3 q15 64498 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HSPH1-PLEKHA5 HSPH1 chr13 31710765 - PLEKHA5 chr12 19441012 + Exonic hg19 HNSC TCGA-CR-6474-01A 2 18 Out-of-frame Inter-chr q12.3 p12.3 64499 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HTATSF1-BRS3 HTATSF1 chrX 135586622 - BRS3 chrX 135572292 + Exonic hg19 TGCT TCGA-2G-AAGX-01A 11 8 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 64500 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HTATSF1-BRS3 HTATSF1 chrX 135586622 - BRS3 chrX 135572292 + Exonic hg19 BRCA TCGA-A2-A04W-01A 3 2 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 64501 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HTATSF1-BRS3 HTATSF1 chrX 135586622 - BRS3 chrX 135572292 + Exonic hg19 BRCA TCGA-A8-A06X-01A 23 11 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 64502 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HTATSF1-BRS3 HTATSF1 chrX 135586622 - BRS3 chrX 135572292 + Exonic hg19 COAD TCGA-CK-5915-01A 31 22 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 64503 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HTATSF1-BRS3 HTATSF1 chrX 135586622 - BRS3 chrX 135572292 + Exonic hg19 THCA TCGA-EM-A3O6-01A 62 17 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 64504 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HTATSF1-BRS3 HTATSF1 chrX 135586622 - BRS3 chrX 135572292 + Exonic hg19 LUAD TCGA-L9-A443-01A 18 3 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 64505 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HTATSF1-BRS3 HTATSF1 chrX 135586622 - BRS3 chrX 135572292 + Exonic hg19 PCPG TCGA-QR-A6GZ-01A 21 3 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 64506 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HTATSF1-BRS3 HTATSF1 chrX 135586622 - BRS3 chrX 135572292 + Exonic hg19 PCPG TCGA-QR-A6GZ-05A 10 9 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 64507 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HTATSF1-BRS3 HTATSF1 chrX 135586622 - BRS3 chrX 135572292 + Exonic hg19 THYM TCGA-ZB-A965-01A 20 8 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 64508 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HTR7-C10orf11 HTR7 chr10 92616890 - C10orf11 chr10 77795766 + Exonic hg19 UCEC TCGA-5B-A90C-01A 3 4 In-Frame Intra-chr q23.31 Seq+ 64509 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HTR7-VAC14 HTR7 chr10 92616890 - VAC14 chr16 70796928 - Exonic hg19 UCS TCGA-N9-A4PZ-01A 18 14 In-Frame Inter-chr q23.31 q22.2 Seq+ 64510 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HTRA1-C7 HTRA1 chr10 124274423 - C7 chr5 40954982 + Exonic hg19 KIRP TCGA-BQ-5889-01A 2 14 Out-of-frame Inter-chr q26.13 Tumor suppressor gene p13.1 Tumor suppressor gene 64511 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HTRA1-TYK2 HTRA1 chr10 124274423 - TYK2 chr19 10491352 - Exonic hg19 BRCA TCGA-C8-A12L-01A 2 1 Out-of-frame Inter-chr q26.13 Tumor suppressor gene p13.2 TK:JakA 64512 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HTT-ESYT2 HTT chr4 3201666 - ESYT2 chr7 158566087 - Exonic hg19 BRCA TCGA-E9-A1R6-01A 11 5 Out-of-frame Inter-chr p16.3 q36.3 Seq+ 64513 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HTT-WDR19 HTT chr4 3190820 - WDR19 chr4 39257468 + Exonic hg19 PRAD TCGA-V1-A9OL-01A 65 60 In-Frame Intra-chr p16.3 p14 Seq+ 64514 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HUNK-MAMLD1 HUNK chr21 33246248 - MAMLD1 chrX 149638017 + Exonic hg19 KIRC TCGA-CJ-5681-01A 5 6 In-Frame Inter-chr q22.11 CAMK:CAMKL q28 Seq+ 64515 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HUWE1-BICD1 HUWE1 chrX 53651556 - BICD1 chr12 32520604 + Exonic hg19 BLCA TCGA-XF-A9SM-01A 14 8 In-Frame Inter-chr p11.22 p11.21 Seq+ 64516 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HUWE1-CLCN5 HUWE1 chrX 53600710 - CLCN5 chrX 49806925 + Exonic hg19 OV TCGA-20-0991-01A 2 6 Out-of-frame Intra-chr p11.22 p11.23 Seq+ 64517 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HUWE1-GUF1 HUWE1 chrX 53707002 - GUF1 chr4 44682711 + Exonic hg19 HNSC TCGA-CN-6024-01A 9 1 5'UTR-CDS Inter-chr p11.22 p12 64518 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HUWE1-PHF8 HUWE1 chrX 53635813 - PHF8 chrX 54049276 - Exonic hg19 UCEC TCGA-AJ-A6NU-01A 3 2 Out-of-frame Intra-chr p11.22 p11.22 Seq+ 64519 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HUWE1-PHF8 HUWE1 chrX 53634484 - PHF8 chrX 53970676 - Exonic hg19 BRCA TCGA-BH-A18T-01A 44 42 Out-of-frame Intra-chr p11.22 p11.22 Seq+ 64520 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HVCN1-GOLGA3 HVCN1 chr12 111127531 - GOLGA3 chr12 133385135 - Exonic hg19 SARC TCGA-DX-A3LS-01A 2 2 5'UTR-CDS Intra-chr q24.11 q24.33 Seq+ 64521 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq HYI-NFIA HYI chr1 43917319 - NFIA chr1 61798184 + Exonic hg19 BRCA TCGA-OL-A5RZ-01A 9 20 In-Frame Intra-chr p34.2 p31.3 Transcription factor Seq+ 64522 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ICA1-HGF ICA1 chr7 8301724 - HGF chr7 81374436 - Exonic hg19 BLCA TCGA-C4-A0F7-01A 5 6 5'UTR-CDS Intra-chr p21.3 q21.11 Oncogene Seq+ 64523 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ICAM1-HNRNPM ICAM1 chr19 10385704 - HNRNPM chr19 8550487 + Exonic hg19 LUSC TCGA-77-7338-01A 68 79 In-Frame Intra-chr p13.2 p13.2 Seq+ 64524 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ICAM3-TYK2 ICAM3 chr19 10445204 - TYK2 chr19 10468814 - Exonic hg19 PAAD TCGA-LB-A7SX-01A 3 7 Out-of-frame Intra-chr p13.2 p13.2 TK:JakA Seq+ 64525 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ICK-FAM83B ICK chr6 52883128 - FAM83B chr6 54734985 + Exonic hg19 UCEC TCGA-A5-A7WK-01A 9 4 CDS-5'UTR Intra-chr p12.1 CMGC:RCK Oncogene p12.1 Seq+ 64526 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ICMT-ACOT7 ICMT chr1 6291962 - ACOT7 chr1 6324755 - Exonic hg19 TGCT TCGA-2G-AAG8-01A 47 22 In-Frame Intra-chr p36.31 p36.31 Seq+ 64527 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ICMT-GPR153 ICMT chr1 6293534 - GPR153 chr1 6315074 - Exonic hg19 BRCA TCGA-BH-A0DX-01A 10 6 CDS-5'UTR Intra-chr p36.31 p36.31 Seq+ 64528 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ICOSLG-KCNJ6 ICOSLG chr21 45649937 - KCNJ6 chr21 39087434 - Exonic hg19 BRCA TCGA-A7-A13D-01A 2 4 In-Frame Intra-chr q22.3 q22.13 64529 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IDE-CAMK1D IDE chr10 94243012 - CAMK1D chr10 12802947 + Exonic hg19 PRAD TCGA-EJ-7314-01A 12 7 In-Frame Intra-chr q23.33 p13 Seq+ 64530 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IDH3A-DHX32 IDH3A chr15 78452548 - DHX32 chr10 127526956 - Exonic hg19 SARC TCGA-DX-A8BT-01A 2 5 Out-of-frame Inter-chr q25.1 q26.2 Seq+ 64531 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IDS-PHACTR1 IDS chrX 148577877 - PHACTR1 chr6 13160436 + Exonic hg19 LGG TCGA-TQ-A8XE-02A 3 3 Out-of-frame Inter-chr q28 Seq+ 64532 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IDUA-ALS2CR12 IDUA chr4 981737 - ALS2CR12 chr2 202154508 - Exonic hg19 LIHC TCGA-DD-AAD5-01A 24 16 Out-of-frame Inter-chr p16.3 q33.1 Seq+ 64533 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFFO2-UBR4 IFFO2 chr1 19282162 - UBR4 chr1 19411192 - Exonic hg19 BRCA TCGA-B6-A0I1-01A 2 6 In-Frame Intra-chr p36.13 p36.13 Seq+ 64534 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFFO2-UBR4 IFFO2 chr1 19282162 - UBR4 chr1 19500941 - Exonic hg19 BLCA TCGA-GV-A3QF-01A 6 2 Out-of-frame Intra-chr p36.13 p36.13 Seq+ 64535 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFI27-NDUFV1 IFI27 chr14 94583027 - NDUFV1 chr11 67375697 + Exonic hg19 ACC TCGA-OR-A5JE-01A 2 95 Out-of-frame Inter-chr q32.12 q13.2 64536 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFI44L-SLC44A3 IFI44L chr1 79086256 - SLC44A3 chr1 95322891 + Exonic hg19 BRCA TCGA-A7-A2KD-01A 11 4 5'UTR-CDS Intra-chr p31.1 p21.3 Seq+ 64537 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFI6-C1orf201 IFI6 chr1 27994737 - C1orf201 chr1 24718169 - Exonic hg19 LUAD TCGA-55-8507-01A 51 35 In-Frame Intra-chr p35.3 64538 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFIT5-HK1 IFIT5 chr10 91174560 - HK1 chr10 71103583 + Exonic hg19 COAD TCGA-CA-5254-01A 7 16 Out-of-frame Intra-chr q23.31 q22.1 Seq+ 64539 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFITM10-DENND5A IFITM10 chr11 1768897 - DENND5A chr11 9215228 - Exonic hg19 BRCA TCGA-A8-A06O-01A 9 6 Out-of-frame Intra-chr p15.4 Seq+ 64540 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFNGR1-SMCHD1 IFNGR1 chr6 137540380 - SMCHD1 chr18 2760650 + Exonic hg19 PRAD TCGA-VP-A875-01A 7 3 Out-of-frame Inter-chr q23.3 p11.32 Tumor suppressor gene Seq+ 64541 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFNGR2-NUDCD3 IFNGR2 chr21 34805178 - NUDCD3 chr7 44444182 - Exonic hg19 PAAD TCGA-L1-A7W4-01A 142 146 In-Frame Inter-chr p13 Seq+ 64542 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFT122-C3orf37 IFT122 chr3 129207240 - C3orf37 chr3 129017197 + Exonic hg19 LUAD TCGA-49-4514-01A 2 1 In-Frame Intra-chr q21.3 64543 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFT122-PITPNB IFT122 chr3 129183624 - PITPNB chr22 28250927 - Exonic hg19 PRAD TCGA-G9-A9S4-01A 4 4 Out-of-frame Inter-chr q21.3 q12.1 Seq+ 64544 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFT140-ABCA3 IFT140 chr16 1657121 - ABCA3 chr16 2369841 - Exonic hg19 UCS TCGA-N6-A4VE-01A 5 2 CDS-3'UTR Intra-chr p13.3 p13.3 Seq+ 64545 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFT20-AC002094.1 IFT20 chr17 26662366 - AC002094.1 chr17 26697291 - Exonic hg19 HNSC TCGA-D6-6517-01A 84 23 Out-of-frame Intra-chr q11.2 q11.2 64546 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFT43-RBM25 IFT43 chr14 76455320 - RBM25 chr14 73543027 + Exonic hg19 PRAD TCGA-YJ-A8SW-01A 5 5 Out-of-frame Intra-chr q24.3 q24.2 Seq+ 64547 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFT43-TTLL5 IFT43 chr14 76455320 - TTLL5 chr14 76420767 + Exonic hg19 OV TCGA-23-2084-01A 2 13 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 64548 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFT43-TTLL5 IFT43 chr14 76488737 - TTLL5 chr14 76420767 + Exonic hg19 LIHC TCGA-2Y-A9GU-01A 14 7 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 64549 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFT52-HCK IFT52 chr20 42249565 - HCK chr20 30671697 + Exonic hg19 STAD TCGA-CG-4304-01A 4 1 Out-of-frame Intra-chr q13.12 q11.21 TK:Src 64550 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFT52-MXRA8 IFT52 chr20 42225162 - MXRA8 chr1 1292084 - Exonic hg19 BLCA TCGA-ZF-A9RL-01A 7 6 Out-of-frame Inter-chr q13.12 p36.33 Seq+ 64551 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFT74-C12orf51 IFT74 chr9 26962085 - C12orf51 chr12 112621070 - Exonic hg19 MESO TCGA-LK-A4O5-01A 4 10 In-Frame Inter-chr p21.2 64552 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFT74-CACNA2D3 IFT74 chr9 26990193 - CACNA2D3 chr3 55038790 + Exonic hg19 THCA TCGA-E8-A432-01A 11 3 In-Frame Inter-chr p21.2 p21.1 Tumor suppressor gene Seq+ 64553 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFT74-LDLRAD3 IFT74 chr9 26962085 - LDLRAD3 chr11 36248635 + Exonic hg19 BRCA TCGA-B6-A0RT-01A 4 1 Out-of-frame Inter-chr p21.2 p13 Seq+ 64554 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFT74-WNK2 IFT74 chr9 26962085 - WNK2 chr9 96079802 + Exonic hg19 LUSC TCGA-66-2759-01A 3 4 In-Frame Intra-chr p21.2 q22.31 Tumor suppressor gene Seq+ 64555 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFT80-ILDR1 IFT80 chr3 160018671 - ILDR1 chr3 121726008 - Exonic hg19 STAD TCGA-CD-8529-01A 3 5 In-Frame Intra-chr q25.33 q13.33 64556 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFT80-RARRES1 IFT80 chr3 160093600 - RARRES1 chr3 158422716 - Exonic hg19 LGG TCGA-TQ-A7RK-01A 13 25 In-Frame Intra-chr q25.33 q25.32 Seq+ 64557 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFT80-RARRES1 IFT80 chr3 160093600 - RARRES1 chr3 158422716 - Exonic hg19 LGG TCGA-TQ-A7RK-02A 12 17 In-Frame Intra-chr q25.33 q25.32 Seq+ 64558 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFT81-ACACB IFT81 chr12 110647021 - ACACB chr12 109625804 + Exonic hg19 PRAD TCGA-KK-A8ID-01A 3 4 3'UTR-3'UTR Intra-chr q24.11 q24.11 Seq+ 64559 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFT81-GLIPR1L2 IFT81 chr12 110618376 - GLIPR1L2 chr12 75804214 + Exonic hg19 SKCM TCGA-D3-A3BZ-06A 10 6 In-Frame Intra-chr q24.11 q21.2 Seq+ 64560 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFT81-INSR IFT81 chr12 110574665 - INSR chr19 7184648 - Exonic hg19 SARC TCGA-3B-A9HS-01A 72 51 In-Frame Inter-chr q24.11 p13.2 TK:InsR Seq+ 64561 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFT81-TSPAN8 IFT81 chr12 110656580 - TSPAN8 chr12 71835367 - Exonic hg19 SARC TCGA-DX-A3U5-01A 5 1 Out-of-frame Intra-chr q24.11 q21.1 Seq+ 64562 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IFT88-WASF3 IFT88 chr13 21157158 - WASF3 chr13 27216398 + Exonic hg19 BRCA TCGA-AR-A250-01A 2 2 CDS-5'UTR Intra-chr q12.11 Tumor suppressor gene q12.13 Seq+ 64563 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGDCC3-GLDN IGDCC3 chr15 65667435 - GLDN chr15 51675982 + Exonic hg19 LGG TCGA-DB-5277-01A 49 44 In-Frame Intra-chr q22.31 q21.2 Seq+ 64564 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF1R-ADPGK IGF1R chr15 99251336 - ADPGK chr15 73064186 - Exonic hg19 BRCA TCGA-GM-A2DK-01A 9 7 Out-of-frame Intra-chr q26.3 TK:InsR Oncogene q24.1 Seq+ 64565 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF1R-ARID1B IGF1R chr15 99251336 - ARID1B chr6 157469758 + Exonic hg19 BRCA TCGA-E9-A1NF-01A 10 5 In-Frame Inter-chr q26.3 TK:InsR Oncogene q25.3 Oncogene Seq+ 64566 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF1R-C15orf41 IGF1R chr15 99251336 - C15orf41 chr15 36936479 + Exonic hg19 BRCA TCGA-C8-A1HI-01A 4 5 Out-of-frame Intra-chr q26.3 TK:InsR Oncogene q14 Seq+ 64567 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF1R-MAP7 IGF1R chr15 99251336 - MAP7 chr6 136742937 - Exonic hg19 SARC TCGA-3B-A9HL-01A 5 5 In-Frame Inter-chr q26.3 TK:InsR Oncogene q23.3 Seq+ 64568 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF1R-PRPS1 IGF1R chr15 99486281 - PRPS1 chrX 106882525 + Exonic hg19 BRCA TCGA-A8-A09E-01A 4 3 In-Frame Inter-chr q26.3 TK:InsR Oncogene q22.3 Seq+ 64569 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF1R-RAB27A IGF1R chr15 99251336 - RAB27A chr15 55562482 - Exonic hg19 BRCA TCGA-BH-A1FG-01A 2 1 CDS-5'UTR Intra-chr q26.3 TK:InsR Oncogene q21.3 64570 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF1R-TRIP4 IGF1R chr15 99486281 - TRIP4 chr15 64737205 + Exonic hg19 BRCA TCGA-C8-A1HI-01A 17 2 Out-of-frame Intra-chr q26.3 TK:InsR Oncogene q22.31 Seq+ 64571 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF1R-WDR93 IGF1R chr15 99251336 - WDR93 chr15 90244938 + Exonic hg19 BRCA TCGA-A1-A0SF-01A 7 4 CDS-5'UTR Intra-chr q26.3 TK:InsR Oncogene q26.1 Seq+ 64572 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF2-CCT5 IGF2 chr11 2150351 - CCT5 chr5 10250033 + Exonic hg19 COAD TCGA-G4-6314-01A 3 23 Out-of-frame Inter-chr p15.5 Oncogene p15.2 64573 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF2-CCT5 IGF2 chr11 2150351 - CCT5 chr5 10250033 + Exonic hg19 UCS TCGA-N6-A4VG-01A 3 15 Out-of-frame Inter-chr p15.5 Oncogene p15.2 64574 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF2-DDX27 IGF2 chr11 2150348 - DDX27 chr20 47849303 + Exonic hg19 UCS TCGA-N5-A4R8-01A 2 2 Out-of-frame Inter-chr p15.5 Oncogene q13.13 64575 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF2-DDX27 IGF2 chr11 2150351 - DDX27 chr20 47849303 + Exonic hg19 UCS TCGA-N8-A4PN-01A 2 197 Out-of-frame Inter-chr p15.5 Oncogene q13.13 64576 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF2-EIF2AK2 IGF2 chr11 2150351 - EIF2AK2 chr2 37342384 - Exonic hg19 READ TCGA-AF-2687-01A 2 67 Out-of-frame Inter-chr p15.5 Oncogene p22.2 64577 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF2-MCM8 IGF2 chr11 2150351 - MCM8 chr20 5975386 + Exonic hg19 LUAD TCGA-50-5946-01A 2 219 Out-of-frame Inter-chr p15.5 Oncogene p12.3 64578 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF2-MTHFD1 IGF2 chr11 2150351 - MTHFD1 chr14 64891522 + Exonic hg19 UCS TCGA-NG-A4VU-01A 2 1 3'UTR-CDS Inter-chr p15.5 Oncogene q23.3 64579 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF2-SNW1 IGF2 chr11 2150348 - SNW1 chr14 78189203 - Exonic hg19 THCA TCGA-BJ-A291-01A 2 57 Out-of-frame Inter-chr p15.5 Oncogene q24.3 64580 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF2-YY1 IGF2 chr11 2150351 - YY1 chr14 100728641 + Exonic hg19 UCS TCGA-N5-A4RO-01A 2 42 3'UTR-CDS Inter-chr p15.5 Oncogene q32.2 Transcription factor 64581 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF2AS-QRSL1 IGF2AS chr11 2162177 - QRSL1 chr6 107110855 + Exonic hg19 STAD TCGA-VQ-A8DU-01A 6 39 Out-of-frame Inter-chr q21 64582 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF2BP1-BAIAP2 IGF2BP1 chr17 47109335 - BAIAP2 chr17 79073728 + Exonic hg19 READ TCGA-CI-6619-01B 2 4 Out-of-frame Intra-chr q21.32 q25.3 Seq+ 64583 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF2BP2-IFITM2 IGF2BP2 chr3 185540941 - IFITM2 chr11 308231 + Exonic hg19 UCS TCGA-ND-A4WF-01A 61 62 Out-of-frame Inter-chr q27.2 p15.5 Seq+ 64584 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF2BP2-NCEH1 IGF2BP2 chr3 185540941 - NCEH1 chr3 172365904 - Exonic hg19 BRCA TCGA-EW-A1PB-01A 2 6 Out-of-frame Intra-chr q27.2 q26.31 Seq+ 64585 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF2BP3-ACSM1 IGF2BP3 chr7 23390924 - ACSM1 chr16 20682993 - Exonic hg19 BRCA TCGA-AO-A124-01A 3 6 In-Frame Inter-chr p15.3 p12.3 Seq+ 64586 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF2BP3-PRKCA IGF2BP3 chr7 23381683 - PRKCA chr17 64637473 + Exonic hg19 LUSC TCGA-33-4587-01A 2 6 In-Frame Inter-chr p15.3 q24.2 Seq+ 64587 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF2R-ACVR2A IGF2R chr6 160390427 - ACVR2A chr2 148672760 + Exonic hg19 BRCA TCGA-BH-A0BL-01A 3 16 Out-of-frame Inter-chr q25.3 Oncogene Tumor suppressor gene q22.3 Oncogene Seq+ 64588 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF2R-ARFGEF2 IGF2R chr6 160527583 - ARFGEF2 chr20 47615777 + Exonic hg19 THCA TCGA-DJ-A3UM-01A 2 2 Out-of-frame Inter-chr q25.3 Oncogene Tumor suppressor gene q13.13 64589 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF2R-PREP IGF2R chr6 160461756 - PREP chr6 105845802 - Exonic hg19 BRCA TCGA-E9-A248-01A 9 3 Out-of-frame Intra-chr q25.3 Oncogene Tumor suppressor gene q21 64590 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF2R-QKI IGF2R chr6 160511135 - QKI chr6 163956014 + Exonic hg19 SKCM TCGA-EE-A29G-06A 9 1 Out-of-frame Intra-chr q25.3 Oncogene Tumor suppressor gene q26 Seq+ 64591 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF2R-SYTL3 IGF2R chr6 160390427 - SYTL3 chr6 159129354 + Exonic hg19 LUSC TCGA-66-2800-01A 3 6 In-Frame Intra-chr q25.3 Oncogene Tumor suppressor gene q25.3 Seq+ 64592 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGF2R-WTAP IGF2R chr6 160495007 - WTAP chr6 160163120 + Exonic hg19 LUAD TCGA-NJ-A4YF-01A 8 2 Out-of-frame Intra-chr q25.3 Oncogene Tumor suppressor gene q25.3 Seq+ 64593 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGFBP2-CLCN3 IGFBP2 chr2 217529159 - CLCN3 chr4 170623929 + Exonic hg19 UCS TCGA-N6-A4V9-01A 2 1 3'UTR-CDS Inter-chr q35 q33 64594 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGFBP3-CLCN3 IGFBP3 chr7 45951958 - CLCN3 chr4 170623929 + Exonic hg19 KIRC TCGA-CJ-6032-01A 2 14 Out-of-frame Inter-chr p12.3 Tumor suppressor gene q33 64595 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGFBP4-UTRN IGFBP4 chr17 38613983 - UTRN chr6 144665237 + Exonic hg19 LUSC TCGA-46-3767-01A 2 1 3'UTR-CDS Inter-chr q21.2 Tumor suppressor gene q24.2 64596 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGFBP5-ARHGEF4 IGFBP5 chr2 217536828 - ARHGEF4 chr2 131674224 + Exonic hg19 THCA TCGA-FK-A3SH-01A 2 1 3'UTR-5'UTR Intra-chr q35 Tumor suppressor gene q21.1 64597 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGFBP5-CXCR5 IGFBP5 chr2 217536828 - CXCR5 chr11 118754475 + Exonic hg19 BRCA TCGA-A8-A079-01A 2 1 3'UTR-5'UTR Inter-chr q35 Tumor suppressor gene q23.3 64598 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGFBP5-SIAE IGFBP5 chr2 217536828 - SIAE chr11 124543777 - Exonic hg19 THCA TCGA-EL-A3MW-01A 2 14 3'UTR-5'UTR Inter-chr q35 Tumor suppressor gene q24.2 64599 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGFBP5-TYK2 IGFBP5 chr2 217536828 - TYK2 chr19 10491352 - Exonic hg19 KIRC TCGA-A3-3317-01A 2 5 3'UTR-5'UTR Inter-chr q35 Tumor suppressor gene p13.2 TK:JakA 64600 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGFBPL1-KIAA1539 IGFBPL1 chr9 38413234 - KIAA1539 chr9 35108734 - Exonic hg19 SARC TCGA-HB-A2OT-01A 3 3 Out-of-frame Intra-chr p13.1 Tumor suppressor gene 64601 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGFN1-KANK1 IGFN1 chr1 201191955 - KANK1 chr9 734748 + Exonic hg19 LGG TCGA-DU-8163-01A 31 17 Out-of-frame Inter-chr q32.1 p24.3 Tumor suppressor gene Seq+ 64602 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGHMBP2-C11orf20 IGHMBP2 chr11 68679071 - C11orf20 chr11 64068129 + Exonic hg19 UCEC TCGA-SL-A6J9-01A 2 1 In-Frame Intra-chr q13.3 64603 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGHMBP2-C7orf72 IGHMBP2 chr11 68685351 - C7orf72 chr7 50179736 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 2 1 Out-of-frame Inter-chr q13.3 p12.2 64604 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGHMBP2-GPR137 IGHMBP2 chr11 68679071 - GPR137 chr11 64055812 + Exonic hg19 UCEC TCGA-SL-A6J9-01A 16 13 In-Frame Intra-chr q13.3 q13.1 Seq+ 64605 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGSF11-UPK1B IGSF11 chr3 118753378 - UPK1B chr3 118905561 + Exonic hg19 PAAD TCGA-FB-AAQ1-01A 2 2 CDS-5'UTR Intra-chr q13.32 q13.32 Seq+ 64606 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGSF3-C1orf137 IGSF3 chr1 117208906 - C1orf137 chr1 117237381 + Exonic hg19 HNSC TCGA-CV-A6JU-01A 18 20 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 64607 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGSF3-KDM2A IGSF3 chr1 117208906 - KDM2A chr11 66947550 + Exonic hg19 BRCA TCGA-BH-A0W3-01A 27 22 Out-of-frame Inter-chr p13.1 q13.2 Transcription factor Seq+ 64608 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGSF3-MAN1A2 IGSF3 chr1 117208906 - MAN1A2 chr1 117944808 + Exonic hg19 BRCA TCGA-BH-A0GY-01A 10 4 Out-of-frame Intra-chr p13.1 p12 Seq+ 64609 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGSF3-PARL IGSF3 chr1 117122014 - PARL chr3 183547497 - Exonic hg19 LUSC TCGA-85-7698-01A 18 13 Out-of-frame Inter-chr p13.1 q27.1 Seq+ 64610 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGSF3-SYCP1 IGSF3 chr1 117208906 - SYCP1 chr1 115489867 + Exonic hg19 COAD TCGA-AZ-4323-01A 6 3 Out-of-frame Intra-chr p13.1 p13.2 Seq+ 64611 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGSF3-TBX15 IGSF3 chr1 117142563 - TBX15 chr1 119456802 - Exonic hg19 BRCA TCGA-C8-A12L-01A 9 3 Out-of-frame Intra-chr p13.1 p12 Transcription factor Seq+ 64612 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGSF9-SLAMF9 IGSF9 chr1 159912753 - SLAMF9 chr1 159921656 - Exonic hg19 OV TCGA-13-1497-01A 2 2 In-Frame Intra-chr q23.2 q23.2 64613 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IGSF9B-OPCML IGSF9B chr11 133815956 - OPCML chr11 132812905 - Exonic hg19 SARC TCGA-PC-A5DP-01A 6 2 In-Frame Intra-chr q25 q25 Tumor suppressor gene 64614 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IKBIP-ANKS1B IKBIP chr12 99028074 - ANKS1B chr12 99175915 - Exonic hg19 BRCA TCGA-E2-A159-01A 5 8 In-Frame Intra-chr q23.1 q23.1 64615 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IKBKAP-CTNNAL1 IKBKAP chr9 111685122 - CTNNAL1 chr9 111761536 - Exonic hg19 LGG TCGA-TM-A84Q-01A 15 1 In-Frame Intra-chr q31.3 q31.3 Seq+ 64616 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IKBKAP-EPB41L4B IKBKAP chr9 111696144 - EPB41L4B chr9 112042201 - Exonic hg19 STAD TCGA-BR-8373-01A 5 17 5'UTR-CDS Intra-chr q31.3 q31.3 Seq+ 64617 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IKBKAP-TBC1D2 IKBKAP chr9 111696144 - TBC1D2 chr9 101014208 - Exonic hg19 BRCA TCGA-EW-A1PD-01A 3 1 5'UTR-CDS Intra-chr q31.3 q22.33 Seq+ 64618 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IKBKB-ANK1 IKBKB chr8 42129723 - ANK1 chr8 41615655 - Exonic hg19 LUSC TCGA-96-8170-01A 12 3 In-Frame Intra-chr p11.21 Oncogene p11.21 Seq+ 64619 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IKBKB-ANK1 IKBKB chr8 42129723 - ANK1 chr8 41566493 - Exonic hg19 BRCA TCGA-EW-A6SB-01A 6 2 In-Frame Intra-chr p11.21 Oncogene p11.21 Seq+ 64620 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IKBKB-ANK1 IKBKB chr8 42129723 - ANK1 chr8 41591587 - Exonic hg19 PAAD TCGA-HZ-A77P-01A 8 5 In-Frame Intra-chr p11.21 Oncogene p11.21 Seq+ 64621 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IKBKB-FADD IKBKB chr8 42166543 - FADD chr11 70052239 + Exonic hg19 BRCA TCGA-AR-A2LK-01A 39 20 Out-of-frame Inter-chr p11.21 Oncogene q13.3 Tumor suppressor gene Seq+ 64622 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IKBKB-LETM2 IKBKB chr8 42129723 - LETM2 chr8 38257790 + Exonic hg19 PAAD TCGA-HZ-A77P-01A 8 13 In-Frame Intra-chr p11.21 Oncogene p11.23 Seq+ 64623 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IKBKB-RP11-930P14.1 IKBKB chr8 42147791 - RP11-930P14.1 chr8 41521605 + Exonic hg19 BRCA TCGA-XX-A899-01A 50 17 Out-of-frame Intra-chr p11.21 Oncogene 64624 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IKBKB-UNC5D IKBKB chr8 42129723 - UNC5D chr8 35406810 + Exonic hg19 BLCA TCGA-FD-A3SR-01A 25 10 Out-of-frame Intra-chr p11.21 Oncogene p12 Tumor suppressor gene Seq+ 64625 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IKBKE-ACSM1 IKBKE chr1 206667324 - ACSM1 chr16 20651906 - Exonic hg19 KIRC TCGA-BP-4787-01A 6 3 In-Frame Inter-chr q32.1 Oncogene p12.3 Seq+ 64626 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IKBKG-GAB3 IKBKG chrX 153775960 - GAB3 chrX 153944604 - Exonic hg19 HNSC TCGA-CV-6953-01A 13 4 5'UTR-CDS Intra-chr q28 q28 Seq+ 64627 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IKZF1-LRBA IKZF1 chr7 50367353 - LRBA chr4 151207186 - Exonic hg19 BRCA TCGA-D8-A27H-01A 28 11 In-Frame Inter-chr p12.2 Oncogene Tumor suppressor gene Transcription factor q31.3 Seq+ 64628 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IKZF2-EFHA1 IKZF2 chr2 213914437 - EFHA1 chr13 22069457 - Exonic hg19 PRAD TCGA-EJ-5512-01A 4 4 In-Frame Inter-chr q34 Tumor suppressor gene Transcription factor 64629 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IKZF3-BCAS3 IKZF3 chr17 37933904 - BCAS3 chr17 58945937 + Exonic hg19 BRCA TCGA-AR-A250-01A 10 3 Out-of-frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q23.2 Seq+ 64630 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IKZF3-PNMT IKZF3 chr17 38020373 - PNMT chr17 37825882 + Exonic hg19 BRCA TCGA-3C-AALI-01A 305 461 In-Frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q12 Seq+ 64631 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IKZF3-SRCIN1 IKZF3 chr17 37985640 - SRCIN1 chr17 36735044 - Exonic hg19 BLCA TCGA-ZF-AA4T-01A 17 11 In-Frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q12 Seq+ 64632 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL11RA-WDR72 IL11RA chr9 34652230 - WDR72 chr15 53889471 - Exonic hg19 SARC TCGA-DX-A1KY-01A 33 20 5'UTR-CDS Inter-chr p13.3 q21.3 Seq+ 64633 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL12RB2-DAB1 IL12RB2 chr1 67845806 - DAB1 chr1 57611102 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 107 75 In-Frame Intra-chr p31.3 p32.1 Seq+ 64634 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL12RB2-PDE4B IL12RB2 chr1 67796493 - PDE4B chr1 66837996 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 11 14 Out-of-frame Intra-chr p31.3 p31.3 Seq+ 64635 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL12RB2-SDC3 IL12RB2 chr1 67816772 - SDC3 chr1 31350012 - Exonic hg19 SKCM TCGA-ER-A2NG-06A 15 9 In-Frame Intra-chr p31.3 p35.2 Seq+ 64636 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL13RA1-DOCK11 IL13RA1 chrX 117875119 - DOCK11 chrX 117727177 + Exonic hg19 PRAD TCGA-J9-A8CL-01A 3 2 In-Frame Intra-chr q24 q24 Seq+ 64637 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL13RA1-DOCK11 IL13RA1 chrX 117900939 - DOCK11 chrX 117796649 + Exonic hg19 LIHC TCGA-NI-A4U2-01A 34 27 In-Frame Intra-chr q24 q24 Seq+ 64638 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL13RA1-WDR44 IL13RA1 chrX 117875119 - WDR44 chrX 117521303 + Exonic hg19 LUAD TCGA-91-8499-01A 160 96 In-Frame Intra-chr q24 q24 Seq+ 64639 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL17D-IFT88 IL17D chr13 21278430 - IFT88 chr13 21199889 + Exonic hg19 SKCM TCGA-D9-A4Z5-01A 6 11 In-Frame Intra-chr q12.11 q12.11 Tumor suppressor gene Seq+ 64640 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL17RA-SCARF2 IL17RA chr22 17566119 - SCARF2 chr22 20784120 - Exonic hg19 LUSC TCGA-22-A5C4-01A 3 4 Out-of-frame Intra-chr q11.1 q11.21 Seq+ 64641 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL17RC-TTLL3 IL17RC chr3 9970314 - TTLL3 chr3 9857758 + Exonic hg19 SKCM TCGA-FR-A44A-06A 3 5 5'UTR-5'UTR Intra-chr p25.3 p25.3 Seq+ 64642 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL18R1-MCOLN2 IL18R1 chr2 102972860 - MCOLN2 chr1 85406674 - Exonic hg19 HNSC TCGA-CV-7406-01A 4 1 5'UTR-CDS Inter-chr q12.1 p22.3 64643 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL1R1-IL1R2 IL1R1 chr2 102796334 - IL1R2 chr2 102638649 + Exonic hg19 LUAD TCGA-93-A4JO-01A 2 7 3'UTR-CDS Intra-chr q11.2 q11.2 64644 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL1R1-IL1R2 IL1R1 chr2 102782741 - IL1R2 chr2 102626024 + Exonic hg19 BRCA TCGA-BH-A203-01A 5 4 In-Frame Intra-chr q11.2 q11.2 64645 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL1R1-IL1R2 IL1R1 chr2 102770477 - IL1R2 chr2 102632333 + Exonic hg19 LIHC TCGA-PD-A5DF-01A 2 2 5'UTR-CDS Intra-chr q11.2 q11.2 64646 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL1R1-MAP4K4 IL1R1 chr2 102721332 - MAP4K4 chr2 102499013 + Exonic hg19 KIRC TCGA-CZ-4857-01A 8 5 5'UTR-CDS Intra-chr q11.2 q11.2 64647 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL1RAP-COL6A5 IL1RAP chr3 190282142 - COL6A5 chr3 130092454 + Exonic hg19 LUSC TCGA-98-A53B-01A 15 9 CDS-5'UTR Intra-chr q28 q22.1 Seq+ 64648 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL1RAP-SIRPG IL1RAP chr3 190347287 - SIRPG chr20 1630054 - Exonic hg19 CHOL TCGA-W5-AA39-01A 7 4 In-Frame Inter-chr q28 p13 Seq+ 64649 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL1RAP-TMEM207 IL1RAP chr3 190326970 - TMEM207 chr3 190165616 - Exonic hg19 LUSC TCGA-22-5491-01A 6 2 In-Frame Intra-chr q28 q28 Seq+ 64650 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL1RAP-TP63 IL1RAP chr3 190232008 - TP63 chr3 189526061 + Exonic hg19 LUSC TCGA-39-5035-01A 193 52 5'UTR-CDS Intra-chr q28 q28 Tumor suppressor gene Transcription factor Seq+ 64651 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL1RAP-TPRG1 IL1RAP chr3 190232008 - TPRG1 chr3 188844846 + Exonic hg19 LUSC TCGA-90-6837-01A 4 1 Out-of-frame Intra-chr q28 q28 Seq+ 64652 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL1RAP-TPRG1 IL1RAP chr3 190347287 - TPRG1 chr3 189028175 + Exonic hg19 STAD TCGA-VQ-A92D-01A 6 79 Out-of-frame Intra-chr q28 q28 Seq+ 64653 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL1RAPL1-MAGEB10 IL1RAPL1 chrX 28807542 - MAGEB10 chrX 27835671 + Exonic hg19 BRCA TCGA-GM-A2DK-01A 2 6 CDS-5'UTR Intra-chr p21.3 p21.3 Seq+ 64654 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL1RAPL2-STK39 IL1RAPL2 chrX 104478688 - STK39 chr2 168821236 - Exonic hg19 PRAD TCGA-EJ-7782-01A 8 7 Out-of-frame Inter-chr q22.3 q24.3 Seq+ 64655 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL1RL2-IL1R2 IL1RL2 chr2 102828634 - IL1R2 chr2 102636100 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 4 1 Out-of-frame Intra-chr q12.1 q11.2 64656 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL20RA-CPM IL20RA chr6 137365229 - CPM chr12 69279669 - Exonic hg19 SARC TCGA-HB-A3YV-01A 3 1 Out-of-frame Inter-chr q23.3 q15 64657 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL20RB-NCK1 IL20RB chr3 136714398 - NCK1 chr3 136646826 + Exonic hg19 HNSC TCGA-CX-7086-01A 12 16 CDS-5'UTR Intra-chr q22.3 q22.3 Seq+ 64658 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL20RB-NR4A1 IL20RB chr3 136677043 - NR4A1 chr12 52448111 + Exonic hg19 HNSC TCGA-BA-6871-01A 3 3 In-Frame Inter-chr q22.3 q13.13 Tumor suppressor gene Transcription factor 64659 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL22RA1-C1orf201 IL22RA1 chr1 24460701 - C1orf201 chr1 24718169 - Exonic hg19 BLCA TCGA-E7-A4IJ-01A 2 2 Out-of-frame Intra-chr p36.11 64660 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL27RA-RLN3 IL27RA chr19 14153601 - RLN3 chr19 14141522 + Exonic hg19 OV TCGA-24-1616-01A 2 5 Out-of-frame Intra-chr p13.12 p13.12 Seq+ 64661 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL27RA-RLN3 IL27RA chr19 14153601 - RLN3 chr19 14141522 + Exonic hg19 BRCA TCGA-AQ-A1H3-01A 2 1 Out-of-frame Intra-chr p13.12 p13.12 Seq+ 64662 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL27RA-RLN3 IL27RA chr19 14153601 - RLN3 chr19 14141522 + Exonic hg19 KIRC TCGA-BP-4968-01A 3 1 Out-of-frame Intra-chr p13.12 p13.12 Seq+ 64663 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL27RA-RLN3 IL27RA chr19 14160126 - RLN3 chr19 14141522 + Exonic hg19 STAD TCGA-CG-4466-01A 5 9 In-Frame Intra-chr p13.12 p13.12 Seq+ 64664 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL27RA-RLN3 IL27RA chr19 14153601 - RLN3 chr19 14141522 + Exonic hg19 HNSC TCGA-CR-7399-01A 10 5 Out-of-frame Intra-chr p13.12 p13.12 Seq+ 64665 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL27RA-RLN3 IL27RA chr19 14143315 - RLN3 chr19 14141522 + Exonic hg19 SKCM TCGA-DA-A3F5-06A 43 24 Out-of-frame Intra-chr p13.12 p13.12 Seq+ 64666 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL27RA-RLN3 IL27RA chr19 14160126 - RLN3 chr19 14141522 + Exonic hg19 LUSC TCGA-NC-A5HH-01A 12 4 In-Frame Intra-chr p13.12 p13.12 Seq+ 64667 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL27RA-RLN3 IL27RA chr19 14160126 - RLN3 chr19 14141522 + Exonic hg19 LGG TCGA-S9-A6WH-01A 41 42 In-Frame Intra-chr p13.12 p13.12 Seq+ 64668 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL28RA-C1orf201 IL28RA chr1 24507221 - C1orf201 chr1 24710493 - Exonic hg19 BRCA TCGA-OL-A66I-01A 6 1 Out-of-frame Intra-chr 64669 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL34-ARG2 IL34 chr16 70613952 - ARG2 chr14 68087611 + Exonic hg19 KIRC TCGA-B2-4098-01A 4 2 5'UTR-5'UTR Inter-chr q22.1 q24.1 Seq+ 64670 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL34-CNGB1 IL34 chr16 70613952 - CNGB1 chr16 58001198 - Exonic hg19 LUAD TCGA-49-4510-01A 2 2 5'UTR-5'UTR Intra-chr q22.1 q21 64671 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL34-ST3GAL2 IL34 chr16 70613952 - ST3GAL2 chr16 70433436 - Exonic hg19 LUAD TCGA-05-4402-01A 3 3 5'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 64672 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL4I1-DYRK1B IL4I1 chr19 50430951 - DYRK1B chr19 40322608 - Exonic hg19 ESCA TCGA-JY-A6FD-01A 5 5 5'UTR-5'UTR Intra-chr q13.33 CMGC:DYRK Seq+ 64673 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL4I1-KCNQ2 IL4I1 chr19 50430951 - KCNQ2 chr20 62076717 - Exonic hg19 BRCA TCGA-A2-A3XW-01A 76 119 5'UTR-CDS Inter-chr q13.33 Seq+ 64674 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL4I1-TBC1D17 IL4I1 chr19 50430951 - TBC1D17 chr19 50385298 + Exonic hg19 CESC TCGA-IR-A3LH-01A 81 16 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 64675 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL4I1-VSTM2B IL4I1 chr19 50430951 - VSTM2B chr19 30054753 + Exonic hg19 BLCA TCGA-4Z-AA7M-01A 224 122 5'UTR-CDS Intra-chr q13.33 q12 Seq+ 64676 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL4R-ACMSD IL4R chr16 27341519 - ACMSD chr2 135655911 + Exonic hg19 SARC TCGA-DX-A8BN-01A 137 173 5'UTR-CDS Inter-chr p12.1 q21.3 Seq+ 64677 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL4R-NSMCE1 IL4R chr16 27325341 - NSMCE1 chr16 27246620 - Exonic hg19 SKCM TCGA-BF-A1Q0-01A 156 114 5'UTR-CDS Intra-chr p12.1 p12.1 Seq+ 64678 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL4R-NSMCE1 IL4R chr16 27357939 - NSMCE1 chr16 27268902 - Exonic hg19 BLCA TCGA-GU-A42P-01A 5 3 CDS-5'UTR Intra-chr p12.1 p12.1 Seq+ 64679 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL6ST-ANKRD55 IL6ST chr5 55272043 - ANKRD55 chr5 55412609 - Exonic hg19 LUAD TCGA-05-4427-01A 24 9 Out-of-frame Intra-chr q11.2 Oncogene q11.2 Seq+ 64680 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL6ST-DDX4 IL6ST chr5 55272043 - DDX4 chr5 55034778 + Exonic hg19 PRAD TCGA-ZG-A9L2-01A 16 15 CDS-5'UTR Intra-chr q11.2 Oncogene q11.2 Seq+ 64681 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IL6ST-LAMC2 IL6ST chr5 55247292 - LAMC2 chr1 183177016 + Exonic hg19 PRAD TCGA-YL-A9WL-01A 2 7 In-Frame Inter-chr q11.2 Oncogene q25.3 Seq+ 64682 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ILF3-AP1M2 ILF3 chr19 10782211 - AP1M2 chr19 10689639 - Exonic hg19 CESC TCGA-JW-A852-01A 4 2 In-Frame Intra-chr p13.2 p13.2 Seq+ 64683 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ILF3-ATG4D ILF3 chr19 10765163 - ATG4D chr19 10662573 + Exonic hg19 BLCA TCGA-XF-A9SI-01A 14 30 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 64684 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ILF3-C3 ILF3 chr19 10765163 - C3 chr19 6697805 - Exonic hg19 BRCA TCGA-A2-A0YJ-01A 7 25 5'UTR-CDS Intra-chr p13.2 p13.3 Seq+ 64685 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ILF3-DENND2D ILF3 chr19 10787986 - DENND2D chr1 111738678 - Exonic hg19 BRCA TCGA-XX-A89A-01A 6 5 Out-of-frame Inter-chr p13.2 p13.2 Tumor suppressor gene Seq+ 64686 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ILF3-PDE4A ILF3 chr19 10765163 - PDE4A chr19 10556894 + Exonic hg19 STAD TCGA-BR-8060-01A 3 13 5'UTR-CDS Intra-chr p13.2 p13.2 64687 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ILF3-ZNF177 ILF3 chr19 10782211 - ZNF177 chr19 9486992 + Exonic hg19 PRAD TCGA-KK-A5A1-01A 3 2 CDS-5'UTR Intra-chr p13.2 p13.2 Transcription factor 64688 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ILKAP-PER2 ILKAP chr2 239090706 - PER2 chr2 239157853 - Exonic hg19 BRCA TCGA-A7-A26G-01A 4 8 In-Frame Intra-chr q37.3 q37.3 Tumor suppressor gene Seq+ 64689 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ILVBL-SYDE1 ILVBL chr19 15226963 - SYDE1 chr19 15219867 + Exonic hg19 BRCA TCGA-B6-A0IQ-01A 6 6 In-Frame Intra-chr p13.12 p13.12 Seq+ 64690 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IMMP2L-DOCK4 IMMP2L chr7 111201907 - DOCK4 chr7 111644186 - Exonic hg19 STAD TCGA-D7-A4YU-01A 3 8 5'UTR-CDS Intra-chr q31.1 q31.1 KB Pub Seq+ 64691 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IMMP2L-DOCK4 IMMP2L chr7 111127294 - DOCK4 chr7 111452005 - Exonic hg19 ESCA TCGA-JY-A938-01A 2 5 In-Frame Intra-chr q31.1 q31.1 KB Pub Seq+ 64692 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IMMP2L-DOCK4 IMMP2L chr7 111161369 - DOCK4 chr7 111409733 - Exonic hg19 PRAD TCGA-YJ-A8SW-01A 2 2 Out-of-frame Intra-chr q31.1 q31.1 KB Pub Seq+ 64693 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IMMP2L-DYNC1I1 IMMP2L chr7 110526649 - DYNC1I1 chr7 95657487 + Exonic hg19 GBM TCGA-06-0184-01A 5 10 In-Frame Intra-chr q31.1 q21.3 Seq+ 64694 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IMMT-REEP1 IMMT chr2 86378420 - REEP1 chr2 86509365 - Exonic hg19 PAAD TCGA-HZ-8637-01A 10 2 Out-of-frame Intra-chr p11.2 p11.2 64695 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IMPA1-RSPO2 IMPA1 chr8 82598487 - RSPO2 chr8 109095035 - Exonic hg19 PRAD TCGA-TP-A8TV-01A 2 1 5'UTR-5'UTR Intra-chr q21.13 q23.1 Seq+ 64696 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IMPAD1-ZCCHC24 IMPAD1 chr8 57905758 - ZCCHC24 chr10 81154196 - Exonic hg19 BRCA TCGA-AN-A0AS-01A 7 6 In-Frame Inter-chr q12.1 q22.3 Seq+ 64697 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INADL-APITD1-CORT INADL chr1 62293255 - APITD1-CORT chr1 10493899 + Exonic hg19 CESC TCGA-C5-A8YQ-01A 28 7 Out-of-frame Intra-chr p36.22 Tumor suppressor gene 64698 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INADL-CACHD1 INADL chr1 62393501 - CACHD1 chr1 65113484 + Exonic hg19 BRCA TCGA-A8-A06R-01A 4 16 In-Frame Intra-chr p31.3 64699 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INADL-DYNC2H1 INADL chr1 62483619 - DYNC2H1 chr11 103151077 + Exonic hg19 CESC TCGA-Q1-A6DT-01A 144 121 Out-of-frame Inter-chr q22.3 Seq+ 64700 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INADL-GLIS1 INADL chr1 62483619 - GLIS1 chr1 54065951 - Exonic hg19 BRCA TCGA-E2-A15P-01A 12 3 CDS-5'UTR Intra-chr p32.3 Transcription factor Seq+ 64701 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INADL-MAP2K5 INADL chr1 62274202 - MAP2K5 chr15 68040569 + Exonic hg19 READ TCGA-DC-6683-01A 27 39 In-Frame Inter-chr q23 STE:STE7 Seq+ 64702 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INADL-NFIA INADL chr1 62241006 - NFIA chr1 61920975 + Exonic hg19 OV TCGA-09-1667-01C 4 2 In-Frame Intra-chr p31.3 Transcription factor Seq+ 64703 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INADL-NFIA INADL chr1 62232145 - NFIA chr1 61920975 + Exonic hg19 UCS TCGA-NA-A4R1-01A 52 13 In-Frame Intra-chr p31.3 Transcription factor Seq+ 64704 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INADL-PDE4B INADL chr1 62393501 - PDE4B chr1 66713143 + Exonic hg19 PRAD TCGA-HC-7077-01A 5 2 Out-of-frame Intra-chr p31.3 64705 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INADL-PRSS50 INADL chr1 62393501 - PRSS50 chr3 46761493 - Exonic hg19 LUSC TCGA-22-4601-01A 4 2 Out-of-frame Inter-chr p21.31 64706 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INADL-ST6GALNAC5 INADL chr1 62208227 - ST6GALNAC5 chr1 77528660 + Exonic hg19 BRCA TCGA-EW-A3U0-01A 33 8 5'UTR-CDS Intra-chr p31.1 Seq+ 64707 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INCENP-CCS INCENP chr11 61908983 - CCS chr11 66372810 + Exonic hg19 LUSC TCGA-77-8153-01A 40 37 In-Frame Intra-chr q12.3 q13.2 Seq+ 64708 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ING1-CARKD ING1 chr13 111366632 - CARKD chr13 111274563 + Exonic hg19 DLBC TCGA-GR-A4D4-01A 30 36 In-Frame Intra-chr q34 Tumor suppressor gene Seq+ 64709 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ING2-IDH1 ING2 chr4 184426520 - IDH1 chr2 209120313 - Exonic hg19 PRAD TCGA-EJ-5516-01A 9 8 Out-of-frame Inter-chr q35.1 Tumor suppressor gene q34 Oncogene Tumor suppressor gene Seq+ 64710 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ING4-A2ML1 ING4 chr12 6772231 - A2ML1 chr12 9027021 + Exonic hg19 SKCM TCGA-D3-A3CC-06A 25 278 Out-of-frame Intra-chr p13.31 Oncogene Tumor suppressor gene p13.31 Seq+ 64711 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INO80-EXD1 INO80 chr15 41279289 - EXD1 chr15 41488235 - Exonic hg19 UCEC TCGA-BK-A139-02A 2 3 Out-of-frame Intra-chr q15.1 q15.1 64712 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INO80-PRKCA INO80 chr15 41371899 - PRKCA chr17 64728806 + Exonic hg19 BRCA TCGA-C8-A1HI-01A 2 1 In-Frame Inter-chr q15.1 q24.2 Seq+ 64713 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INO80-THSD4 INO80 chr15 41313098 - THSD4 chr15 72020888 + Exonic hg19 OV TCGA-29-1702-01A 3 4 In-Frame Intra-chr q15.1 q23 Seq+ 64714 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INPP1-HECW2 INPP1 chr2 191225032 - HECW2 chr2 197298182 - Exonic hg19 KIRP TCGA-A4-A5Y0-01A 13 22 CDS-5'UTR Intra-chr q32.2 q32.3 Seq+ 64715 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INPP4A-EEF1E1 INPP4A chr2 99193606 - EEF1E1 chr6 8080263 - Exonic hg19 SARC TCGA-DX-A1L2-01A 17 21 Out-of-frame Inter-chr q11.2 p24.3 Tumor suppressor gene Seq+ 64716 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INPP4A-MGAT4A INPP4A chr2 99149958 - MGAT4A chr2 99242298 - Exonic hg19 BLCA TCGA-FD-A3SR-01A 55 7 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 64717 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INPP5A-AFAP1L2 INPP5A chr10 134351675 - AFAP1L2 chr10 116100490 - Exonic hg19 LGG TCGA-P5-A5EU-01A 2 2 Out-of-frame Intra-chr q26.3 q25.3 Tumor suppressor gene Seq+ 64718 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INPP5A-C10orf91 INPP5A chr10 134351675 - C10orf91 chr10 134259200 + Exonic hg19 OV TCGA-24-2023-01A 2 4 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 64719 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INPP5A-C10orf93 INPP5A chr10 134579350 - C10orf93 chr10 134622408 - Exonic hg19 BLCA TCGA-CU-A3KJ-01A 14 9 Out-of-frame Intra-chr q26.3 64720 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INPP5A-CSTA INPP5A chr10 134563349 - CSTA chr3 122056394 + Exonic hg19 KIRC TCGA-BP-4774-01A 2 1 In-Frame Inter-chr q26.3 q21.1 Seq+ 64721 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INPP5A-DLG2 INPP5A chr10 134464009 - DLG2 chr11 84245774 - Exonic hg19 BRCA TCGA-AR-A0TT-01A 8 2 In-Frame Inter-chr q26.3 q14.1 Seq+ 64722 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INPP5A-FAM149B1 INPP5A chr10 134563349 - FAM149B1 chr10 74999070 + Exonic hg19 BRCA TCGA-AO-A03P-01A 6 8 In-Frame Intra-chr q26.3 q22.2 Seq+ 64723 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INPP5A-FRMD4A INPP5A chr10 134351675 - FRMD4A chr10 14372182 - Exonic hg19 OV TCGA-04-1362-01A 4 2 CDS-5'UTR Intra-chr q26.3 p13 Seq+ 64724 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INPP5A-JAKMIP3 INPP5A chr10 134503959 - JAKMIP3 chr10 133950523 + Exonic hg19 LUAD TCGA-78-8640-01A 3 3 Out-of-frame Intra-chr q26.3 q26.3 64725 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INPP5A-KIF20B INPP5A chr10 134579350 - KIF20B chr10 91512324 + Exonic hg19 BRCA TCGA-AO-A03O-01A 2 2 Out-of-frame Intra-chr q26.3 q23.31 64726 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INPP5D-GIGYF2 INPP5D chr2 233944108 - GIGYF2 chr2 233681581 + Exonic hg19 STAD TCGA-CG-4449-01A 17 29 In-Frame Intra-chr q37.1 Seq+ 64727 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INPP5E-SEC16A INPP5E chr9 139328489 - SEC16A chr9 139352036 - Exonic hg19 LUSC TCGA-56-6546-01A 6 1 Out-of-frame Intra-chr q34.3 q34.3 64728 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INPP5F-GRK5 INPP5F chr10 121485871 - GRK5 chr10 121140327 + Exonic hg19 SKCM TCGA-FS-A1ZD-06A 31 23 In-Frame Intra-chr q26.11 q26.11 Seq+ 64729 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INPP5K-RPA1 INPP5K chr17 1417166 - RPA1 chr17 1746097 + Exonic hg19 CHOL TCGA-W5-AA31-01A 13 9 Out-of-frame Intra-chr p13.3 p13.3 Tumor suppressor gene Seq+ 64730 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INSIG1-DPP6 INSIG1 chr7 155094556 - DPP6 chr7 154263927 + Exonic hg19 BRCA TCGA-A2-A04U-01A 2 11 In-Frame Intra-chr q36.3 Seq+ 64731 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INSR-CEP89 INSR chr19 7267356 - CEP89 chr19 33370284 - Exonic hg19 SARC TCGA-DX-AB2O-01A 35 14 Out-of-frame Intra-chr p13.2 TK:InsR q13.11 Seq+ 64732 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INSR-MGAT4C INSR chr19 7293803 - MGAT4C chr12 86829042 - Exonic hg19 SARC TCGA-3B-A9HS-01A 7 6 CDS-5'UTR Inter-chr p13.2 TK:InsR 64733 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INSR-S1PR2 INSR chr19 7267356 - S1PR2 chr19 10335623 - Exonic hg19 STAD TCGA-CD-8533-01A 3 9 CDS-5'UTR Intra-chr p13.2 TK:InsR p13.2 Seq+ 64734 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INTS1-GET4 INTS1 chr7 1510482 - GET4 chr7 930565 + Exonic hg19 PRAD TCGA-EJ-5497-01A 4 2 In-Frame Intra-chr p22.3 p22.3 Seq+ 64735 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INTS12-CXXC4 INTS12 chr4 106613133 - CXXC4 chr4 105393523 - Exonic hg19 HNSC TCGA-CN-5364-01A 10 1 In-Frame Intra-chr q24 q24 Tumor suppressor gene Transcription factor Seq+ 64736 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INTS2-AXIN2 INTS2 chr17 59989301 - AXIN2 chr17 63554854 - Exonic hg19 BRCA TCGA-A1-A0SN-01A 3 3 CDS-5'UTR Intra-chr q23.2 q24.1 Tumor suppressor gene Seq+ 64737 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INTS2-GLIS3 INTS2 chr17 59988881 - GLIS3 chr9 3829492 - Exonic hg19 ACC TCGA-OR-A5JS-01A 7 3 Out-of-frame Inter-chr q23.2 p24.2 Transcription factor Seq+ 64738 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INTS2-LIMD2 INTS2 chr17 59974830 - LIMD2 chr17 61776708 - Exonic hg19 BRCA TCGA-D8-A27G-01A 2 1 CDS-5'UTR Intra-chr q23.2 q23.3 64739 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INTS3-CHTOP INTS3 chr1 153730239 - CHTOP chr1 153614719 + Exonic hg19 THCA TCGA-EM-A3FO-01A 50 93 In-Frame Intra-chr q21.3 q21.3 KB Pub Seq+ 64740 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INTS3-CHTOP INTS3 chr1 153730239 - CHTOP chr1 153614719 + Exonic hg19 SARC TCGA-WK-A8XY-01A 115 99 In-Frame Intra-chr q21.3 q21.3 KB Pub Seq+ 64741 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INTS4-ALG8 INTS4 chr11 77649697 - ALG8 chr11 77820627 - Exonic hg19 SKCM TCGA-FR-A7U8-06A 2 11 In-Frame Intra-chr q14.1 q14.1 Seq+ 64742 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INTS4-C11orf30 INTS4 chr11 77612467 - C11orf30 chr11 76253260 + Exonic hg19 BRCA TCGA-A8-A079-01A 6 15 Out-of-frame Intra-chr q14.1 Seq+ 64743 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INTS4-GAB2 INTS4 chr11 77690042 - GAB2 chr11 77991947 - Exonic hg19 BRCA TCGA-AC-A2BM-01A 12 13 In-Frame Intra-chr q14.1 q14.1 KB Seq+ 64744 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INTS4-KCTD14 INTS4 chr11 77702154 - KCTD14 chr11 77728316 - Exonic hg19 LIHC TCGA-BC-A10Z-01A 9 3 In-Frame Intra-chr q14.1 q14.1 Seq+ 64745 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INTS4-KCTD14 INTS4 chr11 77612467 - KCTD14 chr11 77728316 - Exonic hg19 BRCA TCGA-D8-A140-01A 4 1 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 64746 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INTS4-KCTD21 INTS4 chr11 77666988 - KCTD21 chr11 77885629 - Exonic hg19 UCEC TCGA-PG-A915-01A 8 5 CDS-5'UTR Intra-chr q14.1 q14.1 Seq+ 64747 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INTS4-NARS2 INTS4 chr11 77666988 - NARS2 chr11 78177059 - Exonic hg19 OV TCGA-57-1993-01A 2 1 In-Frame Intra-chr q14.1 q14.1 Seq+ 64748 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INTS4-NARS2 INTS4 chr11 77690042 - NARS2 chr11 78154804 - Exonic hg19 STAD TCGA-VQ-A928-01A 2 23 In-Frame Intra-chr q14.1 q14.1 Seq+ 64749 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INTS4-POLD3 INTS4 chr11 77690042 - POLD3 chr11 74379822 + Exonic hg19 BRCA TCGA-A8-A0A6-01A 27 22 CDS-3'UTR Intra-chr q14.1 q13.4 Seq+ 64750 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INTS4-PPFIA1 INTS4 chr11 77690042 - PPFIA1 chr11 70218321 + Exonic hg19 BRCA TCGA-A8-A086-01A 10 6 In-Frame Intra-chr q14.1 q13.3 Seq+ 64751 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INTS5-C11orf48 INTS5 chr11 62420642 - C11orf48 chr11 62430805 - Exonic hg19 LUSC TCGA-NK-A7XE-01A 60 22 Out-of-frame Intra-chr q12.3 64752 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INTS5-SYT12 INTS5 chr11 62420642 - SYT12 chr11 66789340 + Exonic hg19 BRCA TCGA-C8-A135-01A 4 6 CDS-5'UTR Intra-chr q12.3 q13.2 Seq+ 64753 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INTS7-DTL INTS7 chr1 212208686 - DTL chr1 212236226 + Exonic hg19 PRAD TCGA-CH-5752-01A 20 23 In-Frame Intra-chr q32.3 q32.3 Seq+ 64754 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INTS8-DPY19L4 INTS8 chr8 95835789 - DPY19L4 chr8 95778840 + Exonic hg19 BRCA TCGA-A8-A09A-01A 7 7 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 64755 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INTS8-ESRP1 INTS8 chr8 95841254 - ESRP1 chr8 95718153 + Exonic hg19 SKCM TCGA-EE-A181-06A 44 28 In-Frame Intra-chr q22.1 q22.1 Tumor suppressor gene Seq+ 64756 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INTS8-RP11-219B4.5 INTS8 chr8 95879565 - RP11-219B4.5 chr8 86135082 - Exonic hg19 BRCA TCGA-C8-A12L-01A 59 24 Out-of-frame Intra-chr q22.1 64757 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INTS9-AC130352.1 INTS9 chr8 28638340 - AC130352.1 chr8 12423395 + Exonic hg19 BRCA TCGA-A7-A6VX-01A 18 16 Out-of-frame Intra-chr p21.1 p23.1 64758 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq INVS-RPA3 INVS chr9 102888831 - RPA3 chr7 7680806 - Exonic hg19 UCEC TCGA-AX-A3G1-01A 2 1 CDS-5'UTR Inter-chr q31.1 p21.3 Seq+ 64759 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IP6K1-HYAL3 IP6K1 chr3 49823787 - HYAL3 chr3 50330946 - Exonic hg19 PRAD TCGA-ZG-A9L2-01A 17 7 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 64760 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IP6K1-MON1A IP6K1 chr3 49775645 - MON1A chr3 49950792 - Exonic hg19 BLCA TCGA-2F-A9KP-01A 26 25 In-Frame Intra-chr p21.31 p21.31 Seq+ 64761 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IP6K1-MON1A IP6K1 chr3 49823787 - MON1A chr3 49950792 - Exonic hg19 LIHC TCGA-DD-A1EB-01A 13 5 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 64762 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IP6K1-TRAIP IP6K1 chr3 49823787 - TRAIP chr3 49885633 - Exonic hg19 STAD TCGA-BR-8678-01A 9 28 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 64763 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IP6K1-TRAIP IP6K1 chr3 49823787 - TRAIP chr3 49877806 - Exonic hg19 HNSC TCGA-CR-6488-01A 15 4 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 64764 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IP6K1-UBA7 IP6K1 chr3 49823787 - UBA7 chr3 49847616 - Exonic hg19 ESCA TCGA-L5-A8NE-01A 5 43 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 64765 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IP6K2-PRKAR2A IP6K2 chr3 48754590 - PRKAR2A chr3 48802782 - Exonic hg19 BRCA TCGA-A1-A0SK-01A 37 224 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 64766 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IP6K2-PRKAR2A IP6K2 chr3 48754590 - PRKAR2A chr3 48793877 - Exonic hg19 UCEC TCGA-PG-A914-01A 25 29 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 64767 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IP6K2-RHOA IP6K2 chr3 48754590 - RHOA chr3 49413024 - Exonic hg19 STAD TCGA-VQ-A925-01A 3 126 5'UTR-5'UTR Intra-chr p21.31 p21.31 Oncogene Tumor suppressor gene Seq+ 64768 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IPMK-CXCL12 IPMK chr10 59986804 - CXCL12 chr10 44793345 - Exonic hg19 LUAD TCGA-38-4632-01A 11 3 CDS-3'UTR Intra-chr q21.1 q11.21 Tumor suppressor gene 64769 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IPO11-CENPJ IPO11 chr5 61708756 - CENPJ chr13 25459524 - Exonic hg19 BRCA TCGA-B6-A0I8-01A 5 8 5'UTR-CDS Inter-chr q12.1 q12.13 Seq+ 64770 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IPO11-KIF2A IPO11 chr5 61733244 - KIF2A chr5 61669514 + Exonic hg19 STAD TCGA-CG-4443-01A 25 13 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 64771 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IPO11-TNFAIP8 IPO11 chr5 61770291 - TNFAIP8 chr5 118728511 + Exonic hg19 BRCA TCGA-A8-A08L-01A 13 19 In-Frame Intra-chr q12.1 q23.1 Seq+ 64772 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IPO13-EIF2B3 IPO13 chr1 44426934 - EIF2B3 chr1 45323479 - Exonic hg19 COAD TCGA-DM-A285-01A 5 1 Out-of-frame Intra-chr p34.1 p34.1 Seq+ 64773 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IPO7-AKIP1 IPO7 chr11 9442245 - AKIP1 chr11 8934000 + Exonic hg19 LUAD TCGA-55-6969-01A 4 7 In-Frame Intra-chr p15.4 p15.4 Seq+ 64774 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IPO7-CTR9 IPO7 chr11 9406394 - CTR9 chr11 10774219 + Exonic hg19 SKCM TCGA-WE-A8K5-06A 13 8 In-Frame Intra-chr p15.4 p15.4 Seq+ 64775 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IPO7-TMEM41B IPO7 chr11 9406394 - TMEM41B chr11 9321248 - Exonic hg19 LUAD TCGA-69-7974-01A 7 7 Out-of-frame Intra-chr p15.4 p15.4 Seq+ 64776 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IPO7-TMEM41B IPO7 chr11 9406394 - TMEM41B chr11 9321248 - Exonic hg19 SKCM TCGA-DA-A95X-06A 13 4 Out-of-frame Intra-chr p15.4 p15.4 Seq+ 64777 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IPO8-CDH13 IPO8 chr12 30809618 - CDH13 chr16 83214475 + Exonic hg19 BRCA TCGA-A2-A04P-01A 33 3 Out-of-frame Inter-chr p11.21 q23.3 Tumor suppressor gene Seq+ 64778 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IPO8-KRT86 IPO8 chr12 30837235 - KRT86 chr12 52702017 + Exonic hg19 PRAD TCGA-VP-A87D-01A 78 32 In-Frame Intra-chr p11.21 q13.13 Seq+ 64779 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IPO9-S100A13 IPO9 chr1 201798500 - S100A13 chr1 153600074 - Exonic hg19 SKCM TCGA-QB-AA9O-06A 7 3 CDS-5'UTR Intra-chr q32.1 q21.3 Seq+ 64780 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IPP-SLC22A7 IPP chr1 46165742 - SLC22A7 chr6 43266358 + Exonic hg19 UCEC TCGA-AJ-A3QS-01A 5 1 Out-of-frame Inter-chr p34.1 p21.1 Seq+ 64781 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IPPK-BICD2 IPPK chr9 95418738 - BICD2 chr9 95491518 - Exonic hg19 CESC TCGA-DS-A1OC-01A 26 11 In-Frame Intra-chr q22.31 q22.31 Seq+ 64782 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IPPK-ZNF484 IPPK chr9 95432190 - ZNF484 chr9 95618600 - Exonic hg19 STAD TCGA-BR-8361-01A 2 3 In-Frame Intra-chr q22.31 q22.31 Transcription factor 64783 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQCB1-CACNG4 IQCB1 chr3 121553238 - CACNG4 chr17 65014305 + Exonic hg19 BRCA TCGA-AO-A03L-01A 127 58 5'UTR-CDS Inter-chr q13.33 q24.2 Seq+ 64784 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQCB1-ILDR1 IQCB1 chr3 121508920 - ILDR1 chr3 121707255 - Exonic hg19 BRCA TCGA-AR-A24O-01A 3 1 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 64785 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQCH-CTNND2 IQCH chr15 67553732 - CTNND2 chr5 11199773 - Exonic hg19 SARC TCGA-DX-A1L3-01A 7 15 In-Frame Inter-chr q23 p15.2 Seq+ 64786 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQCK-ABCC1 IQCK chr16 19746772 - ABCC1 chr16 16126966 + Exonic hg19 LUSC TCGA-43-5670-01A 4 2 In-Frame Intra-chr p12.3 Seq+ 64787 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQGAP1-CCDC63 IQGAP1 chr15 90931628 - CCDC63 chr12 111311646 + Exonic hg19 STAD TCGA-CG-4477-01A 2 3 Out-of-frame Inter-chr q26.1 q24.11 64788 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQGAP1-MESP2 IQGAP1 chr15 90972898 - MESP2 chr15 90321296 + Exonic hg19 BRCA TCGA-BH-A0C0-01A 8 6 In-Frame Intra-chr q26.1 q26.1 Transcription factor 64789 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQGAP1-NGRN IQGAP1 chr15 90934105 - NGRN chr15 90814420 + Exonic hg19 ESCA TCGA-JY-A6FH-01A 6 33 In-Frame Intra-chr q26.1 q26.1 Seq+ 64790 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQGAP1-RASGRF1 IQGAP1 chr15 90934105 - RASGRF1 chr15 79298776 - Exonic hg19 SARC TCGA-FX-A3TO-01A 7 4 In-Frame Intra-chr q26.1 q25.1 Seq+ 64791 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQGAP1-SEMA4B IQGAP1 chr15 90934105 - SEMA4B chr15 90744690 + Exonic hg19 UCEC TCGA-AJ-A3IA-01A 8 2 CDS-5'UTR Intra-chr q26.1 q26.1 Seq+ 64792 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQGAP1-SEMA4B IQGAP1 chr15 90934105 - SEMA4B chr15 90760671 + Exonic hg19 COAD TCGA-AY-6196-01A 4 1 Out-of-frame Intra-chr q26.1 q26.1 Seq+ 64793 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQGAP1-SEMA4B IQGAP1 chr15 90934105 - SEMA4B chr15 90760671 + Exonic hg19 STAD TCGA-BR-8373-01A 3 25 Out-of-frame Intra-chr q26.1 q26.1 Seq+ 64794 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQGAP1-SEMA4B IQGAP1 chr15 90982631 - SEMA4B chr15 90760671 + Exonic hg19 STAD TCGA-CG-4442-01A 2 3 In-Frame Intra-chr q26.1 q26.1 Seq+ 64795 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQGAP1-SEMA4B IQGAP1 chr15 90934105 - SEMA4B chr15 90760671 + Exonic hg19 PAAD TCGA-LB-A7SX-01A 8 6 Out-of-frame Intra-chr q26.1 q26.1 Seq+ 64796 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQGAP1-TTLL13 IQGAP1 chr15 90934105 - TTLL13 chr15 90805238 + Exonic hg19 BRCA TCGA-BH-A0AV-01A 2 4 Out-of-frame Intra-chr q26.1 64797 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQGAP1-ZNF710 IQGAP1 chr15 90934105 - ZNF710 chr15 90610342 + Exonic hg19 UCEC TCGA-EY-A4KR-01A 11 1 CDS-5'UTR Intra-chr q26.1 q26.1 Transcription factor Seq+ 64798 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQGAP1-ZNF774 IQGAP1 chr15 90934105 - ZNF774 chr15 90897874 + Exonic hg19 ESCA TCGA-2H-A9GQ-01A 2 2 CDS-5'UTR Intra-chr q26.1 q26.1 Transcription factor Seq+ 64799 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQGAP1-ZNF774 IQGAP1 chr15 90934105 - ZNF774 chr15 90897874 + Exonic hg19 KIRP TCGA-5P-A9K4-01A 4 4 CDS-5'UTR Intra-chr q26.1 q26.1 Transcription factor Seq+ 64800 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQGAP1-ZNF774 IQGAP1 chr15 90934105 - ZNF774 chr15 90897874 + Exonic hg19 THCA TCGA-FY-A40L-01A 29 9 CDS-5'UTR Intra-chr q26.1 q26.1 Transcription factor Seq+ 64801 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQGAP1-ZNF774 IQGAP1 chr15 90934105 - ZNF774 chr15 90897874 + Exonic hg19 ESCA TCGA-JY-A6FE-01A 2 14 CDS-5'UTR Intra-chr q26.1 q26.1 Transcription factor Seq+ 64802 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQGAP1-ZNF774 IQGAP1 chr15 90934105 - ZNF774 chr15 90897874 + Exonic hg19 UCS TCGA-N6-A4VG-01A 19 5 CDS-5'UTR Intra-chr q26.1 q26.1 Transcription factor Seq+ 64803 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQGAP2-ACOT12 IQGAP2 chr5 75866482 - ACOT12 chr5 80626759 - Exonic hg19 BRCA TCGA-AR-A24Z-01A 2 1 Out-of-frame Intra-chr q13.3 Tumor suppressor gene q14.1 Seq+ 64804 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQGAP2-ATRNL1 IQGAP2 chr5 75866482 - ATRNL1 chr10 117278773 + Exonic hg19 HNSC TCGA-CV-7243-01A 5 1 In-Frame Inter-chr q13.3 Tumor suppressor gene q25.3 64805 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQGAP3-ETV3 IQGAP3 chr1 156539168 - ETV3 chr1 157095771 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 4 4 Out-of-frame Intra-chr q22 q23.1 Transcription factor 64806 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQGAP3-SH2D2A IQGAP3 chr1 156526325 - SH2D2A chr1 156779599 - Exonic hg19 BRCA TCGA-BH-A18R-01A 3 1 In-Frame Intra-chr q22 q23.1 Seq+ 64807 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQSEC1-GSTM3 IQSEC1 chr3 13008887 - GSTM3 chr1 110282115 - Exonic hg19 LUAD TCGA-78-7161-01A 2 1 Out-of-frame Inter-chr p25.2 p13.3 Seq+ 64808 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQSEC1-WNT7A IQSEC1 chr3 12954928 - WNT7A chr3 13916670 - Exonic hg19 BLCA TCGA-GV-A3JV-01A 551 235 Out-of-frame Intra-chr p25.2 p25.1 Tumor suppressor gene Seq+ 64809 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IQUB-ASB15 IQUB chr7 123174546 - ASB15 chr7 123254555 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 6 3 5'UTR-5'UTR Intra-chr q31.32 q31.32 64810 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IRAK1-MECP2 IRAK1 chrX 153283457 - MECP2 chrX 153298008 - Exonic hg19 BLCA TCGA-GC-A3RD-01A 38 14 Out-of-frame Intra-chr q28 TKL:IRAK q28 Transcription factor Seq+ 64811 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IRAK2-BRK1 IRAK2 chr3 10255232 - BRK1 chr3 10167310 + Exonic hg19 ESCA TCGA-VR-A8Q7-01A 4 51 Out-of-frame Intra-chr p25.3 TKL:IRAK p25.3 Seq+ 64812 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IRAK2-SRGAP3 IRAK2 chr3 10206732 - SRGAP3 chr3 9166601 - Exonic hg19 HNSC TCGA-CV-7430-01A 32 11 In-Frame Intra-chr p25.3 TKL:IRAK p25.3 Tumor suppressor gene Seq+ 64813 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IRAK3-DYRK2 IRAK3 chr12 66622150 - DYRK2 chr12 68050886 + Exonic hg19 SARC TCGA-DX-A2J0-01A 3 2 Out-of-frame Intra-chr q14.3 TKL:IRAK q15 CMGC:DYRK Seq+ 64814 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IREB2-CTSH IREB2 chr15 78732223 - CTSH chr15 79231513 - Exonic hg19 PRAD TCGA-J4-AATZ-01A 23 5 In-Frame Intra-chr q25.1 q25.1 Seq+ 64815 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IREB2-DIAPH3 IREB2 chr15 78732223 - DIAPH3 chr13 60499004 - Exonic hg19 SKCM TCGA-GN-A262-06A 16 26 In-Frame Inter-chr q25.1 q21.2 Seq+ 64816 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IREB2-LEO1 IREB2 chr15 78781113 - LEO1 chr15 52258701 - Exonic hg19 PRAD TCGA-EJ-7783-01A 4 5 Out-of-frame Intra-chr q25.1 q21.2 Seq+ 64817 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IRF2-MORN1 IRF2 chr4 185395533 - MORN1 chr1 2253018 - Exonic hg19 LUSC TCGA-94-8491-01A 2 2 5'UTR-CDS Inter-chr q35.1 Transcription factor p36.32 64818 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IRF2BP2-NTRK1 IRF2BP2 chr1 234744241 - NTRK1 chr1 156844363 + Exonic hg19 THCA TCGA-DJ-A4UP-01A 241 11 In-Frame Intra-chr q42.3 q23.1 Oncogene Seq+ 64819 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IRF2BP2-SP2 IRF2BP2 chr1 234744241 - SP2 chr17 46002285 + Exonic hg19 PCPG TCGA-QR-A708-01A 21 5 In-Frame Inter-chr q42.3 q21.32 Transcription factor Seq+ 64820 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IRF6-SRGAP2 IRF6 chr1 209979292 - SRGAP2 chr1 206610315 + Exonic hg19 LUSC TCGA-94-8490-01A 10 6 5'UTR-CDS Intra-chr q32.2 Transcription factor q32.1 Tumor suppressor gene Seq+ 64821 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IRF7-RCC1 IRF7 chr11 615345 - RCC1 chr1 28843237 + Exonic hg19 ESCA TCGA-2H-A9GJ-01A 9 59 CDS-5'UTR Inter-chr Transcription factor p35.3 Seq+ 64822 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IRF9-RNF31 IRF9 chr14 24631533 - RNF31 chr14 24629448 + Exonic hg19 LIHC TCGA-BC-A8YO-01A 180 200 Out-of-frame Intra-chr q12 Transcription factor q12 Seq+ 64823 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IRX1-ADAMTS16 IRX1 chr5 3596495 - ADAMTS16 chr5 5182157 + Exonic hg19 SKCM TCGA-BF-AAP6-01A 8 6 In-Frame Intra-chr p15.33 Tumor suppressor gene Transcription factor p15.32 Seq+ 64824 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IRX2-C5orf38 IRX2 chr5 2748459 - C5orf38 chr5 2755143 + Exonic hg19 SARC TCGA-DX-A7EI-01A 9 8 Out-of-frame Intra-chr p15.33 Transcription factor p15.33 Seq+ 64825 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ISCA1-WWP1 ISCA1 chr9 88897293 - WWP1 chr8 87447681 + Exonic hg19 SARC TCGA-DX-A1KZ-01A 9 15 Out-of-frame Inter-chr q21.33 q21.3 Seq+ 64826 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ISL2-AC087465.1 ISL2 chr15 76629282 - AC087465.1 chr15 77474382 - Exonic hg19 SKCM TCGA-DA-A3F5-06A 62 25 Out-of-frame Intra-chr q24.3 Transcription factor q24.3 64827 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ISY1-MASP1 ISY1 chr3 128875476 - MASP1 chr3 187003844 - Exonic hg19 LGG TCGA-HT-A5RA-01A 28 5 Out-of-frame Intra-chr q21.3 q27.3 Seq+ 64828 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITCH-AHCY ITCH chr20 32981687 - AHCY chr20 32883391 - Exonic hg19 BLCA TCGA-BT-A20V-01A 26 17 In-Frame Intra-chr q11.22 q11.22 Seq+ 64829 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITCH-ARFGAP1 ITCH chr20 33069011 - ARFGAP1 chr20 61914171 + Exonic hg19 BLCA TCGA-UY-A78N-01A 13 11 Out-of-frame Intra-chr q11.22 q13.33 Seq+ 64830 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITCH-DEFB118 ITCH chr20 33059320 - DEFB118 chr20 29960660 + Exonic hg19 HNSC TCGA-CV-5443-01A 172 80 Out-of-frame Intra-chr q11.22 q11.21 Seq+ 64831 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITCH-JMJD4 ITCH chr20 33033266 - JMJD4 chr1 227922517 - Exonic hg19 SKCM TCGA-BF-AAP4-01A 2 7 Out-of-frame Inter-chr q11.22 q42.13 Seq+ 64832 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITCH-MANBAL ITCH chr20 32996598 - MANBAL chr20 35944711 + Exonic hg19 COAD TCGA-CM-6170-01A 4 3 Out-of-frame Intra-chr q11.22 q11.23 Seq+ 64833 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITCH-MYL9 ITCH chr20 33080402 - MYL9 chr20 35176435 + Exonic hg19 LUAD TCGA-55-7815-01A 13 10 In-Frame Intra-chr q11.22 q11.23 Seq+ 64834 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITCH-PIGU ITCH chr20 33077731 - PIGU chr20 33148783 - Exonic hg19 COAD TCGA-G4-6303-01A 44 15 In-Frame Intra-chr q11.22 q11.22 Seq+ 64835 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITCH-PIGU ITCH chr20 33028149 - PIGU chr20 33148783 - Exonic hg19 PRAD TCGA-HC-7752-01A 13 20 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 64836 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITCH-RALY ITCH chr20 33033266 - RALY chr20 32619328 + Exonic hg19 BRCA TCGA-AC-A2BM-01A 3 5 CDS-5'UTR Intra-chr q11.22 q11.22 Seq+ 64837 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITCH-RALY ITCH chr20 33059320 - RALY chr20 32659872 + Exonic hg19 STAD TCGA-CG-4449-01A 15 8 CDS-5'UTR Intra-chr q11.22 q11.22 Seq+ 64838 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITCH-RALY ITCH chr20 32996598 - RALY chr20 32619328 + Exonic hg19 SKCM TCGA-D3-A2J6-06A 78 68 5'UTR-5'UTR Intra-chr q11.22 q11.22 Seq+ 64839 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITCH-RALY ITCH chr20 33028149 - RALY chr20 32619328 + Exonic hg19 UCS TCGA-N5-A4RA-01A 23 7 CDS-5'UTR Intra-chr q11.22 q11.22 Seq+ 64840 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITCH-SRC ITCH chr20 32957276 - SRC chr20 35993607 + Exonic hg19 COAD TCGA-NH-A50V-01A 4 3 5'UTR-5'UTR Intra-chr q11.22 q11.23 TK:Src Oncogene Seq+ 64841 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITCH-TAB1 ITCH chr20 32957276 - TAB1 chr22 39811011 + Exonic hg19 BRCA TCGA-BH-A0H7-01A 2 5 5'UTR-CDS Inter-chr q11.22 q13.1 Seq+ 64842 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITCH-TSHZ2 ITCH chr20 33012331 - TSHZ2 chr20 52103683 + Exonic hg19 LUAD TCGA-86-7955-01A 10 8 CDS-3'UTR Intra-chr q11.22 q13.2 Transcription factor Seq+ 64843 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITFG1-SLC45A2 ITFG1 chr16 47345151 - SLC45A2 chr5 33964121 - Exonic hg19 PRAD TCGA-ZG-A9L4-01A 7 8 Out-of-frame Inter-chr q12.1 p13.2 Seq+ 64844 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITFG3-ALDOB ITFG3 chr16 311504 - ALDOB chr9 104198056 - Exonic hg19 LIHC TCGA-G3-A25U-01A 2 1 Out-of-frame Inter-chr q31.1 64845 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITFG3-LUC7L ITFG3 chr16 299653 - LUC7L chr16 258187 - Exonic hg19 HNSC TCGA-CV-6940-01A 14 7 5'UTR-CDS Intra-chr p13.3 Seq+ 64846 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGA10-PEX11B ITGA10 chr1 145531026 - PEX11B chr1 145522514 + Exonic hg19 SARC TCGA-PC-A5DO-01A 3 2 In-Frame Intra-chr q21.1 Oncogene q21.1 Seq+ 64847 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGA11-ADAMTSL3 ITGA11 chr15 68606117 - ADAMTSL3 chr15 84639236 + Exonic hg19 SARC TCGA-DX-A8BM-01A 4 3 Out-of-frame Intra-chr q23 q25.2 Seq+ 64848 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGA2-CEACAM21 ITGA2 chr5 52379283 - CEACAM21 chr19 42083552 + Exonic hg19 LUSC TCGA-63-A5M9-01A 24 19 Out-of-frame Inter-chr q11.2 Seq+ 64849 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGA2-MYO18B ITGA2 chr5 52353931 - MYO18B chr22 26388329 + Exonic hg19 KIRP TCGA-P4-A5EB-01A 8 6 In-Frame Inter-chr q11.2 q12.1 Tumor suppressor gene Seq+ 64850 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGA2-PARP8 ITGA2 chr5 52285362 - PARP8 chr5 50055477 + Exonic hg19 CESC TCGA-VS-A8EI-01A 2 3 In-Frame Intra-chr q11.2 q11.1 Seq+ 64851 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGA2-RNF180 ITGA2 chr5 52285362 - RNF180 chr5 63621013 + Exonic hg19 KIRP TCGA-B9-A5W9-01A 17 3 Out-of-frame Intra-chr q11.2 q12.3 Tumor suppressor gene Seq+ 64852 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGA3-C17orf37 ITGA3 chr17 48134009 - C17orf37 chr17 37886544 - Exonic hg19 LUAD TCGA-44-3396-01A 119 83 Out-of-frame Intra-chr q21.33 64853 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGA3-EIF2AK2 ITGA3 chr17 48167848 - EIF2AK2 chr2 37342384 - Exonic hg19 KIRP TCGA-G7-6793-01A 2 3 Out-of-frame Inter-chr q21.33 p22.2 64854 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGA3-NDUFV1 ITGA3 chr17 48167844 - NDUFV1 chr11 67375697 + Exonic hg19 CESC TCGA-C5-A2LV-01A 2 18 Out-of-frame Inter-chr q21.33 q13.2 64855 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGA4-UBE2E2 ITGA4 chr2 182323044 - UBE2E2 chr3 23541099 + Exonic hg19 LGG TCGA-HT-7477-01B 5 9 Out-of-frame Inter-chr q31.3 p24.3 Seq+ 64856 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGA5-GTSF1 ITGA5 chr12 54795157 - GTSF1 chr12 54858951 - Exonic hg19 LUSC TCGA-39-5035-01A 2 2 Out-of-frame Intra-chr q13.13 Tumor suppressor gene q13.13 Seq+ 64857 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGA5-GTSF1 ITGA5 chr12 54801433 - GTSF1 chr12 54857081 - Exonic hg19 LIHC TCGA-BC-A217-01A 235 165 In-Frame Intra-chr q13.13 Tumor suppressor gene q13.13 Seq+ 64858 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGA6-HAT1 ITGA6 chr2 173292698 - HAT1 chr2 172809399 + Exonic hg19 STAD TCGA-BR-7901-01A 2 7 In-Frame Intra-chr q31.1 q31.1 Seq+ 64859 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGA6-MYO3B ITGA6 chr2 173292698 - MYO3B chr2 171191895 + Exonic hg19 PRAD TCGA-KK-A6E5-01A 3 1 In-Frame Intra-chr q31.1 q31.1 STE:STE20 64860 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGA6-UBE3B ITGA6 chr2 173371002 - UBE3B chr12 109919442 + Exonic hg19 HNSC TCGA-D6-A4Z9-01A 2 1 3'UTR-5'UTR Inter-chr q31.1 q24.11 64861 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGA8-FAM188A ITGA8 chr10 15713602 - FAM188A chr10 15889942 - Exonic hg19 SARC TCGA-IE-A4EH-01A 33 6 In-Frame Intra-chr p13 Tumor suppressor gene 64862 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGA9-HMOX2 ITGA9 chr3 37584076 - HMOX2 chr16 4533638 + Exonic hg19 PRAD TCGA-VN-A88P-01A 3 4 CDS-5'UTR Inter-chr p22.2 Oncogene p13.3 64863 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGA9-SEC13 ITGA9 chr3 37792060 - SEC13 chr3 10347376 - Exonic hg19 LUAD TCGA-MP-A4TK-01A 197 102 In-Frame Intra-chr p22.2 Oncogene p25.3 Seq+ 64864 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGA9-ZNF48 ITGA9 chr3 37584076 - ZNF48 chr16 30407101 + Exonic hg19 TGCT TCGA-YU-AA4L-01A 6 9 CDS-5'UTR Inter-chr p22.2 Oncogene p11.2 Transcription factor Seq+ 64865 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGAV-ARHGAP15 ITGAV chr2 187534541 - ARHGAP15 chr2 143986150 + Exonic hg19 SARC TCGA-VT-A80G-01A 16 5 Out-of-frame Intra-chr q32.1 Tumor suppressor gene q22.2 Seq+ 64866 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGAV-FARP2 ITGAV chr2 187534541 - FARP2 chr2 242429377 + Exonic hg19 LUSC TCGA-43-2578-01A 6 4 In-Frame Intra-chr q32.1 Tumor suppressor gene q37.3 Seq+ 64867 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGAV-IFT172 ITGAV chr2 187466878 - IFT172 chr2 27708370 - Exonic hg19 LIHC TCGA-UB-A7MA-01A 2 3 Out-of-frame Intra-chr q32.1 Tumor suppressor gene p23.3 Seq+ 64868 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGAV-PDE11A ITGAV chr2 187455250 - PDE11A chr2 178769914 - Exonic hg19 LUAD TCGA-44-A4SS-01A 13 7 Out-of-frame Intra-chr q32.1 Tumor suppressor gene q31.2 Seq+ 64869 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGAX-PHKG2 ITGAX chr16 31388586 - PHKG2 chr16 30764715 + Exonic hg19 BLCA TCGA-CU-A3KJ-01A 2 3 In-Frame Intra-chr p11.2 p11.2 64870 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGB1-DYM ITGB1 chr10 33214799 - DYM chr18 46798673 - Exonic hg19 BRCA TCGA-E2-A9RU-01A 4 1 In-Frame Inter-chr p11.22 Tumor suppressor gene q21.1 64871 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGB2-CD74 ITGB2 chr21 46351729 - CD74 chr5 149792295 - Exonic hg19 CESC TCGA-C5-A1MH-01A 2 1 Out-of-frame Inter-chr q22.3 Oncogene q33.1 64872 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGB4-MYO15B ITGB4 chr17 73717692 - MYO15B chr17 73620450 + Exonic hg19 OV TCGA-61-1917-01A 8 11 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 64873 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGB4-NARF ITGB4 chr17 73753188 - NARF chr17 80426640 + Exonic hg19 BRCA TCGA-A8-A08O-01A 3 2 Out-of-frame Intra-chr q25.1 q25.3 Seq+ 64874 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGB4-OTOP2 ITGB4 chr17 73717692 - OTOP2 chr17 72926374 + Exonic hg19 LUSC TCGA-60-2722-01A 6 2 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 64875 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGB4-PLEKHB2 ITGB4 chr17 73753898 - PLEKHB2 chr2 131876464 + Exonic hg19 HNSC TCGA-CV-5436-01A 2 9 Out-of-frame Inter-chr q25.1 q21.1 64876 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGB4-PTN ITGB4 chr17 73753898 - PTN chr7 136938384 - Exonic hg19 LUSC TCGA-85-A50M-01A 2 11 3'UTR-CDS Inter-chr q25.1 q33 64877 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGB4-SAP30BP ITGB4 chr17 73733725 - SAP30BP chr17 73689520 + Exonic hg19 LUAD TCGA-97-A4M3-01A 2 2 In-Frame Intra-chr q25.1 q25.1 Seq+ 64878 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGB4-SLC16A5 ITGB4 chr17 73747192 - SLC16A5 chr17 73094133 + Exonic hg19 BRCA TCGA-C8-A26X-01A 9 8 In-Frame Intra-chr q25.1 q25.1 Seq+ 64879 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGB4-TSPAN10 ITGB4 chr17 73747192 - TSPAN10 chr17 79612018 + Exonic hg19 LUAD TCGA-55-A4DF-01A 3 4 Out-of-frame Intra-chr q25.1 q25.3 Seq+ 64880 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGB5-HDAC9 ITGB5 chr3 124487860 - HDAC9 chr7 18535885 + Exonic hg19 UCEC TCGA-EO-A3AS-01A 4 5 In-Frame Inter-chr q21.2 p21.1 Seq+ 64881 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGB5-PARP14 ITGB5 chr3 124487860 - PARP14 chr3 122427037 + Exonic hg19 BRCA TCGA-AO-A03L-01A 14 6 Out-of-frame Intra-chr q21.2 q21.1 Seq+ 64882 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGB5-SLC12A8 ITGB5 chr3 124536468 - SLC12A8 chr3 124854626 - Exonic hg19 STAD TCGA-BR-4357-01A 3 4 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 64883 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGB5-ZNF148 ITGB5 chr3 124527869 - ZNF148 chr3 125032500 - Exonic hg19 STAD TCGA-BR-8373-01A 6 23 CDS-5'UTR Intra-chr q21.2 q21.2 Transcription factor Seq+ 64884 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGB6-CNOT2 ITGB6 chr2 160964190 - CNOT2 chr12 70731169 + Exonic hg19 SARC TCGA-DX-A6BG-01A 9 7 Out-of-frame Inter-chr q24.2 q15 Seq+ 64885 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGB6-RBMS1 ITGB6 chr2 161055690 - RBMS1 chr2 161141555 - Exonic hg19 LUSC TCGA-22-1005-01A 11 13 In-Frame Intra-chr q24.2 q24.2 Seq+ 64886 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGB6-RBMS1 ITGB6 chr2 161051880 - RBMS1 chr2 161174738 - Exonic hg19 BLCA TCGA-BT-A20W-01A 2 4 In-Frame Intra-chr q24.2 q24.2 Seq+ 64887 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGB6-RBMS1 ITGB6 chr2 161051880 - RBMS1 chr2 161174738 - Exonic hg19 HNSC TCGA-D6-8568-01A 2 4 In-Frame Intra-chr q24.2 q24.2 Seq+ 64888 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGB6-RBMS1 ITGB6 chr2 161030485 - RBMS1 chr2 161159998 - Exonic hg19 BRCA TCGA-D8-A1XK-01A 10 87 In-Frame Intra-chr q24.2 q24.2 Seq+ 64889 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGB6-RBMS1 ITGB6 chr2 160964190 - RBMS1 chr2 161141555 - Exonic hg19 BLCA TCGA-DK-A2I6-01A 8 21 In-Frame Intra-chr q24.2 q24.2 Seq+ 64890 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGB6-RBMS1 ITGB6 chr2 160998493 - RBMS1 chr2 161143595 - Exonic hg19 BLCA TCGA-ZF-A9R1-01A 3 10 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 64891 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITGB6-RBMS1 ITGB6 chr2 161025723 - RBMS1 chr2 161133894 - Exonic hg19 BLCA TCGA-ZF-AA51-01A 2 13 In-Frame Intra-chr q24.2 q24.2 Seq+ 64892 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITLN1-DCN ITLN1 chr1 160846329 - DCN chr12 91539511 - Exonic hg19 MESO TCGA-MQ-A4LI-01A 3 3 Out-of-frame Inter-chr q23.3 q21.33 Tumor suppressor gene 64893 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITLN1-NDUFV1 ITLN1 chr1 160846329 - NDUFV1 chr11 67375697 + Exonic hg19 MESO TCGA-ZN-A9VU-01A 2 3 Out-of-frame Inter-chr q23.3 q13.2 64894 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITM2B-ARFGEF2 ITM2B chr13 48835524 - ARFGEF2 chr20 47615777 + Exonic hg19 LUAD TCGA-44-7670-01A 2 4 Out-of-frame Inter-chr q14.2 q13.13 64895 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITM2B-CBS ITM2B chr13 48835524 - CBS chr21 44476011 - Exonic hg19 PRAD TCGA-G9-6371-01A 2 4 Out-of-frame Inter-chr q14.2 q22.3 64896 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITM2B-ESD ITM2B chr13 48807613 - ESD chr13 47367579 - Exonic hg19 LUSC TCGA-60-2706-01A 28 13 CDS-5'UTR Intra-chr q14.2 q14.2 Seq+ 64897 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITM2B-MATR3 ITM2B chr13 48807613 - MATR3 chr5 138665034 + Exonic hg19 OV TCGA-13-0799-01A 11 44 In-Frame Inter-chr q14.2 q31.2 Seq+ 64898 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITM2B-PHF15 ITM2B chr13 48835524 - PHF15 chr5 133861347 + Exonic hg19 KIRP TCGA-HE-7129-01A 2 3 Out-of-frame Inter-chr q14.2 64899 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITM2B-RPL30 ITM2B chr13 48835524 - RPL30 chr8 99058697 - Exonic hg19 KIRP TCGA-A4-A5Y1-01A 2 9 Out-of-frame Inter-chr q14.2 q22.2 64900 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITM2B-RPL30 ITM2B chr13 48835524 - RPL30 chr8 99058697 - Exonic hg19 CESC TCGA-EA-A5O9-01A 2 5 Out-of-frame Inter-chr q14.2 q22.2 64901 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITM2B-RPL30 ITM2B chr13 48835524 - RPL30 chr8 99058697 - Exonic hg19 KIRP TCGA-HE-A5NH-01A 2 8 Out-of-frame Inter-chr q14.2 q22.2 64902 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITM2B-RPL30 ITM2B chr13 48835524 - RPL30 chr8 99058697 - Exonic hg19 HNSC TCGA-MT-A51X-01A 2 4 Out-of-frame Inter-chr q14.2 q22.2 64903 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITM2C-FOXP1 ITM2C chr2 231743962 - FOXP1 chr3 71007472 - Exonic hg19 THYM TCGA-ZB-A962-01A 2 3 Out-of-frame Inter-chr q37.1 p13 Oncogene Tumor suppressor gene Transcription factor 64904 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITM2C-SEPT9 ITM2C chr2 231743963 - SEPT9 chr17 75398141 + Exonic hg19 LGG TCGA-HT-7478-01A 2 1 3'UTR-CDS Inter-chr q37.1 64905 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITM2C-THSD4 ITM2C chr2 231743962 - THSD4 chr15 72072881 + Exonic hg19 CESC TCGA-VS-A9UR-01A 2 1 Out-of-frame Inter-chr q37.1 q23 64906 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITM2C-TYK2 ITM2C chr2 231743962 - TYK2 chr19 10491352 - Exonic hg19 LGG TCGA-HT-7470-01A 2 7 Out-of-frame Inter-chr q37.1 p13.2 TK:JakA 64907 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITPA-SLC22A24 ITPA chr20 3194704 - SLC22A24 chr11 62847469 - Exonic hg19 BRCA TCGA-PL-A8LX-01A 3 2 Out-of-frame Inter-chr p13 q12.3 Seq+ 64908 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITPK1-ACO1 ITPK1 chr14 93581414 - ACO1 chr9 32405483 + Exonic hg19 BRCA TCGA-BH-A0HY-01A 70 59 CDS-5'UTR Inter-chr p21.1 Seq+ 64909 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITPK1-BTBD7 ITPK1 chr14 93418291 - BTBD7 chr14 93717998 - Exonic hg19 LUAD TCGA-38-4630-01A 12 10 In-Frame Intra-chr Seq+ 64910 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITPK1-BTBD7 ITPK1 chr14 93542940 - BTBD7 chr14 93730339 - Exonic hg19 ESCA TCGA-L5-A4ON-01A 4 33 Out-of-frame Intra-chr Seq+ 64911 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITPK1-CTD-2014B16.3 ITPK1 chr14 93460225 - CTD-2014B16.3 chr14 66455368 - Exonic hg19 SKCM TCGA-EE-A29P-06A 44 12 Out-of-frame Intra-chr 64912 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITPK1-KIAA0284 ITPK1 chr14 93581414 - KIAA0284 chr14 105334761 + Exonic hg19 LUSC TCGA-22-4593-01A 5 4 CDS-5'UTR Intra-chr 64913 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITPK1-SPINK4 ITPK1 chr14 93581414 - SPINK4 chr9 33218363 + Exonic hg19 LIHC TCGA-DD-A73D-01A 6 10 CDS-5'UTR Inter-chr p13.3 Seq+ 64914 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITPKA-NUSAP1 ITPKA chr15 41786614 - NUSAP1 chr15 41634584 + Exonic hg19 ACC TCGA-OR-A5J9-01A 12 4 In-Frame Intra-chr q15.1 q15.1 Seq+ 64915 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITPKA-RTF1 ITPKA chr15 41786614 - RTF1 chr15 41745099 + Exonic hg19 LUSC TCGA-85-8071-01A 2 1 In-Frame Intra-chr q15.1 q15.1 64916 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITPKB-ZC3HAV1 ITPKB chr1 226923228 - ZC3HAV1 chr7 138749745 - Exonic hg19 BRCA TCGA-AO-A0J2-01A 9 9 In-Frame Inter-chr q42.12 q34 Seq+ 64917 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITPKC-SPTBN4 ITPKC chr19 41231344 - SPTBN4 chr19 41071329 + Exonic hg19 BRCA TCGA-BH-A18V-06A 5 4 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 64918 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITPKC-SPTBN4 ITPKC chr19 41231344 - SPTBN4 chr19 41071329 + Exonic hg19 PAAD TCGA-RB-AA9M-01A 6 2 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 64919 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITPR1-SETMAR ITPR1 chr3 4695570 - SETMAR chr3 4354582 + Exonic hg19 KIRC TCGA-BP-5195-01A 16 6 In-Frame Intra-chr p26.1 p26.1 Seq+ 64920 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITPR1-SUMF1 ITPR1 chr3 4536190 - SUMF1 chr3 4110429 - Exonic hg19 LUSC TCGA-22-5477-01A 6 2 Out-of-frame Intra-chr p26.1 p26.1 Seq+ 64921 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITPR2-ADIPOR2 ITPR2 chr12 26943090 - ADIPOR2 chr12 1882008 + Exonic hg19 LGG TCGA-HT-7690-01A 18 20 Out-of-frame Intra-chr p11.23 p13.33 Seq+ 64922 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITPR2-ANO2 ITPR2 chr12 26580846 - ANO2 chr12 5941769 - Exonic hg19 BRCA TCGA-A7-A4SD-01A 25 13 In-Frame Intra-chr p11.23 p13.31 Seq+ 64923 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITPR2-CLEC2A ITPR2 chr12 26703180 - CLEC2A chr12 10074831 - Exonic hg19 PRAD TCGA-EJ-7788-01A 40 30 Out-of-frame Intra-chr p11.23 p13.31 Seq+ 64924 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITPR2-CLIC1 ITPR2 chr12 26943090 - CLIC1 chr6 31704127 - Exonic hg19 LIHC TCGA-MI-A75I-01A 18 6 CDS-5'UTR Inter-chr p11.23 Seq+ 64925 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITPR2-DCDC2 ITPR2 chr12 26780966 - DCDC2 chr6 24278439 - Exonic hg19 LIHC TCGA-DD-A1EJ-01A 11 10 Out-of-frame Inter-chr p11.23 p22.3 Tumor suppressor gene Seq+ 64926 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITPR2-RAD17 ITPR2 chr12 26553061 - RAD17 chr5 68706320 + Exonic hg19 STAD TCGA-BR-8678-01A 3 8 Out-of-frame Inter-chr p11.23 Seq+ 64927 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITPR2-RASSF3 ITPR2 chr12 26943090 - RASSF3 chr12 65078567 + Exonic hg19 LUAD TCGA-55-1592-01A 4 10 Out-of-frame Intra-chr p11.23 q14.2 Tumor suppressor gene Seq+ 64928 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITPR3-AL353597.1 ITPR3 chr6 33627326 - AL353597.1 chr6 37502052 + Exonic hg19 BRCA TCGA-EW-A1P4-01A 2 4 Out-of-frame Intra-chr p21.31 p21.2 64929 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITPR3-SYNGAP1 ITPR3 chr6 33646616 - SYNGAP1 chr6 33391254 + Exonic hg19 STAD TCGA-FP-8631-01A 6 5 Out-of-frame Intra-chr p21.31 Seq+ 64930 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITSN1-C21orf7 ITSN1 chr21 35015019 - C21orf7 chr21 30532262 + Exonic hg19 THYM TCGA-ZB-A969-01A 171 187 5'UTR-CDS Intra-chr q22.11 Seq+ 64931 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITSN1-CHODL ITSN1 chr21 35015019 - CHODL chr21 19289537 + Exonic hg19 HNSC TCGA-CQ-A4CH-01A 16 10 Out-of-frame Intra-chr q22.11 q21.1 Seq+ 64932 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITSN1-HNRNPUL1 ITSN1 chr21 35127702 - HNRNPUL1 chr19 41808570 + Exonic hg19 SARC TCGA-DX-A3UA-01A 35 9 In-Frame Inter-chr q22.11 q13.2 Seq+ 64933 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITSN1-KIAA1211 ITSN1 chr21 35015019 - KIAA1211 chr4 57045450 + Exonic hg19 BRCA TCGA-A1-A0SO-01A 2 5 5'UTR-5'UTR Inter-chr q22.11 q12 Seq+ 64934 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITSN1-NEBL ITSN1 chr21 35015019 - NEBL chr10 21139431 - Exonic hg19 LUAD TCGA-O1-A52J-01A 33 11 5'UTR-CDS Inter-chr q22.11 p12.31 Seq+ 64935 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITSN2-KIDINS220 ITSN2 chr2 24498582 - KIDINS220 chr2 8926487 - Exonic hg19 SKCM TCGA-D3-A3CF-06A 17 9 In-Frame Intra-chr p23.3 p25.1 Seq+ 64936 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITSN2-MYO10 ITSN2 chr2 24583173 - MYO10 chr5 16818276 - Exonic hg19 SKCM TCGA-D3-A3CF-06A 16 22 5'UTR-CDS Inter-chr p23.3 p15.1 Seq+ 64937 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ITSN2-NMT1 ITSN2 chr2 24468998 - NMT1 chr17 43171053 + Exonic hg19 BRCA TCGA-E2-A1LE-01A 5 3 In-Frame Inter-chr p23.3 q21.31 Seq+ 64938 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq IYD-BIRC6 IYD chr6 150725764 - BIRC6 chr2 32820101 + Exonic hg19 THCA TCGA-EM-A4FK-01A 2 3 3'UTR-CDS Inter-chr q25.1 p22.3 64939 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JAG1-C20orf94 JAG1 chr20 10622108 - C20orf94 chr20 10582379 + Exonic hg19 CESC TCGA-MY-A5BE-01A 2 5 Out-of-frame Intra-chr p12.2 64940 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JAK1-HSD11B1 JAK1 chr1 65432016 - HSD11B1 chr1 209878262 + Exonic hg19 OV TCGA-09-1667-01C 2 1 5'UTR-5'UTR Intra-chr p31.3 TK:JakA Oncogene q32.2 Seq+ 64941 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JAK2-CSTF3 JAK2 chr9 4986022 - CSTF3 chr11 33108687 - Exonic hg19 LUAD TCGA-83-5908-01A 3 3 5'UTR-CDS Inter-chr p24.1 TK:JakA Oncogene p13 Seq+ 64942 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JAK2-CTD-2021H9.3 JAK2 chr9 5029906 - CTD-2021H9.3 chr12 71441459 - Exonic hg19 SKCM TCGA-D3-A51H-06A 5 2 Out-of-frame Inter-chr p24.1 TK:JakA Oncogene 64943 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JAK2-DOCK8 JAK2 chr9 5055788 - DOCK8 chr9 286461 + Exonic hg19 SKCM TCGA-WE-A8ZN-06A 8 1 In-Frame Intra-chr p24.1 TK:JakA Oncogene p24.3 Seq+ 64944 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JAK2-GLDC JAK2 chr9 5029906 - GLDC chr9 6565429 - Exonic hg19 HNSC TCGA-HD-7229-01A 2 1 In-Frame Intra-chr p24.1 TK:JakA Oncogene p24.1 Seq+ 64945 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JAK2-PKNOX2 JAK2 chr9 4986022 - PKNOX2 chr11 125201715 + Exonic hg19 SARC TCGA-DX-A23R-01A 3 1 5'UTR-5'UTR Inter-chr p24.1 TK:JakA Oncogene q24.2 Transcription factor 64946 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JAK2-RCL1 JAK2 chr9 5090911 - RCL1 chr9 4834141 + Exonic hg19 CESC TCGA-PN-A8MA-01A 38 23 Out-of-frame Intra-chr p24.1 TK:JakA Oncogene p24.1 Seq+ 64947 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JARID2-ATM JARID2 chr6 15246815 - ATM chr11 108213949 + Exonic hg19 LUAD TCGA-50-6594-01A 10 6 In-Frame Inter-chr p22.3 q22.3 Atypical:PIKK Oncogene Tumor suppressor gene Seq+ 64948 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JARID2-BMP6 JARID2 chr6 15410596 - BMP6 chr6 7879307 + Exonic hg19 BRCA TCGA-E2-A9RU-01A 7 11 Out-of-frame Intra-chr p22.3 p24.3 Seq+ 64949 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JARID2-CDKAL1 JARID2 chr6 15410596 - CDKAL1 chr6 20649524 + Exonic hg19 BLCA TCGA-KQ-A41R-01A 12 6 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 64950 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JARID2-DNM3 JARID2 chr6 15246815 - DNM3 chr1 171890888 + Exonic hg19 SARC TCGA-DX-A1L3-01A 9 6 Out-of-frame Inter-chr p22.3 q24.3 Seq+ 64951 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JARID2-DTNBP1 JARID2 chr6 15246815 - DTNBP1 chr6 15638035 - Exonic hg19 LUSC TCGA-98-A53A-01A 2 1 Out-of-frame Intra-chr p22.3 p22.3 64952 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JARID2-HFE JARID2 chr6 15452406 - HFE chr6 26091069 + Exonic hg19 HNSC TCGA-MZ-A7D7-01A 8 7 In-Frame Intra-chr p22.3 p22.2 Seq+ 64953 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JARID2-HIVEP1 JARID2 chr6 15501640 - HIVEP1 chr6 12129992 + Exonic hg19 BLCA TCGA-DK-AA76-01A 2 1 In-Frame Intra-chr p22.3 p24.1 Tumor suppressor gene Transcription factor 64954 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JARID2-HSD3B1 JARID2 chr6 15246815 - HSD3B1 chr1 120050015 + Exonic hg19 LUAD TCGA-44-8117-01A 10 3 CDS-5'UTR Inter-chr p22.3 p12 Seq+ 64955 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JARID2-NEDD9 JARID2 chr6 15246815 - NEDD9 chr6 11306388 - Exonic hg19 SKCM TCGA-ER-A3EV-06A 4 9 CDS-5'UTR Intra-chr p22.3 p24.2 Seq+ 64956 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JARID2-PPP1R10 JARID2 chr6 15374483 - PPP1R10 chr6 30584775 - Exonic hg19 BLCA TCGA-K4-A3WV-01A 94 57 CDS-5'UTR Intra-chr p22.3 Seq+ 64957 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JARID2-SGCZ JARID2 chr6 15246815 - SGCZ chr8 14022211 - Exonic hg19 BLCA TCGA-FD-A6TG-01A 3 1 Out-of-frame Inter-chr p22.3 p22 64958 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JAZF1-CPT1C JAZF1 chr7 28220082 - CPT1C chr19 50211980 + Exonic hg19 GBM TCGA-32-1970-01A 6 14 Out-of-frame Inter-chr p15.1 Transcription factor q13.33 Seq+ 64959 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JAZF1-CREB5 JAZF1 chr7 28220082 - CREB5 chr7 28609983 + Exonic hg19 SKCM TCGA-YG-AA3O-06A 67 56 Out-of-frame Intra-chr p15.1 Transcription factor p15.1 Transcription factor Seq+ 64960 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JAZF1-EVX1 JAZF1 chr7 28220082 - EVX1 chr7 27284667 + Exonic hg19 SARC TCGA-FX-A2QS-01A 48 30 In-Frame Intra-chr p15.1 Transcription factor p15.2 Transcription factor Seq+ 64961 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JAZF1-SFRP4 JAZF1 chr7 28031528 - SFRP4 chr7 37966376 - Exonic hg19 LUSC TCGA-68-A59I-01A 4 3 CDS-5'UTR Intra-chr p15.1 Transcription factor p14.1 Tumor suppressor gene Seq+ 64962 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JAZF1-SNX13 JAZF1 chr7 28220082 - SNX13 chr7 17931258 - Exonic hg19 LGG TCGA-DU-A5TY-01A 13 11 Out-of-frame Intra-chr p15.1 Transcription factor p21.1 Seq+ 64963 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JDP2-FAM164C JDP2 chr14 75904824 - FAM164C chr14 75544235 + Exonic hg19 STAD TCGA-BR-4366-01A 56 50 Out-of-frame Intra-chr q24.3 Tumor suppressor gene Transcription factor 64964 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JDP2-FAM164C JDP2 chr14 75928233 - FAM164C chr14 75544235 + Exonic hg19 LIHC TCGA-DD-A1EI-01A 2 1 Out-of-frame Intra-chr q24.3 Tumor suppressor gene Transcription factor 64965 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JDP2-PLEKHH1 JDP2 chr14 75904824 - PLEKHH1 chr14 68008551 + Exonic hg19 OV TCGA-29-A5NZ-01A 3 10 CDS-5'UTR Intra-chr q24.3 Tumor suppressor gene Transcription factor q24.1 Seq+ 64966 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JDP2-VRTN JDP2 chr14 75928233 - VRTN chr14 74823486 + Exonic hg19 BRCA TCGA-C8-A26X-01A 20 19 CDS-5'UTR Intra-chr q24.3 Tumor suppressor gene Transcription factor q24.3 Seq+ 64967 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JDP2-YLPM1 JDP2 chr14 75904824 - YLPM1 chr14 75276083 + Exonic hg19 STAD TCGA-BR-4357-01A 13 9 In-Frame Intra-chr q24.3 Tumor suppressor gene Transcription factor q24.3 64968 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JHDM1D-AGK JHDM1D chr7 139876544 - AGK chr7 141349063 + Exonic hg19 PRAD TCGA-J4-AATZ-01A 17 11 Out-of-frame Intra-chr Seq+ 64969 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JHDM1D-BRAF JHDM1D chr7 139810895 - BRAF chr7 140481493 - Exonic hg19 PRAD TCGA-CH-5737-01A 5 2 In-Frame Intra-chr q34 TKL:RAF Oncogene 64970 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JHDM1D-SND1 JHDM1D chr7 139793856 - SND1 chr7 127631000 + Exonic hg19 BRCA TCGA-B6-A0IN-01A 2 4 Out-of-frame Intra-chr q32.1 64971 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JMJD1C-ANK3 JMJD1C chr10 65024411 - ANK3 chr10 62374982 - Exonic hg19 PRAD TCGA-J4-A83I-01A 14 4 In-Frame Intra-chr q21.3 q21.2 Seq+ 64972 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JMJD1C-NRBF2 JMJD1C chr10 65024411 - NRBF2 chr10 64905969 + Exonic hg19 GBM TCGA-76-4929-01A 4 14 In-Frame Intra-chr q21.3 q21.3 Seq+ 64973 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JPH1-LY96 JPH1 chr8 75149443 - LY96 chr8 74922236 + Exonic hg19 COAD TCGA-AY-A71X-01A 3 1 3'UTR-CDS Intra-chr q21.11 q21.11 64974 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JTB-CYP1B1 JTB chr1 153946988 - CYP1B1 chr2 38303323 - Exonic hg19 PRAD TCGA-HC-7738-01A 2 1 3'UTR-5'UTR Inter-chr q21.3 p22.2 64975 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JUB-CEP192 JUB chr14 23445854 - CEP192 chr18 13087016 + Exonic hg19 CHOL TCGA-W6-AA0S-01A 20 21 Out-of-frame Inter-chr p11.21 64976 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JUNB-SEC63 JUNB chr19 12904124 - SEC63 chr6 108214782 - Exonic hg19 THCA TCGA-CE-A481-01A 2 5 Out-of-frame Inter-chr p13.13 Transcription factor q21 64977 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JUP-ACLY JUP chr17 39942840 - ACLY chr17 40035177 - Exonic hg19 BLCA TCGA-ZF-A9RD-01A 25 18 5'UTR-CDS Intra-chr q21.2 Tumor suppressor gene q21.2 Seq+ 64978 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JUP-CCT5 JUP chr17 39775692 - CCT5 chr5 10250033 + Exonic hg19 CESC TCGA-EK-A2RE-01A 2 3 Out-of-frame Inter-chr q21.2 Tumor suppressor gene p15.2 64979 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JUP-EIF2AK2 JUP chr17 39775692 - EIF2AK2 chr2 37342384 - Exonic hg19 LUSC TCGA-85-8582-01A 2 1 Out-of-frame Inter-chr q21.2 Tumor suppressor gene p22.2 64980 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JUP-NDUFV1 JUP chr17 39775692 - NDUFV1 chr11 67375697 + Exonic hg19 CESC TCGA-C5-A2LV-01A 2 3 Out-of-frame Inter-chr q21.2 Tumor suppressor gene q13.2 64981 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq JUP-PTN JUP chr17 39910856 - PTN chr7 136938384 - Exonic hg19 CESC TCGA-C5-A1MP-01A 2 2 3'UTR-CDS Inter-chr q21.2 Tumor suppressor gene q33 64982 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAL1-ARHGEF26 KAL1 chrX 8667739 - ARHGEF26 chr3 153905474 + Exonic hg19 BRCA TCGA-A2-A4RW-01A 9 3 Out-of-frame Inter-chr 64983 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KALRN-CREB5 KALRN chr3 124352800 - CREB5 chr7 28527793 + Exonic hg19 UCEC TCGA-A5-A1OH-01A 8 3 In-Frame Inter-chr q21.1 p15.1 Transcription factor Seq+ 64984 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KANK1-DOCK8 KANK1 chr9 504754 - DOCK8 chr9 463517 + Exonic hg19 LUAD TCGA-05-4426-01A 13 10 5'UTR-CDS Intra-chr p24.3 Tumor suppressor gene p24.3 Seq+ 64985 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KANK1-DOCK8 KANK1 chr9 713464 - DOCK8 chr9 396785 + Exonic hg19 BRCA TCGA-AN-A0XL-01A 7 5 Out-of-frame Intra-chr p24.3 Tumor suppressor gene p24.3 Seq+ 64986 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KANK1-DOCK8 KANK1 chr9 677009 - DOCK8 chr9 304581 + Exonic hg19 COAD TCGA-CA-6716-01A 14 14 Out-of-frame Intra-chr p24.3 Tumor suppressor gene p24.3 Seq+ 64987 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KANK1-DOCK8 KANK1 chr9 504754 - DOCK8 chr9 441875 + Exonic hg19 HNSC TCGA-F7-A50J-01A 4 31 5'UTR-CDS Intra-chr p24.3 Tumor suppressor gene p24.3 Seq+ 64988 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KANK1-NFX1 KANK1 chr9 707247 - NFX1 chr9 33338508 + Exonic hg19 BLCA TCGA-DK-A3IQ-01A 2 1 5'UTR-CDS Intra-chr p24.3 Tumor suppressor gene p13.3 Transcription factor Seq+ 64989 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KANK1-TPD52L3 KANK1 chr9 540667 - TPD52L3 chr9 6330182 + Exonic hg19 KIRC TCGA-BP-4983-01A 47 26 5'UTR-CDS Intra-chr p24.3 Tumor suppressor gene p24.1 Seq+ 64990 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KANK1-UHRF2 KANK1 chr9 540667 - UHRF2 chr9 6420912 + Exonic hg19 KIRC TCGA-BP-4983-01A 9 15 5'UTR-5'UTR Intra-chr p24.3 Tumor suppressor gene p24.1 Tumor suppressor gene Seq+ 64991 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KANK3-SPC24 KANK3 chr19 8399384 - SPC24 chr19 11259914 - Exonic hg19 OV TCGA-36-1576-01A 3 1 In-Frame Intra-chr p13.2 p13.2 Seq+ 64992 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KARS-C9orf46 KARS chr16 75674082 - C9orf46 chr9 5361888 - Exonic hg19 UCS TCGA-N5-A4RV-01A 22 19 Out-of-frame Inter-chr q23.1 64993 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT2A-STAT5B KAT2A chr17 40269053 - STAT5B chr17 40354826 - Exonic hg19 BLCA TCGA-FD-A3NA-01A 6 3 Out-of-frame Intra-chr q21.2 q21.2 Transcription factor Seq+ 64994 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT6A-ADAM2 KAT6A chr8 41905896 - ADAM2 chr8 39627094 - Exonic hg19 BRCA TCGA-E2-A15A-01A 226 151 Out-of-frame Intra-chr p11.21 Oncogene Seq+ 64995 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT6A-ADAM2 KAT6A chr8 41905896 - ADAM2 chr8 39627094 - Exonic hg19 BRCA TCGA-E2-A15A-06A 96 63 Out-of-frame Intra-chr p11.21 Oncogene Seq+ 64996 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT6A-AGPAT6 KAT6A chr8 41832222 - AGPAT6 chr8 41455811 + Exonic hg19 LUSC TCGA-85-8666-01A 2 4 CDS-5'UTR Intra-chr p11.21 Oncogene 64997 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT6A-CREBBP KAT6A chr8 41794774 - CREBBP chr16 3901010 - Exonic hg19 LAML TCGA-AB-2910-03A 6 13 In-Frame Inter-chr p11.21 Oncogene p13.3 Oncogene Tumor suppressor gene KB Pub Seq+ 64998 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT6A-CSMD1 KAT6A chr8 41905896 - CSMD1 chr8 4495080 - Exonic hg19 LUSC TCGA-43-8115-01A 3 4 Out-of-frame Intra-chr p11.21 Oncogene p23.2 Tumor suppressor gene Seq+ 64999 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT6A-GOT1L1 KAT6A chr8 41905896 - GOT1L1 chr8 37794575 - Exonic hg19 LUAD TCGA-69-8255-01A 4 3 In-Frame Intra-chr p11.21 Oncogene p11.23 65000 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT6A-IKBKB KAT6A chr8 41905896 - IKBKB chr8 42146152 + Exonic hg19 BRCA TCGA-A8-A06T-01A 11 7 In-Frame Intra-chr p11.21 Oncogene p11.21 Oncogene Seq+ 65001 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT6A-IKBKB KAT6A chr8 41905896 - IKBKB chr8 42162705 + Exonic hg19 BRCA TCGA-AO-A03P-01A 8 4 Out-of-frame Intra-chr p11.21 Oncogene p11.21 Oncogene Seq+ 65002 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT6A-KLK4 KAT6A chr8 41798360 - KLK4 chr19 51412085 - Exonic hg19 BRCA TCGA-AC-A5XU-01A 8 5 Out-of-frame Inter-chr p11.21 Oncogene q13.41 Seq+ 65003 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT6A-MSR1 KAT6A chr8 41905896 - MSR1 chr8 16035501 - Exonic hg19 BRCA TCGA-BH-A202-01A 55 42 CDS-5'UTR Intra-chr p11.21 Oncogene p22 Seq+ 65004 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT6A-RAB11FIP1 KAT6A chr8 41905896 - RAB11FIP1 chr8 37735069 - Exonic hg19 LUAD TCGA-69-8255-01A 6 2 Out-of-frame Intra-chr p11.21 Oncogene p11.23 Seq+ 65005 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT6A-TRAPPC9 KAT6A chr8 41905896 - TRAPPC9 chr8 141034176 - Exonic hg19 PRAD TCGA-KK-A7AW-01A 2 3 In-Frame Intra-chr p11.21 Oncogene q24.3 Seq+ 65006 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT6A-VDAC3 KAT6A chr8 41844973 - VDAC3 chr8 42251363 + Exonic hg19 PRAD TCGA-Y6-A9XI-01A 8 2 CDS-5'UTR Intra-chr p11.21 Oncogene p11.21 Seq+ 65007 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT6A-VPS13B KAT6A chr8 41838364 - VPS13B chr8 100568678 + Exonic hg19 BLCA TCGA-K4-A6MB-01A 2 1 Out-of-frame Intra-chr p11.21 Oncogene q22.2 65008 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT6B-ADK KAT6B chr10 76603236 - ADK chr10 76429941 + Exonic hg19 LUAD TCGA-05-4420-01A 4 5 Out-of-frame Intra-chr Oncogene q22.2 Seq+ 65009 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT6B-ADK KAT6B chr10 76603236 - ADK chr10 76468079 + Exonic hg19 OV TCGA-13-1495-01A 11 11 Out-of-frame Intra-chr Oncogene q22.2 Seq+ 65010 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT6B-ADK KAT6B chr10 76603236 - ADK chr10 76349040 + Exonic hg19 OV TCGA-24-1553-01A 7 7 In-Frame Intra-chr Oncogene q22.2 Seq+ 65011 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT6B-ADK KAT6B chr10 76603236 - ADK chr10 76429941 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 47 31 Out-of-frame Intra-chr Oncogene q22.2 Seq+ 65012 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT6B-ADK KAT6B chr10 76603236 - ADK chr10 76349040 + Exonic hg19 BRCA TCGA-E2-A574-01A 22 13 In-Frame Intra-chr Oncogene q22.2 Seq+ 65013 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT6B-ADK KAT6B chr10 76603236 - ADK chr10 76349040 + Exonic hg19 BLCA TCGA-KQ-A41N-01A 5 2 In-Frame Intra-chr Oncogene q22.2 Seq+ 65014 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT6B-C10orf96 KAT6B chr10 76741686 - C10orf96 chr10 118100246 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 375 214 In-Frame Intra-chr Oncogene Seq+ 65015 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT6B-CORO7 KAT6B chr10 76785007 - CORO7 chr16 4445340 - Exonic hg19 PRAD TCGA-YL-A8HL-01A 13 2 Out-of-frame Inter-chr Oncogene p13.3 Seq+ 65016 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT6B-DDX4 KAT6B chr10 76748870 - DDX4 chr5 55034778 + Exonic hg19 BRCA TCGA-E9-A228-01A 8 9 CDS-5'UTR Inter-chr Oncogene q11.2 Seq+ 65017 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT6B-KIAA1267 KAT6B chr10 76603236 - KIAA1267 chr17 44111651 - Exonic hg19 SARC TCGA-HS-A5N8-01A 19 8 Out-of-frame Inter-chr Oncogene 65018 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT6B-RTKN2 KAT6B chr10 76785007 - RTKN2 chr10 64000954 - Exonic hg19 BRCA TCGA-A2-A25B-01A 2 4 In-Frame Intra-chr Oncogene q21.2 65019 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT6B-SH3BP5L KAT6B chr10 76603236 - SH3BP5L chr1 249119565 - Exonic hg19 PRAD TCGA-VP-A875-01A 7 9 CDS-5'UTR Inter-chr Oncogene q44 Seq+ 65020 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT7-AXIN2 KAT7 chr17 47869395 - AXIN2 chr17 63554854 - Exonic hg19 BRCA TCGA-A8-A076-01A 9 7 CDS-5'UTR Intra-chr q21.33 Transcription factor q24.1 Tumor suppressor gene Seq+ 65021 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT7-F10 KAT7 chr17 47875920 - F10 chr13 113792771 + Exonic hg19 SARC TCGA-SI-A71O-01A 16 8 Out-of-frame Inter-chr q21.33 Transcription factor q34 Seq+ 65022 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT7-F10 KAT7 chr17 47875920 - F10 chr13 113792771 + Exonic hg19 SARC TCGA-SI-A71O-06A 35 20 Out-of-frame Inter-chr q21.33 Transcription factor q34 Seq+ 65023 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAT7-IGF2BP1 KAT7 chr17 47886570 - IGF2BP1 chr17 47076471 + Exonic hg19 THCA TCGA-EM-A2CM-01A 6 2 Out-of-frame Intra-chr q21.33 Transcription factor q21.32 Seq+ 65024 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KATNA1-LATS1 KATNA1 chr6 149944239 - LATS1 chr6 150005728 - Exonic hg19 BRCA TCGA-JL-A3YW-01A 2 1 Out-of-frame Intra-chr q25.1 q25.1 AGC:NDR Tumor suppressor gene 65025 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KATNA1-PPP2R1A KATNA1 chr6 149922730 - PPP2R1A chr19 52719782 + Exonic hg19 BRCA TCGA-A8-A08I-01A 73 66 In-Frame Inter-chr q25.1 q13.41 Oncogene Seq+ 65026 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KATNA1-RALYL KATNA1 chr6 149969605 - RALYL chr8 85441534 + Exonic hg19 SARC TCGA-DX-A1KZ-01A 5 1 5'UTR-5'UTR Inter-chr q25.1 q21.2 Seq+ 65027 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KATNAL1-CUL4A KATNAL1 chr13 30857753 - CUL4A chr13 113907396 + Exonic hg19 SKCM TCGA-D3-A5GR-06A 277 141 In-Frame Intra-chr q12.3 q34 Seq+ 65028 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KATNAL1-WASF3 KATNAL1 chr13 30881077 - WASF3 chr13 27241654 + Exonic hg19 BRCA TCGA-E9-A248-01A 4 1 5'UTR-CDS Intra-chr q12.3 q12.13 Seq+ 65029 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAZN-MTOR KAZN chr1 15251068 - MTOR chr1 11206848 - Exonic hg19 UCEC TCGA-D1-A3JQ-01A 4 11 In-Frame Intra-chr p36.21 p36.22 Oncogene Seq+ 65030 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KAZN-ST3GAL3 KAZN chr1 15287371 - ST3GAL3 chr1 44360055 + Exonic hg19 BRCA TCGA-BH-A1FC-01A 12 2 Out-of-frame Intra-chr p36.21 p34.1 Seq+ 65031 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KBTBD2-NT5C3 KBTBD2 chr7 32931148 - NT5C3 chr7 33075600 - Exonic hg19 LIHC TCGA-ED-A7PX-01A 3 4 5'UTR-5'UTR Intra-chr p14.3 Seq+ 65032 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCMF1-DNAH6 KCMF1 chr2 85198590 - DNAH6 chr2 85023430 + Exonic hg19 STAD TCGA-BR-8361-01A 32 169 In-Frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 65033 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCMF1-GGCX KCMF1 chr2 85198590 - GGCX chr2 85783383 - Exonic hg19 PRAD TCGA-HC-A76X-01A 4 4 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 65034 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCMF1-PRKDC KCMF1 chr2 85255179 - PRKDC chr8 48772320 - Exonic hg19 BRCA TCGA-EW-A1P4-01A 48 23 In-Frame Inter-chr p11.2 Transcription factor q11.21 Oncogene Seq+ 65035 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNA6-C3AR1 KCNA6 chr12 4923944 - C3AR1 chr12 8212791 - Exonic hg19 LGG TCGA-DH-A66G-01A 15 1 3'UTR-5'UTR Intra-chr p13.31 65036 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNAB1-KHDRBS1 KCNAB1 chr3 156249286 - KHDRBS1 chr1 32502511 + Exonic hg19 SARC TCGA-IW-A3M6-01A 2 6 In-Frame Inter-chr q25.31 p35.2 65037 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNAB1-LRTM1 KCNAB1 chr3 156233009 - LRTM1 chr3 54959242 - Exonic hg19 PCPG TCGA-QT-A5XO-01A 2 2 In-Frame Intra-chr q25.31 p14.3 Seq+ 65038 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNAB2-KIF1B KCNAB2 chr1 6052848 - KIF1B chr1 10316305 + Exonic hg19 LGG TCGA-DU-6395-01A 2 3 5'UTR-CDS Intra-chr p36.31 p36.22 Tumor suppressor gene Seq+ 65039 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNAB2-POLB KCNAB2 chr1 6052848 - POLB chr8 42202471 + Exonic hg19 LUSC TCGA-46-6025-01A 22 22 5'UTR-CDS Inter-chr p36.31 p11.21 Seq+ 65040 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNB1-ZFPM2 KCNB1 chr20 48098451 - ZFPM2 chr8 106431372 + Exonic hg19 LGG TCGA-TM-A84H-01A 9 3 Out-of-frame Inter-chr q13.13 q22.3 Transcription factor Seq+ 65041 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNC3-ASPDH KCNC3 chr19 50831470 - ASPDH chr19 51015547 - Exonic hg19 BRCA TCGA-EW-A6S9-01A 2 1 Out-of-frame Intra-chr q13.33 q13.33 65042 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNC3-PRKDC KCNC3 chr19 50823850 - PRKDC chr8 48730122 - Exonic hg19 CESC TCGA-VS-A8EI-01A 2 4 In-Frame Inter-chr q13.33 q11.21 Oncogene Seq+ 65043 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNC4-GSTM4 KCNC4 chr1 110768800 - GSTM4 chr1 110207633 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 10 9 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 65044 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNE2-HTN3 KCNE2 chr21 35736450 - HTN3 chr4 70898884 + Exonic hg19 BRCA TCGA-A8-A06U-01A 2 2 5'UTR-CDS Inter-chr q22.11 65045 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNH1-LPGAT1 KCNH1 chr1 211192206 - LPGAT1 chr1 212002665 - Exonic hg19 BRCA TCGA-EW-A6SA-01A 11 5 CDS-5'UTR Intra-chr q32.3 Seq+ 65046 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNJ10-CISD2 KCNJ10 chr1 160039812 - CISD2 chr4 103806373 + Exonic hg19 LGG TCGA-E1-5304-01A 170 66 5'UTR-CDS Inter-chr q23.2 q24 Seq+ 65047 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNJ3-GALNT13 KCNJ3 chr2 155566331 - GALNT13 chr2 155252503 + Exonic hg19 BRCA TCGA-BH-A1FM-01A 12 19 In-Frame Intra-chr q24.1 q23.3 Seq+ 65048 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNK1-CCDC64 KCNK1 chr1 233750272 - CCDC64 chr12 120509426 + Exonic hg19 COAD TCGA-AZ-6607-01A 5 1 Out-of-frame Inter-chr q42.2 65049 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNK13-TDP1 KCNK13 chr14 90528883 - TDP1 chr14 90509414 + Exonic hg19 LGG TCGA-DH-A66D-01A 7 1 In-Frame Intra-chr q32.11 q32.11 65050 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNK5-KIF6 KCNK5 chr6 39196702 - KIF6 chr6 39398937 - Exonic hg19 LUSC TCGA-60-2720-01A 15 13 Out-of-frame Intra-chr p21.2 p21.2 Seq+ 65051 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNK5-PDE4DIP KCNK5 chr6 39196702 - PDE4DIP chr1 144994701 - Exonic hg19 LUAD TCGA-91-A4BC-01A 8 7 In-Frame Inter-chr p21.2 q21.2 Oncogene Seq+ 65052 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNK5-RUNX2 KCNK5 chr6 39161945 - RUNX2 chr6 45479983 + Exonic hg19 KIRP TCGA-B9-A69E-01A 2 2 In-Frame Intra-chr p21.2 p21.1 Tumor suppressor gene Transcription factor Seq+ 65053 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNMA1-DLG5 KCNMA1 chr10 79397023 - DLG5 chr10 79584234 - Exonic hg19 OV TCGA-24-1553-01A 9 12 In-Frame Intra-chr q22.3 q22.3 Seq+ 65054 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNMA1-DLG5 KCNMA1 chr10 79163620 - DLG5 chr10 79552301 - Exonic hg19 BRCA TCGA-C8-A135-01A 2 5 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 65055 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNMA1-DOCK1 KCNMA1 chr10 78880731 - DOCK1 chr10 129249596 + Exonic hg19 LIHC TCGA-CC-A7IJ-01A 7 3 Out-of-frame Intra-chr q22.3 q26.2 Seq+ 65056 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNMA1-ECD KCNMA1 chr10 78943179 - ECD chr10 74923708 - Exonic hg19 BRCA TCGA-EW-A1OV-01A 10 2 CDS-5'UTR Intra-chr q22.3 q22.2 Seq+ 65057 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNMA1-FARP1 KCNMA1 chr10 79397023 - FARP1 chr13 98865474 + Exonic hg19 PRAD TCGA-HC-7209-01A 34 29 CDS-5'UTR Inter-chr q22.3 q32.2 Seq+ 65058 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNMA1-HIVEP3 KCNMA1 chr10 78943179 - HIVEP3 chr1 41984159 - Exonic hg19 PCPG TCGA-RW-A688-01A 7 4 In-Frame Inter-chr q22.3 p34.2 Tumor suppressor gene Transcription factor 65059 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNMA1-MSMB KCNMA1 chr10 78869931 - MSMB chr10 51555731 + Exonic hg19 BRCA TCGA-A2-A25D-01A 3 4 In-Frame Intra-chr q22.3 q11.22 Tumor suppressor gene Seq+ 65060 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNMA1-RFX2 KCNMA1 chr10 79397023 - RFX2 chr19 6047515 - Exonic hg19 BRCA TCGA-E2-A106-01A 4 2 CDS-5'UTR Inter-chr q22.3 p13.3 Transcription factor Seq+ 65061 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNMB4-ALDH3B2 KCNMB4 chr12 70760850 - ALDH3B2 chr11 67435106 - Exonic hg19 LUAD TCGA-91-6840-01A 4 1 CDS-5'UTR Inter-chr q15 q13.2 Seq+ 65062 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNMB4-GDF3 KCNMB4 chr12 70794116 - GDF3 chr12 7843300 - Exonic hg19 SARC TCGA-DX-A1KZ-01A 11 2 Out-of-frame Intra-chr q15 p13.31 Seq+ 65063 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNMB4-GLIPR1L2 KCNMB4 chr12 70760850 - GLIPR1L2 chr12 75816684 + Exonic hg19 SARC TCGA-PC-A5DN-01A 145 72 Out-of-frame Intra-chr q15 q21.2 Seq+ 65064 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNMB4-RTKN2 KCNMB4 chr12 70760850 - RTKN2 chr10 63996022 - Exonic hg19 PRAD TCGA-J4-A83I-01A 16 9 Out-of-frame Inter-chr q15 q21.2 Seq+ 65065 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNN1-GATA6 KCNN1 chr19 18085996 - GATA6 chr18 19780619 + Exonic hg19 UCEC TCGA-AJ-A2QM-01A 22 13 In-Frame Inter-chr p13.11 q11.2 Transcription factor Seq+ 65066 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNN1-SLC27A1 KCNN1 chr19 18100652 - SLC27A1 chr19 17597372 + Exonic hg19 OV TCGA-25-1329-01A 5 1 In-Frame Intra-chr p13.11 p13.11 Seq+ 65067 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNN3-DCST2 KCNN3 chr1 154794565 - DCST2 chr1 154999191 - Exonic hg19 BRCA TCGA-A2-A0CW-01A 8 9 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 65068 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNN3-YEATS4 KCNN3 chr1 154705479 - YEATS4 chr12 69756568 + Exonic hg19 SARC TCGA-FX-A2QS-01A 96 46 In-Frame Inter-chr q21.3 q15 Seq+ 65069 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNQ1-B4GALNT4 KCNQ1 chr11 2610084 - B4GALNT4 chr11 372662 + Exonic hg19 UCS TCGA-N8-A56S-01A 4 2 Out-of-frame Intra-chr p15.5 p15.5 Seq+ 65070 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNQ1-GALNTL6 KCNQ1 chr11 2799267 - GALNTL6 chr4 173930329 + Exonic hg19 COAD TCGA-D5-5538-01A 29 18 In-Frame Inter-chr p15.5 q34.1 Seq+ 65071 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNQ1-LSP1 KCNQ1 chr11 2466714 - LSP1 chr11 1901317 + Exonic hg19 UCS TCGA-NF-A4WX-01A 10 11 In-Frame Intra-chr p15.5 p15.5 Seq+ 65072 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNQ1-MMP26 KCNQ1 chr11 2610084 - MMP26 chr11 4788500 + Exonic hg19 READ TCGA-DC-6160-01A 3 1 Out-of-frame Intra-chr p15.5 p15.4 Seq+ 65073 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNQ1-SCT KCNQ1 chr11 2549248 - SCT chr11 626530 - Exonic hg19 COAD TCGA-DM-A0XF-01A 182 175 Out-of-frame Intra-chr p15.5 Seq+ 65074 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNQ1-TSPAN32 KCNQ1 chr11 2549248 - TSPAN32 chr11 2324074 + Exonic hg19 BRCA TCGA-D8-A1JG-01B 16 6 In-Frame Intra-chr p15.5 p15.5 Tumor suppressor gene Seq+ 65075 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNQ3-LRRC6 KCNQ3 chr8 133492394 - LRRC6 chr8 133596026 - Exonic hg19 LUSC TCGA-63-A5MB-01A 4 1 Out-of-frame Intra-chr q24.22 q24.22 Seq+ 65076 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNQ3-ZHX2 KCNQ3 chr8 133492394 - ZHX2 chr8 123963532 + Exonic hg19 THYM TCGA-ZB-A96L-01A 2 1 CDS-5'UTR Intra-chr q24.22 q24.13 Tumor suppressor gene Transcription factor 65077 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNQ5-ALK KCNQ5 chr6 73332315 - ALK chr2 29498362 - Exonic hg19 SKCM TCGA-EB-A6QY-01A 7 3 In-Frame Inter-chr q13 p23.1 TK:ALK Oncogene Seq+ 65078 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNQ5-AMPH KCNQ5 chr6 73815090 - AMPH chr7 38433814 - Exonic hg19 LUSC TCGA-85-8354-01A 29 15 In-Frame Inter-chr q13 p14.1 Seq+ 65079 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNQ5-CRYL1 KCNQ5 chr6 73751785 - CRYL1 chr13 21006435 - Exonic hg19 BLCA TCGA-DK-AA6T-01A 5 3 Out-of-frame Inter-chr q13 q12.11 Seq+ 65080 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCNQ5-DST KCNQ5 chr6 73332315 - DST chr6 56342286 - Exonic hg19 LUSC TCGA-60-2722-01A 4 2 Out-of-frame Intra-chr q13 p12.1 Oncogene Seq+ 65081 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCTD10-GLTP KCTD10 chr12 109895797 - GLTP chr12 110296546 - Exonic hg19 STAD TCGA-BR-8060-01A 6 6 Out-of-frame Intra-chr q24.11 q24.11 65082 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCTD10-TPCN1 KCTD10 chr12 109907320 - TPCN1 chr12 113716577 + Exonic hg19 LUAD TCGA-91-6848-01A 4 2 Out-of-frame Intra-chr q24.11 q24.13 Seq+ 65083 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCTD15-MSI2 KCTD15 chr19 34302457 - MSI2 chr17 55693331 + Exonic hg19 SKCM TCGA-FW-A3I3-06A 8 2 In-Frame Inter-chr q13.11 q22 Seq+ 65084 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCTD18-SNED1 KCTD18 chr2 201362476 - SNED1 chr2 242007179 + Exonic hg19 LUAD TCGA-75-6207-01A 5 4 In-Frame Intra-chr q33.1 q37.3 Seq+ 65085 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCTD2-ARHGAP23 KCTD2 chr17 73055700 - ARHGAP23 chr17 36614346 + Exonic hg19 UCEC TCGA-KJ-A3U4-01A 4 5 In-Frame Intra-chr q25.1 q12 Seq+ 65086 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCTD2-TMEM104 KCTD2 chr17 73045423 - TMEM104 chr17 72835026 + Exonic hg19 LUAD TCGA-55-6969-01A 5 1 Out-of-frame Intra-chr q25.1 q25.1 65087 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCTD20-BRPF3 KCTD20 chr6 36410888 - BRPF3 chr6 36168074 + Exonic hg19 STAD TCGA-VQ-A91N-01A 4 4 5'UTR-5'UTR Intra-chr p21.31 p21.31 Seq+ 65088 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCTD20-ETV7 KCTD20 chr6 36410888 - ETV7 chr6 36322464 - Exonic hg19 BLCA TCGA-DK-A3WY-01A 5 1 5'UTR-CDS Intra-chr p21.31 p21.31 Transcription factor Seq+ 65089 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCTD20-JARID2 KCTD20 chr6 36438034 - JARID2 chr6 15374348 + Exonic hg19 BRCA TCGA-D8-A27H-01A 3 4 Out-of-frame Intra-chr p21.31 p22.3 Seq+ 65090 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCTD20-STK38 KCTD20 chr6 36438034 - STK38 chr6 36493419 - Exonic hg19 PRAD TCGA-V1-A8MG-01A 6 6 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 65091 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCTD20-ZNF311 KCTD20 chr6 36438034 - ZNF311 chr6 28971991 - Exonic hg19 PAAD TCGA-XN-A8T5-01A 2 2 CDS-5'UTR Intra-chr p21.31 p22.1 Transcription factor Seq+ 65092 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCTD5-TSC2 KCTD5 chr16 2747998 - TSC2 chr16 2136194 + Exonic hg19 ACC TCGA-OR-A5J1-01A 42 40 In-Frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Seq+ 65093 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCTD7-KLK3 KCTD7 chr7 66104215 - KLK3 chr19 51358171 + Exonic hg19 PRAD TCGA-KK-A8ID-01A 2 1 CDS-5'UTR Inter-chr q11.21 q13.33 65094 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KCTD8-WDR19 KCTD8 chr4 44449580 - WDR19 chr4 39267683 + Exonic hg19 SARC TCGA-DX-AB2O-01A 2 4 Out-of-frame Intra-chr p13 p14 Seq+ 65095 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM1A-EPHB2 KDM1A chr1 23357127 - EPHB2 chr1 23208852 + Exonic hg19 STAD TCGA-BR-4357-01A 44 47 In-Frame Intra-chr p36.12 p36.12 Tumor suppressor gene Seq+ 65096 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM1A-TMEM115 KDM1A chr1 23346440 - TMEM115 chr3 50392978 - Exonic hg19 STAD TCGA-VQ-A8DV-01A 5 26 Out-of-frame Inter-chr p36.12 p21.31 Seq+ 65097 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2A-C11orf80 KDM2A chr11 66888829 - C11orf80 chr11 66605841 + Exonic hg19 LUSC TCGA-43-2578-01A 11 9 Out-of-frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 65098 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2A-C11orf80 KDM2A chr11 66949363 - C11orf80 chr11 66526514 + Exonic hg19 LIHC TCGA-BC-A112-01A 17 4 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 65099 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2A-C11orf80 KDM2A chr11 66888829 - C11orf80 chr11 66555631 + Exonic hg19 PRAD TCGA-EJ-A46G-01A 166 153 Out-of-frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 65100 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2A-DDR2 KDM2A chr11 67007840 - DDR2 chr1 162749902 + Exonic hg19 LUAD TCGA-86-8054-01A 14 19 In-Frame Inter-chr q13.2 Transcription factor q23.3 TK:DDR Oncogene Tumor suppressor gene Seq+ 65101 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2A-FBXO3 KDM2A chr11 66949363 - FBXO3 chr11 33792376 - Exonic hg19 BRCA TCGA-A2-A0D2-01A 2 2 Out-of-frame Intra-chr q13.2 Transcription factor p13 Seq+ 65102 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2A-GRIP1 KDM2A chr11 66888829 - GRIP1 chr12 66990707 - Exonic hg19 BRCA TCGA-AO-A0J6-01A 2 1 Out-of-frame Inter-chr q13.2 Transcription factor q14.3 65103 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2A-MAP3K3 KDM2A chr11 66999431 - MAP3K3 chr17 61759126 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 367 176 Out-of-frame Inter-chr q13.2 Transcription factor q23.3 STE:STE11 Seq+ 65104 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2A-PACS1 KDM2A chr11 66888829 - PACS1 chr11 65960957 + Exonic hg19 LUAD TCGA-99-8025-01A 6 13 Out-of-frame Intra-chr q13.2 Transcription factor q13.1 Seq+ 65105 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2A-PACS1 KDM2A chr11 66888829 - PACS1 chr11 66010383 + Exonic hg19 KIRC TCGA-B0-5713-01A 5 6 Out-of-frame Intra-chr q13.2 Transcription factor q13.1 Seq+ 65106 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2A-PPP6R3 KDM2A chr11 66888829 - PPP6R3 chr11 68363565 + Exonic hg19 BRCA TCGA-AO-A0J3-01A 61 60 Out-of-frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 65107 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2A-RBM14 KDM2A chr11 66888829 - RBM14 chr11 66391685 + Exonic hg19 CHOL TCGA-W5-AA2X-01A 4 9 Out-of-frame Intra-chr q13.2 Transcription factor q13.2 Tumor suppressor gene Seq+ 65108 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2A-RHOD KDM2A chr11 66888829 - RHOD chr11 66833367 + Exonic hg19 LUSC TCGA-33-6737-01A 249 198 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 65109 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2A-RHOD KDM2A chr11 66888829 - RHOD chr11 66833367 + Exonic hg19 LUAD TCGA-44-4112-01A 3 3 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 65110 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2A-RHOD KDM2A chr11 66888829 - RHOD chr11 66833367 + Exonic hg19 UCEC TCGA-AP-A5FX-01A 44 36 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 65111 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2A-RHOD KDM2A chr11 67018269 - RHOD chr11 66833367 + Exonic hg19 BRCA TCGA-B6-A0IG-01A 86 44 Out-of-frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 65112 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2A-RHOD KDM2A chr11 66999431 - RHOD chr11 66837896 + Exonic hg19 LIHC TCGA-DD-AADF-01A 52 29 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 65113 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2A-RHOD KDM2A chr11 66888829 - RHOD chr11 66833367 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 19 26 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 65114 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2A-SLC5A4 KDM2A chr11 66947688 - SLC5A4 chr22 32650200 - Exonic hg19 SARC TCGA-SI-A71O-01A 3 3 Out-of-frame Inter-chr q13.2 Transcription factor q12.3 Seq+ 65115 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2A-SYT12 KDM2A chr11 66999431 - SYT12 chr11 66812064 + Exonic hg19 GBM TCGA-02-2486-01A 3 7 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 65116 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2A-SYT12 KDM2A chr11 66888829 - SYT12 chr11 66777350 + Exonic hg19 BRCA TCGA-BH-A18R-01A 4 4 Out-of-frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 65117 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2A-SYT12 KDM2A chr11 66888829 - SYT12 chr11 66797593 + Exonic hg19 STAD TCGA-BR-8289-01A 21 103 5'UTR-5'UTR Intra-chr q13.2 Transcription factor q13.2 Seq+ 65118 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2B-CORO1C KDM2B chr12 121877660 - CORO1C chr12 109095099 - Exonic hg19 SARC TCGA-IS-A3K7-01A 4 3 CDS-5'UTR Intra-chr q24.31 Transcription factor q24.11 Seq+ 65119 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2B-KSR2 KDM2B chr12 121986782 - KSR2 chr12 118298236 - Exonic hg19 GBM TCGA-06-5856-01A 7 32 Out-of-frame Intra-chr q24.31 Transcription factor q24.23 TKL:RAF Seq+ 65120 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2B-LRRIQ1 KDM2B chr12 122012452 - LRRIQ1 chr12 85638567 + Exonic hg19 SARC TCGA-DX-A3LS-01A 18 29 Out-of-frame Intra-chr q24.31 Transcription factor q21.31 Seq+ 65121 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2B-ORAI1 KDM2B chr12 122012452 - ORAI1 chr12 122078947 + Exonic hg19 TGCT TCGA-2G-AAL5-01A 4 3 Out-of-frame Intra-chr q24.31 Transcription factor q24.31 Seq+ 65122 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2B-RHOF KDM2B chr12 121932382 - RHOF chr12 122231145 - Exonic hg19 UCEC TCGA-A5-A7WK-01A 36 27 In-Frame Intra-chr q24.31 Transcription factor q24.31 Seq+ 65123 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM2B-SLC9A5 KDM2B chr12 122012452 - SLC9A5 chr16 67304641 + Exonic hg19 PRAD TCGA-HC-8266-01A 7 7 In-Frame Inter-chr q24.31 Transcription factor q22.1 Seq+ 65124 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM3A-CRIM1 KDM3A chr2 86691339 - CRIM1 chr2 36691677 + Exonic hg19 KIRP TCGA-G7-6792-01A 43 23 In-Frame Intra-chr p11.2 Tumor suppressor gene p22.2 Seq+ 65125 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM3A-MRPL35 KDM3A chr2 86669356 - MRPL35 chr2 86433229 + Exonic hg19 LUAD TCGA-44-4112-01A 5 2 Out-of-frame Intra-chr p11.2 Tumor suppressor gene p11.2 65126 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM3A-PUS10 KDM3A chr2 86718398 - PUS10 chr2 61239040 - Exonic hg19 LUSC TCGA-60-2715-01A 6 3 CDS-5'UTR Intra-chr p11.2 Tumor suppressor gene p15 Seq+ 65127 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM3A-RFX8 KDM3A chr2 86694006 - RFX8 chr2 102083362 - Exonic hg19 BRCA TCGA-BH-A0B3-01A 3 2 CDS-5'UTR Intra-chr p11.2 Tumor suppressor gene q11.2 Transcription factor Seq+ 65128 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4A-AL139289.1 KDM4A chr1 44134970 - AL139289.1 chr1 43870051 + Exonic hg19 LIHC TCGA-2Y-A9H9-01A 2 1 Out-of-frame Intra-chr p34.2 p34.2 65129 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4A-CREB3L4 KDM4A chr1 44133690 - CREB3L4 chr1 153945220 + Exonic hg19 BRCA TCGA-BH-A18J-01A 28 26 Out-of-frame Intra-chr p34.2 q21.3 Transcription factor Seq+ 65130 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4A-FAF1 KDM4A chr1 44163684 - FAF1 chr1 50957473 - Exonic hg19 SARC TCGA-DX-AATS-01A 2 4 In-Frame Intra-chr p34.2 p32.3 Seq+ 65131 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4A-HYI KDM4A chr1 44149475 - HYI chr1 43917990 - Exonic hg19 BRCA TCGA-D8-A1XZ-01A 11 4 Out-of-frame Intra-chr p34.2 p34.2 Seq+ 65132 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4A-MPL KDM4A chr1 44169783 - MPL chr1 43805635 + Exonic hg19 ESCA TCGA-2H-A9GJ-01A 2 51 In-Frame Intra-chr p34.2 p34.2 Oncogene Seq+ 65133 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4A-PTCH2 KDM4A chr1 44137546 - PTCH2 chr1 45286376 - Exonic hg19 LUSC TCGA-98-8022-01A 19 11 Out-of-frame Intra-chr p34.2 p34.1 Tumor suppressor gene Seq+ 65134 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4A-PTPRF KDM4A chr1 44115923 - PTPRF chr1 44083116 + Exonic hg19 BRCA TCGA-A2-A04P-01A 2 1 5'UTR-CDS Intra-chr p34.2 p34.2 65135 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4A-PTPRF KDM4A chr1 44115923 - PTPRF chr1 44086509 + Exonic hg19 BLCA TCGA-ZF-A9RD-01A 5 2 5'UTR-CDS Intra-chr p34.2 p34.2 65136 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4A-RYBP KDM4A chr1 44149475 - RYBP chr3 72428578 - Exonic hg19 LUAD TCGA-78-7153-01A 2 2 Out-of-frame Inter-chr p34.2 Seq+ 65137 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4B-AC011498.1 KDM4B chr19 5077481 - AC011498.1 chr19 4493700 + Exonic hg19 PRAD TCGA-HC-8265-01A 9 2 Out-of-frame Intra-chr p13.3 p13.3 65138 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4B-AKAP8L KDM4B chr19 5144913 - AKAP8L chr19 15491423 - Exonic hg19 LUAD TCGA-49-4486-01A 95 51 In-Frame Intra-chr p13.3 p13.12 Transcription factor Seq+ 65139 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4B-ASTN2 KDM4B chr19 4969241 - ASTN2 chr9 119382722 - Exonic hg19 PRAD TCGA-G9-A9S7-01A 2 24 5'UTR-CDS Inter-chr p13.3 q33.1 Seq+ 65140 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4B-C19orf44 KDM4B chr19 5016350 - C19orf44 chr19 16611603 + Exonic hg19 BRCA TCGA-A7-A13E-01A 31 8 5'UTR-5'UTR Intra-chr p13.3 p13.11 Seq+ 65141 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4B-CHAF1A KDM4B chr19 5082515 - CHAF1A chr19 4418017 + Exonic hg19 LGG TCGA-DU-8163-01A 12 4 In-Frame Intra-chr p13.3 p13.3 Seq+ 65142 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4B-DKKL1 KDM4B chr19 5047680 - DKKL1 chr19 49877974 + Exonic hg19 LIHC TCGA-KR-A7K8-01A 90 74 Out-of-frame Intra-chr p13.3 q13.33 Seq+ 65143 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4B-FOXA3 KDM4B chr19 5144913 - FOXA3 chr19 46375333 + Exonic hg19 SKCM TCGA-D3-A2JE-06A 4 2 In-Frame Intra-chr p13.3 q13.32 Transcription factor 65144 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4B-MPND KDM4B chr19 5082515 - MPND chr19 4345742 + Exonic hg19 OV TCGA-10-0926-01A 6 5 In-Frame Intra-chr p13.3 p13.3 Seq+ 65145 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4B-PHYHIPL KDM4B chr19 5082515 - PHYHIPL chr10 61004817 + Exonic hg19 PCPG TCGA-WB-A80M-01A 104 70 Out-of-frame Inter-chr p13.3 q21.1 Seq+ 65146 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4B-SBNO2 KDM4B chr19 5082515 - SBNO2 chr19 1127764 - Exonic hg19 LGG TCGA-WY-A85E-01A 5 2 In-Frame Intra-chr p13.3 p13.3 65147 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4B-SLC25A42 KDM4B chr19 5138081 - SLC25A42 chr19 19206900 + Exonic hg19 SKCM TCGA-EB-A44O-01A 6 1 CDS-5'UTR Intra-chr p13.3 p13.11 Seq+ 65148 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4B-UHRF1 KDM4B chr19 4969241 - UHRF1 chr19 4941540 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 5 10 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 65149 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4B-UHRF1 KDM4B chr19 5144913 - UHRF1 chr19 4929234 + Exonic hg19 BRCA TCGA-BH-A0H7-01A 14 5 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 65150 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4B-UVRAG KDM4B chr19 5016350 - UVRAG chr11 75851755 + Exonic hg19 UCS TCGA-N9-A4Q1-01A 9 4 5'UTR-CDS Inter-chr p13.3 q13.5 Tumor suppressor gene Seq+ 65151 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4C-ARMC2 KDM4C chr9 6893232 - ARMC2 chr6 109220897 + Exonic hg19 BRCA TCGA-EW-A6S9-01A 12 11 Out-of-frame Inter-chr p24.1 q21 Seq+ 65152 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4C-DMRT3 KDM4C chr9 6814745 - DMRT3 chr9 990041 + Exonic hg19 CESC TCGA-EK-A2IR-01A 14 12 Out-of-frame Intra-chr p24.1 p24.3 Transcription factor Seq+ 65153 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4C-INSL4 KDM4C chr9 6814745 - INSL4 chr9 5233654 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 15 6 Out-of-frame Intra-chr p24.1 p24.1 Seq+ 65154 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4C-JAK2 KDM4C chr9 7103870 - JAK2 chr9 5123004 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 2 3 Out-of-frame Intra-chr p24.1 p24.1 TK:JakA Oncogene 65155 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4C-KIAA1045 KDM4C chr9 6893232 - KIAA1045 chr9 34976149 + Exonic hg19 LGG TCGA-S9-A7R1-01A 5 3 In-Frame Intra-chr p24.1 Seq+ 65156 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4C-KLK7 KDM4C chr9 7049200 - KLK7 chr19 51480947 - Exonic hg19 LUAD TCGA-44-A4SU-01A 2 2 In-Frame Inter-chr p24.1 q13.41 Seq+ 65157 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4C-PTPRD KDM4C chr9 6990524 - PTPRD chr9 10341017 - Exonic hg19 PRAD TCGA-KK-A7AQ-01A 2 1 CDS-5'UTR Intra-chr p24.1 Oncogene Tumor suppressor gene Seq+ 65158 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM4C-RFX3 KDM4C chr9 6805774 - RFX3 chr9 3225280 - Exonic hg19 KIRC TCGA-B0-4696-01A 4 2 Out-of-frame Intra-chr p24.1 p24.2 Transcription factor Seq+ 65159 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM5A-ANO2 KDM5A chr12 427272 - ANO2 chr12 5708795 - Exonic hg19 BRCA TCGA-A1-A0SK-01A 227 134 In-Frame Intra-chr p13.33 Tumor suppressor gene p13.31 Seq+ 65160 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM5A-IQSEC3 KDM5A chr12 442653 - IQSEC3 chr12 266191 + Exonic hg19 SKCM TCGA-D3-A1Q9-06A 29 12 Out-of-frame Intra-chr p13.33 Tumor suppressor gene Seq+ 65161 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM5A-NINJ2 KDM5A chr12 404739 - NINJ2 chr12 675344 - Exonic hg19 BRCA TCGA-AO-A124-01A 30 28 In-Frame Intra-chr p13.33 Tumor suppressor gene p13.33 Seq+ 65162 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM5A-NINJ2 KDM5A chr12 404739 - NINJ2 chr12 675344 - Exonic hg19 STAD TCGA-BR-8295-01A 10 115 In-Frame Intra-chr p13.33 Tumor suppressor gene p13.33 Seq+ 65163 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM5A-NINJ2 KDM5A chr12 430161 - NINJ2 chr12 675344 - Exonic hg19 ESCA TCGA-L5-A8NI-01A 4 63 In-Frame Intra-chr p13.33 Tumor suppressor gene p13.33 Seq+ 65164 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM5A-RAE1 KDM5A chr12 459787 - RAE1 chr20 55940412 + Exonic hg19 LUAD TCGA-44-A47B-01A 52 43 In-Frame Inter-chr p13.33 Tumor suppressor gene q13.31 Seq+ 65165 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM5B-ITPKB KDM5B chr1 202742246 - ITPKB chr1 226836472 - Exonic hg19 PCPG TCGA-WB-A81J-01A 27 11 In-Frame Intra-chr q32.1 Transcription factor q42.12 Seq+ 65166 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM5B-PPP1R12B KDM5B chr1 202742246 - PPP1R12B chr1 202536906 + Exonic hg19 SARC TCGA-DX-A8BV-01A 10 6 In-Frame Intra-chr q32.1 Transcription factor q32.1 Seq+ 65167 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM5B-PPP1R12B KDM5B chr1 202743741 - PPP1R12B chr1 202385915 + Exonic hg19 LGG TCGA-FG-5965-02B 9 4 In-Frame Intra-chr q32.1 Transcription factor q32.1 Seq+ 65168 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM5B-RABGAP1L KDM5B chr1 202742246 - RABGAP1L chr1 174340117 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 8 11 Out-of-frame Intra-chr q32.1 Transcription factor q25.1 Seq+ 65169 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM5B-RASAL2 KDM5B chr1 202777230 - RASAL2 chr1 178389646 + Exonic hg19 SKCM TCGA-EE-A3J5-06A 4 1 In-Frame Intra-chr q32.1 Transcription factor q25.2 Tumor suppressor gene Seq+ 65170 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM5B-UAP1 KDM5B chr1 202777230 - UAP1 chr1 162535802 + Exonic hg19 LGG TCGA-DU-6542-01A 7 6 CDS-5'UTR Intra-chr q32.1 Transcription factor q23.3 Seq+ 65171 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM5C-HUWE1 KDM5C chrX 53245256 - HUWE1 chrX 53707139 - Exonic hg19 HNSC TCGA-KU-A66T-01A 144 75 CDS-5'UTR Intra-chr p11.22 Oncogene p11.22 Seq+ 65172 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM5C-MAGT1 KDM5C chrX 53222619 - MAGT1 chrX 77086392 - Exonic hg19 LGG TCGA-VV-A86M-01A 3 2 Out-of-frame Intra-chr p11.22 Oncogene q21.1 Seq+ 65173 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM5C-PPP4R1 KDM5C chrX 53240679 - PPP4R1 chr18 9550396 - Exonic hg19 LUAD TCGA-05-4398-01A 6 3 Out-of-frame Inter-chr p11.22 Oncogene p11.22 65174 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM6A-ARHGAP6 KDM6A chrX 44918711 - ARHGAP6 chrX 11272827 - Exonic hg19 PRAD TCGA-EJ-8469-01A 53 32 In-Frame Intra-chr p11.3 Oncogene Tumor suppressor gene p22.2 Seq+ 65175 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM6A-DCAF7 KDM6A chrX 44733233 - DCAF7 chr17 61655831 + Exonic hg19 LUAD TCGA-71-6725-01A 14 11 In-Frame Inter-chr p11.3 Oncogene Tumor suppressor gene q23.3 Seq+ 65176 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM6A-DLL1 KDM6A chrX 44833960 - DLL1 chr6 170595386 - Exonic hg19 HNSC TCGA-BA-A8YP-01A 7 6 Out-of-frame Inter-chr p11.3 Oncogene Tumor suppressor gene Seq+ 65177 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM6A-DMD KDM6A chrX 44833960 - DMD chrX 31497220 - Exonic hg19 LUAD TCGA-49-AARO-01A 4 3 In-Frame Intra-chr p11.3 Oncogene Tumor suppressor gene p21.1 Tumor suppressor gene Seq+ 65178 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM6A-FUNDC1 KDM6A chrX 44833960 - FUNDC1 chrX 44401347 - Exonic hg19 ACC TCGA-OR-A5KV-01A 263 143 Out-of-frame Intra-chr p11.3 Oncogene Tumor suppressor gene p11.3 Seq+ 65179 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM6A-KAL1 KDM6A chrX 44945224 - KAL1 chrX 8591711 - Exonic hg19 BLCA TCGA-BT-A20Q-01A 4 6 Out-of-frame Intra-chr p11.3 Oncogene Tumor suppressor gene Seq+ 65180 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM6A-METTL20 KDM6A chrX 44733233 - METTL20 chr12 31814775 + Exonic hg19 LUAD TCGA-86-7954-01A 67 81 CDS-5'UTR Inter-chr p11.3 Oncogene Tumor suppressor gene Seq+ 65181 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM6A-PDHX KDM6A chrX 44950109 - PDHX chr11 34952951 + Exonic hg19 BRCA TCGA-BH-A0BF-01A 4 7 Out-of-frame Inter-chr p11.3 Oncogene Tumor suppressor gene p13 Seq+ 65182 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM6A-RPS6KA3 KDM6A chrX 44950109 - RPS6KA3 chrX 20252932 - Exonic hg19 SARC TCGA-DX-A3UC-01A 9 3 Out-of-frame Intra-chr p11.3 Oncogene Tumor suppressor gene p22.12 65183 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM6A-ZNF674 KDM6A chrX 44733233 - ZNF674 chrX 46360770 - Exonic hg19 LUAD TCGA-71-6725-01A 10 8 Out-of-frame Intra-chr p11.3 Oncogene Tumor suppressor gene p11.3 Transcription factor Seq+ 65184 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM6B-DNAH2 KDM6B chr17 7743342 - DNAH2 chr17 7704896 + Exonic hg19 LUAD TCGA-67-3770-01A 5 1 5'UTR-CDS Intra-chr p13.1 p13.1 65185 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KDM6B-TMEM95 KDM6B chr17 7755383 - TMEM95 chr17 7259711 + Exonic hg19 BRCA TCGA-A7-A13D-01A 34 6 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 65186 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KHDC1-NLK KHDC1 chr6 74001721 - NLK chr17 26449629 + Exonic hg19 BRCA TCGA-A1-A0SO-01A 2 3 In-Frame Inter-chr q13 q11.2 CMGC:MAPK Seq+ 65187 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KHDC1-OOEP KHDC1 chr6 74001721 - OOEP chr6 74079108 - Exonic hg19 BRCA TCGA-OL-A66P-01A 4 3 Out-of-frame Intra-chr q13 q13 Seq+ 65188 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KHDC1-SLC17A5 KHDC1 chr6 74001721 - SLC17A5 chr6 74325170 - Exonic hg19 ESCA TCGA-L5-A8NE-01A 5 16 Out-of-frame Intra-chr q13 q13 Seq+ 65189 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KHDRBS1-TMEM48 KHDRBS1 chr1 32479978 - TMEM48 chr1 54238162 - Exonic hg19 UCS TCGA-N5-A59E-01A 15 7 Out-of-frame Intra-chr p35.2 65190 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KHDRBS2-LMBRD1 KHDRBS2 chr6 62995763 - LMBRD1 chr6 70386433 - Exonic hg19 LUAD TCGA-55-6978-01A 7 4 In-Frame Intra-chr q11.1 q13 Seq+ 65191 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KHDRBS3-ADI1 KHDRBS3 chr8 136594316 - ADI1 chr2 3504764 - Exonic hg19 BRCA TCGA-GI-A2C9-01A 61 31 In-Frame Inter-chr q24.23 Seq+ 65192 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KHDRBS3-ANXA13 KHDRBS3 chr8 136470197 - ANXA13 chr8 124714976 - Exonic hg19 SKCM TCGA-EE-A2MR-06A 3 2 In-Frame Intra-chr q24.23 q24.13 Seq+ 65193 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KHDRBS3-PACRG KHDRBS3 chr8 136555013 - PACRG chr6 163483182 + Exonic hg19 SKCM TCGA-ER-A2ND-06A 16 5 In-Frame Inter-chr q24.23 q26 Tumor suppressor gene Seq+ 65194 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KHSRP-CD70 KHSRP chr19 6418494 - CD70 chr19 6590147 - Exonic hg19 BRCA TCGA-AO-A03N-01B 3 3 CDS-5'UTR Intra-chr p13.3 p13.3 65195 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0020-CEP152 KIAA0020 chr9 2804164 - CEP152 chr15 49057864 - Exonic hg19 LUSC TCGA-77-7141-01A 2 1 Out-of-frame Inter-chr q21.1 65196 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0100-ALKBH5 KIAA0100 chr17 26970628 - ALKBH5 chr17 18110129 + Exonic hg19 LUSC TCGA-60-2722-01A 136 76 In-Frame Intra-chr q11.2 p11.2 Seq+ 65197 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0100-CRHR1 KIAA0100 chr17 26970628 - CRHR1 chr17 43884376 + Exonic hg19 CESC TCGA-VS-A8EJ-01A 6 8 Out-of-frame Intra-chr q11.2 q21.31 Seq+ 65198 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0100-SEZ6 KIAA0100 chr17 26945809 - SEZ6 chr17 27296970 - Exonic hg19 LUSC TCGA-66-2758-01A 18 16 In-Frame Intra-chr q11.2 q11.2 Seq+ 65199 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0100-TEX14 KIAA0100 chr17 26965270 - TEX14 chr17 56692706 - Exonic hg19 BRCA TCGA-A7-A2KD-01A 13 4 Out-of-frame Intra-chr q11.2 q22 Seq+ 65200 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0101-TRIP4 KIAA0101 chr15 64673157 - TRIP4 chr15 64698529 + Exonic hg19 BRCA TCGA-BH-A1FU-01A 4 5 In-Frame Intra-chr q22.31 Seq+ 65201 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0146-ANK1 KIAA0146 chr8 48614577 - ANK1 chr8 41615655 - Exonic hg19 COAD TCGA-CM-6172-01A 41 12 In-Frame Intra-chr p11.21 Seq+ 65202 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0146-CNBD1 KIAA0146 chr8 48353104 - CNBD1 chr8 88440774 + Exonic hg19 COAD TCGA-AZ-4614-01A 3 3 Out-of-frame Intra-chr q21.3 65203 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0146-COX6B1 KIAA0146 chr8 48613052 - COX6B1 chr19 36149496 + Exonic hg19 LGG TCGA-FG-5965-02A 42 17 In-Frame Inter-chr q13.12 65204 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0146-CSMD3 KIAA0146 chr8 48511758 - CSMD3 chr8 113569183 - Exonic hg19 DLBC TCGA-GS-A9TQ-01A 6 6 Out-of-frame Intra-chr q23.3 Oncogene 65205 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0146-LAPTM4B KIAA0146 chr8 48511758 - LAPTM4B chr8 98863625 + Exonic hg19 COAD TCGA-AA-3662-01A 31 23 Out-of-frame Intra-chr q22.1 Seq+ 65206 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0146-PIAS1 KIAA0146 chr8 48511758 - PIAS1 chr15 68457069 + Exonic hg19 SKCM TCGA-EE-A180-06A 3 1 Out-of-frame Inter-chr q23 Tumor suppressor gene 65207 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0146-SLA KIAA0146 chr8 48320523 - SLA chr8 134087375 - Exonic hg19 PRAD TCGA-FC-A4JI-01A 38 22 CDS-5'UTR Intra-chr q24.22 Seq+ 65208 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0146-SNX7 KIAA0146 chr8 48626203 - SNX7 chr1 99225610 + Exonic hg19 HNSC TCGA-CR-7390-01A 16 7 Out-of-frame Inter-chr p21.3 65209 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0146-SYNC KIAA0146 chr8 48642027 - SYNC chr1 33149983 - Exonic hg19 BRCA TCGA-A2-A0CY-01A 3 3 In-Frame Inter-chr p35.1 65210 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0146-TG KIAA0146 chr8 48320523 - TG chr8 134042066 + Exonic hg19 PRAD TCGA-EJ-7330-01A 3 4 In-Frame Intra-chr q24.22 65211 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0182-CDH13 KIAA0182 chr16 85647004 - CDH13 chr16 83520082 + Exonic hg19 STAD TCGA-BR-8590-01A 3 36 In-Frame Intra-chr q23.3 Tumor suppressor gene 65212 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0182-COX4NB KIAA0182 chr16 85647004 - COX4NB chr16 85822656 - Exonic hg19 HNSC TCGA-BA-A4II-01A 79 31 Out-of-frame Intra-chr Seq+ 65213 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0182-CRISPLD2 KIAA0182 chr16 85682357 - CRISPLD2 chr16 84888335 + Exonic hg19 LIHC TCGA-2Y-A9H6-01A 6 2 Out-of-frame Intra-chr q24.1 65214 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0182-HSD17B2 KIAA0182 chr16 85667738 - HSD17B2 chr16 82101775 + Exonic hg19 BRCA TCGA-A2-A25A-01A 3 3 In-Frame Intra-chr q23.3 65215 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0182-KIAA0513 KIAA0182 chr16 85682357 - KIAA0513 chr16 85100506 + Exonic hg19 BRCA TCGA-A2-A25B-01A 2 3 CDS-5'UTR Intra-chr q24.1 65216 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0182-METTL23 KIAA0182 chr16 85647004 - METTL23 chr17 74729060 + Exonic hg19 BRCA TCGA-A7-A2KD-01A 196 150 Out-of-frame Inter-chr q25.1 Seq+ 65217 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0182-NOTCH3 KIAA0182 chr16 85647004 - NOTCH3 chr19 15276902 - Exonic hg19 LUAD TCGA-05-4427-01A 30 12 In-Frame Inter-chr p13.12 Oncogene Tumor suppressor gene 65218 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0182-USP10 KIAA0182 chr16 85647004 - USP10 chr16 84792322 + Exonic hg19 LUAD TCGA-80-5611-01A 38 31 In-Frame Intra-chr q24.1 65219 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0195-ICT1 KIAA0195 chr17 73468010 - ICT1 chr17 73013173 + Exonic hg19 BRCA TCGA-AO-A03M-01B 4 4 In-Frame Intra-chr Seq+ 65220 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0195-ICT1 KIAA0195 chr17 73452832 - ICT1 chr17 73013173 + Exonic hg19 BRCA TCGA-JL-A3YW-01A 5 46 5'UTR-CDS Intra-chr Seq+ 65221 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0195-LRRC52 KIAA0195 chr17 73468010 - LRRC52 chr1 165532742 + Exonic hg19 SARC TCGA-3B-A9HI-01A 10 11 Out-of-frame Inter-chr q24.1 65222 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0195-NUP85 KIAA0195 chr17 73468010 - NUP85 chr17 73204622 + Exonic hg19 LUSC TCGA-22-5485-01A 11 3 In-Frame Intra-chr q25.1 Seq+ 65223 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0195-TMEM104 KIAA0195 chr17 73482507 - TMEM104 chr17 72832066 + Exonic hg19 STAD TCGA-FP-8631-01A 2 1 In-Frame Intra-chr q25.1 65224 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0195-TTYH2 KIAA0195 chr17 73452832 - TTYH2 chr17 72227027 + Exonic hg19 OV TCGA-23-1122-01A 14 1 5'UTR-CDS Intra-chr q25.1 Seq+ 65225 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0226L-CUBN KIAA0226L chr13 46961812 - CUBN chr10 16893442 - Exonic hg19 SARC TCGA-SI-AA8B-01A 73 54 5'UTR-5'UTR Inter-chr p13 65226 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0232-INPP4B KIAA0232 chr4 6826411 - INPP4B chr4 142950067 - Exonic hg19 BRCA TCGA-LL-A441-01A 9 3 Out-of-frame Intra-chr p16.1 q31.21 Tumor suppressor gene Seq+ 65227 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0232-LRCH3 KIAA0232 chr4 6826411 - LRCH3 chr3 197541779 + Exonic hg19 STAD TCGA-R5-A7ZE-01B 12 44 Out-of-frame Inter-chr p16.1 q29 Seq+ 65228 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0232-MAN2B2 KIAA0232 chr4 6878484 - MAN2B2 chr4 6610834 + Exonic hg19 OV TCGA-3P-A9WA-01A 3 38 Out-of-frame Intra-chr p16.1 p16.1 Seq+ 65229 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0232-MRFAP1 KIAA0232 chr4 6784568 - MRFAP1 chr4 6642555 + Exonic hg19 STAD TCGA-VQ-A8E0-01A 2 9 Out-of-frame Intra-chr p16.1 p16.1 Seq+ 65230 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0240-CYB5R4 KIAA0240 chr6 42790741 - CYB5R4 chr6 84644314 + Exonic hg19 BRCA TCGA-C8-A1HK-01A 12 7 Out-of-frame Intra-chr q14.2 65231 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0240-HIST1H2AC KIAA0240 chr6 42821476 - HIST1H2AC chr6 26138282 + Exonic hg19 BRCA TCGA-D8-A140-01A 3 2 Out-of-frame Intra-chr p22.2 65232 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0240-MPHOSPH9 KIAA0240 chr6 42749839 - MPHOSPH9 chr12 123682881 - Exonic hg19 GBM TCGA-06-0129-01A 6 685 5'UTR-CDS Inter-chr q24.31 65233 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0240-PMS1 KIAA0240 chr6 42749839 - PMS1 chr2 190728469 + Exonic hg19 KIRP TCGA-Q2-A5QZ-01A 3 16 5'UTR-CDS Inter-chr q32.2 Oncogene 65234 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0240-UBR2 KIAA0240 chr6 42749839 - UBR2 chr6 42571326 + Exonic hg19 BRCA TCGA-AR-A251-01A 2 14 5'UTR-CDS Intra-chr p21.1 65235 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0247-PLEKHD1 KIAA0247 chr14 70078545 - PLEKHD1 chr14 69966832 + Exonic hg19 UCEC TCGA-B5-A1MW-01A 9 3 5'UTR-CDS Intra-chr q24.1 Seq+ 65236 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0247-PLEKHD1 KIAA0247 chr14 70125430 - PLEKHD1 chr14 69966832 + Exonic hg19 UCEC TCGA-EY-A4KR-01A 2 2 Out-of-frame Intra-chr q24.1 Seq+ 65237 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0247-RAD51B KIAA0247 chr14 70078545 - RAD51B chr14 68758601 + Exonic hg19 BRCA TCGA-A8-A06O-01A 4 17 5'UTR-CDS Intra-chr q24.1 Seq+ 65238 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0247-SLC39A9 KIAA0247 chr14 70078545 - SLC39A9 chr14 69928414 + Exonic hg19 UCEC TCGA-B5-A1MW-01A 4 1 5'UTR-CDS Intra-chr q24.1 Seq+ 65239 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0247-SLC39A9 KIAA0247 chr14 70170309 - SLC39A9 chr14 69908786 + Exonic hg19 ESCA TCGA-JY-A6F8-01A 16 77 In-Frame Intra-chr q24.1 Seq+ 65240 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0247-TXNDC16 KIAA0247 chr14 70078545 - TXNDC16 chr14 53011089 - Exonic hg19 LUAD TCGA-55-A4DF-01A 2 1 5'UTR-5'UTR Intra-chr q22.1 65241 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0284-C1orf135 KIAA0284 chr14 105331850 - C1orf135 chr1 26164045 - Exonic hg19 ESCA TCGA-L5-A8NE-01A 8 78 5'UTR-CDS Inter-chr Seq+ 65242 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0317-CELA3B KIAA0317 chr14 75139534 - CELA3B chr1 22304862 + Exonic hg19 PRAD TCGA-YL-A8SC-01A 4 1 Out-of-frame Inter-chr p36.12 65243 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0317-DPEP1 KIAA0317 chr14 75136352 - DPEP1 chr16 89702316 + Exonic hg19 SKCM TCGA-EE-A2MS-06A 6 1 Out-of-frame Inter-chr q24.3 65244 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0319L-CIB2 KIAA0319L chr1 36022808 - CIB2 chr15 78403618 - Exonic hg19 LIHC TCGA-BW-A5NO-01A 39 34 5'UTR-CDS Inter-chr p34.3 q25.1 Seq+ 65245 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0319L-EIF4G3 KIAA0319L chr1 36019951 - EIF4G3 chr1 21415706 - Exonic hg19 UCEC TCGA-A5-A3LP-01A 6 4 CDS-5'UTR Intra-chr p34.3 p36.12 Seq+ 65246 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0319L-GOLGA1 KIAA0319L chr1 35972213 - GOLGA1 chr9 127652757 - Exonic hg19 KIRC TCGA-DV-5576-01A 44 25 In-Frame Inter-chr p34.3 q33.3 Seq+ 65247 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0319L-ODF2L KIAA0319L chr1 35972213 - ODF2L chr1 86838223 - Exonic hg19 PAAD TCGA-3A-A9IX-01A 4 1 In-Frame Intra-chr p34.3 p22.3 65248 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0319L-PHC2 KIAA0319L chr1 35907847 - PHC2 chr1 33790620 - Exonic hg19 BRCA TCGA-D8-A1XJ-01A 66 66 Out-of-frame Intra-chr p34.3 p35.1 Seq+ 65249 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0319L-UBA6 KIAA0319L chr1 35972213 - UBA6 chr4 68534392 - Exonic hg19 KIRP TCGA-J7-8537-01A 55 40 In-Frame Inter-chr p34.3 q13.2 Seq+ 65250 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0355-SLC7A9 KIAA0355 chr19 34840058 - SLC7A9 chr19 33324229 - Exonic hg19 SARC TCGA-DX-A8BN-01A 67 45 Out-of-frame Intra-chr q13.11 Seq+ 65251 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0368-C9orf84 KIAA0368 chr9 114235177 - C9orf84 chr9 114510479 - Exonic hg19 ESCA TCGA-L5-A4OS-01A 2 10 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 65252 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0368-C9orf89 KIAA0368 chr9 114145491 - C9orf89 chr9 95869956 + Exonic hg19 COAD TCGA-AY-6196-01A 12 5 Out-of-frame Intra-chr q31.3 65253 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0368-PACS1 KIAA0368 chr9 114182297 - PACS1 chr11 66000431 + Exonic hg19 BRCA TCGA-D8-A1JI-01A 10 6 Out-of-frame Inter-chr q31.3 q13.1 Seq+ 65254 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0368-WNK2 KIAA0368 chr9 114246396 - WNK2 chr9 95991978 + Exonic hg19 BRCA TCGA-A8-A06Y-01A 2 1 Out-of-frame Intra-chr q31.3 q22.31 Tumor suppressor gene Seq+ 65255 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0391-AKAP6 KIAA0391 chr14 35649983 - AKAP6 chr14 33290608 + Exonic hg19 LUAD TCGA-86-8669-01A 2 3 In-Frame Intra-chr q13.2 q12 Seq+ 65256 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0391-FAM177A1 KIAA0391 chr14 35649983 - FAM177A1 chr14 35546356 + Exonic hg19 KIRC TCGA-B0-4849-01A 15 9 In-Frame Intra-chr q13.2 q13.2 Seq+ 65257 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0391-FAM177A1 KIAA0391 chr14 35649983 - FAM177A1 chr14 35546356 + Exonic hg19 HNSC TCGA-CV-A45U-01A 20 24 In-Frame Intra-chr q13.2 q13.2 Seq+ 65258 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0430-EEF2K KIAA0430 chr16 15694285 - EEF2K chr16 22291519 + Exonic hg19 BLCA TCGA-GC-A4ZW-01A 15 2 Out-of-frame Intra-chr p12.2 Seq+ 65259 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0430-IQCK KIAA0430 chr16 15724189 - IQCK chr16 19867809 + Exonic hg19 BLCA TCGA-BT-A2LB-01A 137 96 Out-of-frame Intra-chr p12.3 Seq+ 65260 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0528-BCAT1 KIAA0528 chr12 22627685 - BCAT1 chr12 25002883 - Exonic hg19 PAAD TCGA-HZ-A49I-01A 4 1 In-Frame Intra-chr p12.1 65261 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0528-IAPP KIAA0528 chr12 22659645 - IAPP chr12 21526271 + Exonic hg19 STAD TCGA-IP-7968-01A 7 13 CDS-5'UTR Intra-chr p12.1 65262 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0528-ITPR2 KIAA0528 chr12 22666228 - ITPR2 chr12 26493261 - Exonic hg19 BRCA TCGA-E2-A1LL-01A 51 27 In-Frame Intra-chr p11.23 Seq+ 65263 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0528-PLCZ1 KIAA0528 chr12 22635491 - PLCZ1 chr12 18890443 - Exonic hg19 BRCA TCGA-AR-A1AR-01A 6 4 CDS-5'UTR Intra-chr p12.3 65264 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0528-SOX5 KIAA0528 chr12 22606830 - SOX5 chr12 23887686 - Exonic hg19 STAD TCGA-CD-A48C-01A 2 18 In-Frame Intra-chr p12.1 Transcription factor Seq+ 65265 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0556-NECAB2 KIAA0556 chr16 27585277 - NECAB2 chr16 84005756 + Exonic hg19 BRCA TCGA-E9-A1N8-01A 2 1 In-Frame Intra-chr p12.1 q23.3 Seq+ 65266 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0564-COG5 KIAA0564 chr13 42524072 - COG5 chr7 107002865 - Exonic hg19 PRAD TCGA-EJ-5510-01A 3 1 In-Frame Inter-chr 65267 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0564-MYO5C KIAA0564 chr13 42407507 - MYO5C chr15 52498163 - Exonic hg19 CESC TCGA-C5-A8YR-01A 2 1 Out-of-frame Inter-chr q21.2 65268 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0564-PTPRG KIAA0564 chr13 42481722 - PTPRG chr3 61975299 + Exonic hg19 BRCA TCGA-BH-A0HY-01A 2 1 Out-of-frame Inter-chr p14.2 65269 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0564-RB1 KIAA0564 chr13 42439872 - RB1 chr13 48916735 + Exonic hg19 BRCA TCGA-BH-A18G-01A 2 7 In-Frame Intra-chr q14.2 Oncogene Tumor suppressor gene 65270 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0564-RICTOR KIAA0564 chr13 42534989 - RICTOR chr5 38964994 - Exonic hg19 SKCM TCGA-EE-A184-06A 2 2 Out-of-frame Inter-chr p13.1 65271 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0586-MPP5 KIAA0586 chr14 58910893 - MPP5 chr14 67799497 + Exonic hg19 GBM TCGA-02-0033-01A 2 3 In-Frame Intra-chr q23.1 q23.3 65272 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0664-DLG5 KIAA0664 chr17 2595055 - DLG5 chr10 79603464 - Exonic hg19 BRCA TCGA-E9-A1N4-01A 2 3 In-Frame Inter-chr q22.3 65273 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0825-GPR98 KIAA0825 chr5 93918138 - GPR98 chr5 90124761 + Exonic hg19 PRAD TCGA-ZG-A9ND-01A 3 3 5'UTR-5'UTR Intra-chr q15 65274 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0825-HSPH1 KIAA0825 chr5 93855953 - HSPH1 chr13 31714446 - Exonic hg19 BRCA TCGA-AC-A3OD-01A 2 4 Out-of-frame Inter-chr q15 q12.3 65275 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0825-MCTP1 KIAA0825 chr5 93954205 - MCTP1 chr5 94050591 - Exonic hg19 PRAD TCGA-G9-7521-01A 10 4 5'UTR-CDS Intra-chr q15 q15 Seq+ 65276 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0889-RALY KIAA0889 chr20 35491061 - RALY chr20 32619328 + Exonic hg19 SKCM TCGA-FS-A1ZE-06A 28 17 Out-of-frame Intra-chr q11.22 65277 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0889-RPS6KA5 KIAA0889 chr20 35431259 - RPS6KA5 chr14 91444868 - Exonic hg19 BLCA TCGA-BL-A0C8-01A 2 2 Out-of-frame Inter-chr q32.11 65278 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0907-ARHGEF2 KIAA0907 chr1 155891166 - ARHGEF2 chr1 155939091 - Exonic hg19 LUSC TCGA-85-8580-01A 5 9 In-Frame Intra-chr q22 q22 Seq+ 65279 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0907-ARHGEF2 KIAA0907 chr1 155893418 - ARHGEF2 chr1 155936270 - Exonic hg19 BLCA TCGA-XF-A9T0-01A 23 20 In-Frame Intra-chr q22 q22 Seq+ 65280 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0907-CD276 KIAA0907 chr1 155887290 - CD276 chr15 74001989 + Exonic hg19 CESC TCGA-MA-AA41-01A 19 7 Out-of-frame Inter-chr q22 q24.1 Seq+ 65281 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0922-ARFIP1 KIAA0922 chr4 154471293 - ARFIP1 chr4 153791905 + Exonic hg19 PRAD TCGA-EJ-A46G-01A 2 2 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 65282 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0922-MND1 KIAA0922 chr4 154525582 - MND1 chr4 154315414 + Exonic hg19 BRCA TCGA-C8-A12K-01A 7 4 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 65283 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0922-MND1 KIAA0922 chr4 154395040 - MND1 chr4 154271216 + Exonic hg19 UCEC TCGA-FI-A3PX-01A 2 1 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 65284 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0930-ANK3 KIAA0930 chr22 45636521 - ANK3 chr10 61898845 - Exonic hg19 BRCA TCGA-EW-A1OZ-01A 10 14 In-Frame Inter-chr q13.31 q21.2 Seq+ 65285 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0930-SMC1B KIAA0930 chr22 45607837 - SMC1B chr22 45741450 - Exonic hg19 CESC TCGA-DS-A3LQ-01A 11 9 In-Frame Intra-chr q13.31 q13.31 Seq+ 65286 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA0947-TERT KIAA0947 chr5 5448010 - TERT chr5 1282739 - Exonic hg19 LIHC TCGA-DD-AACS-01A 5 1 In-Frame Intra-chr p15.33 Oncogene 65287 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1033-AUTS2 KIAA1033 chr12 105501639 - AUTS2 chr7 69583118 + Exonic hg19 BRCA TCGA-D8-A1JP-01A 3 3 Out-of-frame Inter-chr q11.22 Seq+ 65288 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1033-HCAR1 KIAA1033 chr12 105536336 - HCAR1 chr12 123105249 - Exonic hg19 STAD TCGA-BR-7959-01A 21 92 Out-of-frame Intra-chr q24.31 Oncogene Seq+ 65289 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1033-LGR5 KIAA1033 chr12 105538650 - LGR5 chr12 71928895 + Exonic hg19 GBM TCGA-06-0129-01A 7 13 Out-of-frame Intra-chr q21.1 Seq+ 65290 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1033-PCDH9 KIAA1033 chr12 105534179 - PCDH9 chr13 67477737 - Exonic hg19 LUSC TCGA-46-6025-01A 6 3 In-Frame Inter-chr q21.32 Tumor suppressor gene 65291 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1033-PRDM4 KIAA1033 chr12 105514982 - PRDM4 chr12 108147886 - Exonic hg19 SARC TCGA-KD-A5QS-01A 3 2 Out-of-frame Intra-chr q23.3 Tumor suppressor gene Transcription factor Seq+ 65292 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1109-CCNA2 KIAA1109 chr4 123075267 - CCNA2 chr4 122742246 - Exonic hg19 LIHC TCGA-CC-5263-01A 39 12 5'UTR-CDS Intra-chr q27 q27 Seq+ 65293 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1109-CCNA2 KIAA1109 chr4 123075267 - CCNA2 chr4 122742246 - Exonic hg19 LIHC TCGA-DD-A1EK-01A 11 6 5'UTR-CDS Intra-chr q27 q27 Seq+ 65294 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1109-CCNA2 KIAA1109 chr4 123075267 - CCNA2 chr4 122742246 - Exonic hg19 LIHC TCGA-PD-A5DF-01A 13 18 5'UTR-CDS Intra-chr q27 q27 Seq+ 65295 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1109-CHODL KIAA1109 chr4 123188113 - CHODL chr21 19613305 + Exonic hg19 BRCA TCGA-AC-A2QH-01A 2 2 Out-of-frame Inter-chr q27 q21.1 65296 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1109-GPR125 KIAA1109 chr4 123260563 - GPR125 chr4 22394313 - Exonic hg19 BRCA TCGA-C8-A12L-01A 27 13 Out-of-frame Intra-chr q27 Seq+ 65297 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1109-NFKB1 KIAA1109 chr4 123075267 - NFKB1 chr4 103446669 + Exonic hg19 SARC TCGA-DX-A3U5-01A 3 6 5'UTR-5'UTR Intra-chr q27 q24 Oncogene Tumor suppressor gene Transcription factor Seq+ 65298 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1191-NOP16 KIAA1191 chr5 175777616 - NOP16 chr5 175811375 - Exonic hg19 LUSC TCGA-94-8491-01A 60 63 In-Frame Intra-chr q35.2 q35.2 Seq+ 65299 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1199-FAM108C1 KIAA1199 chr15 81230320 - FAM108C1 chr15 81041854 + Exonic hg19 OV TCGA-24-1431-01A 7 3 In-Frame Intra-chr 65300 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1199-KATNAL2 KIAA1199 chr15 81201647 - KATNAL2 chr18 44572828 + Exonic hg19 PRAD TCGA-XJ-A9DX-01A 4 4 Out-of-frame Inter-chr q21.1 Seq+ 65301 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1211-ITSN1 KIAA1211 chr4 57045596 - ITSN1 chr21 35091102 + Exonic hg19 BRCA TCGA-A1-A0SO-01A 2 3 5'UTR-5'UTR Inter-chr q12 q22.11 65302 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1211-NMU KIAA1211 chr4 57045596 - NMU chr4 56496627 - Exonic hg19 GBM TCGA-06-2559-01A 19 63 5'UTR-CDS Intra-chr q12 q12 Seq+ 65303 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1211-SCFD2 KIAA1211 chr4 57045596 - SCFD2 chr4 53773758 - Exonic hg19 LGG TCGA-HT-A5R7-01A 130 53 5'UTR-CDS Intra-chr q12 q12 Seq+ 65304 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1211-STMN1 KIAA1211 chr4 57045596 - STMN1 chr1 26231229 - Exonic hg19 BRCA TCGA-E2-A14Q-01A 24 35 5'UTR-5'UTR Inter-chr q12 p36.11 Seq+ 65305 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1217-C10orf67 KIAA1217 chr10 24822166 - C10orf67 chr10 23611466 - Exonic hg19 SKCM TCGA-EE-A20I-06A 15 13 In-Frame Intra-chr p12.2 p12.2 65306 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1217-FBXO18 KIAA1217 chr10 23984163 - FBXO18 chr10 5948000 + Exonic hg19 LGG TCGA-TQ-A8XE-02A 6 2 5'UTR-5'UTR Intra-chr p12.2 p15.1 65307 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1217-LPP KIAA1217 chr10 24528266 - LPP chr3 188242453 + Exonic hg19 LUSC TCGA-NC-A5HP-01A 4 4 Out-of-frame Inter-chr p12.2 q27.3 Oncogene Seq+ 65308 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1217-PFKFB3 KIAA1217 chr10 24544525 - PFKFB3 chr10 6255586 + Exonic hg19 BRCA TCGA-EW-A1P1-01A 3 1 Out-of-frame Intra-chr p12.2 p15.1 65309 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1217-SPAG6 KIAA1217 chr10 24669996 - SPAG6 chr10 22653782 + Exonic hg19 BLCA TCGA-DK-A2I1-01A 6 8 In-Frame Intra-chr p12.2 p12.2 65310 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1244-AC093158.1 KIAA1244 chr6 138483308 - AC093158.1 chr1 74902158 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 5 6 Out-of-frame Inter-chr p31.1 65311 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1244-GRIK2 KIAA1244 chr6 138601301 - GRIK2 chr6 102483216 + Exonic hg19 SARC TCGA-HB-A3YV-01A 11 5 Out-of-frame Intra-chr q16.3 Seq+ 65312 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1244-HMHA1 KIAA1244 chr6 138618092 - HMHA1 chr19 1073148 + Exonic hg19 PRAD TCGA-V1-A9ZR-01A 3 1 Out-of-frame Inter-chr 65313 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1244-MED20 KIAA1244 chr6 138564131 - MED20 chr6 41877260 - Exonic hg19 SARC TCGA-DX-A6BH-01A 2 4 In-Frame Intra-chr p21.1 65314 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1244-RFWD2 KIAA1244 chr6 138564131 - RFWD2 chr1 176145143 - Exonic hg19 SARC TCGA-DX-A6BH-01A 6 5 Out-of-frame Inter-chr q25.2 Tumor suppressor gene 65315 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1267-AARS KIAA1267 chr17 44143903 - AARS chr16 70295060 - Exonic hg19 SKCM TCGA-FR-A8YC-06A 21 11 Out-of-frame Inter-chr q22.1 65316 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1267-LAYN KIAA1267 chr17 44127899 - LAYN chr11 111414648 + Exonic hg19 BRCA TCGA-AC-A2FB-01A 60 56 Out-of-frame Inter-chr q23.1 65317 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1267-NSF KIAA1267 chr17 44144915 - NSF chr17 44827139 + Exonic hg19 BLCA TCGA-DK-A3IQ-01A 2 6 Out-of-frame Intra-chr 65318 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1267-NSF KIAA1267 chr17 44248221 - NSF chr17 44701610 + Exonic hg19 PRAD TCGA-V1-A9O9-01A 2 2 Out-of-frame Intra-chr 65319 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1267-ORMDL3 KIAA1267 chr17 44144915 - ORMDL3 chr17 38080478 - Exonic hg19 BRCA TCGA-AC-A23H-01A 202 186 Out-of-frame Intra-chr q21.1 65320 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1267-PARD3B KIAA1267 chr17 44159807 - PARD3B chr2 206265737 + Exonic hg19 LUSC TCGA-77-A5GH-01A 5 4 Out-of-frame Inter-chr q33.3 65321 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1267-PYY KIAA1267 chr17 44248221 - PYY chr17 42043900 - Exonic hg19 SARC TCGA-MB-A8JL-01A 7 8 Out-of-frame Intra-chr q21.31 65322 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1267-UNC45B KIAA1267 chr17 44248221 - UNC45B chr17 33507578 + Exonic hg19 LUSC TCGA-33-4532-01A 12 13 Out-of-frame Intra-chr q12 65323 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1267-WHSC1L1 KIAA1267 chr17 44143903 - WHSC1L1 chr8 38178690 - Exonic hg19 LUSC TCGA-85-8070-01A 37 18 Out-of-frame Inter-chr p11.23 Tumor suppressor gene 65324 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1310-BPIFB2 KIAA1310 chr2 97267853 - BPIFB2 chr20 31604848 + Exonic hg19 LUSC TCGA-O2-A52N-01A 3 2 Out-of-frame Inter-chr q11.21 65325 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1310-SHE KIAA1310 chr2 97267380 - SHE chr1 154471714 - Exonic hg19 UCEC TCGA-B5-A1MS-01B 3 2 Out-of-frame Inter-chr q21.3 65326 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1310-TSGA10 KIAA1310 chr2 97278555 - TSGA10 chr2 99720581 - Exonic hg19 PRAD TCGA-KK-A8ID-01A 10 4 Out-of-frame Intra-chr q11.2 65327 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1324L-ABCA13 KIAA1324L chr7 86547758 - ABCA13 chr7 48308577 + Exonic hg19 LUAD TCGA-44-A479-01A 2 3 Out-of-frame Intra-chr q21.12 p12.3 Seq+ 65328 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1328-DCC KIAA1328 chr18 34664195 - DCC chr18 50278424 + Exonic hg19 BLCA TCGA-G2-A2EL-01A 2 2 Out-of-frame Intra-chr q12.2 q21.2 Oncogene Tumor suppressor gene 65329 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1328-LIMCH1 KIAA1328 chr18 34539398 - LIMCH1 chr4 41663437 + Exonic hg19 LGG TCGA-DU-6407-02B 2 3 In-Frame Inter-chr q12.2 p13 65330 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1370-CCDC102B KIAA1370 chr15 52885775 - CCDC102B chr18 66721267 + Exonic hg19 SARC TCGA-SG-A6Z4-01A 2 4 Out-of-frame Inter-chr q22.1 65331 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1377-SHANK2 KIAA1377 chr11 101818873 - SHANK2 chr11 70935842 - Exonic hg19 SARC TCGA-DX-A3M1-01A 4 1 Out-of-frame Intra-chr q13.4 65332 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1409-BRF1 KIAA1409 chr14 94069764 - BRF1 chr14 105752713 - Exonic hg19 LGG TCGA-DU-A5TU-01A 6 2 Out-of-frame Intra-chr q32.33 Tumor suppressor gene 65333 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1409-LHFP KIAA1409 chr14 93799869 - LHFP chr13 40175527 - Exonic hg19 KIRC TCGA-B0-4688-01A 4 2 Out-of-frame Inter-chr q14.11 65334 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1429-CAMK2A KIAA1429 chr8 95541298 - CAMK2A chr5 149602276 - Exonic hg19 BRCA TCGA-BH-A0B9-01A 3 1 Out-of-frame Inter-chr q22.1 q32 Seq+ 65335 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1429-CPA6 KIAA1429 chr8 95565613 - CPA6 chr8 68536486 - Exonic hg19 BLCA TCGA-BT-A2LD-01A 2 4 Out-of-frame Intra-chr q22.1 q13.2 65336 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1429-FAM49B KIAA1429 chr8 95511602 - FAM49B chr8 130983241 - Exonic hg19 LUSC TCGA-98-A539-01A 2 1 CDS-3'UTR Intra-chr q22.1 q24.21 Seq+ 65337 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1429-PNLIPRP1 KIAA1429 chr8 95556055 - PNLIPRP1 chr10 118350642 + Exonic hg19 LUAD TCGA-86-8279-01A 6 6 CDS-5'UTR Inter-chr q22.1 q25.3 Seq+ 65338 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1429-SYBU KIAA1429 chr8 95547067 - SYBU chr8 110631268 - Exonic hg19 LGG TCGA-TQ-A7RV-01A 9 7 In-Frame Intra-chr q22.1 q23.2 Seq+ 65339 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1429-SYBU KIAA1429 chr8 95547067 - SYBU chr8 110631268 - Exonic hg19 LGG TCGA-TQ-A7RV-02A 5 9 In-Frame Intra-chr q22.1 q23.2 Seq+ 65340 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1430-AADAT KIAA1430 chr4 186111297 - AADAT chr4 171008399 - Exonic hg19 PRAD TCGA-EJ-5511-01A 16 3 Out-of-frame Intra-chr q33 65341 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1430-CCDC110 KIAA1430 chr4 186096940 - CCDC110 chr4 186384203 - Exonic hg19 BRCA TCGA-E2-A15E-01A 9 1 Out-of-frame Intra-chr q35.1 Seq+ 65342 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1430-CCDC110 KIAA1430 chr4 186096940 - CCDC110 chr4 186383862 - Exonic hg19 BRCA TCGA-E2-A15E-06A 14 15 In-Frame Intra-chr q35.1 Seq+ 65343 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1432-BNC2 KIAA1432 chr9 5656690 - BNC2 chr9 16583083 - Exonic hg19 HNSC TCGA-CV-7415-01A 4 1 In-Frame Intra-chr p22.2 Transcription factor 65344 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1432-C8orf85 KIAA1432 chr9 5690038 - C8orf85 chr8 117954797 + Exonic hg19 LUAD TCGA-75-6207-01A 70 55 Out-of-frame Inter-chr 65345 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1432-DCAF10 KIAA1432 chr9 5656690 - DCAF10 chr9 37819285 + Exonic hg19 LUAD TCGA-83-5908-01A 19 6 Out-of-frame Intra-chr p13.2 Seq+ 65346 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1432-EPYC KIAA1432 chr9 5690038 - EPYC chr12 91372039 - Exonic hg19 LUSC TCGA-96-7544-01A 40 26 Out-of-frame Inter-chr q21.33 Seq+ 65347 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1432-KANK1 KIAA1432 chr9 5629453 - KANK1 chr9 676890 + Exonic hg19 READ TCGA-AG-3902-01A 7 2 CDS-5'UTR Intra-chr p24.3 Tumor suppressor gene Seq+ 65348 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1432-KDM4C KIAA1432 chr9 5656690 - KDM4C chr9 7128066 + Exonic hg19 SARC TCGA-DX-AB2E-01A 16 8 In-Frame Intra-chr p24.1 Seq+ 65349 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1432-LARS KIAA1432 chr9 5757451 - LARS chr5 145515227 - Exonic hg19 ESCA TCGA-VR-A8Q7-01A 7 54 In-Frame Inter-chr q32 Seq+ 65350 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1432-PDCD1LG2 KIAA1432 chr9 5656690 - PDCD1LG2 chr9 5522533 + Exonic hg19 CESC TCGA-DS-A3LQ-01A 2 1 CDS-5'UTR Intra-chr p24.1 Seq+ 65351 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1432-PDCD1LG2 KIAA1432 chr9 5629453 - PDCD1LG2 chr9 5549335 + Exonic hg19 HNSC TCGA-HL-7533-01A 24 30 Out-of-frame Intra-chr p24.1 Seq+ 65352 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1432-PFN2 KIAA1432 chr9 5629453 - PFN2 chr3 149686337 - Exonic hg19 CESC TCGA-EA-A1QT-01A 70 31 In-Frame Inter-chr q25.1 Seq+ 65353 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1432-SLC1A1 KIAA1432 chr9 5720750 - SLC1A1 chr9 4544567 + Exonic hg19 LUSC TCGA-96-7544-01A 2 1 Out-of-frame Intra-chr p24.2 65354 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1467-TSPAN8 KIAA1467 chr12 13229077 - TSPAN8 chr12 71676599 - Exonic hg19 SARC TCGA-DX-A1KZ-01A 3 1 Out-of-frame Intra-chr q21.1 65355 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1468-NFATC1 KIAA1468 chr18 59855264 - NFATC1 chr18 77287528 + Exonic hg19 SKCM TCGA-ER-A19T-06A 6 5 In-Frame Intra-chr q21.33 q23 Transcription factor Seq+ 65356 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1522-PEX10 KIAA1522 chr1 33207790 - PEX10 chr1 2341890 - Exonic hg19 LIHC TCGA-DD-A39Z-01A 2 1 In-Frame Intra-chr p35.1 p36.32 65357 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1530-MAEA KIAA1530 chr4 1349033 - MAEA chr4 1305767 + Exonic hg19 LAML TCGA-AB-2991-03A 2 1 Out-of-frame Intra-chr p16.3 65358 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1549-BRAF KIAA1549 chr7 138545885 - BRAF chr7 140487384 - Exonic hg19 LGG TCGA-HT-7691-01A 3 1 In-Frame Intra-chr q34 q34 TKL:RAF Oncogene KB Pub 65359 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1598-C20orf12 KIAA1598 chr10 118764533 - C20orf12 chr20 18396093 - Exonic hg19 PRAD TCGA-EJ-8469-01A 29 9 Out-of-frame Inter-chr 65360 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1598-FAM24B KIAA1598 chr10 118764533 - FAM24B chr10 124615302 - Exonic hg19 BRCA TCGA-LL-A73Z-01A 12 4 5'UTR-5'UTR Intra-chr q26.13 Seq+ 65361 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1598-PDZD8 KIAA1598 chr10 118738767 - PDZD8 chr10 119049859 - Exonic hg19 LIHC TCGA-CC-5263-01A 10 4 In-Frame Intra-chr q26.11 Seq+ 65362 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1598-PRDX3 KIAA1598 chr10 118764533 - PRDX3 chr10 120934104 - Exonic hg19 BLCA TCGA-DK-A1A7-01A 3 6 In-Frame Intra-chr q26.11 Seq+ 65363 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1609-CYBA KIAA1609 chr16 84516198 - CYBA chr16 88709979 - Exonic hg19 LUSC TCGA-33-4582-01A 23 18 In-Frame Intra-chr q24.2 65364 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1704-KIAA0564 KIAA1704 chr13 45583014 - KIAA0564 chr13 42142441 - Exonic hg19 COAD TCGA-CM-5862-01A 153 179 Out-of-frame Intra-chr 65365 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1704-MEF2A KIAA1704 chr13 45563877 - MEF2A chr15 100211725 + Exonic hg19 PRAD TCGA-G9-6361-01A 4 3 Out-of-frame Inter-chr q26.3 Transcription factor 65366 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1731-C11orf75 KIAA1731 chr11 93400973 - C11orf75 chr11 93212435 - Exonic hg19 CESC TCGA-EK-A2PG-01A 6 4 CDS-5'UTR Intra-chr Seq+ 65367 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1731-CCDC67 KIAA1731 chr11 93394940 - CCDC67 chr11 93104204 + Exonic hg19 LIHC TCGA-G3-A5SL-01A 8 7 5'UTR-CDS Intra-chr Tumor suppressor gene 65368 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1731-WDR90 KIAA1731 chr11 93440063 - WDR90 chr16 705307 + Exonic hg19 BLCA TCGA-HQ-A2OE-01A 22 9 Out-of-frame Inter-chr p13.3 Seq+ 65369 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1737-C14orf166B KIAA1737 chr14 77564704 - C14orf166B chr14 77318708 + Exonic hg19 UCEC TCGA-BK-A139-02A 7 15 5'UTR-CDS Intra-chr Seq+ 65370 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1737-C14orf166B KIAA1737 chr14 77564704 - C14orf166B chr14 77332311 + Exonic hg19 BLCA TCGA-CF-A7I0-01A 8 19 5'UTR-CDS Intra-chr Seq+ 65371 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1737-NGFR KIAA1737 chr14 77564704 - NGFR chr17 47579425 + Exonic hg19 PCPG TCGA-QT-A5XN-01A 16 15 5'UTR-CDS Inter-chr q21.33 Tumor suppressor gene Seq+ 65372 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1755-C20orf152 KIAA1755 chr20 36851940 - C20orf152 chr20 34560551 + Exonic hg19 SKCM TCGA-FS-A1ZE-06A 43 2 In-Frame Intra-chr q11.23 65373 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1755-HS6ST2 KIAA1755 chr20 36851940 - HS6ST2 chrX 131763121 - Exonic hg19 BRCA TCGA-A2-A0D0-01A 8 13 Out-of-frame Inter-chr q11.23 q26.2 Seq+ 65374 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1797-C10orf90 KIAA1797 chr9 20990373 - C10orf90 chr10 128193654 - Exonic hg19 PRAD TCGA-J9-A8CM-01A 5 5 Out-of-frame Inter-chr q26.2 65375 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1797-C3orf78 KIAA1797 chr9 20720533 - C3orf78 chr3 52613034 + Exonic hg19 SKCM TCGA-WE-A8ZT-06A 9 6 Out-of-frame Inter-chr 65376 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1797-CD2 KIAA1797 chr9 20823114 - CD2 chr1 117303024 + Exonic hg19 UCEC TCGA-AX-A3G4-01A 26 12 Out-of-frame Inter-chr p13.1 65377 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1797-DENND4C KIAA1797 chr9 20770237 - DENND4C chr9 19369835 + Exonic hg19 STAD TCGA-CG-4443-01A 2 4 Out-of-frame Intra-chr p22.1 65378 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1797-ELAVL2 KIAA1797 chr9 20823114 - ELAVL2 chr9 23762247 - Exonic hg19 LUSC TCGA-63-A5MM-01A 8 3 Out-of-frame Intra-chr p21.3 65379 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1797-IFT74 KIAA1797 chr9 20823114 - IFT74 chr9 27009018 + Exonic hg19 SKCM TCGA-QB-AA9O-06A 4 6 Out-of-frame Intra-chr p21.2 65380 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1797-MOBKL2B KIAA1797 chr9 20867011 - MOBKL2B chr9 27359234 - Exonic hg19 GBM TCGA-27-2521-01A 4 4 Out-of-frame Intra-chr 65381 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1797-PDZRN4 KIAA1797 chr9 20789607 - PDZRN4 chr12 41946458 + Exonic hg19 PRAD TCGA-J9-A8CP-01A 12 12 Out-of-frame Inter-chr q12 65382 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1797-PSIP1 KIAA1797 chr9 20907241 - PSIP1 chr9 15490122 - Exonic hg19 STAD TCGA-CG-4304-01A 3 1 Out-of-frame Intra-chr p22.3 Oncogene 65383 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1797-PTPLAD2 KIAA1797 chr9 20882055 - PTPLAD2 chr9 21008145 - Exonic hg19 LUAD TCGA-75-7027-01A 29 23 Out-of-frame Intra-chr Tumor suppressor gene 65384 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1949-MDC1 KIAA1949 chr6 30654891 - MDC1 chr6 30668409 - Exonic hg19 KIRP TCGA-BQ-5891-01A 45 25 Out-of-frame Intra-chr Tumor suppressor gene 65385 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1949-NDUFV1 KIAA1949 chr6 30644166 - NDUFV1 chr11 67375697 + Exonic hg19 LUAD TCGA-78-7542-01A 2 6 Out-of-frame Inter-chr q13.2 65386 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1949-TNXB KIAA1949 chr6 30652185 - TNXB chr6 32021488 - Exonic hg19 SARC TCGA-3B-A9I3-01A 11 2 Out-of-frame Intra-chr 65387 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1958-WDR34 KIAA1958 chr9 115249398 - WDR34 chr9 131403218 - Exonic hg19 LUAD TCGA-91-6840-01A 6 4 5'UTR-CDS Intra-chr q32 q34.11 Seq+ 65388 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1967-FGFR2 KIAA1967 chr8 22462355 - FGFR2 chr10 123239535 - Exonic hg19 LUSC TCGA-66-2765-01A 7 15 5'UTR-CDS Inter-chr Tumor suppressor gene q26.13 TK:FGFR Oncogene Seq+ 65389 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA1967-PDLIM2 KIAA1967 chr8 22465578 - PDLIM2 chr8 22442334 + Exonic hg19 READ TCGA-EI-6884-01A 10 4 In-Frame Intra-chr Tumor suppressor gene p21.3 65390 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA2022-CXorf26 KIAA2022 chrX 74144718 - CXorf26 chrX 75393420 + Exonic hg19 PRAD TCGA-V1-A9O5-06A 11 9 5'UTR-CDS Intra-chr q13.3 Seq+ 65391 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA2026-CMTM7 KIAA2026 chr9 6007195 - CMTM7 chr3 32483332 + Exonic hg19 LGG TCGA-DU-7014-01A 12 8 Out-of-frame Inter-chr p24.1 p22.3 Seq+ 65392 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIAA2026-PHF20 KIAA2026 chr9 5988345 - PHF20 chr20 34487292 + Exonic hg19 LUSC TCGA-56-8082-01A 25 3 Out-of-frame Inter-chr p24.1 q11.22 Transcription factor 65393 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIDINS220-C3orf70 KIDINS220 chr2 8952525 - C3orf70 chr3 184801351 - Exonic hg19 GBM TCGA-06-0171-02A 3 18 Out-of-frame Inter-chr p25.1 q27.2 Seq+ 65394 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIDINS220-COLEC11 KIDINS220 chr2 8890242 - COLEC11 chr2 3651905 + Exonic hg19 SARC TCGA-X6-A8C6-01A 14 14 Out-of-frame Intra-chr p25.1 p25.3 Seq+ 65395 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIDINS220-EYS KIDINS220 chr2 8910800 - EYS chr6 64709076 - Exonic hg19 BLCA TCGA-GV-A3JW-01A 8 3 In-Frame Inter-chr p25.1 q12 Seq+ 65396 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIDINS220-MYT1L KIDINS220 chr2 8977610 - MYT1L chr2 2288275 - Exonic hg19 KIRP TCGA-G7-6792-01A 57 32 5'UTR-5'UTR Intra-chr p25.1 p25.3 Transcription factor Seq+ 65397 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIDINS220-SOX7 KIDINS220 chr2 8890242 - SOX7 chr8 10692285 - Exonic hg19 SARC TCGA-X6-A8C6-01A 4 1 CDS-5'UTR Inter-chr p25.1 p23.1 Tumor suppressor gene Transcription factor 65398 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF11-HIF1AN KIF11 chr10 94376589 - HIF1AN chr10 102296168 + Exonic hg19 SARC TCGA-JV-A75J-01A 3 1 In-Frame Intra-chr q23.33 q24.31 65399 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF11-STAT4 KIF11 chr10 94373376 - STAT4 chr2 191941051 - Exonic hg19 LIHC TCGA-PD-A5DF-01A 3 1 In-Frame Inter-chr q23.33 q32.3 Transcription factor 65400 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF13A-CCHCR1 KIF13A chr6 17849608 - CCHCR1 chr6 31113585 - Exonic hg19 LUSC TCGA-77-8138-01A 48 18 In-Frame Intra-chr p22.3 Seq+ 65401 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF13A-F13A1 KIF13A chr6 17987285 - F13A1 chr6 6197559 - Exonic hg19 LUSC TCGA-37-A5EM-01A 41 30 In-Frame Intra-chr p22.3 p25.1 Seq+ 65402 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF13A-KDM1B KIF13A chr6 17987285 - KDM1B chr6 18166498 + Exonic hg19 BLCA TCGA-4Z-AA80-01A 18 12 In-Frame Intra-chr p22.3 p22.3 Seq+ 65403 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF13A-PTPRK KIF13A chr6 17825999 - PTPRK chr6 128718833 - Exonic hg19 LUAD TCGA-44-7671-01A 3 3 In-Frame Intra-chr p22.3 Tumor suppressor gene Seq+ 65404 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF13A-TPMT KIF13A chr6 17987285 - TPMT chr6 18134120 - Exonic hg19 BRCA TCGA-A2-A0CX-01A 2 3 In-Frame Intra-chr p22.3 p22.3 Seq+ 65405 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF13A-TPMT KIF13A chr6 17987285 - TPMT chr6 18149402 - Exonic hg19 PRAD TCGA-XJ-A9DX-01A 4 6 CDS-5'UTR Intra-chr p22.3 p22.3 Seq+ 65406 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF13A-UBE2K KIF13A chr6 17987285 - UBE2K chr4 39776454 + Exonic hg19 SARC TCGA-DX-A8BU-01A 7 4 In-Frame Inter-chr p22.3 p14 Seq+ 65407 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF13B-C20orf194 KIF13B chr8 29013243 - C20orf194 chr20 3262412 - Exonic hg19 ESCA TCGA-R6-A8W5-01B 8 95 In-Frame Inter-chr p12 p13 Seq+ 65408 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF13B-CSGALNACT1 KIF13B chr8 28965656 - CSGALNACT1 chr8 19266205 - Exonic hg19 PRAD TCGA-V1-A9O9-01A 13 12 In-Frame Intra-chr p12 p21.3 Seq+ 65409 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF13B-EPN2 KIF13B chr8 29102863 - EPN2 chr17 19185268 + Exonic hg19 BRCA TCGA-B6-A0WV-01A 18 12 CDS-5'UTR Inter-chr p12 p11.2 Seq+ 65410 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF13B-EYA2 KIF13B chr8 28950262 - EYA2 chr20 45771698 + Exonic hg19 UCEC TCGA-DF-A2KR-01A 99 93 In-Frame Inter-chr p12 q13.12 Seq+ 65411 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF13B-FUT10 KIF13B chr8 29102863 - FUT10 chr8 33230322 - Exonic hg19 UVM TCGA-VD-A8KM-01A 11 3 Out-of-frame Intra-chr p12 p12 Seq+ 65412 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF13B-ODZ4 KIF13B chr8 28980108 - ODZ4 chr11 78387432 - Exonic hg19 BRCA TCGA-A2-A0ES-01A 31 16 In-Frame Inter-chr p12 Seq+ 65413 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF13B-PNOC KIF13B chr8 29023179 - PNOC chr8 28186652 + Exonic hg19 PRAD TCGA-KK-A8I6-01A 4 3 CDS-5'UTR Intra-chr p12 p21.1 Seq+ 65414 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF13B-PPP2R5B KIF13B chr8 28976385 - PPP2R5B chr11 64693320 + Exonic hg19 BLCA TCGA-2F-A9KW-01A 7 3 In-Frame Inter-chr p12 q13.1 Seq+ 65415 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF13B-SLC25A21 KIF13B chr8 28950262 - SLC25A21 chr14 37344209 - Exonic hg19 HNSC TCGA-F7-A623-01A 9 3 Out-of-frame Inter-chr p12 q13.3 Seq+ 65416 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF13B-SMTN KIF13B chr8 28929137 - SMTN chr22 31483951 + Exonic hg19 LIHC TCGA-G3-A25Y-01A 19 3 Out-of-frame Inter-chr p12 q12.2 Seq+ 65417 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF13B-TMEM217 KIF13B chr8 29102863 - TMEM217 chr6 37186817 - Exonic hg19 UCEC TCGA-EO-A3B1-01A 10 1 CDS-5'UTR Inter-chr p12 p21.2 Seq+ 65418 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF13B-TMEM66 KIF13B chr8 29003895 - TMEM66 chr8 29927575 - Exonic hg19 BRCA TCGA-AO-A0J5-01A 29 10 In-Frame Intra-chr p12 Seq+ 65419 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF15-TLE4 KIF15 chr3 44828066 - TLE4 chr9 82188604 + Exonic hg19 ESCA TCGA-L5-A891-01A 2 6 Out-of-frame Inter-chr q21.31 65420 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF15-ZNF167 KIF15 chr3 44803376 - ZNF167 chr3 44609404 + Exonic hg19 LUAD TCGA-55-6969-01A 2 1 In-Frame Intra-chr 65421 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF16B-HIPK3 KIF16B chr20 16488603 - HIPK3 chr11 33368839 + Exonic hg19 BRCA TCGA-A8-A07W-01A 2 2 Out-of-frame Inter-chr p12.1 p13 CMGC:DYRK Seq+ 65422 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF16B-MLIP KIF16B chr20 16474936 - MLIP chr6 53847556 + Exonic hg19 SARC TCGA-DX-A7ET-01A 3 4 CDS-5'UTR Inter-chr p12.1 p12.1 65423 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF16B-RRBP1 KIF16B chr20 16506737 - RRBP1 chr20 17641173 - Exonic hg19 LUAD TCGA-44-3919-01A 2 10 CDS-5'UTR Intra-chr p12.1 p12.1 Seq+ 65424 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF18B-C17orf104 KIF18B chr17 43010280 - C17orf104 chr17 42734495 + Exonic hg19 ESCA TCGA-VR-A8EY-01A 2 15 In-Frame Intra-chr q21.31 Seq+ 65425 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF18B-C1QL1 KIF18B chr17 43024996 - C1QL1 chr17 43037735 - Exonic hg19 ACC TCGA-OR-A5LD-01A 2 1 5'UTR-CDS Intra-chr q21.31 q21.31 Seq+ 65426 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF18B-TUBG1 KIF18B chr17 43024996 - TUBG1 chr17 40764093 + Exonic hg19 PRAD TCGA-HC-8216-01A 8 3 5'UTR-CDS Intra-chr q21.31 q21.2 Seq+ 65427 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF1A-C2orf54 KIF1A chr2 241697777 - C2orf54 chr2 241831180 - Exonic hg19 UCEC TCGA-A5-A7WK-01A 13 7 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 65428 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF1A-C2orf54 KIF1A chr2 241682346 - C2orf54 chr2 241831180 - Exonic hg19 LUAD TCGA-NJ-A4YF-01A 4 7 In-Frame Intra-chr q37.3 q37.3 Seq+ 65429 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF1B-AGTRAP KIF1B chr1 10357304 - AGTRAP chr1 11805860 + Exonic hg19 LUAD TCGA-78-7153-01A 7 6 In-Frame Intra-chr p36.22 Tumor suppressor gene p36.22 Seq+ 65430 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF1B-FAM58A KIF1B chr1 10292492 - FAM58A chrX 152861645 - Exonic hg19 ACC TCGA-OR-A5J7-01A 166 99 In-Frame Inter-chr p36.22 Tumor suppressor gene q28 Seq+ 65431 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF1B-HAGH KIF1B chr1 10428596 - HAGH chr16 1873038 - Exonic hg19 UCS TCGA-NA-A4R1-01A 8 3 Out-of-frame Inter-chr p36.22 Tumor suppressor gene p13.3 Seq+ 65432 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF1B-MYO5B KIF1B chr1 10328321 - MYO5B chr18 47527781 - Exonic hg19 BRCA TCGA-E2-A159-01A 6 2 Out-of-frame Inter-chr p36.22 Tumor suppressor gene q21.1 Seq+ 65433 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF1B-NF1 KIF1B chr1 10403345 - NF1 chr17 29683478 + Exonic hg19 BLCA TCGA-ZF-A9R3-01A 9 11 In-Frame Inter-chr p36.22 Tumor suppressor gene q11.2 Oncogene Tumor suppressor gene Seq+ 65434 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF1B-RERE KIF1B chr1 10435431 - RERE chr1 8617582 - Exonic hg19 COAD TCGA-A6-5664-01A 3 1 Out-of-frame Intra-chr p36.22 Tumor suppressor gene p36.23 Seq+ 65435 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF1B-SHISA4 KIF1B chr1 10292492 - SHISA4 chr1 201858573 + Exonic hg19 UCEC TCGA-AJ-A3I9-01A 41 16 In-Frame Intra-chr p36.22 Tumor suppressor gene q32.1 Seq+ 65436 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF1B-UBE4B KIF1B chr1 10292492 - UBE4B chr1 10238702 + Exonic hg19 GBM TCGA-16-1045-01B 97 158 Out-of-frame Intra-chr p36.22 Tumor suppressor gene p36.22 Tumor suppressor gene Seq+ 65437 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF1B-UBE4B KIF1B chr1 10292492 - UBE4B chr1 10231196 + Exonic hg19 KIRC TCGA-BP-4338-01A 5 4 Out-of-frame Intra-chr p36.22 Tumor suppressor gene p36.22 Tumor suppressor gene Seq+ 65438 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF1B-UBE4B KIF1B chr1 10270936 - UBE4B chr1 10238702 + Exonic hg19 LIHC TCGA-G3-A25X-01A 4 6 5'UTR-CDS Intra-chr p36.22 Tumor suppressor gene p36.22 Tumor suppressor gene Seq+ 65439 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF1C-NDEL1 KIF1C chr17 4918132 - NDEL1 chr17 8347578 + Exonic hg19 PRAD TCGA-J4-A67K-01A 5 3 CDS-5'UTR Intra-chr p13.2 p13.1 Seq+ 65440 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF20B-LIPJ KIF20B chr10 91505716 - LIPJ chr10 90362333 + Exonic hg19 LIHC TCGA-BC-A112-01A 5 8 Out-of-frame Intra-chr q23.31 q23.31 Seq+ 65441 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF21A-CCDC114 KIF21A chr12 39724548 - CCDC114 chr19 48815373 - Exonic hg19 STAD TCGA-KB-A93J-01A 3 15 Out-of-frame Inter-chr q12 q13.33 Seq+ 65442 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF21A-COPS7B KIF21A chr12 39713708 - COPS7B chr2 232656443 + Exonic hg19 SARC TCGA-3B-A9HL-01A 7 8 Out-of-frame Inter-chr q12 q37.1 Seq+ 65443 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF21A-CPM KIF21A chr12 39836729 - CPM chr12 69279669 - Exonic hg19 TGCT TCGA-2G-AAGT-01A 8 5 Out-of-frame Intra-chr q12 q15 Seq+ 65444 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF21A-LMF1 KIF21A chr12 39836729 - LMF1 chr16 984254 - Exonic hg19 LUAD TCGA-49-4501-01A 15 18 CDS-3'UTR Inter-chr q12 p13.3 65445 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF21A-MIPOL1 KIF21A chr12 39836729 - MIPOL1 chr14 37736143 + Exonic hg19 LUSC TCGA-XC-AA0X-01A 2 1 Out-of-frame Inter-chr q12 q13.3 65446 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF21A-SLC2A13 KIF21A chr12 39836729 - SLC2A13 chr12 40265763 - Exonic hg19 LUAD TCGA-55-A493-01A 2 2 In-Frame Intra-chr q12 q12 Seq+ 65447 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF21A-TMTC2 KIF21A chr12 39836729 - TMTC2 chr12 83424577 + Exonic hg19 LUAD TCGA-78-7150-01A 6 3 Out-of-frame Intra-chr q12 q21.31 Seq+ 65448 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF21A-TSPAN8 KIF21A chr12 39836729 - TSPAN8 chr12 71551567 - Exonic hg19 HNSC TCGA-CR-6478-01A 31 23 CDS-5'UTR Intra-chr q12 q21.1 Seq+ 65449 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF21B-F13B KIF21B chr1 200992471 - F13B chr1 197032187 - Exonic hg19 LGG TCGA-DU-6542-01A 4 2 Out-of-frame Intra-chr q32.1 q31.3 Seq+ 65450 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF22-PRKCB KIF22 chr16 29802150 - PRKCB chr16 24043457 + Exonic hg19 ESCA TCGA-R6-A6XG-01B 18 24 Out-of-frame Intra-chr p11.2 p12.2 Tumor suppressor gene Seq+ 65451 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF23-PAQR5 KIF23 chr15 69709850 - PAQR5 chr15 69695920 + Exonic hg19 ESCA TCGA-L5-A8NE-01A 3 28 Out-of-frame Intra-chr q23 q23 Seq+ 65452 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF23-PIAS1 KIF23 chr15 69721552 - PIAS1 chr15 68479880 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 4 5 Out-of-frame Intra-chr q23 q23 Tumor suppressor gene Seq+ 65453 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF24-ZCCHC7 KIF24 chr9 34286615 - ZCCHC7 chr9 37327796 + Exonic hg19 UCS TCGA-N8-A56S-01A 7 8 In-Frame Intra-chr p13.3 p13.2 Seq+ 65454 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF26A-C14orf2 KIF26A chr14 104605625 - C14orf2 chr14 104379031 - Exonic hg19 STAD TCGA-RD-A8N9-01A 2 8 Out-of-frame Intra-chr q32.33 q32.33 Seq+ 65455 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF26B-AKT3 KIF26B chr1 245318789 - AKT3 chr1 243828185 - Exonic hg19 LUSC TCGA-LA-A7SW-01A 2 3 Out-of-frame Intra-chr AGC:Akt Oncogene 65456 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF26B-C1orf101 KIF26B chr1 245530669 - C1orf101 chr1 244773542 + Exonic hg19 PAAD TCGA-LB-A7SX-01A 20 18 In-Frame Intra-chr Seq+ 65457 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF26B-FMN2 KIF26B chr1 245852109 - FMN2 chr1 240286479 + Exonic hg19 LGG TCGA-KT-A7W1-01A 14 18 In-Frame Intra-chr q43 Seq+ 65458 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF26B-SDCCAG8 KIF26B chr1 245766085 - SDCCAG8 chr1 243504341 + Exonic hg19 UCS TCGA-NA-A4R0-01A 4 1 In-Frame Intra-chr 65459 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF26B-SMYD3 KIF26B chr1 245319985 - SMYD3 chr1 246093239 - Exonic hg19 LUSC TCGA-22-5479-01A 2 2 In-Frame Intra-chr q44 Transcription factor Seq+ 65460 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF26B-SMYD3 KIF26B chr1 245319985 - SMYD3 chr1 246093239 - Exonic hg19 LUSC TCGA-56-8083-01A 3 2 In-Frame Intra-chr q44 Transcription factor Seq+ 65461 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF26B-SMYD3 KIF26B chr1 245772830 - SMYD3 chr1 246093239 - Exonic hg19 LUSC TCGA-63-A5MB-01A 3 1 In-Frame Intra-chr q44 Transcription factor Seq+ 65462 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF26B-SMYD3 KIF26B chr1 245530669 - SMYD3 chr1 245927451 - Exonic hg19 LUSC TCGA-85-8481-01A 2 1 Out-of-frame Intra-chr q44 Transcription factor Seq+ 65463 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF26B-SMYD3 KIF26B chr1 245319985 - SMYD3 chr1 246093239 - Exonic hg19 HNSC TCGA-CR-7389-01A 2 3 In-Frame Intra-chr q44 Transcription factor Seq+ 65464 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF26B-SMYD3 KIF26B chr1 245319985 - SMYD3 chr1 246027188 - Exonic hg19 SARC TCGA-DX-AB2W-01A 2 3 In-Frame Intra-chr q44 Transcription factor Seq+ 65465 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF26B-SMYD3 KIF26B chr1 245319985 - SMYD3 chr1 246093239 - Exonic hg19 HNSC TCGA-IQ-A61O-01A 3 3 In-Frame Intra-chr q44 Transcription factor Seq+ 65466 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF26B-SMYD3 KIF26B chr1 245319985 - SMYD3 chr1 246027188 - Exonic hg19 UCS TCGA-NA-A4R0-01A 2 1 In-Frame Intra-chr q44 Transcription factor Seq+ 65467 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF26B-SMYD3 KIF26B chr1 245583047 - SMYD3 chr1 245927451 - Exonic hg19 SARC TCGA-X6-A7WC-01A 3 1 In-Frame Intra-chr q44 Transcription factor Seq+ 65468 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF26B-SMYD3 KIF26B chr1 245319985 - SMYD3 chr1 246093239 - Exonic hg19 BLCA TCGA-ZF-AA53-01A 3 1 In-Frame Intra-chr q44 Transcription factor Seq+ 65469 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF27-TRPM6 KIF27 chr9 86495212 - TRPM6 chr9 77347652 - Exonic hg19 SARC TCGA-K1-A6RU-01A 2 4 Out-of-frame Intra-chr q21.32 q21.13 65470 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF2A-ADAMTS19 KIF2A chr5 61602363 - ADAMTS19 chr5 128956311 + Exonic hg19 HNSC TCGA-CR-7380-01A 6 1 Out-of-frame Intra-chr q12.1 q23.3 65471 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF2A-RNF180 KIF2A chr5 61602363 - RNF180 chr5 63665442 + Exonic hg19 PRAD TCGA-J9-A52D-01A 17 7 In-Frame Intra-chr q12.1 q12.3 Tumor suppressor gene Seq+ 65472 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF2C-C1orf228 KIF2C chr1 45219505 - C1orf228 chr1 45189794 + Exonic hg19 CESC TCGA-JW-A5VI-01A 3 3 Out-of-frame Intra-chr p34.1 p34.1 Seq+ 65473 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF3B-NINL KIF3B chr20 30904677 - NINL chr20 25507234 - Exonic hg19 HNSC TCGA-DQ-7591-01A 4 8 CDS-5'UTR Intra-chr q11.21 p11.21 Seq+ 65474 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF3B-SCFD2 KIF3B chr20 30898984 - SCFD2 chr4 53787037 - Exonic hg19 SARC TCGA-DX-AB2Z-01A 4 3 Out-of-frame Inter-chr q11.21 q12 65475 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF3B-TOX2 KIF3B chr20 30898984 - TOX2 chr20 42602007 + Exonic hg19 COAD TCGA-G4-6625-01A 5 9 In-Frame Intra-chr q11.21 q13.12 Seq+ 65476 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF3C-ADCY3 KIF3C chr2 26203242 - ADCY3 chr2 25095588 - Exonic hg19 OV TCGA-59-A5PD-01A 6 16 In-Frame Intra-chr p23.3 p23.3 Seq+ 65477 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF3C-RBKS KIF3C chr2 26203242 - RBKS chr2 28004655 - Exonic hg19 OV TCGA-29-1699-01A 2 10 In-Frame Intra-chr p23.3 p23.2 Seq+ 65478 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF3C-SRM KIF3C chr2 26203242 - SRM chr1 11119402 - Exonic hg19 UCS TCGA-N8-A4PL-01A 26 7 Out-of-frame Inter-chr p23.3 p36.22 TK:Src Seq+ 65479 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF5A-NAV3 KIF5A chr12 57976998 - NAV3 chr12 78594253 + Exonic hg19 SARC TCGA-DX-A7EI-01A 12 26 3'UTR-CDS Intra-chr q13.3 q21.2 Seq+ 65480 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF5B-EPC1 KIF5B chr10 32317356 - EPC1 chr10 32562209 - Exonic hg19 ESCA TCGA-V5-AASW-01A 6 30 Out-of-frame Intra-chr p11.22 p11.22 Seq+ 65481 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF5B-HHAT KIF5B chr10 32337392 - HHAT chr1 210637849 + Exonic hg19 PRAD TCGA-VN-A88L-01A 21 11 In-Frame Inter-chr p11.22 Seq+ 65482 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF5B-HPS4 KIF5B chr10 32337392 - HPS4 chr22 26860792 - Exonic hg19 BRCA TCGA-BH-A0B7-01A 76 62 Out-of-frame Inter-chr p11.22 q12.1 Seq+ 65483 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF5B-MET KIF5B chr10 32306071 - MET chr7 116411903 + Exonic hg19 LUAD TCGA-93-A4JN-01A 31 8 In-Frame Inter-chr p11.22 q31.2 TK:Met Oncogene KB Pub Seq+ 65484 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF5B-SVIL KIF5B chr10 32337392 - SVIL chr10 29975580 - Exonic hg19 LGG TCGA-DU-6407-02B 17 16 CDS-5'UTR Intra-chr p11.22 p11.23 Seq+ 65485 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF5C-GULP1 KIF5C chr2 149868197 - GULP1 chr2 189458667 + Exonic hg19 SARC TCGA-DX-AB2O-01A 18 7 3'UTR-CDS Intra-chr q32.1 Seq+ 65486 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF5C-STK39 KIF5C chr2 149633312 - STK39 chr2 169038600 - Exonic hg19 ESCA TCGA-IG-A3YB-01A 3 8 Out-of-frame Intra-chr q24.3 Seq+ 65487 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF5C-TTN KIF5C chr2 149840280 - TTN chr2 179540722 - Exonic hg19 PRAD TCGA-J4-A83J-01A 5 1 Out-of-frame Intra-chr q31.2 CAMK:MLCK 65488 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIF9-GYG1 KIF9 chr3 47323985 - GYG1 chr3 148741840 + Exonic hg19 UCEC TCGA-B5-A3S1-01A 14 21 5'UTR-CDS Intra-chr p21.31 q24 Seq+ 65489 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIFAP3-BRP44 KIFAP3 chr1 169923152 - BRP44 chr1 167893775 - Exonic hg19 SARC TCGA-DX-A7EU-01A 24 1 Out-of-frame Intra-chr q24.2 65490 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIFAP3-C1orf112 KIFAP3 chr1 169985603 - C1orf112 chr1 169806068 + Exonic hg19 SARC TCGA-DX-A1L3-01A 14 2 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 65491 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIFAP3-COPA KIFAP3 chr1 169923152 - COPA chr1 160282957 - Exonic hg19 SKCM TCGA-EE-A3AH-06A 2 6 In-Frame Intra-chr q24.2 q23.2 Seq+ 65492 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIFAP3-DUSP27 KIFAP3 chr1 169993559 - DUSP27 chr1 167095024 + Exonic hg19 BRCA TCGA-OL-A5D8-01A 6 2 Out-of-frame Intra-chr q24.2 q24.1 65493 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIFC3-CNGB1 KIFC3 chr16 57828911 - CNGB1 chr16 57921978 - Exonic hg19 LUAD TCGA-91-7771-01A 9 3 Out-of-frame Intra-chr q21 q21 Seq+ 65494 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIRREL-CD48 KIRREL chr1 157963518 - CD48 chr1 160654979 - Exonic hg19 SKCM TCGA-FR-A3YN-06A 7 2 In-Frame Intra-chr q23.1 q23.3 Seq+ 65495 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIRREL-DDR2 KIRREL chr1 157963518 - DDR2 chr1 162625001 + Exonic hg19 SKCM TCGA-DA-A1IA-06A 2 1 CDS-5'UTR Intra-chr q23.1 q23.3 TK:DDR Oncogene Tumor suppressor gene 65496 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIRREL-RBP7 KIRREL chr1 157963518 - RBP7 chr1 10075840 + Exonic hg19 BRCA TCGA-BH-A1EV-01A 6 12 Out-of-frame Intra-chr q23.1 p36.22 Seq+ 65497 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIT-DNAJB14 KIT chr4 55598164 - DNAJB14 chr4 100851778 - Exonic hg19 LUSC TCGA-96-8169-01A 3 1 Out-of-frame Intra-chr q12 TK:PDGFR Oncogene q23 65498 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIT-FAR1 KIT chr4 55606881 - FAR1 chr11 13744912 + Exonic hg19 SKCM TCGA-FS-A1ZG-06A 2 1 Out-of-frame Inter-chr q12 TK:PDGFR Oncogene p15.3 65499 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIT-HOPX KIT chr4 55524248 - HOPX chr4 57522178 - Exonic hg19 LGG TCGA-S9-A89Z-01A 5 3 Out-of-frame Intra-chr q12 TK:PDGFR Oncogene q12 Tumor suppressor gene Seq+ 65500 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIT-SLC4A4 KIT chr4 55599358 - SLC4A4 chr4 72102293 + Exonic hg19 LUSC TCGA-85-8287-01A 25 8 CDS-5'UTR Intra-chr q12 TK:PDGFR Oncogene q13.3 Seq+ 65501 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KIT-UGT2B7 KIT chr4 55524248 - UGT2B7 chr4 69955190 + Exonic hg19 SKCM TCGA-EB-A44O-01A 10 4 Out-of-frame Intra-chr q12 TK:PDGFR Oncogene q13.2 Seq+ 65502 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KITLG-CCDC6 KITLG chr12 88974041 - CCDC6 chr10 61612460 - Exonic hg19 LUSC TCGA-22-1017-01A 12 4 In-Frame Inter-chr q21.32 q21.2 Seq+ 65503 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KITLG-RP11-366L20.2 KITLG chr12 88898936 - RP11-366L20.2 chr12 66245432 - Exonic hg19 SARC TCGA-3B-A9HO-01A 4 2 Out-of-frame Intra-chr q21.32 65504 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KITLG-ST8SIA6 KITLG chr12 88974041 - ST8SIA6 chr10 17373551 - Exonic hg19 SARC TCGA-DX-A1L4-01A 10 11 Out-of-frame Inter-chr q21.32 p12.33 Seq+ 65505 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KITLG-TNNC1 KITLG chr12 88974041 - TNNC1 chr3 52486268 - Exonic hg19 LUSC TCGA-18-3414-01A 5 6 Out-of-frame Inter-chr q21.32 p21.1 Seq+ 65506 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLC1-MARK3 KLC1 chr14 104095831 - MARK3 chr14 103969219 + Exonic hg19 UCEC TCGA-B5-A0JN-01A 16 23 5'UTR-CDS Intra-chr q32.33 q32.32 CAMK:CAMKL Seq+ 65507 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLC3-CLPTM1 KLC3 chr19 45854005 - CLPTM1 chr19 45476344 + Exonic hg19 BLCA TCGA-G2-AA3D-01A 3 3 In-Frame Intra-chr q13.32 q13.32 Seq+ 65508 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLF10-NUBPL KLF10 chr8 103667794 - NUBPL chr14 31995258 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 12 7 CDS-5'UTR Inter-chr q22.3 Tumor suppressor gene Transcription factor q12 Seq+ 65509 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLF11-AC018682.6 KLF11 chr2 10186546 - AC018682.6 chr2 46711383 + Exonic hg19 COAD TCGA-CM-6167-01A 16 8 Out-of-frame Intra-chr p25.1 Transcription factor 65510 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLF12-CAMK2G KLF12 chr13 74518118 - CAMK2G chr10 75577312 - Exonic hg19 SARC TCGA-X6-A7WB-01A 18 18 Out-of-frame Inter-chr q22.1 Transcription factor q22.2 Seq+ 65511 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLF12-UCHL3 KLF12 chr13 74518118 - UCHL3 chr13 76134889 + Exonic hg19 SARC TCGA-SI-AA8C-01A 3 1 In-Frame Intra-chr q22.1 Transcription factor q22.2 Seq+ 65512 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLF3-SCFD2 KLF3 chr4 38691500 - SCFD2 chr4 54011749 - Exonic hg19 BRCA TCGA-BH-A0WA-01A 3 6 Out-of-frame Intra-chr p14 Transcription factor q12 Seq+ 65513 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLF5-PIBF1 KLF5 chr13 73651676 - PIBF1 chr13 73410241 + Exonic hg19 CESC TCGA-EK-A3GN-01A 2 2 Out-of-frame Intra-chr q22.1 Tumor suppressor gene Transcription factor q21.33 Seq+ 65514 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLF5-PIBF1 KLF5 chr13 73638021 - PIBF1 chr13 73590007 + Exonic hg19 ESCA TCGA-LN-A4MQ-01A 41 424 Out-of-frame Intra-chr q22.1 Tumor suppressor gene Transcription factor q21.33 Seq+ 65515 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLF5-PIBF1 KLF5 chr13 73651676 - PIBF1 chr13 73410241 + Exonic hg19 LUSC TCGA-MF-A522-01A 2 2 Out-of-frame Intra-chr q22.1 Tumor suppressor gene Transcription factor q21.33 Seq+ 65516 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLF5-SUPT16H KLF5 chr13 73651676 - SUPT16H chr14 21829491 - Exonic hg19 BLCA TCGA-E7-A5KF-01A 2 13 Out-of-frame Inter-chr q22.1 Tumor suppressor gene Transcription factor q11.2 65517 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLF7-PARD3B KLF7 chr2 208030191 - PARD3B chr2 205829875 + Exonic hg19 LUAD TCGA-78-7536-01A 6 2 In-Frame Intra-chr q33.3 Transcription factor q33.3 Seq+ 65518 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLF7-PARD3B KLF7 chr2 207988498 - PARD3B chr2 205912304 + Exonic hg19 SKCM TCGA-ER-A2NH-06A 4 2 In-Frame Intra-chr q33.3 Transcription factor q33.3 Seq+ 65519 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLF7-RFTN2 KLF7 chr2 208030191 - RFTN2 chr2 198540190 - Exonic hg19 MESO TCGA-UT-A88G-01B 3 2 CDS-5'UTR Intra-chr q33.3 Transcription factor q33.1 65520 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHDC4-CA5A KLHDC4 chr16 87799398 - CA5A chr16 87936126 - Exonic hg19 HNSC TCGA-BA-A4II-01A 4 2 In-Frame Intra-chr q24.2 q24.2 Seq+ 65521 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHDC4-MAF KLHDC4 chr16 87799398 - MAF chr16 79628450 - Exonic hg19 PRAD TCGA-G9-A9S7-01A 11 6 Out-of-frame Intra-chr q24.2 q23.2 Oncogene Transcription factor Seq+ 65522 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHDC4-SLC7A5 KLHDC4 chr16 87782279 - SLC7A5 chr16 87871547 - Exonic hg19 BLCA TCGA-4Z-AA82-01A 21 8 In-Frame Intra-chr q24.2 q24.2 Seq+ 65523 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHDC4-SPG7 KLHDC4 chr16 87782279 - SPG7 chr16 89611056 + Exonic hg19 BRCA TCGA-C8-A1HN-01A 7 10 Out-of-frame Intra-chr q24.2 q24.3 Seq+ 65524 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHDC5-MRPS35 KLHDC5 chr12 27934135 - MRPS35 chr12 27908114 + Exonic hg19 BLCA TCGA-G2-A3IE-01A 23 39 Out-of-frame Intra-chr p11.22 Seq+ 65525 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHDC8B-RABEP1 KLHDC8B chr3 49213918 - RABEP1 chr17 5283828 + Exonic hg19 ACC TCGA-OR-A5JR-01A 2 5 Out-of-frame Inter-chr p21.31 p13.2 65526 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHL1-HNRNPF KLHL1 chr13 70370870 - HNRNPF chr10 43892038 - Exonic hg19 SARC TCGA-PC-A5DK-01A 4 4 CDS-5'UTR Inter-chr q21.33 q11.21 Seq+ 65527 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHL11-MARCH10 KLHL11 chr17 40021079 - 2019_ 3_ 10_ chr17 60879113 - Exonic hg19 SARC TCGA-FX-A3TO-01A 4 2 Out-of-frame Intra-chr q21.2 q23.2 65528 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHL18-HEMK1 KLHL18 chr3 47324584 - HEMK1 chr3 50608362 + Exonic hg19 BLCA TCGA-DK-A3IQ-01A 5 2 CDS-5'UTR Intra-chr p21.31 p21.31 Seq+ 65529 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHL18-NUP210 KLHL18 chr3 47324584 - NUP210 chr3 13441361 - Exonic hg19 MESO TCGA-ZN-A9VW-01A 3 1 Out-of-frame Intra-chr p21.31 p25.1 65530 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHL18-TEX264 KLHL18 chr3 47324584 - TEX264 chr3 51708287 + Exonic hg19 BRCA TCGA-A2-A3KC-01A 15 8 CDS-5'UTR Intra-chr p21.31 p21.2 Seq+ 65531 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHL2-ARHGEF7 KLHL2 chr4 166184511 - ARHGEF7 chr13 111929934 + Exonic hg19 HNSC TCGA-QK-A8ZA-01A 3 2 Out-of-frame Inter-chr q32.3 q34 65532 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHL22-DENND5A KLHL22 chr22 20843272 - DENND5A chr11 9229179 - Exonic hg19 LUSC TCGA-NK-A5CX-01A 7 3 Out-of-frame Inter-chr q11.21 p15.4 Seq+ 65533 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHL22-RANGAP1 KLHL22 chr22 20800730 - RANGAP1 chr22 41652828 - Exonic hg19 KIRP TCGA-P4-A5EB-01A 28 17 In-Frame Intra-chr q11.21 q13.2 Seq+ 65534 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHL22-ZNF74 KLHL22 chr22 20843272 - ZNF74 chr22 20754922 + Exonic hg19 LUSC TCGA-66-2793-01A 20 7 Out-of-frame Intra-chr q11.21 q11.21 Transcription factor Seq+ 65535 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHL24-ATP11B KLHL24 chr3 183390272 - ATP11B chr3 182631649 + Exonic hg19 KIRP TCGA-G7-6793-01A 67 34 In-Frame Intra-chr q27.1 q26.33 Oncogene Seq+ 65536 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHL24-CEP89 KLHL24 chr3 183381430 - CEP89 chr19 33392318 - Exonic hg19 LUSC TCGA-21-1071-01A 9 9 Out-of-frame Inter-chr q27.1 q13.11 Seq+ 65537 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHL24-MARCH7 KLHL24 chr3 183369064 - 2019_ 3_ 7_ chr2 160619391 + Exonic hg19 SARC TCGA-IE-A3OV-01A 43 12 Out-of-frame Inter-chr q27.1 q24.2 Seq+ 65538 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHL24-MCF2L2 KLHL24 chr3 183361330 - MCF2L2 chr3 182948805 - Exonic hg19 LUSC TCGA-56-7223-01A 50 55 5'UTR-CDS Intra-chr q27.1 q27.1 Seq+ 65539 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHL26-C19orf50 KLHL26 chr19 18775253 - C19orf50 chr19 18679212 + Exonic hg19 BRCA TCGA-A2-A0YE-01A 6 5 Out-of-frame Intra-chr p13.11 65540 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHL26-PGPEP1 KLHL26 chr19 18747947 - PGPEP1 chr19 18466705 + Exonic hg19 STAD TCGA-VQ-A8PH-01A 2 8 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 65541 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHL3-C16orf45 KLHL3 chr5 137071322 - C16orf45 chr16 15609162 + Exonic hg19 OV TCGA-13-0924-01A 2 1 Out-of-frame Inter-chr q31.2 Seq+ 65542 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHL32-ROBO1 KLHL32 chr6 97424053 - ROBO1 chr3 78988077 - Exonic hg19 BRCA TCGA-BH-A0HL-01A 2 2 Out-of-frame Inter-chr q16.1 p12.3 Tumor suppressor gene 65543 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHL5-HLA-F KLHL5 chr4 39128477 - HLA-F chr6 29705899 + Exonic hg19 LIHC TCGA-DD-A4NO-01A 32 17 Out-of-frame Inter-chr p14 65544 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHL5-LNX1 KLHL5 chr4 39046716 - LNX1 chr4 54374394 - Exonic hg19 BLCA TCGA-DK-A3X2-01A 2 1 5'UTR-CDS Intra-chr p14 q12 65545 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHL5-SLC16A2 KLHL5 chr4 39046716 - SLC16A2 chrX 73740825 + Exonic hg19 HNSC TCGA-CV-7238-01A 3 5 5'UTR-CDS Inter-chr p14 q13.2 Seq+ 65546 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHL7-DNAH11 KLHL7 chr7 23145765 - DNAH11 chr7 21584624 + Exonic hg19 LUAD TCGA-55-8089-01A 49 41 In-Frame Intra-chr p15.3 p15.3 Seq+ 65547 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLHL7-TMEM106B KLHL7 chr7 23191828 - TMEM106B chr7 12254435 + Exonic hg19 GBM TCGA-14-0736-02A 3 4 5'UTR-5'UTR Intra-chr p15.3 p21.3 Seq+ 65548 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLK2-CCT5 KLK2 chr19 51383822 - CCT5 chr5 10250033 + Exonic hg19 PRAD TCGA-HC-7230-01A 2 4 Out-of-frame Inter-chr q13.33 p15.2 65549 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLK2-ETV1 KLK2 chr19 51376775 - ETV1 chr7 13971374 - Exonic hg19 PRAD TCGA-ZG-A9LY-01A 2029 1808 Out-of-frame Inter-chr q13.33 p21.2 Oncogene Transcription factor KB Seq+ 65550 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLK2-FGFR2 KLK2 chr19 51376775 - FGFR2 chr10 123310973 - Exonic hg19 PRAD TCGA-V1-A9O5-01A 543 408 In-Frame Inter-chr q13.33 q26.13 TK:FGFR Oncogene KB Pub Seq+ 65551 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLK2-FGFR2 KLK2 chr19 51376775 - FGFR2 chr10 123310973 - Exonic hg19 PRAD TCGA-V1-A9O5-06A 1674 1933 In-Frame Inter-chr q13.33 q26.13 TK:FGFR Oncogene KB Pub Seq+ 65552 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLK2-FGFR2 KLK2 chr19 51376775 - FGFR2 chr10 123310973 - Exonic hg19 UVM TCGA-V4-A9EA-01A 5 7 In-Frame Inter-chr q13.33 q26.13 TK:FGFR Oncogene KB Pub Seq+ 65553 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLK2-NDUFV1 KLK2 chr19 51383822 - NDUFV1 chr11 67375697 + Exonic hg19 PRAD TCGA-CH-5753-01A 2 2 Out-of-frame Inter-chr q13.33 q13.2 65554 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLK2-NDUFV1 KLK2 chr19 51383822 - NDUFV1 chr11 67375697 + Exonic hg19 PRAD TCGA-EJ-7793-01A 2 33 Out-of-frame Inter-chr q13.33 q13.2 65555 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLK2-PLAT KLK2 chr19 51383822 - PLAT chr8 42051245 - Exonic hg19 PRAD TCGA-EJ-5526-01A 2 9 Out-of-frame Inter-chr q13.33 p11.21 65556 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLK2-STAT6 KLK2 chr19 51383822 - STAT6 chr12 57496773 - Exonic hg19 PRAD TCGA-EJ-7782-01A 2 7 Out-of-frame Inter-chr q13.33 q13.3 Transcription factor 65557 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLK2-ZNFX1 KLK2 chr19 51383822 - ZNFX1 chr20 47863418 - Exonic hg19 PRAD TCGA-QU-A6IP-01A 2 17 Out-of-frame Inter-chr q13.33 q13.13 65558 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLK4-ZNF827 KLK4 chr19 51409608 - ZNF827 chr4 146859787 - Exonic hg19 PRAD TCGA-HC-8256-01A 2 45 3'UTR-5'UTR Inter-chr q13.41 q31.22 Transcription factor 65559 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLRAQ1-DNAH6 KLRAQ1 chr2 48692781 - DNAH6 chr2 85046429 + Exonic hg19 PRAD TCGA-EJ-7321-01A 43 20 Out-of-frame Intra-chr p11.2 65560 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KLRAQ1-WARS2 KLRAQ1 chr2 48725874 - WARS2 chr1 119619230 - Exonic hg19 BRCA TCGA-BH-A0B2-01A 4 2 Out-of-frame Inter-chr p12 65561 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KNTC1-CCDC53 KNTC1 chr12 123036243 - CCDC53 chr12 102433756 - Exonic hg19 LGG TCGA-DU-A5TP-01A 6 4 In-Frame Intra-chr q24.31 Seq+ 65562 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KNTC1-MLXIP KNTC1 chr12 123100073 - MLXIP chr12 122611803 + Exonic hg19 LUSC TCGA-34-5232-01A 3 2 Out-of-frame Intra-chr q24.31 Transcription factor 65563 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KPNA1-CD86 KPNA1 chr3 122233604 - CD86 chr3 121836895 + Exonic hg19 KIRC TCGA-B0-4841-01A 5 13 5'UTR-CDS Intra-chr q21.1 q13.33 65564 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KPNA1-CHRNA9 KPNA1 chr3 122233604 - CHRNA9 chr4 40350899 + Exonic hg19 CESC TCGA-LP-A5U2-01A 20 17 5'UTR-CDS Inter-chr q21.1 p14 Seq+ 65565 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KPNA1-GMPS KPNA1 chr3 122215284 - GMPS chr3 155637022 + Exonic hg19 LUAD TCGA-78-7147-01A 100 67 In-Frame Intra-chr q21.1 q25.31 Seq+ 65566 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KPNA1-NCK1 KPNA1 chr3 122215284 - NCK1 chr3 136646826 + Exonic hg19 MESO TCGA-XT-AASU-01A 59 53 CDS-5'UTR Intra-chr q21.1 q22.3 Seq+ 65567 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KPNA1-SMC1B KPNA1 chr3 122215284 - SMC1B chr22 45804779 - Exonic hg19 PRAD TCGA-KK-A7AU-01A 8 2 Out-of-frame Inter-chr q21.1 q13.31 65568 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KPNA3-C12orf35 KPNA3 chr13 50306507 - C12orf35 chr12 32145312 + Exonic hg19 LIHC TCGA-BW-A5NP-01A 10 1 Out-of-frame Inter-chr q14.2 65569 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KPNA3-FGF2 KPNA3 chr13 50321085 - FGF2 chr4 123797476 + Exonic hg19 BLCA TCGA-E5-A2PC-01A 131 53 Out-of-frame Inter-chr q14.2 q28.1 Seq+ 65570 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KPNA3-MLNR KPNA3 chr13 50366574 - MLNR chr13 49796176 + Exonic hg19 BLCA TCGA-UY-A8OB-01A 10 1 Out-of-frame Intra-chr q14.2 q14.2 65571 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KPNA3-RP11-47I22.3 KPNA3 chr13 50366574 - RP11-47I22.3 chr14 62117680 + Exonic hg19 BRCA TCGA-BH-A0EE-01A 20 24 Out-of-frame Inter-chr q14.2 65572 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KPNA3-RP11-47I22.4 KPNA3 chr13 50366574 - RP11-47I22.4 chr14 62124323 + Exonic hg19 BRCA TCGA-BH-A0EE-01A 6 8 Out-of-frame Inter-chr q14.2 65573 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KPNA3-SLC7A1 KPNA3 chr13 50285027 - SLC7A1 chr13 30107119 - Exonic hg19 HNSC TCGA-D6-6827-01A 2 2 Out-of-frame Intra-chr q14.2 q12.3 65574 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KPNA3-SPRYD7 KPNA3 chr13 50366574 - SPRYD7 chr13 50495716 - Exonic hg19 BLCA TCGA-GU-A767-01A 6 4 In-Frame Intra-chr q14.2 q14.2 Seq+ 65575 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KPNA3-SPRYD7 KPNA3 chr13 50366574 - SPRYD7 chr13 50505270 - Exonic hg19 UCS TCGA-N6-A4VG-01A 8 6 Out-of-frame Intra-chr q14.2 q14.2 Seq+ 65576 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KPNA3-WDFY2 KPNA3 chr13 50366574 - WDFY2 chr13 52234732 + Exonic hg19 LIHC TCGA-DD-AAW2-01A 2 2 Out-of-frame Intra-chr q14.2 q14.3 65577 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KPNA4-PTPRD KPNA4 chr3 160283002 - PTPRD chr9 9574781 - Exonic hg19 BLCA TCGA-FD-A6TF-01A 5 1 CDS-5'UTR Inter-chr q25.33 Oncogene Tumor suppressor gene 65578 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KPNA6-RHCE KPNA6 chr1 32573735 - RHCE chr1 25697031 - Exonic hg19 HNSC TCGA-DQ-7591-01A 8 20 In-Frame Intra-chr p35.2 p36.11 Seq+ 65579 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KPNA6-TRAIP KPNA6 chr1 32573735 - TRAIP chr3 49885633 - Exonic hg19 SARC TCGA-HS-A5N9-01A 15 44 Out-of-frame Inter-chr p35.2 p21.31 Seq+ 65580 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KPNA6-ZCCHC17 KPNA6 chr1 32573735 - ZCCHC17 chr1 31791956 + Exonic hg19 LUSC TCGA-LA-A7SW-01A 6 6 Out-of-frame Intra-chr p35.2 p35.2 Seq+ 65581 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KPNB1-SKAP1 KPNB1 chr17 45748198 - SKAP1 chr17 46239931 - Exonic hg19 BRCA TCGA-D8-A27G-01A 43 10 Out-of-frame Intra-chr q21.32 q21.32 Seq+ 65582 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRAS-IFLTD1 KRAS chr12 25398208 - IFLTD1 chr12 25656734 - Exonic hg19 OV TCGA-13-1511-01A 4 4 Out-of-frame Intra-chr p12.1 Oncogene Tumor suppressor gene Seq+ 65583 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRAS-RERGL KRAS chr12 25398208 - RERGL chr12 18241890 - Exonic hg19 BRCA TCGA-E2-A1AZ-01A 7 3 Out-of-frame Intra-chr p12.1 Oncogene p12.3 65584 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRBA2-YBX2 KRBA2 chr17 8279218 - YBX2 chr17 7196857 - Exonic hg19 BLCA TCGA-GC-A3YS-01A 2 2 5'UTR-CDS Intra-chr p13.1 p13.1 Transcription factor Seq+ 65585 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRBOX1-C3orf39 KRBOX1 chr3 42861203 - C3orf39 chr3 43123028 - Exonic hg19 BLCA TCGA-BL-A13J-01A 19 3 5'UTR-5'UTR Intra-chr p22.1 65586 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KREMEN1-ENTHD1 KREMEN1 chr22 29494941 - ENTHD1 chr22 40231963 - Exonic hg19 LUAD TCGA-MP-A4SV-01A 5 1 In-Frame Intra-chr q12.1 q13.1 Seq+ 65587 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRI1-CCDC151 KRI1 chr19 10670035 - CCDC151 chr19 11534698 - Exonic hg19 LUAD TCGA-MP-A5C7-01A 64 32 In-Frame Intra-chr p13.2 p13.2 Seq+ 65588 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRIT1-GNGT1 KRIT1 chr7 91866981 - GNGT1 chr7 93536048 + Exonic hg19 GBM TCGA-32-2615-01A 18 46 CDS-5'UTR Intra-chr q21.2 Tumor suppressor gene q21.3 Seq+ 65589 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT1-ANKS1A KRT1 chr12 53068520 - ANKS1A chr6 34977682 + Exonic hg19 HNSC TCGA-CV-6954-01A 2 23 3'UTR-CDS Inter-chr q13.13 p21.31 65590 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT10-ARFGEF2 KRT10 chr17 38974369 - ARFGEF2 chr20 47615777 + Exonic hg19 SKCM TCGA-EB-A1NK-01A 2 99 3'UTR-CDS Inter-chr q21.2 q13.13 65591 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT10-CLASP2 KRT10 chr17 38974369 - CLASP2 chr3 33602368 - Exonic hg19 SKCM TCGA-EB-A24C-01A 2 29 3'UTR-CDS Inter-chr q21.2 p22.3 65592 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT13-AP1G2 KRT13 chr17 39657233 - AP1G2 chr14 24037279 - Exonic hg19 HNSC TCGA-CX-7086-01A 2 13 3'UTR-5'UTR Inter-chr q21.2 q11.2 65593 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT13-DDX21 KRT13 chr17 39657233 - DDX21 chr10 70723858 + Exonic hg19 CESC TCGA-EA-A3QE-01A 2 20 3'UTR-CDS Inter-chr q21.2 q22.1 65594 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT13-FAR1 KRT13 chr17 39657233 - FAR1 chr11 13744912 + Exonic hg19 HNSC TCGA-HD-8224-01A 2 2 3'UTR-CDS Inter-chr q21.2 p15.3 65595 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT13-PLAT KRT13 chr17 39657233 - PLAT chr8 42051245 - Exonic hg19 CESC TCGA-MA-AA43-01A 2 18 3'UTR-5'UTR Inter-chr q21.2 p11.21 65596 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT13-STAT6 KRT13 chr17 39657233 - STAT6 chr12 57496773 - Exonic hg19 CESC TCGA-FU-A5XV-01A 2 62 3'UTR-3'UTR Inter-chr q21.2 q13.3 Transcription factor 65597 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT13-SUPT16H KRT13 chr17 39657233 - SUPT16H chr14 21829491 - Exonic hg19 HNSC TCGA-CN-6012-01A 2 6 3'UTR-CDS Inter-chr q21.2 q11.2 65598 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT13-THSD4 KRT13 chr17 39657233 - THSD4 chr15 72072881 + Exonic hg19 CESC TCGA-EK-A2RC-01A 2 40 3'UTR-3'UTR Inter-chr q21.2 q23 65599 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT14-ARFGEF2 KRT14 chr17 39738531 - ARFGEF2 chr20 47615777 + Exonic hg19 HNSC TCGA-CR-7382-01A 2 2 3'UTR-CDS Inter-chr q21.2 q13.13 65600 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT14-CYP2C18 KRT14 chr17 39738531 - CYP2C18 chr10 96447527 + Exonic hg19 HNSC TCGA-CQ-6229-01A 2 1 3'UTR-CDS Inter-chr q21.2 q23.33 65601 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT14-DSP KRT14 chr17 39738531 - DSP chr6 7575528 + Exonic hg19 CESC TCGA-IR-A3LL-01A 2 1 3'UTR-CDS Inter-chr q21.2 p24.3 Tumor suppressor gene 65602 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT14-SUPT16H KRT14 chr17 39738531 - SUPT16H chr14 21829491 - Exonic hg19 BLCA TCGA-DK-A3WX-01A 2 30 3'UTR-CDS Inter-chr q21.2 q11.2 65603 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT14-SUPT16H KRT14 chr17 39738531 - SUPT16H chr14 21829491 - Exonic hg19 CESC TCGA-FU-A3HY-01A 2 27 3'UTR-CDS Inter-chr q21.2 q11.2 65604 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT14-TYK2 KRT14 chr17 39738531 - TYK2 chr19 10491352 - Exonic hg19 HNSC TCGA-IQ-A61E-01A 2 12 3'UTR-5'UTR Inter-chr q21.2 p13.2 TK:JakA 65605 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT15-BIRC6 KRT15 chr17 39669998 - BIRC6 chr2 32820101 + Exonic hg19 HNSC TCGA-T2-A6X0-01A 2 47 3'UTR-CDS Inter-chr q21.2 p22.3 65606 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT15-PTN KRT15 chr17 39669998 - PTN chr7 136938384 - Exonic hg19 LUSC TCGA-85-A4QR-01A 2 85 3'UTR-CDS Inter-chr q21.2 q33 65607 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT16-CCT5 KRT16 chr17 39766030 - CCT5 chr5 10250033 + Exonic hg19 CESC TCGA-FU-A5XV-01A 2 1 Out-of-frame Inter-chr q21.2 p15.2 65608 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT17-NDUFV1 KRT17 chr17 39775689 - NDUFV1 chr11 67375697 + Exonic hg19 CESC TCGA-EK-A3GJ-01A 2 20 Out-of-frame Inter-chr q21.2 q13.2 65609 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT19-ANKS1A KRT19 chr17 39679869 - ANKS1A chr6 34977682 + Exonic hg19 LUAD TCGA-44-7670-01A 2 2 3'UTR-CDS Inter-chr q21.2 Tumor suppressor gene p21.31 65610 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT19-C7 KRT19 chr17 39679869 - C7 chr5 40954982 + Exonic hg19 MESO TCGA-MQ-A4KX-01A 2 5 3'UTR-CDS Inter-chr q21.2 Tumor suppressor gene p13.1 Tumor suppressor gene 65611 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT19-CCT5 KRT19 chr17 39679869 - CCT5 chr5 10250033 + Exonic hg19 CESC TCGA-EX-A1H5-01A 3 15 3'UTR-5'UTR Inter-chr q21.2 Tumor suppressor gene p15.2 65612 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT19-CLDN7 KRT19 chr17 39679869 - CLDN7 chr17 7166264 - Exonic hg19 HNSC TCGA-CN-4739-01A 2 2 3'UTR-5'UTR Intra-chr q21.2 Tumor suppressor gene p13.1 65613 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT19-COL5A1 KRT19 chr17 39679869 - COL5A1 chr9 137533620 + Exonic hg19 BRCA TCGA-JL-A3YX-01A 2 6 3'UTR-5'UTR Inter-chr q21.2 Tumor suppressor gene q34.3 65614 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT19-CTNND1 KRT19 chr17 39679869 - CTNND1 chr11 57574387 + Exonic hg19 LUSC TCGA-56-8082-01A 3 1 3'UTR-CDS Inter-chr q21.2 Tumor suppressor gene q12.1 Tumor suppressor gene 65615 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT19-CTNND1 KRT19 chr17 39679869 - CTNND1 chr11 57574387 + Exonic hg19 HNSC TCGA-CQ-6225-01A 2 4 3'UTR-CDS Inter-chr q21.2 Tumor suppressor gene q12.1 Tumor suppressor gene 65616 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT19-EIF2AK2 KRT19 chr17 39679869 - EIF2AK2 chr2 37342384 - Exonic hg19 PAAD TCGA-IB-7885-01A 2 10 3'UTR-CDS Inter-chr q21.2 Tumor suppressor gene p22.2 65617 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT19-IKZF3 KRT19 chr17 39684080 - IKZF3 chr17 37944627 - Exonic hg19 STAD TCGA-BR-7197-01A 8 20 Out-of-frame Intra-chr q21.2 Tumor suppressor gene q21.1 Tumor suppressor gene Transcription factor Seq+ 65618 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT19-PFKP KRT19 chr17 39679869 - PFKP chr10 3177928 + Exonic hg19 LUSC TCGA-56-8304-01A 2 11 3'UTR-CDS Inter-chr q21.2 Tumor suppressor gene p15.2 65619 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT19-PLEKHA5 KRT19 chr17 39679869 - PLEKHA5 chr12 19441012 + Exonic hg19 LUSC TCGA-94-A5I4-01A 2 6 3'UTR-3'UTR Inter-chr q21.2 Tumor suppressor gene p12.3 65620 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT19-SLC38A5 KRT19 chr17 39679869 - SLC38A5 chrX 48327824 - Exonic hg19 CESC TCGA-EA-A3HR-01A 2 2 3'UTR-5'UTR Inter-chr q21.2 Tumor suppressor gene p11.23 65621 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT5-ANKS1A KRT5 chr12 52908361 - ANKS1A chr6 34977682 + Exonic hg19 HNSC TCGA-CV-6937-01A 2 9 Out-of-frame Inter-chr q13.13 p21.31 65622 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT5-DSP KRT5 chr12 52908361 - DSP chr6 7575528 + Exonic hg19 CESC TCGA-VS-A8EB-01A 2 1 3'UTR-CDS Inter-chr q13.13 p24.3 Tumor suppressor gene 65623 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT5-FOS KRT5 chr12 52910965 - FOS chr14 75745529 + Exonic hg19 HNSC TCGA-CV-7410-01A 4 1 Out-of-frame Inter-chr q13.13 q24.3 Transcription factor 65624 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT5-HLA-DRA KRT5 chr12 52908359 - HLA-DRA chr6 32407655 + Exonic hg19 HNSC TCGA-DQ-7590-01A 4 1 Out-of-frame Inter-chr q13.13 65625 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT5-MAP7 KRT5 chr12 52908361 - MAP7 chr6 136847121 - Exonic hg19 CESC TCGA-C5-A8ZZ-01A 2 1 Out-of-frame Inter-chr q13.13 q23.3 65626 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT5-PLAT KRT5 chr12 52908359 - PLAT chr8 42051245 - Exonic hg19 CESC TCGA-EA-A5FO-01A 2 5 3'UTR-5'UTR Inter-chr q13.13 p11.21 65627 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT5-TYK2 KRT5 chr12 52908359 - TYK2 chr19 10491352 - Exonic hg19 HNSC TCGA-CV-6933-01A 2 2 3'UTR-5'UTR Inter-chr q13.13 p13.2 TK:JakA 65628 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT6A-CXCR5 KRT6A chr12 52880958 - CXCR5 chr11 118754475 + Exonic hg19 HNSC TCGA-CV-A6JZ-01A 2 38 3'UTR-5'UTR Inter-chr q13.13 q23.3 65629 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT6A-ELK3 KRT6A chr12 52880958 - ELK3 chr12 96588323 + Exonic hg19 CESC TCGA-DG-A2KM-01A 2 9 3'UTR-5'UTR Intra-chr q13.13 q23.1 Transcription factor 65630 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT6A-ERBB3 KRT6A chr12 52880958 - ERBB3 chr12 56492035 + Exonic hg19 HNSC TCGA-DQ-5624-01A 2 2 3'UTR-3'UTR Intra-chr q13.13 q13.2 Oncogene 65631 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT6A-RFWD2 KRT6A chr12 52880958 - RFWD2 chr1 176129420 - Exonic hg19 HNSC TCGA-CV-A461-01A 2 2 3'UTR-CDS Inter-chr q13.13 q25.2 Tumor suppressor gene 65632 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KRT6A-STAT6 KRT6A chr12 52880958 - STAT6 chr12 57496773 - Exonic hg19 CESC TCGA-HM-A4S6-01A 2 10 3'UTR-3'UTR Intra-chr q13.13 q13.3 Transcription factor 65633 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KSR1-EFCAB5 KSR1 chr17 25887482 - EFCAB5 chr17 28295809 + Exonic hg19 LUAD TCGA-MP-A5C7-01A 10 5 5'UTR-5'UTR Intra-chr q11.2 TKL:RAF q11.2 Seq+ 65634 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KSR1-MSI2 KSR1 chr17 25783900 - MSI2 chr17 55478740 + Exonic hg19 BRCA TCGA-E2-A14V-01A 3 10 5'UTR-CDS Intra-chr q11.2 TKL:RAF q22 Seq+ 65635 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KSR1-ODZ1 KSR1 chr17 25877734 - ODZ1 chrX 123695667 - Exonic hg19 LAML TCGA-AB-2920-03B 7 4 5'UTR-CDS Inter-chr q11.2 TKL:RAF 65636 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KSR1-PIPOX KSR1 chr17 25783900 - PIPOX chr17 27371877 + Exonic hg19 BRCA TCGA-OL-A5RZ-01A 7 1 5'UTR-CDS Intra-chr q11.2 TKL:RAF q11.2 65637 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KSR2-CEP290 KSR2 chr12 118198816 - CEP290 chr12 88444210 - Exonic hg19 SARC TCGA-3B-A9HO-01A 6 13 Out-of-frame Intra-chr q24.23 TKL:RAF q21.32 Seq+ 65638 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KSR2-P2RX4 KSR2 chr12 118198816 - P2RX4 chr12 121670217 + Exonic hg19 BRCA TCGA-A2-A0D0-01A 2 3 In-Frame Intra-chr q24.23 TKL:RAF q24.31 Seq+ 65639 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KTN1-ANKS1A KTN1 chr14 56151301 - ANKS1A chr6 34977682 + Exonic hg19 BLCA TCGA-BT-A3PH-01A 2 4 Out-of-frame Inter-chr q22.3 p21.31 65640 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KTN1-CCT5 KTN1 chr14 56151301 - CCT5 chr5 10250033 + Exonic hg19 ACC TCGA-OR-A5K5-01A 2 2 Out-of-frame Inter-chr q22.3 p15.2 65641 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KTN1-DRGX KTN1 chr14 56047072 - DRGX chr10 50594904 - Exonic hg19 BLCA TCGA-DK-A1A7-01A 2 1 5'UTR-CDS Inter-chr q22.3 q11.23 Transcription factor 65642 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq KTN1-PRKCSH KTN1 chr14 56104565 - PRKCSH chr19 11558508 + Exonic hg19 LUAD TCGA-95-A4VN-01A 2 2 In-Frame Inter-chr q22.3 p13.2 65643 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq L2HGDH-LMBRD1 L2HGDH chr14 50760833 - LMBRD1 chr6 70386433 - Exonic hg19 BRCA TCGA-A2-A0EY-01A 30 9 Out-of-frame Inter-chr q21.3 q13 Seq+ 65644 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq L2HGDH-MAP4K5 L2HGDH chr14 50778729 - MAP4K5 chr14 50915550 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 3 1 Out-of-frame Intra-chr q21.3 q22.1 65645 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq L3MBTL2-EFCAB6 L3MBTL2 chr22 41610030 - EFCAB6 chr22 44074043 - Exonic hg19 SKCM TCGA-EB-A5KH-06A 4 8 In-Frame Intra-chr q13.2 q13.31 Seq+ 65646 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq L3MBTL2-MFI2 L3MBTL2 chr22 41617291 - MFI2 chr3 196744161 - Exonic hg19 HNSC TCGA-P3-A5QA-01A 2 1 Out-of-frame Inter-chr q13.2 65647 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq L3MBTL3-WDR37 L3MBTL3 chr6 130343450 - WDR37 chr10 1118056 + Exonic hg19 BLCA TCGA-GC-A3RB-01A 2 1 5'UTR-5'UTR Inter-chr q23.1 Transcription factor p15.3 Seq+ 65648 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq L3MBTL4-LAMA1 L3MBTL4 chr18 6414800 - LAMA1 chr18 6962058 - Exonic hg19 LUAD TCGA-75-6214-01A 2 1 5'UTR-CDS Intra-chr p11.31 Tumor suppressor gene Transcription factor p11.31 Seq+ 65649 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LACE1-ZUFSP LACE1 chr6 108645252 - ZUFSP chr6 116957042 - Exonic hg19 BRCA TCGA-AN-A0AJ-01A 106 126 In-Frame Intra-chr q22.1 Transcription factor Seq+ 65650 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LACTB2-CYP7B1 LACTB2 chr8 71569991 - CYP7B1 chr8 65537096 - Exonic hg19 SKCM TCGA-WE-AAA3-06A 5 4 In-Frame Intra-chr q13.3 q12.3 Seq+ 65651 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA2-C6orf58 LAMA2 chr6 129204502 - C6orf58 chr6 127899831 + Exonic hg19 KICH TCGA-KN-8428-01A 32 26 In-Frame Intra-chr q22.33 q22.33 Seq+ 65652 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA2-GRIK2 LAMA2 chr6 129513998 - GRIK2 chr6 102124498 + Exonic hg19 SARC TCGA-HB-A3YV-01A 27 13 Out-of-frame Intra-chr q22.33 q16.3 Seq+ 65653 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA2-NUP107 LAMA2 chr6 129641800 - NUP107 chr12 69135593 + Exonic hg19 SARC TCGA-3B-A9HS-01A 17 16 In-Frame Inter-chr q22.33 q15 Seq+ 65654 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA2-SLC11A2 LAMA2 chr6 129513998 - SLC11A2 chr12 51404549 - Exonic hg19 SARC TCGA-HB-A3YV-01A 4 5 Out-of-frame Inter-chr q22.33 q13.12 65655 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA2-UQCRB LAMA2 chr6 129691135 - UQCRB chr8 97245455 - Exonic hg19 SARC TCGA-DX-A3M1-01A 28 24 Out-of-frame Inter-chr q22.33 q22.1 Seq+ 65656 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA3-C18orf8 LAMA3 chr18 21294036 - C18orf8 chr18 21095820 + Exonic hg19 LUSC TCGA-43-8115-01A 4 3 In-Frame Intra-chr q11.2 q11.2 Seq+ 65657 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA3-CABLES1 LAMA3 chr18 21269941 - CABLES1 chr18 20768802 + Exonic hg19 LUAD TCGA-69-8453-01A 2 3 Out-of-frame Intra-chr q11.2 q11.2 Tumor suppressor gene Seq+ 65658 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA3-COX8C LAMA3 chr18 21427632 - COX8C chr14 93814374 + Exonic hg19 PRAD TCGA-G9-6329-01A 9 3 Out-of-frame Inter-chr q11.2 Seq+ 65659 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA3-FAM59A LAMA3 chr18 21462009 - FAM59A chr18 29850346 - Exonic hg19 LUAD TCGA-05-5425-01A 145 90 Out-of-frame Intra-chr q11.2 Seq+ 65660 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA3-GNAL LAMA3 chr18 21294036 - GNAL chr18 11753627 + Exonic hg19 LUAD TCGA-44-7670-01A 4 1 Out-of-frame Intra-chr q11.2 p11.21 65661 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA3-OSBPL1A LAMA3 chr18 21513899 - OSBPL1A chr18 21892070 - Exonic hg19 STAD TCGA-IN-A7NU-01A 6 37 In-Frame Intra-chr q11.2 q11.2 Seq+ 65662 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA3-PSMA8 LAMA3 chr18 21294036 - PSMA8 chr18 23759032 + Exonic hg19 BRCA TCGA-BH-A0H7-01A 3 1 In-Frame Intra-chr q11.2 q11.2 Seq+ 65663 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA3-ZNF521 LAMA3 chr18 21529888 - ZNF521 chr18 22807661 - Exonic hg19 LUAD TCGA-75-6214-01A 193 166 In-Frame Intra-chr q11.2 q11.2 Oncogene Transcription factor Seq+ 65664 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA4-TSPAN18 LAMA4 chr6 112496515 - TSPAN18 chr11 44927958 + Exonic hg19 LGG TCGA-TQ-A7RF-01A 5 5 CDS-5'UTR Inter-chr q21 p11.2 Seq+ 65665 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA5-C12orf28 LAMA5 chr20 60937456 - C12orf28 chr12 70272808 + Exonic hg19 BRCA TCGA-A1-A0SJ-01A 36 26 Out-of-frame Inter-chr q13.33 65666 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA5-C20orf151 LAMA5 chr20 60905544 - C20orf151 chr20 60992375 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 30 14 Out-of-frame Intra-chr q13.33 Seq+ 65667 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA5-C20orf151 LAMA5 chr20 60908431 - C20orf151 chr20 60986052 - Exonic hg19 UCEC TCGA-B5-A1MS-01B 14 19 Out-of-frame Intra-chr q13.33 Seq+ 65668 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA5-C20orf151 LAMA5 chr20 60911790 - C20orf151 chr20 60992375 - Exonic hg19 UCEC TCGA-B5-A3S1-01A 33 12 Out-of-frame Intra-chr q13.33 Seq+ 65669 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA5-C20orf151 LAMA5 chr20 60905544 - C20orf151 chr20 60994786 - Exonic hg19 LUSC TCGA-O2-A52N-01A 367 197 CDS-5'UTR Intra-chr q13.33 Seq+ 65670 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA5-CABLES2 LAMA5 chr20 60926760 - CABLES2 chr20 60970070 - Exonic hg19 LUAD TCGA-38-4630-01A 4 4 In-Frame Intra-chr q13.33 q13.33 Seq+ 65671 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA5-CABLES2 LAMA5 chr20 60926760 - CABLES2 chr20 60971648 - Exonic hg19 PAAD TCGA-IB-7644-01A 87 89 In-Frame Intra-chr q13.33 q13.33 Seq+ 65672 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA5-CLCN7 LAMA5 chr20 60900372 - CLCN7 chr16 1509188 - Exonic hg19 READ TCGA-F5-6465-01A 2 3 In-Frame Inter-chr q13.33 p13.3 Seq+ 65673 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA5-CLCN7 LAMA5 chr20 60900372 - CLCN7 chr16 1509188 - Exonic hg19 READ TCGA-G5-6572-01A 3 3 In-Frame Inter-chr q13.33 p13.3 Seq+ 65674 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA5-NCOR2 LAMA5 chr20 60926760 - NCOR2 chr12 124841352 - Exonic hg19 OV TCGA-04-1362-01A 8 4 Out-of-frame Inter-chr q13.33 q24.31 Seq+ 65675 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA5-SEC63 LAMA5 chr20 60884121 - SEC63 chr6 108214782 - Exonic hg19 UCS TCGA-N6-A4VG-01A 2 2 3'UTR-CDS Inter-chr q13.33 q21 65676 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA5-UBN1 LAMA5 chr20 60937456 - UBN1 chr16 4918834 + Exonic hg19 BRCA TCGA-D8-A27F-01A 56 55 In-Frame Inter-chr q13.33 p13.3 Seq+ 65677 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMA5-WFDC2 LAMA5 chr20 60885044 - WFDC2 chr20 44098396 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 2 1 CDS-5'UTR Intra-chr q13.33 q13.12 65678 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMB1-ATXN7L1 LAMB1 chr7 107626467 - ATXN7L1 chr7 105401909 - Exonic hg19 HNSC TCGA-CN-5359-01A 7 5 In-Frame Intra-chr q31.1 q22.3 Seq+ 65679 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMB1-HBP1 LAMB1 chr7 107601651 - HBP1 chr7 106820324 + Exonic hg19 SARC TCGA-SI-A71Q-01A 124 66 In-Frame Intra-chr q31.1 Tumor suppressor gene Transcription factor Seq+ 65680 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMB1-NRCAM LAMB1 chr7 107626467 - NRCAM chr7 107800937 - Exonic hg19 SARC TCGA-X6-A8C6-01A 21 12 In-Frame Intra-chr q31.1 q31.1 Tumor suppressor gene Seq+ 65681 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMB1-PUS7 LAMB1 chr7 107626467 - PUS7 chr7 105098373 - Exonic hg19 HNSC TCGA-BA-6868-01B 298 178 In-Frame Intra-chr q31.1 q22.3 Seq+ 65682 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMB1-TYK2 LAMB1 chr7 107564248 - TYK2 chr19 10491352 - Exonic hg19 SARC TCGA-DX-A1KY-01A 2 1 Out-of-frame Inter-chr q31.1 p13.2 TK:JakA 65683 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMC1-UTRN LAMC1 chr1 183114727 - UTRN chr6 144665237 + Exonic hg19 LUAD TCGA-78-7155-01A 2 12 Out-of-frame Inter-chr q25.3 q24.2 65684 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMC2-NMNAT2 LAMC2 chr1 183155566 - NMNAT2 chr1 183262928 - Exonic hg19 UCEC TCGA-EY-A3QX-01A 21 8 In-Frame Intra-chr q25.3 q25.3 Seq+ 65685 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMC3-EIF2B3 LAMC3 chr9 133928352 - EIF2B3 chr1 45363116 - Exonic hg19 LGG TCGA-HT-A617-01A 2 1 Out-of-frame Inter-chr q34.12 p34.1 65686 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMC3-NPHP3 LAMC3 chr9 133917122 - NPHP3 chr3 132423215 - Exonic hg19 PRAD TCGA-TK-A8OK-01A 4 1 Out-of-frame Inter-chr q34.12 q22.1 65687 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAMP1-CUL4A LAMP1 chr13 113965182 - CUL4A chr13 113917801 + Exonic hg19 HNSC TCGA-CQ-A4C7-01A 75 2 Out-of-frame Intra-chr q34 Oncogene q34 Seq+ 65688 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LANCL2-CHODL LANCL2 chr7 55433922 - CHODL chr21 19628826 + Exonic hg19 LUSC TCGA-O2-A52N-01A 4 3 Out-of-frame Inter-chr p11.2 q21.1 Seq+ 65689 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LANCL2-SEPT14 LANCL2 chr7 55479782 - SEPT14 chr7 55886916 - Exonic hg19 GBM TCGA-06-0211-01B 119 1716 In-Frame Intra-chr p11.2 p11.2 Seq+ 65690 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LANCL2-SEPT14 LANCL2 chr7 55433922 - SEPT14 chr7 55914330 - Exonic hg19 GBM TCGA-28-2513-01A 11 25 In-Frame Intra-chr p11.2 p11.2 Seq+ 65691 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LANCL2-TFDP2 LANCL2 chr7 55469013 - TFDP2 chr3 141682805 - Exonic hg19 BRCA TCGA-A2-A25F-01A 7 18 In-Frame Inter-chr p11.2 q23 Transcription factor Seq+ 65692 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAP3-DDX1 LAP3 chr4 17583437 - DDX1 chr2 15746274 + Exonic hg19 BLCA TCGA-G2-A2EF-01A 145 196 In-Frame Inter-chr p15.32 p24.3 Seq+ 65693 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAPTM4A-NMD3 LAPTM4A chr2 20232411 - NMD3 chr3 160945105 + Exonic hg19 PRAD TCGA-VP-A875-01A 2 4 3'UTR-CDS Inter-chr p24.1 q26.1 65694 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAPTM4A-PUM2 LAPTM4A chr2 20251171 - PUM2 chr2 20527139 - Exonic hg19 STAD TCGA-FP-8631-01A 2 8 CDS-5'UTR Intra-chr p24.1 p24.1 Seq+ 65695 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAPTM4A-SDC1 LAPTM4A chr2 20251171 - SDC1 chr2 20405185 - Exonic hg19 BRCA TCGA-AC-A6IW-01A 136 141 In-Frame Intra-chr p24.1 p24.1 Seq+ 65696 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LAPTM4B-ARMC9 LAPTM4B chr8 98788336 - ARMC9 chr2 232220510 + Exonic hg19 ACC TCGA-OR-A5JP-01A 11 13 Out-of-frame Inter-chr q22.1 q37.1 Seq+ 65697 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LARGE-EIF4ENIF1 LARGE chr22 33960834 - EIF4ENIF1 chr22 31884731 - Exonic hg19 BLCA TCGA-E7-A4IJ-01A 2 1 CDS-5'UTR Intra-chr q12.2 65698 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LARGE-GRAMD4 LARGE chr22 33712071 - GRAMD4 chr22 47033737 + Exonic hg19 TGCT TCGA-2G-AAGP-01A 2 2 Out-of-frame Intra-chr q13.31 65699 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LARGE-KCNJ4 LARGE chr22 34000421 - KCNJ4 chr22 38824176 - Exonic hg19 BLCA TCGA-XF-AAMJ-01A 2 1 CDS-5'UTR Intra-chr q13.1 65700 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LARGE-SLC5A4 LARGE chr22 34252728 - SLC5A4 chr22 32631080 - Exonic hg19 BLCA TCGA-XF-AAN2-01A 2 1 5'UTR-CDS Intra-chr q12.3 65701 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LARGE-SNW1 LARGE chr22 33960834 - SNW1 chr14 78189620 - Exonic hg19 BRCA TCGA-A2-A0YT-01A 25 26 In-Frame Inter-chr q24.3 Seq+ 65702 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LARP1-MAFF LARP1 chr5 154135753 - MAFF chr22 38609830 + Exonic hg19 LGG TCGA-E1-A7Z4-01A 65 49 CDS-5'UTR Inter-chr q33.2 q13.1 Transcription factor Seq+ 65703 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LARP1B-C4orf29 LARP1B chr4 129012667 - C4orf29 chr4 128956917 + Exonic hg19 BLCA TCGA-XF-A9SP-01A 3 1 Out-of-frame Intra-chr q28.2 65704 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LARP1B-SLC25A31 LARP1B chr4 129028468 - SLC25A31 chr4 128665827 + Exonic hg19 STAD TCGA-BR-8590-01A 2 3 In-Frame Intra-chr q28.2 q28.1 Seq+ 65705 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LARP4-HPD LARP4 chr12 50824353 - HPD chr12 122285120 - Exonic hg19 PRAD TCGA-YL-A8HO-01A 4 11 In-Frame Intra-chr q13.12 q24.31 Seq+ 65706 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LARP4-MUCL1 LARP4 chr12 50794811 - MUCL1 chr12 55248900 + Exonic hg19 LUAD TCGA-91-6840-01A 149 110 Out-of-frame Intra-chr q13.12 q13.2 Seq+ 65707 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LARP4-RP11-579D7.1 LARP4 chr12 50794811 - RP11-579D7.1 chr12 49152992 + Exonic hg19 ESCA TCGA-V5-A7RB-01A 3 7 Out-of-frame Intra-chr q13.12 65708 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LARP4-RYR3 LARP4 chr12 50794811 - RYR3 chr15 34028436 + Exonic hg19 BRCA TCGA-BH-A5IZ-01A 8 11 Out-of-frame Inter-chr q13.12 q13.3 Seq+ 65709 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LARP4-SPRYD3 LARP4 chr12 50794811 - SPRYD3 chr12 53471045 - Exonic hg19 CESC TCGA-HM-A6W2-06A 3 3 Out-of-frame Intra-chr q13.12 q13.13 Seq+ 65710 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LARP4-TMBIM6 LARP4 chr12 50794811 - TMBIM6 chr12 50146247 + Exonic hg19 SKCM TCGA-FS-A1Z4-06A 133 137 In-Frame Intra-chr q13.12 q13.12 Seq+ 65711 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LARP4B-C12orf69 LARP4B chr10 882343 - C12orf69 chr12 14959630 - Exonic hg19 LUSC TCGA-22-1012-01A 8 1 CDS-5'UTR Inter-chr p15.3 65712 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LARP4B-PAMR1 LARP4B chr10 909683 - PAMR1 chr11 35515820 - Exonic hg19 SKCM TCGA-FS-A4F4-06A 7 1 In-Frame Inter-chr p15.3 p13 65713 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LARP4B-PFKFB3 LARP4B chr10 909683 - PFKFB3 chr10 6255586 + Exonic hg19 BRCA TCGA-E9-A1R7-01A 2 2 In-Frame Intra-chr p15.3 p15.1 65714 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LARS2-ANO10 LARS2 chr3 45542071 - ANO10 chr3 43408466 - Exonic hg19 DLBC TCGA-FA-8693-01A 24 15 Out-of-frame Intra-chr p21.31 p21.33 Seq+ 65715 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LARS2-SEC22A LARS2 chr3 45500378 - SEC22A chr3 122978371 + Exonic hg19 PRAD TCGA-HC-7233-01A 3 1 In-Frame Intra-chr p21.31 q21.1 65716 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LARS2-TBL1XR1 LARS2 chr3 45461221 - TBL1XR1 chr3 176769514 - Exonic hg19 DLBC TCGA-FA-A4XK-01A 2 2 In-Frame Intra-chr p21.31 q26.32 Seq+ 65717 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LATS1-LACE1 LATS1 chr6 150038985 - LACE1 chr6 108723200 + Exonic hg19 LUSC TCGA-66-2759-01A 68 47 5'UTR-CDS Intra-chr q25.1 AGC:NDR Tumor suppressor gene Seq+ 65718 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LATS2-MYLK LATS2 chr13 21635485 - MYLK chr3 123386034 - Exonic hg19 SARC TCGA-K1-A42X-01A 165 91 5'UTR-CDS Inter-chr q12.11 AGC:NDR Tumor suppressor gene q21.1 Seq+ 65719 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LATS2-MYLK LATS2 chr13 21635485 - MYLK chr3 123386034 - Exonic hg19 SARC TCGA-K1-A42X-02A 111 51 5'UTR-CDS Inter-chr q12.11 AGC:NDR Tumor suppressor gene q21.1 Seq+ 65720 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LBH-FLT4 LBH chr2 30457373 - FLT4 chr5 180058778 - Exonic hg19 SKCM TCGA-D3-A3CF-06A 148 124 Out-of-frame Inter-chr p23.1 q35.3 TK:VEGFR Oncogene Seq+ 65721 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LBP-BPI LBP chr20 36983809 - BPI chr20 36952272 + Exonic hg19 KIRP TCGA-B9-A8YI-01A 2 1 In-Frame Intra-chr q11.23 q11.23 Seq+ 65722 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LBP-BPI LBP chr20 36983809 - BPI chr20 36952272 + Exonic hg19 LIHC TCGA-BC-A8YO-01A 520 415 In-Frame Intra-chr q11.23 q11.23 Seq+ 65723 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LCLAT1-EPHA3 LCLAT1 chr2 30756180 - EPHA3 chr3 89390066 + Exonic hg19 SKCM TCGA-EB-A550-01A 3 1 In-Frame Inter-chr p23.1 p11.1 Oncogene Tumor suppressor gene Seq+ 65724 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LCN2-ZNFX1 LCN2 chr9 130915734 - ZNFX1 chr20 47863418 - Exonic hg19 LUSC TCGA-92-8065-01A 2 21 Out-of-frame Inter-chr q34.11 q13.13 65725 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LCN2-ZNFX1 LCN2 chr9 130915734 - ZNFX1 chr20 47863418 - Exonic hg19 COAD TCGA-AA-A01P-01A 2 8 Out-of-frame Inter-chr q34.11 q13.13 65726 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LCOR-C10orf131 LCOR chr10 98593236 - C10orf131 chr10 97681773 + Exonic hg19 PRAD TCGA-EJ-5524-01A 7 6 5'UTR-CDS Intra-chr q24.1 Transcription factor Seq+ 65727 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LCOR-CPNE8 LCOR chr10 98593236 - CPNE8 chr12 39096723 - Exonic hg19 BRCA TCGA-E2-A1LL-01A 30 24 5'UTR-CDS Inter-chr q24.1 Transcription factor q12 Seq+ 65728 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LCOR-MAP2K6 LCOR chr10 98667504 - MAP2K6 chr17 67521042 + Exonic hg19 BLCA TCGA-DK-AA76-01A 37 10 5'UTR-CDS Inter-chr q24.1 Transcription factor q24.3 STE:STE7 Seq+ 65729 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LCOR-PNLIPRP3 LCOR chr10 98593236 - PNLIPRP3 chr10 118202567 + Exonic hg19 LUAD TCGA-50-5941-01A 3 3 5'UTR-CDS Intra-chr q24.1 Transcription factor q25.3 Seq+ 65730 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LCOR-RBM20 LCOR chr10 98593236 - RBM20 chr10 112540559 + Exonic hg19 LIHC TCGA-NI-A8LF-01A 4 3 5'UTR-CDS Intra-chr q24.1 Transcription factor q25.2 Seq+ 65731 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LCORL-CDKAL1 LCORL chr4 18023221 - CDKAL1 chr6 20955650 + Exonic hg19 BLCA TCGA-E7-A7DV-01A 2 3 In-Frame Inter-chr p15.31 Transcription factor p22.3 Seq+ 65732 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LCP2-SLC34A1 LCP2 chr5 169701305 - SLC34A1 chr5 176820695 + Exonic hg19 SKCM TCGA-EE-A2GJ-06A 34 33 In-Frame Intra-chr q35.1 q35.3 Seq+ 65733 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LDHB-CCT5 LDHB chr12 21788276 - CCT5 chr5 10250033 + Exonic hg19 LGG TCGA-CS-4943-01A 2 23 Out-of-frame Inter-chr p12.1 p15.2 65734 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LDHB-CTNNA2 LDHB chr12 21790005 - CTNNA2 chr2 80620336 + Exonic hg19 UCEC TCGA-AJ-A3QS-01A 77 62 In-Frame Inter-chr p12.1 p12 Tumor suppressor gene Seq+ 65735 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LDHB-PEX1 LDHB chr12 21788276 - PEX1 chr7 92146729 - Exonic hg19 KIRP TCGA-IA-A40Y-01A 2 76 Out-of-frame Inter-chr p12.1 q21.2 65736 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LDLR-C19orf38 LDLR chr19 11211021 - C19orf38 chr19 10968992 + Exonic hg19 LUAD TCGA-55-6972-01A 2 4 In-Frame Intra-chr p13.2 p13.2 Seq+ 65737 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LDLR-CCDC130 LDLR chr19 11200291 - CCDC130 chr19 13842989 + Exonic hg19 ACC TCGA-OR-A5K5-01A 62 29 Out-of-frame Intra-chr p13.2 p13.13 Seq+ 65738 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LDLR-DNM2 LDLR chr19 11200291 - DNM2 chr19 10935733 + Exonic hg19 UCEC TCGA-AJ-A3NH-01A 10 5 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 65739 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LDLR-DNM2 LDLR chr19 11240346 - DNM2 chr19 10935733 + Exonic hg19 HNSC TCGA-CN-5367-01A 27 15 In-Frame Intra-chr p13.2 p13.2 Seq+ 65740 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LDLR-DNM2 LDLR chr19 11231198 - DNM2 chr19 10922940 + Exonic hg19 SKCM TCGA-WE-A8ZT-06A 13 7 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 65741 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LDLR-SMARCA4 LDLR chr19 11234020 - SMARCA4 chr19 11172460 + Exonic hg19 LUAD TCGA-49-AAR4-01A 25 7 Out-of-frame Intra-chr p13.2 p13.2 Oncogene Tumor suppressor gene Seq+ 65742 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LDLR-TNPO2 LDLR chr19 11240346 - TNPO2 chr19 12834179 - Exonic hg19 BRCA TCGA-BH-A1FE-01A 35 5 CDS-5'UTR Intra-chr p13.2 p13.13 Seq+ 65743 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LDLR-TNPO2 LDLR chr19 11234020 - TNPO2 chr19 12817609 - Exonic hg19 SARC TCGA-IE-A6BZ-01A 12 3 In-Frame Intra-chr p13.2 p13.13 Seq+ 65744 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LDLRAD1-FGGY LDLRAD1 chr1 54475955 - FGGY chr1 59922633 + Exonic hg19 BRCA TCGA-E9-A1R7-01A 2 2 Out-of-frame Intra-chr p32.3 p32.1 65745 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LDLRAD3-AC091196.1 LDLRAD3 chr11 35965694 - AC091196.1 chr11 1502115 - Exonic hg19 SARC TCGA-DX-A3LT-01A 65 14 Out-of-frame Intra-chr p13 65746 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LDLRAD3-CD44 LDLRAD3 chr11 35965694 - CD44 chr11 35198122 + Exonic hg19 BRCA TCGA-E9-A22G-01A 9 34 In-Frame Intra-chr p13 p13 Oncogene Tumor suppressor gene Seq+ 65747 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LDLRAD3-DEPDC7 LDLRAD3 chr11 36120011 - DEPDC7 chr11 33054808 + Exonic hg19 SARC TCGA-DX-A8BU-01A 11 5 In-Frame Intra-chr p13 p13 Seq+ 65748 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LDLRAD3-ELP4 LDLRAD3 chr11 35965694 - ELP4 chr11 31804941 + Exonic hg19 BRCA TCGA-D8-A142-01A 11 28 Out-of-frame Intra-chr p13 p13 Seq+ 65749 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LDLRAD3-PAMR1 LDLRAD3 chr11 35965694 - PAMR1 chr11 35463241 - Exonic hg19 BLCA TCGA-XF-AAN7-01A 4 5 In-Frame Intra-chr p13 p13 Seq+ 65750 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LDLRAD3-PHF21A LDLRAD3 chr11 36057799 - PHF21A chr11 46113774 - Exonic hg19 SKCM TCGA-FS-A4F4-06A 8 1 CDS-5'UTR Intra-chr p13 p11.2 Transcription factor 65751 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LDLRAD3-SNCB LDLRAD3 chr11 36120011 - SNCB chr5 176053762 - Exonic hg19 LUSC TCGA-85-A50M-01A 26 6 In-Frame Inter-chr p13 q35.2 Seq+ 65752 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LDLRAD3-TM7SF3 LDLRAD3 chr11 36120011 - TM7SF3 chr12 27156323 - Exonic hg19 LUAD TCGA-64-1681-01A 2 4 In-Frame Inter-chr p13 p11.23 65753 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LDLRAD3-TRIM44 LDLRAD3 chr11 36120011 - TRIM44 chr11 35827908 + Exonic hg19 LUAD TCGA-50-6592-01A 5 3 Out-of-frame Intra-chr p13 p13 Seq+ 65754 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LDLRAD3-TRIM44 LDLRAD3 chr11 36057799 - TRIM44 chr11 35827908 + Exonic hg19 SKCM TCGA-FR-A726-01A 88 48 Out-of-frame Intra-chr p13 p13 Seq+ 65755 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LDLRAD3-VWA5B2 LDLRAD3 chr11 36120011 - VWA5B2 chr3 183952419 + Exonic hg19 SKCM TCGA-GN-A8LL-06A 6 15 In-Frame Inter-chr p13 q27.1 Seq+ 65756 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LDLRAP1-TMEM57 LDLRAP1 chr1 25870277 - TMEM57 chr1 25824755 + Exonic hg19 BLCA TCGA-XF-A9SZ-01A 44 18 In-Frame Intra-chr p36.11 p36.11 Seq+ 65757 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LEMD3-KCNC2 LEMD3 chr12 65612399 - KCNC2 chr12 75445097 - Exonic hg19 SARC TCGA-DX-AB2F-01A 58 34 In-Frame Intra-chr q14.3 q21.1 Seq+ 65758 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LEMD3-LYZ LEMD3 chr12 65564898 - LYZ chr12 69743888 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 86 60 In-Frame Intra-chr q14.3 q15 Seq+ 65759 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LEMD3-LYZ LEMD3 chr12 65564898 - LYZ chr12 69743888 + Exonic hg19 SARC TCGA-DX-A6BE-01A 59 112 In-Frame Intra-chr q14.3 q15 Seq+ 65760 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LEMD3-RASSF6 LEMD3 chr12 65637249 - RASSF6 chr4 74459310 - Exonic hg19 BRCA TCGA-3C-AAAU-01A 4 4 Out-of-frame Inter-chr q14.3 q13.3 65761 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LEMD3-TSPAN8 LEMD3 chr12 65564898 - TSPAN8 chr12 71676599 - Exonic hg19 HNSC TCGA-UF-A7JH-01A 6 1 Out-of-frame Intra-chr q14.3 q21.1 Seq+ 65762 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LEMD3-XPOT LEMD3 chr12 65612399 - XPOT chr12 64833024 + Exonic hg19 BRCA TCGA-C8-A1HN-01A 43 45 In-Frame Intra-chr q14.3 q14.2 Seq+ 65763 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LENG1-NIT2 LENG1 chr19 54662020 - NIT2 chr3 100059917 + Exonic hg19 HNSC TCGA-QK-A652-01A 22 14 Out-of-frame Inter-chr q12.2 Tumor suppressor gene Seq+ 65764 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LENG8-C1orf86 LENG8 chr19 54969700 - C1orf86 chr1 2125572 - Exonic hg19 READ TCGA-CI-6622-01A 2 2 In-Frame Inter-chr 65765 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LENG8-SIPA1L3 LENG8 chr19 54969700 - SIPA1L3 chr19 38631824 + Exonic hg19 BRCA TCGA-UL-AAZ6-01A 4 10 In-Frame Intra-chr q13.13 Seq+ 65766 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LEO1-FBN1 LEO1 chr15 52263885 - FBN1 chr15 48830005 - Exonic hg19 PRAD TCGA-EJ-7783-01A 9 4 In-Frame Intra-chr q21.2 q21.1 Seq+ 65767 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LEPR-MEF2D LEPR chr1 66070920 - MEF2D chr1 156438812 - Exonic hg19 ESCA TCGA-2H-A9GH-01A 2 8 In-Frame Intra-chr p31.3 q22 Transcription factor Seq+ 65768 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LEPRE1-ERI3 LEPRE1 chr1 43227994 - ERI3 chr1 44687312 - Exonic hg19 LUAD TCGA-55-6982-01A 28 16 Out-of-frame Intra-chr p34.1 Seq+ 65769 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LEPREL1-TP63 LEPREL1 chr3 189838041 - TP63 chr3 189526061 + Exonic hg19 LGG TCGA-CS-4942-01A 3 2 In-Frame Intra-chr q28 Tumor suppressor gene Transcription factor 65770 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LEPREL2-CCT5 LEPREL2 chr12 6949010 - CCT5 chr5 10250033 + Exonic hg19 SARC TCGA-IW-A3M5-01A 2 43 Out-of-frame Inter-chr p15.2 65771 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LEPREL4-ACLY LEPREL4 chr17 39963048 - ACLY chr17 40030218 - Exonic hg19 UCEC TCGA-D1-A3JQ-01A 4 2 In-Frame Intra-chr q21.2 65772 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LETM1-MXD4 LETM1 chr4 1838156 - MXD4 chr4 2259738 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 14 5 Out-of-frame Intra-chr p16.3 p16.3 Transcription factor Seq+ 65773 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LETM2-ERCC2 LETM2 chr8 38262024 - ERCC2 chr19 45872405 - Exonic hg19 LUSC TCGA-85-A53L-01A 2 1 In-Frame Inter-chr p11.23 q13.32 Oncogene Seq+ 65774 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LETMD1-LARP4 LETMD1 chr12 51445990 - LARP4 chr12 50847243 + Exonic hg19 BLCA TCGA-UY-A9PH-01A 4 3 In-Frame Intra-chr q13.12 q13.12 Seq+ 65775 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LGALS12-PLAC9 LGALS12 chr11 63277973 - PLAC9 chr10 81903979 + Exonic hg19 BRCA TCGA-AN-A0AS-01A 5 2 In-Frame Inter-chr q12.3 q22.3 Seq+ 65776 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LGALS13-PTPRH LGALS13 chr19 40096028 - PTPRH chr19 55699536 - Exonic hg19 LGG TCGA-TM-A84B-01A 8 2 Out-of-frame Intra-chr q13.2 q13.42 Seq+ 65777 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LGALS2-SEZ6L LGALS2 chr22 37975907 - SEZ6L chr22 26773639 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 3 1 Out-of-frame Intra-chr q13.1 q12.1 65778 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LGALS3BP-CLSPN LGALS3BP chr17 76967338 - CLSPN chr1 36214444 - Exonic hg19 CESC TCGA-VS-A9UO-01A 2 8 Out-of-frame Inter-chr q25.3 p34.3 65779 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LGALS3BP-ELK3 LGALS3BP chr17 76967338 - ELK3 chr12 96588323 + Exonic hg19 LUAD TCGA-99-7458-01A 2 11 Out-of-frame Inter-chr q25.3 q23.1 Transcription factor 65780 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LGALS8-EDARADD LGALS8 chr1 236681584 - EDARADD chr1 236645567 + Exonic hg19 BRCA TCGA-BH-A203-01A 7 6 5'UTR-CDS Intra-chr q43 q42.3 Seq+ 65781 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LGALS8-EDARADD LGALS8 chr1 236708215 - EDARADD chr1 236645567 + Exonic hg19 BLCA TCGA-DK-AA6P-01A 3 5 Out-of-frame Intra-chr q43 q42.3 Seq+ 65782 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LGALS8-RHBG LGALS8 chr1 236689415 - RHBG chr1 156344398 + Exonic hg19 BLCA TCGA-FD-A3B4-01A 13 4 CDS-5'UTR Intra-chr q43 q22 Seq+ 65783 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LGALS8-TRIM67 LGALS8 chr1 236689415 - TRIM67 chr1 231333117 + Exonic hg19 BRCA TCGA-E2-A15M-01A 7 5 In-Frame Intra-chr q43 q42.2 Seq+ 65784 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LGR5-CNOT2 LGR5 chr12 71928966 - CNOT2 chr12 70747609 + Exonic hg19 BLCA TCGA-ZF-AA4U-01A 36 37 Out-of-frame Intra-chr q21.1 q15 Seq+ 65785 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LGR5-FAM19A2 LGR5 chr12 71928966 - FAM19A2 chr12 62261207 - Exonic hg19 SARC TCGA-SG-A6Z7-01A 11 17 CDS-5'UTR Intra-chr q21.1 q14.1 Seq+ 65786 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LGR5-PPFIA2 LGR5 chr12 71928966 - PPFIA2 chr12 81851645 - Exonic hg19 SARC TCGA-DX-A7EI-01A 4 2 Out-of-frame Intra-chr q21.1 q21.31 Seq+ 65787 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LGR5-PTPRR LGR5 chr12 71898465 - PTPRR chr12 71286757 - Exonic hg19 BLCA TCGA-ZF-AA4U-01A 5 2 Out-of-frame Intra-chr q21.1 q15 Seq+ 65788 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LGR6-GPR37L1 LGR6 chr1 202163329 - GPR37L1 chr1 202096869 + Exonic hg19 UCEC TCGA-A5-A7WK-01A 5 7 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 65789 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LGR6-GPR37L1 LGR6 chr1 202163329 - GPR37L1 chr1 202096869 + Exonic hg19 BRCA TCGA-BH-A0AV-01A 3 1 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 65790 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LGR6-GPR37L1 LGR6 chr1 202205121 - GPR37L1 chr1 202096869 + Exonic hg19 OV TCGA-VG-A8LO-01A 26 169 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 65791 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LGR6-NAV1 LGR6 chr1 202205121 - NAV1 chr1 201749549 + Exonic hg19 UCEC TCGA-AJ-A3BF-01A 2 3 In-Frame Intra-chr q32.1 q32.1 Seq+ 65792 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LHFPL2-CSNK1A1 LHFPL2 chr5 77860636 - CSNK1A1 chr5 148904734 - Exonic hg19 LGG TCGA-HT-A614-01A 6 2 5'UTR-CDS Intra-chr q14.1 q32 Tumor suppressor gene Seq+ 65793 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LHFPL2-HIST1H2AC LHFPL2 chr5 77928087 - HIST1H2AC chr6 26138282 + Exonic hg19 KIRC TCGA-CJ-5681-01A 38 24 5'UTR-3'UTR Inter-chr q14.1 p22.2 Seq+ 65794 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LHFPL2-PTPRK LHFPL2 chr5 77805607 - PTPRK chr6 128411137 - Exonic hg19 READ TCGA-EI-7002-01A 45 11 In-Frame Inter-chr q14.1 Tumor suppressor gene Seq+ 65795 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LHFPL3-EEA1 LHFPL3 chr7 104549001 - EEA1 chr12 93229203 - Exonic hg19 LGG TCGA-CS-5396-01A 2 2 Out-of-frame Inter-chr q22.2 q22 Transcription factor 65796 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LHPP-FANK1 LHPP chr10 126205840 - FANK1 chr10 127668730 + Exonic hg19 GBM TCGA-02-2483-01A 12 33 Out-of-frame Intra-chr q26.13 q26.2 Seq+ 65797 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LHPP-TMCO7 LHPP chr10 126172895 - TMCO7 chr16 69056731 + Exonic hg19 HNSC TCGA-CV-6948-01A 10 1 In-Frame Inter-chr q26.13 65798 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIFR-BCAS3 LIFR chr5 38496484 - BCAS3 chr17 59445688 + Exonic hg19 LUSC TCGA-68-8250-01A 65 50 In-Frame Inter-chr p13.1 Oncogene Tumor suppressor gene q23.2 Seq+ 65799 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIFR-C9 LIFR chr5 38493708 - C9 chr5 39316131 - Exonic hg19 BRCA TCGA-A7-A26G-01A 9 12 Out-of-frame Intra-chr p13.1 Oncogene Tumor suppressor gene p13.1 Seq+ 65800 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIFR-PNPLA8 LIFR chr5 38556436 - PNPLA8 chr7 108161965 - Exonic hg19 LGG TCGA-DU-7006-01A 2 7 5'UTR-5'UTR Inter-chr p13.1 Oncogene Tumor suppressor gene q31.1 Seq+ 65801 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIG1-AC008687.1 LIG1 chr19 48664629 - AC008687.1 chr19 49567119 - Exonic hg19 SKCM TCGA-D3-A3CC-06A 7 1 Out-of-frame Intra-chr q13.33 Tumor suppressor gene q13.33 65802 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIG3-C19orf50 LIG3 chr17 33313150 - C19orf50 chr19 18672846 + Exonic hg19 BRCA TCGA-AR-A0TT-01A 5 1 Out-of-frame Inter-chr q12 Tumor suppressor gene 65803 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIG3-HAP1 LIG3 chr17 33318133 - HAP1 chr17 39874278 - Exonic hg19 BRCA TCGA-OL-A6VO-01A 2 5 Out-of-frame Intra-chr q12 Tumor suppressor gene q21.2 65804 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIG3-ZFAT LIG3 chr17 33321450 - ZFAT chr8 135490964 - Exonic hg19 BRCA TCGA-E9-A1RF-01A 8 3 In-Frame Inter-chr q12 Tumor suppressor gene q24.22 Transcription factor Seq+ 65805 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIMA1-ANO6 LIMA1 chr12 50642416 - ANO6 chr12 45695797 + Exonic hg19 UCEC TCGA-AJ-A3NF-01A 4 1 Out-of-frame Intra-chr q13.12 Tumor suppressor gene q12 Seq+ 65806 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIMA1-TAOK3 LIMA1 chr12 50642416 - TAOK3 chr12 118682770 - Exonic hg19 BLCA TCGA-CF-A3MI-01A 2 4 Out-of-frame Intra-chr q13.12 Tumor suppressor gene q24.23 65807 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIMA1-TRAPPC9 LIMA1 chr12 50642416 - TRAPPC9 chr8 140999044 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 6 6 In-Frame Inter-chr q13.12 Tumor suppressor gene q24.3 Seq+ 65808 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIMCH1-AC130352.1 LIMCH1 chr4 41361820 - AC130352.1 chr8 12388452 + Exonic hg19 LUAD TCGA-50-7109-01A 4 7 Out-of-frame Inter-chr p13 p23.1 65809 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIMCH1-APBB2 LIMCH1 chr4 41526495 - APBB2 chr4 41102767 - Exonic hg19 BRCA TCGA-D8-A1X5-01A 8 9 5'UTR-5'UTR Intra-chr p13 p13 Seq+ 65810 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIMCH1-CWH43 LIMCH1 chr4 41526495 - CWH43 chr4 49030646 + Exonic hg19 BLCA TCGA-CU-A5W6-01A 9 11 In-Frame Intra-chr p13 p11 Seq+ 65811 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIMCH1-DNM1L LIMCH1 chr4 41702059 - DNM1L chr12 32905677 + Exonic hg19 PRAD TCGA-EJ-7793-01A 7 4 Out-of-frame Inter-chr p13 p11.21 Seq+ 65812 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIMCH1-OCIAD2 LIMCH1 chr4 41362953 - OCIAD2 chr4 48906628 - Exonic hg19 LUSC TCGA-22-A5C4-01A 120 103 5'UTR-5'UTR Intra-chr p13 p11 Seq+ 65813 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIMCH1-UCHL1 LIMCH1 chr4 41362953 - UCHL1 chr4 41265242 + Exonic hg19 BLCA TCGA-2F-A9KW-01A 257 189 In-Frame Intra-chr p13 p13 Tumor suppressor gene Seq+ 65814 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIMCH1-UCHL1 LIMCH1 chr4 41526495 - UCHL1 chr4 41258610 + Exonic hg19 UCEC TCGA-A5-A7WK-01A 29 50 Out-of-frame Intra-chr p13 p13 Tumor suppressor gene Seq+ 65815 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIMCH1-UCHL1 LIMCH1 chr4 41526495 - UCHL1 chr4 41258610 + Exonic hg19 PRAD TCGA-EJ-A46G-01A 2 5 Out-of-frame Intra-chr p13 p13 Tumor suppressor gene Seq+ 65816 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIMD1-LARS2 LIMD1 chr3 45637779 - LARS2 chr3 45488383 + Exonic hg19 LUSC TCGA-68-8251-01A 2 2 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 65817 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIMD1-LARS2 LIMD1 chr3 45707209 - LARS2 chr3 45565489 + Exonic hg19 LUAD TCGA-78-7147-01A 15 6 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 65818 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIMD1-LARS2 LIMD1 chr3 45637779 - LARS2 chr3 45557586 + Exonic hg19 STAD TCGA-BR-4357-01A 3 5 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 65819 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIMK1-GNAT3 LIMK1 chr7 73530288 - GNAT3 chr7 80123963 - Exonic hg19 SARC TCGA-X6-A8C6-01A 4 7 In-Frame Intra-chr q11.23 TKL:LISK q21.11 Seq+ 65820 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIMK2-ATXN10 LIMK2 chr22 31654412 - ATXN10 chr22 46202839 + Exonic hg19 HNSC TCGA-CV-6941-01A 15 7 In-Frame Intra-chr q12.2 TKL:LISK q13.31 Seq+ 65821 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIMK2-CDC45 LIMK2 chr22 31664186 - CDC45 chr22 19504050 + Exonic hg19 BLCA TCGA-DK-A3IN-01A 37 44 In-Frame Intra-chr q12.2 TKL:LISK q11.21 Seq+ 65822 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIMK2-MED15 LIMK2 chr22 31621805 - MED15 chr22 20891404 + Exonic hg19 THYM TCGA-XM-A8R9-01A 6 6 In-Frame Intra-chr q12.2 TKL:LISK q11.21 Seq+ 65823 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIMK2-OSBP2 LIMK2 chr22 31621805 - OSBP2 chr22 31266416 + Exonic hg19 BRCA TCGA-A7-A13D-01A 3 4 Out-of-frame Intra-chr q12.2 TKL:LISK q12.2 Seq+ 65824 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIMK2-RUFY1 LIMK2 chr22 31621805 - RUFY1 chr5 179007948 + Exonic hg19 BRCA TCGA-A8-A07O-01A 6 9 In-Frame Inter-chr q12.2 TKL:LISK Seq+ 65825 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIN28A-CD52 LIN28A chr1 26738073 - CD52 chr1 26646662 + Exonic hg19 TGCT TCGA-2G-AAFV-01A 18 11 In-Frame Intra-chr p36.11 Transcription factor p36.11 Seq+ 65826 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIN52-C14orf45 LIN52 chr14 74567941 - C14orf45 chr14 74522287 + Exonic hg19 BRCA TCGA-AR-A24L-01A 2 3 Out-of-frame Intra-chr q24.3 65827 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIN52-SYNE2 LIN52 chr14 74562688 - SYNE2 chr14 64675476 + Exonic hg19 LUAD TCGA-97-7937-01A 16 3 In-Frame Intra-chr q24.3 q23.2 Seq+ 65828 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIN7A-GRIP1 LIN7A chr12 81283030 - GRIP1 chr12 66859202 - Exonic hg19 SARC TCGA-DX-A1KY-01A 15 3 Out-of-frame Intra-chr q21.31 q14.3 Seq+ 65829 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIN7A-NUP107 LIN7A chr12 81283030 - NUP107 chr12 69135593 + Exonic hg19 SARC TCGA-3B-A9HO-01A 10 6 In-Frame Intra-chr q21.31 q15 65830 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIN7A-PPP1R12A LIN7A chr12 81331420 - PPP1R12A chr12 80328731 - Exonic hg19 SARC TCGA-3B-A9HY-01A 2 2 CDS-5'UTR Intra-chr q21.31 q21.31 65831 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIN7A-TMEM132D LIN7A chr12 81283030 - TMEM132D chr12 129569247 - Exonic hg19 SARC TCGA-3B-A9HO-01A 10 5 In-Frame Intra-chr q21.31 q24.33 65832 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIN7A-TRHDE LIN7A chr12 81331420 - TRHDE chr12 72680461 + Exonic hg19 BRCA TCGA-A8-A08F-01A 2 5 Out-of-frame Intra-chr q21.31 q21.1 Seq+ 65833 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIN9-KDM5B LIN9 chr1 226465476 - KDM5B chr1 202746222 - Exonic hg19 LGG TCGA-CS-5395-01A 11 13 Out-of-frame Intra-chr q42.12 Tumor suppressor gene q32.1 Transcription factor Seq+ 65834 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LINGO2-TLN1 LINGO2 chr9 28475938 - TLN1 chr9 35708481 - Exonic hg19 LUSC TCGA-85-A50M-01A 4 5 5'UTR-CDS Intra-chr p21.1 p13.3 Seq+ 65835 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIPA-TMEM132A LIPA chr10 91005433 - TMEM132A chr11 60694676 + Exonic hg19 BLCA TCGA-FD-A62N-01A 16 4 In-Frame Inter-chr q23.31 q12.2 Seq+ 65836 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIPC-CCNA2 LIPC chr15 58703017 - CCNA2 chr4 122742246 - Exonic hg19 LIHC TCGA-GJ-A6C0-01A 10 5 5'UTR-CDS Inter-chr q21.3 q27 Seq+ 65837 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIPC-TCF12 LIPC chr15 58724319 - TCF12 chr15 57458600 + Exonic hg19 LIHC TCGA-BD-A3ER-01A 3 2 In-Frame Intra-chr q21.3 q21.3 Oncogene Transcription factor Seq+ 65838 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIPF-CLCN3 LIPF chr10 90438568 - CLCN3 chr4 170623929 + Exonic hg19 STAD TCGA-BR-8485-01A 2 1 Out-of-frame Inter-chr q23.31 q33 65839 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIPG-UCMA LIPG chr18 47095918 - UCMA chr10 13275800 - Exonic hg19 BLCA TCGA-ZF-AA4T-01A 27 15 In-Frame Inter-chr q21.1 p13 Seq+ 65840 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LIPN-MINPP1 LIPN chr10 90530748 - MINPP1 chr10 89311839 + Exonic hg19 LGG TCGA-E1-A7YN-01A 5 2 Out-of-frame Intra-chr q23.31 q23.2 Seq+ 65841 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LLGL1-ALKBH5 LLGL1 chr17 18136116 - ALKBH5 chr17 18110129 + Exonic hg19 THCA TCGA-FY-A40L-01A 26 13 In-Frame Intra-chr Tumor suppressor gene p11.2 Seq+ 65842 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LLGL1-TLN2 LLGL1 chr17 18141923 - TLN2 chr15 63014552 + Exonic hg19 SARC TCGA-DX-A6YZ-01A 2 3 Out-of-frame Inter-chr Tumor suppressor gene q22.2 65843 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LLGL2-CPNE4 LLGL2 chr17 73559887 - CPNE4 chr3 131759165 - Exonic hg19 PRAD TCGA-KK-A8IC-01A 9 3 Out-of-frame Inter-chr q25.1 q22.1 Seq+ 65844 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LLGL2-EXOC7 LLGL2 chr17 73521906 - EXOC7 chr17 74083801 - Exonic hg19 BLCA TCGA-E7-A5KE-01A 5 9 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 65845 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMAN1-NBEAL1 LMAN1 chr18 57013151 - NBEAL1 chr2 204090846 + Exonic hg19 SARC TCGA-DX-AB32-01A 306 287 CDS-3'UTR Inter-chr q21.32 q33.2 Seq+ 65846 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMAN2-DBN1 LMAN2 chr5 176761285 - DBN1 chr5 176895221 - Exonic hg19 KIRP TCGA-G7-6793-01A 15 18 In-Frame Intra-chr q35.3 q35.3 Seq+ 65847 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMAN2-DOCK2 LMAN2 chr5 176778174 - DOCK2 chr5 169174400 + Exonic hg19 SKCM TCGA-ER-A19J-06A 4 5 Out-of-frame Intra-chr q35.3 q35.1 Seq+ 65848 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMAN2-F12 LMAN2 chr5 176761285 - F12 chr5 176831091 - Exonic hg19 LUAD TCGA-55-8299-01A 39 61 In-Frame Intra-chr q35.3 q35.3 Seq+ 65849 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMAN2L-FAM178B LMAN2L chr2 97400146 - FAM178B chr2 97595057 - Exonic hg19 HNSC TCGA-CV-6936-01A 22 5 In-Frame Intra-chr q11.2 q11.2 Seq+ 65850 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMAN2L-FAM178B LMAN2L chr2 97399256 - FAM178B chr2 97544230 - Exonic hg19 CESC TCGA-EA-A439-01A 11 7 In-Frame Intra-chr q11.2 q11.2 Seq+ 65851 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMAN2L-FER1L5 LMAN2L chr2 97399256 - FER1L5 chr2 97370205 + Exonic hg19 LUSC TCGA-66-2787-01A 2 2 In-Frame Intra-chr q11.2 q11.2 Seq+ 65852 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMAN2L-MRPS5 LMAN2L chr2 97399256 - MRPS5 chr2 95774153 - Exonic hg19 BRCA TCGA-LL-A7T0-01A 5 3 Out-of-frame Intra-chr q11.2 q11.1 Seq+ 65853 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMBR1-EPHA1 LMBR1 chr7 156589083 - EPHA1 chr7 143098698 - Exonic hg19 BRCA TCGA-AR-A24Q-01A 2 1 In-Frame Intra-chr q36.3 q35 Tumor suppressor gene Seq+ 65854 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMBR1-KIAA0825 LMBR1 chr7 156589083 - KIAA0825 chr5 93872832 - Exonic hg19 SKCM TCGA-EE-A3AG-06A 7 2 CDS-5'UTR Inter-chr q36.3 q15 Seq+ 65855 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMBR1-PRSS1 LMBR1 chr7 156589083 - PRSS1 chr7 142460719 + Exonic hg19 LIHC TCGA-DD-AACL-01A 2 6 In-Frame Intra-chr q36.3 65856 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMBR1-PTPRN2 LMBR1 chr7 156589083 - PTPRN2 chr7 157341713 - Exonic hg19 BRCA TCGA-A2-A0D2-01A 100 64 Out-of-frame Intra-chr q36.3 q36.3 Seq+ 65857 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMBR1-PTPRN2 LMBR1 chr7 156516806 - PTPRN2 chr7 157997965 - Exonic hg19 BRCA TCGA-AR-A24K-01A 54 59 In-Frame Intra-chr q36.3 q36.3 Seq+ 65858 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMBR1-PTPRN2 LMBR1 chr7 156549087 - PTPRN2 chr7 157396767 - Exonic hg19 PRAD TCGA-EJ-A8FU-01A 29 16 In-Frame Intra-chr q36.3 q36.3 Seq+ 65859 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMBR1-PTPRN2 LMBR1 chr7 156516806 - PTPRN2 chr7 157691429 - Exonic hg19 OV TCGA-VG-A8LO-01A 7 49 In-Frame Intra-chr q36.3 q36.3 Seq+ 65860 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMBR1-TPRG1 LMBR1 chr7 156589083 - TPRG1 chr3 188956522 + Exonic hg19 BRCA TCGA-C8-A1HN-01A 2 4 Out-of-frame Inter-chr q36.3 q28 Seq+ 65861 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMBR1-UBE3C LMBR1 chr7 156685622 - UBE3C chr7 156979528 + Exonic hg19 SARC TCGA-DX-A6Z0-01A 3 2 In-Frame Intra-chr q36.3 q36.3 65862 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMBR1L-KCNK6 LMBR1L chr12 49504267 - KCNK6 chr19 38817233 + Exonic hg19 BLCA TCGA-CU-A0YN-01A 56 53 Out-of-frame Inter-chr q13.12 q13.2 Seq+ 65863 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMBR1L-VDR LMBR1L chr12 49504267 - VDR chr12 48240591 - Exonic hg19 LUAD TCGA-55-A493-01A 2 1 Out-of-frame Intra-chr q13.12 q13.11 Tumor suppressor gene Transcription factor 65864 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMBRD1-COL9A1 LMBRD1 chr6 70490386 - COL9A1 chr6 71004266 - Exonic hg19 LUSC TCGA-33-AASB-01A 4 1 Out-of-frame Intra-chr q13 q13 65865 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMBRD1-EYS LMBRD1 chr6 70490386 - EYS chr6 65767620 - Exonic hg19 BRCA TCGA-C8-A1HK-01A 2 1 In-Frame Intra-chr q13 q12 65866 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMBRD1-LGSN LMBRD1 chr6 70428848 - LGSN chr6 64004950 - Exonic hg19 THCA TCGA-FE-A239-01A 25 19 In-Frame Intra-chr q13 q12 Seq+ 65867 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMBRD1-ZBTB45 LMBRD1 chr6 70506705 - ZBTB45 chr19 59029040 - Exonic hg19 LGG TCGA-TM-A7CF-01A 2 1 CDS-5'UTR Inter-chr q13 q13.43 Transcription factor Seq+ 65868 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMBRD2-CTNND2 LMBRD2 chr5 36108636 - CTNND2 chr5 11365002 - Exonic hg19 SKCM TCGA-EE-A20I-06A 23 29 In-Frame Intra-chr p13.2 p15.2 Seq+ 65869 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMBRD2-KCNMB1 LMBRD2 chr5 36136411 - KCNMB1 chr5 169812475 - Exonic hg19 LGG TCGA-DB-5281-01A 2 1 CDS-5'UTR Intra-chr p13.2 q35.1 65870 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMBRD2-NADKD1 LMBRD2 chr5 36151658 - NADKD1 chr5 36207367 - Exonic hg19 LIHC TCGA-DD-A11C-01A 13 7 5'UTR-CDS Intra-chr p13.2 Seq+ 65871 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMCD1-ZNF589 LMCD1 chr3 8543666 - ZNF589 chr3 48302303 + Exonic hg19 PRAD TCGA-KK-A7B1-01A 5 3 In-Frame Intra-chr p25.3 p21.31 Transcription factor Seq+ 65872 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMF1-CCDC154 LMF1 chr16 960931 - CCDC154 chr16 1489127 - Exonic hg19 LGG TCGA-DU-A6S2-01A 2 1 In-Frame Intra-chr p13.3 p13.3 Tumor suppressor gene Seq+ 65873 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMNA-IGFBP2 LMNA chr1 156109108 - IGFBP2 chr2 217525456 + Exonic hg19 UCEC TCGA-EO-A3AY-01A 2 1 Out-of-frame Inter-chr q22 q35 65874 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMNA-PTN LMNA chr1 156107656 - PTN chr7 136938384 - Exonic hg19 BRCA TCGA-A2-A3XU-01A 2 40 5'UTR-CDS Inter-chr q22 q33 65875 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMNA-SYT11 LMNA chr1 156085065 - SYT11 chr1 155850291 + Exonic hg19 BRCA TCGA-AQ-A54N-01A 4 3 Out-of-frame Intra-chr q22 q22 Seq+ 65876 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMNB2-GNG7 LMNB2 chr19 2444402 - GNG7 chr19 2555186 - Exonic hg19 BRCA TCGA-A8-A08R-01A 18 18 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 65877 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMO7-MED4 LMO7 chr13 76398009 - MED4 chr13 48664554 - Exonic hg19 LUAD TCGA-73-4658-01A 4 2 Out-of-frame Intra-chr q22.2 q14.2 Seq+ 65878 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMO7-UCHL3 LMO7 chr13 76210862 - UCHL3 chr13 76140831 + Exonic hg19 BRCA TCGA-LL-A8F5-01A 6 8 5'UTR-CDS Intra-chr q22.2 q22.2 Seq+ 65879 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMTK2-IMMP2L LMTK2 chr7 97800986 - IMMP2L chr7 110603621 - Exonic hg19 LUSC TCGA-63-A5MG-01A 4 11 In-Frame Intra-chr q21.3 q31.1 Seq+ 65880 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMTK2-PCLO LMTK2 chr7 97780767 - PCLO chr7 82785708 - Exonic hg19 LUSC TCGA-92-8063-01A 9 4 Out-of-frame Intra-chr q21.3 q21.11 65881 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMTK3-DBP LMTK3 chr19 48994365 - DBP chr19 49134309 - Exonic hg19 STAD TCGA-CD-8527-01A 2 11 Out-of-frame Intra-chr q13.33 q13.33 Transcription factor Seq+ 65882 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMTK3-NOSIP LMTK3 chr19 49000650 - NOSIP chr19 50063949 - Exonic hg19 CESC TCGA-IR-A3LH-01A 5 4 CDS-5'UTR Intra-chr q13.33 q13.33 Seq+ 65883 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LMX1A-LELP1 LMX1A chr1 165322313 - LELP1 chr1 153177163 + Exonic hg19 LUAD TCGA-97-A4M3-01A 4 1 CDS-5'UTR Intra-chr q23.3 Transcription factor q21.3 Seq+ 65884 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LNPEP-CAST LNPEP chr5 96271878 - CAST chr5 96011243 + Exonic hg19 BRCA TCGA-A2-A0D2-01A 20 28 Out-of-frame Intra-chr q15 q15 Seq+ 65885 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LNPEP-FLT4 LNPEP chr5 96271878 - FLT4 chr5 180048904 - Exonic hg19 SKCM TCGA-D3-A8GN-06A 5 10 In-Frame Intra-chr q15 q35.3 TK:VEGFR Oncogene Seq+ 65886 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LNPEP-GPBP1 LNPEP chr5 96271878 - GPBP1 chr5 56545281 + Exonic hg19 KICH TCGA-KM-8443-01A 31 47 Out-of-frame Intra-chr q15 q11.2 Transcription factor Seq+ 65887 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LNPEP-PPIP5K2 LNPEP chr5 96322374 - PPIP5K2 chr5 102537223 + Exonic hg19 PRAD TCGA-XK-AAJ3-01A 25 31 Out-of-frame Intra-chr q15 q21.1 Seq+ 65888 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LNX1-GABRB1 LNX1 chr4 54439790 - GABRB1 chr4 47322144 + Exonic hg19 BRCA TCGA-A8-A09A-01A 4 5 In-Frame Intra-chr q12 p12 Seq+ 65889 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LNX1-IFT122 LNX1 chr4 54439790 - IFT122 chr3 129168714 + Exonic hg19 LUSC TCGA-43-7657-01A 35 27 In-Frame Inter-chr q12 q21.3 Seq+ 65890 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LOH12CR1-CDR2L LOH12CR1 chr12 12514283 - CDR2L chr17 72995599 + Exonic hg19 LIHC TCGA-BC-A10T-01A 2 3 In-Frame Inter-chr q25.1 Seq+ 65891 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LOH12CR1-HDAC7 LOH12CR1 chr12 12510443 - HDAC7 chr12 48185787 - Exonic hg19 PRAD TCGA-V1-A8WS-01A 8 7 In-Frame Intra-chr q13.11 65892 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LOH12CR1-PTPRR LOH12CR1 chr12 12514283 - PTPRR chr12 71095103 - Exonic hg19 LUSC TCGA-85-6175-01A 47 13 Out-of-frame Intra-chr q15 Seq+ 65893 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LONP1-CARD8 LONP1 chr19 5719715 - CARD8 chr19 48718641 - Exonic hg19 SKCM TCGA-D3-A3CC-06A 37 12 In-Frame Intra-chr p13.3 q13.33 Seq+ 65894 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LONP1-DDX27 LONP1 chr19 5691846 - DDX27 chr20 47849303 + Exonic hg19 LUAD TCGA-95-7944-01A 2 3 Out-of-frame Inter-chr p13.3 q13.13 65895 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LONP1-DUS3L LONP1 chr19 5705783 - DUS3L chr19 5790346 - Exonic hg19 STAD TCGA-BR-8289-01A 2 7 In-Frame Intra-chr p13.3 p13.3 Seq+ 65896 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LONP1-FUT6 LONP1 chr19 5714194 - FUT6 chr19 5835088 - Exonic hg19 ESCA TCGA-VR-A8Q7-01A 2 13 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 65897 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LONP1-MAP2K7 LONP1 chr19 5719715 - MAP2K7 chr19 7974640 + Exonic hg19 BRCA TCGA-C8-A12L-01A 8 9 Out-of-frame Intra-chr p13.3 p13.2 STE:STE7 Seq+ 65898 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LONP1-RAD51 LONP1 chr19 5700800 - RAD51 chr15 41023253 + Exonic hg19 CESC TCGA-EA-A50E-01A 55 37 In-Frame Inter-chr p13.3 q15.1 Seq+ 65899 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LONP1-RANBP3 LONP1 chr19 5696065 - RANBP3 chr19 5957984 - Exonic hg19 UCEC TCGA-AX-A2H4-01A 2 6 Out-of-frame Intra-chr p13.3 p13.3 65900 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LONP1-ZNF780B LONP1 chr19 5707071 - ZNF780B chr19 40542533 - Exonic hg19 BRCA TCGA-AC-A2BK-01A 49 70 Out-of-frame Intra-chr p13.3 Transcription factor Seq+ 65901 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LONP2-CHRM3 LONP2 chr16 48368269 - CHRM3 chr1 240070733 + Exonic hg19 LGG TCGA-S9-A89Z-01A 2 4 CDS-5'UTR Inter-chr q12.1 q43 Seq+ 65902 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LONP2-EGLN3 LONP2 chr16 48304185 - EGLN3 chr14 34638852 - Exonic hg19 CESC TCGA-FU-A3TX-01A 7 3 Out-of-frame Inter-chr q12.1 q13.1 Tumor suppressor gene Seq+ 65903 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LONP2-HIRA LONP2 chr16 48337216 - HIRA chr22 19398301 - Exonic hg19 LUAD TCGA-44-4112-01A 13 3 In-Frame Inter-chr q12.1 q11.21 Tumor suppressor gene Seq+ 65904 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LONRF1-PSMB7 LONRF1 chr8 12612209 - PSMB7 chr9 127146935 - Exonic hg19 SKCM TCGA-EB-A4OY-01A 17 28 In-Frame Inter-chr p23.1 q33.3 Seq+ 65905 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LOXL3-C2orf65 LOXL3 chr2 74777312 - C2orf65 chr2 74786001 - Exonic hg19 UCEC TCGA-EO-A3AS-01A 3 2 In-Frame Intra-chr p13.1 65906 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPAR1-EIF2C3 LPAR1 chr9 113703701 - EIF2C3 chr1 36499775 + Exonic hg19 CHOL TCGA-W5-AA34-01A 4 1 In-Frame Inter-chr q31.3 65907 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPAR3-ST6GALNAC3 LPAR3 chr1 85331068 - ST6GALNAC3 chr1 77093137 + Exonic hg19 BRCA TCGA-A2-A0D0-01A 5 4 Out-of-frame Intra-chr p22.3 p31.1 Seq+ 65908 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPCAT1-DAP LPCAT1 chr5 1523825 - DAP chr5 10683683 - Exonic hg19 KIRC TCGA-BP-5175-01A 19 24 Out-of-frame Intra-chr p15.2 Seq+ 65909 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPCAT1-MED13 LPCAT1 chr5 1501576 - MED13 chr17 60024378 - Exonic hg19 SARC TCGA-DX-A1L2-01A 7 5 Out-of-frame Inter-chr q23.2 Seq+ 65910 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPCAT1-SDHA LPCAT1 chr5 1488506 - SDHA chr5 251453 + Exonic hg19 LUAD TCGA-55-8506-01A 5 65 In-Frame Intra-chr p15.33 Oncogene Tumor suppressor gene 65911 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPCAT2-C19orf29 LPCAT2 chr16 55571544 - C19orf29 chr19 3620270 - Exonic hg19 BRCA TCGA-D8-A1XL-01A 6 2 In-Frame Inter-chr q12.2 65912 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPCAT2-DNAJA2 LPCAT2 chr16 55543264 - DNAJA2 chr16 46991132 - Exonic hg19 COAD TCGA-CM-4743-01A 4 6 In-Frame Intra-chr q12.2 q11.2 Seq+ 65913 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPCAT3-LRRC23 LPCAT3 chr12 7125578 - LRRC23 chr12 6992868 + Exonic hg19 LUAD TCGA-NJ-A4YF-01A 6 1 CDS-5'UTR Intra-chr p13.31 p13.31 Seq+ 65914 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPCAT4-SPRED1 LPCAT4 chr15 34654397 - SPRED1 chr15 38591574 + Exonic hg19 ESCA TCGA-2H-A9GN-01A 4 16 In-Frame Intra-chr q14 q14 Seq+ 65915 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPHN1-LGALS4 LPHN1 chr19 14288343 - LGALS4 chr19 39299588 - Exonic hg19 ESCA TCGA-L5-A891-01A 4 7 In-Frame Intra-chr Seq+ 65916 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPHN2-AK5 LPHN2 chr1 82302742 - AK5 chr1 77759478 + Exonic hg19 PRAD TCGA-EJ-A46G-01A 140 78 In-Frame Intra-chr p31.1 Seq+ 65917 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPHN3-AMTN LPHN3 chr4 62679607 - AMTN chr4 71389585 + Exonic hg19 KIRC TCGA-BP-5201-01A 7 4 Out-of-frame Intra-chr q13.3 Seq+ 65918 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPHN3-BBS9 LPHN3 chr4 62383236 - BBS9 chr7 33644477 + Exonic hg19 LUSC TCGA-92-7341-01A 6 6 Out-of-frame Inter-chr p14.3 Seq+ 65919 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPHN3-DBX2 LPHN3 chr4 62453158 - DBX2 chr12 45429897 - Exonic hg19 LGG TCGA-DB-A64X-01A 3 1 Out-of-frame Inter-chr q12 Transcription factor 65920 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPHN3-PPP3CA LPHN3 chr4 62679607 - PPP3CA chr4 102030235 - Exonic hg19 BRCA TCGA-E2-A10F-01A 3 3 In-Frame Intra-chr q24 Seq+ 65921 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPHN3-ST3GAL5 LPHN3 chr4 62453158 - ST3GAL5 chr2 86090608 - Exonic hg19 LGG TCGA-HT-7477-01B 2 1 Out-of-frame Inter-chr p11.2 65922 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPIN2-DLGAP1 LPIN2 chr18 3013085 - DLGAP1 chr18 3880140 - Exonic hg19 UCEC TCGA-A5-A3LP-01A 2 1 5'UTR-5'UTR Intra-chr p11.31 p11.31 Seq+ 65923 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPIN2-DLGAP1 LPIN2 chr18 3013085 - DLGAP1 chr18 3582246 - Exonic hg19 ESCA TCGA-R6-A6Y0-01B 2 10 5'UTR-CDS Intra-chr p11.31 p11.31 Seq+ 65924 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPIN2-MYOM1 LPIN2 chr18 3013085 - MYOM1 chr18 3102628 - Exonic hg19 LUAD TCGA-97-A4M3-01A 7 10 5'UTR-CDS Intra-chr p11.31 p11.31 Seq+ 65925 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPIN2-MYOM1 LPIN2 chr18 3013085 - MYOM1 chr18 3079340 - Exonic hg19 UCS TCGA-N8-A4PP-01A 6 8 5'UTR-CDS Intra-chr p11.31 p11.31 Seq+ 65926 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPIN2-MYOM1 LPIN2 chr18 2982666 - MYOM1 chr18 3102628 - Exonic hg19 LIHC TCGA-PD-A5DF-01A 19 23 5'UTR-CDS Intra-chr p11.31 p11.31 Seq+ 65927 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPP-CASR LPP chr3 188202492 - CASR chr3 121980375 + Exonic hg19 OV TCGA-23-1120-01A 2 2 In-Frame Intra-chr q27.3 Oncogene q13.33 Seq+ 65928 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPP-CLPTM1L LPP chr3 188478070 - CLPTM1L chr5 1338097 - Exonic hg19 LIHC TCGA-BC-A8YO-01A 2 4 Out-of-frame Inter-chr q27.3 Oncogene p15.33 Seq+ 65929 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPP-CLSTN2 LPP chr3 187943315 - CLSTN2 chr3 140251166 + Exonic hg19 HNSC TCGA-CV-7410-01A 16 20 5'UTR-CDS Intra-chr q27.3 Oncogene q23 Seq+ 65930 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPP-F2 LPP chr3 188059507 - F2 chr11 46741252 + Exonic hg19 OV TCGA-13-0760-01A 5 8 5'UTR-CDS Inter-chr q27.3 Oncogene p11.2 Seq+ 65931 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPP-FAM108C1 LPP chr3 187943315 - FAM108C1 chr15 81046492 + Exonic hg19 BRCA TCGA-A8-A06U-01A 12 8 5'UTR-CDS Inter-chr q27.3 Oncogene 65932 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPP-GOLIM4 LPP chr3 187943315 - GOLIM4 chr3 167766153 - Exonic hg19 LUSC TCGA-22-5491-01A 4 4 5'UTR-CDS Intra-chr q27.3 Oncogene q26.2 Seq+ 65933 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPP-HRASLS LPP chr3 188202492 - HRASLS chr3 192973440 + Exonic hg19 SARC TCGA-SI-AA8B-01A 2 2 CDS-5'UTR Intra-chr q27.3 Oncogene q29 65934 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPP-KCNIP4 LPP chr3 187943315 - KCNIP4 chr4 20852290 - Exonic hg19 SARC TCGA-DX-AB2Z-01A 4 3 5'UTR-5'UTR Inter-chr q27.3 Oncogene p15.2 65935 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPP-LEPREL1 LPP chr3 188327632 - LEPREL1 chr3 189713231 - Exonic hg19 HNSC TCGA-CV-6941-01A 18 7 In-Frame Intra-chr q27.3 Oncogene Seq+ 65936 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPP-LIPJ LPP chr3 188426181 - LIPJ chr10 90347023 + Exonic hg19 PRAD TCGA-J4-AATZ-01A 5 1 CDS-5'UTR Inter-chr q27.3 Oncogene q23.31 65937 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPP-SPATA16 LPP chr3 188584166 - SPATA16 chr3 172737365 - Exonic hg19 BRCA TCGA-AQ-A04L-01B 2 8 In-Frame Intra-chr q27.3 Oncogene q26.31 Seq+ 65938 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPP-ST6GAL1 LPP chr3 187871809 - ST6GAL1 chr3 186790637 + Exonic hg19 LUSC TCGA-66-2756-01A 7 9 5'UTR-CDS Intra-chr q27.3 Oncogene q27.3 Seq+ 65939 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPP-TP63 LPP chr3 188059507 - TP63 chr3 189526061 + Exonic hg19 BRCA TCGA-E9-A1RH-01A 14 17 5'UTR-CDS Intra-chr q27.3 Oncogene q28 Tumor suppressor gene Transcription factor Seq+ 65940 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LPP-ZNRF1 LPP chr3 187943315 - ZNRF1 chr16 75127470 + Exonic hg19 UCS TCGA-N5-A4RF-01A 56 41 5'UTR-CDS Inter-chr q27.3 Oncogene q23.1 Seq+ 65941 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRAT-NAALADL2 LRAT chr4 155557548 - NAALADL2 chr3 174814580 + Exonic hg19 SARC TCGA-VT-A80G-01A 12 3 5'UTR-CDS Inter-chr q32.1 q26.31 Seq+ 65942 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRAT-VTI1A LRAT chr4 155557548 - VTI1A chr10 114575049 + Exonic hg19 LIHC TCGA-GJ-A6C0-01A 3 3 5'UTR-CDS Inter-chr q32.1 q25.2 Seq+ 65943 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRBA-CASP12 LRBA chr4 151604703 - CASP12 chr11 104768195 - Exonic hg19 BRCA TCGA-A8-A07L-01A 17 4 Out-of-frame Inter-chr q31.3 q22.3 Seq+ 65944 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRBA-CHCHD3 LRBA chr4 151199005 - CHCHD3 chr7 132481338 - Exonic hg19 KIRP TCGA-G7-A8LD-01A 26 38 In-Frame Inter-chr q31.3 q33 Transcription factor Seq+ 65945 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRBA-DLG2 LRBA chr4 151271144 - DLG2 chr11 83770527 - Exonic hg19 UCEC TCGA-B5-A1MS-01B 14 6 Out-of-frame Inter-chr q31.3 q14.1 Seq+ 65946 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRBA-DRD3 LRBA chr4 151749332 - DRD3 chr3 113847759 - Exonic hg19 LUAD TCGA-35-5375-01A 3 2 Out-of-frame Inter-chr q31.3 q13.31 Seq+ 65947 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRBA-ESF1 LRBA chr4 151719233 - ESF1 chr20 13699631 - Exonic hg19 BRCA TCGA-C8-A1HN-01A 13 8 Out-of-frame Inter-chr q31.3 p12.1 Seq+ 65948 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRBA-GRIK3 LRBA chr4 151518235 - GRIK3 chr1 37271927 - Exonic hg19 BRCA TCGA-BH-A18T-01A 3 2 Out-of-frame Inter-chr q31.3 p34.3 65949 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRBA-HFE2 LRBA chr4 151656410 - HFE2 chr1 145415279 + Exonic hg19 PRAD TCGA-VN-A88N-01A 6 11 Out-of-frame Inter-chr q31.3 q21.1 Seq+ 65950 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRBA-PET112 LRBA chr4 151935579 - PET112 chr4 152640690 - Exonic hg19 STAD TCGA-BR-8486-01A 12 52 In-Frame Intra-chr q31.3 Seq+ 65951 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRBA-PPARGC1A LRBA chr4 151935579 - PPARGC1A chr4 23886554 - Exonic hg19 BRCA TCGA-EW-A6SD-01A 13 9 In-Frame Intra-chr q31.3 p15.2 Seq+ 65952 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRBA-RXFP1 LRBA chr4 151509200 - RXFP1 chr4 159549790 + Exonic hg19 BLCA TCGA-GD-A2C5-01A 5 1 Out-of-frame Intra-chr q31.3 q32.1 65953 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRBA-SH3D19 LRBA chr4 151935579 - SH3D19 chr4 152060999 - Exonic hg19 LUSC TCGA-60-2719-01A 51 33 In-Frame Intra-chr q31.3 q31.3 KB Seq+ 65954 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRBA-SH3D19 LRBA chr4 151682935 - SH3D19 chr4 152070713 - Exonic hg19 LAML TCGA-AB-2979-03B 5 5 Out-of-frame Intra-chr q31.3 q31.3 KB Seq+ 65955 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRBA-SH3D19 LRBA chr4 151935579 - SH3D19 chr4 152070713 - Exonic hg19 HNSC TCGA-BA-4074-01A 18 13 In-Frame Intra-chr q31.3 q31.3 KB Seq+ 65956 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRBA-SH3D19 LRBA chr4 151682935 - SH3D19 chr4 152070713 - Exonic hg19 COAD TCGA-CM-6170-01A 10 17 Out-of-frame Intra-chr q31.3 q31.3 KB Seq+ 65957 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRBA-SH3D19 LRBA chr4 151656410 - SH3D19 chr4 152147238 - Exonic hg19 BLCA TCGA-E7-A97Q-01A 2 2 CDS-5'UTR Intra-chr q31.3 q31.3 KB Seq+ 65958 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRBA-SH3D19 LRBA chr4 151842350 - SH3D19 chr4 152096826 - Exonic hg19 BLCA TCGA-FD-A3B7-01A 3 1 CDS-5'UTR Intra-chr q31.3 q31.3 KB Seq+ 65959 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRBA-TBC1D9 LRBA chr4 151656410 - TBC1D9 chr4 141583261 - Exonic hg19 SKCM TCGA-Z2-A8RT-06A 2 2 Out-of-frame Intra-chr q31.3 q31.21 Seq+ 65960 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRCH1-NUDT15 LRCH1 chr13 47127838 - NUDT15 chr13 48615056 + Exonic hg19 READ TCGA-AF-2693-01A 6 12 Out-of-frame Intra-chr q14.13 q14.2 Seq+ 65961 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRCH1-PHF11 LRCH1 chr13 47303119 - PHF11 chr13 50080771 + Exonic hg19 BLCA TCGA-4Z-AA80-01A 5 2 Out-of-frame Intra-chr q14.13 q14.2 Seq+ 65962 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRCH3-FMN2 LRCH3 chr3 197592342 - FMN2 chr1 240635672 + Exonic hg19 UCS TCGA-N9-A4Q1-01A 4 1 Out-of-frame Inter-chr q29 q43 65963 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRCH3-MED12L LRCH3 chr3 197544173 - MED12L chr3 150834125 + Exonic hg19 BRCA TCGA-AO-A0JA-01A 3 2 In-Frame Intra-chr q29 q25.1 Seq+ 65964 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRCH4-ACOT12 LRCH4 chr7 100179400 - ACOT12 chr5 80655857 - Exonic hg19 READ TCGA-F5-6465-01A 4 4 Out-of-frame Inter-chr q22.1 q14.1 Seq+ 65965 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRFN1-DLL3 LRFN1 chr19 39804571 - DLL3 chr19 39993455 + Exonic hg19 ESCA TCGA-2H-A9GN-01A 3 21 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 65966 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRFN3-FXYD7 LRFN3 chr19 36428457 - FXYD7 chr19 35639597 + Exonic hg19 ESCA TCGA-LN-A49L-01A 29 73 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 65967 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRFN5-DPF3 LRFN5 chr14 42077765 - DPF3 chr14 73238601 - Exonic hg19 LGG TCGA-P5-A77W-01A 3 1 5'UTR-CDS Intra-chr q21.1 q24.2 Transcription factor Seq+ 65968 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRIG1-SLC26A7 LRIG1 chr3 66444464 - SLC26A7 chr8 92261767 + Exonic hg19 KIRC TCGA-B0-5713-01A 5 2 CDS-5'UTR Inter-chr Tumor suppressor gene q21.3 Seq+ 65969 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRIG1-SUCLG2 LRIG1 chr3 66501983 - SUCLG2 chr3 67451275 - Exonic hg19 PRAD TCGA-KK-A8ID-01A 3 4 Out-of-frame Intra-chr Tumor suppressor gene p14.1 Seq+ 65970 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRIG3-ATF7 LRIG3 chr12 59307763 - ATF7 chr12 53994805 - Exonic hg19 PAAD TCGA-HZ-A49I-01A 86 38 CDS-5'UTR Intra-chr q14.1 Tumor suppressor gene q13.13 Transcription factor Seq+ 65971 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRIG3-PIP4K2C LRIG3 chr12 59307763 - PIP4K2C chr12 57995709 + Exonic hg19 BRCA TCGA-AR-A1AH-01A 82 20 CDS-3'UTR Intra-chr q14.1 Tumor suppressor gene q13.3 Seq+ 65972 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRIG3-RP11-362K2.2 LRIG3 chr12 59307763 - RP11-362K2.2 chr12 59206196 + Exonic hg19 ESCA TCGA-LN-A4A1-01A 9 164 Out-of-frame Intra-chr q14.1 Tumor suppressor gene 65973 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRIG3-SLC16A7 LRIG3 chr12 59267837 - SLC16A7 chr12 60165000 + Exonic hg19 SARC TCGA-DX-A1KU-01A 41 20 In-Frame Intra-chr q14.1 Tumor suppressor gene q14.1 Seq+ 65974 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRIG3-XRCC6BP1 LRIG3 chr12 59307763 - XRCC6BP1 chr12 58339411 + Exonic hg19 SARC TCGA-MB-A8JL-01A 156 129 Out-of-frame Intra-chr q14.1 Tumor suppressor gene 65975 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP1-ATF1 LRP1 chr12 57539273 - ATF1 chr12 51189692 + Exonic hg19 SARC TCGA-DX-AB2G-01A 13 2 Out-of-frame Intra-chr q13.3 q13.12 Oncogene Transcription factor Seq+ 65976 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP1-CAND1 LRP1 chr12 57596320 - CAND1 chr12 67686402 + Exonic hg19 SARC TCGA-DX-A3U6-01A 15 25 Out-of-frame Intra-chr q13.3 q14.3 Seq+ 65977 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP1-FAM19A2 LRP1 chr12 57569488 - FAM19A2 chr12 62104198 - Exonic hg19 SARC TCGA-3B-A9HS-01A 166 89 Out-of-frame Intra-chr q13.3 q14.1 Seq+ 65978 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP1-KLK3 LRP1 chr12 57548153 - KLK3 chr19 51358191 + Exonic hg19 PRAD TCGA-SU-A7E7-01A 2 1 Out-of-frame Inter-chr q13.3 q13.33 65979 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP1-MCRS1 LRP1 chr12 57604662 - MCRS1 chr12 49953604 - Exonic hg19 SARC TCGA-DX-AB2G-01A 2722 1698 In-Frame Intra-chr q13.3 q13.12 65980 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP1-SLC39A5 LRP1 chr12 57522814 - SLC39A5 chr12 56624988 + Exonic hg19 UCS TCGA-NA-A5I1-01A 51 26 CDS-5'UTR Intra-chr q13.3 q13.3 Seq+ 65981 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP1-TMEM194A LRP1 chr12 57537581 - TMEM194A chr12 57466695 - Exonic hg19 SKCM TCGA-GF-A769-01A 25 6 In-Frame Intra-chr q13.3 Seq+ 65982 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP1-XPO5 LRP1 chr12 57539273 - XPO5 chr6 43530083 - Exonic hg19 GBM TCGA-06-0686-01A 3 8 Out-of-frame Inter-chr q13.3 p21.1 Tumor suppressor gene Seq+ 65983 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP11-ULBP2 LRP11 chr6 150147400 - ULBP2 chr6 150269859 + Exonic hg19 BRCA TCGA-A8-A07F-01A 10 3 CDS-3'UTR Intra-chr q25.1 q25.1 Seq+ 65984 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP12-CCL28 LRP12 chr8 105544135 - CCL28 chr5 43388578 - Exonic hg19 KICH TCGA-KL-8341-01A 6 5 In-Frame Inter-chr q22.3 p12 Seq+ 65985 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP12-KCNB2 LRP12 chr8 105601047 - KCNB2 chr8 73479877 + Exonic hg19 BRCA TCGA-AR-A0TV-01A 16 10 CDS-5'UTR Intra-chr q22.3 q21.11 Seq+ 65986 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP12-LAPTM4B LRP12 chr8 105601047 - LAPTM4B chr8 98863625 + Exonic hg19 BRCA TCGA-AC-A6IX-01A 40 24 Out-of-frame Intra-chr q22.3 q22.1 Seq+ 65987 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP12-LAPTM4B LRP12 chr8 105601047 - LAPTM4B chr8 98863625 + Exonic hg19 BRCA TCGA-AC-A6IX-06A 25 24 Out-of-frame Intra-chr q22.3 q22.1 Seq+ 65988 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP12-RALGPS1 LRP12 chr8 105601047 - RALGPS1 chr9 129724504 + Exonic hg19 SKCM TCGA-D3-A3MO-06A 17 8 CDS-5'UTR Inter-chr q22.3 q33.3 Seq+ 65989 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP12-RIMS2 LRP12 chr8 105521167 - RIMS2 chr8 105160835 + Exonic hg19 BRCA TCGA-BH-A0B7-01A 4 3 Out-of-frame Intra-chr q22.3 q22.3 65990 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP12-TRAPPC9 LRP12 chr8 105544135 - TRAPPC9 chr8 141034176 - Exonic hg19 BRCA TCGA-E2-A14X-01A 60 25 Out-of-frame Intra-chr q22.3 q24.3 Seq+ 65991 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP12-VPS13B LRP12 chr8 105601047 - VPS13B chr8 100025988 + Exonic hg19 BRCA TCGA-A2-A04Y-01A 4 11 CDS-5'UTR Intra-chr q22.3 q22.2 Seq+ 65992 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP1B-ADAP1 LRP1B chr2 142237965 - ADAP1 chr7 975141 - Exonic hg19 CESC TCGA-EK-A2GZ-01A 3 1 In-Frame Inter-chr q22.2 Oncogene Tumor suppressor gene p22.3 65993 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP1B-HECW2 LRP1B chr2 142567848 - HECW2 chr2 197208488 - Exonic hg19 LUSC TCGA-22-5482-01A 10 6 In-Frame Intra-chr q22.2 Oncogene Tumor suppressor gene q32.3 Seq+ 65994 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP2-FASTKD1 LRP2 chr2 170018982 - FASTKD1 chr2 170388000 - Exonic hg19 CESC TCGA-EK-A2RJ-01A 28 28 In-Frame Intra-chr q31.1 q31.1 Seq+ 65995 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP3-THAP8 LRP3 chr19 33693892 - THAP8 chr19 36531038 - Exonic hg19 BRCA TCGA-BH-A0GY-01A 15 9 In-Frame Intra-chr q13.11 q13.12 Transcription factor Seq+ 65996 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP3-VAV1 LRP3 chr19 33687683 - VAV1 chr19 6820713 + Exonic hg19 LGG TCGA-P5-A5EU-01A 4 5 Out-of-frame Intra-chr q13.11 p13.3 Seq+ 65997 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP4-CELF1 LRP4 chr11 46905422 - CELF1 chr11 47510576 - Exonic hg19 OV TCGA-13-A5FT-01A 2 6 In-Frame Intra-chr p11.2 p11.2 Seq+ 65998 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP5-ALKBH5 LRP5 chr11 68080273 - ALKBH5 chr17 18098269 + Exonic hg19 BRCA TCGA-PE-A5DC-01A 6 7 Out-of-frame Inter-chr q13.2 p11.2 Seq+ 65999 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP5-ATG16L2 LRP5 chr11 68207384 - ATG16L2 chr11 72539404 + Exonic hg19 GBM TCGA-06-2561-01A 2 8 Out-of-frame Intra-chr q13.2 q13.4 Seq+ 66000 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP5-CASQ2 LRP5 chr11 68125315 - CASQ2 chr1 116287533 - Exonic hg19 BRCA TCGA-BH-A0W3-01A 11 4 Out-of-frame Inter-chr q13.2 p13.1 Seq+ 66001 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP5-CHD6 LRP5 chr11 68131411 - CHD6 chr20 40086068 - Exonic hg19 LUAD TCGA-97-A4M3-01A 9 2 Out-of-frame Inter-chr q13.2 q12 Seq+ 66002 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP5-CLPB LRP5 chr11 68080273 - CLPB chr11 72070052 - Exonic hg19 HNSC TCGA-CV-7418-01A 19 53 In-Frame Intra-chr q13.2 q13.4 Seq+ 66003 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP5-DLG2 LRP5 chr11 68157520 - DLG2 chr11 83676511 - Exonic hg19 BRCA TCGA-A8-A09I-01A 4 9 In-Frame Intra-chr q13.2 q14.1 Seq+ 66004 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP5-MOGAT2 LRP5 chr11 68193655 - MOGAT2 chr11 75431037 + Exonic hg19 BRCA TCGA-A1-A0SQ-01A 91 24 In-Frame Intra-chr q13.2 q13.5 Seq+ 66005 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP5-NOX4 LRP5 chr11 68207384 - NOX4 chr11 89088211 - Exonic hg19 BRCA TCGA-BH-A18L-01A 4 3 Out-of-frame Intra-chr q13.2 q14.3 Seq+ 66006 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP5-RBFOX1 LRP5 chr11 68125315 - RBFOX1 chr16 6704604 + Exonic hg19 BLCA TCGA-XF-AAML-01A 4 3 CDS-5'UTR Inter-chr q13.2 p13.3 Seq+ 66007 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP5-UVRAG LRP5 chr11 68207384 - UVRAG chr11 75776754 + Exonic hg19 SKCM TCGA-EB-A57M-01A 2 3 Out-of-frame Intra-chr q13.2 q13.5 Tumor suppressor gene Seq+ 66008 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP5-VPS26B LRP5 chr11 68181480 - VPS26B chr11 134114832 + Exonic hg19 LUAD TCGA-73-4658-01A 28 15 In-Frame Intra-chr q13.2 q25 Seq+ 66009 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP5-VPS37C LRP5 chr11 68115711 - VPS37C chr11 60906307 - Exonic hg19 LGG TCGA-HT-7686-01A 3 2 CDS-5'UTR Intra-chr q13.2 q12.2 66010 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP5-ZNF317 LRP5 chr11 68080273 - ZNF317 chr19 9266601 + Exonic hg19 HNSC TCGA-IQ-7631-01A 6 10 CDS-5'UTR Inter-chr q13.2 p13.2 Transcription factor Seq+ 66011 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP5-ZNF507 LRP5 chr11 68197168 - ZNF507 chr19 32873373 + Exonic hg19 BRCA TCGA-E2-A150-01A 11 19 Out-of-frame Inter-chr q13.2 q13.11 Transcription factor Seq+ 66012 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP5L-SGSM3 LRP5L chr22 25771780 - SGSM3 chr22 40796700 + Exonic hg19 SARC TCGA-SI-AA8C-01A 10 7 5'UTR-5'UTR Intra-chr q11.23 q13.1 Seq+ 66013 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP6-AC007621.1 LRP6 chr12 12333977 - AC007621.1 chr12 12509739 - Exonic hg19 LIHC TCGA-BC-A10T-01A 2 1 Out-of-frame Intra-chr p13.2 66014 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP6-DUSP16 LRP6 chr12 12397196 - DUSP16 chr12 12674397 - Exonic hg19 UCS TCGA-N8-A56S-01A 18 11 CDS-5'UTR Intra-chr Seq+ 66015 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP6-GPR19 LRP6 chr12 12397196 - GPR19 chr12 12815404 - Exonic hg19 BRCA TCGA-A7-A0CG-01A 5 2 CDS-5'UTR Intra-chr p13.1 Seq+ 66016 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP6-LRRC23 LRP6 chr12 12397196 - LRRC23 chr12 7014749 + Exonic hg19 TGCT TCGA-S6-A8JY-01A 38 29 CDS-5'UTR Intra-chr p13.31 Seq+ 66017 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP6-MANSC1 LRP6 chr12 12397196 - MANSC1 chr12 12483892 - Exonic hg19 LIHC TCGA-BC-A216-01A 21 19 Out-of-frame Intra-chr Seq+ 66018 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP6-MANSC1 LRP6 chr12 12397196 - MANSC1 chr12 12496348 - Exonic hg19 TGCT TCGA-XE-AANI-01A 22 23 CDS-5'UTR Intra-chr Seq+ 66019 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP6-NINJ2 LRP6 chr12 12332744 - NINJ2 chr12 675344 - Exonic hg19 LGG TCGA-E1-5304-01A 297 209 In-Frame Intra-chr p13.33 Seq+ 66020 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP6-PTPRO LRP6 chr12 12332744 - PTPRO chr12 15733631 + Exonic hg19 PAAD TCGA-F2-6879-01A 45 21 In-Frame Intra-chr p12.3 Seq+ 66021 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP8-PAX8 LRP8 chr1 53723991 - PAX8 chr2 114004496 - Exonic hg19 THCA TCGA-BJ-A291-01A 317 276 In-Frame Inter-chr p32.3 q14.1 Oncogene Transcription factor Seq+ 66022 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP8-RAD51C LRP8 chr1 53720789 - RAD51C chr17 56772292 + Exonic hg19 BRCA TCGA-A8-A08F-01A 33 17 In-Frame Inter-chr p32.3 q22 Tumor suppressor gene Seq+ 66023 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP8-TMEM217 LRP8 chr1 53716362 - TMEM217 chr6 37186817 - Exonic hg19 BRCA TCGA-AC-A6IW-01A 7 13 CDS-5'UTR Inter-chr p32.3 p21.2 Seq+ 66024 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRP8-USP24 LRP8 chr1 53792545 - USP24 chr1 55562845 - Exonic hg19 LUAD TCGA-55-6987-01A 7 5 Out-of-frame Intra-chr p32.3 p32.3 Seq+ 66025 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRPPRC-CYTIP LRPPRC chr2 44161329 - CYTIP chr2 158300518 - Exonic hg19 BRCA TCGA-OL-A66I-01A 4 4 In-Frame Intra-chr p21 q24.1 Seq+ 66026 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRR1-KCNH5 LRR1 chr14 50065921 - KCNH5 chr14 63473190 - Exonic hg19 BRCA TCGA-C8-A12W-01A 2 9 Out-of-frame Intra-chr q21.3 q23.2 Seq+ 66027 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRR1-MTHFD1 LRR1 chr14 50074839 - MTHFD1 chr14 64882076 + Exonic hg19 BRCA TCGA-A2-A3XW-01A 3 2 Out-of-frame Intra-chr q21.3 q23.3 Seq+ 66028 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC1-DAAM2 LRRC1 chr6 53707025 - DAAM2 chr6 39824023 + Exonic hg19 BRCA TCGA-AR-A24Z-01A 3 2 CDS-5'UTR Intra-chr p12.1 p21.2 Seq+ 66029 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC1-FRY LRRC1 chr6 53660213 - FRY chr13 32705809 + Exonic hg19 BRCA TCGA-C8-A1HG-01A 5 3 Out-of-frame Inter-chr p12.1 q13.1 Seq+ 66030 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC1-SH3GL1 LRRC1 chr6 53707025 - SH3GL1 chr19 4366991 - Exonic hg19 LGG TCGA-TM-A7CF-01A 6 6 Out-of-frame Inter-chr p12.1 p13.3 Seq+ 66031 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC1-SH3GL1 LRRC1 chr6 53707025 - SH3GL1 chr19 4366991 - Exonic hg19 LGG TCGA-TM-A7CF-02A 8 8 Out-of-frame Inter-chr p12.1 p13.3 Seq+ 66032 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC1-SUPT3H LRRC1 chr6 53707025 - SUPT3H chr6 44797594 - Exonic hg19 LGG TCGA-HT-7477-01B 2 4 Out-of-frame Intra-chr p12.1 p21.1 66033 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC16A-CDKAL1 LRRC16A chr6 25557078 - CDKAL1 chr6 21198252 + Exonic hg19 PRAD TCGA-XJ-A9DX-01A 6 2 In-Frame Intra-chr p22.3 66034 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC16A-CTSW LRRC16A chr6 25581667 - CTSW chr11 65648878 + Exonic hg19 BLCA TCGA-K4-A3WV-01A 18 9 Out-of-frame Inter-chr q13.1 Seq+ 66035 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC16A-DCDC2 LRRC16A chr6 25540306 - DCDC2 chr6 24353851 - Exonic hg19 MESO TCGA-UD-AAC6-01A 4 4 Out-of-frame Intra-chr p22.3 Tumor suppressor gene Seq+ 66036 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC16A-MRS2 LRRC16A chr6 25285137 - MRS2 chr6 24405396 + Exonic hg19 BRCA TCGA-AR-A0U4-01A 4 2 Out-of-frame Intra-chr p22.3 Seq+ 66037 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC16A-SLC17A1 LRRC16A chr6 25285137 - SLC17A1 chr6 25820143 - Exonic hg19 LUAD TCGA-49-4487-01A 3 3 In-Frame Intra-chr p22.2 Seq+ 66038 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC20-NODAL LRRC20 chr10 72100309 - NODAL chr10 72195739 - Exonic hg19 BRCA TCGA-A8-A09N-01A 8 6 In-Frame Intra-chr q22.1 q22.1 66039 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC23-LPCAT3 LRRC23 chr12 7015826 - LPCAT3 chr12 7092700 - Exonic hg19 LUSC TCGA-85-8584-01A 5 2 In-Frame Intra-chr p13.31 p13.31 Seq+ 66040 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC29-FHOD1 LRRC29 chr16 67260533 - FHOD1 chr16 67273357 - Exonic hg19 BRCA TCGA-A7-A4SD-01A 2 1 5'UTR-CDS Intra-chr q22.1 q22.1 66041 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC37B-RAD51C LRRC37B chr17 30345073 - RAD51C chr17 56811479 + Exonic hg19 BRCA TCGA-AO-A1KR-01A 2 2 5'UTR-CDS Intra-chr q11.2 q22 Tumor suppressor gene Seq+ 66042 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC40-C1orf151 LRRC40 chr1 70671073 - C1orf151 chr1 19948594 + Exonic hg19 MESO TCGA-TS-A7OY-01A 15 14 Out-of-frame Intra-chr p31.1 66043 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC41-FAM159A LRRC41 chr1 46763235 - FAM159A chr1 53108535 + Exonic hg19 KIRC TCGA-CZ-4863-01A 141 80 Out-of-frame Intra-chr p33 p32.3 Seq+ 66044 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC45-GNB1 LRRC45 chr17 79987061 - GNB1 chr1 1749314 - Exonic hg19 LUAD TCGA-44-6778-01A 17 11 In-Frame Inter-chr q25.3 p36.33 Seq+ 66045 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC56-DEAF1 LRRC56 chr11 549998 - DEAF1 chr11 679816 - Exonic hg19 TGCT TCGA-2G-AAM3-01A 2 3 Out-of-frame Intra-chr p15.5 Transcription factor Seq+ 66046 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC58-FSTL1 LRRC58 chr3 120067591 - FSTL1 chr3 120134874 - Exonic hg19 PRAD TCGA-HC-8265-01B 2 1 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 66047 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC58-LSAMP LRRC58 chr3 120067591 - LSAMP chr3 115805403 - Exonic hg19 PRAD TCGA-EJ-A65D-01A 2 2 In-Frame Intra-chr q13.33 q13.31 Tumor suppressor gene Seq+ 66048 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC59-NUP107 LRRC59 chr17 48469759 - NUP107 chr12 69135593 + Exonic hg19 BRCA TCGA-A8-A0A7-01A 791 1479 In-Frame Inter-chr q21.33 q15 Seq+ 66049 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC59-SPAG9 LRRC59 chr17 48469759 - SPAG9 chr17 49057278 - Exonic hg19 BRCA TCGA-E9-A1NC-01A 59 42 In-Frame Intra-chr q21.33 q21.33 Seq+ 66050 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC6-EXT1 LRRC6 chr8 133687730 - EXT1 chr8 118849440 - Exonic hg19 BRCA TCGA-E2-A15T-01A 9 3 Out-of-frame Intra-chr q24.22 q24.11 Oncogene Tumor suppressor gene Seq+ 66051 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC61-DOCK4 LRRC61 chr7 150023099 - DOCK4 chr7 111629218 - Exonic hg19 LIHC TCGA-NI-A8LF-01A 2 4 5'UTR-CDS Intra-chr q36.1 q31.1 Seq+ 66052 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC68-ALOX15B LRRC68 chr19 45596785 - ALOX15B chr17 7945687 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 14 8 Out-of-frame Inter-chr p13.1 Tumor suppressor gene 66053 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC68-APOC2 LRRC68 chr19 45596785 - APOC2 chr19 45451723 + Exonic hg19 SKCM TCGA-FS-A1Z4-06A 9 4 Out-of-frame Intra-chr q13.32 66054 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC68-APOC4 LRRC68 chr19 45596785 - APOC4 chr19 45448006 + Exonic hg19 UCS TCGA-NA-A4R1-01A 45 13 Out-of-frame Intra-chr q13.32 66055 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC68-BCAM LRRC68 chr19 45596785 - BCAM chr19 45314482 + Exonic hg19 ACC TCGA-OR-A5KY-01A 47 20 Out-of-frame Intra-chr q13.32 66056 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC68-CACNG1 LRRC68 chr19 45596785 - CACNG1 chr17 65050112 + Exonic hg19 LUAD TCGA-86-8673-01A 23 7 Out-of-frame Inter-chr q24.2 66057 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC68-CEACAM19 LRRC68 chr19 45596785 - CEACAM19 chr19 45185839 + Exonic hg19 OV TCGA-OY-A56Q-01A 47 248 Out-of-frame Intra-chr q13.31 66058 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC68-CLASRP LRRC68 chr19 45596785 - CLASRP chr19 45570595 + Exonic hg19 OV TCGA-VG-A8LO-01A 8 40 Out-of-frame Intra-chr q13.32 66059 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC68-CLPTM1 LRRC68 chr19 45596785 - CLPTM1 chr19 45465220 + Exonic hg19 SKCM TCGA-FS-A1Z4-06A 3 1 Out-of-frame Intra-chr q13.32 66060 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC68-DAAM2 LRRC68 chr19 45596785 - DAAM2 chr6 39864588 + Exonic hg19 ESCA TCGA-L5-A4ON-01A 2 5 Out-of-frame Inter-chr p21.2 66061 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC68-GEMIN7 LRRC68 chr19 45596785 - GEMIN7 chr19 45593365 + Exonic hg19 SARC TCGA-X6-A8C2-01A 4 2 Out-of-frame Intra-chr q13.32 66062 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC68-GLTSCR1 LRRC68 chr19 45596785 - GLTSCR1 chr19 48173700 + Exonic hg19 CESC TCGA-C5-A2M1-01A 8 7 Out-of-frame Intra-chr Tumor suppressor gene 66063 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC68-IGSF23 LRRC68 chr19 45596785 - IGSF23 chr19 45127000 + Exonic hg19 OV TCGA-13-1403-01A 3 3 Out-of-frame Intra-chr q13.31 66064 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC68-PAFAH1B3 LRRC68 chr19 45596785 - PAFAH1B3 chr19 42806477 - Exonic hg19 OV TCGA-24-1558-01A 11 9 Out-of-frame Intra-chr q13.2 66065 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC68-RHPN2 LRRC68 chr19 45596785 - RHPN2 chr19 33535270 - Exonic hg19 OV TCGA-24-1558-01A 32 7 Out-of-frame Intra-chr q13.11 66066 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC68-RTN2 LRRC68 chr19 45646891 - RTN2 chr19 45989371 - Exonic hg19 ESCA TCGA-JY-A6FD-01A 7 17 Out-of-frame Intra-chr q13.32 66067 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC68-ZNF224 LRRC68 chr19 45596785 - ZNF224 chr19 44610549 + Exonic hg19 HNSC TCGA-DQ-5629-01A 3 1 Out-of-frame Intra-chr q13.31 Transcription factor 66068 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC68-ZNF225 LRRC68 chr19 45596785 - ZNF225 chr19 44619913 + Exonic hg19 HNSC TCGA-DQ-5629-01A 5 1 Out-of-frame Intra-chr q13.31 Tumor suppressor gene Transcription factor 66069 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC68-ZNF383 LRRC68 chr19 45596785 - ZNF383 chr19 37721311 + Exonic hg19 SARC TCGA-QQ-A8VF-01A 27 20 Out-of-frame Intra-chr q13.12 Transcription factor 66070 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC7-RRP15 LRRC7 chr1 70034324 - RRP15 chr1 218504290 + Exonic hg19 PRAD TCGA-HC-8257-01A 20 8 5'UTR-CDS Intra-chr p31.1 q41 Seq+ 66071 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC8A-CCBL1 LRRC8A chr9 131671600 - CCBL1 chr9 131607690 - Exonic hg19 BRCA TCGA-B6-A0RE-01A 2 2 CDS-5'UTR Intra-chr q34.11 66072 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC8A-GON4L LRRC8A chr9 131648400 - GON4L chr1 155774932 - Exonic hg19 BRCA TCGA-E2-A158-01A 9 8 5'UTR-CDS Inter-chr q34.11 q22 Seq+ 66073 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC8A-MEN1 LRRC8A chr9 131644529 - MEN1 chr11 64578377 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 3 5 5'UTR-5'UTR Inter-chr q34.11 q13.1 Oncogene Tumor suppressor gene Seq+ 66074 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC8D-C1orf168 LRRC8D chr1 90309341 - C1orf168 chr1 57233611 - Exonic hg19 BRCA TCGA-A8-A09G-01A 40 26 5'UTR-CDS Intra-chr p22.2 p32.2 Seq+ 66075 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC8D-PALMD LRRC8D chr1 90309341 - PALMD chr1 100127875 + Exonic hg19 SKCM TCGA-FR-A7UA-06A 2 5 5'UTR-CDS Intra-chr p22.2 p21.2 Seq+ 66076 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC8D-TMEM9 LRRC8D chr1 90286850 - TMEM9 chr1 201115976 - Exonic hg19 LUSC TCGA-NC-A5HL-01A 17 11 5'UTR-CDS Intra-chr p22.2 q32.1 Seq+ 66077 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRC8E-EVI5L LRRC8E chr19 7960626 - EVI5L chr19 7911382 + Exonic hg19 LUAD TCGA-38-4630-01A 2 1 CDS-5'UTR Intra-chr p13.2 p13.2 66078 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRCC1-FAM164A LRRCC1 chr8 86025334 - FAM164A chr8 79627456 + Exonic hg19 PRAD TCGA-CH-5765-01A 6 4 Out-of-frame Intra-chr q21.2 66079 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRCC1-GTPBP5 LRRCC1 chr8 86025334 - GTPBP5 chr20 60768472 + Exonic hg19 LUAD TCGA-78-7153-01A 5 1 CDS-5'UTR Inter-chr q21.2 66080 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRFIP1-CARD10 LRRFIP1 chr2 238668848 - CARD10 chr22 37912305 - Exonic hg19 THYM TCGA-XU-A92V-01A 2 2 In-Frame Inter-chr q37.3 q13.1 Seq+ 66081 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRFIP1-DBF4B LRRFIP1 chr2 238536383 - DBF4B chr17 42800248 + Exonic hg19 SKCM TCGA-DA-A1IA-06A 14 15 Out-of-frame Inter-chr q37.3 q21.31 Seq+ 66082 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRFIP1-WDR81 LRRFIP1 chr2 238617273 - WDR81 chr17 1635619 + Exonic hg19 READ TCGA-G5-6572-02A 2 2 Out-of-frame Inter-chr q37.3 66083 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRFIP2-DEPTOR LRRFIP2 chr3 37216030 - DEPTOR chr8 121061815 + Exonic hg19 SKCM TCGA-EE-A29V-06A 53 51 5'UTR-CDS Inter-chr p22.2 q24.12 Seq+ 66084 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRFIP2-EPHA3 LRRFIP2 chr3 37190385 - EPHA3 chr3 89521614 + Exonic hg19 STAD TCGA-BR-4363-01A 4 9 Out-of-frame Intra-chr p22.2 p11.1 Oncogene Tumor suppressor gene 66085 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRFIP2-SETD2 LRRFIP2 chr3 37216030 - SETD2 chr3 47088111 - Exonic hg19 LIHC TCGA-CC-5258-01A 7 8 5'UTR-CDS Intra-chr p22.2 p21.31 Oncogene Tumor suppressor gene Seq+ 66086 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRK1-ADAMTS17 LRRK1 chr15 101529603 - ADAMTS17 chr15 100591936 - Exonic hg19 BRCA TCGA-A2-A4RW-01A 24 19 In-Frame Intra-chr q26.3 TKL:LRRK q26.3 Seq+ 66087 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRK2-GXYLT1 LRRK2 chr12 40619442 - GXYLT1 chr12 42512973 - Exonic hg19 LGG TCGA-DU-A5TY-01A 4 8 Out-of-frame Intra-chr q12 TKL:LRRK q12 Seq+ 66088 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRRN4-MCM8 LRRN4 chr20 6031425 - MCM8 chr20 5974152 + Exonic hg19 LUAD TCGA-75-6205-01A 6 4 In-Frame Intra-chr p12.3 p12.3 Seq+ 66089 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRSAM1-DENND1A LRSAM1 chr9 130214363 - DENND1A chr9 126220176 - Exonic hg19 BRCA TCGA-E2-A159-01A 13 1 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 66090 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRSAM1-GARNL3 LRSAM1 chr9 130221350 - GARNL3 chr9 130152920 + Exonic hg19 LUSC TCGA-90-6837-01A 15 3 Out-of-frame Intra-chr q33.3 q33.3 66091 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRSAM1-GARNL3 LRSAM1 chr9 130224652 - GARNL3 chr9 130073915 + Exonic hg19 BLCA TCGA-E7-A85H-01A 2 1 In-Frame Intra-chr q33.3 q33.3 66092 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRTOMT-NFIC LRTOMT chr11 71800211 - NFIC chr19 3449012 + Exonic hg19 BRCA TCGA-A8-A097-01A 7 4 In-Frame Inter-chr q13.4 p13.3 Transcription factor Seq+ 66093 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LRTOMT-UVRAG LRTOMT chr11 71791931 - UVRAG chr11 75718578 + Exonic hg19 BRCA TCGA-A8-A08S-01A 6 12 5'UTR-CDS Intra-chr q13.4 q13.5 Tumor suppressor gene Seq+ 66094 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LSAMP-C3orf70 LSAMP chr3 115805171 - C3orf70 chr3 184801351 - Exonic hg19 BRCA TCGA-BH-A204-01A 3 2 In-Frame Intra-chr q13.31 Tumor suppressor gene q27.2 66095 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LSAMP-CCDC58 LSAMP chr3 117716029 - CCDC58 chr3 122081874 - Exonic hg19 SARC TCGA-SG-A6Z4-01A 3 1 5'UTR-CDS Intra-chr q13.31 Tumor suppressor gene q21.1 66096 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LSAMP-COL4A5 LSAMP chr3 115738362 - COL4A5 chrX 107811989 + Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 9 4 In-Frame Inter-chr q13.31 Tumor suppressor gene q22.3 Seq+ 66097 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LSAMP-GAP43 LSAMP chr3 117716029 - GAP43 chr3 115394860 + Exonic hg19 BRCA TCGA-AR-A2LR-01A 2 2 5'UTR-CDS Intra-chr q13.31 Tumor suppressor gene q13.31 66098 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LSAMP-IGSF11 LSAMP chr3 117716029 - IGSF11 chr3 118624565 - Exonic hg19 SKCM TCGA-YD-A9TA-06A 2 2 5'UTR-CDS Intra-chr q13.31 Tumor suppressor gene q13.32 66099 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LSM1-WHSC1L1 LSM1 chr8 38033793 - WHSC1L1 chr8 38196125 - Exonic hg19 LUSC TCGA-33-6738-01A 11 6 Out-of-frame Intra-chr p11.23 p11.23 Tumor suppressor gene Seq+ 66100 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LSM14A-ACTN4 LSM14A chr19 34663668 - ACTN4 chr19 39191240 + Exonic hg19 BRCA TCGA-AQ-A0Y5-01A 187 116 Out-of-frame Intra-chr Seq+ 66101 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LSM14A-KNDC1 LSM14A chr19 34663668 - KNDC1 chr10 134996848 + Exonic hg19 CESC TCGA-C5-A907-01A 21 4 Out-of-frame Inter-chr q26.3 Seq+ 66102 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LSM14A-TDRD12 LSM14A chr19 34706566 - TDRD12 chr19 33263659 + Exonic hg19 PRAD TCGA-V1-A9O5-06A 51 35 In-Frame Intra-chr q13.11 Seq+ 66103 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LSM14A-TMTC2 LSM14A chr19 34699956 - TMTC2 chr12 83525989 + Exonic hg19 SARC TCGA-DX-A7EI-01A 229 234 Out-of-frame Inter-chr q21.31 Seq+ 66104 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LSM4-AD001527.1 LSM4 chr19 18433828 - AD001527.1 chr19 36602271 + Exonic hg19 SARC TCGA-3B-A9HX-01A 142 27 Out-of-frame Intra-chr p13.11 q13.12 66105 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LSM4-ADRBK1 LSM4 chr19 18433828 - ADRBK1 chr11 67046671 + Exonic hg19 SKCM TCGA-D3-A8GB-06A 7 56 Out-of-frame Inter-chr p13.11 Seq+ 66106 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LSP1-SYT8 LSP1 chr11 1874427 - SYT8 chr11 1856327 + Exonic hg19 ACC TCGA-OR-A5J1-01A 10 5 Out-of-frame Intra-chr p15.5 p15.5 Seq+ 66107 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LSP1-SYT8 LSP1 chr11 1892642 - SYT8 chr11 1849772 + Exonic hg19 ACC TCGA-OR-A5J7-01A 69 44 Out-of-frame Intra-chr p15.5 p15.5 Seq+ 66108 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LSR-HDLBP LSR chr19 35758865 - HDLBP chr2 242202277 - Exonic hg19 COAD TCGA-CK-6746-01A 2 2 Out-of-frame Inter-chr q13.12 q37.3 66109 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LSR-NLRP2 LSR chr19 35741562 - NLRP2 chr19 55481367 + Exonic hg19 ESCA TCGA-L5-A891-01A 5 13 CDS-5'UTR Intra-chr q13.12 Seq+ 66110 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LSS-EIF4ENIF1 LSS chr21 47625750 - EIF4ENIF1 chr22 31859953 - Exonic hg19 SARC TCGA-IF-A4AK-01A 4 3 Out-of-frame Inter-chr q22.3 q12.2 Seq+ 66111 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTA4H-BTBD11 LTA4H chr12 96396738 - BTBD11 chr12 107914264 + Exonic hg19 SARC TCGA-DX-A3U5-01A 59 34 Out-of-frame Intra-chr q23.1 q23.3 Seq+ 66112 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTA4H-STAB2 LTA4H chr12 96429139 - STAB2 chr12 104076983 + Exonic hg19 SARC TCGA-3B-A9HL-01A 2 1 In-Frame Intra-chr q23.1 q23.3 66113 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTBP1-BIRC6 LTBP1 chr2 33246273 - BIRC6 chr2 32631567 + Exonic hg19 LUSC TCGA-22-5491-01A 3 1 In-Frame Intra-chr p22.3 p22.3 Seq+ 66114 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTBP1-BIRC6 LTBP1 chr2 33624424 - BIRC6 chr2 32820101 + Exonic hg19 LUSC TCGA-58-8390-01A 2 1 3'UTR-CDS Intra-chr p22.3 p22.3 Seq+ 66115 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTBP1-BIRC6 LTBP1 chr2 33624426 - BIRC6 chr2 32820101 + Exonic hg19 LUSC TCGA-94-8491-01A 6 7 3'UTR-CDS Intra-chr p22.3 p22.3 Seq+ 66116 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTBP1-BIRC6 LTBP1 chr2 33246273 - BIRC6 chr2 32631567 + Exonic hg19 LAML TCGA-AB-2931-03A 8 10 In-Frame Intra-chr p22.3 p22.3 Seq+ 66117 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTBP1-BIRC6 LTBP1 chr2 33246273 - BIRC6 chr2 32631567 + Exonic hg19 BRCA TCGA-AR-A24N-01A 37 7 In-Frame Intra-chr p22.3 p22.3 Seq+ 66118 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTBP1-BIRC6 LTBP1 chr2 33246273 - BIRC6 chr2 32631567 + Exonic hg19 PRAD TCGA-EJ-5496-01A 4 2 In-Frame Intra-chr p22.3 p22.3 Seq+ 66119 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTBP1-BIRC6 LTBP1 chr2 33447218 - BIRC6 chr2 32770710 + Exonic hg19 LUSC TCGA-L3-A524-01A 4 1 In-Frame Intra-chr p22.3 p22.3 Seq+ 66120 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTBP1-CDH23 LTBP1 chr2 33447218 - CDH23 chr10 73269839 + Exonic hg19 BRCA TCGA-AN-A0XN-01A 4 1 In-Frame Inter-chr p22.3 q22.1 Seq+ 66121 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTBP1-PLB1 LTBP1 chr2 33413918 - PLB1 chr2 28771727 + Exonic hg19 BLCA TCGA-DK-A3IK-01A 10 8 In-Frame Intra-chr p22.3 p23.2 Seq+ 66122 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTBP1-TTC27 LTBP1 chr2 33540336 - TTC27 chr2 32855590 + Exonic hg19 UCEC TCGA-AJ-A3I9-01A 2 1 In-Frame Intra-chr p22.3 p22.3 Seq+ 66123 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTBP1-TTC27 LTBP1 chr2 33413918 - TTC27 chr2 32983359 + Exonic hg19 BRCA TCGA-BH-A0RX-01A 2 2 In-Frame Intra-chr p22.3 p22.3 Seq+ 66124 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTBP1-UCMA LTBP1 chr2 33174012 - UCMA chr10 13264200 - Exonic hg19 SARC TCGA-DX-A3U5-01A 4 2 In-Frame Inter-chr p22.3 p13 66125 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTBP1-YIPF4 LTBP1 chr2 33413918 - YIPF4 chr2 32526451 + Exonic hg19 STAD TCGA-BR-A4QI-01A 9 103 In-Frame Intra-chr p22.3 p22.3 Seq+ 66126 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTBP1-ZDHHC2 LTBP1 chr2 33540336 - ZDHHC2 chr8 17042298 + Exonic hg19 BRCA TCGA-AR-A0TU-01A 3 4 In-Frame Inter-chr p22.3 p22 Tumor suppressor gene Seq+ 66127 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTBP3-CERS3 LTBP3 chr11 65321172 - CERS3 chr15 100943070 - Exonic hg19 HNSC TCGA-BA-6873-01A 2 3 In-Frame Inter-chr q13.1 q26.3 Seq+ 66128 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTBP4-MYO1B LTBP4 chr19 41120352 - MYO1B chr2 192278774 + Exonic hg19 BRCA TCGA-EW-A1PH-01A 23 24 Out-of-frame Inter-chr q13.2 q32.3 Seq+ 66129 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTBP4-SUPT16H LTBP4 chr19 41135722 - SUPT16H chr14 21829491 - Exonic hg19 LUSC TCGA-L3-A524-01A 2 4 Out-of-frame Inter-chr q13.2 q11.2 66130 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTBR-PRSS3 LTBR chr12 6495610 - PRSS3 chr9 33796641 + Exonic hg19 KIRP TCGA-P4-AAVM-01A 145 159 In-Frame Inter-chr p13.31 p13.3 Seq+ 66131 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTF-C7 LTF chr3 46477510 - C7 chr5 40954982 + Exonic hg19 PRAD TCGA-G9-6356-01A 2 19 Out-of-frame Inter-chr p21.31 Oncogene Tumor suppressor gene Transcription factor p13.1 Tumor suppressor gene 66132 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTF-CFB LTF chr3 46477510 - CFB chr6 31913427 + Exonic hg19 PRAD TCGA-HC-7079-01A 5 1 Out-of-frame Inter-chr p21.31 Oncogene Tumor suppressor gene Transcription factor 66133 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTF-CFB LTF chr3 46477510 - CFB chr6 31913427 + Exonic hg19 BRCA TCGA-PE-A5DE-01A 2 1 Out-of-frame Inter-chr p21.31 Oncogene Tumor suppressor gene Transcription factor 66134 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTF-CHD1 LTF chr3 46477510 - CHD1 chr5 98219587 - Exonic hg19 BRCA TCGA-A7-A26G-01A 2 1 Out-of-frame Inter-chr p21.31 Oncogene Tumor suppressor gene Transcription factor q21.1 Tumor suppressor gene 66135 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTF-FOXP1 LTF chr3 46477510 - FOXP1 chr3 71007472 - Exonic hg19 LUAD TCGA-44-7671-01A 2 3 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene Transcription factor p13 Oncogene Tumor suppressor gene Transcription factor 66136 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTF-NCALD LTF chr3 46477510 - NCALD chr8 102813898 - Exonic hg19 BRCA TCGA-AO-A1KO-01A 2 3 Out-of-frame Inter-chr p21.31 Oncogene Tumor suppressor gene Transcription factor q22.3 66137 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTF-SEC63 LTF chr3 46477510 - SEC63 chr6 108214782 - Exonic hg19 PRAD TCGA-H9-A6BX-01A 2 53 Out-of-frame Inter-chr p21.31 Oncogene Tumor suppressor gene Transcription factor q21 66138 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTF-ZNFX1 LTF chr3 46477510 - ZNFX1 chr20 47863418 - Exonic hg19 LUSC TCGA-85-8355-01A 2 22 Out-of-frame Inter-chr p21.31 Oncogene Tumor suppressor gene Transcription factor q13.13 66139 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTN1-RWDD2B LTN1 chr21 30365085 - RWDD2B chr21 30380942 - Exonic hg19 BRCA TCGA-B6-A0IJ-01A 6 2 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 66140 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LTV1-ATG5 LTV1 chr6 144167361 - ATG5 chr6 106649964 - Exonic hg19 BRCA TCGA-E9-A248-01A 235 193 In-Frame Intra-chr q24.2 q21 Seq+ 66141 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LUC7L-AXIN1 LUC7L chr16 249061 - AXIN1 chr16 364683 - Exonic hg19 OV TCGA-13-1511-01A 2 2 Out-of-frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Seq+ 66142 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LUC7L-AXIN1 LUC7L chr16 277241 - AXIN1 chr16 364683 - Exonic hg19 LUSC TCGA-98-A53A-01A 41 16 Out-of-frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Seq+ 66143 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LUC7L-AXIN1 LUC7L chr16 270648 - AXIN1 chr16 364683 - Exonic hg19 LGG TCGA-DU-6407-02B 42 30 Out-of-frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Seq+ 66144 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LUC7L-CORIN LUC7L chr16 249061 - CORIN chr4 47667280 - Exonic hg19 BLCA TCGA-K4-A83P-01A 7 6 Out-of-frame Inter-chr p13.3 p12 Seq+ 66145 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LUC7L-SLC27A5 LUC7L chr16 270648 - SLC27A5 chr19 59012777 - Exonic hg19 BLCA TCGA-4Z-AA87-01A 15 19 Out-of-frame Inter-chr p13.3 q13.43 Seq+ 66146 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LUC7L-STXBP1 LUC7L chr16 256003 - STXBP1 chr9 130425484 + Exonic hg19 UCEC TCGA-A5-A7WK-01A 38 30 In-Frame Inter-chr p13.3 q34.11 Seq+ 66147 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LUC7L2-ETV1 LUC7L2 chr7 139045068 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-CH-5745-01A 22 8 In-Frame Intra-chr q34 p21.2 Oncogene Transcription factor Seq+ 66148 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LUC7L2-ETV1 LUC7L2 chr7 139045068 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-EJ-5510-01A 67 45 In-Frame Intra-chr q34 p21.2 Oncogene Transcription factor Seq+ 66149 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LUC7L2-IGSF22 LUC7L2 chr7 139092096 - IGSF22 chr11 18738547 - Exonic hg19 SKCM TCGA-WE-A8ZM-06A 24 11 Out-of-frame Inter-chr q34 p15.1 Seq+ 66150 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LUC7L2-JAKMIP1 LUC7L2 chr7 139045068 - JAKMIP1 chr4 6114724 - Exonic hg19 BRCA TCGA-D8-A27R-01A 6 9 5'UTR-5'UTR Inter-chr q34 p16.1 Seq+ 66151 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LUC7L2-MRPS33 LUC7L2 chr7 139060902 - MRPS33 chr7 140710460 - Exonic hg19 PRAD TCGA-YJ-A8SW-01A 20 14 CDS-5'UTR Intra-chr q34 q34 Seq+ 66152 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LUC7L2-SLC25A13 LUC7L2 chr7 139026268 - SLC25A13 chr7 95906650 - Exonic hg19 STAD TCGA-CG-4477-01A 9 1 In-Frame Intra-chr q34 q21.3 Seq+ 66153 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LUC7L3-ABCC3 LUC7L3 chr17 48822174 - ABCC3 chr17 48750332 + Exonic hg19 BRCA TCGA-AO-A128-01A 2 2 In-Frame Intra-chr q21.33 q21.33 Seq+ 66154 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LUC7L3-ABCC3 LUC7L3 chr17 48797192 - ABCC3 chr17 48744915 + Exonic hg19 STAD TCGA-BR-7901-01A 3 23 In-Frame Intra-chr q21.33 q21.33 Seq+ 66155 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LUC7L3-ACSF2 LUC7L3 chr17 48797192 - ACSF2 chr17 48551863 + Exonic hg19 UCEC TCGA-AX-A3G4-01A 2 1 In-Frame Intra-chr q21.33 q21.33 66156 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LUC7L3-C17orf64 LUC7L3 chr17 48814387 - C17orf64 chr17 58506723 + Exonic hg19 BRCA TCGA-BH-A18R-01A 136 154 Out-of-frame Intra-chr q21.33 q23.2 Seq+ 66157 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LUC7L3-CACNA1G LUC7L3 chr17 48819092 - CACNA1G chr17 48652904 + Exonic hg19 STAD TCGA-VQ-A92D-01A 3 47 In-Frame Intra-chr q21.33 q21.33 Seq+ 66158 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LUC7L3-CEP250 LUC7L3 chr17 48824063 - CEP250 chr20 34078463 + Exonic hg19 UCS TCGA-N8-A56S-01A 17 9 Out-of-frame Inter-chr q21.33 q11.22 Seq+ 66159 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LUC7L3-IKZF3 LUC7L3 chr17 48797192 - IKZF3 chr17 37949186 - Exonic hg19 BRCA TCGA-E2-A1LB-01A 39 17 Out-of-frame Intra-chr q21.33 q21.1 Tumor suppressor gene Transcription factor Seq+ 66160 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LUC7L3-MYCBPAP LUC7L3 chr17 48797192 - MYCBPAP chr17 48593931 + Exonic hg19 UCS TCGA-N8-A4PM-01A 7 3 Out-of-frame Intra-chr q21.33 q21.33 Seq+ 66161 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LUZP1-IL28RA LUZP1 chr1 23495259 - IL28RA chr1 24496091 - Exonic hg19 STAD TCGA-BR-8060-01A 2 2 5'UTR-CDS Intra-chr p36.12 66162 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LUZP1-NEDD4L LUZP1 chr1 23417683 - NEDD4L chr18 55919233 + Exonic hg19 BLCA TCGA-CU-A0YO-01A 4 1 In-Frame Inter-chr p36.12 q21.31 Tumor suppressor gene Seq+ 66163 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LUZP1-SORL1 LUZP1 chr1 23495259 - SORL1 chr11 121340716 + Exonic hg19 LGG TCGA-TM-A84J-01A 6 12 5'UTR-CDS Inter-chr p36.12 q24.1 Seq+ 66164 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LY6E-LY6D LY6E chr8 144103826 - LY6D chr8 143868008 - Exonic hg19 HNSC TCGA-F7-A623-01A 2 1 3'UTR-5'UTR Intra-chr q24.3 66165 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LY6E-PLEKHB2 LY6E chr8 144103826 - PLEKHB2 chr2 131876464 + Exonic hg19 UVM TCGA-VD-AA8O-01A 2 2 Out-of-frame Inter-chr q21.1 66166 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LY75-CD302-CCDC148 LY75-CD302 chr2 160742931 - CCDC148 chr2 159107424 - Exonic hg19 LUAD TCGA-75-7031-01A 4 1 Out-of-frame Intra-chr q24.2 q24.1 66167 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYN-NTRK3 LYN chr8 56866543 - NTRK3 chr15 88576276 - Exonic hg19 HNSC TCGA-CN-6997-01A 95 69 In-Frame Inter-chr q12.1 TK:Src q25.3 Oncogene Tumor suppressor gene Seq+ 66168 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYN-VPS13B LYN chr8 56792662 - VPS13B chr8 100513915 + Exonic hg19 COAD TCGA-A6-5666-01A 6 2 5'UTR-CDS Intra-chr q12.1 TK:Src q22.2 Seq+ 66169 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYPD1-NCKAP5 LYPD1 chr2 133425973 - NCKAP5 chr2 133489624 - Exonic hg19 HNSC TCGA-BA-6872-01A 6 5 In-Frame Intra-chr q21.2 q21.2 Seq+ 66170 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYPD3-CCT5 LYPD3 chr19 43964946 - CCT5 chr5 10250033 + Exonic hg19 CESC TCGA-FU-A3NI-01A 2 50 3'UTR-5'UTR Inter-chr q13.31 p15.2 66171 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYPD6B-LRBA LYPD6B chr2 149975677 - LRBA chr4 151719294 - Exonic hg19 PRAD TCGA-EJ-7782-01A 13 11 5'UTR-CDS Inter-chr q23.2 q31.3 Seq+ 66172 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYPD6B-MBD5 LYPD6B chr2 149895315 - MBD5 chr2 149225910 + Exonic hg19 LUSC TCGA-92-8064-01A 2 6 5'UTR-CDS Intra-chr q23.2 q23.1 66173 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYRM4-EYS LYRM4 chr6 5260881 - EYS chr6 66045039 - Exonic hg19 LIHC TCGA-CC-A8HV-01A 2 1 Out-of-frame Intra-chr p25.1 q12 Seq+ 66174 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYRM4-FARS2 LYRM4 chr6 5260881 - FARS2 chr6 5771524 + Exonic hg19 SKCM TCGA-D3-A2J9-06A 73 26 In-Frame Intra-chr p25.1 p25.1 Seq+ 66175 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYRM4-FARS2 LYRM4 chr6 5216851 - FARS2 chr6 5613402 + Exonic hg19 CESC TCGA-LP-A5U2-01A 2 4 In-Frame Intra-chr p25.1 p25.1 Seq+ 66176 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYSMD1-MFSD4 LYSMD1 chr1 151138223 - MFSD4 chr1 205566908 + Exonic hg19 PRAD TCGA-J9-A52C-01A 2 2 Out-of-frame Intra-chr q21.3 66177 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYSMD2-MYO5A LYSMD2 chr15 52029547 - MYO5A chr15 52613706 - Exonic hg19 LIHC TCGA-NI-A8LF-01A 4 2 In-Frame Intra-chr q21.2 q21.2 Seq+ 66178 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYSMD2-SCG3 LYSMD2 chr15 52029547 - SCG3 chr15 52011605 + Exonic hg19 LUSC TCGA-63-A5MR-01A 5 4 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 66179 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYSMD2-SLC24A5 LYSMD2 chr15 52029547 - SLC24A5 chr15 48426455 + Exonic hg19 BRCA TCGA-AN-A049-01A 3 1 Out-of-frame Intra-chr q21.2 q21.1 66180 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYST-DISC1 LYST chr1 235880012 - DISC1 chr1 231930988 + Exonic hg19 HNSC TCGA-CQ-6228-01A 5 3 Out-of-frame Intra-chr q42.3 q42.2 Seq+ 66181 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYST-NARS2 LYST chr1 236030143 - NARS2 chr11 78177059 - Exonic hg19 LGG TCGA-TM-A84I-01A 9 41 5'UTR-CDS Inter-chr q42.3 q14.1 Seq+ 66182 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYST-NID1 LYST chr1 235933460 - NID1 chr1 236148805 - Exonic hg19 LUAD TCGA-55-7576-01A 5 1 In-Frame Intra-chr q42.3 q42.3 Seq+ 66183 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYST-NID1 LYST chr1 235950500 - NID1 chr1 236212289 - Exonic hg19 SKCM TCGA-EE-A2MS-06A 64 26 Out-of-frame Intra-chr q42.3 q42.3 Seq+ 66184 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYST-SLC3A2 LYST chr1 236046487 - SLC3A2 chr11 62643221 + Exonic hg19 SKCM TCGA-D3-A1Q3-06A 2 33 Out-of-frame Inter-chr q42.3 q12.3 66185 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYZ-ANXA1 LYZ chr12 69748014 - ANXA1 chr9 75772570 + Exonic hg19 LAML TCGA-AB-2826-03A 2 13 3'UTR-5'UTR Inter-chr q15 q21.13 Tumor suppressor gene 66186 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYZ-ANXA1 LYZ chr12 69748014 - ANXA1 chr9 75772570 + Exonic hg19 LAML TCGA-AB-2837-03A 2 53 3'UTR-5'UTR Inter-chr q15 q21.13 Tumor suppressor gene 66187 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYZ-BIRC6 LYZ chr12 69748014 - BIRC6 chr2 32820101 + Exonic hg19 LUSC TCGA-90-A4EE-01A 2 26 3'UTR-CDS Inter-chr q15 p22.3 66188 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYZ-DDX21 LYZ chr12 69748014 - DDX21 chr10 70723858 + Exonic hg19 LAML TCGA-AB-2835-03A 3 81 3'UTR-CDS Inter-chr q15 q22.1 66189 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYZ-DDX21 LYZ chr12 69748014 - DDX21 chr10 70723858 + Exonic hg19 COAD TCGA-G4-6299-01A 2 108 3'UTR-CDS Inter-chr q15 q22.1 66190 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYZ-NDUFV1 LYZ chr12 69748014 - NDUFV1 chr11 67375697 + Exonic hg19 COAD TCGA-F4-6570-01A 2 6 3'UTR-CDS Inter-chr q15 q13.2 66191 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYZ-STAT6 LYZ chr12 69748014 - STAT6 chr12 57496773 - Exonic hg19 LAML TCGA-AB-2848-03A 2 19 3'UTR-3'UTR Intra-chr q15 q13.3 Transcription factor 66192 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYZ-STAT6 LYZ chr12 69748014 - STAT6 chr12 57496773 - Exonic hg19 LAML TCGA-AB-2873-03A 2 49 3'UTR-3'UTR Intra-chr q15 q13.3 Transcription factor 66193 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYZ-SUPT16H LYZ chr12 69748014 - SUPT16H chr14 21829491 - Exonic hg19 LUAD TCGA-97-7552-01A 2 4 3'UTR-CDS Inter-chr q15 q11.2 66194 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq LYZ-TYK2 LYZ chr12 69748014 - TYK2 chr19 10491352 - Exonic hg19 LAML TCGA-AB-2954-03A 2 20 3'UTR-5'UTR Inter-chr q15 p13.2 TK:JakA 66195 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MACF1-AKIRIN1 MACF1 chr1 39571389 - AKIRIN1 chr1 39463843 + Exonic hg19 HNSC TCGA-CV-7235-01A 23 17 Out-of-frame Intra-chr p34.3 p34.3 Seq+ 66196 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MACF1-ALB MACF1 chr1 39916883 - ALB chr4 74270034 + Exonic hg19 LIHC TCGA-DD-A11C-01A 2 1 Out-of-frame Inter-chr p34.3 q13.3 66197 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MACF1-BRAF MACF1 chr1 39896580 - BRAF chr7 140487384 - Exonic hg19 THCA TCGA-DE-A0Y2-01A 163 154 In-Frame Inter-chr p34.3 q34 TKL:RAF Oncogene Seq+ 66198 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MACF1-FAF1 MACF1 chr1 39893286 - FAF1 chr1 51061888 - Exonic hg19 BRCA TCGA-E2-A10A-01A 36 28 In-Frame Intra-chr p34.3 p32.3 Seq+ 66199 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MACF1-FOXJ3 MACF1 chr1 39910507 - FOXJ3 chr1 42664901 - Exonic hg19 STAD TCGA-F1-A72C-01A 5 57 In-Frame Intra-chr p34.3 p34.2 Transcription factor Seq+ 66200 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MACF1-GRIK3 MACF1 chr1 39696915 - GRIK3 chr1 37307540 - Exonic hg19 BRCA TCGA-OK-A5Q2-01A 3 1 In-Frame Intra-chr p34.3 p34.3 66201 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MACF1-HDAC5 MACF1 chr1 39723700 - HDAC5 chr17 42195072 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 2 2 CDS-5'UTR Inter-chr p34.3 q21.31 Seq+ 66202 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MACF1-INADL MACF1 chr1 39571389 - INADL chr1 62613956 + Exonic hg19 BRCA TCGA-OL-A5RZ-01A 8 13 Out-of-frame Intra-chr p34.3 66203 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MACF1-INPP5B MACF1 chr1 39920769 - INPP5B chr1 38352676 - Exonic hg19 LUSC TCGA-33-4587-01A 77 36 In-Frame Intra-chr p34.3 p34.3 Seq+ 66204 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MACF1-PTPRU MACF1 chr1 39571389 - PTPRU chr1 29581787 + Exonic hg19 BRCA TCGA-A7-A4SD-01A 6 3 Out-of-frame Intra-chr p34.3 p35.3 66205 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MACF1-RHBDL2 MACF1 chr1 39571389 - RHBDL2 chr1 39385009 - Exonic hg19 LUSC TCGA-33-4587-01A 36 14 CDS-5'UTR Intra-chr p34.3 p34.3 Seq+ 66206 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MACF1-SHISA6 MACF1 chr1 39723700 - SHISA6 chr17 11282731 + Exonic hg19 SARC TCGA-X6-A8C3-01A 8 5 Out-of-frame Inter-chr p34.3 p12 Seq+ 66207 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MACROD1-BAD MACROD1 chr11 63918711 - BAD chr11 64039275 - Exonic hg19 SKCM TCGA-ER-A19T-06A 38 20 In-Frame Intra-chr q13.1 q13.1 Seq+ 66208 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MACROD1-BAD MACROD1 chr11 63918711 - BAD chr11 64051848 - Exonic hg19 HNSC TCGA-T2-A6WZ-01A 10 7 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 66209 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MACROD1-NRXN2 MACROD1 chr11 63918711 - NRXN2 chr11 64375554 - Exonic hg19 BLCA TCGA-BT-A20W-01A 3 3 In-Frame Intra-chr q13.1 q13.1 Seq+ 66210 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MACROD1-PARP1 MACROD1 chr11 63918711 - PARP1 chr1 226590080 - Exonic hg19 UVM TCGA-VD-A8KO-01A 4 4 Out-of-frame Inter-chr q13.1 q42.12 Oncogene Tumor suppressor gene Seq+ 66211 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MACROD1-PITPNM1 MACROD1 chr11 63918711 - PITPNM1 chr11 67269557 - Exonic hg19 BRCA TCGA-AC-A4ZE-01A 167 126 In-Frame Intra-chr q13.1 q13.2 Seq+ 66212 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MACROD1-TCN1 MACROD1 chr11 63918711 - TCN1 chr11 59622308 - Exonic hg19 HNSC TCGA-CN-A49C-01A 361 207 In-Frame Intra-chr q13.1 q12.1 Seq+ 66213 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MACROD1-TRPT1 MACROD1 chr11 63918711 - TRPT1 chr11 63991813 - Exonic hg19 BRCA TCGA-A7-A13D-01A 4 2 In-Frame Intra-chr q13.1 q13.1 Seq+ 66214 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MACROD2-DCLK2 MACROD2 chr20 13983050 - DCLK2 chr4 151023630 + Exonic hg19 BRCA TCGA-C8-A1HN-01A 4 6 In-Frame Inter-chr p12.1 q31.23 CAMK:DCAMKL Seq+ 66215 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MACROD2-DGAT2 MACROD2 chr20 15210707 - DGAT2 chr11 75495663 + Exonic hg19 UCEC TCGA-B5-A1MS-01B 3 1 Out-of-frame Inter-chr p12.1 q13.5 Seq+ 66216 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MACROD2-SPTLC3 MACROD2 chr20 14066374 - SPTLC3 chr20 13090759 + Exonic hg19 SKCM TCGA-EE-A29D-06A 5 2 In-Frame Intra-chr p12.1 p12.1 Seq+ 66217 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MACROD2-SPTLC3 MACROD2 chr20 14474154 - SPTLC3 chr20 13071731 + Exonic hg19 PCPG TCGA-QT-A5XJ-01A 12 2 In-Frame Intra-chr p12.1 p12.1 Seq+ 66218 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MACROD2-TASP1 MACROD2 chr20 15480492 - TASP1 chr20 13610799 - Exonic hg19 LUAD TCGA-64-1681-01A 2 3 5'UTR-5'UTR Intra-chr p12.1 p12.1 Seq+ 66219 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MACROD2-UBOX5 MACROD2 chr20 13983050 - UBOX5 chr20 3104052 - Exonic hg19 LUSC TCGA-22-A5C4-01A 4 1 5'UTR-5'UTR Intra-chr p12.1 p13 Seq+ 66220 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAD1L1-RPA3 MAD1L1 chr7 2054137 - RPA3 chr7 7680806 - Exonic hg19 SARC TCGA-SI-AA8B-01A 3 1 CDS-5'UTR Intra-chr p22.3 Tumor suppressor gene p21.3 Seq+ 66221 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAD1L1-SERGEF MAD1L1 chr7 2188787 - SERGEF chr11 17809960 - Exonic hg19 HNSC TCGA-DQ-7591-01A 15 16 Out-of-frame Inter-chr p22.3 Tumor suppressor gene p15.1 Seq+ 66222 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MADD-ASIP MADD chr11 47346128 - ASIP chr20 32848171 + Exonic hg19 ACC TCGA-OR-A5J7-01A 9 2 CDS-5'UTR Inter-chr p11.2 Tumor suppressor gene q11.22 66223 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MADD-DDB2 MADD chr11 47317606 - DDB2 chr11 47254365 + Exonic hg19 CESC TCGA-C5-A7X5-01A 7 9 In-Frame Intra-chr p11.2 Tumor suppressor gene p11.2 Oncogene Tumor suppressor gene Seq+ 66224 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MADD-PIK3C2A MADD chr11 47333393 - PIK3C2A chr11 17158172 - Exonic hg19 BLCA TCGA-FD-A43N-01A 3 2 In-Frame Intra-chr p11.2 Tumor suppressor gene p15.1 66225 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAEA-TMEM71 MAEA chr4 1309388 - TMEM71 chr8 133697351 - Exonic hg19 BRCA TCGA-EW-A3U0-01A 22 13 Out-of-frame Inter-chr p16.3 q24.22 Seq+ 66226 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAF1-TMEM205 MAF1 chr8 145161367 - TMEM205 chr19 11456304 - Exonic hg19 PRAD TCGA-YL-A8SB-01A 22 13 CDS-5'UTR Inter-chr q24.3 p13.2 Seq+ 66227 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAFF-OSBP2 MAFF chr22 38598219 - OSBP2 chr22 31266416 + Exonic hg19 SARC TCGA-QQ-A5VA-01A 9 15 5'UTR-CDS Intra-chr q13.1 Transcription factor q12.2 Seq+ 66228 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAFF-RCOR1 MAFF chr22 38598219 - RCOR1 chr14 103148232 + Exonic hg19 ESCA TCGA-L5-A4OS-01A 3 20 5'UTR-CDS Inter-chr q13.1 Transcription factor q32.31 Seq+ 66229 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAFF-STK16 MAFF chr22 38598219 - STK16 chr2 220110618 + Exonic hg19 UCEC TCGA-FI-A3PX-01A 7 8 5'UTR-5'UTR Inter-chr q13.1 Transcription factor q35 Seq+ 66230 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAFK-KCTD5 MAFK chr7 1570534 - KCTD5 chr16 2752354 + Exonic hg19 ESCA TCGA-R6-A6Y0-01B 3 4 5'UTR-CDS Inter-chr p22.3 Transcription factor p13.3 Seq+ 66231 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAGED1-CYP4F2 MAGED1 chrX 51643392 - CYP4F2 chr19 16003392 - Exonic hg19 LUSC TCGA-22-A5C4-01A 19 9 CDS-5'UTR Inter-chr p11.22 p13.12 Seq+ 66232 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAGED2-MPHOSPH8 MAGED2 chrX 54842440 - MPHOSPH8 chr13 20233807 + Exonic hg19 BRCA TCGA-D8-A1XV-01A 2 1 Out-of-frame Inter-chr p11.21 q12.11 66233 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAGED2-NDUFV1 MAGED2 chrX 54842445 - NDUFV1 chr11 67375697 + Exonic hg19 BRCA TCGA-E9-A1R6-01A 2 10 Out-of-frame Inter-chr p11.21 q13.2 66234 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAGED2-SCAMP4 MAGED2 chrX 54842445 - SCAMP4 chr19 1917693 + Exonic hg19 PRAD TCGA-HC-7745-01A 2 7 3'UTR-CDS Inter-chr p11.21 p13.3 66235 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAGI1-DPH3 MAGI1 chr3 65607647 - DPH3 chr3 16302336 - Exonic hg19 HNSC TCGA-CR-5248-01A 3 4 Out-of-frame Intra-chr Oncogene p25.1 Seq+ 66236 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAGI1-LRIG1 MAGI1 chr3 66023671 - LRIG1 chr3 66512933 - Exonic hg19 PAAD TCGA-L1-A7W4-01A 2 1 Out-of-frame Intra-chr Oncogene Tumor suppressor gene 66237 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAGI1-MITF MAGI1 chr3 66023671 - MITF chr3 69998202 + Exonic hg19 THYM TCGA-ZB-A969-01A 18 8 Out-of-frame Intra-chr Oncogene p13 Oncogene Transcription factor Seq+ 66238 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAGI1-SUCLG2 MAGI1 chr3 66023671 - SUCLG2 chr3 67451275 - Exonic hg19 PRAD TCGA-ZG-A9KY-01A 6 6 Out-of-frame Intra-chr Oncogene p14.1 Seq+ 66239 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAGI1-TBC1D30 MAGI1 chr3 66023671 - TBC1D30 chr12 65221615 + Exonic hg19 PRAD TCGA-KK-A8II-01A 16 4 In-Frame Inter-chr Oncogene q14.3 Seq+ 66240 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAGI2-VWC2 MAGI2 chr7 79082336 - VWC2 chr7 49842307 + Exonic hg19 LGG TCGA-HT-7477-01B 3 1 Out-of-frame Intra-chr q21.11 p12.2 Seq+ 66241 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAGI3-ATF6 MAGI3 chr1 114092253 - ATF6 chr1 161829997 + Exonic hg19 BRCA TCGA-BH-A18H-01A 6 4 Out-of-frame Intra-chr p13.2 q23.3 Transcription factor Seq+ 66242 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAGI3-DENND5A MAGI3 chr1 113933971 - DENND5A chr11 9161401 - Exonic hg19 OV TCGA-24-1549-01A 2 1 In-Frame Inter-chr p13.2 p15.4 Seq+ 66243 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAGI3-NOTCH2 MAGI3 chr1 113933971 - NOTCH2 chr1 120529705 - Exonic hg19 BRCA TCGA-BH-A0W3-01A 3 6 In-Frame Intra-chr p13.2 p12 Oncogene Tumor suppressor gene Seq+ 66244 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAGI3-RAP1A MAGI3 chr1 113933971 - RAP1A chr1 112245958 + Exonic hg19 BRCA TCGA-A2-A04U-01A 2 5 Out-of-frame Intra-chr p13.2 p13.2 Tumor suppressor gene Seq+ 66245 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAGI3-SPAG17 MAGI3 chr1 113933971 - SPAG17 chr1 118550821 - Exonic hg19 BRCA TCGA-A7-A2KD-01A 3 2 In-Frame Intra-chr p13.2 p12 66246 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAK-ELOVL2 MAK chr6 10784657 - ELOVL2 chr6 10984139 - Exonic hg19 BRCA TCGA-JL-A3YW-01A 2 1 Out-of-frame Intra-chr p24.2 CMGC:RCK p24.2 66247 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAK-INTS12 MAK chr6 10791908 - INTS12 chr4 106604474 - Exonic hg19 PRAD TCGA-HC-8266-01A 13 9 Out-of-frame Inter-chr p24.2 CMGC:RCK q24 Seq+ 66248 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAK16-ANGPT2 MAK16 chr8 33347857 - ANGPT2 chr8 6390008 - Exonic hg19 BRCA TCGA-AR-A0TT-01A 10 15 In-Frame Intra-chr p12 p23.1 Seq+ 66249 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MALT1-NOL4 MALT1 chr18 56367823 - NOL4 chr18 31432999 - Exonic hg19 LUSC TCGA-77-8131-01A 2 1 In-Frame Intra-chr q21.32 Oncogene q12.1 66250 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAMDC2-MRPS28 MAMDC2 chr9 72746528 - MRPS28 chr8 80831383 - Exonic hg19 HNSC TCGA-BA-6868-01B 107 87 Out-of-frame Inter-chr q21.12 q21.13 Seq+ 66251 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAMDC2-TPD52 MAMDC2 chr9 72746528 - TPD52 chr8 80870670 - Exonic hg19 HNSC TCGA-BA-6868-01B 10 5 Out-of-frame Inter-chr q21.12 q21.13 Seq+ 66252 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAML2-ANKMY2 MAML2 chr11 96074547 - ANKMY2 chr7 16666803 - Exonic hg19 LGG TCGA-TM-A84I-01A 12 17 In-Frame Inter-chr q21 Oncogene p21.1 Seq+ 66253 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAML2-ATG13 MAML2 chr11 95825056 - ATG13 chr11 46665829 + Exonic hg19 LGG TCGA-E1-A7Z2-01A 9 8 CDS-5'UTR Intra-chr q21 Oncogene p11.2 Seq+ 66254 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAML2-BCAS4 MAML2 chr11 95825056 - BCAS4 chr20 49493023 + Exonic hg19 PCPG TCGA-WB-A81K-01A 10 6 In-Frame Inter-chr q21 Oncogene q13.13 Seq+ 66255 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAML2-CNTN5 MAML2 chr11 95825056 - CNTN5 chr11 99715584 + Exonic hg19 BRCA TCGA-D8-A27H-01A 5 9 Out-of-frame Intra-chr q21 Oncogene q22.1 Seq+ 66256 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAML2-YAP1 MAML2 chr11 96074547 - YAP1 chr11 102094353 + Exonic hg19 SKCM TCGA-EE-A17Z-06A 2 4 In-Frame Intra-chr q21 Oncogene q22.1 Tumor suppressor gene Seq+ 66257 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAML3-C6orf97 MAML3 chr4 140810511 - C6orf97 chr6 151869439 + Exonic hg19 SARC TCGA-HB-A3YV-01A 6 8 Out-of-frame Inter-chr q31.1 66258 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAML3-CLGN MAML3 chr4 141074014 - CLGN chr4 141327237 - Exonic hg19 BRCA TCGA-A2-A0SX-01A 9 6 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 66259 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAML3-FAM171A2 MAML3 chr4 141074014 - FAM171A2 chr17 42433956 - Exonic hg19 PCPG TCGA-WB-A80K-01A 31 24 Out-of-frame Inter-chr q31.1 q21.31 Seq+ 66260 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAML3-GPATCH8 MAML3 chr4 140810511 - GPATCH8 chr17 42483419 - Exonic hg19 PCPG TCGA-QR-A70H-01A 3 2 In-Frame Inter-chr q31.1 q21.31 Seq+ 66261 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAML3-GTSF1 MAML3 chr4 141074014 - GTSF1 chr12 54857081 - Exonic hg19 UCEC TCGA-AX-A3FW-01A 33 21 In-Frame Inter-chr q31.1 q13.13 Seq+ 66262 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAML3-MED24 MAML3 chr4 141074014 - MED24 chr17 38209888 - Exonic hg19 PCPG TCGA-PR-A5PH-01A 4 3 CDS-5'UTR Inter-chr q31.1 q21.1 Seq+ 66263 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAML3-SCOC MAML3 chr4 141074014 - SCOC chr4 141300275 + Exonic hg19 PRAD TCGA-2A-A8VV-01A 12 9 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 66264 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAMSTR-RASIP1 MAMSTR chr19 49222231 - RASIP1 chr19 49230687 - Exonic hg19 OV TCGA-13-1489-01A 2 57 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 66265 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAMSTR-RASIP1 MAMSTR chr19 49222231 - RASIP1 chr19 49230687 - Exonic hg19 OV TCGA-13-1489-02A 2 113 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 66266 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAN1A1-ARHGAP18 MAN1A1 chr6 119611848 - ARHGAP18 chr6 129939997 - Exonic hg19 BRCA TCGA-A2-A04W-01A 8 4 In-Frame Intra-chr q22.31 q22.33 Seq+ 66267 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAN1A1-FMNL3 MAN1A1 chr6 119611848 - FMNL3 chr12 50055832 - Exonic hg19 SARC TCGA-DX-A3LS-01A 5 7 Out-of-frame Inter-chr q22.31 q13.12 66268 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAN1A1-IFNGR2 MAN1A1 chr6 119623153 - IFNGR2 chr21 34851105 + Exonic hg19 BLCA TCGA-ZF-AA5P-01A 2 5 CDS-3'UTR Inter-chr q22.31 Seq+ 66269 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAN1A1-LCOR MAN1A1 chr6 119628061 - LCOR chr10 98667022 + Exonic hg19 BRCA TCGA-A2-A04W-01A 2 5 CDS-5'UTR Inter-chr q22.31 q24.1 Transcription factor Seq+ 66270 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAN1A1-MAGT1 MAN1A1 chr6 119611848 - MAGT1 chrX 77086392 - Exonic hg19 SARC TCGA-DX-AB2F-01A 5 13 Out-of-frame Inter-chr q22.31 q21.1 Seq+ 66271 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAN1A1-PDSS2 MAN1A1 chr6 119669628 - PDSS2 chr6 107475981 - Exonic hg19 BRCA TCGA-E9-A1RF-01A 13 10 In-Frame Intra-chr q22.31 q21 Tumor suppressor gene Seq+ 66272 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAN1A2-CD101 MAN1A2 chr1 118045592 - CD101 chr1 117576482 + Exonic hg19 OV TCGA-13-1512-01A 4 6 Out-of-frame Intra-chr p12 p13.1 Seq+ 66273 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAN1A2-CD101 MAN1A2 chr1 118009049 - CD101 chr1 117576482 + Exonic hg19 BRCA TCGA-OL-A5D7-01A 96 56 In-Frame Intra-chr p12 p13.1 Seq+ 66274 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAN1A2-PDE4DIP MAN1A2 chr1 117911107 - PDE4DIP chr1 145021167 - Exonic hg19 SKCM TCGA-EE-A2GR-06A 113 44 In-Frame Intra-chr p12 q21.2 Oncogene Seq+ 66275 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAN1A2-PTGFRN MAN1A2 chr1 117984947 - PTGFRN chr1 117529423 + Exonic hg19 UCEC TCGA-FI-A3PV-01A 9 5 Out-of-frame Intra-chr p12 p13.1 Seq+ 66276 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAN1A2-RNF216 MAN1A2 chr1 117911107 - RNF216 chr7 5817259 - Exonic hg19 LIHC TCGA-CC-5260-01A 3 1 Out-of-frame Inter-chr p12 p22.1 66277 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAN1A2-TTF2 MAN1A2 chr1 117957453 - TTF2 chr1 117629039 + Exonic hg19 UCEC TCGA-A5-A2K4-01A 7 4 Out-of-frame Intra-chr p12 p13.1 Seq+ 66278 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAN1A2-TTF2 MAN1A2 chr1 118003234 - TTF2 chr1 117641455 + Exonic hg19 UCEC TCGA-AJ-A3QS-01A 17 10 Out-of-frame Intra-chr p12 p13.1 Seq+ 66279 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAN1A2-TTF2 MAN1A2 chr1 117963271 - TTF2 chr1 117639973 + Exonic hg19 BRCA TCGA-B6-A0I1-01A 6 4 In-Frame Intra-chr p12 p13.1 Seq+ 66280 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAN1A2-VANGL1 MAN1A2 chr1 117984947 - VANGL1 chr1 116224985 + Exonic hg19 BRCA TCGA-A8-A0A6-01A 8 7 In-Frame Intra-chr p12 p13.1 Seq+ 66281 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAN1C1-C10orf93 MAN1C1 chr1 26075826 - C10orf93 chr10 134686328 - Exonic hg19 ESCA TCGA-L5-A8NS-01A 2 6 Out-of-frame Inter-chr p36.11 66282 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAN1C1-TMEM50A MAN1C1 chr1 26090458 - TMEM50A chr1 25687151 + Exonic hg19 BLCA TCGA-DK-AA6P-01A 22 19 Out-of-frame Intra-chr p36.11 p36.11 Seq+ 66283 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAN2A1-DIRC1 MAN2A1 chr5 109125228 - DIRC1 chr2 189599676 - Exonic hg19 PRAD TCGA-V1-A8MM-01A 3 1 CDS-5'UTR Inter-chr q21.3 q32.2 66284 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAN2A1-HSPA4 MAN2A1 chr5 109117299 - HSPA4 chr5 132435237 + Exonic hg19 BLCA TCGA-4Z-AA84-01A 4 2 Out-of-frame Intra-chr q21.3 q31.1 66285 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAN2A1-HTR4 MAN2A1 chr5 109125228 - HTR4 chr5 147830835 - Exonic hg19 SARC TCGA-DX-A6YU-01A 12 4 In-Frame Intra-chr q21.3 q32 Seq+ 66286 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAN2A1-TRIM9 MAN2A1 chr5 109026253 - TRIM9 chr14 51492078 - Exonic hg19 SARC TCGA-DX-A3M1-01A 5 1 In-Frame Inter-chr q21.3 q22.1 66287 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAN2B1-RTBDN MAN2B1 chr19 12760727 - RTBDN chr19 12937685 - Exonic hg19 BLCA TCGA-ZF-A9R9-01A 42 42 In-Frame Intra-chr p13.13 p13.13 Seq+ 66288 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAN2B2-TACC3 MAN2B2 chr4 6580225 - TACC3 chr4 1737458 + Exonic hg19 BLCA TCGA-DK-A3IS-01A 35 20 Out-of-frame Intra-chr p16.1 p16.3 Seq+ 66289 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAN2C1-MESP2 MAN2C1 chr15 75649134 - MESP2 chr15 90321296 + Exonic hg19 PRAD TCGA-CH-5761-01A 23 1 Out-of-frame Intra-chr q24.2 q26.1 Transcription factor Seq+ 66290 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAN2C1-PTPN9 MAN2C1 chr15 75658863 - PTPN9 chr15 75772255 - Exonic hg19 BLCA TCGA-4Z-AA7Q-01A 3 1 Out-of-frame Intra-chr q24.2 q24.2 66291 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MANBA-LIMCH1 MANBA chr4 103681875 - LIMCH1 chr4 41600937 + Exonic hg19 LUSC TCGA-22-5481-01A 18 7 In-Frame Intra-chr q24 p13 Seq+ 66292 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MANBAL-UBR5 MANBAL chr20 35929816 - UBR5 chr8 103341627 - Exonic hg19 BLCA TCGA-LC-A66R-01A 6 1 In-Frame Inter-chr q11.23 q22.3 Oncogene Seq+ 66293 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MANF-SETD2 MANF chr3 51423766 - SETD2 chr3 47108608 - Exonic hg19 BRCA TCGA-A2-A3KC-01A 32 29 In-Frame Intra-chr p21.2 p21.31 Oncogene Tumor suppressor gene Seq+ 66294 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP1B-C3orf67 MAP1B chr5 71411626 - C3orf67 chr3 58739590 - Exonic hg19 KIRC TCGA-BP-4961-01A 6 3 Out-of-frame Inter-chr q13.2 p14.2 Seq+ 66295 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP1B-SLC27A2 MAP1B chr5 71411626 - SLC27A2 chr15 50489697 + Exonic hg19 PRAD TCGA-G9-6348-01A 4 2 In-Frame Inter-chr q13.2 q21.2 Seq+ 66296 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP1B-SUPT16H MAP1B chr5 71505395 - SUPT16H chr14 21829491 - Exonic hg19 LUSC TCGA-77-8009-01A 2 6 Out-of-frame Inter-chr q13.2 q11.2 66297 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP1S-CEACAM6 MAP1S chr19 17835017 - CEACAM6 chr19 42270091 + Exonic hg19 ESCA TCGA-L5-A891-01A 340 1269 Out-of-frame Intra-chr p13.11 q13.2 Seq+ 66298 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP1S-CRTC1 MAP1S chr19 17844237 - CRTC1 chr19 18853720 + Exonic hg19 UCS TCGA-N8-A4PN-01A 6 5 In-Frame Intra-chr p13.11 p13.11 Oncogene Seq+ 66299 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP1S-ECH1 MAP1S chr19 17835998 - ECH1 chr19 39306647 - Exonic hg19 MESO TCGA-TS-A8AI-01A 442 375 Out-of-frame Intra-chr p13.11 Seq+ 66300 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP2-ICA1L MAP2 chr2 210289000 - ICA1L chr2 203680732 - Exonic hg19 HNSC TCGA-BA-A6DE-01A 33 16 5'UTR-CDS Intra-chr q34 q33.2 Seq+ 66301 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP2K1-CUX1 MAP2K1 chr15 66679765 - CUX1 chr7 101870647 + Exonic hg19 KIRC TCGA-BP-5192-01A 7 3 Out-of-frame Inter-chr q22.31 STE:STE7 Oncogene q22.1 Tumor suppressor gene Transcription factor Seq+ 66302 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP2K2-CAMKK1 MAP2K2 chr19 4110507 - CAMKK1 chr17 3789024 - Exonic hg19 BRCA TCGA-AQ-A0Y5-01A 7 4 CDS-5'UTR Inter-chr p13.3 STE:STE7 Oncogene p13.2 Seq+ 66303 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP2K2-PSMD9 MAP2K2 chr19 4110507 - PSMD9 chr12 122353762 + Exonic hg19 HNSC TCGA-BA-A4IG-01A 212 21 In-Frame Inter-chr p13.3 STE:STE7 Oncogene q24.31 Seq+ 66304 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP2K2-RP11-87C12.2 MAP2K2 chr19 4110507 - RP11-87C12.2 chr12 122353762 + Exonic hg19 HNSC TCGA-BA-A4IG-01A 191 36 Out-of-frame Inter-chr p13.3 STE:STE7 Oncogene 66305 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP2K3-NKAIN3 MAP2K3 chr17 21188281 - NKAIN3 chr8 63492098 + Exonic hg19 BRCA TCGA-E2-A14Y-01A 13 4 Out-of-frame Inter-chr p11.2 STE:STE7 q12.3 Seq+ 66306 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP2K4-CD79B MAP2K4 chr17 11958308 - CD79B chr17 62008745 - Exonic hg19 BRCA TCGA-GI-A2C8-01A 4 11 Out-of-frame Intra-chr p12 STE:STE7 Oncogene Tumor suppressor gene q23.3 Oncogene Seq+ 66307 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP2K4-DNAH9 MAP2K4 chr17 12032604 - DNAH9 chr17 11865184 + Exonic hg19 BRCA TCGA-E2-A109-01A 6 6 Out-of-frame Intra-chr p12 STE:STE7 Oncogene Tumor suppressor gene p12 Seq+ 66308 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP2K4-PSMD12 MAP2K4 chr17 11924318 - PSMD12 chr17 65353694 - Exonic hg19 HNSC TCGA-RS-A6TP-01A 13 12 Out-of-frame Intra-chr p12 STE:STE7 Oncogene Tumor suppressor gene q24.2 Seq+ 66309 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP2K5-ADAMTSL3 MAP2K5 chr15 68040939 - ADAMTSL3 chr15 84373141 + Exonic hg19 BRCA TCGA-EW-A1P0-01A 8 1 In-Frame Intra-chr q23 STE:STE7 q25.2 Seq+ 66310 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP2K5-C12orf28 MAP2K5 chr15 67893087 - C12orf28 chr12 70272808 + Exonic hg19 SARC TCGA-DX-A1L3-01A 37 28 Out-of-frame Inter-chr q23 STE:STE7 66311 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP2K5-C15orf61 MAP2K5 chr15 67893087 - C15orf61 chr15 67818756 + Exonic hg19 BLCA TCGA-K4-A83P-01A 12 5 Out-of-frame Intra-chr q23 STE:STE7 q23 Seq+ 66312 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP2K5-IQCH MAP2K5 chr15 67885312 - IQCH chr15 67782341 + Exonic hg19 CESC TCGA-C5-A7X3-01A 8 8 In-Frame Intra-chr q23 STE:STE7 q23 Seq+ 66313 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP2K5-IQCH MAP2K5 chr15 68020283 - IQCH chr15 67757465 + Exonic hg19 PRAD TCGA-EJ-A46G-01A 4 2 In-Frame Intra-chr q23 STE:STE7 q23 Seq+ 66314 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP2K5-RAB27A MAP2K5 chr15 67835808 - RAB27A chr15 55527154 - Exonic hg19 HNSC TCGA-CR-7386-01A 4 3 5'UTR-5'UTR Intra-chr q23 STE:STE7 q21.3 Seq+ 66315 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP2K5-SMAD6 MAP2K5 chr15 67995746 - SMAD6 chr15 67004006 + Exonic hg19 LUAD TCGA-91-7771-01A 2 1 Out-of-frame Intra-chr q23 STE:STE7 q22.31 66316 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP2K7-SH3GL1 MAP2K7 chr19 7968953 - SH3GL1 chr19 4361793 - Exonic hg19 BRCA TCGA-C8-A12L-01A 36 16 In-Frame Intra-chr p13.2 STE:STE7 p13.3 Seq+ 66317 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K1-OR4N2 MAP3K1 chr5 56155742 - OR4N2 chr14 20201528 + Exonic hg19 BLCA TCGA-UY-A78K-01A 4 4 Out-of-frame Inter-chr q11.2 STE:STE11 Oncogene q11.2 Seq+ 66318 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K1-PARN MAP3K1 chr5 56111882 - PARN chr16 14540938 - Exonic hg19 BRCA TCGA-E9-A22E-01A 6 20 In-Frame Inter-chr q11.2 STE:STE11 Oncogene Seq+ 66319 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K10-ALDH16A1 MAP3K10 chr19 40698620 - ALDH16A1 chr19 49971638 + Exonic hg19 PRAD TCGA-ZG-A9LM-01A 30 39 Out-of-frame Intra-chr q13.2 q13.33 Seq+ 66320 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K10-C19orf47 MAP3K10 chr19 40715126 - C19orf47 chr19 40847797 - Exonic hg19 LUSC TCGA-85-A510-01A 147 111 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 66321 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K10-PCMTD2 MAP3K10 chr19 40704462 - PCMTD2 chr20 62904574 + Exonic hg19 BRCA TCGA-UL-AAZ6-01A 8 6 Out-of-frame Inter-chr q13.2 Seq+ 66322 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K10-SUPT5H MAP3K10 chr19 40712064 - SUPT5H chr19 39948315 + Exonic hg19 LGG TCGA-S9-A6U0-01A 16 12 In-Frame Intra-chr q13.2 q13.2 Seq+ 66323 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K12-GDF11 MAP3K12 chr12 53893211 - GDF11 chr12 56142370 + Exonic hg19 PRAD TCGA-HC-8264-01B 5 7 5'UTR-CDS Intra-chr q13.13 q13.2 66324 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K13-CD37 MAP3K13 chr3 185003431 - CD37 chr19 49840166 + Exonic hg19 GBM TCGA-06-5859-01A 5 27 Out-of-frame Inter-chr q27.2 q13.33 Seq+ 66325 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K13-FETUB MAP3K13 chr3 185003431 - FETUB chr3 186369007 + Exonic hg19 SARC TCGA-IF-A3RQ-01A 2 6 Out-of-frame Intra-chr q27.2 q27.3 Seq+ 66326 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K13-NSUN2 MAP3K13 chr3 185046750 - NSUN2 chr5 6625782 - Exonic hg19 COAD TCGA-F4-6459-01A 5 8 5'UTR-CDS Inter-chr q27.2 p15.31 Seq+ 66327 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K13-P2RX5 MAP3K13 chr3 185081156 - P2RX5 chr17 3577171 - Exonic hg19 UCEC TCGA-PG-A914-01A 2 2 5'UTR-CDS Inter-chr q27.2 p13.2 Seq+ 66328 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K13-UTS2D MAP3K13 chr3 185003431 - UTS2D chr3 191046498 - Exonic hg19 LGG TCGA-CS-4942-01A 9 10 5'UTR-5'UTR Intra-chr q27.2 66329 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K13-VPS8 MAP3K13 chr3 185081156 - VPS8 chr3 184769664 + Exonic hg19 LUAD TCGA-38-4630-01A 4 5 5'UTR-CDS Intra-chr q27.2 q27.2 Seq+ 66330 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K14-ACBD4 MAP3K14 chr17 43362179 - ACBD4 chr17 43219950 + Exonic hg19 CESC TCGA-C5-A2LX-01A 2 1 In-Frame Intra-chr q21.31 q21.31 66331 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K14-NDEL1 MAP3K14 chr17 43366602 - NDEL1 chr17 8370248 + Exonic hg19 CESC TCGA-R2-A69V-01A 3 2 In-Frame Intra-chr q21.31 p13.1 66332 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K14-SRP68 MAP3K14 chr17 43362179 - SRP68 chr17 74063411 - Exonic hg19 SARC TCGA-X6-A7W8-01A 2 5 In-Frame Intra-chr q21.31 q25.1 Seq+ 66333 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K2-IWS1 MAP3K2 chr2 128093446 - IWS1 chr2 128238751 - Exonic hg19 BRCA TCGA-AC-A2BM-01A 21 12 In-Frame Intra-chr q14.3 STE:STE11 q14.3 Seq+ 66334 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K2-SHANK2 MAP3K2 chr2 128145028 - SHANK2 chr11 70830078 - Exonic hg19 BRCA TCGA-AC-A2BM-01A 2 3 5'UTR-CDS Inter-chr q14.3 STE:STE11 q13.4 Seq+ 66335 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K3-BRIP1 MAP3K3 chr17 61744420 - BRIP1 chr17 59763526 - Exonic hg19 KIRP TCGA-2Z-A9JI-01A 7 15 In-Frame Intra-chr q23.3 STE:STE11 q23.2 Oncogene Seq+ 66336 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K3-DBF4B MAP3K3 chr17 61730016 - DBF4B chr17 42824451 + Exonic hg19 ESCA TCGA-V5-A7RE-01A 6 27 Out-of-frame Intra-chr q23.3 STE:STE11 q21.31 Seq+ 66337 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K3-FCHSD2 MAP3K3 chr17 61710162 - FCHSD2 chr11 72726930 - Exonic hg19 LUSC TCGA-O2-A52S-01A 12 4 In-Frame Inter-chr q23.3 STE:STE11 q13.4 Seq+ 66338 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K3-TANC2 MAP3K3 chr17 61744420 - TANC2 chr17 61465996 + Exonic hg19 LGG TCGA-FG-A87Q-01A 3 5 Out-of-frame Intra-chr q23.3 STE:STE11 q23.2 Seq+ 66339 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K4-C6orf186 MAP3K4 chr6 161471011 - C6orf186 chr6 110636684 - Exonic hg19 LGG TCGA-E1-5304-01A 25 15 Out-of-frame Intra-chr q26 STE:STE11 Tumor suppressor gene 66340 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K4-FNDC1 MAP3K4 chr6 161471011 - FNDC1 chr6 159618463 + Exonic hg19 BRCA TCGA-AR-A251-01A 40 36 Out-of-frame Intra-chr q26 STE:STE11 Tumor suppressor gene q25.3 Seq+ 66341 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K4-FRMD1 MAP3K4 chr6 161413115 - FRMD1 chr6 168479704 - Exonic hg19 LUSC TCGA-NK-A5CR-01A 2 2 Out-of-frame Intra-chr q26 STE:STE11 Tumor suppressor gene q27 Seq+ 66342 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K4-XAF1 MAP3K4 chr6 161502070 - XAF1 chr17 6673962 + Exonic hg19 SARC TCGA-DX-A3M1-01A 4 3 Out-of-frame Inter-chr q26 STE:STE11 Tumor suppressor gene p13.1 Tumor suppressor gene 66343 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K5-ARFIP1 MAP3K5 chr6 137112848 - ARFIP1 chr4 153793604 + Exonic hg19 HNSC TCGA-CN-4736-01A 13 9 In-Frame Inter-chr q23.3 STE:STE11 q31.3 Seq+ 66344 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K5-CLVS2 MAP3K5 chr6 136972122 - CLVS2 chr6 123369767 + Exonic hg19 PRAD TCGA-VP-A875-01A 7 5 In-Frame Intra-chr q23.3 STE:STE11 q22.31 Seq+ 66345 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K5-NDUFB9 MAP3K5 chr6 137112848 - NDUFB9 chr8 125579888 + Exonic hg19 PCPG TCGA-RW-A686-01A 2 3 CDS-3'UTR Inter-chr q23.3 STE:STE11 q24.13 Seq+ 66346 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K5-NKAIN2 MAP3K5 chr6 137041588 - NKAIN2 chr6 125112485 + Exonic hg19 LUSC TCGA-66-2759-01A 14 7 In-Frame Intra-chr q23.3 STE:STE11 q22.31 Seq+ 66347 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K5-OSTM1 MAP3K5 chr6 137112848 - OSTM1 chr6 108385503 - Exonic hg19 UVM TCGA-VD-A8KJ-01A 10 9 Out-of-frame Intra-chr q23.3 STE:STE11 q21 Seq+ 66348 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K5-PERP MAP3K5 chr6 137112848 - PERP chr6 138417631 - Exonic hg19 BLCA TCGA-DK-A3IK-01A 7 8 In-Frame Intra-chr q23.3 STE:STE11 q23.3 Seq+ 66349 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K5-PREP MAP3K5 chr6 136960681 - PREP chr6 105781380 - Exonic hg19 UVM TCGA-VD-A8KJ-01A 2 1 Out-of-frame Intra-chr q23.3 STE:STE11 q21 66350 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K6-KLK3 MAP3K6 chr1 27685908 - KLK3 chr19 51358191 + Exonic hg19 PRAD TCGA-YL-A8SQ-01B 2 1 CDS-5'UTR Inter-chr p36.11 STE:STE11 q13.33 66351 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K7-COL12A1 MAP3K7 chr6 91246056 - COL12A1 chr6 75912543 - Exonic hg19 LGG TCGA-DU-6404-02B 4 3 CDS-5'UTR Intra-chr q15 STE:STE11 Oncogene q14.1 66352 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K8-HEATR7B2 MAP3K8 chr10 30723307 - HEATR7B2 chr5 41019120 - Exonic hg19 LUAD TCGA-55-1596-01A 21 13 5'UTR-CDS Inter-chr p11.23 STE:STE11 Tumor suppressor gene Seq+ 66353 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP3K8-LYZL2 MAP3K8 chr10 30748430 - LYZL2 chr10 30900953 - Exonic hg19 SKCM TCGA-FS-A1Z4-06A 80 49 Out-of-frame Intra-chr p11.23 STE:STE11 Tumor suppressor gene p11.23 Seq+ 66354 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4-CHD1 MAP4 chr3 47892186 - CHD1 chr5 98219587 - Exonic hg19 KIRP TCGA-BQ-5877-01A 2 1 Out-of-frame Inter-chr p21.31 q21.1 Tumor suppressor gene 66355 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4-GTF2H5 MAP4 chr3 48130263 - GTF2H5 chr6 158591502 + Exonic hg19 LIHC TCGA-BC-A69H-01A 50 20 5'UTR-5'UTR Inter-chr p21.31 q25.3 Seq+ 66356 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4-LRRC43 MAP4 chr3 48130263 - LRRC43 chr12 122674677 + Exonic hg19 OV TCGA-13-0801-01A 2 5 5'UTR-CDS Inter-chr p21.31 q24.31 Seq+ 66357 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4-MON1A MAP4 chr3 48130263 - MON1A chr3 49950792 - Exonic hg19 PRAD TCGA-HC-8265-01A 2 2 5'UTR-CDS Intra-chr p21.31 p21.31 66358 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4-NME6 MAP4 chr3 48019355 - NME6 chr3 48338319 - Exonic hg19 TGCT TCGA-2G-AAH8-01A 13 5 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 66359 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4-NME6 MAP4 chr3 48130263 - NME6 chr3 48342124 - Exonic hg19 BLCA TCGA-4Z-AA7Q-01A 3 2 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 66360 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4-ODZ4 MAP4 chr3 47956307 - ODZ4 chr11 78781054 - Exonic hg19 TGCT TCGA-XE-AANJ-01A 24 24 CDS-5'UTR Inter-chr p21.31 66361 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4-PLXNB1 MAP4 chr3 48019355 - PLXNB1 chr3 48457168 - Exonic hg19 UCEC TCGA-B5-A0JN-01A 3 2 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 66362 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4-QRICH1 MAP4 chr3 47956307 - QRICH1 chr3 49068077 - Exonic hg19 LIHC TCGA-EP-A2KA-01A 41 28 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 66363 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4-RBM42 MAP4 chr3 47956307 - RBM42 chr19 36124000 + Exonic hg19 SARC TCGA-DX-A8BL-01A 100 97 In-Frame Inter-chr p21.31 q13.12 Seq+ 66364 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4-RHOA MAP4 chr3 48130263 - RHOA chr3 49413024 - Exonic hg19 BRCA TCGA-A8-A09D-01A 113 28 5'UTR-5'UTR Intra-chr p21.31 p21.31 Oncogene Tumor suppressor gene Seq+ 66365 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4-SHISA5 MAP4 chr3 47898921 - SHISA5 chr3 48538726 - Exonic hg19 STAD TCGA-BR-8590-01A 4 24 In-Frame Intra-chr p21.31 p21.31 Seq+ 66366 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4-SPINK8 MAP4 chr3 48130263 - SPINK8 chr3 48351436 - Exonic hg19 BLCA TCGA-4Z-AA7Q-01A 44 33 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 66367 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4-SPINK8 MAP4 chr3 48040128 - SPINK8 chr3 48351436 - Exonic hg19 LUAD TCGA-55-A48Y-01A 8 3 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 66368 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4-SPINK8 MAP4 chr3 48130263 - SPINK8 chr3 48351436 - Exonic hg19 LUAD TCGA-99-8028-01A 4 2 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 66369 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4-SPINK8 MAP4 chr3 47956307 - SPINK8 chr3 48351436 - Exonic hg19 UCEC TCGA-AJ-A3BD-01A 30 12 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 66370 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4-SPINK8 MAP4 chr3 48019355 - SPINK8 chr3 48351436 - Exonic hg19 UCEC TCGA-EO-A1Y7-01A 2 1 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 66371 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4-SPINK8 MAP4 chr3 48019355 - SPINK8 chr3 48351436 - Exonic hg19 UCS TCGA-NA-A4R1-01A 4 2 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 66372 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4-ULK2 MAP4 chr3 47956307 - ULK2 chr17 19681029 - Exonic hg19 HNSC TCGA-UF-A7JK-01A 9 5 Out-of-frame Inter-chr p21.31 p11.2 Other:ULK Seq+ 66373 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4K2-NETO2 MAP4K2 chr11 64566266 - NETO2 chr16 47143622 - Exonic hg19 BRCA TCGA-BH-A0C3-01A 4 1 Out-of-frame Inter-chr q13.1 q12.1 Seq+ 66374 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4K3-EML4 MAP4K3 chr2 39605207 - EML4 chr2 42507990 + Exonic hg19 HNSC TCGA-QK-A8ZB-01A 3 2 In-Frame Intra-chr p22.1 p21 Oncogene Seq+ 66375 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4K3-PTPLAD2 MAP4K3 chr2 39664033 - PTPLAD2 chr9 21029397 - Exonic hg19 LUAD TCGA-67-3770-01A 15 2 Out-of-frame Inter-chr p22.1 Tumor suppressor gene 66376 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4K3-SMC6 MAP4K3 chr2 39664033 - SMC6 chr2 17927218 - Exonic hg19 KIRP TCGA-G7-6792-01A 5 4 CDS-5'UTR Intra-chr p22.1 p24.2 Seq+ 66377 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4K3-TMEM178 MAP4K3 chr2 39513993 - TMEM178 chr2 39934189 + Exonic hg19 PRAD TCGA-KK-A8IL-01A 6 4 Out-of-frame Intra-chr p22.1 66378 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4K4-LYG2 MAP4K4 chr2 102460773 - LYG2 chr2 99861921 - Exonic hg19 BRCA TCGA-LL-A7T0-01A 3 2 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 66379 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4K4-MUCL1 MAP4K4 chr2 102315000 - MUCL1 chr12 55248900 + Exonic hg19 LUAD TCGA-53-7813-01A 4 3 Out-of-frame Inter-chr q11.2 q13.2 Seq+ 66380 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4K4-REV1 MAP4K4 chr2 102472600 - REV1 chr2 100055772 - Exonic hg19 UCEC TCGA-PG-A914-01A 17 16 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 66381 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4K4-SYF2 MAP4K4 chr2 102315000 - SYF2 chr1 25551591 - Exonic hg19 STAD TCGA-HU-A4H4-01A 5 63 Out-of-frame Inter-chr q11.2 p36.11 Seq+ 66382 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4K5-ADCK1 MAP4K5 chr14 50971518 - ADCK1 chr14 78353434 + Exonic hg19 BLCA TCGA-XF-AAMW-01A 2 1 Out-of-frame Intra-chr q22.1 q24.3 Atypical:ABC1 Seq+ 66383 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4K5-ATP5S MAP4K5 chr14 50941795 - ATP5S chr14 50788201 + Exonic hg19 LUSC TCGA-LA-A7SW-01A 16 1 Out-of-frame Intra-chr q22.1 q21.3 Seq+ 66384 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4K5-NIN MAP4K5 chr14 50971518 - NIN chr14 51205004 - Exonic hg19 BRCA TCGA-BH-A0HY-01A 5 3 Out-of-frame Intra-chr q22.1 q22.1 Oncogene Seq+ 66385 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP4K5-SAV1 MAP4K5 chr14 50998660 - SAV1 chr14 51111732 - Exonic hg19 BRCA TCGA-AC-A3W5-01A 8 6 Out-of-frame Intra-chr q22.1 q22.1 66386 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP7-AHI1 MAP7 chr6 136680958 - AHI1 chr6 135621696 - Exonic hg19 ACC TCGA-OR-A5K2-01A 2 1 Out-of-frame Intra-chr q23.3 q23.3 66387 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP7-ARG1 MAP7 chr6 136871480 - ARG1 chr6 131904200 + Exonic hg19 BRCA TCGA-B6-A0IQ-01A 5 2 Out-of-frame Intra-chr q23.3 q23.2 Tumor suppressor gene Seq+ 66388 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP7-CNKSR3 MAP7 chr6 136686873 - CNKSR3 chr6 154771392 - Exonic hg19 BRCA TCGA-B6-A0IQ-01A 2 3 In-Frame Intra-chr q23.3 q25.2 Seq+ 66389 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP7-ECHDC1 MAP7 chr6 136871480 - ECHDC1 chr6 127611422 - Exonic hg19 BRCA TCGA-A2-A04V-01A 31 28 Out-of-frame Intra-chr q23.3 q22.33 Seq+ 66390 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP7-MAP3K5 MAP7 chr6 136677830 - MAP3K5 chr6 136960776 - Exonic hg19 PRAD TCGA-HC-A632-01A 11 7 In-Frame Intra-chr q23.3 q23.3 STE:STE11 Seq+ 66391 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP7-MAP3K5 MAP7 chr6 136871480 - MAP3K5 chr6 136904878 - Exonic hg19 PCPG TCGA-RW-A688-01A 32 30 Out-of-frame Intra-chr q23.3 q23.3 STE:STE11 Seq+ 66392 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP7-NRG3 MAP7 chr6 136871480 - NRG3 chr10 84118495 + Exonic hg19 ESCA TCGA-L5-A4OO-01A 3 2 In-Frame Inter-chr q23.3 q23.1 66393 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP7-OPRM1 MAP7 chr6 136732758 - OPRM1 chr6 154410961 + Exonic hg19 COAD TCGA-F4-6854-01A 3 3 Out-of-frame Intra-chr q23.3 q25.2 Seq+ 66394 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP7-ZBTB20 MAP7 chr6 136787899 - ZBTB20 chr3 114619189 - Exonic hg19 KIRC TCGA-BP-4346-01A 9 7 CDS-5'UTR Inter-chr q23.3 q13.31 Transcription factor Seq+ 66395 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP7D1-EIF2C3 MAP7D1 chr1 36639079 - EIF2C3 chr1 36469942 + Exonic hg19 UCEC TCGA-A5-A7WK-01A 10 7 In-Frame Intra-chr p34.3 66396 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAP9-TAT MAP9 chr4 156281320 - TAT chr16 71610330 - Exonic hg19 LGG TCGA-HT-7857-01A 6 6 CDS-5'UTR Inter-chr q32.1 q22.2 Tumor suppressor gene Seq+ 66397 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK1-ARHGEF7 MAPK1 chr22 22221612 - ARHGEF7 chr13 111806252 + Exonic hg19 LUAD TCGA-69-7979-01A 6 7 Out-of-frame Inter-chr q11.22 Oncogene q34 Seq+ 66398 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK1-KCNJ4 MAPK1 chr22 22160139 - KCNJ4 chr22 38824176 - Exonic hg19 BRCA TCGA-GM-A3XL-01A 7 10 CDS-5'UTR Intra-chr q11.22 Oncogene q13.1 Seq+ 66399 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK1-NOTCH1 MAPK1 chr22 22153301 - NOTCH1 chr9 139414017 - Exonic hg19 HNSC TCGA-CN-A498-01A 6 1 Out-of-frame Inter-chr q11.22 Oncogene q34.3 Oncogene Tumor suppressor gene Seq+ 66400 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK1-PRODH MAPK1 chr22 22221612 - PRODH chr22 18918711 - Exonic hg19 UCEC TCGA-EY-A3QX-01A 32 30 Out-of-frame Intra-chr q11.22 Oncogene q11.21 Tumor suppressor gene Seq+ 66401 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK1-TOP3B MAPK1 chr22 22221612 - TOP3B chr22 22313604 - Exonic hg19 LUAD TCGA-62-A46O-01A 9 4 Out-of-frame Intra-chr q11.22 Oncogene q11.22 Seq+ 66402 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK10-ARHGAP24 MAPK10 chr4 87275683 - ARHGAP24 chr4 86893189 + Exonic hg19 LGG TCGA-DH-A669-01A 13 4 5'UTR-CDS Intra-chr q21.3 Tumor suppressor gene q21.23 Seq+ 66403 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK10-ARHGAP24 MAPK10 chr4 87275683 - ARHGAP24 chr4 86893189 + Exonic hg19 LGG TCGA-DH-A669-02A 2 4 5'UTR-CDS Intra-chr q21.3 Tumor suppressor gene q21.23 Seq+ 66404 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK10-FAM13A MAPK10 chr4 87115489 - FAM13A chr4 89859392 - Exonic hg19 PRAD TCGA-KK-A8ID-01A 8 4 Out-of-frame Intra-chr q21.3 Tumor suppressor gene q22.1 66405 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK10-FAM190A MAPK10 chr4 87374183 - FAM190A chr4 91229395 + Exonic hg19 HNSC TCGA-CN-6010-01A 14 6 5'UTR-5'UTR Intra-chr q21.3 Tumor suppressor gene 66406 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK10-PTPN13 MAPK10 chr4 87275683 - PTPN13 chr4 87679413 + Exonic hg19 UCS TCGA-NA-A4QV-01A 4 3 5'UTR-CDS Intra-chr q21.3 Tumor suppressor gene q21.3 Tumor suppressor gene Seq+ 66407 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK10-UGT8 MAPK10 chr4 87374183 - UGT8 chr4 115544035 + Exonic hg19 LUSC TCGA-18-3421-01A 6 4 5'UTR-5'UTR Intra-chr q21.3 Tumor suppressor gene q26 Seq+ 66408 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK12-SSTR3 MAPK12 chr22 50693626 - SSTR3 chr22 37603878 - Exonic hg19 KIRP TCGA-P4-A5EB-01A 7 4 CDS-5'UTR Intra-chr q13.33 q13.1 Seq+ 66409 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK14-ANK1 MAPK14 chr6 35996050 - ANK1 chr8 41615655 - Exonic hg19 HNSC TCGA-F7-A50I-01A 7 3 Out-of-frame Inter-chr p21.31 p11.21 66410 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK14-EFHA1 MAPK14 chr6 36043739 - EFHA1 chr13 22113827 - Exonic hg19 BRCA TCGA-AO-A129-01A 23 2 In-Frame Inter-chr p21.31 Seq+ 66411 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK14-EHMT1 MAPK14 chr6 36063843 - EHMT1 chr9 140605419 + Exonic hg19 SARC TCGA-3B-A9HL-01A 2 1 In-Frame Inter-chr p21.31 q34.3 66412 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK14-SIN3A MAPK14 chr6 35996050 - SIN3A chr15 75722749 - Exonic hg19 SKCM TCGA-EB-A44Q-06A 6 6 CDS-5'UTR Inter-chr p21.31 q24.2 Seq+ 66413 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK1IP1L-ARF6 MAPK1IP1L chr14 55518521 - ARF6 chr14 50359974 + Exonic hg19 BRCA TCGA-A2-A0EY-01A 4 2 5'UTR-5'UTR Intra-chr q22.3 q21.3 Seq+ 66414 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK6-SCAMP2 MAPK6 chr15 52311573 - SCAMP2 chr15 75146990 - Exonic hg19 LGG TCGA-HT-A614-01A 4 1 5'UTR-CDS Intra-chr q21.2 q24.1 Seq+ 66415 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK6-TMOD3 MAPK6 chr15 52311573 - TMOD3 chr15 52155008 + Exonic hg19 PRAD TCGA-EJ-A65J-01A 2 1 5'UTR-5'UTR Intra-chr q21.2 q21.2 66416 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK6-TMOD3 MAPK6 chr15 52311573 - TMOD3 chr15 52179786 + Exonic hg19 LGG TCGA-HT-7880-01A 5 3 5'UTR-CDS Intra-chr q21.2 q21.2 66417 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK6-USO1 MAPK6 chr15 52311573 - USO1 chr4 76731585 + Exonic hg19 BRCA TCGA-C8-A12P-01A 19 17 5'UTR-CDS Inter-chr q21.2 q21.1 Seq+ 66418 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK8-ARFIP1 MAPK8 chr10 49514864 - ARFIP1 chr4 153750777 + Exonic hg19 CESC TCGA-C5-A2LT-01A 19 10 5'UTR-5'UTR Inter-chr q11.22 Oncogene q31.3 Seq+ 66419 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK8-C10orf53 MAPK8 chr10 49613024 - C10orf53 chr10 50901820 + Exonic hg19 LUAD TCGA-05-4244-01A 2 1 Out-of-frame Intra-chr q11.22 Oncogene q11.23 66420 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK8-KIRREL2 MAPK8 chr10 49534008 - KIRREL2 chr19 36355550 + Exonic hg19 BRCA TCGA-A2-A0EV-01A 3 2 5'UTR-CDS Inter-chr q11.22 Oncogene q13.12 66421 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK8IP3-HN1L MAPK8IP3 chr16 1756658 - HN1L chr16 1747813 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 5 3 In-Frame Intra-chr p13.3 Seq+ 66422 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK8IP3-TELO2 MAPK8IP3 chr16 1813007 - TELO2 chr16 1551664 + Exonic hg19 PRAD TCGA-HC-8265-01A 12 8 In-Frame Intra-chr p13.3 p13.3 Seq+ 66423 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK9-DGKB MAPK9 chr5 179691781 - DGKB chr7 14661119 - Exonic hg19 PRAD TCGA-EJ-7789-01A 42 30 Out-of-frame Inter-chr q35.3 Tumor suppressor gene p21.2 Seq+ 66424 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK9-UBL7 MAPK9 chr5 179718848 - UBL7 chr15 74749012 - Exonic hg19 OV TCGA-25-1314-01A 13 17 5'UTR-CDS Inter-chr q35.3 Tumor suppressor gene q24.1 Seq+ 66425 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPK9-ZFP2 MAPK9 chr5 179706796 - ZFP2 chr5 178358238 + Exonic hg19 CESC TCGA-JX-A3Q8-01A 7 3 CDS-5'UTR Intra-chr q35.3 Tumor suppressor gene q35.3 Transcription factor 66426 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPKAP1-AP1G2 MAPKAP1 chr9 128200748 - AP1G2 chr14 24037279 - Exonic hg19 BLCA TCGA-FD-A3SN-01A 2 1 3'UTR-5'UTR Inter-chr q33.3 q11.2 66427 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPKAP1-DENND1A MAPKAP1 chr9 128469250 - DENND1A chr9 126554909 - Exonic hg19 HNSC TCGA-CV-A45T-01A 4 1 5'UTR-CDS Intra-chr q33.3 q33.3 66428 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPKAP1-PRRC2B MAPKAP1 chr9 128419930 - PRRC2B chr9 134305477 + Exonic hg19 BRCA TCGA-A8-A08X-01A 17 13 5'UTR-5'UTR Intra-chr q33.3 q34.13 Seq+ 66429 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPKAP1-UHRF1 MAPKAP1 chr9 128419930 - UHRF1 chr19 4929234 + Exonic hg19 LUAD TCGA-53-7624-01A 2 2 Out-of-frame Inter-chr q33.3 p13.3 66430 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPKAP1-VAV2 MAPKAP1 chr9 128419930 - VAV2 chr9 136726554 - Exonic hg19 BRCA TCGA-A8-A08X-01A 194 120 In-Frame Intra-chr q33.3 q34.2 Seq+ 66431 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPKAPK2-PLA2G2A MAPKAPK2 chr1 206858853 - PLA2G2A chr1 20305372 - Exonic hg19 UCEC TCGA-EO-A1Y7-01A 101 100 CDS-5'UTR Intra-chr q32.1 CAMK:MAPKAPK p36.13 Tumor suppressor gene Seq+ 66432 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPKAPK2-SRGAP2 MAPKAPK2 chr1 206858853 - SRGAP2 chr1 206589249 + Exonic hg19 HNSC TCGA-CV-5435-01A 71 19 In-Frame Intra-chr q32.1 CAMK:MAPKAPK q32.1 Tumor suppressor gene Seq+ 66433 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPKAPK3-HEMK1 MAPKAPK3 chr3 50655215 - HEMK1 chr3 50609141 + Exonic hg19 LUAD TCGA-05-4405-01A 3 1 In-Frame Intra-chr p21.2 CAMK:MAPKAPK p21.31 Seq+ 66434 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPKAPK3-HEMK1 MAPKAPK3 chr3 50655215 - HEMK1 chr3 50609141 + Exonic hg19 LIHC TCGA-2Y-A9H0-01A 8 5 In-Frame Intra-chr p21.2 CAMK:MAPKAPK p21.31 Seq+ 66435 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPKAPK3-S1PR5 MAPKAPK3 chr3 50655215 - S1PR5 chr19 10625705 - Exonic hg19 UCS TCGA-N6-A4VE-01A 20 7 CDS-5'UTR Inter-chr p21.2 CAMK:MAPKAPK p13.2 Seq+ 66436 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPKAPK5-ALDH2 MAPKAPK5 chr12 112280573 - ALDH2 chr12 112237710 + Exonic hg19 LUAD TCGA-86-8054-01A 2 6 In-Frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 Seq+ 66437 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPKAPK5-ALDH2 MAPKAPK5 chr12 112280573 - ALDH2 chr12 112241663 + Exonic hg19 ACC TCGA-OR-A5J7-01A 44 18 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 Seq+ 66438 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPKAPK5-CCDC38 MAPKAPK5 chr12 112280573 - CCDC38 chr12 96266238 - Exonic hg19 SARC TCGA-3B-A9HO-01A 83 77 In-Frame Intra-chr q24.12 CAMK:MAPKAPK q23.1 Seq+ 66439 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPKAPK5-GNPTAB MAPKAPK5 chr12 112304035 - GNPTAB chr12 102183835 - Exonic hg19 BRCA TCGA-BH-A18H-01A 9 2 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q23.2 Seq+ 66440 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPKAPK5-UNC119B MAPKAPK5 chr12 112326422 - UNC119B chr12 121157723 + Exonic hg19 SARC TCGA-PC-A5DN-01A 7 4 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.31 Seq+ 66441 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPKBP1-VPS39 MAPKBP1 chr15 42092112 - VPS39 chr15 42455926 - Exonic hg19 BLCA TCGA-XF-AAMX-01A 10 5 Out-of-frame Intra-chr q15.1 q15.1 Seq+ 66442 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPRE1-POFUT1 MAPRE1 chr20 31407834 - POFUT1 chr20 30803072 + Exonic hg19 UCEC TCGA-EY-A2ON-01A 2 2 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 66443 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPRE1-TM9SF4 MAPRE1 chr20 31427662 - TM9SF4 chr20 30720816 + Exonic hg19 PRAD TCGA-J9-A8CN-01A 24 24 In-Frame Intra-chr q11.21 q11.21 Seq+ 66444 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPRE1-UQCC MAPRE1 chr20 31413854 - UQCC chr20 33935075 - Exonic hg19 BLCA TCGA-YC-A89H-01A 6 15 Out-of-frame Intra-chr q11.21 Seq+ 66445 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPRE1-USP28 MAPRE1 chr20 31427662 - USP28 chr11 113705057 - Exonic hg19 PRAD TCGA-EJ-7785-01A 33 10 In-Frame Inter-chr q11.21 q23.2 Seq+ 66446 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAPT-MARCH10 MAPT chr17 44039836 - 2019_ 3_ 10_ chr17 60865960 - Exonic hg19 BRCA TCGA-A8-A0AD-01A 15 66 Out-of-frame Intra-chr q23.2 Seq+ 66447 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARCH1-PTPN13 2019_ 3_ 1_ chr4 164909653 - PTPN13 chr4 87556405 + Exonic hg19 LUSC TCGA-43-5668-01A 4 2 Out-of-frame Intra-chr q32.3 q21.3 Tumor suppressor gene Seq+ 66448 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARCH2-CERS4 2019_ 3_ 2_ chr19 8483691 - CERS4 chr19 8315960 + Exonic hg19 BRCA TCGA-BH-A1F0-01A 3 1 Out-of-frame Intra-chr p13.2 p13.2 66449 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARCH2-PLVAP 2019_ 3_ 2_ chr19 8486900 - PLVAP chr19 17477004 - Exonic hg19 BRCA TCGA-A8-A097-01A 7 3 Out-of-frame Intra-chr p13.2 p13.11 Seq+ 66450 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARCH3-HTR4 2019_ 3_ 3_ chr5 126250622 - HTR4 chr5 147929825 - Exonic hg19 SARC TCGA-DX-AB2P-01A 2 1 Out-of-frame Intra-chr q23.2 q32 66451 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARCH3-OPCML 2019_ 3_ 3_ chr5 126366042 - OPCML chr11 132812905 - Exonic hg19 SKCM TCGA-W3-AA1V-06B 5 22 Out-of-frame Inter-chr q23.2 q25 Tumor suppressor gene Seq+ 66452 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARCH3-SRFBP1 2019_ 3_ 3_ chr5 126366042 - SRFBP1 chr5 121309891 + Exonic hg19 LGG TCGA-HT-A614-01A 3 1 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 66453 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARCH6-BASP1 2019_ 3_ 6_ chr5 10354029 - BASP1 chr5 17275317 + Exonic hg19 LIHC TCGA-G3-A25S-01A 9 1 Out-of-frame Intra-chr p15.2 p15.1 Tumor suppressor gene 66454 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARCH6-GALNTL4 2019_ 3_ 6_ chr5 10411649 - GALNTL4 chr11 11400811 - Exonic hg19 SARC TCGA-DX-A1KU-01A 14 12 Out-of-frame Inter-chr p15.2 Seq+ 66455 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARCH6-MTRR 2019_ 3_ 6_ chr5 10394897 - MTRR chr5 7883268 + Exonic hg19 KIRP TCGA-P4-A5EB-01A 10 8 Out-of-frame Intra-chr p15.2 p15.31 Oncogene Seq+ 66456 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARCH6-NDUFA6 2019_ 3_ 6_ chr5 10354029 - NDUFA6 chr22 42483179 - Exonic hg19 SARC TCGA-3B-A9HO-01A 595 570 Out-of-frame Inter-chr p15.2 Seq+ 66457 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARCH8-DEFB119 2019_ 3_ 8_ chr10 46089683 - DEFB119 chr20 29966194 - Exonic hg19 LGG TCGA-DU-5871-01A 9 5 Out-of-frame Inter-chr q11.21 Seq+ 66458 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARCH8-MSMB 2019_ 3_ 8_ chr10 45984815 - MSMB chr10 51555731 + Exonic hg19 LUSC TCGA-77-6843-01A 2 3 Out-of-frame Intra-chr q11.22 Tumor suppressor gene Seq+ 66459 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARCH8-NCAM2 2019_ 3_ 8_ chr10 46089683 - NCAM2 chr21 22696703 + Exonic hg19 SARC TCGA-QC-AA9N-01A 43 25 Out-of-frame Inter-chr q21.1 Tumor suppressor gene Seq+ 66460 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARCH9-KCNC2 2019_ 3_ 9_ chr12 58150867 - KCNC2 chr12 75445097 - Exonic hg19 BLCA TCGA-BT-A20X-01A 5 2 Out-of-frame Intra-chr q14.1 q21.1 Seq+ 66461 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARCH9-SLCO1B1 2019_ 3_ 9_ chr12 58150867 - SLCO1B1 chr12 21325584 + Exonic hg19 LGG TCGA-TM-A84I-01A 100 83 Out-of-frame Intra-chr q14.1 p12.1 Seq+ 66462 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARCH9-YEATS4 2019_ 3_ 9_ chr12 58150867 - YEATS4 chr12 69756568 + Exonic hg19 SARC TCGA-DX-A3LT-01A 6 3 Out-of-frame Intra-chr q14.1 q15 Seq+ 66463 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARK1-RHOU MARK1 chr1 220831176 - RHOU chr1 228873420 + Exonic hg19 SKCM TCGA-EE-A29D-06A 16 16 Out-of-frame Intra-chr q41 CAMK:CAMKL Oncogene q42.13 Seq+ 66464 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARK2-BATF2 MARK2 chr11 63607032 - BATF2 chr11 64762021 - Exonic hg19 SKCM TCGA-GN-A26D-06A 38 21 In-Frame Intra-chr q13.1 CAMK:CAMKL q13.1 Tumor suppressor gene Transcription factor Seq+ 66465 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARK2-BPIFA2 MARK2 chr11 63607032 - BPIFA2 chr20 31765953 + Exonic hg19 HNSC TCGA-BA-7269-01A 22 34 Out-of-frame Inter-chr q13.1 CAMK:CAMKL q11.21 Seq+ 66466 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARK2-BUB1B MARK2 chr11 63607032 - BUB1B chr15 40468678 + Exonic hg19 LUSC TCGA-94-7557-01A 16 12 In-Frame Inter-chr q13.1 CAMK:CAMKL q15.1 Oncogene Seq+ 66467 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARK2-C11orf84 MARK2 chr11 63607032 - C11orf84 chr11 63585277 + Exonic hg19 UCEC TCGA-B5-A3FB-01A 7 2 Out-of-frame Intra-chr q13.1 CAMK:CAMKL q13.1 Seq+ 66468 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARK2-C11orf84 MARK2 chr11 63668150 - C11orf84 chr11 63594400 + Exonic hg19 HNSC TCGA-BA-A4II-01A 75 19 Out-of-frame Intra-chr q13.1 CAMK:CAMKL q13.1 Seq+ 66469 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARK2-C11orf84 MARK2 chr11 63607032 - C11orf84 chr11 63585277 + Exonic hg19 BLCA TCGA-ZF-AA51-01A 9 10 Out-of-frame Intra-chr q13.1 CAMK:CAMKL q13.1 Seq+ 66470 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARK2-DLAT MARK2 chr11 63607032 - DLAT chr11 111907997 + Exonic hg19 LUAD TCGA-67-3774-01A 23 15 Out-of-frame Intra-chr q13.1 CAMK:CAMKL q23.1 Seq+ 66471 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARK2-FAM168A MARK2 chr11 63607032 - FAM168A chr11 73179537 - Exonic hg19 BRCA TCGA-A7-A4SB-01A 35 15 5'UTR-5'UTR Intra-chr q13.1 CAMK:CAMKL q13.4 Seq+ 66472 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARK3-BAG5 MARK3 chr14 103894777 - BAG5 chr14 104027529 - Exonic hg19 BRCA TCGA-A8-A06U-01A 4 3 Out-of-frame Intra-chr q32.32 CAMK:CAMKL q32.33 Seq+ 66473 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARK3-BAG5 MARK3 chr14 103934523 - BAG5 chr14 104027529 - Exonic hg19 BLCA TCGA-XF-AAMW-01A 4 2 Out-of-frame Intra-chr q32.32 CAMK:CAMKL q32.33 Seq+ 66474 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARK3-EIF5 MARK3 chr14 103871604 - EIF5 chr14 103801990 + Exonic hg19 LUSC TCGA-85-A53L-01A 53 25 CDS-5'UTR Intra-chr q32.32 CAMK:CAMKL q32.32 Seq+ 66475 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARK3-ENTPD5 MARK3 chr14 103946827 - ENTPD5 chr14 74482633 - Exonic hg19 LUSC TCGA-18-3411-01A 2 2 CDS-5'UTR Intra-chr q32.32 CAMK:CAMKL q24.3 Seq+ 66476 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARK3-FBLN5 MARK3 chr14 103871604 - FBLN5 chr14 92361416 - Exonic hg19 LUSC TCGA-43-5668-01A 16 4 Out-of-frame Intra-chr q32.32 CAMK:CAMKL q32.12 Seq+ 66477 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARK3-RP11-407N17.3 MARK3 chr14 103852417 - RP11-407N17.3 chr14 39716115 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 4 1 Out-of-frame Intra-chr q32.32 CAMK:CAMKL 66478 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARK3-SLC25A21 MARK3 chr14 103941547 - SLC25A21 chr14 37344209 - Exonic hg19 BRCA TCGA-GM-A2DD-01A 2 4 Out-of-frame Intra-chr q32.32 CAMK:CAMKL q13.3 Seq+ 66479 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARK4-LYPD5 MARK4 chr19 45797710 - LYPD5 chr19 44303986 - Exonic hg19 BRCA TCGA-A1-A0SQ-01A 15 9 Out-of-frame Intra-chr q13.32 CAMK:CAMKL Oncogene q13.31 Seq+ 66480 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARS-MSRB3 MARS chr12 57898082 - MSRB3 chr12 65881784 + Exonic hg19 SARC TCGA-DX-A1L0-01A 16 6 Out-of-frame Intra-chr q13.3 q14.3 Seq+ 66481 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARS-NOP2 MARS chr12 57898082 - NOP2 chr12 6673112 - Exonic hg19 BLCA TCGA-DK-A3IM-01A 9 4 In-Frame Intra-chr q13.3 p13.31 Seq+ 66482 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARVELD2-PIK3R1 MARVELD2 chr5 68720463 - PIK3R1 chr5 67589537 + Exonic hg19 UCEC TCGA-AP-A5FX-01A 6 11 In-Frame Intra-chr q13.2 q13.1 Oncogene Seq+ 66483 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MARVELD2-WDR19 MARVELD2 chr5 68716358 - WDR19 chr4 39287107 + Exonic hg19 LUAD TCGA-62-A46V-01A 27 27 CDS-3'UTR Inter-chr q13.2 p14 Seq+ 66484 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MASP2-EXOSC10 MASP2 chr1 11090233 - EXOSC10 chr1 11137708 - Exonic hg19 LIHC TCGA-FV-A495-01A 2 3 Out-of-frame Intra-chr p36.22 p36.22 Seq+ 66485 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAST2-C1orf228 MAST2 chr1 46348067 - C1orf228 chr1 45189794 + Exonic hg19 COAD TCGA-AD-6890-01A 5 2 Out-of-frame Intra-chr p34.1 AGC:MAST p34.1 66486 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAST2-C6orf52 MAST2 chr1 46425149 - C6orf52 chr6 10683465 - Exonic hg19 BRCA TCGA-A2-A4RW-01A 19 15 Out-of-frame Inter-chr p34.1 AGC:MAST p24.2 Seq+ 66487 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAST2-CLDN14 MAST2 chr1 46295253 - CLDN14 chr21 37834074 - Exonic hg19 OV TCGA-13-0801-01A 3 9 CDS-5'UTR Inter-chr p34.1 AGC:MAST q22.13 Seq+ 66488 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAST2-COQ6 MAST2 chr1 46474043 - COQ6 chr14 74425674 + Exonic hg19 PRAD TCGA-FC-A5OB-01A 2 5 In-Frame Inter-chr p34.1 AGC:MAST q24.3 Seq+ 66489 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAST2-MMACHC MAST2 chr1 46425149 - MMACHC chr1 45973028 + Exonic hg19 UCEC TCGA-AJ-A3BF-01A 4 1 Out-of-frame Intra-chr p34.1 AGC:MAST p34.1 Seq+ 66490 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAST2-MMEL1 MAST2 chr1 46493535 - MMEL1 chr1 2543643 - Exonic hg19 BRCA TCGA-E9-A1RB-01A 7 4 Out-of-frame Intra-chr p34.1 AGC:MAST Seq+ 66491 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAST2-NASP MAST2 chr1 46348067 - NASP chr1 46056895 + Exonic hg19 BRCA TCGA-A7-A5ZV-01A 9 4 In-Frame Intra-chr p34.1 AGC:MAST p34.1 Seq+ 66492 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAST2-NASP MAST2 chr1 46348067 - NASP chr1 46056895 + Exonic hg19 DLBC TCGA-FA-A6HN-01A 16 11 In-Frame Intra-chr p34.1 AGC:MAST p34.1 Seq+ 66493 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAST2-OMA1 MAST2 chr1 46425149 - OMA1 chr1 58946846 - Exonic hg19 PCPG TCGA-QR-A6H2-01A 8 6 Out-of-frame Intra-chr p34.1 AGC:MAST p32.1 Seq+ 66494 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAST2-PSMA5 MAST2 chr1 46348067 - PSMA5 chr1 109944712 - Exonic hg19 OV TCGA-23-1107-01A 2 15 Out-of-frame Intra-chr p34.1 AGC:MAST p13.3 Seq+ 66495 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAST2-ST3GAL3 MAST2 chr1 46348067 - ST3GAL3 chr1 44365213 + Exonic hg19 PRAD TCGA-ZG-A9KY-01A 22 15 In-Frame Intra-chr p34.1 AGC:MAST p34.1 Seq+ 66496 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAST2-TM4SF1 MAST2 chr1 46295253 - TM4SF1 chr3 149093556 - Exonic hg19 LIHC TCGA-BC-A217-01A 3 3 In-Frame Inter-chr p34.1 AGC:MAST q25.1 Seq+ 66497 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAST4-MRPS27 MAST4 chr5 66396420 - MRPS27 chr5 71516975 - Exonic hg19 LUAD TCGA-49-4514-01A 5 3 Out-of-frame Intra-chr q12.3 AGC:MAST q13.2 66498 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAST4-NLN MAST4 chr5 66449408 - NLN chr5 65118609 + Exonic hg19 BRCA TCGA-A2-A25B-01A 22 29 In-Frame Intra-chr q12.3 AGC:MAST q12.3 Seq+ 66499 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAST4-PLIN2 MAST4 chr5 65892846 - PLIN2 chr9 19131269 - Exonic hg19 LIHC TCGA-CC-5263-01A 20 10 Out-of-frame Inter-chr q12.3 AGC:MAST p22.1 Seq+ 66500 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAST4-ST8SIA4 MAST4 chr5 66429474 - ST8SIA4 chr5 100192100 - Exonic hg19 BLCA TCGA-XF-AAMT-01A 4 6 Out-of-frame Intra-chr q12.3 AGC:MAST q21.1 Seq+ 66501 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MATN2-LAPTM4B MATN2 chr8 99019829 - LAPTM4B chr8 98863625 + Exonic hg19 LIHC TCGA-BD-A3ER-01A 27 10 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 66502 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MATN2-SFMBT1 MATN2 chr8 98900470 - SFMBT1 chr3 52950230 - Exonic hg19 BLCA TCGA-XF-AAMQ-01A 3 6 Out-of-frame Inter-chr q22.1 p21.1 Seq+ 66503 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MATR3-KDM3B MATR3 chr5 138614097 - KDM3B chr5 137726702 + Exonic hg19 PRAD TCGA-EJ-5515-01A 26 14 5'UTR-CDS Intra-chr q31.2 q31.2 Tumor suppressor gene 66504 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MATR3-PCDHA2 MATR3 chr5 138629494 - PCDHA2 chr5 140358534 + Exonic hg19 BRCA TCGA-D8-A27W-01A 9 16 5'UTR-CDS Intra-chr q31.2 q31.3 66505 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAU2-MAP1S MAU2 chr19 19446996 - MAP1S chr19 17845082 + Exonic hg19 UCS TCGA-N5-A4RO-01A 167 81 In-Frame Intra-chr p13.11 p13.11 Seq+ 66506 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAX-ACTN1 MAX chr14 65560426 - ACTN1 chr14 69392389 - Exonic hg19 SARC TCGA-DX-AB2V-01A 310 102 In-Frame Intra-chr q23.3 Oncogene Tumor suppressor gene Transcription factor q24.1 Seq+ 66507 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAX-RUNX2 MAX chr14 65560426 - RUNX2 chr6 45405684 + Exonic hg19 HNSC TCGA-CN-5367-01A 25 8 Out-of-frame Inter-chr q23.3 Oncogene Tumor suppressor gene Transcription factor p21.1 Tumor suppressor gene Transcription factor Seq+ 66508 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MAX-TEX10 MAX chr14 65560426 - TEX10 chr9 103111654 - Exonic hg19 LUAD TCGA-86-7953-01A 25 30 CDS-5'UTR Inter-chr q23.3 Oncogene Tumor suppressor gene Transcription factor q31.1 Seq+ 66509 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MB-TRDN MB chr22 36002817 - TRDN chr6 123758551 - Exonic hg19 PRAD TCGA-G9-6338-01A 2 50 Out-of-frame Inter-chr q12.3 q22.31 66510 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MB21D2-CEP19 MB21D2 chr3 192635419 - CEP19 chr3 196434783 - Exonic hg19 LGG TCGA-DU-A7TA-01A 2 2 In-Frame Intra-chr q29 q29 Seq+ 66511 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MB21D2-CTLA4 MB21D2 chr3 192635419 - CTLA4 chr2 204735309 + Exonic hg19 SARC TCGA-FX-A2QS-01A 14 7 In-Frame Inter-chr q29 q33.2 Seq+ 66512 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBD2-C18orf42 MBD2 chr18 51750388 - C18orf42 chr18 5145754 - Exonic hg19 COAD TCGA-G4-6314-01A 10 15 Out-of-frame Intra-chr q21.2 Transcription factor Seq+ 66513 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBD2-DOCK2 MBD2 chr18 51715244 - DOCK2 chr5 169502951 + Exonic hg19 BRCA TCGA-AR-A1AY-01A 120 82 In-Frame Inter-chr q21.2 Transcription factor q35.1 Seq+ 66514 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBD3-GAK MBD3 chr19 1592617 - GAK chr4 871597 - Exonic hg19 PRAD TCGA-YL-A9WL-01A 29 96 In-Frame Inter-chr p13.3 Transcription factor p16.3 Other:NAK Seq+ 66515 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBD5-ACVR2A MBD5 chr2 148779253 - ACVR2A chr2 148653870 + Exonic hg19 HNSC TCGA-CV-6938-01A 3 1 5'UTR-CDS Intra-chr q23.1 q22.3 Oncogene Seq+ 66516 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBD5-IRG1 MBD5 chr2 149099905 - IRG1 chr13 77526624 + Exonic hg19 KIRC TCGA-B0-4706-01A 6 8 5'UTR-5'UTR Inter-chr q23.1 Seq+ 66517 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBNL1-DCUN1D1 MBNL1 chr3 152018156 - DCUN1D1 chr3 182683541 - Exonic hg19 LUSC TCGA-60-2696-01A 24 9 In-Frame Intra-chr q25.1 q26.33 Oncogene Seq+ 66518 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBNL1-DZIP1L MBNL1 chr3 152018156 - DZIP1L chr3 137805865 - Exonic hg19 BRCA TCGA-A2-A0CL-01A 3 2 In-Frame Intra-chr q25.1 q22.3 66519 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBNL1-NAALADL2 MBNL1 chr3 152018156 - NAALADL2 chr3 174455431 + Exonic hg19 BRCA TCGA-C8-A12Y-01A 3 5 Out-of-frame Intra-chr q25.1 q26.31 Seq+ 66520 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBNL1-NMNAT3 MBNL1 chr3 151986881 - NMNAT3 chr3 139297897 - Exonic hg19 PRAD TCGA-EJ-7792-01A 55 35 5'UTR-5'UTR Intra-chr q25.1 q23 Seq+ 66521 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBNL1-SGSM3 MBNL1 chr3 152150709 - SGSM3 chr22 40796700 + Exonic hg19 LUAD TCGA-62-8395-01A 22 18 CDS-5'UTR Inter-chr q25.1 q13.1 Seq+ 66522 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBNL2-GLI3 MBNL2 chr13 98018807 - GLI3 chr7 42188067 - Exonic hg19 LUSC TCGA-77-A5GH-01A 4 4 Out-of-frame Inter-chr q32.1 Transcription factor p14.1 Transcription factor Seq+ 66523 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBNL2-HS6ST3 MBNL2 chr13 97928663 - HS6ST3 chr13 97484744 + Exonic hg19 STAD TCGA-BR-8373-01A 4 40 Out-of-frame Intra-chr q32.1 Transcription factor q32.1 Seq+ 66524 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBNL2-MADD MBNL2 chr13 97928663 - MADD chr11 47330142 + Exonic hg19 SARC TCGA-DX-A6YS-01A 8 5 In-Frame Inter-chr q32.1 Transcription factor p11.2 Tumor suppressor gene Seq+ 66525 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBNL2-PLAC8 MBNL2 chr13 97874785 - PLAC8 chr4 84026173 - Exonic hg19 BLCA TCGA-GU-A767-01A 14 10 5'UTR-CDS Inter-chr q32.1 Transcription factor q21.22 Seq+ 66526 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBOAT1-F13A1 MBOAT1 chr6 20113107 - F13A1 chr6 6225093 - Exonic hg19 SKCM TCGA-D3-A51G-06A 2 2 In-Frame Intra-chr p22.3 p25.1 Seq+ 66527 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBOAT1-FYN MBOAT1 chr6 20212367 - FYN chr6 111983150 - Exonic hg19 BRCA TCGA-OL-A6VO-01A 31 37 Out-of-frame Intra-chr p22.3 q21 TK:Src Seq+ 66528 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBOAT2-ARHGAP25 MBOAT2 chr2 9013238 - ARHGAP25 chr2 69002353 + Exonic hg19 BRCA TCGA-E2-A14R-01A 8 2 In-Frame Intra-chr p25.1 p13.3 Seq+ 66529 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBOAT2-BRAT1 MBOAT2 chr2 9143669 - BRAT1 chr7 2587112 - Exonic hg19 PRAD TCGA-EJ-A7NM-01A 3 2 Out-of-frame Inter-chr p25.1 p22.3 Seq+ 66530 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBP-CBLN2 MBP chr18 74817167 - CBLN2 chr18 70206007 - Exonic hg19 UCEC TCGA-AJ-A2QM-01A 36 4 In-Frame Intra-chr q23 q22.3 Seq+ 66531 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBTD1-EFCAB3 MBTD1 chr17 49336504 - EFCAB3 chr17 60451175 + Exonic hg19 BRCA TCGA-A8-A09I-01A 18 13 5'UTR-CDS Intra-chr q21.33 q23.2 Seq+ 66532 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBTD1-MYO7A MBTD1 chr17 49294695 - MYO7A chr11 76903096 + Exonic hg19 BRCA TCGA-A8-A079-01A 32 43 In-Frame Inter-chr q21.33 q13.5 Seq+ 66533 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBTD1-SRCIN1 MBTD1 chr17 49270143 - SRCIN1 chr17 36735044 - Exonic hg19 BLCA TCGA-HQ-A2OF-01A 12 10 In-Frame Intra-chr q21.33 q12 Seq+ 66534 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBTD1-SYBU MBTD1 chr17 49284249 - SYBU chr8 110631268 - Exonic hg19 PRAD TCGA-KK-A8IC-01A 13 11 In-Frame Inter-chr q21.33 q23.2 Seq+ 66535 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBTD1-THRA MBTD1 chr17 49336504 - THRA chr17 38240088 + Exonic hg19 ESCA TCGA-L5-A8NG-01A 3 43 5'UTR-CDS Intra-chr q21.33 q21.1 Tumor suppressor gene Transcription factor Seq+ 66536 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBTD1-UTP18 MBTD1 chr17 49336504 - UTP18 chr17 49343543 + Exonic hg19 BRCA TCGA-BH-A0B1-01A 39 35 5'UTR-CDS Intra-chr q21.33 q21.33 Seq+ 66537 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBTD1-UTP18 MBTD1 chr17 49336504 - UTP18 chr17 49362606 + Exonic hg19 LGG TCGA-F6-A8O4-01A 48 75 5'UTR-CDS Intra-chr q21.33 q21.33 Seq+ 66538 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBTPS1-CDH5 MBTPS1 chr16 84096910 - CDH5 chr16 66422227 + Exonic hg19 UCEC TCGA-AX-A3FX-01A 5 3 In-Frame Intra-chr q24.1 q21 Oncogene Tumor suppressor gene Seq+ 66539 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBTPS1-TAF1C MBTPS1 chr16 84120963 - TAF1C chr16 84213950 - Exonic hg19 ESCA TCGA-JY-A6FA-01A 21 153 In-Frame Intra-chr q24.1 q24.1 Seq+ 66540 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBTPS2-CNKSR2 MBTPS2 chrX 21869730 - CNKSR2 chrX 21579589 + Exonic hg19 BRCA TCGA-E2-A1LL-01A 2 1 Out-of-frame Intra-chr p22.12 p22.12 66541 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MBTPS2-EDEM2 MBTPS2 chrX 21896810 - EDEM2 chr20 33714178 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 10 12 In-Frame Inter-chr p22.12 q11.22 Seq+ 66542 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCART1-GLIPR2 MCART1 chr9 37903528 - GLIPR2 chr9 36162359 + Exonic hg19 BRCA TCGA-A8-A08I-01A 12 7 Out-of-frame Intra-chr p13.3 66543 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCART1-UBAP2 MCART1 chr9 37904065 - UBAP2 chr9 33998862 - Exonic hg19 SARC TCGA-DX-AB2Q-01A 2 2 Out-of-frame Intra-chr p13.3 66544 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCART6-IL1RAPL2 MCART6 chrX 103401559 - IL1RAPL2 chrX 104440157 + Exonic hg19 PRAD TCGA-EJ-7782-01A 6 1 Out-of-frame Intra-chr q22.3 66545 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCAT-GTSE1 MCAT chr22 43533087 - GTSE1 chr22 46708038 + Exonic hg19 SKCM TCGA-ER-A197-06A 65 53 In-Frame Intra-chr q13.2 q13.31 Seq+ 66546 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCC-DBN1 MCC chr5 112630026 - DBN1 chr5 176887704 - Exonic hg19 LIHC TCGA-BC-A10T-01A 28 25 In-Frame Intra-chr q22.2 Tumor suppressor gene q35.3 Seq+ 66547 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCC-PSMD6 MCC chr5 112630026 - PSMD6 chr3 63996631 - Exonic hg19 KIRC TCGA-BP-4968-01A 71 72 Out-of-frame Inter-chr q22.2 Tumor suppressor gene p14.1 Seq+ 66548 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCC-SLC9A9 MCC chr5 112630026 - SLC9A9 chr3 143551063 - Exonic hg19 KIRC TCGA-CJ-4886-01A 3 1 Out-of-frame Inter-chr q22.2 Tumor suppressor gene q24 Seq+ 66549 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCCC1-ADAMTSL3 MCCC1 chr3 182817140 - ADAMTSL3 chr15 84558861 + Exonic hg19 LUSC TCGA-46-3765-01A 13 11 Out-of-frame Inter-chr q27.1 q25.2 Seq+ 66550 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCCC1-FXR1 MCCC1 chr3 182788787 - FXR1 chr3 180679256 + Exonic hg19 LUSC TCGA-56-7223-01A 33 37 Out-of-frame Intra-chr q27.1 q26.33 Seq+ 66551 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCCC1-MED10 MCCC1 chr3 182788787 - MED10 chr5 6372714 - Exonic hg19 BRCA TCGA-E2-A1LI-01A 32 11 Out-of-frame Inter-chr q27.1 p15.31 Seq+ 66552 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCCC2-NNT MCCC2 chr5 70900295 - NNT chr5 43675613 + Exonic hg19 SKCM TCGA-D3-A51N-06A 23 25 In-Frame Intra-chr q13.2 p12 Seq+ 66553 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCEE-ANXA4 MCEE chr2 71356847 - ANXA4 chr2 70008652 + Exonic hg19 LUAD TCGA-55-8615-01A 16 10 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 66554 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCF2L-ATP11A MCF2L chr13 113556685 - ATP11A chr13 113478658 + Exonic hg19 SARC TCGA-KF-A41W-01A 2 2 5'UTR-CDS Intra-chr q34 q34 66555 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCF2L-GAS6 MCF2L chr13 113669160 - GAS6 chr13 114542823 - Exonic hg19 LIHC TCGA-DD-A1EJ-01A 5 6 In-Frame Intra-chr q34 q34 Oncogene Seq+ 66556 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCF2L-LAMA5 MCF2L chr13 113679072 - LAMA5 chr20 60922084 - Exonic hg19 STAD TCGA-CG-4443-01A 12 14 In-Frame Inter-chr q34 q13.33 66557 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCF2L-STK24 MCF2L chr13 113623028 - STK24 chr13 99171727 - Exonic hg19 BLCA TCGA-DK-A2I4-01A 2 1 5'UTR-CDS Intra-chr q34 q32.2 Seq+ 66558 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCF2L2-DMRT1 MCF2L2 chr3 182994660 - DMRT1 chr9 967985 + Exonic hg19 SKCM TCGA-EE-A29H-06A 3 2 Out-of-frame Inter-chr q27.1 p24.3 Transcription factor 66559 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCFD2-SRBD1 MCFD2 chr2 47134949 - SRBD1 chr2 45647033 - Exonic hg19 BRCA TCGA-AR-A24H-01A 16 14 In-Frame Intra-chr p21 p21 Seq+ 66560 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCFD2-TTC7A MCFD2 chr2 47142862 - TTC7A chr2 47177502 + Exonic hg19 LUSC TCGA-96-7545-01A 33 16 5'UTR-CDS Intra-chr p21 p21 Seq+ 66561 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCFD2-TTC7A MCFD2 chr2 47142862 - TTC7A chr2 47177502 + Exonic hg19 UCS TCGA-NA-A4R1-01A 4 5 5'UTR-CDS Intra-chr p21 p21 Seq+ 66562 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCL1-AR MCL1 chr1 150547032 - AR chrX 66914515 + Exonic hg19 PRAD TCGA-HC-8265-01A 2 1 Out-of-frame Inter-chr q21.2 Oncogene q12 Oncogene Tumor suppressor gene Transcription factor 66563 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCL1-CTSS MCL1 chr1 150551319 - CTSS chr1 150720355 - Exonic hg19 OV TCGA-24-1469-01A 13 7 In-Frame Intra-chr q21.2 Oncogene q21.3 Seq+ 66564 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCM3-GPR110 MCM3 chr6 52146843 - GPR110 chr6 46991953 - Exonic hg19 BLCA TCGA-4Z-AA7R-01A 3 3 Out-of-frame Intra-chr p12.2 66565 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCM5-HMOX1 MCM5 chr22 35804556 - HMOX1 chr22 35785857 + Exonic hg19 BRCA TCGA-AN-A0AT-01A 26 14 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 66566 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCM5-HMOX1 MCM5 chr22 35796598 - HMOX1 chr22 35789461 + Exonic hg19 UCS TCGA-N6-A4V9-01A 94 30 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 66567 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCM5-LYN MCM5 chr22 35799535 - LYN chr8 56910905 + Exonic hg19 OV TCGA-25-1329-01A 9 12 In-Frame Inter-chr q12.3 q12.1 TK:Src Seq+ 66568 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCM5-RALGAPB MCM5 chr22 35799535 - RALGAPB chr20 37182510 + Exonic hg19 BRCA TCGA-BH-A0C0-01A 8 4 In-Frame Inter-chr q12.3 q11.23 Seq+ 66569 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCM5-TOM1 MCM5 chr22 35817453 - TOM1 chr22 35713870 + Exonic hg19 BRCA TCGA-D8-A1XQ-01A 33 11 In-Frame Intra-chr q12.3 q12.3 Seq+ 66570 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCM6-DARS MCM6 chr2 136622583 - DARS chr2 136664977 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 85 62 In-Frame Intra-chr q21.3 q21.3 Seq+ 66571 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCMBP-ZNF23 MCMBP chr10 121602766 - ZNF23 chr16 71487253 - Exonic hg19 BRCA TCGA-D8-A1X9-01A 8 4 In-Frame Inter-chr q26.11 q22.2 Transcription factor Seq+ 66572 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCOLN2-CDK1 MCOLN2 chr1 85462479 - CDK1 chr10 62539899 + Exonic hg19 LUAD TCGA-55-6971-01A 10 2 CDS-5'UTR Inter-chr p22.3 q21.2 Seq+ 66573 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCPH1-CSMD1 MCPH1 chr8 6312773 - CSMD1 chr8 3351248 - Exonic hg19 BRCA TCGA-AO-A0JE-01A 4 3 In-Frame Intra-chr p23.1 Tumor suppressor gene p23.2 Tumor suppressor gene Seq+ 66574 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCRS1-SRRM4 MCRS1 chr12 49956784 - SRRM4 chr12 119594300 + Exonic hg19 SARC TCGA-DX-A3LS-01A 34 10 Out-of-frame Intra-chr q13.12 q24.23 Seq+ 66575 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCTP1-CBLB MCTP1 chr5 94204038 - CBLB chr3 105495386 - Exonic hg19 KIRC TCGA-B0-4849-01A 4 6 Out-of-frame Inter-chr q15 q13.11 Seq+ 66576 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCTP2-PARP6 MCTP2 chr15 94901841 - PARP6 chr15 72563628 - Exonic hg19 CESC TCGA-C5-A7X3-01A 3 3 CDS-5'UTR Intra-chr q26.2 q23 Seq+ 66577 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MCU-NFIX MCU chr10 74452059 - NFIX chr19 13135835 + Exonic hg19 BRCA TCGA-E9-A1RH-01A 4 6 In-Frame Inter-chr q22.1 p13.13 Transcription factor Seq+ 66578 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MDGA1-PTK7 MDGA1 chr6 37623476 - PTK7 chr6 43126555 + Exonic hg19 GBM TCGA-06-0129-01A 5 17 In-Frame Intra-chr p21.2 p21.1 Seq+ 66579 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MDH1-COMMD1 MDH1 chr2 63821720 - COMMD1 chr2 62227836 + Exonic hg19 BRCA TCGA-A2-A04U-01A 66 60 In-Frame Intra-chr p15 p15 Seq+ 66580 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MDK-ERBB3 MDK chr11 46405349 - ERBB3 chr12 56492035 + Exonic hg19 LUSC TCGA-43-5668-01A 2 2 Out-of-frame Inter-chr p11.2 q13.2 Oncogene 66581 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MDK-PARP1 MDK chr11 46405349 - PARP1 chr1 224102800 - Exonic hg19 UCEC TCGA-B5-A3FD-01A 2 90 Out-of-frame Inter-chr p11.2 q42.12 Oncogene Tumor suppressor gene 66582 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MDK-SEC63 MDK chr11 46405349 - SEC63 chr6 108214782 - Exonic hg19 UCS TCGA-N6-A4VD-01A 2 7 Out-of-frame Inter-chr p11.2 q21 66583 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MDM1-ABCC1 MDM1 chr12 68707223 - ABCC1 chr16 16108348 + Exonic hg19 BRCA TCGA-BH-A0B1-01A 4 7 In-Frame Inter-chr q15 Seq+ 66584 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MDM1-INSR MDM1 chr12 68696400 - INSR chr19 7152938 - Exonic hg19 SARC TCGA-3B-A9HS-01A 15 11 In-Frame Inter-chr q15 p13.2 TK:InsR Seq+ 66585 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MDM1-NAV3 MDM1 chr12 68720437 - NAV3 chr12 78594253 + Exonic hg19 SARC TCGA-DX-A2J0-01A 12 10 Out-of-frame Intra-chr q15 q21.2 66586 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MDM1-PDZRN4 MDM1 chr12 68688348 - PDZRN4 chr12 41966166 + Exonic hg19 SARC TCGA-DX-A3U5-01A 4 3 3'UTR-CDS Intra-chr q15 q12 66587 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MDM1-RBMS2 MDM1 chr12 68726008 - RBMS2 chr12 56974968 + Exonic hg19 SARC TCGA-DX-A1KU-01A 7 3 Out-of-frame Intra-chr q15 q13.3 Seq+ 66588 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MDM2-AC079354.1 MDM2 chr12 69222711 - AC079354.1 chr2 203019396 + Exonic hg19 SARC TCGA-FX-A2QS-01A 42 44 Out-of-frame Inter-chr q15 Oncogene q33.1 66589 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MDM2-C12orf28 MDM2 chr12 69218431 - C12orf28 chr12 70249060 + Exonic hg19 SARC TCGA-FX-A3NK-01A 22 23 Out-of-frame Intra-chr q15 Oncogene 66590 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MDM2-DIP2B MDM2 chr12 69207408 - DIP2B chr12 51053977 + Exonic hg19 SARC TCGA-DX-AB2G-01A 4 4 Out-of-frame Intra-chr q15 Oncogene q13.12 Seq+ 66591 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MDM2-EGFR MDM2 chr12 69203072 - EGFR chr7 55231426 + Exonic hg19 GBM TCGA-19-2624-01A 27 43 Out-of-frame Inter-chr q15 Oncogene p11.2 TK:EGFR Oncogene Seq+ 66592 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MDM2-FGF18 MDM2 chr12 69214154 - FGF18 chr5 170883543 + Exonic hg19 SARC TCGA-DX-AB3A-01A 80 116 Out-of-frame Inter-chr q15 Oncogene q35.1 Seq+ 66593 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MDM2-NUP107 MDM2 chr12 69229764 - NUP107 chr12 69113121 + Exonic hg19 BRCA TCGA-3C-AAAU-01A 72 28 In-Frame Intra-chr q15 Oncogene q15 Seq+ 66594 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MDM2-NUP107 MDM2 chr12 69229764 - NUP107 chr12 69135593 + Exonic hg19 LUAD TCGA-55-8085-01A 8 7 In-Frame Intra-chr q15 Oncogene q15 Seq+ 66595 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MDM2-NUP107 MDM2 chr12 69202271 - NUP107 chr12 69082742 + Exonic hg19 LUSC TCGA-NC-A5HE-01A 59 38 In-Frame Intra-chr q15 Oncogene q15 Seq+ 66596 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MDM2-PTPRR MDM2 chr12 69207408 - PTPRR chr12 71078563 - Exonic hg19 SARC TCGA-WK-A8XO-01A 5 4 Out-of-frame Intra-chr q15 Oncogene q15 Seq+ 66597 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MDM2-SLAMF9 MDM2 chr12 69230529 - SLAMF9 chr1 159923443 - Exonic hg19 SARC TCGA-DX-A240-01A 10 17 Out-of-frame Inter-chr q15 Oncogene q23.2 Seq+ 66598 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MDN1-BEND3 MDN1 chr6 90380638 - BEND3 chr6 107392154 - Exonic hg19 COAD TCGA-AA-3685-01A 4 3 In-Frame Intra-chr q15 q21 66599 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MDN1-CYB5R4 MDN1 chr6 90482292 - CYB5R4 chr6 84603241 + Exonic hg19 LGG TCGA-E1-5304-01A 8 2 In-Frame Intra-chr q15 q14.2 66600 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ME1-SNAP91 ME1 chr6 84117487 - SNAP91 chr6 84350921 - Exonic hg19 LUSC TCGA-18-3419-01A 12 1 Out-of-frame Intra-chr q14.2 q14.2 Seq+ 66601 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ME1-SNAP91 ME1 chr6 84140596 - SNAP91 chr6 84350921 - Exonic hg19 STAD TCGA-BR-8373-01A 2 8 Out-of-frame Intra-chr q14.2 q14.2 Seq+ 66602 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MECOM-AC022431.2 MECOM chr3 169381124 - AC022431.2 chr5 55831055 - Exonic hg19 UCEC TCGA-AX-A3G6-01A 2 3 Out-of-frame Inter-chr q26.2 Transcription factor q11.2 66603 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MECOM-ANKRD10 MECOM chr3 168849217 - ANKRD10 chr13 111536140 - Exonic hg19 STAD TCGA-BR-4191-01A 2 6 In-Frame Inter-chr q26.2 Transcription factor q34 66604 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MECOM-ARMC8 MECOM chr3 169098975 - ARMC8 chr3 138007890 + Exonic hg19 LUSC TCGA-43-A474-01A 4 5 In-Frame Intra-chr q26.2 Transcription factor q22.3 Seq+ 66605 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MECOM-CD86 MECOM chr3 169381124 - CD86 chr3 121810448 + Exonic hg19 SARC TCGA-DX-A3UA-01A 4 3 Out-of-frame Intra-chr q26.2 Transcription factor q13.33 66606 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MECOM-FRMD5 MECOM chr3 168810746 - FRMD5 chr15 44180464 - Exonic hg19 LUAD TCGA-91-7771-01A 5 4 Out-of-frame Inter-chr q26.2 Transcription factor q15.3 Seq+ 66607 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MECOM-LMAN2L MECOM chr3 169381124 - LMAN2L chr2 97400263 - Exonic hg19 OV TCGA-10-0934-01A 6 3 Out-of-frame Inter-chr q26.2 Transcription factor q11.2 Seq+ 66608 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MECOM-LRRC34 MECOM chr3 169381124 - LRRC34 chr3 169526533 - Exonic hg19 UCEC TCGA-EO-A1Y7-01A 5 5 In-Frame Intra-chr q26.2 Transcription factor q26.2 Seq+ 66609 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MECOM-LRRC34 MECOM chr3 169098975 - LRRC34 chr3 169521969 - Exonic hg19 STAD TCGA-VQ-A8DT-01A 2 12 In-Frame Intra-chr q26.2 Transcription factor q26.2 Seq+ 66610 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MECOM-NCEH1 MECOM chr3 169381124 - NCEH1 chr3 172363482 - Exonic hg19 UCS TCGA-N9-A4Q8-01A 17 11 In-Frame Intra-chr q26.2 Transcription factor q26.31 Seq+ 66611 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MECOM-RPN1 MECOM chr3 169381124 - RPN1 chr3 128363826 - Exonic hg19 LAML TCGA-AB-2944-03A 13 27 Out-of-frame Intra-chr q26.2 Transcription factor q21.3 Seq+ 66612 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MECOM-SLC7A14 MECOM chr3 169381124 - SLC7A14 chr3 170219134 - Exonic hg19 UCEC TCGA-A5-A7WK-01A 37 35 In-Frame Intra-chr q26.2 Transcription factor q26.2 Seq+ 66613 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MECP2-F8 MECP2 chrX 153357642 - F8 chrX 154185446 - Exonic hg19 LIHC TCGA-K7-AAU7-01A 6 2 Out-of-frame Intra-chr q28 Transcription factor q28 Seq+ 66614 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MECR-NAALADL2 MECR chr1 29557243 - NAALADL2 chr3 175473008 + Exonic hg19 BRCA TCGA-AN-A049-01A 7 1 Out-of-frame Inter-chr p35.3 q26.31 Seq+ 66615 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED1-ABCC3 MED1 chr17 37604051 - ABCC3 chr17 48733193 + Exonic hg19 BRCA TCGA-BH-A0AW-01A 309 226 In-Frame Intra-chr q12 Tumor suppressor gene q21.33 Seq+ 66616 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED1-ARHGAP23 MED1 chr17 37604051 - ARHGAP23 chr17 36614346 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 8 4 In-Frame Intra-chr q12 Tumor suppressor gene q12 Seq+ 66617 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED1-CAP2 MED1 chr17 37595418 - CAP2 chr6 17539500 + Exonic hg19 BRCA TCGA-AC-A23C-01A 17 8 Out-of-frame Inter-chr q12 Tumor suppressor gene p22.3 Seq+ 66618 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED1-CDK12 MED1 chr17 37607291 - CDK12 chr17 37627132 + Exonic hg19 LUAD TCGA-95-7947-01A 167 215 Out-of-frame Intra-chr q12 Tumor suppressor gene q12 Oncogene Seq+ 66619 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED1-EYS MED1 chr17 37607291 - EYS chr6 66349785 - Exonic hg19 BRCA TCGA-A8-A0AD-01A 4 9 CDS-5'UTR Inter-chr q12 Tumor suppressor gene q12 Seq+ 66620 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED1-GDPD1 MED1 chr17 37579580 - GDPD1 chr17 57335112 + Exonic hg19 BRCA TCGA-A8-A09I-01A 50 29 In-Frame Intra-chr q12 Tumor suppressor gene q22 Seq+ 66621 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED1-GRB7 MED1 chr17 37607291 - GRB7 chr17 37898505 + Exonic hg19 STAD TCGA-BR-8486-01A 2 5 In-Frame Intra-chr q12 Tumor suppressor gene q12 Seq+ 66622 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED1-GSDMB MED1 chr17 37575970 - GSDMB chr17 38062524 - Exonic hg19 UCEC TCGA-5B-A90C-01A 103 80 In-Frame Intra-chr q12 Tumor suppressor gene q21.1 Seq+ 66623 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED1-IFLTD1 MED1 chr17 37599803 - IFLTD1 chr12 25679889 - Exonic hg19 BRCA TCGA-OL-A5RZ-01A 16 5 Out-of-frame Inter-chr q12 Tumor suppressor gene Tumor suppressor gene 66624 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED1-KRT222 MED1 chr17 37604051 - KRT222 chr17 38818296 - Exonic hg19 SKCM TCGA-ER-A2NF-01A 46 24 In-Frame Intra-chr q12 Tumor suppressor gene q21.2 Seq+ 66625 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED1-KRT222 MED1 chr17 37604051 - KRT222 chr17 38818296 - Exonic hg19 SKCM TCGA-ER-A2NF-06A 61 27 In-Frame Intra-chr q12 Tumor suppressor gene q21.2 Seq+ 66626 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED1-ODF3L2 MED1 chr17 37604051 - ODF3L2 chr19 464364 - Exonic hg19 BRCA TCGA-LL-A5YN-01A 60 34 Out-of-frame Inter-chr q12 Tumor suppressor gene p13.3 Seq+ 66627 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED1-PHOSPHO1 MED1 chr17 37579950 - PHOSPHO1 chr17 47304120 - Exonic hg19 BRCA TCGA-BH-A0AW-01A 2 2 CDS-5'UTR Intra-chr q12 Tumor suppressor gene q21.32 66628 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED1-RHBDL3 MED1 chr17 37604051 - RHBDL3 chr17 30615811 + Exonic hg19 BRCA TCGA-E2-A14Y-01A 5 7 In-Frame Intra-chr q12 Tumor suppressor gene q11.2 Seq+ 66629 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED1-SLC39A11 MED1 chr17 37566834 - SLC39A11 chr17 71084914 - Exonic hg19 LUSC TCGA-58-8393-01A 2 1 CDS-5'UTR Intra-chr q12 Tumor suppressor gene q25.1 66630 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED1-STARD3 MED1 chr17 37580880 - STARD3 chr17 37809734 + Exonic hg19 ESCA TCGA-L5-A88V-01A 74 503 CDS-5'UTR Intra-chr q12 Tumor suppressor gene q12 Seq+ 66631 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED1-TMPRSS9 MED1 chr17 37607291 - TMPRSS9 chr19 2398793 + Exonic hg19 BRCA TCGA-A2-A0EY-01A 33 32 Out-of-frame Inter-chr q12 Tumor suppressor gene p13.3 Seq+ 66632 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED10-MCCC1 MED10 chr5 6374437 - MCCC1 chr3 182812393 - Exonic hg19 BRCA TCGA-E2-A1LI-01A 2 1 Out-of-frame Inter-chr p15.31 q27.1 66633 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED12L-GOLIM4 MED12L chr3 150911453 - GOLIM4 chr3 167742883 - Exonic hg19 LUSC TCGA-63-A5M9-01A 9 5 In-Frame Intra-chr q25.1 q26.2 Seq+ 66634 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED13-ABCA9 MED13 chr17 60038949 - ABCA9 chr17 67025368 - Exonic hg19 BRCA TCGA-BH-A1FM-01A 5 3 Out-of-frame Intra-chr q23.2 q24.2 Seq+ 66635 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED13-AC110285.1 MED13 chr17 60142501 - AC110285.1 chr17 79430637 + Exonic hg19 CESC TCGA-VS-A8EJ-01A 161 118 Out-of-frame Intra-chr q23.2 q25.3 66636 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED13-C20orf118 MED13 chr17 60129898 - C20orf118 chr20 35515858 + Exonic hg19 LUAD TCGA-83-5908-01A 57 33 Out-of-frame Inter-chr q23.2 Seq+ 66637 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED13-DDX42 MED13 chr17 60129898 - DDX42 chr17 61886180 + Exonic hg19 LUAD TCGA-78-7146-01A 72 41 Out-of-frame Intra-chr q23.2 q23.3 Seq+ 66638 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED13-ITGA3 MED13 chr17 60059559 - ITGA3 chr17 48141441 + Exonic hg19 BRCA TCGA-B6-A0IN-01A 9 1 Out-of-frame Intra-chr q23.2 q21.33 66639 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED13-KCNJ2 MED13 chr17 60142501 - KCNJ2 chr17 68170965 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 44 39 CDS-5'UTR Intra-chr q23.2 q24.3 Seq+ 66640 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED13-MYO15B MED13 chr17 60140428 - MYO15B chr17 73606247 + Exonic hg19 ESCA TCGA-V5-A7RE-01A 19 48 CDS-5'UTR Intra-chr q23.2 q25.1 Seq+ 66641 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED13-TANC2 MED13 chr17 60042367 - TANC2 chr17 61151304 + Exonic hg19 BRCA TCGA-AR-A252-01A 3 5 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 66642 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED13-TEX2 MED13 chr17 60064368 - TEX2 chr17 62291602 - Exonic hg19 BRCA TCGA-C8-A12P-01A 26 5 CDS-5'UTR Intra-chr q23.2 q23.3 Seq+ 66643 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED13-VMP1 MED13 chr17 60028186 - VMP1 chr17 57915656 + Exonic hg19 BRCA TCGA-AO-A03L-01A 5 7 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 66644 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED13L-CDK17 MED13L chr12 116418555 - CDK17 chr12 96728643 - Exonic hg19 SARC TCGA-DX-A23V-01A 5 1 CDS-5'UTR Intra-chr q24.21 q23.1 66645 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED13L-COL23A1 MED13L chr12 116714865 - COL23A1 chr5 177690325 - Exonic hg19 LUAD TCGA-93-A4JQ-01A 30 14 In-Frame Inter-chr q24.21 q35.3 Seq+ 66646 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED13L-DGKH MED13L chr12 116440808 - DGKH chr13 42783095 + Exonic hg19 BRCA TCGA-E2-A15A-01A 7 1 Out-of-frame Inter-chr q24.21 q14.11 Seq+ 66647 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED13L-DGKH MED13L chr12 116440808 - DGKH chr13 42783095 + Exonic hg19 BRCA TCGA-E2-A15A-06A 4 2 Out-of-frame Inter-chr q24.21 q14.11 Seq+ 66648 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED13L-GTF2IRD1 MED13L chr12 116549233 - GTF2IRD1 chr7 73922405 + Exonic hg19 BRCA TCGA-OL-A5RW-01A 13 4 CDS-5'UTR Inter-chr q24.21 q11.23 Transcription factor Seq+ 66649 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED13L-HRK MED13L chr12 116714865 - HRK chr12 117299271 - Exonic hg19 LIHC TCGA-BC-A8YO-01A 10 21 CDS-3'UTR Intra-chr q24.21 q24.22 Seq+ 66650 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED13L-IQCD MED13L chr12 116675273 - IQCD chr12 113638618 - Exonic hg19 CESC TCGA-IR-A3LB-01A 9 9 Out-of-frame Intra-chr q24.21 q24.13 Seq+ 66651 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED13L-METTL9 MED13L chr12 116675273 - METTL9 chr16 21629186 + Exonic hg19 SKCM TCGA-EB-A1NK-01A 39 16 Out-of-frame Inter-chr q24.21 Seq+ 66652 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED13L-MYBPC1 MED13L chr12 116444111 - MYBPC1 chr12 102061510 + Exonic hg19 LGG TCGA-E1-5303-01A 30 9 In-Frame Intra-chr q24.21 q23.2 Seq+ 66653 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED13L-PTPRR MED13L chr12 116534474 - PTPRR chr12 71158558 - Exonic hg19 COAD TCGA-CM-6675-01A 28 10 Out-of-frame Intra-chr q24.21 q15 Seq+ 66654 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED13L-RP11-366K18.3 MED13L chr12 116675273 - RP11-366K18.3 chr8 67108960 + Exonic hg19 SKCM TCGA-D3-A3BZ-06A 220 201 Out-of-frame Inter-chr q24.21 66655 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED13L-TAOK3 MED13L chr12 116549233 - TAOK3 chr12 118651915 - Exonic hg19 BLCA TCGA-4Z-AA82-01A 30 30 Out-of-frame Intra-chr q24.21 q24.23 Seq+ 66656 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED13L-TAOK3 MED13L chr12 116675273 - TAOK3 chr12 118588963 - Exonic hg19 PRAD TCGA-YJ-A8SW-01A 108 101 Out-of-frame Intra-chr q24.21 q24.23 Seq+ 66657 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED13L-TRAFD1 MED13L chr12 116675273 - TRAFD1 chr12 112572542 + Exonic hg19 BRCA TCGA-EW-A1P3-01A 6 2 Out-of-frame Intra-chr q24.21 q24.13 Transcription factor Seq+ 66658 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED13L-WSCD2 MED13L chr12 116675273 - WSCD2 chr12 108618516 + Exonic hg19 BLCA TCGA-ZF-A9RM-01A 32 10 In-Frame Intra-chr q24.21 q23.3 Seq+ 66659 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED14-SRPX MED14 chrX 40547706 - SRPX chrX 38009147 - Exonic hg19 COAD TCGA-F4-6459-01A 62 28 In-Frame Intra-chr p11.4 p11.4 Tumor suppressor gene Seq+ 66660 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED15-AHRR MED15 chr22 20909435 - AHRR chr5 376725 + Exonic hg19 SKCM TCGA-D3-A1Q3-06A 50 18 In-Frame Inter-chr q11.21 p15.33 Tumor suppressor gene Transcription factor Seq+ 66661 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED15-BCL2L13 MED15 chr22 20922918 - BCL2L13 chr22 18120868 + Exonic hg19 SKCM TCGA-EE-A17Z-06A 10 3 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 66662 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED15-C14orf118 MED15 chr22 20862033 - C14orf118 chr14 76638186 + Exonic hg19 PRAD TCGA-KK-A7B1-01A 3 2 Out-of-frame Inter-chr q11.21 66663 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED15-C22orf25 MED15 chr22 20922918 - C22orf25 chr22 20024283 + Exonic hg19 BLCA TCGA-PQ-A6FN-01A 6 5 CDS-5'UTR Intra-chr q11.21 66664 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED15-COMT MED15 chr22 20891491 - COMT chr22 19948722 + Exonic hg19 GBM TCGA-32-2638-01A 5 11 CDS-5'UTR Intra-chr q11.21 q11.21 Seq+ 66665 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED15-FKBP10 MED15 chr22 20891491 - FKBP10 chr17 39977906 + Exonic hg19 STAD TCGA-VQ-A91S-01A 50 883 Out-of-frame Inter-chr q11.21 q21.2 Seq+ 66666 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED15-GNB1L MED15 chr22 20862033 - GNB1L chr22 19808898 - Exonic hg19 BLCA TCGA-DK-A3IK-01A 24 16 CDS-5'UTR Intra-chr q11.21 q11.21 Seq+ 66667 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED15-KLHL22 MED15 chr22 20862033 - KLHL22 chr22 20843531 - Exonic hg19 HNSC TCGA-BB-8601-01A 38 24 CDS-5'UTR Intra-chr q11.21 q11.21 Seq+ 66668 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED15-PI4KA MED15 chr22 20855123 - PI4KA chr22 21104282 - Exonic hg19 LUSC TCGA-66-2793-01A 295 132 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 66669 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED15-TFE3 MED15 chr22 20929519 - TFE3 chrX 48891766 - Exonic hg19 KIRC TCGA-6D-AA2E-01A 50 16 In-Frame Inter-chr q11.21 p11.23 Oncogene Transcription factor Seq+ 66670 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED16-C19orf22 MED16 chr19 871926 - C19orf22 chr19 897540 - Exonic hg19 ACC TCGA-OR-A5K5-01A 49 46 Out-of-frame Intra-chr p13.3 66671 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED16-PALM MED16 chr19 893086 - PALM chr19 746285 + Exonic hg19 LGG TCGA-FG-A710-01A 12 5 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 66672 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED16-POLR2E MED16 chr19 879937 - POLR2E chr19 1089550 - Exonic hg19 OV TCGA-13-A5FT-01A 64 194 In-Frame Intra-chr p13.3 p13.3 Seq+ 66673 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED20-CCND3 MED20 chr6 41884523 - CCND3 chr6 41908323 - Exonic hg19 UCS TCGA-NA-A4QV-01A 13 5 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 66674 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED20-RNF182 MED20 chr6 41877007 - RNF182 chr6 13974441 + Exonic hg19 BRCA TCGA-BH-A18U-01A 7 4 CDS-5'UTR Intra-chr p21.1 p23 Seq+ 66675 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED20-TLL2 MED20 chr6 41884523 - TLL2 chr10 98240216 - Exonic hg19 LUSC TCGA-60-2698-01A 20 6 In-Frame Inter-chr p21.1 q24.1 Seq+ 66676 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED20-TRERF1 MED20 chr6 41884523 - TRERF1 chr6 42330817 - Exonic hg19 UCS TCGA-N6-A4VG-01A 10 2 CDS-5'UTR Intra-chr p21.1 p21.1 Transcription factor 66677 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED21-PIP5K1C MED21 chr12 27175554 - PIP5K1C chr19 3661999 - Exonic hg19 SARC TCGA-DX-A1KZ-01A 5 13 In-Frame Inter-chr p11.23 p13.3 Seq+ 66678 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED23-ANO2 MED23 chr6 131908849 - ANO2 chr12 5841796 - Exonic hg19 CESC TCGA-Q1-A5R2-01A 8 2 In-Frame Inter-chr q23.2 p13.31 Seq+ 66679 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED23-BEND3 MED23 chr6 131946005 - BEND3 chr6 107420500 - Exonic hg19 BRCA TCGA-A2-A04W-01A 2 2 CDS-5'UTR Intra-chr q23.2 q21 Seq+ 66680 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED23-KLHL32 MED23 chr6 131939547 - KLHL32 chr6 97489368 + Exonic hg19 BRCA TCGA-AR-A0TW-01A 50 20 In-Frame Intra-chr q23.2 q16.1 Seq+ 66681 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED23-RNF217 MED23 chr6 131908849 - RNF217 chr6 125366357 + Exonic hg19 LUSC TCGA-NC-A5HH-01A 6 9 In-Frame Intra-chr q23.2 q22.31 Seq+ 66682 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED24-CEP112 MED24 chr17 38209551 - CEP112 chr17 63957716 - Exonic hg19 BRCA TCGA-A8-A076-01A 5 6 Out-of-frame Intra-chr q21.1 q24.1 Seq+ 66683 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED24-CEP95 MED24 chr17 38209551 - CEP95 chr17 62517520 + Exonic hg19 BRCA TCGA-B6-A0IG-01A 39 16 Out-of-frame Intra-chr q21.1 q23.3 Seq+ 66684 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED24-KRT40 MED24 chr17 38209551 - KRT40 chr17 39135276 - Exonic hg19 OV TCGA-29-2428-01A 8 19 In-Frame Intra-chr q21.1 Seq+ 66685 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED24-KRT40 MED24 chr17 38209551 - KRT40 chr17 39134548 - Exonic hg19 BLCA TCGA-GV-A40E-01A 25 3 Out-of-frame Intra-chr q21.1 Seq+ 66686 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED24-NR1D1 MED24 chr17 38178208 - NR1D1 chr17 38253656 - Exonic hg19 ESCA TCGA-L5-A8NG-01A 4 31 In-Frame Intra-chr q21.1 q21.1 Transcription factor Seq+ 66687 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED24-SSH2 MED24 chr17 38209551 - SSH2 chr17 28030080 - Exonic hg19 BRCA TCGA-B6-A0WV-01A 8 3 Out-of-frame Intra-chr q21.1 q11.2 Seq+ 66688 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED25-AP2A1 MED25 chr19 50322553 - AP2A1 chr19 50285014 + Exonic hg19 BRCA TCGA-EW-A3U0-01A 34 23 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 66689 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED25-CCDC155 MED25 chr19 50335672 - CCDC155 chr19 49910143 + Exonic hg19 UCEC TCGA-B5-A5OD-01A 81 46 In-Frame Intra-chr q13.33 q13.33 Seq+ 66690 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED25-MAPK15 MED25 chr19 50335672 - MAPK15 chr8 144799864 + Exonic hg19 BRCA TCGA-OL-A66I-01A 16 11 In-Frame Inter-chr q13.33 Seq+ 66691 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED25-SIGLEC12 MED25 chr19 50322553 - SIGLEC12 chr19 51995083 - Exonic hg19 LUAD TCGA-55-8620-01A 46 32 Out-of-frame Intra-chr q13.33 q13.41 Seq+ 66692 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED25-ST8SIA6 MED25 chr19 50322553 - ST8SIA6 chr10 17432619 - Exonic hg19 SKCM TCGA-ER-A3EV-06A 3 4 In-Frame Inter-chr q13.33 p12.33 Seq+ 66693 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED27-TG MED27 chr9 134889724 - TG chr8 134107288 + Exonic hg19 SKCM TCGA-EB-A24D-01A 4 7 Out-of-frame Inter-chr q34.13 q24.22 Seq+ 66694 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED29-ADAM18 MED29 chr19 39884277 - ADAM18 chr8 39550119 + Exonic hg19 LUSC TCGA-85-7843-01A 25 11 In-Frame Inter-chr q13.2 Seq+ 66695 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED29-MYO1D MED29 chr19 39884277 - MYO1D chr17 31076024 - Exonic hg19 BRCA TCGA-C8-A8HP-01A 14 8 In-Frame Inter-chr q13.2 q11.2 Seq+ 66696 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED29-SAMD4B MED29 chr19 39884277 - SAMD4B chr19 39873848 + Exonic hg19 BRCA TCGA-E2-A14R-01A 24 5 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 66697 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED4-HTR2A MED4 chr13 48653980 - HTR2A chr13 47409774 - Exonic hg19 GBM TCGA-12-0619-01A 3 2 In-Frame Intra-chr q14.2 q14.2 Seq+ 66698 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MED8-SCMH1 MED8 chr1 43850717 - SCMH1 chr1 41494398 - Exonic hg19 BRCA TCGA-UL-AAZ6-01A 5 3 Out-of-frame Intra-chr p34.2 p34.2 Transcription factor Seq+ 66699 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MEF2A-LRRC28 MEF2A chr15 100215663 - LRRC28 chr15 99892574 + Exonic hg19 UCEC TCGA-PG-A5BC-01A 45 30 In-Frame Intra-chr q26.3 Transcription factor q26.3 Seq+ 66700 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MEF2A-LRRC28 MEF2A chr15 100138716 - LRRC28 chr15 99926235 + Exonic hg19 SARC TCGA-X6-A7WC-01A 28 19 5'UTR-CDS Intra-chr q26.3 Transcription factor q26.3 Seq+ 66701 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MEF2A-NFATC2 MEF2A chr15 100173378 - NFATC2 chr20 50007988 - Exonic hg19 BRCA TCGA-C8-A1HN-01A 2 1 Out-of-frame Inter-chr q26.3 Transcription factor q13.2 Tumor suppressor gene Transcription factor 66702 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MEF2A-RP11-35N6.1 MEF2A chr15 100138716 - RP11-35N6.1 chr9 103947732 + Exonic hg19 ESCA TCGA-Q9-A6FW-01A 2 13 Out-of-frame Inter-chr q26.3 Transcription factor 66703 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MEF2A-SV2B MEF2A chr15 100230633 - SV2B chr15 91795049 + Exonic hg19 SARC TCGA-DX-A1KY-01A 16 6 Out-of-frame Intra-chr q26.3 Transcription factor q26.1 Seq+ 66704 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MEF2A-WDR61 MEF2A chr15 100106309 - WDR61 chr15 78588067 - Exonic hg19 SKCM TCGA-GN-A26A-06A 7 11 5'UTR-5'UTR Intra-chr q26.3 Transcription factor q25.1 Seq+ 66705 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MEF2D-APOA2 MEF2D chr1 156470278 - APOA2 chr1 161193215 - Exonic hg19 PRAD TCGA-EJ-5518-01A 474 268 5'UTR-5'UTR Intra-chr q22 Transcription factor q23.3 Seq+ 66706 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MEF2D-CD55 MEF2D chr1 156470278 - CD55 chr1 207532891 + Exonic hg19 SARC TCGA-DX-A7EI-01A 3 3 5'UTR-CDS Intra-chr q22 Transcription factor q32.2 Seq+ 66707 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MEF2D-SORL1 MEF2D chr1 156470278 - SORL1 chr11 121424646 + Exonic hg19 LGG TCGA-TM-A84J-01A 7 7 5'UTR-CDS Inter-chr q22 Transcription factor q24.1 Seq+ 66708 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MEF2D-ZDHHC5 MEF2D chr1 156438572 - ZDHHC5 chr11 57449894 + Exonic hg19 GBM TCGA-27-2524-01A 3 7 In-Frame Inter-chr q22 Transcription factor q12.1 Seq+ 66709 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MEGF6-WRAP73 MEGF6 chr1 3511902 - WRAP73 chr1 3564124 - Exonic hg19 LUAD TCGA-44-2659-01A 7 2 Out-of-frame Intra-chr p36.32 p36.32 66710 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MEGF8-ITPKC MEGF8 chr19 42875634 - ITPKC chr19 41231245 + Exonic hg19 SARC TCGA-IE-A3OV-01A 5 3 In-Frame Intra-chr q13.2 q13.2 Seq+ 66711 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MEGF9-TTLL5 MEGF9 chr9 123476036 - TTLL5 chr14 76230958 + Exonic hg19 PCPG TCGA-QT-A5XN-01A 11 11 Out-of-frame Inter-chr q33.2 q24.3 Seq+ 66712 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MEI1-MKL1 MEI1 chr22 42159325 - MKL1 chr22 40859290 - Exonic hg19 SKCM TCGA-XV-A9W2-01A 4 2 CDS-5'UTR Intra-chr q13.2 q13.2 Seq+ 66713 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MEIS1-ARHGAP25 MEIS1 chr2 66739426 - ARHGAP25 chr2 69043421 + Exonic hg19 SKCM TCGA-FS-A1ZY-06A 3 2 In-Frame Intra-chr p14 Transcription factor p13.3 66714 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MEIS2-BBS2 MEIS2 chr15 37242525 - BBS2 chr16 56545196 - Exonic hg19 SARC TCGA-WP-A9GB-01A 12 8 Out-of-frame Inter-chr q14 Transcription factor q13 Seq+ 66715 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MEIS2-MYO5A MEIS2 chr15 37329015 - MYO5A chr15 52664560 - Exonic hg19 BRCA TCGA-C8-A1HI-01A 3 6 In-Frame Intra-chr q14 Transcription factor q21.2 Seq+ 66716 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MEIS2-ZNF143 MEIS2 chr15 37329015 - ZNF143 chr11 9516193 + Exonic hg19 GBM TCGA-06-0174-01A 9 26 In-Frame Inter-chr q14 Transcription factor p15.4 Transcription factor Seq+ 66717 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MELK-CNTFR MELK chr9 36573004 - CNTFR chr9 34581203 - Exonic hg19 BLCA TCGA-4Z-AA7M-01A 4 2 5'UTR-5'UTR Intra-chr p13.2 CAMK:CAMKL p13.3 Seq+ 66718 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MELK-MS4A12 MELK chr9 36607670 - MS4A12 chr11 60264786 + Exonic hg19 CESC TCGA-MU-A5YI-01A 33 34 5'UTR-5'UTR Inter-chr p13.2 CAMK:CAMKL q12.2 Seq+ 66719 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MEMO1-DPY30 MEMO1 chr2 32235256 - DPY30 chr2 32264561 - Exonic hg19 BRCA TCGA-BH-A18T-01A 2 11 CDS-5'UTR Intra-chr p22.3 p22.3 Seq+ 66720 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MEN1-CDC42BPG MEN1 chr11 64572506 - CDC42BPG chr11 64608120 - Exonic hg19 LIHC TCGA-BC-A8YO-01A 11 3 In-Frame Intra-chr q13.1 Oncogene Tumor suppressor gene q13.1 Seq+ 66721 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MEN1-PTPRJ MEN1 chr11 64577137 - PTPRJ chr11 48149332 + Exonic hg19 CESC TCGA-C5-A3HD-01B 51 17 In-Frame Intra-chr q13.1 Oncogene Tumor suppressor gene p11.2 Tumor suppressor gene Seq+ 66722 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MET-C8orf34 MET chr7 116412043 - C8orf34 chr8 69358564 + Exonic hg19 KIRP TCGA-GL-7773-01A 73 63 In-Frame Inter-chr q31.2 TK:Met Oncogene q13.2 Seq+ 66723 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MET-CAV1 MET chr7 116381079 - CAV1 chr7 116199000 + Exonic hg19 UCEC TCGA-B5-A0JN-01A 22 27 In-Frame Intra-chr q31.2 TK:Met Oncogene q31.2 Tumor suppressor gene Seq+ 66724 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MET-CAV1 MET chr7 116312631 - CAV1 chr7 116199000 + Exonic hg19 BRCA TCGA-B6-A0I6-01A 20 8 5'UTR-CDS Intra-chr q31.2 TK:Met Oncogene q31.2 Tumor suppressor gene Seq+ 66725 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MET-CAV1 MET chr7 116340338 - CAV1 chr7 116199000 + Exonic hg19 STAD TCGA-BR-7716-01A 4 161 In-Frame Intra-chr q31.2 TK:Met Oncogene q31.2 Tumor suppressor gene Seq+ 66726 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MET-DYNC1I1 MET chr7 116371913 - DYNC1I1 chr7 95434033 + Exonic hg19 BRCA TCGA-AR-A1AO-01A 4 8 CDS-5'UTR Intra-chr q31.2 TK:Met Oncogene q21.3 Seq+ 66727 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MET-TFG MET chr7 116412043 - TFG chr3 100455420 + Exonic hg19 THCA TCGA-FK-A3S3-01A 1204 646 In-Frame Inter-chr q31.2 TK:Met Oncogene q12.2 Seq+ 66728 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MET-WNT2 MET chr7 116417523 - WNT2 chr7 116937930 - Exonic hg19 LUAD TCGA-44-7662-01A 288 267 Out-of-frame Intra-chr q31.2 TK:Met Oncogene q31.2 Seq+ 66729 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq METAP1D-HAT1 METAP1D chr2 172864916 - HAT1 chr2 172841096 + Exonic hg19 LUSC TCGA-52-7809-01A 3 3 In-Frame Intra-chr q31.1 q31.1 Seq+ 66730 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq METAP2-VEZT METAP2 chr12 95868106 - VEZT chr12 95663827 + Exonic hg19 BRCA TCGA-A7-A13D-01B 2 1 Out-of-frame Intra-chr q22 q22 Tumor suppressor gene Seq+ 66731 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq METAP2-VEZT METAP2 chr12 95889874 - VEZT chr12 95689827 + Exonic hg19 LIHC TCGA-G3-AAUZ-01A 6 3 In-Frame Intra-chr q22 q22 Tumor suppressor gene Seq+ 66732 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq METRNL-AC087491.2 METRNL chr17 81043199 - AC087491.2 chr17 37778097 + Exonic hg19 BRCA TCGA-A2-A0T1-01A 80 78 Out-of-frame Intra-chr 66733 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq METTL10-CTBP2 METTL10 chr10 126453961 - CTBP2 chr10 126678267 - Exonic hg19 ESCA TCGA-VR-A8Q7-01A 5 22 Out-of-frame Intra-chr q26.13 Seq+ 66734 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq METTL12-DPF2 METTL12 chr11 62433418 - DPF2 chr11 65119154 + Exonic hg19 GBM TCGA-06-5415-01A 5 4 In-Frame Intra-chr q12.3 q13.1 Seq+ 66735 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq METTL13-EIF4G3 METTL13 chr1 171753639 - EIF4G3 chr1 21231464 - Exonic hg19 PRAD TCGA-CH-5771-01A 22 7 In-Frame Intra-chr q24.3 p36.12 Seq+ 66736 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq METTL16-CLEC10A METTL16 chr17 2339968 - CLEC10A chr17 6982204 - Exonic hg19 SARC TCGA-DX-A3M1-01A 4 1 CDS-5'UTR Intra-chr p13.3 p13.1 Seq+ 66737 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq METTL16-DHX8 METTL16 chr17 2376818 - DHX8 chr17 41566817 + Exonic hg19 HNSC TCGA-F7-8298-01A 3 11 In-Frame Intra-chr p13.3 q21.31 Seq+ 66738 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq METTL16-FXR2 METTL16 chr17 2405498 - FXR2 chr17 7509467 - Exonic hg19 SARC TCGA-IE-A6BZ-01A 12 4 Out-of-frame Intra-chr p13.3 p13.1 Seq+ 66739 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq METTL21A-PLEKHM3 METTL21A chr2 208486530 - PLEKHM3 chr2 208693220 - Exonic hg19 LUAD TCGA-55-6969-01A 2 2 Out-of-frame Intra-chr q33.3 q33.3 66740 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq METTL21B-GLI1 METTL21B chr12 58166911 - GLI1 chr12 57857448 + Exonic hg19 LGG TCGA-TM-A84B-01A 353 52 CDS-5'UTR Intra-chr q13.3 Tumor suppressor gene Transcription factor Seq+ 66741 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq METTL21B-LTA4H METTL21B chr12 58166911 - LTA4H chr12 96418325 - Exonic hg19 SARC TCGA-DX-A23V-01A 21 1 Out-of-frame Intra-chr q23.1 Seq+ 66742 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq METTL21B-PIP4K2C METTL21B chr12 58166911 - PIP4K2C chr12 57987808 + Exonic hg19 SKCM TCGA-EE-A2GB-06A 17 8 Out-of-frame Intra-chr q13.3 Seq+ 66743 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq METTL21B-PTPRR METTL21B chr12 58166911 - PTPRR chr12 71158558 - Exonic hg19 SARC TCGA-DX-A1KZ-01A 34 10 Out-of-frame Intra-chr q15 Seq+ 66744 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq METTL21B-RASSF3 METTL21B chr12 58166911 - RASSF3 chr12 65078567 + Exonic hg19 LUSC TCGA-43-2581-01A 186 45 Out-of-frame Intra-chr q14.2 Tumor suppressor gene Seq+ 66745 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq METTL3-SALL2 METTL3 chr14 21971316 - SALL2 chr14 21990378 - Exonic hg19 BLCA TCGA-G2-A3IE-01A 7 4 CDS-3'UTR Intra-chr q11.2 q11.2 Tumor suppressor gene Transcription factor 66746 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq METTL4-STXBP5L METTL4 chr18 2544194 - STXBP5L chr3 120941850 + Exonic hg19 LUSC TCGA-NC-A5HL-01A 4 1 Out-of-frame Inter-chr p11.32 q13.33 Seq+ 66747 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq METTL5-MERTK METTL5 chr2 170676071 - MERTK chr2 112785928 + Exonic hg19 SKCM TCGA-ER-A3EV-06A 3 4 Out-of-frame Intra-chr q31.1 q13 Seq+ 66748 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq METTL5-TLK1 METTL5 chr2 170680999 - TLK1 chr2 171914707 - Exonic hg19 STAD TCGA-CG-4449-01A 6 14 In-Frame Intra-chr q31.1 q31.1 Other:TLK Seq+ 66749 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq METTL8-RFTN2 METTL8 chr2 172271113 - RFTN2 chr2 198437004 - Exonic hg19 HNSC TCGA-DQ-7594-01A 4 5 5'UTR-CDS Intra-chr q31.1 q33.1 Seq+ 66750 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MEX3D-DCTN6 MEX3D chr19 1567463 - DCTN6 chr8 30032601 + Exonic hg19 BRCA TCGA-EW-A1P4-01A 81 79 In-Frame Inter-chr p13.3 p12 Seq+ 66751 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MEX3D-TCF3 MEX3D chr19 1567463 - TCF3 chr19 1646426 - Exonic hg19 ESCA TCGA-Q9-A6FU-01A 4 35 Out-of-frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Transcription factor Seq+ 66752 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MFF-COL4A3 MFF chr2 228193505 - COL4A3 chr2 228147081 + Exonic hg19 HNSC TCGA-CV-7433-01A 2 5 5'UTR-CDS Intra-chr q36.3 q36.3 Seq+ 66753 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MFHAS1-ZFAT MFHAS1 chr8 8747571 - ZFAT chr8 135545215 - Exonic hg19 STAD TCGA-HF-7132-01A 2 17 Out-of-frame Intra-chr p23.1 q24.22 Transcription factor Seq+ 66754 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MFI2-IGSF11 MFI2 chr3 196730772 - IGSF11 chr3 118624565 - Exonic hg19 BLCA TCGA-DK-A3X2-01A 3 1 In-Frame Intra-chr q13.32 66755 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MFN1-HEG1 MFN1 chr3 179069823 - HEG1 chr3 124748332 - Exonic hg19 LIHC TCGA-ED-A97K-01A 2 1 Out-of-frame Intra-chr q26.33 q21.2 66756 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MFN2-PLOD1 MFN2 chr1 12042647 - PLOD1 chr1 12034710 + Exonic hg19 OV TCGA-23-1118-01A 3 4 5'UTR-CDS Intra-chr p36.22 p36.22 Seq+ 66757 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MFSD1-CLDN11 MFSD1 chr3 158531856 - CLDN11 chr3 170577772 + Exonic hg19 SARC TCGA-DX-A8BH-01A 35 78 Out-of-frame Intra-chr q25.32 q26.2 Seq+ 66758 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MFSD1-GFM1 MFSD1 chr3 158545126 - GFM1 chr3 158399784 + Exonic hg19 BRCA TCGA-A8-A07U-01A 13 6 In-Frame Intra-chr q25.32 q25.32 Seq+ 66759 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MFSD1-SPTSSB MFSD1 chr3 158531856 - SPTSSB chr3 161077682 - Exonic hg19 SARC TCGA-DX-A8BH-01A 4 4 CDS-5'UTR Intra-chr q25.32 q26.1 Seq+ 66760 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MFSD2A-LAPTM5 MFSD2A chr1 40421057 - LAPTM5 chr1 31215396 - Exonic hg19 LGG TCGA-CS-6188-01A 191 59 In-Frame Intra-chr p34.2 Tumor suppressor gene p35.2 Seq+ 66761 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MFSD2A-SLC5A9 MFSD2A chr1 40424497 - SLC5A9 chr1 48703351 + Exonic hg19 LUSC TCGA-58-8392-01A 13 8 In-Frame Intra-chr p34.2 Tumor suppressor gene p33 Seq+ 66762 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MFSD6-C2orf88 MFSD6 chr2 191302287 - C2orf88 chr2 191064423 + Exonic hg19 OV TCGA-24-1545-01A 6 4 CDS-5'UTR Intra-chr q32.2 q32.2 Seq+ 66763 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MFSD6-CALCRL MFSD6 chr2 191302287 - CALCRL chr2 188228229 - Exonic hg19 GBM TCGA-06-2561-01A 2 4 In-Frame Intra-chr q32.2 q32.1 Seq+ 66764 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MFSD6-CXorf66 MFSD6 chr2 191302287 - CXorf66 chrX 139040376 - Exonic hg19 BRCA TCGA-A8-A06U-01A 7 9 Out-of-frame Inter-chr q32.2 q27.1 Seq+ 66765 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGA-ANKLE1 MGA chr15 41962156 - ANKLE1 chr19 17396240 + Exonic hg19 LUAD TCGA-67-3773-01A 3 1 In-Frame Inter-chr q15.1 Transcription factor p13.11 66766 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGA-CDKN2A MGA chr15 42005694 - CDKN2A chr9 21968241 - Exonic hg19 BLCA TCGA-GC-A3RD-01A 26 28 In-Frame Inter-chr q15.1 Transcription factor p21.3 Oncogene Tumor suppressor gene Seq+ 66767 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGA-NUSAP1 MGA chr15 41991357 - NUSAP1 chr15 41641296 + Exonic hg19 ACC TCGA-OR-A5JY-01A 5 6 Out-of-frame Intra-chr q15.1 Transcription factor q15.1 Seq+ 66768 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGA-PBX4 MGA chr15 41962156 - PBX4 chr19 19681642 - Exonic hg19 LUAD TCGA-67-3773-01A 3 3 Out-of-frame Inter-chr q15.1 Transcription factor p13.11 Transcription factor Seq+ 66769 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGA-PLA2G4D MGA chr15 42042813 - PLA2G4D chr15 42373331 - Exonic hg19 MESO TCGA-TS-A7OZ-01A 2 2 In-Frame Intra-chr q15.1 Transcription factor q15.1 Seq+ 66770 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGA-SCD MGA chr15 41962156 - SCD chr10 102107821 + Exonic hg19 PRAD TCGA-J4-A83I-01A 8 3 Out-of-frame Inter-chr q15.1 Transcription factor q24.31 Seq+ 66771 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGA-SPTBN5 MGA chr15 42052727 - SPTBN5 chr15 42149908 - Exonic hg19 LUSC TCGA-85-8479-01A 24 15 In-Frame Intra-chr q15.1 Transcription factor q15.1 Seq+ 66772 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGA-WDR66 MGA chr15 42050037 - WDR66 chr12 122380440 + Exonic hg19 MESO TCGA-3H-AB3S-01A 5 4 Out-of-frame Inter-chr q15.1 Transcription factor q24.31 Seq+ 66773 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGAT4A-C2orf55 MGAT4A chr2 99342702 - C2orf55 chr2 99463273 - Exonic hg19 BRCA TCGA-3C-AALI-01A 10 7 CDS-5'UTR Intra-chr q11.2 66774 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGAT4A-C2orf55 MGAT4A chr2 99342702 - C2orf55 chr2 99463273 - Exonic hg19 LUAD TCGA-75-6211-01A 11 5 CDS-5'UTR Intra-chr q11.2 66775 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGAT4A-C2orf55 MGAT4A chr2 99251685 - C2orf55 chr2 99463273 - Exonic hg19 BRCA TCGA-B6-A0X1-01A 5 2 CDS-5'UTR Intra-chr q11.2 66776 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGAT4A-C2orf55 MGAT4A chr2 99271908 - C2orf55 chr2 99463273 - Exonic hg19 STAD TCGA-BR-8289-01A 2 8 CDS-5'UTR Intra-chr q11.2 66777 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGAT4A-C2orf55 MGAT4A chr2 99279509 - C2orf55 chr2 99411134 - Exonic hg19 UCS TCGA-N8-A4PP-01A 88 28 Out-of-frame Intra-chr q11.2 66778 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGAT4A-C2orf55 MGAT4A chr2 99342702 - C2orf55 chr2 99449460 - Exonic hg19 BRCA TCGA-PE-A5DC-01A 34 13 Out-of-frame Intra-chr q11.2 66779 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGAT4A-C2orf55 MGAT4A chr2 99342702 - C2orf55 chr2 99463273 - Exonic hg19 BLCA TCGA-UY-A78K-01A 5 3 CDS-5'UTR Intra-chr q11.2 66780 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGAT4A-FAM178B MGAT4A chr2 99342702 - FAM178B chr2 97568444 - Exonic hg19 READ TCGA-EI-6885-01A 15 13 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 66781 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGAT4B-ETF1 MGAT4B chr5 179233487 - ETF1 chr5 137854556 - Exonic hg19 SKCM TCGA-EE-A2M7-06A 32 17 Out-of-frame Intra-chr q31.2 Seq+ 66782 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGAT4B-RNF130 MGAT4B chr5 179225165 - RNF130 chr5 179347426 - Exonic hg19 SARC TCGA-N1-A6IA-01A 5 5 CDS-3'UTR Intra-chr q35.3 Seq+ 66783 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGAT4C-PLD1 MGAT4C chr12 86443452 - PLD1 chr3 171455872 - Exonic hg19 LUSC TCGA-46-6026-01A 2 1 5'UTR-5'UTR Inter-chr q26.31 Tumor suppressor gene 66784 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGAT4C-PPFIA2 MGAT4C chr12 86727843 - PPFIA2 chr12 81657169 - Exonic hg19 SARC TCGA-3B-A9HS-01A 8 7 5'UTR-CDS Intra-chr q21.31 Seq+ 66785 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGAT4C-SLC26A10 MGAT4C chr12 86727843 - SLC26A10 chr12 58018649 + Exonic hg19 SARC TCGA-3B-A9HS-01A 2 1 5'UTR-CDS Intra-chr q13.3 66786 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGAT5-MBD5 MGAT5 chr2 135028121 - MBD5 chr2 149215772 + Exonic hg19 STAD TCGA-CG-4466-01A 9 10 CDS-5'UTR Intra-chr q21.2 q23.1 Seq+ 66787 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGAT5B-CYP11A1 MGAT5B chr17 74878380 - CYP11A1 chr15 74640396 - Exonic hg19 BLCA TCGA-GV-A40E-01A 11 14 In-Frame Inter-chr q25.2 q24.1 Seq+ 66788 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGAT5B-VMP1 MGAT5B chr17 74878380 - VMP1 chr17 57842332 + Exonic hg19 KIRC TCGA-BP-4983-01A 36 20 Out-of-frame Intra-chr q25.2 q23.1 Seq+ 66789 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGMT-DOCK1 MGMT chr10 131334641 - DOCK1 chr10 129237291 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 3 5 In-Frame Intra-chr q26.3 q26.2 Seq+ 66790 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGMT-LGI4 MGMT chr10 131334641 - LGI4 chr19 35622946 - Exonic hg19 BRCA TCGA-AO-A03V-01A 5 8 In-Frame Inter-chr q26.3 q13.12 Seq+ 66791 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGRN1-C16orf96 MGRN1 chr16 4718313 - C16orf96 chr16 4621562 + Exonic hg19 LIHC TCGA-2Y-A9H6-01A 4 1 In-Frame Intra-chr p13.3 p13.3 Seq+ 66792 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGRN1-C16orf96 MGRN1 chr16 4675049 - C16orf96 chr16 4621562 + Exonic hg19 LUSC TCGA-77-8140-01A 16 5 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 66793 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGRN1-C16orf96 MGRN1 chr16 4675049 - C16orf96 chr16 4621562 + Exonic hg19 LIHC TCGA-BD-A2L6-01A 7 2 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 66794 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGRN1-C16orf96 MGRN1 chr16 4675049 - C16orf96 chr16 4621562 + Exonic hg19 SKCM TCGA-EE-A20F-06A 31 23 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 66795 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGRN1-DNAJA3 MGRN1 chr16 4727573 - DNAJA3 chr16 4504812 + Exonic hg19 LIHC TCGA-DD-A11A-01A 8 10 Out-of-frame Intra-chr p13.3 Tumor suppressor gene Seq+ 66796 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGRN1-SNX29 MGRN1 chr16 4715152 - SNX29 chr16 12571576 + Exonic hg19 HNSC TCGA-CV-7102-01A 6 12 In-Frame Intra-chr p13.3 p13.13 Seq+ 66797 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MGST1-COL27A1 MGST1 chr12 16500644 - COL27A1 chr9 117044557 + Exonic hg19 SARC TCGA-DX-A2J1-01A 3 3 5'UTR-CDS Inter-chr p12.3 q32 Seq+ 66798 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIB1-CABYR MIB1 chr18 19383975 - CABYR chr18 21735665 + Exonic hg19 BLCA TCGA-FJ-A3ZE-01A 23 17 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 66799 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIB1-GREB1L MIB1 chr18 19359646 - GREB1L chr18 19088079 + Exonic hg19 STAD TCGA-BR-8373-01A 4 24 Out-of-frame Intra-chr q11.2 q11.1 Seq+ 66800 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIB1-GREB1L MIB1 chr18 19321773 - GREB1L chr18 19085373 + Exonic hg19 PAAD TCGA-IB-A5SQ-01A 3 1 In-Frame Intra-chr q11.2 q11.1 Seq+ 66801 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIB1-HLTF MIB1 chr18 19353689 - HLTF chr3 148802676 - Exonic hg19 SARC TCGA-SI-A71Q-01A 2 3 Out-of-frame Inter-chr q11.2 q24 Tumor suppressor gene 66802 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIB1-MYO5B MIB1 chr18 19438607 - MYO5B chr18 47406825 - Exonic hg19 COAD TCGA-G4-6322-01A 40 23 In-Frame Intra-chr q11.2 q21.1 Seq+ 66803 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIB1-SNRPD1 MIB1 chr18 19359646 - SNRPD1 chr18 19202686 + Exonic hg19 LUAD TCGA-44-4112-01A 5 3 In-Frame Intra-chr q11.2 q11.2 Seq+ 66804 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIB2-ACVR1B MIB2 chr1 1559325 - ACVR1B chr12 52369049 + Exonic hg19 UCEC TCGA-FI-A3PV-01A 7 6 Out-of-frame Inter-chr p36.33 q13.13 Oncogene Seq+ 66805 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIB2-PLEKHN1 MIB2 chr1 1551994 - PLEKHN1 chr1 908241 + Exonic hg19 BRCA TCGA-A2-A0CR-01A 4 1 Out-of-frame Intra-chr p36.33 p36.33 66806 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIB2-RP4-761I2.2 MIB2 chr1 1551994 - RP4-761I2.2 chr6 11134636 + Exonic hg19 BRCA TCGA-C8-A12K-01A 49 19 Out-of-frame Inter-chr p36.33 66807 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MICA-NCR3 MICA chr6 31371479 - NCR3 chr6 31557903 - Exonic hg19 LGG TCGA-WH-A86K-01A 13 4 In-Frame Intra-chr p21.33 Seq+ 66808 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MICA-NCR3 MICA chr6 31368540 - NCR3 chr6 31557676 - Exonic hg19 MESO TCGA-XT-AASU-01A 304 25 5'UTR-CDS Intra-chr p21.33 Seq+ 66809 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MICAL1-AKD1 MICAL1 chr6 109771173 - AKD1 chr6 109819168 - Exonic hg19 BRCA TCGA-E9-A1RF-01A 60 28 Out-of-frame Intra-chr q21 Seq+ 66810 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MICAL2-NELL1 MICAL2 chr11 12183966 - NELL1 chr11 21392399 + Exonic hg19 SARC TCGA-DX-A1KU-01A 15 18 Out-of-frame Intra-chr p15.3 p15.1 Seq+ 66811 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MICAL3-ATAD1 MICAL3 chr22 18507047 - ATAD1 chr10 89574369 - Exonic hg19 PRAD TCGA-EJ-7315-01A 5 1 5'UTR-5'UTR Inter-chr q11.21 Seq+ 66812 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MICAL3-SLC25A18 MICAL3 chr22 18507047 - SLC25A18 chr22 18069902 + Exonic hg19 LUAD TCGA-05-4426-01A 10 1 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 66813 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MICALCL-HS2ST1 MICALCL chr11 12316404 - HS2ST1 chr1 87538617 + Exonic hg19 LUSC TCGA-66-2790-01A 3 2 In-Frame Inter-chr p15.3 p22.3 Seq+ 66814 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MICALCL-MICAL2 MICALCL chr11 12376404 - MICAL2 chr11 12278332 + Exonic hg19 PRAD TCGA-EJ-7793-01A 4 1 Out-of-frame Intra-chr p15.3 p15.3 66815 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MICALL1-DNAL4 MICALL1 chr22 38320724 - DNAL4 chr22 39178875 - Exonic hg19 SARC TCGA-DX-AB32-01A 3 1 CDS-5'UTR Intra-chr q13.1 q13.1 66816 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MICALL1-SHC1 MICALL1 chr22 38302575 - SHC1 chr1 154938993 - Exonic hg19 UCEC TCGA-PG-A914-01A 68 56 In-Frame Inter-chr q13.1 q21.3 Seq+ 66817 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MICALL2-CA3 MICALL2 chr7 1481828 - CA3 chr8 86354302 + Exonic hg19 ESCA TCGA-V5-A7RB-01A 9 64 In-Frame Inter-chr p22.3 q21.2 Seq+ 66818 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MICALL2-HDAC9 MICALL2 chr7 1484288 - HDAC9 chr7 18684294 + Exonic hg19 SKCM TCGA-EB-A44R-06A 7 9 Out-of-frame Intra-chr p22.3 p21.1 Seq+ 66819 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MICALL2-KLK1 MICALL2 chr7 1486349 - KLK1 chr19 51323699 - Exonic hg19 COAD TCGA-CK-6751-01A 2 3 In-Frame Inter-chr p22.3 q13.33 Seq+ 66820 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MICALL2-PSMG3 MICALL2 chr7 1498820 - PSMG3 chr7 1607486 - Exonic hg19 CESC TCGA-C5-A1BM-01A 60 37 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 66821 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MICALL2-SDK1 MICALL2 chr7 1498820 - SDK1 chr7 3658712 + Exonic hg19 LUAD TCGA-86-7955-01A 3 2 Out-of-frame Intra-chr p22.3 p22.2 Seq+ 66822 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MICALL2-UCKL1 MICALL2 chr7 1486349 - UCKL1 chr20 62572561 - Exonic hg19 COAD TCGA-CK-6751-01A 3 1 In-Frame Inter-chr p22.3 q13.33 Seq+ 66823 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MICU1-ARHGAP22 MICU1 chr10 74167687 - ARHGAP22 chr10 49654662 - Exonic hg19 BRCA TCGA-BH-A0HU-01A 47 25 Out-of-frame Intra-chr q22.1 q11.23 Seq+ 66824 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MICU1-PLA2G12B MICU1 chr10 74182992 - PLA2G12B chr10 74701092 - Exonic hg19 UCS TCGA-N6-A4VG-01A 7 1 In-Frame Intra-chr q22.1 q22.1 66825 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MICU1-TSPAN3 MICU1 chr10 74293504 - TSPAN3 chr15 77348597 - Exonic hg19 BRCA TCGA-AO-A03P-01A 23 25 In-Frame Inter-chr q22.1 q24.3 Seq+ 66826 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MID1-ARHGAP6 MID1 chrX 10588330 - ARHGAP6 chrX 11272827 - Exonic hg19 BRCA TCGA-A8-A094-01A 3 1 5'UTR-5'UTR Intra-chr p22.2 p22.2 66827 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MID1-ARHGAP6 MID1 chrX 10450520 - ARHGAP6 chrX 11272827 - Exonic hg19 LIHC TCGA-DD-AACH-01A 2 1 Out-of-frame Intra-chr p22.2 p22.2 66828 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MID1-DOCK11 MID1 chrX 10851673 - DOCK11 chrX 117796649 + Exonic hg19 COAD TCGA-AZ-4323-01A 30 11 5'UTR-CDS Intra-chr p22.2 q24 Seq+ 66829 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MID1-S100A2 MID1 chrX 10588330 - S100A2 chr1 153536363 - Exonic hg19 LUAD TCGA-L9-A444-01A 10 5 5'UTR-5'UTR Inter-chr p22.2 q21.3 Tumor suppressor gene Seq+ 66830 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIDN-HMHA1 MIDN chr19 1251900 - HMHA1 chr19 1079702 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 26 In-Frame Intra-chr p13.3 Seq+ 66831 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIDN-MAP7D1 MIDN chr19 1255693 - MAP7D1 chr1 36643474 + Exonic hg19 OV TCGA-04-1517-01A 12 5 Out-of-frame Inter-chr p13.3 p34.3 Seq+ 66832 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIER1-LEPR MIER1 chr1 67405735 - LEPR chr1 66036156 + Exonic hg19 SKCM TCGA-GF-A2C7-01A 5 1 In-Frame Intra-chr p31.3 p31.3 Seq+ 66833 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIER2-CDK5RAP1 MIER2 chr19 325635 - CDK5RAP1 chr20 31975339 - Exonic hg19 BLCA TCGA-BL-A0C8-01A 47 65 In-Frame Inter-chr p13.3 q11.21 Seq+ 66834 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIER2-SHC2 MIER2 chr19 311845 - SHC2 chr19 425231 - Exonic hg19 SKCM TCGA-GN-A265-06A 15 12 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 66835 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIER3-ABCC12 MIER3 chr5 56229074 - ABCC12 chr16 48130843 - Exonic hg19 PRAD TCGA-ZG-A9LZ-01A 5 3 Out-of-frame Inter-chr q11.2 q12.1 Seq+ 66836 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIF4GD-SDK2 MIF4GD chr17 73266195 - SDK2 chr17 71443887 - Exonic hg19 LUSC TCGA-43-2581-01A 2 2 Out-of-frame Intra-chr q25.1 q25.1 66837 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIIP-CMYA5 MIIP chr1 12090181 - CMYA5 chr5 79084794 + Exonic hg19 GBM TCGA-27-1835-01A 2 4 Out-of-frame Inter-chr p36.22 q14.1 Seq+ 66838 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MINK1-AC063977.1 MINK1 chr17 4736935 - AC063977.1 chr19 51670761 + Exonic hg19 PRAD TCGA-YL-A8SB-01A 11 2 Out-of-frame Inter-chr p13.2 q13.41 66839 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MINK1-ALOX12 MINK1 chr17 4736935 - ALOX12 chr17 6903655 + Exonic hg19 HNSC TCGA-D6-A6EN-01A 18 7 In-Frame Intra-chr p13.2 p13.1 Seq+ 66840 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MINK1-NQO2 MINK1 chr17 4736935 - NQO2 chr6 3010259 + Exonic hg19 LUAD TCGA-50-8460-01A 42 18 Out-of-frame Inter-chr p13.2 p25.2 Seq+ 66841 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MINK1-SPNS3 MINK1 chr17 4736935 - SPNS3 chr17 4381867 + Exonic hg19 STAD TCGA-CD-A486-01A 2 55 In-Frame Intra-chr p13.2 p13.2 Seq+ 66842 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MINK1-USO1 MINK1 chr17 4736935 - USO1 chr4 76720775 + Exonic hg19 LUAD TCGA-38-4632-01A 5 2 In-Frame Inter-chr p13.2 q21.1 Seq+ 66843 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MINPP1-ASXL2 MINPP1 chr10 89268290 - ASXL2 chr2 26068432 - Exonic hg19 LUSC TCGA-90-7769-01A 2 1 Out-of-frame Inter-chr q23.2 p23.3 66844 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MINPP1-LIPJ MINPP1 chr10 89280926 - LIPJ chr10 90365390 + Exonic hg19 PRAD TCGA-HC-7744-01A 8 16 Out-of-frame Intra-chr q23.2 q23.31 Seq+ 66845 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIOS-ADAP1 MIOS chr7 7613827 - ADAP1 chr7 975141 - Exonic hg19 BRCA TCGA-BH-A0B7-01A 3 6 In-Frame Intra-chr p21.3 p22.3 66846 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIPEP-GATAD2A MIPEP chr13 24432999 - GATAD2A chr19 19603115 + Exonic hg19 LGG TCGA-TM-A84B-01A 2 5 In-Frame Inter-chr q12.12 p13.11 Transcription factor 66847 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIPEP-MYO16 MIPEP chr13 24380089 - MYO16 chr13 109507791 + Exonic hg19 COAD TCGA-DM-A28F-01A 12 7 In-Frame Intra-chr q12.12 Seq+ 66848 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIPEP-TNFRSF19 MIPEP chr13 24410379 - TNFRSF19 chr13 24190006 + Exonic hg19 PRAD TCGA-EJ-5497-01A 4 1 In-Frame Intra-chr q12.12 q12.12 66849 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIPOL1-KIAA0391 MIPOL1 chr14 37777724 - KIAA0391 chr14 35735933 + Exonic hg19 BLCA TCGA-XF-AAMX-01A 3 3 In-Frame Intra-chr q13.3 q13.2 Seq+ 66850 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIPOL1-KIAA0391 MIPOL1 chr14 37777724 - KIAA0391 chr14 35742641 + Exonic hg19 PRAD TCGA-YL-A9WK-01A 10 5 In-Frame Intra-chr q13.3 q13.2 Seq+ 66851 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIPOL1-NLGN1 MIPOL1 chr14 37777724 - NLGN1 chr3 173993105 + Exonic hg19 BLCA TCGA-GC-A3YS-01A 3 2 Out-of-frame Inter-chr q13.3 q26.31 Seq+ 66852 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIPOL1-NPAS3 MIPOL1 chr14 37777724 - NPAS3 chr14 34081611 + Exonic hg19 LUAD TCGA-86-8358-01A 6 3 Out-of-frame Intra-chr q13.3 q13.1 Transcription factor 66853 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIPOL1-SCFD1 MIPOL1 chr14 37739730 - SCFD1 chr14 31118734 + Exonic hg19 SKCM TCGA-WE-A8ZX-06A 5 3 In-Frame Intra-chr q13.3 q12 Seq+ 66854 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIRLET7BHG-ATXN10 MIRLET7BHG chr22 46449800 - ATXN10 chr22 46202839 + Exonic hg19 LUAD TCGA-78-7220-01A 8 1 5'UTR-CDS Intra-chr q13.31 q13.31 66855 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIRLET7BHG-ATXN10 MIRLET7BHG chr22 46449800 - ATXN10 chr22 46202839 + Exonic hg19 BRCA TCGA-AQ-A04J-01A 26 25 5'UTR-CDS Intra-chr q13.31 q13.31 66856 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIRLET7BHG-COL4A1 MIRLET7BHG chr22 46449800 - COL4A1 chr13 110895081 - Exonic hg19 BRCA TCGA-AC-A2BK-01A 12 9 5'UTR-CDS Inter-chr q13.31 q34 Seq+ 66857 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIRLET7BHG-FBLN1 MIRLET7BHG chr22 46494438 - FBLN1 chr22 45996187 + Exonic hg19 LUSC TCGA-98-A538-01A 51 18 5'UTR-CDS Intra-chr q13.31 q13.31 Tumor suppressor gene Seq+ 66858 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIRLET7BHG-HKDC1 MIRLET7BHG chr22 46494438 - HKDC1 chr10 71025341 + Exonic hg19 BLCA TCGA-FD-A6TK-01A 29 14 5'UTR-CDS Inter-chr q13.31 q22.1 Seq+ 66859 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MIRLET7BHG-SCUBE1 MIRLET7BHG chr22 46499129 - SCUBE1 chr22 43735241 - Exonic hg19 HNSC TCGA-CN-6020-01A 23 17 5'UTR-CDS Intra-chr q13.31 q13.2 Seq+ 66860 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MITF-FOXP1 MITF chr3 70017484 - FOXP1 chr3 71007472 - Exonic hg19 SKCM TCGA-D3-A2JG-06A 5 2 Out-of-frame Intra-chr p13 Oncogene Transcription factor p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 66861 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MITF-MTERFD1 MITF chr3 69788852 - MTERFD1 chr8 97270928 - Exonic hg19 BRCA TCGA-EW-A1PC-01B 20 8 5'UTR-5'UTR Inter-chr p13 Oncogene Transcription factor Seq+ 66862 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MITF-PRICKLE2 MITF chr3 69788852 - PRICKLE2 chr3 64085601 - Exonic hg19 SKCM TCGA-D3-A2JG-06A 10 7 Out-of-frame Intra-chr p13 Oncogene Transcription factor p14.1 Seq+ 66863 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKI67IP-BTBD2 MKI67IP chr2 122494322 - BTBD2 chr19 1997462 - Exonic hg19 BRCA TCGA-A2-A1G1-01A 16 11 Out-of-frame Inter-chr p13.3 Seq+ 66864 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKKS-MMP24 MKKS chr20 10414756 - MMP24 chr20 33834643 + Exonic hg19 LUSC TCGA-22-A5C4-01A 4 8 5'UTR-CDS Intra-chr p12.2 q11.22 Seq+ 66865 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKL1-APOL4 MKL1 chr22 41032482 - APOL4 chr22 36598101 - Exonic hg19 LUAD TCGA-55-6978-01A 3 8 5'UTR-5'UTR Intra-chr q13.2 q12.3 Seq+ 66866 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKL1-ARAP1 MKL1 chr22 41032482 - ARAP1 chr11 72414124 - Exonic hg19 SKCM TCGA-EB-A3Y6-01A 11 5 5'UTR-CDS Inter-chr q13.2 q13.4 Seq+ 66867 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKL1-CSNK1E MKL1 chr22 40948110 - CSNK1E chr22 38710174 - Exonic hg19 SKCM TCGA-XV-A9W2-01A 11 3 5'UTR-5'UTR Intra-chr q13.2 q13.1 Seq+ 66868 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKL1-INPP5D MKL1 chr22 40948110 - INPP5D chr2 234077951 + Exonic hg19 UCS TCGA-N8-A4PQ-01A 15 9 5'UTR-CDS Inter-chr q13.2 Seq+ 66869 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKL1-KIAA0146 MKL1 chr22 41032482 - KIAA0146 chr8 48586363 + Exonic hg19 KIRC TCGA-AS-3777-01A 6 27 5'UTR-CDS Inter-chr q13.2 Seq+ 66870 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKL1-KIAA0146 MKL1 chr22 41032482 - KIAA0146 chr8 48586363 + Exonic hg19 LIHC TCGA-DD-A115-01A 74 42 5'UTR-CDS Inter-chr q13.2 Seq+ 66871 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKL1-NTNG1 MKL1 chr22 41032482 - NTNG1 chr1 107937776 + Exonic hg19 LUAD TCGA-69-7979-01A 6 3 5'UTR-CDS Inter-chr q13.2 p13.3 Seq+ 66872 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKL1-SCGB1C1 MKL1 chr22 40859225 - SCGB1C1 chr11 194418 + Exonic hg19 LUAD TCGA-MP-A4TK-01A 7 12 Out-of-frame Inter-chr q13.2 p15.5 Seq+ 66873 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKL1-SERPIND1 MKL1 chr22 40859225 - SERPIND1 chr22 21133585 + Exonic hg19 UCS TCGA-N6-A4VC-01A 2 1 CDS-5'UTR Intra-chr q13.2 q11.21 66874 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKL1-SLC25A17 MKL1 chr22 40990678 - SLC25A17 chr22 41195087 - Exonic hg19 LUSC TCGA-60-2706-01A 36 21 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 66875 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKL1-SLC25A17 MKL1 chr22 40948110 - SLC25A17 chr22 41175129 - Exonic hg19 STAD TCGA-B7-A5TN-01A 4 13 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 66876 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKL1-SLC25A17 MKL1 chr22 40859225 - SLC25A17 chr22 41175129 - Exonic hg19 ACC TCGA-OR-A5J7-01A 6 5 In-Frame Intra-chr q13.2 q13.2 Seq+ 66877 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKL1-SLC25A17 MKL1 chr22 41032482 - SLC25A17 chr22 41175129 - Exonic hg19 CESC TCGA-UC-A7PF-01A 16 5 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 66878 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKL1-TMEM218 MKL1 chr22 40819540 - TMEM218 chr11 124972705 - Exonic hg19 PRAD TCGA-EJ-8472-01A 4 3 CDS-5'UTR Inter-chr q13.2 q24.2 66879 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKL1-WFIKKN2 MKL1 chr22 40990678 - WFIKKN2 chr17 48916860 + Exonic hg19 LIHC TCGA-2Y-A9H0-01A 10 6 5'UTR-CDS Inter-chr q13.2 q21.33 Seq+ 66880 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKL2-C17orf39 MKL2 chr16 14312855 - C17orf39 chr17 17968494 + Exonic hg19 LUAD TCGA-S2-AA1A-01A 5 2 Out-of-frame Inter-chr p13.12 66881 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKL2-CACNA1H MKL2 chr16 14234617 - CACNA1H chr16 1250256 + Exonic hg19 BRCA TCGA-E9-A22A-01A 3 1 Out-of-frame Intra-chr p13.12 p13.3 Seq+ 66882 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKL2-FRMD4A MKL2 chr16 14312855 - FRMD4A chr10 13900912 - Exonic hg19 BLCA TCGA-CU-A3QU-01A 5 1 In-Frame Inter-chr p13.12 p13 66883 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKL2-FSTL3 MKL2 chr16 14234617 - FSTL3 chr19 681650 + Exonic hg19 BRCA TCGA-B6-A0RG-01A 10 1 In-Frame Inter-chr p13.12 p13.3 Seq+ 66884 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKL2-RBFOX1 MKL2 chr16 14234617 - RBFOX1 chr16 7568149 + Exonic hg19 OV TCGA-24-1842-01A 2 1 Out-of-frame Intra-chr p13.12 p13.3 Seq+ 66885 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKL2-RUNDC2A MKL2 chr16 14334341 - RUNDC2A chr16 12121177 + Exonic hg19 BRCA TCGA-A2-A04T-01A 12 11 Out-of-frame Intra-chr p13.12 66886 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKL2-SCNN1B MKL2 chr16 14312855 - SCNN1B chr16 23364122 + Exonic hg19 PRAD TCGA-KK-A8I7-01A 4 2 Out-of-frame Intra-chr p13.12 p12.2 Seq+ 66887 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKL2-ZNF200 MKL2 chr16 14328140 - ZNF200 chr16 3285360 - Exonic hg19 LGG TCGA-CS-5397-01A 2 5 Out-of-frame Intra-chr p13.12 p13.3 Transcription factor Seq+ 66888 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKLN1-AMTN MKLN1 chr7 130887733 - AMTN chr4 71394440 + Exonic hg19 PRAD TCGA-HC-7821-01A 10 5 5'UTR-CDS Inter-chr q32.3 q13.3 Seq+ 66889 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKLN1-CDK14 MKLN1 chr7 131082135 - CDK14 chr7 90376996 + Exonic hg19 SKCM TCGA-EE-A20I-06A 23 14 In-Frame Intra-chr q32.3 q21.13 Seq+ 66890 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKLN1-DNM3 MKLN1 chr7 131012756 - DNM3 chr1 171956796 + Exonic hg19 SARC TCGA-DX-A1L2-01A 11 3 Out-of-frame Inter-chr q32.3 q24.3 Seq+ 66891 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKLN1-EXOC4 MKLN1 chr7 131130662 - EXOC4 chr7 133682245 + Exonic hg19 COAD TCGA-G4-6315-01A 3 2 In-Frame Intra-chr q32.3 q33 66892 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKLN1-GRM8 MKLN1 chr7 131096142 - GRM8 chr7 126883569 - Exonic hg19 SKCM TCGA-EE-A20I-06A 7 7 CDS-5'UTR Intra-chr q32.3 q31.33 Oncogene Seq+ 66893 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKLN1-IMMP2L MKLN1 chr7 131130662 - IMMP2L chr7 110303777 - Exonic hg19 LUAD TCGA-38-4631-01A 22 11 Out-of-frame Intra-chr q32.3 q31.1 66894 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKLN1-NRF1 MKLN1 chr7 131122756 - NRF1 chr7 129367081 + Exonic hg19 SKCM TCGA-ER-A19T-06A 4 6 Out-of-frame Intra-chr q32.3 q32.2 Tumor suppressor gene Transcription factor Seq+ 66895 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKNK1-KIAA0494 MKNK1 chr1 47082383 - KIAA0494 chr1 47182115 - Exonic hg19 UCEC TCGA-KP-A3W4-01A 9 4 5'UTR-CDS Intra-chr p33 66896 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKNK2-FAM151A MKNK2 chr19 2046185 - FAM151A chr1 55076228 - Exonic hg19 BRCA TCGA-EW-A1PA-01A 6 6 Out-of-frame Inter-chr p13.3 p32.3 Seq+ 66897 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKNK2-RNF126 MKNK2 chr19 2041839 - RNF126 chr19 652884 - Exonic hg19 LAML TCGA-AB-2897-03A 2 5 In-Frame Intra-chr p13.3 p13.3 Seq+ 66898 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKNK2-ZFR2 MKNK2 chr19 2046366 - ZFR2 chr19 3852612 - Exonic hg19 BRCA TCGA-BH-A1FD-01A 10 25 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 66899 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKRN1-BRAF MKRN1 chr7 140158807 - BRAF chr7 140487384 - Exonic hg19 THCA TCGA-J8-A3O1-01A 21 34 In-Frame Intra-chr q34 q34 TKL:RAF Oncogene KB Pub Seq+ 66900 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKRN1-DENND2A MKRN1 chr7 140171683 - DENND2A chr7 140246739 - Exonic hg19 BLCA TCGA-DK-A6B2-01A 86 40 Out-of-frame Intra-chr q34 q34 Seq+ 66901 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKRN1-DENND2A MKRN1 chr7 140156452 - DENND2A chr7 140219518 - Exonic hg19 LGG TCGA-HT-A5RA-01A 12 8 Out-of-frame Intra-chr q34 q34 Seq+ 66902 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKRN1-MRPS33 MKRN1 chr7 140178960 - MRPS33 chr7 140710460 - Exonic hg19 OV TCGA-36-1577-01A 58 70 CDS-5'UTR Intra-chr q34 q34 Seq+ 66903 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKRN1-NLGN1 MKRN1 chr7 140171683 - NLGN1 chr3 173993105 + Exonic hg19 SARC TCGA-DX-A23R-01A 13 4 Out-of-frame Inter-chr q34 q26.31 Seq+ 66904 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKRN2-KIAA1407 MKRN2 chr3 12598675 - KIAA1407 chr3 113720543 - Exonic hg19 BRCA TCGA-AQ-A04J-01A 3 3 Out-of-frame Intra-chr p25.2 66905 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKRN2-PPARG MKRN2 chr3 12598675 - PPARG chr3 12353879 + Exonic hg19 BLCA TCGA-UY-A78K-01A 17 12 CDS-5'UTR Intra-chr p25.2 p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 66906 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKRN2-PPARG MKRN2 chr3 12598675 - PPARG chr3 12353879 + Exonic hg19 BLCA TCGA-XF-AAML-01A 19 8 CDS-5'UTR Intra-chr p25.2 p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 66907 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKS1-KSR1 MKS1 chr17 56293449 - KSR1 chr17 25909672 + Exonic hg19 BRCA TCGA-E2-A14V-01A 2 4 Out-of-frame Intra-chr q22 q11.2 TKL:RAF Seq+ 66908 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MKS1-SPAG9 MKS1 chr17 56288020 - SPAG9 chr17 49109083 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 27 14 Out-of-frame Intra-chr q22 q21.33 Seq+ 66909 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLEC-STX2 MLEC chr12 121125334 - STX2 chr12 131306333 - Exonic hg19 SARC TCGA-QC-AA9N-01A 4 1 Out-of-frame Intra-chr q24.31 q24.33 66910 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLF1-RSRC1 MLF1 chr3 158310370 - RSRC1 chr3 158261124 + Exonic hg19 BLCA TCGA-4Z-AA7Q-01A 8 9 In-Frame Intra-chr q25.32 q25.32 Seq+ 66911 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLF2-PTMS MLF2 chr12 6860807 - PTMS chr12 6878769 + Exonic hg19 BRCA TCGA-E2-A14T-01A 52 34 In-Frame Intra-chr p13.31 p13.31 Seq+ 66912 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL-ATP5L MLL chr11 118353210 - ATP5L chr11 118301739 + Exonic hg19 ACC TCGA-OR-A5J1-01A 14 3 Out-of-frame Intra-chr q23.3 q23.3 66913 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL-CD86 MLL chr11 118355690 - CD86 chr3 121838285 + Exonic hg19 CESC TCGA-C5-A1M7-01A 2 1 Out-of-frame Inter-chr q23.3 q13.33 66914 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL-ELL MLL chr11 118353210 - ELL chr19 18576728 - Exonic hg19 LAML TCGA-AB-2834-03A 14 18 In-Frame Inter-chr q23.3 p13.11 66915 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL-ELL MLL chr11 118355029 - ELL chr19 18583692 - Exonic hg19 LAML TCGA-AB-2844-03A 25 13 In-Frame Inter-chr q23.3 p13.11 66916 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL-ELL MLL chr11 118355690 - ELL chr19 18569139 - Exonic hg19 LAML TCGA-AB-2911-03A 6 10 In-Frame Inter-chr q23.3 p13.11 66917 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL-FYN MLL chr11 118382740 - FYN chr6 112025305 - Exonic hg19 LUAD TCGA-97-8174-01A 14 18 Out-of-frame Inter-chr q23.3 q21 TK:Src Seq+ 66918 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL-IGHMBP2 MLL chr11 118382740 - IGHMBP2 chr11 68685204 + Exonic hg19 LGG TCGA-DU-A7T6-01A 4 5 Out-of-frame Intra-chr q23.3 q13.3 66919 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL-MLLT10 MLL chr11 118355029 - MLLT10 chr10 21959378 + Exonic hg19 LAML TCGA-AB-2832-03A 6 7 Out-of-frame Inter-chr q23.3 p12.31 Oncogene 66920 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL-MLLT10 MLL chr11 118353210 - MLLT10 chr10 21875223 + Exonic hg19 LAML TCGA-AB-2842-03A 4 15 Out-of-frame Inter-chr q23.3 p12.31 Oncogene 66921 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL-MLLT10 MLL chr11 118355690 - MLLT10 chr10 21940602 + Exonic hg19 LAML TCGA-AB-2985-03A 4 9 Out-of-frame Inter-chr q23.3 p12.31 Oncogene 66922 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL-MLLT10 MLL chr11 118350953 - MLLT10 chr10 22002701 + Exonic hg19 LAML TCGA-AB-3005-03A 7 9 Out-of-frame Inter-chr q23.3 p12.31 Oncogene 66923 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL-MLLT3 MLL chr11 118353210 - MLLT3 chr9 20365742 - Exonic hg19 LAML TCGA-AB-2956-03A 9 9 Out-of-frame Inter-chr q23.3 p21.3 66924 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL-MLLT4 MLL chr11 118355029 - MLLT4 chr6 168265231 + Exonic hg19 LAML TCGA-AB-2883-03A 13 16 Out-of-frame Inter-chr q23.3 66925 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL-MLLT4 MLL chr11 118353210 - MLLT4 chr6 168265231 + Exonic hg19 LAML TCGA-AB-2893-03A 10 11 Out-of-frame Inter-chr q23.3 66926 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL-SLC22A10 MLL chr11 118345030 - SLC22A10 chr11 63137095 + Exonic hg19 BLCA TCGA-BT-A2LA-01A 2 3 Out-of-frame Intra-chr q23.3 q12.3 66927 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL-ZDHHC7 MLL chr11 118307659 - ZDHHC7 chr16 85010831 - Exonic hg19 SKCM TCGA-EB-A4XL-01A 9 4 Out-of-frame Inter-chr q23.3 q24.1 66928 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL2-CUX2 MLL2 chr12 49418361 - CUX2 chr12 111729222 + Exonic hg19 LUSC TCGA-77-7337-01A 7 1 Out-of-frame Intra-chr q24.11 Transcription factor 66929 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL2-LMBR1L MLL2 chr12 49439703 - LMBR1L chr12 49500828 - Exonic hg19 OV TCGA-13-0893-01B 3 3 Out-of-frame Intra-chr q13.12 66930 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL2-PTPRR MLL2 chr12 49453396 - PTPRR chr12 71158558 - Exonic hg19 PAAD TCGA-2J-AAB4-01A 3 2 5'UTR-CDS Intra-chr q15 66931 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL2-RHEBL1 MLL2 chr12 49439703 - RHEBL1 chr12 49460818 - Exonic hg19 OV TCGA-09-1662-01A 11 3 In-Frame Intra-chr q13.12 66932 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL3-AGK MLL3 chr7 151864231 - AGK chr7 141292946 + Exonic hg19 LUSC TCGA-NC-A5HF-01A 3 1 Out-of-frame Intra-chr Tumor suppressor gene 66933 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL3-AUTS2 MLL3 chr7 152132711 - AUTS2 chr7 69900738 + Exonic hg19 BRCA TCGA-A8-A07C-01A 21 26 Out-of-frame Intra-chr Tumor suppressor gene q11.22 Seq+ 66934 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL3-CALN1 MLL3 chr7 151859202 - CALN1 chr7 71571279 - Exonic hg19 BRCA TCGA-AO-A124-01A 15 3 Out-of-frame Intra-chr Tumor suppressor gene q11.22 66935 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL3-CLIP2 MLL3 chr7 151871216 - CLIP2 chr7 73811404 + Exonic hg19 BRCA TCGA-AO-A126-01A 10 25 In-Frame Intra-chr Tumor suppressor gene q11.23 Seq+ 66936 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL3-CNTNAP2 MLL3 chr7 152027686 - CNTNAP2 chr7 146740999 + Exonic hg19 BRCA TCGA-BH-A0DI-01A 4 4 Out-of-frame Intra-chr Tumor suppressor gene Tumor suppressor gene Seq+ 66937 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL3-CNTNAP2 MLL3 chr7 152132711 - CNTNAP2 chr7 146471363 + Exonic hg19 BRCA TCGA-C8-A273-01A 17 10 Out-of-frame Intra-chr Tumor suppressor gene Tumor suppressor gene Seq+ 66938 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL3-DNAH11 MLL3 chr7 152007051 - DNAH11 chr7 21856085 + Exonic hg19 CESC TCGA-DS-A1OC-01A 47 27 In-Frame Intra-chr Tumor suppressor gene p15.3 Seq+ 66939 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL3-FUT9 MLL3 chr7 151949024 - FUT9 chr6 96651024 + Exonic hg19 PRAD TCGA-YL-A8SP-01B 12 9 CDS-5'UTR Inter-chr Tumor suppressor gene q16.1 66940 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL3-GALNTL5 MLL3 chr7 152132711 - GALNTL5 chr7 151668030 + Exonic hg19 OV TCGA-61-1917-01A 2 5 Out-of-frame Intra-chr Tumor suppressor gene q36.1 Seq+ 66941 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL3-GALNTL5 MLL3 chr7 152055672 - GALNTL5 chr7 151716731 + Exonic hg19 STAD TCGA-BR-4363-01A 2 3 Out-of-frame Intra-chr Tumor suppressor gene q36.1 Seq+ 66942 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL3-GTF2IRD1 MLL3 chr7 151902191 - GTF2IRD1 chr7 74004180 + Exonic hg19 HNSC TCGA-CV-7440-01A 8 9 In-Frame Intra-chr Tumor suppressor gene q11.23 Transcription factor 66943 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL3-IRF5 MLL3 chr7 152007051 - IRF5 chr7 128582125 + Exonic hg19 SKCM TCGA-D3-A3C3-06A 6 11 CDS-5'UTR Intra-chr Tumor suppressor gene q32.1 Tumor suppressor gene Transcription factor 66944 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL3-LHFPL3 MLL3 chr7 152132711 - LHFPL3 chr7 104377122 + Exonic hg19 SKCM TCGA-D3-A3C1-06A 33 29 Out-of-frame Intra-chr Tumor suppressor gene q22.2 66945 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL3-LMTK3 MLL3 chr7 151845118 - LMTK3 chr19 48997366 - Exonic hg19 READ TCGA-DC-6154-01A 7 6 In-Frame Inter-chr Tumor suppressor gene q13.33 66946 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL3-NDUFAF4 MLL3 chr7 151854846 - NDUFAF4 chr6 97344723 - Exonic hg19 PRAD TCGA-2A-A8VT-01A 7 7 Out-of-frame Inter-chr Tumor suppressor gene q16.1 66947 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL3-SND1 MLL3 chr7 152132711 - SND1 chr7 127447538 + Exonic hg19 ESCA TCGA-L5-A8NI-01A 2 33 Out-of-frame Intra-chr Tumor suppressor gene q32.1 Seq+ 66948 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL3-SYTL5 MLL3 chr7 152132711 - SYTL5 chrX 37913466 + Exonic hg19 LUAD TCGA-97-8179-01A 4 7 In-Frame Inter-chr Tumor suppressor gene p11.4 66949 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL3-XRCC2 MLL3 chr7 152007051 - XRCC2 chr7 152357867 - Exonic hg19 SKCM TCGA-BF-A1PV-01A 8 4 In-Frame Intra-chr Tumor suppressor gene q36.1 Oncogene 66950 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL5-KIAA1267 MLL5 chr7 104681470 - KIAA1267 chr17 44249598 - Exonic hg19 STAD TCGA-CD-8535-01A 4 37 Out-of-frame Inter-chr 66951 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104654982 - LHFPL3 chr7 104546634 + Exonic hg19 OV TCGA-24-0970-01B 18 13 5'UTR-CDS Intra-chr q22.2 Seq+ 66952 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104707254 - LHFPL3 chr7 104546634 + Exonic hg19 LUAD TCGA-44-5644-01A 17 9 Out-of-frame Intra-chr q22.2 Seq+ 66953 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104722244 - LHFPL3 chr7 104546634 + Exonic hg19 LUAD TCGA-55-7727-01A 13 7 Out-of-frame Intra-chr q22.2 Seq+ 66954 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104654982 - LHFPL3 chr7 104546634 + Exonic hg19 UCEC TCGA-A5-A7WK-01A 96 108 5'UTR-CDS Intra-chr q22.2 Seq+ 66955 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104717880 - LHFPL3 chr7 104377122 + Exonic hg19 UCEC TCGA-AX-A2H4-01A 10 4 Out-of-frame Intra-chr q22.2 Seq+ 66956 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104681470 - LHFPL3 chr7 104377122 + Exonic hg19 LIHC TCGA-BC-A10R-01A 2 1 Out-of-frame Intra-chr q22.2 Seq+ 66957 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104654982 - LHFPL3 chr7 104546634 + Exonic hg19 STAD TCGA-BR-4357-01A 13 22 5'UTR-CDS Intra-chr q22.2 Seq+ 66958 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104707254 - LHFPL3 chr7 104546634 + Exonic hg19 STAD TCGA-BR-8289-01A 4 17 Out-of-frame Intra-chr q22.2 Seq+ 66959 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104681470 - LHFPL3 chr7 104546634 + Exonic hg19 STAD TCGA-BR-8373-01A 5 24 Out-of-frame Intra-chr q22.2 Seq+ 66960 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104654982 - LHFPL3 chr7 104546634 + Exonic hg19 BRCA TCGA-E2-A1LK-01A 6 9 5'UTR-CDS Intra-chr q22.2 Seq+ 66961 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104681470 - LHFPL3 chr7 104546634 + Exonic hg19 SKCM TCGA-EB-A3Y6-01A 4 2 Out-of-frame Intra-chr q22.2 Seq+ 66962 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104681470 - LHFPL3 chr7 104546634 + Exonic hg19 ESCA TCGA-L5-A8NI-01A 7 28 Out-of-frame Intra-chr q22.2 Seq+ 66963 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104730720 - LHFPL3 chr7 104377122 + Exonic hg19 UCS TCGA-NA-A4R1-01A 269 39 Out-of-frame Intra-chr q22.2 Seq+ 66964 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL5-LHFPL3 MLL5 chr7 104654982 - LHFPL3 chr7 104377122 + Exonic hg19 STAD TCGA-VQ-A925-01A 2 37 5'UTR-CDS Intra-chr q22.2 Seq+ 66965 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL5-MAP2K3 MLL5 chr7 104715262 - MAP2K3 chr17 21215454 + Exonic hg19 SARC TCGA-SI-AA8C-01A 2 10 In-Frame Inter-chr p11.2 STE:STE7 66966 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL5-PTPRZ1 MLL5 chr7 104654982 - PTPRZ1 chr7 121568210 + Exonic hg19 STAD TCGA-CG-4477-01A 6 8 5'UTR-CDS Intra-chr q31.32 66967 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL5-RAPGEF1 MLL5 chr7 104722244 - RAPGEF1 chr9 134479440 - Exonic hg19 STAD TCGA-BR-4357-01A 8 5 Out-of-frame Inter-chr q34.13 66968 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLL5-TUFT1 MLL5 chr7 104748372 - TUFT1 chr1 151542133 + Exonic hg19 COAD TCGA-A6-5660-01A 12 5 In-Frame Inter-chr q21.3 Seq+ 66969 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT1-CRLF1 MLLT1 chr19 6230581 - CRLF1 chr19 18710656 - Exonic hg19 SARC TCGA-3B-A9HL-01A 4 1 Out-of-frame Intra-chr p13.3 p13.11 Seq+ 66970 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT1-PRLR MLLT1 chr19 6270590 - PRLR chr5 35118224 - Exonic hg19 ACC TCGA-OR-A5K9-01A 6 1 CDS-5'UTR Inter-chr p13.3 p13.2 Seq+ 66971 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT1-ZNF439 MLLT1 chr19 6262239 - ZNF439 chr19 11977011 + Exonic hg19 SKCM TCGA-EB-A44O-01A 2 3 Out-of-frame Intra-chr p13.3 p13.2 Transcription factor Seq+ 66972 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT10-ASCC1 MLLT10 chr10 21906136 - ASCC1 chr10 73892939 - Exonic hg19 COAD TCGA-D5-6922-01A 10 2 Out-of-frame Intra-chr p12.31 Oncogene q22.1 Seq+ 66973 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT10-C10orf140 MLLT10 chr10 21906136 - C10orf140 chr10 21812800 - Exonic hg19 LIHC TCGA-DD-A73G-01A 5 4 CDS-5'UTR Intra-chr p12.31 Oncogene 66974 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT10-KCNJ6 MLLT10 chr10 21827841 - KCNJ6 chr21 39087434 - Exonic hg19 LUAD TCGA-O1-A52J-01A 7 3 Out-of-frame Inter-chr p12.31 Oncogene q22.13 Seq+ 66975 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT10-MINPP1 MLLT10 chr10 21823733 - MINPP1 chr10 89311839 + Exonic hg19 LIHC TCGA-BD-A2L6-01A 19 10 In-Frame Intra-chr p12.31 Oncogene q23.2 Seq+ 66976 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT10-PICALM MLLT10 chr10 21906136 - PICALM chr11 85670103 - Exonic hg19 LAML TCGA-AB-2849-03A 7 18 In-Frame Inter-chr p12.31 Oncogene q14.2 KB Pub Seq+ 66977 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT10-PICALM MLLT10 chr10 21906136 - PICALM chr11 85670103 - Exonic hg19 LAML TCGA-AB-2855-03A 3 9 In-Frame Inter-chr p12.31 Oncogene q14.2 KB Pub Seq+ 66978 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT10-SLC16A1 MLLT10 chr10 21823733 - SLC16A1 chr1 113471974 - Exonic hg19 SKCM TCGA-RP-A695-06A 23 22 CDS-5'UTR Inter-chr p12.31 Oncogene Seq+ 66979 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT10-SNTG1 MLLT10 chr10 22024164 - SNTG1 chr8 51415338 + Exonic hg19 BRCA TCGA-C8-A278-01A 5 8 In-Frame Inter-chr p12.31 Oncogene q11.21 Seq+ 66980 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT10-WAC MLLT10 chr10 21906136 - WAC chr10 28824491 + Exonic hg19 LGG TCGA-TQ-A7RV-01A 8 10 In-Frame Intra-chr p12.31 Oncogene p12.1 Seq+ 66981 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT10-WAC MLLT10 chr10 21906136 - WAC chr10 28824491 + Exonic hg19 LGG TCGA-TQ-A7RV-02A 11 2 In-Frame Intra-chr p12.31 Oncogene p12.1 Seq+ 66982 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT3-BNC2 MLLT3 chr9 20620653 - BNC2 chr9 16437522 - Exonic hg19 SARC TCGA-DX-AB2E-01A 5 6 Out-of-frame Intra-chr p21.3 p22.2 Transcription factor Seq+ 66983 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT3-CISD3 MLLT3 chr9 20620653 - CISD3 chr17 36887013 + Exonic hg19 BRCA TCGA-C8-A132-01A 35 32 Out-of-frame Inter-chr p21.3 Seq+ 66984 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT3-IZUMO3 MLLT3 chr9 20620653 - IZUMO3 chr9 24545059 - Exonic hg19 GBM TCGA-32-5222-01A 4 4 Out-of-frame Intra-chr p21.3 p21.3 Seq+ 66985 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT3-PALM2 MLLT3 chr9 20620653 - PALM2 chr9 112629771 + Exonic hg19 LGG TCGA-FG-A87N-01A 4 2 Out-of-frame Intra-chr p21.3 q31.3 Seq+ 66986 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT3-SLC28A3 MLLT3 chr9 20456702 - SLC28A3 chr9 86928369 - Exonic hg19 BRCA TCGA-A2-A0CU-01A 7 1 In-Frame Intra-chr p21.3 q21.33 Seq+ 66987 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT3-SYT10 MLLT3 chr9 20620653 - SYT10 chr12 33560291 - Exonic hg19 MESO TCGA-LK-A4O5-01A 9 1 Out-of-frame Inter-chr p21.3 p11.1 Seq+ 66988 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT3-TYRP1 MLLT3 chr9 20456702 - TYRP1 chr9 12693912 + Exonic hg19 LGG TCGA-VM-A8C8-01A 10 12 CDS-5'UTR Intra-chr p21.3 p23 Seq+ 66989 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT4-EXOC6B MLLT4 chr6 168303066 - EXOC6B chr2 72802797 - Exonic hg19 PRAD TCGA-EJ-A7NF-01A 4 2 In-Frame Inter-chr p13.2 Seq+ 66990 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT4-GMDS MLLT4 chr6 168227917 - GMDS chr6 1742820 - Exonic hg19 LUSC TCGA-98-8023-01A 6 1 In-Frame Intra-chr p25.3 66991 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT4-HMGCLL1 MLLT4 chr6 168271178 - HMGCLL1 chr6 55406938 - Exonic hg19 BRCA TCGA-A8-A07C-01A 10 2 In-Frame Intra-chr p12.1 66992 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT4-KCNAB1 MLLT4 chr6 168227917 - KCNAB1 chr3 156232153 + Exonic hg19 BRCA TCGA-HN-A2NL-01A 43 28 Out-of-frame Inter-chr q25.31 Seq+ 66993 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT4-MLL MLLT4 chr6 168227917 - MLL chr11 118352430 + Exonic hg19 LAML TCGA-AB-2893-03A 11 2 Out-of-frame Inter-chr q23.3 66994 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT4-SASH1 MLLT4 chr6 168281197 - SASH1 chr6 148711270 + Exonic hg19 LGG TCGA-HT-A5RC-01A 17 5 In-Frame Intra-chr q24.3 Tumor suppressor gene Seq+ 66995 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT4-SYK MLLT4 chr6 168227917 - SYK chr9 93606140 + Exonic hg19 PRAD TCGA-V1-A9OY-01A 3 6 CDS-5'UTR Inter-chr q22.2 TK:Syk Oncogene Tumor suppressor gene Seq+ 66996 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT4-TTLL2 MLLT4 chr6 168227917 - TTLL2 chr6 167752135 + Exonic hg19 KIRC TCGA-B2-3924-01A 12 2 Out-of-frame Intra-chr q27 Seq+ 66997 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT4-UNC93A MLLT4 chr6 168227917 - UNC93A chr6 167717407 + Exonic hg19 OV TCGA-13-1408-01A 2 3 Out-of-frame Intra-chr q27 Seq+ 66998 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT6-AATF MLLT6 chr17 36864125 - AATF chr17 35345818 + Exonic hg19 KIRC TCGA-B0-5088-01A 13 5 Out-of-frame Intra-chr q12 Seq+ 66999 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT6-ACE MLLT6 chr17 36868267 - ACE chr17 61573755 + Exonic hg19 BRCA TCGA-C8-A26X-01A 26 5 Out-of-frame Intra-chr q12 q23.3 Seq+ 67000 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT6-KIRREL3 MLLT6 chr17 36865828 - KIRREL3 chr11 126343361 - Exonic hg19 BRCA TCGA-AR-A2LJ-01A 8 2 Out-of-frame Inter-chr q12 q24.2 Seq+ 67001 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLLT6-PPP1R12A MLLT6 chr17 36879021 - PPP1R12A chr12 80242711 - Exonic hg19 LGG TCGA-DU-A5TP-01A 2 3 Out-of-frame Inter-chr q12 q21.31 67002 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLXIP-ANKS1B MLXIP chr12 122517172 - ANKS1B chr12 99478801 - Exonic hg19 SARC TCGA-DX-A3LS-01A 2 2 Out-of-frame Intra-chr Transcription factor q23.1 Seq+ 67003 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLXIP-ASH2L MLXIP chr12 122517172 - ASH2L chr8 37996334 + Exonic hg19 SARC TCGA-DX-A3LS-01A 85 15 Out-of-frame Inter-chr Transcription factor p11.23 Seq+ 67004 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLXIP-TSPAN8 MLXIP chr12 122517172 - TSPAN8 chr12 71835367 - Exonic hg19 SARC TCGA-DX-A3LS-01A 68 9 Out-of-frame Intra-chr Transcription factor q21.1 Seq+ 67005 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MLYCD-MGRN1 MLYCD chr16 83945972 - MGRN1 chr16 4718266 + Exonic hg19 PRAD TCGA-EJ-5524-01A 28 12 In-Frame Intra-chr q23.3 p13.3 Seq+ 67006 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MMACHC-TTC23L MMACHC chr1 45966085 - TTC23L chr5 34896875 + Exonic hg19 ACC TCGA-OR-A5LL-01A 7 1 In-Frame Inter-chr p34.1 p13.2 Seq+ 67007 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MMD-APPBP2 MMD chr17 53499031 - APPBP2 chr17 58543820 - Exonic hg19 CESC TCGA-VS-A9UP-01A 6 6 In-Frame Intra-chr q22 q23.2 Seq+ 67008 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MMD-C20orf112 MMD chr17 53485107 - C20orf112 chr20 31115716 - Exonic hg19 BRCA TCGA-C8-A273-01A 2 2 Out-of-frame Inter-chr q22 67009 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MMD-HDAC5 MMD chr17 53499031 - HDAC5 chr17 42165966 - Exonic hg19 ESCA TCGA-V5-A7RE-01A 19 55 Out-of-frame Intra-chr q22 q21.31 Seq+ 67010 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MMP11-GAS2L1 MMP11 chr22 24115165 - GAS2L1 chr22 29706429 + Exonic hg19 PRAD TCGA-V1-A8WN-01A 4 10 In-Frame Intra-chr q11.23 q12.2 Seq+ 67011 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MMP13-SUPT16H MMP13 chr11 102813724 - SUPT16H chr14 21829491 - Exonic hg19 SARC TCGA-DX-AB2E-01A 2 3 Out-of-frame Inter-chr q22.2 q11.2 67012 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MMP14-CCT5 MMP14 chr14 23316970 - CCT5 chr5 10250033 + Exonic hg19 SARC TCGA-IW-A3M6-01A 2 2 Out-of-frame Inter-chr q11.2 p15.2 67013 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MMP14-RBM23 MMP14 chr14 23306134 - RBM23 chr14 23371591 - Exonic hg19 KICH TCGA-KL-8339-01A 24 10 In-Frame Intra-chr q11.2 q11.2 Seq+ 67014 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MMP15-CCDC135 MMP15 chr16 58060416 - CCDC135 chr16 57761211 + Exonic hg19 STAD TCGA-BR-8080-01A 5 39 In-Frame Intra-chr q21 Seq+ 67015 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MMP15-CCDC135 MMP15 chr16 58077531 - CCDC135 chr16 57759980 + Exonic hg19 PRAD TCGA-XJ-A9DX-01A 6 2 Out-of-frame Intra-chr q21 Seq+ 67016 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MMP15-CDH5 MMP15 chr16 58060416 - CDH5 chr16 66413222 + Exonic hg19 BLCA TCGA-GC-A3RB-01A 2 10 CDS-5'UTR Intra-chr q21 q21 Oncogene Tumor suppressor gene Seq+ 67017 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MMP26-GUCY2F MMP26 chr11 4788571 - GUCY2F chrX 108652397 - Exonic hg19 PRAD TCGA-J4-A67L-01A 2 1 5'UTR-CDS Inter-chr p15.4 q23 67018 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MMP28-KCNJ12 MMP28 chr17 34105892 - KCNJ12 chr17 21311831 + Exonic hg19 LUAD TCGA-55-7911-01A 4 2 CDS-5'UTR Intra-chr q12 p11.2 Seq+ 67019 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MMP9-UTRN MMP9 chr20 44645199 - UTRN chr6 144665237 + Exonic hg19 HNSC TCGA-CR-7382-01A 2 3 Out-of-frame Inter-chr q13.12 q24.2 67020 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MMS19-CRTAC1 MMS19 chr10 99258030 - CRTAC1 chr10 99667904 - Exonic hg19 GBM TCGA-06-0214-01A 7 8 In-Frame Intra-chr q24.1 q24.2 Seq+ 67021 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MMS19-MICU1 MMS19 chr10 99258030 - MICU1 chr10 74326552 - Exonic hg19 HNSC TCGA-4P-AA8J-01A 8 2 CDS-5'UTR Intra-chr q24.1 q22.1 Seq+ 67022 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MMS19-NDUFV1 MMS19 chr10 99218083 - NDUFV1 chr11 67375697 + Exonic hg19 ACC TCGA-OR-A5K5-01A 2 4 Out-of-frame Inter-chr q24.1 q13.2 67023 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MNAT1-C14orf135 MNAT1 chr14 61264878 - C14orf135 chr14 60600688 + Exonic hg19 BRCA TCGA-OL-A5S0-01A 4 3 Out-of-frame Intra-chr q23.1 67024 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MNAT1-MUDENG MNAT1 chr14 61346553 - MUDENG chr14 57740962 + Exonic hg19 LUSC TCGA-LA-A7SW-01A 11 7 Out-of-frame Intra-chr q23.1 67025 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MNAT1-RASGEF1B MNAT1 chr14 61201669 - RASGEF1B chr4 82380668 - Exonic hg19 PRAD TCGA-KK-A6E1-01A 4 1 CDS-5'UTR Inter-chr q23.1 q21.22 Seq+ 67026 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MNAT1-SIX1 MNAT1 chr14 61201669 - SIX1 chr14 61113295 - Exonic hg19 LUAD TCGA-55-1592-01A 12 6 In-Frame Intra-chr q23.1 q23.1 Transcription factor Seq+ 67027 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MNAT1-SPSB1 MNAT1 chr14 61346553 - SPSB1 chr1 9427507 + Exonic hg19 LUSC TCGA-77-8131-01A 11 3 Out-of-frame Inter-chr q23.1 p36.22 Seq+ 67028 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MND1-ARFIP1 MND1 chr4 154279774 - ARFIP1 chr4 153784758 + Exonic hg19 BRCA TCGA-A7-A13D-01A 4 2 In-Frame Intra-chr q31.3 q31.3 Seq+ 67029 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MOBKL1A-MUC7 MOBKL1A chr4 71768267 - MUC7 chr4 71337932 + Exonic hg19 OV TCGA-25-1322-01A 2 1 Out-of-frame Intra-chr Tumor suppressor gene q13.3 67030 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MOBKL1A-PPAPDC1A MOBKL1A chr4 71768267 - PPAPDC1A chr10 122263330 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 19 20 Out-of-frame Inter-chr Tumor suppressor gene 67031 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MOBKL1B-GRIN2A MOBKL1B chr2 74405788 - GRIN2A chr16 9928087 - Exonic hg19 BRCA TCGA-BH-A5J0-01A 2 1 Out-of-frame Inter-chr Tumor suppressor gene p13.2 Tumor suppressor gene 67032 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MOBKL2A-PRDM13 MOBKL2A chr19 2076810 - PRDM13 chr6 100060909 + Exonic hg19 LGG TCGA-TM-A7CF-02A 2 1 Out-of-frame Inter-chr q16.2 Transcription factor 67033 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MOBKL2A-STK11 MOBKL2A chr19 2076810 - STK11 chr19 1218416 + Exonic hg19 HNSC TCGA-CN-A642-01A 27 8 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene 67034 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MOBKL2A-VCL MOBKL2A chr19 2096225 - VCL chr10 75877781 + Exonic hg19 LIHC TCGA-CC-A7IJ-01A 4 7 Out-of-frame Inter-chr q22.2 67035 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MOBKL2B-PTPRD MOBKL2B chr9 27359032 - PTPRD chr9 9766851 - Exonic hg19 LGG TCGA-HT-A5RC-01A 4 1 Out-of-frame Intra-chr Oncogene Tumor suppressor gene 67036 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MOBKL2B-SLC24A2 MOBKL2B chr9 27529553 - SLC24A2 chr9 19622297 - Exonic hg19 LGG TCGA-S9-A6UA-01A 3 3 Out-of-frame Intra-chr p22.1 67037 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MOCS1-LEMD3 MOCS1 chr6 39893422 - LEMD3 chr12 65632282 + Exonic hg19 OV TCGA-29-A5NZ-01A 3 9 Out-of-frame Inter-chr p21.2 q14.3 Seq+ 67038 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MON1A-C21orf67 MON1A chr3 49947552 - C21orf67 chr21 46355805 - Exonic hg19 PRAD TCGA-CH-5745-01A 4 1 CDS-3'UTR Inter-chr p21.31 67039 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MON1A-MBTD1 MON1A chr3 49967042 - MBTD1 chr17 49302570 - Exonic hg19 THYM TCGA-ZB-A96L-01A 3 2 CDS-5'UTR Inter-chr p21.31 q21.33 67040 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MON2-PIP4K2C MON2 chr12 62943610 - PIP4K2C chr12 57989671 + Exonic hg19 BRCA TCGA-E2-A9RU-01A 20 26 In-Frame Intra-chr q14.1 q13.3 Seq+ 67041 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MON2-USP15 MON2 chr12 62861098 - USP15 chr12 62783211 + Exonic hg19 LUAD TCGA-MP-A4TF-01A 4 2 In-Frame Intra-chr q14.1 q14.1 Seq+ 67042 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MORC2-PATZ1 MORC2 chr22 31363808 - PATZ1 chr22 31731849 - Exonic hg19 LUSC TCGA-L3-A524-01A 4 2 5'UTR-CDS Intra-chr q12.2 q12.2 Transcription factor Seq+ 67043 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MORC3-DOPEY2 MORC3 chr21 37717329 - DOPEY2 chr21 37642311 + Exonic hg19 BLCA TCGA-K4-A3WV-01A 37 17 In-Frame Intra-chr q22.12 q22.12 Seq+ 67044 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MORC3-FAM3B MORC3 chr21 37744829 - FAM3B chr21 42710305 + Exonic hg19 LUSC TCGA-37-3792-01A 13 2 Out-of-frame Intra-chr q22.12 q22.3 Seq+ 67045 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MORF4L2-GLRA4 MORF4L2 chrX 102933427 - GLRA4 chrX 102974199 - Exonic hg19 LUAD TCGA-44-7660-01A 116 115 5'UTR-CDS Intra-chr q22.2 q22.2 Seq+ 67046 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MORN1-CMPK1 MORN1 chr1 2316417 - CMPK1 chr1 47834141 + Exonic hg19 BRCA TCGA-E9-A1N9-01A 5 2 In-Frame Intra-chr p36.32 p33 Oncogene Seq+ 67047 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MOSC1-VPS33A MOSC1 chr1 220971356 - VPS33A chr12 122748746 - Exonic hg19 SARC TCGA-DX-A7EI-01A 11 9 Out-of-frame Inter-chr q24.31 67048 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MOSC2-C1orf143 MOSC2 chr1 220936392 - C1orf143 chr1 218698749 + Exonic hg19 LUAD TCGA-50-6591-01A 2 1 Out-of-frame Intra-chr q41 67049 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MOSPD2-ARHGAP6 MOSPD2 chrX 14891880 - ARHGAP6 chrX 11200238 - Exonic hg19 SARC TCGA-VT-A80J-01A 2 2 In-Frame Intra-chr p22.2 p22.2 Seq+ 67050 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MOV10-SYCP1 MOV10 chr1 113232720 - SYCP1 chr1 115438069 + Exonic hg19 READ TCGA-EI-6883-01A 4 1 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 67051 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MOV10-ZNHIT6 MOV10 chr1 113217671 - ZNHIT6 chr1 86146587 - Exonic hg19 PRAD TCGA-XJ-A9DQ-01A 10 5 In-Frame Intra-chr p13.2 p22.3 Seq+ 67052 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MOV10L1-NAV2 MOV10L1 chr22 50555780 - NAV2 chr11 20005671 + Exonic hg19 BRCA TCGA-C8-A27A-01A 3 4 In-Frame Inter-chr q13.33 p15.1 Seq+ 67053 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPDU1-C22orf13 MPDU1 chr17 7487283 - C22orf13 chr22 24944969 - Exonic hg19 BLCA TCGA-GV-A3JW-01A 22 16 In-Frame Inter-chr p13.1 67054 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPDU1-CTDNEP1 MPDU1 chr17 7487283 - CTDNEP1 chr17 7150662 - Exonic hg19 PRAD TCGA-KK-A8IA-01A 4 3 Out-of-frame Intra-chr p13.1 p13.1 67055 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPDU1-DNAH9 MPDU1 chr17 7487283 - DNAH9 chr17 11790142 + Exonic hg19 SARC TCGA-X6-A8C4-01A 27 18 Out-of-frame Intra-chr p13.1 p12 Seq+ 67056 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPDU1-GLP2R MPDU1 chr17 7487283 - GLP2R chr17 9737124 + Exonic hg19 PRAD TCGA-FC-7708-01A 3 5 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 67057 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPDU1-SPEM1 MPDU1 chr17 7487283 - SPEM1 chr17 7323946 + Exonic hg19 SARC TCGA-WK-A8XX-01A 18 12 Out-of-frame Intra-chr p13.1 Seq+ 67058 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPDZ-C9orf150 MPDZ chr9 13247634 - C9orf150 chr9 12821385 + Exonic hg19 BRCA TCGA-E2-A150-01A 43 43 Out-of-frame Intra-chr p23 67059 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPDZ-ITPK1 MPDZ chr9 13247634 - ITPK1 chr14 93408249 - Exonic hg19 UCEC TCGA-PG-A7D5-01A 14 15 Out-of-frame Inter-chr p23 Seq+ 67060 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPDZ-NFIB MPDZ chr9 13279399 - NFIB chr9 14150264 - Exonic hg19 BRCA TCGA-AN-A0AT-01A 8 4 5'UTR-CDS Intra-chr p23 p22.3 Transcription factor Seq+ 67061 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPDZ-PLIN2 MPDZ chr9 13188783 - PLIN2 chr9 19131269 - Exonic hg19 LGG TCGA-E1-A7Z2-01A 4 2 CDS-5'UTR Intra-chr p23 p22.1 67062 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPDZ-PLIN2 MPDZ chr9 13125215 - PLIN2 chr9 19131269 - Exonic hg19 BRCA TCGA-EW-A6S9-01A 2 3 CDS-5'UTR Intra-chr p23 p22.1 67063 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPG-SNRNP25 MPG chr16 133255 - SNRNP25 chr16 107086 + Exonic hg19 LUAD TCGA-97-A4M7-01A 84 46 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 67064 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPHOSPH6-PLXDC2 MPHOSPH6 chr16 82197687 - PLXDC2 chr10 20290704 + Exonic hg19 SKCM TCGA-EB-A42Z-01A 2 2 Out-of-frame Inter-chr q23.3 p12.31 67065 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPHOSPH9-C6orf89 MPHOSPH9 chr12 123678933 - C6orf89 chr6 36846784 + Exonic hg19 GBM TCGA-06-0129-01A 28 79 CDS-5'UTR Inter-chr q24.31 p21.2 67066 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPHOSPH9-CCDC92 MPHOSPH9 chr12 123682794 - CCDC92 chr12 124422377 - Exonic hg19 UCEC TCGA-PG-A914-01A 9 8 Out-of-frame Intra-chr q24.31 Seq+ 67067 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPND-CCDC94 MPND chr19 4358169 - CCDC94 chr19 4251024 + Exonic hg19 UCEC TCGA-AX-A2H4-01A 3 1 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 67068 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPND-RABEP1 MPND chr19 4343597 - RABEP1 chr17 5264503 + Exonic hg19 PRAD TCGA-HC-A9TH-01A 10 3 Out-of-frame Inter-chr p13.3 p13.2 Seq+ 67069 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPND-ZNF585A MPND chr19 4345978 - ZNF585A chr19 37656598 - Exonic hg19 LUAD TCGA-38-4628-01A 2 4 CDS-5'UTR Intra-chr p13.3 q13.12 Transcription factor Seq+ 67070 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPO-ANXA1 MPO chr17 56347217 - ANXA1 chr9 75772570 + Exonic hg19 LAML TCGA-AB-2994-03A 2 23 3'UTR-5'UTR Inter-chr q22 q21.13 Tumor suppressor gene 67071 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPO-FAR1 MPO chr17 56347217 - FAR1 chr11 13744912 + Exonic hg19 LAML TCGA-AB-2846-03A 2 7 3'UTR-CDS Inter-chr q22 p15.3 67072 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPO-STAT6 MPO chr17 56347217 - STAT6 chr12 57496773 - Exonic hg19 LAML TCGA-AB-2991-03A 2 6 3'UTR-3'UTR Inter-chr q22 q13.3 Transcription factor 67073 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPO-TYK2 MPO chr17 56347217 - TYK2 chr19 10491352 - Exonic hg19 LAML TCGA-AB-2857-03A 2 10 3'UTR-5'UTR Inter-chr q22 p13.2 TK:JakA 67074 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPP2-PPY MPP2 chr17 41975630 - PPY chr17 42019022 - Exonic hg19 BRCA TCGA-A7-A3J0-01A 6 4 CDS-5'UTR Intra-chr q21.31 q21.31 Seq+ 67075 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPP2-PPY MPP2 chr17 41975630 - PPY chr17 42019022 - Exonic hg19 BRCA TCGA-BH-A18V-06A 18 48 CDS-5'UTR Intra-chr q21.31 q21.31 Seq+ 67076 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPP5-CEP128 MPP5 chr14 67736500 - CEP128 chr14 81046767 - Exonic hg19 READ TCGA-AF-2690-01A 12 7 5'UTR-CDS Intra-chr q23.3 q31.1 Seq+ 67077 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPP5-FAM71D MPP5 chr14 67708250 - FAM71D chr14 67669811 + Exonic hg19 LIHC TCGA-ED-A7XO-01A 3 1 5'UTR-CDS Intra-chr q23.3 q23.3 KB Pub Seq+ 67078 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPP5-GPHN MPP5 chr14 67746254 - GPHN chr14 67635650 + Exonic hg19 LUAD TCGA-50-5946-01A 50 22 In-Frame Intra-chr q23.3 q23.3 Seq+ 67079 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPP5-GPHN MPP5 chr14 67746254 - GPHN chr14 67635650 + Exonic hg19 LUAD TCGA-50-5946-02A 3 2 In-Frame Intra-chr q23.3 q23.3 Seq+ 67080 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPP5-GPHN MPP5 chr14 67708250 - GPHN chr14 67610079 + Exonic hg19 BRCA TCGA-A2-A0YM-01A 27 23 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 67081 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPP5-GPHN MPP5 chr14 67708250 - GPHN chr14 67525366 + Exonic hg19 COAD TCGA-AU-6004-01A 28 26 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 67082 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPP5-GPHN MPP5 chr14 67770316 - GPHN chr14 67576857 + Exonic hg19 BLCA TCGA-BT-A20W-01A 2 1 In-Frame Intra-chr q23.3 q23.3 Seq+ 67083 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPP5-GPHN MPP5 chr14 67708250 - GPHN chr14 67346657 + Exonic hg19 READ TCGA-F5-6814-01A 4 7 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 67084 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPP5-GPHN MPP5 chr14 67779427 - GPHN chr14 67646295 + Exonic hg19 BLCA TCGA-FD-A3N6-01A 7 8 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 67085 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPP5-GPHN MPP5 chr14 67759436 - GPHN chr14 67646295 + Exonic hg19 LUAD TCGA-MP-A4SW-01A 3 2 In-Frame Intra-chr q23.3 q23.3 Seq+ 67086 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPP5-GPHN MPP5 chr14 67784196 - GPHN chr14 67555700 + Exonic hg19 ESCA TCGA-R6-A6Y0-01B 9 16 In-Frame Intra-chr q23.3 q23.3 Seq+ 67087 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPP5-GPHN MPP5 chr14 67736500 - GPHN chr14 67147825 + Exonic hg19 PRAD TCGA-YJ-A8SW-01A 2 1 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 67088 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPP5-RAD51B MPP5 chr14 67779427 - RAD51B chr14 69196525 + Exonic hg19 BRCA TCGA-A2-A0ES-01A 8 9 Out-of-frame Intra-chr q23.3 q24.1 Seq+ 67089 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPP5-RDH11 MPP5 chr14 67708250 - RDH11 chr14 68151921 - Exonic hg19 BRCA TCGA-E2-A1LL-01A 13 9 5'UTR-CDS Intra-chr q23.3 q24.1 Seq+ 67090 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPP6-OSBPL3 MPP6 chr7 24663403 - OSBPL3 chr7 24903218 - Exonic hg19 HNSC TCGA-CV-7248-01A 13 11 Out-of-frame Intra-chr p15.3 p15.3 Seq+ 67091 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPP7-RNF169 MPP7 chr10 28491082 - RNF169 chr11 74546591 + Exonic hg19 LUAD TCGA-44-A4SU-01A 2 2 In-Frame Inter-chr p12.1 q13.4 67092 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPPED1-SCFD2 MPPED1 chr22 43870841 - SCFD2 chr4 53740228 - Exonic hg19 UCS TCGA-NA-A4QY-01A 73 40 Out-of-frame Inter-chr q13.2 q12 Seq+ 67093 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPPED2-AMOTL1 MPPED2 chr11 30601793 - AMOTL1 chr11 94554696 + Exonic hg19 LGG TCGA-FG-5963-01A 8 12 In-Frame Intra-chr p14.1 q21 Seq+ 67094 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPPED2-AMOTL1 MPPED2 chr11 30601793 - AMOTL1 chr11 94554696 + Exonic hg19 LGG TCGA-FG-5963-02A 20 20 In-Frame Intra-chr p14.1 q21 Seq+ 67095 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPRIP-COPS3 MPRIP chr17 16981390 - COPS3 chr17 17150465 - Exonic hg19 KIRP TCGA-HE-A5NK-01A 25 13 In-Frame Intra-chr p11.2 p11.2 Seq+ 67096 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPRIP-HOXB13 MPRIP chr17 16981390 - HOXB13 chr17 46804405 - Exonic hg19 UCS TCGA-N8-A4PQ-01A 56 26 Out-of-frame Intra-chr p11.2 q21.32 Tumor suppressor gene Transcription factor Seq+ 67097 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPRIP-OAZ2 MPRIP chr17 16946285 - OAZ2 chr15 64982748 - Exonic hg19 SARC TCGA-FX-A3TO-01A 25 4 In-Frame Inter-chr p11.2 q22.31 Seq+ 67098 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPRIP-P4HA1 MPRIP chr17 16946285 - P4HA1 chr10 74790128 - Exonic hg19 SKCM TCGA-FW-A3TU-06A 3 7 Out-of-frame Inter-chr p11.2 q22.1 Seq+ 67099 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPRIP-TNFRSF13B MPRIP chr17 16946285 - TNFRSF13B chr17 16855897 - Exonic hg19 SARC TCGA-DX-A3M1-01A 36 27 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 67100 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPRIP-TOM1L2 MPRIP chr17 16946285 - TOM1L2 chr17 17766162 - Exonic hg19 BLCA TCGA-K4-A5RH-01A 49 68 Out-of-frame Intra-chr p11.2 p11.2 Tumor suppressor gene Seq+ 67101 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPRIP-TRAT1 MPRIP chr17 16981390 - TRAT1 chr3 108549517 + Exonic hg19 SKCM TCGA-D3-A3BZ-06A 13 9 Out-of-frame Inter-chr p11.2 q13.13 Seq+ 67102 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPV17L-XPO6 MPV17L chr16 15490064 - XPO6 chr16 28124371 - Exonic hg19 LGG TCGA-E1-5304-01A 2 4 Out-of-frame Intra-chr p13.11 p12.1 Seq+ 67103 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPZL1-PDE4DIP MPZL1 chr1 167691479 - PDE4DIP chr1 144946742 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 2 2 Out-of-frame Intra-chr q24.2 q21.2 Oncogene Seq+ 67104 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MPZL1-TNFSF4 MPZL1 chr1 167745403 - TNFSF4 chr1 173157708 - Exonic hg19 SARC TCGA-DX-A2J0-01A 84 41 In-Frame Intra-chr q24.2 q25.1 Seq+ 67105 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRC2-PHYHIPL MRC2 chr17 60705281 - PHYHIPL chr10 61004817 + Exonic hg19 PRAD TCGA-KK-A8IC-01A 9 6 Out-of-frame Inter-chr q23.2 q21.1 Seq+ 67106 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRC2-RND2 MRC2 chr17 60705281 - RND2 chr17 41177977 + Exonic hg19 GBM TCGA-27-2524-01A 2 55 Out-of-frame Intra-chr q23.2 q21.31 Seq+ 67107 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRC2-VMP1 MRC2 chr17 60751531 - VMP1 chr17 57917129 + Exonic hg19 LUSC TCGA-58-8386-01A 121 73 In-Frame Intra-chr q23.2 q23.1 Seq+ 67108 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRE11A-YAP1 MRE11A chr11 94163077 - YAP1 chr11 102033187 + Exonic hg19 LGG TCGA-DU-5855-01A 6 1 Out-of-frame Intra-chr Oncogene q22.1 Tumor suppressor gene 67109 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MREG-ARL4D MREG chr2 216861029 - ARL4D chr17 41477029 + Exonic hg19 LUSC TCGA-58-A46K-01A 6 4 CDS-5'UTR Inter-chr q35 q21.31 Seq+ 67110 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MREG-DNAH2 MREG chr2 216877956 - DNAH2 chr17 7735897 + Exonic hg19 SARC TCGA-DX-A8BM-01A 7 5 Out-of-frame Inter-chr q35 p13.1 Seq+ 67111 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MREG-SMARCAL1 MREG chr2 216861029 - SMARCAL1 chr2 217332667 + Exonic hg19 SARC TCGA-IS-A3K7-01A 3 1 Out-of-frame Intra-chr q35 q35 67112 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MREG-SPAG17 MREG chr2 216877956 - SPAG17 chr1 118496672 - Exonic hg19 SARC TCGA-IS-A3K7-01A 25 12 CDS-3'UTR Inter-chr q35 p12 Seq+ 67113 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL11-ST8SIA1 MRPL11 chr11 66204575 - ST8SIA1 chr12 22402032 - Exonic hg19 BRCA TCGA-B6-A0I2-01A 20 6 In-Frame Inter-chr q13.2 p12.1 Seq+ 67114 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL18-C6orf118 MRPL18 chr6 160212158 - C6orf118 chr6 165703556 - Exonic hg19 SARC TCGA-QC-A6FX-01A 15 7 Out-of-frame Intra-chr q25.3 q27 Seq+ 67115 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL21-FAM168A MRPL21 chr11 68660871 - FAM168A chr11 73118688 - Exonic hg19 LUSC TCGA-43-6771-01A 87 30 Out-of-frame Intra-chr q13.3 q13.4 Seq+ 67116 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL21-FAM168A MRPL21 chr11 68665395 - FAM168A chr11 73122581 - Exonic hg19 BRCA TCGA-A2-A3KC-01A 9 8 In-Frame Intra-chr q13.3 q13.4 Seq+ 67117 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL21-LRP5 MRPL21 chr11 68663983 - LRP5 chr11 68115315 + Exonic hg19 LUAD TCGA-91-6831-01A 3 3 Out-of-frame Intra-chr q13.3 q13.2 Seq+ 67118 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL21-MYO1B MRPL21 chr11 68668016 - MYO1B chr2 192265108 + Exonic hg19 BRCA TCGA-AC-A2BM-01A 33 8 Out-of-frame Inter-chr q13.3 q32.3 Seq+ 67119 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL21-SHANK2 MRPL21 chr11 68660358 - SHANK2 chr11 70319544 - Exonic hg19 HNSC TCGA-F7-7848-01A 125 74 Out-of-frame Intra-chr q13.3 q13.4 Seq+ 67120 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL21-SSH3 MRPL21 chr11 68663983 - SSH3 chr11 67074309 + Exonic hg19 BRCA TCGA-E2-A15O-01A 92 53 In-Frame Intra-chr q13.3 q13.2 Seq+ 67121 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL32-C7orf72 MRPL32 chr7 42972115 - C7orf72 chr7 50143910 + Exonic hg19 STAD TCGA-BR-7959-01A 3 8 In-Frame Intra-chr p14.1 p12.2 67122 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL33-RBKS MRPL33 chr2 27997397 - RBKS chr2 28004655 - Exonic hg19 LUAD TCGA-78-7149-01A 3 9 Out-of-frame Intra-chr p23.2 p23.2 Seq+ 67123 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL33-ZNF512 MRPL33 chr2 27995559 - ZNF512 chr2 27838035 + Exonic hg19 BRCA TCGA-C8-A12K-01A 5 4 Out-of-frame Intra-chr p23.2 p23.3 Transcription factor Seq+ 67124 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL35-CTNNA2 MRPL35 chr2 86434450 - CTNNA2 chr2 80772107 + Exonic hg19 LUSC TCGA-18-3414-01A 185 70 In-Frame Intra-chr p11.2 p12 Tumor suppressor gene Seq+ 67125 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL37-GPR172B MRPL37 chr1 54671083 - GPR172B chr17 4936464 - Exonic hg19 READ TCGA-AG-3731-01A 34 26 Out-of-frame Inter-chr p32.3 67126 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL37-MASP2 MRPL37 chr1 54666262 - MASP2 chr1 11090939 - Exonic hg19 STAD TCGA-BR-4357-01A 4 2 In-Frame Intra-chr p32.3 p36.22 67127 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL39-SLC35G6 MRPL39 chr21 26972111 - SLC35G6 chr17 7385307 + Exonic hg19 PRAD TCGA-KC-A7FD-01A 2 1 In-Frame Inter-chr q21.3 Seq+ 67128 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL40-TMCC3 MRPL40 chr22 19420871 - TMCC3 chr12 94976314 - Exonic hg19 PRAD TCGA-YL-A8HK-01A 8 4 Out-of-frame Inter-chr q11.21 q22 Seq+ 67129 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL42-POLR3B MRPL42 chr12 93881436 - POLR3B chr12 106903198 + Exonic hg19 BLCA TCGA-CF-A7I0-01A 23 5 In-Frame Intra-chr q22 q23.3 Seq+ 67130 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL42-ZMIZ1 MRPL42 chr12 93870793 - ZMIZ1 chr10 81036938 + Exonic hg19 PRAD TCGA-HC-8266-01A 2 1 Out-of-frame Inter-chr q22 q22.3 67131 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL44-ABCG1 MRPL44 chr2 224824719 - ABCG1 chr21 43645781 + Exonic hg19 PRAD TCGA-WW-A8ZI-01A 2 4 In-Frame Inter-chr q36.1 q22.3 67132 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL48-DTX4 MRPL48 chr11 73536841 - DTX4 chr11 58972149 + Exonic hg19 BRCA TCGA-A8-A07P-01A 4 2 In-Frame Intra-chr q13.4 q12.1 Seq+ 67133 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL48-DTX4 MRPL48 chr11 73536841 - DTX4 chr11 58972149 + Exonic hg19 BRCA TCGA-A8-A086-01A 4 4 In-Frame Intra-chr q13.4 q12.1 Seq+ 67134 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL48-DTX4 MRPL48 chr11 73536841 - DTX4 chr11 58972149 + Exonic hg19 BRCA TCGA-A8-A08J-01A 3 4 In-Frame Intra-chr q13.4 q12.1 Seq+ 67135 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL48-DTX4 MRPL48 chr11 73536841 - DTX4 chr11 58972149 + Exonic hg19 BRCA TCGA-A8-A092-01A 3 2 In-Frame Intra-chr q13.4 q12.1 Seq+ 67136 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL48-DTX4 MRPL48 chr11 73536841 - DTX4 chr11 58972149 + Exonic hg19 BRCA TCGA-A8-A093-01A 26 29 In-Frame Intra-chr q13.4 q12.1 Seq+ 67137 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL48-GDPD5 MRPL48 chr11 73519395 - GDPD5 chr11 75155540 - Exonic hg19 LUSC TCGA-37-4135-01A 28 17 Out-of-frame Intra-chr q13.4 q13.5 Seq+ 67138 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL48-NARS2 MRPL48 chr11 73536841 - NARS2 chr11 78239982 - Exonic hg19 SKCM TCGA-YG-AA3P-06A 5 5 In-Frame Intra-chr q13.4 q14.1 Seq+ 67139 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL49-ARL2 MRPL49 chr11 64889896 - ARL2 chr11 64787891 + Exonic hg19 LUAD TCGA-49-AARQ-01A 30 28 In-Frame Intra-chr q13.1 q13.1 Seq+ 67140 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL50-C9orf125 MRPL50 chr9 104160783 - C9orf125 chr9 104251482 - Exonic hg19 UCEC TCGA-EY-A54A-01A 21 13 Out-of-frame Intra-chr q31.1 67141 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPL50-ERP44 MRPL50 chr9 104160783 - ERP44 chr9 102822454 - Exonic hg19 GBM TCGA-06-0744-01A 174 405 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 67142 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPS18A-C16orf5 MRPS18A chr6 43655405 - C16orf5 chr16 4564665 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 63 17 CDS-5'UTR Inter-chr p21.1 67143 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPS18C-ENOPH1 MRPS18C chr4 84378111 - ENOPH1 chr4 83369073 + Exonic hg19 OV TCGA-13-1511-01A 6 5 In-Frame Intra-chr q21.23 q21.22 Seq+ 67144 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPS22-SLC9A9 MRPS22 chr3 139071634 - SLC9A9 chr3 143412149 - Exonic hg19 LUAD TCGA-67-3774-01A 6 9 In-Frame Intra-chr q23 q24 Seq+ 67145 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPS23-CUEDC1 MRPS23 chr17 55927328 - CUEDC1 chr17 55945604 - Exonic hg19 BRCA TCGA-AN-A0XU-01A 19 20 Out-of-frame Intra-chr q22 q22 Seq+ 67146 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPS23-FAM117A MRPS23 chr17 55926601 - FAM117A chr17 47810082 - Exonic hg19 SARC TCGA-SI-A71O-01A 18 24 Out-of-frame Intra-chr q22 q21.33 Seq+ 67147 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPS23-FAM117A MRPS23 chr17 55926601 - FAM117A chr17 47810082 - Exonic hg19 SARC TCGA-SI-A71O-06A 12 5 Out-of-frame Intra-chr q22 q21.33 Seq+ 67148 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPS23-TRIM37 MRPS23 chr17 55926601 - TRIM37 chr17 57076820 - Exonic hg19 BLCA TCGA-BL-A0C8-01A 17 8 Out-of-frame Intra-chr q22 q22 Seq+ 67149 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPS23-VEZF1 MRPS23 chr17 55926601 - VEZF1 chr17 56052261 - Exonic hg19 BRCA TCGA-BH-A0BZ-01A 36 53 Out-of-frame Intra-chr q22 q22 Transcription factor Seq+ 67150 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPS27-HIST1H2BN MRPS27 chr5 71609908 - HIST1H2BN chr6 27809342 + Exonic hg19 PRAD TCGA-EJ-5516-01A 12 14 CDS-3'UTR Inter-chr q13.2 p22.1 Seq+ 67151 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPS28-HIST1H2AC MRPS28 chr8 80915234 - HIST1H2AC chr6 26138282 + Exonic hg19 BRCA TCGA-C8-A134-01A 54 13 CDS-3'UTR Inter-chr q21.13 p22.2 Seq+ 67152 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPS35-LYRM5 MRPS35 chr12 27869391 - LYRM5 chr12 25356854 + Exonic hg19 STAD TCGA-IP-7968-01A 9 56 CDS-5'UTR Intra-chr p11.22 Seq+ 67153 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPS35-PPFIBP1 MRPS35 chr12 27877119 - PPFIBP1 chr12 27829361 + Exonic hg19 BRCA TCGA-BH-A18T-01A 5 6 In-Frame Intra-chr p11.22 p11.23 Seq+ 67154 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPS35-ST6GALNAC5 MRPS35 chr12 27877119 - ST6GALNAC5 chr1 77509889 + Exonic hg19 PCPG TCGA-QR-A6H4-01A 3 1 In-Frame Inter-chr p11.22 p31.1 Seq+ 67155 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPS5-NEB MRPS5 chr2 95766582 - NEB chr2 152554162 - Exonic hg19 PRAD TCGA-CH-5788-01A 2 3 Out-of-frame Intra-chr q11.1 q23.3 67156 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRPS7-GGA3 MRPS7 chr17 73259588 - GGA3 chr17 73242877 - Exonic hg19 LUAD TCGA-91-8499-01A 4 5 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 67157 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRRF-KIAA0368 MRRF chr9 125054119 - KIAA0368 chr9 114206774 - Exonic hg19 LUSC TCGA-66-2754-01A 2 3 Out-of-frame Intra-chr q33.2 q31.3 67158 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRRF-NR4A1 MRRF chr9 125027217 - NR4A1 chr12 52448111 + Exonic hg19 SARC TCGA-DX-A8BV-01A 2 2 5'UTR-5'UTR Inter-chr q33.2 q13.13 Tumor suppressor gene Transcription factor Seq+ 67159 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRRF-TTLL11 MRRF chr9 125054119 - TTLL11 chr9 124633027 - Exonic hg19 COAD TCGA-DM-A28A-01A 5 6 In-Frame Intra-chr q33.2 q33.2 Seq+ 67160 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRS2-C6orf62 MRS2 chr6 24423278 - C6orf62 chr6 24709139 - Exonic hg19 SKCM TCGA-EE-A2GP-06A 42 30 In-Frame Intra-chr p22.3 p22.3 Seq+ 67161 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRS2-DCDC2 MRS2 chr6 24405469 - DCDC2 chr6 24205330 - Exonic hg19 BLCA TCGA-DK-A6B1-01A 26 6 Out-of-frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 67162 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MRS2-FAM65B MRS2 chr6 24403464 - FAM65B chr6 24876045 - Exonic hg19 BRCA TCGA-E2-A1II-01A 38 21 CDS-5'UTR Intra-chr p22.3 Seq+ 67163 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MS4A7-ATG2A MS4A7 chr11 60150761 - ATG2A chr11 64681972 - Exonic hg19 BRCA TCGA-EW-A1IW-01A 23 35 In-Frame Intra-chr q12.2 q13.1 Seq+ 67164 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSH2-AC018682.6 MSH2 chr2 47635694 - AC018682.6 chr2 46711383 + Exonic hg19 BRCA TCGA-BH-A18L-01A 2 6 Out-of-frame Intra-chr p21 Oncogene Tumor suppressor gene 67165 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSH2-CCDC57 MSH2 chr2 47637511 - CCDC57 chr17 80121233 - Exonic hg19 CESC TCGA-ZJ-AB0I-01A 7 6 Out-of-frame Inter-chr p21 Oncogene Tumor suppressor gene q25.3 Seq+ 67166 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSH2-EPCAM MSH2 chr2 47643568 - EPCAM chr2 47612305 + Exonic hg19 STAD TCGA-CD-8533-01A 10 43 Out-of-frame Intra-chr p21 Oncogene Tumor suppressor gene p21 Seq+ 67167 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSH2-EPCAM MSH2 chr2 47630541 - EPCAM chr2 47612305 + Exonic hg19 ESCA TCGA-L5-A8NI-01A 21 157 Out-of-frame Intra-chr p21 Oncogene Tumor suppressor gene p21 Seq+ 67168 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSH2-SLC3A1 MSH2 chr2 47637511 - SLC3A1 chr2 44539725 + Exonic hg19 BRCA TCGA-A2-A04U-01A 19 12 In-Frame Intra-chr p21 Oncogene Tumor suppressor gene p21 Seq+ 67169 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSH2-SLCO6A1 MSH2 chr2 47672796 - SLCO6A1 chr5 101709198 - Exonic hg19 PCPG TCGA-WB-A81D-01A 13 9 Out-of-frame Inter-chr p21 Oncogene Tumor suppressor gene q21.1 Seq+ 67170 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSH2-SPTLC1 MSH2 chr2 47672796 - SPTLC1 chr9 94800647 - Exonic hg19 UCS TCGA-N8-A4PM-01A 9 5 Out-of-frame Inter-chr p21 Oncogene Tumor suppressor gene q22.31 Seq+ 67171 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSH2-TTC7A MSH2 chr2 47641557 - TTC7A chr2 47233061 + Exonic hg19 BRCA TCGA-A7-A26G-01A 38 46 In-Frame Intra-chr p21 Oncogene Tumor suppressor gene p21 Seq+ 67172 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSH2-TTC7A MSH2 chr2 47630541 - TTC7A chr2 47177502 + Exonic hg19 PRAD TCGA-KK-A5A1-01A 2 1 In-Frame Intra-chr p21 Oncogene Tumor suppressor gene p21 Seq+ 67173 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSH3-RASGEF1C MSH3 chr5 79952350 - RASGEF1C chr5 179555610 - Exonic hg19 LGG TCGA-HT-A614-01A 4 2 Out-of-frame Intra-chr q14.1 q35.3 Seq+ 67174 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSH4-RABGGTB MSH4 chr1 76288266 - RABGGTB chr1 76260898 + Exonic hg19 BRCA TCGA-AC-A3QQ-01A 2 2 Out-of-frame Intra-chr p31.1 p31.1 67175 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSH5-BSCL2 MSH5 chr6 31726954 - BSCL2 chr11 62460269 - Exonic hg19 ACC TCGA-OR-A5K5-01A 6 4 In-Frame Inter-chr q12.3 Seq+ 67176 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSI1-KRT78 MSI1 chr12 120783938 - KRT78 chr12 53242405 - Exonic hg19 SARC TCGA-FX-A3RE-01A 12 3 Out-of-frame Intra-chr q24.31 q13.13 67177 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSI2-AKAP1 MSI2 chr17 55607085 - AKAP1 chr17 55182802 + Exonic hg19 LUSC TCGA-60-2695-01A 5 3 CDS-5'UTR Intra-chr q22 q22 Seq+ 67178 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSI2-BCAS3 MSI2 chr17 55729522 - BCAS3 chr17 58885365 + Exonic hg19 BLCA TCGA-2F-A9KR-01A 11 14 In-Frame Intra-chr q22 q23.2 Seq+ 67179 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSI2-BRD7 MSI2 chr17 55607085 - BRD7 chr16 50355949 - Exonic hg19 BLCA TCGA-DK-AA76-01A 4 1 Out-of-frame Inter-chr q22 q12.1 Tumor suppressor gene 67180 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSI2-C18orf34 MSI2 chr17 55339553 - C18orf34 chr18 30977172 - Exonic hg19 PRAD TCGA-EJ-5507-01A 7 5 Out-of-frame Inter-chr q22 67181 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSI2-CA10 MSI2 chr17 55339553 - CA10 chr17 50008492 - Exonic hg19 BRCA TCGA-D8-A27N-01A 4 4 Out-of-frame Intra-chr q22 q22 Seq+ 67182 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSI2-CA10 MSI2 chr17 55607085 - CA10 chr17 50149753 - Exonic hg19 ACC TCGA-OR-A5JP-01A 12 7 In-Frame Intra-chr q22 q22 Seq+ 67183 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSI2-CISD3 MSI2 chr17 55478832 - CISD3 chr17 36887013 + Exonic hg19 UCS TCGA-N8-A4PL-01A 129 85 In-Frame Intra-chr q22 Seq+ 67184 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSI2-DHX40 MSI2 chr17 55478832 - DHX40 chr17 57643988 + Exonic hg19 BRCA TCGA-EW-A6SD-01A 6 11 Out-of-frame Intra-chr q22 q23.1 Seq+ 67185 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSI2-EFCAB5 MSI2 chr17 55607085 - EFCAB5 chr17 28378136 + Exonic hg19 BRCA TCGA-C8-A275-01A 40 31 Out-of-frame Intra-chr q22 q11.2 Seq+ 67186 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSI2-HNF1B MSI2 chr17 55478832 - HNF1B chr17 36070671 - Exonic hg19 COAD TCGA-NH-A50U-01A 3 3 Out-of-frame Intra-chr q22 q12 Transcription factor 67187 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSI2-ICAM2 MSI2 chr17 55704664 - ICAM2 chr17 62081324 - Exonic hg19 LUSC TCGA-66-2783-01A 255 186 In-Frame Intra-chr q22 q23.3 Seq+ 67188 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSI2-PCTP MSI2 chr17 55339553 - PCTP chr17 53844696 + Exonic hg19 BRCA TCGA-D8-A27F-01A 149 87 In-Frame Intra-chr q22 q22 Seq+ 67189 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSI2-RAD51C MSI2 chr17 55339553 - RAD51C chr17 56772292 + Exonic hg19 BRCA TCGA-AN-A0FD-01A 13 4 Out-of-frame Intra-chr q22 q22 Tumor suppressor gene Seq+ 67190 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSI2-SLC39A11 MSI2 chr17 55339553 - SLC39A11 chr17 71027853 - Exonic hg19 BRCA TCGA-AN-A0FW-01A 94 81 In-Frame Intra-chr q22 q25.1 Seq+ 67191 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSI2-SMYD3 MSI2 chr17 55607085 - SMYD3 chr1 246518396 - Exonic hg19 PRAD TCGA-TP-A8TT-01A 5 2 Out-of-frame Inter-chr q22 q44 Transcription factor Seq+ 67192 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSI2-SYNPO2 MSI2 chr17 55478832 - SYNPO2 chr4 119944585 + Exonic hg19 LUSC TCGA-L3-A524-01A 14 7 In-Frame Inter-chr q22 q26 Tumor suppressor gene Seq+ 67193 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSI2-TEX2 MSI2 chr17 55607085 - TEX2 chr17 62272455 - Exonic hg19 BRCA TCGA-D8-A27N-01A 34 22 Out-of-frame Intra-chr q22 q23.3 Seq+ 67194 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSI2-TEX2 MSI2 chr17 55339553 - TEX2 chr17 62291602 - Exonic hg19 BRCA TCGA-E9-A228-01A 33 23 CDS-5'UTR Intra-chr q22 q23.3 Seq+ 67195 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSI2-TOB1 MSI2 chr17 55704664 - TOB1 chr17 48944963 - Exonic hg19 BRCA TCGA-LD-A9QF-01A 14 6 CDS-5'UTR Intra-chr q22 q21.33 Seq+ 67196 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSI2-UTP18 MSI2 chr17 55478832 - UTP18 chr17 49374326 + Exonic hg19 HNSC TCGA-BB-4227-01A 13 19 Out-of-frame Intra-chr q22 q21.33 Seq+ 67197 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSI2-WIPF2 MSI2 chr17 55478832 - WIPF2 chr17 38412643 + Exonic hg19 BRCA TCGA-E2-A15H-01A 7 8 CDS-5'UTR Intra-chr q22 q21.2 Seq+ 67198 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSI2-YPEL2 MSI2 chr17 55339553 - YPEL2 chr17 57430576 + Exonic hg19 BLCA TCGA-4Z-AA87-01A 4 7 CDS-5'UTR Intra-chr q22 q22 Seq+ 67199 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSI2-YPEL2 MSI2 chr17 55607085 - YPEL2 chr17 57430576 + Exonic hg19 BRCA TCGA-C8-A275-01A 4 7 CDS-5'UTR Intra-chr q22 q22 Seq+ 67200 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSL1-SHANK2 MSL1 chr17 38279633 - SHANK2 chr11 70742672 - Exonic hg19 LUSC TCGA-60-2715-01A 27 16 Out-of-frame Inter-chr q21.1 q13.4 Seq+ 67201 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSL2-CEP70 MSL2 chr3 135913814 - CEP70 chr3 138256189 - Exonic hg19 LIHC TCGA-EP-A2KA-01A 3 1 Out-of-frame Intra-chr q22.3 q22.3 67202 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSL2-OPRM1 MSL2 chr3 135913814 - OPRM1 chr6 154410961 + Exonic hg19 LUSC TCGA-63-A5MT-01A 7 4 Out-of-frame Inter-chr q22.3 q25.2 Seq+ 67203 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSL2-PPP2R3A MSL2 chr3 135913814 - PPP2R3A chr3 135863885 + Exonic hg19 BRCA TCGA-A8-A08P-01A 5 18 Out-of-frame Intra-chr q22.3 q22.2 Seq+ 67204 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSL2-STAG1 MSL2 chr3 135913814 - STAG1 chr3 136068205 - Exonic hg19 OV TCGA-13-1511-01A 8 7 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 67205 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSL2-STAG1 MSL2 chr3 135913814 - STAG1 chr3 136349823 - Exonic hg19 BLCA TCGA-4Z-AA7R-01A 3 5 CDS-5'UTR Intra-chr q22.3 q22.3 Seq+ 67206 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSL2-STAG1 MSL2 chr3 135913814 - STAG1 chr3 136349823 - Exonic hg19 BRCA TCGA-AC-A2BK-01A 35 7 CDS-5'UTR Intra-chr q22.3 q22.3 Seq+ 67207 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSLN-CLCN3 MSLN chr16 818865 - CLCN3 chr4 170623929 + Exonic hg19 PAAD TCGA-US-A77E-01A 2 3 Out-of-frame Inter-chr p13.3 q33 67208 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSLN-UVRAG MSLN chr16 818865 - UVRAG chr11 75694431 + Exonic hg19 MESO TCGA-LK-A4NZ-01A 2 4 3'UTR-CDS Inter-chr p13.3 q13.5 Tumor suppressor gene 67209 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSMB-ANXA1 MSMB chr10 51562511 - ANXA1 chr9 75772570 + Exonic hg19 PRAD TCGA-HC-8260-01A 2 126 Out-of-frame Inter-chr q11.22 Tumor suppressor gene q21.13 Tumor suppressor gene 67210 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSMB-KLK3 MSMB chr10 51562517 - KLK3 chr19 51361285 + Exonic hg19 PRAD TCGA-J4-A67O-01A 3 3 3'UTR-CDS Inter-chr q11.22 Tumor suppressor gene q13.33 67211 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSMB-KLK3 MSMB chr10 51562517 - KLK3 chr19 51361285 + Exonic hg19 PRAD TCGA-J9-A52B-01A 3 6 3'UTR-CDS Inter-chr q11.22 Tumor suppressor gene q13.33 67212 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSMB-SUPT16H MSMB chr10 51562517 - SUPT16H chr14 21829491 - Exonic hg19 PRAD TCGA-HC-8262-01A 2 291 Out-of-frame Inter-chr q11.22 Tumor suppressor gene q11.2 67213 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSN-HTR3D MSN chrX 64887720 - HTR3D chr3 183755809 + Exonic hg19 LUSC TCGA-56-5898-01A 13 1 In-Frame Inter-chr q12 q27.1 Seq+ 67214 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSN-NLRC4 MSN chrX 64887720 - NLRC4 chr2 32461408 - Exonic hg19 BRCA TCGA-JL-A3YW-01A 15 14 Out-of-frame Inter-chr q12 p22.3 Seq+ 67215 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSRA-AGPAT5 MSRA chr8 10177499 - AGPAT5 chr8 6612572 + Exonic hg19 PRAD TCGA-HC-7080-01A 2 2 Out-of-frame Intra-chr p23.1 p23.1 Seq+ 67216 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSRA-CSGALNACT1 MSRA chr8 10177499 - CSGALNACT1 chr8 19266205 - Exonic hg19 SKCM TCGA-EB-A3XF-01A 13 8 In-Frame Intra-chr p23.1 p21.3 Seq+ 67217 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSRA-DEFB135 MSRA chr8 10177499 - DEFB135 chr8 11841930 + Exonic hg19 BRCA TCGA-AO-A03V-01A 2 1 Out-of-frame Intra-chr p23.1 p23.1 67218 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSRA-ESCO2 MSRA chr8 9912168 - ESCO2 chr8 27657058 + Exonic hg19 PRAD TCGA-CH-5741-01A 3 1 Out-of-frame Intra-chr p23.1 p21.1 67219 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSRA-SPAG11B MSRA chr8 9912168 - SPAG11B chr8 7320381 - Exonic hg19 SARC TCGA-DX-A1KZ-01A 5 4 In-Frame Intra-chr p23.1 p23.1 Seq+ 67220 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSRB2-C10orf112 MSRB2 chr10 23399247 - C10orf112 chr10 19981211 + Exonic hg19 BRCA TCGA-GM-A2DC-01A 5 8 Out-of-frame Intra-chr p12.2 Seq+ 67221 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSRB3-ACTR5 MSRB3 chr12 65762806 - ACTR5 chr20 37400202 + Exonic hg19 SARC TCGA-DX-A3U6-01A 9 7 Out-of-frame Inter-chr q14.3 q11.23 Seq+ 67222 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSRB3-BCL2L14 MSRB3 chr12 65672645 - BCL2L14 chr12 12204730 + Exonic hg19 LUSC TCGA-85-6175-01A 2 1 Out-of-frame Intra-chr q14.3 67223 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSRB3-CNOT2 MSRB3 chr12 65672645 - CNOT2 chr12 70729218 + Exonic hg19 SARC TCGA-DX-AB2H-01A 1007 657 In-Frame Intra-chr q14.3 q15 Seq+ 67224 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MSRB3-JAZF1 MSRB3 chr12 65722383 - JAZF1 chr7 27880486 - Exonic hg19 LGG TCGA-DU-A5TY-01A 57 35 Out-of-frame Inter-chr q14.3 p15.1 Transcription factor Seq+ 67225 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MST1-SRRD MST1 chr3 49721747 - SRRD chr22 26883995 + Exonic hg19 BRCA TCGA-A2-A0D2-01A 3 7 Out-of-frame Inter-chr p21.31 STE:STE20 Tumor suppressor gene q12.1 67226 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MST1R-FNDC3B MST1R chr3 49932600 - FNDC3B chr3 171904502 + Exonic hg19 LUAD TCGA-95-7039-01A 47 21 Out-of-frame Intra-chr p21.31 Tumor suppressor gene q26.31 Seq+ 67227 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTA1-PACS2 MTA1 chr14 105929888 - PACS2 chr14 105843105 + Exonic hg19 LUSC TCGA-34-5240-01A 2 3 Out-of-frame Intra-chr q32.33 q32.33 Seq+ 67228 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTA1-PACS2 MTA1 chr14 105886400 - PACS2 chr14 105814830 + Exonic hg19 BRCA TCGA-B6-A0IJ-01A 4 12 Out-of-frame Intra-chr q32.33 q32.33 Seq+ 67229 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTA1-PACS2 MTA1 chr14 105886400 - PACS2 chr14 105860891 + Exonic hg19 HNSC TCGA-DQ-7589-01A 4 2 In-Frame Intra-chr q32.33 q32.33 Seq+ 67230 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTA2-CDHR5 MTA2 chr11 62362736 - CDHR5 chr11 618111 - Exonic hg19 BRCA TCGA-E2-A9RU-01A 11 4 In-Frame Intra-chr q12.3 Seq+ 67231 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTA2-MS4A18 MTA2 chr11 62368895 - MS4A18 chr11 60504451 + Exonic hg19 LGG TCGA-E1-5302-01A 4 1 Out-of-frame Intra-chr q12.3 67232 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTA2-UBXN1 MTA2 chr11 62364788 - UBXN1 chr11 62446424 - Exonic hg19 CESC TCGA-VS-A952-01A 20 8 CDS-5'UTR Intra-chr q12.3 q12.3 Seq+ 67233 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTA3-GEMIN6 MTA3 chr2 42836724 - GEMIN6 chr2 39006114 + Exonic hg19 LGG TCGA-HT-A618-01A 3 1 CDS-5'UTR Intra-chr p21 p22.1 67234 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTAP-CDKN2A MTAP chr9 21815518 - CDKN2A chr9 21968241 - Exonic hg19 MESO TCGA-3H-AB3M-01A 25 66 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.3 Oncogene Tumor suppressor gene Seq+ 67235 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTAP-CDKN2A MTAP chr9 21818201 - CDKN2A chr9 21971207 - Exonic hg19 BRCA TCGA-A2-A04Q-01A 4 6 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.3 Oncogene Tumor suppressor gene Seq+ 67236 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTAP-EEF1A2 MTAP chr9 21802780 - EEF1A2 chr20 62127388 - Exonic hg19 LUSC TCGA-63-A5MM-01A 16 8 In-Frame Inter-chr p21.3 Tumor suppressor gene q13.33 Seq+ 67237 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTAP-EXOC6B MTAP chr9 21854869 - EXOC6B chr2 72606999 - Exonic hg19 LUAD TCGA-97-8176-01A 7 2 In-Frame Inter-chr p21.3 Tumor suppressor gene p13.2 67238 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTAP-LINGO2 MTAP chr9 21838009 - LINGO2 chr9 27950704 - Exonic hg19 BLCA TCGA-FJ-A871-01A 3 1 CDS-5'UTR Intra-chr p21.3 Tumor suppressor gene p21.1 Seq+ 67239 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTAP-LINGO2 MTAP chr9 21854869 - LINGO2 chr9 28476023 - Exonic hg19 MESO TCGA-LK-A4O5-01A 13 4 CDS-5'UTR Intra-chr p21.3 Tumor suppressor gene p21.1 Seq+ 67240 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTAP-POC1B MTAP chr9 21802780 - POC1B chr12 89885892 - Exonic hg19 LUAD TCGA-86-7954-01A 5 10 Out-of-frame Inter-chr p21.3 Tumor suppressor gene q21.33 Seq+ 67241 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTAP-PTPRD MTAP chr9 21838009 - PTPRD chr9 9766851 - Exonic hg19 PAAD TCGA-US-A779-01A 7 15 CDS-5'UTR Intra-chr p21.3 Tumor suppressor gene Oncogene Tumor suppressor gene Seq+ 67242 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTBP-PQLC2 MTBP chr8 121458753 - PQLC2 chr1 19651989 + Exonic hg19 BRCA TCGA-D8-A1XZ-01A 5 1 Out-of-frame Inter-chr q24.12 p36.13 Seq+ 67243 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTBP-UBXN2A MTBP chr8 121502810 - UBXN2A chr2 24222542 + Exonic hg19 BRCA TCGA-BH-A0H7-01A 2 1 Out-of-frame Inter-chr q24.12 p23.3 67244 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTCH2-FHIT MTCH2 chr11 47660251 - FHIT chr3 59738047 - Exonic hg19 OV TCGA-23-2077-01A 5 36 In-Frame Inter-chr p11.2 p14.2 Tumor suppressor gene Seq+ 67245 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTCH2-FNBP4 MTCH2 chr11 47660251 - FNBP4 chr11 47741638 - Exonic hg19 BRCA TCGA-A2-A25D-01A 17 16 In-Frame Intra-chr p11.2 p11.2 Seq+ 67246 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTDH-KIAA0146 MTDH chr8 98731417 - KIAA0146 chr8 48586363 + Exonic hg19 BRCA TCGA-A8-A08T-01A 8 5 Out-of-frame Intra-chr q22.1 67247 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTDH-SNX31 MTDH chr8 98657115 - SNX31 chr8 101648239 - Exonic hg19 BRCA TCGA-AO-A1KR-01A 3 3 In-Frame Intra-chr q22.1 q22.3 Seq+ 67248 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTERF-PHTF2 MTERF chr7 91509369 - PHTF2 chr7 77522925 + Exonic hg19 HNSC TCGA-CQ-5326-01A 2 2 Out-of-frame Intra-chr q11.23 67249 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTERFD1-C18orf34 MTERFD1 chr8 97263134 - C18orf34 chr18 30554645 - Exonic hg19 LGG TCGA-DU-6397-01A 2 5 Out-of-frame Inter-chr 67250 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTERFD1-HSD17B6 MTERFD1 chr8 97263134 - HSD17B6 chr12 57167618 + Exonic hg19 SARC TCGA-3B-A9HO-01A 8 13 CDS-5'UTR Inter-chr q13.3 67251 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTERFD3-CRY1 MTERFD3 chr12 107378893 - CRY1 chr12 107415970 - Exonic hg19 UCEC TCGA-PG-A914-01A 17 13 5'UTR-CDS Intra-chr q23.3 Seq+ 67252 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTF1-SERINC2 MTF1 chr1 38322923 - SERINC2 chr1 31905814 + Exonic hg19 KIRC TCGA-B8-5164-01A 10 11 Out-of-frame Intra-chr p34.3 Transcription factor p35.2 Seq+ 67253 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTF1-SF3A3 MTF1 chr1 38322923 - SF3A3 chr1 38453508 - Exonic hg19 GBM TCGA-06-0141-01A 4 19 In-Frame Intra-chr p34.3 Transcription factor p34.3 Seq+ 67254 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTF1-SF3A3 MTF1 chr1 38322923 - SF3A3 chr1 38435407 - Exonic hg19 BRCA TCGA-AR-A0TT-01A 46 21 In-Frame Intra-chr p34.3 Transcription factor p34.3 Seq+ 67255 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTF2-BRDT MTF2 chr1 93545088 - BRDT chr1 92469971 + Exonic hg19 BRCA TCGA-A7-A26G-01A 3 12 Out-of-frame Intra-chr p22.1 Transcription factor p22.1 Atypical:BRD Seq+ 67256 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTF2-CTNND2 MTF2 chr1 93545088 - CTNND2 chr5 11199773 - Exonic hg19 LUSC TCGA-46-3765-01A 21 10 Out-of-frame Inter-chr p22.1 Transcription factor p15.2 Seq+ 67257 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTF2-GPSM2 MTF2 chr1 93545088 - GPSM2 chr1 109427897 + Exonic hg19 BRCA TCGA-A8-A08I-01A 18 6 5'UTR-5'UTR Intra-chr p22.1 Transcription factor p13.3 Seq+ 67258 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTF2-RPL5 MTF2 chr1 93581175 - RPL5 chr1 93306108 + Exonic hg19 BRCA TCGA-A7-A13D-01A 22 38 Out-of-frame Intra-chr p22.1 Transcription factor p22.1 Tumor suppressor gene Seq+ 67259 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTFR1-LIG1 MTFR1 chr8 66605994 - LIG1 chr19 48647220 - Exonic hg19 SARC TCGA-X6-A8C2-01A 16 6 In-Frame Inter-chr q13.1 q13.33 Tumor suppressor gene Seq+ 67260 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTG1-ZNF511 MTG1 chr10 135216277 - ZNF511 chr10 135126292 + Exonic hg19 BRCA TCGA-C8-A137-01A 50 25 In-Frame Intra-chr q26.3 q26.3 Transcription factor Seq+ 67261 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTHFD1-PAPLN MTHFD1 chr14 64855186 - PAPLN chr14 73711352 + Exonic hg19 BLCA TCGA-XF-AAMW-01A 28 7 Out-of-frame Intra-chr q23.3 q24.2 Seq+ 67262 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTHFD1L-IFT81 MTHFD1L chr6 151198962 - IFT81 chr12 110600724 + Exonic hg19 SARC TCGA-DX-A1L4-01A 21 16 In-Frame Inter-chr q25.1 q24.11 Seq+ 67263 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTHFD1L-PLEKHG1 MTHFD1L chr6 151358253 - PLEKHG1 chr6 150971864 + Exonic hg19 BRCA TCGA-E9-A248-01A 12 11 CDS-5'UTR Intra-chr q25.1 q25.1 67264 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTHFD1L-RGS17 MTHFD1L chr6 151209117 - RGS17 chr6 153365178 - Exonic hg19 BRCA TCGA-A2-A0CY-01A 17 25 CDS-5'UTR Intra-chr q25.1 q25.2 Seq+ 67265 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTHFD1L-RNF216 MTHFD1L chr6 151293194 - RNF216 chr7 5760803 - Exonic hg19 HNSC TCGA-CV-7236-01A 10 4 In-Frame Inter-chr q25.1 p22.1 Seq+ 67266 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTHFD1L-THEMIS MTHFD1L chr6 151355736 - THEMIS chr6 128040968 - Exonic hg19 BRCA TCGA-D8-A13Z-01A 6 8 In-Frame Intra-chr q25.1 Seq+ 67267 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTHFS-ACAN MTHFS chr15 80181435 - ACAN chr15 89414613 + Exonic hg19 STAD TCGA-IN-8462-01A 2 17 In-Frame Intra-chr q25.1 q26.1 Seq+ 67268 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTHFS-BCL2A1 MTHFS chr15 80181435 - BCL2A1 chr15 80253516 - Exonic hg19 KIRC TCGA-B0-4700-01A 6 3 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 67269 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTHFS-BCL2A1 MTHFS chr15 80181435 - BCL2A1 chr15 80253516 - Exonic hg19 LIHC TCGA-DD-A73G-01A 35 69 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 67270 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTHFS-BCL2A1 MTHFS chr15 80181435 - BCL2A1 chr15 80253516 - Exonic hg19 LIHC TCGA-DD-AAD6-01A 20 27 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 67271 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTIF2-PPP3R1 MTIF2 chr2 55489452 - PPP3R1 chr2 68415822 - Exonic hg19 LIHC TCGA-CC-A3MB-01A 7 8 In-Frame Intra-chr p16.1 p14 Seq+ 67272 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTL5-HIPK3 MTL5 chr11 68480738 - HIPK3 chr11 33373154 + Exonic hg19 BRCA TCGA-E9-A1N5-01A 8 1 Out-of-frame Intra-chr p13 CMGC:DYRK Seq+ 67273 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTL5-PPFIA1 MTL5 chr11 68506168 - PPFIA1 chr11 70208201 + Exonic hg19 BRCA TCGA-EW-A1J5-01A 28 17 In-Frame Intra-chr q13.3 Seq+ 67274 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTL5-SART1 MTL5 chr11 68506168 - SART1 chr11 65746071 + Exonic hg19 BRCA TCGA-GM-A2D9-01A 3 4 Out-of-frame Intra-chr q13.1 Seq+ 67275 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTM1-VBP1 MTM1 chrX 149787612 - VBP1 chrX 154448460 + Exonic hg19 LUAD TCGA-55-6712-01A 24 2 In-Frame Intra-chr q28 q28 Seq+ 67276 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTMR1-FATE1 MTMR1 chrX 149887172 - FATE1 chrX 150889867 + Exonic hg19 BRCA TCGA-A8-A08G-01A 7 1 Out-of-frame Intra-chr q28 q28 Seq+ 67277 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTMR1-HS1BP3 MTMR1 chrX 149924337 - HS1BP3 chr2 20840940 - Exonic hg19 BRCA TCGA-OL-A5D7-01A 44 23 In-Frame Inter-chr q28 p24.1 Seq+ 67278 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTMR12-C5orf42 MTMR12 chr5 32248108 - C5orf42 chr5 37213834 - Exonic hg19 LUSC TCGA-66-2793-01A 2 1 In-Frame Intra-chr p13.3 p13.2 67279 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTMR12-MAEL MTMR12 chr5 32312864 - MAEL chr1 166961923 + Exonic hg19 SARC TCGA-X6-A8C2-01A 36 13 Out-of-frame Inter-chr p13.3 q24.1 Seq+ 67280 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTMR12-SPEF2 MTMR12 chr5 32268807 - SPEF2 chr5 35628562 + Exonic hg19 LIHC TCGA-CC-5264-01A 24 23 In-Frame Intra-chr p13.3 p13.2 Seq+ 67281 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTMR12-SPEF2 MTMR12 chr5 32312864 - SPEF2 chr5 35727777 + Exonic hg19 COAD TCGA-DM-A1D8-01A 3 2 Out-of-frame Intra-chr p13.3 p13.2 Seq+ 67282 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTMR12-TERT MTMR12 chr5 32263219 - TERT chr5 1294781 - Exonic hg19 THCA TCGA-BJ-A4O9-01A 8 5 Out-of-frame Intra-chr p13.3 p15.33 Oncogene Seq+ 67283 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTMR12-ZFR MTMR12 chr5 32312864 - ZFR chr5 32364381 - Exonic hg19 LUAD TCGA-44-7670-01A 37 5 In-Frame Intra-chr p13.3 p13.3 Seq+ 67284 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTMR12-ZFR MTMR12 chr5 32255799 - ZFR chr5 32356045 - Exonic hg19 LUAD TCGA-64-1680-01A 4 1 In-Frame Intra-chr p13.3 p13.3 Seq+ 67285 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTMR2-MAML2 MTMR2 chr11 95657039 - MAML2 chr11 95724887 - Exonic hg19 BRCA TCGA-BH-A18V-01A 11 3 Out-of-frame Intra-chr q21 q21 Oncogene Seq+ 67286 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTMR2-MAML2 MTMR2 chr11 95598765 - MAML2 chr11 95724887 - Exonic hg19 BRCA TCGA-E9-A244-01A 11 6 Out-of-frame Intra-chr q21 q21 Oncogene Seq+ 67287 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTMR2-MAML2 MTMR2 chr11 95621320 - MAML2 chr11 95826681 - Exonic hg19 LGG TCGA-HT-7477-01B 22 3 In-Frame Intra-chr q21 q21 Oncogene Seq+ 67288 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTMR2-TCP11L1 MTMR2 chr11 95647406 - TCP11L1 chr11 33094020 + Exonic hg19 PRAD TCGA-ZG-A9L0-01A 16 5 5'UTR-CDS Intra-chr q21 p13 Seq+ 67289 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTMR3-CABP7 MTMR3 chr22 30353077 - CABP7 chr22 30123651 + Exonic hg19 LIHC TCGA-WJ-A86L-01A 11 11 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 67290 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTMR3-CCDC130 MTMR3 chr22 30279348 - CCDC130 chr19 13842989 + Exonic hg19 UCEC TCGA-PG-A915-01A 5 1 Out-of-frame Inter-chr q12.2 p13.13 67291 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTMR3-CLIP2 MTMR3 chr22 30279348 - CLIP2 chr7 73811404 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 23 40 5'UTR-CDS Inter-chr q12.2 q11.23 Seq+ 67292 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTMR3-EMID1 MTMR3 chr22 30279348 - EMID1 chr22 29610915 + Exonic hg19 SKCM TCGA-D3-A8GJ-06A 10 17 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 67293 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTMR3-MB MTMR3 chr22 30279348 - MB chr22 36033255 - Exonic hg19 SKCM TCGA-ER-A197-06A 9 26 Out-of-frame Intra-chr q12.2 q12.3 Seq+ 67294 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTMR3-RNF215 MTMR3 chr22 30353077 - RNF215 chr22 30776390 - Exonic hg19 LUSC TCGA-43-5668-01A 13 6 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 67295 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTMR3-SCNN1B MTMR3 chr22 30367051 - SCNN1B chr16 23359913 + Exonic hg19 LUAD TCGA-62-A46U-01A 13 6 CDS-5'UTR Inter-chr q12.2 p12.2 Seq+ 67296 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTMR3-TSHZ2 MTMR3 chr22 30279348 - TSHZ2 chr20 52103683 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 14 18 5'UTR-3'UTR Inter-chr q12.2 q13.2 Transcription factor Seq+ 67297 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTMR3-ZNRF3 MTMR3 chr22 30279348 - ZNRF3 chr22 29383064 + Exonic hg19 LIHC TCGA-DD-A118-01A 2 1 5'UTR-5'UTR Intra-chr q12.2 q12.1 Seq+ 67298 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTMR4-INSR MTMR4 chr17 56581105 - INSR chr19 7267907 - Exonic hg19 BRCA TCGA-EW-A1J1-01A 2 1 Out-of-frame Inter-chr q22 p13.2 TK:InsR 67299 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTMR6-DDX21 MTMR6 chr13 25821372 - DDX21 chr10 70723858 + Exonic hg19 COAD TCGA-A6-6648-01A 2 2 Out-of-frame Inter-chr q12.13 q22.1 67300 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTOR-CAMTA1 MTOR chr1 11313896 - CAMTA1 chr1 6880241 + Exonic hg19 GBM TCGA-32-5222-01A 30 76 In-Frame Intra-chr p36.22 Oncogene p36.31 Tumor suppressor gene Transcription factor Seq+ 67301 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTOR-CR1L MTOR chr1 11288725 - CR1L chr1 207857217 + Exonic hg19 LGG TCGA-HT-A5RA-01A 18 14 Out-of-frame Intra-chr p36.22 Oncogene q32.2 Seq+ 67302 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTOR-GARNL3 MTOR chr1 11217209 - GARNL3 chr9 130151183 + Exonic hg19 UCEC TCGA-EY-A210-01A 14 9 Out-of-frame Inter-chr p36.22 Oncogene q33.3 Seq+ 67303 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTOR-MAD2L2 MTOR chr1 11227499 - MAD2L2 chr1 11740670 - Exonic hg19 UCS TCGA-NA-A4QX-01A 45 31 CDS-5'UTR Intra-chr p36.22 Oncogene p36.22 Seq+ 67304 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTR-IFI16 MTR chr1 237001899 - IFI16 chr1 159021469 + Exonic hg19 BRCA TCGA-A8-A07O-01A 6 3 In-Frame Intra-chr q43 Oncogene q23.1 Tumor suppressor gene Seq+ 67305 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTRR-FASTKD3 MTRR chr5 7897360 - FASTKD3 chr5 7866096 - Exonic hg19 SKCM TCGA-EB-A44R-06A 83 41 Out-of-frame Intra-chr p15.31 Oncogene p15.31 Seq+ 67306 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTRR-NMD3 MTRR chr5 7897360 - NMD3 chr3 160965046 + Exonic hg19 LUSC TCGA-66-2753-01A 29 12 In-Frame Inter-chr p15.31 Oncogene q26.1 Seq+ 67307 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTRR-SLC30A5 MTRR chr5 7878435 - SLC30A5 chr5 68413066 + Exonic hg19 PRAD TCGA-HC-8260-01A 2 2 In-Frame Intra-chr p15.31 Oncogene q13.1 Seq+ 67308 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTSS1-DDX27 MTSS1 chr8 125563031 - DDX27 chr20 47849303 + Exonic hg19 KIRC TCGA-A3-3374-01A 2 5 Out-of-frame Inter-chr q24.13 Tumor suppressor gene q13.13 67309 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTSS1-ERBB2 MTSS1 chr8 125740125 - ERBB2 chr17 37863243 + Exonic hg19 BLCA TCGA-DK-A2I6-01A 13 10 Out-of-frame Inter-chr q24.13 Tumor suppressor gene q12 Oncogene Seq+ 67310 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTSS1-FAM164A MTSS1 chr8 125575023 - FAM164A chr8 79588022 + Exonic hg19 BRCA TCGA-AR-A0TV-01A 11 7 Out-of-frame Intra-chr q24.13 Tumor suppressor gene 67311 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTSS1-KIAA0196 MTSS1 chr8 125597328 - KIAA0196 chr8 126040949 - Exonic hg19 LIHC TCGA-QA-A7B7-01A 473 212 Out-of-frame Intra-chr q24.13 Tumor suppressor gene Seq+ 67312 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTSS1-ST3GAL1 MTSS1 chr8 125740125 - ST3GAL1 chr8 134478333 - Exonic hg19 BRCA TCGA-BH-A0B7-01A 50 34 In-Frame Intra-chr q24.13 Tumor suppressor gene q24.22 Seq+ 67313 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTSS1-WHSC1L1 MTSS1 chr8 125711767 - WHSC1L1 chr8 38205733 - Exonic hg19 SKCM TCGA-GF-A769-01A 41 45 CDS-5'UTR Intra-chr q24.13 Tumor suppressor gene p11.23 Tumor suppressor gene Seq+ 67314 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTSS1L-VAC14 MTSS1L chr16 70708209 - VAC14 chr16 70732714 - Exonic hg19 LUSC TCGA-66-2758-01A 6 2 Out-of-frame Intra-chr q22.1 q22.2 Seq+ 67315 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTUS1-ASAH1 MTUS1 chr8 17601113 - ASAH1 chr8 17920739 - Exonic hg19 STAD TCGA-HU-A4GF-01A 6 50 In-Frame Intra-chr p22 Tumor suppressor gene p22 Seq+ 67316 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTUS1-FGL1 MTUS1 chr8 17570723 - FGL1 chr8 17726513 - Exonic hg19 LUAD TCGA-55-8094-01A 96 79 In-Frame Intra-chr p22 Tumor suppressor gene p22 Seq+ 67317 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTUS1-FGL1 MTUS1 chr8 17570723 - FGL1 chr8 17743080 - Exonic hg19 LUAD TCGA-55-8508-01A 17 4 CDS-5'UTR Intra-chr p22 Tumor suppressor gene p22 Seq+ 67318 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MTUS2-SIRT7 MTUS2 chr13 30054501 - SIRT7 chr17 79875843 - Exonic hg19 SARC TCGA-DX-A8BK-01A 2 5 In-Frame Inter-chr q12.3 q25.3 Seq+ 67319 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MUC1-FAM189B MUC1 chr1 155161974 - FAM189B chr1 155220955 - Exonic hg19 UCEC TCGA-A5-A3LP-01A 9 2 In-Frame Intra-chr q22 Oncogene Seq+ 67320 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MUC1-GBA MUC1 chr1 155162577 - GBA chr1 155210508 - Exonic hg19 UCEC TCGA-BK-A139-02A 115 70 Out-of-frame Intra-chr q22 Oncogene Seq+ 67321 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MUC1-PKLR MUC1 chr1 155161974 - PKLR chr1 155263381 - Exonic hg19 LUAD TCGA-91-A4BD-01A 3 3 In-Frame Intra-chr q22 Oncogene q22 Seq+ 67322 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MUC1-SIAE MUC1 chr1 155158302 - SIAE chr11 124543777 - Exonic hg19 LUAD TCGA-44-6776-01A 2 36 3'UTR-5'UTR Inter-chr q22 Oncogene q24.2 67323 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MUC13-SIAE MUC13 chr3 124624289 - SIAE chr11 124543777 - Exonic hg19 STAD TCGA-BR-8687-01A 2 11 3'UTR-5'UTR Inter-chr q21.2 q24.2 67324 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MUC2-CLCN3 MUC2 chr11 1104419 - CLCN3 chr4 170623929 + Exonic hg19 PAAD TCGA-US-A776-01A 2 149 Out-of-frame Inter-chr q33 67325 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MUC4-PCYT1A MUC4 chr3 195538607 - PCYT1A chr3 195941244 - Exonic hg19 PAAD TCGA-IB-AAUQ-01A 6 3 CDS-3'UTR Intra-chr q29 Seq+ 67326 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MUC4-TNK2 MUC4 chr3 195495893 - TNK2 chr3 195610180 - Exonic hg19 CESC TCGA-C5-A8XK-01A 8 16 Out-of-frame Intra-chr q29 Oncogene Seq+ 67327 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MUC5B-ZNFX1 MUC5B chr11 1283402 - ZNFX1 chr20 47863418 - Exonic hg19 LUAD TCGA-55-6543-01A 2 33 Out-of-frame Inter-chr p15.5 q13.13 67328 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MUCL1-CHI3L2 MUCL1 chr12 55252171 - CHI3L2 chr1 111772314 + Exonic hg19 BRCA TCGA-D8-A1JK-01A 2 746 Out-of-frame Inter-chr q13.2 p13.2 67329 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MUT-SUPT3H MUT chr6 49430816 - SUPT3H chr6 44988369 - Exonic hg19 LUAD TCGA-05-4420-01A 17 12 5'UTR-CDS Intra-chr p12.3 p21.1 Seq+ 67330 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MVK-CPM MVK chr12 110023930 - CPM chr12 69250459 - Exonic hg19 SARC TCGA-DX-AB36-01A 133 79 Out-of-frame Intra-chr q24.11 q15 Seq+ 67331 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MVP-KIF22 MVP chr16 29851780 - KIF22 chr16 29814770 + Exonic hg19 BRCA TCGA-A7-A3J0-01A 29 25 In-Frame Intra-chr p11.2 p11.2 Seq+ 67332 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MVP-KIF22 MVP chr16 29851780 - KIF22 chr16 29814770 + Exonic hg19 BRCA TCGA-BH-A18V-01A 40 27 In-Frame Intra-chr p11.2 p11.2 Seq+ 67333 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MVP-KIF22 MVP chr16 29851780 - KIF22 chr16 29814770 + Exonic hg19 BRCA TCGA-BH-A18V-06A 152 147 In-Frame Intra-chr p11.2 p11.2 Seq+ 67334 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MVP-ZNF267 MVP chr16 29842394 - ZNF267 chr16 31925797 + Exonic hg19 HNSC TCGA-CR-6474-01A 39 27 Out-of-frame Intra-chr p11.2 p11.2 Transcription factor Seq+ 67335 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MXD1-ANTXR1 MXD1 chr2 70148897 - ANTXR1 chr2 69267176 + Exonic hg19 OV TCGA-24-2023-01A 2 1 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 67336 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MXI1-ADD3 MXI1 chr10 111988079 - ADD3 chr10 111878345 + Exonic hg19 LUSC TCGA-77-8153-01A 4 4 Out-of-frame Intra-chr q25.2 Tumor suppressor gene Transcription factor q25.1 Seq+ 67337 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MXI1-C10orf57 MXI1 chr10 111967840 - C10orf57 chr10 81841597 + Exonic hg19 COAD TCGA-CA-5254-01A 33 20 Out-of-frame Intra-chr q25.2 Tumor suppressor gene Transcription factor Seq+ 67338 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MXI1-KLK3 MXI1 chr10 112046264 - KLK3 chr19 51358171 + Exonic hg19 PRAD TCGA-HC-7742-01A 2 1 3'UTR-5'UTR Inter-chr q25.2 Tumor suppressor gene Transcription factor q13.33 67339 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MXRA8-CDK11A MXRA8 chr1 1293836 - CDK11A chr1 1654270 - Exonic hg19 LUSC TCGA-43-5670-01A 12 28 CDS-5'UTR Intra-chr p36.33 p36.33 Seq+ 67340 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MXRA8-DDX27 MXRA8 chr1 1288072 - DDX27 chr20 47849303 + Exonic hg19 BLCA TCGA-FD-A3SL-01A 2 4 Out-of-frame Inter-chr p36.33 q13.13 67341 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MXRA8-SUPT16H MXRA8 chr1 1288072 - SUPT16H chr14 21829491 - Exonic hg19 SARC TCGA-IE-A3OV-01A 2 8 Out-of-frame Inter-chr p36.33 q11.2 67342 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYB-NFIB MYB chr6 135521553 - NFIB chr9 14307519 - Exonic hg19 BRCA TCGA-A1-A0SB-01A 74 54 In-Frame Inter-chr q23.3 Oncogene Transcription factor p22.3 Transcription factor KB Pub Seq+ 67343 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYBBP1A-FGF11 MYBBP1A chr17 4451253 - FGF11 chr17 7344790 + Exonic hg19 LUSC TCGA-85-A4CN-01A 2 1 Out-of-frame Intra-chr p13.2 Tumor suppressor gene 67344 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYBL2-IFT52 MYBL2 chr20 42320959 - IFT52 chr20 42249497 + Exonic hg19 LIHC TCGA-CC-A3MC-01A 3 4 In-Frame Intra-chr q13.12 Transcription factor q13.12 Seq+ 67345 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYBPC1-NPY MYBPC1 chr12 102025497 - NPY chr7 24323807 + Exonic hg19 PRAD TCGA-HC-7752-01A 2 3 CDS-5'UTR Inter-chr q23.2 p15.3 67346 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYBPC1-PXN MYBPC1 chr12 102057338 - PXN chr12 120662180 - Exonic hg19 LGG TCGA-E1-5303-01A 3 3 In-Frame Intra-chr q23.2 q24.23 Seq+ 67347 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYCBP2-CPB2 MYCBP2 chr13 77862296 - CPB2 chr13 46638876 - Exonic hg19 BLCA TCGA-UY-A78N-01A 17 18 In-Frame Intra-chr q22.3 q14.13 Seq+ 67348 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYCBP2-PIBF1 MYCBP2 chr13 77730193 - PIBF1 chr13 73572960 + Exonic hg19 LGG TCGA-QH-A6X9-01A 24 4 In-Frame Intra-chr q22.3 q21.33 Seq+ 67349 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYCBP2-RNF219 MYCBP2 chr13 77807291 - RNF219 chr13 79219132 - Exonic hg19 BRCA TCGA-E2-A14P-01A 4 1 Out-of-frame Intra-chr q22.3 q31.1 Seq+ 67350 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYCBP2-TAF6L MYCBP2 chr13 77900609 - TAF6L chr11 62549585 + Exonic hg19 PRAD TCGA-ZG-A9LZ-01A 3 2 Out-of-frame Inter-chr q22.3 q12.3 Seq+ 67351 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYEOV-FAM38A MYEOV chr11 69062043 - FAM38A chr16 88815887 - Exonic hg19 STAD TCGA-CD-8525-01A 2 3 Out-of-frame Inter-chr q13.3 67352 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH10-CCDC42 MYH10 chr17 8404144 - CCDC42 chr17 8638572 - Exonic hg19 UCEC TCGA-AX-A3G3-01A 4 2 In-Frame Intra-chr p13.1 p13.1 Seq+ 67353 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH10-CDKN2A MYH10 chr17 8526220 - CDKN2A chr9 21971207 - Exonic hg19 SARC TCGA-SI-A71P-01A 72 231 In-Frame Inter-chr p13.1 p21.3 Oncogene Tumor suppressor gene Seq+ 67354 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH10-OLFM4 MYH10 chr17 8533972 - OLFM4 chr13 53608483 + Exonic hg19 SARC TCGA-X6-A8C5-01A 8 6 5'UTR-CDS Inter-chr p13.1 q14.3 Tumor suppressor gene Seq+ 67355 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH10-TEKT3 MYH10 chr17 8492399 - TEKT3 chr17 15217547 - Exonic hg19 SARC TCGA-HB-A2OT-01A 48 32 In-Frame Intra-chr p13.1 p12 Seq+ 67356 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH11-TYK2 MYH11 chr16 15796992 - TYK2 chr19 10491352 - Exonic hg19 PRAD TCGA-VP-A879-01A 2 10 3'UTR-5'UTR Inter-chr Oncogene p13.2 TK:JakA 67357 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH11-ZNF827 MYH11 chr16 15796992 - ZNF827 chr4 146859787 - Exonic hg19 PRAD TCGA-YL-A8SB-01A 2 1 3'UTR-5'UTR Inter-chr Oncogene q31.22 Transcription factor 67358 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH14-FBLN2 MYH14 chr19 50805126 - FBLN2 chr3 13649562 + Exonic hg19 UCS TCGA-N8-A4PO-01A 9 4 Out-of-frame Inter-chr q13.33 p25.1 67359 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH14-GPR19 MYH14 chr19 50714027 - GPR19 chr12 12848445 - Exonic hg19 ESCA TCGA-L5-A4OQ-01A 2 19 CDS-5'UTR Inter-chr q13.33 p13.1 Seq+ 67360 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH14-SIGLEC16 MYH14 chr19 50721028 - SIGLEC16 chr19 50476300 + Exonic hg19 SKCM TCGA-D3-A3CC-06A 15 9 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 67361 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH3-CYP3A5 MYH3 chr17 10532914 - CYP3A5 chr7 99264688 - Exonic hg19 PRAD TCGA-KK-A8IA-01A 2 3 In-Frame Inter-chr p13.1 q22.1 67362 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH9-ANKS1A MYH9 chr22 36677327 - ANKS1A chr6 34977682 + Exonic hg19 BRCA TCGA-E2-A1B0-01A 2 31 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene p21.31 67363 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH9-BIRC6 MYH9 chr22 36677327 - BIRC6 chr2 32820101 + Exonic hg19 THCA TCGA-ET-A25G-01A 2 2 3'UTR-CDS Inter-chr q12.3 Oncogene Tumor suppressor gene p22.3 67364 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH9-CACNA1C MYH9 chr22 36783852 - CACNA1C chr12 2224390 + Exonic hg19 LAML TCGA-AB-2943-03A 2 6 5'UTR-CDS Inter-chr q12.3 Oncogene Tumor suppressor gene p13.33 67365 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH9-CD74 MYH9 chr22 36685235 - CD74 chr5 149792314 - Exonic hg19 KIRC TCGA-A3-A6NL-01A 2 1 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene q33.1 67366 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH9-DDX21 MYH9 chr22 36677327 - DDX21 chr10 70723858 + Exonic hg19 PRAD TCGA-G9-6371-01A 2 1 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene q22.1 67367 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH9-DNASE1 MYH9 chr22 36697580 - DNASE1 chr16 3704962 + Exonic hg19 KICH TCGA-KM-8438-01A 2 1 CDS-5'UTR Inter-chr q12.3 Oncogene Tumor suppressor gene p13.3 67368 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH9-EIF3D MYH9 chr22 36737415 - EIF3D chr22 36907833 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 35 28 Out-of-frame Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 KB Pub Seq+ 67369 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH9-FOXRED2 MYH9 chr22 36783852 - FOXRED2 chr22 36886314 - Exonic hg19 BRCA TCGA-A7-A4SE-01A 101 75 5'UTR-CDS Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Seq+ 67370 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH9-FOXRED2 MYH9 chr22 36737415 - FOXRED2 chr22 36889850 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 147 95 In-Frame Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Seq+ 67371 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH9-HSP90AA1 MYH9 chr22 36783852 - HSP90AA1 chr14 102550901 - Exonic hg19 UCEC TCGA-D1-A3DG-01A 28 36 5'UTR-CDS Inter-chr q12.3 Oncogene Tumor suppressor gene q32.31 Oncogene Seq+ 67372 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH9-KLK3 MYH9 chr22 36685235 - KLK3 chr19 51358191 + Exonic hg19 PRAD TCGA-V1-A8WN-01A 2 1 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene q13.33 67373 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH9-NDUFV1 MYH9 chr22 36677327 - NDUFV1 chr11 67375697 + Exonic hg19 CESC TCGA-C5-A1MK-01A 2 18 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene q13.2 67374 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH9-NFYC MYH9 chr22 36783852 - NFYC chr1 41204508 + Exonic hg19 BRCA TCGA-B6-A0IJ-01A 197 201 5'UTR-5'UTR Inter-chr q12.3 Oncogene Tumor suppressor gene p34.2 Transcription factor Seq+ 67375 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH9-ORAOV1 MYH9 chr22 36744949 - ORAOV1 chr11 69488089 - Exonic hg19 LUAD TCGA-64-1678-01A 57 28 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene q13.3 Seq+ 67376 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH9-PLA2G6 MYH9 chr22 36783852 - PLA2G6 chr22 38565478 - Exonic hg19 BRCA TCGA-A2-A04U-01A 8 9 5'UTR-5'UTR Intra-chr q12.3 Oncogene Tumor suppressor gene q13.1 Seq+ 67377 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH9-PLAT MYH9 chr22 36677327 - PLAT chr8 42051245 - Exonic hg19 COAD TCGA-F4-6805-01A 2 10 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene p11.21 67378 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH9-PVALB MYH9 chr22 36783852 - PVALB chr22 37213056 - Exonic hg19 OV TCGA-20-1684-01A 7 12 5'UTR-5'UTR Intra-chr q12.3 Oncogene Tumor suppressor gene Seq+ 67379 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH9-TXN2 MYH9 chr22 36783852 - TXN2 chr22 36876884 - Exonic hg19 OV TCGA-23-1107-01A 2 57 5'UTR-5'UTR Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Seq+ 67380 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH9-TXN2 MYH9 chr22 36718474 - TXN2 chr22 36876884 - Exonic hg19 LUAD TCGA-55-8299-01A 7 9 CDS-5'UTR Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Seq+ 67381 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH9-TXN2 MYH9 chr22 36783852 - TXN2 chr22 36876884 - Exonic hg19 BRCA TCGA-A7-A4SE-01A 280 19 5'UTR-5'UTR Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Seq+ 67382 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH9-TXN2 MYH9 chr22 36783852 - TXN2 chr22 36863964 - Exonic hg19 LIHC TCGA-BC-A10R-01A 61 67 5'UTR-CDS Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Seq+ 67383 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH9-TXN2 MYH9 chr22 36783852 - TXN2 chr22 36863964 - Exonic hg19 HNSC TCGA-CN-A49A-01A 9 6 5'UTR-CDS Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Seq+ 67384 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH9-TXN2 MYH9 chr22 36705327 - TXN2 chr22 36863964 - Exonic hg19 UCEC TCGA-EY-A2ON-01A 2 4 Out-of-frame Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Seq+ 67385 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYH9-TXN2 MYH9 chr22 36744949 - TXN2 chr22 36863964 - Exonic hg19 CESC TCGA-JW-A5VJ-01A 24 21 In-Frame Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Seq+ 67386 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYL12A-C18orf42 MYL12A chr18 3254048 - C18orf42 chr18 5145754 - Exonic hg19 SARC TCGA-DX-AB2P-01A 40 66 In-Frame Intra-chr p11.31 67387 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYL6-ABI3BP MYL6 chr12 56555359 - ABI3BP chr3 100557308 - Exonic hg19 SARC TCGA-DX-A3U9-01A 2 3 Out-of-frame Inter-chr q13.2 q12.2 67388 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYL6-SF3B2 MYL6 chr12 56555359 - SF3B2 chr11 65836145 + Exonic hg19 BRCA TCGA-A8-A08G-01A 2 4 3'UTR-CDS Inter-chr q13.2 q13.1 67389 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYL6-SMARCC2 MYL6 chr12 56556115 - SMARCC2 chr12 56561978 - Exonic hg19 UCEC TCGA-EY-A3QX-01A 4 2 3'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 67390 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYL6-STAT6 MYL6 chr12 56555358 - STAT6 chr12 57496773 - Exonic hg19 STAD TCGA-BR-8687-01A 2 11 Out-of-frame Intra-chr q13.2 q13.3 Transcription factor 67391 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYL6-SUPT16H MYL6 chr12 56555358 - SUPT16H chr14 21829491 - Exonic hg19 HNSC TCGA-D6-A6EN-01A 2 9 Out-of-frame Inter-chr q13.2 q11.2 67392 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYL6-ZNFX1 MYL6 chr12 56555358 - ZNFX1 chr20 47863418 - Exonic hg19 HNSC TCGA-BA-5559-01A 2 5 Out-of-frame Inter-chr q13.2 q13.13 67393 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYL6-ZNFX1 MYL6 chr12 56555359 - ZNFX1 chr20 47863418 - Exonic hg19 BLCA TCGA-FD-A3SM-01A 2 7 Out-of-frame Inter-chr q13.2 q13.13 67394 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYL6B-VWA3A MYL6B chr12 56547876 - VWA3A chr16 22161108 + Exonic hg19 GBM TCGA-06-0156-01A 19 10 Out-of-frame Inter-chr q13.2 Seq+ 67395 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYLIP-OR5V1 MYLIP chr6 16130978 - OR5V1 chr6 29324054 - Exonic hg19 ACC TCGA-OR-A5JP-01A 57 16 CDS-5'UTR Intra-chr p22.3 Seq+ 67396 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYLK-NXPH1 MYLK chr3 123367818 - NXPH1 chr7 8790638 + Exonic hg19 KIRC TCGA-BP-4781-01A 8 3 Out-of-frame Inter-chr q21.1 p21.3 Seq+ 67397 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYLK-PARP1 MYLK chr3 123331145 - PARP1 chr1 224102800 - Exonic hg19 SARC TCGA-HB-A3L4-01A 2 141 Out-of-frame Inter-chr q21.1 q42.12 Oncogene Tumor suppressor gene 67398 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYLK-PLXND1 MYLK chr3 123345665 - PLXND1 chr3 129297276 - Exonic hg19 LIHC TCGA-FV-A496-01A 11 5 In-Frame Intra-chr q21.1 q22.1 Seq+ 67399 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYLK-SIAE MYLK chr3 123331145 - SIAE chr11 124543777 - Exonic hg19 KIRC TCGA-BP-4968-01A 2 2 3'UTR-5'UTR Inter-chr q21.1 q24.2 67400 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYLK-USP48 MYLK chr3 123512524 - USP48 chr1 22016592 - Exonic hg19 SARC TCGA-WP-A9GB-01A 4 3 In-Frame Inter-chr q21.1 p36.12 Seq+ 67401 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYLK-VAMP4 MYLK chr3 123512524 - VAMP4 chr1 171679954 - Exonic hg19 SARC TCGA-DX-A6BG-01A 7 5 Out-of-frame Inter-chr q21.1 q24.3 Seq+ 67402 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYNN-NLGN1 MYNN chr3 169492349 - NLGN1 chr3 173525470 + Exonic hg19 LUSC TCGA-56-7730-01A 2 2 Out-of-frame Intra-chr q26.2 Transcription factor q26.31 Seq+ 67403 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO10-C5orf38 MYO10 chr5 16877718 - C5orf38 chr5 2755143 + Exonic hg19 SKCM TCGA-D3-A2JC-06A 484 209 Out-of-frame Intra-chr p15.1 p15.33 Seq+ 67404 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO10-DNAH5 MYO10 chr5 16877718 - DNAH5 chr5 13931353 - Exonic hg19 LUAD TCGA-05-4396-01A 5 2 In-Frame Intra-chr p15.1 p15.2 Seq+ 67405 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO10-FAM186A MYO10 chr5 16818118 - FAM186A chr12 50750031 - Exonic hg19 SKCM TCGA-EB-A44Q-06A 32 22 Out-of-frame Inter-chr p15.1 q13.12 Seq+ 67406 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO10-NPR3 MYO10 chr5 16877718 - NPR3 chr5 32724804 + Exonic hg19 BRCA TCGA-AR-A0TU-01A 2 6 Out-of-frame Intra-chr p15.1 p13.3 Seq+ 67407 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO10-PFDN2 MYO10 chr5 16711017 - PFDN2 chr1 161072165 - Exonic hg19 BLCA TCGA-XF-AAMZ-01A 98 50 In-Frame Inter-chr p15.1 q23.3 Seq+ 67408 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO10-SLC12A7 MYO10 chr5 16794755 - SLC12A7 chr5 1094363 - Exonic hg19 SKCM TCGA-FS-A1ZG-06A 77 22 Out-of-frame Intra-chr p15.1 p15.33 Seq+ 67409 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO10-ST6GALNAC3 MYO10 chr5 16935897 - ST6GALNAC3 chr1 76779490 + Exonic hg19 LUAD TCGA-05-4424-01A 5 4 In-Frame Inter-chr p15.1 p31.1 Seq+ 67410 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO15A-TOP3A MYO15A chr17 18077235 - TOP3A chr17 18178294 - Exonic hg19 BRCA TCGA-PE-A5DC-01A 2 6 Out-of-frame Intra-chr p11.2 Seq+ 67411 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO15B-IGSF5 MYO15B chr17 73608097 - IGSF5 chr21 41163935 + Exonic hg19 PRAD TCGA-EJ-5525-01A 5 1 5'UTR-CDS Inter-chr q25.1 q22.2 67412 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO15B-LLGL2 MYO15B chr17 73592980 - LLGL2 chr17 73552127 + Exonic hg19 LGG TCGA-QH-A6CV-01A 6 3 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 67413 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO18A-ALDOB MYO18A chr17 27423779 - ALDOB chr9 104198056 - Exonic hg19 LIHC TCGA-BD-A3EP-01A 2 1 CDS-5'UTR Inter-chr q11.2 Oncogene q31.1 67414 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO18A-BCAS3 MYO18A chr17 27492960 - BCAS3 chr17 58987893 + Exonic hg19 THYM TCGA-ZB-A96L-01A 28 39 In-Frame Intra-chr q11.2 Oncogene q23.2 Seq+ 67415 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO18A-IGF2 MYO18A chr17 27421031 - IGF2 chr11 2170575 - Exonic hg19 KIRC TCGA-B8-A54K-01A 2 1 Out-of-frame Inter-chr q11.2 Oncogene p15.5 Oncogene 67416 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO18A-MSI2 MYO18A chr17 27507331 - MSI2 chr17 55334459 + Exonic hg19 BRCA TCGA-C8-A275-01A 5 5 5'UTR-CDS Intra-chr q11.2 Oncogene q22 67417 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO18A-NF1 MYO18A chr17 27492960 - NF1 chr17 29483001 + Exonic hg19 CHOL TCGA-W5-AA31-01A 21 12 In-Frame Intra-chr q11.2 Oncogene q11.2 Oncogene Tumor suppressor gene Seq+ 67418 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO18A-NUFIP2 MYO18A chr17 27492960 - NUFIP2 chr17 27594548 - Exonic hg19 BRCA TCGA-B6-A0RE-01A 4 3 Out-of-frame Intra-chr q11.2 Oncogene q11.2 Seq+ 67419 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO18A-RNF135 MYO18A chr17 27507331 - RNF135 chr17 29311635 + Exonic hg19 BLCA TCGA-DK-A3IK-01A 2 3 5'UTR-CDS Intra-chr q11.2 Oncogene q11.2 67420 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO18A-SERGEF MYO18A chr17 27492960 - SERGEF chr11 17899791 - Exonic hg19 BRCA TCGA-BH-A0DD-01A 8 7 In-Frame Inter-chr q11.2 Oncogene p15.1 Seq+ 67421 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO18A-ZBTB46 MYO18A chr17 27492960 - ZBTB46 chr20 62422143 - Exonic hg19 BRCA TCGA-AN-A0FV-01A 5 3 CDS-5'UTR Inter-chr q11.2 Oncogene q13.33 Transcription factor Seq+ 67422 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO18B-UBE2R2 MYO18B chr22 26228964 - UBE2R2 chr9 33911962 + Exonic hg19 GBM TCGA-19-2625-01A 8 19 Out-of-frame Inter-chr q12.1 Tumor suppressor gene p13.3 Seq+ 67423 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO19-SSH2 MYO19 chr17 34881059 - SSH2 chr17 28120955 - Exonic hg19 UCEC TCGA-BK-A26L-01C 6 12 In-Frame Intra-chr q12 q11.2 Seq+ 67424 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO19-STK32C MYO19 chr17 34881059 - STK32C chr10 134137877 - Exonic hg19 HNSC TCGA-DQ-5624-01A 5 4 CDS-5'UTR Inter-chr q12 q26.3 67425 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO1B-ABCC4 MYO1B chr2 192261223 - ABCC4 chr13 95887088 - Exonic hg19 PRAD TCGA-HC-7211-01A 2 3 In-Frame Inter-chr q32.3 q32.1 67426 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO1B-GLS MYO1B chr2 192290042 - GLS chr2 191759878 + Exonic hg19 BLCA TCGA-G2-A2ES-01A 2 1 3'UTR-CDS Intra-chr q32.3 q32.2 Tumor suppressor gene 67427 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO1B-SPAG16 MYO1B chr2 192141756 - SPAG16 chr2 215274864 + Exonic hg19 PRAD TCGA-G9-6499-01A 6 2 Out-of-frame Intra-chr q32.3 q34 Seq+ 67428 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO1B-STAT4 MYO1B chr2 192110352 - STAT4 chr2 192012930 - Exonic hg19 HNSC TCGA-BA-4075-01A 40 40 5'UTR-5'UTR Intra-chr q32.3 q32.3 Transcription factor Seq+ 67429 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO1B-ZNF536 MYO1B chr2 192214951 - ZNF536 chr19 30934468 + Exonic hg19 HNSC TCGA-CQ-6225-01A 2 1 CDS-5'UTR Inter-chr q32.3 q12 Transcription factor Seq+ 67430 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO1C-SMG6 MYO1C chr17 1377904 - SMG6 chr17 1989195 - Exonic hg19 LUSC TCGA-94-8491-01A 10 5 In-Frame Intra-chr p13.3 p13.3 Seq+ 67431 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO1C-SMTNL2 MYO1C chr17 1381704 - SMTNL2 chr17 4510656 + Exonic hg19 UCEC TCGA-AJ-A3BD-01A 14 8 In-Frame Intra-chr p13.3 p13.2 Seq+ 67432 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO1D-ACACA MYO1D chr17 31075954 - ACACA chr17 35482715 - Exonic hg19 BRCA TCGA-D8-A1J9-01A 7 7 Out-of-frame Intra-chr q11.2 Seq+ 67433 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO1D-ACCN1 MYO1D chr17 31203796 - ACCN1 chr17 31355410 - Exonic hg19 LUAD TCGA-78-7155-01A 2 1 Out-of-frame Intra-chr q11.2 67434 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO1D-ACCN1 MYO1D chr17 31039006 - ACCN1 chr17 31439085 - Exonic hg19 STAD TCGA-BR-4357-01A 4 1 Out-of-frame Intra-chr q11.2 67435 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO1D-ACCN1 MYO1D chr17 31203796 - ACCN1 chr17 31355410 - Exonic hg19 SARC TCGA-PC-A5DL-01A 5 2 Out-of-frame Intra-chr q11.2 67436 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO1D-FAIM3 MYO1D chr17 30980861 - FAIM3 chr1 207078492 - Exonic hg19 BRCA TCGA-A2-A04X-01A 8 7 In-Frame Inter-chr q11.2 Seq+ 67437 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO1D-HNF1B MYO1D chr17 31048041 - HNF1B chr17 36065056 - Exonic hg19 CHOL TCGA-W5-AA31-01A 6 3 Out-of-frame Intra-chr q11.2 q12 Transcription factor Seq+ 67438 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO1D-PLA2G6 MYO1D chr17 31203796 - PLA2G6 chr22 38565478 - Exonic hg19 LUAD TCGA-38-4630-01A 10 9 CDS-5'UTR Inter-chr q11.2 q13.1 Seq+ 67439 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO1D-PLXDC1 MYO1D chr17 30980861 - PLXDC1 chr17 37224212 - Exonic hg19 CESC TCGA-VS-A8EJ-01A 2 2 In-Frame Intra-chr q11.2 q12 Seq+ 67440 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO1D-SSH2 MYO1D chr17 30980861 - SSH2 chr17 28175947 - Exonic hg19 BRCA TCGA-A2-A04X-01A 4 12 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 67441 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO1D-TEX2 MYO1D chr17 31203796 - TEX2 chr17 62248559 - Exonic hg19 BRCA TCGA-GI-A2C8-01A 145 114 Out-of-frame Intra-chr q11.2 q23.3 Seq+ 67442 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO1D-TMIGD1 MYO1D chr17 31203796 - TMIGD1 chr17 28656547 - Exonic hg19 BRCA TCGA-AC-A3W5-01A 2 1 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 67443 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO1D-TMIGD1 MYO1D chr17 31203796 - TMIGD1 chr17 28656547 - Exonic hg19 BRCA TCGA-E2-A1LB-01A 33 15 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 67444 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO1E-BNIP2 MYO1E chr15 59664697 - BNIP2 chr15 59963513 - Exonic hg19 LUAD TCGA-44-7660-01A 142 63 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 67445 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO1E-BNIP2 MYO1E chr15 59664697 - BNIP2 chr15 59964938 - Exonic hg19 BRCA TCGA-A8-A07W-01A 3 2 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 67446 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO1E-C9orf3 MYO1E chr15 59548483 - C9orf3 chr9 97822976 + Exonic hg19 PRAD TCGA-ZG-A9L5-01A 47 25 Out-of-frame Inter-chr q22.2 q22.32 Seq+ 67447 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO1E-GPR176 MYO1E chr15 59510090 - GPR176 chr15 40099459 - Exonic hg19 STAD TCGA-CG-4444-01A 47 58 Out-of-frame Intra-chr q22.2 q15.1 Seq+ 67448 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO1E-TMCO3 MYO1E chr15 59664697 - TMCO3 chr13 114174931 + Exonic hg19 UCEC TCGA-PG-A914-01A 17 10 Out-of-frame Inter-chr q22.2 q34 Seq+ 67449 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO1F-LRSAM1 MYO1F chr19 8642191 - LRSAM1 chr9 130214208 + Exonic hg19 ACC TCGA-OR-A5K5-01A 4 4 CDS-5'UTR Inter-chr p13.2 q33.3 Seq+ 67450 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO5A-DCBLD2 MYO5A chr15 52599483 - DCBLD2 chr3 98520493 - Exonic hg19 SKCM TCGA-D9-A149-06A 2 6 3'UTR-CDS Inter-chr q21.2 q12.1 67451 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO5A-NEDD4 MYO5A chr15 52632393 - NEDD4 chr15 56216897 - Exonic hg19 SARC TCGA-VT-A80J-01A 11 7 In-Frame Intra-chr q21.2 q21.3 Tumor suppressor gene Seq+ 67452 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO5A-OIP5 MYO5A chr15 52689398 - OIP5 chr15 41611978 - Exonic hg19 BRCA TCGA-JL-A3YX-01A 7 11 In-Frame Intra-chr q21.2 q15.1 Seq+ 67453 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO5B-CCDC11 MYO5B chr18 47721137 - CCDC11 chr18 47788589 - Exonic hg19 BLCA TCGA-GV-A3JZ-01A 39 25 In-Frame Intra-chr q21.1 Seq+ 67454 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO5B-CLUL1 MYO5B chr18 47721137 - CLUL1 chr18 606978 + Exonic hg19 BRCA TCGA-E9-A1R6-01A 6 2 CDS-5'UTR Intra-chr q21.1 p11.32 Seq+ 67455 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO5B-COX6C MYO5B chr18 47500720 - COX6C chr8 100904280 - Exonic hg19 UCEC TCGA-DI-A2QY-01A 38 31 CDS-5'UTR Inter-chr q21.1 q22.2 Seq+ 67456 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO5B-DCC MYO5B chr18 47721137 - DCC chr18 50278424 + Exonic hg19 BLCA TCGA-ZF-AA4T-01A 3 2 Out-of-frame Intra-chr q21.1 q21.2 Oncogene Tumor suppressor gene Seq+ 67457 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO5B-DYM MYO5B chr18 47721137 - DYM chr18 46645296 - Exonic hg19 BRCA TCGA-BH-A18T-01A 15 18 In-Frame Intra-chr q21.1 q21.1 Seq+ 67458 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO5B-LPIN2 MYO5B chr18 47361714 - LPIN2 chr18 2960847 - Exonic hg19 COAD TCGA-CA-5256-01A 2 1 CDS-5'UTR Intra-chr q21.1 p11.31 67459 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO5B-MBD1 MYO5B chr18 47721137 - MBD1 chr18 47803574 - Exonic hg19 LUSC TCGA-77-8140-01A 3 1 Out-of-frame Intra-chr q21.1 q21.1 Oncogene Transcription factor 67460 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO5C-HAUS8 MYO5C chr15 52536553 - HAUS8 chr19 17163776 - Exonic hg19 UCEC TCGA-AJ-A3NF-01A 7 8 Out-of-frame Inter-chr q21.2 p13.11 Seq+ 67461 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO6-CRYL1 MYO6 chr6 76459140 - CRYL1 chr13 20987526 - Exonic hg19 MESO TCGA-MQ-A4KX-01A 3 12 5'UTR-CDS Inter-chr q14.1 q12.11 Seq+ 67462 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO6-DEPTOR MYO6 chr6 76527381 - DEPTOR chr8 120977472 + Exonic hg19 UCEC TCGA-AP-A5FX-01A 8 10 Out-of-frame Inter-chr q14.1 q24.12 Seq+ 67463 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO6-NEGR1 MYO6 chr6 76558248 - NEGR1 chr1 72163822 - Exonic hg19 PRAD TCGA-HC-8262-01A 10 5 In-Frame Inter-chr q14.1 p31.1 Seq+ 67464 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO6-SENP6 MYO6 chr6 76459140 - SENP6 chr6 76385151 + Exonic hg19 LUAD TCGA-05-4244-01A 8 8 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 67465 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO6-SENP6 MYO6 chr6 76459140 - SENP6 chr6 76405520 + Exonic hg19 LUAD TCGA-44-4112-01A 5 2 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 67466 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO6-SENP6 MYO6 chr6 76459140 - SENP6 chr6 76405520 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 12 10 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 67467 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO6-SENP6 MYO6 chr6 76459140 - SENP6 chr6 76423229 + Exonic hg19 UCEC TCGA-B5-A0JN-01A 5 4 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 67468 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO6-SENP6 MYO6 chr6 76459140 - SENP6 chr6 76405520 + Exonic hg19 BRCA TCGA-D8-A1JM-01A 2 2 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 67469 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO6-SENP6 MYO6 chr6 76459140 - SENP6 chr6 76419243 + Exonic hg19 HNSC TCGA-DQ-7589-01A 5 1 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 67470 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO6-SENP6 MYO6 chr6 76527381 - SENP6 chr6 76421044 + Exonic hg19 UCS TCGA-N5-A4RJ-01A 8 5 In-Frame Intra-chr q14.1 q14.1 Seq+ 67471 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO7A-GAB2 MYO7A chr11 76924080 - GAB2 chr11 77934722 - Exonic hg19 BRCA TCGA-AO-A0JG-01A 2 2 In-Frame Intra-chr q13.5 q14.1 67472 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO7A-ZNF512 MYO7A chr11 76913469 - ZNF512 chr2 27844020 + Exonic hg19 UCS TCGA-N9-A4Q1-01A 7 2 Out-of-frame Inter-chr q13.5 p23.3 Transcription factor Seq+ 67473 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO9A-CELF6 MYO9A chr15 72410021 - CELF6 chr15 72582596 - Exonic hg19 BLCA TCGA-BT-A3PJ-01A 14 6 5'UTR-CDS Intra-chr q23 q23 Seq+ 67474 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO9A-CRAMP1L MYO9A chr15 72338065 - CRAMP1L chr16 1682213 + Exonic hg19 BRCA TCGA-B6-A0IM-01A 19 7 In-Frame Inter-chr q23 Seq+ 67475 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO9A-GRAMD2 MYO9A chr15 72410021 - GRAMD2 chr15 72455817 - Exonic hg19 BRCA TCGA-BH-A0AV-01A 2 8 5'UTR-CDS Intra-chr q23 q23 Seq+ 67476 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO9A-GRB2 MYO9A chr15 72410021 - GRB2 chr17 73328878 - Exonic hg19 UCEC TCGA-EY-A210-01A 9 7 5'UTR-CDS Inter-chr q23 q25.1 Seq+ 67477 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO9A-HEXA MYO9A chr15 72410021 - HEXA chr15 72648958 - Exonic hg19 BRCA TCGA-LL-A5YP-01A 7 4 5'UTR-CDS Intra-chr q23 q23 Seq+ 67478 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO9A-PARP6 MYO9A chr15 72410021 - PARP6 chr15 72535040 - Exonic hg19 UCEC TCGA-AX-A3G4-01A 113 65 5'UTR-CDS Intra-chr q23 q23 Seq+ 67479 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO9A-TMEM59 MYO9A chr15 72208711 - TMEM59 chr1 54509198 - Exonic hg19 BRCA TCGA-A8-A07O-01A 89 70 In-Frame Inter-chr q23 p32.3 Seq+ 67480 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO9B-ATP13A1 MYO9B chr19 17213367 - ATP13A1 chr19 19758337 - Exonic hg19 OV TCGA-61-2102-01A 5 5 In-Frame Intra-chr p13.11 p13.11 Seq+ 67481 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO9B-DOCK6 MYO9B chr19 17213367 - DOCK6 chr19 11364402 - Exonic hg19 SKCM TCGA-D3-A3CC-06A 9 4 Out-of-frame Intra-chr p13.11 p13.2 Seq+ 67482 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYO9B-PNN MYO9B chr19 17273932 - PNN chr14 39645731 + Exonic hg19 BRCA TCGA-B6-A1KN-01A 3 4 Out-of-frame Inter-chr p13.11 q21.1 Tumor suppressor gene Seq+ 67483 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYPN-PLXDC2 MYPN chr10 69918384 - PLXDC2 chr10 20453397 + Exonic hg19 SARC TCGA-FX-A76Y-01A 3 5 Out-of-frame Intra-chr q21.3 p12.31 Seq+ 67484 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYRIP-MLH1 MYRIP chr3 39942417 - MLH1 chr3 37089010 + Exonic hg19 PRAD TCGA-KK-A5A1-01A 45 39 Out-of-frame Intra-chr p22.1 p22.2 Oncogene Tumor suppressor gene Seq+ 67485 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYSM1-ALG14 MYSM1 chr1 59165657 - ALG14 chr1 95448862 - Exonic hg19 BRCA TCGA-A7-A5ZV-01A 69 69 Out-of-frame Intra-chr p32.1 Transcription factor p21.3 Seq+ 67486 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYSM1-APOM MYSM1 chr1 59160801 - APOM chr6 31624249 + Exonic hg19 BRCA TCGA-BH-A18L-01A 69 83 In-Frame Inter-chr p32.1 Transcription factor Seq+ 67487 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYSM1-ATG4C MYSM1 chr1 59165657 - ATG4C chr1 63329663 + Exonic hg19 TGCT TCGA-YU-AA61-01A 2 3 Out-of-frame Intra-chr p32.1 Transcription factor p31.3 67488 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYSM1-DAB1 MYSM1 chr1 59150825 - DAB1 chr1 57611102 - Exonic hg19 LUSC TCGA-85-A513-01A 5 3 Out-of-frame Intra-chr p32.1 Transcription factor p32.1 Seq+ 67489 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYT1-ST8SIA1 MYT1 chr20 62859324 - ST8SIA1 chr12 22478393 - Exonic hg19 LGG TCGA-E1-A7YW-01A 3 5 Out-of-frame Inter-chr Other:WEE Transcription factor p12.1 Seq+ 67490 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYT1-TCEA2 MYT1 chr20 62783263 - TCEA2 chr20 62697829 + Exonic hg19 LUSC TCGA-77-8140-01A 5 2 5'UTR-5'UTR Intra-chr Other:WEE Transcription factor q13.33 Seq+ 67491 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MYT1L-POMC MYT1L chr2 2057750 - POMC chr2 25387661 - Exonic hg19 KIRP TCGA-G7-6792-01A 4 2 5'UTR-5'UTR Intra-chr p25.3 Transcription factor p23.3 Seq+ 67492 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq MZF1-CCDC105 MZF1 chr19 59080883 - CCDC105 chr19 15131273 + Exonic hg19 LUSC TCGA-22-5479-01A 3 2 In-Frame Intra-chr q13.43 Transcription factor p13.12 Seq+ 67493 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq N4BP1-DDX19B N4BP1 chr16 48643686 - DDX19B chr16 70358488 + Exonic hg19 LUSC TCGA-94-A4VJ-01A 87 35 Out-of-frame Intra-chr q12.1 q22.1 Seq+ 67494 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq N4BP1-EEA1 N4BP1 chr16 48572639 - EEA1 chr12 93229203 - Exonic hg19 SARC TCGA-DX-A23R-01A 4 18 Out-of-frame Inter-chr q12.1 q22 Transcription factor 67495 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq N4BP1-GPATCH2 N4BP1 chr16 48643686 - GPATCH2 chr1 217793841 - Exonic hg19 SARC TCGA-FX-A2QS-01A 3 2 Out-of-frame Inter-chr q12.1 q41 Seq+ 67496 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq N4BP1-NAV3 N4BP1 chr16 48594665 - NAV3 chr12 78510552 + Exonic hg19 SARC TCGA-DX-A23R-01A 4 12 In-Frame Inter-chr q12.1 q21.2 67497 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq N4BP2L2-ZMYM5 N4BP2L2 chr13 33112755 - ZMYM5 chr13 20413125 - Exonic hg19 SKCM TCGA-ER-A42L-06A 3 1 5'UTR-CDS Intra-chr q13.1 q12.11 Seq+ 67498 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAA15-C4orf37 NAA15 chr4 140283091 - C4orf37 chr4 99055610 - Exonic hg19 LUAD TCGA-86-7955-01A 10 4 In-Frame Intra-chr q31.1 67499 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAA15-HHIP NAA15 chr4 140222985 - HHIP chr4 145580789 + Exonic hg19 PRAD TCGA-V1-A9OQ-01A 4 2 Out-of-frame Intra-chr q31.1 q31.21 67500 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAA15-LPAR1 NAA15 chr4 140222985 - LPAR1 chr9 113638002 - Exonic hg19 GBM TCGA-06-0129-01A 16 33 Out-of-frame Inter-chr q31.1 q31.3 Seq+ 67501 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAA15-SLC10A7 NAA15 chr4 140291558 - SLC10A7 chr4 147179989 - Exonic hg19 BRCA TCGA-E9-A3Q9-01A 9 6 Out-of-frame Intra-chr q31.1 q31.22 Seq+ 67502 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAA16-KIAA0564 NAA16 chr13 41946447 - KIAA0564 chr13 42352192 - Exonic hg19 BRCA TCGA-PL-A8LZ-01A 2 1 Out-of-frame Intra-chr q14.11 67503 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAA25-SLC25A21 NAA25 chr12 112525487 - SLC25A21 chr14 37154130 - Exonic hg19 HNSC TCGA-CV-6940-01A 117 66 In-Frame Inter-chr q24.13 q13.3 Seq+ 67504 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAA25-TBX5 NAA25 chr12 112518864 - TBX5 chr12 114793911 - Exonic hg19 BRCA TCGA-A2-A04U-01A 9 15 Out-of-frame Intra-chr q24.13 q24.21 Tumor suppressor gene Transcription factor Seq+ 67505 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAA25-WSCD2 NAA25 chr12 112546520 - WSCD2 chr12 108620767 + Exonic hg19 PRAD TCGA-HC-7230-01A 14 8 Out-of-frame Intra-chr q24.13 q23.3 Seq+ 67506 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAA30-TERT NAA30 chr14 57866601 - TERT chr5 1282739 - Exonic hg19 GBM TCGA-27-1835-01A 5 8 Out-of-frame Inter-chr q22.3 p15.33 Oncogene Seq+ 67507 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAA35-LAMC3 NAA35 chr9 88628812 - LAMC3 chr9 133951218 + Exonic hg19 BLCA TCGA-CU-A3YL-01A 9 5 In-Frame Intra-chr q21.33 q34.12 Seq+ 67508 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAA35-MRPS2 NAA35 chr9 88577095 - MRPS2 chr9 138392416 + Exonic hg19 LUAD TCGA-97-8174-01A 2 1 Out-of-frame Intra-chr q21.33 q34.3 67509 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAA50-CD47 NAA50 chr3 113464789 - CD47 chr3 107799191 - Exonic hg19 PRAD TCGA-EJ-7317-01A 4 1 Out-of-frame Intra-chr q13.31 q13.12 67510 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAA60-IL32 NAA60 chr16 3508181 - IL32 chr16 3115785 + Exonic hg19 GBM TCGA-06-5856-01A 23 69 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 67511 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAA60-KIAA0174 NAA60 chr16 3493827 - KIAA0174 chr16 71949529 + Exonic hg19 PRAD TCGA-EJ-5530-01A 5 8 Out-of-frame Intra-chr p13.3 67512 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAALADL2-ABCC5 NAALADL2 chr3 175345174 - ABCC5 chr3 183643507 - Exonic hg19 LUSC TCGA-33-4538-01A 45 27 In-Frame Intra-chr q26.31 q27.1 Seq+ 67513 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAALADL2-DRD3 NAALADL2 chr3 175455187 - DRD3 chr3 113858543 - Exonic hg19 HNSC TCGA-BB-4223-01A 2 1 In-Frame Intra-chr q26.31 q13.31 67514 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAALADL2-FBXO45 NAALADL2 chr3 175189546 - FBXO45 chr3 196304324 + Exonic hg19 BRCA TCGA-D8-A27N-01A 7 5 In-Frame Intra-chr q26.31 q29 Seq+ 67515 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAALADL2-MCCC1 NAALADL2 chr3 175345174 - MCCC1 chr3 182755222 - Exonic hg19 LUSC TCGA-56-7730-01A 12 2 In-Frame Intra-chr q26.31 q27.1 Seq+ 67516 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAALADL2-NCKAP5 NAALADL2 chr3 175189546 - NCKAP5 chr2 133626547 - Exonic hg19 LUSC TCGA-70-6722-01A 7 2 In-Frame Inter-chr q26.31 q21.2 Seq+ 67517 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAALADL2-NLGN1 NAALADL2 chr3 174577240 - NLGN1 chr3 173322069 + Exonic hg19 BRCA TCGA-D8-A27M-01A 8 7 CDS-5'UTR Intra-chr q26.31 q26.31 Seq+ 67518 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAALADL2-NLGN1 NAALADL2 chr3 174577240 - NLGN1 chr3 173993105 + Exonic hg19 PRAD TCGA-YL-A8S8-01A 4 7 In-Frame Intra-chr q26.31 q26.31 Seq+ 67519 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAALADL2-PEX5L NAALADL2 chr3 175189546 - PEX5L chr3 179537764 - Exonic hg19 BRCA TCGA-AO-A0JM-01A 11 6 In-Frame Intra-chr q26.31 q26.33 Seq+ 67520 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAALADL2-RSRC1 NAALADL2 chr3 174577240 - RSRC1 chr3 158015828 + Exonic hg19 PRAD TCGA-EJ-7792-01A 2 2 Out-of-frame Intra-chr q26.31 q25.32 67521 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAALADL2-SMC5 NAALADL2 chr3 174577240 - SMC5 chr9 72959060 + Exonic hg19 LUSC TCGA-56-1622-01A 3 1 Out-of-frame Inter-chr q26.31 q21.12 Seq+ 67522 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAALADL2-TIGIT NAALADL2 chr3 174455536 - TIGIT chr3 114012847 + Exonic hg19 LGG TCGA-TM-A84B-01A 8 4 Out-of-frame Intra-chr q26.31 q13.31 Seq+ 67523 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAALADL2-VPS13C NAALADL2 chr3 174158822 - VPS13C chr15 62306191 - Exonic hg19 SKCM TCGA-DA-A1HW-06A 2 5 5'UTR-CDS Inter-chr q26.31 q22.2 Seq+ 67524 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAB1-GULP1 NAB1 chr2 191537878 - GULP1 chr2 189448992 + Exonic hg19 LUSC TCGA-NC-A5HE-01A 4 2 In-Frame Intra-chr q32.2 q32.1 Seq+ 67525 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAB1-STEAP3 NAB1 chr2 191514086 - STEAP3 chr2 120020633 + Exonic hg19 SKCM TCGA-D9-A4Z5-01A 4 2 5'UTR-CDS Intra-chr q32.2 q14.2 Seq+ 67526 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAB2-STAT6 NAB2 chr12 57487381 - STAT6 chr12 57493223 - Exonic hg19 MESO TCGA-SH-A7BH-01A 6 4 In-Frame Intra-chr q13.3 q13.3 Transcription factor KB Pub Seq+ 67527 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NADK-C1orf222 NADK chr1 1709728 - C1orf222 chr1 1903521 - Exonic hg19 OV TCGA-20-1683-01A 3 3 Out-of-frame Intra-chr p36.33 Seq+ 67528 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NADK-C1orf222 NADK chr1 1693391 - C1orf222 chr1 1861775 - Exonic hg19 BRCA TCGA-D8-A27H-01A 17 11 Out-of-frame Intra-chr p36.33 Seq+ 67529 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NADK-GNB1 NADK chr1 1688620 - GNB1 chr1 1720708 - Exonic hg19 HNSC TCGA-DQ-7591-01A 88 57 In-Frame Intra-chr p36.33 p36.33 Seq+ 67530 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NADK-GNB1 NADK chr1 1709728 - GNB1 chr1 1770677 - Exonic hg19 LGG TCGA-HT-7468-01A 23 49 5'UTR-5'UTR Intra-chr p36.33 p36.33 Seq+ 67531 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NADK-TOM1L2 NADK chr1 1711344 - TOM1L2 chr17 17766162 - Exonic hg19 STAD TCGA-FP-8631-01A 3 4 5'UTR-CDS Inter-chr p36.33 p11.2 Tumor suppressor gene Seq+ 67532 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NADKD1-RANBP3L NADKD1 chr5 36207272 - RANBP3L chr5 36271413 - Exonic hg19 TGCT TCGA-2G-AAGI-01A 4 2 Out-of-frame Intra-chr p13.2 67533 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NADKD1-RANBP3L NADKD1 chr5 36241601 - RANBP3L chr5 36265622 - Exonic hg19 READ TCGA-F5-6814-01A 4 1 Out-of-frame Intra-chr p13.2 67534 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NADSYN1-C11orf34 NADSYN1 chr11 71192450 - C11orf34 chr11 112123132 - Exonic hg19 LUSC TCGA-18-4086-01A 6 5 Out-of-frame Intra-chr q13.4 Seq+ 67535 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NADSYN1-PAK1 NADSYN1 chr11 71169590 - PAK1 chr11 77103586 - Exonic hg19 LIHC TCGA-2Y-A9H2-01A 5 4 CDS-5'UTR Intra-chr q13.4 q14.1 STE:STE20 Seq+ 67536 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NADSYN1-PPP6R3 NADSYN1 chr11 71189515 - PPP6R3 chr11 68321613 + Exonic hg19 SKCM TCGA-D9-A3Z3-06A 16 14 In-Frame Intra-chr q13.4 q13.2 Seq+ 67537 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NADSYN1-SHANK2 NADSYN1 chr11 71202949 - SHANK2 chr11 70742672 - Exonic hg19 BRCA TCGA-C8-A12O-01A 2 5 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 67538 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NADSYN1-SPAG9 NADSYN1 chr11 71193071 - SPAG9 chr17 49048217 - Exonic hg19 ESCA TCGA-L5-A43I-01A 2 15 In-Frame Inter-chr q13.4 q21.33 Seq+ 67539 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NADSYN1-TRIM9 NADSYN1 chr11 71189515 - TRIM9 chr14 51492078 - Exonic hg19 BRCA TCGA-A2-A0D4-01A 3 5 In-Frame Inter-chr q13.4 q22.1 Seq+ 67540 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAGA-TCF20 NAGA chr22 42456928 - TCF20 chr22 42575708 - Exonic hg19 BRCA TCGA-BH-A18V-06A 2 9 In-Frame Intra-chr q13.2 Transcription factor Seq+ 67541 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAGA-WBP2NL NAGA chr22 42458831 - WBP2NL chr22 42426724 + Exonic hg19 BRCA TCGA-AC-A2BM-01A 10 14 CDS-3'UTR Intra-chr q13.2 q13.2 Seq+ 67542 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAGS-PYY NAGS chr17 42082457 - PYY chr17 42043900 - Exonic hg19 STAD TCGA-VQ-A925-01A 4 4 CDS-5'UTR Intra-chr q21.31 q21.31 67543 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAP1L1-OSTF1 NAP1L1 chr12 76467983 - OSTF1 chr9 77752454 + Exonic hg19 SARC TCGA-DX-A6BE-01A 538 425 Out-of-frame Inter-chr q21.2 q21.13 Seq+ 67544 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAP1L1-PTPRR NAP1L1 chr12 76478347 - PTPRR chr12 71158558 - Exonic hg19 SARC TCGA-DX-A3LT-01A 66 34 5'UTR-CDS Intra-chr q21.2 q15 Seq+ 67545 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAP1L1-STK38L NAP1L1 chr12 76478347 - STK38L chr12 27450643 + Exonic hg19 BRCA TCGA-BH-A1FN-01A 17 21 5'UTR-5'UTR Intra-chr q21.2 p11.23 Seq+ 67546 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAP1L4-ATP11B NAP1L4 chr11 2985910 - ATP11B chr3 182631649 + Exonic hg19 PRAD TCGA-FC-A4JI-01A 68 59 In-Frame Inter-chr q26.33 Oncogene Seq+ 67547 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAP1L4-RPAP1 NAP1L4 chr11 2997254 - RPAP1 chr15 41829399 - Exonic hg19 BRCA TCGA-E2-A1LL-01A 9 8 CDS-5'UTR Inter-chr q15.1 Seq+ 67548 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAPA-C1orf98 NAPA chr19 48018100 - C1orf98 chr1 200311885 - Exonic hg19 LIHC TCGA-XR-A8TD-01A 47 10 3'UTR-3'UTR Inter-chr q13.33 67549 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAPA-PLAC1 NAPA chr19 48018100 - PLAC1 chrX 133700770 - Exonic hg19 SARC TCGA-IE-A4EH-01A 112 82 CDS-5'UTR Inter-chr q13.33 q26.3 Seq+ 67550 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAPB-CST9L NAPB chr20 23375559 - CST9L chr20 23546724 - Exonic hg19 READ TCGA-DC-6157-01A 5 8 In-Frame Intra-chr p11.21 p11.21 Seq+ 67551 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAPEPLD-RELN NAPEPLD chr7 102768930 - RELN chr7 103143677 - Exonic hg19 UCEC TCGA-AJ-A2QM-01A 18 5 In-Frame Intra-chr Tumor suppressor gene q22.1 Seq+ 67552 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAPG-FAM38B NAPG chr18 10534493 - FAM38B chr18 10682289 - Exonic hg19 LUSC TCGA-98-A53A-01A 19 17 Out-of-frame Intra-chr p11.22 67553 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAPG-GREB1L NAPG chr18 10530834 - GREB1L chr18 19052992 + Exonic hg19 BRCA TCGA-AN-A04A-01A 22 5 In-Frame Intra-chr p11.22 q11.1 Seq+ 67554 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAPSA-CLCN3 NAPSA chr19 50861735 - CLCN3 chr4 170623929 + Exonic hg19 LUAD TCGA-50-8460-01A 2 186 Out-of-frame Inter-chr q13.33 q33 67555 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAPSA-DDX27 NAPSA chr19 50861735 - DDX27 chr20 47849303 + Exonic hg19 LUAD TCGA-55-8206-01A 2 139 Out-of-frame Inter-chr q13.33 q13.13 67556 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAPSA-RNF213 NAPSA chr19 50861735 - RNF213 chr17 78261614 + Exonic hg19 LUAD TCGA-55-A494-01A 2 2 3'UTR-CDS Inter-chr q13.33 q25.3 Oncogene 67557 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAPSA-SEC63 NAPSA chr19 50861735 - SEC63 chr6 108214782 - Exonic hg19 LUAD TCGA-69-7974-01A 2 42 Out-of-frame Inter-chr q13.33 q21 67558 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NARF-HEXDC NARF chr17 80426772 - HEXDC chr17 80397507 + Exonic hg19 CESC TCGA-VS-A8EK-01A 29 24 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 67559 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NARF-KRT24 NARF chr17 80422306 - KRT24 chr17 38858185 - Exonic hg19 UCS TCGA-N6-A4VF-01A 2 4 In-Frame Intra-chr q25.3 q21.2 Seq+ 67560 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NARFL-RBBP6 NARFL chr16 790920 - RBBP6 chr16 24557484 + Exonic hg19 BRCA TCGA-AN-A0FZ-01A 9 6 Out-of-frame Intra-chr p13.3 p12.1 Seq+ 67561 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NARS2-ME3 NARS2 chr11 78176922 - ME3 chr11 86270865 - Exonic hg19 LUAD TCGA-78-7148-01A 3 2 In-Frame Intra-chr q14.1 q14.2 67562 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NARS2-TOP1 NARS2 chr11 78239888 - TOP1 chr20 39721112 + Exonic hg19 BRCA TCGA-BH-A0HL-01A 52 20 In-Frame Inter-chr q14.1 q12 Oncogene Seq+ 67563 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NASP-PIK3R3 NASP chr1 46049877 - PIK3R3 chr1 46512297 - Exonic hg19 PRAD TCGA-2A-A8VL-01A 2 2 In-Frame Intra-chr p34.1 p34.1 67564 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAT10-CAPRIN1 NAT10 chr11 34127339 - CAPRIN1 chr11 34118026 + Exonic hg19 OV TCGA-13-1501-01A 2 5 5'UTR-CDS Intra-chr p13 p13 Seq+ 67565 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAT10-CAPRIN1 NAT10 chr11 34130380 - CAPRIN1 chr11 34118026 + Exonic hg19 BRCA TCGA-AN-A0XU-01A 15 23 Out-of-frame Intra-chr p13 p13 Seq+ 67566 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAT8L-DBNDD1 NAT8L chr4 2062889 - DBNDD1 chr16 90075838 - Exonic hg19 GBM TCGA-06-0157-01A 8 18 In-Frame Inter-chr p16.3 q24.3 Seq+ 67567 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAV2-C11orf46 NAV2 chr11 19735508 - C11orf46 chr11 30352433 + Exonic hg19 SKCM TCGA-WE-A8ZR-06A 56 41 CDS-5'UTR Intra-chr p15.1 67568 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAV2-CNTN5 NAV2 chr11 19890543 - CNTN5 chr11 100126492 + Exonic hg19 LUAD TCGA-55-7576-01A 34 9 In-Frame Intra-chr p15.1 q22.1 Seq+ 67569 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAV2-CNTN5 NAV2 chr11 19968055 - CNTN5 chr11 99196077 + Exonic hg19 BRCA TCGA-AO-A0JD-01A 7 4 CDS-5'UTR Intra-chr p15.1 q22.1 Seq+ 67570 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAV2-EHF NAV2 chr11 20005793 - EHF chr11 34664175 + Exonic hg19 BRCA TCGA-E2-A14R-01A 2 2 Out-of-frame Intra-chr p15.1 p13 Tumor suppressor gene Transcription factor 67571 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAV2-ERC1 NAV2 chr11 19914140 - ERC1 chr12 1599259 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 59 54 Out-of-frame Inter-chr p15.1 Seq+ 67572 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NAV2-PACSIN3 NAV2 chr11 20104725 - PACSIN3 chr11 47204620 - Exonic hg19 BRCA TCGA-AR-A251-01A 13 21 CDS-5'UTR Intra-chr p15.1 p11.2 Seq+ 67573 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NBAS-ALB NBAS chr2 15307033 - ALB chr4 74270025 + Exonic hg19 LIHC TCGA-DD-A11A-01A 2 1 Out-of-frame Inter-chr p24.3 q13.3 67574 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NBAS-ALB NBAS chr2 15307033 - ALB chr4 74270025 + Exonic hg19 LIHC TCGA-DD-AACH-01A 2 6 Out-of-frame Inter-chr p24.3 q13.3 67575 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NBAS-C2orf82 NBAS chr2 15691617 - C2orf82 chr2 233734995 + Exonic hg19 GBM TCGA-06-0156-01A 8 32 CDS-5'UTR Intra-chr p24.3 q37.1 Seq+ 67576 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NBAS-DDX1 NBAS chr2 15467874 - DDX1 chr2 15735269 + Exonic hg19 LUSC TCGA-85-6561-01A 26 12 In-Frame Intra-chr p24.3 p24.3 Seq+ 67577 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NBAS-PQLC3 NBAS chr2 15326866 - PQLC3 chr2 11300592 + Exonic hg19 UCS TCGA-N9-A4Q3-01A 2 3 Out-of-frame Intra-chr p24.3 p25.1 Seq+ 67578 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NBAS-RASGRP3 NBAS chr2 15415608 - RASGRP3 chr2 33787796 + Exonic hg19 UCEC TCGA-AX-A3G3-01A 8 2 In-Frame Intra-chr p24.3 p22.3 67579 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NBAS-SPIRE1 NBAS chr2 15555670 - SPIRE1 chr18 12512530 - Exonic hg19 UCS TCGA-N8-A4PO-01A 2 1 In-Frame Inter-chr p24.3 p11.21 Seq+ 67580 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NBAS-THADA NBAS chr2 15467874 - THADA chr2 43819555 - Exonic hg19 BRCA TCGA-AO-A0J4-01A 2 1 CDS-5'UTR Intra-chr p24.3 p21 67581 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NBEA-BRCA2 NBEA chr13 35770439 - BRCA2 chr13 32899213 + Exonic hg19 SARC TCGA-DX-A48J-01A 3 1 Out-of-frame Intra-chr q13.3 q13.1 Oncogene Tumor suppressor gene Seq+ 67582 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NBEA-FNDC3A NBEA chr13 35806756 - FNDC3A chr13 49688791 + Exonic hg19 SARC TCGA-HS-A5NA-01A 7 6 In-Frame Intra-chr q13.3 q14.2 Seq+ 67583 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NBEA-GLT25D2 NBEA chr13 36046673 - GLT25D2 chr1 183947654 - Exonic hg19 PCPG TCGA-QT-A5XO-01A 8 2 Out-of-frame Inter-chr q13.3 67584 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NBEA-NDFIP2 NBEA chr13 35517251 - NDFIP2 chr13 80094945 + Exonic hg19 LUAD TCGA-50-6591-01A 13 11 In-Frame Intra-chr q13.3 q31.1 67585 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NBEA-POSTN NBEA chr13 35883729 - POSTN chr13 38171419 - Exonic hg19 PRAD TCGA-CH-5753-01A 2 1 In-Frame Intra-chr q13.3 q13.3 67586 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NBEAL1-AC079354.1 NBEAL1 chr2 203949292 - AC079354.1 chr2 203019396 + Exonic hg19 UCS TCGA-NA-A4R1-01A 7 3 Out-of-frame Intra-chr q33.2 q33.1 67587 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NBEAL1-MLLT3 NBEAL1 chr2 204067504 - MLLT3 chr9 20365742 - Exonic hg19 LUSC TCGA-68-7755-01A 6 6 In-Frame Inter-chr q33.2 p21.3 Seq+ 67588 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NBEAL1-TANK NBEAL1 chr2 203975005 - TANK chr2 162080426 + Exonic hg19 BRCA TCGA-E2-A14Z-01A 9 9 In-Frame Intra-chr q33.2 q24.2 Tumor suppressor gene Seq+ 67589 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NBEAL2-ATP2A3 NBEAL2 chr3 47021402 - ATP2A3 chr17 3848442 - Exonic hg19 STAD TCGA-BR-7901-01A 4 17 In-Frame Inter-chr p21.31 p13.2 Seq+ 67590 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NBEAL2-TMC2 NBEAL2 chr3 47021402 - TMC2 chr20 2559792 + Exonic hg19 BRCA TCGA-C8-A274-01A 3 4 In-Frame Inter-chr p21.31 p13 Seq+ 67591 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NBL1-C1orf151 NBL1 chr1 19970940 - C1orf151 chr1 19948594 + Exonic hg19 ESCA TCGA-JY-A93F-01A 8 18 Out-of-frame Intra-chr p36.13 67592 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NBL1-STAT6 NBL1 chr1 19984945 - STAT6 chr12 57496773 - Exonic hg19 PAAD TCGA-HZ-7924-01A 2 15 Out-of-frame Inter-chr p36.13 q13.3 Transcription factor 67593 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NBN-RIPK2 NBN chr8 90976638 - RIPK2 chr8 90796278 + Exonic hg19 BLCA TCGA-E7-A85H-01A 3 4 Out-of-frame Intra-chr q21.3 Oncogene Tumor suppressor gene q21.3 TKL:RIPK Seq+ 67594 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NBN-SLC26A7 NBN chr8 90994950 - SLC26A7 chr8 92406025 + Exonic hg19 ESCA TCGA-RE-A7BO-01A 2 2 In-Frame Intra-chr q21.3 Oncogene Tumor suppressor gene q21.3 67595 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NBPF3-EPHB2 NBPF3 chr1 21771712 - EPHB2 chr1 23189530 + Exonic hg19 GBM TCGA-28-2513-01A 5 12 In-Frame Intra-chr p36.12 p36.12 Tumor suppressor gene Seq+ 67596 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NBR1-C17orf104 NBR1 chr17 41345655 - C17orf104 chr17 42751344 + Exonic hg19 PRAD TCGA-YL-A8SC-01A 192 90 Out-of-frame Intra-chr q21.31 Seq+ 67597 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NBR1-RUNDC3A NBR1 chr17 41355803 - RUNDC3A chr17 42395464 + Exonic hg19 BRCA TCGA-EW-A2FS-01A 8 4 Out-of-frame Intra-chr q21.31 q21.31 67598 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCALD-LAPTM4B NCALD chr8 102928037 - LAPTM4B chr8 98817581 + Exonic hg19 LGG TCGA-HT-8106-01A 14 9 5'UTR-CDS Intra-chr q22.3 q22.1 Seq+ 67599 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCALD-NSMCE2 NCALD chr8 102803090 - NSMCE2 chr8 126369461 + Exonic hg19 LUSC TCGA-66-2754-01A 49 42 5'UTR-CDS Intra-chr q22.3 q24.13 Seq+ 67600 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCALD-SLC5A11 NCALD chr8 102803090 - SLC5A11 chr16 24873922 + Exonic hg19 BRCA TCGA-A7-A6VY-01A 4 2 5'UTR-5'UTR Inter-chr q22.3 p12.1 67601 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCALD-UBR5 NCALD chr8 103136465 - UBR5 chr8 103279235 - Exonic hg19 UCEC TCGA-A5-A7WK-01A 6 7 5'UTR-CDS Intra-chr q22.3 q22.3 Oncogene Seq+ 67602 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCALD-UBR5 NCALD chr8 102731480 - UBR5 chr8 103266742 - Exonic hg19 UCEC TCGA-PG-A914-01A 20 13 In-Frame Intra-chr q22.3 q22.3 Oncogene Seq+ 67603 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCALD-UBR5 NCALD chr8 103032465 - UBR5 chr8 103317523 - Exonic hg19 CESC TCGA-VS-A9V0-01A 3 1 5'UTR-CDS Intra-chr q22.3 q22.3 Oncogene Seq+ 67604 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCAM2-APOL2 NCAM2 chr21 22370936 - APOL2 chr22 36629501 - Exonic hg19 LUSC TCGA-22-A5C4-01A 2 2 CDS-5'UTR Inter-chr q21.1 Tumor suppressor gene q12.3 67605 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCAM2-CRYL1 NCAM2 chr21 22370936 - CRYL1 chr13 20978880 - Exonic hg19 PRAD TCGA-EJ-5512-01A 20 12 In-Frame Inter-chr q21.1 Tumor suppressor gene q12.11 Seq+ 67606 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCAM2-RORB NCAM2 chr21 22370936 - RORB chr9 77245198 + Exonic hg19 SARC TCGA-QC-AA9N-01A 2 1 In-Frame Inter-chr q21.1 Tumor suppressor gene q21.13 Transcription factor 67607 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCAM2-TMPRSS15 NCAM2 chr21 22370936 - TMPRSS15 chr21 19653538 - Exonic hg19 LGG TCGA-P5-A72W-01A 3 3 Out-of-frame Intra-chr q21.1 Tumor suppressor gene q21.1 67608 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCAN-NOSIP NCAN chr19 19345905 - NOSIP chr19 50063949 - Exonic hg19 LGG TCGA-TM-A7CF-02A 3 5 CDS-5'UTR Intra-chr p13.11 q13.33 Seq+ 67609 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCAN-NR2F6 NCAN chr19 19322873 - NR2F6 chr19 17351574 - Exonic hg19 BRCA TCGA-E9-A1RG-01A 47 17 5'UTR-CDS Intra-chr p13.11 p13.11 Transcription factor Seq+ 67610 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCAPD2-VWF NCAPD2 chr12 6603320 - VWF chr12 6059049 - Exonic hg19 LUAD TCGA-55-1596-01A 27 54 5'UTR-CDS Intra-chr p13.31 p13.31 Seq+ 67611 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCAPD3-KBTBD3 NCAPD3 chr11 134062584 - KBTBD3 chr11 105929836 - Exonic hg19 BLCA TCGA-CF-A8HY-01A 5 3 CDS-5'UTR Intra-chr q25 q22.3 Seq+ 67612 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCAPG2-IQCJ-SCHIP1 NCAPG2 chr7 158494513 - IQCJ-SCHIP1 chr3 159482232 + Exonic hg19 LUSC TCGA-43-6647-01A 17 8 Out-of-frame Inter-chr q36.3 q25.32 67613 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCAPH-KCNIP3 NCAPH chr2 97001586 - KCNIP3 chr2 96040044 + Exonic hg19 LUSC TCGA-90-7767-01A 5 14 In-Frame Intra-chr q11.2 q11.1 Transcription factor Seq+ 67614 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCEH1-FNDC3B NCEH1 chr3 172428637 - FNDC3B chr3 171944661 + Exonic hg19 LUSC TCGA-56-7580-01A 16 5 Out-of-frame Intra-chr q26.31 q26.31 67615 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCEH1-SPATA16 NCEH1 chr3 172428637 - SPATA16 chr3 172674614 - Exonic hg19 HNSC TCGA-CV-7430-01A 16 20 In-Frame Intra-chr q26.31 q26.31 Seq+ 67616 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCF2-PAPPA2 NCF2 chr1 183538277 - PAPPA2 chr1 176640106 + Exonic hg19 LIHC TCGA-2Y-A9HA-01A 12 10 In-Frame Intra-chr q25.3 q25.2 Seq+ 67617 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCK1-HEBP1 NCK1 chr3 136665137 - HEBP1 chr12 13128413 - Exonic hg19 HNSC TCGA-QK-A8ZB-01A 62 52 Out-of-frame Inter-chr q22.3 p13.1 Seq+ 67618 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCK1-PCCB NCK1 chr3 136581161 - PCCB chr3 136002679 + Exonic hg19 BLCA TCGA-4Z-AA7Q-01A 29 19 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 67619 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCK1-RAB6B NCK1 chr3 136581161 - RAB6B chr3 133560507 - Exonic hg19 BRCA TCGA-AO-A0J4-01A 4 5 5'UTR-CDS Intra-chr q22.3 q22.1 Seq+ 67620 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCK1-STAG1 NCK1 chr3 136664594 - STAG1 chr3 136240259 - Exonic hg19 HNSC TCGA-UF-A7JA-01A 33 24 In-Frame Intra-chr q22.3 q22.3 Seq+ 67621 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCK2-MRPS9 NCK2 chr2 106361595 - MRPS9 chr2 105705442 + Exonic hg19 STAD TCGA-VQ-A925-01A 5 73 5'UTR-CDS Intra-chr q12.2 q12.1 Seq+ 67622 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCK2-NUP93 NCK2 chr2 106471745 - NUP93 chr16 56782146 + Exonic hg19 MESO TCGA-ZN-A9VP-01A 95 59 CDS-5'UTR Inter-chr q12.2 q13 Seq+ 67623 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCK2-SFXN5 NCK2 chr2 106471745 - SFXN5 chr2 73198814 - Exonic hg19 BRCA TCGA-A8-A09I-01A 4 5 In-Frame Intra-chr q12.2 p13.2 Seq+ 67624 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCKAP1-LYPD6B NCKAP1 chr2 183888534 - LYPD6B chr2 149987397 + Exonic hg19 PRAD TCGA-J4-A83J-01A 29 41 CDS-5'UTR Intra-chr q32.1 q23.2 Seq+ 67625 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCKAP1-PARD3 NCKAP1 chr2 183888534 - PARD3 chr10 34985347 - Exonic hg19 HNSC TCGA-CN-4742-01A 85 53 In-Frame Inter-chr q32.1 p11.21 Seq+ 67626 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCKAP5-DYNC2H1 NCKAP5 chr2 133971288 - DYNC2H1 chr11 103306671 + Exonic hg19 LGG TCGA-FG-5963-01A 7 10 In-Frame Inter-chr q21.2 q22.3 Seq+ 67627 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCKAP5-DYNC2H1 NCKAP5 chr2 133971288 - DYNC2H1 chr11 103306671 + Exonic hg19 LGG TCGA-FG-5963-02A 10 11 In-Frame Inter-chr q21.2 q22.3 Seq+ 67628 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCKAP5-ERBB4 NCKAP5 chr2 133887550 - ERBB4 chr2 212812341 - Exonic hg19 LUSC TCGA-58-8391-01A 2 2 Out-of-frame Intra-chr q21.2 q34 Oncogene Tumor suppressor gene 67629 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCKAP5-MZT2A NCKAP5 chr2 134060609 - MZT2A chr2 132241791 - Exonic hg19 PRAD TCGA-KK-A59X-01A 13 15 Out-of-frame Intra-chr q21.2 q21.1 Seq+ 67630 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCKAP5-NMI NCKAP5 chr2 134060609 - NMI chr2 152139468 - Exonic hg19 KIRP TCGA-A4-7585-01A 2 1 CDS-5'UTR Intra-chr q21.2 q23.3 67631 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCKAP5-TMEM163 NCKAP5 chr2 134060609 - TMEM163 chr2 135223796 - Exonic hg19 HNSC TCGA-IQ-A6SH-01A 2 2 Out-of-frame Intra-chr q21.2 q21.3 67632 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCKAP5L-BCDIN3D NCKAP5L chr12 50222105 - BCDIN3D chr12 50232798 - Exonic hg19 ACC TCGA-OR-A5KX-01A 18 15 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 67633 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCKAP5L-PDE6H NCKAP5L chr12 50222105 - PDE6H chr12 15130906 + Exonic hg19 UCS TCGA-N5-A4RO-01A 2 1 5'UTR-5'UTR Intra-chr q13.12 p12.3 Seq+ 67634 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCKIPSD-IP6K2 NCKIPSD chr3 48715997 - IP6K2 chr3 48732854 - Exonic hg19 CESC TCGA-UC-A7PF-01A 5 2 Out-of-frame Intra-chr p21.31 p21.31 67635 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCKIPSD-SFMBT1 NCKIPSD chr3 48723070 - SFMBT1 chr3 52968917 - Exonic hg19 THYM TCGA-ZB-A969-01A 2 2 Out-of-frame Intra-chr p21.31 p21.1 Seq+ 67636 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCL-RBM25 NCL chr2 232319462 - RBM25 chr14 73572567 + Exonic hg19 LUSC TCGA-85-A50M-01A 2 1 3'UTR-CDS Inter-chr q37.1 q24.2 67637 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCL-RBM25 NCL chr2 232319462 - RBM25 chr14 73572567 + Exonic hg19 HNSC TCGA-CR-7370-01A 2 1 3'UTR-CDS Inter-chr q37.1 q24.2 67638 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCL-SQSTM1 NCL chr2 232319462 - SQSTM1 chr5 179250858 + Exonic hg19 LUAD TCGA-78-7542-01A 2 3 3'UTR-CDS Inter-chr q37.1 q35.3 67639 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCL-STAT6 NCL chr2 232319462 - STAT6 chr12 57496773 - Exonic hg19 PRAD TCGA-EJ-7123-01A 2 6 Out-of-frame Inter-chr q37.1 q13.3 Transcription factor 67640 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCLN-ACSBG2 NCLN chr19 3193426 - ACSBG2 chr19 6187294 + Exonic hg19 LUAD TCGA-75-5125-01A 12 15 In-Frame Intra-chr p13.3 p13.3 Seq+ 67641 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA1-ALK NCOA1 chr2 24985645 - ALK chr2 29940563 - Exonic hg19 SKCM TCGA-D3-A3CF-06A 5 1 Out-of-frame Intra-chr p23.3 Oncogene Transcription factor p23.1 TK:ALK Oncogene 67642 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA1-GOLGB1 NCOA1 chr2 24896332 - GOLGB1 chr3 121388202 - Exonic hg19 BRCA TCGA-OL-A5RW-01A 46 38 In-Frame Inter-chr p23.3 Oncogene Transcription factor q13.33 Seq+ 67643 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA1-LPIN1 NCOA1 chr2 24807429 - LPIN1 chr2 11881475 + Exonic hg19 KIRP TCGA-G7-6792-01A 10 1 Out-of-frame Intra-chr p23.3 Oncogene Transcription factor p25.1 Seq+ 67644 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA1-PSD2 NCOA1 chr2 24787299 - PSD2 chr5 139201478 + Exonic hg19 BRCA TCGA-BH-A0B3-01A 4 3 5'UTR-CDS Inter-chr p23.3 Oncogene Transcription factor q31.2 Seq+ 67645 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA1-UBXN2A NCOA1 chr2 24807429 - UBXN2A chr2 24181171 + Exonic hg19 LUSC TCGA-85-A4JB-01A 2 2 5'UTR-5'UTR Intra-chr p23.3 Oncogene Transcription factor p23.3 Seq+ 67646 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA1-UBXN2A NCOA1 chr2 24920667 - UBXN2A chr2 24222542 + Exonic hg19 SKCM TCGA-D3-A1Q6-06A 2 4 Out-of-frame Intra-chr p23.3 Oncogene Transcription factor p23.3 Seq+ 67647 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA2-ARFGEF1 NCOA2 chr8 71315935 - ARFGEF1 chr8 68214701 - Exonic hg19 BRCA TCGA-A8-A08T-01A 17 9 5'UTR-CDS Intra-chr q13.3 Oncogene Transcription factor q13.2 Seq+ 67648 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA2-EIF4EBP1 NCOA2 chr8 71315935 - EIF4EBP1 chr8 37914599 + Exonic hg19 PRAD TCGA-FC-A4JI-01A 51 38 5'UTR-CDS Intra-chr q13.3 Oncogene Transcription factor p11.23 Seq+ 67649 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA2-FAM150A NCOA2 chr8 71208979 - FAM150A chr8 53455005 - Exonic hg19 BLCA TCGA-GV-A6ZA-01A 11 16 5'UTR-CDS Intra-chr q13.3 Oncogene Transcription factor Seq+ 67650 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA2-LEPROTL1 NCOA2 chr8 71315935 - LEPROTL1 chr8 29959414 + Exonic hg19 LUAD TCGA-53-7624-01A 14 4 5'UTR-CDS Intra-chr q13.3 Oncogene Transcription factor p12 Seq+ 67651 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA2-NCALD NCOA2 chr8 71126138 - NCALD chr8 102731876 - Exonic hg19 BRCA TCGA-BH-A203-01A 3 4 CDS-5'UTR Intra-chr q13.3 Oncogene Transcription factor q22.3 Seq+ 67652 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA2-SGSM3 NCOA2 chr8 71315935 - SGSM3 chr22 40796700 + Exonic hg19 PRAD TCGA-XK-AAIV-01A 55 36 5'UTR-5'UTR Inter-chr q13.3 Oncogene Transcription factor q13.1 Seq+ 67653 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA2-ST18 NCOA2 chr8 71208979 - ST18 chr8 53159224 - Exonic hg19 SKCM TCGA-GN-A26C-01A 4 3 5'UTR-5'UTR Intra-chr q13.3 Oncogene Transcription factor q11.23 Transcription factor Seq+ 67654 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA2-XKR9 NCOA2 chr8 71033537 - XKR9 chr8 71587053 + Exonic hg19 LUAD TCGA-91-7771-01A 2 1 CDS-5'UTR Intra-chr q13.3 Oncogene Transcription factor q13.3 67655 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA3-ARHGAP26 NCOA3 chr20 46256767 - ARHGAP26 chr5 142601923 + Exonic hg19 CESC TCGA-LP-A5U3-01A 45 31 In-Frame Inter-chr q13.12 Transcription factor q31.3 Seq+ 67656 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA3-DUSP15 NCOA3 chr20 46130763 - DUSP15 chr20 30454956 - Exonic hg19 BLCA TCGA-DK-A3IS-01A 5 2 5'UTR-5'UTR Intra-chr q13.12 Transcription factor q11.21 Seq+ 67657 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA3-EYA2 NCOA3 chr20 46130763 - EYA2 chr20 45801355 + Exonic hg19 OV TCGA-23-1030-01A 6 3 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.12 Seq+ 67658 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA3-EYA2 NCOA3 chr20 46271128 - EYA2 chr20 45700824 + Exonic hg19 LUSC TCGA-37-4133-01A 6 2 Out-of-frame Intra-chr q13.12 Transcription factor q13.12 Seq+ 67659 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA3-EYA2 NCOA3 chr20 46130763 - EYA2 chr20 45618640 + Exonic hg19 LUAD TCGA-55-7727-01A 4 5 5'UTR-5'UTR Intra-chr q13.12 Transcription factor q13.12 Seq+ 67660 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA3-EYA2 NCOA3 chr20 46212005 - EYA2 chr20 45618640 + Exonic hg19 UCEC TCGA-A5-A1OH-01A 4 1 5'UTR-5'UTR Intra-chr q13.12 Transcription factor q13.12 Seq+ 67661 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA3-EYA2 NCOA3 chr20 46254225 - EYA2 chr20 45700824 + Exonic hg19 UCS TCGA-N5-A4RO-01A 14 4 Out-of-frame Intra-chr q13.12 Transcription factor q13.12 Seq+ 67662 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA3-GGT7 NCOA3 chr20 46130763 - GGT7 chr20 33451351 - Exonic hg19 LUSC TCGA-6A-AB49-01A 10 2 5'UTR-CDS Intra-chr q13.12 Transcription factor q11.22 Seq+ 67663 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA3-KCTD20 NCOA3 chr20 46130763 - KCTD20 chr6 36437829 + Exonic hg19 UCEC TCGA-B5-A3FB-01A 14 8 5'UTR-5'UTR Inter-chr q13.12 Transcription factor p21.31 Seq+ 67664 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA3-MLLT6 NCOA3 chr20 46130763 - MLLT6 chr17 36865426 + Exonic hg19 UCEC TCGA-PG-A915-01A 15 10 5'UTR-CDS Inter-chr q13.12 Transcription factor q12 Seq+ 67665 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA3-PADI1 NCOA3 chr20 46130763 - PADI1 chr1 17548785 + Exonic hg19 UCEC TCGA-AX-A2H4-01A 13 4 5'UTR-CDS Inter-chr q13.12 Transcription factor 67666 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA3-PTPRT NCOA3 chr20 46130763 - PTPRT chr20 41101202 - Exonic hg19 SARC TCGA-DX-A1KU-01A 2 3 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.11 Oncogene Tumor suppressor gene Seq+ 67667 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA3-SGK2 NCOA3 chr20 46212005 - SGK2 chr20 42195113 + Exonic hg19 LUAD TCGA-75-5146-01A 52 25 5'UTR-5'UTR Intra-chr q13.12 Transcription factor q13.12 AGC:SGK Seq+ 67668 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA3-SULF2 NCOA3 chr20 46276110 - SULF2 chr20 46331414 - Exonic hg19 UCS TCGA-N6-A4VE-01A 5 3 Out-of-frame Intra-chr q13.12 Transcription factor q13.12 67669 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA4-ARHGAP44 NCOA4 chr10 51565296 - ARHGAP44 chr17 12862034 + Exonic hg19 PRAD TCGA-V1-A8ML-01A 9 2 5'UTR-CDS Inter-chr q11.22 Oncogene Tumor suppressor gene p12 Seq+ 67670 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA4-C10orf25 NCOA4 chr10 51565296 - C10orf25 chr10 45495864 - Exonic hg19 PRAD TCGA-EJ-5497-01A 5 7 5'UTR-CDS Intra-chr q11.22 Oncogene Tumor suppressor gene q11.21 Seq+ 67671 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA4-MSMB NCOA4 chr10 51585599 - MSMB chr10 51555731 + Exonic hg19 TGCT TCGA-2G-AAFV-01A 28 18 In-Frame Intra-chr q11.22 Oncogene Tumor suppressor gene q11.22 Tumor suppressor gene Seq+ 67672 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA4-MSMB NCOA4 chr10 51581378 - MSMB chr10 51555731 + Exonic hg19 LUSC TCGA-33-AASL-01A 2 2 In-Frame Intra-chr q11.22 Oncogene Tumor suppressor gene q11.22 Tumor suppressor gene Seq+ 67673 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA4-MSMB NCOA4 chr10 51565296 - MSMB chr10 51555731 + Exonic hg19 BLCA TCGA-DK-A6B2-01A 69 66 5'UTR-CDS Intra-chr q11.22 Oncogene Tumor suppressor gene q11.22 Tumor suppressor gene Seq+ 67674 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA4-OR13A1 NCOA4 chr10 51565296 - OR13A1 chr10 45803256 - Exonic hg19 BRCA TCGA-B6-A0X7-01A 8 6 5'UTR-5'UTR Intra-chr q11.22 Oncogene Tumor suppressor gene Seq+ 67675 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA4-RET NCOA4 chr10 51582939 - RET chr10 43612032 + Exonic hg19 THCA TCGA-CE-A482-01A 123 46 In-Frame Intra-chr q11.22 Oncogene Tumor suppressor gene q11.21 TK:Ret Oncogene KB Pub Seq+ 67676 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA4-RET NCOA4 chr10 51582939 - RET chr10 43612032 + Exonic hg19 THCA TCGA-DE-A3KN-01A 106 42 In-Frame Intra-chr q11.22 Oncogene Tumor suppressor gene q11.21 TK:Ret Oncogene KB Pub Seq+ 67677 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA4-RET NCOA4 chr10 51582939 - RET chr10 43612032 + Exonic hg19 THCA TCGA-EL-A3H3-01A 63 35 In-Frame Intra-chr q11.22 Oncogene Tumor suppressor gene q11.21 TK:Ret Oncogene KB Pub Seq+ 67678 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA4-RET NCOA4 chr10 51582939 - RET chr10 43612032 + Exonic hg19 THCA TCGA-EM-A2CU-01A 104 34 In-Frame Intra-chr q11.22 Oncogene Tumor suppressor gene q11.21 TK:Ret Oncogene KB Pub Seq+ 67679 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA4-RSU1 NCOA4 chr10 51565296 - RSU1 chr10 16635495 - Exonic hg19 CHOL TCGA-W5-AA2U-01A 43 26 5'UTR-CDS Intra-chr q11.22 Oncogene Tumor suppressor gene p13 Seq+ 67680 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA4-SRSF7 NCOA4 chr10 51565296 - SRSF7 chr2 38977336 - Exonic hg19 PRAD TCGA-Y6-A9XI-01A 56 31 5'UTR-CDS Inter-chr q11.22 Oncogene Tumor suppressor gene p22.1 Seq+ 67681 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA5-CDH4 NCOA5 chr20 44708026 - CDH4 chr20 60318619 + Exonic hg19 BRCA TCGA-A8-A091-01A 2 9 Out-of-frame Intra-chr q13.12 Tumor suppressor gene q13.33 Tumor suppressor gene Seq+ 67682 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA6-GGT7 NCOA6 chr20 33413275 - GGT7 chr20 33440341 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 2 49 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 67683 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA6-GSS NCOA6 chr20 33413275 - GSS chr20 33539663 - Exonic hg19 BRCA TCGA-A2-A3XS-01A 7 5 5'UTR-5'UTR Intra-chr q11.22 q11.22 Seq+ 67684 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA6-GSS NCOA6 chr20 33413275 - GSS chr20 33539663 - Exonic hg19 ACC TCGA-OR-A5LO-01A 9 3 5'UTR-5'UTR Intra-chr q11.22 q11.22 Seq+ 67685 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA6-LSM1 NCOA6 chr20 33356267 - LSM1 chr8 38029551 - Exonic hg19 SARC TCGA-DX-A3LS-01A 124 101 In-Frame Inter-chr q11.22 p11.23 Seq+ 67686 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA6-RALGAPA2 NCOA6 chr20 33334611 - RALGAPA2 chr20 20570009 - Exonic hg19 BRCA TCGA-EW-A1PF-01A 12 5 In-Frame Intra-chr q11.22 p11.23 Seq+ 67687 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA6-SLC10A1 NCOA6 chr20 33413275 - SLC10A1 chr14 70253024 - Exonic hg19 OV TCGA-61-1738-01A 2 13 5'UTR-CDS Inter-chr q11.22 q24.1 Seq+ 67688 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA6-TCFL5 NCOA6 chr20 33324494 - TCFL5 chr20 61473449 - Exonic hg19 LUAD TCGA-05-4244-01A 5 2 Out-of-frame Intra-chr q11.22 q13.33 Transcription factor Seq+ 67689 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA6-TRPC4AP NCOA6 chr20 33413275 - TRPC4AP chr20 33637797 - Exonic hg19 ESCA TCGA-L5-A4OQ-01A 5 24 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 67690 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOA7-NKAIN2 NCOA7 chr6 126112213 - NKAIN2 chr6 125112485 + Exonic hg19 ESCA TCGA-L5-A891-01A 5 12 5'UTR-CDS Intra-chr q22.31 q22.31 Seq+ 67691 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR1-ACACA NCOR1 chr17 15960828 - ACACA chr17 35627752 - Exonic hg19 BRCA TCGA-E2-A1IN-01A 2 2 Out-of-frame Intra-chr p11.2 Oncogene 67692 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR1-ACER3 NCOR1 chr17 15995177 - ACER3 chr11 76637601 + Exonic hg19 BRCA TCGA-AR-A2LJ-01A 25 7 In-Frame Inter-chr p11.2 Oncogene q13.5 Seq+ 67693 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR1-DPM1 NCOR1 chr17 16055260 - DPM1 chr20 49571822 - Exonic hg19 BRCA TCGA-BH-A0B2-01A 14 14 In-Frame Inter-chr p11.2 Oncogene q13.13 Seq+ 67694 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR1-FBXO3 NCOR1 chr17 15960828 - FBXO3 chr11 33792376 - Exonic hg19 BRCA TCGA-D8-A1JD-01A 46 54 In-Frame Inter-chr p11.2 Oncogene p13 Seq+ 67695 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR1-HIC1 NCOR1 chr17 15973479 - HIC1 chr17 1959965 + Exonic hg19 CHOL TCGA-W5-AA31-01A 9 6 In-Frame Intra-chr p11.2 Oncogene p13.3 Tumor suppressor gene Transcription factor Seq+ 67696 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR1-PIGL NCOR1 chr17 16062074 - PIGL chr17 16203202 + Exonic hg19 READ TCGA-F5-6864-01A 7 1 Out-of-frame Intra-chr p11.2 Oncogene p11.2 67697 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR1-PRR11 NCOR1 chr17 16089868 - PRR11 chr17 57247109 + Exonic hg19 UCS TCGA-N8-A4PQ-01A 4 1 CDS-5'UTR Intra-chr p11.2 Oncogene q22 Seq+ 67698 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR1-RHOU NCOR1 chr17 16097776 - RHOU chr1 228873420 + Exonic hg19 THCA TCGA-EM-A2OX-01A 20 32 Out-of-frame Inter-chr p11.2 Oncogene q42.13 Seq+ 67699 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR1-RSF1 NCOR1 chr17 16118676 - RSF1 chr11 77396204 - Exonic hg19 BRCA TCGA-AR-A2LJ-01A 23 14 5'UTR-CDS Inter-chr p11.2 Oncogene q14.1 Seq+ 67700 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR1-TFDP2 NCOR1 chr17 15960828 - TFDP2 chr3 141693033 - Exonic hg19 PRAD TCGA-V1-A9ZI-01A 2 6 Out-of-frame Inter-chr p11.2 Oncogene q23 Transcription factor Seq+ 67701 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR1-ZNF287 NCOR1 chr17 16089868 - ZNF287 chr17 16456740 - Exonic hg19 BRCA TCGA-A8-A08J-01A 3 4 Out-of-frame Intra-chr p11.2 Oncogene p11.2 Transcription factor Seq+ 67702 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR2-DDX27 NCOR2 chr12 124808962 - DDX27 chr20 47849303 + Exonic hg19 HNSC TCGA-CR-5243-01A 2 3 Out-of-frame Inter-chr q24.31 q13.13 67703 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR2-DHX37 NCOR2 chr12 124950719 - DHX37 chr12 125450358 - Exonic hg19 GBM TCGA-06-0878-01A 11 12 In-Frame Intra-chr q24.31 q24.31 Seq+ 67704 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR2-DHX37 NCOR2 chr12 124970987 - DHX37 chr12 125470811 - Exonic hg19 OV TCGA-13-A5FT-01A 3 8 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 67705 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR2-DHX37 NCOR2 chr12 124846672 - DHX37 chr12 125435350 - Exonic hg19 STAD TCGA-CG-4449-01A 4 7 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 67706 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR2-FMR1NB NCOR2 chr12 124882665 - FMR1NB chrX 147084721 + Exonic hg19 KIRC TCGA-B0-4699-01A 2 6 In-Frame Inter-chr q24.31 q27.3 Seq+ 67707 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR2-GATA4 NCOR2 chr12 124862783 - GATA4 chr8 11606428 + Exonic hg19 LGG TCGA-HT-7854-01A 666 396 In-Frame Inter-chr q24.31 p23.1 Tumor suppressor gene Transcription factor Seq+ 67708 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR2-ITGB5 NCOR2 chr12 125002686 - ITGB5 chr3 124528003 - Exonic hg19 BRCA TCGA-AC-A3EH-01A 18 16 5'UTR-CDS Inter-chr q24.31 q21.2 Seq+ 67709 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR2-MORN3 NCOR2 chr12 124979693 - MORN3 chr12 122097254 - Exonic hg19 DLBC TCGA-FA-A7DS-01A 12 7 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 67710 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR2-NUP37 NCOR2 chr12 124904503 - NUP37 chr12 102512361 - Exonic hg19 SARC TCGA-DX-A3LS-01A 11 4 CDS-5'UTR Intra-chr q24.31 q23.2 Seq+ 67711 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR2-PGC NCOR2 chr12 124809926 - PGC chr6 41715135 - Exonic hg19 LUAD TCGA-97-8174-01A 2 1 Out-of-frame Inter-chr q24.31 p21.1 67712 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR2-PIP4K2B NCOR2 chr12 125051854 - PIP4K2B chr17 36943173 - Exonic hg19 OV TCGA-13-A5FT-01A 10 63 5'UTR-CDS Inter-chr q24.31 q12 Seq+ 67713 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR2-S100A4 NCOR2 chr12 124831139 - S100A4 chr1 153518278 - Exonic hg19 SKCM TCGA-D3-A2J8-06A 2 1 Out-of-frame Inter-chr q24.31 q21.3 67714 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 125020111 - SCARB1 chr12 125271049 - Exonic hg19 ESCA TCGA-2H-A9GN-01A 20 100 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 67715 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 125020111 - SCARB1 chr12 125284788 - Exonic hg19 LUAD TCGA-55-8301-01A 4 10 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 67716 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 125051854 - SCARB1 chr12 125302253 - Exonic hg19 LUAD TCGA-78-7152-01A 18 36 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 67717 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 124968142 - SCARB1 chr12 125263132 - Exonic hg19 LAML TCGA-AB-2848-03A 34 7 In-Frame Intra-chr q24.31 q24.31 Seq+ 67718 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 124904503 - SCARB1 chr12 125302253 - Exonic hg19 BRCA TCGA-B6-A0X1-01A 7 14 In-Frame Intra-chr q24.31 q24.31 Seq+ 67719 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 125020111 - SCARB1 chr12 125302253 - Exonic hg19 STAD TCGA-CD-A4MH-01A 14 102 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 67720 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 125051854 - SCARB1 chr12 125279814 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 34 36 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 67721 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 125020111 - SCARB1 chr12 125302253 - Exonic hg19 ESCA TCGA-L5-A43M-01A 3 190 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 67722 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 125051854 - SCARB1 chr12 125302253 - Exonic hg19 ESCA TCGA-L5-A891-01A 153 467 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 67723 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 124882665 - SCARB1 chr12 125263132 - Exonic hg19 ACC TCGA-OR-A5KY-01A 277 139 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 67724 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 124904503 - SCARB1 chr12 125302253 - Exonic hg19 SARC TCGA-QQ-A8VH-01A 25 57 In-Frame Intra-chr q24.31 q24.31 Seq+ 67725 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 124979693 - SCARB1 chr12 125302253 - Exonic hg19 STAD TCGA-VQ-A91Y-01A 5 130 In-Frame Intra-chr q24.31 q24.31 Seq+ 67726 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCOR2-TMEM132D NCOR2 chr12 124885047 - TMEM132D chr12 130015750 - Exonic hg19 LGG TCGA-DU-8167-01A 3 5 Out-of-frame Intra-chr q24.31 q24.33 Seq+ 67727 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCS1-GPR107 NCS1 chr9 132935006 - GPR107 chr9 132889762 + Exonic hg19 ACC TCGA-OR-A5J9-01A 6 6 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 67728 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCSTN-ATP1A4 NCSTN chr1 160314616 - ATP1A4 chr1 160145882 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 14 5 In-Frame Intra-chr q23.2 q23.2 Seq+ 67729 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCSTN-SPRR2G NCSTN chr1 160324080 - SPRR2G chr1 153122607 - Exonic hg19 LUAD TCGA-97-A4M3-01A 753 629 CDS-5'UTR Intra-chr q23.2 q21.3 Seq+ 67730 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NCSTN-SREBF1 NCSTN chr1 160328736 - SREBF1 chr17 17726944 - Exonic hg19 PRAD TCGA-HC-7213-01A 2 3 Out-of-frame Inter-chr q23.2 p11.2 Transcription factor 67731 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDC80-PPP4R1 NDC80 chr18 2579028 - PPP4R1 chr18 9562073 - Exonic hg19 BLCA TCGA-G2-AA3D-01A 14 8 In-Frame Intra-chr p11.32 p11.22 Seq+ 67732 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDC80-TTC39C NDC80 chr18 2610860 - TTC39C chr18 21703798 + Exonic hg19 LUAD TCGA-86-8358-01A 15 12 Out-of-frame Intra-chr p11.32 q11.2 Seq+ 67733 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDEL1-CHD3 NDEL1 chr17 8352004 - CHD3 chr17 7813746 + Exonic hg19 LGG TCGA-FG-A60L-01A 22 14 In-Frame Intra-chr p13.1 p13.1 Seq+ 67734 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDEL1-DHX30 NDEL1 chr17 8352004 - DHX30 chr3 47868837 + Exonic hg19 PRAD TCGA-J4-A67K-01A 3 3 In-Frame Inter-chr p13.1 p21.31 Seq+ 67735 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDEL1-WSCD1 NDEL1 chr17 8363478 - WSCD1 chr17 5998422 + Exonic hg19 KIRC TCGA-B0-4694-01A 3 1 Out-of-frame Intra-chr p13.1 p13.2 67736 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDFIP1-NDUFAF2 NDFIP1 chr5 141524241 - NDUFAF2 chr5 60448531 + Exonic hg19 BRCA TCGA-A7-A56D-01A 2 17 3'UTR-CDS Intra-chr q31.3 q12.1 Seq+ 67737 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDRG1-CLCN3 NDRG1 chr8 134249419 - CLCN3 chr4 170623929 + Exonic hg19 PRAD TCGA-HC-7736-01A 2 4 Out-of-frame Inter-chr q24.22 Tumor suppressor gene q33 67738 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDRG1-DACT3 NDRG1 chr8 134292475 - DACT3 chr19 47156332 - Exonic hg19 PRAD TCGA-EJ-5498-01A 105 28 In-Frame Inter-chr q24.22 Tumor suppressor gene q13.32 Seq+ 67739 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDRG1-LARP1 NDRG1 chr8 134249419 - LARP1 chr5 154188019 + Exonic hg19 CESC TCGA-JW-A5VL-01A 2 2 3'UTR-CDS Inter-chr q24.22 Tumor suppressor gene q33.2 67740 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDRG1-MYC NDRG1 chr8 134292475 - MYC chr8 128750497 + Exonic hg19 PRAD TCGA-XK-AAIV-01A 67 58 In-Frame Intra-chr q24.22 Tumor suppressor gene q24.21 Oncogene Transcription factor Seq+ 67741 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDRG1-PLEKHA5 NDRG1 chr8 134249419 - PLEKHA5 chr12 19441012 + Exonic hg19 KIRC TCGA-CJ-4639-01A 2 3 Out-of-frame Inter-chr q24.22 Tumor suppressor gene p12.3 67742 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDRG1-RABEP1 NDRG1 chr8 134249419 - RABEP1 chr17 5283828 + Exonic hg19 PRAD TCGA-HC-7077-01A 2 5 Out-of-frame Inter-chr q24.22 Tumor suppressor gene p13.2 67743 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDRG1-SNW1 NDRG1 chr8 134249419 - SNW1 chr14 78189203 - Exonic hg19 BLCA TCGA-FD-A3SR-01A 2 26 Out-of-frame Inter-chr q24.22 Tumor suppressor gene q24.3 67744 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDRG1-ST3GAL1 NDRG1 chr8 134296492 - ST3GAL1 chr8 134488843 - Exonic hg19 KIRC TCGA-B0-5400-01A 45 25 CDS-5'UTR Intra-chr q24.22 Tumor suppressor gene q24.22 Seq+ 67745 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDRG1-ST3GAL1 NDRG1 chr8 134292475 - ST3GAL1 chr8 134475702 - Exonic hg19 CESC TCGA-DS-A1OC-01A 50 68 Out-of-frame Intra-chr q24.22 Tumor suppressor gene q24.22 Seq+ 67746 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDRG1-STAT6 NDRG1 chr8 134249419 - STAT6 chr12 57496773 - Exonic hg19 CESC TCGA-JW-A5VJ-01A 2 52 Out-of-frame Inter-chr q24.22 Tumor suppressor gene q13.3 Transcription factor 67747 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDRG2-KIF3A NDRG2 chr14 21484932 - KIF3A chr5 132035266 - Exonic hg19 LGG TCGA-FG-8185-01A 2 118 Out-of-frame Inter-chr q11.2 Tumor suppressor gene q31.1 67748 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDRG2-RABEP1 NDRG2 chr14 21484932 - RABEP1 chr17 5283828 + Exonic hg19 LGG TCGA-E1-5319-01A 2 48 Out-of-frame Inter-chr q11.2 Tumor suppressor gene p13.2 67749 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDRG2-SEC63 NDRG2 chr14 21484932 - SEC63 chr6 108214782 - Exonic hg19 LGG TCGA-HT-7478-01A 2 18 Out-of-frame Inter-chr q11.2 Tumor suppressor gene q21 67750 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDRG3-CPLX1 NDRG3 chr20 35374448 - CPLX1 chr4 786396 - Exonic hg19 HNSC TCGA-C9-A47Z-01A 4 8 5'UTR-CDS Inter-chr q11.23 p16.3 Seq+ 67751 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDST1-FAM114A2 NDST1 chr5 149865566 - FAM114A2 chr5 153414527 - Exonic hg19 SKCM TCGA-EE-A2GJ-06A 43 7 5'UTR-5'UTR Intra-chr q33.1 q33.2 Seq+ 67752 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDST1-TCOF1 NDST1 chr5 149901329 - TCOF1 chr5 149753737 + Exonic hg19 LUSC TCGA-33-4566-01A 8 1 In-Frame Intra-chr q33.1 q32 67753 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDST1-TCOF1 NDST1 chr5 149865566 - TCOF1 chr5 149769450 + Exonic hg19 LIHC TCGA-DD-A11C-01A 31 4 5'UTR-CDS Intra-chr q33.1 q32 67754 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDST2-KIAA0913 NDST2 chr10 75562432 - KIAA0913 chr10 75559769 + Exonic hg19 BRCA TCGA-E9-A22B-01A 6 8 In-Frame Intra-chr q22.2 67755 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDUFA10-ANXA4 NDUFA10 chr2 240929491 - ANXA4 chr2 70008652 + Exonic hg19 SKCM TCGA-HR-A2OH-01A 2 2 CDS-5'UTR Intra-chr p13.3 67756 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDUFA10-ANXA4 NDUFA10 chr2 240929491 - ANXA4 chr2 70008652 + Exonic hg19 SKCM TCGA-HR-A2OH-06A 2 2 CDS-5'UTR Intra-chr p13.3 67757 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDUFA10-SGPP2 NDUFA10 chr2 240929491 - SGPP2 chr2 223386486 + Exonic hg19 LUSC TCGA-39-5035-01A 30 14 In-Frame Intra-chr q36.1 Seq+ 67758 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDUFA12-NUP107 NDUFA12 chr12 95396515 - NUP107 chr12 69082742 + Exonic hg19 SARC TCGA-3B-A9HL-01A 13 10 Out-of-frame Intra-chr q22 q15 Seq+ 67759 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDUFA4L2-AVIL NDUFA4L2 chr12 57630376 - AVIL chr12 58197174 - Exonic hg19 GBM TCGA-06-0129-01A 3 2 In-Frame Intra-chr q13.3 q14.1 Seq+ 67760 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDUFA7-PRKCG NDUFA7 chr19 8381380 - PRKCG chr19 54406327 + Exonic hg19 HNSC TCGA-D6-6515-01A 43 36 Out-of-frame Intra-chr p13.2 q13.42 Seq+ 67761 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDUFA7-SH2D3A NDUFA7 chr19 8381380 - SH2D3A chr19 6755326 - Exonic hg19 BRCA TCGA-BH-A0BR-01A 8 5 Out-of-frame Intra-chr p13.2 p13.3 Seq+ 67762 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDUFA9-C12orf4 NDUFA9 chr12 4771801 - C12orf4 chr12 4600400 - Exonic hg19 SARC TCGA-DX-A3U5-01A 16 8 Out-of-frame Intra-chr p13.32 p13.32 Seq+ 67763 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDUFAF2-ANKRD31 NDUFAF2 chr5 60241209 - ANKRD31 chr5 74380199 - Exonic hg19 BRCA TCGA-AO-A0JD-01A 3 6 Out-of-frame Intra-chr q12.1 q13.3 Seq+ 67764 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDUFB9-CSMD3 NDUFB9 chr8 125555520 - CSMD3 chr8 114327022 - Exonic hg19 SARC TCGA-DX-A3M1-01A 5 7 Out-of-frame Intra-chr q24.13 q23.3 Oncogene Seq+ 67765 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDUFB9-TDRKH NDUFB9 chr8 125551528 - TDRKH chr1 151755525 - Exonic hg19 BRCA TCGA-AC-A6IX-01A 267 163 CDS-5'UTR Inter-chr q24.13 q21.3 Seq+ 67766 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDUFB9-TDRKH NDUFB9 chr8 125551528 - TDRKH chr1 151755525 - Exonic hg19 BRCA TCGA-AC-A6IX-06A 430 233 CDS-5'UTR Inter-chr q24.13 q21.3 Seq+ 67767 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDUFS2-SLC24A2 NDUFS2 chr1 161172270 - SLC24A2 chr9 19597277 - Exonic hg19 SARC TCGA-FX-A2QS-01A 27 10 Out-of-frame Inter-chr q23.3 p22.1 Seq+ 67768 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDUFS3-ERO1LB NDUFS3 chr11 47604020 - ERO1LB chr1 236381876 - Exonic hg19 PRAD TCGA-EJ-5527-01A 25 31 Out-of-frame Inter-chr p11.2 Seq+ 67769 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDUFS4-EXTL3 NDUFS4 chr5 52899360 - EXTL3 chr8 28595036 + Exonic hg19 LUSC TCGA-43-5668-01A 11 9 Out-of-frame Inter-chr q11.2 p21.1 Tumor suppressor gene Seq+ 67770 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDUFS4-GZMA NDUFS4 chr5 52954454 - GZMA chr5 54401302 + Exonic hg19 CESC TCGA-VS-A8EI-01A 6 4 In-Frame Intra-chr q11.2 q11.2 Seq+ 67771 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDUFS4-TMPRSS2 NDUFS4 chr5 52954454 - TMPRSS2 chr21 42838080 - Exonic hg19 KIRP TCGA-B9-A5W9-01A 32 10 Out-of-frame Inter-chr q11.2 q22.3 Seq+ 67772 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDUFS4-UBE2D2 NDUFS4 chr5 52856590 - UBE2D2 chr5 138979957 + Exonic hg19 LUAD TCGA-93-A4JQ-01A 8 3 Out-of-frame Intra-chr q11.2 q31.2 Seq+ 67773 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDUFS7-STK11 NDUFS7 chr19 1388592 - STK11 chr19 1222984 + Exonic hg19 UCEC TCGA-B5-A3S1-01A 9 7 In-Frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Seq+ 67774 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NDUFV2-CHST9 NDUFV2 chr18 9117901 - CHST9 chr18 24524330 - Exonic hg19 LUAD TCGA-86-8075-01A 9 26 Out-of-frame Intra-chr p11.22 q11.2 Seq+ 67775 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEBL-C10orf140 NEBL chr10 21461312 - C10orf140 chr10 21812800 - Exonic hg19 BRCA TCGA-A7-A13D-01B 2 1 CDS-5'UTR Intra-chr p12.31 67776 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEBL-C10orf140 NEBL chr10 21461312 - C10orf140 chr10 21812800 - Exonic hg19 BRCA TCGA-AQ-A54N-01A 11 1 CDS-5'UTR Intra-chr p12.31 67777 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEBL-CAMK1D NEBL chr10 21461312 - CAMK1D chr10 12595224 + Exonic hg19 BLCA TCGA-XF-A8HD-01A 5 3 In-Frame Intra-chr p12.31 p13 Seq+ 67778 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEBL-DNAJC1 NEBL chr10 21177026 - DNAJC1 chr10 22055238 - Exonic hg19 BRCA TCGA-AR-A1AH-01A 6 7 In-Frame Intra-chr p12.31 p12.31 Seq+ 67779 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEBL-FBXO11 NEBL chr10 21169723 - FBXO11 chr2 48066908 - Exonic hg19 BRCA TCGA-A7-A13D-01B 13 16 Out-of-frame Inter-chr p12.31 p16.3 Seq+ 67780 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEBL-PRL NEBL chr10 21101698 - PRL chr6 22292874 - Exonic hg19 BLCA TCGA-GC-A3RB-01A 4 1 Out-of-frame Inter-chr p12.31 p22.3 67781 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEBL-RP11-383H13.1 NEBL chr10 21309046 - RP11-383H13.1 chr8 72964774 + Exonic hg19 LUAD TCGA-50-5051-01A 4 1 Out-of-frame Inter-chr p12.31 67782 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEBL-TMEM26 NEBL chr10 21309046 - TMEM26 chr10 63173293 - Exonic hg19 BRCA TCGA-A1-A0SK-01A 7 3 Out-of-frame Intra-chr p12.31 q21.2 Seq+ 67783 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NECAB3-ARHGAP40 NECAB3 chr20 32257181 - ARHGAP40 chr20 37252002 + Exonic hg19 BRCA TCGA-A7-A6VY-01A 7 4 Out-of-frame Intra-chr q11.22 q11.23 Seq+ 67784 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NECAB3-PXMP4 NECAB3 chr20 32257181 - PXMP4 chr20 32302542 - Exonic hg19 LIHC TCGA-CC-5263-01A 22 19 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 67785 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NECAP1-ANK1 NECAP1 chr12 8242895 - ANK1 chr8 41529944 - Exonic hg19 BLCA TCGA-BT-A20W-01A 4 2 In-Frame Inter-chr p13.31 p11.21 67786 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NECAP2-EPHA2 NECAP2 chr1 16775696 - EPHA2 chr1 16456914 - Exonic hg19 OV TCGA-25-2400-01A 2 10 In-Frame Intra-chr p36.13 p36.13 Tumor suppressor gene Seq+ 67787 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEDD1-GPHN NEDD1 chr12 97301078 - GPHN chr14 67431908 + Exonic hg19 SARC TCGA-DX-AB2O-01A 2 3 5'UTR-CDS Inter-chr q23.1 q23.3 Seq+ 67788 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEDD1-GRIP1 NEDD1 chr12 97306595 - GRIP1 chr12 66826408 - Exonic hg19 SARC TCGA-3B-A9HL-01A 2 2 Out-of-frame Intra-chr q23.1 q14.3 67789 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEDD1-PPFIA2 NEDD1 chr12 97306595 - PPFIA2 chr12 82148002 - Exonic hg19 SARC TCGA-3B-A9HL-01A 7 5 5'UTR-5'UTR Intra-chr q23.1 q21.31 Seq+ 67790 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEDD1-TMTC2 NEDD1 chr12 97313903 - TMTC2 chr12 83289597 + Exonic hg19 SARC TCGA-3B-A9HS-01A 7 5 In-Frame Intra-chr q23.1 q21.31 Seq+ 67791 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEDD1-TMTC2 NEDD1 chr12 97331171 - TMTC2 chr12 83358803 + Exonic hg19 SARC TCGA-DX-A3M1-01A 123 89 Out-of-frame Intra-chr q23.1 q21.31 Seq+ 67792 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEDD4-ADAMTSL3 NEDD4 chr15 56243574 - ADAMTSL3 chr15 84373141 + Exonic hg19 BRCA TCGA-AO-A03P-01A 3 1 In-Frame Intra-chr q21.3 Tumor suppressor gene q25.2 67793 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEDD4-GABRA5 NEDD4 chr15 56285709 - GABRA5 chr15 27113876 + Exonic hg19 BLCA TCGA-GD-A2C5-01A 8 6 CDS-5'UTR Intra-chr q21.3 Tumor suppressor gene q12 Seq+ 67794 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEDD4-RFX7 NEDD4 chr15 56258671 - RFX7 chr15 56379707 - Exonic hg19 BRCA TCGA-AN-A0FW-01A 3 1 CDS-3'UTR Intra-chr q21.3 Tumor suppressor gene q21.3 Transcription factor Seq+ 67795 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEDD4L-ALPK2 NEDD4L chr18 55711940 - ALPK2 chr18 56196470 - Exonic hg19 STAD TCGA-VQ-A8PD-01A 3 15 Out-of-frame Intra-chr q21.31 Tumor suppressor gene q21.32 Seq+ 67796 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEDD4L-BCL2 NEDD4L chr18 55833093 - BCL2 chr18 60795992 - Exonic hg19 BRCA TCGA-GM-A2DL-01A 6 1 Out-of-frame Intra-chr q21.31 Tumor suppressor gene q21.33 Oncogene 67797 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEDD4L-CDH19 NEDD4L chr18 55833093 - CDH19 chr18 64239553 - Exonic hg19 HNSC TCGA-CN-5359-01A 15 8 5'UTR-5'UTR Intra-chr q21.31 Tumor suppressor gene q22.1 Seq+ 67798 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEDD4L-HYI NEDD4L chr18 55919286 - HYI chr1 43917990 - Exonic hg19 BLCA TCGA-BT-A20R-01A 6 5 Out-of-frame Inter-chr q21.31 Tumor suppressor gene p34.2 Seq+ 67799 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEDD4L-IMMP2L NEDD4L chr18 56001124 - IMMP2L chr7 110303777 - Exonic hg19 SKCM TCGA-FR-A726-01A 15 7 In-Frame Inter-chr q21.31 Tumor suppressor gene q31.1 Seq+ 67800 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEDD4L-MORC3 NEDD4L chr18 55833093 - MORC3 chr21 37728918 + Exonic hg19 PRAD TCGA-KK-A8IL-01A 5 7 In-Frame Inter-chr q21.31 Tumor suppressor gene q22.12 Seq+ 67801 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEDD4L-TLN2 NEDD4L chr18 55711940 - TLN2 chr15 63063163 + Exonic hg19 BRCA TCGA-A8-A06P-01A 5 8 In-Frame Inter-chr q21.31 Tumor suppressor gene q22.2 Seq+ 67802 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEDD4L-ZC3H7A NEDD4L chr18 55919286 - ZC3H7A chr16 11876244 - Exonic hg19 PRAD TCGA-EJ-8470-01A 96 51 5'UTR-5'UTR Inter-chr q21.31 Tumor suppressor gene p13.13 Seq+ 67803 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEDD4L-ZNF396 NEDD4L chr18 55919286 - ZNF396 chr18 32954328 - Exonic hg19 BRCA TCGA-E9-A1R6-01A 17 6 5'UTR-5'UTR Intra-chr q21.31 Tumor suppressor gene q12.2 Transcription factor Seq+ 67804 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEDD9-C6orf105 NEDD9 chr6 11213514 - C6orf105 chr6 11714745 - Exonic hg19 UCEC TCGA-A5-A2K2-01A 189 145 Out-of-frame Intra-chr p24.2 67805 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEDD9-DTNBP1 NEDD9 chr6 11232737 - DTNBP1 chr6 15533626 - Exonic hg19 SKCM TCGA-EB-A85J-01A 60 52 Out-of-frame Intra-chr p24.2 p22.3 Seq+ 67806 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEDD9-GOLGB1 NEDD9 chr6 11213514 - GOLGB1 chr3 121388202 - Exonic hg19 UCEC TCGA-EY-A3QX-01A 160 135 In-Frame Inter-chr p24.2 q13.33 Seq+ 67807 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEGR1-C1orf173 NEGR1 chr1 72748002 - C1orf173 chr1 75114999 - Exonic hg19 BRCA TCGA-OL-A5RW-01A 7 2 In-Frame Intra-chr p31.1 67808 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEGR1-CYP2J2 NEGR1 chr1 72748002 - CYP2J2 chr1 60381772 - Exonic hg19 SKCM TCGA-ER-A3ET-06A 6 9 Out-of-frame Intra-chr p31.1 p32.1 Seq+ 67809 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEGR1-ZFYVE9 NEGR1 chr1 72748002 - ZFYVE9 chr1 52682041 + Exonic hg19 SARC TCGA-DX-AB36-01A 22 12 CDS-5'UTR Intra-chr p31.1 p32.3 Seq+ 67810 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEGR1-ZRANB2 NEGR1 chr1 72748002 - ZRANB2 chr1 71544391 - Exonic hg19 GBM TCGA-41-5651-01A 2 4 In-Frame Intra-chr p31.1 p31.1 Seq+ 67811 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEIL2-GATA4 NEIL2 chr8 11629094 - GATA4 chr8 11606428 + Exonic hg19 TGCT TCGA-2G-AAGW-01A 3 1 Out-of-frame Intra-chr p23.1 p23.1 Tumor suppressor gene Transcription factor 67812 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEIL2-TTC7B NEIL2 chr8 11637459 - TTC7B chr14 91146879 - Exonic hg19 BLCA TCGA-GC-A4ZW-01A 3 1 In-Frame Inter-chr p23.1 q32.11 67813 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEIL3-AGA NEIL3 chr4 178272703 - AGA chr4 178352962 - Exonic hg19 BLCA TCGA-KQ-A41P-01A 4 4 In-Frame Intra-chr q34.3 q34.3 Seq+ 67814 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEK11-ATP2C1 NEK11 chr3 130852800 - ATP2C1 chr3 130649260 + Exonic hg19 BRCA TCGA-D8-A140-01A 8 6 Out-of-frame Intra-chr q22.1 Other:NEK q22.1 Seq+ 67815 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEK11-BDH1 NEK11 chr3 130889731 - BDH1 chr3 197241287 - Exonic hg19 LGG TCGA-HT-A5RA-01A 27 11 In-Frame Intra-chr q22.1 Other:NEK Seq+ 67816 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEK11-FAM150A NEK11 chr3 130852800 - FAM150A chr8 53455005 - Exonic hg19 LUSC TCGA-56-8622-01A 5 2 Out-of-frame Inter-chr q22.1 Other:NEK 67817 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEK3-GXYLT2 NEK3 chr13 52722550 - GXYLT2 chr3 73006380 + Exonic hg19 SKCM TCGA-EB-A44R-06A 23 12 In-Frame Inter-chr q14.3 Other:NEK p13 Seq+ 67818 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEK4-SETD2 NEK4 chr3 52771602 - SETD2 chr3 47108608 - Exonic hg19 BLCA TCGA-DK-A1AF-01A 6 5 In-Frame Intra-chr p21.1 Other:NEK p21.31 Oncogene Tumor suppressor gene Seq+ 67819 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEK4-TMEM110 NEK4 chr3 52797486 - TMEM110 chr3 52889460 - Exonic hg19 ACC TCGA-PK-A5HA-01A 2 1 Out-of-frame Intra-chr p21.1 Other:NEK p21.1 Seq+ 67820 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEK7-ATP2B4 NEK7 chr1 198126406 - ATP2B4 chr1 203651870 + Exonic hg19 LUSC TCGA-39-5034-01A 4 2 5'UTR-5'UTR Intra-chr q31.3 Other:NEK q32.1 Seq+ 67821 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEK7-CADM3 NEK7 chr1 198233365 - CADM3 chr1 159161726 + Exonic hg19 BLCA TCGA-K4-A3WU-01B 3 1 Out-of-frame Intra-chr q31.3 Other:NEK q23.2 Tumor suppressor gene 67822 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEK7-CD1C NEK7 chr1 198126406 - CD1C chr1 158260924 + Exonic hg19 PRAD TCGA-EJ-A8FS-01A 18 12 5'UTR-CDS Intra-chr q31.3 Other:NEK q23.1 Seq+ 67823 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEK7-CRB1 NEK7 chr1 198126406 - CRB1 chr1 197297552 + Exonic hg19 BRCA TCGA-AR-A0U4-01A 4 7 5'UTR-5'UTR Intra-chr q31.3 Other:NEK q31.3 Seq+ 67824 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEK7-INTS7 NEK7 chr1 198233365 - INTS7 chr1 212115453 - Exonic hg19 BRCA TCGA-OK-A5Q2-01A 5 7 In-Frame Intra-chr q31.3 Other:NEK q32.3 Seq+ 67825 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEK7-RAB3GAP2 NEK7 chr1 198126406 - RAB3GAP2 chr1 220387321 - Exonic hg19 LUSC TCGA-94-8491-01A 4 3 5'UTR-CDS Intra-chr q31.3 Other:NEK q41 Seq+ 67826 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEK7-SMYD3 NEK7 chr1 198201767 - SMYD3 chr1 246093239 - Exonic hg19 SARC TCGA-QQ-A5VC-01A 17 19 In-Frame Intra-chr q31.3 Other:NEK q44 Transcription factor Seq+ 67827 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEK9-RP11-293M10.1 NEK9 chr14 75568360 - RP11-293M10.1 chr14 75705892 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 2 2 Out-of-frame Intra-chr q24.3 Other:NEK 67828 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NELF-ZMYND19 NELF chr9 140346817 - ZMYND19 chr9 140477138 - Exonic hg19 ESCA TCGA-L5-A4OS-01A 11 54 In-Frame Intra-chr q34.3 Seq+ 67829 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NELL1-C11orf75 NELL1 chr11 20907086 - C11orf75 chr11 93232514 - Exonic hg19 SKCM TCGA-ER-A19H-06A 17 16 CDS-5'UTR Intra-chr p15.1 Seq+ 67830 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NELL1-CCDC83 NELL1 chr11 20982106 - CCDC83 chr11 85576139 + Exonic hg19 BRCA TCGA-D8-A1XZ-01A 5 5 CDS-5'UTR Intra-chr p15.1 q14.1 Seq+ 67831 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NELL2-ATF7 NELL2 chr12 45315573 - ATF7 chr12 53946421 - Exonic hg19 BRCA TCGA-E2-A1L8-01A 5 8 5'UTR-CDS Intra-chr q12 q13.13 Transcription factor Seq+ 67832 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NELL2-MUC21 NELL2 chr12 45059267 - MUC21 chr6 30954014 + Exonic hg19 SARC TCGA-3B-A9HL-01A 17 5 In-Frame Inter-chr q12 Seq+ 67833 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEMF-C14orf182 NEMF chr14 50307436 - C14orf182 chr14 50459591 - Exonic hg19 LUSC TCGA-37-3783-01A 79 40 In-Frame Intra-chr q21.3 Seq+ 67834 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEMF-C14orf182 NEMF chr14 50262509 - C14orf182 chr14 50459591 - Exonic hg19 BRCA TCGA-C8-A12P-01A 10 8 Out-of-frame Intra-chr q21.3 Seq+ 67835 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEMF-CDKL1 NEMF chr14 50295009 - CDKL1 chr14 50808940 - Exonic hg19 BRCA TCGA-E9-A1N9-01A 13 24 In-Frame Intra-chr q21.3 q22.1 CMGC:CDKL Seq+ 67836 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEMF-METTL21D NEMF chr14 50255864 - METTL21D chr14 50576431 - Exonic hg19 PRAD TCGA-EJ-A46G-01A 17 12 In-Frame Intra-chr q21.3 67837 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEMF-SOS2 NEMF chr14 50300141 - SOS2 chr14 50587102 - Exonic hg19 BRCA TCGA-C8-A27B-01A 29 12 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 67838 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEMF-SOS2 NEMF chr14 50280706 - SOS2 chr14 50612314 - Exonic hg19 ESCA TCGA-L5-A43I-01A 2 20 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 67839 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEMF-SOS2 NEMF chr14 50280706 - SOS2 chr14 50587102 - Exonic hg19 LUAD TCGA-MP-A4TI-01A 6 2 In-Frame Intra-chr q21.3 q21.3 Seq+ 67840 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEO1-BBS4 NEO1 chr15 73428368 - BBS4 chr15 73002041 + Exonic hg19 SARC TCGA-DX-AATS-01A 4 3 In-Frame Intra-chr q24.1 q24.1 Seq+ 67841 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEO1-CNRIP1 NEO1 chr15 73428368 - CNRIP1 chr2 68521158 - Exonic hg19 OV TCGA-25-1326-01A 35 121 Out-of-frame Inter-chr q24.1 p14 Seq+ 67842 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEO1-NR2E3 NEO1 chr15 73470768 - NR2E3 chr15 72109893 + Exonic hg19 PRAD TCGA-ZG-A9ND-01A 6 2 Out-of-frame Intra-chr q24.1 q23 Transcription factor 67843 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEO1-THSD4 NEO1 chr15 73470768 - THSD4 chr15 71704026 + Exonic hg19 OV TCGA-24-1428-01A 8 15 In-Frame Intra-chr q24.1 q23 Seq+ 67844 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEO1-ZFAT NEO1 chr15 73428368 - ZFAT chr8 135669980 - Exonic hg19 SARC TCGA-MB-A8JK-01A 23 19 In-Frame Inter-chr q24.1 q24.22 Transcription factor Seq+ 67845 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NES-UVRAG NES chr1 156638555 - UVRAG chr11 75694431 + Exonic hg19 SKCM TCGA-EE-A3JI-06A 2 1 3'UTR-CDS Inter-chr q23.1 q13.5 Tumor suppressor gene 67846 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NET1-ACSM3 NET1 chr10 5471192 - ACSM3 chr16 20807692 + Exonic hg19 PRAD TCGA-CH-5752-01A 20 15 In-Frame Inter-chr p15.1 p12.3 Seq+ 67847 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NET1-RIMKLB NET1 chr10 5471192 - RIMKLB chr12 8925917 + Exonic hg19 TGCT TCGA-YU-A94I-01A 4 29 Out-of-frame Inter-chr p15.1 p13.31 Seq+ 67848 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NET1-TUBAL3 NET1 chr10 5454783 - TUBAL3 chr10 5437438 - Exonic hg19 STAD TCGA-BR-8059-01A 2 9 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 67849 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEU3-NDUFV1 NEU3 chr11 74700199 - NDUFV1 chr11 67375867 + Exonic hg19 BRCA TCGA-AC-A3OD-01B 10 9 Out-of-frame Intra-chr q13.4 q13.2 Seq+ 67850 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEU3-SNTG1 NEU3 chr11 74716670 - SNTG1 chr8 51503439 + Exonic hg19 BRCA TCGA-BH-A201-01A 9 6 In-Frame Inter-chr q13.4 q11.21 Seq+ 67851 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEURL-PDCD11 NEURL chr10 105254229 - PDCD11 chr10 105165742 + Exonic hg19 LUSC TCGA-22-1012-01A 6 6 Out-of-frame Intra-chr Tumor suppressor gene q24.33 Seq+ 67852 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEURL4-SOX15 NEURL4 chr17 7229574 - SOX15 chr17 7493056 - Exonic hg19 SARC TCGA-X6-A7WC-01A 20 17 CDS-5'UTR Intra-chr p13.1 p13.1 Tumor suppressor gene Transcription factor Seq+ 67853 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NEXN-AK5 NEXN chr1 78399164 - AK5 chr1 77949002 + Exonic hg19 BRCA TCGA-B6-A0X1-01A 33 24 In-Frame Intra-chr p31.1 p31.1 Seq+ 67854 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-ABCB5 NF1 chr17 29676269 - ABCB5 chr7 20671682 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 8 5 In-Frame Inter-chr q11.2 Oncogene Tumor suppressor gene p21.1 67855 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-ACACA NF1 chr17 29422387 - ACACA chr17 35518964 - Exonic hg19 BRCA TCGA-E9-A1N6-01A 7 9 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene Seq+ 67856 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-ACCN1 NF1 chr17 29560231 - ACCN1 chr17 31439085 - Exonic hg19 SARC TCGA-DX-A3M1-01A 8 2 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene 67857 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-ADAP2 NF1 chr17 29422387 - ADAP2 chr17 29271925 + Exonic hg19 UCEC TCGA-AX-A2H4-01A 2 3 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 67858 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-AGTR1 NF1 chr17 29662049 - AGTR1 chr3 148425731 + Exonic hg19 LUSC TCGA-92-8063-01A 7 6 CDS-5'UTR Inter-chr q11.2 Oncogene Tumor suppressor gene q24 Tumor suppressor gene Seq+ 67859 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-ANKFN1 NF1 chr17 29592357 - ANKFN1 chr17 54520204 + Exonic hg19 BRCA TCGA-A2-A0SY-01A 7 2 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q22 67860 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-ATAD5 NF1 chr17 29422387 - ATAD5 chr17 29203392 + Exonic hg19 STAD TCGA-BR-4357-01A 9 2 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 67861 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-ATAD5 NF1 chr17 29533389 - ATAD5 chr17 29161166 + Exonic hg19 STAD TCGA-CG-4440-01A 5 2 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 67862 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-ATAD5 NF1 chr17 29497015 - ATAD5 chr17 29192722 + Exonic hg19 BRCA TCGA-E2-A1LE-01A 5 3 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 67863 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-BRCA1 NF1 chr17 29653270 - BRCA1 chr17 41215968 - Exonic hg19 PRAD TCGA-2A-A8W1-01A 3 3 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q21.31 Oncogene Tumor suppressor gene Seq+ 67864 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-CACNA1G NF1 chr17 29592357 - CACNA1G chr17 48676789 + Exonic hg19 BRCA TCGA-C8-A1HO-01A 4 2 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q21.33 Seq+ 67865 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-CDK5RAP3 NF1 chr17 29592357 - CDK5RAP3 chr17 46057959 + Exonic hg19 BRCA TCGA-BH-A18R-01A 3 9 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q21.32 Seq+ 67866 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-CLTC NF1 chr17 29563039 - CLTC chr17 57721637 + Exonic hg19 BRCA TCGA-AR-A252-01A 22 8 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q23.1 Seq+ 67867 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-EZH2 NF1 chr17 29592357 - EZH2 chr7 148544397 - Exonic hg19 PCPG TCGA-WB-A820-01A 5 8 CDS-5'UTR Inter-chr q11.2 Oncogene Tumor suppressor gene q36.1 Oncogene Tumor suppressor gene Seq+ 67868 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-GFPT1 NF1 chr17 29664600 - GFPT1 chr2 69556930 - Exonic hg19 STAD TCGA-CG-4477-01A 12 13 In-Frame Inter-chr q11.2 Oncogene Tumor suppressor gene p13.3 Seq+ 67869 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-IKZF3 NF1 chr17 29563039 - IKZF3 chr17 37988404 - Exonic hg19 PAAD TCGA-3A-A9J0-01A 12 5 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q21.1 Tumor suppressor gene Transcription factor Seq+ 67870 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-MAP2K4 NF1 chr17 29509683 - MAP2K4 chr17 12028611 + Exonic hg19 CHOL TCGA-W5-AA31-01A 18 25 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene p12 STE:STE7 Oncogene Tumor suppressor gene Seq+ 67871 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-NLE1 NF1 chr17 29497015 - NLE1 chr17 33464212 - Exonic hg19 BRCA TCGA-A8-A09I-01A 15 5 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q12 Seq+ 67872 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-PDS5B NF1 chr17 29422387 - PDS5B chr13 33281071 + Exonic hg19 BRCA TCGA-E9-A22D-01A 2 5 Out-of-frame Inter-chr q11.2 Oncogene Tumor suppressor gene q13.1 Tumor suppressor gene 67873 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-PSMD11 NF1 chr17 29497015 - PSMD11 chr17 30773963 + Exonic hg19 LUAD TCGA-44-5644-01A 13 13 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 67874 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-RNF135 NF1 chr17 29422387 - RNF135 chr17 29324260 + Exonic hg19 LUSC TCGA-77-7142-01A 19 38 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 67875 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-RNF135 NF1 chr17 29497015 - RNF135 chr17 29324260 + Exonic hg19 HNSC TCGA-HL-7533-01A 18 12 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 67876 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-RPTOR NF1 chr17 29422387 - RPTOR chr17 78599491 + Exonic hg19 SARC TCGA-JV-A75J-01A 19 24 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q25.3 Seq+ 67877 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-SPACA3 NF1 chr17 29497015 - SPACA3 chr17 31323861 + Exonic hg19 BLCA TCGA-DK-AA6X-01A 14 20 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 67878 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-TPMT NF1 chr17 29422387 - TPMT chr6 18149402 - Exonic hg19 OV TCGA-13-0714-01A 2 1 CDS-5'UTR Inter-chr q11.2 Oncogene Tumor suppressor gene p22.3 Seq+ 67879 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-TRMT61B NF1 chr17 29497015 - TRMT61B chr2 29084174 - Exonic hg19 LGG TCGA-FG-7643-01A 3 1 In-Frame Inter-chr q11.2 Oncogene Tumor suppressor gene p23.2 67880 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF1-YPEL5 NF1 chr17 29528503 - YPEL5 chr2 30379494 + Exonic hg19 UCEC TCGA-EO-A3KW-01A 12 4 CDS-5'UTR Inter-chr q11.2 Oncogene Tumor suppressor gene p23.1 Seq+ 67881 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF2-CLTCL1 NF2 chr22 30079053 - CLTCL1 chr22 19171124 - Exonic hg19 BRCA TCGA-EW-A1PH-01A 9 3 3'UTR-CDS Intra-chr q12.2 Oncogene Tumor suppressor gene q11.21 Seq+ 67882 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF2-EIF3D NF2 chr22 30000101 - EIF3D chr22 36908649 - Exonic hg19 BRCA TCGA-V7-A7HQ-01A 6 6 In-Frame Intra-chr q12.2 Oncogene Tumor suppressor gene q12.3 Seq+ 67883 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF2-GRAP2 NF2 chr22 30035201 - GRAP2 chr22 40351823 + Exonic hg19 BRCA TCGA-A2-A0SV-01A 50 35 In-Frame Intra-chr q12.2 Oncogene Tumor suppressor gene q13.1 Seq+ 67884 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF2-HSD3B2 NF2 chr22 30000101 - HSD3B2 chr1 119957954 + Exonic hg19 BRCA TCGA-GI-A2C9-01A 8 5 CDS-5'UTR Inter-chr q12.2 Oncogene Tumor suppressor gene p12 Seq+ 67885 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NF2-PIAS1 NF2 chr22 30000101 - PIAS1 chr15 68378644 + Exonic hg19 MESO TCGA-LK-A4O7-01A 9 4 In-Frame Inter-chr q12.2 Oncogene Tumor suppressor gene q23 Tumor suppressor gene Seq+ 67886 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFASC-ATP2B4 NFASC chr1 204797910 - ATP2B4 chr1 203667285 + Exonic hg19 LGG TCGA-DU-A7TD-01A 439 308 5'UTR-CDS Intra-chr q32.1 q32.1 Seq+ 67887 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFASC-CCNDBP1 NFASC chr1 204797910 - CCNDBP1 chr15 43481397 + Exonic hg19 SKCM TCGA-D3-A51E-06A 26 17 5'UTR-5'UTR Inter-chr q32.1 q15.2 Tumor suppressor gene Seq+ 67888 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFASC-LRRN2 NFASC chr1 204797910 - LRRN2 chr1 204589346 - Exonic hg19 GBM TCGA-27-1834-01A 4 18 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 67889 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFASC-NTRK1 NFASC chr1 204951148 - NTRK1 chr1 156844363 + Exonic hg19 GBM TCGA-06-5411-01A 168 647 In-Frame Intra-chr q32.1 q23.1 Oncogene Seq+ 67890 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFASC-PPP1R12B NFASC chr1 204957934 - PPP1R12B chr1 202531906 + Exonic hg19 LGG TCGA-FG-6688-01A 41 19 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 67891 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFASC-PRELP NFASC chr1 204797910 - PRELP chr1 203452297 + Exonic hg19 GBM TCGA-06-0210-01A 21 71 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 67892 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFASC-PRELP NFASC chr1 204797910 - PRELP chr1 203452297 + Exonic hg19 GBM TCGA-06-0210-02A 4 11 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 67893 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFASC-RP5-862P8.2 NFASC chr1 204926954 - RP5-862P8.2 chr1 233507784 + Exonic hg19 BRCA TCGA-AN-A04D-01A 2 2 Out-of-frame Intra-chr q32.1 67894 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFASC-RTN3 NFASC chr1 204951148 - RTN3 chr11 63525628 + Exonic hg19 GBM TCGA-12-1597-01B 29 54 Out-of-frame Inter-chr q32.1 q13.1 Seq+ 67895 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFASC-SOX13 NFASC chr1 204797910 - SOX13 chr1 204082043 + Exonic hg19 GBM TCGA-06-0157-01A 10 44 5'UTR-5'UTR Intra-chr q32.1 q32.1 Transcription factor Seq+ 67896 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFAT5-CDH3 NFAT5 chr16 69704191 - CDH3 chr16 68732094 + Exonic hg19 LUSC TCGA-94-7557-01A 16 16 In-Frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 67897 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFAT5-CHST4 NFAT5 chr16 69600277 - CHST4 chr16 71570563 + Exonic hg19 BLCA TCGA-GC-A3YS-01A 11 11 5'UTR-5'UTR Intra-chr q22.1 Transcription factor q22.2 Seq+ 67898 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFAT5-CRYM NFAT5 chr16 69600277 - CRYM chr16 21281212 - Exonic hg19 READ TCGA-AH-6549-01A 26 18 Out-of-frame Intra-chr q22.1 Transcription factor Seq+ 67899 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFAT5-CSMD2 NFAT5 chr16 69600277 - CSMD2 chr1 34015950 - Exonic hg19 KIRP TCGA-SX-A71S-01A 47 44 In-Frame Inter-chr q22.1 Transcription factor p35.1 Seq+ 67900 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFAT5-DYNLRB2 NFAT5 chr16 69660431 - DYNLRB2 chr16 80583381 + Exonic hg19 SARC TCGA-QQ-A5VC-01A 5 2 In-Frame Intra-chr q22.1 Transcription factor q23.2 67901 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFAT5-FHOD1 NFAT5 chr16 69602451 - FHOD1 chr16 67266097 - Exonic hg19 LUAD TCGA-91-8496-01A 2 1 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 67902 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFAT5-HHAT NFAT5 chr16 69602451 - HHAT chr1 210560812 + Exonic hg19 LUAD TCGA-91-8497-01A 23 6 Out-of-frame Inter-chr q22.1 Transcription factor Seq+ 67903 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFAT5-NOB1 NFAT5 chr16 69602451 - NOB1 chr16 69788629 - Exonic hg19 LUSC TCGA-43-A56V-01A 3 1 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 67904 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFAT5-NUP93 NFAT5 chr16 69600277 - NUP93 chr16 56832388 + Exonic hg19 MESO TCGA-YS-AA4M-01A 19 18 Out-of-frame Intra-chr q22.1 Transcription factor q13 Seq+ 67905 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFAT5-PITPNM2 NFAT5 chr16 69600277 - PITPNM2 chr12 123519232 - Exonic hg19 UCEC TCGA-B5-A3FB-01A 5 1 5'UTR-5'UTR Inter-chr q22.1 Transcription factor q24.31 Seq+ 67906 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFAT5-SLC7A6 NFAT5 chr16 69602451 - SLC7A6 chr16 68321649 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 2 1 In-Frame Intra-chr q22.1 Transcription factor q22.1 67907 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFAT5-TCF7L2 NFAT5 chr16 69600277 - TCF7L2 chr10 114900943 + Exonic hg19 PRAD TCGA-HC-7209-01A 11 13 Out-of-frame Inter-chr q22.1 Transcription factor q25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 67908 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFAT5-VPS4A NFAT5 chr16 69600277 - VPS4A chr16 69349911 + Exonic hg19 COAD TCGA-CM-5860-01A 8 7 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 67909 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFATC2-DOK5 NFATC2 chr20 50133323 - DOK5 chr20 53171472 + Exonic hg19 SKCM TCGA-EE-A2MH-06A 2 2 In-Frame Intra-chr q13.2 Tumor suppressor gene Transcription factor q13.2 Seq+ 67910 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFATC2-PHACTR3 NFATC2 chr20 50048604 - PHACTR3 chr20 58420244 + Exonic hg19 SKCM TCGA-EE-A2MH-06A 8 7 Out-of-frame Intra-chr q13.2 Tumor suppressor gene Transcription factor q13.32 Seq+ 67911 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFATC2IP-HS3ST4 NFATC2IP chr16 28970421 - HS3ST4 chr16 26146933 + Exonic hg19 BRCA TCGA-D8-A27M-01A 9 5 Out-of-frame Intra-chr p11.2 p12.1 Seq+ 67912 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFATC2IP-KIAA0556 NFATC2IP chr16 28963525 - KIAA0556 chr16 27760905 + Exonic hg19 SARC TCGA-X6-A8C2-01A 4 2 In-Frame Intra-chr p11.2 p12.1 Seq+ 67913 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFATC3-C16orf55 NFATC3 chr16 68225678 - C16orf55 chr16 89735694 + Exonic hg19 PRAD TCGA-M7-A724-01A 4 6 In-Frame Intra-chr q22.1 Transcription factor 67914 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFE2-STARD7 NFE2 chr12 54693931 - STARD7 chr2 96853039 - Exonic hg19 LUAD TCGA-91-7771-01A 2 2 5'UTR-CDS Inter-chr q13.13 Transcription factor q11.2 Seq+ 67915 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFE2L1-NPEPPS NFE2L1 chr17 46125824 - NPEPPS chr17 45673719 + Exonic hg19 ACC TCGA-OR-A5J7-01A 9 7 5'UTR-CDS Intra-chr q21.32 Transcription factor q21.32 Seq+ 67916 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFE2L1-SLC39A11 NFE2L1 chr17 46134864 - SLC39A11 chr17 70944014 - Exonic hg19 SKCM TCGA-EB-A4XL-01A 10 6 In-Frame Intra-chr q21.32 Transcription factor q25.1 Seq+ 67917 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFE2L2-AGPS NFE2L2 chr2 178128165 - AGPS chr2 178386057 + Exonic hg19 BLCA TCGA-ZF-AA5P-01A 5 2 Out-of-frame Intra-chr q31.2 Oncogene Transcription factor q31.2 67918 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFE2L2-GAPVD1 NFE2L2 chr2 178097120 - GAPVD1 chr9 128083712 + Exonic hg19 LIHC TCGA-DD-AACU-01A 3 3 In-Frame Inter-chr q31.2 Oncogene Transcription factor q33.3 Seq+ 67919 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFE2L2-PDE11A NFE2L2 chr2 178097120 - PDE11A chr2 178634101 - Exonic hg19 LUSC TCGA-18-4721-01A 11 8 In-Frame Intra-chr q31.2 Oncogene Transcription factor q31.2 Seq+ 67920 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFE2L2-RFTN2 NFE2L2 chr2 178129260 - RFTN2 chr2 198437004 - Exonic hg19 HNSC TCGA-DQ-7594-01A 30 15 In-Frame Intra-chr q31.2 Oncogene Transcription factor q33.1 Seq+ 67921 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFE2L2-TMEM194B NFE2L2 chr2 178129260 - TMEM194B chr2 191390104 - Exonic hg19 LIHC TCGA-BC-A8YO-01A 22 21 Out-of-frame Intra-chr q31.2 Oncogene Transcription factor Seq+ 67922 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFE2L2-VMP1 NFE2L2 chr2 178129260 - VMP1 chr17 57851115 + Exonic hg19 STAD TCGA-VQ-A8PM-01A 5 184 In-Frame Inter-chr q31.2 Oncogene Transcription factor q23.1 Seq+ 67923 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFE2L2-ZC3H13 NFE2L2 chr2 178129260 - ZC3H13 chr13 46554139 - Exonic hg19 LUSC TCGA-18-3415-01A 406 378 Out-of-frame Inter-chr q31.2 Oncogene Transcription factor q14.13 Seq+ 67924 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFE2L3-NPY NFE2L3 chr7 26192688 - NPY chr7 24324860 + Exonic hg19 ESCA TCGA-V5-A7RB-01A 3 70 CDS-5'UTR Intra-chr p15.2 Transcription factor p15.3 Seq+ 67925 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIA-CDK2AP1 NFIA chr1 61872399 - CDK2AP1 chr12 123751829 - Exonic hg19 THYM TCGA-XU-A92Z-01A 60 57 In-Frame Inter-chr p31.3 Transcription factor q24.31 Tumor suppressor gene Seq+ 67926 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIA-CLCA1 NFIA chr1 61824946 - CLCA1 chr1 86942131 + Exonic hg19 PRAD TCGA-KK-A6E2-01A 3 2 In-Frame Intra-chr p31.3 Transcription factor p22.3 67927 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIA-CYP2J2 NFIA chr1 61554352 - CYP2J2 chr1 60359501 - Exonic hg19 PRAD TCGA-CH-5740-01A 7 8 In-Frame Intra-chr p31.3 Transcription factor p32.1 Seq+ 67928 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIA-DCLK1 NFIA chr1 61798258 - DCLK1 chr13 36413313 - Exonic hg19 BRCA TCGA-GM-A2DH-01A 6 3 Out-of-frame Inter-chr p31.3 Transcription factor q13.3 CAMK:DCAMKL Seq+ 67929 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIA-FGGY NFIA chr1 61849037 - FGGY chr1 60125891 + Exonic hg19 BRCA TCGA-JL-A3YW-01A 10 6 Out-of-frame Intra-chr p31.3 Transcription factor p32.1 Seq+ 67930 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIA-LTV1 NFIA chr1 61743257 - LTV1 chr6 144167188 + Exonic hg19 BRCA TCGA-B6-A0IQ-01A 8 4 Out-of-frame Inter-chr p31.3 Transcription factor q24.2 Seq+ 67931 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIA-RNLS NFIA chr1 61554352 - RNLS chr10 90122482 - Exonic hg19 GBM TCGA-19-0957-02A 13 15 In-Frame Inter-chr p31.3 Transcription factor q23.31 Seq+ 67932 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIA-ST6GALNAC3 NFIA chr1 61872399 - ST6GALNAC3 chr1 77042531 + Exonic hg19 BRCA TCGA-AO-A1KT-01A 2 3 Out-of-frame Intra-chr p31.3 Transcription factor p31.1 Seq+ 67933 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIA-ZNF253 NFIA chr1 61554352 - ZNF253 chr19 20002283 + Exonic hg19 READ TCGA-EI-6509-01A 6 4 In-Frame Inter-chr p31.3 Transcription factor p13.11 Transcription factor Seq+ 67934 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIB-FREM1 NFIB chr9 14146688 - FREM1 chr9 14759899 - Exonic hg19 LUSC TCGA-43-6143-01A 3 6 Out-of-frame Intra-chr p22.3 Transcription factor p22.3 Seq+ 67935 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIB-HEATR5B NFIB chr9 14313481 - HEATR5B chr2 37208937 - Exonic hg19 BRCA TCGA-A1-A0SB-01A 190 104 Out-of-frame Inter-chr p22.3 Transcription factor p22.2 Seq+ 67936 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIB-STRN NFIB chr9 14313481 - STRN chr2 37152351 - Exonic hg19 BRCA TCGA-A1-A0SB-01A 8 11 In-Frame Inter-chr p22.3 Transcription factor p22.2 Seq+ 67937 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIB-ZDHHC21 NFIB chr9 14306988 - ZDHHC21 chr9 14662324 - Exonic hg19 LUAD TCGA-75-6211-01A 6 6 In-Frame Intra-chr p22.3 Transcription factor p22.3 Seq+ 67938 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIC-C16orf55 NFIC chr19 3359683 - C16orf55 chr16 89735694 + Exonic hg19 ACC TCGA-OR-A5K2-01A 30 19 Out-of-frame Inter-chr p13.3 Transcription factor Seq+ 67939 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIC-C19orf77 NFIC chr19 3382241 - C19orf77 chr19 3478927 - Exonic hg19 LIHC TCGA-5C-A9VG-01A 7 8 In-Frame Intra-chr p13.3 Transcription factor Seq+ 67940 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIC-CELF5 NFIC chr19 3382241 - CELF5 chr19 3273870 + Exonic hg19 LIHC TCGA-BC-A10R-01A 4 5 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 67941 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIC-CELF5 NFIC chr19 3452664 - CELF5 chr19 3250983 + Exonic hg19 LIHC TCGA-DD-A11A-01A 4 1 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 67942 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIC-CELF5 NFIC chr19 3435205 - CELF5 chr19 3284900 + Exonic hg19 LGG TCGA-DU-6396-01A 21 5 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 67943 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIC-CELF5 NFIC chr19 3382241 - CELF5 chr19 3250983 + Exonic hg19 LGG TCGA-DU-A7TD-01A 40 10 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 67944 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIC-CELF5 NFIC chr19 3382241 - CELF5 chr19 3281197 + Exonic hg19 BLCA TCGA-E7-A5KE-01A 9 1 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 67945 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIC-CELF5 NFIC chr19 3366664 - CELF5 chr19 3273870 + Exonic hg19 PRAD TCGA-ZG-A8QY-01A 13 15 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 67946 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIC-IL4I1 NFIC chr19 3382241 - IL4I1 chr19 50394364 - Exonic hg19 SARC TCGA-DX-A1L0-01A 15 10 Out-of-frame Intra-chr p13.3 Transcription factor q13.33 Seq+ 67947 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIC-LSM7 NFIC chr19 3435205 - LSM7 chr19 2324195 - Exonic hg19 CESC TCGA-DS-A1OD-01A 203 80 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 67948 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIC-TLE6 NFIC chr19 3382241 - TLE6 chr19 2980098 + Exonic hg19 CESC TCGA-VS-A9V0-01A 13 6 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 67949 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIC-UNC13A NFIC chr19 3425175 - UNC13A chr19 17722664 - Exonic hg19 SARC TCGA-DX-A8BL-01A 5 1 In-Frame Intra-chr p13.3 Transcription factor p13.11 67950 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIC-WDR18 NFIC chr19 3425175 - WDR18 chr19 989762 + Exonic hg19 BRCA TCGA-A2-A04U-01A 5 6 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 67951 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIX-ANXA1 NFIX chr19 13209610 - ANXA1 chr9 75772570 + Exonic hg19 PRAD TCGA-EJ-5506-01A 2 3 Out-of-frame Inter-chr p13.13 Transcription factor q21.13 Tumor suppressor gene 67952 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIX-CAPN12 NFIX chr19 13192669 - CAPN12 chr19 39233168 - Exonic hg19 PRAD TCGA-HC-A4ZV-01A 193 49 Out-of-frame Intra-chr p13.13 Transcription factor q13.2 Seq+ 67953 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIX-CRYBB3 NFIX chr19 13106678 - CRYBB3 chr22 25597344 + Exonic hg19 BLCA TCGA-E7-A4IJ-01A 5 14 CDS-5'UTR Inter-chr p13.13 Transcription factor q11.23 Seq+ 67954 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIX-DAND5 NFIX chr19 13201204 - DAND5 chr19 13084203 + Exonic hg19 LUAD TCGA-38-4630-01A 6 3 3'UTR-CDS Intra-chr p13.13 Transcription factor p13.13 Seq+ 67955 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIX-DAND5 NFIX chr19 13201204 - DAND5 chr19 13084203 + Exonic hg19 BRCA TCGA-C8-A26X-01A 47 56 3'UTR-CDS Intra-chr p13.13 Transcription factor p13.13 Seq+ 67956 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIX-DAND5 NFIX chr19 13136366 - DAND5 chr19 13084203 + Exonic hg19 BRCA TCGA-D8-A27H-01A 10 3 Out-of-frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 67957 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIX-DNM2 NFIX chr19 13106678 - DNM2 chr19 10897240 + Exonic hg19 LUSC TCGA-34-8456-01A 4 7 In-Frame Intra-chr p13.13 Transcription factor p13.2 Seq+ 67958 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIX-DOCK6 NFIX chr19 13136366 - DOCK6 chr19 11364402 - Exonic hg19 ESCA TCGA-2H-A9GG-01A 5 38 Out-of-frame Intra-chr p13.13 Transcription factor p13.2 Seq+ 67959 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIX-GATAD2A NFIX chr19 13184840 - GATAD2A chr19 19603115 + Exonic hg19 THCA TCGA-FY-A2QD-01A 18 18 In-Frame Intra-chr p13.13 Transcription factor p13.11 Transcription factor Seq+ 67960 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIX-GCDH NFIX chr19 13136366 - GCDH chr19 13002930 + Exonic hg19 LUAD TCGA-55-8506-01A 33 22 In-Frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 67961 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIX-GCDH NFIX chr19 13136366 - GCDH chr19 13002085 + Exonic hg19 LUSC TCGA-94-8491-01A 2 1 CDS-5'UTR Intra-chr p13.13 Transcription factor p13.13 Seq+ 67962 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIX-MAST1 NFIX chr19 13136366 - MAST1 chr19 12962748 + Exonic hg19 PAAD TCGA-LB-A7SX-01A 4 2 Out-of-frame Intra-chr p13.13 Transcription factor p13.13 AGC:MAST Seq+ 67963 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIX-MAST1 NFIX chr19 13136366 - MAST1 chr19 12975623 + Exonic hg19 CESC TCGA-VS-A952-01A 21 10 In-Frame Intra-chr p13.13 Transcription factor p13.13 AGC:MAST Seq+ 67964 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIX-RAD23A NFIX chr19 13106678 - RAD23A chr19 13063503 + Exonic hg19 LIHC TCGA-BC-A10T-01A 17 26 In-Frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 67965 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIX-RALGPS1 NFIX chr19 13136366 - RALGPS1 chr9 129928348 + Exonic hg19 HNSC TCGA-CV-7428-01A 20 12 In-Frame Inter-chr p13.13 Transcription factor q33.3 Seq+ 67966 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIX-RFX1 NFIX chr19 13106678 - RFX1 chr19 14088898 - Exonic hg19 STAD TCGA-IN-A6RI-01A 9 24 In-Frame Intra-chr p13.13 Transcription factor p13.12 Transcription factor Seq+ 67967 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIX-SEMA3A NFIX chr19 13136366 - SEMA3A chr7 83614793 - Exonic hg19 SARC TCGA-MB-A8JK-01A 3 7 Out-of-frame Inter-chr p13.13 Transcription factor q21.11 Seq+ 67968 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIX-VDR NFIX chr19 13136366 - VDR chr12 48272898 - Exonic hg19 STAD TCGA-FP-8631-01A 4 13 In-Frame Inter-chr p13.13 Transcription factor q13.11 Tumor suppressor gene Transcription factor Seq+ 67969 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFIX-WDR26 NFIX chr19 13136366 - WDR26 chr1 224581715 - Exonic hg19 LUSC TCGA-56-8628-01A 13 6 In-Frame Inter-chr p13.13 Transcription factor q42.12 Seq+ 67970 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFKB1-BANK1 NFKB1 chr4 103516138 - BANK1 chr4 102984232 + Exonic hg19 SARC TCGA-DX-A8BU-01A 3 11 Out-of-frame Intra-chr q24 Oncogene Tumor suppressor gene Transcription factor q24 Seq+ 67971 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFKB1-LHFPL3 NFKB1 chr4 103446714 - LHFPL3 chr7 104546634 + Exonic hg19 PRAD TCGA-G9-6377-01A 5 3 Out-of-frame Inter-chr q24 Oncogene Tumor suppressor gene Transcription factor q22.2 Seq+ 67972 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFKB1-MANBA NFKB1 chr4 103422945 - MANBA chr4 103571858 - Exonic hg19 LGG TCGA-E1-5304-01A 2 1 5'UTR-CDS Intra-chr q24 Oncogene Tumor suppressor gene Transcription factor q24 67973 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFKB2-GBF1 NFKB2 chr10 104156246 - GBF1 chr10 104128496 + Exonic hg19 BRCA TCGA-E2-A1LE-01A 7 3 Out-of-frame Intra-chr q24.32 Oncogene Transcription factor q24.32 Seq+ 67974 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFKBID-ZNF585B NFKBID chr19 36389374 - ZNF585B chr19 37698156 - Exonic hg19 LUAD TCGA-69-A59K-01A 12 5 5'UTR-5'UTR Intra-chr q13.12 q13.12 Transcription factor Seq+ 67975 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFKBIE-FBXO9 NFKBIE chr6 44232719 - FBXO9 chr6 52935855 + Exonic hg19 ACC TCGA-OR-A5J8-01A 8 4 Out-of-frame Intra-chr p21.1 p12.1 Seq+ 67976 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFKBIE-SLC29A1 NFKBIE chr6 44227780 - SLC29A1 chr6 44194997 + Exonic hg19 KIRC TCGA-A3-3311-01A 63 31 CDS-5'UTR Intra-chr p21.1 p21.1 Seq+ 67977 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFKBIZ-ZBED2 NFKBIZ chr3 101548532 - ZBED2 chr3 111313913 - Exonic hg19 LUSC TCGA-77-7140-01A 2 4 5'UTR-5'UTR Intra-chr q12.3 q13.13 Transcription factor 67978 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFRKB-NOX4 NFRKB chr11 129755330 - NOX4 chr11 89135710 - Exonic hg19 BRCA TCGA-E9-A229-01A 4 1 Out-of-frame Intra-chr q24.3 q14.3 Seq+ 67979 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFX1-ACO1 NFX1 chr9 33351788 - ACO1 chr9 32440463 + Exonic hg19 LUSC TCGA-18-4721-01A 8 6 In-Frame Intra-chr p13.3 Transcription factor p21.1 Seq+ 67980 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFX1-C9orf100 NFX1 chr9 33319125 - C9orf100 chr9 35664123 - Exonic hg19 HNSC TCGA-CR-7376-01A 2 3 Out-of-frame Intra-chr p13.3 Transcription factor 67981 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFX1-C9orf24 NFX1 chr9 33295425 - C9orf24 chr9 34382867 - Exonic hg19 GBM TCGA-12-3652-01A 6 12 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 67982 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFX1-DNAJA1 NFX1 chr9 33290595 - DNAJA1 chr9 33029883 + Exonic hg19 UCS TCGA-N8-A56S-01A 18 31 In-Frame Intra-chr p13.3 Transcription factor p21.1 Seq+ 67983 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFX1-ELAVL2 NFX1 chr9 33295425 - ELAVL2 chr9 23731123 - Exonic hg19 SKCM TCGA-D3-A8GN-06A 6 2 In-Frame Intra-chr p13.3 Transcription factor p21.3 67984 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFX1-NOL6 NFX1 chr9 33332500 - NOL6 chr9 33470189 - Exonic hg19 LUSC TCGA-77-A5GA-01A 2 4 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 67985 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFX1-SPINK4 NFX1 chr9 33319125 - SPINK4 chr9 33218363 + Exonic hg19 BRCA TCGA-E9-A3QA-01A 7 4 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 67986 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFX1-SPINK4 NFX1 chr9 33344186 - SPINK4 chr9 33245110 + Exonic hg19 UCEC TCGA-PG-A915-01A 3 2 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 67987 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFX1-TMEM8B NFX1 chr9 33354890 - TMEM8B chr9 35845972 + Exonic hg19 LUSC TCGA-22-4604-01A 7 5 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 67988 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFX1-ZNF616 NFX1 chr9 33295425 - ZNF616 chr19 52633841 - Exonic hg19 BRCA TCGA-D8-A1XD-01A 26 9 CDS-5'UTR Inter-chr p13.3 Transcription factor q13.41 Transcription factor Seq+ 67989 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFXL1-COPS4 NFXL1 chr4 47892630 - COPS4 chr4 83970319 + Exonic hg19 COAD TCGA-AZ-6601-01A 9 2 In-Frame Intra-chr p12 Transcription factor q21.22 Seq+ 67990 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFYA-AKT2 NFYA chr6 41040823 - AKT2 chr19 40739858 - Exonic hg19 STAD TCGA-RD-A8MW-01A 3 5 5'UTR-CDS Inter-chr p21.1 Transcription factor q13.2 AGC:Akt Oncogene Seq+ 67991 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFYA-TREML2 NFYA chr6 41058048 - TREML2 chr6 41162571 - Exonic hg19 COAD TCGA-DM-A1D7-01A 12 7 In-Frame Intra-chr p21.1 Transcription factor p21.1 Seq+ 67992 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFYC-FAF1 NFYC chr1 41157539 - FAF1 chr1 50957473 - Exonic hg19 SARC TCGA-DX-AATS-01A 7 6 5'UTR-CDS Intra-chr p34.2 Transcription factor p32.3 Seq+ 67993 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NFYC-ZBTB7B NFYC chr1 41157539 - ZBTB7B chr1 154987131 + Exonic hg19 LIHC TCGA-DD-A4NE-01A 27 18 5'UTR-5'UTR Intra-chr p34.2 Transcription factor q21.3 Transcription factor Seq+ 67994 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NGRN-ZNF710 NGRN chr15 90809630 - ZNF710 chr15 90622892 + Exonic hg19 UCEC TCGA-AJ-A3EJ-01A 16 8 Out-of-frame Intra-chr q26.1 q26.1 Transcription factor Seq+ 67995 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NHEJ1-HIBCH NHEJ1 chr2 220011402 - HIBCH chr2 191077801 - Exonic hg19 PAAD TCGA-IB-7654-01A 2 1 In-Frame Intra-chr q35 q32.2 67996 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NHS-F11R NHS chrX 17394445 - F11R chr1 160971143 - Exonic hg19 SARC TCGA-DX-A240-01A 20 9 In-Frame Inter-chr p22.2 q23.3 Seq+ 67997 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NHSL1-C16orf5 NHSL1 chr6 138866760 - C16orf5 chr16 4564665 - Exonic hg19 SARC TCGA-DX-A1L0-01A 127 91 5'UTR-5'UTR Inter-chr q24.1 67998 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NHSL1-KIAA1244 NHSL1 chr6 138817356 - KIAA1244 chr6 138491799 + Exonic hg19 SARC TCGA-IF-A3RQ-01A 2 66 In-Frame Intra-chr q24.1 Seq+ 67999 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NHSL1-LAMA2 NHSL1 chr6 139013613 - LAMA2 chr6 129475650 + Exonic hg19 SARC TCGA-HB-A3YV-01A 3 1 5'UTR-CDS Intra-chr q24.1 q22.33 68000 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NHSL1-PRDM1 NHSL1 chr6 138817356 - PRDM1 chr6 106536076 + Exonic hg19 SARC TCGA-DX-A23Y-01A 159 125 CDS-5'UTR Intra-chr q24.1 q21 Oncogene Tumor suppressor gene Transcription factor Seq+ 68001 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NHSL1-REPS1 NHSL1 chr6 139013613 - REPS1 chr6 139242261 - Exonic hg19 CESC TCGA-DS-A1OC-01A 3 5 5'UTR-CDS Intra-chr q24.1 q24.1 Seq+ 68002 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NHSL1-SLCO2B1 NHSL1 chr6 138763120 - SLCO2B1 chr11 74873700 + Exonic hg19 BLCA TCGA-GV-A40E-01A 8 4 In-Frame Inter-chr q24.1 q13.4 Seq+ 68003 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NHSL1-VTA1 NHSL1 chr6 138750848 - VTA1 chr6 142539635 + Exonic hg19 LUAD TCGA-38-6178-01A 2 1 Out-of-frame Intra-chr q24.1 q24.1 68004 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIN-FAM179B NIN chr14 51297182 - FAM179B chr14 45521639 + Exonic hg19 BRCA TCGA-E9-A1N6-01A 10 1 5'UTR-CDS Intra-chr q22.1 Oncogene Seq+ 68005 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIN-STXBP6 NIN chr14 51202234 - STXBP6 chr14 25326363 - Exonic hg19 LUSC TCGA-85-8355-01A 2 3 Out-of-frame Intra-chr q22.1 Oncogene q12 Seq+ 68006 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NINL-GINS1 NINL chr20 25507044 - GINS1 chr20 25397740 + Exonic hg19 LUSC TCGA-77-7465-01A 20 8 Out-of-frame Intra-chr p11.21 p11.21 Seq+ 68007 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NINL-NAA20 NINL chr20 25507044 - NAA20 chr20 20007428 + Exonic hg19 PRAD TCGA-G9-6351-01A 15 14 Out-of-frame Intra-chr p11.21 p11.23 Seq+ 68008 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPAL2-RGS22 NIPAL2 chr8 99306231 - RGS22 chr8 100977658 - Exonic hg19 STAD TCGA-VQ-A8DZ-01A 3 15 In-Frame Intra-chr q22.2 q22.2 Seq+ 68009 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPAL2-RNF19A NIPAL2 chr8 99215336 - RNF19A chr8 101325600 - Exonic hg19 BRCA TCGA-BH-A1FD-01A 11 1 CDS-5'UTR Intra-chr q22.2 q22.2 Seq+ 68010 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPAL3-GRHL3 NIPAL3 chr1 24771734 - GRHL3 chr1 24657916 + Exonic hg19 CESC TCGA-DS-A1O9-01A 13 9 Out-of-frame Intra-chr p36.11 p36.11 Transcription factor Seq+ 68011 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPAL3-GRHL3 NIPAL3 chr1 24779994 - GRHL3 chr1 24690675 + Exonic hg19 HNSC TCGA-HD-8314-01A 53 41 Out-of-frame Intra-chr p36.11 p36.11 Transcription factor Seq+ 68012 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPAL3-PPP4R1 NIPAL3 chr1 24790610 - PPP4R1 chr18 9547950 - Exonic hg19 BLCA TCGA-XF-AAMY-01A 9 1 In-Frame Inter-chr p36.11 p11.22 68013 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPBL-ANKRD17 NIPBL chr5 37010327 - ANKRD17 chr4 74043250 - Exonic hg19 BRCA TCGA-A2-A0T1-01A 10 4 In-Frame Inter-chr p13.2 q13.3 Seq+ 68014 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPBL-ARNTL2 NIPBL chr5 36972143 - ARNTL2 chr12 27521195 + Exonic hg19 READ TCGA-AG-3731-01A 7 4 In-Frame Inter-chr p13.2 p11.23 Transcription factor Seq+ 68015 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPBL-ATP2A2 NIPBL chr5 36877280 - ATP2A2 chr12 110720409 + Exonic hg19 LUAD TCGA-95-7043-01A 5 10 5'UTR-CDS Inter-chr p13.2 q24.11 Seq+ 68016 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPBL-BASP1 NIPBL chr5 37001180 - BASP1 chr5 17275317 + Exonic hg19 SKCM TCGA-EE-A20I-06A 15 9 CDS-5'UTR Intra-chr p13.2 p15.1 Tumor suppressor gene Seq+ 68017 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPBL-C5orf42 NIPBL chr5 36962376 - C5orf42 chr5 37115151 - Exonic hg19 ESCA TCGA-L5-A8NI-01A 3 40 In-Frame Intra-chr p13.2 p13.2 Seq+ 68018 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPBL-CLSPN NIPBL chr5 36877280 - CLSPN chr1 36230927 - Exonic hg19 BRCA TCGA-A7-A13D-01B 2 3 5'UTR-CDS Inter-chr p13.2 p34.3 Seq+ 68019 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPBL-FGF10 NIPBL chr5 36962376 - FGF10 chr5 44310632 - Exonic hg19 LUSC TCGA-22-4595-01A 66 24 In-Frame Intra-chr p13.2 p12 Seq+ 68020 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPBL-L3MBTL4 NIPBL chr5 36877280 - L3MBTL4 chr18 6171941 - Exonic hg19 SARC TCGA-DX-AB2W-01A 3 3 5'UTR-CDS Inter-chr p13.2 p11.31 Tumor suppressor gene Transcription factor Seq+ 68021 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPBL-MAPRE1 NIPBL chr5 36877280 - MAPRE1 chr20 31413731 + Exonic hg19 LUSC TCGA-77-8153-01A 31 19 5'UTR-5'UTR Inter-chr p13.2 q11.21 Seq+ 68022 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPBL-MRPS30 NIPBL chr5 36877280 - MRPS30 chr5 44811111 + Exonic hg19 BLCA TCGA-ZF-AA4V-01A 4 4 5'UTR-CDS Intra-chr p13.2 p12 Seq+ 68023 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPBL-MYO10 NIPBL chr5 37010327 - MYO10 chr5 16877816 - Exonic hg19 LUAD TCGA-05-4426-01A 16 15 In-Frame Intra-chr p13.2 p15.1 Seq+ 68024 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPBL-NACC1 NIPBL chr5 36972143 - NACC1 chr19 13246014 + Exonic hg19 CHOL TCGA-ZH-A8Y6-01A 57 40 CDS-5'UTR Inter-chr p13.2 p13.13 Seq+ 68025 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPBL-NUP155 NIPBL chr5 36877280 - NUP155 chr5 37309369 - Exonic hg19 SKCM TCGA-D3-A1Q3-06A 40 33 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 68026 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPBL-SLC1A3 NIPBL chr5 36877280 - SLC1A3 chr5 36671131 + Exonic hg19 LUAD TCGA-50-5946-01A 40 18 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 68027 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPBL-SLC1A3 NIPBL chr5 36877280 - SLC1A3 chr5 36608431 + Exonic hg19 SKCM TCGA-EE-A2MJ-06A 5 1 5'UTR-5'UTR Intra-chr p13.2 p13.2 Seq+ 68028 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPBL-SLC30A9 NIPBL chr5 36877280 - SLC30A9 chr4 42062208 + Exonic hg19 BRCA TCGA-A7-A6VV-01A 53 44 5'UTR-CDS Inter-chr p13.2 p13 Seq+ 68029 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPBL-SPEF2 NIPBL chr5 36877280 - SPEF2 chr5 35753726 + Exonic hg19 UCEC TCGA-AX-A3G4-01A 7 3 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 68030 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPBL-SPEF2 NIPBL chr5 36958333 - SPEF2 chr5 35753726 + Exonic hg19 HNSC TCGA-CV-7418-01A 11 6 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 68031 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPBL-SPEF2 NIPBL chr5 36976504 - SPEF2 chr5 35628562 + Exonic hg19 SARC TCGA-DX-A8BM-01A 2 5 In-Frame Intra-chr p13.2 p13.2 Seq+ 68032 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPBL-SPEF2 NIPBL chr5 36877280 - SPEF2 chr5 35659121 + Exonic hg19 BLCA TCGA-FJ-A3Z7-01A 3 5 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 68033 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPBL-SPEF2 NIPBL chr5 37046301 - SPEF2 chr5 35641533 + Exonic hg19 SKCM TCGA-GN-A264-06A 5 4 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 68034 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPBL-SPEF2 NIPBL chr5 36877280 - SPEF2 chr5 35800070 + Exonic hg19 UCS TCGA-NF-A4WX-01A 138 87 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 68035 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPBL-STK24 NIPBL chr5 36877280 - STK24 chr13 99171727 - Exonic hg19 LUSC TCGA-63-A5MW-01A 22 24 5'UTR-CDS Inter-chr p13.2 q32.2 Seq+ 68036 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIPSNAP3A-TMEFF1 NIPSNAP3A chr9 107510133 - TMEFF1 chr9 103310026 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 13 4 Out-of-frame Intra-chr q31.1 q31.1 Tumor suppressor gene Seq+ 68037 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NISCH-DNAH1 NISCH chr3 52492860 - DNAH1 chr3 52413921 + Exonic hg19 ESCA TCGA-L5-A8NI-01A 2 21 In-Frame Intra-chr p21.1 p21.1 Seq+ 68038 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NISCH-PBRM1 NISCH chr3 52524849 - PBRM1 chr3 52643971 - Exonic hg19 BLCA TCGA-FD-A3SN-01A 4 2 In-Frame Intra-chr p21.1 p21.1 Oncogene Tumor suppressor gene Seq+ 68039 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIT1-C12orf5 NIT1 chr1 161090022 - C12orf5 chr12 4458985 + Exonic hg19 SARC TCGA-DX-A240-01A 3 4 In-Frame Inter-chr q23.3 68040 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIT1-C1orf105 NIT1 chr1 161090022 - C1orf105 chr1 172431318 + Exonic hg19 SARC TCGA-DX-AB2S-01A 172 180 In-Frame Intra-chr q23.3 q24.3 Seq+ 68041 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NIT2-C3orf26 NIT2 chr3 100053642 - C3orf26 chr3 99865817 + Exonic hg19 HNSC TCGA-P3-A6T8-01A 10 2 In-Frame Intra-chr q12.2 Tumor suppressor gene 68042 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NKAIN1-PFAS NKAIN1 chr1 31712341 - PFAS chr17 8157484 + Exonic hg19 LUAD TCGA-62-8394-01A 2 1 Out-of-frame Inter-chr p35.2 p13.1 Seq+ 68043 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NKAIN2-MS4A12 NKAIN2 chr6 124979532 - MS4A12 chr11 60264786 + Exonic hg19 LUSC TCGA-33-6737-01A 51 29 CDS-5'UTR Inter-chr q22.31 q12.2 Seq+ 68044 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NKAIN3-SLCO5A1 NKAIN3 chr8 63659688 - SLCO5A1 chr8 70650439 - Exonic hg19 BRCA TCGA-E2-A14Y-01A 2 3 Out-of-frame Intra-chr q12.3 q13.3 68045 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NKAIN3-TOX NKAIN3 chr8 63161686 - TOX chr8 59720828 - Exonic hg19 SKCM TCGA-WE-AAA3-06A 9 2 In-Frame Intra-chr q12.3 q12.1 Seq+ 68046 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NKAIN3-WRN NKAIN3 chr8 63161686 - WRN chr8 31030511 + Exonic hg19 UCS TCGA-N5-A4RT-01A 3 1 In-Frame Intra-chr q12.3 p12 Oncogene Seq+ 68047 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NKD1-ADCY7 NKD1 chr16 50583466 - ADCY7 chr16 50321823 + Exonic hg19 STAD TCGA-BR-8678-01A 43 98 CDS-3'UTR Intra-chr q12.1 q12.1 Seq+ 68048 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NKD1-C21orf56 NKD1 chr16 50583466 - C21orf56 chr21 47588572 - Exonic hg19 SARC TCGA-X9-A971-01A 31 10 Out-of-frame Inter-chr q12.1 68049 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NKD2-KIAA0947 NKD2 chr5 1009675 - KIAA0947 chr5 5454665 + Exonic hg19 UCEC TCGA-AX-A3FZ-01A 4 5 Out-of-frame Intra-chr Seq+ 68050 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NKRF-UBE2A NKRF chrX 118726346 - UBE2A chrX 118715470 + Exonic hg19 BRCA TCGA-D8-A1JK-01A 11 3 In-Frame Intra-chr q24 Transcription factor q24 Seq+ 68051 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NKX2-1-SLC25A21 NKX2-1 chr14 36988190 - SLC25A21 chr14 37153085 - Exonic hg19 LUSC TCGA-39-5034-01A 4 7 Out-of-frame Intra-chr q13.3 q13.3 68052 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NKX3-1-SEC63 NKX3-1 chr8 23536206 - SEC63 chr6 108214782 - Exonic hg19 PRAD TCGA-EJ-5519-01A 2 1 Out-of-frame Inter-chr p21.2 Tumor suppressor gene q21 68053 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NLE1-BAIAP2 NLE1 chr17 33468998 - BAIAP2 chr17 79027468 + Exonic hg19 BRCA TCGA-BH-A0BJ-01A 2 1 In-Frame Intra-chr q12 q25.3 Seq+ 68054 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NLE1-FNDC8 NLE1 chr17 33466254 - FNDC8 chr17 33454061 + Exonic hg19 HNSC TCGA-DQ-7591-01A 46 28 Out-of-frame Intra-chr q12 q12 Seq+ 68055 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NLGN1-CCDC50 NLGN1 chr3 173525622 - CCDC50 chr3 191074877 + Exonic hg19 MESO TCGA-TS-A8AI-01A 3 3 In-Frame Intra-chr q26.31 q28 68056 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NLGN1-SEMA5B NLGN1 chr3 173525622 - SEMA5B chr3 122632271 - Exonic hg19 SKCM TCGA-EE-A2M6-06A 3 1 Out-of-frame Intra-chr q26.31 q21.1 68057 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NLGN4X-DMD NLGN4X chrX 5947321 - DMD chrX 31792309 - Exonic hg19 UCEC TCGA-BK-A26L-01A 10 17 In-Frame Intra-chr p22.31 p21.1 Tumor suppressor gene Seq+ 68058 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NLGN4Y-CYorf15A NLGN4Y chrY 16636816 - CYorf15A chrY 21749096 + Exonic hg19 SKCM TCGA-ER-A19T-01A 5 1 Out-of-frame Intra-chr q11.221 68059 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NLGN4Y-SHISA6 NLGN4Y chrY 16835149 - SHISA6 chr17 11459057 + Exonic hg19 SARC TCGA-DX-A48U-01A 6 3 In-Frame Inter-chr q11.221 p12 68060 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NLK-BCAS3 NLK chr17 26495683 - BCAS3 chr17 59067332 + Exonic hg19 BRCA TCGA-C8-A26X-01A 12 24 In-Frame Intra-chr q11.2 CMGC:MAPK q23.2 Seq+ 68061 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NLK-DOK5 NLK chr17 26495683 - DOK5 chr20 53171472 + Exonic hg19 BRCA TCGA-3C-AALJ-01A 3 2 In-Frame Inter-chr q11.2 CMGC:MAPK q13.2 68062 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NLK-DUSP14 NLK chr17 26370357 - DUSP14 chr17 35870779 + Exonic hg19 BRCA TCGA-EW-A6S9-01A 4 1 CDS-5'UTR Intra-chr q11.2 CMGC:MAPK q12 Seq+ 68063 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NLK-ELMO1 NLK chr17 26449758 - ELMO1 chr7 37172839 - Exonic hg19 LGG TCGA-FG-A70Z-01A 2 2 In-Frame Inter-chr q11.2 CMGC:MAPK p14.1 Seq+ 68064 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NLK-KALRN NLK chr17 26512291 - KALRN chr3 124281690 + Exonic hg19 KIRC TCGA-BP-4798-01A 4 7 In-Frame Inter-chr q11.2 CMGC:MAPK q21.1 Seq+ 68065 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NLK-KSR1 NLK chr17 26512291 - KSR1 chr17 25904518 + Exonic hg19 STAD TCGA-BR-4357-01A 2 13 CDS-5'UTR Intra-chr q11.2 CMGC:MAPK q11.2 TKL:RAF 68066 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NLK-NF1 NLK chr17 26370357 - NF1 chr17 29687505 + Exonic hg19 LUAD TCGA-69-7764-01A 20 11 Out-of-frame Intra-chr q11.2 CMGC:MAPK q11.2 Oncogene Tumor suppressor gene Seq+ 68067 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NLK-RAD51D NLK chr17 26370357 - RAD51D chr17 33433500 - Exonic hg19 HNSC TCGA-CV-5434-01A 8 2 Out-of-frame Intra-chr q11.2 CMGC:MAPK q12 Seq+ 68068 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NLK-SMURF2 NLK chr17 26370357 - SMURF2 chr17 62542456 - Exonic hg19 BLCA TCGA-ZF-A9RM-01A 2 1 Out-of-frame Intra-chr q11.2 CMGC:MAPK q24.1 68069 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NLRC5-CYB5B NLRC5 chr16 57051100 - CYB5B chr16 69492996 + Exonic hg19 HNSC TCGA-D6-8568-01A 47 19 5'UTR-CDS Intra-chr q13 q22.1 Seq+ 68070 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NLRC5-FTO NLRC5 chr16 57080553 - FTO chr16 54145674 + Exonic hg19 ESCA TCGA-2H-A9GH-01A 6 33 In-Frame Intra-chr q13 q12.2 Seq+ 68071 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NLRC5-NUP93 NLRC5 chr16 57056227 - NUP93 chr16 56878411 + Exonic hg19 ACC TCGA-PK-A5HA-01A 16 3 Out-of-frame Intra-chr q13 q13 Seq+ 68072 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NMD3-USP40 NMD3 chr3 160953000 - USP40 chr2 234407258 - Exonic hg19 LIHC TCGA-ZS-A9CF-01A 20 11 In-Frame Inter-chr q26.1 q37.1 Seq+ 68073 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NMD3-USP40 NMD3 chr3 160953000 - USP40 chr2 234407258 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 54 41 In-Frame Inter-chr q26.1 q37.1 Seq+ 68074 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NME6-NT5DC2 NME6 chr3 48341921 - NT5DC2 chr3 52563350 - Exonic hg19 MESO TCGA-MQ-A4LM-01A 2 1 Out-of-frame Intra-chr p21.31 p21.1 68075 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NME6-SPINK8 NME6 chr3 48338217 - SPINK8 chr3 48351436 - Exonic hg19 CESC TCGA-C5-A1M6-01A 295 150 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 68076 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NME7-ASH1L NME7 chr1 169292355 - ASH1L chr1 155491409 - Exonic hg19 PRAD TCGA-EJ-5518-01A 4 3 CDS-5'UTR Intra-chr q24.2 q22 Transcription factor 68077 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NME7-C1orf114 NME7 chr1 169336946 - C1orf114 chr1 169394188 - Exonic hg19 SARC TCGA-DX-A1KU-01A 4 3 5'UTR-5'UTR Intra-chr q24.2 68078 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NME7-KMO NME7 chr1 169199956 - KMO chr1 241749981 + Exonic hg19 PRAD TCGA-VP-A87D-01A 2 1 In-Frame Intra-chr q24.2 q43 Seq+ 68079 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NME7-MKLN1 NME7 chr1 169336946 - MKLN1 chr7 131060183 + Exonic hg19 SARC TCGA-DX-A1L2-01A 7 3 Out-of-frame Inter-chr q24.2 q32.3 68080 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NMI-SLC9A4 NMI chr2 152138462 - SLC9A4 chr2 103125306 + Exonic hg19 UCEC TCGA-KP-A3W1-01A 3 2 In-Frame Intra-chr q23.3 q12.1 68081 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NMNAT2-ATF6 NMNAT2 chr1 183387318 - ATF6 chr1 161748034 + Exonic hg19 LGG TCGA-DU-6542-01A 7 4 In-Frame Intra-chr q25.3 q23.3 Transcription factor Seq+ 68082 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NMNAT3-CCDC50 NMNAT3 chr3 139346458 - CCDC50 chr3 191074877 + Exonic hg19 LIHC TCGA-BC-A10W-01A 8 7 In-Frame Intra-chr q23 q28 Seq+ 68083 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NMNAT3-PLA1A NMNAT3 chr3 139346458 - PLA1A chr3 119336866 + Exonic hg19 SKCM TCGA-EE-A2M6-06A 3 2 In-Frame Intra-chr q23 q13.33 Seq+ 68084 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NMNAT3-RP11-392O18.1 NMNAT3 chr3 139396547 - RP11-392O18.1 chr3 150340172 + Exonic hg19 SKCM TCGA-D3-A3BZ-06A 5 1 Out-of-frame Intra-chr q23 68085 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NMT1-HIGD1B NMT1 chr17 43138828 - HIGD1B chr17 42926622 + Exonic hg19 KIRP TCGA-2Z-A9J3-01A 46 6 Out-of-frame Intra-chr q21.31 q21.31 Seq+ 68086 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NMT1-NME1-NME2 NMT1 chr17 43138828 - NME1-NME2 chr17 49233012 + Exonic hg19 LUSC TCGA-43-2581-01A 66 12 Out-of-frame Intra-chr q21.31 q21.33 Tumor suppressor gene 68087 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NMUR1-PDE6D NMUR1 chr2 232395070 - PDE6D chr2 232603912 - Exonic hg19 BRCA TCGA-AR-A1AI-01A 2 5 Out-of-frame Intra-chr q37.1 q37.1 Seq+ 68088 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NNT-AC114947.1 NNT chr5 43628489 - AC114947.1 chr5 43277159 + Exonic hg19 OV TCGA-24-1552-01A 5 3 Out-of-frame Intra-chr p12 p12 68089 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NNT-PRLR NNT chr5 43628489 - PRLR chr5 35072846 - Exonic hg19 COAD TCGA-D5-6924-01A 2 2 In-Frame Intra-chr p12 p13.2 Seq+ 68090 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOC2L-LRRC38 NOC2L chr1 889162 - LRRC38 chr1 13802567 - Exonic hg19 SARC TCGA-3B-A9HS-01A 6 3 Out-of-frame Intra-chr p36.33 p36.21 68091 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOC2L-TCEB3 NOC2L chr1 891303 - TCEB3 chr1 24086002 + Exonic hg19 BLCA TCGA-XF-A9SV-01A 4 2 Out-of-frame Intra-chr p36.33 Tumor suppressor gene 68092 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOC4L-SDS NOC4L chr12 132629150 - SDS chr12 113837515 - Exonic hg19 GBM TCGA-06-0129-01A 7 9 CDS-5'UTR Intra-chr q24.33 q24.13 Seq+ 68093 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOC4L-STAB2 NOC4L chr12 132633440 - STAB2 chr12 104142741 + Exonic hg19 LUSC TCGA-34-5232-01A 20 10 In-Frame Intra-chr q24.33 q23.3 Seq+ 68094 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOL10-ROCK2 NOL10 chr2 10824693 - ROCK2 chr2 11323566 - Exonic hg19 STAD TCGA-BR-8590-01A 2 7 Out-of-frame Intra-chr p25.1 p25.1 AGC:DMPK Seq+ 68095 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOL11-CARD11 NOL11 chr17 65733261 - CARD11 chr7 2979562 - Exonic hg19 BRCA TCGA-BH-A0B3-01A 3 7 In-Frame Inter-chr q24.2 p22.2 Oncogene Seq+ 68096 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOL11-HSF5 NOL11 chr17 65739702 - HSF5 chr17 56499791 - Exonic hg19 BRCA TCGA-AO-A0J5-01A 2 5 Out-of-frame Intra-chr q24.2 q22 Transcription factor Seq+ 68097 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOL7-ERVFRD-1 NOL7 chr6 13618033 - ERVFRD-1 chr6 11105863 - Exonic hg19 BRCA TCGA-A2-A0CX-01A 191 91 Out-of-frame Intra-chr p23 Tumor suppressor gene p24.2 68098 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOL8-FXN NOL8 chr9 95076549 - FXN chr9 71661301 + Exonic hg19 TGCT TCGA-2G-AAM4-01A 5 3 In-Frame Intra-chr q22.31 q21.11 Tumor suppressor gene Seq+ 68099 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOL9-DNAJC11 NOL9 chr1 6609631 - DNAJC11 chr1 6714099 - Exonic hg19 LUSC TCGA-77-A5GH-01A 5 6 In-Frame Intra-chr p36.31 p36.31 Tumor suppressor gene Seq+ 68100 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOL9-DNAJC11 NOL9 chr1 6614167 - DNAJC11 chr1 6741097 - Exonic hg19 HNSC TCGA-CV-7253-01A 22 12 In-Frame Intra-chr p36.31 p36.31 Tumor suppressor gene Seq+ 68101 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOL9-ESPN NOL9 chr1 6601890 - ESPN chr1 6517244 + Exonic hg19 UCEC TCGA-H5-A2HR-01A 9 8 Out-of-frame Intra-chr p36.31 p36.31 Seq+ 68102 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOLC1-HTR7 NOLC1 chr10 103912287 - HTR7 chr10 92509351 - Exonic hg19 UCS TCGA-NG-A4VU-01A 19 1 Out-of-frame Intra-chr q24.32 q23.31 68103 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOM1-RNF32 NOM1 chr7 156746992 - RNF32 chr7 156468390 + Exonic hg19 ESCA TCGA-L5-A4OS-01A 21 100 In-Frame Intra-chr q36.3 q36.3 Seq+ 68104 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOM1-UVRAG NOM1 chr7 156743418 - UVRAG chr11 75776754 + Exonic hg19 SARC TCGA-JV-A75J-01A 10 9 Out-of-frame Inter-chr q36.3 q13.5 Tumor suppressor gene Seq+ 68105 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOP14-LYAR NOP14 chr4 2951661 - LYAR chr4 4288299 - Exonic hg19 LIHC TCGA-EP-A2KA-01A 4 3 CDS-5'UTR Intra-chr p16.3 p16.3 68106 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOP2-C12orf53 NOP2 chr12 6676982 - C12orf53 chr12 6807270 - Exonic hg19 LIHC TCGA-BC-A8YO-01A 35 16 CDS-5'UTR Intra-chr p13.31 68107 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOP58-AC079354.1 NOP58 chr2 203130709 - AC079354.1 chr2 203019396 + Exonic hg19 LUAD TCGA-55-A493-01A 2 2 Out-of-frame Intra-chr q33.1 q33.1 68108 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOP58-AC079354.1 NOP58 chr2 203155993 - AC079354.1 chr2 203058024 + Exonic hg19 LUSC TCGA-77-A5GH-01A 2 2 Out-of-frame Intra-chr q33.1 q33.1 68109 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOS1-UBC NOS1 chr12 117723046 - UBC chr12 125399308 - Exonic hg19 SKCM TCGA-EB-A44Q-06A 6 7 CDS-5'UTR Intra-chr q24.22 q24.31 Seq+ 68110 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOS1AP-AHI1 NOS1AP chr1 162124266 - AHI1 chr6 135679325 - Exonic hg19 BLCA TCGA-E7-A541-01A 4 2 Out-of-frame Inter-chr q23.3 q23.3 Seq+ 68111 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOS1AP-ATF6 NOS1AP chr1 162040072 - ATF6 chr1 161928236 + Exonic hg19 UCEC TCGA-DF-A2KR-01A 34 18 Out-of-frame Intra-chr q23.3 q23.3 Transcription factor Seq+ 68112 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOS1AP-ATF6 NOS1AP chr1 162257226 - ATF6 chr1 161789423 + Exonic hg19 UCEC TCGA-FI-A3PX-01A 14 6 In-Frame Intra-chr q23.3 q23.3 Transcription factor Seq+ 68113 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOS1AP-ATF6 NOS1AP chr1 162040072 - ATF6 chr1 161928236 + Exonic hg19 LUAD TCGA-NJ-A4YF-01A 3 1 Out-of-frame Intra-chr q23.3 q23.3 Transcription factor Seq+ 68114 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOS1AP-C1orf129 NOS1AP chr1 162302915 - C1orf129 chr1 170983258 + Exonic hg19 BRCA TCGA-A2-A0YG-01A 32 17 In-Frame Intra-chr q23.3 68115 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOS1AP-DCAF6 NOS1AP chr1 162124266 - DCAF6 chr1 168012263 + Exonic hg19 BRCA TCGA-BH-A8FY-01A 11 5 Out-of-frame Intra-chr q23.3 q24.2 Seq+ 68116 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOS1AP-F5 NOS1AP chr1 162313766 - F5 chr1 169484864 - Exonic hg19 LUAD TCGA-78-7146-01A 2 1 Out-of-frame Intra-chr q23.3 q24.2 Seq+ 68117 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOS1AP-GLT25D2 NOS1AP chr1 162124266 - GLT25D2 chr1 183913457 - Exonic hg19 BRCA TCGA-AO-A0J3-01A 5 5 In-Frame Intra-chr q23.3 Seq+ 68118 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOS1AP-LRRC52 NOS1AP chr1 162124266 - LRRC52 chr1 165532742 + Exonic hg19 BLCA TCGA-DK-A3IK-01A 6 7 Out-of-frame Intra-chr q23.3 q24.1 Seq+ 68119 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOS1AP-PBX1 NOS1AP chr1 162040072 - PBX1 chr1 164532475 + Exonic hg19 STAD TCGA-CG-4460-01A 5 9 Out-of-frame Intra-chr q23.3 q23.3 Oncogene Transcription factor 68120 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOS2-MYO18A NOS2 chr17 26125726 - MYO18A chr17 27449271 - Exonic hg19 ESCA TCGA-L5-A4OH-01A 2 9 Out-of-frame Intra-chr q11.2 q11.2 Oncogene Seq+ 68121 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOSIP-RCN3 NOSIP chr19 50063191 - RCN3 chr19 50040290 + Exonic hg19 UCS TCGA-N9-A4PZ-01A 30 9 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 68122 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOTCH1-HNF1B NOTCH1 chr9 139397634 - HNF1B chr17 36093736 - Exonic hg19 KIRP TCGA-BQ-7053-01A 279 180 In-Frame Inter-chr q34.3 Oncogene Tumor suppressor gene q12 Transcription factor Seq+ 68123 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOTCH1-LCN10 NOTCH1 chr9 139438476 - LCN10 chr9 139634500 - Exonic hg19 UCEC TCGA-B5-A3S1-01A 3 2 Out-of-frame Intra-chr q34.3 Oncogene Tumor suppressor gene q34.3 68124 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOTCH1-MAPK1 NOTCH1 chr9 139405604 - MAPK1 chr22 22143097 - Exonic hg19 HNSC TCGA-CN-A498-01A 9 2 Out-of-frame Inter-chr q34.3 Oncogene Tumor suppressor gene q11.22 Oncogene Seq+ 68125 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOTCH1-UHRF1BP1L NOTCH1 chr9 139408962 - UHRF1BP1L chr12 100463947 - Exonic hg19 SARC TCGA-DX-A6BG-01A 2 1 Out-of-frame Inter-chr q34.3 Oncogene Tumor suppressor gene q23.1 68126 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOTCH2-CWH43 NOTCH2 chr1 120506197 - CWH43 chr4 49032842 + Exonic hg19 LUSC TCGA-33-A4WN-01A 5 4 In-Frame Inter-chr p12 Oncogene Tumor suppressor gene p11 Seq+ 68127 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOTCH2-MNDA NOTCH2 chr1 120478095 - MNDA chr1 158815377 + Exonic hg19 OV TCGA-24-1474-01A 132 21 Out-of-frame Intra-chr p12 Oncogene Tumor suppressor gene q23.1 Seq+ 68128 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOTCH2-PSMA5 NOTCH2 chr1 120611948 - PSMA5 chr1 109964548 - Exonic hg19 OV TCGA-36-1574-01A 31 7 Out-of-frame Intra-chr p12 Oncogene Tumor suppressor gene p13.3 Seq+ 68129 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOTCH2-SPAG17 NOTCH2 chr1 120611948 - SPAG17 chr1 118524024 - Exonic hg19 HNSC TCGA-CQ-7065-01A 8 28 In-Frame Intra-chr p12 Oncogene Tumor suppressor gene p12 Seq+ 68130 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOTCH2NL-UBE2H NOTCH2NL chr1 145209436 - UBE2H chr7 129498781 - Exonic hg19 OV TCGA-25-1323-01A 9 12 5'UTR-5'UTR Inter-chr q21.1 q32.2 Seq+ 68131 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOTCH2NL-UCK2 NOTCH2NL chr1 145209436 - UCK2 chr1 165859441 + Exonic hg19 SKCM TCGA-DA-A1IA-06A 4 10 5'UTR-CDS Intra-chr q21.1 q24.1 Seq+ 68132 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOTCH3-BRD4 NOTCH3 chr19 15299800 - BRD4 chr19 15360101 - Exonic hg19 UCEC TCGA-B5-A0JN-01A 3 3 In-Frame Intra-chr p13.12 Oncogene Tumor suppressor gene p13.12 Atypical:BRD Seq+ 68133 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOTCH3-BRD4 NOTCH3 chr19 15308311 - BRD4 chr19 15360101 - Exonic hg19 CESC TCGA-HM-A6W2-01A 17 8 Out-of-frame Intra-chr p13.12 Oncogene Tumor suppressor gene p13.12 Atypical:BRD Seq+ 68134 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOTCH3-C3 NOTCH3 chr19 15270445 - C3 chr19 6720693 - Exonic hg19 BRCA TCGA-B6-A402-01A 2 1 Out-of-frame Intra-chr p13.12 Oncogene Tumor suppressor gene p13.3 68135 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOTCH3-CACNA1A NOTCH3 chr19 15308311 - CACNA1A chr19 13482593 - Exonic hg19 SARC TCGA-FX-A3NK-01A 2 6 In-Frame Intra-chr p13.12 Oncogene Tumor suppressor gene p13.13 Seq+ 68136 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOTCH3-SPECC1 NOTCH3 chr19 15297689 - SPECC1 chr17 20107646 + Exonic hg19 READ TCGA-F5-6810-01A 10 8 In-Frame Inter-chr p13.12 Oncogene Tumor suppressor gene p11.2 Seq+ 68137 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOTCH3-UBTF NOTCH3 chr19 15270445 - UBTF chr17 42288699 - Exonic hg19 LUSC TCGA-98-A53I-01A 2 1 3'UTR-3'UTR Inter-chr p13.12 Oncogene Tumor suppressor gene q21.31 68138 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOV-ENPP2 NOV chr8 120431585 - ENPP2 chr8 120606100 - Exonic hg19 ESCA TCGA-JY-A6FD-01A 51 277 In-Frame Intra-chr q24.12 Tumor suppressor gene q24.12 Seq+ 68139 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOVA1-FAM190A NOVA1 chr14 27064616 - FAM190A chr4 92519723 + Exonic hg19 BLCA TCGA-LT-A5Z6-01A 2 2 Out-of-frame Inter-chr q12 68140 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NOVA2-LEUTX NOVA2 chr19 46464268 - LEUTX chr19 40275167 + Exonic hg19 LGG TCGA-DU-8166-01A 22 18 CDS-5'UTR Intra-chr q13.32 Transcription factor Seq+ 68141 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPAS2-GNLY NPAS2 chr2 101565942 - GNLY chr2 85922443 + Exonic hg19 PRAD TCGA-KC-A7FA-01A 6 7 In-Frame Intra-chr q11.2 Tumor suppressor gene Transcription factor p11.2 Seq+ 68142 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPAS2-PACSIN2 NPAS2 chr2 101521248 - PACSIN2 chr22 43284804 - Exonic hg19 ESCA TCGA-VR-A8EY-01A 13 52 Out-of-frame Inter-chr q11.2 Tumor suppressor gene Transcription factor q13.2 Seq+ 68143 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPAS3-AKAP6 NPAS3 chr14 33525200 - AKAP6 chr14 33290608 + Exonic hg19 OV TCGA-25-1326-01A 2 3 Out-of-frame Intra-chr q13.1 Transcription factor q12 68144 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPAS3-AKAP6 NPAS3 chr14 33408572 - AKAP6 chr14 33147517 + Exonic hg19 LUAD TCGA-55-7913-01B 4 3 Out-of-frame Intra-chr q13.1 Transcription factor q12 68145 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPAT-OAF NPAT chr11 108093227 - OAF chr11 120096370 + Exonic hg19 SARC TCGA-QQ-A5VA-01A 65 17 Out-of-frame Intra-chr q22.3 q23.3 Seq+ 68146 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPC1-ANKRD29 NPC1 chr18 21131591 - ANKRD29 chr18 21214113 - Exonic hg19 UCEC TCGA-AX-A3G4-01A 2 1 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 68147 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPC1-FGD4 NPC1 chr18 21124924 - FGD4 chr12 32751431 + Exonic hg19 LUAD TCGA-05-4395-01A 13 9 In-Frame Inter-chr q11.2 p11.21 Seq+ 68148 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPC1-OSBPL1A NPC1 chr18 21113319 - OSBPL1A chr18 21957499 - Exonic hg19 UCEC TCGA-AJ-A3NH-01A 2 1 CDS-5'UTR Intra-chr q11.2 q11.2 68149 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPC1-OSBPL1A NPC1 chr18 21113319 - OSBPL1A chr18 21883682 - Exonic hg19 PRAD TCGA-EJ-5524-01A 2 2 Out-of-frame Intra-chr q11.2 q11.2 68150 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPC2-RAD51B NPC2 chr14 74959896 - RAD51B chr14 68878141 + Exonic hg19 BRCA TCGA-A2-A0YT-01A 17 7 In-Frame Intra-chr q24.3 q24.1 Seq+ 68151 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPEPL1-DSN1 NPEPL1 chr20 57269648 - DSN1 chr20 35384232 - Exonic hg19 LUSC TCGA-66-2782-01A 3 3 Out-of-frame Intra-chr q13.32 q11.23 68152 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPHP3-LSAMP NPHP3 chr3 132400758 - LSAMP chr3 115738487 - Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 20 3 Out-of-frame Intra-chr q22.1 q13.31 Tumor suppressor gene Seq+ 68153 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPHP4-ACOT7 NPHP4 chr1 6052304 - ACOT7 chr1 6355040 - Exonic hg19 LGG TCGA-DU-6395-01A 11 3 5'UTR-CDS Intra-chr p36.31 p36.31 Seq+ 68154 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPHP4-ACOT7 NPHP4 chr1 6038330 - ACOT7 chr1 6341346 - Exonic hg19 STAD TCGA-VQ-A91N-01A 2 18 Out-of-frame Intra-chr p36.31 p36.31 Seq+ 68155 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPHP4-CDKN2A NPHP4 chr1 6046215 - CDKN2A chr9 21971207 - Exonic hg19 SKCM TCGA-EE-A20H-06A 85 75 In-Frame Inter-chr p36.31 p21.3 Oncogene Tumor suppressor gene Seq+ 68156 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPHP4-FAM71B NPHP4 chr1 6007164 - FAM71B chr5 156590669 - Exonic hg19 STAD TCGA-VQ-A91S-01A 2 6 In-Frame Inter-chr p36.31 q33.3 Seq+ 68157 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPLOC4-AC087491.2 NPLOC4 chr17 79603942 - AC087491.2 chr17 37778097 + Exonic hg19 BRCA TCGA-A8-A07B-01A 2 11 Out-of-frame Intra-chr q25.3 68158 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPLOC4-C17orf90 NPLOC4 chr17 79596751 - C17orf90 chr17 79632614 - Exonic hg19 CESC TCGA-FU-A5XV-01A 8 4 In-Frame Intra-chr q25.3 68159 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPLOC4-P4HB NPLOC4 chr17 79596751 - P4HB chr17 79805223 - Exonic hg19 LUSC TCGA-21-1076-01A 54 52 In-Frame Intra-chr q25.3 q25.3 Seq+ 68160 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPLOC4-PDE6G NPLOC4 chr17 79567367 - PDE6G chr17 79618715 - Exonic hg19 LUSC TCGA-85-A4CN-01A 6 5 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 68161 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPLOC4-PDE6G NPLOC4 chr17 79577236 - PDE6G chr17 79618715 - Exonic hg19 LUSC TCGA-NC-A5HD-01A 2 2 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 68162 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPLOC4-THOC4 NPLOC4 chr17 79567367 - THOC4 chr17 79848696 - Exonic hg19 LIHC TCGA-FV-A496-01A 38 11 Out-of-frame Intra-chr q25.3 68163 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPM1-RAB4A NPM1 chr5 170815010 - RAB4A chr1 229422233 + Exonic hg19 BRCA TCGA-D8-A1JL-01A 181 221 In-Frame Inter-chr q35.1 Oncogene Tumor suppressor gene q42.13 Seq+ 68164 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPNT-GSTCD NPNT chr4 106819158 - GSTCD chr4 106744111 + Exonic hg19 LGG TCGA-QH-A6CV-01A 52 36 In-Frame Intra-chr q24 q24 Seq+ 68165 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPRL3-C16orf11 NPRL3 chr16 160523 - C16orf11 chr16 614674 + Exonic hg19 UCS TCGA-N5-A4RV-01A 5 1 In-Frame Intra-chr p13.3 68166 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPRL3-KIFC2 NPRL3 chr16 180521 - KIFC2 chr8 145697744 + Exonic hg19 BLCA TCGA-GV-A3QI-01A 30 2 In-Frame Inter-chr p13.3 q24.3 Seq+ 68167 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPRL3-LUC7L NPRL3 chr16 150370 - LUC7L chr16 243014 - Exonic hg19 BLCA TCGA-G2-A3VY-01A 22 8 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 68168 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPSR1-C7orf10 NPSR1 chr7 34698171 - C7orf10 chr7 40899915 + Exonic hg19 STAD TCGA-BR-7959-01A 3 12 Out-of-frame Intra-chr p14.3 68169 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPTN-CLUAP1 NPTN chr15 73879865 - CLUAP1 chr16 3580568 + Exonic hg19 BRCA TCGA-BH-A0AV-01A 275 493 In-Frame Inter-chr q24.1 p13.3 Seq+ 68170 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPTXR-PDXP NPTXR chr22 39239240 - PDXP chr22 38061562 + Exonic hg19 LGG TCGA-TM-A84J-01A 31 25 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 68171 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPY-DDX21 NPY chr7 24331484 - DDX21 chr10 70723858 + Exonic hg19 PRAD TCGA-G9-6333-01A 2 295 Out-of-frame Inter-chr p15.3 q22.1 68172 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NPY-FOXP1 NPY chr7 24331484 - FOXP1 chr3 71007472 - Exonic hg19 PRAD TCGA-G9-6354-01A 2 157 Out-of-frame Inter-chr p15.3 p13 Oncogene Tumor suppressor gene Transcription factor 68173 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NR1D2-AC106722.1 NR1D2 chr3 23987085 - AC106722.1 chr3 151986861 - Exonic hg19 LUAD TCGA-67-3774-01A 2 4 Out-of-frame Intra-chr p24.2 Transcription factor 68174 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NR1D2-UBE2E2 NR1D2 chr3 24004096 - UBE2E2 chr3 23574045 + Exonic hg19 LUAD TCGA-55-A57B-01A 4 10 In-Frame Intra-chr p24.2 Transcription factor p24.3 Seq+ 68175 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NR2C1-BCL7A NR2C1 chr12 95461107 - BCL7A chr12 122468606 + Exonic hg19 SARC TCGA-DX-A7EI-01A 18 24 Out-of-frame Intra-chr q22 Transcription factor Seq+ 68176 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NR2C2-ASCC1 NR2C2 chr3 15055296 - ASCC1 chr10 73857208 - Exonic hg19 BRCA TCGA-A8-A06Q-01A 208 135 In-Frame Inter-chr p25.1 Tumor suppressor gene Transcription factor q22.1 Seq+ 68177 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NR2C2-COLQ NR2C2 chr3 14989413 - COLQ chr3 15531144 - Exonic hg19 BRCA TCGA-BH-A18J-01A 3 10 5'UTR-CDS Intra-chr p25.1 Tumor suppressor gene Transcription factor p25.1 Seq+ 68178 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NR2C2-FGD5 NR2C2 chr3 14989413 - FGD5 chr3 14974084 + Exonic hg19 THYM TCGA-5U-AB0D-01A 3 2 5'UTR-CDS Intra-chr p25.1 Tumor suppressor gene Transcription factor p25.1 Seq+ 68179 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NR2C2-FGD5 NR2C2 chr3 14989413 - FGD5 chr3 14905635 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 3 5 5'UTR-CDS Intra-chr p25.1 Tumor suppressor gene Transcription factor p25.1 Seq+ 68180 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NR2C2-PARL NR2C2 chr3 14989413 - PARL chr3 183585848 - Exonic hg19 ESCA TCGA-R6-A6Y2-01B 18 113 5'UTR-CDS Intra-chr p25.1 Tumor suppressor gene Transcription factor q27.1 Seq+ 68181 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NR2C2AP-MAP1S NR2C2AP chr19 19312740 - MAP1S chr19 17835858 + Exonic hg19 BRCA TCGA-LD-A7W6-01A 37 14 In-Frame Intra-chr p13.11 p13.11 Seq+ 68182 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NR2F2-MSI2 NR2F2 chr15 96869581 - MSI2 chr17 55607037 + Exonic hg19 BRCA TCGA-C8-A12P-01A 47 28 Out-of-frame Inter-chr q26.2 Transcription factor q22 Seq+ 68183 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NR2F6-PLVAP NR2F6 chr19 17351480 - PLVAP chr19 17477004 - Exonic hg19 UCEC TCGA-5B-A90C-01A 9 11 Out-of-frame Intra-chr p13.11 Transcription factor p13.11 Seq+ 68184 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NR2F6-USHBP1 NR2F6 chr19 17351480 - USHBP1 chr19 17362826 - Exonic hg19 HNSC TCGA-D6-6516-01A 51 13 Out-of-frame Intra-chr p13.11 Transcription factor p13.11 68185 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NR2F6-USHBP1 NR2F6 chr19 17355752 - USHBP1 chr19 17362826 - Exonic hg19 ESCA TCGA-L5-A8NI-01A 12 97 Out-of-frame Intra-chr p13.11 Transcription factor p13.11 68186 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NR3C1-HMHB1 NR3C1 chr5 142693567 - HMHB1 chr5 143200045 + Exonic hg19 GBM TCGA-27-1831-01A 5 6 In-Frame Intra-chr q31.3 Transcription factor q31.3 Seq+ 68187 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NR3C2-SPATA17 NR3C2 chr4 149356256 - SPATA17 chr1 218036116 + Exonic hg19 CHOL TCGA-W5-AA2T-01A 15 2 Out-of-frame Inter-chr q31.23 Transcription factor q41 Seq+ 68188 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NR4A1-IL20RB NR4A1 chr12 52435713 - IL20RB chr3 136699308 + Exonic hg19 HNSC TCGA-BA-6871-01A 9 10 In-Frame Inter-chr q13.13 Tumor suppressor gene Transcription factor q22.3 Seq+ 68189 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NR4A2-GPD2 NR4A2 chr2 157187180 - GPD2 chr2 157332610 + Exonic hg19 HNSC TCGA-HD-A634-01A 12 10 5'UTR-5'UTR Intra-chr q24.1 Transcription factor q24.1 Seq+ 68190 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NR5A1-NR6A1 NR5A1 chr9 127262369 - NR6A1 chr9 127287152 - Exonic hg19 ACC TCGA-OR-A5J7-01A 38 14 Out-of-frame Intra-chr q33.3 Transcription factor q33.3 Transcription factor Seq+ 68191 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NR6A1-DEAF1 NR6A1 chr9 127533299 - DEAF1 chr11 654051 - Exonic hg19 BLCA TCGA-XF-A9SY-01A 6 2 Out-of-frame Inter-chr q33.3 Transcription factor Transcription factor Seq+ 68192 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NR6A1-GOLGA1 NR6A1 chr9 127533299 - GOLGA1 chr9 127644848 - Exonic hg19 SKCM TCGA-ER-A19T-01A 5 3 Out-of-frame Intra-chr q33.3 Transcription factor q33.3 Seq+ 68193 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NR6A1-GOLGA1 NR6A1 chr9 127495587 - GOLGA1 chr9 127701145 - Exonic hg19 CESC TCGA-VS-A9UT-01A 4 1 CDS-5'UTR Intra-chr q33.3 Transcription factor q33.3 Seq+ 68194 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRAS-CLDN14 NRAS chr1 115258671 - CLDN14 chr21 37834074 - Exonic hg19 CHOL TCGA-W6-AA0S-01A 16 11 CDS-5'UTR Inter-chr p13.2 Oncogene q22.13 Seq+ 68195 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRBF2-CYP26A1 NRBF2 chr10 64893260 - CYP26A1 chr10 94835583 + Exonic hg19 BRCA TCGA-E2-A576-01A 15 5 In-Frame Intra-chr q21.3 q23.33 Seq+ 68196 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRBP1-DROSHA NRBP1 chr2 27651598 - DROSHA chr5 31410994 - Exonic hg19 LGG TCGA-QH-A6XC-01A 70 82 5'UTR-CDS Inter-chr p23.3 Other:NRBP Tumor suppressor gene p13.3 Seq+ 68197 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRCAM-BNC2 NRCAM chr7 108096687 - BNC2 chr9 16583083 - Exonic hg19 BRCA TCGA-AC-A2QH-01B 3 3 5'UTR-CDS Inter-chr q31.1 Tumor suppressor gene p22.2 Transcription factor 68198 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRCAM-CFTR NRCAM chr7 108096687 - CFTR chr7 117305513 + Exonic hg19 LIHC TCGA-RC-A6M6-01A 25 12 5'UTR-CDS Intra-chr q31.1 Tumor suppressor gene q31.2 Tumor suppressor gene Seq+ 68199 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRCAM-TLN1 NRCAM chr7 107788096 - TLN1 chr9 35720506 - Exonic hg19 LGG TCGA-DU-6402-01A 2 1 3'UTR-CDS Inter-chr q31.1 Tumor suppressor gene p13.3 68200 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRD1-USP24 NRD1 chr1 52343947 - USP24 chr1 55573103 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 2 4 Out-of-frame Intra-chr p32.3 68201 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRD1-VPS53 NRD1 chr1 52258049 - VPS53 chr17 440416 - Exonic hg19 LGG TCGA-E1-A7YL-01A 23 13 In-Frame Inter-chr Tumor suppressor gene Seq+ 68202 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRF1-FAM40B NRF1 chr7 129297414 - FAM40B chr7 129091454 + Exonic hg19 BRCA TCGA-D8-A140-01A 8 6 In-Frame Intra-chr q32.2 Tumor suppressor gene Transcription factor Seq+ 68203 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRF1-FAM40B NRF1 chr7 129367205 - FAM40B chr7 129110490 + Exonic hg19 UCS TCGA-N6-A4VG-01A 12 8 Out-of-frame Intra-chr q32.2 Tumor suppressor gene Transcription factor Seq+ 68204 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRF1-MLXIPL NRF1 chr7 129251665 - MLXIPL chr7 73030507 - Exonic hg19 PRAD TCGA-KK-A7B4-01A 49 18 5'UTR-CDS Intra-chr q32.2 Tumor suppressor gene Transcription factor q11.23 Transcription factor Seq+ 68205 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRF1-MTMR1 NRF1 chr7 129251665 - MTMR1 chrX 149919202 + Exonic hg19 LUSC TCGA-33-4547-01A 12 15 5'UTR-CDS Inter-chr q32.2 Tumor suppressor gene Transcription factor q28 Seq+ 68206 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRF1-PPP2R5A NRF1 chr7 129357216 - PPP2R5A chr1 212502477 + Exonic hg19 PRAD TCGA-YL-A8HL-01A 5 3 Out-of-frame Inter-chr q32.2 Tumor suppressor gene Transcription factor q32.3 Seq+ 68207 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRG1-KRT78 NRG1 chr8 32406344 - KRT78 chr12 53233768 - Exonic hg19 BLCA TCGA-CF-A3MI-01A 2 5 Out-of-frame Inter-chr p12 q13.13 68208 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRG1-PMEPA1 NRG1 chr8 31498245 - PMEPA1 chr20 56234753 - Exonic hg19 UCS TCGA-ND-A4WA-01A 19 8 In-Frame Inter-chr p12 q13.31 Seq+ 68209 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRG1-PROSC NRG1 chr8 32406344 - PROSC chr8 37630273 + Exonic hg19 MESO TCGA-TS-A7P1-01A 5 1 In-Frame Intra-chr p12 68210 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRG1-STMN2 NRG1 chr8 32463201 - STMN2 chr8 80549037 + Exonic hg19 PRAD TCGA-FC-A4JI-01A 51 32 In-Frame Intra-chr p12 q21.13 Seq+ 68211 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRG2-C5orf32 NRG2 chr5 139421955 - C5orf32 chr5 139622890 + Exonic hg19 BRCA TCGA-BH-A0H9-01A 16 26 Out-of-frame Intra-chr q31.2 68212 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRG4-SCNN1D NRG4 chr15 76301541 - SCNN1D chr1 1225857 + Exonic hg19 ACC TCGA-OR-A5J1-01A 5 1 Out-of-frame Inter-chr q24.2 p36.33 Seq+ 68213 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRIP1-CSNK1G1 NRIP1 chr21 16415816 - CSNK1G1 chr15 64508912 - Exonic hg19 SARC TCGA-QC-AA9N-01A 14 15 5'UTR-CDS Inter-chr q21.1 q22.31 Seq+ 68214 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRIP1-DSCAM NRIP1 chr21 16386665 - DSCAM chr21 41455933 - Exonic hg19 SARC TCGA-DX-A6YR-01A 3 10 5'UTR-CDS Intra-chr q21.1 q22.2 Seq+ 68215 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRIP1-HIBADH NRIP1 chr21 16386665 - HIBADH chr7 27570967 - Exonic hg19 BRCA TCGA-AN-A0FZ-01A 973 714 5'UTR-CDS Inter-chr q21.1 p15.2 Seq+ 68216 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRIP1-IGSF8 NRIP1 chr21 16386665 - IGSF8 chr1 160062485 - Exonic hg19 MESO TCGA-TS-A7OZ-01A 12 14 5'UTR-CDS Inter-chr q21.1 q23.2 Seq+ 68217 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRIP1-SHCBP1 NRIP1 chr21 16386665 - SHCBP1 chr16 46642301 - Exonic hg19 BRCA TCGA-A8-A09A-01A 3 1 5'UTR-CDS Inter-chr q21.1 q11.2 68218 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRP1-CUL2 NRP1 chr10 33619636 - CUL2 chr10 35299370 - Exonic hg19 LGG TCGA-HT-7690-01A 3 3 Out-of-frame Intra-chr p11.22 p11.21 Tumor suppressor gene Seq+ 68219 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRP1-PTEN NRP1 chr10 33619636 - PTEN chr10 89717610 + Exonic hg19 PRAD TCGA-HC-A48F-01A 10 4 Out-of-frame Intra-chr p11.22 q23.31 Oncogene Tumor suppressor gene Seq+ 68220 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRP1-VSTM4 NRP1 chr10 33619636 - VSTM4 chr10 50227820 - Exonic hg19 BRCA TCGA-D8-A1JH-01A 26 6 Out-of-frame Intra-chr p11.22 q11.23 Seq+ 68221 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRP2-KLF7 NRP2 chr2 206631527 - KLF7 chr2 207953305 - Exonic hg19 ESCA TCGA-L5-A8NT-01A 77 273 In-Frame Intra-chr q33.3 q33.3 Transcription factor Seq+ 68222 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRP2-PARD3B NRP2 chr2 206631527 - PARD3B chr2 206480180 + Exonic hg19 BRCA TCGA-BH-A18V-01A 31 31 Out-of-frame Intra-chr q33.3 q33.3 Seq+ 68223 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRP2-PARD3B NRP2 chr2 206548087 - PARD3B chr2 206418048 + Exonic hg19 HNSC TCGA-CV-7090-01A 11 7 Out-of-frame Intra-chr q33.3 q33.3 Seq+ 68224 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRP2-PARD3B NRP2 chr2 206657009 - PARD3B chr2 206418048 + Exonic hg19 SKCM TCGA-EE-A20I-06A 28 34 Out-of-frame Intra-chr q33.3 q33.3 Seq+ 68225 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRP2-PARD3B NRP2 chr2 206562445 - PARD3B chr2 206480180 + Exonic hg19 HNSC TCGA-P3-A6T3-01A 5 2 In-Frame Intra-chr q33.3 q33.3 Seq+ 68226 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRSN2-OSBPL1A NRSN2 chr20 327786 - OSBPL1A chr18 21776164 - Exonic hg19 SKCM TCGA-3N-A9WC-06A 2 1 5'UTR-CDS Inter-chr p13 Tumor suppressor gene q11.2 Seq+ 68227 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRXN2-NSD1 NRXN2 chr11 64387766 - NSD1 chr5 176665238 + Exonic hg19 UCS TCGA-N5-A4RT-01A 5 3 Out-of-frame Inter-chr q13.1 q35.3 Oncogene Seq+ 68228 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRXN3-ADCK1 NRXN3 chr14 78710145 - ADCK1 chr14 78397861 + Exonic hg19 LIHC TCGA-CC-A3M9-01A 6 6 5'UTR-CDS Intra-chr q24.3 q24.3 Atypical:ABC1 Seq+ 68229 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRXN3-IFT74 NRXN3 chr14 80164280 - IFT74 chr9 27029023 + Exonic hg19 LGG TCGA-HT-A614-01A 4 1 Out-of-frame Inter-chr q24.3 p21.2 68230 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NRXN3-TSHR NRXN3 chr14 79454484 - TSHR chr14 81528492 + Exonic hg19 LGG TCGA-S9-A89Z-01A 2 1 Out-of-frame Intra-chr q24.3 q31.1 Oncogene 68231 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSA2-HEXB NSA2 chr5 74066635 - HEXB chr5 74009331 + Exonic hg19 BRCA TCGA-BH-A0AV-01A 38 64 In-Frame Intra-chr q13.3 q13.3 Seq+ 68232 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSA2-PCDHA3 NSA2 chr5 74063188 - PCDHA3 chr5 140358534 + Exonic hg19 SKCM TCGA-ER-A197-06A 45 24 In-Frame Intra-chr q13.3 q31.3 Seq+ 68233 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSD1-ARHGAP26 NSD1 chr5 176639196 - ARHGAP26 chr5 142287269 + Exonic hg19 SARC TCGA-3B-A9HR-01A 39 32 In-Frame Intra-chr q35.3 Oncogene q31.3 Seq+ 68234 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSD1-C11orf58 NSD1 chr5 176666866 - C11orf58 chr11 16766148 + Exonic hg19 LUSC TCGA-85-A50M-01A 23 28 In-Frame Inter-chr q35.3 Oncogene p15.2 Seq+ 68235 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSD1-CDH23 NSD1 chr5 176563031 - CDH23 chr10 73434869 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 35 17 In-Frame Inter-chr q35.3 Oncogene q22.1 Seq+ 68236 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSD1-DPEP2 NSD1 chr5 176619020 - DPEP2 chr16 68023301 - Exonic hg19 CESC TCGA-C5-A7UH-01A 37 19 In-Frame Inter-chr q35.3 Oncogene q22.1 Seq+ 68237 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSD1-EFNA5 NSD1 chr5 176619020 - EFNA5 chr5 106717077 - Exonic hg19 ACC TCGA-OR-A5JS-01A 79 39 In-Frame Intra-chr q35.3 Oncogene q21.3 Tumor suppressor gene Seq+ 68238 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSD1-FAT2 NSD1 chr5 176675325 - FAT2 chr5 150892167 - Exonic hg19 BLCA TCGA-BT-A20T-01A 2 1 In-Frame Intra-chr q35.3 Oncogene q33.1 Seq+ 68239 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSD1-FGF18 NSD1 chr5 176684152 - FGF18 chr5 170876151 + Exonic hg19 SARC TCGA-DX-AB3A-01A 13 4 In-Frame Intra-chr q35.3 Oncogene q35.1 Seq+ 68240 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSD1-FGFR4 NSD1 chr5 176563031 - FGFR4 chr5 176519322 + Exonic hg19 LIHC TCGA-2Y-A9H0-01A 3 7 Out-of-frame Intra-chr q35.3 Oncogene q35.2 TK:FGFR Oncogene Seq+ 68241 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSD1-NUP98 NSD1 chr5 176639196 - NUP98 chr11 3756554 - Exonic hg19 LAML TCGA-AB-2856-03A 25 8 In-Frame Inter-chr q35.3 Oncogene p15.4 Oncogene Tumor suppressor gene KB Pub Seq+ 68242 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSD1-NUP98 NSD1 chr5 176639196 - NUP98 chr11 3756554 - Exonic hg19 LAML TCGA-AB-2930-03A 21 38 In-Frame Inter-chr q35.3 Oncogene p15.4 Oncogene Tumor suppressor gene KB Pub Seq+ 68243 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSD1-RNF130 NSD1 chr5 176563031 - RNF130 chr5 179467647 - Exonic hg19 LGG TCGA-RY-A83Z-01A 3 1 Out-of-frame Intra-chr q35.3 Oncogene q35.3 Seq+ 68244 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSD1-UNC5A NSD1 chr5 176563031 - UNC5A chr5 176289625 + Exonic hg19 LUAD TCGA-49-4505-01A 2 1 Out-of-frame Intra-chr q35.3 Oncogene q35.2 Tumor suppressor gene 68245 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSD1-ZNF346 NSD1 chr5 176678854 - ZNF346 chr5 176468127 + Exonic hg19 OV TCGA-24-1427-01A 8 4 In-Frame Intra-chr q35.3 Oncogene q35.2 Transcription factor Seq+ 68246 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSD1-ZNF346 NSD1 chr5 176563031 - ZNF346 chr5 176468127 + Exonic hg19 BRCA TCGA-A7-A26G-01A 32 26 Out-of-frame Intra-chr q35.3 Oncogene q35.2 Transcription factor Seq+ 68247 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSD1-ZNF346 NSD1 chr5 176619020 - ZNF346 chr5 176468127 + Exonic hg19 CESC TCGA-C5-A3HF-01A 4 1 In-Frame Intra-chr q35.3 Oncogene q35.2 Transcription factor Seq+ 68248 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSD1-ZNF346 NSD1 chr5 176619020 - ZNF346 chr5 176489059 + Exonic hg19 BRCA TCGA-D8-A140-01A 40 33 In-Frame Intra-chr q35.3 Oncogene q35.2 Transcription factor Seq+ 68249 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSD1-ZNF346 NSD1 chr5 176696808 - ZNF346 chr5 176468127 + Exonic hg19 LUSC TCGA-NC-A5HL-01A 23 12 In-Frame Intra-chr q35.3 Oncogene q35.2 Transcription factor Seq+ 68250 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSD1-ZNF346 NSD1 chr5 176563031 - ZNF346 chr5 176489059 + Exonic hg19 ACC TCGA-OR-A5JE-01A 8 2 Out-of-frame Intra-chr q35.3 Oncogene q35.2 Transcription factor Seq+ 68251 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSF-EED NSF chr17 44834830 - EED chr11 85987947 + Exonic hg19 PRAD TCGA-KK-A59X-01A 2 1 Out-of-frame Inter-chr q14.2 Tumor suppressor gene 68252 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSF-NFE2L1 NSF chr17 44782220 - NFE2L1 chr17 46133748 + Exonic hg19 SKCM TCGA-FW-A3I3-06A 5 9 In-Frame Intra-chr q21.32 Transcription factor Seq+ 68253 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSFL1C-HOOK2 NSFL1C chr20 1447365 - HOOK2 chr19 12885711 - Exonic hg19 SARC TCGA-FX-A48G-01A 6 1 In-Frame Inter-chr p13 p13.13 68254 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSMAF-CLVS1 NSMAF chr8 59506791 - CLVS1 chr8 62370866 + Exonic hg19 PRAD TCGA-KK-A8IB-01A 2 2 Out-of-frame Intra-chr q12.1 q12.2 Seq+ 68255 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSMAF-DEPTOR NSMAF chr8 59535779 - DEPTOR chr8 120940640 + Exonic hg19 BRCA TCGA-AR-A0TY-01A 2 4 In-Frame Intra-chr q12.1 q24.12 Seq+ 68256 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSMAF-LETM2 NSMAF chr8 59509946 - LETM2 chr8 38257790 + Exonic hg19 BRCA TCGA-C8-A27A-01A 19 11 Out-of-frame Intra-chr q12.1 p11.23 Seq+ 68257 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSMAF-TOX NSMAF chr8 59572132 - TOX chr8 59764364 - Exonic hg19 COAD TCGA-G4-6626-01A 5 3 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 68258 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSMCE1-IL4R NSMCE1 chr16 27268756 - IL4R chr16 27367129 + Exonic hg19 SKCM TCGA-BF-A1Q0-01A 25 12 In-Frame Intra-chr p12.1 p12.1 Seq+ 68259 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSMCE1-PEX11G NSMCE1 chr16 27280027 - PEX11G chr19 7547097 - Exonic hg19 LUSC TCGA-90-7964-01A 3 2 5'UTR-CDS Inter-chr p12.1 p13.2 Seq+ 68260 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSMCE2-COL22A1 NSMCE2 chr8 126194498 - COL22A1 chr8 139856401 - Exonic hg19 SARC TCGA-JV-A75J-01A 13 9 In-Frame Intra-chr q24.13 q24.3 Seq+ 68261 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSMCE2-DCLRE1C NSMCE2 chr8 126114729 - DCLRE1C chr10 14941311 - Exonic hg19 BRCA TCGA-AR-A1AW-01A 27 10 Out-of-frame Inter-chr q24.13 p13 Seq+ 68262 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSMCE2-EXT1 NSMCE2 chr8 126163519 - EXT1 chr8 118817132 - Exonic hg19 SARC TCGA-JV-A75J-01A 4 4 Out-of-frame Intra-chr q24.13 q24.11 Oncogene Tumor suppressor gene Seq+ 68263 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSMCE2-PACRG NSMCE2 chr8 126114729 - PACRG chr6 163235179 + Exonic hg19 HNSC TCGA-BA-4077-01B 9 6 Out-of-frame Inter-chr q24.13 q26 Tumor suppressor gene Seq+ 68264 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSMCE2-PBX3 NSMCE2 chr8 126194498 - PBX3 chr9 128677965 + Exonic hg19 OV TCGA-24-1567-01A 2 1 In-Frame Inter-chr q24.13 q33.3 Transcription factor Seq+ 68265 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSMCE2-RP11-785H20.1 NSMCE2 chr8 126114729 - RP11-785H20.1 chr8 122901064 + Exonic hg19 PRAD TCGA-V1-A9Z7-01A 2 3 Out-of-frame Intra-chr q24.13 68266 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSMCE2-SNTB1 NSMCE2 chr8 126163519 - SNTB1 chr8 121587465 - Exonic hg19 BRCA TCGA-A8-A08B-01A 7 4 In-Frame Intra-chr q24.13 q24.12 Seq+ 68267 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSMCE2-TAF2 NSMCE2 chr8 126163519 - TAF2 chr8 120774848 - Exonic hg19 SARC TCGA-DX-A48N-01A 9 1 In-Frame Intra-chr q24.13 q24.12 68268 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSMCE2-WDR67 NSMCE2 chr8 126194498 - WDR67 chr8 124153001 + Exonic hg19 PAAD TCGA-FB-AAQ2-01A 9 2 Out-of-frame Intra-chr q24.13 68269 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSRP1-ANKRD13B NSRP1 chr17 28445191 - ANKRD13B chr17 27934760 + Exonic hg19 BRCA TCGA-A2-A25B-01A 5 3 In-Frame Intra-chr q11.2 q11.2 Seq+ 68270 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSRP1-CDK12 NSRP1 chr17 28445191 - CDK12 chr17 37646810 + Exonic hg19 PRAD TCGA-YJ-A8SW-01A 17 14 Out-of-frame Intra-chr q11.2 q12 Oncogene Seq+ 68271 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSRP1-EFCAB5 NSRP1 chr17 28445191 - EFCAB5 chr17 28378136 + Exonic hg19 BLCA TCGA-HQ-A2OE-01A 4 1 In-Frame Intra-chr q11.2 q11.2 68272 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSRP1-METTL23 NSRP1 chr17 28445191 - METTL23 chr17 74725772 + Exonic hg19 LIHC TCGA-DD-A3A9-01A 4 3 CDS-5'UTR Intra-chr q11.2 q25.1 68273 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSRP1-SKAP1 NSRP1 chr17 28443881 - SKAP1 chr17 46474147 - Exonic hg19 BRCA TCGA-AN-A0XW-01A 3 4 Out-of-frame Intra-chr q11.2 q21.32 Seq+ 68274 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSRP1-WDR27 NSRP1 chr17 28445191 - WDR27 chr6 169857729 - Exonic hg19 SARC TCGA-QQ-A5V9-01A 2 1 In-Frame Inter-chr q11.2 q27 68275 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSRP1-ZNF536 NSRP1 chr17 28443881 - ZNF536 chr19 31025754 + Exonic hg19 MESO TCGA-UD-AAC4-01A 3 2 Out-of-frame Inter-chr q11.2 q12 Transcription factor 68276 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSUN4-BMPR1B NSUN4 chr1 46810816 - BMPR1B chr4 96044961 + Exonic hg19 LUAD TCGA-44-7670-01A 3 1 Out-of-frame Inter-chr p33 q22.3 TKL:STKR 68277 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NSUN5-BAZ1B NSUN5 chr7 72721391 - BAZ1B chr7 72865324 - Exonic hg19 UCEC TCGA-EY-A54A-01A 7 2 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 68278 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NT5C2-C10orf120 NT5C2 chr10 104934615 - C10orf120 chr10 124458928 - Exonic hg19 BRCA TCGA-GI-A2C8-01A 10 1 In-Frame Intra-chr q24.33 q26.13 Seq+ 68279 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NT5C2-DLEU1 NT5C2 chr10 104899163 - DLEU1 chr13 50678840 + Exonic hg19 SARC TCGA-FX-A76Y-01A 72 39 CDS-5'UTR Inter-chr q24.33 q14.2 Tumor suppressor gene Seq+ 68280 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NT5C2-LRIT1 NT5C2 chr10 104899163 - LRIT1 chr10 85994134 - Exonic hg19 MESO TCGA-ZN-A9VQ-01A 31 33 In-Frame Intra-chr q24.33 q23.1 Seq+ 68281 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NT5DC1-SEC63 NT5DC1 chr6 116436933 - SEC63 chr6 108204350 - Exonic hg19 HNSC TCGA-MT-A7BN-01A 9 22 In-Frame Intra-chr q22.1 q21 Seq+ 68282 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NT5DC1-SLC35F1 NT5DC1 chr6 116439108 - SLC35F1 chr6 118588158 + Exonic hg19 ACC TCGA-OR-A5KO-01A 5 2 Out-of-frame Intra-chr q22.1 q22.2 Seq+ 68283 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NT5DC3-KNTC1 NT5DC3 chr12 104234727 - KNTC1 chr12 123095369 + Exonic hg19 STAD TCGA-BR-7959-01A 14 121 Out-of-frame Intra-chr q23.3 q24.31 Seq+ 68284 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NT5DC3-PTPRR NT5DC3 chr12 104208715 - PTPRR chr12 71158558 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 4 3 In-Frame Intra-chr q23.3 q15 Seq+ 68285 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NT5E-ASCC3 NT5E chr6 86160196 - ASCC3 chr6 101054964 - Exonic hg19 LIHC TCGA-CC-A8HV-01A 2 2 In-Frame Intra-chr q14.3 q16.3 68286 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NTHL1-KLRC3 NTHL1 chr16 2097710 - KLRC3 chr12 10565215 - Exonic hg19 LGG TCGA-TM-A84I-01A 20 6 Out-of-frame Inter-chr p13.3 p13.2 Seq+ 68287 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NTM-CARD18 NTM chr11 131240783 - CARD18 chr11 105009805 - Exonic hg19 PRAD TCGA-EJ-7781-01A 4 1 In-Frame Intra-chr q25 q22.3 68288 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NTM-CCDC86 NTM chr11 131781542 - CCDC86 chr11 60615397 + Exonic hg19 LGG TCGA-HT-7686-01A 2 3 In-Frame Intra-chr q25 q12.2 68289 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NTM-CTNNA2 NTM chr11 132082041 - CTNNA2 chr2 80085139 + Exonic hg19 SARC TCGA-SI-A71O-01A 19 7 In-Frame Inter-chr q25 p12 Tumor suppressor gene Seq+ 68290 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NTM-SORL1 NTM chr11 131781542 - SORL1 chr11 121475822 + Exonic hg19 SARC TCGA-K1-A6RV-01A 15 9 Out-of-frame Intra-chr q25 q24.1 Seq+ 68291 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NTN1-RANGAP1 NTN1 chr17 8926708 - RANGAP1 chr22 41664160 - Exonic hg19 UCEC TCGA-A5-A7WK-01A 20 12 Out-of-frame Inter-chr p13.1 q13.2 Seq+ 68292 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NTN1-STX8 NTN1 chr17 9086286 - STX8 chr17 9153962 - Exonic hg19 LUSC TCGA-21-5784-01A 2 3 In-Frame Intra-chr p13.1 p13.1 Seq+ 68293 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NTN4-CCDC38 NTN4 chr12 96180717 - CCDC38 chr12 96292243 - Exonic hg19 LUAD TCGA-05-4427-01A 2 6 Out-of-frame Intra-chr q22 q23.1 68294 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NTN4-KIFAP3 NTN4 chr12 96180717 - KIFAP3 chr1 169930376 - Exonic hg19 SARC TCGA-DX-A1L3-01A 33 8 In-Frame Inter-chr q22 q24.2 68295 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NTN4-LETMD1 NTN4 chr12 96180717 - LETMD1 chr12 51450133 + Exonic hg19 SARC TCGA-DX-AB2G-01A 5 6 In-Frame Intra-chr q22 q13.12 Seq+ 68296 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NTN4-NUP107 NTN4 chr12 96131644 - NUP107 chr12 69135593 + Exonic hg19 SARC TCGA-DX-A3M1-01A 75 77 In-Frame Intra-chr q22 q15 Seq+ 68297 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NTN4-PAH NTN4 chr12 96076483 - PAH chr12 103288696 - Exonic hg19 ACC TCGA-OR-A5JA-01A 7 7 Out-of-frame Intra-chr q22 q23.2 Seq+ 68298 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NTN4-TRHDE NTN4 chr12 96104219 - TRHDE chr12 72680461 + Exonic hg19 SARC TCGA-DX-A3M1-01A 11 7 Out-of-frame Intra-chr q22 q21.1 Seq+ 68299 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NTNG1-CALN1 NTNG1 chr1 107691461 - CALN1 chr7 71252887 - Exonic hg19 SKCM TCGA-D9-A4Z5-01A 2 2 Out-of-frame Inter-chr p13.3 q11.22 Seq+ 68300 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NTRK1-DYNC2H1 NTRK1 chr1 156849949 - DYNC2H1 chr11 103306671 + Exonic hg19 SARC TCGA-DX-A3LY-01B 6 5 In-Frame Inter-chr q23.1 Oncogene q22.3 Seq+ 68301 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NTRK2-LAP3 NTRK2 chr9 87430621 - LAP3 chr4 17585225 + Exonic hg19 LGG TCGA-DB-5278-01A 2 1 Out-of-frame Inter-chr q21.33 Oncogene p15.32 68302 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NTRK2-RASEF NTRK2 chr9 87570432 - RASEF chr9 85597697 - Exonic hg19 BRCA TCGA-D8-A1XD-01A 2 1 Out-of-frame Intra-chr q21.33 Oncogene q21.32 Seq+ 68303 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NTRK3-ETV6 NTRK3 chr15 88669502 - ETV6 chr12 12022358 + Exonic hg19 THCA TCGA-E8-A438-01A 8 5 In-Frame Inter-chr q25.3 Oncogene Tumor suppressor gene p13.2 Tumor suppressor gene Transcription factor KB Seq+ 68304 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NTRK3-RBPMS NTRK3 chr15 88669502 - RBPMS chr8 30402011 + Exonic hg19 THCA TCGA-ET-A39L-01A 133 70 In-Frame Inter-chr q25.3 Oncogene Tumor suppressor gene p12 Seq+ 68305 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUAK1-C12orf65 NUAK1 chr12 106477642 - C12orf65 chr12 123738194 + Exonic hg19 SARC TCGA-PC-A5DN-01A 27 17 CDS-5'UTR Intra-chr q23.3 Tumor suppressor gene q24.31 Seq+ 68306 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUAK1-UHRF1BP1L NUAK1 chr12 106500183 - UHRF1BP1L chr12 100433567 - Exonic hg19 SARC TCGA-DX-A48N-01A 7 4 In-Frame Intra-chr q23.3 Tumor suppressor gene q23.1 Seq+ 68307 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUAK2-CYB5R1 NUAK2 chr1 205290526 - CYB5R1 chr1 202936026 - Exonic hg19 LGG TCGA-HT-8011-01A 14 7 In-Frame Intra-chr q32.1 q32.1 Seq+ 68308 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUAK2-LEMD1 NUAK2 chr1 205280833 - LEMD1 chr1 205389702 - Exonic hg19 HNSC TCGA-BA-6871-01A 115 73 CDS-5'UTR Intra-chr q32.1 q32.1 Seq+ 68309 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUB1-ABCB8 NUB1 chr7 151042552 - ABCB8 chr7 150742296 + Exonic hg19 LUSC TCGA-66-2800-01A 81 15 In-Frame Intra-chr q36.1 q36.1 Seq+ 68310 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUBP1-UMODL1 NUBP1 chr16 10851884 - UMODL1 chr21 43508404 + Exonic hg19 BRCA TCGA-A1-A0SP-01A 9 5 In-Frame Inter-chr p13.13 q22.3 Seq+ 68311 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUBP2-RHBDL1 NUBP2 chr16 1833037 - RHBDL1 chr16 726971 + Exonic hg19 SARC TCGA-JV-A75J-01A 4 8 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 68312 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUBPL-ANKRD46 NUBPL chr14 32257079 - ANKRD46 chr8 101522867 - Exonic hg19 BRCA TCGA-AR-A0TT-01A 3 1 Out-of-frame Inter-chr q12 q22.3 68313 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUBPL-DOCK2 NUBPL chr14 32142780 - DOCK2 chr5 169435501 + Exonic hg19 OV TCGA-24-1557-01A 8 2 In-Frame Inter-chr q12 q35.1 Seq+ 68314 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUBPL-SCFD1 NUBPL chr14 32034254 - SCFD1 chr14 31163979 + Exonic hg19 BRCA TCGA-EW-A6SB-01A 5 3 In-Frame Intra-chr q12 q12 Seq+ 68315 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUCB1-FAM83E NUCB1 chr19 49416821 - FAM83E chr19 49104626 - Exonic hg19 OV TCGA-20-0987-01A 14 12 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 68316 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUCKS1-PM20D1 NUCKS1 chr1 205719085 - PM20D1 chr1 205811017 - Exonic hg19 GBM TCGA-19-2619-01A 4 79 In-Frame Intra-chr q32.1 q32.1 Seq+ 68317 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUCKS1-RAB7L1 NUCKS1 chr1 205719085 - RAB7L1 chr1 205740781 - Exonic hg19 SKCM TCGA-D3-A1QB-06A 33 32 Out-of-frame Intra-chr q32.1 Seq+ 68318 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUCKS1-SDCCAG8 NUCKS1 chr1 205696828 - SDCCAG8 chr1 243579004 + Exonic hg19 UCS TCGA-N9-A4PZ-01A 12 7 In-Frame Intra-chr q32.1 Seq+ 68319 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUDC-IGFN1 NUDC chr1 27250657 - IGFN1 chr1 201162375 + Exonic hg19 UCEC TCGA-AJ-A6NU-01A 5 4 CDS-5'UTR Intra-chr p36.11 q32.1 Seq+ 68320 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUDCD1-KIAA0564 NUDCD1 chr8 110283234 - KIAA0564 chr13 42189220 - Exonic hg19 OV TCGA-24-1557-01A 5 1 In-Frame Inter-chr q23.1 68321 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUDCD1-TMEM184C NUDCD1 chr8 110334538 - TMEM184C chr4 148544985 + Exonic hg19 BRCA TCGA-E2-A1LH-01A 2 1 In-Frame Inter-chr q23.1 q31.23 Seq+ 68322 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUDT16L1-FAHD1 NUDT16L1 chr16 4744239 - FAHD1 chr16 1888017 + Exonic hg19 GBM TCGA-06-5856-01A 3 9 In-Frame Intra-chr p13.3 p13.3 Seq+ 68323 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUDT17-POLR3C NUDT17 chr1 145589236 - POLR3C chr1 145595220 - Exonic hg19 STAD TCGA-D7-8575-01A 3 5 In-Frame Intra-chr q21.1 q21.1 68324 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUDT19-SLC7A9 NUDT19 chr19 33183580 - SLC7A9 chr19 33324229 - Exonic hg19 OV TCGA-24-1552-01A 13 14 In-Frame Intra-chr q13.11 q13.11 Seq+ 68325 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUDT2-GLIPR2 NUDT2 chr9 34339164 - GLIPR2 chr9 36162359 + Exonic hg19 GBM TCGA-27-2523-01A 9 34 In-Frame Intra-chr p13.3 p13.3 Seq+ 68326 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUDT2-UBAP1 NUDT2 chr9 34339164 - UBAP1 chr9 34249777 + Exonic hg19 BLCA TCGA-2F-A9KO-01A 4 3 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 68327 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUDT21-BBS2 NUDT21 chr16 56484999 - BBS2 chr16 56519650 - Exonic hg19 UCEC TCGA-DF-A2KN-01A 3 2 In-Frame Intra-chr q13 q13 Seq+ 68328 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUDT21-BBS2 NUDT21 chr16 56473569 - BBS2 chr16 56518779 - Exonic hg19 SARC TCGA-HS-A5N7-01A 300 236 Out-of-frame Intra-chr q13 q13 Seq+ 68329 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUDT3-CDH12 NUDT3 chr6 34360041 - CDH12 chr5 21817241 - Exonic hg19 HNSC TCGA-CR-7379-01A 8 2 Out-of-frame Inter-chr p21.31 p14.3 Seq+ 68330 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUDT3-DNAH8 NUDT3 chr6 34360041 - DNAH8 chr6 38795960 + Exonic hg19 LUSC TCGA-77-7142-01A 10 3 In-Frame Intra-chr p21.31 p21.2 Seq+ 68331 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUDT3-TCP11 NUDT3 chr6 34360041 - TCP11 chr6 35096959 - Exonic hg19 UCS TCGA-N5-A4RU-01A 29 17 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 68332 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUDT4-ADD1 NUDT4 chr12 93772197 - ADD1 chr4 2877623 + Exonic hg19 LUAD TCGA-69-7760-01A 4 11 CDS-5'UTR Inter-chr q22 p16.3 68333 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUDT4-ATAD5 NUDT4 chr12 93772197 - ATAD5 chr17 29187451 + Exonic hg19 PRAD TCGA-V1-A9Z8-01A 3 7 Out-of-frame Inter-chr q22 q11.2 Seq+ 68334 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUF2-PHEX NUF2 chr1 163310216 - PHEX chrX 22151640 + Exonic hg19 SARC TCGA-DX-A1KY-01A 62 27 In-Frame Inter-chr q23.3 p22.11 Seq+ 68335 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUF2-TIMM17A NUF2 chr1 163317728 - TIMM17A chr1 201926409 + Exonic hg19 LUAD TCGA-78-7159-01A 4 3 In-Frame Intra-chr q23.3 q32.1 Seq+ 68336 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUFIP1-FAAH NUFIP1 chr13 45533516 - FAAH chr1 46879119 + Exonic hg19 LUSC TCGA-85-A4JC-01A 13 17 Out-of-frame Inter-chr q14.12 p33 Seq+ 68337 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUFIP2-CPD NUFIP2 chr17 27620801 - CPD chr17 28712007 + Exonic hg19 PRAD TCGA-HC-7742-01A 7 1 Out-of-frame Intra-chr q11.2 q11.2 Tumor suppressor gene 68338 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUFIP2-ZNF643 NUFIP2 chr17 27620801 - ZNF643 chr1 40916328 + Exonic hg19 BLCA TCGA-DK-A2I2-01A 6 2 CDS-5'UTR Inter-chr q11.2 68339 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMA1-AATF NUMA1 chr11 71780888 - AATF chr17 35343916 + Exonic hg19 BRCA TCGA-A8-A08S-01A 205 165 5'UTR-CDS Inter-chr q13.4 Oncogene Seq+ 68340 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMA1-ABHD12 NUMA1 chr11 71780888 - ABHD12 chr20 25304066 - Exonic hg19 LUSC TCGA-18-3410-01A 55 17 5'UTR-CDS Inter-chr q13.4 Oncogene p11.21 Seq+ 68341 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMA1-ADARB2 NUMA1 chr11 71734111 - ADARB2 chr10 1263059 - Exonic hg19 BRCA TCGA-A8-A06U-01A 11 6 Out-of-frame Inter-chr q13.4 Oncogene p15.3 Seq+ 68342 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMA1-C2CD3 NUMA1 chr11 71780888 - C2CD3 chr11 73724570 - Exonic hg19 SKCM TCGA-DA-A95V-06A 31 21 5'UTR-3'UTR Intra-chr q13.4 Oncogene q13.4 Seq+ 68343 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMA1-CADM2 NUMA1 chr11 71791504 - CADM2 chr3 86114755 + Exonic hg19 LIHC TCGA-2Y-A9H2-01A 20 13 5'UTR-CDS Inter-chr q13.4 Oncogene p12.1 Tumor suppressor gene Seq+ 68344 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMA1-CCT5 NUMA1 chr11 71713911 - CCT5 chr5 10250033 + Exonic hg19 UCS TCGA-N6-A4V9-01A 2 5 3'UTR-5'UTR Inter-chr q13.4 Oncogene p15.2 68345 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMA1-CLPB NUMA1 chr11 71746948 - CLPB chr11 72119248 - Exonic hg19 STAD TCGA-R5-A7ZE-01B 2 5 In-Frame Intra-chr q13.4 Oncogene q13.4 Seq+ 68346 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMA1-CRYM NUMA1 chr11 71713910 - CRYM chr16 21290281 - Exonic hg19 PRAD TCGA-HC-7821-01A 2 1 3'UTR-5'UTR Inter-chr q13.4 Oncogene 68347 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMA1-EIF2AK2 NUMA1 chr11 71713911 - EIF2AK2 chr2 37342384 - Exonic hg19 LGG TCGA-DU-6393-01A 2 17 3'UTR-CDS Inter-chr q13.4 Oncogene p22.2 68348 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMA1-FAM83B NUMA1 chr11 71780888 - FAM83B chr6 54734985 + Exonic hg19 BRCA TCGA-A2-A0T4-01A 4 1 5'UTR-5'UTR Inter-chr q13.4 Oncogene p12.1 68349 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMA1-FOLR1 NUMA1 chr11 71780888 - FOLR1 chr11 71903210 + Exonic hg19 LGG TCGA-E1-5302-01A 18 10 5'UTR-5'UTR Intra-chr q13.4 Oncogene q13.4 Seq+ 68350 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMA1-FOXP1 NUMA1 chr11 71713911 - FOXP1 chr3 71007472 - Exonic hg19 PRAD TCGA-CH-5764-01A 2 5 3'UTR-3'UTR Inter-chr q13.4 Oncogene p13 Oncogene Tumor suppressor gene Transcription factor 68351 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMA1-IQSEC3 NUMA1 chr11 71780888 - IQSEC3 chr12 208312 + Exonic hg19 ESCA TCGA-IG-A8O2-01A 3 34 5'UTR-5'UTR Inter-chr q13.4 Oncogene Seq+ 68352 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMA1-PITPNM1 NUMA1 chr11 71718235 - PITPNM1 chr11 67265793 - Exonic hg19 BRCA TCGA-E2-A107-01A 64 39 Out-of-frame Intra-chr q13.4 Oncogene q13.2 Seq+ 68353 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMA1-PPP2R5B NUMA1 chr11 71780888 - PPP2R5B chr11 64694184 + Exonic hg19 BRCA TCGA-E2-A1IU-01A 97 30 5'UTR-CDS Intra-chr q13.4 Oncogene q13.1 Seq+ 68354 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMA1-PTH NUMA1 chr11 71791504 - PTH chr11 13514407 - Exonic hg19 BRCA TCGA-A8-A086-01A 29 9 5'UTR-5'UTR Intra-chr q13.4 Oncogene p15.3 Seq+ 68355 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMA1-SFN NUMA1 chr11 71732272 - SFN chr1 27189704 + Exonic hg19 HNSC TCGA-CV-5979-01A 2 2 Out-of-frame Inter-chr q13.4 Oncogene p36.11 Tumor suppressor gene 68356 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMA1-SHANK2 NUMA1 chr11 71780888 - SHANK2 chr11 70742672 - Exonic hg19 BRCA TCGA-A7-A0DC-01B 14 9 5'UTR-5'UTR Intra-chr q13.4 Oncogene q13.4 Seq+ 68357 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMA1-SHANK2 NUMA1 chr11 71780888 - SHANK2 chr11 70349036 - Exonic hg19 BRCA TCGA-PL-A8LX-01A 11 4 5'UTR-CDS Intra-chr q13.4 Oncogene q13.4 Seq+ 68358 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMA1-TRPT1 NUMA1 chr11 71715686 - TRPT1 chr11 63993341 - Exonic hg19 LUAD TCGA-53-A4EZ-01A 51 17 CDS-5'UTR Intra-chr q13.4 Oncogene q13.1 Seq+ 68359 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMA1-UBA2 NUMA1 chr11 71713911 - UBA2 chr19 34919781 + Exonic hg19 LGG TCGA-HT-7687-01A 2 1 3'UTR-CDS Inter-chr q13.4 Oncogene q13.11 68360 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMA1-YAP1 NUMA1 chr11 71746948 - YAP1 chr11 102094353 + Exonic hg19 SKCM TCGA-GN-A4U7-06A 14 8 In-Frame Intra-chr q13.4 Oncogene q22.1 Tumor suppressor gene Seq+ 68361 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMB-DNM2 NUMB chr14 73822334 - DNM2 chr19 10893636 + Exonic hg19 UCS TCGA-N5-A4RD-01A 4 4 Out-of-frame Inter-chr q24.3 Tumor suppressor gene p13.2 Seq+ 68362 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMB-GPR68 NUMB chr14 73822334 - GPR68 chr14 91701523 - Exonic hg19 LUSC TCGA-39-5031-01A 4 1 CDS-5'UTR Intra-chr q24.3 Tumor suppressor gene q32.11 68363 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMB-HEATR4 NUMB chr14 73876645 - HEATR4 chr14 73945547 - Exonic hg19 UCEC TCGA-AX-A2H4-01A 10 4 5'UTR-CDS Intra-chr q24.3 Tumor suppressor gene q24.3 Seq+ 68364 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMB-HEATR4 NUMB chr14 73876645 - HEATR4 chr14 73996948 - Exonic hg19 STAD TCGA-BR-8485-01A 2 6 5'UTR-5'UTR Intra-chr q24.3 Tumor suppressor gene q24.3 Seq+ 68365 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMB-TSHR NUMB chr14 73822334 - TSHR chr14 81528492 + Exonic hg19 SKCM TCGA-WE-A8ZX-06A 3 3 Out-of-frame Intra-chr q24.3 Tumor suppressor gene q31.1 Oncogene Seq+ 68366 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUMB-TTLL5 NUMB chr14 73759442 - TTLL5 chr14 76286350 + Exonic hg19 BLCA TCGA-YF-AA3L-01A 4 4 In-Frame Intra-chr q24.3 Tumor suppressor gene q24.3 Seq+ 68367 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP107-CPM NUP107 chr12 69115932 - CPM chr12 69279669 - Exonic hg19 BLCA TCGA-DK-AA6P-01A 2 2 Out-of-frame Intra-chr q15 q15 68368 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP107-PAAF1 NUP107 chr12 69115932 - PAAF1 chr11 73620444 + Exonic hg19 SARC TCGA-DX-A3U6-01A 17 11 Out-of-frame Inter-chr q15 q13.4 Seq+ 68369 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP107-SHD NUP107 chr12 69109520 - SHD chr19 4290444 + Exonic hg19 LUAD TCGA-55-8506-01A 22 11 Out-of-frame Inter-chr q15 p13.3 Seq+ 68370 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP133-CDH6 NUP133 chr1 229625702 - CDH6 chr5 31299571 + Exonic hg19 BLCA TCGA-G2-A3VY-01A 13 2 Out-of-frame Inter-chr q42.13 p13.3 Seq+ 68371 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP153-C6orf10 NUP153 chr6 17706508 - C6orf10 chr6 32337760 - Exonic hg19 PAAD TCGA-IB-AAUN-01A 6 2 In-Frame Intra-chr p22.3 Seq+ 68372 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP153-DTNBP1 NUP153 chr6 17646298 - DTNBP1 chr6 15524900 - Exonic hg19 BLCA TCGA-PQ-A6FI-01A 459 195 In-Frame Intra-chr p22.3 p22.3 Seq+ 68373 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP153-GCNT2 NUP153 chr6 17688627 - GCNT2 chr6 10493053 + Exonic hg19 BRCA TCGA-B6-A0IA-01A 25 19 CDS-5'UTR Intra-chr p22.3 p24.3 Seq+ 68374 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP153-MAK NUP153 chr6 17675136 - MAK chr6 10819173 - Exonic hg19 LGG TCGA-DH-A66G-01A 2 1 Out-of-frame Intra-chr p22.3 p24.2 CMGC:RCK 68375 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP153-MESP1 NUP153 chr6 17706508 - MESP1 chr15 90293458 - Exonic hg19 SKCM TCGA-YD-A89C-06A 90 41 In-Frame Inter-chr p22.3 q26.1 Transcription factor Seq+ 68376 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP153-NEDD9 NUP153 chr6 17688627 - NEDD9 chr6 11306388 - Exonic hg19 BRCA TCGA-LL-A740-01A 5 7 CDS-5'UTR Intra-chr p22.3 p24.2 Seq+ 68377 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP153-RNF2 NUP153 chr6 17706508 - RNF2 chr1 185056684 + Exonic hg19 BRCA TCGA-AQ-A04J-01A 10 15 CDS-5'UTR Inter-chr p22.3 q25.3 Oncogene Seq+ 68378 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP153-ZNF280C NUP153 chr6 17637384 - ZNF280C chrX 129394439 - Exonic hg19 BRCA TCGA-C8-A12P-01A 3 1 CDS-5'UTR Inter-chr p22.3 q26.1 Transcription factor 68379 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP153-ZNF280D NUP153 chr6 17706508 - ZNF280D chr15 56985413 - Exonic hg19 STAD TCGA-D7-8579-01A 3 6 In-Frame Inter-chr p22.3 q21.3 Transcription factor Seq+ 68380 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP155-RP11-536G4.1 NUP155 chr5 37326003 - RP11-536G4.1 chr12 96216867 + Exonic hg19 SARC TCGA-DX-A1L3-01A 61 21 Out-of-frame Inter-chr p13.2 68381 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP155-TRIO NUP155 chr5 37314300 - TRIO chr5 14531853 + Exonic hg19 BLCA TCGA-E5-A2PC-01A 71 44 CDS-3'UTR Intra-chr p13.2 p15.2 Seq+ 68382 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP155-ZFYVE26 NUP155 chr5 37370923 - ZFYVE26 chr14 68244965 - Exonic hg19 BRCA TCGA-E2-A15K-01A 11 4 Out-of-frame Inter-chr p13.2 q24.1 Seq+ 68383 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP160-RBM6 NUP160 chr11 47869400 - RBM6 chr3 50114441 + Exonic hg19 UCS TCGA-N5-A4RA-01A 79 51 Out-of-frame Inter-chr p11.2 p21.31 Tumor suppressor gene Seq+ 68384 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP188-ASTN2 NUP188 chr9 131735528 - ASTN2 chr9 119382722 - Exonic hg19 BRCA TCGA-E9-A1N9-01A 11 13 In-Frame Intra-chr q34.11 q33.1 Seq+ 68385 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP188-PHYHD1 NUP188 chr9 131711522 - PHYHD1 chr9 131698727 + Exonic hg19 THCA TCGA-FE-A3PA-01A 48 5 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 68386 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP188-PHYHD1 NUP188 chr9 131711522 - PHYHD1 chr9 131703724 + Exonic hg19 ESCA TCGA-L5-A4OQ-01A 6 34 In-Frame Intra-chr q34.11 q34.11 Seq+ 68387 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP188-SPTAN1 NUP188 chr9 131752505 - SPTAN1 chr9 131375660 + Exonic hg19 UCEC TCGA-A5-A7WK-01A 44 19 In-Frame Intra-chr q34.11 q34.11 Seq+ 68388 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP188-TBC1D13 NUP188 chr9 131721413 - TBC1D13 chr9 131565529 + Exonic hg19 UCS TCGA-N8-A56S-01A 27 13 In-Frame Intra-chr q34.11 q34.11 Seq+ 68389 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP188-TMEM8C NUP188 chr9 131768647 - TMEM8C chr9 136379907 - Exonic hg19 BLCA TCGA-2F-A9KP-01A 74 20 In-Frame Intra-chr q34.11 q34.2 Seq+ 68390 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP205-CCDC136 NUP205 chr7 135310103 - CCDC136 chr7 128441240 + Exonic hg19 LUAD TCGA-95-7944-01A 7 3 Out-of-frame Intra-chr q33 q32.1 Tumor suppressor gene 68391 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP205-DVL2 NUP205 chr7 135330979 - DVL2 chr17 7133474 - Exonic hg19 PRAD TCGA-V1-A9ZR-01A 4 5 Out-of-frame Inter-chr q33 p13.1 Seq+ 68392 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP205-GIMAP8 NUP205 chr7 135292119 - GIMAP8 chr7 150171100 + Exonic hg19 SARC TCGA-DX-A8BR-01A 18 5 Out-of-frame Intra-chr q33 q36.1 Seq+ 68393 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP205-SERPINA12 NUP205 chr7 135282166 - SERPINA12 chr14 94964767 - Exonic hg19 SARC TCGA-IW-A3M6-01A 50 5 Out-of-frame Inter-chr q33 q32.13 Seq+ 68394 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP205-WDR91 NUP205 chr7 135289208 - WDR91 chr7 134882903 - Exonic hg19 KIRC TCGA-B0-4690-01A 10 8 In-Frame Intra-chr q33 q33 Seq+ 68395 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP210-FBLN2 NUP210 chr3 13393379 - FBLN2 chr3 13679062 + Exonic hg19 LUAD TCGA-38-4630-01A 13 7 Out-of-frame Intra-chr p25.1 p25.1 Seq+ 68396 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP210-MAST1 NUP210 chr3 13418956 - MAST1 chr19 12962748 + Exonic hg19 UCS TCGA-N5-A4RA-01A 4 4 In-Frame Inter-chr p25.1 p13.13 AGC:MAST Seq+ 68397 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP210L-TPM3 NUP210L chr1 153984720 - TPM3 chr1 154131524 - Exonic hg19 UCS TCGA-N5-A4RA-01A 23 16 In-Frame Intra-chr q21.3 q21.3 Seq+ 68398 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP214-ABL1 NUP214 chr9 134027281 - ABL1 chr9 133747516 + Exonic hg19 ESCA TCGA-L5-A4OQ-01A 2 14 In-Frame Intra-chr q34.13 Oncogene q34.12 TK:Abl Oncogene KB Pub Seq+ 68399 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP214-AIF1L NUP214 chr9 134006223 - AIF1L chr9 133986984 + Exonic hg19 BRCA TCGA-E9-A22G-01A 203 142 In-Frame Intra-chr q34.13 Oncogene q34.12 Seq+ 68400 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP35-NCKAP1 NUP35 chr2 183989225 - NCKAP1 chr2 183853914 - Exonic hg19 LUSC TCGA-43-8115-01A 2 4 In-Frame Intra-chr q32.1 q32.1 Seq+ 68401 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP37-ACSS3 NUP37 chr12 102492884 - ACSS3 chr12 81503339 + Exonic hg19 SKCM TCGA-D3-A2J6-06A 14 6 In-Frame Intra-chr q23.2 q21.31 Seq+ 68402 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP43-SHPRH NUP43 chr6 150059779 - SHPRH chr6 146216113 - Exonic hg19 SARC TCGA-DX-A1L0-01A 2 1 Out-of-frame Intra-chr q25.1 q24.3 Tumor suppressor gene Seq+ 68403 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP50-RBFOX2 NUP50 chr22 45560177 - RBFOX2 chr22 36206051 - Exonic hg19 BRCA TCGA-AR-A0TX-01A 7 3 5'UTR-CDS Intra-chr q13.31 68404 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP62-VSTM2B NUP62 chr19 50432607 - VSTM2B chr19 30054753 + Exonic hg19 BLCA TCGA-4Z-AA7M-01A 234 5 5'UTR-CDS Intra-chr q13.33 q12 Seq+ 68405 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP85-IL34 NUP85 chr17 73222252 - IL34 chr16 70680451 + Exonic hg19 PRAD TCGA-V1-A9ZR-01A 2 1 CDS-5'UTR Inter-chr q25.1 q22.1 Seq+ 68406 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP85-KCTD2 NUP85 chr17 73209214 - KCTD2 chr17 73045315 + Exonic hg19 BLCA TCGA-DK-A3X2-01A 8 5 In-Frame Intra-chr q25.1 q25.1 Seq+ 68407 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP85-NR5A2 NUP85 chr17 73201889 - NR5A2 chr1 200080330 + Exonic hg19 LUSC TCGA-NK-A5D1-01A 6 1 In-Frame Inter-chr q25.1 q32.1 Transcription factor Seq+ 68408 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP85-ZDHHC18 NUP85 chr17 73229253 - ZDHHC18 chr1 27180217 + Exonic hg19 BLCA TCGA-CF-A1HR-01A 5 3 Out-of-frame Inter-chr q25.1 p36.11 Seq+ 68409 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP88-NLRP1 NUP88 chr17 5319833 - NLRP1 chr17 5440260 - Exonic hg19 BLCA TCGA-KQ-A41N-01A 3 1 In-Frame Intra-chr p13.2 p13.2 Oncogene 68410 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP93-GNAO1 NUP93 chr16 56792567 - GNAO1 chr16 56309843 + Exonic hg19 LGG TCGA-HT-8104-01A 10 10 Out-of-frame Intra-chr q13 q13 Seq+ 68411 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP93-THADA NUP93 chr16 56792567 - THADA chr2 43460021 - Exonic hg19 UCS TCGA-NA-A4QV-01A 48 42 Out-of-frame Inter-chr q13 p21 Seq+ 68412 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP98-DNHD1 NUP98 chr11 3774546 - DNHD1 chr11 6584212 + Exonic hg19 BLCA TCGA-FD-A43N-01A 3 7 Out-of-frame Intra-chr p15.4 Oncogene Tumor suppressor gene p15.4 Seq+ 68413 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP98-MLXIP NUP98 chr11 3789811 - MLXIP chr12 122611803 + Exonic hg19 UCEC TCGA-D1-A3DG-01A 3 2 Out-of-frame Inter-chr p15.4 Oncogene Tumor suppressor gene Transcription factor Seq+ 68414 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP98-NSD1 NUP98 chr11 3774546 - NSD1 chr5 176662822 + Exonic hg19 LAML TCGA-AB-2918-03A 8 3 In-Frame Inter-chr p15.4 Oncogene Tumor suppressor gene q35.3 Oncogene KB Pub Seq+ 68415 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP98-NSD1 NUP98 chr11 3765739 - NSD1 chr5 176662822 + Exonic hg19 LAML TCGA-AB-2930-03A 4 5 In-Frame Inter-chr p15.4 Oncogene Tumor suppressor gene q35.3 Oncogene KB Pub Seq+ 68416 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP98-RHOG NUP98 chr11 3797112 - RHOG chr11 3849436 - Exonic hg19 CESC TCGA-DS-A1O9-01A 16 7 CDS-5'UTR Intra-chr p15.4 Oncogene Tumor suppressor gene p15.4 Seq+ 68417 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP98-RHOG NUP98 chr11 3700784 - RHOG chr11 3849436 - Exonic hg19 BRCA TCGA-GM-A2DB-01A 16 13 CDS-5'UTR Intra-chr p15.4 Oncogene Tumor suppressor gene p15.4 Seq+ 68418 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUP98-TMEM117 NUP98 chr11 3774546 - TMEM117 chr12 44770378 + Exonic hg19 BRCA TCGA-A8-A06U-01A 6 2 Out-of-frame Inter-chr p15.4 Oncogene Tumor suppressor gene q12 Seq+ 68419 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUPL1-CCDC169 NUPL1 chr13 25911172 - CCDC169 chr13 36857839 - Exonic hg19 LUAD TCGA-97-A4M6-01A 2 1 In-Frame Intra-chr q13.3 68420 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUPL1-KL NUPL1 chr13 25876018 - KL chr13 33627904 + Exonic hg19 SKCM TCGA-EE-A29C-06A 10 3 Out-of-frame Intra-chr q13.1 Tumor suppressor gene Seq+ 68421 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUPL1-SPATA13 NUPL1 chr13 25889605 - SPATA13 chr13 24796957 + Exonic hg19 SARC TCGA-WK-A8XX-01A 4 2 CDS-5'UTR Intra-chr q12.12 68422 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUPL2-DFNA5 NUPL2 chr7 23221825 - DFNA5 chr7 24758837 - Exonic hg19 STAD TCGA-BR-8077-01A 3 13 Out-of-frame Intra-chr p15.3 p15.3 Tumor suppressor gene Seq+ 68423 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NUTF2-TSNAXIP1 NUTF2 chr16 67880888 - TSNAXIP1 chr16 67861152 + Exonic hg19 ACC TCGA-OR-A5K2-01A 17 70 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 68424 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NVL-C2orf72 NVL chr1 224517773 - C2orf72 chr2 231906011 + Exonic hg19 PCPG TCGA-WB-A81J-01A 5 2 Out-of-frame Inter-chr q42.11 q37.1 Seq+ 68425 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NVL-LARS2 NVL chr1 224492736 - LARS2 chr3 45583321 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 6 1 In-Frame Inter-chr q42.11 p21.31 68426 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NVL-NEK2 NVL chr1 224437914 - NEK2 chr1 211847855 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 32 42 In-Frame Intra-chr q42.11 q32.3 Other:NEK Seq+ 68427 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NVL-SUSD4 NVL chr1 224517773 - SUSD4 chr1 223442017 - Exonic hg19 UCEC TCGA-D1-A3JP-01A 21 16 Out-of-frame Intra-chr q42.11 q41 Seq+ 68428 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NVL-WDR26 NVL chr1 224499502 - WDR26 chr1 224577562 - Exonic hg19 UCS TCGA-N6-A4VG-01A 12 11 Out-of-frame Intra-chr q42.11 q42.12 Seq+ 68429 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NXF1-STX5 NXF1 chr11 62566011 - STX5 chr11 62575100 - Exonic hg19 LIHC TCGA-DD-A3A1-01A 79 53 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 68430 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NXF1-STX5 NXF1 chr11 62563932 - STX5 chr11 62575100 - Exonic hg19 UCS TCGA-NA-A4R1-01A 86 62 In-Frame Intra-chr q12.3 q12.3 Seq+ 68431 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NXF1-WDR74 NXF1 chr11 62572801 - WDR74 chr11 62607178 - Exonic hg19 LUSC TCGA-18-3421-01A 20 9 CDS-5'UTR Intra-chr q12.3 q12.3 Seq+ 68432 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NXN-ABR NXN chr17 882559 - ABR chr17 962107 - Exonic hg19 LUAD TCGA-55-8506-01A 18 11 In-Frame Intra-chr p13.3 p13.3 Seq+ 68433 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NXN-ABR NXN chr17 882559 - ABR chr17 916404 - Exonic hg19 CESC TCGA-EK-A2RO-01A 13 6 In-Frame Intra-chr p13.3 p13.3 Seq+ 68434 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NXN-ABR NXN chr17 882559 - ABR chr17 916404 - Exonic hg19 CESC TCGA-MY-A913-01A 59 23 In-Frame Intra-chr p13.3 p13.3 Seq+ 68435 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NXN-PRPSAP2 NXN chr17 882559 - PRPSAP2 chr17 18832124 + Exonic hg19 SARC TCGA-HB-A2OT-01A 3 1 In-Frame Intra-chr p13.3 p11.2 68436 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NXN-SLC43A2 NXN chr17 882559 - SLC43A2 chr17 1518328 - Exonic hg19 UCEC TCGA-A5-A7WK-01A 41 17 Out-of-frame Intra-chr p13.3 Seq+ 68437 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NXN-WRAP53 NXN chr17 882559 - WRAP53 chr17 7604059 + Exonic hg19 HNSC TCGA-CQ-7065-01A 108 43 In-Frame Intra-chr p13.3 p13.1 Seq+ 68438 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NXT1-VPS16 NXT1 chr20 23331698 - VPS16 chr20 2840365 + Exonic hg19 BRCA TCGA-E2-A109-01A 38 33 5'UTR-CDS Intra-chr p11.21 p13 Seq+ 68439 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq NXT2-COL4A5 NXT2 chrX 108784848 - COL4A5 chrX 107929261 + Exonic hg19 STAD TCGA-CD-A48C-01A 12 105 In-Frame Intra-chr q23 q22.3 Seq+ 68440 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OAF-APOA5 OAF chr11 120082218 - APOA5 chr11 116661783 - Exonic hg19 LIHC TCGA-BC-A217-01A 52 20 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 68441 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OAF-SLC26A11 OAF chr11 120097705 - SLC26A11 chr17 78215570 + Exonic hg19 HNSC TCGA-CV-5443-01A 19 1 In-Frame Inter-chr q23.3 q25.3 68442 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OAF-ZNF259 OAF chr11 120082218 - ZNF259 chr11 116658359 - Exonic hg19 LIHC TCGA-BC-A217-01A 7 9 In-Frame Intra-chr q23.3 Seq+ 68443 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OAS1-RPH3A OAS1 chr12 113349040 - RPH3A chr12 113307564 + Exonic hg19 CESC TCGA-VS-A9UB-01A 6 3 Out-of-frame Intra-chr q24.13 q24.13 Seq+ 68444 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OAS2-C12orf51 OAS2 chr12 113416590 - C12orf51 chr12 112757546 - Exonic hg19 LUSC TCGA-18-4083-01A 3 1 CDS-5'UTR Intra-chr q24.13 68445 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OAS3-ANXA1 OAS3 chr12 113411054 - ANXA1 chr9 75772570 + Exonic hg19 CESC TCGA-IR-A3LL-01A 2 7 Out-of-frame Inter-chr q24.13 q21.13 Tumor suppressor gene 68446 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OAS3-RPH3A OAS3 chr12 113403834 - RPH3A chr12 113325602 + Exonic hg19 BRCA TCGA-A8-A06X-01A 6 4 Out-of-frame Intra-chr q24.13 q24.13 Seq+ 68447 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OAZ1-YBX2 OAZ1 chr19 2269743 - YBX2 chr17 7195378 - Exonic hg19 LIHC TCGA-BC-A10Y-01A 718 408 In-Frame Inter-chr p13.3 p13.1 Transcription factor Seq+ 68448 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OAZ2-RBPMS2 OAZ2 chr15 64983633 - RBPMS2 chr15 65043837 - Exonic hg19 LGG TCGA-FG-A87Q-01A 3 5 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 68449 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OBFC1-COL17A1 OBFC1 chr10 105648830 - COL17A1 chr10 105795321 - Exonic hg19 STAD TCGA-VQ-A925-01A 5 42 In-Frame Intra-chr q25.1 Seq+ 68450 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OBFC1-PCGF3 OBFC1 chr10 105664849 - PCGF3 chr4 755067 + Exonic hg19 BLCA TCGA-GU-A42Q-01A 5 3 Out-of-frame Inter-chr p16.3 Seq+ 68451 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OBFC1-TM9SF3 OBFC1 chr10 105677220 - TM9SF3 chr10 98336586 - Exonic hg19 READ TCGA-CI-6624-01C 2 3 Out-of-frame Intra-chr q24.1 Seq+ 68452 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OBSCN-CASZ1 OBSCN chr1 228412435 - CASZ1 chr1 10725628 - Exonic hg19 HNSC TCGA-BB-4223-01A 7 4 In-Frame Intra-chr q42.13 p36.22 Transcription factor Seq+ 68453 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OBSCN-DISC1 OBSCN chr1 228434504 - DISC1 chr1 231829572 + Exonic hg19 SKCM TCGA-EB-A5SE-01A 15 7 In-Frame Intra-chr q42.13 q42.2 Seq+ 68454 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OBSCN-IGSF21 OBSCN chr1 228402799 - IGSF21 chr1 18554392 + Exonic hg19 BRCA TCGA-A1-A0SK-01A 4 2 In-Frame Intra-chr q42.13 p36.13 Seq+ 68455 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OBSCN-KCNK2 OBSCN chr1 228525084 - KCNK2 chr1 215368296 + Exonic hg19 SKCM TCGA-YD-A89C-06A 66 24 Out-of-frame Intra-chr q42.13 q41 Seq+ 68456 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OCA2-HERC2 OCA2 chr15 28326794 - HERC2 chr15 28370339 - Exonic hg19 SKCM TCGA-FS-A1ZQ-06A 15 9 Out-of-frame Intra-chr q13.1 Seq+ 68457 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OCEL1-SMARCA4 OCEL1 chr19 17338008 - SMARCA4 chr19 11094797 + Exonic hg19 BRCA TCGA-E9-A1N9-01A 2 1 CDS-5'UTR Intra-chr p13.11 p13.2 Oncogene Tumor suppressor gene Seq+ 68458 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OCEL1-USE1 OCEL1 chr19 17337125 - USE1 chr19 17330022 + Exonic hg19 UCEC TCGA-A5-A7WK-01A 34 12 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 68459 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OCIAD1-GLIPR2 OCIAD1 chr4 48833266 - GLIPR2 chr9 36162359 + Exonic hg19 HNSC TCGA-CN-A63U-01A 90 23 5'UTR-CDS Inter-chr p11 p13.3 Seq+ 68460 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OCIAD1-KIT OCIAD1 chr4 48859382 - KIT chr4 55589750 + Exonic hg19 UVM TCGA-V4-A9F7-01A 37 29 In-Frame Intra-chr p11 q12 TK:PDGFR Oncogene Seq+ 68461 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OCIAD2-NFXL1 OCIAD2 chr4 48896023 - NFXL1 chr4 47898664 - Exonic hg19 BLCA TCGA-FD-A3B8-01A 3 1 In-Frame Intra-chr p11 p12 Transcription factor 68462 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OCLN-CCNB1 OCLN chr5 68809936 - CCNB1 chr5 68467097 + Exonic hg19 BLCA TCGA-2F-A9KP-01A 16 19 In-Frame Intra-chr q13.2 q13.2 68463 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OCLN-CDK14 OCLN chr5 68809936 - CDK14 chr7 90836480 + Exonic hg19 PRAD TCGA-VP-A87D-01A 12 14 CDS-3'UTR Inter-chr q13.2 q21.13 Seq+ 68464 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OCLN-GPR98 OCLN chr5 68788486 - GPR98 chr5 90261232 + Exonic hg19 LIHC TCGA-CC-5263-01A 470 29 5'UTR-5'UTR Intra-chr q13.2 Seq+ 68465 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ODF2-SLC2A8 ODF2 chr9 131250304 - SLC2A8 chr9 130169715 + Exonic hg19 BRCA TCGA-BH-A0DS-01A 9 9 Out-of-frame Intra-chr q34.11 q33.3 Seq+ 68466 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ODF2L-F8 ODF2L chr1 86861716 - F8 chrX 154159951 - Exonic hg19 SKCM TCGA-FS-A1Z4-06A 6 4 5'UTR-CDS Inter-chr p22.3 q28 Seq+ 68467 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ODZ1-TMEM170A ODZ1 chrX 123695521 - TMEM170A chr16 75485737 - Exonic hg19 PRAD TCGA-XQ-A8TA-01A 2 3 In-Frame Inter-chr q23.1 68468 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ODZ2-CATSPER3 ODZ2 chr5 167303200 - CATSPER3 chr5 134331963 + Exonic hg19 HNSC TCGA-F7-A61V-01A 2 1 Out-of-frame Intra-chr q31.1 68469 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ODZ2-PCBD2 ODZ2 chr5 167303200 - PCBD2 chr5 134294730 + Exonic hg19 HNSC TCGA-F7-A61V-01A 4 3 Out-of-frame Intra-chr q31.1 68470 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ODZ2-RALGPS1 ODZ2 chr5 167420187 - RALGPS1 chr9 129972974 + Exonic hg19 MESO TCGA-LK-A4NY-01A 3 4 Out-of-frame Inter-chr q33.3 68471 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ODZ3-NR3C2 ODZ3 chr4 183370236 - NR3C2 chr4 149116013 - Exonic hg19 HNSC TCGA-QK-A8Z9-01B 2 2 Out-of-frame Intra-chr q31.23 Transcription factor 68472 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ODZ4-DPP3 ODZ4 chr11 79151553 - DPP3 chr11 66272083 + Exonic hg19 BLCA TCGA-FD-A62S-01A 3 4 5'UTR-CDS Intra-chr q13.2 68473 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ODZ4-GRIK4 ODZ4 chr11 78775783 - GRIK4 chr11 120811056 + Exonic hg19 LUAD TCGA-67-3774-01A 2 2 Out-of-frame Intra-chr q23.3 68474 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ODZ4-INTS4 ODZ4 chr11 78600830 - INTS4 chr11 77594998 - Exonic hg19 BRCA TCGA-BH-A0HY-01A 266 107 Out-of-frame Intra-chr q14.1 Seq+ 68475 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ODZ4-RBM4 ODZ4 chr11 78775783 - RBM4 chr11 66433327 + Exonic hg19 BRCA TCGA-BH-A1EN-01A 9 8 In-Frame Intra-chr q13.2 Tumor suppressor gene Seq+ 68476 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ODZ4-TMTC2 ODZ4 chr11 78372494 - TMTC2 chr12 83324210 + Exonic hg19 BRCA TCGA-A8-A0A9-01A 5 1 Out-of-frame Inter-chr q21.31 68477 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OGT-POLA1 OGT chrX 70757922 - POLA1 chrX 24828015 + Exonic hg19 PRAD TCGA-KK-A8IC-01A 3 2 In-Frame Intra-chr q13.1 p22.11 Seq+ 68478 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OIP5-NUSAP1 OIP5 chr15 41611856 - NUSAP1 chr15 41657600 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 3 1 Out-of-frame Intra-chr q15.1 q15.1 68479 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OLA1-CAB39 OLA1 chr2 174987908 - CAB39 chr2 231663444 + Exonic hg19 CHOL TCGA-W5-AA2U-01A 9 20 In-Frame Intra-chr q31.1 q37.1 Seq+ 68480 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OLA1-CIR1 OLA1 chr2 175087761 - CIR1 chr2 175216453 - Exonic hg19 ESCA TCGA-L5-A4OQ-01A 10 91 In-Frame Intra-chr q31.1 q31.1 Seq+ 68481 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OLA1-METTL8 OLA1 chr2 175087761 - METTL8 chr2 172217023 - Exonic hg19 BRCA TCGA-BH-A1FH-01A 3 5 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 68482 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OLFM2-CECR2 OLFM2 chr19 10046980 - CECR2 chr22 17956630 + Exonic hg19 UCS TCGA-NG-A4VU-01A 2 1 Out-of-frame Inter-chr p13.2 q11.1 68483 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OLFM2-CEP112 OLFM2 chr19 10046980 - CEP112 chr17 63685336 - Exonic hg19 BRCA TCGA-D8-A140-01A 8 9 In-Frame Inter-chr p13.2 q24.1 Seq+ 68484 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OLFM2-COL5A3 OLFM2 chr19 10046980 - COL5A3 chr19 10080358 - Exonic hg19 HNSC TCGA-CR-7388-01A 10 2 In-Frame Intra-chr p13.2 p13.2 Seq+ 68485 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OLFM2-CRTC1 OLFM2 chr19 10046980 - CRTC1 chr19 18853720 + Exonic hg19 UCS TCGA-N9-A4Q3-01A 8 2 In-Frame Intra-chr p13.2 p13.11 Oncogene Seq+ 68486 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OLFM2-EIF3G OLFM2 chr19 10046980 - EIF3G chr19 10226750 - Exonic hg19 STAD TCGA-CD-8525-01A 4 36 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 68487 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OLFM2-EXOSC10 OLFM2 chr19 10046980 - EXOSC10 chr1 11137708 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 19 18 In-Frame Inter-chr p13.2 p36.22 Seq+ 68488 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OLFM2-PSENEN OLFM2 chr19 10046980 - PSENEN chr19 36236736 + Exonic hg19 STAD TCGA-BR-7197-01A 3 6 CDS-5'UTR Intra-chr p13.2 q13.12 Seq+ 68489 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OLFM2-TBC1D21 OLFM2 chr19 10046980 - TBC1D21 chr15 74173985 + Exonic hg19 BRCA TCGA-AN-A0AR-01A 70 46 In-Frame Inter-chr p13.2 q24.1 Seq+ 68490 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OLFM2-TMEM205 OLFM2 chr19 10046980 - TMEM205 chr19 11456304 - Exonic hg19 OV TCGA-09-0366-01A 54 43 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 68491 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OLFM4-CLCN3 OLFM4 chr13 53626192 - CLCN3 chr4 170623929 + Exonic hg19 COAD TCGA-G4-6323-01A 2 9 Out-of-frame Inter-chr q14.3 Tumor suppressor gene q33 68492 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OLFM4-DYNC1H1 OLFM4 chr13 53626192 - DYNC1H1 chr14 102449356 + Exonic hg19 COAD TCGA-G4-6293-01A 2 1 3'UTR-CDS Inter-chr q14.3 Tumor suppressor gene q32.31 68493 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OLFM4-STAT6 OLFM4 chr13 53626192 - STAT6 chr12 57496773 - Exonic hg19 COAD TCGA-AA-A02Y-01A 2 26 Out-of-frame Inter-chr q14.3 Tumor suppressor gene q13.3 Transcription factor 68494 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OLFM4-TOP2B OLFM4 chr13 53626192 - TOP2B chr3 25674074 - Exonic hg19 PRAD TCGA-J4-A6G1-01A 2 3 3'UTR-CDS Inter-chr q14.3 Tumor suppressor gene p24.2 68495 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OPA1-ATP13A4 OPA1 chr3 193311198 - ATP13A4 chr3 193177020 - Exonic hg19 HNSC TCGA-CV-7434-01A 14 10 In-Frame Intra-chr q29 q29 Seq+ 68496 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OPA1-EHHADH OPA1 chr3 193361894 - EHHADH chr3 184947331 - Exonic hg19 LUSC TCGA-NC-A5HO-01A 2 1 In-Frame Intra-chr q29 q27.2 68497 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OPA1-PIGX OPA1 chr3 193311198 - PIGX chr3 196443729 + Exonic hg19 PRAD TCGA-KK-A6E2-01A 2 1 Out-of-frame Intra-chr q29 q29 68498 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OPA1-PPP2R3A OPA1 chr3 193385069 - PPP2R3A chr3 135863885 + Exonic hg19 LUSC TCGA-94-7943-01A 14 18 Out-of-frame Intra-chr q29 q22.2 Seq+ 68499 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OPA3-EML2 OPA3 chr19 46087881 - EML2 chr19 46145610 - Exonic hg19 HNSC TCGA-CV-6441-01A 20 11 In-Frame Intra-chr q13.32 q13.32 Seq+ 68500 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OPHN1-MAOA OPHN1 chrX 67412761 - MAOA chrX 43590488 + Exonic hg19 BRCA TCGA-C8-A273-01A 3 1 Out-of-frame Intra-chr q12 p11.3 Seq+ 68501 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OPHN1-TNMD OPHN1 chrX 67494580 - TNMD chrX 99848892 + Exonic hg19 BLCA TCGA-GU-A767-01A 3 3 In-Frame Intra-chr q12 q22.1 Seq+ 68502 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OPN3-SLC39A11 OPN3 chr1 241803184 - SLC39A11 chr17 70944014 - Exonic hg19 PRAD TCGA-KC-A7F5-01A 6 2 Out-of-frame Inter-chr q43 q25.1 Seq+ 68503 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OPRL1-PRPF6 OPRL1 chr20 62711705 - PRPF6 chr20 62641553 + Exonic hg19 BRCA TCGA-AR-A254-01A 56 25 5'UTR-CDS Intra-chr q13.33 Seq+ 68504 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OR51E2-C17orf48 OR51E2 chr11 4701401 - C17orf48 chr17 10608227 + Exonic hg19 PRAD TCGA-V1-A8MK-01A 2 1 3'UTR-5'UTR Inter-chr p15.4 68505 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ORAI2-CUX1 ORAI2 chr7 102074108 - CUX1 chr7 101671378 + Exonic hg19 LGG TCGA-DU-8165-01A 2 5 5'UTR-CDS Intra-chr q22.1 q22.1 Tumor suppressor gene Transcription factor Seq+ 68506 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ORAI2-SLC47A2 ORAI2 chr7 102079628 - SLC47A2 chr17 19584983 - Exonic hg19 PAAD TCGA-FB-AAPZ-01A 14 16 In-Frame Inter-chr q22.1 p11.2 Seq+ 68507 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ORAOV1-CCND1 ORAOV1 chr11 69489958 - CCND1 chr11 69457799 + Exonic hg19 HNSC TCGA-DQ-7589-01A 30 18 Out-of-frame Intra-chr q13.3 q13.3 Oncogene Seq+ 68508 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ORAOV1-NARS2 ORAOV1 chr11 69487984 - NARS2 chr11 78282489 - Exonic hg19 LUAD TCGA-MN-A4N1-01A 22 32 In-Frame Intra-chr q13.3 q14.1 Seq+ 68509 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ORC2-ALS2CR12 ORC2 chr2 201790559 - ALS2CR12 chr2 202173973 - Exonic hg19 BRCA TCGA-AN-A0XU-01A 3 5 Out-of-frame Intra-chr q33.1 q33.1 Seq+ 68510 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ORC2-TRAK2 ORC2 chr2 201814277 - TRAK2 chr2 202245941 - Exonic hg19 UCS TCGA-N5-A4RA-01A 6 3 Out-of-frame Intra-chr q33.1 q33.1 Seq+ 68511 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ORC4-MAPK4 ORC4 chr2 148709942 - MAPK4 chr18 48255528 + Exonic hg19 SKCM TCGA-EE-A2GU-06A 18 24 Out-of-frame Inter-chr q23.1 q21.1 Seq+ 68512 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ORC5-R3HDM2 ORC5 chr7 103835591 - R3HDM2 chr12 57789601 - Exonic hg19 PRAD TCGA-ZG-A8QZ-01A 5 5 CDS-5'UTR Inter-chr q22.2 q13.3 Seq+ 68513 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ORC6-VPS35 ORC6 chr16 46725032 - VPS35 chr16 46717518 - Exonic hg19 BRCA TCGA-E9-A22H-01A 3 12 In-Frame Intra-chr q11.2 q11.2 Seq+ 68514 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ORM2-ATP5G3 ORM2 chr9 117095532 - ATP5G3 chr2 176049335 - Exonic hg19 LIHC TCGA-DD-A4NB-01A 2 18 Out-of-frame Inter-chr q32 q31.1 68515 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ORMDL1-RALGDS ORMDL1 chr2 190648995 - RALGDS chr9 135979718 - Exonic hg19 COAD TCGA-DM-A28A-01A 7 9 5'UTR-CDS Inter-chr q32.2 q34.2 Oncogene Seq+ 68516 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ORMDL2-SARNP ORMDL2 chr12 56211896 - SARNP chr12 56151337 - Exonic hg19 SARC TCGA-DX-A2J1-01A 54 246 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 68517 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ORMDL3-ANXA1 ORMDL3 chr17 38077294 - ANXA1 chr9 75772570 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 2 2 Out-of-frame Inter-chr q21.1 q21.13 Tumor suppressor gene 68518 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ORMDL3-ZPBP2 ORMDL3 chr17 38080283 - ZPBP2 chr17 38026947 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 189 167 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 68519 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OS9-C12orf66 OS9 chr12 58090156 - C12orf66 chr12 64588438 - Exonic hg19 GBM TCGA-06-0174-01A 346 797 Out-of-frame Intra-chr q13.3 q14.2 Seq+ 68520 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OS9-ERBB3 OS9 chr12 58115338 - ERBB3 chr12 56492035 + Exonic hg19 THCA TCGA-DJ-A2Q4-01A 2 5 Out-of-frame Intra-chr q13.3 q13.2 Oncogene 68521 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OS9-HDLBP OS9 chr12 58114781 - HDLBP chr2 242254618 - Exonic hg19 PRAD TCGA-G9-6371-01A 2 1 Out-of-frame Inter-chr q13.3 q37.3 68522 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OS9-KIF5A OS9 chr12 58090156 - KIF5A chr12 57960909 + Exonic hg19 GBM TCGA-41-5651-01A 24 57 In-Frame Intra-chr q13.3 q13.3 Seq+ 68523 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBP-GAL OSBP chr11 59375957 - GAL chr11 68458385 + Exonic hg19 BRCA TCGA-A8-A06N-01A 4 5 Out-of-frame Intra-chr q12.1 q13.2 Seq+ 68524 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBP-GIF OSBP chr11 59361077 - GIF chr11 59597018 - Exonic hg19 ESCA TCGA-R6-A8W5-01B 4 153 In-Frame Intra-chr q12.1 q12.1 Seq+ 68525 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBP2-MRPL43 OSBP2 chr22 31137356 - MRPL43 chr10 102743574 - Exonic hg19 SKCM TCGA-EB-A42Z-01A 29 15 In-Frame Inter-chr q12.2 q24.31 Seq+ 68526 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBP2-TST OSBP2 chr22 31289720 - TST chr22 37407366 - Exonic hg19 PAAD TCGA-YB-A89D-01A 8 3 Out-of-frame Intra-chr q12.2 q12.3 68527 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL10-GPD1L OSBPL10 chr3 31917925 - GPD1L chr3 32207306 + Exonic hg19 BLCA TCGA-GV-A3JW-01A 19 12 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 68528 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL10-STX8 OSBPL10 chr3 31917925 - STX8 chr17 9153962 - Exonic hg19 UCS TCGA-N5-A59E-01A 13 7 Out-of-frame Inter-chr p22.3 p13.1 Seq+ 68529 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL11-CHCHD6 OSBPL11 chr3 125266250 - CHCHD6 chr3 126571487 + Exonic hg19 LUAD TCGA-78-7147-01A 2 2 Out-of-frame Intra-chr q21.2 q21.3 Seq+ 68530 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL1A-LETM2 OSBPL1A chr18 21977619 - LETM2 chr8 38257790 + Exonic hg19 BRCA TCGA-AN-A0XO-01A 4 3 5'UTR-CDS Inter-chr q11.2 p11.23 Seq+ 68531 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL1A-MYO16 OSBPL1A chr18 21819184 - MYO16 chr13 109772718 + Exonic hg19 HNSC TCGA-T3-A92M-01A 10 3 Out-of-frame Inter-chr q11.2 Seq+ 68532 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL1A-RIOK3 OSBPL1A chr18 21805006 - RIOK3 chr18 21053393 + Exonic hg19 HNSC TCGA-CQ-5332-01A 11 6 In-Frame Intra-chr q11.2 q11.2 Atypical:RIO Seq+ 68533 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL1A-SS18 OSBPL1A chr18 21977619 - SS18 chr18 23637706 - Exonic hg19 CESC TCGA-RA-A741-01A 12 7 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 68534 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL1A-ZNF521 OSBPL1A chr18 21805006 - ZNF521 chr18 22642705 - Exonic hg19 PAAD TCGA-HV-AA8X-01A 28 18 Out-of-frame Intra-chr q11.2 q11.2 Oncogene Transcription factor Seq+ 68535 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL2-CDH4 OSBPL2 chr20 60813653 - CDH4 chr20 60485478 + Exonic hg19 BLCA TCGA-GC-A3RB-01A 9 23 5'UTR-CDS Intra-chr q13.33 q13.33 Tumor suppressor gene Seq+ 68536 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL2-DLGAP4 OSBPL2 chr20 60813653 - DLGAP4 chr20 35152653 + Exonic hg19 LUAD TCGA-75-6211-01A 4 17 5'UTR-CDS Intra-chr q13.33 q11.23 Seq+ 68537 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL2-MARCH11 OSBPL2 chr20 60856221 - 2019_ 3_ 11_ chr5 16067902 - Exonic hg19 TGCT TCGA-2G-AAGX-01A 3 2 Out-of-frame Inter-chr q13.33 p15.1 68538 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL2-PLD1 OSBPL2 chr20 60838747 - PLD1 chr3 171338310 - Exonic hg19 BRCA TCGA-AO-A03P-01A 9 6 Out-of-frame Inter-chr q13.33 q26.31 Tumor suppressor gene Seq+ 68539 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL3-ABP1 OSBPL3 chr7 25019505 - ABP1 chr7 150549203 + Exonic hg19 SARC TCGA-DX-A8BR-01A 13 5 5'UTR-5'UTR Intra-chr p15.3 68540 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL3-ANO1 OSBPL3 chr7 25019505 - ANO1 chr11 69978025 + Exonic hg19 ESCA TCGA-VR-A8EU-01A 50 224 5'UTR-5'UTR Inter-chr p15.3 q13.3 Seq+ 68541 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL3-CORIN OSBPL3 chr7 24931996 - CORIN chr4 47746600 - Exonic hg19 BRCA TCGA-AQ-A04L-01B 6 4 Out-of-frame Inter-chr p15.3 p12 Seq+ 68542 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL3-GABRG3 OSBPL3 chr7 25019505 - GABRG3 chr15 27725796 + Exonic hg19 BRCA TCGA-BH-A208-01A 4 1 5'UTR-CDS Inter-chr p15.3 q12 Seq+ 68543 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL3-SLC2A1 OSBPL3 chr7 25019505 - SLC2A1 chr1 43408992 - Exonic hg19 SARC TCGA-DX-A8BS-01A 4 1 5'UTR-CDS Inter-chr p15.3 p34.2 68544 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL5-GPR114 OSBPL5 chr11 3140777 - GPR114 chr16 57595968 + Exonic hg19 BRCA TCGA-AO-A129-01A 2 2 CDS-5'UTR Inter-chr p15.4 Seq+ 68545 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL5-MRGPRE OSBPL5 chr11 3140777 - MRGPRE chr11 3250090 - Exonic hg19 STAD TCGA-CD-8535-01A 3 30 CDS-5'UTR Intra-chr p15.4 p15.4 Seq+ 68546 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL5-RHOG OSBPL5 chr11 3147703 - RHOG chr11 3849436 - Exonic hg19 BRCA TCGA-A2-A3XW-01A 17 46 CDS-5'UTR Intra-chr p15.4 p15.4 Seq+ 68547 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL8-ACSS3 OSBPL8 chr12 76844631 - ACSS3 chr12 81503339 + Exonic hg19 LUSC TCGA-33-4587-01A 7 1 Out-of-frame Intra-chr q21.2 q21.31 68548 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL8-CSRP2 OSBPL8 chr12 76844631 - CSRP2 chr12 77260041 - Exonic hg19 SARC TCGA-FX-A3NK-01A 27 19 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 68549 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL8-FAM186A OSBPL8 chr12 76953177 - FAM186A chr12 50727886 - Exonic hg19 SARC TCGA-DX-A1L4-01A 46 37 5'UTR-CDS Intra-chr q21.2 q13.12 Seq+ 68550 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL8-NTS OSBPL8 chr12 76844631 - NTS chr12 86270418 + Exonic hg19 SARC TCGA-3B-A9HL-01A 47 3 In-Frame Intra-chr q21.2 q21.31 68551 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL8-PTPRQ OSBPL8 chr12 76844631 - PTPRQ chr12 80998838 + Exonic hg19 SARC TCGA-FX-A3NK-01A 16 8 In-Frame Intra-chr q21.2 q21.31 Seq+ 68552 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL8-PTPRR OSBPL8 chr12 76953177 - PTPRR chr12 71158558 - Exonic hg19 BRCA TCGA-GM-A2DI-01A 4 1 5'UTR-CDS Intra-chr q21.2 q15 68553 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL8-RAB3IP OSBPL8 chr12 76953177 - RAB3IP chr12 70178500 + Exonic hg19 BRCA TCGA-BH-A0E2-01A 4 8 5'UTR-5'UTR Intra-chr q21.2 q15 Seq+ 68554 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL8-SYT1 OSBPL8 chr12 76953177 - SYT1 chr12 79371579 + Exonic hg19 SARC TCGA-FX-A3NK-01A 7 8 5'UTR-5'UTR Intra-chr q21.2 q21.2 Seq+ 68555 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL8-TSHZ2 OSBPL8 chr12 76844631 - TSHZ2 chr20 52103683 + Exonic hg19 BRCA TCGA-AN-A0FZ-01A 59 28 CDS-3'UTR Inter-chr q21.2 q13.2 Transcription factor Seq+ 68556 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL8-TSPAN8 OSBPL8 chr12 76844631 - TSPAN8 chr12 71835367 - Exonic hg19 PRAD TCGA-J4-A83J-01A 2 1 CDS-5'UTR Intra-chr q21.2 q21.1 68557 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL8-ZDHHC17 OSBPL8 chr12 76953177 - ZDHHC17 chr12 77199097 + Exonic hg19 SARC TCGA-DX-A3LY-01B 6 5 5'UTR-CDS Intra-chr q21.2 q21.2 Seq+ 68558 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL9-AGBL4 OSBPL9 chr1 52117713 - AGBL4 chr1 49056657 - Exonic hg19 BLCA TCGA-FD-A6TG-01A 15 5 In-Frame Intra-chr p32.3 p33 Seq+ 68559 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL9-C1orf87 OSBPL9 chr1 52117713 - C1orf87 chr1 60476128 - Exonic hg19 BRCA TCGA-E9-A1R7-01A 7 3 Out-of-frame Intra-chr p32.3 p32.1 Seq+ 68560 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL9-CERS5 OSBPL9 chr1 52179751 - CERS5 chr12 50537840 - Exonic hg19 BLCA TCGA-E7-A541-01A 3 2 Out-of-frame Inter-chr p32.3 q13.12 Seq+ 68561 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL9-FKBP5 OSBPL9 chr1 52082893 - FKBP5 chr6 35610620 - Exonic hg19 SARC TCGA-DX-AB3A-01A 19 19 5'UTR-5'UTR Inter-chr p32.3 p21.31 Seq+ 68562 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSBPL9-SERINC5 OSBPL9 chr1 52082893 - SERINC5 chr5 79454785 - Exonic hg19 PRAD TCGA-CH-5771-01A 11 9 Out-of-frame Inter-chr p32.3 q14.1 Seq+ 68563 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSCP1-NF1 OSCP1 chr1 36915859 - NF1 chr17 29701031 + Exonic hg19 MESO TCGA-UD-AAC4-01A 26 9 In-Frame Inter-chr p34.3 Tumor suppressor gene q11.2 Oncogene Tumor suppressor gene Seq+ 68564 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSCP1-WDTC1 OSCP1 chr1 36887751 - WDTC1 chr1 27614165 + Exonic hg19 UCS TCGA-N8-A4PP-01A 2 1 In-Frame Intra-chr p34.3 Tumor suppressor gene p36.11 68565 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSGIN2-RIPK2 OSGIN2 chr8 90926974 - RIPK2 chr8 90798821 + Exonic hg19 HNSC TCGA-CV-5430-01A 50 40 In-Frame Intra-chr q21.3 q21.3 TKL:RIPK Seq+ 68566 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSGIN2-RIPK2 OSGIN2 chr8 90926974 - RIPK2 chr8 90775057 + Exonic hg19 BRCA TCGA-OL-A6VO-01A 4 7 Out-of-frame Intra-chr q21.3 q21.3 TKL:RIPK Seq+ 68567 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSMR-DNM3 OSMR chr5 38869219 - DNM3 chr1 172050972 + Exonic hg19 SARC TCGA-DX-A6BG-01A 47 27 Out-of-frame Inter-chr p13.1 q24.3 Seq+ 68568 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSMR-NCKAP5 OSMR chr5 38886292 - NCKAP5 chr2 133554302 - Exonic hg19 LUAD TCGA-44-3918-01B 4 7 In-Frame Inter-chr p13.1 q21.2 68569 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSTF1-SMARCA4 OSTF1 chr9 77703642 - SMARCA4 chr19 11141406 + Exonic hg19 SARC TCGA-DX-A48N-01A 124 67 In-Frame Inter-chr q21.13 p13.2 Oncogene Tumor suppressor gene Seq+ 68570 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSTM1-C6orf204 OSTM1 chr6 108395454 - C6orf204 chr6 118953774 - Exonic hg19 BRCA TCGA-E9-A1RF-01A 13 6 Out-of-frame Intra-chr q21 68571 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OSTM1-SNX3 OSTM1 chr6 108395454 - SNX3 chr6 108544249 - Exonic hg19 BRCA TCGA-A2-A0SV-01A 23 10 In-Frame Intra-chr q21 q21 Seq+ 68572 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OTOGL-TRPV4 OTOGL chr12 80717620 - TRPV4 chr12 110252632 - Exonic hg19 SARC TCGA-DX-AB36-01A 8 11 CDS-5'UTR Intra-chr q21.31 q24.11 Seq+ 68573 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OTUB1-COX8A OTUB1 chr11 63756224 - COX8A chr11 63743697 + Exonic hg19 ESCA TCGA-L5-A891-01A 100 628 In-Frame Intra-chr q13.1 q13.1 Seq+ 68574 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OTUB1-DLG2 OTUB1 chr11 63753986 - DLG2 chr11 84245774 - Exonic hg19 SKCM TCGA-ER-A3ET-06A 3 6 Out-of-frame Intra-chr q13.1 q14.1 Seq+ 68575 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OTUB1-SUV420H1 OTUB1 chr11 63769283 - SUV420H1 chr11 67939176 - Exonic hg19 COAD TCGA-DM-A1D0-01A 84 18 3'UTR-CDS Intra-chr q13.1 68576 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OTUD5-GRIPAP1 OTUD5 chrX 48814239 - GRIPAP1 chrX 48855916 - Exonic hg19 LIHC TCGA-2Y-A9GZ-01A 7 2 In-Frame Intra-chr p11.23 p11.23 68577 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OTUD7B-CTSS OTUD7B chr1 149949361 - CTSS chr1 150705621 - Exonic hg19 LUSC TCGA-68-7755-01A 209 163 Out-of-frame Intra-chr q21.2 q21.3 Seq+ 68578 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OTUD7B-HORMAD1 OTUD7B chr1 149949361 - HORMAD1 chr1 150692014 - Exonic hg19 LUSC TCGA-68-7755-01A 9 7 CDS-5'UTR Intra-chr q21.2 q21.3 Seq+ 68579 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OTX1-EHBP1 OTX1 chr2 63281333 - EHBP1 chr2 63206323 + Exonic hg19 STAD TCGA-BR-8590-01A 4 5 In-Frame Intra-chr p15 Transcription factor p15 Seq+ 68580 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OVOL2-CBLN4 OVOL2 chr20 18022178 - CBLN4 chr20 54575903 - Exonic hg19 BLCA TCGA-FD-A6TC-01A 2 4 Out-of-frame Intra-chr p11.23 Transcription factor q13.2 Seq+ 68581 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OVOL2-KIAA0922 OVOL2 chr20 18037301 - KIAA0922 chr4 154553870 + Exonic hg19 BRCA TCGA-C8-A1HN-01A 9 4 Out-of-frame Inter-chr p11.23 Transcription factor q31.3 Seq+ 68582 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OXCT1-AC008810.1 OXCT1 chr5 41794105 - AC008810.1 chr5 40777688 - Exonic hg19 SKCM TCGA-EB-A44Q-06A 23 17 Out-of-frame Intra-chr p13.1 68583 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OXCT1-GHR OXCT1 chr5 41840553 - GHR chr5 42565966 + Exonic hg19 SKCM TCGA-D3-A1Q3-06A 5 2 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 68584 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OXCT1-TMEM17 OXCT1 chr5 41870383 - TMEM17 chr2 62729929 - Exonic hg19 LUSC TCGA-63-5131-01A 4 4 Out-of-frame Inter-chr p13.1 p15 Seq+ 68585 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OXNAD1-LRRTM4 OXNAD1 chr3 16327955 - LRRTM4 chr2 76976042 - Exonic hg19 BRCA TCGA-AR-A0TZ-01A 27 18 Out-of-frame Inter-chr p25.1 p12 Seq+ 68586 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OXR1-CSMD3 OXR1 chr8 107726213 - CSMD3 chr8 114327022 - Exonic hg19 BRCA TCGA-AC-A6IX-01A 9 3 Out-of-frame Intra-chr q23.1 q23.3 Oncogene Seq+ 68587 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OXR1-MET OXR1 chr8 107726213 - MET chr7 116411552 + Exonic hg19 LIHC TCGA-RC-A6M6-01A 8 8 In-Frame Inter-chr q23.1 q31.2 TK:Met Oncogene Seq+ 68588 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OXR1-VPS13B OXR1 chr8 107371864 - VPS13B chr8 100711753 + Exonic hg19 HNSC TCGA-CN-A63W-01A 2 2 Out-of-frame Intra-chr q23.1 q22.2 Seq+ 68589 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OXSR1-ATXN7 OXSR1 chr3 38232330 - ATXN7 chr3 63938055 + Exonic hg19 SKCM TCGA-FS-A1ZZ-06A 16 9 In-Frame Intra-chr p22.2 p14.1 Seq+ 68590 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OXSR1-CTDSPL OXSR1 chr3 38263178 - CTDSPL chr3 37998602 + Exonic hg19 LUAD TCGA-91-7771-01A 4 7 In-Frame Intra-chr p22.2 p22.2 Tumor suppressor gene Seq+ 68591 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OXSR1-DLEC1 OXSR1 chr3 38232330 - DLEC1 chr3 38153168 + Exonic hg19 UCEC TCGA-PG-A914-01A 9 5 Out-of-frame Intra-chr p22.2 p22.2 Tumor suppressor gene Seq+ 68592 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OXSR1-MYD88 OXSR1 chr3 38232330 - MYD88 chr3 38182248 + Exonic hg19 LUSC TCGA-52-7809-01A 4 5 In-Frame Intra-chr p22.2 p22.2 Oncogene Seq+ 68593 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq OXSR1-PDCD6IP OXSR1 chr3 38271226 - PDCD6IP chr3 33870330 + Exonic hg19 SARC TCGA-LI-A9QH-01A 2 1 In-Frame Intra-chr p22.2 p22.3 68594 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P2RY6-MRPS35 P2RY6 chr11 72975694 - MRPS35 chr12 27890472 + Exonic hg19 BLCA TCGA-XF-AAMW-01A 5 3 5'UTR-CDS Inter-chr q13.4 p11.22 Seq+ 68595 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P4HA1-CCDC102A P4HA1 chr10 74833489 - CCDC102A chr16 57555088 - Exonic hg19 LIHC TCGA-BC-A10T-01A 4 1 In-Frame Inter-chr q22.1 q21 Seq+ 68596 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P4HA1-CTNNA3 P4HA1 chr10 74831787 - CTNNA3 chr10 69299427 - Exonic hg19 PRAD TCGA-CH-5771-01A 2 4 In-Frame Intra-chr q22.1 q21.3 Tumor suppressor gene Seq+ 68597 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P4HA1-NODAL P4HA1 chr10 74828604 - NODAL chr10 72195739 - Exonic hg19 PRAD TCGA-EJ-5532-01A 2 1 In-Frame Intra-chr q22.1 q22.1 68598 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P4HA1-TTC18 P4HA1 chr10 74856524 - TTC18 chr10 75059423 - Exonic hg19 UCEC TCGA-EO-A3KW-01A 8 3 5'UTR-CDS Intra-chr q22.1 68599 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P4HB-C7 P4HB chr17 79801042 - C7 chr5 40954982 + Exonic hg19 PRAD TCGA-EJ-7125-01A 2 57 Out-of-frame Inter-chr q25.3 p13.1 Tumor suppressor gene 68600 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P4HB-CCT5 P4HB chr17 79801037 - CCT5 chr5 10250033 + Exonic hg19 PRAD TCGA-G9-6366-01A 3 2 Out-of-frame Inter-chr q25.3 p15.2 68601 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P4HB-CLCN3 P4HB chr17 79801037 - CLCN3 chr4 170623929 + Exonic hg19 BLCA TCGA-E7-A677-01A 2 28 Out-of-frame Inter-chr q25.3 q33 68602 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P4HB-CSDA P4HB chr17 79801042 - CSDA chr12 10871742 - Exonic hg19 HNSC TCGA-CR-7383-01A 2 9 3'UTR-CDS Inter-chr q25.3 68603 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P4HB-CTSF P4HB chr17 79801042 - CTSF chr11 66334990 - Exonic hg19 PRAD TCGA-KC-A7F5-01A 2 2 Out-of-frame Inter-chr q25.3 q13.2 68604 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P4HB-ERBB3 P4HB chr17 79801042 - ERBB3 chr12 56492035 + Exonic hg19 ACC TCGA-PK-A5H9-01A 2 18 Out-of-frame Inter-chr q25.3 q13.2 Oncogene 68605 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P4HB-FAR1 P4HB chr17 79801037 - FAR1 chr11 13744912 + Exonic hg19 PRAD TCGA-HC-7210-01A 2 5 Out-of-frame Inter-chr q25.3 p15.3 68606 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P4HB-L3MBTL4 P4HB chr17 79813018 - L3MBTL4 chr18 6093527 - Exonic hg19 LUSC TCGA-NC-A5HF-01A 39 30 Out-of-frame Inter-chr q25.3 p11.31 Tumor suppressor gene Transcription factor Seq+ 68607 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P4HB-MYO6 P4HB chr17 79801037 - MYO6 chr6 76595721 + Exonic hg19 PRAD TCGA-EJ-7784-01A 2 4 3'UTR-CDS Inter-chr q25.3 q14.1 68608 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P4HB-NDUFV1 P4HB chr17 79801037 - NDUFV1 chr11 67375697 + Exonic hg19 PRAD TCGA-EJ-5525-01A 2 11 Out-of-frame Inter-chr q25.3 q13.2 68609 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P4HB-NDUFV1 P4HB chr17 79801037 - NDUFV1 chr11 67375697 + Exonic hg19 PRAD TCGA-EJ-A46G-01A 2 56 Out-of-frame Inter-chr q25.3 q13.2 68610 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P4HB-NHP2L1 P4HB chr17 79801042 - NHP2L1 chr22 42071199 - Exonic hg19 PRAD TCGA-EJ-7782-01A 2 20 3'UTR-CDS Inter-chr q25.3 68611 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P4HB-NHP2L1 P4HB chr17 79801042 - NHP2L1 chr22 42071199 - Exonic hg19 PRAD TCGA-EJ-7791-01A 2 38 3'UTR-CDS Inter-chr q25.3 68612 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P4HB-PLAT P4HB chr17 79801042 - PLAT chr8 42051245 - Exonic hg19 CESC TCGA-EA-A5FO-01A 2 25 Out-of-frame Inter-chr q25.3 p11.21 68613 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P4HB-PLEKHA5 P4HB chr17 79801037 - PLEKHA5 chr12 19441012 + Exonic hg19 BRCA TCGA-D8-A1JI-01A 2 20 Out-of-frame Inter-chr q25.3 p12.3 68614 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P4HB-SEC63 P4HB chr17 79801037 - SEC63 chr6 108214782 - Exonic hg19 PRAD TCGA-HC-8256-01A 2 7 Out-of-frame Inter-chr q25.3 q21 68615 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P4HB-SNW1 P4HB chr17 79801037 - SNW1 chr14 78189203 - Exonic hg19 KIRC TCGA-CZ-5469-01A 2 2 Out-of-frame Inter-chr q25.3 q24.3 68616 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P4HB-SOS1 P4HB chr17 79801042 - SOS1 chr2 39222528 - Exonic hg19 LGG TCGA-E1-5318-01A 2 2 3'UTR-CDS Inter-chr q25.3 p22.1 68617 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P4HB-TPT1 P4HB chr17 79801410 - TPT1 chr13 45915293 - Exonic hg19 LUAD TCGA-69-8255-01A 2 1 Out-of-frame Inter-chr q25.3 q14.13 68618 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P4HB-ZFP91 P4HB chr17 79801042 - ZFP91 chr11 58380235 + Exonic hg19 PRAD TCGA-KK-A7AP-01A 2 7 3'UTR-CDS Inter-chr q25.3 q12.1 Transcription factor 68619 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P4HB-ZNFX1 P4HB chr17 79801042 - ZNFX1 chr20 47863418 - Exonic hg19 BLCA TCGA-G2-A2ES-01A 2 6 Out-of-frame Inter-chr q25.3 q13.13 68620 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq P4HTM-C16orf73 P4HTM chr3 49028347 - C16orf73 chr16 1884367 - Exonic hg19 BRCA TCGA-AC-A3TM-01A 10 4 Out-of-frame Inter-chr p21.31 68621 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PA2G4-MARK1 PA2G4 chr12 56498609 - MARK1 chr1 220752696 + Exonic hg19 SARC TCGA-DX-A3LY-01B 20 27 Out-of-frame Inter-chr q13.2 Transcription factor q41 CAMK:CAMKL Oncogene Seq+ 68622 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PA2G4-RAB5B PA2G4 chr12 56503719 - RAB5B chr12 56385881 + Exonic hg19 UCEC TCGA-AJ-A3BF-01A 2 22 Out-of-frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 68623 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAAF1-NCR3 PAAF1 chr11 73588113 - NCR3 chr6 31557676 - Exonic hg19 SARC TCGA-DX-A23Z-01A 8 6 Out-of-frame Inter-chr q13.4 Seq+ 68624 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PABPC1-VPS13B PABPC1 chr8 101716525 - VPS13B chr8 100779002 + Exonic hg19 BLCA TCGA-4Z-AA7S-01A 5 168 3'UTR-CDS Intra-chr q22.3 q22.2 Seq+ 68625 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PABPC1L-PKIG PABPC1L chr20 43561826 - PKIG chr20 43227257 + Exonic hg19 UCEC TCGA-AX-A2H4-01A 6 2 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 68626 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PABPC4-MACF1 PABPC4 chr1 40034474 - MACF1 chr1 39916724 + Exonic hg19 SARC TCGA-DX-A48U-01A 7 5 Out-of-frame Intra-chr p34.3 p34.3 Seq+ 68627 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PABPN1-BCL2L2 PABPN1 chr14 23792692 - BCL2L2 chr14 23780182 + Exonic hg19 BRCA TCGA-A1-A0SO-01A 11 25 Out-of-frame Intra-chr q11.2 q11.2 Oncogene Seq+ 68628 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PACS1-C1orf201 PACS1 chr11 65838313 - C1orf201 chr1 24687531 - Exonic hg19 BLCA TCGA-DK-AA75-01A 11 8 In-Frame Inter-chr q13.1 Seq+ 68629 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PACS1-CHKA PACS1 chr11 65838313 - CHKA chr11 67821514 - Exonic hg19 LUSC TCGA-85-8276-01A 8 5 Out-of-frame Intra-chr q13.1 q13.2 Seq+ 68630 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PACS1-FAM32A PACS1 chr11 65838313 - FAM32A chr19 16296435 + Exonic hg19 STAD TCGA-BR-8590-01A 5 12 In-Frame Inter-chr q13.1 p13.11 Seq+ 68631 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PACS1-PPP2R5B PACS1 chr11 65838313 - PPP2R5B chr11 64693320 + Exonic hg19 UCS TCGA-NA-A5I1-01A 2 1 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 68632 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PACS1-ZDHHC24 PACS1 chr11 65838313 - ZDHHC24 chr11 66311452 - Exonic hg19 BRCA TCGA-C8-A135-01A 22 16 In-Frame Intra-chr q13.1 q13.2 Seq+ 68633 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PACS1-ZDHHC24 PACS1 chr11 65838313 - ZDHHC24 chr11 66311452 - Exonic hg19 BLCA TCGA-DK-A3X1-01A 4 1 In-Frame Intra-chr q13.1 q13.2 Seq+ 68634 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PACSIN2-CERK PACSIN2 chr22 43342903 - CERK chr22 47083103 - Exonic hg19 SKCM TCGA-FS-A4F4-06A 19 10 5'UTR-CDS Intra-chr q13.2 q13.31 Seq+ 68635 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PACSIN2-EEFSEC PACSIN2 chr22 43342903 - EEFSEC chr3 128126912 + Exonic hg19 SKCM TCGA-EE-A3J4-06A 7 4 5'UTR-CDS Inter-chr q13.2 q21.3 Seq+ 68636 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PACSIN2-LGALS1 PACSIN2 chr22 43272143 - LGALS1 chr22 38072993 + Exonic hg19 STAD TCGA-BR-8295-01A 2 12 Out-of-frame Intra-chr q13.2 q13.1 Seq+ 68637 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PACSIN2-MCAT PACSIN2 chr22 43411027 - MCAT chr22 43537255 - Exonic hg19 UCEC TCGA-AP-A5FX-01A 6 1 5'UTR-CDS Intra-chr q13.2 q13.2 68638 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PACSIN2-NUPL2 PACSIN2 chr22 43308027 - NUPL2 chr7 23224689 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 15 10 Out-of-frame Inter-chr q13.2 p15.3 Seq+ 68639 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PACSIN2-RAI14 PACSIN2 chr22 43411027 - RAI14 chr5 34686977 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 19 11 5'UTR-5'UTR Inter-chr q13.2 p13.2 Seq+ 68640 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PACSIN2-SPON1 PACSIN2 chr22 43308027 - SPON1 chr11 14264878 + Exonic hg19 UCS TCGA-N5-A4RD-01A 6 1 In-Frame Inter-chr q13.2 p15.2 68641 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PACSIN2-TTLL1 PACSIN2 chr22 43411027 - TTLL1 chr22 43447893 - Exonic hg19 LUAD TCGA-49-AARQ-01A 62 45 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 68642 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PACSIN2-TTLL1 PACSIN2 chr22 43308027 - TTLL1 chr22 43435911 - Exonic hg19 LUAD TCGA-50-6597-01A 57 59 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 68643 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PACSIN2-TTLL1 PACSIN2 chr22 43411027 - TTLL1 chr22 43447893 - Exonic hg19 UCEC TCGA-BK-A139-02A 107 72 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 68644 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PACSIN2-TTLL12 PACSIN2 chr22 43308027 - TTLL12 chr22 43579155 - Exonic hg19 STAD TCGA-CD-8532-01A 2 4 In-Frame Intra-chr q13.2 q13.2 68645 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PACSIN2-ZNF823 PACSIN2 chr22 43308027 - ZNF823 chr19 11836142 - Exonic hg19 BRCA TCGA-AR-A24Z-01A 19 10 In-Frame Inter-chr q13.2 p13.2 Transcription factor Seq+ 68646 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PADI2-EXD3 PADI2 chr1 17422404 - EXD3 chr9 140218595 - Exonic hg19 STAD TCGA-HU-A4HD-01A 4 125 In-Frame Inter-chr p36.13 q34.3 Seq+ 68647 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAEP-FAR1 PAEP chr9 138458622 - FAR1 chr11 13744912 + Exonic hg19 KIRC TCGA-B0-5706-01A 2 52 Out-of-frame Inter-chr q34.3 Tumor suppressor gene p15.3 68648 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAFAH1B1-ABR PAFAH1B1 chr17 2497300 - ABR chr17 962107 - Exonic hg19 SKCM TCGA-YG-AA3O-06A 13 37 5'UTR-CDS Intra-chr p13.3 Tumor suppressor gene p13.3 Seq+ 68649 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAFAH1B1-CTDNEP1 PAFAH1B1 chr17 2497300 - CTDNEP1 chr17 7150662 - Exonic hg19 SKCM TCGA-ER-A197-06A 28 94 5'UTR-CDS Intra-chr p13.3 Tumor suppressor gene p13.1 Seq+ 68650 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAFAH1B2-GPR137 PAFAH1B2 chr11 117023244 - GPR137 chr11 64053982 + Exonic hg19 LUAD TCGA-69-7765-01A 3 1 In-Frame Intra-chr q23.3 q13.1 68651 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAFAH1B2-MRPL2 PAFAH1B2 chr11 117015134 - MRPL2 chr6 43025971 - Exonic hg19 CHOL TCGA-3X-AAVC-01A 18 9 5'UTR-CDS Inter-chr q23.3 p21.1 Seq+ 68652 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAG1-GAD2 PAG1 chr8 81942231 - GAD2 chr10 26562565 + Exonic hg19 LUSC TCGA-51-6867-01A 3 1 5'UTR-CDS Inter-chr q21.13 p12.1 68653 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAG1-KIAA1429 PAG1 chr8 81942231 - KIAA1429 chr8 95527179 - Exonic hg19 BLCA TCGA-ZF-A9RL-01A 7 3 5'UTR-CDS Intra-chr q21.13 q22.1 Seq+ 68654 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAH-METAP2 PAH chr12 103288513 - METAP2 chr12 95906577 + Exonic hg19 ACC TCGA-OR-A5JA-01A 6 7 Out-of-frame Intra-chr q23.2 q22 Seq+ 68655 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAH-NINJ2 PAH chr12 103306569 - NINJ2 chr12 675344 - Exonic hg19 BRCA TCGA-OL-A66I-01A 20 4 In-Frame Intra-chr q23.2 p13.33 Seq+ 68656 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAICS-PDGFRA PAICS chr4 57302494 - PDGFRA chr4 55136800 + Exonic hg19 LGG TCGA-E1-A7YD-01A 3 6 Out-of-frame Intra-chr q12 q12 Oncogene Seq+ 68657 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAIP1-DAB2 PAIP1 chr5 43555932 - DAB2 chr5 39375186 - Exonic hg19 OV TCGA-13-1506-01A 4 7 In-Frame Intra-chr p12 p13.1 Tumor suppressor gene Seq+ 68658 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAIP2-CDC25C PAIP2 chr5 138677669 - CDC25C chr5 137627805 - Exonic hg19 KIRC TCGA-BP-5175-01A 47 7 5'UTR-CDS Intra-chr q31.2 Tumor suppressor gene q31.2 Seq+ 68659 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAIP2-SIL1 PAIP2 chr5 138677669 - SIL1 chr5 138386735 - Exonic hg19 SARC TCGA-DX-A48P-01A 121 45 5'UTR-CDS Intra-chr q31.2 Tumor suppressor gene q31.2 Seq+ 68660 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAK1-ARHGEF18 PAK1 chr11 77043775 - ARHGEF18 chr19 7521213 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 2 2 Out-of-frame Inter-chr q14.1 STE:STE20 p13.2 Seq+ 68661 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAK1-C11orf67 PAK1 chr11 77085373 - C11orf67 chr11 77580768 + Exonic hg19 STAD TCGA-RD-A8N4-01A 5 14 In-Frame Intra-chr q14.1 STE:STE20 Seq+ 68662 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAK1-CNIH4 PAK1 chr11 77103376 - CNIH4 chr1 224553581 + Exonic hg19 LUAD TCGA-78-7161-01A 44 16 Out-of-frame Inter-chr q14.1 STE:STE20 q42.11 Seq+ 68663 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAK1-CWF19L2 PAK1 chr11 77184597 - CWF19L2 chr11 107326502 - Exonic hg19 BRCA TCGA-XX-A899-01A 20 19 5'UTR-CDS Intra-chr q14.1 STE:STE20 q22.3 Seq+ 68664 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAK1-ERG PAK1 chr11 77184597 - ERG chr21 39956869 - Exonic hg19 BRCA TCGA-LL-A441-01A 2 1 5'UTR-5'UTR Inter-chr q14.1 STE:STE20 q22.2 Oncogene Transcription factor 68665 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAK1-KCTD14 PAK1 chr11 77090286 - KCTD14 chr11 77749804 - Exonic hg19 BRCA TCGA-AN-A03Y-01A 107 40 CDS-5'UTR Intra-chr q14.1 STE:STE20 q14.1 Seq+ 68666 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAK1-LNP1 PAK1 chr11 77184597 - LNP1 chr3 100148541 + Exonic hg19 LUSC TCGA-56-A4BX-01A 42 28 5'UTR-5'UTR Inter-chr q14.1 STE:STE20 q12.2 Seq+ 68667 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAK1-MYO7A PAK1 chr11 77184597 - MYO7A chr11 76841635 + Exonic hg19 BRCA TCGA-BH-A201-01A 11 23 5'UTR-5'UTR Intra-chr q14.1 STE:STE20 q13.5 Seq+ 68668 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAK1-NARS2 PAK1 chr11 77184597 - NARS2 chr11 78282489 - Exonic hg19 PRAD TCGA-EJ-A46G-01A 22 20 5'UTR-5'UTR Intra-chr q14.1 STE:STE20 q14.1 Seq+ 68669 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAK1-PDGFD PAK1 chr11 77184597 - PDGFD chr11 103818452 - Exonic hg19 SKCM TCGA-GN-A26D-06A 26 27 5'UTR-CDS Intra-chr q14.1 STE:STE20 q22.3 Seq+ 68670 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAK1-PRSS23 PAK1 chr11 77103376 - PRSS23 chr11 86534419 + Exonic hg19 BRCA TCGA-E2-A10E-01A 5 3 CDS-3'UTR Intra-chr q14.1 STE:STE20 q14.2 Seq+ 68671 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAK1-SHANK2 PAK1 chr11 77184597 - SHANK2 chr11 70507783 - Exonic hg19 BRCA TCGA-XX-A899-01A 48 43 5'UTR-CDS Intra-chr q14.1 STE:STE20 q13.4 Seq+ 68672 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAK1IP1-MEP1A PAK1IP1 chr6 10702872 - MEP1A chr6 46787266 + Exonic hg19 SKCM TCGA-GN-A268-06A 132 50 In-Frame Intra-chr p24.2 p12.3 Seq+ 68673 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAK2-DLG1 PAK2 chr3 196532254 - DLG1 chr3 196888609 - Exonic hg19 OV TCGA-25-1328-01A 6 10 In-Frame Intra-chr q29 STE:STE20 q29 Tumor suppressor gene Seq+ 68674 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAK2-ECE2 PAK2 chr3 196467028 - ECE2 chr3 183975261 + Exonic hg19 LUSC TCGA-66-2756-01A 14 26 5'UTR-CDS Intra-chr q29 STE:STE20 q27.1 Seq+ 68675 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAK3-SH2D1A PAK3 chrX 110366506 - SH2D1A chrX 123499611 + Exonic hg19 CESC TCGA-IR-A3LB-01A 2 1 Out-of-frame Intra-chr q23 STE:STE20 Oncogene q25 Oncogene 68676 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAK4-AC011443.1 PAK4 chr19 39616559 - AC011443.1 chr19 39575732 + Exonic hg19 BRCA TCGA-AC-A8OP-01A 7 1 Out-of-frame Intra-chr q13.2 STE:STE20 q13.2 68677 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAK4-AC011443.1 PAK4 chr19 39616559 - AC011443.1 chr19 39575732 + Exonic hg19 UCEC TCGA-PG-A5BC-01A 8 2 Out-of-frame Intra-chr q13.2 STE:STE20 q13.2 68678 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAK4-B9D1 PAK4 chr19 39616559 - B9D1 chr17 19251193 - Exonic hg19 PAAD TCGA-L1-A7W4-01A 56 24 5'UTR-CDS Inter-chr q13.2 STE:STE20 p11.2 Seq+ 68679 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAK4-CATSPERG PAK4 chr19 39616559 - CATSPERG chr19 38848918 + Exonic hg19 BRCA TCGA-D8-A1XZ-01A 40 28 5'UTR-CDS Intra-chr q13.2 STE:STE20 q13.2 Seq+ 68680 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAK4-HEATR8 PAK4 chr19 39616559 - HEATR8 chr1 55182273 + Exonic hg19 BRCA TCGA-E2-A14R-01A 4 2 Out-of-frame Inter-chr q13.2 STE:STE20 68681 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAK4-RPGR PAK4 chr19 39616559 - RPGR chrX 38150737 - Exonic hg19 UCS TCGA-N8-A4PN-01A 14 4 5'UTR-CDS Inter-chr q13.2 STE:STE20 p11.4 Seq+ 68682 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAK4-SPINT2 PAK4 chr19 39616559 - SPINT2 chr19 38774267 + Exonic hg19 BRCA TCGA-EW-A2FV-01A 27 49 5'UTR-CDS Intra-chr q13.2 STE:STE20 q13.2 Tumor suppressor gene Seq+ 68683 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PALLD-ANXA10 PALLD chr4 169553051 - ANXA10 chr4 169083679 + Exonic hg19 SARC TCGA-DX-A8BJ-01A 9 1 5'UTR-CDS Intra-chr q32.3 q32.3 Seq+ 68684 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PALLD-NAA15 PALLD chr4 169589519 - NAA15 chr4 140291365 + Exonic hg19 BRCA TCGA-AN-A04C-01A 91 86 In-Frame Intra-chr q32.3 q31.1 Seq+ 68685 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PALLD-TMEM53 PALLD chr4 169753322 - TMEM53 chr1 45125967 - Exonic hg19 BLCA TCGA-ZF-AA58-01A 63 27 5'UTR-CDS Inter-chr q32.3 p34.1 Seq+ 68686 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PALM2-MLLT3 PALM2 chr9 112542813 - MLLT3 chr9 20456784 - Exonic hg19 LGG TCGA-FG-A87N-01A 7 1 Out-of-frame Intra-chr q31.3 p21.3 Seq+ 68687 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAM16-CORO7 PAM16 chr16 4401233 - CORO7 chr16 4415546 - Exonic hg19 BRCA TCGA-B6-A0RT-01A 9 4 Out-of-frame Intra-chr p13.3 p13.3 68688 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAM16-PITPNM3 PAM16 chr16 4401233 - PITPNM3 chr17 6387612 - Exonic hg19 PCPG TCGA-QR-A70I-01A 8 10 Out-of-frame Inter-chr p13.3 p13.1 Seq+ 68689 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAN2-MIP PAN2 chr12 56726597 - MIP chr12 56847539 - Exonic hg19 OV TCGA-24-1553-01A 3 3 In-Frame Intra-chr q13.3 q13.3 Seq+ 68690 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAN3-EFHA1 PAN3 chr13 28794515 - EFHA1 chr13 22096789 - Exonic hg19 SARC TCGA-X6-A7W8-01A 3 11 In-Frame Intra-chr q12.2 Seq+ 68691 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAN3-FLT3 PAN3 chr13 28752072 - FLT3 chr13 28644749 - Exonic hg19 COAD TCGA-AA-3712-01A 11 16 Out-of-frame Intra-chr q12.2 q12.2 TK:PDGFR Oncogene Tumor suppressor gene Seq+ 68692 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAN3-FLT3 PAN3 chr13 28713224 - FLT3 chr13 28644749 - Exonic hg19 SARC TCGA-HS-A5NA-01A 4 6 In-Frame Intra-chr q12.2 q12.2 TK:PDGFR Oncogene Tumor suppressor gene Seq+ 68693 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAN3-KATNAL1 PAN3 chr13 28752072 - KATNAL1 chr13 30857928 - Exonic hg19 READ TCGA-DC-6154-01A 8 9 CDS-5'UTR Intra-chr q12.2 q12.3 Seq+ 68694 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAN3-LATS2 PAN3 chr13 28713224 - LATS2 chr13 21557945 - Exonic hg19 READ TCGA-DC-6154-01A 15 18 Out-of-frame Intra-chr q12.2 q12.11 AGC:NDR Tumor suppressor gene Seq+ 68695 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAN3-MTMR6 PAN3 chr13 28771483 - MTMR6 chr13 25802719 - Exonic hg19 READ TCGA-F5-6571-01A 8 5 Out-of-frame Intra-chr q12.2 q12.13 68696 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAN3-NTRK2 PAN3 chr13 28713224 - NTRK2 chr9 87549077 + Exonic hg19 HNSC TCGA-BB-4223-01A 4 8 In-Frame Inter-chr q12.2 q21.33 Oncogene Seq+ 68697 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAN3-XPO4 PAN3 chr13 28794515 - XPO4 chr13 21358058 - Exonic hg19 BLCA TCGA-UY-A9PD-01A 16 6 Out-of-frame Intra-chr q12.2 q12.11 68698 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PANK1-C8orf34 PANK1 chr10 91404357 - C8orf34 chr8 69621229 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 7 4 Out-of-frame Inter-chr q23.31 q13.2 Seq+ 68699 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PANK1-CRYBB1 PANK1 chr10 91404357 - CRYBB1 chr22 27008154 - Exonic hg19 SARC TCGA-JV-A75J-01A 22 38 Out-of-frame Inter-chr q23.31 q12.1 Seq+ 68700 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PANK1-PDK3 PANK1 chr10 91404357 - PDK3 chrX 24523326 + Exonic hg19 PRAD TCGA-EJ-7327-01A 2 1 In-Frame Inter-chr q23.31 p22.11 68701 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PANK2-LANCL1 PANK2 chr20 3870375 - LANCL1 chr2 211336800 - Exonic hg19 SARC TCGA-FX-A3NK-01A 4 1 Out-of-frame Inter-chr p13 q34 68702 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PANK2-PAK7 PANK2 chr20 3870375 - PAK7 chr20 9624987 - Exonic hg19 COAD TCGA-DM-A1HA-01A 14 8 5'UTR-5'UTR Intra-chr p13 Seq+ 68703 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PANK4-RGS6 PANK4 chr1 2442777 - RGS6 chr14 72818803 + Exonic hg19 LUSC TCGA-94-8491-01A 4 2 In-Frame Inter-chr p36.32 q24.2 Seq+ 68704 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PANX1-CCDC67 PANX1 chr11 93862659 - CCDC67 chr11 93170709 + Exonic hg19 LUSC TCGA-34-5236-01A 61 26 Out-of-frame Intra-chr q21 Tumor suppressor gene Seq+ 68705 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PANX1-HEPHL1 PANX1 chr11 93862659 - HEPHL1 chr11 93844703 + Exonic hg19 HNSC TCGA-CQ-5332-01A 36 9 In-Frame Intra-chr q21 q21 Seq+ 68706 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PANX1-HEPHL1 PANX1 chr11 93862659 - HEPHL1 chr11 93826667 + Exonic hg19 HNSC TCGA-CV-7247-01A 11 4 Out-of-frame Intra-chr q21 q21 Seq+ 68707 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PANX1-KIAA1377 PANX1 chr11 93886796 - KIAA1377 chr11 101814996 + Exonic hg19 HNSC TCGA-CQ-6228-01A 89 54 Out-of-frame Intra-chr q21 Seq+ 68708 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAPD4-GPBP1 PAPD4 chr5 78908898 - GPBP1 chr5 56471275 + Exonic hg19 ACC TCGA-OR-A5J1-01A 4 1 5'UTR-5'UTR Intra-chr q14.1 q11.2 Transcription factor Seq+ 68709 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAPD5-SHANK2 PAPD5 chr16 50250106 - SHANK2 chr11 70858384 - Exonic hg19 BRCA TCGA-EW-A1J5-01A 436 217 CDS-5'UTR Inter-chr q12.1 q13.4 Seq+ 68710 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAPD7-MTRR PAPD7 chr5 6714812 - MTRR chr5 7889208 + Exonic hg19 MESO TCGA-TS-A7P1-01A 2 2 5'UTR-CDS Intra-chr p15.31 p15.31 Oncogene Seq+ 68711 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAPD7-RAF1 PAPD7 chr5 6751310 - RAF1 chr3 12641307 - Exonic hg19 PRAD TCGA-HC-8256-01A 23 18 In-Frame Inter-chr p15.31 p25.2 TKL:RAF Oncogene Seq+ 68712 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAPD7-SRD5A1 PAPD7 chr5 6743953 - SRD5A1 chr5 6662929 + Exonic hg19 BRCA TCGA-B6-A3ZX-01A 11 12 CDS-3'UTR Intra-chr p15.31 p15.31 Seq+ 68713 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAPD7-SRD5A1 PAPD7 chr5 6714812 - SRD5A1 chr5 6662929 + Exonic hg19 ESCA TCGA-R6-A8W8-01B 2 28 5'UTR-3'UTR Intra-chr p15.31 p15.31 Seq+ 68714 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAPOLA-AK7 PAPOLA chr14 97022750 - AK7 chr14 96904172 + Exonic hg19 LUAD TCGA-55-8094-01A 21 19 In-Frame Intra-chr q32.2 q32.2 Seq+ 68715 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAPOLA-C14orf129 PAPOLA chr14 96968937 - C14orf129 chr14 96846025 + Exonic hg19 UCEC TCGA-AX-A2H4-01A 13 27 Out-of-frame Intra-chr q32.2 68716 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAPOLA-GALNT5 PAPOLA chr14 96968937 - GALNT5 chr2 158140794 + Exonic hg19 BRCA TCGA-PE-A5DC-01A 7 14 In-Frame Inter-chr q32.2 q24.1 Seq+ 68717 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAPOLA-NPAS3 PAPOLA chr14 96968937 - NPAS3 chr14 34145417 + Exonic hg19 CESC TCGA-EK-A2R7-01A 4 4 Out-of-frame Intra-chr q32.2 q13.1 Transcription factor Seq+ 68718 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAPOLG-ABCA12 PAPOLG chr2 60997646 - ABCA12 chr2 215821502 - Exonic hg19 PRAD TCGA-EJ-7784-01A 2 1 In-Frame Intra-chr p16.1 q35 68719 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAPPA2-ACBD6 PAPPA2 chr1 176740316 - ACBD6 chr1 180257652 - Exonic hg19 LIHC TCGA-2Y-A9HA-01A 48 21 Out-of-frame Intra-chr q25.2 q25.3 Seq+ 68720 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAPPA2-ASTN1 PAPPA2 chr1 176640251 - ASTN1 chr1 176863966 - Exonic hg19 LIHC TCGA-BC-A217-01A 14 4 In-Frame Intra-chr q25.2 q25.2 Seq+ 68721 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAPSS2-ATAD1 PAPSS2 chr10 89475600 - ATAD1 chr10 89574369 - Exonic hg19 LGG TCGA-HT-7873-01B 21 9 CDS-5'UTR Intra-chr q23.2 Seq+ 68722 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAPSS2-BID PAPSS2 chr10 89469070 - BID chr22 18222254 - Exonic hg19 LUSC TCGA-77-A5GH-01A 11 11 In-Frame Inter-chr q23.2 q11.21 Seq+ 68723 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAPSS2-MINPP1 PAPSS2 chr10 89419765 - MINPP1 chr10 89311839 + Exonic hg19 BRCA TCGA-AO-A0JL-01A 2 1 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 68724 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAPSS2-MINPP1 PAPSS2 chr10 89487246 - MINPP1 chr10 89311839 + Exonic hg19 ACC TCGA-PK-A5HB-01A 247 116 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 68725 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAPSS2-SFRP5 PAPSS2 chr10 89504988 - SFRP5 chr10 99529502 - Exonic hg19 READ TCGA-AG-3731-01A 4 3 Out-of-frame Intra-chr q23.2 q24.2 Tumor suppressor gene Seq+ 68726 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARD3-ADAMTS17 PARD3 chr10 34985246 - ADAMTS17 chr15 100537794 - Exonic hg19 PRAD TCGA-J4-A83I-01A 7 11 Out-of-frame Inter-chr p11.21 q26.3 68727 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARD3-ARMC3 PARD3 chr10 34558585 - ARMC3 chr10 23220925 + Exonic hg19 BRCA TCGA-BH-A1EW-01A 4 1 CDS-5'UTR Intra-chr p11.21 p12.2 68728 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARD3-ARMC4 PARD3 chr10 35103804 - ARMC4 chr10 28196706 - Exonic hg19 HNSC TCGA-CR-7377-01A 22 11 Out-of-frame Intra-chr p11.21 p12.1 Seq+ 68729 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARD3-COLQ PARD3 chr10 34759013 - COLQ chr3 15520889 - Exonic hg19 STAD TCGA-BR-8365-01A 2 6 In-Frame Inter-chr p11.21 p25.1 Seq+ 68730 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARD3-CUL2 PARD3 chr10 34985246 - CUL2 chr10 35360267 - Exonic hg19 BLCA TCGA-4Z-AA87-01A 7 1 Out-of-frame Intra-chr p11.21 p11.21 Tumor suppressor gene Seq+ 68731 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARD3-CUL2 PARD3 chr10 34985246 - CUL2 chr10 35305322 - Exonic hg19 BRCA TCGA-OL-A66P-01A 3 3 Out-of-frame Intra-chr p11.21 p11.21 Tumor suppressor gene Seq+ 68732 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARD3-FAM188A PARD3 chr10 35103804 - FAM188A chr10 15838171 - Exonic hg19 LGG TCGA-DU-A6S7-01A 2 1 In-Frame Intra-chr p11.21 Tumor suppressor gene 68733 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARD3-FAM83B PARD3 chr10 35103804 - FAM83B chr6 54734985 + Exonic hg19 SKCM TCGA-EE-A2MS-06A 7 2 CDS-5'UTR Inter-chr p11.21 p12.1 Seq+ 68734 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARD3-IL2RA PARD3 chr10 34805907 - IL2RA chr10 6067988 - Exonic hg19 UCEC TCGA-AJ-A3TW-01A 11 18 In-Frame Intra-chr p11.21 p15.1 Seq+ 68735 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARD3-LYAR PARD3 chr10 35103804 - LYAR chr4 4276496 - Exonic hg19 LGG TCGA-DH-A669-01A 174 85 In-Frame Inter-chr p11.21 p16.3 Seq+ 68736 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARD3-LYAR PARD3 chr10 35103804 - LYAR chr4 4276496 - Exonic hg19 LGG TCGA-DH-A669-02A 68 42 In-Frame Inter-chr p11.21 p16.3 Seq+ 68737 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARD3-NRXN1 PARD3 chr10 34985246 - NRXN1 chr2 50318632 - Exonic hg19 ESCA TCGA-IG-A8O2-01A 8 46 In-Frame Inter-chr p11.21 p16.3 Seq+ 68738 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARD3-NSUN6 PARD3 chr10 34558585 - NSUN6 chr10 18905222 - Exonic hg19 LUSC TCGA-77-7140-01A 16 19 In-Frame Intra-chr p11.21 p12.31 Seq+ 68739 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARD3-ZNF521 PARD3 chr10 34805907 - ZNF521 chr18 22672045 - Exonic hg19 OV TCGA-24-1426-01A 3 17 In-Frame Inter-chr p11.21 q11.2 Oncogene Transcription factor Seq+ 68740 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARD3B-MAP2 PARD3B chr2 205410842 - MAP2 chr2 210372316 + Exonic hg19 PRAD TCGA-HC-8258-01A 4 3 CDS-5'UTR Intra-chr q33.3 q34 68741 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARD3B-PTH2R PARD3B chr2 205551005 - PTH2R chr2 209357989 + Exonic hg19 STAD TCGA-CD-8533-01A 2 2 In-Frame Intra-chr q33.3 q34 68742 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARD3B-SLC40A1 PARD3B chr2 205410842 - SLC40A1 chr2 190448146 - Exonic hg19 UVM TCGA-V4-A9EK-01A 3 1 Out-of-frame Intra-chr q33.3 q32.2 Seq+ 68743 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARD3B-SLC50A1 PARD3B chr2 205410842 - SLC50A1 chr1 155110455 + Exonic hg19 STAD TCGA-BR-7716-01A 2 20 In-Frame Inter-chr q33.3 q22 Seq+ 68744 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARD3B-TACC1 PARD3B chr2 205551005 - TACC1 chr8 38677040 + Exonic hg19 PRAD TCGA-CH-5794-01A 3 2 Out-of-frame Inter-chr q33.3 p11.22 68745 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARD3B-VWC2L PARD3B chr2 205830046 - VWC2L chr2 215440396 + Exonic hg19 LUSC TCGA-70-6722-01A 4 3 In-Frame Intra-chr q33.3 q34 Seq+ 68746 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARD3B-WWOX PARD3B chr2 205990461 - WWOX chr16 79245505 + Exonic hg19 LUAD TCGA-49-6744-01A 5 13 In-Frame Inter-chr q33.3 q23.1 Tumor suppressor gene Seq+ 68747 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARD6B-CD48 PARD6B chr20 49354616 - CD48 chr1 160654979 - Exonic hg19 BRCA TCGA-A2-A0T7-01A 2 1 In-Frame Inter-chr q13.13 q23.3 68748 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARD6B-PTPN1 PARD6B chr20 49348389 - PTPN1 chr20 49177900 + Exonic hg19 OV TCGA-VG-A8LO-01A 2 16 In-Frame Intra-chr q13.13 q13.13 Tumor suppressor gene Seq+ 68749 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARD6G-CHST1 PARD6G chr18 77960593 - CHST1 chr11 45674156 - Exonic hg19 HNSC TCGA-DQ-7591-01A 17 6 CDS-5'UTR Inter-chr q23 p11.2 Seq+ 68750 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARD6G-RFTN2 PARD6G chr18 78005160 - RFTN2 chr2 198437004 - Exonic hg19 HNSC TCGA-HD-7753-01A 83 35 In-Frame Inter-chr q23 q33.1 Seq+ 68751 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARK2-SMOX PARK2 chr6 161969886 - SMOX chr20 4155677 + Exonic hg19 MESO TCGA-SC-A6LM-01A 3 4 CDS-5'UTR Inter-chr Tumor suppressor gene p13 Seq+ 68752 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARK2-STRADA PARK2 chr6 161969886 - STRADA chr17 61781942 - Exonic hg19 LGG TCGA-DU-5854-01A 10 3 In-Frame Inter-chr Tumor suppressor gene q23.3 Tumor suppressor gene Seq+ 68753 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARL-ABCC5 PARL chr3 183602510 - ABCC5 chr3 183732235 - Exonic hg19 HNSC TCGA-BA-A6DL-01A 10 8 CDS-5'UTR Intra-chr q27.1 q27.1 Seq+ 68754 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARL-ABCC5 PARL chr3 183602510 - ABCC5 chr3 183655848 - Exonic hg19 BLCA TCGA-DK-A3IT-01A 5 3 Out-of-frame Intra-chr q27.1 q27.1 Seq+ 68755 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARN-ABCA3 PARN chr16 14576495 - ABCA3 chr16 2379855 - Exonic hg19 BRCA TCGA-B6-A0RI-01A 2 3 CDS-3'UTR Intra-chr p13.3 68756 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARN-PLA2G10 PARN chr16 14645878 - PLA2G10 chr16 14766606 - Exonic hg19 LGG TCGA-S9-A6TS-01A 4 2 In-Frame Intra-chr Seq+ 68757 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARN-RRN3 PARN chr16 14711447 - RRN3 chr16 15178562 - Exonic hg19 BRCA TCGA-A7-A13D-01A 5 15 In-Frame Intra-chr p13.11 Seq+ 68758 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARN-SMG1 PARN chr16 14645878 - SMG1 chr16 18849788 - Exonic hg19 BRCA TCGA-S3-AA0Z-01A 7 8 In-Frame Intra-chr p12.3 Atypical:PIKK 68759 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARP11-PIK3C2G PARP11 chr12 3973002 - PIK3C2G chr12 18793363 + Exonic hg19 SKCM TCGA-FS-A4F9-06A 9 3 Out-of-frame Intra-chr p13.32 p12.3 Seq+ 68760 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARP14-TASP1 PARP14 chr3 122420482 - TASP1 chr20 13514788 - Exonic hg19 LUAD TCGA-55-A493-01A 4 3 In-Frame Inter-chr q21.1 p12.1 Seq+ 68761 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARP4-COL9A1 PARP4 chr13 25073439 - COL9A1 chr6 70993523 - Exonic hg19 HNSC TCGA-UF-A7JJ-01A 10 6 In-Frame Inter-chr q12.12 q13 Seq+ 68762 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARP4-GDF1 PARP4 chr13 25008533 - GDF1 chr19 18980199 - Exonic hg19 THYM TCGA-4V-A9QJ-01A 2 1 Out-of-frame Inter-chr q12.12 p13.11 Seq+ 68763 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARP8-ANKRD55 PARP8 chr5 50125795 - ANKRD55 chr5 55412609 - Exonic hg19 ACC TCGA-OR-A5J1-01A 3 3 Out-of-frame Intra-chr q11.1 q11.2 68764 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARP8-CRYL1 PARP8 chr5 49963959 - CRYL1 chr13 20987526 - Exonic hg19 LUSC TCGA-56-7823-01B 39 33 Out-of-frame Inter-chr q11.1 q12.11 Seq+ 68765 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARP8-EIF5A2 PARP8 chr5 49963959 - EIF5A2 chr3 170624882 - Exonic hg19 PRAD TCGA-EJ-5501-01A 12 11 Out-of-frame Inter-chr q11.1 q26.2 Seq+ 68766 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARP8-ELL2 PARP8 chr5 49963959 - ELL2 chr5 95278753 - Exonic hg19 PRAD TCGA-VN-A943-01A 2 4 Out-of-frame Intra-chr q11.1 q15 Seq+ 68767 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARP8-FAM159B PARP8 chr5 50059076 - FAM159B chr5 63991334 + Exonic hg19 UCS TCGA-ND-A4W6-01A 4 5 In-Frame Intra-chr q11.1 q12.3 Seq+ 68768 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARVA-ESRRB PARVA chr11 12399330 - ESRRB chr14 76905684 + Exonic hg19 PRAD TCGA-VP-A875-01A 3 2 CDS-5'UTR Inter-chr p15.3 q24.3 Tumor suppressor gene Transcription factor 68769 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARVA-MICALCL PARVA chr11 12399330 - MICALCL chr11 12341243 + Exonic hg19 LUAD TCGA-55-A491-01A 8 5 In-Frame Intra-chr p15.3 p15.3 Seq+ 68770 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARVA-POLD3 PARVA chr11 12399330 - POLD3 chr11 74305106 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 2 5 Out-of-frame Intra-chr p15.3 q13.4 68771 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARVA-SPON1 PARVA chr11 12499496 - SPON1 chr11 14156966 + Exonic hg19 UCEC TCGA-EO-A3KU-01A 9 6 In-Frame Intra-chr p15.3 p15.2 Seq+ 68772 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARVA-USP47 PARVA chr11 12399330 - USP47 chr11 11970025 + Exonic hg19 SARC TCGA-3B-A9HI-01A 2 2 Out-of-frame Intra-chr p15.3 p15.3 Seq+ 68773 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARVB-ATP6V1D PARVB chr22 44420331 - ATP6V1D chr14 67819757 - Exonic hg19 LUSC TCGA-56-8629-01A 5 2 Out-of-frame Inter-chr q13.31 q23.3 Seq+ 68774 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PARVB-SAMM50 PARVB chr22 44420331 - SAMM50 chr22 44392218 + Exonic hg19 OV TCGA-13-0760-01A 12 9 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 68775 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PASD1-ZFX PASD1 chrX 150817174 - ZFX chrX 24225443 + Exonic hg19 ESCA TCGA-VR-AA7B-01A 3 19 Out-of-frame Intra-chr q28 p22.11 Transcription factor Seq+ 68776 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PASK-BOK PASK chr2 242079936 - BOK chr2 242509540 + Exonic hg19 LUAD TCGA-55-6985-01A 2 2 Out-of-frame Intra-chr q37.3 CAMK:CAMKL q37.3 Seq+ 68777 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PATL1-TECTA PATL1 chr11 59434326 - TECTA chr11 121058541 + Exonic hg19 GBM TCGA-26-5132-01A 23 101 Out-of-frame Intra-chr q12.1 q23.3 Seq+ 68778 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PATZ1-PKIB PATZ1 chr22 31738883 - PKIB chr6 122907066 + Exonic hg19 BRCA TCGA-LL-A6FR-01A 3 3 CDS-5'UTR Inter-chr q12.2 Transcription factor q22.31 Seq+ 68779 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAWR-CLEC2A PAWR chr12 80083509 - CLEC2A chr12 10069402 - Exonic hg19 BRCA TCGA-D8-A27W-01A 5 4 In-Frame Intra-chr q21.2 Tumor suppressor gene p13.31 Seq+ 68780 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAWR-MOSC1 PAWR chr12 80083509 - MOSC1 chr1 220969985 + Exonic hg19 SARC TCGA-DX-A7EI-01A 14 14 Out-of-frame Inter-chr q21.2 Tumor suppressor gene 68781 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAWR-PPP1R12A PAWR chr12 80083509 - PPP1R12A chr12 80266718 - Exonic hg19 ESCA TCGA-JY-A938-01A 5 38 In-Frame Intra-chr q21.2 Tumor suppressor gene q21.31 Seq+ 68782 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAWR-PTPRR PAWR chr12 80083509 - PTPRR chr12 71092129 - Exonic hg19 BRCA TCGA-B6-A408-01A 13 15 In-Frame Intra-chr q21.2 Tumor suppressor gene q15 Seq+ 68783 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAX5-TMEM9B PAX5 chr9 37033983 - TMEM9B chr11 8977845 - Exonic hg19 BRCA TCGA-E2-A15S-01A 3 2 Out-of-frame Inter-chr p13.2 Oncogene Tumor suppressor gene Transcription factor p15.4 68784 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAX8-GLIS1 PAX8 chr2 114035947 - GLIS1 chr1 54065951 - Exonic hg19 THCA TCGA-BJ-A291-01A 109 38 CDS-5'UTR Inter-chr q14.1 Oncogene Transcription factor p32.3 Transcription factor Seq+ 68785 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAX8-NFE2L2 PAX8 chr2 113999128 - NFE2L2 chr2 178097311 - Exonic hg19 THCA TCGA-EM-A2CP-01A 391 138 In-Frame Intra-chr q14.1 Oncogene Transcription factor q31.2 Oncogene Transcription factor KB Pub Seq+ 68786 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAX8-PPARG PAX8 chr2 113994178 - PPARG chr3 12421203 + Exonic hg19 THCA TCGA-BJ-A0YZ-01A 325 237 In-Frame Inter-chr q14.1 Oncogene Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 68787 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAX8-PPARG PAX8 chr2 113992971 - PPARG chr3 12421203 + Exonic hg19 THCA TCGA-BJ-A0ZF-01A 793 401 In-Frame Inter-chr q14.1 Oncogene Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 68788 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAX8-PPARG PAX8 chr2 113992971 - PPARG chr3 12421203 + Exonic hg19 THCA TCGA-DE-A4M9-01A 714 475 In-Frame Inter-chr q14.1 Oncogene Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 68789 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAX8-PPARG PAX8 chr2 113992971 - PPARG chr3 12421203 + Exonic hg19 THCA TCGA-EM-A3AJ-01A 575 386 In-Frame Inter-chr q14.1 Oncogene Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 68790 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAX8-PPARG PAX8 chr2 113992971 - PPARG chr3 12421203 + Exonic hg19 THCA TCGA-ET-A39N-01A 539 226 In-Frame Inter-chr q14.1 Oncogene Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 68791 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAXIP1-GIMAP2 PAXIP1 chr7 154774929 - GIMAP2 chr7 150384140 + Exonic hg19 PRAD TCGA-G9-6343-01A 3 3 CDS-5'UTR Intra-chr q36.2 q36.1 68792 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PAXIP1-NCAPG2 PAXIP1 chr7 154790360 - NCAPG2 chr7 158424409 - Exonic hg19 LUSC TCGA-94-8491-01A 23 10 Out-of-frame Intra-chr q36.2 q36.3 Seq+ 68793 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PBRM1-CACNA2D3 PBRM1 chr3 52637537 - CACNA2D3 chr3 54420742 + Exonic hg19 BRCA TCGA-E2-A1L7-01A 2 6 Out-of-frame Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 Tumor suppressor gene Seq+ 68794 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PBRM1-FBXW12 PBRM1 chr3 52595783 - FBXW12 chr3 48416844 + Exonic hg19 MESO TCGA-MQ-A4LM-01A 3 4 In-Frame Intra-chr p21.1 Oncogene Tumor suppressor gene p21.31 Seq+ 68795 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PBRM1-GLT8D1 PBRM1 chr3 52712516 - GLT8D1 chr3 52734512 - Exonic hg19 HNSC TCGA-QK-A6VC-01A 10 14 CDS-5'UTR Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 Seq+ 68796 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PBRM1-IGSF11 PBRM1 chr3 52712516 - IGSF11 chr3 118647563 - Exonic hg19 LUAD TCGA-99-8032-01A 7 3 Out-of-frame Intra-chr p21.1 Oncogene Tumor suppressor gene q13.32 Seq+ 68797 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PBRM1-KYNU PBRM1 chr3 52692215 - KYNU chr2 143742653 + Exonic hg19 LGG TCGA-HT-7477-01B 67 42 In-Frame Inter-chr p21.1 Oncogene Tumor suppressor gene q22.2 Seq+ 68798 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PBRM1-NEK4 PBRM1 chr3 52637537 - NEK4 chr3 52773650 - Exonic hg19 SKCM TCGA-EB-A5SE-01A 14 7 Out-of-frame Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 Other:NEK Seq+ 68799 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PBRM1-TKT PBRM1 chr3 52692215 - TKT chr3 53276258 - Exonic hg19 BRCA TCGA-A7-A26G-01A 5 7 Out-of-frame Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 Tumor suppressor gene Seq+ 68800 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PBRM1-TMEM110-MUSTN1 PBRM1 chr3 52584437 - TMEM110-MUSTN1 chr3 52889460 - Exonic hg19 LUAD TCGA-55-8085-01A 12 4 Out-of-frame Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 68801 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PBX1-COPG2 PBX1 chr1 164532548 - COPG2 chr7 130148500 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 605 400 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor q32.2 Seq+ 68802 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PBX1-CTNNA3 PBX1 chr1 164781386 - CTNNA3 chr10 68535282 - Exonic hg19 BRCA TCGA-B6-A0IQ-01A 33 29 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor q21.3 Tumor suppressor gene Seq+ 68803 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PBX1-DHX40 PBX1 chr1 164532548 - DHX40 chr17 57679883 + Exonic hg19 BRCA TCGA-E9-A22D-01A 10 6 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor q23.1 Seq+ 68804 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PBX1-DISC1 PBX1 chr1 164532548 - DISC1 chr1 232094574 + Exonic hg19 BRCA TCGA-A7-A13D-01B 4 8 In-Frame Intra-chr q23.3 Oncogene Transcription factor q42.2 Seq+ 68805 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PBX1-ILDR2 PBX1 chr1 164532548 - ILDR2 chr1 166927338 - Exonic hg19 BRCA TCGA-A2-A0YM-01A 15 8 In-Frame Intra-chr q23.3 Oncogene Transcription factor q24.1 Seq+ 68806 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PBX1-KIAA1045 PBX1 chr1 164532548 - KIAA1045 chr9 34971292 + Exonic hg19 SARC TCGA-DX-A1KY-01A 5 2 CDS-5'UTR Inter-chr q23.3 Oncogene Transcription factor 68807 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PBX1-LRRC52 PBX1 chr1 164532548 - LRRC52 chr1 165532742 + Exonic hg19 BRCA TCGA-GI-A2C8-01A 74 59 In-Frame Intra-chr q23.3 Oncogene Transcription factor q24.1 Seq+ 68808 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PBX1-RFWD2 PBX1 chr1 164532548 - RFWD2 chr1 175958615 - Exonic hg19 SARC TCGA-DX-A6YR-01A 9 2 In-Frame Intra-chr q23.3 Oncogene Transcription factor q25.2 Tumor suppressor gene Seq+ 68809 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PBX1-RHBG PBX1 chr1 164781386 - RHBG chr1 156354318 + Exonic hg19 BRCA TCGA-C8-A278-01A 26 20 In-Frame Intra-chr q23.3 Oncogene Transcription factor q22 Seq+ 68810 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PBX3-SH3GL2 PBX3 chr9 128510902 - SH3GL2 chr9 17747064 + Exonic hg19 MESO TCGA-LK-A4O5-01A 9 7 Out-of-frame Intra-chr q33.3 Transcription factor p22.2 Seq+ 68811 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PBXIP1-ACBD6 PBXIP1 chr1 154928545 - ACBD6 chr1 180283857 - Exonic hg19 BRCA TCGA-BH-A8FY-01A 3 14 5'UTR-CDS Intra-chr q21.3 q25.3 Seq+ 68812 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PBXIP1-GBAP1 PBXIP1 chr1 154926147 - GBAP1 chr1 155187840 - Exonic hg19 LIHC TCGA-UB-A7MC-01A 5 7 CDS-3'UTR Intra-chr q21.3 q22 Seq+ 68813 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PC-ACTN4 PC chr11 66631245 - ACTN4 chr19 39191240 + Exonic hg19 LIHC TCGA-BC-A10T-01A 114 57 In-Frame Inter-chr q13.2 Seq+ 68814 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PC-ACY3 PC chr11 66719901 - ACY3 chr11 67415060 - Exonic hg19 LGG TCGA-S9-A7QY-01A 2 1 5'UTR-5'UTR Intra-chr q13.2 q13.2 68815 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PC-CAT PC chr11 66631245 - CAT chr11 34470739 + Exonic hg19 LIHC TCGA-DD-A4NN-01A 32 27 In-Frame Intra-chr q13.2 p13 Tumor suppressor gene Seq+ 68816 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PC-CTTN PC chr11 66719901 - CTTN chr11 70251371 + Exonic hg19 SARC TCGA-K1-A6RV-01A 3 1 5'UTR-5'UTR Intra-chr q13.2 q13.3 68817 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PC-DCDC2 PC chr11 66631245 - DCDC2 chr6 24205330 - Exonic hg19 BRCA TCGA-A8-A081-01A 3 2 Out-of-frame Inter-chr q13.2 p22.3 Tumor suppressor gene Seq+ 68818 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PC-FOLR1 PC chr11 66719901 - FOLR1 chr11 71903210 + Exonic hg19 LGG TCGA-FG-A4MY-01A 2 1 5'UTR-5'UTR Intra-chr q13.2 q13.4 68819 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PC-KDM2A PC chr11 66719901 - KDM2A chr11 67012660 + Exonic hg19 LUSC TCGA-85-8584-01A 24 5 5'UTR-5'UTR Intra-chr q13.2 q13.2 Transcription factor Seq+ 68820 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PC-MS4A4E PC chr11 66719901 - MS4A4E chr11 59997544 - Exonic hg19 BRCA TCGA-3C-AAAU-01A 2 1 Out-of-frame Intra-chr q13.2 q12.2 68821 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PC-MX2 PC chr11 66719901 - MX2 chr21 42762492 + Exonic hg19 LIHC TCGA-ED-A7XO-01A 28 5 5'UTR-CDS Inter-chr q13.2 q22.3 Seq+ 68822 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PC-ORAOV1 PC chr11 66719901 - ORAOV1 chr11 69488089 - Exonic hg19 PRAD TCGA-KK-A5A1-01A 2 1 5'UTR-CDS Intra-chr q13.2 q13.3 68823 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PC-PPP6R3 PC chr11 66719901 - PPP6R3 chr11 68370810 + Exonic hg19 BRCA TCGA-S3-A6ZH-01A 94 42 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 68824 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PC-THRSP PC chr11 66719901 - THRSP chr11 77778705 + Exonic hg19 BRCA TCGA-BH-A1EN-01A 8 7 5'UTR-3'UTR Intra-chr q13.2 q14.1 Seq+ 68825 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCBP1-UTRN PCBP1 chr2 70316332 - UTRN chr6 144665237 + Exonic hg19 KIRP TCGA-BQ-5878-01A 2 2 Out-of-frame Inter-chr p13.3 q24.2 68826 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCBP2-AMHR2 PCBP2 chr12 53862616 - AMHR2 chr12 53823930 + Exonic hg19 CESC TCGA-C5-A1MQ-01A 228 151 Out-of-frame Intra-chr q13.13 q13.13 Seq+ 68827 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCBP2-CCT5 PCBP2 chr12 53873616 - CCT5 chr5 10250033 + Exonic hg19 CESC TCGA-BI-A0VS-01A 2 10 Out-of-frame Inter-chr q13.13 p15.2 68828 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCBP2-HMGA2 PCBP2 chr12 53846160 - HMGA2 chr12 66221781 + Exonic hg19 SKCM TCGA-D3-A3C1-06A 17 35 5'UTR-CDS Intra-chr q13.13 q14.3 Transcription factor Seq+ 68829 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCBP2-ITGB7 PCBP2 chr12 53865591 - ITGB7 chr12 53585420 - Exonic hg19 BLCA TCGA-E7-A7PW-01A 29 506 Out-of-frame Intra-chr q13.13 q13.13 Seq+ 68830 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCBP2-MFN1 PCBP2 chr12 53873616 - MFN1 chr3 179096011 + Exonic hg19 BRCA TCGA-BH-A0HX-01A 2 1 Out-of-frame Inter-chr q13.13 q26.33 68831 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCBP2-YWHAE PCBP2 chr12 53873467 - YWHAE chr17 1303494 - Exonic hg19 BLCA TCGA-BT-A3PJ-01A 2 3 Out-of-frame Inter-chr q13.13 p13.3 68832 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCBP3-GRIK1 PCBP3 chr21 47063782 - GRIK1 chr21 30971257 - Exonic hg19 KIRP TCGA-B9-A5W9-01A 3 1 5'UTR-CDS Intra-chr q22.3 q21.3 Seq+ 68833 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCBP4-POC1A PCBP4 chr3 51995026 - POC1A chr3 52130728 - Exonic hg19 HNSC TCGA-TN-A7HJ-01A 2 2 In-Frame Intra-chr p21.2 p21.2 68834 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCCA-CLYBL PCCA chr13 100888132 - CLYBL chr13 100425078 + Exonic hg19 BRCA TCGA-E2-A1IE-01A 5 4 Out-of-frame Intra-chr q32.3 q32.3 Seq+ 68835 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCCA-CLYBL PCCA chr13 100764315 - CLYBL chr13 100425078 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 2 3 Out-of-frame Intra-chr q32.3 q32.3 Seq+ 68836 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCCA-CLYBL PCCA chr13 100921037 - CLYBL chr13 100543572 + Exonic hg19 BLCA TCGA-GC-A3RB-01A 12 10 Out-of-frame Intra-chr q32.3 q32.3 Seq+ 68837 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCCA-CLYBL PCCA chr13 100888132 - CLYBL chr13 100511115 + Exonic hg19 LIHC TCGA-PD-A5DF-01A 6 1 Out-of-frame Intra-chr q32.3 q32.3 Seq+ 68838 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCCA-DIAPH3 PCCA chr13 100861717 - DIAPH3 chr13 60616954 - Exonic hg19 KIRC TCGA-BP-4173-01A 5 3 In-Frame Intra-chr q32.3 q21.2 Seq+ 68839 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCCA-DNAJC3 PCCA chr13 100888132 - DNAJC3 chr13 96443127 + Exonic hg19 SARC TCGA-DX-AB2P-01A 7 3 In-Frame Intra-chr q32.3 q32.1 Seq+ 68840 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCCA-FARP1 PCCA chr13 100809594 - FARP1 chr13 98996016 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 7 3 In-Frame Intra-chr q32.3 q32.2 Seq+ 68841 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCCA-FSIP2 PCCA chr13 100809594 - FSIP2 chr2 186692883 + Exonic hg19 HNSC TCGA-CV-7261-01A 2 2 Out-of-frame Inter-chr q32.3 q32.1 Seq+ 68842 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCCA-MBNL2 PCCA chr13 100861717 - MBNL2 chr13 97986530 + Exonic hg19 OV TCGA-09-1673-01A 10 5 In-Frame Intra-chr q32.3 q32.1 Transcription factor Seq+ 68843 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCCA-MBNL2 PCCA chr13 100809594 - MBNL2 chr13 98043576 + Exonic hg19 LIHC TCGA-DD-AAD1-01A 3 4 In-Frame Intra-chr q32.3 q32.1 Transcription factor Seq+ 68844 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCCA-ZIC2 PCCA chr13 100861717 - ZIC2 chr13 100637200 + Exonic hg19 LIHC TCGA-BC-A112-01A 2 2 Out-of-frame Intra-chr q32.3 q32.3 Transcription factor Seq+ 68845 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCCA-ZIC2 PCCA chr13 100755214 - ZIC2 chr13 100637200 + Exonic hg19 LIHC TCGA-PD-A5DF-01A 27 10 Out-of-frame Intra-chr q32.3 q32.3 Transcription factor Seq+ 68846 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCCB-DLG1 PCCB chr3 136048826 - DLG1 chr3 196921460 - Exonic hg19 BRCA TCGA-A8-A08P-01A 14 15 Out-of-frame Intra-chr q22.3 q29 Tumor suppressor gene Seq+ 68847 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCDH15-DUSP13 PCDH15 chr10 56077031 - DUSP13 chr10 76863855 - Exonic hg19 BRCA TCGA-E9-A229-01A 19 14 CDS-5'UTR Intra-chr q21.1 q22.2 Seq+ 68848 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCDH7-AC021860.1 PCDH7 chr4 30726218 - AC021860.1 chr4 38629723 - Exonic hg19 LUAD TCGA-86-8054-01A 4 5 Out-of-frame Intra-chr p15.1 p14 68849 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCDHA11-ANKHD1 PCDHA11 chr5 140251079 - ANKHD1 chr5 139892948 + Exonic hg19 BRCA TCGA-D8-A13Z-01A 11 9 In-Frame Intra-chr q31.3 q31.3 Seq+ 68850 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCDHGA6-JMJD1C PCDHGA6 chr5 140756074 - JMJD1C chr10 65024524 - Exonic hg19 SKCM TCGA-EE-A20I-06A 2 2 In-Frame Inter-chr q31.3 q21.3 68851 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCDHGB4-TYK2 PCDHGB4 chr5 140892546 - TYK2 chr19 10491352 - Exonic hg19 LGG TCGA-DU-A6S6-01A 2 1 Out-of-frame Inter-chr q31.3 p13.2 TK:JakA 68852 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCDHGC3-QKI PCDHGC3 chr5 140858113 - QKI chr6 163956014 + Exonic hg19 GBM TCGA-06-0129-01A 21 79 In-Frame Inter-chr q31.3 Tumor suppressor gene q26 Seq+ 68853 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCF11-DOCK2 PCF11 chr11 82888861 - DOCK2 chr5 169410072 + Exonic hg19 PRAD TCGA-V1-A9OT-01A 2 1 Out-of-frame Inter-chr q14.1 q35.1 68854 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCF11-KDM2A PCF11 chr11 82868673 - KDM2A chr11 66974981 + Exonic hg19 BRCA TCGA-BH-A201-01A 98 62 Out-of-frame Intra-chr q14.1 q13.2 Transcription factor Seq+ 68855 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCF11-SPON1 PCF11 chr11 82868673 - SPON1 chr11 14264878 + Exonic hg19 BRCA TCGA-AR-A24H-01A 79 47 In-Frame Intra-chr q14.1 p15.2 Seq+ 68856 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCGF3-FANCI PCGF3 chr4 738476 - FANCI chr15 89856135 + Exonic hg19 LUSC TCGA-43-6770-01A 184 239 In-Frame Inter-chr p16.3 q26.1 Seq+ 68857 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCGF3-HTT PCGF3 chr4 738476 - HTT chr4 3136128 + Exonic hg19 STAD TCGA-BR-8484-01A 8 15 In-Frame Intra-chr p16.3 p16.3 Seq+ 68858 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCGF3-MYL5 PCGF3 chr4 738476 - MYL5 chr4 674298 + Exonic hg19 BLCA TCGA-DK-A6B2-01A 108 79 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 68859 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCGF3-NPTXR PCGF3 chr4 724899 - NPTXR chr22 39224517 - Exonic hg19 LGG TCGA-TQ-A7RM-01A 72 22 5'UTR-CDS Inter-chr p16.3 q13.1 Seq+ 68860 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCGF3-PDE6B PCGF3 chr4 699759 - PDE6B chr4 647641 + Exonic hg19 CESC TCGA-DS-A1OC-01A 10 5 5'UTR-5'UTR Intra-chr p16.3 p16.3 Seq+ 68861 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCGF3-PIGG PCGF3 chr4 724899 - PIGG chr4 532942 + Exonic hg19 BRCA TCGA-BH-A0HX-01A 8 5 5'UTR-CDS Intra-chr p16.3 p16.3 Seq+ 68862 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCGF3-SPATA24 PCGF3 chr4 699759 - SPATA24 chr5 138738382 - Exonic hg19 BLCA TCGA-XF-A8HG-01A 4 5 5'UTR-CDS Inter-chr p16.3 q31.2 Seq+ 68863 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCGF5-RNLS PCGF5 chr10 93024277 - RNLS chr10 90332818 - Exonic hg19 SKCM TCGA-EE-A2MP-06A 3 1 Out-of-frame Intra-chr q23.32 q23.31 Seq+ 68864 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCID2-ATP4B PCID2 chr13 113862913 - ATP4B chr13 114309257 - Exonic hg19 LUSC TCGA-56-A4ZK-01A 540 995 Out-of-frame Intra-chr q34 q34 Seq+ 68865 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCID2-SNRPA PCID2 chr13 113862913 - SNRPA chr19 41265336 + Exonic hg19 LGG TCGA-E1-A7Z2-01A 41 72 In-Frame Inter-chr q34 q13.2 Seq+ 68866 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCLO-PHTF2 PCLO chr7 82763566 - PHTF2 chr7 77530028 + Exonic hg19 TGCT TCGA-WZ-A7V3-01A 2 8 In-Frame Intra-chr q21.11 q11.23 Seq+ 68867 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCM1-NRG1 PCM1 chr8 17782289 - NRG1 chr8 32611890 + Exonic hg19 KIRC TCGA-B8-5553-01A 11 5 5'UTR-CDS Intra-chr p22 p12 Seq+ 68868 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCM1-PEBP4 PCM1 chr8 17780697 - PEBP4 chr8 22785233 - Exonic hg19 CESC TCGA-VS-A8QC-01A 3 1 5'UTR-5'UTR Intra-chr p22 p21.3 68869 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCMTD1-KIAA1875 PCMTD1 chr8 52811490 - KIAA1875 chr8 145170846 + Exonic hg19 LUAD TCGA-86-A4D0-01A 20 9 5'UTR-5'UTR Intra-chr q11.23 Seq+ 68870 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCMTD1-KLHDC8A PCMTD1 chr8 52811490 - KLHDC8A chr1 205312921 - Exonic hg19 OV TCGA-29-2427-01A 2 6 5'UTR-5'UTR Inter-chr q11.23 q32.1 Seq+ 68871 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCMTD1-MRPL15 PCMTD1 chr8 52811490 - MRPL15 chr8 55049071 + Exonic hg19 PAAD TCGA-HZ-A77P-01A 3 8 5'UTR-CDS Intra-chr q11.23 q11.23 Seq+ 68872 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCMTD1-RB1CC1 PCMTD1 chr8 52773405 - RB1CC1 chr8 53599527 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 5 3 CDS-5'UTR Intra-chr q11.23 q11.23 Tumor suppressor gene 68873 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCMTD1-RHOT1 PCMTD1 chr8 52773405 - RHOT1 chr17 30509776 + Exonic hg19 BLCA TCGA-DK-A1AC-01A 57 38 Out-of-frame Inter-chr q11.23 q11.2 Seq+ 68874 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCMTD1-SLCO5A1 PCMTD1 chr8 52758221 - SLCO5A1 chr8 70674110 - Exonic hg19 SKCM TCGA-EE-A2MH-06A 4 3 Out-of-frame Intra-chr q11.23 q13.3 Seq+ 68875 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCMTD1-ST18 PCMTD1 chr8 52811490 - ST18 chr8 53159224 - Exonic hg19 BRCA TCGA-A2-A4S3-01A 6 5 5'UTR-5'UTR Intra-chr q11.23 q11.23 Transcription factor Seq+ 68876 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCMTD1-ST18 PCMTD1 chr8 52811490 - ST18 chr8 53079546 - Exonic hg19 BRCA TCGA-AO-A128-01A 9 3 5'UTR-CDS Intra-chr q11.23 q11.23 Transcription factor Seq+ 68877 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCMTD1-ST18 PCMTD1 chr8 52811490 - ST18 chr8 53085143 - Exonic hg19 UCEC TCGA-BK-A0CC-01A 3 3 5'UTR-CDS Intra-chr q11.23 q11.23 Transcription factor Seq+ 68878 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCMTD1-ST18 PCMTD1 chr8 52773405 - ST18 chr8 53062537 - Exonic hg19 BRCA TCGA-C8-A12K-01A 13 11 Out-of-frame Intra-chr q11.23 q11.23 Transcription factor Seq+ 68879 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCMTD1-ST18 PCMTD1 chr8 52811490 - ST18 chr8 53159224 - Exonic hg19 PRAD TCGA-VP-A878-01A 5 4 5'UTR-5'UTR Intra-chr q11.23 q11.23 Transcription factor Seq+ 68880 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCMTD1-ST18 PCMTD1 chr8 52758221 - ST18 chr8 53142637 - Exonic hg19 PRAD TCGA-YJ-A8SW-01A 15 12 CDS-5'UTR Intra-chr q11.23 q11.23 Transcription factor Seq+ 68881 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCMTD1-WRN PCMTD1 chr8 52811490 - WRN chr8 30998946 + Exonic hg19 BRCA TCGA-A8-A07P-01A 29 25 5'UTR-CDS Intra-chr q11.23 p12 Oncogene Seq+ 68882 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCMTD2-CHD6 PCMTD2 chr20 62899363 - CHD6 chr20 40179999 - Exonic hg19 BRCA TCGA-E2-A106-01A 22 11 CDS-5'UTR Intra-chr q12 Seq+ 68883 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCMTD2-DNAJC5 PCMTD2 chr20 62899363 - DNAJC5 chr20 62559688 + Exonic hg19 BRCA TCGA-A8-A07O-01A 4 4 CDS-5'UTR Intra-chr q13.33 Seq+ 68884 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCMTD2-MACROD2 PCMTD2 chr20 62891625 - MACROD2 chr20 15210586 + Exonic hg19 PRAD TCGA-HC-7080-01A 8 7 In-Frame Intra-chr p12.1 Seq+ 68885 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCMTD2-MYT1 PCMTD2 chr20 62891625 - MYT1 chr20 62850264 + Exonic hg19 SKCM TCGA-XV-AAZV-01A 9 2 In-Frame Intra-chr Other:WEE Transcription factor Seq+ 68886 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCMTD2-SNX6 PCMTD2 chr20 62896782 - SNX6 chr14 35078948 - Exonic hg19 BRCA TCGA-AO-A12D-01A 27 17 In-Frame Inter-chr q13.1 Seq+ 68887 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCNP-ATR PCNP chr3 101298848 - ATR chr3 142185375 - Exonic hg19 PRAD TCGA-YL-A9WK-01A 36 59 CDS-3'UTR Intra-chr q12.3 q23 Atypical:PIKK Oncogene Tumor suppressor gene Seq+ 68888 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCNT-MCOLN1 PCNT chr21 47811291 - MCOLN1 chr19 7598409 + Exonic hg19 BRCA TCGA-B6-A402-01A 11 20 Out-of-frame Inter-chr q22.3 p13.2 Seq+ 68889 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCNT-NSMCE2 PCNT chr21 47771454 - NSMCE2 chr8 126163413 + Exonic hg19 SARC TCGA-JV-A75J-01A 7 4 In-Frame Inter-chr q22.3 q24.13 Seq+ 68890 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCNT-POC1A PCNT chr21 47811291 - POC1A chr3 52110001 - Exonic hg19 HNSC TCGA-CV-6961-01A 3 1 Out-of-frame Inter-chr q22.3 p21.2 Seq+ 68891 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCNX-RAD51B PCNX chr14 71374720 - RAD51B chr14 68758601 + Exonic hg19 LUAD TCGA-55-8506-01A 208 49 In-Frame Intra-chr q24.1 Seq+ 68892 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCNX-TTLL5 PCNX chr14 71570386 - TTLL5 chr14 76420767 + Exonic hg19 HNSC TCGA-BA-A6D8-01A 9 7 Out-of-frame Intra-chr q24.3 Seq+ 68893 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCNXL2-CDCA7 PCNXL2 chr1 233372591 - CDCA7 chr2 174227954 + Exonic hg19 PRAD TCGA-G9-6364-01A 2 1 In-Frame Inter-chr q31.1 68894 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCNXL2-COG2 PCNXL2 chr1 233296029 - COG2 chr1 230819320 + Exonic hg19 BRCA TCGA-EW-A1OV-01A 5 2 Out-of-frame Intra-chr q42.2 Seq+ 68895 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCNXL2-PTPN14 PCNXL2 chr1 233270759 - PTPN14 chr1 214638300 - Exonic hg19 BRCA TCGA-AR-A24Z-01A 16 8 CDS-5'UTR Intra-chr q41 Seq+ 68896 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCNXL2-TAOK3 PCNXL2 chr1 233270759 - TAOK3 chr12 118639268 - Exonic hg19 BRCA TCGA-AR-A1AH-01A 13 6 In-Frame Inter-chr q24.23 Seq+ 68897 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCNXL3-AP000769.1 PCNXL3 chr11 65393525 - AP000769.1 chr11 65233556 + Exonic hg19 BLCA TCGA-FD-A62P-01A 4 1 Out-of-frame Intra-chr q13.1 68898 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCNXL3-C11orf80 PCNXL3 chr11 65398075 - C11orf80 chr11 66610320 + Exonic hg19 LGG TCGA-HT-7686-01A 27 8 Out-of-frame Intra-chr q13.2 Seq+ 68899 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCNXL3-ERBB3 PCNXL3 chr11 65404910 - ERBB3 chr12 56492035 + Exonic hg19 HNSC TCGA-DQ-7595-01A 2 4 Out-of-frame Inter-chr q13.2 Oncogene 68900 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCP4L1-NDUFS2 PCP4L1 chr1 161228773 - NDUFS2 chr1 161183170 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 30 29 In-Frame Intra-chr q23.3 q23.3 Seq+ 68901 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCSK5-COL18A1 PCSK5 chr9 78547399 - COL18A1 chr21 46888156 + Exonic hg19 PCPG TCGA-RW-A8AZ-01A 2 1 Out-of-frame Inter-chr q21.13 q22.3 68902 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCSK5-DDX58 PCSK5 chr9 78682959 - DDX58 chr9 32500937 - Exonic hg19 STAD TCGA-RD-A7BT-01A 2 23 In-Frame Intra-chr q21.13 p21.1 Tumor suppressor gene Seq+ 68903 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCSK5-DENND1A PCSK5 chr9 78641953 - DENND1A chr9 126641300 - Exonic hg19 SARC TCGA-3B-A9HS-01A 32 16 In-Frame Intra-chr q21.13 q33.3 Seq+ 68904 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCSK5-OSTF1 PCSK5 chr9 78506289 - OSTF1 chr9 77761599 + Exonic hg19 LUAD TCGA-MP-A4TK-01A 17 12 Out-of-frame Intra-chr q21.13 q21.13 Seq+ 68905 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCTP-CALCOCO2 PCTP chr17 53828605 - CALCOCO2 chr17 46937676 + Exonic hg19 BRCA TCGA-AN-A04C-01A 18 17 In-Frame Intra-chr q22 q21.32 Seq+ 68906 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCYT1A-EPHA6 PCYT1A chr3 196014403 - EPHA6 chr3 97123994 + Exonic hg19 PRAD TCGA-KK-A59X-01A 3 1 5'UTR-CDS Intra-chr q29 q11.2 Seq+ 68907 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCYT1A-TCTEX1D2 PCYT1A chr3 196014486 - TCTEX1D2 chr3 196022940 - Exonic hg19 BLCA TCGA-4Z-AA7Q-01A 18 34 5'UTR-CDS Intra-chr q29 q29 Seq+ 68908 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCYT1A-TCTEX1D2 PCYT1A chr3 196014486 - TCTEX1D2 chr3 196022940 - Exonic hg19 LGG TCGA-E1-A7YV-01A 12 12 5'UTR-CDS Intra-chr q29 q29 Seq+ 68909 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PCYT1B-SIAH1 PCYT1B chrX 24593247 - SIAH1 chr16 48396341 - Exonic hg19 LGG TCGA-E1-5304-01A 19 11 Out-of-frame Inter-chr p22.11 q12.1 Tumor suppressor gene Seq+ 68910 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDCD11-FBXL15 PDCD11 chr10 105166547 - FBXL15 chr10 104180809 + Exonic hg19 SARC TCGA-K1-A6RV-01A 26 20 Out-of-frame Intra-chr q24.33 q24.32 Seq+ 68911 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDCD2L-CACNA1A PDCD2L chr19 34904752 - CACNA1A chr19 13482593 - Exonic hg19 STAD TCGA-MX-A666-01A 2 31 In-Frame Intra-chr q13.11 p13.13 Seq+ 68912 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDCD2L-KIAA0355 PDCD2L chr19 34895895 - KIAA0355 chr19 34843552 + Exonic hg19 LUSC TCGA-63-A5MH-01A 7 1 In-Frame Intra-chr q13.11 Seq+ 68913 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDCD6-FRS2 PDCD6 chr5 272887 - FRS2 chr12 69965056 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 52 43 In-Frame Inter-chr p15.33 q15 Seq+ 68914 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDCD6-SDHA PDCD6 chr5 272887 - SDHA chr5 240473 + Exonic hg19 LUSC TCGA-77-A5GH-01A 2 7 In-Frame Intra-chr p15.33 p15.33 Oncogene Tumor suppressor gene 68915 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDCD6-TERT PDCD6 chr5 272887 - TERT chr5 1282739 - Exonic hg19 KIRC TCGA-BP-4991-01A 14 13 In-Frame Intra-chr p15.33 p15.33 Oncogene Seq+ 68916 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDCD6-TERT PDCD6 chr5 271936 - TERT chr5 1294781 - Exonic hg19 KICH TCGA-KN-8435-01A 3 3 Out-of-frame Intra-chr p15.33 p15.33 Oncogene Seq+ 68917 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDCD7-TAF15 PDCD7 chr15 65421370 - TAF15 chr17 34144720 + Exonic hg19 BRCA TCGA-LD-A7W5-01A 9 8 In-Frame Inter-chr q22.31 q12 Seq+ 68918 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDCL-NCS1 PDCL chr9 125590750 - NCS1 chr9 132980111 + Exonic hg19 TGCT TCGA-S6-A8JY-01A 3 3 5'UTR-CDS Intra-chr q33.2 q34.11 Seq+ 68919 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDDC1-ALOX5AP PDDC1 chr11 770993 - ALOX5AP chr13 31326189 + Exonic hg19 SKCM TCGA-FS-A1Z4-06A 65 16 In-Frame Inter-chr q12.3 Seq+ 68920 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE10A-DDX23 PDE10A chr6 166075435 - DDX23 chr12 49239565 - Exonic hg19 SARC TCGA-DX-AB2F-01A 2 1 CDS-5'UTR Inter-chr q27 q13.12 Seq+ 68921 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE10A-POLB PDE10A chr6 166075435 - POLB chr8 42229081 + Exonic hg19 BRCA TCGA-D8-A13Z-01A 125 105 In-Frame Inter-chr q27 p11.21 Seq+ 68922 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE10A-PSMB1 PDE10A chr6 165956928 - PSMB1 chr6 170846428 - Exonic hg19 BRCA TCGA-E2-A1LE-01A 35 30 In-Frame Intra-chr q27 Seq+ 68923 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE10A-ZNF695 PDE10A chr6 166075435 - ZNF695 chr1 247109129 - Exonic hg19 GBM TCGA-14-1402-02A 2 4 Out-of-frame Inter-chr q27 q44 Transcription factor Seq+ 68924 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE12-KCNJ4 PDE12 chr3 57545115 - KCNJ4 chr22 38824176 - Exonic hg19 UCEC TCGA-AX-A3G1-01A 4 1 CDS-5'UTR Inter-chr p14.3 q13.1 Seq+ 68925 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE12-ROBO2 PDE12 chr3 57545115 - ROBO2 chr3 77671378 + Exonic hg19 SKCM TCGA-GF-A4EO-06A 3 3 Out-of-frame Intra-chr p14.3 p12.3 Seq+ 68926 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE1A-PPP1R1C PDE1A chr2 183291305 - PPP1R1C chr2 182926169 + Exonic hg19 KIRC TCGA-BP-5006-01A 20 8 Out-of-frame Intra-chr q32.1 q31.3 Seq+ 68927 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE3A-CCT2 PDE3A chr12 20523178 - CCT2 chr12 69985839 + Exonic hg19 LUAD TCGA-67-3774-01A 2 5 Out-of-frame Intra-chr p12.2 q15 Seq+ 68928 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE3A-MUCL1 PDE3A chr12 20523178 - MUCL1 chr12 55248900 + Exonic hg19 SARC TCGA-QQ-A5V9-01A 5 1 Out-of-frame Intra-chr p12.2 q13.2 68929 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE3B-MICAL2 PDE3B chr11 14666599 - MICAL2 chr11 12183626 + Exonic hg19 BLCA TCGA-FD-A6TD-01A 5 1 CDS-5'UTR Intra-chr p15.2 p15.3 Seq+ 68930 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE3B-PLCXD3 PDE3B chr11 14889304 - PLCXD3 chr5 41313872 - Exonic hg19 SKCM TCGA-GN-A8LN-01A 9 9 Out-of-frame Inter-chr p15.2 p13.1 Seq+ 68931 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE3B-ZNF212 PDE3B chr11 14856641 - ZNF212 chr7 148947772 + Exonic hg19 SKCM TCGA-WE-A8ZM-06A 57 19 Out-of-frame Inter-chr p15.2 q36.1 Transcription factor Seq+ 68932 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4A-S1PR5 PDE4A chr19 10574651 - S1PR5 chr19 10625705 - Exonic hg19 LUSC TCGA-22-4613-01A 2 2 CDS-5'UTR Intra-chr p13.2 p13.2 68933 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4B-JAK1 PDE4B chr1 66798303 - JAK1 chr1 65352024 - Exonic hg19 BRCA TCGA-A8-A0A1-01A 3 1 CDS-5'UTR Intra-chr p31.3 p31.3 TK:JakA Oncogene Seq+ 68934 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4B-MOBKL2C PDE4B chr1 66731770 - MOBKL2C chr1 47079043 - Exonic hg19 BRCA TCGA-AR-A24Z-01A 4 3 Out-of-frame Intra-chr p31.3 68935 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4C-KIAA1683 PDE4C chr19 18343760 - KIAA1683 chr19 18368916 - Exonic hg19 COAD TCGA-D5-6541-01A 30 29 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 68936 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-C4orf14 PDE4D chr5 58476421 - C4orf14 chr4 57840188 - Exonic hg19 SARC TCGA-KD-A5QU-01A 6 4 Out-of-frame Inter-chr q12.1 68937 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-CRABP1 PDE4D chr5 58334686 - CRABP1 chr15 78640269 + Exonic hg19 LUAD TCGA-86-7713-01A 250 330 In-Frame Inter-chr q12.1 q25.1 Seq+ 68938 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-DEPDC1B PDE4D chr5 59783769 - DEPDC1B chr5 59943360 - Exonic hg19 LUSC TCGA-39-5029-01A 33 15 5'UTR-CDS Intra-chr q12.1 q12.1 Seq+ 68939 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-DEPDC1B PDE4D chr5 59783769 - DEPDC1B chr5 59983054 - Exonic hg19 LUAD TCGA-44-7660-01A 2 1 5'UTR-CDS Intra-chr q12.1 q12.1 Seq+ 68940 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-DEPDC1B PDE4D chr5 59783769 - DEPDC1B chr5 59943360 - Exonic hg19 LUSC TCGA-77-8143-01A 31 22 5'UTR-CDS Intra-chr q12.1 q12.1 Seq+ 68941 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-DEPDC1B PDE4D chr5 59481384 - DEPDC1B chr5 59983054 - Exonic hg19 PRAD TCGA-CH-5750-01A 10 15 In-Frame Intra-chr q12.1 q12.1 Seq+ 68942 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-DEPDC1B PDE4D chr5 59481384 - DEPDC1B chr5 59943360 - Exonic hg19 PRAD TCGA-EJ-5521-01A 13 6 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 68943 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-DEPDC1B PDE4D chr5 59481384 - DEPDC1B chr5 59983054 - Exonic hg19 PRAD TCGA-KK-A8IM-01A 3 1 In-Frame Intra-chr q12.1 q12.1 Seq+ 68944 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-DEPDC1B PDE4D chr5 59783769 - DEPDC1B chr5 59983054 - Exonic hg19 BRCA TCGA-OL-A5D7-01A 6 1 5'UTR-CDS Intra-chr q12.1 q12.1 Seq+ 68945 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-DEPDC1B PDE4D chr5 59783769 - DEPDC1B chr5 59895087 - Exonic hg19 PRAD TCGA-VN-A88O-01A 15 18 5'UTR-CDS Intra-chr q12.1 q12.1 Seq+ 68946 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-EFNA5 PDE4D chr5 58476421 - EFNA5 chr5 106763210 - Exonic hg19 SKCM TCGA-EE-A2M7-06A 8 1 Out-of-frame Intra-chr q12.1 q21.3 Tumor suppressor gene 68947 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-ELOVL7 PDE4D chr5 59481384 - ELOVL7 chr5 60050660 - Exonic hg19 LUAD TCGA-44-7660-01A 3 10 In-Frame Intra-chr q12.1 q12.1 Seq+ 68948 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-ELOVL7 PDE4D chr5 59284315 - ELOVL7 chr5 60095057 - Exonic hg19 PRAD TCGA-EJ-7785-01A 6 1 CDS-5'UTR Intra-chr q12.1 q12.1 Seq+ 68949 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-ELOVL7 PDE4D chr5 59481384 - ELOVL7 chr5 60083258 - Exonic hg19 PRAD TCGA-G9-6342-01A 7 2 CDS-5'UTR Intra-chr q12.1 q12.1 Seq+ 68950 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-ELOVL7 PDE4D chr5 59783769 - ELOVL7 chr5 60083258 - Exonic hg19 PRAD TCGA-KC-A7FA-01A 2 2 5'UTR-5'UTR Intra-chr q12.1 q12.1 Seq+ 68951 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-ELOVL7 PDE4D chr5 59783769 - ELOVL7 chr5 60095057 - Exonic hg19 PRAD TCGA-V1-A9Z9-01A 3 4 5'UTR-5'UTR Intra-chr q12.1 q12.1 Seq+ 68952 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-ERCC8 PDE4D chr5 59783769 - ERCC8 chr5 60198335 - Exonic hg19 BRCA TCGA-HN-A2NL-01A 2 4 5'UTR-CDS Intra-chr q12.1 q12.1 Seq+ 68953 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-ERCC8 PDE4D chr5 58511603 - ERCC8 chr5 60170510 - Exonic hg19 STAD TCGA-VQ-A92D-01A 2 10 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 68954 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-ERCC8 PDE4D chr5 59481384 - ERCC8 chr5 60200700 - Exonic hg19 PRAD TCGA-ZG-A8QY-01A 2 1 In-Frame Intra-chr q12.1 q12.1 Seq+ 68955 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-FGF14 PDE4D chr5 59783769 - FGF14 chr13 102379160 - Exonic hg19 PRAD TCGA-EJ-5497-01A 11 7 5'UTR-CDS Inter-chr q12.1 q33.1 Seq+ 68956 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-FYB PDE4D chr5 59481384 - FYB chr5 39124380 - Exonic hg19 KIRP TCGA-P4-A5EB-01A 13 1 Out-of-frame Intra-chr q12.1 p13.1 68957 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-INTS10 PDE4D chr5 59284315 - INTS10 chr8 19677084 + Exonic hg19 PRAD TCGA-J4-A83K-01A 8 4 In-Frame Inter-chr q12.1 p21.3 68958 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-KHDRBS3 PDE4D chr5 58476421 - KHDRBS3 chr8 136533480 + Exonic hg19 LUSC TCGA-63-A5MY-01A 57 44 In-Frame Inter-chr q12.1 q24.23 Seq+ 68959 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-MCTP1 PDE4D chr5 59064073 - MCTP1 chr5 94353188 - Exonic hg19 LUSC TCGA-22-0940-01A 7 2 Out-of-frame Intra-chr q12.1 q15 Seq+ 68960 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-PPAP2A PDE4D chr5 58476421 - PPAP2A chr5 54737736 - Exonic hg19 PRAD TCGA-HC-7821-01A 17 7 Out-of-frame Intra-chr q12.1 Seq+ 68961 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-RAB24 PDE4D chr5 58882155 - RAB24 chr5 176730321 - Exonic hg19 PRAD TCGA-TK-A8OK-01A 2 1 CDS-5'UTR Intra-chr q12.1 q35.3 68962 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-RAB3C PDE4D chr5 59064073 - RAB3C chr5 58120865 + Exonic hg19 LUSC TCGA-77-7142-01A 36 14 In-Frame Intra-chr q12.1 q11.2 Seq+ 68963 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-RFWD2 PDE4D chr5 59064073 - RFWD2 chr1 175916375 - Exonic hg19 LUAD TCGA-L9-A5IP-01A 2 4 Out-of-frame Inter-chr q12.1 q25.2 Tumor suppressor gene Seq+ 68964 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-RGS7BP PDE4D chr5 59783769 - RGS7BP chr5 63871601 + Exonic hg19 LUSC TCGA-66-2778-01A 2 1 5'UTR-CDS Intra-chr q12.1 q12.3 68965 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-RNF180 PDE4D chr5 59064073 - RNF180 chr5 63665442 + Exonic hg19 KIRP TCGA-P4-A5EB-01A 10 4 Out-of-frame Intra-chr q12.1 q12.3 Tumor suppressor gene Seq+ 68966 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4D-RP11-325I22.2 PDE4D chr5 59481384 - RP11-325I22.2 chr5 1364806 - Exonic hg19 LUAD TCGA-73-4666-01A 10 20 Out-of-frame Intra-chr q12.1 68967 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE4DIP-C1orf186 PDE4DIP chr1 144915445 - C1orf186 chr1 206239579 - Exonic hg19 BRCA TCGA-BH-A203-01A 25 15 In-Frame Intra-chr q21.2 Oncogene q32.1 Seq+ 68968 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE7A-COPS5 PDE7A chr8 66636490 - COPS5 chr8 67958195 - Exonic hg19 BRCA TCGA-A2-A04U-01A 4 9 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 68969 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE7A-KIAA1217 PDE7A chr8 66753606 - KIAA1217 chr10 24721924 + Exonic hg19 BRCA TCGA-A2-A04P-01A 5 1 Out-of-frame Inter-chr q13.1 p12.2 68970 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE7A-NCAM2 PDE7A chr8 66750709 - NCAM2 chr21 22582860 + Exonic hg19 LUAD TCGA-95-A4VN-01A 6 1 Out-of-frame Inter-chr q13.1 q21.1 Tumor suppressor gene 68971 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE7A-NKAIN3 PDE7A chr8 66753606 - NKAIN3 chr8 63492098 + Exonic hg19 BRCA TCGA-AN-A0XV-01A 19 5 In-Frame Intra-chr q13.1 q12.3 Seq+ 68972 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE7A-NRG1 PDE7A chr8 66691955 - NRG1 chr8 32585467 + Exonic hg19 HNSC TCGA-CQ-5334-01A 11 7 In-Frame Intra-chr q13.1 p12 Seq+ 68973 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE7A-PREX2 PDE7A chr8 66647029 - PREX2 chr8 68950394 + Exonic hg19 BRCA TCGA-D8-A1XZ-01A 16 13 In-Frame Intra-chr q13.1 q13.2 Seq+ 68974 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE7A-TRIM55 PDE7A chr8 66753606 - TRIM55 chr8 67061880 + Exonic hg19 BRCA TCGA-A2-A04P-01A 51 38 In-Frame Intra-chr q13.1 q13.1 Seq+ 68975 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE7A-YPEL2 PDE7A chr8 66691955 - YPEL2 chr17 57430576 + Exonic hg19 BRCA TCGA-E2-A14R-01A 2 1 CDS-5'UTR Inter-chr q13.1 q22 68976 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE7B-KIF21A PDE7B chr6 136472393 - KIF21A chr12 39726546 - Exonic hg19 SARC TCGA-3B-A9HL-01A 4 2 Out-of-frame Inter-chr q23.3 q12 Seq+ 68977 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE8A-ATF5 PDE8A chr15 85525579 - ATF5 chr19 50432500 + Exonic hg19 SARC TCGA-DX-A1L0-01A 2 2 5'UTR-5'UTR Inter-chr q25.3 q13.33 Transcription factor Seq+ 68978 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE8A-BNC1 PDE8A chr15 85643429 - BNC1 chr15 83926878 - Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 21 22 Out-of-frame Intra-chr q25.3 q25.2 Transcription factor Seq+ 68979 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE8A-SLCO3A1 PDE8A chr15 85525579 - SLCO3A1 chr15 92638111 + Exonic hg19 SKCM TCGA-DA-A1HW-06A 19 23 Out-of-frame Intra-chr q25.3 q26.1 Seq+ 68980 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE9A-ABCG1 PDE9A chr21 44073993 - ABCG1 chr21 43645781 + Exonic hg19 LUAD TCGA-50-5941-01A 16 7 In-Frame Intra-chr q22.3 q22.3 Seq+ 68981 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE9A-DHRS7 PDE9A chr21 44153536 - DHRS7 chr14 60622870 - Exonic hg19 LGG TCGA-HT-7603-01A 8 7 In-Frame Inter-chr q22.3 q23.1 Seq+ 68982 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE9A-SLC37A1 PDE9A chr21 44174174 - SLC37A1 chr21 43922406 + Exonic hg19 PRAD TCGA-KK-A8ID-01A 3 4 CDS-5'UTR Intra-chr q22.3 q22.3 Seq+ 68983 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDE9A-TMPRSS2 PDE9A chr21 44153536 - TMPRSS2 chr21 42870116 - Exonic hg19 PRAD TCGA-ZG-A9L2-01A 17 23 In-Frame Intra-chr q22.3 q22.3 Seq+ 68984 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDGFA-GET4 PDGFA chr7 558576 - GET4 chr7 925693 + Exonic hg19 SARC TCGA-DX-A8BG-01A 17 2 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 68985 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDGFA-NT5C3 PDGFA chr7 550446 - NT5C3 chr7 33063720 - Exonic hg19 BRCA TCGA-A2-A0YE-01A 95 113 In-Frame Intra-chr p22.3 Seq+ 68986 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDGFA-OCA2 PDGFA chr7 557031 - OCA2 chr15 28277309 - Exonic hg19 SKCM TCGA-ER-A197-06A 18 18 Out-of-frame Inter-chr p22.3 q13.1 Seq+ 68987 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDGFB-DGCR2 PDGFB chr22 39626089 - DGCR2 chr22 19077003 - Exonic hg19 LGG TCGA-TM-A84J-01A 363 227 In-Frame Intra-chr q13.1 Oncogene q11.21 Seq+ 68988 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDGFC-G3BP2 PDGFC chr4 157891938 - G3BP2 chr4 76587233 - Exonic hg19 LUAD TCGA-86-A4D0-01A 2 1 CDS-5'UTR Intra-chr q32.1 q21.1 68989 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDGFRA-USP8 PDGFRA chr4 55156721 - USP8 chr15 50751197 + Exonic hg19 SARC TCGA-Z4-AAPG-01A 51 11 In-Frame Inter-chr q12 Oncogene q21.2 Seq+ 68990 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDGFRB-FAR1 PDGFRB chr5 149493405 - FAR1 chr11 13744912 + Exonic hg19 LUAD TCGA-78-7149-01A 2 8 Out-of-frame Inter-chr q32 Oncogene p15.3 68991 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDGFRL-VPS37A PDGFRL chr8 17447274 - VPS37A chr8 17132242 + Exonic hg19 LUAD TCGA-91-A4BC-01A 23 6 In-Frame Intra-chr p22 Tumor suppressor gene p22 Seq+ 68992 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDHB-C3orf67 PDHB chr3 58415435 - C3orf67 chr3 58739590 - Exonic hg19 LIHC TCGA-DD-A73A-01A 44 16 Out-of-frame Intra-chr p14.3 p14.2 Seq+ 68993 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDHB-CACNA2D3 PDHB chr3 58419358 - CACNA2D3 chr3 54354469 + Exonic hg19 LGG TCGA-DU-A7TA-01A 8 1 In-Frame Intra-chr p14.3 p21.1 Tumor suppressor gene 68994 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDHX-CAT PDHX chr11 34982065 - CAT chr11 34492505 + Exonic hg19 BRCA TCGA-AN-A0AL-01A 3 3 Out-of-frame Intra-chr p13 p13 Tumor suppressor gene Seq+ 68995 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDHX-CAT PDHX chr11 34938362 - CAT chr11 34470739 + Exonic hg19 STAD TCGA-BR-4357-01A 6 8 Out-of-frame Intra-chr p13 p13 Tumor suppressor gene Seq+ 68996 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDHX-CAT PDHX chr11 34999729 - CAT chr11 34477558 + Exonic hg19 BRCA TCGA-E9-A1RB-01A 39 20 In-Frame Intra-chr p13 p13 Tumor suppressor gene Seq+ 68997 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDHX-EHF PDHX chr11 34969153 - EHF chr11 34664175 + Exonic hg19 READ TCGA-AG-3731-01A 19 10 In-Frame Intra-chr p13 p13 Tumor suppressor gene Transcription factor Seq+ 68998 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDHX-EIF3M PDHX chr11 34979130 - EIF3M chr11 32622235 + Exonic hg19 BRCA TCGA-C8-A12V-01A 11 9 Out-of-frame Intra-chr p13 p13 Seq+ 68999 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDHX-KDM6A PDHX chr11 34938362 - KDM6A chrX 44966655 + Exonic hg19 BRCA TCGA-BH-A0BF-01A 19 12 Out-of-frame Inter-chr p13 p11.3 Oncogene Tumor suppressor gene Seq+ 69000 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDHX-STK32B PDHX chr11 34953031 - STK32B chr4 5418572 + Exonic hg19 CESC TCGA-JW-A5VJ-01A 15 8 In-Frame Inter-chr p13 p16.2 Seq+ 69001 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDIA4-CBX5 PDIA4 chr7 148700154 - CBX5 chr12 54673955 - Exonic hg19 PRAD TCGA-CH-5746-01A 2 4 3'UTR-5'UTR Inter-chr q36.1 q13.13 Tumor suppressor gene 69002 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDIA4-FAR1 PDIA4 chr7 148700154 - FAR1 chr11 13744912 + Exonic hg19 CESC TCGA-C5-A1ML-01A 2 1 3'UTR-CDS Inter-chr q36.1 p15.3 69003 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDIA4-HACE1 PDIA4 chr7 148725413 - HACE1 chr6 105232360 - Exonic hg19 PRAD TCGA-KK-A6E6-01A 15 12 Out-of-frame Inter-chr q36.1 q16.3 Tumor suppressor gene Seq+ 69004 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDIA4-RP11-150O12.1 PDIA4 chr7 148705251 - RP11-150O12.1 chr8 37279087 - Exonic hg19 LIHC TCGA-ZP-A9D0-01A 6 3 Out-of-frame Inter-chr q36.1 69005 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDIA4-SIAE PDIA4 chr7 148700154 - SIAE chr11 124543777 - Exonic hg19 THCA TCGA-EL-A3ZR-01A 2 8 3'UTR-5'UTR Inter-chr q36.1 q24.2 69006 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDIA5-DIRC2 PDIA5 chr3 122821643 - DIRC2 chr3 122575154 + Exonic hg19 OV TCGA-25-1322-01A 16 11 In-Frame Intra-chr q21.1 q21.1 Seq+ 69007 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDIA5-DIRC2 PDIA5 chr3 122843190 - DIRC2 chr3 122598110 + Exonic hg19 LUSC TCGA-77-7142-01A 87 48 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 69008 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDIA6-DKK3 PDIA6 chr2 10952804 - DKK3 chr11 11990034 - Exonic hg19 HNSC TCGA-QK-A8ZB-01A 22 31 Out-of-frame Inter-chr p25.1 p15.3 Tumor suppressor gene Seq+ 69009 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDK2-CDK12 PDK2 chr17 48182806 - CDK12 chr17 37627132 + Exonic hg19 BRCA TCGA-AR-A250-01A 24 24 In-Frame Intra-chr q21.33 q12 Oncogene Seq+ 69010 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDK3-CADPS PDK3 chrX 24517017 - CADPS chr3 62648069 - Exonic hg19 PRAD TCGA-EJ-7327-01A 2 1 Out-of-frame Inter-chr p22.11 p14.2 Seq+ 69011 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDK3-NAV3 PDK3 chrX 24523415 - NAV3 chr12 78579381 + Exonic hg19 SKCM TCGA-EB-A4OY-01A 10 3 In-Frame Inter-chr p22.11 q21.2 Seq+ 69012 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDLIM1-SORBS1 PDLIM1 chr10 97031390 - SORBS1 chr10 97081778 - Exonic hg19 LUAD TCGA-69-7978-01A 29 34 Out-of-frame Intra-chr q23.33 q24.1 Seq+ 69013 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDLIM1-SORBS1 PDLIM1 chr10 97006972 - SORBS1 chr10 97144042 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 7 9 In-Frame Intra-chr q23.33 q24.1 Seq+ 69014 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDLIM3-SORBS2 PDLIM3 chr4 186456496 - SORBS2 chr4 186508842 - Exonic hg19 BRCA TCGA-E2-A14N-01A 2 4 Out-of-frame Intra-chr q35.1 q35.1 Seq+ 69015 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDLIM3-ZFYVE28 PDLIM3 chr4 186456496 - ZFYVE28 chr4 2355800 - Exonic hg19 LGG TCGA-DH-A669-01A 18 6 In-Frame Intra-chr q35.1 p16.3 Seq+ 69016 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDLIM5-ART3 PDLIM5 chr4 95376535 - ART3 chr4 76997034 + Exonic hg19 BRCA TCGA-LL-A7T0-01A 7 4 5'UTR-5'UTR Intra-chr q22.3 q21.1 Seq+ 69017 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDLIM5-C4orf37 PDLIM5 chr4 95561601 - C4orf37 chr4 98108984 - Exonic hg19 SARC TCGA-DX-A8BU-01A 2 2 Out-of-frame Intra-chr q22.3 69018 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDLIM5-FAM190A PDLIM5 chr4 95376535 - FAM190A chr4 92519723 + Exonic hg19 UCS TCGA-NA-A4R0-01A 7 1 In-Frame Intra-chr q22.3 69019 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDLIM5-SHISA5 PDLIM5 chr4 95539342 - SHISA5 chr3 48538726 - Exonic hg19 BRCA TCGA-LL-A7T0-01A 13 8 In-Frame Inter-chr q22.3 p21.31 Seq+ 69020 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDLIM5-SMARCAD1 PDLIM5 chr4 95497185 - SMARCAD1 chr4 95210624 + Exonic hg19 LIHC TCGA-QA-A7B7-01A 39 52 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 69021 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDLIM7-FAM193B PDLIM7 chr5 176918808 - FAM193B chr5 176966148 - Exonic hg19 BLCA TCGA-E7-A5KE-01A 3 1 Out-of-frame Intra-chr q35.3 q35.3 Seq+ 69022 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDP1-INA PDP1 chr8 94929307 - INA chr10 105046792 + Exonic hg19 SARC TCGA-HB-A3YV-01A 6 4 5'UTR-CDS Inter-chr q22.1 q24.33 Seq+ 69023 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDPK1-CCNF PDPK1 chr16 2588137 - CCNF chr16 2495459 + Exonic hg19 BRCA TCGA-AR-A0TP-01A 8 1 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 69024 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDPK1-FAM100A PDPK1 chr16 2588137 - FAM100A chr16 4660556 - Exonic hg19 CESC TCGA-FU-A3TQ-01A 4 13 In-Frame Intra-chr p13.3 69025 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDRG1-C20orf112 PDRG1 chr20 30536611 - C20orf112 chr20 31099259 - Exonic hg19 UCS TCGA-N6-A4VE-01A 64 25 In-Frame Intra-chr q11.21 Seq+ 69026 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDS5A-RBM47 PDS5A chr4 39978060 - RBM47 chr4 40468716 - Exonic hg19 BRCA TCGA-C8-A130-01A 7 1 CDS-5'UTR Intra-chr p14 p14 69027 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDS5B-ATP8A2 PDS5B chr13 33160730 - ATP8A2 chr13 26402256 + Exonic hg19 SKCM TCGA-ER-A42L-06A 4 3 5'UTR-CDS Intra-chr q13.1 Tumor suppressor gene q12.13 Seq+ 69028 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDS5B-CD3EAP PDS5B chr13 33160730 - CD3EAP chr19 45910352 + Exonic hg19 LUAD TCGA-50-6591-01A 6 1 5'UTR-CDS Inter-chr q13.1 Tumor suppressor gene q13.32 Seq+ 69029 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDS5B-COL4A1 PDS5B chr13 33160730 - COL4A1 chr13 110895081 - Exonic hg19 SARC TCGA-QC-AA9N-01A 29 60 5'UTR-CDS Intra-chr q13.1 Tumor suppressor gene q34 Seq+ 69030 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDS5B-CRYBB1 PDS5B chr13 33160730 - CRYBB1 chr22 27012302 - Exonic hg19 PRAD TCGA-KK-A8IJ-01A 56 86 5'UTR-5'UTR Inter-chr q13.1 Tumor suppressor gene q12.1 Seq+ 69031 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDS5B-TBC1D4 PDS5B chr13 33160730 - TBC1D4 chr13 75936743 - Exonic hg19 PRAD TCGA-HC-7077-01A 2 1 5'UTR-CDS Intra-chr q13.1 Tumor suppressor gene q22.2 69032 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDS5B-UBR2 PDS5B chr13 33160730 - UBR2 chr6 42658770 + Exonic hg19 BRCA TCGA-BH-A209-01A 27 123 5'UTR-CDS Inter-chr q13.1 Tumor suppressor gene p21.1 Seq+ 69033 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDSS2-C18orf34 PDSS2 chr6 107655402 - C18orf34 chr18 30518055 - Exonic hg19 PAAD TCGA-IB-7652-01A 20 13 Out-of-frame Inter-chr q21 Tumor suppressor gene 69034 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDSS2-SMARCA4 PDSS2 chr6 107780194 - SMARCA4 chr19 11094797 + Exonic hg19 BRCA TCGA-BH-A1FE-01A 44 4 CDS-5'UTR Inter-chr q21 Tumor suppressor gene p13.2 Oncogene Tumor suppressor gene Seq+ 69035 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDXDC1-BFAR PDXDC1 chr16 15123913 - BFAR chr16 14755749 + Exonic hg19 LGG TCGA-DB-A64Q-01A 4 2 Out-of-frame Intra-chr p13.11 Seq+ 69036 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDXDC1-GPR56 PDXDC1 chr16 15092262 - GPR56 chr16 57684165 + Exonic hg19 LIHC TCGA-2Y-A9H0-01A 8 22 CDS-5'UTR Intra-chr p13.11 q21 Seq+ 69037 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDXDC1-LMF1 PDXDC1 chr16 15102704 - LMF1 chr16 943072 - Exonic hg19 BRCA TCGA-AN-A046-01A 6 14 In-Frame Intra-chr p13.11 p13.3 Seq+ 69038 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDXDC1-MMP14 PDXDC1 chr16 15131543 - MMP14 chr14 23305829 + Exonic hg19 PRAD TCGA-EJ-7327-01A 2 8 Out-of-frame Inter-chr p13.11 q11.2 69039 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDXDC1-NAV2 PDXDC1 chr16 15069077 - NAV2 chr11 19854030 + Exonic hg19 LUSC TCGA-85-8582-01A 4 4 In-Frame Inter-chr p13.11 p15.1 Seq+ 69040 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDXDC1-RAB11FIP4 PDXDC1 chr16 15123913 - RAB11FIP4 chr17 29761052 + Exonic hg19 LIHC TCGA-2Y-A9H0-01A 5 6 In-Frame Inter-chr p13.11 q11.2 Seq+ 69041 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDXDC1-RP11-82O18.1 PDXDC1 chr16 15122823 - RP11-82O18.1 chr16 15457926 - Exonic hg19 BRCA TCGA-A1-A0SO-01A 5 7 Out-of-frame Intra-chr p13.11 69042 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDXK-LCA5L PDXK chr21 45168961 - LCA5L chr21 40801137 - Exonic hg19 LUAD TCGA-05-4397-01A 10 17 CDS-5'UTR Intra-chr q22.3 q22.2 Seq+ 69043 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDXK-LIN7A PDXK chr21 45163688 - LIN7A chr12 81283148 - Exonic hg19 SARC TCGA-3B-A9HO-01A 7 6 In-Frame Inter-chr q22.3 q21.31 69044 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDXP-SLC17A9 PDXP chr22 38055363 - SLC17A9 chr20 61588117 + Exonic hg19 BLCA TCGA-GV-A40G-01A 5 2 Out-of-frame Inter-chr q13.1 q13.33 Seq+ 69045 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDZD2-COL27A1 PDZD2 chr5 32093130 - COL27A1 chr9 117014873 + Exonic hg19 LUAD TCGA-97-A4M1-01A 5 4 In-Frame Inter-chr p13.3 q32 Seq+ 69046 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDZD4-MTCP1NB PDZD4 chrX 153095694 - MTCP1NB chrX 154292308 - Exonic hg19 SARC TCGA-DX-A8BK-01A 15 13 CDS-5'UTR Intra-chr q28 69047 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDZD8-ENO4 PDZD8 chr10 119078383 - ENO4 chr10 118615134 + Exonic hg19 SKCM TCGA-DA-A1I8-06A 45 55 In-Frame Intra-chr q26.11 q25.3 Seq+ 69048 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDZRN3-ADAM19 PDZRN3 chr3 73651505 - ADAM19 chr5 156997988 - Exonic hg19 KIRC TCGA-B8-A7U6-01A 2 3 Out-of-frame Inter-chr p13 q33.3 Seq+ 69049 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDZRN3-CACNA2D3 PDZRN3 chr3 73651505 - CACNA2D3 chr3 54420742 + Exonic hg19 SARC TCGA-LI-A9QH-01A 5 5 In-Frame Intra-chr p13 p21.1 Tumor suppressor gene 69050 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDZRN3-EIF4E3 PDZRN3 chr3 73651505 - EIF4E3 chr3 71777774 - Exonic hg19 PRAD TCGA-VP-A87K-01A 3 3 CDS-5'UTR Intra-chr p13 p13 Seq+ 69051 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDZRN3-FCAMR PDZRN3 chr3 73651505 - FCAMR chr1 207143565 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 4 3 CDS-5'UTR Inter-chr p13 q32.1 Seq+ 69052 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDZRN3-THRB PDZRN3 chr3 73651505 - THRB chr3 24378862 - Exonic hg19 PRAD TCGA-KK-A7B1-01A 4 5 CDS-5'UTR Intra-chr p13 p24.2 Tumor suppressor gene Transcription factor Seq+ 69053 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDZRN3-TMC1 PDZRN3 chr3 73651505 - TMC1 chr9 75403255 + Exonic hg19 LGG TCGA-HT-7476-01A 6 1 Out-of-frame Inter-chr p13 q21.13 69054 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PDZRN4-CPM PDZRN4 chr12 41949562 - CPM chr12 69326620 - Exonic hg19 GBM TCGA-26-5132-01A 4 8 CDS-5'UTR Intra-chr q12 q15 Seq+ 69055 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PEA15-SIAE PEA15 chr1 160185166 - SIAE chr11 124543777 - Exonic hg19 LGG TCGA-R8-A6MK-01A 2 1 3'UTR-5'UTR Inter-chr q23.2 Tumor suppressor gene q24.2 69056 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PEBP4-UNC5D PEBP4 chr8 22582356 - UNC5D chr8 35406810 + Exonic hg19 BRCA TCGA-A2-A1FV-01A 2 4 In-Frame Intra-chr p21.3 p12 Tumor suppressor gene Seq+ 69057 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PELI1-ACTG2 PELI1 chr2 64331835 - ACTG2 chr2 74128403 + Exonic hg19 BRCA TCGA-A8-A079-01A 2 4 CDS-5'UTR Intra-chr p14 p13.1 Seq+ 69058 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PELI1-APLF PELI1 chr2 64371215 - APLF chr2 68794473 + Exonic hg19 BRCA TCGA-BH-A1F6-01A 2 4 5'UTR-CDS Intra-chr p14 p13.3 Seq+ 69059 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PELI1-KRT8 PELI1 chr2 64335374 - KRT8 chr12 53293849 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 59 72 Out-of-frame Inter-chr p14 q13.13 Seq+ 69060 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PELI2-FBXO33 PELI2 chr14 56585455 - FBXO33 chr14 39871715 - Exonic hg19 LUSC TCGA-43-8115-01A 2 1 In-Frame Intra-chr q22.3 q21.1 69061 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PELI2-FOXN3 PELI2 chr14 56585455 - FOXN3 chr14 89878834 - Exonic hg19 SARC TCGA-X9-A971-01A 5 4 CDS-5'UTR Intra-chr q22.3 q32.11 Transcription factor Seq+ 69062 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PELI2-GPHN PELI2 chr14 56645182 - GPHN chr14 67490350 + Exonic hg19 SKCM TCGA-W3-AA1R-06A 58 46 In-Frame Intra-chr q22.3 q23.3 Seq+ 69063 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PELI2-KTN1 PELI2 chr14 56585455 - KTN1 chr14 56122760 + Exonic hg19 UCEC TCGA-AX-A2H4-01A 13 18 In-Frame Intra-chr q22.3 q22.3 Seq+ 69064 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PEMT-B4GALNT2 PEMT chr17 17425594 - B4GALNT2 chr17 47218609 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 18 3 In-Frame Intra-chr p11.2 q21.32 Seq+ 69065 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PEMT-NEU3 PEMT chr17 17494845 - NEU3 chr11 74705554 + Exonic hg19 BRCA TCGA-AR-A0TZ-01A 11 3 Out-of-frame Inter-chr p11.2 q13.4 Seq+ 69066 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PEMT-RAI1 PEMT chr17 17480234 - RAI1 chr17 17627342 + Exonic hg19 HNSC TCGA-BA-6869-01A 21 6 CDS-5'UTR Intra-chr p11.2 p11.2 Seq+ 69067 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PEMT-SCUBE1 PEMT chr17 17480234 - SCUBE1 chr22 43654341 - Exonic hg19 SKCM TCGA-ER-A197-06A 6 5 Out-of-frame Inter-chr p11.2 q13.2 Seq+ 69068 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PEMT-TOP3A PEMT chr17 17480234 - TOP3A chr17 18183972 - Exonic hg19 PRAD TCGA-ZG-A9KY-01A 7 6 Out-of-frame Intra-chr p11.2 Seq+ 69069 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PENK-AC011333.1 PENK chr8 57353513 - AC011333.1 chr5 173473096 + Exonic hg19 PCPG TCGA-SQ-A6I4-01A 2 28 Out-of-frame Inter-chr q12.1 q35.2 69070 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PENK-PLAT PENK chr8 57353513 - PLAT chr8 42051245 - Exonic hg19 PCPG TCGA-WB-A819-01A 2 5 3'UTR-5'UTR Intra-chr q12.1 p11.21 69071 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PEPD-AC011497.1 PEPD chr19 33953901 - AC011497.1 chr19 43029770 + Exonic hg19 HNSC TCGA-CN-5369-01A 6 4 Out-of-frame Intra-chr q13.11 q13.2 69072 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PEPD-GRAMD1A PEPD chr19 33953901 - GRAMD1A chr19 35500023 + Exonic hg19 SKCM TCGA-D3-A3CC-06A 20 15 In-Frame Intra-chr q13.11 q13.11 Seq+ 69073 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PEPD-SKAP1 PEPD chr19 33953901 - SKAP1 chr17 46214699 - Exonic hg19 LUAD TCGA-69-A59K-01A 17 13 Out-of-frame Inter-chr q13.11 q21.32 Seq+ 69074 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PER1-ENOPH1 PER1 chr17 8045967 - ENOPH1 chr4 83369073 + Exonic hg19 PRAD TCGA-2A-A8W3-01A 22 4 Out-of-frame Inter-chr p13.1 Oncogene q21.22 Seq+ 69075 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PER2-HDAC4 PER2 chr2 239157703 - HDAC4 chr2 240037006 - Exonic hg19 SKCM TCGA-D3-A3MO-06A 2 1 In-Frame Intra-chr q37.3 Tumor suppressor gene q37.3 69076 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PER3-CELA2A PER3 chr1 7845646 - CELA2A chr1 15792494 + Exonic hg19 LGG TCGA-DU-8161-01A 5 7 In-Frame Intra-chr p36.23 p36.21 Seq+ 69077 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PER3-DNAJC11 PER3 chr1 7861251 - DNAJC11 chr1 6696306 - Exonic hg19 LUAD TCGA-97-7937-01A 25 6 Out-of-frame Intra-chr p36.23 p36.31 Tumor suppressor gene Seq+ 69078 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PER3-GNAL PER3 chr1 7858733 - GNAL chr18 11862394 + Exonic hg19 LUAD TCGA-44-3918-01A 2 1 Out-of-frame Inter-chr p36.23 p11.21 Seq+ 69079 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PER3-PGD PER3 chr1 7890221 - PGD chr1 10471475 + Exonic hg19 GBM TCGA-06-0879-01A 3 3 Out-of-frame Intra-chr p36.23 p36.22 69080 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PERP-CASK PERP chr6 138428264 - CASK chrX 41646536 - Exonic hg19 PRAD TCGA-ZG-A9L1-01A 5 10 In-Frame Inter-chr q23.3 p11.4 CAMK:CASK Seq+ 69081 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PERP-PLAT PERP chr6 138411926 - PLAT chr8 42051245 - Exonic hg19 CESC TCGA-EA-A3HQ-01A 2 56 Out-of-frame Inter-chr q23.3 p11.21 69082 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PERP-PLAT PERP chr6 138411926 - PLAT chr8 42051245 - Exonic hg19 CESC TCGA-HM-A4S6-01A 2 19 Out-of-frame Inter-chr q23.3 p11.21 69083 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PEX1-AKAP9 PEX1 chr7 92120586 - AKAP9 chr7 91682040 + Exonic hg19 LUSC TCGA-43-7658-01A 3 1 Out-of-frame Intra-chr q21.2 q21.2 Oncogene Seq+ 69084 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PEX1-CDK6 PEX1 chr7 92157621 - CDK6 chr7 92355107 - Exonic hg19 COAD TCGA-AA-3697-01A 18 4 In-Frame Intra-chr q21.2 q21.2 CMGC:CDK Oncogene Tumor suppressor gene Seq+ 69085 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PEX1-NBEA PEX1 chr7 92129018 - NBEA chr13 35615070 + Exonic hg19 BRCA TCGA-A2-A25C-01A 5 5 In-Frame Inter-chr q21.2 q13.3 Seq+ 69086 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PEX1-RAB34 PEX1 chr7 92157621 - RAB34 chr17 27043076 - Exonic hg19 PRAD TCGA-HC-A8CY-01A 3 2 Out-of-frame Inter-chr q21.2 q11.2 69087 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PEX11A-MESP1 PEX11A chr15 90233808 - MESP1 chr15 90293458 - Exonic hg19 UCEC TCGA-EO-A1Y7-01A 106 112 Out-of-frame Intra-chr q26.1 q26.1 Transcription factor Seq+ 69088 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PEX13-VPS24 PEX13 chr2 61244986 - VPS24 chr2 86737602 - Exonic hg19 LUSC TCGA-60-2715-01A 422 29 Out-of-frame Intra-chr p15 69089 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PEX14-EPHA2 PEX14 chr1 10555378 - EPHA2 chr1 16458934 - Exonic hg19 UCEC TCGA-AJ-A3NH-01A 11 2 Out-of-frame Intra-chr p36.22 p36.13 Tumor suppressor gene Seq+ 69090 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PEX14-HMOX2 PEX14 chr1 10596354 - HMOX2 chr16 4555485 + Exonic hg19 PRAD TCGA-CH-5768-01A 40 27 CDS-5'UTR Inter-chr p36.22 p13.3 Seq+ 69091 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PEX14-PRG4 PEX14 chr1 10555378 - PRG4 chr1 186281901 + Exonic hg19 LUSC TCGA-63-A5MH-01A 24 11 Out-of-frame Intra-chr p36.22 q31.1 Seq+ 69092 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PEX26-C22orf28 PEX26 chr22 18568024 - C22orf28 chr22 32784086 - Exonic hg19 SKCM TCGA-D9-A1JX-06A 19 11 Out-of-frame Intra-chr q11.21 Seq+ 69093 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PEX3-SLC35F1 PEX3 chr6 143795993 - SLC35F1 chr6 118635191 + Exonic hg19 SARC TCGA-3B-A9HS-01A 11 5 Out-of-frame Intra-chr q24.2 q22.2 Seq+ 69094 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PEX5-CLSTN3 PEX5 chr12 7344296 - CLSTN3 chr12 7310085 + Exonic hg19 BRCA TCGA-D8-A27W-01A 3 2 In-Frame Intra-chr p13.31 p13.31 Seq+ 69095 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PEX5-PRB2 PEX5 chr12 7351709 - PRB2 chr12 11544582 - Exonic hg19 BLCA TCGA-GU-A767-01A 15 175 CDS-3'UTR Intra-chr p13.31 p13.2 Seq+ 69096 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PEX7-MED23 PEX7 chr6 137219379 - MED23 chr6 131895435 - Exonic hg19 BRCA TCGA-B6-A0IQ-01A 12 3 In-Frame Intra-chr q23.3 q23.2 Seq+ 69097 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PFDN1-DNMT3L PFDN1 chr5 139680001 - DNMT3L chr21 45666445 - Exonic hg19 UCS TCGA-N8-A4PM-01A 29 21 In-Frame Inter-chr q31.3 q22.3 Seq+ 69098 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PFDN2-APOA2 PFDN2 chr1 161087742 - APOA2 chr1 161192840 - Exonic hg19 LIHC TCGA-CC-5263-01A 431 330 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 69099 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PFDN4-TSHZ2 PFDN4 chr20 52830997 - TSHZ2 chr20 52103683 + Exonic hg19 LIHC TCGA-FV-A496-01A 2 2 CDS-3'UTR Intra-chr q13.2 q13.2 Transcription factor Seq+ 69100 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PFKFB1-ALAS2 PFKFB1 chrX 55020344 - ALAS2 chrX 55035776 - Exonic hg19 LIHC TCGA-BC-A10Y-01A 12 5 In-Frame Intra-chr p11.21 p11.21 Seq+ 69101 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PFKFB3-AKR1C1 PFKFB3 chr10 6268328 - AKR1C1 chr10 4950543 + Exonic hg19 BLCA TCGA-E7-A5KE-01A 4 3 Out-of-frame Intra-chr p15.1 p15.1 69102 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PFKFB3-C10orf18 PFKFB3 chr10 6186976 - C10orf18 chr10 5788142 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 3 3 Out-of-frame Intra-chr p15.1 69103 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PFKFB3-GDI2 PFKFB3 chr10 6245299 - GDI2 chr10 5842668 - Exonic hg19 BLCA TCGA-FD-A5BS-01A 22 9 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 69104 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PFKFB3-PALM2-AKAP2 PFKFB3 chr10 6268328 - PALM2-AKAP2 chr9 112629771 + Exonic hg19 SARC TCGA-DX-A1KX-01A 3 1 Out-of-frame Inter-chr p15.1 q31.3 69105 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PFKFB3-ZNF831 PFKFB3 chr10 6259154 - ZNF831 chr20 57828033 + Exonic hg19 SKCM TCGA-ER-A196-01A 20 10 Out-of-frame Inter-chr p15.1 q13.32 Transcription factor Seq+ 69106 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PFKFB4-ARHGAP39 PFKFB4 chr3 48587297 - ARHGAP39 chr8 145781027 - Exonic hg19 UCEC TCGA-PG-A914-01A 9 1 In-Frame Inter-chr p21.31 q24.3 69107 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PFKFB4-MYRIP PFKFB4 chr3 48594114 - MYRIP chr3 39942278 + Exonic hg19 BRCA TCGA-E9-A1N6-01A 3 4 CDS-5'UTR Intra-chr p21.31 p22.1 Seq+ 69108 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PFKP-CAMK2G PFKP chr10 3159038 - CAMK2G chr10 75620647 - Exonic hg19 BLCA TCGA-4Z-AA84-01A 4 6 Out-of-frame Intra-chr p15.2 q22.2 Seq+ 69109 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PFKP-PSG1 PFKP chr10 3109899 - PSG1 chr19 43372507 - Exonic hg19 BLCA TCGA-FD-A3B3-01A 9 12 In-Frame Inter-chr p15.2 q13.2 69110 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PGAP1-SPAG16 PGAP1 chr2 197781142 - SPAG16 chr2 215274864 + Exonic hg19 BRCA TCGA-E9-A228-01A 127 92 Out-of-frame Intra-chr q33.1 q34 Seq+ 69111 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PGAP1-VWC2L PGAP1 chr2 197781142 - VWC2L chr2 215301353 + Exonic hg19 BRCA TCGA-E9-A228-01A 2 3 In-Frame Intra-chr q33.1 q34 69112 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PGAP3-ERBB2 PGAP3 chr17 37842175 - ERBB2 chr17 37844949 + Exonic hg19 CESC TCGA-VS-A9U5-01A 5 5 CDS-5'UTR Intra-chr q12 Oncogene q12 Oncogene Seq+ 69113 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PGAP3-ERBB2 PGAP3 chr17 37840850 - ERBB2 chr17 37880979 + Exonic hg19 CESC TCGA-VS-A9V0-01A 54 33 In-Frame Intra-chr q12 Oncogene q12 Oncogene Seq+ 69114 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PGAP3-GRB7 PGAP3 chr17 37844087 - GRB7 chr17 37898505 + Exonic hg19 LUSC TCGA-56-A4BX-01A 10 5 In-Frame Intra-chr q12 Oncogene q12 Seq+ 69115 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PGAP3-LRRC6 PGAP3 chr17 37840850 - LRRC6 chr8 133622507 - Exonic hg19 BLCA TCGA-4Z-AA7S-01A 3 2 In-Frame Inter-chr q12 Oncogene q24.22 Seq+ 69116 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PGAP3-MYOCD PGAP3 chr17 37840850 - MYOCD chr17 12639478 + Exonic hg19 BLCA TCGA-4Z-AA7S-01A 138 86 Out-of-frame Intra-chr q12 Oncogene p12 Seq+ 69117 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PGAP3-STARD3 PGAP3 chr17 37840850 - STARD3 chr17 37813261 + Exonic hg19 BLCA TCGA-DK-A2I6-01A 81 30 In-Frame Intra-chr q12 Oncogene q12 Seq+ 69118 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PGAP3-STARD3 PGAP3 chr17 37840850 - STARD3 chr17 37809734 + Exonic hg19 BLCA TCGA-E7-A7PW-01A 2 1 CDS-5'UTR Intra-chr q12 Oncogene q12 Seq+ 69119 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PGAP3-TOP2A PGAP3 chr17 37844087 - TOP2A chr17 38556915 - Exonic hg19 STAD TCGA-BR-8483-01A 36 162 Out-of-frame Intra-chr q12 Oncogene q21.2 Seq+ 69120 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PGC-CHGB PGC chr6 41704450 - CHGB chr20 5905618 + Exonic hg19 PAAD TCGA-HZ-A49H-01A 2 1 3'UTR-CDS Inter-chr p21.1 p12.3 69121 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PGD-CAMTA1 PGD chr1 10459761 - CAMTA1 chr1 7309551 + Exonic hg19 GBM TCGA-06-0190-01A 2 7 Out-of-frame Intra-chr p36.22 p36.31 Tumor suppressor gene Transcription factor Seq+ 69122 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PGD-CAMTA1 PGD chr1 10459761 - CAMTA1 chr1 7309551 + Exonic hg19 GBM TCGA-06-0190-02A 6 12 Out-of-frame Intra-chr p36.22 p36.31 Tumor suppressor gene Transcription factor Seq+ 69123 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PGD-NTSR1 PGD chr1 10459761 - NTSR1 chr20 61386037 + Exonic hg19 LUSC TCGA-58-A46K-01A 41 12 In-Frame Inter-chr p36.22 q13.33 Seq+ 69124 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PGGT1B-KIAA0825 PGGT1B chr5 114588834 - KIAA0825 chr5 93489829 - Exonic hg19 BRCA TCGA-AR-A256-01A 9 7 Out-of-frame Intra-chr q22.3 q15 Seq+ 69125 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PGM1-CHN1 PGM1 chr1 64117523 - CHN1 chr2 175676316 - Exonic hg19 MESO TCGA-3H-AB3M-01A 4 2 Out-of-frame Inter-chr p31.3 q31.1 Seq+ 69126 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PGM1-SLC16A12 PGM1 chr1 64059405 - SLC16A12 chr10 91222381 - Exonic hg19 PRAD TCGA-2A-AAYU-01A 4 3 5'UTR-5'UTR Inter-chr p31.3 q23.31 Seq+ 69127 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PGM2L1-C1orf61 PGM2L1 chr11 74079537 - C1orf61 chr1 156374393 - Exonic hg19 OV TCGA-23-1107-01A 7 54 In-Frame Inter-chr q13.4 q22 Seq+ 69128 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PGM2L1-CHRDL2 PGM2L1 chr11 74109096 - CHRDL2 chr11 74424524 - Exonic hg19 STAD TCGA-BR-8289-01A 3 18 In-Frame Intra-chr q13.4 q13.4 Seq+ 69129 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PGM2L1-PPME1 PGM2L1 chr11 74109096 - PPME1 chr11 73961999 + Exonic hg19 BRCA TCGA-Z7-A8R6-01A 35 25 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 69130 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PGM2L1-UVRAG PGM2L1 chr11 74109096 - UVRAG chr11 75694431 + Exonic hg19 BRCA TCGA-A1-A0SE-01A 4 1 In-Frame Intra-chr q13.4 q13.5 Tumor suppressor gene Seq+ 69131 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PGPEP1-KDM4C PGPEP1 chr19 18468425 - KDM4C chr9 7011698 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 2 2 Out-of-frame Inter-chr p13.11 p24.1 Seq+ 69132 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PGS1-BIRC5 PGS1 chr17 76395618 - BIRC5 chr17 76219546 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 27 25 In-Frame Intra-chr q25.3 q25.3 Oncogene Seq+ 69133 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PGS1-BPTF PGS1 chr17 76400170 - BPTF chr17 65916131 + Exonic hg19 ESCA TCGA-L5-A4OW-01A 15 163 In-Frame Intra-chr q25.3 q24.2 Transcription factor Seq+ 69134 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PGS1-CXCR5 PGS1 chr17 76395618 - CXCR5 chr11 118764305 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 10 6 Out-of-frame Inter-chr q25.3 q23.3 Seq+ 69135 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHACTR1-BCL11A PHACTR1 chr6 12750022 - BCL11A chr2 60679801 - Exonic hg19 LUAD TCGA-44-7670-01A 12 4 In-Frame Inter-chr p16.1 Oncogene Transcription factor Seq+ 69136 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHACTR2-PLAGL1 PHACTR2 chr6 143999346 - PLAGL1 chr6 144290115 - Exonic hg19 HNSC TCGA-BA-4076-01A 20 5 CDS-5'UTR Intra-chr q24.2 q24.2 Tumor suppressor gene Transcription factor Seq+ 69137 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHACTR3-BCAS1 PHACTR3 chr20 58152672 - BCAS1 chr20 52675262 - Exonic hg19 SARC TCGA-SI-AA8B-01A 2 11 5'UTR-5'UTR Intra-chr q13.32 q13.2 Seq+ 69138 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHACTR4-LRRC42 PHACTR4 chr1 28733974 - LRRC42 chr1 54426029 + Exonic hg19 OV TCGA-29-A5NZ-01A 8 63 Out-of-frame Intra-chr p35.3 Tumor suppressor gene p32.3 Seq+ 69139 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHACTR4-SESN2 PHACTR4 chr1 28696336 - SESN2 chr1 28595694 + Exonic hg19 LIHC TCGA-ZS-A9CF-01A 11 7 5'UTR-CDS Intra-chr p35.3 Tumor suppressor gene p35.3 Seq+ 69140 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHACTR4-SESN2 PHACTR4 chr1 28696336 - SESN2 chr1 28595694 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 8 9 5'UTR-CDS Intra-chr p35.3 Tumor suppressor gene p35.3 Seq+ 69141 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHB-LSM1 PHB chr17 47490539 - LSM1 chr8 38029551 - Exonic hg19 BRCA TCGA-A2-A0CU-01A 39 105 In-Frame Inter-chr q21.33 Tumor suppressor gene p11.23 Seq+ 69142 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHC2-CSMD2 PHC2 chr1 33895782 - CSMD2 chr1 33992858 - Exonic hg19 LUAD TCGA-62-A46Y-01A 2 2 5'UTR-CDS Intra-chr p35.1 p35.1 69143 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHC2-HSP90AA1 PHC2 chr1 33794471 - HSP90AA1 chr14 102568422 - Exonic hg19 PRAD TCGA-YL-A8HM-01A 3 5 Out-of-frame Inter-chr p35.1 q32.31 Oncogene Seq+ 69144 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHC2-MFSD11 PHC2 chr1 33815198 - MFSD11 chr17 74763468 + Exonic hg19 SARC TCGA-DX-A6YV-01A 4 9 5'UTR-CDS Inter-chr p35.1 q25.1 Seq+ 69145 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHC2-NLRP4 PHC2 chr1 33815198 - NLRP4 chr19 56382193 + Exonic hg19 UCEC TCGA-DF-A2KR-01A 18 44 5'UTR-CDS Inter-chr p35.1 q13.43 Seq+ 69146 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHC2-ZSCAN20 PHC2 chr1 33895782 - ZSCAN20 chr1 33944780 + Exonic hg19 BRCA TCGA-D8-A1XZ-01A 6 2 5'UTR-5'UTR Intra-chr p35.1 p35.1 Transcription factor 69147 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHC3-FNDC3B PHC3 chr3 169863211 - FNDC3B chr3 172114954 + Exonic hg19 LUSC TCGA-56-1622-01A 79 46 In-Frame Intra-chr q26.2 Tumor suppressor gene q26.31 Seq+ 69148 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHC3-FNDC3B PHC3 chr3 169831148 - FNDC3B chr3 172114954 + Exonic hg19 ESCA TCGA-L5-A88S-01A 4 34 Out-of-frame Intra-chr q26.2 Tumor suppressor gene q26.31 Seq+ 69149 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHC3-GNA12 PHC3 chr3 169896561 - GNA12 chr7 2834777 - Exonic hg19 HNSC TCGA-CQ-A4CA-01A 11 1 In-Frame Inter-chr q26.2 Tumor suppressor gene p22.2 69150 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHC3-NCEH1 PHC3 chr3 169831148 - NCEH1 chr3 172365904 - Exonic hg19 ESCA TCGA-L5-A88S-01A 5 17 Out-of-frame Intra-chr q26.2 Tumor suppressor gene q26.31 Seq+ 69151 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHC3-NFKBIL1 PHC3 chr3 169889161 - NFKBIL1 chr6 31515940 + Exonic hg19 UCS TCGA-NA-A4QX-01A 18 16 In-Frame Inter-chr q26.2 Tumor suppressor gene Seq+ 69152 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHC3-SLC7A14 PHC3 chr3 169896561 - SLC7A14 chr3 170185165 - Exonic hg19 LIHC TCGA-2Y-A9H0-01A 126 49 Out-of-frame Intra-chr q26.2 Tumor suppressor gene q26.2 Seq+ 69153 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHC3-SLC7A14 PHC3 chr3 169854207 - SLC7A14 chr3 170185165 - Exonic hg19 LUSC TCGA-94-7943-01A 14 3 In-Frame Intra-chr q26.2 Tumor suppressor gene q26.2 Seq+ 69154 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHC3-SLC7A14 PHC3 chr3 169863211 - SLC7A14 chr3 170185165 - Exonic hg19 KIRP TCGA-G7-6793-01A 8 4 Out-of-frame Intra-chr q26.2 Tumor suppressor gene q26.2 Seq+ 69155 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF10-C6orf70 PHF10 chr6 170123941 - C6orf70 chr6 170166734 + Exonic hg19 SARC TCGA-IE-A4EI-01A 2 2 In-Frame Intra-chr q27 69156 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF11-SETDB2 PHF11 chr13 50098352 - SETDB2 chr13 50054355 + Exonic hg19 LUSC TCGA-NC-A5HJ-01A 4 3 Out-of-frame Intra-chr q14.2 q14.2 Transcription factor Seq+ 69157 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF12-LIG3 PHF12 chr17 27277083 - LIG3 chr17 33324757 + Exonic hg19 PRAD TCGA-G9-7509-01A 7 3 In-Frame Intra-chr q11.2 q12 Tumor suppressor gene Seq+ 69158 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF12-PIPOX PHF12 chr17 27277083 - PIPOX chr17 27371877 + Exonic hg19 BLCA TCGA-UY-A9PD-01A 5 6 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 69159 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF12-PLXDC1 PHF12 chr17 27277083 - PLXDC1 chr17 37296085 - Exonic hg19 LUAD TCGA-38-4630-01A 47 20 Out-of-frame Intra-chr q11.2 q12 Seq+ 69160 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF12-SEZ6 PHF12 chr17 27277083 - SEZ6 chr17 27309057 - Exonic hg19 OV TCGA-24-2023-01A 5 16 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 69161 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF12-TMEM97 PHF12 chr17 27277083 - TMEM97 chr17 26652529 + Exonic hg19 LUAD TCGA-05-4433-01A 3 1 Out-of-frame Intra-chr q11.2 q11.2 69162 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF15-SGCD PHF15 chr5 133873773 - SGCD chr5 155756544 + Exonic hg19 PRAD TCGA-YL-A9WY-01A 3 5 CDS-5'UTR Intra-chr q33.2 69163 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF15-UBE2B PHF15 chr5 133909452 - UBE2B chr5 133724016 + Exonic hg19 LIHC TCGA-2Y-A9GY-01A 6 3 In-Frame Intra-chr q31.1 69164 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF15-UBE2B PHF15 chr5 133861701 - UBE2B chr5 133725916 + Exonic hg19 ACC TCGA-OR-A5JK-01A 18 10 5'UTR-CDS Intra-chr q31.1 69165 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF16-CXorf31 PHF16 chrX 46772154 - CXorf31 chrX 46754016 - Exonic hg19 BRCA TCGA-D8-A1JL-01A 6 7 5'UTR-3'UTR Intra-chr Seq+ 69166 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF17-LARP1B PHF17 chr4 129752965 - LARP1B chr4 129083349 + Exonic hg19 STAD TCGA-KB-A6F7-01A 7 35 Out-of-frame Intra-chr q28.2 Seq+ 69167 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF20-ADNP PHF20 chr20 34389527 - ADNP chr20 49511049 - Exonic hg19 LUAD TCGA-91-6831-01A 2 4 Out-of-frame Intra-chr q11.22 Transcription factor q13.13 Transcription factor Seq+ 69168 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF20-DYNLRB1 PHF20 chr20 34360001 - DYNLRB1 chr20 33114073 + Exonic hg19 BRCA TCGA-E2-A1LE-01A 42 152 5'UTR-CDS Intra-chr q11.22 Transcription factor q11.22 Seq+ 69169 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF20-RPN2 PHF20 chr20 34528969 - RPN2 chr20 35812583 + Exonic hg19 BRCA TCGA-A8-A079-01A 68 51 In-Frame Intra-chr q11.22 Transcription factor q11.23 Seq+ 69170 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF20-SPAG4 PHF20 chr20 34487570 - SPAG4 chr20 34207117 + Exonic hg19 ACC TCGA-OR-A5JT-01A 23 14 In-Frame Intra-chr q11.22 Transcription factor q11.22 Seq+ 69171 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF21A-AC091172.1 PHF21A chr11 46098305 - AC091172.1 chr17 40117011 + Exonic hg19 PCPG TCGA-QR-A70G-01B 41 19 Out-of-frame Inter-chr p11.2 Transcription factor 69172 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF21A-ACSL6 PHF21A chr11 46098305 - ACSL6 chr5 131309093 - Exonic hg19 PRAD TCGA-ZG-A9LZ-01A 5 5 In-Frame Inter-chr p11.2 Transcription factor q31.1 Seq+ 69173 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF21A-ALKBH3 PHF21A chr11 46142486 - ALKBH3 chr11 43904133 + Exonic hg19 LUAD TCGA-91-8497-01A 6 5 5'UTR-5'UTR Intra-chr p11.2 Transcription factor p11.2 Seq+ 69174 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF21A-AMBRA1 PHF21A chr11 46113734 - AMBRA1 chr11 46515754 - Exonic hg19 LUAD TCGA-91-8499-01A 2 1 5'UTR-CDS Intra-chr p11.2 Transcription factor p11.2 Seq+ 69175 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF21A-AMBRA1 PHF21A chr11 46098305 - AMBRA1 chr11 46529920 - Exonic hg19 STAD TCGA-BR-4357-01A 3 7 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 69176 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF21A-AMBRA1 PHF21A chr11 46139473 - AMBRA1 chr11 46570050 - Exonic hg19 LUSC TCGA-L3-A524-01A 6 1 5'UTR-5'UTR Intra-chr p11.2 Transcription factor p11.2 Seq+ 69177 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF21A-ARHGAP1 PHF21A chr11 46142486 - ARHGAP1 chr11 46717706 - Exonic hg19 BLCA TCGA-DK-A1AD-01A 6 1 5'UTR-5'UTR Intra-chr p11.2 Transcription factor p11.2 Seq+ 69178 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF21A-ARHGAP1 PHF21A chr11 46142486 - ARHGAP1 chr11 46717706 - Exonic hg19 UCS TCGA-NA-A4R1-01A 16 10 5'UTR-5'UTR Intra-chr p11.2 Transcription factor p11.2 Seq+ 69179 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF21A-C18orf34 PHF21A chr11 46098305 - C18orf34 chr18 30847261 - Exonic hg19 BRCA TCGA-BH-A0BG-01A 49 39 In-Frame Inter-chr p11.2 Transcription factor Seq+ 69180 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF21A-CAMK1D PHF21A chr11 46098305 - CAMK1D chr10 12811672 + Exonic hg19 BRCA TCGA-A8-A09D-01A 16 14 In-Frame Inter-chr p11.2 Transcription factor p13 Seq+ 69181 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF21A-CKAP5 PHF21A chr11 45986866 - CKAP5 chr11 46804918 - Exonic hg19 LUSC TCGA-LA-A7SW-01A 5 4 In-Frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 69182 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF21A-CNP PHF21A chr11 46098305 - CNP chr17 40120086 + Exonic hg19 PCPG TCGA-QR-A70G-01B 5 3 In-Frame Inter-chr p11.2 Transcription factor q21.2 Seq+ 69183 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF21A-GLIS2 PHF21A chr11 45967391 - GLIS2 chr16 4386726 + Exonic hg19 LAML TCGA-AB-2965-03A 3 1 Out-of-frame Inter-chr p11.2 Transcription factor p13.3 Transcription factor Seq+ 69184 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF21A-GLIS2 PHF21A chr11 45967391 - GLIS2 chr16 4386726 + Exonic hg19 HNSC TCGA-CN-6994-01A 24 7 Out-of-frame Inter-chr p11.2 Transcription factor p13.3 Transcription factor Seq+ 69185 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF21A-LEUTX PHF21A chr11 46142486 - LEUTX chr19 40275167 + Exonic hg19 ESCA TCGA-L5-A4OS-01A 3 13 5'UTR-5'UTR Inter-chr p11.2 Transcription factor Transcription factor Seq+ 69186 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF21A-NUTF2 PHF21A chr11 46098305 - NUTF2 chr16 67902243 + Exonic hg19 BLCA TCGA-2F-A9KP-01A 14 22 In-Frame Inter-chr p11.2 Transcription factor q22.1 Seq+ 69187 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF21A-PACSIN3 PHF21A chr11 46098305 - PACSIN3 chr11 47204620 - Exonic hg19 LUAD TCGA-69-7979-01A 3 9 CDS-5'UTR Intra-chr p11.2 Transcription factor p11.2 Seq+ 69188 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF21A-TMEM123 PHF21A chr11 46098305 - TMEM123 chr11 102272937 - Exonic hg19 CESC TCGA-EA-A411-01A 8 4 Out-of-frame Intra-chr p11.2 Transcription factor q22.2 Seq+ 69189 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF21B-CLTCL1 PHF21B chr22 45404426 - CLTCL1 chr22 19230459 - Exonic hg19 KIRP TCGA-P4-A5EB-01A 3 2 In-Frame Intra-chr q13.31 q11.21 69190 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF21B-NOC4L PHF21B chr22 45404426 - NOC4L chr12 132635526 + Exonic hg19 PRAD TCGA-XK-AAJR-01A 2 1 Out-of-frame Inter-chr q13.31 q24.33 69191 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF21B-WNT7B PHF21B chr22 45404426 - WNT7B chr22 46327249 - Exonic hg19 UCEC TCGA-AX-A3FW-01A 2 6 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 69192 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF23-TOM1 PHF23 chr17 7142565 - TOM1 chr22 35741718 + Exonic hg19 LIHC TCGA-ZS-A9CD-01A 2 10 Out-of-frame Inter-chr p13.1 q12.3 Seq+ 69193 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF3-C6orf123 PHF3 chr6 64346055 - C6orf123 chr6 168191773 - Exonic hg19 SKCM TCGA-EB-A82B-01A 24 15 5'UTR-3'UTR Intra-chr q12 69194 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF3-ENPP3 PHF3 chr6 64356700 - ENPP3 chr6 131958375 + Exonic hg19 UCEC TCGA-AJ-A3IA-01A 8 3 Out-of-frame Intra-chr q12 q23.2 Seq+ 69195 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF3-EYS PHF3 chr6 64356700 - EYS chr6 64791895 - Exonic hg19 BRCA TCGA-BH-A1EN-01A 18 1 In-Frame Intra-chr q12 q12 69196 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF3-QKI PHF3 chr6 64346055 - QKI chr6 163983014 + Exonic hg19 UVM TCGA-VD-A8KJ-01A 19 18 5'UTR-CDS Intra-chr q12 q26 Seq+ 69197 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF3-R3HCC1 PHF3 chr6 64346055 - R3HCC1 chr8 23146019 + Exonic hg19 PRAD TCGA-KK-A8I4-01A 47 41 5'UTR-5'UTR Inter-chr q12 p21.3 Seq+ 69198 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF3-SYT4 PHF3 chr6 64356700 - SYT4 chr18 40854359 - Exonic hg19 SARC TCGA-SI-A71O-01A 5 5 In-Frame Inter-chr q12 q12.3 Seq+ 69199 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHF8-FAM120C PHF8 chrX 54069064 - FAM120C chrX 54099720 - Exonic hg19 UCEC TCGA-B5-A0JN-01A 4 2 Out-of-frame Intra-chr p11.22 p11.22 Seq+ 69200 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHGDH-ANXA1 PHGDH chr1 120286836 - ANXA1 chr9 75772570 + Exonic hg19 LGG TCGA-FG-6688-01A 2 18 Out-of-frame Inter-chr p12 q21.13 Tumor suppressor gene 69201 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHIP-FTO PHIP chr6 79752560 - FTO chr16 54145674 + Exonic hg19 LUAD TCGA-55-6712-01A 47 11 Out-of-frame Inter-chr q14.1 q12.2 Seq+ 69202 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHIP-HMGN3 PHIP chr6 79752560 - HMGN3 chr6 79924739 - Exonic hg19 COAD TCGA-AA-A02K-01A 3 2 In-Frame Intra-chr q14.1 q14.1 Transcription factor Seq+ 69203 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHIP-INADL PHIP chr6 79707131 - INADL chr1 62271120 + Exonic hg19 BRCA TCGA-A7-A5ZV-01A 10 8 Out-of-frame Inter-chr q14.1 Seq+ 69204 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHIP-MYO6 PHIP chr6 79770195 - MYO6 chr6 76527218 + Exonic hg19 SARC TCGA-DX-A7EN-01A 2 3 CDS-5'UTR Intra-chr q14.1 q14.1 Seq+ 69205 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHKB-PDE3A PHKB chr16 47703328 - PDE3A chr12 20799424 + Exonic hg19 LUAD TCGA-MN-A4N5-01A 7 8 Out-of-frame Inter-chr q12.1 p12.2 Seq+ 69206 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHKB-SCN8A PHKB chr16 47730399 - SCN8A chr12 52077958 + Exonic hg19 SARC TCGA-DX-A23R-01A 36 16 In-Frame Inter-chr q12.1 q13.13 Seq+ 69207 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHLDA3-MYBPH PHLDA3 chr1 201437469 - MYBPH chr1 203139578 - Exonic hg19 BRCA TCGA-E9-A22D-01A 77 37 3'UTR-CDS Intra-chr q32.1 Tumor suppressor gene q32.1 Seq+ 69208 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHLDB1-IL10RA PHLDB1 chr11 118478414 - IL10RA chr11 117864714 + Exonic hg19 LGG TCGA-DU-6396-01A 11 2 5'UTR-5'UTR Intra-chr q23.3 q23.3 69209 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHLDB1-RNF121 PHLDB1 chr11 118478414 - RNF121 chr11 71671796 + Exonic hg19 PRAD TCGA-KK-A7AP-01A 12 3 5'UTR-5'UTR Intra-chr q23.3 q13.4 Seq+ 69210 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHLDB1-SPAG9 PHLDB1 chr11 118478414 - SPAG9 chr17 49133843 - Exonic hg19 SARC TCGA-DX-AB2Z-01A 3 2 5'UTR-CDS Inter-chr q23.3 q21.33 69211 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHLDB1-UBE4A PHLDB1 chr11 118503013 - UBE4A chr11 118243222 + Exonic hg19 MESO TCGA-ZN-A9VS-01A 11 4 In-Frame Intra-chr q23.3 q23.3 Seq+ 69212 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHLDB2-CD96 PHLDB2 chr3 111564782 - CD96 chr3 111342601 + Exonic hg19 LUSC TCGA-51-6867-01A 3 3 In-Frame Intra-chr q13.2 q13.13 Seq+ 69213 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHLDB2-CD96 PHLDB2 chr3 111564782 - CD96 chr3 111366390 + Exonic hg19 HNSC TCGA-BA-5555-01A 8 10 In-Frame Intra-chr q13.2 q13.13 Seq+ 69214 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHLDB2-KCNAB1 PHLDB2 chr3 111578423 - KCNAB1 chr3 156139405 + Exonic hg19 BLCA TCGA-DK-A3WY-01A 2 4 5'UTR-CDS Intra-chr q13.2 q25.31 Seq+ 69215 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHLDB2-RIMS2 PHLDB2 chr3 111451550 - RIMS2 chr8 105160835 + Exonic hg19 LUSC TCGA-66-2742-01A 15 7 Out-of-frame Inter-chr q13.2 q22.3 Seq+ 69216 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHLPP1-ADAMTS13 PHLPP1 chr18 60384492 - ADAMTS13 chr9 136288221 + Exonic hg19 LGG TCGA-S9-A7J0-01A 11 1 Out-of-frame Inter-chr q21.33 Tumor suppressor gene Seq+ 69217 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHLPP1-WDR12 PHLPP1 chr18 60587347 - WDR12 chr2 203759349 - Exonic hg19 LUSC TCGA-21-1083-01A 13 5 Out-of-frame Inter-chr q21.33 Tumor suppressor gene q33.2 Seq+ 69218 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHLPP2-KIF22 PHLPP2 chr16 71710350 - KIF22 chr16 29808214 + Exonic hg19 LUAD TCGA-97-A4M1-01A 7 4 In-Frame Intra-chr q22.2 Tumor suppressor gene p11.2 Seq+ 69219 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHOSPHO1-KRT23 PHOSPHO1 chr17 47304009 - KRT23 chr17 39086348 - Exonic hg19 BRCA TCGA-AQ-A0Y5-01A 61 28 Out-of-frame Intra-chr q21.32 Seq+ 69220 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHRF1-LRRC56 PHRF1 chr11 601701 - LRRC56 chr11 551131 + Exonic hg19 LUAD TCGA-55-6971-01A 3 1 In-Frame Intra-chr p15.5 p15.5 Seq+ 69221 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHRF1-LRRC56 PHRF1 chr11 598502 - LRRC56 chr11 549902 + Exonic hg19 BRCA TCGA-A8-A08G-01A 9 4 Out-of-frame Intra-chr p15.5 p15.5 Seq+ 69222 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHRF1-PTDSS2 PHRF1 chr11 582081 - PTDSS2 chr11 479085 + Exonic hg19 LUSC TCGA-85-8580-01A 6 2 In-Frame Intra-chr p15.5 Seq+ 69223 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHTF1-ESRRG PHTF1 chr1 114300321 - ESRRG chr1 217113015 - Exonic hg19 MESO TCGA-TS-A7P1-01A 4 1 CDS-5'UTR Intra-chr p13.2 q41 Transcription factor 69224 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHTF1-PTPN22 PHTF1 chr1 114300321 - PTPN22 chr1 114362276 - Exonic hg19 CESC TCGA-C5-A3HD-01B 2066 2944 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 69225 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHTF1-RSBN1 PHTF1 chr1 114300321 - RSBN1 chr1 114340658 - Exonic hg19 CESC TCGA-C5-A3HD-01B 121 74 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 69226 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHTF2-AC007000.1 PHTF2 chr7 77469617 - AC007000.1 chr7 76796975 + Exonic hg19 HNSC TCGA-HD-7753-01A 2 3 Out-of-frame Intra-chr q11.23 q11.23 69227 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHTF2-BET1 PHTF2 chr7 77539726 - BET1 chr7 93628606 - Exonic hg19 BLCA TCGA-BT-A20J-01A 6 7 Out-of-frame Intra-chr q11.23 q21.3 Seq+ 69228 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHTF2-KBTBD2 PHTF2 chr7 77531237 - KBTBD2 chr7 32919554 - Exonic hg19 SARC TCGA-IW-A3M4-01A 2 1 CDS-5'UTR Intra-chr q11.23 p14.3 69229 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHTF2-RAB1A PHTF2 chr7 77469617 - RAB1A chr2 65316204 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 17 29 In-Frame Inter-chr q11.23 p14 Seq+ 69230 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHTF2-RSBN1L PHTF2 chr7 77469617 - RSBN1L chr7 77402464 + Exonic hg19 LUSC TCGA-63-A5MI-01A 4 3 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 69231 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHTF2-RUNDC3B PHTF2 chr7 77583211 - RUNDC3B chr7 87459200 + Exonic hg19 BRCA TCGA-A2-A0SV-01A 4 1 Out-of-frame Intra-chr q11.23 q21.12 69232 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHYHD1-LRRC8A PHYHD1 chr9 131689475 - LRRC8A chr9 131678375 + Exonic hg19 BRCA TCGA-AN-A0XU-01A 3 3 In-Frame Intra-chr q34.11 q34.11 Seq+ 69233 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PHYHD1-ZER1 PHYHD1 chr9 131684635 - ZER1 chr9 131517938 - Exonic hg19 BRCA TCGA-E2-A158-01A 18 7 CDS-5'UTR Intra-chr q34.11 q34.11 69234 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PI3-CLCN3 PI3 chr20 43805185 - CLCN3 chr4 170623929 + Exonic hg19 HNSC TCGA-HD-A633-01A 2 33 Out-of-frame Inter-chr q13.12 q33 69235 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PI4K2A-UBTD1 PI4K2A chr10 99344671 - UBTD1 chr10 99329895 + Exonic hg19 LIHC TCGA-BC-A10T-01A 7 5 5'UTR-CDS Intra-chr q24.2 q24.1 69236 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PI4K2B-INSR PI4K2B chr4 25236053 - INSR chr19 7267907 - Exonic hg19 SARC TCGA-DX-A1KZ-01A 2 1 In-Frame Inter-chr p15.2 p13.2 TK:InsR Seq+ 69237 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PI4KA-CLTCL1 PI4KA chr22 21188850 - CLTCL1 chr22 19230459 - Exonic hg19 SKCM TCGA-DA-A1I8-06A 7 2 Out-of-frame Intra-chr q11.21 q11.21 69238 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PI4KA-DEPDC5 PI4KA chr22 21101871 - DEPDC5 chr22 32234671 + Exonic hg19 UCS TCGA-NA-A4QY-01A 5 1 Out-of-frame Intra-chr q11.21 q12.2 69239 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PI4KA-FAM175A PI4KA chr22 21147481 - FAM175A chr4 84403397 - Exonic hg19 PRAD TCGA-VP-A87J-01A 4 10 In-Frame Inter-chr q11.21 q21.23 Seq+ 69240 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PI4KA-FAM19A5 PI4KA chr22 21147481 - FAM19A5 chr22 49103529 + Exonic hg19 BRCA TCGA-C8-A12W-01A 8 7 Out-of-frame Intra-chr q11.21 q13.32 Seq+ 69241 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PI4KA-PRODH PI4KA chr22 21212858 - PRODH chr22 18913235 - Exonic hg19 LUSC TCGA-77-6842-01A 4 2 Out-of-frame Intra-chr q11.21 q11.21 Tumor suppressor gene Seq+ 69242 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PI4KA-RREB1 PI4KA chr22 21188850 - RREB1 chr6 7211037 + Exonic hg19 LUSC TCGA-21-1081-01A 22 22 Out-of-frame Inter-chr q11.21 p24.3 Transcription factor Seq+ 69243 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PI4KA-SNAP29 PI4KA chr22 21212858 - SNAP29 chr22 21224625 + Exonic hg19 ESCA TCGA-LN-A4A2-01A 9 100 In-Frame Intra-chr q11.21 q11.21 Seq+ 69244 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PI4KA-ZNF274 PI4KA chr22 21101871 - ZNF274 chr19 58718087 + Exonic hg19 LUAD TCGA-05-4434-01A 5 6 Out-of-frame Inter-chr q11.21 q13.43 Transcription factor Seq+ 69245 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PI4KB-SELENBP1 PI4KB chr1 151298648 - SELENBP1 chr1 151342245 - Exonic hg19 BRCA TCGA-A8-A07C-01A 51 18 Out-of-frame Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 69246 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PI4KB-SELENBP1 PI4KB chr1 151288049 - SELENBP1 chr1 151342245 - Exonic hg19 CESC TCGA-VS-A950-01A 129 32 Out-of-frame Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 69247 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PI4KB-SYT11 PI4KB chr1 151299747 - SYT11 chr1 155850291 + Exonic hg19 LUAD TCGA-86-A4P7-01A 14 1 5'UTR-CDS Intra-chr q21.3 q22 Seq+ 69248 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIAS1-HMCN2 PIAS1 chr15 68379088 - HMCN2 chr9 133297964 + Exonic hg19 PRAD TCGA-KK-A7B1-01A 45 30 Out-of-frame Inter-chr q23 Tumor suppressor gene q34.11 Seq+ 69249 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIAS1-MAP2K5 PIAS1 chr15 68379088 - MAP2K5 chr15 67984817 + Exonic hg19 CESC TCGA-RA-A741-01A 3 1 In-Frame Intra-chr q23 Tumor suppressor gene q23 STE:STE7 69250 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIAS1-ZNF609 PIAS1 chr15 68346688 - ZNF609 chr15 64970315 + Exonic hg19 PRAD TCGA-J9-A8CL-01A 3 16 In-Frame Intra-chr q23 Tumor suppressor gene q22.31 Transcription factor Seq+ 69251 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIAS3-BZRAP1 PIAS3 chr1 145584836 - BZRAP1 chr17 56384329 - Exonic hg19 SARC TCGA-DX-AB3A-01A 9 5 In-Frame Inter-chr q21.1 69252 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIAS3-REN PIAS3 chr1 145575404 - REN chr1 204131291 - Exonic hg19 OV TCGA-24-2024-01A 3 25 5'UTR-CDS Intra-chr q21.1 q32.1 Seq+ 69253 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIAS4-ZFR2 PIAS4 chr19 4013347 - ZFR2 chr19 3823401 - Exonic hg19 LGG TCGA-HT-A5RC-01A 19 8 In-Frame Intra-chr p13.3 p13.3 Seq+ 69254 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIAS4-ZNF787 PIAS4 chr19 4033578 - ZNF787 chr19 56614596 - Exonic hg19 SARC TCGA-3B-A9HX-01A 69 88 CDS-5'UTR Intra-chr p13.3 q13.43 Transcription factor Seq+ 69255 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIBF1-C11orf65 PIBF1 chr13 73491304 - C11orf65 chr11 108302565 - Exonic hg19 LUSC TCGA-21-1082-01A 2 1 Out-of-frame Inter-chr q21.33 q22.3 69256 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PICALM-DDX21 PICALM chr11 85668731 - DDX21 chr10 70723858 + Exonic hg19 PRAD TCGA-EJ-7321-01A 2 2 Out-of-frame Inter-chr q14.2 q22.1 69257 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PICALM-ME3 PICALM chr11 85707869 - ME3 chr11 86198482 - Exonic hg19 OV TCGA-VG-A8LO-01A 11 51 Out-of-frame Intra-chr q14.2 q14.2 Seq+ 69258 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PICALM-MLLT10 PICALM chr11 85685751 - MLLT10 chr10 21940602 + Exonic hg19 LAML TCGA-AB-2849-03A 15 11 In-Frame Inter-chr q14.2 p12.31 Oncogene KB Pub Seq+ 69259 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PICALM-MLLT10 PICALM chr11 85685751 - MLLT10 chr10 21940602 + Exonic hg19 LAML TCGA-AB-2855-03A 33 13 In-Frame Inter-chr q14.2 p12.31 Oncogene KB Pub Seq+ 69260 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PICALM-RP11-849H4.2 PICALM chr11 85711686 - RP11-849H4.2 chr11 71576900 - Exonic hg19 BRCA TCGA-BH-A18L-01A 13 7 Out-of-frame Intra-chr q14.2 69261 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PICK1-EIF4ENIF1 PICK1 chr22 38461137 - EIF4ENIF1 chr22 31851973 - Exonic hg19 PRAD TCGA-HC-7821-01A 4 3 In-Frame Intra-chr q13.1 q12.2 69262 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PICK1-GCAT PICK1 chr22 38453594 - GCAT chr22 38209470 + Exonic hg19 CESC TCGA-EA-A556-01A 14 11 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 69263 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PICK1-MYPOP PICK1 chr22 38455352 - MYPOP chr19 46394581 - Exonic hg19 UCEC TCGA-PG-A914-01A 35 18 Out-of-frame Inter-chr q13.1 q13.32 Transcription factor Seq+ 69264 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PICK1-POLR2F PICK1 chr22 38453857 - POLR2F chr22 38352780 + Exonic hg19 BRCA TCGA-B6-A0IJ-01A 27 19 In-Frame Intra-chr q13.1 q13.1 Seq+ 69265 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PID1-DNER PID1 chr2 230020534 - DNER chr2 230456604 - Exonic hg19 LUAD TCGA-44-5643-01A 6 5 In-Frame Intra-chr q36.3 q36.3 69266 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PID1-MRPS6 PID1 chr2 230020534 - MRPS6 chr21 35497641 + Exonic hg19 SARC TCGA-DX-A3U7-01A 192 88 In-Frame Inter-chr q36.3 q22.11 Seq+ 69267 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIGG-SPINK2 PIGG chr4 502759 - SPINK2 chr4 57676350 - Exonic hg19 GBM TCGA-27-1830-01A 3 6 Out-of-frame Intra-chr p16.3 q12 Seq+ 69268 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIGK-CSGALNACT1 PIGK chr1 77672325 - CSGALNACT1 chr8 19363641 - Exonic hg19 PCPG TCGA-SR-A6MP-01A 2 6 CDS-5'UTR Inter-chr p31.1 p21.3 Seq+ 69269 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIGK-ST6GALNAC3 PIGK chr1 77620134 - ST6GALNAC3 chr1 76877693 + Exonic hg19 BRCA TCGA-LL-A6FP-01A 4 2 Out-of-frame Intra-chr p31.1 p31.1 Seq+ 69270 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIGK-TGFBR3 PIGK chr1 77587960 - TGFBR3 chr1 92187701 - Exonic hg19 LUSC TCGA-85-8582-01A 2 3 In-Frame Intra-chr p31.1 p22.1 Tumor suppressor gene Seq+ 69271 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIGL-TBC1D26 PIGL chr17 16137384 - TBC1D26 chr17 15643414 + Exonic hg19 BRCA TCGA-E2-A14P-01A 16 15 In-Frame Intra-chr p11.2 p12 Seq+ 69272 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIGN-C18orf45 PIGN chr18 59828366 - C18orf45 chr18 21001408 - Exonic hg19 OV TCGA-5X-AA5U-01A 2 19 Out-of-frame Intra-chr q21.33 69273 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIGN-CTNNA2 PIGN chr18 59768308 - CTNNA2 chr2 80874710 + Exonic hg19 BRCA TCGA-E9-A1N9-01A 29 18 Out-of-frame Inter-chr q21.33 p12 Tumor suppressor gene Seq+ 69274 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIGS-SPAG5 PIGS chr17 26887067 - SPAG5 chr17 26913517 - Exonic hg19 OV TCGA-24-1847-01A 8 5 In-Frame Intra-chr q11.2 q11.2 Seq+ 69275 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIGS-SPAG5 PIGS chr17 26883184 - SPAG5 chr17 26905310 - Exonic hg19 BLCA TCGA-4Z-AA7M-01A 5 5 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 69276 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIGU-ACSS2 PIGU chr20 33225680 - ACSS2 chr20 33500899 + Exonic hg19 LUSC TCGA-56-8201-01A 8 5 In-Frame Intra-chr q11.22 q11.22 Seq+ 69277 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIGU-BCAS3 PIGU chr20 33231968 - BCAS3 chr17 59445688 + Exonic hg19 BRCA TCGA-AC-A62V-01A 16 40 Out-of-frame Inter-chr q11.22 q23.2 Seq+ 69278 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIGU-MAP1LC3A PIGU chr20 33162908 - MAP1LC3A chr20 33147151 + Exonic hg19 PRAD TCGA-HC-7752-01A 4 7 In-Frame Intra-chr q11.22 q11.22 Seq+ 69279 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIGU-NCOA6 PIGU chr20 33233079 - NCOA6 chr20 33315211 - Exonic hg19 BLCA TCGA-FD-A6TH-01A 14 13 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 69280 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIGU-NCOA6 PIGU chr20 33162908 - NCOA6 chr20 33315211 - Exonic hg19 UCS TCGA-NA-A4QX-01A 3 3 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 69281 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIGU-PITPNC1 PIGU chr20 33231968 - PITPNC1 chr17 65528918 + Exonic hg19 BRCA TCGA-AC-A62V-01A 8 24 In-Frame Inter-chr q11.22 q24.2 Seq+ 69282 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIGU-PTPRT PIGU chr20 33162908 - PTPRT chr20 40911165 - Exonic hg19 BRCA TCGA-E2-A1B1-01A 8 4 In-Frame Intra-chr q11.22 q13.11 Oncogene Tumor suppressor gene Seq+ 69283 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIGU-XRCC4 PIGU chr20 33203846 - XRCC4 chr5 82554349 + Exonic hg19 BRCA TCGA-A8-A07C-01A 6 4 Out-of-frame Inter-chr q11.22 q14.2 Seq+ 69284 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIGZ-EPHB3 PIGZ chr3 196678692 - EPHB3 chr3 184289106 + Exonic hg19 BRCA TCGA-AQ-A04J-01A 2 1 In-Frame Intra-chr q29 q27.1 Tumor suppressor gene 69285 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIH1D1-ALDH16A1 PIH1D1 chr19 49954742 - ALDH16A1 chr19 49961743 + Exonic hg19 BRCA TCGA-D8-A1XD-01A 41 46 In-Frame Intra-chr q13.33 q13.33 Seq+ 69286 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIK3AP1-AVPI1 PIK3AP1 chr10 98408416 - AVPI1 chr10 99437782 - Exonic hg19 LIHC TCGA-KR-A7K8-01A 5 5 Out-of-frame Intra-chr q24.1 q24.2 Seq+ 69287 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIK3C2A-RP11-113D6.6 PIK3C2A chr11 17115808 - RP11-113D6.6 chr11 18162158 - Exonic hg19 BRCA TCGA-BH-A18T-01A 15 5 Out-of-frame Intra-chr p15.1 69288 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIK3C2G-CTDSP2 PIK3C2G chr12 18435693 - CTDSP2 chr12 58218102 - Exonic hg19 SARC TCGA-DX-A1KZ-01A 8 14 In-Frame Intra-chr p12.3 q14.1 Seq+ 69289 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIK3C2G-PPFIBP1 PIK3C2G chr12 18552781 - PPFIBP1 chr12 27826700 + Exonic hg19 BRCA TCGA-A1-A0SK-01A 25 10 In-Frame Intra-chr p12.3 p11.23 Seq+ 69290 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIK3C3-TRPC6 PIK3C3 chr18 39573305 - TRPC6 chr11 101375529 - Exonic hg19 LUSC TCGA-37-4135-01A 10 4 Out-of-frame Inter-chr q12.3 q22.1 Seq+ 69291 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIK3CB-BFSP2 PIK3CB chr3 138452203 - BFSP2 chr3 133185672 + Exonic hg19 LUSC TCGA-66-2756-01A 128 96 In-Frame Intra-chr q22.3 Oncogene q22.1 Seq+ 69292 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIK3CB-COPB2 PIK3CB chr3 138478015 - COPB2 chr3 139102277 - Exonic hg19 BRCA TCGA-EW-A3E8-01B 3 4 In-Frame Intra-chr q22.3 Oncogene q23 Seq+ 69293 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIK3CB-ESYT3 PIK3CB chr3 138400809 - ESYT3 chr3 138176410 + Exonic hg19 CESC TCGA-MA-AA43-01A 2 1 Out-of-frame Intra-chr q22.3 Oncogene q22.3 69294 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIK3CB-GRM7 PIK3CB chr3 138474596 - GRM7 chr3 7620109 + Exonic hg19 LUAD TCGA-73-A9RS-01A 7 7 Out-of-frame Intra-chr q22.3 Oncogene p26.1 Seq+ 69295 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIK3CB-HHLA2 PIK3CB chr3 138478015 - HHLA2 chr3 108070635 + Exonic hg19 KIRP TCGA-G7-6793-01A 93 64 CDS-5'UTR Intra-chr q22.3 Oncogene q13.13 Seq+ 69296 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIK3CB-KCNAB1 PIK3CB chr3 138413628 - KCNAB1 chr3 156175242 + Exonic hg19 KIRC TCGA-B8-5163-01A 27 7 Out-of-frame Intra-chr q22.3 Oncogene q25.31 Seq+ 69297 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIK3CB-PCCB PIK3CB chr3 138515305 - PCCB chr3 136002679 + Exonic hg19 BRCA TCGA-EW-A3E8-01B 32 40 5'UTR-CDS Intra-chr q22.3 Oncogene q22.3 Seq+ 69298 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIK3CB-RASA2 PIK3CB chr3 138383878 - RASA2 chr3 141235170 + Exonic hg19 BRCA TCGA-AQ-A7U7-01A 5 1 In-Frame Intra-chr q22.3 Oncogene q23 Seq+ 69299 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIK3CB-SEMA5B PIK3CB chr3 138452203 - SEMA5B chr3 122667556 - Exonic hg19 KIRP TCGA-G7-6793-01A 32 26 Out-of-frame Intra-chr q22.3 Oncogene q21.1 Seq+ 69300 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIK3CB-TSPO PIK3CB chr3 138515305 - TSPO chr22 43555216 + Exonic hg19 BRCA TCGA-EW-A1OZ-01A 66 79 5'UTR-5'UTR Inter-chr q22.3 Oncogene q13.2 Seq+ 69301 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIK3R1-MRPL42 PIK3R1 chr5 67522837 - MRPL42 chr12 93862965 + Exonic hg19 PRAD TCGA-YL-A9WY-01A 12 3 5'UTR-5'UTR Inter-chr q13.1 Oncogene q22 Seq+ 69302 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIK3R1-NDUFB7 PIK3R1 chr5 67576834 - NDUFB7 chr19 14677745 - Exonic hg19 BRCA TCGA-B6-A1KF-01A 50 54 In-Frame Inter-chr q13.1 Oncogene p13.12 Seq+ 69303 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIK3R1-RP11-404L6.2 PIK3R1 chr5 67576834 - RP11-404L6.2 chr5 67492198 + Exonic hg19 LUSC TCGA-77-A5GH-01A 2 3 Out-of-frame Intra-chr q13.1 Oncogene 69304 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIK3R1-RP11-404L6.2 PIK3R1 chr5 67522837 - RP11-404L6.2 chr5 67492198 + Exonic hg19 LIHC TCGA-BW-A5NO-01A 2 3 Out-of-frame Intra-chr q13.1 Oncogene 69305 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIK3R3-LRRC41 PIK3R3 chr1 46543187 - LRRC41 chr1 46752171 - Exonic hg19 UCS TCGA-N9-A4Q8-01A 13 12 Out-of-frame Intra-chr p34.1 p33 Seq+ 69306 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIK3R3-LRRC41 PIK3R3 chr1 46527601 - LRRC41 chr1 46747057 - Exonic hg19 BRCA TCGA-OL-A5D7-01A 8 4 Out-of-frame Intra-chr p34.1 p33 Seq+ 69307 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIK3R3-MYO18A PIK3R3 chr1 46543187 - MYO18A chr17 27423933 - Exonic hg19 PRAD TCGA-ZG-A9M4-01A 2 6 Out-of-frame Inter-chr p34.1 q11.2 Oncogene Seq+ 69308 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIK3R3-ZSWIM5 PIK3R3 chr1 46597519 - ZSWIM5 chr1 45553909 - Exonic hg19 HNSC TCGA-CV-7414-01A 7 2 In-Frame Intra-chr p34.1 p34.1 Seq+ 69309 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIK3R4-ASTE1 PIK3R4 chr3 130447307 - ASTE1 chr3 130735183 - Exonic hg19 STAD TCGA-CG-4443-01A 5 8 In-Frame Intra-chr q22.1 Other:VPS15 q22.1 69310 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIK3R4-KALRN PIK3R4 chr3 130463330 - KALRN chr3 124113982 + Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 4 6 Out-of-frame Intra-chr q22.1 Other:VPS15 q21.1 Seq+ 69311 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIKFYVE-ZNF124 PIKFYVE chr2 209142432 - ZNF124 chr1 247323115 - Exonic hg19 LUSC TCGA-22-5474-01A 8 8 Out-of-frame Inter-chr q34 q44 Transcription factor Seq+ 69312 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PILRB-AP4M1 PILRB chr7 99936512 - AP4M1 chr7 99702863 + Exonic hg19 STAD TCGA-FP-8631-01A 10 49 5'UTR-CDS Intra-chr q22.1 q22.1 69313 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PILRB-IMMP2L PILRB chr7 99943591 - IMMP2L chr7 111161505 - Exonic hg19 LUAD TCGA-78-7154-01A 5 2 5'UTR-5'UTR Intra-chr q22.1 q31.1 69314 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PILRB-MAGI2 PILRB chr7 99954506 - MAGI2 chr7 77824380 - Exonic hg19 BRCA TCGA-A1-A0SN-01A 7 3 5'UTR-CDS Intra-chr q22.1 q21.11 Seq+ 69315 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIM3-CRELD2 PIM3 chr22 50355459 - CRELD2 chr22 50320903 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 41 23 In-Frame Intra-chr q13.33 CAMK:PIM q13.33 Seq+ 69316 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIN1-PPP2R3C PIN1 chr19 9960365 - PPP2R3C chr14 35585943 - Exonic hg19 ACC TCGA-OR-A5KV-01A 2 1 5'UTR-CDS Inter-chr p13.2 Tumor suppressor gene Transcription factor q13.2 69317 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PINX1-XKR6 PINX1 chr8 10677703 - XKR6 chr8 11052730 - Exonic hg19 LUSC TCGA-68-A59I-01A 3 1 Out-of-frame Intra-chr p23.1 Tumor suppressor gene p23.1 69318 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PION-STYXL1 PION chr7 77006165 - STYXL1 chr7 75634722 - Exonic hg19 GBM TCGA-06-0130-01A 2 3 In-Frame Intra-chr q11.23 Seq+ 69319 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIP4K2A-ABLIM1 PIP4K2A chr10 22880558 - ABLIM1 chr10 116361720 - Exonic hg19 KIRC TCGA-B0-4696-01A 3 1 Out-of-frame Intra-chr p12.2 q25.3 69320 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIP4K2A-ITFG1 PIP4K2A chr10 22839588 - ITFG1 chr16 47196575 - Exonic hg19 BLCA TCGA-XF-A8HC-01A 2 1 Out-of-frame Inter-chr p12.2 q12.1 69321 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIP4K2B-CWC25 PIP4K2B chr17 36933940 - CWC25 chr17 36963229 - Exonic hg19 STAD TCGA-BR-A4QI-01A 3 67 In-Frame Intra-chr q12 q12 Seq+ 69322 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIP4K2B-MED24 PIP4K2B chr17 36933940 - MED24 chr17 38188343 - Exonic hg19 BRCA TCGA-A7-A4SF-01A 141 53 In-Frame Intra-chr q12 q21.1 Seq+ 69323 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIP4K2B-SHANK2 PIP4K2B chr17 36933940 - SHANK2 chr11 70742672 - Exonic hg19 BRCA TCGA-AC-A2FB-01A 79 68 In-Frame Inter-chr q12 q13.4 Seq+ 69324 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIP4K2B-SLC6A4 PIP4K2B chr17 36943076 - SLC6A4 chr17 28549933 - Exonic hg19 BRCA TCGA-AC-A2FB-01A 7 5 CDS-3'UTR Intra-chr q12 q11.2 Seq+ 69325 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIP4K2B-TMEM132E PIP4K2B chr17 36955519 - TMEM132E chr17 32953146 + Exonic hg19 BRCA TCGA-BH-A0B7-01A 6 4 Out-of-frame Intra-chr q12 q12 Seq+ 69326 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIP4K2B-TMEM99 PIP4K2B chr17 36933940 - TMEM99 chr17 38989367 + Exonic hg19 BRCA TCGA-C8-A26W-01A 24 27 CDS-5'UTR Intra-chr q12 q21.2 Seq+ 69327 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIP5K1A-C1orf56 PIP5K1A chr1 151199876 - C1orf56 chr1 151022914 + Exonic hg19 LUAD TCGA-86-8673-01A 6 7 In-Frame Intra-chr q21.3 q21.3 Seq+ 69328 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIP5K1A-MLLT11 PIP5K1A chr1 151171557 - MLLT11 chr1 151039695 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 191 151 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 69329 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIP5K1A-SLC20A2 PIP5K1A chr1 151171557 - SLC20A2 chr8 42330172 - Exonic hg19 LUSC TCGA-66-2754-01A 6 1 CDS-5'UTR Inter-chr q21.3 p11.21 Seq+ 69330 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIP5K1A-TNFAIP8L2 PIP5K1A chr1 151171557 - TNFAIP8L2 chr1 151131142 + Exonic hg19 LUSC TCGA-39-5024-01A 3 4 CDS-5'UTR Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 69331 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIP5K1B-PGM5 PIP5K1B chr9 71437599 - PGM5 chr9 71080009 + Exonic hg19 UCEC TCGA-A5-A7WK-01A 29 26 Out-of-frame Intra-chr q21.11 q21.11 Seq+ 69332 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIP5K1B-PGM5 PIP5K1B chr9 71555706 - PGM5 chr9 71080009 + Exonic hg19 BRCA TCGA-AN-A0AL-01A 9 7 In-Frame Intra-chr q21.11 q21.11 Seq+ 69333 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIP5K1B-PGM5 PIP5K1B chr9 71491710 - PGM5 chr9 71094334 + Exonic hg19 ESCA TCGA-L5-A891-01A 3 18 Out-of-frame Intra-chr q21.11 q21.11 Seq+ 69334 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIP5K1C-C3 PIP5K1C chr19 3647336 - C3 chr19 6719414 - Exonic hg19 BRCA TCGA-E9-A1N8-01A 7 2 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 69335 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIP5K1C-MATK PIP5K1C chr19 3700295 - MATK chr19 3781670 - Exonic hg19 HNSC TCGA-CN-4741-01A 11 14 In-Frame Intra-chr p13.3 p13.3 Seq+ 69336 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIP5K1C-PALM PIP5K1C chr19 3660964 - PALM chr19 746285 + Exonic hg19 BRCA TCGA-OL-A5D7-01A 34 33 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 69337 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIP5K1C-PPM1H PIP5K1C chr19 3700295 - PPM1H chr12 63226059 - Exonic hg19 SARC TCGA-DX-A1KZ-01A 9 3 Out-of-frame Inter-chr p13.3 q14.2 Seq+ 69338 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIP5K1C-TJP3 PIP5K1C chr19 3700295 - TJP3 chr19 3728602 + Exonic hg19 LGG TCGA-HT-A61B-01A 2 2 Out-of-frame Intra-chr p13.3 p13.3 69339 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIR-TMEM27 PIR chrX 15509285 - TMEM27 chrX 15682518 - Exonic hg19 BLCA TCGA-GU-A42Q-01A 25 22 Out-of-frame Intra-chr p22.2 p22.2 Seq+ 69340 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PISD-PRR14L PISD chr22 32017635 - PRR14L chr22 32084213 - Exonic hg19 LUSC TCGA-56-8082-01A 16 10 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 69341 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PITPNA-LLGL2 PITPNA chr17 1451590 - LLGL2 chr17 73564557 + Exonic hg19 STAD TCGA-FP-8631-01A 7 27 In-Frame Intra-chr p13.3 q25.1 Seq+ 69342 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PITPNA-PRPF8 PITPNA chr17 1444860 - PRPF8 chr17 1565447 - Exonic hg19 OV TCGA-36-1581-01A 6 8 In-Frame Intra-chr p13.3 Seq+ 69343 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PITPNA-PRPF8 PITPNA chr17 1456298 - PRPF8 chr17 1557310 - Exonic hg19 LUSC TCGA-43-8116-01A 188 75 In-Frame Intra-chr p13.3 Seq+ 69344 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PITPNA-SLC43A2 PITPNA chr17 1442163 - SLC43A2 chr17 1520063 - Exonic hg19 KIRP TCGA-G7-6793-01A 8 3 Out-of-frame Intra-chr p13.3 Seq+ 69345 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PITPNB-C22orf25 PITPNB chr22 28254375 - C22orf25 chr22 20024283 + Exonic hg19 LUSC TCGA-L3-A524-01A 18 23 CDS-5'UTR Intra-chr q12.1 69346 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PITPNC1-IKZF3 PITPNC1 chr17 65374318 - IKZF3 chr17 37988404 - Exonic hg19 BRCA TCGA-3C-AALI-01A 7 7 Out-of-frame Intra-chr q24.2 q21.1 Tumor suppressor gene Transcription factor 69347 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PITPNC1-MARCH10 PITPNC1 chr17 65529066 - 2019_ 3_ 10_ chr17 60821889 - Exonic hg19 BRCA TCGA-C8-A1HI-01A 2 2 Out-of-frame Intra-chr q24.2 q23.2 69348 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PITPNC1-MBTD1 PITPNC1 chr17 65574373 - MBTD1 chr17 49302570 - Exonic hg19 BRCA TCGA-AR-A250-01A 5 6 CDS-5'UTR Intra-chr q24.2 q21.33 Seq+ 69349 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PITPNC1-SKAP1 PITPNC1 chr17 65374318 - SKAP1 chr17 46248021 - Exonic hg19 CESC TCGA-VS-A8EJ-01A 24 14 Out-of-frame Intra-chr q24.2 q21.32 Seq+ 69350 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PITPNM1-CABP2 PITPNM1 chr11 67267194 - CABP2 chr11 67287631 - Exonic hg19 BRCA TCGA-B6-A0RT-01A 12 5 In-Frame Intra-chr q13.2 q13.2 Seq+ 69351 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PITPNM1-NUMA1 PITPNM1 chr11 67271574 - NUMA1 chr11 71747021 - Exonic hg19 BRCA TCGA-AC-A4ZE-01A 2 2 CDS-5'UTR Intra-chr q13.2 q13.4 Oncogene 69352 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PITPNM2-ARHGEF25 PITPNM2 chr12 123634323 - ARHGEF25 chr12 58007047 + Exonic hg19 SARC TCGA-DX-A3LS-01A 88 10 5'UTR-5'UTR Intra-chr q24.31 q13.3 Seq+ 69353 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PITPNM2-KCTD3 PITPNM2 chr12 123519060 - KCTD3 chr1 215792228 + Exonic hg19 LUSC TCGA-98-8021-01A 2 1 Out-of-frame Inter-chr q24.31 q41 Seq+ 69354 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PITPNM2-MPHOSPH9 PITPNM2 chr12 123477046 - MPHOSPH9 chr12 123687922 - Exonic hg19 UCS TCGA-N6-A4VG-01A 2 2 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 69355 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PITPNM2-PGD PITPNM2 chr12 123594932 - PGD chr1 10459686 + Exonic hg19 COAD TCGA-A6-5664-01A 3 7 5'UTR-CDS Inter-chr q24.31 p36.22 Seq+ 69356 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PITPNM2-UBE3B PITPNM2 chr12 123519060 - UBE3B chr12 109935623 + Exonic hg19 MESO TCGA-TS-A7P7-01A 3 6 Out-of-frame Intra-chr q24.31 q24.11 Seq+ 69357 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PITPNM3-P2RX5 PITPNM3 chr17 6371545 - P2RX5 chr17 3595088 - Exonic hg19 CHOL TCGA-W5-AA31-01A 16 4 Out-of-frame Intra-chr p13.1 p13.2 Seq+ 69358 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PITPNM3-STX8 PITPNM3 chr17 6406847 - STX8 chr17 9281970 - Exonic hg19 KIRC TCGA-BP-4983-01A 19 12 In-Frame Intra-chr p13.1 p13.1 Seq+ 69359 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PITX1-P4HA2 PITX1 chr5 134369403 - P4HA2 chr5 131554337 - Exonic hg19 HNSC TCGA-DQ-7590-01A 18 14 CDS-5'UTR Intra-chr q31.1 Transcription factor q31.1 Seq+ 69360 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PIWIL4-THRSP PIWIL4 chr11 94301974 - THRSP chr11 77778705 + Exonic hg19 SARC TCGA-DX-A3LT-01A 5 2 CDS-3'UTR Intra-chr q21 q14.1 Seq+ 69361 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PJA2-GPR98 PJA2 chr5 108745543 - GPR98 chr5 90445847 + Exonic hg19 LUSC TCGA-56-6545-01A 151 484 5'UTR-5'UTR Intra-chr q21.3 Seq+ 69362 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKHD1-CAGE1 PKHD1 chr6 51875107 - CAGE1 chr6 7334323 - Exonic hg19 PRAD TCGA-EJ-7782-01A 3 1 Out-of-frame Intra-chr p12.2 Oncogene p24.3 Seq+ 69363 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKHD1-RCAN2 PKHD1 chr6 51695659 - RCAN2 chr6 46216633 - Exonic hg19 KIRC TCGA-A3-3313-01A 58 33 Out-of-frame Intra-chr p12.2 Oncogene p12.3 Seq+ 69364 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKIB-BLK PKIB chr6 122954512 - BLK chr8 11418811 + Exonic hg19 ACC TCGA-OR-A5JY-01A 10 1 5'UTR-CDS Inter-chr q22.31 p23.1 TK:Src Seq+ 69365 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKIB-SLC35F1 PKIB chr6 122954512 - SLC35F1 chr6 118556672 + Exonic hg19 BRCA TCGA-A8-A06R-01A 9 26 5'UTR-CDS Intra-chr q22.31 q22.2 69366 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKIG-C2orf53 PKIG chr20 43160619 - C2orf53 chr2 27361890 - Exonic hg19 STAD TCGA-BR-A452-01A 2 2 5'UTR-5'UTR Inter-chr q13.12 69367 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKM2-ACPP PKM2 chr15 72491370 - ACPP chr3 132036250 + Exonic hg19 PRAD TCGA-G9-6367-01A 2 1 3'UTR-5'UTR Inter-chr q22.1 69368 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKM2-CLCN3 PKM2 chr15 72491373 - CLCN3 chr4 170623929 + Exonic hg19 COAD TCGA-A6-6648-01A 2 15 Out-of-frame Inter-chr q33 69369 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKM2-ERBB3 PKM2 chr15 72491373 - ERBB3 chr12 56492035 + Exonic hg19 LGG TCGA-HT-7467-01A 2 19 Out-of-frame Inter-chr q13.2 Oncogene 69370 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKM2-FOXP1 PKM2 chr15 72491373 - FOXP1 chr3 71007472 - Exonic hg19 CESC TCGA-EK-A2RO-01A 2 88 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor 69371 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKM2-FOXP1 PKM2 chr15 72491373 - FOXP1 chr3 71007472 - Exonic hg19 CESC TCGA-ZJ-AAXT-01A 2 56 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor 69372 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKM2-PTN PKM2 chr15 72491370 - PTN chr7 136938384 - Exonic hg19 THCA TCGA-ET-A25G-01A 2 3 3'UTR-CDS Inter-chr q33 69373 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKM2-SLC1A3 PKM2 chr15 72491373 - SLC1A3 chr5 36606541 + Exonic hg19 LGG TCGA-DU-8161-01A 2 1 Out-of-frame Inter-chr p13.2 69374 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKM2-TNNT1 PKM2 chr15 72491370 - TNNT1 chr19 55646910 - Exonic hg19 LUSC TCGA-33-4586-01A 2 8 3'UTR-CDS Inter-chr q13.42 69375 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKM2-USP7 PKM2 chr15 72491373 - USP7 chr16 9030586 - Exonic hg19 PRAD TCGA-HC-7742-01A 2 7 Out-of-frame Inter-chr p13.2 69376 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKMYT1-CLDN6 PKMYT1 chr16 3029649 - CLDN6 chr16 3068485 - Exonic hg19 BRCA TCGA-A7-A4SE-01A 53 25 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 69377 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKMYT1-CLDN6 PKMYT1 chr16 3026665 - CLDN6 chr16 3066043 - Exonic hg19 KIRP TCGA-BQ-5890-01A 21 15 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 69378 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKN1-ANXA4 PKN1 chr19 14574965 - ANXA4 chr2 70015186 + Exonic hg19 LIHC TCGA-BC-4072-01B 72 31 CDS-5'UTR Inter-chr p13.12 AGC:PKN p13.3 Seq+ 69379 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKN1-LDLR PKN1 chr19 14557373 - LDLR chr19 11226770 + Exonic hg19 BRCA TCGA-C8-A26W-01A 13 8 Out-of-frame Intra-chr p13.12 AGC:PKN p13.2 Seq+ 69380 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKN2-COL24A1 PKN2 chr1 89150311 - COL24A1 chr1 86453337 - Exonic hg19 BRCA TCGA-AN-A0FV-01A 2 2 In-Frame Intra-chr p22.2 AGC:PKN p22.3 Seq+ 69381 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKNOX1-H2BFM PKNOX1 chr21 44394774 - H2BFM chrX 103295395 + Exonic hg19 KIRC TCGA-CJ-5681-01A 4 7 5'UTR-CDS Inter-chr q22.3 Tumor suppressor gene Transcription factor q22.2 Seq+ 69382 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKNOX1-PDE9A PKNOX1 chr21 44394774 - PDE9A chr21 44174100 + Exonic hg19 BLCA TCGA-2F-A9KP-01A 3 1 5'UTR-CDS Intra-chr q22.3 Tumor suppressor gene Transcription factor q22.3 Seq+ 69383 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKP1-CLCN3 PKP1 chr1 201302121 - CLCN3 chr4 170623929 + Exonic hg19 LUSC TCGA-56-7582-01A 2 2 Out-of-frame Inter-chr q32.1 q33 69384 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKP2-AC013461.1 PKP2 chr12 33021861 - AC013461.1 chr2 174068524 + Exonic hg19 BLCA TCGA-G2-AA3F-01A 4 6 Out-of-frame Inter-chr p11.21 69385 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKP2-DNM1L PKP2 chr12 32993962 - DNM1L chr12 32895523 + Exonic hg19 BRCA TCGA-EW-A6SD-01A 35 27 In-Frame Intra-chr p11.21 p11.21 Seq+ 69386 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKP2-MRPS35 PKP2 chr12 32949043 - MRPS35 chr12 27888380 + Exonic hg19 PAAD TCGA-IB-A6UF-01A 6 5 Out-of-frame Intra-chr p11.21 p11.22 Seq+ 69387 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKP3-KRT1 PKP3 chr11 404681 - KRT1 chr12 53074191 - Exonic hg19 HNSC TCGA-CQ-A4CE-01A 2 2 3'UTR-5'UTR Inter-chr p15.5 q13.13 69388 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PKP4-PDE1A PKP4 chr2 159459616 - PDE1A chr2 183011879 - Exonic hg19 OV TCGA-23-2081-01A 12 28 In-Frame Intra-chr q24.1 q32.1 Seq+ 69389 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLA2G16-SGPP2 PLA2G16 chr11 63357572 - SGPP2 chr2 223339287 + Exonic hg19 LGG TCGA-TM-A84B-01A 14 3 In-Frame Inter-chr q13.1 Tumor suppressor gene q36.1 Seq+ 69390 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLA2G2A-CLCN3 PLA2G2A chr1 20301925 - CLCN3 chr4 170623929 + Exonic hg19 PRAD TCGA-EJ-5527-01A 2 10 Out-of-frame Inter-chr p36.13 Tumor suppressor gene q33 69391 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLA2G2A-FBLN1 PLA2G2A chr1 20301931 - FBLN1 chr22 45914462 + Exonic hg19 PRAD TCGA-KK-A7AQ-01A 2 1 Out-of-frame Inter-chr p36.13 Tumor suppressor gene q13.31 Tumor suppressor gene 69392 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLA2G2A-ITGA6 PLA2G2A chr1 20301931 - ITGA6 chr2 173351992 + Exonic hg19 PRAD TCGA-G9-6348-01A 2 12 3'UTR-CDS Inter-chr p36.13 Tumor suppressor gene q31.1 69393 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLA2G2A-MBTPS1 PLA2G2A chr1 20301931 - MBTPS1 chr16 84103643 - Exonic hg19 PRAD TCGA-G9-7525-01A 2 861 3'UTR-CDS Inter-chr p36.13 Tumor suppressor gene q24.1 69394 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLA2G2A-PLAT PLA2G2A chr1 20301925 - PLAT chr8 42051245 - Exonic hg19 PRAD TCGA-YL-A9WH-01A 2 45 Out-of-frame Inter-chr p36.13 Tumor suppressor gene p11.21 69395 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLA2G2A-TAF15 PLA2G2A chr1 20301931 - TAF15 chr17 34147336 + Exonic hg19 PRAD TCGA-CH-5766-01A 2 4 3'UTR-CDS Inter-chr p36.13 Tumor suppressor gene q12 69396 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLA2G6-TMEM184B PLA2G6 chr22 38565225 - TMEM184B chr22 38622877 - Exonic hg19 BRCA TCGA-E2-A1L7-01A 2 3 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 69397 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLA2G6-TMEM184B PLA2G6 chr22 38577791 - TMEM184B chr22 38627340 - Exonic hg19 SKCM TCGA-FS-A4F4-06A 3 11 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 69398 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLA2R1-ITGB6 PLA2R1 chr2 160832579 - ITGB6 chr2 160998582 - Exonic hg19 HNSC TCGA-CR-7370-01A 104 58 In-Frame Intra-chr q24.2 Tumor suppressor gene q24.2 Seq+ 69399 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLAA-PTPLAD2 PLAA chr9 26946895 - PTPLAD2 chr9 21029397 - Exonic hg19 LUAD TCGA-93-A4JQ-01A 67 22 In-Frame Intra-chr p21.2 Tumor suppressor gene Seq+ 69400 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLAC1-DSCAM PLAC1 chrX 133736081 - DSCAM chr21 41561165 - Exonic hg19 KIRC TCGA-CJ-5681-01A 9 12 5'UTR-CDS Inter-chr q26.3 q22.2 Seq+ 69401 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLAGL1-BAI3 PLAGL1 chr6 144290044 - BAI3 chr6 70034764 + Exonic hg19 BLCA TCGA-GV-A40E-01A 5 1 5'UTR-CDS Intra-chr q24.2 Tumor suppressor gene Transcription factor 69402 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLAT-AC011333.1 PLAT chr8 42032755 - AC011333.1 chr5 173473096 + Exonic hg19 BRCA TCGA-BH-A0HL-01A 2 13 Out-of-frame Inter-chr p11.21 q35.2 69403 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLAT-C12orf66 PLAT chr8 42065012 - C12orf66 chr12 64609743 - Exonic hg19 SKCM TCGA-EB-A4IQ-01A 63 120 5'UTR-CDS Inter-chr p11.21 q14.2 Seq+ 69404 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLAT-SUPT16H PLAT chr8 42032755 - SUPT16H chr14 21829491 - Exonic hg19 HNSC TCGA-DQ-7589-01A 2 35 Out-of-frame Inter-chr p11.21 q11.2 69405 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLAU-ZMAT2 PLAU chr10 75677254 - ZMAT2 chr5 140080404 + Exonic hg19 SKCM TCGA-EE-A2M5-06A 2 9 3'UTR-CDS Inter-chr q22.2 q31.3 69406 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLAUR-MARK4 PLAUR chr19 44174218 - MARK4 chr19 45762247 + Exonic hg19 LAML TCGA-AB-3007-03A 3 1 Out-of-frame Intra-chr q13.31 q13.32 CAMK:CAMKL Oncogene 69407 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLAUR-SMG9 PLAUR chr19 44171733 - SMG9 chr19 44254899 - Exonic hg19 CESC TCGA-VS-A8Q8-01A 27 12 CDS-5'UTR Intra-chr q13.31 q13.31 Seq+ 69408 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLAUR-WDR45 PLAUR chr19 44169468 - WDR45 chrX 48935771 - Exonic hg19 SARC TCGA-FX-A3TO-01A 49 7 CDS-5'UTR Inter-chr q13.31 p11.23 Seq+ 69409 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLAUR-ZNF576 PLAUR chr19 44169468 - ZNF576 chr19 44102983 + Exonic hg19 LUAD TCGA-NJ-A4YQ-01A 4 2 In-Frame Intra-chr q13.31 q13.31 Transcription factor Seq+ 69410 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLB1-CAB39 PLB1 chr2 28742630 - CAB39 chr2 231678764 + Exonic hg19 PRAD TCGA-TK-A8OK-01A 2 3 In-Frame Intra-chr p23.2 q37.1 69411 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLBD1-CREBL2 PLBD1 chr12 14688593 - CREBL2 chr12 12788711 + Exonic hg19 BLCA TCGA-BT-A20T-01A 5 4 Out-of-frame Intra-chr p13.1 p13.1 Transcription factor 69412 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLBD2-CIDEC PLBD2 chr12 113796695 - CIDEC chr3 9920195 - Exonic hg19 ACC TCGA-OR-A5L6-01A 56 54 In-Frame Inter-chr q24.13 p25.3 Seq+ 69413 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLBD2-FBXO21 PLBD2 chr12 113796695 - FBXO21 chr12 117615446 - Exonic hg19 SKCM TCGA-D3-A3BZ-06A 2 2 In-Frame Intra-chr q24.13 q24.22 69414 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLCB1-GPCPD1 PLCB1 chr20 8131018 - GPCPD1 chr20 5585086 - Exonic hg19 BRCA TCGA-BH-A203-01A 6 3 CDS-5'UTR Intra-chr p12.3 p12.3 Seq+ 69415 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLCB1-MCM8 PLCB1 chr20 8703068 - MCM8 chr20 5937772 + Exonic hg19 LUSC TCGA-22-A5C4-01A 27 17 In-Frame Intra-chr p12.3 p12.3 Seq+ 69416 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLCB1-RBL1 PLCB1 chr20 8131018 - RBL1 chr20 35651229 - Exonic hg19 LUSC TCGA-22-A5C4-01A 10 10 In-Frame Intra-chr p12.3 q11.23 Tumor suppressor gene Seq+ 69417 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLCB1-WTIP PLCB1 chr20 8737825 - WTIP chr19 34981281 + Exonic hg19 ACC TCGA-OU-A5PI-01A 6 2 In-Frame Inter-chr p12.3 q13.11 Seq+ 69418 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLCB2-MAPKBP1 PLCB2 chr15 40581473 - MAPKBP1 chr15 42092021 + Exonic hg19 MESO TCGA-3H-AB3M-01A 5 8 In-Frame Intra-chr q15.1 q15.1 69419 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLCB3-BAD PLCB3 chr11 64027706 - BAD chr11 64039275 - Exonic hg19 BRCA TCGA-A8-A06R-01A 3 6 Out-of-frame Intra-chr q13.1 Tumor suppressor gene q13.1 Seq+ 69420 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLCB4-BMP2 PLCB4 chr20 9049550 - BMP2 chr20 6750767 + Exonic hg19 BRCA TCGA-BH-A1FH-01A 4 1 5'UTR-3'UTR Intra-chr p12.3 p12.3 Tumor suppressor gene Seq+ 69421 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLCB4-MACROD2 PLCB4 chr20 9288545 - MACROD2 chr20 15843390 + Exonic hg19 UCEC TCGA-PG-A7D5-01A 3 3 In-Frame Intra-chr p12.3 p12.1 Seq+ 69422 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLCB4-RASA3 PLCB4 chr20 9424890 - RASA3 chr13 114762215 - Exonic hg19 READ TCGA-G5-6641-01A 4 4 In-Frame Inter-chr p12.3 Seq+ 69423 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLCD4-VIL1 PLCD4 chr2 219487601 - VIL1 chr2 219313946 + Exonic hg19 BRCA TCGA-E2-A1LE-01A 2 7 Out-of-frame Intra-chr q35 q35 Tumor suppressor gene Seq+ 69424 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLCE1-SH3PXD2A PLCE1 chr10 95792009 - SH3PXD2A chr10 105365674 - Exonic hg19 COAD TCGA-G4-6314-01A 3 1 In-Frame Intra-chr q23.33 Tumor suppressor gene q24.33 69425 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLCG1-BPIFB1 PLCG1 chr20 39766498 - BPIFB1 chr20 31873839 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 20 10 CDS-5'UTR Intra-chr q12 Oncogene q11.21 Seq+ 69426 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLCG1-EYA2 PLCG1 chr20 39798909 - EYA2 chr20 45797787 + Exonic hg19 STAD TCGA-VQ-A8PH-01A 4 56 In-Frame Intra-chr q12 Oncogene q13.12 Seq+ 69427 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLCG1-TAF4 PLCG1 chr20 39766498 - TAF4 chr20 60584230 - Exonic hg19 BRCA TCGA-EW-A2FW-01A 8 7 Out-of-frame Intra-chr q12 Oncogene Seq+ 69428 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLCG2-WWOX PLCG2 chr16 81904540 - WWOX chr16 79245505 + Exonic hg19 LUAD TCGA-NJ-A4YF-01A 3 2 In-Frame Intra-chr q23.3 q23.1 Tumor suppressor gene Seq+ 69429 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLCH1-C3orf33 PLCH1 chr3 155462629 - C3orf33 chr3 155520380 - Exonic hg19 LUAD TCGA-55-8506-01A 5 9 5'UTR-5'UTR Intra-chr q25.31 q25.31 69430 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLCH1-MUC13 PLCH1 chr3 155282704 - MUC13 chr3 124625589 - Exonic hg19 BLCA TCGA-DK-A6B2-01A 2 3 CDS-3'UTR Intra-chr q25.31 q21.2 69431 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLCH1-SKIL PLCH1 chr3 155421935 - SKIL chr3 170077487 + Exonic hg19 BRCA TCGA-BH-A1F0-01A 2 4 5'UTR-5'UTR Intra-chr q25.31 q26.2 Tumor suppressor gene Transcription factor Seq+ 69432 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLCL2-TSEN2 PLCL2 chr3 16926865 - TSEN2 chr3 12558110 + Exonic hg19 LIHC TCGA-KR-A7K8-01A 13 7 Out-of-frame Intra-chr p25.2 Seq+ 69433 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLCXD2-CD96 PLCXD2 chr3 111451550 - CD96 chr3 111342601 + Exonic hg19 UCS TCGA-N8-A56S-01A 6 1 3'UTR-CDS Intra-chr q13.2 q13.13 Seq+ 69434 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLD1-FNDC3B PLD1 chr3 171528189 - FNDC3B chr3 171830242 + Exonic hg19 LUSC TCGA-63-A5MP-01A 2 1 5'UTR-5'UTR Intra-chr q26.31 Tumor suppressor gene q26.31 69435 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLD1-LMBR1 PLD1 chr3 171488985 - LMBR1 chr7 156629579 - Exonic hg19 PRAD TCGA-Y6-A9XI-01A 10 6 5'UTR-CDS Inter-chr q26.31 Tumor suppressor gene q36.3 Seq+ 69436 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLD1-SLC7A14 PLD1 chr3 171338176 - SLC7A14 chr3 170219134 - Exonic hg19 STAD TCGA-VQ-AA6B-01A 4 118 In-Frame Intra-chr q26.31 Tumor suppressor gene q26.2 Seq+ 69437 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLD2-ZZEF1 PLD2 chr17 4712846 - ZZEF1 chr17 4009103 - Exonic hg19 BRCA TCGA-BH-A1ES-06A 3 2 In-Frame Intra-chr p13.2 p13.2 Seq+ 69438 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLD3-NCALD PLD3 chr19 40884390 - NCALD chr8 102813898 - Exonic hg19 KIRC TCGA-A3-3374-01A 2 16 Out-of-frame Inter-chr q13.2 q22.3 69439 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLD3-SIRT2 PLD3 chr19 40854675 - SIRT2 chr19 39384507 - Exonic hg19 BRCA TCGA-E9-A248-01A 9 10 5'UTR-5'UTR Intra-chr q13.2 Tumor suppressor gene Seq+ 69440 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLD3-TYK2 PLD3 chr19 40884390 - TYK2 chr19 10491352 - Exonic hg19 BLCA TCGA-FD-A3SR-01A 2 19 Out-of-frame Intra-chr q13.2 p13.2 TK:JakA 69441 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLD5-PLA2R1 PLD5 chr1 242687390 - PLA2R1 chr2 160808089 - Exonic hg19 SKCM TCGA-ER-A197-06A 14 12 Out-of-frame Inter-chr q43 q24.2 Tumor suppressor gene Seq+ 69442 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLDN-SCMH1 PLDN chr15 45884474 - SCMH1 chr1 41514562 - Exonic hg19 PRAD TCGA-V1-A9O9-01A 16 13 Out-of-frame Inter-chr p34.2 Transcription factor Seq+ 69443 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEC-EIF2AK2 PLEC chr8 144989321 - EIF2AK2 chr2 37342384 - Exonic hg19 LUAD TCGA-97-7552-01A 2 5 3'UTR-CDS Inter-chr q24.3 p22.2 69444 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEC-JPH1 PLEC chr8 145012319 - JPH1 chr8 75171738 - Exonic hg19 SARC TCGA-DX-AB2E-01A 8 9 Out-of-frame Intra-chr q24.3 q21.11 Seq+ 69445 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEC-KSR1 PLEC chr8 145049345 - KSR1 chr17 25877594 + Exonic hg19 BRCA TCGA-AC-A5XU-01A 2 1 CDS-5'UTR Inter-chr q24.3 q11.2 TKL:RAF 69446 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEC-NDUFV1 PLEC chr8 144989321 - NDUFV1 chr11 67375697 + Exonic hg19 COAD TCGA-AU-6004-01A 2 14 3'UTR-CDS Inter-chr q24.3 q13.2 69447 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEK2-TMEM229B PLEK2 chr14 67878735 - TMEM229B chr14 67940658 - Exonic hg19 STAD TCGA-BR-7901-01A 2 11 CDS-5'UTR Intra-chr q24.1 q24.1 Seq+ 69448 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHA1-BTBD16 PLEKHA1 chr10 124159904 - BTBD16 chr10 124049424 + Exonic hg19 LUSC TCGA-33-AASJ-01A 39 23 In-Frame Intra-chr q26.13 q26.13 Seq+ 69449 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHA1-CYP2C19 PLEKHA1 chr10 124159904 - CYP2C19 chr10 96602594 + Exonic hg19 ESCA TCGA-L5-A88Y-01A 9 30 In-Frame Intra-chr q26.13 q23.33 Oncogene Seq+ 69450 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHA1-FAM187B PLEKHA1 chr10 124134322 - FAM187B chr19 35716115 - Exonic hg19 BRCA TCGA-AO-A03V-01A 2 28 5'UTR-CDS Inter-chr q26.13 q13.12 Seq+ 69451 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHA2-IDO2 PLEKHA2 chr8 38793568 - IDO2 chr8 39847240 + Exonic hg19 PAAD TCGA-LB-A9Q5-01A 2 1 In-Frame Intra-chr p11.22 p11.21 69452 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHA2-KCNU1 PLEKHA2 chr8 38759410 - KCNU1 chr8 36793033 + Exonic hg19 BRCA TCGA-C8-A12X-01A 3 5 5'UTR-CDS Intra-chr p11.22 p11.23 Seq+ 69453 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHA2-KCNU1 PLEKHA2 chr8 38814904 - KCNU1 chr8 36663787 + Exonic hg19 UCEC TCGA-K6-A3WQ-01A 14 9 In-Frame Intra-chr p11.22 p11.23 Seq+ 69454 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHA2-SHANK2 PLEKHA2 chr8 38775588 - SHANK2 chr11 70349036 - Exonic hg19 BRCA TCGA-D8-A1XF-01A 4 3 In-Frame Inter-chr p11.22 q13.4 Seq+ 69455 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHA3-MTX2 PLEKHA3 chr2 179345636 - MTX2 chr2 177161588 + Exonic hg19 PRAD TCGA-KK-A8ID-01A 2 7 In-Frame Intra-chr q31.2 q31.1 69456 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHA5-ACRBP PLEKHA5 chr12 19285384 - ACRBP chr12 6754503 - Exonic hg19 PAAD TCGA-HZ-8002-01A 3 3 Out-of-frame Intra-chr p12.3 p13.31 Seq+ 69457 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHA5-FGF6 PLEKHA5 chr12 19283064 - FGF6 chr12 4553402 - Exonic hg19 COAD TCGA-NH-A50U-01A 34 3 In-Frame Intra-chr p12.3 p13.32 Seq+ 69458 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHA5-GPC6 PLEKHA5 chr12 19285384 - GPC6 chr13 94938603 + Exonic hg19 BRCA TCGA-E2-A14R-01A 2 2 Out-of-frame Inter-chr p12.3 q31.3 Seq+ 69459 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHA5-PIK3C2G PLEKHA5 chr12 19489550 - PIK3C2G chr12 18715637 + Exonic hg19 BLCA TCGA-XF-AAMX-01A 4 4 Out-of-frame Intra-chr p12.3 p12.3 Seq+ 69460 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHA5-RASGEF1C PLEKHA5 chr12 19285384 - RASGEF1C chr5 179565058 - Exonic hg19 LIHC TCGA-BC-A216-01A 11 1 5'UTR-5'UTR Inter-chr p12.3 q35.3 Seq+ 69461 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHA5-RERGL PLEKHA5 chr12 19285384 - RERGL chr12 18241890 - Exonic hg19 STAD TCGA-BR-A4PF-01A 3 71 Out-of-frame Intra-chr p12.3 p12.3 Seq+ 69462 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHA5-UHRF1 PLEKHA5 chr12 19422819 - UHRF1 chr19 4941540 + Exonic hg19 SARC TCGA-DX-A48N-01A 8 2 Out-of-frame Inter-chr p12.3 p13.3 Seq+ 69463 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHA6-DCAF5 PLEKHA6 chr1 204234070 - DCAF5 chr14 69542128 - Exonic hg19 LGG TCGA-DU-6403-01A 2 2 In-Frame Inter-chr q32.1 q24.1 69464 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHA6-LRRN2 PLEKHA6 chr1 204328822 - LRRN2 chr1 204589346 - Exonic hg19 LGG TCGA-FG-A4MW-01A 20 95 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 69465 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHA7-ABCC8 PLEKHA7 chr11 17035536 - ABCC8 chr11 17485151 - Exonic hg19 LGG TCGA-DB-A4XH-01A 2 1 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 69466 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHA7-AP2A2 PLEKHA7 chr11 16834660 - AP2A2 chr11 959437 + Exonic hg19 BRCA TCGA-E2-A1IO-01A 2 2 Out-of-frame Intra-chr p15.1 p15.5 69467 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHA7-MMP9 PLEKHA7 chr11 16872738 - MMP9 chr20 44638505 + Exonic hg19 PRAD TCGA-EJ-7785-01A 6 2 In-Frame Inter-chr p15.1 q13.12 Seq+ 69468 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHA7-SERGEF PLEKHA7 chr11 17035536 - SERGEF chr11 17809960 - Exonic hg19 BLCA TCGA-CF-A3MH-01A 20 17 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 69469 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHA7-SMPD1 PLEKHA7 chr11 17035536 - SMPD1 chr11 6414446 + Exonic hg19 BRCA TCGA-AR-A24K-01A 4 9 In-Frame Intra-chr p15.1 p15.4 Seq+ 69470 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHA7-TRIM21 PLEKHA7 chr11 17035536 - TRIM21 chr11 4411688 - Exonic hg19 BLCA TCGA-FD-A43N-01A 10 7 CDS-5'UTR Intra-chr p15.1 p15.4 Seq+ 69471 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHA7-USH1C PLEKHA7 chr11 17035536 - USH1C chr11 17523527 - Exonic hg19 ESCA TCGA-L5-A8NE-01A 3 27 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 69472 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHB1-PACS1 PLEKHB1 chr11 73362935 - PACS1 chr11 65960957 + Exonic hg19 BRCA TCGA-PE-A5DC-01A 4 5 In-Frame Intra-chr q13.4 q13.1 Seq+ 69473 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHB2-FAM168B PLEKHB2 chr2 131862971 - FAM168B chr2 131840230 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 11 18 5'UTR-5'UTR Intra-chr q21.1 q21.1 Seq+ 69474 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHB2-GABRR1 PLEKHB2 chr2 131862971 - GABRR1 chr6 89910984 - Exonic hg19 SARC TCGA-DX-A1KZ-01A 19 33 5'UTR-5'UTR Inter-chr q21.1 q15 Seq+ 69475 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHF1-C19orf12 PLEKHF1 chr19 30156412 - C19orf12 chr19 30199330 - Exonic hg19 STAD TCGA-BR-8060-01A 2 45 5'UTR-5'UTR Intra-chr q12 q12 Seq+ 69476 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHF2-C8orf38 PLEKHF2 chr8 96146258 - C8orf38 chr8 96053798 + Exonic hg19 BRCA TCGA-BH-A0C0-01A 60 55 5'UTR-CDS Intra-chr q22.1 Seq+ 69477 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHF2-C8orf38 PLEKHF2 chr8 96146258 - C8orf38 chr8 96044223 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 301 164 5'UTR-CDS Intra-chr q22.1 Seq+ 69478 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHF2-TP53INP1 PLEKHF2 chr8 96146258 - TP53INP1 chr8 95953319 - Exonic hg19 LUAD TCGA-86-7953-01A 3 2 5'UTR-5'UTR Intra-chr q22.1 q22.1 Tumor suppressor gene 69479 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHG1-GJA1 PLEKHG1 chr6 151089874 - GJA1 chr6 121767978 + Exonic hg19 MESO TCGA-SC-A6LM-01A 9 8 CDS-5'UTR Intra-chr q25.1 q22.31 Tumor suppressor gene Seq+ 69480 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHG3-MTHFD1 PLEKHG3 chr14 65199619 - MTHFD1 chr14 64924932 + Exonic hg19 BLCA TCGA-LT-A5Z6-01A 8 4 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 69481 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHG4B-MELK PLEKHG4B chr5 151714 - MELK chr9 36674831 + Exonic hg19 UCEC TCGA-KP-A3VZ-01A 39 3 In-Frame Inter-chr p15.33 p13.2 CAMK:CAMKL Seq+ 69482 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHG5-KHDRBS1 PLEKHG5 chr1 6579505 - KHDRBS1 chr1 32495899 + Exonic hg19 ESCA TCGA-JY-A6FH-01A 7 16 In-Frame Intra-chr p36.31 Oncogene p35.2 Seq+ 69483 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHG5-TNFRSF8 PLEKHG5 chr1 6556553 - TNFRSF8 chr1 12198286 + Exonic hg19 LUAD TCGA-MP-A4SW-01A 7 3 CDS-5'UTR Intra-chr p36.31 Oncogene p36.22 Seq+ 69484 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHG6-TMBIM1 PLEKHG6 chr12 6428274 - TMBIM1 chr2 219146904 - Exonic hg19 READ TCGA-AG-3732-01A 24 9 CDS-5'UTR Inter-chr p13.31 q35 Seq+ 69485 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHH1-GPHN PLEKHH1 chr14 68028752 - GPHN chr14 67525366 + Exonic hg19 BLCA TCGA-K4-A3WV-01A 10 7 In-Frame Intra-chr q24.1 q23.3 Seq+ 69486 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHH1-MPP5 PLEKHH1 chr14 68035933 - MPP5 chr14 67759228 + Exonic hg19 BLCA TCGA-2F-A9KW-01A 5 1 In-Frame Intra-chr q24.1 q23.3 Seq+ 69487 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHH1-MPP5 PLEKHH1 chr14 68008710 - MPP5 chr14 67759228 + Exonic hg19 STAD TCGA-BR-8373-01A 2 16 Out-of-frame Intra-chr q24.1 q23.3 Seq+ 69488 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHH1-ZFYVE26 PLEKHH1 chr14 68000115 - ZFYVE26 chr14 68221967 - Exonic hg19 STAD TCGA-BR-4357-01A 2 1 5'UTR-CDS Intra-chr q24.1 q24.1 69489 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHH2-VSNL1 PLEKHH2 chr2 43871935 - VSNL1 chr2 17773337 + Exonic hg19 PRAD TCGA-HC-8262-01A 7 2 CDS-5'UTR Intra-chr p21 p24.2 Tumor suppressor gene Seq+ 69490 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHM2-IGF2BP2 PLEKHM2 chr1 16046415 - IGF2BP2 chr3 185410550 - Exonic hg19 ESCA TCGA-R6-A6Y2-01B 11 61 In-Frame Inter-chr p36.21 q27.2 Seq+ 69491 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHM2-TMEM51 PLEKHM2 chr1 16046415 - TMEM51 chr1 15536986 + Exonic hg19 GBM TCGA-12-3650-01A 9 27 CDS-5'UTR Intra-chr p36.21 p36.21 Seq+ 69492 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHM2-ZSWIM5 PLEKHM2 chr1 16011113 - ZSWIM5 chr1 45553909 - Exonic hg19 BRCA TCGA-AC-A2FO-01A 8 14 Out-of-frame Intra-chr p36.21 p34.1 Seq+ 69493 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHM3-MAP2 PLEKHM3 chr2 208890113 - MAP2 chr2 210489777 + Exonic hg19 COAD TCGA-DM-A1D0-01A 7 2 5'UTR-5'UTR Intra-chr q33.3 q34 Seq+ 69494 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLEKHN1-KLHL17 PLEKHN1 chr1 902183 - KLHL17 chr1 900343 + Exonic hg19 CESC TCGA-C5-A8ZZ-01A 2 3 Out-of-frame Intra-chr p36.33 p36.33 69495 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLIN1-ACSL6 PLIN1 chr15 90212731 - ACSL6 chr5 131321151 - Exonic hg19 BRCA TCGA-E9-A1RC-01A 18 5 In-Frame Inter-chr q26.1 q31.1 Seq+ 69496 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLIN2-CA10 PLIN2 chr9 19123563 - CA10 chr17 49825178 - Exonic hg19 BRCA TCGA-D8-A1JA-01A 25 24 5'UTR-CDS Inter-chr p22.1 q22 Seq+ 69497 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLLP-CNGB1 PLLP chr16 57318318 - CNGB1 chr16 57946898 - Exonic hg19 UCEC TCGA-EY-A54A-01A 2 4 In-Frame Intra-chr q13 q21 69498 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLOD2-ABCG1 PLOD2 chr3 145824319 - ABCG1 chr21 43645781 + Exonic hg19 BRCA TCGA-AO-A129-01A 4 5 In-Frame Inter-chr q24 q22.3 Seq+ 69499 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLOD2-PLSCR4 PLOD2 chr3 145878668 - PLSCR4 chr3 145939879 - Exonic hg19 BRCA TCGA-D8-A140-01A 24 15 CDS-5'UTR Intra-chr q24 q24 Seq+ 69500 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLP1-SCAF8 PLP1 chrX 103031927 - SCAF8 chr6 155095123 + Exonic hg19 SARC TCGA-HB-A3YV-01A 17 11 Out-of-frame Inter-chr q22.2 q25.2 Seq+ 69501 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLP1-SGK1 PLP1 chrX 103047545 - SGK1 chr6 134639049 - Exonic hg19 LGG TCGA-HT-7902-01A 2 1 Out-of-frame Inter-chr q22.2 q23.2 AGC:SGK Oncogene 69502 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLS1-CLDN18 PLS1 chr3 142315351 - CLDN18 chr3 137742500 + Exonic hg19 BRCA TCGA-A2-A0CL-01A 42 5 5'UTR-CDS Intra-chr q23 q22.3 Seq+ 69503 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLS1-PIK3CB PLS1 chr3 142315351 - PIK3CB chr3 138456728 - Exonic hg19 KIRP TCGA-G7-6793-01A 10 8 5'UTR-CDS Intra-chr q23 q22.3 Oncogene Seq+ 69504 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLS1-TFDP2 PLS1 chr3 142315351 - TFDP2 chr3 141682805 - Exonic hg19 LUSC TCGA-18-3416-01A 22 8 5'UTR-CDS Intra-chr q23 q23 Transcription factor Seq+ 69505 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLS3-CCDC64 PLS3 chrX 114874815 - CCDC64 chr12 120499514 + Exonic hg19 LUAD TCGA-05-4427-01A 259 85 In-Frame Inter-chr q23 Seq+ 69506 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLSCR1-MACROD2 PLSCR1 chr3 146234793 - MACROD2 chr20 16021846 + Exonic hg19 HNSC TCGA-QK-A6V9-01A 10 12 Out-of-frame Inter-chr q24 Transcription factor p12.1 Seq+ 69507 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLTP-EEF2 PLTP chr20 44527399 - EEF2 chr19 3985461 - Exonic hg19 THYM TCGA-ZB-A965-01A 3 1 3'UTR-5'UTR Inter-chr q13.12 p13.3 69508 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLVAP-ABCF1 PLVAP chr19 17462264 - ABCF1 chr6 30545853 + Exonic hg19 THCA TCGA-EM-A2CL-01A 2 2 3'UTR-CDS Inter-chr p13.11 69509 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLVAP-CLCN3 PLVAP chr19 17462264 - CLCN3 chr4 170623929 + Exonic hg19 KIRC TCGA-AK-3444-01A 2 18 3'UTR-CDS Inter-chr p13.11 q33 69510 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLVAP-FOXP1 PLVAP chr19 17462264 - FOXP1 chr3 71007472 - Exonic hg19 THCA TCGA-DJ-A3UK-01A 2 25 3'UTR-3'UTR Inter-chr p13.11 p13 Oncogene Tumor suppressor gene Transcription factor 69511 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXDC1-ACE PLXDC1 chr17 37307615 - ACE chr17 61566009 + Exonic hg19 SARC TCGA-FX-A3TO-01A 14 12 In-Frame Intra-chr q12 q23.3 Seq+ 69512 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXDC1-KRT36 PLXDC1 chr17 37262107 - KRT36 chr17 39645958 - Exonic hg19 CESC TCGA-EK-A2RM-01A 8 1 Out-of-frame Intra-chr q12 q21.2 69513 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXDC2-C10orf112 PLXDC2 chr10 20106120 - C10orf112 chr10 19856431 + Exonic hg19 LGG TCGA-DU-5847-01A 4 6 Out-of-frame Intra-chr p12.31 Seq+ 69514 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXDC2-PDCD11 PLXDC2 chr10 20466338 - PDCD11 chr10 105182745 + Exonic hg19 SARC TCGA-FX-A76Y-01A 12 4 Out-of-frame Intra-chr p12.31 q24.33 Seq+ 69515 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXDC2-ST8SIA6 PLXDC2 chr10 20357168 - ST8SIA6 chr10 17432619 - Exonic hg19 BRCA TCGA-A7-A4SB-01A 7 4 Out-of-frame Intra-chr p12.31 p12.33 Seq+ 69516 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXDC2-SYNE1 PLXDC2 chr10 20290915 - SYNE1 chr6 152793548 - Exonic hg19 BRCA TCGA-A8-A07R-01A 11 12 In-Frame Inter-chr p12.31 q25.2 Oncogene Seq+ 69517 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXDC2-THNSL1 PLXDC2 chr10 20106120 - THNSL1 chr10 25310671 + Exonic hg19 SKCM TCGA-D3-A1Q5-06A 6 1 CDS-5'UTR Intra-chr p12.31 p12.1 Seq+ 69518 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXDC2-VAMP5 PLXDC2 chr10 20106120 - VAMP5 chr2 85818848 + Exonic hg19 BLCA TCGA-GD-A3OS-01A 10 6 Out-of-frame Inter-chr p12.31 p11.2 Seq+ 69519 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXNA1-CHCHD6 PLXNA1 chr3 126708630 - CHCHD6 chr3 126633523 + Exonic hg19 BLCA TCGA-CF-A1HS-01A 62 32 In-Frame Intra-chr q21.3 q21.3 Seq+ 69520 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXNA1-CHCHD6 PLXNA1 chr3 126710409 - CHCHD6 chr3 126445921 + Exonic hg19 PRAD TCGA-HC-8265-01A 4 4 In-Frame Intra-chr q21.3 q21.3 Seq+ 69521 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXNA1-DZIP1L PLXNA1 chr3 126708630 - DZIP1L chr3 137811386 - Exonic hg19 PRAD TCGA-KK-A6E1-01A 2 1 In-Frame Intra-chr q21.3 q22.3 Seq+ 69522 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXNA2-DUSP10 PLXNA2 chr1 208383625 - DUSP10 chr1 221879808 - Exonic hg19 BRCA TCGA-AR-A24Z-01A 5 1 Out-of-frame Intra-chr q32.2 q41 Seq+ 69523 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXNA3-ATP6AP1 PLXNA3 chrX 153699981 - ATP6AP1 chrX 153660176 + Exonic hg19 STAD TCGA-BR-8361-01A 4 21 In-Frame Intra-chr q28 q28 Seq+ 69524 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXNA3-TKTL1 PLXNA3 chrX 153698954 - TKTL1 chrX 153533656 + Exonic hg19 LUAD TCGA-55-A493-01A 10 7 In-Frame Intra-chr q28 q28 Seq+ 69525 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXNA4-TRHDE PLXNA4 chr7 132261181 - TRHDE chr12 72680461 + Exonic hg19 SARC TCGA-SG-A6Z7-01A 5 2 5'UTR-CDS Inter-chr q32.3 q21.1 Seq+ 69526 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXNB1-ITIH3 PLXNB1 chr3 48463083 - ITIH3 chr3 52838742 + Exonic hg19 MESO TCGA-UD-AABY-01A 13 7 Out-of-frame Intra-chr p21.31 p21.1 Seq+ 69527 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXNB1-SLC26A6 PLXNB1 chr3 48460986 - SLC26A6 chr3 48667144 - Exonic hg19 LIHC TCGA-DD-A1EB-01A 10 8 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 69528 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXNB2-DLG2 PLXNB2 chr22 50733148 - DLG2 chr11 83691685 - Exonic hg19 BRCA TCGA-AN-A0FV-01A 15 3 5'UTR-CDS Inter-chr q13.33 q14.1 Seq+ 69529 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXNB2-MAST4 PLXNB2 chr22 50722031 - MAST4 chr5 66195779 + Exonic hg19 KIRP TCGA-P4-A5EB-01A 20 20 Out-of-frame Inter-chr q13.33 q12.3 AGC:MAST Seq+ 69530 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXNB2-P4HTM PLXNB2 chr22 50713408 - P4HTM chr3 49038871 + Exonic hg19 PRAD TCGA-J9-A52B-01A 2 4 3'UTR-CDS Inter-chr q13.33 p21.31 69531 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXNB2-ST3GAL1 PLXNB2 chr22 50718434 - ST3GAL1 chr8 134511432 - Exonic hg19 CESC TCGA-VS-A9V0-01A 19 34 CDS-5'UTR Inter-chr q13.33 q24.22 Seq+ 69532 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXNB2-SUPT16H PLXNB2 chr22 50713408 - SUPT16H chr14 21829491 - Exonic hg19 LUAD TCGA-55-7913-01B 2 1 3'UTR-CDS Inter-chr q13.33 q11.2 69533 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXNB2-TMPRSS6 PLXNB2 chr22 50733148 - TMPRSS6 chr22 37499458 - Exonic hg19 UCEC TCGA-AJ-A3EM-01A 65 66 5'UTR-CDS Intra-chr q13.33 q12.3 Tumor suppressor gene Seq+ 69534 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXNB2-UTRN PLXNB2 chr22 50713408 - UTRN chr6 144665237 + Exonic hg19 LUAD TCGA-75-7031-01A 2 6 3'UTR-CDS Inter-chr q13.33 q24.2 69535 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXNC1-CCDC41 PLXNC1 chr12 94659001 - CCDC41 chr12 94706793 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 388 211 In-Frame Intra-chr q22 Tumor suppressor gene Seq+ 69536 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXNC1-CRADD PLXNC1 chr12 94659001 - CRADD chr12 94243746 + Exonic hg19 LUSC TCGA-L3-A524-01A 52 23 Out-of-frame Intra-chr q22 Tumor suppressor gene q22 Seq+ 69537 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXNC1-CRADD PLXNC1 chr12 94697827 - CRADD chr12 94072545 + Exonic hg19 SKCM TCGA-WE-A8K1-06A 43 36 5'UTR-5'UTR Intra-chr q22 Tumor suppressor gene q22 Seq+ 69538 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXNC1-INSR PLXNC1 chr12 94694833 - INSR chr19 7267907 - Exonic hg19 SARC TCGA-3B-A9HS-01A 14 9 Out-of-frame Inter-chr q22 Tumor suppressor gene p13.2 TK:InsR 69539 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXNC1-TXNRD1 PLXNC1 chr12 94676177 - TXNRD1 chr12 104742131 + Exonic hg19 SARC TCGA-DX-A3U5-01A 263 126 In-Frame Intra-chr q22 Tumor suppressor gene q23.3 Seq+ 69540 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXND1-NEK11 PLXND1 chr3 129304795 - NEK11 chr3 131068401 + Exonic hg19 SARC TCGA-DX-AB37-01A 45 34 Out-of-frame Intra-chr q22.1 q22.1 Other:NEK Seq+ 69541 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PLXND1-TMCC1 PLXND1 chr3 129277271 - TMCC1 chr3 129373946 - Exonic hg19 UCEC TCGA-AX-A2H4-01A 15 4 Out-of-frame Intra-chr q22.1 q22.1 KB Seq+ 69542 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PMEPA1-ARFGEF2 PMEPA1 chr20 56223454 - ARFGEF2 chr20 47615777 + Exonic hg19 HNSC TCGA-CQ-A4C7-01A 2 10 Out-of-frame Intra-chr q13.31 q13.13 69543 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PMEPA1-EMILIN3 PMEPA1 chr20 56284530 - EMILIN3 chr20 39993797 - Exonic hg19 BRCA TCGA-AO-A03P-01A 3 1 Out-of-frame Intra-chr q13.31 q12 69544 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PMEPA1-ETV4 PMEPA1 chr20 56284530 - ETV4 chr17 41613847 - Exonic hg19 PRAD TCGA-CH-5762-01A 470 242 In-Frame Inter-chr q13.31 q21.31 Oncogene Transcription factor Seq+ 69545 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PMEPA1-PIGP PMEPA1 chr20 56284530 - PIGP chr21 38444837 - Exonic hg19 BRCA TCGA-BH-A1FE-01A 63 62 CDS-5'UTR Inter-chr q13.31 q22.13 Seq+ 69546 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PMEPA1-PTGIS PMEPA1 chr20 56284530 - PTGIS chr20 48130932 - Exonic hg19 BRCA TCGA-AR-A0TX-01A 42 26 Out-of-frame Intra-chr q13.31 q13.13 Seq+ 69547 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PMEPA1-RALY PMEPA1 chr20 56284530 - RALY chr20 32619328 + Exonic hg19 BRCA TCGA-AC-A62V-01A 30 18 CDS-5'UTR Intra-chr q13.31 q11.22 Seq+ 69548 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PMF1-RAB25 PMF1 chr1 156182967 - RAB25 chr1 156038061 + Exonic hg19 CESC TCGA-DS-A1OC-01A 131 57 In-Frame Intra-chr q22 q22 Tumor suppressor gene Seq+ 69549 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PMF1-SYT11 PMF1 chr1 156182967 - SYT11 chr1 155850291 + Exonic hg19 STAD TCGA-BR-8590-01A 5 7 Out-of-frame Intra-chr q22 q22 Seq+ 69550 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PML-POLN PML chr15 74325755 - POLN chr4 2097660 - Exonic hg19 BRCA TCGA-HN-A2NL-01A 5 2 Out-of-frame Inter-chr q24.1 Oncogene Tumor suppressor gene p16.3 69551 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PML-RARA PML chr15 74325755 - RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2803-03A 18 4 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 69552 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PML-RARA PML chr15 74315749 - RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2823-03A 26 31 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 69553 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PML-RARA PML chr15 74315749 - RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2840-03A 15 20 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 69554 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PML-RARA PML chr15 74325755 - RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2841-03B 18 7 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 69555 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PML-RARA PML chr15 74325755 - RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2862-03A 61 14 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 69556 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PML-RARA PML chr15 74325755 - RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2872-03A 18 9 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 69557 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PML-RARA PML chr15 74325755 - RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2897-03A 29 7 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 69558 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PML-RARA PML chr15 74315749 - RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2980-03A 14 8 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 69559 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PML-RARA PML chr15 74325755 - RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2982-03B 19 7 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 69560 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PML-RARA PML chr15 74315749 - RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2991-03A 48 18 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 69561 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PML-RARA PML chr15 74325755 - RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2994-03A 29 8 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 69562 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PML-RARA PML chr15 74315749 - RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2998-03A 39 18 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 69563 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PML-RARA PML chr15 74325755 - RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-2999-03B 7 6 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 69564 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PML-RARA PML chr15 74315749 - RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-3001-03A 43 3 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 69565 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PML-RARA PML chr15 74315749 - RARA chr17 38504568 + Exonic hg19 LAML TCGA-AB-3007-03A 50 20 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 69566 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PMM2-ABAT PMM2 chr16 8905570 - ABAT chr16 8829556 + Exonic hg19 SARC TCGA-DX-A23V-01A 14 6 CDS-5'UTR Intra-chr p13.2 p13.2 69567 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PMM2-UBFD1 PMM2 chr16 8906963 - UBFD1 chr16 23573527 + Exonic hg19 BRCA TCGA-E9-A5FL-01A 30 16 In-Frame Intra-chr p13.2 p12.2 Seq+ 69568 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PMP22-AC217773.1 PMP22 chr17 15162411 - AC217773.1 chr17 44273734 + Exonic hg19 SKCM TCGA-GN-A4U8-06A 19 38 Out-of-frame Intra-chr p12 69569 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PMPCB-PRKAR2B PMPCB chr7 102952578 - PRKAR2B chr7 106762397 + Exonic hg19 PRAD TCGA-FC-7708-01A 21 13 In-Frame Intra-chr q22.1 Seq+ 69570 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PMPCB-WWOX PMPCB chr7 102939155 - WWOX chr16 79245505 + Exonic hg19 STAD TCGA-VQ-A928-01A 2 13 In-Frame Inter-chr q22.1 q23.1 Tumor suppressor gene Seq+ 69571 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PMS1-GCG PMS1 chr2 190670480 - GCG chr2 163004024 - Exonic hg19 BRCA TCGA-EW-A6S9-01A 3 3 Out-of-frame Intra-chr q32.2 Oncogene q24.2 Seq+ 69572 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PMS2-AIMP2 PMS2 chr7 6048628 - AIMP2 chr7 6054777 + Exonic hg19 LUAD TCGA-75-5146-01A 3 1 Out-of-frame Intra-chr p22.1 Oncogene p22.1 Tumor suppressor gene 69573 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PMS2-DNAH11 PMS2 chr7 6048628 - DNAH11 chr7 21813384 + Exonic hg19 LGG TCGA-E1-A7Z2-01A 6 6 Out-of-frame Intra-chr p22.1 Oncogene p15.3 Seq+ 69574 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PMS2-USP42 PMS2 chr7 6048628 - USP42 chr7 6150756 + Exonic hg19 MESO TCGA-LK-A4O2-01A 2 1 CDS-5'UTR Intra-chr p22.1 Oncogene p22.1 69575 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PMVK-PYGO2 PMVK chr1 154904828 - PYGO2 chr1 154932322 - Exonic hg19 UCEC TCGA-EO-A3AS-01A 16 8 In-Frame Intra-chr q21.3 q21.3 Seq+ 69576 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PNCK-HCFC1 PNCK chrX 152952886 - HCFC1 chrX 153230177 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 18 3 5'UTR-CDS Intra-chr q28 q28 Seq+ 69577 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PNLDC1-KLHL32 PNLDC1 chr6 160225669 - KLHL32 chr6 97489368 + Exonic hg19 SKCM TCGA-FS-A1Z0-06A 5 4 Out-of-frame Intra-chr q25.3 q16.1 Seq+ 69578 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PNPLA2-EPS8L2 PNPLA2 chr11 822606 - EPS8L2 chr11 720062 + Exonic hg19 STAD TCGA-BR-8485-01A 7 36 In-Frame Intra-chr p15.5 p15.5 Seq+ 69579 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PNPLA6-ATP13A1 PNPLA6 chr19 7607970 - ATP13A1 chr19 19756341 - Exonic hg19 SKCM TCGA-EE-A2MG-06A 243 89 In-Frame Intra-chr p13.2 p13.11 Seq+ 69580 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PNPLA6-ECSIT PNPLA6 chr19 7599125 - ECSIT chr19 11618863 - Exonic hg19 BRCA TCGA-A7-A56D-01A 10 25 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 69581 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PNPLA7-SNAPC4 PNPLA7 chr9 140379039 - SNAPC4 chr9 139283043 - Exonic hg19 LUAD TCGA-4B-A93V-01A 4 2 Out-of-frame Intra-chr q34.3 q34.3 Transcription factor Seq+ 69582 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PNPLA8-CFTR PNPLA8 chr7 108128203 - CFTR chr7 117282492 + Exonic hg19 LIHC TCGA-RC-A6M6-01A 13 7 In-Frame Intra-chr q31.1 q31.2 Tumor suppressor gene Seq+ 69583 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PNPO-NPEPPS PNPO chr17 46020796 - NPEPPS chr17 45669322 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 2 4 Out-of-frame Intra-chr q21.32 q21.32 Seq+ 69584 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POC1A-TWF2 POC1A chr3 52172185 - TWF2 chr3 52265555 - Exonic hg19 UCEC TCGA-PG-A5BC-01A 15 7 In-Frame Intra-chr p21.2 p21.2 Seq+ 69585 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POC1B-C12orf26 POC1B chr12 89853415 - C12orf26 chr12 82850506 + Exonic hg19 SARC TCGA-DX-AB2S-01A 2 2 Out-of-frame Intra-chr q21.33 69586 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POC1B-KRT78 POC1B chr12 89918897 - KRT78 chr12 53233768 - Exonic hg19 SKCM TCGA-DA-A1HW-06A 3 1 Out-of-frame Intra-chr q21.33 q13.13 69587 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POC1B-TNR POC1B chr12 89885713 - TNR chr1 175375913 - Exonic hg19 SARC TCGA-SG-A6Z7-01A 6 2 CDS-5'UTR Inter-chr q21.33 q25.1 Seq+ 69588 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POFUT1-HCK POFUT1 chr20 30818864 - HCK chr20 30689120 + Exonic hg19 LIHC TCGA-G3-A25X-01A 70 37 Out-of-frame Intra-chr q11.21 q11.21 TK:Src Seq+ 69589 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POFUT1-PRICKLE2 POFUT1 chr20 30804524 - PRICKLE2 chr3 64184643 - Exonic hg19 SKCM TCGA-D3-A1Q9-06A 11 5 CDS-5'UTR Inter-chr q11.21 p14.1 Seq+ 69590 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POFUT2-LRP2 POFUT2 chr21 46707656 - LRP2 chr2 170151220 - Exonic hg19 LUAD TCGA-64-5779-01A 3 1 Out-of-frame Inter-chr q22.3 q31.1 69591 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POFUT2-WDR4 POFUT2 chr21 46702264 - WDR4 chr21 44275890 - Exonic hg19 BRCA TCGA-BH-A1EY-01A 7 1 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 69592 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POGK-FMOD POGK chr1 166810325 - FMOD chr1 203311622 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 92 57 Out-of-frame Intra-chr q24.1 Transcription factor q32.1 Seq+ 69593 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POGZ-GBA POGZ chr1 151395873 - GBA chr1 155210971 - Exonic hg19 BRCA TCGA-A2-A04U-01A 9 9 CDS-5'UTR Intra-chr q21.3 Seq+ 69594 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POGZ-HHIPL2 POGZ chr1 151381170 - HHIPL2 chr1 222712116 - Exonic hg19 SKCM TCGA-GN-A26A-06A 6 9 Out-of-frame Intra-chr q21.3 q41 Seq+ 69595 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POGZ-SLC6A13 POGZ chr1 151395873 - SLC6A13 chr12 352979 - Exonic hg19 HNSC TCGA-UF-A7JD-01A 7 4 In-Frame Inter-chr q21.3 p13.33 Seq+ 69596 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLA1-CXorf58 POLA1 chrX 24948666 - CXorf58 chrX 23928400 + Exonic hg19 BLCA TCGA-FD-A3SJ-01A 5 3 CDS-5'UTR Intra-chr p22.11 p22.11 Seq+ 69597 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLA1-MAP3K15 POLA1 chrX 24906239 - MAP3K15 chrX 19428091 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 14 10 In-Frame Intra-chr p22.11 p22.12 Seq+ 69598 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLA1-TIMELESS POLA1 chrX 24735875 - TIMELESS chr12 56828015 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 3 5 CDS-5'UTR Inter-chr p22.11 q13.3 Seq+ 69599 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLA2-AP000790.1 POLA2 chr11 65049992 - AP000790.1 chr11 59710320 + Exonic hg19 LUAD TCGA-53-A4EZ-01A 22 4 Out-of-frame Intra-chr q13.1 q12.1 69600 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLA2-CAPN1 POLA2 chr11 65029842 - CAPN1 chr11 64972154 + Exonic hg19 LUSC TCGA-LA-A7SW-01A 31 23 In-Frame Intra-chr q13.1 q13.1 Seq+ 69601 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLA2-PPFIA1 POLA2 chr11 65047097 - PPFIA1 chr11 70200407 + Exonic hg19 BRCA TCGA-C8-A1HK-01A 7 10 In-Frame Intra-chr q13.1 q13.3 Seq+ 69602 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLB-IKBKB POLB chr8 42202537 - IKBKB chr8 42166419 + Exonic hg19 ESCA TCGA-Z6-AAPN-01A 2 6 In-Frame Intra-chr p11.21 p11.21 Oncogene 69603 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLB-UNC5D POLB chr8 42196203 - UNC5D chr8 35606045 + Exonic hg19 LUAD TCGA-44-A47G-01A 3 2 Out-of-frame Intra-chr p11.21 p12 Tumor suppressor gene 69604 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLB-UVRAG POLB chr8 42202537 - UVRAG chr11 75719851 + Exonic hg19 LUAD TCGA-95-8039-01A 11 9 In-Frame Inter-chr p11.21 q13.5 Tumor suppressor gene Seq+ 69605 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLD3-ENC1 POLD3 chr11 74324055 - ENC1 chr5 73933526 - Exonic hg19 SKCM TCGA-EE-A20C-06A 2 1 5'UTR-5'UTR Inter-chr q13.4 q13.3 Seq+ 69606 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLD3-ODZ4 POLD3 chr11 74331134 - ODZ4 chr11 78781054 - Exonic hg19 LUAD TCGA-MN-A4N1-01A 10 15 5'UTR-5'UTR Intra-chr q13.4 Seq+ 69607 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLD3-PPME1 POLD3 chr11 74324055 - PPME1 chr11 73914773 + Exonic hg19 UCEC TCGA-AJ-A3I9-01A 39 16 In-Frame Intra-chr q13.4 q13.4 Seq+ 69608 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLDIP3-ARFGAP3 POLDIP3 chr22 42995704 - ARFGAP3 chr22 43243638 - Exonic hg19 STAD TCGA-BR-4357-01A 28 37 In-Frame Intra-chr q13.2 q13.2 Seq+ 69609 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLDIP3-MED15 POLDIP3 chr22 42998776 - MED15 chr22 20905723 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 22 18 In-Frame Intra-chr q13.2 q11.21 Seq+ 69610 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLDIP3-SH3BGRL2 POLDIP3 chr22 43010805 - SH3BGRL2 chr6 80383331 + Exonic hg19 PAAD TCGA-2J-AABP-01A 2 4 Out-of-frame Inter-chr q13.2 q14.1 69611 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLDIP3-TTLL1 POLDIP3 chr22 43010805 - TTLL1 chr22 43435911 - Exonic hg19 PRAD TCGA-KK-A8IJ-01A 3 3 In-Frame Intra-chr q13.2 q13.2 69612 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLE-ANKS1B POLE chr12 133263840 - ANKS1B chr12 99225914 - Exonic hg19 BLCA TCGA-CF-A27C-01A 5 9 Out-of-frame Intra-chr q24.33 q23.1 Seq+ 69613 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLG-CGNL1 POLG chr15 89866635 - CGNL1 chr15 57808978 + Exonic hg19 LIHC TCGA-DD-AAVW-01A 5 3 In-Frame Intra-chr q26.1 q21.3 Seq+ 69614 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLH-C12orf71 POLH chr6 43573056 - C12orf71 chr12 27234400 - Exonic hg19 SARC TCGA-DX-A23Y-01A 6 8 In-Frame Inter-chr p21.1 p11.23 Seq+ 69615 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLK-HSD17B4 POLK chr5 74848416 - HSD17B4 chr5 118792010 + Exonic hg19 SKCM TCGA-D3-A51N-06A 55 86 Out-of-frame Intra-chr q13.3 q23.1 Seq+ 69616 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLK-SKIV2L2 POLK chr5 74886265 - SKIV2L2 chr5 54635838 + Exonic hg19 READ TCGA-CL-5918-01A 4 2 Out-of-frame Intra-chr q13.3 q11.2 Seq+ 69617 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLR1A-CTNNA2 POLR1A chr2 86265823 - CTNNA2 chr2 80831199 + Exonic hg19 READ TCGA-EF-5831-01A 73 58 In-Frame Intra-chr p11.2 p12 Tumor suppressor gene Seq+ 69618 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLR1A-REEP1 POLR1A chr2 86292397 - REEP1 chr2 86509365 - Exonic hg19 LUAD TCGA-44-7660-01A 8 3 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 69619 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLR1A-REEP1 POLR1A chr2 86292397 - REEP1 chr2 86509365 - Exonic hg19 LUSC TCGA-77-8133-01A 8 9 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 69620 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLR1A-REEP1 POLR1A chr2 86292397 - REEP1 chr2 86509365 - Exonic hg19 KIRC TCGA-AK-3454-01A 2 5 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 69621 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLR1A-REEP1 POLR1A chr2 86292397 - REEP1 chr2 86509365 - Exonic hg19 KIRC TCGA-B0-4822-01A 4 4 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 69622 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLR1A-REEP1 POLR1A chr2 86292397 - REEP1 chr2 86509365 - Exonic hg19 KICH TCGA-KO-8411-01A 2 3 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 69623 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLR1A-SETD2 POLR1A chr2 86292397 - SETD2 chr3 47079267 - Exonic hg19 MESO TCGA-UT-A88E-01B 9 3 Out-of-frame Inter-chr p11.2 p21.31 Oncogene Tumor suppressor gene 69624 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLR1B-NRXN2 POLR1B chr2 113317151 - NRXN2 chr11 64436076 - Exonic hg19 UCS TCGA-NF-A4WX-01A 2 1 Out-of-frame Inter-chr q14.1 q13.1 69625 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLR1C-MDGA1 POLR1C chr6 43487576 - MDGA1 chr6 37631882 - Exonic hg19 BRCA TCGA-AC-A5XS-01A 7 4 In-Frame Intra-chr p21.1 p21.2 Seq+ 69626 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLR2B-CEP135 POLR2B chr4 57861575 - CEP135 chr4 56851447 + Exonic hg19 LGG TCGA-S9-A89Z-01A 3 2 In-Frame Intra-chr q12 q12 Seq+ 69627 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLR2B-FIP1L1 POLR2B chr4 57845170 - FIP1L1 chr4 54308820 + Exonic hg19 UCEC TCGA-BK-A139-01A 14 76 In-Frame Intra-chr q12 q12 Seq+ 69628 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLR2B-FIP1L1 POLR2B chr4 57845170 - FIP1L1 chr4 54308820 + Exonic hg19 UCEC TCGA-BK-A139-02A 125 88 In-Frame Intra-chr q12 q12 Seq+ 69629 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLR2B-RP11-631B21.2 POLR2B chr4 57861575 - RP11-631B21.2 chr3 107642478 + Exonic hg19 BLCA TCGA-FD-A3SJ-01A 18 6 Out-of-frame Inter-chr q12 69630 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLR2E-ZNF420 POLR2E chr19 1089471 - ZNF420 chr19 37618030 + Exonic hg19 BLCA TCGA-FD-A3SR-01A 17 13 3'UTR-CDS Intra-chr p13.3 q13.12 Transcription factor Seq+ 69631 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLR2F-MICALL1 POLR2F chr22 38382319 - MICALL1 chr22 38308358 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 3 2 3'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 69632 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLR2F-MXI1 POLR2F chr22 38382319 - MXI1 chr10 111987947 + Exonic hg19 SKCM TCGA-D3-A3MU-06A 5 1 3'UTR-CDS Inter-chr q13.1 q25.2 Tumor suppressor gene Transcription factor 69633 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLR3A-TTC6 POLR3A chr10 79767460 - TTC6 chr14 38310650 + Exonic hg19 PRAD TCGA-ZG-A9N3-01A 6 8 Out-of-frame Inter-chr q22.3 q21.1 Seq+ 69634 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLR3B-PDS5B POLR3B chr12 106751729 - PDS5B chr13 33315218 + Exonic hg19 PRAD TCGA-HC-7817-01B 5 1 In-Frame Inter-chr q23.3 q13.1 Tumor suppressor gene Seq+ 69635 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLR3B-RBM19 POLR3B chr12 106799754 - RBM19 chr12 114282593 - Exonic hg19 SARC TCGA-3B-A9HO-01A 4 2 In-Frame Intra-chr q23.3 q24.21 69636 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLR3B-TCP11L2 POLR3B chr12 106804738 - TCP11L2 chr12 106740064 + Exonic hg19 LGG TCGA-E1-A7YE-01A 2 5 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 69637 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLR3E-RMI2 POLR3E chr16 22343506 - RMI2 chr16 11444499 + Exonic hg19 BRCA TCGA-BH-A1FE-01A 16 5 Out-of-frame Intra-chr p13.13 Seq+ 69638 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLR3H-CTNND2 POLR3H chr22 41936703 - CTNND2 chr5 11732384 - Exonic hg19 SKCM TCGA-D3-A2JC-06A 41 22 In-Frame Inter-chr q13.2 p15.2 Seq+ 69639 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLR3H-ENTHD1 POLR3H chr22 41936703 - ENTHD1 chr22 40283907 - Exonic hg19 BRCA TCGA-AO-A03V-01A 6 2 CDS-5'UTR Intra-chr q13.2 q13.1 Seq+ 69640 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POLR3K-C19orf63 POLR3K chr16 103476 - C19orf63 chr19 50981186 + Exonic hg19 LUSC TCGA-63-A5MI-01A 6 2 In-Frame Inter-chr p13.3 69641 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POM121C-C7orf42 POM121C chr7 75113475 - C7orf42 chr7 66406835 + Exonic hg19 SARC TCGA-FX-A3TO-01A 5 19 5'UTR-5'UTR Intra-chr q11.23 69642 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POMT1-NUP214 POMT1 chr9 134378460 - NUP214 chr9 134090599 + Exonic hg19 LUAD TCGA-50-5941-01A 11 4 5'UTR-CDS Intra-chr q34.13 q34.13 Oncogene Seq+ 69643 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POMT1-PPAPDC3 POMT1 chr9 134386854 - PPAPDC3 chr9 134183310 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 2 3 Out-of-frame Intra-chr q34.13 Seq+ 69644 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POP1-C8orf47 POP1 chr8 99148966 - C8orf47 chr8 99105449 + Exonic hg19 READ TCGA-AG-3731-01A 8 1 Out-of-frame Intra-chr q22.2 69645 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POP1-TATDN1 POP1 chr8 99146887 - TATDN1 chr8 125500937 - Exonic hg19 LIHC TCGA-HP-A5N0-01A 12 11 Out-of-frame Intra-chr q22.2 q24.13 Seq+ 69646 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POR-PIBF1 POR chr7 75616172 - PIBF1 chr13 73410241 + Exonic hg19 THCA TCGA-EM-A1YE-01A 2 2 Out-of-frame Inter-chr q11.23 q21.33 69647 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POR-RHBDD2 POR chr7 75544497 - RHBDD2 chr7 75510683 + Exonic hg19 ESCA TCGA-LN-A49U-01A 3 18 5'UTR-5'UTR Intra-chr q11.23 q11.23 Seq+ 69648 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POSTN-PTN POSTN chr13 38136726 - PTN chr7 136938384 - Exonic hg19 ACC TCGA-OR-A5J8-01A 2 21 3'UTR-CDS Inter-chr q13.3 q33 69649 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POSTN-YY1 POSTN chr13 38136728 - YY1 chr14 100728641 + Exonic hg19 BRCA TCGA-A2-A25C-01A 2 33 3'UTR-CDS Inter-chr q13.3 q32.2 Transcription factor 69650 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POSTN-YY1 POSTN chr13 38136728 - YY1 chr14 100728641 + Exonic hg19 BRCA TCGA-AO-A03L-01A 2 21 3'UTR-CDS Inter-chr q13.3 q32.2 Transcription factor 69651 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POT1-RTKN2 POT1 chr7 124568869 - RTKN2 chr10 63959620 - Exonic hg19 BLCA TCGA-BT-A42E-01A 3 1 5'UTR-CDS Inter-chr q31.33 Oncogene q21.2 Seq+ 69652 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POU2AF1-BCO2 POU2AF1 chr11 111228170 - BCO2 chr11 112084447 + Exonic hg19 UCEC TCGA-KP-A3VZ-01A 3 2 In-Frame Intra-chr q23.1 Transcription factor q23.1 Seq+ 69653 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POU2AF1-BTG4 POU2AF1 chr11 111249887 - BTG4 chr11 111369527 - Exonic hg19 LUSC TCGA-77-A5GH-01A 5 3 CDS-5'UTR Intra-chr q23.1 Transcription factor q23.1 Tumor suppressor gene Seq+ 69654 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POU2F1-CD247 POU2F1 chr1 167370793 - CD247 chr1 167404671 - Exonic hg19 BRCA TCGA-A2-A04U-01A 3 4 Out-of-frame Intra-chr q24.2 Transcription factor q24.2 69655 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POU2F1-FMO1 POU2F1 chr1 167353188 - FMO1 chr1 171227221 + Exonic hg19 PRAD TCGA-TP-A8TV-01A 4 1 5'UTR-5'UTR Intra-chr q24.2 Transcription factor q24.3 Seq+ 69656 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POU2F1-LCE2A POU2F1 chr1 167370793 - LCE2A chr1 152671358 + Exonic hg19 LIHC TCGA-DD-A113-01A 5 2 5'UTR-5'UTR Intra-chr q24.2 Transcription factor q21.3 Seq+ 69657 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POU2F1-RPRD2 POU2F1 chr1 167190195 - RPRD2 chr1 150413399 + Exonic hg19 PRAD TCGA-EJ-5518-01A 5 7 Out-of-frame Intra-chr q24.2 Transcription factor q21.2 Seq+ 69658 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POU2F1-ZFYVE28 POU2F1 chr1 167190195 - ZFYVE28 chr4 2339223 - Exonic hg19 THYM TCGA-ZB-A969-01A 18 12 Out-of-frame Inter-chr q24.2 Transcription factor p16.3 Seq+ 69659 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq POU6F1-SMAGP POU6F1 chr12 51611426 - SMAGP chr12 51640615 - Exonic hg19 BRCA TCGA-LL-A740-01A 2 4 3'UTR-CDS Intra-chr q13.13 Transcription factor q13.13 69660 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPA1-MICU1 PPA1 chr10 71993020 - MICU1 chr10 74237014 - Exonic hg19 LIHC TCGA-DD-A1EF-01A 25 7 In-Frame Intra-chr q22.1 q22.1 Seq+ 69661 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPA2-C4orf37 PPA2 chr4 106395051 - C4orf37 chr4 98902469 - Exonic hg19 SARC TCGA-DX-A3UA-01A 3 2 Out-of-frame Intra-chr q24 69662 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPA2-SORCS2 PPA2 chr4 106377838 - SORCS2 chr4 7398015 + Exonic hg19 PRAD TCGA-ZG-A9LZ-01A 5 3 In-Frame Intra-chr q24 p16.1 Seq+ 69663 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPAP2A-ANKRD55 PPAP2A chr5 54737679 - ANKRD55 chr5 55422933 - Exonic hg19 LUAD TCGA-55-A48Y-01A 13 24 In-Frame Intra-chr q11.2 Seq+ 69664 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPAP2A-ARL15 PPAP2A chr5 54830400 - ARL15 chr5 53467758 - Exonic hg19 PRAD TCGA-J4-A67N-01A 5 2 Out-of-frame Intra-chr q11.2 Seq+ 69665 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPAP2A-CDC42SE2 PPAP2A chr5 54763697 - CDC42SE2 chr5 130694902 + Exonic hg19 PRAD TCGA-HC-8260-01A 76 70 CDS-5'UTR Intra-chr q31.1 Seq+ 69666 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPAP2A-CNTLN PPAP2A chr5 54830400 - CNTLN chr9 17484293 + Exonic hg19 PRAD TCGA-2A-A8VV-01A 48 31 Out-of-frame Inter-chr p22.2 Seq+ 69667 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPAP2A-MAPK1 PPAP2A chr5 54830400 - MAPK1 chr22 22143097 - Exonic hg19 PRAD TCGA-J4-A67N-01A 2 3 Out-of-frame Inter-chr q11.22 Oncogene Seq+ 69668 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPAP2A-MLPH PPAP2A chr5 54720682 - MLPH chr2 238428553 + Exonic hg19 PRAD TCGA-EJ-5522-01A 2 41 3'UTR-CDS Inter-chr q37.3 69669 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPAP2A-SLC38A9 PPAP2A chr5 54763697 - SLC38A9 chr5 54968523 - Exonic hg19 TGCT TCGA-2G-AAG6-01A 4 6 In-Frame Intra-chr q11.2 Seq+ 69670 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPAP2A-SLC38A9 PPAP2A chr5 54830400 - SLC38A9 chr5 54993820 - Exonic hg19 BLCA TCGA-E7-A85H-01A 23 10 CDS-5'UTR Intra-chr q11.2 Seq+ 69671 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPAP2A-SLC38A9 PPAP2A chr5 54830400 - SLC38A9 chr5 54993820 - Exonic hg19 BLCA TCGA-FD-A6TG-01A 5 16 CDS-5'UTR Intra-chr q11.2 Seq+ 69672 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPAP2A-SPEF2 PPAP2A chr5 54830400 - SPEF2 chr5 35806809 + Exonic hg19 HNSC TCGA-HD-A6HZ-01A 21 12 Out-of-frame Intra-chr p13.2 69673 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPAP2A-SREK1IP1 PPAP2A chr5 54720682 - SREK1IP1 chr5 64024006 - Exonic hg19 PRAD TCGA-VN-A88K-01A 8 1 3'UTR-CDS Intra-chr q12.3 Seq+ 69674 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPAPDC1B-DDHD2 PPAPDC1B chr8 38123659 - DDHD2 chr8 38117558 + Exonic hg19 UCEC TCGA-BK-A139-02A 2 4 Out-of-frame Intra-chr p11.23 Seq+ 69675 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPAPDC1B-TMEM66 PPAPDC1B chr8 38124785 - TMEM66 chr8 29927575 - Exonic hg19 PRAD TCGA-EJ-A65M-01A 3 8 Out-of-frame Intra-chr Seq+ 69676 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPARA-ATXN10 PPARA chr22 46594488 - ATXN10 chr22 46238871 + Exonic hg19 UCS TCGA-N7-A4Y8-01A 33 18 In-Frame Intra-chr q13.31 Tumor suppressor gene Transcription factor q13.31 Seq+ 69677 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPARA-BCL2L13 PPARA chr22 46547873 - BCL2L13 chr22 18165980 + Exonic hg19 SKCM TCGA-BF-AAOX-01A 15 3 5'UTR-CDS Intra-chr q13.31 Tumor suppressor gene Transcription factor q11.21 Seq+ 69678 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPARA-FBLN1 PPARA chr22 46594488 - FBLN1 chr22 45942965 + Exonic hg19 BRCA TCGA-UU-A93S-01A 41 24 In-Frame Intra-chr q13.31 Tumor suppressor gene Transcription factor q13.31 Tumor suppressor gene Seq+ 69679 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPARA-NFIC PPARA chr22 46547873 - NFIC chr19 3456548 + Exonic hg19 SARC TCGA-WK-A8XX-01A 3 6 5'UTR-CDS Inter-chr q13.31 Tumor suppressor gene Transcription factor p13.3 Transcription factor Seq+ 69680 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPARA-RAB2A PPARA chr22 46547873 - RAB2A chr8 61531139 + Exonic hg19 LIHC TCGA-BC-A10X-01A 32 28 5'UTR-CDS Inter-chr q13.31 Tumor suppressor gene Transcription factor q12.1 Seq+ 69681 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPARA-SAMM50 PPARA chr22 46572733 - SAMM50 chr22 44384991 + Exonic hg19 KIRP TCGA-P4-A5EB-01A 268 117 5'UTR-CDS Intra-chr q13.31 Tumor suppressor gene Transcription factor q13.31 Seq+ 69682 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPARD-ANKS1A PPARD chr6 35314927 - ANKS1A chr6 34949467 + Exonic hg19 ESCA TCGA-L5-A4OQ-01A 2 5 Out-of-frame Intra-chr p21.31 Transcription factor p21.31 69683 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPARD-SLC22A7 PPARD chr6 35378994 - SLC22A7 chr6 43267636 + Exonic hg19 SARC TCGA-X6-A7WB-01A 12 6 In-Frame Intra-chr p21.31 Transcription factor p21.1 Seq+ 69684 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPARD-SRGAP1 PPARD chr6 35378994 - SRGAP1 chr12 64502712 + Exonic hg19 SARC TCGA-DX-A23Z-01A 2 5 In-Frame Inter-chr p21.31 Transcription factor q14.2 69685 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPARD-WDR27 PPARD chr6 35314927 - WDR27 chr6 170002417 - Exonic hg19 PRAD TCGA-EJ-5498-01A 14 3 Out-of-frame Intra-chr p21.31 Transcription factor q27 Seq+ 69686 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPARD-WNK4 PPARD chr6 35314927 - WNK4 chr17 40945610 + Exonic hg19 LUAD TCGA-55-6978-01A 5 2 Out-of-frame Inter-chr p21.31 Transcription factor q21.2 69687 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPARG-PAX8 PPARG chr3 12353952 - PAX8 chr2 113984833 - Exonic hg19 THCA TCGA-BJ-A0YZ-01A 23 24 5'UTR-CDS Inter-chr p25.2 Oncogene Tumor suppressor gene Transcription factor q14.1 Oncogene Transcription factor KB Seq+ 69688 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPARG-PAX8 PPARG chr3 12353952 - PAX8 chr2 113984833 - Exonic hg19 THCA TCGA-DE-A4M9-01A 25 21 5'UTR-CDS Inter-chr p25.2 Oncogene Tumor suppressor gene Transcription factor q14.1 Oncogene Transcription factor KB Seq+ 69689 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPARG-PAX8 PPARG chr3 12353952 - PAX8 chr2 113984833 - Exonic hg19 THCA TCGA-EM-A3AJ-01A 34 24 5'UTR-CDS Inter-chr p25.2 Oncogene Tumor suppressor gene Transcription factor q14.1 Oncogene Transcription factor KB Seq+ 69690 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPARG-SYN2 PPARG chr3 12330633 - SYN2 chr3 12187179 + Exonic hg19 BLCA TCGA-DK-AA75-01A 10 19 5'UTR-CDS Intra-chr p25.2 Oncogene Tumor suppressor gene Transcription factor p25.2 Seq+ 69691 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPARG-SYN2 PPARG chr3 12330633 - SYN2 chr3 12228869 + Exonic hg19 BLCA TCGA-E7-A5KE-01A 50 135 5'UTR-CDS Intra-chr p25.2 Oncogene Tumor suppressor gene Transcription factor p25.2 Seq+ 69692 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPARG-SYN2 PPARG chr3 12353952 - SYN2 chr3 12192737 + Exonic hg19 BLCA TCGA-FD-A3SJ-01A 27 21 5'UTR-CDS Intra-chr p25.2 Oncogene Tumor suppressor gene Transcription factor p25.2 Seq+ 69693 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPARGC1B-ARHGEF37 PPARGC1B chr5 149109983 - ARHGEF37 chr5 148977322 + Exonic hg19 HNSC TCGA-CN-A63U-01A 4 1 5'UTR-5'UTR Intra-chr q32 q32 69694 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPARGC1B-IL17B PPARGC1B chr5 149206448 - IL17B chr5 148756588 - Exonic hg19 STAD TCGA-BR-8485-01A 2 1 In-Frame Intra-chr q32 q32 69695 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPAT-KIF16B PPAT chr4 57301516 - KIF16B chr20 16509085 - Exonic hg19 SKCM TCGA-EE-A183-06A 3 5 In-Frame Inter-chr q12 p12.1 69696 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPCDC-LMAN1L PPCDC chr15 75315967 - LMAN1L chr15 75105291 + Exonic hg19 LIHC TCGA-RC-A6M3-01A 2 7 Out-of-frame Intra-chr q24.2 q24.1 Seq+ 69697 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPCDC-SCAMP2 PPCDC chr15 75320794 - SCAMP2 chr15 75146990 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 11 8 In-Frame Intra-chr q24.2 q24.1 Seq+ 69698 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-ALDH3B2 PPFIA1 chr11 70118542 - ALDH3B2 chr11 67434487 - Exonic hg19 BRCA TCGA-D8-A1XS-01A 16 8 5'UTR-5'UTR Intra-chr q13.3 q13.2 Seq+ 69699 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-ANO1 PPFIA1 chr11 70118542 - ANO1 chr11 69933858 + Exonic hg19 SKCM TCGA-D3-A2J6-06A 195 98 In-Frame Intra-chr q13.3 q13.3 Seq+ 69700 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-ANO1 PPFIA1 chr11 70118542 - ANO1 chr11 69962564 + Exonic hg19 CESC TCGA-IR-A3LA-01A 776 671 In-Frame Intra-chr q13.3 q13.3 Seq+ 69701 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-ANO1 PPFIA1 chr11 70118542 - ANO1 chr11 70016993 + Exonic hg19 STAD TCGA-VQ-A91Y-01A 3 24 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 69702 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-ANO1 PPFIA1 chr11 70118542 - ANO1 chr11 70007267 + Exonic hg19 STAD TCGA-VQ-AA6G-01A 30 122 In-Frame Intra-chr q13.3 q13.3 Seq+ 69703 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-ARHGAP32 PPFIA1 chr11 70118542 - ARHGAP32 chr11 128963602 - Exonic hg19 BRCA TCGA-E2-A14S-01A 45 31 In-Frame Intra-chr q13.3 q24.3 Seq+ 69704 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-BBOX1 PPFIA1 chr11 70202360 - BBOX1 chr11 27136999 + Exonic hg19 SARC TCGA-VT-A80J-01A 6 6 In-Frame Intra-chr q13.3 p14.2 Seq+ 69705 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-C11orf24 PPFIA1 chr11 70118542 - C11orf24 chr11 68030386 - Exonic hg19 BRCA TCGA-AR-A24V-01A 45 26 Out-of-frame Intra-chr q13.3 q13.2 Seq+ 69706 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-CBLB PPFIA1 chr11 70208594 - CBLB chr3 105459475 - Exonic hg19 BRCA TCGA-AQ-A04H-01B 75 67 Out-of-frame Inter-chr q13.3 q13.11 Seq+ 69707 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-CD82 PPFIA1 chr11 70118542 - CD82 chr11 44609025 + Exonic hg19 UCEC TCGA-B5-A5OD-01A 63 57 5'UTR-5'UTR Intra-chr q13.3 p11.2 Tumor suppressor gene Seq+ 69708 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-DYNC2H1 PPFIA1 chr11 70118542 - DYNC2H1 chr11 102984266 + Exonic hg19 BLCA TCGA-4Z-AA80-01A 19 10 In-Frame Intra-chr q13.3 q22.3 Seq+ 69709 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-HSD3B2 PPFIA1 chr11 70194526 - HSD3B2 chr1 119957954 + Exonic hg19 BRCA TCGA-A2-A3KC-01A 39 16 5'UTR-5'UTR Inter-chr q13.3 p12 Seq+ 69710 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-INTS4 PPFIA1 chr11 70201917 - INTS4 chr11 77594998 - Exonic hg19 PRAD TCGA-XK-AAIV-01A 28 31 Out-of-frame Intra-chr q13.3 q14.1 Seq+ 69711 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-LRP5 PPFIA1 chr11 70222706 - LRP5 chr11 68178904 + Exonic hg19 BRCA TCGA-BH-A0C3-01A 18 14 Out-of-frame Intra-chr q13.3 q13.2 Seq+ 69712 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-MARK2 PPFIA1 chr11 70118542 - MARK2 chr11 63662631 + Exonic hg19 BRCA TCGA-A2-A1G4-01A 30 16 In-Frame Intra-chr q13.3 q13.1 CAMK:CAMKL Seq+ 69713 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-MS4A5 PPFIA1 chr11 70222706 - MS4A5 chr11 60215122 + Exonic hg19 BRCA TCGA-3C-AAAU-01A 32 30 In-Frame Intra-chr q13.3 q12.2 Seq+ 69714 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-MTL5 PPFIA1 chr11 70208594 - MTL5 chr11 68506256 - Exonic hg19 LUSC TCGA-63-A5M9-01A 16 11 In-Frame Intra-chr q13.3 Seq+ 69715 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-NADSYN1 PPFIA1 chr11 70208594 - NADSYN1 chr11 71208529 + Exonic hg19 SKCM TCGA-BF-A9VF-01A 94 103 In-Frame Intra-chr q13.3 q13.4 Seq+ 69716 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-OAF PPFIA1 chr11 70118542 - OAF chr11 120096370 + Exonic hg19 LUSC TCGA-33-6738-01A 2 1 In-Frame Intra-chr q13.3 q23.3 69717 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-RBFOX2 PPFIA1 chr11 70118542 - RBFOX2 chr22 36164396 - Exonic hg19 LUSC TCGA-85-A4QQ-01A 62 40 In-Frame Inter-chr q13.3 Seq+ 69718 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-RBM14 PPFIA1 chr11 70118542 - RBM14 chr11 66391685 + Exonic hg19 HNSC TCGA-CV-A45X-01A 2 5 Out-of-frame Intra-chr q13.3 q13.2 Tumor suppressor gene 69719 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-RHOD PPFIA1 chr11 70118542 - RHOD chr11 66833367 + Exonic hg19 BRCA TCGA-EW-A1J3-01A 331 291 In-Frame Intra-chr q13.3 q13.2 Seq+ 69720 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-SHANK2 PPFIA1 chr11 70118542 - SHANK2 chr11 70544868 - Exonic hg19 BLCA TCGA-4Z-AA7O-01A 2 4 Out-of-frame Intra-chr q13.3 q13.4 Seq+ 69721 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-SHANK2 PPFIA1 chr11 70185412 - SHANK2 chr11 70821095 - Exonic hg19 LUSC TCGA-85-A4QQ-01A 68 33 Out-of-frame Intra-chr q13.3 q13.4 Seq+ 69722 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-SHANK2 PPFIA1 chr11 70118542 - SHANK2 chr11 70666787 - Exonic hg19 BLCA TCGA-UY-A9PH-01A 21 15 Out-of-frame Intra-chr q13.3 q13.4 Seq+ 69723 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-SLC39A11 PPFIA1 chr11 70172924 - SLC39A11 chr17 71027853 - Exonic hg19 BRCA TCGA-BH-A0DD-01A 53 40 In-Frame Inter-chr q13.3 q25.1 Seq+ 69724 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-SRD5A3 PPFIA1 chr11 70176425 - SRD5A3 chr4 56225513 + Exonic hg19 SKCM TCGA-FR-A7UA-06A 5 3 Out-of-frame Inter-chr q13.3 q12 Seq+ 69725 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA1-TSKU PPFIA1 chr11 70202360 - TSKU chr11 76506653 + Exonic hg19 SKCM TCGA-DA-A3F3-06A 9 2 5'UTR-5'UTR Intra-chr q13.3 q13.5 Seq+ 69726 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA2-ACSS3 PPFIA2 chr12 81746898 - ACSS3 chr12 81647086 + Exonic hg19 SARC TCGA-3B-A9HS-01A 21 15 Out-of-frame Intra-chr q21.31 q21.31 69727 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA2-ACSS3 PPFIA2 chr12 81732959 - ACSS3 chr12 81416162 + Exonic hg19 SKCM TCGA-EB-A44Q-06A 2 4 CDS-5'UTR Intra-chr q21.31 q21.31 69728 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA2-DPY19L2 PPFIA2 chr12 82070570 - DPY19L2 chr12 63954442 - Exonic hg19 GBM TCGA-06-0129-01A 3 8 Out-of-frame Intra-chr q21.31 q14.2 Seq+ 69729 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA2-GRIP1 PPFIA2 chr12 82070570 - GRIP1 chr12 66826408 - Exonic hg19 SARC TCGA-3B-A9HL-01A 20 18 Out-of-frame Intra-chr q21.31 q14.3 Seq+ 69730 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA2-KCNMB4 PPFIA2 chr12 81719556 - KCNMB4 chr12 70824265 + Exonic hg19 SARC TCGA-DX-AB2G-01A 59 24 In-Frame Intra-chr q21.31 q15 Seq+ 69731 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA2-MGAT4C PPFIA2 chr12 82147752 - MGAT4C chr12 86727905 - Exonic hg19 SARC TCGA-3B-A9HL-01A 6 6 CDS-5'UTR Intra-chr q21.31 69732 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA2-OTOGL PPFIA2 chr12 82147752 - OTOGL chr12 80690607 + Exonic hg19 SARC TCGA-FX-A2QS-01A 50 30 In-Frame Intra-chr q21.31 q21.31 Seq+ 69733 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA2-TRHDE PPFIA2 chr12 82147752 - TRHDE chr12 72771775 + Exonic hg19 SARC TCGA-FX-A3NK-01A 26 16 In-Frame Intra-chr q21.31 q21.1 Seq+ 69734 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA3-ANK1 PPFIA3 chr19 49622979 - ANK1 chr8 41615655 - Exonic hg19 LUSC TCGA-66-2759-01A 2 1 5'UTR-CDS Inter-chr q13.33 p11.21 69735 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIA3-IZUMO1 PPFIA3 chr19 49622979 - IZUMO1 chr19 49248545 - Exonic hg19 CESC TCGA-IR-A3LK-01A 2 5 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 69736 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIBP1-ADIPOR2 PPFIBP1 chr12 27731172 - ADIPOR2 chr12 1882008 + Exonic hg19 STAD TCGA-HU-A4GC-01A 3 6 5'UTR-CDS Intra-chr p11.23 p13.33 69737 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIBP1-C12orf70 PPFIBP1 chr12 27677298 - C12orf70 chr12 27654856 + Exonic hg19 OV TCGA-24-1553-01A 3 22 5'UTR-CDS Intra-chr p11.23 Seq+ 69738 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIBP1-C12orf70 PPFIBP1 chr12 27677298 - C12orf70 chr12 27648613 + Exonic hg19 BRCA TCGA-C8-A12K-01A 7 3 5'UTR-CDS Intra-chr p11.23 Seq+ 69739 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIBP1-C12orf70 PPFIBP1 chr12 27731172 - C12orf70 chr12 27654856 + Exonic hg19 LIHC TCGA-DD-A1EK-01A 58 27 5'UTR-CDS Intra-chr p11.23 Seq+ 69740 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIBP1-CACNA1C PPFIBP1 chr12 27677298 - CACNA1C chr12 2690756 + Exonic hg19 BLCA TCGA-XF-AAMX-01A 7 2 5'UTR-CDS Intra-chr p11.23 p13.33 Seq+ 69741 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIBP1-PDILT PPFIBP1 chr12 27731172 - PDILT chr16 20381011 - Exonic hg19 BRCA TCGA-E2-A15A-06A 8 6 5'UTR-CDS Inter-chr p11.23 p12.3 Seq+ 69742 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIBP1-SLCO1B1 PPFIBP1 chr12 27677298 - SLCO1B1 chr12 21294448 + Exonic hg19 TGCT TCGA-2G-AAKH-01A 28 38 5'UTR-5'UTR Intra-chr p11.23 p12.1 Seq+ 69743 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIBP1-TSPAN11 PPFIBP1 chr12 27677298 - TSPAN11 chr12 31106915 + Exonic hg19 PAAD TCGA-IB-7890-01A 2 2 5'UTR-5'UTR Intra-chr p11.23 p11.21 Seq+ 69744 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIBP1-WNT7A PPFIBP1 chr12 27677298 - WNT7A chr3 13860920 - Exonic hg19 UCEC TCGA-EO-A3B1-01A 56 19 5'UTR-CDS Inter-chr p11.23 p25.1 Tumor suppressor gene Seq+ 69745 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPFIBP2-OLFML1 PPFIBP2 chr11 7663657 - OLFML1 chr11 7530629 + Exonic hg19 BRCA TCGA-A2-A0SW-01A 11 4 Out-of-frame Intra-chr p15.4 p15.4 Seq+ 69746 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPHLN1-KIAA0355 PPHLN1 chr12 42632463 - KIAA0355 chr19 34790584 + Exonic hg19 SARC TCGA-DX-A7EI-01A 2 1 5'UTR-5'UTR Inter-chr q12 69747 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPHLN1-TIMELESS PPHLN1 chr12 42787491 - TIMELESS chr12 56818936 - Exonic hg19 PAAD TCGA-HZ-A49I-01A 21 15 In-Frame Intra-chr q12 q13.3 Seq+ 69748 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPIF-REEP3 PPIF chr10 81107499 - REEP3 chr10 65354538 + Exonic hg19 BRCA TCGA-AN-A0AJ-01A 200 294 In-Frame Intra-chr q22.3 q21.3 Seq+ 69749 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPIF-SNX31 PPIF chr10 81111339 - SNX31 chr8 101648239 - Exonic hg19 BLCA TCGA-UY-A9PE-01A 36 14 Out-of-frame Inter-chr q22.3 q22.3 Seq+ 69750 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPIG-CRIM1 PPIG chr2 170441000 - CRIM1 chr2 36726362 + Exonic hg19 BRCA TCGA-B6-A0RI-01A 47 30 5'UTR-CDS Intra-chr q31.1 p22.2 Seq+ 69751 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPIG-FAM117B PPIG chr2 170489757 - FAM117B chr2 203589640 + Exonic hg19 LUSC TCGA-85-A4JB-01A 14 5 In-Frame Intra-chr q31.1 q33.2 Seq+ 69752 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPIG-SCN9A PPIG chr2 170441409 - SCN9A chr2 167163584 - Exonic hg19 PRAD TCGA-EJ-7115-01A 3 3 5'UTR-CDS Intra-chr q31.1 q24.3 69753 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPIH-CCDC30 PPIH chr1 43133111 - CCDC30 chr1 43047031 + Exonic hg19 SKCM TCGA-YD-A9TA-06A 6 3 3'UTR-CDS Intra-chr p34.2 p34.2 Seq+ 69754 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPIL2-KIAA1671 PPIL2 chr22 22037546 - KIAA1671 chr22 25577666 + Exonic hg19 HNSC TCGA-CV-7424-01A 2 1 In-Frame Intra-chr q11.21 q11.23 Seq+ 69755 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPIL2-TBX1 PPIL2 chr22 22029404 - TBX1 chr22 19766743 + Exonic hg19 PAAD TCGA-IB-7647-01A 5 6 In-Frame Intra-chr q11.21 q11.21 Transcription factor Seq+ 69756 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPIL4-CLEC4A PPIL4 chr6 149846279 - CLEC4A chr12 8288181 + Exonic hg19 SARC TCGA-DX-A23Y-01A 26 14 Out-of-frame Inter-chr q25.1 p13.31 Seq+ 69757 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPIP5K2-CAPN12 PPIP5K2 chr5 102456192 - CAPN12 chr19 39221863 - Exonic hg19 BLCA TCGA-G2-AA3B-01A 3 4 5'UTR-CDS Inter-chr q21.1 q13.2 69758 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPIP5K2-PRODH PPIP5K2 chr5 102509676 - PRODH chr22 18907311 - Exonic hg19 SKCM TCGA-EB-A5KH-06A 22 13 In-Frame Inter-chr q21.1 q11.21 Tumor suppressor gene Seq+ 69759 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPL-APOL3 PPL chr16 4938979 - APOL3 chr22 36538106 - Exonic hg19 LIHC TCGA-LG-A9QC-01A 4 2 Out-of-frame Inter-chr p13.3 q12.3 Seq+ 69760 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPL-UTRN PPL chr16 4932508 - UTRN chr6 144665237 + Exonic hg19 HNSC TCGA-CV-7430-01A 2 6 3'UTR-CDS Inter-chr p13.3 q24.2 69761 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPM1A-ADCK4 PPM1A chr14 60716395 - ADCK4 chr19 41220302 - Exonic hg19 LGG TCGA-P5-A5F2-01A 2 4 5'UTR-CDS Inter-chr q23.1 Tumor suppressor gene Atypical:ABC1 Seq+ 69762 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPM1B-ABCG8 PPM1B chr2 44396413 - ABCG8 chr2 44102285 + Exonic hg19 STAD TCGA-BR-8687-01A 4 20 5'UTR-CDS Intra-chr p21 p21 Seq+ 69763 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPM1B-ABCG8 PPM1B chr2 44445676 - ABCG8 chr2 44071646 + Exonic hg19 LUAD TCGA-NJ-A4YF-01A 3 3 In-Frame Intra-chr p21 p21 Seq+ 69764 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPM1B-IQCA1 PPM1B chr2 44396413 - IQCA1 chr2 237406130 - Exonic hg19 STAD TCGA-BR-8687-01A 9 29 5'UTR-CDS Intra-chr p21 q37.3 Seq+ 69765 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPM1B-MTA3 PPM1B chr2 44396413 - MTA3 chr2 42980514 + Exonic hg19 PRAD TCGA-TP-A8TV-01A 5 3 Out-of-frame Intra-chr p21 p21 Seq+ 69766 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPM1B-SRBD1 PPM1B chr2 44396413 - SRBD1 chr2 45647033 - Exonic hg19 LUSC TCGA-52-7809-01A 17 16 5'UTR-CDS Intra-chr p21 p21 Seq+ 69767 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPM1D-C17orf64 PPM1D chr17 58678247 - C17orf64 chr17 58506723 + Exonic hg19 CESC TCGA-BI-A0VR-01A 3 1 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 69768 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPM1D-NUP85 PPM1D chr17 58725443 - NUP85 chr17 73221198 + Exonic hg19 LGG TCGA-HT-7479-01A 2 2 In-Frame Intra-chr q23.2 q25.1 Seq+ 69769 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPM1D-TRIM37 PPM1D chr17 58711338 - TRIM37 chr17 57060282 - Exonic hg19 BRCA TCGA-E2-A14V-01A 196 137 Out-of-frame Intra-chr q23.2 q22 Seq+ 69770 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPM1E-SPAG5 PPM1E chr17 57043254 - SPAG5 chr17 26913200 - Exonic hg19 BRCA TCGA-OL-A5RZ-01A 27 17 In-Frame Intra-chr q22 q11.2 Seq+ 69771 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPM1E-VMP1 PPM1E chr17 56833822 - VMP1 chr17 57886157 + Exonic hg19 BRCA TCGA-C8-A12M-01A 6 18 Out-of-frame Intra-chr q22 q23.1 Seq+ 69772 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPM1G-IFT172 PPM1G chr2 27632170 - IFT172 chr2 27682696 - Exonic hg19 LUSC TCGA-94-8491-01A 10 3 Out-of-frame Intra-chr p23.3 p23.3 Seq+ 69773 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPM1G-KATNA1 PPM1G chr2 27632170 - KATNA1 chr6 149919486 - Exonic hg19 SARC TCGA-DX-A7EU-01A 24 21 In-Frame Inter-chr p23.3 q25.1 Seq+ 69774 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPM1G-LPAR1 PPM1G chr2 27609956 - LPAR1 chr9 113735838 - Exonic hg19 SARC TCGA-HS-A5NA-01A 2 2 CDS-5'UTR Inter-chr p23.3 q31.3 Seq+ 69775 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPM1H-C12orf56 PPM1H chr12 63060958 - C12orf56 chr12 64671583 - Exonic hg19 BRCA TCGA-BH-A0DD-01A 51 19 In-Frame Intra-chr q14.2 q14.2 Seq+ 69776 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPM1H-C12orf66 PPM1H chr12 63328272 - C12orf66 chr12 64609743 - Exonic hg19 LUSC TCGA-56-8625-01A 3 2 Out-of-frame Intra-chr q14.2 q14.2 Seq+ 69777 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPM1H-DYRK2 PPM1H chr12 63182006 - DYRK2 chr12 68050886 + Exonic hg19 PAAD TCGA-HZ-A49I-01A 3 2 Out-of-frame Intra-chr q14.2 q15 CMGC:DYRK Seq+ 69778 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPM1H-FAM19A2 PPM1H chr12 63328272 - FAM19A2 chr12 62104198 - Exonic hg19 BRCA TCGA-E2-A14W-01A 14 8 Out-of-frame Intra-chr q14.2 q14.1 Seq+ 69779 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPM1H-KIAA1467 PPM1H chr12 63131282 - KIAA1467 chr12 13214509 + Exonic hg19 PRAD TCGA-EJ-5524-01A 6 9 Out-of-frame Intra-chr q14.2 Seq+ 69780 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPM1H-KIF13B PPM1H chr12 63328272 - KIF13B chr8 29023289 - Exonic hg19 PRAD TCGA-KK-A8I6-01A 2 1 Out-of-frame Inter-chr q14.2 p12 69781 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPM1H-PDZRN4 PPM1H chr12 63087716 - PDZRN4 chr12 41900258 + Exonic hg19 SARC TCGA-MB-A8JL-01A 8 10 In-Frame Intra-chr q14.2 q12 Seq+ 69782 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPM1H-SLC6A15 PPM1H chr12 63131282 - SLC6A15 chr12 85264449 - Exonic hg19 BRCA TCGA-A8-A0A9-01A 44 67 In-Frame Intra-chr q14.2 q21.31 Seq+ 69783 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPM1H-SRGAP1 PPM1H chr12 63225894 - SRGAP1 chr12 64536075 + Exonic hg19 BRCA TCGA-AR-A0TX-01A 5 5 In-Frame Intra-chr q14.2 q14.2 Seq+ 69784 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPM1H-USP15 PPM1H chr12 63328272 - USP15 chr12 62687960 + Exonic hg19 BRCA TCGA-AR-A0TX-01A 13 2 In-Frame Intra-chr q14.2 q14.1 Seq+ 69785 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPM1H-WIF1 PPM1H chr12 63131282 - WIF1 chr12 65462684 - Exonic hg19 PRAD TCGA-XJ-A9DX-01A 19 10 Out-of-frame Intra-chr q14.2 q14.3 Tumor suppressor gene Seq+ 69786 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPME1-KANK1 PPME1 chr11 73882567 - KANK1 chr9 676890 + Exonic hg19 BLCA TCGA-XF-AAML-01A 5 6 CDS-5'UTR Inter-chr q13.4 p24.3 Tumor suppressor gene Seq+ 69787 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPME1-NARS2 PPME1 chr11 73915490 - NARS2 chr11 78239982 - Exonic hg19 BRCA TCGA-AN-A0AS-01A 12 3 In-Frame Intra-chr q13.4 q14.1 Seq+ 69788 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPME1-UVRAG PPME1 chr11 73965748 - UVRAG chr11 75694431 + Exonic hg19 SKCM TCGA-EB-A41B-01A 8 3 3'UTR-CDS Intra-chr q13.4 q13.5 Tumor suppressor gene Seq+ 69789 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPME1-YIF1A PPME1 chr11 73915490 - YIF1A chr11 66055147 - Exonic hg19 BLCA TCGA-E7-A85H-01A 5 7 In-Frame Intra-chr q13.4 q13.2 Seq+ 69790 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1CA-PPP2R3C PPP1CA chr11 67165654 - PPP2R3C chr14 35585943 - Exonic hg19 LUSC TCGA-98-A53A-01A 2 10 3'UTR-CDS Inter-chr q13.2 Tumor suppressor gene q13.2 69791 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1CB-BRE PPP1CB chr2 28975042 - BRE chr2 28152699 + Exonic hg19 BRCA TCGA-B6-A0RT-01A 61 23 Out-of-frame Intra-chr p23.2 Seq+ 69792 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1CB-BRE PPP1CB chr2 28975042 - BRE chr2 28521205 + Exonic hg19 ACC TCGA-OR-A5KY-01A 1057 455 In-Frame Intra-chr p23.2 Seq+ 69793 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1CB-CCT5 PPP1CB chr2 29025806 - CCT5 chr5 10250033 + Exonic hg19 UCEC TCGA-D1-A3DH-01A 2 4 Out-of-frame Inter-chr p23.2 p15.2 69794 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1CB-DRAM1 PPP1CB chr2 29016863 - DRAM1 chr12 102405591 + Exonic hg19 LUSC TCGA-51-6867-01A 12 15 Out-of-frame Inter-chr p23.2 q23.2 Seq+ 69795 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1CB-FOSL2 PPP1CB chr2 28975042 - FOSL2 chr2 28626974 + Exonic hg19 UCEC TCGA-A5-A1OH-01A 6 2 Out-of-frame Intra-chr p23.2 p23.2 Transcription factor 69796 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1CB-PI4KB PPP1CB chr2 28975042 - PI4KB chr1 151280277 - Exonic hg19 UCEC TCGA-AX-A3G3-01A 13 5 Out-of-frame Inter-chr p23.2 q21.3 Seq+ 69797 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1CB-PLB1 PPP1CB chr2 28999848 - PLB1 chr2 28796064 + Exonic hg19 OV TCGA-24-1431-01A 20 6 In-Frame Intra-chr p23.2 p23.2 Seq+ 69798 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1CB-PLB1 PPP1CB chr2 28975042 - PLB1 chr2 28804935 + Exonic hg19 BRCA TCGA-AQ-A54N-01A 12 5 Out-of-frame Intra-chr p23.2 p23.2 Seq+ 69799 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1CB-PLB1 PPP1CB chr2 29006844 - PLB1 chr2 28820872 + Exonic hg19 STAD TCGA-CD-A489-01A 2 6 Out-of-frame Intra-chr p23.2 p23.2 Seq+ 69800 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1CB-PLB1 PPP1CB chr2 28975042 - PLB1 chr2 28785908 + Exonic hg19 BRCA TCGA-E9-A243-01A 17 8 In-Frame Intra-chr p23.2 p23.2 Seq+ 69801 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1CC-KCNC2 PPP1CC chr12 111180458 - KCNC2 chr12 75434986 - Exonic hg19 SARC TCGA-DX-A23Y-01A 36 27 CDS-3'UTR Intra-chr q24.11 q21.1 Seq+ 69802 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R10-FLOT1 PPP1R10 chr6 30584255 - FLOT1 chr6 30698877 - Exonic hg19 BLCA TCGA-DK-AA6S-01A 7 2 5'UTR-CDS Intra-chr Seq+ 69803 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R10-MUS81 PPP1R10 chr6 30584255 - MUS81 chr11 65628146 + Exonic hg19 SKCM TCGA-W3-A825-06A 37 45 5'UTR-5'UTR Inter-chr q13.1 Tumor suppressor gene Seq+ 69804 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R12A-AC068775.1 PPP1R12A chr12 80266588 - AC068775.1 chr12 10675202 + Exonic hg19 DLBC TCGA-FF-8043-01A 16 4 Out-of-frame Intra-chr q21.31 p13.2 69805 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R12A-C12orf26 PPP1R12A chr12 80266588 - C12orf26 chr12 82850506 + Exonic hg19 SARC TCGA-DX-AB36-01A 70 23 In-Frame Intra-chr q21.31 69806 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R12A-DNAH10 PPP1R12A chr12 80328475 - DNAH10 chr12 124303497 + Exonic hg19 SARC TCGA-3B-A9HO-01A 6 4 In-Frame Intra-chr q21.31 69807 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R12A-IMMT PPP1R12A chr12 80328475 - IMMT chr2 86408495 - Exonic hg19 PRAD TCGA-VN-A88P-01A 3 1 In-Frame Inter-chr q21.31 p11.2 Seq+ 69808 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R12A-LIN7A PPP1R12A chr12 80214554 - LIN7A chr12 81283148 - Exonic hg19 BLCA TCGA-ZF-AA5P-01A 2 3 In-Frame Intra-chr q21.31 q21.31 Seq+ 69809 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R12A-MGAT4C PPP1R12A chr12 80239082 - MGAT4C chr12 86443501 - Exonic hg19 BRCA TCGA-A1-A0SE-01A 14 20 CDS-5'UTR Intra-chr q21.31 Seq+ 69810 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R12A-TBC1D30 PPP1R12A chr12 80328475 - TBC1D30 chr12 65179661 + Exonic hg19 LUSC TCGA-85-8276-01A 4 1 CDS-5'UTR Intra-chr q21.31 q14.3 Seq+ 69811 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R12A-XRCC6BP1 PPP1R12A chr12 80239082 - XRCC6BP1 chr12 58339411 + Exonic hg19 LUSC TCGA-43-8115-01A 14 4 In-Frame Intra-chr q21.31 Seq+ 69812 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R12B-LGR6 PPP1R12B chr1 202386045 - LGR6 chr1 202245434 + Exonic hg19 LUSC TCGA-37-4130-01A 2 1 In-Frame Intra-chr q32.1 q32.1 69813 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R12B-SUSD4 PPP1R12B chr1 202318270 - SUSD4 chr1 223408442 - Exonic hg19 LUSC TCGA-39-5040-01A 7 5 Out-of-frame Intra-chr q32.1 q41 Seq+ 69814 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R12C-CLEC11A PPP1R12C chr19 55610152 - CLEC11A chr19 51227162 + Exonic hg19 UCS TCGA-N9-A4PZ-01A 22 35 In-Frame Intra-chr q13.42 q13.33 Seq+ 69815 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R12C-KISS1 PPP1R12C chr19 55610152 - KISS1 chr1 204159925 - Exonic hg19 BRCA TCGA-A7-A6VW-01A 2 2 Out-of-frame Inter-chr q13.42 q32.1 Tumor suppressor gene Seq+ 69816 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R12C-PPP6R1 PPP1R12C chr19 55610152 - PPP6R1 chr19 55751051 - Exonic hg19 LUAD TCGA-38-4630-01A 42 42 In-Frame Intra-chr q13.42 q13.42 69817 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R12C-RPL28 PPP1R12C chr19 55623835 - RPL28 chr19 55902922 + Exonic hg19 SKCM TCGA-D3-A1Q4-06A 2 2 Out-of-frame Intra-chr q13.42 q13.42 Seq+ 69818 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R12C-ZNF233 PPP1R12C chr19 55614777 - ZNF233 chr19 44777052 + Exonic hg19 BRCA TCGA-C8-A1HI-01A 2 1 Out-of-frame Intra-chr q13.42 q13.31 Transcription factor 69819 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R12C-ZNF460 PPP1R12C chr19 55614777 - ZNF460 chr19 57795919 + Exonic hg19 BRCA TCGA-BH-A18H-01A 4 4 Out-of-frame Intra-chr q13.42 q13.43 Transcription factor Seq+ 69820 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R13B-ADAM18 PPP1R13B chr14 104313636 - ADAM18 chr8 39463826 + Exonic hg19 UCS TCGA-NA-A4QY-01A 5 4 In-Frame Inter-chr q32.33 Seq+ 69821 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R13B-C14orf2 PPP1R13B chr14 104313636 - C14orf2 chr14 104381526 - Exonic hg19 UCEC TCGA-B5-A3S1-01A 41 40 In-Frame Intra-chr q32.33 q32.33 Seq+ 69822 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R13B-C14orf2 PPP1R13B chr14 104313636 - C14orf2 chr14 104381526 - Exonic hg19 BRCA TCGA-D8-A1JM-01A 29 39 In-Frame Intra-chr q32.33 q32.33 Seq+ 69823 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R13B-CCDC88C PPP1R13B chr14 104219337 - CCDC88C chr14 91745650 - Exonic hg19 BRCA TCGA-A7-A4SF-01A 7 9 Out-of-frame Intra-chr q32.33 q32.12 Seq+ 69824 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R13B-L2HGDH PPP1R13B chr14 104313636 - L2HGDH chr14 50750751 - Exonic hg19 ESCA TCGA-JY-A6FH-01A 6 41 In-Frame Intra-chr q32.33 q21.3 Seq+ 69825 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R13B-WIBG PPP1R13B chr14 104313636 - WIBG chr12 56297264 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 30 25 Out-of-frame Inter-chr q32.33 12q13.2 Seq+ 69826 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R13B-ZP3 PPP1R13B chr14 104313636 - ZP3 chr7 76054369 + Exonic hg19 UCEC TCGA-AJ-A6NU-01A 3 1 CDS-5'UTR Inter-chr q32.33 q11.23 69827 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R13L-CCDC9 PPP1R13L chr19 45908257 - CCDC9 chr19 47769868 + Exonic hg19 PAAD TCGA-HZ-8315-01A 60 64 5'UTR-CDS Intra-chr q13.32 q13.32 Seq+ 69828 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R13L-MBOAT7 PPP1R13L chr19 45885785 - MBOAT7 chr19 54678125 - Exonic hg19 ESCA TCGA-L5-A891-01A 4 2 Out-of-frame Intra-chr q13.32 Seq+ 69829 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R13L-OPA3 PPP1R13L chr19 45895138 - OPA3 chr19 46032714 - Exonic hg19 LUAD TCGA-78-8640-01A 3 4 Out-of-frame Intra-chr q13.32 q13.32 Seq+ 69830 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R15A-EMP3 PPP1R15A chr19 49378155 - EMP3 chr19 48830087 + Exonic hg19 CESC TCGA-VS-A9UT-01A 12 5 CDS-5'UTR Intra-chr q13.33 q13.33 Seq+ 69831 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R16A-ADCK5 PPP1R16A chr8 145715595 - ADCK5 chr8 145615871 + Exonic hg19 BRCA TCGA-B6-A0I6-01A 15 12 5'UTR-CDS Intra-chr q24.3 q24.3 Atypical:ABC1 Seq+ 69832 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R16A-CLDN4 PPP1R16A chr8 145727504 - CLDN4 chr7 73245329 + Exonic hg19 PRAD TCGA-HC-7748-01A 2 1 Out-of-frame Inter-chr q24.3 q11.23 69833 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R16A-GPR172A PPP1R16A chr8 145715595 - GPR172A chr8 145583775 + Exonic hg19 ACC TCGA-OR-A5KX-01A 17 7 Out-of-frame Intra-chr q24.3 69834 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R16A-HEATR7A PPP1R16A chr8 145722836 - HEATR7A chr8 145254025 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 7 3 Out-of-frame Intra-chr q24.3 69835 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R16B-TTI1 PPP1R16B chr20 37434435 - TTI1 chr20 36642259 - Exonic hg19 BRCA TCGA-B6-A0IE-01A 2 1 5'UTR-5'UTR Intra-chr q11.23 q11.23 69836 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R1B-ANXA1 PPP1R1B chr17 37792875 - ANXA1 chr9 75772570 + Exonic hg19 BRCA TCGA-C8-A12Z-01A 2 15 Out-of-frame Inter-chr q12 Tumor suppressor gene q21.13 Tumor suppressor gene 69837 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R2-APOD PPP1R2 chr3 195269727 - APOD chr3 195296006 - Exonic hg19 ACC TCGA-OR-A5J1-01A 3 11 Out-of-frame Intra-chr q29 q29 Seq+ 69838 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R3B-CSMD1 PPP1R3B chr8 9008857 - CSMD1 chr8 3889621 - Exonic hg19 LIHC TCGA-2Y-A9H8-01A 8 3 5'UTR-CDS Intra-chr p23.1 p23.2 Tumor suppressor gene Seq+ 69839 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R3F-CCDC120 PPP1R3F chrX 49138526 - CCDC120 chrX 48921392 + Exonic hg19 LUAD TCGA-NJ-A4YF-01A 5 2 In-Frame Intra-chr p11.23 p11.23 Seq+ 69840 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP1R9A-CYP3A43 PPP1R9A chr7 94540820 - CYP3A43 chr7 99454456 + Exonic hg19 GBM TCGA-14-1402-02A 2 2 In-Frame Intra-chr q21.3 q22.1 Seq+ 69841 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2CA-CDH3 PPP2CA chr5 133561451 - CDH3 chr16 68710288 + Exonic hg19 LUAD TCGA-05-4427-01A 25 5 Out-of-frame Inter-chr q31.1 Tumor suppressor gene q22.1 Seq+ 69842 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2CA-CDKL3 PPP2CA chr5 133561451 - CDKL3 chr5 133640258 - Exonic hg19 BRCA TCGA-AO-A0JD-01A 104 27 In-Frame Intra-chr q31.1 Tumor suppressor gene q31.1 CMGC:CDKL Seq+ 69843 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2CB-DLC1 PPP2CB chr8 30669836 - DLC1 chr8 12973166 - Exonic hg19 LIHC TCGA-2Y-A9H8-01A 3 2 Out-of-frame Intra-chr p12 Tumor suppressor gene p22 Tumor suppressor gene Seq+ 69844 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2CB-PURG PPP2CB chr8 30669836 - PURG chr8 30854213 - Exonic hg19 OV TCGA-23-1032-01A 3 6 In-Frame Intra-chr p12 Tumor suppressor gene p12 Transcription factor Seq+ 69845 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2CB-PURG PPP2CB chr8 30655097 - PURG chr8 30854213 - Exonic hg19 BRCA TCGA-A2-A3XZ-01A 4 4 In-Frame Intra-chr p12 Tumor suppressor gene p12 Transcription factor Seq+ 69846 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R1A-CENPP PPP2R1A chr19 52693427 - CENPP chr9 95373596 + Exonic hg19 KIRC TCGA-A3-3328-01A 15 7 In-Frame Inter-chr q13.41 Oncogene q22.31 Seq+ 69847 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R1B-ALG9 PPP2R1B chr11 111612777 - ALG9 chr11 111680497 - Exonic hg19 LUAD TCGA-05-4420-01A 2 3 Out-of-frame Intra-chr q23.1 Tumor suppressor gene q23.1 Seq+ 69848 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R1B-ALG9 PPP2R1B chr11 111618678 - ALG9 chr11 111680497 - Exonic hg19 LIHC TCGA-DD-A73G-01A 22 21 Out-of-frame Intra-chr q23.1 Tumor suppressor gene q23.1 Seq+ 69849 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R2A-ATCAY PPP2R2A chr8 26151256 - ATCAY chr19 3913756 + Exonic hg19 ESCA TCGA-JY-A6FD-01A 6 42 Out-of-frame Inter-chr p21.2 p13.3 Seq+ 69850 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R2A-C8orf40 PPP2R2A chr8 26151256 - C8orf40 chr8 42401612 + Exonic hg19 SARC TCGA-FX-A3RE-01A 21 27 CDS-5'UTR Intra-chr p21.2 69851 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R2A-EIF3H PPP2R2A chr8 26151256 - EIF3H chr8 117671219 - Exonic hg19 SKCM TCGA-W3-AA1V-06B 20 11 In-Frame Intra-chr p21.2 q24.11 Seq+ 69852 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R2A-LGI3 PPP2R2A chr8 26212149 - LGI3 chr8 22009513 - Exonic hg19 BRCA TCGA-E2-A9RU-01A 5 4 Out-of-frame Intra-chr p21.2 p21.3 Seq+ 69853 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R2A-MTUS1 PPP2R2A chr8 26151256 - MTUS1 chr8 17504588 - Exonic hg19 PRAD TCGA-EJ-7328-01A 36 26 Out-of-frame Intra-chr p21.2 p22 Tumor suppressor gene Seq+ 69854 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R2A-ZDHHC2 PPP2R2A chr8 26151256 - ZDHHC2 chr8 17074681 + Exonic hg19 OV TCGA-25-1632-01A 34 19 In-Frame Intra-chr p21.2 p22 Tumor suppressor gene Seq+ 69855 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R2C-CTBP1 PPP2R2C chr4 6349573 - CTBP1 chr4 1207393 - Exonic hg19 LGG TCGA-DH-A669-01A 13 7 Out-of-frame Intra-chr p16.1 Tumor suppressor gene p16.3 Seq+ 69856 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R3A-SPSB4 PPP2R3A chr3 135822218 - SPSB4 chr3 140865984 + Exonic hg19 LUSC TCGA-52-7810-01A 10 7 Out-of-frame Intra-chr q22.2 q23 Seq+ 69857 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R3C-NFKBIA PPP2R3C chr14 35557157 - NFKBIA chr14 35871266 - Exonic hg19 BRCA TCGA-A8-A07U-01A 2 5 In-Frame Intra-chr q13.2 q13.2 Seq+ 69858 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R4-AGTPBP1 PPP2R4 chr9 131873910 - AGTPBP1 chr9 88257858 - Exonic hg19 KIRP TCGA-V9-A7HT-01A 3 2 Out-of-frame Intra-chr Tumor suppressor gene q21.33 69859 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R4-CRAT PPP2R4 chr9 131873910 - CRAT chr9 131866585 - Exonic hg19 STAD TCGA-BR-8080-01A 2 9 Out-of-frame Intra-chr Tumor suppressor gene q34.11 Seq+ 69860 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R4-FAM73B PPP2R4 chr9 131901928 - FAM73B chr9 131831355 + Exonic hg19 BRCA TCGA-OL-A5D6-01A 25 11 Out-of-frame Intra-chr Tumor suppressor gene Seq+ 69861 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R4-NEK6 PPP2R4 chr9 131904831 - NEK6 chr9 127074788 + Exonic hg19 LUAD TCGA-MP-A4T6-01A 4 2 In-Frame Intra-chr Tumor suppressor gene q33.3 Other:NEK 69862 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R4-NUP188 PPP2R4 chr9 131891389 - NUP188 chr9 131730785 + Exonic hg19 BRCA TCGA-AC-A23H-01A 38 18 In-Frame Intra-chr Tumor suppressor gene q34.11 Seq+ 69863 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R4-PAX5 PPP2R4 chr9 131911224 - PAX5 chr9 37034103 - Exonic hg19 SARC TCGA-IE-A3OV-01A 2 3 Out-of-frame Intra-chr Tumor suppressor gene p13.2 Oncogene Tumor suppressor gene Transcription factor 69864 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R5A-SPATA17 PPP2R5A chr1 212522584 - SPATA17 chr1 218040364 + Exonic hg19 TGCT TCGA-2G-AALF-01A 7 2 CDS-3'UTR Intra-chr q32.3 q41 Seq+ 69865 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R5B-C11orf85 PPP2R5B chr11 64699340 - C11orf85 chr11 64708118 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 4 2 Out-of-frame Intra-chr q13.1 69866 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R5B-KDM2A PPP2R5B chr11 64685112 - KDM2A chr11 66982811 + Exonic hg19 BRCA TCGA-E2-A1IU-01A 5 4 5'UTR-5'UTR Intra-chr q13.1 q13.2 Transcription factor Seq+ 69867 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R5C-CCDC28B PPP2R5C chr14 102360897 - CCDC28B chr1 32667514 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 2 7 CDS-5'UTR Inter-chr q32.31 Tumor suppressor gene p35.2 Seq+ 69868 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R5C-FOXN3 PPP2R5C chr14 102323222 - FOXN3 chr14 89953015 - Exonic hg19 STAD TCGA-IN-AB1X-01A 3 16 Out-of-frame Intra-chr q32.31 Tumor suppressor gene q32.11 Transcription factor Seq+ 69869 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R5C-PRKD1 PPP2R5C chr14 102276373 - PRKD1 chr14 30069023 - Exonic hg19 ACC TCGA-OR-A5J9-01A 14 2 Out-of-frame Intra-chr q32.31 Tumor suppressor gene q12 Seq+ 69870 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R5C-SCN1B PPP2R5C chr14 102276373 - SCN1B chr19 35523432 + Exonic hg19 BRCA TCGA-B6-A0RT-01A 17 6 In-Frame Inter-chr q32.31 Tumor suppressor gene q13.11 Seq+ 69871 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R5C-UPF2 PPP2R5C chr14 102252520 - UPF2 chr10 12001355 - Exonic hg19 BRCA TCGA-B6-A0RS-01A 7 10 Out-of-frame Inter-chr q32.31 Tumor suppressor gene p14 Seq+ 69872 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R5D-ASCC3 PPP2R5D chr6 42957426 - ASCC3 chr6 101215221 - Exonic hg19 BRCA TCGA-BH-A0BO-01A 5 3 In-Frame Intra-chr p21.1 q16.3 Seq+ 69873 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R5D-KIAA0240 PPP2R5D chr6 42957426 - KIAA0240 chr6 42819830 + Exonic hg19 LUSC TCGA-96-7544-01A 8 2 In-Frame Intra-chr p21.1 69874 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R5D-KIAA0240 PPP2R5D chr6 42957426 - KIAA0240 chr6 42789756 + Exonic hg19 READ TCGA-AH-6549-01A 4 1 CDS-5'UTR Intra-chr p21.1 69875 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R5D-UBR2 PPP2R5D chr6 42957426 - UBR2 chr6 42652532 + Exonic hg19 BLCA TCGA-FD-A3SJ-01A 71 35 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 69876 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R5E-C14orf39 PPP2R5E chr14 64006247 - C14orf39 chr14 60966148 - Exonic hg19 LIHC TCGA-CC-5261-01A 6 3 CDS-5'UTR Intra-chr q23.2 q23.1 Seq+ 69877 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP2R5E-PLEKHH1 PPP2R5E chr14 63920407 - PLEKHH1 chr14 68008551 + Exonic hg19 LUSC TCGA-22-4593-01A 10 5 CDS-5'UTR Intra-chr q23.2 q24.1 Seq+ 69878 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP3CA-BRD2 PPP3CA chr4 101945485 - BRD2 chr6 32944339 + Exonic hg19 PRAD TCGA-CH-5790-01A 2 1 3'UTR-CDS Inter-chr q24 Atypical:BRD 69879 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP3CA-COL25A1 PPP3CA chr4 102267896 - COL25A1 chr4 109895715 - Exonic hg19 BRCA TCGA-D8-A1X5-01A 6 3 Out-of-frame Intra-chr q24 q25 Seq+ 69880 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP3CA-HMGXB3 PPP3CA chr4 102267896 - HMGXB3 chr5 149406269 + Exonic hg19 SARC TCGA-DX-A3UA-01A 5 1 Out-of-frame Inter-chr q24 q32 Seq+ 69881 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP3CA-INTS12 PPP3CA chr4 102117073 - INTS12 chr4 106604474 - Exonic hg19 PRAD TCGA-HC-8266-01A 7 4 Out-of-frame Intra-chr q24 q24 Seq+ 69882 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP3CA-PPIL1 PPP3CA chr4 102267896 - PPIL1 chr6 36839648 - Exonic hg19 PRAD TCGA-HC-8266-01A 4 2 Out-of-frame Inter-chr q24 p21.2 Seq+ 69883 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP3CA-SEPT11 PPP3CA chr4 102267896 - SEPT11 chr4 77917578 + Exonic hg19 PRAD TCGA-VP-A87K-01A 7 7 Out-of-frame Intra-chr q24 q21.1 Seq+ 69884 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP3CA-SPARCL1 PPP3CA chr4 102267896 - SPARCL1 chr4 88420737 - Exonic hg19 BRCA TCGA-E2-A14N-01A 4 2 CDS-5'UTR Intra-chr q24 q22.1 Tumor suppressor gene Seq+ 69885 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP3CB-VMP1 PPP3CB chr10 75227311 - VMP1 chr17 57808782 + Exonic hg19 LIHC TCGA-DD-A1EB-01A 30 7 CDS-5'UTR Inter-chr q22.2 q23.1 Seq+ 69886 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP3CC-PIWIL2 PPP3CC chr8 22298971 - PIWIL2 chr8 22210472 + Exonic hg19 STAD TCGA-BR-7716-01A 3 14 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.3 Tumor suppressor gene Seq+ 69887 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP3CC-PIWIL2 PPP3CC chr8 22333137 - PIWIL2 chr8 22138633 + Exonic hg19 HNSC TCGA-CN-4731-01A 24 11 In-Frame Intra-chr p21.3 Tumor suppressor gene p21.3 Tumor suppressor gene Seq+ 69888 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP3CC-PIWIL2 PPP3CC chr8 22370945 - PIWIL2 chr8 22210472 + Exonic hg19 MESO TCGA-TS-A7P7-01A 9 8 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.3 Tumor suppressor gene Seq+ 69889 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP3R1-CNRIP1 PPP3R1 chr2 68413600 - CNRIP1 chr2 68544439 - Exonic hg19 LUAD TCGA-55-6972-01A 3 1 Out-of-frame Intra-chr p14 p14 Seq+ 69890 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP3R1-SPATS2L PPP3R1 chr2 68444224 - SPATS2L chr2 201305372 + Exonic hg19 LUAD TCGA-73-4676-01A 14 12 In-Frame Intra-chr p14 q33.1 Seq+ 69891 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP3R1-TTC27 PPP3R1 chr2 68479257 - TTC27 chr2 33007693 + Exonic hg19 BRCA TCGA-A2-A0YG-01A 4 2 In-Frame Intra-chr p14 p22.3 Seq+ 69892 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP3R1-WDPCP PPP3R1 chr2 68444224 - WDPCP chr2 63631792 - Exonic hg19 PRAD TCGA-M7-A721-01A 4 1 Out-of-frame Intra-chr p14 p15 69893 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP4R1-CCNB3 PPP4R1 chr18 9614476 - CCNB3 chrX 50051505 + Exonic hg19 BRCA TCGA-A2-A3Y0-01A 7 1 Out-of-frame Inter-chr p11.22 p11.22 69894 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP4R1-DPP4 PPP4R1 chr18 9561978 - DPP4 chr2 162851882 - Exonic hg19 UCEC TCGA-EY-A3L3-01A 24 9 In-Frame Inter-chr p11.22 q24.2 Tumor suppressor gene Seq+ 69895 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP4R1-NUP93 PPP4R1 chr18 9614224 - NUP93 chr16 56857619 + Exonic hg19 SARC TCGA-VT-A80G-01A 45 24 Out-of-frame Inter-chr p11.22 q13 Seq+ 69896 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP4R1-PAWR PPP4R1 chr18 9570155 - PAWR chr12 80014987 - Exonic hg19 CESC TCGA-FU-A3TX-01A 30 13 Out-of-frame Inter-chr p11.22 q21.2 Tumor suppressor gene Seq+ 69897 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP4R1L-NCOA6 PPP4R1L chr20 56846419 - NCOA6 chr20 33380366 - Exonic hg19 BRCA TCGA-EW-A1PF-01A 4 2 3'UTR-5'UTR Intra-chr q13.32 q11.22 Seq+ 69898 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP4R2-FBXW7 PPP4R2 chr3 73047309 - FBXW7 chr4 153333024 - Exonic hg19 SARC TCGA-DX-A1KY-01A 7 1 CDS-5'UTR Inter-chr p13 q31.3 Oncogene Tumor suppressor gene Seq+ 69899 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP4R2-FOXP1 PPP4R2 chr3 73047309 - FOXP1 chr3 71161788 - Exonic hg19 BRCA TCGA-AN-A0XT-01A 6 17 Out-of-frame Intra-chr p13 p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 69900 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP4R4-MYH6 PPP4R4 chr14 94642464 - MYH6 chr14 23855340 - Exonic hg19 BLCA TCGA-XF-AAMW-01A 2 2 Out-of-frame Intra-chr q32.12 q11.2 Seq+ 69901 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP5C-AP2S1 PPP5C chr19 46857246 - AP2S1 chr19 47349399 - Exonic hg19 ESCA TCGA-L5-A43J-01A 5 92 In-Frame Intra-chr q13.32 q13.32 Seq+ 69902 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6C-C11orf84 PPP6C chr9 127933364 - C11orf84 chr11 63594400 + Exonic hg19 GBM TCGA-28-1753-01A 2 2 Out-of-frame Inter-chr q33.3 q13.1 Seq+ 69903 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R1-AURKC PPP6R1 chr19 55769803 - AURKC chr19 57743401 + Exonic hg19 BRCA TCGA-AO-A03V-01A 6 14 5'UTR-CDS Intra-chr q13.42 q13.43 Oncogene Seq+ 69904 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R2-AURKC PPP6R2 chr22 50862043 - AURKC chr19 57743110 + Exonic hg19 SARC TCGA-DX-A6YR-01A 2 5 Out-of-frame Inter-chr q13.33 q13.43 Oncogene Seq+ 69905 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R2-CBX1 PPP6R2 chr22 50845304 - CBX1 chr17 46152462 - Exonic hg19 LIHC TCGA-BC-A3KG-01A 9 8 In-Frame Inter-chr q13.33 q21.32 Seq+ 69906 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R2-EMID1 PPP6R2 chr22 50845304 - EMID1 chr22 29621122 + Exonic hg19 BRCA TCGA-A2-A1G1-01A 15 7 Out-of-frame Intra-chr q13.33 q12.2 Seq+ 69907 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R2-RP3-402G11.5 PPP6R2 chr22 50810579 - RP3-402G11.5 chr22 50654146 + Exonic hg19 BLCA TCGA-E7-A5KE-01A 54 38 Out-of-frame Intra-chr q13.33 69908 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R2-SAMM50 PPP6R2 chr22 50860809 - SAMM50 chr22 44368116 + Exonic hg19 THYM TCGA-XM-A8R9-01A 3 1 Out-of-frame Intra-chr q13.33 q13.31 69909 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R2-TRABD PPP6R2 chr22 50781979 - TRABD chr22 50631456 + Exonic hg19 SKCM TCGA-FS-A1ZD-06A 15 15 5'UTR-5'UTR Intra-chr q13.33 q13.33 Seq+ 69910 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R2-ZDHHC6 PPP6R2 chr22 50845304 - ZDHHC6 chr10 114190665 - Exonic hg19 UCS TCGA-N5-A4RT-01A 109 43 Out-of-frame Inter-chr q13.33 q25.2 Seq+ 69911 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R3-ACER3 PPP6R3 chr11 68305359 - ACER3 chr11 76687333 + Exonic hg19 SKCM TCGA-YG-AA3P-06A 35 25 Out-of-frame Intra-chr q13.2 q13.5 Seq+ 69912 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R3-ARHGAP1 PPP6R3 chr11 68228295 - ARHGAP1 chr11 46717706 - Exonic hg19 LUSC TCGA-43-6771-01A 58 56 5'UTR-5'UTR Intra-chr q13.2 p11.2 Seq+ 69913 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R3-ATP6V0D2 PPP6R3 chr11 68228295 - ATP6V0D2 chr8 87100629 + Exonic hg19 SARC TCGA-K1-A6RT-01A 5 4 Out-of-frame Inter-chr q13.2 q21.3 Seq+ 69914 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R3-EIF4G3 PPP6R3 chr11 68331900 - EIF4G3 chr1 21144031 - Exonic hg19 SKCM TCGA-FR-A3YO-06A 5 1 In-Frame Inter-chr q13.2 p36.12 69915 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R3-FADD PPP6R3 chr11 68228295 - FADD chr11 70052239 + Exonic hg19 BRCA TCGA-E2-A15A-01A 21 6 5'UTR-CDS Intra-chr q13.2 q13.3 Tumor suppressor gene Seq+ 69916 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R3-LRP5 PPP6R3 chr11 68228295 - LRP5 chr11 68213904 + Exonic hg19 LUSC TCGA-18-4083-01A 6 6 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 69917 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R3-LRP5 PPP6R3 chr11 68363686 - LRP5 chr11 68115315 + Exonic hg19 LIHC TCGA-DD-AAEG-01A 7 8 In-Frame Intra-chr q13.2 q13.2 Seq+ 69918 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R3-LRP5 PPP6R3 chr11 68318654 - LRP5 chr11 68170951 + Exonic hg19 PAAD TCGA-IB-A7LX-01A 20 19 In-Frame Intra-chr q13.2 q13.2 Seq+ 69919 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R3-LRP5 PPP6R3 chr11 68287119 - LRP5 chr11 68204357 + Exonic hg19 LUSC TCGA-NC-A5HQ-01A 5 1 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 69920 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R3-LRP5 PPP6R3 chr11 68228295 - LRP5 chr11 68204357 + Exonic hg19 ACC TCGA-OR-A5J1-01A 3 1 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 69921 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R3-MGAM PPP6R3 chr11 68312492 - MGAM chr7 141705329 + Exonic hg19 LUSC TCGA-O2-A5IB-01A 4 7 CDS-5'UTR Inter-chr q13.2 Seq+ 69922 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R3-MTL5 PPP6R3 chr11 68228295 - MTL5 chr11 68483407 - Exonic hg19 BRCA TCGA-OL-A5RZ-01A 6 2 5'UTR-CDS Intra-chr q13.2 69923 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R3-POLD3 PPP6R3 chr11 68228295 - POLD3 chr11 74305106 + Exonic hg19 BRCA TCGA-A1-A0SQ-01A 11 19 5'UTR-5'UTR Intra-chr q13.2 q13.4 Seq+ 69924 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R3-RHOD PPP6R3 chr11 68272739 - RHOD chr11 66833367 + Exonic hg19 STAD TCGA-D7-A6F0-01A 6 48 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 69925 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R3-SHANK2 PPP6R3 chr11 68343511 - SHANK2 chr11 70858384 - Exonic hg19 BLCA TCGA-FD-A62S-01A 41 30 CDS-5'UTR Intra-chr q13.2 q13.4 Seq+ 69926 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R3-SPTBN2 PPP6R3 chr11 68228295 - SPTBN2 chr11 66483452 - Exonic hg19 BRCA TCGA-GM-A3NW-01A 4 2 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 69927 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R3-SSH2 PPP6R3 chr11 68321725 - SSH2 chr17 28030080 - Exonic hg19 BRCA TCGA-C8-A1HK-01A 49 49 In-Frame Inter-chr q13.2 q11.2 Seq+ 69928 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R3-SSH3 PPP6R3 chr11 68287119 - SSH3 chr11 67074309 + Exonic hg19 PAAD TCGA-IB-7654-01A 39 35 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 69929 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPP6R3-YAP1 PPP6R3 chr11 68326147 - YAP1 chr11 102098200 + Exonic hg19 BLCA TCGA-BT-A20N-01A 28 16 In-Frame Intra-chr q13.2 q22.1 Tumor suppressor gene Seq+ 69930 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPPDE1-C1orf101 PPPDE1 chr1 244816657 - C1orf101 chr1 244798791 + Exonic hg19 HNSC TCGA-CN-6992-01A 4 8 In-Frame Intra-chr 69931 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPPDE1-PGBD5 PPPDE1 chr1 244816657 - PGBD5 chr1 230493067 - Exonic hg19 SKCM TCGA-3N-A9WC-06A 8 17 Out-of-frame Intra-chr q42.13 69932 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPT1-HIVEP3 PPT1 chr1 40555082 - HIVEP3 chr1 42166666 - Exonic hg19 UCS TCGA-N7-A59B-01A 4 1 CDS-5'UTR Intra-chr p34.2 p34.2 Tumor suppressor gene Transcription factor Seq+ 69933 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPT2-TNF PPT2 chr6 32122181 - TNF chr6 31544311 + Exonic hg19 UCEC TCGA-B5-A5OD-01A 18 14 5'UTR-CDS Intra-chr Seq+ 69934 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPTC7-ALS2CR12 PPTC7 chr12 111020614 - ALS2CR12 chr2 202173973 - Exonic hg19 BRCA TCGA-A8-A07U-01A 10 22 Out-of-frame Inter-chr q24.11 q33.1 Seq+ 69935 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPTC7-HVCN1 PPTC7 chr12 110989594 - HVCN1 chr12 111065981 - Exonic hg19 BRCA TCGA-C8-A26X-01A 204 157 CDS-3'UTR Intra-chr q24.11 q24.11 Seq+ 69936 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPTC7-HVCN1 PPTC7 chr12 110983685 - HVCN1 chr12 111065981 - Exonic hg19 UCS TCGA-N9-A4Q7-01A 21 7 CDS-3'UTR Intra-chr q24.11 q24.11 Seq+ 69937 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PPTC7-RP11-24B21.1 PPTC7 chr12 110977627 - RP11-24B21.1 chr12 92387305 - Exonic hg19 BRCA TCGA-AQ-A54N-01A 4 2 Out-of-frame Intra-chr q24.11 69938 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PQLC1-HSBP1L1 PQLC1 chr18 77703329 - HSBP1L1 chr18 77726612 + Exonic hg19 HNSC TCGA-CV-7434-01A 133 72 Out-of-frame Intra-chr q23 q23 Seq+ 69939 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PQLC1-PARD6G PQLC1 chr18 77703329 - PARD6G chr18 77960815 - Exonic hg19 STAD TCGA-BR-4366-01A 9 4 Out-of-frame Intra-chr q23 q23 69940 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRAME-ACO2 PRAME chr22 22899232 - ACO2 chr22 41903795 + Exonic hg19 SKCM TCGA-BF-A5EQ-01A 101 25 CDS-5'UTR Intra-chr q13.2 Seq+ 69941 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRAME-HDLBP PRAME chr22 22890128 - HDLBP chr2 242202277 - Exonic hg19 SKCM TCGA-EB-A3Y6-01A 2 17 Out-of-frame Inter-chr q37.3 69942 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRC1-VPS33B PRC1 chr15 91527923 - VPS33B chr15 91561115 - Exonic hg19 OV TCGA-25-2397-01A 2 2 In-Frame Intra-chr q26.1 q26.1 Seq+ 69943 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRCC-HAPLN2 PRCC chr1 156738031 - HAPLN2 chr1 156593259 + Exonic hg19 BRCA TCGA-BH-A0BZ-01A 11 13 CDS-5'UTR Intra-chr q23.1 q23.1 Seq+ 69944 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRCC-RHBG PRCC chr1 156738031 - RHBG chr1 156352539 + Exonic hg19 LUAD TCGA-49-AARE-01A 10 16 Out-of-frame Intra-chr q23.1 q22 Seq+ 69945 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRCC-RRNAD1 PRCC chr1 156738031 - RRNAD1 chr1 156701783 + Exonic hg19 UCEC TCGA-AJ-A3EJ-01A 3 4 In-Frame Intra-chr q23.1 q23.1 Seq+ 69946 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRCC-TFE3 PRCC chr1 156738031 - TFE3 chrX 48895967 - Exonic hg19 KIRP TCGA-BQ-5882-01A 105 77 In-Frame Inter-chr q23.1 p11.23 Oncogene Transcription factor KB Pub Seq+ 69947 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRCC-TFE3 PRCC chr1 156738031 - TFE3 chrX 48895967 - Exonic hg19 KIRP TCGA-BQ-5887-01A 33 25 In-Frame Inter-chr q23.1 p11.23 Oncogene Transcription factor KB Pub Seq+ 69948 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRCC-TFE3 PRCC chr1 156738031 - TFE3 chrX 48895967 - Exonic hg19 KIRP TCGA-BQ-7050-01A 64 58 In-Frame Inter-chr q23.1 p11.23 Oncogene Transcription factor KB Pub Seq+ 69949 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRCC-TMED5 PRCC chr1 156738031 - TMED5 chr1 93625783 - Exonic hg19 THCA TCGA-ET-A40S-01A 16 8 In-Frame Intra-chr q23.1 p22.1 Seq+ 69950 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRCP-DLG2 PRCP chr11 82564219 - DLG2 chr11 83810090 - Exonic hg19 SKCM TCGA-FS-A1ZS-06A 8 6 In-Frame Intra-chr q14.1 q14.1 Seq+ 69951 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRCP-RAB30 PRCP chr11 82611277 - RAB30 chr11 82698812 - Exonic hg19 BRCA TCGA-D8-A27H-01A 12 6 In-Frame Intra-chr q14.1 q14.1 Seq+ 69952 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRCP-RAB30 PRCP chr11 82611277 - RAB30 chr11 82705164 - Exonic hg19 PRAD TCGA-EJ-8468-01A 6 13 In-Frame Intra-chr q14.1 q14.1 Seq+ 69953 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRDM1-SLC22A16 PRDM1 chr6 106554374 - SLC22A16 chr6 110763978 - Exonic hg19 BRCA TCGA-A2-A04V-01A 4 1 In-Frame Intra-chr q21 Oncogene Tumor suppressor gene Transcription factor q21 Seq+ 69954 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRDM10-NT5E PRDM10 chr11 129788434 - NT5E chr6 86194953 + Exonic hg19 LIHC TCGA-UB-A7ME-01A 5 2 Out-of-frame Inter-chr q24.3 Transcription factor q14.3 69955 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRDM11-ACCS PRDM11 chr11 45204674 - ACCS chr11 44089178 + Exonic hg19 BRCA TCGA-EW-A3U0-01A 6 2 5'UTR-5'UTR Intra-chr p11.2 Tumor suppressor gene p11.2 Seq+ 69956 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRDM11-MRPS9 PRDM11 chr11 45169132 - MRPS9 chr2 105687771 + Exonic hg19 BRCA TCGA-AN-A0FT-01A 5 10 5'UTR-CDS Inter-chr p11.2 Tumor suppressor gene q12.1 Seq+ 69957 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRDM16-BBX PRDM16 chr1 2985860 - BBX chr3 107364683 + Exonic hg19 BRCA TCGA-E9-A1RH-01A 3 2 CDS-5'UTR Inter-chr p36.32 Transcription factor q13.12 Transcription factor Seq+ 69958 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRDM16-NARS2 PRDM16 chr1 2985860 - NARS2 chr11 78282489 - Exonic hg19 BRCA TCGA-AN-A0G0-01A 8 5 Out-of-frame Inter-chr p36.32 Transcription factor q14.1 Seq+ 69959 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRDM2-LRRC38 PRDM2 chr1 14075982 - LRRC38 chr1 13802567 - Exonic hg19 THYM TCGA-ZB-A969-01A 9 6 In-Frame Intra-chr p36.21 Tumor suppressor gene Transcription factor p36.21 Seq+ 69960 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRDM6-NIPAL4 PRDM6 chr5 122495332 - NIPAL4 chr5 156890102 + Exonic hg19 KIRC TCGA-BP-4986-01A 6 5 In-Frame Intra-chr q23.2 Transcription factor q33.3 Seq+ 69961 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRDX1-DDX27 PRDX1 chr1 45976719 - DDX27 chr20 47849303 + Exonic hg19 LUSC TCGA-94-7557-01A 2 27 Out-of-frame Inter-chr p34.1 q13.13 69962 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRDX6-CLCN3 PRDX6 chr1 173457946 - CLCN3 chr4 170623929 + Exonic hg19 CESC TCGA-EA-A3HS-01A 2 2 Out-of-frame Inter-chr q25.1 q33 69963 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRELID2-MEGF10 PRELID2 chr5 145144494 - MEGF10 chr5 126769055 + Exonic hg19 LUSC TCGA-77-A5GA-01A 2 1 3'UTR-CDS Intra-chr q32 q23.2 69964 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PREP-AIM1 PREP chr6 105729621 - AIM1 chr6 107003643 + Exonic hg19 BRCA TCGA-C8-A137-01A 25 44 In-Frame Intra-chr q21 Seq+ 69965 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PREP-ATG5 PREP chr6 105816778 - ATG5 chr6 106696119 - Exonic hg19 LUAD TCGA-78-7153-01A 5 1 Out-of-frame Intra-chr q21 q21 69966 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PREP-C18orf1 PREP chr6 105845728 - C18orf1 chr18 13621116 + Exonic hg19 BRCA TCGA-E2-A14V-01A 9 12 Out-of-frame Inter-chr q21 69967 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PREP-DCBLD1 PREP chr6 105771540 - DCBLD1 chr6 117824930 + Exonic hg19 BRCA TCGA-A2-A04W-01A 20 12 Out-of-frame Intra-chr q21 q22.1 Seq+ 69968 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PREP-PLN PREP chr6 105845728 - PLN chr6 118879988 + Exonic hg19 BRCA TCGA-B6-A0RT-01A 22 11 CDS-5'UTR Intra-chr q21 q22.31 Seq+ 69969 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PREP-PTPRK PREP chr6 105729621 - PTPRK chr6 128643455 - Exonic hg19 HNSC TCGA-MT-A7BN-01A 6 1 Out-of-frame Intra-chr q21 Tumor suppressor gene Seq+ 69970 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PREX1-EHBP1 PREX1 chr20 47444179 - EHBP1 chr2 62934032 + Exonic hg19 BRCA TCGA-AO-A1KS-01A 11 9 CDS-5'UTR Inter-chr q13.13 p15 Seq+ 69971 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PREX1-MFN1 PREX1 chr20 47240793 - MFN1 chr3 179096011 + Exonic hg19 BRCA TCGA-D8-A1JI-01A 2 7 3'UTR-CDS Inter-chr q13.13 q26.33 69972 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRICKLE1-FGD4 PRICKLE1 chr12 42983267 - FGD4 chr12 32791589 + Exonic hg19 BRCA TCGA-AR-A1AH-01A 4 7 5'UTR-CDS Intra-chr q12 Tumor suppressor gene p11.21 Seq+ 69973 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRICKLE1-LRIG3 PRICKLE1 chr12 42983267 - LRIG3 chr12 59284578 - Exonic hg19 SARC TCGA-DX-A7EI-01A 49 66 5'UTR-CDS Intra-chr q12 Tumor suppressor gene q14.1 Tumor suppressor gene Seq+ 69974 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRICKLE1-RP11-511B23.3 PRICKLE1 chr12 42983267 - RP11-511B23.3 chr12 93569676 + Exonic hg19 SARC TCGA-DX-A7EI-01A 22 20 Out-of-frame Intra-chr q12 Tumor suppressor gene 69975 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRICKLE2-ADAMTS9 PRICKLE2 chr3 64210586 - ADAMTS9 chr3 64644467 - Exonic hg19 SKCM TCGA-D3-A3BZ-06A 3 3 5'UTR-CDS Intra-chr p14.1 p14.1 Tumor suppressor gene 69976 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRICKLE3-CACNA1F PRICKLE3 chrX 49040187 - CACNA1F chrX 49065853 - Exonic hg19 BRCA TCGA-E2-A15A-01A 17 6 In-Frame Intra-chr p11.23 p11.23 Seq+ 69977 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKAA2-USP24 PRKAA2 chr1 57111154 - USP24 chr1 55541196 - Exonic hg19 SKCM TCGA-EE-A2MD-06A 13 2 Out-of-frame Intra-chr p32.2 Tumor suppressor gene p32.3 Seq+ 69978 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKAB2-FBP2 PRKAB2 chr1 146643568 - FBP2 chr9 97349751 - Exonic hg19 KIRC TCGA-CZ-5452-01A 8 10 Out-of-frame Inter-chr q21.1 q22.32 Seq+ 69979 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKAG2-ACTR3C PRKAG2 chr7 151372506 - ACTR3C chr7 149946143 - Exonic hg19 LIHC TCGA-2Y-A9HA-01A 2 1 In-Frame Intra-chr q36.1 q36.1 Seq+ 69980 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKAG2-ADCK2 PRKAG2 chr7 151573592 - ADCK2 chr7 140374411 + Exonic hg19 LUAD TCGA-97-A4M1-01A 3 1 In-Frame Intra-chr q36.1 q34 Atypical:ABC1 Seq+ 69981 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKAG2-CA10 PRKAG2 chr7 151329155 - CA10 chr17 50149753 - Exonic hg19 BRCA TCGA-AN-A0XU-01A 2 7 In-Frame Inter-chr q36.1 q22 Seq+ 69982 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKAG2-CCDC132 PRKAG2 chr7 151573592 - CCDC132 chr7 92970739 + Exonic hg19 BRCA TCGA-B6-A2IU-01A 10 13 In-Frame Intra-chr q36.1 Seq+ 69983 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKAG2-MLL3 PRKAG2 chr7 151329155 - MLL3 chr7 151834009 - Exonic hg19 BRCA TCGA-AO-A12E-01A 2 5 Out-of-frame Intra-chr q36.1 Tumor suppressor gene Seq+ 69984 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKAG2-MLL3 PRKAG2 chr7 151372506 - MLL3 chr7 151860911 - Exonic hg19 PRAD TCGA-EJ-A46G-01A 4 1 In-Frame Intra-chr q36.1 Tumor suppressor gene Seq+ 69985 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKAG2-MLL3 PRKAG2 chr7 151292431 - MLL3 chr7 151877211 - Exonic hg19 PRAD TCGA-ZG-A9KY-01A 3 3 In-Frame Intra-chr q36.1 Tumor suppressor gene Seq+ 69986 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKAG2-ORC5 PRKAG2 chr7 151329155 - ORC5 chr7 103808973 - Exonic hg19 OV TCGA-13-0760-01A 3 3 Out-of-frame Intra-chr q36.1 q22.2 Seq+ 69987 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKAG2-WASL PRKAG2 chr7 151292431 - WASL chr7 123349277 - Exonic hg19 MESO TCGA-UT-A88C-01B 40 24 In-Frame Intra-chr q36.1 q31.32 Seq+ 69988 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKAR1A-FOXP1 PRKAR1A chr17 66528899 - FOXP1 chr3 71007472 - Exonic hg19 LUAD TCGA-78-7149-01A 2 15 Out-of-frame Inter-chr q24.2 Oncogene Tumor suppressor gene p13 Oncogene Tumor suppressor gene Transcription factor 69989 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKAR1A-PITPNC1 PRKAR1A chr17 66511717 - PITPNC1 chr17 65528918 + Exonic hg19 COAD TCGA-D5-6929-01A 57 28 In-Frame Intra-chr q24.2 Oncogene Tumor suppressor gene q24.2 Seq+ 69990 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKAR2A-CACNA1D PRKAR2A chr3 48845082 - CACNA1D chr3 53769401 + Exonic hg19 PRAD TCGA-2A-A8VV-01A 3 3 Out-of-frame Intra-chr p21.31 p21.1 69991 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKAR2A-CACNA2D3 PRKAR2A chr3 48884768 - CACNA2D3 chr3 54537519 + Exonic hg19 THYM TCGA-ZB-A96L-01A 11 6 Out-of-frame Intra-chr p21.31 p21.1 Tumor suppressor gene Seq+ 69992 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKAR2A-SLC25A20 PRKAR2A chr3 48884768 - SLC25A20 chr3 48929505 - Exonic hg19 BRCA TCGA-B6-A3ZX-01A 2 1 Out-of-frame Intra-chr p21.31 p21.31 69993 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKAR2A-SLC25A20 PRKAR2A chr3 48845082 - SLC25A20 chr3 48929505 - Exonic hg19 ACC TCGA-OR-A5JZ-01A 8 4 Out-of-frame Intra-chr p21.31 p21.31 69994 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKAR2B-HMCN1 PRKAR2B chr7 106710761 - HMCN1 chr1 185815158 + Exonic hg19 LUSC TCGA-22-4593-01A 2 2 In-Frame Inter-chr q25.3 69995 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKCA-CDH8 PRKCA chr17 64685165 - CDH8 chr16 61935377 - Exonic hg19 BRCA TCGA-AC-A5XU-01A 3 2 In-Frame Inter-chr q24.2 q21 Seq+ 69996 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKCA-CEP112 PRKCA chr17 64492401 - CEP112 chr17 63848152 - Exonic hg19 STAD TCGA-VQ-A925-01A 2 11 In-Frame Intra-chr q24.2 q24.1 Seq+ 69997 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKCA-CRYBA1 PRKCA chr17 64302245 - CRYBA1 chr17 27576160 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 3 2 In-Frame Intra-chr q24.2 q11.2 Seq+ 69998 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKCA-IGF2BP1 PRKCA chr17 64302245 - IGF2BP1 chr17 47126714 + Exonic hg19 BRCA TCGA-AC-A6IV-01A 3 1 Out-of-frame Intra-chr q24.2 q21.32 Seq+ 69999 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKCA-IGF2BP3 PRKCA chr17 64492401 - IGF2BP3 chr7 23358873 - Exonic hg19 LUSC TCGA-33-4587-01A 10 5 In-Frame Inter-chr q24.2 p15.3 Seq+ 70000 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKCA-NF1 PRKCA chr17 64302245 - NF1 chr17 29652838 + Exonic hg19 BLCA TCGA-4Z-AA86-01A 7 5 Out-of-frame Intra-chr q24.2 q11.2 Oncogene Tumor suppressor gene Seq+ 70001 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKCA-PI4KA PRKCA chr17 64302245 - PI4KA chr22 21161746 - Exonic hg19 SARC TCGA-HS-A5N9-01A 2 1 Out-of-frame Inter-chr q24.2 q11.21 70002 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKCA-PITPNC1 PRKCA chr17 64492401 - PITPNC1 chr17 65528918 + Exonic hg19 LUAD TCGA-05-5429-01A 4 2 In-Frame Intra-chr q24.2 q24.2 Seq+ 70003 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKCA-PITPNC1 PRKCA chr17 64302245 - PITPNC1 chr17 65665624 + Exonic hg19 SKCM TCGA-EB-A4XL-01A 39 16 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 70004 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKCA-PPP4R4 PRKCA chr17 64302245 - PPP4R4 chr14 94633881 + Exonic hg19 LIHC TCGA-2Y-A9H0-01A 3 3 Out-of-frame Inter-chr q24.2 q32.12 Seq+ 70005 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKCA-RAB40B PRKCA chr17 64302245 - RAB40B chr17 80617533 - Exonic hg19 SARC TCGA-3B-A9HS-01A 2 2 Out-of-frame Intra-chr q24.2 q25.3 70006 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKCA-RGS9 PRKCA chr17 64637584 - RGS9 chr17 63221120 + Exonic hg19 BRCA TCGA-3C-AALI-01A 57 27 Out-of-frame Intra-chr q24.2 q24.1 Seq+ 70007 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKCA-RP11-540D14.8 PRKCA chr17 64302245 - RP11-540D14.8 chr1 155057567 + Exonic hg19 LIHC TCGA-LG-A9QC-01A 2 1 Out-of-frame Inter-chr q24.2 70008 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKCA-RPS6KB1 PRKCA chr17 64683385 - RPS6KB1 chr17 57987923 + Exonic hg19 LIHC TCGA-DD-AADC-01A 14 5 Out-of-frame Intra-chr q24.2 q23.1 Oncogene Seq+ 70009 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKCA-SDK1 PRKCA chr17 64641629 - SDK1 chr7 3990555 + Exonic hg19 LUSC TCGA-66-2793-01A 3 1 In-Frame Inter-chr q24.2 p22.2 70010 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKCA-ST6GALNAC2 PRKCA chr17 64492401 - ST6GALNAC2 chr17 74574898 - Exonic hg19 BRCA TCGA-A2-A0YE-01A 8 6 Out-of-frame Intra-chr q24.2 q25.1 Seq+ 70011 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKCA-TMEM100 PRKCA chr17 64492401 - TMEM100 chr17 53805343 - Exonic hg19 COAD TCGA-AY-A8YK-01A 5 10 CDS-5'UTR Intra-chr q24.2 q22 Seq+ 70012 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKCE-CAMKMT PRKCE chr2 45879587 - CAMKMT chr2 44934538 + Exonic hg19 BRCA TCGA-EW-A3U0-01A 2 1 In-Frame Intra-chr p21 Tumor suppressor gene p21 70013 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKCE-GPR126 PRKCE chr2 46070202 - GPR126 chr6 142758571 + Exonic hg19 SKCM TCGA-EB-A6L9-06A 25 10 In-Frame Inter-chr p21 Tumor suppressor gene Seq+ 70014 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKCE-QPCT PRKCE chr2 45879587 - QPCT chr2 37579932 + Exonic hg19 PRAD TCGA-XK-AAJA-01A 10 9 In-Frame Intra-chr p21 Tumor suppressor gene p22.2 Seq+ 70015 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKCH-MNAT1 PRKCH chr14 61789182 - MNAT1 chr14 61434947 + Exonic hg19 LGG TCGA-TQ-A7RS-01A 10 6 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 70016 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKCI-TNIK PRKCI chr3 169953139 - TNIK chr3 170912424 - Exonic hg19 BRCA TCGA-D8-A27N-01A 22 14 Out-of-frame Intra-chr q26.2 q26.31 STE:STE20 Seq+ 70017 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKCZ-GABRD PRKCZ chr1 1991030 - GABRD chr1 1956381 + Exonic hg19 BRCA TCGA-UL-AAZ6-01A 9 9 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 70018 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKD2-CKM PRKD2 chr19 47207426 - CKM chr19 45815178 - Exonic hg19 BRCA TCGA-BH-A0HX-01A 5 8 In-Frame Intra-chr q13.32 q13.32 Seq+ 70019 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKD2-KLHL26 PRKD2 chr19 47204056 - KLHL26 chr19 18778474 + Exonic hg19 ESCA TCGA-L5-A891-01A 14 56 In-Frame Intra-chr q13.32 p13.11 Seq+ 70020 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKD2-MYH14 PRKD2 chr19 47207426 - MYH14 chr19 50747499 + Exonic hg19 STAD TCGA-HU-A4HD-01A 5 79 In-Frame Intra-chr q13.32 q13.33 Seq+ 70021 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKD2-STRN4 PRKD2 chr19 47192794 - STRN4 chr19 47242145 - Exonic hg19 SARC TCGA-3B-A9HU-01A 10 6 In-Frame Intra-chr q13.32 q13.32 70022 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKD3-AC016722.2 PRKD3 chr2 37551824 - AC016722.2 chr2 47083062 + Exonic hg19 LUAD TCGA-64-1676-01A 14 22 Out-of-frame Intra-chr p22.2 p21 70023 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKD3-TMEM51 PRKD3 chr2 37520276 - TMEM51 chr1 15536986 + Exonic hg19 SARC TCGA-K1-A3PO-01A 11 6 CDS-5'UTR Inter-chr p22.2 p36.21 Seq+ 70024 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKDC-CA3 PRKDC chr8 48769717 - CA3 chr8 86351941 + Exonic hg19 PCPG TCGA-QT-A5XO-01A 3 1 Out-of-frame Intra-chr q11.21 Oncogene q21.2 70025 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKDC-CEP290 PRKDC chr8 48744375 - CEP290 chr12 88533341 - Exonic hg19 BRCA TCGA-AN-A0FD-01A 3 2 Out-of-frame Inter-chr q11.21 Oncogene q21.32 Seq+ 70026 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKDC-CLVS1 PRKDC chr8 48824970 - CLVS1 chr8 62212236 + Exonic hg19 COAD TCGA-RU-A8FL-01A 7 3 CDS-5'UTR Intra-chr q11.21 Oncogene q12.2 Seq+ 70027 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKDC-MYO5A PRKDC chr8 48730011 - MYO5A chr15 52667657 - Exonic hg19 LUAD TCGA-86-7713-01A 4 7 Out-of-frame Inter-chr q11.21 Oncogene q21.2 Seq+ 70028 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKDC-UBE2V2 PRKDC chr8 48866180 - UBE2V2 chr8 48955593 + Exonic hg19 PRAD TCGA-KK-A8IB-01A 8 3 In-Frame Intra-chr q11.21 Oncogene q11.21 Seq+ 70029 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKRA-AGPS PRKRA chr2 179300872 - AGPS chr2 178305693 + Exonic hg19 LUAD TCGA-44-7670-01A 2 2 In-Frame Intra-chr q31.2 q31.2 70030 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKRA-SEC31A PRKRA chr2 179315693 - SEC31A chr4 83803093 - Exonic hg19 PRAD TCGA-HC-7081-01A 18 14 CDS-5'UTR Inter-chr q31.2 q21.22 Seq+ 70031 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKRIR-ANO1 PRKRIR chr11 76091792 - ANO1 chr11 70016993 + Exonic hg19 BRCA TCGA-5T-A9QA-01A 22 28 Out-of-frame Intra-chr q13.3 Seq+ 70032 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKRIR-MARK4 PRKRIR chr11 76072000 - MARK4 chr19 45767942 + Exonic hg19 BRCA TCGA-A1-A0SQ-01A 12 83 Out-of-frame Inter-chr q13.32 CAMK:CAMKL Oncogene Seq+ 70033 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKRIR-POLD4 PRKRIR chr11 76091792 - POLD4 chr11 67120548 - Exonic hg19 LUAD TCGA-53-A4EZ-01A 7 6 Out-of-frame Intra-chr q13.2 Seq+ 70034 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRKX-CLCN4 PRKX chrX 3631129 - CLCN4 chrX 10126329 + Exonic hg19 LGG TCGA-DU-7299-01A 2 1 CDS-5'UTR Intra-chr p22.33 AGC:PKA p22.2 Seq+ 70035 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRLR-CDH12 PRLR chr5 35118163 - CDH12 chr5 22505473 - Exonic hg19 ACC TCGA-OR-A5KX-01A 6 9 5'UTR-5'UTR Intra-chr p13.2 p14.3 Seq+ 70036 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRLR-CLPTM1L PRLR chr5 35230370 - CLPTM1L chr5 1318568 - Exonic hg19 ACC TCGA-OR-A5J1-01A 88 43 5'UTR-CDS Intra-chr p13.2 p15.33 Seq+ 70037 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRLR-KDM3B PRLR chr5 35230370 - KDM3B chr5 137708363 + Exonic hg19 BRCA TCGA-A2-A04U-01A 3 1 5'UTR-CDS Intra-chr p13.2 q31.2 Tumor suppressor gene Seq+ 70038 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRLR-PLCXD3 PRLR chr5 35230370 - PLCXD3 chr5 41382636 - Exonic hg19 BRCA TCGA-D8-A13Z-01A 42 21 5'UTR-CDS Intra-chr p13.2 p13.1 Seq+ 70039 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRMT1-TLE6 PRMT1 chr19 50180573 - TLE6 chr19 2978196 + Exonic hg19 LAML TCGA-AB-2857-03A 6 3 5'UTR-5'UTR Intra-chr q13.33 p13.3 Seq+ 70040 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRMT2-DIP2A PRMT2 chr21 48064400 - DIP2A chr21 47985626 + Exonic hg19 BRCA TCGA-AR-A0U4-01A 12 21 In-Frame Intra-chr q22.3 q22.3 Seq+ 70041 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRMT2-STX18 PRMT2 chr21 48068531 - STX18 chr4 4473433 - Exonic hg19 LUAD TCGA-93-A4JP-01A 2 5 In-Frame Inter-chr q22.3 p16.2 Seq+ 70042 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRMT2-WRB PRMT2 chr21 48069651 - WRB chr21 40762624 + Exonic hg19 HNSC TCGA-D6-A4ZB-01A 6 2 In-Frame Intra-chr q22.3 q22.2 Seq+ 70043 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRMT3-C10orf112 PRMT3 chr11 20515800 - C10orf112 chr10 19676457 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 5 2 Out-of-frame Inter-chr p15.1 Transcription factor 70044 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRMT7-EXOC4 PRMT7 chr16 68380183 - EXOC4 chr7 133580352 + Exonic hg19 SARC TCGA-DX-A7EF-01A 18 21 In-Frame Inter-chr q22.1 q33 Seq+ 70045 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRMT7-NFATC3 PRMT7 chr16 68389786 - NFATC3 chr16 68260253 + Exonic hg19 BRCA TCGA-E2-A1LE-01A 22 5 Out-of-frame Intra-chr q22.1 q22.1 Transcription factor Seq+ 70046 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PROSC-CHMP1A PROSC chr8 37623873 - CHMP1A chr16 89713739 - Exonic hg19 BLCA TCGA-XF-A9SK-01A 6 13 In-Frame Inter-chr q24.3 Seq+ 70047 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PROSER1-MIPEP PROSER1 chr13 39603418 - MIPEP chr13 24444334 - Exonic hg19 COAD TCGA-DM-A28F-01A 8 8 Out-of-frame Intra-chr q13.3 q12.12 Seq+ 70048 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRPF18-CACNB2 PRPF18 chr10 13647744 - CACNB2 chr10 18439812 + Exonic hg19 BRCA TCGA-C8-A12L-01A 10 4 In-Frame Intra-chr p13 p12.33 Seq+ 70049 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRPF18-CCDC3 PRPF18 chr10 13629152 - CCDC3 chr10 12940679 - Exonic hg19 LUAD TCGA-49-AAR0-01A 2 2 In-Frame Intra-chr p13 p13 Seq+ 70050 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRPF19-DDB1 PRPF19 chr11 60668054 - DDB1 chr11 61091609 - Exonic hg19 BRCA TCGA-A8-A07W-01A 52 27 In-Frame Intra-chr q12.2 q12.2 Seq+ 70051 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRPF19-NLRP14 PRPF19 chr11 60668054 - NLRP14 chr11 7059797 + Exonic hg19 SARC TCGA-X6-A8C3-01A 5 11 CDS-5'UTR Intra-chr q12.2 p15.4 Seq+ 70052 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRPF3-CTSS PRPF3 chr1 150294041 - CTSS chr1 150730456 - Exonic hg19 LUAD TCGA-86-8673-01A 5 6 5'UTR-CDS Intra-chr q21.2 q21.3 Seq+ 70053 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRPF3-OTUD7B PRPF3 chr1 150318967 - OTUD7B chr1 149943179 - Exonic hg19 SARC TCGA-DX-A23U-01A 34 22 In-Frame Intra-chr q21.2 q21.2 Seq+ 70054 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRPF31-CACNG7 PRPF31 chr19 54622013 - CACNG7 chr19 54445290 + Exonic hg19 OV TCGA-13-A5FT-01A 16 101 Out-of-frame Intra-chr q13.42 Seq+ 70055 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRPF31-SPRYD4 PRPF31 chr19 54629992 - SPRYD4 chr12 56862823 + Exonic hg19 PRAD TCGA-V1-A9O9-01A 2 3 Out-of-frame Inter-chr q13.3 70056 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRPF31-ZNF547 PRPF31 chr19 54629992 - ZNF547 chr19 57879912 + Exonic hg19 ESCA TCGA-L5-A891-01A 2 3 CDS-5'UTR Intra-chr q13.43 Transcription factor Seq+ 70057 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRPF38A-ABCD3 PRPF38A chr1 52871511 - ABCD3 chr1 94924163 + Exonic hg19 SKCM TCGA-EB-A551-01A 2 2 In-Frame Intra-chr p32.3 p21.3 Seq+ 70058 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRPF38A-CDNF PRPF38A chr1 52876872 - CDNF chr10 14870271 - Exonic hg19 SARC TCGA-IF-A4AK-01A 3 5 Out-of-frame Inter-chr p32.3 p13 Seq+ 70059 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRPF40B-CDH4 PRPF40B chr12 49962506 - CDH4 chr20 60448784 + Exonic hg19 SARC TCGA-DX-A1KZ-01A 7 14 5'UTR-CDS Inter-chr q13.12 q13.33 Tumor suppressor gene Seq+ 70060 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRPF4B-F13A1 PRPF4B chr6 4021700 - F13A1 chr6 6197559 - Exonic hg19 SKCM TCGA-GN-A264-06A 166 238 In-Frame Intra-chr p25.2 p25.1 Seq+ 70061 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRPF4B-FAM50B PRPF4B chr6 4021700 - FAM50B chr6 3850023 + Exonic hg19 LIHC TCGA-2Y-A9H0-01A 2 2 CDS-5'UTR Intra-chr p25.2 p25.2 Seq+ 70062 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRPF6-DNAJC5 PRPF6 chr20 62626835 - DNAJC5 chr20 62562204 + Exonic hg19 LUAD TCGA-91-7771-01A 39 20 In-Frame Intra-chr q13.33 q13.33 Seq+ 70063 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRPF6-RP11-366L20.2 PRPF6 chr20 62616378 - RP11-366L20.2 chr12 66245432 - Exonic hg19 STAD TCGA-BR-8687-01A 157 242 Out-of-frame Inter-chr q13.33 70064 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRPF6-SDC4 PRPF6 chr20 62626445 - SDC4 chr20 43964560 - Exonic hg19 BRCA TCGA-C8-A8HP-01A 10 5 In-Frame Intra-chr q13.33 q13.12 Seq+ 70065 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRPF6-STAT6 PRPF6 chr20 62664449 - STAT6 chr12 57496773 - Exonic hg19 STAD TCGA-BR-8687-01A 2 1 Out-of-frame Inter-chr q13.33 q13.3 Transcription factor 70066 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRPSAP1-ST6GALNAC2 PRPSAP1 chr17 74344610 - ST6GALNAC2 chr17 74574898 - Exonic hg19 BRCA TCGA-AR-A251-01A 16 13 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 70067 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRPSAP2-EEPD1 PRPSAP2 chr17 18775962 - EEPD1 chr7 36320724 + Exonic hg19 LUAD TCGA-44-6145-01A 9 5 Out-of-frame Inter-chr p11.2 p14.2 Seq+ 70068 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRPSAP2-PLLP PRPSAP2 chr17 18770647 - PLLP chr16 57292496 - Exonic hg19 HNSC TCGA-BA-A8YP-01A 27 20 Out-of-frame Inter-chr p11.2 q13 Seq+ 70069 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRR11-SUZ12 PRR11 chr17 57275150 - SUZ12 chr17 30315339 + Exonic hg19 HNSC TCGA-F7-8298-01A 5 2 In-Frame Intra-chr q22 q11.2 Tumor suppressor gene 70070 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRR12-CDC42EP5 PRR12 chr19 50124879 - CDC42EP5 chr19 54982906 - Exonic hg19 CESC TCGA-C5-A7X3-01A 20 13 CDS-5'UTR Intra-chr q13.33 Transcription factor Seq+ 70071 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRR12-FDX1L PRR12 chr19 50105175 - FDX1L chr19 10421616 - Exonic hg19 SKCM TCGA-ER-A3ET-06A 66 31 Out-of-frame Intra-chr q13.33 Transcription factor Seq+ 70072 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRR12-FLT3LG PRR12 chr19 50105175 - FLT3LG chr19 49983555 + Exonic hg19 LUSC TCGA-56-8304-01A 3 3 Out-of-frame Intra-chr q13.33 Transcription factor q13.33 Seq+ 70073 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRR12-PRRG2 PRR12 chr19 50124879 - PRRG2 chr19 50091754 + Exonic hg19 BRCA TCGA-E2-A15E-01A 3 2 Out-of-frame Intra-chr q13.33 Transcription factor q13.33 Seq+ 70074 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRR12-PRRG2 PRR12 chr19 50124879 - PRRG2 chr19 50091754 + Exonic hg19 BRCA TCGA-E2-A15E-06A 12 9 Out-of-frame Intra-chr q13.33 Transcription factor q13.33 Seq+ 70075 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRR12-SYMPK PRR12 chr19 50119476 - SYMPK chr19 46357765 - Exonic hg19 READ TCGA-DY-A1DF-01A 16 10 CDS-5'UTR Intra-chr q13.33 Transcription factor q13.32 Seq+ 70076 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRR14-GSG1L PRR14 chr16 30666914 - GSG1L chr16 27974524 - Exonic hg19 BRCA TCGA-S3-AA0Z-01A 2 3 Out-of-frame Intra-chr p11.2 p12.1 Seq+ 70077 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRR14L-POLD4 PRR14L chr22 32145979 - POLD4 chr11 67120548 - Exonic hg19 LIHC TCGA-ZS-A9CF-01A 19 19 5'UTR-CDS Inter-chr q12.2 q13.2 Seq+ 70078 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRR14L-POLD4 PRR14L chr22 32145979 - POLD4 chr11 67120548 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 14 21 5'UTR-CDS Inter-chr q12.2 q13.2 Seq+ 70079 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRR14L-SOX10 PRR14L chr22 32134373 - SOX10 chr22 38379875 - Exonic hg19 HNSC TCGA-CV-6941-01A 2 2 CDS-5'UTR Intra-chr q12.2 q13.1 Transcription factor Seq+ 70080 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRR15L-CBX1 PRR15L chr17 46035023 - CBX1 chr17 46154403 - Exonic hg19 STAD TCGA-BR-8286-01A 2 33 5'UTR-5'UTR Intra-chr q21.32 q21.32 Seq+ 70081 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRR15L-CDK5RAP3 PRR15L chr17 46035023 - CDK5RAP3 chr17 46050885 + Exonic hg19 MESO TCGA-MQ-A4LC-01A 9 6 5'UTR-CDS Intra-chr q21.32 q21.32 Seq+ 70082 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRR15L-KCNH4 PRR15L chr17 46035023 - KCNH4 chr17 40309136 - Exonic hg19 PRAD TCGA-G9-6348-01A 96 42 5'UTR-3'UTR Intra-chr q21.32 q21.2 Seq+ 70083 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRR15L-RAB5C PRR15L chr17 46035023 - RAB5C chr17 40282608 - Exonic hg19 PRAD TCGA-G9-6348-01A 65 22 5'UTR-5'UTR Intra-chr q21.32 q21.2 Seq+ 70084 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRR19-LRRC68 PRR19 chr19 42806655 - LRRC68 chr19 45641772 + Exonic hg19 BRCA TCGA-BH-A0H0-01A 11 20 Out-of-frame Intra-chr q13.2 70085 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRR5-CSNK1E PRR5 chr22 45110551 - CSNK1E chr22 38732711 - Exonic hg19 SKCM TCGA-FS-A4F4-06A 2 1 Out-of-frame Intra-chr q13.31 Tumor suppressor gene q13.1 70086 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRR5-ARHGAP8-XRCC6 PRR5-ARHGAP8 chr22 45182486 - XRCC6 chr22 42054256 + Exonic hg19 LUAD TCGA-55-A4DG-01A 10 18 Out-of-frame Intra-chr q13.31 Tumor suppressor gene q13.2 70087 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRR5L-ITPA PRR5L chr11 36424928 - ITPA chr20 3202487 + Exonic hg19 UCEC TCGA-AJ-A3NF-01A 33 38 Out-of-frame Inter-chr p13 p13 Seq+ 70088 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRR5L-TRIM44 PRR5L chr11 36424928 - TRIM44 chr11 35747472 + Exonic hg19 BRCA TCGA-A7-A6VV-01A 4 3 Out-of-frame Intra-chr p13 p13 Seq+ 70089 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRC1-NCALD PRRC1 chr5 126890773 - NCALD chr8 102813898 - Exonic hg19 PRAD TCGA-HC-8256-01A 2 1 Out-of-frame Inter-chr q23.2 q22.3 70090 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRC1-SPINK6 PRRC1 chr5 126853468 - SPINK6 chr5 147594468 + Exonic hg19 PRAD TCGA-YL-A8SH-01B 17 19 5'UTR-CDS Intra-chr q23.2 q32 Seq+ 70091 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRC2A-AIF1 PRRC2A chr6 31592299 - AIF1 chr6 31583298 + Exonic hg19 BRCA TCGA-AQ-A04J-01A 7 4 In-Frame Intra-chr Tumor suppressor gene Seq+ 70092 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRC2A-FKBPL PRRC2A chr6 31602334 - FKBPL chr6 32097631 - Exonic hg19 MESO TCGA-TS-A7P0-01A 54 11 CDS-5'UTR Intra-chr Seq+ 70093 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRC2A-NCR3 PRRC2A chr6 31604385 - NCR3 chr6 31557676 - Exonic hg19 BRCA TCGA-D8-A13Y-01A 141 23 Out-of-frame Intra-chr Seq+ 70094 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRC2A-SFN PRRC2A chr6 31599597 - SFN chr1 27189704 + Exonic hg19 HNSC TCGA-CN-6998-01A 3 1 Out-of-frame Inter-chr p36.11 Tumor suppressor gene 70095 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRC2A-TREM2 PRRC2A chr6 31588635 - TREM2 chr6 41129351 - Exonic hg19 SARC TCGA-X6-A8C2-01A 25 17 5'UTR-CDS Intra-chr p21.1 Seq+ 70096 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRC2B-NR1H3 PRRC2B chr9 134319715 - NR1H3 chr11 47282792 + Exonic hg19 LGG TCGA-QH-A6CV-01A 53 31 In-Frame Inter-chr q34.13 p11.2 Transcription factor Seq+ 70097 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRC2B-NUP155 PRRC2B chr9 134269650 - NUP155 chr5 37293087 - Exonic hg19 OV TCGA-25-2397-01A 10 34 5'UTR-CDS Inter-chr q34.13 p13.2 Seq+ 70098 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRC2B-NUP214 PRRC2B chr9 134269650 - NUP214 chr9 134090599 + Exonic hg19 LUAD TCGA-44-6778-01A 3 12 5'UTR-CDS Intra-chr q34.13 q34.13 Oncogene Seq+ 70099 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRC2B-NUP214 PRRC2B chr9 134340465 - NUP214 chr9 134050847 + Exonic hg19 BRCA TCGA-A8-A09N-01A 117 61 In-Frame Intra-chr q34.13 q34.13 Oncogene Seq+ 70100 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRC2B-NUP214 PRRC2B chr9 134358832 - NUP214 chr9 134103547 + Exonic hg19 UCEC TCGA-AX-A2H4-01A 94 56 Out-of-frame Intra-chr q34.13 q34.13 Oncogene Seq+ 70101 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRC2B-NUP214 PRRC2B chr9 134354780 - NUP214 chr9 134103547 + Exonic hg19 LIHC TCGA-DD-AAVV-01A 11 11 In-Frame Intra-chr q34.13 q34.13 Oncogene Seq+ 70102 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRC2B-NUP214 PRRC2B chr9 134334743 - NUP214 chr9 134090599 + Exonic hg19 UCS TCGA-N8-A56S-01A 6 4 In-Frame Intra-chr q34.13 q34.13 Oncogene Seq+ 70103 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRC2B-PRCD PRRC2B chr9 134358832 - PRCD chr17 74536587 + Exonic hg19 UCEC TCGA-A5-A7WK-01A 56 73 Out-of-frame Inter-chr q34.13 q25.1 Seq+ 70104 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRC2B-SET PRRC2B chr9 134354780 - SET chr9 131446059 + Exonic hg19 BRCA TCGA-BH-A0AV-01A 12 6 Out-of-frame Intra-chr q34.13 q34.11 Seq+ 70105 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRC2B-UHRF2 PRRC2B chr9 134269650 - UHRF2 chr9 6475391 + Exonic hg19 HNSC TCGA-QK-A8ZA-01A 8 8 5'UTR-5'UTR Intra-chr q34.13 p24.1 Tumor suppressor gene Seq+ 70106 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRC2C-AP000350.4 PRRC2C chr1 171553326 - AP000350.4 chr22 24238297 - Exonic hg19 SARC TCGA-DX-A3U6-01A 7 6 Out-of-frame Inter-chr q24.3 q11.23 70107 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRC2C-CENPL PRRC2C chr1 171540560 - CENPL chr1 173793157 - Exonic hg19 BRCA TCGA-E2-A10A-01A 11 4 CDS-5'UTR Intra-chr q24.3 q25.1 Seq+ 70108 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRC2C-FASLG PRRC2C chr1 171454874 - FASLG chr1 172634762 + Exonic hg19 BRCA TCGA-A7-A0CG-01A 7 4 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 70109 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRC2C-FMO1 PRRC2C chr1 171454874 - FMO1 chr1 171236682 + Exonic hg19 LUSC TCGA-96-8169-01A 70 57 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 70110 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRC2C-FMO3 PRRC2C chr1 171454874 - FMO3 chr1 171072926 + Exonic hg19 UCEC TCGA-BK-A139-02A 100 65 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 70111 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRC2C-PRRX1 PRRC2C chr1 171454874 - PRRX1 chr1 170688867 + Exonic hg19 PRAD TCGA-KK-A5A1-01A 7 3 5'UTR-CDS Intra-chr q24.3 q24.2 Transcription factor Seq+ 70112 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRC2C-RFWD2 PRRC2C chr1 171544267 - RFWD2 chr1 176153828 - Exonic hg19 BRCA TCGA-BH-A8FY-01A 5 2 Out-of-frame Intra-chr q24.3 q25.2 Tumor suppressor gene 70113 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRG2-AGPAT2 PRRG2 chr19 50086561 - AGPAT2 chr9 139572008 - Exonic hg19 UCEC TCGA-AJ-A3BD-01A 2 9 Out-of-frame Inter-chr q13.33 q34.3 Seq+ 70114 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRG2-CCDC155 PRRG2 chr19 50086974 - CCDC155 chr19 49912224 + Exonic hg19 BRCA TCGA-B6-A0I1-01A 4 5 In-Frame Intra-chr q13.33 q13.33 Seq+ 70115 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRG2-FCGRT PRRG2 chr19 50087209 - FCGRT chr19 50027764 + Exonic hg19 BRCA TCGA-A8-A08P-01A 3 20 In-Frame Intra-chr q13.33 q13.33 Seq+ 70116 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRG4-RAPGEFL1 PRRG4 chr11 32852178 - RAPGEFL1 chr17 38345118 + Exonic hg19 BRCA TCGA-B6-A0IG-01A 38 34 Out-of-frame Inter-chr p13 q21.1 Seq+ 70117 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRRG4-ZNF215 PRRG4 chr11 32861785 - ZNF215 chr11 6953325 + Exonic hg19 SARC TCGA-DX-A1KU-01A 30 11 CDS-5'UTR Intra-chr p13 p15.4 Transcription factor Seq+ 70118 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRSS23-LGALS12 PRSS23 chr11 86534635 - LGALS12 chr11 63277935 + Exonic hg19 HNSC TCGA-P3-A6T5-01A 19 13 3'UTR-CDS Intra-chr q14.2 q12.3 Seq+ 70119 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRTG-ATPBD4 PRTG chr15 55971484 - ATPBD4 chr15 35834708 - Exonic hg19 LUSC TCGA-56-8629-01A 5 2 In-Frame Intra-chr q21.3 70120 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRTG-TCF12 PRTG chr15 56032580 - TCF12 chr15 57484356 + Exonic hg19 PRAD TCGA-XK-AAJA-01A 2 1 Out-of-frame Intra-chr q21.3 q21.3 Oncogene Transcription factor 70121 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRUNE-C1orf54 PRUNE chr1 150981147 - C1orf54 chr1 150244687 + Exonic hg19 BRCA TCGA-BH-A18R-01A 2 1 Out-of-frame Intra-chr q21.2 70122 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRUNE-LCE2A PRUNE chr1 150990380 - LCE2A chr1 152671358 + Exonic hg19 BLCA TCGA-UY-A78N-01A 63 44 CDS-5'UTR Intra-chr q21.3 Seq+ 70123 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRUNE-LCE4A PRUNE chr1 150990380 - LCE4A chr1 152680636 + Exonic hg19 BLCA TCGA-UY-A78N-01A 20 24 Out-of-frame Intra-chr q21.3 70124 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRUNE-PI4KB PRUNE chr1 150998149 - PI4KB chr1 151280277 - Exonic hg19 UCEC TCGA-AX-A3G3-01A 14 9 Out-of-frame Intra-chr q21.3 Seq+ 70125 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRUNE-RAB7A PRUNE chr1 150981147 - RAB7A chr3 128514203 + Exonic hg19 PRAD TCGA-YJ-A8SW-01A 53 23 CDS-5'UTR Inter-chr q21.3 Tumor suppressor gene Seq+ 70126 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRUNE2-GNA14 PRUNE2 chr9 79438548 - GNA14 chr9 80049438 - Exonic hg19 PRAD TCGA-KK-A5A1-01A 6 7 In-Frame Intra-chr q21.2 q21.2 Seq+ 70127 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRUNE2-GNAQ PRUNE2 chr9 79438548 - GNAQ chr9 80412564 - Exonic hg19 BRCA TCGA-AR-A251-01A 2 5 Out-of-frame Intra-chr q21.2 q21.2 Oncogene Seq+ 70128 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRUNE2-HDAC9 PRUNE2 chr9 79318253 - HDAC9 chr7 18684294 + Exonic hg19 KIRP TCGA-B9-A44B-01A 2 2 Out-of-frame Inter-chr q21.2 p21.1 Seq+ 70129 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PRX-BLVRB PRX chr19 40904527 - BLVRB chr19 40953953 - Exonic hg19 ACC TCGA-OR-A5J7-01A 117 86 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 70130 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSAP-ABCA1 PSAP chr10 73576058 - ABCA1 chr9 107567001 - Exonic hg19 SKCM TCGA-EB-A44Q-06A 2 1 3'UTR-CDS Inter-chr q22.1 q31.1 70131 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSAP-AC011333.1 PSAP chr10 73576058 - AC011333.1 chr5 173473096 + Exonic hg19 BRCA TCGA-A7-A3J0-01A 2 1 Out-of-frame Inter-chr q22.1 q35.2 70132 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSAP-ARFGEF2 PSAP chr10 73576056 - ARFGEF2 chr20 47615777 + Exonic hg19 SKCM TCGA-EB-A5VU-01A 2 12 Out-of-frame Inter-chr q22.1 q13.13 70133 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSAP-C1S PSAP chr10 73576058 - C1S chr12 7096351 + Exonic hg19 BRCA TCGA-A7-A5ZV-01A 2 1 Out-of-frame Inter-chr q22.1 p13.31 70134 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSAP-C3 PSAP chr10 73576058 - C3 chr19 6720693 - Exonic hg19 SKCM TCGA-D3-A3CC-06A 2 1 Out-of-frame Inter-chr q22.1 p13.3 70135 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSAP-C7 PSAP chr10 73576058 - C7 chr5 40954982 + Exonic hg19 SKCM TCGA-FR-A8YE-06A 2 10 Out-of-frame Inter-chr q22.1 p13.1 Tumor suppressor gene 70136 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSAP-DDX27 PSAP chr10 73576058 - DDX27 chr20 47849303 + Exonic hg19 UVM TCGA-V4-A9EU-01A 2 9 Out-of-frame Inter-chr q22.1 q13.13 70137 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSAP-FADS2 PSAP chr10 73576056 - FADS2 chr11 61588853 + Exonic hg19 LUAD TCGA-73-4666-01A 2 2 Out-of-frame Inter-chr q22.1 q12.2 70138 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSAP-FAR1 PSAP chr10 73576307 - FAR1 chr11 13744912 + Exonic hg19 LUAD TCGA-75-7027-01A 2 17 Out-of-frame Inter-chr q22.1 p15.3 70139 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSAP-FOXP1 PSAP chr10 73576307 - FOXP1 chr3 71007472 - Exonic hg19 LUAD TCGA-55-7995-01A 2 6 Out-of-frame Inter-chr q22.1 p13 Oncogene Tumor suppressor gene Transcription factor 70140 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSAP-IQCE PSAP chr10 73576056 - IQCE chr7 2641075 + Exonic hg19 SKCM TCGA-D3-A1Q4-06A 2 16 3'UTR-CDS Inter-chr q22.1 p22.3 70141 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSAP-KIF3A PSAP chr10 73576058 - KIF3A chr5 132035266 - Exonic hg19 LUAD TCGA-67-3770-01A 2 7 Out-of-frame Inter-chr q22.1 q31.1 70142 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSAP-OFD1 PSAP chr10 73576307 - OFD1 chrX 13786837 + Exonic hg19 UCS TCGA-N7-A59B-01A 2 4 3'UTR-CDS Inter-chr q22.1 p22.2 70143 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSAP-PLEKHB2 PSAP chr10 73576056 - PLEKHB2 chr2 131876464 + Exonic hg19 LUAD TCGA-86-8358-01A 2 12 Out-of-frame Inter-chr q22.1 q21.1 70144 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSAP-PTN PSAP chr10 73576056 - PTN chr7 136938384 - Exonic hg19 UCEC TCGA-AX-A3G6-01A 2 59 3'UTR-CDS Inter-chr q22.1 q33 70145 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSAP-QKI PSAP chr10 73576058 - QKI chr6 163876363 + Exonic hg19 SKCM TCGA-ER-A19G-06A 2 1 Out-of-frame Inter-chr q22.1 q26 70146 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSAP-SIAE PSAP chr10 73576058 - SIAE chr11 124543777 - Exonic hg19 KIRC TCGA-B8-5164-01A 2 1 3'UTR-5'UTR Inter-chr q22.1 q24.2 70147 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSAP-TCERG1 PSAP chr10 73576058 - TCERG1 chr5 145888708 + Exonic hg19 SKCM TCGA-EB-A5UL-06A 2 1 3'UTR-CDS Inter-chr q22.1 q32 70148 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSAP-TSPAN8 PSAP chr10 73576056 - TSPAN8 chr12 71835367 - Exonic hg19 COAD TCGA-CK-4948-01B 2 1 Out-of-frame Inter-chr q22.1 q21.1 70149 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSAP-TYK2 PSAP chr10 73576058 - TYK2 chr19 10491352 - Exonic hg19 BRCA TCGA-A8-A08I-01A 2 1 Out-of-frame Inter-chr q22.1 p13.2 TK:JakA 70150 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSAP-TYK2 PSAP chr10 73576058 - TYK2 chr19 10491352 - Exonic hg19 KIRC TCGA-CZ-5454-01A 2 1 Out-of-frame Inter-chr q22.1 p13.2 TK:JakA 70151 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSAT1-MICB PSAT1 chr9 80932720 - MICB chr6 31473394 + Exonic hg19 OV TCGA-13-A5FT-01A 2 14 Out-of-frame Inter-chr q21.2 Seq+ 70152 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSCA-AVL9 PSCA chr8 143764142 - AVL9 chr7 32620439 + Exonic hg19 BLCA TCGA-DK-A3X1-01A 2 1 Out-of-frame Inter-chr q24.3 p14.3 70153 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSD3-INTS10 PSD3 chr8 18793544 - INTS10 chr8 19677084 + Exonic hg19 LUSC TCGA-NC-A5HK-01A 6 4 Out-of-frame Intra-chr p22 p21.3 Seq+ 70154 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSD3-PAGE4 PSD3 chr8 18871073 - PAGE4 chrX 49595002 + Exonic hg19 BRCA TCGA-A2-A04U-01A 20 34 CDS-5'UTR Inter-chr p22 p11.23 Seq+ 70155 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSEN1-ACSM1 PSEN1 chr14 73603291 - ACSM1 chr16 20709110 - Exonic hg19 LIHC TCGA-BC-A217-01A 5 2 Out-of-frame Inter-chr q24.2 p12.3 Seq+ 70156 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSIP1-TBL1X PSIP1 chr9 15486004 - TBL1X chrX 9621585 + Exonic hg19 PCPG TCGA-QT-A5XJ-01A 4 12 CDS-5'UTR Inter-chr p22.3 Oncogene p22.31 Seq+ 70157 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSKH1-C16orf87 PSKH1 chr16 67943609 - C16orf87 chr16 46858394 - Exonic hg19 COAD TCGA-A6-6650-01B 2 2 In-Frame Intra-chr q22.1 CAMK:PSK q11.2 70158 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSKH1-DAP PSKH1 chr16 67943609 - DAP chr5 10683683 - Exonic hg19 HNSC TCGA-UF-A71A-06A 5 3 Out-of-frame Inter-chr q22.1 CAMK:PSK p15.2 70159 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSKH1-TSNAXIP1 PSKH1 chr16 67943609 - TSNAXIP1 chr16 67858486 + Exonic hg19 CESC TCGA-VS-A94X-01A 21 3 Out-of-frame Intra-chr q22.1 CAMK:PSK q22.1 Seq+ 70160 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMA1-CCT5 PSMA1 chr11 14526423 - CCT5 chr5 10250033 + Exonic hg19 UCEC TCGA-EY-A2OQ-01A 2 6 Out-of-frame Inter-chr p15.2 p15.2 70161 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMA1-SERGEF PSMA1 chr11 14632512 - SERGEF chr11 17981183 - Exonic hg19 SKCM TCGA-DA-A1HW-06A 2 7 Out-of-frame Intra-chr p15.2 p15.1 Seq+ 70162 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMA3-ACTR10 PSMA3 chr14 58714550 - ACTR10 chr14 58697117 + Exonic hg19 LIHC TCGA-BC-A216-01A 151 108 In-Frame Intra-chr q23.1 q23.1 Seq+ 70163 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMA3-ACTR10 PSMA3 chr14 58718960 - ACTR10 chr14 58701088 + Exonic hg19 PAAD TCGA-IB-AAUP-01A 225 233 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 70164 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMA3-ACTR10 PSMA3 chr14 58734238 - ACTR10 chr14 58669573 + Exonic hg19 ESCA TCGA-VR-A8Q7-01A 6 57 In-Frame Intra-chr q23.1 q23.1 Seq+ 70165 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMA3-STRADA PSMA3 chr14 58724716 - STRADA chr17 61781111 - Exonic hg19 LIHC TCGA-FV-A495-01A 33 14 Out-of-frame Inter-chr q23.1 q23.3 Tumor suppressor gene Seq+ 70166 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMA3-ZNFX1 PSMA3 chr14 58738724 - ZNFX1 chr20 47863418 - Exonic hg19 BRCA TCGA-OL-A5RU-01A 2 2 Out-of-frame Inter-chr q23.1 q13.13 70167 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMA5-FOXP1 PSMA5 chr1 109944470 - FOXP1 chr3 71007472 - Exonic hg19 LUAD TCGA-55-6978-01A 2 1 Out-of-frame Inter-chr p13.3 p13 Oncogene Tumor suppressor gene Transcription factor 70168 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMA6-FAM177A1 PSMA6 chr14 35747924 - FAM177A1 chr14 35522484 + Exonic hg19 HNSC TCGA-CN-A497-01A 2 2 5'UTR-CDS Intra-chr q13.2 q13.2 70169 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMA6-PRKD1 PSMA6 chr14 35761758 - PRKD1 chr14 30516993 - Exonic hg19 LGG TCGA-DU-6402-01A 14 4 Out-of-frame Intra-chr q13.2 q12 70170 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMB2-FAM116B PSMB2 chr1 36096875 - FAM116B chr22 50750846 - Exonic hg19 LIHC TCGA-BC-A112-01A 38 29 In-Frame Inter-chr p34.3 Seq+ 70171 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMB3-RP11-723O4.6 PSMB3 chr17 36909587 - RP11-723O4.6 chr3 128629176 - Exonic hg19 BLCA TCGA-E7-A97Q-01A 57 28 Out-of-frame Inter-chr 70172 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMB7-NR6A1 PSMB7 chr9 127167596 - NR6A1 chr9 127316849 - Exonic hg19 SARC TCGA-DX-A7ES-01A 68 33 In-Frame Intra-chr q33.3 q33.3 Transcription factor Seq+ 70173 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMB7-PID1 PSMB7 chr9 127146877 - PID1 chr2 229890824 - Exonic hg19 SKCM TCGA-EE-A2MC-06A 62 62 In-Frame Inter-chr q33.3 q36.3 Seq+ 70174 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMC4-FRS2 PSMC4 chr19 40486624 - FRS2 chr12 69879982 + Exonic hg19 SARC TCGA-3B-A9HO-01A 195 136 Out-of-frame Inter-chr q15 Seq+ 70175 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMC6-GPR137C PSMC6 chr14 53180686 - GPR137C chr14 53063635 + Exonic hg19 LUSC TCGA-37-A5EL-01A 10 39 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 70176 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMD1-AC112715.2 PSMD1 chr2 231949828 - AC112715.2 chr2 238165734 + Exonic hg19 STAD TCGA-VQ-A928-01A 7 81 Out-of-frame Intra-chr q37.1 70177 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMD1-ATP2C1 PSMD1 chr2 232011070 - ATP2C1 chr3 130659474 + Exonic hg19 HNSC TCGA-CV-7177-01A 20 6 In-Frame Inter-chr q37.1 q22.1 Seq+ 70178 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMD1-DNER PSMD1 chr2 231945028 - DNER chr2 230377652 - Exonic hg19 GBM TCGA-27-1830-01A 8 12 In-Frame Intra-chr q37.1 q36.3 Seq+ 70179 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMD1-NHEJ1 PSMD1 chr2 232011070 - NHEJ1 chr2 220012517 - Exonic hg19 COAD TCGA-G4-6307-01A 67 30 In-Frame Intra-chr q37.1 q35 Seq+ 70180 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMD11-CCL15 PSMD11 chr17 30781637 - CCL15 chr17 34325427 - Exonic hg19 CHOL TCGA-W5-AA31-01A 50 10 Out-of-frame Intra-chr q11.2 Seq+ 70181 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMD11-CEP112 PSMD11 chr17 30774064 - CEP112 chr17 64179425 - Exonic hg19 BRCA TCGA-A8-A08J-01A 81 121 CDS-5'UTR Intra-chr q11.2 q24.1 Seq+ 70182 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMD11-DPRX PSMD11 chr17 30781637 - DPRX chr19 54137785 + Exonic hg19 BLCA TCGA-UY-A9PD-01A 15 11 Out-of-frame Inter-chr q11.2 q13.42 Transcription factor Seq+ 70183 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMD12-KIAA2022 PSMD12 chr17 65362528 - KIAA2022 chrX 73965532 - Exonic hg19 BRCA TCGA-AN-A0FD-01A 5 3 CDS-5'UTR Inter-chr q24.2 q13.3 Seq+ 70184 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMD12-PITPNC1 PSMD12 chr17 65362528 - PITPNC1 chr17 65528918 + Exonic hg19 BRCA TCGA-A7-A13D-01B 2 1 In-Frame Intra-chr q24.2 q24.2 Seq+ 70185 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMD13-HSD17B12 PSMD13 chr11 237144 - HSD17B12 chr11 43819870 + Exonic hg19 BLCA TCGA-GC-A6I1-01A 3 6 Out-of-frame Intra-chr p15.5 p11.2 Seq+ 70186 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMD2-ECE2 PSMD2 chr3 184022179 - ECE2 chr3 184005625 + Exonic hg19 BRCA TCGA-C8-A132-01A 44 35 In-Frame Intra-chr q27.1 q27.1 Seq+ 70187 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMD3-UNC45B PSMD3 chr17 38142965 - UNC45B chr17 33498341 + Exonic hg19 LGG TCGA-P5-A5EV-01A 12 17 In-Frame Intra-chr q21.1 q12 Seq+ 70188 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSME1-AP1G2 PSME1 chr14 24608175 - AP1G2 chr14 24037279 - Exonic hg19 KIRP TCGA-A4-7287-01A 2 4 3'UTR-5'UTR Intra-chr q12 q11.2 70189 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSME4-STON1-GTF2A1L PSME4 chr2 54197680 - STON1-GTF2A1L chr2 49003419 + Exonic hg19 LUAD TCGA-91-6848-01A 16 1 Out-of-frame Intra-chr p16.2 p16.3 70190 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMF1-CHST8 PSMF1 chr20 1106293 - CHST8 chr19 34180082 + Exonic hg19 SARC TCGA-SI-AA8C-01A 32 24 CDS-5'UTR Inter-chr p13 q13.11 Seq+ 70191 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMG2-OSBPL1A PSMG2 chr18 12703163 - OSBPL1A chr18 21914294 - Exonic hg19 ESCA TCGA-L5-A8NE-01A 5 33 Out-of-frame Intra-chr p11.21 q11.2 Seq+ 70192 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMG2-SETMAR PSMG2 chr18 12706720 - SETMAR chr3 4354582 + Exonic hg19 PRAD TCGA-ZG-A9L2-01A 13 15 Out-of-frame Inter-chr p11.21 p26.1 Seq+ 70193 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSMG4-EEF1E1 PSMG4 chr6 3259430 - EEF1E1 chr6 8080263 - Exonic hg19 BRCA TCGA-C8-A8HQ-01A 2 1 In-Frame Intra-chr p25.2 p24.3 Tumor suppressor gene 70194 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSPC1-ACTR8 PSPC1 chr13 20304379 - ACTR8 chr3 53914136 - Exonic hg19 BLCA TCGA-E7-A85H-01A 16 18 In-Frame Inter-chr q12.11 p21.1 Seq+ 70195 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSPC1-ARHGEF2 PSPC1 chr13 20333463 - ARHGEF2 chr1 155959142 - Exonic hg19 BRCA TCGA-LL-A73Y-01A 6 8 CDS-5'UTR Inter-chr q12.11 q22 70196 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSPC1-CRYL1 PSPC1 chr13 20304379 - CRYL1 chr13 20987526 - Exonic hg19 GBM TCGA-06-5856-01A 14 49 In-Frame Intra-chr q12.11 q12.11 Seq+ 70197 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSPC1-METTL21C PSPC1 chr13 20356526 - METTL21C chr13 103339407 - Exonic hg19 LIHC TCGA-GJ-A9DB-01A 51 32 In-Frame Intra-chr q12.11 q33.1 Seq+ 70198 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSPC1-MPHOSPH8 PSPC1 chr13 20315705 - MPHOSPH8 chr13 20233135 + Exonic hg19 BLCA TCGA-BL-A13J-01A 5 3 Out-of-frame Intra-chr q12.11 q12.11 Seq+ 70199 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSPC1-ZMYM5 PSPC1 chr13 20304379 - ZMYM5 chr13 20409829 - Exonic hg19 BRCA TCGA-A7-A13G-01A 2 3 In-Frame Intra-chr q12.11 q12.11 70200 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSPH-PHKG1 PSPH chr7 56118831 - PHKG1 chr7 56156668 - Exonic hg19 BRCA TCGA-EW-A1PB-01A 36 21 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 70201 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PSRC1-MYBPHL PSRC1 chr1 109825302 - MYBPHL chr1 109840879 - Exonic hg19 OV TCGA-13-1488-01A 8 1 In-Frame Intra-chr p13.3 p13.3 Seq+ 70202 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTAR1-FAM108B1 PTAR1 chr9 72356708 - FAM108B1 chr9 74477523 - Exonic hg19 PRAD TCGA-EJ-AB27-01A 18 12 Out-of-frame Intra-chr q21.12 70203 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTAR1-PIP5K1B PTAR1 chr9 72347055 - PIP5K1B chr9 71503897 + Exonic hg19 SARC TCGA-DX-A48N-01A 28 14 In-Frame Intra-chr q21.12 q21.11 Seq+ 70204 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTBP1-PALM PTBP1 chr19 804438 - PALM chr19 726138 + Exonic hg19 DLBC TCGA-FF-8047-01A 18 7 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 70205 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTBP1-SCGB1C1 PTBP1 chr19 799443 - SCGB1C1 chr11 194418 + Exonic hg19 MESO TCGA-TS-A7P6-01A 38 4 In-Frame Inter-chr p13.3 p15.5 Seq+ 70206 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTBP1-UBE3C PTBP1 chr19 803636 - UBE3C chr7 157009561 + Exonic hg19 PRAD TCGA-KK-A6E1-01A 39 21 Out-of-frame Inter-chr p13.3 q36.3 Seq+ 70207 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTBP2-KAZN PTBP2 chr1 97189150 - KAZN chr1 15361245 + Exonic hg19 BRCA TCGA-BH-A1FC-01A 81 58 Out-of-frame Intra-chr p21.3 p36.21 Seq+ 70208 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTCH1-IPPK PTCH1 chr9 98268689 - IPPK chr9 95381847 - Exonic hg19 SARC TCGA-DX-A1KZ-01A 11 11 Out-of-frame Intra-chr q22.32 Oncogene Tumor suppressor gene q22.31 Seq+ 70209 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTDSS1-PTK2 PTDSS1 chr8 97321850 - PTK2 chr8 141840625 - Exonic hg19 LUAD TCGA-38-6178-01A 3 1 In-Frame Intra-chr q22.1 q24.3 Seq+ 70210 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTEN-BTRC PTEN chr10 89693008 - BTRC chr10 103290994 + Exonic hg19 CESC TCGA-IR-A3LL-01A 2 1 Out-of-frame Intra-chr q23.31 Oncogene Tumor suppressor gene q24.32 70211 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTEN-C1orf226 PTEN chr10 89653866 - C1orf226 chr1 162352972 + Exonic hg19 PRAD TCGA-VP-A87J-01A 5 36 In-Frame Inter-chr q23.31 Oncogene Tumor suppressor gene q23.3 Seq+ 70212 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTEN-CTNNA3 PTEN chr10 89690846 - CTNNA3 chr10 68979628 - Exonic hg19 PRAD TCGA-EJ-5521-01A 2 2 Out-of-frame Intra-chr q23.31 Oncogene Tumor suppressor gene q21.3 Tumor suppressor gene Seq+ 70213 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTEN-GRID1 PTEN chr10 89690846 - GRID1 chr10 87489371 - Exonic hg19 PRAD TCGA-YL-A8SA-01A 7 13 Out-of-frame Intra-chr q23.31 Oncogene Tumor suppressor gene q23.2 Seq+ 70214 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTEN-KIF20B PTEN chr10 89653866 - KIF20B chr10 91497144 + Exonic hg19 LUSC TCGA-34-A5IX-01A 2 6 Out-of-frame Intra-chr q23.31 Oncogene Tumor suppressor gene q23.31 Seq+ 70215 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTEN-NRP1 PTEN chr10 89693008 - NRP1 chr10 33559784 - Exonic hg19 PRAD TCGA-HC-A48F-01A 2 4 Out-of-frame Intra-chr q23.31 Oncogene Tumor suppressor gene p11.22 Seq+ 70216 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTEN-PYGB PTEN chr10 89693008 - PYGB chr20 25249765 + Exonic hg19 LGG TCGA-FG-A87N-01A 8 21 In-Frame Inter-chr q23.31 Oncogene Tumor suppressor gene p11.21 Seq+ 70217 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTEN-RNLS PTEN chr10 89693008 - RNLS chr10 90045263 - Exonic hg19 BLCA TCGA-ZF-A9RE-01A 13 31 In-Frame Intra-chr q23.31 Oncogene Tumor suppressor gene q23.31 Seq+ 70218 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTGDS-EEA1 PTGDS chr9 139876193 - EEA1 chr12 93229203 - Exonic hg19 LGG TCGA-CS-6665-01A 2 9 Out-of-frame Inter-chr q34.3 q22 Transcription factor 70219 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTGES2-CIZ1 PTGES2 chr9 130890527 - CIZ1 chr9 130940042 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 2 24 5'UTR-CDS Intra-chr q34.11 q34.11 Tumor suppressor gene Seq+ 70220 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTGES2-DENND1A PTGES2 chr9 130889718 - DENND1A chr9 126345549 - Exonic hg19 BRCA TCGA-D8-A1JI-01A 14 18 In-Frame Intra-chr q34.11 q33.3 Seq+ 70221 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTGES2-MLXIP PTGES2 chr9 130884641 - MLXIP chr12 122626238 + Exonic hg19 BLCA TCGA-GC-A3RB-01A 24 16 Out-of-frame Inter-chr q34.11 Transcription factor Seq+ 70222 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTGES3-NACA PTGES3 chr12 57081782 - NACA chr12 57108471 - Exonic hg19 HNSC TCGA-HD-7832-01A 229 170 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 70223 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTGES3-NACA PTGES3 chr12 57081782 - NACA chr12 57108471 - Exonic hg19 UCS TCGA-N8-A4PP-01A 228 165 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 70224 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTGES3-SPATS2 PTGES3 chr12 57081782 - SPATS2 chr12 49908338 + Exonic hg19 ESCA TCGA-L5-A4OR-01A 2 20 In-Frame Intra-chr q13.3 q13.12 Seq+ 70225 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTGFRN-AGBL4 PTGFRN chr1 117492194 - AGBL4 chr1 50163109 - Exonic hg19 BRCA TCGA-BH-A0GY-01A 13 4 In-Frame Intra-chr p13.1 p33 Seq+ 70226 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTGFRN-CD2 PTGFRN chr1 117504290 - CD2 chr1 117297253 + Exonic hg19 LUSC TCGA-37-A5EN-01A 46 16 In-Frame Intra-chr p13.1 p13.1 Seq+ 70227 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTGFRN-NOTCH2 PTGFRN chr1 117492194 - NOTCH2 chr1 120512367 - Exonic hg19 BRCA TCGA-C8-A12L-01A 3 8 In-Frame Intra-chr p13.1 p12 Oncogene Tumor suppressor gene Seq+ 70228 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTGIS-IFT52 PTGIS chr20 48156107 - IFT52 chr20 42232823 + Exonic hg19 SKCM TCGA-EE-A3AD-06A 30 26 In-Frame Intra-chr q13.13 q13.12 Seq+ 70229 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTGR1-C9orf84 PTGR1 chr9 114355206 - C9orf84 chr9 114456642 - Exonic hg19 LUAD TCGA-55-A48Y-01A 12 25 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 70230 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTK2-AC016722.1 PTK2 chr8 142011224 - AC016722.1 chr2 47049240 + Exonic hg19 BRCA TCGA-A8-A06X-01A 3 10 Out-of-frame Inter-chr q24.3 p21 70231 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTK2-AC016722.2 PTK2 chr8 142011224 - AC016722.2 chr2 47083062 + Exonic hg19 BRCA TCGA-A8-A06X-01A 7 11 Out-of-frame Inter-chr q24.3 p21 70232 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTK2-ANKRD11 PTK2 chr8 142011224 - ANKRD11 chr16 89484776 - Exonic hg19 LUAD TCGA-91-6848-01A 6 3 5'UTR-5'UTR Inter-chr q24.3 q24.3 Seq+ 70233 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTK2-CACNG8 PTK2 chr8 142010979 - CACNG8 chr19 54481400 + Exonic hg19 LUAD TCGA-91-6848-01A 2 5 5'UTR-CDS Inter-chr q24.3 q13.42 Seq+ 70234 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTK2-DENND3 PTK2 chr8 142011224 - DENND3 chr8 142146608 + Exonic hg19 STAD TCGA-CG-4443-01A 9 2 5'UTR-5'UTR Intra-chr q24.3 q24.3 Seq+ 70235 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTK2-MKLN1 PTK2 chr8 141745350 - MKLN1 chr7 131147976 + Exonic hg19 UCEC TCGA-AX-A2H4-01A 4 3 Out-of-frame Inter-chr q24.3 q32.3 Seq+ 70236 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTK2-NCR3 PTK2 chr8 141828376 - NCR3 chr6 31557676 - Exonic hg19 BRCA TCGA-BH-A1FE-01A 13 4 Out-of-frame Inter-chr q24.3 Seq+ 70237 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTK2-PPP2R5E PTK2 chr8 141900642 - PPP2R5E chr14 63920603 - Exonic hg19 BRCA TCGA-BH-A0B6-01A 14 14 Out-of-frame Inter-chr q24.3 q23.2 Seq+ 70238 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTK2-RNF139 PTK2 chr8 141696731 - RNF139 chr8 125498072 + Exonic hg19 LUAD TCGA-86-8359-01A 21 19 Out-of-frame Intra-chr q24.3 q24.13 Seq+ 70239 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTK2-SLC45A4 PTK2 chr8 142011224 - SLC45A4 chr8 142231864 - Exonic hg19 LUAD TCGA-86-8279-01A 2 2 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 70240 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTK2-TRAPPC9 PTK2 chr8 142011224 - TRAPPC9 chr8 140744445 - Exonic hg19 LUAD TCGA-55-8511-01A 261 110 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 70241 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTK2-TRAPPC9 PTK2 chr8 142011224 - TRAPPC9 chr8 141034176 - Exonic hg19 UCEC TCGA-AJ-A3I9-01A 2 10 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 70242 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTK2-TRAPPC9 PTK2 chr8 141935760 - TRAPPC9 chr8 140744445 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 72 29 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 70243 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTK2-UBE2H PTK2 chr8 142011224 - UBE2H chr7 129479175 - Exonic hg19 LUSC TCGA-46-3767-01A 2 4 5'UTR-CDS Inter-chr q24.3 q32.2 Seq+ 70244 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTK2-UGT2A3 PTK2 chr8 142011224 - UGT2A3 chr4 69798477 - Exonic hg19 BLCA TCGA-DK-A1AD-01A 13 13 5'UTR-CDS Inter-chr q24.3 Seq+ 70245 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTK2-VPS13B PTK2 chr8 141753329 - VPS13B chr8 100673582 + Exonic hg19 BLCA TCGA-KQ-A41Q-01A 3 6 In-Frame Intra-chr q24.3 q22.2 Seq+ 70246 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTK2B-ICA1L PTK2B chr8 27277590 - ICA1L chr2 203693739 - Exonic hg19 SKCM TCGA-EE-A3JI-06A 3 1 CDS-5'UTR Inter-chr p21.2 q33.2 Seq+ 70247 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTK2B-SLC5A1 PTK2B chr8 27183198 - SLC5A1 chr22 32462922 + Exonic hg19 TGCT TCGA-YU-A94I-01A 2 4 5'UTR-5'UTR Inter-chr p21.2 q12.3 Seq+ 70248 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTK7-ANKS1A PTK7 chr6 43044305 - ANKS1A chr6 34935016 + Exonic hg19 HNSC TCGA-BA-4078-01A 23 9 Out-of-frame Intra-chr p21.1 p21.31 Seq+ 70249 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTK7-CNOT2 PTK7 chr6 43044305 - CNOT2 chr12 70747609 + Exonic hg19 SARC TCGA-DX-A23Y-01A 21 17 Out-of-frame Inter-chr p21.1 q15 Seq+ 70250 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTK7-DENND4A PTK7 chr6 43044305 - DENND4A chr15 66053776 - Exonic hg19 COAD TCGA-A6-6138-01A 3 1 CDS-5'UTR Inter-chr p21.1 q22.31 70251 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTK7-DLK2 PTK7 chr6 43044305 - DLK2 chr6 43422212 - Exonic hg19 LUAD TCGA-05-4420-01A 5 4 In-Frame Intra-chr p21.1 p21.1 Seq+ 70252 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTK7-GNMT PTK7 chr6 43044305 - GNMT chr6 42929950 + Exonic hg19 BLCA TCGA-ZF-AA4X-01A 2 1 Out-of-frame Intra-chr p21.1 p21.1 Tumor suppressor gene 70253 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTK7-PTCRA PTK7 chr6 43114436 - PTCRA chr6 42890883 + Exonic hg19 BRCA TCGA-BH-A0C0-01A 2 8 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 70254 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTMS-EIF4G1 PTMS chr12 6880118 - EIF4G1 chr3 184042892 + Exonic hg19 PRAD TCGA-EJ-A7NJ-01A 2 8 Out-of-frame Inter-chr p13.31 q27.1 70255 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTMS-SUPT16H PTMS chr12 6880109 - SUPT16H chr14 21829491 - Exonic hg19 TGCT TCGA-2G-AAFV-01A 2 21 Out-of-frame Inter-chr p13.31 q11.2 70256 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTMS-TAF3 PTMS chr12 6880109 - TAF3 chr10 8017036 + Exonic hg19 BRCA TCGA-OL-A5D7-01A 2 67 Out-of-frame Inter-chr p13.31 p14 70257 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTP4A1-EYS PTP4A1 chr6 64286890 - EYS chr6 65532715 - Exonic hg19 BRCA TCGA-E9-A2JS-01A 4 4 Out-of-frame Intra-chr q12 q12 Seq+ 70258 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTP4A2-ARFGEF2 PTP4A2 chr1 32403588 - ARFGEF2 chr20 47645067 + Exonic hg19 BLCA TCGA-5N-A9KI-01A 5 16 5'UTR-CDS Inter-chr p35.2 q13.13 Seq+ 70259 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPLAD1-AC069368.3 PTPLAD1 chr15 65823056 - AC069368.3 chr15 65223020 + Exonic hg19 BRCA TCGA-EW-A3U0-01A 18 4 Out-of-frame Intra-chr 70260 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPLAD1-URM1 PTPLAD1 chr15 65851069 - URM1 chr9 131150095 + Exonic hg19 UCEC TCGA-EY-A210-01A 166 121 In-Frame Inter-chr q34.11 Seq+ 70261 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN1-C3orf75 PTPN1 chr20 49191191 - C3orf75 chr3 47552716 - Exonic hg19 BRCA TCGA-EW-A1PC-01B 2 3 In-Frame Inter-chr q13.13 Tumor suppressor gene 70262 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN1-P2RX4 PTPN1 chr20 49127127 - P2RX4 chr12 121654937 + Exonic hg19 HNSC TCGA-CN-5364-01A 34 29 Out-of-frame Inter-chr q13.13 Tumor suppressor gene q24.31 Seq+ 70263 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN1-PREX1 PTPN1 chr20 49191191 - PREX1 chr20 47361684 - Exonic hg19 BRCA TCGA-E2-A15E-06A 5 9 In-Frame Intra-chr q13.13 Tumor suppressor gene q13.13 Seq+ 70264 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN1-PRR11 PTPN1 chr20 49185015 - PRR11 chr17 57247109 + Exonic hg19 STAD TCGA-D7-A6EZ-01A 2 7 CDS-5'UTR Inter-chr q13.13 Tumor suppressor gene q22 70265 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN1-SLC9A8 PTPN1 chr20 49127127 - SLC9A8 chr20 48481265 + Exonic hg19 BRCA TCGA-C8-A1HN-01A 15 16 Out-of-frame Intra-chr q13.13 Tumor suppressor gene q13.13 Seq+ 70266 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN11-CUX2 PTPN11 chr12 112910844 - CUX2 chr12 111779584 + Exonic hg19 UCS TCGA-N6-A4VG-01A 2 9 In-Frame Intra-chr q24.13 Oncogene Tumor suppressor gene q24.11 Transcription factor Seq+ 70267 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN11-EPYC PTPN11 chr12 112893867 - EPYC chr12 91372039 - Exonic hg19 SARC TCGA-DX-A1KW-01A 366 914 In-Frame Intra-chr q24.13 Oncogene Tumor suppressor gene q21.33 Seq+ 70268 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN11-PLAGL1 PTPN11 chr12 112856929 - PLAGL1 chr6 144290115 - Exonic hg19 SARC TCGA-DX-A23Z-01A 7 14 CDS-5'UTR Inter-chr q24.13 Oncogene Tumor suppressor gene q24.2 Tumor suppressor gene Transcription factor 70269 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN11-RP11-362K2.2 PTPN11 chr12 112893867 - RP11-362K2.2 chr12 59206196 + Exonic hg19 SARC TCGA-DX-A1KW-01A 122 424 Out-of-frame Intra-chr q24.13 Oncogene Tumor suppressor gene 70270 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN12-AC007000.1 PTPN12 chr7 77166962 - AC007000.1 chr7 76903011 + Exonic hg19 BLCA TCGA-4Z-AA87-01A 210 153 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q11.23 70271 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN12-AC007000.1 PTPN12 chr7 77200503 - AC007000.1 chr7 76796975 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 4 14 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q11.23 70272 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN12-AC007000.1 PTPN12 chr7 77166962 - AC007000.1 chr7 76908069 + Exonic hg19 SKCM TCGA-ER-A19T-01A 24 22 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q11.23 70273 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN12-AC007000.1 PTPN12 chr7 77230123 - AC007000.1 chr7 76922269 + Exonic hg19 STAD TCGA-HU-A4GH-01A 2 25 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q11.23 70274 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN12-AC027763.2 PTPN12 chr7 77212967 - AC027763.2 chr17 6913208 - Exonic hg19 SARC TCGA-K1-A6RT-01A 3 2 Out-of-frame Inter-chr q11.23 Tumor suppressor gene p13.1 70275 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN12-BAI1 PTPN12 chr7 77266365 - BAI1 chr8 143599499 + Exonic hg19 SKCM TCGA-EB-A82B-01A 12 9 Out-of-frame Inter-chr q11.23 Tumor suppressor gene Seq+ 70276 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN12-DYNC1I1 PTPN12 chr7 77166962 - DYNC1I1 chr7 95705369 + Exonic hg19 LGG TCGA-DU-5855-01A 175 227 In-Frame Intra-chr q11.23 Tumor suppressor gene q21.3 Seq+ 70277 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN12-PION PTPN12 chr7 77221573 - PION chr7 77035422 - Exonic hg19 ESCA TCGA-LN-A49U-01A 5 5 Out-of-frame Intra-chr q11.23 Tumor suppressor gene Seq+ 70278 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN12-RHBDD2 PTPN12 chr7 77166962 - RHBDD2 chr7 75510683 + Exonic hg19 ESCA TCGA-LN-A49L-01A 21 105 5'UTR-5'UTR Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 70279 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN13-C4orf36 PTPN13 chr4 87656899 - C4orf36 chr4 87797596 - Exonic hg19 CESC TCGA-VS-A8QC-01A 63 164 CDS-3'UTR Intra-chr q21.3 Tumor suppressor gene q21.3 Seq+ 70280 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN13-MAPK10 PTPN13 chr4 87515942 - MAPK10 chr4 87115560 - Exonic hg19 UCS TCGA-NA-A4QV-01A 2 2 5'UTR-5'UTR Intra-chr q21.3 Tumor suppressor gene q21.3 Tumor suppressor gene 70281 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN14-ANKRD44 PTPN14 chr1 214537855 - ANKRD44 chr2 197832170 - Exonic hg19 OV TCGA-23-1122-01A 8 5 CDS-3'UTR Inter-chr q41 q33.1 Seq+ 70282 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN14-NSL1 PTPN14 chr1 214625148 - NSL1 chr1 212912943 - Exonic hg19 BLCA TCGA-C4-A0F7-01A 51 27 In-Frame Intra-chr q41 q32.3 Seq+ 70283 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN2-MYL12B PTPN2 chr18 12884072 - MYL12B chr18 3277251 + Exonic hg19 LUAD TCGA-93-A4JP-01A 313 123 Out-of-frame Intra-chr p11.21 Tumor suppressor gene p11.31 Seq+ 70284 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN21-TTC8 PTPN21 chr14 89016582 - TTC8 chr14 89305796 + Exonic hg19 KIRP TCGA-HE-7130-01A 18 14 In-Frame Intra-chr q31.3 q31.3 Seq+ 70285 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN23-CCDC14 PTPN23 chr3 47437707 - CCDC14 chr3 123616460 - Exonic hg19 LIHC TCGA-BW-A5NO-01A 22 9 Out-of-frame Intra-chr p21.31 Tumor suppressor gene q21.1 Seq+ 70286 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN23-ICA1L PTPN23 chr3 47422670 - ICA1L chr2 203661687 - Exonic hg19 PRAD TCGA-HC-7078-01A 14 15 Out-of-frame Inter-chr p21.31 Tumor suppressor gene q33.2 Seq+ 70287 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN23-ISY1 PTPN23 chr3 47422670 - ISY1 chr3 128878019 - Exonic hg19 SKCM TCGA-ER-A19T-06A 7 1 In-Frame Intra-chr p21.31 Tumor suppressor gene q21.3 70288 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN23-KLHL18 PTPN23 chr3 47437707 - KLHL18 chr3 47361143 + Exonic hg19 LUAD TCGA-55-A48Y-01A 6 1 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 70289 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN23-KLHL18 PTPN23 chr3 47422670 - KLHL18 chr3 47371441 + Exonic hg19 LIHC TCGA-DD-A1EK-01A 6 3 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 70290 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN23-RTP3 PTPN23 chr3 47437707 - RTP3 chr3 46541846 + Exonic hg19 STAD TCGA-BR-4357-01A 6 4 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 70291 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN3-ASTN2 PTPN3 chr9 112207520 - ASTN2 chr9 119903757 - Exonic hg19 MESO TCGA-TS-A7OU-01B 2 2 CDS-5'UTR Intra-chr q31.3 q33.1 70292 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN4-AC069154.2 PTPN4 chr2 120517960 - AC069154.2 chr2 120395835 + Exonic hg19 STAD TCGA-CG-4475-01A 4 1 Out-of-frame Intra-chr q14.2 70293 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN4-AC069154.2 PTPN4 chr2 120567567 - AC069154.2 chr2 120409550 + Exonic hg19 UCEC TCGA-EO-A1Y7-01A 35 20 Out-of-frame Intra-chr q14.2 70294 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN4-GRID1 PTPN4 chr2 120567567 - GRID1 chr10 87489371 - Exonic hg19 LUSC TCGA-NC-A5HM-01A 4 3 In-Frame Inter-chr q14.2 q23.2 Seq+ 70295 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN4-LCT PTPN4 chr2 120567567 - LCT chr2 136590760 - Exonic hg19 BLCA TCGA-ZF-AA4T-01A 8 4 Out-of-frame Intra-chr q14.2 q21.3 70296 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN6-LEPREL2 PTPN6 chr12 7066948 - LEPREL2 chr12 6948164 + Exonic hg19 BLCA TCGA-FD-A3NA-01A 22 5 In-Frame Intra-chr p13.31 Tumor suppressor gene Seq+ 70297 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN6-LRRC23 PTPN6 chr12 7061340 - LRRC23 chr12 7014749 + Exonic hg19 BLCA TCGA-ZF-AA51-01A 6 4 CDS-5'UTR Intra-chr p13.31 Tumor suppressor gene p13.31 Seq+ 70298 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN9-AGBL1 PTPN9 chr15 75801258 - AGBL1 chr15 87217504 + Exonic hg19 BRCA TCGA-EW-A1P0-01A 15 19 In-Frame Intra-chr q24.2 q25.3 Seq+ 70299 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPN9-SLC12A1 PTPN9 chr15 75871055 - SLC12A1 chr15 48539534 + Exonic hg19 SARC TCGA-DX-A8BM-01A 2 5 In-Frame Intra-chr q24.2 q21.1 Seq+ 70300 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRA-CDK5RAP1 PTPRA chr20 2854406 - CDK5RAP1 chr20 31975339 - Exonic hg19 COAD TCGA-A6-2677-01B 3 4 5'UTR-CDS Intra-chr p13 q11.21 Seq+ 70301 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRA-N4BP1 PTPRA chr20 2998559 - N4BP1 chr16 48596355 - Exonic hg19 BRCA TCGA-A2-A3Y0-01A 4 3 In-Frame Inter-chr p13 q12.1 Seq+ 70302 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRA-PRSS1 PTPRA chr20 2854406 - PRSS1 chr7 142457330 + Exonic hg19 PAAD TCGA-F2-6880-01A 2 2 Out-of-frame Inter-chr p13 70303 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRA-SUPT16H PTPRA chr20 3019314 - SUPT16H chr14 21829491 - Exonic hg19 LGG TCGA-CS-6668-01A 2 5 Out-of-frame Inter-chr p13 q11.2 70304 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRA-TADA2A PTPRA chr20 2854406 - TADA2A chr17 35771356 + Exonic hg19 LUAD TCGA-97-A4LX-01A 5 3 5'UTR-5'UTR Inter-chr p13 q12 70305 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRD-C9orf92 PTPRD chr9 8633317 - C9orf92 chr9 16215897 - Exonic hg19 PRAD TCGA-EJ-5514-01A 16 14 Out-of-frame Intra-chr Oncogene Tumor suppressor gene p22.3 Seq+ 70306 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRD-CYGB PTPRD chr9 9938507 - CYGB chr17 74527224 - Exonic hg19 HNSC TCGA-CQ-6224-01A 18 8 5'UTR-CDS Inter-chr Oncogene Tumor suppressor gene q25.1 Tumor suppressor gene Seq+ 70307 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRD-IDO1 PTPRD chr9 8733780 - IDO1 chr8 39771408 + Exonic hg19 HNSC TCGA-CV-7407-01A 54 28 CDS-5'UTR Inter-chr Oncogene Tumor suppressor gene p11.21 Seq+ 70308 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRD-RAC2 PTPRD chr9 10612398 - RAC2 chr22 37637698 - Exonic hg19 BRCA TCGA-E9-A54X-01A 2 1 5'UTR-CDS Inter-chr Oncogene Tumor suppressor gene q13.1 Seq+ 70309 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRD-TRHDE PTPRD chr9 8314247 - TRHDE chr12 72666463 + Exonic hg19 SARC TCGA-IF-A3RQ-01A 2 2 Out-of-frame Inter-chr Oncogene Tumor suppressor gene q21.1 Seq+ 70310 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRF-C1orf222 PTPRF chr1 44003948 - C1orf222 chr1 1861775 - Exonic hg19 SKCM TCGA-EB-A551-01A 35 16 Out-of-frame Intra-chr p34.2 Seq+ 70311 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRF-DHRS4L2 PTPRF chr1 44064584 - DHRS4L2 chr14 24464241 + Exonic hg19 READ TCGA-AF-2693-01A 8 16 In-Frame Inter-chr p34.2 q11.2 Seq+ 70312 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRF-GUCA2A PTPRF chr1 44019612 - GUCA2A chr1 42629281 - Exonic hg19 BRCA TCGA-BH-A1F0-01A 46 37 Out-of-frame Intra-chr p34.2 p34.2 Seq+ 70313 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRF-HIVEP3 PTPRF chr1 44003948 - HIVEP3 chr1 42166666 - Exonic hg19 BRCA TCGA-OL-A5RZ-01A 5 8 5'UTR-5'UTR Intra-chr p34.2 p34.2 Tumor suppressor gene Transcription factor Seq+ 70314 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRF-NDUFV1 PTPRF chr1 44089334 - NDUFV1 chr11 67375697 + Exonic hg19 CESC TCGA-IR-A3LH-01A 2 11 Out-of-frame Inter-chr p34.2 q13.2 70315 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRF-PDE4B PTPRF chr1 44019612 - PDE4B chr1 66378928 + Exonic hg19 BRCA TCGA-OL-A5RZ-01A 2 2 CDS-5'UTR Intra-chr p34.2 p31.3 70316 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRG-CLASP2 PTPRG chr3 61989171 - CLASP2 chr3 33543260 - Exonic hg19 SARC TCGA-DX-A1KY-01A 4 1 In-Frame Intra-chr p14.2 p22.3 70317 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRG-FHIT PTPRG chr3 61734656 - FHIT chr3 60522712 - Exonic hg19 SKCM TCGA-D3-A3C6-06A 2 1 CDS-5'UTR Intra-chr p14.2 p14.2 Tumor suppressor gene Seq+ 70318 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRG-FHIT PTPRG chr3 62063932 - FHIT chr3 59908140 - Exonic hg19 BRCA TCGA-E9-A228-01A 2 1 In-Frame Intra-chr p14.2 p14.2 Tumor suppressor gene Seq+ 70319 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRG-FHIT PTPRG chr3 61734656 - FHIT chr3 60807705 - Exonic hg19 LIHC TCGA-RC-A6M4-01A 4 2 CDS-5'UTR Intra-chr p14.2 p14.2 Tumor suppressor gene Seq+ 70320 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRG-FHIT PTPRG chr3 61734656 - FHIT chr3 60522712 - Exonic hg19 PRAD TCGA-XQ-A8TA-01A 37 41 CDS-5'UTR Intra-chr p14.2 p14.2 Tumor suppressor gene Seq+ 70321 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRG-FRMD4B PTPRG chr3 61734656 - FRMD4B chr3 69225807 - Exonic hg19 PRAD TCGA-HC-A9TH-01A 7 7 In-Frame Intra-chr p14.2 p14.1 Seq+ 70322 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRG-MCM3AP PTPRG chr3 61734656 - MCM3AP chr21 47703752 - Exonic hg19 LUSC TCGA-70-6722-01A 12 8 In-Frame Inter-chr p14.2 q22.3 Seq+ 70323 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRG-SYNPR PTPRG chr3 61734656 - SYNPR chr3 63466508 + Exonic hg19 SKCM TCGA-EB-A24D-01A 40 23 Out-of-frame Intra-chr p14.2 p14.2 Seq+ 70324 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRH-PPP6R1 PTPRH chr19 55711604 - PPP6R1 chr19 55748338 - Exonic hg19 STAD TCGA-BR-8690-01A 4 9 Out-of-frame Intra-chr q13.42 q13.42 Seq+ 70325 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRJ-C2CD2L PTPRJ chr11 48002560 - C2CD2L chr11 118980814 + Exonic hg19 LAML TCGA-AB-2857-03A 2 1 In-Frame Intra-chr p11.2 Tumor suppressor gene q23.3 70326 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRJ-FCER1G PTPRJ chr11 48134535 - FCER1G chr1 161187776 + Exonic hg19 LUAD TCGA-38-6178-01A 9 7 In-Frame Inter-chr p11.2 Tumor suppressor gene q23.3 Seq+ 70327 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRJ-PPP2CB PTPRJ chr11 48168515 - PPP2CB chr8 30648831 - Exonic hg19 PRAD TCGA-XQ-A8TB-01A 2 5 Out-of-frame Inter-chr p11.2 Tumor suppressor gene p12 Tumor suppressor gene Seq+ 70328 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-ARHGAP18 PTPRK chr6 128505577 - ARHGAP18 chr6 129939997 - Exonic hg19 ESCA TCGA-JY-A938-01A 2 9 Out-of-frame Intra-chr Tumor suppressor gene q22.33 Seq+ 70329 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-C6orf203 PTPRK chr6 128841404 - C6orf203 chr6 107365464 + Exonic hg19 BRCA TCGA-BH-A1F0-01A 35 24 Out-of-frame Intra-chr Tumor suppressor gene q21 Seq+ 70330 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-ECHDC1 PTPRK chr6 128841404 - ECHDC1 chr6 127652175 - Exonic hg19 PRAD TCGA-EJ-5514-01A 79 48 In-Frame Intra-chr Tumor suppressor gene q22.33 Seq+ 70331 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-ECHDC1 PTPRK chr6 128561180 - ECHDC1 chr6 127611422 - Exonic hg19 PRAD TCGA-G9-6333-01A 6 23 Out-of-frame Intra-chr Tumor suppressor gene q22.33 Seq+ 70332 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-EPB41L2 PTPRK chr6 128841404 - EPB41L2 chr6 131184858 - Exonic hg19 COAD TCGA-CM-6164-01A 39 16 Out-of-frame Intra-chr Tumor suppressor gene q23.2 Seq+ 70333 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-EYA4 PTPRK chr6 128505577 - EYA4 chr6 133782252 + Exonic hg19 SKCM TCGA-EB-A5KH-06A 3 2 In-Frame Intra-chr Tumor suppressor gene q23.2 Tumor suppressor gene 70334 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-EYS PTPRK chr6 128841404 - EYS chr6 65303202 - Exonic hg19 UCEC TCGA-AJ-A3IA-01A 3 2 Out-of-frame Intra-chr Tumor suppressor gene q12 70335 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-FBXO5 PTPRK chr6 128718711 - FBXO5 chr6 153296756 - Exonic hg19 UCEC TCGA-D1-A3DH-01A 8 3 In-Frame Intra-chr Tumor suppressor gene q25.2 70336 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-HECA PTPRK chr6 128841404 - HECA chr6 139487421 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 253 163 In-Frame Intra-chr Tumor suppressor gene q24.1 Tumor suppressor gene Seq+ 70337 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-IL20RA PTPRK chr6 128841404 - IL20RA chr6 137338240 - Exonic hg19 READ TCGA-EI-7002-01A 61 40 In-Frame Intra-chr Tumor suppressor gene q23.3 Seq+ 70338 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-OXR1 PTPRK chr6 128841404 - OXR1 chr8 107531171 + Exonic hg19 BRCA TCGA-AO-A0JD-01A 4 1 Out-of-frame Inter-chr Tumor suppressor gene q23.1 70339 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-PEX5L PTPRK chr6 128505577 - PEX5L chr3 179605572 - Exonic hg19 SARC TCGA-DX-A23R-01A 5 2 Out-of-frame Inter-chr Tumor suppressor gene q26.33 Seq+ 70340 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-PLN PTPRK chr6 128643184 - PLN chr6 118879988 + Exonic hg19 BRCA TCGA-BH-A18I-01A 2 4 CDS-5'UTR Intra-chr Tumor suppressor gene q22.31 Seq+ 70341 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-POPDC3 PTPRK chr6 128718711 - POPDC3 chr6 105610035 - Exonic hg19 BLCA TCGA-ZF-A9RN-01A 5 6 CDS-5'UTR Intra-chr Tumor suppressor gene q21 Seq+ 70342 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128841404 - RSPO3 chr6 127469793 + Exonic hg19 READ TCGA-AF-6136-01A 48 16 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 70343 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128841404 - RSPO3 chr6 127469793 + Exonic hg19 COAD TCGA-CA-5255-01A 37 31 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 70344 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128841404 - RSPO3 chr6 127469793 + Exonic hg19 COAD TCGA-D5-6539-01A 86 36 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 70345 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128505577 - RSPO3 chr6 127469793 + Exonic hg19 COAD TCGA-DM-A1HB-01A 65 63 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 70346 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128841404 - RSPO3 chr6 127469793 + Exonic hg19 READ TCGA-DT-5265-01A 17 12 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 70347 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128505577 - RSPO3 chr6 127469793 + Exonic hg19 READ TCGA-G5-6233-01A 57 36 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 70348 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128505577 - RSPO3 chr6 127469793 + Exonic hg19 ESCA TCGA-JY-A938-01A 9 51 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 70349 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128841404 - RSPO3 chr6 127469793 + Exonic hg19 COAD TCGA-QG-A5YX-01A 73 41 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 70350 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-RSPO3 PTPRK chr6 128841404 - RSPO3 chr6 127469793 + Exonic hg19 STAD TCGA-VQ-AA68-01A 30 211 In-Frame Intra-chr Tumor suppressor gene q22.33 KB Pub Seq+ 70351 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-SAMD3 PTPRK chr6 128718711 - SAMD3 chr6 130505768 - Exonic hg19 BLCA TCGA-DK-AA6P-01A 3 7 Out-of-frame Intra-chr Tumor suppressor gene q23.1 Seq+ 70352 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-SMNDC1 PTPRK chr6 128561180 - SMNDC1 chr10 112058548 - Exonic hg19 CHOL TCGA-ZH-A8Y1-01A 148 102 In-Frame Inter-chr Tumor suppressor gene q25.2 Seq+ 70353 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-SPARCL1 PTPRK chr6 128505577 - SPARCL1 chr4 88420737 - Exonic hg19 BRCA TCGA-A2-A0CY-01A 8 6 CDS-5'UTR Inter-chr Tumor suppressor gene q22.1 Tumor suppressor gene Seq+ 70354 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRK-STXBP6 PTPRK chr6 128505577 - STXBP6 chr14 25326363 - Exonic hg19 BRCA TCGA-A2-A04W-01A 153 134 In-Frame Inter-chr Tumor suppressor gene q12 Seq+ 70355 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRM-ELP4 PTPRM chr18 8143777 - ELP4 chr11 31804941 + Exonic hg19 COAD TCGA-DM-A1D6-01A 14 3 Out-of-frame Inter-chr p11.23 p13 Seq+ 70356 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRM-KCTD1 PTPRM chr18 7926681 - KCTD1 chr18 24039889 - Exonic hg19 BRCA TCGA-E9-A3QA-01A 6 5 In-Frame Intra-chr p11.23 q11.2 Seq+ 70357 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRM-KIAA1468 PTPRM chr18 7955412 - KIAA1468 chr18 59911997 + Exonic hg19 LUAD TCGA-44-A47B-01A 2 1 Out-of-frame Intra-chr p11.23 q21.33 70358 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRM-MC2R PTPRM chr18 7774269 - MC2R chr18 13885645 - Exonic hg19 PRAD TCGA-HC-A8CY-01A 2 3 CDS-5'UTR Intra-chr p11.23 p11.21 Seq+ 70359 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRN2-GALNT11 PTPRN2 chr7 157959623 - GALNT11 chr7 151797883 + Exonic hg19 BRCA TCGA-AC-A62Y-01A 2 2 In-Frame Intra-chr q36.3 q36.1 70360 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRN2-IMMP2L PTPRN2 chr7 158380250 - IMMP2L chr7 111161505 - Exonic hg19 STAD TCGA-D7-8579-01A 2 19 CDS-5'UTR Intra-chr q36.3 q31.1 Seq+ 70361 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRN2-LRRC37B PTPRN2 chr7 157903521 - LRRC37B chr17 30357675 + Exonic hg19 UCEC TCGA-BK-A139-02A 2 1 In-Frame Inter-chr q36.3 q11.2 70362 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRR-C12orf54 PTPRR chr12 71158445 - C12orf54 chr12 48880471 + Exonic hg19 SKCM TCGA-EE-A2MS-06A 15 9 In-Frame Intra-chr q15 q13.11 Seq+ 70363 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRR-CHPT1 PTPRR chr12 71286459 - CHPT1 chr12 102110506 + Exonic hg19 BLCA TCGA-GC-A3RD-01A 13 7 Out-of-frame Intra-chr q15 q23.2 Seq+ 70364 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRR-CPM PTPRR chr12 71077907 - CPM chr12 69265736 - Exonic hg19 SARC TCGA-DX-A1L4-01A 11 2 In-Frame Intra-chr q15 q15 70365 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRR-FAM19A2 PTPRR chr12 71139598 - FAM19A2 chr12 62417560 - Exonic hg19 SARC TCGA-DX-AB2F-01A 2 2 CDS-5'UTR Intra-chr q15 q14.1 70366 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRR-KCNC2 PTPRR chr12 71092045 - KCNC2 chr12 75445097 - Exonic hg19 SARC TCGA-DX-AB35-01A 47 24 Out-of-frame Intra-chr q15 q21.1 Seq+ 70367 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRR-NAV3 PTPRR chr12 71077907 - NAV3 chr12 78360009 + Exonic hg19 SARC TCGA-FX-A2QS-01A 31 27 In-Frame Intra-chr q15 q21.2 Seq+ 70368 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRR-RP11-536G4.1 PTPRR chr12 71314113 - RP11-536G4.1 chr12 96216867 + Exonic hg19 SARC TCGA-DX-A3U5-01A 33 5 Out-of-frame Intra-chr q15 70369 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRR-SLC6A15 PTPRR chr12 71147971 - SLC6A15 chr12 85286087 - Exonic hg19 SARC TCGA-DX-A3LT-01A 30 9 CDS-5'UTR Intra-chr q15 q21.31 Seq+ 70370 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRR-VWC2 PTPRR chr12 71050484 - VWC2 chr7 49951630 + Exonic hg19 LGG TCGA-DU-A5TY-01A 2 3 Out-of-frame Inter-chr q15 p12.2 Seq+ 70371 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRS-ANGPTL4 PTPRS chr19 5286061 - ANGPTL4 chr19 8430838 + Exonic hg19 SARC TCGA-FX-A3NK-01A 252 21 Out-of-frame Intra-chr p13.3 p13.2 Tumor suppressor gene Seq+ 70372 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRS-MBD3 PTPRS chr19 5211601 - MBD3 chr19 1582711 - Exonic hg19 ESCA TCGA-L5-A891-01A 3 13 Out-of-frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 70373 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRS-POU2F2 PTPRS chr19 5340675 - POU2F2 chr19 42626728 - Exonic hg19 LGG TCGA-P5-A5EU-01A 2 1 5'UTR-CDS Intra-chr p13.3 q13.2 Transcription factor Seq+ 70374 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRS-TMEM8A PTPRS chr19 5340675 - TMEM8A chr16 434396 - Exonic hg19 SKCM TCGA-EE-A2GU-06A 14 19 5'UTR-5'UTR Inter-chr p13.3 p13.3 Seq+ 70375 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRS-ZNF627 PTPRS chr19 5274210 - ZNF627 chr19 11725342 + Exonic hg19 SARC TCGA-DX-A6Z0-01A 10 11 In-Frame Intra-chr p13.3 p13.2 Transcription factor Seq+ 70376 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRT-EXD2 PTPRT chr20 41385102 - EXD2 chr14 69695533 + Exonic hg19 LUAD TCGA-55-8206-01A 2 2 Out-of-frame Inter-chr q13.11 Oncogene Tumor suppressor gene q24.1 Seq+ 70377 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRT-NCOA3 PTPRT chr20 40944363 - NCOA3 chr20 46211927 + Exonic hg19 BRCA TCGA-E2-A15F-01A 86 87 CDS-5'UTR Intra-chr q13.11 Oncogene Tumor suppressor gene q13.12 Transcription factor Seq+ 70378 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRU-C8orf84 PTPRU chr1 29563229 - C8orf84 chr8 73984105 - Exonic hg19 LUAD TCGA-78-7153-01A 4 3 In-Frame Inter-chr p35.3 70379 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRU-KAZN PTPRU chr1 29602268 - KAZN chr1 14925479 + Exonic hg19 UCEC TCGA-2E-A9G8-01A 2 1 Out-of-frame Intra-chr p35.3 p36.21 Seq+ 70380 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRU-NOS1AP PTPRU chr1 29618538 - NOS1AP chr1 162124195 + Exonic hg19 KIRC TCGA-B0-4698-01A 3 6 Out-of-frame Intra-chr p35.3 q23.3 Seq+ 70381 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRZ1-DOCK4 PTPRZ1 chr7 121624171 - DOCK4 chr7 111644186 - Exonic hg19 SKCM TCGA-EE-A20I-06A 4 2 In-Frame Intra-chr q31.32 q31.1 Seq+ 70382 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRZ1-FYN PTPRZ1 chr7 121684622 - FYN chr6 112062296 - Exonic hg19 LGG TCGA-DH-5144-01A 2 79 Out-of-frame Inter-chr q31.32 q21 TK:Src 70383 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRZ1-MDFIC PTPRZ1 chr7 121608184 - MDFIC chr7 114582330 + Exonic hg19 STAD TCGA-D7-8576-01A 2 2 In-Frame Intra-chr q31.32 q31.1 70384 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRZ1-MET PTPRZ1 chr7 121513611 - MET chr7 116339125 + Exonic hg19 GBM TCGA-06-5417-01A 2 2 CDS-5'UTR Intra-chr q31.32 q31.2 TK:Met Oncogene Pub Seq+ 70385 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRZ1-MET PTPRZ1 chr7 121513611 - MET chr7 116339125 + Exonic hg19 LGG TCGA-DU-6407-02B 596 321 CDS-5'UTR Intra-chr q31.32 q31.2 TK:Met Oncogene Pub Seq+ 70386 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRZ1-SRRM3 PTPRZ1 chr7 121568275 - SRRM3 chr7 75864346 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 3 1 CDS-5'UTR Intra-chr q31.32 q11.23 Seq+ 70387 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRZ1-TSPAN33 PTPRZ1 chr7 121695141 - TSPAN33 chr7 128801520 + Exonic hg19 HNSC TCGA-CV-5434-01A 58 32 In-Frame Intra-chr q31.32 q32.1 Seq+ 70388 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTPRZ1-UBE2H PTPRZ1 chr7 121668697 - UBE2H chr7 129479175 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 2 3 In-Frame Intra-chr q31.32 q32.2 Seq+ 70389 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTRF-HEATR6 PTRF chr17 40574645 - HEATR6 chr17 58125749 - Exonic hg19 LIHC TCGA-DD-AADC-01A 4 2 In-Frame Intra-chr q23.1 Seq+ 70390 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTRH2-PEX5L PTRH2 chr17 57784732 - PEX5L chr3 179576945 - Exonic hg19 BRCA TCGA-AQ-A04H-01B 4 10 5'UTR-CDS Inter-chr q23.1 q26.33 Seq+ 70391 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTRH2-STXBP4 PTRH2 chr17 57784732 - STXBP4 chr17 53218671 + Exonic hg19 BRCA TCGA-C8-A135-01A 2 4 5'UTR-CDS Intra-chr q23.1 q22 Seq+ 70392 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTTG1IP-CLDN4 PTTG1IP chr21 46269500 - CLDN4 chr7 73245193 + Exonic hg19 PRAD TCGA-EJ-7784-01A 2 1 3'UTR-5'UTR Inter-chr q22.3 q11.23 70393 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PTTG1IP-SIM2 PTTG1IP chr21 46293417 - SIM2 chr21 38081468 + Exonic hg19 BRCA TCGA-BH-A1EY-01A 5 6 In-Frame Intra-chr q22.3 q22.13 Transcription factor Seq+ 70394 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUM1-CSMD2 PUM1 chr1 31465237 - CSMD2 chr1 34312597 - Exonic hg19 BRCA TCGA-AR-A1AT-01A 4 1 Out-of-frame Intra-chr p35.2 p35.1 70395 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUM1-EIF4G3 PUM1 chr1 31532051 - EIF4G3 chr1 21329301 - Exonic hg19 LUSC TCGA-34-5239-01A 2 4 CDS-5'UTR Intra-chr p35.2 p36.12 Seq+ 70396 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUM1-GFPT1 PUM1 chr1 31452909 - GFPT1 chr2 69601245 - Exonic hg19 PRAD TCGA-J4-A6G3-01A 2 1 In-Frame Inter-chr p35.2 p13.3 70397 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUM1-HNRNPR PUM1 chr1 31532051 - HNRNPR chr1 23648156 - Exonic hg19 SARC TCGA-IS-A3KA-01A 3 1 In-Frame Intra-chr p35.2 70398 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUM1-HS2ST1 PUM1 chr1 31532051 - HS2ST1 chr1 87538617 + Exonic hg19 SKCM TCGA-EB-A82C-01A 14 6 Out-of-frame Intra-chr p35.2 p22.3 Seq+ 70399 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUM1-KIAA1211 PUM1 chr1 31465237 - KIAA1211 chr4 57189543 + Exonic hg19 HNSC TCGA-BB-7861-01A 9 10 Out-of-frame Inter-chr p35.2 q12 Seq+ 70400 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUM1-NKAIN1 PUM1 chr1 31532051 - NKAIN1 chr1 31661034 - Exonic hg19 LUAD TCGA-38-4631-01A 50 37 In-Frame Intra-chr p35.2 p35.2 Seq+ 70401 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUM1-NKAIN1 PUM1 chr1 31422980 - NKAIN1 chr1 31661034 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 3 2 In-Frame Intra-chr p35.2 p35.2 Seq+ 70402 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUM1-NKAIN1 PUM1 chr1 31422980 - NKAIN1 chr1 31661034 - Exonic hg19 UCEC TCGA-FI-A3PX-01A 42 35 In-Frame Intra-chr p35.2 p35.2 Seq+ 70403 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUM1-PLAG1 PUM1 chr1 31538463 - PLAG1 chr8 57092072 - Exonic hg19 SARC TCGA-PT-A8TR-01A 27 32 5'UTR-5'UTR Inter-chr p35.2 q12.1 Oncogene Transcription factor Seq+ 70404 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUM1-PQLC2 PUM1 chr1 31532051 - PQLC2 chr1 19644094 + Exonic hg19 BLCA TCGA-LC-A66R-01A 6 1 CDS-5'UTR Intra-chr p35.2 p36.13 70405 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUM1-PTPRK PUM1 chr1 31479841 - PTPRK chr6 128643455 - Exonic hg19 BRCA TCGA-BH-A1F6-01A 35 13 In-Frame Inter-chr p35.2 Tumor suppressor gene Seq+ 70406 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUM1-RAP1A PUM1 chr1 31501643 - RAP1A chr1 112170092 + Exonic hg19 CESC TCGA-BI-A0VR-01A 4 2 CDS-5'UTR Intra-chr p35.2 p13.2 Tumor suppressor gene 70407 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUM1-RNF207 PUM1 chr1 31452909 - RNF207 chr1 6266236 + Exonic hg19 COAD TCGA-D5-5537-01A 7 10 CDS-5'UTR Intra-chr p35.2 p36.31 Seq+ 70408 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUM1-RPH3AL PUM1 chr1 31532051 - RPH3AL chr17 169340 - Exonic hg19 BRCA TCGA-AQ-A04J-01A 18 5 Out-of-frame Inter-chr p35.2 Seq+ 70409 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUM1-SDCCAG8 PUM1 chr1 31501643 - SDCCAG8 chr1 243493842 + Exonic hg19 PRAD TCGA-EJ-5527-01A 12 4 In-Frame Intra-chr p35.2 Seq+ 70410 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUM1-SNRNP40 PUM1 chr1 31532051 - SNRNP40 chr1 31744346 - Exonic hg19 UCEC TCGA-EO-A1Y7-01A 8 5 In-Frame Intra-chr p35.2 p35.2 Seq+ 70411 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUM1-YARS PUM1 chr1 31532051 - YARS chr1 33276658 - Exonic hg19 ESCA TCGA-JY-A6FH-01A 42 204 In-Frame Intra-chr p35.2 p35.1 Seq+ 70412 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUM2-C2orf43 PUM2 chr2 20490413 - C2orf43 chr2 20884683 - Exonic hg19 GBM TCGA-14-0789-01A 3 24 CDS-3'UTR Intra-chr p24.1 Seq+ 70413 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUM2-C2orf43 PUM2 chr2 20478344 - C2orf43 chr2 20886854 - Exonic hg19 LUSC TCGA-77-A5GH-01A 19 8 Out-of-frame Intra-chr p24.1 Seq+ 70414 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUM2-FAM49A PUM2 chr2 20494137 - FAM49A chr2 16769397 - Exonic hg19 PRAD TCGA-CH-5794-01A 9 8 CDS-5'UTR Intra-chr p24.1 p24.2 Seq+ 70415 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUM2-FAM54B PUM2 chr2 20550358 - FAM54B chr1 26158412 + Exonic hg19 PRAD TCGA-2A-A8VL-01A 30 10 5'UTR-CDS Inter-chr p24.1 70416 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUM2-HS1BP3 PUM2 chr2 20518298 - HS1BP3 chr2 20845265 - Exonic hg19 BRCA TCGA-A8-A06O-01A 46 24 Out-of-frame Intra-chr p24.1 p24.1 Seq+ 70417 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUM2-IL1RN PUM2 chr2 20478344 - IL1RN chr2 113868693 + Exonic hg19 BRCA TCGA-D8-A1XJ-01A 3 4 CDS-5'UTR Intra-chr p24.1 q14.1 70418 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUM2-MIPOL1 PUM2 chr2 20507739 - MIPOL1 chr14 37969113 + Exonic hg19 PCPG TCGA-QT-A5XP-01A 6 7 Out-of-frame Inter-chr p24.1 q13.3 Seq+ 70419 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUM2-TTLL4 PUM2 chr2 20550358 - TTLL4 chr2 219591992 + Exonic hg19 LIHC TCGA-BC-A10Y-01A 7 2 5'UTR-5'UTR Intra-chr p24.1 q35 Seq+ 70420 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUS1-CTNNBIP1 PUS1 chr12 132416857 - CTNNBIP1 chr1 9938047 - Exonic hg19 LUSC TCGA-56-8625-01A 15 6 CDS-5'UTR Inter-chr q24.33 p36.22 Tumor suppressor gene Seq+ 70421 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUS1-SFSWAP PUS1 chr12 132423820 - SFSWAP chr12 132250663 + Exonic hg19 BRCA TCGA-E2-A108-01A 3 1 In-Frame Intra-chr q24.33 q24.33 Seq+ 70422 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUS7L-C12orf70 PUS7L chr12 44148139 - C12orf70 chr12 27648613 + Exonic hg19 LUAD TCGA-MP-A4T6-01A 2 3 Out-of-frame Intra-chr q12 Seq+ 70423 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PUSL1-AGRN PUSL1 chr1 1245231 - AGRN chr1 970657 + Exonic hg19 LUSC TCGA-66-2756-01A 5 3 Out-of-frame Intra-chr p36.33 p36.33 70424 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PVR-HPN PVR chr19 45162033 - HPN chr19 35556154 + Exonic hg19 OV TCGA-25-1324-01A 15 70 In-Frame Intra-chr q13.31 q13.11 Seq+ 70425 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PVR-IGSF23 PVR chr19 45157286 - IGSF23 chr19 45127004 + Exonic hg19 LIHC TCGA-BC-A217-01A 43 31 In-Frame Intra-chr q13.31 q13.31 Seq+ 70426 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PVR-SIRT2 PVR chr19 45147475 - SIRT2 chr19 39372131 - Exonic hg19 UCS TCGA-N7-A4Y8-01A 5 4 In-Frame Intra-chr q13.31 Tumor suppressor gene Seq+ 70427 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PVR-ZNF233 PVR chr19 45150842 - ZNF233 chr19 44768467 + Exonic hg19 UCEC TCGA-B5-A5OE-01A 22 19 CDS-5'UTR Intra-chr q13.31 q13.31 Transcription factor Seq+ 70428 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PVRL2-CCL21 PVRL2 chr19 45349870 - CCL21 chr9 34709894 - Exonic hg19 LIHC TCGA-ED-A7XO-01A 35 30 In-Frame Inter-chr p13.3 Seq+ 70429 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PVRL2-CEACAM19 PVRL2 chr19 45349870 - CEACAM19 chr19 45175868 + Exonic hg19 UCEC TCGA-EY-A4KR-01A 19 17 In-Frame Intra-chr q13.31 70430 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PVRL2-IGSF23 PVRL2 chr19 45368917 - IGSF23 chr19 45138701 + Exonic hg19 BLCA TCGA-UY-A8OB-01A 69 46 Out-of-frame Intra-chr q13.31 Seq+ 70431 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PVRL2-ZMAT2 PVRL2 chr19 45377735 - ZMAT2 chr5 140083503 + Exonic hg19 LUAD TCGA-62-A46V-01A 4 5 Out-of-frame Inter-chr q31.3 Seq+ 70432 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PVRL3-KCNMB3 PVRL3 chr3 110866331 - KCNMB3 chr3 178968722 - Exonic hg19 MESO TCGA-XT-AASU-01A 3 1 Out-of-frame Intra-chr q26.32 70433 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PVRL4-PFDN2 PVRL4 chr1 161059008 - PFDN2 chr1 161072165 - Exonic hg19 LUAD TCGA-49-AARQ-01A 21 23 Out-of-frame Intra-chr q23.3 Seq+ 70434 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PWP1-CCDC63 PWP1 chr12 108098524 - CCDC63 chr12 111330880 + Exonic hg19 SARC TCGA-DX-A1KW-01A 378 345 In-Frame Intra-chr q23.3 q24.11 Seq+ 70435 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PWP2-SFSWAP PWP2 chr21 45537844 - SFSWAP chr12 132271008 + Exonic hg19 BRCA TCGA-A8-A08J-01A 51 24 In-Frame Inter-chr q22.3 q24.33 Seq+ 70436 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PWWP2A-IQGAP2 PWWP2A chr5 159545812 - IQGAP2 chr5 75858221 + Exonic hg19 BRCA TCGA-AR-A0U2-01A 31 26 In-Frame Intra-chr q33.3 q13.3 Tumor suppressor gene Seq+ 70437 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PXDN-UTRN PXDN chr2 1635659 - UTRN chr6 144665237 + Exonic hg19 BLCA TCGA-FD-A3SP-01A 2 7 3'UTR-CDS Inter-chr p25.3 q24.2 70438 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PXDNL-USP8 PXDNL chr8 52252184 - USP8 chr15 50769473 + Exonic hg19 SKCM TCGA-ER-A19T-01A 26 13 Out-of-frame Inter-chr q11.23 q21.2 Seq+ 70439 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PXDNL-USP8 PXDNL chr8 52252184 - USP8 chr15 50769473 + Exonic hg19 SKCM TCGA-ER-A19T-06A 9 6 Out-of-frame Inter-chr q11.23 q21.2 Seq+ 70440 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PXK-FLNB PXK chr3 58318817 - FLNB chr3 58145281 + Exonic hg19 LIHC TCGA-DD-A73F-01A 56 20 In-Frame Intra-chr p14.3 p14.3 Seq+ 70441 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PXK-RPP14 PXK chr3 58318817 - RPP14 chr3 58296036 + Exonic hg19 OV TCGA-13-0893-01B 5 2 CDS-5'UTR Intra-chr p14.3 p14.3 Seq+ 70442 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PXK-RPP14 PXK chr3 58318817 - RPP14 chr3 58296234 + Exonic hg19 ACC TCGA-PK-A5HA-01A 12 2 Out-of-frame Intra-chr p14.3 p14.3 Seq+ 70443 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PXN-COQ5 PXN chr12 120703420 - COQ5 chr12 120942786 - Exonic hg19 STAD TCGA-CD-A4MH-01A 2 11 Out-of-frame Intra-chr q24.23 q24.31 Seq+ 70444 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PXN-MSI1 PXN chr12 120703420 - MSI1 chr12 120802558 - Exonic hg19 LUAD TCGA-55-7570-01A 4 2 Out-of-frame Intra-chr q24.23 q24.31 Seq+ 70445 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PXN-MSI1 PXN chr12 120659426 - MSI1 chr12 120780908 - Exonic hg19 HNSC TCGA-CV-7253-01A 131 63 CDS-3'UTR Intra-chr q24.23 q24.31 Seq+ 70446 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PXN-MYBPC1 PXN chr12 120703420 - MYBPC1 chr12 102041823 + Exonic hg19 LGG TCGA-E1-5303-01A 7 5 In-Frame Intra-chr q24.23 q23.2 Seq+ 70447 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PXN-PLA2G1B PXN chr12 120703420 - PLA2G1B chr12 120763823 - Exonic hg19 ESCA TCGA-L5-A891-01A 8 5 In-Frame Intra-chr q24.23 q24.31 Seq+ 70448 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PXN-PLA2G1B PXN chr12 120703420 - PLA2G1B chr12 120763823 - Exonic hg19 ACC TCGA-OR-A5LO-01A 91 181 In-Frame Intra-chr q24.23 q24.31 Seq+ 70449 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PXN-PLA2G1B PXN chr12 120703420 - PLA2G1B chr12 120760120 - Exonic hg19 KIRP TCGA-SX-A7SM-01A 8 6 In-Frame Intra-chr q24.23 q24.31 Seq+ 70450 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PYCR1-BRI3BP PYCR1 chr17 79894624 - BRI3BP chr12 125497080 + Exonic hg19 SARC TCGA-DX-A6B9-01A 6 3 Out-of-frame Inter-chr q25.3 q24.31 Seq+ 70451 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PYCR1-NOTUM PYCR1 chr17 79893213 - NOTUM chr17 79916871 - Exonic hg19 BRCA TCGA-AN-A0FX-01A 10 5 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 70452 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PYGB-C20orf152 PYGB chr20 25273249 - C20orf152 chr20 34575317 + Exonic hg19 COAD TCGA-AA-3660-01A 285 164 In-Frame Intra-chr p11.21 Seq+ 70453 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PYGB-PCSK2 PYGB chr20 25263913 - PCSK2 chr20 17410080 + Exonic hg19 BLCA TCGA-E7-A97Q-01A 4 1 Out-of-frame Intra-chr p11.21 p12.1 70454 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PYGL-TRIM9 PYGL chr14 51374989 - TRIM9 chr14 51444071 - Exonic hg19 LUSC TCGA-37-4130-01A 2 2 In-Frame Intra-chr q22.1 q22.1 Seq+ 70455 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PYGO1-FBN1 PYGO1 chr15 55880033 - FBN1 chr15 48791235 - Exonic hg19 SARC TCGA-FX-A3TO-01A 24 4 Out-of-frame Intra-chr q21.3 q21.1 Seq+ 70456 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq PZP-CPNE4 PZP chr12 9333579 - CPNE4 chr3 131442469 - Exonic hg19 BRCA TCGA-E2-A14R-01A 4 1 In-Frame Inter-chr p13.31 q22.1 Seq+ 70457 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq QARS-USP19 QARS chr3 49135625 - USP19 chr3 49150062 - Exonic hg19 BRCA TCGA-AO-A0J2-01A 86 61 In-Frame Intra-chr p21.31 p21.31 Seq+ 70458 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq QKI-ATG5 QKI chr6 163836367 - ATG5 chr6 106764141 - Exonic hg19 PRAD TCGA-HC-A631-01A 9 4 CDS-5'UTR Intra-chr q26 q21 70459 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq QKI-PACRG QKI chr6 163899928 - PACRG chr6 163733811 + Exonic hg19 OV TCGA-24-1842-01A 4 6 Out-of-frame Intra-chr q26 q26 Tumor suppressor gene Seq+ 70460 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq QKI-PACRG QKI chr6 163836367 - PACRG chr6 163483182 + Exonic hg19 LUSC TCGA-33-6738-01A 2 1 Out-of-frame Intra-chr q26 q26 Tumor suppressor gene Seq+ 70461 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq QKI-PACRG QKI chr6 163836367 - PACRG chr6 163483182 + Exonic hg19 LUAD TCGA-55-8301-01A 5 2 Out-of-frame Intra-chr q26 q26 Tumor suppressor gene Seq+ 70462 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq QKI-PACRG QKI chr6 163899928 - PACRG chr6 163483182 + Exonic hg19 BRCA TCGA-AN-A0XU-01A 50 41 In-Frame Intra-chr q26 q26 Tumor suppressor gene Seq+ 70463 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq QKI-PACRG QKI chr6 163899928 - PACRG chr6 163483182 + Exonic hg19 BRCA TCGA-E9-A1ND-01A 66 29 In-Frame Intra-chr q26 q26 Tumor suppressor gene Seq+ 70464 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq QKI-PACRG QKI chr6 163899928 - PACRG chr6 163483182 + Exonic hg19 BRCA TCGA-EW-A1OV-01A 2 1 In-Frame Intra-chr q26 q26 Tumor suppressor gene Seq+ 70465 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq QKI-ZNF214 QKI chr6 163836367 - ZNF214 chr11 7024086 - Exonic hg19 BRCA TCGA-A2-A0CM-01A 3 2 CDS-5'UTR Inter-chr q26 p15.4 Transcription factor 70466 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq QPCTL-ETHE1 QPCTL chr19 46198976 - ETHE1 chr19 44015718 - Exonic hg19 LGG TCGA-HT-7470-01A 7 5 In-Frame Intra-chr q13.32 q13.31 70467 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq QRICH1-C3orf62 QRICH1 chr3 49069616 - C3orf62 chr3 49311573 - Exonic hg19 DLBC TCGA-G8-6909-01A 20 17 In-Frame Intra-chr p21.31 p21.31 Seq+ 70468 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq QRICH1-TRAIP QRICH1 chr3 49114142 - TRAIP chr3 49869501 - Exonic hg19 LIHC TCGA-DD-AAD0-01A 7 2 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 70469 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq QRICH1-USP4 QRICH1 chr3 49114142 - USP4 chr3 49343321 - Exonic hg19 LIHC TCGA-2Y-A9GZ-01A 21 5 In-Frame Intra-chr p21.31 p21.31 Seq+ 70470 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq QSER1-GAS2 QSER1 chr11 32914880 - GAS2 chr11 22747838 + Exonic hg19 BRCA TCGA-B6-A0WT-01A 6 10 5'UTR-CDS Intra-chr p13 p14.3 Seq+ 70471 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq QSER1-PRRG4 QSER1 chr11 32914880 - PRRG4 chr11 32874842 + Exonic hg19 BLCA TCGA-GC-A3RB-01A 4 1 5'UTR-CDS Intra-chr p13 p13 Seq+ 70472 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq QSOX2-CTU2 QSOX2 chr9 139137322 - CTU2 chr16 88781268 + Exonic hg19 ACC TCGA-OR-A5JP-01A 19 4 Out-of-frame Inter-chr q34.3 q24.3 Seq+ 70473 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq R3HCC1-ENTPD4 R3HCC1 chr8 23146666 - ENTPD4 chr8 23243558 - Exonic hg19 STAD TCGA-BR-A4PE-01A 3 121 Out-of-frame Intra-chr p21.3 p21.3 Seq+ 70474 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq R3HCC1-GRIK5 R3HCC1 chr8 23147982 - GRIK5 chr19 42526506 - Exonic hg19 ESCA TCGA-L5-A891-01A 4 7 In-Frame Inter-chr p21.3 q13.2 Seq+ 70475 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq R3HDM2-ANKRD24 R3HDM2 chr12 57789532 - ANKRD24 chr19 4212472 + Exonic hg19 PRAD TCGA-ZG-A9KY-01A 11 12 5'UTR-CDS Inter-chr q13.3 p13.3 Seq+ 70476 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq R3HDM2-AVIL R3HDM2 chr12 57677607 - AVIL chr12 58208009 - Exonic hg19 LUAD TCGA-49-AAR0-01A 55 63 Out-of-frame Intra-chr q13.3 q14.1 70477 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq R3HDM2-C6orf186 R3HDM2 chr12 57789532 - C6orf186 chr6 110644075 - Exonic hg19 SKCM TCGA-EB-A44Q-06A 20 9 Out-of-frame Inter-chr q13.3 70478 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq R3HDM2-CAPRIN2 R3HDM2 chr12 57789532 - CAPRIN2 chr12 30894040 - Exonic hg19 LUAD TCGA-86-7954-01A 13 16 5'UTR-CDS Intra-chr q13.3 p11.21 Seq+ 70479 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq R3HDM2-GLI1 R3HDM2 chr12 57789532 - GLI1 chr12 57858456 + Exonic hg19 LGG TCGA-FG-A70Z-01A 6 1 5'UTR-5'UTR Intra-chr q13.3 q13.3 Tumor suppressor gene Transcription factor Seq+ 70480 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq R3HDM2-KIF21A R3HDM2 chr12 57789532 - KIF21A chr12 39705355 - Exonic hg19 SARC TCGA-DX-AB2H-01A 37 81 5'UTR-CDS Intra-chr q13.3 q12 Seq+ 70481 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq R3HDM2-KIF5A R3HDM2 chr12 57789532 - KIF5A chr12 57957222 + Exonic hg19 LGG TCGA-TM-A84B-01A 451 433 5'UTR-CDS Intra-chr q13.3 q13.3 Seq+ 70482 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq R3HDM2-NTN4 R3HDM2 chr12 57789532 - NTN4 chr12 96077487 - Exonic hg19 SARC TCGA-X6-A8C6-01A 5 9 5'UTR-CDS Intra-chr q13.3 q22 Seq+ 70483 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq R3HDM2-PIP4K2C R3HDM2 chr12 57689182 - PIP4K2C chr12 57989671 + Exonic hg19 GBM TCGA-06-0174-01A 75 303 In-Frame Intra-chr q13.3 q13.3 Seq+ 70484 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq R3HDM2-PPM1H R3HDM2 chr12 57789532 - PPM1H chr12 63131366 - Exonic hg19 SKCM TCGA-GN-A26D-06A 17 13 5'UTR-CDS Intra-chr q13.3 q14.2 Seq+ 70485 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq R3HDM2-RP11-571M6.15 R3HDM2 chr12 57789532 - RP11-571M6.15 chr12 58176893 + Exonic hg19 GBM TCGA-06-2570-01A 7 23 Out-of-frame Intra-chr q13.3 70486 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq R3HDM2-SORBS2 R3HDM2 chr12 57704047 - SORBS2 chr4 186696520 - Exonic hg19 GBM TCGA-06-0178-01A 2 9 CDS-5'UTR Inter-chr q13.3 q35.1 Seq+ 70487 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq R3HDM2-SUPT6H R3HDM2 chr12 57789532 - SUPT6H chr17 27020714 + Exonic hg19 BRCA TCGA-GI-A2C8-01A 9 11 5'UTR-CDS Inter-chr q13.3 q11.2 Seq+ 70488 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq R3HDM2-USP15 R3HDM2 chr12 57789532 - USP15 chr12 62749112 + Exonic hg19 SKCM TCGA-EB-A44Q-06A 4 5 5'UTR-CDS Intra-chr q13.3 q14.1 Seq+ 70489 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq R3HDM2-XRCC6BP1 R3HDM2 chr12 57660514 - XRCC6BP1 chr12 58339411 + Exonic hg19 GBM TCGA-02-2485-01A 4 7 In-Frame Intra-chr q13.3 Seq+ 70490 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq R3HDM2-ZNF385A R3HDM2 chr12 57704047 - ZNF385A chr12 54769738 - Exonic hg19 BLCA TCGA-XF-AAMY-01A 39 17 In-Frame Intra-chr q13.3 q13.13 Transcription factor Seq+ 70491 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB10-NCOA1 RAB10 chr2 26257604 - NCOA1 chr2 24866835 + Exonic hg19 BRCA TCGA-BH-A5J0-01A 8 4 CDS-5'UTR Intra-chr p23.3 p23.3 Oncogene Transcription factor Seq+ 70492 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB10-SDC1 RAB10 chr2 26350820 - SDC1 chr2 20405185 - Exonic hg19 BRCA TCGA-BH-A5J0-01A 10 4 In-Frame Intra-chr p23.3 p24.1 70493 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB11A-PPP6R3 RAB11A chr15 66161963 - PPP6R3 chr11 68377372 + Exonic hg19 CESC TCGA-ZJ-A8QR-01A 116 50 Out-of-frame Inter-chr q22.31 q13.2 Seq+ 70494 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB11B-ANGPTL4 RAB11B chr19 8467449 - ANGPTL4 chr19 8438589 + Exonic hg19 LIHC TCGA-ZP-A9D0-01A 29 12 In-Frame Intra-chr p13.2 p13.2 Tumor suppressor gene Seq+ 70495 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB11FIP1-HTRA4 RAB11FIP1 chr8 37727938 - HTRA4 chr8 38836734 + Exonic hg19 BRCA TCGA-BH-A0EI-01A 62 60 In-Frame Intra-chr p11.23 p11.22 Seq+ 70496 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB11FIP1-KCNU1 RAB11FIP1 chr8 37756589 - KCNU1 chr8 36763226 + Exonic hg19 BLCA TCGA-FT-A3EE-01A 66 51 In-Frame Intra-chr p11.23 p11.23 Seq+ 70497 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB11FIP1-UNC5D RAB11FIP1 chr8 37734627 - UNC5D chr8 35647877 + Exonic hg19 BRCA TCGA-S3-A6ZH-01A 130 18 Out-of-frame Intra-chr p11.23 p12 Tumor suppressor gene Seq+ 70498 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB11FIP1-ZDHHC24 RAB11FIP1 chr8 37756589 - ZDHHC24 chr11 66294477 - Exonic hg19 BRCA TCGA-AO-A1KT-01A 69 22 CDS-3'UTR Inter-chr p11.23 q13.2 Seq+ 70499 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB11FIP3-NAA60 RAB11FIP3 chr16 560800 - NAA60 chr16 3526222 + Exonic hg19 BRCA TCGA-D8-A27L-01A 2 2 CDS-5'UTR Intra-chr p13.3 70500 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB11FIP3-RGS11 RAB11FIP3 chr16 541268 - RGS11 chr16 325333 - Exonic hg19 LUSC TCGA-58-8386-01A 14 7 Out-of-frame Intra-chr p13.3 Seq+ 70501 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB11FIP4-ACCN1 RAB11FIP4 chr17 29761140 - ACCN1 chr17 31351032 - Exonic hg19 BLCA TCGA-FD-A43N-01A 5 2 Out-of-frame Intra-chr q11.2 70502 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB11FIP4-ARHGAP23 RAB11FIP4 chr17 29852248 - ARHGAP23 chr17 36614346 + Exonic hg19 PRAD TCGA-G9-A9S0-01A 2 5 Out-of-frame Intra-chr q11.2 q12 Seq+ 70503 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB12-FAM19A2 RAB12 chr18 8633325 - FAM19A2 chr12 62261207 - Exonic hg19 BRCA TCGA-BH-A0E2-01A 5 7 CDS-5'UTR Inter-chr p11.22 q14.1 Seq+ 70504 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB12-PPP4R1 RAB12 chr18 8609951 - PPP4R1 chr18 9577189 - Exonic hg19 LUAD TCGA-44-3918-01A 8 7 Out-of-frame Intra-chr p11.22 p11.22 Seq+ 70505 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB14-STOM RAB14 chr9 123963917 - STOM chr9 124111601 - Exonic hg19 LUAD TCGA-44-7660-01A 10 11 5'UTR-CDS Intra-chr q33.2 q33.2 Seq+ 70506 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB17-HDAC4 RAB17 chr2 238494641 - HDAC4 chr2 239976529 - Exonic hg19 LIHC TCGA-KR-A7K8-01A 3 5 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 70507 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB18-C11orf41 RAB18 chr10 27798859 - C11orf41 chr11 33573654 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 7 2 In-Frame Inter-chr p12.1 70508 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB1A-C7orf50 RAB1A chr2 65357027 - C7orf50 chr7 1040187 - Exonic hg19 STAD TCGA-BR-8289-01A 10 101 In-Frame Inter-chr p14 p22.3 Seq+ 70509 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB1A-PHTF2 RAB1A chr2 65325105 - PHTF2 chr7 77522925 + Exonic hg19 BRCA TCGA-AR-A0U4-01A 12 21 In-Frame Inter-chr p14 q11.23 Seq+ 70510 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB1B-MTMR2 RAB1B chr11 66036164 - MTMR2 chr11 95598840 - Exonic hg19 LUAD TCGA-55-8615-01A 7 5 Out-of-frame Intra-chr q13.2 q21 Seq+ 70511 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB1B-XBP1 RAB1B chr11 66044100 - XBP1 chr22 29196544 - Exonic hg19 LUAD TCGA-78-7148-01A 2 1 Out-of-frame Inter-chr q13.2 q12.1 Transcription factor 70512 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB21-DNM3 RAB21 chr12 72149068 - DNM3 chr1 172050972 + Exonic hg19 SARC TCGA-SG-A6Z7-01A 315 132 In-Frame Inter-chr q21.1 q24.3 Seq+ 70513 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB21-FRS2 RAB21 chr12 72167802 - FRS2 chr12 69955960 + Exonic hg19 SARC TCGA-DX-A1L0-01A 17 9 CDS-5'UTR Intra-chr q21.1 q15 Seq+ 70514 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB21-MDM1 RAB21 chr12 72164479 - MDM1 chr12 68696652 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 16 13 In-Frame Intra-chr q21.1 q15 Seq+ 70515 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB21-MGAT4C RAB21 chr12 72167802 - MGAT4C chr12 86443501 - Exonic hg19 SARC TCGA-SG-A6Z7-01A 3 7 CDS-5'UTR Intra-chr q21.1 Seq+ 70516 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB21-MYBPC1 RAB21 chr12 72149068 - MYBPC1 chr12 102023212 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 16 8 Out-of-frame Intra-chr q21.1 q23.2 Seq+ 70517 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB21-SLC4A8 RAB21 chr12 72167802 - SLC4A8 chr12 51863398 + Exonic hg19 SARC TCGA-SG-A6Z7-01A 24 39 Out-of-frame Intra-chr q21.1 q13.13 Seq+ 70518 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB27A-NEDD4 RAB27A chr15 55562363 - NEDD4 chr15 56166206 - Exonic hg19 BRCA TCGA-C8-A12V-01A 6 4 5'UTR-CDS Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 70519 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB27A-SQRDL RAB27A chr15 55562363 - SQRDL chr15 45968299 + Exonic hg19 BRCA TCGA-AO-A03P-01A 48 47 5'UTR-CDS Intra-chr q21.3 Seq+ 70520 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB27B-C6orf145 RAB27B chr18 52495931 - C6orf145 chr6 3727896 - Exonic hg19 BRCA TCGA-AC-A23C-01A 32 26 Out-of-frame Inter-chr q21.2 70521 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB27B-WDR7 RAB27B chr18 52495931 - WDR7 chr18 54547175 + Exonic hg19 BLCA TCGA-DK-AA6R-01A 12 5 5'UTR-CDS Intra-chr q21.2 q21.31 Seq+ 70522 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB28-C20orf72 RAB28 chr4 13462323 - C20orf72 chr20 17968809 + Exonic hg19 BRCA TCGA-A2-A0T3-01A 4 5 Out-of-frame Inter-chr p15.33 70523 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB28-STAP1 RAB28 chr4 13462323 - STAP1 chr4 68456602 + Exonic hg19 HNSC TCGA-QK-A8Z8-01A 6 2 Out-of-frame Intra-chr p15.33 q13.2 Seq+ 70524 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB2A-STMN2 RAB2A chr8 61429812 - STMN2 chr8 80549037 + Exonic hg19 PAAD TCGA-3A-A9J0-01A 27 23 In-Frame Intra-chr q12.1 q21.13 Seq+ 70525 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB2A-TRAPPC9 RAB2A chr8 61429812 - TRAPPC9 chr8 141034176 - Exonic hg19 BRCA TCGA-AC-A6IW-01A 11 7 Out-of-frame Intra-chr q12.1 q24.3 Seq+ 70526 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB2B-AZIN1 RAB2B chr14 21936516 - AZIN1 chr8 103870378 - Exonic hg19 LIHC TCGA-ED-A82E-01A 6 4 CDS-5'UTR Inter-chr q11.2 q22.3 Seq+ 70527 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB30-AQP11 RAB30 chr11 82782733 - AQP11 chr11 77314601 + Exonic hg19 CESC TCGA-VS-A8EH-01A 27 17 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 70528 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB30-CCDC90B RAB30 chr11 82782733 - CCDC90B chr11 82977021 - Exonic hg19 LUSC TCGA-63-A5MW-01A 5 7 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 70529 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB30-DLG2 RAB30 chr11 82782733 - DLG2 chr11 83497835 - Exonic hg19 SKCM TCGA-D3-A8GB-06A 2 1 5'UTR-CDS Intra-chr q14.1 q14.1 70530 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB30-DPP3 RAB30 chr11 82782733 - DPP3 chr11 66272083 + Exonic hg19 BLCA TCGA-FD-A62S-01A 18 7 5'UTR-CDS Intra-chr q14.1 q13.2 Seq+ 70531 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB33B-NAA15 RAB33B chr4 140375598 - NAA15 chr4 140255328 + Exonic hg19 UCS TCGA-N8-A4PL-01A 5 3 In-Frame Intra-chr q31.1 q31.1 Seq+ 70532 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB35-GCN1L1 RAB35 chr12 120546221 - GCN1L1 chr12 120587847 - Exonic hg19 BLCA TCGA-XF-AAMT-01A 27 24 In-Frame Intra-chr q24.23 Seq+ 70533 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB38-CA10 RAB38 chr11 87908351 - CA10 chr17 50149753 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 24 18 In-Frame Inter-chr q14.2 q22 Seq+ 70534 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB39-TECTA RAB39 chr11 107799521 - TECTA chr11 121058541 + Exonic hg19 LUAD TCGA-86-8358-01A 6 3 Out-of-frame Intra-chr q23.3 70535 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB3B-MYSM1 RAB3B chr1 52398990 - MYSM1 chr1 59131303 - Exonic hg19 SARC TCGA-3B-A9HL-01A 4 2 Out-of-frame Intra-chr p32.3 p32.1 Transcription factor Seq+ 70536 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB3B-PKN2 RAB3B chr1 52442562 - PKN2 chr1 89206671 + Exonic hg19 SARC TCGA-DX-A23U-01A 25 19 In-Frame Intra-chr p32.3 p22.2 AGC:PKN Seq+ 70537 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB3D-TMEM205 RAB3D chr19 11450145 - TMEM205 chr19 11456304 - Exonic hg19 BRCA TCGA-BH-A18V-01A 17 35 5'UTR-5'UTR Intra-chr p13.2 p13.2 Seq+ 70538 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB3GAP1-ACMSD RAB3GAP1 chr2 135815656 - ACMSD chr2 135655911 + Exonic hg19 TGCT TCGA-2G-AAGA-01A 15 12 In-Frame Intra-chr q21.3 q21.3 Seq+ 70539 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB3GAP1-ACMSD RAB3GAP1 chr2 135851263 - ACMSD chr2 135655911 + Exonic hg19 BRCA TCGA-AR-A5QQ-01A 2 1 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 70540 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB3GAP1-ACMSD RAB3GAP1 chr2 135893502 - ACMSD chr2 135616831 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 10 6 In-Frame Intra-chr q21.3 q21.3 Seq+ 70541 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB3GAP1-ARHGAP15 RAB3GAP1 chr2 135893502 - ARHGAP15 chr2 143913046 + Exonic hg19 PRAD TCGA-M7-A724-01A 5 8 CDS-5'UTR Intra-chr q21.3 q22.2 Seq+ 70542 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB3GAP1-CCNT2 RAB3GAP1 chr2 135815656 - CCNT2 chr2 135694411 + Exonic hg19 LUSC TCGA-18-3419-01A 11 4 In-Frame Intra-chr q21.3 q21.3 Seq+ 70543 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB3GAP1-LRP1B RAB3GAP1 chr2 135851263 - LRP1B chr2 141739845 - Exonic hg19 KIRP TCGA-BQ-5878-01A 3 8 Out-of-frame Intra-chr q21.3 q22.2 Oncogene Tumor suppressor gene Seq+ 70544 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB3GAP1-MAP4K3 RAB3GAP1 chr2 135911446 - MAP4K3 chr2 39499683 - Exonic hg19 BRCA TCGA-E2-A10A-01A 7 1 In-Frame Intra-chr q21.3 p22.1 Seq+ 70545 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB3GAP2-DLGAP1 RAB3GAP2 chr1 220445565 - DLGAP1 chr18 3742512 - Exonic hg19 UCEC TCGA-AJ-A3NH-01A 2 1 Out-of-frame Inter-chr q41 p11.31 70546 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB3GAP2-NEK7 RAB3GAP2 chr1 220406141 - NEK7 chr1 198201683 + Exonic hg19 LUSC TCGA-94-8491-01A 3 1 CDS-5'UTR Intra-chr q41 q31.3 Other:NEK Seq+ 70547 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB3IL1-NRG1 RAB3IL1 chr11 61669914 - NRG1 chr8 32585467 + Exonic hg19 OV TCGA-04-1362-01A 17 5 Out-of-frame Inter-chr q12.3 p12 Seq+ 70548 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB3IP-AVIL RAB3IP chr12 70189124 - AVIL chr12 58208009 - Exonic hg19 SARC TCGA-IF-A3RQ-01A 5 4 In-Frame Intra-chr q15 q14.1 Seq+ 70549 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB3IP-BEST3 RAB3IP chr12 70150443 - BEST3 chr12 70078388 - Exonic hg19 SARC TCGA-DX-A6BF-01A 4 9 Out-of-frame Intra-chr q15 q15 Seq+ 70550 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB3IP-BEST3 RAB3IP chr12 70178595 - BEST3 chr12 70072673 - Exonic hg19 CHOL TCGA-W5-AA2X-01A 12 11 Out-of-frame Intra-chr q15 q15 Seq+ 70551 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB3IP-CCDC92 RAB3IP chr12 70150443 - CCDC92 chr12 124440991 - Exonic hg19 SARC TCGA-DX-A3LS-01A 11 1 Out-of-frame Intra-chr q15 70552 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB3IP-CD63 RAB3IP chr12 70132811 - CD63 chr12 56120045 - Exonic hg19 BLCA TCGA-4Z-AA7S-01A 1020 907 5'UTR-CDS Intra-chr q15 q13.2 Seq+ 70553 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB3IP-CTD-2021H9.3 RAB3IP chr12 70150443 - CTD-2021H9.3 chr12 71441459 - Exonic hg19 SARC TCGA-DX-A7EI-01A 16 12 Out-of-frame Intra-chr q15 70554 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB3IP-FRS2 RAB3IP chr12 70132811 - FRS2 chr12 69955960 + Exonic hg19 SARC TCGA-3R-A8YX-01A 64 49 5'UTR-5'UTR Intra-chr q15 q15 Seq+ 70555 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB3IP-FRS2 RAB3IP chr12 70150443 - FRS2 chr12 69924645 + Exonic hg19 BRCA TCGA-D8-A140-01A 3 2 5'UTR-5'UTR Intra-chr q15 q15 Seq+ 70556 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB3IP-GYS2 RAB3IP chr12 70132811 - GYS2 chr12 21733457 - Exonic hg19 LGG TCGA-TQ-A7RH-01A 10 8 5'UTR-CDS Intra-chr q15 p12.1 Seq+ 70557 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB3IP-KCNC2 RAB3IP chr12 70150443 - KCNC2 chr12 75445097 - Exonic hg19 SARC TCGA-DX-A1L3-01A 10 3 In-Frame Intra-chr q15 q21.1 70558 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB3IP-NUCB2 RAB3IP chr12 70132811 - NUCB2 chr11 17304336 + Exonic hg19 SARC TCGA-WK-A8XO-01A 9 9 5'UTR-5'UTR Inter-chr q15 p15.1 Seq+ 70559 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB3IP-NUP107 RAB3IP chr12 70150443 - NUP107 chr12 69125387 + Exonic hg19 BLCA TCGA-BT-A0S7-01A 361 173 Out-of-frame Intra-chr q15 q15 Seq+ 70560 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB3IP-OS9 RAB3IP chr12 70132811 - OS9 chr12 58109543 + Exonic hg19 BLCA TCGA-4Z-AA7S-01A 26 15 5'UTR-CDS Intra-chr q15 q13.3 Seq+ 70561 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB40B-YBX2 RAB40B chr17 80656331 - YBX2 chr17 7193854 - Exonic hg19 LIHC TCGA-ZS-A9CD-01A 6 4 Out-of-frame Intra-chr q25.3 p13.1 Transcription factor Seq+ 70562 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB40C-C16orf11 RAB40C chr16 668260 - C16orf11 chr16 613256 + Exonic hg19 ACC TCGA-OR-A5LO-01A 42 8 CDS-5'UTR Intra-chr p13.3 Seq+ 70563 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB40C-MYH11 RAB40C chr16 668260 - MYH11 chr16 15917268 - Exonic hg19 LUSC TCGA-77-8009-01A 3 5 In-Frame Intra-chr p13.3 Oncogene Seq+ 70564 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB40C-PTRH1 RAB40C chr16 668260 - PTRH1 chr9 130479238 - Exonic hg19 LGG TCGA-E1-A7Z2-01A 15 7 Out-of-frame Inter-chr p13.3 q34.11 Seq+ 70565 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB40C-RAB11FIP3 RAB40C chr16 640433 - RAB11FIP3 chr16 553004 + Exonic hg19 UCEC TCGA-EY-A4KR-01A 4 5 Out-of-frame Intra-chr p13.3 70566 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB40C-RAD51B RAB40C chr16 640433 - RAD51B chr14 68758601 + Exonic hg19 OV TCGA-04-1517-01A 11 2 Out-of-frame Inter-chr p13.3 q24.1 Seq+ 70567 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB4A-SNRPB RAB4A chr1 229407117 - SNRPB chr20 2448404 - Exonic hg19 BLCA TCGA-CU-A0YO-01A 10 13 Out-of-frame Inter-chr q42.13 p13 Seq+ 70568 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB4A-WDR47 RAB4A chr1 229424590 - WDR47 chr1 109533951 - Exonic hg19 PRAD TCGA-HC-7817-01B 21 15 In-Frame Intra-chr q42.13 p13.3 Seq+ 70569 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB4B-ADCK4 RAB4B chr19 41284296 - ADCK4 chr19 41201959 - Exonic hg19 LUSC TCGA-43-7657-01A 90 79 Out-of-frame Intra-chr q13.2 Atypical:ABC1 Seq+ 70570 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB4B-EXOC4 RAB4B chr19 41284296 - EXOC4 chr7 133041084 + Exonic hg19 GBM TCGA-19-0957-02A 2 8 In-Frame Inter-chr q13.2 q33 Seq+ 70571 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB4B-FBXL12 RAB4B chr19 41292883 - FBXL12 chr19 9922393 - Exonic hg19 PRAD TCGA-V1-A8WL-01A 2 1 3'UTR-CDS Intra-chr q13.2 p13.2 70572 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB5A-PLCL2 RAB5A chr3 19992553 - PLCL2 chr3 17051166 + Exonic hg19 SARC TCGA-DX-A1KY-01A 90 42 Out-of-frame Intra-chr p24.3 Seq+ 70573 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB5B-DGKA RAB5B chr12 56367923 - DGKA chr12 56330207 + Exonic hg19 UCS TCGA-N8-A4PP-01A 6 48 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 70574 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB6A-GDPD5 RAB6A chr11 73471611 - GDPD5 chr11 75201365 - Exonic hg19 LIHC TCGA-KR-A7K8-01A 4 8 CDS-5'UTR Intra-chr q13.4 q13.5 Seq+ 70575 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB6A-HIST1H2AC RAB6A chr11 73418465 - HIST1H2AC chr6 26138282 + Exonic hg19 STAD TCGA-BR-4361-01A 65 61 CDS-3'UTR Inter-chr q13.4 p22.2 Seq+ 70576 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB6A-MICA RAB6A chr11 73441810 - MICA chr6 31378320 + Exonic hg19 SARC TCGA-DX-A23Z-01A 6 9 Out-of-frame Inter-chr q13.4 p21.33 Seq+ 70577 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB6A-MRPL48 RAB6A chr11 73471611 - MRPL48 chr11 73516072 + Exonic hg19 BRCA TCGA-AN-A0AJ-01A 5 24 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 70578 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB6A-SHANK2 RAB6A chr11 73427296 - SHANK2 chr11 70544868 - Exonic hg19 BRCA TCGA-LD-A7W6-01A 2 2 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 70579 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB6A-TUT1 RAB6A chr11 73418465 - TUT1 chr11 62344763 - Exonic hg19 LIHC TCGA-DD-AADY-01A 3 1 Out-of-frame Intra-chr q13.4 q12.3 Seq+ 70580 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB7A-ANXA1 RAB7A chr3 128533639 - ANXA1 chr9 75772570 + Exonic hg19 CESC TCGA-EK-A2RO-01A 2 40 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q21.13 Tumor suppressor gene 70581 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB7A-CLCN3 RAB7A chr3 128533639 - CLCN3 chr4 170623929 + Exonic hg19 PRAD TCGA-CH-5794-01A 2 4 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q33 70582 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB7A-RABEP1 RAB7A chr3 128533639 - RABEP1 chr17 5283828 + Exonic hg19 LGG TCGA-HW-8322-01A 2 5 Out-of-frame Inter-chr q21.3 Tumor suppressor gene p13.2 70583 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB7A-WDR5 RAB7A chr3 128445202 - WDR5 chr9 137004942 + Exonic hg19 LIHC TCGA-DD-AAE2-01A 3 11 5'UTR-5'UTR Inter-chr q21.3 Tumor suppressor gene q34.2 Seq+ 70584 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB8A-PLVAP RAB8A chr19 16222835 - PLVAP chr19 17477004 - Exonic hg19 ACC TCGA-OR-A5K5-01A 29 17 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 70585 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB8B-ANKDD1A RAB8B chr15 63481947 - ANKDD1A chr15 65207996 + Exonic hg19 UCS TCGA-N5-A4RA-01A 3 1 In-Frame Intra-chr q22.2 q22.31 70586 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB8B-TLN2 RAB8B chr15 63481947 - TLN2 chr15 63030413 + Exonic hg19 LIHC TCGA-DD-A4NO-01A 3 6 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 70587 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB9A-EGFL6 RAB9A chrX 13707407 - EGFL6 chrX 13635849 + Exonic hg19 LUSC TCGA-33-6738-01A 16 16 5'UTR-CDS Intra-chr p22.2 p22.2 Seq+ 70588 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB9A-EGFL6 RAB9A chrX 13707407 - EGFL6 chrX 13607675 + Exonic hg19 PAAD TCGA-S4-A8RP-01A 26 14 5'UTR-CDS Intra-chr p22.2 p22.2 Seq+ 70589 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAB9A-TRAPPC2 RAB9A chrX 13722021 - TRAPPC2 chrX 13738101 - Exonic hg19 LUSC TCGA-63-A5MY-01A 3 33 5'UTR-5'UTR Intra-chr p22.2 p22.2 Seq+ 70590 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RABEP1-ASPA RABEP1 chr17 5185815 - ASPA chr17 3397644 + Exonic hg19 BRCA TCGA-A2-A25B-01A 8 10 In-Frame Intra-chr p13.2 p13.2 Seq+ 70591 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RABEP1-MINK1 RABEP1 chr17 5281527 - MINK1 chr17 4781612 + Exonic hg19 PRAD TCGA-KK-A8ID-01A 10 8 In-Frame Intra-chr p13.2 p13.2 Seq+ 70592 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RABEP1-NUP88 RABEP1 chr17 5185815 - NUP88 chr17 5308563 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 14 27 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 70593 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RABEP1-PIGL RABEP1 chr17 5257785 - PIGL chr17 16203202 + Exonic hg19 LUSC TCGA-60-2724-01A 5 4 Out-of-frame Intra-chr p13.2 p11.2 Seq+ 70594 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RABEP1-RNF167 RABEP1 chr17 5235447 - RNF167 chr17 4843782 + Exonic hg19 HNSC TCGA-UF-A71A-01A 27 13 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 70595 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RABEP1-RNF167 RABEP1 chr17 5235447 - RNF167 chr17 4843782 + Exonic hg19 HNSC TCGA-UF-A71A-06A 29 14 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 70596 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RABEP1-RORB RABEP1 chr17 5250220 - RORB chr9 77245198 + Exonic hg19 BRCA TCGA-A8-A07W-01A 9 17 In-Frame Inter-chr p13.2 q21.13 Transcription factor Seq+ 70597 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RABEP1-ZFP3 RABEP1 chr17 5235447 - ZFP3 chr17 4994792 + Exonic hg19 ESCA TCGA-JY-A6FH-01A 3 12 CDS-5'UTR Intra-chr p13.2 p13.2 Transcription factor Seq+ 70598 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RABGAP1-NIPSNAP3B RABGAP1 chr9 125761045 - NIPSNAP3B chr9 107535103 + Exonic hg19 PRAD TCGA-HC-7821-01A 27 38 Out-of-frame Intra-chr q33.2 q31.1 Seq+ 70599 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RABGAP1-PBX3 RABGAP1 chr9 125782738 - PBX3 chr9 128691934 + Exonic hg19 SKCM TCGA-EB-A82C-01A 3 1 In-Frame Intra-chr q33.2 q33.3 Transcription factor Seq+ 70600 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RABGAP1-RC3H2 RABGAP1 chr9 125719488 - RC3H2 chr9 125659855 - Exonic hg19 HNSC TCGA-F7-A61W-01A 5 6 CDS-5'UTR Intra-chr q33.2 q33.2 70601 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RABGAP1-TTLL11 RABGAP1 chr9 125782738 - TTLL11 chr9 124801647 - Exonic hg19 LUSC TCGA-90-A59Q-01A 15 7 In-Frame Intra-chr q33.2 q33.2 Seq+ 70602 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RABGAP1L-ACBD6 RABGAP1L chr1 174606626 - ACBD6 chr1 180366740 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 8 5 In-Frame Intra-chr q25.1 q25.3 Seq+ 70603 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RABGAP1L-DARS2 RABGAP1L chr1 174274265 - DARS2 chr1 173795825 + Exonic hg19 SKCM TCGA-EE-A2ML-06A 7 3 In-Frame Intra-chr q25.1 q25.1 Seq+ 70604 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RABGAP1L-KLHL20 RABGAP1L chr1 174128795 - KLHL20 chr1 173702852 + Exonic hg19 HNSC TCGA-CN-5361-01A 12 2 5'UTR-CDS Intra-chr q25.1 q25.1 70605 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RABGAP1L-KLHL20 RABGAP1L chr1 174274265 - KLHL20 chr1 173735285 + Exonic hg19 PRAD TCGA-M7-A725-01A 2 1 Out-of-frame Intra-chr q25.1 q25.1 70606 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RABGAP1L-LGR6 RABGAP1L chr1 174606626 - LGR6 chr1 202266636 + Exonic hg19 BRCA TCGA-A8-A08J-01A 3 1 Out-of-frame Intra-chr q25.1 q32.1 70607 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RABGGTB-FOXJ3 RABGGTB chr1 76251959 - FOXJ3 chr1 42647695 - Exonic hg19 LUSC TCGA-22-4601-01A 4 9 Out-of-frame Intra-chr p31.1 p34.2 Transcription factor Seq+ 70608 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAC3-ABCA8 RAC3 chr17 79989672 - ABCA8 chr17 66865920 - Exonic hg19 BRCA TCGA-AQ-A04H-01B 3 5 In-Frame Intra-chr q25.3 q24.2 Seq+ 70609 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RACGAP1-CERS5 RACGAP1 chr12 50419181 - CERS5 chr12 50537840 - Exonic hg19 HNSC TCGA-BB-7862-01A 10 6 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 70610 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RACGAP1-LIMA1 RACGAP1 chr12 50410414 - LIMA1 chr12 50594667 - Exonic hg19 STAD TCGA-CG-4438-01A 28 48 Out-of-frame Intra-chr q13.12 q13.12 Tumor suppressor gene Seq+ 70611 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD1-SPEF2 RAD1 chr5 34914800 - SPEF2 chr5 35691139 + Exonic hg19 SKCM TCGA-EB-A82C-01A 5 4 In-Frame Intra-chr p13.2 p13.2 Seq+ 70612 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD17-CNTN5 RAD17 chr5 68677884 - CNTN5 chr11 100226848 + Exonic hg19 LGG TCGA-TM-A84I-01A 14 13 In-Frame Inter-chr q22.1 Seq+ 70613 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD17-SEC24A RAD17 chr5 68670538 - SEC24A chr5 134050714 + Exonic hg19 PRAD TCGA-EJ-5524-01A 12 9 In-Frame Intra-chr q31.1 Seq+ 70614 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD18-CD86 RAD18 chr3 8940578 - CD86 chr3 121810448 + Exonic hg19 BRCA TCGA-D8-A1XQ-01A 2 2 In-Frame Intra-chr p25.3 q13.33 70615 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD50-C5orf56 RAD50 chr5 131895059 - C5orf56 chr5 131785342 + Exonic hg19 LIHC TCGA-BC-A10T-01A 28 38 CDS-5'UTR Intra-chr q31.1 Oncogene q31.1 Seq+ 70616 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD50-CADPS RAD50 chr5 131911620 - CADPS chr3 62578423 - Exonic hg19 LGG TCGA-DU-7014-01A 2 1 In-Frame Inter-chr q31.1 Oncogene p14.2 Seq+ 70617 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD50-SLC22A4 RAD50 chr5 131973915 - SLC22A4 chr5 131670411 + Exonic hg19 UCEC TCGA-SL-A6J9-01A 11 4 Out-of-frame Intra-chr q31.1 Oncogene q31.1 Seq+ 70618 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD50-TCOF1 RAD50 chr5 131895059 - TCOF1 chr5 149767465 + Exonic hg19 BRCA TCGA-A2-A0EP-01A 3 6 In-Frame Intra-chr q31.1 Oncogene q32 Seq+ 70619 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD51AP1-ATN1 RAD51AP1 chr12 4658002 - ATN1 chr12 7047008 + Exonic hg19 LUSC TCGA-85-8584-01A 5 3 Out-of-frame Intra-chr p13.32 p13.31 Seq+ 70620 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD51AP1-SLCO1C1 RAD51AP1 chr12 4653070 - SLCO1C1 chr12 20890041 + Exonic hg19 LUSC TCGA-37-3792-01A 92 52 In-Frame Intra-chr p13.32 p12.2 Seq+ 70621 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD51AP1-ST8SIA1 RAD51AP1 chr12 4648122 - ST8SIA1 chr12 22402032 - Exonic hg19 LGG TCGA-CS-4943-01A 61 47 In-Frame Intra-chr p13.32 p12.1 Seq+ 70622 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD51B-BAZ1A RAD51B chr14 68353921 - BAZ1A chr14 35228052 - Exonic hg19 ACC TCGA-OR-A5J9-01A 3 1 Out-of-frame Intra-chr q24.1 q13.2 Seq+ 70623 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD51B-DACT1 RAD51B chr14 68353921 - DACT1 chr14 59107454 + Exonic hg19 HNSC TCGA-CV-6934-01A 2 3 In-Frame Intra-chr q24.1 q23.1 Tumor suppressor gene 70624 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD51B-DCAF5 RAD51B chr14 68353921 - DCAF5 chr14 69589077 - Exonic hg19 BRCA TCGA-E9-A1N4-01A 2 2 Out-of-frame Intra-chr q24.1 q24.1 KB Seq+ 70625 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD51B-GPHN RAD51B chr14 68353921 - GPHN chr14 67626132 + Exonic hg19 LUSC TCGA-43-A474-01A 17 5 In-Frame Intra-chr q24.1 q23.3 Seq+ 70626 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD51B-GPHN RAD51B chr14 68353921 - GPHN chr14 67626132 + Exonic hg19 STAD TCGA-IP-7968-01A 10 30 In-Frame Intra-chr q24.1 q23.3 Seq+ 70627 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD51B-IFT43 RAD51B chr14 68758697 - IFT43 chr14 76488670 + Exonic hg19 SKCM TCGA-OD-A75X-06A 5 1 Out-of-frame Intra-chr q24.1 q24.3 70628 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD51B-MARK3 RAD51B chr14 68353921 - MARK3 chr14 103946724 + Exonic hg19 LUSC TCGA-77-A5G6-01A 11 9 In-Frame Intra-chr q24.1 q32.32 CAMK:CAMKL Seq+ 70629 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD51B-SMOC1 RAD51B chr14 68934967 - SMOC1 chr14 70459134 + Exonic hg19 BLCA TCGA-XF-AAMQ-01A 4 3 In-Frame Intra-chr q24.1 q24.2 Seq+ 70630 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD51B-UVRAG RAD51B chr14 68934967 - UVRAG chr11 75851755 + Exonic hg19 BRCA TCGA-AR-A24Q-01A 2 1 Out-of-frame Inter-chr q24.1 q13.5 Tumor suppressor gene Seq+ 70631 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD51D-SLCO6A1 RAD51D chr17 33433405 - SLCO6A1 chr5 101748847 - Exonic hg19 LUSC TCGA-66-2754-01A 7 6 Out-of-frame Inter-chr q12 q21.1 Seq+ 70632 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD52-RASSF8 RAD52 chr12 1098975 - RASSF8 chr12 26208169 + Exonic hg19 LIHC TCGA-CC-A3MA-01A 7 1 5'UTR-5'UTR Intra-chr p13.33 p12.1 Tumor suppressor gene 70633 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD52-RIMKLB RAD52 chr12 1058569 - RIMKLB chr12 8925917 + Exonic hg19 UCEC TCGA-B5-A5OE-01A 5 10 5'UTR-CDS Intra-chr p13.33 p13.31 Seq+ 70634 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD54B-MATN2 RAD54B chr8 95423349 - MATN2 chr8 98991114 + Exonic hg19 BRCA TCGA-A2-A0CW-01A 3 1 In-Frame Intra-chr q22.1 q22.1 70635 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD54L2-ERC2 RAD54L2 chr3 51575666 - ERC2 chr3 55545304 - Exonic hg19 BRCA TCGA-BH-A18U-01A 11 10 5'UTR-3'UTR Intra-chr p21.2 p14.3 Seq+ 70636 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD54L2-SLC25A26 RAD54L2 chr3 51669805 - SLC25A26 chr3 66312475 + Exonic hg19 COAD TCGA-AD-6899-01A 2 1 Out-of-frame Intra-chr p21.2 70637 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAD9A-CLPB RAD9A chr11 67159549 - CLPB chr11 72141407 - Exonic hg19 SKCM TCGA-EE-A2GR-06A 2 1 In-Frame Intra-chr q13.2 q13.4 Seq+ 70638 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAF1-C9orf153 RAF1 chr3 12632297 - C9orf153 chr9 88844544 - Exonic hg19 ESCA TCGA-L5-A4OS-01A 4 9 CDS-5'UTR Inter-chr p25.2 TKL:RAF Oncogene q21.33 Seq+ 70639 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAF1-GXYLT2 RAF1 chr3 12705312 - GXYLT2 chr3 72957518 + Exonic hg19 PRAD TCGA-EJ-5497-01A 4 8 5'UTR-CDS Intra-chr p25.2 TKL:RAF Oncogene p13 Seq+ 70640 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAF1-IQSEC1 RAF1 chr3 12705312 - IQSEC1 chr3 12983365 - Exonic hg19 BLCA TCGA-2F-A9KP-01A 11 7 5'UTR-CDS Intra-chr p25.2 TKL:RAF Oncogene p25.2 Seq+ 70641 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAF1-NXPH1 RAF1 chr3 12705312 - NXPH1 chr7 8790638 + Exonic hg19 BLCA TCGA-DK-A6B5-01A 32 21 5'UTR-CDS Inter-chr p25.2 TKL:RAF Oncogene p21.3 Seq+ 70642 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAF1-PHC3 RAF1 chr3 12641190 - PHC3 chr3 169815172 - Exonic hg19 PRAD TCGA-HC-8256-01A 14 9 In-Frame Intra-chr p25.2 TKL:RAF Oncogene q26.2 Tumor suppressor gene Seq+ 70643 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAF1-TMEM40 RAF1 chr3 12632297 - TMEM40 chr3 12791339 - Exonic hg19 KIRC TCGA-CJ-4635-01A 21 4 CDS-5'UTR Intra-chr p25.2 TKL:RAF Oncogene p25.2 Seq+ 70644 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAF1-TMEM40 RAF1 chr3 12632297 - TMEM40 chr3 12791339 - Exonic hg19 PAAD TCGA-IB-A5SS-01A 8 4 CDS-5'UTR Intra-chr p25.2 TKL:RAF Oncogene p25.2 Seq+ 70645 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAF1-TMEM40 RAF1 chr3 12705312 - TMEM40 chr3 12784006 - Exonic hg19 ACC TCGA-OR-A5J7-01A 70 39 5'UTR-CDS Intra-chr p25.2 TKL:RAF Oncogene p25.2 Seq+ 70646 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAF1-TMEM40 RAF1 chr3 12632297 - TMEM40 chr3 12791339 - Exonic hg19 TGCT TCGA-XE-AAO4-01A 9 1 CDS-5'UTR Intra-chr p25.2 TKL:RAF Oncogene p25.2 Seq+ 70647 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAF1-TRAK1 RAF1 chr3 12645635 - TRAK1 chr3 42236296 + Exonic hg19 SKCM TCGA-EE-A2MI-06A 65 37 In-Frame Intra-chr p25.2 TKL:RAF Oncogene p22.1 Seq+ 70648 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAF1-XPC RAF1 chr3 12705312 - XPC chr3 14189501 - Exonic hg19 LUAD TCGA-86-A456-01A 4 1 5'UTR-CDS Intra-chr p25.2 TKL:RAF Oncogene p25.1 Oncogene 70649 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAGE-CINP RAGE chr14 102771299 - CINP chr14 102825924 - Exonic hg19 LUAD TCGA-NJ-A55A-01A 2 1 Out-of-frame Intra-chr q32.31 70650 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAGE-MUCL1 RAGE chr14 102771299 - MUCL1 chr12 55248900 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 155 85 Out-of-frame Inter-chr q13.2 70651 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAGE-PRND RAGE chr14 102717149 - PRND chr20 4705187 + Exonic hg19 HNSC TCGA-CR-5243-01A 2 2 Out-of-frame Inter-chr p13 70652 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAI1-ATP5G1 RAI1 chr17 17627473 - ATP5G1 chr17 46971734 + Exonic hg19 THYM TCGA-ZB-A961-01A 8 10 5'UTR-CDS Intra-chr p11.2 q21.32 Seq+ 70653 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAI1-C5orf25 RAI1 chr17 17627473 - C5orf25 chr5 175763723 + Exonic hg19 SKCM TCGA-XV-AAZY-01A 68 36 5'UTR-CDS Inter-chr p11.2 70654 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAI1-IFT20 RAI1 chr17 17627473 - IFT20 chr17 26659013 - Exonic hg19 LUSC TCGA-33-4533-01A 201 70 5'UTR-5'UTR Intra-chr p11.2 q11.2 Seq+ 70655 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAI1-IGF2BP1 RAI1 chr17 17627473 - IGF2BP1 chr17 47076471 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 56 53 5'UTR-CDS Intra-chr p11.2 q21.32 Seq+ 70656 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAI1-LRRC4C RAI1 chr17 17707163 - LRRC4C chr11 40669828 - Exonic hg19 HNSC TCGA-P3-A6T6-01A 2 1 CDS-5'UTR Inter-chr p11.2 p12 70657 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAI1-MAN1A2 RAI1 chr17 17585107 - MAN1A2 chr1 117944808 + Exonic hg19 LIHC TCGA-CC-5260-01A 5 9 5'UTR-CDS Inter-chr p11.2 p12 Seq+ 70658 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAI1-MRGPRF RAI1 chr17 17585107 - MRGPRF chr11 68773729 - Exonic hg19 LUAD TCGA-93-8067-01A 2 11 5'UTR-CDS Inter-chr p11.2 q13.3 Seq+ 70659 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAI1-NOS2 RAI1 chr17 17627473 - NOS2 chr17 26094863 - Exonic hg19 SKCM TCGA-EE-A17Y-06A 2 1 5'UTR-CDS Intra-chr p11.2 q11.2 Seq+ 70660 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAI1-PEMT RAI1 chr17 17627473 - PEMT chr17 17480341 - Exonic hg19 HNSC TCGA-BA-6869-01A 16 10 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 70661 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAI1-PEX1 RAI1 chr17 17707163 - PEX1 chr7 92147569 - Exonic hg19 PRAD TCGA-HC-A8CY-01A 22 3 Out-of-frame Inter-chr p11.2 q21.2 Seq+ 70662 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAI1-SPNS2 RAI1 chr17 17707163 - SPNS2 chr17 4428352 + Exonic hg19 BRCA TCGA-AC-A8OQ-01A 17 12 In-Frame Intra-chr p11.2 p13.2 Seq+ 70663 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAI14-ASB4 RAI14 chr5 34687060 - ASB4 chr7 95157125 + Exonic hg19 LUAD TCGA-73-4666-01A 80 49 Out-of-frame Inter-chr p13.2 q21.3 Seq+ 70664 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAI14-C5orf34 RAI14 chr5 34687060 - C5orf34 chr5 43494703 - Exonic hg19 SKCM TCGA-GN-A8LN-01A 4 1 In-Frame Intra-chr p13.2 p12 70665 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAI14-MAPK9 RAI14 chr5 34757703 - MAPK9 chr5 179696409 - Exonic hg19 SKCM TCGA-D3-A1Q3-06A 49 28 In-Frame Intra-chr p13.2 q35.3 Tumor suppressor gene Seq+ 70666 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAI14-SCP2 RAI14 chr5 34656580 - SCP2 chr1 53440441 + Exonic hg19 LIHC TCGA-PD-A5DF-01A 10 13 5'UTR-CDS Inter-chr p13.2 p32.3 Seq+ 70667 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAI2-PPP2R1B RAI2 chrX 17878629 - PPP2R1B chr11 111626174 - Exonic hg19 PRAD TCGA-G9-6361-01A 4 2 3'UTR-CDS Inter-chr p22.13 q23.1 Tumor suppressor gene Seq+ 70668 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALA-C7orf10 RALA chr7 39663424 - C7orf10 chr7 40789033 + Exonic hg19 LUSC TCGA-85-8354-01A 33 17 5'UTR-CDS Intra-chr p14.1 Seq+ 70669 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALA-C7orf36 RALA chr7 39663424 - C7orf36 chr7 39610105 + Exonic hg19 UCS TCGA-NG-A4VU-01A 17 6 Out-of-frame Intra-chr p14.1 70670 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALA-CAMK2B RALA chr7 39663424 - CAMK2B chr7 44260500 - Exonic hg19 BLCA TCGA-ZF-AA5H-01A 170 138 5'UTR-5'UTR Intra-chr p14.1 p13 Seq+ 70671 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALBP1-TWSG1 RALBP1 chr18 9475174 - TWSG1 chr18 9337191 + Exonic hg19 BRCA TCGA-D8-A27H-01A 70 78 5'UTR-5'UTR Intra-chr p11.22 p11.22 Seq+ 70672 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALGAPA1-SLC25A21 RALGAPA1 chr14 36277936 - SLC25A21 chr14 37344209 - Exonic hg19 PRAD TCGA-HC-A8D0-01A 2 2 In-Frame Intra-chr q13.2 q13.3 Seq+ 70673 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALGAPA2-ACSM1 RALGAPA2 chr20 20610007 - ACSM1 chr16 20696725 - Exonic hg19 LIHC TCGA-BC-A10T-01A 7 8 In-Frame Inter-chr p11.23 p12.3 Seq+ 70674 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALGAPA2-BSCL2 RALGAPA2 chr20 20610007 - BSCL2 chr11 62462183 - Exonic hg19 PCPG TCGA-WB-A81D-01A 87 42 In-Frame Inter-chr p11.23 q12.3 Seq+ 70675 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALGAPA2-BTBD3 RALGAPA2 chr20 20656880 - BTBD3 chr20 11898982 + Exonic hg19 READ TCGA-EI-6514-01A 6 2 CDS-5'UTR Intra-chr p11.23 p12.2 Seq+ 70676 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALGAPA2-C20orf194 RALGAPA2 chr20 20634174 - C20orf194 chr20 3251208 - Exonic hg19 BLCA TCGA-XF-A8HG-01A 55 27 In-Frame Intra-chr p11.23 p13 Seq+ 70677 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALGAPA2-ZNFX1 RALGAPA2 chr20 20693018 - ZNFX1 chr20 47855837 - Exonic hg19 ACC TCGA-OR-A5JJ-01A 2 2 CDS-3'UTR Intra-chr p11.23 q13.13 70678 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALGAPB-C20orf152 RALGAPB chr20 37101712 - C20orf152 chr20 34618279 + Exonic hg19 BRCA TCGA-LL-A441-01A 3 15 5'UTR-CDS Intra-chr q11.23 Seq+ 70679 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALGAPB-CBFA2T2 RALGAPB chr20 37128276 - CBFA2T2 chr20 32194762 + Exonic hg19 CESC TCGA-C5-A1BE-01B 4 1 Out-of-frame Intra-chr q11.23 q11.21 70680 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALGAPB-CTCFL RALGAPB chr20 37168601 - CTCFL chr20 56094433 - Exonic hg19 LUSC TCGA-85-8664-01A 13 12 Out-of-frame Intra-chr q11.23 q13.31 Tumor suppressor gene Transcription factor Seq+ 70681 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALGAPB-CTNNBL1 RALGAPB chr20 37150341 - CTNNBL1 chr20 36405747 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 2 2 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 70682 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALGAPB-CTNNBL1 RALGAPB chr20 37169835 - CTNNBL1 chr20 36488301 + Exonic hg19 ESCA TCGA-R6-A6Y0-01B 4 24 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 70683 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALGAPB-DSN1 RALGAPB chr20 37121775 - DSN1 chr20 35390951 - Exonic hg19 SKCM TCGA-FS-A1ZE-06A 119 54 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 70684 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALGAPB-EPB41L1 RALGAPB chr20 37146643 - EPB41L1 chr20 34761686 + Exonic hg19 BRCA TCGA-A8-A08J-01A 5 4 CDS-5'UTR Intra-chr q11.23 q11.23 Seq+ 70685 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALGAPB-ITCH RALGAPB chr20 37199490 - ITCH chr20 33000321 + Exonic hg19 COAD TCGA-A6-2675-01A 2 2 In-Frame Intra-chr q11.23 q11.22 Seq+ 70686 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALGAPB-KCNB1 RALGAPB chr20 37128276 - KCNB1 chr20 47991529 - Exonic hg19 ESCA TCGA-VR-A8EQ-01A 5 95 Out-of-frame Intra-chr q11.23 q13.13 Seq+ 70687 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALGAPB-RPRD1B RALGAPB chr20 37137851 - RPRD1B chr20 36694483 + Exonic hg19 BRCA TCGA-BH-A1FC-01A 9 5 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 70688 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALGAPB-TMC2 RALGAPB chr20 37191340 - TMC2 chr20 2539102 + Exonic hg19 LUAD TCGA-L9-A7SV-01A 2 1 In-Frame Intra-chr q11.23 p13 70689 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALGPS1-FAM125B RALGPS1 chr9 129831635 - FAM125B chr9 129265456 + Exonic hg19 BRCA TCGA-C8-A12L-01A 4 4 Out-of-frame Intra-chr q33.3 70690 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALGPS1-LMX1B RALGPS1 chr9 129728230 - LMX1B chr9 129453115 + Exonic hg19 LUSC TCGA-L3-A524-01A 8 3 Out-of-frame Intra-chr q33.3 q33.3 Transcription factor Seq+ 70691 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALGPS1-NUP210L RALGPS1 chr9 129677291 - NUP210L chr1 153967656 - Exonic hg19 SARC TCGA-K1-A6RT-01A 3 5 5'UTR-CDS Inter-chr q33.3 q21.3 Seq+ 70692 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALGPS1-TYRP1 RALGPS1 chr9 129728230 - TYRP1 chr9 12693912 + Exonic hg19 BRCA TCGA-A2-A0D0-01A 6 7 CDS-5'UTR Intra-chr q33.3 p23 Seq+ 70693 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALGPS2-RASAL2 RALGPS2 chr1 178790839 - RASAL2 chr1 178359235 + Exonic hg19 PRAD TCGA-ZG-A9KY-01A 3 3 Out-of-frame Intra-chr q25.2 q25.2 Tumor suppressor gene Seq+ 70694 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALY-ATRN RALY chr20 32619410 - ATRN chr20 3515900 + Exonic hg19 SARC TCGA-SI-A71O-01A 8 5 5'UTR-CDS Intra-chr q11.22 p13 Seq+ 70695 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALY-CHMP4B RALY chr20 32619410 - CHMP4B chr20 32436273 + Exonic hg19 STAD TCGA-VQ-A8PH-01A 8 136 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 70696 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALY-DEFB123 RALY chr20 32581937 - DEFB123 chr20 30037832 + Exonic hg19 LUAD TCGA-78-8660-01A 14 7 5'UTR-CDS Intra-chr q11.22 q11.21 Seq+ 70697 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALY-EDEM2 RALY chr20 32581937 - EDEM2 chr20 33805864 - Exonic hg19 COAD TCGA-A6-2675-01A 8 5 Out-of-frame Intra-chr q11.22 q11.22 70698 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALY-PAK7 RALY chr20 32619410 - PAK7 chr20 9538381 - Exonic hg19 SKCM TCGA-ER-A3ET-06A 34 22 5'UTR-CDS Intra-chr q11.22 Seq+ 70699 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALY-PXMP4 RALY chr20 32581937 - PXMP4 chr20 32302542 - Exonic hg19 HNSC TCGA-QK-A6IJ-01A 14 13 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 70700 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALY-SLC24A3 RALY chr20 32581937 - SLC24A3 chr20 19560644 + Exonic hg19 CESC TCGA-UC-A7PF-01A 7 1 5'UTR-CDS Intra-chr q11.22 p11.23 Seq+ 70701 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RALY-TTI1 RALY chr20 32619410 - TTI1 chr20 36634799 - Exonic hg19 BLCA TCGA-2F-A9KT-01A 22 10 5'UTR-CDS Intra-chr q11.22 q11.23 Seq+ 70702 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAMP1-RBM44 RAMP1 chr2 238768370 - RBM44 chr2 238722235 + Exonic hg19 BRCA TCGA-A7-A26G-01A 2 1 CDS-5'UTR Intra-chr q37.3 q37.3 Seq+ 70703 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAMP1-RBM44 RAMP1 chr2 238768370 - RBM44 chr2 238722235 + Exonic hg19 COAD TCGA-NH-A5IV-01A 20 7 CDS-5'UTR Intra-chr q37.3 q37.3 Seq+ 70704 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RANBP10-LCAT RANBP10 chr16 67771916 - LCAT chr16 67974381 - Exonic hg19 LIHC TCGA-DD-AAE2-01A 52 29 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 70705 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RANBP10-RRP15 RANBP10 chr16 67839331 - RRP15 chr1 218504290 + Exonic hg19 BRCA TCGA-E2-A109-01A 185 152 Out-of-frame Inter-chr q22.1 q41 Seq+ 70706 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RANBP10-SLC12A4 RANBP10 chr16 67805937 - SLC12A4 chr16 67988676 - Exonic hg19 BLCA TCGA-BT-A20W-01A 5 2 In-Frame Intra-chr q22.1 q22.1 Seq+ 70707 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RANBP10-SLC12A4 RANBP10 chr16 67778191 - SLC12A4 chr16 67986328 - Exonic hg19 LUAD TCGA-MP-A4T4-01A 3 1 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 70708 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RANBP10-SLC7A6 RANBP10 chr16 67839331 - SLC7A6 chr16 68328608 + Exonic hg19 LUAD TCGA-MP-A4TF-01A 2 1 In-Frame Intra-chr q22.1 q22.1 70709 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RANBP17-CCDC99 RANBP17 chr5 170308900 - CCDC99 chr5 169015398 + Exonic hg19 BRCA TCGA-AR-A24Q-01A 19 10 CDS-5'UTR Intra-chr q35.1 70710 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RANBP17-GABRP RANBP17 chr5 170308900 - GABRP chr5 170238960 + Exonic hg19 LUAD TCGA-NJ-A4YF-01A 5 3 Out-of-frame Intra-chr q35.1 q35.1 Seq+ 70711 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RANBP2-BMP5 RANBP2 chr2 109371715 - BMP5 chr6 55659225 - Exonic hg19 BRCA TCGA-C8-A12U-01A 7 4 Out-of-frame Inter-chr q13 p12.1 Seq+ 70712 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RANBP3-KLK2 RANBP3 chr19 5978072 - KLK2 chr19 51379728 + Exonic hg19 PRAD TCGA-ZG-A9L5-01A 2 5 Out-of-frame Intra-chr p13.3 q13.33 Seq+ 70713 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RANBP3-MLLT1 RANBP3 chr19 5924838 - MLLT1 chr19 6270770 - Exonic hg19 PRAD TCGA-HC-8265-01A 12 4 In-Frame Intra-chr p13.3 p13.3 Seq+ 70714 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RANBP3-N6AMT2 RANBP3 chr19 5951404 - N6AMT2 chr13 21311944 - Exonic hg19 BRCA TCGA-MS-A51U-01A 40 20 In-Frame Inter-chr p13.3 Seq+ 70715 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RANBP3-PIP5K1C RANBP3 chr19 5978072 - PIP5K1C chr19 3667351 - Exonic hg19 BRCA TCGA-AQ-A04L-01B 3 4 In-Frame Intra-chr p13.3 p13.3 Seq+ 70716 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RANBP3-RFX2 RANBP3 chr19 5978072 - RFX2 chr19 6016282 - Exonic hg19 LUAD TCGA-78-7220-01A 2 2 Out-of-frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 70717 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RANBP9-ATXN1 RANBP9 chr6 13697017 - ATXN1 chr6 16328701 - Exonic hg19 LGG TCGA-HT-7604-01A 8 2 CDS-5'UTR Intra-chr p23 Tumor suppressor gene p22.3 70718 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RANBP9-MUTED RANBP9 chr6 13697017 - MUTED chr6 8016061 - Exonic hg19 LGG TCGA-HT-7604-01A 21 6 In-Frame Intra-chr p23 Tumor suppressor gene 70719 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RANBP9-TPMT RANBP9 chr6 13711167 - TPMT chr6 18149402 - Exonic hg19 BRCA TCGA-C8-A12U-01A 4 1 CDS-5'UTR Intra-chr p23 Tumor suppressor gene p22.3 Seq+ 70720 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RANBP9-TXNDC5 RANBP9 chr6 13697017 - TXNDC5 chr6 7904956 - Exonic hg19 LGG TCGA-HT-7604-01A 2 4 In-Frame Intra-chr p23 Tumor suppressor gene p24.3 Seq+ 70721 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RANGAP1-POLR3H RANGAP1 chr22 41680905 - POLR3H chr22 41928749 - Exonic hg19 ESCA TCGA-L5-A8NF-01A 2 4 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 70722 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAP1A-ABCD3 RAP1A chr1 112162556 - ABCD3 chr1 94924163 + Exonic hg19 STAD TCGA-CD-8532-01A 2 13 5'UTR-CDS Intra-chr p13.2 Tumor suppressor gene p21.3 Seq+ 70723 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAP1A-C1orf162 RAP1A chr1 112162969 - C1orf162 chr1 112018640 + Exonic hg19 LIHC TCGA-DD-A11C-01A 7 1 5'UTR-5'UTR Intra-chr p13.2 Tumor suppressor gene p13.2 Seq+ 70724 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAP1A-CD2 RAP1A chr1 112162556 - CD2 chr1 117297253 + Exonic hg19 HNSC TCGA-HD-7831-01A 6 5 5'UTR-CDS Intra-chr p13.2 Tumor suppressor gene p13.1 70725 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAP1B-CPM RAP1B chr12 69004823 - CPM chr12 69326620 - Exonic hg19 GBM TCGA-06-0686-01A 16 83 5'UTR-5'UTR Intra-chr q15 q15 Seq+ 70726 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAP1B-CSAD RAP1B chr12 69004832 - CSAD chr12 53555173 - Exonic hg19 STAD TCGA-FP-8631-01A 2 6 5'UTR-CDS Intra-chr q15 q13.13 Seq+ 70727 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAP1B-CTDSP2 RAP1B chr12 69004823 - CTDSP2 chr12 58223379 - Exonic hg19 GBM TCGA-26-5135-01A 3 22 5'UTR-CDS Intra-chr q15 q14.1 Seq+ 70728 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAP1B-DPT RAP1B chr12 69004823 - DPT chr1 168683584 - Exonic hg19 SARC TCGA-DX-A1KU-01A 127 172 5'UTR-CDS Inter-chr q15 q24.2 Seq+ 70729 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAP1B-GLIPR1L1 RAP1B chr12 69004823 - GLIPR1L1 chr12 75737473 + Exonic hg19 BRCA TCGA-A2-A0ES-01A 2 6 5'UTR-CDS Intra-chr q15 q21.2 Seq+ 70730 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAP1B-SCYL2 RAP1B chr12 69004823 - SCYL2 chr12 100711581 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 73 45 5'UTR-CDS Intra-chr q15 q23.1 Other:SCY1 Seq+ 70731 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAP1B-SNUPN RAP1B chr12 69004823 - SNUPN chr15 75899654 - Exonic hg19 SKCM TCGA-ER-A197-06A 29 37 5'UTR-CDS Inter-chr q15 q24.2 Seq+ 70732 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAP1GAP-CELA3B RAP1GAP chr1 21943799 - CELA3B chr1 22304862 + Exonic hg19 BRCA TCGA-A7-A26F-01A 2 2 Out-of-frame Intra-chr p36.12 Tumor suppressor gene p36.12 70733 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAP1GAP-GOLGB1 RAP1GAP chr1 21922708 - GOLGB1 chr3 121418732 - Exonic hg19 PRAD TCGA-HC-7748-01A 2 2 3'UTR-CDS Inter-chr p36.12 Tumor suppressor gene q13.33 70734 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAP1GAP-NIT2 RAP1GAP chr1 21936068 - NIT2 chr3 100073616 + Exonic hg19 BRCA TCGA-AC-A6IW-01A 19 23 Out-of-frame Inter-chr p36.12 Tumor suppressor gene q12.2 Tumor suppressor gene Seq+ 70735 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAP1GAP-NSDHL RAP1GAP chr1 21976254 - NSDHL chrX 152027314 + Exonic hg19 LGG TCGA-KT-A7W1-01A 10 6 Out-of-frame Inter-chr p36.12 Tumor suppressor gene q28 Seq+ 70736 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAP1GAP-USP48 RAP1GAP chr1 21976254 - USP48 chr1 22007327 - Exonic hg19 BRCA TCGA-LL-A6FQ-01A 5 10 Out-of-frame Intra-chr p36.12 Tumor suppressor gene p36.12 Seq+ 70737 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAP1GAP-USP48 RAP1GAP chr1 21976254 - USP48 chr1 22021714 - Exonic hg19 UCS TCGA-N9-A4Q3-01A 2 4 Out-of-frame Intra-chr p36.12 Tumor suppressor gene p36.12 Seq+ 70738 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAP1GDS1-ASTN2 RAP1GDS1 chr4 99342545 - ASTN2 chr9 119414072 - Exonic hg19 PRAD TCGA-G9-6361-01A 4 3 Out-of-frame Inter-chr q23 q33.1 Seq+ 70739 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAP1GDS1-GSTCD RAP1GDS1 chr4 99273752 - GSTCD chr4 106766598 + Exonic hg19 HNSC TCGA-CR-7388-01A 7 4 In-Frame Intra-chr q23 q24 Seq+ 70740 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAP1GDS1-SCD5 RAP1GDS1 chr4 99325753 - SCD5 chr4 83557976 - Exonic hg19 PRAD TCGA-HC-7212-01A 5 5 Out-of-frame Intra-chr q23 q21.22 Seq+ 70741 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAPGEF1-MCU RAPGEF1 chr9 134615157 - MCU chr10 74594117 + Exonic hg19 LUSC TCGA-58-8386-01A 4 7 5'UTR-CDS Inter-chr q34.13 q22.1 Seq+ 70742 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAPGEF1-MED27 RAPGEF1 chr9 134497183 - MED27 chr9 134769379 - Exonic hg19 HNSC TCGA-CV-A45W-01A 2 2 In-Frame Intra-chr q34.13 q34.13 Seq+ 70743 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAPGEF1-MED27 RAPGEF1 chr9 134471685 - MED27 chr9 134759486 - Exonic hg19 UCS TCGA-NA-A4R1-01A 46 10 Out-of-frame Intra-chr q34.13 q34.13 Seq+ 70744 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAPGEF1-REXO4 RAPGEF1 chr9 134615157 - REXO4 chr9 136278041 - Exonic hg19 SARC TCGA-DX-AB2E-01A 2 7 5'UTR-CDS Intra-chr q34.13 Transcription factor Seq+ 70745 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAPGEF1-TTF1 RAPGEF1 chr9 134514022 - TTF1 chr9 135251555 - Exonic hg19 LUAD TCGA-4B-A93V-01A 29 35 Out-of-frame Intra-chr q34.13 q34.13 Tumor suppressor gene Transcription factor Seq+ 70746 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAPGEF1-WDR83 RAPGEF1 chr9 134615157 - WDR83 chr19 12783661 + Exonic hg19 STAD TCGA-BR-7716-01A 3 93 5'UTR-5'UTR Inter-chr q34.13 p13.13 Seq+ 70747 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAPGEF1-ZMYND19 RAPGEF1 chr9 134585007 - ZMYND19 chr9 140483170 - Exonic hg19 SKCM TCGA-WE-A8ZR-06A 3 1 Out-of-frame Intra-chr q34.13 q34.3 70748 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAPGEF2-C4orf45 RAPGEF2 chr4 160268150 - C4orf45 chr4 159814869 - Exonic hg19 PRAD TCGA-G9-6373-01A 3 3 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 70749 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAPGEF2-OCIAD2 RAPGEF2 chr4 160235920 - OCIAD2 chr4 48906628 - Exonic hg19 BLCA TCGA-FD-A3SR-01A 81 55 CDS-5'UTR Intra-chr q32.1 p11 Seq+ 70750 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAPGEF2-RAB3IP RAPGEF2 chr4 160114408 - RAB3IP chr12 70188217 + Exonic hg19 PRAD TCGA-ZG-A8QW-01A 8 3 5'UTR-5'UTR Inter-chr q32.1 q15 Seq+ 70751 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAPGEF5-BAALC RAPGEF5 chr7 22306583 - BAALC chr8 104225147 + Exonic hg19 SARC TCGA-DX-A3M1-01A 5 1 In-Frame Inter-chr p15.3 q22.3 70752 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAPGEF5-CFDP1 RAPGEF5 chr7 22232985 - CFDP1 chr16 75339080 - Exonic hg19 LUAD TCGA-44-5645-01A 9 4 Out-of-frame Inter-chr p15.3 q23.1 Seq+ 70753 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAPGEF5-ISPD RAPGEF5 chr7 22186515 - ISPD chr7 16415866 - Exonic hg19 SKCM TCGA-EE-A2M7-06A 2 1 In-Frame Intra-chr p15.3 p21.2 70754 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAPGEF5-PPAPDC1A RAPGEF5 chr7 22270465 - PPAPDC1A chr10 122334643 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 89 124 Out-of-frame Inter-chr p15.3 Seq+ 70755 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAPGEF5-STEAP1B RAPGEF5 chr7 22330794 - STEAP1B chr7 22459455 - Exonic hg19 UCEC TCGA-AX-A2H4-01A 20 32 In-Frame Intra-chr p15.3 p15.3 Seq+ 70756 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAPGEF5-STEAP1B RAPGEF5 chr7 22270465 - STEAP1B chr7 22459455 - Exonic hg19 SKCM TCGA-D3-A2JN-06A 39 32 In-Frame Intra-chr p15.3 p15.3 Seq+ 70757 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAPGEF5-STEAP1B RAPGEF5 chr7 22232985 - STEAP1B chr7 22459455 - Exonic hg19 BRCA TCGA-JL-A3YW-01A 29 13 Out-of-frame Intra-chr p15.3 p15.3 Seq+ 70758 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAPGEF5-TMEM8C RAPGEF5 chr7 22396449 - TMEM8C chr9 136385410 - Exonic hg19 LUAD TCGA-44-3918-01A 3 2 5'UTR-CDS Inter-chr p15.3 q34.2 Seq+ 70759 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAPGEFL1-CDK12 RAPGEFL1 chr17 38334633 - CDK12 chr17 37686884 + Exonic hg19 BLCA TCGA-G2-AA3B-01A 2 2 5'UTR-CDS Intra-chr q21.1 q12 Oncogene 70760 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAPGEFL1-MAPT RAPGEFL1 chr17 38340601 - MAPT chr17 44101322 + Exonic hg19 BRCA TCGA-A8-A07B-01A 3 4 In-Frame Intra-chr q21.1 70761 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-C17orf108 RARA chr17 38487648 - C17orf108 chr17 26209738 - Exonic hg19 STAD TCGA-RD-A7BT-01A 92 632 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor Seq+ 70762 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-CA10 RARA chr17 38474700 - CA10 chr17 50149753 - Exonic hg19 BRCA TCGA-A8-A0A7-01A 105 96 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 70763 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-CDC6 RARA chr17 38465538 - CDC6 chr17 38457080 + Exonic hg19 LUAD TCGA-95-7948-01A 27 30 5'UTR-3'UTR Intra-chr q21.2 Oncogene Transcription factor q21.2 Seq+ 70764 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-CDK12 RARA chr17 38504716 - CDK12 chr17 37686857 + Exonic hg19 OV TCGA-3P-A9WA-01A 5 76 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q12 Oncogene Seq+ 70765 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-CDK12 RARA chr17 38474700 - CDK12 chr17 37646810 + Exonic hg19 BRCA TCGA-A2-A04W-01A 19 17 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q12 Oncogene Seq+ 70766 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-CERS4 RARA chr17 38474700 - CERS4 chr19 8315960 + Exonic hg19 UCEC TCGA-2E-A9G8-01A 74 45 5'UTR-5'UTR Inter-chr q21.2 Oncogene Transcription factor p13.2 Seq+ 70767 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-COL10A1 RARA chr17 38487648 - COL10A1 chr6 116446670 - Exonic hg19 BRCA TCGA-EW-A6S9-01A 25 28 5'UTR-5'UTR Inter-chr q21.2 Oncogene Transcription factor q22.1 Seq+ 70768 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-HOXB3 RARA chr17 38508759 - HOXB3 chr17 46632980 - Exonic hg19 BRCA TCGA-AO-A12D-01A 15 6 CDS-5'UTR Intra-chr q21.2 Oncogene Transcription factor q21.32 Transcription factor Seq+ 70769 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-LGALS16 RARA chr17 38465538 - LGALS16 chr19 40148523 + Exonic hg19 BRCA TCGA-C8-A8HP-01A 12 4 5'UTR-CDS Inter-chr q21.2 Oncogene Transcription factor q13.2 Seq+ 70770 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-LTBP1 RARA chr17 38474700 - LTBP1 chr2 33447147 + Exonic hg19 UCEC TCGA-AJ-A3QS-01A 2 3 5'UTR-CDS Inter-chr q21.2 Oncogene Transcription factor p22.3 Seq+ 70771 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-MSL1 RARA chr17 38487648 - MSL1 chr17 38282436 + Exonic hg19 BRCA TCGA-AR-A254-01A 145 62 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor q21.1 Seq+ 70772 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-MYO1D RARA chr17 38487648 - MYO1D chr17 31107802 - Exonic hg19 BRCA TCGA-A8-A09I-01A 100 48 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q11.2 Seq+ 70773 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-PCTP RARA chr17 38474700 - PCTP chr17 53848467 + Exonic hg19 BRCA TCGA-A2-A0D4-01A 68 31 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 70774 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-PCTP RARA chr17 38474700 - PCTP chr17 53848467 + Exonic hg19 BRCA TCGA-AN-A0FV-01A 2277 1542 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 70775 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-PGAP3 RARA chr17 38474700 - PGAP3 chr17 37830932 - Exonic hg19 BRCA TCGA-A8-A08B-01A 9 5 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q12 Oncogene Seq+ 70776 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-PML RARA chr17 38487648 - PML chr15 74317198 + Exonic hg19 LAML TCGA-AB-2823-03A 34 15 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 70777 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-PML RARA chr17 38487648 - PML chr15 74317198 + Exonic hg19 LAML TCGA-AB-2840-03A 11 31 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 70778 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-PML RARA chr17 38487648 - PML chr15 74326819 + Exonic hg19 LAML TCGA-AB-2841-03B 21 30 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 70779 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-PML RARA chr17 38487648 - PML chr15 74326819 + Exonic hg19 LAML TCGA-AB-2872-03A 5 2 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 70780 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-PML RARA chr17 38487648 - PML chr15 74317198 + Exonic hg19 LAML TCGA-AB-2980-03A 8 8 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 70781 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-PML RARA chr17 38487648 - PML chr15 74317198 + Exonic hg19 LAML TCGA-AB-2991-03A 20 1 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 70782 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-PML RARA chr17 38487648 - PML chr15 74326819 + Exonic hg19 LAML TCGA-AB-2994-03A 87 50 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 70783 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-PML RARA chr17 38487648 - PML chr15 74325497 + Exonic hg19 LAML TCGA-AB-2998-03A 20 9 Out-of-frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 70784 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-PML RARA chr17 38487648 - PML chr15 74317198 + Exonic hg19 LAML TCGA-AB-3001-03A 10 8 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 70785 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-PML RARA chr17 38487648 - PML chr15 74317198 + Exonic hg19 LAML TCGA-AB-3007-03A 13 9 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 70786 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-PML RARA chr17 38499119 - PML chr15 74326819 + Exonic hg19 LAML TCGA-AB-3012-03A 19 7 In-Frame Inter-chr q21.2 Oncogene Transcription factor q24.1 Oncogene Tumor suppressor gene KB Seq+ 70787 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-PRR11 RARA chr17 38474700 - PRR11 chr17 57247109 + Exonic hg19 BRCA TCGA-A2-A0YG-01A 1897 2323 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 70788 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-PSMD3 RARA chr17 38487648 - PSMD3 chr17 38151207 + Exonic hg19 BRCA TCGA-EW-A1J3-01A 142 51 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q21.1 Seq+ 70789 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-RP11-1407O15.2 RARA chr17 38474700 - RP11-1407O15.2 chr17 36359042 - Exonic hg19 BRCA TCGA-BH-A0DD-01A 26 11 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor 70790 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-SKAP1 RARA chr17 38487648 - SKAP1 chr17 46214699 - Exonic hg19 BRCA TCGA-B6-A0IN-01A 232 116 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q21.32 Seq+ 70791 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-SLC9A3R1 RARA chr17 38508759 - SLC9A3R1 chr17 72758151 + Exonic hg19 UCS TCGA-N8-A4PQ-01A 113 58 In-Frame Intra-chr q21.2 Oncogene Transcription factor q25.1 Tumor suppressor gene Seq+ 70792 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-STAC2 RARA chr17 38474700 - STAC2 chr17 37374426 - Exonic hg19 LUAD TCGA-55-1592-01A 62 29 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q12 Seq+ 70793 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-STAT3 RARA chr17 38465538 - STAT3 chr17 40500557 - Exonic hg19 BRCA TCGA-EW-A1J3-01A 72 19 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 70794 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-WIPF2 RARA chr17 38487648 - WIPF2 chr17 38430042 + Exonic hg19 BRCA TCGA-BH-A202-01A 178 44 In-Frame Intra-chr q21.2 Oncogene Transcription factor q21.2 Seq+ 70795 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARA-ZNF595 RARA chr17 38487648 - ZNF595 chr4 59323 + Exonic hg19 BRCA TCGA-AR-A0TX-01A 231 124 In-Frame Inter-chr q21.2 Oncogene Transcription factor p16.3 Transcription factor Seq+ 70796 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARB-FAM19A4 RARB chr3 25542814 - FAM19A4 chr3 68802169 - Exonic hg19 PRAD TCGA-EJ-5501-01A 2 1 In-Frame Intra-chr p24.2 Tumor suppressor gene Transcription factor p14.1 Seq+ 70797 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARB-OSBPL10 RARB chr3 25216066 - OSBPL10 chr3 31921322 - Exonic hg19 SKCM TCGA-GF-A6C9-06A 5 3 5'UTR-CDS Intra-chr p24.2 Tumor suppressor gene Transcription factor p22.3 Seq+ 70798 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARB-PRDM8 RARB chr3 25216066 - PRDM8 chr4 81112626 + Exonic hg19 SARC TCGA-DX-A1KY-01A 5 1 5'UTR-5'UTR Inter-chr p24.2 Tumor suppressor gene Transcription factor q21.21 Transcription factor Seq+ 70799 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARG-BCAS1 RARG chr12 53621146 - BCAS1 chr20 52675262 - Exonic hg19 BLCA TCGA-K4-A3WS-01A 5 2 CDS-5'UTR Inter-chr q13.13 Transcription factor q13.2 Seq+ 70800 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARRES1-RSRC1 RARRES1 chr3 158431586 - RSRC1 chr3 158072646 + Exonic hg19 BLCA TCGA-G2-AA3F-01A 22 36 In-Frame Intra-chr q25.32 q25.32 Seq+ 70801 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARRES3-TGFBI RARRES3 chr11 63313929 - TGFBI chr5 135396523 + Exonic hg19 BLCA TCGA-E7-A7DV-01A 3 1 3'UTR-CDS Inter-chr q12.3 Tumor suppressor gene q31.1 Tumor suppressor gene 70802 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARS2-IP6K3 RARS2 chr6 88299640 - IP6K3 chr6 33707038 - Exonic hg19 LIHC TCGA-DD-A11D-01A 2 4 CDS-5'UTR Intra-chr q15 p21.31 Seq+ 70803 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RARS2-SMAP1 RARS2 chr6 88299640 - SMAP1 chr6 71508360 + Exonic hg19 BRCA TCGA-AR-A24Z-01A 3 4 In-Frame Intra-chr q15 q13 Seq+ 70804 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASA1-CDH12 RASA1 chr5 86564807 - CDH12 chr5 22212752 - Exonic hg19 PRAD TCGA-EJ-7782-01A 4 5 5'UTR-5'UTR Intra-chr q14.3 p14.3 Seq+ 70805 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASA1-FAM174A RASA1 chr5 86649052 - FAM174A chr5 99897758 + Exonic hg19 PRAD TCGA-ZG-A8QX-01A 9 10 Out-of-frame Intra-chr q14.3 q21.1 Seq+ 70806 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASA1-FNIP1 RASA1 chr5 86564807 - FNIP1 chr5 130782396 - Exonic hg19 LUAD TCGA-05-4397-01A 5 3 Out-of-frame Intra-chr q14.3 q31.1 70807 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASA1-XRCC4 RASA1 chr5 86645181 - XRCC4 chr5 82648944 + Exonic hg19 SARC TCGA-K1-A6RV-01A 7 4 In-Frame Intra-chr q14.3 q14.2 Seq+ 70808 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASA2-ACPL2 RASA2 chr3 141206058 - ACPL2 chr3 140997184 + Exonic hg19 LUSC TCGA-66-2758-01A 14 14 In-Frame Intra-chr q23 Seq+ 70809 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASA2-ACPL2 RASA2 chr3 141206058 - ACPL2 chr3 140997184 + Exonic hg19 LUSC TCGA-77-7142-01A 5 6 In-Frame Intra-chr q23 Seq+ 70810 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASA2-COBRA1 RASA2 chr3 141278837 - COBRA1 chr9 140157489 + Exonic hg19 BRCA TCGA-BH-A0BL-01A 6 10 Out-of-frame Inter-chr q23 70811 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASA2-KALRN RASA2 chr3 141206058 - KALRN chr3 124017638 + Exonic hg19 LUSC TCGA-85-8277-01A 12 8 Out-of-frame Intra-chr q23 q21.1 Seq+ 70812 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASA2-SPSB4 RASA2 chr3 141259451 - SPSB4 chr3 140865984 + Exonic hg19 LUSC TCGA-NC-A5HL-01A 3 1 Out-of-frame Intra-chr q23 q23 Seq+ 70813 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASA2-SUCNR1 RASA2 chr3 141235273 - SUCNR1 chr3 151597640 + Exonic hg19 OV TCGA-09-1669-01A 7 7 CDS-5'UTR Intra-chr q23 q25.1 Seq+ 70814 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASA2-ZBTB38 RASA2 chr3 141206058 - ZBTB38 chr3 141161231 + Exonic hg19 LUAD TCGA-05-4427-01A 2 2 CDS-5'UTR Intra-chr q23 q23 Transcription factor Seq+ 70815 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASA2-ZBTB38 RASA2 chr3 141206058 - ZBTB38 chr3 141161231 + Exonic hg19 BLCA TCGA-DK-A3IT-01A 3 2 CDS-5'UTR Intra-chr q23 q23 Transcription factor Seq+ 70816 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASA3-KCNG2 RASA3 chr13 114817527 - KCNG2 chr18 77659040 + Exonic hg19 LGG TCGA-FG-A711-01A 21 22 Out-of-frame Inter-chr q23 Seq+ 70817 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASA3-SCARA3 RASA3 chr13 114765061 - SCARA3 chr8 27528417 + Exonic hg19 COAD TCGA-DM-A28A-01A 5 3 Out-of-frame Inter-chr p21.1 Seq+ 70818 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASAL1-DDX54 RASAL1 chr12 113552605 - DDX54 chr12 113603837 - Exonic hg19 KIRP TCGA-A4-A5Y0-01A 6 5 Out-of-frame Intra-chr q24.13 Tumor suppressor gene q24.13 Seq+ 70819 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASAL2-AL359075.1 RASAL2 chr1 178269253 - AL359075.1 chr1 177905500 - Exonic hg19 PRAD TCGA-V1-A9ZK-01A 4 2 Out-of-frame Intra-chr q25.2 Tumor suppressor gene q25.2 70820 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASAL2-ANKRD45 RASAL2 chr1 178359341 - ANKRD45 chr1 173628572 - Exonic hg19 BLCA TCGA-XF-A9T8-01A 7 1 CDS-5'UTR Intra-chr q25.2 Tumor suppressor gene q25.1 Seq+ 70821 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASAL2-COPA RASAL2 chr1 178269253 - COPA chr1 160310084 - Exonic hg19 CHOL TCGA-4G-AAZO-01A 19 13 In-Frame Intra-chr q25.2 Tumor suppressor gene q23.2 Seq+ 70822 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASAL2-GALNTL6 RASAL2 chr1 178269253 - GALNTL6 chr4 173730512 + Exonic hg19 LUAD TCGA-78-8640-01A 3 3 In-Frame Inter-chr q25.2 Tumor suppressor gene q34.1 Seq+ 70823 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASAL2-KIF14 RASAL2 chr1 178252826 - KIF14 chr1 200544819 - Exonic hg19 SKCM TCGA-BF-AAP4-01A 28 13 In-Frame Intra-chr q25.2 Tumor suppressor gene q32.1 Seq+ 70824 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASAL2-NUF2 RASAL2 chr1 178063829 - NUF2 chr1 163295822 + Exonic hg19 PRAD TCGA-EJ-5518-01A 3 2 5'UTR-5'UTR Intra-chr q25.2 Tumor suppressor gene q23.3 70825 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASAL2-RABGAP1L RASAL2 chr1 178359341 - RABGAP1L chr1 174200283 + Exonic hg19 PRAD TCGA-EJ-5518-01A 37 17 Out-of-frame Intra-chr q25.2 Tumor suppressor gene q25.1 Seq+ 70826 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASAL2-RHBDF1 RASAL2 chr1 178269253 - RHBDF1 chr16 115037 - Exonic hg19 SARC TCGA-DX-A8BM-01A 3 2 5'UTR-5'UTR Inter-chr q25.2 Tumor suppressor gene p13.3 Seq+ 70827 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASAL2-SOAT1 RASAL2 chr1 178063829 - SOAT1 chr1 179292572 + Exonic hg19 LUSC TCGA-77-8139-01A 4 1 In-Frame Intra-chr q25.2 Tumor suppressor gene q25.2 70828 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASAL2-ZNF695 RASAL2 chr1 178063829 - ZNF695 chr1 247109129 - Exonic hg19 BRCA TCGA-B6-A0RS-01A 2 1 Out-of-frame Intra-chr q25.2 Tumor suppressor gene q44 Transcription factor 70829 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASD1-VPS4A RASD1 chr17 17397751 - VPS4A chr16 69349911 + Exonic hg19 PRAD TCGA-HC-7737-01A 2 8 3'UTR-CDS Inter-chr p11.2 q22.1 70830 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASEF-OSTF1 RASEF chr9 85605306 - OSTF1 chr9 77732420 + Exonic hg19 PRAD TCGA-KK-A8I6-01A 9 10 Out-of-frame Intra-chr q21.32 q21.13 Seq+ 70831 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASGRF1-HOMER2 RASGRF1 chr15 79382565 - HOMER2 chr15 83561593 - Exonic hg19 PRAD TCGA-KK-A7AP-01A 6 5 Out-of-frame Intra-chr q25.1 q25.2 Tumor suppressor gene Seq+ 70832 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASGRP1-CD47 RASGRP1 chr15 38852022 - CD47 chr3 107799191 - Exonic hg19 UCEC TCGA-AJ-A3EM-01A 25 10 In-Frame Inter-chr q14 q13.12 Seq+ 70833 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASGRP1-LRRC4C RASGRP1 chr15 38852022 - LRRC4C chr11 40162403 - Exonic hg19 BRCA TCGA-B6-A0RG-01A 8 13 CDS-5'UTR Inter-chr q14 p12 Seq+ 70834 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASL11A-DHRS12 RASL11A chr13 27845205 - DHRS12 chr13 52365393 - Exonic hg19 BLCA TCGA-GC-A3RC-01A 4 2 Out-of-frame Intra-chr q12.2 Tumor suppressor gene q14.3 Seq+ 70835 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASSF3-GYS2 RASSF3 chr12 65004523 - GYS2 chr12 21733457 - Exonic hg19 PRAD TCGA-V1-A8WL-01A 3 2 Out-of-frame Intra-chr q14.2 Tumor suppressor gene p12.1 Seq+ 70836 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASSF3-ITGA7 RASSF3 chr12 65004523 - ITGA7 chr12 56079072 - Exonic hg19 SKCM TCGA-GN-A26D-06A 1874 1447 In-Frame Intra-chr q14.2 Tumor suppressor gene q13.2 Tumor suppressor gene Seq+ 70837 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASSF3-PPP3CA RASSF3 chr12 65091347 - PPP3CA chr4 102269435 - Exonic hg19 PRAD TCGA-CH-5761-01A 2 4 Out-of-frame Inter-chr q14.2 Tumor suppressor gene q24 70838 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASSF3-SNX10 RASSF3 chr12 65004523 - SNX10 chr7 26386040 + Exonic hg19 LGG TCGA-DU-A5TY-01A 2 3 5'UTR-5'UTR Inter-chr q14.2 Tumor suppressor gene p15.2 Seq+ 70839 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASSF3-STK10 RASSF3 chr12 65004523 - STK10 chr5 171491816 - Exonic hg19 SARC TCGA-FX-A2QS-01A 233 196 In-Frame Inter-chr q14.2 Tumor suppressor gene q35.1 Tumor suppressor gene Seq+ 70840 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASSF3-TBK1 RASSF3 chr12 65004523 - TBK1 chr12 64889263 + Exonic hg19 READ TCGA-EF-5830-01A 18 16 In-Frame Intra-chr q14.2 Tumor suppressor gene q14.2 Other:IKK Seq+ 70841 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASSF3-TSPAN8 RASSF3 chr12 65078674 - TSPAN8 chr12 71835367 - Exonic hg19 PAAD TCGA-HZ-A49I-01A 10 5 Out-of-frame Intra-chr q14.2 Tumor suppressor gene q21.1 70842 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASSF4-TMEM72 RASSF4 chr10 45480418 - TMEM72 chr10 45423369 + Exonic hg19 BRCA TCGA-GI-A2C9-01A 2 1 Out-of-frame Intra-chr q11.21 Tumor suppressor gene q11.21 70843 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASSF5-IKBKE RASSF5 chr1 206711622 - IKBKE chr1 206644499 + Exonic hg19 HNSC TCGA-DQ-7591-01A 5 3 5'UTR-5'UTR Intra-chr q32.1 Tumor suppressor gene q32.1 Oncogene 70844 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASSF6-LEMD3 RASSF6 chr4 74459168 - LEMD3 chr12 65639449 + Exonic hg19 BRCA TCGA-3C-AAAU-01A 6 6 In-Frame Inter-chr q13.3 q14.3 Seq+ 70845 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASSF7-DEAF1 RASSF7 chr11 561033 - DEAF1 chr11 654051 - Exonic hg19 LUSC TCGA-85-7843-01A 11 37 5'UTR-CDS Intra-chr p15.5 Transcription factor Seq+ 70846 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASSF8-CMAS RASSF8 chr12 26112081 - CMAS chr12 22215215 + Exonic hg19 BLCA TCGA-ZF-A9R3-01A 21 14 5'UTR-CDS Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 70847 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASSF8-ETNK1 RASSF8 chr12 26148063 - ETNK1 chr12 22796697 + Exonic hg19 CESC TCGA-BI-A0VS-01A 32 16 5'UTR-CDS Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 70848 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASSF8-RERGL RASSF8 chr12 26112081 - RERGL chr12 18241890 - Exonic hg19 BRCA TCGA-E2-A1LL-01A 21 14 5'UTR-CDS Intra-chr p12.1 Tumor suppressor gene p12.3 Seq+ 70849 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASSF8-SLC47A2 RASSF8 chr12 26112081 - SLC47A2 chr17 19584983 - Exonic hg19 BRCA TCGA-OL-A5RZ-01A 3 3 5'UTR-CDS Inter-chr p12.1 Tumor suppressor gene p11.2 70850 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RASSF8-ST8SIA1 RASSF8 chr12 26112081 - ST8SIA1 chr12 22354972 - Exonic hg19 UCS TCGA-ND-A4WF-01A 10 4 5'UTR-CDS Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 70851 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAVER1-C19orf6 RAVER1 chr19 10439318 - C19orf6 chr19 1014472 - Exonic hg19 STAD TCGA-FP-A8CX-01A 2 32 In-Frame Intra-chr p13.2 Seq+ 70852 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAVER1-DOCK6 RAVER1 chr19 10439318 - DOCK6 chr19 11356554 - Exonic hg19 GBM TCGA-06-1804-01A 2 11 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 70853 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAVER1-ICAM3 RAVER1 chr19 10443965 - ICAM3 chr19 10449624 - Exonic hg19 HNSC TCGA-QK-A6VC-01A 8 5 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 70854 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RAVER1-TYK2 RAVER1 chr19 10426895 - TYK2 chr19 10491352 - Exonic hg19 ACC TCGA-OR-A5JP-01A 2 1 Out-of-frame Intra-chr p13.2 p13.2 TK:JakA 70855 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RB1-CLEC2B RB1 chr13 48881542 - CLEC2B chr12 10015172 - Exonic hg19 SARC TCGA-DX-A3UF-01A 30 18 CDS-5'UTR Inter-chr q14.2 Oncogene Tumor suppressor gene p13.31 Seq+ 70856 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RB1-CNIH3 RB1 chr13 48881542 - CNIH3 chr1 224868660 + Exonic hg19 LUSC TCGA-60-2695-01A 33 23 In-Frame Inter-chr q14.2 Oncogene Tumor suppressor gene q42.12 Seq+ 70857 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RB1-DIAPH3 RB1 chr13 48881542 - DIAPH3 chr13 60707123 - Exonic hg19 SARC TCGA-LI-A9QH-01A 16 9 In-Frame Intra-chr q14.2 Oncogene Tumor suppressor gene q21.2 Seq+ 70858 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RB1-ESR2 RB1 chr13 48955579 - ESR2 chr14 64749793 - Exonic hg19 SARC TCGA-X2-A95T-01A 3 1 CDS-5'UTR Inter-chr q14.2 Oncogene Tumor suppressor gene q23.3 Tumor suppressor gene Transcription factor Seq+ 70859 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RB1-FRYL RB1 chr13 49039504 - FRYL chr4 48636507 - Exonic hg19 SARC TCGA-IF-A4AK-01A 6 2 CDS-5'UTR Inter-chr q14.2 Oncogene Tumor suppressor gene p11 Seq+ 70860 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RB1-GADD45GIP1 RB1 chr13 48955579 - GADD45GIP1 chr19 13065340 - Exonic hg19 LUSC TCGA-52-7809-01A 18 11 Out-of-frame Inter-chr q14.2 Oncogene Tumor suppressor gene p13.13 Tumor suppressor gene Seq+ 70861 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RB1-HTR2C RB1 chr13 48881542 - HTR2C chrX 114141152 + Exonic hg19 HNSC TCGA-D6-6827-01A 19 14 Out-of-frame Inter-chr q14.2 Oncogene Tumor suppressor gene q23 Seq+ 70862 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RB1-KCNRG RB1 chr13 48939107 - KCNRG chr13 50594350 + Exonic hg19 OV TCGA-24-1470-01A 4 1 Out-of-frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Tumor suppressor gene Seq+ 70863 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RB1-KIAA0226L RB1 chr13 48955579 - KIAA0226L chr13 46918966 - Exonic hg19 SARC TCGA-SI-AA8B-01A 10 3 In-Frame Intra-chr q14.2 Oncogene Tumor suppressor gene 70864 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RB1-MED4 RB1 chr13 48916850 - MED4 chr13 48664554 - Exonic hg19 SKCM TCGA-FW-A5DX-01A 23 12 In-Frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Seq+ 70865 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RB1-MED4 RB1 chr13 48916850 - MED4 chr13 48664554 - Exonic hg19 SARC TCGA-N1-A6IA-01A 36 25 In-Frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Seq+ 70866 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RB1-WDFY2 RB1 chr13 48881542 - WDFY2 chr13 52325446 + Exonic hg19 BLCA TCGA-HQ-A5NE-01A 9 6 Out-of-frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.3 Seq+ 70867 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RB1CC1-MMP16 RB1CC1 chr8 53596109 - MMP16 chr8 89086971 - Exonic hg19 PRAD TCGA-FC-A4JI-01A 3 1 In-Frame Intra-chr q11.23 Tumor suppressor gene q21.3 Seq+ 70868 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RB1CC1-PTPN3 RB1CC1 chr8 53580581 - PTPN3 chr9 112153841 - Exonic hg19 PRAD TCGA-KK-A8IJ-01A 41 21 In-Frame Inter-chr q11.23 Tumor suppressor gene q31.3 Seq+ 70869 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RB1CC1-SNX16 RB1CC1 chr8 53568568 - SNX16 chr8 82736175 - Exonic hg19 SKCM TCGA-EE-A2MH-06A 5 7 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q21.13 Seq+ 70870 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBBP7-NDUFAF4 RBBP7 chrX 16888161 - NDUFAF4 chr6 97344723 - Exonic hg19 SARC TCGA-DX-A240-01A 28 29 In-Frame Inter-chr p22.2 Tumor suppressor gene q16.1 Seq+ 70871 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBBP7-TTC24 RBBP7 chrX 16888161 - TTC24 chr1 156552023 + Exonic hg19 SARC TCGA-DX-A1KY-01A 27 16 In-Frame Inter-chr p22.2 Tumor suppressor gene q22 Seq+ 70872 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBBP8-ANXA4 RBBP8 chr18 20529676 - ANXA4 chr2 70008652 + Exonic hg19 LUSC TCGA-60-2715-01A 11 7 CDS-5'UTR Inter-chr q11.2 Tumor suppressor gene p13.3 Seq+ 70873 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBBP8-FAM126A RBBP8 chr18 20564953 - FAM126A chr7 23030758 - Exonic hg19 LGG TCGA-HT-7477-01B 2 1 CDS-5'UTR Inter-chr q11.2 Tumor suppressor gene p15.3 70874 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBBP8-TAF4B RBBP8 chr18 20516923 - TAF4B chr18 23845134 + Exonic hg19 HNSC TCGA-BB-7872-01A 21 9 In-Frame Intra-chr q11.2 Tumor suppressor gene q11.2 Seq+ 70875 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBBP8-TP53 RBBP8 chr18 20596887 - TP53 chr17 7579940 - Exonic hg19 BLCA TCGA-DK-A2I6-01A 7 11 CDS-5'UTR Inter-chr q11.2 Tumor suppressor gene p13.1 Oncogene Tumor suppressor gene Transcription factor Seq+ 70876 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBCK1-CLCN7 RBCK1 chr20 400375 - CLCN7 chr16 1509188 - Exonic hg19 COAD TCGA-5M-AAT4-01A 2 1 In-Frame Inter-chr p13 Transcription factor p13.3 Seq+ 70877 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBCK1-TRIB3 RBCK1 chr20 398574 - TRIB3 chr20 368655 + Exonic hg19 LIHC TCGA-RC-A7SK-01A 3 6 CDS-5'UTR Intra-chr p13 Transcription factor p13 Seq+ 70878 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBFA-XRCC5 RBFA chr18 77802219 - XRCC5 chr2 217054948 + Exonic hg19 LGG TCGA-FG-A711-01A 2 9 Out-of-frame Inter-chr q23 q35 Tumor suppressor gene Seq+ 70879 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBFOX2-C18orf45 RBFOX2 chr22 36334895 - C18orf45 chr18 20878031 - Exonic hg19 SARC TCGA-MJ-A68H-01A 4 2 Out-of-frame Inter-chr 70880 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBFOX2-CORO1C RBFOX2 chr22 36236239 - CORO1C chr12 109055934 - Exonic hg19 SARC TCGA-3B-A9HO-01A 7 1 In-Frame Inter-chr q24.11 70881 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBFOX2-FAM86A RBFOX2 chr22 36424288 - FAM86A chr16 5135733 - Exonic hg19 LIHC TCGA-LG-A9QC-01A 8 6 Out-of-frame Inter-chr Seq+ 70882 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBFOX2-LGALS2 RBFOX2 chr22 36424288 - LGALS2 chr22 37967938 - Exonic hg19 GBM TCGA-19-2625-01A 6 24 In-Frame Intra-chr q13.1 Seq+ 70883 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBFOX2-MKL1 RBFOX2 chr22 36142520 - MKL1 chr22 40859290 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 4 5 CDS-5'UTR Intra-chr q13.2 Seq+ 70884 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBFOX2-MPPED1 RBFOX2 chr22 36334895 - MPPED1 chr22 43870616 + Exonic hg19 LGG TCGA-S9-A7R7-01A 8 9 Out-of-frame Intra-chr q13.2 Seq+ 70885 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBFOX2-MYH9 RBFOX2 chr22 36205827 - MYH9 chr22 36685343 - Exonic hg19 UCS TCGA-N9-A4Q8-01A 52 31 In-Frame Intra-chr q12.3 Oncogene Tumor suppressor gene Seq+ 70886 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBFOX2-NTSR1 RBFOX2 chr22 36424288 - NTSR1 chr20 61386037 + Exonic hg19 BRCA TCGA-BH-A0H7-01A 9 2 In-Frame Inter-chr q13.33 Seq+ 70887 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBFOX2-RAC2 RBFOX2 chr22 36205827 - RAC2 chr22 37622843 - Exonic hg19 LIHC TCGA-EP-A2KA-01A 18 9 Out-of-frame Intra-chr q13.1 Seq+ 70888 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBFOX2-TST RBFOX2 chr22 36424288 - TST chr22 37407366 - Exonic hg19 UCS TCGA-N9-A4PZ-01A 22 14 Out-of-frame Intra-chr q12.3 Seq+ 70889 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBKS-AC008073.6 RBKS chr2 28050434 - AC008073.6 chr2 24387068 + Exonic hg19 SKCM TCGA-D3-A3CF-06A 4 3 Out-of-frame Intra-chr p23.2 70890 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBL1-BCAS1 RBL1 chr20 35651053 - BCAS1 chr20 52561535 - Exonic hg19 UCEC TCGA-EY-A547-01A 11 15 In-Frame Intra-chr q11.23 Tumor suppressor gene q13.2 Seq+ 70891 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBL1-CPNE1 RBL1 chr20 35724176 - CPNE1 chr20 34220845 - Exonic hg19 BRCA TCGA-C8-A134-01A 43 45 In-Frame Intra-chr q11.23 Tumor suppressor gene q11.22 Seq+ 70892 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBL1-CTNNBL1 RBL1 chr20 35717392 - CTNNBL1 chr20 36500327 + Exonic hg19 BRCA TCGA-AO-A03M-01B 84 72 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 70893 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBL1-GPCPD1 RBL1 chr20 35724176 - GPCPD1 chr20 5556624 - Exonic hg19 BLCA TCGA-HQ-A2OF-01A 3 1 In-Frame Intra-chr q11.23 Tumor suppressor gene p12.3 Seq+ 70894 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM10-AL359075.1 RBM10 chrX 47006897 - AL359075.1 chr1 177937174 - Exonic hg19 LUSC TCGA-77-8136-01A 16 7 Out-of-frame Inter-chr p11.3 q25.2 70895 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM10-CMAS RBM10 chrX 47006897 - CMAS chr12 22208083 + Exonic hg19 LUAD TCGA-86-7954-01A 22 12 In-Frame Inter-chr p11.3 p12.1 Seq+ 70896 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM10-PHF16 RBM10 chrX 47028897 - PHF16 chrX 46857522 + Exonic hg19 BRCA TCGA-D8-A1JB-01A 4 4 In-Frame Intra-chr p11.3 70897 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM10-TFE3 RBM10 chrX 47041725 - TFE3 chrX 48895639 - Exonic hg19 KIRP TCGA-DZ-6131-01A 126 45 In-Frame Intra-chr p11.3 p11.23 Oncogene Transcription factor KB Pub Seq+ 70898 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM12-RP11-123B3.6 RBM12 chr20 34252801 - RP11-123B3.6 chr10 50732823 - Exonic hg19 BRCA TCGA-A7-A2KD-01A 214 9 Out-of-frame Inter-chr q11.22 70899 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM12B-RSPO2 RBM12B chr8 94752857 - RSPO2 chr8 109001472 - Exonic hg19 LUSC TCGA-60-2706-01A 16 7 5'UTR-CDS Intra-chr q22.1 q23.1 Seq+ 70900 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM14-BBS1 RBM14 chr11 66386032 - BBS1 chr11 66283011 + Exonic hg19 ACC TCGA-OR-A5J1-01A 7 6 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 Seq+ 70901 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM14-CCS RBM14 chr11 66393149 - CCS chr11 66361113 + Exonic hg19 KIRC TCGA-B0-4833-01A 5 5 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 Seq+ 70902 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM17-PRKACB RBM17 chr10 6148201 - PRKACB chr1 84644860 + Exonic hg19 HNSC TCGA-MT-A67F-01A 33 12 In-Frame Inter-chr p15.1 p31.1 Seq+ 70903 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM17-PSAP RBM17 chr10 6131156 - PSAP chr10 73594262 - Exonic hg19 BLCA TCGA-CU-A0YO-01A 2 6 5'UTR-CDS Intra-chr p15.1 q22.1 Seq+ 70904 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM17-TWSG1 RBM17 chr10 6131156 - TWSG1 chr18 9337191 + Exonic hg19 LUAD TCGA-55-7574-01A 2 1 5'UTR-5'UTR Inter-chr p15.1 p11.22 70905 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM18-RAB14 RBM18 chr9 125026994 - RAB14 chr9 123955697 - Exonic hg19 COAD TCGA-CM-4747-01A 2 2 5'UTR-5'UTR Intra-chr q33.2 q33.2 70906 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM19-CLK2 RBM19 chr12 114364859 - CLK2 chr1 155240768 - Exonic hg19 PRAD TCGA-VP-A87K-01A 5 3 CDS-5'UTR Inter-chr q24.21 q22 CMGC:CLK Seq+ 70907 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM19-PTPRQ RBM19 chr12 114352774 - PTPRQ chr12 80981908 + Exonic hg19 SKCM TCGA-D3-A3BZ-06A 79 58 Out-of-frame Intra-chr q24.21 q21.31 Seq+ 70908 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM23-SLC7A8 RBM23 chr14 23388208 - SLC7A8 chr14 23635749 - Exonic hg19 BRCA TCGA-C8-A12W-01A 3 2 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 70909 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM25-VRTN RBM25 chr14 73525413 - VRTN chr14 74804426 + Exonic hg19 LUSC TCGA-22-4593-01A 5 1 Out-of-frame Intra-chr q24.2 q24.3 Seq+ 70910 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM26-AC100793.1 RBM26 chr13 79908479 - AC100793.1 chr17 40912729 - Exonic hg19 SARC TCGA-SG-A6Z4-01A 7 1 Out-of-frame Inter-chr q31.1 q21.2 70911 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM27-LARS RBM27 chr5 145583387 - LARS chr5 145557228 - Exonic hg19 DLBC TCGA-FA-A7DS-01A 14 22 Out-of-frame Intra-chr q32 q32 Seq+ 70912 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM27-SLC35E2B RBM27 chr5 145598666 - SLC35E2B chr1 1597458 - Exonic hg19 BLCA TCGA-CU-A0YO-01A 17 12 Out-of-frame Inter-chr q32 p36.33 Seq+ 70913 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM28-AOAH RBM28 chr7 127957712 - AOAH chr7 36634036 - Exonic hg19 THCA TCGA-CE-A484-01A 4 3 In-Frame Intra-chr q32.1 p14.2 Seq+ 70914 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM28-MLL3 RBM28 chr7 127970872 - MLL3 chr7 151882716 - Exonic hg19 UCEC TCGA-AX-A3FV-01A 79 85 In-Frame Intra-chr q32.1 Tumor suppressor gene Seq+ 70915 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM28-MLL3 RBM28 chr7 127961319 - MLL3 chr7 151882716 - Exonic hg19 BRCA TCGA-C8-A26X-01A 47 79 Out-of-frame Intra-chr q32.1 Tumor suppressor gene Seq+ 70916 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM33-PTPRN2 RBM33 chr7 155465609 - PTPRN2 chr7 157997965 - Exonic hg19 CESC TCGA-VS-A9UB-01A 7 1 Out-of-frame Intra-chr q36.3 q36.3 70917 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM34-CARD10 RBM34 chr1 235311719 - CARD10 chr22 37900776 - Exonic hg19 BRCA TCGA-C8-A12K-01A 13 11 Out-of-frame Inter-chr q42.3 q13.1 Seq+ 70918 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM38-CAPN5 RBM38 chr20 55968389 - CAPN5 chr11 76823635 + Exonic hg19 SKCM TCGA-YG-AA3P-06A 9 1 Out-of-frame Inter-chr q13.31 Tumor suppressor gene q13.5 Seq+ 70919 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM38-DNAJC5B RBM38 chr20 55968389 - DNAJC5B chr8 66988895 + Exonic hg19 BRCA TCGA-3C-AALJ-01A 6 8 In-Frame Inter-chr q13.31 Tumor suppressor gene q13.1 Seq+ 70920 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM38-FRMD4B RBM38 chr20 55968389 - FRMD4B chr3 69267530 - Exonic hg19 LUSC TCGA-L3-A524-01A 595 269 In-Frame Inter-chr q13.31 Tumor suppressor gene p14.1 Seq+ 70921 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM38-LSM7 RBM38 chr20 55968389 - LSM7 chr19 2324195 - Exonic hg19 SARC TCGA-3B-A9HJ-01A 57 18 Out-of-frame Inter-chr q13.31 Tumor suppressor gene p13.3 Seq+ 70922 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM38-RAE1 RBM38 chr20 55968389 - RAE1 chr20 55929088 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 3 5 CDS-5'UTR Intra-chr q13.31 Tumor suppressor gene q13.31 Seq+ 70923 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM38-SPO11 RBM38 chr20 55968389 - SPO11 chr20 55917785 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 9 6 In-Frame Intra-chr q13.31 Tumor suppressor gene q13.31 Seq+ 70924 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM39-C22orf24 RBM39 chr20 34326890 - C22orf24 chr22 32334101 - Exonic hg19 ESCA TCGA-L5-A8NF-01A 53 289 CDS-5'UTR Inter-chr q11.22 q12.3 Seq+ 70925 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM39-CRYZL1 RBM39 chr20 34304662 - CRYZL1 chr21 34975843 - Exonic hg19 SARC TCGA-DX-A3LW-01A 15 11 Out-of-frame Inter-chr q11.22 q22.11 Seq+ 70926 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM39-OCA2 RBM39 chr20 34328746 - OCA2 chr15 28171400 - Exonic hg19 SARC TCGA-FX-A3NK-01A 4 6 Out-of-frame Inter-chr q11.22 q13.1 Seq+ 70927 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM39-PRDM5 RBM39 chr20 34329863 - PRDM5 chr4 121742500 - Exonic hg19 BLCA TCGA-BT-A2LD-01A 4 6 5'UTR-CDS Inter-chr q11.22 q27 Tumor suppressor gene Transcription factor Seq+ 70928 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM39-VMP1 RBM39 chr20 34309662 - VMP1 chr17 57842332 + Exonic hg19 BRCA TCGA-AC-A62V-01A 44 49 In-Frame Inter-chr q11.22 q23.1 Seq+ 70929 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM39-WFDC13 RBM39 chr20 34300941 - WFDC13 chr20 44333083 + Exonic hg19 PRAD TCGA-EJ-5514-01A 11 5 In-Frame Intra-chr q11.22 q13.12 Seq+ 70930 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM45-DGUOK RBM45 chr2 178977573 - DGUOK chr2 74173846 + Exonic hg19 BRCA TCGA-BH-A1ES-01A 4 4 In-Frame Intra-chr q31.2 p13.1 70931 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM47-APBB2 RBM47 chr4 40631413 - APBB2 chr4 40832594 - Exonic hg19 OV TCGA-24-2298-01A 6 11 5'UTR-5'UTR Intra-chr p14 p13 Seq+ 70932 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM47-APBB2 RBM47 chr4 40546439 - APBB2 chr4 41102767 - Exonic hg19 LUAD TCGA-44-A479-01A 2 1 5'UTR-5'UTR Intra-chr p14 p13 Seq+ 70933 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM47-APBB2 RBM47 chr4 40631413 - APBB2 chr4 40818276 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 5 1 5'UTR-CDS Intra-chr p14 p13 Seq+ 70934 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM47-APBB2 RBM47 chr4 40631413 - APBB2 chr4 40832594 - Exonic hg19 ESCA TCGA-L5-A8NI-01A 4 55 5'UTR-5'UTR Intra-chr p14 p13 Seq+ 70935 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM47-EXOC1 RBM47 chr4 40546439 - EXOC1 chr4 56744083 + Exonic hg19 OV TCGA-36-1571-01A 11 4 5'UTR-CDS Intra-chr p14 q12 Seq+ 70936 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM47-IDO2 RBM47 chr4 40546439 - IDO2 chr8 39821127 + Exonic hg19 PRAD TCGA-YL-A8SR-01B 37 36 5'UTR-CDS Inter-chr p14 p11.21 Seq+ 70937 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM47-NRL RBM47 chr4 40516533 - NRL chr14 24552084 - Exonic hg19 KICH TCGA-KL-8339-01A 14 3 5'UTR-5'UTR Inter-chr p14 q12 Transcription factor Seq+ 70938 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM4B-FADD RBM4B chr11 66444139 - FADD chr11 70052239 + Exonic hg19 SARC TCGA-3B-A9HR-01A 22 9 In-Frame Intra-chr q13.2 q13.3 Tumor suppressor gene Seq+ 70939 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM4B-FCHSD2 RBM4B chr11 66444139 - FCHSD2 chr11 72726930 - Exonic hg19 BLCA TCGA-4Z-AA7O-01A 2 2 Out-of-frame Intra-chr q13.2 q13.4 Seq+ 70940 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM4B-PITPNM1 RBM4B chr11 66436086 - PITPNM1 chr11 67261064 - Exonic hg19 SARC TCGA-N1-A6IA-01A 2 1 3'UTR-CDS Intra-chr q13.2 q13.2 70941 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM6-ARIH2 RBM6 chr3 50099541 - ARIH2 chr3 48999045 + Exonic hg19 BRCA TCGA-BH-A1EO-01A 3 1 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 70942 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM6-C3orf54 RBM6 chr3 49977658 - C3orf54 chr3 49841614 + Exonic hg19 LUSC TCGA-L3-A524-01A 6 5 Out-of-frame Intra-chr p21.31 Tumor suppressor gene 70943 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM6-IDH2 RBM6 chr3 49977658 - IDH2 chr15 90634876 - Exonic hg19 LUSC TCGA-85-A53L-01A 16 12 5'UTR-CDS Inter-chr p21.31 Tumor suppressor gene q26.1 Oncogene Seq+ 70944 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM6-RNF123 RBM6 chr3 49977658 - RNF123 chr3 49749912 + Exonic hg19 STAD TCGA-VQ-A91N-01A 3 41 5'UTR-CDS Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 70945 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBM6-TTC7A RBM6 chr3 50106197 - TTC7A chr2 47287908 + Exonic hg19 SARC TCGA-K1-A3PO-01A 4 7 Out-of-frame Inter-chr p21.31 Tumor suppressor gene p21 70946 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBMS1-NT5DC4 RBMS1 chr2 161349800 - NT5DC4 chr2 113479395 + Exonic hg19 SARC TCGA-MB-A8JL-01A 5 4 Out-of-frame Intra-chr q24.2 q14.1 Seq+ 70947 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBMS1-ORC4 RBMS1 chr2 161223727 - ORC4 chr2 148701091 - Exonic hg19 SKCM TCGA-EE-A2GU-06A 12 59 Out-of-frame Intra-chr q24.2 q23.1 Seq+ 70948 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBMS1-SLC20A1 RBMS1 chr2 161349800 - SLC20A1 chr2 113420441 + Exonic hg19 SARC TCGA-MB-A8JL-01A 31 6 In-Frame Intra-chr q24.2 q14.1 Seq+ 70949 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBPJ-C16orf46 RBPJ chr4 26417262 - C16orf46 chr16 81087699 - Exonic hg19 PRAD TCGA-EJ-5527-01A 7 12 In-Frame Inter-chr p15.2 Transcription factor q23.2 Seq+ 70950 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBPJ-SEL1L3 RBPJ chr4 26322670 - SEL1L3 chr4 25835191 - Exonic hg19 SARC TCGA-HB-A3YV-01A 3 6 In-Frame Intra-chr p15.2 Transcription factor p15.2 Seq+ 70951 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBPMS-NTRK3 RBPMS chr8 30361953 - NTRK3 chr15 88576276 - Exonic hg19 THCA TCGA-ET-A39L-01A 78 38 In-Frame Inter-chr p12 q25.3 Oncogene Tumor suppressor gene Seq+ 70952 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RBPMS-RILPL1 RBPMS chr8 30242674 - RILPL1 chr12 123970352 - Exonic hg19 BRCA TCGA-D8-A1JM-01A 30 32 In-Frame Inter-chr p12 q24.31 Seq+ 70953 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RC3H2-GNA14 RC3H2 chr9 125645483 - GNA14 chr9 80049438 - Exonic hg19 BRCA TCGA-A2-A4RW-01A 2 1 In-Frame Intra-chr q33.2 q21.2 70954 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RC3H2-MRRF RC3H2 chr9 125652591 - MRRF chr9 125033143 + Exonic hg19 BRCA TCGA-E2-A15E-06A 3 5 CDS-5'UTR Intra-chr q33.2 q33.2 70955 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RCAN1-GART RCAN1 chr21 35987059 - GART chr21 34871404 - Exonic hg19 BRCA TCGA-D8-A1XF-01A 15 7 CDS-3'UTR Intra-chr q22.12 70956 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RCAN1-RUNX1 RCAN1 chr21 35987059 - RUNX1 chr21 36171759 - Exonic hg19 BRCA TCGA-A7-A6VV-01A 16 13 Out-of-frame Intra-chr q22.12 q22.12 Oncogene Tumor suppressor gene Transcription factor Seq+ 70957 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RCAN1-RUNX1 RCAN1 chr21 35987059 - RUNX1 chr21 36253010 - Exonic hg19 UCS TCGA-N5-A4RT-01A 6 2 In-Frame Intra-chr q22.12 q22.12 Oncogene Tumor suppressor gene Transcription factor Seq+ 70958 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RCBTB2-B3GALT1 RCBTB2 chr13 49085906 - B3GALT1 chr2 168725321 + Exonic hg19 LGG TCGA-TQ-A7RM-01A 2 5 CDS-5'UTR Inter-chr q14.2 q24.3 70959 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RCBTB2-EPSTI1 RCBTB2 chr13 49084765 - EPSTI1 chr13 43500565 - Exonic hg19 HNSC TCGA-RS-A6TP-01A 26 32 In-Frame Intra-chr q14.2 q14.11 Seq+ 70960 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RCBTB2-RB1 RCBTB2 chr13 49070327 - RB1 chr13 48939030 + Exonic hg19 BRCA TCGA-D8-A1XJ-01A 7 1 In-Frame Intra-chr q14.2 q14.2 Oncogene Tumor suppressor gene Seq+ 70961 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RCC1-ITGB3BP RCC1 chr1 28834672 - ITGB3BP chr1 63920639 - Exonic hg19 CESC TCGA-LP-A5U2-01A 2 2 5'UTR-CDS Intra-chr p35.3 p31.3 Seq+ 70962 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RCC1-PHACTR4 RCC1 chr1 28858862 - PHACTR4 chr1 28733921 + Exonic hg19 PAAD TCGA-F2-6879-01A 5 3 5'UTR-5'UTR Intra-chr p35.3 p35.3 Tumor suppressor gene Seq+ 70963 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RCC2-PADI4 RCC2 chr1 17755602 - PADI4 chr1 17681028 + Exonic hg19 BRCA TCGA-A2-A25B-01A 46 28 Out-of-frame Intra-chr Seq+ 70964 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RCCD1-BLM RCCD1 chr15 91498178 - BLM chr15 91326052 + Exonic hg19 LUAD TCGA-38-4630-01A 83 104 5'UTR-CDS Intra-chr q26.1 q26.1 Oncogene Tumor suppressor gene Seq+ 70965 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RCL1-C9orf46 RCL1 chr9 4793227 - C9orf46 chr9 5361888 - Exonic hg19 HNSC TCGA-CN-4733-01A 12 16 Out-of-frame Intra-chr p24.1 70966 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RCL1-SMCP RCL1 chr9 4841357 - SMCP chr1 152856879 + Exonic hg19 UCS TCGA-N8-A4PP-01A 5 3 CDS-5'UTR Inter-chr p24.1 q21.3 Seq+ 70967 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RCN3-FLT3LG RCN3 chr19 50042436 - FLT3LG chr19 49989272 + Exonic hg19 UCEC TCGA-AJ-A3BD-01A 4 3 CDS-3'UTR Intra-chr q13.33 q13.33 Seq+ 70968 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RCOR1-KIT RCOR1 chr14 103148315 - KIT chr4 55561678 + Exonic hg19 PRAD TCGA-EJ-7327-01A 2 2 In-Frame Inter-chr q32.31 q12 TK:PDGFR Oncogene 70969 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RCOR1-LSAMP RCOR1 chr14 103174920 - LSAMP chr3 115571464 - Exonic hg19 LUSC TCGA-77-7142-01A 5 3 Out-of-frame Inter-chr q32.31 q13.31 Tumor suppressor gene Seq+ 70970 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RCOR1-PPP2R5C RCOR1 chr14 103059662 - PPP2R5C chr14 102391478 + Exonic hg19 OV TCGA-13-1410-01A 4 4 Out-of-frame Intra-chr q32.31 q32.31 Tumor suppressor gene Seq+ 70971 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RCOR1-PPP2R5C RCOR1 chr14 103148315 - PPP2R5C chr14 102323023 + Exonic hg19 ACC TCGA-OR-A5J7-01A 9 7 In-Frame Intra-chr q32.31 q32.31 Tumor suppressor gene Seq+ 70972 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RCOR1-TECPR2 RCOR1 chr14 103180954 - TECPR2 chr14 102963316 + Exonic hg19 BLCA TCGA-BT-A3PJ-01A 21 11 In-Frame Intra-chr q32.31 q32.31 Seq+ 70973 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RCOR1-TECPR2 RCOR1 chr14 103167667 - TECPR2 chr14 102963316 + Exonic hg19 HNSC TCGA-CN-A49A-01A 6 1 In-Frame Intra-chr q32.31 q32.31 Seq+ 70974 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RCOR1-TECPR2 RCOR1 chr14 103059662 - TECPR2 chr14 102963316 + Exonic hg19 UCS TCGA-N8-A4PQ-01A 6 3 Out-of-frame Intra-chr q32.31 q32.31 Seq+ 70975 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RCOR1-TMEM111 RCOR1 chr14 103059662 - TMEM111 chr3 10019130 - Exonic hg19 TGCT TCGA-2G-AAGC-01A 6 8 Out-of-frame Inter-chr q32.31 70976 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RCOR3-RPS6KC1 RCOR3 chr1 211477482 - RPS6KC1 chr1 213341201 + Exonic hg19 PRAD TCGA-CH-5790-01A 3 1 In-Frame Intra-chr q32.2 q32.3 70977 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RDH13-NLRP9 RDH13 chr19 55568021 - NLRP9 chr19 56228264 - Exonic hg19 BRCA TCGA-A2-A0D0-01A 5 2 Out-of-frame Intra-chr q13.42 70978 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RDH13-NLRP9 RDH13 chr19 55580690 - NLRP9 chr19 56223956 - Exonic hg19 STAD TCGA-BR-4357-01A 9 5 5'UTR-CDS Intra-chr q13.42 70979 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RDH13-PPP6R1 RDH13 chr19 55568021 - PPP6R1 chr19 55758477 - Exonic hg19 LUAD TCGA-55-8505-01A 29 3 CDS-5'UTR Intra-chr q13.42 Seq+ 70980 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RDH13-RUSC1 RDH13 chr19 55568021 - RUSC1 chr1 155297941 + Exonic hg19 BRCA TCGA-A8-A08F-01A 7 5 Out-of-frame Inter-chr q22 Seq+ 70981 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RECK-ACER3 RECK chr9 36052320 - ACER3 chr11 76687333 + Exonic hg19 SKCM TCGA-DA-A3F3-06A 50 32 In-Frame Inter-chr p13.3 Tumor suppressor gene q13.5 Seq+ 70982 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RECK-TMEM8B RECK chr9 36037095 - TMEM8B chr9 35845972 + Exonic hg19 BRCA TCGA-A7-A4SD-01A 2 1 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p13.3 70983 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RECQL5-CACNA1G RECQL5 chr17 73654378 - CACNA1G chr17 48667832 + Exonic hg19 ACC TCGA-OR-A5JP-01A 4 5 In-Frame Intra-chr q25.1 q21.33 Seq+ 70984 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RECQL5-SEC14L1 RECQL5 chr17 73647266 - SEC14L1 chr17 75186885 + Exonic hg19 BRCA TCGA-A7-A2KD-01A 9 2 Out-of-frame Intra-chr q25.1 q25.2 Seq+ 70985 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RECQL5-UNC13D RECQL5 chr17 73654378 - UNC13D chr17 73839347 - Exonic hg19 STAD TCGA-BR-8678-01A 7 8 In-Frame Intra-chr q25.1 q25.1 Seq+ 70986 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RECQL5-WBP2 RECQL5 chr17 73647266 - WBP2 chr17 73847757 - Exonic hg19 BRCA TCGA-A2-A04R-01A 15 14 In-Frame Intra-chr q25.1 q25.1 Seq+ 70987 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REEP3-RTKN2 REEP3 chr10 65359043 - RTKN2 chr10 64005816 - Exonic hg19 ESCA TCGA-L5-A8NR-01A 4 10 Out-of-frame Intra-chr q21.3 q21.2 Seq+ 70988 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REG1A-PLEKHB2 REG1A chr2 79350545 - PLEKHB2 chr2 131876464 + Exonic hg19 PAAD TCGA-F2-A44H-01A 2 5 Out-of-frame Intra-chr p12 q21.1 70989 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REG3A-RFWD2 REG3A chr2 79384133 - RFWD2 chr1 176129420 - Exonic hg19 COAD TCGA-D5-6536-01A 2 1 Out-of-frame Inter-chr p12 q25.2 Tumor suppressor gene 70990 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REL-MAN1A2 REL chr2 61147777 - MAN1A2 chr1 118035769 + Exonic hg19 LUSC TCGA-60-2726-01A 6 3 In-Frame Inter-chr p16.1 Oncogene Transcription factor p12 Seq+ 70991 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REL-MVP REL chr2 61144152 - MVP chr16 29847025 + Exonic hg19 LUAD TCGA-49-6743-01A 80 56 In-Frame Inter-chr p16.1 Oncogene Transcription factor p11.2 Seq+ 70992 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RELB-IGSF23 RELB chr19 45506254 - IGSF23 chr19 45127000 + Exonic hg19 LUAD TCGA-05-4418-01A 6 1 Out-of-frame Intra-chr q13.32 Transcription factor q13.31 70993 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RELN-CHRM2 RELN chr7 103191514 - CHRM2 chr7 136635750 + Exonic hg19 LUSC TCGA-68-8250-01A 5 3 CDS-5'UTR Intra-chr q22.1 q33 Seq+ 70994 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RELN-ORC5 RELN chr7 103175763 - ORC5 chr7 103767340 - Exonic hg19 LIHC TCGA-CC-A8HV-01A 3 1 In-Frame Intra-chr q22.1 q22.2 Seq+ 70995 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RELN-ORC5 RELN chr7 103270387 - ORC5 chr7 103767340 - Exonic hg19 PRAD TCGA-KK-A5A1-01A 4 5 In-Frame Intra-chr q22.1 q22.2 Seq+ 70996 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RELN-SLC25A26 RELN chr7 103130189 - SLC25A26 chr3 66419902 + Exonic hg19 LIHC TCGA-G3-A7M9-01A 8 3 In-Frame Inter-chr q22.1 Seq+ 70997 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REPS2-APOO REPS2 chrX 16965257 - APOO chrX 23899069 - Exonic hg19 ACC TCGA-OR-A5KV-01A 3 4 In-Frame Intra-chr p22.2 p22.11 Seq+ 70998 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REPS2-GATAD2B REPS2 chrX 16965257 - GATAD2B chr1 153800824 - Exonic hg19 SARC TCGA-DX-A1KY-01A 2 1 CDS-5'UTR Inter-chr p22.2 Transcription factor 70999 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REPS2-GLRA2 REPS2 chrX 17121902 - GLRA2 chrX 14708832 + Exonic hg19 SARC TCGA-X6-A8C6-01A 6 10 In-Frame Intra-chr p22.2 p22.2 Seq+ 71000 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REPS2-SMARCA1 REPS2 chrX 17047746 - SMARCA1 chrX 128615162 - Exonic hg19 PRAD TCGA-HC-7232-01A 4 5 In-Frame Intra-chr p22.2 q26.1 Seq+ 71001 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REPS2-TXLNG REPS2 chrX 17047746 - TXLNG chrX 16859551 + Exonic hg19 COAD TCGA-AZ-4614-01A 6 4 In-Frame Intra-chr p22.2 p22.2 Seq+ 71002 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REPS2-TXLNG REPS2 chrX 17121902 - TXLNG chrX 16836697 + Exonic hg19 LIHC TCGA-BC-A10T-01A 3 2 In-Frame Intra-chr p22.2 p22.2 Seq+ 71003 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REPS2-TXLNG REPS2 chrX 17024467 - TXLNG chrX 16836697 + Exonic hg19 ACC TCGA-OR-A5LO-01A 2 3 Out-of-frame Intra-chr p22.2 p22.2 Seq+ 71004 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REPS2-TXLNG REPS2 chrX 16965257 - TXLNG chrX 16836697 + Exonic hg19 PRAD TCGA-VP-A87H-01A 6 3 In-Frame Intra-chr p22.2 p22.2 Seq+ 71005 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REPS2-TXLNG REPS2 chrX 17152030 - TXLNG chrX 16852406 + Exonic hg19 PRAD TCGA-XJ-A9DX-01A 18 14 In-Frame Intra-chr p22.2 p22.2 Seq+ 71006 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RER1-DDX21 RER1 chr1 2335188 - DDX21 chr10 70723858 + Exonic hg19 STAD TCGA-BR-8679-01A 2 3 Out-of-frame Inter-chr p36.32 q22.1 71007 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RERE-CYP4A11 RERE chr1 8525985 - CYP4A11 chr1 47403809 - Exonic hg19 BRCA TCGA-D8-A1XZ-01A 5 3 In-Frame Intra-chr p36.23 p33 Seq+ 71008 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RERE-ENO1 RERE chr1 8525985 - ENO1 chr1 8934976 - Exonic hg19 LUAD TCGA-55-A48Y-01A 12 25 CDS-5'UTR Intra-chr p36.23 p36.23 Seq+ 71009 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RERE-GPR157 RERE chr1 8482787 - GPR157 chr1 9171548 - Exonic hg19 LUAD TCGA-55-7574-01A 20 7 Out-of-frame Intra-chr p36.23 p36.22 Seq+ 71010 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RERE-GPR157 RERE chr1 8716032 - GPR157 chr1 9171548 - Exonic hg19 BRCA TCGA-D8-A140-01A 7 8 Out-of-frame Intra-chr p36.23 p36.22 Seq+ 71011 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RERE-OOEP RERE chr1 8482787 - OOEP chr6 74079108 - Exonic hg19 PRAD TCGA-G9-7522-01A 33 15 Out-of-frame Inter-chr p36.23 q13 Seq+ 71012 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RERE-SLC2A5 RERE chr1 8877219 - SLC2A5 chr1 9129653 - Exonic hg19 LUAD TCGA-55-7576-01A 3 2 5'UTR-5'UTR Intra-chr p36.23 p36.23 Seq+ 71013 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RERE-SLC2A5 RERE chr1 8555123 - SLC2A5 chr1 9118309 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 45 38 In-Frame Intra-chr p36.23 p36.23 Seq+ 71014 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RERE-SLC2A5 RERE chr1 8877219 - SLC2A5 chr1 9107793 - Exonic hg19 LIHC TCGA-DD-A73F-01A 7 3 5'UTR-CDS Intra-chr p36.23 p36.23 Seq+ 71015 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RERE-SLC2A7 RERE chr1 8716032 - SLC2A7 chr1 9079392 - Exonic hg19 UCEC TCGA-PG-A5BC-01A 10 6 Out-of-frame Intra-chr p36.23 p36.23 Seq+ 71016 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RERE-TPM3 RERE chr1 8674620 - TPM3 chr1 154148724 - Exonic hg19 STAD TCGA-RD-A8MW-01A 5 45 In-Frame Intra-chr p36.23 q21.3 Seq+ 71017 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RERE-VAMP3 RERE chr1 8482787 - VAMP3 chr1 7833502 + Exonic hg19 LGG TCGA-DU-8166-01A 13 14 Out-of-frame Intra-chr p36.23 p36.23 Seq+ 71018 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RERE-ZNF345 RERE chr1 8482787 - ZNF345 chr19 37367687 + Exonic hg19 PRAD TCGA-2A-A8VT-01A 4 6 5'UTR-5'UTR Inter-chr p36.23 q13.12 Transcription factor Seq+ 71019 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RERE-ZNF692 RERE chr1 8525985 - ZNF692 chr1 249152520 - Exonic hg19 LGG TCGA-DB-A64O-01A 4 1 In-Frame Intra-chr p36.23 q44 Transcription factor 71020 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RERE-ZSWIM5 RERE chr1 8525985 - ZSWIM5 chr1 45553909 - Exonic hg19 BRCA TCGA-D8-A1XZ-01A 5 1 Out-of-frame Intra-chr p36.23 p34.1 Seq+ 71021 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RET-ANK3 RET chr10 43604678 - ANK3 chr10 61789584 - Exonic hg19 THCA TCGA-E8-A44M-01A 6 4 CDS-3'UTR Intra-chr q11.21 TK:Ret Oncogene q21.2 71022 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RET-CCDC6 RET chr10 43610184 - CCDC6 chr10 61612460 - Exonic hg19 THCA TCGA-DJ-A4V5-01A 3 1 In-Frame Intra-chr q11.21 TK:Ret Oncogene q21.2 KB Pub Seq+ 71023 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RET-NCOA4 RET chr10 43610184 - NCOA4 chr10 51584616 + Exonic hg19 THCA TCGA-CE-A482-01A 9 3 In-Frame Intra-chr q11.21 TK:Ret Oncogene q11.22 Oncogene Tumor suppressor gene KB Pub Seq+ 71024 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REV1-AFF3 REV1 chr2 100065798 - AFF3 chr2 100185377 - Exonic hg19 PAAD TCGA-HZ-8637-01A 5 6 In-Frame Intra-chr q11.2 q11.2 Oncogene Seq+ 71025 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REV1-TMEM131 REV1 chr2 100106279 - TMEM131 chr2 98392481 - Exonic hg19 HNSC TCGA-CV-A45R-01A 5 5 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 71026 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REV3L-ARHGEF25 REV3L chr6 111803953 - ARHGEF25 chr12 58008472 + Exonic hg19 BRCA TCGA-EW-A6SD-01A 4 1 Out-of-frame Inter-chr q21 q13.3 Seq+ 71027 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REV3L-FN3KRP REV3L chr6 111628564 - FN3KRP chr17 80684356 + Exonic hg19 LGG TCGA-CS-4942-01A 14 4 In-Frame Inter-chr q21 q25.3 Seq+ 71028 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REV3L-FYN REV3L chr6 111702528 - FYN chr6 112101838 - Exonic hg19 BRCA TCGA-A2-A0D2-01A 10 6 CDS-5'UTR Intra-chr q21 q21 TK:Src Seq+ 71029 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REV3L-FYN REV3L chr6 111732683 - FYN chr6 112101838 - Exonic hg19 UCEC TCGA-B5-A3S1-01A 7 7 CDS-5'UTR Intra-chr q21 q21 TK:Src Seq+ 71030 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REV3L-FYN REV3L chr6 111803953 - FYN chr6 112041265 - Exonic hg19 SKCM TCGA-D9-A4Z3-01A 2 2 CDS-5'UTR Intra-chr q21 q21 TK:Src Seq+ 71031 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REV3L-FYN REV3L chr6 111803953 - FYN chr6 112101838 - Exonic hg19 UCS TCGA-N5-A4R8-01A 33 12 CDS-5'UTR Intra-chr q21 q21 TK:Src Seq+ 71032 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REV3L-FYN REV3L chr6 111803953 - FYN chr6 112041265 - Exonic hg19 UCEC TCGA-PG-A914-01A 21 11 CDS-5'UTR Intra-chr q21 q21 TK:Src Seq+ 71033 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REV3L-LAMA4 REV3L chr6 111803953 - LAMA4 chr6 112466135 - Exonic hg19 PRAD TCGA-KK-A8ID-01A 5 2 In-Frame Intra-chr q21 q21 Seq+ 71034 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REV3L-SOBP REV3L chr6 111726673 - SOBP chr6 107854663 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 6 12 In-Frame Intra-chr q21 q21 Seq+ 71035 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REV3L-TMEM117 REV3L chr6 111643772 - TMEM117 chr12 44238427 + Exonic hg19 SARC TCGA-DX-A1L4-01A 7 4 CDS-5'UTR Inter-chr q21 q12 Seq+ 71036 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REV3L-TRAF3IP2 REV3L chr6 111803953 - TRAF3IP2 chr6 111897024 - Exonic hg19 SARC TCGA-DX-A1L0-01A 33 12 Out-of-frame Intra-chr q21 q21 Seq+ 71037 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq REV3L-TRAF3IP2 REV3L chr6 111714079 - TRAF3IP2 chr6 111913297 - Exonic hg19 UCEC TCGA-PG-A5BC-01A 23 10 CDS-5'UTR Intra-chr q21 q21 Seq+ 71038 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFC1-C4orf34 RFC1 chr4 39367859 - C4orf34 chr4 39574083 - Exonic hg19 UVM TCGA-V4-A9EX-01A 18 10 In-Frame Intra-chr p14 71039 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFC1-CORIN RFC1 chr4 39343965 - CORIN chr4 47680071 - Exonic hg19 LIHC TCGA-CC-A9FU-01A 34 23 In-Frame Intra-chr p14 p12 Seq+ 71040 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFC1-EHBP1 RFC1 chr4 39343965 - EHBP1 chr2 63169853 + Exonic hg19 CESC TCGA-VS-A8EC-01A 4 4 Out-of-frame Inter-chr p14 p15 Seq+ 71041 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFC1-PDS5A RFC1 chr4 39328183 - PDS5A chr4 39827108 - Exonic hg19 DLBC TCGA-GS-A9TV-01A 87 121 Out-of-frame Intra-chr p14 p14 Seq+ 71042 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFC4-EHHADH RFC4 chr3 186510593 - EHHADH chr3 184966305 - Exonic hg19 STAD TCGA-CG-4306-01A 13 10 In-Frame Intra-chr q27.3 q27.2 71043 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFFL-ADAM32 RFFL chr17 33390595 - ADAM32 chr8 39004649 + Exonic hg19 LIHC TCGA-BC-4072-01B 17 8 5'UTR-CDS Inter-chr q12 Seq+ 71044 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFFL-NLK RFFL chr17 33416124 - NLK chr17 26495474 + Exonic hg19 BRCA TCGA-3C-AALK-01A 17 15 3'UTR-CDS Intra-chr q12 q11.2 CMGC:MAPK Seq+ 71045 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFFL-PEX12 RFFL chr17 33416124 - PEX12 chr17 33904610 - Exonic hg19 BRCA TCGA-AR-A1AT-01A 3 1 3'UTR-CDS Intra-chr q12 q12 71046 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFFL-RAD51D RFFL chr17 33416124 - RAD51D chr17 33430563 - Exonic hg19 BLCA TCGA-K4-A83P-01A 9 3 3'UTR-3'UTR Intra-chr q12 q12 71047 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFT1-TKT RFT1 chr3 53159925 - TKT chr3 53276258 - Exonic hg19 UCEC TCGA-B5-A5OD-01A 76 73 In-Frame Intra-chr p21.1 p21.1 Tumor suppressor gene Seq+ 71048 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFTN1-DAZL RFTN1 chr3 16450882 - DAZL chr3 16640105 - Exonic hg19 LUAD TCGA-55-6972-01A 11 5 In-Frame Intra-chr p24.3 p24.3 Seq+ 71049 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFTN1-DAZL RFTN1 chr3 16399439 - DAZL chr3 16640105 - Exonic hg19 BRCA TCGA-BH-A0B9-01A 16 2 In-Frame Intra-chr p24.3 p24.3 Seq+ 71050 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFTN1-DAZL RFTN1 chr3 16450882 - DAZL chr3 16636090 - Exonic hg19 BRCA TCGA-BH-A0BZ-01A 3 2 In-Frame Intra-chr p24.3 p24.3 Seq+ 71051 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFTN1-TMEM40 RFTN1 chr3 16554949 - TMEM40 chr3 12791339 - Exonic hg19 BLCA TCGA-E7-A7DV-01A 36 28 5'UTR-5'UTR Intra-chr p24.3 p25.2 Seq+ 71052 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFTN1-ZNF438 RFTN1 chr3 16535232 - ZNF438 chr10 31230580 - Exonic hg19 LIHC TCGA-HP-A5N0-01A 2 1 CDS-5'UTR Inter-chr p24.3 p11.23 Transcription factor 71053 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFWD2-GRM1 RFWD2 chr1 176153769 - GRM1 chr6 146673386 + Exonic hg19 SARC TCGA-DX-A6BH-01A 20 16 Out-of-frame Inter-chr q25.2 Tumor suppressor gene q24.3 Seq+ 71054 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFWD2-KIF14 RFWD2 chr1 176118142 - KIF14 chr1 200578056 - Exonic hg19 BRCA TCGA-BH-A203-01A 169 85 In-Frame Intra-chr q25.2 Tumor suppressor gene q32.1 Seq+ 71055 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFWD2-LRRC52 RFWD2 chr1 176132005 - LRRC52 chr1 165532742 + Exonic hg19 STAD TCGA-HU-A4H5-01A 5 9 Out-of-frame Intra-chr q25.2 Tumor suppressor gene q24.1 Seq+ 71056 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFWD2-MSH4 RFWD2 chr1 176118142 - MSH4 chr1 76378381 + Exonic hg19 PRAD TCGA-YL-A8SF-01A 4 2 In-Frame Intra-chr q25.2 Tumor suppressor gene p31.1 Seq+ 71057 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFWD2-SRGAP2 RFWD2 chr1 176175708 - SRGAP2 chr1 206631969 + Exonic hg19 BRCA TCGA-AN-A0XW-01A 7 15 In-Frame Intra-chr q25.2 Tumor suppressor gene q32.1 Tumor suppressor gene Seq+ 71058 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFWD2-XPR1 RFWD2 chr1 176175708 - XPR1 chr1 180849212 + Exonic hg19 BRCA TCGA-A8-A07W-01A 3 4 In-Frame Intra-chr q25.2 Tumor suppressor gene q25.3 Seq+ 71059 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFWD3-STK31 RFWD3 chr16 74694830 - STK31 chr7 23757100 + Exonic hg19 LUAD TCGA-44-5645-01A 2 1 Out-of-frame Inter-chr q23.1 p15.3 Seq+ 71060 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFX1-CCDC107 RFX1 chr19 14104337 - CCDC107 chr9 35658573 + Exonic hg19 OV TCGA-13-0801-01A 12 17 In-Frame Inter-chr p13.12 Transcription factor p13.3 Seq+ 71061 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFX1-TBC1D10A RFX1 chr19 14116915 - TBC1D10A chr22 30700619 - Exonic hg19 UCEC TCGA-PG-A915-01A 9 2 5'UTR-CDS Inter-chr p13.12 Transcription factor q12.2 71062 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFX2-ACTL8 RFX2 chr19 6110404 - ACTL8 chr1 18149480 + Exonic hg19 CESC TCGA-VS-A953-01A 2 1 5'UTR-5'UTR Inter-chr p13.3 Transcription factor p36.13 71063 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFX2-EPOR RFX2 chr19 6110404 - EPOR chr19 11489454 - Exonic hg19 LUAD TCGA-50-5946-01A 26 13 5'UTR-CDS Intra-chr p13.3 Transcription factor p13.2 Seq+ 71064 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFX2-MLLT1 RFX2 chr19 6110404 - MLLT1 chr19 6230724 - Exonic hg19 ESCA TCGA-Z6-A8JD-01A 7 42 5'UTR-CDS Intra-chr p13.3 Transcription factor p13.3 Seq+ 71065 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFX3-ARID4B RFX3 chr9 3525747 - ARID4B chr1 235359430 - Exonic hg19 SKCM TCGA-ER-A197-06A 4 2 5'UTR-CDS Inter-chr p24.2 Transcription factor q42.3 Seq+ 71066 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFX3-C9orf46 RFX3 chr9 3395472 - C9orf46 chr9 5361888 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 21 25 Out-of-frame Intra-chr p24.2 Transcription factor 71067 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFX3-DDAH2 RFX3 chr9 3525747 - DDAH2 chr6 31696522 - Exonic hg19 CESC TCGA-VS-A9UT-01A 21 24 5'UTR-CDS Inter-chr p24.2 Transcription factor Seq+ 71068 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFX3-GLDC RFX3 chr9 3525747 - GLDC chr9 6565429 - Exonic hg19 BRCA TCGA-EW-A3U0-01A 20 44 5'UTR-CDS Intra-chr p24.2 Transcription factor p24.1 Seq+ 71069 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFX3-RELB RFX3 chr9 3395472 - RELB chr19 45528587 + Exonic hg19 BRCA TCGA-AO-A03O-01A 2 5 Out-of-frame Inter-chr p24.2 Transcription factor q13.32 Transcription factor Seq+ 71070 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFX3-SMARCA2 RFX3 chr9 3525747 - SMARCA2 chr9 2070418 + Exonic hg19 BRCA TCGA-AN-A049-01A 2 1 5'UTR-CDS Intra-chr p24.2 Transcription factor p24.3 Tumor suppressor gene 71071 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFX3-TFDP1 RFX3 chr9 3525747 - TFDP1 chr13 114265311 + Exonic hg19 COAD TCGA-D5-6536-01A 14 12 5'UTR-5'UTR Inter-chr p24.2 Transcription factor q34 Transcription factor Seq+ 71072 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFX7-LIPC RFX7 chr15 56471468 - LIPC chr15 58830532 + Exonic hg19 BLCA TCGA-C4-A0F7-01A 41 24 Out-of-frame Intra-chr q21.3 Transcription factor q21.3 Seq+ 71073 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFX7-PCSK6 RFX7 chr15 56535323 - PCSK6 chr15 101872236 - Exonic hg19 SARC TCGA-X6-A8C3-01A 4 2 Out-of-frame Intra-chr q21.3 Transcription factor q26.3 71074 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFXANK-SUGP1 RFXANK chr19 19310043 - SUGP1 chr19 19391100 - Exonic hg19 UCEC TCGA-AJ-A3NH-01A 181 84 In-Frame Intra-chr p13.11 p13.11 Seq+ 71075 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RFXAP-SMAD9 RFXAP chr13 37394094 - SMAD9 chr13 37454012 - Exonic hg19 DLBC TCGA-VB-A8QN-01A 3 1 CDS-5'UTR Intra-chr q13.3 q13.3 Transcription factor 71076 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RG9MTD1-CAMK4 RG9MTD1 chr3 101280847 - CAMK4 chr5 110679722 + Exonic hg19 ESCA TCGA-LN-A5U7-01A 4 5 5'UTR-CDS Inter-chr q22.1 Seq+ 71077 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RG9MTD3-AR RG9MTD3 chr9 37776402 - AR chrX 66905852 + Exonic hg19 BRCA TCGA-A8-A08I-01A 7 3 In-Frame Inter-chr q12 Oncogene Tumor suppressor gene Transcription factor 71078 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RGL1-HMCN1 RGL1 chr1 183775619 - HMCN1 chr1 185815158 + Exonic hg19 SKCM TCGA-BF-A1Q0-01A 5 18 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 71079 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RGL1-NMNAT2 RGL1 chr1 183605636 - NMNAT2 chr1 183247764 - Exonic hg19 SARC TCGA-DX-AB2V-01A 23 22 5'UTR-CDS Intra-chr q25.3 q25.3 Seq+ 71080 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RGL1-POU2F1 RGL1 chr1 183775619 - POU2F1 chr1 167384737 + Exonic hg19 SARC TCGA-DX-AB3A-01A 3 2 Out-of-frame Intra-chr q25.3 q24.2 Transcription factor Seq+ 71081 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RGL1-RASAL2 RGL1 chr1 183854072 - RASAL2 chr1 178252699 + Exonic hg19 LIHC TCGA-2Y-A9HA-01A 3 1 Out-of-frame Intra-chr q25.3 q25.2 Tumor suppressor gene 71082 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RGL2-DAXX RGL2 chr6 33266232 - DAXX chr6 33291807 - Exonic hg19 UCEC TCGA-EO-A3AS-01A 8 6 CDS-5'UTR Intra-chr Oncogene Seq+ 71083 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RGL3-ECSIT RGL3 chr19 11510531 - ECSIT chr19 11617243 - Exonic hg19 BRCA TCGA-A2-A0YM-01A 19 11 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 71084 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RGMA-ADAMTSL3 RGMA chr15 93632148 - ADAMTSL3 chr15 84581844 + Exonic hg19 LGG TCGA-TQ-A7RW-01A 3 5 In-Frame Intra-chr q26.1 q25.2 Seq+ 71085 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RGMA-RHCG RGMA chr15 93632148 - RHCG chr15 90026448 - Exonic hg19 LGG TCGA-HT-A614-01A 3 1 In-Frame Intra-chr q26.1 q26.1 71086 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RGMB-CCDC112 RGMB chr5 98109910 - CCDC112 chr5 114620605 - Exonic hg19 LGG TCGA-TQ-A7RM-01A 129 74 Out-of-frame Intra-chr q15 q22.3 Seq+ 71087 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RGS10-TIAL1 RGS10 chr10 121302102 - TIAL1 chr10 121347760 - Exonic hg19 LUSC TCGA-98-8023-01A 7 2 Out-of-frame Intra-chr q26.11 q26.11 71088 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RGS12-PDZRN3 RGS12 chr4 3319778 - PDZRN3 chr3 73657835 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 5 3 In-Frame Inter-chr p16.3 p13 Seq+ 71089 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RGS12-USP2 RGS12 chr4 3344780 - USP2 chr11 119230944 - Exonic hg19 BRCA TCGA-D8-A1XO-01A 6 1 In-Frame Inter-chr p16.3 q23.3 71090 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RGS17-LAMA2 RGS17 chr6 153452259 - LAMA2 chr6 129371063 + Exonic hg19 SKCM TCGA-D3-A3CC-06A 6 2 5'UTR-CDS Intra-chr q25.2 q22.33 Seq+ 71091 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RGS17-PDLIM5 RGS17 chr6 153365035 - PDLIM5 chr4 95583573 + Exonic hg19 SARC TCGA-DX-A6YQ-01A 28 13 Out-of-frame Inter-chr q25.2 q22.3 Seq+ 71092 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RGS20-MCPH1 RGS20 chr8 54793644 - MCPH1 chr8 6335115 + Exonic hg19 SKCM TCGA-EB-A82B-01A 21 26 In-Frame Intra-chr q11.23 p23.1 Tumor suppressor gene Seq+ 71093 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RGS3-ABCA1 RGS3 chr9 116226161 - ABCA1 chr9 107602800 - Exonic hg19 PRAD TCGA-XQ-A8TA-01A 41 32 Out-of-frame Intra-chr q32 q31.1 Seq+ 71094 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RGS3-BSPRY RGS3 chr9 116226161 - BSPRY chr9 116130539 + Exonic hg19 LUAD TCGA-05-4427-01A 5 3 Out-of-frame Intra-chr q32 q32 Seq+ 71095 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RGS3-BSPRY RGS3 chr9 116346707 - BSPRY chr9 116116520 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 19 5 In-Frame Intra-chr q32 q32 Seq+ 71096 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RGS3-MIER3 RGS3 chr9 116299198 - MIER3 chr5 56224688 - Exonic hg19 BRCA TCGA-D8-A27R-01A 2 2 Out-of-frame Inter-chr q32 q11.2 71097 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RGS4-SERPINF2 RGS4 chr1 163039318 - SERPINF2 chr17 1648286 + Exonic hg19 PCPG TCGA-WB-A81S-01A 7 3 5'UTR-5'UTR Inter-chr q23.3 p13.3 Seq+ 71098 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RGS6-NPAS3 RGS6 chr14 72976987 - NPAS3 chr14 34145417 + Exonic hg19 LGG TCGA-DU-7006-01A 10 5 Out-of-frame Intra-chr q24.2 q13.1 Transcription factor Seq+ 71099 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RGS7-C8orf34 RGS7 chr1 241518999 - C8orf34 chr8 69380927 + Exonic hg19 LGG TCGA-FG-6689-01A 2 2 Out-of-frame Inter-chr q43 q13.2 71100 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RHBDD1-EFR3A RHBDD1 chr2 227779067 - EFR3A chr8 132952746 + Exonic hg19 PRAD TCGA-CH-5751-01A 2 1 In-Frame Inter-chr q36.3 q24.22 71101 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RHCG-C7 RHCG chr15 90014642 - C7 chr5 40954982 + Exonic hg19 KICH TCGA-KL-8325-01A 2 56 Out-of-frame Inter-chr q26.1 p13.1 Tumor suppressor gene 71102 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RHOA-C3orf43 RHOA chr3 49449253 - C3orf43 chr3 196236540 - Exonic hg19 BRCA TCGA-EW-A6SB-01A 29 22 5'UTR-CDS Intra-chr p21.31 Oncogene Tumor suppressor gene Seq+ 71103 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RHOA-CACNA2D2 RHOA chr3 49449253 - CACNA2D2 chr3 50431599 - Exonic hg19 BLCA TCGA-FD-A3SJ-01A 29 10 5'UTR-CDS Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Seq+ 71104 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RHOA-NICN1 RHOA chr3 49449253 - NICN1 chr3 49463861 - Exonic hg19 KIRC TCGA-A3-3387-01A 38 25 5'UTR-CDS Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Seq+ 71105 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RHOA-TMEM111 RHOA chr3 49405861 - TMEM111 chr3 10011485 - Exonic hg19 READ TCGA-EI-6510-01A 400 355 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene Seq+ 71106 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RHOB-ANXA1 RHOB chr2 20649200 - ANXA1 chr9 75772570 + Exonic hg19 PRAD TCGA-EJ-7330-01A 2 3 Out-of-frame Inter-chr p24.1 Tumor suppressor gene q21.13 Tumor suppressor gene 71107 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RHOB-EIF2AK2 RHOB chr2 20649200 - EIF2AK2 chr2 37342384 - Exonic hg19 KIRC TCGA-B4-5378-01A 2 3 Out-of-frame Intra-chr p24.1 Tumor suppressor gene p22.2 71108 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RHOBTB1-ATP6V1C2 RHOBTB1 chr10 62701562 - ATP6V1C2 chr2 10908845 + Exonic hg19 BRCA TCGA-C8-A134-01A 8 8 5'UTR-CDS Inter-chr q21.2 p25.1 Seq+ 71109 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RHOBTB2-PNOC RHOBTB2 chr8 22868201 - PNOC chr8 28196557 + Exonic hg19 BRCA TCGA-A8-A09R-01A 2 2 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.1 71110 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RHOC-DDX21 RHOC chr1 113243755 - DDX21 chr10 70723858 + Exonic hg19 BLCA TCGA-K4-A5RH-01A 2 30 Out-of-frame Inter-chr p13.2 q22.1 71111 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RHOH-N4BP2 RHOH chr4 40198920 - N4BP2 chr4 40098847 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 29 34 5'UTR-5'UTR Intra-chr p14 Oncogene p14 Seq+ 71112 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RHOJ-C6orf52 RHOJ chr14 63671765 - C6orf52 chr6 10671831 - Exonic hg19 GBM TCGA-27-1835-01A 13 3 In-Frame Inter-chr q23.2 p24.2 Seq+ 71113 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RHOT1-CA10 RHOT1 chr17 30469748 - CA10 chr17 50149753 - Exonic hg19 BRCA TCGA-BH-A18U-01A 3 3 In-Frame Intra-chr q11.2 q22 71114 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RHOT1-FGFR1 RHOT1 chr17 30469748 - FGFR1 chr8 38315052 - Exonic hg19 BRCA TCGA-BH-A18U-01A 5 4 Out-of-frame Inter-chr q11.2 p11.23 TK:FGFR Oncogene Seq+ 71115 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RHOT1-LRRC37B RHOT1 chr17 30469748 - LRRC37B chr17 30374780 + Exonic hg19 LUAD TCGA-93-8067-01A 3 8 In-Frame Intra-chr q11.2 q11.2 Seq+ 71116 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RHOT2-DPEP1 RHOT2 chr16 723130 - DPEP1 chr16 89704040 + Exonic hg19 UCS TCGA-N5-A4RT-01A 48 8 Out-of-frame Intra-chr p13.3 q24.3 Seq+ 71117 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RHPN2-BLVRB RHPN2 chr19 33512477 - BLVRB chr19 40957399 - Exonic hg19 BRCA TCGA-A2-A4S1-01A 4 8 Out-of-frame Intra-chr q13.11 q13.2 Seq+ 71118 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RHPN2-BRSK1 RHPN2 chr19 33555690 - BRSK1 chr19 55798375 + Exonic hg19 ESCA TCGA-L5-A4OQ-01A 7 13 Out-of-frame Intra-chr q13.11 q13.42 CAMK:CAMKL Tumor suppressor gene Seq+ 71119 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RHPN2-GRIN2D RHPN2 chr19 33481420 - GRIN2D chr19 48919259 + Exonic hg19 OV TCGA-24-1544-01A 9 5 In-Frame Intra-chr q13.11 q13.33 Seq+ 71120 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RHPN2-PEPD RHPN2 chr19 33481420 - PEPD chr19 33984243 - Exonic hg19 STAD TCGA-CD-A4MH-01A 7 64 In-Frame Intra-chr q13.11 q13.11 Seq+ 71121 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RHPN2-PEPD RHPN2 chr19 33535155 - PEPD chr19 33904549 - Exonic hg19 BLCA TCGA-GV-A3QF-01A 74 59 In-Frame Intra-chr q13.11 q13.11 Seq+ 71122 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RHPN2-SLC7A10 RHPN2 chr19 33535155 - SLC7A10 chr19 33703908 - Exonic hg19 LIHC TCGA-DD-A4NA-01A 724 409 In-Frame Intra-chr q13.11 q13.11 Seq+ 71123 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RHPN2-VSTM2B RHPN2 chr19 33555690 - VSTM2B chr19 30054753 + Exonic hg19 LUAD TCGA-55-8301-01A 13 6 Out-of-frame Intra-chr q13.11 q12 Seq+ 71124 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RIC8B-C11orf84 RIC8B chr12 107219598 - C11orf84 chr11 63585277 + Exonic hg19 BRCA TCGA-AN-A0AL-01A 6 2 Out-of-frame Inter-chr q23.3 q13.1 71125 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RIC8B-ORAI1 RIC8B chr12 107219598 - ORAI1 chr12 122078947 + Exonic hg19 KIRP TCGA-A4-A5Y1-01A 2 2 Out-of-frame Intra-chr q23.3 q24.31 71126 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RIC8B-RFX4 RIC8B chr12 107245372 - RFX4 chr12 107033110 + Exonic hg19 BRCA TCGA-A7-A26G-01A 5 6 In-Frame Intra-chr q23.3 q23.3 Transcription factor Seq+ 71127 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RIC8B-RFX4 RIC8B chr12 107177822 - RFX4 chr12 107141215 + Exonic hg19 MESO TCGA-SC-A6LM-01A 15 6 Out-of-frame Intra-chr q23.3 q23.3 Transcription factor Seq+ 71128 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RICTOR-ANKRD31 RICTOR chr5 39074213 - ANKRD31 chr5 74380199 - Exonic hg19 ACC TCGA-OR-A5J1-01A 3 1 Out-of-frame Intra-chr p13.1 q13.3 71129 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RICTOR-C9 RICTOR chr5 39074213 - C9 chr5 39342298 - Exonic hg19 ESCA TCGA-L5-A8NE-01A 5 11 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 71130 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RICTOR-DTNBP1 RICTOR chr5 39074213 - DTNBP1 chr6 15593312 - Exonic hg19 LUAD TCGA-55-8507-01A 20 12 Out-of-frame Inter-chr p13.1 p22.3 Seq+ 71131 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RICTOR-FYB RICTOR chr5 39074213 - FYB chr5 39141243 - Exonic hg19 LUSC TCGA-18-3419-01A 9 5 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 71132 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RICTOR-FYB RICTOR chr5 39021141 - FYB chr5 39110491 - Exonic hg19 LUAD TCGA-44-7660-01A 7 5 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 71133 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RICTOR-HCN1 RICTOR chr5 39074213 - HCN1 chr5 45645710 - Exonic hg19 BLCA TCGA-CF-A1HS-01A 6 3 Out-of-frame Intra-chr p13.1 p12 Seq+ 71134 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RICTOR-ISL1 RICTOR chr5 39074213 - ISL1 chr5 50680375 + Exonic hg19 COAD TCGA-CA-5254-01A 6 2 In-Frame Intra-chr p13.1 q11.1 Transcription factor Seq+ 71135 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RICTOR-LHFP RICTOR chr5 38966743 - LHFP chr13 39952663 - Exonic hg19 SKCM TCGA-EE-A184-06A 3 3 Out-of-frame Inter-chr p13.1 q14.11 Seq+ 71136 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RICTOR-MINPP1 RICTOR chr5 38991051 - MINPP1 chr10 89311839 + Exonic hg19 KIRP TCGA-DW-7841-01A 6 6 In-Frame Inter-chr p13.1 q23.2 Seq+ 71137 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RICTOR-NUP155 RICTOR chr5 39074213 - NUP155 chr5 37299670 - Exonic hg19 KIRP TCGA-HE-7130-01A 4 2 Out-of-frame Intra-chr p13.1 p13.2 Seq+ 71138 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RICTOR-RANBP3L RICTOR chr5 39074213 - RANBP3L chr5 36271413 - Exonic hg19 BRCA TCGA-D8-A13Z-01A 9 1 In-Frame Intra-chr p13.1 p13.2 Seq+ 71139 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RIF1-PDE11A RIF1 chr2 152318980 - PDE11A chr2 178592900 - Exonic hg19 UCEC TCGA-AJ-A3NF-01A 8 5 In-Frame Intra-chr q23.3 q31.2 Seq+ 71140 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RIF1-TNFAIP6 RIF1 chr2 152326378 - TNFAIP6 chr2 152220457 + Exonic hg19 SARC TCGA-X6-A8C2-01A 2 3 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 71141 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RILPL1-SARNP RILPL1 chr12 123968727 - SARNP chr12 56151337 - Exonic hg19 BRCA TCGA-A8-A0A4-01A 8 5 Out-of-frame Intra-chr q24.31 q13.2 Seq+ 71142 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RIMBP2-CCDC41 RIMBP2 chr12 131112867 - CCDC41 chr12 94806367 - Exonic hg19 BRCA TCGA-A8-A09D-01A 12 12 5'UTR-5'UTR Intra-chr q24.33 71143 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RIMKLB-ELP3 RIMKLB chr12 8866637 - ELP3 chr8 27954736 + Exonic hg19 SKCM TCGA-D3-A1Q1-06A 6 14 In-Frame Inter-chr p13.31 p21.1 Seq+ 71144 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RIMKLB-ITFG2 RIMKLB chr12 8853210 - ITFG2 chr12 2926389 + Exonic hg19 LGG TCGA-E1-5304-01A 15 6 5'UTR-CDS Intra-chr p13.31 p13.33 Seq+ 71145 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RIMKLB-PIP4K2A RIMKLB chr12 8850893 - PIP4K2A chr10 22898646 - Exonic hg19 LGG TCGA-FG-8185-01A 16 26 5'UTR-CDS Inter-chr p13.31 p12.2 Seq+ 71146 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RIMKLB-SETD8 RIMKLB chr12 8906689 - SETD8 chr12 123873980 + Exonic hg19 UCEC TCGA-B5-A5OE-01A 2 2 In-Frame Intra-chr p13.31 Seq+ 71147 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RIMS2-BAALC RIMS2 chr8 104513290 - BAALC chr8 104225147 + Exonic hg19 BRCA TCGA-A7-A3J0-01A 8 5 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 71148 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RIMS2-BAALC RIMS2 chr8 104513290 - BAALC chr8 104240217 + Exonic hg19 BRCA TCGA-BH-A18V-01A 10 10 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 71149 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RIMS2-BAALC RIMS2 chr8 104513290 - BAALC chr8 104225147 + Exonic hg19 BRCA TCGA-BH-A18V-06A 34 43 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 71150 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RIMS2-BAALC RIMS2 chr8 104513290 - BAALC chr8 104225147 + Exonic hg19 BLCA TCGA-GC-A3I6-01A 17 22 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 71151 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RIMS2-ODF1 RIMS2 chr8 104513290 - ODF1 chr8 103572680 + Exonic hg19 BRCA TCGA-E9-A22B-01A 50 53 In-Frame Intra-chr q22.3 q22.3 Seq+ 71152 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RIMS2-PTGIS RIMS2 chr8 105161076 - PTGIS chr20 48160985 - Exonic hg19 BRCA TCGA-A2-A3XW-01A 3 2 Out-of-frame Inter-chr q22.3 q13.13 71153 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RIMS4-AKAP10 RIMS4 chr20 43438816 - AKAP10 chr17 19871774 - Exonic hg19 OV TCGA-09-1667-01C 3 2 In-Frame Inter-chr q13.12 p11.2 Seq+ 71154 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RIN3-CCDC88C RIN3 chr14 93081824 - CCDC88C chr14 91826055 - Exonic hg19 LUSC TCGA-77-A5G6-01A 2 1 Out-of-frame Intra-chr q32.12 q32.12 71155 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RIOK1-EYS RIOK1 chr6 7414623 - EYS chr6 66006012 - Exonic hg19 CESC TCGA-EK-A2H0-01A 48 24 Out-of-frame Intra-chr p24.3 Atypical:RIO q12 Seq+ 71156 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RIOK1-EYS RIOK1 chr6 7414623 - EYS chr6 66006012 - Exonic hg19 CESC TCGA-ZJ-A8QQ-01A 16 11 Out-of-frame Intra-chr p24.3 Atypical:RIO q12 Seq+ 71157 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RIOK3-TAF4B RIOK3 chr18 21033466 - TAF4B chr18 23969809 + Exonic hg19 HNSC TCGA-CV-7101-01A 22 31 In-Frame Intra-chr q11.2 Atypical:RIO q11.2 Seq+ 71158 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RIPK1-NQO2 RIPK1 chr6 3089891 - NQO2 chr6 3006702 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 2 3 CDS-5'UTR Intra-chr p25.2 TKL:RIPK p25.2 71159 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RLF-GPATCH8 RLF chr1 40627308 - GPATCH8 chr17 42552271 - Exonic hg19 PRAD TCGA-EJ-7784-01A 10 13 In-Frame Inter-chr p34.2 Transcription factor q21.31 Seq+ 71160 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RLF-MFSD2A RLF chr1 40627308 - MFSD2A chr1 40424373 + Exonic hg19 OV TCGA-24-1557-01A 4 1 In-Frame Intra-chr p34.2 Transcription factor p34.2 Tumor suppressor gene Seq+ 71161 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RLF-RTN4RL1 RLF chr1 40627308 - RTN4RL1 chr17 1841102 - Exonic hg19 LIHC TCGA-BC-A10T-01A 2 4 Out-of-frame Inter-chr p34.2 Transcription factor p13.3 Seq+ 71162 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RLF-SFPQ RLF chr1 40627308 - SFPQ chr1 35657130 - Exonic hg19 BRCA TCGA-A2-A0CY-01A 12 6 In-Frame Intra-chr p34.2 Transcription factor p34.3 Seq+ 71163 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RMI1-LCN2 RMI1 chr9 86595806 - LCN2 chr9 130913917 + Exonic hg19 SARC TCGA-K1-A6RU-01A 32 3 5'UTR-CDS Intra-chr q21.32 q34.11 Seq+ 71164 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RMI1-STX17 RMI1 chr9 86595806 - STX17 chr9 102691060 + Exonic hg19 GBM TCGA-06-0744-01A 5 1 5'UTR-CDS Intra-chr q21.32 q31.1 Seq+ 71165 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RMI2-CLEC16A RMI2 chr16 11439623 - CLEC16A chr16 11214472 + Exonic hg19 UCS TCGA-N8-A56S-01A 7 7 In-Frame Intra-chr p13.13 p13.13 Seq+ 71166 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RMND1-MTHFD1L RMND1 chr6 151773151 - MTHFD1L chr6 151226786 + Exonic hg19 SARC TCGA-HB-A3YV-01A 296 179 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 71167 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RMND1-SYNE1 RMND1 chr6 151738414 - SYNE1 chr6 152632008 - Exonic hg19 UCS TCGA-N5-A4RD-01A 2 3 In-Frame Intra-chr q25.1 q25.2 Oncogene Seq+ 71168 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RMND1-TIAM2 RMND1 chr6 151742380 - TIAM2 chr6 155448624 + Exonic hg19 SARC TCGA-DX-A1L0-01A 4 1 CDS-5'UTR Intra-chr q25.1 q25.2 Seq+ 71169 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RMND1-ZDHHC14 RMND1 chr6 151738414 - ZDHHC14 chr6 158093756 + Exonic hg19 BRCA TCGA-E9-A1R7-01A 34 20 In-Frame Intra-chr q25.1 q25.3 Seq+ 71170 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNASE10-CD38 RNASE10 chr14 20974178 - CD38 chr4 15818134 + Exonic hg19 LUSC TCGA-56-5898-01A 2 2 5'UTR-CDS Inter-chr q11.2 p15.32 71171 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNASE10-CD38 RNASE10 chr14 20974178 - CD38 chr4 15818134 + Exonic hg19 HNSC TCGA-CN-4730-01A 2 2 5'UTR-CDS Inter-chr q11.2 p15.32 71172 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNASE10-CD38 RNASE10 chr14 20974178 - CD38 chr4 15818134 + Exonic hg19 HNSC TCGA-CN-4731-01A 2 1 5'UTR-CDS Inter-chr q11.2 p15.32 71173 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNASE10-CD38 RNASE10 chr14 20974178 - CD38 chr4 15818134 + Exonic hg19 HNSC TCGA-CN-5369-01A 2 1 5'UTR-CDS Inter-chr q11.2 p15.32 71174 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNASEH1-DYSF RNASEH1 chr2 3599734 - DYSF chr2 71871095 + Exonic hg19 SKCM TCGA-DA-A95Y-06A 10 2 Out-of-frame Intra-chr p25.3 p13.2 Seq+ 71175 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNASEH2A-BEST2 RNASEH2A chr19 12918320 - BEST2 chr19 12868465 + Exonic hg19 LUSC TCGA-63-5128-01A 41 14 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 71176 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNASEH2B-AGXT2 RNASEH2B chr13 51484276 - AGXT2 chr5 35014224 - Exonic hg19 SARC TCGA-HB-A3YV-01A 3 12 Out-of-frame Inter-chr q14.3 p13.2 Seq+ 71177 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF10-CCDC60 RNF10 chr12 120984404 - CCDC60 chr12 119866488 + Exonic hg19 LGG TCGA-S9-A6WL-01A 3 1 In-Frame Intra-chr q24.31 q24.23 71178 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF10-FBL RNF10 chr12 120972771 - FBL chr19 40325453 - Exonic hg19 PRAD TCGA-G9-6378-01A 48 21 Out-of-frame Inter-chr q24.31 Seq+ 71179 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF10-FBXO21 RNF10 chr12 120972771 - FBXO21 chr12 117615446 - Exonic hg19 LUAD TCGA-97-7937-01A 27 12 Out-of-frame Intra-chr q24.31 q24.22 Seq+ 71180 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF10-SYPL1 RNF10 chr12 120998689 - SYPL1 chr7 105739728 - Exonic hg19 BRCA TCGA-AC-A2FM-01A 50 31 In-Frame Inter-chr q24.31 q22.3 Seq+ 71181 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF11-C8A RNF11 chr1 51702551 - C8A chr1 57347118 + Exonic hg19 OV TCGA-04-1341-01A 30 42 Out-of-frame Intra-chr p32.3 p32.2 Seq+ 71182 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF11-TMEM61 RNF11 chr1 51702551 - TMEM61 chr1 55457509 + Exonic hg19 BRCA TCGA-BH-A1FC-01A 90 37 Out-of-frame Intra-chr p32.3 p32.3 Seq+ 71183 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF111-AQP9 RNF111 chr15 59280267 - AQP9 chr15 58458872 + Exonic hg19 BLCA TCGA-XF-AAML-01A 10 1 5'UTR-CDS Intra-chr q22.1 Tumor suppressor gene q21.3 71184 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF111-MAPKAP1 RNF111 chr15 59280267 - MAPKAP1 chr9 128348006 - Exonic hg19 MESO TCGA-SH-A9CU-01A 5 4 5'UTR-5'UTR Inter-chr q22.1 Tumor suppressor gene q33.3 Seq+ 71185 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF111-SLTM RNF111 chr15 59323901 - SLTM chr15 59209198 - Exonic hg19 CESC TCGA-C5-A3HE-01A 16 5 In-Frame Intra-chr q22.1 Tumor suppressor gene q22.1 Seq+ 71186 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF111-SLTM RNF111 chr15 59359282 - SLTM chr15 59193486 - Exonic hg19 BLCA TCGA-ZF-A9RN-01A 5 4 In-Frame Intra-chr q22.1 Tumor suppressor gene q22.1 Seq+ 71187 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF111-TCF12 RNF111 chr15 59359282 - TCF12 chr15 57383987 + Exonic hg19 BRCA TCGA-B6-A0RT-01A 5 2 In-Frame Intra-chr q22.1 Tumor suppressor gene q21.3 Oncogene Transcription factor 71188 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF111-TCF12 RNF111 chr15 59280267 - TCF12 chr15 57565228 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 2 1 5'UTR-CDS Intra-chr q22.1 Tumor suppressor gene q21.3 Oncogene Transcription factor 71189 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF111-TLN2 RNF111 chr15 59280267 - TLN2 chr15 63084840 + Exonic hg19 ESCA TCGA-2H-A9GQ-01A 4 13 5'UTR-CDS Intra-chr q22.1 Tumor suppressor gene q22.2 Seq+ 71190 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF115-PIAS3 RNF115 chr1 145611341 - PIAS3 chr1 145578062 + Exonic hg19 LUSC TCGA-77-7140-01A 3 3 In-Frame Intra-chr q21.1 q21.1 71191 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF115-PRPF3 RNF115 chr1 145682094 - PRPF3 chr1 150297353 + Exonic hg19 SKCM TCGA-GN-A26A-06A 2 2 CDS-5'UTR Intra-chr q21.1 q21.2 71192 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF121-ANO1 RNF121 chr11 71671937 - ANO1 chr11 69933858 + Exonic hg19 BRCA TCGA-A7-A26G-01A 2 2 In-Frame Intra-chr q13.4 q13.3 Seq+ 71193 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF121-ESRRG RNF121 chr11 71640170 - ESRRG chr1 217113015 - Exonic hg19 BRCA TCGA-A2-A3KC-01A 4 7 5'UTR-5'UTR Inter-chr q13.4 q41 Transcription factor Seq+ 71194 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF121-FADS2 RNF121 chr11 71671937 - FADS2 chr11 61624483 + Exonic hg19 BRCA TCGA-E9-A1N5-01A 36 33 In-Frame Intra-chr q13.4 q12.2 Seq+ 71195 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF121-MRPL21 RNF121 chr11 71671937 - MRPL21 chr11 68668073 - Exonic hg19 SKCM TCGA-D9-A3Z3-06A 11 5 Out-of-frame Intra-chr q13.4 q13.3 Seq+ 71196 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF121-PCDH9 RNF121 chr11 71671937 - PCDH9 chr13 66879160 - Exonic hg19 LUSC TCGA-70-6723-01A 32 11 Out-of-frame Inter-chr q13.4 q21.32 Tumor suppressor gene Seq+ 71197 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF121-PPP6R3 RNF121 chr11 71640170 - PPP6R3 chr11 68334482 + Exonic hg19 LUSC TCGA-85-A511-01A 5 5 In-Frame Intra-chr q13.4 q13.2 Seq+ 71198 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF121-PPP6R3 RNF121 chr11 71701763 - PPP6R3 chr11 68331771 + Exonic hg19 BRCA TCGA-A8-A0A9-01A 24 22 Out-of-frame Intra-chr q13.4 q13.2 Seq+ 71199 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF121-RP11-849H4.2 RNF121 chr11 71640170 - RP11-849H4.2 chr11 71634521 - Exonic hg19 PAAD TCGA-2J-AABF-01A 2 5 Out-of-frame Intra-chr q13.4 71200 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF121-SF1 RNF121 chr11 71640170 - SF1 chr11 64544098 - Exonic hg19 BRCA TCGA-E2-A576-01A 4 12 Out-of-frame Intra-chr q13.4 q13.1 Seq+ 71201 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF121-SLC22A8 RNF121 chr11 71671937 - SLC22A8 chr11 62763624 - Exonic hg19 LIHC TCGA-DD-AADY-01A 10 6 Out-of-frame Intra-chr q13.4 q12.3 Seq+ 71202 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF121-VASP RNF121 chr11 71668310 - VASP chr19 46020921 + Exonic hg19 PRAD TCGA-V1-A9OA-01A 12 4 In-Frame Inter-chr q13.4 q13.32 Seq+ 71203 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF121-VPS37C RNF121 chr11 71671937 - VPS37C chr11 60901679 - Exonic hg19 BRCA TCGA-A2-A1G4-01A 23 13 In-Frame Intra-chr q13.4 q12.2 Seq+ 71204 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF121-VWA5A RNF121 chr11 71640170 - VWA5A chr11 123988204 + Exonic hg19 LUAD TCGA-38-4632-01A 18 20 5'UTR-5'UTR Intra-chr q13.4 q24.2 Tumor suppressor gene Seq+ 71205 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF122-NEGR1 RNF122 chr8 33424217 - NEGR1 chr1 71873253 - Exonic hg19 BRCA TCGA-BH-A204-01A 43 18 In-Frame Inter-chr p12 p31.1 Seq+ 71206 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF126-ARHGAP35 RNF126 chr19 652826 - ARHGAP35 chr19 47440521 + Exonic hg19 PRAD TCGA-YL-A9WY-01A 2 3 Out-of-frame Intra-chr p13.3 q13.32 Transcription factor 71207 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF126-MED16 RNF126 chr19 663047 - MED16 chr19 891149 - Exonic hg19 LGG TCGA-FG-A710-01A 6 3 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 71208 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF126-PRSS57 RNF126 chr19 649679 - PRSS57 chr19 687188 - Exonic hg19 HNSC TCGA-CN-A6V6-01A 87 81 In-Frame Intra-chr p13.3 p13.3 Seq+ 71209 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF128-CXorf57 RNF128 chrX 105937638 - CXorf57 chrX 105891543 + Exonic hg19 LIHC TCGA-5C-AAPD-01A 2 1 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 71210 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF13-ATP8A2 RNF13 chr3 149570383 - ATP8A2 chr13 26273311 + Exonic hg19 BRCA TCGA-A7-A4SE-01A 3 4 In-Frame Inter-chr q25.1 q12.13 71211 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF13-TM4SF4 RNF13 chr3 149531140 - TM4SF4 chr3 149193610 + Exonic hg19 OV TCGA-13-1495-01A 2 3 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 71212 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF13-TM4SF4 RNF13 chr3 149531140 - TM4SF4 chr3 149216509 + Exonic hg19 BRCA TCGA-A7-A26G-01A 21 23 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 71213 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF13-TM4SF4 RNF13 chr3 149589941 - TM4SF4 chr3 149205406 + Exonic hg19 UCS TCGA-N5-A4RA-01A 34 26 In-Frame Intra-chr q25.1 q25.1 Seq+ 71214 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF130-HRH2 RNF130 chr5 179467453 - HRH2 chr5 175109712 + Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 38 37 CDS-5'UTR Intra-chr q35.3 q35.2 Seq+ 71215 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF130-RASGEF1C RNF130 chr5 179498456 - RASGEF1C chr5 179538580 - Exonic hg19 LUAD TCGA-49-4505-01A 7 7 Out-of-frame Intra-chr q35.3 q35.3 Seq+ 71216 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF138-RNF125 RNF138 chr18 29672849 - RNF125 chr18 29645865 + Exonic hg19 LUAD TCGA-86-8673-01A 3 3 Out-of-frame Intra-chr q12.1 q12.1 71217 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF138-RNF125 RNF138 chr18 29672849 - RNF125 chr18 29648261 + Exonic hg19 BRCA TCGA-C8-A1HN-01A 16 9 Out-of-frame Intra-chr q12.1 q12.1 71218 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF138-RNF125 RNF138 chr18 29672849 - RNF125 chr18 29648261 + Exonic hg19 THCA TCGA-CE-A484-01A 2 2 Out-of-frame Intra-chr q12.1 q12.1 71219 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF138-RNF125 RNF138 chr18 29672849 - RNF125 chr18 29648261 + Exonic hg19 CESC TCGA-LP-A4AX-01A 8 8 Out-of-frame Intra-chr q12.1 q12.1 71220 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF139-EIF2A RNF139 chr8 125487531 - EIF2A chr3 150270143 + Exonic hg19 LUAD TCGA-69-8254-01A 30 10 In-Frame Inter-chr q24.13 q25.1 Seq+ 71221 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF144A-MSH2 RNF144A chr2 7081278 - MSH2 chr2 47635540 + Exonic hg19 SKCM TCGA-DA-A95Y-06A 14 11 5'UTR-CDS Intra-chr p25.1 Tumor suppressor gene p21 Oncogene Tumor suppressor gene Seq+ 71222 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF144B-C6orf165 RNF144B chr6 18399930 - C6orf165 chr6 88173738 + Exonic hg19 LIHC TCGA-DD-AAE2-01A 21 33 In-Frame Intra-chr p22.3 Seq+ 71223 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF144B-KDM1B RNF144B chr6 18427916 - KDM1B chr6 18197288 + Exonic hg19 SKCM TCGA-ER-A3EV-06A 3 5 In-Frame Intra-chr p22.3 p22.3 Seq+ 71224 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF144B-LYRM4 RNF144B chr6 18399930 - LYRM4 chr6 5109725 - Exonic hg19 BRCA TCGA-A8-A0AD-01A 63 46 In-Frame Intra-chr p22.3 p25.1 Seq+ 71225 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF144B-PPP3CA RNF144B chr6 18399930 - PPP3CA chr4 102117273 - Exonic hg19 PRAD TCGA-HC-7209-01A 578 531 Out-of-frame Inter-chr p22.3 q24 Seq+ 71226 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF145-PDE4D RNF145 chr5 158596687 - PDE4D chr5 58511794 - Exonic hg19 SKCM TCGA-EE-A2M7-06A 11 9 In-Frame Intra-chr q33.3 q12.1 Seq+ 71227 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF152-PIGN RNF152 chr18 59560028 - PIGN chr18 59774318 - Exonic hg19 HNSC TCGA-CV-6954-01A 3 3 5'UTR-CDS Intra-chr q21.33 q21.33 71228 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF157-CA10 RNF157 chr17 74236234 - CA10 chr17 49711011 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 45 34 Out-of-frame Intra-chr q25.1 q22 Seq+ 71229 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF165-LAIR2 RNF165 chr18 43914298 - LAIR2 chr19 55014916 + Exonic hg19 LGG TCGA-E1-A7YL-01A 6 6 In-Frame Inter-chr q21.1 Seq+ 71230 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF165-PHLPP1 RNF165 chr18 43914298 - PHLPP1 chr18 60608951 + Exonic hg19 SARC TCGA-3B-A9HV-01A 32 16 Out-of-frame Intra-chr q21.1 q21.33 Tumor suppressor gene Seq+ 71231 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF165-SETBP1 RNF165 chr18 44015359 - SETBP1 chr18 42529846 + Exonic hg19 BRCA TCGA-BH-A1FN-01A 4 1 Out-of-frame Intra-chr q21.1 q12.3 Oncogene Transcription factor 71232 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF167-PIGL RNF167 chr17 4844452 - PIGL chr17 16203202 + Exonic hg19 BRCA TCGA-A8-A0AB-01A 13 15 Out-of-frame Intra-chr p13.2 p11.2 Seq+ 71233 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF167-PLD2 RNF167 chr17 4846236 - PLD2 chr17 4720441 + Exonic hg19 LUSC TCGA-18-3415-01A 2 2 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 71234 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF169-C11orf51 RNF169 chr11 74500744 - C11orf51 chr11 71822542 - Exonic hg19 BRCA TCGA-EW-A423-01A 5 7 CDS-5'UTR Intra-chr q13.4 71235 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF169-CALCOCO2 RNF169 chr11 74528759 - CALCOCO2 chr17 46919060 + Exonic hg19 BRCA TCGA-EW-A6SC-01A 56 43 CDS-5'UTR Inter-chr q13.4 q21.32 Seq+ 71236 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF169-CBX1 RNF169 chr11 74528759 - CBX1 chr17 46154403 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 15 7 CDS-5'UTR Inter-chr q13.4 q21.32 Seq+ 71237 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF169-POLD3 RNF169 chr11 74528759 - POLD3 chr11 74379822 + Exonic hg19 BLCA TCGA-UY-A78L-01A 3 2 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 71238 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF170-ADAM32 RNF170 chr8 42742871 - ADAM32 chr8 39079129 + Exonic hg19 COAD TCGA-CM-6166-01A 6 6 Out-of-frame Intra-chr p11.21 Seq+ 71239 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF170-CRYBB1 RNF170 chr8 42729074 - CRYBB1 chr22 27012302 - Exonic hg19 PRAD TCGA-M7-A725-01A 22 14 5'UTR-5'UTR Inter-chr p11.21 q12.1 Seq+ 71240 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF170-CSMD1 RNF170 chr8 42742871 - CSMD1 chr8 3474319 - Exonic hg19 PRAD TCGA-KC-A7FD-01A 6 2 Out-of-frame Intra-chr p11.21 p23.2 Tumor suppressor gene Seq+ 71241 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF170-GOLGA7 RNF170 chr8 42725147 - GOLGA7 chr8 41355028 + Exonic hg19 BRCA TCGA-AR-A1AJ-01A 8 5 Out-of-frame Intra-chr p11.21 p11.21 Seq+ 71242 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF170-HOOK3 RNF170 chr8 42742871 - HOOK3 chr8 42761316 + Exonic hg19 BRCA TCGA-E2-A1B0-01A 4 18 Out-of-frame Intra-chr p11.21 p11.21 Oncogene Seq+ 71243 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF170-SFRP1 RNF170 chr8 42742871 - SFRP1 chr8 41123008 - Exonic hg19 LUAD TCGA-50-6673-01A 15 16 Out-of-frame Intra-chr p11.21 p11.21 Tumor suppressor gene Seq+ 71244 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF180-GPX8 RNF180 chr5 63513223 - GPX8 chr5 54459883 + Exonic hg19 LUSC TCGA-63-A5MY-01A 4 8 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q11.2 Seq+ 71245 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF180-IPO11 RNF180 chr5 63513223 - IPO11 chr5 61887404 + Exonic hg19 KIRP TCGA-B9-A5W9-01A 2 2 In-Frame Intra-chr q12.3 Tumor suppressor gene q12.1 71246 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF185-EIF4ENIF1 RNF185 chr22 31556289 - EIF4ENIF1 chr22 31867903 - Exonic hg19 KIRP TCGA-P4-A5EB-01A 8 3 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 71247 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF185-ISX RNF185 chr22 31556289 - ISX chr22 35478511 + Exonic hg19 BRCA TCGA-AC-A3YI-01A 7 5 5'UTR-CDS Intra-chr q12.2 q12.3 Transcription factor Seq+ 71248 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF185-NKX1-1 RNF185 chr22 31556289 - NKX1-1 chr4 1397603 - Exonic hg19 UCS TCGA-NA-A4QY-01A 13 6 Out-of-frame Inter-chr q12.2 p16.3 71249 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF185-SMTN RNF185 chr22 31591567 - SMTN chr22 31476436 + Exonic hg19 BRCA TCGA-AN-A0FL-01A 4 2 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 71250 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF19A-ANKRD46 RNF19A chr8 101322095 - ANKRD46 chr8 101545539 - Exonic hg19 LUSC TCGA-66-2771-01A 12 17 5'UTR-5'UTR Intra-chr q22.2 q22.3 Seq+ 71251 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF19A-ANKRD46 RNF19A chr8 101276262 - ANKRD46 chr8 101545539 - Exonic hg19 BLCA TCGA-FD-A3SJ-01A 11 5 CDS-5'UTR Intra-chr q22.2 q22.3 Seq+ 71252 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF19A-ANKRD46 RNF19A chr8 101276899 - ANKRD46 chr8 101545539 - Exonic hg19 STAD TCGA-VQ-A922-01A 2 29 CDS-5'UTR Intra-chr q22.2 q22.3 Seq+ 71253 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF19A-ANKRD46 RNF19A chr8 101299729 - ANKRD46 chr8 101542088 - Exonic hg19 BLCA TCGA-XF-AAMG-01A 4 3 CDS-5'UTR Intra-chr q22.2 q22.3 Seq+ 71254 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF19A-C8orf83 RNF19A chr8 101299729 - C8orf83 chr8 93929238 - Exonic hg19 LUSC TCGA-60-2706-01A 6 5 Out-of-frame Intra-chr q22.2 71255 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF19A-F10 RNF19A chr8 101299729 - F10 chr13 113792771 + Exonic hg19 ESCA TCGA-VR-A8EX-01A 2 3 Out-of-frame Inter-chr q22.2 q34 71256 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF19A-HRSP12 RNF19A chr8 101325519 - HRSP12 chr8 99120979 - Exonic hg19 BRCA TCGA-BH-A1FD-01A 4 9 5'UTR-CDS Intra-chr q22.2 Seq+ 71257 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF19A-NCALD RNF19A chr8 101348336 - NCALD chr8 102792207 - Exonic hg19 BLCA TCGA-4Z-AA7M-01A 2 1 5'UTR-5'UTR Intra-chr q22.2 q22.3 Seq+ 71258 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF19A-NCALD RNF19A chr8 101269288 - NCALD chr8 102813898 - Exonic hg19 BLCA TCGA-K4-A6MB-01A 6 1 3'UTR-5'UTR Intra-chr q22.2 q22.3 Seq+ 71259 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF19A-PRSS3 RNF19A chr8 101322095 - PRSS3 chr9 33796641 + Exonic hg19 LUSC TCGA-21-1080-01A 86 75 5'UTR-CDS Inter-chr q22.2 p13.3 Seq+ 71260 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF19A-RALYL RNF19A chr8 101322095 - RALYL chr8 85686814 + Exonic hg19 BRCA TCGA-EW-A2FS-01A 4 1 5'UTR-CDS Intra-chr q22.2 q21.2 71261 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF19A-SLC41A3 RNF19A chr8 101348336 - SLC41A3 chr3 125731592 - Exonic hg19 BRCA TCGA-B6-A0RT-01A 10 6 5'UTR-CDS Inter-chr q22.2 q21.3 Seq+ 71262 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF2-MRC2 RNF2 chr1 185056772 - MRC2 chr17 60741909 + Exonic hg19 UCS TCGA-N5-A4RS-01A 4 7 Out-of-frame Inter-chr q25.3 Oncogene q23.2 Seq+ 71263 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF213-CARD14 RNF213 chr17 78269613 - CARD14 chr17 78162176 + Exonic hg19 BRCA TCGA-BH-A0B1-01A 5 8 Out-of-frame Intra-chr q25.3 Oncogene q25.3 Seq+ 71264 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF213-DYSFIP1 RNF213 chr17 78314156 - DYSFIP1 chr17 79791728 - Exonic hg19 UCS TCGA-NA-A5I1-01A 16 1 Out-of-frame Intra-chr q25.3 Oncogene 71265 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF213-ETV5 RNF213 chr17 78346965 - ETV5 chr3 185823731 - Exonic hg19 BRCA TCGA-AQ-A04H-01B 12 3 CDS-5'UTR Inter-chr q25.3 Oncogene q27.2 Oncogene Transcription factor Seq+ 71266 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF213-IL22RA1 RNF213 chr17 78237577 - IL22RA1 chr1 24465204 - Exonic hg19 BLCA TCGA-GV-A3JZ-01A 5 2 In-Frame Inter-chr q25.3 Oncogene p36.11 Seq+ 71267 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF213-MYH6 RNF213 chr17 78346534 - MYH6 chr14 23851771 - Exonic hg19 UCEC TCGA-AX-A3FX-01A 3 3 Out-of-frame Inter-chr q25.3 Oncogene q11.2 71268 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF213-NVL RNF213 chr17 78337114 - NVL chr1 224482113 - Exonic hg19 UCEC TCGA-FI-A3PV-01A 56 15 Out-of-frame Inter-chr q25.3 Oncogene q42.11 Seq+ 71269 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF213-SLC26A11 RNF213 chr17 78324196 - SLC26A11 chr17 78225128 + Exonic hg19 COAD TCGA-CA-6716-01A 8 4 Out-of-frame Intra-chr q25.3 Oncogene q25.3 Pub Seq+ 71270 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF213-SLC26A11 RNF213 chr17 78237577 - SLC26A11 chr17 78215570 + Exonic hg19 BRCA TCGA-D8-A27R-01A 2 2 In-Frame Intra-chr q25.3 Oncogene q25.3 Pub Seq+ 71271 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF213-SLC26A11 RNF213 chr17 78324196 - SLC26A11 chr17 78225128 + Exonic hg19 LIHC TCGA-DD-AAD6-01A 12 8 Out-of-frame Intra-chr q25.3 Oncogene q25.3 Pub Seq+ 71272 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF213-SLC26A11 RNF213 chr17 78322086 - SLC26A11 chr17 78225128 + Exonic hg19 ESCA TCGA-LN-A7HW-01A 2 5 In-Frame Intra-chr q25.3 Oncogene q25.3 Pub Seq+ 71273 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF213-TBCD RNF213 chr17 78237577 - TBCD chr17 80828100 + Exonic hg19 SKCM TCGA-XV-AAZV-01A 31 12 In-Frame Intra-chr q25.3 Oncogene Seq+ 71274 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF214-PAFAH1B2 RNF214 chr11 117115301 - PAFAH1B2 chr11 117042338 + Exonic hg19 OV TCGA-24-2023-01A 5 3 In-Frame Intra-chr q23.3 q23.3 Seq+ 71275 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF214-SIDT2 RNF214 chr11 117117664 - SIDT2 chr11 117054790 + Exonic hg19 UCEC TCGA-B5-A3S1-01A 3 1 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 71276 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF214-SIDT2 RNF214 chr11 117117664 - SIDT2 chr11 117060882 + Exonic hg19 PAAD TCGA-IB-7654-01A 19 8 In-Frame Intra-chr q23.3 q23.3 Seq+ 71277 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF215-GRIN2B RNF215 chr22 30817650 - GRIN2B chr12 13906849 - Exonic hg19 LUAD TCGA-44-7669-01A 2 1 5'UTR-CDS Inter-chr q12.2 p13.1 71278 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF215-SEC14L3 RNF215 chr22 30817650 - SEC14L3 chr22 30866569 - Exonic hg19 LIHC TCGA-BC-A216-01A 3 5 5'UTR-5'UTR Intra-chr q12.2 q12.2 71279 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF216-EIF2AK1 RNF216 chr7 5756347 - EIF2AK1 chr7 6064432 - Exonic hg19 KIRC TCGA-DV-5576-01A 97 54 In-Frame Intra-chr p22.1 p22.1 Seq+ 71280 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF216-JAZF1 RNF216 chr7 5680785 - JAZF1 chr7 28031600 - Exonic hg19 LUAD TCGA-69-7980-01A 5 5 Out-of-frame Intra-chr p22.1 p15.1 Transcription factor Seq+ 71281 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF216-MTHFD1L RNF216 chr7 5764955 - MTHFD1L chr6 151330955 + Exonic hg19 HNSC TCGA-CV-7236-01A 22 24 In-Frame Inter-chr p22.1 q25.1 Seq+ 71282 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF216-ST14 RNF216 chr7 5751392 - ST14 chr11 130058009 + Exonic hg19 BRCA TCGA-B6-A0IM-01A 58 28 In-Frame Inter-chr p22.1 q24.3 Seq+ 71283 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF217-ANKRD6 RNF217 chr6 125284572 - ANKRD6 chr6 90338831 + Exonic hg19 SARC TCGA-WK-A8XX-01A 10 9 5'UTR-CDS Intra-chr q22.31 q15 Seq+ 71284 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF217-PRDM1 RNF217 chr6 125284572 - PRDM1 chr6 106552700 + Exonic hg19 BRCA TCGA-A2-A04V-01A 8 4 5'UTR-5'UTR Intra-chr q22.31 q21 Oncogene Tumor suppressor gene Transcription factor Seq+ 71285 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF217-PTPRK RNF217 chr6 125284572 - PTPRK chr6 128718833 - Exonic hg19 HNSC TCGA-CV-A45Z-01A 2 1 5'UTR-CDS Intra-chr q22.31 Tumor suppressor gene 71286 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF217-RSPO3 RNF217 chr6 125284572 - RSPO3 chr6 127516968 + Exonic hg19 SARC TCGA-3B-A9HZ-01A 28 10 5'UTR-CDS Intra-chr q22.31 q22.33 Seq+ 71287 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF24-CDS2 RNF24 chr20 3925824 - CDS2 chr20 5154169 + Exonic hg19 LUAD TCGA-78-7145-01A 3 1 In-Frame Intra-chr p13 p12.3 Seq+ 71288 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF24-ISM1 RNF24 chr20 3925824 - ISM1 chr20 13260281 + Exonic hg19 BRCA TCGA-AR-A0U3-01A 4 1 In-Frame Intra-chr p13 p12.1 Seq+ 71289 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF24-RP11-352D3.2 RNF24 chr20 3996084 - RP11-352D3.2 chr20 4053311 - Exonic hg19 LUSC TCGA-77-8136-01A 12 12 Out-of-frame Intra-chr p13 71290 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF24-SNRPD3 RNF24 chr20 3996084 - SNRPD3 chr22 24963952 + Exonic hg19 ESCA TCGA-R6-A6Y0-01B 32 11 5'UTR-CDS Inter-chr p13 q11.23 Seq+ 71291 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF34-WDFY2 RNF34 chr12 121838021 - WDFY2 chr13 52234732 + Exonic hg19 SKCM TCGA-XV-AAZV-01A 2 3 Out-of-frame Inter-chr q24.31 q14.3 Seq+ 71292 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF38-GLIPR2 RNF38 chr9 36400551 - GLIPR2 chr9 36162359 + Exonic hg19 BRCA TCGA-A8-A08I-01A 35 15 5'UTR-CDS Intra-chr p13.2 p13.3 Seq+ 71293 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF38-GRHPR RNF38 chr9 36400551 - GRHPR chr9 37425919 + Exonic hg19 UCS TCGA-N5-A4RM-01A 4 6 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 71294 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF38-LMOD2 RNF38 chr9 36400551 - LMOD2 chr7 123301914 + Exonic hg19 PRAD TCGA-KK-A7B1-01A 16 4 5'UTR-CDS Inter-chr p13.2 q31.32 Seq+ 71295 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF40-IL21R RNF40 chr16 30774880 - IL21R chr16 27441377 + Exonic hg19 LUSC TCGA-56-8629-01A 17 4 Out-of-frame Intra-chr p11.2 p12.1 Oncogene Seq+ 71296 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF40-PLK1 RNF40 chr16 30783511 - PLK1 chr16 23698790 + Exonic hg19 BRCA TCGA-AC-A6IV-01A 10 10 Out-of-frame Intra-chr p11.2 p12.2 Other:PLK Tumor suppressor gene Seq+ 71297 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF41-CS RNF41 chr12 56607742 - CS chr12 56669979 - Exonic hg19 ACC TCGA-OR-A5KU-01A 51 11 In-Frame Intra-chr q13.3 q13.3 Seq+ 71298 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF41-MSRB3 RNF41 chr12 56607742 - MSRB3 chr12 65702309 + Exonic hg19 BLCA TCGA-UY-A78L-01A 4 2 5'UTR-5'UTR Intra-chr q13.3 q14.3 Seq+ 71299 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF41-MYO1C RNF41 chr12 56610213 - MYO1C chr17 1385852 - Exonic hg19 OV TCGA-24-1105-01A 8 5 5'UTR-CDS Inter-chr q13.3 p13.3 Seq+ 71300 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF41-PRIM1 RNF41 chr12 56615544 - PRIM1 chr12 57144979 - Exonic hg19 LUAD TCGA-55-8301-01A 2 1 5'UTR-CDS Intra-chr q13.3 q13.3 71301 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF43-HSF5 RNF43 chr17 56492687 - HSF5 chr17 56499791 - Exonic hg19 READ TCGA-AF-5654-01A 16 6 Out-of-frame Intra-chr q22 Oncogene q22 Transcription factor Seq+ 71302 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF43-LIMCH1 RNF43 chr17 56492687 - LIMCH1 chr4 41496553 + Exonic hg19 PAAD TCGA-IB-7887-01A 2 1 In-Frame Inter-chr q22 Oncogene p13 71303 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF43-RARA RNF43 chr17 56492687 - RARA chr17 38487109 + Exonic hg19 COAD TCGA-CM-6167-01A 4 2 CDS-5'UTR Intra-chr q22 Oncogene q21.2 Oncogene Transcription factor 71304 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF44-NXF3 RNF44 chr5 175964732 - NXF3 chrX 102339423 - Exonic hg19 BRCA TCGA-S3-A6ZF-01A 34 23 5'UTR-CDS Inter-chr q35.2 q22.1 Seq+ 71305 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF6-NAALADL2 RNF6 chr13 26792648 - NAALADL2 chr3 175455094 + Exonic hg19 LIHC TCGA-DD-AA3A-01A 2 3 Out-of-frame Inter-chr q12.13 q26.31 Seq+ 71306 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNF8-HIST1H2AC RNF8 chr6 37328350 - HIST1H2AC chr6 26138282 + Exonic hg19 PAAD TCGA-XN-A8T5-01A 12 15 Out-of-frame Intra-chr p21.2 Tumor suppressor gene p22.2 Seq+ 71307 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNFT1-PAAF1 RNFT1 chr17 58041969 - PAAF1 chr11 73589824 + Exonic hg19 BRCA TCGA-E2-A14V-01A 44 39 In-Frame Inter-chr q23.1 q13.4 Seq+ 71308 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNGTT-AHI1 RNGTT chr6 89479493 - AHI1 chr6 135606785 - Exonic hg19 SKCM TCGA-EE-A2A0-06A 6 10 Out-of-frame Intra-chr q15 q23.3 Seq+ 71309 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNGTT-BACH2 RNGTT chr6 89650790 - BACH2 chr6 90718575 - Exonic hg19 BRCA TCGA-A2-A04T-01A 8 3 CDS-5'UTR Intra-chr q15 q15 Transcription factor Seq+ 71310 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNGTT-SRSF12 RNGTT chr6 89673065 - SRSF12 chr6 89816977 - Exonic hg19 ESCA TCGA-LN-A7HV-01A 4 8 Out-of-frame Intra-chr q15 q15 Seq+ 71311 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNH1-COL5A1 RNH1 chr11 494515 - COL5A1 chr9 137533620 + Exonic hg19 SARC TCGA-DX-AB2H-01A 2 1 Out-of-frame Inter-chr Tumor suppressor gene q34.3 71312 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNH1-DEAF1 RNH1 chr11 507113 - DEAF1 chr11 644654 - Exonic hg19 BRCA TCGA-B6-A0I1-01A 5 5 5'UTR-CDS Intra-chr Tumor suppressor gene Transcription factor Seq+ 71313 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNH1-HRAS RNH1 chr11 507113 - HRAS chr11 533944 - Exonic hg19 HNSC TCGA-CR-7382-01A 203 124 5'UTR-CDS Intra-chr Tumor suppressor gene p15.5 Oncogene Seq+ 71314 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNH1-MYBPC1 RNH1 chr11 494515 - MYBPC1 chr12 102008274 + Exonic hg19 PRAD TCGA-EJ-7794-01A 2 3 3'UTR-CDS Inter-chr Tumor suppressor gene q23.2 71315 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNH1-SCT RNH1 chr11 507113 - SCT chr11 626989 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 36 46 5'UTR-CDS Intra-chr Tumor suppressor gene Seq+ 71316 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNH1-TOLLIP RNH1 chr11 507113 - TOLLIP chr11 1317024 - Exonic hg19 UCEC TCGA-A5-A3LP-01A 5 3 5'UTR-CDS Intra-chr Tumor suppressor gene p15.5 Seq+ 71317 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNMTL1-ALOX15B RNMTL1 chr17 691372 - ALOX15B chr17 7942704 + Exonic hg19 CHOL TCGA-W5-AA31-01A 10 3 Out-of-frame Intra-chr p13.1 Tumor suppressor gene 71318 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RNPC3-KIAA0825 RNPC3 chr1 104068884 - KIAA0825 chr5 93753085 - Exonic hg19 BRCA TCGA-E2-A14Z-01A 3 10 Out-of-frame Inter-chr p21.1 q15 Seq+ 71319 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROBO1-HECW2 ROBO1 chr3 79067557 - HECW2 chr2 197106928 - Exonic hg19 BRCA TCGA-A7-A26F-01A 2 1 In-Frame Inter-chr p12.3 Tumor suppressor gene q32.3 71320 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROBO1-HMCN1 ROBO1 chr3 78987751 - HMCN1 chr1 185966561 + Exonic hg19 SKCM TCGA-ER-A3EV-06A 8 2 In-Frame Inter-chr p12.3 Tumor suppressor gene q25.3 Seq+ 71321 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROBO1-LPHN3 ROBO1 chr3 78734896 - LPHN3 chr4 62679527 + Exonic hg19 BLCA TCGA-XF-A9SK-01A 3 2 In-Frame Inter-chr p12.3 Tumor suppressor gene Seq+ 71322 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROBO1-MED12L ROBO1 chr3 78987751 - MED12L chr3 150911277 + Exonic hg19 LUSC TCGA-66-2781-01A 2 4 Out-of-frame Intra-chr p12.3 Tumor suppressor gene q25.1 Seq+ 71323 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROBO1-MYO1D ROBO1 chr3 79067557 - MYO1D chr17 31107802 - Exonic hg19 CESC TCGA-C5-A7X5-01A 6 1 Out-of-frame Inter-chr p12.3 Tumor suppressor gene q11.2 71324 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROBO1-SEMA5B ROBO1 chr3 78688894 - SEMA5B chr3 122634737 - Exonic hg19 SKCM TCGA-EB-A4IQ-01A 8 1 Out-of-frame Intra-chr p12.3 Tumor suppressor gene q21.1 Seq+ 71325 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROBO1-THAP4 ROBO1 chr3 78742498 - THAP4 chr2 242545888 - Exonic hg19 SKCM TCGA-D9-A6EC-06A 160 78 In-Frame Inter-chr p12.3 Tumor suppressor gene q37.3 Transcription factor Seq+ 71326 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROBO2-ERLIN2 ROBO2 chr3 77147491 - ERLIN2 chr8 37607077 + Exonic hg19 LUSC TCGA-56-6546-01A 25 15 In-Frame Inter-chr p12.3 p11.23 Seq+ 71327 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROBO2-TNNT2 ROBO2 chr3 77089997 - TNNT2 chr1 201328791 - Exonic hg19 SARC TCGA-DX-A3U6-01A 4 1 Out-of-frame Inter-chr p12.3 q32.1 Seq+ 71328 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROCK1-ABHD3 ROCK1 chr18 18690779 - ABHD3 chr18 19244191 - Exonic hg19 LUSC TCGA-85-8048-01A 2 1 In-Frame Intra-chr q11.1 AGC:DMPK q11.2 Seq+ 71329 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROCK1-ABHD3 ROCK1 chr18 18690779 - ABHD3 chr18 19283708 - Exonic hg19 BRCA TCGA-C8-A12P-01A 24 18 In-Frame Intra-chr q11.1 AGC:DMPK q11.2 Seq+ 71330 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROCK1-ANKRD29 ROCK1 chr18 18690779 - ANKRD29 chr18 21229157 - Exonic hg19 STAD TCGA-BR-8677-01A 2 2 In-Frame Intra-chr q11.1 AGC:DMPK q11.2 Seq+ 71331 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROCK1-ANKRD29 ROCK1 chr18 18595392 - ANKRD29 chr18 21181273 - Exonic hg19 PAAD TCGA-IB-A7M4-01A 2 2 In-Frame Intra-chr q11.1 AGC:DMPK q11.2 Seq+ 71332 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROCK1-B4GALT6 ROCK1 chr18 18690779 - B4GALT6 chr18 29246335 - Exonic hg19 HNSC TCGA-CV-6953-01A 12 6 Out-of-frame Intra-chr q11.1 AGC:DMPK q12.1 Seq+ 71333 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROCK1-C20orf103 ROCK1 chr18 18619433 - C20orf103 chr20 9510289 + Exonic hg19 SARC TCGA-QQ-A5V9-01A 23 36 Out-of-frame Inter-chr q11.1 AGC:DMPK 71334 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROCK1-CABYR ROCK1 chr18 18690779 - CABYR chr18 21735665 + Exonic hg19 LUAD TCGA-97-7552-01A 17 16 Out-of-frame Intra-chr q11.1 AGC:DMPK q11.2 Seq+ 71335 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROCK1-CDH2 ROCK1 chr18 18571137 - CDH2 chr18 25532323 - Exonic hg19 LUSC TCGA-LA-A7SW-01A 44 41 Out-of-frame Intra-chr q11.1 AGC:DMPK q12.1 Oncogene Seq+ 71336 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROCK1-CHST9 ROCK1 chr18 18539801 - CHST9 chr18 24722869 - Exonic hg19 PAAD TCGA-2J-AAB4-01A 5 4 CDS-5'UTR Intra-chr q11.1 AGC:DMPK q11.2 Seq+ 71337 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROCK1-DCC ROCK1 chr18 18586312 - DCC chr18 50912413 + Exonic hg19 HNSC TCGA-CV-5434-01A 29 15 In-Frame Intra-chr q11.1 AGC:DMPK q21.2 Oncogene Tumor suppressor gene Seq+ 71338 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROCK1-FABP2 ROCK1 chr18 18690779 - FABP2 chr4 120241997 - Exonic hg19 BLCA TCGA-4Z-AA84-01A 9 9 Out-of-frame Inter-chr q11.1 AGC:DMPK q26 Seq+ 71339 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROCK1-GATA6 ROCK1 chr18 18690779 - GATA6 chr18 19780619 + Exonic hg19 LUAD TCGA-44-A47G-01A 8 3 In-Frame Intra-chr q11.1 AGC:DMPK q11.2 Transcription factor Seq+ 71340 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROCK1-GUCA2B ROCK1 chr18 18603581 - GUCA2B chr1 42620351 + Exonic hg19 BLCA TCGA-BT-A3PK-01A 2 8 In-Frame Inter-chr q11.1 AGC:DMPK p34.2 Seq+ 71341 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROCK1-LAMA3 ROCK1 chr18 18546878 - LAMA3 chr18 21393021 + Exonic hg19 STAD TCGA-CG-4301-01A 3 4 In-Frame Intra-chr q11.1 AGC:DMPK q11.2 Seq+ 71342 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROCK1-LRIG3 ROCK1 chr18 18625253 - LRIG3 chr12 59308117 - Exonic hg19 BRCA TCGA-A8-A091-01A 23 5 In-Frame Inter-chr q11.1 AGC:DMPK q14.1 Tumor suppressor gene Seq+ 71343 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROCK1-MAP1B ROCK1 chr18 18546878 - MAP1B chr5 71479570 + Exonic hg19 SKCM TCGA-YD-A9TA-06A 9 5 In-Frame Inter-chr q11.1 AGC:DMPK q13.2 Seq+ 71344 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROCK1-OSBPL1A ROCK1 chr18 18603581 - OSBPL1A chr18 21883682 - Exonic hg19 PAAD TCGA-XN-A8T3-01A 4 4 In-Frame Intra-chr q11.1 AGC:DMPK q11.2 Seq+ 71345 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROCK1-RNF38 ROCK1 chr18 18690779 - RNF38 chr9 36390613 - Exonic hg19 LUSC TCGA-56-A49D-01A 10 4 In-Frame Inter-chr q11.1 AGC:DMPK p13.2 Seq+ 71346 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROCK1-THNSL1 ROCK1 chr18 18690779 - THNSL1 chr10 25310671 + Exonic hg19 PAAD TCGA-XN-A8T5-01A 2 1 CDS-5'UTR Inter-chr q11.1 AGC:DMPK p12.1 Seq+ 71347 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROCK2-ASAP2 ROCK2 chr2 11338617 - ASAP2 chr2 9419446 + Exonic hg19 STAD TCGA-HU-A4GU-01A 2 27 In-Frame Intra-chr p25.1 AGC:DMPK p25.1 Seq+ 71348 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROCK2-DTNB ROCK2 chr2 11484122 - DTNB chr2 25656864 - Exonic hg19 LUAD TCGA-67-3770-01A 5 1 In-Frame Intra-chr p25.1 AGC:DMPK p23.3 71349 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROCK2-NCOA1 ROCK2 chr2 11484122 - NCOA1 chr2 24866835 + Exonic hg19 KIRP TCGA-G7-6792-01A 8 9 CDS-5'UTR Intra-chr p25.1 AGC:DMPK p23.3 Oncogene Transcription factor Seq+ 71350 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROCK2-NTSR2 ROCK2 chr2 11484122 - NTSR2 chr2 11798848 - Exonic hg19 PRAD TCGA-EJ-A46G-01A 23 12 Out-of-frame Intra-chr p25.1 AGC:DMPK p25.1 Seq+ 71351 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROD1-ASTN2 ROD1 chr9 115095750 - ASTN2 chr9 119770538 - Exonic hg19 BRCA TCGA-A2-A04U-01A 5 1 Out-of-frame Intra-chr q33.1 71352 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROD1-ENDOG ROD1 chr9 115095750 - ENDOG chr9 131583018 + Exonic hg19 BRCA TCGA-A7-A26F-01A 15 4 Out-of-frame Intra-chr q34.11 71353 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROD1-SVEP1 ROD1 chr9 115095750 - SVEP1 chr9 113139646 - Exonic hg19 LUAD TCGA-55-7726-01A 19 6 Out-of-frame Intra-chr q31.3 71354 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROD1-SVEP1 ROD1 chr9 115095750 - SVEP1 chr9 113141797 - Exonic hg19 SKCM TCGA-EB-A82C-01A 168 86 Out-of-frame Intra-chr q31.3 71355 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROR1-IL12RB2 ROR1 chr1 64475048 - IL12RB2 chr1 67787285 + Exonic hg19 SKCM TCGA-ER-A2NG-06A 2 2 In-Frame Intra-chr p31.3 TK:Ror p31.3 71356 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROR2-FAM50B ROR2 chr9 94712149 - FAM50B chr6 3850023 + Exonic hg19 UCS TCGA-N8-A4PM-01A 2 1 CDS-5'UTR Inter-chr q22.31 TK:Ror Tumor suppressor gene p25.2 Seq+ 71357 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ROR2-KCNC2 ROR2 chr9 94710889 - KCNC2 chr12 75445097 - Exonic hg19 BRCA TCGA-AQ-A04L-01B 4 5 Out-of-frame Inter-chr q22.31 TK:Ror Tumor suppressor gene q21.1 Seq+ 71358 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RORA-ALMS1 RORA chr15 61521252 - ALMS1 chr2 73716761 + Exonic hg19 BRCA TCGA-A8-A08F-01A 3 1 Out-of-frame Inter-chr q22.2 Transcription factor p13.1 71359 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RORA-ARNT2 RORA chr15 61521252 - ARNT2 chr15 80885941 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 7 5 Out-of-frame Intra-chr q22.2 Transcription factor q25.1 Transcription factor Seq+ 71360 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RORA-CLSTN2 RORA chr15 61521252 - CLSTN2 chr3 139894793 + Exonic hg19 LGG TCGA-DB-5278-01A 3 7 In-Frame Inter-chr q22.2 Transcription factor q23 Seq+ 71361 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RORA-FSTL1 RORA chr15 60884586 - FSTL1 chr3 120123818 - Exonic hg19 SARC TCGA-QC-AA9N-01A 27 17 Out-of-frame Inter-chr q22.2 Transcription factor q13.33 Seq+ 71362 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RORA-LOXL1 RORA chr15 60884586 - LOXL1 chr15 74235195 + Exonic hg19 SARC TCGA-X6-A8C3-01A 60 52 In-Frame Intra-chr q22.2 Transcription factor q24.1 Seq+ 71363 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RORA-NUP210L RORA chr15 61521252 - NUP210L chr1 154076686 - Exonic hg19 BRCA TCGA-AR-A2LR-01A 2 2 Out-of-frame Inter-chr q22.2 Transcription factor q21.3 71364 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RORA-PTPN9 RORA chr15 60884586 - PTPN9 chr15 75798344 - Exonic hg19 SARC TCGA-SI-AA8B-01A 6 11 Out-of-frame Intra-chr q22.2 Transcription factor q24.2 Seq+ 71365 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RORA-STARD9 RORA chr15 60884586 - STARD9 chr15 43008875 + Exonic hg19 PRAD TCGA-G9-7525-01A 2 1 Out-of-frame Intra-chr q22.2 Transcription factor q15.2 Seq+ 71366 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-101E3.5-APBA1 RP11-101E3.5 chr9 131715125 - APBA1 chr9 72132195 - Exonic hg19 SARC TCGA-K1-A6RU-01A 5 6 Out-of-frame Intra-chr q21.12 71367 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-121M22.1-CTNND2 RP11-121M22.1 chr11 130184499 - CTNND2 chr5 11365002 - Exonic hg19 SARC TCGA-FX-A2QS-01A 3 2 Out-of-frame Inter-chr p15.2 71368 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-1220K2.2-TTC26 RP11-1220K2.2 chr7 141859143 - TTC26 chr7 138849878 + Exonic hg19 SKCM TCGA-EE-A2M7-06A 12 7 Out-of-frame Intra-chr q34 71369 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-123B3.6-PREX1 RP11-123B3.6 chr10 50736463 - PREX1 chr20 47324959 - Exonic hg19 BRCA TCGA-A7-A2KD-01A 24 4 Out-of-frame Inter-chr q13.13 71370 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-124D2.2-C14orf164 RP11-124D2.2 chr14 23777408 - C14orf164 chr14 23729093 + Exonic hg19 LIHC TCGA-PD-A5DF-01A 11 5 Out-of-frame Intra-chr 71371 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-150O12.1-CPM RP11-150O12.1 chr8 37333360 - CPM chr12 69279669 - Exonic hg19 BRCA TCGA-AC-A7VB-01A 13 5 Out-of-frame Inter-chr q15 71372 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-150O12.1-RP11-150O12.5 RP11-150O12.1 chr8 37411540 - RP11-150O12.5 chr8 37422402 + Exonic hg19 BRCA TCGA-A8-A09R-01A 3 1 Out-of-frame Intra-chr 71373 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-155D18.11-BAP1 RP11-155D18.11 chr3 52021640 - BAP1 chr3 52441476 - Exonic hg19 MESO TCGA-LK-A4O5-01A 11 2 Out-of-frame Intra-chr p21.1 71374 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-159G9.5-RALBP1 RP11-159G9.5 chr3 88135552 - RALBP1 chr18 9512989 + Exonic hg19 LUSC TCGA-22-4604-01A 5 5 Out-of-frame Inter-chr p11.22 71375 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-15K19.2-LANCL2 RP11-15K19.2 chr7 55974072 - LANCL2 chr7 55459486 + Exonic hg19 GBM TCGA-06-0750-01A 4 20 Out-of-frame Intra-chr p11.2 71376 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-15K19.2-SEPT14 RP11-15K19.2 chr7 55974072 - SEPT14 chr7 55914330 - Exonic hg19 GBM TCGA-32-5222-01A 59 121 Out-of-frame Intra-chr p11.2 71377 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-176H8.1-BAZ1A RP11-176H8.1 chr14 31922481 - BAZ1A chr14 35228052 - Exonic hg19 BRCA TCGA-A2-A0CY-01A 2 3 Out-of-frame Intra-chr q13.2 71378 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-195F19.29-WDR72 RP11-195F19.29 chr9 34648453 - WDR72 chr15 53889471 - Exonic hg19 SARC TCGA-DX-A1KY-01A 15 3 Out-of-frame Inter-chr q21.3 71379 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-35N6.1-SLC35F3 RP11-35N6.1 chr9 103791384 - SLC35F3 chr1 234444847 + Exonic hg19 BRCA TCGA-AQ-A04J-01A 2 2 Out-of-frame Inter-chr q42.2 71380 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-360L9.4-NARS2 RP11-360L9.4 chr8 41435825 - NARS2 chr11 78204241 - Exonic hg19 BRCA TCGA-AN-A03Y-01A 100 79 Out-of-frame Inter-chr q14.1 71381 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-362K2.2-CPM RP11-362K2.2 chr12 58937962 - CPM chr12 69279669 - Exonic hg19 SARC TCGA-3B-A9HS-01A 6 19 Out-of-frame Intra-chr q15 71382 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-383H13.1-PHACTR3 RP11-383H13.1 chr8 72756657 - PHACTR3 chr20 58381096 + Exonic hg19 SKCM TCGA-EE-A2MH-06A 23 8 Out-of-frame Inter-chr q13.32 71383 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-407N17.3-MIPOL1 RP11-407N17.3 chr14 39796226 - MIPOL1 chr14 38016110 + Exonic hg19 STAD TCGA-BR-A4QI-01A 4 34 Out-of-frame Intra-chr q13.3 71384 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-419C5.2-WDR88 RP11-419C5.2 chr16 70016253 - WDR88 chr19 33628583 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 4 7 Out-of-frame Inter-chr q13.11 71385 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-428C6.1-BTF3 RP11-428C6.1 chr5 72980709 - BTF3 chr5 72801017 + Exonic hg19 STAD TCGA-IN-A6RN-01A 2 22 Out-of-frame Intra-chr q13.2 71386 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-468E2.1-NPAS3 RP11-468E2.1 chr14 24661377 - NPAS3 chr14 34081611 + Exonic hg19 LUAD TCGA-78-7155-01A 20 2 Out-of-frame Intra-chr q13.1 71387 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-47I22.3-PRKCH RP11-47I22.3 chr14 62037478 - PRKCH chr14 61952220 + Exonic hg19 LUAD TCGA-69-7978-01A 13 16 Out-of-frame Intra-chr q23.1 71388 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-47I22.3-PRKCH RP11-47I22.3 chr14 62037478 - PRKCH chr14 61952220 + Exonic hg19 HNSC TCGA-BB-4227-01A 10 6 Out-of-frame Intra-chr q23.1 71389 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-47I22.3-PRKCH RP11-47I22.3 chr14 62037478 - PRKCH chr14 61995793 + Exonic hg19 BRCA TCGA-BH-A0C0-01A 5 7 Out-of-frame Intra-chr q23.1 71390 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-47I22.3-PRKCH RP11-47I22.3 chr14 62037478 - PRKCH chr14 61909829 + Exonic hg19 KIRC TCGA-CJ-5681-01A 3 2 Out-of-frame Intra-chr q23.1 71391 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-47I22.3-PRKCH RP11-47I22.3 chr14 62037478 - PRKCH chr14 61909829 + Exonic hg19 BRCA TCGA-EW-A1P1-01A 18 8 Out-of-frame Intra-chr q23.1 71392 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-540D14.8-FLAD1 RP11-540D14.8 chr1 155036412 - FLAD1 chr1 154960581 + Exonic hg19 BRCA TCGA-E2-A1LE-01A 2 1 Out-of-frame Intra-chr q21.3 71393 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-540D14.8-PIK3C2G RP11-540D14.8 chr1 155057880 - PIK3C2G chr12 18499575 + Exonic hg19 BRCA TCGA-EW-A1PC-01B 17 8 Out-of-frame Inter-chr p12.3 71394 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-546D6.2-CDC6 RP11-546D6.2 chr12 123717622 - CDC6 chr17 38447721 + Exonic hg19 LUSC TCGA-22-5481-01A 4 13 Out-of-frame Inter-chr q21.2 71395 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-548K23.11-AS3MT RP11-548K23.11 chr10 99426877 - AS3MT chr10 104650301 + Exonic hg19 PRAD TCGA-J9-A8CK-01A 6 8 Out-of-frame Intra-chr q24.32 71396 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-574F21.3-CD1C RP11-574F21.3 chr1 160206925 - CD1C chr1 158260924 + Exonic hg19 SARC TCGA-DX-A1KU-01A 10 6 Out-of-frame Intra-chr q23.1 71397 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-680F20.9-KIRREL3 RP11-680F20.9 chr11 125801200 - KIRREL3 chr11 126432807 - Exonic hg19 BRCA TCGA-AR-A256-01A 3 2 Out-of-frame Intra-chr q24.2 71398 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-73M18.2-MARK3 RP11-73M18.2 chr14 104053701 - MARK3 chr14 103969219 + Exonic hg19 LUAD TCGA-38-4630-01A 73 13 Out-of-frame Intra-chr q32.32 71399 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-73M18.2-MARK3 RP11-73M18.2 chr14 104124113 - MARK3 chr14 103969219 + Exonic hg19 UCEC TCGA-B5-A3S1-01A 2 1 Out-of-frame Intra-chr q32.32 71400 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-73M18.2-MARK3 RP11-73M18.2 chr14 104136620 - MARK3 chr14 103915256 + Exonic hg19 BRCA TCGA-D8-A1JK-01A 11 5 Out-of-frame Intra-chr q32.32 71401 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-73M18.2-TRAF3 RP11-73M18.2 chr14 104029461 - TRAF3 chr14 103296671 + Exonic hg19 BLCA TCGA-E7-A85H-01A 4 5 Out-of-frame Intra-chr q32.32 71402 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-744N12.3-SLC30A4 RP11-744N12.3 chr11 128556122 - SLC30A4 chr15 45803482 - Exonic hg19 PRAD TCGA-CH-5738-01A 29 13 Out-of-frame Inter-chr q21.1 71403 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-762I7.5-VAMP8 RP11-762I7.5 chr12 56182859 - VAMP8 chr2 85806132 + Exonic hg19 LUSC TCGA-NC-A5HQ-01A 42 18 Out-of-frame Inter-chr p11.2 71404 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-785H20.1-ZNF317 RP11-785H20.1 chr8 122901216 - ZNF317 chr19 9266601 + Exonic hg19 UCEC TCGA-BG-A3PP-01A 3 3 Out-of-frame Inter-chr p13.2 71405 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-849H4.2-RNF121 RP11-849H4.2 chr11 71627120 - RNF121 chr11 71668273 + Exonic hg19 LUSC TCGA-70-6723-01A 4 2 Out-of-frame Intra-chr q13.4 71406 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-849H4.2-VPS37C RP11-849H4.2 chr11 71634355 - VPS37C chr11 60906307 - Exonic hg19 BRCA TCGA-A2-A1G4-01A 2 4 Out-of-frame Intra-chr q12.2 71407 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP11-977G19.10-PAN2 RP11-977G19.10 chr12 56679700 - PAN2 chr12 56722425 - Exonic hg19 KIRC TCGA-B0-4819-01A 3 1 Out-of-frame Intra-chr q13.3 71408 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP1-199H16.5-NCF4 RP1-199H16.5 chr22 39032456 - NCF4 chr22 37266457 + Exonic hg19 LIHC TCGA-MI-A75I-01A 2 1 Out-of-frame Intra-chr 71409 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP2-C1orf43 RP2 chrX 46696637 - C1orf43 chr1 154187050 - Exonic hg19 LUAD TCGA-L9-A444-01A 41 15 In-Frame Inter-chr p11.3 q21.3 Seq+ 71410 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP2-CHST7 RP2 chrX 46696637 - CHST7 chrX 46457195 + Exonic hg19 SKCM TCGA-EE-A2GL-06A 16 15 CDS-3'UTR Intra-chr p11.3 p11.3 Seq+ 71411 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP3-402G11.5-GRIP1 RP3-402G11.5 chr22 50640019 - GRIP1 chr12 66800208 - Exonic hg19 SARC TCGA-DX-A1L4-01A 7 6 Out-of-frame Inter-chr q14.3 71412 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP4-697K14.7-C20orf195 RP4-697K14.7 chr20 62203461 - C20orf195 chr20 62187007 + Exonic hg19 HNSC TCGA-CV-7097-01A 6 3 Out-of-frame Intra-chr 71413 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP4-761I2.2-ENPP3 RP4-761I2.2 chr6 11094622 - ENPP3 chr6 131958375 + Exonic hg19 BRCA TCGA-OL-A6VO-01A 3 2 Out-of-frame Intra-chr q23.2 71414 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP4-761I2.2-MIB2 RP4-761I2.2 chr6 11094622 - MIB2 chr1 1551888 + Exonic hg19 BRCA TCGA-C8-A12K-01A 7 3 Out-of-frame Inter-chr p36.33 71415 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP4-761I2.2-RCAN2 RP4-761I2.2 chr6 11094622 - RCAN2 chr6 46424715 - Exonic hg19 ACC TCGA-OR-A5LM-01A 10 4 Out-of-frame Intra-chr p12.3 71416 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP4-761I2.2-TM6SF1 RP4-761I2.2 chr6 11094622 - TM6SF1 chr15 83781549 + Exonic hg19 PRAD TCGA-TP-A8TT-01A 4 1 Out-of-frame Inter-chr q25.2 71417 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP4-761I2.2-TTLL5 RP4-761I2.2 chr6 11094622 - TTLL5 chr14 76184204 + Exonic hg19 GBM TCGA-27-1835-01A 4 16 Out-of-frame Inter-chr q24.3 71418 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RP4-788L13.1-IQGAP3 RP4-788L13.1 chr1 99730227 - IQGAP3 chr1 156521887 - Exonic hg19 BRCA TCGA-A8-A08J-01A 3 1 Out-of-frame Intra-chr q22 71419 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPA1-WDR81 RPA1 chr17 1756483 - WDR81 chr17 1633674 + Exonic hg19 CHOL TCGA-W5-AA31-01A 14 13 In-Frame Intra-chr p13.3 Tumor suppressor gene Seq+ 71420 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPAIN-FHIT RPAIN chr17 5326149 - FHIT chr3 59908140 - Exonic hg19 BRCA TCGA-A7-A0CJ-01A 53 27 Out-of-frame Inter-chr p13.2 p14.2 Tumor suppressor gene Seq+ 71421 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPAIN-LRRC27 RPAIN chr17 5324786 - LRRC27 chr10 134174961 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 16 9 In-Frame Inter-chr p13.2 q26.3 Seq+ 71422 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPAIN-STX8 RPAIN chr17 5326149 - STX8 chr17 9153962 - Exonic hg19 SARC TCGA-HB-A2OT-01A 108 3 In-Frame Intra-chr p13.2 p13.1 Seq+ 71423 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPAP3-ADAM32 RPAP3 chr12 48073276 - ADAM32 chr8 39141105 + Exonic hg19 LUSC TCGA-43-6770-01A 34 29 Out-of-frame Inter-chr q13.11 Seq+ 71424 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPAP3-AVIL RPAP3 chr12 48073276 - AVIL chr12 58197452 - Exonic hg19 SARC TCGA-DX-A2J4-01A 7 2 In-Frame Intra-chr q13.11 q14.1 Seq+ 71425 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPAP3-HDAC7 RPAP3 chr12 48095247 - HDAC7 chr12 48196057 - Exonic hg19 BLCA TCGA-E7-A5KE-01A 14 7 Out-of-frame Intra-chr q13.11 q13.11 Seq+ 71426 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPAP3-KRT74 RPAP3 chr12 48073276 - KRT74 chr12 52965238 - Exonic hg19 SARC TCGA-DX-A2J4-01A 5 3 In-Frame Intra-chr q13.11 q13.13 71427 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPF1-PRKACB RPF1 chr1 84945192 - PRKACB chr1 84700863 + Exonic hg19 SKCM TCGA-D3-A3C1-06A 6 5 In-Frame Intra-chr p22.3 Tumor suppressor gene p31.1 Seq+ 71428 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPF2-GTF3C6 RPF2 chr6 111306341 - GTF3C6 chr6 111288713 + Exonic hg19 KIRC TCGA-B8-5165-01A 35 116 Out-of-frame Intra-chr q21 q21 Seq+ 71429 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPGRIP1L-KLHL22 RPGRIP1L chr16 53720345 - KLHL22 chr22 20843499 - Exonic hg19 BRCA TCGA-A2-A0T3-01A 5 4 CDS-5'UTR Inter-chr q12.2 q11.21 Seq+ 71430 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL11-SIAE RPL11 chr1 24022915 - SIAE chr11 124543777 - Exonic hg19 UCEC TCGA-AJ-A3EJ-01A 2 12 3'UTR-5'UTR Inter-chr p36.11 Tumor suppressor gene q24.2 71431 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL18-ABCF1 RPL18 chr19 49118590 - ABCF1 chr6 30545853 + Exonic hg19 HNSC TCGA-CV-7253-01A 2 19 3'UTR-CDS Inter-chr q13.33 71432 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL18-AR RPL18 chr19 49118588 - AR chrX 66914515 + Exonic hg19 PRAD TCGA-XQ-A8TA-01A 2 50 3'UTR-CDS Inter-chr q13.33 q12 Oncogene Tumor suppressor gene Transcription factor 71433 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL18-CFB RPL18 chr19 49118585 - CFB chr6 31913427 + Exonic hg19 HNSC TCGA-CR-7376-01A 2 1 Out-of-frame Inter-chr q13.33 71434 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL18-COL1A1 RPL18 chr19 49118650 - COL1A1 chr17 48278993 - Exonic hg19 HNSC TCGA-D6-A6EP-01A 2 1 Out-of-frame Inter-chr q13.33 q21.33 Oncogene 71435 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL18-DDX27 RPL18 chr19 49118590 - DDX27 chr20 47849303 + Exonic hg19 UCS TCGA-NA-A4QX-01A 2 6 Out-of-frame Inter-chr q13.33 q13.13 71436 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL18-FAR1 RPL18 chr19 49118590 - FAR1 chr11 13744912 + Exonic hg19 SKCM TCGA-EE-A2MG-06A 2 5 Out-of-frame Inter-chr q13.33 p15.3 71437 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL18-PLEKHB2 RPL18 chr19 49118588 - PLEKHB2 chr2 131876464 + Exonic hg19 BLCA TCGA-GV-A3JV-01A 2 86 3'UTR-5'UTR Inter-chr q13.33 q21.1 71438 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL18-RABEP1 RPL18 chr19 49118590 - RABEP1 chr17 5283828 + Exonic hg19 LUSC TCGA-90-A4ED-01A 2 70 Out-of-frame Inter-chr q13.33 p13.2 71439 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL18-SLC38A5 RPL18 chr19 49118590 - SLC38A5 chrX 48327824 - Exonic hg19 SKCM TCGA-D9-A4Z6-01A 2 1 3'UTR-5'UTR Inter-chr q13.33 p11.23 71440 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL18-SLC38A5 RPL18 chr19 49118590 - SLC38A5 chrX 48327824 - Exonic hg19 SKCM TCGA-D9-A4Z6-06A 2 1 3'UTR-5'UTR Inter-chr q13.33 p11.23 71441 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL18-SQSTM1 RPL18 chr19 49118588 - SQSTM1 chr5 179250858 + Exonic hg19 PRAD TCGA-J9-A8CN-01A 2 1 3'UTR-CDS Inter-chr q13.33 q35.3 71442 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL18-TAGLN RPL18 chr19 49118650 - TAGLN chr11 117070098 + Exonic hg19 PRAD TCGA-VN-A88I-01A 2 1 Out-of-frame Inter-chr q13.33 q23.3 Tumor suppressor gene 71443 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL18-ZNF827 RPL18 chr19 49118590 - ZNF827 chr4 146859787 - Exonic hg19 SKCM TCGA-D9-A4Z3-01A 2 64 Out-of-frame Inter-chr q13.33 q31.22 Transcription factor 71444 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL19-CCL11 RPL19 chr17 37356602 - CCL11 chr17 32614115 + Exonic hg19 BRCA TCGA-BH-A0B7-01A 11 894 Out-of-frame Intra-chr q12 q12 Seq+ 71445 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL22-ACOT7 RPL22 chr1 6252990 - ACOT7 chr1 6324755 - Exonic hg19 STAD TCGA-BR-A452-01A 2 1157 Out-of-frame Intra-chr p36.31 p36.31 Seq+ 71446 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL22-PRDM16 RPL22 chr1 6257712 - PRDM16 chr1 3342145 + Exonic hg19 SARC TCGA-DX-AB2X-01A 128 162 Out-of-frame Intra-chr p36.31 p36.32 Transcription factor Seq+ 71447 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL37A-DDX27 RPL37A chr2 217366186 - DDX27 chr20 47849303 + Exonic hg19 SKCM TCGA-GN-A262-06A 2 35 Out-of-frame Inter-chr q35 q13.13 71448 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL37A-NDUFV1 RPL37A chr2 217366186 - NDUFV1 chr11 67375697 + Exonic hg19 PRAD TCGA-KC-A4BL-01A 2 5 Out-of-frame Inter-chr q35 q13.2 71449 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL38-DDX21 RPL38 chr17 72206019 - DDX21 chr10 70723858 + Exonic hg19 BLCA TCGA-GU-A42Q-01A 2 13 Out-of-frame Inter-chr q25.1 q22.1 71450 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL41-NACA RPL41 chr12 56510995 - NACA chr12 57108471 - Exonic hg19 GBM TCGA-06-5856-01A 4 80 Out-of-frame Intra-chr q13.2 q13.3 Seq+ 71451 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL41-SMARCC2 RPL41 chr12 56510583 - SMARCC2 chr12 56580024 - Exonic hg19 BLCA TCGA-DK-AA6P-01A 7 1 In-Frame Intra-chr q13.2 q13.2 Seq+ 71452 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL8-ABCF1 RPL8 chr8 146015154 - ABCF1 chr6 30545853 + Exonic hg19 PRAD TCGA-HI-7168-01A 2 4 3'UTR-CDS Inter-chr q24.3 71453 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL8-CFB RPL8 chr8 146015155 - CFB chr6 31913427 + Exonic hg19 LUAD TCGA-95-A4VN-01A 2 1 Out-of-frame Inter-chr q24.3 71454 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL8-DDX21 RPL8 chr8 146015155 - DDX21 chr10 70723858 + Exonic hg19 STAD TCGA-BR-8591-01A 2 4 Out-of-frame Inter-chr q24.3 q22.1 71455 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL8-FMN1 RPL8 chr8 146015154 - FMN1 chr15 33096533 - Exonic hg19 SKCM TCGA-EE-A29Q-06A 2 3 3'UTR-CDS Inter-chr q24.3 71456 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL8-GLG1 RPL8 chr8 146015154 - GLG1 chr16 74566051 - Exonic hg19 SKCM TCGA-EE-A2MT-06A 2 1 3'UTR-3'UTR Inter-chr q24.3 q23.1 71457 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL8-NDUFV1 RPL8 chr8 146015155 - NDUFV1 chr11 67375697 + Exonic hg19 BRCA TCGA-D8-A1XS-01A 2 11 Out-of-frame Inter-chr q24.3 q13.2 71458 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL8-NOVA1 RPL8 chr8 146015155 - NOVA1 chr14 27066692 - Exonic hg19 LGG TCGA-CS-5393-01A 2 2 Out-of-frame Inter-chr q24.3 q12 71459 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL8-SCARB1 RPL8 chr8 146015154 - SCARB1 chr12 125324217 - Exonic hg19 PRAD TCGA-EJ-5512-01A 2 1 3'UTR-CDS Inter-chr q24.3 q24.31 71460 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL8-SLC1A3 RPL8 chr8 146015155 - SLC1A3 chr5 36606541 + Exonic hg19 SARC TCGA-DX-A8BP-01A 2 1 Out-of-frame Inter-chr q24.3 p13.2 71461 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPL8-SNW1 RPL8 chr8 146015155 - SNW1 chr14 78189203 - Exonic hg19 BRCA TCGA-E9-A1RE-01A 2 6 Out-of-frame Inter-chr q24.3 q24.3 71462 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPLP1-TMEFF2 RPLP1 chr15 69748172 - TMEFF2 chr2 193059642 - Exonic hg19 PRAD TCGA-V1-A9O5-06A 2 1 Out-of-frame Inter-chr q23 q32.3 Tumor suppressor gene 71463 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPLP2-ACPP RPLP2 chr11 812874 - ACPP chr3 132036211 + Exonic hg19 PRAD TCGA-EJ-7125-01A 2 1 5'UTR-5'UTR Inter-chr p15.5 q22.1 71464 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPLP2-TALDO1 RPLP2 chr11 811645 - TALDO1 chr11 755879 + Exonic hg19 LUAD TCGA-67-3771-01A 14 20 5'UTR-CDS Intra-chr p15.5 p15.5 Seq+ 71465 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPN1-ALDOA RPN1 chr3 128338817 - ALDOA chr16 30075973 + Exonic hg19 PRAD TCGA-CH-5789-01A 2 4 Out-of-frame Inter-chr q21.3 p11.2 71466 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPN1-MAP6D1 RPN1 chr3 128363762 - MAP6D1 chr3 183535899 - Exonic hg19 KIRP TCGA-G7-6793-01A 52 26 In-Frame Intra-chr q21.3 q27.1 Seq+ 71467 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPN1-UTRN RPN1 chr3 128338817 - UTRN chr6 144665237 + Exonic hg19 LGG TCGA-HT-7854-01A 2 1 Out-of-frame Inter-chr q21.3 q24.2 71468 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPN2-ERBB3 RPN2 chr20 35870020 - ERBB3 chr12 56492035 + Exonic hg19 CESC TCGA-EA-A3HS-01A 2 17 Out-of-frame Inter-chr q11.23 q13.2 Oncogene 71469 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPN2-ZBTB46 RPN2 chr20 35858462 - ZBTB46 chr20 62422143 - Exonic hg19 UCS TCGA-N8-A4PN-01A 5 7 CDS-5'UTR Intra-chr q11.23 q13.33 Transcription factor Seq+ 71470 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPP14-ABHD6 RPP14 chr3 58296318 - ABHD6 chr3 58252916 + Exonic hg19 SKCM TCGA-EB-A4P0-01A 7 5 Out-of-frame Intra-chr p14.3 p14.3 Seq+ 71471 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPP14-FLNB RPP14 chr3 58296318 - FLNB chr3 58154167 + Exonic hg19 STAD TCGA-VQ-A8PH-01A 3 33 Out-of-frame Intra-chr p14.3 p14.3 Seq+ 71472 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPP40-LYRM4 RPP40 chr6 5004114 - LYRM4 chr6 5109725 - Exonic hg19 BRCA TCGA-A7-A4SD-01A 10 2 In-Frame Intra-chr p25.1 p25.1 Seq+ 71473 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPRD1A-CHMP2B RPRD1A chr18 33647217 - CHMP2B chr3 87294864 + Exonic hg19 SARC TCGA-DX-AB2O-01A 42 28 Out-of-frame Inter-chr q12.2 p11.2 Seq+ 71474 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPRD1A-RALGAPA2 RPRD1A chr18 33610771 - RALGAPA2 chr20 20661445 - Exonic hg19 BRCA TCGA-AO-A12F-01A 16 14 Out-of-frame Inter-chr q12.2 p11.23 Seq+ 71475 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPRD1B-ANKRD17 RPRD1B chr20 36694658 - ANKRD17 chr4 73964237 - Exonic hg19 BRCA TCGA-C8-A1HN-01A 20 8 Out-of-frame Inter-chr q11.23 q13.3 Seq+ 71476 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPRD1B-CTNNBL1 RPRD1B chr20 36694658 - CTNNBL1 chr20 36393599 + Exonic hg19 LUAD TCGA-44-5644-01A 30 17 In-Frame Intra-chr q11.23 q11.23 Seq+ 71477 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPRD1B-MEF2B RPRD1B chr20 36694658 - MEF2B chr19 19267951 - Exonic hg19 ACC TCGA-OR-A5K5-01A 9 4 Out-of-frame Inter-chr q11.23 p13.11 Transcription factor Seq+ 71478 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPRD2-BOLA1 RPRD2 chr1 150390201 - BOLA1 chr1 149871563 + Exonic hg19 LUSC TCGA-63-6202-01A 7 4 CDS-5'UTR Intra-chr q21.2 q21.2 71479 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPRD2-CA14 RPRD2 chr1 150337395 - CA14 chr1 150232546 + Exonic hg19 LUAD TCGA-55-7227-01A 2 4 In-Frame Intra-chr q21.2 q21.2 Seq+ 71480 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPRD2-CA14 RPRD2 chr1 150416853 - CA14 chr1 150232546 + Exonic hg19 BRCA TCGA-A7-A13D-01A 3 4 In-Frame Intra-chr q21.2 q21.2 Seq+ 71481 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPRD2-CA14 RPRD2 chr1 150337395 - CA14 chr1 150236993 + Exonic hg19 LIHC TCGA-G3-A6UC-01A 49 48 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 71482 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPRD2-LCE1C RPRD2 chr1 150390201 - LCE1C chr1 152777974 - Exonic hg19 SARC TCGA-DX-A1KY-01A 4 1 CDS-5'UTR Intra-chr q21.2 q21.3 Seq+ 71483 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPRD2-S100A2 RPRD2 chr1 150390201 - S100A2 chr1 153536363 - Exonic hg19 LGG TCGA-HT-7477-01B 4 1 CDS-5'UTR Intra-chr q21.2 q21.3 Tumor suppressor gene 71484 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPRD2-SHC1 RPRD2 chr1 150337395 - SHC1 chr1 154938993 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 30 49 Out-of-frame Intra-chr q21.2 q21.3 Seq+ 71485 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPRD2-VPS45 RPRD2 chr1 150418877 - VPS45 chr1 150053424 + Exonic hg19 BRCA TCGA-A7-A13D-01A 15 5 In-Frame Intra-chr q21.2 q21.2 Seq+ 71486 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS11-FLT3LG RPS11 chr19 50001303 - FLT3LG chr19 49977860 + Exonic hg19 LAML TCGA-AB-2912-03A 134 81 5'UTR-5'UTR Intra-chr q13.33 q13.33 Seq+ 71487 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS14-AP1G2 RPS14 chr5 149823794 - AP1G2 chr14 24037279 - Exonic hg19 LUAD TCGA-73-4666-01A 2 28 3'UTR-5'UTR Inter-chr q33.1 q11.2 71488 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS19-CEACAM3 RPS19 chr19 42365281 - CEACAM3 chr19 42314003 + Exonic hg19 STAD TCGA-BR-A4J1-01A 226 6641 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 71489 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS19-CEACAM5 RPS19 chr19 42365281 - CEACAM5 chr19 42231154 + Exonic hg19 LUSC TCGA-58-8387-01A 547 525 In-Frame Intra-chr q13.2 q13.2 Seq+ 71490 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS19-DMRTC2 RPS19 chr19 42365281 - DMRTC2 chr19 42354594 + Exonic hg19 BRCA TCGA-A8-A07G-01A 109 76 Out-of-frame Intra-chr q13.2 q13.2 Transcription factor Seq+ 71491 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS19BP1-KCNE1 RPS19BP1 chr22 39928400 - KCNE1 chr21 35831034 - Exonic hg19 BRCA TCGA-EW-A424-01A 15 19 CDS-5'UTR Inter-chr q13.1 q22.12 Seq+ 71492 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS5-CALD1 RPS5 chr19 58906170 - CALD1 chr7 134430218 + Exonic hg19 PRAD TCGA-CH-5771-01A 2 1 Out-of-frame Inter-chr q13.43 q33 71493 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS5-DDX21 RPS5 chr19 58906170 - DDX21 chr10 70723858 + Exonic hg19 CESC TCGA-LP-A5U2-01A 2 14 Out-of-frame Inter-chr q13.43 q22.1 71494 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6-GNB2L1 RPS6 chr9 19376283 - GNB2L1 chr5 180670914 - Exonic hg19 PRAD TCGA-EJ-7328-01A 2 1 Out-of-frame Inter-chr p22.1 Tumor suppressor gene 71495 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6-GNB2L1 RPS6 chr9 19376283 - GNB2L1 chr5 180670914 - Exonic hg19 PRAD TCGA-H9-A6BY-01A 2 3 Out-of-frame Inter-chr p22.1 Tumor suppressor gene 71496 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6-OAZ1 RPS6 chr9 19376283 - OAZ1 chr19 2269520 + Exonic hg19 PRAD TCGA-XQ-A8TA-01A 2 13 3'UTR-5'UTR Inter-chr p22.1 p13.3 71497 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KA1-LIN28A RPS6KA1 chr1 26885428 - LIN28A chr1 26751794 + Exonic hg19 LUAD TCGA-55-8085-01A 12 11 In-Frame Intra-chr p36.11 Transcription factor Seq+ 71498 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KA1-RASGRP3 RPS6KA1 chr1 26863460 - RASGRP3 chr2 33759390 + Exonic hg19 BRCA TCGA-E2-A106-01A 20 11 In-Frame Inter-chr p22.3 Seq+ 71499 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KA2-KIFC1 RPS6KA2 chr6 167040409 - KIFC1 chr6 33365806 + Exonic hg19 SARC TCGA-IE-A3OV-01A 8 3 In-Frame Intra-chr q27 Oncogene Tumor suppressor gene Seq+ 71500 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KA2-MCHR2 RPS6KA2 chr6 167271688 - MCHR2 chr6 100404050 - Exonic hg19 LGG TCGA-DU-7006-01A 9 4 CDS-5'UTR Intra-chr q27 Oncogene Tumor suppressor gene q16.2 Seq+ 71501 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KA2-PSMG4 RPS6KA2 chr6 166872937 - PSMG4 chr6 3263918 + Exonic hg19 BRCA TCGA-E2-A15D-01A 2 2 Out-of-frame Intra-chr q27 Oncogene Tumor suppressor gene p25.2 71502 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KA3-BMX RPS6KA3 chrX 20284682 - BMX chrX 15526468 + Exonic hg19 STAD TCGA-CD-8527-01A 5 10 CDS-5'UTR Intra-chr p22.12 p22.2 TK:Tec Seq+ 71503 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KA3-KDM6A RPS6KA3 chrX 20284682 - KDM6A chrX 44966655 + Exonic hg19 SARC TCGA-DX-A3UC-01A 34 33 Out-of-frame Intra-chr p22.12 p11.3 Oncogene Tumor suppressor gene Seq+ 71504 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KA3-PISD RPS6KA3 chrX 20193282 - PISD chr22 32028277 - Exonic hg19 LIHC TCGA-DD-AACA-02A 9 9 CDS-5'UTR Inter-chr p22.12 q12.2 71505 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KA4-C11orf20 RPS6KA4 chr11 64126921 - C11orf20 chr11 64070954 + Exonic hg19 SKCM TCGA-EB-A82B-01A 536 272 In-Frame Intra-chr q13.1 71506 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KA4-CCDC88B RPS6KA4 chr11 64132937 - CCDC88B chr11 64116803 + Exonic hg19 ACC TCGA-P6-A5OF-01A 8 1 In-Frame Intra-chr q13.1 q13.1 Seq+ 71507 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KA5-BMP4 RPS6KA5 chr14 91526676 - BMP4 chr14 54420118 - Exonic hg19 SKCM TCGA-D3-A2JA-06A 3 2 CDS-5'UTR Intra-chr q32.11 q22.2 Tumor suppressor gene Seq+ 71508 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KA5-C14orf132 RPS6KA5 chr14 91526676 - C14orf132 chr14 96552848 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 7 13 Out-of-frame Intra-chr q32.11 q32.2 Seq+ 71509 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KA5-ITPK1 RPS6KA5 chr14 91386550 - ITPK1 chr14 93483146 - Exonic hg19 LUSC TCGA-77-A5G6-01A 4 4 Out-of-frame Intra-chr q32.11 Seq+ 71510 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KA6-HDX RPS6KA6 chrX 83441069 - HDX chrX 83588850 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 13 15 Out-of-frame Intra-chr q21.1 Tumor suppressor gene q21.1 Transcription factor Seq+ 71511 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-EFCAB3 RPS6KB1 chr17 57970686 - EFCAB3 chr17 60460324 + Exonic hg19 BRCA TCGA-AN-A0FD-01A 25 24 Out-of-frame Intra-chr q23.1 Oncogene q23.2 Seq+ 71512 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-FKBP10 RPS6KB1 chr17 57970686 - FKBP10 chr17 39974341 + Exonic hg19 LUSC TCGA-85-8580-01A 7 1 Out-of-frame Intra-chr q23.1 Oncogene q21.2 71513 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-RNF213 RPS6KB1 chr17 57971285 - RNF213 chr17 78345674 + Exonic hg19 BRCA TCGA-AQ-A04H-01B 52 42 Out-of-frame Intra-chr q23.1 Oncogene q25.3 Oncogene Seq+ 71514 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-TEX2 RPS6KB1 chr17 57990165 - TEX2 chr17 62291602 - Exonic hg19 BRCA TCGA-A1-A0SN-01A 102 58 CDS-5'UTR Intra-chr q23.1 Oncogene q23.3 Seq+ 71515 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-TUBD1 RPS6KB1 chr17 57970686 - TUBD1 chr17 57955695 - Exonic hg19 BRCA TCGA-C8-A273-01A 19 19 In-Frame Intra-chr q23.1 Oncogene q23.1 Seq+ 71516 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 - VMP1 chr17 57886157 + Exonic hg19 OV TCGA-25-1315-01A 17 10 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71517 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57990165 - VMP1 chr17 57915656 + Exonic hg19 LUAD TCGA-49-4505-01A 71 67 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71518 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 58013902 - VMP1 chr17 57915656 + Exonic hg19 LUAD TCGA-49-AAQV-01A 11 21 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71519 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992064 - VMP1 chr17 57917129 + Exonic hg19 BLCA TCGA-4Z-AA7Q-01A 121 96 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71520 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 58007535 - VMP1 chr17 57915656 + Exonic hg19 LUAD TCGA-50-6592-01A 22 26 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71521 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 - VMP1 chr17 57886157 + Exonic hg19 LUAD TCGA-62-A46O-01A 26 28 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71522 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57990165 - VMP1 chr17 57886157 + Exonic hg19 LUAD TCGA-69-7978-01A 12 17 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71523 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 - VMP1 chr17 57915656 + Exonic hg19 LUAD TCGA-73-4676-01A 16 22 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71524 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 - VMP1 chr17 57886157 + Exonic hg19 LUSC TCGA-77-8153-01A 2 1 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71525 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 58003943 - VMP1 chr17 57917129 + Exonic hg19 LUAD TCGA-86-7711-01A 123 195 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71526 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 - VMP1 chr17 57915656 + Exonic hg19 LUAD TCGA-86-8056-01A 65 94 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71527 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992064 - VMP1 chr17 57842332 + Exonic hg19 LUAD TCGA-93-A4JQ-01A 82 44 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71528 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992064 - VMP1 chr17 57889031 + Exonic hg19 LUSC TCGA-94-8035-01A 14 11 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71529 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57987972 - VMP1 chr17 57886157 + Exonic hg19 BRCA TCGA-AC-A2BK-01A 6 8 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71530 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992064 - VMP1 chr17 57915656 + Exonic hg19 BRCA TCGA-AC-A8OP-01A 45 31 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71531 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57990165 - VMP1 chr17 57915656 + Exonic hg19 HNSC TCGA-BA-6868-01B 93 31 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71532 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992064 - VMP1 chr17 57915656 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 11 5 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71533 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 58009083 - VMP1 chr17 57895073 + Exonic hg19 CESC TCGA-C5-A7X5-01A 10 15 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71534 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992064 - VMP1 chr17 57915656 + Exonic hg19 HNSC TCGA-CQ-6218-01A 14 5 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71535 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 - VMP1 chr17 57915656 + Exonic hg19 HNSC TCGA-CR-7369-01A 65 35 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71536 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 - VMP1 chr17 57842332 + Exonic hg19 BRCA TCGA-D8-A27H-01A 10 7 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71537 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 - VMP1 chr17 57886157 + Exonic hg19 SKCM TCGA-ER-A19H-06A 115 126 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71538 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 - VMP1 chr17 57842332 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 2 2 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71539 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 - VMP1 chr17 57886157 + Exonic hg19 BLCA TCGA-HQ-A2OE-01A 27 42 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71540 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 - VMP1 chr17 57886157 + Exonic hg19 STAD TCGA-IP-7968-01A 35 234 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71541 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970686 - VMP1 chr17 57915656 + Exonic hg19 BRCA TCGA-JL-A3YW-01A 350 292 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71542 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57990165 - VMP1 chr17 57886157 + Exonic hg19 HNSC TCGA-P3-A6T4-01A 34 56 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71543 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992064 - VMP1 chr17 57915656 + Exonic hg19 BLCA TCGA-PQ-A6FI-01A 140 82 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71544 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57990165 - VMP1 chr17 57915656 + Exonic hg19 SKCM TCGA-W3-AA21-06A 16 13 Out-of-frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 71545 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB2-C10orf54 RPS6KB2 chr11 67196094 - C10orf54 chr10 73515223 - Exonic hg19 BRCA TCGA-A2-A0CL-01A 13 11 Out-of-frame Inter-chr q13.2 Seq+ 71546 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB2-PAAF1 RPS6KB2 chr11 67196711 - PAAF1 chr11 73627590 + Exonic hg19 BRCA TCGA-AN-A03Y-01A 33 13 In-Frame Intra-chr q13.2 q13.4 Seq+ 71547 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB2-PCNXL3 RPS6KB2 chr11 67196711 - PCNXL3 chr11 65385411 + Exonic hg19 HNSC TCGA-F7-7848-01A 63 29 Out-of-frame Intra-chr q13.2 Seq+ 71548 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KB2-ST3GAL2 RPS6KB2 chr11 67197066 - ST3GAL2 chr16 70422449 - Exonic hg19 BLCA TCGA-DK-A6AV-01A 20 9 Out-of-frame Inter-chr q13.2 q22.1 Seq+ 71549 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KC1-C1orf101 RPS6KC1 chr1 213277911 - C1orf101 chr1 244715624 + Exonic hg19 BRCA TCGA-BH-A203-01A 17 13 Out-of-frame Intra-chr q32.3 Seq+ 71550 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KC1-CD34 RPS6KC1 chr1 213290752 - CD34 chr1 208073348 - Exonic hg19 LUAD TCGA-50-5932-01A 30 19 In-Frame Intra-chr q32.3 q32.2 Seq+ 71551 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KC1-LYST RPS6KC1 chr1 213303232 - LYST chr1 235840919 - Exonic hg19 GBM TCGA-27-2523-01A 14 25 Out-of-frame Intra-chr q32.3 q42.3 Seq+ 71552 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KC1-SDCCAG8 RPS6KC1 chr1 213244383 - SDCCAG8 chr1 243493842 + Exonic hg19 LUAD TCGA-55-8620-01A 3 3 In-Frame Intra-chr q32.3 Seq+ 71553 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KC1-TFPI RPS6KC1 chr1 213251158 - TFPI chr2 188368497 - Exonic hg19 LUAD TCGA-91-7771-01A 3 6 CDS-5'UTR Inter-chr q32.3 q32.1 Seq+ 71554 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPS6KC1-VASH2 RPS6KC1 chr1 213349835 - VASH2 chr1 213161854 + Exonic hg19 PRAD TCGA-FC-7961-01A 12 5 Out-of-frame Intra-chr q32.3 q32.3 Seq+ 71555 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPSAP58-ZNF793 RPSAP58 chr19 23991616 - ZNF793 chr19 38013434 + Exonic hg19 SARC TCGA-DX-A8BU-01A 2 3 5'UTR-5'UTR Intra-chr p12 q13.12 Transcription factor 71556 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPTOR-ANKFN1 RPTOR chr17 78519591 - ANKFN1 chr17 54305278 + Exonic hg19 BRCA TCGA-C8-A12M-01A 4 10 In-Frame Intra-chr q25.3 q22 Seq+ 71557 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPTOR-CD163 RPTOR chr17 78599593 - CD163 chr12 7655160 - Exonic hg19 UCEC TCGA-A5-A3LP-01A 12 2 In-Frame Inter-chr q25.3 p13.31 Seq+ 71558 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPTOR-FAHD2B RPTOR chr17 78599593 - FAHD2B chr2 97757449 - Exonic hg19 UCEC TCGA-AX-A3G4-01A 3 5 CDS-5'UTR Inter-chr q25.3 q11.2 Seq+ 71559 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPTOR-GAA RPTOR chr17 78519591 - GAA chr17 78079548 + Exonic hg19 PRAD TCGA-EJ-A46G-01A 2 3 In-Frame Intra-chr q25.3 q25.3 Seq+ 71560 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPTOR-GPC3 RPTOR chr17 78519591 - GPC3 chrX 133087238 - Exonic hg19 SARC TCGA-FX-A48G-01A 11 4 Out-of-frame Inter-chr q25.3 q26.2 Tumor suppressor gene Seq+ 71561 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPTOR-IQCH RPTOR chr17 78829347 - IQCH chr15 67692452 + Exonic hg19 PRAD TCGA-KK-A8ID-01A 13 10 In-Frame Inter-chr q25.3 q23 Seq+ 71562 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPTOR-RNF213 RPTOR chr17 78617610 - RNF213 chr17 78341548 + Exonic hg19 BRCA TCGA-BH-A0DX-01A 3 1 In-Frame Intra-chr q25.3 q25.3 Oncogene 71563 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPTOR-STXBP4 RPTOR chr17 78882729 - STXBP4 chr17 53155439 + Exonic hg19 LUSC TCGA-66-2788-01A 5 1 In-Frame Intra-chr q25.3 q22 Seq+ 71564 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPTOR-TMEM105 RPTOR chr17 78617610 - TMEM105 chr17 79288281 - Exonic hg19 PRAD TCGA-EJ-5524-01A 3 1 CDS-5'UTR Intra-chr q25.3 q25.3 71565 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RPUSD3-TMEM111 RPUSD3 chr3 9883667 - TMEM111 chr3 10019130 - Exonic hg19 BLCA TCGA-UY-A78K-01A 11 9 In-Frame Intra-chr p25.3 71566 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RQCD1-ARPC2 RQCD1 chr2 219433701 - ARPC2 chr2 219103387 + Exonic hg19 UCEC TCGA-5B-A90C-01A 165 88 Out-of-frame Intra-chr q35 Seq+ 71567 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RRAGC-RHBDL2 RRAGC chr1 39317287 - RHBDL2 chr1 39377106 - Exonic hg19 UCS TCGA-N6-A4VG-01A 3 1 In-Frame Intra-chr p34.3 p34.3 Seq+ 71568 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RRAS2-FHIT RRAS2 chr11 14380309 - FHIT chr3 59908140 - Exonic hg19 PRAD TCGA-KK-A7B3-01A 63 140 In-Frame Inter-chr p15.2 p14.2 Tumor suppressor gene Seq+ 71569 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RRAS2-PSMA1 RRAS2 chr11 14380309 - PSMA1 chr11 14632697 - Exonic hg19 LIHC TCGA-FV-A496-01A 3 3 CDS-5'UTR Intra-chr p15.2 p15.2 71570 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RRBP1-ARFGEF2 RRBP1 chr20 17594323 - ARFGEF2 chr20 47615777 + Exonic hg19 PRAD TCGA-CH-5745-01A 2 2 3'UTR-CDS Intra-chr p12.1 q13.13 71571 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RRBP1-CHID1 RRBP1 chr20 17614105 - CHID1 chr11 893519 - Exonic hg19 LUAD TCGA-49-4512-01A 7 5 Out-of-frame Inter-chr p12.1 p15.5 Seq+ 71572 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RRBP1-MACROD2 RRBP1 chr20 17660644 - MACROD2 chr20 15843390 + Exonic hg19 PRAD TCGA-HC-7736-01A 143 103 5'UTR-5'UTR Intra-chr p12.1 p12.1 Seq+ 71573 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RRBP1-OVOL2 RRBP1 chr20 17639241 - OVOL2 chr20 18005596 - Exonic hg19 STAD TCGA-BR-8590-01A 11 32 Out-of-frame Intra-chr p12.1 p11.23 Transcription factor Seq+ 71574 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RRBP1-SNX5 RRBP1 chr20 17660644 - SNX5 chr20 17937681 - Exonic hg19 STAD TCGA-CG-4443-01A 7 10 5'UTR-CDS Intra-chr p12.1 p11.23 Seq+ 71575 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RRBP1-TASP1 RRBP1 chr20 17614105 - TASP1 chr20 13398168 - Exonic hg19 LUAD TCGA-50-5072-01A 9 2 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 71576 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RRBP1-TASP1 RRBP1 chr20 17614105 - TASP1 chr20 13398168 - Exonic hg19 LUAD TCGA-91-6831-01A 50 24 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 71577 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RREB1-EEF1E1 RREB1 chr6 7108293 - EEF1E1 chr6 8097700 - Exonic hg19 GBM TCGA-06-5412-01A 4 5 5'UTR-CDS Intra-chr p24.3 Transcription factor p24.3 Tumor suppressor gene Seq+ 71578 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RREB1-F13A1 RREB1 chr6 7108293 - F13A1 chr6 6318915 - Exonic hg19 LIHC TCGA-CC-A3M9-01A 12 8 5'UTR-5'UTR Intra-chr p24.3 Transcription factor p25.1 Seq+ 71579 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RREB1-GABARAPL1 RREB1 chr6 7232140 - GABARAPL1 chr12 10370662 + Exonic hg19 PRAD TCGA-G9-6353-01A 3 3 Out-of-frame Inter-chr p24.3 Transcription factor p13.2 Seq+ 71580 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RREB1-GPX6 RREB1 chr6 7108293 - GPX6 chr6 28474206 - Exonic hg19 BRCA TCGA-AR-A2LR-01A 8 4 5'UTR-CDS Intra-chr p24.3 Transcription factor Seq+ 71581 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RREB1-LYRM4 RREB1 chr6 7189555 - LYRM4 chr6 5216971 - Exonic hg19 LGG TCGA-FG-6690-01A 6 1 In-Frame Intra-chr p24.3 Transcription factor p25.1 71582 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RREB1-WRAP53 RREB1 chr6 7108293 - WRAP53 chr17 7591966 + Exonic hg19 PRAD TCGA-ZG-A9LU-01A 6 7 5'UTR-5'UTR Inter-chr p24.3 Transcription factor p13.1 Seq+ 71583 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RRM1-STIM1 RRM1 chr11 4116261 - STIM1 chr11 4107707 + Exonic hg19 BRCA TCGA-EW-A3U0-01A 48 23 3'UTR-CDS Intra-chr p15.4 Oncogene p15.4 Seq+ 71584 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RRM2-RREB1 RRM2 chr2 10269281 - RREB1 chr6 7176888 + Exonic hg19 BRCA TCGA-AN-A0FX-01A 2 3 CDS-5'UTR Inter-chr p25.1 p24.3 Transcription factor Seq+ 71585 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RRM2B-ZFPM2 RRM2B chr8 103231042 - ZFPM2 chr8 106431372 + Exonic hg19 BRCA TCGA-GI-A2C8-01A 4 4 Out-of-frame Intra-chr q22.3 q22.3 Transcription factor Seq+ 71586 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RRM2B-ZNF704 RRM2B chr8 103231042 - ZNF704 chr8 81555364 - Exonic hg19 LUSC TCGA-77-8009-01A 21 27 In-Frame Intra-chr q22.3 q21.13 Transcription factor Seq+ 71587 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RRNAD1-ARNT RRNAD1 chr1 156699007 - ARNT chr1 150790506 - Exonic hg19 BRCA TCGA-OL-A5D8-01A 23 7 Out-of-frame Intra-chr q23.1 q21.3 Oncogene Transcription factor Seq+ 71588 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RRNAD1-CTSS RRNAD1 chr1 156699007 - CTSS chr1 150730456 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 13 5 In-Frame Intra-chr q23.1 q21.3 Seq+ 71589 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RRP12-CRTAC1 RRP12 chr10 99132803 - CRTAC1 chr10 99771094 - Exonic hg19 BRCA TCGA-AN-A0AJ-01A 15 13 In-Frame Intra-chr q24.1 q24.2 Seq+ 71590 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RRP12-EXOSC1 RRP12 chr10 99160062 - EXOSC1 chr10 99197507 - Exonic hg19 LUSC TCGA-66-2766-01A 88 36 In-Frame Intra-chr q24.1 q24.1 Seq+ 71591 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RRP1B-C21orf70 RRP1B chr21 45110321 - C21orf70 chr21 46363599 + Exonic hg19 PRAD TCGA-CH-5745-01A 16 9 Out-of-frame Intra-chr q22.3 71592 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RRP7A-PACSIN2 RRP7A chr22 42914011 - PACSIN2 chr22 43275175 - Exonic hg19 ACC TCGA-PK-A5HB-01A 79 36 In-Frame Intra-chr q13.2 q13.2 Seq+ 71593 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RSBN1-PTPN22 RSBN1 chr1 114354332 - PTPN22 chr1 114362276 - Exonic hg19 CESC TCGA-C5-A3HD-01B 1766 1227 In-Frame Intra-chr p13.2 p13.2 Seq+ 71594 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RSBN1L-HGF RSBN1L chr7 77326372 - HGF chr7 81374436 - Exonic hg19 SKCM TCGA-EB-A5SE-01A 30 14 In-Frame Intra-chr q11.23 q21.11 Oncogene Seq+ 71595 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RSF1-ADAM2 RSF1 chr11 77458081 - ADAM2 chr8 39607263 - Exonic hg19 BRCA TCGA-XX-A899-01A 20 22 In-Frame Inter-chr q14.1 Seq+ 71596 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RSF1-ARRB1 RSF1 chr11 77383087 - ARRB1 chr11 75001083 - Exonic hg19 SKCM TCGA-FS-A1ZT-06A 9 12 Out-of-frame Intra-chr q14.1 q13.4 Seq+ 71597 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RSF1-HSPA13 RSF1 chr11 77531574 - HSPA13 chr21 15753864 - Exonic hg19 BRCA TCGA-AN-A03X-01A 2 21 In-Frame Inter-chr q14.1 q11.2 71598 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RSF1-INTS4 RSF1 chr11 77531574 - INTS4 chr11 77639593 - Exonic hg19 LUSC TCGA-60-2726-01A 3 1 In-Frame Intra-chr q14.1 q14.1 Seq+ 71599 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RSF1-INTS4 RSF1 chr11 77531574 - INTS4 chr11 77594998 - Exonic hg19 SKCM TCGA-EB-A57M-01A 13 3 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 71600 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RSF1-KCTD21 RSF1 chr11 77531574 - KCTD21 chr11 77885629 - Exonic hg19 OV TCGA-20-1684-01A 4 1 CDS-5'UTR Intra-chr q14.1 q14.1 Seq+ 71601 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RSF1-KLC2 RSF1 chr11 77531574 - KLC2 chr11 66030285 + Exonic hg19 LGG TCGA-HT-7686-01A 5 4 In-Frame Intra-chr q14.1 q13.2 Seq+ 71602 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RSF1-NARS2 RSF1 chr11 77531574 - NARS2 chr11 78154804 - Exonic hg19 SKCM TCGA-YG-AA3P-06A 32 17 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 71603 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RSF1-ODZ4 RSF1 chr11 77531574 - ODZ4 chr11 78449615 - Exonic hg19 HNSC TCGA-BA-A8YP-01A 2 5 Out-of-frame Intra-chr q14.1 71604 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RSF1-ODZ4 RSF1 chr11 77436590 - ODZ4 chr11 78567223 - Exonic hg19 BRCA TCGA-BH-A0EB-01A 4 4 In-Frame Intra-chr q14.1 71605 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RSF1-PHF12 RSF1 chr11 77531574 - PHF12 chr17 27254081 - Exonic hg19 BRCA TCGA-A1-A0SM-01A 4 2 Out-of-frame Inter-chr q14.1 q11.2 Seq+ 71606 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RSF1-PRRC2C RSF1 chr11 77396150 - PRRC2C chr1 171535372 + Exonic hg19 SARC TCGA-DX-A3U5-01A 27 24 In-Frame Inter-chr q14.1 q24.3 Seq+ 71607 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RSF1-TRPC6 RSF1 chr11 77475643 - TRPC6 chr11 101375529 - Exonic hg19 SKCM TCGA-GN-A26D-06A 14 14 Out-of-frame Intra-chr q14.1 q22.1 Seq+ 71608 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RSL24D1-RAB27A RSL24D1 chr15 55489008 - RAB27A chr15 55527154 - Exonic hg19 LUAD TCGA-44-7660-01A 9 6 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 71609 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RSPH3-NOTCH4 RSPH3 chr6 159420467 - NOTCH4 chr6 32171659 - Exonic hg19 SARC TCGA-DX-A23Z-01A 6 10 Out-of-frame Intra-chr q25.3 Oncogene Seq+ 71610 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RSPRY1-OGFOD1 RSPRY1 chr16 57220962 - OGFOD1 chr16 56500064 + Exonic hg19 STAD TCGA-CG-4477-01A 3 2 5'UTR-CDS Intra-chr q13 q13 71611 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RSRC1-FAM190A RSRC1 chr3 158015864 - FAM190A chr4 92007101 + Exonic hg19 ESCA TCGA-VR-A8EU-01A 2 6 In-Frame Inter-chr q25.32 Seq+ 71612 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RSRC1-NLGN1 RSRC1 chr3 158072697 - NLGN1 chr3 173525470 + Exonic hg19 LUAD TCGA-55-8092-01A 2 4 In-Frame Intra-chr q25.32 q26.31 71613 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RSRC2-SBNO1 RSRC2 chr12 122992765 - SBNO1 chr12 123834988 - Exonic hg19 LUAD TCGA-05-4427-01A 8 4 CDS-5'UTR Intra-chr q24.31 q24.31 71614 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RSU1-BAALC RSU1 chr10 16858972 - BAALC chr8 104225147 + Exonic hg19 BLCA TCGA-LC-A66R-01A 22 16 In-Frame Inter-chr p13 q22.3 Seq+ 71615 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RSU1-FANCI RSU1 chr10 16858972 - FANCI chr15 89816608 + Exonic hg19 SARC TCGA-DX-A1L4-01A 12 10 Out-of-frame Inter-chr p13 q26.1 Seq+ 71616 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RSU1-LARP4B RSU1 chr10 16858972 - LARP4B chr10 863829 - Exonic hg19 CHOL TCGA-W5-AA2U-01A 6 9 Out-of-frame Intra-chr p13 p15.3 Seq+ 71617 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RTKN-C2orf65 RTKN chr2 74666678 - C2orf65 chr2 74808974 - Exonic hg19 LGG TCGA-QH-A6CW-01A 45 13 Out-of-frame Intra-chr p13.1 71618 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RTKN-CTF1 RTKN chr2 74668833 - CTF1 chr16 30910736 + Exonic hg19 LUSC TCGA-NC-A5HN-01A 15 3 Out-of-frame Inter-chr p13.1 p11.2 Seq+ 71619 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RTN3-CSMD1 RTN3 chr11 63449250 - CSMD1 chr8 3855632 - Exonic hg19 BRCA TCGA-AC-A2QH-01B 2 11 In-Frame Inter-chr q13.1 p23.2 Tumor suppressor gene Seq+ 71620 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RTN3-HRASLS5 RTN3 chr11 63449250 - HRASLS5 chr11 63233844 - Exonic hg19 LUAD TCGA-91-6831-01A 6 2 In-Frame Intra-chr q13.1 q12.3 Seq+ 71621 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RTN3-SLC22A9 RTN3 chr11 63449250 - SLC22A9 chr11 63173969 + Exonic hg19 STAD TCGA-BR-8373-01A 2 10 Out-of-frame Intra-chr q13.1 q12.3 Seq+ 71622 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RTN3-SLC22A9 RTN3 chr11 63449250 - SLC22A9 chr11 63175584 + Exonic hg19 STAD TCGA-CG-4449-01A 6 14 In-Frame Intra-chr q13.1 q12.3 Seq+ 71623 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RTN4-MITD1 RTN4 chr2 55276881 - MITD1 chr2 99790479 - Exonic hg19 LUSC TCGA-66-2756-01A 21 17 In-Frame Intra-chr p16.1 Tumor suppressor gene q11.2 Seq+ 71624 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RTN4R-DNAH2 RTN4R chr22 20255594 - DNAH2 chr17 7719889 + Exonic hg19 LUSC TCGA-96-A4JK-01A 5 4 Out-of-frame Inter-chr q11.21 p13.1 Seq+ 71625 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RTN4R-TMEM22 RTN4R chr22 20255594 - TMEM22 chr3 136573285 + Exonic hg19 LUSC TCGA-43-6770-01A 5 5 Out-of-frame Inter-chr q11.21 71626 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RTN4RL2-P2RX3 RTN4RL2 chr11 57235563 - P2RX3 chr11 57135483 + Exonic hg19 SARC TCGA-FX-A3TO-01A 8 2 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 71627 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RTTN-MAPK4 RTTN chr18 67866650 - MAPK4 chr18 48189459 + Exonic hg19 GBM TCGA-06-5413-01A 3 2 CDS-5'UTR Intra-chr q22.2 q21.1 Seq+ 71628 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RUNDC1-RGS9 RUNDC1 chr17 41142453 - RGS9 chr17 63223393 + Exonic hg19 CESC TCGA-4J-AA1J-01A 21 17 Out-of-frame Intra-chr q21.31 q24.1 Seq+ 71629 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RUNDC2A-NCAN RUNDC2A chr16 12121301 - NCAN chr19 19344598 + Exonic hg19 BLCA TCGA-GV-A3JW-01A 13 14 Out-of-frame Inter-chr p13.11 71630 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RUNX1-CEP76 RUNX1 chr21 36206707 - CEP76 chr18 12686449 - Exonic hg19 LUAD TCGA-O1-A52J-01A 12 11 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor p11.21 Seq+ 71631 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RUNX1-DTD1 RUNX1 chr21 36252854 - DTD1 chr20 18724744 + Exonic hg19 BRCA TCGA-C8-A8HR-01A 32 20 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor p11.23 Seq+ 71632 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RUNX1-IFNAR1 RUNX1 chr21 36206707 - IFNAR1 chr21 34725064 + Exonic hg19 SKCM TCGA-DA-A3F5-06A 25 5 Out-of-frame Intra-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q22.11 Seq+ 71633 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RUNX1-MECOM RUNX1 chr21 36206707 - MECOM chr3 169099312 - Exonic hg19 LAML TCGA-AB-2915-03A 45 41 In-Frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q26.2 Transcription factor KB Pub Seq+ 71634 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RUNX1-PROS1 RUNX1 chr21 36206707 - PROS1 chr3 93646251 - Exonic hg19 COAD TCGA-A6-6654-01A 16 15 In-Frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q11.1 Seq+ 71635 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RUNX1-RUNX1T1 RUNX1 chr21 36231771 - RUNX1T1 chr8 93029591 - Exonic hg19 LAML TCGA-AB-2806-03A 304 140 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q21.3 Oncogene KB Pub Seq+ 71636 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RUNX1-RUNX1T1 RUNX1 chr21 36231771 - RUNX1T1 chr8 93029591 - Exonic hg19 LAML TCGA-AB-2819-03A 90 64 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q21.3 Oncogene KB Pub Seq+ 71637 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RUNX1-RUNX1T1 RUNX1 chr21 36231771 - RUNX1T1 chr8 93029591 - Exonic hg19 LAML TCGA-AB-2858-03A 210 68 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q21.3 Oncogene KB Pub Seq+ 71638 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RUNX1-RUNX1T1 RUNX1 chr21 36231771 - RUNX1T1 chr8 93029591 - Exonic hg19 LAML TCGA-AB-2875-03A 252 139 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q21.3 Oncogene KB Pub Seq+ 71639 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RUNX1-RUNX1T1 RUNX1 chr21 36231771 - RUNX1T1 chr8 93029591 - Exonic hg19 LAML TCGA-AB-2886-03A 337 182 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q21.3 Oncogene KB Pub Seq+ 71640 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RUNX1-RUNX1T1 RUNX1 chr21 36231771 - RUNX1T1 chr8 93029591 - Exonic hg19 LAML TCGA-AB-2937-03A 125 116 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q21.3 Oncogene KB Pub Seq+ 71641 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RUNX1-RUNX1T1 RUNX1 chr21 36231771 - RUNX1T1 chr8 93029591 - Exonic hg19 LAML TCGA-AB-2950-03A 339 127 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q21.3 Oncogene KB Pub Seq+ 71642 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RUNX1-ZMAT4 RUNX1 chr21 36259140 - ZMAT4 chr8 40532450 - Exonic hg19 COAD TCGA-A6-A56B-01A 5 4 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor p11.21 Transcription factor Seq+ 71643 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RUNX1T1-E2F5 RUNX1T1 chr8 93115085 - E2F5 chr8 86114382 + Exonic hg19 SARC TCGA-DX-A3M1-01A 2 1 Out-of-frame Intra-chr q21.3 Oncogene q21.2 Transcription factor Seq+ 71644 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RUNX1T1-FAM164A RUNX1T1 chr8 93088193 - FAM164A chr8 79590798 + Exonic hg19 ESCA TCGA-2H-A9GG-01A 24 220 Out-of-frame Intra-chr q21.3 Oncogene 71645 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RUNX1T1-RUNX1 RUNX1T1 chr8 93074774 - RUNX1 chr21 36231875 - Exonic hg19 LAML TCGA-AB-2875-03A 2 2 In-Frame Inter-chr q21.3 Oncogene q22.12 Oncogene Tumor suppressor gene Transcription factor KB 71646 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RUNX2-IFT88 RUNX2 chr6 45459851 - IFT88 chr13 21264844 + Exonic hg19 BRCA TCGA-BH-A18V-01A 39 19 In-Frame Inter-chr p21.1 Tumor suppressor gene Transcription factor q12.11 Tumor suppressor gene Seq+ 71647 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RUNX2-IFT88 RUNX2 chr6 45459851 - IFT88 chr13 21264844 + Exonic hg19 BRCA TCGA-BH-A18V-06A 10 5 In-Frame Inter-chr p21.1 Tumor suppressor gene Transcription factor q12.11 Tumor suppressor gene Seq+ 71648 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RUNX2-MAX RUNX2 chr6 45399756 - MAX chr14 65544754 - Exonic hg19 HNSC TCGA-CN-5367-01A 5 2 Out-of-frame Inter-chr p21.1 Tumor suppressor gene Transcription factor q23.3 Oncogene Tumor suppressor gene Transcription factor Seq+ 71649 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RUSC1-TYK2 RUSC1 chr1 155300903 - TYK2 chr19 10491352 - Exonic hg19 THCA TCGA-EM-A3O6-01A 2 5 Out-of-frame Inter-chr q22 p13.2 TK:JakA 71650 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RUSC2-ABAT RUSC2 chr9 35490169 - ABAT chr16 8857926 + Exonic hg19 LGG TCGA-CS-5397-01A 18 59 5'UTR-CDS Inter-chr p13.3 p13.2 Seq+ 71651 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RUSC2-SHB RUSC2 chr9 35490169 - SHB chr9 38016128 - Exonic hg19 BLCA TCGA-XF-A9T4-01A 3 5 5'UTR-CDS Intra-chr p13.3 p13.1 71652 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RWDD1-C6orf204 RWDD1 chr6 116906020 - C6orf204 chr6 118845083 - Exonic hg19 SARC TCGA-SG-A6Z7-01A 10 6 Out-of-frame Intra-chr q22.1 71653 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RWDD1-FAM26D RWDD1 chr6 116906020 - FAM26D chr6 116878988 + Exonic hg19 LUSC TCGA-77-A5GH-01A 3 2 In-Frame Intra-chr q22.1 q22.1 Seq+ 71654 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RWDD1-WASF1 RWDD1 chr6 116892818 - WASF1 chr6 110448832 - Exonic hg19 BRCA TCGA-E9-A1RF-01A 56 33 5'UTR-5'UTR Intra-chr q22.1 q21 Seq+ 71655 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RWDD2B-MX2 RWDD2B chr21 30391532 - MX2 chr21 42762492 + Exonic hg19 BLCA TCGA-K4-A5RI-01A 17 12 Out-of-frame Intra-chr q21.3 q22.3 Seq+ 71656 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RWDD3-CCDC18 RWDD3 chr1 95705465 - CCDC18 chr1 93711662 + Exonic hg19 BRCA TCGA-A2-A04U-01A 9 7 5'UTR-CDS Intra-chr p21.3 p22.1 Seq+ 71657 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RWDD3-TMEM56 RWDD3 chr1 95699871 - TMEM56 chr1 95639372 + Exonic hg19 BRCA TCGA-A8-A07L-01A 3 1 Out-of-frame Intra-chr p21.3 p21.3 71658 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RXRA-ALG9 RXRA chr9 137218505 - ALG9 chr11 111657244 - Exonic hg19 LIHC TCGA-BC-A10Y-01A 161 277 Out-of-frame Inter-chr q34.2 Transcription factor q23.1 Seq+ 71659 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RXRA-BCAS3 RXRA chr9 137218505 - BCAS3 chr17 58945937 + Exonic hg19 CESC TCGA-C5-A8XH-01A 3 5 Out-of-frame Inter-chr q34.2 Transcription factor q23.2 Seq+ 71660 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RXRA-KCNT2 RXRA chr9 137218505 - KCNT2 chr1 196461471 - Exonic hg19 LIHC TCGA-2Y-A9H0-01A 7 14 Out-of-frame Inter-chr q34.2 Transcription factor q31.3 Seq+ 71661 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RXRA-PRRC2B RXRA chr9 137313651 - PRRC2B chr9 134305477 + Exonic hg19 HNSC TCGA-D6-8569-01A 7 3 CDS-5'UTR Intra-chr q34.2 Transcription factor q34.13 Seq+ 71662 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RXRA-WDR5 RXRA chr9 137218505 - WDR5 chr9 137017105 + Exonic hg19 LIHC TCGA-2Y-A9GZ-01A 35 118 Out-of-frame Intra-chr q34.2 Transcription factor q34.2 Seq+ 71663 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RXRG-FAM78B RXRG chr1 165386278 - FAM78B chr1 166040000 - Exonic hg19 SKCM TCGA-EE-A2ML-06A 12 6 Out-of-frame Intra-chr q23.3 Transcription factor q24.1 Seq+ 71664 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RYBP-CNTN4 RYBP chr3 72495647 - CNTN4 chr3 2777899 + Exonic hg19 PRAD TCGA-G9-6339-01A 9 3 Out-of-frame Intra-chr p26.3 Seq+ 71665 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RYBP-FHIT RYBP chr3 72495647 - FHIT chr3 59738047 - Exonic hg19 THYM TCGA-4V-A9QJ-01A 754 534 Out-of-frame Intra-chr p14.2 Tumor suppressor gene Seq+ 71666 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RYBP-FHIT RYBP chr3 72495647 - FHIT chr3 59738047 - Exonic hg19 PRAD TCGA-KK-A8IJ-01A 3 3 Out-of-frame Intra-chr p14.2 Tumor suppressor gene Seq+ 71667 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RYBP-TADA3 RYBP chr3 72495647 - TADA3 chr3 9833177 - Exonic hg19 BRCA TCGA-C8-A12L-01A 53 35 CDS-5'UTR Intra-chr p25.3 Seq+ 71668 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RYK-KALRN RYK chr3 133907681 - KALRN chr3 124149503 + Exonic hg19 PRAD TCGA-KK-A6E1-01A 102 70 Out-of-frame Intra-chr q22.2 TK:Ryk q21.1 Seq+ 71669 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RYK-RABL3 RYK chr3 133921574 - RABL3 chr3 120417420 - Exonic hg19 BRCA TCGA-BH-A0DL-01A 20 20 Out-of-frame Intra-chr q22.2 TK:Ryk q13.33 Seq+ 71670 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RYR1-ZNF383 RYR1 chr19 39068844 - ZNF383 chr19 37733371 + Exonic hg19 UCEC TCGA-KP-A3VZ-01A 54 26 Out-of-frame Intra-chr q13.2 q13.12 Transcription factor Seq+ 71671 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RYR2-GPR137B RYR2 chr1 237780786 - GPR137B chr1 236368426 + Exonic hg19 BRCA TCGA-A8-A07C-01A 3 2 5'UTR-CDS Intra-chr q43 q42.3 Seq+ 71672 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RYR2-WLS RYR2 chr1 237205869 - WLS chr1 68659910 - Exonic hg19 LGG TCGA-DU-6542-01A 2 11 5'UTR-CDS Intra-chr q43 p31.3 Seq+ 71673 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RYR3-AVEN RYR3 chr15 34049797 - AVEN chr15 34168196 - Exonic hg19 LUSC TCGA-43-8116-01A 8 4 Out-of-frame Intra-chr q13.3 q14 71674 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RYR3-BUB1B RYR3 chr15 33765739 - BUB1B chr15 40457254 + Exonic hg19 LGG TCGA-E1-A7YL-01A 6 6 Out-of-frame Intra-chr q13.3 q15.1 Oncogene Seq+ 71675 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq RYR3-LARP4 RYR3 chr15 34034645 - LARP4 chr12 50821545 + Exonic hg19 BRCA TCGA-BH-A5IZ-01A 10 8 In-Frame Inter-chr q13.3 q13.12 Seq+ 71676 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A13-GBA S100A13 chr1 153598796 - GBA chr1 155210971 - Exonic hg19 LIHC TCGA-KR-A7K8-01A 2 4 CDS-5'UTR Intra-chr q21.3 Seq+ 71677 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A2-CHD1 S100A2 chr1 153533819 - CHD1 chr5 98219587 - Exonic hg19 HNSC TCGA-CR-7373-01A 2 5 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q21.1 Tumor suppressor gene 71678 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A2-CXCR5 S100A2 chr1 153533819 - CXCR5 chr11 118754475 + Exonic hg19 HNSC TCGA-CV-5978-01A 2 9 3'UTR-5'UTR Inter-chr q21.3 Tumor suppressor gene q23.3 71679 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A2-DDX21 S100A2 chr1 153533819 - DDX21 chr10 70723858 + Exonic hg19 BLCA TCGA-C4-A0F1-01A 2 3 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q22.1 71680 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A2-FXYD3 S100A2 chr1 153533819 - FXYD3 chr19 35612126 + Exonic hg19 HNSC TCGA-D6-A4ZB-01A 2 2 3'UTR-CDS Inter-chr q21.3 Tumor suppressor gene q13.12 71681 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A2-NDUFV1 S100A2 chr1 153533819 - NDUFV1 chr11 67375697 + Exonic hg19 CESC TCGA-C5-A1M8-01A 2 10 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q13.2 71682 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A2-RPL30 S100A2 chr1 153533816 - RPL30 chr8 99058697 - Exonic hg19 HNSC TCGA-BA-A6DL-01A 2 1 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q22.2 71683 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A2-RPL30 S100A2 chr1 153533816 - RPL30 chr8 99058697 - Exonic hg19 HNSC TCGA-CN-5369-01A 2 2 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q22.2 71684 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A2-RPL30 S100A2 chr1 153533816 - RPL30 chr8 99058697 - Exonic hg19 HNSC TCGA-CV-7434-01A 2 4 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q22.2 71685 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A4-ELK3 S100A4 chr1 153516097 - ELK3 chr12 96588323 + Exonic hg19 SKCM TCGA-DA-A1I1-06A 2 8 Out-of-frame Inter-chr q21.3 q23.1 Transcription factor 71686 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A6-ABCF1 S100A6 chr1 153507075 - ABCF1 chr6 30545853 + Exonic hg19 LUAD TCGA-44-7670-01A 2 1 3'UTR-CDS Inter-chr q21.3 71687 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A6-BCL7A S100A6 chr1 153507075 - BCL7A chr12 122473237 + Exonic hg19 THCA TCGA-EL-A4KG-01A 2 3 3'UTR-CDS Inter-chr q21.3 71688 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A6-CD40 S100A6 chr1 153507075 - CD40 chr20 44754189 + Exonic hg19 KIRP TCGA-BQ-7049-01A 2 44 Out-of-frame Inter-chr q21.3 q13.12 71689 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A6-COL6A1 S100A6 chr1 153507075 - COL6A1 chr21 47407069 + Exonic hg19 LUAD TCGA-NJ-A4YP-01A 2 3 3'UTR-CDS Inter-chr q21.3 q22.3 71690 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A6-DDX27 S100A6 chr1 153507075 - DDX27 chr20 47849303 + Exonic hg19 ACC TCGA-OR-A5JB-01A 2 670 Out-of-frame Inter-chr q21.3 q13.13 71691 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A6-ERBB3 S100A6 chr1 153507075 - ERBB3 chr12 56492035 + Exonic hg19 PAAD TCGA-HZ-7924-01A 2 174 Out-of-frame Inter-chr q21.3 q13.2 Oncogene 71692 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A6-PLEKHB2 S100A6 chr1 153507075 - PLEKHB2 chr2 131876464 + Exonic hg19 LUSC TCGA-85-A50M-01A 2 147 Out-of-frame Inter-chr q21.3 q21.1 71693 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A6-PLEKHB2 S100A6 chr1 153507075 - PLEKHB2 chr2 131876464 + Exonic hg19 THCA TCGA-BJ-A45I-01A 2 554 Out-of-frame Inter-chr q21.3 q21.1 71694 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A6-PLEKHB2 S100A6 chr1 153507075 - PLEKHB2 chr2 131876464 + Exonic hg19 THCA TCGA-CE-A483-01A 2 292 Out-of-frame Inter-chr q21.3 q21.1 71695 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A6-THSD4 S100A6 chr1 153507075 - THSD4 chr15 72072881 + Exonic hg19 SARC TCGA-IW-A3M6-01A 2 160 Out-of-frame Inter-chr q21.3 q23 71696 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A8-CCT5 S100A8 chr1 153362508 - CCT5 chr5 10250033 + Exonic hg19 CESC TCGA-VS-A8QF-01A 2 212 3'UTR-5'UTR Inter-chr q21.3 p15.2 71697 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A8-FADS2 S100A8 chr1 153362508 - FADS2 chr11 61588853 + Exonic hg19 LUSC TCGA-77-7337-01A 2 1 3'UTR-5'UTR Inter-chr q21.3 q12.2 71698 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A8-MYO6 S100A8 chr1 153362508 - MYO6 chr6 76595721 + Exonic hg19 HNSC TCGA-CV-7183-01A 2 1 3'UTR-CDS Inter-chr q21.3 q14.1 71699 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A8-SUPT16H S100A8 chr1 153362508 - SUPT16H chr14 21829491 - Exonic hg19 HNSC TCGA-CV-5970-01A 2 2 3'UTR-CDS Inter-chr q21.3 q11.2 71700 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A8-TNNT1 S100A8 chr1 153362508 - TNNT1 chr19 55646910 - Exonic hg19 ESCA TCGA-IG-A5B8-01A 2 3 3'UTR-CDS Inter-chr q21.3 q13.42 71701 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A9-FOXP1 S100A9 chr1 153333503 - FOXP1 chr3 71007472 - Exonic hg19 CESC TCGA-ZJ-AAX8-01A 2 4 Out-of-frame Inter-chr q21.3 p13 Oncogene Tumor suppressor gene Transcription factor 71702 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A9-NDUFV1 S100A9 chr1 153333503 - NDUFV1 chr11 67375697 + Exonic hg19 CESC TCGA-EK-A2PL-01A 2 11 Out-of-frame Inter-chr q21.3 q13.2 71703 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A9-PLAT S100A9 chr1 153333503 - PLAT chr8 42051245 - Exonic hg19 CESC TCGA-VS-A958-01A 2 44 Out-of-frame Inter-chr q21.3 p11.21 71704 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100A9-TCOF1 S100A9 chr1 153333503 - TCOF1 chr5 149777917 + Exonic hg19 CESC TCGA-MA-AA3X-01A 2 1 3'UTR-CDS Inter-chr q21.3 q32 71705 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100B-TCTN1 S100B chr21 48018875 - TCTN1 chr12 111082513 + Exonic hg19 SKCM TCGA-GN-A263-01A 2 1 Out-of-frame Inter-chr q22.3 q24.11 71706 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S100P-CHD1 S100P chr4 6698896 - CHD1 chr5 98219587 - Exonic hg19 BRCA TCGA-AR-A1AK-01A 2 47 Out-of-frame Inter-chr p16.1 q21.1 Tumor suppressor gene 71707 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq S1PR2-RAVER1 S1PR2 chr19 10341880 - RAVER1 chr19 10429916 - Exonic hg19 LUAD TCGA-69-7979-01A 9 12 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 71708 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAC3D1-SNX15 SAC3D1 chr11 64809338 - SNX15 chr11 64807158 + Exonic hg19 OV TCGA-13-1511-01A 28 23 In-Frame Intra-chr q13.1 q13.1 Seq+ 71709 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SACM1L-ANAPC13 SACM1L chr3 45730989 - ANAPC13 chr3 134201773 - Exonic hg19 BRCA TCGA-BH-A18P-01A 11 91 CDS-5'UTR Intra-chr p21.31 q22.2 Seq+ 71710 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SACM1L-CXorf31 SACM1L chr3 45730989 - CXorf31 chrX 46754016 - Exonic hg19 BRCA TCGA-A1-A0SO-01A 9 26 CDS-3'UTR Inter-chr p21.31 Seq+ 71711 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SACM1L-LIMD1 SACM1L chr3 45730989 - LIMD1 chr3 45707142 + Exonic hg19 BRCA TCGA-AN-A0AT-01A 9 31 Out-of-frame Intra-chr p21.31 p21.31 Tumor suppressor gene Seq+ 71712 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SACS-MIPEP SACS chr13 23985359 - MIPEP chr13 24415627 - Exonic hg19 LUSC TCGA-46-3767-01A 13 8 In-Frame Intra-chr q12.12 q12.12 Seq+ 71713 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SACS-MYO16 SACS chr13 23985359 - MYO16 chr13 109831890 + Exonic hg19 SARC TCGA-PC-A5DM-01A 5 3 Out-of-frame Intra-chr q12.12 Seq+ 71714 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SACS-PHF3 SACS chr13 23932474 - PHF3 chr6 64487959 + Exonic hg19 HNSC TCGA-CV-7248-01A 4 5 CDS-3'UTR Inter-chr q12.12 q12 Seq+ 71715 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAE1-ARHGAP35 SAE1 chr19 47673180 - ARHGAP35 chr19 47491246 + Exonic hg19 STAD TCGA-BR-8289-01A 8 24 In-Frame Intra-chr q13.32 q13.32 Transcription factor Seq+ 71716 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAE1-BAX SAE1 chr19 47646862 - BAX chr19 49464067 + Exonic hg19 PRAD TCGA-EJ-5532-01A 78 49 In-Frame Intra-chr q13.32 q13.33 Tumor suppressor gene Seq+ 71717 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAE1-FGF9 SAE1 chr19 47646862 - FGF9 chr13 22275329 + Exonic hg19 COAD TCGA-D5-6533-01A 4 3 In-Frame Inter-chr q13.32 q12.11 Seq+ 71718 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAE1-GRIN2D SAE1 chr19 47634285 - GRIN2D chr19 48945026 + Exonic hg19 READ TCGA-AG-3731-01A 24 14 In-Frame Intra-chr q13.32 q13.33 Seq+ 71719 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAE1-HAS1 SAE1 chr19 47634285 - HAS1 chr19 52223148 - Exonic hg19 SARC TCGA-DX-A8BU-01A 44 14 Out-of-frame Intra-chr q13.32 q13.41 Seq+ 71720 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAE1-RPA2 SAE1 chr19 47658470 - RPA2 chr1 28233793 - Exonic hg19 UCEC TCGA-B5-A3S1-01A 7 6 In-Frame Inter-chr q13.32 p35.3 Seq+ 71721 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAE1-WDR18 SAE1 chr19 47658470 - WDR18 chr19 994212 + Exonic hg19 KIRC TCGA-CZ-5468-01A 78 46 In-Frame Intra-chr q13.32 p13.3 Seq+ 71722 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAE1-ZBTB45 SAE1 chr19 47646862 - ZBTB45 chr19 59029040 - Exonic hg19 BRCA TCGA-C8-A26Z-01A 12 13 5'UTR-5'UTR Intra-chr q13.32 q13.43 Transcription factor Seq+ 71723 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAFB-ARRDC5 SAFB chr19 5645410 - ARRDC5 chr19 4891585 - Exonic hg19 LIHC TCGA-EP-A2KA-01A 2 1 In-Frame Intra-chr p13.3 Tumor suppressor gene Transcription factor p13.3 71724 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAFB-RFX2 SAFB chr19 5626500 - RFX2 chr19 6047515 - Exonic hg19 OV TCGA-OY-A56P-01A 5 29 5'UTR-5'UTR Intra-chr p13.3 Tumor suppressor gene Transcription factor p13.3 Transcription factor Seq+ 71725 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAFB2-AP2A1 SAFB2 chr19 5598804 - AP2A1 chr19 50295192 + Exonic hg19 SKCM TCGA-D3-A2JN-06A 2 2 Out-of-frame Intra-chr p13.3 Tumor suppressor gene Transcription factor q13.33 Seq+ 71726 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAFB2-KHSRP SAFB2 chr19 5616143 - KHSRP chr19 6418090 - Exonic hg19 PRAD TCGA-EJ-5515-01A 4 2 In-Frame Intra-chr p13.3 Tumor suppressor gene Transcription factor p13.3 Seq+ 71727 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAFB2-LONP1 SAFB2 chr19 5621320 - LONP1 chr19 5692219 - Exonic hg19 TGCT TCGA-2G-AAFL-01A 12 8 Out-of-frame Intra-chr p13.3 Tumor suppressor gene Transcription factor p13.3 Seq+ 71728 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAFB2-LONP1 SAFB2 chr19 5598804 - LONP1 chr19 5708414 - Exonic hg19 LUAD TCGA-78-8660-01A 17 9 In-Frame Intra-chr p13.3 Tumor suppressor gene Transcription factor p13.3 Seq+ 71729 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAFB2-SCAF1 SAFB2 chr19 5604594 - SCAF1 chr19 50148278 + Exonic hg19 STAD TCGA-VQ-A8PQ-01A 3 9 CDS-5'UTR Intra-chr p13.3 Tumor suppressor gene Transcription factor q13.33 71730 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMD12-C4orf7 SAMD12 chr8 119592954 - C4orf7 chr4 71096912 + Exonic hg19 BRCA TCGA-A2-A0T1-01A 39 33 Out-of-frame Inter-chr q24.12 71731 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMD12-COL14A1 SAMD12 chr8 119634043 - COL14A1 chr8 121209030 + Exonic hg19 STAD TCGA-CG-4301-01A 37 15 In-Frame Intra-chr q24.12 q24.12 Seq+ 71732 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMD12-RTN1 SAMD12 chr8 119634043 - RTN1 chr14 60074210 - Exonic hg19 LUSC TCGA-22-4594-01A 126 19 In-Frame Inter-chr q24.12 q23.1 Seq+ 71733 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMD12-SAMHD1 SAMD12 chr8 119592954 - SAMHD1 chr20 35545233 - Exonic hg19 HNSC TCGA-BA-5559-01A 45 27 Out-of-frame Inter-chr q24.12 q11.23 Seq+ 71734 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMD12-SNTB1 SAMD12 chr8 119592954 - SNTB1 chr8 121644891 - Exonic hg19 OV TCGA-24-1553-01A 4 3 Out-of-frame Intra-chr q24.12 q24.12 Seq+ 71735 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMD12-SYBU SAMD12 chr8 119391799 - SYBU chr8 110631268 - Exonic hg19 BRCA TCGA-AC-A6IX-01A 4 1 In-Frame Intra-chr q24.12 q23.2 71736 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMD12-SYBU SAMD12 chr8 119391799 - SYBU chr8 110658233 - Exonic hg19 BRCA TCGA-AC-A6IX-06A 4 1 CDS-5'UTR Intra-chr q24.12 q23.2 71737 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMD12-TG SAMD12 chr8 119592954 - TG chr8 133923622 + Exonic hg19 LUSC TCGA-21-5783-01A 43 37 In-Frame Intra-chr q24.12 q24.22 Seq+ 71738 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMD12-USP37 SAMD12 chr8 119452071 - USP37 chr2 219411814 - Exonic hg19 BRCA TCGA-EW-A1PF-01A 4 8 Out-of-frame Inter-chr q24.12 q35 Seq+ 71739 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMD13-PRKACB SAMD13 chr1 84768970 - PRKACB chr1 84662299 + Exonic hg19 BLCA TCGA-DK-A6B2-01A 9 5 In-Frame Intra-chr p31.1 p31.1 Seq+ 71740 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMD14-DDX42 SAMD14 chr17 48202281 - DDX42 chr17 61892923 + Exonic hg19 BRCA TCGA-3C-AALI-01A 4 4 Out-of-frame Intra-chr q21.33 q23.3 Seq+ 71741 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMD3-GRIK2 SAMD3 chr6 130634123 - GRIK2 chr6 102483216 + Exonic hg19 UVM TCGA-VD-A8KJ-01A 7 6 5'UTR-CDS Intra-chr q23.1 q16.3 Seq+ 71742 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMD4A-CGRRF1 SAMD4A chr14 55034830 - CGRRF1 chr14 55004440 + Exonic hg19 LGG TCGA-DU-A7TJ-01A 9 9 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 71743 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMD4A-LRBA SAMD4A chr14 55034830 - LRBA chr4 151842445 - Exonic hg19 PRAD TCGA-KK-A7B4-01A 3 1 Out-of-frame Inter-chr q22.2 q31.3 71744 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMD4A-TIMM9 SAMD4A chr14 55034830 - TIMM9 chr14 58878689 - Exonic hg19 KIRP TCGA-A4-7997-01A 12 4 5'UTR-5'UTR Intra-chr q22.2 q23.1 Seq+ 71745 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMD4B-FBXO27 SAMD4B chr19 39847729 - FBXO27 chr19 39522893 - Exonic hg19 BLCA TCGA-ZF-AA58-01A 10 8 CDS-5'UTR Intra-chr q13.2 Seq+ 71746 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMD4B-GMFG SAMD4B chr19 39844706 - GMFG chr19 39823766 - Exonic hg19 UCEC TCGA-EO-A3KU-01A 8 10 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 71747 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMD4B-SIPA1L3 SAMD4B chr19 39847729 - SIPA1L3 chr19 38689029 + Exonic hg19 BRCA TCGA-EW-A3U0-01A 25 11 In-Frame Intra-chr q13.2 q13.13 Seq+ 71748 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMD4B-SLFN5 SAMD4B chr19 39847729 - SLFN5 chr17 33591202 + Exonic hg19 CESC TCGA-EA-A3HR-01A 24 7 In-Frame Inter-chr q13.2 q12 Seq+ 71749 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMD4B-SPTBN4 SAMD4B chr19 39839029 - SPTBN4 chr19 41078244 + Exonic hg19 COAD TCGA-AM-5820-01A 44 16 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 71750 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMD8-ADK SAMD8 chr10 76871480 - ADK chr10 76468079 + Exonic hg19 BLCA TCGA-4Z-AA7Q-01A 13 12 5'UTR-CDS Intra-chr q22.2 q22.2 Seq+ 71751 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMD8-KAT6B SAMD8 chr10 76928416 - KAT6B chr10 76788247 + Exonic hg19 LUAD TCGA-44-7660-01A 8 6 Out-of-frame Intra-chr q22.2 Oncogene 71752 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMD9-CCDC132 SAMD9 chr7 92744108 - CCDC132 chr7 92869179 + Exonic hg19 HNSC TCGA-P3-A6SX-01A 4 2 5'UTR-5'UTR Intra-chr q21.2 Oncogene Seq+ 71753 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMHD1-DDX27 SAMHD1 chr20 35526225 - DDX27 chr20 47852870 + Exonic hg19 BRCA TCGA-AO-A03M-01B 20 7 In-Frame Intra-chr q11.23 q13.13 Seq+ 71754 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMHD1-HCK SAMHD1 chr20 35563432 - HCK chr20 30659465 + Exonic hg19 STAD TCGA-CG-4443-01A 3 4 In-Frame Intra-chr q11.23 q11.21 TK:Src 71755 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMHD1-YIF1B SAMHD1 chr20 35547767 - YIF1B chr19 38796147 - Exonic hg19 HNSC TCGA-BA-5559-01A 44 20 In-Frame Inter-chr q11.23 q13.2 Seq+ 71756 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMM50-PIP4K2C SAMM50 chr22 44360433 - PIP4K2C chr12 57987808 + Exonic hg19 SARC TCGA-DX-AB2F-01A 6 6 In-Frame Inter-chr q13.31 q13.3 Seq+ 71757 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAMM50-TXNRD2 SAMM50 chr22 44351478 - TXNRD2 chr22 19918621 - Exonic hg19 KIRP TCGA-BQ-7056-01A 5 11 Out-of-frame Intra-chr q13.31 q11.21 Seq+ 71758 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAP30BP-ICT1 SAP30BP chr17 73689562 - ICT1 chr17 73013173 + Exonic hg19 BRCA TCGA-BH-A18V-01A 3 3 Out-of-frame Intra-chr q25.1 Seq+ 71759 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAP30BP-KIAA0195 SAP30BP chr17 73664705 - KIAA0195 chr17 73467881 + Exonic hg19 READ TCGA-AG-3731-01A 4 5 CDS-5'UTR Intra-chr q25.1 71760 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAP30BP-MYO15B SAP30BP chr17 73667943 - MYO15B chr17 73615761 + Exonic hg19 BLCA TCGA-XF-AAMZ-01A 8 5 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 71761 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAR1A-LRRC20 SAR1A chr10 71930169 - LRRC20 chr10 72083786 - Exonic hg19 PAAD TCGA-F2-6879-01A 6 3 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 71762 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAR1A-NPFFR1 SAR1A chr10 71930169 - NPFFR1 chr10 72026147 - Exonic hg19 LUAD TCGA-38-4630-01A 18 13 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 71763 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SARNP-MMP19 SARNP chr12 56211450 - MMP19 chr12 56236222 - Exonic hg19 SARC TCGA-HB-A43Z-01A 5 13 In-Frame Intra-chr q13.2 q13.2 Seq+ 71764 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SARNP-MMP19 SARNP chr12 56211450 - MMP19 chr12 56236222 - Exonic hg19 UCS TCGA-NA-A4QV-01A 2 7 In-Frame Intra-chr q13.2 q13.2 Seq+ 71765 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SARNP-PAN2 SARNP chr12 56211450 - PAN2 chr12 56722425 - Exonic hg19 BLCA TCGA-2F-A9KP-01A 4 47 In-Frame Intra-chr q13.2 q13.3 Seq+ 71766 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SARS-KIAA1324 SARS chr1 109766670 - KIAA1324 chr1 109704516 + Exonic hg19 BRCA TCGA-BH-A18V-01A 104 66 In-Frame Intra-chr p13.3 p13.3 Seq+ 71767 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SARS-KIAA1324 SARS chr1 109766670 - KIAA1324 chr1 109704516 + Exonic hg19 BRCA TCGA-BH-A18V-06A 62 58 In-Frame Intra-chr p13.3 p13.3 Seq+ 71768 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SART1-CNTN5 SART1 chr11 65735292 - CNTN5 chr11 99690275 + Exonic hg19 HNSC TCGA-CV-7100-01A 17 11 Out-of-frame Intra-chr q13.1 q22.1 Seq+ 71769 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SART3-CORO1C SART3 chr12 108954619 - CORO1C chr12 109041298 - Exonic hg19 LUAD TCGA-MP-A4SW-01A 13 10 In-Frame Intra-chr q23.3 q24.11 Seq+ 71770 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SART3-DAO SART3 chr12 108938915 - DAO chr12 109278774 + Exonic hg19 UCEC TCGA-BG-A3PP-01A 20 22 CDS-5'UTR Intra-chr q23.3 q24.11 Seq+ 71771 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SART3-PAH SART3 chr12 108941663 - PAH chr12 103288696 - Exonic hg19 SARC TCGA-DX-A3U5-01A 45 4 Out-of-frame Intra-chr q23.3 q23.2 Seq+ 71772 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SASH1-ARID1B SASH1 chr6 148711398 - ARID1B chr6 157256600 + Exonic hg19 BRCA TCGA-E9-A1NF-01A 17 14 In-Frame Intra-chr q24.3 Tumor suppressor gene q25.3 Oncogene Seq+ 71773 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SASH1-C6orf103 SASH1 chr6 148664359 - C6orf103 chr6 146965909 + Exonic hg19 PRAD TCGA-YJ-A8SW-01A 4 6 Out-of-frame Intra-chr q24.3 Tumor suppressor gene 71774 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SASH1-MLLT4 SASH1 chr6 148841029 - MLLT4 chr6 168343809 + Exonic hg19 LGG TCGA-HT-A5RC-01A 20 8 In-Frame Intra-chr q24.3 Tumor suppressor gene Seq+ 71775 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SASH1-PLN SASH1 chr6 148664359 - PLN chr6 118879988 + Exonic hg19 UCEC TCGA-AJ-A3IA-01A 6 3 CDS-5'UTR Intra-chr q24.3 Tumor suppressor gene q22.31 Seq+ 71776 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SASH1-STAB2 SASH1 chr6 148867282 - STAB2 chr12 104152911 + Exonic hg19 SARC TCGA-DX-A1L4-01A 12 17 In-Frame Inter-chr q24.3 Tumor suppressor gene q23.3 Seq+ 71777 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAT1-CTTN SAT1 chrX 23804230 - CTTN chr11 70281572 + Exonic hg19 PRAD TCGA-EJ-7784-01A 2 1 5'UTR-CDS Inter-chr p22.11 q13.3 71778 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SATB1-GOLGA5 SATB1 chr3 18435954 - GOLGA5 chr14 93263753 + Exonic hg19 LIHC TCGA-DD-A4NG-01A 4 6 CDS-5'UTR Inter-chr p24.3 Transcription factor q32.12 Seq+ 71779 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SATB1-STAC SATB1 chr3 18419662 - STAC chr3 36484856 + Exonic hg19 PRAD TCGA-EJ-7785-01A 4 2 In-Frame Intra-chr p24.3 Transcription factor p22.3 Seq+ 71780 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SAV1-ATL1 SAV1 chr14 51101932 - ATL1 chr14 51094749 + Exonic hg19 BRCA TCGA-D8-A27M-01A 2 1 Out-of-frame Intra-chr q22.1 q22.1 71781 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBF1-C22orf41 SBF1 chr22 50892941 - C22orf41 chr22 50994834 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 34 32 Out-of-frame Intra-chr q13.33 71782 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBF1-ODZ4 SBF1 chr22 50905767 - ODZ4 chr11 78468066 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 29 20 Out-of-frame Inter-chr q13.33 Seq+ 71783 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBF2-C11orf49 SBF2 chr11 10215449 - C11orf49 chr11 47073939 + Exonic hg19 LIHC TCGA-DD-AADP-01A 45 19 Out-of-frame Intra-chr p15.4 p11.2 Seq+ 71784 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBF2-CNTN5 SBF2 chr11 10215449 - CNTN5 chr11 100061858 + Exonic hg19 SKCM TCGA-EE-A2GR-06A 11 13 Out-of-frame Intra-chr p15.4 q22.1 Seq+ 71785 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBF2-FEZ1 SBF2 chr11 10215449 - FEZ1 chr11 125333466 - Exonic hg19 BRCA TCGA-E2-A14Q-01A 3 2 In-Frame Intra-chr p15.4 q24.2 Tumor suppressor gene 71786 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBF2-MDM2 SBF2 chr11 9983504 - MDM2 chr12 69210592 + Exonic hg19 BRCA TCGA-A8-A06U-01A 4 2 In-Frame Inter-chr p15.4 q15 Oncogene 71787 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBF2-MRGPRX3 SBF2 chr11 10315562 - MRGPRX3 chr11 18154161 + Exonic hg19 SKCM TCGA-GN-A268-06A 4 3 CDS-5'UTR Intra-chr p15.4 p15.1 Seq+ 71788 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBF2-MRVI1 SBF2 chr11 10215449 - MRVI1 chr11 10655618 - Exonic hg19 LUSC TCGA-66-2744-01A 20 1 In-Frame Intra-chr p15.4 p15.4 Tumor suppressor gene 71789 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBF2-PAGE4 SBF2 chr11 9917490 - PAGE4 chrX 49595002 + Exonic hg19 HNSC TCGA-P3-A6T8-01A 3 1 CDS-5'UTR Inter-chr p15.4 p11.23 71790 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBF2-PDE3B SBF2 chr11 10049999 - PDE3B chr11 14793483 + Exonic hg19 LUAD TCGA-55-A491-01A 7 1 Out-of-frame Intra-chr p15.4 p15.2 Seq+ 71791 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBF2-PGAP2 SBF2 chr11 10011044 - PGAP2 chr11 3829524 + Exonic hg19 BRCA TCGA-A8-A08G-01A 5 3 Out-of-frame Intra-chr p15.4 p15.4 Seq+ 71792 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBF2-PRMT3 SBF2 chr11 10315562 - PRMT3 chr11 20473676 + Exonic hg19 LUSC TCGA-37-4132-01A 12 22 Out-of-frame Intra-chr p15.4 p15.1 Transcription factor Seq+ 71793 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBF2-TMEM99 SBF2 chr11 10215449 - TMEM99 chr17 38989367 + Exonic hg19 BRCA TCGA-A8-A08L-01A 2 1 CDS-5'UTR Inter-chr p15.4 q21.2 Seq+ 71794 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBNO2-ADARB1 SBNO2 chr19 1149368 - ADARB1 chr21 46645462 + Exonic hg19 BRCA TCGA-AC-A2BK-01A 2 3 Out-of-frame Inter-chr p13.3 q22.3 Tumor suppressor gene Seq+ 71795 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBNO2-C19orf20 SBNO2 chr19 1149368 - C19orf20 chr19 518889 + Exonic hg19 BRCA TCGA-A2-A1FX-01A 4 2 Out-of-frame Intra-chr p13.3 71796 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBNO2-C19orf20 SBNO2 chr19 1149368 - C19orf20 chr19 518889 + Exonic hg19 BRCA TCGA-AC-A2BK-01A 13 7 Out-of-frame Intra-chr p13.3 71797 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBNO2-C19orf20 SBNO2 chr19 1149368 - C19orf20 chr19 518889 + Exonic hg19 CESC TCGA-LP-A7HU-01A 2 1 Out-of-frame Intra-chr p13.3 71798 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBNO2-C19orf26 SBNO2 chr19 1174171 - C19orf26 chr19 1236120 - Exonic hg19 STAD TCGA-BR-A4QI-01A 2 12 5'UTR-5'UTR Intra-chr p13.3 Seq+ 71799 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBNO2-C19orf26 SBNO2 chr19 1147308 - C19orf26 chr19 1233635 - Exonic hg19 BRCA TCGA-GM-A2DD-01A 6 6 In-Frame Intra-chr p13.3 Seq+ 71800 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBNO2-C19orf26 SBNO2 chr19 1174171 - C19orf26 chr19 1234741 - Exonic hg19 UCS TCGA-N9-A4PZ-01A 17 6 5'UTR-CDS Intra-chr p13.3 Seq+ 71801 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBNO2-CACNA2D2 SBNO2 chr19 1132089 - CACNA2D2 chr3 50471860 - Exonic hg19 UCEC TCGA-AX-A2H4-01A 12 1 In-Frame Inter-chr p13.3 p21.31 Seq+ 71802 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBNO2-CEBPG SBNO2 chr19 1147308 - CEBPG chr19 33870050 + Exonic hg19 LGG TCGA-WY-A85E-01A 2 2 CDS-5'UTR Intra-chr p13.3 q13.11 Transcription factor 71803 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBNO2-CLEC4M SBNO2 chr19 1147308 - CLEC4M chr19 7830524 + Exonic hg19 LGG TCGA-TM-A7CF-01A 3 4 Out-of-frame Intra-chr p13.3 p13.2 Seq+ 71804 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBNO2-CLEC4M SBNO2 chr19 1147308 - CLEC4M chr19 7830524 + Exonic hg19 LGG TCGA-TM-A7CF-02A 5 2 Out-of-frame Intra-chr p13.3 p13.2 Seq+ 71805 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBNO2-HMHA1 SBNO2 chr19 1116020 - HMHA1 chr19 1080463 + Exonic hg19 HNSC TCGA-UF-A7JC-01A 71 38 In-Frame Intra-chr p13.3 Seq+ 71806 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBNO2-NANOS3 SBNO2 chr19 1147308 - NANOS3 chr19 13991256 + Exonic hg19 THYM TCGA-XU-A92V-01A 42 18 Out-of-frame Intra-chr p13.3 p13.12 Seq+ 71807 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBNO2-PIAS4 SBNO2 chr19 1174171 - PIAS4 chr19 4012921 + Exonic hg19 OV TCGA-24-1431-01A 6 3 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 71808 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBNO2-RAP1GAP SBNO2 chr19 1154183 - RAP1GAP chr1 21976289 - Exonic hg19 SKCM TCGA-EB-A5SH-06A 178 84 Out-of-frame Inter-chr p13.3 p36.12 Tumor suppressor gene Seq+ 71809 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBNO2-SERINC2 SBNO2 chr19 1149368 - SERINC2 chr1 31905814 + Exonic hg19 BRCA TCGA-EW-A6SA-01A 20 17 In-Frame Inter-chr p13.3 p35.2 Seq+ 71810 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SBNO2-TULP2 SBNO2 chr19 1174171 - TULP2 chr19 49392888 - Exonic hg19 ACC TCGA-OR-A5J7-01A 4 4 5'UTR-CDS Intra-chr p13.3 q13.33 Seq+ 71811 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SC5DL-ARHGEF12 SC5DL chr11 121163525 - ARHGEF12 chr11 120276827 + Exonic hg19 LUAD TCGA-50-6592-01A 2 2 5'UTR-CDS Intra-chr q23.3 Tumor suppressor gene 71812 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SC5DL-SPA17 SC5DL chr11 121163525 - SPA17 chr11 124545134 + Exonic hg19 SARC TCGA-DX-A23Z-01A 81 349 5'UTR-5'UTR Intra-chr q24.2 Seq+ 71813 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAF1-FLT3LG SCAF1 chr19 50156962 - FLT3LG chr19 49982166 + Exonic hg19 HNSC TCGA-CN-4731-01A 45 13 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 71814 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAF1-MAP4K1 SCAF1 chr19 50161146 - MAP4K1 chr19 39078457 - Exonic hg19 BRCA TCGA-A2-A0EV-01A 34 13 Out-of-frame Intra-chr q13.33 Tumor suppressor gene Seq+ 71815 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAF1-TRAPPC6A SCAF1 chr19 50150087 - TRAPPC6A chr19 45668452 - Exonic hg19 GBM TCGA-19-2620-01A 17 25 Out-of-frame Intra-chr q13.33 q13.32 Seq+ 71816 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAF11-ADCY8 SCAF11 chr12 46342220 - ADCY8 chr8 131826473 - Exonic hg19 LUSC TCGA-56-6545-01A 5 4 CDS-5'UTR Inter-chr q12 q24.22 71817 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAF4-HLCS SCAF4 chr21 33103976 - HLCS chr21 38139586 - Exonic hg19 PRAD TCGA-HC-7078-01A 4 1 Out-of-frame Intra-chr q22.11 q22.13 71818 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAF8-C6orf72 SCAF8 chr6 155055064 - C6orf72 chr6 149893421 + Exonic hg19 BRCA TCGA-A2-A0T4-01A 2 6 In-Frame Intra-chr q25.2 71819 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAF8-GREB1 SCAF8 chr6 155148374 - GREB1 chr2 11770074 + Exonic hg19 PRAD TCGA-V1-A9O9-01A 7 11 Out-of-frame Inter-chr q25.2 p25.1 Seq+ 71820 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAF8-IL20RA SCAF8 chr6 155114110 - IL20RA chr6 137338240 - Exonic hg19 SARC TCGA-HB-A3YV-01A 55 33 In-Frame Intra-chr q25.2 q23.3 Seq+ 71821 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAF8-KIAA0564 SCAF8 chr6 155095206 - KIAA0564 chr13 42361679 - Exonic hg19 THCA TCGA-CE-A13K-01A 12 12 Out-of-frame Inter-chr q25.2 71822 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAF8-SAMD5 SCAF8 chr6 155055064 - SAMD5 chr6 147885530 + Exonic hg19 PRAD TCGA-M7-A71Z-01A 4 2 In-Frame Intra-chr q25.2 q24.3 Seq+ 71823 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAI-CA8 SCAI chr9 127762170 - CA8 chr8 61102544 - Exonic hg19 BRCA TCGA-A8-A08X-01A 3 2 CDS-3'UTR Inter-chr q33.3 q12.1 71824 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAI-PPP6C SCAI chr9 127904912 - PPP6C chr9 127912200 - Exonic hg19 BRCA TCGA-B6-A0RT-01A 18 12 Out-of-frame Intra-chr q33.3 q33.3 Seq+ 71825 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAI-TOX3 SCAI chr9 127904912 - TOX3 chr16 52484458 - Exonic hg19 BRCA TCGA-E9-A3HO-01A 5 5 Out-of-frame Inter-chr q33.3 q12.1 Seq+ 71826 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAMP2-PLAUR SCAMP2 chr15 75165540 - PLAUR chr19 44160792 - Exonic hg19 SKCM TCGA-ER-A3ET-06A 23 5 Out-of-frame Inter-chr q24.1 q13.31 Seq+ 71827 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAMP2-SLC12A8 SCAMP2 chr15 75165540 - SLC12A8 chr3 124811042 - Exonic hg19 BRCA TCGA-D8-A27H-01A 71 28 Out-of-frame Inter-chr q24.1 q21.2 Seq+ 71828 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAMP2-SLCO3A1 SCAMP2 chr15 75165540 - SLCO3A1 chr15 92638111 + Exonic hg19 SARC TCGA-X6-A8C2-01A 7 3 Out-of-frame Intra-chr q24.1 q26.1 Seq+ 71829 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAMP4-COX8A SCAMP4 chr19 1918989 - COX8A chr11 63743697 + Exonic hg19 ACC TCGA-OR-A5JP-01A 210 100 Out-of-frame Inter-chr p13.3 q13.1 Seq+ 71830 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAMP4-DAZAP1 SCAMP4 chr19 1905438 - DAZAP1 chr19 1417499 + Exonic hg19 BLCA TCGA-E7-A85H-01A 2 25 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 71831 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAP-C3orf75 SCAP chr3 47476498 - C3orf75 chr3 47545938 - Exonic hg19 BRCA TCGA-A2-A4S1-01A 7 3 In-Frame Intra-chr p21.31 71832 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAP-SLC25A20 SCAP chr3 47517289 - SLC25A20 chr3 48929505 - Exonic hg19 OV TCGA-24-1467-01A 4 3 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 71833 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAP-SMARCC1 SCAP chr3 47517289 - SMARCC1 chr3 47712207 - Exonic hg19 HNSC TCGA-CV-6962-01A 7 55 5'UTR-CDS Intra-chr p21.31 p21.31 Tumor suppressor gene Seq+ 71834 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAPER-AC087465.1 SCAPER chr15 76957994 - AC087465.1 chr15 77426092 - Exonic hg19 BRCA TCGA-AR-A0TS-01A 3 1 Out-of-frame Intra-chr q24.3 q24.3 71835 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAPER-C15orf27 SCAPER chr15 76696865 - C15orf27 chr15 76426509 + Exonic hg19 HNSC TCGA-D6-A4ZB-01A 3 3 CDS-5'UTR Intra-chr q24.3 Seq+ 71836 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAPER-CEP120 SCAPER chr15 77176153 - CEP120 chr5 122685783 - Exonic hg19 COAD TCGA-AA-A02K-01A 4 1 In-Frame Inter-chr q24.3 q23.2 Seq+ 71837 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAPER-GLCE SCAPER chr15 77092589 - GLCE chr15 69548133 + Exonic hg19 SARC TCGA-FX-A3TO-01A 3 2 5'UTR-5'UTR Intra-chr q24.3 q23 Seq+ 71838 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAPER-LINGO1 SCAPER chr15 77176153 - LINGO1 chr15 77908242 - Exonic hg19 OV TCGA-13-0893-01B 3 3 In-Frame Intra-chr q24.3 q24.3 Seq+ 71839 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCAPER-TSPAN3 SCAPER chr15 77134075 - TSPAN3 chr15 77348597 - Exonic hg19 SKCM TCGA-EE-A29D-06A 67 53 In-Frame Intra-chr q24.3 q24.3 Seq+ 71840 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCARA3-TPM2 SCARA3 chr8 27530537 - TPM2 chr9 35689919 - Exonic hg19 SARC TCGA-DX-A3U9-01A 2 1 Out-of-frame Inter-chr p21.1 p13.3 71841 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCARB1-DHX37 SCARB1 chr12 125348141 - DHX37 chr12 125462036 - Exonic hg19 BRCA TCGA-B6-A0I1-01A 24 11 In-Frame Intra-chr q24.31 q24.31 Seq+ 71842 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCARB1-EEA1 SCARB1 chr12 125262186 - EEA1 chr12 93229203 - Exonic hg19 ACC TCGA-OR-A5JP-01A 2 42 Out-of-frame Intra-chr q24.31 q22 Transcription factor 71843 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCARB1-EIF3D SCARB1 chr12 125262179 - EIF3D chr22 36922952 - Exonic hg19 ACC TCGA-OR-A5JY-01A 3 1 Out-of-frame Inter-chr q24.31 q12.3 71844 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCARB1-RIMBP2 SCARB1 chr12 125270903 - RIMBP2 chr12 131002462 - Exonic hg19 LGG TCGA-WY-A85A-01A 4 1 CDS-5'UTR Intra-chr q24.31 q24.33 Seq+ 71845 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCARB1-SUB1 SCARB1 chr12 125348141 - SUB1 chr5 32599067 + Exonic hg19 PRAD TCGA-KK-A7AU-01A 7 11 In-Frame Inter-chr q24.31 p13.3 Seq+ 71846 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCARB2-NIPSNAP1 SCARB2 chr4 77134580 - NIPSNAP1 chr22 29957851 - Exonic hg19 LIHC TCGA-ED-A7XO-01A 26 46 Out-of-frame Inter-chr q21.1 q12.2 Seq+ 71847 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCARB2-SGMS1 SCARB2 chr4 77134580 - SGMS1 chr10 52104105 - Exonic hg19 ACC TCGA-OR-A5JM-01A 8 6 CDS-5'UTR Inter-chr q21.1 q11.23 Tumor suppressor gene Seq+ 71848 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCARB2-STAU2 SCARB2 chr4 77116860 - STAU2 chr8 74495065 - Exonic hg19 BRCA TCGA-A2-A0D0-01A 10 19 Out-of-frame Inter-chr q21.1 q21.11 Seq+ 71849 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCCPDH-CNST SCCPDH chr1 246890306 - CNST chr1 246823501 + Exonic hg19 BRCA TCGA-B6-A0RT-01A 10 6 In-Frame Intra-chr q44 q44 Seq+ 71850 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCD-GPR19 SCD chr10 102108103 - GPR19 chr12 12815404 - Exonic hg19 BRCA TCGA-A8-A07I-01A 52 35 CDS-5'UTR Inter-chr q24.31 p13.1 Seq+ 71851 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCD-SEC61A2 SCD chr10 102116521 - SEC61A2 chr10 12191594 + Exonic hg19 LGG TCGA-TM-A84J-01A 278 610 In-Frame Intra-chr q24.31 p14 Seq+ 71852 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCD5-SEC31A SCD5 chr4 83719459 - SEC31A chr4 83765662 - Exonic hg19 ACC TCGA-OR-A5J7-01A 14 6 Out-of-frame Intra-chr q21.22 q21.22 Seq+ 71853 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCD5-STAP1 SCD5 chr4 83557744 - STAP1 chr4 68472014 + Exonic hg19 PRAD TCGA-HC-7212-01A 5 2 In-Frame Intra-chr q21.22 q13.2 Seq+ 71854 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCFD2-FIP1L1 SCFD2 chr4 54218765 - FIP1L1 chr4 54292039 + Exonic hg19 LGG TCGA-S9-A6WQ-01A 8 8 In-Frame Intra-chr q12 q12 Seq+ 71855 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCFD2-GSX2 SCFD2 chr4 54218765 - GSX2 chr4 54967749 + Exonic hg19 GBM TCGA-76-4928-01B 4 6 Out-of-frame Intra-chr q12 q12 Transcription factor Seq+ 71856 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCFD2-LNX1 SCFD2 chr4 54139993 - LNX1 chr4 54457682 - Exonic hg19 LGG TCGA-E1-A7YI-01A 53 46 CDS-5'UTR Intra-chr q12 q12 Seq+ 71857 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCFD2-NARS2 SCFD2 chr4 54218765 - NARS2 chr11 78180359 - Exonic hg19 LUAD TCGA-86-8074-01A 31 21 In-Frame Inter-chr q12 q14.1 Seq+ 71858 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCFD2-SPINK2 SCFD2 chr4 54011500 - SPINK2 chr4 57686745 - Exonic hg19 LGG TCGA-HT-7477-01B 8 4 In-Frame Intra-chr q12 q12 Seq+ 71859 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCG2-PTGS1 SCG2 chr2 224463684 - PTGS1 chr9 125140178 + Exonic hg19 PCPG TCGA-QR-A6GR-01A 2 1 Out-of-frame Inter-chr q36.1 Tumor suppressor gene q33.2 71860 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCGB1D2-FADS2 SCGB1D2 chr11 62012280 - FADS2 chr11 61588853 + Exonic hg19 BRCA TCGA-E9-A3Q9-01A 2 1 Out-of-frame Intra-chr q12.3 q12.2 71861 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCGB1D2-IQGAP1 SCGB1D2 chr11 62012280 - IQGAP1 chr15 91037945 + Exonic hg19 BRCA TCGA-E9-A3Q9-01A 4 1 3'UTR-CDS Inter-chr q12.3 q26.1 71862 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCGB3A1-CAST SCGB3A1 chr5 180017103 - CAST chr5 95997778 + Exonic hg19 LUAD TCGA-78-7163-01A 3 1 Out-of-frame Intra-chr q35.3 Tumor suppressor gene q15 71863 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCLY-RAMP1 SCLY chr2 238978118 - RAMP1 chr2 238820170 + Exonic hg19 STAD TCGA-BR-4357-01A 6 5 Out-of-frame Intra-chr q37.3 q37.3 71864 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCLY-UBE2F SCLY chr2 238976806 - UBE2F chr2 238933983 + Exonic hg19 CESC TCGA-VS-A8EC-01A 6 1 In-Frame Intra-chr q37.3 q37.3 71865 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCMH1-CA6 SCMH1 chr1 41499655 - CA6 chr1 9009322 + Exonic hg19 ACC TCGA-OR-A5J7-01A 51 26 In-Frame Intra-chr p34.2 Transcription factor p36.23 Seq+ 71866 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCMH1-CASP9 SCMH1 chr1 41707731 - CASP9 chr1 15844890 - Exonic hg19 SARC TCGA-K1-A3PO-01A 7 14 5'UTR-5'UTR Intra-chr p34.2 Transcription factor p36.21 Seq+ 71867 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCMH1-CUL3 SCMH1 chr1 41707731 - CUL3 chr2 225346795 - Exonic hg19 LUAD TCGA-44-7670-01A 28 44 5'UTR-CDS Inter-chr p34.2 Transcription factor q36.2 Seq+ 71868 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCMH1-EIF2B3 SCMH1 chr1 41578955 - EIF2B3 chr1 45316675 - Exonic hg19 BRCA TCGA-JL-A3YW-01A 11 18 In-Frame Intra-chr p34.2 Transcription factor p34.1 Seq+ 71869 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCMH1-EIF2C3 SCMH1 chr1 41626547 - EIF2C3 chr1 36492715 + Exonic hg19 BRCA TCGA-A7-A26J-01A 4 3 Out-of-frame Intra-chr p34.2 Transcription factor 71870 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCMH1-GPBP1L1 SCMH1 chr1 41707731 - GPBP1L1 chr1 46099908 - Exonic hg19 BRCA TCGA-OL-A5RZ-01A 27 39 5'UTR-CDS Intra-chr p34.2 Transcription factor p34.1 Transcription factor Seq+ 71871 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCMH1-HOOK3 SCMH1 chr1 41578955 - HOOK3 chr8 42761316 + Exonic hg19 SARC TCGA-HB-A5W3-01A 11 2 Out-of-frame Inter-chr p34.2 Transcription factor p11.21 Oncogene Seq+ 71872 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCMH1-MACF1 SCMH1 chr1 41608550 - MACF1 chr1 39945470 + Exonic hg19 PRAD TCGA-CH-5788-01A 5 1 In-Frame Intra-chr p34.2 Transcription factor p34.3 71873 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCMH1-PPT1 SCMH1 chr1 41536267 - PPT1 chr1 40539855 - Exonic hg19 BRCA TCGA-E9-A1R7-01A 13 50 Out-of-frame Intra-chr p34.2 Transcription factor p34.2 Seq+ 71874 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCMH1-SDCBP2 SCMH1 chr1 41707731 - SDCBP2 chr20 1301079 - Exonic hg19 CESC TCGA-EK-A2RM-01A 13 17 5'UTR-5'UTR Inter-chr p34.2 Transcription factor p13 Seq+ 71875 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCMH1-SHISA5 SCMH1 chr1 41651793 - SHISA5 chr3 48538726 - Exonic hg19 HNSC TCGA-CR-7397-01A 25 8 In-Frame Inter-chr p34.2 Transcription factor p21.31 Seq+ 71876 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCMH1-SQRDL SCMH1 chr1 41536267 - SQRDL chr15 45951105 + Exonic hg19 PRAD TCGA-V1-A9O9-01A 13 9 CDS-5'UTR Inter-chr p34.2 Transcription factor Seq+ 71877 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCML2-MAP7D2 SCML2 chrX 18323092 - MAP7D2 chrX 20082923 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 23 20 In-Frame Intra-chr p22.13 p22.12 Seq+ 71878 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCML4-TUSC3 SCML4 chr6 108093376 - TUSC3 chr8 15480589 + Exonic hg19 BRCA TCGA-BH-A1FE-01A 3 2 In-Frame Inter-chr q21 Transcription factor p22 Seq+ 71879 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCN4A-TRIM47 SCN4A chr17 62034522 - TRIM47 chr17 73872573 - Exonic hg19 LUAD TCGA-78-7146-01A 7 4 In-Frame Intra-chr q23.3 q25.1 Seq+ 71880 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCN8A-ANO2 SCN8A chr12 52056877 - ANO2 chr12 5756967 - Exonic hg19 SARC TCGA-3B-A9HL-01A 46 42 In-Frame Intra-chr q13.13 p13.31 Seq+ 71881 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCN8A-ATF1 SCN8A chr12 52184286 - ATF1 chr12 51189692 + Exonic hg19 LGG TCGA-DH-A66G-01A 4 6 In-Frame Intra-chr q13.13 q13.12 Oncogene Transcription factor Seq+ 71882 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCN8A-KCNC2 SCN8A chr12 52093575 - KCNC2 chr12 75445097 - Exonic hg19 BLCA TCGA-4Z-AA7W-01A 5 2 Out-of-frame Intra-chr q13.13 q21.1 Seq+ 71883 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCN8A-PPFIA2 SCN8A chr12 52145377 - PPFIA2 chr12 81851645 - Exonic hg19 SARC TCGA-DX-AB2G-01A 4 2 In-Frame Intra-chr q13.13 q21.31 Seq+ 71884 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCNN1A-DCP1B SCNN1A chr12 6457893 - DCP1B chr12 2055452 - Exonic hg19 HNSC TCGA-BA-6871-01A 60 9 In-Frame Intra-chr p13.31 p13.33 Seq+ 71885 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCNN1G-COL27A1 SCNN1G chr16 23224484 - COL27A1 chr9 116924995 + Exonic hg19 BRCA TCGA-A2-A04T-01A 15 5 5'UTR-CDS Inter-chr p12.2 q32 Seq+ 71886 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCO1-ARX SCO1 chr17 10590044 - ARX chrX 25023027 - Exonic hg19 LGG TCGA-DU-6404-02A 27 20 Out-of-frame Inter-chr p13.1 p21.3 Transcription factor Seq+ 71887 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCP2-ECHDC2 SCP2 chr1 53393137 - ECHDC2 chr1 53364896 - Exonic hg19 BRCA TCGA-E2-A1IH-01A 5 4 In-Frame Intra-chr p32.3 p32.3 71888 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCP2-NCAM1 SCP2 chr1 53393137 - NCAM1 chr11 113126599 + Exonic hg19 PRAD TCGA-V1-A9ZG-01A 5 2 Out-of-frame Inter-chr p32.3 q23.2 Seq+ 71889 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCP2-STXBP3 SCP2 chr1 53480715 - STXBP3 chr1 109336204 + Exonic hg19 SKCM TCGA-EE-A2M8-06A 13 9 Out-of-frame Intra-chr p32.3 p13.3 Seq+ 71890 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCRIB-NRBP2 SCRIB chr8 144897384 - NRBP2 chr8 144922401 - Exonic hg19 LGG TCGA-HT-A5RC-01A 32 12 In-Frame Intra-chr Tumor suppressor gene q24.3 Other:NRBP Seq+ 71891 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCRN1-WDR53 SCRN1 chr7 30029258 - WDR53 chr3 196281678 - Exonic hg19 LUSC TCGA-66-2769-01A 9 6 5'UTR-CDS Inter-chr p14.3 q29 Seq+ 71892 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCRN1-WIPF3 SCRN1 chr7 30029258 - WIPF3 chr7 29954109 + Exonic hg19 LUSC TCGA-22-A5C4-01A 8 5 5'UTR-CDS Intra-chr p14.3 p14.3 Seq+ 71893 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCRN2-CBX1 SCRN2 chr17 45918036 - CBX1 chr17 46152462 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 21 16 In-Frame Intra-chr q21.32 q21.32 Seq+ 71894 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCRN2-GIP SCRN2 chr17 45915636 - GIP chr17 47041842 - Exonic hg19 UCS TCGA-N8-A56S-01A 15 6 Out-of-frame Intra-chr q21.32 q21.32 Seq+ 71895 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCRN2-SKAP1 SCRN2 chr17 45915636 - SKAP1 chr17 46211178 - Exonic hg19 BRCA TCGA-B6-A0I1-01A 2 4 CDS-3'UTR Intra-chr q21.32 q21.32 Seq+ 71896 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCUBE2-LDHC SCUBE2 chr11 9090917 - LDHC chr11 18451284 + Exonic hg19 BLCA TCGA-FD-A5BV-01A 24 13 In-Frame Intra-chr p15.4 Tumor suppressor gene p15.1 Seq+ 71897 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCUBE3-ANKS1A SCUBE3 chr6 35196516 - ANKS1A chr6 35050468 + Exonic hg19 BRCA TCGA-A8-A07U-01A 6 3 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 71898 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCUBE3-ANKS1A SCUBE3 chr6 35196516 - ANKS1A chr6 35085023 + Exonic hg19 BRCA TCGA-AR-A1AH-01A 3 1 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 71899 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCYL1-FRMD8 SCYL1 chr11 65294588 - FRMD8 chr11 65172335 + Exonic hg19 BRCA TCGA-BH-A0B7-01A 19 8 In-Frame Intra-chr q13.1 Other:SCY1 Tumor suppressor gene q13.1 Seq+ 71900 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCYL1-TRPM8 SCYL1 chr11 65306175 - TRPM8 chr2 234826043 + Exonic hg19 PRAD TCGA-EJ-7327-01A 2 1 3'UTR-5'UTR Inter-chr q13.1 Other:SCY1 Tumor suppressor gene q37.1 71901 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCYL2-ANKS1B SCYL2 chr12 100661174 - ANKS1B chr12 100219167 - Exonic hg19 SKCM TCGA-ER-A19T-01A 8 7 5'UTR-CDS Intra-chr q23.1 Other:SCY1 q23.1 Seq+ 71902 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCYL2-DEPDC4 SCYL2 chr12 100691953 - DEPDC4 chr12 100650004 - Exonic hg19 LUSC TCGA-85-7710-01A 3 1 Out-of-frame Intra-chr q23.1 Other:SCY1 q23.1 71903 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCYL2-FAM71C SCYL2 chr12 100676925 - FAM71C chr12 100043066 + Exonic hg19 BRCA TCGA-A8-A07O-01A 11 10 In-Frame Intra-chr q23.1 Other:SCY1 q23.1 Seq+ 71904 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCYL2-UTP20 SCYL2 chr12 100691953 - UTP20 chr12 101750704 + Exonic hg19 BLCA TCGA-CF-A7I0-01A 2 2 Out-of-frame Intra-chr q23.1 Other:SCY1 q23.2 Seq+ 71905 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCYL3-CLPTM1L SCYL3 chr1 169857817 - CLPTM1L chr5 1325931 - Exonic hg19 SKCM TCGA-EE-A20F-06A 7 6 In-Frame Inter-chr q24.2 Other:SCY1 p15.33 Seq+ 71906 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCYL3-KIFAP3 SCYL3 chr1 169842837 - KIFAP3 chr1 169923251 - Exonic hg19 LUSC TCGA-77-A5GH-01A 4 3 Out-of-frame Intra-chr q24.2 Other:SCY1 q24.2 Seq+ 71907 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCYL3-KIFAP3 SCYL3 chr1 169857817 - KIFAP3 chr1 169985765 - Exonic hg19 STAD TCGA-BR-8297-01A 5 22 In-Frame Intra-chr q24.2 Other:SCY1 q24.2 Seq+ 71908 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCYL3-PDZRN4 SCYL3 chr1 169831754 - PDZRN4 chr12 41900258 + Exonic hg19 PRAD TCGA-EJ-5519-01A 14 3 In-Frame Inter-chr q24.2 Other:SCY1 q12 Seq+ 71909 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SCYL3-TSPAN8 SCYL3 chr1 169857817 - TSPAN8 chr12 71551567 - Exonic hg19 SARC TCGA-DX-AB2H-01A 12 5 CDS-5'UTR Inter-chr q24.2 Other:SCY1 q21.1 Seq+ 71910 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDAD1-C4orf22 SDAD1 chr4 76902525 - C4orf22 chr4 81791147 + Exonic hg19 LGG TCGA-DU-A7TA-01A 2 2 In-Frame Intra-chr q21.1 q21.21 71911 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDAD1-CXCL9 SDAD1 chr4 76902525 - CXCL9 chr4 76927427 - Exonic hg19 CESC TCGA-FU-A23L-01A 6 2 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 71912 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDAD1-PARM1 SDAD1 chr4 76911905 - PARM1 chr4 75937635 + Exonic hg19 CESC TCGA-C5-A8XH-01A 3 2 Out-of-frame Intra-chr q21.1 q13.3 71913 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDC1-PLAT SDC1 chr2 20400560 - PLAT chr8 42051245 - Exonic hg19 CESC TCGA-IR-A3LC-01A 2 23 Out-of-frame Inter-chr p24.1 p11.21 71914 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDC1-PUM2 SDC1 chr2 20402848 - PUM2 chr2 20463221 - Exonic hg19 STAD TCGA-HF-A5NB-01A 3 46 In-Frame Intra-chr p24.1 p24.1 Seq+ 71915 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDC2-CTD-3025N20.2 SDC2 chr8 97506559 - CTD-3025N20.2 chr8 66447099 - Exonic hg19 LUAD TCGA-55-7725-01A 7 23 Out-of-frame Intra-chr q22.1 71916 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDC2-LIN7A SDC2 chr8 97506271 - LIN7A chr12 81283148 - Exonic hg19 SARC TCGA-3B-A9HO-01A 9 3 5'UTR-CDS Inter-chr q22.1 q21.31 71917 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDC3-CHD1 SDC3 chr1 31342314 - CHD1 chr5 98219587 - Exonic hg19 SKCM TCGA-EE-A2GP-06A 2 25 Out-of-frame Inter-chr p35.2 q21.1 Tumor suppressor gene 71918 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDC3-SLC1A3 SDC3 chr1 31342314 - SLC1A3 chr5 36606541 + Exonic hg19 LGG TCGA-CS-5395-01A 3 1 Out-of-frame Inter-chr p35.2 p13.2 71919 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDC3-ZNF827 SDC3 chr1 31342314 - ZNF827 chr4 146859787 - Exonic hg19 LGG TCGA-HT-8564-01A 2 10 Out-of-frame Inter-chr p35.2 q31.22 Transcription factor 71920 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDC4-AP1G2 SDC4 chr20 43953928 - AP1G2 chr14 24037279 - Exonic hg19 LUAD TCGA-97-8171-01A 2 3 3'UTR-5'UTR Inter-chr q13.12 q11.2 71921 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDC4-EIF2AK2 SDC4 chr20 43953928 - EIF2AK2 chr2 37342384 - Exonic hg19 KIRC TCGA-B0-5691-01A 2 3 Out-of-frame Inter-chr q13.12 p22.2 71922 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDC4-NRG1 SDC4 chr20 43959006 - NRG1 chr8 32585467 + Exonic hg19 LUAD TCGA-86-7954-01A 2728 3527 In-Frame Inter-chr q13.12 p12 KB Pub Seq+ 71923 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDC4-SPCS1 SDC4 chr20 43976965 - SPCS1 chr3 52740660 + Exonic hg19 GBM TCGA-12-5295-01A 55 141 In-Frame Inter-chr q13.12 p21.1 Seq+ 71924 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDC4-TP53TG5 SDC4 chr20 43976965 - TP53TG5 chr20 44006253 - Exonic hg19 STAD TCGA-HU-A4HD-01A 16 170 In-Frame Intra-chr q13.12 q13.12 Seq+ 71925 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDC4-TSHZ2 SDC4 chr20 43976965 - TSHZ2 chr20 52103683 + Exonic hg19 LUAD TCGA-80-5608-01A 8 5 CDS-3'UTR Intra-chr q13.12 q13.2 Transcription factor Seq+ 71926 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDC4-YWHAB SDC4 chr20 43976965 - YWHAB chr20 43532634 + Exonic hg19 LUAD TCGA-97-8177-01A 43 18 In-Frame Intra-chr q13.12 q13.12 Seq+ 71927 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDCBP-BIRC6 SDCBP chr8 59495417 - BIRC6 chr2 32820101 + Exonic hg19 SKCM TCGA-EE-A29E-06A 2 14 3'UTR-CDS Inter-chr q12.1 p22.3 71928 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDCBP-ESF1 SDCBP chr8 59495417 - ESF1 chr20 13743523 - Exonic hg19 SKCM TCGA-ER-A19H-06A 2 12 Out-of-frame Inter-chr q12.1 p12.1 71929 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDCCAG8-C1orf101 SDCCAG8 chr1 243581378 - C1orf101 chr1 244715624 + Exonic hg19 BRCA TCGA-BH-A1F6-01A 3 2 In-Frame Intra-chr Seq+ 71930 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDCCAG8-CEP170 SDCCAG8 chr1 243419542 - CEP170 chr1 243336148 - Exonic hg19 HNSC TCGA-BA-4074-01A 2 1 Out-of-frame Intra-chr 71931 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDCCAG8-DCAF6 SDCCAG8 chr1 243542165 - DCAF6 chr1 168034828 + Exonic hg19 LIHC TCGA-DD-A4NE-01A 2 3 Out-of-frame Intra-chr q24.2 Seq+ 71932 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDCCAG8-TFB2M SDCCAG8 chr1 243437958 - TFB2M chr1 246714604 - Exonic hg19 SKCM TCGA-ER-A197-06A 17 18 In-Frame Intra-chr q44 Seq+ 71933 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDF2-MAP2K6 SDF2 chr17 26982305 - MAP2K6 chr17 67532256 + Exonic hg19 BRCA TCGA-E9-A22D-01A 41 28 Out-of-frame Intra-chr q11.2 q24.3 STE:STE7 Seq+ 71934 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDF2-MSI2 SDF2 chr17 26982305 - MSI2 chr17 55334459 + Exonic hg19 BRCA TCGA-3C-AALI-01A 2 5 Out-of-frame Intra-chr q11.2 q22 Seq+ 71935 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDF2-RPTOR SDF2 chr17 26988744 - RPTOR chr17 78599491 + Exonic hg19 BRCA TCGA-A2-A0YE-01A 24 7 Out-of-frame Intra-chr q11.2 q25.3 Seq+ 71936 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDHAF2-C11orf85 SDHAF2 chr11 61205585 - C11orf85 chr11 64727607 - Exonic hg19 BRCA TCGA-EW-A1IW-01A 17 10 Out-of-frame Intra-chr q12.2 Seq+ 71937 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDHAF2-RIN1 SDHAF2 chr11 61205585 - RIN1 chr11 66101129 - Exonic hg19 BRCA TCGA-A8-A06N-01A 74 28 In-Frame Intra-chr q12.2 q13.2 Seq+ 71938 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDHAF2-TPH1 SDHAF2 chr11 61205585 - TPH1 chr11 18062335 - Exonic hg19 SARC TCGA-X6-A8C3-01A 8 2 CDS-5'UTR Intra-chr q12.2 p15.1 Seq+ 71939 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDHB-PLN SDHB chr1 17380443 - PLN chr6 118879988 + Exonic hg19 LUAD TCGA-78-7153-01A 9 11 CDS-5'UTR Inter-chr p36.13 Oncogene Tumor suppressor gene q22.31 Seq+ 71940 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDK1-BRAT1 SDK1 chr7 3861215 - BRAT1 chr7 2583596 - Exonic hg19 SARC TCGA-DX-A23U-01A 6 6 In-Frame Intra-chr p22.2 p22.3 Seq+ 71941 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDK1-CHST12 SDK1 chr7 3861215 - CHST12 chr7 2472198 + Exonic hg19 PRAD TCGA-KK-A8ID-01A 24 24 5'UTR-5'UTR Intra-chr p22.2 p22.3 Seq+ 71942 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SDK2-TMTC2 SDK2 chr17 71375316 - TMTC2 chr12 83250789 + Exonic hg19 SARC TCGA-DX-AB2H-01A 21 11 Out-of-frame Inter-chr q25.1 q21.31 Seq+ 71943 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC11A-VPS33B SEC11A chr15 85259256 - VPS33B chr15 91546361 - Exonic hg19 SKCM TCGA-DA-A1HW-06A 419 237 Out-of-frame Intra-chr q25.3 q26.1 Seq+ 71944 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC14L1-GALK1 SEC14L1 chr17 75139741 - GALK1 chr17 73760167 - Exonic hg19 LUAD TCGA-50-6590-01A 2 1 In-Frame Intra-chr q25.2 q25.1 71945 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC14L1-MGAT5B SEC14L1 chr17 75139741 - MGAT5B chr17 74921048 + Exonic hg19 STAD TCGA-CG-4449-01A 9 11 Out-of-frame Intra-chr q25.2 q25.2 Seq+ 71946 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC14L1-SPOP SEC14L1 chr17 75089429 - SPOP chr17 47700238 - Exonic hg19 LUSC TCGA-66-2783-01A 12 3 5'UTR-5'UTR Intra-chr q25.2 q21.33 Oncogene Tumor suppressor gene Seq+ 71947 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC14L1-TEX2 SEC14L1 chr17 75139741 - TEX2 chr17 62254831 - Exonic hg19 BRCA TCGA-AC-A8OP-01A 16 7 In-Frame Intra-chr q25.2 q23.3 Seq+ 71948 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC14L2-CCDC157 SEC14L2 chr22 30812392 - CCDC157 chr22 30757950 + Exonic hg19 LIHC TCGA-DD-AADL-01A 34 9 CDS-5'UTR Intra-chr q12.2 Tumor suppressor gene q12.2 Seq+ 71949 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC16A-FAM195B SEC16A chr9 139366427 - FAM195B chr17 79782430 - Exonic hg19 CESC TCGA-VS-A9UT-01A 3 6 CDS-5'UTR Inter-chr q34.3 71950 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC16A-NOTCH1 SEC16A chr9 139357339 - NOTCH1 chr9 139438554 - Exonic hg19 THCA TCGA-DJ-A2Q3-01A 4 4 Out-of-frame Intra-chr q34.3 q34.3 Oncogene Tumor suppressor gene KB Pub Seq+ 71951 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC16A-NOTCH1 SEC16A chr9 139353586 - NOTCH1 chr9 139418431 - Exonic hg19 LUSC TCGA-NC-A5HK-01A 11 1 Out-of-frame Intra-chr q34.3 q34.3 Oncogene Tumor suppressor gene KB Pub Seq+ 71952 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC16A-RXRA SEC16A chr9 139353586 - RXRA chr9 137293478 + Exonic hg19 SARC TCGA-DX-A3LS-01A 19 6 Out-of-frame Intra-chr q34.3 q34.2 Transcription factor Seq+ 71953 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC16A-SLCO5A1 SEC16A chr9 139353586 - SLCO5A1 chr8 70650439 - Exonic hg19 SARC TCGA-3B-A9HL-01A 2 1 Out-of-frame Inter-chr q34.3 q13.3 71954 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC16A-ZNF133 SEC16A chr9 139334553 - ZNF133 chr20 18278933 + Exonic hg19 LUAD TCGA-44-7671-01A 2 2 3'UTR-5'UTR Inter-chr q34.3 p11.23 Transcription factor 71955 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC22A-TXNRD3 SEC22A chr3 122944144 - TXNRD3 chr3 126352894 - Exonic hg19 LUSC TCGA-56-A4ZK-01A 20 9 In-Frame Intra-chr q21.1 q21.3 Seq+ 71956 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC22C-MRPS28 SEC22C chr3 42623338 - MRPS28 chr8 80831383 - Exonic hg19 SKCM TCGA-FS-A1ZZ-06A 134 82 5'UTR-CDS Inter-chr p22.1 q21.13 Seq+ 71957 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC23A-TRAPPC6B SEC23A chr14 39509936 - TRAPPC6B chr14 39628754 - Exonic hg19 LUAD TCGA-49-4505-01A 2 1 In-Frame Intra-chr q21.1 q21.1 71958 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC23B-CNGB3 SEC23B chr20 18516386 - CNGB3 chr8 87751964 - Exonic hg19 LUSC TCGA-37-A5EL-01A 13 1 In-Frame Inter-chr p11.23 q21.3 71959 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC23B-CSRP2BP SEC23B chr20 18496380 - CSRP2BP chr20 18162354 + Exonic hg19 PRAD TCGA-CH-5751-01A 16 17 In-Frame Intra-chr p11.23 Seq+ 71960 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC23B-CSRP2BP SEC23B chr20 18496380 - CSRP2BP chr20 18162354 + Exonic hg19 ESCA TCGA-L5-A4ON-01A 5 56 In-Frame Intra-chr p11.23 Seq+ 71961 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC23B-NAPB SEC23B chr20 18488634 - NAPB chr20 23361954 - Exonic hg19 SARC TCGA-DX-A6YZ-01A 2 5 5'UTR-CDS Intra-chr p11.23 p11.21 Seq+ 71962 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC23B-PLEKHM3 SEC23B chr20 18516386 - PLEKHM3 chr2 208693220 - Exonic hg19 LUSC TCGA-46-6025-01A 8 4 Out-of-frame Inter-chr p11.23 q33.3 71963 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC23B-ZCCHC7 SEC23B chr20 18506576 - ZCCHC7 chr9 37349354 + Exonic hg19 HNSC TCGA-CV-A45T-01A 16 16 In-Frame Inter-chr p11.23 p13.2 Seq+ 71964 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC23IP-C10orf93 SEC23IP chr10 121685739 - C10orf93 chr10 134628418 - Exonic hg19 LUAD TCGA-44-8120-01A 4 2 Out-of-frame Intra-chr q26.11 71965 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC24A-C10orf11 SEC24A chr5 133984863 - C10orf11 chr10 77795766 + Exonic hg19 PRAD TCGA-YL-A8SA-01A 19 17 Out-of-frame Inter-chr q31.1 Seq+ 71966 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC24A-CDH18 SEC24A chr5 133984863 - CDH18 chr5 19544114 - Exonic hg19 SARC TCGA-DX-A7EU-01A 2 1 Out-of-frame Intra-chr q31.1 p14.3 71967 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC24A-KCNK7 SEC24A chr5 133984863 - KCNK7 chr11 65361345 - Exonic hg19 LGG TCGA-VM-A8CD-01A 118 66 In-Frame Inter-chr q31.1 q13.1 Seq+ 71968 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC24A-PHF15 SEC24A chr5 134053863 - PHF15 chr5 133912458 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 36 14 Out-of-frame Intra-chr q31.1 Seq+ 71969 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC24C-CCT5 SEC24C chr10 75531919 - CCT5 chr5 10250033 + Exonic hg19 CESC TCGA-JW-A5VI-01A 2 1 Out-of-frame Inter-chr q22.2 p15.2 71970 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC24C-SEPT10 SEC24C chr10 75531919 - SEPT10 chr2 110343415 - Exonic hg19 PRAD TCGA-EJ-7327-01A 2 1 3'UTR-CDS Inter-chr q22.2 q13 71971 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC24D-CFI SEC24D chr4 119718838 - CFI chr4 110687980 - Exonic hg19 BRCA TCGA-A2-A3XZ-01A 11 10 In-Frame Intra-chr q26 q25 Seq+ 71972 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC24D-PLRG1 SEC24D chr4 119673151 - PLRG1 chr4 155457896 - Exonic hg19 BRCA TCGA-AO-A1KR-01A 18 14 In-Frame Intra-chr q26 q31.3 Seq+ 71973 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC24D-RP11-455G16.1 SEC24D chr4 119718838 - RP11-455G16.1 chr4 120116723 - Exonic hg19 OV TCGA-23-1032-01A 3 3 Out-of-frame Intra-chr q26 71974 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC31A-AGMO SEC31A chr4 83801952 - AGMO chr7 15405244 - Exonic hg19 LUSC TCGA-77-8131-01A 2 3 In-Frame Inter-chr q21.22 p21.2 71975 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC31A-ANAPC10 SEC31A chr4 83739815 - ANAPC10 chr4 145985844 - Exonic hg19 PRAD TCGA-HC-A6AP-01A 5 1 3'UTR-CDS Intra-chr q21.22 q31.21 Seq+ 71976 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC31A-EIF4G3 SEC31A chr4 83763293 - EIF4G3 chr1 21377487 - Exonic hg19 UCEC TCGA-AX-A3GI-01A 2 3 CDS-5'UTR Inter-chr q21.22 p36.12 Seq+ 71977 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC31A-FAM175A SEC31A chr4 83812241 - FAM175A chr4 84403397 - Exonic hg19 ESCA TCGA-L5-A4OQ-01A 3 10 Out-of-frame Intra-chr q21.22 q21.23 Seq+ 71978 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC31A-MUC7 SEC31A chr4 83778105 - MUC7 chr4 71337932 + Exonic hg19 BRCA TCGA-A8-A09A-01A 56 60 CDS-5'UTR Intra-chr q21.22 q13.3 Seq+ 71979 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC31B-GRID1 SEC31B chr10 102265118 - GRID1 chr10 87407154 - Exonic hg19 BRCA TCGA-S3-AA11-01A 8 8 Out-of-frame Intra-chr q24.31 q23.2 Seq+ 71980 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC61A1-EIF2AK2 SEC61A1 chr3 127790525 - EIF2AK2 chr2 37342384 - Exonic hg19 LUAD TCGA-97-7547-01A 2 12 Out-of-frame Inter-chr q21.3 p22.2 71981 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC61A1-ELK3 SEC61A1 chr3 127790525 - ELK3 chr12 96588323 + Exonic hg19 UCS TCGA-NA-A4QV-01A 2 8 Out-of-frame Inter-chr q21.3 q23.1 Transcription factor 71982 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC61A1-INPP4B SEC61A1 chr3 127786902 - INPP4B chr4 142950067 - Exonic hg19 SARC TCGA-DX-A3UA-01A 92 41 In-Frame Inter-chr q21.3 q31.21 Tumor suppressor gene Seq+ 71983 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC62-PHC3 SEC62 chr3 169703653 - PHC3 chr3 169840532 - Exonic hg19 UCEC TCGA-AX-A2H4-01A 4 3 Out-of-frame Intra-chr q26.2 q26.2 Tumor suppressor gene 71984 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC63-FIG4 SEC63 chr6 108197768 - FIG4 chr6 110106173 + Exonic hg19 LAML TCGA-AB-2901-03A 2 4 Out-of-frame Intra-chr q21 q21 Seq+ 71985 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEC63-PCBP2 SEC63 chr6 108214686 - PCBP2 chr12 53853056 + Exonic hg19 STAD TCGA-RD-A8MW-01A 2 50 In-Frame Inter-chr q21 q13.13 Seq+ 71986 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SECISBP2-NEDD4L SECISBP2 chr9 91956394 - NEDD4L chr18 56063399 + Exonic hg19 LUAD TCGA-86-8075-01A 49 21 Out-of-frame Inter-chr q22.2 q21.31 Tumor suppressor gene Seq+ 71987 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEH1L-IMPA2 SEH1L chr18 12951904 - IMPA2 chr18 11999053 + Exonic hg19 PAAD TCGA-IB-A7M4-01A 34 26 In-Frame Intra-chr p11.21 p11.21 Seq+ 71988 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEL1L-ANGEL1 SEL1L chr14 81952016 - ANGEL1 chr14 77275986 - Exonic hg19 PRAD TCGA-J4-AATZ-01A 36 24 In-Frame Intra-chr q31.1 q24.3 Seq+ 71989 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEL1L-FNTB SEL1L chr14 81950569 - FNTB chr14 65390709 + Exonic hg19 SARC TCGA-DX-AB2P-01A 42 10 CDS-5'UTR Intra-chr q31.1 q23.3 71990 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEL1L-MIOS SEL1L chr14 82000019 - MIOS chr7 7625267 + Exonic hg19 OV TCGA-59-A5PD-01A 6 104 In-Frame Inter-chr q31.1 p21.3 Seq+ 71991 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEL1L-SERTAD2 SEL1L chr14 81993077 - SERTAD2 chr2 64864009 - Exonic hg19 LUAD TCGA-67-6217-01A 8 2 CDS-5'UTR Inter-chr q31.1 p14 Seq+ 71992 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEL1L3-CCKAR SEL1L3 chr4 25759156 - CCKAR chr4 26484905 - Exonic hg19 STAD TCGA-VQ-A925-01A 2 53 Out-of-frame Intra-chr p15.2 p15.2 Seq+ 71993 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEL1L3-HSD17B13 SEL1L3 chr4 25835070 - HSD17B13 chr4 88239588 - Exonic hg19 PAAD TCGA-HZ-A49I-01A 18 1 Out-of-frame Intra-chr p15.2 q22.1 Seq+ 71994 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA3B-ALS2CR12 SEMA3B chr3 50308911 - ALS2CR12 chr2 202154508 - Exonic hg19 STAD TCGA-D7-A4YU-01A 4 21 In-Frame Inter-chr p21.31 Tumor suppressor gene q33.1 Seq+ 71995 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA3C-AUTS2 SEMA3C chr7 80418622 - AUTS2 chr7 69900738 + Exonic hg19 BRCA TCGA-B6-A0IC-01A 3 6 Out-of-frame Intra-chr q21.11 q11.22 Seq+ 71996 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA3C-CD36 SEMA3C chr7 80545995 - CD36 chr7 80115783 + Exonic hg19 LUSC TCGA-22-5492-01A 15 4 CDS-5'UTR Intra-chr q21.11 q21.11 Seq+ 71997 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA3C-CNTNAP2 SEMA3C chr7 80545995 - CNTNAP2 chr7 148112509 + Exonic hg19 BRCA TCGA-E2-A1LL-01A 4 5 In-Frame Intra-chr q21.11 Tumor suppressor gene Seq+ 71998 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA3C-PPP1R12C SEMA3C chr7 80418622 - PPP1R12C chr19 55614936 - Exonic hg19 SKCM TCGA-D3-A1Q4-06A 126 8 In-Frame Inter-chr q21.11 q13.42 Seq+ 71999 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA3D-KCNU1 SEMA3D chr7 84727121 - KCNU1 chr8 36721922 + Exonic hg19 LUSC TCGA-77-A5G7-01B 5 1 Out-of-frame Inter-chr q21.11 p11.23 Seq+ 72000 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA3D-RBM28 SEMA3D chr7 84782924 - RBM28 chr7 127979845 - Exonic hg19 PRAD TCGA-CH-5788-01A 14 11 5'UTR-CDS Intra-chr q21.11 q32.1 Seq+ 72001 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA3E-TSGA14 SEMA3E chr7 83277744 - TSGA14 chr7 130056807 - Exonic hg19 SKCM TCGA-FS-A1ZB-06A 19 23 Out-of-frame Intra-chr q21.11 72002 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA3F-RBM6 SEMA3F chr3 50197167 - RBM6 chr3 50085678 + Exonic hg19 LUSC TCGA-37-4135-01A 17 10 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene Seq+ 72003 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA3F-RBM6 SEMA3F chr3 50212621 - RBM6 chr3 50085678 + Exonic hg19 LUAD TCGA-55-6969-01A 33 36 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene Seq+ 72004 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA3F-RBM6 SEMA3F chr3 50214294 - RBM6 chr3 50095161 + Exonic hg19 UCS TCGA-N5-A4RO-01A 2 1 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene Seq+ 72005 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA3F-RNF123 SEMA3F chr3 50197167 - RNF123 chr3 49742083 + Exonic hg19 ESCA TCGA-VR-A8Q7-01A 2 14 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 72006 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA4B-CERS3 SEMA4B chr15 90761061 - CERS3 chr15 100943070 - Exonic hg19 LUAD TCGA-J2-A4AD-01A 13 6 In-Frame Intra-chr q26.1 q26.3 Seq+ 72007 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA4B-CIB2 SEMA4B chr15 90728313 - CIB2 chr15 78403618 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 21 287 5'UTR-CDS Intra-chr q26.1 q25.1 Seq+ 72008 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA4B-PIAS1 SEMA4B chr15 90728313 - PIAS1 chr15 68479880 + Exonic hg19 PRAD TCGA-ZG-A9KY-01A 3 1 5'UTR-CDS Intra-chr q26.1 q23 Tumor suppressor gene Seq+ 72009 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA4B-WDR93 SEMA4B chr15 90728313 - WDR93 chr15 90255257 + Exonic hg19 KIRC TCGA-B0-4690-01A 3 1 5'UTR-CDS Intra-chr q26.1 q26.1 72010 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA4B-ZNF710 SEMA4B chr15 90728313 - ZNF710 chr15 90610342 + Exonic hg19 LUAD TCGA-99-8033-01A 3 2 5'UTR-5'UTR Intra-chr q26.1 q26.1 Transcription factor Seq+ 72011 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA4B-ZNF710 SEMA4B chr15 90728313 - ZNF710 chr15 90622892 + Exonic hg19 STAD TCGA-BR-7901-01A 4 6 5'UTR-CDS Intra-chr q26.1 q26.1 Transcription factor Seq+ 72012 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA4B-ZNF710 SEMA4B chr15 90764997 - ZNF710 chr15 90610342 + Exonic hg19 LIHC TCGA-WJ-A86L-01A 20 10 CDS-5'UTR Intra-chr q26.1 q26.1 Transcription factor Seq+ 72013 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA4C-FAM178B SEMA4C chr2 97527316 - FAM178B chr2 97568444 - Exonic hg19 LUSC TCGA-66-2793-01A 23 13 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 72014 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA4C-FAM178B SEMA4C chr2 97535613 - FAM178B chr2 97613639 - Exonic hg19 BLCA TCGA-E7-A5KE-01A 18 34 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 72015 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA4C-FAM178B SEMA4C chr2 97529419 - FAM178B chr2 97544230 - Exonic hg19 BLCA TCGA-ZF-A9RD-01A 2 1 In-Frame Intra-chr q11.2 q11.2 Seq+ 72016 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA4C-WNT5B SEMA4C chr2 97529419 - WNT5B chr12 1740464 + Exonic hg19 BRCA TCGA-AO-A124-01A 13 12 CDS-5'UTR Inter-chr q11.2 p13.33 Seq+ 72017 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA4D-RGS3 SEMA4D chr9 92112834 - RGS3 chr9 116241771 + Exonic hg19 PRAD TCGA-XQ-A8TA-01A 2 2 5'UTR-CDS Intra-chr q22.2 q32 72018 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA5A-RBFOX2 SEMA5A chr5 9545696 - RBFOX2 chr22 36157515 - Exonic hg19 SKCM TCGA-EB-A5KH-06A 33 9 5'UTR-CDS Inter-chr p15.31 Seq+ 72019 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA5A-SLC6A19 SEMA5A chr5 9066533 - SLC6A19 chr5 1208861 + Exonic hg19 SARC TCGA-FX-A2QS-01A 94 30 In-Frame Intra-chr p15.31 p15.33 Seq+ 72020 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA5B-PLS1 SEMA5B chr3 122667353 - PLS1 chr3 142422710 + Exonic hg19 KIRP TCGA-G7-6793-01A 37 27 Out-of-frame Intra-chr q21.1 q23 Seq+ 72021 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA6A-DTWD2 SEMA6A chr5 115909881 - DTWD2 chr5 118280344 - Exonic hg19 BRCA TCGA-BH-A0HI-01A 3 2 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 72022 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA6A-LSM6 SEMA6A chr5 115822445 - LSM6 chr4 147104064 + Exonic hg19 BRCA TCGA-A8-A08I-01A 14 7 CDS-5'UTR Inter-chr q23.1 q31.22 Seq+ 72023 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEMA6D-EXD1 SEMA6D chr15 48009889 - EXD1 chr15 41488053 - Exonic hg19 LGG TCGA-DU-A7TC-01A 5 4 5'UTR-CDS Intra-chr q21.1 q15.1 72024 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SENP2-ABR SENP2 chr3 185307957 - ABR chr17 915225 - Exonic hg19 BLCA TCGA-DK-A6B2-01A 30 21 Out-of-frame Inter-chr q27.2 p13.3 Seq+ 72025 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SENP2-ANKRD27 SENP2 chr3 185304302 - ANKRD27 chr19 33133051 - Exonic hg19 LUSC TCGA-21-1071-01A 8 6 In-Frame Inter-chr q27.2 q13.11 Seq+ 72026 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SENP2-CLCN2 SENP2 chr3 185304302 - CLCN2 chr3 184076919 - Exonic hg19 LUAD TCGA-91-8499-01A 6 1 Out-of-frame Intra-chr q27.2 q27.1 72027 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SENP2-MSH5 SENP2 chr3 185316812 - MSH5 chr6 31726543 + Exonic hg19 ACC TCGA-OR-A5K5-01A 4 5 In-Frame Inter-chr q27.2 Seq+ 72028 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SENP2-VPS8 SENP2 chr3 185307957 - VPS8 chr3 184742124 + Exonic hg19 LUSC TCGA-56-8628-01A 593 247 Out-of-frame Intra-chr q27.2 q27.2 Seq+ 72029 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SENP3-ABR SENP3 chr17 7470322 - ABR chr17 962107 - Exonic hg19 COAD TCGA-CM-6163-01A 29 18 In-Frame Intra-chr p13.1 p13.3 Seq+ 72030 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SENP5-KCNMB3 SENP5 chr3 196657771 - KCNMB3 chr3 178962481 - Exonic hg19 HNSC TCGA-TN-A7HJ-01A 3 1 Out-of-frame Intra-chr q29 q26.32 Seq+ 72031 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SENP5-PIGZ SENP5 chr3 196613565 - PIGZ chr3 196678902 - Exonic hg19 BRCA TCGA-AO-A129-01A 58 24 CDS-5'UTR Intra-chr q29 q29 Seq+ 72032 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SENP5-TCTEX1D2 SENP5 chr3 196594944 - TCTEX1D2 chr3 196033883 - Exonic hg19 LUAD TCGA-78-7147-01A 26 23 5'UTR-CDS Intra-chr q29 q29 Seq+ 72033 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SENP6-ACACB SENP6 chr6 76333676 - ACACB chr12 109680242 + Exonic hg19 PRAD TCGA-YL-A9WJ-01A 29 33 CDS-3'UTR Inter-chr q14.1 q24.11 Seq+ 72034 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SENP6-AKIRIN2 SENP6 chr6 76388643 - AKIRIN2 chr6 88385325 - Exonic hg19 SARC TCGA-WK-A8XO-01A 44 31 Out-of-frame Intra-chr q14.1 q15 Seq+ 72035 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SENP6-BAI3 SENP6 chr6 76312292 - BAI3 chr6 70064125 + Exonic hg19 SARC TCGA-DX-AATS-01A 17 12 Out-of-frame Intra-chr q14.1 Seq+ 72036 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SENP6-GPR124 SENP6 chr6 76373234 - GPR124 chr8 37672414 + Exonic hg19 BRCA TCGA-D8-A27R-01A 8 5 Out-of-frame Inter-chr q14.1 Seq+ 72037 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SENP6-KATNA1 SENP6 chr6 76357517 - KATNA1 chr6 149959696 - Exonic hg19 UCEC TCGA-AJ-A3IA-01A 3 4 CDS-5'UTR Intra-chr q14.1 q25.1 Seq+ 72038 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SENP6-OOEP SENP6 chr6 76344527 - OOEP chr6 74079108 - Exonic hg19 PRAD TCGA-HC-7210-01A 60 43 Out-of-frame Intra-chr q14.1 q13 Seq+ 72039 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SENP6-PPIL6 SENP6 chr6 76407233 - PPIL6 chr6 109752548 - Exonic hg19 LUSC TCGA-52-7810-01A 6 7 Out-of-frame Intra-chr q14.1 q21 Seq+ 72040 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SENP6-SLC35A1 SENP6 chr6 76312292 - SLC35A1 chr6 88210226 + Exonic hg19 BRCA TCGA-A2-A04T-01A 2 2 Out-of-frame Intra-chr q14.1 q15 Seq+ 72041 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SENP7-RFC4 SENP7 chr3 101046510 - RFC4 chr3 186515403 - Exonic hg19 BRCA TCGA-AO-A129-01A 4 3 In-Frame Intra-chr q12.3 q27.3 Seq+ 72042 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPP1-C16orf45 SEPP1 chr5 42799982 - C16orf45 chr16 15675074 + Exonic hg19 LIHC TCGA-BC-A10X-01A 2 2 3'UTR-CDS Inter-chr 72043 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPP1-C7 SEPP1 chr5 42799982 - C7 chr5 40954982 + Exonic hg19 KICH TCGA-KN-8432-01A 2 44 3'UTR-CDS Intra-chr p13.1 Tumor suppressor gene 72044 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPP1-EIF2AK2 SEPP1 chr5 42799982 - EIF2AK2 chr2 37342384 - Exonic hg19 BRCA TCGA-BH-A1F0-01A 2 22 3'UTR-CDS Inter-chr p22.2 72045 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT10-LRCH1 SEPT10 chr2 110343298 - LRCH1 chr13 47255876 + Exonic hg19 SARC TCGA-DX-A8BM-01A 9 17 Out-of-frame Inter-chr q13 q14.13 Seq+ 72046 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT10-PLCD4 SEPT10 chr2 110371375 - PLCD4 chr2 219480430 + Exonic hg19 LGG TCGA-CS-6666-01A 2 1 CDS-5'UTR Intra-chr q13 q35 72047 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT10-SH3RF3 SEPT10 chr2 110310664 - SH3RF3 chr2 110015046 + Exonic hg19 LUSC TCGA-LA-A7SW-01A 3 5 In-Frame Intra-chr q13 q13 Seq+ 72048 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT11-GARNL3 SEPT11 chr4 77936170 - GARNL3 chr9 130005358 + Exonic hg19 ESCA TCGA-L5-A4OS-01A 2 13 Out-of-frame Inter-chr q21.1 q33.3 Seq+ 72049 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT14-UPP1 SEPT14 chr7 55929636 - UPP1 chr7 48141421 + Exonic hg19 LGG TCGA-DU-A5TY-01A 6 4 In-Frame Intra-chr p11.2 p12.3 Seq+ 72050 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT3-EIF2AK2 SEPT3 chr22 42394225 - EIF2AK2 chr2 37342384 - Exonic hg19 LGG TCGA-DB-5273-01A 2 1 Out-of-frame Inter-chr q13.2 p22.2 72051 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT6-CUL4B SEPT6 chrX 118763281 - CUL4B chrX 119708485 - Exonic hg19 BLCA TCGA-K4-A3WV-01A 3 2 CDS-5'UTR Intra-chr q24 q24 Seq+ 72052 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT7-ICA1 SEPT7 chr7 35913385 - ICA1 chr7 8198282 - Exonic hg19 COAD TCGA-A6-5656-01A 3 3 In-Frame Intra-chr p14.2 p21.3 Seq+ 72053 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT9-AC217773.1 SEPT9 chr17 75303279 - AC217773.1 chr17 44273734 + Exonic hg19 BRCA TCGA-D8-A27G-01A 49 77 Out-of-frame Intra-chr 72054 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT9-ARSG SEPT9 chr17 75303279 - ARSG chr17 66339745 + Exonic hg19 BRCA TCGA-BH-A1ES-06A 60 18 Out-of-frame Intra-chr q24.2 Seq+ 72055 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT9-BAIAP2 SEPT9 chr17 75303279 - BAIAP2 chr17 79089570 + Exonic hg19 ESCA TCGA-L5-A4OW-01A 8 75 Out-of-frame Intra-chr q25.3 Seq+ 72056 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT9-BCAS3 SEPT9 chr17 75398785 - BCAS3 chr17 59445688 + Exonic hg19 UVM TCGA-WC-A884-01A 155 77 In-Frame Intra-chr q23.2 Seq+ 72057 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT9-COL7A1 SEPT9 chr17 75303279 - COL7A1 chr3 48624122 - Exonic hg19 MESO TCGA-3H-AB3M-01A 117 60 Out-of-frame Inter-chr p21.31 Seq+ 72058 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT9-CRAT SEPT9 chr17 75303279 - CRAT chr9 131866585 - Exonic hg19 PRAD TCGA-KC-A4BV-01A 10 3 Out-of-frame Inter-chr q34.11 Seq+ 72059 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT9-DNAH17 SEPT9 chr17 75496674 - DNAH17 chr17 76435299 - Exonic hg19 LUAD TCGA-50-5946-01A 5 1 3'UTR-CDS Intra-chr q25.3 72060 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT9-DNAI2 SEPT9 chr17 75398785 - DNAI2 chr17 72285733 + Exonic hg19 SARC TCGA-QC-A6FX-01A 5 3 Out-of-frame Intra-chr q25.1 Seq+ 72061 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT9-JMJD6 SEPT9 chr17 75277636 - JMJD6 chr17 74721937 - Exonic hg19 BRCA TCGA-A7-A2KD-01A 74 130 Out-of-frame Intra-chr q25.1 Seq+ 72062 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT9-KRT32 SEPT9 chr17 75316430 - KRT32 chr17 39620695 - Exonic hg19 THCA TCGA-CE-A27D-01A 2 1 Out-of-frame Intra-chr q21.2 72063 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT9-LPP SEPT9 chr17 75303279 - LPP chr3 188202380 + Exonic hg19 BRCA TCGA-EW-A1OZ-01A 6 3 In-Frame Inter-chr q27.3 Oncogene Seq+ 72064 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT9-METTL2A SEPT9 chr17 75398785 - METTL2A chr17 60522198 + Exonic hg19 COAD TCGA-D5-6929-01A 5 1 Out-of-frame Intra-chr q23.2 Seq+ 72065 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT9-MGAT5B SEPT9 chr17 75369634 - MGAT5B chr17 74934070 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 70 63 Out-of-frame Intra-chr q25.2 Seq+ 72066 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT9-MPO SEPT9 chr17 75303279 - MPO chr17 56353063 - Exonic hg19 LUAD TCGA-05-5429-01A 4 3 In-Frame Intra-chr q22 Seq+ 72067 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT9-MYH13 SEPT9 chr17 75303279 - MYH13 chr17 10263505 - Exonic hg19 LIHC TCGA-4R-AA8I-01A 12 7 In-Frame Intra-chr p13.1 Seq+ 72068 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT9-NARF SEPT9 chr17 75303279 - NARF chr17 80430440 + Exonic hg19 BRCA TCGA-BH-A0DG-01A 63 47 In-Frame Intra-chr q25.3 Seq+ 72069 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT9-NPRL3 SEPT9 chr17 75277636 - NPRL3 chr16 162774 - Exonic hg19 UCS TCGA-ND-A4W6-01A 4 1 In-Frame Inter-chr p13.3 72070 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT9-SEC14L1 SEPT9 chr17 75303279 - SEC14L1 chr17 75186885 + Exonic hg19 OV TCGA-13-1405-01A 44 12 Out-of-frame Intra-chr q25.2 Seq+ 72071 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT9-SEC14L1 SEPT9 chr17 75398785 - SEC14L1 chr17 75186885 + Exonic hg19 BRCA TCGA-A7-A26G-01A 25 4 Out-of-frame Intra-chr q25.2 Seq+ 72072 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT9-SEC14L1 SEPT9 chr17 75303279 - SEC14L1 chr17 75201358 + Exonic hg19 BRCA TCGA-D8-A1JF-01A 74 113 Out-of-frame Intra-chr q25.2 Seq+ 72073 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT9-SEC14L1 SEPT9 chr17 75303279 - SEC14L1 chr17 75085235 + Exonic hg19 PRAD TCGA-ZG-A9LN-01A 8 2 5'UTR-5'UTR Intra-chr q25.2 Seq+ 72074 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT9-TANC2 SEPT9 chr17 75277636 - TANC2 chr17 61457079 + Exonic hg19 BRCA TCGA-E2-A1B0-01A 5 13 Out-of-frame Intra-chr q23.2 Seq+ 72075 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT9-UBTF SEPT9 chr17 75496674 - UBTF chr17 42288699 - Exonic hg19 READ TCGA-AH-6549-01A 2 1 3'UTR-3'UTR Intra-chr q21.31 72076 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPT9-VAV1 SEPT9 chr17 75369634 - VAV1 chr19 6836443 + Exonic hg19 ACC TCGA-OR-A5JA-01A 3 3 In-Frame Inter-chr p13.3 72077 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SEPX1-ALB SEPX1 chr16 1989020 - ALB chr4 74270004 + Exonic hg19 LIHC TCGA-DD-AADK-01A 2 1 Out-of-frame Inter-chr q13.3 72078 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERF2-GPN2 SERF2 chr15 44091305 - GPN2 chr1 27210781 - Exonic hg19 PRAD TCGA-V1-A8WN-01A 17 4 3'UTR-CDS Inter-chr q15.3 p36.11 Seq+ 72079 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERGEF-ANKRD29 SERGEF chr11 17981017 - ANKRD29 chr18 21229157 - Exonic hg19 LUAD TCGA-73-4666-01A 55 13 In-Frame Inter-chr p15.1 q11.2 Seq+ 72080 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERGEF-HBE1 SERGEF chr11 18010144 - HBE1 chr11 5291386 - Exonic hg19 SARC TCGA-DX-A1KU-01A 2 2 CDS-5'UTR Intra-chr p15.1 p15.4 Seq+ 72081 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERGEF-KCNC1 SERGEF chr11 17981017 - KCNC1 chr11 17793212 + Exonic hg19 SKCM TCGA-DA-A1HW-06A 7 1 In-Frame Intra-chr p15.1 p15.1 Seq+ 72082 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERINC2-ARHGEF1 SERINC2 chr1 31902385 - ARHGEF1 chr19 42398280 + Exonic hg19 BRCA TCGA-AC-A2BK-01A 5 3 In-Frame Inter-chr p35.2 q13.2 72083 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERINC2-EIF2AK2 SERINC2 chr1 31907521 - EIF2AK2 chr2 37342384 - Exonic hg19 BLCA TCGA-FD-A3SQ-01A 2 6 Out-of-frame Inter-chr p35.2 p22.2 72084 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERINC2-FN1 SERINC2 chr1 31907521 - FN1 chr2 216274837 - Exonic hg19 PRAD TCGA-HC-7231-01A 2 1 3'UTR-CDS Inter-chr p35.2 q35 Oncogene 72085 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERINC2-PFDN2 SERINC2 chr1 31886151 - PFDN2 chr1 161072165 - Exonic hg19 BLCA TCGA-DK-A6B2-01A 91 54 In-Frame Intra-chr p35.2 q23.3 Seq+ 72086 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERINC2-YY1 SERINC2 chr1 31907524 - YY1 chr14 100728641 + Exonic hg19 BLCA TCGA-E7-A677-01A 2 7 3'UTR-CDS Inter-chr p35.2 q32.2 Transcription factor 72087 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERINC2-ZCCHC17 SERINC2 chr1 31886151 - ZCCHC17 chr1 31836879 + Exonic hg19 LUSC TCGA-33-4566-01A 7 1 In-Frame Intra-chr p35.2 p35.2 Seq+ 72088 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERINC2-ZCCHC17 SERINC2 chr1 31907524 - ZCCHC17 chr1 31811804 + Exonic hg19 BLCA TCGA-4Z-AA7Q-01A 3 1 3'UTR-CDS Intra-chr p35.2 p35.2 Seq+ 72089 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERINC2-ZCCHC17 SERINC2 chr1 31901915 - ZCCHC17 chr1 31836879 + Exonic hg19 LUSC TCGA-66-2758-01A 85 23 Out-of-frame Intra-chr p35.2 p35.2 Seq+ 72090 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERINC2-ZNFX1 SERINC2 chr1 31907521 - ZNFX1 chr20 47863418 - Exonic hg19 LUAD TCGA-05-4396-01A 2 3 Out-of-frame Inter-chr p35.2 q13.13 72091 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERINC3-NCOA5 SERINC3 chr20 43139930 - NCOA5 chr20 44691528 - Exonic hg19 UCS TCGA-N8-A4PN-01A 138 82 In-Frame Intra-chr q13.12 q13.12 Tumor suppressor gene Seq+ 72092 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERINC3-TWSG1 SERINC3 chr20 43128899 - TWSG1 chr18 9396278 + Exonic hg19 BRCA TCGA-E9-A1NF-01A 3 2 3'UTR-CDS Inter-chr q13.12 p11.22 Seq+ 72093 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERINC5-CDYL2 SERINC5 chr5 79551715 - CDYL2 chr16 80719026 - Exonic hg19 PRAD TCGA-CH-5771-01A 2 4 In-Frame Inter-chr q14.1 q23.2 Seq+ 72094 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERINC5-CTC-236F12.4 SERINC5 chr5 79454659 - CTC-236F12.4 chr5 55753770 - Exonic hg19 BRCA TCGA-C8-A27A-01A 79 39 Out-of-frame Intra-chr q14.1 72095 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERINC5-MYO10 SERINC5 chr5 79498705 - MYO10 chr5 16704794 - Exonic hg19 SKCM TCGA-FW-A3I3-06A 8 10 In-Frame Intra-chr q14.1 p15.1 Seq+ 72096 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERINC5-PPAP2A SERINC5 chr5 79551715 - PPAP2A chr5 54721867 - Exonic hg19 PRAD TCGA-HC-A6AS-01A 54 68 In-Frame Intra-chr q14.1 Seq+ 72097 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERINC5-THBS4 SERINC5 chr5 79470777 - THBS4 chr5 79372678 + Exonic hg19 LUSC TCGA-77-7142-01A 121 69 In-Frame Intra-chr q14.1 q14.1 Seq+ 72098 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERINC5-TTC39A SERINC5 chr5 79462206 - TTC39A chr1 51787497 - Exonic hg19 PRAD TCGA-CH-5771-01A 60 43 Out-of-frame Inter-chr q14.1 p32.3 Seq+ 72099 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERINC5-ZFYVE16 SERINC5 chr5 79498705 - ZFYVE16 chr5 79723311 + Exonic hg19 KIRC TCGA-BP-5202-01A 6 4 CDS-5'UTR Intra-chr q14.1 q14.1 Seq+ 72100 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPINA1-ANKS1A SERPINA1 chr14 94844686 - ANKS1A chr6 34977682 + Exonic hg19 LUAD TCGA-50-6673-01A 2 6 Out-of-frame Inter-chr q32.13 p21.31 72101 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPINA1-CCT5 SERPINA1 chr14 94843084 - CCT5 chr5 10250033 + Exonic hg19 LIHC TCGA-DD-A4NR-01A 2 24 3'UTR-5'UTR Inter-chr q32.13 p15.2 72102 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPINA1-CCT5 SERPINA1 chr14 94843084 - CCT5 chr5 10250033 + Exonic hg19 LIHC TCGA-EP-A3JL-01A 2 19 3'UTR-5'UTR Inter-chr q32.13 p15.2 72103 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPINA1-CD46 SERPINA1 chr14 94844713 - CD46 chr1 207940358 + Exonic hg19 LIHC TCGA-DD-A4NB-01A 2 1 3'UTR-CDS Inter-chr q32.13 q32.2 72104 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPINA1-CD46 SERPINA1 chr14 94844713 - CD46 chr1 207940358 + Exonic hg19 LIHC TCGA-DD-A4NN-01A 2 3 3'UTR-CDS Inter-chr q32.13 q32.2 72105 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPINA1-CD63 SERPINA1 chr14 94844713 - CD63 chr12 56123444 - Exonic hg19 LIHC TCGA-2V-A95S-01A 2 1 Out-of-frame Inter-chr q32.13 q13.2 72106 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPINA1-CD63 SERPINA1 chr14 94844713 - CD63 chr12 56123444 - Exonic hg19 LIHC TCGA-RC-A6M6-01A 10 1 Out-of-frame Inter-chr q32.13 q13.2 72107 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPINA1-CPD SERPINA1 chr14 94844713 - CPD chr17 28783274 + Exonic hg19 LIHC TCGA-DD-A3A4-01A 4 2 3'UTR-CDS Inter-chr q32.13 q11.2 Tumor suppressor gene 72108 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPINA1-CPD SERPINA1 chr14 94844713 - CPD chr17 28783274 + Exonic hg19 LIHC TCGA-ED-A459-01A 2 5 3'UTR-CDS Inter-chr q32.13 q11.2 Tumor suppressor gene 72109 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPINA1-FADS2 SERPINA1 chr14 94843084 - FADS2 chr11 61588853 + Exonic hg19 LIHC TCGA-CC-A3MC-01A 2 1 3'UTR-5'UTR Inter-chr q32.13 q12.2 72110 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPINA1-FADS2 SERPINA1 chr14 94844686 - FADS2 chr11 61588853 + Exonic hg19 LIHC TCGA-DD-AACK-01A 4 1 Out-of-frame Inter-chr q32.13 q12.2 72111 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPINA1-FOXP1 SERPINA1 chr14 94844686 - FOXP1 chr3 71007472 - Exonic hg19 LIHC TCGA-BC-A10U-01A 2 5 Out-of-frame Inter-chr q32.13 p13 Oncogene Tumor suppressor gene Transcription factor 72112 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPINA1-LGR4 SERPINA1 chr14 94844726 - LGR4 chr11 27494322 - Exonic hg19 LIHC TCGA-ED-A66Y-01A 2 1 Out-of-frame Inter-chr q32.13 p14.1 72113 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPINA1-METTL7A SERPINA1 chr14 94844726 - METTL7A chr12 51318534 + Exonic hg19 LIHC TCGA-DD-A4NO-01A 2 1 3'UTR-5'UTR Inter-chr q32.13 q13.12 72114 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPINA1-PEX1 SERPINA1 chr14 94843084 - PEX1 chr7 92146729 - Exonic hg19 LIHC TCGA-CC-5261-01A 2 3 3'UTR-CDS Inter-chr q32.13 q21.2 72115 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPINA1-RPL35 SERPINA1 chr14 94844786 - RPL35 chr9 127624240 - Exonic hg19 LIHC TCGA-DD-AACK-01A 2 1 3'UTR-5'UTR Inter-chr q32.13 q33.3 72116 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPINA1-TMCO1 SERPINA1 chr14 94844713 - TMCO1 chr1 165728821 - Exonic hg19 LIHC TCGA-DD-A4NR-01A 2 4 3'UTR-3'UTR Inter-chr q32.13 q24.1 72117 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPINA3-EIF2AK2 SERPINA3 chr14 95090389 - EIF2AK2 chr2 37342384 - Exonic hg19 LIHC TCGA-K7-A6G5-01A 2 121 Out-of-frame Inter-chr q32.13 p22.2 72118 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPINA3-LAP3 SERPINA3 chr14 95090392 - LAP3 chr4 17585225 + Exonic hg19 LIHC TCGA-HP-A5MZ-01A 2 1 Out-of-frame Inter-chr q32.13 p15.32 72119 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPINA3-RPL23 SERPINA3 chr14 95090983 - RPL23 chr17 37009988 - Exonic hg19 PRAD TCGA-HC-A6AO-01A 2 6 Out-of-frame Inter-chr q32.13 q12 72120 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPINB5-CDH19 SERPINB5 chr18 61151829 - CDH19 chr18 64178922 - Exonic hg19 LUAD TCGA-49-4490-01A 4 1 In-Frame Intra-chr q21.33 Tumor suppressor gene q22.1 72121 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPINC1-STAT6 SERPINC1 chr1 173872948 - STAT6 chr12 57496773 - Exonic hg19 LIHC TCGA-DD-A11C-01A 3 6 Out-of-frame Inter-chr q25.1 q13.3 Transcription factor 72122 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPIND1-MICALL1 SERPIND1 chr22 21140436 - MICALL1 chr22 38333087 + Exonic hg19 LIHC TCGA-2Y-A9HA-01A 36 37 Out-of-frame Intra-chr q11.21 q13.1 Seq+ 72123 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPINE2-FARSB SERPINE2 chr2 224849469 - FARSB chr2 223436741 - Exonic hg19 COAD TCGA-D5-5539-01A 98 81 Out-of-frame Intra-chr q36.1 q36.1 Seq+ 72124 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPING1-CCT5 SERPING1 chr11 57382320 - CCT5 chr5 10250033 + Exonic hg19 LIHC TCGA-FV-A3R2-01A 2 1 Out-of-frame Inter-chr q12.1 p15.2 72125 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPING1-CHD1 SERPING1 chr11 57382326 - CHD1 chr5 98219587 - Exonic hg19 SKCM TCGA-EE-A2MK-06A 2 2 Out-of-frame Inter-chr q12.1 q21.1 Tumor suppressor gene 72126 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPINH1-ZBTB44 SERPINH1 chr11 75273364 - ZBTB44 chr11 130131824 - Exonic hg19 STAD TCGA-CG-4477-01A 48 17 5'UTR-5'UTR Intra-chr q13.5 q24.3 Transcription factor Seq+ 72127 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SERPINI1-NAALADL2 SERPINI1 chr3 167453611 - NAALADL2 chr3 174814580 + Exonic hg19 BRCA TCGA-A8-A081-01A 3 7 5'UTR-CDS Intra-chr q26.1 q26.31 72128 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SESN1-AIM1 SESN1 chr6 109414998 - AIM1 chr6 106899569 + Exonic hg19 BRCA TCGA-E2-A155-01A 6 6 CDS-5'UTR Intra-chr q21 Seq+ 72129 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SESN1-ARMC2 SESN1 chr6 109414998 - ARMC2 chr6 109274236 + Exonic hg19 SARC TCGA-3B-A9HL-01A 5 8 In-Frame Intra-chr q21 q21 72130 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SESN1-ECHDC1 SESN1 chr6 109414998 - ECHDC1 chr6 127611422 - Exonic hg19 LUAD TCGA-97-8174-01A 6 9 Out-of-frame Intra-chr q21 q22.33 Seq+ 72131 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SESN1-EYS SESN1 chr6 109414998 - EYS chr6 64498142 - Exonic hg19 LUSC TCGA-66-2759-01A 6 3 In-Frame Intra-chr q21 q12 Seq+ 72132 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SESN1-METTL1 SESN1 chr6 109313990 - METTL1 chr12 58165040 - Exonic hg19 SARC TCGA-FX-A3NK-01A 8 29 Out-of-frame Inter-chr q21 q14.1 Seq+ 72133 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SESTD1-ACMSD SESTD1 chr2 180129226 - ACMSD chr2 135655911 + Exonic hg19 BRCA TCGA-E2-A15S-01A 11 4 5'UTR-CDS Intra-chr q31.2 q21.3 Seq+ 72134 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SESTD1-FGGY SESTD1 chr2 180129226 - FGGY chr1 60073475 + Exonic hg19 SARC TCGA-DX-AB2O-01A 83 89 5'UTR-CDS Inter-chr q31.2 p32.1 Seq+ 72135 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SESTD1-POU1F1 SESTD1 chr2 180129226 - POU1F1 chr3 87313662 - Exonic hg19 SARC TCGA-DX-AB2O-01A 2 6 5'UTR-CDS Inter-chr q31.2 p11.2 Transcription factor 72136 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SESTD1-ZNF385B SESTD1 chr2 180129226 - ZNF385B chr2 180635399 - Exonic hg19 BRCA TCGA-EW-A3U0-01A 12 13 5'UTR-5'UTR Intra-chr q31.2 q31.3 Transcription factor Seq+ 72137 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETBP1-ARNTL SETBP1 chr18 42449248 - ARNTL chr11 13407236 + Exonic hg19 UCEC TCGA-AJ-A3QS-01A 20 8 In-Frame Inter-chr q12.3 Oncogene Transcription factor p15.3 Tumor suppressor gene Transcription factor 72138 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETBP1-NFYC SETBP1 chr18 42449248 - NFYC chr1 41204508 + Exonic hg19 BLCA TCGA-FD-A43Y-01A 18 4 CDS-5'UTR Inter-chr q12.3 Oncogene Transcription factor p34.2 Transcription factor Seq+ 72139 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETD1B-KDM2B SETD1B chr12 122248741 - KDM2B chr12 122013764 - Exonic hg19 GBM TCGA-06-5856-01A 25 81 Out-of-frame Intra-chr q24.31 q24.31 Transcription factor Seq+ 72140 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETD2-CCRL2 SETD2 chr3 47139445 - CCRL2 chr3 46449559 + Exonic hg19 SARC TCGA-LI-A9QH-01A 103 7 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Seq+ 72141 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETD2-KIF9 SETD2 chr3 47205344 - KIF9 chr3 47289576 - Exonic hg19 LUAD TCGA-86-8673-01A 5 5 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Seq+ 72142 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETD2-KIF9 SETD2 chr3 47205344 - KIF9 chr3 47289576 - Exonic hg19 UCS TCGA-N9-A4PZ-01A 3 5 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Seq+ 72143 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETD2-MACROD2 SETD2 chr3 47125210 - MACROD2 chr20 14066267 + Exonic hg19 MESO TCGA-SC-A6LM-01A 2 6 Out-of-frame Inter-chr p21.31 Oncogene Tumor suppressor gene p12.1 Seq+ 72144 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETD2-NISCH SETD2 chr3 47125210 - NISCH chr3 52504875 + Exonic hg19 MESO TCGA-ZN-A9VO-01A 10 8 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.1 Seq+ 72145 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETD2-PALMD SETD2 chr3 47205344 - PALMD chr1 100159575 + Exonic hg19 UCS TCGA-N9-A4PZ-01A 59 64 Out-of-frame Inter-chr p21.31 Oncogene Tumor suppressor gene p21.2 Seq+ 72146 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETD2-POGLUT1 SETD2 chr3 47139445 - POGLUT1 chr3 119207776 + Exonic hg19 LUAD TCGA-50-5044-01A 4 4 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene q13.33 Seq+ 72147 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETD2-QRICH1 SETD2 chr3 47205344 - QRICH1 chr3 49070661 - Exonic hg19 LUAD TCGA-55-A48Y-01A 23 30 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Seq+ 72148 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETD2-RBM6 SETD2 chr3 47205344 - RBM6 chr3 50112634 + Exonic hg19 SARC TCGA-FX-A48G-01A 439 654 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Tumor suppressor gene Seq+ 72149 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETD2-SCAP SETD2 chr3 47139445 - SCAP chr3 47484581 - Exonic hg19 STAD TCGA-BR-A4CR-01A 4 42 CDS-5'UTR Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Seq+ 72150 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETD2-SMARCC1 SETD2 chr3 47205344 - SMARCC1 chr3 47632327 - Exonic hg19 STAD TCGA-CG-4449-01A 5 3 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Tumor suppressor gene 72151 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETD2-SPATA12 SETD2 chr3 47155366 - SPATA12 chr3 57107394 + Exonic hg19 MESO TCGA-ZN-A9VW-01A 81 60 CDS-5'UTR Intra-chr p21.31 Oncogene Tumor suppressor gene p14.3 Seq+ 72152 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETD2-ULK4 SETD2 chr3 47155366 - ULK4 chr3 41504744 - Exonic hg19 BRCA TCGA-A2-A3XY-01A 7 4 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene p22.1 Other:ULK Seq+ 72153 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETD4-B4GALT6 SETD4 chr21 37412873 - B4GALT6 chr18 29246335 - Exonic hg19 LUSC TCGA-46-6025-01A 3 2 Out-of-frame Inter-chr q22.12 q12.1 Seq+ 72154 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETD4-FTCD SETD4 chr21 37432645 - FTCD chr21 47558837 - Exonic hg19 BRCA TCGA-C8-A275-01A 30 14 5'UTR-CDS Intra-chr q22.12 Seq+ 72155 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETD5-ATG7 SETD5 chr3 9506356 - ATG7 chr3 11596285 + Exonic hg19 BRCA TCGA-EW-A6SA-01A 82 17 In-Frame Intra-chr p25.3 p25.3 Seq+ 72156 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETD5-GADL1 SETD5 chr3 9439661 - GADL1 chr3 30898633 - Exonic hg19 PRAD TCGA-ZG-A8QZ-01A 27 38 5'UTR-CDS Intra-chr p25.3 p23 Seq+ 72157 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETD5-LMCD1 SETD5 chr3 9483929 - LMCD1 chr3 8574423 + Exonic hg19 BRCA TCGA-LL-A8F5-01A 12 14 In-Frame Intra-chr p25.3 p25.3 Seq+ 72158 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETD5-MCM7 SETD5 chr3 9439661 - MCM7 chr7 99696338 - Exonic hg19 PRAD TCGA-HC-7233-01A 8 5 5'UTR-CDS Inter-chr p25.3 q22.1 Seq+ 72159 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETD5-RAD18 SETD5 chr3 9490314 - RAD18 chr3 9005277 - Exonic hg19 BLCA TCGA-GU-AATP-01A 3 3 Out-of-frame Intra-chr p25.3 p25.3 Seq+ 72160 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETD5-RP11-15G16.1 SETD5 chr3 9439661 - RP11-15G16.1 chr8 41297356 + Exonic hg19 PRAD TCGA-CH-5751-01A 2 1 Out-of-frame Inter-chr p25.3 72161 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETD7-ACAD11 SETD7 chr4 140439039 - ACAD11 chr3 132363740 - Exonic hg19 SARC TCGA-DX-A3UA-01A 17 5 In-Frame Inter-chr q31.1 q22.1 Seq+ 72162 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETD7-NPY5R SETD7 chr4 140468074 - NPY5R chr4 164266866 + Exonic hg19 SKCM TCGA-W3-A825-06A 42 30 CDS-5'UTR Intra-chr q31.1 q32.2 Seq+ 72163 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETD8-RILPL2 SETD8 chr12 123880979 - RILPL2 chr12 123915206 - Exonic hg19 OV TCGA-24-1470-01A 14 15 In-Frame Intra-chr q24.31 Seq+ 72164 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETDB1-CD46 SETDB1 chr1 150923957 - CD46 chr1 207930359 + Exonic hg19 BRCA TCGA-OL-A5D8-01A 19 13 Out-of-frame Intra-chr q21.3 Transcription factor q32.2 Seq+ 72165 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETDB1-PKP4 SETDB1 chr1 150915164 - PKP4 chr2 159477502 + Exonic hg19 BRCA TCGA-E2-A1LK-01A 6 3 In-Frame Inter-chr q21.3 Transcription factor q24.1 Seq+ 72166 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETDB1-PLEKHO1 SETDB1 chr1 150902594 - PLEKHO1 chr1 150128260 + Exonic hg19 LUAD TCGA-86-8672-01A 3 1 Out-of-frame Intra-chr q21.3 Transcription factor q21.2 Tumor suppressor gene Seq+ 72167 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETDB2-AATF SETDB2 chr13 50018993 - AATF chr17 35413901 + Exonic hg19 SARC TCGA-IE-A3OV-01A 9 3 5'UTR-CDS Inter-chr q14.2 Transcription factor Seq+ 72168 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETDB2-CAB39L SETDB2 chr13 50062766 - CAB39L chr13 49957077 - Exonic hg19 BLCA TCGA-GU-A42Q-01A 2 1 CDS-5'UTR Intra-chr q14.2 Transcription factor q14.2 72169 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETDB2-ERH SETDB2 chr13 50042096 - ERH chr14 69847357 - Exonic hg19 BRCA TCGA-BH-A0EE-01A 286 161 In-Frame Inter-chr q14.2 Transcription factor q24.1 Seq+ 72170 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETMAR-EYS SETMAR chr3 4345210 - EYS chr6 66115260 - Exonic hg19 LUSC TCGA-98-A53I-01A 4 2 Out-of-frame Inter-chr p26.1 q12 Seq+ 72171 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETX-RAB14 SETX chr9 135230304 - RAB14 chr9 123955697 - Exonic hg19 ACC TCGA-OR-A5JE-01A 11 9 5'UTR-5'UTR Intra-chr q34.13 q33.2 Seq+ 72172 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SETX-TTF1 SETX chr9 135224639 - TTF1 chr9 135262008 - Exonic hg19 HNSC TCGA-CV-7238-01A 2 1 Out-of-frame Intra-chr q34.13 q34.13 Tumor suppressor gene Transcription factor 72173 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SF1-EHD1 SF1 chr11 64543970 - EHD1 chr11 64627808 - Exonic hg19 LUSC TCGA-43-A56U-01A 13 7 In-Frame Intra-chr q13.1 q13.1 Seq+ 72174 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SF1-HRASLS2 SF1 chr11 64534372 - HRASLS2 chr11 63326132 - Exonic hg19 HNSC TCGA-BB-8596-01A 119 45 In-Frame Intra-chr q13.1 q12.3 Tumor suppressor gene Seq+ 72175 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SF1-ITPR1 SF1 chr11 64543970 - ITPR1 chr3 4669447 + Exonic hg19 BRCA TCGA-BH-A0C0-01A 6 8 In-Frame Inter-chr q13.1 p26.1 Seq+ 72176 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SF1-SYT7 SF1 chr11 64545834 - SYT7 chr11 61300596 - Exonic hg19 LUAD TCGA-53-A4EZ-01A 47 17 Out-of-frame Intra-chr q13.1 q12.2 Seq+ 72177 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SF3A2-AZU1 SF3A2 chr19 2243543 - AZU1 chr19 828230 + Exonic hg19 PRAD TCGA-KK-A8ID-01A 175 45 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 72178 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SF3A3-HPCAL4 SF3A3 chr1 38425792 - HPCAL4 chr1 40150283 - Exonic hg19 UCS TCGA-NF-A4WX-01A 15 11 CDS-5'UTR Intra-chr p34.3 p34.2 Seq+ 72179 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SF3B1-HSPD1 SF3B1 chr2 198274494 - HSPD1 chr2 198355020 - Exonic hg19 BLCA TCGA-FJ-A3ZF-01A 5 14 Out-of-frame Intra-chr q33.1 Oncogene q33.1 Tumor suppressor gene Seq+ 72180 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SF3B2-SART1 SF3B2 chr11 65820575 - SART1 chr11 65734730 + Exonic hg19 BRCA TCGA-GM-A2DO-01A 27 21 In-Frame Intra-chr q13.1 q13.1 Seq+ 72181 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SF3B3-ADAM12 SF3B3 chr16 70604052 - ADAM12 chr10 127967557 - Exonic hg19 TGCT TCGA-2G-AAFI-01A 12 15 In-Frame Inter-chr q22.1 q26.2 Seq+ 72182 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SF3B3-CDH15 SF3B3 chr16 70578436 - CDH15 chr16 89245824 + Exonic hg19 LUAD TCGA-44-7667-01A 123 147 In-Frame Intra-chr q22.1 q24.3 Seq+ 72183 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SF3B3-COG4 SF3B3 chr16 70569323 - COG4 chr16 70543924 - Exonic hg19 BRCA TCGA-AQ-A54N-01A 43 39 In-Frame Intra-chr q22.1 q22.1 Seq+ 72184 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SF3B3-DDX19B SF3B3 chr16 70595687 - DDX19B chr16 70358488 + Exonic hg19 GBM TCGA-26-5133-01A 3 7 In-Frame Intra-chr q22.1 q22.1 Seq+ 72185 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SF3B3-DDX19B SF3B3 chr16 70573110 - DDX19B chr16 70346512 + Exonic hg19 BLCA TCGA-G2-A2ES-01A 5 6 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 72186 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SF3B3-DDX19B SF3B3 chr16 70573110 - DDX19B chr16 70346512 + Exonic hg19 ESCA TCGA-L5-A4OQ-01A 2 13 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 72187 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFI1-EFCAB4B SFI1 chr22 31985563 - EFCAB4B chr12 3753806 - Exonic hg19 TGCT TCGA-VF-A8AD-01A 3 6 In-Frame Inter-chr q12.2 72188 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFI1-LIMK2 SFI1 chr22 31904362 - LIMK2 chr22 31654277 + Exonic hg19 LGG TCGA-CS-6666-01A 15 4 In-Frame Intra-chr q12.2 q12.2 TKL:LISK Seq+ 72189 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFI1-OSBP2 SFI1 chr22 31904362 - OSBP2 chr22 31266416 + Exonic hg19 COAD TCGA-DM-A1D7-01A 5 5 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 72190 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFMBT1-ABHD5 SFMBT1 chr3 53052102 - ABHD5 chr3 43743707 + Exonic hg19 KIRC TCGA-CZ-4861-01A 21 14 5'UTR-CDS Intra-chr p21.1 p21.33 Seq+ 72191 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFMBT1-EML1 SFMBT1 chr3 52988333 - EML1 chr14 100357536 + Exonic hg19 UCEC TCGA-A5-A7WK-01A 9 9 Out-of-frame Inter-chr p21.1 q32.2 Seq+ 72192 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFMBT1-PTPRG SFMBT1 chr3 53079832 - PTPRG chr3 61975299 + Exonic hg19 SKCM TCGA-ER-A19M-06A 6 6 5'UTR-CDS Intra-chr p21.1 p14.2 Seq+ 72193 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFMBT1-RFT1 SFMBT1 chr3 53077152 - RFT1 chr3 53160010 - Exonic hg19 BRCA TCGA-A2-A4S3-01A 4 1 5'UTR-CDS Intra-chr p21.1 p21.1 Seq+ 72194 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFMBT1-RFT1 SFMBT1 chr3 53080476 - RFT1 chr3 53140885 - Exonic hg19 BRCA TCGA-A8-A07L-01A 45 25 5'UTR-CDS Intra-chr p21.1 p21.1 Seq+ 72195 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFMBT1-RFT1 SFMBT1 chr3 52977369 - RFT1 chr3 53133502 - Exonic hg19 LIHC TCGA-XR-A8TG-01A 8 18 In-Frame Intra-chr p21.1 p21.1 Seq+ 72196 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFMBT1-TKT SFMBT1 chr3 53079832 - TKT chr3 53276258 - Exonic hg19 STAD TCGA-R5-A7ZE-01B 7 31 5'UTR-CDS Intra-chr p21.1 p21.1 Tumor suppressor gene Seq+ 72197 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFMBT1-WNT7A SFMBT1 chr3 53003117 - WNT7A chr3 13916670 - Exonic hg19 LUAD TCGA-38-4630-01A 36 19 Out-of-frame Intra-chr p21.1 p25.1 Tumor suppressor gene Seq+ 72198 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFMBT1-ZDHHC3 SFMBT1 chr3 53079832 - ZDHHC3 chr3 45000952 - Exonic hg19 MESO TCGA-ZN-A9VU-01A 20 11 5'UTR-5'UTR Intra-chr p21.1 Seq+ 72199 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFMBT2-TGM2 SFMBT2 chr10 7409611 - TGM2 chr20 36790001 - Exonic hg19 LGG TCGA-DU-5871-01A 7 2 In-Frame Inter-chr p14 q11.23 Seq+ 72200 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFN-CCT5 SFN chr1 27190947 - CCT5 chr5 10250033 + Exonic hg19 CESC TCGA-JW-A5VL-01A 2 13 Out-of-frame Inter-chr p36.11 Tumor suppressor gene p15.2 72201 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFN-CLASP1 SFN chr1 27190947 - CLASP1 chr2 122217701 - Exonic hg19 CESC TCGA-C5-A1M8-01A 2 1 3'UTR-CDS Inter-chr p36.11 Tumor suppressor gene q14.3 72202 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFN-ELK3 SFN chr1 27190947 - ELK3 chr12 96588323 + Exonic hg19 HNSC TCGA-D6-6517-01A 2 26 Out-of-frame Inter-chr p36.11 Tumor suppressor gene q23.1 Transcription factor 72203 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFN-ELK3 SFN chr1 27190947 - ELK3 chr12 96588323 + Exonic hg19 HNSC TCGA-F7-A623-01A 2 56 Out-of-frame Inter-chr p36.11 Tumor suppressor gene q23.1 Transcription factor 72204 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFN-HDLBP SFN chr1 27190947 - HDLBP chr2 242194995 - Exonic hg19 HNSC TCGA-CV-A6JM-01A 2 1 3'UTR-CDS Inter-chr p36.11 Tumor suppressor gene q37.3 72205 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFN-PLAT SFN chr1 27190947 - PLAT chr8 42051245 - Exonic hg19 CESC TCGA-VS-A958-01A 2 14 Out-of-frame Inter-chr p36.11 Tumor suppressor gene p11.21 72206 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFN-TYK2 SFN chr1 27190947 - TYK2 chr19 10491352 - Exonic hg19 HNSC TCGA-BA-6872-01A 2 2 Out-of-frame Inter-chr p36.11 Tumor suppressor gene p13.2 TK:JakA 72207 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFPQ-TFE3 SFPQ chr1 35654604 - TFE3 chrX 48898095 - Exonic hg19 KIRC TCGA-AK-3456-01A 105 118 In-Frame Inter-chr p34.3 p11.23 Oncogene Transcription factor KB Pub Seq+ 72208 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFPQ-TFE3 SFPQ chr1 35652602 - TFE3 chrX 48891766 - Exonic hg19 KIRC TCGA-B0-5705-01A 3 2 In-Frame Inter-chr p34.3 p11.23 Oncogene Transcription factor KB Pub Seq+ 72209 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFPQ-TFE3 SFPQ chr1 35652602 - TFE3 chrX 48891766 - Exonic hg19 KIRC TCGA-B8-5546-01A 172 143 In-Frame Inter-chr p34.3 p11.23 Oncogene Transcription factor KB Pub Seq+ 72210 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFPQ-TFE3 SFPQ chr1 35654604 - TFE3 chrX 48898095 - Exonic hg19 KIRC TCGA-BP-4756-01A 333 292 In-Frame Inter-chr p34.3 p11.23 Oncogene Transcription factor KB Pub Seq+ 72211 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFPQ-TFE3 SFPQ chr1 35654604 - TFE3 chrX 48898095 - Exonic hg19 KIRC TCGA-BP-4758-01A 4 5 In-Frame Inter-chr p34.3 p11.23 Oncogene Transcription factor KB Pub Seq+ 72212 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFPQ-TFE3 SFPQ chr1 35654604 - TFE3 chrX 48898095 - Exonic hg19 KIRP TCGA-G7-7501-01A 222 185 In-Frame Inter-chr p34.3 p11.23 Oncogene Transcription factor KB Pub Seq+ 72213 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFPQ-TFE3 SFPQ chr1 35654604 - TFE3 chrX 48898095 - Exonic hg19 KIRP TCGA-SX-A7SO-01A 104 103 In-Frame Inter-chr p34.3 p11.23 Oncogene Transcription factor KB Pub Seq+ 72214 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFRP1-ARMC5 SFRP1 chr8 41160980 - ARMC5 chr16 31473243 + Exonic hg19 BRCA TCGA-AR-A1AN-01A 8 9 In-Frame Inter-chr p11.21 Tumor suppressor gene p11.2 Tumor suppressor gene Seq+ 72215 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFSWAP-MYO1H SFSWAP chr12 132250853 - MYO1H chr12 109845599 + Exonic hg19 LGG TCGA-HW-A5KL-01A 4 2 In-Frame Intra-chr q24.33 q24.11 Seq+ 72216 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFT2D1-FAM46A SFT2D1 chr6 166755907 - FAM46A chr6 82204830 - Exonic hg19 UVM TCGA-VD-A8KJ-01A 189 539 CDS-3'UTR Intra-chr q27 q14.1 Seq+ 72217 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFT2D2-C1orf9 SFT2D2 chr1 168208398 - C1orf9 chr1 172520652 + Exonic hg19 LUSC TCGA-43-2576-01A 172 222 In-Frame Intra-chr q24.2 Seq+ 72218 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFT2D2-GPR161 SFT2D2 chr1 168195380 - GPR161 chr1 168074132 - Exonic hg19 SARC TCGA-DX-A6BG-01A 7 4 CDS-5'UTR Intra-chr q24.2 q24.2 Seq+ 72219 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFTPB-SLC35C1 SFTPB chr2 85885766 - SLC35C1 chr11 45832327 + Exonic hg19 LUAD TCGA-80-5608-01A 3 1 3'UTR-CDS Inter-chr p11.2 p11.2 72220 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFTPC-CHD1 SFTPC chr8 22021989 - CHD1 chr5 98219587 - Exonic hg19 LUAD TCGA-55-6971-01A 2 5 Out-of-frame Inter-chr p21.3 q21.1 Tumor suppressor gene 72221 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFTPC-SUPT16H SFTPC chr8 22021989 - SUPT16H chr14 21829491 - Exonic hg19 LUAD TCGA-44-7670-01A 2 7 Out-of-frame Inter-chr p21.3 q11.2 72222 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFTPC-ZNFX1 SFTPC chr8 22021989 - ZNFX1 chr20 47863418 - Exonic hg19 LUAD TCGA-44-2657-01A 2 3 Out-of-frame Inter-chr p21.3 q13.13 72223 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFXN5-RAB11FIP5 SFXN5 chr2 73298733 - RAB11FIP5 chr2 73316443 - Exonic hg19 UCS TCGA-N8-A4PP-01A 4 1 Out-of-frame Intra-chr p13.2 p13.2 72224 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFXN5-RAB11FIP5 SFXN5 chr2 73298733 - RAB11FIP5 chr2 73303310 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 2 1 Out-of-frame Intra-chr p13.2 p13.2 72225 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SFXN5-SLC8A1 SFXN5 chr2 73247368 - SLC8A1 chr2 40404995 - Exonic hg19 LIHC TCGA-4R-AA8I-01A 7 2 Out-of-frame Intra-chr p13.2 p22.1 Seq+ 72226 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SGCB-SPATA18 SGCB chr4 52899597 - SPATA18 chr4 52926585 + Exonic hg19 LUSC TCGA-66-2787-01A 4 2 In-Frame Intra-chr q12 q12 Seq+ 72227 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SGCB-TXLNA SGCB chr4 52904393 - TXLNA chr1 32655656 + Exonic hg19 LGG TCGA-FG-5965-02A 2 8 In-Frame Inter-chr q12 p35.2 Seq+ 72228 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SGCD-LCP2 SGCD chr5 155771687 - LCP2 chr5 169720376 - Exonic hg19 HNSC TCGA-CQ-6221-01A 8 3 In-Frame Intra-chr q33.2 q35.1 Seq+ 72229 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SGK3-ANKS1A SGK3 chr8 67774257 - ANKS1A chr6 34977682 + Exonic hg19 HNSC TCGA-DQ-7590-01A 2 1 Out-of-frame Inter-chr q13.1 AGC:SGK p21.31 72230 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SGK3-DNAJC5B SGK3 chr8 67710860 - DNAJC5B chr8 66992612 + Exonic hg19 OV TCGA-24-1548-01A 5 2 In-Frame Intra-chr q13.1 AGC:SGK q13.1 Seq+ 72231 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SGK3-KRT9 SGK3 chr8 67743546 - KRT9 chr17 39726472 - Exonic hg19 LUAD TCGA-55-7907-01A 22 5 In-Frame Inter-chr q13.1 AGC:SGK q21.2 72232 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SGK3-NCK1 SGK3 chr8 67755782 - NCK1 chr3 136667101 + Exonic hg19 SKCM TCGA-D3-A3BZ-06A 18 20 In-Frame Inter-chr q13.1 AGC:SGK q22.3 Seq+ 72233 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SGK3-TRIM55 SGK3 chr8 67602995 - TRIM55 chr8 67047225 + Exonic hg19 BRCA TCGA-E9-A228-01A 5 3 5'UTR-CDS Intra-chr q13.1 AGC:SGK q13.1 72234 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SGMS1-GAB2 SGMS1 chr10 52086965 - GAB2 chr11 77991947 - Exonic hg19 LUAD TCGA-64-1681-01A 7 3 In-Frame Inter-chr q11.23 Tumor suppressor gene q14.1 Seq+ 72235 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SGMS1-GRID1 SGMS1 chr10 52226650 - GRID1 chr10 87675996 - Exonic hg19 HNSC TCGA-BA-6868-01B 15 11 5'UTR-CDS Intra-chr q11.23 Tumor suppressor gene q23.2 Seq+ 72236 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SGMS1-VSTM4 SGMS1 chr10 52193236 - VSTM4 chr10 50227820 - Exonic hg19 PRAD TCGA-VP-A87B-01A 11 10 5'UTR-CDS Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 72237 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SGOL2-FBXO8 SGOL2 chr2 201390975 - FBXO8 chr4 175184251 - Exonic hg19 PRAD TCGA-YL-A8SC-01A 3 2 5'UTR-5'UTR Inter-chr q34.1 72238 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SGPL1-ADAMTS14 SGPL1 chr10 72576636 - ADAMTS14 chr10 72489050 + Exonic hg19 STAD TCGA-VQ-A91K-01A 2 6 In-Frame Intra-chr q22.1 q22.1 Seq+ 72239 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SGPL1-BTBD9 SGPL1 chr10 72576636 - BTBD9 chr6 38160373 - Exonic hg19 PRAD TCGA-VP-A87K-01A 4 1 Out-of-frame Inter-chr q22.1 p21.2 Seq+ 72240 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SGPP1-NAA30 SGPP1 chr14 64193979 - NAA30 chr14 57863470 + Exonic hg19 LGG TCGA-S9-A6WM-01A 4 1 In-Frame Intra-chr q23.2 q22.3 72241 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SGPP2-ABCA12 SGPP2 chr2 223289540 - ABCA12 chr2 215882856 - Exonic hg19 ESCA TCGA-VR-A8EU-01A 2 4 Out-of-frame Intra-chr q36.1 q35 72242 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SGPP2-AC040980.1 SGPP2 chr2 223289540 - AC040980.1 chr17 73982268 + Exonic hg19 UCEC TCGA-AJ-A3I9-01A 6 22 Out-of-frame Inter-chr q36.1 72243 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SGPP2-ALG14 SGPP2 chr2 223389752 - ALG14 chr1 95492816 - Exonic hg19 BRCA TCGA-B6-A0RE-01A 22 20 In-Frame Inter-chr q36.1 p21.3 Seq+ 72244 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SGSM1-GAL3ST1 SGSM1 chr22 25255807 - GAL3ST1 chr22 30953388 - Exonic hg19 SARC TCGA-3B-A9HO-01A 2 8 CDS-5'UTR Intra-chr q11.23 q12.2 Seq+ 72245 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SGSM2-EPN2 SGSM2 chr17 2246914 - EPN2 chr17 19213198 + Exonic hg19 BLCA TCGA-FD-A3SQ-01A 46 22 In-Frame Intra-chr p13.3 Transcription factor p11.2 Seq+ 72246 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SGSM2-SRR SGSM2 chr17 2246914 - SRR chr17 2224600 + Exonic hg19 CESC TCGA-HM-A6W2-01A 2 2 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 72247 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SGSM3-DEFB126 SGSM3 chr22 40766692 - DEFB126 chr20 126056 + Exonic hg19 SKCM TCGA-GN-A8LN-01A 18 16 5'UTR-CDS Inter-chr q13.1 p13 Seq+ 72248 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SGSM3-PPP6R2 SGSM3 chr22 40766692 - PPP6R2 chr22 50870694 + Exonic hg19 SARC TCGA-DX-A8BR-01A 7 4 5'UTR-CDS Intra-chr q13.1 q13.33 Seq+ 72249 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SGSM3-TNRC6B SGSM3 chr22 40804846 - TNRC6B chr22 40696459 + Exonic hg19 LUAD TCGA-55-8506-01A 16 13 In-Frame Intra-chr q13.1 q13.1 Seq+ 72250 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SGTA-INSL3 SGTA chr19 2762504 - INSL3 chr19 17927868 - Exonic hg19 BRCA TCGA-AC-A8OP-01A 91 43 Out-of-frame Intra-chr p13.3 p13.11 Seq+ 72251 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH2B3-ATXN2 SH2B3 chr12 111844081 - ATXN2 chr12 111993723 - Exonic hg19 SARC TCGA-DX-A3U5-01A 6 5 5'UTR-CDS Intra-chr q24.12 Tumor suppressor gene q24.12 72252 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH2B3-CUX2 SH2B3 chr12 111844081 - CUX2 chr12 111757816 + Exonic hg19 BRCA TCGA-BH-A18V-06A 3 8 5'UTR-CDS Intra-chr q24.12 Tumor suppressor gene q24.11 Transcription factor Seq+ 72253 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH2D3A-GPM6A SH2D3A chr19 6767398 - GPM6A chr4 176573138 - Exonic hg19 HNSC TCGA-CQ-A4CI-01A 21 16 5'UTR-CDS Inter-chr p13.3 q34.2 Seq+ 72254 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH2D4A-AP3M2 SH2D4A chr8 19171590 - AP3M2 chr8 42015459 + Exonic hg19 PRAD TCGA-V1-A9Z8-01A 2 6 5'UTR-CDS Intra-chr p21.3 p11.21 Seq+ 72255 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH2D6-NCOA2 SH2D6 chr2 85649813 - NCOA2 chr8 71082614 - Exonic hg19 BLCA TCGA-GD-A3OS-01A 20 21 5'UTR-CDS Inter-chr p11.2 q13.3 Oncogene Transcription factor Seq+ 72256 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3BGRL-CBS SH3BGRL chrX 80554046 - CBS chr21 44476011 - Exonic hg19 SARC TCGA-DX-A6BA-01A 2 19 Out-of-frame Inter-chr q21.1 q22.3 72257 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3BGRL2-HMGCLL1 SH3BGRL2 chr6 80341223 - HMGCLL1 chr6 55381401 - Exonic hg19 PRAD TCGA-EJ-7782-01A 26 12 In-Frame Intra-chr q14.1 p12.1 Seq+ 72258 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3BGRL3-FAR1 SH3BGRL3 chr1 26608007 - FAR1 chr11 13744912 + Exonic hg19 CESC TCGA-EX-A1H5-01A 2 2 Out-of-frame Inter-chr p36.11 p15.3 72259 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3BGRL3-GRINA SH3BGRL3 chr1 26608007 - GRINA chr8 145064226 + Exonic hg19 SKCM TCGA-EE-A2GL-06A 2 2 3'UTR-5'UTR Inter-chr p36.11 q24.3 72260 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3BP1-CACNA1I SH3BP1 chr22 38039795 - CACNA1I chr22 40057970 + Exonic hg19 HNSC TCGA-CV-6941-01A 5 7 In-Frame Intra-chr q13.1 q13.1 Seq+ 72261 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3BP4-LANCL1 SH3BP4 chr2 235904020 - LANCL1 chr2 211341136 - Exonic hg19 PAAD TCGA-L1-A7W4-01A 4 6 5'UTR-5'UTR Intra-chr q37.2 q34 Seq+ 72262 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3BP4-MST1R SH3BP4 chr2 235904020 - MST1R chr3 49936696 - Exonic hg19 CESC TCGA-DS-A7WH-01A 39 37 5'UTR-CDS Inter-chr q37.2 p21.31 Tumor suppressor gene Seq+ 72263 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3BP4-SNED1 SH3BP4 chr2 235860814 - SNED1 chr2 241973152 + Exonic hg19 COAD TCGA-A6-2684-01A 2 3 5'UTR-CDS Intra-chr q37.2 q37.3 Seq+ 72264 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3BP5-HEATR6 SH3BP5 chr3 15372011 - HEATR6 chr17 58123590 - Exonic hg19 BRCA TCGA-A7-A26H-01A 2 4 In-Frame Inter-chr p25.1 q23.1 72265 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3BP5-METTL6 SH3BP5 chr3 15372011 - METTL6 chr3 15425694 - Exonic hg19 OV TCGA-25-2397-01A 22 49 CDS-3'UTR Intra-chr p25.1 p25.1 Seq+ 72266 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3BP5-METTL6 SH3BP5 chr3 15345610 - METTL6 chr3 15425694 - Exonic hg19 BRCA TCGA-C8-A134-01A 36 37 CDS-3'UTR Intra-chr p25.1 p25.1 Seq+ 72267 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3D19-INPP4B SH3D19 chr4 152147199 - INPP4B chr4 143352538 - Exonic hg19 SKCM TCGA-FS-A1ZD-06A 8 12 5'UTR-5'UTR Intra-chr q31.3 q31.21 Tumor suppressor gene Seq+ 72268 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3D19-LAMTOR3 SH3D19 chr4 152147199 - LAMTOR3 chr4 100806832 - Exonic hg19 MESO TCGA-MQ-A6BN-01A 4 1 5'UTR-CDS Intra-chr q31.3 q23 72269 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3D21-EIF2C3 SH3D21 chr1 36775191 - EIF2C3 chr1 36448222 + Exonic hg19 STAD TCGA-BR-4366-01A 2 4 Out-of-frame Intra-chr p34.3 72270 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3D21-PCGF3 SH3D21 chr1 36775191 - PCGF3 chr4 724419 + Exonic hg19 STAD TCGA-BR-4369-01A 9 13 CDS-5'UTR Inter-chr p34.3 p16.3 Seq+ 72271 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3D21-THRAP3 SH3D21 chr1 36773426 - THRAP3 chr1 36748134 + Exonic hg19 LUSC TCGA-58-8386-01A 6 2 CDS-5'UTR Intra-chr p34.3 p34.3 72272 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3GL1-ANKRD24 SH3GL1 chr19 4400321 - ANKRD24 chr19 4219588 + Exonic hg19 BRCA TCGA-GM-A2DC-01A 11 25 In-Frame Intra-chr p13.3 p13.3 Seq+ 72273 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3GL1-DPP9 SH3GL1 chr19 4400321 - DPP9 chr19 4679958 - Exonic hg19 LIHC TCGA-NI-A8LF-01A 3 3 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 72274 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3GL1-FN1 SH3GL1 chr19 4361313 - FN1 chr2 216300790 - Exonic hg19 KICH TCGA-KN-8427-01A 3 1 Out-of-frame Inter-chr p13.3 q35 Oncogene 72275 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3GL1-MUM1 SH3GL1 chr19 4400321 - MUM1 chr19 1356323 + Exonic hg19 BRCA TCGA-AN-A04A-01A 2 4 CDS-5'UTR Intra-chr p13.3 p13.3 Tumor suppressor gene Seq+ 72276 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3GL1-TAX1BP1 SH3GL1 chr19 4400321 - TAX1BP1 chr7 27867357 + Exonic hg19 BRCA TCGA-A8-A07W-01A 12 31 In-Frame Inter-chr p13.3 p15.2 Seq+ 72277 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3GLB2-CACNA1A SH3GLB2 chr9 131790371 - CACNA1A chr19 13414698 - Exonic hg19 UCEC TCGA-PG-A7D5-01A 2 3 In-Frame Inter-chr q34.11 p13.13 Seq+ 72278 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3KBP1-MAP7D2 SH3KBP1 chrX 19854243 - MAP7D2 chrX 20026516 - Exonic hg19 BRCA TCGA-A7-A26G-01A 10 1 CDS-3'UTR Intra-chr p22.12 p22.12 Seq+ 72279 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3KBP1-VSIG1 SH3KBP1 chrX 19854243 - VSIG1 chrX 107301268 + Exonic hg19 SKCM TCGA-EE-A2MS-06A 23 28 Out-of-frame Intra-chr p22.12 q22.3 Seq+ 72280 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3PXD2A-MAP1S SH3PXD2A chr10 105452786 - MAP1S chr19 17845082 + Exonic hg19 UCEC TCGA-A5-A2K4-01A 17 4 Out-of-frame Inter-chr q24.33 p13.11 Seq+ 72281 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105614953 - OBFC1 chr10 105670380 - Exonic hg19 LUSC TCGA-18-3415-01A 77 43 Out-of-frame Intra-chr q24.33 Seq+ 72282 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105561040 - OBFC1 chr10 105664914 - Exonic hg19 LUAD TCGA-44-7660-01A 8 6 Out-of-frame Intra-chr q24.33 Seq+ 72283 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105614953 - OBFC1 chr10 105659981 - Exonic hg19 HNSC TCGA-CV-5976-01A 4 2 Out-of-frame Intra-chr q24.33 Seq+ 72284 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105495490 - OBFC1 chr10 105648902 - Exonic hg19 BRCA TCGA-D8-A1JM-01A 89 67 In-Frame Intra-chr q24.33 Seq+ 72285 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105614953 - OBFC1 chr10 105642599 - Exonic hg19 HNSC TCGA-DQ-5630-01A 64 41 Out-of-frame Intra-chr q24.33 Seq+ 72286 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105614953 - OBFC1 chr10 105670380 - Exonic hg19 BLCA TCGA-E7-A5KE-01A 5 3 Out-of-frame Intra-chr q24.33 Seq+ 72287 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105614953 - OBFC1 chr10 105677414 - Exonic hg19 CESC TCGA-EK-A2PG-01A 11 2 CDS-5'UTR Intra-chr q24.33 Seq+ 72288 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105561040 - OBFC1 chr10 105677414 - Exonic hg19 ESCA TCGA-JY-A6FH-01A 8 42 CDS-5'UTR Intra-chr q24.33 Seq+ 72289 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105561040 - OBFC1 chr10 105652010 - Exonic hg19 ESCA TCGA-L5-A88Y-01A 8 29 In-Frame Intra-chr q24.33 Seq+ 72290 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105614953 - OBFC1 chr10 105670380 - Exonic hg19 BLCA TCGA-UY-A9PB-01A 44 35 Out-of-frame Intra-chr q24.33 Seq+ 72291 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3PXD2A-OBFC1 SH3PXD2A chr10 105365555 - OBFC1 chr10 105670380 - Exonic hg19 STAD TCGA-VQ-A925-01A 4 31 Out-of-frame Intra-chr q24.33 Seq+ 72292 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3PXD2A-PDLIM1 SH3PXD2A chr10 105561040 - PDLIM1 chr10 97031541 - Exonic hg19 LUSC TCGA-96-A4JK-01A 54 31 In-Frame Intra-chr q24.33 q23.33 Seq+ 72293 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3PXD2A-RB1 SH3PXD2A chr10 105371338 - RB1 chr13 49039134 + Exonic hg19 OV TCGA-24-1469-01A 29 5 In-Frame Inter-chr q24.33 q14.2 Oncogene Tumor suppressor gene Seq+ 72294 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3RF1-NEK1 SH3RF1 chr4 170037420 - NEK1 chr4 170327898 - Exonic hg19 KIRP TCGA-G7-6793-01A 5 6 In-Frame Intra-chr q33 q33 Other:NEK Seq+ 72295 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3RF1-SPOCK3 SH3RF1 chr4 170057469 - SPOCK3 chr4 167810395 - Exonic hg19 COAD TCGA-AZ-6607-01A 15 2 In-Frame Intra-chr q33 q32.3 Seq+ 72296 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3RF2-MDM1 SH3RF2 chr5 145317869 - MDM1 chr12 68725001 - Exonic hg19 SARC TCGA-DX-A3LY-01B 2 3 In-Frame Inter-chr q32 q15 72297 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3RF2-SLC23A1 SH3RF2 chr5 145317869 - SLC23A1 chr5 138707942 - Exonic hg19 LUSC TCGA-85-A4QQ-01A 2 1 Out-of-frame Intra-chr q32 q31.2 72298 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SH3YL1-MTHFD1L SH3YL1 chr2 229966 - MTHFD1L chr6 151243341 + Exonic hg19 SARC TCGA-X2-A95T-01A 10 4 Out-of-frame Inter-chr p25.3 q25.1 Seq+ 72299 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHANK1-MTHFD1L SHANK1 chr19 51175275 - MTHFD1L chr6 151330955 + Exonic hg19 BRCA TCGA-A8-A08I-01A 7 6 In-Frame Inter-chr q13.33 q25.1 72300 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHANK2-ANO1 SHANK2 chr11 70331419 - ANO1 chr11 70003053 + Exonic hg19 BLCA TCGA-XF-AAMQ-01A 4 10 In-Frame Intra-chr q13.4 q13.3 Seq+ 72301 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHANK2-ANXA13 SHANK2 chr11 70935743 - ANXA13 chr8 124724993 - Exonic hg19 BRCA TCGA-B6-A0RS-01A 76 79 5'UTR-CDS Inter-chr q13.4 q24.13 Seq+ 72302 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHANK2-ARHGEF17 SHANK2 chr11 70544793 - ARHGEF17 chr11 73057928 + Exonic hg19 BRCA TCGA-EW-A2FS-01A 6 5 In-Frame Intra-chr q13.4 q13.4 Seq+ 72303 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHANK2-C11orf49 SHANK2 chr11 70644548 - C11orf49 chr11 47008759 + Exonic hg19 LUSC TCGA-43-6771-01A 4 7 Out-of-frame Intra-chr q13.4 p11.2 Seq+ 72304 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHANK2-CPT1A SHANK2 chr11 70935743 - CPT1A chr11 68582955 - Exonic hg19 BRCA TCGA-A8-A07W-01A 32 33 5'UTR-5'UTR Intra-chr q13.4 q13.3 Seq+ 72305 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHANK2-EFCAB6 SHANK2 chr11 70505933 - EFCAB6 chr22 43936237 - Exonic hg19 LUAD TCGA-86-8673-01A 3 7 In-Frame Inter-chr q13.4 q13.31 Seq+ 72306 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHANK2-ELP4 SHANK2 chr11 70505933 - ELP4 chr11 31804941 + Exonic hg19 BRCA TCGA-E2-A106-01A 54 37 In-Frame Intra-chr q13.4 p13 Seq+ 72307 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHANK2-ITPK1 SHANK2 chr11 70963471 - ITPK1 chr14 93542964 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 7 7 5'UTR-CDS Inter-chr q13.4 Seq+ 72308 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHANK2-LRTOMT SHANK2 chr11 70644548 - LRTOMT chr11 71804542 + Exonic hg19 BLCA TCGA-CF-A3MG-01A 15 17 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 72309 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHANK2-NEU3 SHANK2 chr11 70505933 - NEU3 chr11 74705554 + Exonic hg19 CHOL TCGA-W5-AA2X-01A 5 8 In-Frame Intra-chr q13.4 q13.4 Seq+ 72310 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHANK2-NUMA1 SHANK2 chr11 70963471 - NUMA1 chr11 71780957 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 4 1 5'UTR-5'UTR Intra-chr q13.4 q13.4 Oncogene 72311 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHANK2-OPCML SHANK2 chr11 70505933 - OPCML chr11 132399080 - Exonic hg19 BRCA TCGA-E2-A14N-01A 3 3 In-Frame Intra-chr q13.4 q25 Tumor suppressor gene Seq+ 72312 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHANK2-PATL1 SHANK2 chr11 70858166 - PATL1 chr11 59434437 - Exonic hg19 BRCA TCGA-C8-A27B-01A 7 2 In-Frame Intra-chr q13.4 q12.1 Seq+ 72313 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHANK2-RBM4B SHANK2 chr11 70544793 - RBM4B chr11 66433049 - Exonic hg19 BRCA TCGA-AC-A4ZE-01A 4 3 CDS-3'UTR Intra-chr q13.4 q13.2 Seq+ 72314 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHANK2-SYT7 SHANK2 chr11 70935743 - SYT7 chr11 61323679 - Exonic hg19 READ TCGA-DT-5265-01A 2 3 5'UTR-CDS Intra-chr q13.4 q12.2 Seq+ 72315 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHANK2-TACC1 SHANK2 chr11 70803468 - TACC1 chr8 38645075 + Exonic hg19 BRCA TCGA-AC-A2BM-01A 3 1 Out-of-frame Inter-chr q13.4 p11.22 72316 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHANK2-THRSP SHANK2 chr11 70505933 - THRSP chr11 77778705 + Exonic hg19 UCEC TCGA-A5-A1OH-01A 4 1 CDS-3'UTR Intra-chr q13.4 q14.1 72317 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHANK2-WNT11 SHANK2 chr11 70644548 - WNT11 chr11 75902900 - Exonic hg19 LUAD TCGA-78-7161-01A 6 6 Out-of-frame Intra-chr q13.4 q13.5 Tumor suppressor gene Seq+ 72318 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHANK3-MIOX SHANK3 chr22 51160865 - MIOX chr22 50925814 + Exonic hg19 SKCM TCGA-GN-A8LN-01A 4 1 Out-of-frame Intra-chr q13.33 Seq+ 72319 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHANK3-PLXNB2 SHANK3 chr22 51160865 - PLXNB2 chr22 50729026 - Exonic hg19 BRCA TCGA-E2-A1L7-01A 7 3 CDS-5'UTR Intra-chr q13.33 Seq+ 72320 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHB-AKR1CL1 SHB chr9 37955880 - AKR1CL1 chr10 5204983 - Exonic hg19 BRCA TCGA-D8-A1XT-01A 4 4 CDS-3'UTR Inter-chr p13.1 72321 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHB-CDKN2A SHB chr9 38067926 - CDKN2A chr9 21968241 - Exonic hg19 MESO TCGA-TS-A7P1-01A 55 42 Out-of-frame Intra-chr p13.1 p21.3 Oncogene Tumor suppressor gene Seq+ 72322 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHB-CPEB2 SHB chr9 38067926 - CPEB2 chr4 15060045 + Exonic hg19 BRCA TCGA-B6-A0I6-01A 3 3 Out-of-frame Inter-chr p13.1 72323 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHB-GRIN2A SHB chr9 37955880 - GRIN2A chr16 9943818 - Exonic hg19 LGG TCGA-CS-5397-01A 2 4 Out-of-frame Inter-chr p13.1 p13.2 Tumor suppressor gene Seq+ 72324 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHB-LINGO2 SHB chr9 38016008 - LINGO2 chr9 27950704 - Exonic hg19 GBM TCGA-06-0211-02A 3 4 CDS-5'UTR Intra-chr p13.1 p21.1 Seq+ 72325 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHB-LYN SHB chr9 37974619 - LYN chr8 56854414 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 35 CDS-5'UTR Inter-chr p13.1 q12.1 TK:Src Seq+ 72326 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHB-PALM2-AKAP2 SHB chr9 38067926 - PALM2-AKAP2 chr9 112629771 + Exonic hg19 BRCA TCGA-A8-A06Z-01A 2 2 Out-of-frame Intra-chr p13.1 q31.3 72327 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHB-PAX5 SHB chr9 38016008 - PAX5 chr9 37020798 - Exonic hg19 LUSC TCGA-22-4609-01A 18 54 In-Frame Intra-chr p13.1 p13.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 72328 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHB-SLC28A3 SHB chr9 38067926 - SLC28A3 chr9 86928369 - Exonic hg19 BRCA TCGA-JL-A3YW-01A 5 4 In-Frame Intra-chr p13.1 q21.33 Seq+ 72329 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHC1-ANAPC5 SHC1 chr1 154946724 - ANAPC5 chr12 121779872 - Exonic hg19 SKCM TCGA-QB-AA9O-06A 14 6 5'UTR-CDS Inter-chr q21.3 q24.31 Seq+ 72330 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHC1-ASH1L SHC1 chr1 154946724 - ASH1L chr1 155309159 - Exonic hg19 LUAD TCGA-55-7903-01A 27 6 5'UTR-CDS Intra-chr q21.3 q22 Transcription factor Seq+ 72331 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHC1-FOXP1 SHC1 chr1 154934774 - FOXP1 chr3 71007472 - Exonic hg19 LUAD TCGA-55-7574-01A 2 6 3'UTR-3'UTR Inter-chr q21.3 p13 Oncogene Tumor suppressor gene Transcription factor 72332 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHC1-RPRD2 SHC1 chr1 154946724 - RPRD2 chr1 150390072 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 10 6 5'UTR-CDS Intra-chr q21.3 q21.2 Seq+ 72333 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHC2-C19orf22 SHC2 chr19 430684 - C19orf22 chr19 902130 - Exonic hg19 LGG TCGA-FG-A4MY-01A 13 3 Out-of-frame Intra-chr p13.3 72334 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHC2-CREB3L3 SHC2 chr19 460529 - CREB3L3 chr19 4164500 + Exonic hg19 LUAD TCGA-44-8119-01A 4 2 In-Frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 72335 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHC2-PTEN SHC2 chr19 438718 - PTEN chr10 89685270 + Exonic hg19 SKCM TCGA-D3-A2JA-06A 2 3 Out-of-frame Inter-chr p13.3 q23.31 Oncogene Tumor suppressor gene Seq+ 72336 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHC2-RNF126 SHC2 chr19 460529 - RNF126 chr19 652884 - Exonic hg19 SKCM TCGA-ER-A19T-01A 23 11 In-Frame Intra-chr p13.3 p13.3 Seq+ 72337 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHC2-TJP3 SHC2 chr19 440862 - TJP3 chr19 3750136 + Exonic hg19 LGG TCGA-DB-5270-01A 5 3 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 72338 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHC2-ZNF559 SHC2 chr19 430684 - ZNF559 chr19 9451778 + Exonic hg19 SARC TCGA-FX-A3NK-01A 3 3 In-Frame Intra-chr p13.3 p13.2 Transcription factor 72339 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHC3-PTPLAD2 SHC3 chr9 91792902 - PTPLAD2 chr9 21029397 - Exonic hg19 LGG TCGA-E1-A7YI-01A 2 3 Out-of-frame Intra-chr q22.1 Tumor suppressor gene 72340 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHH-PLCB1 SHH chr7 155604517 - PLCB1 chr20 8696911 + Exonic hg19 LUSC TCGA-77-A5G3-01A 2 3 Out-of-frame Inter-chr q36.3 p12.3 Seq+ 72341 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHISA5-IP6K2 SHISA5 chr3 48538570 - IP6K2 chr3 48732851 - Exonic hg19 CESC TCGA-VS-A8EC-01A 8 14 In-Frame Intra-chr p21.31 p21.31 Seq+ 72342 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHKBP1-DDX21 SHKBP1 chr19 41097301 - DDX21 chr10 70723858 + Exonic hg19 DLBC TCGA-FF-A7CQ-01A 2 4 Out-of-frame Inter-chr q13.2 q22.1 72343 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHPK-ATP2A3 SHPK chr17 3527342 - ATP2A3 chr17 3857004 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 7 3 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 72344 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHPK-GUCY1A2 SHPK chr17 3533499 - GUCY1A2 chr11 106856857 - Exonic hg19 BLCA TCGA-2F-A9KO-01A 6 1 Out-of-frame Inter-chr p13.2 q22.3 Oncogene Seq+ 72345 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHPRH-NDUFS5 SHPRH chr6 146285293 - NDUFS5 chr1 39494395 + Exonic hg19 BLCA TCGA-GD-A2C5-01A 323 221 5'UTR-5'UTR Inter-chr q24.3 Tumor suppressor gene p34.3 Seq+ 72346 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHPRH-PKIB SHPRH chr6 146240484 - PKIB chr6 123038932 + Exonic hg19 LIHC TCGA-DD-A113-01A 6 4 CDS-5'UTR Intra-chr q24.3 Tumor suppressor gene q22.31 Seq+ 72347 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHPRH-RCL1 SHPRH chr6 146273485 - RCL1 chr9 4860125 + Exonic hg19 BLCA TCGA-GC-A4ZW-01A 13 6 Out-of-frame Inter-chr q24.3 Tumor suppressor gene p24.1 Seq+ 72348 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHQ1-PSMB7 SHQ1 chr3 72897349 - PSMB7 chr9 127146935 - Exonic hg19 PRAD TCGA-ZG-A9LZ-01A 132 92 Out-of-frame Inter-chr p13 Tumor suppressor gene q33.3 Seq+ 72349 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHROOM2-BHLHE41 SHROOM2 chrX 9754750 - BHLHE41 chr12 26277515 - Exonic hg19 LUAD TCGA-73-4662-01A 8 3 Out-of-frame Inter-chr p22.2 p12.1 Tumor suppressor gene Transcription factor Seq+ 72350 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHROOM2-FRMPD4 SHROOM2 chrX 9912953 - FRMPD4 chrX 12724945 + Exonic hg19 BLCA TCGA-XF-AAMQ-01A 2 4 In-Frame Intra-chr p22.2 p22.2 Seq+ 72351 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHROOM2-REPS2 SHROOM2 chrX 9880627 - REPS2 chrX 17121841 + Exonic hg19 BLCA TCGA-CF-A1HS-01A 5 8 Out-of-frame Intra-chr p22.2 p22.2 Seq+ 72352 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHROOM3-FAM47E SHROOM3 chr4 77631440 - FAM47E chr4 77177331 + Exonic hg19 LUAD TCGA-38-4630-01A 3 1 In-Frame Intra-chr q21.1 q21.1 Seq+ 72353 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHROOM3-FAM47E SHROOM3 chr4 77476916 - FAM47E chr4 77230297 + Exonic hg19 LIHC TCGA-BC-A10T-01A 5 2 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 72354 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHROOM3-FAM47E SHROOM3 chr4 77680848 - FAM47E chr4 77230297 + Exonic hg19 ESCA TCGA-VR-A8Q7-01A 4 25 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 72355 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHROOM4-AR SHROOM4 chrX 50438786 - AR chrX 66905852 + Exonic hg19 CHOL TCGA-ZH-A8Y4-01A 4 3 Out-of-frame Intra-chr p11.22 q12 Oncogene Tumor suppressor gene Transcription factor Seq+ 72356 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHROOM4-ARID3A SHROOM4 chrX 50556902 - ARID3A chr19 960092 + Exonic hg19 UCEC TCGA-BK-A0CC-01A 21 36 In-Frame Inter-chr p11.22 p13.3 Transcription factor Seq+ 72357 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SHROOM4-PAGE1 SHROOM4 chrX 50556902 - PAGE1 chrX 49459381 - Exonic hg19 KIRC TCGA-B0-4838-01A 2 2 CDS-5'UTR Intra-chr p11.22 p11.23 72358 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIAE-GRIK4 SIAE chr11 124530524 - GRIK4 chr11 120823564 + Exonic hg19 UCEC TCGA-A5-A1OH-01A 2 5 In-Frame Intra-chr q24.2 q23.3 72359 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIAE-HYLS1 SIAE chr11 124539256 - HYLS1 chr11 125769239 + Exonic hg19 GBM TCGA-06-0125-02A 3 1 CDS-5'UTR Intra-chr q24.2 q24.2 Seq+ 72360 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIAH1-FAM65A SIAH1 chr16 48419115 - FAM65A chr16 67572327 + Exonic hg19 SKCM TCGA-BF-A9VF-01A 3 3 5'UTR-5'UTR Intra-chr q12.1 Tumor suppressor gene Seq+ 72361 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIAH2-KIAA1430 SIAH2 chr3 150480220 - KIAA1430 chr4 186085333 - Exonic hg19 BRCA TCGA-AC-A6IW-01A 5 9 In-Frame Inter-chr q25.1 Seq+ 72362 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIK1-HUNK SIK1 chr21 44845287 - HUNK chr21 33312477 + Exonic hg19 HNSC TCGA-CR-7372-01A 2 6 Out-of-frame Intra-chr q22.3 Tumor suppressor gene q22.11 CAMK:CAMKL Seq+ 72363 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIK2-C11orf53 SIK2 chr11 111491126 - C11orf53 chr11 111152123 + Exonic hg19 CESC TCGA-ZJ-AAXB-01A 13 5 CDS-5'UTR Intra-chr q23.1 q23.1 Seq+ 72364 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIK2-CARD17 SIK2 chr11 111491126 - CARD17 chr11 104970148 - Exonic hg19 LUSC TCGA-94-7557-01A 41 40 In-Frame Intra-chr q23.1 q22.3 Seq+ 72365 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIK2-JAK2 SIK2 chr11 111491126 - JAK2 chr9 5021963 + Exonic hg19 BRCA TCGA-AO-A0J6-01A 2 1 CDS-5'UTR Inter-chr q23.1 p24.1 TK:JakA Oncogene 72366 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIK2-MEGF11 SIK2 chr11 111558886 - MEGF11 chr15 66274826 - Exonic hg19 LGG TCGA-DU-7298-01A 6 8 In-Frame Inter-chr q23.1 q22.31 Seq+ 72367 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIK2-PIR SIK2 chr11 111583099 - PIR chrX 15477863 - Exonic hg19 PRAD TCGA-G9-6361-01A 59 37 In-Frame Inter-chr q23.1 p22.2 Seq+ 72368 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIK3-C11orf1 SIK3 chr11 116968859 - C11orf1 chr11 111753092 + Exonic hg19 LAML TCGA-AB-2832-03A 7 6 In-Frame Intra-chr q23.3 q23.1 Seq+ 72369 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIK3-CD3D SIK3 chr11 116968859 - CD3D chr11 118210209 - Exonic hg19 LUAD TCGA-73-4658-01A 3 4 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 72370 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIK3-CNTN5 SIK3 chr11 116797935 - CNTN5 chr11 100126492 + Exonic hg19 HNSC TCGA-CQ-A4C7-01A 5 1 In-Frame Intra-chr q23.3 q22.1 72371 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIK3-CTNNBIP1 SIK3 chr11 116968859 - CTNNBIP1 chr1 9910834 - Exonic hg19 ACC TCGA-OR-A5K5-01A 50 34 Out-of-frame Inter-chr q23.3 p36.22 Tumor suppressor gene Seq+ 72372 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIK3-PPP1R1B SIK3 chr11 116968859 - PPP1R1B chr17 37785423 + Exonic hg19 BRCA TCGA-EW-A2FR-01A 101 83 In-Frame Inter-chr q23.3 q12 Tumor suppressor gene Seq+ 72373 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIL1-CTNNA1 SIL1 chr5 138532130 - CTNNA1 chr5 138264935 + Exonic hg19 UCEC TCGA-FI-A2EY-01A 2 1 5'UTR-CDS Intra-chr q31.2 q31.2 Oncogene Seq+ 72374 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIL1-DNAJC18 SIL1 chr5 138456724 - DNAJC18 chr5 138749961 - Exonic hg19 HNSC TCGA-CN-A63T-01A 9 12 In-Frame Intra-chr q31.2 q31.2 Seq+ 72375 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIL1-DNAJC18 SIL1 chr5 138533958 - DNAJC18 chr5 138760803 - Exonic hg19 UCEC TCGA-EY-A2OQ-01A 5 1 5'UTR-CDS Intra-chr q31.2 q31.2 Seq+ 72376 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIL1-NRG2 SIL1 chr5 138456724 - NRG2 chr5 139267096 - Exonic hg19 BRCA TCGA-BH-A0H9-01A 54 51 In-Frame Intra-chr q31.2 q31.2 Seq+ 72377 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIL1-PAIP2 SIL1 chr5 138456724 - PAIP2 chr5 138699448 + Exonic hg19 SARC TCGA-DX-A48P-01A 11 3 CDS-5'UTR Intra-chr q31.2 q31.2 Tumor suppressor gene Seq+ 72378 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIL1-SLC23A1 SIL1 chr5 138456724 - SLC23A1 chr5 138716575 - Exonic hg19 UCEC TCGA-2E-A9G8-01A 6 2 Out-of-frame Intra-chr q31.2 q31.2 72379 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIL1-SMC1B SIL1 chr5 138532130 - SMC1B chr22 45779493 - Exonic hg19 LUSC TCGA-NC-A5HL-01A 6 5 5'UTR-CDS Inter-chr q31.2 q13.31 Seq+ 72380 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIL1-STK10 SIL1 chr5 138456724 - STK10 chr5 171583792 - Exonic hg19 BRCA TCGA-B6-A0IE-01A 4 1 Out-of-frame Intra-chr q31.2 q35.1 Tumor suppressor gene 72381 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIM1-ASCC3 SIM1 chr6 100868666 - ASCC3 chr6 100988263 - Exonic hg19 LUAD TCGA-69-7760-01A 5 4 In-Frame Intra-chr q16.3 Transcription factor q16.3 Seq+ 72382 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIM2-GRIK1 SIM2 chr21 38072221 - GRIK1 chr21 31066382 - Exonic hg19 LIHC TCGA-RC-A6M3-01A 2 3 In-Frame Intra-chr q22.13 Transcription factor q21.3 Seq+ 72383 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIM2-KCNJ6 SIM2 chr21 38072221 - KCNJ6 chr21 39213011 - Exonic hg19 LGG TCGA-DU-6406-01A 40 21 CDS-5'UTR Intra-chr q22.13 Transcription factor q22.13 Seq+ 72384 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIM2-MORC3 SIM2 chr21 38103452 - MORC3 chr21 37721609 + Exonic hg19 ESCA TCGA-L5-A891-01A 3 10 Out-of-frame Intra-chr q22.13 Transcription factor q22.12 Seq+ 72385 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIN3A-CSPG4 SIN3A chr15 75743764 - CSPG4 chr15 75985574 - Exonic hg19 BRCA TCGA-3C-AAAU-01A 3 2 5'UTR-CDS Intra-chr q24.2 q24.2 Seq+ 72386 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIN3A-NEO1 SIN3A chr15 75743764 - NEO1 chr15 73528688 + Exonic hg19 BRCA TCGA-PE-A5DD-01A 6 5 5'UTR-CDS Intra-chr q24.2 q24.1 Seq+ 72387 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIN3A-OCA2 SIN3A chr15 75743764 - OCA2 chr15 28211968 - Exonic hg19 BLCA TCGA-G2-AA3D-01A 3 2 5'UTR-CDS Intra-chr q24.2 q13.1 Seq+ 72388 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIN3A-PTPN9 SIN3A chr15 75722528 - PTPN9 chr15 75819602 - Exonic hg19 LGG TCGA-CS-5396-01A 3 5 In-Frame Intra-chr q24.2 q24.2 72389 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIN3A-SEMA7A SIN3A chr15 75743764 - SEMA7A chr15 74711293 - Exonic hg19 COAD TCGA-F4-6461-01A 5 2 5'UTR-5'UTR Intra-chr q24.2 q24.1 Seq+ 72390 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIN3B-C19orf57 SIN3B chr19 16952779 - C19orf57 chr19 13996868 - Exonic hg19 SARC TCGA-MJ-A68H-01A 3 3 In-Frame Intra-chr p13.11 p13.12 Seq+ 72391 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIN3B-TBC1D17 SIN3B chr19 16987389 - TBC1D17 chr19 50383536 + Exonic hg19 SARC TCGA-3B-A9HX-01A 88 50 In-Frame Intra-chr p13.11 q13.33 Seq+ 72392 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIN3B-ZNF285 SIN3B chr19 16952779 - ZNF285 chr19 44901421 - Exonic hg19 UCEC TCGA-B5-A0JN-01A 2 2 CDS-5'UTR Intra-chr p13.11 q13.31 Transcription factor 72393 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIPA1-FRMD8 SIPA1 chr11 65412600 - FRMD8 chr11 65178713 + Exonic hg19 CESC TCGA-DS-A1O9-01A 14 10 In-Frame Intra-chr q13.1 q13.1 Seq+ 72394 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIPA1-RHOD SIPA1 chr11 65415129 - RHOD chr11 66833367 + Exonic hg19 CESC TCGA-C5-A1M8-01A 5 6 Out-of-frame Intra-chr q13.1 q13.2 Seq+ 72395 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIPA1L1-NF1 SIPA1L1 chr14 71979562 - NF1 chr17 29652838 + Exonic hg19 BRCA TCGA-BH-A18V-06A 2 1 5'UTR-CDS Inter-chr q24.2 q11.2 Oncogene Tumor suppressor gene 72396 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIPA1L2-NTPCR SIPA1L2 chr1 232629273 - NTPCR chr1 233113909 + Exonic hg19 MESO TCGA-SH-A9CU-01A 9 11 In-Frame Intra-chr q42.2 q42.2 Seq+ 72397 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIPA1L2-TRIM11 SIPA1L2 chr1 232626620 - TRIM11 chr1 228589862 - Exonic hg19 PRAD TCGA-VP-A876-01A 3 3 In-Frame Intra-chr q42.2 q42.13 Seq+ 72398 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIPA1L2-ZNF252 SIPA1L2 chr1 232607117 - ZNF252 chr8 146203939 - Exonic hg19 BRCA TCGA-B6-A0IQ-01A 3 3 Out-of-frame Inter-chr q42.2 72399 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIPA1L3-CEP89 SIPA1L3 chr19 38682950 - CEP89 chr19 33372919 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 57 68 In-Frame Intra-chr q13.13 q13.11 Seq+ 72400 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIPA1L3-COLEC10 SIPA1L3 chr19 38397998 - COLEC10 chr8 120118039 + Exonic hg19 UCEC TCGA-FI-A3PV-01A 3 1 5'UTR-CDS Inter-chr q13.13 q24.12 Seq+ 72401 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIPA1L3-EIF3B SIPA1L3 chr19 38519796 - EIF3B chr7 2411412 + Exonic hg19 STAD TCGA-CD-A4MH-01A 11 131 5'UTR-CDS Inter-chr q13.13 p22.3 Seq+ 72402 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIPA1L3-ERC1 SIPA1L3 chr19 38579491 - ERC1 chr12 1192330 + Exonic hg19 OV TCGA-5X-AA5U-01A 3 23 In-Frame Inter-chr q13.13 Seq+ 72403 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIPA1L3-ETHE1 SIPA1L3 chr19 38655546 - ETHE1 chr19 44015718 - Exonic hg19 BRCA TCGA-AR-A0TT-01A 2 2 Out-of-frame Intra-chr q13.13 q13.31 Seq+ 72404 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIPA1L3-GPI SIPA1L3 chr19 38519796 - GPI chr19 34884153 + Exonic hg19 BLCA TCGA-GU-A764-01A 32 24 5'UTR-CDS Intra-chr q13.13 Seq+ 72405 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIPA1L3-LIG1 SIPA1L3 chr19 38397998 - LIG1 chr19 48619222 - Exonic hg19 PRAD TCGA-V1-A9O5-06A 9 4 5'UTR-CDS Intra-chr q13.13 q13.33 Tumor suppressor gene 72406 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIPA1L3-LSM14A SIPA1L3 chr19 38519796 - LSM14A chr19 34706029 + Exonic hg19 BRCA TCGA-AN-A0XN-01A 5 5 5'UTR-CDS Intra-chr q13.13 Seq+ 72407 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIPA1L3-PTOV1 SIPA1L3 chr19 38633350 - PTOV1 chr19 50357663 + Exonic hg19 STAD TCGA-CG-4443-01A 14 10 Out-of-frame Intra-chr q13.13 q13.33 Seq+ 72408 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIPA1L3-RAB8A SIPA1L3 chr19 38397998 - RAB8A chr19 16236280 + Exonic hg19 UCEC TCGA-PG-A914-01A 3 10 5'UTR-CDS Intra-chr q13.13 p13.11 Seq+ 72409 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIPA1L3-WDR62 SIPA1L3 chr19 38643607 - WDR62 chr19 36549682 + Exonic hg19 PRAD TCGA-EJ-A46G-01A 6 6 Out-of-frame Intra-chr q13.13 q13.12 Seq+ 72410 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIPA1L3-ZNF835 SIPA1L3 chr19 38684420 - ZNF835 chr19 57176613 - Exonic hg19 BRCA TCGA-A2-A0EV-01A 2 1 CDS-5'UTR Intra-chr q13.13 q13.43 Transcription factor 72411 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIRT1-CELF2 SIRT1 chr10 69651312 - CELF2 chr10 11299701 + Exonic hg19 LUAD TCGA-69-7978-01A 5 4 Out-of-frame Intra-chr q21.3 Tumor suppressor gene p14 Seq+ 72412 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIRT1-DNAJC12 SIRT1 chr10 69651312 - DNAJC12 chr10 69583150 - Exonic hg19 LUSC TCGA-85-A50M-01A 159 64 In-Frame Intra-chr q21.3 Tumor suppressor gene q21.3 Seq+ 72413 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIRT5-PHACTR1 SIRT5 chr6 13601181 - PHACTR1 chr6 13273092 + Exonic hg19 PRAD TCGA-YJ-A8SW-01A 2 1 In-Frame Intra-chr p23 72414 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIRT6-CERS4 SIRT6 chr19 4175677 - CERS4 chr19 8315960 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 14 4 CDS-5'UTR Intra-chr p13.3 Tumor suppressor gene p13.2 Seq+ 72415 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIRT6-CREB3L3 SIRT6 chr19 4180779 - CREB3L3 chr19 4156995 + Exonic hg19 LUSC TCGA-85-8277-01A 54 27 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p13.3 Transcription factor Seq+ 72416 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIRT7-CCDC57 SIRT7 chr17 79872170 - CCDC57 chr17 80059742 - Exonic hg19 BRCA TCGA-A7-A13D-01A 4 4 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 72417 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SIX1-CYB5R2 SIX1 chr14 61115348 - CYB5R2 chr11 7689792 - Exonic hg19 BRCA TCGA-A2-A3XW-01A 3 8 Out-of-frame Inter-chr q23.1 Transcription factor p15.4 Tumor suppressor gene Seq+ 72418 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKA2-HEATR6 SKA2 chr17 57232492 - HEATR6 chr17 58137457 - Exonic hg19 SARC TCGA-DX-A3M1-01A 14 13 In-Frame Intra-chr q22 q23.1 Seq+ 72419 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKAP1-ABCC11 SKAP1 chr17 46423267 - ABCC11 chr16 48211024 - Exonic hg19 BRCA TCGA-BH-A0C3-01A 28 15 Out-of-frame Inter-chr q21.32 q12.1 Seq+ 72420 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKAP1-BCAS3 SKAP1 chr17 46423267 - BCAS3 chr17 58885365 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 5 9 In-Frame Intra-chr q21.32 q23.2 Seq+ 72421 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKAP1-CALCOCO2 SKAP1 chr17 46423267 - CALCOCO2 chr17 46919060 + Exonic hg19 SKCM TCGA-EB-A4XL-01A 4 3 CDS-5'UTR Intra-chr q21.32 q21.32 Seq+ 72422 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKAP1-DNAH17 SKAP1 chr17 46423267 - DNAH17 chr17 76481115 - Exonic hg19 KIRC TCGA-BP-4983-01A 3 3 In-Frame Intra-chr q21.32 q25.3 Seq+ 72423 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKAP1-HOXB3 SKAP1 chr17 46441151 - HOXB3 chr17 46632980 - Exonic hg19 LUAD TCGA-38-4630-01A 4 2 CDS-5'UTR Intra-chr q21.32 q21.32 Transcription factor Seq+ 72424 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKAP1-HOXB6 SKAP1 chr17 46507437 - HOXB6 chr17 46675590 - Exonic hg19 UCEC TCGA-BK-A139-02A 2 1 CDS-5'UTR Intra-chr q21.32 q21.32 Transcription factor 72425 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKAP1-HOXB9 SKAP1 chr17 46423267 - HOXB9 chr17 46700497 - Exonic hg19 OV TCGA-VG-A8LO-01A 4 19 In-Frame Intra-chr q21.32 q21.32 Transcription factor Seq+ 72426 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKAP1-IKZF3 SKAP1 chr17 46423267 - IKZF3 chr17 37922746 - Exonic hg19 BRCA TCGA-AR-A24U-01A 16 11 In-Frame Intra-chr q21.32 q21.1 Tumor suppressor gene Transcription factor Seq+ 72427 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKAP1-NQO2 SKAP1 chr17 46423267 - NQO2 chr6 2994165 + Exonic hg19 OV TCGA-20-1687-01A 5 5 CDS-5'UTR Inter-chr q21.32 p25.2 Seq+ 72428 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKAP1-PSMD11 SKAP1 chr17 46423267 - PSMD11 chr17 30773963 + Exonic hg19 PAAD TCGA-XD-AAUI-01A 3 2 In-Frame Intra-chr q21.32 q11.2 Seq+ 72429 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKAP1-TMEM100 SKAP1 chr17 46423267 - TMEM100 chr17 53800090 - Exonic hg19 BRCA TCGA-AO-A0JG-01A 25 10 CDS-5'UTR Intra-chr q21.32 q22 Seq+ 72430 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKAP1-YPEL2 SKAP1 chr17 46423267 - YPEL2 chr17 57465688 + Exonic hg19 BRCA TCGA-C8-A275-01A 5 6 Out-of-frame Intra-chr q21.32 q22 Seq+ 72431 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKI-CA6 SKI chr1 2161174 - CA6 chr1 9027718 + Exonic hg19 SKCM TCGA-D9-A4Z2-01A 3 2 Out-of-frame Intra-chr p36.33 Transcription factor p36.23 Seq+ 72432 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKI-CAPZB SKI chr1 2161174 - CAPZB chr1 19746244 - Exonic hg19 SARC TCGA-DX-A7EU-01A 17 21 In-Frame Intra-chr p36.33 Transcription factor p36.13 Seq+ 72433 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKI-KCNT2 SKI chr1 2161174 - KCNT2 chr1 196461471 - Exonic hg19 BRCA TCGA-D8-A27F-01A 14 3 Out-of-frame Intra-chr p36.33 Transcription factor q31.3 Seq+ 72434 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKI-PRKCZ SKI chr1 2161174 - PRKCZ chr1 2087434 + Exonic hg19 BLCA TCGA-4Z-AA7Q-01A 3 5 In-Frame Intra-chr p36.33 Transcription factor p36.33 Seq+ 72435 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKI-PRKCZ SKI chr1 2161174 - PRKCZ chr1 2066701 + Exonic hg19 BRCA TCGA-A7-A26G-01A 3 1 Out-of-frame Intra-chr p36.33 Transcription factor p36.33 Seq+ 72436 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKI-PRKCZ SKI chr1 2161174 - PRKCZ chr1 2066701 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 2 1 Out-of-frame Intra-chr p36.33 Transcription factor p36.33 Seq+ 72437 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKI-SSU72 SKI chr1 2161174 - SSU72 chr1 1500296 - Exonic hg19 GBM TCGA-06-2565-01A 8 6 Out-of-frame Intra-chr p36.33 Transcription factor p36.33 Seq+ 72438 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKIL-FNDC3B SKIL chr3 170079217 - FNDC3B chr3 172064117 + Exonic hg19 LUSC TCGA-56-7580-01A 387 183 In-Frame Intra-chr q26.2 Tumor suppressor gene Transcription factor q26.31 Seq+ 72439 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKIL-GPR160 SKIL chr3 170079217 - GPR160 chr3 169756703 + Exonic hg19 BRCA TCGA-EW-A3U0-01A 5 6 CDS-5'UTR Intra-chr q26.2 Tumor suppressor gene Transcription factor q26.2 72440 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKIL-PRKCI SKIL chr3 170079217 - PRKCI chr3 169981167 + Exonic hg19 COAD TCGA-DM-A0XF-01A 5 1 Out-of-frame Intra-chr q26.2 Tumor suppressor gene Transcription factor q26.2 72441 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKIL-TNIK SKIL chr3 170079217 - TNIK chr3 171087474 - Exonic hg19 STAD TCGA-VQ-AA6B-01A 7 161 In-Frame Intra-chr q26.2 Tumor suppressor gene Transcription factor q26.31 STE:STE20 Seq+ 72442 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKIV2L-MSH5 SKIV2L chr6 31934623 - MSH5 chr6 31715164 + Exonic hg19 BRCA TCGA-BH-A0DX-01A 2 5 Out-of-frame Intra-chr 72443 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKIV2L2-BASP1 SKIV2L2 chr5 54711960 - BASP1 chr5 17275317 + Exonic hg19 PRAD TCGA-YL-A9WL-01A 5 2 CDS-5'UTR Intra-chr q11.2 p15.1 Tumor suppressor gene Seq+ 72444 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKIV2L2-CCNO SKIV2L2 chr5 54623606 - CCNO chr5 54528374 - Exonic hg19 PRAD TCGA-HC-A8D1-01A 2 1 In-Frame Intra-chr q11.2 q11.2 72445 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKIV2L2-CETN3 SKIV2L2 chr5 54662703 - CETN3 chr5 89689924 - Exonic hg19 BRCA TCGA-C8-A27A-01A 88 38 In-Frame Intra-chr q11.2 q14.3 Seq+ 72446 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKIV2L2-F2R SKIV2L2 chr5 54603975 - F2R chr5 76028139 + Exonic hg19 PRAD TCGA-J4-A83I-01A 2 3 Out-of-frame Intra-chr q11.2 q13.3 72447 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKIV2L2-GPBP1 SKIV2L2 chr5 54603975 - GPBP1 chr5 56509901 + Exonic hg19 SARC TCGA-K1-A6RU-01A 3 1 CDS-5'UTR Intra-chr q11.2 q11.2 Transcription factor Seq+ 72448 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKIV2L2-MACROD2 SKIV2L2 chr5 54718810 - MACROD2 chr20 15866409 + Exonic hg19 SARC TCGA-MB-A5Y9-01A 2 13 In-Frame Inter-chr q11.2 p12.1 Seq+ 72449 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKIV2L2-PCDHGB4 SKIV2L2 chr5 54624639 - PCDHGB4 chr5 140874374 + Exonic hg19 COAD TCGA-CM-6163-01A 25 8 Out-of-frame Intra-chr q11.2 q31.3 Seq+ 72450 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKIV2L2-SCCPDH SKIV2L2 chr5 54711960 - SCCPDH chr1 246890194 + Exonic hg19 PRAD TCGA-EJ-5519-01A 108 38 In-Frame Inter-chr q11.2 q44 Seq+ 72451 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKIV2L2-USP28 SKIV2L2 chr5 54662703 - USP28 chr11 113679976 - Exonic hg19 OV TCGA-13-0893-01B 2 2 In-Frame Inter-chr q11.2 q23.2 72452 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SKP1-PMPCA SKP1 chr5 133561451 - PMPCA chr9 139316284 + Exonic hg19 STAD TCGA-R5-A7ZF-01A 2 2 5'UTR-CDS Inter-chr q31.1 q34.3 72453 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLAMF1-CD1A SLAMF1 chr1 160616660 - CD1A chr1 158224874 + Exonic hg19 LUAD TCGA-55-7573-01A 2 1 In-Frame Intra-chr q23.3 q23.1 72454 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLAMF1-CD1A SLAMF1 chr1 160604403 - CD1A chr1 158224874 + Exonic hg19 LUAD TCGA-86-7953-01A 3 1 In-Frame Intra-chr q23.3 q23.1 72455 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLAMF1-CD1A SLAMF1 chr1 160616660 - CD1A chr1 158224874 + Exonic hg19 THCA TCGA-FE-A232-01A 2 1 In-Frame Intra-chr q23.3 q23.1 72456 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLAMF1-CD1C SLAMF1 chr1 160616660 - CD1C chr1 158260924 + Exonic hg19 LUAD TCGA-55-8619-01A 2 1 In-Frame Intra-chr q23.3 q23.1 72457 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLBP-LETM1 SLBP chr4 1696501 - LETM1 chr4 1827410 - Exonic hg19 HNSC TCGA-CR-7370-01A 86 22 In-Frame Intra-chr p16.3 p16.3 Seq+ 72458 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLBP-LETM1 SLBP chr4 1713601 - LETM1 chr4 1817529 - Exonic hg19 LUSC TCGA-LA-A7SW-01A 35 27 In-Frame Intra-chr p16.3 p16.3 Seq+ 72459 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC10A7-EYS SLC10A7 chr4 147442770 - EYS chr6 65767620 - Exonic hg19 PRAD TCGA-HC-A632-01A 3 2 In-Frame Inter-chr q31.22 q12 Seq+ 72460 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC10A7-FKBP15 SLC10A7 chr4 147363935 - FKBP15 chr9 115932909 - Exonic hg19 PRAD TCGA-G9-6361-01A 5 3 In-Frame Inter-chr q31.22 q32 Seq+ 72461 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC10A7-TTC29 SLC10A7 chr4 147438190 - TTC29 chr4 147628703 - Exonic hg19 OV TCGA-13-0760-01A 2 4 Out-of-frame Intra-chr q31.22 q31.22 Seq+ 72462 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC11A2-PFKM SLC11A2 chr12 51386593 - PFKM chr12 48516550 + Exonic hg19 GBM TCGA-06-0129-01A 7 14 Out-of-frame Intra-chr q13.12 q13.11 Seq+ 72463 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC12A2-MEGF10 SLC12A2 chr5 127487088 - MEGF10 chr5 126790258 + Exonic hg19 STAD TCGA-BR-8590-01A 14 45 In-Frame Intra-chr q23.3 q23.2 Seq+ 72464 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC12A4-DPEP2 SLC12A4 chr16 67991645 - DPEP2 chr16 68033651 - Exonic hg19 ACC TCGA-OR-A5JE-01A 11 2 CDS-5'UTR Intra-chr q22.1 q22.1 Seq+ 72465 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC12A7-CLPTM1L SLC12A7 chr5 1073748 - CLPTM1L chr5 1331998 - Exonic hg19 LIHC TCGA-BC-A10R-01A 6 4 In-Frame Intra-chr p15.33 p15.33 Seq+ 72466 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC12A7-RASGEF1C SLC12A7 chr5 1111983 - RASGEF1C chr5 179565058 - Exonic hg19 LUAD TCGA-95-A4VK-01A 24 28 CDS-5'UTR Intra-chr p15.33 q35.3 Seq+ 72467 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC12A7-SKIV2L2 SLC12A7 chr5 1057586 - SKIV2L2 chr5 54720548 + Exonic hg19 LIHC TCGA-2Y-A9H0-01A 168 126 Out-of-frame Intra-chr p15.33 q11.2 Seq+ 72468 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC12A7-TERT SLC12A7 chr5 1111983 - TERT chr5 1282739 - Exonic hg19 LIHC TCGA-BC-A3KG-01A 5 3 In-Frame Intra-chr p15.33 p15.33 Oncogene Seq+ 72469 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC12A7-TERT SLC12A7 chr5 1074682 - TERT chr5 1266650 - Exonic hg19 STAD TCGA-BR-4357-01A 238 201 In-Frame Intra-chr p15.33 p15.33 Oncogene Seq+ 72470 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC12A7-TERT SLC12A7 chr5 1060459 - TERT chr5 1282739 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 4 1 Out-of-frame Intra-chr p15.33 p15.33 Oncogene Seq+ 72471 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC12A7-TERT SLC12A7 chr5 1111983 - TERT chr5 1282739 - Exonic hg19 LIHC TCGA-ZS-A9CF-01A 12 8 In-Frame Intra-chr p15.33 p15.33 Oncogene Seq+ 72472 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC12A7-TMEM117 SLC12A7 chr5 1094269 - TMEM117 chr12 44693363 + Exonic hg19 LUAD TCGA-55-6982-01A 17 10 Out-of-frame Inter-chr p15.33 q12 Seq+ 72473 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC12A8-BCAS1 SLC12A8 chr3 124854513 - BCAS1 chr20 52591969 - Exonic hg19 LUSC TCGA-22-1016-01A 14 10 Out-of-frame Inter-chr q21.2 q13.2 Seq+ 72474 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC12A8-BFSP2 SLC12A8 chr3 124930143 - BFSP2 chr3 133169147 + Exonic hg19 BRCA TCGA-D8-A1XR-01A 89 53 In-Frame Intra-chr q21.2 q22.1 Seq+ 72475 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC12A8-OSBPL11 SLC12A8 chr3 124996570 - OSBPL11 chr3 125257477 - Exonic hg19 CESC TCGA-C5-A7X5-01A 2 2 5'UTR-CDS Intra-chr q21.2 q21.2 72476 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC12A8-SLC41A3 SLC12A8 chr3 124996570 - SLC41A3 chr3 125745322 - Exonic hg19 UCEC TCGA-2E-A9G8-01A 11 1 5'UTR-CDS Intra-chr q21.2 q21.3 72477 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC12A8-TMEM131 SLC12A8 chr3 124930143 - TMEM131 chr2 98543950 - Exonic hg19 BRCA TCGA-AO-A12C-01A 2 1 Out-of-frame Inter-chr q21.2 q11.2 72478 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC15A4-TMEM132D SLC15A4 chr12 129299320 - TMEM132D chr12 130185243 - Exonic hg19 PRAD TCGA-M7-A724-01A 5 3 Out-of-frame Intra-chr q24.33 q24.33 Seq+ 72479 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC16A1-SENP6 SLC16A1 chr1 113471714 - SENP6 chr6 76331248 + Exonic hg19 LUAD TCGA-44-2668-01A 3 2 In-Frame Inter-chr q14.1 Seq+ 72480 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC16A10-NME7 SLC16A10 chr6 111498868 - NME7 chr1 169102055 - Exonic hg19 CESC TCGA-Q1-A6DT-01A 103 43 In-Frame Inter-chr q21 q24.2 Seq+ 72481 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC16A14-SP110 SLC16A14 chr2 230914477 - SP110 chr2 231076268 - Exonic hg19 LUAD TCGA-78-7536-01A 535 399 In-Frame Intra-chr q36.3 q37.1 Transcription factor Seq+ 72482 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC16A5-ICT1 SLC16A5 chr17 73096911 - ICT1 chr17 73015795 + Exonic hg19 BRCA TCGA-A8-A09A-01A 15 11 In-Frame Intra-chr q25.1 Seq+ 72483 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC16A5-KCTD2 SLC16A5 chr17 73094276 - KCTD2 chr17 73059113 + Exonic hg19 SKCM TCGA-Z2-AA3S-06A 3 1 Out-of-frame Intra-chr q25.1 q25.1 72484 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC16A5-OTOP2 SLC16A5 chr17 73085399 - OTOP2 chr17 72923318 + Exonic hg19 LUAD TCGA-55-7576-01A 17 6 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 72485 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC16A6-CA4 SLC16A6 chr17 66268780 - CA4 chr17 58232675 + Exonic hg19 BLCA TCGA-XF-AAMX-01A 2 1 In-Frame Intra-chr q24.2 q23.1 72486 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC16A7-ACSS3 SLC16A7 chr12 59990017 - ACSS3 chr12 81528595 + Exonic hg19 SARC TCGA-DX-A7EI-01A 81 47 5'UTR-CDS Intra-chr q14.1 q21.31 72487 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC16A7-BEST3 SLC16A7 chr12 60169256 - BEST3 chr12 70072673 - Exonic hg19 SARC TCGA-DX-A1KU-01A 2 1 In-Frame Intra-chr q14.1 q15 72488 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC16A7-GOLPH3 SLC16A7 chr12 59990017 - GOLPH3 chr5 32135792 - Exonic hg19 SKCM TCGA-EB-A44Q-06A 5 9 5'UTR-CDS Inter-chr q14.1 p13.3 Seq+ 72489 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC16A7-HOXC13 SLC16A7 chr12 59990017 - HOXC13 chr12 54338784 + Exonic hg19 BLCA TCGA-DK-AA71-01A 2 1 5'UTR-CDS Intra-chr q14.1 q13.13 Transcription factor 72490 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC16A7-NUP107 SLC16A7 chr12 59990017 - NUP107 chr12 69127232 + Exonic hg19 SARC TCGA-DX-A1L0-01A 212 150 5'UTR-CDS Intra-chr q14.1 q15 Seq+ 72491 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC16A7-RP11-362K2.2 SLC16A7 chr12 59990017 - RP11-362K2.2 chr12 59206196 + Exonic hg19 GBM TCGA-26-5135-01A 24 110 Out-of-frame Intra-chr q14.1 72492 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC16A7-RP11-762I7.5 SLC16A7 chr12 59990017 - RP11-762I7.5 chr12 56154424 - Exonic hg19 ACC TCGA-OR-A5KT-01A 10 10 Out-of-frame Intra-chr q14.1 72493 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC16A7-SYT1 SLC16A7 chr12 59990017 - SYT1 chr12 79441077 + Exonic hg19 SARC TCGA-SG-A6Z7-01A 46 17 5'UTR-5'UTR Intra-chr q14.1 q21.2 Seq+ 72494 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC16A9-ADK SLC16A9 chr10 61469237 - ADK chr10 76468079 + Exonic hg19 BRCA TCGA-AR-A24L-01A 103 105 5'UTR-CDS Intra-chr q21.2 q22.2 Seq+ 72495 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC16A9-ANK3 SLC16A9 chr10 61469237 - ANK3 chr10 61815794 - Exonic hg19 HNSC TCGA-CR-7367-01A 2 2 5'UTR-CDS Intra-chr q21.2 q21.2 72496 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC1A1-SMARCA2 SLC1A1 chr9 4490770 - SMARCA2 chr9 2096657 + Exonic hg19 LUSC TCGA-NC-A5HJ-01A 10 8 Out-of-frame Intra-chr p24.2 p24.3 Tumor suppressor gene Seq+ 72497 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC1A3-C20orf196 SLC1A3 chr5 36608706 - C20orf196 chr20 5753508 + Exonic hg19 LUAD TCGA-38-4630-01A 37 25 CDS-5'UTR Inter-chr p13.2 p12.3 Seq+ 72498 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC1A3-CDH12 SLC1A3 chr5 36608706 - CDH12 chr5 21765208 - Exonic hg19 LUSC TCGA-21-A5DI-01A 2 1 In-Frame Intra-chr p13.2 p14.3 72499 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC1A3-MAPKAP1 SLC1A3 chr5 36608706 - MAPKAP1 chr9 128420078 - Exonic hg19 LUSC TCGA-92-8065-01A 5 4 In-Frame Inter-chr p13.2 q33.3 Seq+ 72500 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC1A3-METTL15 SLC1A3 chr5 36671335 - METTL15 chr11 28311753 + Exonic hg19 BRCA TCGA-D8-A1Y0-01A 2 7 In-Frame Inter-chr p13.2 p14.1 Seq+ 72501 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC1A3-RABEP1 SLC1A3 chr5 36688434 - RABEP1 chr17 5283828 + Exonic hg19 LGG TCGA-DU-6397-01A 2 7 Out-of-frame Inter-chr p13.2 p13.2 72502 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC1A5-AP2A1 SLC1A5 chr19 47285640 - AP2A1 chr19 50285014 + Exonic hg19 CESC TCGA-UC-A7PG-01A 2 6 Out-of-frame Intra-chr q13.32 q13.33 Seq+ 72503 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC1A5-AP2A1 SLC1A5 chr19 47285640 - AP2A1 chr19 50285014 + Exonic hg19 CESC TCGA-UC-A7PG-06A 18 7 Out-of-frame Intra-chr q13.32 q13.33 Seq+ 72504 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC1A5-STAT6 SLC1A5 chr19 47278142 - STAT6 chr12 57496773 - Exonic hg19 PRAD TCGA-CH-5743-01A 2 16 Out-of-frame Inter-chr q13.32 q13.3 Transcription factor 72505 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC1A5-UBTF SLC1A5 chr19 47278142 - UBTF chr17 42288699 - Exonic hg19 CESC TCGA-EA-A410-01A 2 2 3'UTR-3'UTR Inter-chr q13.32 q21.31 72506 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC1A6-AKAP8L SLC1A6 chr19 15075131 - AKAP8L chr19 15491423 - Exonic hg19 UCS TCGA-N8-A56S-01A 15 5 In-Frame Intra-chr p13.12 p13.12 Transcription factor Seq+ 72507 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC20A1-ARRDC5 SLC20A1 chr2 113405315 - ARRDC5 chr19 4896888 - Exonic hg19 SARC TCGA-DX-A8BK-01A 6 2 Out-of-frame Inter-chr q14.1 p13.3 72508 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC20A2-AC130352.1 SLC20A2 chr8 42329620 - AC130352.1 chr8 12388452 + Exonic hg19 PRAD TCGA-VN-A88Q-01A 3 8 Out-of-frame Intra-chr p11.21 p23.1 72509 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC20A2-ADORA3 SLC20A2 chr8 42396681 - ADORA3 chr1 112031489 - Exonic hg19 LIHC TCGA-DD-AAVZ-01A 59 76 Out-of-frame Inter-chr p11.21 p13.2 Seq+ 72510 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC20A2-ANKH SLC20A2 chr8 42286276 - ANKH chr5 14769300 - Exonic hg19 HNSC TCGA-CV-7099-01A 3 2 In-Frame Inter-chr p11.21 p15.2 72511 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC20A2-DOCK8 SLC20A2 chr8 42286276 - DOCK8 chr9 304581 + Exonic hg19 BRCA TCGA-A7-A2KD-01A 2 1 Out-of-frame Inter-chr p11.21 p24.3 72512 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC20A2-FBXW7 SLC20A2 chr8 42358549 - FBXW7 chr4 153247383 - Exonic hg19 LUSC TCGA-60-2714-01A 6 7 5'UTR-CDS Inter-chr p11.21 q31.3 Oncogene Tumor suppressor gene Seq+ 72513 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC20A2-HIP1 SLC20A2 chr8 42286276 - HIP1 chr7 75172293 - Exonic hg19 BRCA TCGA-A8-A08P-01A 11 10 In-Frame Inter-chr p11.21 q11.23 Seq+ 72514 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC20A2-TUSC3 SLC20A2 chr8 42396681 - TUSC3 chr8 15531256 + Exonic hg19 BRCA TCGA-AR-A0U3-01A 9 5 5'UTR-CDS Intra-chr p11.21 p22 Seq+ 72515 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC20A2-ZMAT4 SLC20A2 chr8 42358549 - ZMAT4 chr8 40389757 - Exonic hg19 LUSC TCGA-60-2708-01A 58 37 5'UTR-CDS Intra-chr p11.21 p11.21 Transcription factor Seq+ 72516 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC22A15-ANO1 SLC22A15 chr1 116580009 - ANO1 chr11 69995816 + Exonic hg19 BRCA TCGA-A8-A0A6-01A 7 20 In-Frame Inter-chr p13.1 q13.3 Seq+ 72517 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC22A23-C6orf145 SLC22A23 chr6 3410422 - C6orf145 chr6 3738382 - Exonic hg19 STAD TCGA-BR-4357-01A 5 5 Out-of-frame Intra-chr p25.2 72518 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC22A23-C6orf145 SLC22A23 chr6 3410422 - C6orf145 chr6 3738382 - Exonic hg19 BLCA TCGA-UY-A78K-01A 2 1 Out-of-frame Intra-chr p25.2 72519 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC22A23-CAMTA1 SLC22A23 chr6 3410422 - CAMTA1 chr1 6880241 + Exonic hg19 PRAD TCGA-HC-A632-01A 54 42 Out-of-frame Inter-chr p25.2 p36.31 Tumor suppressor gene Transcription factor Seq+ 72520 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC22A23-ECHDC1 SLC22A23 chr6 3324068 - ECHDC1 chr6 127652175 - Exonic hg19 BLCA TCGA-HQ-A2OE-01A 10 3 Out-of-frame Intra-chr p25.2 q22.33 Seq+ 72521 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC22A23-GRIP1 SLC22A23 chr6 3410422 - GRIP1 chr12 66935730 - Exonic hg19 BRCA TCGA-E2-A1IO-01A 3 1 In-Frame Inter-chr p25.2 q14.3 72522 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC22A23-LRRC49 SLC22A23 chr6 3410422 - LRRC49 chr15 71196891 + Exonic hg19 SKCM TCGA-YD-A89C-06A 88 78 Out-of-frame Inter-chr p25.2 q23 Seq+ 72523 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC22A23-NAALADL2 SLC22A23 chr6 3410422 - NAALADL2 chr3 175455094 + Exonic hg19 BRCA TCGA-E9-A1RH-01A 7 4 Out-of-frame Inter-chr p25.2 q26.31 72524 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC22A23-NRSN1 SLC22A23 chr6 3410422 - NRSN1 chr6 24134547 + Exonic hg19 PRAD TCGA-VP-A87K-01A 3 2 CDS-5'UTR Intra-chr p25.2 p22.3 72525 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC22A23-RP4-761I2.2 SLC22A23 chr6 3456140 - RP4-761I2.2 chr6 11134636 + Exonic hg19 UCEC TCGA-A5-A1OH-01A 11 7 Out-of-frame Intra-chr p25.2 72526 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC22A23-TNFRSF21 SLC22A23 chr6 3410422 - TNFRSF21 chr6 47221257 - Exonic hg19 GBM TCGA-06-0129-01A 13 22 In-Frame Intra-chr p25.2 p12.3 Seq+ 72527 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC22A23-TRAF3 SLC22A23 chr6 3410422 - TRAF3 chr14 103336522 + Exonic hg19 LUSC TCGA-21-1081-01A 24 13 CDS-5'UTR Inter-chr p25.2 q32.32 Seq+ 72528 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC22A25-PACS1 SLC22A25 chr11 62995933 - PACS1 chr11 65998019 + Exonic hg19 LUAD TCGA-97-8174-01A 30 61 Out-of-frame Intra-chr q12.3 q13.1 Seq+ 72529 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC22A3-CYP20A1 SLC22A3 chr6 160864774 - CYP20A1 chr2 204110569 + Exonic hg19 LIHC TCGA-BC-A8YO-01A 5 5 Out-of-frame Inter-chr q25.3 q33.2 Seq+ 72530 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC22A4-PDLIM4 SLC22A4 chr5 131630702 - PDLIM4 chr5 131598302 + Exonic hg19 KIRP TCGA-BQ-5891-01A 47 40 In-Frame Intra-chr q31.1 q31.1 Tumor suppressor gene Seq+ 72531 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC23A2-CDS2 SLC23A2 chr20 4982052 - CDS2 chr20 5163033 + Exonic hg19 COAD TCGA-DM-A1HA-01A 5 1 5'UTR-CDS Intra-chr p13 p12.3 Seq+ 72532 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC23A2-PHKB SLC23A2 chr20 4864288 - PHKB chr16 47674946 + Exonic hg19 LUAD TCGA-38-4630-01A 5 7 Out-of-frame Inter-chr p13 q12.1 Seq+ 72533 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC23A2-TMX4 SLC23A2 chr20 4951439 - TMX4 chr20 7982188 - Exonic hg19 KIRC TCGA-A3-3328-01A 16 9 5'UTR-CDS Intra-chr p13 p12.3 Seq+ 72534 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC24A3-MACROD2 SLC24A3 chr20 19566188 - MACROD2 chr20 15843390 + Exonic hg19 LUSC TCGA-98-8021-01A 5 5 In-Frame Intra-chr p11.23 p12.1 Seq+ 72535 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC24A3-PLCB4 SLC24A3 chr20 19566188 - PLCB4 chr20 9343543 + Exonic hg19 BRCA TCGA-B6-A0WX-01A 2 4 In-Frame Intra-chr p11.23 p12.3 Seq+ 72536 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A10-HGS SLC25A10 chr17 79683080 - HGS chr17 79667497 + Exonic hg19 BRCA TCGA-AN-A0XU-01A 17 20 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 72537 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A10-USP32 SLC25A10 chr17 79671746 - USP32 chr17 58422969 - Exonic hg19 BRCA TCGA-A8-A08O-01A 9 7 5'UTR-CDS Intra-chr q25.3 q23.2 72538 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A13-C7orf55 SLC25A13 chr7 95926210 - C7orf55 chr7 139030247 + Exonic hg19 STAD TCGA-CG-4477-01A 54 7 In-Frame Intra-chr q21.3 Seq+ 72539 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A13-CD2AP SLC25A13 chr7 95813589 - CD2AP chr6 47512342 + Exonic hg19 READ TCGA-EI-6510-01A 14 6 In-Frame Inter-chr q21.3 p12.3 Seq+ 72540 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A13-GTPBP10 SLC25A13 chr7 95951254 - GTPBP10 chr7 89982130 + Exonic hg19 SARC TCGA-HS-A5N9-01A 5 4 In-Frame Intra-chr q21.3 q21.13 Seq+ 72541 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A13-LUC7L2 SLC25A13 chr7 95926210 - LUC7L2 chr7 139030247 + Exonic hg19 STAD TCGA-CG-4477-01A 53 56 In-Frame Intra-chr q21.3 q34 Seq+ 72542 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A13-MAGI2 SLC25A13 chr7 95814239 - MAGI2 chr7 77998530 - Exonic hg19 LUSC TCGA-77-8144-01A 6 8 In-Frame Intra-chr q21.3 q21.11 Seq+ 72543 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A13-SH2D3C SLC25A13 chr7 95813589 - SH2D3C chr9 130504238 - Exonic hg19 PCPG TCGA-QT-A5XO-01A 7 2 Out-of-frame Inter-chr q21.3 q34.11 Seq+ 72544 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A13-STK31 SLC25A13 chr7 95906508 - STK31 chr7 23792336 + Exonic hg19 BRCA TCGA-A8-A08R-01A 7 3 Out-of-frame Intra-chr q21.3 p15.3 Seq+ 72545 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A14-BCORL1 SLC25A14 chrX 129484705 - BCORL1 chrX 129184692 + Exonic hg19 UCEC TCGA-PG-A915-01A 12 6 Out-of-frame Intra-chr q26.1 q26.1 Tumor suppressor gene Seq+ 72546 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A16-DRGX SLC25A16 chr10 70248224 - DRGX chr10 50574426 - Exonic hg19 SKCM TCGA-W3-AA1V-06B 18 16 Out-of-frame Intra-chr q21.3 q11.23 Transcription factor Seq+ 72547 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A16-NDUFA9 SLC25A16 chr10 70246901 - NDUFA9 chr12 4791371 + Exonic hg19 LUSC TCGA-94-A4VJ-01A 7 3 In-Frame Inter-chr q21.3 p13.32 Seq+ 72548 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A17-EPN3 SLC25A17 chr22 41215199 - EPN3 chr17 48616245 + Exonic hg19 KIRC TCGA-BP-5186-01A 2 2 In-Frame Inter-chr q13.2 q21.33 Seq+ 72549 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A17-RBFOX2 SLC25A17 chr22 41188529 - RBFOX2 chr22 36206051 - Exonic hg19 BLCA TCGA-BT-A20V-01A 2 1 Out-of-frame Intra-chr q13.2 72550 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A21-MIPOL1 SLC25A21 chr14 37194775 - MIPOL1 chr14 37892060 + Exonic hg19 LUAD TCGA-78-7161-01A 3 2 In-Frame Intra-chr q13.3 q13.3 72551 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A21-MIPOL1 SLC25A21 chr14 37641486 - MIPOL1 chr14 37681435 + Exonic hg19 BLCA TCGA-C4-A0F7-01A 13 1 CDS-5'UTR Intra-chr q13.3 q13.3 72552 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A21-RP11-944C7.1 SLC25A21 chr14 37641486 - RP11-944C7.1 chr14 90095480 - Exonic hg19 SKCM TCGA-WE-A8ZX-06A 9 2 Out-of-frame Intra-chr q13.3 72553 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A24-DHRS12 SLC25A24 chr1 108724563 - DHRS12 chr13 52373803 - Exonic hg19 BRCA TCGA-AR-A2LL-01A 18 22 CDS-5'UTR Inter-chr q14.3 Seq+ 72554 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A25-ADAMTSL3 SLC25A25 chr9 130830859 - ADAMTSL3 chr15 84690162 + Exonic hg19 SARC TCGA-DX-A8BS-01A 3 4 Out-of-frame Inter-chr q34.11 q25.2 72555 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A25-CIZ1 SLC25A25 chr9 130830859 - CIZ1 chr9 130932386 - Exonic hg19 OV TCGA-24-2293-01A 3 7 Out-of-frame Intra-chr q34.11 q34.11 Tumor suppressor gene Seq+ 72556 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A25-TCEB3 SLC25A25 chr9 130830859 - TCEB3 chr1 24075511 + Exonic hg19 UCEC TCGA-PG-A7D5-01A 2 1 In-Frame Inter-chr q34.11 Tumor suppressor gene 72557 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A26-FAM19A1 SLC25A26 chr3 66396832 - FAM19A1 chr3 68587907 + Exonic hg19 KIRC TCGA-B8-4143-01A 5 2 Out-of-frame Intra-chr p14.1 Seq+ 72558 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A26-IMMT SLC25A26 chr3 66313803 - IMMT chr2 86374956 - Exonic hg19 GBM TCGA-41-4097-01A 5 20 In-Frame Inter-chr p11.2 Seq+ 72559 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A3-DDX27 SLC25A3 chr12 98995485 - DDX27 chr20 47849303 + Exonic hg19 SKCM TCGA-BF-A1Q0-01A 2 45 Out-of-frame Inter-chr q23.1 q13.13 72560 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A3-SIAE SLC25A3 chr12 98995485 - SIAE chr11 124543777 - Exonic hg19 KIRC TCGA-A3-3317-01A 2 5 3'UTR-5'UTR Inter-chr q23.1 q24.2 72561 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A30-CCDC107 SLC25A30 chr13 45985497 - CCDC107 chr9 35658573 + Exonic hg19 LIHC TCGA-DD-A115-01A 4 10 In-Frame Inter-chr q14.13 p13.3 Seq+ 72562 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A32-SMYD3 SLC25A32 chr8 104419862 - SMYD3 chr1 246518396 - Exonic hg19 OV TCGA-29-1770-01A 2 38 In-Frame Inter-chr q22.3 q44 Transcription factor Seq+ 72563 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A32-SMYD3 SLC25A32 chr8 104419862 - SMYD3 chr1 246518396 - Exonic hg19 OV TCGA-29-1770-02A 2 25 In-Frame Inter-chr q22.3 q44 Transcription factor Seq+ 72564 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A36-CLSTN2 SLC25A36 chr3 140682069 - CLSTN2 chr3 139894793 + Exonic hg19 SKCM TCGA-EE-A3J7-06A 56 41 In-Frame Intra-chr q23 q23 Seq+ 72565 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A36-PEX5L SLC25A36 chr3 140660937 - PEX5L chr3 179533792 - Exonic hg19 LUSC TCGA-85-6175-01A 22 10 Out-of-frame Intra-chr q23 q26.33 Seq+ 72566 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A39-C17orf57 SLC25A39 chr17 42398426 - C17orf57 chr17 45438744 + Exonic hg19 PRAD TCGA-G9-6494-01A 28 14 In-Frame Intra-chr q21.31 72567 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A40-ADAM22 SLC25A40 chr7 87476264 - ADAM22 chr7 87822431 + Exonic hg19 PRAD TCGA-XK-AAJA-01A 4 4 Out-of-frame Intra-chr q21.12 q21.12 Seq+ 72568 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A42-SMARCA4 SLC25A42 chr19 19174924 - SMARCA4 chr19 11123625 + Exonic hg19 SKCM TCGA-ER-A19H-06A 2 4 5'UTR-CDS Intra-chr p13.11 p13.2 Oncogene Tumor suppressor gene Seq+ 72569 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A44-PALM2-AKAP2 SLC25A44 chr1 156164038 - PALM2-AKAP2 chr9 112918599 + Exonic hg19 LIHC TCGA-BC-A8YO-01A 48 11 Out-of-frame Inter-chr q22 q31.3 72570 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A44-RAB33A SLC25A44 chr1 156164038 - RAB33A chrX 129318259 + Exonic hg19 UCEC TCGA-AX-A2H4-01A 4 3 5'UTR-CDS Inter-chr q22 q26.1 72571 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A44-SEMA4A SLC25A44 chr1 156164038 - SEMA4A chr1 156142617 + Exonic hg19 UCEC TCGA-B5-A0JN-01A 6 3 5'UTR-CDS Intra-chr q22 q22 Seq+ 72572 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC25A44-SEMA4A SLC25A44 chr1 156164038 - SEMA4A chr1 156142617 + Exonic hg19 LUSC TCGA-O2-A52Q-01A 32 9 5'UTR-CDS Intra-chr q22 q22 Seq+ 72573 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC26A11-OAF SLC26A11 chr17 78211393 - OAF chr11 120099577 + Exonic hg19 HNSC TCGA-CV-5443-01A 10 2 In-Frame Inter-chr q25.3 q23.3 Seq+ 72574 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC26A6-CYP2C8 SLC26A6 chr3 48672804 - CYP2C8 chr10 96798795 - Exonic hg19 UCEC TCGA-AJ-A3IA-01A 16 11 Out-of-frame Inter-chr p21.31 q23.33 Seq+ 72575 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC27A1-KIAA0391 SLC27A1 chr19 17599926 - KIAA0391 chr14 35735933 + Exonic hg19 UCS TCGA-NF-A4WX-01A 27 9 In-Frame Inter-chr p13.11 q13.2 Seq+ 72576 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC27A1-SUV420H2 SLC27A1 chr19 17581516 - SUV420H2 chr19 55857581 + Exonic hg19 SKCM TCGA-D3-A3CC-06A 7 2 Out-of-frame Intra-chr p13.11 72577 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC29A1-DSP SLC29A1 chr6 44201878 - DSP chr6 7575528 + Exonic hg19 BRCA TCGA-E2-A1LI-01A 2 1 3'UTR-CDS Intra-chr p21.1 p24.3 Tumor suppressor gene 72578 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC29A2-RAB6A SLC29A2 chr11 66133407 - RAB6A chr11 73390765 - Exonic hg19 CHOL TCGA-W5-AA2X-01A 39 48 In-Frame Intra-chr q13.2 q13.4 Seq+ 72579 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC2A1-GRHL3 SLC2A1 chr1 43424305 - GRHL3 chr1 24657916 + Exonic hg19 BRCA TCGA-D8-A1XT-01A 11 6 Out-of-frame Intra-chr p34.2 p36.11 Transcription factor Seq+ 72580 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC2A10-ACSS2 SLC2A10 chr20 45338379 - ACSS2 chr20 33500899 + Exonic hg19 LUSC TCGA-85-8664-01A 11 7 Out-of-frame Intra-chr q13.12 q11.22 Seq+ 72581 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC2A12-SGK1 SLC2A12 chr6 134373516 - SGK1 chr6 134583286 - Exonic hg19 HNSC TCGA-BA-4078-01A 33 19 Out-of-frame Intra-chr q23.2 q23.2 AGC:SGK Oncogene Seq+ 72582 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC2A12-SGK1 SLC2A12 chr6 134349519 - SGK1 chr6 134583286 - Exonic hg19 UCEC TCGA-BK-A139-01A 3 11 Out-of-frame Intra-chr q23.2 q23.2 AGC:SGK Oncogene Seq+ 72583 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC2A13-ARHGDIB SLC2A13 chr12 40422103 - ARHGDIB chr12 15100883 - Exonic hg19 SARC TCGA-DX-A240-01A 57 55 In-Frame Intra-chr q12 p12.3 Seq+ 72584 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC2A13-FAM186A SLC2A13 chr12 40499055 - FAM186A chr12 50727886 - Exonic hg19 SKCM TCGA-WE-A8ZX-06A 7 3 Out-of-frame Intra-chr q12 q13.12 Seq+ 72585 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC2A13-HSD17B6 SLC2A13 chr12 40499055 - HSD17B6 chr12 57167618 + Exonic hg19 SARC TCGA-DX-A240-01A 2 2 CDS-5'UTR Intra-chr q12 q13.3 Seq+ 72586 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC2A13-RAB3IP SLC2A13 chr12 40223905 - RAB3IP chr12 70209144 + Exonic hg19 LUAD TCGA-49-4501-01A 11 6 Out-of-frame Intra-chr q12 q15 Seq+ 72587 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC2A13-RP11-478C19.2 SLC2A13 chr12 40345059 - RP11-478C19.2 chr12 110834257 - Exonic hg19 GBM TCGA-06-0129-01A 5 11 Out-of-frame Intra-chr q12 72588 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC2A13-TERT SLC2A13 chr12 40345059 - TERT chr5 1282739 - Exonic hg19 KIRC TCGA-CJ-5680-01A 2 2 Out-of-frame Inter-chr q12 p15.33 Oncogene Seq+ 72589 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC2A13-ZNF329 SLC2A13 chr12 40422103 - ZNF329 chr19 58654028 - Exonic hg19 BLCA TCGA-CU-A0YN-01A 2 1 CDS-5'UTR Inter-chr q12 q13.43 Transcription factor Seq+ 72590 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC2A8-GARNL3 SLC2A8 chr9 130167270 - GARNL3 chr9 130151183 + Exonic hg19 OV TCGA-25-1630-01A 3 6 In-Frame Intra-chr q33.3 q33.3 Seq+ 72591 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC2A8-GARNL3 SLC2A8 chr9 130162285 - GARNL3 chr9 130116125 + Exonic hg19 HNSC TCGA-CR-6478-01A 2 2 In-Frame Intra-chr q33.3 q33.3 Seq+ 72592 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC2A9-CCDC84 SLC2A9 chr4 9982216 - CCDC84 chr11 118869140 + Exonic hg19 CESC TCGA-VS-A8QF-01A 5 5 In-Frame Inter-chr p16.1 72593 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC2A9-RAD51 SLC2A9 chr4 10020599 - RAD51 chr15 40998375 + Exonic hg19 BLCA TCGA-DK-A3X1-01A 5 4 In-Frame Inter-chr p16.1 q15.1 Seq+ 72594 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC30A10-MEX3A SLC30A10 chr1 220100370 - MEX3A chr1 156047473 - Exonic hg19 LIHC TCGA-CC-A1HT-01A 2 2 In-Frame Intra-chr q41 q22 Seq+ 72595 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC30A4-PDE2A SLC30A4 chr15 45803336 - PDE2A chr11 72342183 - Exonic hg19 PRAD TCGA-CH-5765-01A 6 4 In-Frame Inter-chr q21.1 q13.4 Seq+ 72596 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC30A4-RP11-744N12.3 SLC30A4 chr15 45814162 - RP11-744N12.3 chr11 128552354 - Exonic hg19 PRAD TCGA-CH-5738-01A 6 2 Out-of-frame Inter-chr q21.1 72597 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC30A6-ACTR2 SLC30A6 chr2 32399216 - ACTR2 chr2 65492177 + Exonic hg19 PRAD TCGA-EJ-7312-01B 4 4 Out-of-frame Intra-chr p22.3 p14 TKL:STKR Seq+ 72598 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC30A6-BRE SLC30A6 chr2 32400430 - BRE chr2 28460069 + Exonic hg19 OV TCGA-57-1583-01A 14 21 In-Frame Intra-chr p22.3 Seq+ 72599 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC30A7-CMTM8 SLC30A7 chr1 101362227 - CMTM8 chr3 32409364 + Exonic hg19 PRAD TCGA-HC-8259-01A 19 6 Out-of-frame Inter-chr p21.2 p22.3 Seq+ 72600 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC30A7-HHIPL2 SLC30A7 chr1 101379362 - HHIPL2 chr1 222705453 - Exonic hg19 BRCA TCGA-EW-A1OV-01A 2 3 Out-of-frame Intra-chr p21.2 q41 Seq+ 72601 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC30A9-SLC2A9 SLC30A9 chr4 42003797 - SLC2A9 chr4 9909969 - Exonic hg19 BRCA TCGA-A8-A09M-01A 5 8 Out-of-frame Intra-chr p13 p16.1 72602 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC34A2-CLDN7 SLC34A2 chr4 25680370 - CLDN7 chr17 7166264 - Exonic hg19 THCA TCGA-FE-A231-01A 2 1 3'UTR-5'UTR Inter-chr p15.2 p13.1 72603 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC34A2-CLDN7 SLC34A2 chr4 25680370 - CLDN7 chr17 7166264 - Exonic hg19 THCA TCGA-IM-A3U3-01A 2 2 3'UTR-5'UTR Inter-chr p15.2 p13.1 72604 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC34A2-EEA1 SLC34A2 chr4 25680370 - EEA1 chr12 93229203 - Exonic hg19 LUAD TCGA-55-7727-01A 2 2 Out-of-frame Inter-chr p15.2 q22 Transcription factor 72605 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC34A2-NDUFV1 SLC34A2 chr4 25680370 - NDUFV1 chr11 67375697 + Exonic hg19 LUAD TCGA-05-4405-01A 2 1 Out-of-frame Inter-chr p15.2 q13.2 72606 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC35A1-LRRFIP1 SLC35A1 chr6 88211028 - LRRFIP1 chr2 238617187 + Exonic hg19 SARC TCGA-DX-A8BU-01A 2 3 In-Frame Inter-chr q15 q37.3 72607 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC35A3-C1orf194 SLC35A3 chr1 100436200 - C1orf194 chr1 109649281 - Exonic hg19 LUSC TCGA-NC-A5HR-01A 23 6 5'UTR-CDS Intra-chr p21.2 p13.3 Seq+ 72608 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC35A4-MTSS1 SLC35A4 chr5 139945556 - MTSS1 chr8 125603476 - Exonic hg19 MESO TCGA-TS-A7P0-01A 4 10 5'UTR-CDS Inter-chr q31.3 q24.13 Tumor suppressor gene Seq+ 72609 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC35A4-PEX1 SLC35A4 chr5 139948680 - PEX1 chr7 92146729 - Exonic hg19 KIRP TCGA-BQ-5892-01A 2 1 Out-of-frame Inter-chr q31.3 q21.2 72610 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC35B1-IGFBP4 SLC35B1 chr17 47784327 - IGFBP4 chr17 38609237 + Exonic hg19 BRCA TCGA-A2-A04W-01A 80 44 In-Frame Intra-chr q21.33 q21.2 Tumor suppressor gene Seq+ 72611 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC35B3-GSTA5 SLC35B3 chr6 8428170 - GSTA5 chr6 52699080 - Exonic hg19 LGG TCGA-TQ-A7RK-02B 4 5 In-Frame Intra-chr p24.3 p12.2 Seq+ 72612 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC35D1-PRKAR2B SLC35D1 chr1 67515465 - PRKAR2B chr7 106762397 + Exonic hg19 KIRC TCGA-B0-4945-01A 3 1 Out-of-frame Inter-chr p31.3 Seq+ 72613 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC35E2B-PFKFB4 SLC35E2B chr1 1601103 - PFKFB4 chr3 48563102 - Exonic hg19 BLCA TCGA-GU-A764-01A 4 2 In-Frame Inter-chr p36.33 p21.31 Seq+ 72614 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC35E3-L3MBTL3 SLC35E3 chr12 69145970 - L3MBTL3 chr6 130454597 + Exonic hg19 SARC TCGA-3B-A9HS-01A 23 13 Out-of-frame Inter-chr q15 q23.1 Transcription factor Seq+ 72615 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC35E3-OS9 SLC35E3 chr12 69145970 - OS9 chr12 58109543 + Exonic hg19 GBM TCGA-06-0138-01A 27 42 In-Frame Intra-chr q15 q13.3 Seq+ 72616 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC35E4-SEC14L2 SLC35E4 chr22 31033056 - SEC14L2 chr22 30802331 + Exonic hg19 LUAD TCGA-49-AARE-01A 4 3 In-Frame Intra-chr q12.2 q12.2 Tumor suppressor gene Seq+ 72617 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC35F2-AMPD3 SLC35F2 chr11 107673727 - AMPD3 chr11 10483062 + Exonic hg19 PAAD TCGA-IB-7652-01A 4 2 Out-of-frame Intra-chr q22.3 p15.4 Seq+ 72618 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC35F2-PIWIL4 SLC35F2 chr11 107729384 - PIWIL4 chr11 94340605 + Exonic hg19 SKCM TCGA-D9-A4Z3-01A 4 1 Out-of-frame Intra-chr q22.3 q21 Seq+ 72619 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC35F3-KLHL1 SLC35F3 chr1 234367487 - KLHL1 chr13 70371094 - Exonic hg19 SARC TCGA-PC-A5DK-01A 10 2 Out-of-frame Inter-chr q42.2 q21.33 72620 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC35G6-ALOX12 SLC35G6 chr17 7388176 - ALOX12 chr17 6903655 + Exonic hg19 BRCA TCGA-A2-A1G1-01A 73 6 3'UTR-CDS Intra-chr p13.1 72621 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC35G6-FBN3 SLC35G6 chr17 7388176 - FBN3 chr19 8156474 - Exonic hg19 LAML TCGA-AB-2938-03A 15 24 3'UTR-CDS Inter-chr p13.2 72622 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC35G6-SLC16A13 SLC35G6 chr17 7399392 - SLC16A13 chr17 6941471 + Exonic hg19 BRCA TCGA-A8-A07O-01A 26 21 3'UTR-CDS Intra-chr p13.1 72623 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC36A1-TTC37 SLC36A1 chr5 150859050 - TTC37 chr5 94803693 - Exonic hg19 KIRC TCGA-B8-4143-01A 3 1 Out-of-frame Intra-chr q33.1 q15 Seq+ 72624 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC37A1-MTA1 SLC37A1 chr21 43988548 - MTA1 chr14 105932763 + Exonic hg19 PRAD TCGA-EJ-5504-01A 2 1 In-Frame Inter-chr q22.3 q32.33 72625 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC37A1-NT5C3 SLC37A1 chr21 43974252 - NT5C3 chr7 33059336 - Exonic hg19 BRCA TCGA-A2-A0CW-01A 8 4 Out-of-frame Inter-chr q22.3 Seq+ 72626 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC37A1-PCNT SLC37A1 chr21 43987168 - PCNT chr21 47831103 + Exonic hg19 BRCA TCGA-A2-A3XY-01A 14 14 In-Frame Intra-chr q22.3 q22.3 Seq+ 72627 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC37A1-PCP4 SLC37A1 chr21 43988548 - PCP4 chr21 41300909 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 26 15 In-Frame Intra-chr q22.3 q22.2 Seq+ 72628 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC37A3-FLYWCH2 SLC37A3 chr7 140043212 - FLYWCH2 chr16 2945221 + Exonic hg19 PRAD TCGA-EJ-A7NN-01A 20 17 CDS-5'UTR Inter-chr q34 p13.3 Seq+ 72629 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC38A1-GTSE1 SLC38A1 chr12 46662648 - GTSE1 chr22 46719087 + Exonic hg19 UCEC TCGA-AX-A3G3-01A 36 24 5'UTR-CDS Inter-chr q13.11 q13.31 Seq+ 72630 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC38A1-PCTP SLC38A1 chr12 46662309 - PCTP chr17 53844696 + Exonic hg19 HNSC TCGA-CQ-A4C9-01A 3 2 5'UTR-5'UTR Inter-chr q13.11 q22 72631 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC38A1-UNKL SLC38A1 chr12 46622936 - UNKL chr16 1453345 - Exonic hg19 LIHC TCGA-ED-A82E-01A 14 8 In-Frame Inter-chr q13.11 p13.3 Seq+ 72632 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC38A10-C17orf101 SLC38A10 chr17 79244718 - C17orf101 chr17 80356195 - Exonic hg19 UCEC TCGA-BG-A3PP-01A 18 21 In-Frame Intra-chr q25.3 Seq+ 72633 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC38A10-C17orf101 SLC38A10 chr17 79225293 - C17orf101 chr17 80369406 - Exonic hg19 STAD TCGA-MX-A663-01A 4 12 In-Frame Intra-chr q25.3 Seq+ 72634 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC38A10-KIAA0748 SLC38A10 chr17 79268623 - KIAA0748 chr12 55359935 - Exonic hg19 LUAD TCGA-49-AAR9-01A 7 10 Out-of-frame Inter-chr q25.3 72635 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC38A10-NPLOC4 SLC38A10 chr17 79225293 - NPLOC4 chr17 79539114 - Exonic hg19 STAD TCGA-BR-8060-01A 13 24 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 72636 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC38A10-NPLOC4 SLC38A10 chr17 79263491 - NPLOC4 chr17 79589304 - Exonic hg19 SKCM TCGA-ER-A19W-06A 7 5 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 72637 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC38A10-TMEM207 SLC38A10 chr17 79244718 - TMEM207 chr3 190147520 - Exonic hg19 SARC TCGA-DX-A1L2-01A 25 11 Out-of-frame Inter-chr q25.3 q28 Seq+ 72638 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC38A11-RABGAP1L SLC38A11 chr2 165765150 - RABGAP1L chr1 174926594 + Exonic hg19 BRCA TCGA-A2-A25B-01A 3 3 In-Frame Inter-chr q24.3 q25.1 Seq+ 72639 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC38A2-RAB3IP SLC38A2 chr12 46766292 - RAB3IP chr12 70178500 + Exonic hg19 SARC TCGA-DX-A7EI-01A 38 54 5'UTR-5'UTR Intra-chr q13.11 q15 Seq+ 72640 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC38A9-KCNIP1 SLC38A9 chr5 54945035 - KCNIP1 chr5 170159804 + Exonic hg19 LUAD TCGA-MN-A4N5-01A 10 4 Out-of-frame Intra-chr q11.2 q35.1 Seq+ 72641 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A11-ADSS SLC39A11 chr17 71080947 - ADSS chr1 244601070 - Exonic hg19 BLCA TCGA-4Z-AA7M-01A 21 38 CDS-5'UTR Inter-chr q25.1 q44 Seq+ 72642 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A11-C17orf80 SLC39A11 chr17 71084796 - C17orf80 chr17 71231615 + Exonic hg19 BRCA TCGA-AC-A5XU-01A 4 1 CDS-5'UTR Intra-chr q25.1 q25.1 72643 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A11-CA11 SLC39A11 chr17 71080947 - CA11 chr19 49143537 - Exonic hg19 UCS TCGA-N8-A56S-01A 15 13 In-Frame Inter-chr q25.1 q13.33 Tumor suppressor gene Seq+ 72644 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A11-CD69 SLC39A11 chr17 70943891 - CD69 chr12 9909015 - Exonic hg19 BRCA TCGA-AO-A124-01A 6 2 In-Frame Inter-chr q25.1 p13.31 72645 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A11-FAM104A SLC39A11 chr17 70943870 - FAM104A chr17 71223403 - Exonic hg19 SKCM TCGA-WE-A8K6-06A 6 3 Out-of-frame Intra-chr q25.1 q25.1 72646 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A11-OPN3 SLC39A11 chr17 71027695 - OPN3 chr1 241761299 - Exonic hg19 PRAD TCGA-KC-A7F5-01A 3 1 In-Frame Inter-chr q25.1 q43 Seq+ 72647 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A11-PITPNC1 SLC39A11 chr17 70845773 - PITPNC1 chr17 65528918 + Exonic hg19 BRCA TCGA-A2-A0YE-01A 14 8 Out-of-frame Intra-chr q25.1 q24.2 Seq+ 72648 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A11-RPTOR SLC39A11 chr17 71027695 - RPTOR chr17 78681641 + Exonic hg19 COAD TCGA-AY-A8YK-01A 14 11 In-Frame Intra-chr q25.1 q25.3 Seq+ 72649 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A11-SDK2 SLC39A11 chr17 71027695 - SDK2 chr17 71364732 - Exonic hg19 BRCA TCGA-AO-A129-01A 10 11 In-Frame Intra-chr q25.1 q25.1 Seq+ 72650 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A11-SDK2 SLC39A11 chr17 71084796 - SDK2 chr17 71335079 - Exonic hg19 BRCA TCGA-D8-A27M-01A 39 26 In-Frame Intra-chr q25.1 q25.1 Seq+ 72651 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A11-SDK2 SLC39A11 chr17 71080947 - SDK2 chr17 71364732 - Exonic hg19 PAAD TCGA-F2-6879-01A 17 7 In-Frame Intra-chr q25.1 q25.1 Seq+ 72652 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A11-SLC6A4 SLC39A11 chr17 70943891 - SLC6A4 chr17 28538442 - Exonic hg19 PCPG TCGA-SR-A6MP-01A 41 16 CDS-3'UTR Intra-chr q25.1 q11.2 Seq+ 72653 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A14-FAM110B SLC39A14 chr8 22237027 - FAM110B chr8 59058466 + Exonic hg19 LIHC TCGA-BC-A10T-01A 20 27 5'UTR-5'UTR Intra-chr p21.3 q12.1 Seq+ 72654 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A14-IL4I1 SLC39A14 chr8 22224921 - IL4I1 chr19 50399310 - Exonic hg19 SARC TCGA-KF-A41W-01A 8 10 5'UTR-CDS Inter-chr p21.3 q13.33 Seq+ 72655 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A14-PIWIL2 SLC39A14 chr8 22224921 - PIWIL2 chr8 22136854 + Exonic hg19 STAD TCGA-BR-4357-01A 6 3 5'UTR-5'UTR Intra-chr p21.3 p21.3 Tumor suppressor gene 72656 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A14-PIWIL2 SLC39A14 chr8 22269719 - PIWIL2 chr8 22161534 + Exonic hg19 LUSC TCGA-NC-A5HL-01A 6 1 Out-of-frame Intra-chr p21.3 p21.3 Tumor suppressor gene 72657 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A14-PRKDC SLC39A14 chr8 22224921 - PRKDC chr8 48762064 - Exonic hg19 BRCA TCGA-D8-A1X5-01A 3 5 5'UTR-CDS Intra-chr p21.3 q11.21 Oncogene Seq+ 72658 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A14-XPO7 SLC39A14 chr8 22224921 - XPO7 chr8 21856266 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 15 22 5'UTR-CDS Intra-chr p21.3 p21.3 Seq+ 72659 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A3-DDX39A SLC39A3 chr19 2737046 - DDX39A chr19 14522410 - Exonic hg19 SKCM TCGA-DA-A1I0-06A 17 22 In-Frame Intra-chr p13.3 p13.12 Seq+ 72660 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A3-PPAP2C SLC39A3 chr19 2737046 - PPAP2C chr19 288171 - Exonic hg19 BRCA TCGA-A7-A13E-01A 86 35 Out-of-frame Intra-chr p13.3 Seq+ 72661 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A3-SGTA SLC39A3 chr19 2737046 - SGTA chr19 2765283 - Exonic hg19 GBM TCGA-06-0125-01A 10 26 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 72662 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A3-SGTA SLC39A3 chr19 2737046 - SGTA chr19 2765283 - Exonic hg19 GBM TCGA-06-0125-02A 5 15 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 72663 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A5-KRT84 SLC39A5 chr12 56626656 - KRT84 chr12 52774367 - Exonic hg19 UCEC TCGA-AX-A3FW-01A 4 3 In-Frame Intra-chr q13.3 q13.13 Seq+ 72664 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A6-MAST2 SLC39A6 chr18 33694060 - MAST2 chr1 46485268 + Exonic hg19 HNSC TCGA-CV-7235-01A 26 29 Out-of-frame Inter-chr q12.2 p34.1 AGC:MAST Seq+ 72665 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A9-BCL2L13 SLC39A9 chr14 69908983 - BCL2L13 chr22 18138428 + Exonic hg19 GBM TCGA-06-1804-01A 3 10 CDS-5'UTR Inter-chr q24.1 q11.21 Seq+ 72666 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A9-RAD51B SLC39A9 chr14 69866182 - RAD51B chr14 69077723 + Exonic hg19 BRCA TCGA-D8-A1XQ-01A 11 4 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 72667 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A9-SEC23IP SLC39A9 chr14 69866182 - SEC23IP chr10 121689119 + Exonic hg19 OV TCGA-30-1860-01A 2 4 In-Frame Inter-chr q24.1 q26.11 Seq+ 72668 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC39A9-USP15 SLC39A9 chr14 69890919 - USP15 chr12 62783211 + Exonic hg19 BRCA TCGA-AN-A0AS-01A 4 12 Out-of-frame Inter-chr q24.1 q14.1 Seq+ 72669 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC3A2-ASRGL1 SLC3A2 chr11 62623853 - ASRGL1 chr11 62156605 + Exonic hg19 UCS TCGA-N8-A4PI-01A 12 8 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 72670 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC3A2-GRAP2 SLC3A2 chr11 62653080 - GRAP2 chr22 40365415 + Exonic hg19 SKCM TCGA-FS-A1ZK-06A 76 44 In-Frame Inter-chr q12.3 q13.1 Seq+ 72671 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC3A2-NXF1 SLC3A2 chr11 62623853 - NXF1 chr11 62562479 - Exonic hg19 BRCA TCGA-AO-A1KR-01A 15 10 In-Frame Intra-chr q12.3 q12.3 Seq+ 72672 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC3A2-POLR2G SLC3A2 chr11 62639141 - POLR2G chr11 62532654 + Exonic hg19 HNSC TCGA-CV-6441-01A 29 21 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 72673 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC40A1-TYK2 SLC40A1 chr2 190425318 - TYK2 chr19 10491352 - Exonic hg19 PRAD TCGA-J4-8198-01A 2 6 Out-of-frame Inter-chr q32.2 p13.2 TK:JakA 72674 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC41A1-C1orf159 SLC41A1 chr1 205779198 - C1orf159 chr1 1027483 - Exonic hg19 ESCA TCGA-L5-A8NI-01A 2 2 CDS-5'UTR Intra-chr q32.1 p36.33 72675 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC41A2-ANAPC7 SLC41A2 chr12 105280071 - ANAPC7 chr12 110825697 - Exonic hg19 PRAD TCGA-G9-7521-01A 2 2 In-Frame Intra-chr q23.3 q24.11 Seq+ 72676 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC41A2-DNM3 SLC41A2 chr12 105280071 - DNM3 chr1 172100315 + Exonic hg19 SARC TCGA-DX-A48N-01A 51 24 Out-of-frame Inter-chr q23.3 q24.3 Seq+ 72677 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC41A2-LIN7A SLC41A2 chr12 105351866 - LIN7A chr12 81242101 - Exonic hg19 SARC TCGA-3B-A9HO-01A 77 34 5'UTR-CDS Intra-chr q23.3 q21.31 Seq+ 72678 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC41A3-ALDH1L1 SLC41A3 chr3 125786790 - ALDH1L1 chr3 125879845 - Exonic hg19 PRAD TCGA-V1-A8MM-01A 3 2 CDS-5'UTR Intra-chr q21.3 q21.3 72679 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC43A2-SCARF1 SLC43A2 chr17 1486498 - SCARF1 chr17 1538911 - Exonic hg19 BRCA TCGA-B6-A0X1-01A 5 2 In-Frame Intra-chr p13.3 Seq+ 72680 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC43A2-SMG6 SLC43A2 chr17 1516489 - SMG6 chr17 2187029 - Exonic hg19 BRCA TCGA-A8-A06Z-01A 14 17 In-Frame Intra-chr p13.3 Seq+ 72681 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC43A2-SMYD4 SLC43A2 chr17 1516489 - SMYD4 chr17 1686770 - Exonic hg19 UCEC TCGA-B5-A5OD-01A 2 3 Out-of-frame Intra-chr p13.3 Tumor suppressor gene Seq+ 72682 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC44A1-NIPSNAP3A SLC44A1 chr9 108007185 - NIPSNAP3A chr9 107513237 + Exonic hg19 OV TCGA-25-1326-01A 2 4 In-Frame Intra-chr q31.1 q31.1 Seq+ 72683 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC44A1-PALM2-AKAP2 SLC44A1 chr9 108007185 - PALM2-AKAP2 chr9 112898407 + Exonic hg19 SARC TCGA-SI-A71Q-01A 2 1 Out-of-frame Intra-chr q31.1 q31.3 72684 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC44A2-PTPRQ SLC44A2 chr19 10713237 - PTPRQ chr12 80981908 + Exonic hg19 SARC TCGA-FX-A3NK-01A 8 8 In-Frame Inter-chr p13.2 q21.31 Seq+ 72685 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC44A3-ABCD3 SLC44A3 chr1 95332973 - ABCD3 chr1 94940699 + Exonic hg19 LUSC TCGA-37-A5EN-01A 2 1 In-Frame Intra-chr p21.3 p21.3 72686 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC44A4-OGT SLC44A4 chr6 31830969 - OGT chrX 70782980 + Exonic hg19 PRAD TCGA-KC-A7F5-01A 2 9 3'UTR-CDS Inter-chr q13.1 72687 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A2-AMACR SLC45A2 chr5 33982341 - AMACR chr5 34006004 - Exonic hg19 BLCA TCGA-BL-A0C8-01B 2 1 In-Frame Intra-chr p13.2 p13.2 KB Pub Seq+ 72688 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A2-C1QTNF3 SLC45A2 chr5 33982341 - C1QTNF3 chr5 34035863 - Exonic hg19 ESCA TCGA-L5-A4OQ-01A 2 4 Out-of-frame Intra-chr p13.2 p13.2 72689 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A2-CCDC125 SLC45A2 chr5 33982341 - CCDC125 chr5 68581294 - Exonic hg19 PRAD TCGA-ZG-A9L4-01A 10 10 In-Frame Intra-chr p13.2 Seq+ 72690 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-AP1G2 SLC45A3 chr1 205626979 - AP1G2 chr14 24037279 - Exonic hg19 PRAD TCGA-CH-5768-01A 2 17 3'UTR-5'UTR Inter-chr q32.1 q11.2 72691 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649522 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-EJ-A7NG-01A 8 1 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 72692 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649522 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-G9-6351-01A 119 67 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 72693 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649522 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-G9-7522-01A 166 116 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 72694 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649522 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-HC-7748-01A 260 245 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 72695 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649522 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-HC-7752-01A 2 1 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 72696 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649522 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-HC-7820-01A 137 108 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 72697 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649522 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-HC-7821-01A 124 86 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 72698 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649522 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-HC-A6AN-01A 151 83 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 72699 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649522 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-J4-A83N-01A 155 113 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 72700 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649522 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-KK-A8I5-01A 80 70 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 72701 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649522 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-XJ-A9DQ-01A 70 24 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 72702 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649522 - ERG chr21 39817544 - Exonic hg19 PRAD TCGA-YL-A9WX-01A 12 4 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 72703 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649522 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-2A-A8W3-01A 622 527 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 72704 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649522 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-HC-A6AQ-01A 23 19 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 72705 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649522 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-HC-A8CY-01A 446 509 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 72706 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649522 - ETV1 chr7 14017105 - Exonic hg19 PRAD TCGA-J4-A83M-01A 314 301 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 72707 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649522 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-KK-A7AP-01A 481 437 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 72708 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649522 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-M7-A71Y-01A 101 66 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 72709 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-FN1 SLC45A3 chr1 205626979 - FN1 chr2 216274837 - Exonic hg19 PRAD TCGA-J4-A83I-01A 2 2 3'UTR-CDS Inter-chr q32.1 q35 Oncogene 72710 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-FOXP1 SLC45A3 chr1 205626979 - FOXP1 chr3 71007472 - Exonic hg19 PRAD TCGA-HC-7212-01A 2 1 Out-of-frame Inter-chr q32.1 p13 Oncogene Tumor suppressor gene Transcription factor 72711 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-SIAE SLC45A3 chr1 205626979 - SIAE chr11 124543777 - Exonic hg19 PRAD TCGA-CH-5789-01A 2 4 3'UTR-5'UTR Inter-chr q32.1 q24.2 72712 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-SKIL SLC45A3 chr1 205649522 - SKIL chr3 170077487 + Exonic hg19 PRAD TCGA-KK-A8IL-01A 48 15 5'UTR-5'UTR Inter-chr q32.1 q26.2 Tumor suppressor gene Transcription factor Seq+ 72713 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-STAT6 SLC45A3 chr1 205626979 - STAT6 chr12 57496773 - Exonic hg19 PRAD TCGA-CH-5752-01A 2 4 Out-of-frame Inter-chr q32.1 q13.3 Transcription factor 72714 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-STAT6 SLC45A3 chr1 205626979 - STAT6 chr12 57496773 - Exonic hg19 PRAD TCGA-EJ-5497-01A 2 12 Out-of-frame Inter-chr q32.1 q13.3 Transcription factor 72715 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-STAT6 SLC45A3 chr1 205626979 - STAT6 chr12 57496773 - Exonic hg19 PRAD TCGA-HC-8258-01A 2 1 Out-of-frame Inter-chr q32.1 q13.3 Transcription factor 72716 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-ZBTB7B SLC45A3 chr1 205649522 - ZBTB7B chr1 154987131 + Exonic hg19 PRAD TCGA-FC-A5OB-01A 123 98 5'UTR-5'UTR Intra-chr q32.1 q21.3 Transcription factor Seq+ 72717 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC45A3-ZNFX1 SLC45A3 chr1 205626979 - ZNFX1 chr20 47863418 - Exonic hg19 PRAD TCGA-HC-8260-01A 2 9 Out-of-frame Inter-chr q32.1 q13.13 72718 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC47A2-ALDH3A1 SLC47A2 chr17 19616016 - ALDH3A1 chr17 19645525 - Exonic hg19 KIRP TCGA-GL-A4EM-01A 31 23 In-Frame Intra-chr p11.2 p11.2 Seq+ 72719 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC47A2-ALDH3A1 SLC47A2 chr17 19616016 - ALDH3A1 chr17 19646776 - Exonic hg19 LGG TCGA-HT-A617-01A 40 16 In-Frame Intra-chr p11.2 p11.2 Seq+ 72720 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC47A2-FADS2 SLC47A2 chr17 19605918 - FADS2 chr11 61624483 + Exonic hg19 LUSC TCGA-21-1071-01A 4 5 In-Frame Inter-chr p11.2 q12.2 Seq+ 72721 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC47A2-SPECC1 SLC47A2 chr17 19617138 - SPECC1 chr17 20013740 + Exonic hg19 SARC TCGA-PC-A5DL-01A 4 3 Out-of-frame Intra-chr p11.2 p11.2 72722 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC47A2-ULK2 SLC47A2 chr17 19619746 - ULK2 chr17 19674380 - Exonic hg19 KIRP TCGA-BQ-5880-01A 11 5 CDS-3'UTR Intra-chr p11.2 p11.2 Other:ULK Seq+ 72723 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC4A1AP-GPN1 SLC4A1AP chr2 27892254 - GPN1 chr2 27870703 + Exonic hg19 GBM TCGA-06-0743-01A 11 23 In-Frame Intra-chr p23.3 p23.3 Seq+ 72724 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC4A4-ARHGAP6 SLC4A4 chr4 72263370 - ARHGAP6 chrX 11272827 - Exonic hg19 PRAD TCGA-M7-A725-01A 13 13 In-Frame Inter-chr q13.3 p22.2 Seq+ 72725 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC4A4-C1orf135 SLC4A4 chr4 72263370 - C1orf135 chr1 26162337 - Exonic hg19 PRAD TCGA-KK-A7AZ-01A 8 5 Out-of-frame Inter-chr q13.3 Seq+ 72726 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC4A4-EPB41L1 SLC4A4 chr4 72053118 - EPB41L1 chr20 34761686 + Exonic hg19 STAD TCGA-KB-A93J-01A 5 10 5'UTR-5'UTR Inter-chr q13.3 q11.23 72727 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC4A4-GOLGA4 SLC4A4 chr4 72413437 - GOLGA4 chr3 37396592 + Exonic hg19 PRAD TCGA-VP-A875-01A 6 6 In-Frame Inter-chr q13.3 p22.2 Seq+ 72728 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC4A4-TMPRSS11E SLC4A4 chr4 72102366 - TMPRSS11E chr4 69327539 + Exonic hg19 BLCA TCGA-DK-A1AC-01A 22 15 Out-of-frame Intra-chr q13.3 Seq+ 72729 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC4A7-TYR SLC4A7 chr3 27525558 - TYR chr11 88924370 + Exonic hg19 LGG TCGA-FG-5963-01A 4 2 5'UTR-CDS Inter-chr p24.1 q14.3 72730 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC4A7-TYR SLC4A7 chr3 27525570 - TYR chr11 88924370 + Exonic hg19 LGG TCGA-FG-5963-02A 12 1 In-Frame Inter-chr p24.1 q14.3 72731 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC4A8-MGAT4C SLC4A8 chr12 51865316 - MGAT4C chr12 86443501 - Exonic hg19 SARC TCGA-SG-A6Z7-01A 2 3 CDS-5'UTR Intra-chr q13.13 Seq+ 72732 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC5A1-YWHAH SLC5A1 chr22 32500878 - YWHAH chr22 32352126 + Exonic hg19 STAD TCGA-BR-8382-01A 2 9 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 72733 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC5A1-YWHAH SLC5A1 chr22 32446001 - YWHAH chr22 32352126 + Exonic hg19 STAD TCGA-VQ-AA6D-01A 2 26 In-Frame Intra-chr q12.3 q12.3 Seq+ 72734 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC6A15-C12orf28 SLC6A15 chr12 85306302 - C12orf28 chr12 70297424 + Exonic hg19 SARC TCGA-DX-A3LT-01A 15 10 Out-of-frame Intra-chr q21.31 72735 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC6A17-DPYD SLC6A17 chr1 110719361 - DPYD chr1 97564188 - Exonic hg19 SKCM TCGA-EB-A82C-01A 2 1 In-Frame Intra-chr p13.3 p21.3 Oncogene 72736 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC6A8-PREP SLC6A8 chrX 152954291 - PREP chr6 105845802 - Exonic hg19 SARC TCGA-DX-A1KX-01A 2 4 Out-of-frame Inter-chr q28 q21 Seq+ 72737 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC6A9-EIF2B3 SLC6A9 chr1 44496978 - EIF2B3 chr1 45363116 - Exonic hg19 LUAD TCGA-44-3917-01A 3 3 5'UTR-CDS Intra-chr p34.1 p34.1 Seq+ 72738 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC7A1-AKNA SLC7A1 chr13 30169553 - AKNA chr9 117143726 - Exonic hg19 SARC TCGA-JV-A75J-01A 11 5 5'UTR-5'UTR Inter-chr q12.3 q32 Transcription factor Seq+ 72739 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC7A1-CDX2 SLC7A1 chr13 30127898 - CDX2 chr13 28539152 - Exonic hg19 BLCA TCGA-K4-A4AC-01A 50 19 5'UTR-CDS Intra-chr q12.3 q12.2 Tumor suppressor gene Transcription factor Seq+ 72740 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC7A1-HRSP12 SLC7A1 chr13 30104675 - HRSP12 chr8 99120979 - Exonic hg19 PRAD TCGA-KK-A8ID-01A 9 19 In-Frame Inter-chr q12.3 Seq+ 72741 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC7A1-UBL3 SLC7A1 chr13 30127898 - UBL3 chr13 30351400 - Exonic hg19 HNSC TCGA-F7-A622-01A 2 4 5'UTR-CDS Intra-chr q12.3 q12.3 72742 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC7A1-USPL1 SLC7A1 chr13 30127898 - USPL1 chr13 31195901 + Exonic hg19 LGG TCGA-TM-A84B-01A 2 4 5'UTR-CDS Intra-chr q12.3 q12.3 Seq+ 72743 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC7A2-TERT SLC7A2 chr8 17359811 - TERT chr5 1282739 - Exonic hg19 LIHC TCGA-DD-A73C-01A 20 18 5'UTR-CDS Inter-chr p22 p15.33 Oncogene Seq+ 72744 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC7A6-C16orf70 SLC7A6 chr16 68300624 - C16orf70 chr16 67165189 + Exonic hg19 UCS TCGA-NA-A5I1-01A 3 7 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 72745 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC7A6-GRXCR1 SLC7A6 chr16 68300624 - GRXCR1 chr4 43022371 + Exonic hg19 LUAD TCGA-38-4629-01A 2 1 5'UTR-CDS Inter-chr q22.1 p13 72746 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC7A6-NFATC3 SLC7A6 chr16 68309152 - NFATC3 chr16 68260253 + Exonic hg19 LUAD TCGA-93-8067-01A 19 5 In-Frame Intra-chr q22.1 q22.1 Transcription factor Seq+ 72747 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC7A6-PLA2G15 SLC7A6 chr16 68300624 - PLA2G15 chr16 68288822 + Exonic hg19 UCEC TCGA-BK-A139-02A 6 1 5'UTR-CDS Intra-chr q22.1 q22.1 72748 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC7A7-ACIN1 SLC7A7 chr14 23282109 - ACIN1 chr14 23533697 - Exonic hg19 ESCA TCGA-R6-A8W5-01B 3 17 In-Frame Intra-chr q11.2 q11.2 Seq+ 72749 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC8A1-SRSF7 SLC8A1 chr2 40655613 - SRSF7 chr2 38977336 - Exonic hg19 SARC TCGA-HB-A43Z-01A 8 5 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 72750 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC9A2-C2orf55 SLC9A2 chr2 103236596 - C2orf55 chr2 99414000 - Exonic hg19 SKCM TCGA-ER-A197-06A 3 1 In-Frame Intra-chr q12.1 72751 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC9A3R1-FBXO18 SLC9A3R1 chr17 72745426 - FBXO18 chr10 5978419 + Exonic hg19 PRAD TCGA-EJ-7318-01B 22 15 In-Frame Inter-chr q25.1 Tumor suppressor gene p15.1 Seq+ 72752 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC9A3R1-RAB37 SLC9A3R1 chr17 72759659 - RAB37 chr17 72725395 + Exonic hg19 CESC TCGA-VS-A9V0-01A 7 2 Out-of-frame Intra-chr q25.1 Tumor suppressor gene q25.1 Seq+ 72753 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC9A3R1-RABEP1 SLC9A3R1 chr17 72765489 - RABEP1 chr17 5283828 + Exonic hg19 BRCA TCGA-AC-A2FM-01A 2 60 Out-of-frame Intra-chr q25.1 Tumor suppressor gene p13.2 72754 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC9A8-B4GALT5 SLC9A8 chr20 48431726 - B4GALT5 chr20 48273239 - Exonic hg19 SARC TCGA-DX-A1L0-01A 9 1 In-Frame Intra-chr q13.13 q13.13 Seq+ 72755 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC9A8-CCDC64B SLC9A8 chr20 48431726 - CCDC64B chr16 3081151 - Exonic hg19 BRCA TCGA-BH-A0H9-01A 12 13 Out-of-frame Inter-chr q13.13 Seq+ 72756 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC9A8-PTGIS SLC9A8 chr20 48439678 - PTGIS chr20 48124601 - Exonic hg19 STAD TCGA-FP-8631-01A 2 5 Out-of-frame Intra-chr q13.13 q13.13 Seq+ 72757 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC9A8-RAE1 SLC9A8 chr20 48491358 - RAE1 chr20 55949663 + Exonic hg19 BRCA TCGA-AR-A0TW-01A 6 4 Out-of-frame Intra-chr q13.13 q13.31 Seq+ 72758 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC9A8-TOM1L2 SLC9A8 chr20 48431726 - TOM1L2 chr17 17754266 - Exonic hg19 BLCA TCGA-4Z-AA7R-01A 3 2 Out-of-frame Inter-chr q13.13 p11.2 Tumor suppressor gene Seq+ 72759 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC9A9-KCNAB1 SLC9A9 chr3 143513843 - KCNAB1 chr3 156139405 + Exonic hg19 LUSC TCGA-22-4604-01A 4 4 In-Frame Intra-chr q24 q25.31 Seq+ 72760 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLC9B1-LRRK1 SLC9B1 chr4 103912800 - LRRK1 chr15 101586186 + Exonic hg19 LGG TCGA-E1-5304-01A 4 1 Out-of-frame Inter-chr q24 q26.3 TKL:LRRK 72761 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLCO2A1-RYK SLCO2A1 chr3 133748551 - RYK chr3 133907767 - Exonic hg19 LUSC TCGA-77-A5GH-01A 2 4 Out-of-frame Intra-chr q22.2 q22.2 TK:Ryk Seq+ 72762 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLCO2B1-HNF4A SLCO2B1 chr11 74870949 - HNF4A chr20 43034698 + Exonic hg19 KIRC TCGA-AS-3777-01A 6 6 5'UTR-CDS Inter-chr q13.4 q13.12 Tumor suppressor gene Transcription factor Seq+ 72763 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLCO2B1-HNF4A SLCO2B1 chr11 74862442 - HNF4A chr20 43034698 + Exonic hg19 LIHC TCGA-DD-A115-01A 17 13 In-Frame Inter-chr q13.4 q13.12 Tumor suppressor gene Transcription factor Seq+ 72764 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLCO3A1-ATPBD4 SLCO3A1 chr15 92669489 - ATPBD4 chr15 35834708 - Exonic hg19 COAD TCGA-CM-5348-01A 7 3 In-Frame Intra-chr q26.1 Seq+ 72765 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLCO3A1-BMPR2 SLCO3A1 chr15 92397318 - BMPR2 chr2 203407034 + Exonic hg19 LUSC TCGA-22-5485-01A 31 22 CDS-3'UTR Inter-chr q26.1 q33.1 TKL:STKR Tumor suppressor gene Seq+ 72766 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLCO3A1-EPHB1 SLCO3A1 chr15 92459688 - EPHB1 chr3 134959990 + Exonic hg19 HNSC TCGA-H7-A76A-01A 2 1 Out-of-frame Inter-chr q26.1 q22.2 Oncogene 72767 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLCO3A1-HDDC3 SLCO3A1 chr15 92397318 - HDDC3 chr15 91475340 - Exonic hg19 LGG TCGA-DB-5277-01A 7 6 Out-of-frame Intra-chr q26.1 q26.1 Seq+ 72768 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLCO3A1-ITGA11 SLCO3A1 chr15 92459688 - ITGA11 chr15 68643740 - Exonic hg19 SARC TCGA-DX-A1KY-01A 2 2 Out-of-frame Intra-chr q26.1 q23 72769 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLFN11-C17orf37 SLFN11 chr17 33700493 - C17orf37 chr17 37886544 - Exonic hg19 BRCA TCGA-A8-A08X-01A 82 35 Out-of-frame Intra-chr q12 72770 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLFN11-CCL14 SLFN11 chr17 33693966 - CCL14 chr17 34310924 - Exonic hg19 BLCA TCGA-UY-A9PD-01A 98 49 5'UTR-CDS Intra-chr q12 q12 Seq+ 72771 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLFN5-CDK5RAP3 SLFN5 chr17 33570162 - CDK5RAP3 chr17 46050885 + Exonic hg19 HNSC TCGA-UF-A7JD-01A 6 1 5'UTR-CDS Intra-chr q12 q21.32 Seq+ 72772 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLIT3-HSD17B4 SLIT3 chr5 168310270 - HSD17B4 chr5 118792010 + Exonic hg19 BRCA TCGA-EW-A1P0-01A 21 4 In-Frame Intra-chr q35.1 q23.1 Seq+ 72773 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLIT3-ITPR2 SLIT3 chr5 168620483 - ITPR2 chr12 26943160 - Exonic hg19 SARC TCGA-DX-A1KZ-01A 14 8 In-Frame Inter-chr q35.1 p11.23 Seq+ 72774 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLK-INA SLK chr10 105727653 - INA chr10 105046792 + Exonic hg19 PRAD TCGA-YJ-A8SW-01A 2 4 In-Frame Intra-chr q24.33 STE:STE20 q24.33 Seq+ 72775 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLK-ZFHX3 SLK chr10 105727653 - ZFHX3 chr16 72994093 - Exonic hg19 LUAD TCGA-64-5779-01A 2 1 CDS-5'UTR Inter-chr q24.33 STE:STE20 q22.3 Tumor suppressor gene Transcription factor Seq+ 72776 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLMAP-CUL4B SLMAP chr3 57743576 - CUL4B chrX 119708485 - Exonic hg19 LIHC TCGA-DD-A11C-01A 6 5 CDS-5'UTR Inter-chr p14.3 q24 Seq+ 72777 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLMAP-CYP11A1 SLMAP chr3 57743576 - CYP11A1 chr15 74640396 - Exonic hg19 UCS TCGA-N5-A4RA-01A 6 8 Out-of-frame Inter-chr p14.3 q24.1 Seq+ 72778 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLMAP-FAF1 SLMAP chr3 57894877 - FAF1 chr1 51267349 - Exonic hg19 ESCA TCGA-L5-A4OF-01A 2 14 Out-of-frame Inter-chr p14.3 p32.3 Seq+ 72779 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLMO2-PTPRT SLMO2 chr20 57617754 - PTPRT chr20 41514572 - Exonic hg19 BRCA TCGA-BH-A0H7-01A 26 8 Out-of-frame Intra-chr q13.11 Oncogene Tumor suppressor gene Seq+ 72780 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLMO2-TRAPPC10 SLMO2 chr20 57617754 - TRAPPC10 chr21 45494920 + Exonic hg19 LUAD TCGA-44-A479-01A 6 3 Out-of-frame Inter-chr q22.3 72781 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLPI-DDX27 SLPI chr20 43880880 - DDX27 chr20 47849303 + Exonic hg19 MESO TCGA-SC-AA5Z-01A 2 12 Out-of-frame Intra-chr q13.12 q13.13 72782 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLTM-ATE1 SLTM chr15 59204762 - ATE1 chr10 123503373 - Exonic hg19 BRCA TCGA-AO-A03V-01A 29 16 Out-of-frame Inter-chr q22.1 q26.13 Seq+ 72783 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLTM-UACA SLTM chr15 59204762 - UACA chr15 70991999 - Exonic hg19 BRCA TCGA-B6-A0RT-01A 18 10 In-Frame Intra-chr q22.1 q23 Seq+ 72784 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SLX4-ADAM32 SLX4 chr16 3650980 - ADAM32 chr8 39114706 + Exonic hg19 BRCA TCGA-C8-A8HP-01A 9 7 Out-of-frame Inter-chr p13.3 Tumor suppressor gene Seq+ 72785 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAD2-C10orf90 SMAD2 chr18 45394694 - C10orf90 chr10 128202508 - Exonic hg19 LUAD TCGA-97-7937-01A 21 7 In-Frame Inter-chr q21.1 Oncogene Tumor suppressor gene q26.2 Seq+ 72786 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAD2-CABLES1 SMAD2 chr18 45456732 - CABLES1 chr18 20768802 + Exonic hg19 UCEC TCGA-B5-A3FC-01A 2 1 5'UTR-5'UTR Intra-chr q21.1 Oncogene Tumor suppressor gene q11.2 Tumor suppressor gene 72787 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAD2-CD226 SMAD2 chr18 45456732 - CD226 chr18 67563281 - Exonic hg19 LUSC TCGA-21-1083-01A 15 13 5'UTR-CDS Intra-chr q21.1 Oncogene Tumor suppressor gene q22.2 Seq+ 72788 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAD2-ZBTB7C SMAD2 chr18 45456732 - ZBTB7C chr18 45864769 - Exonic hg19 BRCA TCGA-A8-A092-01A 9 9 5'UTR-5'UTR Intra-chr q21.1 Oncogene Tumor suppressor gene q21.1 Tumor suppressor gene Transcription factor 72789 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAD2-ZBTB7C SMAD2 chr18 45456732 - ZBTB7C chr18 45567494 - Exonic hg19 ACC TCGA-OU-A5PI-01A 10 5 5'UTR-5'UTR Intra-chr q21.1 Oncogene Tumor suppressor gene q21.1 Tumor suppressor gene Transcription factor 72790 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAD3-AAGAB SMAD3 chr15 67430438 - AAGAB chr15 67529158 - Exonic hg19 BLCA TCGA-GU-A42Q-01A 39 33 Out-of-frame Intra-chr q22.33 Transcription factor q23 Seq+ 72791 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAD3-AAGAB SMAD3 chr15 67358698 - AAGAB chr15 67495236 - Exonic hg19 SARC TCGA-K1-A42X-01A 58 21 Out-of-frame Intra-chr q22.33 Transcription factor q23 Seq+ 72792 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAD3-AAGAB SMAD3 chr15 67358698 - AAGAB chr15 67495236 - Exonic hg19 SARC TCGA-K1-A42X-02A 45 15 Out-of-frame Intra-chr q22.33 Transcription factor q23 Seq+ 72793 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAD3-C15orf44 SMAD3 chr15 67358698 - C15orf44 chr15 65877226 - Exonic hg19 SARC TCGA-VT-A80J-01A 11 8 Out-of-frame Intra-chr q22.33 Transcription factor Seq+ 72794 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAD3-DIS3L SMAD3 chr15 67358698 - DIS3L chr15 66604062 + Exonic hg19 BRCA TCGA-A7-A26G-01A 11 17 Out-of-frame Intra-chr q22.33 Transcription factor q22.31 Seq+ 72795 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAD3-DLGAP4 SMAD3 chr15 67358698 - DLGAP4 chr20 35125108 + Exonic hg19 KIRC TCGA-CW-6087-01A 9 5 Out-of-frame Inter-chr q22.33 Transcription factor q11.23 Seq+ 72796 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAD3-IL17RA SMAD3 chr15 67358698 - IL17RA chr22 17577952 + Exonic hg19 STAD TCGA-CD-A486-01A 2 22 Out-of-frame Inter-chr q22.33 Transcription factor q11.1 Seq+ 72797 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAD3-SENP8 SMAD3 chr15 67358698 - SENP8 chr15 72431918 + Exonic hg19 BRCA TCGA-E2-A1LA-01A 5 5 5'UTR-5'UTR Intra-chr q22.33 Transcription factor q23 Seq+ 72798 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAD3-SMAD6 SMAD3 chr15 67358698 - SMAD6 chr15 67073335 + Exonic hg19 LUAD TCGA-05-4427-01A 8 5 Out-of-frame Intra-chr q22.33 Transcription factor q22.31 72799 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAD3-SMAD6 SMAD3 chr15 67358698 - SMAD6 chr15 67073335 + Exonic hg19 STAD TCGA-BR-8289-01A 10 77 Out-of-frame Intra-chr q22.33 Transcription factor q22.31 72800 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAD4-NRG1 SMAD4 chr18 48556993 - NRG1 chr8 32585467 + Exonic hg19 LUSC TCGA-63-A5MP-01A 16 11 5'UTR-CDS Inter-chr q21.2 Oncogene Tumor suppressor gene Transcription factor p12 Seq+ 72801 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAD4-SKAP1 SMAD4 chr18 48593557 - SKAP1 chr17 46474147 - Exonic hg19 PRAD TCGA-J4-A67L-01A 5 3 Out-of-frame Inter-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q21.32 Seq+ 72802 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAD5-COL5A1 SMAD5 chr5 135468651 - COL5A1 chr9 137591755 + Exonic hg19 LGG TCGA-WY-A859-01A 2 7 5'UTR-CDS Inter-chr q31.1 Transcription factor q34.3 Seq+ 72803 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAD6-FAM96A SMAD6 chr15 67008836 - FAM96A chr15 64373350 - Exonic hg19 READ TCGA-AG-3731-01A 78 81 In-Frame Intra-chr q22.31 q22.31 Seq+ 72804 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAD7-CTIF SMAD7 chr18 46474754 - CTIF chr18 46162985 + Exonic hg19 SARC TCGA-IE-A3OV-01A 20 10 Out-of-frame Intra-chr q21.1 Seq+ 72805 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAD7-DYM SMAD7 chr18 46468851 - DYM chr18 46690157 - Exonic hg19 BRCA TCGA-BH-A1FD-01A 4 3 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 72806 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAD7-DYM SMAD7 chr18 46468851 - DYM chr18 46645296 - Exonic hg19 LIHC TCGA-DD-A73F-01A 7 7 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 72807 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAD7-DYM SMAD7 chr18 46468851 - DYM chr18 46570574 - Exonic hg19 UCS TCGA-NA-A4R0-01A 73 41 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 72808 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAD9-CCNA1 SMAD9 chr13 37427556 - CCNA1 chr13 37007170 + Exonic hg19 PRAD TCGA-J4-AATZ-01A 14 12 In-Frame Intra-chr q13.3 Transcription factor q13.3 Seq+ 72809 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAGP-NELL2 SMAGP chr12 51664040 - NELL2 chr12 45269683 - Exonic hg19 LUSC TCGA-NC-A5HL-01A 2 1 5'UTR-5'UTR Intra-chr q13.13 q12 72810 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAGP-TBC1D30 SMAGP chr12 51663029 - TBC1D30 chr12 65237160 + Exonic hg19 ESCA TCGA-L5-A43M-01A 4 43 Out-of-frame Intra-chr q13.13 q14.3 Seq+ 72811 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAP1-C14orf132 SMAP1 chr6 71442214 - C14orf132 chr14 96552848 + Exonic hg19 BRCA TCGA-E2-A15P-01A 8 5 In-Frame Inter-chr q13 q32.2 Seq+ 72812 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAP1-CGA SMAP1 chr6 71483128 - CGA chr6 87797925 - Exonic hg19 PRAD TCGA-CH-5737-01A 2 8 CDS-5'UTR Intra-chr q13 q14.3 Seq+ 72813 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAP1-FAR2 SMAP1 chr6 71508440 - FAR2 chr12 29423345 + Exonic hg19 SKCM TCGA-ER-A19T-01A 2 1 CDS-5'UTR Inter-chr q13 p11.22 72814 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAP1-KHDC1 SMAP1 chr6 71508440 - KHDC1 chr6 74001763 - Exonic hg19 HNSC TCGA-F7-A623-01A 2 5 Out-of-frame Intra-chr q13 q13 Seq+ 72815 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMAP2-NLRX1 SMAP2 chr1 40839895 - NLRX1 chr11 119042065 + Exonic hg19 SKCM TCGA-EB-A5SH-06A 29 29 5'UTR-5'UTR Inter-chr p34.2 q23.3 Seq+ 72816 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCA1-ALG13 SMARCA1 chrX 128633709 - ALG13 chrX 110925464 + Exonic hg19 PRAD TCGA-TK-A8OK-01A 13 1 In-Frame Intra-chr q26.1 q23 72817 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCA2-AC074212.3 SMARCA2 chr9 2123937 - AC074212.3 chr19 46238635 + Exonic hg19 SKCM TCGA-D9-A4Z5-01A 4 10 Out-of-frame Inter-chr p24.3 Tumor suppressor gene 72818 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCA2-BEND2 SMARCA2 chr9 2039900 - BEND2 chrX 18213562 - Exonic hg19 PAAD TCGA-3A-A9IR-01A 36 17 In-Frame Inter-chr p24.3 Tumor suppressor gene p22.13 Seq+ 72819 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCA2-DMRT1 SMARCA2 chr9 2088613 - DMRT1 chr9 916763 + Exonic hg19 HNSC TCGA-CV-7415-01A 18 6 In-Frame Intra-chr p24.3 Tumor suppressor gene p24.3 Transcription factor Seq+ 72820 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCA4-C19orf38 SMARCA4 chr19 11101999 - C19orf38 chr19 10979894 + Exonic hg19 LUSC TCGA-66-2771-01A 4 3 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 72821 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCA4-C19orf38 SMARCA4 chr19 11098600 - C19orf38 chr19 10979894 + Exonic hg19 STAD TCGA-BR-4357-01A 13 9 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 72822 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCA4-CARM1 SMARCA4 chr19 11097679 - CARM1 chr19 11024553 + Exonic hg19 BRCA TCGA-AQ-A04J-01A 5 2 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 72823 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCA4-CARM1 SMARCA4 chr19 11100119 - CARM1 chr19 11022860 + Exonic hg19 STAD TCGA-VQ-A91K-01A 16 202 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 72824 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCA4-DNM2 SMARCA4 chr19 11071850 - DNM2 chr19 10916592 + Exonic hg19 ESCA TCGA-2H-A9GN-01A 14 77 5'UTR-CDS Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 72825 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCA4-DNM2 SMARCA4 chr19 11071850 - DNM2 chr19 10883155 + Exonic hg19 BRCA TCGA-A7-A4SD-01A 35 19 5'UTR-CDS Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 72826 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCA4-DNM2 SMARCA4 chr19 11136184 - DNM2 chr19 10930656 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 161 93 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 72827 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCA4-DNM2 SMARCA4 chr19 11170863 - DNM2 chr19 10939712 + Exonic hg19 UCS TCGA-N5-A4RT-01A 6 4 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 72828 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCA4-DOCK6 SMARCA4 chr19 11130377 - DOCK6 chr19 11311728 - Exonic hg19 LUAD TCGA-55-8505-01A 65 31 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 72829 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCA4-ICAM1 SMARCA4 chr19 11071850 - ICAM1 chr19 10385441 + Exonic hg19 BRCA TCGA-AR-A256-01A 16 16 5'UTR-CDS Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 72830 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCA4-KDM4B SMARCA4 chr19 11100119 - KDM4B chr19 5071021 + Exonic hg19 LUSC TCGA-NC-A5HM-01A 4 2 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.3 Seq+ 72831 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCA4-RNF216 SMARCA4 chr19 11152236 - RNF216 chr7 5800769 - Exonic hg19 UCS TCGA-N6-A4VG-01A 27 1 CDS-5'UTR Inter-chr p13.2 Oncogene Tumor suppressor gene p22.1 Seq+ 72832 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCA4-SLC44A2 SMARCA4 chr19 11107220 - SLC44A2 chr19 10745432 + Exonic hg19 ESCA TCGA-JY-A6FH-01A 4 24 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 72833 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCA4-SLC44A2 SMARCA4 chr19 11114073 - SLC44A2 chr19 10736929 + Exonic hg19 PRAD TCGA-KK-A5A1-01A 2 2 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 72834 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCAD1-GRID2 SMARCAD1 chr4 95174158 - GRID2 chr4 94547420 + Exonic hg19 LGG TCGA-DU-A7TD-01A 18 19 In-Frame Intra-chr q22.3 q22.1 Seq+ 72835 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCB1-HRASLS2 SMARCB1 chr22 24159123 - HRASLS2 chr11 63320537 - Exonic hg19 PRAD TCGA-EJ-A7NN-01A 10 7 In-Frame Inter-chr q11.23 Oncogene Tumor suppressor gene q12.3 Tumor suppressor gene Seq+ 72836 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCB1-SNW1 SMARCB1 chr22 24129449 - SNW1 chr14 78201355 - Exonic hg19 BLCA TCGA-UY-A9PE-01A 12 7 In-Frame Inter-chr q11.23 Oncogene Tumor suppressor gene q24.3 Seq+ 72837 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCC1-CDC25A SMARCC1 chr3 47814307 - CDC25A chr3 48229705 - Exonic hg19 SKCM TCGA-WE-A8ZM-06A 2 3 CDS-5'UTR Intra-chr p21.31 Tumor suppressor gene p21.31 72838 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCC1-DHX30 SMARCC1 chr3 47814307 - DHX30 chr3 47846816 + Exonic hg19 UCS TCGA-N5-A4RT-01A 4 2 CDS-5'UTR Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 72839 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCC1-DOCK3 SMARCC1 chr3 47814307 - DOCK3 chr3 50927457 + Exonic hg19 BLCA TCGA-BL-A3JM-01A 5 14 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.2 Seq+ 72840 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCC1-SHISA5 SMARCC1 chr3 47747899 - SHISA5 chr3 48511242 - Exonic hg19 BLCA TCGA-BT-A20W-01A 20 32 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 72841 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCC1-SPINK8 SMARCC1 chr3 47777524 - SPINK8 chr3 48351436 - Exonic hg19 PRAD TCGA-HC-8265-01B 6 3 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 72842 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCC1-SYCP2L SMARCC1 chr3 47814307 - SYCP2L chr6 10942910 + Exonic hg19 UCEC TCGA-AP-A5FX-01A 2 4 In-Frame Inter-chr p21.31 Tumor suppressor gene p24.2 Seq+ 72843 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCC1-USP32 SMARCC1 chr3 47727539 - USP32 chr17 58422969 - Exonic hg19 SARC TCGA-DX-A3M1-01A 4 1 Out-of-frame Inter-chr p21.31 Tumor suppressor gene q23.2 72844 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCC1-ZBTB8OS SMARCC1 chr3 47651556 - ZBTB8OS chr1 33087549 - Exonic hg19 UCEC TCGA-H5-A2HR-01A 53 37 Out-of-frame Inter-chr p21.31 Tumor suppressor gene p35.1 Seq+ 72845 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCC2-CS SMARCC2 chr12 56561844 - CS chr12 56680429 - Exonic hg19 UCEC TCGA-A5-A7WK-01A 13 9 In-Frame Intra-chr q13.2 q13.3 Seq+ 72846 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCD2-NUFIP2 SMARCD2 chr17 61912065 - NUFIP2 chr17 27594548 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 34 28 Out-of-frame Intra-chr q23.3 q11.2 Seq+ 72847 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCD3-PRKAG2 SMARCD3 chr7 150972200 - PRKAG2 chr7 151329224 - Exonic hg19 UCEC TCGA-PG-A914-01A 3 1 In-Frame Intra-chr q36.1 q36.1 72848 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMARCE1-RARA SMARCE1 chr17 38792183 - RARA chr17 38511515 + Exonic hg19 READ TCGA-AH-6643-01A 330 65 In-Frame Intra-chr q21.2 q21.2 Oncogene Transcription factor Seq+ 72849 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMC2-AKNA SMC2 chr9 106874095 - AKNA chr9 117126899 - Exonic hg19 SKCM TCGA-ER-A19E-06A 2 5 In-Frame Intra-chr q31.1 q32 Transcription factor Seq+ 72850 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMC2-PGM5 SMC2 chr9 106892126 - PGM5 chr9 71114143 + Exonic hg19 BRCA TCGA-AO-A129-01A 9 3 In-Frame Intra-chr q31.1 q21.11 Seq+ 72851 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMC3-MXI1 SMC3 chr10 112350330 - MXI1 chr10 112038938 + Exonic hg19 ESCA TCGA-L5-A4OQ-01A 6 17 In-Frame Intra-chr q25.2 q25.2 Tumor suppressor gene Transcription factor Seq+ 72852 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMC5-IMMP2L SMC5 chr9 72882891 - IMMP2L chr7 110603621 - Exonic hg19 BRCA TCGA-AO-A124-01A 377 384 In-Frame Inter-chr q21.12 q31.1 Seq+ 72853 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMC5-MAMDC2 SMC5 chr9 72939059 - MAMDC2 chr9 72840666 + Exonic hg19 BRCA TCGA-BH-A0EE-01A 2 1 In-Frame Intra-chr q21.12 q21.12 72854 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMCHD1-NDC80 SMCHD1 chr18 2656260 - NDC80 chr18 2601395 + Exonic hg19 UCEC TCGA-2E-A9G8-01A 212 16 In-Frame Intra-chr p11.32 Tumor suppressor gene p11.32 Seq+ 72855 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMCHD1-NDC80 SMCHD1 chr18 2688745 - NDC80 chr18 2585112 + Exonic hg19 LUAD TCGA-62-A46U-01A 40 20 In-Frame Intra-chr p11.32 Tumor suppressor gene p11.32 Seq+ 72856 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMCHD1-NDC80 SMCHD1 chr18 2732490 - NDC80 chr18 2599018 + Exonic hg19 SARC TCGA-IF-A4AJ-01A 79 78 In-Frame Intra-chr p11.32 Tumor suppressor gene p11.32 Seq+ 72857 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMCHD1-NDC80 SMCHD1 chr18 2656260 - NDC80 chr18 2599018 + Exonic hg19 BLCA TCGA-ZF-A9RD-01A 66 5 In-Frame Intra-chr p11.32 Tumor suppressor gene p11.32 Seq+ 72858 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMEK1-FBLN5 SMEK1 chr14 91975850 - FBLN5 chr14 92403545 - Exonic hg19 LUAD TCGA-69-7979-01A 3 2 In-Frame Intra-chr q32.12 Seq+ 72859 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMEK1-FBLN5 SMEK1 chr14 91975850 - FBLN5 chr14 92361416 - Exonic hg19 UCEC TCGA-AX-A2H4-01A 17 2 In-Frame Intra-chr q32.12 Seq+ 72860 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMEK1-FBLN5 SMEK1 chr14 91975850 - FBLN5 chr14 92361416 - Exonic hg19 STAD TCGA-BR-A4QI-01A 20 380 In-Frame Intra-chr q32.12 Seq+ 72861 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMEK1-FBXO34 SMEK1 chr14 91975850 - FBXO34 chr14 55817099 + Exonic hg19 BRCA TCGA-A8-A079-01A 15 10 CDS-5'UTR Intra-chr q22.3 Seq+ 72862 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMEK2-ALK SMEK2 chr2 55804451 - ALK chr2 29940563 - Exonic hg19 READ TCGA-F5-6864-01A 4 6 In-Frame Intra-chr p23.1 TK:ALK Oncogene Seq+ 72863 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMEK2-EFEMP1 SMEK2 chr2 55842587 - EFEMP1 chr2 56108869 - Exonic hg19 COAD TCGA-DM-A288-01A 5 2 Out-of-frame Intra-chr p16.1 72864 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMEK2-IL18RAP SMEK2 chr2 55785911 - IL18RAP chr2 103053672 + Exonic hg19 LGG TCGA-DU-6397-02A 4 3 In-Frame Intra-chr q12.1 72865 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMEK2-KYNU SMEK2 chr2 55842587 - KYNU chr2 143642918 + Exonic hg19 SARC TCGA-N1-A6IA-01A 2 3 CDS-5'UTR Intra-chr q22.2 Seq+ 72866 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMG1-ANO3 SMG1 chr16 18869492 - ANO3 chr11 26669256 + Exonic hg19 BRCA TCGA-A2-A0EY-01A 3 6 In-Frame Inter-chr p12.3 Atypical:PIKK p14.2 Seq+ 72867 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMG1-SNF8 SMG1 chr16 18937272 - SNF8 chr17 47018424 - Exonic hg19 PRAD TCGA-XJ-A9DK-01A 7 14 Out-of-frame Inter-chr p12.3 Atypical:PIKK q21.32 Seq+ 72868 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMG5-CCT3 SMG5 chr1 156228796 - CCT3 chr1 156288808 - Exonic hg19 ESCA TCGA-Z6-AAPN-01A 35 274 In-Frame Intra-chr q22 q22 Seq+ 72869 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMG5-MEF2D SMG5 chr1 156228796 - MEF2D chr1 156438812 - Exonic hg19 UCS TCGA-N5-A4RD-01A 14 6 Out-of-frame Intra-chr q22 q22 Transcription factor Seq+ 72870 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMG5-PMF1 SMG5 chr1 156235572 - PMF1 chr1 156206079 + Exonic hg19 STAD TCGA-BR-8373-01A 25 72 Out-of-frame Intra-chr q22 q22 Seq+ 72871 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMG6-ANKFY1 SMG6 chr17 1985104 - ANKFY1 chr17 4145743 - Exonic hg19 PRAD TCGA-YJ-A8SW-01A 3 4 Out-of-frame Intra-chr p13.3 p13.2 72872 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMG6-C10orf11 SMG6 chr17 2075952 - C10orf11 chr10 78316967 + Exonic hg19 PRAD TCGA-J9-A8CK-01A 17 8 Out-of-frame Inter-chr p13.3 Seq+ 72873 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMG6-DHX33 SMG6 chr17 2075952 - DHX33 chr17 5347833 - Exonic hg19 PRAD TCGA-EJ-A46G-01A 10 1 In-Frame Intra-chr p13.3 p13.2 72874 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMG6-NXN SMG6 chr17 2075952 - NXN chr17 704371 - Exonic hg19 BRCA TCGA-A2-A04U-01A 7 8 In-Frame Intra-chr p13.3 p13.3 Seq+ 72875 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMG6-RECK SMG6 chr17 2139786 - RECK chr9 36107973 + Exonic hg19 SARC TCGA-IE-A3OV-01A 4 1 In-Frame Inter-chr p13.3 p13.3 Tumor suppressor gene 72876 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMG6-SHPK SMG6 chr17 2139786 - SHPK chr17 3518831 - Exonic hg19 PRAD TCGA-HC-8265-01B 2 1 In-Frame Intra-chr p13.3 p13.2 72877 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMG6-VPS53 SMG6 chr17 2075952 - VPS53 chr17 565135 - Exonic hg19 PAAD TCGA-3A-A9IN-01A 2 2 In-Frame Intra-chr p13.3 Tumor suppressor gene 72878 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMG6-WDR20 SMG6 chr17 2206308 - WDR20 chr14 102661275 + Exonic hg19 BRCA TCGA-A2-A25B-01A 12 7 5'UTR-5'UTR Inter-chr p13.3 q32.31 Seq+ 72879 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMG7-GLT25D2 SMG7 chr1 183441784 - GLT25D2 chr1 183947654 - Exonic hg19 BLCA TCGA-K4-AAQO-01A 4 1 In-Frame Intra-chr q25.3 72880 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMG9-KCNN4 SMG9 chr19 44241749 - KCNN4 chr19 44271241 - Exonic hg19 BLCA TCGA-DK-A2I1-01A 22 16 CDS-3'UTR Intra-chr q13.31 q13.31 Seq+ 72881 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMO-TSPAN33 SMO chr7 128829323 - TSPAN33 chr7 128801520 + Exonic hg19 LUSC TCGA-NC-A5HT-01A 7 2 Out-of-frame Intra-chr q32.1 Oncogene q32.1 Seq+ 72882 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMOX-EIF3D SMOX chr20 4129624 - EIF3D chr22 36922178 - Exonic hg19 LGG TCGA-CS-5397-01A 37 21 5'UTR-5'UTR Inter-chr p13 q12.3 Seq+ 72883 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMOX-PANK2 SMOX chr20 4129624 - PANK2 chr20 3888573 + Exonic hg19 PRAD TCGA-YJ-A8SW-01A 3 8 5'UTR-5'UTR Intra-chr p13 p13 Seq+ 72884 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMOX-SLC24A3 SMOX chr20 4129624 - SLC24A3 chr20 19634706 + Exonic hg19 LIHC TCGA-DD-A4NO-01A 9 2 5'UTR-CDS Intra-chr p13 p11.23 Seq+ 72885 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMPD3-AP1G2 SMPD3 chr16 68392230 - AP1G2 chr14 24037279 - Exonic hg19 BRCA TCGA-AQ-A54O-01A 2 1 3'UTR-5'UTR Inter-chr q22.1 q11.2 72886 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMPD3-C16orf73 SMPD3 chr16 68482256 - C16orf73 chr16 1912117 - Exonic hg19 LUAD TCGA-75-6214-01A 4 1 5'UTR-CDS Intra-chr q22.1 72887 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMPX-PDHA1 SMPX chrX 21761868 - PDHA1 chrX 19367430 + Exonic hg19 SARC TCGA-QQ-A5VA-01A 22 21 In-Frame Intra-chr p22.12 p22.12 Seq+ 72888 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMU1-AFAP1 SMU1 chr9 33068822 - AFAP1 chr4 7873807 - Exonic hg19 LUSC TCGA-63-A5MV-01A 7 1 CDS-5'UTR Inter-chr p21.1 p16.1 Seq+ 72889 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMU1-B4GALT1 SMU1 chr9 33068822 - B4GALT1 chr9 33104779 - Exonic hg19 HNSC TCGA-CV-7428-01A 3 3 CDS-3'UTR Intra-chr p21.1 p21.1 Seq+ 72890 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMU1-C9orf25 SMU1 chr9 33053121 - C9orf25 chr9 34405962 - Exonic hg19 UCEC TCGA-D1-A3DG-01A 2 12 Out-of-frame Intra-chr p21.1 72891 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMUG1-PPP2R5A SMUG1 chr12 54576288 - PPP2R5A chr1 212506839 + Exonic hg19 PRAD TCGA-XJ-A83H-01A 2 3 In-Frame Inter-chr q13.13 Oncogene q32.3 Seq+ 72892 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMURF1-AKAP9 SMURF1 chr7 98741349 - AKAP9 chr7 91711836 + Exonic hg19 PAAD TCGA-IB-AAUS-01A 2 1 Out-of-frame Intra-chr q21.2 Oncogene 72893 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMURF1-AZGP1 SMURF1 chr7 98741349 - AZGP1 chr7 99569629 - Exonic hg19 HNSC TCGA-CN-6018-01A 20 6 CDS-5'UTR Intra-chr q22.1 Tumor suppressor gene Seq+ 72894 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMURF1-CDK14 SMURF1 chr7 98658222 - CDK14 chr7 90675212 + Exonic hg19 STAD TCGA-BR-8484-01A 97 303 Out-of-frame Intra-chr q21.13 Seq+ 72895 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMURF1-CFLAR SMURF1 chr7 98741349 - CFLAR chr2 201994452 + Exonic hg19 ESCA TCGA-L5-A4OS-01A 11 33 CDS-5'UTR Inter-chr q33.1 Seq+ 72896 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMURF1-DNAJC2 SMURF1 chr7 98741349 - DNAJC2 chr7 102982312 - Exonic hg19 LUAD TCGA-49-AAR0-01A 14 8 In-Frame Intra-chr q22.1 Seq+ 72897 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMURF1-GJC3 SMURF1 chr7 98741349 - GJC3 chr7 99521226 - Exonic hg19 HNSC TCGA-CN-6018-01A 6 1 In-Frame Intra-chr q22.1 Seq+ 72898 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMURF1-GJC3 SMURF1 chr7 98741349 - GJC3 chr7 99521226 - Exonic hg19 LGG TCGA-FG-5963-01A 70 59 In-Frame Intra-chr q22.1 Seq+ 72899 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMURF1-GJC3 SMURF1 chr7 98741349 - GJC3 chr7 99521226 - Exonic hg19 LGG TCGA-FG-5963-02A 169 94 In-Frame Intra-chr q22.1 Seq+ 72900 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMURF1-KPNA7 SMURF1 chr7 98741349 - KPNA7 chr7 98790724 - Exonic hg19 LIHC TCGA-ZS-A9CG-01A 13 11 In-Frame Intra-chr Seq+ 72901 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMURF1-PTCD1 SMURF1 chr7 98741349 - PTCD1 chr7 99027429 - Exonic hg19 ESCA TCGA-L5-A4OQ-01A 3 18 Out-of-frame Intra-chr q22.1 Seq+ 72902 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMURF1-SLC26A5 SMURF1 chr7 98741349 - SLC26A5 chr7 102993373 - Exonic hg19 LUAD TCGA-49-AAR0-01A 25 3 In-Frame Intra-chr q22.1 Seq+ 72903 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMURF1-TRIM4 SMURF1 chr7 98741349 - TRIM4 chr7 99507283 - Exonic hg19 LGG TCGA-FG-5963-01A 4 2 Out-of-frame Intra-chr q22.1 Seq+ 72904 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMURF1-TRIM4 SMURF1 chr7 98741349 - TRIM4 chr7 99507283 - Exonic hg19 LGG TCGA-FG-5963-02A 28 12 Out-of-frame Intra-chr q22.1 Seq+ 72905 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMURF2-DEDD2 SMURF2 chr17 62657947 - DEDD2 chr19 42719404 - Exonic hg19 PRAD TCGA-HC-8216-01A 3 5 In-Frame Inter-chr q24.1 q13.2 Seq+ 72906 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMURF2-GNA13 SMURF2 chr17 62657947 - GNA13 chr17 63014421 - Exonic hg19 UCEC TCGA-PG-A914-01A 3 7 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 72907 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMURF2-IKZF3 SMURF2 chr17 62657947 - IKZF3 chr17 37949186 - Exonic hg19 BRCA TCGA-AR-A250-01A 4 15 In-Frame Intra-chr q24.1 q21.1 Tumor suppressor gene Transcription factor Seq+ 72908 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMURF2-LRRC37A3 SMURF2 chr17 62657947 - LRRC37A3 chr17 62852007 - Exonic hg19 LUAD TCGA-78-8662-01A 9 21 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 72909 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMURF2-NGFR SMURF2 chr17 62657947 - NGFR chr17 47579425 + Exonic hg19 BRCA TCGA-AR-A250-01A 14 16 Out-of-frame Intra-chr q24.1 q21.33 Tumor suppressor gene Seq+ 72910 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMURF2-TEKT3 SMURF2 chr17 62582204 - TEKT3 chr17 15234931 - Exonic hg19 PCPG TCGA-SR-A6MP-01A 2 3 CDS-5'UTR Intra-chr q24.1 p12 Seq+ 72911 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMURF2-UBAC2 SMURF2 chr17 62579579 - UBAC2 chr13 99966351 + Exonic hg19 SKCM TCGA-EE-A29L-06A 19 14 In-Frame Inter-chr q24.1 q32.3 Seq+ 72912 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMYD2-LPGAT1 SMYD2 chr1 214498051 - LPGAT1 chr1 211924409 - Exonic hg19 SKCM TCGA-D3-A2JB-06A 6 3 In-Frame Intra-chr q32.3 q32.3 Seq+ 72913 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMYD2-PGBD2 SMYD2 chr1 214454770 - PGBD2 chr1 249208015 + Exonic hg19 LUSC TCGA-56-A4ZK-01A 6 5 CDS-5'UTR Intra-chr q32.3 q44 Seq+ 72914 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMYD2-PROX1 SMYD2 chr1 214501067 - PROX1 chr1 214208992 + Exonic hg19 LIHC TCGA-ED-A7PX-01A 14 18 In-Frame Intra-chr q32.3 q32.3 Tumor suppressor gene Transcription factor Seq+ 72915 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMYD2-PTP4A1 SMYD2 chr1 214454770 - PTP4A1 chr6 64286341 + Exonic hg19 BLCA TCGA-XF-AAMT-01A 4 2 CDS-5'UTR Inter-chr q32.3 q12 Seq+ 72916 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMYD3-COPA SMYD3 chr1 245927343 - COPA chr1 160305112 - Exonic hg19 PRAD TCGA-EJ-5518-01A 18 6 In-Frame Intra-chr q44 Transcription factor q23.2 Seq+ 72917 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMYD3-EDARADD SMYD3 chr1 246670356 - EDARADD chr1 236572516 + Exonic hg19 LUAD TCGA-05-4250-01A 6 2 Out-of-frame Intra-chr q44 Transcription factor q42.3 Seq+ 72918 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMYD3-RP11-439E19.8 SMYD3 chr1 246670356 - RP11-439E19.8 chr1 246944359 - Exonic hg19 SKCM TCGA-D3-A51G-06A 14 5 Out-of-frame Intra-chr q44 Transcription factor 72919 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMYD3-TFB2M SMYD3 chr1 246670356 - TFB2M chr1 246711909 - Exonic hg19 BRCA TCGA-A2-A25B-01A 6 4 Out-of-frame Intra-chr q44 Transcription factor q44 Seq+ 72920 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMYD3-TRIM58 SMYD3 chr1 246490503 - TRIM58 chr1 248023919 + Exonic hg19 PRAD TCGA-EJ-7789-01A 9 5 In-Frame Intra-chr q44 Transcription factor q44 Seq+ 72921 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMYD3-WLS SMYD3 chr1 246518333 - WLS chr1 68659910 - Exonic hg19 BRCA TCGA-E9-A1N6-01A 21 8 Out-of-frame Intra-chr q44 Transcription factor p31.3 Seq+ 72922 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMYD3-ZMYM4 SMYD3 chr1 246490503 - ZMYM4 chr1 35835630 + Exonic hg19 SKCM TCGA-DA-A1I7-06A 13 3 In-Frame Intra-chr q44 Transcription factor p34.3 Seq+ 72923 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMYD3-ZNF695 SMYD3 chr1 246670356 - ZNF695 chr1 247131094 - Exonic hg19 HNSC TCGA-CN-6018-01A 12 3 Out-of-frame Intra-chr q44 Transcription factor q44 Transcription factor Seq+ 72924 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMYD3-ZNF695 SMYD3 chr1 246670356 - ZNF695 chr1 247109129 - Exonic hg19 BLCA TCGA-DK-AA6W-01A 34 10 In-Frame Intra-chr q44 Transcription factor q44 Transcription factor Seq+ 72925 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMYD3-ZNF695 SMYD3 chr1 246670356 - ZNF695 chr1 247131094 - Exonic hg19 ESCA TCGA-LN-A4A1-01A 2 19 Out-of-frame Intra-chr q44 Transcription factor q44 Transcription factor Seq+ 72926 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMYD4-AC091153.1 SMYD4 chr17 1686329 - AC091153.1 chr17 4594737 - Exonic hg19 LIHC TCGA-CC-A8HV-01A 5 3 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p13.2 72927 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMYD4-SERPINF1 SMYD4 chr17 1715265 - SERPINF1 chr17 1673146 + Exonic hg19 STAD TCGA-CG-4462-01A 17 12 In-Frame Intra-chr p13.3 Tumor suppressor gene 72928 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SMYD4-TUSC5 SMYD4 chr17 1731155 - TUSC5 chr17 1201545 + Exonic hg19 UCEC TCGA-A5-A1OH-01A 2 1 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p13.3 72929 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNAI1-PFDN4 SNAI1 chr20 48600888 - PFDN4 chr20 52835558 + Exonic hg19 LUAD TCGA-50-5072-01A 4 3 Out-of-frame Intra-chr q13.13 Transcription factor q13.2 Seq+ 72930 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNAI1-PFDN4 SNAI1 chr20 48600888 - PFDN4 chr20 52835558 + Exonic hg19 LUAD TCGA-91-6831-01A 20 22 Out-of-frame Intra-chr q13.13 Transcription factor q13.2 Seq+ 72931 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNAI1-SLC9A8 SNAI1 chr20 48599678 - SLC9A8 chr20 48481265 + Exonic hg19 BRCA TCGA-OL-A5D6-01A 110 54 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 Seq+ 72932 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNAP29-IGLL1 SNAP29 chr22 21224821 - IGLL1 chr22 23917269 - Exonic hg19 BRCA TCGA-PE-A5DE-01A 88 81 In-Frame Intra-chr q11.21 q11.23 Seq+ 72933 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNAP91-BCKDHB SNAP91 chr6 84284729 - BCKDHB chr6 80982852 + Exonic hg19 PRAD TCGA-EJ-7789-01A 7 6 In-Frame Intra-chr q14.2 q14.1 Seq+ 72934 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNAP91-SMPX SNAP91 chr6 84303197 - SMPX chrX 21761954 - Exonic hg19 PRAD TCGA-KK-A8I6-01A 5 1 Out-of-frame Inter-chr q14.2 p22.12 Seq+ 72935 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNAPC1-RP11-47I22.3 SNAPC1 chr14 62235458 - RP11-47I22.3 chr14 62117680 + Exonic hg19 HNSC TCGA-CQ-6223-01A 30 10 Out-of-frame Intra-chr q23.2 72936 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNAPC3-KIAA1797 SNAPC3 chr9 15461803 - KIAA1797 chr9 20923659 + Exonic hg19 PCPG TCGA-QT-A5XJ-01A 5 3 Out-of-frame Intra-chr p22.3 72937 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNAPC5-BPIFB4 SNAPC5 chr15 66789980 - BPIFB4 chr20 31692616 + Exonic hg19 BRCA TCGA-E2-A14V-01A 23 23 In-Frame Inter-chr q22.31 Transcription factor q11.21 Seq+ 72938 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNAPIN-FMNL1 SNAPIN chr1 153632042 - FMNL1 chr17 43317843 + Exonic hg19 ESCA TCGA-R6-A8W5-01B 2 47 In-Frame Inter-chr q21.3 q21.31 Seq+ 72939 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNAPIN-S100A1 SNAPIN chr1 153632042 - S100A1 chr1 153604174 + Exonic hg19 LUAD TCGA-64-1678-01A 28 16 In-Frame Intra-chr q21.3 q21.3 Seq+ 72940 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNCAIP-CSNK1G3 SNCAIP chr5 121739560 - CSNK1G3 chr5 122881111 + Exonic hg19 PAAD TCGA-IB-AAUU-01A 4 3 CDS-5'UTR Intra-chr q23.2 q23.2 Seq+ 72941 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SND1-AKAP9 SND1 chr7 127447627 - AKAP9 chr7 91734992 + Exonic hg19 KIRP TCGA-5P-A9JZ-01A 8 10 Out-of-frame Intra-chr q32.1 q21.2 Oncogene Seq+ 72942 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SND1-BRAF SND1 chr7 127361454 - BRAF chr7 140487384 - Exonic hg19 THCA TCGA-DJ-A3UZ-01A 6 3 In-Frame Intra-chr q32.1 q34 TKL:RAF Oncogene KB Pub Seq+ 72943 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SND1-BRAF SND1 chr7 127721553 - BRAF chr7 140482957 - Exonic hg19 THCA TCGA-EL-A3ZK-01A 21 3 In-Frame Intra-chr q32.1 q34 TKL:RAF Oncogene KB Pub Seq+ 72944 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SND1-BRAF SND1 chr7 127361454 - BRAF chr7 140487384 - Exonic hg19 THCA TCGA-FY-A40N-01A 15 9 In-Frame Intra-chr q32.1 q34 TKL:RAF Oncogene KB Pub Seq+ 72945 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SND1-GRM8 SND1 chr7 127361454 - GRM8 chr7 126544737 - Exonic hg19 BRCA TCGA-A1-A0SN-01A 6 7 Out-of-frame Intra-chr q32.1 q31.33 Oncogene Seq+ 72946 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SND1-IMMP2L SND1 chr7 127569382 - IMMP2L chr7 110303777 - Exonic hg19 SARC TCGA-FX-A3RE-01A 204 74 Out-of-frame Intra-chr q32.1 q31.1 Seq+ 72947 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNED1-HJURP SNED1 chr2 241938467 - HJURP chr2 234752929 - Exonic hg19 BRCA TCGA-A8-A084-01A 3 6 In-Frame Intra-chr q37.3 q37.1 Seq+ 72948 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNIP1-PUM1 SNIP1 chr1 38018246 - PUM1 chr1 31501711 - Exonic hg19 LUAD TCGA-71-8520-01A 11 3 In-Frame Intra-chr p34.3 p35.2 Seq+ 72949 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNRK-SUCLG2 SNRK chr3 43328167 - SUCLG2 chr3 67451275 - Exonic hg19 SKCM TCGA-Z2-AA3S-06A 193 80 5'UTR-CDS Intra-chr p22.1 CAMK:CAMKL p14.1 Seq+ 72950 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNRNP40-BAI2 SNRNP40 chr1 31740718 - BAI2 chr1 32210332 - Exonic hg19 BLCA TCGA-DK-A1A6-01A 3 6 Out-of-frame Intra-chr p35.2 Seq+ 72951 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNRNP40-COL6A5 SNRNP40 chr1 31754221 - COL6A5 chr3 130187639 + Exonic hg19 CESC TCGA-VS-A9UO-01A 3 4 Out-of-frame Inter-chr p35.2 q22.1 Seq+ 72952 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNRNP40-EPB41 SNRNP40 chr1 31762101 - EPB41 chr1 29365766 + Exonic hg19 HNSC TCGA-DQ-7591-01A 2 1 Out-of-frame Intra-chr p35.2 p35.3 Tumor suppressor gene Seq+ 72953 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNRNP40-MAP2K5 SNRNP40 chr1 31762101 - MAP2K5 chr15 68040569 + Exonic hg19 STAD TCGA-HU-A4GF-01A 5 70 In-Frame Inter-chr p35.2 q23 STE:STE7 Seq+ 72954 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNRNP40-PEF1 SNRNP40 chr1 31762101 - PEF1 chr1 32101123 - Exonic hg19 UCEC TCGA-H5-A2HR-01A 3 1 In-Frame Intra-chr p35.2 p35.2 72955 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNRNP40-SPOCD1 SNRNP40 chr1 31754221 - SPOCD1 chr1 32267306 - Exonic hg19 STAD TCGA-HU-A4GF-01A 4 40 In-Frame Intra-chr p35.2 p35.2 Seq+ 72956 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNRNP48-STK3 SNRNP48 chr6 7594392 - STK3 chr8 99896062 - Exonic hg19 BRCA TCGA-GM-A2DD-01A 2 2 CDS-5'UTR Inter-chr p24.3 q22.2 72957 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNRNP70-CDC42EP5 SNRNP70 chr19 49589818 - CDC42EP5 chr19 54982906 - Exonic hg19 BLCA TCGA-XF-A9SV-01A 89 51 CDS-5'UTR Intra-chr q13.33 Seq+ 72958 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNRNP70-RABEP1 SNRNP70 chr19 49611860 - RABEP1 chr17 5283828 + Exonic hg19 BRCA TCGA-AR-A5QN-01A 2 5 Out-of-frame Inter-chr q13.33 p13.2 72959 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNRNP70-ZNFX1 SNRNP70 chr19 49611860 - ZNFX1 chr20 47863418 - Exonic hg19 SKCM TCGA-ER-A19P-06A 2 5 Out-of-frame Inter-chr q13.33 q13.13 72960 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNRPA-ANKRD24 SNRPA chr19 41257386 - ANKRD24 chr19 4199680 + Exonic hg19 KIRP TCGA-B9-A44B-01A 13 11 Out-of-frame Intra-chr q13.2 p13.3 Seq+ 72961 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNRPA-C19orf54 SNRPA chr19 41257386 - C19orf54 chr19 41251103 - Exonic hg19 LUAD TCGA-05-4432-01A 9 10 Out-of-frame Intra-chr q13.2 q13.2 72962 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNRPD1-OSBPL1A SNRPD1 chr18 19192404 - OSBPL1A chr18 21957499 - Exonic hg19 ESCA TCGA-L5-A4OF-01A 5 33 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 72963 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNRPN-CYFIP1 SNRPN chr15 25101863 - CYFIP1 chr15 22939175 + Exonic hg19 LGG TCGA-KT-A7W1-01A 15 20 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 72964 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNTA1-PXMP4 SNTA1 chr20 32026647 - PXMP4 chr20 32302542 - Exonic hg19 CESC TCGA-VS-A9UT-01A 5 3 Out-of-frame Intra-chr q11.21 q11.22 Seq+ 72965 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNTB1-COL22A1 SNTB1 chr8 121705932 - COL22A1 chr8 139715590 - Exonic hg19 BRCA TCGA-AO-A1KR-01A 5 3 Out-of-frame Intra-chr q24.12 q24.3 Seq+ 72966 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNTB1-ZNF250 SNTB1 chr8 121561002 - ZNF250 chr8 146115788 - Exonic hg19 BLCA TCGA-GC-A4ZW-01A 5 2 CDS-5'UTR Intra-chr q24.12 q24.3 Transcription factor Seq+ 72967 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNTB2-CHST4 SNTB2 chr16 69294163 - CHST4 chr16 71570563 + Exonic hg19 BRCA TCGA-A2-A0CU-01A 2 1 CDS-5'UTR Intra-chr q22.2 72968 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNTB2-CIRH1A SNTB2 chr16 69221649 - CIRH1A chr16 69177081 + Exonic hg19 LUAD TCGA-35-4122-01A 4 1 In-Frame Intra-chr Seq+ 72969 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNTB2-CIRH1A SNTB2 chr16 69221636 - CIRH1A chr16 69187487 + Exonic hg19 LUSC TCGA-37-A5EL-01A 16 9 Out-of-frame Intra-chr Seq+ 72970 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNTB2-CIRH1A SNTB2 chr16 69221649 - CIRH1A chr16 69196986 + Exonic hg19 KIRC TCGA-BP-4761-01A 32 13 Out-of-frame Intra-chr Seq+ 72971 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNTB2-NUP93 SNTB2 chr16 69304188 - NUP93 chr16 56852576 + Exonic hg19 SARC TCGA-VT-A80G-01A 2 1 Out-of-frame Intra-chr q13 Seq+ 72972 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNTB2-TMCO7 SNTB2 chr16 69221649 - TMCO7 chr16 68914451 + Exonic hg19 LUSC TCGA-56-8625-01A 7 2 In-Frame Intra-chr 72973 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNTB2-TMCO7 SNTB2 chr16 69279718 - TMCO7 chr16 69117388 + Exonic hg19 STAD TCGA-CG-4443-01A 5 6 Out-of-frame Intra-chr 72974 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNTB2-TMCO7 SNTB2 chr16 69221649 - TMCO7 chr16 69056731 + Exonic hg19 HNSC TCGA-CN-5359-01A 20 13 In-Frame Intra-chr 72975 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNTG2-RBKS SNTG2 chr2 1320147 - RBKS chr2 28055644 - Exonic hg19 SKCM TCGA-D3-A3CF-06A 19 18 Out-of-frame Intra-chr p23.2 Seq+ 72976 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNUPN-ZNF233 SNUPN chr15 75909749 - ZNF233 chr19 44768467 + Exonic hg19 LUSC TCGA-18-3414-01A 5 4 CDS-5'UTR Inter-chr q24.2 q13.31 Transcription factor 72977 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX1-FAM96A SNX1 chr15 64388371 - FAM96A chr15 64373350 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 37 25 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 72978 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX1-SCG5 SNX1 chr15 64429131 - SCG5 chr15 32971967 + Exonic hg19 SKCM TCGA-EB-A57M-01A 3 2 Out-of-frame Intra-chr q22.31 72979 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX11-MED24 SNX11 chr17 46196548 - MED24 chr17 38192407 - Exonic hg19 CESC TCGA-4J-AA1J-01A 5 2 Out-of-frame Intra-chr q21.32 q21.1 72980 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX11-SNF8 SNX11 chr17 46185200 - SNF8 chr17 47021337 - Exonic hg19 UCS TCGA-N8-A56S-01A 30 64 5'UTR-CDS Intra-chr q21.32 q21.32 Seq+ 72981 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX13-AUTS2 SNX13 chr7 17836450 - AUTS2 chr7 69755354 + Exonic hg19 COAD TCGA-AZ-4323-01A 3 1 Out-of-frame Intra-chr p21.1 q11.22 Seq+ 72982 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX13-GLCCI1 SNX13 chr7 17979907 - GLCCI1 chr7 8043538 + Exonic hg19 BLCA TCGA-FD-A6TG-01A 3 4 Out-of-frame Intra-chr p21.1 p21.3 Seq+ 72983 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX13-STAP2 SNX13 chr7 17979907 - STAP2 chr19 4334041 - Exonic hg19 BRCA TCGA-B6-A0I9-01A 112 100 In-Frame Inter-chr p21.1 p13.3 Seq+ 72984 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX14-EYS SNX14 chr6 86303297 - EYS chr6 66205886 - Exonic hg19 BRCA TCGA-D8-A73W-01A 12 9 CDS-5'UTR Intra-chr q14.3 q12 Seq+ 72985 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX14-NKAIN2 SNX14 chr6 86303297 - NKAIN2 chr6 124604151 + Exonic hg19 BRCA TCGA-EW-A1IX-01A 5 4 Out-of-frame Intra-chr q14.3 q22.31 Seq+ 72986 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX14-SYNCRIP SNX14 chr6 86303297 - SYNCRIP chr6 86325065 - Exonic hg19 HNSC TCGA-CV-6962-01A 38 14 In-Frame Intra-chr q14.3 q14.3 Seq+ 72987 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX15-C11orf85 SNX15 chr11 64795108 - C11orf85 chr11 64708118 - Exonic hg19 LGG TCGA-HT-7686-01A 68 64 Out-of-frame Intra-chr q13.1 Seq+ 72988 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX15-NAALADL1 SNX15 chr11 64795108 - NAALADL1 chr11 64822210 - Exonic hg19 LUSC TCGA-22-5473-01A 4 1 In-Frame Intra-chr q13.1 q13.1 72989 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX16-PCCA SNX16 chr8 82754357 - PCCA chr13 100992411 + Exonic hg19 BRCA TCGA-AO-A03V-01A 38 1 5'UTR-CDS Inter-chr q21.13 q32.3 Seq+ 72990 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX18-ANKRD55 SNX18 chr5 53815403 - ANKRD55 chr5 55479461 - Exonic hg19 LUAD TCGA-MP-A4T8-01A 2 1 In-Frame Intra-chr q11.2 q11.2 72991 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX18-WDR93 SNX18 chr5 53815403 - WDR93 chr15 90270388 + Exonic hg19 BRCA TCGA-BH-A18V-01A 3 2 In-Frame Inter-chr q11.2 q26.1 Seq+ 72992 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX19-RRP12 SNX19 chr11 130784161 - RRP12 chr10 99130553 - Exonic hg19 UCEC TCGA-A5-A1OH-01A 25 9 In-Frame Inter-chr q25 q24.1 Seq+ 72993 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX19-USP28 SNX19 chr11 130784161 - USP28 chr11 113675768 - Exonic hg19 PRAD TCGA-HC-7232-01A 68 49 In-Frame Intra-chr q25 q23.2 Seq+ 72994 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX24-SNCAIP SNX24 chr5 122181388 - SNCAIP chr5 121726784 + Exonic hg19 BRCA TCGA-JL-A3YW-01A 2 4 CDS-5'UTR Intra-chr q23.2 q23.2 Seq+ 72995 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX27-ADAR SNX27 chr1 151611595 - ADAR chr1 154575102 - Exonic hg19 BRCA TCGA-A2-A04X-01A 25 10 In-Frame Intra-chr q21.3 q21.3 Seq+ 72996 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX29-CIITA SNX29 chr16 12172772 - CIITA chr16 10989139 + Exonic hg19 CESC TCGA-C5-A1MJ-01A 14 5 In-Frame Intra-chr p13.13 p13.13 Seq+ 72997 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX29-CLEC16A SNX29 chr16 12571716 - CLEC16A chr16 11272192 + Exonic hg19 LUAD TCGA-97-7547-01A 3 1 Out-of-frame Intra-chr p13.13 p13.13 72998 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX29-CLEC16A SNX29 chr16 12172772 - CLEC16A chr16 11114050 + Exonic hg19 UCEC TCGA-A5-A7WJ-01A 4 1 In-Frame Intra-chr p13.13 p13.13 72999 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX29-HS3ST4 SNX29 chr16 12223615 - HS3ST4 chr16 26146933 + Exonic hg19 SKCM TCGA-EE-A29X-06A 2 6 In-Frame Intra-chr p13.13 p12.1 Seq+ 73000 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX29-LITAF SNX29 chr16 12371893 - LITAF chr16 11650591 - Exonic hg19 DLBC TCGA-FF-8043-01A 21 17 CDS-5'UTR Intra-chr p13.13 p13.13 Tumor suppressor gene Seq+ 73001 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX29-TNFRSF17 SNX29 chr16 12172772 - TNFRSF17 chr16 12060052 + Exonic hg19 LUAD TCGA-69-7979-01A 9 5 In-Frame Intra-chr p13.13 p13.13 Seq+ 73002 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX29-TNFRSF17 SNX29 chr16 12155503 - TNFRSF17 chr16 12060052 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 4 2 In-Frame Intra-chr p13.13 p13.13 Seq+ 73003 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX30-ALDOB SNX30 chr9 115626679 - ALDOB chr9 104184186 - Exonic hg19 PRAD TCGA-XQ-A8TA-01A 2 5 In-Frame Intra-chr q32 q31.1 Seq+ 73004 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX30-CNTLN SNX30 chr9 115513437 - CNTLN chr9 17484293 + Exonic hg19 HNSC TCGA-DQ-7589-01A 6 5 In-Frame Intra-chr q32 p22.2 Seq+ 73005 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX30-DENND1A SNX30 chr9 115580095 - DENND1A chr9 126220176 - Exonic hg19 BRCA TCGA-E2-A15M-01A 5 9 In-Frame Intra-chr q32 q33.3 Seq+ 73006 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX30-KIAA1958 SNX30 chr9 115580095 - KIAA1958 chr9 115380151 + Exonic hg19 LUSC TCGA-56-7822-01A 9 3 Out-of-frame Intra-chr q32 q32 Seq+ 73007 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX30-KIAA1958 SNX30 chr9 115580095 - KIAA1958 chr9 115380151 + Exonic hg19 COAD TCGA-5M-AAT4-01A 2 2 Out-of-frame Intra-chr q32 q32 Seq+ 73008 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX30-KIAA1958 SNX30 chr9 115580095 - KIAA1958 chr9 115407930 + Exonic hg19 BLCA TCGA-FD-A3B5-01A 6 6 Out-of-frame Intra-chr q32 q32 Seq+ 73009 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX30-KIAA1958 SNX30 chr9 115580095 - KIAA1958 chr9 115380151 + Exonic hg19 PRAD TCGA-HC-8261-01A 3 2 Out-of-frame Intra-chr q32 q32 Seq+ 73010 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX30-KIAA1958 SNX30 chr9 115513437 - KIAA1958 chr9 115407930 + Exonic hg19 ESCA TCGA-L5-A4OQ-01A 2 2 Out-of-frame Intra-chr q32 q32 Seq+ 73011 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX30-KIAA1958 SNX30 chr9 115580095 - KIAA1958 chr9 115380151 + Exonic hg19 PCPG TCGA-QR-A70I-01A 2 2 Out-of-frame Intra-chr q32 q32 Seq+ 73012 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX30-LPAR1 SNX30 chr9 115513437 - LPAR1 chr9 113638002 - Exonic hg19 LGG TCGA-DU-5853-01A 3 2 Out-of-frame Intra-chr q32 q31.3 Seq+ 73013 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX30-PXT1 SNX30 chr9 115600977 - PXT1 chr6 36393868 - Exonic hg19 BLCA TCGA-BL-A0C8-01A 20 8 CDS-5'UTR Inter-chr q32 p21.31 Seq+ 73014 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX30-SEC16A SNX30 chr9 115567247 - SEC16A chr9 139338352 - Exonic hg19 SARC TCGA-WK-A8XS-01A 3 7 In-Frame Intra-chr q32 q34.3 Seq+ 73015 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX31-PABPC1 SNX31 chr8 101642555 - PABPC1 chr8 101698522 - Exonic hg19 BLCA TCGA-G2-A3VY-01A 6 3 CDS-3'UTR Intra-chr q22.3 q22.3 Seq+ 73016 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX32-PLCB3 SNX32 chr11 65601572 - PLCB3 chr11 64033358 + Exonic hg19 SKCM TCGA-D3-A1Q9-06A 5 1 Out-of-frame Intra-chr q13.1 q13.1 Tumor suppressor gene 73017 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX5-PCSK2 SNX5 chr20 17933231 - PCSK2 chr20 17338972 + Exonic hg19 SKCM TCGA-ER-A19L-06A 49 33 In-Frame Intra-chr p11.23 p12.1 Seq+ 73018 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX6-MIPOL1 SNX6 chr14 35044962 - MIPOL1 chr14 37892060 + Exonic hg19 LUAD TCGA-44-A479-01A 4 4 In-Frame Intra-chr q13.1 q13.3 Seq+ 73019 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX8-KDELR2 SNX8 chr7 2353963 - KDELR2 chr7 6502806 - Exonic hg19 LUSC TCGA-39-5035-01A 7 5 In-Frame Intra-chr p22.3 p22.1 Seq+ 73020 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX9-DAP SNX9 chr6 158323077 - DAP chr5 10683683 - Exonic hg19 BRCA TCGA-A8-A09X-01A 10 22 In-Frame Inter-chr q25.3 p15.2 Seq+ 73021 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX9-ZDHHC14 SNX9 chr6 158353304 - ZDHHC14 chr6 157963617 + Exonic hg19 UCEC TCGA-AP-A5FX-01A 2 1 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 73022 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SNX9-ZDHHC14 SNX9 chr6 158318030 - ZDHHC14 chr6 158014020 + Exonic hg19 STAD TCGA-FP-8631-01A 8 14 In-Frame Intra-chr q25.3 q25.3 Seq+ 73023 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOAT1-AGAP2 SOAT1 chr1 179316832 - AGAP2 chr12 58129210 - Exonic hg19 SARC TCGA-DX-A2J0-01A 10 2 Out-of-frame Inter-chr q25.2 q14.1 Seq+ 73024 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOBP-ABCA9 SOBP chr6 107854814 - ABCA9 chr17 67008224 - Exonic hg19 BRCA TCGA-D8-A147-01A 9 4 In-Frame Inter-chr q21 q24.2 Seq+ 73025 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOBP-AIM1 SOBP chr6 107956673 - AIM1 chr6 106899569 + Exonic hg19 GBM TCGA-19-5960-01A 6 2 Out-of-frame Intra-chr q21 Seq+ 73026 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOCS5-ADCY2 SOCS5 chr2 46926588 - ADCY2 chr5 7520851 + Exonic hg19 PCPG TCGA-W2-A7HC-01A 12 8 5'UTR-CDS Inter-chr p21 p15.31 Seq+ 73027 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOCS5-SLC8A1 SOCS5 chr2 46926588 - SLC8A1 chr2 40680489 - Exonic hg19 LIHC TCGA-DD-AAW0-01A 2 6 Out-of-frame Intra-chr p21 p22.1 Seq+ 73028 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOCS6-CTDP1 SOCS6 chr18 67956326 - CTDP1 chr18 77455225 + Exonic hg19 ESCA TCGA-IG-A3I8-01A 2 22 5'UTR-5'UTR Intra-chr q22.2 Seq+ 73029 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOCS6-GLIS3 SOCS6 chr18 67956326 - GLIS3 chr9 3932470 - Exonic hg19 UCEC TCGA-JU-AAVI-01A 2 1 5'UTR-CDS Inter-chr q22.2 p24.2 Transcription factor 73030 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOCS6-PMS1 SOCS6 chr18 67956326 - PMS1 chr2 190738222 + Exonic hg19 SARC TCGA-WK-A8Y0-01A 6 9 5'UTR-CDS Inter-chr q22.2 q32.2 Oncogene Seq+ 73031 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOCS7-C17orf37 SOCS7 chr17 36523933 - C17orf37 chr17 37886544 - Exonic hg19 READ TCGA-EI-6509-01A 852 548 Out-of-frame Intra-chr q12 73032 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOCS7-FLOT2 SOCS7 chr17 36533668 - FLOT2 chr17 27216044 - Exonic hg19 BRCA TCGA-A1-A0SM-01A 29 8 In-Frame Intra-chr q12 q11.2 Seq+ 73033 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOCS7-MAPT SOCS7 chr17 36508915 - MAPT chr17 44101322 + Exonic hg19 BLCA TCGA-HQ-A2OF-01A 53 41 Out-of-frame Intra-chr q12 Seq+ 73034 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOCS7-PHACTR1 SOCS7 chr17 36517658 - PHACTR1 chr6 12933865 + Exonic hg19 BRCA TCGA-A8-A0AD-01A 2 1 Out-of-frame Inter-chr q12 73035 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOCS7-PLXDC1 SOCS7 chr17 36533668 - PLXDC1 chr17 37265644 - Exonic hg19 PAAD TCGA-2L-AAQE-01A 4 4 Out-of-frame Intra-chr q12 q12 Seq+ 73036 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOCS7-RSF1 SOCS7 chr17 36533668 - RSF1 chr11 77475734 - Exonic hg19 LUAD TCGA-78-7150-01A 16 8 In-Frame Inter-chr q12 q14.1 Seq+ 73037 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOCS7-SRCIN1 SOCS7 chr17 36533668 - SRCIN1 chr17 36705446 - Exonic hg19 BRCA TCGA-A8-A07I-01A 8 6 In-Frame Intra-chr q12 q12 Seq+ 73038 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOD1-TYK2 SOD1 chr21 33040986 - TYK2 chr19 10491352 - Exonic hg19 BRCA TCGA-D8-A1JK-01A 2 16 Out-of-frame Inter-chr q22.11 p13.2 TK:JakA 73039 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOLH-WHSC1L1 SOLH chr16 583998 - WHSC1L1 chr8 38205733 - Exonic hg19 LUSC TCGA-21-1081-01A 8 33 5'UTR-5'UTR Inter-chr p11.23 Tumor suppressor gene Seq+ 73040 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SON-C10orf11 SON chr21 34932081 - C10orf11 chr10 78084159 + Exonic hg19 BRCA TCGA-B6-A0IH-01A 6 9 In-Frame Inter-chr q22.11 Transcription factor Seq+ 73041 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SON-IL10RB SON chr21 34932081 - IL10RB chr21 34668489 + Exonic hg19 STAD TCGA-BR-8289-01A 4 37 In-Frame Intra-chr q22.11 Transcription factor q22.11 Seq+ 73042 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SORBS1-FAM135B SORBS1 chr10 97106163 - FAM135B chr8 139255311 - Exonic hg19 SARC TCGA-3B-A9HY-01A 87 69 In-Frame Inter-chr q24.1 q24.23 Seq+ 73043 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SORBS2-AIF1 SORBS2 chr4 186605908 - AIF1 chr6 31584121 + Exonic hg19 BRCA TCGA-AR-A24Z-01A 26 17 In-Frame Inter-chr q35.1 Tumor suppressor gene Seq+ 73044 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SORBS2-ARHGAP27 SORBS2 chr4 186877350 - ARHGAP27 chr17 43475413 - Exonic hg19 PRAD TCGA-HC-7748-01A 5 3 5'UTR-CDS Inter-chr q35.1 Seq+ 73045 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SORBS2-ELK4 SORBS2 chr4 186732818 - ELK4 chr1 205567777 - Exonic hg19 PRAD TCGA-J4-8198-01A 12 8 5'UTR-3'UTR Inter-chr q35.1 q32.1 Transcription factor Seq+ 73046 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SORBS2-MRPS35 SORBS2 chr4 186570621 - MRPS35 chr12 27908114 + Exonic hg19 PRAD TCGA-4L-AA1F-01A 40 34 Out-of-frame Inter-chr q35.1 p11.22 Seq+ 73047 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SORBS2-RP11-487E13.1 SORBS2 chr4 186532934 - RP11-487E13.1 chr4 178163857 - Exonic hg19 LUAD TCGA-49-4507-01A 3 3 Out-of-frame Intra-chr q35.1 73048 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SORBS3-XPO7 SORBS3 chr8 22412493 - XPO7 chr8 21824368 + Exonic hg19 STAD TCGA-CG-4443-01A 2 6 Out-of-frame Intra-chr p21.3 p21.3 73049 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SORCS2-SH3TC1 SORCS2 chr4 7194853 - SH3TC1 chr4 8242425 + Exonic hg19 BLCA TCGA-DK-A3IS-01A 5 2 In-Frame Intra-chr p16.1 p16.1 73050 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SORD-TRIM69 SORD chr15 45315547 - TRIM69 chr15 45059429 + Exonic hg19 STAD TCGA-BR-4366-01A 15 21 Out-of-frame Intra-chr q21.1 Seq+ 73051 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SORL1-CEP164 SORL1 chr11 121367758 - CEP164 chr11 117251330 + Exonic hg19 OV TCGA-VG-A8LO-01A 29 165 In-Frame Intra-chr q24.1 q23.3 Seq+ 73052 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SORL1-DDX6 SORL1 chr11 121403261 - DDX6 chr11 118657227 - Exonic hg19 BRCA TCGA-AR-A2LL-01A 2 2 CDS-5'UTR Intra-chr q24.1 q23.3 Seq+ 73053 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SORL1-GLT8D1 SORL1 chr11 121483541 - GLT8D1 chr3 52731950 - Exonic hg19 PRAD TCGA-EJ-8472-01A 2 3 In-Frame Inter-chr q24.1 p21.1 73054 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SORL1-LMNA SORL1 chr11 121367758 - LMNA chr1 156104194 + Exonic hg19 LGG TCGA-TM-A84J-01A 12 4 In-Frame Inter-chr q24.1 q22 73055 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SORL1-RHBG SORL1 chr11 121367758 - RHBG chr1 156352539 + Exonic hg19 LGG TCGA-TM-A84J-01A 4 5 Out-of-frame Inter-chr q24.1 q22 Seq+ 73056 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SORL1-SC5DL SORL1 chr11 121393698 - SC5DL chr11 121177766 + Exonic hg19 OV TCGA-24-1431-01A 44 14 In-Frame Intra-chr q24.1 Seq+ 73057 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SORL1-SYTL2 SORL1 chr11 121466481 - SYTL2 chr11 85428573 - Exonic hg19 LUAD TCGA-38-4632-01A 2 8 In-Frame Intra-chr q24.1 q14.1 Seq+ 73058 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SORL1-TBCEL SORL1 chr11 121348952 - TBCEL chr11 120957487 + Exonic hg19 OV TCGA-61-2094-01A 3 12 Out-of-frame Intra-chr q24.1 q23.3 Seq+ 73059 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SORL1-TECTA SORL1 chr11 121360819 - TECTA chr11 121058541 + Exonic hg19 OV TCGA-13-1487-01A 18 11 In-Frame Intra-chr q24.1 q23.3 Seq+ 73060 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SORL1-TECTA SORL1 chr11 121403261 - TECTA chr11 121058541 + Exonic hg19 BRCA TCGA-E9-A22G-01A 242 163 In-Frame Intra-chr q24.1 q23.3 Seq+ 73061 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOS1-CDKL4 SOS1 chr2 39347477 - CDKL4 chr2 39417643 - Exonic hg19 LUSC TCGA-94-8491-01A 7 1 Out-of-frame Intra-chr p22.1 p22.1 CMGC:CDKL Seq+ 73062 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOS1-CDKL4 SOS1 chr2 39347477 - CDKL4 chr2 39417643 - Exonic hg19 UCEC TCGA-PG-A915-01A 8 1 Out-of-frame Intra-chr p22.1 p22.1 CMGC:CDKL Seq+ 73063 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOS1-DTL SOS1 chr2 39249711 - DTL chr1 212251515 + Exonic hg19 UCEC TCGA-AX-A3FW-01A 5 2 Out-of-frame Inter-chr p22.1 q32.3 Seq+ 73064 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOS1-MAP4K3 SOS1 chr2 39283843 - MAP4K3 chr2 39605264 - Exonic hg19 THCA TCGA-EL-A3H8-01A 17 12 In-Frame Intra-chr p22.1 p22.1 Seq+ 73065 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOS1-MAP4K3 SOS1 chr2 39278285 - MAP4K3 chr2 39605264 - Exonic hg19 TGCT TCGA-XE-AANR-01A 3 3 In-Frame Intra-chr p22.1 p22.1 Seq+ 73066 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOS2-NRXN3 SOS2 chr14 50600841 - NRXN3 chr14 79423585 + Exonic hg19 SKCM TCGA-D9-A4Z5-01A 2 1 Out-of-frame Intra-chr q21.3 q24.3 73067 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOS2-POLN SOS2 chr14 50697915 - POLN chr4 2176478 - Exonic hg19 UCS TCGA-NA-A5I1-01A 13 10 In-Frame Inter-chr q21.3 p16.3 Seq+ 73068 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOX10-FAM168A SOX10 chr22 38373874 - FAM168A chr11 73122581 - Exonic hg19 LGG TCGA-DH-5140-01A 235 165 In-Frame Inter-chr q13.1 Transcription factor q13.4 Seq+ 73069 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOX13-MERTK SOX13 chr1 204083733 - MERTK chr2 112725714 + Exonic hg19 BRCA TCGA-AN-A0FT-01A 2 3 In-Frame Inter-chr q32.1 Transcription factor q13 Seq+ 73070 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOX4-FOXP1 SOX4 chr6 21598847 - FOXP1 chr3 71007472 - Exonic hg19 TGCT TCGA-2G-AAF4-01A 2 4 Out-of-frame Inter-chr p22.3 Transcription factor p13 Oncogene Tumor suppressor gene Transcription factor 73071 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOX5-AC007621.1 SOX5 chr12 23757321 - AC007621.1 chr12 12509739 - Exonic hg19 LGG TCGA-DU-7007-01A 13 14 Out-of-frame Intra-chr p12.1 Transcription factor p13.2 73072 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOX5-GUCY2C SOX5 chr12 23818378 - GUCY2C chr12 14766225 - Exonic hg19 SARC TCGA-DX-AB2Q-01A 2 1 Out-of-frame Intra-chr p12.1 Transcription factor p12.3 Tumor suppressor gene 73073 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOX5-IFLTD1 SOX5 chr12 23793746 - IFLTD1 chr12 25702480 - Exonic hg19 UCEC TCGA-A5-A1OH-01A 2 1 Out-of-frame Intra-chr p12.1 Transcription factor Tumor suppressor gene 73074 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOX5-MANSC1 SOX5 chr12 23757321 - MANSC1 chr12 12496348 - Exonic hg19 LGG TCGA-DU-7007-01A 14 5 CDS-5'UTR Intra-chr p12.1 Transcription factor Seq+ 73075 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOX5-RP11-176H8.1 SOX5 chr12 23887618 - RP11-176H8.1 chr14 31922550 - Exonic hg19 BRCA TCGA-C8-A27B-01A 2 2 Out-of-frame Inter-chr p12.1 Transcription factor 73076 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOX5-SPSB2 SOX5 chr12 23998917 - SPSB2 chr12 6991451 - Exonic hg19 SARC TCGA-FX-A3TO-01A 2 8 CDS-5'UTR Intra-chr p12.1 Transcription factor p13.31 Seq+ 73077 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOX6-BTBD10 SOX6 chr11 16339992 - BTBD10 chr11 13427403 - Exonic hg19 KICH TCGA-KL-8339-01A 14 9 In-Frame Intra-chr p15.2 Transcription factor p15.3 Seq+ 73078 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOX6-C20orf24 SOX6 chr11 16007750 - C20orf24 chr20 35238004 + Exonic hg19 STAD TCGA-VQ-A91S-01A 4 51 In-Frame Inter-chr p15.2 Transcription factor q11.23 Seq+ 73079 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOX6-EYS SOX6 chr11 16205432 - EYS chr6 65016975 - Exonic hg19 CESC TCGA-VS-A8QC-01A 3 1 In-Frame Inter-chr p15.2 Transcription factor q12 73080 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOX6-GALNTL4 SOX6 chr11 16339992 - GALNTL4 chr11 11400811 - Exonic hg19 BRCA TCGA-AR-A24Q-01A 8 10 In-Frame Intra-chr p15.2 Transcription factor Seq+ 73081 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOX6-PTPRJ SOX6 chr11 16362558 - PTPRJ chr11 48134299 + Exonic hg19 LGG TCGA-FG-5963-01A 9 15 Out-of-frame Intra-chr p15.2 Transcription factor p11.2 Tumor suppressor gene Seq+ 73082 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SOX6-PTPRJ SOX6 chr11 16362558 - PTPRJ chr11 48134299 + Exonic hg19 LGG TCGA-FG-5963-02A 28 7 Out-of-frame Intra-chr p15.2 Transcription factor p11.2 Tumor suppressor gene Seq+ 73083 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SP1-ATF7 SP1 chr12 53777406 - ATF7 chr12 53901811 - Exonic hg19 SARC TCGA-DX-AB2G-01A 85 36 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 Transcription factor Seq+ 73084 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SP1-C12orf10 SP1 chr12 53803345 - C12orf10 chr12 53699692 + Exonic hg19 OV TCGA-13-A5FT-01A 5 8 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 Seq+ 73085 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SP1-IGFBP6 SP1 chr12 53777406 - IGFBP6 chr12 53494496 + Exonic hg19 UCS TCGA-N7-A59B-01A 13 8 In-Frame Intra-chr q13.13 Transcription factor q13.13 Seq+ 73086 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SP1-NPFF SP1 chr12 53777406 - NPFF chr12 53900926 - Exonic hg19 SARC TCGA-DX-AB2G-01A 76 81 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 Seq+ 73087 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SP1-WNT9B SP1 chr12 53777406 - WNT9B chr17 44949883 + Exonic hg19 UCS TCGA-NF-A4WU-01A 3 1 Out-of-frame Inter-chr q13.13 Transcription factor Seq+ 73088 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SP100-GIGYF2 SP100 chr2 231281043 - GIGYF2 chr2 233651860 + Exonic hg19 SARC TCGA-DX-A3LY-01B 2 1 Out-of-frame Intra-chr q37.1 Tumor suppressor gene Transcription factor q37.1 73089 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SP140L-PDE6D SP140L chr2 231256944 - PDE6D chr2 232603912 - Exonic hg19 HNSC TCGA-QK-A8Z9-01B 12 22 Out-of-frame Intra-chr q37.1 Transcription factor q37.1 Seq+ 73090 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SP3-CYBRD1 SP3 chr2 174828489 - CYBRD1 chr2 172409856 + Exonic hg19 SARC TCGA-DX-A1KY-01A 8 49 In-Frame Intra-chr q31.1 Transcription factor q31.1 Seq+ 73091 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SP3-GPR155 SP3 chr2 174819601 - GPR155 chr2 175318569 - Exonic hg19 OV TCGA-09-1662-01A 5 9 In-Frame Intra-chr q31.1 Transcription factor q31.1 Seq+ 73092 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SP3-OLA1 SP3 chr2 174819601 - OLA1 chr2 175006728 - Exonic hg19 BRCA TCGA-AO-A12F-01A 25 23 In-Frame Intra-chr q31.1 Transcription factor q31.1 Seq+ 73093 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SP3-OLA1 SP3 chr2 174819601 - OLA1 chr2 175006728 - Exonic hg19 CESC TCGA-DS-A3LQ-01A 9 11 In-Frame Intra-chr q31.1 Transcription factor q31.1 Seq+ 73094 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SP3-SCRN3 SP3 chr2 174819601 - SCRN3 chr2 175287613 + Exonic hg19 STAD TCGA-BR-A4PD-01A 2 35 In-Frame Intra-chr q31.1 Transcription factor q31.1 Seq+ 73095 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SP3-SLC8A1 SP3 chr2 174819601 - SLC8A1 chr2 40342769 - Exonic hg19 PRAD TCGA-ZG-A9MC-01A 15 15 In-Frame Intra-chr q31.1 Transcription factor p22.1 Seq+ 73096 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SP3-STK39 SP3 chr2 174777798 - STK39 chr2 169038600 - Exonic hg19 LUSC TCGA-34-5236-01A 7 6 In-Frame Intra-chr q31.1 Transcription factor q24.3 Seq+ 73097 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SP4-GPNMB SP4 chr7 21468410 - GPNMB chr7 23313140 + Exonic hg19 GBM TCGA-28-1747-01C 63 4 Out-of-frame Intra-chr p15.3 Transcription factor p15.3 Seq+ 73098 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPAG1-ANGPT1 SPAG1 chr8 101245765 - ANGPT1 chr8 108359325 - Exonic hg19 SARC TCGA-DX-AB2Z-01A 6 1 In-Frame Intra-chr q22.2 q23.1 73099 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPAG1-STK3 SPAG1 chr8 101245765 - STK3 chr8 99719539 - Exonic hg19 LUSC TCGA-68-8250-01A 2 4 In-Frame Intra-chr q22.2 q22.2 Seq+ 73100 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPAG16-CUL3 SPAG16 chr2 214162081 - CUL3 chr2 225346795 - Exonic hg19 LUSC TCGA-O2-A52V-01A 43 20 In-Frame Intra-chr q34 q36.2 Seq+ 73101 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPAG17-LRSAM1 SPAG17 chr1 118550667 - LRSAM1 chr9 130221282 + Exonic hg19 MESO TCGA-3H-AB3S-01A 5 1 In-Frame Inter-chr p12 q33.3 73102 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPAG17-PCF11 SPAG17 chr1 118727694 - PCF11 chr11 82872369 + Exonic hg19 BRCA TCGA-AR-A1AU-01A 7 6 In-Frame Inter-chr p12 q14.1 Seq+ 73103 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPAG17-RABGAP1L SPAG17 chr1 118693166 - RABGAP1L chr1 174926594 + Exonic hg19 BRCA TCGA-E9-A1NI-01A 8 5 In-Frame Intra-chr p12 q25.1 Seq+ 73104 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPAG5-BLMH SPAG5 chr17 26925528 - BLMH chr17 28576186 - Exonic hg19 BRCA TCGA-A2-A25B-01A 83 69 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 73105 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPAG5-C17orf63 SPAG5 chr17 26918716 - C17orf63 chr17 27093725 - Exonic hg19 BRCA TCGA-A7-A13D-01A 2 3 Out-of-frame Intra-chr q11.2 73106 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPAG5-SDF2 SPAG5 chr17 26918716 - SDF2 chr17 26976294 - Exonic hg19 SARC TCGA-FX-A3TO-01A 74 37 In-Frame Intra-chr q11.2 q11.2 Seq+ 73107 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPAG5-SLC47A1 SPAG5 chr17 26912882 - SLC47A1 chr17 19445706 + Exonic hg19 BRCA TCGA-OL-A5RZ-01A 29 13 In-Frame Intra-chr q11.2 p11.2 Seq+ 73108 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPAG6-PLXDC2 SPAG6 chr10 22657607 - PLXDC2 chr10 20568632 + Exonic hg19 BLCA TCGA-DK-A2I1-01A 7 6 Out-of-frame Intra-chr p12.2 p12.31 Seq+ 73109 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPAG7-CAMTA2 SPAG7 chr17 4871015 - CAMTA2 chr17 4886338 - Exonic hg19 LUSC TCGA-22-4593-01A 2 2 Out-of-frame Intra-chr p13.2 p13.2 Transcription factor Seq+ 73110 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPAG7-CAMTA2 SPAG7 chr17 4871015 - CAMTA2 chr17 4886338 - Exonic hg19 BRCA TCGA-AR-A0TP-01A 3 2 Out-of-frame Intra-chr p13.2 p13.2 Transcription factor Seq+ 73111 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPAG7-DNAH17 SPAG7 chr17 4871015 - DNAH17 chr17 76471915 - Exonic hg19 HNSC TCGA-P3-A5QE-01A 9 5 Out-of-frame Intra-chr p13.2 q25.3 Seq+ 73112 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPAG9-CLYBL SPAG9 chr17 49197715 - CLYBL chr13 100543572 + Exonic hg19 LGG TCGA-DB-5275-01A 19 7 In-Frame Inter-chr q21.33 q32.3 Seq+ 73113 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPAG9-FAM117A SPAG9 chr17 49197715 - FAM117A chr17 47797798 - Exonic hg19 BRCA TCGA-E9-A1RF-01A 63 38 In-Frame Intra-chr q21.33 q21.33 Seq+ 73114 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPAG9-MBTD1 SPAG9 chr17 49156945 - MBTD1 chr17 49258055 - Exonic hg19 OV TCGA-24-1557-01A 4 1 In-Frame Intra-chr q21.33 q21.33 Seq+ 73115 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPAG9-MBTD1 SPAG9 chr17 49156945 - MBTD1 chr17 49258055 - Exonic hg19 STAD TCGA-CG-4443-01A 18 18 In-Frame Intra-chr q21.33 q21.33 Seq+ 73116 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPAG9-PCMT1 SPAG9 chr17 49124736 - PCMT1 chr6 150092298 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 10 4 Out-of-frame Inter-chr q21.33 q25.1 Seq+ 73117 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPAG9-RDX SPAG9 chr17 49156945 - RDX chr11 110102758 - Exonic hg19 SKCM TCGA-ER-A19N-06A 74 81 Out-of-frame Inter-chr q21.33 q22.3 Seq+ 73118 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPAG9-SKAP1 SPAG9 chr17 49156945 - SKAP1 chr17 46266862 - Exonic hg19 BRCA TCGA-EW-A1OV-01A 45 10 In-Frame Intra-chr q21.33 q21.32 Seq+ 73119 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPAG9-TEKT1 SPAG9 chr17 49059885 - TEKT1 chr17 6704262 - Exonic hg19 LIHC TCGA-BC-A10T-01A 51 66 In-Frame Intra-chr q21.33 p13.1 Seq+ 73120 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPAG9-TRIM37 SPAG9 chr17 49057107 - TRIM37 chr17 57168701 - Exonic hg19 ESCA TCGA-V5-A7RE-01A 14 21 Out-of-frame Intra-chr q21.33 q22 Seq+ 73121 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPAST-LBH SPAST chr2 32289315 - LBH chr2 30480299 + Exonic hg19 LGG TCGA-HT-A74J-01A 3 1 Out-of-frame Intra-chr p22.3 p23.1 73122 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPATA13-PRRC2C SPATA13 chr13 24874613 - PRRC2C chr1 171493960 + Exonic hg19 BRCA TCGA-A8-A08J-01A 14 3 Out-of-frame Inter-chr q12.12 q24.3 Seq+ 73123 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPATA13-TNFRSF19 SPATA13 chr13 24735071 - TNFRSF19 chr13 24164289 + Exonic hg19 READ TCGA-DC-4745-01A 101 81 5'UTR-5'UTR Intra-chr q12.12 q12.12 Seq+ 73124 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPATA18-EXOC1 SPATA18 chr4 52917957 - EXOC1 chr4 56768510 + Exonic hg19 LUSC TCGA-22-4591-01A 3 5 In-Frame Intra-chr q12 q12 Seq+ 73125 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPATA2-C20orf43 SPATA2 chr20 48531917 - C20orf43 chr20 55088371 + Exonic hg19 COAD TCGA-G4-6315-01A 17 4 5'UTR-CDS Intra-chr q13.13 73126 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPATA20-EPN3 SPATA20 chr17 48625979 - EPN3 chr17 48619205 + Exonic hg19 LIHC TCGA-WJ-A86L-01A 46 14 In-Frame Intra-chr q21.33 q21.33 73127 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPATA2L-FANCA SPATA2L chr16 89764603 - FANCA chr16 89811479 - Exonic hg19 LUSC TCGA-NC-A5HH-01A 8 5 Out-of-frame Intra-chr q24.3 q24.3 Oncogene Seq+ 73128 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPATA5-CENPE SPATA5 chr4 123900541 - CENPE chr4 104098203 - Exonic hg19 BRCA TCGA-E2-A15K-01A 2 1 In-Frame Intra-chr q28.1 q24 Seq+ 73129 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPATA5-MMRN1 SPATA5 chr4 123868643 - MMRN1 chr4 90872756 + Exonic hg19 BRCA TCGA-EW-A6SA-01A 3 2 In-Frame Intra-chr q28.1 q22.1 Seq+ 73130 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPATA6-BEND5 SPATA6 chr1 48771459 - BEND5 chr1 49193715 - Exonic hg19 LUAD TCGA-78-7154-01A 5 6 Out-of-frame Intra-chr p33 p33 Seq+ 73131 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPATA6-CRYZ SPATA6 chr1 48937630 - CRYZ chr1 75190518 - Exonic hg19 SKCM TCGA-EB-A551-01A 3 1 CDS-5'UTR Intra-chr p33 p31.1 Seq+ 73132 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPATA6-MAD2L2 SPATA6 chr1 48917224 - MAD2L2 chr1 11737005 - Exonic hg19 BRCA TCGA-E9-A22A-01A 7 7 Out-of-frame Intra-chr p33 p36.22 Seq+ 73133 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPATA6-PIK3R3 SPATA6 chr1 48917224 - PIK3R3 chr1 46543285 - Exonic hg19 TGCT TCGA-XY-A8S2-01A 2 2 Out-of-frame Intra-chr p33 p34.1 Seq+ 73134 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPATA7-GABRA3 SPATA7 chr14 88904247 - GABRA3 chrX 151337035 - Exonic hg19 BRCA TCGA-A7-A4SA-01A 9 1 Out-of-frame Inter-chr q31.3 q28 73135 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPATA7-KTN1 SPATA7 chr14 88852181 - KTN1 chr14 56078737 + Exonic hg19 SARC TCGA-SI-A71O-06A 6 7 CDS-5'UTR Intra-chr q31.3 q22.3 73136 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPATS2-PPM1H SPATS2 chr12 49854820 - PPM1H chr12 63226059 - Exonic hg19 PRAD TCGA-V1-A8X3-01A 6 5 Out-of-frame Intra-chr q13.12 q14.2 Seq+ 73137 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPATS2-SENP1 SPATS2 chr12 49765073 - SENP1 chr12 48465504 - Exonic hg19 STAD TCGA-BR-4367-01A 9 7 5'UTR-CDS Intra-chr q13.12 q13.11 Seq+ 73138 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPATS2-TSPAN8 SPATS2 chr12 49908396 - TSPAN8 chr12 71533628 - Exonic hg19 ACC TCGA-OR-A5KT-01A 6 3 Out-of-frame Intra-chr q13.12 q21.1 Seq+ 73139 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPC25-NEK11 SPC25 chr2 169745736 - NEK11 chr3 130851589 + Exonic hg19 LUSC TCGA-37-A5EL-01A 4 2 Out-of-frame Inter-chr q22.1 Other:NEK 73140 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPDEF-C6orf106 SPDEF chr6 34511797 - C6orf106 chr6 34574681 - Exonic hg19 BRCA TCGA-OL-A66P-01A 7 4 In-Frame Intra-chr p21.31 Transcription factor p21.31 73141 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPECC1-HM13 SPECC1 chr17 20135718 - HM13 chr20 30115287 + Exonic hg19 UCEC TCGA-PG-A914-01A 4 8 Out-of-frame Inter-chr p11.2 q11.21 Seq+ 73142 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPECC1-STAMBP SPECC1 chr17 20163607 - STAMBP chr2 74100479 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 23 18 Out-of-frame Inter-chr p11.2 p13.1 Seq+ 73143 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPECC1-TMEM11 SPECC1 chr17 20059549 - TMEM11 chr17 21102153 - Exonic hg19 BRCA TCGA-A2-A0EY-01A 7 13 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 73144 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPECC1L-BCL2L13 SPECC1L chr22 24666951 - BCL2L13 chr22 18185009 + Exonic hg19 LUAD TCGA-44-6774-01A 6 3 5'UTR-CDS Intra-chr q11.23 q11.21 Seq+ 73145 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPECC1L-CABIN1 SPECC1L chr22 24765288 - CABIN1 chr22 24479181 + Exonic hg19 STAD TCGA-BR-4357-01A 35 13 In-Frame Intra-chr q11.23 Seq+ 73146 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPECC1L-CABIN1 SPECC1L chr22 24765288 - CABIN1 chr22 24560368 + Exonic hg19 CESC TCGA-JW-A5VJ-01A 3 1 In-Frame Intra-chr q11.23 Seq+ 73147 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPECC1L-CABIN1 SPECC1L chr22 24765288 - CABIN1 chr22 24530269 + Exonic hg19 UCS TCGA-N8-A4PQ-01A 16 1 In-Frame Intra-chr q11.23 Seq+ 73148 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPECC1L-CPNE4 SPECC1L chr22 24666951 - CPNE4 chr3 132003014 - Exonic hg19 PRAD TCGA-4L-AA1F-01A 22 12 Out-of-frame Inter-chr q11.23 q22.1 Seq+ 73149 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPECC1L-MED15 SPECC1L chr22 24808675 - MED15 chr22 20905723 + Exonic hg19 SKCM TCGA-EB-A5KH-06A 12 9 In-Frame Intra-chr q11.23 q11.21 Seq+ 73150 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPECC1L-PPP6R2 SPECC1L chr22 24709434 - PPP6R2 chr22 50852981 + Exonic hg19 GBM TCGA-06-0745-01A 2 8 Out-of-frame Intra-chr q11.23 q13.33 Seq+ 73151 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPECC1L-PTPLAD1 SPECC1L chr22 24666951 - PTPLAD1 chr15 65844014 + Exonic hg19 UCEC TCGA-EY-A210-01A 4 10 5'UTR-CDS Inter-chr q11.23 Seq+ 73152 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPECC1L-RAD51B SPECC1L chr22 24666951 - RAD51B chr14 69196525 + Exonic hg19 LIHC TCGA-DD-AAE4-01A 16 27 Out-of-frame Inter-chr q11.23 q24.1 Seq+ 73153 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPECC1L-RET SPECC1L chr22 24734445 - RET chr10 43612032 + Exonic hg19 THCA TCGA-CE-A485-01A 48 17 In-Frame Inter-chr q11.23 q11.21 TK:Ret Oncogene Seq+ 73154 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPECC1L-SMARCB1 SPECC1L chr22 24666951 - SMARCB1 chr22 24133943 + Exonic hg19 STAD TCGA-BR-8678-01A 10 13 5'UTR-CDS Intra-chr q11.23 q11.23 Oncogene Tumor suppressor gene Seq+ 73155 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPECC1L-TH1L SPECC1L chr22 24666951 - TH1L chr20 57561148 + Exonic hg19 BRCA TCGA-BH-A0H7-01A 24 24 5'UTR-CDS Inter-chr q11.23 Seq+ 73156 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPECC1L-TM6SF1 SPECC1L chr22 24765288 - TM6SF1 chr15 83796110 + Exonic hg19 SARC TCGA-QQ-A5VA-01A 16 4 In-Frame Inter-chr q11.23 q25.2 Seq+ 73157 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPECC1L-TMEM62 SPECC1L chr22 24743144 - TMEM62 chr15 43461791 + Exonic hg19 OV TCGA-09-1673-01A 10 2 Out-of-frame Inter-chr q11.23 q15.2 Seq+ 73158 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPEF2-C5orf42 SPEF2 chr5 35659309 - C5orf42 chr5 37224842 - Exonic hg19 ACC TCGA-OR-A5JZ-01A 5 3 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 73159 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPEF2-NADKD1 SPEF2 chr5 35654828 - NADKD1 chr5 36227667 - Exonic hg19 LUSC TCGA-66-2793-01A 2 1 In-Frame Intra-chr p13.2 73160 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPEF2-SLC6A18 SPEF2 chr5 35649527 - SLC6A18 chr5 1242822 + Exonic hg19 LIHC TCGA-CC-5264-01A 2 3 In-Frame Intra-chr p13.2 p15.33 Seq+ 73161 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPEN-CERS4 SPEN chr1 16174645 - CERS4 chr19 8315960 + Exonic hg19 LUAD TCGA-38-4630-01A 86 60 CDS-5'UTR Inter-chr p36.21 Transcription factor p13.2 Seq+ 73162 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPEN-CTRC SPEN chr1 16199631 - CTRC chr1 15768943 + Exonic hg19 KIRP TCGA-DZ-6131-01A 2 1 In-Frame Intra-chr p36.21 Transcription factor p36.21 73163 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPEN-DNAJC16 SPEN chr1 16174645 - DNAJC16 chr1 15886021 + Exonic hg19 CESC TCGA-C5-A3HF-01A 10 17 Out-of-frame Intra-chr p36.21 Transcription factor p36.21 Seq+ 73164 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPEN-EFHD2 SPEN chr1 16174645 - EFHD2 chr1 15752367 + Exonic hg19 BLCA TCGA-DK-A3X2-01A 24 11 In-Frame Intra-chr p36.21 Transcription factor p36.21 Seq+ 73165 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPEN-FBLIM1 SPEN chr1 16203173 - FBLIM1 chr1 16101113 + Exonic hg19 LIHC TCGA-5C-AAPD-01A 6 12 Out-of-frame Intra-chr p36.21 Transcription factor p36.21 Seq+ 73166 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPEN-FBLIM1 SPEN chr1 16203173 - FBLIM1 chr1 16090991 + Exonic hg19 BLCA TCGA-K4-A3WV-01A 5 8 CDS-5'UTR Intra-chr p36.21 Transcription factor p36.21 Seq+ 73167 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPEN-FBLIM1 SPEN chr1 16174645 - FBLIM1 chr1 16096904 + Exonic hg19 LIHC TCGA-RC-A6M3-01A 4 3 Out-of-frame Intra-chr p36.21 Transcription factor p36.21 Seq+ 73168 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPEN-FHAD1 SPEN chr1 16174645 - FHAD1 chr1 15668232 + Exonic hg19 PRAD TCGA-YL-A9WI-01A 6 2 Out-of-frame Intra-chr p36.21 Transcription factor p36.21 73169 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPEN-PLEKHM2 SPEN chr1 16203173 - PLEKHM2 chr1 16060292 + Exonic hg19 SARC TCGA-LI-A9QH-01A 57 40 Out-of-frame Intra-chr p36.21 Transcription factor p36.21 Seq+ 73170 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPEN-PLEKHM2 SPEN chr1 16203173 - PLEKHM2 chr1 16042732 + Exonic hg19 CESC TCGA-VS-A959-01A 3 3 Out-of-frame Intra-chr p36.21 Transcription factor p36.21 Seq+ 73171 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPEN-TMEM51 SPEN chr1 16203173 - TMEM51 chr1 15536986 + Exonic hg19 OV TCGA-61-2104-01A 4 2 CDS-5'UTR Intra-chr p36.21 Transcription factor p36.21 Seq+ 73172 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPEN-TNFRSF1B SPEN chr1 16242774 - TNFRSF1B chr1 12262024 + Exonic hg19 PRAD TCGA-HC-8265-01A 23 12 In-Frame Intra-chr p36.21 Transcription factor p36.22 Seq+ 73173 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPEN-TTC34 SPEN chr1 16203173 - TTC34 chr1 2577002 - Exonic hg19 LGG TCGA-VM-A8CD-01A 12 16 Out-of-frame Intra-chr p36.21 Transcription factor Seq+ 73174 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPG11-CAMK2G SPG11 chr15 44865745 - CAMK2G chr10 75613004 - Exonic hg19 BRCA TCGA-AO-A03P-01A 19 5 In-Frame Inter-chr q21.1 q22.2 Seq+ 73175 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPG11-JMJD7 SPG11 chr15 44881450 - JMJD7 chr15 42126938 + Exonic hg19 HNSC TCGA-BB-4223-01A 10 3 In-Frame Intra-chr q21.1 q15.1 Seq+ 73176 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPG7-C3orf25 SPG7 chr16 89599044 - C3orf25 chr3 129140646 - Exonic hg19 UCEC TCGA-EY-A54A-01A 6 3 In-Frame Inter-chr q24.3 73177 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPG7-KIAA0182 SPG7 chr16 89599044 - KIAA0182 chr16 85682158 + Exonic hg19 SKCM TCGA-YG-AA3O-06A 328 164 In-Frame Intra-chr q24.3 73178 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPICE1-MORC1 SPICE1 chr3 113207792 - MORC1 chr3 108690249 - Exonic hg19 OV TCGA-09-2044-01B 3 8 In-Frame Intra-chr q13.2 q13.13 Seq+ 73179 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPIN1-DAPK1 SPIN1 chr9 91003453 - DAPK1 chr9 90283512 + Exonic hg19 KIRC TCGA-B8-A8YJ-01A 2 1 5'UTR-CDS Intra-chr q22.1 q21.33 CAMK:DAPK Tumor suppressor gene 73180 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPIN3-HECTD2 SPIN3 chrX 57021156 - HECTD2 chr10 93185038 + Exonic hg19 COAD TCGA-A6-A56B-01A 4 1 3'UTR-CDS Inter-chr p11.21 q23.32 73181 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPINK4-SQSTM1 SPINK4 chr9 33248564 - SQSTM1 chr5 179250858 + Exonic hg19 PAAD TCGA-HZ-7289-01A 3 1 3'UTR-CDS Inter-chr p13.3 q35.3 73182 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPINK5-DNAJC21 SPINK5 chr5 147505413 - DNAJC21 chr5 34945866 + Exonic hg19 SKCM TCGA-D3-A51N-06A 10 5 In-Frame Intra-chr q32 p13.2 Seq+ 73183 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPINT1-ANXA1 SPINT1 chr15 41149852 - ANXA1 chr9 75772570 + Exonic hg19 CESC TCGA-EA-A3HS-01A 2 14 Out-of-frame Inter-chr q15.1 q21.13 Tumor suppressor gene 73184 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPINT2-DPF1 SPINT2 chr19 38755638 - DPF1 chr19 38713348 - Exonic hg19 LUAD TCGA-50-6594-01A 61 71 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 Transcription factor Seq+ 73185 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPINT2-MAP4K1 SPINT2 chr19 38781215 - MAP4K1 chr19 39087777 - Exonic hg19 LUAD TCGA-55-A492-01A 139 89 In-Frame Intra-chr q13.2 Tumor suppressor gene Tumor suppressor gene Seq+ 73186 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPIRE1-PSMG2 SPIRE1 chr18 12635061 - PSMG2 chr18 12706549 + Exonic hg19 SKCM TCGA-EE-A2GB-06A 17 23 In-Frame Intra-chr p11.21 p11.21 Seq+ 73187 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPIRE1-PTPN2 SPIRE1 chr18 12493071 - PTPN2 chr18 12794484 - Exonic hg19 PCPG TCGA-RW-A67Y-01A 5 13 Out-of-frame Intra-chr p11.21 p11.21 Tumor suppressor gene Seq+ 73188 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPNS1-PRKCB SPNS1 chr16 28986878 - PRKCB chr16 23999829 + Exonic hg19 LUAD TCGA-83-5908-01A 13 3 In-Frame Intra-chr p11.2 p12.2 Tumor suppressor gene 73189 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPNS1-ZNF668 SPNS1 chr16 28989365 - ZNF668 chr16 31075802 - Exonic hg19 LGG TCGA-HT-7689-01A 7 3 Out-of-frame Intra-chr p11.2 p11.2 Tumor suppressor gene Transcription factor Seq+ 73190 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPNS2-PSMD11 SPNS2 chr17 4428488 - PSMD11 chr17 30804539 + Exonic hg19 CHOL TCGA-W5-AA31-01A 48 41 In-Frame Intra-chr p13.2 q11.2 Seq+ 73191 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPO11-GSTA1 SPO11 chr20 55910963 - GSTA1 chr6 52657785 - Exonic hg19 BRCA TCGA-3C-AALJ-01A 3 6 In-Frame Inter-chr q13.31 p12.2 Seq+ 73192 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPOCK1-ARHGAP26 SPOCK1 chr5 136834062 - ARHGAP26 chr5 142500553 + Exonic hg19 LUAD TCGA-95-A4VK-01A 4 5 Out-of-frame Intra-chr q31.2 q31.3 Seq+ 73193 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPOCK1-CDC23 SPOCK1 chr5 136834062 - CDC23 chr5 137548752 - Exonic hg19 PRAD TCGA-V1-A9OL-01A 4 3 Out-of-frame Intra-chr q31.2 q31.2 73194 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPOCK2-ASCC1 SPOCK2 chr10 73831902 - ASCC1 chr10 73857208 - Exonic hg19 CESC TCGA-EX-A8YF-01A 10 4 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 73195 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPON1-CD47 SPON1 chr11 14063201 - CD47 chr3 107799191 - Exonic hg19 UCEC TCGA-AX-A2H4-01A 3 5 Out-of-frame Inter-chr p15.2 q13.12 Seq+ 73196 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPON1-SBF2 SPON1 chr11 13984689 - SBF2 chr11 10064528 - Exonic hg19 SARC TCGA-DX-A7EU-01A 3 1 Out-of-frame Intra-chr p15.2 p15.4 Seq+ 73197 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPON1-SIRT3 SPON1 chr11 14063201 - SIRT3 chr11 233534 - Exonic hg19 LGG TCGA-DU-8166-01A 27 5 In-Frame Intra-chr p15.2 p15.5 Tumor suppressor gene Seq+ 73198 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPON1-THAP2 SPON1 chr11 14063201 - THAP2 chr12 72067983 + Exonic hg19 UCS TCGA-N8-A4PP-01A 24 19 In-Frame Inter-chr p15.2 q21.1 Transcription factor Seq+ 73199 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPON2-CTBP1 SPON2 chr4 1195057 - CTBP1 chr4 1235307 - Exonic hg19 LIHC TCGA-G3-A3CK-01A 2 1 5'UTR-5'UTR Intra-chr p16.3 p16.3 Seq+ 73200 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPON2-CTBP1 SPON2 chr4 1202364 - CTBP1 chr4 1235307 - Exonic hg19 PRAD TCGA-KK-A8I4-01A 2 2 5'UTR-5'UTR Intra-chr p16.3 p16.3 Seq+ 73201 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPON2-CTBP1 SPON2 chr4 1198770 - CTBP1 chr4 1235307 - Exonic hg19 LIHC TCGA-ZS-A9CE-01A 3 1 5'UTR-5'UTR Intra-chr p16.3 p16.3 Seq+ 73202 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPON2-HS1BP3 SPON2 chr4 1160725 - HS1BP3 chr2 20822079 - Exonic hg19 PRAD TCGA-YL-A8HM-01A 2 1 Out-of-frame Inter-chr p16.3 p24.1 73203 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPON2-PARP1 SPON2 chr4 1160725 - PARP1 chr1 224102800 - Exonic hg19 PRAD TCGA-V1-A9O5-06A 2 34 Out-of-frame Inter-chr p16.3 q42.12 Oncogene Tumor suppressor gene 73204 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPOP-AARSD1 SPOP chr17 47688642 - AARSD1 chr17 41116254 - Exonic hg19 ACC TCGA-OR-A5KT-01A 6 2 Out-of-frame Intra-chr q21.33 Oncogene Tumor suppressor gene q21.31 73205 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPOP-ARL5C SPOP chr17 47755295 - ARL5C chr17 37322870 - Exonic hg19 BRCA TCGA-E2-A3DX-01A 3 3 5'UTR-5'UTR Intra-chr q21.33 Oncogene Tumor suppressor gene q12 Seq+ 73206 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPOP-C17orf57 SPOP chr17 47755295 - C17orf57 chr17 45351785 + Exonic hg19 ESCA TCGA-L5-A4OH-01A 3 9 5'UTR-5'UTR Intra-chr q21.33 Oncogene Tumor suppressor gene 73207 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPOP-CA10 SPOP chr17 47755295 - CA10 chr17 50008492 - Exonic hg19 LIHC TCGA-ED-A97K-01A 3 2 5'UTR-CDS Intra-chr q21.33 Oncogene Tumor suppressor gene q22 Seq+ 73208 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPOP-EPHX2 SPOP chr17 47755295 - EPHX2 chr8 27358443 + Exonic hg19 UCS TCGA-ND-A4WF-01A 9 12 5'UTR-CDS Inter-chr q21.33 Oncogene Tumor suppressor gene p21.2 Seq+ 73209 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPOP-FAM117A SPOP chr17 47745389 - FAM117A chr17 47810082 - Exonic hg19 OV TCGA-13-A5FT-01A 2 2 5'UTR-CDS Intra-chr q21.33 Oncogene Tumor suppressor gene q21.33 Seq+ 73210 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPOP-FAM117A SPOP chr17 47755295 - FAM117A chr17 47799956 - Exonic hg19 KIRC TCGA-B0-4713-01A 18 12 5'UTR-CDS Intra-chr q21.33 Oncogene Tumor suppressor gene q21.33 Seq+ 73211 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPOP-GPATCH1 SPOP chr17 47755295 - GPATCH1 chr19 33609916 + Exonic hg19 LUAD TCGA-69-A59K-01A 30 20 5'UTR-CDS Inter-chr q21.33 Oncogene Tumor suppressor gene q13.11 Seq+ 73212 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPOP-NDUFS5 SPOP chr17 47755295 - NDUFS5 chr1 39494395 + Exonic hg19 UCEC TCGA-EY-A4KR-01A 95 94 5'UTR-5'UTR Inter-chr q21.33 Oncogene Tumor suppressor gene p34.3 Seq+ 73213 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPOP-PRDM16 SPOP chr17 47755295 - PRDM16 chr1 3301716 + Exonic hg19 LGG TCGA-DU-A5TP-01A 3 1 5'UTR-CDS Inter-chr q21.33 Oncogene Tumor suppressor gene p36.32 Transcription factor Seq+ 73214 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPOP-RARA SPOP chr17 47755295 - RARA chr17 38487109 + Exonic hg19 BRCA TCGA-LD-A9QF-01A 6 8 5'UTR-5'UTR Intra-chr q21.33 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor Seq+ 73215 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPOP-SLC35B1 SPOP chr17 47755295 - SLC35B1 chr17 47783671 - Exonic hg19 OV TCGA-10-0928-01A 14 5 5'UTR-CDS Intra-chr q21.33 Oncogene Tumor suppressor gene q21.33 Seq+ 73216 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPOP-SLC35B1 SPOP chr17 47684612 - SLC35B1 chr17 47781588 - Exonic hg19 LUSC TCGA-22-4613-01A 16 10 In-Frame Intra-chr q21.33 Oncogene Tumor suppressor gene q21.33 Seq+ 73217 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPOP-TAC4 SPOP chr17 47755295 - TAC4 chr17 47921519 - Exonic hg19 BRCA TCGA-AO-A1KR-01A 16 4 5'UTR-CDS Intra-chr q21.33 Oncogene Tumor suppressor gene q21.33 Seq+ 73218 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPOP-TAOK1 SPOP chr17 47679227 - TAOK1 chr17 27869579 + Exonic hg19 BRCA TCGA-E2-A14V-01A 9 23 Out-of-frame Intra-chr q21.33 Oncogene Tumor suppressor gene q11.2 Seq+ 73219 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPOP-XYLT2 SPOP chr17 47755295 - XYLT2 chr17 48430991 + Exonic hg19 BRCA TCGA-A8-A07I-01A 19 13 5'UTR-CDS Intra-chr q21.33 Oncogene Tumor suppressor gene q21.33 Seq+ 73220 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPP1-STAT6 SPP1 chr4 88904562 - STAT6 chr12 57496773 - Exonic hg19 KICH TCGA-KN-8418-01A 2 11 Out-of-frame Inter-chr q22.1 q13.3 Transcription factor 73221 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPP1-THSD4 SPP1 chr4 88904562 - THSD4 chr15 72072881 + Exonic hg19 LUSC TCGA-92-8063-01A 2 44 Out-of-frame Inter-chr q22.1 q23 73222 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPP1-TYK2 SPP1 chr4 88904562 - TYK2 chr19 10491352 - Exonic hg19 KIRC TCGA-AK-3444-01A 2 5 Out-of-frame Inter-chr q22.1 p13.2 TK:JakA 73223 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPRED1-AP3B2 SPRED1 chr15 38591748 - AP3B2 chr15 83358205 - Exonic hg19 READ TCGA-CI-6621-01A 4 3 Out-of-frame Intra-chr q14 q25.2 Seq+ 73224 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPRED1-GANC SPRED1 chr15 38591748 - GANC chr15 42579889 + Exonic hg19 SKCM TCGA-ER-A1A1-06A 4 1 In-Frame Intra-chr q14 q15.1 73225 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPRED1-TMCO5A SPRED1 chr15 38545418 - TMCO5A chr15 38227458 + Exonic hg19 LUAD TCGA-05-4427-01A 18 12 Out-of-frame Intra-chr q14 q14 Seq+ 73226 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPRED2-G2E3 SPRED2 chr2 65659096 - G2E3 chr14 31050282 + Exonic hg19 GBM TCGA-28-2514-01A 7 25 CDS-5'UTR Inter-chr p14 q12 Seq+ 73227 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPRED2-NAPG SPRED2 chr2 65659096 - NAPG chr18 10530767 + Exonic hg19 LGG TCGA-DB-5277-01A 13 3 In-Frame Inter-chr p14 p11.22 Seq+ 73228 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPRYD4-MDM1 SPRYD4 chr12 56862460 - MDM1 chr12 68717020 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 24 3 Out-of-frame Intra-chr q13.3 q15 Seq+ 73229 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPSB1-H6PD SPSB1 chr1 9353130 - H6PD chr1 9322118 + Exonic hg19 LUSC TCGA-34-8454-01A 4 2 5'UTR-CDS Intra-chr p36.22 p36.22 Seq+ 73230 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPSB1-H6PD SPSB1 chr1 9353130 - H6PD chr1 9322118 + Exonic hg19 THCA TCGA-BJ-A0Z9-01A 2 1 5'UTR-CDS Intra-chr p36.22 p36.22 Seq+ 73231 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPSB1-H6PD SPSB1 chr1 9353130 - H6PD chr1 9322118 + Exonic hg19 THCA TCGA-J8-A3O2-01A 4 2 5'UTR-CDS Intra-chr p36.22 p36.22 Seq+ 73232 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPSB1-TAF12 SPSB1 chr1 9353130 - TAF12 chr1 28948677 - Exonic hg19 SARC TCGA-K1-A3PO-01A 10 4 5'UTR-5'UTR Intra-chr p36.22 p35.3 Seq+ 73233 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPSB3-C16orf73 SPSB3 chr16 1831359 - C16orf73 chr16 1915836 - Exonic hg19 BRCA TCGA-A2-A0D2-01A 19 11 In-Frame Intra-chr p13.3 73234 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTA1-GRIP1 SPTA1 chr1 158631077 - GRIP1 chr12 66923694 - Exonic hg19 BRCA TCGA-BH-A1EV-01A 7 3 In-Frame Inter-chr q23.1 q14.3 Seq+ 73235 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTAN1-AUH SPTAN1 chr9 131331176 - AUH chr9 94087686 - Exonic hg19 BRCA TCGA-B6-A0RM-01A 14 13 Out-of-frame Intra-chr q34.11 q22.31 Seq+ 73236 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTAN1-CADPS2 SPTAN1 chr9 131314975 - CADPS2 chr7 122377122 - Exonic hg19 BRCA TCGA-D8-A1JI-01A 36 18 5'UTR-CDS Inter-chr q34.11 q31.32 Seq+ 73237 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTAN1-FPGS SPTAN1 chr9 131314975 - FPGS chr9 130566564 + Exonic hg19 STAD TCGA-IN-A6RN-01A 3 3 5'UTR-5'UTR Intra-chr q34.11 q34.11 Seq+ 73238 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTAN1-GLE1 SPTAN1 chr9 131314975 - GLE1 chr9 131277808 + Exonic hg19 BRCA TCGA-AO-A03O-01A 3 5 5'UTR-CDS Intra-chr q34.11 q34.11 Seq+ 73239 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTAN1-GLE1 SPTAN1 chr9 131337624 - GLE1 chr9 131284947 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 65 53 In-Frame Intra-chr q34.11 q34.11 Seq+ 73240 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTAN1-GLE1 SPTAN1 chr9 131314975 - GLE1 chr9 131295792 + Exonic hg19 STAD TCGA-HU-A4H2-01A 3 51 5'UTR-CDS Intra-chr q34.11 q34.11 Seq+ 73241 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTAN1-MAPKAP1 SPTAN1 chr9 131356652 - MAPKAP1 chr9 128268696 - Exonic hg19 SKCM TCGA-EB-A24D-01A 91 37 Out-of-frame Intra-chr q34.11 q33.3 Seq+ 73242 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTAN1-SGTA SPTAN1 chr9 131314975 - SGTA chr19 2761520 - Exonic hg19 UCS TCGA-NA-A4R1-01A 141 40 5'UTR-CDS Inter-chr q34.11 p13.3 Seq+ 73243 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTB-RAB15 SPTB chr14 65263275 - RAB15 chr14 65415451 - Exonic hg19 LUAD TCGA-55-8205-01A 2 2 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 73244 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTBN1-ECI2 SPTBN1 chr2 54826380 - ECI2 chr6 4133935 - Exonic hg19 PRAD TCGA-KK-A8II-01A 114 73 CDS-5'UTR Inter-chr p16.2 Tumor suppressor gene p25.2 Seq+ 73245 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTBN1-MFN1 SPTBN1 chr2 54896812 - MFN1 chr3 179096011 + Exonic hg19 SKCM TCGA-EE-A2GU-06A 2 3 Out-of-frame Inter-chr p16.2 Tumor suppressor gene q26.33 73246 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTBN1-MUC2 SPTBN1 chr2 54856940 - MUC2 chr11 1092080 + Exonic hg19 COAD TCGA-A6-A565-01A 2 23 Out-of-frame Inter-chr p16.2 Tumor suppressor gene 73247 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTBN1-SPAG5 SPTBN1 chr2 54826380 - SPAG5 chr17 26920084 - Exonic hg19 STAD TCGA-VQ-A922-01A 2 32 In-Frame Inter-chr p16.2 Tumor suppressor gene q11.2 Seq+ 73248 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTBN1-STX8 SPTBN1 chr2 54753703 - STX8 chr17 9281970 - Exonic hg19 SKCM TCGA-D3-A2JA-06A 30 26 In-Frame Inter-chr p16.2 Tumor suppressor gene p13.1 Seq+ 73249 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTBN2-ARHGEF17 SPTBN2 chr11 66472069 - ARHGEF17 chr11 73057928 + Exonic hg19 SKCM TCGA-YG-AA3P-06A 2 1 Out-of-frame Intra-chr q13.2 q13.4 73250 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTBN2-FGF19 SPTBN2 chr11 66453869 - FGF19 chr11 69514344 - Exonic hg19 BRCA TCGA-A2-A3Y0-01A 30 25 In-Frame Intra-chr q13.2 q13.3 Seq+ 73251 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTBN2-PC SPTBN2 chr11 66488555 - PC chr11 66639630 - Exonic hg19 ESCA TCGA-LN-A8I1-01A 2 7 CDS-5'UTR Intra-chr q13.2 q13.2 Seq+ 73252 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTBN4-C19orf47 SPTBN4 chr19 41026058 - C19orf47 chr19 40842314 - Exonic hg19 BRCA TCGA-BH-A1F6-01A 12 9 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 73253 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTBN4-RAD51B SPTBN4 chr19 40973212 - RAD51B chr14 68758601 + Exonic hg19 LIHC TCGA-DD-AACV-01A 4 1 5'UTR-CDS Inter-chr q13.2 q24.1 Seq+ 73254 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTBN4-SIPA1L3 SPTBN4 chr19 41040250 - SIPA1L3 chr19 38673159 + Exonic hg19 PRAD TCGA-KK-A8ID-01A 2 1 Out-of-frame Intra-chr q13.2 q13.13 Seq+ 73255 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTLC1-IARS SPTLC1 chr9 94830248 - IARS chr9 95007353 - Exonic hg19 UCS TCGA-NF-A4WX-01A 5 5 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 73256 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTLC2-DIAPH3 SPTLC2 chr14 78043110 - DIAPH3 chr13 60348957 - Exonic hg19 STAD TCGA-IN-AB1X-01A 6 52 In-Frame Inter-chr q24.3 q21.2 Seq+ 73257 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTLC2-PID1 SPTLC2 chr14 78063529 - PID1 chr2 230020680 - Exonic hg19 LUAD TCGA-49-4507-01A 5 3 In-Frame Inter-chr q24.3 q36.3 73258 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTLC2-SNW1 SPTLC2 chr14 78018439 - SNW1 chr14 78205404 - Exonic hg19 STAD TCGA-CG-4443-01A 2 3 Out-of-frame Intra-chr q24.3 q24.3 73259 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTLC3-AC040934.1 SPTLC3 chr20 13107364 - AC040934.1 chr17 45534159 - Exonic hg19 BRCA TCGA-AN-A0XW-01A 3 9 Out-of-frame Inter-chr p12.1 q21.32 73260 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SPTLC3-PPAP2A SPTLC3 chr20 13090864 - PPAP2A chr5 54737736 - Exonic hg19 OV TCGA-25-1329-01A 8 5 In-Frame Inter-chr p12.1 Seq+ 73261 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SQLE-RBFOX3 SQLE chr8 126023874 - RBFOX3 chr17 77303906 - Exonic hg19 LIHC TCGA-CC-A8HV-01A 9 4 CDS-5'UTR Inter-chr q24.13 q25.3 Seq+ 73262 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SQSTM1-AP1G2 SQSTM1 chr5 179264252 - AP1G2 chr14 24037279 - Exonic hg19 BRCA TCGA-AR-A5QM-01A 2 22 3'UTR-5'UTR Inter-chr q35.3 q11.2 73263 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SQSTM1-GRIA1 SQSTM1 chr5 179233591 - GRIA1 chr5 153077604 + Exonic hg19 LUAD TCGA-95-A4VK-01A 14 1 5'UTR-5'UTR Intra-chr q35.3 q33.2 Seq+ 73264 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SQSTM1-IQCE SQSTM1 chr5 179264252 - IQCE chr7 2641075 + Exonic hg19 ACC TCGA-OR-A5LP-01A 2 83 3'UTR-CDS Inter-chr q35.3 p22.3 73265 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SQSTM1-NTRK1 SQSTM1 chr5 179252226 - NTRK1 chr1 156844363 + Exonic hg19 THCA TCGA-ET-A40S-01A 699 349 In-Frame Inter-chr q35.3 q23.1 Oncogene KB Pub Seq+ 73266 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SQSTM1-NTRK2 SQSTM1 chr5 179252226 - NTRK2 chr9 87549077 + Exonic hg19 LGG TCGA-DU-A76L-01A 12 13 In-Frame Inter-chr q35.3 q21.33 Oncogene Seq+ 73267 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRBD1-AC013480.1 SRBD1 chr2 45789792 - AC013480.1 chr2 42165753 - Exonic hg19 SKCM TCGA-EB-A6L9-06A 38 27 Out-of-frame Intra-chr p21 p21 73268 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRBD1-ATL2 SRBD1 chr2 45704132 - ATL2 chr2 38523255 - Exonic hg19 SKCM TCGA-EB-A6L9-06A 5 3 In-Frame Intra-chr p21 p22.1 73269 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRBD1-CCDC88A SRBD1 chr2 45704132 - CCDC88A chr2 55646052 - Exonic hg19 BRCA TCGA-A7-A26G-01A 4 5 In-Frame Intra-chr p21 p16.1 Seq+ 73270 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRBD1-PLEKHA6 SRBD1 chr2 45780762 - PLEKHA6 chr1 204243937 - Exonic hg19 BRCA TCGA-BH-A209-01A 10 3 CDS-5'UTR Inter-chr p21 q32.1 Seq+ 73271 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRCAP-RP11-195F19.29 SRCAP chr16 30725032 - RP11-195F19.29 chr9 34655215 + Exonic hg19 LUSC TCGA-43-7658-01A 56 36 Out-of-frame Inter-chr p11.2 Transcription factor 73272 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRCAP-RPS4Y1 SRCAP chr16 30727800 - RPS4Y1 chrY 2722641 + Exonic hg19 GBM TCGA-06-0132-01A 11 40 CDS-5'UTR Inter-chr p11.2 Transcription factor p11.2 Seq+ 73273 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRCIN1-KRT39 SRCIN1 chr17 36728915 - KRT39 chr17 39115111 - Exonic hg19 READ TCGA-EI-6509-01A 7 17 Out-of-frame Intra-chr q12 Seq+ 73274 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRCIN1-LASP1 SRCIN1 chr17 36761937 - LASP1 chr17 37070578 + Exonic hg19 READ TCGA-EI-6509-01A 298 34 Out-of-frame Intra-chr q12 q12 Seq+ 73275 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRCIN1-PCGF2 SRCIN1 chr17 36707391 - PCGF2 chr17 36896695 - Exonic hg19 UCEC TCGA-SL-A6J9-01A 2 1 CDS-5'UTR Intra-chr q12 Tumor suppressor gene Transcription factor 73276 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRCIN1-PCYT2 SRCIN1 chr17 36734743 - PCYT2 chr17 79867478 - Exonic hg19 BRCA TCGA-A2-A0T1-01A 20 8 Out-of-frame Intra-chr q12 q25.3 Seq+ 73277 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRD5A1-ADAMTS16 SRD5A1 chr5 6633982 - ADAMTS16 chr5 5303381 + Exonic hg19 LUAD TCGA-75-5122-01A 5 5 3'UTR-CDS Intra-chr p15.31 p15.32 Seq+ 73278 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRD5A1-C1QTNF3 SRD5A1 chr5 6633982 - C1QTNF3 chr5 34035863 - Exonic hg19 KIRP TCGA-B9-A5W9-01A 9 6 3'UTR-CDS Intra-chr p15.31 p13.2 Seq+ 73279 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SREBF1-LRRC48 SREBF1 chr17 17740041 - LRRC48 chr17 17877166 + Exonic hg19 BRCA TCGA-AC-A2QH-01B 5 13 CDS-5'UTR Intra-chr p11.2 Transcription factor Seq+ 73280 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SREBF1-MED9 SREBF1 chr17 17740041 - MED9 chr17 17394593 + Exonic hg19 BLCA TCGA-K4-A5RH-01A 25 12 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 73281 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SREBF1-STAT3 SREBF1 chr17 17726832 - STAT3 chr17 40500557 - Exonic hg19 PRAD TCGA-VP-A87C-01A 54 33 CDS-5'UTR Intra-chr p11.2 Transcription factor q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 73282 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SREBF1-ZNF232 SREBF1 chr17 17740041 - ZNF232 chr17 5013163 - Exonic hg19 UCEC TCGA-AJ-A2QM-01A 20 19 Out-of-frame Intra-chr p11.2 Transcription factor p13.2 Transcription factor Seq+ 73283 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SREBF2-ACO2 SREBF2 chr22 42229362 - ACO2 chr22 41918834 + Exonic hg19 BRCA TCGA-BH-A0HY-01A 68 43 CDS-5'UTR Intra-chr q13.2 Transcription factor q13.2 Seq+ 73284 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SREBF2-EFCAB6 SREBF2 chr22 42276996 - EFCAB6 chr22 43950976 - Exonic hg19 LUAD TCGA-99-AA5R-01A 7 5 Out-of-frame Intra-chr q13.2 Transcription factor q13.31 Seq+ 73285 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SREBF2-FMNL2 SREBF2 chr22 42290941 - FMNL2 chr2 153463853 + Exonic hg19 BRCA TCGA-C8-A26Y-01A 26 28 Out-of-frame Inter-chr q13.2 Transcription factor q23.3 Seq+ 73286 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SREBF2-MEI1 SREBF2 chr22 42264796 - MEI1 chr22 42166690 + Exonic hg19 LUAD TCGA-49-AARE-01A 38 23 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 73287 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SREBF2-PPAPDC1A SREBF2 chr22 42229362 - PPAPDC1A chr10 122334643 + Exonic hg19 LUAD TCGA-97-8175-01A 139 76 In-Frame Inter-chr q13.2 Transcription factor Seq+ 73288 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SREBF2-RNF214 SREBF2 chr22 42281015 - RNF214 chr11 117150624 + Exonic hg19 LUSC TCGA-56-A5DR-01A 10 3 Out-of-frame Inter-chr q13.2 Transcription factor q23.3 Seq+ 73289 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SREK1-ST6GAL1 SREK1 chr5 65449424 - ST6GAL1 chr3 186756530 + Exonic hg19 LUSC TCGA-79-5596-01A 13 7 5'UTR-5'UTR Inter-chr q12.3 q27.3 Seq+ 73290 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SREK1IP1-CCDC112 SREK1IP1 chr5 64064332 - CCDC112 chr5 114612751 - Exonic hg19 SKCM TCGA-D3-A51N-06A 6 2 In-Frame Intra-chr q12.3 q22.3 Seq+ 73291 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRF-F5 SRF chr6 43141851 - F5 chr1 169483697 - Exonic hg19 BRCA TCGA-A1-A0SK-01A 64 42 In-Frame Inter-chr p21.1 Transcription factor q24.2 Seq+ 73292 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRGAP1-AUTS2 SRGAP1 chr12 64410792 - AUTS2 chr7 70163555 + Exonic hg19 UCS TCGA-N5-A4RO-01A 2 3 In-Frame Inter-chr q14.2 q11.22 73293 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRGAP1-BACE2 SRGAP1 chr12 64238663 - BACE2 chr21 42598193 + Exonic hg19 CESC TCGA-EK-A2PM-01A 3 1 Out-of-frame Inter-chr q14.2 q22.2 73294 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRGAP1-GAB2 SRGAP1 chr12 64480806 - GAB2 chr11 77991947 - Exonic hg19 BRCA TCGA-A8-A0A9-01A 65 46 Out-of-frame Inter-chr q14.2 q14.1 Seq+ 73295 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRGAP1-KNTC1 SRGAP1 chr12 64238663 - KNTC1 chr12 123075154 + Exonic hg19 STAD TCGA-BR-7959-01A 5 30 Out-of-frame Intra-chr q14.2 q24.31 Seq+ 73296 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRGAP1-PTPRR SRGAP1 chr12 64238663 - PTPRR chr12 71158558 - Exonic hg19 SARC TCGA-DX-A23Z-01A 6 5 Out-of-frame Intra-chr q14.2 q15 Seq+ 73297 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRGAP1-PWP1 SRGAP1 chr12 64238663 - PWP1 chr12 108090251 + Exonic hg19 LUAD TCGA-O1-A52J-01A 2 3 In-Frame Intra-chr q14.2 q23.3 73298 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRGAP1-TMEM5 SRGAP1 chr12 64238663 - TMEM5 chr12 64202455 + Exonic hg19 SARC TCGA-DX-A2J1-01A 39 40 Out-of-frame Intra-chr q14.2 q14.2 Seq+ 73299 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRGAP1-TMEM5 SRGAP1 chr12 64238663 - TMEM5 chr12 64174799 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 3 3 In-Frame Intra-chr q14.2 q14.2 Seq+ 73300 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRGAP2-KCNJ10 SRGAP2 chr1 206610392 - KCNJ10 chr1 160012322 - Exonic hg19 CESC TCGA-VS-A957-01A 2 1 CDS-5'UTR Intra-chr q32.1 Tumor suppressor gene q23.2 Seq+ 73301 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRGAP3-ATP2B2 SRGAP3 chr3 9290569 - ATP2B2 chr3 10491546 - Exonic hg19 HNSC TCGA-CV-7418-01A 2 1 CDS-5'UTR Intra-chr p25.3 Tumor suppressor gene p25.3 Seq+ 73302 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRGAP3-FAM83H SRGAP3 chr3 9051992 - FAM83H chr8 144812767 - Exonic hg19 BLCA TCGA-FD-A3SJ-01A 3 1 CDS-5'UTR Inter-chr p25.3 Tumor suppressor gene 73303 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRGAP3-ITPR1 SRGAP3 chr3 9032196 - ITPR1 chr3 4808214 + Exonic hg19 CESC TCGA-VS-A9UO-01A 5 4 In-Frame Intra-chr p25.3 Tumor suppressor gene p26.1 Seq+ 73304 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRGAP3-LHFPL4 SRGAP3 chr3 9054992 - LHFPL4 chr3 9547887 - Exonic hg19 UCEC TCGA-A5-A2K4-01A 3 1 Out-of-frame Intra-chr p25.3 Tumor suppressor gene p25.3 Seq+ 73305 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRGAP3-LHFPL4 SRGAP3 chr3 9290569 - LHFPL4 chr3 9547887 - Exonic hg19 UCEC TCGA-EO-A1Y7-01A 2 3 In-Frame Intra-chr p25.3 Tumor suppressor gene p25.3 Seq+ 73306 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRGAP3-LHFPL4 SRGAP3 chr3 9290569 - LHFPL4 chr3 9547887 - Exonic hg19 UCEC TCGA-KJ-A3U4-01A 9 2 In-Frame Intra-chr p25.3 Tumor suppressor gene p25.3 Seq+ 73307 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRI-PIP4K2C SRI chr7 87840197 - PIP4K2C chr12 57987808 + Exonic hg19 SARC TCGA-DX-A6BH-01A 236 272 In-Frame Inter-chr q21.12 q13.3 Seq+ 73308 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRM-SMEK1 SRM chr1 11118857 - SMEK1 chr14 91957146 - Exonic hg19 GBM TCGA-08-0386-01A 3 7 Out-of-frame Inter-chr p36.22 TK:Src Seq+ 73309 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRP68-AP1M2 SRP68 chr17 74046509 - AP1M2 chr19 10694746 - Exonic hg19 GBM TCGA-76-4925-01A 3 15 In-Frame Inter-chr q25.1 p13.2 Seq+ 73310 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRP68-CDK3 SRP68 chr17 74042119 - CDK3 chr17 74001379 + Exonic hg19 BLCA TCGA-ZF-AA51-01A 21 12 CDS-5'UTR Intra-chr q25.1 q25.1 CMGC:CDK Seq+ 73311 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRP68-EXOC7 SRP68 chr17 74063298 - EXOC7 chr17 74090662 - Exonic hg19 UCEC TCGA-AP-A5FX-01A 4 1 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 73312 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRP68-LPO SRP68 chr17 74036500 - LPO chr17 56327776 + Exonic hg19 BRCA TCGA-BH-A0DG-01A 53 23 In-Frame Intra-chr q25.1 q22 Seq+ 73313 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRP68-RCAN1 SRP68 chr17 74060057 - RCAN1 chr21 35896008 - Exonic hg19 LUAD TCGA-50-5944-01A 19 16 In-Frame Inter-chr q25.1 q22.12 Seq+ 73314 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRP68-URM1 SRP68 chr17 74039910 - URM1 chr9 131150095 + Exonic hg19 GBM TCGA-06-0219-01A 7 13 Out-of-frame Inter-chr q25.1 q34.11 Seq+ 73315 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRP68-XIRP2 SRP68 chr17 74053484 - XIRP2 chr2 168067245 + Exonic hg19 BLCA TCGA-4Z-AA84-01A 14 4 Out-of-frame Inter-chr q25.1 q24.3 Seq+ 73316 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRPK1-ANKRD42 SRPK1 chr6 35888245 - ANKRD42 chr11 82938789 + Exonic hg19 BRCA TCGA-EW-A6SD-01A 18 11 Out-of-frame Inter-chr p21.31 CMGC:SRPK q14.1 Seq+ 73317 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRPK1-BAI3 SRPK1 chr6 35888245 - BAI3 chr6 69347283 + Exonic hg19 COAD TCGA-AA-3655-01A 2 1 CDS-5'UTR Intra-chr p21.31 CMGC:SRPK 73318 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRPK1-CCHCR1 SRPK1 chr6 35888245 - CCHCR1 chr6 31111190 - Exonic hg19 PRAD TCGA-KK-A8I9-01A 2 1 Out-of-frame Intra-chr p21.31 CMGC:SRPK 73319 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRPK1-CCL18 SRPK1 chr6 35888245 - CCL18 chr17 34397807 + Exonic hg19 TGCT TCGA-SB-A6J6-01A 26 36 Out-of-frame Inter-chr p21.31 CMGC:SRPK q12 Seq+ 73320 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRPK1-CCND3 SRPK1 chr6 35888245 - CCND3 chr6 41908323 - Exonic hg19 STAD TCGA-VQ-A925-01A 17 59 Out-of-frame Intra-chr p21.31 CMGC:SRPK p21.1 Seq+ 73321 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRPK1-CEP57L1 SRPK1 chr6 35810312 - CEP57L1 chr6 109481775 + Exonic hg19 LUSC TCGA-94-7033-01A 58 40 Out-of-frame Intra-chr p21.31 CMGC:SRPK q21 Seq+ 73322 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRPK1-DDAH1 SRPK1 chr6 35836787 - DDAH1 chr1 85824530 - Exonic hg19 BRCA TCGA-BH-A5IZ-01A 39 39 In-Frame Inter-chr p21.31 CMGC:SRPK p22.3 Seq+ 73323 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRPK1-PXT1 SRPK1 chr6 35806114 - PXT1 chr6 36359651 - Exonic hg19 UCEC TCGA-BK-A26L-01A 4 6 Out-of-frame Intra-chr p21.31 CMGC:SRPK p21.31 Seq+ 73324 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRPK2-ATXN7L1 SRPK2 chr7 105029095 - ATXN7L1 chr7 105305735 - Exonic hg19 HNSC TCGA-CV-7418-01A 2 1 Out-of-frame Intra-chr q22.3 CMGC:SRPK q22.3 73325 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRPK2-DYNC1I1 SRPK2 chr7 105029095 - DYNC1I1 chr7 95499195 + Exonic hg19 LUAD TCGA-NJ-A4YQ-01A 2 1 In-Frame Intra-chr q22.3 CMGC:SRPK q21.3 73326 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRPK2-EFCAB10 SRPK2 chr7 105029095 - EFCAB10 chr7 105210018 - Exonic hg19 UCEC TCGA-AX-A2H4-01A 3 8 CDS-3'UTR Intra-chr q22.3 CMGC:SRPK q22.3 Seq+ 73327 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRPK2-KIAA1324L SRPK2 chr7 104844075 - KIAA1324L chr7 86509846 - Exonic hg19 HNSC TCGA-BB-4224-01A 16 3 Out-of-frame Intra-chr q22.3 CMGC:SRPK q21.12 73328 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRPK2-KIF12 SRPK2 chr7 105029095 - KIF12 chr9 116861449 - Exonic hg19 UCEC TCGA-AX-A2H4-01A 7 5 CDS-5'UTR Inter-chr q22.3 CMGC:SRPK q32 Seq+ 73329 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRPK2-LRP5 SRPK2 chr7 105029095 - LRP5 chr11 68213904 + Exonic hg19 LUSC TCGA-85-8352-01A 53 46 Out-of-frame Inter-chr q22.3 CMGC:SRPK q13.2 Seq+ 73330 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRPK2-PRKAR2B SRPK2 chr7 104800954 - PRKAR2B chr7 106791367 + Exonic hg19 KIRP TCGA-5P-A9JZ-01A 269 177 In-Frame Intra-chr q22.3 CMGC:SRPK Seq+ 73331 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRPK2-ZC3HC1 SRPK2 chr7 104800954 - ZC3HC1 chr7 129688984 - Exonic hg19 KIRP TCGA-5P-A9JZ-01A 30 21 Out-of-frame Intra-chr q22.3 CMGC:SRPK q32.2 Seq+ 73332 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRRM1-C1orf135 SRRM1 chr1 24981620 - C1orf135 chr1 26164045 - Exonic hg19 BRCA TCGA-D8-A1XZ-01A 23 12 Out-of-frame Intra-chr p36.11 Seq+ 73333 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRRM1-NFYC SRRM1 chr1 24972564 - NFYC chr1 41204508 + Exonic hg19 PRAD TCGA-HC-8262-01A 2 3 CDS-5'UTR Intra-chr p36.11 p34.2 Transcription factor Seq+ 73334 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRRM2-KCTD5 SRRM2 chr16 2810500 - KCTD5 chr16 2745936 + Exonic hg19 OV TCGA-24-1470-01A 2 32 In-Frame Intra-chr p13.3 p13.3 Seq+ 73335 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRRM2-PRSS33 SRRM2 chr16 2810500 - PRSS33 chr16 2836122 - Exonic hg19 HNSC TCGA-CV-7247-01A 37 7 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 73336 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRRM2-SNRPE SRRM2 chr16 2810500 - SNRPE chr1 203839005 + Exonic hg19 PRAD TCGA-V1-A8X3-01A 21 98 Out-of-frame Inter-chr p13.3 q32.1 Seq+ 73337 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRRT-C7orf16 SRRT chr7 100479862 - C7orf16 chr7 31732020 + Exonic hg19 GBM TCGA-06-0184-01A 5 18 Out-of-frame Intra-chr q22.1 73338 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRRT-TRIP6 SRRT chr7 100473333 - TRIP6 chr7 100470246 + Exonic hg19 KIRC TCGA-B0-5097-01A 12 4 In-Frame Intra-chr q22.1 q22.1 73339 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRRT-ZAN SRRT chr7 100473333 - ZAN chr7 100377068 + Exonic hg19 GBM TCGA-28-2499-01A 3 7 In-Frame Intra-chr q22.1 q22.1 Seq+ 73340 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRSF4-CREB5 SRSF4 chr1 29508158 - CREB5 chr7 28843816 + Exonic hg19 BLCA TCGA-FJ-A3Z7-01A 16 10 Out-of-frame Inter-chr p35.3 p15.1 Transcription factor Seq+ 73341 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRSF4-MECR SRSF4 chr1 29481208 - MECR chr1 29543197 - Exonic hg19 LIHC TCGA-BC-A10R-01A 5 3 In-Frame Intra-chr p35.3 p35.3 Seq+ 73342 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRSF4-MECR SRSF4 chr1 29508158 - MECR chr1 29533417 - Exonic hg19 STAD TCGA-BR-8289-01A 12 83 Out-of-frame Intra-chr p35.3 p35.3 Seq+ 73343 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRSF4-SCRN3 SRSF4 chr1 29508158 - SCRN3 chr2 175264650 + Exonic hg19 BRCA TCGA-A7-A26J-01A 4 6 Out-of-frame Inter-chr p35.3 q31.1 Seq+ 73344 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRSF4-SIAE SRSF4 chr1 29474261 - SIAE chr11 124543777 - Exonic hg19 COAD TCGA-A6-6648-01A 2 2 3'UTR-5'UTR Inter-chr p35.3 q24.2 73345 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRSF5-CCT5 SRSF5 chr14 70238721 - CCT5 chr5 10250033 + Exonic hg19 CESC TCGA-C5-A905-01A 2 5 Out-of-frame Inter-chr q24.1 p15.2 73346 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SRSF9-RFX4 SRSF9 chr12 120907225 - RFX4 chr12 107109178 + Exonic hg19 STAD TCGA-BR-4366-01A 100 43 Out-of-frame Intra-chr q24.31 q23.3 Transcription factor Seq+ 73347 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SS18-DOCK2 SS18 chr18 23612363 - DOCK2 chr5 169267761 + Exonic hg19 PRAD TCGA-HC-8265-01A 10 2 In-Frame Inter-chr q11.2 q35.1 Seq+ 73348 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SS18-SSX1 SS18 chr18 23612363 - SSX1 chrX 48123217 + Exonic hg19 SARC TCGA-DX-AB3B-01A 187 217 In-Frame Inter-chr q11.2 p11.23 Oncogene KB Pub Seq+ 73349 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SS18-SSX1 SS18 chr18 23612363 - SSX1 chrX 48123217 + Exonic hg19 SARC TCGA-MJ-A850-01A 169 213 In-Frame Inter-chr q11.2 p11.23 Oncogene KB Pub Seq+ 73350 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SS18-SSX1 SS18 chr18 23612363 - SSX1 chrX 48123217 + Exonic hg19 SARC TCGA-X6-A8C7-01A 149 180 In-Frame Inter-chr q11.2 p11.23 Oncogene KB Pub Seq+ 73351 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SS18-ZNF521 SS18 chr18 23658040 - ZNF521 chr18 22672045 - Exonic hg19 SARC TCGA-DX-AATS-01A 3 4 Out-of-frame Intra-chr q11.2 q11.2 Oncogene Transcription factor Seq+ 73352 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SS18L1-CDH4 SS18L1 chr20 60718945 - CDH4 chr20 60469966 + Exonic hg19 BRCA TCGA-E2-A1LL-01A 140 57 In-Frame Intra-chr q13.33 q13.33 Tumor suppressor gene Seq+ 73353 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SSBP1-PPP6R3 SSBP1 chr7 141450184 - PPP6R3 chr11 68315535 + Exonic hg19 LUSC TCGA-O2-A5IB-01A 8 3 5'UTR-CDS Inter-chr q13.2 73354 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SSBP2-LGALS2 SSBP2 chr5 80911292 - LGALS2 chr22 37967938 - Exonic hg19 SKCM TCGA-BF-A5EQ-01A 5 11 In-Frame Inter-chr q14.1 Tumor suppressor gene q13.1 Seq+ 73355 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SSBP2-NTRK1 SSBP2 chr5 80742687 - NTRK1 chr1 156845312 + Exonic hg19 THCA TCGA-CE-A3MD-01A 154 81 In-Frame Inter-chr q14.1 Tumor suppressor gene q23.1 Oncogene Seq+ 73356 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SSBP2-SERINC5 SSBP2 chr5 80762793 - SERINC5 chr5 79407525 - Exonic hg19 OV TCGA-04-1542-01A 2 5 CDS-3'UTR Intra-chr q14.1 Tumor suppressor gene q14.1 Seq+ 73357 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SSBP3-EDA SSBP3 chr1 54867534 - EDA chrX 69080688 + Exonic hg19 BLCA TCGA-HQ-A2OE-01A 8 33 In-Frame Inter-chr p32.3 q13.1 Seq+ 73358 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SSFA2-PTPN4 SSFA2 chr2 182787139 - PTPN4 chr2 120620112 + Exonic hg19 PRAD TCGA-J4-A67T-01A 2 2 In-Frame Intra-chr q31.3 q14.2 Seq+ 73359 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SSH2-BLMH SSH2 chr17 28256956 - BLMH chr17 28601215 - Exonic hg19 CESC TCGA-EA-A556-01A 3 1 In-Frame Intra-chr q11.2 q11.2 Seq+ 73360 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SSH2-C10orf54 SSH2 chr17 28256956 - C10orf54 chr10 73521783 - Exonic hg19 SKCM TCGA-EE-A2MI-06A 19 19 Out-of-frame Inter-chr q11.2 Seq+ 73361 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SSH2-RUNDC3A SSH2 chr17 28022477 - RUNDC3A chr17 42393753 + Exonic hg19 CESC TCGA-VS-A8EJ-01A 52 54 Out-of-frame Intra-chr q11.2 q21.31 Seq+ 73362 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SSH2-SLC6A4 SSH2 chr17 28120912 - SLC6A4 chr17 28549933 - Exonic hg19 STAD TCGA-VQ-A925-01A 9 16 CDS-3'UTR Intra-chr q11.2 q11.2 Seq+ 73363 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SSH3-KDM2A SSH3 chr11 67075929 - KDM2A chr11 66985202 + Exonic hg19 BRCA TCGA-A7-A13D-01B 4 1 Out-of-frame Intra-chr q13.2 q13.2 Transcription factor Seq+ 73364 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SSPN-PKP2 SSPN chr12 26275085 - PKP2 chr12 32949232 - Exonic hg19 READ TCGA-DC-4745-01A 4 2 5'UTR-CDS Intra-chr p12.1 p11.21 Seq+ 73365 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SSPN-TEAD4 SSPN chr12 26287963 - TEAD4 chr12 3103904 + Exonic hg19 LGG TCGA-TM-A84I-01A 6 21 5'UTR-5'UTR Intra-chr p12.1 p13.33 Transcription factor Seq+ 73366 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SSR1-CAGE1 SSR1 chr6 7301543 - CAGE1 chr6 7330121 - Exonic hg19 BRCA TCGA-A2-A0CX-01A 1323 1167 Out-of-frame Intra-chr p24.3 p24.3 Seq+ 73367 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SSR1-DMD SSR1 chr6 7310150 - DMD chrX 32328393 - Exonic hg19 GBM TCGA-06-2569-01A 10 49 In-Frame Inter-chr p24.3 p21.1 Tumor suppressor gene Seq+ 73368 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SSR1-FARS2 SSR1 chr6 7303783 - FARS2 chr6 5545413 + Exonic hg19 LUAD TCGA-62-A46S-01A 473 190 In-Frame Intra-chr p24.3 p25.1 Seq+ 73369 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SSR1-NTF3 SSR1 chr6 7290101 - NTF3 chr12 5603360 + Exonic hg19 SARC TCGA-PC-A5DN-01A 3 3 Out-of-frame Inter-chr p24.3 p13.31 Seq+ 73370 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SSR2-SUPT16H SSR2 chr1 155978839 - SUPT16H chr14 21829491 - Exonic hg19 STAD TCGA-BR-8687-01A 2 2 3'UTR-CDS Inter-chr q22 q11.2 73371 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SSRP1-MED19 SSRP1 chr11 57101937 - MED19 chr11 57472701 - Exonic hg19 OV TCGA-24-1560-01A 3 6 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 73372 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SSSCA1-FRMD8 SSSCA1 chr11 65338441 - FRMD8 chr11 65178713 + Exonic hg19 LIHC TCGA-EP-A12J-01A 4 2 In-Frame Intra-chr q13.1 q13.1 Seq+ 73373 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST14-APLP2 ST14 chr11 130078579 - APLP2 chr11 130010293 + Exonic hg19 UCEC TCGA-B5-A3S1-01A 16 13 In-Frame Intra-chr q24.3 q24.3 Seq+ 73374 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST14-APLP2 ST14 chr11 130029955 - APLP2 chr11 129979324 + Exonic hg19 PRAD TCGA-HC-8265-01A 11 5 In-Frame Intra-chr q24.3 q24.3 Seq+ 73375 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST14-BARX2 ST14 chr11 130029955 - BARX2 chr11 129306646 + Exonic hg19 BRCA TCGA-D8-A1JM-01A 19 18 Out-of-frame Intra-chr q24.3 q24.3 Transcription factor Seq+ 73376 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST14-ST7 ST14 chr11 130029955 - ST7 chr7 116739816 + Exonic hg19 BRCA TCGA-AR-A256-01A 57 27 Out-of-frame Inter-chr q24.3 q31.2 Tumor suppressor gene Seq+ 73377 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST3GAL1-COL22A1 ST3GAL1 chr8 134487962 - COL22A1 chr8 139715590 - Exonic hg19 BRCA TCGA-AO-A1KR-01A 11 5 In-Frame Intra-chr q24.22 q24.3 Seq+ 73378 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST3GAL1-EEA1 ST3GAL1 chr8 134467091 - EEA1 chr12 93229203 - Exonic hg19 BRCA TCGA-S3-AA0Z-01A 2 3 3'UTR-CDS Inter-chr q24.22 q22 Transcription factor 73379 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST3GAL2-COG4 ST3GAL2 chr16 70422270 - COG4 chr16 70534994 - Exonic hg19 OV TCGA-13-1411-01A 4 3 In-Frame Intra-chr q22.1 q22.1 Seq+ 73380 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST3GAL2-COG4 ST3GAL2 chr16 70472852 - COG4 chr16 70517872 - Exonic hg19 ESCA TCGA-L5-A4OJ-01A 5 18 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 73381 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST3GAL3-GLCCI1 ST3GAL3 chr1 44202051 - GLCCI1 chr7 8124527 + Exonic hg19 PCPG TCGA-WB-A81P-01A 17 10 In-Frame Inter-chr p34.1 p21.3 Seq+ 73382 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST3GAL3-KDM4A ST3GAL3 chr1 44173364 - KDM4A chr1 44169288 + Exonic hg19 BRCA TCGA-PL-A8LZ-01A 2 1 5'UTR-CDS Intra-chr p34.1 p34.2 73383 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST3GAL3-PTPRF ST3GAL3 chr1 44280605 - PTPRF chr1 44069087 + Exonic hg19 ESCA TCGA-LN-A7HV-01A 3 28 Out-of-frame Intra-chr p34.1 p34.2 Seq+ 73384 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST3GAL3-TAL1 ST3GAL3 chr1 44303983 - TAL1 chr1 47685846 - Exonic hg19 BRCA TCGA-BH-A1FC-01A 10 6 Out-of-frame Intra-chr p34.1 p33 Oncogene Transcription factor Seq+ 73385 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST3GAL3-TGFBR3 ST3GAL3 chr1 44257820 - TGFBR3 chr1 92195530 - Exonic hg19 LIHC TCGA-LG-A6GG-01A 15 1 In-Frame Intra-chr p34.1 p22.1 Tumor suppressor gene 73386 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST3GAL3-TIE1 ST3GAL3 chr1 44303983 - TIE1 chr1 43770522 + Exonic hg19 UCEC TCGA-BK-A139-02A 4 1 Out-of-frame Intra-chr p34.1 p34.2 TK:Tie 73387 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST3GAL3-ZMAT4 ST3GAL3 chr1 44202051 - ZMAT4 chr8 40389757 - Exonic hg19 BLCA TCGA-2F-A9KP-01A 26 21 Out-of-frame Inter-chr p34.1 p11.21 Transcription factor Seq+ 73388 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST3GAL4-C11orf70 ST3GAL4 chr11 126279306 - C11orf70 chr11 101929611 + Exonic hg19 ESCA TCGA-IG-A3I8-01A 4 95 In-Frame Intra-chr q24.2 q22.1 Seq+ 73389 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST3GAL4-FGF19 ST3GAL4 chr11 126225737 - FGF19 chr11 69518132 - Exonic hg19 ESCA TCGA-IG-A3I8-01A 9 47 5'UTR-CDS Intra-chr q24.2 q13.3 Seq+ 73390 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST3GAL4-HYLS1 ST3GAL4 chr11 126226197 - HYLS1 chr11 125768999 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 3 1 5'UTR-5'UTR Intra-chr q24.2 q24.2 Seq+ 73391 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST3GAL4-ZW10 ST3GAL4 chr11 126225737 - ZW10 chr11 113619142 - Exonic hg19 SARC TCGA-3B-A9HL-01A 19 29 5'UTR-CDS Intra-chr q24.2 q23.2 Seq+ 73392 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST5-DENND5A ST5 chr11 8772168 - DENND5A chr11 9163655 - Exonic hg19 BRCA TCGA-B6-A0X1-01A 7 1 Out-of-frame Intra-chr p15.4 Tumor suppressor gene p15.4 Seq+ 73393 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST5-DENND5A ST5 chr11 8853103 - DENND5A chr11 9171756 - Exonic hg19 SKCM TCGA-W3-AA1V-06B 28 23 5'UTR-CDS Intra-chr p15.4 Tumor suppressor gene p15.4 Seq+ 73394 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST5-TMEM9B ST5 chr11 8832794 - TMEM9B chr11 8983730 - Exonic hg19 LUSC TCGA-56-8625-01A 17 7 5'UTR-CDS Intra-chr p15.4 Tumor suppressor gene p15.4 Seq+ 73395 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST6GAL1-KNG1 ST6GAL1 chr3 186761098 - KNG1 chr3 186461494 + Exonic hg19 LUAD TCGA-55-6972-01A 2 2 Out-of-frame Intra-chr q27.3 q27.3 Seq+ 73396 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST6GAL1-LPP ST6GAL1 chr3 186681714 - LPP chr3 188583988 + Exonic hg19 KIRP TCGA-DZ-6131-01A 28 13 5'UTR-CDS Intra-chr q27.3 q27.3 Oncogene 73397 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST6GAL1-PSMC3 ST6GAL1 chr3 186681714 - PSMC3 chr11 47447501 - Exonic hg19 PRAD TCGA-J4-A67R-01A 29 15 5'UTR-CDS Inter-chr q27.3 p11.2 Seq+ 73398 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST6GAL1-TBCCD1 ST6GAL1 chr3 186681714 - TBCCD1 chr3 186282161 - Exonic hg19 LUSC TCGA-34-5241-01A 8 7 5'UTR-5'UTR Intra-chr q27.3 q27.3 Seq+ 73399 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST6GALNAC2-BRIP1 ST6GALNAC2 chr17 74574838 - BRIP1 chr17 59820495 - Exonic hg19 BLCA TCGA-K4-A3WU-01B 2 2 Out-of-frame Intra-chr q25.1 q23.2 Oncogene Seq+ 73400 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST6GALNAC2-JMJD6 ST6GALNAC2 chr17 74574838 - JMJD6 chr17 74716580 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 39 28 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 73401 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST6GALNAC3-AK5 ST6GALNAC3 chr1 76540569 - AK5 chr1 77949002 + Exonic hg19 LUSC TCGA-LA-A7SW-01A 5 4 In-Frame Intra-chr p31.1 p31.1 Seq+ 73402 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST7-ASZ1 ST7 chr7 116593745 - ASZ1 chr7 117025863 - Exonic hg19 LUAD TCGA-86-8672-01A 56 31 Out-of-frame Intra-chr q31.2 Tumor suppressor gene q31.2 Seq+ 73403 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST7-CAV1 ST7 chr7 116593745 - CAV1 chr7 116199000 + Exonic hg19 GBM TCGA-06-0184-01A 45 154 Out-of-frame Intra-chr q31.2 Tumor suppressor gene q31.2 Tumor suppressor gene Seq+ 73404 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST7-CNTNAP2 ST7 chr7 116849991 - CNTNAP2 chr7 147869334 + Exonic hg19 SARC TCGA-DX-AATS-01A 15 2 In-Frame Intra-chr q31.2 Tumor suppressor gene Tumor suppressor gene 73405 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST7-COG5 ST7 chr7 116593745 - COG5 chr7 107053077 - Exonic hg19 LIHC TCGA-RC-A6M6-01A 241 152 In-Frame Intra-chr q31.2 Tumor suppressor gene Seq+ 73406 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST7-FOXP2 ST7 chr7 116593745 - FOXP2 chr7 114066557 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 20 15 CDS-5'UTR Intra-chr q31.2 Tumor suppressor gene q31.1 Transcription factor Seq+ 73407 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST7-MET ST7 chr7 116593745 - MET chr7 116339125 + Exonic hg19 TGCT TCGA-2G-AAH8-01A 2 1 CDS-5'UTR Intra-chr q31.2 Tumor suppressor gene q31.2 TK:Met Oncogene Seq+ 73408 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST7-MET ST7 chr7 116593745 - MET chr7 116339125 + Exonic hg19 LUAD TCGA-38-4628-01A 6 5 CDS-5'UTR Intra-chr q31.2 Tumor suppressor gene q31.2 TK:Met Oncogene Seq+ 73409 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST7-MET ST7 chr7 116830990 - MET chr7 116371722 + Exonic hg19 LIHC TCGA-DD-AAE2-01A 10 4 In-Frame Intra-chr q31.2 Tumor suppressor gene q31.2 TK:Met Oncogene Seq+ 73410 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST7-MET ST7 chr7 116660683 - MET chr7 116339125 + Exonic hg19 LGG TCGA-HT-A5R7-01A 4 2 CDS-5'UTR Intra-chr q31.2 Tumor suppressor gene q31.2 TK:Met Oncogene Seq+ 73411 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST7-PTPRZ1 ST7 chr7 116593745 - PTPRZ1 chr7 121568210 + Exonic hg19 PRAD TCGA-2A-A8W1-01A 23 13 In-Frame Intra-chr q31.2 Tumor suppressor gene q31.32 Seq+ 73412 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST7-TBXAS1 ST7 chr7 116593745 - TBXAS1 chr7 139706891 + Exonic hg19 SARC TCGA-DX-AB37-01A 10 9 Out-of-frame Intra-chr q31.2 Tumor suppressor gene q34 Seq+ 73413 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST7L-AP2A2 ST7L chr1 113161531 - AP2A2 chr11 1009100 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 2 1 Out-of-frame Inter-chr p13.2 p15.5 Seq+ 73414 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST7L-PRPF6 ST7L chr1 113153463 - PRPF6 chr20 62616260 + Exonic hg19 BRCA TCGA-A2-A0CT-01A 2 4 Out-of-frame Inter-chr p13.2 q13.33 73415 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST7OT4-ASZ1 ST7OT4 chr7 116595207 - ASZ1 chr7 117025863 - Exonic hg19 LUAD TCGA-86-8672-01A 33 18 Out-of-frame Intra-chr q31.2 73416 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST7OT4-CAPZA2 ST7OT4 chr7 116595207 - CAPZA2 chr7 116556114 + Exonic hg19 LIHC TCGA-DD-AACN-01A 12 3 Out-of-frame Intra-chr q31.2 73417 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST7OT4-CAPZA2 ST7OT4 chr7 116595207 - CAPZA2 chr7 116556114 + Exonic hg19 KICH TCGA-KL-8341-01A 68 18 Out-of-frame Intra-chr q31.2 73418 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST7OT4-CAPZA2 ST7OT4 chr7 116595207 - CAPZA2 chr7 116556114 + Exonic hg19 PRAD TCGA-V1-A9OL-01A 10 2 Out-of-frame Intra-chr q31.2 73419 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST7OT4-COG5 ST7OT4 chr7 116595207 - COG5 chr7 107053077 - Exonic hg19 LIHC TCGA-RC-A6M6-01A 5 2 Out-of-frame Intra-chr 73420 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST8SIA1-AEBP2 ST8SIA1 chr12 22401940 - AEBP2 chr12 19665332 + Exonic hg19 SKCM TCGA-ER-A193-06A 8 11 Out-of-frame Intra-chr p12.1 p12.3 Transcription factor Seq+ 73421 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST8SIA1-FTO ST8SIA1 chr12 22401940 - FTO chr16 54145674 + Exonic hg19 LGG TCGA-TM-A84I-01A 30 13 In-Frame Inter-chr p12.1 q12.2 Seq+ 73422 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ST8SIA1-IFLTD1 ST8SIA1 chr12 22401940 - IFLTD1 chr12 25702480 - Exonic hg19 BRCA TCGA-AR-A2LM-01A 4 5 In-Frame Intra-chr p12.1 Tumor suppressor gene Seq+ 73423 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAG1-ANKS1B STAG1 chr3 136183723 - ANKS1B chr12 99548173 - Exonic hg19 SARC TCGA-DX-A23Y-01A 6 2 Out-of-frame Inter-chr q22.3 q23.1 Seq+ 73424 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAG1-CCDC77 STAG1 chr3 136471037 - CCDC77 chr12 514677 + Exonic hg19 BRCA TCGA-AO-A129-01A 4 4 5'UTR-5'UTR Inter-chr q22.3 p13.33 Seq+ 73425 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAG1-FAM168A STAG1 chr3 136471037 - FAM168A chr11 73179537 - Exonic hg19 UCEC TCGA-BG-A3PP-01A 18 24 5'UTR-5'UTR Inter-chr q22.3 q13.4 Seq+ 73426 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAG1-ISY1 STAG1 chr3 136471037 - ISY1 chr3 128859328 - Exonic hg19 BRCA TCGA-AR-A251-01A 229 169 5'UTR-CDS Intra-chr q22.3 q21.3 Seq+ 73427 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAG1-NCK1 STAG1 chr3 136221470 - NCK1 chr3 136646826 + Exonic hg19 LUSC TCGA-94-8035-01A 7 3 CDS-5'UTR Intra-chr q22.3 q22.3 Seq+ 73428 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAG1-P2RY13 STAG1 chr3 136471037 - P2RY13 chr3 151046795 - Exonic hg19 SKCM TCGA-D3-A3BZ-06A 5 2 5'UTR-CDS Intra-chr q22.3 q25.1 73429 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAG1-SPSB4 STAG1 chr3 136117591 - SPSB4 chr3 140865984 + Exonic hg19 HNSC TCGA-UF-A7JA-01A 3 5 Out-of-frame Intra-chr q22.3 q23 Seq+ 73430 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAG2-AMMECR1 STAG2 chrX 123094716 - AMMECR1 chrX 109507827 - Exonic hg19 BLCA TCGA-GC-A4ZW-01A 2 2 5'UTR-CDS Intra-chr q25 Oncogene q23 Seq+ 73431 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAG2-C16orf45 STAG2 chrX 123220620 - C16orf45 chr16 15609162 + Exonic hg19 LUAD TCGA-69-7979-01A 5 3 In-Frame Inter-chr q25 Oncogene Seq+ 73432 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAG2-FAM49B STAG2 chrX 123164975 - FAM49B chr8 130916831 - Exonic hg19 SARC TCGA-X6-A8C2-01A 2 2 CDS-5'UTR Inter-chr q25 Oncogene q24.21 73433 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAG2-GRIA3 STAG2 chrX 123164975 - GRIA3 chrX 122459877 + Exonic hg19 LUAD TCGA-55-7913-01B 8 5 Out-of-frame Intra-chr q25 Oncogene q25 Seq+ 73434 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAG2-MTCP1NB STAG2 chrX 123095706 - MTCP1NB chrX 154292308 - Exonic hg19 BRCA TCGA-AO-A0JF-01A 3 1 5'UTR-5'UTR Intra-chr q25 Oncogene 73435 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAG2-RGAG1 STAG2 chrX 123094716 - RGAG1 chrX 109693795 + Exonic hg19 BLCA TCGA-GC-A4ZW-01A 288 86 5'UTR-5'UTR Intra-chr q25 Oncogene Seq+ 73436 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAG2-XIAP STAG2 chrX 123094716 - XIAP chrX 123034343 + Exonic hg19 BRCA TCGA-A2-A25B-01A 2 2 5'UTR-5'UTR Intra-chr q25 Oncogene q25 Seq+ 73437 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAM-EPYC STAM chr10 17686378 - EPYC chr12 91372039 - Exonic hg19 SARC TCGA-DX-A1L4-01A 17 11 Out-of-frame Inter-chr p12.33 q21.33 Seq+ 73438 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAM-PTPLA STAM chr10 17702547 - PTPLA chr10 17646046 - Exonic hg19 BRCA TCGA-BH-A1ES-06A 18 12 In-Frame Intra-chr p12.33 Seq+ 73439 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAM2-NOSTRIN STAM2 chr2 153032117 - NOSTRIN chr2 169687982 + Exonic hg19 BLCA TCGA-GD-A3OS-01A 29 28 Out-of-frame Intra-chr q23.3 Seq+ 73440 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAM2-THSD7B STAM2 chr2 152982740 - THSD7B chr2 137813990 + Exonic hg19 BRCA TCGA-BH-A0C7-01B 13 14 Out-of-frame Intra-chr q23.3 q22.1 Seq+ 73441 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAMBPL1-ATAD1 STAMBPL1 chr10 90661495 - ATAD1 chr10 89516679 - Exonic hg19 GBM TCGA-06-0648-01A 6 13 In-Frame Intra-chr q23.31 73442 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STARD10-CLTCL1 STARD10 chr11 72492020 - CLTCL1 chr22 19263353 - Exonic hg19 SKCM TCGA-EB-A3Y6-01A 3 1 In-Frame Inter-chr q13.4 q11.21 Seq+ 73443 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STARD10-ZC3H12C STARD10 chr11 72492020 - ZC3H12C chr11 110007388 + Exonic hg19 KICH TCGA-KL-8339-01A 5 7 In-Frame Intra-chr q13.4 q22.3 Seq+ 73444 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STARD13-KLF5 STARD13 chr13 33859607 - KLF5 chr13 73635999 + Exonic hg19 PRAD TCGA-HC-7233-01A 3 3 Out-of-frame Intra-chr q13.1 Tumor suppressor gene q22.1 Tumor suppressor gene Transcription factor 73445 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STARD13-TNFRSF8 STARD13 chr13 33859607 - TNFRSF8 chr1 12169623 + Exonic hg19 BRCA TCGA-BH-A0C7-01B 6 3 CDS-3'UTR Inter-chr q13.1 Tumor suppressor gene p36.22 Seq+ 73446 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STARD3-ABR STARD3 chr17 37793484 - ABR chr17 973330 - Exonic hg19 BLCA TCGA-FD-A6TH-01A 5 5 5'UTR-CDS Intra-chr q12 p13.3 Seq+ 73447 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STARD3-C17orf98 STARD3 chr17 37810003 - C17orf98 chr17 36991599 - Exonic hg19 BRCA TCGA-D8-A1XJ-01A 140 89 Out-of-frame Intra-chr q12 q12 Seq+ 73448 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STARD3-FAM20A STARD3 chr17 37793484 - FAM20A chr17 66548092 - Exonic hg19 BRCA TCGA-3C-AALI-01A 12 14 5'UTR-CDS Intra-chr q12 q24.2 Seq+ 73449 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STARD3-FBXL20 STARD3 chr17 37817338 - FBXL20 chr17 37459892 - Exonic hg19 BRCA TCGA-3C-AALI-01A 10 10 In-Frame Intra-chr q12 q12 Seq+ 73450 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STARD3-GSDMB STARD3 chr17 37793484 - GSDMB chr17 38061217 - Exonic hg19 LUAD TCGA-38-4630-01A 8 5 5'UTR-CDS Intra-chr q12 q21.1 Seq+ 73451 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STARD3-IKZF3 STARD3 chr17 37793484 - IKZF3 chr17 37988404 - Exonic hg19 ESCA TCGA-2H-A9GF-01A 35 240 5'UTR-CDS Intra-chr q12 q21.1 Tumor suppressor gene Transcription factor Seq+ 73452 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STARD3-JUP STARD3 chr17 37793484 - JUP chr17 39928114 - Exonic hg19 STAD TCGA-VQ-A91S-01A 41 1118 5'UTR-5'UTR Intra-chr q12 q21.2 Tumor suppressor gene Seq+ 73453 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STARD3-PPP1R1B STARD3 chr17 37793484 - PPP1R1B chr17 37785423 + Exonic hg19 BLCA TCGA-XF-A9SW-01A 3 3 5'UTR-5'UTR Intra-chr q12 q12 Tumor suppressor gene Seq+ 73454 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STARD3-STRADA STARD3 chr17 37793484 - STRADA chr17 61791468 - Exonic hg19 BRCA TCGA-C8-A275-01A 8 23 5'UTR-5'UTR Intra-chr q12 q23.3 Tumor suppressor gene Seq+ 73455 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STARD4-ASTN2 STARD4 chr5 110836700 - ASTN2 chr9 119770538 - Exonic hg19 PAAD TCGA-IB-7893-01A 2 1 In-Frame Inter-chr q22.1 q33.1 Seq+ 73456 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STARD7-LRRN1 STARD7 chr2 96858980 - LRRN1 chr3 3886048 + Exonic hg19 BLCA TCGA-KQ-A41P-01A 3 3 CDS-5'UTR Inter-chr q11.2 p26.2 Seq+ 73457 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAT1-SUMO1 STAT1 chr2 191839556 - SUMO1 chr2 203075529 - Exonic hg19 SARC TCGA-DX-A8BG-01A 42 288 In-Frame Intra-chr q32.2 Tumor suppressor gene Transcription factor q33.1 Seq+ 73458 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAT3-ETV4 STAT3 chr17 40468807 - ETV4 chr17 41611353 - Exonic hg19 PRAD TCGA-EJ-5511-01A 301 125 In-Frame Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q21.31 Oncogene Transcription factor Seq+ 73459 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAT3-NOS2 STAT3 chr17 40540297 - NOS2 chr17 26116714 - Exonic hg19 ESCA TCGA-L5-A4OW-01A 4 72 5'UTR-CDS Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q11.2 Seq+ 73460 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAT4-CXCR7 STAT4 chr2 192011339 - CXCR7 chr2 237489083 + Exonic hg19 LUAD TCGA-05-4398-01A 103 53 CDS-5'UTR Intra-chr q32.3 Transcription factor Seq+ 73461 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAT5A-ARNTL2 STAT5A chr17 40447811 - ARNTL2 chr12 27538414 + Exonic hg19 LUAD TCGA-J2-A4AD-01A 2 1 In-Frame Inter-chr q21.2 Tumor suppressor gene Transcription factor p11.23 Transcription factor 73462 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAT5B-NSRP1 STAT5B chr17 40428266 - NSRP1 chr17 28499560 + Exonic hg19 ESCA TCGA-L5-A4OX-01A 2 27 5'UTR-CDS Intra-chr q21.2 Transcription factor q11.2 Seq+ 73463 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAT5B-ODZ4 STAT5B chr17 40368032 - ODZ4 chr11 78926954 - Exonic hg19 SARC TCGA-DX-A3M1-01A 3 3 CDS-5'UTR Inter-chr q21.2 Transcription factor 73464 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAT5B-PFAS STAT5B chr17 40362189 - PFAS chr17 8166238 + Exonic hg19 PRAD TCGA-HC-A8D0-01A 4 5 In-Frame Intra-chr q21.2 Transcription factor p13.1 Seq+ 73465 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAT5B-STAT3 STAT5B chr17 40354358 - STAT3 chr17 40477079 - Exonic hg19 ESCA TCGA-L5-A8NE-01A 3 7 Out-of-frame Intra-chr q21.2 Transcription factor q21.2 Oncogene Tumor suppressor gene Transcription factor 73466 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAU1-CYP26B1 STAU1 chr20 47768119 - CYP26B1 chr2 72362548 - Exonic hg19 PRAD TCGA-XJ-A9DI-01A 3 2 In-Frame Inter-chr q13.13 p13.2 Seq+ 73467 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAU1-MAP1LC3A STAU1 chr20 47768119 - MAP1LC3A chr20 33137709 + Exonic hg19 STAD TCGA-VQ-A8PH-01A 5 20 CDS-5'UTR Intra-chr q13.13 q11.22 Seq+ 73468 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAU1-MRPL4 STAU1 chr20 47790732 - MRPL4 chr19 10363073 + Exonic hg19 BRCA TCGA-AR-A1AO-01A 48 25 5'UTR-CDS Inter-chr q13.13 p13.2 Seq+ 73469 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAU1-PLCE1 STAU1 chr20 47804653 - PLCE1 chr10 95790440 + Exonic hg19 LUSC TCGA-39-5040-01A 31 25 5'UTR-5'UTR Inter-chr q13.13 q23.33 Tumor suppressor gene 73470 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAU2-MSI2 STAU2 chr8 74650519 - MSI2 chr17 55334459 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 11 13 Out-of-frame Inter-chr q21.11 q22 Seq+ 73471 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAU2-MTFR1 STAU2 chr8 74650519 - MTFR1 chr8 66631615 + Exonic hg19 PRAD TCGA-XK-AAIV-01A 3 3 CDS-3'UTR Intra-chr q21.11 q13.1 73472 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAU2-OSBPL2 STAU2 chr8 74507401 - OSBPL2 chr20 60831113 + Exonic hg19 SKCM TCGA-EE-A2MH-06A 3 2 CDS-5'UTR Inter-chr q21.11 q13.33 Seq+ 73473 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAU2-PLEKHF2 STAU2 chr8 74585342 - PLEKHF2 chr8 96166259 + Exonic hg19 READ TCGA-F5-6813-01A 5 7 CDS-5'UTR Intra-chr q21.11 q22.1 Seq+ 73474 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAU2-RALYL STAU2 chr8 74659018 - RALYL chr8 85785519 + Exonic hg19 LIHC TCGA-EP-A12J-01A 7 28 5'UTR-CDS Intra-chr q21.11 q21.2 Seq+ 73475 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STAU2-RP11-240B13.2 STAU2 chr8 74650519 - RP11-240B13.2 chr8 133067320 - Exonic hg19 BRCA TCGA-BH-A0C0-01A 5 1 Out-of-frame Intra-chr q21.11 73476 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STC2-TYK2 STC2 chr5 172741716 - TYK2 chr19 10491352 - Exonic hg19 BRCA TCGA-A8-A06Y-01A 2 2 Out-of-frame Inter-chr q35.2 p13.2 TK:JakA 73477 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STIM1-ANO9 STIM1 chr11 4045217 - ANO9 chr11 434098 - Exonic hg19 LGG TCGA-TQ-A7RV-01A 2 2 Out-of-frame Intra-chr p15.4 p15.5 Seq+ 73478 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STIM1-CLIP1 STIM1 chr11 3877639 - CLIP1 chr12 122773088 - Exonic hg19 UCEC TCGA-D1-A3DG-01A 8 6 Out-of-frame Inter-chr p15.4 q24.31 Seq+ 73479 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STIM1-FITM2 STIM1 chr11 4104212 - FITM2 chr20 42935880 - Exonic hg19 BRCA TCGA-A8-A07W-01A 21 8 In-Frame Inter-chr p15.4 q13.12 Seq+ 73480 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STIM1-GPR160 STIM1 chr11 3877639 - GPR160 chr3 169756703 + Exonic hg19 UCEC TCGA-AJ-A3QS-01A 5 5 CDS-5'UTR Inter-chr p15.4 q26.2 Seq+ 73481 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STIM1-NUP98 STIM1 chr11 3968954 - NUP98 chr11 3765879 - Exonic hg19 LUAD TCGA-93-A4JP-01A 6 4 Out-of-frame Intra-chr p15.4 p15.4 Oncogene Tumor suppressor gene Seq+ 73482 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STIM1-PGAP2 STIM1 chr11 3877639 - PGAP2 chr11 3829524 + Exonic hg19 SKCM TCGA-EE-A29D-06A 5 8 In-Frame Intra-chr p15.4 p15.4 Seq+ 73483 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STIM1-PNPLA2 STIM1 chr11 3877639 - PNPLA2 chr11 821628 + Exonic hg19 SKCM TCGA-GN-A8LK-06A 20 11 In-Frame Intra-chr p15.4 p15.5 Seq+ 73484 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STIM1-RP11-150O12.1 STIM1 chr11 3877639 - RP11-150O12.1 chr8 37279087 - Exonic hg19 BLCA TCGA-XF-A9SU-01A 5 5 Out-of-frame Inter-chr p15.4 73485 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STIM1-VHL STIM1 chr11 3877639 - VHL chr3 10191471 + Exonic hg19 LUSC TCGA-66-2766-01A 14 2 In-Frame Inter-chr p15.4 p25.3 Oncogene Tumor suppressor gene Seq+ 73486 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STIM2-GATAD2A STIM2 chr4 26921256 - GATAD2A chr19 19576149 + Exonic hg19 LUSC TCGA-22-A5C4-01A 28 30 CDS-5'UTR Inter-chr p15.2 p13.11 Transcription factor Seq+ 73487 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STIM2-KIAA0146 STIM2 chr4 27019606 - KIAA0146 chr8 48192450 + Exonic hg19 LUAD TCGA-55-A48Z-01A 2 1 Out-of-frame Inter-chr p15.2 73488 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STIP1-PC STIP1 chr11 63967765 - PC chr11 66719939 - Exonic hg19 LUSC TCGA-77-8148-01A 8 7 CDS-5'UTR Intra-chr q13.1 q13.2 Seq+ 73489 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STIP1-UBE2G1 STIP1 chr11 63953742 - UBE2G1 chr17 4210418 - Exonic hg19 HNSC TCGA-D6-A74Q-01A 26 17 Out-of-frame Inter-chr q13.1 p13.2 Seq+ 73490 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK10-SH3PXD2B STK10 chr5 171583628 - SH3PXD2B chr5 171849500 - Exonic hg19 BRCA TCGA-BH-A18T-01A 15 8 In-Frame Intra-chr q35.1 Tumor suppressor gene q35.1 Seq+ 73491 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK10-SNX2 STK10 chr5 171614891 - SNX2 chr5 122161745 + Exonic hg19 BRCA TCGA-BH-A0HL-01A 29 14 In-Frame Intra-chr q35.1 Tumor suppressor gene q23.2 Seq+ 73492 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK10-UBTD2 STK10 chr5 171544485 - UBTD2 chr5 171661362 - Exonic hg19 ESCA TCGA-2H-A9GJ-01A 3 7 In-Frame Intra-chr q35.1 Tumor suppressor gene q35.1 Seq+ 73493 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK11-C19orf26 STK11 chr19 1207202 - C19orf26 chr19 1231274 - Exonic hg19 BLCA TCGA-DK-AA6R-01A 4 5 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene 73494 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK11-HMHA1 STK11 chr19 1222005 - HMHA1 chr19 1080254 + Exonic hg19 LUAD TCGA-NJ-A4YF-01A 30 25 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene Seq+ 73495 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK11-KDM4B STK11 chr19 1207202 - KDM4B chr19 5032877 + Exonic hg19 BRCA TCGA-OL-A5D7-01A 30 11 CDS-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 73496 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK11-SMARCD2 STK11 chr19 1207202 - SMARCD2 chr17 61914985 - Exonic hg19 BRCA TCGA-OL-A66I-01A 9 2 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene q23.3 Seq+ 73497 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK11-SRFBP1 STK11 chr19 1207202 - SRFBP1 chr5 121354955 + Exonic hg19 LUAD TCGA-62-8395-01A 5 6 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene q23.1 Seq+ 73498 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK16-PLCD4 STK16 chr2 220112479 - PLCD4 chr2 219496859 + Exonic hg19 STAD TCGA-CG-4443-01A 25 33 In-Frame Intra-chr q35 q35 Seq+ 73499 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK17B-HECW2 STK17B chr2 197008284 - HECW2 chr2 197208488 - Exonic hg19 BRCA TCGA-AR-A256-01A 2 4 In-Frame Intra-chr q32.3 q32.3 Seq+ 73500 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK19-LY6G6D STK19 chr6 31947330 - LY6G6D chr6 31683279 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 44 1 5'UTR-CDS Intra-chr Seq+ 73501 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK19-XXbac-BPG32J3.19 STK19 chr6 31947330 - XXbac-BPG32J3.19 chr6 31683279 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 43 22 Out-of-frame Intra-chr 73502 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK24-ATF7 STK24 chr13 99228999 - ATF7 chr12 53994805 - Exonic hg19 BRCA TCGA-A7-A13D-01B 3 6 CDS-5'UTR Inter-chr q32.2 q13.13 Transcription factor Seq+ 73503 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK24-BRP44 STK24 chr13 99228999 - BRP44 chr1 167893775 - Exonic hg19 SKCM TCGA-BF-AAP7-01A 22 39 Out-of-frame Inter-chr q32.2 73504 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK24-C8orf83 STK24 chr13 99228999 - C8orf83 chr8 93929238 - Exonic hg19 LUAD TCGA-50-5941-01A 3 5 Out-of-frame Inter-chr q32.2 73505 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK24-DOCK9 STK24 chr13 99228999 - DOCK9 chr13 99462545 - Exonic hg19 LIHC TCGA-BC-A10R-01A 7 6 Out-of-frame Intra-chr q32.2 q32.3 Seq+ 73506 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK24-DOCK9 STK24 chr13 99228999 - DOCK9 chr13 99449507 - Exonic hg19 STAD TCGA-BR-8297-01A 3 20 Out-of-frame Intra-chr q32.2 q32.3 Seq+ 73507 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK24-DOCK9 STK24 chr13 99171497 - DOCK9 chr13 99532926 - Exonic hg19 STAD TCGA-VQ-AA6D-01A 6 13 In-Frame Intra-chr q32.2 q32.3 Seq+ 73508 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK24-PDE1A STK24 chr13 99228999 - PDE1A chr2 183387113 - Exonic hg19 UCEC TCGA-KP-A3VZ-01A 2 8 Out-of-frame Inter-chr q32.2 q32.1 Seq+ 73509 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK24-PIP5K1B STK24 chr13 99171497 - PIP5K1B chr9 71433377 + Exonic hg19 BRCA TCGA-AC-A5EH-01A 8 1 CDS-5'UTR Inter-chr q32.2 q21.11 73510 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK24-SLC15A1 STK24 chr13 99228999 - SLC15A1 chr13 99379113 - Exonic hg19 BLCA TCGA-4Z-AA87-01A 4 6 Out-of-frame Intra-chr q32.2 q32.3 Seq+ 73511 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK24-SLC15A1 STK24 chr13 99228999 - SLC15A1 chr13 99379113 - Exonic hg19 READ TCGA-AF-5654-01A 2 6 Out-of-frame Intra-chr q32.2 q32.3 Seq+ 73512 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK24-SLC15A1 STK24 chr13 99228999 - SLC15A1 chr13 99379113 - Exonic hg19 STAD TCGA-VQ-A928-01A 2 12 Out-of-frame Intra-chr q32.2 q32.3 Seq+ 73513 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK24-TMTC4 STK24 chr13 99228999 - TMTC4 chr13 101258681 - Exonic hg19 BLCA TCGA-BT-A2LA-01A 25 19 In-Frame Intra-chr q32.2 q32.3 Seq+ 73514 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK3-AC010859.1 STK3 chr8 99608260 - AC010859.1 chr8 97797092 + Exonic hg19 LUAD TCGA-44-6775-01C 7 25 Out-of-frame Intra-chr q22.2 73515 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK3-COX6C STK3 chr8 99718695 - COX6C chr8 100899846 - Exonic hg19 ESCA TCGA-L5-A4OT-01A 9 79 In-Frame Intra-chr q22.2 q22.2 Seq+ 73516 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK3-LRRC69 STK3 chr8 99538970 - LRRC69 chr8 92212841 + Exonic hg19 CESC TCGA-MA-AA43-01A 4 2 In-Frame Intra-chr q22.2 q21.3 Seq+ 73517 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK3-MRPL48 STK3 chr8 99837743 - MRPL48 chr11 73516072 + Exonic hg19 BLCA TCGA-DK-A1A6-01A 8 16 Out-of-frame Inter-chr q22.2 q13.4 Seq+ 73518 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK3-POLR2K STK3 chr8 99837743 - POLR2K chr8 101163575 + Exonic hg19 BRCA TCGA-E9-A5FL-01A 4 4 CDS-5'UTR Intra-chr q22.2 q22.2 Seq+ 73519 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK3-SLC26A7 STK3 chr8 99538970 - SLC26A7 chr8 92231118 + Exonic hg19 CESC TCGA-MA-AA43-01A 2 1 CDS-5'UTR Intra-chr q22.2 q21.3 Seq+ 73520 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK3-ZHX2 STK3 chr8 99761504 - ZHX2 chr8 123963532 + Exonic hg19 LUAD TCGA-78-7153-01A 2 2 CDS-5'UTR Intra-chr q22.2 q24.13 Tumor suppressor gene Transcription factor Seq+ 73521 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK32C-PWWP2B STK32C chr10 134022538 - PWWP2B chr10 134230565 + Exonic hg19 SKCM TCGA-EB-A51B-01A 2 2 Out-of-frame Intra-chr q26.3 q26.3 73522 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK32C-PWWP2B STK32C chr10 134059404 - PWWP2B chr10 134230565 + Exonic hg19 SKCM TCGA-Z2-AA3V-06A 2 2 Out-of-frame Intra-chr q26.3 q26.3 73523 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK35-CHD6 STK35 chr20 2084011 - CHD6 chr20 40113247 - Exonic hg19 BRCA TCGA-EW-A1PF-01A 8 4 Out-of-frame Intra-chr p13 q12 Seq+ 73524 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK35-GP5 STK35 chr20 2098061 - GP5 chr3 194119013 - Exonic hg19 LIHC TCGA-ZS-A9CF-01A 7 2 3'UTR-5'UTR Inter-chr p13 q29 73525 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK35-GP5 STK35 chr20 2098061 - GP5 chr3 194119013 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 5 2 3'UTR-5'UTR Inter-chr p13 q29 73526 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK38-GMDS STK38 chr6 36467650 - GMDS chr6 1742820 - Exonic hg19 UCEC TCGA-A5-A7WK-01A 11 6 Out-of-frame Intra-chr p21.31 p25.3 Seq+ 73527 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK38-TDRD7 STK38 chr6 36507849 - TDRD7 chr9 100249454 + Exonic hg19 LIHC TCGA-BC-A10Y-01A 79 28 In-Frame Inter-chr p21.31 q22.33 Seq+ 73528 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK38L-CCDC91 STK38L chr12 27462130 - CCDC91 chr12 28603094 + Exonic hg19 STAD TCGA-IP-7968-01A 37 169 In-Frame Intra-chr p11.23 p11.22 Seq+ 73529 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK39-C9orf5 STK39 chr2 168931492 - C9orf5 chr9 111870850 - Exonic hg19 LGG TCGA-TQ-A7RM-01A 6 4 Out-of-frame Inter-chr q24.3 73530 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK39-ITGB6 STK39 chr2 168921829 - ITGB6 chr2 160994710 - Exonic hg19 BRCA TCGA-E2-A14Z-01A 2 4 In-Frame Intra-chr q24.3 q24.2 Seq+ 73531 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK39-MAT1A STK39 chr2 168931492 - MAT1A chr10 82045345 - Exonic hg19 BRCA TCGA-AN-A0AJ-01A 7 3 Out-of-frame Inter-chr q24.3 q22.3 Seq+ 73532 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK39-NCKAP5 STK39 chr2 168869144 - NCKAP5 chr2 133489624 - Exonic hg19 HNSC TCGA-CN-A49A-01A 18 14 In-Frame Intra-chr q24.3 q21.2 Seq+ 73533 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK39-PARVA STK39 chr2 169103738 - PARVA chr11 12495292 + Exonic hg19 HNSC TCGA-QK-A6IG-01A 2 3 In-Frame Inter-chr q24.3 p15.3 Seq+ 73534 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK39-SCN3A STK39 chr2 168986051 - SCN3A chr2 166012413 - Exonic hg19 LUAD TCGA-55-6968-01A 3 4 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 73535 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK39-SCN7A STK39 chr2 168869144 - SCN7A chr2 167334220 - Exonic hg19 MESO TCGA-UT-A88D-01B 3 3 CDS-5'UTR Intra-chr q24.3 q24.3 Seq+ 73536 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK4-TSHZ2 STK4 chr20 43615937 - TSHZ2 chr20 52103683 + Exonic hg19 BRCA TCGA-EW-A2FV-01A 15 13 CDS-3'UTR Intra-chr q13.12 q13.2 Transcription factor Seq+ 73537 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STK40-OSCP1 STK40 chr1 36851324 - OSCP1 chr1 36904511 - Exonic hg19 SARC TCGA-DX-A3LY-01B 7 5 5'UTR-CDS Intra-chr p34.3 p34.3 Tumor suppressor gene Seq+ 73538 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STOM-DDX27 STOM chr9 124101355 - DDX27 chr20 47849303 + Exonic hg19 BRCA TCGA-AR-A1AP-01A 2 1 3'UTR-CDS Inter-chr q33.2 q13.13 73539 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STON2-RPGRIP1 STON2 chr14 81837332 - RPGRIP1 chr14 21756098 + Exonic hg19 UCEC TCGA-5B-A90C-01A 7 12 CDS-5'UTR Intra-chr q31.1 q11.2 Seq+ 73540 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STON2-TJP2 STON2 chr14 81893446 - TJP2 chr9 71827464 + Exonic hg19 BRCA TCGA-BH-A1FE-01A 2 3 5'UTR-5'UTR Inter-chr q31.1 q21.11 Seq+ 73541 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STRA6-NDUFAF1 STRA6 chr15 74476197 - NDUFAF1 chr15 41679791 - Exonic hg19 UCS TCGA-N5-A59F-01A 11 8 Out-of-frame Intra-chr q24.1 q15.1 Seq+ 73542 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STRADA-GRB2 STRADA chr17 61790766 - GRB2 chr17 73328878 - Exonic hg19 ESCA TCGA-V5-A7RE-01A 3 27 In-Frame Intra-chr q23.3 Tumor suppressor gene q25.1 Seq+ 73543 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STRBP-ASTN2 STRBP chr9 125932181 - ASTN2 chr9 119414072 - Exonic hg19 LUAD TCGA-78-7536-01A 10 12 In-Frame Intra-chr q33.3 q33.1 Seq+ 73544 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STRBP-ATG14 STRBP chr9 125946411 - ATG14 chr14 55864152 - Exonic hg19 BRCA TCGA-BH-A1FM-01A 2 1 Out-of-frame Inter-chr q33.3 q22.3 73545 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STRBP-DENND1A STRBP chr9 126030715 - DENND1A chr9 126165769 - Exonic hg19 LUSC TCGA-43-7658-01A 3 9 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 73546 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STRBP-DENND1A STRBP chr9 126030715 - DENND1A chr9 126531842 - Exonic hg19 BRCA TCGA-A8-A07O-01A 12 20 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 73547 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STRBP-DENND1A STRBP chr9 126030715 - DENND1A chr9 126220176 - Exonic hg19 STAD TCGA-CD-8535-01A 9 4 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 73548 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STRBP-DENND1A STRBP chr9 126030715 - DENND1A chr9 126165769 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 2 12 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 73549 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STRBP-DENND1A STRBP chr9 126030715 - DENND1A chr9 126165769 - Exonic hg19 LUSC TCGA-NC-A5HL-01A 14 29 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 73550 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STRN-ALK STRN chr2 37143221 - ALK chr2 29446394 - Exonic hg19 THCA TCGA-DJ-A3US-01A 13 14 In-Frame Intra-chr p22.2 p23.1 TK:ALK Oncogene KB Pub Seq+ 73551 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STRN-ALK STRN chr2 37143221 - ALK chr2 29446394 - Exonic hg19 KIRP TCGA-G7-6792-01A 48 48 In-Frame Intra-chr p22.2 p23.1 TK:ALK Oncogene KB Pub Seq+ 73552 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STRN-HEATR5B STRN chr2 37096697 - HEATR5B chr2 37208937 - Exonic hg19 LUSC TCGA-94-8491-01A 16 6 Out-of-frame Intra-chr p22.2 p22.2 Seq+ 73553 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STRN-HEATR5B STRN chr2 37121041 - HEATR5B chr2 37293053 - Exonic hg19 BRCA TCGA-BH-A0BP-01A 4 1 In-Frame Intra-chr p22.2 p22.2 Seq+ 73554 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STRN-HEATR5B STRN chr2 37193373 - HEATR5B chr2 37195744 - Exonic hg19 CESC TCGA-HM-A6W2-01A 56 47 CDS-3'UTR Intra-chr p22.2 p22.2 Seq+ 73555 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STRN-HEATR5B STRN chr2 37193373 - HEATR5B chr2 37216002 - Exonic hg19 SARC TCGA-KD-A5QS-01A 14 17 In-Frame Intra-chr p22.2 p22.2 Seq+ 73556 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STRN-SULT6B1 STRN chr2 37126666 - SULT6B1 chr2 37415690 - Exonic hg19 LIHC TCGA-NI-A4U2-01A 2 3 CDS-5'UTR Intra-chr p22.2 p22.2 Seq+ 73557 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STRN3-COCH STRN3 chr14 31495110 - COCH chr14 31346778 + Exonic hg19 HNSC TCGA-C9-A480-01A 2 1 Out-of-frame Intra-chr q12 q12 73558 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STRN3-EGLN3 STRN3 chr14 31495110 - EGLN3 chr14 34400421 - Exonic hg19 LUAD TCGA-78-8660-01A 20 11 In-Frame Intra-chr q12 q13.1 Tumor suppressor gene Seq+ 73559 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STRN3-MAML3 STRN3 chr14 31495110 - MAML3 chr4 140651821 - Exonic hg19 LIHC TCGA-DD-A1EJ-01A 21 26 In-Frame Inter-chr q12 q31.1 Seq+ 73560 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STRN3-METTL3 STRN3 chr14 31404369 - METTL3 chr14 21972024 - Exonic hg19 KIRC TCGA-CJ-5677-01A 18 8 In-Frame Intra-chr q12 q11.2 Seq+ 73561 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STRN3-PPP6R3 STRN3 chr14 31495110 - PPP6R3 chr11 68350511 + Exonic hg19 BRCA TCGA-EW-A423-01A 6 5 In-Frame Inter-chr q12 q13.2 73562 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STRN3-PRKD1 STRN3 chr14 31495110 - PRKD1 chr14 30194880 - Exonic hg19 LUAD TCGA-44-3918-01A 2 4 In-Frame Intra-chr q12 q12 Seq+ 73563 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STRN3-RNASE10 STRN3 chr14 31495110 - RNASE10 chr14 20978626 + Exonic hg19 BLCA TCGA-DK-A3X2-01A 3 3 CDS-5'UTR Intra-chr q12 q11.2 73564 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STRN4-UBE2S STRN4 chr19 47233989 - UBE2S chr19 55918330 - Exonic hg19 STAD TCGA-HU-A4H2-01A 2 81 In-Frame Intra-chr q13.32 q13.42 Seq+ 73565 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STX12-TMEM222 STX12 chr1 28116142 - TMEM222 chr1 27657211 + Exonic hg19 LUSC TCGA-66-2758-01A 6 3 In-Frame Intra-chr p35.3 p36.11 Seq+ 73566 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STX12-USP48 STX12 chr1 28138779 - USP48 chr1 22079612 - Exonic hg19 SKCM TCGA-EB-A5SH-06A 4 1 Out-of-frame Intra-chr p35.3 p36.12 73567 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STX12-WDTC1 STX12 chr1 28146243 - WDTC1 chr1 27608730 + Exonic hg19 LUSC TCGA-85-8287-01A 16 4 In-Frame Intra-chr p35.3 p36.11 Seq+ 73568 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STX12-WDTC1 STX12 chr1 28099936 - WDTC1 chr1 27630112 + Exonic hg19 CESC TCGA-VS-A9V3-01A 3 1 In-Frame Intra-chr p35.3 p36.11 Seq+ 73569 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STX16-MYT1 STX16 chr20 57227143 - MYT1 chr20 62821416 + Exonic hg19 BRCA TCGA-AN-A0FV-01A 75 26 5'UTR-5'UTR Intra-chr q13.32 Other:WEE Transcription factor Seq+ 73570 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STX17-NR4A3 STX17 chr9 102677644 - NR4A3 chr9 102587941 + Exonic hg19 LUSC TCGA-77-8138-01A 4 1 CDS-5'UTR Intra-chr q31.1 q31.1 Tumor suppressor gene Transcription factor Seq+ 73571 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STX17-NR4A3 STX17 chr9 102691125 - NR4A3 chr9 102606931 + Exonic hg19 HNSC TCGA-BA-A4IH-01A 49 21 In-Frame Intra-chr q31.1 q31.1 Tumor suppressor gene Transcription factor Seq+ 73572 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STX3-MS4A15 STX3 chr11 59523108 - MS4A15 chr11 60535040 + Exonic hg19 PRAD TCGA-HC-7209-01A 98 84 CDS-5'UTR Intra-chr q12.1 q12.2 Seq+ 73573 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STX3-PLEKHA7 STX3 chr11 59523108 - PLEKHA7 chr11 16816261 - Exonic hg19 HNSC TCGA-MZ-A7D7-01A 2 2 Out-of-frame Intra-chr q12.1 p15.1 73574 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STX5-ASIP STX5 chr11 62591638 - ASIP chr20 32848171 + Exonic hg19 UCEC TCGA-EY-A2ON-01A 7 7 CDS-5'UTR Inter-chr q12.3 q11.22 Seq+ 73575 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STX5-TAF6L STX5 chr11 62591638 - TAF6L chr11 62543243 + Exonic hg19 SARC TCGA-DX-A6YS-01A 2 2 CDS-5'UTR Intra-chr q12.3 q12.3 Seq+ 73576 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STX5-WDR74 STX5 chr11 62599426 - WDR74 chr11 62607131 - Exonic hg19 LUSC TCGA-66-2742-01A 4 1 5'UTR-5'UTR Intra-chr q12.3 q12.3 Seq+ 73577 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STX5-WDR74 STX5 chr11 62598491 - WDR74 chr11 62607131 - Exonic hg19 LUAD TCGA-75-6214-01A 10 4 CDS-5'UTR Intra-chr q12.3 q12.3 Seq+ 73578 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STX5-WDR74 STX5 chr11 62599426 - WDR74 chr11 62607131 - Exonic hg19 KIRC TCGA-BP-4331-01A 27 35 5'UTR-5'UTR Intra-chr q12.3 q12.3 Seq+ 73579 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STX5-WDR74 STX5 chr11 62599426 - WDR74 chr11 62607131 - Exonic hg19 CESC TCGA-VS-A9U6-01A 9 1 5'UTR-5'UTR Intra-chr q12.3 q12.3 Seq+ 73580 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STX6-PRRC2C STX6 chr1 180971742 - PRRC2C chr1 171560726 + Exonic hg19 PRAD TCGA-EJ-5518-01A 43 42 In-Frame Intra-chr q25.3 q24.3 Seq+ 73581 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STX6-RP11-111M22.2 STX6 chr1 180953813 - RP11-111M22.2 chr11 76114704 + Exonic hg19 BRCA TCGA-A2-A0ST-01A 2 2 Out-of-frame Inter-chr q25.3 73582 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STX6-SMYD3 STX6 chr1 180991775 - SMYD3 chr1 246093239 - Exonic hg19 SARC TCGA-DX-A6Z0-01A 12 3 Out-of-frame Intra-chr q25.3 q44 Transcription factor 73583 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STX6-TNR STX6 chr1 180971742 - TNR chr1 175375913 - Exonic hg19 LUSC TCGA-34-A5IX-01A 4 4 CDS-5'UTR Intra-chr q25.3 q25.1 Seq+ 73584 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STX7-LMBRD1 STX7 chr6 132824585 - LMBRD1 chr6 70386433 - Exonic hg19 UVM TCGA-VD-A8KJ-01A 790 724 In-Frame Intra-chr q23.2 q13 Seq+ 73585 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STX8-HSD17B4 STX8 chr17 9395146 - HSD17B4 chr5 118792010 + Exonic hg19 BRCA TCGA-A7-A2KD-01A 19 15 In-Frame Inter-chr p13.1 q23.1 Seq+ 73586 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STX8-RTN1 STX8 chr17 9281869 - RTN1 chr14 60074210 - Exonic hg19 PAAD TCGA-3A-A9J0-01A 13 15 In-Frame Inter-chr p13.1 q23.1 Seq+ 73587 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STXBP1-CACNA2D2 STXBP1 chr9 130425632 - CACNA2D2 chr3 50418557 - Exonic hg19 UCEC TCGA-A5-A7WK-01A 8 7 Out-of-frame Inter-chr q34.11 p21.31 Seq+ 73588 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STXBP1-SOX13 STXBP1 chr9 130374719 - SOX13 chr1 204082043 + Exonic hg19 UCS TCGA-N8-A56S-01A 9 1 CDS-5'UTR Inter-chr q34.11 q32.1 Transcription factor 73589 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STXBP2-ARHGEF1 STXBP2 chr19 7707934 - ARHGEF1 chr19 42398280 + Exonic hg19 BRCA TCGA-AC-A2BK-01A 3 3 Out-of-frame Intra-chr p13.2 q13.2 73590 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STXBP2-TRIM4 STXBP2 chr19 7704693 - TRIM4 chr7 99490369 - Exonic hg19 LIHC TCGA-DD-A11C-01A 10 8 Out-of-frame Inter-chr p13.2 q22.1 Seq+ 73591 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STXBP4-MSI2 STXBP4 chr17 53150437 - MSI2 chr17 55693331 + Exonic hg19 BRCA TCGA-A8-A09I-01A 24 10 In-Frame Intra-chr q22 q22 Seq+ 73592 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STXBP4-PPM1D STXBP4 chr17 53124515 - PPM1D chr17 58700882 + Exonic hg19 BRCA TCGA-A8-A09I-01A 6 7 Out-of-frame Intra-chr q22 q23.2 Seq+ 73593 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STXBP5-SASH1 STXBP5 chr6 147560406 - SASH1 chr6 148789681 + Exonic hg19 SARC TCGA-QC-A6FX-01A 4 9 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene Seq+ 73594 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STXBP5-TNFRSF19 STXBP5 chr6 147660520 - TNFRSF19 chr13 24247511 + Exonic hg19 SARC TCGA-PC-A5DM-01A 12 6 Out-of-frame Inter-chr q24.3 q12.12 Seq+ 73595 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STXBP5L-EPHA3 STXBP5L chr3 121100379 - EPHA3 chr3 89444987 + Exonic hg19 KICH TCGA-KL-8341-01A 2 4 In-Frame Intra-chr q13.33 p11.1 Oncogene Tumor suppressor gene Seq+ 73596 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STXBP6-SLC44A4 STXBP6 chr14 25443871 - SLC44A4 chr6 31844859 - Exonic hg19 BLCA TCGA-KQ-A41Q-01A 5 9 In-Frame Inter-chr q12 Seq+ 73597 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STXBP6-TMEM189-UBE2V1 STXBP6 chr14 25443871 - TMEM189-UBE2V1 chr20 48760158 - Exonic hg19 UCEC TCGA-AX-A3GI-01A 3 2 Out-of-frame Inter-chr q12 q13.13 73598 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STXBP6-ZNF410 STXBP6 chr14 25443871 - ZNF410 chr14 74370663 + Exonic hg19 SARC TCGA-DX-A6YT-01A 18 24 In-Frame Intra-chr q12 q24.3 Transcription factor Seq+ 73599 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STYK1-GPR162 STYK1 chr12 10774475 - GPR162 chr12 6934649 + Exonic hg19 PAAD TCGA-3A-A9I9-01A 10 12 Out-of-frame Intra-chr p13.2 p13.31 Seq+ 73600 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq STYX-DAD1 STYX chr14 53226472 - DAD1 chr14 23034037 - Exonic hg19 SARC TCGA-DX-AB2O-01A 53 30 CDS-3'UTR Intra-chr q22.1 q11.2 Seq+ 73601 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUB1-ELMO1 SUB1 chr5 32585731 - ELMO1 chr7 37172839 - Exonic hg19 SKCM TCGA-EB-A44R-06A 25 69 5'UTR-CDS Inter-chr p13.3 p14.1 Seq+ 73602 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUCLA2-CASR SUCLA2 chr13 48611742 - CASR chr3 121972795 + Exonic hg19 BRCA TCGA-D8-A27V-01A 2 1 5'UTR-5'UTR Inter-chr q14.2 q13.33 73603 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUFU-ADK SUFU chr10 104309863 - ADK chr10 76468079 + Exonic hg19 HNSC TCGA-4P-AA8J-01A 32 26 In-Frame Intra-chr q24.32 Oncogene Tumor suppressor gene q22.2 Seq+ 73604 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUFU-CYP26A1 SUFU chr10 104377185 - CYP26A1 chr10 94835583 + Exonic hg19 PRAD TCGA-EJ-A7NN-01A 16 7 In-Frame Intra-chr q24.32 Oncogene Tumor suppressor gene q23.33 Seq+ 73605 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUFU-GBF1 SUFU chr10 104309863 - GBF1 chr10 104111013 + Exonic hg19 UCEC TCGA-B5-A3S1-01A 2 1 In-Frame Intra-chr q24.32 Oncogene Tumor suppressor gene q24.32 Seq+ 73606 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUFU-GBF1 SUFU chr10 104309863 - GBF1 chr10 104111013 + Exonic hg19 BRCA TCGA-E2-A15E-01A 6 14 In-Frame Intra-chr q24.32 Oncogene Tumor suppressor gene q24.32 Seq+ 73607 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUFU-GBF1 SUFU chr10 104309863 - GBF1 chr10 104111013 + Exonic hg19 BRCA TCGA-E2-A15E-06A 10 15 In-Frame Intra-chr q24.32 Oncogene Tumor suppressor gene q24.32 Seq+ 73608 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUFU-KCNH2 SUFU chr10 104309863 - KCNH2 chr7 150672029 - Exonic hg19 PRAD TCGA-G9-A9S4-01A 11 17 In-Frame Inter-chr q24.32 Oncogene Tumor suppressor gene q36.1 Seq+ 73609 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUFU-ZCCHC24 SUFU chr10 104309863 - ZCCHC24 chr10 81154196 - Exonic hg19 LGG TCGA-DU-7006-01A 16 5 Out-of-frame Intra-chr q24.32 Oncogene Tumor suppressor gene q22.3 Seq+ 73610 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUGP1-MEX3D SUGP1 chr19 19407798 - MEX3D chr19 1556922 - Exonic hg19 UCEC TCGA-AX-A3FX-01A 7 3 In-Frame Intra-chr p13.11 p13.3 Seq+ 73611 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUGP1-PEPD SUGP1 chr19 19427231 - PEPD chr19 33904549 - Exonic hg19 LIHC TCGA-UB-A7MA-01A 12 11 In-Frame Intra-chr p13.11 q13.11 Seq+ 73612 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUGP1-TMEM221 SUGP1 chr19 19407798 - TMEM221 chr19 17547736 - Exonic hg19 SARC TCGA-DX-A8BL-01A 4 2 In-Frame Intra-chr p13.11 p13.11 Seq+ 73613 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUGP2-MEF2B SUGP2 chr19 19114977 - MEF2B chr19 19297814 - Exonic hg19 BRCA TCGA-BH-A0DX-01A 19 22 CDS-5'UTR Intra-chr p13.11 p13.11 Transcription factor Seq+ 73614 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUGP2-MEF2B SUGP2 chr19 19135428 - MEF2B chr19 19261573 - Exonic hg19 CESC TCGA-UC-A7PD-01A 75 37 CDS-5'UTR Intra-chr p13.11 p13.11 Transcription factor Seq+ 73615 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUGT1P3-ELF1 SUGT1P3 chr13 41495755 - ELF1 chr13 41525572 - Exonic hg19 UCEC TCGA-DF-A2KN-01A 4 4 3'UTR-CDS Intra-chr q14.11 q14.11 Transcription factor Seq+ 73616 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SULF1-ANKS1A SULF1 chr8 70573147 - ANKS1A chr6 34977682 + Exonic hg19 LUAD TCGA-91-6829-01A 2 15 Out-of-frame Inter-chr q13.2 p21.31 73617 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SULF1-C8orf34 SULF1 chr8 70379185 - C8orf34 chr8 69728121 + Exonic hg19 BRCA TCGA-AC-A7VC-01A 2 3 5'UTR-CDS Intra-chr q13.2 q13.2 73618 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SULF2-BCAS1 SULF2 chr20 46305238 - BCAS1 chr20 52645511 - Exonic hg19 LIHC TCGA-CC-A8HS-01A 3 4 Out-of-frame Intra-chr q13.12 q13.2 Seq+ 73619 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SULF2-DEXI SULF2 chr20 46414087 - DEXI chr16 11023416 - Exonic hg19 STAD TCGA-RD-A8MW-01A 7 110 5'UTR-3'UTR Inter-chr q13.12 p13.13 Seq+ 73620 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SULF2-GAB2 SULF2 chr20 46385933 - GAB2 chr11 77991947 - Exonic hg19 BRCA TCGA-BH-A0HL-01A 54 30 Out-of-frame Inter-chr q13.12 q14.1 Seq+ 73621 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SULF2-PEX5L SULF2 chr20 46385933 - PEX5L chr3 179689453 - Exonic hg19 SARC TCGA-DX-A8BR-01A 5 1 Out-of-frame Inter-chr q13.12 q26.33 73622 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SULF2-TSHZ2 SULF2 chr20 46365447 - TSHZ2 chr20 52103683 + Exonic hg19 SARC TCGA-K1-A6RU-01A 11 2 CDS-3'UTR Intra-chr q13.12 q13.2 Transcription factor Seq+ 73623 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SULF2-WFDC3 SULF2 chr20 46365447 - WFDC3 chr20 44404241 - Exonic hg19 SARC TCGA-DX-AB2P-01A 37 12 In-Frame Intra-chr q13.12 q13.12 Seq+ 73624 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SULT1B1-CSN2 SULT1B1 chr4 70596219 - CSN2 chr4 70825797 - Exonic hg19 BRCA TCGA-JL-A3YW-01A 5 6 Out-of-frame Intra-chr q13.3 Tumor suppressor gene Seq+ 73625 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SULT4A1-TFIP11 SULT4A1 chr22 44258094 - TFIP11 chr22 26899759 - Exonic hg19 SKCM TCGA-FS-A4F4-06A 30 16 In-Frame Intra-chr q13.31 q12.1 Seq+ 73626 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUN1-ICA1 SUN1 chr7 893255 - ICA1 chr7 8275635 - Exonic hg19 LUSC TCGA-66-2770-01A 8 4 CDS-5'UTR Intra-chr p22.3 p21.3 Seq+ 73627 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUN2-GTPBP1 SUN2 chr22 39146230 - GTPBP1 chr22 39111912 + Exonic hg19 LGG TCGA-TQ-A7RH-01A 4 2 In-Frame Intra-chr q13.1 q13.1 73628 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUPT16H-CHD8 SUPT16H chr14 21852021 - CHD8 chr14 21878147 - Exonic hg19 HNSC TCGA-CQ-6222-01A 3 1 In-Frame Intra-chr q11.2 q11.2 73629 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUPT4H1-PSMD12 SUPT4H1 chr17 56428763 - PSMD12 chr17 65341973 - Exonic hg19 BRCA TCGA-AN-A0FW-01A 27 19 Out-of-frame Intra-chr q22 q24.2 Seq+ 73630 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUPT4H1-SEPT4 SUPT4H1 chr17 56429428 - SEPT4 chr17 56603674 - Exonic hg19 BRCA TCGA-BH-A0DX-01A 64 36 In-Frame Intra-chr q22 q22 Tumor suppressor gene Seq+ 73631 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUPT5H-ACVRL1 SUPT5H chr19 39967306 - ACVRL1 chr12 52306155 + Exonic hg19 LUSC TCGA-77-8007-01A 2 5 Out-of-frame Inter-chr q13.2 q13.13 Oncogene 73632 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUPT5H-ARHGEF19 SUPT5H chr19 39965358 - ARHGEF19 chr1 16525749 - Exonic hg19 UCEC TCGA-AJ-A3BD-01A 35 25 Out-of-frame Inter-chr q13.2 p36.13 Seq+ 73633 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUPT5H-NADSYN1 SUPT5H chr19 39950600 - NADSYN1 chr11 71174478 + Exonic hg19 LUAD TCGA-69-7764-01A 12 8 Out-of-frame Inter-chr q13.2 q13.4 Seq+ 73634 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUPT5H-PLEKHG2 SUPT5H chr19 39944161 - PLEKHG2 chr19 39915878 + Exonic hg19 UCEC TCGA-PG-A914-01A 3 2 Out-of-frame Intra-chr q13.2 q13.2 73635 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUPT5H-SAMD4B SUPT5H chr19 39950600 - SAMD4B chr19 39871630 + Exonic hg19 PAAD TCGA-IB-A7LX-01A 112 28 In-Frame Intra-chr q13.2 q13.2 Seq+ 73636 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUPT5H-SIPA1L3 SUPT5H chr19 39936605 - SIPA1L3 chr19 38643480 + Exonic hg19 BRCA TCGA-E9-A1RF-01A 131 100 Out-of-frame Intra-chr q13.2 q13.13 Seq+ 73637 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUPT6H-MRO SUPT6H chr17 27008422 - MRO chr18 48333220 - Exonic hg19 HNSC TCGA-CV-5966-01A 4 1 Out-of-frame Inter-chr q11.2 q21.2 73638 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUPT6H-UTP6 SUPT6H chr17 26989360 - UTP6 chr17 30202432 - Exonic hg19 BRCA TCGA-LL-A5YP-01A 3 2 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 73639 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUPT7L-RBKS SUPT7L chr2 27885046 - RBKS chr2 28004655 - Exonic hg19 KIRP TCGA-BQ-5889-01A 10 4 Out-of-frame Intra-chr p23.3 p23.2 Seq+ 73640 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUPT7L-RBKS SUPT7L chr2 27883851 - RBKS chr2 28004655 - Exonic hg19 HNSC TCGA-CV-7413-01A 6 4 Out-of-frame Intra-chr p23.3 p23.2 Seq+ 73641 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUPV3L1-DDX21 SUPV3L1 chr10 70968854 - DDX21 chr10 70723858 + Exonic hg19 COAD TCGA-A6-5665-01A 2 2 Out-of-frame Intra-chr q22.1 q22.1 73642 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUPV3L1-VPS26A SUPV3L1 chr10 70962799 - VPS26A chr10 70915568 + Exonic hg19 OV TCGA-36-1578-01A 7 12 In-Frame Intra-chr q22.1 q22.1 Seq+ 73643 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUSD1-UGCG SUSD1 chr9 114840818 - UGCG chr9 114676885 + Exonic hg19 BRCA TCGA-D8-A1XA-01A 65 21 Out-of-frame Intra-chr q32 q31.3 Seq+ 73644 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUSD4-DEGS1 SUSD4 chr1 223536620 - DEGS1 chr1 224377279 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 17 35 In-Frame Intra-chr q41 q42.11 Seq+ 73645 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUSD4-NVL SUSD4 chr1 223536620 - NVL chr1 224468887 - Exonic hg19 BRCA TCGA-AO-A12D-01A 15 7 Out-of-frame Intra-chr q41 q42.11 Seq+ 73646 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUSD4-RYR2 SUSD4 chr1 223536620 - RYR2 chr1 237664011 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 14 13 CDS-5'UTR Intra-chr q41 q43 Seq+ 73647 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUV420H1-C11orf24 SUV420H1 chr11 67980944 - C11orf24 chr11 68035719 - Exonic hg19 LIHC TCGA-DD-A1EK-01A 5 5 5'UTR-5'UTR Intra-chr q13.2 Seq+ 73648 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUV420H1-CPEB4 SUV420H1 chr11 67947599 - CPEB4 chr5 173359453 + Exonic hg19 SARC TCGA-3B-A9HR-01A 2 2 Out-of-frame Inter-chr q35.2 73649 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUV420H1-CPSF7 SUV420H1 chr11 67947599 - CPSF7 chr11 61172176 - Exonic hg19 LIHC TCGA-CC-5264-01A 21 3 CDS-3'UTR Intra-chr q12.2 Seq+ 73650 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUV420H1-MTL5 SUV420H1 chr11 67980605 - MTL5 chr11 68480875 - Exonic hg19 LUAD TCGA-38-4630-01A 35 52 5'UTR-CDS Intra-chr Seq+ 73651 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUV420H1-MYO1D SUV420H1 chr11 67947599 - MYO1D chr17 30965853 - Exonic hg19 BLCA TCGA-DK-A1AC-01A 31 14 Out-of-frame Inter-chr q11.2 Seq+ 73652 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUV420H1-RNPS1 SUV420H1 chr11 67980944 - RNPS1 chr16 2305727 - Exonic hg19 ESCA TCGA-L5-A8NI-01A 15 115 5'UTR-CDS Inter-chr p13.3 Seq+ 73653 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUV420H1-SLITRK4 SUV420H1 chr11 67980944 - SLITRK4 chrX 142718974 - Exonic hg19 LUSC TCGA-66-2766-01A 3 1 5'UTR-5'UTR Inter-chr q27.3 73654 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUV420H1-STXBP1 SUV420H1 chr11 67980944 - STXBP1 chr9 130413882 + Exonic hg19 READ TCGA-AG-3731-01A 14 29 5'UTR-CDS Inter-chr q34.11 73655 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUV420H1-SUPT5H SUV420H1 chr11 67980944 - SUPT5H chr19 39955438 + Exonic hg19 BRCA TCGA-UL-AAZ6-01A 5 15 5'UTR-CDS Inter-chr q13.2 73656 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUZ12-AC135724.1 SUZ12 chr17 30293215 - AC135724.1 chr17 29708891 + Exonic hg19 PRAD TCGA-EJ-8472-01A 5 3 Out-of-frame Intra-chr q11.2 Tumor suppressor gene 73657 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUZ12-ADAP2 SUZ12 chr17 30267505 - ADAP2 chr17 29271925 + Exonic hg19 UCS TCGA-N8-A4PQ-01A 3 3 Out-of-frame Intra-chr q11.2 Tumor suppressor gene q11.2 73658 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUZ12-NF1 SUZ12 chr17 30303633 - NF1 chr17 29576002 + Exonic hg19 UCEC TCGA-BK-A139-01A 2 13 In-Frame Intra-chr q11.2 Tumor suppressor gene q11.2 Oncogene Tumor suppressor gene Seq+ 73659 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SUZ12-VANGL1 SUZ12 chr17 30323896 - VANGL1 chr1 116202262 + Exonic hg19 SKCM TCGA-D3-A5GU-06A 4 1 In-Frame Inter-chr q11.2 Tumor suppressor gene p13.1 Seq+ 73660 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SVEP1-TJP2 SVEP1 chr9 113275206 - TJP2 chr9 71864291 + Exonic hg19 SARC TCGA-K1-A6RU-01A 30 19 Out-of-frame Intra-chr q31.3 q21.11 Seq+ 73661 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SVIL-KIAA1217 SVIL chr10 29975482 - KIAA1217 chr10 24508555 + Exonic hg19 SARC TCGA-HS-A5N9-01A 3 2 5'UTR-5'UTR Intra-chr p11.23 p12.2 Seq+ 73662 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SVIL-RFC5 SVIL chr10 30024680 - RFC5 chr12 118456877 + Exonic hg19 PRAD TCGA-CH-5791-01A 2 1 5'UTR-5'UTR Inter-chr p11.23 q24.23 73663 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SVIL-STAM SVIL chr10 29923349 - STAM chr10 17702463 + Exonic hg19 SARC TCGA-DX-A8BU-01A 7 3 5'UTR-5'UTR Intra-chr p11.23 p12.33 Seq+ 73664 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SWAP70-WEE1 SWAP70 chr11 9685825 - WEE1 chr11 9597435 + Exonic hg19 LUAD TCGA-05-4427-01A 55 17 In-Frame Intra-chr p15.4 p15.4 Seq+ 73665 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SWAP70-WEE1 SWAP70 chr11 9715833 - WEE1 chr11 9603079 + Exonic hg19 HNSC TCGA-DQ-5630-01A 5 3 Out-of-frame Intra-chr p15.4 p15.4 Seq+ 73666 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SWAP70-ZNF143 SWAP70 chr11 9685825 - ZNF143 chr11 9522638 + Exonic hg19 LUAD TCGA-73-4666-01A 14 4 Out-of-frame Intra-chr p15.4 p15.4 Transcription factor Seq+ 73667 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SWAP70-ZNF143 SWAP70 chr11 9754257 - ZNF143 chr11 9516193 + Exonic hg19 LGG TCGA-HT-8104-01A 31 10 In-Frame Intra-chr p15.4 p15.4 Transcription factor Seq+ 73668 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SWI5-RINT1 SWI5 chr9 131048312 - RINT1 chr7 105207566 + Exonic hg19 OV TCGA-13-0797-01A 4 12 Out-of-frame Inter-chr q34.11 q22.3 Tumor suppressor gene Seq+ 73669 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SWT1-DCAF8 SWT1 chr1 185159774 - DCAF8 chr1 160195453 - Exonic hg19 BLCA TCGA-4Z-AA7R-01A 24 5 In-Frame Intra-chr q25.3 q23.2 Seq+ 73670 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SWT1-GLT25D2 SWT1 chr1 185200840 - GLT25D2 chr1 183947654 - Exonic hg19 SARC TCGA-DX-A48N-01A 22 7 In-Frame Intra-chr q25.3 73671 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYCP2-ZMYND8 SYCP2 chr20 58467045 - ZMYND8 chr20 45927616 - Exonic hg19 BRCA TCGA-A2-A0CT-01A 7 2 In-Frame Intra-chr q13.33 q13.12 Seq+ 73672 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYDE2-TCTN1 SYDE2 chr1 85665935 - TCTN1 chr12 111057641 + Exonic hg19 SARC TCGA-DX-A23V-01A 4 5 In-Frame Inter-chr p22.3 q24.11 Seq+ 73673 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYF2-RHD SYF2 chr1 25558595 - RHD chr1 25611064 + Exonic hg19 LIHC TCGA-FV-A3R3-01A 10 2 Out-of-frame Intra-chr p36.11 p36.11 Seq+ 73674 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYF2-USP48 SYF2 chr1 25553933 - USP48 chr1 22084276 - Exonic hg19 STAD TCGA-BR-4201-01A 9 19 In-Frame Intra-chr p36.11 p36.12 Seq+ 73675 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYK-AUH SYK chr9 93564175 - AUH chr9 94060358 - Exonic hg19 LIHC TCGA-G3-A25X-01A 6 1 5'UTR-CDS Intra-chr q22.2 TK:Syk Oncogene Tumor suppressor gene q22.31 73676 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYMPK-DYRK1B SYMPK chr19 46366316 - DYRK1B chr19 40322608 - Exonic hg19 UCEC TCGA-PG-A915-01A 39 22 5'UTR-5'UTR Intra-chr q13.32 CMGC:DYRK Seq+ 73677 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYMPK-ELSPBP1 SYMPK chr19 46321217 - ELSPBP1 chr19 48511908 + Exonic hg19 LGG TCGA-DU-8166-01A 2 2 CDS-5'UTR Intra-chr q13.32 q13.33 Seq+ 73678 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYMPK-LSM4 SYMPK chr19 46366316 - LSM4 chr19 18426875 - Exonic hg19 LGG TCGA-E1-A7YH-01A 2 3 5'UTR-CDS Intra-chr q13.32 p13.11 Seq+ 73679 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYMPK-ZNF573 SYMPK chr19 46330768 - ZNF573 chr19 38231095 - Exonic hg19 LUSC TCGA-66-2759-01A 19 19 Out-of-frame Intra-chr q13.32 q13.13 Transcription factor Seq+ 73680 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYN1-ATAD1 SYN1 chrX 47431303 - ATAD1 chr10 89552512 - Exonic hg19 LGG TCGA-CS-6669-01A 2 4 3'UTR-CDS Inter-chr p11.23 73681 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNCRIP-CDK19 SYNCRIP chr6 86352515 - CDK19 chr6 111067404 - Exonic hg19 BRCA TCGA-E2-A14V-01A 129 78 5'UTR-CDS Intra-chr q14.3 q21 Seq+ 73682 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNE1-CACNA1C SYNE1 chr6 152614723 - CACNA1C chr12 2778099 + Exonic hg19 BRCA TCGA-C8-A1HJ-01A 2 5 In-Frame Inter-chr q25.2 Oncogene p13.33 Seq+ 73683 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNE1-ESR1 SYNE1 chr6 152565672 - ESR1 chr6 152415520 + Exonic hg19 SARC TCGA-HB-A3YV-01A 17 7 Out-of-frame Intra-chr q25.2 Oncogene q25.1 Oncogene Tumor suppressor gene Transcription factor Seq+ 73684 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNE1-RGS17 SYNE1 chr6 152621776 - RGS17 chr6 153332897 - Exonic hg19 BRCA TCGA-BH-A1FD-01A 2 2 In-Frame Intra-chr q25.2 Oncogene q25.2 Seq+ 73685 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNE2-ACTN1 SYNE2 chr14 64319861 - ACTN1 chr14 69378959 - Exonic hg19 LUAD TCGA-86-8358-01A 12 8 5'UTR-5'UTR Intra-chr q23.2 q24.1 Seq+ 73686 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNE2-ATG2B SYNE2 chr14 64498075 - ATG2B chr14 96761897 - Exonic hg19 BLCA TCGA-XF-AAMW-01A 9 4 In-Frame Intra-chr q23.2 q32.2 Seq+ 73687 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNE2-CATSPERB SYNE2 chr14 64434564 - CATSPERB chr14 92105594 - Exonic hg19 BRCA TCGA-C8-A26Z-01A 2 1 Out-of-frame Intra-chr q23.2 73688 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNE2-DMRTA1 SYNE2 chr14 64634357 - DMRTA1 chr9 22451063 + Exonic hg19 BRCA TCGA-A8-A08Z-01A 2 6 Out-of-frame Inter-chr q23.2 p21.3 Transcription factor Seq+ 73689 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNE2-GEMIN2 SYNE2 chr14 64319861 - GEMIN2 chr14 39584033 + Exonic hg19 ESCA TCGA-LN-A5U6-01A 5 18 5'UTR-CDS Intra-chr q23.2 q21.1 Seq+ 73690 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNE2-ITPK1 SYNE2 chr14 64486811 - ITPK1 chr14 93460342 - Exonic hg19 HNSC TCGA-CQ-6229-01A 30 10 In-Frame Intra-chr q23.2 Seq+ 73691 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNE2-KIAA0391 SYNE2 chr14 64453335 - KIAA0391 chr14 35735933 + Exonic hg19 BRCA TCGA-A8-A079-01A 293 117 In-Frame Intra-chr q23.2 q13.2 Seq+ 73692 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNE2-RTN1 SYNE2 chr14 64434564 - RTN1 chr14 60213199 - Exonic hg19 BRCA TCGA-A7-A6VV-01A 4 4 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 73693 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNGAP1-COL11A2 SYNGAP1 chr6 33393680 - COL11A2 chr6 33133983 - Exonic hg19 PAAD TCGA-IB-AAUN-01A 2 6 Out-of-frame Intra-chr Seq+ 73694 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNGR2-MSI2 SYNGR2 chr17 76167135 - MSI2 chr17 55478740 + Exonic hg19 LUSC TCGA-66-2783-01A 98 74 Out-of-frame Intra-chr q25.3 q22 Seq+ 73695 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNJ1-C21orf62 SYNJ1 chr21 34037223 - C21orf62 chr21 34182964 - Exonic hg19 BRCA TCGA-E2-A158-01A 2 1 CDS-5'UTR Intra-chr q22.11 73696 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNJ1-PDE9A SYNJ1 chr21 34099083 - PDE9A chr21 44163886 + Exonic hg19 LGG TCGA-HT-7603-01A 12 7 In-Frame Intra-chr q22.11 q22.3 Seq+ 73697 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNJ2-CDK19 SYNJ2 chr6 158487667 - CDK19 chr6 111067404 - Exonic hg19 BRCA TCGA-E9-A248-01A 3 6 Out-of-frame Intra-chr q25.3 q21 Seq+ 73698 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNJ2-KIF25 SYNJ2 chr6 158403120 - KIF25 chr6 168439233 + Exonic hg19 PRAD TCGA-ZG-A8QZ-01A 7 9 Out-of-frame Intra-chr q25.3 q27 Seq+ 73699 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNJ2-SCN11A SYNJ2 chr6 158483196 - SCN11A chr3 38962746 - Exonic hg19 BLCA TCGA-XF-AAMG-01A 6 2 Out-of-frame Inter-chr q25.3 p22.2 73700 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNJ2-ZDHHC14 SYNJ2 chr6 158403120 - ZDHHC14 chr6 157963617 + Exonic hg19 BRCA TCGA-E9-A248-01A 25 44 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 73701 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNPO2-METTL14 SYNPO2 chr4 119810296 - METTL14 chr4 119621705 + Exonic hg19 PCPG TCGA-QR-A707-01A 2 5 In-Frame Intra-chr q26 Tumor suppressor gene q26 Seq+ 73702 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNRG-AATF SYNRG chr17 35969327 - AATF chr17 35378233 + Exonic hg19 MESO TCGA-3U-A98I-01A 2 1 In-Frame Intra-chr 73703 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNRG-CCR7 SYNRG chr17 35921297 - CCR7 chr17 38715194 - Exonic hg19 BRCA TCGA-BH-A0BZ-01A 9 3 In-Frame Intra-chr q21.2 Seq+ 73704 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNRG-FBXO47 SYNRG chr17 35969327 - FBXO47 chr17 37107942 - Exonic hg19 PRAD TCGA-KK-A5A1-01A 2 2 Out-of-frame Intra-chr q12 73705 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNRG-KRT33A SYNRG chr17 35936439 - KRT33A chr17 39505680 - Exonic hg19 LUAD TCGA-55-1592-01A 16 1 Out-of-frame Intra-chr Seq+ 73706 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNRG-PIK3R5 SYNRG chr17 35939228 - PIK3R5 chr17 8809054 - Exonic hg19 CHOL TCGA-W5-AA31-01A 10 8 CDS-5'UTR Intra-chr p13.1 Seq+ 73707 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNRG-ROBO1 SYNRG chr17 35956270 - ROBO1 chr3 78988077 - Exonic hg19 LUSC TCGA-43-A475-01A 2 2 Out-of-frame Inter-chr p12.3 Tumor suppressor gene 73708 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYNRG-SHC2 SYNRG chr17 35945433 - SHC2 chr19 425231 - Exonic hg19 BLCA TCGA-XF-A8HC-01A 14 8 Out-of-frame Inter-chr p13.3 Seq+ 73709 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYPL1-AKR1D1 SYPL1 chr7 105738136 - AKR1D1 chr7 137782612 + Exonic hg19 LUAD TCGA-05-4398-01A 71 68 In-Frame Intra-chr q22.3 q33 Seq+ 73710 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYPL1-TMEM168 SYPL1 chr7 105738136 - TMEM168 chr7 112407799 - Exonic hg19 LUSC TCGA-39-5011-01A 206 125 Out-of-frame Intra-chr q22.3 q31.1 Seq+ 73711 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYS1-IDO2 SYS1 chr20 43994326 - IDO2 chr8 39872766 + Exonic hg19 BLCA TCGA-2F-A9KP-01A 89 49 Out-of-frame Inter-chr q13.12 p11.21 Seq+ 73712 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYT1-ACSS3 SYT1 chr12 79441142 - ACSS3 chr12 81593120 + Exonic hg19 BRCA TCGA-D8-A1XY-01A 3 7 5'UTR-CDS Intra-chr q21.2 q21.31 Seq+ 73713 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYT1-EPYC SYT1 chr12 79441142 - EPYC chr12 91396355 - Exonic hg19 SARC TCGA-SG-A6Z7-01A 133 105 5'UTR-5'UTR Intra-chr q21.2 q21.33 Seq+ 73714 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYT1-PHKB SYT1 chr12 79258889 - PHKB chr16 47722952 + Exonic hg19 SARC TCGA-DX-A23R-01A 42 25 5'UTR-CDS Inter-chr q21.2 q12.1 Seq+ 73715 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYT1-PPFIA2 SYT1 chr12 79441142 - PPFIA2 chr12 81851645 - Exonic hg19 SARC TCGA-HB-A3YV-01A 9 20 5'UTR-CDS Intra-chr q21.2 q21.31 Seq+ 73716 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYT1-RIC8B SYT1 chr12 79441142 - RIC8B chr12 107208474 + Exonic hg19 BRCA TCGA-A2-A0T7-01A 2 1 5'UTR-CDS Intra-chr q21.2 q23.3 73717 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYT1-TBK1 SYT1 chr12 79441142 - TBK1 chr12 64889263 + Exonic hg19 SARC TCGA-DX-AB35-01A 8 10 5'UTR-CDS Intra-chr q21.2 q14.2 Other:IKK 73718 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYT14-HSD11B1 SYT14 chr1 210126101 - HSD11B1 chr1 209905781 + Exonic hg19 SKCM TCGA-BF-AAP1-01A 4 2 In-Frame Intra-chr q32.2 q32.2 73719 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYT2-KDM5B SYT2 chr1 202679386 - KDM5B chr1 202701067 - Exonic hg19 PCPG TCGA-TT-A6YJ-01A 22 13 5'UTR-CDS Intra-chr q32.1 q32.1 Transcription factor Seq+ 73720 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYT7-FADS3 SYT7 chr11 61318856 - FADS3 chr11 61646319 - Exonic hg19 CHOL TCGA-YR-A95A-01A 6 12 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 73721 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYT7-PACS1 SYT7 chr11 61313503 - PACS1 chr11 65960957 + Exonic hg19 BRCA TCGA-BH-A201-01A 4 3 In-Frame Intra-chr q12.2 q13.1 73722 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYT7-RNF214 SYT7 chr11 61300461 - RNF214 chr11 117150624 + Exonic hg19 UCS TCGA-NF-A4WX-01A 6 2 Out-of-frame Intra-chr q12.2 q23.3 73723 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYT7-SDHAF2 SYT7 chr11 61290547 - SDHAF2 chr11 61213413 + Exonic hg19 CESC TCGA-MY-A5BF-01A 67 36 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 73724 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYTL2-CHRM1 SYTL2 chr11 85411558 - CHRM1 chr11 62678650 - Exonic hg19 BRCA TCGA-BH-A201-01A 250 119 CDS-5'UTR Intra-chr q14.1 q12.3 Seq+ 73725 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYTL2-DOK5 SYTL2 chr11 85521997 - DOK5 chr20 53226927 + Exonic hg19 LUAD TCGA-38-4632-01A 28 23 5'UTR-CDS Inter-chr q14.1 q13.2 Seq+ 73726 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYTL2-TMEM135 SYTL2 chr11 85468668 - TMEM135 chr11 87006824 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 49 41 In-Frame Intra-chr q14.1 q14.2 Seq+ 73727 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SYTL3-SNX9 SYTL3 chr6 159134910 - SNX9 chr6 158342563 + Exonic hg19 UCEC TCGA-EY-A3QX-01A 4 7 In-Frame Intra-chr q25.3 q25.3 Seq+ 73728 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq SZT2-EIF2B3 SZT2 chr1 43898110 - EIF2B3 chr1 45446849 - Exonic hg19 LUAD TCGA-44-7660-01A 3 3 CDS-5'UTR Intra-chr p34.2 p34.1 Seq+ 73729 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAB1-C22orf42 TAB1 chr22 39824188 - C22orf42 chr22 32550305 - Exonic hg19 UCS TCGA-NA-A4QY-01A 3 3 Out-of-frame Intra-chr q13.1 q12.3 73730 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAB1-PHF21B TAB1 chr22 39813854 - PHF21B chr22 45281818 - Exonic hg19 SKCM TCGA-ER-A19C-06A 21 18 Out-of-frame Intra-chr q13.1 q13.31 Seq+ 73731 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAB2-C6orf162 TAB2 chr6 149663969 - C6orf162 chr6 88046727 + Exonic hg19 PRAD TCGA-VP-A875-01A 2 2 5'UTR-5'UTR Intra-chr q25.1 73732 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAB2-KCNU1 TAB2 chr6 149663969 - KCNU1 chr8 36721922 + Exonic hg19 SARC TCGA-DX-AB2O-01A 5 3 5'UTR-CDS Inter-chr q25.1 p11.23 Seq+ 73733 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAB2-PAX7 TAB2 chr6 149639151 - PAX7 chr1 19062126 + Exonic hg19 SARC TCGA-DX-AB2O-01A 4 7 5'UTR-CDS Inter-chr q25.1 p36.13 Oncogene Transcription factor Seq+ 73734 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAB2-UST TAB2 chr6 149700654 - UST chr6 149394969 + Exonic hg19 BLCA TCGA-XF-A9SP-01A 2 2 In-Frame Intra-chr q25.1 q25.1 Seq+ 73735 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAB3-DMD TAB3 chrX 30877604 - DMD chrX 31241238 - Exonic hg19 BRCA TCGA-B6-A0IJ-01A 11 7 Out-of-frame Intra-chr p21.2 p21.1 Tumor suppressor gene Seq+ 73736 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAB3-DMD TAB3 chrX 30870895 - DMD chrX 31366751 - Exonic hg19 SARC TCGA-X6-A7WA-01A 2 1 In-Frame Intra-chr p21.2 p21.1 Tumor suppressor gene Seq+ 73737 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TACC1-ANKS1A TACC1 chr8 38710546 - ANKS1A chr6 34977682 + Exonic hg19 LUAD TCGA-44-7670-01A 2 11 Out-of-frame Inter-chr p11.22 p21.31 73738 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TACC1-MYBPC1 TACC1 chr8 38646337 - MYBPC1 chr12 102008274 + Exonic hg19 SARC TCGA-DX-A3LS-01A 3 3 In-Frame Inter-chr p11.22 q23.2 73739 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TACC2-ATE1 TACC2 chr10 123892249 - ATE1 chr10 123629553 - Exonic hg19 BRCA TCGA-A8-A07C-01A 12 6 Out-of-frame Intra-chr q26.13 q26.13 Seq+ 73740 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TACC2-HS1BP3 TACC2 chr10 123892249 - HS1BP3 chr2 20838412 - Exonic hg19 LUAD TCGA-05-4420-01A 82 68 Out-of-frame Inter-chr q26.13 p24.1 Seq+ 73741 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TACC2-MICU1 TACC2 chr10 123749003 - MICU1 chr10 74135630 - Exonic hg19 BRCA TCGA-A2-A0CL-01A 5 6 5'UTR-CDS Intra-chr q26.13 q22.1 Seq+ 73742 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TACC2-PPAPDC1A TACC2 chr10 123903221 - PPAPDC1A chr10 122263330 + Exonic hg19 STAD TCGA-BR-8590-01A 6 12 In-Frame Intra-chr q26.13 Seq+ 73743 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TACC2-PPAPDC1A TACC2 chr10 123903221 - PPAPDC1A chr10 122263330 + Exonic hg19 STAD TCGA-BR-8686-01A 2 2 In-Frame Intra-chr q26.13 Seq+ 73744 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TACC2-PPAPDC1A TACC2 chr10 123848106 - PPAPDC1A chr10 122348815 + Exonic hg19 ESCA TCGA-R6-A6Y0-01B 2 4 Out-of-frame Intra-chr q26.13 Seq+ 73745 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TACC2-ZNF365 TACC2 chr10 123903221 - ZNF365 chr10 64219500 + Exonic hg19 STAD TCGA-BR-8368-01A 4 18 Out-of-frame Intra-chr q26.13 q21.2 Transcription factor Seq+ 73746 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TACC3-TMEM129 TACC3 chr4 1739429 - TMEM129 chr4 1720353 - Exonic hg19 SKCM TCGA-D3-A8GR-06A 2 1 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 73747 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TADA1-CADM3 TADA1 chr1 166838682 - CADM3 chr1 159169541 + Exonic hg19 LUAD TCGA-05-4432-01A 114 100 In-Frame Intra-chr q24.1 q23.2 Tumor suppressor gene Seq+ 73748 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TADA2A-C17orf78 TADA2A chr17 35767040 - C17orf78 chr17 35734817 + Exonic hg19 UVM TCGA-V4-A9EW-01A 3 11 5'UTR-CDS Intra-chr q12 Seq+ 73749 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TADA2A-GDPD4 TADA2A chr17 35827629 - GDPD4 chr11 76938961 - Exonic hg19 BRCA TCGA-A1-A0SM-01A 3 2 Out-of-frame Inter-chr q12 q13.5 73750 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TADA2A-MED24 TADA2A chr17 35818689 - MED24 chr17 38192407 - Exonic hg19 BRCA TCGA-AR-A0TQ-01A 101 91 Out-of-frame Intra-chr q12 q21.1 Seq+ 73751 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TADA2A-MYO1D TADA2A chr17 35804870 - MYO1D chr17 30821933 - Exonic hg19 BRCA TCGA-D8-A1J9-01A 20 19 Out-of-frame Intra-chr q12 q11.2 Seq+ 73752 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TADA2A-NLK TADA2A chr17 35787108 - NLK chr17 26449629 + Exonic hg19 BRCA TCGA-AN-A049-01A 6 1 Out-of-frame Intra-chr q12 q11.2 CMGC:MAPK Seq+ 73753 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TADA2A-NT5C3L TADA2A chr17 35830636 - NT5C3L chr17 39988729 - Exonic hg19 STAD TCGA-BR-8483-01A 5 12 Out-of-frame Intra-chr q12 Seq+ 73754 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF1-ITGB1BP2 TAF1 chrX 70588020 - ITGB1BP2 chrX 70523477 + Exonic hg19 CESC TCGA-EK-A2PI-01A 5 4 Out-of-frame Intra-chr q13.1 Atypical:TAF1 Oncogene q13.1 Seq+ 73755 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF12-ATAD3C TAF12 chr1 28969504 - ATAD3C chr1 1403764 + Exonic hg19 PAAD TCGA-Q3-AA2A-01A 12 8 5'UTR-CDS Intra-chr p35.3 p36.33 Seq+ 73756 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF12-RAB6A TAF12 chr1 28939759 - RAB6A chr11 73390765 - Exonic hg19 UCEC TCGA-B5-A5OD-01A 3 3 Out-of-frame Inter-chr p35.3 q13.4 73757 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF12-TPRG1 TAF12 chr1 28944465 - TPRG1 chr3 189028175 + Exonic hg19 LUSC TCGA-98-A53A-01A 20 23 Out-of-frame Inter-chr p35.3 q28 Seq+ 73758 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF13-LYPLA1 TAF13 chr1 109617609 - LYPLA1 chr8 54967693 - Exonic hg19 SARC TCGA-3B-A9HS-01A 2 1 In-Frame Inter-chr p13.3 q11.23 Seq+ 73759 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF13-SORT1 TAF13 chr1 109618543 - SORT1 chr1 109867711 - Exonic hg19 STAD TCGA-BR-4357-01A 7 14 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 73760 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF15-AP2B1 TAF15 chr17 34151202 - AP2B1 chr17 33966614 + Exonic hg19 BRCA TCGA-AN-A049-01A 49 58 In-Frame Intra-chr q12 q12 Seq+ 73761 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF15-MAN1A2 TAF15 chr17 34169463 - MAN1A2 chr1 118035769 + Exonic hg19 BRCA TCGA-C8-A12L-01A 19 12 In-Frame Inter-chr q12 p12 Seq+ 73762 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF1A-SLC12A7 TAF1A chr1 222757470 - SLC12A7 chr5 1085588 - Exonic hg19 HNSC TCGA-DQ-7589-01A 2 1 In-Frame Inter-chr q41 p15.33 Seq+ 73763 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF1B-FOSL2 TAF1B chr2 9985447 - FOSL2 chr2 28626974 + Exonic hg19 BRCA TCGA-EW-A6SC-01A 4 7 In-Frame Intra-chr p25.1 p23.2 Transcription factor 73764 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF1B-SGCZ TAF1B chr2 9985447 - SGCZ chr8 14412435 - Exonic hg19 MESO TCGA-TS-A8AY-01A 2 2 In-Frame Inter-chr p25.1 p22 Seq+ 73765 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF2-ALDH16A1 TAF2 chr8 120843917 - ALDH16A1 chr19 49967111 + Exonic hg19 BRCA TCGA-AC-A5XU-01A 51 16 In-Frame Inter-chr q24.12 q13.33 Seq+ 73766 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF2-CLVS1 TAF2 chr8 120843917 - CLVS1 chr8 62412014 + Exonic hg19 SARC TCGA-IE-A6BZ-01A 52 16 Out-of-frame Intra-chr q24.12 q12.2 Seq+ 73767 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF2-DSCC1 TAF2 chr8 120814034 - DSCC1 chr8 120859320 - Exonic hg19 BRCA TCGA-AO-A124-01A 221 75 In-Frame Intra-chr q24.12 q24.12 Seq+ 73768 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF2-DSCC1 TAF2 chr8 120814034 - DSCC1 chr8 120850647 - Exonic hg19 LIHC TCGA-BC-A10R-01A 7 4 In-Frame Intra-chr q24.12 q24.12 Seq+ 73769 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF3-APP TAF3 chr10 8019286 - APP chr21 27394358 - Exonic hg19 BLCA TCGA-4Z-AA87-01A 7 4 In-Frame Inter-chr p14 q21.3 73770 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF3-ATP5C1 TAF3 chr10 7866523 - ATP5C1 chr10 7839010 + Exonic hg19 LUAD TCGA-53-7624-01A 40 26 In-Frame Intra-chr p14 p14 Seq+ 73771 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF3-ATP5C1 TAF3 chr10 7866523 - ATP5C1 chr10 7840953 + Exonic hg19 STAD TCGA-IN-A6RI-01A 21 104 In-Frame Intra-chr p14 p14 Seq+ 73772 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF3-DNAJC1 TAF3 chr10 7860838 - DNAJC1 chr10 22095028 - Exonic hg19 LUAD TCGA-05-4420-01A 5 29 Out-of-frame Intra-chr p14 p12.31 Seq+ 73773 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF3-SVIL TAF3 chr10 7866523 - SVIL chr10 29858241 - Exonic hg19 SKCM TCGA-FW-A3TV-06A 11 21 CDS-5'UTR Intra-chr p14 p11.23 Seq+ 73774 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF3-ZDHHC14 TAF3 chr10 7866523 - ZDHHC14 chr6 157963617 + Exonic hg19 THCA TCGA-CE-A13K-01A 11 5 Out-of-frame Inter-chr p14 q25.3 Seq+ 73775 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF3-ZNF365 TAF3 chr10 7866523 - ZNF365 chr10 64135940 + Exonic hg19 PRAD TCGA-G9-6356-01A 2 1 CDS-5'UTR Intra-chr p14 q21.2 Transcription factor 73776 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF4-B4GALT5 TAF4 chr20 60575180 - B4GALT5 chr20 48273239 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 3 2 Out-of-frame Intra-chr q13.13 73777 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF4-CDH4 TAF4 chr20 60639507 - CDH4 chr20 59829882 + Exonic hg19 BRCA TCGA-A7-A13F-01A 6 2 Out-of-frame Intra-chr q13.33 Tumor suppressor gene 73778 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF4-FAF1 TAF4 chr20 60587871 - FAF1 chr1 51050483 - Exonic hg19 BRCA TCGA-E9-A1R7-01A 26 12 In-Frame Inter-chr p32.3 Seq+ 73779 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF4-GATA5 TAF4 chr20 60639507 - GATA5 chr20 61040977 - Exonic hg19 BRCA TCGA-A7-A13D-01A 8 3 Out-of-frame Intra-chr q13.33 Tumor suppressor gene Transcription factor Seq+ 73780 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF4-GTPBP5 TAF4 chr20 60572606 - GTPBP5 chr20 60770858 + Exonic hg19 READ TCGA-CI-6621-01A 2 4 In-Frame Intra-chr 73781 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF4-LAMA5 TAF4 chr20 60639507 - LAMA5 chr20 60913206 - Exonic hg19 BRCA TCGA-A7-A13D-01A 2 1 In-Frame Intra-chr q13.33 Seq+ 73782 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF4-LAMA5 TAF4 chr20 60639507 - LAMA5 chr20 60885367 - Exonic hg19 BLCA TCGA-GV-A3QF-01A 75 49 In-Frame Intra-chr q13.33 Seq+ 73783 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF4-LARGE TAF4 chr20 60585102 - LARGE chr22 34252790 - Exonic hg19 BRCA TCGA-BH-A0H7-01A 11 3 CDS-5'UTR Inter-chr Seq+ 73784 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF4-STX16 TAF4 chr20 60572606 - STX16 chr20 57242546 + Exonic hg19 HNSC TCGA-BB-7866-01A 24 12 In-Frame Intra-chr q13.32 Seq+ 73785 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF4-TCFL5 TAF4 chr20 60572606 - TCFL5 chr20 61490878 - Exonic hg19 BRCA TCGA-AR-A1AH-01A 39 32 In-Frame Intra-chr q13.33 Transcription factor Seq+ 73786 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF4-TSHZ2 TAF4 chr20 60572606 - TSHZ2 chr20 52103683 + Exonic hg19 LUAD TCGA-50-5072-01A 5 3 CDS-3'UTR Intra-chr q13.2 Transcription factor Seq+ 73787 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF4-TSHZ2 TAF4 chr20 60572606 - TSHZ2 chr20 52103683 + Exonic hg19 LUAD TCGA-91-6831-01A 26 24 CDS-3'UTR Intra-chr q13.2 Transcription factor Seq+ 73788 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF4B-CHST9 TAF4B chr18 23807240 - CHST9 chr18 24628467 - Exonic hg19 BRCA TCGA-A2-A0YM-01A 6 7 In-Frame Intra-chr q11.2 q11.2 Seq+ 73789 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF6L-GLYATL1 TAF6L chr11 62538962 - GLYATL1 chr11 58722243 + Exonic hg19 BRCA TCGA-A8-A08F-01A 11 9 5'UTR-CDS Intra-chr q12.3 q12.1 Seq+ 73790 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF6L-PCYT1A TAF6L chr11 62538962 - PCYT1A chr3 195969511 - Exonic hg19 ACC TCGA-OR-A5JM-01A 14 14 5'UTR-CDS Inter-chr q12.3 q29 Seq+ 73791 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF6L-SCGB1A1 TAF6L chr11 62543942 - SCGB1A1 chr11 62189693 + Exonic hg19 STAD TCGA-VQ-A8DV-01A 28 229 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 73792 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF6L-TMEM109 TAF6L chr11 62550297 - TMEM109 chr11 60688358 + Exonic hg19 BRCA TCGA-E2-A9RU-01A 13 11 In-Frame Intra-chr q12.3 q12.2 Seq+ 73793 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF8-COL5A3 TAF8 chr6 42044977 - COL5A3 chr19 10116907 - Exonic hg19 LGG TCGA-TM-A7CF-01A 4 2 Out-of-frame Inter-chr p21.1 p13.2 Seq+ 73794 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF8-COL5A3 TAF8 chr6 42044977 - COL5A3 chr19 10116907 - Exonic hg19 LGG TCGA-TM-A7CF-02A 3 3 Out-of-frame Inter-chr p21.1 p13.2 Seq+ 73795 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF8-CRISP1 TAF8 chr6 42036345 - CRISP1 chr6 49819842 - Exonic hg19 LUAD TCGA-91-6840-01A 47 38 In-Frame Intra-chr p21.1 p12.3 Seq+ 73796 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF8-GRIP1 TAF8 chr6 42036345 - GRIP1 chr12 66990707 - Exonic hg19 SKCM TCGA-D3-A1Q1-06A 2 1 Out-of-frame Inter-chr p21.1 q14.3 73797 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF8-SLC22A16 TAF8 chr6 42023752 - SLC22A16 chr6 110763978 - Exonic hg19 LUSC TCGA-43-A475-01A 298 159 Out-of-frame Intra-chr p21.1 q21 Seq+ 73798 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAF9-ADAMTS6 TAF9 chr5 68662330 - ADAMTS6 chr5 64625310 - Exonic hg19 LUAD TCGA-44-6147-01A 2 3 In-Frame Intra-chr q12.3 Seq+ 73799 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAGLN-RFWD2 TAGLN chr11 117075503 - RFWD2 chr1 176129420 - Exonic hg19 SARC TCGA-K1-A3PN-01A 2 1 Out-of-frame Inter-chr q23.3 Tumor suppressor gene q25.2 Tumor suppressor gene 73800 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAGLN-VPS24 TAGLN chr11 117075257 - VPS24 chr2 86948245 - Exonic hg19 SARC TCGA-DX-A6BB-01A 2 1 Out-of-frame Inter-chr q23.3 Tumor suppressor gene 73801 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TALDO1-CLCN3 TALDO1 chr11 765012 - CLCN3 chr4 170623929 + Exonic hg19 BLCA TCGA-FD-A3SM-01A 2 12 Out-of-frame Inter-chr p15.5 q33 73802 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TALDO1-EPS8L2 TALDO1 chr11 747578 - EPS8L2 chr11 720062 + Exonic hg19 CESC TCGA-C5-A1MQ-01A 3 2 Out-of-frame Intra-chr p15.5 p15.5 Seq+ 73803 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TALDO1-EPS8L2 TALDO1 chr11 760253 - EPS8L2 chr11 720062 + Exonic hg19 LIHC TCGA-UB-A7MA-01A 18 9 Out-of-frame Intra-chr p15.5 p15.5 Seq+ 73804 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TALDO1-ZNFX1 TALDO1 chr11 765012 - ZNFX1 chr20 47863418 - Exonic hg19 LUAD TCGA-44-7671-01A 2 8 Out-of-frame Inter-chr p15.5 q13.13 73805 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAMM41-ATG7 TAMM41 chr3 11871188 - ATG7 chr3 11389351 + Exonic hg19 CESC TCGA-VS-A9U6-01A 2 1 Out-of-frame Intra-chr p25.2 p25.3 Seq+ 73806 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANC1-NR4A2 TANC1 chr2 159857701 - NR4A2 chr2 157187303 - Exonic hg19 LUAD TCGA-78-7536-01A 2 2 5'UTR-5'UTR Intra-chr q24.2 q24.1 Transcription factor Seq+ 73807 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANC1-PKP4 TANC1 chr2 159825294 - PKP4 chr2 159530189 + Exonic hg19 OV TCGA-04-1365-01A 35 12 5'UTR-CDS Intra-chr q24.2 q24.1 Seq+ 73808 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANC1-PKP4 TANC1 chr2 159954346 - PKP4 chr2 159459582 + Exonic hg19 BRCA TCGA-D8-A1XK-01A 50 49 Out-of-frame Intra-chr q24.2 q24.1 Seq+ 73809 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANC1-PKP4 TANC1 chr2 160007067 - PKP4 chr2 159389692 + Exonic hg19 BLCA TCGA-FD-A6TK-01A 4 1 CDS-5'UTR Intra-chr q24.2 q24.1 Seq+ 73810 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANC2-ANKFN1 TANC2 chr17 61466905 - ANKFN1 chr17 54517688 + Exonic hg19 BRCA TCGA-A8-A076-01A 2 4 Out-of-frame Intra-chr q23.2 q22 Seq+ 73811 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANC2-ARHGEF12 TANC2 chr17 61151375 - ARHGEF12 chr11 120317112 + Exonic hg19 SARC TCGA-FX-A2QS-01A 11 5 In-Frame Inter-chr q23.2 q23.3 Tumor suppressor gene Seq+ 73812 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANC2-C17orf63 TANC2 chr17 61151375 - C17orf63 chr17 27093725 - Exonic hg19 BRCA TCGA-GI-A2C8-01A 14 3 Out-of-frame Intra-chr q23.2 73813 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANC2-CHD6 TANC2 chr17 61086987 - CHD6 chr20 40086068 - Exonic hg19 BRCA TCGA-A1-A0SJ-01A 32 53 Out-of-frame Inter-chr q23.2 q12 Seq+ 73814 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANC2-CRB3 TANC2 chr17 61345234 - CRB3 chr19 6465556 + Exonic hg19 LUAD TCGA-50-5946-01A 107 54 In-Frame Inter-chr q23.2 p13.3 Seq+ 73815 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANC2-CRB3 TANC2 chr17 61345234 - CRB3 chr19 6465556 + Exonic hg19 LUAD TCGA-50-5946-02A 94 28 In-Frame Inter-chr q23.2 p13.3 Seq+ 73816 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANC2-EFCAB3 TANC2 chr17 61278318 - EFCAB3 chr17 60451175 + Exonic hg19 BRCA TCGA-D8-A1JK-01A 10 13 In-Frame Intra-chr q23.2 q23.2 Seq+ 73817 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANC2-GOSR1 TANC2 chr17 61315438 - GOSR1 chr17 28846957 + Exonic hg19 BRCA TCGA-A2-A0T1-01A 8 4 Out-of-frame Intra-chr q23.2 q11.2 Seq+ 73818 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANC2-KRT10 TANC2 chr17 61345234 - KRT10 chr17 38974734 - Exonic hg19 BRCA TCGA-AC-A3QQ-01A 3 7 Out-of-frame Intra-chr q23.2 q21.2 Seq+ 73819 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANC2-LRRC37B TANC2 chr17 61151375 - LRRC37B chr17 30351730 + Exonic hg19 BRCA TCGA-BH-A18R-01A 2 2 Out-of-frame Intra-chr q23.2 q11.2 73820 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANC2-MED13 TANC2 chr17 61396451 - MED13 chr17 60112969 - Exonic hg19 BRCA TCGA-UL-AAZ6-01A 2 1 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 73821 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANC2-MRC2 TANC2 chr17 61086987 - MRC2 chr17 60741909 + Exonic hg19 LIHC TCGA-ED-A7PX-01A 5 4 In-Frame Intra-chr q23.2 q23.2 Seq+ 73822 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANC2-PHB TANC2 chr17 61086987 - PHB chr17 47490653 - Exonic hg19 BRCA TCGA-D8-A27N-01A 66 101 CDS-5'UTR Intra-chr q23.2 q21.33 Tumor suppressor gene Seq+ 73823 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANC2-PRKCA TANC2 chr17 61151375 - PRKCA chr17 64683229 + Exonic hg19 LUSC TCGA-43-2581-01A 12 8 In-Frame Intra-chr q23.2 q24.2 Seq+ 73824 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANC2-SPAG9 TANC2 chr17 61086987 - SPAG9 chr17 49157065 - Exonic hg19 LUAD TCGA-83-5908-01A 38 26 Out-of-frame Intra-chr q23.2 q21.33 Seq+ 73825 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANC2-SSH2 TANC2 chr17 61086987 - SSH2 chr17 28004759 - Exonic hg19 BRCA TCGA-C8-A275-01A 6 14 Out-of-frame Intra-chr q23.2 q11.2 Seq+ 73826 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANC2-STRADA TANC2 chr17 61086987 - STRADA chr17 61805773 - Exonic hg19 BRCA TCGA-A1-A0SN-01A 106 89 CDS-5'UTR Intra-chr q23.2 q23.3 Tumor suppressor gene Seq+ 73827 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANC2-TMEM104 TANC2 chr17 61151375 - TMEM104 chr17 72781621 + Exonic hg19 LGG TCGA-FG-A87Q-01A 2 2 Out-of-frame Intra-chr q23.2 q25.1 Seq+ 73828 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANC2-ZNF468 TANC2 chr17 61278318 - ZNF468 chr19 53352466 - Exonic hg19 SARC TCGA-FX-A2QS-01A 2 4 Out-of-frame Inter-chr q23.2 q13.41 Transcription factor 73829 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANK-CACNB4 TANK chr2 162016997 - CACNB4 chr2 152739884 - Exonic hg19 SARC TCGA-X6-A8C2-01A 2 4 5'UTR-CDS Intra-chr q24.2 Tumor suppressor gene q23.3 Seq+ 73830 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANK-MARCH7 TANK chr2 162061304 - 2019_ 3_ 7_ chr2 160623795 + Exonic hg19 PAAD TCGA-F2-6879-01A 8 6 Out-of-frame Intra-chr q24.2 Tumor suppressor gene q24.2 Seq+ 73831 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANK-MNAT1 TANK chr2 162036272 - MNAT1 chr14 61434947 + Exonic hg19 LUSC TCGA-56-6545-01A 181 72 Out-of-frame Inter-chr q24.2 Tumor suppressor gene q23.1 Seq+ 73832 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TANK-SLC38A6 TANK chr2 162036272 - SLC38A6 chr14 61449226 + Exonic hg19 LUSC TCGA-56-6545-01A 8 11 In-Frame Inter-chr q24.2 Tumor suppressor gene q23.1 Seq+ 73833 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAOK1-ABHD15 TAOK1 chr17 27829741 - ABHD15 chr17 27890104 - Exonic hg19 PRAD TCGA-G9-6363-01A 9 6 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 73834 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAOK1-ACER3 TAOK1 chr17 27825539 - ACER3 chr11 76687333 + Exonic hg19 BRCA TCGA-A1-A0SM-01A 14 18 In-Frame Inter-chr q11.2 q13.5 Seq+ 73835 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAOK1-ASGR2 TAOK1 chr17 27835150 - ASGR2 chr17 7018130 - Exonic hg19 SKCM TCGA-EE-A2MR-06A 15 2 CDS-5'UTR Intra-chr q11.2 p13.1 73836 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAOK1-BCAS3 TAOK1 chr17 27838010 - BCAS3 chr17 58885365 + Exonic hg19 LUAD TCGA-91-6847-01A 17 8 Out-of-frame Intra-chr q11.2 q23.2 Seq+ 73837 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAOK1-C17orf105 TAOK1 chr17 27838010 - C17orf105 chr17 41861751 + Exonic hg19 LGG TCGA-TQ-A7RJ-01A 39 21 CDS-3'UTR Intra-chr q11.2 q21.31 Seq+ 73838 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAOK1-C17orf63 TAOK1 chr17 27718042 - C17orf63 chr17 27093725 - Exonic hg19 BRCA TCGA-E9-A22D-01A 3 5 Out-of-frame Intra-chr q11.2 73839 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAOK1-CCL2 TAOK1 chr17 27857637 - CCL2 chr17 32583241 + Exonic hg19 BRCA TCGA-BH-A0DZ-01A 5 1 Out-of-frame Intra-chr q11.2 q12 Seq+ 73840 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAOK1-CPD TAOK1 chr17 27718042 - CPD chr17 28747859 + Exonic hg19 UCEC TCGA-EY-A2OQ-01A 26 26 5'UTR-CDS Intra-chr q11.2 q11.2 Tumor suppressor gene Seq+ 73841 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAOK1-FLOT2 TAOK1 chr17 27718042 - FLOT2 chr17 27216044 - Exonic hg19 BRCA TCGA-E9-A228-01A 29 15 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 73842 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAOK1-NCOR1 TAOK1 chr17 27838010 - NCOR1 chr17 15984041 - Exonic hg19 CHOL TCGA-W5-AA31-01A 39 17 In-Frame Intra-chr q11.2 p11.2 Oncogene Seq+ 73843 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAOK1-NF1 TAOK1 chr17 27829741 - NF1 chr17 29652838 + Exonic hg19 LUSC TCGA-77-8148-01A 2 1 Out-of-frame Intra-chr q11.2 q11.2 Oncogene Tumor suppressor gene 73844 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAOK1-PARP10 TAOK1 chr17 27818883 - PARP10 chr8 145060606 - Exonic hg19 BRCA TCGA-D8-A1XZ-01A 4 3 Out-of-frame Inter-chr q11.2 q24.3 Seq+ 73845 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAOK1-PIPOX TAOK1 chr17 27794234 - PIPOX chr17 27371877 + Exonic hg19 BRCA TCGA-BH-A18G-01A 3 2 In-Frame Intra-chr q11.2 q11.2 Seq+ 73846 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAOK1-PROCA1 TAOK1 chr17 27718042 - PROCA1 chr17 27031861 - Exonic hg19 STAD TCGA-BR-A4QI-01A 4 32 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 73847 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAOK1-RARA TAOK1 chr17 27718042 - RARA chr17 38504568 + Exonic hg19 GBM TCGA-06-0141-01A 2 8 5'UTR-CDS Intra-chr q11.2 q21.2 Oncogene Transcription factor Seq+ 73848 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAOK1-RB1CC1 TAOK1 chr17 27809306 - RB1CC1 chr8 53555372 - Exonic hg19 BLCA TCGA-DK-A1AC-01A 60 53 Out-of-frame Inter-chr q11.2 q11.23 Tumor suppressor gene Seq+ 73849 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAOK1-TMEM97 TAOK1 chr17 27718042 - TMEM97 chr17 26652529 + Exonic hg19 LGG TCGA-DB-A75P-01A 2 1 5'UTR-CDS Intra-chr q11.2 q11.2 73850 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAOK1-VMP1 TAOK1 chr17 27844674 - VMP1 chr17 57842332 + Exonic hg19 COAD TCGA-AZ-4323-01A 58 37 In-Frame Intra-chr q11.2 q23.1 Seq+ 73851 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAOK1-ZNF385C TAOK1 chr17 27778698 - ZNF385C chr17 40186353 - Exonic hg19 LUAD TCGA-44-2659-01A 4 3 In-Frame Intra-chr q11.2 q21.2 Transcription factor Seq+ 73852 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAOK3-AGTPBP1 TAOK3 chr12 118810453 - AGTPBP1 chr9 88327481 - Exonic hg19 PRAD TCGA-CH-5794-01A 3 2 5'UTR-5'UTR Inter-chr q24.23 q21.33 Seq+ 73853 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAOK3-SUDS3 TAOK3 chr12 118810453 - SUDS3 chr12 118823919 + Exonic hg19 CESC TCGA-DS-A0VM-01A 6 12 5'UTR-CDS Intra-chr q24.23 q24.23 Seq+ 73854 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAP2-VARS TAP2 chr6 32797177 - VARS chr6 31760897 - Exonic hg19 LGG TCGA-FG-5963-01A 2 2 In-Frame Intra-chr 73855 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAPBP-DAXX TAPBP chr6 33271732 - DAXX chr6 33291807 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 7 8 CDS-5'UTR Intra-chr Oncogene Seq+ 73856 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAPT1-LDB2 TAPT1 chr4 16227882 - LDB2 chr4 16597498 - Exonic hg19 BLCA TCGA-DK-A3IN-01A 8 6 In-Frame Intra-chr p15.32 p15.32 Seq+ 73857 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TARBP1-ARID4B TARBP1 chr1 234553830 - ARID4B chr1 235341228 - Exonic hg19 PAAD TCGA-LB-A7SX-01A 3 3 Out-of-frame Intra-chr q42.2 q42.3 Seq+ 73858 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TARBP1-BTBD7 TARBP1 chr1 234529108 - BTBD7 chr14 93762503 - Exonic hg19 LUAD TCGA-69-7980-01A 6 3 CDS-5'UTR Inter-chr q42.2 Seq+ 73859 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TARBP1-CACHD1 TARBP1 chr1 234593413 - CACHD1 chr1 65047839 + Exonic hg19 STAD TCGA-BR-4366-01A 4 8 In-Frame Intra-chr q42.2 p31.3 73860 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TARBP1-IRF2BP2 TARBP1 chr1 234569156 - IRF2BP2 chr1 234743598 - Exonic hg19 LIHC TCGA-DD-AADF-01A 7 4 Out-of-frame Intra-chr q42.2 q42.3 73861 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TARBP1-RBM34 TARBP1 chr1 234561419 - RBM34 chr1 235311762 - Exonic hg19 BRCA TCGA-AC-A2BM-01A 54 22 In-Frame Intra-chr q42.2 q42.3 Seq+ 73862 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TARBP1-RBM34 TARBP1 chr1 234582549 - RBM34 chr1 235295312 - Exonic hg19 BRCA TCGA-D8-A27H-01A 60 21 Out-of-frame Intra-chr q42.2 q42.3 Seq+ 73863 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TARS2-VPS45 TARS2 chr1 150464965 - VPS45 chr1 150116887 + Exonic hg19 LUSC TCGA-85-6560-01A 81 45 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 73864 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TASP1-DHCR7 TASP1 chr20 13415691 - DHCR7 chr11 71152486 - Exonic hg19 CESC TCGA-C5-A1MK-01A 12 6 In-Frame Inter-chr p12.1 q13.4 Seq+ 73865 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TASP1-ESF1 TASP1 chr20 13610581 - ESF1 chr20 13714489 - Exonic hg19 PRAD TCGA-VP-A87D-01A 16 13 In-Frame Intra-chr p12.1 p12.1 Seq+ 73866 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TASP1-HLCS TASP1 chr20 13539655 - HLCS chr21 38334470 - Exonic hg19 BRCA TCGA-AR-A1AU-01A 8 2 CDS-5'UTR Inter-chr p12.1 q22.13 Seq+ 73867 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TASP1-MACROD2 TASP1 chr20 13567897 - MACROD2 chr20 14665489 + Exonic hg19 PRAD TCGA-KK-A7AU-01A 3 2 In-Frame Intra-chr p12.1 p12.1 Seq+ 73868 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TASP1-RALGAPA2 TASP1 chr20 13604093 - RALGAPA2 chr20 20634231 - Exonic hg19 LUSC TCGA-96-7544-01A 3 3 In-Frame Intra-chr p12.1 p11.23 73869 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TASP1-SEL1L2 TASP1 chr20 13550154 - SEL1L2 chr20 13912417 - Exonic hg19 PRAD TCGA-XQ-A8TA-01A 3 3 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 73870 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TASP1-SLC24A3 TASP1 chr20 13398095 - SLC24A3 chr20 19646508 + Exonic hg19 LUAD TCGA-97-7937-01A 2 4 In-Frame Intra-chr p12.1 p11.23 Seq+ 73871 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TATDN1-OC90 TATDN1 chr8 125527987 - OC90 chr8 133058130 - Exonic hg19 BRCA TCGA-D8-A1JP-01A 7 6 Out-of-frame Intra-chr q24.13 q24.22 Seq+ 73872 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TATDN2-FANCD2 TATDN2 chr3 10291298 - FANCD2 chr3 10142872 + Exonic hg19 ESCA TCGA-L5-A4OQ-01A 23 46 In-Frame Intra-chr p25.3 p25.3 Oncogene Seq+ 73873 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TATDN2-IRAK2 TATDN2 chr3 10312699 - IRAK2 chr3 10280432 + Exonic hg19 SKCM TCGA-EE-A2GR-06A 19 11 In-Frame Intra-chr p25.3 p25.3 TKL:IRAK Seq+ 73874 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TATDN2-SETD5 TATDN2 chr3 10312699 - SETD5 chr3 9506109 + Exonic hg19 KIRC TCGA-B0-5081-01A 3 1 Out-of-frame Intra-chr p25.3 p25.3 73875 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAX1BP1-BRAF TAX1BP1 chr7 27827222 - BRAF chr7 140481493 - Exonic hg19 SKCM TCGA-D3-A2JC-06A 15 22 In-Frame Intra-chr p15.2 q34 TKL:RAF Oncogene Seq+ 73876 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAX1BP1-CHN2 TAX1BP1 chr7 27827222 - CHN2 chr7 29394241 + Exonic hg19 ESCA TCGA-JY-A6FH-01A 7 62 Out-of-frame Intra-chr p15.2 p14.3 Seq+ 73877 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAX1BP1-GPX4 TAX1BP1 chr7 27779888 - GPX4 chr19 1105185 + Exonic hg19 UCEC TCGA-AX-A3G4-01A 35 16 5'UTR-CDS Inter-chr p15.2 p13.3 Seq+ 73878 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAX1BP1-JAZF1 TAX1BP1 chr7 27797752 - JAZF1 chr7 28031600 - Exonic hg19 OV TCGA-24-1424-01A 5 8 In-Frame Intra-chr p15.2 p15.1 Transcription factor Seq+ 73879 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAX1BP1-KCTD7 TAX1BP1 chr7 27809453 - KCTD7 chr7 66260498 + Exonic hg19 MESO TCGA-TS-A8AY-01A 31 6 Out-of-frame Intra-chr p15.2 q11.21 Seq+ 73880 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAX1BP3-C17orf85 TAX1BP3 chr17 3571782 - C17orf85 chr17 3719564 - Exonic hg19 LUSC TCGA-66-2795-01A 44 15 Out-of-frame Intra-chr p13.2 Seq+ 73881 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TAX1BP3-PMP22 TAX1BP3 chr17 3567973 - PMP22 chr17 15134397 - Exonic hg19 OV TCGA-24-1431-01A 14 10 Out-of-frame Intra-chr p13.2 p12 Seq+ 73882 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D1-LIMCH1 TBC1D1 chr4 37892969 - LIMCH1 chr4 41652410 + Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 17 7 5'UTR-CDS Intra-chr p14 p13 Seq+ 73883 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D1-PGM2 TBC1D1 chr4 37904133 - PGM2 chr4 37831586 + Exonic hg19 ESCA TCGA-R6-A8W5-01B 2 12 In-Frame Intra-chr p14 p14 Seq+ 73884 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D1-RAB28 TBC1D1 chr4 38055959 - RAB28 chr4 13481150 - Exonic hg19 LUSC TCGA-43-6143-01A 3 3 Out-of-frame Intra-chr p14 p15.33 Seq+ 73885 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D10A-ANK1 TBC1D10A chr22 30700520 - ANK1 chr8 41591587 - Exonic hg19 UCEC TCGA-PG-A914-01A 20 16 In-Frame Inter-chr q12.2 p11.21 Seq+ 73886 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D10A-POLR3H TBC1D10A chr22 30695433 - POLR3H chr22 41936799 - Exonic hg19 HNSC TCGA-CX-7086-01A 17 6 In-Frame Intra-chr q12.2 q13.2 Seq+ 73887 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D12-EXOC6 TBC1D12 chr10 96271411 - EXOC6 chr10 94653106 + Exonic hg19 LUSC TCGA-37-5819-01A 2 2 Out-of-frame Intra-chr q23.33 q23.33 Seq+ 73888 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D12-MORN4 TBC1D12 chr10 96234540 - MORN4 chr10 99379440 - Exonic hg19 BRCA TCGA-AN-A0XN-01A 3 4 CDS-5'UTR Intra-chr q23.33 q24.2 Seq+ 73889 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D13-ODF2 TBC1D13 chr9 131559493 - ODF2 chr9 131245095 + Exonic hg19 BRCA TCGA-LL-A9Q3-01A 16 16 In-Frame Intra-chr q34.11 q34.11 Seq+ 73890 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D14-EVC TBC1D14 chr4 6989076 - EVC chr4 5785279 + Exonic hg19 SARC TCGA-DX-AB2O-01A 46 45 In-Frame Intra-chr p16.1 p16.2 Seq+ 73891 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D14-EVC TBC1D14 chr4 6925838 - EVC chr4 5803677 + Exonic hg19 BRCA TCGA-EW-A3U0-01A 3 4 Out-of-frame Intra-chr p16.1 p16.2 Seq+ 73892 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D14-HTRA3 TBC1D14 chr4 6996029 - HTRA3 chr4 8288288 + Exonic hg19 GBM TCGA-28-5204-01A 32 58 In-Frame Intra-chr p16.1 p16.1 Tumor suppressor gene Seq+ 73893 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D14-HTRA3 TBC1D14 chr4 6925838 - HTRA3 chr4 8284164 + Exonic hg19 BLCA TCGA-DK-A3IS-01A 7 10 Out-of-frame Intra-chr p16.1 p16.1 Tumor suppressor gene Seq+ 73894 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D14-KIAA0232 TBC1D14 chr4 6925838 - KIAA0232 chr4 6873301 + Exonic hg19 KIRC TCGA-CZ-4866-01A 5 9 Out-of-frame Intra-chr p16.1 p16.1 Seq+ 73895 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D15-BMPER TBC1D15 chr12 72266783 - BMPER chr7 33976901 + Exonic hg19 LGG TCGA-DU-A5TY-01A 168 68 In-Frame Inter-chr q21.1 p14.3 Seq+ 73896 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D15-CNOT2 TBC1D15 chr12 72290560 - CNOT2 chr12 70731169 + Exonic hg19 SARC TCGA-DX-A6BG-01A 5 5 Out-of-frame Intra-chr q21.1 q15 Seq+ 73897 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D15-CPSF6 TBC1D15 chr12 72312328 - CPSF6 chr12 69663292 + Exonic hg19 BLCA TCGA-ZF-AA4U-01A 8 8 CDS-3'UTR Intra-chr q21.1 q15 Seq+ 73898 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D15-PTPRR TBC1D15 chr12 72266783 - PTPRR chr12 71286757 - Exonic hg19 ESCA TCGA-L5-A8NF-01A 3 22 Out-of-frame Intra-chr q21.1 q15 Seq+ 73899 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D15-RP11-419C5.2 TBC1D15 chr12 72291721 - RP11-419C5.2 chr16 70012185 - Exonic hg19 BLCA TCGA-FD-A3B3-01A 2 143 Out-of-frame Inter-chr q21.1 73900 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D15-SLC16A7 TBC1D15 chr12 72266783 - SLC16A7 chr12 60165000 + Exonic hg19 SARC TCGA-DX-A1L0-01A 44 26 Out-of-frame Intra-chr q21.1 q14.1 Seq+ 73901 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D16-GOSR2 TBC1D16 chr17 77983959 - GOSR2 chr17 45006886 + Exonic hg19 READ TCGA-AF-A56L-01A 31 1 In-Frame Intra-chr q25.3 q21.32 Seq+ 73902 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D16-KIF3A TBC1D16 chr17 77913821 - KIF3A chr5 132035266 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 2 2 Out-of-frame Inter-chr q25.3 q31.1 73903 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D16-ZFP106 TBC1D16 chr17 78009594 - ZFP106 chr15 42716258 - Exonic hg19 KIRP TCGA-F9-A7Q0-01A 14 5 5'UTR-CDS Inter-chr q25.3 73904 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D17-PRR12 TBC1D17 chr19 50390830 - PRR12 chr19 50117790 + Exonic hg19 CESC TCGA-C5-A7X3-01A 5 2 In-Frame Intra-chr q13.33 q13.33 Transcription factor Seq+ 73905 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D19-ANAPC4 TBC1D19 chr4 26641809 - ANAPC4 chr4 25381996 + Exonic hg19 HNSC TCGA-HD-7753-01A 7 1 In-Frame Intra-chr p15.2 p15.2 73906 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D22A-AP3D1 TBC1D22A chr22 47433094 - AP3D1 chr19 2102267 - Exonic hg19 UCS TCGA-NA-A4R1-01A 35 8 In-Frame Inter-chr q13.31 p13.3 Seq+ 73907 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D22A-ARFGAP3 TBC1D22A chr22 47158745 - ARFGAP3 chr22 43195166 - Exonic hg19 SKCM TCGA-EE-A2ME-06A 13 4 Out-of-frame Intra-chr q13.31 q13.2 Seq+ 73908 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D22A-BACH2 TBC1D22A chr22 47158745 - BACH2 chr6 90718575 - Exonic hg19 SKCM TCGA-BF-A5EQ-01A 2 4 CDS-5'UTR Inter-chr q13.31 q15 Transcription factor 73909 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D22A-FBLN1 TBC1D22A chr22 47193517 - FBLN1 chr22 45946372 + Exonic hg19 LUSC TCGA-85-A50M-01A 22 25 In-Frame Intra-chr q13.31 q13.31 Tumor suppressor gene Seq+ 73910 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D22A-GCAT TBC1D22A chr22 47393605 - GCAT chr22 38206034 + Exonic hg19 HNSC TCGA-CV-6941-01A 11 7 In-Frame Intra-chr q13.31 q13.1 Seq+ 73911 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D22A-GKN1 TBC1D22A chr22 47274619 - GKN1 chr2 69204627 + Exonic hg19 LUAD TCGA-49-4514-01A 2 1 In-Frame Inter-chr q13.31 p13.3 Tumor suppressor gene 73912 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D22A-GRAMD4 TBC1D22A chr22 47193517 - GRAMD4 chr22 47022648 + Exonic hg19 BRCA TCGA-AR-A24H-01A 5 2 Out-of-frame Intra-chr q13.31 q13.31 73913 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D22A-GRAMD4 TBC1D22A chr22 47308084 - GRAMD4 chr22 47022648 + Exonic hg19 LIHC TCGA-WJ-A86L-01A 2 2 Out-of-frame Intra-chr q13.31 q13.31 73914 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D22A-GRAP2 TBC1D22A chr22 47193517 - GRAP2 chr22 40343097 + Exonic hg19 LUAD TCGA-MN-A4N1-01A 2 3 CDS-5'UTR Intra-chr q13.31 q13.1 73915 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D22A-GTSE1 TBC1D22A chr22 47433094 - GTSE1 chr22 46704047 + Exonic hg19 UCEC TCGA-B5-A1MS-01B 5 4 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 73916 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D22A-GTSE1 TBC1D22A chr22 47158745 - GTSE1 chr22 46722333 + Exonic hg19 STAD TCGA-BR-4366-01A 10 12 In-Frame Intra-chr q13.31 q13.31 Seq+ 73917 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D22A-OTUD7A TBC1D22A chr22 47308084 - OTUD7A chr15 31862400 - Exonic hg19 SKCM TCGA-BF-A5EQ-01A 2 2 In-Frame Inter-chr q13.31 q13.3 Seq+ 73918 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D22A-POLDIP3 TBC1D22A chr22 47193517 - POLDIP3 chr22 42983578 - Exonic hg19 OV TCGA-24-1434-01A 4 4 In-Frame Intra-chr q13.31 q13.2 Seq+ 73919 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D22A-RIBC2 TBC1D22A chr22 47290742 - RIBC2 chr22 45826780 + Exonic hg19 LUAD TCGA-44-7660-01A 5 4 In-Frame Intra-chr q13.31 q13.31 Seq+ 73920 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D22A-RP11-661C8.3 TBC1D22A chr22 47189738 - RP11-661C8.3 chr5 981151 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 16 10 Out-of-frame Inter-chr q13.31 73921 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D22A-SMYD3 TBC1D22A chr22 47274619 - SMYD3 chr1 246093239 - Exonic hg19 SKCM TCGA-ER-A197-06A 3 5 In-Frame Inter-chr q13.31 q44 Transcription factor Seq+ 73922 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D22A-SREBF2 TBC1D22A chr22 47308084 - SREBF2 chr22 42262835 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 93 46 In-Frame Intra-chr q13.31 q13.2 Transcription factor Seq+ 73923 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D22A-TRMU TBC1D22A chr22 47393605 - TRMU chr22 46752739 + Exonic hg19 ESCA TCGA-VR-A8EX-01A 2 5 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 73924 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D22B-CCND3 TBC1D22B chr6 37254848 - CCND3 chr6 41908323 - Exonic hg19 BRCA TCGA-OL-A5RZ-01A 13 5 In-Frame Intra-chr p21.2 p21.1 73925 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D22B-FGD2 TBC1D22B chr6 37259133 - FGD2 chr6 36982422 + Exonic hg19 LIHC TCGA-BC-A3KG-01A 17 9 In-Frame Intra-chr p21.2 p21.2 Seq+ 73926 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D22B-YPEL1 TBC1D22B chr6 37284982 - YPEL1 chr22 22055507 - Exonic hg19 BRCA TCGA-EW-A1J2-01A 6 16 In-Frame Inter-chr p21.2 q11.22 Seq+ 73927 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D23-ABI3BP TBC1D23 chr3 100000691 - ABI3BP chr3 100645325 - Exonic hg19 HNSC TCGA-DQ-7589-01A 2 2 In-Frame Intra-chr q12.1 q12.2 73928 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D23-C3orf26 TBC1D23 chr3 100009545 - C3orf26 chr3 99879274 + Exonic hg19 LUSC TCGA-58-8386-01A 25 21 In-Frame Intra-chr q12.1 Seq+ 73929 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D23-C3orf26 TBC1D23 chr3 100002655 - C3orf26 chr3 99890683 + Exonic hg19 BRCA TCGA-AO-A129-01A 159 75 In-Frame Intra-chr q12.1 Seq+ 73930 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D23-TMEM30C TBC1D23 chr3 100009545 - TMEM30C chr3 99908785 + Exonic hg19 UCS TCGA-N5-A4RT-01A 7 3 CDS-5'UTR Intra-chr q12.1 Seq+ 73931 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D25-ERLIN2 TBC1D25 chrX 48403411 - ERLIN2 chr8 37607077 + Exonic hg19 BRCA TCGA-B6-A1KN-01A 8 12 In-Frame Inter-chr p11.23 p11.23 Seq+ 73932 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D25-HSPA9 TBC1D25 chrX 48403411 - HSPA9 chr5 137897478 - Exonic hg19 PRAD TCGA-KK-A6E1-01A 37 24 Out-of-frame Inter-chr p11.23 q31.2 Seq+ 73933 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D2B-ACSBG1 TBC1D2B chr15 78295647 - ACSBG1 chr15 78472122 - Exonic hg19 UCEC TCGA-D1-A3DG-01A 7 3 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 73934 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D2B-CIB2 TBC1D2B chr15 78346376 - CIB2 chr15 78403618 - Exonic hg19 LIHC TCGA-ED-A7PX-01A 54 58 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 73935 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D2B-INTS4 TBC1D2B chr15 78293961 - INTS4 chr11 77594998 - Exonic hg19 SARC TCGA-DX-A6Z2-01A 17 1 Out-of-frame Inter-chr q25.1 q14.1 Seq+ 73936 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D30-PLP1 TBC1D30 chr12 65222289 - PLP1 chrX 103031781 + Exonic hg19 SARC TCGA-HB-A3YV-01A 4 2 CDS-5'UTR Inter-chr q14.3 q22.2 73937 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D30-PPM1H TBC1D30 chr12 65232631 - PPM1H chr12 63226059 - Exonic hg19 GBM TCGA-19-2624-01A 2 9 In-Frame Intra-chr q14.3 q14.2 Seq+ 73938 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D30-SYT1 TBC1D30 chr12 65179825 - SYT1 chr12 79371579 + Exonic hg19 SARC TCGA-DX-A1L3-01A 16 2 5'UTR-5'UTR Intra-chr q14.3 q21.2 Seq+ 73939 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D4-COMMD6 TBC1D4 chr13 76055406 - COMMD6 chr13 76111811 - Exonic hg19 BRCA TCGA-E2-A14N-01A 9 17 In-Frame Intra-chr q22.2 q22.2 Seq+ 73940 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D4-COMMD6 TBC1D4 chr13 76055406 - COMMD6 chr13 76104402 - Exonic hg19 BRCA TCGA-OL-A5S0-01A 47 37 In-Frame Intra-chr q22.2 q22.2 Seq+ 73941 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D4-KLF12 TBC1D4 chr13 76055406 - KLF12 chr13 74387424 - Exonic hg19 LUSC TCGA-77-A5G3-01A 3 6 Out-of-frame Intra-chr q22.2 q22.1 Transcription factor Seq+ 73942 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D4-TTC15 TBC1D4 chr13 75884078 - TTC15 chr2 3447550 + Exonic hg19 BLCA TCGA-BT-A20J-01A 11 3 Out-of-frame Inter-chr q22.2 73943 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D5-HTT TBC1D5 chr3 17783973 - HTT chr4 3225133 + Exonic hg19 KIRC TCGA-B0-4696-01A 8 8 5'UTR-CDS Inter-chr p24.3 p16.3 Seq+ 73944 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D5-SETD5 TBC1D5 chr3 17469942 - SETD5 chr3 9477412 + Exonic hg19 LUAD TCGA-L9-A8F4-01A 4 4 Out-of-frame Intra-chr p24.3 p25.3 Seq+ 73945 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D5-TOP2B TBC1D5 chr3 17783973 - TOP2B chr3 25642716 - Exonic hg19 BRCA TCGA-GM-A2DD-01A 4 5 5'UTR-CDS Intra-chr p24.3 p24.2 Seq+ 73946 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D8-CREG2 TBC1D8 chr2 101706716 - CREG2 chr2 101971828 - Exonic hg19 BLCA TCGA-E7-A5KE-01A 18 5 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 73947 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D8-RNF149 TBC1D8 chr2 101675883 - RNF149 chr2 101902639 - Exonic hg19 STAD TCGA-RD-A8MW-01A 2 7 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 73948 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D8-RNF149 TBC1D8 chr2 101638143 - RNF149 chr2 101898519 - Exonic hg19 BLCA TCGA-SY-A9G5-01A 4 4 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 73949 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D8B-RNF128 TBC1D8B chrX 106046213 - RNF128 chrX 106038810 + Exonic hg19 BLCA TCGA-C4-A0F6-01A 11 6 In-Frame Intra-chr q22.3 q22.3 Seq+ 73950 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D8B-RNF128 TBC1D8B chrX 106046213 - RNF128 chrX 106028295 + Exonic hg19 UCS TCGA-N6-A4V9-01A 2 1 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 73951 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D9-CORO1C TBC1D9 chr4 141591874 - CORO1C chr12 109072170 - Exonic hg19 BRCA TCGA-BH-A0BR-01A 24 29 In-Frame Inter-chr q31.21 q24.11 Seq+ 73952 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D9-SMARCA5 TBC1D9 chr4 141560240 - SMARCA5 chr4 144438508 + Exonic hg19 BRCA TCGA-BH-A0BR-01A 6 6 In-Frame Intra-chr q31.21 q31.21 Seq+ 73953 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D9B-ODZ2 TBC1D9B chr5 179334704 - ODZ2 chr5 167302991 + Exonic hg19 LUAD TCGA-95-A4VK-01A 9 3 In-Frame Intra-chr 73954 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D9B-RNF130 TBC1D9B chr5 179331702 - RNF130 chr5 179347426 - Exonic hg19 LUSC TCGA-96-A4JK-01A 98 41 CDS-3'UTR Intra-chr q35.3 Seq+ 73955 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBC1D9B-TYK2 TBC1D9B chr5 179289743 - TYK2 chr19 10491352 - Exonic hg19 BRCA TCGA-BH-A18V-06A 2 1 Out-of-frame Inter-chr p13.2 TK:JakA 73956 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBCD-ASPSCR1 TBCD chr17 80730383 - ASPSCR1 chr17 79967362 + Exonic hg19 LUSC TCGA-39-5034-01A 2 3 In-Frame Intra-chr q25.3 Seq+ 73957 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBCD-CCDC57 TBCD chr17 80772810 - CCDC57 chr17 80059742 - Exonic hg19 ESCA TCGA-L5-A4OW-01A 11 72 In-Frame Intra-chr q25.3 Seq+ 73958 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBCD-FOXK2 TBCD chr17 80861354 - FOXK2 chr17 80559179 + Exonic hg19 LIHC TCGA-BC-A3KG-01A 9 3 In-Frame Intra-chr q25.3 Transcription factor Seq+ 73959 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBCD-FOXK2 TBCD chr17 80828256 - FOXK2 chr17 80521230 + Exonic hg19 BRCA TCGA-E9-A248-01A 2 5 In-Frame Intra-chr q25.3 Transcription factor Seq+ 73960 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBCD-FOXK2 TBCD chr17 80714091 - FOXK2 chr17 80544939 + Exonic hg19 PAAD TCGA-RB-A7B8-01A 5 13 In-Frame Intra-chr q25.3 Transcription factor Seq+ 73961 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBCD-GLIPR2 TBCD chr17 80842078 - GLIPR2 chr9 36147783 + Exonic hg19 ACC TCGA-OR-A5J1-01A 8 5 Out-of-frame Inter-chr p13.3 Seq+ 73962 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBCD-HLCS TBCD chr17 80888519 - HLCS chr21 38139586 - Exonic hg19 SARC TCGA-HB-A43Z-01A 70 27 In-Frame Inter-chr q22.13 Seq+ 73963 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBCD-NFIX TBCD chr17 80899359 - NFIX chr19 13135835 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 15 11 In-Frame Inter-chr p13.13 Transcription factor Seq+ 73964 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBCD-RPTOR TBCD chr17 80755678 - RPTOR chr17 78931424 + Exonic hg19 LUAD TCGA-97-A4M3-01A 2 2 In-Frame Intra-chr q25.3 Seq+ 73965 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBCD-SLC9A3R1 TBCD chr17 80847573 - SLC9A3R1 chr17 72758151 + Exonic hg19 BRCA TCGA-A7-A26G-01A 84 44 In-Frame Intra-chr q25.1 Tumor suppressor gene Seq+ 73966 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBCE-AIM2 TBCE chr1 235564902 - AIM2 chr1 159102146 - Exonic hg19 BRCA TCGA-OL-A5D8-01A 10 6 Out-of-frame Intra-chr q23.2 Tumor suppressor gene Seq+ 73967 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBCE-GGPS1 TBCE chr1 235564902 - GGPS1 chr1 235505023 + Exonic hg19 LUSC TCGA-37-A5EN-01A 16 7 Out-of-frame Intra-chr q42.3 Seq+ 73968 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBCE-GGPS1 TBCE chr1 235543464 - GGPS1 chr1 235505023 + Exonic hg19 LUSC TCGA-77-A5G7-01B 2 3 In-Frame Intra-chr q42.3 Seq+ 73969 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBCE-MAPRE2 TBCE chr1 235606226 - MAPRE2 chr18 32681910 + Exonic hg19 THYM TCGA-ZB-A962-01A 3 6 Out-of-frame Inter-chr q12.1 Seq+ 73970 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBCE-SIPA1L2 TBCE chr1 235530819 - SIPA1L2 chr1 232629406 - Exonic hg19 MESO TCGA-SH-A9CU-01A 4 6 5'UTR-CDS Intra-chr q42.2 Seq+ 73971 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBCE-TBC1D22A TBCE chr1 235543464 - TBC1D22A chr22 47507404 + Exonic hg19 BRCA TCGA-B6-A0X1-01A 8 1 Out-of-frame Inter-chr q13.31 Seq+ 73972 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBCK-SLC9B2 TBCK chr4 107216251 - SLC9B2 chr4 103947748 - Exonic hg19 LUSC TCGA-56-8305-01A 7 1 Out-of-frame Intra-chr q24 Other:TBCK q24 73973 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBCK-USP10 TBCK chr4 107016639 - USP10 chr16 84806147 + Exonic hg19 BRCA TCGA-B6-A0RS-01A 5 3 In-Frame Inter-chr q24 Other:TBCK q24.1 73974 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBCK-WDHD1 TBCK chr4 107092252 - WDHD1 chr14 55434112 - Exonic hg19 PRAD TCGA-M7-A725-01A 2 5 Out-of-frame Inter-chr q24 Other:TBCK q22.3 Seq+ 73975 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBK1-ARHGAP5 TBK1 chr12 64849737 - ARHGAP5 chr14 32559708 + Exonic hg19 BRCA TCGA-AO-A03O-01A 2 3 CDS-5'UTR Inter-chr q14.2 Other:IKK q12 Seq+ 73976 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBK1-C12orf56 TBK1 chr12 64868170 - C12orf56 chr12 64746836 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 8 4 Out-of-frame Intra-chr q14.2 Other:IKK q14.2 73977 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBK1-C7orf64 TBK1 chr12 64889555 - C7orf64 chr7 92161718 + Exonic hg19 ESCA TCGA-VR-A8ET-01A 2 28 Out-of-frame Inter-chr q14.2 Other:IKK 73978 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBK1-CDK19 TBK1 chr12 64879293 - CDK19 chr6 110935869 - Exonic hg19 SARC TCGA-DX-A1L4-01A 26 15 In-Frame Inter-chr q14.2 Other:IKK q21 Seq+ 73979 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBK1-GRIP1 TBK1 chr12 64849737 - GRIP1 chr12 66859202 - Exonic hg19 SKCM TCGA-GN-A26D-06A 45 28 Out-of-frame Intra-chr q14.2 Other:IKK q14.3 Seq+ 73980 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBK1-TMBIM4 TBK1 chr12 64849737 - TMBIM4 chr12 66547228 - Exonic hg19 SARC TCGA-DX-AB35-01A 115 96 Out-of-frame Intra-chr q14.2 Other:IKK q14.3 Seq+ 73981 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBK1-TMTC2 TBK1 chr12 64849737 - TMTC2 chr12 83455547 + Exonic hg19 SARC TCGA-DX-AB35-01A 13 40 Out-of-frame Intra-chr q14.2 Other:IKK q21.31 Seq+ 73982 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBL1X-CASK TBL1X chrX 9469889 - CASK chrX 41712480 - Exonic hg19 BRCA TCGA-A1-A0SN-01A 4 1 5'UTR-CDS Intra-chr p22.31 p11.4 CAMK:CASK Seq+ 73983 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBL1X-GPR143 TBL1X chrX 9665469 - GPR143 chrX 9693880 - Exonic hg19 BLCA TCGA-CU-A3KJ-01A 4 5 In-Frame Intra-chr p22.31 p22.2 Seq+ 73984 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBL1X-GPR143 TBL1X chrX 9469889 - GPR143 chrX 9711713 - Exonic hg19 HNSC TCGA-HL-7533-01A 55 36 5'UTR-CDS Intra-chr p22.31 p22.2 Seq+ 73985 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBL1XR1-AC135352.2 TBL1XR1 chr3 176914909 - AC135352.2 chr8 12863711 + Exonic hg19 HNSC TCGA-CV-7101-01A 6 3 Out-of-frame Inter-chr q26.32 73986 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBL1XR1-ADAM33 TBL1XR1 chr3 176914909 - ADAM33 chr20 3657790 - Exonic hg19 PRAD TCGA-EJ-8469-01A 37 16 5'UTR-CDS Inter-chr q26.32 p13 Seq+ 73987 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBL1XR1-ATG7 TBL1XR1 chr3 176914909 - ATG7 chr3 11596285 + Exonic hg19 ACC TCGA-OR-A5JY-01A 2 2 5'UTR-CDS Intra-chr q26.32 p25.3 Seq+ 73988 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBL1XR1-CACNA1C TBL1XR1 chr3 176816254 - CACNA1C chr12 2721069 + Exonic hg19 BRCA TCGA-D8-A27V-01A 36 30 5'UTR-CDS Inter-chr q26.32 p13.33 Seq+ 73989 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBL1XR1-DCUN1D1 TBL1XR1 chr3 176914909 - DCUN1D1 chr3 182683541 - Exonic hg19 ESCA TCGA-LN-A8I1-01A 8 47 5'UTR-CDS Intra-chr q26.32 q26.33 Oncogene Seq+ 73990 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBL1XR1-IQCJ-SCHIP1 TBL1XR1 chr3 176816254 - IQCJ-SCHIP1 chr3 159482232 + Exonic hg19 BLCA TCGA-G2-AA3B-01A 4 13 Out-of-frame Intra-chr q26.32 q25.32 73991 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBL1XR1-LXN TBL1XR1 chr3 176750759 - LXN chr3 158388808 - Exonic hg19 BRCA TCGA-A8-A08X-01A 9 12 In-Frame Intra-chr q26.32 q25.32 Tumor suppressor gene Seq+ 73992 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBL1XR1-MAST3 TBL1XR1 chr3 176914909 - MAST3 chr19 18245389 + Exonic hg19 OV TCGA-24-0970-01B 12 4 5'UTR-CDS Inter-chr q26.32 p13.11 AGC:MAST Seq+ 73993 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBL1XR1-MCF2L2 TBL1XR1 chr3 176914909 - MCF2L2 chr3 183107567 - Exonic hg19 ESCA TCGA-LN-A8I1-01A 3 22 5'UTR-CDS Intra-chr q26.32 q27.1 Seq+ 73994 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBL1XR1-MIPEP TBL1XR1 chr3 176914909 - MIPEP chr13 24330757 - Exonic hg19 OV TCGA-31-1959-01A 5 20 5'UTR-CDS Inter-chr q26.32 q12.12 Seq+ 73995 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBL1XR1-PIK3CA TBL1XR1 chr3 176914909 - PIK3CA chr3 178916538 + Exonic hg19 BRCA TCGA-C8-A26X-01A 7 19 5'UTR-5'UTR Intra-chr q26.32 q26.32 Oncogene Seq+ 73996 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBL1XR1-PIK3CA TBL1XR1 chr3 176914909 - PIK3CA chr3 178916538 + Exonic hg19 BRCA TCGA-E2-A14P-01A 2 9 5'UTR-5'UTR Intra-chr q26.32 q26.32 Oncogene Seq+ 73997 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBL1XR1-PIK3CA TBL1XR1 chr3 176914909 - PIK3CA chr3 178916538 + Exonic hg19 PRAD TCGA-EJ-5507-01A 10 18 5'UTR-5'UTR Intra-chr q26.32 q26.32 Oncogene Seq+ 73998 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBL1XR1-RET TBL1XR1 chr3 176765088 - RET chr10 43612032 + Exonic hg19 THCA TCGA-ET-A40R-01A 66 35 In-Frame Inter-chr q26.32 q11.21 TK:Ret Oncogene Seq+ 73999 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBL1XR1-ROCK1 TBL1XR1 chr3 176914909 - ROCK1 chr18 18619524 - Exonic hg19 STAD TCGA-BR-7901-01A 5 13 5'UTR-CDS Inter-chr q26.32 q11.1 AGC:DMPK Seq+ 74000 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBL1XR1-RP11-433C9.2 TBL1XR1 chr3 176914909 - RP11-433C9.2 chr3 184144380 + Exonic hg19 BRCA TCGA-A8-A08P-01A 27 138 Out-of-frame Intra-chr q26.32 74001 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBL1XR1-STAT3 TBL1XR1 chr3 176914909 - STAT3 chr17 40500557 - Exonic hg19 READ TCGA-AG-3731-01A 85 106 5'UTR-5'UTR Inter-chr q26.32 q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 74002 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBL1XR1-TP73 TBL1XR1 chr3 176771561 - TP73 chr1 3624113 + Exonic hg19 DLBC TCGA-FA-A4XK-01A 11 21 In-Frame Inter-chr q26.32 p36.32 Tumor suppressor gene Transcription factor Seq+ 74003 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBL1XR1-USP13 TBL1XR1 chr3 176763917 - USP13 chr3 179478900 + Exonic hg19 BRCA TCGA-A8-A07G-01A 349 262 In-Frame Intra-chr q26.32 q26.33 Seq+ 74004 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBP-FAM120B TBP chr6 170873720 - FAM120B chr6 170713638 + Exonic hg19 CESC TCGA-EA-A556-01A 6 9 Out-of-frame Intra-chr q27 Transcription factor Seq+ 74005 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBX1-SEPT5 TBX1 chr22 19752636 - SEPT5 chr22 19707125 + Exonic hg19 LUAD TCGA-55-8506-01A 9 5 In-Frame Intra-chr q11.21 Transcription factor q11.21 74006 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBX15-AP4B1 TBX15 chr1 119530214 - AP4B1 chr1 114447415 - Exonic hg19 SKCM TCGA-D3-A8GJ-06A 5 1 5'UTR-5'UTR Intra-chr p12 Transcription factor p13.2 Seq+ 74007 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBX15-FMN2 TBX15 chr1 119530214 - FMN2 chr1 240421245 + Exonic hg19 SARC TCGA-DX-A2J0-01A 8 6 5'UTR-CDS Intra-chr p12 Transcription factor q43 Seq+ 74008 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBX15-MAGI3 TBX15 chr1 119530214 - MAGI3 chr1 114123164 + Exonic hg19 SARC TCGA-DX-A2J0-01A 10 3 5'UTR-CDS Intra-chr p12 Transcription factor p13.2 Seq+ 74009 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBX19-PCP4L1 TBX19 chr1 168278115 - PCP4L1 chr1 161253458 + Exonic hg19 SARC TCGA-DX-A1L2-01A 6 4 Out-of-frame Intra-chr q24.2 Transcription factor q23.3 Seq+ 74010 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBX3-BIK TBX3 chr12 115120617 - BIK chr22 43520022 + Exonic hg19 BRCA TCGA-A7-A3IZ-01A 10 4 CDS-5'UTR Inter-chr q24.21 Transcription factor q13.2 Tumor suppressor gene Seq+ 74011 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TBXAS1-TOMM7 TBXAS1 chr7 139529278 - TOMM7 chr7 22857667 - Exonic hg19 STAD TCGA-KB-A93J-01A 5 14 Out-of-frame Intra-chr q34 p15.3 Seq+ 74012 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TC2N-FBLN5 TC2N chr14 92278656 - FBLN5 chr14 92409305 - Exonic hg19 BRCA TCGA-JL-A3YW-01A 4 1 Out-of-frame Intra-chr q32.12 Seq+ 74013 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TC2N-FBLN5 TC2N chr14 92278656 - FBLN5 chr14 92361416 - Exonic hg19 BRCA TCGA-LL-A5YO-01A 2 1 In-Frame Intra-chr q32.12 Seq+ 74014 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TC2N-LPP TC2N chr14 92280047 - LPP chr3 188583988 + Exonic hg19 LUSC TCGA-43-5668-01A 104 81 Out-of-frame Inter-chr q27.3 Oncogene Seq+ 74015 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TC2N-TRIP11 TC2N chr14 92280047 - TRIP11 chr14 92442533 - Exonic hg19 LIHC TCGA-BC-A216-01A 10 6 In-Frame Intra-chr q32.12 Oncogene Seq+ 74016 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TC2N-TRIP11 TC2N chr14 92302715 - TRIP11 chr14 92460256 - Exonic hg19 BRCA TCGA-BH-A0EE-01A 10 9 5'UTR-CDS Intra-chr q32.12 Oncogene Seq+ 74017 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TC2N-TRIP11 TC2N chr14 92278656 - TRIP11 chr14 92474196 - Exonic hg19 STAD TCGA-BR-8289-01A 2 19 Out-of-frame Intra-chr q32.12 Oncogene Seq+ 74018 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCEA3-ASAP3 TCEA3 chr1 23743742 - ASAP3 chr1 23782687 - Exonic hg19 CESC TCGA-DS-A1OC-01A 7 3 Out-of-frame Intra-chr Seq+ 74019 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCEANC2-MICU1 TCEANC2 chr1 54534570 - MICU1 chr10 74237014 - Exonic hg19 READ TCGA-F5-6810-01A 21 7 In-Frame Inter-chr p32.3 q22.1 Seq+ 74020 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCEB3-IFT140 TCEB3 chr1 24080950 - IFT140 chr16 1608135 - Exonic hg19 BRCA TCGA-A8-A07O-01A 72 107 In-Frame Inter-chr Tumor suppressor gene p13.3 Seq+ 74021 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCEB3-ZCCHC11 TCEB3 chr1 24083615 - ZCCHC11 chr1 52874132 - Exonic hg19 PRAD TCGA-J9-A52E-01A 9 8 Out-of-frame Intra-chr Tumor suppressor gene p32.3 74022 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCERG1L-CNTN1 TCERG1L chr10 133106474 - CNTN1 chr12 41302159 + Exonic hg19 LGG TCGA-S9-A7R3-01A 10 7 CDS-5'UTR Inter-chr q26.3 q12 Seq+ 74023 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF12-DSCAM TCF12 chr15 57384089 - DSCAM chr21 41741172 - Exonic hg19 PRAD TCGA-M7-A725-01A 3 5 In-Frame Inter-chr q21.3 Oncogene Transcription factor q22.2 Seq+ 74024 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF12-FAM70B TCF12 chr15 57555472 - FAM70B chr13 114469088 + Exonic hg19 BRCA TCGA-A2-A3Y0-01A 3 10 Out-of-frame Inter-chr q21.3 Oncogene Transcription factor 74025 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF12-MGST2 TCF12 chr15 57213296 - MGST2 chr4 140599697 + Exonic hg19 BRCA TCGA-GI-A2C9-01A 10 7 In-Frame Inter-chr q21.3 Oncogene Transcription factor q31.1 Seq+ 74026 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF12-NCOA3 TCF12 chr15 57213296 - NCOA3 chr20 46211927 + Exonic hg19 BLCA TCGA-C4-A0F7-01A 19 19 5'UTR-5'UTR Inter-chr q21.3 Oncogene Transcription factor q13.12 Transcription factor Seq+ 74027 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF12-NPAS1 TCF12 chr15 57213296 - NPAS1 chr19 47542294 + Exonic hg19 PRAD TCGA-EJ-A8FO-01A 20 10 In-Frame Inter-chr q21.3 Oncogene Transcription factor q13.32 Transcription factor Seq+ 74028 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF12-RGMA TCF12 chr15 57384089 - RGMA chr15 93595737 - Exonic hg19 STAD TCGA-CG-4304-01A 9 3 In-Frame Intra-chr q21.3 Oncogene Transcription factor q26.1 74029 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF12-TEX9 TCF12 chr15 57213296 - TEX9 chr15 56665639 + Exonic hg19 BRCA TCGA-A2-A04T-01A 11 19 Out-of-frame Intra-chr q21.3 Oncogene Transcription factor q21.3 Seq+ 74030 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF12-TTC23 TCF12 chr15 57213296 - TTC23 chr15 99762069 - Exonic hg19 PRAD TCGA-V1-A8WS-01A 3 2 Out-of-frame Intra-chr q21.3 Oncogene Transcription factor q26.3 Seq+ 74031 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF20-MKL1 TCF20 chr22 42605657 - MKL1 chr22 40831558 - Exonic hg19 LUAD TCGA-93-8067-01A 18 10 Out-of-frame Intra-chr Transcription factor q13.2 Seq+ 74032 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF25-SPIRE2 TCF25 chr16 89965280 - SPIRE2 chr16 89935975 + Exonic hg19 LUAD TCGA-55-8508-01A 10 13 In-Frame Intra-chr q24.3 q24.3 Seq+ 74033 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF25-SPIRE2 TCF25 chr16 89940267 - SPIRE2 chr16 89934597 + Exonic hg19 BRCA TCGA-A2-A0D2-01A 9 15 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 74034 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF25-SPIRE2 TCF25 chr16 89954125 - SPIRE2 chr16 89911730 + Exonic hg19 UCEC TCGA-D1-A3JQ-01A 7 5 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 74035 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF3-AP3D1 TCF3 chr19 1621837 - AP3D1 chr19 2111827 - Exonic hg19 BRCA TCGA-A7-A13D-01B 3 4 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p13.3 Seq+ 74036 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF3-APC2 TCF3 chr19 1619110 - APC2 chr19 1452983 + Exonic hg19 PRAD TCGA-HC-7744-01A 4 1 CDS-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p13.3 74037 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF3-DNAJC11 TCF3 chr19 1619779 - DNAJC11 chr1 6714099 - Exonic hg19 STAD TCGA-BR-7197-01A 38 205 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p36.31 Tumor suppressor gene Seq+ 74038 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF3-SYTL5 TCF3 chr19 1615284 - SYTL5 chrX 37985841 + Exonic hg19 BRCA TCGA-AR-A0U3-01A 39 38 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p11.4 Seq+ 74039 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF4-MAML3 TCF4 chr18 52921728 - MAML3 chr4 140812121 - Exonic hg19 PCPG TCGA-WB-A80Y-01A 8 4 In-Frame Inter-chr q21.2 Tumor suppressor gene Transcription factor q31.1 Seq+ 74040 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF7L1-DNAH6 TCF7L1 chr2 85361573 - DNAH6 chr2 84972204 + Exonic hg19 LUAD TCGA-55-6972-01A 5 2 Out-of-frame Intra-chr p11.2 Oncogene Transcription factor p11.2 Seq+ 74041 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF7L1-GFPT1 TCF7L1 chr2 85361573 - GFPT1 chr2 69601245 - Exonic hg19 SARC TCGA-K1-A6RV-01A 8 1 Out-of-frame Intra-chr p11.2 Oncogene Transcription factor p13.3 74042 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF7L1-KCMF1 TCF7L1 chr2 85361573 - KCMF1 chr2 85255012 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 2 2 Out-of-frame Intra-chr p11.2 Oncogene Transcription factor p11.2 Transcription factor Seq+ 74043 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF7L1-NFASC TCF7L1 chr2 85361573 - NFASC chr1 204913354 + Exonic hg19 LIHC TCGA-CC-A3MB-01A 4 1 CDS-5'UTR Inter-chr p11.2 Oncogene Transcription factor q32.1 74044 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF7L1-WIF1 TCF7L1 chr2 85361573 - WIF1 chr12 65471634 - Exonic hg19 BRCA TCGA-E2-A1LI-01A 132 55 In-Frame Inter-chr p11.2 Oncogene Transcription factor q14.3 Tumor suppressor gene Seq+ 74045 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF7L2-CHD7 TCF7L2 chr10 114799885 - CHD7 chr8 61693559 + Exonic hg19 COAD TCGA-F4-6807-01A 11 11 In-Frame Inter-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q12.2 Seq+ 74046 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF7L2-TACC2 TCF7L2 chr10 114799885 - TACC2 chr10 123954555 + Exonic hg19 BRCA TCGA-AO-A0J6-01A 4 1 Out-of-frame Intra-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q26.13 Seq+ 74047 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF7L2-VTI1A TCF7L2 chr10 114799885 - VTI1A chr10 114286846 + Exonic hg19 READ TCGA-AG-3731-01A 18 18 In-Frame Intra-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q25.2 Seq+ 74048 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF7L2-VTI1A TCF7L2 chr10 114724383 - VTI1A chr10 114575049 + Exonic hg19 UCEC TCGA-AJ-A3QS-01A 7 4 Out-of-frame Intra-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q25.2 Seq+ 74049 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF7L2-VTI1A TCF7L2 chr10 114905856 - VTI1A chr10 114575049 + Exonic hg19 LIHC TCGA-DD-A1EB-01A 22 15 In-Frame Intra-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q25.2 Seq+ 74050 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF7L2-VTI1A TCF7L2 chr10 114799885 - VTI1A chr10 114575049 + Exonic hg19 LIHC TCGA-DD-A73F-01A 16 10 Out-of-frame Intra-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q25.2 Seq+ 74051 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF7L2-VTI1A TCF7L2 chr10 114799885 - VTI1A chr10 114427977 + Exonic hg19 LIHC TCGA-DD-AAE4-01A 16 17 Out-of-frame Intra-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q25.2 Seq+ 74052 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCF7L2-VTI1A TCF7L2 chr10 114799885 - VTI1A chr10 114286846 + Exonic hg19 PRAD TCGA-ZG-A9LN-01A 4 4 In-Frame Intra-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q25.2 Seq+ 74053 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCHP-PPTC7 TCHP chr12 110342598 - PPTC7 chr12 110976078 - Exonic hg19 PRAD TCGA-YL-A8SP-01B 4 1 In-Frame Intra-chr q24.11 Tumor suppressor gene q24.11 74054 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCIRG1-TMC5 TCIRG1 chr11 67818362 - TMC5 chr16 19451282 + Exonic hg19 PRAD TCGA-G9-6351-01A 2 1 3'UTR-5'UTR Inter-chr q13.2 p12.3 74055 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCN2-THOC5 TCN2 chr22 31010488 - THOC5 chr22 29908125 - Exonic hg19 COAD TCGA-AD-6965-01A 8 7 In-Frame Intra-chr q12.2 q12.2 Seq+ 74056 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCP11L1-SYT9 TCP11L1 chr11 33094199 - SYT9 chr11 7324270 + Exonic hg19 BRCA TCGA-S3-AA17-01A 4 4 Out-of-frame Intra-chr p13 p15.4 Seq+ 74057 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCTA-ARIH2 TCTA chr3 49450543 - ARIH2 chr3 49019093 + Exonic hg19 BRCA TCGA-C8-A132-01A 40 25 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 74058 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCTN1-CPM TCTN1 chr12 111078954 - CPM chr12 69236109 - Exonic hg19 SARC TCGA-DX-A23V-01A 26 27 Out-of-frame Intra-chr q24.11 q15 74059 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCTN1-FGGY TCTN1 chr12 111052207 - FGGY chr1 59787208 + Exonic hg19 SARC TCGA-DX-A23V-01A 58 18 5'UTR-5'UTR Inter-chr q24.11 p32.1 Seq+ 74060 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TCTN3-DHCR24 TCTN3 chr10 97442408 - DHCR24 chr1 55316918 - Exonic hg19 BRCA TCGA-BH-A1FE-06A 2 3 CDS-3'UTR Inter-chr q24.1 p32.3 74061 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TDG-CDK17 TDG chr12 104359838 - CDK17 chr12 96683065 - Exonic hg19 SARC TCGA-3B-A9HL-01A 105 98 Out-of-frame Intra-chr q23.3 q23.1 Seq+ 74062 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TDG-STAB2 TDG chr12 104359838 - STAB2 chr12 104155078 + Exonic hg19 BRCA TCGA-AO-A1KQ-01A 6 6 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 74063 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TDRD12-TEAD2 TDRD12 chr19 33268135 - TEAD2 chr19 49854622 - Exonic hg19 PRAD TCGA-V1-A9O5-06A 45 27 In-Frame Intra-chr q13.11 q13.33 Transcription factor Seq+ 74064 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TDRD3-CUL4A TDRD3 chr13 60971539 - CUL4A chr13 113907396 + Exonic hg19 SKCM TCGA-D3-A5GR-06A 462 650 Out-of-frame Intra-chr q21.2 q34 Seq+ 74065 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TDRD3-DIAPH3 TDRD3 chr13 61084889 - DIAPH3 chr13 60499004 - Exonic hg19 BRCA TCGA-AN-A0FY-01A 2 3 In-Frame Intra-chr q21.2 q21.2 Seq+ 74066 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TDRD3-ESD TDRD3 chr13 61109367 - ESD chr13 47345631 - Exonic hg19 GBM TCGA-06-1804-01A 5 9 In-Frame Intra-chr q21.2 q14.2 Seq+ 74067 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TDRD3-LHFP TDRD3 chr13 60971539 - LHFP chr13 39952663 - Exonic hg19 BRCA TCGA-LL-A73Y-01A 5 5 Out-of-frame Intra-chr q21.2 q14.11 Seq+ 74068 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TDRD7-GNA14 TDRD7 chr9 100194520 - GNA14 chr9 80144169 - Exonic hg19 PRAD TCGA-HC-7821-01A 2 1 Out-of-frame Intra-chr q22.33 q21.2 Seq+ 74069 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEAD1-CAP2 TEAD1 chr11 12697108 - CAP2 chr6 17463227 + Exonic hg19 BRCA TCGA-B6-A0RT-01A 14 4 5'UTR-CDS Inter-chr p15.3 Transcription factor p22.3 Seq+ 74070 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEAD1-CD47 TEAD1 chr11 12697108 - CD47 chr3 107779699 - Exonic hg19 BLCA TCGA-XF-A9ST-01A 67 57 5'UTR-CDS Inter-chr p15.3 Transcription factor q13.12 Seq+ 74071 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEAD1-CTR9 TEAD1 chr11 12923660 - CTR9 chr11 10784978 + Exonic hg19 UCEC TCGA-EO-A3KU-01A 16 6 In-Frame Intra-chr p15.3 Transcription factor p15.4 Seq+ 74072 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEAD1-FAR1 TEAD1 chr11 12697108 - FAR1 chr11 13716306 + Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 4 1 5'UTR-5'UTR Intra-chr p15.3 Transcription factor p15.3 74073 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEAD1-INSC TEAD1 chr11 12904672 - INSC chr11 15222370 + Exonic hg19 SARC TCGA-FX-A3TO-01A 19 10 In-Frame Intra-chr p15.3 Transcription factor p15.2 Seq+ 74074 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEAD1-MICAL2 TEAD1 chr11 12697108 - MICAL2 chr11 12229570 + Exonic hg19 PRAD TCGA-EJ-5503-01A 54 43 5'UTR-CDS Intra-chr p15.3 Transcription factor p15.3 Seq+ 74075 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEAD1-PARVA TEAD1 chr11 12697108 - PARVA chr11 12495292 + Exonic hg19 BRCA TCGA-E2-A15E-01A 9 2 5'UTR-CDS Intra-chr p15.3 Transcription factor p15.3 Seq+ 74076 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEAD1-PARVA TEAD1 chr11 12697108 - PARVA chr11 12495292 + Exonic hg19 BRCA TCGA-E2-A15E-06A 14 9 5'UTR-CDS Intra-chr p15.3 Transcription factor p15.3 Seq+ 74077 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEAD1-PARVA TEAD1 chr11 12785981 - PARVA chr11 12549396 + Exonic hg19 BLCA TCGA-E7-A85H-01A 20 11 In-Frame Intra-chr p15.3 Transcription factor p15.3 Seq+ 74078 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEAD1-UVRAG TEAD1 chr11 12785981 - UVRAG chr11 75672488 + Exonic hg19 HNSC TCGA-MZ-A7D7-01A 2 2 Out-of-frame Intra-chr p15.3 Transcription factor q13.5 Tumor suppressor gene 74079 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEAD1-ZCCHC8 TEAD1 chr11 12696381 - ZCCHC8 chr12 122967242 - Exonic hg19 LIHC TCGA-ZS-A9CF-01A 10 2 5'UTR-CDS Inter-chr p15.3 Transcription factor q24.31 Seq+ 74080 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEAD1-ZCCHC8 TEAD1 chr11 12697108 - ZCCHC8 chr12 122968110 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 20 16 5'UTR-CDS Inter-chr p15.3 Transcription factor q24.31 Seq+ 74081 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEAD2-NOSIP TEAD2 chr19 49858405 - NOSIP chr19 50060506 - Exonic hg19 STAD TCGA-BR-8060-01A 9 50 Out-of-frame Intra-chr q13.33 Transcription factor q13.33 Seq+ 74082 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEAD3-ZFAND3 TEAD3 chr6 35464675 - ZFAND3 chr6 38084348 + Exonic hg19 SARC TCGA-DX-A8BU-01A 10 22 5'UTR-CDS Intra-chr p21.31 Transcription factor p21.2 Seq+ 74083 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEAD4-CD82 TEAD4 chr12 3069206 - CD82 chr11 44609025 + Exonic hg19 STAD TCGA-BR-8485-01A 2 4 5'UTR-5'UTR Inter-chr p13.33 Transcription factor p11.2 Tumor suppressor gene 74084 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEAD4-ERC1 TEAD4 chr12 3069206 - ERC1 chr12 1553728 + Exonic hg19 SARC TCGA-FX-A3TO-01A 8 2 5'UTR-5'UTR Intra-chr p13.33 Transcription factor Seq+ 74085 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEAD4-KIAA0528 TEAD4 chr12 3069206 - KIAA0528 chr12 22646271 - Exonic hg19 BRCA TCGA-E2-A1LL-01A 7 11 5'UTR-CDS Intra-chr p13.33 Transcription factor Seq+ 74086 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEAD4-MAP3K12 TEAD4 chr12 3069206 - MAP3K12 chr12 53880929 - Exonic hg19 SARC TCGA-DX-A1KZ-01A 18 5 Out-of-frame Intra-chr p13.33 Transcription factor q13.13 Seq+ 74087 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEAD4-TULP3 TEAD4 chr12 3121398 - TULP3 chr12 3018695 + Exonic hg19 KIRC TCGA-CJ-6030-01A 4 5 Out-of-frame Intra-chr p13.33 Transcription factor p13.33 Seq+ 74088 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEC-NCAM2 TEC chr4 48271769 - NCAM2 chr21 22746183 + Exonic hg19 LUAD TCGA-93-A4JQ-01A 6 2 5'UTR-CDS Inter-chr p11 TK:Tec Tumor suppressor gene q21.1 Tumor suppressor gene Seq+ 74089 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEC-PASD1 TEC chr4 48271769 - PASD1 chrX 150789402 + Exonic hg19 BRCA TCGA-GM-A2DH-01A 6 4 5'UTR-CDS Inter-chr p11 TK:Tec Tumor suppressor gene q28 Seq+ 74090 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TECPR1-ZFR TECPR1 chr7 97880731 - ZFR chr5 32364381 - Exonic hg19 LUSC TCGA-98-8022-01A 3 2 5'UTR-CDS Inter-chr q21.3 p13.3 74091 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TECPR2-WDR20 TECPR2 chr14 102931626 - WDR20 chr14 102675199 + Exonic hg19 LIHC TCGA-FV-A496-01A 4 2 CDS-5'UTR Intra-chr q32.31 q32.31 74092 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TECR-ICAM3 TECR chr19 14640523 - ICAM3 chr19 10449624 - Exonic hg19 BLCA TCGA-GU-A42Q-01A 22 8 Out-of-frame Intra-chr p13.12 p13.2 Seq+ 74093 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TECR-NDUFB7 TECR chr19 14640523 - NDUFB7 chr19 14677745 - Exonic hg19 LIHC TCGA-DD-AADB-01A 68 34 Out-of-frame Intra-chr p13.12 p13.12 Seq+ 74094 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TECR-PKN1 TECR chr19 14640523 - PKN1 chr19 14574479 + Exonic hg19 LUSC TCGA-43-7658-01A 179 146 In-Frame Intra-chr p13.12 p13.12 AGC:PKN Seq+ 74095 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TECR-PKN1 TECR chr19 14640523 - PKN1 chr19 14580153 + Exonic hg19 UCEC TCGA-A5-A3LP-01A 122 90 Out-of-frame Intra-chr p13.12 p13.12 AGC:PKN Seq+ 74096 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TECTA-FOXN3 TECTA chr11 121000920 - FOXN3 chr14 89629313 - Exonic hg19 PCPG TCGA-RW-A688-01A 2 2 Out-of-frame Inter-chr q23.3 q32.11 Transcription factor Seq+ 74097 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEF-KIF26B TEF chr22 41763603 - KIF26B chr1 245704069 + Exonic hg19 HNSC TCGA-CR-7388-01A 2 2 Out-of-frame Inter-chr q13.2 Transcription factor 74098 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEKT5-RMI2 TEKT5 chr16 10775850 - RMI2 chr16 11444499 + Exonic hg19 BRCA TCGA-AO-A0JL-01A 9 8 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 74099 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TENC1-ACVR1B TENC1 chr12 53445747 - ACVR1B chr12 52378976 + Exonic hg19 BRCA TCGA-C8-A12V-01A 4 7 In-Frame Intra-chr q13.13 Oncogene Seq+ 74100 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TERF2-COG4 TERF2 chr16 69418483 - COG4 chr16 70524295 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 3 3 In-Frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 74101 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TERF2IP-CKLF TERF2IP chr16 75682450 - CKLF chr16 66599789 + Exonic hg19 SKCM TCGA-YG-AA3O-06A 74 42 Out-of-frame Intra-chr q23.1 q21 Tumor suppressor gene Seq+ 74102 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TERF2IP-CMTM1 TERF2IP chr16 75682450 - CMTM1 chr16 66611007 + Exonic hg19 SKCM TCGA-YG-AA3O-06A 88 29 Out-of-frame Intra-chr q23.1 q21 Seq+ 74103 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TESC-ASAH1 TESC chr12 117537030 - ASAH1 chr8 17933096 - Exonic hg19 PRAD TCGA-YL-A9WJ-01A 25 23 Out-of-frame Inter-chr q24.22 p22 Seq+ 74104 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TESC-FBXO21 TESC chr12 117484364 - FBXO21 chr12 117584082 - Exonic hg19 STAD TCGA-BR-A452-01A 9 106 Out-of-frame Intra-chr q24.22 q24.22 Seq+ 74105 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TESK2-C8A TESK2 chr1 45851584 - C8A chr1 57349154 + Exonic hg19 ESCA TCGA-JY-A6F8-01A 2 8 In-Frame Intra-chr p34.1 TKL:LISK p32.2 74106 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TESK2-GNA12 TESK2 chr1 45851584 - GNA12 chr7 2834777 - Exonic hg19 CESC TCGA-EK-A2IR-01A 10 5 In-Frame Inter-chr p34.1 TKL:LISK p22.2 Seq+ 74107 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TESK2-GPR37L1 TESK2 chr1 45923236 - GPR37L1 chr1 202096869 + Exonic hg19 BRCA TCGA-AO-A124-01A 16 6 In-Frame Intra-chr p34.1 TKL:LISK q32.1 Seq+ 74108 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TESK2-KNCN TESK2 chr1 45923236 - KNCN chr1 47015674 - Exonic hg19 SKCM TCGA-GN-A26D-06A 4 2 Out-of-frame Intra-chr p34.1 TKL:LISK p33 Seq+ 74109 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TESK2-UTS2 TESK2 chr1 45923236 - UTS2 chr1 7910982 - Exonic hg19 BRCA TCGA-D8-A1XZ-01A 2 1 Out-of-frame Intra-chr p34.1 TKL:LISK p36.23 74110 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TET1-EFHC2 TET1 chr10 70442730 - EFHC2 chrX 44172002 - Exonic hg19 PRAD TCGA-EJ-7785-01A 6 2 In-Frame Inter-chr q21.3 Oncogene Transcription factor p11.3 Seq+ 74111 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TET1-TMEM222 TET1 chr10 70411693 - TMEM222 chr1 27660449 + Exonic hg19 SARC TCGA-IF-A4AK-01A 9 5 In-Frame Inter-chr q21.3 Oncogene Transcription factor p36.11 74112 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TET2-ADH6 TET2 chr4 106111662 - ADH6 chr4 100137419 - Exonic hg19 LGG TCGA-HT-7472-01A 13 1 5'UTR-CDS Intra-chr q24 Oncogene Tumor suppressor gene Transcription factor q23 Seq+ 74113 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TET2-KLK3 TET2 chr4 106200973 - KLK3 chr19 51358191 + Exonic hg19 PRAD TCGA-EJ-7794-01A 2 1 Out-of-frame Inter-chr q24 Oncogene Tumor suppressor gene Transcription factor q13.33 74114 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TET2-LANCL1 TET2 chr4 106164935 - LANCL1 chr2 211341136 - Exonic hg19 BRCA TCGA-A2-A1FV-01A 23 17 CDS-5'UTR Inter-chr q24 Oncogene Tumor suppressor gene Transcription factor q34 Seq+ 74115 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TET2-LARP7 TET2 chr4 106068136 - LARP7 chr4 113565824 + Exonic hg19 PRAD TCGA-KK-A8I5-01A 6 6 5'UTR-5'UTR Intra-chr q24 Oncogene Tumor suppressor gene Transcription factor q25 Seq+ 74116 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TET3-ACTG2 TET3 chr2 74230293 - ACTG2 chr2 74135800 + Exonic hg19 BRCA TCGA-B6-A3ZX-01A 25 206 5'UTR-CDS Intra-chr p13.1 Transcription factor p13.1 Seq+ 74117 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TET3-ACTG2 TET3 chr2 74230293 - ACTG2 chr2 74128403 + Exonic hg19 BRCA TCGA-E2-A1AZ-01A 6 7 5'UTR-5'UTR Intra-chr p13.1 Transcription factor p13.1 Seq+ 74118 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TET3-C2orf78 TET3 chr2 74275538 - C2orf78 chr2 74040604 + Exonic hg19 BRCA TCGA-C8-A135-01A 8 5 In-Frame Intra-chr p13.1 Transcription factor p13.1 Seq+ 74119 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TET3-DGUOK TET3 chr2 74317174 - DGUOK chr2 74184252 + Exonic hg19 BRCA TCGA-BH-A0BZ-01A 40 42 In-Frame Intra-chr p13.1 Transcription factor p13.1 Seq+ 74120 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TET3-DGUOK TET3 chr2 74230293 - DGUOK chr2 74173846 + Exonic hg19 LGG TCGA-S9-A6WL-01A 105 165 5'UTR-CDS Intra-chr p13.1 Transcription factor p13.1 Seq+ 74121 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TET3-KRT1 TET3 chr2 74317174 - KRT1 chr12 53072007 - Exonic hg19 PRAD TCGA-EJ-7315-01A 13 11 Out-of-frame Inter-chr p13.1 Transcription factor q13.13 74122 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TET3-SPECC1 TET3 chr2 74230293 - SPECC1 chr17 19999944 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 2 3 5'UTR-5'UTR Inter-chr p13.1 Transcription factor p11.2 Seq+ 74123 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEX10-HSDL2 TEX10 chr9 103115054 - HSDL2 chr9 115166275 + Exonic hg19 MESO TCGA-TS-A8AY-01A 29 10 5'UTR-CDS Intra-chr q31.1 q32 Seq+ 74124 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEX14-SDK2 TEX14 chr17 56661861 - SDK2 chr17 71387677 - Exonic hg19 BRCA TCGA-A8-A07I-01A 3 1 Out-of-frame Intra-chr q22 q25.1 74125 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEX2-ACSF2 TEX2 chr17 62248460 - ACSF2 chr17 48538038 + Exonic hg19 BRCA TCGA-3C-AALI-01A 4 5 Out-of-frame Intra-chr q23.3 q21.33 Seq+ 74126 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEX2-ANKFN1 TEX2 chr17 62340528 - ANKFN1 chr17 54559717 + Exonic hg19 LIHC TCGA-RC-A7SB-01A 10 8 5'UTR-CDS Intra-chr q23.3 q22 Seq+ 74127 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEX2-BCAM TEX2 chr17 62248460 - BCAM chr19 45314482 + Exonic hg19 CESC TCGA-EA-A556-01A 22 5 In-Frame Inter-chr q23.3 q13.32 Seq+ 74128 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEX2-CLASP2 TEX2 chr17 62224796 - CLASP2 chr3 33602368 - Exonic hg19 SKCM TCGA-D3-A1QA-06A 2 4 Out-of-frame Inter-chr q23.3 p22.3 74129 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEX2-GDPD1 TEX2 chr17 62340528 - GDPD1 chr17 57322775 + Exonic hg19 BRCA TCGA-BH-A1F2-01A 9 7 5'UTR-CDS Intra-chr q23.3 q22 Seq+ 74130 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEX2-STARD3 TEX2 chr17 62270919 - STARD3 chr17 37813261 + Exonic hg19 STAD TCGA-HU-A4HD-01A 3 108 Out-of-frame Intra-chr q23.3 q12 Seq+ 74131 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEX2-TTYH2 TEX2 chr17 62270919 - TTYH2 chr17 72239513 + Exonic hg19 BRCA TCGA-D8-A27N-01A 10 2 Out-of-frame Intra-chr q23.3 q25.1 Seq+ 74132 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TEX9-CYFIP1 TEX9 chr15 56665702 - CYFIP1 chr15 22990057 + Exonic hg19 LUAD TCGA-75-7031-01A 6 4 In-Frame Intra-chr q21.3 q11.2 Seq+ 74133 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TF-ARFGEF2 TF chr3 133497635 - ARFGEF2 chr20 47615777 + Exonic hg19 LIHC TCGA-ED-A459-01A 2 8 Out-of-frame Inter-chr q22.1 q13.13 74134 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TF-CCT5 TF chr3 133497635 - CCT5 chr5 10250033 + Exonic hg19 LIHC TCGA-G3-A6UC-01A 2 1 Out-of-frame Inter-chr q22.1 p15.2 74135 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TF-TYK2 TF chr3 133497635 - TYK2 chr19 10491352 - Exonic hg19 LIHC TCGA-QA-A7B7-01A 2 27 Out-of-frame Inter-chr q22.1 p13.2 TK:JakA 74136 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TF-UTRN TF chr3 133497635 - UTRN chr6 144665237 + Exonic hg19 LIHC TCGA-DD-A4NL-01A 2 9 Out-of-frame Inter-chr q22.1 q24.2 74137 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFAP2A-CDK5RAP1 TFAP2A chr6 10402725 - CDK5RAP1 chr20 31958435 - Exonic hg19 PRAD TCGA-ZG-A9L9-01A 3 4 In-Frame Inter-chr p24.3 Tumor suppressor gene Transcription factor q11.21 Seq+ 74138 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFAP2A-MAK TFAP2A chr6 10404741 - MAK chr6 10764839 - Exonic hg19 BRCA TCGA-AN-A0AR-01A 13 7 Out-of-frame Intra-chr p24.3 Tumor suppressor gene Transcription factor p24.2 CMGC:RCK Seq+ 74139 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFCP2-POU6F1 TFCP2 chr12 51566084 - POU6F1 chr12 51598151 - Exonic hg19 UCEC TCGA-PG-A7D5-01A 5 1 CDS-3'UTR Intra-chr q13.13 Transcription factor q13.13 Transcription factor 74140 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFCP2L1-CLASP1 TFCP2L1 chr2 122004394 - CLASP1 chr2 122218769 - Exonic hg19 LUAD TCGA-55-8085-01A 10 2 In-Frame Intra-chr q14.2 Transcription factor q14.3 Seq+ 74141 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFDP1-CUL4A TFDP1 chr13 114265377 - CUL4A chr13 113873259 + Exonic hg19 LUAD TCGA-55-8620-01A 667 1013 Out-of-frame Intra-chr q34 Transcription factor q34 Seq+ 74142 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFDP1-CUL4A TFDP1 chr13 114286059 - CUL4A chr13 113883760 + Exonic hg19 BLCA TCGA-FD-A6TD-01A 3 5 Out-of-frame Intra-chr q34 Transcription factor q34 Seq+ 74143 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFDP1-LAMP1 TFDP1 chr13 114240164 - LAMP1 chr13 113973784 + Exonic hg19 LUSC TCGA-56-A4ZK-01A 135 218 Out-of-frame Intra-chr q34 Transcription factor q34 Oncogene Seq+ 74144 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFDP1-TMCO3 TFDP1 chr13 114277601 - TMCO3 chr13 114164553 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 41 98 In-Frame Intra-chr q34 Transcription factor q34 Seq+ 74145 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFDP2-COG5 TFDP2 chr3 141811903 - COG5 chr7 106964966 - Exonic hg19 HNSC TCGA-CR-5247-01A 19 14 Out-of-frame Inter-chr q23 Transcription factor Seq+ 74146 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFDP2-GK5 TFDP2 chr3 141868025 - GK5 chr3 141917775 - Exonic hg19 LGG TCGA-HT-7880-01A 6 4 5'UTR-CDS Intra-chr q23 Transcription factor q23 74147 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFDP2-LANCL2 TFDP2 chr3 141811903 - LANCL2 chr7 55466116 + Exonic hg19 BRCA TCGA-A2-A25F-01A 21 7 In-Frame Inter-chr q23 Transcription factor p11.2 Seq+ 74148 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFDP2-PLD1 TFDP2 chr3 141747421 - PLD1 chr3 171455872 - Exonic hg19 BRCA TCGA-EW-A1P4-01A 5 12 5'UTR-5'UTR Intra-chr q23 Transcription factor q26.31 Tumor suppressor gene Seq+ 74149 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFE3-AC005522.1 TFE3 chrX 48896632 - AC005522.1 chr7 76134691 + Exonic hg19 KIRP TCGA-DZ-6131-01A 39 9 Out-of-frame Inter-chr p11.23 Oncogene Transcription factor q11.23 74150 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFE3-CXorf31 TFE3 chrX 48888912 - CXorf31 chrX 46749814 - Exonic hg19 BRCA TCGA-D8-A1XJ-01A 4 1 CDS-3'UTR Intra-chr p11.23 Oncogene Transcription factor 74151 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFE3-DVL2 TFE3 chrX 48897982 - DVL2 chr17 7132766 - Exonic hg19 KIRP TCGA-J7-8537-01A 50 36 Out-of-frame Inter-chr p11.23 Oncogene Transcription factor p13.1 Seq+ 74152 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFE3-MED15 TFE3 chrX 48895535 - MED15 chr22 20936898 + Exonic hg19 KIRC TCGA-6D-AA2E-01A 44 21 In-Frame Inter-chr p11.23 Oncogene Transcription factor q11.21 Seq+ 74153 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFE3-PRCC TFE3 chrX 48896632 - PRCC chr1 156752074 + Exonic hg19 KIRP TCGA-BQ-5882-01A 121 78 In-Frame Inter-chr p11.23 Oncogene Transcription factor q23.1 KB Seq+ 74154 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFE3-PRCC TFE3 chrX 48896632 - PRCC chr1 156756400 + Exonic hg19 KIRP TCGA-BQ-5887-01A 60 29 In-Frame Inter-chr p11.23 Oncogene Transcription factor q23.1 KB Seq+ 74155 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFE3-SFPQ TFE3 chrX 48900637 - SFPQ chr1 35653691 - Exonic hg19 KIRC TCGA-AK-3456-01A 145 147 In-Frame Inter-chr p11.23 Oncogene Transcription factor p34.3 KB Seq+ 74156 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFEB-COL21A1 TFEB chr6 41703088 - COL21A1 chr6 56047454 - Exonic hg19 KIRP TCGA-BQ-7048-01A 21 10 5'UTR-5'UTR Intra-chr p21.1 Transcription factor p12.1 Seq+ 74157 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFEB-DIP2B TFEB chr6 41703088 - DIP2B chr12 51116985 + Exonic hg19 GBM TCGA-06-0129-01A 27 77 5'UTR-CDS Inter-chr p21.1 Transcription factor q13.12 Seq+ 74158 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFEB-EPS15L1 TFEB chr6 41703884 - EPS15L1 chr19 16488065 - Exonic hg19 STAD TCGA-BR-8590-01A 3 6 5'UTR-CDS Inter-chr p21.1 Transcription factor p13.11 Seq+ 74159 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFEB-MDFI TFEB chr6 41703088 - MDFI chr6 41617357 + Exonic hg19 LUSC TCGA-56-A5DR-01A 24 3 5'UTR-CDS Intra-chr p21.1 Transcription factor p21.1 Seq+ 74160 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFEB-SUPT3H TFEB chr6 41657469 - SUPT3H chr6 44797594 - Exonic hg19 STAD TCGA-VQ-A92D-01A 12 175 In-Frame Intra-chr p21.1 Transcription factor p21.1 Seq+ 74161 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFF1-DDX21 TFF1 chr21 43782391 - DDX21 chr10 70723858 + Exonic hg19 STAD TCGA-BR-8687-01A 2 19 3'UTR-CDS Inter-chr q22.3 q22.1 74162 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFF1-RABEP1 TFF1 chr21 43782391 - RABEP1 chr17 5283828 + Exonic hg19 LUAD TCGA-97-7552-01A 2 123 3'UTR-CDS Inter-chr q22.3 p13.2 74163 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFG-MET TFG chr3 100451516 - MET chr7 116414935 + Exonic hg19 THCA TCGA-FK-A3S3-01A 14 8 In-Frame Inter-chr q12.2 q31.2 TK:Met Oncogene KB Pub Seq+ 74164 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFG-NTRK1 TFG chr3 100455560 - NTRK1 chr1 156844363 + Exonic hg19 THCA TCGA-EM-A3AO-01A 67 158 In-Frame Inter-chr q12.2 q23.1 Oncogene KB Pub Seq+ 74165 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFIP11-AMPD1 TFIP11 chr22 26908065 - AMPD1 chr1 115231362 - Exonic hg19 LUSC TCGA-39-5019-01A 22 8 5'UTR-CDS Inter-chr q12.1 p13.2 Seq+ 74166 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFIP11-IL17RA TFIP11 chr22 26906030 - IL17RA chr22 17577952 + Exonic hg19 BLCA TCGA-XF-AAMW-01A 4 4 Out-of-frame Intra-chr q12.1 q11.1 Seq+ 74167 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFR2-NCOR2 TFR2 chr7 100224386 - NCOR2 chr12 124848345 - Exonic hg19 LIHC TCGA-BC-A3KF-01A 9 5 Out-of-frame Inter-chr q22.1 q24.31 Seq+ 74168 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFRC-CPA3 TFRC chr3 195787051 - CPA3 chr3 148614307 + Exonic hg19 LUSC TCGA-22-5474-01A 53 32 Out-of-frame Intra-chr q29 q24 Seq+ 74169 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFRC-MUTED TFRC chr3 195803935 - MUTED chr6 8041501 - Exonic hg19 PRAD TCGA-G9-A9S7-01A 8 7 In-Frame Inter-chr q29 74170 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFRC-TCTEX1D2 TFRC chr3 195776156 - TCTEX1D2 chr3 196042149 - Exonic hg19 BLCA TCGA-G2-A2ES-01A 4 13 Out-of-frame Intra-chr q29 q29 Seq+ 74171 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TFRC-TCTEX1D2 TFRC chr3 195791180 - TCTEX1D2 chr3 196033883 - Exonic hg19 PRAD TCGA-ZG-A9LN-01A 7 1 In-Frame Intra-chr q29 q29 Seq+ 74172 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TG-THADA TG chr8 133984986 - THADA chr2 43520352 - Exonic hg19 LUAD TCGA-91-6836-01A 4 6 In-Frame Inter-chr q24.22 p21 Seq+ 74173 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TGDS-DAPK1 TGDS chr13 95248305 - DAPK1 chr9 90321047 + Exonic hg19 BRCA TCGA-AO-A0J2-01A 5 1 Out-of-frame Inter-chr q32.1 q21.33 CAMK:DAPK Tumor suppressor gene Seq+ 74174 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TGFB1-CCDC97 TGFB1 chr19 41838033 - CCDC97 chr19 41822289 + Exonic hg19 SARC TCGA-3B-A9HX-01A 14 8 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 Seq+ 74175 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TGFB1-CCDC97 TGFB1 chr19 41847788 - CCDC97 chr19 41828500 + Exonic hg19 KIRC TCGA-BP-4761-01A 90 74 In-Frame Intra-chr q13.2 Tumor suppressor gene q13.2 Seq+ 74176 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TGFB1-FXYD5 TGFB1 chr19 41838033 - FXYD5 chr19 35655059 + Exonic hg19 BLCA TCGA-FD-A3SO-01A 28 14 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.12 Seq+ 74177 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TGFBI-ANXA1 TGFBI chr5 135399504 - ANXA1 chr9 75772570 + Exonic hg19 CESC TCGA-ZJ-AAXN-01A 2 1 Out-of-frame Inter-chr q31.1 Tumor suppressor gene q21.13 Tumor suppressor gene 74178 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TGFBI-RABEP1 TGFBI chr5 135399504 - RABEP1 chr17 5283828 + Exonic hg19 SKCM TCGA-FS-A1ZH-06A 2 11 Out-of-frame Inter-chr q31.1 Tumor suppressor gene p13.2 74179 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TGFBI-TNNT1 TGFBI chr5 135399504 - TNNT1 chr19 55646910 - Exonic hg19 LUAD TCGA-69-7978-01A 2 1 Out-of-frame Inter-chr q31.1 Tumor suppressor gene q13.42 74180 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TGFBR1-COL15A1 TGFBR1 chr9 101910066 - COL15A1 chr9 101777699 + Exonic hg19 LIHC TCGA-RC-A6M3-01A 21 20 In-Frame Intra-chr q22.33 q22.33 Seq+ 74181 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TGFBR2-NR2C2 TGFBR2 chr3 30648469 - NR2C2 chr3 15055096 + Exonic hg19 LUAD TCGA-MP-A4TK-01A 3 2 Out-of-frame Intra-chr p24.1 Oncogene Tumor suppressor gene p25.1 Tumor suppressor gene Transcription factor Seq+ 74182 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TGFBR2-XPC TGFBR2 chr3 30648469 - XPC chr3 14214562 - Exonic hg19 SARC TCGA-DX-A1L2-01A 58 58 In-Frame Intra-chr p24.1 Oncogene Tumor suppressor gene p25.1 Oncogene Seq+ 74183 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TGFBR3-ANKS1A TGFBR3 chr1 92200333 - ANKS1A chr6 35085023 + Exonic hg19 BRCA TCGA-GI-A2C9-01A 3 4 3'UTR-3'UTR Inter-chr p22.1 Tumor suppressor gene p21.31 74184 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TGFBR3-EDARADD TGFBR3 chr1 92327028 - EDARADD chr1 236572516 + Exonic hg19 BRCA TCGA-A7-A4SA-01A 3 3 In-Frame Intra-chr p22.1 Tumor suppressor gene q42.3 Seq+ 74185 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TGFBR3-NRD1 TGFBR3 chr1 92327028 - NRD1 chr1 52306186 - Exonic hg19 SKCM TCGA-EB-A82C-01A 11 3 Out-of-frame Intra-chr p22.1 Tumor suppressor gene 74186 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TGFBRAP1-AC007000.1 TGFBRAP1 chr2 105912813 - AC007000.1 chr7 76866264 + Exonic hg19 HNSC TCGA-CV-5431-01A 2 2 Out-of-frame Inter-chr q12.2 q11.23 74187 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TGFBRAP1-ARHGAP15 TGFBRAP1 chr2 105885729 - ARHGAP15 chr2 144193170 + Exonic hg19 SARC TCGA-DX-AB2O-01A 2 3 In-Frame Intra-chr q12.2 q22.2 Seq+ 74188 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TGFBRAP1-DPP10 TGFBRAP1 chr2 105912813 - DPP10 chr2 116066815 + Exonic hg19 SARC TCGA-DX-A8BU-01A 9 7 In-Frame Intra-chr q12.2 q14.1 Seq+ 74189 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TGIF1-DDX19B TGIF1 chr18 3447795 - DDX19B chr16 70348805 + Exonic hg19 LUAD TCGA-44-7667-01A 25 14 In-Frame Inter-chr p11.31 Transcription factor q22.1 Seq+ 74190 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TGIF2-DLGAP4 TGIF2 chr20 35207369 - DLGAP4 chr20 35068157 + Exonic hg19 BRCA TCGA-C8-A12K-01A 11 3 Out-of-frame Intra-chr q11.23 Transcription factor q11.23 Seq+ 74191 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TGM2-ACVRL1 TGM2 chr20 36756863 - ACVRL1 chr12 52306155 + Exonic hg19 SKCM TCGA-EE-A2GE-06A 2 2 Out-of-frame Inter-chr q11.23 q13.13 Oncogene 74192 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TGOLN2-FOXP1 TGOLN2 chr2 85545150 - FOXP1 chr3 71007472 - Exonic hg19 BRCA TCGA-LL-A5YN-01A 2 4 Out-of-frame Inter-chr p11.2 p13 Oncogene Tumor suppressor gene Transcription factor 74193 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TGOLN2-IMMT TGOLN2 chr2 85552038 - IMMT chr2 86372004 - Exonic hg19 UCEC TCGA-PG-A7D5-01A 13 18 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 74194 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THADA-CCDC19 THADA chr2 43725972 - CCDC19 chr1 159863095 - Exonic hg19 BRCA TCGA-E9-A22D-01A 6 4 In-Frame Inter-chr p21 74195 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THADA-EML4 THADA chr2 43571261 - EML4 chr2 42556026 + Exonic hg19 LUSC TCGA-66-2756-01A 16 4 Out-of-frame Intra-chr p21 p21 Oncogene Seq+ 74196 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THADA-IGF2BP3 THADA chr2 43625110 - IGF2BP3 chr7 23458443 - Exonic hg19 THCA TCGA-BJ-A28V-01A 2 2 Out-of-frame Inter-chr p21 p15.3 Seq+ 74197 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THADA-UBR2 THADA chr2 43547585 - UBR2 chr6 42582809 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 4 2 In-Frame Inter-chr p21 p21.1 Seq+ 74198 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THAP1-SFRP1 THAP1 chr8 42698167 - SFRP1 chr8 41161057 - Exonic hg19 SKCM TCGA-ER-A42H-01A 2 2 Out-of-frame Intra-chr p11.21 Transcription factor p11.21 Tumor suppressor gene Seq+ 74199 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THAP2-GRIP1 THAP2 chr12 72058360 - GRIP1 chr12 66935730 - Exonic hg19 BRCA TCGA-BH-A1EW-01A 4 3 Out-of-frame Intra-chr q21.1 Transcription factor q14.3 Seq+ 74200 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THAP2-RAPGEF3 THAP2 chr12 72058360 - RAPGEF3 chr12 48145752 - Exonic hg19 SARC TCGA-DX-AB2H-01A 3 2 Out-of-frame Intra-chr q21.1 Transcription factor q13.11 Seq+ 74201 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THAP2-YEATS4 THAP2 chr12 72058360 - YEATS4 chr12 69783927 + Exonic hg19 SARC TCGA-DX-AB2H-01A 248 263 Out-of-frame Intra-chr q21.1 Transcription factor q15 Seq+ 74202 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THAP3-LCK THAP3 chr1 6685352 - LCK chr1 32739926 + Exonic hg19 PAAD TCGA-2J-AAB1-01A 2 1 CDS-5'UTR Intra-chr p36.31 Transcription factor p35.2 TK:Src Oncogene 74203 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THAP4-DOCK10 THAP4 chr2 242541311 - DOCK10 chr2 225761094 - Exonic hg19 LGG TCGA-S9-A6U6-01A 6 1 In-Frame Intra-chr q37.3 Transcription factor q36.2 Seq+ 74204 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THAP7-NRG1 THAP7 chr22 21354936 - NRG1 chr8 32453346 + Exonic hg19 LUSC TCGA-63-A5MP-01A 9 1 Out-of-frame Inter-chr q11.21 Transcription factor p12 Seq+ 74205 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THAP8-WDR62 THAP8 chr19 36545037 - WDR62 chr19 36549682 + Exonic hg19 BRCA TCGA-BH-A1F6-01A 9 4 Out-of-frame Intra-chr q13.12 Transcription factor q13.12 74206 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THBS1-AGBL1 THBS1 chr15 39881555 - AGBL1 chr15 86790902 + Exonic hg19 HNSC TCGA-CV-6960-01A 3035 2139 Out-of-frame Intra-chr q14 Oncogene Tumor suppressor gene q25.3 Seq+ 74207 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THBS1-NRG1 THBS1 chr15 39876623 - NRG1 chr8 32585467 + Exonic hg19 HNSC TCGA-CN-5370-01A 53 30 Out-of-frame Inter-chr q14 Oncogene Tumor suppressor gene p12 Seq+ 74208 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THBS2-NME4 THBS2 chr6 169646292 - NME4 chr16 448990 + Exonic hg19 BRCA TCGA-AC-A2BK-01A 3 3 In-Frame Inter-chr q27 p13.3 Seq+ 74209 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THEM4-DCST2 THEM4 chr1 151881836 - DCST2 chr1 154999191 - Exonic hg19 BRCA TCGA-C8-A3M8-01A 12 14 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 74210 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THEM4-S100A10 THEM4 chr1 151881836 - S100A10 chr1 151958727 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 3 8 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 74211 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THOC1-GLI3 THOC1 chr18 223440 - GLI3 chr7 42262894 - Exonic hg19 SARC TCGA-K1-A42X-01A 9 10 CDS-5'UTR Inter-chr p11.32 p14.1 Transcription factor 74212 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THOC1-GLI3 THOC1 chr18 223440 - GLI3 chr7 42262894 - Exonic hg19 SARC TCGA-K1-A42X-02A 4 3 CDS-5'UTR Inter-chr p11.32 p14.1 Transcription factor 74213 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THOC1-THADA THOC1 chr18 252539 - THADA chr2 43655370 - Exonic hg19 UCS TCGA-N8-A4PO-01A 14 6 In-Frame Inter-chr p11.32 p21 Seq+ 74214 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THOC5-NIPSNAP1 THOC5 chr22 29949660 - NIPSNAP1 chr22 29957851 - Exonic hg19 OV TCGA-24-1470-01A 7 18 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 74215 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THOC5-PIBF1 THOC5 chr22 29916987 - PIBF1 chr13 73505303 + Exonic hg19 BLCA TCGA-GU-AATP-01A 4 1 In-Frame Inter-chr q12.2 q21.33 Seq+ 74216 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THOP1-NOTCH3 THOP1 chr19 2785676 - NOTCH3 chr19 15308389 - Exonic hg19 SARC TCGA-FX-A3NK-01A 2 1 In-Frame Intra-chr p13.3 p13.12 Oncogene Tumor suppressor gene Seq+ 74217 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THRA-B4GALNT2 THRA chr17 38233861 - B4GALNT2 chr17 47236399 + Exonic hg19 BRCA TCGA-BH-A0AW-01A 8 6 In-Frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.32 Seq+ 74218 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THRA-CDK12 THRA chr17 38245586 - CDK12 chr17 37686884 + Exonic hg19 STAD TCGA-BR-8289-01A 2 26 Out-of-frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q12 Oncogene Seq+ 74219 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THRA-GSDMA THRA chr17 38233861 - GSDMA chr17 38121936 + Exonic hg19 GBM TCGA-16-1045-01B 24 74 CDS-5'UTR Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Seq+ 74220 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THRA-KRT20 THRA chr17 38245586 - KRT20 chr17 39033669 - Exonic hg19 UCS TCGA-N5-A4RT-01A 340 154 In-Frame Intra-chr q21.1 Tumor suppressor gene Transcription factor Seq+ 74221 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THRA-PSMD3 THRA chr17 38241068 - PSMD3 chr17 38142828 + Exonic hg19 LUSC TCGA-85-8479-01A 31 18 In-Frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Seq+ 74222 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THRA-PSMD3 THRA chr17 38245586 - PSMD3 chr17 38140547 + Exonic hg19 LUAD TCGA-95-7043-01A 4 9 Out-of-frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Seq+ 74223 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THRA-TADA2A THRA chr17 38219345 - TADA2A chr17 35771356 + Exonic hg19 BRCA TCGA-D8-A1XJ-01A 14 16 5'UTR-5'UTR Intra-chr q21.1 Tumor suppressor gene Transcription factor q12 Seq+ 74224 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THRAP3-CAPZB THRAP3 chr1 36690106 - CAPZB chr1 19705147 - Exonic hg19 LUAD TCGA-49-4507-01A 187 173 5'UTR-CDS Intra-chr p34.3 p36.13 Seq+ 74225 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THRAP3-EIF2C3 THRAP3 chr1 36725085 - EIF2C3 chr1 36499775 + Exonic hg19 LUAD TCGA-05-4426-01A 15 17 5'UTR-CDS Intra-chr p34.3 Seq+ 74226 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THRAP3-EIF2C3 THRAP3 chr1 36725085 - EIF2C3 chr1 36469942 + Exonic hg19 HNSC TCGA-CV-A45Z-01A 6 6 5'UTR-5'UTR Intra-chr p34.3 Seq+ 74227 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THRAP3-EPHB2 THRAP3 chr1 36725085 - EPHB2 chr1 23107914 + Exonic hg19 BRCA TCGA-A7-A26J-01A 25 23 5'UTR-CDS Intra-chr p34.3 p36.12 Tumor suppressor gene Seq+ 74228 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THRAP3-ERI3 THRAP3 chr1 36690106 - ERI3 chr1 44778900 - Exonic hg19 LUAD TCGA-71-8520-01A 16 6 5'UTR-CDS Intra-chr p34.3 p34.1 Seq+ 74229 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THRAP3-MAP7D1 THRAP3 chr1 36690106 - MAP7D1 chr1 36636572 + Exonic hg19 BRCA TCGA-LL-A6FQ-01A 6 6 5'UTR-CDS Intra-chr p34.3 p34.3 Seq+ 74230 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THRAP3-MAP7D1 THRAP3 chr1 36690106 - MAP7D1 chr1 36645267 + Exonic hg19 ACC TCGA-OR-A5JZ-01A 87 45 5'UTR-CDS Intra-chr p34.3 p34.3 Seq+ 74231 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THRAP3-MAP7D1 THRAP3 chr1 36748301 - MAP7D1 chr1 36636572 + Exonic hg19 LIHC TCGA-RC-A6M6-01A 6 12 Out-of-frame Intra-chr p34.3 p34.3 Seq+ 74232 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THRAP3-MUTYH THRAP3 chr1 36690106 - MUTYH chr1 45800183 - Exonic hg19 BRCA TCGA-E2-A14T-01A 10 10 5'UTR-5'UTR Intra-chr p34.3 p34.1 Oncogene Seq+ 74233 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THRAP3-NFIA THRAP3 chr1 36725085 - NFIA chr1 61869776 + Exonic hg19 SARC TCGA-K1-A3PO-01A 11 6 5'UTR-CDS Intra-chr p34.3 p31.3 Transcription factor 74234 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THRAP3-TRAPPC3 THRAP3 chr1 36690106 - TRAPPC3 chr1 36605767 - Exonic hg19 KIRP TCGA-J7-8537-01A 3 3 5'UTR-CDS Intra-chr p34.3 p34.3 Seq+ 74235 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THRB-LMCD1 THRB chr3 24184992 - LMCD1 chr3 8574423 + Exonic hg19 BRCA TCGA-A2-A0CW-01A 21 21 In-Frame Intra-chr p24.2 Tumor suppressor gene Transcription factor p25.3 Seq+ 74236 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THRB-PVRL3 THRB chr3 24338717 - PVRL3 chr3 110830877 + Exonic hg19 LGG TCGA-HT-7477-01B 23 7 5'UTR-CDS Intra-chr p24.2 Tumor suppressor gene Transcription factor 74237 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THRSP-KCTD14 THRSP chr11 77775387 - KCTD14 chr11 77728316 - Exonic hg19 BRCA TCGA-AN-A0FV-01A 58 21 3'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 74238 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THSD4-ADAM10 THSD4 chr15 71549054 - ADAM10 chr15 58957396 - Exonic hg19 STAD TCGA-CG-4444-01A 6 8 CDS-3'UTR Intra-chr q23 q21.3 74239 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THSD4-ALDH1A2 THSD4 chr15 71704162 - ALDH1A2 chr15 58306479 - Exonic hg19 BRCA TCGA-AO-A03P-01A 146 110 In-Frame Intra-chr q23 q21.3 Tumor suppressor gene Seq+ 74240 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THSD4-C15orf60 THSD4 chr15 71704162 - C15orf60 chr15 73832826 + Exonic hg19 CESC TCGA-VS-A8QF-01A 8 9 In-Frame Intra-chr q23 Seq+ 74241 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THSD4-LRRC49 THSD4 chr15 71447271 - LRRC49 chr15 71341748 + Exonic hg19 BRCA TCGA-A2-A0YH-01A 3 2 In-Frame Intra-chr q23 q23 Seq+ 74242 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THSD4-LRRC49 THSD4 chr15 71389345 - LRRC49 chr15 71256124 + Exonic hg19 BRCA TCGA-A2-A4S3-01A 29 28 5'UTR-CDS Intra-chr q23 q23 Seq+ 74243 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THSD4-LRRC49 THSD4 chr15 71389345 - LRRC49 chr15 71329518 + Exonic hg19 BRCA TCGA-BH-A0DK-01A 3 3 5'UTR-CDS Intra-chr q23 q23 Seq+ 74244 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THSD4-LRRC49 THSD4 chr15 71507738 - LRRC49 chr15 71256124 + Exonic hg19 CESC TCGA-C5-A2LT-01A 2 3 In-Frame Intra-chr q23 q23 Seq+ 74245 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THSD4-LRRC49 THSD4 chr15 71704162 - LRRC49 chr15 71185923 + Exonic hg19 BRCA TCGA-C8-A26Z-01A 12 17 In-Frame Intra-chr q23 q23 Seq+ 74246 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THSD4-LRRC49 THSD4 chr15 71447271 - LRRC49 chr15 71272440 + Exonic hg19 BRCA TCGA-EW-A2FS-01A 45 53 In-Frame Intra-chr q23 q23 Seq+ 74247 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THSD4-LRRC49 THSD4 chr15 71447271 - LRRC49 chr15 71329518 + Exonic hg19 BRCA TCGA-GI-A2C8-01A 179 150 Out-of-frame Intra-chr q23 q23 Seq+ 74248 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THSD4-WARS THSD4 chr15 71839820 - WARS chr14 100803539 - Exonic hg19 LUSC TCGA-63-A5MP-01A 114 77 Out-of-frame Inter-chr q23 q32.2 Seq+ 74249 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THSD4-ZNF710 THSD4 chr15 71549054 - ZNF710 chr15 90610342 + Exonic hg19 KICH TCGA-KL-8341-01A 5 1 CDS-5'UTR Intra-chr q23 q26.1 Transcription factor Seq+ 74250 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THSD7B-DARS THSD7B chr2 137523257 - DARS chr2 136741024 - Exonic hg19 PRAD TCGA-KK-A59X-01A 3 5 5'UTR-CDS Intra-chr q22.1 q21.3 Seq+ 74251 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq THUMPD2-VSNL1 THUMPD2 chr2 40006254 - VSNL1 chr2 17830677 + Exonic hg19 LUAD TCGA-55-A4DG-01A 11 7 In-Frame Intra-chr p22.1 p24.2 Tumor suppressor gene Seq+ 74252 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TIA1-ACTR2 TIA1 chr2 70463211 - ACTR2 chr2 65478161 + Exonic hg19 PRAD TCGA-KK-A7AP-01A 22 38 In-Frame Intra-chr p13.3 p14 TKL:STKR Seq+ 74253 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TIA1-BCL11A TIA1 chr2 70475537 - BCL11A chr2 60695968 - Exonic hg19 LUAD TCGA-64-1676-01A 16 4 Out-of-frame Intra-chr p13.3 p16.1 Oncogene Transcription factor Seq+ 74254 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TIA1-FAM136A TIA1 chr2 70475537 - FAM136A chr2 70528112 - Exonic hg19 LUSC TCGA-94-8491-01A 11 8 Out-of-frame Intra-chr p13.3 p13.3 74255 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TIA1-MRPL33 TIA1 chr2 70475537 - MRPL33 chr2 28002300 + Exonic hg19 LGG TCGA-QH-A6XC-01A 12 6 In-Frame Intra-chr p13.3 p23.2 Seq+ 74256 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TIA1-TGFA TIA1 chr2 70475537 - TGFA chr2 70692865 - Exonic hg19 BRCA TCGA-AR-A256-01A 38 38 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 74257 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TIAF1-LRRC37B TIAF1 chr17 27413456 - LRRC37B chr17 30357675 + Exonic hg19 BRCA TCGA-C8-A1HK-01A 9 7 5'UTR-CDS Intra-chr q11.2 Oncogene q11.2 74258 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TIAL1-CUZD1 TIAL1 chr10 121355946 - CUZD1 chr10 124605736 - Exonic hg19 BRCA TCGA-A2-A04U-01A 6 8 CDS-5'UTR Intra-chr q26.11 q26.13 Seq+ 74259 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TIAM1-FBLIM1 TIAM1 chr21 32711558 - FBLIM1 chr1 16111043 + Exonic hg19 BRCA TCGA-AC-A3OD-01B 5 1 5'UTR-CDS Inter-chr q22.11 p36.21 Seq+ 74260 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TIAM1-NCAM2 TIAM1 chr21 32931240 - NCAM2 chr21 22696703 + Exonic hg19 SARC TCGA-QC-AA9N-01A 8 4 5'UTR-CDS Intra-chr q22.11 q21.1 Tumor suppressor gene Seq+ 74261 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TIAM1-NRIP1 TIAM1 chr21 32638326 - NRIP1 chr21 16340847 - Exonic hg19 BRCA TCGA-E9-A248-01A 6 5 CDS-5'UTR Intra-chr q22.11 q21.1 KB Pub Seq+ 74262 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TIAM1-PCBP3 TIAM1 chr21 32711558 - PCBP3 chr21 47316122 + Exonic hg19 HNSC TCGA-CR-7367-01A 13 11 5'UTR-CDS Intra-chr q22.11 q22.3 Seq+ 74263 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TIAM2-PPIL4 TIAM2 chr6 155486543 - PPIL4 chr6 149826840 - Exonic hg19 SARC TCGA-DX-A1L0-01A 3 3 In-Frame Intra-chr q25.2 q25.1 Seq+ 74264 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TICAM1-IL12RB1 TICAM1 chr19 4831626 - IL12RB1 chr19 18180523 - Exonic hg19 LUAD TCGA-05-4426-01A 70 47 5'UTR-CDS Intra-chr p13.3 p13.11 Seq+ 74265 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TICAM1-PTPRS TICAM1 chr19 4831626 - PTPRS chr19 5265207 - Exonic hg19 BRCA TCGA-BH-A0HY-01A 6 2 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 74266 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TICAM1-TLE2 TICAM1 chr19 4831626 - TLE2 chr19 3028801 - Exonic hg19 BRCA TCGA-E2-A574-01A 5 3 5'UTR-5'UTR Intra-chr p13.3 p13.3 74267 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TIMELESS-BAZ2A TIMELESS chr12 56843094 - BAZ2A chr12 56997484 - Exonic hg19 UCEC TCGA-AJ-A6NU-01A 14 5 5'UTR-CDS Intra-chr q13.3 q13.3 Transcription factor Seq+ 74268 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TIMM17A-RASSF5 TIMM17A chr1 201926702 - RASSF5 chr1 206711501 + Exonic hg19 BRCA TCGA-BH-A203-01A 21 7 In-Frame Intra-chr q32.1 q32.1 Tumor suppressor gene Seq+ 74269 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TIMM22-C17orf51 TIMM22 chr17 902824 - C17orf51 chr17 21438799 - Exonic hg19 SARC TCGA-IE-A3OV-01A 21 9 In-Frame Intra-chr p11.2 Seq+ 74270 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TIMM44-MPND TIMM44 chr19 8005987 - MPND chr19 4345742 + Exonic hg19 SARC TCGA-DX-A8BL-01A 3 1 In-Frame Intra-chr p13.2 p13.3 74271 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TIMM9-FCF1 TIMM9 chr14 58890726 - FCF1 chr14 75189975 + Exonic hg19 LGG TCGA-DU-7006-01A 96 66 5'UTR-CDS Intra-chr q23.1 q24.3 Seq+ 74272 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TIMP1-EIF2AK2 TIMP1 chrX 47446188 - EIF2AK2 chr2 37342384 - Exonic hg19 SKCM TCGA-EE-A2MK-06A 2 14 Out-of-frame Inter-chr p11.3 p22.2 74273 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TIMP2-ANXA1 TIMP2 chr17 76849059 - ANXA1 chr9 75772570 + Exonic hg19 PAAD TCGA-IB-7885-01A 2 18 3'UTR-5'UTR Inter-chr q25.3 q21.13 Tumor suppressor gene 74274 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TIMP2-CEP57 TIMP2 chr17 76849059 - CEP57 chr11 95551991 + Exonic hg19 PRAD TCGA-G9-6499-01A 2 11 3'UTR-CDS Inter-chr q25.3 q21 74275 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TIMP3-SPCS3 TIMP3 chr22 33259030 - SPCS3 chr4 177243321 + Exonic hg19 PRAD TCGA-HC-7745-01A 2 2 3'UTR-CDS Inter-chr q12.3 Oncogene Tumor suppressor gene q34.2 74276 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TIMP3-ZNFX1 TIMP3 chr22 33259030 - ZNFX1 chr20 47863418 - Exonic hg19 SKCM TCGA-GN-A26C-01A 2 2 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene q13.13 74277 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TIPIN-ATP8B4 TIPIN chr15 66648977 - ATP8B4 chr15 50226379 - Exonic hg19 SARC TCGA-LI-A9QH-01A 2 3 5'UTR-CDS Intra-chr q22.31 q21.2 Seq+ 74278 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TIRAP-FOXRED1 TIRAP chr11 126160856 - FOXRED1 chr11 126142864 + Exonic hg19 STAD TCGA-HU-A4HD-01A 2 4 Out-of-frame Intra-chr q24.2 q24.2 74279 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TJAP1-ABCC10 TJAP1 chr6 43446456 - ABCC10 chr6 43409600 + Exonic hg19 LUSC TCGA-85-8353-01A 21 18 5'UTR-CDS Intra-chr p21.1 p21.1 Seq+ 74280 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TJP1-SLC20A1 TJP1 chr15 30114205 - SLC20A1 chr2 113405230 + Exonic hg19 SKCM TCGA-ER-A197-06A 29 8 Out-of-frame Inter-chr q14.1 Seq+ 74281 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TJP1-TYK2 TJP1 chr15 29992356 - TYK2 chr19 10491352 - Exonic hg19 KIRC TCGA-A3-3374-01A 2 1 Out-of-frame Inter-chr p13.2 TK:JakA 74282 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TJP2-FXN TJP2 chr9 71766687 - FXN chr9 71714817 + Exonic hg19 TGCT TCGA-2G-AALW-01A 2 2 5'UTR-CDS Intra-chr q21.11 q21.11 Tumor suppressor gene Seq+ 74283 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TJP2-FXN TJP2 chr9 71766687 - FXN chr9 71661301 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 3 3 5'UTR-CDS Intra-chr q21.11 q21.11 Tumor suppressor gene Seq+ 74284 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TJP2-FXN TJP2 chr9 71766687 - FXN chr9 71661301 + Exonic hg19 ESCA TCGA-L5-A4OQ-01A 4 53 5'UTR-CDS Intra-chr q21.11 q21.11 Tumor suppressor gene Seq+ 74285 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TJP2-RPRD2 TJP2 chr9 71789348 - RPRD2 chr1 150429764 + Exonic hg19 SKCM TCGA-FS-A1ZK-06A 8 1 In-Frame Inter-chr q21.11 q21.2 Seq+ 74286 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TJP2-STX17 TJP2 chr9 71766687 - STX17 chr9 102677460 + Exonic hg19 LUSC TCGA-96-A4JK-01A 6 1 5'UTR-5'UTR Intra-chr q21.11 q31.1 74287 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TJP2-TMEM38B TJP2 chr9 71845148 - TMEM38B chr9 108536146 + Exonic hg19 BRCA TCGA-A2-A0EW-01A 24 12 In-Frame Intra-chr q21.11 q31.2 Seq+ 74288 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TJP3-LRRC8E TJP3 chr19 3721908 - LRRC8E chr19 7960484 + Exonic hg19 LUSC TCGA-66-2766-01A 5 2 5'UTR-5'UTR Intra-chr p13.3 p13.2 74289 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TJP3-ZNF554 TJP3 chr19 3740761 - ZNF554 chr19 2832301 + Exonic hg19 BRCA TCGA-C8-A12L-01A 2 2 In-Frame Intra-chr p13.3 p13.3 Transcription factor 74290 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TK1-DNAH17 TK1 chr17 76171131 - DNAH17 chr17 76423189 - Exonic hg19 BLCA TCGA-GV-A3QF-01A 19 10 In-Frame Intra-chr q25.3 q25.3 Seq+ 74291 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TK2-EXOC3L1 TK2 chr16 66570867 - EXOC3L1 chr16 67223083 - Exonic hg19 LUAD TCGA-38-4630-01A 6 4 Out-of-frame Intra-chr q21 q22.1 Seq+ 74292 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TLCD1-NEK8 TLCD1 chr17 27052922 - NEK8 chr17 27061001 + Exonic hg19 LUAD TCGA-69-A59K-01A 5 3 In-Frame Intra-chr q11.2 q11.2 Other:NEK Seq+ 74293 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TLE3-THAP10 TLE3 chr15 70386871 - THAP10 chr15 71175247 - Exonic hg19 HNSC TCGA-CN-4738-01A 47 24 In-Frame Intra-chr q23 q23 Transcription factor Seq+ 74294 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TLK1-ADK TLK1 chr2 171939291 - ADK chr10 76429941 + Exonic hg19 OV TCGA-59-A5PD-01A 4 60 Out-of-frame Inter-chr q31.1 Other:TLK q22.2 Seq+ 74295 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TLK1-CAT TLK1 chr2 171974249 - CAT chr11 34470739 + Exonic hg19 BRCA TCGA-EW-A1P7-01A 10 6 In-Frame Inter-chr q31.1 Other:TLK p13 Tumor suppressor gene Seq+ 74296 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TLK1-CREG2 TLK1 chr2 171902684 - CREG2 chr2 101971828 - Exonic hg19 LUSC TCGA-46-6025-01A 42 21 In-Frame Intra-chr q31.1 Other:TLK q11.2 Seq+ 74297 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TLK1-KCNH7 TLK1 chr2 171974249 - KCNH7 chr2 163393590 - Exonic hg19 ESCA TCGA-L5-A4OQ-01A 3 21 Out-of-frame Intra-chr q31.1 Other:TLK q24.2 Seq+ 74298 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TLK1-SSB TLK1 chr2 171939291 - SSB chr2 170661984 + Exonic hg19 BRCA TCGA-A8-A094-01A 18 18 In-Frame Intra-chr q31.1 Other:TLK q31.1 Seq+ 74299 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TLK2-BCAS3 TLK2 chr17 60558567 - BCAS3 chr17 58945937 + Exonic hg19 LUSC TCGA-94-7943-01A 3 6 Out-of-frame Intra-chr q23.2 Other:TLK q23.2 Seq+ 74300 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TLN1-EIF4G1 TLN1 chr9 35697334 - EIF4G1 chr3 184042892 + Exonic hg19 PRAD TCGA-HC-7213-01A 2 11 3'UTR-CDS Inter-chr p13.3 q27.1 74301 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TLR4-SLC31A1 TLR4 chr9 120471007 - SLC31A1 chr9 116018394 + Exonic hg19 SARC TCGA-DX-A8BV-01A 5 3 5'UTR-5'UTR Intra-chr q33.1 Oncogene q32 74302 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TM2D1-STOX2 TM2D1 chr1 62189385 - STOX2 chr4 184922478 + Exonic hg19 UCEC TCGA-EY-A54A-01A 4 2 In-Frame Inter-chr p31.3 q35.1 74303 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TM2D2-ADAM9 TM2D2 chr8 38853732 - ADAM9 chr8 38865405 + Exonic hg19 BRCA TCGA-B6-A0RE-01A 6 9 Out-of-frame Intra-chr p11.22 Seq+ 74304 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TM2D2-GOT1L1 TM2D2 chr8 38851064 - GOT1L1 chr8 37792733 - Exonic hg19 BLCA TCGA-XF-AAMZ-01A 2 5 In-Frame Intra-chr p11.22 p11.23 Seq+ 74305 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TM2D2-IDO2 TM2D2 chr8 38853732 - IDO2 chr8 39871084 + Exonic hg19 LIHC TCGA-CC-A9FU-01A 39 36 In-Frame Intra-chr p11.22 p11.21 Seq+ 74306 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TM2D2-MSI2 TM2D2 chr8 38852837 - MSI2 chr17 55478740 + Exonic hg19 BRCA TCGA-D8-A1JK-01A 3 7 In-Frame Inter-chr p11.22 q22 Seq+ 74307 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TM2D3-PTRF TM2D3 chr15 102190207 - PTRF chr17 40557406 - Exonic hg19 PRAD TCGA-EJ-5511-01A 729 309 In-Frame Inter-chr q26.3 Seq+ 74308 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TM4SF1-DDX27 TM4SF1 chr3 149086810 - DDX27 chr20 47849303 + Exonic hg19 KIRC TCGA-CJ-6032-01A 2 3 Out-of-frame Inter-chr q25.1 q13.13 74309 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TM7SF3-C12orf42 TM7SF3 chr12 27156169 - C12orf42 chr12 103670988 - Exonic hg19 GBM TCGA-06-0129-01A 2 2 CDS-3'UTR Intra-chr p11.23 q23.2 74310 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TM7SF3-KCNC2 TM7SF3 chr12 27143383 - KCNC2 chr12 75445097 - Exonic hg19 SARC TCGA-DX-A1KZ-01A 58 30 Out-of-frame Intra-chr p11.23 q21.1 Seq+ 74311 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TM7SF3-SNX31 TM7SF3 chr12 27167011 - SNX31 chr8 101612669 - Exonic hg19 LIHC TCGA-2Y-A9H0-01A 7 2 Out-of-frame Inter-chr p11.23 q22.3 Seq+ 74312 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TM9SF3-AVPI1 TM9SF3 chr10 98319416 - AVPI1 chr10 99437782 - Exonic hg19 LIHC TCGA-KR-A7K8-01A 3 2 Out-of-frame Intra-chr q24.1 q24.2 Seq+ 74313 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TM9SF3-PIK3AP1 TM9SF3 chr10 98346491 - PIK3AP1 chr10 98376468 - Exonic hg19 BRCA TCGA-AN-A0FX-01A 7 124 In-Frame Intra-chr q24.1 q24.1 Seq+ 74314 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TM9SF3-RPP30 TM9SF3 chr10 98346491 - RPP30 chr10 92655637 + Exonic hg19 PRAD TCGA-EJ-5497-01A 6 21 In-Frame Intra-chr q24.1 q23.31 Seq+ 74315 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TM9SF3-SLIT1 TM9SF3 chr10 98346491 - SLIT1 chr10 98808875 - Exonic hg19 BRCA TCGA-A7-A6VV-01A 23 36 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 74316 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TM9SF4-COMMD7 TM9SF4 chr20 30749168 - COMMD7 chr20 31315949 - Exonic hg19 COAD TCGA-A6-2675-01A 15 10 In-Frame Intra-chr q11.21 q11.21 Seq+ 74317 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TM9SF4-DEFB123 TM9SF4 chr20 30742989 - DEFB123 chr20 30037832 + Exonic hg19 UCS TCGA-N8-A4PM-01A 367 138 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 74318 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TM9SF4-EYA2 TM9SF4 chr20 30746317 - EYA2 chr20 45618640 + Exonic hg19 LUAD TCGA-44-A47B-01A 11 12 CDS-5'UTR Intra-chr q11.21 q13.12 Seq+ 74319 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TM9SF4-HM13 TM9SF4 chr20 30697558 - HM13 chr20 30136832 + Exonic hg19 GBM TCGA-06-0238-01A 2 11 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 74320 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TM9SF4-HM13 TM9SF4 chr20 30747914 - HM13 chr20 30154013 + Exonic hg19 LUSC TCGA-66-2789-01A 84 49 In-Frame Intra-chr q11.21 q11.21 Seq+ 74321 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TM9SF4-TPX2 TM9SF4 chr20 30697842 - TPX2 chr20 30354359 + Exonic hg19 BRCA TCGA-E2-A1LK-01A 2 3 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 74322 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TM9SF4-ZNF423 TM9SF4 chr20 30723976 - ZNF423 chr16 49823457 - Exonic hg19 PRAD TCGA-HC-A632-01A 27 31 In-Frame Inter-chr q11.21 q12.1 Transcription factor Seq+ 74323 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMBIM4-INO80 TMBIM4 chr12 66563635 - INO80 chr15 41297885 - Exonic hg19 BRCA TCGA-BH-A1EV-01A 12 17 Out-of-frame Inter-chr q14.3 q15.1 Seq+ 74324 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMBIM4-PBX3 TMBIM4 chr12 66563635 - PBX3 chr9 128691934 + Exonic hg19 SARC TCGA-DX-A23Z-01A 66 40 Out-of-frame Inter-chr q14.3 q33.3 Transcription factor Seq+ 74325 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMBIM4-TMEM131 TMBIM4 chr12 66563635 - TMEM131 chr2 98430851 - Exonic hg19 HNSC TCGA-CR-6478-01A 67 19 Out-of-frame Inter-chr q14.3 q11.2 Seq+ 74326 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMBIM6-CLCN3 TMBIM6 chr12 50158717 - CLCN3 chr4 170623929 + Exonic hg19 BLCA TCGA-FD-A3SM-01A 2 10 Out-of-frame Inter-chr q13.12 q33 74327 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMBIM6-CLCN3 TMBIM6 chr12 50158717 - CLCN3 chr4 170623929 + Exonic hg19 PRAD TCGA-G9-6371-01A 2 40 Out-of-frame Inter-chr q13.12 q33 74328 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMBIM6-TYK2 TMBIM6 chr12 50158717 - TYK2 chr19 10491352 - Exonic hg19 KIRC TCGA-A3-3362-01A 2 1 Out-of-frame Inter-chr q13.12 p13.2 TK:JakA 74329 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMC3-C15orf40 TMC3 chr15 81630996 - C15orf40 chr15 83657909 - Exonic hg19 LGG TCGA-DU-A7TC-01A 10 1 Out-of-frame Intra-chr q25.1 q25.2 Seq+ 74330 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMC4-MBOAT7 TMC4 chr19 54668168 - MBOAT7 chr19 54678125 - Exonic hg19 BRCA TCGA-GI-A2C9-01A 9 7 Out-of-frame Intra-chr 74331 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMC6-DNAH17 TMC6 chr17 76120070 - DNAH17 chr17 76496543 - Exonic hg19 LUAD TCGA-44-7660-01A 3 7 In-Frame Intra-chr q25.3 q25.3 Seq+ 74332 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMC6-FAM104A TMC6 chr17 76124693 - FAM104A chr17 71205907 - Exonic hg19 BRCA TCGA-EW-A1PA-01A 11 3 5'UTR-CDS Intra-chr q25.3 q25.1 Seq+ 74333 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMC6-TK1 TMC6 chr17 76124693 - TK1 chr17 76171699 - Exonic hg19 OV TCGA-61-1917-01A 2 17 5'UTR-CDS Intra-chr q25.3 q25.3 Seq+ 74334 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMC6-UACA TMC6 chr17 76118686 - UACA chr15 70970545 - Exonic hg19 PRAD TCGA-KK-A8ID-01A 6 12 In-Frame Inter-chr q25.3 q23 Seq+ 74335 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMCC1-ACTR10 TMCC1 chr3 129513167 - ACTR10 chr14 58669573 + Exonic hg19 BRCA TCGA-AR-A0TU-01A 12 22 5'UTR-CDS Inter-chr q22.1 q23.1 Seq+ 74336 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMCC1-ALDH1L1 TMCC1 chr3 129546646 - ALDH1L1 chr3 125879845 - Exonic hg19 BRCA TCGA-AC-A2FF-01A 5 1 CDS-5'UTR Intra-chr q22.1 q21.3 Seq+ 74337 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMCC1-ARSG TMCC1 chr3 129513167 - ARSG chr17 66364689 + Exonic hg19 BLCA TCGA-DK-A2I6-01A 7 6 5'UTR-CDS Inter-chr q22.1 q24.2 74338 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMCC1-LSAMP TMCC1 chr3 129546646 - LSAMP chr3 115805403 - Exonic hg19 LUSC TCGA-39-5019-01A 5 5 Out-of-frame Intra-chr q22.1 q13.31 Tumor suppressor gene 74339 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMCC1-QSOX2 TMCC1 chr3 129546646 - QSOX2 chr9 139116755 - Exonic hg19 LUSC TCGA-NC-A5HN-01A 8 4 In-Frame Inter-chr q22.1 q34.3 Seq+ 74340 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMCC2-HMCN1 TMCC2 chr1 205197899 - HMCN1 chr1 185931650 + Exonic hg19 LGG TCGA-DU-6542-01A 2 1 Out-of-frame Intra-chr q32.1 q25.3 74341 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMCC2-MNAT1 TMCC2 chr1 205211172 - MNAT1 chr14 61262935 + Exonic hg19 LGG TCGA-TM-A7C3-01A 55 17 Out-of-frame Inter-chr q32.1 q23.1 Seq+ 74342 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMCC2-NBEA TMCC2 chr1 205211172 - NBEA chr13 35864526 + Exonic hg19 PCPG TCGA-QT-A5XO-01A 5 1 Out-of-frame Inter-chr q32.1 q13.3 74343 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMCC3-TRHDE TMCC3 chr12 95044129 - TRHDE chr12 72680461 + Exonic hg19 SARC TCGA-DX-AB2S-01A 5 1 Out-of-frame Intra-chr q22 q21.1 74344 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMCO3-ATP11A TMCO3 chr13 114193822 - ATP11A chr13 113439449 + Exonic hg19 SARC TCGA-KF-A41W-01A 62 16 Out-of-frame Intra-chr q34 q34 Seq+ 74345 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMCO3-KATNAL2 TMCO3 chr13 114193822 - KATNAL2 chr18 44572828 + Exonic hg19 BRCA TCGA-C8-A130-01A 9 4 Out-of-frame Inter-chr q34 q21.1 Seq+ 74346 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMCO3-PRKCZ TMCO3 chr13 114193822 - PRKCZ chr1 2100957 + Exonic hg19 SARC TCGA-KF-A41W-01A 3 5 Out-of-frame Inter-chr q34 p36.33 74347 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMCO3-SPACA7 TMCO3 chr13 114164739 - SPACA7 chr13 113047335 + Exonic hg19 LUSC TCGA-98-A53C-01A 28 14 In-Frame Intra-chr q34 Seq+ 74348 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMCO4-C1orf196 TMCO4 chr1 20073656 - C1orf196 chr1 14506930 + Exonic hg19 LUAD TCGA-35-3615-01A 17 4 Out-of-frame Intra-chr p36.13 74349 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMCO4-ERRFI1 TMCO4 chr1 20082127 - ERRFI1 chr1 8075752 - Exonic hg19 PRAD TCGA-HC-7213-01A 2 2 CDS-5'UTR Intra-chr p36.13 p36.23 Tumor suppressor gene Seq+ 74350 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMCO4-PLA2G2A TMCO4 chr1 20027261 - PLA2G2A chr1 20305372 - Exonic hg19 BRCA TCGA-AR-A1AQ-01A 2 1 CDS-5'UTR Intra-chr p36.13 p36.13 Tumor suppressor gene 74351 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMCO6-C5orf32 TMCO6 chr5 140021365 - C5orf32 chr5 139622890 + Exonic hg19 LIHC TCGA-CC-5263-01A 130 92 Out-of-frame Intra-chr q31.3 74352 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMCO7-CDH1 TMCO7 chr16 68901123 - CDH1 chr16 68855904 + Exonic hg19 BRCA TCGA-A7-A13D-01A 10 6 In-Frame Intra-chr q22.1 Oncogene Tumor suppressor gene 74353 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMCO7-CDH1 TMCO7 chr16 68877614 - CDH1 chr16 68772200 + Exonic hg19 SKCM TCGA-BF-A5EO-01A 3 3 Out-of-frame Intra-chr q22.1 Oncogene Tumor suppressor gene 74354 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMCO7-CFDP1 TMCO7 chr16 68877614 - CFDP1 chr16 75339080 - Exonic hg19 SKCM TCGA-GF-A6C8-06A 60 28 Out-of-frame Intra-chr q23.1 74355 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMCO7-FGF3 TMCO7 chr16 68964198 - FGF3 chr11 69631191 - Exonic hg19 BLCA TCGA-DK-A6AV-01A 4 2 In-Frame Inter-chr q13.3 74356 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMCO7-NAA15 TMCO7 chr16 68941478 - NAA15 chr4 140307287 + Exonic hg19 CESC TCGA-C5-A3HD-01B 3 1 Out-of-frame Inter-chr q31.1 74357 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMED10-PSMD11 TMED10 chr14 75614367 - PSMD11 chr17 30773963 + Exonic hg19 PRAD TCGA-YL-A8HM-01A 2 7 Out-of-frame Inter-chr q24.3 q11.2 Seq+ 74358 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMED10-TTLL5 TMED10 chr14 75643058 - TTLL5 chr14 76286350 + Exonic hg19 HNSC TCGA-CV-6961-01A 133 65 In-Frame Intra-chr q24.3 q24.3 Seq+ 74359 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMED5-ADORA3 TMED5 chr1 93645611 - ADORA3 chr1 112028462 - Exonic hg19 LUAD TCGA-50-5066-01A 3 2 Out-of-frame Intra-chr p22.1 p13.2 Seq+ 74360 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMED5-HFM1 TMED5 chr1 93645611 - HFM1 chr1 91818709 - Exonic hg19 BRCA TCGA-A2-A1FX-01A 9 7 Out-of-frame Intra-chr p22.1 p22.2 Seq+ 74361 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEFF2-RLIM TMEFF2 chr2 193044394 - RLIM chrX 73815835 - Exonic hg19 PRAD TCGA-ZG-A9NI-01A 3 3 CDS-5'UTR Inter-chr q32.3 Tumor suppressor gene q13.2 Seq+ 74362 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM104-AC011497.1 TMEM104 chr17 72773514 - AC011497.1 chr19 42989248 + Exonic hg19 PRAD TCGA-HC-8216-01A 4 4 Out-of-frame Inter-chr q25.1 q13.2 74363 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM104-DNAI2 TMEM104 chr17 72791771 - DNAI2 chr17 72310260 + Exonic hg19 BRCA TCGA-EW-A1PA-01A 48 52 In-Frame Intra-chr q25.1 q25.1 Seq+ 74364 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM104-LIN52 TMEM104 chr17 72773514 - LIN52 chr14 74557935 + Exonic hg19 PRAD TCGA-EJ-7318-01B 13 14 Out-of-frame Inter-chr q25.1 q24.3 Seq+ 74365 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM104-PCYT2 TMEM104 chr17 72781742 - PCYT2 chr17 79867478 - Exonic hg19 LUSC TCGA-98-A53A-01A 42 15 In-Frame Intra-chr q25.1 q25.3 Seq+ 74366 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM104-RAB37 TMEM104 chr17 72773514 - RAB37 chr17 72736907 + Exonic hg19 LUAD TCGA-05-4420-01A 2 4 In-Frame Intra-chr q25.1 q25.1 Seq+ 74367 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM104-SLC9A3R1 TMEM104 chr17 72773514 - SLC9A3R1 chr17 72758151 + Exonic hg19 UCEC TCGA-EO-A3AS-01A 8 15 In-Frame Intra-chr q25.1 q25.1 Tumor suppressor gene Seq+ 74368 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM106A-NMT1 TMEM106A chr17 41365910 - NMT1 chr17 43173562 + Exonic hg19 SKCM TCGA-ER-A19T-01A 2 1 Out-of-frame Intra-chr q21.31 q21.31 74369 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM107-WRAP53 TMEM107 chr17 8079518 - WRAP53 chr17 7604059 + Exonic hg19 LUAD TCGA-50-6673-01A 33 36 In-Frame Intra-chr p13.1 p13.1 Seq+ 74370 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM108-GAP43 TMEM108 chr3 132948195 - GAP43 chr3 115394860 + Exonic hg19 LUAD TCGA-55-6985-01A 2 1 Out-of-frame Intra-chr q22.1 q13.31 74371 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM11-UBAP1 TMEM11 chr17 21117404 - UBAP1 chr9 34220906 + Exonic hg19 HNSC TCGA-DQ-5629-01A 10 11 Out-of-frame Inter-chr p11.2 p13.3 Seq+ 74372 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM110-RFT1 TMEM110 chr3 52931307 - RFT1 chr3 53157856 - Exonic hg19 LIHC TCGA-DD-A73F-01A 2 1 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 74373 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM111-RHOA TMEM111 chr3 10012266 - RHOA chr3 49400059 - Exonic hg19 READ TCGA-EI-6510-01A 269 226 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene Seq+ 74374 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM117-COL25A1 TMEM117 chr12 44338145 - COL25A1 chr4 109862593 - Exonic hg19 SKCM TCGA-EE-A20I-06A 6 1 Out-of-frame Inter-chr q12 q25 74375 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM117-DYNC1LI2 TMEM117 chr12 44238731 - DYNC1LI2 chr16 66764126 - Exonic hg19 SKCM TCGA-ER-A197-06A 3 1 Out-of-frame Inter-chr q12 q22.1 74376 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM117-KCNC2 TMEM117 chr12 44238731 - KCNC2 chr12 75445097 - Exonic hg19 SKCM TCGA-D3-A51H-06A 109 79 Out-of-frame Intra-chr q12 q21.1 Seq+ 74377 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM117-KIF16B TMEM117 chr12 44537427 - KIF16B chr20 16293063 - Exonic hg19 HNSC TCGA-CQ-7072-01A 18 16 In-Frame Inter-chr q12 p12.1 Seq+ 74378 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM117-MCCC1 TMEM117 chr12 44693522 - MCCC1 chr3 182740342 - Exonic hg19 KIRP TCGA-G7-6793-01A 18 6 In-Frame Inter-chr q12 q27.1 Seq+ 74379 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM117-MCRS1 TMEM117 chr12 44238731 - MCRS1 chr12 49959998 - Exonic hg19 SKCM TCGA-EE-A2MS-06A 5 4 In-Frame Intra-chr q12 q13.12 Seq+ 74380 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM117-PRIM1 TMEM117 chr12 44238731 - PRIM1 chr12 57144979 - Exonic hg19 SARC TCGA-DX-A1L4-01A 8 4 In-Frame Intra-chr q12 q13.3 Seq+ 74381 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM117-RP11-366L20.2 TMEM117 chr12 44338145 - RP11-366L20.2 chr12 66260734 - Exonic hg19 SARC TCGA-MB-A8JL-01A 11 5 Out-of-frame Intra-chr q12 74382 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM117-TTC33 TMEM117 chr12 44238731 - TTC33 chr5 40716600 - Exonic hg19 LUSC TCGA-43-8116-01A 6 1 Out-of-frame Inter-chr q12 p13.1 Seq+ 74383 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM117-ZCRB1 TMEM117 chr12 44238731 - ZCRB1 chr12 42717906 - Exonic hg19 BRCA TCGA-E2-A14T-01A 18 24 CDS-5'UTR Intra-chr q12 q12 Seq+ 74384 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM120B-AVIL TMEM120B chr12 122150870 - AVIL chr12 58193703 - Exonic hg19 GBM TCGA-06-5856-01A 15 62 In-Frame Intra-chr q24.31 q14.1 Seq+ 74385 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM120B-GRIP1 TMEM120B chr12 122211419 - GRIP1 chr12 66773216 - Exonic hg19 SARC TCGA-DX-A1KW-01A 12 15 In-Frame Intra-chr q24.31 q14.3 Seq+ 74386 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM120B-UBTF TMEM120B chr12 122150870 - UBTF chr17 42295664 - Exonic hg19 PRAD TCGA-G9-6494-01A 2 2 CDS-5'UTR Inter-chr q24.31 q21.31 Seq+ 74387 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM123-CENPP TMEM123 chr11 102319543 - CENPP chr9 95373596 + Exonic hg19 BLCA TCGA-E7-A7DV-01A 60 39 Out-of-frame Inter-chr q22.2 q22.31 Seq+ 74388 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM123-CNTN5 TMEM123 chr11 102272270 - CNTN5 chr11 99426876 + Exonic hg19 BRCA TCGA-AO-A0JD-01A 6 36 CDS-5'UTR Intra-chr q22.2 q22.1 Seq+ 74389 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM123-MMP10 TMEM123 chr11 102319543 - MMP10 chr11 102650092 - Exonic hg19 UCEC TCGA-D1-A3JP-01A 8 8 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 74390 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM123-MMP20 TMEM123 chr11 102319543 - MMP20 chr11 102480761 - Exonic hg19 LUAD TCGA-35-4122-01A 7 4 In-Frame Intra-chr q22.2 q22.2 Seq+ 74391 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM123-MMP20 TMEM123 chr11 102319543 - MMP20 chr11 102464326 - Exonic hg19 COAD TCGA-CA-5254-01A 9 11 In-Frame Intra-chr q22.2 q22.2 Seq+ 74392 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM123-MMP20 TMEM123 chr11 102319543 - MMP20 chr11 102449873 - Exonic hg19 STAD TCGA-CD-8527-01A 24 366 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 74393 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM123-MMP20 TMEM123 chr11 102319543 - MMP20 chr11 102480761 - Exonic hg19 BRCA TCGA-OL-A66I-01A 8 2 In-Frame Intra-chr q22.2 q22.2 Seq+ 74394 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM123-MMP27 TMEM123 chr11 102319543 - MMP27 chr11 102563772 - Exonic hg19 BRCA TCGA-A7-A13D-01B 4 16 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 74395 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM123-MMP7 TMEM123 chr11 102319543 - MMP7 chr11 102395795 - Exonic hg19 OV TCGA-04-1348-01A 52 57 In-Frame Intra-chr q22.2 q22.2 Seq+ 74396 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM127-STAM TMEM127 chr2 96931607 - STAM chr10 17726674 + Exonic hg19 BLCA TCGA-GD-A3OS-01A 47 25 5'UTR-CDS Inter-chr q11.2 Tumor suppressor gene p12.33 Seq+ 74397 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM130-KPNA7 TMEM130 chr7 98467400 - KPNA7 chr7 98790724 - Exonic hg19 BRCA TCGA-A2-A1G0-01A 2 2 In-Frame Intra-chr q22.1 74398 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM131-PLA2G6 TMEM131 chr2 98408849 - PLA2G6 chr22 38531091 - Exonic hg19 UCS TCGA-NF-A4WX-01A 25 14 Out-of-frame Inter-chr q11.2 q13.1 Seq+ 74399 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM131-RAPGEF4 TMEM131 chr2 98458278 - RAPGEF4 chr2 173855538 + Exonic hg19 LIHC TCGA-FV-A3I1-01A 2 3 In-Frame Intra-chr q11.2 q31.1 74400 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM131-SPATA16 TMEM131 chr2 98543889 - SPATA16 chr3 172766884 - Exonic hg19 LUAD TCGA-05-4417-01A 13 17 In-Frame Inter-chr q11.2 q26.31 Seq+ 74401 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM131-TGFBRAP1 TMEM131 chr2 98475767 - TGFBRAP1 chr2 105897180 - Exonic hg19 BRCA TCGA-EW-A1PC-01B 4 1 Out-of-frame Intra-chr q11.2 q12.2 74402 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM132B-PPAPDC1A TMEM132B chr12 126068540 - PPAPDC1A chr10 122263330 + Exonic hg19 STAD TCGA-BR-8060-01A 2 10 Out-of-frame Inter-chr q24.31 74403 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM132D-GALNT9 TMEM132D chr12 130015604 - GALNT9 chr12 132824580 - Exonic hg19 LGG TCGA-DU-8167-01A 10 3 In-Frame Intra-chr q24.33 q24.33 Seq+ 74404 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM132D-PAH TMEM132D chr12 129694065 - PAH chr12 103306676 - Exonic hg19 PRAD TCGA-HC-7736-01A 3 1 In-Frame Intra-chr q24.33 q23.2 74405 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM132D-RALGAPA2 TMEM132D chr12 130015604 - RALGAPA2 chr20 20392792 - Exonic hg19 LUAD TCGA-55-8620-01A 3 2 In-Frame Inter-chr q24.33 p11.23 Seq+ 74406 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM132E-GPATCH8 TMEM132E chr17 32908162 - GPATCH8 chr17 42501860 - Exonic hg19 BRCA TCGA-BH-A0B7-01A 9 5 Out-of-frame Intra-chr q12 q21.31 Seq+ 74407 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM135-ALDH3B2 TMEM135 chr11 86749228 - ALDH3B2 chr11 67435106 - Exonic hg19 BRCA TCGA-A8-A09C-01A 202 148 5'UTR-5'UTR Intra-chr q14.2 q13.2 Seq+ 74408 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM135-ARHGEF26 TMEM135 chr11 86802437 - ARHGEF26 chr3 153905474 + Exonic hg19 TGCT TCGA-2G-AALX-01A 4 1 Out-of-frame Inter-chr q14.2 74409 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM135-C11orf67 TMEM135 chr11 86802437 - C11orf67 chr11 77553525 + Exonic hg19 BRCA TCGA-A2-A0D4-01A 17 10 5'UTR-5'UTR Intra-chr q14.2 Seq+ 74410 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM135-C11orf67 TMEM135 chr11 86802437 - C11orf67 chr11 77552065 + Exonic hg19 BRCA TCGA-AN-A0FV-01A 845 343 Out-of-frame Intra-chr q14.2 Seq+ 74411 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM135-CHEK1 TMEM135 chr11 86802437 - CHEK1 chr11 125545823 + Exonic hg19 BRCA TCGA-OL-A66P-01A 6 26 CDS-3'UTR Intra-chr q14.2 q24.2 Oncogene Tumor suppressor gene Seq+ 74412 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM135-CLMP TMEM135 chr11 86802437 - CLMP chr11 122955421 - Exonic hg19 BRCA TCGA-A8-A06Z-01A 26 16 In-Frame Intra-chr q14.2 q24.1 Seq+ 74413 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM135-FGD5 TMEM135 chr11 86947726 - FGD5 chr3 14922079 + Exonic hg19 BLCA TCGA-DK-AA75-01A 2 4 Out-of-frame Inter-chr q14.2 p25.1 Seq+ 74414 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM135-GPD1L TMEM135 chr11 86749228 - GPD1L chr3 32169568 + Exonic hg19 LGG TCGA-FG-5963-01A 5 10 Out-of-frame Inter-chr q14.2 p22.3 Seq+ 74415 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM135-GPD1L TMEM135 chr11 86749228 - GPD1L chr3 32169568 + Exonic hg19 LGG TCGA-FG-5963-02A 9 8 Out-of-frame Inter-chr q14.2 p22.3 Seq+ 74416 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM135-GRM5 TMEM135 chr11 87006865 - GRM5 chr11 88242672 - Exonic hg19 PRAD TCGA-EJ-7115-01A 2 1 In-Frame Intra-chr q14.2 q14.3 74417 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM135-HK1 TMEM135 chr11 86868448 - HK1 chr10 71158351 + Exonic hg19 SARC TCGA-DX-A6Z0-01A 2 6 Out-of-frame Inter-chr q14.2 q22.1 Seq+ 74418 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM14C-PAK1IP1 TMEM14C chr6 10725270 - PAK1IP1 chr6 10709186 + Exonic hg19 BRCA TCGA-EW-A3U0-01A 90 32 Out-of-frame Intra-chr p24.2 p24.2 Seq+ 74419 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM150C-SCD5 TMEM150C chr4 83483059 - SCD5 chr4 83626566 - Exonic hg19 LGG TCGA-HT-8564-01A 24 23 5'UTR-CDS Intra-chr q21.22 q21.22 Seq+ 74420 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM159-DNAH3 TMEM159 chr16 21185469 - DNAH3 chr16 21074004 - Exonic hg19 BRCA TCGA-AR-A0TX-01A 47 21 In-Frame Intra-chr p12.3 Seq+ 74421 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM159-NDUFAB1 TMEM159 chr16 21172599 - NDUFAB1 chr16 23598640 - Exonic hg19 SARC TCGA-DX-AB3A-01A 13 5 In-Frame Intra-chr p12.2 Seq+ 74422 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM161A-TIMM44 TMEM161A chr19 19240965 - TIMM44 chr19 8000030 - Exonic hg19 SARC TCGA-DX-A8BL-01A 3 2 Out-of-frame Intra-chr p13.11 p13.2 Seq+ 74423 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM161B-CTNND2 TMEM161B chr5 87536630 - CTNND2 chr5 11117679 - Exonic hg19 SKCM TCGA-D3-A51N-06A 11 4 In-Frame Intra-chr q14.3 p15.2 Seq+ 74424 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM161B-FAM81B TMEM161B chr5 87524262 - FAM81B chr5 94749651 + Exonic hg19 LUAD TCGA-97-8547-01A 10 13 In-Frame Intra-chr q14.3 q15 Seq+ 74425 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM167A-ABLIM3 TMEM167A chr5 82357696 - ABLIM3 chr5 148596522 + Exonic hg19 SKCM TCGA-EB-A5KH-06A 3 5 Out-of-frame Intra-chr q14.2 q32 Seq+ 74426 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM167A-PAM TMEM167A chr5 82357696 - PAM chr5 102295579 + Exonic hg19 SKCM TCGA-EB-A5KH-06A 11 9 Out-of-frame Intra-chr q14.2 q21.1 Seq+ 74427 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM167B-LYPLA1 TMEM167B chr1 109635643 - LYPLA1 chr8 54967693 - Exonic hg19 SARC TCGA-3B-A9HS-01A 10 19 In-Frame Inter-chr p13.3 q11.23 Seq+ 74428 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM170A-NUP93 TMEM170A chr16 75498366 - NUP93 chr16 56839416 + Exonic hg19 COAD TCGA-CM-5349-01A 20 9 Out-of-frame Intra-chr q23.1 q13 Seq+ 74429 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM170B-RP4-761I2.2 TMEM170B chr6 11538607 - RP4-761I2.2 chr6 11134636 + Exonic hg19 PAAD TCGA-LB-A7SX-01A 7 6 Out-of-frame Intra-chr p24.2 74430 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM175-ATP9A TMEM175 chr4 949678 - ATP9A chr20 50217886 - Exonic hg19 UCEC TCGA-D1-A3JP-01A 4 7 Out-of-frame Inter-chr p16.3 q13.2 Seq+ 74431 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM176B-ARFGEF2 TMEM176B chr7 150488375 - ARFGEF2 chr20 47615777 + Exonic hg19 LIHC TCGA-DD-A11D-01A 2 7 Out-of-frame Inter-chr q36.1 q13.13 74432 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM179B-RSF1 TMEM179B chr11 62554999 - RSF1 chr11 77413540 - Exonic hg19 STAD TCGA-VQ-A8PU-01A 3 29 Out-of-frame Intra-chr q12.3 q14.1 Seq+ 74433 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM179B-SCGB1D1 TMEM179B chr11 62554999 - SCGB1D1 chr11 61959528 + Exonic hg19 OV TCGA-24-2026-01A 4 9 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 74434 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM180-GBF1 TMEM180 chr10 104233769 - GBF1 chr10 104111013 + Exonic hg19 STAD TCGA-VQ-A91K-01A 2 8 In-Frame Intra-chr q24.32 74435 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM181-HMGCLL1 TMEM181 chr6 159029782 - HMGCLL1 chr6 55304357 - Exonic hg19 BRCA TCGA-A8-A08R-01A 13 17 Out-of-frame Intra-chr q25.3 p12.1 Seq+ 74436 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM182-ADAMTS12 TMEM182 chr2 103414459 - ADAMTS12 chr5 33751653 - Exonic hg19 LUAD TCGA-93-8067-01A 2 1 Out-of-frame Inter-chr q12.1 p13.2 74437 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM182-ARHGAP15 TMEM182 chr2 103353472 - ARHGAP15 chr2 144460988 + Exonic hg19 PRAD TCGA-XJ-A83G-01A 2 1 5'UTR-CDS Intra-chr q12.1 q22.2 74438 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM182-IL18R1 TMEM182 chr2 103380886 - IL18R1 chr2 102979093 + Exonic hg19 STAD TCGA-VQ-A925-01A 2 8 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 74439 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM182-SLC9A2 TMEM182 chr2 103380886 - SLC9A2 chr2 103274023 + Exonic hg19 BRCA TCGA-A8-A07C-01A 11 4 In-Frame Intra-chr q12.1 q12.1 Seq+ 74440 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM184B-CSNK1E TMEM184B chr22 38620792 - CSNK1E chr22 38699253 - Exonic hg19 READ TCGA-AF-5654-01A 2 4 In-Frame Intra-chr q13.1 q13.1 Seq+ 74441 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM184B-CSNK1E TMEM184B chr22 38668890 - CSNK1E chr22 38699253 - Exonic hg19 CESC TCGA-DS-A1OC-01A 2 6 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 74442 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM184B-DNAH14 TMEM184B chr22 38668890 - DNAH14 chr1 225562390 + Exonic hg19 UCEC TCGA-AJ-A3BF-01A 11 6 5'UTR-CDS Inter-chr q13.1 q42.12 Seq+ 74443 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM184B-RNF25 TMEM184B chr22 38626675 - RNF25 chr2 219533402 - Exonic hg19 BRCA TCGA-A7-A5ZV-01A 2 1 Out-of-frame Inter-chr q13.1 q35 74444 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM184B-SUN2 TMEM184B chr22 38668890 - SUN2 chr22 39141816 - Exonic hg19 UCEC TCGA-B5-A0JN-01A 5 2 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 74445 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM188-ANK1 TMEM188 chr16 50060378 - ANK1 chr8 41615655 - Exonic hg19 BRCA TCGA-A8-A086-01A 3 4 Out-of-frame Inter-chr p11.21 74446 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM19-TSPAN8 TMEM19 chr12 72083484 - TSPAN8 chr12 71551567 - Exonic hg19 GBM TCGA-41-2571-01A 4 5 CDS-5'UTR Intra-chr q21.1 q21.1 Seq+ 74447 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM2-HMCN1 TMEM2 chr9 74309425 - HMCN1 chr1 185878469 + Exonic hg19 SARC TCGA-DX-A48N-01A 8 7 In-Frame Inter-chr q21.13 q25.3 Seq+ 74448 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM200A-FYN TMEM200A chr6 130687669 - FYN chr6 112101838 - Exonic hg19 UVM TCGA-VD-A8KJ-01A 18 28 5'UTR-5'UTR Intra-chr q23.1 q21 TK:Src Seq+ 74449 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM201-SPSB1 TMEM201 chr1 9662330 - SPSB1 chr1 9415802 + Exonic hg19 BLCA TCGA-DK-A1AC-01A 7 1 CDS-5'UTR Intra-chr p36.22 p36.22 Seq+ 74450 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM206-RCOR3 TMEM206 chr1 212583767 - RCOR3 chr1 211486766 + Exonic hg19 BRCA TCGA-D8-A13Z-01A 7 5 In-Frame Intra-chr q32.3 q32.2 Seq+ 74451 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM213-ARFGEF2 TMEM213 chr7 138491504 - ARFGEF2 chr20 47615777 + Exonic hg19 KICH TCGA-KN-8423-01A 2 11 Out-of-frame Inter-chr q34 q13.13 74452 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM216-KCNG3 TMEM216 chr11 61160151 - KCNG3 chr2 42671719 - Exonic hg19 COAD TCGA-D5-6534-01A 7 5 5'UTR-CDS Inter-chr q12.2 p21 Seq+ 74453 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM223-SLC22A8 TMEM223 chr11 62559151 - SLC22A8 chr11 62761350 - Exonic hg19 LIHC TCGA-BW-A5NO-01A 3 2 In-Frame Intra-chr q12.3 q12.3 Seq+ 74454 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM223-STX5 TMEM223 chr11 62559151 - STX5 chr11 62575100 - Exonic hg19 BRCA TCGA-AN-A0FL-01A 66 44 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 74455 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM232-ANKRA2 TMEM232 chr5 110002929 - ANKRA2 chr5 72858810 - Exonic hg19 LUSC TCGA-60-2712-01A 3 2 CDS-5'UTR Intra-chr q22.1 q13.2 74456 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM25-CD3G TMEM25 chr11 118404844 - CD3G chr11 118220458 + Exonic hg19 LUSC TCGA-L3-A524-01A 33 17 In-Frame Intra-chr q23.3 q23.3 Seq+ 74457 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM25-CDH26 TMEM25 chr11 118405070 - CDH26 chr20 58567433 + Exonic hg19 BRCA TCGA-AN-A0XU-01A 4 1 Out-of-frame Inter-chr q23.3 q13.33 74458 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM30A-FILIP1 TMEM30A chr6 75994118 - FILIP1 chr6 76124694 - Exonic hg19 OV TCGA-13-A5FT-01A 24 62 CDS-5'UTR Intra-chr q14.1 q14.1 Seq+ 74459 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM30A-FILIP1 TMEM30A chr6 75994118 - FILIP1 chr6 76005666 - Exonic hg19 LUSC TCGA-22-5491-01A 30 4 CDS-3'UTR Intra-chr q14.1 q14.1 Seq+ 74460 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM35-SLC25A43 TMEM35 chrX 100334111 - SLC25A43 chrX 118585972 + Exonic hg19 SARC TCGA-3B-A9HV-01A 4 4 In-Frame Intra-chr q24 74461 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM38B-BCO2 TMEM38B chr9 108510471 - BCO2 chr11 112064197 + Exonic hg19 HNSC TCGA-P3-A5Q6-01A 9 2 Out-of-frame Inter-chr q31.2 q23.1 74462 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM39A-BBX TMEM39A chr3 119180809 - BBX chr3 107451803 + Exonic hg19 LUAD TCGA-99-8032-01A 4 5 Out-of-frame Intra-chr q13.33 q13.12 Transcription factor Seq+ 74463 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM39A-C3orf15 TMEM39A chr3 119171294 - C3orf15 chr3 119434409 + Exonic hg19 PRAD TCGA-KK-A7AV-01A 3 2 Out-of-frame Intra-chr q13.33 74464 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM39A-EPHA6 TMEM39A chr3 119171294 - EPHA6 chr3 96706174 + Exonic hg19 PRAD TCGA-EJ-5505-01A 12 23 In-Frame Intra-chr q13.33 q11.2 Seq+ 74465 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM39B-C1orf94 TMEM39B chr1 32542919 - C1orf94 chr1 34662826 + Exonic hg19 LUAD TCGA-71-8520-01A 19 11 In-Frame Intra-chr p35.2 p35.1 Seq+ 74466 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM41B-TEKT1 TMEM41B chr11 9321131 - TEKT1 chr17 6719281 - Exonic hg19 LUAD TCGA-50-8460-01A 7 4 In-Frame Inter-chr p15.4 p13.1 Seq+ 74467 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM45A-C3orf26 TMEM45A chr3 100211772 - C3orf26 chr3 99879274 + Exonic hg19 BRCA TCGA-A7-A5ZV-01A 132 82 5'UTR-CDS Intra-chr q12.2 74468 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM45A-LNP1 TMEM45A chr3 100238452 - LNP1 chr3 100148541 + Exonic hg19 LUSC TCGA-22-1005-01A 47 29 5'UTR-5'UTR Intra-chr q12.2 q12.2 Seq+ 74469 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM48-SSBP3 TMEM48 chr1 54252831 - SSBP3 chr1 54747200 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 2 4 In-Frame Intra-chr p32.3 Seq+ 74470 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM48-YIPF1 TMEM48 chr1 54291471 - YIPF1 chr1 54325826 - Exonic hg19 BRCA TCGA-PL-A8LZ-01A 33 25 In-Frame Intra-chr p32.3 Seq+ 74471 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM5-PTDSS1 TMEM5 chr12 64178852 - PTDSS1 chr8 97285527 + Exonic hg19 SARC TCGA-3B-A9HO-01A 10 4 In-Frame Inter-chr q14.2 q22.1 Seq+ 74472 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM50B-GART TMEM50B chr21 34852145 - GART chr21 34883765 - Exonic hg19 LIHC TCGA-BC-A10R-01A 7 2 5'UTR-CDS Intra-chr Seq+ 74473 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM50B-TLX2 TMEM50B chr21 34852145 - TLX2 chr2 74741124 + Exonic hg19 STAD TCGA-BR-8679-01A 2 1 5'UTR-5'UTR Inter-chr p13.1 Transcription factor 74474 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM51-KAZN TMEM51 chr1 15480450 - KAZN chr1 15370485 + Exonic hg19 HNSC TCGA-CV-7428-01A 8 9 5'UTR-CDS Intra-chr p36.21 p36.21 Seq+ 74475 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM53-EIF2B3 TMEM53 chr1 45125846 - EIF2B3 chr1 45363116 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 5 3 Out-of-frame Intra-chr p34.1 p34.1 74476 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM54-SUPT16H TMEM54 chr1 33360196 - SUPT16H chr14 21829491 - Exonic hg19 HNSC TCGA-CR-5250-01A 2 8 3'UTR-CDS Inter-chr p35.1 q11.2 74477 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM56-FNBP1L TMEM56 chr1 95639445 - FNBP1L chr1 93965025 + Exonic hg19 BRCA TCGA-D8-A1X5-01A 9 6 Out-of-frame Intra-chr p21.3 p22.1 Seq+ 74478 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM59-ARFGEF2 TMEM59 chr1 54497690 - ARFGEF2 chr20 47615777 + Exonic hg19 COAD TCGA-G4-6315-01A 2 15 Out-of-frame Inter-chr p32.3 q13.13 74479 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM59-MYBPC1 TMEM59 chr1 54497349 - MYBPC1 chr12 102008274 + Exonic hg19 PRAD TCGA-CH-5789-01A 2 1 3'UTR-CDS Inter-chr p32.3 q23.2 74480 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM59-SSBP3 TMEM59 chr1 54502283 - SSBP3 chr1 54722859 - Exonic hg19 STAD TCGA-VQ-A91K-01A 7 167 In-Frame Intra-chr p32.3 p32.3 Seq+ 74481 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM59-SUPT16H TMEM59 chr1 54497690 - SUPT16H chr14 21829491 - Exonic hg19 LUAD TCGA-MP-A5C7-01A 2 16 Out-of-frame Inter-chr p32.3 q11.2 74482 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM60-HIP1 TMEM60 chr7 77427571 - HIP1 chr7 75178299 - Exonic hg19 ESCA TCGA-L5-A4OU-01A 2 10 5'UTR-CDS Intra-chr q11.23 q11.23 Seq+ 74483 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM63B-KIAA0494 TMEM63B chr6 44095415 - KIAA0494 chr1 47157609 - Exonic hg19 UCEC TCGA-AJ-A3QS-01A 2 4 5'UTR-CDS Inter-chr p21.1 74484 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM63B-MRPL14 TMEM63B chr6 44122182 - MRPL14 chr6 44084366 - Exonic hg19 KIRC TCGA-B0-4836-01A 14 9 CDS-5'UTR Intra-chr p21.1 p21.1 Seq+ 74485 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM63B-POLR1C TMEM63B chr6 44108835 - POLR1C chr6 43488013 + Exonic hg19 LIHC TCGA-MI-A75I-01A 2 2 Out-of-frame Intra-chr p21.1 p21.1 74486 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM63B-RSPH9 TMEM63B chr6 44104176 - RSPH9 chr6 43623299 + Exonic hg19 STAD TCGA-BR-4366-01A 4 5 In-Frame Intra-chr p21.1 p21.1 74487 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM64-HHLA1 TMEM64 chr8 91657339 - HHLA1 chr8 133078215 - Exonic hg19 LUAD TCGA-62-A46S-01A 9 14 Out-of-frame Intra-chr q21.3 q24.22 Seq+ 74488 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM64-NECAB1 TMEM64 chr8 91657339 - NECAB1 chr8 91813919 + Exonic hg19 BRCA TCGA-A2-A0CZ-01A 3 3 In-Frame Intra-chr q21.3 q21.3 74489 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM64-OC90 TMEM64 chr8 91657339 - OC90 chr8 133058130 - Exonic hg19 LUAD TCGA-62-A46S-01A 22 8 Out-of-frame Intra-chr q21.3 q24.22 Seq+ 74490 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM65-EXT1 TMEM65 chr8 125384095 - EXT1 chr8 118849440 - Exonic hg19 LUSC TCGA-85-8664-01A 3 3 Out-of-frame Intra-chr q24.13 q24.11 Oncogene Tumor suppressor gene Seq+ 74491 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM66-TNKS TMEM66 chr8 29940363 - TNKS chr8 9537461 + Exonic hg19 PRAD TCGA-KK-A8I5-01A 2 6 In-Frame Intra-chr p23.1 Seq+ 74492 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM67-STMN2 TMEM67 chr8 94815912 - STMN2 chr8 80577050 + Exonic hg19 LUAD TCGA-78-7145-01A 4 1 In-Frame Intra-chr q22.1 q21.13 Seq+ 74493 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM68-DPYS TMEM68 chr8 56656040 - DPYS chr8 105436617 - Exonic hg19 PRAD TCGA-FC-A4JI-01A 203 197 Out-of-frame Intra-chr q12.1 q22.3 Seq+ 74494 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM68-ZNF821 TMEM68 chr8 56685828 - ZNF821 chr16 71913926 - Exonic hg19 PRAD TCGA-KK-A8IM-01A 7 10 5'UTR-5'UTR Inter-chr q12.1 q22.2 Transcription factor Seq+ 74495 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM87A-PTPRN2 TMEM87A chr15 42565453 - PTPRN2 chr7 158109624 - Exonic hg19 LUSC TCGA-66-2758-01A 4 2 Out-of-frame Inter-chr q15.1 q36.3 74496 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM87B-IL1RN TMEM87B chr2 112847295 - IL1RN chr2 113868693 + Exonic hg19 STAD TCGA-BR-4357-01A 6 4 Out-of-frame Intra-chr q13 q14.1 74497 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM87B-MERTK TMEM87B chr2 112813333 - MERTK chr2 112751828 + Exonic hg19 LUAD TCGA-50-5072-01A 4 2 In-Frame Intra-chr q13 q13 Seq+ 74498 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM87B-MERTK TMEM87B chr2 112813333 - MERTK chr2 112751828 + Exonic hg19 LUSC TCGA-85-A511-01A 18 8 In-Frame Intra-chr q13 q13 Seq+ 74499 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM87B-MERTK TMEM87B chr2 112813333 - MERTK chr2 112751828 + Exonic hg19 BRCA TCGA-A2-A0D0-01A 13 12 In-Frame Intra-chr q13 q13 Seq+ 74500 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM87B-MERTK TMEM87B chr2 112813333 - MERTK chr2 112785928 + Exonic hg19 BRCA TCGA-AO-A0J2-01A 6 4 Out-of-frame Intra-chr q13 q13 Seq+ 74501 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM87B-MERTK TMEM87B chr2 112813333 - MERTK chr2 112751828 + Exonic hg19 CESC TCGA-C5-A7X5-01A 126 95 In-Frame Intra-chr q13 q13 Seq+ 74502 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM87B-MERTK TMEM87B chr2 112817614 - MERTK chr2 112785928 + Exonic hg19 ACC TCGA-OR-A5K5-01A 19 6 Out-of-frame Intra-chr q13 q13 Seq+ 74503 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM87B-MERTK TMEM87B chr2 112834859 - MERTK chr2 112765960 + Exonic hg19 BLCA TCGA-XF-A9SU-01A 11 13 In-Frame Intra-chr q13 q13 Seq+ 74504 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM8A-CSDA TMEM8A chr16 431701 - CSDA chr12 10856747 - Exonic hg19 PRAD TCGA-XQ-A8TA-01A 12 6 Out-of-frame Inter-chr p13.3 Seq+ 74505 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM9-MYO5B TMEM9 chr1 201112948 - MYO5B chr18 47421544 - Exonic hg19 LUAD TCGA-91-6848-01A 25 10 In-Frame Inter-chr q32.1 q21.1 Seq+ 74506 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM91-TGFB1 TMEM91 chr19 41870000 - TGFB1 chr19 41838186 - Exonic hg19 LGG TCGA-CS-4944-01A 4 7 5'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 74507 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM93-CEACAM19 TMEM93 chr17 3572193 - CEACAM19 chr19 45185839 + Exonic hg19 OV TCGA-30-1866-01A 25 4 5'UTR-CDS Inter-chr q13.31 Seq+ 74508 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM97-BLMH TMEM97 chr17 26646391 - BLMH chr17 28601215 - Exonic hg19 PRAD TCGA-HC-7742-01A 19 15 In-Frame Intra-chr q11.2 q11.2 Seq+ 74509 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM98-GPATCH8 TMEM98 chr17 31261342 - GPATCH8 chr17 42483419 - Exonic hg19 LUSC TCGA-66-2800-01A 11 4 In-Frame Intra-chr q11.2 q21.31 Seq+ 74510 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM99-FBXO47 TMEM99 chr17 38989451 - FBXO47 chr17 37111186 - Exonic hg19 BLCA TCGA-FD-A43P-01A 3 1 5'UTR-CDS Intra-chr q21.2 q12 Seq+ 74511 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM99-KRT28 TMEM99 chr17 38975460 - KRT28 chr17 38955251 - Exonic hg19 STAD TCGA-CG-4466-01A 13 25 5'UTR-CDS Intra-chr q21.2 q21.2 Seq+ 74512 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMEM9B-PSIP1 TMEM9B chr11 8983639 - PSIP1 chr9 15490122 - Exonic hg19 SARC TCGA-VT-A80G-01A 33 15 In-Frame Inter-chr p15.4 p22.3 Oncogene Seq+ 74513 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMF1-FRMD4B TMF1 chr3 69075147 - FRMD4B chr3 69362668 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 6 3 In-Frame Intra-chr p14.1 Transcription factor p14.1 Seq+ 74514 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMLHE-CDK12 TMLHE chrX 154842453 - CDK12 chr17 37646810 + Exonic hg19 UCEC TCGA-KP-A3W4-01A 2 1 5'UTR-CDS Inter-chr q28 q12 Oncogene 74515 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMLHE-NEDD9 TMLHE chrX 154743647 - NEDD9 chr6 11193925 - Exonic hg19 HNSC TCGA-BB-7861-01A 7 5 Out-of-frame Inter-chr q28 p24.2 Seq+ 74516 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMLHE-VBP1 TMLHE chrX 154754117 - VBP1 chrX 154437152 + Exonic hg19 ACC TCGA-OR-A5JO-01A 8 3 CDS-5'UTR Intra-chr q28 q28 Seq+ 74517 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMOD1-TDRD7 TMOD1 chr9 100264085 - TDRD7 chr9 100234575 + Exonic hg19 UCEC TCGA-A5-A3LP-01A 2 6 5'UTR-CDS Intra-chr q22.33 q22.33 Seq+ 74518 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMOD2-C15orf59 TMOD2 chr15 52075025 - C15orf59 chr15 74032983 - Exonic hg19 LGG TCGA-DU-A7TC-01A 4 3 In-Frame Intra-chr q21.2 q24.1 Seq+ 74519 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMOD3-EIF4E2 TMOD3 chr15 52122033 - EIF4E2 chr2 233421126 + Exonic hg19 BRCA TCGA-EW-A1P0-01A 5 3 5'UTR-CDS Inter-chr q21.2 q37.1 Seq+ 74520 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMOD3-SPG11 TMOD3 chr15 52122033 - SPG11 chr15 44878048 - Exonic hg19 UCS TCGA-N5-A4RN-01A 5 3 5'UTR-CDS Intra-chr q21.2 q21.1 Seq+ 74521 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMOD3-TACC3 TMOD3 chr15 52161570 - TACC3 chr4 1746245 + Exonic hg19 LGG TCGA-TM-A84B-01A 195 175 Out-of-frame Inter-chr q21.2 p16.3 Seq+ 74522 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPO-RP11-977G19.10 TMPO chr12 98931350 - RP11-977G19.10 chr12 56680429 - Exonic hg19 STAD TCGA-BR-7959-01A 14 31 Out-of-frame Intra-chr q23.1 74523 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS11D-SPINK2 TMPRSS11D chr4 68749644 - SPINK2 chr4 57677960 - Exonic hg19 HNSC TCGA-F7-7848-01A 2 3 Out-of-frame Intra-chr q13.2 q12 74524 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ARFGEF2 TMPRSS2 chr21 42837936 - ARFGEF2 chr20 47615777 + Exonic hg19 PRAD TCGA-G9-6371-01A 2 7 Out-of-frame Inter-chr q22.3 q13.13 74525 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ATF7IP TMPRSS2 chr21 42870046 - ATF7IP chr12 14613429 + Exonic hg19 PRAD TCGA-EJ-7784-01A 361 469 Out-of-frame Inter-chr q22.3 p13.1 Seq+ 74526 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-BRAF TMPRSS2 chr21 42866283 - BRAF chr7 140481493 - Exonic hg19 PRAD TCGA-FC-A6HD-01A 63 61 Out-of-frame Inter-chr q22.3 q34 TKL:RAF Oncogene Seq+ 74527 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42879877 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-EJ-5501-01A 232 140 In-Frame Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 74528 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42870046 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-EJ-7788-01A 419 116 Out-of-frame Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 74529 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42866283 - ETV1 chr7 13971374 - Exonic hg19 PRAD TCGA-HC-7818-01A 733 379 Out-of-frame Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 74530 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42879877 - ETV1 chr7 13978871 - Exonic hg19 PRAD TCGA-YL-A8SC-01A 317 164 In-Frame Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 74531 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42866283 - ETV4 chr17 41607549 - Exonic hg19 PRAD TCGA-G9-6351-01A 3 1 In-Frame Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 74532 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42879877 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-G9-6371-01A 155 9 Out-of-frame Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 74533 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42870046 - ETV4 chr17 41623036 - Exonic hg19 PRAD TCGA-HC-7077-01A 665 375 CDS-5'UTR Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 74534 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42870046 - ETV4 chr17 41623036 - Exonic hg19 PRAD TCGA-HC-7079-01A 2 2 CDS-5'UTR Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 74535 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880008 - ETV4 chr17 41623036 - Exonic hg19 PRAD TCGA-KC-A7FD-01A 293 84 5'UTR-5'UTR Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 74536 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880008 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-KK-A7AW-01A 7 1 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 74537 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880008 - ETV4 chr17 41622735 - Exonic hg19 PRAD TCGA-M7-A725-01A 120 32 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 74538 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ETV5 TMPRSS2 chr21 42861434 - ETV5 chr3 185823731 - Exonic hg19 PRAD TCGA-KK-A7AZ-01A 115 92 CDS-5'UTR Inter-chr q22.3 q27.2 Oncogene Transcription factor KB Pub Seq+ 74539 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ETV5 TMPRSS2 chr21 42866283 - ETV5 chr3 185823731 - Exonic hg19 PRAD TCGA-ZG-A9L5-01A 1074 930 CDS-5'UTR Inter-chr q22.3 q27.2 Oncogene Transcription factor KB Pub Seq+ 74540 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-GUCA2A TMPRSS2 chr21 42880008 - GUCA2A chr1 42629281 - Exonic hg19 PRAD TCGA-KC-A4BR-01A 76 35 5'UTR-CDS Inter-chr q22.3 p34.2 Seq+ 74541 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-HSF2BP TMPRSS2 chr21 42843733 - HSF2BP chr21 44949842 - Exonic hg19 HNSC TCGA-P3-A6T8-01A 85 92 In-Frame Intra-chr q22.3 q22.3 Seq+ 74542 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-INPP4B TMPRSS2 chr21 42879877 - INPP4B chr4 143191927 - Exonic hg19 PRAD TCGA-V1-A8WS-01A 33 14 Out-of-frame Inter-chr q22.3 q31.21 Tumor suppressor gene Seq+ 74543 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-MLLT3 TMPRSS2 chr21 42851099 - MLLT3 chr9 20620833 - Exonic hg19 PRAD TCGA-ZG-A9L1-01A 76 67 Out-of-frame Inter-chr q22.3 p21.3 Seq+ 74544 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-MORC3 TMPRSS2 chr21 42870046 - MORC3 chr21 37705944 + Exonic hg19 PRAD TCGA-CH-5762-01A 14 26 In-Frame Intra-chr q22.3 q22.12 Seq+ 74545 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-MRPS6 TMPRSS2 chr21 42845252 - MRPS6 chr21 35497641 + Exonic hg19 PRAD TCGA-EJ-8469-01A 469 260 Out-of-frame Intra-chr q22.3 q22.11 Seq+ 74546 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-PDE9A TMPRSS2 chr21 42866283 - PDE9A chr21 44163886 + Exonic hg19 PRAD TCGA-ZG-A9L2-01A 40 35 In-Frame Intra-chr q22.3 q22.3 Seq+ 74547 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-PHF12 TMPRSS2 chr21 42860321 - PHF12 chr17 27235899 - Exonic hg19 LIHC TCGA-G3-AAUZ-01A 3 6 In-Frame Inter-chr q22.3 q11.2 Seq+ 74548 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-SARS TMPRSS2 chr21 42860321 - SARS chr1 109766600 + Exonic hg19 PRAD TCGA-EJ-8474-01A 171 131 In-Frame Inter-chr q22.3 p13.3 Seq+ 74549 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-SETD4 TMPRSS2 chr21 42860321 - SETD4 chr21 37429502 - Exonic hg19 STAD TCGA-VQ-A8DZ-01A 2 5 In-Frame Intra-chr q22.3 q22.12 74550 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-TMEFF2 TMPRSS2 chr21 42852403 - TMEFF2 chr2 192863934 - Exonic hg19 PRAD TCGA-KK-A59Y-01A 48 29 In-Frame Inter-chr q22.3 q32.3 Tumor suppressor gene Seq+ 74551 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS6-EME1 TMPRSS6 chr22 37485618 - EME1 chr17 48455956 + Exonic hg19 BRCA TCGA-C8-A132-01A 14 14 Out-of-frame Inter-chr q12.3 Tumor suppressor gene q21.33 Seq+ 74552 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS6-MPST TMPRSS6 chr22 37491591 - MPST chr22 37420233 + Exonic hg19 LIHC TCGA-BC-A216-01A 11 13 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q12.3 Seq+ 74553 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS6-PPP6R3 TMPRSS6 chr22 37499256 - PPP6R3 chr11 68377372 + Exonic hg19 LIHC TCGA-2Y-A9GT-01A 642 560 Out-of-frame Inter-chr q12.3 Tumor suppressor gene q13.2 Seq+ 74554 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS6-PPP6R3 TMPRSS6 chr22 37499256 - PPP6R3 chr11 68377372 + Exonic hg19 LIHC TCGA-2Y-A9H2-01A 89 93 Out-of-frame Inter-chr q12.3 Tumor suppressor gene q13.2 Seq+ 74555 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMSB10-CD63 TMSB10 chr2 85133795 - CD63 chr12 56123444 - Exonic hg19 PRAD TCGA-G9-7521-01A 2 1 Out-of-frame Inter-chr p11.2 q13.2 74556 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMSB10-CFB TMSB10 chr2 85133795 - CFB chr6 31913427 + Exonic hg19 CESC TCGA-EA-A3Y4-01A 2 1 Out-of-frame Inter-chr p11.2 74557 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMSB10-CLCN3 TMSB10 chr2 85133795 - CLCN3 chr4 170623929 + Exonic hg19 LUSC TCGA-39-5011-01A 2 11 Out-of-frame Inter-chr p11.2 q33 74558 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMSB10-SNW1 TMSB10 chr2 85133795 - SNW1 chr14 78189203 - Exonic hg19 SKCM TCGA-D9-A3Z3-06A 2 17 Out-of-frame Inter-chr p11.2 q24.3 74559 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMTC1-CASC1 TMTC1 chr12 29664976 - CASC1 chr12 25264873 - Exonic hg19 LGG TCGA-DU-7007-01A 38 29 In-Frame Intra-chr p11.22 p12.1 Tumor suppressor gene Seq+ 74560 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMTC1-YEATS4 TMTC1 chr12 29709790 - YEATS4 chr12 69783927 + Exonic hg19 SARC TCGA-DX-A48N-01A 63 18 Out-of-frame Intra-chr p11.22 q15 Seq+ 74561 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMTC2-BTBD11 TMTC2 chr12 83290425 - BTBD11 chr12 108029062 + Exonic hg19 SARC TCGA-DX-A3M1-01A 10 2 Out-of-frame Intra-chr q21.31 q23.3 Seq+ 74562 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMTC2-C12orf26 TMTC2 chr12 83081448 - C12orf26 chr12 82792574 + Exonic hg19 LUAD TCGA-05-4398-01A 27 7 Out-of-frame Intra-chr q21.31 74563 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMTC2-C12orf28 TMTC2 chr12 83081448 - C12orf28 chr12 70297424 + Exonic hg19 SARC TCGA-FX-A2QS-01A 51 5 Out-of-frame Intra-chr q21.31 74564 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMTC2-GNA14 TMTC2 chr12 83290425 - GNA14 chr9 80144169 - Exonic hg19 SARC TCGA-DX-A48N-01A 261 146 In-Frame Inter-chr q21.31 q21.2 Seq+ 74565 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMTC2-HERC1 TMTC2 chr12 83081448 - HERC1 chr15 63956793 - Exonic hg19 SARC TCGA-DX-A1L4-01A 4 3 In-Frame Inter-chr q21.31 q22.31 Seq+ 74566 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMTC2-LYZ TMTC2 chr12 83379825 - LYZ chr12 69743888 + Exonic hg19 SARC TCGA-DX-A3U5-01A 64 34 Out-of-frame Intra-chr q21.31 q15 Seq+ 74567 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMTC2-PPFIA2 TMTC2 chr12 83455610 - PPFIA2 chr12 81851645 - Exonic hg19 BRCA TCGA-A8-A06Q-01A 9 5 In-Frame Intra-chr q21.31 q21.31 Seq+ 74568 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMTC2-PTPRR TMTC2 chr12 83081448 - PTPRR chr12 71286757 - Exonic hg19 SARC TCGA-DX-A1L4-01A 6 1 Out-of-frame Intra-chr q21.31 q15 74569 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMTC2-SOCS2 TMTC2 chr12 83081448 - SOCS2 chr12 93966461 + Exonic hg19 UCS TCGA-N5-A4RO-01A 9 4 CDS-5'UTR Intra-chr q21.31 q22 Seq+ 74570 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMTC3-ACSS3 TMTC3 chr12 88536264 - ACSS3 chr12 81647086 + Exonic hg19 PRAD TCGA-V1-A9O9-01A 21 29 5'UTR-CDS Intra-chr q21.32 q21.31 Seq+ 74571 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMTC3-C12orf29 TMTC3 chr12 88570096 - C12orf29 chr12 88433925 + Exonic hg19 SARC TCGA-DX-A6BF-01A 23 9 Out-of-frame Intra-chr q21.32 q21.32 Seq+ 74572 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMTC3-CEP290 TMTC3 chr12 88542281 - CEP290 chr12 88502958 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 3 4 In-Frame Intra-chr q21.32 q21.32 74573 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMTC3-CPNE4 TMTC3 chr12 88570096 - CPNE4 chr3 131759165 - Exonic hg19 PRAD TCGA-G9-A9S4-01A 9 1 Out-of-frame Inter-chr q21.32 q22.1 Seq+ 74574 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMTC3-EIF4B TMTC3 chr12 88570096 - EIF4B chr12 53410257 + Exonic hg19 SKCM TCGA-EE-A29D-06A 9 6 In-Frame Intra-chr q21.32 q13.13 74575 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMTC3-LIN7A TMTC3 chr12 88536264 - LIN7A chr12 81205462 - Exonic hg19 PRAD TCGA-CH-5792-01A 38 18 5'UTR-CDS Intra-chr q21.32 q21.31 Seq+ 74576 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMTC3-OSBPL8 TMTC3 chr12 88570096 - OSBPL8 chr12 76752591 - Exonic hg19 SARC TCGA-3B-A9HS-01A 12 2 Out-of-frame Intra-chr q21.32 q21.2 Seq+ 74577 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMTC3-PRRC2C TMTC3 chr12 88570096 - PRRC2C chr1 171560726 + Exonic hg19 SARC TCGA-WK-A8XO-01A 83 37 Out-of-frame Inter-chr q21.32 q24.3 Seq+ 74578 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMTC3-RILPL1 TMTC3 chr12 88554628 - RILPL1 chr12 123970352 - Exonic hg19 SARC TCGA-3B-A9HO-01A 39 41 Out-of-frame Intra-chr q21.32 q24.31 Seq+ 74579 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMTC3-SLC35E3 TMTC3 chr12 88536264 - SLC35E3 chr12 69152937 + Exonic hg19 SARC TCGA-DX-A3M1-01A 9 4 5'UTR-CDS Intra-chr q21.32 q15 Seq+ 74580 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMTC3-SLC6A15 TMTC3 chr12 88536264 - SLC6A15 chr12 85286087 - Exonic hg19 SARC TCGA-DX-A3M1-01A 6 1 5'UTR-5'UTR Intra-chr q21.32 q21.31 Seq+ 74581 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMTC3-THAP2 TMTC3 chr12 88570096 - THAP2 chr12 72070469 + Exonic hg19 BRCA TCGA-BH-A1EV-01A 4 1 Out-of-frame Intra-chr q21.32 q21.1 Transcription factor 74582 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMTC3-TMEM19 TMTC3 chr12 88536173 - TMEM19 chr12 72091060 + Exonic hg19 SARC TCGA-DX-A3LT-01A 2 1 5'UTR-CDS Intra-chr q21.32 q21.1 74583 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMTC4-FGF14 TMTC4 chr13 101277789 - FGF14 chr13 102527646 - Exonic hg19 BRCA TCGA-A2-A0D2-01A 4 3 Out-of-frame Intra-chr q32.3 q33.1 Seq+ 74584 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMUB1-AGAP3 TMUB1 chr7 150779262 - AGAP3 chr7 150825667 + Exonic hg19 LUSC TCGA-56-A4ZK-01A 5 6 Out-of-frame Intra-chr q36.1 q36.1 Seq+ 74585 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMX1-TRIM9 TMX1 chr14 51710689 - TRIM9 chr14 51467558 - Exonic hg19 SKCM TCGA-GN-A265-06A 15 2 In-Frame Intra-chr q22.1 q22.1 Seq+ 74586 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMX2-C11orf80 TMX2 chr11 57480279 - C11orf80 chr11 66563752 + Exonic hg19 BRCA TCGA-C8-A135-01A 25 26 In-Frame Intra-chr q12.1 q13.2 Seq+ 74587 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMX2-IFT46 TMX2 chr11 57480279 - IFT46 chr11 118435776 - Exonic hg19 UCS TCGA-N9-A4PZ-01A 5 5 5'UTR-5'UTR Intra-chr q12.1 q23.3 Seq+ 74588 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMX2-MED19 TMX2 chr11 57480279 - MED19 chr11 57472701 - Exonic hg19 UCS TCGA-N8-A4PQ-01A 26 12 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 74589 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMX3-METTL4 TMX3 chr18 66378601 - METTL4 chr18 2567653 - Exonic hg19 LUSC TCGA-21-1083-01A 75 40 CDS-5'UTR Intra-chr q22.1 p11.32 Seq+ 74590 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNC-CDH3 TNC chr9 117782839 - CDH3 chr16 68678151 + Exonic hg19 LUAD TCGA-50-6595-01A 2 1 3'UTR-5'UTR Inter-chr q33.1 q22.1 74591 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNFAIP2-ANKS1A TNFAIP2 chr14 103603776 - ANKS1A chr6 34977682 + Exonic hg19 BLCA TCGA-FD-A3SR-01A 2 46 Out-of-frame Inter-chr q32.32 p21.31 74592 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNFAIP3-IL26 TNFAIP3 chr6 138192659 - IL26 chr12 68595863 - Exonic hg19 SARC TCGA-DX-A6BH-01A 38 31 Out-of-frame Inter-chr q23.3 Oncogene Tumor suppressor gene q15 Seq+ 74593 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNFAIP6-ORC4 TNFAIP6 chr2 152214274 - ORC4 chr2 148695962 - Exonic hg19 SARC TCGA-X6-A8C2-01A 13 10 In-Frame Intra-chr q23.3 q23.1 Seq+ 74594 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNFAIP8-CCNB1IP1 TNFAIP8 chr5 118604602 - CCNB1IP1 chr14 20797532 - Exonic hg19 PRAD TCGA-ZG-A9LZ-01A 9 1 5'UTR-5'UTR Inter-chr q23.1 q11.2 Seq+ 74595 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNFAIP8-DMXL1 TNFAIP8 chr5 118604602 - DMXL1 chr5 118464906 + Exonic hg19 PCPG TCGA-WB-A81S-01A 3 2 5'UTR-CDS Intra-chr q23.1 q23.1 74596 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNFAIP8-DMXL1 TNFAIP8 chr5 118604602 - DMXL1 chr5 118576114 + Exonic hg19 BLCA TCGA-XF-A9ST-01A 4 4 5'UTR-CDS Intra-chr q23.1 q23.1 74597 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNFAIP8L1-SPEF2 TNFAIP8L1 chr19 4639641 - SPEF2 chr5 35691139 + Exonic hg19 KIRC TCGA-B4-5377-01A 5 2 5'UTR-CDS Inter-chr p13.3 p13.2 Seq+ 74598 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNFRSF10A-EPB49 TNFRSF10A chr8 23082269 - EPB49 chr8 21924216 + Exonic hg19 BLCA TCGA-G2-A2EJ-01A 3 1 CDS-5'UTR Intra-chr p21.3 Tumor suppressor gene 74599 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNFRSF10B-LOXL2 TNFRSF10B chr8 22926264 - LOXL2 chr8 23225947 - Exonic hg19 KIRP TCGA-BQ-7056-01A 7 3 CDS-5'UTR Intra-chr p21.3 Tumor suppressor gene p21.3 74600 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNFRSF11A-KIAA1468 TNFRSF11A chr18 59992660 - KIAA1468 chr18 59911997 + Exonic hg19 ESCA TCGA-2H-A9GJ-01A 9 31 In-Frame Intra-chr q21.33 q21.33 Seq+ 74601 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNFRSF11A-KIAA1468 TNFRSF11A chr18 60036717 - KIAA1468 chr18 59954584 + Exonic hg19 BRCA TCGA-B6-A0X1-01A 3 1 In-Frame Intra-chr q21.33 q21.33 Seq+ 74602 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNFRSF13B-MPRIP TNFRSF13B chr17 16852052 - MPRIP chr17 16960950 + Exonic hg19 SARC TCGA-DX-A3M1-01A 19 15 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 74603 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNFRSF14-TXLNA TNFRSF14 chr1 2489907 - TXLNA chr1 32659666 + Exonic hg19 COAD TCGA-A6-6648-01A 14 3 Out-of-frame Intra-chr p36.32 Oncogene p35.2 74604 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNFRSF1A-CHD4 TNFRSF1A chr12 6450942 - CHD4 chr12 6682435 - Exonic hg19 SKCM TCGA-D3-A2JN-06A 7 7 In-Frame Intra-chr p13.31 p13.31 Seq+ 74605 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNFRSF1A-SCNN1A TNFRSF1A chr12 6442903 - SCNN1A chr12 6465046 - Exonic hg19 CESC TCGA-VS-A94W-01A 12 3 Out-of-frame Intra-chr p13.31 p13.31 Seq+ 74606 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNFRSF6B-CD74 TNFRSF6B chr20 62322300 - CD74 chr5 149792314 - Exonic hg19 LUAD TCGA-55-A493-01A 2 1 Out-of-frame Inter-chr q13.33 q33.1 74607 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNFSF10-NCEH1 TNFSF10 chr3 172241043 - NCEH1 chr3 172365904 - Exonic hg19 UCEC TCGA-KP-A3W1-01A 4 6 In-Frame Intra-chr q26.31 q26.31 Seq+ 74608 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNFSF13B-RAB20 TNFSF13B chr13 108922772 - RAB20 chr13 111176544 - Exonic hg19 COAD TCGA-DM-A1D7-01A 8 3 In-Frame Intra-chr q33.3 q34 Seq+ 74609 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNFSF14-GRAMD1A TNFSF14 chr19 6667124 - GRAMD1A chr19 35510095 + Exonic hg19 HNSC TCGA-CN-5369-01A 5 3 In-Frame Intra-chr p13.3 q13.11 Seq+ 74610 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNIK-DGCR8 TNIK chr3 170841385 - DGCR8 chr22 20093700 + Exonic hg19 LGG TCGA-TM-A84B-01A 6 3 Out-of-frame Inter-chr q26.31 STE:STE20 q11.21 Seq+ 74611 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNIK-KCNMB2 TNIK chr3 171087409 - KCNMB2 chr3 178525131 + Exonic hg19 LGG TCGA-TM-A84B-01A 22 18 CDS-5'UTR Intra-chr q26.31 STE:STE20 q26.32 Seq+ 74612 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNIK-MTHFD1L TNIK chr3 171087409 - MTHFD1L chr6 151413603 + Exonic hg19 BRCA TCGA-D8-A1XB-01A 3 2 In-Frame Inter-chr q26.31 STE:STE20 q25.1 Seq+ 74613 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNIK-SPATA16 TNIK chr3 171177796 - SPATA16 chr3 172835539 - Exonic hg19 LUSC TCGA-56-7730-01A 2 1 CDS-5'UTR Intra-chr q26.31 STE:STE20 q26.31 Seq+ 74614 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNIK-STXBP5L TNIK chr3 170801944 - STXBP5L chr3 121097563 + Exonic hg19 SKCM TCGA-EE-A2M6-06A 10 4 In-Frame Intra-chr q26.31 STE:STE20 q13.33 Seq+ 74615 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNIP1-ANXA6 TNIP1 chr5 150418658 - ANXA6 chr5 150497398 - Exonic hg19 UCEC TCGA-AX-A3FX-01A 14 10 Out-of-frame Intra-chr q33.1 q33.1 Seq+ 74616 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNIP1-SGCD TNIP1 chr5 150418658 - SGCD chr5 155550866 + Exonic hg19 SARC TCGA-X6-A7WC-01A 7 4 CDS-5'UTR Intra-chr q33.1 q33.2 Seq+ 74617 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNK2-MFI2 TNK2 chr3 195635356 - MFI2 chr3 196737665 - Exonic hg19 TGCT TCGA-XE-A8H4-01A 47 46 5'UTR-CDS Intra-chr q29 Oncogene Seq+ 74618 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNKS-AC068020.1 TNKS chr8 9437893 - AC068020.1 chr8 8101621 + Exonic hg19 LUAD TCGA-67-6217-01A 16 5 Out-of-frame Intra-chr p23.1 p23.1 74619 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNKS-ASAH1 TNKS chr8 9473187 - ASAH1 chr8 17922040 - Exonic hg19 BRCA TCGA-D8-A27N-01A 35 22 In-Frame Intra-chr p23.1 p22 Seq+ 74620 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNKS1BP1-PRSS1 TNKS1BP1 chr11 57085292 - PRSS1 chr7 142457330 + Exonic hg19 PAAD TCGA-F2-A44H-01A 2 7 CDS-5'UTR Inter-chr q12.1 74621 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNKS1BP1-TYK2 TNKS1BP1 chr11 57067118 - TYK2 chr19 10491352 - Exonic hg19 PAAD TCGA-IB-7644-01A 2 3 Out-of-frame Inter-chr q12.1 p13.2 TK:JakA 74622 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNKS2-HECTD2 TNKS2 chr10 93602148 - HECTD2 chr10 93220184 + Exonic hg19 PRAD TCGA-YL-A9WH-01A 9 7 In-Frame Intra-chr q23.32 q23.32 Seq+ 74623 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNKS2-RP11-451M19.3 TNKS2 chr10 93614883 - RP11-451M19.3 chr10 111713649 - Exonic hg19 BRCA TCGA-BH-A1EY-01A 110 89 Out-of-frame Intra-chr q23.32 74624 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNNI3-ZNF607 TNNI3 chr19 55668947 - ZNF607 chr19 38200723 - Exonic hg19 BLCA TCGA-DK-A3X2-01A 3 1 Out-of-frame Intra-chr q13.42 q13.12 Transcription factor 74625 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNPO1-ENC1 TNPO1 chr5 72168547 - ENC1 chr5 73933526 - Exonic hg19 PRAD TCGA-EJ-5519-01A 11 9 CDS-5'UTR Intra-chr q13.2 q13.3 Seq+ 74626 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNPO1-GTF2H1 TNPO1 chr5 72201272 - GTF2H1 chr11 18373428 + Exonic hg19 BRCA TCGA-E2-A1L7-01A 17 10 3'UTR-CDS Inter-chr q13.2 p15.1 Seq+ 74627 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNPO1-MEF2C TNPO1 chr5 72112579 - MEF2C chr5 88057145 - Exonic hg19 ACC TCGA-OR-A5J1-01A 3 2 In-Frame Intra-chr q13.2 q14.3 Transcription factor Seq+ 74628 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNPO2-DNASE2 TNPO2 chr19 12816054 - DNASE2 chr19 12987177 - Exonic hg19 LUSC TCGA-43-5670-01A 27 30 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 74629 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNPO2-ELK3 TNPO2 chr19 12810008 - ELK3 chr12 96588323 + Exonic hg19 SKCM TCGA-EE-A2GO-06A 2 1 3'UTR-5'UTR Inter-chr p13.13 q23.1 Transcription factor 74630 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNPO2-HOOK2 TNPO2 chr19 12822110 - HOOK2 chr19 12885711 - Exonic hg19 LUSC TCGA-37-A5EN-01A 5 3 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 74631 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNPO2-HOOK2 TNPO2 chr19 12834063 - HOOK2 chr19 12885711 - Exonic hg19 STAD TCGA-F1-6875-01A 2 12 5'UTR-CDS Intra-chr p13.13 p13.13 Seq+ 74632 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNPO2-NFIX TNPO2 chr19 12834063 - NFIX chr19 13183861 + Exonic hg19 SKCM TCGA-DA-A1I0-06A 159 208 5'UTR-CDS Intra-chr p13.13 p13.13 Transcription factor Seq+ 74633 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNPO3-AHCYL2 TNPO3 chr7 128694705 - AHCYL2 chr7 129019482 + Exonic hg19 COAD TCGA-CM-4747-01A 33 20 In-Frame Intra-chr q32.1 q32.1 Seq+ 74634 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNPO3-DYM TNPO3 chr7 128694705 - DYM chr18 46690157 - Exonic hg19 OV TCGA-24-1426-01A 5 5 Out-of-frame Inter-chr q32.1 q21.1 Seq+ 74635 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNPO3-RCAN1 TNPO3 chr7 128614922 - RCAN1 chr21 35896008 - Exonic hg19 BRCA TCGA-AR-A1AI-01A 2 4 Out-of-frame Inter-chr q32.1 q22.12 Seq+ 74636 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNR-RFWD2 TNR chr1 175497405 - RFWD2 chr1 175958615 - Exonic hg19 LGG TCGA-TQ-A7RU-01A 3 8 5'UTR-CDS Intra-chr q25.1 q25.2 Tumor suppressor gene Seq+ 74637 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC18-DGKB TNRC18 chr7 5434071 - DGKB chr7 14217776 - Exonic hg19 SKCM TCGA-FR-A729-06A 22 18 In-Frame Intra-chr p22.1 p21.2 Seq+ 74638 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC18-HDAC9 TNRC18 chr7 5401528 - HDAC9 chr7 18535885 + Exonic hg19 SKCM TCGA-DA-A1HW-06A 6 2 Out-of-frame Intra-chr p22.1 p21.1 Seq+ 74639 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC18-MKLN1 TNRC18 chr7 5460691 - MKLN1 chr7 131060183 + Exonic hg19 LGG TCGA-HT-A617-01A 4 1 Out-of-frame Intra-chr p22.1 q32.3 74640 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5434071 - RNF216 chr7 5663756 - Exonic hg19 LUAD TCGA-78-8660-01A 25 12 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 74641 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5410006 - RNF216 chr7 5692141 - Exonic hg19 BRCA TCGA-A2-A0YT-01A 30 38 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 74642 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5460691 - RNF216 chr7 5681007 - Exonic hg19 UCEC TCGA-A5-A2K4-01A 23 15 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 74643 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5410006 - RNF216 chr7 5681007 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 6 4 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 74644 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5446781 - RNF216 chr7 5681007 - Exonic hg19 UCEC TCGA-AX-A3FX-01A 44 45 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 74645 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5399029 - RNF216 chr7 5765069 - Exonic hg19 UCEC TCGA-B5-A3S1-01A 15 9 In-Frame Intra-chr p22.1 p22.1 Seq+ 74646 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5460691 - RNF216 chr7 5681007 - Exonic hg19 STAD TCGA-CD-8524-01A 10 54 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 74647 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC18-TGS1 TNRC18 chr7 5410006 - TGS1 chr8 56723440 + Exonic hg19 LUAD TCGA-MP-A4T9-01A 20 15 In-Frame Inter-chr p22.1 q12.1 Tumor suppressor gene Seq+ 74648 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC18-TSGA13 TNRC18 chr7 5413686 - TSGA13 chr7 130356628 - Exonic hg19 SKCM TCGA-FS-A1ZY-06A 17 15 Out-of-frame Intra-chr p22.1 q32.2 Seq+ 74649 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC18-ZC3HAV1 TNRC18 chr7 5463072 - ZC3HAV1 chr7 138768778 - Exonic hg19 BRCA TCGA-BH-A0B2-01A 18 9 5'UTR-CDS Intra-chr p22.1 q34 Seq+ 74650 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC6A-LIX1L TNRC6A chr16 24809287 - LIX1L chr1 145492235 + Exonic hg19 PCPG TCGA-TT-A6YN-01A 17 22 Out-of-frame Inter-chr p12.1 q21.1 Seq+ 74651 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC6A-PRKCB TNRC6A chr16 24741621 - PRKCB chr16 24192111 + Exonic hg19 GBM TCGA-06-0882-01A 2 1 In-Frame Intra-chr p12.1 p12.2 Tumor suppressor gene Seq+ 74652 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC6B-ATXN10 TNRC6B chr22 40574144 - ATXN10 chr22 46125305 + Exonic hg19 SKCM TCGA-BF-A5EQ-01A 9 11 In-Frame Intra-chr q13.1 q13.31 Seq+ 74653 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC6B-BASP1 TNRC6B chr22 40552186 - BASP1 chr5 17275317 + Exonic hg19 KIRP TCGA-P4-A5EB-01A 11 4 5'UTR-5'UTR Inter-chr q13.1 p15.1 Tumor suppressor gene Seq+ 74654 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC6B-CBY1 TNRC6B chr22 40552186 - CBY1 chr22 39061551 + Exonic hg19 PAAD TCGA-S4-A8RP-01A 3 5 5'UTR-5'UTR Intra-chr q13.1 q13.1 Seq+ 74655 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC6B-EP300 TNRC6B chr22 40552186 - EP300 chr22 41572251 + Exonic hg19 KIRC TCGA-B0-5692-01A 10 9 Out-of-frame Intra-chr q13.1 q13.2 Oncogene Seq+ 74656 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC6B-FAM19A5 TNRC6B chr22 40552186 - FAM19A5 chr22 49145651 + Exonic hg19 LUAD TCGA-44-7659-01A 4 2 Out-of-frame Intra-chr q13.1 q13.32 Seq+ 74657 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC6B-FAM83F TNRC6B chr22 40441002 - FAM83F chr22 40415172 + Exonic hg19 SKCM TCGA-GN-A266-06A 4 1 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 74658 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC6B-FAM83F TNRC6B chr22 40441002 - FAM83F chr22 40415172 + Exonic hg19 BLCA TCGA-XF-AAMX-01A 13 4 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 74659 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC6B-PES1 TNRC6B chr22 40552186 - PES1 chr22 31001504 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 10 3 CDS-3'UTR Intra-chr q13.1 q12.2 Seq+ 74660 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC6B-SEMA6D TNRC6B chr22 40552186 - SEMA6D chr15 47762671 + Exonic hg19 SARC TCGA-DX-A6YZ-01A 3 3 5'UTR-5'UTR Inter-chr q13.1 q21.1 Seq+ 74661 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC6B-STK11 TNRC6B chr22 40697337 - STK11 chr19 1222984 + Exonic hg19 LUAD TCGA-99-8033-01A 8 4 Out-of-frame Inter-chr q13.1 p13.3 Oncogene Tumor suppressor gene Seq+ 74662 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC6B-TMEM184B TNRC6B chr22 40552186 - TMEM184B chr22 38644025 - Exonic hg19 LGG TCGA-WY-A859-01A 38 11 5'UTR-5'UTR Intra-chr q13.1 q13.1 Seq+ 74663 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC6B-TPST2 TNRC6B chr22 40647204 - TPST2 chr22 26940641 - Exonic hg19 BLCA TCGA-FJ-A3Z7-01A 2 2 CDS-5'UTR Intra-chr q13.1 q12.1 Seq+ 74664 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC6B-ZC3H7B TNRC6B chr22 40441002 - ZC3H7B chr22 41751473 + Exonic hg19 LUAD TCGA-44-7659-01A 2 2 5'UTR-CDS Intra-chr q13.1 q13.2 Seq+ 74665 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC6C-APPBP2 TNRC6C chr17 76089205 - APPBP2 chr17 58577848 - Exonic hg19 BRCA TCGA-D8-A27N-01A 5 5 Out-of-frame Intra-chr q25.3 q23.2 Seq+ 74666 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC6C-PHACTR1 TNRC6C chr17 76001160 - PHACTR1 chr6 13287295 + Exonic hg19 LUSC TCGA-56-A4BY-01A 5 1 5'UTR-CDS Inter-chr q25.3 Seq+ 74667 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC6C-PLCB4 TNRC6C chr17 76079247 - PLCB4 chr20 9433994 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 33 24 In-Frame Inter-chr q25.3 p12.3 Seq+ 74668 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC6C-RPTOR TNRC6C chr17 76001160 - RPTOR chr17 78704360 + Exonic hg19 UVM TCGA-WC-A884-01A 11 4 5'UTR-CDS Intra-chr q25.3 q25.3 Seq+ 74669 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNRC6C-SCAPER TNRC6C chr17 76047529 - SCAPER chr15 76697020 - Exonic hg19 BRCA TCGA-C8-A1HI-01A 3 3 Out-of-frame Inter-chr q25.3 q24.3 Seq+ 74670 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNS1-RNF25 TNS1 chr2 218771058 - RNF25 chr2 219533402 - Exonic hg19 UCEC TCGA-EY-A3QX-01A 2 4 5'UTR-CDS Intra-chr q35 q35 Seq+ 74671 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNS1-SPTBN1 TNS1 chr2 218679635 - SPTBN1 chr2 54826229 + Exonic hg19 LGG TCGA-E1-A7YD-01A 8 12 In-Frame Intra-chr q35 p16.2 Tumor suppressor gene Seq+ 74672 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNS1-TMBIM1 TNS1 chr2 218771933 - TMBIM1 chr2 219144849 - Exonic hg19 LUSC TCGA-NC-A5HL-01A 53 3 5'UTR-CDS Intra-chr q35 q35 Seq+ 74673 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNS3-ALG13 TNS3 chr7 47621649 - ALG13 chrX 110925360 + Exonic hg19 SARC TCGA-FX-A2QS-01A 3 20 5'UTR-5'UTR Inter-chr p12.3 q23 Seq+ 74674 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNS3-ELMO1 TNS3 chr7 47451325 - ELMO1 chr7 36934622 - Exonic hg19 LUAD TCGA-55-8615-01A 8 2 In-Frame Intra-chr p12.3 p14.1 Seq+ 74675 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNS3-FOXI2 TNS3 chr7 47384353 - FOXI2 chr10 129536784 + Exonic hg19 BRCA TCGA-BH-A0HP-01A 2 1 In-Frame Inter-chr p12.3 q26.2 Transcription factor 74676 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNS3-HSPA1L TNS3 chr7 47319762 - HSPA1L chr6 31779762 - Exonic hg19 BRCA TCGA-BH-A18L-01A 9 7 CDS-5'UTR Inter-chr p12.3 Seq+ 74677 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNS3-HUS1 TNS3 chr7 47384353 - HUS1 chr7 48018413 - Exonic hg19 SARC TCGA-IE-A4EH-01A 5 2 In-Frame Intra-chr p12.3 p12.3 Seq+ 74678 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNS3-HUS1 TNS3 chr7 47436397 - HUS1 chr7 48018413 - Exonic hg19 LIHC TCGA-KR-A7K8-01A 2 2 In-Frame Intra-chr p12.3 p12.3 Seq+ 74679 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNS3-PKD1L1 TNS3 chr7 47474880 - PKD1L1 chr7 47898483 - Exonic hg19 UCEC TCGA-AX-A3G4-01A 3 1 In-Frame Intra-chr p12.3 p12.3 Seq+ 74680 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNS3-PKD1L1 TNS3 chr7 47546505 - PKD1L1 chr7 47894863 - Exonic hg19 SKCM TCGA-ER-A19H-06A 15 9 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 74681 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNS3-ZNRF2 TNS3 chr7 47474880 - ZNRF2 chr7 30401993 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 8 6 Out-of-frame Intra-chr p12.3 p14.3 Seq+ 74682 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNS4-CCR7 TNS4 chr17 38640736 - CCR7 chr17 38715194 - Exonic hg19 LUSC TCGA-33-AASI-01A 145 5 In-Frame Intra-chr q21.2 q21.2 Seq+ 74683 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNXB-CMAHP TNXB chr6 32082771 - CMAHP chr6 25115328 - Exonic hg19 HNSC TCGA-BA-4078-01A 5 1 5'UTR-3'UTR Intra-chr p22.3 74684 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TNXB-DDR1 TNXB chr6 32029174 - DDR1 chr6 30865156 + Exonic hg19 MESO TCGA-SH-A7BD-01A 2 5 Out-of-frame Intra-chr TK:DDR Seq+ 74685 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOB1-TTLL6 TOB1 chr17 48943419 - TTLL6 chr17 46882353 - Exonic hg19 LUAD TCGA-50-5930-01A 2 1 5'UTR-CDS Intra-chr q21.33 q21.32 74686 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOB1-UTRN TOB1 chr17 48939584 - UTRN chr6 144665237 + Exonic hg19 KIRP TCGA-DW-7839-01A 2 3 Out-of-frame Inter-chr q21.33 q24.2 74687 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOB2-ACO2 TOB2 chr22 41842383 - ACO2 chr22 41903795 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 9 21 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 74688 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOB2-MPPED1 TOB2 chr22 41842383 - MPPED1 chr22 43820914 + Exonic hg19 SKCM TCGA-EB-A5KH-06A 4 13 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 74689 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOB2-MRPS18B TOB2 chr22 41842383 - MRPS18B chr6 30592660 + Exonic hg19 PRAD TCGA-2A-A8W1-01A 186 184 5'UTR-CDS Inter-chr q13.2 Seq+ 74690 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOLLIP-MUC5B TOLLIP chr11 1307232 - MUC5B chr11 1273573 + Exonic hg19 ESCA TCGA-2H-A9GI-01A 2 11 In-Frame Intra-chr p15.5 p15.5 Seq+ 74691 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOM1-ARFGEF2 TOM1 chr22 35743965 - ARFGEF2 chr20 47615777 + Exonic hg19 SARC TCGA-DX-A3UB-01A 2 3 Out-of-frame Inter-chr q12.3 q13.13 74692 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOM1-HMGXB4 TOM1 chr22 35695973 - HMGXB4 chr22 35658316 + Exonic hg19 BRCA TCGA-LL-A5YP-01A 5 1 5'UTR-5'UTR Intra-chr q12.3 q12.3 74693 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOM1-PITPNB TOM1 chr22 35695973 - PITPNB chr22 28293880 - Exonic hg19 BRCA TCGA-A8-A06N-01A 31 20 Out-of-frame Intra-chr q12.3 q12.1 Seq+ 74694 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOM1L2-AC005863.1 TOM1L2 chr17 17875576 - AC005863.1 chr17 14673563 - Exonic hg19 BRCA TCGA-A8-A090-01A 9 14 Out-of-frame Intra-chr p11.2 Tumor suppressor gene p12 74695 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOM1L2-ATPAF2 TOM1L2 chr17 17810761 - ATPAF2 chr17 17928018 - Exonic hg19 HNSC TCGA-CV-7253-01A 124 111 In-Frame Intra-chr p11.2 Tumor suppressor gene p11.2 Seq+ 74696 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOM1L2-NXN TOM1L2 chr17 17787948 - NXN chr17 729318 - Exonic hg19 STAD TCGA-CG-4477-01A 26 22 In-Frame Intra-chr p11.2 Tumor suppressor gene p13.3 Seq+ 74697 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOM1L2-ULK2 TOM1L2 chr17 17782941 - ULK2 chr17 19769141 - Exonic hg19 BRCA TCGA-D8-A27G-01A 3 3 In-Frame Intra-chr p11.2 Tumor suppressor gene p11.2 Other:ULK Seq+ 74698 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOMM20-EPHB2 TOMM20 chr1 235291910 - EPHB2 chr1 23208852 + Exonic hg19 STAD TCGA-BR-7716-01A 3 125 In-Frame Intra-chr q42.3 p36.12 Tumor suppressor gene Seq+ 74699 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOMM34-ERC1 TOMM34 chr20 43580474 - ERC1 chr12 1553728 + Exonic hg19 BRCA TCGA-C8-A12P-01A 4 3 Out-of-frame Inter-chr q13.12 Seq+ 74700 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOMM40-PDZRN4 TOMM40 chr19 45397323 - PDZRN4 chr12 41900258 + Exonic hg19 BLCA TCGA-FD-A3SO-01A 9 5 Out-of-frame Inter-chr q13.32 q12 Seq+ 74701 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOMM40-PVRL2 TOMM40 chr19 45394946 - PVRL2 chr19 45375110 + Exonic hg19 BRCA TCGA-AO-A129-01A 2 4 In-Frame Intra-chr q13.32 74702 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOMM7-KLK2 TOMM7 chr7 22852592 - KLK2 chr19 51376695 + Exonic hg19 PRAD TCGA-KK-A6E4-01A 2 1 Out-of-frame Inter-chr p15.3 q13.33 74703 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOMM70A-KCTD8 TOMM70A chr3 100119470 - KCTD8 chr4 44177267 - Exonic hg19 LGG TCGA-CS-4943-01A 76 66 Out-of-frame Inter-chr p13 Seq+ 74704 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOP1-C17orf64 TOP1 chr20 39729993 - C17orf64 chr17 58503144 + Exonic hg19 BRCA TCGA-C8-A273-01A 163 90 In-Frame Inter-chr q12 Oncogene q23.2 Seq+ 74705 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOP1-CA10 TOP1 chr20 39658095 - CA10 chr17 49825178 - Exonic hg19 HNSC TCGA-MZ-A7D7-01A 7 16 Out-of-frame Inter-chr q12 Oncogene q22 Seq+ 74706 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOP1-CDH4 TOP1 chr20 39658095 - CDH4 chr20 60318619 + Exonic hg19 LUAD TCGA-05-4244-01A 56 45 In-Frame Intra-chr q12 Oncogene q13.33 Tumor suppressor gene Seq+ 74707 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOP1-LYZ TOP1 chr20 39729993 - LYZ chr12 69743888 + Exonic hg19 SARC TCGA-DX-A6BG-01A 7 3 Out-of-frame Inter-chr q12 Oncogene q15 Seq+ 74708 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOP1-PZP TOP1 chr20 39690130 - PZP chr12 9356547 - Exonic hg19 BRCA TCGA-E2-A14R-01A 14 9 In-Frame Inter-chr q12 Oncogene p13.31 Seq+ 74709 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOP1-SLC2A10 TOP1 chr20 39746936 - SLC2A10 chr20 45362395 + Exonic hg19 LUSC TCGA-6A-AB49-01A 5 5 Out-of-frame Intra-chr q12 Oncogene q13.12 Seq+ 74710 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOP2B-NGLY1 TOP2B chr3 25683813 - NGLY1 chr3 25775473 - Exonic hg19 BLCA TCGA-DK-A6B2-01A 9 6 Out-of-frame Intra-chr p24.2 p24.2 Seq+ 74711 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOP3A-ANAPC16 TOP3A chr17 18186012 - ANAPC16 chr10 73990124 + Exonic hg19 LIHC TCGA-MR-A8JO-01A 6 6 Out-of-frame Inter-chr q22.1 Seq+ 74712 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOP3A-HEATR6 TOP3A chr17 18205199 - HEATR6 chr17 58151247 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 4 1 In-Frame Intra-chr q23.1 Seq+ 74713 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOP3A-MYO18A TOP3A chr17 18202873 - MYO18A chr17 27430682 - Exonic hg19 LUAD TCGA-38-4630-01A 23 37 In-Frame Intra-chr q11.2 Oncogene Seq+ 74714 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOP3A-TEKT1 TOP3A chr17 18217913 - TEKT1 chr17 6719281 - Exonic hg19 BRCA TCGA-AC-A6IX-01A 12 10 Out-of-frame Intra-chr p13.1 Seq+ 74715 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOP3A-TEKT1 TOP3A chr17 18217913 - TEKT1 chr17 6719281 - Exonic hg19 BRCA TCGA-AC-A6IX-06A 19 13 Out-of-frame Intra-chr p13.1 Seq+ 74716 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOP3A-ZCCHC8 TOP3A chr17 18198017 - ZCCHC8 chr12 122977336 - Exonic hg19 BLCA TCGA-K4-A3WU-01B 3 1 In-Frame Inter-chr q24.31 Seq+ 74717 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOPBP1-NEK11 TOPBP1 chr3 133356720 - NEK11 chr3 131068401 + Exonic hg19 BRCA TCGA-A8-A06U-01A 60 65 Out-of-frame Intra-chr q22.1 q22.1 Other:NEK Seq+ 74718 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOPBP1-SPDEF TOPBP1 chr3 133341935 - SPDEF chr6 34512261 - Exonic hg19 SARC TCGA-K1-A42X-01A 15 7 CDS-5'UTR Inter-chr q22.1 p21.31 Transcription factor Seq+ 74719 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOPBP1-SPDEF TOPBP1 chr3 133341935 - SPDEF chr6 34512261 - Exonic hg19 SARC TCGA-K1-A42X-02A 36 17 CDS-5'UTR Inter-chr q22.1 p21.31 Transcription factor Seq+ 74720 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOPORS-ADAMTSL1 TOPORS chr9 32550772 - ADAMTSL1 chr9 18826282 + Exonic hg19 LGG TCGA-IK-7675-01A 9 1 Out-of-frame Intra-chr p21.1 Tumor suppressor gene Transcription factor p22.2 Seq+ 74721 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOR1AIP2-ACBD6 TOR1AIP2 chr1 179846374 - ACBD6 chr1 180283857 - Exonic hg19 OV TCGA-24-2288-01A 2 11 5'UTR-CDS Intra-chr q25.2 q25.3 Seq+ 74722 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOR1B-ARHGAP27 TOR1B chr9 132566617 - ARHGAP27 chr17 43483449 - Exonic hg19 PRAD TCGA-HC-7748-01A 4 2 CDS-5'UTR Inter-chr q34.11 74723 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOX-CHD7 TOX chr8 60031445 - CHD7 chr8 61693559 + Exonic hg19 COAD TCGA-4T-AA8H-01A 2 1 In-Frame Intra-chr q12.1 q12.2 74724 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOX-PGBD2 TOX chr8 59851861 - PGBD2 chr1 249208015 + Exonic hg19 BRCA TCGA-OL-A66I-01A 5 3 CDS-5'UTR Inter-chr q12.1 q44 Seq+ 74725 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOX3-CNTN5 TOX3 chr16 52580549 - CNTN5 chr11 100061858 + Exonic hg19 PRAD TCGA-KK-A59V-01A 7 6 Out-of-frame Inter-chr q12.1 q22.1 74726 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOX3-HEYL TOX3 chr16 52497846 - HEYL chr1 40098387 - Exonic hg19 LUAD TCGA-97-8177-01A 6 6 Out-of-frame Inter-chr q12.1 p34.2 Transcription factor Seq+ 74727 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOX3-ITFG1 TOX3 chr16 52479906 - ITFG1 chr16 47196575 - Exonic hg19 BRCA TCGA-AR-A24K-01A 27 10 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 74728 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TOX3-PHKB TOX3 chr16 52580549 - PHKB chr16 47644737 + Exonic hg19 BRCA TCGA-E9-A247-01A 54 41 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 74729 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TP53-C17orf39 TP53 chr17 7590695 - C17orf39 chr17 17948461 + Exonic hg19 LGG TCGA-DU-5853-01A 25 3 5'UTR-CDS Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor 74730 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TP53-CHD3 TP53 chr17 7590695 - CHD3 chr17 7798657 + Exonic hg19 SKCM TCGA-EE-A2GU-06A 130 56 5'UTR-CDS Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.1 Seq+ 74731 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TP53-ECSIT TP53 chr17 7576853 - ECSIT chr19 11630008 - Exonic hg19 PRAD TCGA-WW-A8ZI-01A 5 6 CDS-5'UTR Inter-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.2 Seq+ 74732 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TP53-FARP2 TP53 chr17 7590695 - FARP2 chr2 242312499 + Exonic hg19 PRAD TCGA-KK-A8IC-01A 18 9 5'UTR-5'UTR Inter-chr p13.1 Oncogene Tumor suppressor gene Transcription factor q37.3 Seq+ 74733 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TP53-KIAA0753 TP53 chr17 7590695 - KIAA0753 chr17 6498373 - Exonic hg19 PRAD TCGA-EJ-5525-01A 25 20 5'UTR-CDS Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.1 Seq+ 74734 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TP53BP1-ATP8B4 TP53BP1 chr15 43762056 - ATP8B4 chr15 50366382 - Exonic hg19 SARC TCGA-FX-A3NK-01A 3 2 Out-of-frame Intra-chr q15.3 Tumor suppressor gene q21.2 Seq+ 74735 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TP53BP1-DAPK2 TP53BP1 chr15 43771595 - DAPK2 chr15 64263760 - Exonic hg19 LGG TCGA-DU-A7TC-01A 4 7 In-Frame Intra-chr q15.3 Tumor suppressor gene q22.31 CAMK:DAPK Tumor suppressor gene Seq+ 74736 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TP53BP1-DMXL2 TP53BP1 chr15 43724392 - DMXL2 chr15 51809364 - Exonic hg19 BRCA TCGA-A7-A26G-01A 10 5 In-Frame Intra-chr q15.3 Tumor suppressor gene q21.2 Seq+ 74737 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TP53BP1-STAU2 TP53BP1 chr15 43720214 - STAU2 chr8 74440039 - Exonic hg19 LUAD TCGA-97-A4M3-01A 39 15 In-Frame Inter-chr q15.3 Tumor suppressor gene q21.11 Seq+ 74738 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TP53BP2-WDR26 TP53BP2 chr1 224033356 - WDR26 chr1 224623593 - Exonic hg19 BRCA TCGA-E2-A1LK-01A 3 1 5'UTR-5'UTR Intra-chr q41 Tumor suppressor gene q42.12 74739 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TP53I13-CEP112 TP53I13 chr17 27899075 - CEP112 chr17 64173138 - Exonic hg19 READ TCGA-AG-3732-01A 5 7 Out-of-frame Intra-chr q11.2 q24.1 Seq+ 74740 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TP63-LEPREL1 TP63 chr3 189526315 - LEPREL1 chr3 189713231 - Exonic hg19 HNSC TCGA-CN-A49A-01A 7 3 In-Frame Intra-chr q28 Tumor suppressor gene Transcription factor Seq+ 74741 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TP63-TPRG1 TP63 chr3 189349366 - TPRG1 chr3 189028175 + Exonic hg19 LUSC TCGA-77-A5G7-01B 6 4 In-Frame Intra-chr q28 Tumor suppressor gene Transcription factor q28 Seq+ 74742 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TP73-CEP104 TP73 chr1 3599744 - CEP104 chr1 3768985 - Exonic hg19 LGG TCGA-HT-A5RA-01A 2 2 5'UTR-5'UTR Intra-chr p36.32 Tumor suppressor gene Transcription factor p36.32 Seq+ 74743 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPCN1-CTD-2021H9.3 TPCN1 chr12 113724899 - CTD-2021H9.3 chr12 71441459 - Exonic hg19 ACC TCGA-OR-A5JM-01A 328 166 Out-of-frame Intra-chr q24.13 74744 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPCN2-RARA TPCN2 chr11 68830458 - RARA chr17 38487109 + Exonic hg19 BRCA TCGA-EW-A1IW-01A 14 10 CDS-5'UTR Inter-chr q13.3 q21.2 Oncogene Transcription factor Seq+ 74745 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPCN2-TMEM179B TPCN2 chr11 68816574 - TMEM179B chr11 62556495 + Exonic hg19 LUSC TCGA-77-8009-01A 24 36 Out-of-frame Intra-chr q13.3 q12.3 Seq+ 74746 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPD52-CCT5 TPD52 chr8 80947749 - CCT5 chr5 10250033 + Exonic hg19 PRAD TCGA-G9-6371-01A 2 2 Out-of-frame Inter-chr q21.13 p15.2 74747 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPD52-COPS5 TPD52 chr8 81083660 - COPS5 chr8 67971680 - Exonic hg19 BRCA TCGA-AN-A0XV-01A 45 67 Out-of-frame Intra-chr q21.13 q13.1 Seq+ 74748 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPD52-RALYL TPD52 chr8 81083660 - RALYL chr8 85785519 + Exonic hg19 LUSC TCGA-77-8009-01A 12 21 In-Frame Intra-chr q21.13 q21.2 Seq+ 74749 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPD52-STAU2 TPD52 chr8 81083660 - STAU2 chr8 74601048 - Exonic hg19 BRCA TCGA-E2-A2P5-01A 2 6 Out-of-frame Intra-chr q21.13 q21.11 Seq+ 74750 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPD52-ZNF704 TPD52 chr8 81083660 - ZNF704 chr8 81555364 - Exonic hg19 STAD TCGA-BR-8485-01A 7 13 Out-of-frame Intra-chr q21.13 q21.13 Transcription factor Seq+ 74751 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPD52L1-SAMD3 TPD52L1 chr6 125475116 - SAMD3 chr6 130634238 - Exonic hg19 PRAD TCGA-KK-A8IF-01A 10 1 5'UTR-5'UTR Intra-chr q22.31 q23.1 Seq+ 74752 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPD52L2-PDZRN4 TPD52L2 chr20 62500794 - PDZRN4 chr12 41900258 + Exonic hg19 LUAD TCGA-55-8087-01A 70 72 In-Frame Inter-chr q13.33 q12 Seq+ 74753 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPM1-ALK TPM1 chr15 63354844 - ALK chr2 29446394 - Exonic hg19 BLCA TCGA-GV-A3QG-01A 248 211 In-Frame Inter-chr q22.2 p23.1 TK:ALK Oncogene Seq+ 74754 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPM2-NDUFV1 TPM2 chr9 35682011 - NDUFV1 chr11 67375697 + Exonic hg19 SARC TCGA-DX-A6B9-01A 2 4 Out-of-frame Inter-chr p13.3 q13.2 74755 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPM3-NTRK1 TPM3 chr1 154142876 - NTRK1 chr1 156845312 + Exonic hg19 SARC TCGA-DX-A3UA-01A 15 49 In-Frame Intra-chr q21.3 q23.1 Oncogene KB Pub Seq+ 74756 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPM3-NTRK1 TPM3 chr1 154142876 - NTRK1 chr1 156844363 + Exonic hg19 THCA TCGA-EL-A3D4-01A 18 69 In-Frame Intra-chr q21.3 q23.1 Oncogene KB Pub Seq+ 74757 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPM4-IGFL2 TPM4 chr19 16178548 - IGFL2 chr19 46663672 + Exonic hg19 SARC TCGA-3B-A9HX-01A 75 42 Out-of-frame Intra-chr p13.12 q13.32 Seq+ 74758 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPPP-FAM134B TPPP chr5 677865 - FAM134B chr5 16572211 - Exonic hg19 STAD TCGA-BR-7959-01A 10 36 In-Frame Intra-chr p15.33 Seq+ 74759 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPRA1-LPP TPRA1 chr3 127298583 - LPP chr3 188583988 + Exonic hg19 KIRP TCGA-G7-6793-01A 7 3 In-Frame Intra-chr q21.3 q27.3 Oncogene Seq+ 74760 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPRG1-DGKG TPRG1 chr3 188933172 - DGKG chr3 185983095 - Exonic hg19 BRCA TCGA-AO-A03L-01A 3 7 Out-of-frame Intra-chr q28 q27.3 Seq+ 74761 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPRN-CTDNEP1 TPRN chr9 140093439 - CTDNEP1 chr17 7147954 - Exonic hg19 UCS TCGA-NA-A4QV-01A 23 28 Out-of-frame Inter-chr q34.3 p13.1 Seq+ 74762 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPST2-CRYBB1 TPST2 chr22 26986017 - CRYBB1 chr22 27012302 - Exonic hg19 UCEC TCGA-EO-A3KW-01A 10 7 5'UTR-5'UTR Intra-chr q12.1 q12.1 Seq+ 74763 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPST2-CRYBB1 TPST2 chr22 26932254 - CRYBB1 chr22 26997985 - Exonic hg19 LIHC TCGA-ZS-A9CF-01A 150 104 In-Frame Intra-chr q12.1 q12.1 Seq+ 74764 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPST2-CRYBB1 TPST2 chr22 26932254 - CRYBB1 chr22 26997985 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 82 61 In-Frame Intra-chr q12.1 q12.1 Seq+ 74765 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPT1-ARFGEF2 TPT1 chr13 45911313 - ARFGEF2 chr20 47615777 + Exonic hg19 BRCA TCGA-A7-A3IY-01A 2 4 Out-of-frame Inter-chr q14.13 q13.13 74766 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPT1-DDX27 TPT1 chr13 45911313 - DDX27 chr20 47849303 + Exonic hg19 STAD TCGA-BR-8485-01A 2 1 Out-of-frame Inter-chr q14.13 q13.13 74767 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPT1-EIF2AK2 TPT1 chr13 45911313 - EIF2AK2 chr2 37342384 - Exonic hg19 STAD TCGA-BR-8679-01A 2 6 Out-of-frame Inter-chr q14.13 p22.2 74768 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPT1-ERBB3 TPT1 chr13 45911313 - ERBB3 chr12 56492035 + Exonic hg19 HNSC TCGA-CN-5356-01A 2 2 Out-of-frame Inter-chr q14.13 q13.2 Oncogene 74769 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPT1-ERBB3 TPT1 chr13 45911313 - ERBB3 chr12 56492035 + Exonic hg19 UCS TCGA-N6-A4VC-01A 2 29 Out-of-frame Inter-chr q14.13 q13.2 Oncogene 74770 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPT1-LUC7L3 TPT1 chr13 45911313 - LUC7L3 chr17 48834056 + Exonic hg19 BRCA TCGA-A7-A4SE-01A 2 6 Out-of-frame Inter-chr q14.13 q21.33 74771 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPT1-MFN1 TPT1 chr13 45911008 - MFN1 chr3 179096011 + Exonic hg19 PRAD TCGA-EJ-7791-01A 2 8 Out-of-frame Inter-chr q14.13 q26.33 74772 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPT1-MME TPT1 chr13 45911008 - MME chr3 154801733 + Exonic hg19 READ TCGA-DY-A1DD-01A 2 1 Out-of-frame Inter-chr q14.13 q25.2 Tumor suppressor gene 74773 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPT1-MYH9 TPT1 chr13 45911008 - MYH9 chr22 36695088 - Exonic hg19 COAD TCGA-DM-A285-01A 2 1 3'UTR-CDS Inter-chr q14.13 q12.3 Oncogene Tumor suppressor gene 74774 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPT1-NCALD TPT1 chr13 45911313 - NCALD chr8 102813898 - Exonic hg19 BRCA TCGA-B6-A1KF-01A 2 7 Out-of-frame Inter-chr q14.13 q22.3 74775 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPT1-NCALD TPT1 chr13 45911313 - NCALD chr8 102813898 - Exonic hg19 KIRC TCGA-BP-4994-01A 2 28 Out-of-frame Inter-chr q14.13 q22.3 74776 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPT1-PEX1 TPT1 chr13 45911008 - PEX1 chr7 92146729 - Exonic hg19 SARC TCGA-K1-A42X-02A 2 3 Out-of-frame Inter-chr q14.13 q21.2 74777 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPT1-PLEKHB2 TPT1 chr13 45911008 - PLEKHB2 chr2 131876464 + Exonic hg19 PRAD TCGA-HC-A6HY-01A 2 6 Out-of-frame Inter-chr q14.13 q21.1 74778 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPT1-SIAE TPT1 chr13 45911008 - SIAE chr11 124543777 - Exonic hg19 THCA TCGA-E3-A3E2-01A 2 46 3'UTR-5'UTR Inter-chr q14.13 q24.2 74779 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPX2-ACLY TPX2 chr20 30330450 - ACLY chr17 40070153 - Exonic hg19 STAD TCGA-BR-8077-01A 3 83 Out-of-frame Inter-chr q11.21 q21.2 Seq+ 74780 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPX2-COX4I2 TPX2 chr20 30327424 - COX4I2 chr20 30232571 + Exonic hg19 CESC TCGA-LP-A7HU-01A 91 58 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 74781 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPX2-DEFB118 TPX2 chr20 30359485 - DEFB118 chr20 29960660 + Exonic hg19 UCS TCGA-N5-A4RD-01A 96 29 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 74782 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPX2-DEFB118 TPX2 chr20 30327424 - DEFB118 chr20 29960660 + Exonic hg19 CESC TCGA-VS-A9UP-01A 3 2 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 74783 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPX2-DEFB123 TPX2 chr20 30330450 - DEFB123 chr20 30037832 + Exonic hg19 BRCA TCGA-AN-A04A-01A 6 1 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 74784 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPX2-DEFB123 TPX2 chr20 30359485 - DEFB123 chr20 30037832 + Exonic hg19 UCEC TCGA-EO-A1Y7-01A 3 4 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 74785 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPX2-DEFB123 TPX2 chr20 30371724 - DEFB123 chr20 30037832 + Exonic hg19 UCS TCGA-N5-A4RT-01A 310 108 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 74786 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPX2-DEFB123 TPX2 chr20 30330450 - DEFB123 chr20 30037832 + Exonic hg19 TGCT TCGA-VF-A8AA-01A 64 27 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 74787 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPX2-DUSP15 TPX2 chr20 30347982 - DUSP15 chr20 30438479 - Exonic hg19 HNSC TCGA-CV-7421-01A 8 6 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 74788 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPX2-EYS TPX2 chr20 30347982 - EYS chr6 64791895 - Exonic hg19 LUSC TCGA-60-2706-01A 4 2 In-Frame Inter-chr q11.21 q12 Seq+ 74789 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPX2-HM13 TPX2 chr20 30330450 - HM13 chr20 30154013 + Exonic hg19 UCEC TCGA-B5-A3FH-01A 90 25 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 74790 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPX2-HM13 TPX2 chr20 30327424 - HM13 chr20 30115287 + Exonic hg19 BLCA TCGA-GC-A3I6-01A 468 549 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 74791 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPX2-MECOM TPX2 chr20 30330450 - MECOM chr3 168861620 - Exonic hg19 UCEC TCGA-PG-A7D5-01A 2 5 5'UTR-5'UTR Inter-chr q11.21 q26.2 Transcription factor Seq+ 74792 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPX2-RALY TPX2 chr20 30366787 - RALY chr20 32659872 + Exonic hg19 HNSC TCGA-CV-6959-01A 73 31 CDS-5'UTR Intra-chr q11.21 q11.22 Seq+ 74793 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPX2-REM1 TPX2 chr20 30347982 - REM1 chr20 30071962 + Exonic hg19 COAD TCGA-D5-6531-01A 4 4 In-Frame Intra-chr q11.21 q11.21 Seq+ 74794 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPX2-REM1 TPX2 chr20 30345385 - REM1 chr20 30070090 + Exonic hg19 BLCA TCGA-DK-A3IV-01A 21 24 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 74795 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TPX2-UNC5D TPX2 chr20 30330450 - UNC5D chr8 35406810 + Exonic hg19 HNSC TCGA-CN-6992-01A 6 7 5'UTR-CDS Inter-chr q11.21 p12 Tumor suppressor gene Seq+ 74796 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRA2A-AC006465.3 TRA2A chr7 23571408 - AC006465.3 chr7 7712940 + Exonic hg19 BRCA TCGA-AC-A2QH-01B 11 6 Out-of-frame Intra-chr p15.3 74797 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRA2A-AQP1 TRA2A chr7 23571408 - AQP1 chr7 30961681 + Exonic hg19 CESC TCGA-EK-A2PM-01A 129 62 In-Frame Intra-chr p15.3 p14.3 Seq+ 74798 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRA2A-EPDR1 TRA2A chr7 23571408 - EPDR1 chr7 37988442 + Exonic hg19 LUAD TCGA-86-7954-01A 29 44 Out-of-frame Intra-chr p15.3 p14.1 Seq+ 74799 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRA2A-HECW1 TRA2A chr7 23561326 - HECW1 chr7 43283474 + Exonic hg19 BRCA TCGA-EW-A3U0-01A 12 17 CDS-5'UTR Intra-chr p15.3 p14.1 Seq+ 74800 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRA2A-THADA TRA2A chr7 23545365 - THADA chr2 43460021 - Exonic hg19 THCA TCGA-ET-A3DV-01A 3 7 In-Frame Inter-chr p15.3 p21 Seq+ 74801 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRA2B-FBXO21 TRA2B chr3 185655613 - FBXO21 chr12 117593753 - Exonic hg19 UCS TCGA-N7-A4Y5-01A 3 1 Out-of-frame Inter-chr q27.2 q24.22 Seq+ 74802 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRA2B-HRH4 TRA2B chr3 185655613 - HRH4 chr18 22048752 + Exonic hg19 HNSC TCGA-QK-A64Z-01A 20 12 Out-of-frame Inter-chr q27.2 q11.2 Seq+ 74803 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRA2B-LEPREL1 TRA2B chr3 185655613 - LEPREL1 chr3 189681887 - Exonic hg19 UCS TCGA-ND-A4WF-01A 38 12 In-Frame Intra-chr q27.2 Seq+ 74804 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRABD-DDR2 TRABD chr22 50624405 - DDR2 chr1 162625001 + Exonic hg19 HNSC TCGA-CV-7422-01A 5 3 5'UTR-5'UTR Inter-chr q13.33 q23.3 TK:DDR Oncogene Tumor suppressor gene Seq+ 74805 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRADD-SLC12A1 TRADD chr16 67193741 - SLC12A1 chr15 48548008 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 23 97 5'UTR-CDS Inter-chr q22.1 q21.1 Seq+ 74806 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAF2-CACNA1B TRAF2 chr9 139794972 - CACNA1B chr9 140967940 + Exonic hg19 BLCA TCGA-SY-A9G0-01A 2 2 Out-of-frame Intra-chr q34.3 Tumor suppressor gene q34.3 Seq+ 74807 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAF2-MAMDC4 TRAF2 chr9 139804446 - MAMDC4 chr9 139748663 + Exonic hg19 LIHC TCGA-BC-A3KG-01A 35 15 Out-of-frame Intra-chr q34.3 Tumor suppressor gene q34.3 Seq+ 74808 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAF3-BMP3 TRAF3 chr14 103296809 - BMP3 chr4 81966892 + Exonic hg19 LUSC TCGA-39-5030-01A 35 12 5'UTR-5'UTR Inter-chr q32.32 q21.21 Seq+ 74809 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAF3-CDC42BPB TRAF3 chr14 103296809 - CDC42BPB chr14 103450093 - Exonic hg19 HNSC TCGA-CN-4735-01A 14 4 5'UTR-CDS Intra-chr q32.32 q32.32 Seq+ 74810 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAF3-ITPK1 TRAF3 chr14 103342862 - ITPK1 chr14 93424711 - Exonic hg19 PCPG TCGA-S7-A7WM-01A 89 75 In-Frame Intra-chr q32.32 Seq+ 74811 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAF3-MYO16 TRAF3 chr14 103352606 - MYO16 chr13 109318234 + Exonic hg19 BRCA TCGA-B6-A400-01A 38 17 Out-of-frame Inter-chr q32.32 Seq+ 74812 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAF3-RCOR1 TRAF3 chr14 103342862 - RCOR1 chr14 103173688 + Exonic hg19 BRCA TCGA-E9-A244-01A 4 8 In-Frame Intra-chr q32.32 q32.31 Seq+ 74813 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAF3-SFXN1 TRAF3 chr14 103296809 - SFXN1 chr5 174919098 + Exonic hg19 CESC TCGA-C5-A8XH-01A 7 5 5'UTR-5'UTR Inter-chr q32.32 q35.2 Seq+ 74814 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAF3-WDR20 TRAF3 chr14 103369766 - WDR20 chr14 102661275 + Exonic hg19 UCS TCGA-N5-A4RT-01A 8 7 Out-of-frame Intra-chr q32.32 q32.31 Seq+ 74815 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAF3-WDR20 TRAF3 chr14 103338305 - WDR20 chr14 102661275 + Exonic hg19 STAD TCGA-VQ-A8PM-01A 2 24 In-Frame Intra-chr q32.32 q32.31 Seq+ 74816 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAF3IP1-GALNTL5 TRAF3IP1 chr2 239258049 - GALNTL5 chr7 151716731 + Exonic hg19 OV TCGA-31-1951-01A 2 4 Out-of-frame Inter-chr q37.3 q36.1 Seq+ 74817 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAF3IP2-FYN TRAF3IP2 chr6 111926979 - FYN chr6 111995833 - Exonic hg19 LUSC TCGA-85-8580-01A 2 1 5'UTR-CDS Intra-chr q21 q21 TK:Src Seq+ 74818 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAF3IP2-FYN TRAF3IP2 chr6 111887647 - FYN chr6 111995833 - Exonic hg19 UCEC TCGA-D1-A3DG-01A 40 16 Out-of-frame Intra-chr q21 q21 TK:Src Seq+ 74819 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAF3IP2-KIAA1324 TRAF3IP2 chr6 111896846 - KIAA1324 chr1 109727667 + Exonic hg19 PRAD TCGA-KK-A8I4-01A 5 5 In-Frame Inter-chr q21 p13.3 Seq+ 74820 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAF4-FASN TRAF4 chr17 27071273 - FASN chr17 80038798 - Exonic hg19 LGG TCGA-QH-A6CV-01A 14 3 Out-of-frame Intra-chr q11.2 q25.3 Seq+ 74821 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAF7-LRRC1 TRAF7 chr16 2215937 - LRRC1 chr6 53743791 + Exonic hg19 LUSC TCGA-85-A4QR-01A 123 79 In-Frame Inter-chr p13.3 Oncogene p12.1 Seq+ 74822 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAF7-MAPK8IP3 TRAF7 chr16 2214002 - MAPK8IP3 chr16 1816905 + Exonic hg19 BLCA TCGA-FD-A6TD-01A 35 44 Out-of-frame Intra-chr p13.3 Oncogene p13.3 Seq+ 74823 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAF7-WDR24 TRAF7 chr16 2205859 - WDR24 chr16 737739 - Exonic hg19 LAML TCGA-AB-2857-03A 9 2 5'UTR-CDS Intra-chr p13.3 Oncogene p13.3 74824 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAK1-RAF1 TRAK1 chr3 42235390 - RAF1 chr3 12641914 - Exonic hg19 SKCM TCGA-EE-A2MI-06A 68 46 In-Frame Intra-chr p22.1 p25.2 TKL:RAF Oncogene Seq+ 74825 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAM1-CLVS1 TRAM1 chr8 71512254 - CLVS1 chr8 62289164 + Exonic hg19 BRCA TCGA-C8-A138-01A 9 15 Out-of-frame Intra-chr q13.3 q12.2 Seq+ 74826 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAM1-ZFPM2 TRAM1 chr8 71506741 - ZFPM2 chr8 106646474 + Exonic hg19 BRCA TCGA-A8-A097-01A 64 54 In-Frame Intra-chr q13.3 q22.3 Transcription factor Seq+ 74827 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAM2-HCRTR2 TRAM2 chr6 52441594 - HCRTR2 chr6 55142178 + Exonic hg19 ACC TCGA-P6-A5OG-01A 4 2 In-Frame Intra-chr p12.2 p12.1 Seq+ 74828 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAP1-CREBBP TRAP1 chr16 3740828 - CREBBP chr16 3799684 - Exonic hg19 LUSC TCGA-43-8115-01A 3 2 Out-of-frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene 74829 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAPPC10-AGPAT3 TRAPPC10 chr21 45483666 - AGPAT3 chr21 45379515 + Exonic hg19 LIHC TCGA-DD-A3A5-01A 3 1 CDS-5'UTR Intra-chr q22.3 q22.3 Seq+ 74830 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAPPC10-AGPAT3 TRAPPC10 chr21 45475774 - AGPAT3 chr21 45379515 + Exonic hg19 ACC TCGA-OR-A5KY-01A 2 1 CDS-5'UTR Intra-chr q22.3 q22.3 Seq+ 74831 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAPPC10-BRWD1 TRAPPC10 chr21 45432441 - BRWD1 chr21 40630598 - Exonic hg19 BRCA TCGA-E2-A1LG-01A 30 54 In-Frame Intra-chr q22.3 q22.2 Seq+ 74832 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAPPC10-GRID1 TRAPPC10 chr21 45432441 - GRID1 chr10 87628937 - Exonic hg19 OV TCGA-13-0893-01B 2 7 Out-of-frame Inter-chr q22.3 q23.2 Seq+ 74833 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAPPC10-GRIK1 TRAPPC10 chr21 45432441 - GRIK1 chr21 31066382 - Exonic hg19 LUAD TCGA-69-8453-01A 8 5 In-Frame Intra-chr q22.3 q21.3 Seq+ 74834 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAPPC10-MDS2 TRAPPC10 chr21 45432441 - MDS2 chr1 23966170 + Exonic hg19 HNSC TCGA-CQ-A4CH-01A 2 1 CDS-5'UTR Inter-chr q22.3 p36.12 Seq+ 74835 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAPPC10-UBASH3A TRAPPC10 chr21 45504144 - UBASH3A chr21 43833133 + Exonic hg19 PRAD TCGA-EJ-A46G-01A 2 6 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 74836 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAPPC2-ATP2B3 TRAPPC2 chrX 13737990 - ATP2B3 chrX 152845436 + Exonic hg19 LGG TCGA-TQ-A8XE-01A 14 39 In-Frame Intra-chr p22.2 q28 Seq+ 74837 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAPPC2-ATP2B3 TRAPPC2 chrX 13737990 - ATP2B3 chrX 152845436 + Exonic hg19 LGG TCGA-TQ-A8XE-02A 8 30 In-Frame Intra-chr p22.2 q28 Seq+ 74838 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAPPC8-ANK3 TRAPPC8 chr18 29522571 - ANK3 chr10 61965648 - Exonic hg19 LUAD TCGA-55-6971-01A 46 26 Out-of-frame Inter-chr q12.1 q21.2 Seq+ 74839 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAPPC8-DOK6 TRAPPC8 chr18 29496235 - DOK6 chr18 67508480 + Exonic hg19 BRCA TCGA-D8-A1XZ-01A 2 1 Out-of-frame Intra-chr q12.1 q22.2 74840 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAPPC8-RNF125 TRAPPC8 chr18 29511292 - RNF125 chr18 29617079 + Exonic hg19 LUSC TCGA-66-2768-01A 4 2 Out-of-frame Intra-chr q12.1 q12.1 74841 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAPPC8-SS18 TRAPPC8 chr18 29487423 - SS18 chr18 23637706 - Exonic hg19 BRCA TCGA-A7-A4SE-01A 24 9 In-Frame Intra-chr q12.1 q11.2 Seq+ 74842 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAPPC9-AC068353.1 TRAPPC9 chr8 140998934 - AC068353.1 chr8 8176818 - Exonic hg19 STAD TCGA-HF-7132-01A 2 9 Out-of-frame Intra-chr q24.3 74843 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAPPC9-COL22A1 TRAPPC9 chr8 141370149 - COL22A1 chr8 139768072 - Exonic hg19 BRCA TCGA-E2-A15H-01A 28 13 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 74844 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAPPC9-EIF2C2 TRAPPC9 chr8 141460889 - EIF2C2 chr8 141542714 - Exonic hg19 STAD TCGA-BR-4357-01A 4 2 Out-of-frame Intra-chr q24.3 74845 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAPPC9-EIF2C2 TRAPPC9 chr8 141467738 - EIF2C2 chr8 141551457 - Exonic hg19 BLCA TCGA-DK-A3X2-01A 8 2 5'UTR-CDS Intra-chr q24.3 74846 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAPPC9-KIAA0528 TRAPPC9 chr8 141407719 - KIAA0528 chr12 22680826 - Exonic hg19 LUAD TCGA-69-8255-01A 12 9 In-Frame Inter-chr q24.3 74847 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAPPC9-LIMA1 TRAPPC9 chr8 140998934 - LIMA1 chr12 50625493 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 3 2 In-Frame Inter-chr q24.3 q13.12 Tumor suppressor gene 74848 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAPPC9-PSKH2 TRAPPC9 chr8 141231558 - PSKH2 chr8 87060996 - Exonic hg19 LUAD TCGA-78-7153-01A 15 7 In-Frame Intra-chr q24.3 q21.3 CAMK:PSK Seq+ 74849 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAPPC9-PTK2 TRAPPC9 chr8 141415676 - PTK2 chr8 141696793 - Exonic hg19 HNSC TCGA-CV-6953-01A 11 4 In-Frame Intra-chr q24.3 q24.3 Seq+ 74850 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAPPC9-SLC30A8 TRAPPC9 chr8 141436714 - SLC30A8 chr8 118159058 + Exonic hg19 HNSC TCGA-CV-A45X-01A 3 1 CDS-5'UTR Intra-chr q24.3 q24.11 74851 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRAPPC9-SLC45A4 TRAPPC9 chr8 141407719 - SLC45A4 chr8 142231864 - Exonic hg19 BRCA TCGA-A2-A25E-01A 2 2 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 74852 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRERF1-AIF1 TRERF1 chr6 42268376 - AIF1 chr6 31583298 + Exonic hg19 LUAD TCGA-MN-A4N1-01A 2 1 5'UTR-5'UTR Intra-chr p21.1 Transcription factor Tumor suppressor gene 74853 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRERF1-GNMT TRERF1 chr6 42330685 - GNMT chr6 42929950 + Exonic hg19 LUAD TCGA-50-6591-01A 3 2 5'UTR-CDS Intra-chr p21.1 Transcription factor p21.1 Tumor suppressor gene Seq+ 74854 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRERF1-GPR111 TRERF1 chr6 42418915 - GPR111 chr6 47641127 + Exonic hg19 SARC TCGA-DX-A6BH-01A 8 15 5'UTR-5'UTR Intra-chr p21.1 Transcription factor Seq+ 74855 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRERF1-OR2H1 TRERF1 chr6 42418915 - OR2H1 chr6 29426231 + Exonic hg19 KIRC TCGA-A3-3313-01A 3 2 5'UTR-5'UTR Intra-chr p21.1 Transcription factor Seq+ 74856 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRERF1-SUPT3H TRERF1 chr6 42210986 - SUPT3H chr6 44988369 - Exonic hg19 SARC TCGA-QQ-A5VC-01A 58 29 In-Frame Intra-chr p21.1 Transcription factor p21.1 Seq+ 74857 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRERF1-TMEM132C TRERF1 chr6 42418915 - TMEM132C chr12 129100697 + Exonic hg19 BRCA TCGA-E2-A1IO-01A 6 1 5'UTR-CDS Inter-chr p21.1 Transcription factor q24.32 Seq+ 74858 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRERF1-VARS2 TRERF1 chr6 42330685 - VARS2 chr6 30893321 + Exonic hg19 BRCA TCGA-BH-A0HY-01A 18 5 5'UTR-CDS Intra-chr p21.1 Transcription factor Seq+ 74859 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRHDE-ANKS1B TRHDE chr12 72956820 - ANKS1B chr12 99145300 - Exonic hg19 SARC TCGA-DX-A23V-01A 7 1 Out-of-frame Intra-chr q21.1 q23.1 Seq+ 74860 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRHDE-C12orf75 TRHDE chr12 72680734 - C12orf75 chr12 105789410 + Exonic hg19 SARC TCGA-DX-A3LS-01A 9 7 Out-of-frame Intra-chr q21.1 q23.3 Seq+ 74861 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRHDE-DPY19L2 TRHDE chr12 72680734 - DPY19L2 chr12 63976305 - Exonic hg19 SARC TCGA-DX-A23Z-01A 6 4 In-Frame Intra-chr q21.1 q14.2 Seq+ 74862 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRHDE-NUP107 TRHDE chr12 72962436 - NUP107 chr12 69128488 + Exonic hg19 SKCM TCGA-D9-A1X3-01A 2 3 Out-of-frame Intra-chr q21.1 q15 74863 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRHDE-NUP107 TRHDE chr12 72962436 - NUP107 chr12 69128488 + Exonic hg19 SKCM TCGA-D9-A1X3-06A 2 3 Out-of-frame Intra-chr q21.1 q15 74864 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRHDE-SFSWAP TRHDE chr12 72969322 - SFSWAP chr12 132249001 + Exonic hg19 SARC TCGA-DX-AB2H-01A 18 4 Out-of-frame Intra-chr q21.1 q24.33 Seq+ 74865 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRHDE-TBC1D15 TRHDE chr12 72771901 - TBC1D15 chr12 72287002 + Exonic hg19 SARC TCGA-DX-A2IZ-01A 10 7 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 74866 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIB1-NSMCE2 TRIB1 chr8 126445851 - NSMCE2 chr8 126369461 + Exonic hg19 LUAD TCGA-55-7903-01A 4 3 Out-of-frame Intra-chr q24.13 q24.13 Seq+ 74867 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIB1-NSMCE2 TRIB1 chr8 126443504 - NSMCE2 chr8 126369461 + Exonic hg19 BRCA TCGA-B6-A0IJ-01A 14 13 Out-of-frame Intra-chr q24.13 q24.13 Seq+ 74868 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIB1-SAE1 TRIB1 chr8 126443504 - SAE1 chr19 47706928 + Exonic hg19 BLCA TCGA-XF-AAN0-01A 6 17 Out-of-frame Inter-chr q24.13 q13.32 Seq+ 74869 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIB1-SLC25A32 TRIB1 chr8 126445851 - SLC25A32 chr8 104420012 - Exonic hg19 BRCA TCGA-E2-A105-01A 5 6 Out-of-frame Intra-chr q24.13 q22.3 Seq+ 74870 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIB3-DEFB125 TRIB3 chr20 368945 - DEFB125 chr20 76646 + Exonic hg19 LUAD TCGA-75-6211-01A 8 3 Out-of-frame Intra-chr p13 p13 74871 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIB3-SLC24A3 TRIB3 chr20 372223 - SLC24A3 chr20 19496132 + Exonic hg19 CHOL TCGA-3X-AAVB-01A 10 3 Out-of-frame Intra-chr p13 p11.23 Seq+ 74872 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM11-SLC2A5 TRIM11 chr1 228588665 - SLC2A5 chr1 9098565 - Exonic hg19 BRCA TCGA-A8-A09E-01A 26 26 In-Frame Intra-chr q42.13 p36.23 Seq+ 74873 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM2-ARFIP1 TRIM2 chr4 154125712 - ARFIP1 chr4 153831216 + Exonic hg19 OV TCGA-13-1506-01A 4 1 In-Frame Intra-chr q31.3 q31.3 Seq+ 74874 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM2-ARFIP1 TRIM2 chr4 154125712 - ARFIP1 chr4 153750777 + Exonic hg19 BRCA TCGA-B6-A0X1-01A 12 8 5'UTR-5'UTR Intra-chr q31.3 q31.3 Seq+ 74875 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM2-ARFIP1 TRIM2 chr4 154191671 - ARFIP1 chr4 153784758 + Exonic hg19 SKCM TCGA-FS-A1Z4-06A 9 13 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 74876 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM2-FAM71F1 TRIM2 chr4 154217188 - FAM71F1 chr7 128353977 + Exonic hg19 UCEC TCGA-PG-A914-01A 40 5 Out-of-frame Inter-chr q31.3 q32.1 Seq+ 74877 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM2-GALNTL6 TRIM2 chr4 154237151 - GALNTL6 chr4 173232765 + Exonic hg19 ESCA TCGA-ZR-A9CJ-01B 2 6 Out-of-frame Intra-chr q31.3 q34.1 74878 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM2-LRBA TRIM2 chr4 154073764 - LRBA chr4 151738409 - Exonic hg19 SKCM TCGA-FW-A3R5-06A 109 56 5'UTR-CDS Intra-chr q31.3 q31.3 Seq+ 74879 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM2-WDR37 TRIM2 chr4 154125712 - WDR37 chr10 1149542 + Exonic hg19 LGG TCGA-E1-5304-01A 8 1 In-Frame Inter-chr q31.3 p15.3 74880 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM24-BRAF TRIM24 chr7 138239609 - BRAF chr7 140550012 - Exonic hg19 LIHC TCGA-DD-AACL-01A 9 2 In-Frame Intra-chr q33 Oncogene Tumor suppressor gene q34 TKL:RAF Oncogene Pub Seq+ 74881 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM24-BRAF TRIM24 chr7 138255748 - BRAF chr7 140550012 - Exonic hg19 READ TCGA-F5-6464-01A 7 4 In-Frame Intra-chr q33 Oncogene Tumor suppressor gene q34 TKL:RAF Oncogene Pub Seq+ 74882 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM24-NTRK2 TRIM24 chr7 138258387 - NTRK2 chr9 87482158 + Exonic hg19 LUAD TCGA-55-8091-01A 13 9 In-Frame Inter-chr q33 Oncogene Tumor suppressor gene q21.33 Oncogene Seq+ 74883 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM24-SVOPL TRIM24 chr7 138258387 - SVOPL chr7 138281275 - Exonic hg19 BRCA TCGA-C8-A1HM-01A 113 62 Out-of-frame Intra-chr q33 Oncogene Tumor suppressor gene q34 Seq+ 74884 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM24-ULK4 TRIM24 chr7 138189153 - ULK4 chr3 41497086 - Exonic hg19 BRCA TCGA-A8-A08R-01A 5 2 In-Frame Inter-chr q33 Oncogene Tumor suppressor gene p22.1 Other:ULK 74885 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM25-MSI2 TRIM25 chr17 54972704 - MSI2 chr17 55607037 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 11 5 Out-of-frame Intra-chr q22 q22 Seq+ 74886 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM25-TBX4 TRIM25 chr17 54972704 - TBX4 chr17 59560258 + Exonic hg19 BRCA TCGA-AO-A0JM-01A 14 1 Out-of-frame Intra-chr q22 q23.2 Transcription factor Seq+ 74887 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM26-DHX16 TRIM26 chr6 30181082 - DHX16 chr6 30628019 - Exonic hg19 ESCA TCGA-JY-A939-01A 24 495 5'UTR-CDS Intra-chr Seq+ 74888 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM26-TJAP1 TRIM26 chr6 30181082 - TJAP1 chr6 43465619 + Exonic hg19 SKCM TCGA-FS-A1ZN-01A 14 18 5'UTR-5'UTR Intra-chr p21.1 Seq+ 74889 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM27-PTPRR TRIM27 chr6 28879473 - PTPRR chr12 71050597 - Exonic hg19 SARC TCGA-DX-A23Z-01A 75 93 In-Frame Inter-chr q15 Seq+ 74890 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM27-RET TRIM27 chr6 28887789 - RET chr10 43612032 + Exonic hg19 THCA TCGA-CE-A481-01A 70 25 In-Frame Inter-chr q11.21 TK:Ret Oncogene KB Pub Seq+ 74891 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM28-ZBTB45 TRIM28 chr19 59056464 - ZBTB45 chr19 59029040 - Exonic hg19 LUSC TCGA-21-1082-01A 26 16 CDS-5'UTR Intra-chr q13.43 q13.43 Transcription factor Seq+ 74892 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM29-PAK1 TRIM29 chr11 120055918 - PAK1 chr11 77034405 - Exonic hg19 LIHC TCGA-2Y-A9H0-01A 80 63 5'UTR-CDS Intra-chr q23.3 q14.1 STE:STE20 Seq+ 74893 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM32-MELK TRIM32 chr9 119449660 - MELK chr9 36607572 + Exonic hg19 BRCA TCGA-D8-A27R-01A 6 5 5'UTR-5'UTR Intra-chr q33.1 Tumor suppressor gene p13.2 CAMK:CAMKL Seq+ 74894 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM33-BCAR3 TRIM33 chr1 115053172 - BCAR3 chr1 94171698 - Exonic hg19 READ TCGA-AG-4021-01A 11 15 CDS-5'UTR Intra-chr p13.2 Oncogene p22.1 Seq+ 74895 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM33-COL24A1 TRIM33 chr1 115005726 - COL24A1 chr1 86334309 - Exonic hg19 BRCA TCGA-AN-A0FV-01A 3 3 Out-of-frame Intra-chr p13.2 Oncogene p22.3 74896 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM33-CSDE1 TRIM33 chr1 114945382 - CSDE1 chr1 115282511 - Exonic hg19 PRAD TCGA-CH-5750-01A 5 9 In-Frame Intra-chr p13.2 Oncogene p13.2 Seq+ 74897 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM33-CSDE1 TRIM33 chr1 114945382 - CSDE1 chr1 115282511 - Exonic hg19 PRAD TCGA-CH-5751-01A 12 12 In-Frame Intra-chr p13.2 Oncogene p13.2 Seq+ 74898 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM33-CSMD2 TRIM33 chr1 114948032 - CSMD2 chr1 34128692 - Exonic hg19 LUSC TCGA-52-7809-01A 14 3 In-Frame Intra-chr p13.2 Oncogene p35.1 Seq+ 74899 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM33-RET TRIM33 chr1 114964058 - RET chr10 43612032 + Exonic hg19 LUAD TCGA-55-6543-01A 21 20 In-Frame Inter-chr p13.2 Oncogene q11.21 TK:Ret Oncogene KB Pub Seq+ 74900 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM33-SHC1 TRIM33 chr1 114963002 - SHC1 chr1 154942675 - Exonic hg19 PCPG TCGA-QR-A70X-01A 5 6 CDS-5'UTR Intra-chr p13.2 Oncogene q21.3 Seq+ 74901 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM35-CCNB1IP1 TRIM35 chr8 27155981 - CCNB1IP1 chr14 20797532 - Exonic hg19 BLCA TCGA-SY-A9G0-01A 10 5 CDS-5'UTR Inter-chr p21.2 Tumor suppressor gene q11.2 Seq+ 74902 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM35-GSR TRIM35 chr8 27151597 - GSR chr8 30569605 - Exonic hg19 BRCA TCGA-BH-A0DG-01A 2 1 In-Frame Intra-chr p21.2 Tumor suppressor gene p12 74903 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM35-PEBP4 TRIM35 chr8 27168318 - PEBP4 chr8 22785233 - Exonic hg19 STAD TCGA-VQ-A91N-01A 3 16 CDS-5'UTR Intra-chr p21.2 Tumor suppressor gene p21.3 Seq+ 74904 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM36-HEXB TRIM36 chr5 114505305 - HEXB chr5 73985153 + Exonic hg19 BRCA TCGA-AO-A0J3-01A 15 18 3'UTR-CDS Intra-chr q22.3 q13.3 Seq+ 74905 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM36-MCTP1 TRIM36 chr5 114480295 - MCTP1 chr5 94353188 - Exonic hg19 COAD TCGA-DM-A280-01A 3 2 In-Frame Intra-chr q22.3 q15 Seq+ 74906 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM37-C17orf67 TRIM37 chr17 57119174 - C17orf67 chr17 54902214 - Exonic hg19 BRCA TCGA-UU-A93S-01A 7 11 CDS-5'UTR Intra-chr q22 q22 Seq+ 74907 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM37-DNAH17 TRIM37 chr17 57161363 - DNAH17 chr17 76441762 - Exonic hg19 STAD TCGA-BR-8590-01A 3 4 In-Frame Intra-chr q22 q25.3 Seq+ 74908 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM37-MED13 TRIM37 chr17 57148184 - MED13 chr17 60130066 - Exonic hg19 CESC TCGA-VS-A8EJ-01A 40 55 Out-of-frame Intra-chr q22 q23.2 Seq+ 74909 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM37-MSI2 TRIM37 chr17 57148184 - MSI2 chr17 55478740 + Exonic hg19 LIHC TCGA-CC-5258-01A 2 2 Out-of-frame Intra-chr q22 q22 Seq+ 74910 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM37-PCTP TRIM37 chr17 57183802 - PCTP chr17 53844696 + Exonic hg19 BRCA TCGA-EW-A2FV-01A 14 7 In-Frame Intra-chr q22 q22 Seq+ 74911 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM37-SKA2 TRIM37 chr17 57183802 - SKA2 chr17 57189706 - Exonic hg19 BRCA TCGA-GI-A2C9-01A 3 2 In-Frame Intra-chr q22 q22 74912 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM37-TUBD1 TRIM37 chr17 57181654 - TUBD1 chr17 57937785 - Exonic hg19 BRCA TCGA-BH-A0HB-01A 9 16 Out-of-frame Intra-chr q22 q23.1 Seq+ 74913 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM4-TAF6 TRIM4 chr7 99500841 - TAF6 chr7 99707696 - Exonic hg19 BRCA TCGA-BH-A1F6-01A 14 10 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 74914 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM4-ZCWPW1 TRIM4 chr7 99516632 - ZCWPW1 chr7 100007167 - Exonic hg19 STAD TCGA-VQ-A925-01A 4 11 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 74915 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM41-ASB9 TRIM41 chr5 180651812 - ASB9 chrX 15277067 - Exonic hg19 LUAD TCGA-78-7146-01A 3 4 Out-of-frame Inter-chr q35.3 p22.2 Seq+ 74916 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM44-CCDC86 TRIM44 chr11 35706884 - CCDC86 chr11 60617413 + Exonic hg19 PAAD TCGA-2J-AABP-01A 16 11 In-Frame Intra-chr p13 q12.2 Seq+ 74917 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM48-ADAMTS16 TRIM48 chr11 55029787 - ADAMTS16 chr5 5262770 + Exonic hg19 SKCM TCGA-D3-A2JB-06A 4 9 Out-of-frame Inter-chr q11 p15.32 Seq+ 74918 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM65-SRP68 TRIM65 chr17 73887894 - SRP68 chr17 74053624 - Exonic hg19 LUSC TCGA-60-2706-01A 6 4 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 74919 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIM71-CNOT10 TRIM71 chr3 32860424 - CNOT10 chr3 32814949 + Exonic hg19 TGCT TCGA-XY-A8S3-01B 3 3 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 74920 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIO-ADAMTS12 TRIO chr5 14381361 - ADAMTS12 chr5 33881585 - Exonic hg19 SKCM TCGA-EB-A44Q-06A 84 40 Out-of-frame Intra-chr p15.2 p13.2 Seq+ 74921 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIO-ATAD1 TRIO chr5 14381361 - ATAD1 chr10 89574369 - Exonic hg19 PRAD TCGA-EJ-5495-01A 2 3 CDS-5'UTR Inter-chr p15.2 74922 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIO-CDH18 TRIO chr5 14420130 - CDH18 chr5 19612710 - Exonic hg19 SARC TCGA-DX-AB2G-01A 13 4 In-Frame Intra-chr p15.2 p14.3 Seq+ 74923 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIO-CLIC5 TRIO chr5 14420130 - CLIC5 chr6 45922981 - Exonic hg19 SKCM TCGA-EB-A44Q-06A 5 6 Out-of-frame Inter-chr p15.2 p21.1 Seq+ 74924 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIO-CLNK TRIO chr5 14401173 - CLNK chr4 10586579 - Exonic hg19 SKCM TCGA-D9-A1X3-01A 3 4 Out-of-frame Inter-chr p15.2 p16.1 Seq+ 74925 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIO-CLNK TRIO chr5 14401173 - CLNK chr4 10586579 - Exonic hg19 SKCM TCGA-D9-A1X3-06A 3 4 Out-of-frame Inter-chr p15.2 p16.1 Seq+ 74926 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIO-DAP TRIO chr5 14420130 - DAP chr5 10748383 - Exonic hg19 SARC TCGA-DX-AB2X-01A 204 115 In-Frame Intra-chr p15.2 p15.2 74927 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIO-DNAH5 TRIO chr5 14391099 - DNAH5 chr5 13931353 - Exonic hg19 LUAD TCGA-55-7283-01A 9 2 In-Frame Intra-chr p15.2 p15.2 Seq+ 74928 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIO-FAM53B TRIO chr5 14336836 - FAM53B chr10 126312173 - Exonic hg19 BRCA TCGA-LD-A7W5-01A 5 6 In-Frame Inter-chr p15.2 q26.13 Seq+ 74929 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIO-FBXL7 TRIO chr5 14391099 - FBXL7 chr5 15616092 + Exonic hg19 LUSC TCGA-46-3765-01A 9 8 Out-of-frame Intra-chr p15.2 p15.1 Seq+ 74930 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIO-IFT52 TRIO chr5 14502766 - IFT52 chr20 42232400 + Exonic hg19 BRCA TCGA-AO-A03O-01A 9 8 Out-of-frame Inter-chr p15.2 q13.12 Seq+ 74931 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIO-IQUB TRIO chr5 14304701 - IQUB chr7 123097620 - Exonic hg19 PRAD TCGA-CH-5741-01A 56 43 In-Frame Inter-chr p15.2 q31.32 Seq+ 74932 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIO-KDSR TRIO chr5 14297372 - KDSR chr18 61006116 - Exonic hg19 COAD TCGA-AY-6196-01A 2 2 In-Frame Inter-chr p15.2 q21.33 74933 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIO-LIFR TRIO chr5 14143991 - LIFR chr5 38489347 - Exonic hg19 SKCM TCGA-EB-A44Q-06A 5 2 In-Frame Intra-chr p15.2 p13.1 Oncogene Tumor suppressor gene Seq+ 74934 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIO-MARCH11 TRIO chr5 14488369 - 2019_ 3_ 11_ chr5 16091190 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 179 107 Out-of-frame Intra-chr p15.2 p15.1 Seq+ 74935 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIO-PPP2R5E TRIO chr5 14280545 - PPP2R5E chr14 63848875 - Exonic hg19 HNSC TCGA-BA-5153-01A 55 23 In-Frame Inter-chr p15.2 q23.2 Seq+ 74936 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIO-SLC9A3 TRIO chr5 14394239 - SLC9A3 chr5 492186 - Exonic hg19 SKCM TCGA-FS-A4F4-06A 13 19 Out-of-frame Intra-chr p15.2 p15.33 Seq+ 74937 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIO-TERT TRIO chr5 14420130 - TERT chr5 1282739 - Exonic hg19 SARC TCGA-DX-A1L3-01A 89 63 In-Frame Intra-chr p15.2 p15.33 Oncogene Seq+ 74938 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIO-TERT TRIO chr5 14406781 - TERT chr5 1282739 - Exonic hg19 SARC TCGA-DX-A2J0-01A 11 6 Out-of-frame Intra-chr p15.2 p15.33 Oncogene Seq+ 74939 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIO-TERT TRIO chr5 14420130 - TERT chr5 1282739 - Exonic hg19 SARC TCGA-DX-A7EF-01A 42 25 In-Frame Intra-chr p15.2 p15.33 Oncogene Seq+ 74940 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIO-UHRF2 TRIO chr5 14143991 - UHRF2 chr9 6420912 + Exonic hg19 LUAD TCGA-75-6207-01A 8 19 Out-of-frame Inter-chr p15.2 p24.1 Tumor suppressor gene Seq+ 74941 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIO-ZNF131 TRIO chr5 14143991 - ZNF131 chr5 43161351 + Exonic hg19 LIHC TCGA-CC-5264-01A 3 5 Out-of-frame Intra-chr p15.2 p12 Transcription factor Seq+ 74942 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIOBP-CDC42EP1 TRIOBP chr22 38097486 - CDC42EP1 chr22 37962079 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 28 17 5'UTR-5'UTR Intra-chr q13.1 q13.1 Seq+ 74943 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIOBP-PES1 TRIOBP chr22 38161824 - PES1 chr22 30988385 - Exonic hg19 UCS TCGA-N9-A4PZ-01A 10 3 3'UTR-3'UTR Intra-chr q13.1 q12.2 Seq+ 74944 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIOBP-UNC13C TRIOBP chr22 38164183 - UNC13C chr15 54914525 + Exonic hg19 LUAD TCGA-64-1678-01A 14 11 Out-of-frame Inter-chr q13.1 q21.3 Seq+ 74945 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIP11-CYP46A1 TRIP11 chr14 92465584 - CYP46A1 chr14 100165803 + Exonic hg19 BRCA TCGA-AO-A0JD-01A 4 3 Out-of-frame Intra-chr q32.12 Oncogene q32.2 Seq+ 74946 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIP12-AGFG1 TRIP12 chr2 230786596 - AGFG1 chr2 228401617 + Exonic hg19 BRCA TCGA-A1-A0SO-01A 15 15 5'UTR-CDS Intra-chr q36.3 q36.3 Seq+ 74947 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIP12-ITM2C TRIP12 chr2 230723488 - ITM2C chr2 231738132 + Exonic hg19 SARC TCGA-DX-A8BX-01A 30 39 Out-of-frame Intra-chr q36.3 q37.1 Seq+ 74948 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIP12-KIF1A TRIP12 chr2 230786596 - KIF1A chr2 241737229 - Exonic hg19 LUSC TCGA-46-6026-01A 14 5 5'UTR-5'UTR Intra-chr q36.3 q37.3 Seq+ 74949 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIP12-MAFF TRIP12 chr2 230786596 - MAFF chr22 38609830 + Exonic hg19 SKCM TCGA-D3-A2JC-06A 6 6 5'UTR-5'UTR Inter-chr q36.3 q13.1 Transcription factor Seq+ 74950 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIP12-SLC16A14 TRIP12 chr2 230723488 - SLC16A14 chr2 230902247 - Exonic hg19 LUAD TCGA-95-A4VP-01A 11 5 In-Frame Intra-chr q36.3 q36.3 Seq+ 74951 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIP12-SLC16A14 TRIP12 chr2 230723488 - SLC16A14 chr2 230902247 - Exonic hg19 KIRC TCGA-BP-4977-01A 16 26 In-Frame Intra-chr q36.3 q36.3 Seq+ 74952 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIP12-SLC16A14 TRIP12 chr2 230723488 - SLC16A14 chr2 230902247 - Exonic hg19 KIRC TCGA-CJ-4923-01A 23 22 In-Frame Intra-chr q36.3 q36.3 Seq+ 74953 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIP12-SLC16A14 TRIP12 chr2 230723488 - SLC16A14 chr2 230902247 - Exonic hg19 CESC TCGA-EA-A97N-01A 5 4 In-Frame Intra-chr q36.3 q36.3 Seq+ 74954 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIP12-SLC16A14 TRIP12 chr2 230723488 - SLC16A14 chr2 230902247 - Exonic hg19 PCPG TCGA-WB-A81S-01A 20 24 In-Frame Intra-chr q36.3 q36.3 Seq+ 74955 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIP12-SLC4A10 TRIP12 chr2 230701564 - SLC4A10 chr2 162820645 + Exonic hg19 BRCA TCGA-BH-A0C7-01B 57 17 Out-of-frame Intra-chr q36.3 q24.2 Seq+ 74956 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIP12-SP110 TRIP12 chr2 230701564 - SP110 chr2 231037675 - Exonic hg19 BRCA TCGA-D8-A1XT-01A 17 9 Out-of-frame Intra-chr q36.3 q37.1 Transcription factor Seq+ 74957 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIP13-ANKRD33B TRIP13 chr5 907308 - ANKRD33B chr5 10618445 + Exonic hg19 STAD TCGA-BR-7959-01A 2 6 In-Frame Intra-chr p15.33 p15.2 74958 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIP13-GPATCH2 TRIP13 chr5 914692 - GPATCH2 chr1 217604707 - Exonic hg19 SARC TCGA-DX-A7EI-01A 2 8 Out-of-frame Inter-chr p15.33 q41 Seq+ 74959 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIT1-ABCA10 TRIT1 chr1 40348990 - ABCA10 chr17 67193263 - Exonic hg19 LIHC TCGA-PD-A5DF-01A 6 1 Out-of-frame Inter-chr p34.2 Tumor suppressor gene q24.3 74960 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIT1-CHI3L2 TRIT1 chr1 40348990 - CHI3L2 chr1 111772474 + Exonic hg19 BRCA TCGA-XX-A89A-01A 93 69 Out-of-frame Intra-chr p34.2 Tumor suppressor gene p13.2 Seq+ 74961 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRIT1-MFSD2A TRIT1 chr1 40348990 - MFSD2A chr1 40422759 + Exonic hg19 KIRC TCGA-EU-5906-01A 26 23 In-Frame Intra-chr p34.2 Tumor suppressor gene p34.2 Tumor suppressor gene Seq+ 74962 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRMT11-HINT3 TRMT11 chr6 126307768 - HINT3 chr6 126288033 + Exonic hg19 LUAD TCGA-05-5423-01A 12 6 In-Frame Intra-chr q22.32 q22.32 Seq+ 74963 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRMT11-HINT3 TRMT11 chr6 126307768 - HINT3 chr6 126288033 + Exonic hg19 HNSC TCGA-CV-5434-01A 8 3 In-Frame Intra-chr q22.32 q22.32 Seq+ 74964 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRMT11-ICK TRMT11 chr6 126307768 - ICK chr6 52884157 - Exonic hg19 BRCA TCGA-AN-A0AL-01A 4 2 Out-of-frame Intra-chr q22.32 p12.1 CMGC:RCK Oncogene Seq+ 74965 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRMT11-NCOA7 TRMT11 chr6 126342426 - NCOA7 chr6 126242089 + Exonic hg19 LUAD TCGA-86-8673-01A 14 12 In-Frame Intra-chr q22.32 q22.31 Seq+ 74966 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRMT11-RNF217 TRMT11 chr6 126334247 - RNF217 chr6 125397803 + Exonic hg19 BRCA TCGA-B6-A0X1-01A 5 2 Out-of-frame Intra-chr q22.32 q22.31 Seq+ 74967 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRMT11-RNF217 TRMT11 chr6 126342426 - RNF217 chr6 125330320 + Exonic hg19 BLCA TCGA-FJ-A3Z7-01A 3 1 CDS-5'UTR Intra-chr q22.32 q22.31 Seq+ 74968 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRMT11-SLC16A10 TRMT11 chr6 126314968 - SLC16A10 chr6 111527795 + Exonic hg19 LUAD TCGA-78-7220-01A 2 1 In-Frame Intra-chr q22.32 q21 74969 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRMT11-TPD52L1 TRMT11 chr6 126307768 - TPD52L1 chr6 125541224 + Exonic hg19 BRCA TCGA-S3-AA15-01A 13 15 Out-of-frame Intra-chr q22.32 q22.31 Seq+ 74970 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRMT61A-AMN TRMT61A chr14 103996646 - AMN chr14 103394763 + Exonic hg19 BLCA TCGA-2F-A9KP-01A 14 7 Out-of-frame Intra-chr q32.33 q32.32 Seq+ 74971 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRMT61A-NDUFA12 TRMT61A chr14 103999185 - NDUFA12 chr12 95388033 - Exonic hg19 SARC TCGA-DX-A23Y-01A 62 45 In-Frame Inter-chr q32.33 q22 Seq+ 74972 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRMU-ATXN10 TRMU chr22 46739265 - ATXN10 chr22 46085592 + Exonic hg19 STAD TCGA-RD-A8MW-01A 5 10 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 74973 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRMU-GTSE1 TRMU chr22 46746360 - GTSE1 chr22 46725255 + Exonic hg19 HNSC TCGA-CN-A63W-01A 50 25 In-Frame Intra-chr q13.31 q13.31 Seq+ 74974 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRMU-GTSE1 TRMU chr22 46733841 - GTSE1 chr22 46704047 + Exonic hg19 UCEC TCGA-D1-A3DH-01A 21 7 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 74975 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRMU-PPARA TRMU chr22 46739265 - PPARA chr22 46584620 + Exonic hg19 STAD TCGA-BR-4363-01A 11 5 Out-of-frame Intra-chr q13.31 q13.31 Tumor suppressor gene Transcription factor 74976 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRMU-TMEM184B TRMU chr22 46733841 - TMEM184B chr22 38627340 - Exonic hg19 LIHC TCGA-DD-A3A5-01A 7 1 Out-of-frame Intra-chr q13.31 q13.1 Seq+ 74977 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRMU-TTC38 TRMU chr22 46733841 - TTC38 chr22 46688688 + Exonic hg19 BRCA TCGA-AN-A0AL-01A 51 14 In-Frame Intra-chr q13.31 q13.31 Seq+ 74978 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRNAU1AP-PHACTR4 TRNAU1AP chr1 28880249 - PHACTR4 chr1 28800066 + Exonic hg19 BRCA TCGA-AO-A1KR-01A 2 3 Out-of-frame Intra-chr p35.3 p35.3 Tumor suppressor gene 74979 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRNAU1AP-RCC1 TRNAU1AP chr1 28893925 - RCC1 chr1 28861562 + Exonic hg19 BRCA TCGA-C8-A134-01A 8 7 Out-of-frame Intra-chr p35.3 p35.3 Seq+ 74980 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TROVE2-CACNA1S TROVE2 chr1 193028906 - CACNA1S chr1 201039532 - Exonic hg19 PRAD TCGA-VP-A875-01A 35 37 5'UTR-CDS Intra-chr q31.2 q32.1 Seq+ 74981 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRPC1-PTPRG TRPC1 chr3 142467302 - PTPRG chr3 61734552 + Exonic hg19 KIRC TCGA-BP-4963-01A 2 1 Out-of-frame Intra-chr q23 p14.2 74982 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRPC4AP-C9orf5 TRPC4AP chr20 33642779 - C9orf5 chr9 111835718 - Exonic hg19 BRCA TCGA-A2-A0SW-01A 3 1 Out-of-frame Inter-chr q11.22 74983 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRPC4AP-DYNLRB1 TRPC4AP chr20 33622926 - DYNLRB1 chr20 33128385 + Exonic hg19 COAD TCGA-A6-6782-01A 164 95 In-Frame Intra-chr q11.22 q11.22 Seq+ 74984 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRPC4AP-KCNB1 TRPC4AP chr20 33657099 - KCNB1 chr20 47991529 - Exonic hg19 LGG TCGA-TM-A84H-01A 5 4 In-Frame Intra-chr q11.22 q13.13 Seq+ 74985 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRPC4AP-KIAA0889 TRPC4AP chr20 33665849 - KIAA0889 chr20 35433305 - Exonic hg19 HNSC TCGA-RS-A6TP-01A 11 7 Out-of-frame Intra-chr q11.22 74986 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRPC4AP-RALY TRPC4AP chr20 33622926 - RALY chr20 32619328 + Exonic hg19 BRCA TCGA-LL-A441-01A 11 8 CDS-5'UTR Intra-chr q11.22 q11.22 Seq+ 74987 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRPC4AP-RBM39 TRPC4AP chr20 33657099 - RBM39 chr20 34304727 - Exonic hg19 ESCA TCGA-L5-A4OQ-01A 11 46 In-Frame Intra-chr q11.22 q11.22 Seq+ 74988 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRPC4AP-SPG20OS TRPC4AP chr20 33596467 - SPG20OS chr13 36939637 + Exonic hg19 BRCA TCGA-AO-A1KQ-01A 8 4 CDS-5'UTR Inter-chr q11.22 Seq+ 74989 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRPC4AP-TOX2 TRPC4AP chr20 33597990 - TOX2 chr20 42695370 + Exonic hg19 BRCA TCGA-S3-A6ZF-01A 21 12 Out-of-frame Intra-chr q11.22 q13.12 Seq+ 74990 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRPM4-PPFIA3 TRPM4 chr19 49675365 - PPFIA3 chr19 49636258 + Exonic hg19 BRCA TCGA-AC-A3W5-01A 27 19 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 74991 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRPM4-PPFIA3 TRPM4 chr19 49675365 - PPFIA3 chr19 49636258 + Exonic hg19 KIRP TCGA-B1-7332-01A 3 4 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 74992 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRPM4-PPFIA3 TRPM4 chr19 49675365 - PPFIA3 chr19 49636258 + Exonic hg19 CESC TCGA-C5-A8XK-01A 4 4 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 74993 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRPM4-PPFIA3 TRPM4 chr19 49675365 - PPFIA3 chr19 49636258 + Exonic hg19 PRAD TCGA-KK-A8I5-01A 19 29 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 74994 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRPM4-PPFIA3 TRPM4 chr19 49675365 - PPFIA3 chr19 49636258 + Exonic hg19 BLCA TCGA-KQ-A41N-01A 17 8 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 74995 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRPM4-PPFIA3 TRPM4 chr19 49675365 - PPFIA3 chr19 49636258 + Exonic hg19 PCPG TCGA-QT-A5XJ-01A 8 6 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 74996 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRPM4-PPFIA3 TRPM4 chr19 49675365 - PPFIA3 chr19 49636258 + Exonic hg19 HNSC TCGA-T2-A6WX-01A 8 12 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 74997 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRPM7-C15orf33 TRPM7 chr15 50923614 - C15orf33 chr15 49663596 - Exonic hg19 BRCA TCGA-D8-A1XZ-01A 2 2 In-Frame Intra-chr q21.2 74998 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRPM7-TEPP TRPM7 chr15 50955164 - TEPP chr16 58018207 + Exonic hg19 SARC TCGA-DX-A8BS-01A 21 13 Out-of-frame Inter-chr q21.2 q21 Seq+ 74999 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRPM7-TMEM104 TRPM7 chr15 50949978 - TMEM104 chr17 72832066 + Exonic hg19 BRCA TCGA-C8-A1HI-01A 21 10 Out-of-frame Inter-chr q21.2 q25.1 Seq+ 75000 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRPM8-RABEP1 TRPM8 chr2 234928166 - RABEP1 chr17 5283828 + Exonic hg19 PRAD TCGA-G9-6371-01A 2 31 Out-of-frame Inter-chr q37.1 p13.2 75001 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRPM8-SLC4A4 TRPM8 chr2 234905160 - SLC4A4 chr4 72306333 + Exonic hg19 PRAD TCGA-KK-A7AZ-01A 17 11 Out-of-frame Inter-chr q37.1 q13.3 Seq+ 75002 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRPS1-DEPTOR TRPS1 chr8 116680772 - DEPTOR chr8 121061815 + Exonic hg19 LGG TCGA-HW-A5KK-01A 36 19 5'UTR-CDS Intra-chr q23.3 Transcription factor q24.12 Seq+ 75003 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRPV3-UBE2G1 TRPV3 chr17 3438867 - UBE2G1 chr17 4192703 - Exonic hg19 UCEC TCGA-AX-A2H4-01A 7 4 In-Frame Intra-chr p13.2 p13.2 Seq+ 75004 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRPV4-GIT2 TRPV4 chr12 110230168 - GIT2 chr12 110391039 - Exonic hg19 CESC TCGA-IR-A3LI-01A 16 12 In-Frame Intra-chr q24.11 q24.11 Seq+ 75005 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRPV4-KSR2 TRPV4 chr12 110271155 - KSR2 chr12 118020164 - Exonic hg19 SARC TCGA-QC-AA9N-01A 2 3 5'UTR-CDS Intra-chr q24.11 q24.23 TKL:RAF 75006 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRPV6-KEL TRPV6 chr7 142583134 - KEL chr7 142640970 - Exonic hg19 BRCA TCGA-LL-A5YO-01A 42 16 Out-of-frame Intra-chr q34 Seq+ 75007 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRRAP-ANKIB1 TRRAP chr7 98582667 - ANKIB1 chr7 91924203 + Exonic hg19 STAD TCGA-BR-8484-01A 15 33 CDS-5'UTR Intra-chr q22.1 Atypical:PIKK Oncogene q21.2 Seq+ 75008 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRRAP-PRKAR2B TRRAP chr7 98515302 - PRKAR2B chr7 106762397 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 5 4 Out-of-frame Intra-chr q22.1 Atypical:PIKK Oncogene Seq+ 75009 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TRUB2-KCNT1 TRUB2 chr9 131083878 - KCNT1 chr9 138641944 + Exonic hg19 BLCA TCGA-GD-A3OS-01A 36 33 Out-of-frame Intra-chr q34.11 q34.3 Seq+ 75010 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSC1-CEL TSC1 chr9 135796750 - CEL chr9 135945848 + Exonic hg19 PRAD TCGA-EJ-5503-01A 10 15 In-Frame Intra-chr q34.13 Oncogene Tumor suppressor gene q34.13 Seq+ 75011 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSC1-DOLPP1 TSC1 chr9 135796750 - DOLPP1 chr9 131848988 + Exonic hg19 HNSC TCGA-CR-6487-01A 40 27 In-Frame Intra-chr q34.13 Oncogene Tumor suppressor gene q34.11 Seq+ 75012 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSC1-SARDH TSC1 chr9 135796750 - SARDH chr9 136578246 - Exonic hg19 LIHC TCGA-GJ-A9DB-01A 3 4 Out-of-frame Intra-chr q34.13 Oncogene Tumor suppressor gene q34.2 Seq+ 75013 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSC2-MAPK8IP3 TSC2 chr16 2136872 - MAPK8IP3 chr16 1809959 + Exonic hg19 LUSC TCGA-LA-A7SW-01A 5 9 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 75014 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSC2-TMEM204 TSC2 chr16 2098754 - TMEM204 chr16 1604783 + Exonic hg19 BRCA TCGA-AR-A256-01A 12 13 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 75015 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSC22D1-DNAJC5B TSC22D1 chr13 45147299 - DNAJC5B chr8 66988895 + Exonic hg19 BRCA TCGA-AN-A0AS-01A 6 5 In-Frame Inter-chr q14.11 Tumor suppressor gene Transcription factor q13.1 Seq+ 75016 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSC22D1-EIF2AK2 TSC22D1 chr13 45007661 - EIF2AK2 chr2 37342384 - Exonic hg19 THCA TCGA-EL-A3T7-01A 2 142 Out-of-frame Inter-chr q14.11 Tumor suppressor gene Transcription factor p22.2 75017 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSC22D1-LETM1 TSC22D1 chr13 45147299 - LETM1 chr4 1827410 - Exonic hg19 HNSC TCGA-CN-4728-01A 3 1 Out-of-frame Inter-chr q14.11 Tumor suppressor gene Transcription factor p16.3 Seq+ 75018 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSC22D1-NUFIP1 TSC22D1 chr13 45147299 - NUFIP1 chr13 45540071 - Exonic hg19 PRAD TCGA-KK-A6E2-01A 6 7 In-Frame Intra-chr q14.11 Tumor suppressor gene Transcription factor q14.12 Seq+ 75019 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSC22D1-PLEKHA5 TSC22D1 chr13 45007661 - PLEKHA5 chr12 19441012 + Exonic hg19 LUAD TCGA-78-7161-01A 13 52 Out-of-frame Inter-chr q14.11 Tumor suppressor gene Transcription factor p12.3 Seq+ 75020 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSC22D2-ADCY5 TSC22D2 chr3 150129095 - ADCY5 chr3 123071428 - Exonic hg19 LUSC TCGA-85-6175-01A 6 2 Out-of-frame Intra-chr q25.1 q21.1 Seq+ 75021 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSC22D2-FGF12 TSC22D2 chr3 150129095 - FGF12 chr3 191888445 - Exonic hg19 BLCA TCGA-FD-A3SJ-01A 13 7 Out-of-frame Intra-chr q25.1 q29 Seq+ 75022 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSC22D2-SDCCAG8 TSC22D2 chr3 150129095 - SDCCAG8 chr1 243493842 + Exonic hg19 PRAD TCGA-HC-7233-01A 4 1 Out-of-frame Inter-chr q25.1 Seq+ 75023 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSC22D3-AP3M1 TSC22D3 chrX 106956451 - AP3M1 chr10 75898140 - Exonic hg19 PRAD TCGA-HC-7748-01A 2 3 3'UTR-5'UTR Inter-chr q22.3 q22.2 75024 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSEN15-ACBD6 TSEN15 chr1 184021024 - ACBD6 chr1 180461500 - Exonic hg19 LUAD TCGA-44-5644-01A 18 6 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 75025 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSEN2-ATG7 TSEN2 chr3 12526016 - ATG7 chr3 11399892 + Exonic hg19 SARC TCGA-DX-A7EU-01A 2 1 5'UTR-CDS Intra-chr p25.2 p25.3 75026 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSEN2-PPARG TSEN2 chr3 12546730 - PPARG chr3 12458203 + Exonic hg19 BLCA TCGA-DK-A2I1-01A 11 26 In-Frame Intra-chr p25.2 p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 75027 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSEN2-PPARG TSEN2 chr3 12560696 - PPARG chr3 12421203 + Exonic hg19 BLCA TCGA-E7-A4IJ-01A 5 5 In-Frame Intra-chr p25.2 p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 75028 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSEN2-PPARG TSEN2 chr3 12538053 - PPARG chr3 12475397 + Exonic hg19 BLCA TCGA-GC-A3RD-01A 39 26 Out-of-frame Intra-chr p25.2 p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 75029 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSEN2-SYN2 TSEN2 chr3 12538053 - SYN2 chr3 12224812 + Exonic hg19 BLCA TCGA-XF-AAMY-01A 8 11 Out-of-frame Intra-chr p25.2 p25.2 Seq+ 75030 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSEN54-NOTUM TSEN54 chr17 73515128 - NOTUM chr17 79916269 - Exonic hg19 SARC TCGA-QC-A6FX-01A 10 1 In-Frame Intra-chr q25.1 q25.3 75031 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSFM-CYP27B1 TSFM chr12 58180945 - CYP27B1 chr12 58159980 - Exonic hg19 LGG TCGA-E1-A7YD-01A 262 122 In-Frame Intra-chr q14.1 q14.1 Seq+ 75032 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSFM-FRS2 TSFM chr12 58186856 - FRS2 chr12 69879982 + Exonic hg19 SARC TCGA-DX-A23Y-01A 15 14 Out-of-frame Intra-chr q14.1 q15 Seq+ 75033 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSFM-HMGA2 TSFM chr12 58180074 - HMGA2 chr12 66345163 + Exonic hg19 SKCM TCGA-GN-A26D-06A 61 20 In-Frame Intra-chr q14.1 q14.3 Transcription factor Seq+ 75034 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSFM-LRRIQ1 TSFM chr12 58180945 - LRRIQ1 chr12 85517848 + Exonic hg19 SARC TCGA-SG-A6Z7-01A 22 7 Out-of-frame Intra-chr q14.1 q21.31 Seq+ 75035 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSFM-MARCH9 TSFM chr12 58180945 - 2019_ 3_ 9_ chr12 58151891 + Exonic hg19 LUAD TCGA-64-5775-01A 32 16 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 75036 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSFM-NUP107 TSFM chr12 58186856 - NUP107 chr12 69103018 + Exonic hg19 GBM TCGA-19-2624-01A 66 171 Out-of-frame Intra-chr q14.1 q15 Seq+ 75037 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSHZ1-RNASEH2B TSHZ1 chr18 72923198 - RNASEH2B chr13 51501543 + Exonic hg19 SARC TCGA-KF-A41W-01A 2 1 5'UTR-CDS Inter-chr q22.3 Transcription factor q14.3 Seq+ 75038 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSHZ2-TOX2 TSHZ2 chr20 51589872 - TOX2 chr20 42602007 + Exonic hg19 UCS TCGA-N8-A4PN-01A 25 16 Out-of-frame Intra-chr q13.2 Transcription factor q13.12 Seq+ 75039 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSHZ3-CDH2 TSHZ3 chr19 31840086 - CDH2 chr18 25593873 - Exonic hg19 PAAD TCGA-HV-A5A3-01A 7 6 In-Frame Inter-chr q12 Transcription factor q12.1 Oncogene Seq+ 75040 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSHZ3-CEACAM7 TSHZ3 chr19 31840086 - CEACAM7 chr19 42181431 - Exonic hg19 LGG TCGA-P5-A5EU-01A 6 8 In-Frame Intra-chr q12 Transcription factor Seq+ 75041 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSHZ3-IL29 TSHZ3 chr19 31840086 - IL29 chr19 39787445 + Exonic hg19 HNSC TCGA-CV-7407-01A 5 11 Out-of-frame Intra-chr q12 Transcription factor Seq+ 75042 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSKU-SFRP4 TSKU chr11 76494448 - SFRP4 chr7 37954055 - Exonic hg19 BRCA TCGA-A8-A091-01A 35 41 5'UTR-CDS Inter-chr q13.5 p14.1 Tumor suppressor gene Seq+ 75043 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSNARE1-COL22A1 TSNARE1 chr8 143365774 - COL22A1 chr8 139833654 - Exonic hg19 LUAD TCGA-J2-A4AE-01A 10 8 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 75044 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSNARE1-GDF6 TSNARE1 chr8 143356142 - GDF6 chr8 97157752 - Exonic hg19 BLCA TCGA-FD-A3SJ-01A 2 1 Out-of-frame Intra-chr q24.3 q22.1 75045 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN1-CEP152 TSPAN1 chr1 46651630 - CEP152 chr15 49057864 - Exonic hg19 UCEC TCGA-AJ-A8CV-01A 2 4 Out-of-frame Inter-chr p34.1 q21.1 75046 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN1-EIF2AK2 TSPAN1 chr1 46651630 - EIF2AK2 chr2 37342384 - Exonic hg19 KIRC TCGA-B0-5691-01A 2 1 Out-of-frame Inter-chr p34.1 p22.2 75047 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN1-TFF3 TSPAN1 chr1 46651630 - TFF3 chr21 43735706 - Exonic hg19 PRAD TCGA-HC-7738-01A 3 7 3'UTR-5'UTR Inter-chr p34.1 q22.3 75048 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN1-USP20 TSPAN1 chr1 46651630 - USP20 chr9 132620746 + Exonic hg19 PRAD TCGA-G9-6371-01A 2 2 3'UTR-CDS Inter-chr p34.1 q34.11 75049 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN10-SQSTM1 TSPAN10 chr17 79615778 - SQSTM1 chr5 179250858 + Exonic hg19 SKCM TCGA-FS-A1ZQ-06A 2 1 3'UTR-CDS Inter-chr q25.3 q35.3 75050 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN13-BZW2 TSPAN13 chr7 16793655 - BZW2 chr7 16734459 + Exonic hg19 BLCA TCGA-XF-AAMG-01A 33 34 In-Frame Intra-chr p21.1 Tumor suppressor gene p21.1 Seq+ 75051 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN14-DYDC2 TSPAN14 chr10 82249070 - DYDC2 chr10 82122191 + Exonic hg19 LUAD TCGA-55-1594-01A 29 14 CDS-5'UTR Intra-chr q23.1 q23.1 Seq+ 75052 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN14-DYDC2 TSPAN14 chr10 82249070 - DYDC2 chr10 82122191 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 13 6 CDS-5'UTR Intra-chr q23.1 q23.1 Seq+ 75053 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN14-IFIT1 TSPAN14 chr10 82228443 - IFIT1 chr10 91162038 + Exonic hg19 STAD TCGA-D7-A6EZ-01A 8 23 5'UTR-CDS Intra-chr q23.1 q23.31 Seq+ 75054 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN14-SFTPD TSPAN14 chr10 82228443 - SFTPD chr10 81702635 - Exonic hg19 BRCA TCGA-D8-A1XK-01A 38 22 5'UTR-CDS Intra-chr q23.1 q22.3 Seq+ 75055 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN15-HK1 TSPAN15 chr10 71258152 - HK1 chr10 71103583 + Exonic hg19 BLCA TCGA-DK-A6B2-01A 93 51 In-Frame Intra-chr q22.1 q22.1 Seq+ 75056 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN15-SAMD8 TSPAN15 chr10 71211446 - SAMD8 chr10 76924403 + Exonic hg19 BRCA TCGA-E9-A244-01A 6 5 Out-of-frame Intra-chr q22.1 q22.2 Seq+ 75057 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN15-VPS26A TSPAN15 chr10 71211446 - VPS26A chr10 70915568 + Exonic hg19 BRCA TCGA-E2-A15S-01A 2 9 In-Frame Intra-chr q22.1 q22.1 Seq+ 75058 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN18-PIK3R2 TSPAN18 chr11 44748837 - PIK3R2 chr19 18276970 + Exonic hg19 ACC TCGA-OR-A5KY-01A 23 20 5'UTR-CDS Inter-chr p11.2 p13.11 Oncogene Seq+ 75059 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN18-TEX13B TSPAN18 chr11 44882020 - TEX13B chrX 107225389 - Exonic hg19 SARC TCGA-DX-A6Z0-01A 2 4 5'UTR-5'UTR Inter-chr p11.2 q22.3 Seq+ 75060 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN3-CFB TSPAN3 chr15 77338372 - CFB chr6 31913427 + Exonic hg19 BRCA TCGA-AC-A2FE-01A 2 1 Out-of-frame Inter-chr q24.3 75061 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN3-PLAT TSPAN3 chr15 77338372 - PLAT chr8 42051245 - Exonic hg19 LGG TCGA-DU-7013-01A 2 32 Out-of-frame Inter-chr q24.3 p11.21 75062 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN31-WIF1 TSPAN31 chr12 58140914 - WIF1 chr12 65471634 - Exonic hg19 SARC TCGA-DX-A23V-01A 143 75 In-Frame Intra-chr q14.1 q14.3 Tumor suppressor gene Seq+ 75063 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN4-EPS8L2 TSPAN4 chr11 850367 - EPS8L2 chr11 720062 + Exonic hg19 LUAD TCGA-78-7150-01A 9 14 In-Frame Intra-chr p15.5 p15.5 Seq+ 75064 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN4-TALDO1 TSPAN4 chr11 847300 - TALDO1 chr11 755879 + Exonic hg19 KIRP TCGA-G7-A8LD-01A 111 86 5'UTR-CDS Intra-chr p15.5 p15.5 Seq+ 75065 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN5-EMCN TSPAN5 chr4 99579297 - EMCN chr4 101344561 - Exonic hg19 LGG TCGA-TM-A84I-01A 3 1 Out-of-frame Intra-chr q23 q24 Seq+ 75066 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN5-MAPK10 TSPAN5 chr4 99579297 - MAPK10 chr4 86938528 - Exonic hg19 HNSC TCGA-UP-A6WW-01A 14 17 Out-of-frame Intra-chr q23 q21.3 Tumor suppressor gene Seq+ 75067 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN5-PKD2 TSPAN5 chr4 99579297 - PKD2 chr4 88973143 + Exonic hg19 BRCA TCGA-E9-A243-01A 5 1 In-Frame Intra-chr q23 q22.1 CAMK:PKD 75068 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN8-ASH2L TSPAN8 chr12 71676496 - ASH2L chr8 37996334 + Exonic hg19 SARC TCGA-DX-A3LS-01A 41 18 5'UTR-CDS Inter-chr q21.1 p11.23 Seq+ 75069 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN8-HSP90B1 TSPAN8 chr12 71518880 - HSP90B1 chr12 104333287 + Exonic hg19 COAD TCGA-CK-6751-01A 2 6 3'UTR-CDS Intra-chr q21.1 q23.3 Tumor suppressor gene 75070 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN8-IL26 TSPAN8 chr12 71676496 - IL26 chr12 68595863 - Exonic hg19 SARC TCGA-DX-AB2S-01A 13 13 5'UTR-CDS Intra-chr q21.1 q15 Seq+ 75071 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN8-OSBPL8 TSPAN8 chr12 71551399 - OSBPL8 chr12 76752591 - Exonic hg19 SARC TCGA-3B-A9HS-01A 7 14 In-Frame Intra-chr q21.1 q21.2 75072 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN8-UTRN TSPAN8 chr12 71518881 - UTRN chr6 144665237 + Exonic hg19 LUAD TCGA-97-7552-01A 2 9 Out-of-frame Inter-chr q21.1 q24.2 75073 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN9-CACNA1C TSPAN9 chr12 3310422 - CACNA1C chr12 2773991 + Exonic hg19 BRCA TCGA-AO-A03V-01A 8 6 Out-of-frame Intra-chr p13.33 p13.33 Seq+ 75074 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN9-DNM1L TSPAN9 chr12 3310422 - DNM1L chr12 32854349 + Exonic hg19 PCPG TCGA-QT-A5XO-01A 11 11 In-Frame Intra-chr p13.33 p11.21 Seq+ 75075 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN9-KLRG1 TSPAN9 chr12 3192885 - KLRG1 chr12 9161571 + Exonic hg19 SKCM TCGA-EE-A29V-06A 30 16 5'UTR-CDS Intra-chr p13.33 p13.31 Seq+ 75076 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN9-KRT7 TSPAN9 chr12 3192885 - KRT7 chr12 52628939 + Exonic hg19 LGG TCGA-TM-A84I-01A 20 15 5'UTR-CDS Intra-chr p13.33 q13.13 Seq+ 75077 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN9-KRT86 TSPAN9 chr12 3192885 - KRT86 chr12 52699024 + Exonic hg19 LGG TCGA-TM-A84I-01A 4 1 5'UTR-CDS Intra-chr p13.33 q13.13 75078 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN9-PRH1 TSPAN9 chr12 3192885 - PRH1 chr12 11035695 - Exonic hg19 BRCA TCGA-A8-A09T-01A 12 2 5'UTR-CDS Intra-chr p13.33 Seq+ 75079 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN9-PRR4 TSPAN9 chr12 3192885 - PRR4 chr12 11001006 - Exonic hg19 BRCA TCGA-A8-A09T-01A 6 9 5'UTR-CDS Intra-chr p13.33 Seq+ 75080 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN9-SLC2A13 TSPAN9 chr12 3192885 - SLC2A13 chr12 40345167 - Exonic hg19 SKCM TCGA-ER-A2NE-06A 3 2 5'UTR-CDS Intra-chr p13.33 q12 75081 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN9-TMEM200A TSPAN9 chr12 3186619 - TMEM200A chr6 130761552 + Exonic hg19 SARC TCGA-JV-A5VF-01A 3 2 5'UTR-5'UTR Inter-chr p13.33 q23.1 75082 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPAN9-TTC38 TSPAN9 chr12 3192885 - TTC38 chr22 46688688 + Exonic hg19 LUSC TCGA-63-A5MW-01A 23 9 5'UTR-CDS Inter-chr p13.33 q13.31 Seq+ 75083 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPO-CDH18 TSPO chr22 43557196 - CDH18 chr5 19981287 - Exonic hg19 SKCM TCGA-FS-A4F4-06A 77 73 5'UTR-5'UTR Inter-chr q13.2 p14.3 Seq+ 75084 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSPO-PRR5 TSPO chr22 43547610 - PRR5 chr22 45121124 + Exonic hg19 BLCA TCGA-XF-AAMW-01A 4 12 5'UTR-5'UTR Intra-chr q13.2 q13.31 Tumor suppressor gene Seq+ 75085 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSSC1-MYT1L TSSC1 chr2 3358321 - MYT1L chr2 2176760 - Exonic hg19 LUSC TCGA-96-A4JK-01A 5 1 CDS-5'UTR Intra-chr p25.3 p25.3 Transcription factor 75086 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSSC1-SLC5A6 TSSC1 chr2 3341788 - SLC5A6 chr2 27434401 - Exonic hg19 KIRP TCGA-G7-6792-01A 3 1 CDS-5'UTR Intra-chr p25.3 p23.3 Seq+ 75087 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TSSC4-LSP1 TSSC4 chr11 2422028 - LSP1 chr11 1901317 + Exonic hg19 UCEC TCGA-A5-A1OH-01A 4 28 5'UTR-5'UTR Intra-chr p15.5 Tumor suppressor gene p15.5 Seq+ 75088 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTBK2-TGM7 TTBK2 chr15 43212636 - TGM7 chr15 43585829 - Exonic hg19 PRAD TCGA-EJ-A46G-01A 3 2 5'UTR-CDS Intra-chr q15.2 CK1:TTBK q15.3 Oncogene 75089 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTBK2-UBR1 TTBK2 chr15 43075617 - UBR1 chr15 43309379 - Exonic hg19 LUSC TCGA-56-7822-01A 4 5 In-Frame Intra-chr q15.2 CK1:TTBK q15.2 75090 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC12-LUC7L2 TTC12 chr11 113215162 - LUC7L2 chr7 139097297 + Exonic hg19 HNSC TCGA-CR-6467-01A 13 5 In-Frame Inter-chr q23.2 q34 Seq+ 75091 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC13-JAK2 TTC13 chr1 231075132 - JAK2 chr9 5064883 + Exonic hg19 BRCA TCGA-E9-A22D-01A 34 30 In-Frame Inter-chr q42.2 p24.1 TK:JakA Oncogene Seq+ 75092 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC17-API5 TTC17 chr11 43380663 - API5 chr11 43340190 + Exonic hg19 COAD TCGA-AA-A02K-01A 2 4 In-Frame Intra-chr p12 p12 Seq+ 75093 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC17-TMPRSS4 TTC17 chr11 43411371 - TMPRSS4 chr11 117983984 + Exonic hg19 PAAD TCGA-2J-AABP-01A 2 1 In-Frame Intra-chr p12 q23.3 75094 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC19-MMP28 TTC19 chr17 15903559 - MMP28 chr17 34097331 - Exonic hg19 CHOL TCGA-W5-AA31-01A 5 1 Out-of-frame Intra-chr p12 q12 Seq+ 75095 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC19-TOM1L2 TTC19 chr17 15930016 - TOM1L2 chr17 17797124 - Exonic hg19 BRCA TCGA-AC-A2FO-01A 3 4 Out-of-frame Intra-chr p12 p11.2 Tumor suppressor gene Seq+ 75096 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC21B-COBLL1 TTC21B chr2 166714725 - COBLL1 chr2 165600385 - Exonic hg19 PRAD TCGA-FC-A4JI-01A 18 19 3'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 75097 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC21B-SLC38A11 TTC21B chr2 166810195 - SLC38A11 chr2 165802237 - Exonic hg19 PRAD TCGA-HC-7744-01A 50 14 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 75098 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC23-TCF12 TTC23 chr15 99768738 - TCF12 chr15 57543548 + Exonic hg19 PRAD TCGA-V1-A8WS-01A 2 1 Out-of-frame Intra-chr q26.3 q21.3 Oncogene Transcription factor 75099 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC23L-CACNA2D3 TTC23L chr5 34850413 - CACNA2D3 chr3 54615830 + Exonic hg19 BLCA TCGA-UY-A9PE-01A 2 1 Out-of-frame Inter-chr p13.2 p21.1 Tumor suppressor gene 75100 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC27-ARHGEF33 TTC27 chr2 32859072 - ARHGEF33 chr2 39146504 + Exonic hg19 KIRP TCGA-A4-A5Y0-01A 7 3 CDS-5'UTR Intra-chr p22.3 p22.1 Seq+ 75101 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC27-BIRC6 TTC27 chr2 32961883 - BIRC6 chr2 32828073 + Exonic hg19 LUSC TCGA-94-8491-01A 2 1 In-Frame Intra-chr p22.3 p22.3 75102 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC27-DHX57 TTC27 chr2 33012216 - DHX57 chr2 39041037 - Exonic hg19 PRAD TCGA-CH-5751-01A 4 3 In-Frame Intra-chr p22.3 p22.1 75103 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC27-SPAST TTC27 chr2 32903989 - SPAST chr2 32366973 + Exonic hg19 LUSC TCGA-60-2715-01A 2 1 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 75104 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC28-ARHGAP15 TTC28 chr22 28559080 - ARHGAP15 chr2 144525558 + Exonic hg19 BLCA TCGA-E7-A4IJ-01A 4 4 Out-of-frame Inter-chr q12.1 q22.2 Seq+ 75105 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC28-EP300 TTC28 chr22 29025540 - EP300 chr22 41531817 + Exonic hg19 LUSC TCGA-34-5929-01A 2 2 Out-of-frame Intra-chr q12.1 q13.2 Oncogene Seq+ 75106 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC28-EWSR1 TTC28 chr22 29025540 - EWSR1 chr22 29694723 + Exonic hg19 SARC TCGA-3B-A9HO-01A 21 14 Out-of-frame Intra-chr q12.1 q12.2 Seq+ 75107 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC28-NEFH TTC28 chr22 28385866 - NEFH chr22 29881712 + Exonic hg19 SARC TCGA-IS-A3KA-01A 2 1 Out-of-frame Intra-chr q12.1 q12.2 75108 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC28-ODF1 TTC28 chr22 29025540 - ODF1 chr8 103572680 + Exonic hg19 LUAD TCGA-44-5644-01A 16 18 Out-of-frame Inter-chr q12.1 q22.3 Seq+ 75109 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC3-BRWD1 TTC3 chr21 38498443 - BRWD1 chr21 40636611 - Exonic hg19 LGG TCGA-DU-6406-01A 14 6 Out-of-frame Intra-chr q22.13 q22.2 Seq+ 75110 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC3-CBS TTC3 chr21 38445773 - CBS chr21 44493451 - Exonic hg19 READ TCGA-DC-4745-01A 6 8 5'UTR-5'UTR Intra-chr q22.13 q22.3 Seq+ 75111 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC31-INO80B TTC31 chr2 74710537 - INO80B chr2 74682533 + Exonic hg19 LIHC TCGA-DD-A73G-01A 2 1 Out-of-frame Intra-chr p13.1 p13.1 75112 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC33-AC008810.1 TTC33 chr5 40728447 - AC008810.1 chr5 40771965 - Exonic hg19 BRCA TCGA-A7-A13D-01A 2 1 Out-of-frame Intra-chr p13.1 75113 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC33-ADAM19 TTC33 chr5 40746900 - ADAM19 chr5 156964999 - Exonic hg19 BRCA TCGA-C8-A12W-01A 5 1 In-Frame Intra-chr p13.1 q33.3 Seq+ 75114 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC33-GRM5 TTC33 chr5 40755926 - GRM5 chr11 88242672 - Exonic hg19 LUAD TCGA-91-6831-01A 2 1 5'UTR-CDS Inter-chr p13.1 q14.3 75115 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC39A-CRISP1 TTC39A chr1 51760063 - CRISP1 chr6 49819842 - Exonic hg19 BRCA TCGA-BH-A209-01A 435 96 In-Frame Inter-chr p32.3 p12.3 Seq+ 75116 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC39A-FGGY TTC39A chr1 51787393 - FGGY chr1 59977983 + Exonic hg19 PCPG TCGA-QT-A5XN-01A 8 6 Out-of-frame Intra-chr p32.3 p32.1 Seq+ 75117 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC39A-MRPL37 TTC39A chr1 51771649 - MRPL37 chr1 54681814 + Exonic hg19 PRAD TCGA-KK-A7AW-01A 4 10 In-Frame Intra-chr p32.3 p32.3 Seq+ 75118 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC39A-PHGDH TTC39A chr1 51787393 - PHGDH chr1 120263793 + Exonic hg19 LUAD TCGA-55-6972-01A 4 1 Out-of-frame Intra-chr p32.3 p12 Seq+ 75119 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC39B-C9orf150 TTC39B chr9 15307082 - C9orf150 chr9 12821385 + Exonic hg19 CESC TCGA-EK-A2PG-01A 67 37 Out-of-frame Intra-chr p22.3 75120 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC39C-CABLES1 TTC39C chr18 21595002 - CABLES1 chr18 20837191 + Exonic hg19 OV TCGA-13-0893-01B 2 3 Out-of-frame Intra-chr q11.2 q11.2 Tumor suppressor gene Seq+ 75121 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC39C-LAMA3 TTC39C chr18 21663045 - LAMA3 chr18 21526108 + Exonic hg19 LUAD TCGA-49-6745-01A 27 15 In-Frame Intra-chr q11.2 q11.2 Seq+ 75122 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC39C-NPC1 TTC39C chr18 21663045 - NPC1 chr18 21153538 - Exonic hg19 STAD TCGA-CD-8526-01A 3 3 In-Frame Intra-chr q11.2 q11.2 75123 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC4-SSBP3 TTC4 chr1 55199383 - SSBP3 chr1 54747200 - Exonic hg19 SARC TCGA-PC-A5DP-01A 2 1 In-Frame Intra-chr p32.3 Tumor suppressor gene p32.3 75124 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-ACTN4 TTC6 chr14 38170731 - ACTN4 chr19 39195574 + Exonic hg19 PRAD TCGA-KC-A7FA-01A 2 2 Out-of-frame Inter-chr q21.1 75125 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-ADAMTS5 TTC6 chr14 38075947 - ADAMTS5 chr21 28327190 - Exonic hg19 PRAD TCGA-FC-A4JI-01A 2 1 Out-of-frame Inter-chr q21.1 q21.3 75126 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-C9orf102 TTC6 chr14 38206939 - C9orf102 chr9 98643151 + Exonic hg19 PRAD TCGA-VP-A872-01A 2 2 Out-of-frame Inter-chr q21.1 75127 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-FAM177A1 TTC6 chr14 38092208 - FAM177A1 chr14 35522484 + Exonic hg19 PRAD TCGA-EJ-A46G-01A 9 9 Out-of-frame Intra-chr q21.1 q13.2 Seq+ 75128 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-HOXA1 TTC6 chr14 38065213 - HOXA1 chr7 27134974 - Exonic hg19 PRAD TCGA-YL-A9WH-01A 57 47 Out-of-frame Inter-chr q21.1 p15.2 Transcription factor Seq+ 75129 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-KIAA0391 TTC6 chr14 38092208 - KIAA0391 chr14 35735933 + Exonic hg19 PRAD TCGA-EJ-A46G-01A 14 4 Out-of-frame Intra-chr q21.1 q13.2 Seq+ 75130 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38075947 - MIPOL1 chr14 38016110 + Exonic hg19 LUSC TCGA-39-5024-01A 2 6 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 75131 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38075947 - MIPOL1 chr14 38016110 + Exonic hg19 LUAD TCGA-49-AARE-01A 20 18 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 75132 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38065213 - MIPOL1 chr14 38016110 + Exonic hg19 LUSC TCGA-66-2753-01A 16 6 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 75133 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38075947 - MIPOL1 chr14 37777261 + Exonic hg19 LUSC TCGA-66-2771-01A 5 8 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 75134 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38092208 - MIPOL1 chr14 37838722 + Exonic hg19 LUSC TCGA-85-8664-01A 2 2 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 75135 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38092208 - MIPOL1 chr14 37892060 + Exonic hg19 PRAD TCGA-CH-5761-01A 103 56 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 75136 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38075947 - MIPOL1 chr14 37969113 + Exonic hg19 PRAD TCGA-EJ-5514-01A 15 6 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 75137 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38075947 - MIPOL1 chr14 37969113 + Exonic hg19 PRAD TCGA-EJ-7331-01A 63 48 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 75138 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38075947 - MIPOL1 chr14 37969113 + Exonic hg19 PRAD TCGA-EJ-A65B-01A 2 19 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 75139 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38065213 - MIPOL1 chr14 37969113 + Exonic hg19 PRAD TCGA-EJ-A65J-01A 2 1 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 75140 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38065213 - MIPOL1 chr14 37892060 + Exonic hg19 PRAD TCGA-EJ-A7NN-01A 3 5 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 75141 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38092208 - MIPOL1 chr14 38016110 + Exonic hg19 PRAD TCGA-HC-8261-01A 28 22 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 75142 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38075947 - MIPOL1 chr14 37969113 + Exonic hg19 PRAD TCGA-KK-A6E5-01A 8 7 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 75143 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38065213 - MIPOL1 chr14 37716308 + Exonic hg19 LUSC TCGA-NC-A5HQ-01A 3 1 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 75144 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38075947 - MIPOL1 chr14 37969113 + Exonic hg19 PRAD TCGA-V1-A9ZK-01A 57 83 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 75145 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38075947 - MIPOL1 chr14 37838722 + Exonic hg19 LUSC TCGA-XC-AA0X-01A 5 4 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 75146 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38075947 - MIPOL1 chr14 37969113 + Exonic hg19 PRAD TCGA-ZG-A8QW-01A 22 16 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 75147 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-MIPOL1 TTC6 chr14 38075947 - MIPOL1 chr14 37969113 + Exonic hg19 PRAD TCGA-ZG-A9LU-01A 2 2 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 75148 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-PAX9 TTC6 chr14 38065213 - PAX9 chr14 37130902 + Exonic hg19 PRAD TCGA-KC-A7F5-01A 3 4 Out-of-frame Intra-chr q21.1 q13.3 Transcription factor Seq+ 75149 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-POLR3A TTC6 chr14 38065213 - POLR3A chr10 79764646 - Exonic hg19 PRAD TCGA-ZG-A9N3-01A 14 12 Out-of-frame Inter-chr q21.1 q22.3 Seq+ 75150 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC6-SKAP2 TTC6 chr14 38065213 - SKAP2 chr7 26894509 - Exonic hg19 PRAD TCGA-YL-A9WH-01A 3 1 Out-of-frame Inter-chr q21.1 p15.2 75151 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC7A-AC016722.2 TTC7A chr2 47288110 - AC016722.2 chr2 47083062 + Exonic hg19 SARC TCGA-K1-A3PO-01A 6 1 Out-of-frame Intra-chr p21 p21 75152 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC7B-HTRA3 TTC7B chr14 91211136 - HTRA3 chr4 8284164 + Exonic hg19 UCS TCGA-N5-A4RV-01A 8 7 Out-of-frame Inter-chr q32.11 p16.1 Tumor suppressor gene Seq+ 75153 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC7B-PPP2R5C TTC7B chr14 91196419 - PPP2R5C chr14 102323023 + Exonic hg19 HNSC TCGA-CN-4735-01A 8 1 Out-of-frame Intra-chr q32.11 q32.31 Tumor suppressor gene Seq+ 75154 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC7B-RPS6KA5 TTC7B chr14 91282519 - RPS6KA5 chr14 91341704 - Exonic hg19 BLCA TCGA-DK-A1AC-01A 6 6 Out-of-frame Intra-chr q32.11 q32.11 Seq+ 75155 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC7B-RPS6KA5 TTC7B chr14 91161844 - RPS6KA5 chr14 91372643 - Exonic hg19 KIRP TCGA-G7-6793-01A 6 2 Out-of-frame Intra-chr q32.11 q32.11 Seq+ 75156 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC7B-RUNX1 TTC7B chr14 91110392 - RUNX1 chr21 36265260 - Exonic hg19 LUSC TCGA-77-8154-01A 2 2 Out-of-frame Inter-chr q32.11 q22.12 Oncogene Tumor suppressor gene Transcription factor Seq+ 75157 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC7B-SLC35F4 TTC7B chr14 91196419 - SLC35F4 chr14 58048151 - Exonic hg19 SARC TCGA-IF-A3RQ-01A 10 3 In-Frame Intra-chr q32.11 q23.1 75158 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTC9C-BSCL2 TTC9C chr11 62496558 - BSCL2 chr11 62474796 - Exonic hg19 BLCA TCGA-GU-AATQ-01A 6 1 CDS-3'UTR Intra-chr q12.3 q12.3 75159 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTI1-C3orf67 TTI1 chr20 36631030 - C3orf67 chr3 58870435 - Exonic hg19 PRAD TCGA-ZG-A9LM-01A 2 6 Out-of-frame Inter-chr q11.23 p14.2 Seq+ 75160 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTK-TMEM63B TTK chr6 80721265 - TMEM63B chr6 44119583 + Exonic hg19 SARC TCGA-DX-A23Y-01A 24 15 In-Frame Intra-chr q14.1 Other:TTK p21.1 Seq+ 75161 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTLL1-KIF1B TTLL1 chr22 43442416 - KIF1B chr1 10394578 + Exonic hg19 SKCM TCGA-EB-A431-01A 5 1 In-Frame Inter-chr q13.2 p36.22 Tumor suppressor gene 75162 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTLL1-MCAT TTLL1 chr22 43447807 - MCAT chr22 43537255 - Exonic hg19 PRAD TCGA-KC-A4BL-01A 2 1 In-Frame Intra-chr q13.2 q13.2 Seq+ 75163 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTLL11-NDUFA8 TTLL11 chr9 124794002 - NDUFA8 chr9 124910556 - Exonic hg19 HNSC TCGA-BB-4227-01A 14 7 Out-of-frame Intra-chr q33.2 q33.2 Seq+ 75164 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTLL11-VWCE TTLL11 chr9 124801551 - VWCE chr11 61050377 - Exonic hg19 OV TCGA-25-1313-01A 3 1 In-Frame Inter-chr q33.2 q12.2 Seq+ 75165 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTLL12-SCUBE1 TTLL12 chr22 43572326 - SCUBE1 chr22 43634960 - Exonic hg19 BRCA TCGA-AC-A8OP-01A 3 1 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 75166 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTLL12-USP39 TTLL12 chr22 43564780 - USP39 chr2 85872071 + Exonic hg19 STAD TCGA-BR-4357-01A 2 4 Out-of-frame Inter-chr q13.2 p11.2 75167 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTLL4-MREG TTLL4 chr2 219605307 - MREG chr2 216861188 - Exonic hg19 LUSC TCGA-60-2712-01A 9 1 In-Frame Intra-chr q35 q35 75168 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTLL4-RQCD1 TTLL4 chr2 219575760 - RQCD1 chr2 219445284 + Exonic hg19 BRCA TCGA-A7-A4SD-01A 6 5 5'UTR-CDS Intra-chr q35 Seq+ 75169 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTLL5-BATF TTLL5 chr14 76238197 - BATF chr14 76012805 + Exonic hg19 PRAD TCGA-KK-A5A1-01A 2 1 In-Frame Intra-chr q24.3 q24.3 Transcription factor 75170 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTLL5-EIF2B2 TTLL5 chr14 76286504 - EIF2B2 chr14 75474425 + Exonic hg19 STAD TCGA-IN-A6RS-01A 3 27 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 75171 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTLL5-JDP2 TTLL5 chr14 76129566 - JDP2 chr14 75904601 + Exonic hg19 LIHC TCGA-BC-4073-01B 2 2 Out-of-frame Intra-chr q24.3 q24.3 Tumor suppressor gene Transcription factor Seq+ 75172 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTLL5-JDP2 TTLL5 chr14 76259443 - JDP2 chr14 75928129 + Exonic hg19 ESCA TCGA-L5-A4OQ-01A 3 31 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene Transcription factor Seq+ 75173 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTLL5-RGS6 TTLL5 chr14 76249873 - RGS6 chr14 72921236 + Exonic hg19 LUSC TCGA-77-A5G6-01A 7 3 In-Frame Intra-chr q24.3 q24.2 Seq+ 75174 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTLL5-TCP11L2 TTLL5 chr14 76219298 - TCP11L2 chr12 106734604 + Exonic hg19 SARC TCGA-DX-A48N-01A 5 4 In-Frame Inter-chr q24.3 q23.3 Seq+ 75175 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTLL5-TSHR TTLL5 chr14 76286504 - TSHR chr14 81528492 + Exonic hg19 BRCA TCGA-AR-A1AP-01A 15 9 In-Frame Intra-chr q24.3 q31.1 Oncogene Seq+ 75176 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTLL6-NOS2 TTLL6 chr17 46862285 - NOS2 chr17 26116714 - Exonic hg19 ESCA TCGA-L5-A4OW-01A 4 25 Out-of-frame Intra-chr q21.32 q11.2 Seq+ 75177 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTLL7-SAMD13 TTLL7 chr1 84369762 - SAMD13 chr1 84791320 + Exonic hg19 PRAD TCGA-KK-A6E1-01A 6 5 Out-of-frame Intra-chr p31.1 p31.1 Seq+ 75178 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTLL7-TERT TTLL7 chr1 84464614 - TERT chr5 1282739 - Exonic hg19 BRCA TCGA-C8-A131-01A 9 1 5'UTR-CDS Inter-chr p31.1 p15.33 Oncogene 75179 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTR-ARFGEF2 TTR chr18 29178984 - ARFGEF2 chr20 47615777 + Exonic hg19 LIHC TCGA-FV-A2QR-01A 2 2 Out-of-frame Inter-chr q12.1 q13.13 75180 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTR-TYK2 TTR chr18 29178984 - TYK2 chr19 10491352 - Exonic hg19 PAAD TCGA-3A-A9IS-01A 2 1 Out-of-frame Inter-chr q12.1 p13.2 TK:JakA 75181 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTYH3-ASPSCR1 TTYH3 chr7 2671912 - ASPSCR1 chr17 79966913 + Exonic hg19 SKCM TCGA-Z2-AA3V-06A 10 11 In-Frame Inter-chr p22.3 q25.3 Seq+ 75182 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTYH3-C7orf50 TTYH3 chr7 2671912 - C7orf50 chr7 1049779 - Exonic hg19 SKCM TCGA-Z2-AA3V-06A 8 11 In-Frame Intra-chr p22.3 p22.3 Seq+ 75183 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTYH3-DDX27 TTYH3 chr7 2704434 - DDX27 chr20 47849303 + Exonic hg19 SKCM TCGA-EE-A29C-06A 2 13 Out-of-frame Inter-chr p22.3 q13.13 75184 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTYH3-MAD1L1 TTYH3 chr7 2671912 - MAD1L1 chr7 1938026 - Exonic hg19 SKCM TCGA-3N-A9WD-06A 5 4 Out-of-frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 75185 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTYH3-MAD1L1 TTYH3 chr7 2671912 - MAD1L1 chr7 1938026 - Exonic hg19 LAML TCGA-AB-2811-03B 2 2 Out-of-frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 75186 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTYH3-MAD1L1 TTYH3 chr7 2686656 - MAD1L1 chr7 1976533 - Exonic hg19 SKCM TCGA-FS-A1YW-06A 46 24 Out-of-frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 75187 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTYH3-MAD1L1 TTYH3 chr7 2671912 - MAD1L1 chr7 1855864 - Exonic hg19 SKCM TCGA-Z2-AA3V-06A 53 71 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 75188 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTYH3-NOC4L TTYH3 chr7 2671912 - NOC4L chr12 132635526 + Exonic hg19 SKCM TCGA-EB-A3Y7-01A 4 3 Out-of-frame Inter-chr p22.3 q24.33 Seq+ 75189 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TTYH3-NOC4L TTYH3 chr7 2671912 - NOC4L chr12 132635526 + Exonic hg19 PCPG TCGA-S7-A7WW-01A 2 1 Out-of-frame Inter-chr p22.3 q24.33 Seq+ 75190 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUBA1C-TMEM116 TUBA1C chr12 49658967 - TMEM116 chr12 112381173 - Exonic hg19 SARC TCGA-DX-A1L4-01A 21 15 In-Frame Intra-chr q13.12 q24.13 Seq+ 75191 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUBB2A-SLC22A23 TUBB2A chr6 3155859 - SLC22A23 chr6 3324236 - Exonic hg19 LUAD TCGA-55-A493-01A 12 5 In-Frame Intra-chr p25.2 p25.2 Seq+ 75192 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUBB3-RSPRY1 TUBB3 chr16 89989866 - RSPRY1 chr16 57238416 + Exonic hg19 MESO TCGA-YS-AA4M-01A 26 3 5'UTR-5'UTR Intra-chr q24.3 q13 Seq+ 75193 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUBB3-TRPM5 TUBB3 chr16 89989866 - TRPM5 chr11 2439821 - Exonic hg19 PRAD TCGA-V1-A9ZI-01A 10 3 Out-of-frame Inter-chr q24.3 p15.5 Seq+ 75194 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUBB6-OSBPL1A TUBB6 chr18 12308794 - OSBPL1A chr18 21761243 - Exonic hg19 STAD TCGA-D7-A6EV-01A 2 39 Out-of-frame Intra-chr p11.21 q11.2 Seq+ 75195 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUBB6-ROBO1 TUBB6 chr18 12311052 - ROBO1 chr3 78685258 - Exonic hg19 BRCA TCGA-A7-A5ZV-01A 14 8 In-Frame Inter-chr p11.21 p12.3 Tumor suppressor gene Seq+ 75196 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUBD1-CDK12 TUBD1 chr17 57943970 - CDK12 chr17 37667782 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 117 46 Out-of-frame Intra-chr q23.1 q12 Oncogene Seq+ 75197 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUBD1-HEATR6 TUBD1 chr17 57970058 - HEATR6 chr17 58128338 - Exonic hg19 BRCA TCGA-BH-A1FM-01A 15 7 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 75198 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUBD1-INPP5D TUBD1 chr17 57963444 - INPP5D chr2 234091056 + Exonic hg19 HNSC TCGA-BB-4217-01A 5 5 Out-of-frame Inter-chr q23.1 Seq+ 75199 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUBD1-RPS6KB1 TUBD1 chr17 57970058 - RPS6KB1 chr17 57987923 + Exonic hg19 LUAD TCGA-69-7978-01A 5 23 5'UTR-CDS Intra-chr q23.1 q23.1 Oncogene Seq+ 75200 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUBD1-TIAF1 TUBD1 chr17 57970058 - TIAF1 chr17 27401932 - Exonic hg19 BRCA TCGA-3C-AALI-01A 7 19 5'UTR-5'UTR Intra-chr q23.1 q11.2 Oncogene Seq+ 75201 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUBD1-TOM1L1 TUBD1 chr17 57963444 - TOM1L1 chr17 52990027 + Exonic hg19 LUAD TCGA-55-6969-01A 4 3 Out-of-frame Intra-chr q23.1 q22 Seq+ 75202 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUBD1-USP32 TUBD1 chr17 57970058 - USP32 chr17 58270291 - Exonic hg19 LUAD TCGA-49-6745-01A 2 4 5'UTR-CDS Intra-chr q23.1 q23.2 Seq+ 75203 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUBD1-USP32 TUBD1 chr17 57951900 - USP32 chr17 58300947 - Exonic hg19 LIHC TCGA-DD-A1EJ-01A 5 3 In-Frame Intra-chr q23.1 q23.2 Seq+ 75204 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUBD1-VMP1 TUBD1 chr17 57941025 - VMP1 chr17 57816198 + Exonic hg19 LUAD TCGA-05-4427-01A 3 91 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 75205 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUBD1-VMP1 TUBD1 chr17 57963444 - VMP1 chr17 57851115 + Exonic hg19 LIHC TCGA-DD-AADC-01A 4 6 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 75206 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUBGCP2-SORBS1 TUBGCP2 chr10 135111456 - SORBS1 chr10 97144042 - Exonic hg19 SARC TCGA-DX-A8BM-01A 11 7 In-Frame Intra-chr q26.3 q24.1 Seq+ 75207 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUBGCP2-UBE4A TUBGCP2 chr10 135116296 - UBE4A chr11 118261372 + Exonic hg19 PRAD TCGA-EJ-5522-01A 5 4 Out-of-frame Inter-chr q26.3 q23.3 Seq+ 75208 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUBGCP3-ATP11A TUBGCP3 chr13 113158346 - ATP11A chr13 113490492 + Exonic hg19 LUAD TCGA-69-7979-01A 11 14 Out-of-frame Intra-chr q34 Seq+ 75209 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUBGCP3-FARP1 TUBGCP3 chr13 113200013 - FARP1 chr13 99098352 + Exonic hg19 BRCA TCGA-GM-A2DF-01A 40 26 In-Frame Intra-chr q32.2 Seq+ 75210 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUBGCP3-TFDP1 TUBGCP3 chr13 113219425 - TFDP1 chr13 114265311 + Exonic hg19 HNSC TCGA-CV-7416-01A 25 148 In-Frame Intra-chr q34 Transcription factor Seq+ 75211 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUBGCP4-TMEM62 TUBGCP4 chr15 43678528 - TMEM62 chr15 43452879 + Exonic hg19 BLCA TCGA-FJ-A3ZF-01A 7 8 In-Frame Intra-chr q15.3 q15.2 Seq+ 75212 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUBGCP4-TMEM62 TUBGCP4 chr15 43678528 - TMEM62 chr15 43470805 + Exonic hg19 BRCA TCGA-UU-A93S-01A 5 2 Out-of-frame Intra-chr q15.3 q15.2 Seq+ 75213 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUBGCP5-KCNU1 TUBGCP5 chr15 22872499 - KCNU1 chr8 36763226 + Exonic hg19 READ TCGA-CL-5917-01A 7 1 Out-of-frame Inter-chr q11.2 p11.23 75214 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUBGCP5-ZCCHC11 TUBGCP5 chr15 22870003 - ZCCHC11 chr1 52902635 - Exonic hg19 SARC TCGA-DX-A23U-01A 11 5 Out-of-frame Inter-chr q11.2 p32.3 Seq+ 75215 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUBGCP6-PLXNB2 TUBGCP6 chr22 50682148 - PLXNB2 chr22 50723094 - Exonic hg19 UCEC TCGA-EO-A22X-01A 15 4 In-Frame Intra-chr q13.33 q13.33 Seq+ 75216 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUFT1-CGN TUFT1 chr1 151537090 - CGN chr1 151492642 + Exonic hg19 LUAD TCGA-44-6775-01A 10 8 In-Frame Intra-chr q21.3 q21.3 Seq+ 75217 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUFT1-CGN TUFT1 chr1 151512902 - CGN chr1 151509206 + Exonic hg19 HNSC TCGA-CV-7261-01A 14 5 In-Frame Intra-chr q21.3 q21.3 Seq+ 75218 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUFT1-CGN TUFT1 chr1 151512902 - CGN chr1 151490982 + Exonic hg19 LIHC TCGA-UB-A7MA-01A 2 2 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 75219 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUFT1-MLL5 TUFT1 chr1 151538704 - MLL5 chr7 104749389 + Exonic hg19 COAD TCGA-A6-5660-01A 2 3 In-Frame Inter-chr q21.3 Seq+ 75220 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUFT1-PKN2 TUFT1 chr1 151512902 - PKN2 chr1 89206671 + Exonic hg19 SARC TCGA-DX-A23U-01A 13 5 In-Frame Intra-chr q21.3 p22.2 AGC:PKN Seq+ 75221 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TULP3-C12orf57 TULP3 chr12 3018746 - C12orf57 chr12 7054934 + Exonic hg19 LGG TCGA-DU-6407-02A 29 31 Out-of-frame Intra-chr p13.33 p13.31 Seq+ 75222 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TULP3-CTD-2021H9.3 TULP3 chr12 3000154 - CTD-2021H9.3 chr12 71441459 - Exonic hg19 SARC TCGA-DX-A1KZ-01A 172 75 Out-of-frame Intra-chr p13.33 75223 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TULP3-FAM190B TULP3 chr12 3043727 - FAM190B chr10 86177527 + Exonic hg19 SARC TCGA-DX-A1KZ-01A 13 11 In-Frame Inter-chr p13.33 75224 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TULP3-GGNBP2 TULP3 chr12 3043727 - GGNBP2 chr17 34937774 + Exonic hg19 LUSC TCGA-34-8456-01A 5 8 In-Frame Inter-chr p13.33 Tumor suppressor gene Seq+ 75225 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TULP3-UGCG TULP3 chr12 3043727 - UGCG chr9 114676885 + Exonic hg19 SARC TCGA-DX-A1KZ-01A 2 4 Out-of-frame Inter-chr p13.33 q31.3 Seq+ 75226 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TULP4-ESR1 TULP4 chr6 158735300 - ESR1 chr6 152201790 + Exonic hg19 LUSC TCGA-66-2788-01A 10 8 Out-of-frame Intra-chr q25.3 q25.1 Oncogene Tumor suppressor gene Transcription factor Seq+ 75227 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TULP4-SPSB4 TULP4 chr6 158735300 - SPSB4 chr3 140865984 + Exonic hg19 CESC TCGA-ZJ-AB0I-01A 7 3 Out-of-frame Inter-chr q25.3 q23 Seq+ 75228 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TULP4-ZDHHC14 TULP4 chr6 158735300 - ZDHHC14 chr6 158068291 + Exonic hg19 BLCA TCGA-FD-A3SJ-01A 28 17 In-Frame Intra-chr q25.3 q25.3 Seq+ 75229 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUSC2-RASSF1 TUSC2 chr3 50365385 - RASSF1 chr3 50369585 - Exonic hg19 PAAD TCGA-2L-AAQI-01A 12 15 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene Seq+ 75230 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUSC3-HOOK3 TUSC3 chr8 15398077 - HOOK3 chr8 42819454 + Exonic hg19 UCS TCGA-N5-A4R8-01A 11 8 In-Frame Intra-chr p22 p11.21 Oncogene Seq+ 75231 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUSC3-LOXL2 TUSC3 chr8 15601121 - LOXL2 chr8 23225947 - Exonic hg19 PRAD TCGA-HC-7210-01A 18 12 CDS-5'UTR Intra-chr p22 p21.3 Seq+ 75232 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUSC3-SORBS3 TUSC3 chr8 15480758 - SORBS3 chr8 22421500 + Exonic hg19 BRCA TCGA-AO-A03T-01A 5 2 In-Frame Intra-chr p22 p21.3 Seq+ 75233 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TUT1-BSCL2 TUT1 chr11 62356503 - BSCL2 chr11 62462183 - Exonic hg19 BRCA TCGA-B6-A0I1-01A 258 155 In-Frame Intra-chr q12.3 q12.3 Seq+ 75234 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TWF2-ALAS1 TWF2 chr3 52273008 - ALAS1 chr3 52242099 + Exonic hg19 UCS TCGA-N8-A4PI-01A 18 9 In-Frame Intra-chr p21.2 p21.2 Seq+ 75235 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TWF2-FSTL4 TWF2 chr3 52273008 - FSTL4 chr5 132569229 - Exonic hg19 BLCA TCGA-BL-A0C8-01A 10 7 Out-of-frame Inter-chr p21.2 q31.1 Seq+ 75236 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TWF2-WDR82 TWF2 chr3 52273008 - WDR82 chr3 52291535 - Exonic hg19 CESC TCGA-EK-A2PG-01A 16 12 Out-of-frame Intra-chr p21.2 p21.2 Seq+ 75237 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TXLNB-CDC14A TXLNB chr6 139597967 - CDC14A chr1 100949848 + Exonic hg19 BRCA TCGA-E9-A3QA-01A 3 6 Out-of-frame Inter-chr q24.1 p21.2 Seq+ 75238 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TXLNB-PDLIM1 TXLNB chr6 139609613 - PDLIM1 chr10 96998442 - Exonic hg19 SARC TCGA-DX-A1KZ-01A 21 14 Out-of-frame Inter-chr q24.1 q23.33 Seq+ 75239 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TXN-NDST3 TXN chr9 113013100 - NDST3 chr4 119059209 + Exonic hg19 GBM TCGA-14-0871-01A 2 3 In-Frame Inter-chr q31.3 q26 Seq+ 75240 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TXNDC11-BAMBI TXNDC11 chr16 11836333 - BAMBI chr10 28970187 + Exonic hg19 ACC TCGA-OR-A5K5-01A 8 11 Out-of-frame Inter-chr p13.13 p12.1 Seq+ 75241 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TXNDC11-CIB4 TXNDC11 chr16 11829873 - CIB4 chr2 26863435 - Exonic hg19 ACC TCGA-OR-A5K5-01A 27 16 In-Frame Inter-chr p13.13 p23.3 Seq+ 75242 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TXNDC11-GSPT1 TXNDC11 chr16 11836333 - GSPT1 chr16 11980788 - Exonic hg19 OV TCGA-10-0934-01A 15 14 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 75243 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TXNDC11-RP11-166B2.1 TXNDC11 chr16 11824501 - RP11-166B2.1 chr16 12031525 - Exonic hg19 LIHC TCGA-FV-A496-01A 5 3 Out-of-frame Intra-chr p13.13 75244 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TXNDC11-ZC3H7A TXNDC11 chr16 11836333 - ZC3H7A chr16 11850226 - Exonic hg19 BRCA TCGA-E2-A15A-01A 5 4 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 75245 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TXNDC11-ZC3H7A TXNDC11 chr16 11836333 - ZC3H7A chr16 11850226 - Exonic hg19 BRCA TCGA-E2-A15A-06A 5 15 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 75246 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TXNDC15-ARPC2 TXNDC15 chr5 134210220 - ARPC2 chr2 219103387 + Exonic hg19 GBM TCGA-06-5415-01A 22 66 In-Frame Inter-chr q31.1 q35 Seq+ 75247 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TXNDC15-ODZ2 TXNDC15 chr5 134210220 - ODZ2 chr5 167379593 + Exonic hg19 HNSC TCGA-F7-A61V-01A 4 1 In-Frame Intra-chr q31.1 75248 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TXNDC16-ARG2 TXNDC16 chr14 53009089 - ARG2 chr14 68108903 + Exonic hg19 PRAD TCGA-HC-7233-01A 26 18 CDS-5'UTR Intra-chr q22.1 q24.1 Seq+ 75249 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TXNDC16-GPR137C TXNDC16 chr14 52936755 - GPR137C chr14 53098878 + Exonic hg19 BRCA TCGA-C8-A26V-01A 13 4 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 75250 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TXNDC17-YBX2 TXNDC17 chr17 6544547 - YBX2 chr17 7196857 - Exonic hg19 SKCM TCGA-ER-A2NE-06A 19 10 In-Frame Intra-chr p13.1 p13.1 Transcription factor Seq+ 75251 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TXNDC5-RREB1 TXNDC5 chr6 7895339 - RREB1 chr6 7176888 + Exonic hg19 PRAD TCGA-EJ-7782-01A 14 5 CDS-5'UTR Intra-chr p24.3 p24.3 Transcription factor Seq+ 75252 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TXNL1-LRP1B TXNL1 chr18 54305574 - LRP1B chr2 141299540 - Exonic hg19 BLCA TCGA-G2-A2EF-01A 4 5 Out-of-frame Inter-chr q21.31 q22.2 Oncogene Tumor suppressor gene Seq+ 75253 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TXNRD1-GLT8D2 TXNRD1 chr12 104682818 - GLT8D2 chr12 104415269 - Exonic hg19 LUSC TCGA-33-AASB-01A 637 399 5'UTR-5'UTR Intra-chr q23.3 q23.3 Seq+ 75254 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TXNRD1-HCFC2 TXNRD1 chr12 104682818 - HCFC2 chr12 104474524 + Exonic hg19 LUSC TCGA-43-2578-01A 54 19 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 75255 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TXNRD1-LAMTOR3 TXNRD1 chr12 104707095 - LAMTOR3 chr4 100803224 - Exonic hg19 LUSC TCGA-98-A53A-01A 11 5 In-Frame Inter-chr q23.3 q23 Seq+ 75256 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TXNRD1-SLC41A2 TXNRD1 chr12 104721449 - SLC41A2 chr12 105239752 - Exonic hg19 SARC TCGA-DX-A48N-01A 54 19 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 75257 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TXNRD1-USP30 TXNRD1 chr12 104682818 - USP30 chr12 109505329 + Exonic hg19 BRCA TCGA-C8-A275-01A 29 32 Out-of-frame Intra-chr q23.3 q24.11 Seq+ 75258 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TXNRD2-EVX1 TXNRD2 chr22 19918553 - EVX1 chr7 27284667 + Exonic hg19 SARC TCGA-HB-A3YV-01A 4 6 In-Frame Inter-chr q11.21 p15.2 Transcription factor Seq+ 75259 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TXNRD2-RTN4R TXNRD2 chr22 19918553 - RTN4R chr22 20230633 - Exonic hg19 UCEC TCGA-D1-A3JP-01A 6 11 In-Frame Intra-chr q11.21 q11.21 Seq+ 75260 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TYK2-CDC37 TYK2 chr19 10488890 - CDC37 chr19 10504117 - Exonic hg19 BRCA TCGA-A2-A0D0-01A 82 29 Out-of-frame Intra-chr p13.2 TK:JakA p13.2 Seq+ 75261 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TYK2-SHC2 TYK2 chr19 10468440 - SHC2 chr19 430747 - Exonic hg19 BRCA TCGA-BH-A0BP-01A 8 3 In-Frame Intra-chr p13.2 TK:JakA p13.3 Seq+ 75262 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TYK2-SYMPK TYK2 chr19 10467244 - SYMPK chr19 46347458 - Exonic hg19 UCS TCGA-N9-A4Q7-01A 7 5 In-Frame Intra-chr p13.2 TK:JakA q13.32 Seq+ 75263 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TYK2-TMEM205 TYK2 chr19 10490291 - TMEM205 chr19 11456304 - Exonic hg19 ESCA TCGA-VR-A8Q7-01A 5 147 5'UTR-5'UTR Intra-chr p13.2 TK:JakA p13.2 Seq+ 75264 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TYMP-PPP6R2 TYMP chr22 50968333 - PPP6R2 chr22 50810449 + Exonic hg19 LUAD TCGA-75-7031-01A 15 9 5'UTR-5'UTR Intra-chr q13.33 q13.33 Seq+ 75265 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TYMS-YES1 TYMS chr18 662320 - YES1 chr18 732965 - Exonic hg19 LUSC TCGA-85-8353-01A 111 75 3'UTR-CDS Intra-chr p11.32 p11.32 Seq+ 75266 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TYR-MMP20 TYR chr11 88924586 - MMP20 chr11 102480761 - Exonic hg19 SKCM TCGA-EB-A57M-01A 147 63 In-Frame Intra-chr q14.3 q22.2 Seq+ 75267 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TYW1-AC100793.1 TYW1 chr7 66520874 - AC100793.1 chr17 40912729 - Exonic hg19 ESCA TCGA-LN-A49L-01A 2 9 Out-of-frame Inter-chr q11.21 q21.2 75268 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TYW1-C7orf42 TYW1 chr7 66463941 - C7orf42 chr7 66420489 + Exonic hg19 LUAD TCGA-64-5781-01A 3 11 In-Frame Intra-chr q11.21 Seq+ 75269 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TYW1-C7orf42 TYW1 chr7 66582605 - C7orf42 chr7 66406835 + Exonic hg19 BRCA TCGA-C8-A26X-01A 4 6 CDS-5'UTR Intra-chr q11.21 Seq+ 75270 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TYW1-RP11-366L20.2 TYW1 chr7 66463941 - RP11-366L20.2 chr12 66245432 - Exonic hg19 LUAD TCGA-50-5055-01A 8 4 Out-of-frame Inter-chr q11.21 75271 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TYW1-RP11-571M6.15 TYW1 chr7 66463941 - RP11-571M6.15 chr12 58176893 + Exonic hg19 LUAD TCGA-50-5055-01A 2 3 Out-of-frame Inter-chr q11.21 75272 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TYW1-TRA2A TYW1 chr7 66582605 - TRA2A chr7 23552701 - Exonic hg19 STAD TCGA-CG-4443-01A 9 8 In-Frame Intra-chr q11.21 p15.3 75273 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TYW1-WBSCR17 TYW1 chr7 66582605 - WBSCR17 chr7 71142196 + Exonic hg19 PRAD TCGA-CH-5750-01A 10 3 In-Frame Intra-chr q11.21 q11.22 Seq+ 75274 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq U2AF2-NLRP9 U2AF2 chr19 56181058 - NLRP9 chr19 56220410 - Exonic hg19 LUSC TCGA-33-4547-01A 148 136 Out-of-frame Intra-chr q13.42 q13.42 Seq+ 75275 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq U2AF2-RERE U2AF2 chr19 56172555 - RERE chr1 8426034 - Exonic hg19 BRCA TCGA-AR-A0TS-01A 15 6 In-Frame Inter-chr q13.42 p36.23 Seq+ 75276 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UACA-LTK UACA chr15 70957001 - LTK chr15 41799372 - Exonic hg19 THCA TCGA-FY-A3R6-01A 54 24 Out-of-frame Intra-chr q23 q15.1 TK:ALK Oncogene Seq+ 75277 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UACA-PTPN6 UACA chr15 70987356 - PTPN6 chr12 7069090 + Exonic hg19 LIHC TCGA-2Y-A9H0-01A 6 9 Out-of-frame Inter-chr q23 p13.31 Tumor suppressor gene Seq+ 75278 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UAP1-BCL9 UAP1 chr1 162536138 - BCL9 chr1 147090622 + Exonic hg19 BRCA TCGA-AR-A2LR-01A 19 19 Out-of-frame Intra-chr q23.3 q21.2 Oncogene Seq+ 75279 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UAP1-LIX1L UAP1 chr1 162536138 - LIX1L chr1 145487304 + Exonic hg19 PRAD TCGA-VP-A87B-01A 6 7 In-Frame Intra-chr q23.3 q21.1 Seq+ 75280 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UAP1-MDM2 UAP1 chr1 162531567 - MDM2 chr12 69202988 + Exonic hg19 LUAD TCGA-05-4382-01A 2 2 5'UTR-CDS Inter-chr q23.3 q15 Oncogene Seq+ 75281 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UAP1-NOS1AP UAP1 chr1 162536138 - NOS1AP chr1 162257134 + Exonic hg19 LUSC TCGA-77-8139-01A 7 4 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 75282 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UAP1-TSHZ2 UAP1 chr1 162551249 - TSHZ2 chr20 52103683 + Exonic hg19 BRCA TCGA-E9-A22D-01A 553 400 CDS-3'UTR Inter-chr q23.3 q13.2 Transcription factor Seq+ 75283 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBA1-ELK3 UBA1 chrX 47074525 - ELK3 chr12 96588323 + Exonic hg19 LUSC TCGA-94-8491-01A 2 5 Out-of-frame Inter-chr p11.3 q23.1 Transcription factor 75284 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBA2-GPI UBA2 chr19 34919475 - GPI chr19 34869839 + Exonic hg19 CESC TCGA-C5-A1MQ-01A 27 22 In-Frame Intra-chr q13.11 Seq+ 75285 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBA2-MIER2 UBA2 chr19 34941269 - MIER2 chr19 334542 - Exonic hg19 ESCA TCGA-L5-A4OQ-01A 5 42 In-Frame Intra-chr q13.11 p13.3 Seq+ 75286 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBA2-PDCD2L UBA2 chr19 34936026 - PDCD2L chr19 34916895 + Exonic hg19 OV TCGA-29-1697-01A 7 48 Out-of-frame Intra-chr q13.11 q13.11 KB Pub Seq+ 75287 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBA3-FRMD4B UBA3 chr3 69120686 - FRMD4B chr3 69225807 - Exonic hg19 BRCA TCGA-BH-A0WA-01A 8 12 Out-of-frame Intra-chr p14.1 p14.1 Seq+ 75288 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBA3-FRMD4B UBA3 chr3 69120686 - FRMD4B chr3 69225807 - Exonic hg19 UCEC TCGA-BK-A139-01A 4 14 Out-of-frame Intra-chr p14.1 p14.1 Seq+ 75289 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBA3-FRMD4B UBA3 chr3 69120686 - FRMD4B chr3 69225807 - Exonic hg19 UCEC TCGA-BK-A139-02A 14 5 Out-of-frame Intra-chr p14.1 p14.1 Seq+ 75290 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBA6-CCNA2 UBA6 chr4 68566767 - CCNA2 chr4 122742246 - Exonic hg19 LIHC TCGA-DD-A3A5-01A 2 5 Out-of-frame Intra-chr q13.2 q27 Seq+ 75291 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBA6-STAP1 UBA6 chr4 68504661 - STAP1 chr4 68472014 + Exonic hg19 BRCA TCGA-A2-A4S3-01A 3 1 Out-of-frame Intra-chr q13.2 q13.2 75292 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBA6-TMPRSS11D UBA6 chr4 68494789 - TMPRSS11D chr4 68725396 - Exonic hg19 LUSC TCGA-XC-AA0X-01A 3 1 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 75293 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBAC1-QSOX2 UBAC1 chr9 138839644 - QSOX2 chr9 139118720 - Exonic hg19 LUAD TCGA-38-4630-01A 9 4 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 75294 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBAC1-SHANK2 UBAC1 chr9 138852871 - SHANK2 chr11 70935842 - Exonic hg19 SKCM TCGA-ER-A19T-01A 30 11 CDS-5'UTR Inter-chr q34.3 q13.4 Seq+ 75295 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBAC1-SHANK2 UBAC1 chr9 138852871 - SHANK2 chr11 70935842 - Exonic hg19 SKCM TCGA-ER-A19T-06A 10 3 CDS-5'UTR Inter-chr q34.3 q13.4 Seq+ 75296 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBAC2-ASNS UBAC2 chr13 99896878 - ASNS chr7 97499125 - Exonic hg19 LIHC TCGA-G3-A7M9-01A 6 4 5'UTR-5'UTR Inter-chr q32.3 q21.3 Seq+ 75297 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBAC2-SARM1 UBAC2 chr13 99853193 - SARM1 chr17 26711376 + Exonic hg19 SKCM TCGA-FS-A1ZM-06A 4 4 Out-of-frame Inter-chr q32.3 q11.2 Seq+ 75298 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBAC2-SPTB UBAC2 chr13 99896878 - SPTB chr14 65216872 - Exonic hg19 BRCA TCGA-B6-A1KN-01A 3 3 In-Frame Inter-chr q32.3 q23.3 75299 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBAP1-ADAMTSL1 UBAP1 chr9 34234338 - ADAMTSL1 chr9 18504827 + Exonic hg19 LGG TCGA-TQ-A7RW-01A 4 5 In-Frame Intra-chr p13.3 p22.2 Seq+ 75300 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBAP1-UBAP2 UBAP1 chr9 34234338 - UBAP2 chr9 33998862 - Exonic hg19 BRCA TCGA-A8-A08I-01A 41 34 In-Frame Intra-chr p13.3 p13.3 75301 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBAP1-UNC13B UBAP1 chr9 34220946 - UNC13B chr9 35258990 + Exonic hg19 LUSC TCGA-O2-A5IB-01A 15 8 In-Frame Intra-chr p13.3 p13.3 Seq+ 75302 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBAP2-APTX UBAP2 chr9 34017048 - APTX chr9 32987844 - Exonic hg19 LUAD TCGA-78-7150-01A 24 14 CDS-3'UTR Intra-chr p13.3 p21.1 Seq+ 75303 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBAP2-C15orf41 UBAP2 chr9 33923184 - C15orf41 chr15 37100525 + Exonic hg19 OV TCGA-61-2109-01A 2 3 Out-of-frame Inter-chr p13.3 q14 Seq+ 75304 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBAP2-DCAF12 UBAP2 chr9 34017048 - DCAF12 chr9 34107563 - Exonic hg19 LUAD TCGA-MN-A4N4-01A 2 2 In-Frame Intra-chr p13.3 p13.3 75305 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBAP2-LINGO2 UBAP2 chr9 33932560 - LINGO2 chr9 27950704 - Exonic hg19 BLCA TCGA-XF-AAMW-01A 7 3 CDS-5'UTR Intra-chr p13.3 p21.1 Seq+ 75306 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBAP2-NCF4 UBAP2 chr9 33986758 - NCF4 chr22 37271695 + Exonic hg19 GBM TCGA-19-2625-01A 4 13 Out-of-frame Inter-chr p13.3 Seq+ 75307 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBAP2-SLC26A7 UBAP2 chr9 33960824 - SLC26A7 chr8 92301364 + Exonic hg19 LUSC TCGA-77-7138-01A 4 4 Out-of-frame Inter-chr p13.3 q21.3 Seq+ 75308 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBAP2-TEAD1 UBAP2 chr9 33996221 - TEAD1 chr11 12901255 + Exonic hg19 BRCA TCGA-A8-A08G-01A 18 9 In-Frame Inter-chr p13.3 p15.3 Transcription factor Seq+ 75309 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBAP2-USP34 UBAP2 chr9 34017048 - USP34 chr2 61512092 - Exonic hg19 BRCA TCGA-BH-A1F2-01A 9 3 In-Frame Inter-chr p13.3 p15 75310 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBAP2L-EEFSEC UBAP2L chr1 154214041 - EEFSEC chr3 128126912 + Exonic hg19 LUSC TCGA-37-4130-01A 61 56 Out-of-frame Inter-chr q21.3 q21.3 Seq+ 75311 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBASH3A-SFTA2 UBASH3A chr21 43857690 - SFTA2 chr6 30899572 - Exonic hg19 UCS TCGA-N5-A4RJ-01A 11 1 In-Frame Inter-chr q22.3 Seq+ 75312 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBASH3B-GRIK4 UBASH3B chr11 122526918 - GRIK4 chr11 120823564 + Exonic hg19 SKCM TCGA-FR-A3YO-06A 29 15 Out-of-frame Intra-chr q24.1 q23.3 Seq+ 75313 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBB-STARD9 UBB chr17 16286054 - STARD9 chr15 42986726 + Exonic hg19 SARC TCGA-JV-A75J-01A 2 1 3'UTR-CDS Inter-chr p11.2 q15.2 75314 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2CBP-SERPINB1 UBE2CBP chr6 83775361 - SERPINB1 chr6 2840828 - Exonic hg19 BRCA TCGA-EW-A424-01A 13 9 Out-of-frame Intra-chr p25.2 75315 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2D1-MFSD11 UBE2D1 chr10 60094985 - MFSD11 chr17 74771079 + Exonic hg19 SARC TCGA-SI-A71O-01A 2 1 Out-of-frame Inter-chr q21.1 q25.1 Seq+ 75316 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2D2-ARHGAP26 UBE2D2 chr5 138994551 - ARHGAP26 chr5 142434004 + Exonic hg19 LUSC TCGA-85-A4QQ-01A 9 7 In-Frame Intra-chr q31.2 q31.3 Seq+ 75317 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2D2-CTNNA1 UBE2D2 chr5 138980020 - CTNNA1 chr5 138221901 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 16 10 Out-of-frame Intra-chr q31.2 q31.2 Oncogene Seq+ 75318 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2D2-PAIP2 UBE2D2 chr5 138906197 - PAIP2 chr5 138699448 + Exonic hg19 OV TCGA-61-1738-01A 18 62 5'UTR-5'UTR Intra-chr q31.2 q31.2 Tumor suppressor gene Seq+ 75319 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2D2-SND1 UBE2D2 chr5 138941400 - SND1 chr7 127714554 + Exonic hg19 LUAD TCGA-95-7562-01A 26 24 In-Frame Inter-chr q31.2 q32.1 Seq+ 75320 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2D3-CA10 UBE2D3 chr4 103747642 - CA10 chr17 49726615 - Exonic hg19 PRAD TCGA-EJ-7781-01A 87 148 In-Frame Inter-chr q24 q22 Seq+ 75321 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2D3-GSTCD UBE2D3 chr4 103747642 - GSTCD chr4 106744111 + Exonic hg19 PRAD TCGA-V1-A8WS-01A 20 40 Out-of-frame Intra-chr q24 q24 Seq+ 75322 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2D3-SLC9B1 UBE2D3 chr4 103789872 - SLC9B1 chr4 103832694 - Exonic hg19 LUSC TCGA-66-2771-01A 2 1 Out-of-frame Intra-chr q24 q24 Seq+ 75323 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2D3-SLC9B1 UBE2D3 chr4 103789872 - SLC9B1 chr4 103912869 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 5 7 5'UTR-5'UTR Intra-chr q24 q24 Seq+ 75324 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2E1-RAB14 UBE2E1 chr3 23853001 - RAB14 chr9 123955697 - Exonic hg19 SKCM TCGA-WE-AA9Y-06A 5 2 CDS-5'UTR Inter-chr p24.2 q33.2 Seq+ 75325 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2E2-FAM179B UBE2E2 chr3 23258803 - FAM179B chr14 45512889 + Exonic hg19 LUSC TCGA-21-5787-01A 6 8 In-Frame Inter-chr p24.3 Seq+ 75326 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2E2-SEMA3A UBE2E2 chr3 23258803 - SEMA3A chr7 83643667 - Exonic hg19 LGG TCGA-FG-5963-02A 8 9 Out-of-frame Inter-chr p24.3 q21.11 Seq+ 75327 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2E2-ZNF385D UBE2E2 chr3 23258803 - ZNF385D chr3 21706520 - Exonic hg19 PRAD TCGA-2A-A8W1-01A 15 23 Out-of-frame Intra-chr p24.3 p24.3 Transcription factor Seq+ 75328 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2E3-TECPR2 UBE2E3 chr2 181848820 - TECPR2 chr14 102963316 + Exonic hg19 SKCM TCGA-D9-A4Z5-01A 6 28 Out-of-frame Inter-chr q31.3 q32.31 Seq+ 75329 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2F-RAMP1 UBE2F chr2 238925275 - RAMP1 chr2 238820170 + Exonic hg19 BRCA TCGA-LL-A9Q3-01A 51 51 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 75330 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2G1-AC091153.1 UBE2G1 chr17 4269566 - AC091153.1 chr17 4580107 - Exonic hg19 OV TCGA-20-1684-01A 12 13 Out-of-frame Intra-chr p13.2 p13.2 75331 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2G1-PPIL2 UBE2G1 chr17 4269566 - PPIL2 chr22 22024202 + Exonic hg19 UCS TCGA-NF-A5CP-01A 31 14 Out-of-frame Inter-chr p13.2 q11.21 Seq+ 75332 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2G1-SPNS3 UBE2G1 chr17 4269566 - SPNS3 chr17 4381867 + Exonic hg19 BRCA TCGA-A8-A08J-01A 50 48 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 75333 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2G2-ABCG1 UBE2G2 chr21 46207835 - ABCG1 chr21 43704670 + Exonic hg19 PAAD TCGA-3E-AAAY-01A 28 18 In-Frame Intra-chr q22.3 q22.3 Seq+ 75334 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2G2-GART UBE2G2 chr21 46197214 - GART chr21 34897307 - Exonic hg19 LUAD TCGA-55-A493-01A 36 13 In-Frame Intra-chr q22.3 Seq+ 75335 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2G2-SON UBE2G2 chr21 46207835 - SON chr21 34918519 + Exonic hg19 SKCM TCGA-RP-A693-06A 4 1 In-Frame Intra-chr q22.3 q22.11 Transcription factor Seq+ 75336 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2H-LMX1A UBE2H chr7 129588799 - LMX1A chr1 165183050 - Exonic hg19 SARC TCGA-DX-A6BH-01A 8 2 5'UTR-CDS Inter-chr q32.2 q23.3 Transcription factor 75337 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2H-ZC3HC1 UBE2H chr7 129519408 - ZC3HC1 chr7 129668869 - Exonic hg19 HNSC TCGA-F7-A623-01A 8 4 In-Frame Intra-chr q32.2 q32.2 Seq+ 75338 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2H-ZC3HC1 UBE2H chr7 129519408 - ZC3HC1 chr7 129688984 - Exonic hg19 UCS TCGA-N8-A4PL-01A 10 2 Out-of-frame Intra-chr q32.2 q32.2 Seq+ 75339 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2I-CACNA1H UBE2I chr16 1359774 - CACNA1H chr16 1267919 + Exonic hg19 BRCA TCGA-AC-A23H-01A 4 8 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 75340 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2J1-C6orf165 UBE2J1 chr6 90062258 - C6orf165 chr6 88173738 + Exonic hg19 ACC TCGA-OR-A5JY-01A 26 9 Out-of-frame Intra-chr q15 Seq+ 75341 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2J1-RRAGD UBE2J1 chr6 90062258 - RRAGD chr6 90097309 - Exonic hg19 BRCA TCGA-D8-A1JM-01A 43 17 In-Frame Intra-chr q15 q15 Seq+ 75342 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2J2-ACAP3 UBE2J2 chr1 1203242 - ACAP3 chr1 1229579 - Exonic hg19 BRCA TCGA-OL-A66I-01A 123 48 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 75343 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2J2-GNB1 UBE2J2 chr1 1203242 - GNB1 chr1 1736020 - Exonic hg19 BRCA TCGA-BH-A18T-01A 139 104 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 75344 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2K-C13orf30 UBE2K chr4 39700010 - C13orf30 chr13 43360899 + Exonic hg19 LUAD TCGA-86-A4P7-01A 27 16 Out-of-frame Inter-chr p14 75345 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2K-G3BP2 UBE2K chr4 39757359 - G3BP2 chr4 76587233 - Exonic hg19 COAD TCGA-DM-A28A-01A 3 6 CDS-5'UTR Intra-chr p14 q21.1 Seq+ 75346 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2K-LIAS UBE2K chr4 39739133 - LIAS chr4 39471639 + Exonic hg19 LUSC TCGA-L3-A524-01A 42 23 Out-of-frame Intra-chr p14 p14 Seq+ 75347 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2K-LIAS UBE2K chr4 39700010 - LIAS chr4 39462410 + Exonic hg19 BRCA TCGA-UU-A93S-01A 12 3 In-Frame Intra-chr p14 p14 Seq+ 75348 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2K-SLC9B2 UBE2K chr4 39757359 - SLC9B2 chr4 103952965 - Exonic hg19 LIHC TCGA-DD-A1EJ-01A 7 5 Out-of-frame Intra-chr p14 q24 Seq+ 75349 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2O-RNF213 UBE2O chr17 74448807 - RNF213 chr17 78332088 + Exonic hg19 BRCA TCGA-E9-A1N6-01A 5 2 Out-of-frame Intra-chr q25.1 q25.3 Oncogene Seq+ 75350 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2O-SSH2 UBE2O chr17 74448807 - SSH2 chr17 27963820 - Exonic hg19 HNSC TCGA-F7-8298-01A 2 2 Out-of-frame Intra-chr q25.1 q11.2 75351 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2Q1-HPS1 UBE2Q1 chr1 154530703 - HPS1 chr10 100187021 - Exonic hg19 BRCA TCGA-A1-A0SO-01A 26 50 Out-of-frame Inter-chr q21.3 q24.2 Seq+ 75352 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2Q1-MAEL UBE2Q1 chr1 154525212 - MAEL chr1 166974313 + Exonic hg19 BRCA TCGA-AR-A0TT-01A 16 16 Out-of-frame Intra-chr q21.3 q24.1 Seq+ 75353 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2Q1-MYO7A UBE2Q1 chr1 154527211 - MYO7A chr11 76885802 + Exonic hg19 SKCM TCGA-EE-A180-06A 54 45 In-Frame Inter-chr q21.3 q13.5 Seq+ 75354 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2Q2-NRG4 UBE2Q2 chr15 76183355 - NRG4 chr15 76235995 - Exonic hg19 BRCA TCGA-AC-A3EH-01A 17 13 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 75355 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2Q2-ODF3L1 UBE2Q2 chr15 76136187 - ODF3L1 chr15 76017449 + Exonic hg19 BRCA TCGA-D8-A1JK-01A 16 4 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 75356 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2R2-ACO1 UBE2R2 chr9 33817932 - ACO1 chr9 32440463 + Exonic hg19 STAD TCGA-FP-8631-01A 10 56 In-Frame Intra-chr p13.3 p21.1 Seq+ 75357 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2R2-ITLN1 UBE2R2 chr9 33900269 - ITLN1 chr1 160846606 - Exonic hg19 PRAD TCGA-HI-7168-01A 22 13 Out-of-frame Inter-chr p13.3 q23.3 Seq+ 75358 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2R2-KIAA1797 UBE2R2 chr9 33817932 - KIAA1797 chr9 20993252 + Exonic hg19 SARC TCGA-DX-A8BG-01A 18 18 Out-of-frame Intra-chr p13.3 75359 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2R2-NFX1 UBE2R2 chr9 33817932 - NFX1 chr9 33366627 + Exonic hg19 LUSC TCGA-56-7580-01A 4 2 In-Frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 75360 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2R2-PRSS3 UBE2R2 chr9 33817932 - PRSS3 chr9 33796641 + Exonic hg19 LUSC TCGA-60-2719-01A 5 12 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 75361 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2Z-MRPL45 UBE2Z chr17 46990383 - MRPL45 chr17 36462500 + Exonic hg19 BRCA TCGA-3C-AALI-01A 11 18 In-Frame Intra-chr q21.32 q12 Seq+ 75362 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2Z-UTP18 UBE2Z chr17 47000299 - UTP18 chr17 49371264 + Exonic hg19 BRCA TCGA-EW-A6SC-01A 63 83 In-Frame Intra-chr q21.32 q21.33 Seq+ 75363 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE2Z-ZNF652 UBE2Z chr17 46998634 - ZNF652 chr17 47395345 - Exonic hg19 BRCA TCGA-AN-A04C-01A 5 8 CDS-5'UTR Intra-chr q21.32 q21.33 Transcription factor Seq+ 75364 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE3A-CYP19A1 UBE3A chr15 25650608 - CYP19A1 chr15 51535147 - Exonic hg19 BRCA TCGA-A8-A07G-01A 6 8 CDS-5'UTR Intra-chr q11.2 q21.2 Seq+ 75365 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE3A-DTWD1 UBE3A chr15 25620612 - DTWD1 chr15 49917310 + Exonic hg19 CESC TCGA-IR-A3LB-01A 9 14 CDS-5'UTR Intra-chr q11.2 q21.2 Seq+ 75366 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE3A-MYO5C UBE3A chr15 25683636 - MYO5C chr15 52500840 - Exonic hg19 LGG TCGA-DU-A7TC-01A 12 5 5'UTR-CDS Intra-chr q11.2 q21.2 Seq+ 75367 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE3B-GNS UBE3B chr12 109919547 - GNS chr12 65122837 - Exonic hg19 STAD TCGA-KB-A93J-01A 3 29 5'UTR-CDS Intra-chr q24.11 q14.3 Seq+ 75368 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE3C-FAF1 UBE3C chr7 157018233 - FAF1 chr1 51061888 - Exonic hg19 BLCA TCGA-E7-A85H-01A 10 7 Out-of-frame Inter-chr q36.3 p32.3 Seq+ 75369 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE3C-GBX1 UBE3C chr7 157000629 - GBX1 chr7 150846229 - Exonic hg19 LUAD TCGA-49-AAR0-01A 3 4 Out-of-frame Intra-chr q36.3 q36.1 Transcription factor Seq+ 75370 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE3C-PTPRN2 UBE3C chr7 156932032 - PTPRN2 chr7 157997965 - Exonic hg19 HNSC TCGA-CR-7389-01A 29 17 Out-of-frame Intra-chr q36.3 q36.3 Seq+ 75371 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE3C-PTPRN2 UBE3C chr7 156932032 - PTPRN2 chr7 157931207 - Exonic hg19 SARC TCGA-DX-A6Z0-01A 21 9 Out-of-frame Intra-chr q36.3 q36.3 Seq+ 75372 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE4A-INSC UBE4A chr11 118252238 - INSC chr11 15197287 + Exonic hg19 READ TCGA-AF-2690-01A 8 3 In-Frame Intra-chr q23.3 p15.2 Seq+ 75373 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE4B-MED18 UBE4B chr1 10190871 - MED18 chr1 28657108 + Exonic hg19 GBM TCGA-12-3652-01A 3 2 CDS-5'UTR Intra-chr p36.22 Tumor suppressor gene p35.3 Seq+ 75374 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE4B-NMNAT1 UBE4B chr1 10093752 - NMNAT1 chr1 10041089 + Exonic hg19 BRCA TCGA-D8-A1XQ-01A 3 6 Out-of-frame Intra-chr p36.22 Tumor suppressor gene p36.22 75375 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE4B-PDPN UBE4B chr1 10228328 - PDPN chr1 13933668 + Exonic hg19 LUSC TCGA-56-A4BW-01A 8 4 Out-of-frame Intra-chr p36.22 Tumor suppressor gene p36.21 Seq+ 75376 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE4B-PLEKHG5 UBE4B chr1 10093752 - PLEKHG5 chr1 6556629 - Exonic hg19 LUSC TCGA-56-7730-01A 7 3 Out-of-frame Intra-chr p36.22 Tumor suppressor gene p36.31 Oncogene Seq+ 75377 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE4B-RBP7 UBE4B chr1 10132272 - RBP7 chr1 10067628 + Exonic hg19 OV TCGA-13-1510-01A 3 12 In-Frame Intra-chr p36.22 Tumor suppressor gene p36.22 Seq+ 75378 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE4B-RBP7 UBE4B chr1 10093752 - RBP7 chr1 10075840 + Exonic hg19 THYM TCGA-4V-A9QJ-01A 148 52 In-Frame Intra-chr p36.22 Tumor suppressor gene p36.22 Seq+ 75379 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBE4B-RBP7 UBE4B chr1 10093752 - RBP7 chr1 10068231 + Exonic hg19 LUSC TCGA-56-8082-01A 2 1 In-Frame Intra-chr p36.22 Tumor suppressor gene p36.22 Seq+ 75380 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBFD1-TMEM159 UBFD1 chr16 23570997 - TMEM159 chr16 21172406 + Exonic hg19 LGG TCGA-HT-A5RC-01A 13 15 Out-of-frame Intra-chr p12.2 Seq+ 75381 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBL3-CDK8 UBL3 chr13 30423649 - CDK8 chr13 26911704 + Exonic hg19 BLCA TCGA-DK-AA6P-01A 2 4 Out-of-frame Intra-chr q12.3 q12.13 CMGC:CDK Oncogene Seq+ 75382 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBL3-CKAP2 UBL3 chr13 30423649 - CKAP2 chr13 53030658 + Exonic hg19 BLCA TCGA-BL-A3JM-01A 56 86 Out-of-frame Intra-chr q12.3 q14.3 Seq+ 75383 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBL3-CRISPLD2 UBL3 chr13 30346249 - CRISPLD2 chr16 84900503 + Exonic hg19 BRCA TCGA-A2-A0T7-01A 8 7 In-Frame Inter-chr q12.3 q24.1 Seq+ 75384 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBL3-PAN3 UBL3 chr13 30423649 - PAN3 chr13 28748409 + Exonic hg19 BRCA TCGA-AR-A250-01A 7 13 Out-of-frame Intra-chr q12.3 q12.2 Seq+ 75385 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBL3-SUCLA2 UBL3 chr13 30423649 - SUCLA2 chr13 48571158 - Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 4 40 In-Frame Intra-chr q12.3 q14.2 Seq+ 75386 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBL3-ZNF211 UBL3 chr13 30423649 - ZNF211 chr19 58152072 + Exonic hg19 BRCA TCGA-BH-A1EY-01A 45 76 Out-of-frame Inter-chr q12.3 q13.43 Transcription factor Seq+ 75387 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBLCP1-CSNK1A1 UBLCP1 chr5 158696077 - CSNK1A1 chr5 148876423 - Exonic hg19 LIHC TCGA-ZP-A9D4-01A 19 14 In-Frame Intra-chr q33.3 q32 Tumor suppressor gene Seq+ 75388 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBN1-BLNK UBN1 chr16 4927475 - BLNK chr10 98006805 - Exonic hg19 SKCM TCGA-EB-A42Z-01A 4 1 Out-of-frame Inter-chr p13.3 q24.1 Oncogene Tumor suppressor gene 75389 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBN1-LAMA5 UBN1 chr16 4911103 - LAMA5 chr20 60937608 - Exonic hg19 BRCA TCGA-D8-A27F-01A 8 1 In-Frame Inter-chr p13.3 q13.33 Seq+ 75390 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBN1-MGRN1 UBN1 chr16 4925435 - MGRN1 chr16 4731551 + Exonic hg19 LUAD TCGA-49-6745-01A 5 3 In-Frame Intra-chr p13.3 p13.3 Seq+ 75391 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBN1-MGRN1 UBN1 chr16 4911103 - MGRN1 chr16 4700366 + Exonic hg19 BRCA TCGA-AR-A1AQ-01A 5 2 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 75392 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBN1-MGRN1 UBN1 chr16 4918904 - MGRN1 chr16 4723499 + Exonic hg19 ESCA TCGA-L5-A4OS-01A 5 19 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 75393 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBOX5-RP5-1187M17.10 UBOX5 chr20 3140412 - RP5-1187M17.10 chr20 3148607 - Exonic hg19 OV TCGA-57-1993-01A 22 3 Out-of-frame Intra-chr p13 75394 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBP1-MAP4 UBP1 chr3 33481228 - MAP4 chr3 48040369 - Exonic hg19 LGG TCGA-E1-A7YU-01A 4 3 CDS-5'UTR Intra-chr p22.3 Transcription factor p21.31 Seq+ 75395 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBP1-SLC24A3 UBP1 chr3 33450728 - SLC24A3 chr20 19565615 + Exonic hg19 SARC TCGA-VT-A80G-01A 42 29 In-Frame Inter-chr p22.3 Transcription factor p11.23 Seq+ 75396 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBQLN1-GKAP1 UBQLN1 chr9 86322415 - GKAP1 chr9 86421475 - Exonic hg19 BRCA TCGA-A2-A25B-01A 8 16 CDS-5'UTR Intra-chr q21.32 q21.32 Seq+ 75397 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBQLN1-NAV3 UBQLN1 chr9 86322415 - NAV3 chr12 78392117 + Exonic hg19 SARC TCGA-DX-A48N-01A 6 5 Out-of-frame Inter-chr q21.32 q21.2 Seq+ 75398 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBR1-SUPV3L1 UBR1 chr15 43258351 - SUPV3L1 chr10 70945743 + Exonic hg19 BRCA TCGA-AO-A03P-01A 11 9 In-Frame Inter-chr q15.2 q22.1 Seq+ 75399 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBR1-TGM5 UBR1 chr15 43276095 - TGM5 chr15 43528035 - Exonic hg19 LUSC TCGA-66-2756-01A 14 6 In-Frame Intra-chr q15.2 q15.2 Seq+ 75400 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBR1-TGM5 UBR1 chr15 43290366 - TGM5 chr15 43552777 - Exonic hg19 ESCA TCGA-JY-A6FB-01A 2 10 In-Frame Intra-chr q15.2 q15.2 Seq+ 75401 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBR2-BYSL UBR2 chr6 42620383 - BYSL chr6 41895112 + Exonic hg19 SARC TCGA-DX-A3LU-01A 2 8 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 75402 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBR2-CDKAL1 UBR2 chr6 42626562 - CDKAL1 chr6 20548824 + Exonic hg19 SARC TCGA-DX-AATS-01A 8 6 In-Frame Intra-chr p21.1 p22.3 Seq+ 75403 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBR2-KANK2 UBR2 chr6 42532135 - KANK2 chr19 11287493 - Exonic hg19 UCEC TCGA-B5-A3S1-01A 31 16 Out-of-frame Inter-chr p21.1 p13.2 Seq+ 75404 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBR2-MED20 UBR2 chr6 42647570 - MED20 chr6 41877260 - Exonic hg19 MESO TCGA-TS-A8AY-01A 4 4 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 75405 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBR2-PXT1 UBR2 chr6 42641931 - PXT1 chr6 36368361 - Exonic hg19 ACC TCGA-OR-A5JY-01A 9 2 Out-of-frame Intra-chr p21.1 p21.31 Seq+ 75406 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBR2-XPO5 UBR2 chr6 42650849 - XPO5 chr6 43501744 - Exonic hg19 PRAD TCGA-KK-A59X-01A 17 7 In-Frame Intra-chr p21.1 p21.1 Tumor suppressor gene Seq+ 75407 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBR4-ALB UBR4 chr1 19437236 - ALB chr4 74270021 + Exonic hg19 LIHC TCGA-DD-A73F-01A 3 1 CDS-5'UTR Inter-chr p36.13 q13.3 75408 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBR4-C1QC UBR4 chr1 19447683 - C1QC chr1 22973720 + Exonic hg19 SARC TCGA-DX-AB2O-01A 48 39 In-Frame Intra-chr p36.13 p36.12 Seq+ 75409 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBR4-HSPG2 UBR4 chr1 19495929 - HSPG2 chr1 22170792 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 3 3 Out-of-frame Intra-chr p36.13 p36.12 Seq+ 75410 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBR4-PAX7 UBR4 chr1 19486605 - PAX7 chr1 19018248 + Exonic hg19 LGG TCGA-DU-8158-01A 3 3 Out-of-frame Intra-chr p36.13 p36.13 Oncogene Transcription factor 75411 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBR5-AC010859.1 UBR5 chr8 103269860 - AC010859.1 chr8 97847201 + Exonic hg19 BRCA TCGA-BH-A0H9-01A 2 1 Out-of-frame Intra-chr q22.3 Oncogene 75412 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBR5-KB-1980E6.3 UBR5 chr8 103424401 - KB-1980E6.3 chr8 103541539 + Exonic hg19 BLCA TCGA-UY-A78M-01A 15 16 Out-of-frame Intra-chr q22.3 Oncogene 75413 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBR5-ODF1 UBR5 chr8 103424401 - ODF1 chr8 103572680 + Exonic hg19 BLCA TCGA-UY-A78M-01A 98 129 In-Frame Intra-chr q22.3 Oncogene q22.3 Seq+ 75414 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBR5-RIMS4 UBR5 chr8 103305833 - RIMS4 chr20 43400057 - Exonic hg19 SKCM TCGA-D9-A4Z3-01A 3 1 Out-of-frame Inter-chr q22.3 Oncogene q13.12 Seq+ 75415 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBR5-SSTR5 UBR5 chr8 103424401 - SSTR5 chr16 1128842 + Exonic hg19 BRCA TCGA-D8-A27L-01A 7 13 CDS-5'UTR Inter-chr q22.3 Oncogene p13.3 Seq+ 75416 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBR5-TRAF3 UBR5 chr8 103269860 - TRAF3 chr14 103352526 + Exonic hg19 HNSC TCGA-MZ-A5BI-01A 4 3 In-Frame Inter-chr q22.3 Oncogene q32.32 Seq+ 75417 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBR7-BTBD7 UBR7 chr14 93686757 - BTBD7 chr14 93723701 - Exonic hg19 BRCA TCGA-AC-A23H-01A 9 6 In-Frame Intra-chr Seq+ 75418 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBTD2-C5orf58 UBTD2 chr5 171710600 - C5orf58 chr5 169672966 + Exonic hg19 SKCM TCGA-FS-A1Z4-06A 3 2 In-Frame Intra-chr q35.1 q35.1 Seq+ 75419 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBTD2-SH3PXD2B UBTD2 chr5 171661126 - SH3PXD2B chr5 171809131 - Exonic hg19 BRCA TCGA-C8-A137-01A 6 11 Out-of-frame Intra-chr q35.1 q35.1 Seq+ 75420 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBTD2-SH3PXD2B UBTD2 chr5 171710600 - SH3PXD2B chr5 171752384 - Exonic hg19 BLCA TCGA-XF-AAMX-01A 21 11 CDS-3'UTR Intra-chr q35.1 q35.1 Seq+ 75421 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBTF-CA10 UBTF chr17 42286720 - CA10 chr17 50008492 - Exonic hg19 COAD TCGA-DM-A0XF-01A 3 3 Out-of-frame Intra-chr q21.31 q22 Seq+ 75422 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBTF-FOXP1 UBTF chr17 42283962 - FOXP1 chr3 71007472 - Exonic hg19 SARC TCGA-DX-A48P-01A 2 1 Out-of-frame Inter-chr q21.31 p13 Oncogene Tumor suppressor gene Transcription factor 75423 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBTF-MAML3 UBTF chr17 42287492 - MAML3 chr4 140812121 - Exonic hg19 PCPG TCGA-P8-A5KC-01A 14 6 In-Frame Inter-chr q21.31 q31.1 Seq+ 75424 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBTF-MAML3 UBTF chr17 42286720 - MAML3 chr4 140812121 - Exonic hg19 PCPG TCGA-PR-A5PF-01A 8 4 In-Frame Inter-chr q21.31 q31.1 Seq+ 75425 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBTF-MAML3 UBTF chr17 42286720 - MAML3 chr4 140812121 - Exonic hg19 PCPG TCGA-PR-A5PH-01A 14 13 In-Frame Inter-chr q21.31 q31.1 Seq+ 75426 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBTF-MAML3 UBTF chr17 42286720 - MAML3 chr4 140812121 - Exonic hg19 PCPG TCGA-QR-A70H-01A 8 5 In-Frame Inter-chr q21.31 q31.1 Seq+ 75427 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBTF-MAML3 UBTF chr17 42287492 - MAML3 chr4 140812121 - Exonic hg19 PCPG TCGA-RW-A686-01A 2 3 In-Frame Inter-chr q21.31 q31.1 Seq+ 75428 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBTF-MAML3 UBTF chr17 42287492 - MAML3 chr4 140812121 - Exonic hg19 PCPG TCGA-RW-A686-06A 2 3 In-Frame Inter-chr q21.31 q31.1 Seq+ 75429 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBTF-MAML3 UBTF chr17 42287492 - MAML3 chr4 140812121 - Exonic hg19 PCPG TCGA-RW-A8AZ-01A 12 12 In-Frame Inter-chr q21.31 q31.1 Seq+ 75430 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBTF-MAML3 UBTF chr17 42286720 - MAML3 chr4 140812121 - Exonic hg19 PCPG TCGA-WB-A80K-01A 50 41 In-Frame Inter-chr q21.31 q31.1 Seq+ 75431 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBXN1-BSCL2 UBXN1 chr11 62444990 - BSCL2 chr11 62460269 - Exonic hg19 BRCA TCGA-AO-A129-01A 6 10 In-Frame Intra-chr q12.3 q12.3 Seq+ 75432 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBXN2B-PHF3 UBXN2B chr8 59352329 - PHF3 chr6 64389901 + Exonic hg19 SARC TCGA-FX-A2QS-01A 5 1 Out-of-frame Inter-chr q12.1 q12 75433 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBXN4-R3HDM1 UBXN4 chr2 136537955 - R3HDM1 chr2 136360070 + Exonic hg19 LUAD TCGA-44-6778-01A 2 4 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 75434 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBXN4-R3HDM1 UBXN4 chr2 136505939 - R3HDM1 chr2 136467003 + Exonic hg19 LUAD TCGA-55-7576-01A 45 31 In-Frame Intra-chr q21.3 q21.3 Seq+ 75435 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBXN4-R3HDM1 UBXN4 chr2 136533921 - R3HDM1 chr2 136437743 + Exonic hg19 BRCA TCGA-A7-A6VY-01A 34 16 In-Frame Intra-chr q21.3 q21.3 Seq+ 75436 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBXN6-ABHD6 UBXN6 chr19 4453927 - ABHD6 chr3 58279316 + Exonic hg19 LIHC TCGA-BC-A10Y-01A 55 26 Out-of-frame Inter-chr p13.3 p14.3 Seq+ 75437 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UBXN7-RPL39L UBXN7 chr3 196159198 - RPL39L chr3 186845850 - Exonic hg19 GBM TCGA-06-5415-01A 54 270 CDS-5'UTR Intra-chr q29 q27.3 Seq+ 75438 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UCHL5-C1orf112 UCHL5 chr1 192990227 - C1orf112 chr1 169818641 + Exonic hg19 SARC TCGA-DX-A1KU-01A 29 13 In-Frame Intra-chr q31.2 q24.2 Seq+ 75439 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UCK2-CD37 UCK2 chr1 165797169 - CD37 chr19 49838971 + Exonic hg19 PRAD TCGA-YL-A8S9-01A 2 1 In-Frame Inter-chr q24.1 q13.33 75440 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UCK2-DARS2 UCK2 chr1 165797169 - DARS2 chr1 173795825 + Exonic hg19 BLCA TCGA-G2-A3VY-01A 5 4 Out-of-frame Intra-chr q24.1 q25.1 Seq+ 75441 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UCK2-MRPL9 UCK2 chr1 165797169 - MRPL9 chr1 151734976 - Exonic hg19 BLCA TCGA-GU-A764-01A 14 10 Out-of-frame Intra-chr q24.1 q21.3 Seq+ 75442 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UCK2-PBX1 UCK2 chr1 165797169 - PBX1 chr1 164761731 + Exonic hg19 OV TCGA-25-1315-01A 13 19 Out-of-frame Intra-chr q24.1 q23.3 Oncogene Transcription factor Seq+ 75443 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UCK2-PBX1 UCK2 chr1 165875206 - PBX1 chr1 164761731 + Exonic hg19 STAD TCGA-VQ-A92D-01A 5 44 In-Frame Intra-chr q24.1 q23.3 Oncogene Transcription factor Seq+ 75444 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UCK2-PBX1 UCK2 chr1 165860559 - PBX1 chr1 164532475 + Exonic hg19 SARC TCGA-X6-A8C6-01A 2 6 In-Frame Intra-chr q24.1 q23.3 Oncogene Transcription factor Seq+ 75445 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UCK2-SNX27 UCK2 chr1 165797169 - SNX27 chr1 151611364 + Exonic hg19 BRCA TCGA-A2-A0YG-01A 16 18 Out-of-frame Intra-chr q24.1 q21.3 Seq+ 75446 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UCK2-TBX19 UCK2 chr1 165797169 - TBX19 chr1 168277980 + Exonic hg19 SARC TCGA-DX-A1L2-01A 2 3 Out-of-frame Intra-chr q24.1 q24.2 Transcription factor Seq+ 75447 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UCKL1-SAMD10 UCKL1 chr20 62587613 - SAMD10 chr20 62608759 - Exonic hg19 BRCA TCGA-AR-A256-01A 3 2 Out-of-frame Intra-chr q13.33 q13.33 75448 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UEVLD-PRMT3 UEVLD chr11 18610160 - PRMT3 chr11 20473676 + Exonic hg19 SARC TCGA-DX-A1KU-01A 52 49 In-Frame Intra-chr p15.1 p15.1 Transcription factor Seq+ 75449 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UFSP2-CCDC110 UFSP2 chr4 186334880 - CCDC110 chr4 186366696 - Exonic hg19 LIHC TCGA-DD-AAVP-01A 3 3 Out-of-frame Intra-chr q35.1 q35.1 Seq+ 75450 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UFSP2-EPHA4 UFSP2 chr4 186347020 - EPHA4 chr2 222365892 - Exonic hg19 HNSC TCGA-T2-A6X0-01A 3 4 Out-of-frame Inter-chr q35.1 q36.1 Seq+ 75451 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UGCG-DNAJC25 UGCG chr9 114677026 - DNAJC25 chr9 114429095 + Exonic hg19 LUAD TCGA-49-AARE-01A 5 3 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 75452 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UGCG-UBXN11 UGCG chr9 114677026 - UBXN11 chr1 26633195 - Exonic hg19 BRCA TCGA-E2-A1LA-01A 7 11 CDS-5'UTR Inter-chr q31.3 p36.11 Seq+ 75453 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UGGT1-FAR1 UGGT1 chr2 128953247 - FAR1 chr11 13744912 + Exonic hg19 LUAD TCGA-50-6673-01A 2 1 Out-of-frame Inter-chr q14.3 p15.3 75454 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UGGT1-FOXP1 UGGT1 chr2 128939864 - FOXP1 chr3 71027180 - Exonic hg19 PRAD TCGA-VP-A87K-01A 2 2 Out-of-frame Inter-chr q14.3 p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 75455 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UGGT2-ANKRD16 UGGT2 chr13 96705409 - ANKRD16 chr10 5904654 - Exonic hg19 PRAD TCGA-EJ-5521-01A 12 2 CDS-3'UTR Inter-chr q32.1 p15.1 Seq+ 75456 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UGGT2-COL4A1 UGGT2 chr13 96665561 - COL4A1 chr13 110895081 - Exonic hg19 LUAD TCGA-69-7979-01A 3 2 In-Frame Intra-chr q32.1 q34 75457 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UGGT2-GPC5 UGGT2 chr13 96529533 - GPC5 chr13 93518535 + Exonic hg19 SARC TCGA-DX-AB2T-01A 4 1 Out-of-frame Intra-chr q32.1 q31.3 Tumor suppressor gene 75458 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UGGT2-TRPC4 UGGT2 chr13 96675294 - TRPC4 chr13 38357497 - Exonic hg19 PRAD TCGA-J9-A52D-01A 22 5 CDS-5'UTR Intra-chr q32.1 q13.3 Seq+ 75459 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UGP2-PLEKHM3 UGP2 chr2 64085070 - PLEKHM3 chr2 208795843 - Exonic hg19 LUSC TCGA-56-8083-01A 25 9 In-Frame Intra-chr p15 q33.3 Seq+ 75460 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UGT1A3-CCT5 UGT1A3 chr2 234681945 - CCT5 chr5 10250033 + Exonic hg19 KIRC TCGA-A3-3382-01A 2 3 Out-of-frame Inter-chr q37.1 p15.2 75461 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UGT1A3-FGG UGT1A3 chr2 234681945 - FGG chr4 155534001 - Exonic hg19 LIHC TCGA-DD-A4NP-01A 5 1 Out-of-frame Inter-chr q37.1 q32.1 75462 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UGT2B4-MTHFD2L UGT2B4 chr4 70355157 - MTHFD2L chr4 75025772 + Exonic hg19 LIHC TCGA-BC-A217-01A 204 96 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 75463 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UHMK1-PPOX UHMK1 chr1 162487980 - PPOX chr1 161139450 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 27 26 In-Frame Intra-chr q23.3 q23.3 Seq+ 75464 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UHRF1-AC011498.1 UHRF1 chr19 4932968 - AC011498.1 chr19 4488673 + Exonic hg19 UCEC TCGA-5B-A90C-01A 5 5 Out-of-frame Intra-chr p13.3 p13.3 75465 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UHRF1-ACTA2 UHRF1 chr19 4911050 - ACTA2 chr10 90707143 - Exonic hg19 BRCA TCGA-E2-A106-01A 71 39 In-Frame Inter-chr p13.3 q23.31 Seq+ 75466 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UHRF1BP1-EPYC UHRF1BP1 chr6 34791125 - EPYC chr12 91358103 - Exonic hg19 GBM TCGA-06-0129-01A 2 4 Out-of-frame Inter-chr p21.31 q21.33 Seq+ 75467 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UHRF1BP1-OSBPL1A UHRF1BP1 chr6 34760071 - OSBPL1A chr18 21957499 - Exonic hg19 LUSC TCGA-56-5898-01A 4 5 CDS-5'UTR Inter-chr p21.31 q11.2 Seq+ 75468 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UHRF1BP1-RIOK1 UHRF1BP1 chr6 34825694 - RIOK1 chr6 7417564 + Exonic hg19 PRAD TCGA-CH-5740-01A 30 24 In-Frame Intra-chr p21.31 p24.3 Atypical:RIO Seq+ 75469 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UHRF1BP1L-ANKS1B UHRF1BP1L chr12 100480053 - ANKS1B chr12 99548173 - Exonic hg19 LUSC TCGA-22-5473-01A 3 4 In-Frame Intra-chr q23.1 q23.1 Seq+ 75470 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UHRF1BP1L-CACNG3 UHRF1BP1L chr12 100536370 - CACNG3 chr16 24372673 + Exonic hg19 SARC TCGA-DX-A6BG-01A 17 9 Out-of-frame Inter-chr q23.1 p12.1 Seq+ 75471 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UHRF1BP1L-DENND1A UHRF1BP1L chr12 100441308 - DENND1A chr9 126554909 - Exonic hg19 BRCA TCGA-A2-A04T-01A 4 1 In-Frame Inter-chr q23.1 q33.3 75472 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UHRF1BP1L-DEPDC4 UHRF1BP1L chr12 100536370 - DEPDC4 chr12 100650004 - Exonic hg19 BRCA TCGA-D8-A1JK-01A 3 1 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 75473 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UHRF1BP1L-RP11-181C3.1 UHRF1BP1L chr12 100536370 - RP11-181C3.1 chr12 98887262 - Exonic hg19 SARC TCGA-K1-A42X-01A 4 6 Out-of-frame Intra-chr q23.1 75474 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UHRF1BP1L-TRHDE UHRF1BP1L chr12 100536370 - TRHDE chr12 72680461 + Exonic hg19 SARC TCGA-DX-AB2F-01A 38 36 In-Frame Intra-chr q23.1 q21.1 Seq+ 75475 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UHRF1BP1L-XRCC6BP1 UHRF1BP1L chr12 100536370 - XRCC6BP1 chr12 58345541 + Exonic hg19 SARC TCGA-DX-A6BG-01A 3 4 Out-of-frame Intra-chr q23.1 75476 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UHRF1BP1L-ZDHHC17 UHRF1BP1L chr12 100502164 - ZDHHC17 chr12 77191214 + Exonic hg19 SARC TCGA-DX-A3U5-01A 7 4 In-Frame Intra-chr q23.1 q21.2 Seq+ 75477 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UHRF2-OLFM1 UHRF2 chr9 6413643 - OLFM1 chr9 137987710 + Exonic hg19 LIHC TCGA-BC-A5W4-01A 5 2 In-Frame Intra-chr p24.1 Tumor suppressor gene q34.3 Seq+ 75478 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UIMC1-DBN1 UIMC1 chr5 176370336 - DBN1 chr5 176895900 - Exonic hg19 ACC TCGA-OR-A5J1-01A 11 2 Out-of-frame Intra-chr q35.2 Tumor suppressor gene q35.3 Seq+ 75479 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UIMC1-MXD3 UIMC1 chr5 176397743 - MXD3 chr5 176734965 - Exonic hg19 LIHC TCGA-BC-A112-01A 28 26 In-Frame Intra-chr q35.2 Tumor suppressor gene q35.3 Transcription factor Seq+ 75480 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UIMC1-MXD3 UIMC1 chr5 176409470 - MXD3 chr5 176738485 - Exonic hg19 PRAD TCGA-YJ-A8SW-01A 5 2 Out-of-frame Intra-chr q35.2 Tumor suppressor gene q35.3 Transcription factor Seq+ 75481 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UIMC1-PJA2 UIMC1 chr5 176409470 - PJA2 chr5 108719221 - Exonic hg19 ACC TCGA-OR-A5JS-01A 3 6 CDS-5'UTR Intra-chr q35.2 Tumor suppressor gene q21.3 Seq+ 75482 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UIMC1-PMM2 UIMC1 chr5 176370336 - PMM2 chr16 8941581 + Exonic hg19 BRCA TCGA-D8-A1XK-01A 12 3 Out-of-frame Inter-chr q35.2 Tumor suppressor gene p13.2 Seq+ 75483 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UIMC1-PTPRO UIMC1 chr5 176433540 - PTPRO chr12 15710389 + Exonic hg19 BRCA TCGA-EW-A6SB-01A 7 4 5'UTR-CDS Inter-chr q35.2 Tumor suppressor gene p12.3 Seq+ 75484 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ULK1-ETHE1 ULK1 chr12 132401607 - ETHE1 chr19 44011054 - Exonic hg19 BRCA TCGA-AC-A2BK-01A 2 1 In-Frame Inter-chr q24.33 Other:ULK q13.31 75485 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ULK1-FBXW8 ULK1 chr12 132403929 - FBXW8 chr12 117461952 + Exonic hg19 LUSC TCGA-34-5232-01A 24 15 In-Frame Intra-chr q24.33 Other:ULK q24.22 Seq+ 75486 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ULK1-PPP1R12C ULK1 chr12 132401607 - PPP1R12C chr19 55604601 - Exonic hg19 BRCA TCGA-AC-A2BK-01A 2 1 Out-of-frame Inter-chr q24.33 Other:ULK q13.42 75487 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ULK1-PRKAR1B ULK1 chr12 132401607 - PRKAR1B chr7 591107 - Exonic hg19 BRCA TCGA-AC-A2BK-01A 2 1 Out-of-frame Inter-chr q24.33 Other:ULK p22.3 75488 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ULK1-SFSWAP ULK1 chr12 132380369 - SFSWAP chr12 132281723 + Exonic hg19 STAD TCGA-BR-7704-01A 13 124 Out-of-frame Intra-chr q24.33 Other:ULK q24.33 Seq+ 75489 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ULK1-TCTN1 ULK1 chr12 132399966 - TCTN1 chr12 111066572 + Exonic hg19 SARC TCGA-3B-A9HO-01A 10 7 In-Frame Intra-chr q24.33 Other:ULK q24.11 Seq+ 75490 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ULK2-DOCK6 ULK2 chr17 19741814 - DOCK6 chr19 11364402 - Exonic hg19 BRCA TCGA-AN-A0XT-01A 12 18 Out-of-frame Inter-chr p11.2 Other:ULK p13.2 Seq+ 75491 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ULK2-MBD3 ULK2 chr17 19746434 - MBD3 chr19 1585213 - Exonic hg19 BRCA TCGA-AN-A0XT-01A 4 6 Out-of-frame Inter-chr p11.2 Other:ULK p13.3 Transcription factor Seq+ 75492 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ULK4-ANO10 ULK4 chr3 41925366 - ANO10 chr3 43408466 - Exonic hg19 LUAD TCGA-44-6778-01A 13 5 In-Frame Intra-chr p22.1 Other:ULK p21.33 Seq+ 75493 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ULK4-CCDC111 ULK4 chr3 41496988 - CCDC111 chr4 185606730 + Exonic hg19 LIHC TCGA-DD-A11C-01A 3 3 Out-of-frame Inter-chr p22.1 Other:ULK 75494 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ULK4-FBXO44 ULK4 chr3 41746549 - FBXO44 chr1 11715863 + Exonic hg19 UCEC TCGA-D1-A3JP-01A 3 1 CDS-5'UTR Inter-chr p22.1 Other:ULK p36.22 Seq+ 75495 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UMODL1-WRB UMODL1 chr21 43529809 - WRB chr21 40780532 + Exonic hg19 BRCA TCGA-AN-A0FJ-01A 2 1 Out-of-frame Intra-chr q22.3 q22.2 Seq+ 75496 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UMPS-ERC2 UMPS chr3 124457086 - ERC2 chr3 56053059 - Exonic hg19 LGG TCGA-S9-A7J0-01A 2 3 Out-of-frame Intra-chr q21.2 p14.3 Seq+ 75497 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UMPS-KALRN UMPS chr3 124449474 - KALRN chr3 124369655 + Exonic hg19 LGG TCGA-DU-7006-01A 4 2 In-Frame Intra-chr q21.2 q21.1 Seq+ 75498 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UMPS-KALRN UMPS chr3 124449474 - KALRN chr3 124281690 + Exonic hg19 LIHC TCGA-XR-A8TG-01A 14 5 In-Frame Intra-chr q21.2 q21.1 Seq+ 75499 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNC13B-DNER UNC13B chr9 35162302 - DNER chr2 230282946 - Exonic hg19 BRCA TCGA-AO-A03V-01A 28 15 In-Frame Inter-chr p13.3 q36.3 Seq+ 75500 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNC13B-FAM201A UNC13B chr9 35259047 - FAM201A chr9 38621829 + Exonic hg19 PAAD TCGA-2L-AAQE-01A 10 7 CDS-5'UTR Intra-chr p13.3 p13.1 Seq+ 75501 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNC13B-PTPRD UNC13B chr9 35386290 - PTPRD chr9 8636844 - Exonic hg19 BLCA TCGA-CF-A27C-01A 2 3 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene Seq+ 75502 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNC13B-SLMO1 UNC13B chr9 35259047 - SLMO1 chr18 12420324 + Exonic hg19 PAAD TCGA-HZ-A8P0-01A 2 1 Out-of-frame Inter-chr p13.3 75503 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNC13B-TAF7L UNC13B chr9 35162302 - TAF7L chrX 100524225 - Exonic hg19 LUAD TCGA-05-4382-01A 6 3 Out-of-frame Inter-chr p13.3 q22.1 Seq+ 75504 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNC13B-UBE2R2 UNC13B chr9 35231216 - UBE2R2 chr9 33886879 + Exonic hg19 HNSC TCGA-MT-A51X-01A 26 13 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 75505 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNC13D-FBF1 UNC13D chr17 73838514 - FBF1 chr17 73919719 - Exonic hg19 LUSC TCGA-94-8491-01A 33 17 In-Frame Intra-chr q25.1 q25.1 Seq+ 75506 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNC13D-FBF1 UNC13D chr17 73826109 - FBF1 chr17 73914350 - Exonic hg19 UCS TCGA-N5-A4RJ-01A 14 3 In-Frame Intra-chr q25.1 q25.1 Seq+ 75507 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNC45A-BLM UNC45A chr15 91483703 - BLM chr15 91358332 + Exonic hg19 LUAD TCGA-49-AAQV-01A 2 2 Out-of-frame Intra-chr q26.1 q26.1 Oncogene Tumor suppressor gene Seq+ 75508 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNC45A-IQGAP1 UNC45A chr15 91483703 - IQGAP1 chr15 91029262 + Exonic hg19 OV TCGA-24-2023-01A 6 10 In-Frame Intra-chr q26.1 q26.1 Seq+ 75509 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNC45A-MAN2A2 UNC45A chr15 91486312 - MAN2A2 chr15 91448481 + Exonic hg19 BLCA TCGA-ZF-A9RM-01A 5 2 Out-of-frame Intra-chr q26.1 q26.1 Seq+ 75510 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNC45A-RALGAPB UNC45A chr15 91493845 - RALGAPB chr20 37179714 + Exonic hg19 SKCM TCGA-WE-A8ZM-06A 6 8 Out-of-frame Inter-chr q26.1 q11.23 Seq+ 75511 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNC50-STARD7 UNC50 chr2 99227358 - STARD7 chr2 96859090 - Exonic hg19 LUAD TCGA-55-7907-01A 6 1 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 75512 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNC5A-TTC38 UNC5A chr5 176237821 - TTC38 chr22 46681138 + Exonic hg19 OV TCGA-36-1570-01A 5 2 Out-of-frame Inter-chr q35.2 Tumor suppressor gene q13.31 Seq+ 75513 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNC5B-ADAP2 UNC5B chr10 73047522 - ADAP2 chr17 29271925 + Exonic hg19 MESO TCGA-TS-A7OZ-01A 4 3 Out-of-frame Inter-chr q22.1 Tumor suppressor gene q11.2 Seq+ 75514 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNC5D-EIF4EBP1 UNC5D chr8 35093405 - EIF4EBP1 chr8 37914599 + Exonic hg19 PRAD TCGA-J9-A8CP-01A 2 2 In-Frame Intra-chr p12 Tumor suppressor gene p11.23 75515 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNG-AC023024.1 UNG chr12 109541416 - AC023024.1 chr15 101814886 - Exonic hg19 SARC TCGA-X6-A8C4-01A 2 2 Out-of-frame Inter-chr q24.11 q26.3 75516 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNK-AVIL UNK chr17 73781065 - AVIL chr12 58209842 - Exonic hg19 LUSC TCGA-43-2581-01A 19 8 Out-of-frame Inter-chr q25.1 q14.1 Seq+ 75517 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNK-B4GALNT2 UNK chr17 73781065 - B4GALNT2 chr17 47218609 + Exonic hg19 LUAD TCGA-50-6673-01A 100 63 In-Frame Intra-chr q25.1 q21.32 Seq+ 75518 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNK-C1QTNF1 UNK chr17 73781065 - C1QTNF1 chr17 77040037 + Exonic hg19 UCEC TCGA-EY-A3L3-01A 23 12 5'UTR-5'UTR Intra-chr q25.1 q25.3 Seq+ 75519 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNK-DPYD UNK chr17 73781065 - DPYD chr1 98039526 - Exonic hg19 LUSC TCGA-43-3920-01A 43 14 Out-of-frame Inter-chr q25.1 p21.3 Oncogene Seq+ 75520 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNK-ITGB4 UNK chr17 73781065 - ITGB4 chr17 73744922 + Exonic hg19 UCEC TCGA-BK-A139-02A 17 5 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 75521 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNK-ITGB4 UNK chr17 73781065 - ITGB4 chr17 73736439 + Exonic hg19 SARC TCGA-DX-A8BL-01A 7 3 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 75522 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNK-KIAA0195 UNK chr17 73781065 - KIAA0195 chr17 73467881 + Exonic hg19 LUAD TCGA-55-A48Y-01A 13 8 5'UTR-5'UTR Intra-chr q25.1 Seq+ 75523 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNK-KIAA0195 UNK chr17 73781065 - KIAA0195 chr17 73467881 + Exonic hg19 ESCA TCGA-L5-A8NI-01A 3 3 5'UTR-5'UTR Intra-chr q25.1 Seq+ 75524 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNK-NAF1 UNK chr17 73781065 - NAF1 chr4 164085543 - Exonic hg19 LUAD TCGA-86-7955-01A 19 4 In-Frame Inter-chr q25.1 q32.2 Seq+ 75525 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNK-PRKCA UNK chr17 73781065 - PRKCA chr17 64492319 + Exonic hg19 KIRC TCGA-BP-4983-01A 15 1 Out-of-frame Intra-chr q25.1 q24.2 75526 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNK-RNF157 UNK chr17 73781065 - RNF157 chr17 74169871 - Exonic hg19 UCEC TCGA-KP-A3VZ-01A 4 7 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 75527 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNK-SPOP UNK chr17 73781065 - SPOP chr17 47700238 - Exonic hg19 SARC TCGA-3B-A9HS-01A 13 5 5'UTR-5'UTR Intra-chr q25.1 q21.33 Oncogene Tumor suppressor gene Seq+ 75528 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNK-ZNF266 UNK chr17 73781065 - ZNF266 chr19 9530894 - Exonic hg19 LUAD TCGA-50-5946-01A 22 8 5'UTR-5'UTR Inter-chr q25.1 p13.2 Transcription factor Seq+ 75529 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNK-ZNF266 UNK chr17 73781065 - ZNF266 chr19 9530894 - Exonic hg19 LUAD TCGA-50-5946-02A 2 3 5'UTR-5'UTR Inter-chr q25.1 p13.2 Transcription factor Seq+ 75530 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UNKL-DIP2B UNKL chr16 1463847 - DIP2B chr12 51019759 + Exonic hg19 LIHC TCGA-ED-A82E-01A 3 2 Out-of-frame Inter-chr p13.3 q13.12 Seq+ 75531 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UPF1-CRTC1 UPF1 chr19 18963880 - CRTC1 chr19 18864310 + Exonic hg19 BLCA TCGA-DK-AA6W-01A 32 30 In-Frame Intra-chr p13.11 p13.11 Oncogene Seq+ 75532 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UPF1-EIF3M UPF1 chr19 18979038 - EIF3M chr11 32611132 + Exonic hg19 PRAD TCGA-EJ-5494-01A 2 2 Out-of-frame Inter-chr p13.11 p13 75533 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UPF3A-CDC16 UPF3A chr13 115052104 - CDC16 chr13 115027362 + Exonic hg19 LIHC TCGA-DD-AADJ-01A 3 12 Out-of-frame Intra-chr q34 q34 Seq+ 75534 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UPF3A-CDC16 UPF3A chr13 115052104 - CDC16 chr13 115027362 + Exonic hg19 LIHC TCGA-DD-AAVW-01A 3 10 Out-of-frame Intra-chr q34 q34 Seq+ 75535 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UPF3A-CDC16 UPF3A chr13 115052104 - CDC16 chr13 115028354 + Exonic hg19 THCA TCGA-DJ-A2QA-01A 3 18 Out-of-frame Intra-chr q34 q34 Seq+ 75536 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UPF3A-CDC16 UPF3A chr13 115048418 - CDC16 chr13 115007596 + Exonic hg19 UCEC TCGA-KP-A3W4-01A 3 21 Out-of-frame Intra-chr q34 q34 Seq+ 75537 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UPK2-SUPT16H UPK2 chr11 118829269 - SUPT16H chr14 21829491 - Exonic hg19 BLCA TCGA-GV-A3QH-01A 2 9 Out-of-frame Inter-chr q23.3 q11.2 75538 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UPP1-NCALD UPP1 chr7 48148012 - NCALD chr8 102813898 - Exonic hg19 SKCM TCGA-ER-A19C-06A 2 2 Out-of-frame Inter-chr p12.3 q22.3 75539 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UQCC-ADAMTS12 UQCC chr20 33934967 - ADAMTS12 chr5 33624456 - Exonic hg19 LUAD TCGA-50-5944-01A 2 1 In-Frame Inter-chr p13.2 75540 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UQCC-CACNA2D4 UQCC chr20 33954360 - CACNA2D4 chr12 1919753 - Exonic hg19 BRCA TCGA-AO-A03L-01A 8 4 Out-of-frame Inter-chr p13.33 Seq+ 75541 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UQCC-GDF5 UQCC chr20 33999743 - GDF5 chr20 34022581 - Exonic hg19 LUSC TCGA-46-6025-01A 5 10 Out-of-frame Intra-chr q11.22 75542 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UQCC-KIAA1755 UQCC chr20 33954360 - KIAA1755 chr20 36856642 - Exonic hg19 BRCA TCGA-A2-A04U-01A 4 3 In-Frame Intra-chr q11.23 Seq+ 75543 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UQCC-LRBA UQCC chr20 33954360 - LRBA chr4 151604869 - Exonic hg19 BRCA TCGA-E2-A1LH-01A 2 1 Out-of-frame Inter-chr q31.3 75544 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UQCC-MRPS35 UQCC chr20 33902491 - MRPS35 chr12 27888380 + Exonic hg19 PRAD TCGA-G9-6377-01A 6 2 In-Frame Inter-chr p11.22 75545 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UQCC-RBM39 UQCC chr20 33961987 - RBM39 chr20 34326939 - Exonic hg19 SKCM TCGA-LH-A9QB-06A 3 6 Out-of-frame Intra-chr q11.22 75546 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UQCC-SAMHD1 UQCC chr20 33981895 - SAMHD1 chr20 35575207 - Exonic hg19 BRCA TCGA-BH-A0H9-01A 5 11 Out-of-frame Intra-chr q11.23 Seq+ 75547 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UQCC-SHISA4 UQCC chr20 33999743 - SHISA4 chr1 201858573 + Exonic hg19 UCS TCGA-N5-A4RA-01A 2 6 Out-of-frame Inter-chr q32.1 75548 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UQCRC1-FNIP2 UQCRC1 chr3 48636436 - FNIP2 chr4 159750231 + Exonic hg19 PRAD TCGA-HC-7744-01A 2 1 3'UTR-CDS Inter-chr p21.31 q32.1 75549 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UQCRC1-PRKAR2A UQCRC1 chr3 48637496 - PRKAR2A chr3 48785373 - Exonic hg19 BLCA TCGA-XF-A9ST-01A 60 30 CDS-3'UTR Intra-chr p21.31 p21.31 Seq+ 75550 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UQCRC1-SMARCC1 UQCRC1 chr3 48646595 - SMARCC1 chr3 47632327 - Exonic hg19 LUAD TCGA-44-8117-01A 29 11 Out-of-frame Intra-chr p21.31 p21.31 Tumor suppressor gene Seq+ 75551 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UQCRC2-CYB5RL UQCRC2 chr16 21968887 - CYB5RL chr1 54645025 - Exonic hg19 BLCA TCGA-R3-A69X-01A 14 14 In-Frame Inter-chr p32.3 Seq+ 75552 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq URGCP-CCDC129 URGCP chr7 43927014 - CCDC129 chr7 31681790 + Exonic hg19 BRCA TCGA-A2-A0D4-01A 2 1 In-Frame Intra-chr p13 p14.3 Seq+ 75553 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq URGCP-CCDC129 URGCP chr7 43927014 - CCDC129 chr7 31681790 + Exonic hg19 BRCA TCGA-AN-A0FV-01A 124 95 In-Frame Intra-chr p13 p14.3 Seq+ 75554 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq URGCP-UPP1 URGCP chr7 43965731 - UPP1 chr7 48134360 + Exonic hg19 LUSC TCGA-O2-A52N-01A 8 4 5'UTR-5'UTR Intra-chr p13 p12.3 Seq+ 75555 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq URM1-C9orf3 URM1 chr9 131133694 - C9orf3 chr9 97822976 + Exonic hg19 LUSC TCGA-LA-A7SW-01A 15 15 Out-of-frame Intra-chr q34.11 q22.32 Seq+ 75556 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq URM1-TP53BP1 URM1 chr9 131140385 - TP53BP1 chr15 43762264 - Exonic hg19 STAD TCGA-BR-8060-01A 11 7 In-Frame Inter-chr q34.11 q15.3 Tumor suppressor gene Seq+ 75557 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USF1-UCK2 USF1 chr1 161015648 - UCK2 chr1 165865427 + Exonic hg19 PRAD TCGA-EJ-5518-01A 51 57 5'UTR-CDS Intra-chr q23.3 Transcription factor q24.1 Seq+ 75558 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USF2-CLASRP USF2 chr19 35762044 - CLASRP chr19 45556356 + Exonic hg19 LUAD TCGA-49-AAQV-01A 27 21 Out-of-frame Intra-chr q13.12 Transcription factor q13.32 Seq+ 75559 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USF2-ZNF30 USF2 chr19 35760602 - ZNF30 chr19 35433498 + Exonic hg19 ESCA TCGA-L5-A8NI-01A 3 37 CDS-5'UTR Intra-chr q13.12 Transcription factor q13.11 Transcription factor Seq+ 75560 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP1-EFCAB7 USP1 chr1 62903071 - EFCAB7 chr1 64027380 + Exonic hg19 PRAD TCGA-J9-A8CK-01A 19 17 5'UTR-CDS Intra-chr p31.3 p31.3 Seq+ 75561 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP1-SGIP1 USP1 chr1 62914337 - SGIP1 chr1 67091530 + Exonic hg19 BRCA TCGA-AR-A24S-01A 14 9 Out-of-frame Intra-chr p31.3 p31.3 Seq+ 75562 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP10-ATP2C2 USP10 chr16 84773975 - ATP2C2 chr16 84442011 + Exonic hg19 SKCM TCGA-D3-A1Q1-06A 7 30 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 75563 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP10-CDH13 USP10 chr16 84767109 - CDH13 chr16 83781713 + Exonic hg19 LUSC TCGA-43-A56U-01A 24 28 Out-of-frame Intra-chr q24.1 q23.3 Tumor suppressor gene Seq+ 75564 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP10-CDH13 USP10 chr16 84733717 - CDH13 chr16 83781713 + Exonic hg19 STAD TCGA-CG-4449-01A 13 2 Out-of-frame Intra-chr q24.1 q23.3 Tumor suppressor gene Seq+ 75565 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP10-KIFC3 USP10 chr16 84767109 - KIFC3 chr16 57800897 - Exonic hg19 BRCA TCGA-PL-A8LZ-01A 28 42 In-Frame Intra-chr q24.1 q21 Seq+ 75566 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP12-E2F3 USP12 chr13 27664020 - E2F3 chr6 20480077 + Exonic hg19 BLCA TCGA-GC-A3RB-01A 4 2 Out-of-frame Inter-chr q12.13 Tumor suppressor gene p22.3 Tumor suppressor gene Transcription factor Seq+ 75567 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP12-LNX2 USP12 chr13 27669738 - LNX2 chr13 28134122 - Exonic hg19 STAD TCGA-BR-4357-01A 102 68 In-Frame Intra-chr q12.13 Tumor suppressor gene q12.2 Seq+ 75568 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP12-NXF3 USP12 chr13 27664020 - NXF3 chrX 102339423 - Exonic hg19 SARC TCGA-DX-A3LY-01B 4 5 In-Frame Inter-chr q12.13 Tumor suppressor gene q22.1 Seq+ 75569 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP13-KCNMB2 USP13 chr3 179460138 - KCNMB2 chr3 178560441 + Exonic hg19 SKCM TCGA-D3-A51G-06A 802 401 Out-of-frame Intra-chr q26.33 q26.32 Seq+ 75570 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP13-PIK3CA USP13 chr3 179418917 - PIK3CA chr3 178941869 + Exonic hg19 BRCA TCGA-E2-A14P-01A 6 3 In-Frame Intra-chr q26.33 q26.32 Oncogene Seq+ 75571 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP13-RP5-862P8.2 USP13 chr3 179371181 - RP5-862P8.2 chr1 233518051 + Exonic hg19 BRCA TCGA-AR-A0TS-01A 6 7 Out-of-frame Inter-chr q26.33 75572 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP14-NOL4 USP14 chr18 180339 - NOL4 chr18 31463388 - Exonic hg19 SARC TCGA-DX-A48L-01A 10 2 Out-of-frame Intra-chr p11.32 q12.1 Seq+ 75573 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP14-THOC1 USP14 chr18 180339 - THOC1 chr18 216633 - Exonic hg19 HNSC TCGA-IQ-A61G-01A 66 23 In-Frame Intra-chr p11.32 p11.32 Seq+ 75574 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP15-CPSF6 USP15 chr12 62654284 - CPSF6 chr12 69644909 + Exonic hg19 LGG TCGA-FG-A70Z-01A 5 1 Out-of-frame Intra-chr q14.1 q15 Seq+ 75575 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP15-DPY19L2 USP15 chr12 62719714 - DPY19L2 chr12 63977616 - Exonic hg19 SARC TCGA-HB-A3YV-01A 8 15 In-Frame Intra-chr q14.1 q14.2 Seq+ 75576 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP15-PCBP2 USP15 chr12 62654284 - PCBP2 chr12 53848510 + Exonic hg19 GBM TCGA-41-2571-01A 6 34 CDS-5'UTR Intra-chr q14.1 q13.13 Seq+ 75577 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP15-PKP4 USP15 chr12 62783768 - PKP4 chr2 159497139 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 5 2 In-Frame Inter-chr q14.1 q24.1 Seq+ 75578 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP15-PRRC2C USP15 chr12 62654284 - PRRC2C chr1 171501482 + Exonic hg19 SARC TCGA-DX-A1L0-01A 7 2 Out-of-frame Inter-chr q14.1 q24.3 75579 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP15-SRGAP1 USP15 chr12 62719714 - SRGAP1 chr12 64377727 + Exonic hg19 SARC TCGA-DX-A23R-01A 3 1 Out-of-frame Intra-chr q14.1 q14.2 75580 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP15-SYT1 USP15 chr12 62654284 - SYT1 chr12 79679567 + Exonic hg19 LUAD TCGA-MP-A4SV-01A 3 1 Out-of-frame Intra-chr q14.1 q21.2 75581 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP16-ACSS3 USP16 chr21 30397098 - ACSS3 chr12 81545623 + Exonic hg19 SARC TCGA-3B-A9HS-01A 40 16 5'UTR-CDS Inter-chr q21.3 q21.31 Seq+ 75582 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP16-C20orf152 USP16 chr21 30403094 - C20orf152 chr20 34560551 + Exonic hg19 HNSC TCGA-D6-6825-01A 19 8 In-Frame Inter-chr q21.3 75583 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP18-YWHAH USP18 chr22 18632989 - YWHAH chr22 32352126 + Exonic hg19 SKCM TCGA-D3-A5GN-06A 4 7 5'UTR-CDS Intra-chr q11.21 q12.3 Seq+ 75584 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP21-PVRL4 USP21 chr1 161134040 - PVRL4 chr1 161042675 - Exonic hg19 BRCA TCGA-A2-A25B-01A 4 1 In-Frame Intra-chr q23.3 75585 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP22-ATP2A3 USP22 chr17 20945978 - ATP2A3 chr17 3848442 - Exonic hg19 PRAD TCGA-HC-A6AN-01A 2 2 In-Frame Intra-chr p11.2 p13.2 Seq+ 75586 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP22-MYH10 USP22 chr17 20919065 - MYH10 chr17 8508300 - Exonic hg19 BRCA TCGA-A8-A06O-01A 4 7 Out-of-frame Intra-chr p11.2 p13.1 Seq+ 75587 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP22-MYH10 USP22 chr17 20919065 - MYH10 chr17 8508300 - Exonic hg19 BRCA TCGA-A8-A076-01A 3 7 Out-of-frame Intra-chr p11.2 p13.1 Seq+ 75588 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP22-MYH10 USP22 chr17 20919065 - MYH10 chr17 8508300 - Exonic hg19 BRCA TCGA-A8-A07P-01A 9 12 Out-of-frame Intra-chr p11.2 p13.1 Seq+ 75589 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP22-MYH10 USP22 chr17 20919065 - MYH10 chr17 8508300 - Exonic hg19 BRCA TCGA-A8-A086-01A 9 9 Out-of-frame Intra-chr p11.2 p13.1 Seq+ 75590 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP22-MYH10 USP22 chr17 20919065 - MYH10 chr17 8508300 - Exonic hg19 BRCA TCGA-A8-A08J-01A 9 8 Out-of-frame Intra-chr p11.2 p13.1 Seq+ 75591 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP22-MYH10 USP22 chr17 20919065 - MYH10 chr17 8508300 - Exonic hg19 BRCA TCGA-A8-A092-01A 10 8 Out-of-frame Intra-chr p11.2 p13.1 Seq+ 75592 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP22-MYH10 USP22 chr17 20919065 - MYH10 chr17 8508300 - Exonic hg19 BRCA TCGA-A8-A093-01A 77 88 Out-of-frame Intra-chr p11.2 p13.1 Seq+ 75593 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP22-MYH10 USP22 chr17 20919065 - MYH10 chr17 8508300 - Exonic hg19 BRCA TCGA-A8-A09C-01A 3 4 Out-of-frame Intra-chr p11.2 p13.1 Seq+ 75594 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP22-MYH10 USP22 chr17 20919065 - MYH10 chr17 8508300 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 5 7 Out-of-frame Intra-chr p11.2 p13.1 Seq+ 75595 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP22-MYO19 USP22 chr17 20945978 - MYO19 chr17 34852250 - Exonic hg19 BRCA TCGA-BH-A0DD-01A 27 15 In-Frame Intra-chr p11.2 q12 Seq+ 75596 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP22-RNF167 USP22 chr17 20945978 - RNF167 chr17 4847853 + Exonic hg19 PRAD TCGA-V1-A8ML-01A 4 4 Out-of-frame Intra-chr p11.2 p13.2 Seq+ 75597 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP22-SLC39A11 USP22 chr17 20945978 - SLC39A11 chr17 70732858 - Exonic hg19 BRCA TCGA-D8-A27N-01A 18 53 Out-of-frame Intra-chr p11.2 q25.1 Seq+ 75598 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP22-SPACA3 USP22 chr17 20945978 - SPACA3 chr17 31323861 + Exonic hg19 BRCA TCGA-A8-A06Z-01A 3 5 Out-of-frame Intra-chr p11.2 q11.2 Seq+ 75599 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP25-CAPN3 USP25 chr21 17203948 - CAPN3 chr15 42676681 + Exonic hg19 LUSC TCGA-77-A5G3-01A 3 3 Out-of-frame Inter-chr q21.1 q15.1 Seq+ 75600 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP25-CYYR1 USP25 chr21 17191165 - CYYR1 chr21 27840953 - Exonic hg19 CESC TCGA-DS-A0VL-01A 7 7 Out-of-frame Intra-chr q21.1 q21.3 Seq+ 75601 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP25-DZIP3 USP25 chr21 17163983 - DZIP3 chr3 108392925 + Exonic hg19 UCEC TCGA-FI-A3PX-01A 35 14 In-Frame Inter-chr q21.1 q13.13 Seq+ 75602 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP25-PCNT USP25 chr21 17183529 - PCNT chr21 47841884 + Exonic hg19 HNSC TCGA-CN-4739-01A 3 1 In-Frame Intra-chr q21.1 q22.3 Seq+ 75603 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP3-HERC1 USP3 chr15 63797029 - HERC1 chr15 63955403 - Exonic hg19 LUSC TCGA-77-8139-01A 9 1 In-Frame Intra-chr q22.31 q22.31 Seq+ 75604 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP3-TLN2 USP3 chr15 63829355 - TLN2 chr15 63111715 + Exonic hg19 UCS TCGA-N5-A4RA-01A 4 1 Out-of-frame Intra-chr q22.31 q22.2 75605 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP30-STAB2 USP30 chr12 109509515 - STAB2 chr12 104134408 + Exonic hg19 SARC TCGA-DX-A1L4-01A 3 1 In-Frame Intra-chr q24.11 q23.3 75606 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP31-ELAVL2 USP31 chr16 23159959 - ELAVL2 chr9 23762247 - Exonic hg19 BLCA TCGA-GC-A4ZW-01A 3 1 CDS-5'UTR Inter-chr p12.2 p21.3 75607 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP31-ERI2 USP31 chr16 23113640 - ERI2 chr16 20811724 - Exonic hg19 PRAD TCGA-HI-7168-01A 2 9 In-Frame Intra-chr p12.2 p12.3 75608 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP31-MKL2 USP31 chr16 23159959 - MKL2 chr16 14351958 + Exonic hg19 BRCA TCGA-A2-A0CU-01A 2 1 In-Frame Intra-chr p12.2 p13.12 75609 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP31-PRKCB USP31 chr16 23159959 - PRKCB chr16 23999829 + Exonic hg19 BLCA TCGA-4Z-AA7M-01A 8 11 Out-of-frame Intra-chr p12.2 p12.2 Tumor suppressor gene Seq+ 75610 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP31-RHD USP31 chr16 23113640 - RHD chr1 25611064 + Exonic hg19 BLCA TCGA-ZF-A9RL-01A 25 4 In-Frame Inter-chr p12.2 p36.11 Seq+ 75611 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP31-SNRNP25 USP31 chr16 23159959 - SNRNP25 chr16 105459 + Exonic hg19 HNSC TCGA-P3-A5QA-01A 2 1 In-Frame Intra-chr p12.2 p13.3 75612 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP32-APPBP2 USP32 chr17 58372044 - APPBP2 chr17 58577848 - Exonic hg19 LUAD TCGA-75-5126-01A 11 9 In-Frame Intra-chr q23.2 q23.2 Seq+ 75613 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP32-EPHA1 USP32 chr17 58469243 - EPHA1 chr7 143094750 - Exonic hg19 LUSC TCGA-22-5481-01A 7 5 In-Frame Inter-chr q23.2 q35 Tumor suppressor gene Seq+ 75614 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP32-EXOSC5 USP32 chr17 58329742 - EXOSC5 chr19 41898885 - Exonic hg19 KIRP TCGA-IA-A40Y-01A 2 1 Out-of-frame Inter-chr q23.2 q13.2 75615 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP32-SPANXN4 USP32 chr17 58422842 - SPANXN4 chrX 142121811 + Exonic hg19 LGG TCGA-S9-A6WG-01A 9 4 In-Frame Inter-chr q23.2 q27.3 Seq+ 75616 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP33-CCDC53 USP33 chr1 78177432 - CCDC53 chr12 102406970 - Exonic hg19 SKCM TCGA-ER-A2ND-06A 116 100 Out-of-frame Inter-chr p31.1 Tumor suppressor gene Seq+ 75617 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP33-CDK12 USP33 chr1 78225328 - CDK12 chr17 37627132 + Exonic hg19 PCPG TCGA-SR-A6MP-01A 5 2 5'UTR-CDS Inter-chr p31.1 Tumor suppressor gene q12 Oncogene Seq+ 75618 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP34-C2orf74 USP34 chr2 61417406 - C2orf74 chr2 61391489 + Exonic hg19 LIHC TCGA-ZS-A9CF-01A 2 3 In-Frame Intra-chr p15 p15 Seq+ 75619 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP34-C2orf74 USP34 chr2 61417406 - C2orf74 chr2 61391489 + Exonic hg19 LIHC TCGA-ZS-A9CF-02A 4 1 In-Frame Intra-chr p15 p15 Seq+ 75620 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP34-CARKD USP34 chr2 61468695 - CARKD chr13 111286892 + Exonic hg19 BRCA TCGA-BH-A0BL-01A 2 1 In-Frame Inter-chr p15 75621 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP34-CCDC117 USP34 chr2 61697785 - CCDC117 chr22 29169713 + Exonic hg19 UCEC TCGA-EO-A3AS-01A 4 2 Out-of-frame Inter-chr p15 q12.1 Seq+ 75622 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP34-CCT4 USP34 chr2 61697785 - CCT4 chr2 62112207 - Exonic hg19 STAD TCGA-BR-8060-01A 4 20 In-Frame Intra-chr p15 p15 75623 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP34-FAM161A USP34 chr2 61486846 - FAM161A chr2 62054393 - Exonic hg19 BLCA TCGA-BL-A13J-01A 32 12 In-Frame Intra-chr p15 p15 Seq+ 75624 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP34-KDM4B USP34 chr2 61697785 - KDM4B chr19 5119129 + Exonic hg19 UCEC TCGA-AJ-A6NU-01A 26 22 Out-of-frame Inter-chr p15 p13.3 Seq+ 75625 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP34-KIAA1841 USP34 chr2 61546308 - KIAA1841 chr2 61295984 + Exonic hg19 DLBC TCGA-FF-8043-01A 2 1 CDS-5'UTR Intra-chr p15 p15 75626 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP34-WDR92 USP34 chr2 61697785 - WDR92 chr2 68374699 - Exonic hg19 BRCA TCGA-E2-A1II-01A 16 14 Out-of-frame Intra-chr p15 p14 Seq+ 75627 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP34-ZNF2 USP34 chr2 61449754 - ZNF2 chr2 95841933 + Exonic hg19 LUSC TCGA-56-8083-01A 45 15 CDS-5'UTR Intra-chr p15 q11.1 Transcription factor Seq+ 75628 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP34-ZNF638 USP34 chr2 61647881 - ZNF638 chr2 71582849 + Exonic hg19 BRCA TCGA-D8-A1JT-01A 2 1 Out-of-frame Intra-chr p15 p13.3 75629 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP35-CHRDL2 USP35 chr11 77911854 - CHRDL2 chr11 74429877 - Exonic hg19 SKCM TCGA-YG-AA3P-06A 13 5 Out-of-frame Intra-chr q14.1 q13.4 Seq+ 75630 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP35-RNF169 USP35 chr11 77900203 - RNF169 chr11 74500671 + Exonic hg19 BRCA TCGA-A7-A4SB-01A 4 1 5'UTR-CDS Intra-chr q14.1 q13.4 75631 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP35-TSHZ2 USP35 chr11 77900203 - TSHZ2 chr20 52103683 + Exonic hg19 BRCA TCGA-D8-A1X5-01A 14 7 5'UTR-3'UTR Inter-chr q14.1 q13.2 Transcription factor Seq+ 75632 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP36-OFCC1 USP36 chr17 76808942 - OFCC1 chr6 9705675 - Exonic hg19 BRCA TCGA-A2-A25B-01A 11 6 Out-of-frame Inter-chr q25.3 p24.3 Seq+ 75633 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP37-NHEJ1 USP37 chr2 219427396 - NHEJ1 chr2 219942928 - Exonic hg19 UCS TCGA-NA-A5I1-01A 41 22 5'UTR-CDS Intra-chr q35 q35 Seq+ 75634 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP37-RNF25 USP37 chr2 219394679 - RNF25 chr2 219533402 - Exonic hg19 BRCA TCGA-AO-A128-01A 6 2 In-Frame Intra-chr q35 q35 Seq+ 75635 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP37-SAMD12 USP37 chr2 219410944 - SAMD12 chr8 119209971 - Exonic hg19 BRCA TCGA-EW-A1PF-01A 5 1 Out-of-frame Inter-chr q35 q24.12 Seq+ 75636 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP38-IL17F USP38 chr4 144119077 - IL17F chr6 52101966 - Exonic hg19 BLCA TCGA-GV-A3QH-01A 12 16 Out-of-frame Inter-chr q31.21 p12.2 Seq+ 75637 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP38-RIT2 USP38 chr4 144109114 - RIT2 chr18 40323685 - Exonic hg19 SARC TCGA-DX-A6YR-01A 51 33 Out-of-frame Inter-chr q31.21 q12.3 Seq+ 75638 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP38-TMEM154 USP38 chr4 144109114 - TMEM154 chr4 153549713 - Exonic hg19 UCS TCGA-N5-A59E-01A 3 2 In-Frame Intra-chr q31.21 q31.3 Seq+ 75639 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP39-CD8B USP39 chr2 85848702 - CD8B chr2 87049497 - Exonic hg19 HNSC TCGA-CV-7421-01A 5 4 Out-of-frame Intra-chr p11.2 p11.2 75640 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP39-DNAH6 USP39 chr2 85858069 - DNAH6 chr2 84945328 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 3 8 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 75641 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP39-ELMOD3 USP39 chr2 85848702 - ELMOD3 chr2 85604467 + Exonic hg19 BRCA TCGA-E2-A1LE-01A 14 8 In-Frame Intra-chr p11.2 p11.2 Seq+ 75642 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP39-GGCX USP39 chr2 85868241 - GGCX chr2 85786198 - Exonic hg19 LUSC TCGA-77-A5GH-01A 2 2 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 75643 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP39-REEP1 USP39 chr2 85846412 - REEP1 chr2 86509365 - Exonic hg19 SKCM TCGA-EE-A2GP-06A 2 4 In-Frame Intra-chr p11.2 p11.2 Seq+ 75644 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP39-VAMP8 USP39 chr2 85852814 - VAMP8 chr2 85808699 + Exonic hg19 LIHC TCGA-RC-A6M4-01A 78 75 In-Frame Intra-chr p11.2 p11.2 Seq+ 75645 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP4-BBOX1 USP4 chr3 49329943 - BBOX1 chr11 27078748 + Exonic hg19 LGG TCGA-HT-A619-01A 17 5 Out-of-frame Inter-chr p21.31 p14.2 Seq+ 75646 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP4-CCDC13 USP4 chr3 49348053 - CCDC13 chr3 42799843 - Exonic hg19 BLCA TCGA-ZF-AA4N-01A 4 6 CDS-5'UTR Intra-chr p21.31 p22.1 Seq+ 75647 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP4-RHOA USP4 chr3 49377357 - RHOA chr3 49405981 - Exonic hg19 BLCA TCGA-E7-A7PW-01A 12 14 Out-of-frame Intra-chr p21.31 p21.31 Oncogene Tumor suppressor gene Seq+ 75648 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP4-SCRIB USP4 chr3 49362135 - SCRIB chr8 144877700 - Exonic hg19 COAD TCGA-D5-6534-01A 5 2 Out-of-frame Inter-chr p21.31 Tumor suppressor gene Seq+ 75649 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP42-GLCCI1 USP42 chr7 6190137 - GLCCI1 chr7 8043538 + Exonic hg19 BRCA TCGA-A2-A0D1-01A 3 1 Out-of-frame Intra-chr p22.1 p21.3 Seq+ 75650 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP42-SLC46A2 USP42 chr7 6155154 - SLC46A2 chr9 115649693 - Exonic hg19 BRCA TCGA-BH-A1FN-01A 6 2 In-Frame Inter-chr p22.1 q32 Seq+ 75651 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP43-C1orf168 USP43 chr17 9586275 - C1orf168 chr1 57186002 - Exonic hg19 STAD TCGA-D7-8578-01A 2 2 Out-of-frame Inter-chr p13.1 p32.2 75652 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP43-ENDOV USP43 chr17 9605017 - ENDOV chr17 78398832 + Exonic hg19 BRCA TCGA-E2-A109-01A 11 11 Out-of-frame Intra-chr p13.1 q25.3 Seq+ 75653 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP43-TMEM116 USP43 chr17 9559851 - TMEM116 chr12 112371834 - Exonic hg19 PRAD TCGA-2A-A8W3-01A 6 7 In-Frame Inter-chr p13.1 q24.13 Seq+ 75654 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP45-ASCC3 USP45 chr6 99912480 - ASCC3 chr6 100988263 - Exonic hg19 LIHC TCGA-ZP-A9D0-01A 20 8 In-Frame Intra-chr q16.2 q16.3 Seq+ 75655 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP45-RIOK1 USP45 chr6 99956486 - RIOK1 chr6 7417564 + Exonic hg19 PRAD TCGA-G9-6351-01A 31 28 In-Frame Intra-chr q16.2 p24.3 Atypical:RIO Seq+ 75656 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP46-PDGFRA USP46 chr4 53525282 - PDGFRA chr4 55140698 + Exonic hg19 LGG TCGA-CS-6665-01A 436 231 Out-of-frame Intra-chr q12 q12 Oncogene Seq+ 75657 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP47-GALNTL4 USP47 chr11 11863771 - GALNTL4 chr11 11314740 - Exonic hg19 SARC TCGA-DX-AB2Z-01A 33 32 In-Frame Intra-chr p15.3 75658 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP47-RRAS2 USP47 chr11 11863771 - RRAS2 chr11 14317401 - Exonic hg19 SKCM TCGA-EB-A82C-01A 5 6 In-Frame Intra-chr p15.3 p15.2 Seq+ 75659 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP48-C1orf201 USP48 chr1 22079485 - C1orf201 chr1 24727946 - Exonic hg19 LUSC TCGA-77-6845-01A 5 4 CDS-5'UTR Intra-chr p36.12 75660 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP48-HSPG2 USP48 chr1 22109317 - HSPG2 chr1 22160107 - Exonic hg19 UCEC TCGA-EO-A3KW-01A 5 3 Out-of-frame Intra-chr p36.12 p36.12 Seq+ 75661 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP48-INA USP48 chr1 22109317 - INA chr10 105046792 + Exonic hg19 UCEC TCGA-AJ-A3BF-01A 136 61 Out-of-frame Inter-chr p36.12 q24.33 Seq+ 75662 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP48-KALRN USP48 chr1 22027991 - KALRN chr3 124281690 + Exonic hg19 SARC TCGA-WP-A9GB-01A 9 14 In-Frame Inter-chr p36.12 q21.1 Seq+ 75663 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP48-MAN1C1 USP48 chr1 22109317 - MAN1C1 chr1 26110154 + Exonic hg19 LUSC TCGA-85-8070-01A 736 258 In-Frame Intra-chr p36.12 p36.11 Seq+ 75664 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP48-PSMA8 USP48 chr1 22078000 - PSMA8 chr18 23724523 + Exonic hg19 PRAD TCGA-G9-6361-01A 10 10 In-Frame Inter-chr p36.12 q11.2 Seq+ 75665 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP48-SEPN1 USP48 chr1 22109317 - SEPN1 chr1 26131633 + Exonic hg19 LUSC TCGA-85-8070-01A 56 7 Out-of-frame Intra-chr p36.12 Seq+ 75666 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP49-APOBEC2 USP49 chr6 41766613 - APOBEC2 chr6 41029067 + Exonic hg19 SARC TCGA-DX-A3LU-01A 4 1 Out-of-frame Intra-chr p21.1 p21.1 75667 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP49-DAAM2 USP49 chr6 41859532 - DAAM2 chr6 39828704 + Exonic hg19 GBM TCGA-06-0129-01A 2 1 5'UTR-CDS Intra-chr p21.1 p21.2 Seq+ 75668 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP49-KCTD20 USP49 chr6 41839302 - KCTD20 chr6 36437829 + Exonic hg19 GBM TCGA-06-0129-01A 6 13 5'UTR-5'UTR Intra-chr p21.1 p21.31 Seq+ 75669 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP49-MED20 USP49 chr6 41859532 - MED20 chr6 41875025 - Exonic hg19 BRCA TCGA-B6-A0X1-01A 6 2 5'UTR-CDS Intra-chr p21.1 p21.1 75670 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP49-STRN USP49 chr6 41839302 - STRN chr2 37113969 - Exonic hg19 BRCA TCGA-D8-A1JL-01A 3 2 5'UTR-CDS Inter-chr p21.1 p22.2 75671 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP49-TAF8 USP49 chr6 41839302 - TAF8 chr6 42044838 + Exonic hg19 KIRC TCGA-A3-3313-01A 4 7 5'UTR-CDS Intra-chr p21.1 p21.1 Seq+ 75672 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP53-MYOZ2 USP53 chr4 120138828 - MYOZ2 chr4 120107121 + Exonic hg19 OV TCGA-23-1120-01A 10 2 5'UTR-CDS Intra-chr q26 q26 Seq+ 75673 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP53-MYOZ2 USP53 chr4 120138828 - MYOZ2 chr4 120107121 + Exonic hg19 SKCM TCGA-EE-A2M5-06A 3 1 5'UTR-CDS Intra-chr q26 q26 Seq+ 75674 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP53-NAA16 USP53 chr4 120177678 - NAA16 chr13 41932440 + Exonic hg19 SARC TCGA-DX-A8BS-01A 3 1 Out-of-frame Inter-chr q26 q14.11 75675 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP54-ADK USP54 chr10 75385695 - ADK chr10 76285014 + Exonic hg19 SARC TCGA-DX-A1KZ-01A 3 3 5'UTR-CDS Intra-chr q22.2 q22.2 Seq+ 75676 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP54-AP3M1 USP54 chr10 75331179 - AP3M1 chr10 75898689 - Exonic hg19 STAD TCGA-VQ-A8PK-01A 2 21 CDS-5'UTR Intra-chr q22.2 q22.2 Seq+ 75677 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP54-DNAJB12 USP54 chr10 75331179 - DNAJB12 chr10 74104885 - Exonic hg19 READ TCGA-CI-6624-01C 2 2 Out-of-frame Intra-chr q22.2 q22.1 Seq+ 75678 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP54-NCRNA00245 USP54 chr10 75265066 - NCRNA00245 chr10 77167013 + Exonic hg19 BLCA TCGA-FD-A6TE-01A 34 21 Out-of-frame Intra-chr q22.2 75679 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP54-PCDH15 USP54 chr10 75331179 - PCDH15 chr10 56926411 - Exonic hg19 OV TCGA-13-1507-01A 2 3 CDS-5'UTR Intra-chr q22.2 q21.1 Seq+ 75680 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP54-PSMA6 USP54 chr10 75331179 - PSMA6 chr14 35786455 + Exonic hg19 UCEC TCGA-B5-A5OD-01A 82 152 Out-of-frame Inter-chr q22.2 q13.2 Seq+ 75681 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP54-TSPAN15 USP54 chr10 75385695 - TSPAN15 chr10 71243447 + Exonic hg19 LIHC TCGA-CC-A3MA-01A 2 14 5'UTR-CDS Intra-chr q22.2 q22.1 Seq+ 75682 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP6NL-ANKRD16 USP6NL chr10 11639630 - ANKRD16 chr10 5904654 - Exonic hg19 PRAD TCGA-YL-A9WY-01A 27 31 CDS-3'UTR Intra-chr p14 p15.1 Seq+ 75683 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP6NL-ARMC3 USP6NL chr10 11531101 - ARMC3 chr10 23297744 + Exonic hg19 LUAD TCGA-38-4630-01A 24 14 Out-of-frame Intra-chr p14 p12.2 Seq+ 75684 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP6NL-CCDC3 USP6NL chr10 11531101 - CCDC3 chr10 13116100 - Exonic hg19 BRCA TCGA-AN-A0AR-01A 14 12 CDS-5'UTR Intra-chr p14 p13 Seq+ 75685 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP6NL-PREP USP6NL chr10 11639630 - PREP chr6 105845802 - Exonic hg19 LIHC TCGA-RC-A6M6-01A 5 1 Out-of-frame Inter-chr p14 q21 75686 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP6NL-UPF2 USP6NL chr10 11532831 - UPF2 chr10 11973781 - Exonic hg19 STAD TCGA-BR-4357-01A 40 24 In-Frame Intra-chr p14 p14 Seq+ 75687 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP6NL-UPF2 USP6NL chr10 11523769 - UPF2 chr10 11985167 - Exonic hg19 STAD TCGA-BR-8289-01A 4 13 Out-of-frame Intra-chr p14 p14 Seq+ 75688 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP6NL-VPS26A USP6NL chr10 11543100 - VPS26A chr10 70915568 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 64 44 In-Frame Intra-chr p14 q22.1 Seq+ 75689 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP7-AC009365.3 USP7 chr16 9057064 - AC009365.3 chr7 132409536 + Exonic hg19 UCEC TCGA-AX-A3G6-01A 3 6 Out-of-frame Inter-chr p13.2 75690 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP7-SMARCA2 USP7 chr16 9057064 - SMARCA2 chr9 2161686 + Exonic hg19 BLCA TCGA-XF-AAML-01A 4 6 Out-of-frame Inter-chr p13.2 p24.3 Tumor suppressor gene Seq+ 75691 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP8-ADAMTSL3 USP8 chr15 50741682 - ADAMTSL3 chr15 84700087 + Exonic hg19 SARC TCGA-DX-A1L0-01A 3 1 Out-of-frame Intra-chr q21.2 q25.2 75692 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP8-BDP1 USP8 chr15 50769696 - BDP1 chr5 70786811 + Exonic hg19 SKCM TCGA-BF-A5EQ-01A 2 1 Out-of-frame Inter-chr q21.2 75693 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP8-C9orf93 USP8 chr15 50716711 - C9orf93 chr9 15777598 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 4 1 Out-of-frame Inter-chr q21.2 75694 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP8-SLC27A2 USP8 chr15 50731374 - SLC27A2 chr15 50489697 + Exonic hg19 BRCA TCGA-D8-A140-01A 2 1 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 75695 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP8-TSPAN3 USP8 chr15 50763992 - TSPAN3 chr15 77348597 - Exonic hg19 SARC TCGA-DX-A6YZ-01A 41 60 In-Frame Intra-chr q21.2 q24.3 Seq+ 75696 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP9X-ATP6AP2 USP9X chrX 41031211 - ATP6AP2 chrX 40464813 + Exonic hg19 LIHC TCGA-FV-A496-01A 50 16 Out-of-frame Intra-chr p11.4 Oncogene p11.4 Seq+ 75697 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP9X-BLVRB USP9X chrX 41078484 - BLVRB chr19 40964452 - Exonic hg19 HNSC TCGA-T2-A6WZ-01A 71 51 In-Frame Inter-chr p11.4 Oncogene q13.2 Seq+ 75698 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP9X-CD244 USP9X chrX 40945362 - CD244 chr1 160808839 - Exonic hg19 UCEC TCGA-EO-A3AS-01A 7 3 5'UTR-CDS Inter-chr p11.4 Oncogene q23.3 Seq+ 75699 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP9X-KDM6A USP9X chrX 41031211 - KDM6A chrX 44870206 + Exonic hg19 LUAD TCGA-86-7954-01A 17 24 Out-of-frame Intra-chr p11.4 Oncogene p11.3 Oncogene Tumor suppressor gene Seq+ 75700 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP9X-MAGEB18 USP9X chrX 40945362 - MAGEB18 chrX 26158297 + Exonic hg19 KIRC TCGA-BP-4349-01A 2 1 5'UTR-3'UTR Intra-chr p11.4 Oncogene p21.3 75701 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP9X-MAPKAPK5 USP9X chrX 40982977 - MAPKAPK5 chr12 112303054 + Exonic hg19 PRAD TCGA-HC-7818-01A 2 2 In-Frame Inter-chr p11.4 Oncogene q24.12 CAMK:MAPKAPK 75702 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP9X-MRPS31 USP9X chrX 41022130 - MRPS31 chr13 41303737 - Exonic hg19 HNSC TCGA-CV-6953-01A 32 10 Out-of-frame Inter-chr p11.4 Oncogene q14.11 Seq+ 75703 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP9X-RBBP7 USP9X chrX 40945362 - RBBP7 chrX 16881223 - Exonic hg19 SKCM TCGA-D3-A3CC-06A 61 60 5'UTR-CDS Intra-chr p11.4 Oncogene p22.2 Tumor suppressor gene Seq+ 75704 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP9X-ZNF692 USP9X chrX 40945362 - ZNF692 chr1 249152520 - Exonic hg19 LIHC TCGA-G3-A25Z-01A 2 1 5'UTR-5'UTR Inter-chr p11.4 Oncogene q44 Transcription factor 75705 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USP9Y-ERC1 USP9Y chrY 14851563 - ERC1 chr12 1345935 + Exonic hg19 SARC TCGA-SI-A71O-06A 2 2 Out-of-frame Inter-chr q11.221 75706 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USPL1-IGSF8 USPL1 chr13 31205611 - IGSF8 chr1 160063961 - Exonic hg19 BRCA TCGA-BH-A1EV-01A 16 5 In-Frame Inter-chr q12.3 q23.2 Seq+ 75707 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq USPL1-RB1 USPL1 chr13 31192193 - RB1 chr13 48916735 + Exonic hg19 HNSC TCGA-D6-6827-01A 4 6 5'UTR-CDS Intra-chr q12.3 q14.2 Oncogene Tumor suppressor gene Seq+ 75708 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UTP18-KCTD17 UTP18 chr17 49346265 - KCTD17 chr22 37455353 + Exonic hg19 LIHC TCGA-5R-AAAM-01A 3 1 Out-of-frame Inter-chr q21.33 q12.3 75709 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UTP20-ANKS1B UTP20 chr12 101711441 - ANKS1B chr12 99447087 - Exonic hg19 SKCM TCGA-BF-A1Q0-01A 6 3 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 75710 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UTP20-SCYL2 UTP20 chr12 101713413 - SCYL2 chr12 100727944 + Exonic hg19 PRAD TCGA-ZG-A8QY-01A 3 8 In-Frame Intra-chr q23.2 q23.1 Other:SCY1 Seq+ 75711 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UTP6-BCAS3 UTP6 chr17 30214255 - BCAS3 chr17 59112027 + Exonic hg19 HNSC TCGA-F7-A50I-01A 2 2 Out-of-frame Intra-chr q11.2 q23.2 Seq+ 75712 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UTP6-SLC13A5 UTP6 chr17 30219279 - SLC13A5 chr17 6610475 - Exonic hg19 SARC TCGA-DX-A6YT-01A 3 4 Out-of-frame Intra-chr q11.2 p13.1 Seq+ 75713 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UTRN-AIG1 UTRN chr6 144860579 - AIG1 chr6 143457972 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 33 10 In-Frame Intra-chr q24.2 q24.2 Seq+ 75714 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UTRN-ECT2L UTRN chr6 144898424 - ECT2L chr6 139222085 + Exonic hg19 BRCA TCGA-B6-A0IQ-01A 22 26 Out-of-frame Intra-chr q24.2 q24.1 Seq+ 75715 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UTRN-EIF4G3 UTRN chr6 145110415 - EIF4G3 chr1 21139732 - Exonic hg19 PRAD TCGA-CH-5763-01A 3 4 Out-of-frame Inter-chr q24.2 p36.12 Seq+ 75716 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UTRN-HEBP2 UTRN chr6 144613043 - HEBP2 chr6 138726282 + Exonic hg19 SARC TCGA-DX-A23T-01A 24 43 Out-of-frame Intra-chr q24.2 q24.1 Seq+ 75717 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UTRN-HMGA2 UTRN chr6 145021379 - HMGA2 chr12 66232299 + Exonic hg19 SARC TCGA-IF-A3RQ-01A 14 10 In-Frame Inter-chr q24.2 q14.3 Transcription factor Seq+ 75718 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UTRN-KIAA1244 UTRN chr6 144898424 - KIAA1244 chr6 138491799 + Exonic hg19 SARC TCGA-DX-A6BH-01A 9 4 Out-of-frame Intra-chr q24.2 75719 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UTRN-LAMB4 UTRN chr6 144769905 - LAMB4 chr7 107678040 - Exonic hg19 SARC TCGA-DX-A6BH-01A 13 13 Out-of-frame Inter-chr q24.2 q31.1 Seq+ 75720 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UTRN-LYRM4 UTRN chr6 144795895 - LYRM4 chr6 5109725 - Exonic hg19 BRCA TCGA-AQ-A04L-01B 25 14 In-Frame Intra-chr q24.2 p25.1 Seq+ 75721 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UTRN-MMADHC UTRN chr6 144844324 - MMADHC chr2 150443663 - Exonic hg19 PRAD TCGA-HC-7232-01A 23 32 CDS-5'UTR Inter-chr q24.2 q23.2 Seq+ 75722 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UTRN-OSTF1 UTRN chr6 145051622 - OSTF1 chr9 77732420 + Exonic hg19 SARC TCGA-DX-A48N-01A 19 4 In-Frame Inter-chr q24.2 q21.13 Seq+ 75723 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UTRN-PARK2 UTRN chr6 145051622 - PARK2 chr6 162683797 - Exonic hg19 BRCA TCGA-BH-A1FD-01A 5 4 Out-of-frame Intra-chr q24.2 Tumor suppressor gene Seq+ 75724 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UTRN-PLAGL1 UTRN chr6 144864006 - PLAGL1 chr6 144306311 - Exonic hg19 PRAD TCGA-CH-5741-01A 10 4 CDS-5'UTR Intra-chr q24.2 q24.2 Tumor suppressor gene Transcription factor 75725 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UTRN-SGK1 UTRN chr6 144999714 - SGK1 chr6 134528569 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 4 1 Out-of-frame Intra-chr q24.2 q23.2 AGC:SGK Oncogene Seq+ 75726 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UTRN-WDR67 UTRN chr6 145161968 - WDR67 chr8 124162276 + Exonic hg19 OV TCGA-23-1122-01A 6 3 In-Frame Inter-chr q24.2 Seq+ 75727 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UTRN-WIF1 UTRN chr6 144809970 - WIF1 chr12 65471634 - Exonic hg19 SARC TCGA-HB-A3YV-01A 16 4 In-Frame Inter-chr q24.2 q14.3 Tumor suppressor gene Seq+ 75728 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UVRAG-ACER3 UVRAG chr11 75728024 - ACER3 chr11 76726060 + Exonic hg19 SARC TCGA-LI-A9QH-01A 2 3 In-Frame Intra-chr q13.5 Tumor suppressor gene q13.5 Seq+ 75729 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UVRAG-CMPK1 UVRAG chr11 75672593 - CMPK1 chr1 47834141 + Exonic hg19 STAD TCGA-RD-A8N4-01A 4 7 In-Frame Inter-chr q13.5 Tumor suppressor gene p33 Oncogene Seq+ 75730 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UVRAG-DGAT2 UVRAG chr11 75526569 - DGAT2 chr11 75507373 + Exonic hg19 BRCA TCGA-B6-A0IK-01A 11 34 In-Frame Intra-chr q13.5 Tumor suppressor gene q13.5 Seq+ 75731 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UVRAG-FAM168A UVRAG chr11 75572825 - FAM168A chr11 73179537 - Exonic hg19 OV TCGA-24-0970-01B 9 4 CDS-5'UTR Intra-chr q13.5 Tumor suppressor gene q13.4 Seq+ 75732 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UVRAG-INTS4 UVRAG chr11 75623083 - INTS4 chr11 77618856 - Exonic hg19 BRCA TCGA-A1-A0SJ-01A 54 58 In-Frame Intra-chr q13.5 Tumor suppressor gene q14.1 Seq+ 75733 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UVRAG-KCNE3 UVRAG chr11 75563045 - KCNE3 chr11 74173148 - Exonic hg19 LUAD TCGA-86-8074-01A 9 4 CDS-5'UTR Intra-chr q13.5 Tumor suppressor gene q13.4 Seq+ 75734 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UVRAG-KIRREL3 UVRAG chr11 75728024 - KIRREL3 chr11 126432807 - Exonic hg19 BRCA TCGA-AR-A2LJ-01A 14 4 Out-of-frame Intra-chr q13.5 Tumor suppressor gene q24.2 Seq+ 75735 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UVRAG-LRTOMT UVRAG chr11 75623083 - LRTOMT chr11 71799343 + Exonic hg19 BRCA TCGA-A1-A0SM-01A 7 8 CDS-5'UTR Intra-chr q13.5 Tumor suppressor gene q13.4 Seq+ 75736 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UVRAG-MAP6 UVRAG chr11 75672593 - MAP6 chr11 75319367 - Exonic hg19 BRCA TCGA-AN-A03Y-01A 42 49 Out-of-frame Intra-chr q13.5 Tumor suppressor gene q13.5 Seq+ 75737 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UVRAG-MAP6 UVRAG chr11 75526569 - MAP6 chr11 75319367 - Exonic hg19 BRCA TCGA-D8-A1JC-01A 6 7 Out-of-frame Intra-chr q13.5 Tumor suppressor gene q13.5 Seq+ 75738 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UVRAG-MAP6 UVRAG chr11 75526569 - MAP6 chr11 75317049 - Exonic hg19 STAD TCGA-RD-A8N4-01A 3 21 In-Frame Intra-chr q13.5 Tumor suppressor gene q13.5 Seq+ 75739 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UVRAG-MS4A8B UVRAG chr11 75718665 - MS4A8B chr11 60470851 + Exonic hg19 SARC TCGA-3R-A8YX-01A 17 8 In-Frame Intra-chr q13.5 Tumor suppressor gene 75740 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UVRAG-NOM1 UVRAG chr11 75728024 - NOM1 chr7 156746797 + Exonic hg19 SARC TCGA-JV-A75J-01A 4 1 In-Frame Inter-chr q13.5 Tumor suppressor gene q36.3 75741 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UVRAG-OTUB1 UVRAG chr11 75623083 - OTUB1 chr11 63764002 + Exonic hg19 BRCA TCGA-AC-A4ZE-01A 23 15 Out-of-frame Intra-chr q13.5 Tumor suppressor gene q13.1 Seq+ 75742 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UVRAG-PACRG UVRAG chr11 75776832 - PACRG chr6 163733811 + Exonic hg19 STAD TCGA-BR-4366-01A 11 9 Out-of-frame Inter-chr q13.5 Tumor suppressor gene q26 Tumor suppressor gene 75743 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UVRAG-PAK1 UVRAG chr11 75827059 - PAK1 chr11 77034405 - Exonic hg19 BRCA TCGA-E2-A109-01A 25 16 Out-of-frame Intra-chr q13.5 Tumor suppressor gene q14.1 STE:STE20 Seq+ 75744 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UVRAG-PCBD1 UVRAG chr11 75623083 - PCBD1 chr10 72643805 - Exonic hg19 PRAD TCGA-G9-6361-01A 53 22 Out-of-frame Inter-chr q13.5 Tumor suppressor gene q22.1 Seq+ 75745 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UVRAG-RAD51B UVRAG chr11 75827059 - RAD51B chr14 69061202 + Exonic hg19 BRCA TCGA-AR-A24Q-01A 5 5 Out-of-frame Inter-chr q13.5 Tumor suppressor gene q24.1 Seq+ 75746 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UVRAG-SHANK2 UVRAG chr11 75623083 - SHANK2 chr11 70666787 - Exonic hg19 CHOL TCGA-W5-AA2X-01A 5 8 Out-of-frame Intra-chr q13.5 Tumor suppressor gene q13.4 Seq+ 75747 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UVRAG-SLCO2B1 UVRAG chr11 75563045 - SLCO2B1 chr11 74873700 + Exonic hg19 ESCA TCGA-R6-A8W5-01B 4 33 In-Frame Intra-chr q13.5 Tumor suppressor gene q13.4 Seq+ 75748 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UVRAG-TRIM29 UVRAG chr11 75572825 - TRIM29 chr11 119983184 - Exonic hg19 OV TCGA-23-1030-01A 83 85 In-Frame Intra-chr q13.5 Tumor suppressor gene q23.3 Seq+ 75749 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UVRAG-ZMAT4 UVRAG chr11 75728024 - ZMAT4 chr8 40389757 - Exonic hg19 BRCA TCGA-A2-A0ES-01A 9 19 In-Frame Inter-chr q13.5 Tumor suppressor gene p11.21 Transcription factor Seq+ 75750 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UXS1-C18orf45 UXS1 chr2 106774514 - C18orf45 chr18 20979611 - Exonic hg19 HNSC TCGA-CQ-A4C9-01A 4 2 Out-of-frame Inter-chr q12.2 75751 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq UXS1-C2orf40 UXS1 chr2 106746130 - C2orf40 chr2 106688300 + Exonic hg19 BLCA TCGA-G2-AA3F-01A 45 20 In-Frame Intra-chr q12.2 q12.2 Tumor suppressor gene Seq+ 75752 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAC14-CDH8 VAC14 chr16 70765398 - CDH8 chr16 61935377 - Exonic hg19 SKCM TCGA-ER-A196-01A 23 24 Out-of-frame Intra-chr q22.2 q21 Seq+ 75753 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAC14-HYDIN VAC14 chr16 70834700 - HYDIN chr16 70913659 - Exonic hg19 LUAD TCGA-44-5645-01A 2 4 Out-of-frame Intra-chr q22.2 Seq+ 75754 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAC14-WWOX VAC14 chr16 70765398 - WWOX chr16 79245505 + Exonic hg19 BLCA TCGA-BT-A20V-01A 31 33 Out-of-frame Intra-chr q22.2 q23.1 Tumor suppressor gene Seq+ 75755 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAMP1-CD27 VAMP1 chr12 6579696 - CD27 chr12 6554590 + Exonic hg19 CESC TCGA-DS-A1OD-01A 24 14 CDS-3'UTR Intra-chr p13.31 p13.31 Seq+ 75756 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAMP1-CHD4 VAMP1 chr12 6574056 - CHD4 chr12 6711663 - Exonic hg19 LIHC TCGA-DD-A1EB-01A 9 4 In-Frame Intra-chr p13.31 p13.31 Seq+ 75757 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAMP1-MARCH11 VAMP1 chr12 6574056 - 2019_ 3_ 11_ chr5 16067902 - Exonic hg19 SARC TCGA-DX-A1KZ-01A 2 4 Out-of-frame Inter-chr p13.31 p15.1 75758 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAMP3-SCAF4 VAMP3 chr1 7831445 - SCAF4 chr21 33058046 - Exonic hg19 PRAD TCGA-EJ-5498-01A 2 1 Out-of-frame Inter-chr p36.23 q22.11 75759 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAMP4-C12orf28 VAMP4 chr1 171707489 - C12orf28 chr12 70320351 + Exonic hg19 SARC TCGA-FX-A2QS-01A 4 3 Out-of-frame Inter-chr q24.3 75760 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VANGL2-PDE4DIP VANGL2 chr1 160370659 - PDE4DIP chr1 145021167 - Exonic hg19 LUAD TCGA-78-7146-01A 28 22 5'UTR-CDS Intra-chr q23.2 q21.2 Oncogene Seq+ 75761 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAPA-METTL4 VAPA chr18 9914332 - METTL4 chr18 2547528 - Exonic hg19 PAAD TCGA-FB-AAQ0-01A 2 3 Out-of-frame Intra-chr p11.22 p11.32 Seq+ 75762 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAPA-RAB31 VAPA chr18 9937063 - RAB31 chr18 9775275 + Exonic hg19 LIHC TCGA-ZP-A9D0-01A 24 17 In-Frame Intra-chr p11.22 p11.22 Seq+ 75763 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAPB-CASS4 VAPB chr20 56964573 - CASS4 chr20 55033396 + Exonic hg19 BRCA TCGA-AR-A0TW-01A 17 9 Out-of-frame Intra-chr q13.32 q13.31 Seq+ 75764 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAPB-CDH12 VAPB chr20 57009761 - CDH12 chr5 21802529 - Exonic hg19 BRCA TCGA-LL-A7SZ-01A 5 3 In-Frame Inter-chr q13.32 p14.3 Seq+ 75765 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAPB-PKIA VAPB chr20 56964573 - PKIA chr8 79485046 + Exonic hg19 SKCM TCGA-EE-A2MH-06A 21 12 5'UTR-5'UTR Inter-chr q13.32 q21.13 Seq+ 75766 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VARS-HSPA1L VARS chr6 31763323 - HSPA1L chr6 31779762 - Exonic hg19 LUSC TCGA-96-A4JK-01A 8 2 5'UTR-5'UTR Intra-chr Seq+ 75767 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VARS-VMP1 VARS chr6 31759387 - VMP1 chr17 57886157 + Exonic hg19 LUAD TCGA-55-8085-01A 2 1 Out-of-frame Inter-chr q23.1 75768 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VASN-RBFOX1 VASN chr16 4421994 - RBFOX1 chr16 7759058 + Exonic hg19 GBM TCGA-06-5856-01A 6 17 5'UTR-CDS Intra-chr p13.3 Seq+ 75769 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VASP-C1orf87 VASP chr19 46011034 - C1orf87 chr1 60506803 - Exonic hg19 THYM TCGA-ZB-A96H-01A 7 12 Out-of-frame Inter-chr q13.32 p32.1 Seq+ 75770 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VASP-CYP2S1 VASP chr19 46011034 - CYP2S1 chr19 41711863 + Exonic hg19 BRCA TCGA-D8-A147-01A 19 22 Out-of-frame Intra-chr q13.32 q13.2 Seq+ 75771 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAT1-BCAS3 VAT1 chr17 41166624 - BCAS3 chr17 59465980 + Exonic hg19 SKCM TCGA-ER-A19W-06A 2 2 Out-of-frame Intra-chr q21.31 q23.2 75772 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAT1-COL5A1 VAT1 chr17 41166624 - COL5A1 chr9 137533620 + Exonic hg19 SKCM TCGA-EE-A2MU-06A 2 1 Out-of-frame Inter-chr q21.31 q34.3 75773 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAT1-CTNND1 VAT1 chr17 41166624 - CTNND1 chr11 57574387 + Exonic hg19 SKCM TCGA-ER-A2NE-06A 3 5 3'UTR-CDS Inter-chr q21.31 q12.1 Tumor suppressor gene 75774 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAV1-C1orf198 VAV1 chr19 6843177 - C1orf198 chr1 230975654 - Exonic hg19 LIHC TCGA-DD-A11A-01A 8 4 Out-of-frame Inter-chr p13.3 q42.2 Seq+ 75775 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAV2-BRD3 VAV2 chr9 136671203 - BRD3 chr9 136898827 - Exonic hg19 LIHC TCGA-CC-A3MC-01A 5 2 Out-of-frame Intra-chr q34.2 q34.2 Atypical:BRD Oncogene Seq+ 75776 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAV2-BRD3 VAV2 chr9 136857197 - BRD3 chr9 136910543 - Exonic hg19 HNSC TCGA-MZ-A7D7-01A 6 2 In-Frame Intra-chr q34.2 q34.2 Atypical:BRD Oncogene Seq+ 75777 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAV2-BRD3 VAV2 chr9 136857197 - BRD3 chr9 136918712 - Exonic hg19 PCPG TCGA-QT-A5XM-01A 5 1 CDS-5'UTR Intra-chr q34.2 q34.2 Atypical:BRD Oncogene Seq+ 75778 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAV2-BRD3 VAV2 chr9 136726496 - BRD3 chr9 136907073 - Exonic hg19 MESO TCGA-TS-A7OU-01B 2 4 Out-of-frame Intra-chr q34.2 q34.2 Atypical:BRD Oncogene Seq+ 75779 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAV2-COL27A1 VAV2 chr9 136804225 - COL27A1 chr9 117047004 + Exonic hg19 PRAD TCGA-XQ-A8TA-01A 153 114 In-Frame Intra-chr q34.2 q32 Seq+ 75780 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAV2-FNBP1 VAV2 chr9 136857197 - FNBP1 chr9 132757237 - Exonic hg19 DLBC TCGA-GS-A9TW-01A 28 30 In-Frame Intra-chr q34.2 q34.11 Seq+ 75781 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAV2-RXRA VAV2 chr9 136857197 - RXRA chr9 137293478 + Exonic hg19 SKCM TCGA-EE-A2A1-06A 4 2 Out-of-frame Intra-chr q34.2 q34.2 Transcription factor Seq+ 75782 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAV3-RGL1 VAV3 chr1 108291590 - RGL1 chr1 183666538 + Exonic hg19 BRCA TCGA-E2-A1LA-01A 7 8 CDS-5'UTR Intra-chr p13.3 q25.3 75783 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAV3-ZHX2 VAV3 chr1 108138834 - ZHX2 chr8 123875716 + Exonic hg19 BRCA TCGA-E2-A14N-01A 8 2 CDS-5'UTR Inter-chr p13.3 q24.13 Tumor suppressor gene Transcription factor Seq+ 75784 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAX2-PAIP2B VAX2 chr2 71127998 - PAIP2B chr2 71429730 - Exonic hg19 UCEC TCGA-BG-A3PP-01A 27 13 CDS-5'UTR Intra-chr p13.3 Transcription factor p13.3 Seq+ 75785 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VAX2-UBE2CBP VAX2 chr2 71148415 - UBE2CBP chr6 83667169 - Exonic hg19 SARC TCGA-K1-A3PN-02A 5 3 Out-of-frame Inter-chr p13.3 Transcription factor 75786 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VBP1-BRCC3 VBP1 chrX 154444852 - BRCC3 chrX 154300602 + Exonic hg19 BRCA TCGA-S3-A6ZG-01A 4 1 In-Frame Intra-chr q28 q28 Seq+ 75787 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VBP1-GABRA3 VBP1 chrX 154444852 - GABRA3 chrX 151393317 - Exonic hg19 LUAD TCGA-55-6712-01A 91 35 Out-of-frame Intra-chr q28 q28 Seq+ 75788 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VCAN-GABRA5 VCAN chr5 82849341 - GABRA5 chr15 27188362 + Exonic hg19 MESO TCGA-3H-AB3M-01A 60 39 In-Frame Inter-chr q14.2 q12 Seq+ 75789 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VCL-C10orf11 VCL chr10 75860855 - C10orf11 chr10 78316967 + Exonic hg19 SARC TCGA-DX-A3UD-01A 11 10 Out-of-frame Intra-chr q22.2 Seq+ 75790 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VCL-C10orf11 VCL chr10 75802911 - C10orf11 chr10 77795766 + Exonic hg19 ESCA TCGA-L5-A4OT-01A 2 13 In-Frame Intra-chr q22.2 Seq+ 75791 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VCL-FGFR2 VCL chr10 75758133 - FGFR2 chr10 123239535 - Exonic hg19 THCA TCGA-EM-A3FP-01A 13 14 In-Frame Intra-chr q22.2 q26.13 TK:FGFR Oncogene Seq+ 75792 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VCL-KIAA0913 VCL chr10 75758133 - KIAA0913 chr10 75553346 + Exonic hg19 OV TCGA-61-1743-01A 2 6 In-Frame Intra-chr q22.2 Seq+ 75793 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VCL-SEC24C VCL chr10 75802911 - SEC24C chr10 75526518 + Exonic hg19 HNSC TCGA-CR-7402-01A 61 61 In-Frame Intra-chr q22.2 q22.2 Seq+ 75794 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VCL-SFTPD VCL chr10 75834661 - SFTPD chr10 81706418 - Exonic hg19 LUSC TCGA-43-6770-01A 10 4 CDS-5'UTR Intra-chr q22.2 q22.3 75795 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VCL-SFXN2 VCL chr10 75802911 - SFXN2 chr10 104486369 + Exonic hg19 HNSC TCGA-CN-A499-01A 5 5 CDS-5'UTR Intra-chr q22.2 q24.32 Seq+ 75796 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VCP-C9orf131 VCP chr9 35072334 - C9orf131 chr9 35042858 + Exonic hg19 LGG TCGA-E1-5304-01A 2 4 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 75797 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VCP-KIAA1539 VCP chr9 35072334 - KIAA1539 chr9 35108734 - Exonic hg19 ACC TCGA-OR-A5JA-01A 3 7 Out-of-frame Intra-chr p13.3 75798 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VDAC1-SKP1 VDAC1 chr5 133340338 - SKP1 chr5 133509713 - Exonic hg19 BRCA TCGA-AN-A0FJ-01A 5 10 3'UTR-5'UTR Intra-chr q31.1 q31.1 Seq+ 75799 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VDAC2-NEO1 VDAC2 chr10 76970947 - NEO1 chr15 73408881 + Exonic hg19 PRAD TCGA-2A-AAYU-01A 6 6 In-Frame Inter-chr q22.2 q24.1 Seq+ 75800 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VEGFA-DDX27 VEGFA chr6 43754224 - DDX27 chr20 47849303 + Exonic hg19 KIRC TCGA-A3-3313-01A 2 2 3'UTR-CDS Inter-chr p21.1 Tumor suppressor gene q13.13 75801 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VEGFA-HIST1H4H VEGFA chr6 43746655 - HIST1H4H chr6 26281815 - Exonic hg19 BLCA TCGA-XF-AAMG-01A 85 61 Out-of-frame Intra-chr p21.1 Tumor suppressor gene p22.2 Seq+ 75802 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VEGFA-NRD1 VEGFA chr6 43739049 - NRD1 chr1 52306186 - Exonic hg19 SARC TCGA-IE-A6BZ-01A 74 33 Out-of-frame Inter-chr p21.1 Tumor suppressor gene Seq+ 75803 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VEGFA-RSPH9 VEGFA chr6 43746655 - RSPH9 chr6 43638526 + Exonic hg19 CESC TCGA-DS-A3LQ-01A 91 56 In-Frame Intra-chr p21.1 Tumor suppressor gene p21.1 Seq+ 75804 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VEGFA-STK38 VEGFA chr6 43745402 - STK38 chr6 36467767 - Exonic hg19 LGG TCGA-TM-A7CF-01A 22 4 In-Frame Intra-chr p21.1 Tumor suppressor gene p21.31 Seq+ 75805 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VEGFA-STK38 VEGFA chr6 43745402 - STK38 chr6 36467767 - Exonic hg19 LGG TCGA-TM-A7CF-02A 7 8 In-Frame Intra-chr p21.1 Tumor suppressor gene p21.31 Seq+ 75806 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VEZF1-DDX42 VEZF1 chr17 56065440 - DDX42 chr17 61864394 + Exonic hg19 LUSC TCGA-66-2783-01A 52 46 CDS-5'UTR Intra-chr q22 Transcription factor q23.3 Seq+ 75807 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VEZF1-KRT222 VEZF1 chr17 56065440 - KRT222 chr17 38816459 - Exonic hg19 ESCA TCGA-JY-A6FB-01A 15 70 In-Frame Intra-chr q22 Transcription factor q21.2 Seq+ 75808 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VEZT-C12orf29 VEZT chr12 95645847 - C12orf29 chr12 88433925 + Exonic hg19 SARC TCGA-DX-A3M1-01A 24 7 In-Frame Intra-chr q22 Tumor suppressor gene q21.32 Seq+ 75809 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VEZT-FGD6 VEZT chr12 95611662 - FGD6 chr12 95502337 - Exonic hg19 TGCT TCGA-WZ-A7V3-01A 5 17 Out-of-frame Intra-chr q22 Tumor suppressor gene q22 Seq+ 75810 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VGF-CLCN3 VGF chr7 100805797 - CLCN3 chr4 170623929 + Exonic hg19 KIRP TCGA-BQ-5875-01A 2 28 Out-of-frame Inter-chr q22.1 q33 75811 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VGF-SIAE VGF chr7 100805797 - SIAE chr11 124543777 - Exonic hg19 SKCM TCGA-D3-A2J6-06A 2 52 3'UTR-5'UTR Inter-chr q22.1 q24.2 75812 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VGF-SIAE VGF chr7 100805797 - SIAE chr11 124543777 - Exonic hg19 SKCM TCGA-D3-A3C1-06A 2 194 3'UTR-5'UTR Inter-chr q22.1 q24.2 75813 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VGLL4-CHL1 VGLL4 chr3 11643307 - CHL1 chr3 419501 + Exonic hg19 HNSC TCGA-D6-6826-01A 57 30 In-Frame Intra-chr p25.2 p26.3 Seq+ 75814 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VGLL4-FOXP1 VGLL4 chr3 11597544 - FOXP1 chr3 71007472 - Exonic hg19 PRAD TCGA-CH-5740-01A 3 3 3'UTR-3'UTR Intra-chr p25.2 p13 Oncogene Tumor suppressor gene Transcription factor 75815 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VGLL4-IQSEC1 VGLL4 chr3 11744445 - IQSEC1 chr3 12983365 - Exonic hg19 STAD TCGA-VQ-A92D-01A 2 14 Out-of-frame Intra-chr p25.2 p25.2 Seq+ 75816 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VGLL4-LIMD1 VGLL4 chr3 11744445 - LIMD1 chr3 45707142 + Exonic hg19 BLCA TCGA-BL-A0C8-01A 289 254 In-Frame Intra-chr p25.2 p21.31 Tumor suppressor gene Seq+ 75817 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VGLL4-SH3BP5 VGLL4 chr3 11744445 - SH3BP5 chr3 15311384 - Exonic hg19 BRCA TCGA-BH-A18J-01A 19 15 Out-of-frame Intra-chr p25.2 p25.1 Seq+ 75818 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VGLL4-SYNPR VGLL4 chr3 11744445 - SYNPR chr3 63542219 + Exonic hg19 BRCA TCGA-AR-A0TS-01A 30 29 Out-of-frame Intra-chr p25.2 p14.2 Seq+ 75819 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VGLL4-TAMM41 VGLL4 chr3 11744445 - TAMM41 chr3 11832055 - Exonic hg19 LUAD TCGA-49-4494-01A 2 1 In-Frame Intra-chr p25.2 p25.2 Seq+ 75820 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VGLL4-TAMM41 VGLL4 chr3 11744445 - TAMM41 chr3 11880788 - Exonic hg19 BRCA TCGA-AN-A0AL-01A 5 1 Out-of-frame Intra-chr p25.2 p25.2 Seq+ 75821 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VGLL4-TAMM41 VGLL4 chr3 11744445 - TAMM41 chr3 11871338 - Exonic hg19 BLCA TCGA-FD-A43Y-01A 3 1 Out-of-frame Intra-chr p25.2 p25.2 Seq+ 75822 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VGLL4-TMEM40 VGLL4 chr3 11643307 - TMEM40 chr3 12791339 - Exonic hg19 BLCA TCGA-2F-A9KW-01A 12 12 CDS-5'UTR Intra-chr p25.2 p25.2 Seq+ 75823 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VGLL4-TMEM40 VGLL4 chr3 11744445 - TMEM40 chr3 12791339 - Exonic hg19 STAD TCGA-VQ-A925-01A 7 91 CDS-5'UTR Intra-chr p25.2 p25.2 Seq+ 75824 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VGLL4-UPF2 VGLL4 chr3 11744445 - UPF2 chr10 12021164 - Exonic hg19 BLCA TCGA-XF-A8HD-01A 254 293 Out-of-frame Inter-chr p25.2 p14 Seq+ 75825 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VHL-C3orf24 VHL chr3 10183871 - C3orf24 chr3 10123215 - Exonic hg19 LGG TCGA-KT-A7W1-01A 3 1 CDS-3'UTR Intra-chr p25.3 Oncogene Tumor suppressor gene 75826 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VHL-KIAA1430 VHL chr3 10188320 - KIAA1430 chr4 186128945 - Exonic hg19 KIRC TCGA-CZ-5468-01A 15 7 Out-of-frame Inter-chr p25.3 Oncogene Tumor suppressor gene 75827 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VIM-CLCN3 VIM chr10 17279592 - CLCN3 chr4 170623929 + Exonic hg19 ACC TCGA-PK-A5HB-01A 2 162 Out-of-frame Inter-chr p13 Tumor suppressor gene q33 75828 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VIM-DNM1L VIM chr10 17279584 - DNM1L chr12 32905677 + Exonic hg19 KIRC TCGA-B0-5399-01A 2 15 Out-of-frame Inter-chr p13 Tumor suppressor gene p11.21 75829 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VIM-EEA1 VIM chr10 17279592 - EEA1 chr12 93229203 - Exonic hg19 HNSC TCGA-D6-6826-01A 2 49 Out-of-frame Inter-chr p13 Tumor suppressor gene q22 Transcription factor 75830 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VIM-IQCE VIM chr10 17279592 - IQCE chr7 2641075 + Exonic hg19 LUAD TCGA-75-7025-01A 2 40 3'UTR-CDS Inter-chr p13 Tumor suppressor gene p22.3 75831 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VIM-LAMA4 VIM chr10 17279584 - LAMA4 chr6 112507969 - Exonic hg19 SKCM TCGA-EB-A4IS-01A 2 1 Out-of-frame Inter-chr p13 Tumor suppressor gene q21 75832 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VIM-LAMA4 VIM chr10 17279584 - LAMA4 chr6 112507969 - Exonic hg19 SKCM TCGA-EE-A2GT-06A 2 1 Out-of-frame Inter-chr p13 Tumor suppressor gene q21 75833 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VIM-PEX1 VIM chr10 17279592 - PEX1 chr7 92146729 - Exonic hg19 SKCM TCGA-D3-A2JO-06A 2 26 Out-of-frame Inter-chr p13 Tumor suppressor gene q21.2 75834 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VIM-PLEKHA5 VIM chr10 17279592 - PLEKHA5 chr12 19514516 + Exonic hg19 SKCM TCGA-BF-A1PV-01A 2 2 3'UTR-CDS Inter-chr p13 Tumor suppressor gene p12.3 75835 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VIM-PLEKHA5 VIM chr10 17279592 - PLEKHA5 chr12 19441012 + Exonic hg19 UVM TCGA-VD-A8K9-01A 2 161 Out-of-frame Inter-chr p13 Tumor suppressor gene p12.3 75836 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VIM-PTPRC VIM chr10 17279592 - PTPRC chr1 198710998 + Exonic hg19 BLCA TCGA-K4-A5RH-01A 2 2 3'UTR-CDS Inter-chr p13 Tumor suppressor gene Tumor suppressor gene 75837 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VIM-SGK3 VIM chr10 17279592 - SGK3 chr8 67716610 + Exonic hg19 SKCM TCGA-EE-A2MF-06A 2 6 3'UTR-CDS Inter-chr p13 Tumor suppressor gene q13.1 AGC:SGK 75838 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VIM-SIAE VIM chr10 17279584 - SIAE chr11 124543777 - Exonic hg19 KIRC TCGA-A3-3317-01A 2 6 3'UTR-5'UTR Inter-chr p13 Tumor suppressor gene q24.2 75839 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VIM-STAT6 VIM chr10 17279584 - STAT6 chr12 57496773 - Exonic hg19 STAD TCGA-BR-8682-01A 2 1 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.3 Transcription factor 75840 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VIPAR-C14orf45 VIPAR chr14 77900185 - C14orf45 chr14 74544899 + Exonic hg19 PRAD TCGA-EJ-7318-01B 7 2 Out-of-frame Intra-chr 75841 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VIPAR-ISM2 VIPAR chr14 77910592 - ISM2 chr14 77951262 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 3 5 Out-of-frame Intra-chr q24.3 75842 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VKORC1L1-ACHE VKORC1L1 chr7 65338552 - ACHE chr7 100488959 - Exonic hg19 READ TCGA-CI-6621-01A 12 24 In-Frame Intra-chr q11.21 q22.1 Tumor suppressor gene Seq+ 75843 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VLDLR-SLC1A1 VLDLR chr9 2622271 - SLC1A1 chr9 4544567 + Exonic hg19 MESO TCGA-SH-A7BC-01A 7 12 In-Frame Intra-chr p24.2 p24.2 Seq+ 75844 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VMP1-APPBP2 VMP1 chr17 57816308 - APPBP2 chr17 58577848 - Exonic hg19 COAD TCGA-AZ-4323-01A 6 4 In-Frame Intra-chr q23.1 q23.2 75845 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VMP1-BCAS3 VMP1 chr17 57842499 - BCAS3 chr17 59001768 + Exonic hg19 UCEC TCGA-EY-A4KR-01A 11 11 In-Frame Intra-chr q23.1 q23.2 Seq+ 75846 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VMP1-BRCA1 VMP1 chr17 57851246 - BRCA1 chr17 41234592 - Exonic hg19 SARC TCGA-KF-A41W-01A 4 2 In-Frame Intra-chr q23.1 q21.31 Oncogene Tumor suppressor gene Seq+ 75847 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VMP1-CDC42EP4 VMP1 chr17 57889147 - CDC42EP4 chr17 71282751 - Exonic hg19 BRCA TCGA-C8-A275-01A 13 8 CDS-5'UTR Intra-chr q23.1 q25.1 Seq+ 75848 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VMP1-CLTC VMP1 chr17 57816308 - CLTC chr17 57721637 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 26 29 In-Frame Intra-chr q23.1 q23.1 Seq+ 75849 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VMP1-MARCH10 VMP1 chr17 57895134 - 2019_ 3_ 10_ chr17 60788705 - Exonic hg19 BRCA TCGA-AO-A0J5-01A 5 11 Out-of-frame Intra-chr q23.1 q23.2 Seq+ 75850 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VMP1-PRR11 VMP1 chr17 57785109 - PRR11 chr17 57247109 + Exonic hg19 UCS TCGA-N8-A56S-01A 5 4 5'UTR-5'UTR Intra-chr q23.1 q22 Seq+ 75851 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VMP1-PSMA6 VMP1 chr17 57851246 - PSMA6 chr14 35786455 + Exonic hg19 BRCA TCGA-A8-A09A-01A 12 16 Out-of-frame Inter-chr q23.1 q13.2 Seq+ 75852 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VMP1-PTRH2 VMP1 chr17 57785109 - PTRH2 chr17 57775339 - Exonic hg19 HNSC TCGA-CX-7086-01A 31 19 5'UTR-5'UTR Intra-chr q23.1 q23.1 Seq+ 75853 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VMP1-RNFT1 VMP1 chr17 57851246 - RNFT1 chr17 58031507 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 55 62 In-Frame Intra-chr q23.1 q23.1 Seq+ 75854 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VMP1-RP11-433C9.2 VMP1 chr17 57851246 - RP11-433C9.2 chr3 184144380 + Exonic hg19 BRCA TCGA-AQ-A04H-01B 28 30 Out-of-frame Inter-chr q23.1 75855 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VMP1-TBX4 VMP1 chr17 57816308 - TBX4 chr17 59533849 + Exonic hg19 STAD TCGA-D7-8579-01A 2 16 Out-of-frame Intra-chr q23.1 q23.2 Transcription factor Seq+ 75856 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VMP1-TK1 VMP1 chr17 57785109 - TK1 chr17 76171699 - Exonic hg19 SARC TCGA-HB-A3YV-01A 53 63 5'UTR-CDS Intra-chr q23.1 q25.3 Seq+ 75857 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VMP1-TUBD1 VMP1 chr17 57895134 - TUBD1 chr17 57955695 - Exonic hg19 HNSC TCGA-BA-A6DJ-01A 10 9 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 75858 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VMP1-TUBD1 VMP1 chr17 57895134 - TUBD1 chr17 57944110 - Exonic hg19 CESC TCGA-EK-A3GJ-01A 6 8 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 75859 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VNN1-C6orf192 VNN1 chr6 133032848 - C6orf192 chr6 133091475 - Exonic hg19 LIHC TCGA-BC-A10R-01A 14 11 Out-of-frame Intra-chr q23.2 75860 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VNN3-PTPRK VNN3 chr6 133055392 - PTPRK chr6 128563747 - Exonic hg19 UCEC TCGA-KJ-A3U4-01A 2 2 3'UTR-CDS Intra-chr q23.2 Tumor suppressor gene 75861 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPRBP-C2CD3 VPRBP chr3 51533889 - C2CD3 chr11 73850873 - Exonic hg19 UCEC TCGA-BG-A3PP-01A 3 4 5'UTR-CDS Inter-chr q13.4 Seq+ 75862 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPRBP-POC1A VPRBP chr3 51497130 - POC1A chr3 52185116 - Exonic hg19 LUAD TCGA-55-8301-01A 5 6 In-Frame Intra-chr p21.2 Seq+ 75863 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13A-KIF13A VPS13A chr9 79792720 - KIF13A chr6 17987375 - Exonic hg19 READ TCGA-AH-6549-01A 4 4 In-Frame Inter-chr q21.2 p22.3 Seq+ 75864 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13A-RP11-362K2.2 VPS13A chr9 79792720 - RP11-362K2.2 chr12 59206196 + Exonic hg19 MESO TCGA-TS-A8AY-01A 66 54 Out-of-frame Inter-chr q21.2 75865 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13B-AKAP7 VPS13B chr8 100148980 - AKAP7 chr6 131602670 + Exonic hg19 PRAD TCGA-KK-A7B4-01A 23 21 In-Frame Inter-chr q22.2 q23.2 Seq+ 75866 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13B-ANKRD46 VPS13B chr8 100791259 - ANKRD46 chr8 101522867 - Exonic hg19 BLCA TCGA-DK-A3IM-01A 4 3 Out-of-frame Intra-chr q22.2 q22.3 75867 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13B-C8orf47 VPS13B chr8 100168971 - C8orf47 chr8 99105449 + Exonic hg19 PRAD TCGA-J4-A67T-01A 2 3 Out-of-frame Intra-chr q22.2 75868 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13B-C8orf56 VPS13B chr8 100454863 - C8orf56 chr8 104145597 - Exonic hg19 BLCA TCGA-K4-A4AC-01A 50 21 3'UTR-3'UTR Intra-chr q22.2 Seq+ 75869 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13B-C8orf56 VPS13B chr8 100847966 - C8orf56 chr8 104145597 - Exonic hg19 BLCA TCGA-UY-A78O-01A 4 3 3'UTR-3'UTR Intra-chr q22.2 Seq+ 75870 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13B-CCDC6 VPS13B chr8 100287482 - CCDC6 chr10 61592411 - Exonic hg19 THCA TCGA-DO-A1JZ-01A 4 2 Out-of-frame Inter-chr q22.2 q21.2 75871 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13B-CDADC1 VPS13B chr8 100403932 - CDADC1 chr13 49865820 + Exonic hg19 BLCA TCGA-DK-A2I6-01A 26 12 In-Frame Inter-chr q22.2 q14.2 Seq+ 75872 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13B-DPYS VPS13B chr8 100568881 - DPYS chr8 105405219 - Exonic hg19 LUSC TCGA-60-2706-01A 6 2 In-Frame Intra-chr q22.2 q22.3 75873 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13B-EFR3A VPS13B chr8 100205285 - EFR3A chr8 132952746 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 11 3 In-Frame Intra-chr q22.2 q24.22 Seq+ 75874 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13B-GMDS VPS13B chr8 100844880 - GMDS chr6 1742820 - Exonic hg19 BRCA TCGA-C8-A3M8-01A 9 8 Out-of-frame Inter-chr q22.2 p25.3 Seq+ 75875 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13B-MYO9B VPS13B chr8 100205285 - MYO9B chr19 17322456 + Exonic hg19 BLCA TCGA-DK-A1A6-01A 6 5 Out-of-frame Inter-chr q22.2 p13.11 Seq+ 75876 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13B-NECAB1 VPS13B chr8 100454863 - NECAB1 chr8 91929720 + Exonic hg19 BRCA TCGA-C8-A27A-01A 6 2 Out-of-frame Intra-chr q22.2 q21.3 Seq+ 75877 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13B-OSR2 VPS13B chr8 100026163 - OSR2 chr8 99961067 + Exonic hg19 STAD TCGA-B7-A5TN-01A 2 14 5'UTR-5'UTR Intra-chr q22.2 q22.2 Transcription factor Seq+ 75878 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13B-OSR2 VPS13B chr8 100050794 - OSR2 chr8 99961067 + Exonic hg19 BRCA TCGA-BH-A203-01A 2 1 5'UTR-5'UTR Intra-chr q22.2 q22.2 Transcription factor Seq+ 75879 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13B-PPP1R16A VPS13B chr8 100589861 - PPP1R16A chr8 145721844 + Exonic hg19 BRCA TCGA-BH-A0B1-01A 11 7 Out-of-frame Intra-chr q22.2 q24.3 Seq+ 75880 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13B-RGS22 VPS13B chr8 100821758 - RGS22 chr8 101092583 - Exonic hg19 COAD TCGA-AY-A71X-01A 2 1 In-Frame Intra-chr q22.2 q22.2 Seq+ 75881 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13B-RGS22 VPS13B chr8 100205285 - RGS22 chr8 100994344 - Exonic hg19 STAD TCGA-VQ-A8DZ-01A 2 11 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 75882 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13B-SGCZ VPS13B chr8 100205285 - SGCZ chr8 14181713 - Exonic hg19 LUAD TCGA-97-8171-01A 3 4 Out-of-frame Intra-chr q22.2 p22 Seq+ 75883 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13B-STAU2 VPS13B chr8 100050794 - STAU2 chr8 74334937 - Exonic hg19 SARC TCGA-DX-A3M1-01A 29 8 In-Frame Intra-chr q22.2 q21.11 Seq+ 75884 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13C-C15orf59 VPS13C chr15 62199463 - C15orf59 chr15 74032983 - Exonic hg19 LUAD TCGA-05-4395-01A 4 1 In-Frame Intra-chr q22.2 q24.1 75885 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13C-CENPN VPS13C chr15 62333523 - CENPN chr16 81053705 + Exonic hg19 PRAD TCGA-EJ-5530-01A 4 4 Out-of-frame Inter-chr q22.2 q23.2 75886 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13C-HERC1 VPS13C chr15 62232846 - HERC1 chr15 63904755 - Exonic hg19 STAD TCGA-FP-8631-01A 3 4 In-Frame Intra-chr q22.2 q22.31 Seq+ 75887 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13C-RB1CC1 VPS13C chr15 62292763 - RB1CC1 chr8 53599527 - Exonic hg19 KICH TCGA-KL-8341-01A 8 2 CDS-5'UTR Inter-chr q22.2 q11.23 Tumor suppressor gene Seq+ 75888 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13C-SH2D4A VPS13C chr15 62269281 - SH2D4A chr8 19250829 + Exonic hg19 PRAD TCGA-KK-A7B1-01A 10 2 Out-of-frame Inter-chr q22.2 p21.3 75889 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13D-MFN2 VPS13D chr1 12395884 - MFN2 chr1 12066595 + Exonic hg19 STAD TCGA-FP-8631-01A 2 4 Out-of-frame Intra-chr p36.22 p36.22 Seq+ 75890 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13D-RERE VPS13D chr1 12294420 - RERE chr1 8601377 - Exonic hg19 BRCA TCGA-A2-A04W-01A 4 8 Out-of-frame Intra-chr p36.22 p36.23 Seq+ 75891 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13D-TNFRSF1B VPS13D chr1 12476880 - TNFRSF1B chr1 12252488 + Exonic hg19 SKCM TCGA-FS-A1ZE-06A 21 7 Out-of-frame Intra-chr p36.22 p36.22 75892 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13D-TNFRSF8 VPS13D chr1 12516186 - TNFRSF8 chr1 12157158 + Exonic hg19 PRAD TCGA-KK-A5A1-01A 6 2 CDS-3'UTR Intra-chr p36.22 p36.22 75893 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS13D-VEGFC VPS13D chr1 12353761 - VEGFC chr4 177650900 - Exonic hg19 CHOL TCGA-W5-AA2Z-01A 8 11 In-Frame Inter-chr p36.22 q34.3 Seq+ 75894 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS18-NTRK3 VPS18 chr15 41193212 - NTRK3 chr15 88423659 - Exonic hg19 COAD TCGA-A6-2674-01A 6 5 In-Frame Intra-chr q15.1 q25.3 Oncogene Tumor suppressor gene Seq+ 75895 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS24-BIRC6 VPS24 chr2 86915355 - BIRC6 chr2 32688262 + Exonic hg19 SKCM TCGA-EE-A3JI-06A 2 1 Out-of-frame Intra-chr p22.3 75896 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS26A-AGBL4 VPS26A chr10 70917967 - AGBL4 chr1 49511472 - Exonic hg19 PRAD TCGA-ZG-A8QW-01A 3 2 In-Frame Inter-chr q22.1 p33 Seq+ 75897 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS26A-GDAP1L1 VPS26A chr10 70892803 - GDAP1L1 chr20 42891870 + Exonic hg19 BRCA TCGA-AO-A03O-01A 12 9 Out-of-frame Inter-chr q22.1 q13.12 Seq+ 75898 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS26B-C15orf41 VPS26B chr11 134104947 - C15orf41 chr15 36936479 + Exonic hg19 ACC TCGA-OR-A5JY-01A 11 8 In-Frame Inter-chr q25 q14 Seq+ 75899 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS28-SF3A1 VPS28 chr8 145649000 - SF3A1 chr22 30742508 - Exonic hg19 PRAD TCGA-EJ-7783-01A 2 9 3'UTR-CDS Inter-chr q24.3 q12.2 75900 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS29-HSPB8 VPS29 chr12 110933817 - HSPB8 chr12 119658519 + Exonic hg19 SARC TCGA-PC-A5DN-01A 406 383 CDS-3'UTR Intra-chr q24.11 q24.23 Seq+ 75901 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS33A-ATXN2 VPS33A chr12 122745808 - ATXN2 chr12 111926584 - Exonic hg19 LGG TCGA-DU-6397-02A 5 2 In-Frame Intra-chr q24.31 q24.12 75902 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS35-PHKB VPS35 chr16 46723043 - PHKB chr16 47730292 + Exonic hg19 BLCA TCGA-DK-A2I1-01A 6 77 In-Frame Intra-chr q11.2 q12.1 Seq+ 75903 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS35-SLC6A2 VPS35 chr16 46702842 - SLC6A2 chr16 55690556 + Exonic hg19 BRCA TCGA-E2-A109-01A 8 9 CDS-5'UTR Intra-chr q11.2 q12.2 Seq+ 75904 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS37A-WDR78 VPS37A chr8 17104878 - WDR78 chr1 67337192 - Exonic hg19 SARC TCGA-DX-AB2O-01A 7 2 In-Frame Inter-chr p22 p31.3 Seq+ 75905 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS37C-SLC3A2 VPS37C chr11 60928863 - SLC3A2 chr11 62651929 + Exonic hg19 BRCA TCGA-AO-A03P-01A 31 47 5'UTR-5'UTR Intra-chr q12.2 q12.3 Seq+ 75906 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS39-LYSMD2 VPS39 chr15 42492094 - LYSMD2 chr15 52017318 - Exonic hg19 LGG TCGA-DU-A7TC-01A 11 9 Out-of-frame Intra-chr q15.1 q21.2 Seq+ 75907 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS39-TMEM87A VPS39 chr15 42492094 - TMEM87A chr15 42553447 - Exonic hg19 LUSC TCGA-L3-A524-01A 14 6 Out-of-frame Intra-chr q15.1 q15.1 75908 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS41-AES VPS41 chr7 38829401 - AES chr19 3054192 - Exonic hg19 HNSC TCGA-CV-7421-01A 25 16 Out-of-frame Inter-chr p14.1 p13.3 Seq+ 75909 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS41-NPSR1 VPS41 chr7 38908746 - NPSR1 chr7 34851382 + Exonic hg19 BLCA TCGA-DK-A3IV-01A 16 4 In-Frame Intra-chr p14.1 p14.3 Seq+ 75910 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS41-SDK1 VPS41 chr7 38835065 - SDK1 chr7 4150295 + Exonic hg19 LGG TCGA-DU-6399-01A 3 3 In-Frame Intra-chr p14.1 p22.2 75911 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS41-TSGA14 VPS41 chr7 38794302 - TSGA14 chr7 130067859 - Exonic hg19 ACC TCGA-OR-A5KZ-01A 13 6 Out-of-frame Intra-chr p14.1 75912 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS4B-SLC22A15 VPS4B chr18 61089466 - SLC22A15 chr1 116562203 + Exonic hg19 LUAD TCGA-44-A4SS-01A 5 2 In-Frame Inter-chr q21.33 p13.1 75913 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS52-TAPBP VPS52 chr6 33231261 - TAPBP chr6 33273164 - Exonic hg19 TGCT TCGA-2G-AAKD-01A 2 1 Out-of-frame Intra-chr 75914 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS52-ZNF358 VPS52 chr6 33231261 - ZNF358 chr19 7584091 + Exonic hg19 LGG TCGA-TM-A7CF-01A 25 17 CDS-5'UTR Inter-chr p13.2 Transcription factor Seq+ 75915 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS52-ZNF358 VPS52 chr6 33231261 - ZNF358 chr19 7584091 + Exonic hg19 LGG TCGA-TM-A7CF-02A 37 36 CDS-5'UTR Inter-chr p13.2 Transcription factor Seq+ 75916 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS53-ABR VPS53 chr17 600658 - ABR chr17 1003975 - Exonic hg19 HNSC TCGA-CV-A45X-01A 18 9 In-Frame Intra-chr Tumor suppressor gene p13.3 Seq+ 75917 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS53-GLOD4 VPS53 chr17 613773 - GLOD4 chr17 681984 - Exonic hg19 LUSC TCGA-94-8035-01A 4 1 In-Frame Intra-chr Tumor suppressor gene p13.3 Seq+ 75918 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS53-GLOD4 VPS53 chr17 505035 - GLOD4 chr17 681984 - Exonic hg19 LUSC TCGA-98-A53C-01A 12 10 In-Frame Intra-chr Tumor suppressor gene p13.3 Seq+ 75919 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS53-GLOD4 VPS53 chr17 613773 - GLOD4 chr17 681984 - Exonic hg19 LGG TCGA-HW-7487-01A 43 15 In-Frame Intra-chr Tumor suppressor gene p13.3 Seq+ 75920 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS53-HS3ST5 VPS53 chr17 600658 - HS3ST5 chr6 114489626 - Exonic hg19 BRCA TCGA-A1-A0SO-01A 22 22 CDS-5'UTR Inter-chr Tumor suppressor gene q22.1 Seq+ 75921 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS53-MYH2 VPS53 chr17 505035 - MYH2 chr17 10444014 - Exonic hg19 BRCA TCGA-D8-A1JM-01A 10 3 Out-of-frame Intra-chr Tumor suppressor gene p13.1 Seq+ 75922 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS53-RTN4RL1 VPS53 chr17 600658 - RTN4RL1 chr17 1841102 - Exonic hg19 BRCA TCGA-OL-A5RW-01A 2 8 Out-of-frame Intra-chr Tumor suppressor gene p13.3 Seq+ 75923 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS53-SMG6 VPS53 chr17 600658 - SMG6 chr17 1989195 - Exonic hg19 LIHC TCGA-EP-A2KA-01A 4 8 In-Frame Intra-chr Tumor suppressor gene p13.3 Seq+ 75924 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS53-TXNDC17 VPS53 chr17 559078 - TXNDC17 chr17 6545073 + Exonic hg19 SARC TCGA-DX-A3M1-01A 6 6 Out-of-frame Intra-chr Tumor suppressor gene p13.1 Seq+ 75925 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS53-ZZEF1 VPS53 chr17 600658 - ZZEF1 chr17 4027345 - Exonic hg19 LUAD TCGA-55-8087-01A 6 4 In-Frame Intra-chr Tumor suppressor gene p13.2 Seq+ 75926 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS54-PELI1 VPS54 chr2 64210998 - PELI1 chr2 64335513 - Exonic hg19 STAD TCGA-BR-8678-01A 6 19 CDS-5'UTR Intra-chr p14 p14 Seq+ 75927 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS54-PELI1 VPS54 chr2 64246072 - PELI1 chr2 64335513 - Exonic hg19 BLCA TCGA-G2-A2EF-01A 3 4 5'UTR-5'UTR Intra-chr p14 p14 Seq+ 75928 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS72-GABPB2 VPS72 chr1 151150477 - GABPB2 chr1 151060666 + Exonic hg19 BLCA TCGA-XF-AAML-01A 13 12 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 75929 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS72-ROBO2 VPS72 chr1 151156793 - ROBO2 chr3 77617464 + Exonic hg19 LUAD TCGA-91-A4BC-01A 10 8 In-Frame Inter-chr q21.3 p12.3 Seq+ 75930 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS72-RORC VPS72 chr1 151162481 - RORC chr1 151789756 - Exonic hg19 LUAD TCGA-NJ-A4YF-01A 6 4 Out-of-frame Intra-chr q21.3 q21.3 Transcription factor 75931 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS8-ARHGAP39 VPS8 chr3 184573606 - ARHGAP39 chr8 145831080 - Exonic hg19 LGG TCGA-HT-7676-01A 2 1 CDS-5'UTR Inter-chr q27.2 q24.3 75932 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS8-EHHADH VPS8 chr3 184573606 - EHHADH chr3 184966305 - Exonic hg19 STAD TCGA-CG-4449-01A 4 3 Out-of-frame Intra-chr q27.2 q27.2 Seq+ 75933 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS8-EIF2AK4 VPS8 chr3 184588593 - EIF2AK4 chr15 40318178 + Exonic hg19 STAD TCGA-CG-4449-01A 9 8 In-Frame Inter-chr q27.2 q15.1 Seq+ 75934 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS8-EPHB3 VPS8 chr3 184742177 - EPHB3 chr3 184293618 + Exonic hg19 STAD TCGA-IN-A6RN-01A 2 4 Out-of-frame Intra-chr q27.2 q27.1 Tumor suppressor gene Seq+ 75935 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS8-GLYR1 VPS8 chr3 184530013 - GLYR1 chr16 4882913 - Exonic hg19 STAD TCGA-CG-4477-01A 3 7 5'UTR-CDS Inter-chr q27.2 p13.3 Transcription factor 75936 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS8-NLGN1 VPS8 chr3 184742177 - NLGN1 chr3 173322069 + Exonic hg19 LUSC TCGA-56-A4BX-01A 31 14 CDS-5'UTR Intra-chr q27.2 q26.31 Seq+ 75937 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VPS8-NPHP3 VPS8 chr3 184542573 - NPHP3 chr3 132405231 - Exonic hg19 LUSC TCGA-66-2781-01A 2 1 In-Frame Intra-chr q27.2 q22.1 75938 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VRK1-PAPOLA VRK1 chr14 97263784 - PAPOLA chr14 97022184 + Exonic hg19 CESC TCGA-VS-A8EC-01A 13 43 5'UTR-CDS Intra-chr q32.2 CK1:VRK q32.2 Seq+ 75939 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VRK1-SAMD4A VRK1 chr14 97327072 - SAMD4A chr14 55168780 + Exonic hg19 HNSC TCGA-HD-7753-01A 3 1 Out-of-frame Intra-chr q32.2 CK1:VRK q22.2 Seq+ 75940 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VRK2-CHSY1 VRK2 chr2 58276102 - CHSY1 chr15 101719185 - Exonic hg19 BRCA TCGA-E9-A1NF-01A 2 5 Out-of-frame Inter-chr p16.1 CK1:VRK q26.3 Seq+ 75941 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VRK2-EIF2C3 VRK2 chr2 58276102 - EIF2C3 chr1 36520547 + Exonic hg19 LUSC TCGA-43-3920-01A 2 1 Out-of-frame Inter-chr p16.1 CK1:VRK 75942 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VRK3-PPP6R1 VRK3 chr19 50504047 - PPP6R1 chr19 55753856 - Exonic hg19 CESC TCGA-C5-A907-01A 30 21 In-Frame Intra-chr q13.33 CK1:VRK q13.42 Seq+ 75943 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VRK3-TGFB1 VRK3 chr19 50504047 - TGFB1 chr19 41838186 - Exonic hg19 CESC TCGA-IR-A3LH-01A 117 33 Out-of-frame Intra-chr q13.33 CK1:VRK q13.2 Tumor suppressor gene Seq+ 75944 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VSIG1-MID2 VSIG1 chrX 107288409 - MID2 chrX 107169324 + Exonic hg19 PRAD TCGA-KK-A7B1-01A 3 1 In-Frame Intra-chr q22.3 q22.3 Seq+ 75945 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VSIG1-MID2 VSIG1 chrX 107288409 - MID2 chrX 107169324 + Exonic hg19 PAAD TCGA-US-A77G-01A 2990 3179 In-Frame Intra-chr q22.3 q22.3 Seq+ 75946 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VSIG1-MID2 VSIG1 chrX 107301431 - MID2 chrX 107159232 + Exonic hg19 STAD TCGA-VQ-A91K-01A 2 26 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 75947 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VSTM2L-CTNNBL1 VSTM2L chr20 36561991 - CTNNBL1 chr20 36468504 + Exonic hg19 PCPG TCGA-QR-A70A-01A 3 2 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 75948 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VTCN1-NUP88 VTCN1 chr1 117695713 - NUP88 chr17 5292280 - Exonic hg19 BRCA TCGA-E9-A244-01A 91 105 Out-of-frame Inter-chr p12 p13.2 Seq+ 75949 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VTCN1-PTGFRN VTCN1 chr1 117753446 - PTGFRN chr1 117484337 + Exonic hg19 OV TCGA-29-1785-01A 7 25 Out-of-frame Intra-chr p12 p13.1 Seq+ 75950 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VTI1A-ACSL5 VTI1A chr10 114224416 - ACSL5 chr10 114154676 + Exonic hg19 HNSC TCGA-F7-A623-01A 7 2 Out-of-frame Intra-chr q25.2 q25.2 Seq+ 75951 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VTI1A-C10orf90 VTI1A chr10 114298089 - C10orf90 chr10 128202508 - Exonic hg19 LUAD TCGA-97-7554-01A 8 5 In-Frame Intra-chr q25.2 q26.2 Seq+ 75952 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VTI1A-HDAC1 VTI1A chr10 114298089 - HDAC1 chr1 32790080 + Exonic hg19 UCS TCGA-N9-A4Q1-01A 10 9 In-Frame Inter-chr q25.2 p35.2 Tumor suppressor gene Seq+ 75953 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VTI1A-SUGP2 VTI1A chr10 114428757 - SUGP2 chr19 19141891 - Exonic hg19 PRAD TCGA-CH-5766-01A 3 4 CDS-5'UTR Inter-chr q25.2 p13.11 Seq+ 75954 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VWA2-IDE VWA2 chr10 116042330 - IDE chr10 94297307 - Exonic hg19 LGG TCGA-P5-A5EU-01A 2 2 Out-of-frame Intra-chr q25.3 q23.33 Seq+ 75955 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VWC2-RAB20 VWC2 chr7 49815727 - RAB20 chr13 111176544 - Exonic hg19 GBM TCGA-06-2558-01A 2 3 Out-of-frame Inter-chr p12.2 q34 Seq+ 75956 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq VWCE-SH3D19 VWCE chr11 61048096 - SH3D19 chr4 152098107 - Exonic hg19 SARC TCGA-X6-A7WC-01A 5 4 CDS-5'UTR Inter-chr q12.2 q31.3 Seq+ 75957 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WAC-APBB1IP WAC chr10 28824686 - APBB1IP chr10 26849034 + Exonic hg19 BRCA TCGA-AO-A0JI-01A 109 99 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 75958 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WAC-APBB1IP WAC chr10 28872434 - APBB1IP chr10 26855890 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 36 31 In-Frame Intra-chr p12.1 p12.1 Seq+ 75959 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WAC-RDX WAC chr10 28909462 - RDX chr11 110050642 - Exonic hg19 LUAD TCGA-86-7955-01A 2 1 Out-of-frame Inter-chr p12.1 q22.3 75960 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WAC-UBAC2 WAC chr10 28872434 - UBAC2 chr13 99966351 + Exonic hg19 BRCA TCGA-GM-A2DF-01A 30 16 Out-of-frame Inter-chr p12.1 q32.3 Seq+ 75961 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WAPAL-MMRN2 WAPAL chr10 88277328 - MMRN2 chr10 88696882 - Exonic hg19 LIHC TCGA-DD-A39X-01A 17 12 In-Frame Intra-chr q23.2 Seq+ 75962 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WAPAL-SIAE WAPAL chr10 88195014 - SIAE chr11 124543777 - Exonic hg19 PRAD TCGA-G9-6356-01A 2 1 3'UTR-5'UTR Inter-chr q24.2 75963 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WARS-C8orf12 WARS chr14 100835424 - C8orf12 chr8 11291429 + Exonic hg19 LUAD TCGA-91-7771-01A 12 9 CDS-5'UTR Inter-chr q32.2 Seq+ 75964 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WARS-CCNY WARS chr14 100828045 - CCNY chr10 35772332 + Exonic hg19 THCA TCGA-EM-A3AQ-01A 13 8 In-Frame Inter-chr q32.2 p11.21 Seq+ 75965 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WARS-EPB41L4B WARS chr14 100835424 - EPB41L4B chr9 111979425 - Exonic hg19 STAD TCGA-IN-AB1X-01A 12 133 Out-of-frame Inter-chr q32.2 q31.3 Seq+ 75966 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WARS-PPP2R3C WARS chr14 100800125 - PPP2R3C chr14 35585943 - Exonic hg19 LUAD TCGA-62-8402-01A 2 1 3'UTR-CDS Intra-chr q32.2 q13.2 75967 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WARS-UTRN WARS chr14 100800816 - UTRN chr6 144665237 + Exonic hg19 LUAD TCGA-78-7542-01A 2 1 Out-of-frame Inter-chr q32.2 q24.2 75968 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WARS2-DLG2 WARS2 chr1 119683178 - DLG2 chr11 84865695 - Exonic hg19 LUAD TCGA-55-A490-01A 3 1 In-Frame Inter-chr p12 q14.1 Seq+ 75969 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WARS2-NTNG1 WARS2 chr1 119618973 - NTNG1 chr1 108023233 + Exonic hg19 SKCM TCGA-D3-A5GS-06A 25 13 Out-of-frame Intra-chr p12 p13.3 Seq+ 75970 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WARS2-PHGDH WARS2 chr1 119618973 - PHGDH chr1 120263793 + Exonic hg19 LUSC TCGA-60-2725-01A 9 6 In-Frame Intra-chr p12 p12 Seq+ 75971 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WARS2-REG4 WARS2 chr1 119683178 - REG4 chr1 120337308 - Exonic hg19 KIRC TCGA-CJ-4894-01A 12 4 Out-of-frame Intra-chr p12 p12 75972 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WARS2-RPF1 WARS2 chr1 119683178 - RPF1 chr1 84961565 + Exonic hg19 DLBC TCGA-GR-7353-01A 38 32 In-Frame Intra-chr p12 p22.3 Tumor suppressor gene Seq+ 75973 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WARS2-TMEM87B WARS2 chr1 119618973 - TMEM87B chr2 112832489 + Exonic hg19 CESC TCGA-C5-A7X5-01A 2 4 In-Frame Inter-chr p12 q13 Seq+ 75974 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WARS2-TPST1 WARS2 chr1 119618973 - TPST1 chr7 65817492 + Exonic hg19 BRCA TCGA-E9-A243-01A 18 6 In-Frame Inter-chr p12 q11.21 Seq+ 75975 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WARS2-ZAR1 WARS2 chr1 119618973 - ZAR1 chr4 48496118 + Exonic hg19 CESC TCGA-C5-A7X5-01A 8 2 In-Frame Inter-chr p12 p11 Seq+ 75976 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WASF1-SLC41A3 WASF1 chr6 110434529 - SLC41A3 chr3 125731592 - Exonic hg19 SARC TCGA-FX-A3NK-01A 24 10 In-Frame Inter-chr q21 q21.3 Seq+ 75977 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WASF2-ACOT7 WASF2 chr1 27816497 - ACOT7 chr1 6355040 - Exonic hg19 CESC TCGA-C5-A8YQ-01A 4 4 5'UTR-CDS Intra-chr p36.11 p36.31 Seq+ 75978 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WASF2-AHDC1 WASF2 chr1 27816497 - AHDC1 chr1 27879696 - Exonic hg19 LUSC TCGA-22-4604-01A 17 10 5'UTR-5'UTR Intra-chr p36.11 p35.3 Transcription factor Seq+ 75979 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WASF2-AHDC1 WASF2 chr1 27816497 - AHDC1 chr1 27885394 - Exonic hg19 LUSC TCGA-56-8082-01A 94 25 5'UTR-5'UTR Intra-chr p36.11 p35.3 Transcription factor Seq+ 75980 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WASF2-AHDC1 WASF2 chr1 27755271 - AHDC1 chr1 27879696 - Exonic hg19 LUSC TCGA-66-2758-01A 46 40 CDS-5'UTR Intra-chr p36.11 p35.3 Transcription factor Seq+ 75981 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WASF2-AHDC1 WASF2 chr1 27816497 - AHDC1 chr1 27861427 - Exonic hg19 LUSC TCGA-66-2800-01A 67 36 5'UTR-3'UTR Intra-chr p36.11 p35.3 Transcription factor Seq+ 75982 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WASF2-AHDC1 WASF2 chr1 27816497 - AHDC1 chr1 27885394 - Exonic hg19 LUSC TCGA-85-8580-01A 29 14 5'UTR-5'UTR Intra-chr p36.11 p35.3 Transcription factor Seq+ 75983 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WASF2-AHDC1 WASF2 chr1 27816497 - AHDC1 chr1 27879696 - Exonic hg19 LUSC TCGA-94-8035-01A 5 1 5'UTR-5'UTR Intra-chr p36.11 p35.3 Transcription factor Seq+ 75984 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WASF2-AHDC1 WASF2 chr1 27816497 - AHDC1 chr1 27879696 - Exonic hg19 HNSC TCGA-CR-7370-01A 75 54 5'UTR-5'UTR Intra-chr p36.11 p35.3 Transcription factor Seq+ 75985 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WASF2-AHDC1 WASF2 chr1 27816497 - AHDC1 chr1 27885394 - Exonic hg19 BRCA TCGA-PL-A8LZ-01A 5 2 5'UTR-5'UTR Intra-chr p36.11 p35.3 Transcription factor Seq+ 75986 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WASF2-AHDC1 WASF2 chr1 27816497 - AHDC1 chr1 27885394 - Exonic hg19 HNSC TCGA-UF-A7J9-01A 37 23 5'UTR-5'UTR Intra-chr p36.11 p35.3 Transcription factor Seq+ 75987 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WASF2-FAM65B WASF2 chr1 27755271 - FAM65B chr6 24876045 - Exonic hg19 LUSC TCGA-66-2765-01A 8 23 CDS-5'UTR Inter-chr p36.11 Seq+ 75988 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WASF2-FGR WASF2 chr1 27816497 - FGR chr1 27951662 - Exonic hg19 LUSC TCGA-66-2759-01A 45 4 5'UTR-5'UTR Intra-chr p36.11 p35.3 TK:Src Seq+ 75989 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WASF2-FGR WASF2 chr1 27816497 - FGR chr1 27951662 - Exonic hg19 SKCM TCGA-ER-A19W-06A 29 7 5'UTR-5'UTR Intra-chr p36.11 p35.3 TK:Src Seq+ 75990 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WASF2-FGR WASF2 chr1 27816497 - FGR chr1 27951662 - Exonic hg19 ESCA TCGA-L5-A891-01A 2 21 5'UTR-5'UTR Intra-chr p36.11 p35.3 TK:Src Seq+ 75991 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WASF2-FGR WASF2 chr1 27816497 - FGR chr1 27951662 - Exonic hg19 UCS TCGA-NA-A4R1-01A 97 27 5'UTR-5'UTR Intra-chr p36.11 p35.3 TK:Src Seq+ 75992 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WASF2-IFI6 WASF2 chr1 27816497 - IFI6 chr1 27995857 - Exonic hg19 ESCA TCGA-VR-A8EX-01A 7 43 5'UTR-5'UTR Intra-chr p36.11 p35.3 Seq+ 75993 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WASF2-TMEM222 WASF2 chr1 27816497 - TMEM222 chr1 27657211 + Exonic hg19 LGG TCGA-DB-A64O-01A 20 6 5'UTR-5'UTR Intra-chr p36.11 p36.11 Seq+ 75994 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WASF2-VANGL1 WASF2 chr1 27816497 - VANGL1 chr1 116193898 + Exonic hg19 UCEC TCGA-BG-A3PP-01A 3 1 5'UTR-5'UTR Intra-chr p36.11 p13.1 Seq+ 75995 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WASF3-ATP8A2 WASF3 chr13 27131956 - ATP8A2 chr13 26411301 + Exonic hg19 LIHC TCGA-DD-AA3A-01A 3 6 5'UTR-CDS Intra-chr q12.13 q12.13 Seq+ 75996 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WASF3-CDK8 WASF3 chr13 27257111 - CDK8 chr13 26911704 + Exonic hg19 PRAD TCGA-ZG-A9KY-01A 3 2 Out-of-frame Intra-chr q12.13 q12.13 CMGC:CDK Oncogene Seq+ 75997 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WASL-FEZF1 WASL chr7 123388672 - FEZF1 chr7 121944565 - Exonic hg19 PRAD TCGA-KK-A6E2-01A 5 4 CDS-5'UTR Intra-chr q31.32 q31.32 Transcription factor Seq+ 75998 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WBP11-LGR5 WBP11 chr12 14956286 - LGR5 chr12 71898394 + Exonic hg19 SARC TCGA-DX-A1KZ-01A 10 21 5'UTR-CDS Intra-chr p12.3 q21.1 Seq+ 75999 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WBP2NL-MEI1 WBP2NL chr22 42394884 - MEI1 chr22 42172106 + Exonic hg19 BRCA TCGA-B6-A0I1-01A 8 1 Out-of-frame Intra-chr q13.2 q13.2 76000 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WBP4-FANK1 WBP4 chr13 41635811 - FANK1 chr10 127668730 + Exonic hg19 BRCA TCGA-A2-A1FV-01A 7 4 Out-of-frame Inter-chr q14.11 q26.2 Seq+ 76001 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WBSCR17-AUTS2 WBSCR17 chr7 70598026 - AUTS2 chr7 70229738 + Exonic hg19 UCS TCGA-NA-A4R0-01A 2 1 Out-of-frame Intra-chr q11.22 q11.22 76002 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WBSCR17-PPP1R9A WBSCR17 chr7 70800719 - PPP1R9A chr7 94827661 + Exonic hg19 GBM TCGA-19-2619-01A 2 8 In-Frame Intra-chr q11.22 q21.3 Seq+ 76003 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDFY1-KIAA1486 WDFY1 chr2 224809865 - KIAA1486 chr2 226516148 + Exonic hg19 SARC TCGA-DX-AATS-01A 2 2 Out-of-frame Intra-chr q36.1 76004 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDFY1-PARD3B WDFY1 chr2 224809865 - PARD3B chr2 206364620 + Exonic hg19 SARC TCGA-DX-A1KY-01A 40 13 In-Frame Intra-chr q36.1 q33.3 Seq+ 76005 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDFY2-AL109749.1 WDFY2 chr13 52158960 - AL109749.1 chrX 131188659 + Exonic hg19 SARC TCGA-X6-A7WB-01A 25 14 Out-of-frame Inter-chr q14.3 76006 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDFY2-FOXO1 WDFY2 chr13 52158960 - FOXO1 chr13 41134997 - Exonic hg19 STAD TCGA-BR-8678-01A 11 15 Out-of-frame Intra-chr q14.3 q14.11 Oncogene Tumor suppressor gene Transcription factor Seq+ 76007 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDFY3-HNRNPD WDFY3 chr4 85818064 - HNRNPD chr4 83276554 - Exonic hg19 PRAD TCGA-J4-A67M-01A 21 21 5'UTR-CDS Intra-chr q21.23 q21.22 Seq+ 76008 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDFY3-PLAGL1 WDFY3 chr4 85887362 - PLAGL1 chr6 144290115 - Exonic hg19 SARC TCGA-HB-A3YV-01A 19 23 5'UTR-5'UTR Inter-chr q21.23 q24.2 Tumor suppressor gene Transcription factor Seq+ 76009 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDHD1-DLGAP5 WDHD1 chr14 55493429 - DLGAP5 chr14 55621524 - Exonic hg19 UCEC TCGA-5B-A90C-01A 137 122 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 76010 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDHD1-DLGAP5 WDHD1 chr14 55473998 - DLGAP5 chr14 55617566 - Exonic hg19 CESC TCGA-DS-A3LQ-01A 9 5 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 76011 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDHD1-DLGAP5 WDHD1 chr14 55467221 - DLGAP5 chr14 55621524 - Exonic hg19 SKCM TCGA-FR-A7U8-06A 5 4 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 76012 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDPCP-SERTAD2 WDPCP chr2 63660879 - SERTAD2 chr2 64864009 - Exonic hg19 CESC TCGA-VS-A8EC-01A 2 2 CDS-5'UTR Intra-chr p15 p14 Seq+ 76013 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDPCP-VPS54 WDPCP chr2 63660879 - VPS54 chr2 64176297 - Exonic hg19 BRCA TCGA-AR-A256-01A 4 1 Out-of-frame Intra-chr p15 p14 Seq+ 76014 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR11-PDLIM1 WDR11 chr10 122664928 - PDLIM1 chr10 97031541 - Exonic hg19 HNSC TCGA-DQ-7593-01A 13 7 In-Frame Intra-chr q26.12 Tumor suppressor gene q23.33 Seq+ 76015 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR12-PARD3B WDR12 chr2 203776159 - PARD3B chr2 206418048 + Exonic hg19 LUAD TCGA-78-7539-01A 2 2 Out-of-frame Intra-chr q33.2 q33.3 76016 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR17-LTA4H WDR17 chr4 177017736 - LTA4H chr12 96413018 - Exonic hg19 LGG TCGA-HT-8106-01A 2 5 Out-of-frame Inter-chr q34.2 q23.1 76017 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR18-H2AFX WDR18 chr19 985975 - H2AFX chr11 118964971 - Exonic hg19 LAML TCGA-AB-2857-03A 13 4 Out-of-frame Inter-chr p13.3 q23.3 Tumor suppressor gene Seq+ 76018 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR20-ASNA1 WDR20 chr14 102606509 - ASNA1 chr19 12856191 + Exonic hg19 GBM TCGA-14-0736-02A 64 88 In-Frame Inter-chr q32.31 p13.13 Seq+ 76019 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR20-DYNC1H1 WDR20 chr14 102606509 - DYNC1H1 chr14 102514154 + Exonic hg19 STAD TCGA-BR-7716-01A 3 50 Out-of-frame Intra-chr q32.31 q32.31 Seq+ 76020 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR20-LGALS2 WDR20 chr14 102606509 - LGALS2 chr22 37967938 - Exonic hg19 LGG TCGA-DU-A7TD-01A 29 35 In-Frame Inter-chr q32.31 q13.1 Seq+ 76021 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR20-LRP10 WDR20 chr14 102606509 - LRP10 chr14 23341947 + Exonic hg19 PRAD TCGA-2A-A8VT-01A 31 23 Out-of-frame Intra-chr q32.31 q11.2 Seq+ 76022 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR20-PPP2R5C WDR20 chr14 102661457 - PPP2R5C chr14 102302506 + Exonic hg19 UCEC TCGA-FI-A3PV-01A 31 20 Out-of-frame Intra-chr q32.31 q32.31 Tumor suppressor gene Seq+ 76023 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR25-MAST2 WDR25 chr14 100848083 - MAST2 chr1 46425058 + Exonic hg19 UCEC TCGA-A5-A7WK-01A 2 1 Out-of-frame Inter-chr q32.2 p34.1 AGC:MAST 76024 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR34-NDUFV1 WDR34 chr9 131395940 - NDUFV1 chr11 67375697 + Exonic hg19 THYM TCGA-ZB-A96B-01A 2 2 3'UTR-CDS Inter-chr q34.11 q13.2 76025 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR34-ZER1 WDR34 chr9 131402970 - ZER1 chr9 131505024 - Exonic hg19 LUAD TCGA-38-4630-01A 89 63 In-Frame Intra-chr q34.11 q34.11 Seq+ 76026 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR35-PUM2 WDR35 chr2 20151176 - PUM2 chr2 20463221 - Exonic hg19 LUSC TCGA-39-5035-01A 2 2 Out-of-frame Intra-chr p24.1 p24.1 Seq+ 76027 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR35-PUM2 WDR35 chr2 20130157 - PUM2 chr2 20483247 - Exonic hg19 BRCA TCGA-A7-A13D-01A 2 1 In-Frame Intra-chr p24.1 p24.1 Seq+ 76028 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR36-C5orf13 WDR36 chr5 110428316 - C5orf13 chr5 111092876 - Exonic hg19 HNSC TCGA-BA-4077-01B 15 9 Out-of-frame Intra-chr q22.1 76029 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR37-AHNAK WDR37 chr10 1130478 - AHNAK chr11 62259303 - Exonic hg19 LIHC TCGA-BC-A217-01A 87 14 Out-of-frame Inter-chr p15.3 q12.3 Tumor suppressor gene Seq+ 76030 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR37-FAM107B WDR37 chr10 1142186 - FAM107B chr10 14709690 - Exonic hg19 BLCA TCGA-CU-A3QU-01A 2 2 In-Frame Intra-chr p15.3 p13 Seq+ 76031 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR37-PCDH12 WDR37 chr10 1151207 - PCDH12 chr5 141337810 - Exonic hg19 LGG TCGA-WY-A859-01A 10 6 Out-of-frame Inter-chr p15.3 q31.3 Seq+ 76032 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR37-TUBAL3 WDR37 chr10 1132297 - TUBAL3 chr10 5443050 - Exonic hg19 BLCA TCGA-GC-A3RB-01A 29 14 Out-of-frame Intra-chr p15.3 p15.1 Seq+ 76033 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR45L-B3GNTL1 WDR45L chr17 80601825 - B3GNTL1 chr17 80904859 - Exonic hg19 LUSC TCGA-90-6837-01A 225 105 Out-of-frame Intra-chr Seq+ 76034 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR45L-RAB40B WDR45L chr17 80601825 - RAB40B chr17 80622432 - Exonic hg19 BRCA TCGA-A2-A04P-01A 2 2 In-Frame Intra-chr q25.3 76035 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR45L-RAB40B WDR45L chr17 80601825 - RAB40B chr17 80622432 - Exonic hg19 STAD TCGA-VQ-A928-01A 8 58 In-Frame Intra-chr q25.3 76036 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR45L-SEPT4 WDR45L chr17 80583265 - SEPT4 chr17 56599462 - Exonic hg19 BRCA TCGA-AN-A0FT-01A 29 39 Out-of-frame Intra-chr q22 Tumor suppressor gene Seq+ 76037 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR47-C1orf194 WDR47 chr1 109565977 - C1orf194 chr1 109649281 - Exonic hg19 TGCT TCGA-2G-AAGC-01A 2 1 In-Frame Intra-chr p13.3 p13.3 76038 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR47-C1orf194 WDR47 chr1 109560140 - C1orf194 chr1 109649281 - Exonic hg19 BRCA TCGA-D8-A27R-01A 2 2 In-Frame Intra-chr p13.3 p13.3 76039 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR47-RP11-389E17.1 WDR47 chr1 109556463 - RP11-389E17.1 chr4 178881916 + Exonic hg19 LUSC TCGA-60-2711-01A 6 2 Out-of-frame Inter-chr p13.3 76040 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR49-VEPH1 WDR49 chr3 167277852 - VEPH1 chr3 157099165 - Exonic hg19 LGG TCGA-HT-7470-01A 8 7 In-Frame Intra-chr q26.1 q25.32 Seq+ 76041 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR52-SLC35A5 WDR52 chr3 113135372 - SLC35A5 chr3 112299393 + Exonic hg19 PRAD TCGA-HC-7230-01A 2 1 Out-of-frame Intra-chr q13.2 76042 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR55-PAIP2 WDR55 chr5 140044688 - PAIP2 chr5 138699448 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 6 4 CDS-5'UTR Intra-chr q31.3 q31.2 Tumor suppressor gene Seq+ 76043 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR59-AARSD1 WDR59 chr16 75018862 - AARSD1 chr17 41123713 - Exonic hg19 LIHC TCGA-BC-A216-01A 9 6 In-Frame Inter-chr q23.1 q21.31 76044 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR59-ASB9 WDR59 chr16 74942806 - ASB9 chrX 15272966 - Exonic hg19 GBM TCGA-06-2569-01A 2 15 Out-of-frame Inter-chr q23.1 p22.2 Seq+ 76045 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR59-CDH11 WDR59 chr16 75018862 - CDH11 chr16 64982690 - Exonic hg19 SKCM TCGA-EE-A2MN-06A 5 11 Out-of-frame Intra-chr q23.1 q21 Oncogene Tumor suppressor gene Seq+ 76046 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR59-CFDP1 WDR59 chr16 75018862 - CFDP1 chr16 75339080 - Exonic hg19 LGG TCGA-DU-A7TC-01A 2 5 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 76047 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR59-CFDP1 WDR59 chr16 74919551 - CFDP1 chr16 75339080 - Exonic hg19 UCEC TCGA-EO-A1Y7-01A 25 10 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 76048 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR59-CFDP1 WDR59 chr16 74955845 - CFDP1 chr16 75339080 - Exonic hg19 UCS TCGA-N5-A4RA-01A 11 11 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 76049 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR59-CHST5 WDR59 chr16 74922067 - CHST5 chr16 75567081 - Exonic hg19 BLCA TCGA-2F-A9KP-01A 5 5 CDS-5'UTR Intra-chr q23.1 q23.1 Seq+ 76050 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR59-KARS WDR59 chr16 74982417 - KARS chr16 75670445 - Exonic hg19 ESCA TCGA-R6-A8W5-01B 22 159 In-Frame Intra-chr q23.1 q23.1 Seq+ 76051 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR59-KIFC3 WDR59 chr16 75018862 - KIFC3 chr16 57795083 - Exonic hg19 SKCM TCGA-EE-A2MN-06A 9 19 In-Frame Intra-chr q23.1 q21 Seq+ 76052 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR6-CPNE8 WDR6 chr3 49044964 - CPNE8 chr12 39047872 - Exonic hg19 BLCA TCGA-ZF-AA4T-01A 10 12 Out-of-frame Inter-chr p21.31 q12 Seq+ 76053 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR60-VIPR2 WDR60 chr7 158684024 - VIPR2 chr7 158851269 - Exonic hg19 KIRC TCGA-A3-3363-01A 14 24 In-Frame Intra-chr q36.3 q36.3 Seq+ 76054 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR62-AC002511.1 WDR62 chr19 36550932 - AC002511.1 chr19 35897487 + Exonic hg19 BRCA TCGA-AR-A1AI-01A 2 2 Out-of-frame Intra-chr q13.12 q13.12 76055 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR62-HCST WDR62 chr19 36575646 - HCST chr19 36394253 + Exonic hg19 BLCA TCGA-BT-A3PH-01A 89 55 In-Frame Intra-chr q13.12 q13.12 Seq+ 76056 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR62-LRFN3 WDR62 chr19 36574143 - LRFN3 chr19 36430312 + Exonic hg19 SARC TCGA-DX-A3UC-01A 4 2 CDS-5'UTR Intra-chr q13.12 q13.12 Seq+ 76057 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR62-TRAPPC6A WDR62 chr19 36580208 - TRAPPC6A chr19 45668228 - Exonic hg19 LGG TCGA-TM-A84B-01A 11 15 In-Frame Intra-chr q13.12 q13.32 Seq+ 76058 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR70-ADAMTS12 WDR70 chr5 37605340 - ADAMTS12 chr5 33751653 - Exonic hg19 BRCA TCGA-A2-A0SY-01A 16 8 In-Frame Intra-chr p13.2 p13.2 Seq+ 76059 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR70-AGXT2 WDR70 chr5 37396672 - AGXT2 chr5 35014224 - Exonic hg19 SKCM TCGA-D3-A1Q3-06A 77 36 In-Frame Intra-chr p13.2 p13.2 Seq+ 76060 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR70-C10orf25 WDR70 chr5 37396672 - C10orf25 chr10 45495864 - Exonic hg19 BRCA TCGA-A8-A09X-01A 2 1 In-Frame Inter-chr p13.2 q11.21 76061 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR70-CACNA2D4 WDR70 chr5 37516692 - CACNA2D4 chr12 2019131 - Exonic hg19 BLCA TCGA-G2-A3VY-01A 10 6 Out-of-frame Inter-chr p13.2 p13.33 Seq+ 76062 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR70-GRAMD4 WDR70 chr5 37605340 - GRAMD4 chr22 47022648 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 3 5 Out-of-frame Inter-chr p13.2 q13.31 Seq+ 76063 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR70-PGAP3 WDR70 chr5 37480089 - PGAP3 chr17 37841002 - Exonic hg19 BRCA TCGA-A2-A0T1-01A 11 8 In-Frame Inter-chr p13.2 q12 Oncogene Seq+ 76064 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR70-PLCXD3 WDR70 chr5 37516692 - PLCXD3 chr5 41313872 - Exonic hg19 BRCA TCGA-AR-A0TW-01A 23 11 In-Frame Intra-chr p13.2 p13.1 Seq+ 76065 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR70-RAI14 WDR70 chr5 37516692 - RAI14 chr5 34796044 + Exonic hg19 PRAD TCGA-ZG-A9KY-01A 5 14 In-Frame Intra-chr p13.2 p13.2 Seq+ 76066 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR78-LRRC40 WDR78 chr1 67390345 - LRRC40 chr1 70654956 - Exonic hg19 BRCA TCGA-GM-A3XL-01A 6 1 Out-of-frame Intra-chr p31.3 p31.1 Seq+ 76067 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR81-CYB5D1 WDR81 chr17 1631920 - CYB5D1 chr17 7761721 + Exonic hg19 LUSC TCGA-96-A4JK-01A 2 2 In-Frame Intra-chr p13.1 76068 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR82-GLT8D1 WDR82 chr3 52318544 - GLT8D1 chr3 52734512 - Exonic hg19 UCS TCGA-N6-A4VG-01A 12 5 5'UTR-5'UTR Intra-chr p21.2 p21.1 Seq+ 76069 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR82-NT5DC2 WDR82 chr3 52321849 - NT5DC2 chr3 52563350 - Exonic hg19 HNSC TCGA-CN-4731-01A 26 8 5'UTR-CDS Intra-chr p21.2 p21.1 Seq+ 76070 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR82-UBE4B WDR82 chr3 52304728 - UBE4B chr1 10132086 + Exonic hg19 UCEC TCGA-A5-A7WK-01A 19 24 Out-of-frame Inter-chr p21.2 p36.22 Tumor suppressor gene Seq+ 76071 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR85-PPP2R4 WDR85 chr9 140468660 - PPP2R4 chr9 131885331 + Exonic hg19 BRCA TCGA-E2-A159-01A 12 16 Out-of-frame Intra-chr Tumor suppressor gene 76072 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR85-ZMYND19 WDR85 chr9 140468660 - ZMYND19 chr9 140481559 - Exonic hg19 CESC TCGA-C5-A1MJ-01A 6 1 Out-of-frame Intra-chr q34.3 Seq+ 76073 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR90-ESYT3 WDR90 chr16 712331 - ESYT3 chr3 138195065 + Exonic hg19 SARC TCGA-DX-A8BS-01A 2 2 In-Frame Inter-chr p13.3 q22.3 76074 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDR90-RAB40C WDR90 chr16 712059 - RAB40C chr16 667208 + Exonic hg19 LUAD TCGA-49-6744-01A 2 1 In-Frame Intra-chr p13.3 p13.3 76075 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDSUB1-BAZ2B WDSUB1 chr2 160136272 - BAZ2B chr2 160189197 - Exonic hg19 BRCA TCGA-BH-A18T-01A 7 6 Out-of-frame Intra-chr q24.2 q24.2 Transcription factor Seq+ 76076 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDSUB1-BAZ2B WDSUB1 chr2 160104883 - BAZ2B chr2 160269056 - Exonic hg19 LUSC TCGA-NC-A5HJ-01A 2 2 Out-of-frame Intra-chr q24.2 q24.2 Transcription factor Seq+ 76077 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDSUB1-FYTTD1 WDSUB1 chr2 160132057 - FYTTD1 chr3 197483297 + Exonic hg19 SARC TCGA-IE-A3OV-01A 19 5 In-Frame Inter-chr q24.2 q29 Seq+ 76078 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDSUB1-GPD2 WDSUB1 chr2 160104883 - GPD2 chr2 157332610 + Exonic hg19 BLCA TCGA-G2-A3VY-01A 5 2 CDS-5'UTR Intra-chr q24.2 q24.1 Seq+ 76079 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDTC1-FNBP1L WDTC1 chr1 27614352 - FNBP1L chr1 94000262 + Exonic hg19 PCPG TCGA-S7-A7WT-01A 7 11 Out-of-frame Intra-chr p36.11 p22.1 Seq+ 76080 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDTC1-TMEM39B WDTC1 chr1 27561442 - TMEM39B chr1 32540552 + Exonic hg19 HNSC TCGA-DQ-7591-01A 34 19 5'UTR-CDS Intra-chr p36.11 p35.2 Seq+ 76081 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDYHV1-ATAD2 WDYHV1 chr8 124429096 - ATAD2 chr8 124361684 - Exonic hg19 LUSC TCGA-63-A5MB-01A 2 1 In-Frame Intra-chr q24.13 q24.13 76082 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDYHV1-CDHR2 WDYHV1 chr8 124442273 - CDHR2 chr5 175992339 + Exonic hg19 BRCA TCGA-D8-A1Y0-01A 32 16 CDS-5'UTR Inter-chr q24.13 q35.2 Seq+ 76083 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WDYHV1-WISP2 WDYHV1 chr8 124429172 - WISP2 chr20 43355728 + Exonic hg19 BLCA TCGA-ZF-A9RF-01A 2 1 Out-of-frame Inter-chr q24.13 q13.12 76084 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WEE1-CHRNA3 WEE1 chr11 9608403 - CHRNA3 chr15 78894606 - Exonic hg19 CESC TCGA-C5-A7X3-01A 8 7 In-Frame Inter-chr p15.4 q25.1 Seq+ 76085 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WFDC2-PI3 WFDC2 chr20 44099172 - PI3 chr20 43804502 + Exonic hg19 BRCA TCGA-AQ-A54N-01A 157 97 In-Frame Intra-chr q13.12 q13.12 Seq+ 76086 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1-CPLX1 WHSC1 chr4 1920350 - CPLX1 chr4 786396 - Exonic hg19 LGG TCGA-DH-A669-01A 216 85 Out-of-frame Intra-chr Oncogene p16.3 Seq+ 76087 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1-CPLX1 WHSC1 chr4 1920350 - CPLX1 chr4 786396 - Exonic hg19 LGG TCGA-DH-A669-02A 107 50 Out-of-frame Intra-chr Oncogene p16.3 Seq+ 76088 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1-FAM53A WHSC1 chr4 1957915 - FAM53A chr4 1619838 - Exonic hg19 LUAD TCGA-38-4630-01A 45 43 Out-of-frame Intra-chr Oncogene p16.3 Seq+ 76089 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1-GSDMB WHSC1 chr4 1957915 - GSDMB chr17 38068750 - Exonic hg19 LUAD TCGA-38-4630-01A 42 45 In-Frame Inter-chr Oncogene q21.1 Seq+ 76090 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1-NUP210L WHSC1 chr4 1902978 - NUP210L chr1 153984846 - Exonic hg19 UCS TCGA-N5-A4RA-01A 31 6 In-Frame Inter-chr Oncogene q21.3 Seq+ 76091 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1-PHTF2 WHSC1 chr4 1902978 - PHTF2 chr7 77522925 + Exonic hg19 HNSC TCGA-HD-8224-01A 41 14 In-Frame Inter-chr Oncogene q11.23 76092 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1-PIBF1 WHSC1 chr4 1873269 - PIBF1 chr13 73539412 + Exonic hg19 HNSC TCGA-HD-7753-01A 130 165 5'UTR-CDS Inter-chr Oncogene q21.33 Seq+ 76093 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1-QKI WHSC1 chr4 1959763 - QKI chr6 163876311 + Exonic hg19 LGG TCGA-WY-A859-01A 2 3 Out-of-frame Inter-chr Oncogene q26 76094 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1-TACC3 WHSC1 chr4 1906105 - TACC3 chr4 1742553 + Exonic hg19 BRCA TCGA-BH-A1FD-01A 30 19 In-Frame Intra-chr Oncogene p16.3 Seq+ 76095 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1L1-ADAM18 WHSC1L1 chr8 38137058 - ADAM18 chr8 39587417 + Exonic hg19 COAD TCGA-D5-6926-01A 70 120 Out-of-frame Intra-chr p11.23 Tumor suppressor gene Seq+ 76096 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1L1-ADAM32 WHSC1L1 chr8 38138985 - ADAM32 chr8 39131831 + Exonic hg19 BRCA TCGA-EW-A1PH-01A 85 59 Out-of-frame Intra-chr p11.23 Tumor suppressor gene Seq+ 76097 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1L1-ANK1 WHSC1L1 chr8 38205015 - ANK1 chr8 41615655 - Exonic hg19 BRCA TCGA-E2-A15A-01A 157 100 In-Frame Intra-chr p11.23 Tumor suppressor gene p11.21 Seq+ 76098 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1L1-C15orf55 WHSC1L1 chr8 38184248 - C15orf55 chr15 34640170 + Exonic hg19 LUSC TCGA-60-2716-01A 93 53 In-Frame Inter-chr p11.23 Tumor suppressor gene Seq+ 76099 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1L1-CSMD1 WHSC1L1 chr8 38172165 - CSMD1 chr8 2796266 - Exonic hg19 BRCA TCGA-BH-A1ES-01A 6 2 Out-of-frame Intra-chr p11.23 Tumor suppressor gene p23.2 Tumor suppressor gene Seq+ 76100 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1L1-CSMD1 WHSC1L1 chr8 38172165 - CSMD1 chr8 2796266 - Exonic hg19 BRCA TCGA-BH-A1ES-06A 5 5 Out-of-frame Intra-chr p11.23 Tumor suppressor gene p23.2 Tumor suppressor gene Seq+ 76101 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1L1-DDHD2 WHSC1L1 chr8 38178590 - DDHD2 chr8 38095607 + Exonic hg19 LUSC TCGA-63-A5MP-01A 19 15 In-Frame Intra-chr p11.23 Tumor suppressor gene p11.23 Seq+ 76102 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1L1-DDHD2 WHSC1L1 chr8 38172165 - DDHD2 chr8 38090505 + Exonic hg19 PAAD TCGA-PZ-A5RE-01A 10 4 CDS-5'UTR Intra-chr p11.23 Tumor suppressor gene p11.23 Seq+ 76103 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1L1-DUSP26 WHSC1L1 chr8 38162105 - DUSP26 chr8 33455109 - Exonic hg19 OV TCGA-24-1604-01A 6 1 CDS-5'UTR Intra-chr p11.23 Tumor suppressor gene p12 Tumor suppressor gene Seq+ 76104 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1L1-FGFR1 WHSC1L1 chr8 38239317 - FGFR1 chr8 38315052 - Exonic hg19 LUAD TCGA-44-4112-01A 4 1 5'UTR-5'UTR Intra-chr p11.23 Tumor suppressor gene p11.23 TK:FGFR Oncogene Seq+ 76105 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1L1-FGFR1 WHSC1L1 chr8 38162105 - FGFR1 chr8 38285611 - Exonic hg19 BRCA TCGA-C8-A26X-01A 2 4 In-Frame Intra-chr p11.23 Tumor suppressor gene p11.23 TK:FGFR Oncogene Seq+ 76106 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1L1-FGFR1 WHSC1L1 chr8 38239317 - FGFR1 chr8 38315052 - Exonic hg19 BRCA TCGA-E2-A15A-01A 60 47 5'UTR-5'UTR Intra-chr p11.23 Tumor suppressor gene p11.23 TK:FGFR Oncogene Seq+ 76107 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1L1-FGFR1 WHSC1L1 chr8 38239317 - FGFR1 chr8 38315052 - Exonic hg19 BRCA TCGA-E2-A15A-06A 22 22 5'UTR-5'UTR Intra-chr p11.23 Tumor suppressor gene p11.23 TK:FGFR Oncogene Seq+ 76108 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1L1-GAB2 WHSC1L1 chr8 38239317 - GAB2 chr11 77991947 - Exonic hg19 BRCA TCGA-AO-A1KT-01A 41 46 5'UTR-5'UTR Inter-chr p11.23 Tumor suppressor gene q14.1 Seq+ 76109 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1L1-LETM2 WHSC1L1 chr8 38239317 - LETM2 chr8 38245468 + Exonic hg19 HNSC TCGA-D6-A4Z9-01A 3 1 5'UTR-5'UTR Intra-chr p11.23 Tumor suppressor gene p11.23 Seq+ 76110 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1L1-MUCL1 WHSC1L1 chr8 38239317 - MUCL1 chr12 55248900 + Exonic hg19 OV TCGA-29-1702-01A 9 31 5'UTR-CDS Inter-chr p11.23 Tumor suppressor gene q13.2 Seq+ 76111 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1L1-NEGR1 WHSC1L1 chr8 38239317 - NEGR1 chr1 72241980 - Exonic hg19 BRCA TCGA-EW-A2FR-01A 3 6 5'UTR-CDS Inter-chr p11.23 Tumor suppressor gene p31.1 76112 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1L1-PLEKHA2 WHSC1L1 chr8 38146005 - PLEKHA2 chr8 38826939 + Exonic hg19 BRCA TCGA-OL-A66J-01A 5 4 In-Frame Intra-chr p11.23 Tumor suppressor gene p11.22 Seq+ 76113 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1L1-PSD3 WHSC1L1 chr8 38146005 - PSD3 chr8 18513195 - Exonic hg19 BRCA TCGA-BH-A18U-01A 208 142 In-Frame Intra-chr p11.23 Tumor suppressor gene p22 Seq+ 76114 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1L1-PURG WHSC1L1 chr8 38239317 - PURG chr8 30854213 - Exonic hg19 UCS TCGA-N5-A4RO-01A 3 3 5'UTR-CDS Intra-chr p11.23 Tumor suppressor gene p12 Transcription factor 76115 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1L1-SNX20 WHSC1L1 chr8 38239317 - SNX20 chr16 50711446 - Exonic hg19 BRCA TCGA-BH-A1FB-01A 29 44 5'UTR-5'UTR Inter-chr p11.23 Tumor suppressor gene q12.1 Seq+ 76116 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1L1-TACC1 WHSC1L1 chr8 38176413 - TACC1 chr8 38705473 + Exonic hg19 LUSC TCGA-77-8143-01A 12 5 Out-of-frame Intra-chr p11.23 Tumor suppressor gene p11.22 Seq+ 76117 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1L1-ZMAT4 WHSC1L1 chr8 38172165 - ZMAT4 chr8 40389757 - Exonic hg19 BRCA TCGA-EW-A1IX-01A 177 76 Out-of-frame Intra-chr p11.23 Tumor suppressor gene p11.21 Transcription factor Seq+ 76118 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WHSC1L1-ZNF721 WHSC1L1 chr8 38239317 - ZNF721 chr4 438221 - Exonic hg19 LIHC TCGA-G3-A25X-01A 4 1 5'UTR-CDS Inter-chr p11.23 Tumor suppressor gene p16.3 Transcription factor 76119 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WIBG-SLC16A7 WIBG chr12 56297171 - SLC16A7 chr12 60173204 + Exonic hg19 ACC TCGA-OR-A5KT-01A 66 35 Out-of-frame Intra-chr 12q13.2 q14.1 Seq+ 76120 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WIPF2-CDC42EP4 WIPF2 chr17 38375744 - CDC42EP4 chr17 71282751 - Exonic hg19 LUAD TCGA-44-A47B-01A 4 1 5'UTR-5'UTR Intra-chr q21.2 q25.1 76121 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WIPF2-DBF4B WIPF2 chr17 38375744 - DBF4B chr17 42800248 + Exonic hg19 CESC TCGA-VS-A9UP-01A 18 5 5'UTR-5'UTR Intra-chr q21.2 q21.31 76122 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WIPF2-EZH1 WIPF2 chr17 38421398 - EZH1 chr17 40882936 - Exonic hg19 BRCA TCGA-A8-A09I-01A 6 6 CDS-5'UTR Intra-chr q21.2 q21.2 Tumor suppressor gene Seq+ 76123 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WIPF2-IL2RB WIPF2 chr17 38375744 - IL2RB chr22 37540245 - Exonic hg19 BRCA TCGA-C8-A132-01A 457 365 5'UTR-5'UTR Inter-chr q21.2 q12.3 Seq+ 76124 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WIPF2-LRRC3C WIPF2 chr17 38375744 - LRRC3C chr17 38100186 + Exonic hg19 BRCA TCGA-B6-A0I1-01A 2 3 5'UTR-CDS Intra-chr q21.2 q21.1 76125 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WIPF2-MRPL45 WIPF2 chr17 38433436 - MRPL45 chr17 36476502 + Exonic hg19 SARC TCGA-QQ-A5VB-01A 2 2 Out-of-frame Intra-chr q21.2 q12 76126 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WIPF2-MSL1 WIPF2 chr17 38375744 - MSL1 chr17 38282436 + Exonic hg19 BLCA TCGA-K4-A3WV-01A 11 5 5'UTR-5'UTR Intra-chr q21.2 q21.1 Seq+ 76127 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WIPF2-PSMD11 WIPF2 chr17 38430251 - PSMD11 chr17 30806269 + Exonic hg19 BRCA TCGA-E9-A228-01A 42 30 Out-of-frame Intra-chr q21.2 q11.2 Seq+ 76128 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WIPF2-PSMD3 WIPF2 chr17 38375744 - PSMD3 chr17 38144936 + Exonic hg19 STAD TCGA-BR-8289-01A 44 183 5'UTR-CDS Intra-chr q21.2 q21.1 Seq+ 76129 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WIPF2-RAMP2 WIPF2 chr17 38375744 - RAMP2 chr17 40913852 + Exonic hg19 PRAD TCGA-2A-A8W3-01A 20 3 5'UTR-CDS Intra-chr q21.2 q21.2 Seq+ 76130 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WIPF2-RAPGEFL1 WIPF2 chr17 38375744 - RAPGEFL1 chr17 38337868 + Exonic hg19 KIRC TCGA-CJ-4923-01A 7 4 5'UTR-5'UTR Intra-chr q21.2 q21.1 Seq+ 76131 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WIPF2-SEZ6 WIPF2 chr17 38375744 - SEZ6 chr17 27309057 - Exonic hg19 BRCA TCGA-AN-A0FV-01A 20 8 5'UTR-CDS Intra-chr q21.2 q11.2 Seq+ 76132 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WIPF2-STARD3 WIPF2 chr17 38421398 - STARD3 chr17 37809734 + Exonic hg19 UCS TCGA-N5-A59E-01A 4 3 CDS-5'UTR Intra-chr q21.2 q12 Seq+ 76133 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WIPF2-THRA WIPF2 chr17 38375744 - THRA chr17 38230445 + Exonic hg19 STAD TCGA-D7-8573-01A 7 30 5'UTR-5'UTR Intra-chr q21.2 q21.1 Tumor suppressor gene Transcription factor Seq+ 76134 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WIPF2-USP32 WIPF2 chr17 38375744 - USP32 chr17 58422969 - Exonic hg19 BRCA TCGA-BH-A18R-01A 23 10 5'UTR-CDS Intra-chr q21.2 q23.2 Seq+ 76135 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WIPF2-XYLT2 WIPF2 chr17 38375744 - XYLT2 chr17 48430991 + Exonic hg19 UCS TCGA-N8-A4PM-01A 4 1 5'UTR-CDS Intra-chr q21.2 q21.33 Seq+ 76136 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WIPF2-ZPBP2 WIPF2 chr17 38375744 - ZPBP2 chr17 38027717 + Exonic hg19 ACC TCGA-OR-A5JP-01A 7 1 5'UTR-CDS Intra-chr q21.2 q21.1 76137 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WIPI1-AC040934.1 WIPI1 chr17 66429609 - AC040934.1 chr17 45534159 - Exonic hg19 BRCA TCGA-BH-A1FM-01A 6 9 Out-of-frame Intra-chr q24.2 q21.32 76138 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WIZ-CYP4F3 WIZ chr19 15558914 - CYP4F3 chr19 15752225 + Exonic hg19 BRCA TCGA-AC-A5XU-01A 2 1 CDS-5'UTR Intra-chr p13.12 Transcription factor p13.12 76139 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WLS-TBX3 WLS chr1 68603463 - TBX3 chr12 115110107 - Exonic hg19 PRAD TCGA-EJ-5525-01A 7 10 Out-of-frame Inter-chr p31.3 q24.21 Transcription factor Seq+ 76140 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WNK1-B4GALNT3 WNK1 chr12 863490 - B4GALNT3 chr12 644332 + Exonic hg19 LUAD TCGA-91-7771-01A 3 1 Out-of-frame Intra-chr p13.33 p13.33 KB Pub Seq+ 76141 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WNK1-B4GALNT3 WNK1 chr12 939326 - B4GALNT3 chr12 657397 + Exonic hg19 LIHC TCGA-BC-A8YO-01A 32 33 In-Frame Intra-chr p13.33 p13.33 KB Pub Seq+ 76142 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WNK1-CCDC77 WNK1 chr12 863490 - CCDC77 chr12 541032 + Exonic hg19 LUAD TCGA-78-7159-01A 2 1 Out-of-frame Intra-chr p13.33 p13.33 76143 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WNK1-DUSP16 WNK1 chr12 863490 - DUSP16 chr12 12640121 - Exonic hg19 LUSC TCGA-98-A53I-01A 3 2 In-Frame Intra-chr p13.33 76144 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WNK1-GIPC1 WNK1 chr12 863490 - GIPC1 chr19 14603724 - Exonic hg19 UCEC TCGA-D1-A3JQ-01A 15 13 CDS-5'UTR Inter-chr p13.33 p13.12 Seq+ 76145 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WNK1-IQSEC3 WNK1 chr12 863490 - IQSEC3 chr12 247433 + Exonic hg19 OV TCGA-24-0970-01B 4 3 In-Frame Intra-chr p13.33 Seq+ 76146 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WNK1-KDM4B WNK1 chr12 863490 - KDM4B chr19 5016268 + Exonic hg19 HNSC TCGA-P3-A6T8-01A 3 3 CDS-5'UTR Inter-chr p13.33 p13.3 Seq+ 76147 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WNK1-KDM5A WNK1 chr12 939326 - KDM5A chr12 432947 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 14 2 In-Frame Intra-chr p13.33 p13.33 Tumor suppressor gene Seq+ 76148 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WNK1-PIP4K2C WNK1 chr12 966415 - PIP4K2C chr12 57995309 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 113 59 Out-of-frame Intra-chr p13.33 q13.3 Seq+ 76149 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WNK1-PRMT8 WNK1 chr12 971436 - PRMT8 chr12 3649772 + Exonic hg19 BRCA TCGA-BH-A18T-01A 12 9 In-Frame Intra-chr p13.33 p13.32 Seq+ 76150 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WNK1-RAD52 WNK1 chr12 998389 - RAD52 chr12 1042242 - Exonic hg19 LUAD TCGA-86-8585-01A 13 3 CDS-5'UTR Intra-chr p13.33 p13.33 Seq+ 76151 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WNK1-STK38L WNK1 chr12 863490 - STK38L chr12 27455070 + Exonic hg19 LGG TCGA-DU-7007-01A 27 14 Out-of-frame Intra-chr p13.33 p11.23 Seq+ 76152 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WNK2-C9orf89 WNK2 chr9 96052329 - C9orf89 chr9 95869956 + Exonic hg19 LIHC TCGA-BC-A10R-01A 7 2 In-Frame Intra-chr q22.31 Tumor suppressor gene 76153 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WNK2-CENPP WNK2 chr9 96070866 - CENPP chr9 95373596 + Exonic hg19 UCS TCGA-NF-A4WU-01A 10 4 In-Frame Intra-chr q22.31 Tumor suppressor gene q22.31 Seq+ 76154 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WNK2-SECISBP2 WNK2 chr9 96026315 - SECISBP2 chr9 91972326 + Exonic hg19 LUSC TCGA-22-5483-01A 2 3 Out-of-frame Intra-chr q22.31 Tumor suppressor gene q22.2 Seq+ 76155 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WNK2-SUSD3 WNK2 chr9 96031028 - SUSD3 chr9 95838066 + Exonic hg19 ESCA TCGA-L5-A8NI-01A 2 32 In-Frame Intra-chr q22.31 Tumor suppressor gene q22.31 Seq+ 76156 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WNK3-FGD1 WNK3 chrX 54359570 - FGD1 chrX 54497920 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 2 2 Out-of-frame Intra-chr p11.22 p11.22 76157 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WNT11-TSPAN8 WNT11 chr11 75917369 - TSPAN8 chr12 71551567 - Exonic hg19 BRCA TCGA-A1-A0SJ-01A 11 13 CDS-5'UTR Inter-chr q13.5 Tumor suppressor gene q21.1 Seq+ 76158 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WNT2-ASZ1 WNT2 chr7 116962961 - ASZ1 chr7 117066989 - Exonic hg19 LGG TCGA-HT-A61C-01A 181 73 Out-of-frame Intra-chr q31.2 q31.2 Seq+ 76159 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WNT5B-NINJ2 WNT5B chr12 1640116 - NINJ2 chr12 675344 - Exonic hg19 LUSC TCGA-39-5036-01A 3 3 5'UTR-CDS Intra-chr p13.33 p13.33 Seq+ 76160 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WNT7B-DGCR8 WNT7B chr22 46345800 - DGCR8 chr22 20093700 + Exonic hg19 LUAD TCGA-97-A4M3-01A 4 3 Out-of-frame Intra-chr q13.31 q11.21 Seq+ 76161 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WNT7B-LRP6 WNT7B chr22 46372564 - LRP6 chr12 12334373 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 2 3 Out-of-frame Inter-chr q13.31 76162 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WRAP53-AHCY WRAP53 chr17 7593019 - AHCY chr20 32868971 - Exonic hg19 ACC TCGA-OR-A5LO-01A 10 9 In-Frame Inter-chr p13.1 q11.22 Seq+ 76163 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WRB-ERG WRB chr21 40752412 - ERG chr21 39817544 - Exonic hg19 PAAD TCGA-3E-AAAY-01A 12 6 In-Frame Intra-chr q22.2 q22.2 Oncogene Transcription factor Seq+ 76164 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WRB-KCNJ15 WRB chr21 40782863 - KCNJ15 chr21 39668848 + Exonic hg19 LUAD TCGA-50-5944-01A 8 1 3'UTR-5'UTR Intra-chr q22.2 q22.13 Seq+ 76165 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WRB-NLK WRB chr21 40752412 - NLK chr17 26490569 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 22 19 Out-of-frame Inter-chr q22.2 q11.2 CMGC:MAPK Seq+ 76166 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WRN-ADAM9 WRN chr8 30982516 - ADAM9 chr8 38871484 + Exonic hg19 BRCA TCGA-B6-A0I1-01A 4 4 In-Frame Intra-chr p12 Oncogene Seq+ 76167 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WRN-LETM2 WRN chr8 30891489 - LETM2 chr8 38245468 + Exonic hg19 UCS TCGA-N5-A4RO-01A 5 1 5'UTR-5'UTR Intra-chr p12 Oncogene p11.23 Seq+ 76168 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WRN-NRG1 WRN chr8 31024746 - NRG1 chr8 32585467 + Exonic hg19 LIHC TCGA-DD-AAD0-01A 2 5 Out-of-frame Intra-chr p12 Oncogene p12 Seq+ 76169 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WRNIP1-SERPINB6 WRNIP1 chr6 2770595 - SERPINB6 chr6 2959576 - Exonic hg19 SKCM TCGA-EB-A85J-01A 2 7 CDS-5'UTR Intra-chr p25.2 p25.2 Seq+ 76170 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WSB1-FN3KRP WSB1 chr17 25621461 - FN3KRP chr17 80676782 + Exonic hg19 LUAD TCGA-44-A47B-01A 31 24 Out-of-frame Intra-chr q11.1 q25.3 Seq+ 76171 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WSB1-MED1 WSB1 chr17 25621461 - MED1 chr17 37576171 - Exonic hg19 GBM TCGA-27-2524-01A 4 6 Out-of-frame Intra-chr q11.1 q12 Tumor suppressor gene Seq+ 76172 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WSB1-NBR1 WSB1 chr17 25621461 - NBR1 chr17 41327808 + Exonic hg19 LAML TCGA-AB-2920-03B 4 11 CDS-5'UTR Intra-chr q11.1 q21.31 Seq+ 76173 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WSB2-RFC5 WSB2 chr12 118480646 - RFC5 chr12 118467576 + Exonic hg19 LUAD TCGA-91-7771-01A 3 1 In-Frame Intra-chr q24.23 q24.23 Seq+ 76174 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WSB2-VSIG10 WSB2 chr12 118490115 - VSIG10 chr12 118520234 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 41 23 Out-of-frame Intra-chr q24.23 q24.23 Seq+ 76175 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WSCD1-NLRP1 WSCD1 chr17 5998543 - NLRP1 chr17 5405192 - Exonic hg19 KIRC TCGA-CJ-5684-01A 5 5 Out-of-frame Intra-chr p13.2 p13.2 Oncogene Seq+ 76176 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WSCD1-NLRP1 WSCD1 chr17 5998543 - NLRP1 chr17 5405192 - Exonic hg19 KIRC TCGA-CW-5590-01A 182 86 Out-of-frame Intra-chr p13.2 p13.2 Oncogene Seq+ 76177 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WTAP-SOCS2 WTAP chr6 160160077 - SOCS2 chr12 93966461 + Exonic hg19 PRAD TCGA-EJ-5515-01A 8 2 CDS-5'UTR Inter-chr q25.3 q22 Seq+ 76178 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WTIP-KIAA0355 WTIP chr19 34984527 - KIAA0355 chr19 34790584 + Exonic hg19 BRCA TCGA-AN-A0FW-01A 4 1 CDS-5'UTR Intra-chr q13.11 Seq+ 76179 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWC1-FMN2 WWC1 chr5 167798538 - FMN2 chr1 240341221 + Exonic hg19 PRAD TCGA-2A-A8VX-01A 21 16 Out-of-frame Inter-chr q34 q43 Seq+ 76180 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWC1-ODZ2 WWC1 chr5 167719276 - ODZ2 chr5 167589616 + Exonic hg19 OV TCGA-13-1483-01A 2 3 Out-of-frame Intra-chr q34 76181 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWC1-ODZ2 WWC1 chr5 167719276 - ODZ2 chr5 167302991 + Exonic hg19 BRCA TCGA-B6-A0X1-01A 6 8 Out-of-frame Intra-chr q34 76182 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWC1-ODZ2 WWC1 chr5 167719276 - ODZ2 chr5 167689054 + Exonic hg19 UCEC TCGA-PG-A5BC-01A 10 7 Out-of-frame Intra-chr q34 76183 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWC1-SNTG2 WWC1 chr5 167841595 - SNTG2 chr2 1161234 + Exonic hg19 PRAD TCGA-J4-A83J-01A 31 23 Out-of-frame Inter-chr q34 Seq+ 76184 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWC2-CCDC110 WWC2 chr4 184020775 - CCDC110 chr4 186392203 - Exonic hg19 HNSC TCGA-H7-A6C4-01A 7 3 Out-of-frame Intra-chr q35.1 q35.1 Seq+ 76185 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWC3-SHROOM2 WWC3 chrX 10102636 - SHROOM2 chrX 9841692 + Exonic hg19 STAD TCGA-BR-4357-01A 10 5 In-Frame Intra-chr p22.2 p22.2 76186 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWOX-C15orf41 WWOX chr16 78198186 - C15orf41 chr15 37100525 + Exonic hg19 GBM TCGA-06-5415-01A 3 3 Out-of-frame Inter-chr q23.1 Tumor suppressor gene q14 Seq+ 76187 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWOX-VAT1L WWOX chr16 78198186 - VAT1L chr16 78005747 + Exonic hg19 COAD TCGA-A6-4105-01A 11 2 In-Frame Intra-chr q23.1 Tumor suppressor gene q23.1 Seq+ 76188 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWOX-VAT1L WWOX chr16 78133782 - VAT1L chr16 77850818 + Exonic hg19 STAD TCGA-CD-8535-01A 3 43 In-Frame Intra-chr q23.1 Tumor suppressor gene q23.1 Seq+ 76189 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWP1-CPB2 WWP1 chr8 87474075 - CPB2 chr13 46661955 - Exonic hg19 BRCA TCGA-E2-A1LG-01A 26 54 In-Frame Inter-chr q21.3 q14.13 Seq+ 76190 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWP1-ESRP1 WWP1 chr8 87355159 - ESRP1 chr8 95674729 + Exonic hg19 SKCM TCGA-D3-A1Q4-06A 25 19 5'UTR-CDS Intra-chr q21.3 q22.1 Tumor suppressor gene Seq+ 76191 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWP1-LRRCC1 WWP1 chr8 87355159 - LRRCC1 chr8 86053617 + Exonic hg19 LIHC TCGA-EP-A2KA-01A 10 25 5'UTR-CDS Intra-chr q21.3 q21.2 Seq+ 76192 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWP1-NUBPL WWP1 chr8 87393858 - NUBPL chr14 32295835 + Exonic hg19 BRCA TCGA-E9-A22A-01A 23 12 In-Frame Inter-chr q21.3 q12 Seq+ 76193 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWP1-UTP23 WWP1 chr8 87443972 - UTP23 chr8 117783695 + Exonic hg19 SARC TCGA-DX-A3M1-01A 13 9 Out-of-frame Intra-chr q21.3 q24.11 Seq+ 76194 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWP1-ZNF704 WWP1 chr8 87414432 - ZNF704 chr8 81733850 - Exonic hg19 SKCM TCGA-EE-A2MH-06A 4 5 CDS-5'UTR Intra-chr q21.3 q21.13 Transcription factor Seq+ 76195 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWP2-CYB5B WWP2 chr16 69833198 - CYB5B chr16 69481053 + Exonic hg19 LUAD TCGA-55-A48Y-01A 11 12 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 76196 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWP2-GSG1L WWP2 chr16 69833198 - GSG1L chr16 27856382 - Exonic hg19 ESCA TCGA-LN-A8HZ-01A 4 16 In-Frame Intra-chr q22.1 p12.1 Seq+ 76197 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWP2-NFAT5 WWP2 chr16 69876023 - NFAT5 chr16 69660306 + Exonic hg19 STAD TCGA-BR-8373-01A 3 17 Out-of-frame Intra-chr q22.1 q22.1 Transcription factor Seq+ 76198 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWP2-NHP2L1 WWP2 chr16 69876023 - NHP2L1 chr22 42076368 - Exonic hg19 UCEC TCGA-AJ-A3EJ-01A 20 4 Out-of-frame Inter-chr q22.1 Seq+ 76199 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWP2-TMCO7 WWP2 chr16 69820983 - TMCO7 chr16 69007931 + Exonic hg19 OV TCGA-24-2026-01A 3 8 In-Frame Intra-chr q22.1 Seq+ 76200 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWP2-TMCO7 WWP2 chr16 69922152 - TMCO7 chr16 68936231 + Exonic hg19 LUSC TCGA-94-7557-01A 39 45 In-Frame Intra-chr q22.1 Seq+ 76201 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWP2-TMCO7 WWP2 chr16 69876023 - TMCO7 chr16 69056731 + Exonic hg19 UCEC TCGA-AX-A3FV-01A 7 8 Out-of-frame Intra-chr q22.1 Seq+ 76202 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWP2-TSEN54 WWP2 chr16 69820983 - TSEN54 chr17 73517490 + Exonic hg19 BRCA TCGA-AR-A256-01A 12 6 Out-of-frame Inter-chr q22.1 q25.1 Seq+ 76203 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWP2-ZNF629 WWP2 chr16 69820983 - ZNF629 chr16 30795836 - Exonic hg19 SKCM TCGA-ER-A196-01A 2 1 5'UTR-5'UTR Intra-chr q22.1 p11.2 Transcription factor Seq+ 76204 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWTR1-ANKUB1 WWTR1 chr3 149374663 - ANKUB1 chr3 149479400 - Exonic hg19 LUAD TCGA-55-A493-01A 4 2 In-Frame Intra-chr q25.1 q25.1 Seq+ 76205 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWTR1-ATR WWTR1 chr3 149374663 - ATR chr3 142168444 - Exonic hg19 PRAD TCGA-VN-A88M-01A 60 68 CDS-3'UTR Intra-chr q25.1 q23 Atypical:PIKK Oncogene Tumor suppressor gene Seq+ 76206 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq WWTR1-ESRRG WWTR1 chr3 149290651 - ESRRG chr1 216741440 - Exonic hg19 SKCM TCGA-WE-AAA4-06A 2 1 In-Frame Inter-chr q25.1 q41 Transcription factor 76207 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XBP1-CCT5 XBP1 chr22 29190549 - CCT5 chr5 10250033 + Exonic hg19 PRAD TCGA-HC-7736-01A 2 14 Out-of-frame Inter-chr q12.1 Transcription factor p15.2 76208 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XBP1-KLK2 XBP1 chr22 29190549 - KLK2 chr19 51376695 + Exonic hg19 PRAD TCGA-G9-6348-01A 2 1 Out-of-frame Inter-chr q12.1 Transcription factor q13.33 76209 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XBP1-UTRN XBP1 chr22 29190549 - UTRN chr6 144665237 + Exonic hg19 LUAD TCGA-86-6851-01A 2 6 Out-of-frame Inter-chr q12.1 Transcription factor q24.2 76210 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XKR6-HOOK3 XKR6 chr8 11058085 - HOOK3 chr8 42821616 + Exonic hg19 STAD TCGA-VQ-AA6J-01A 3 32 In-Frame Intra-chr p23.1 p11.21 Oncogene Seq+ 76211 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPA-CORO2A XPA chr9 100449378 - CORO2A chr9 100919942 - Exonic hg19 LUSC TCGA-96-A4JK-01A 5 3 CDS-5'UTR Intra-chr q22.33 Oncogene Transcription factor q22.33 Seq+ 76212 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPC-DAG1 XPC chr3 14219966 - DAG1 chr3 49547852 + Exonic hg19 SARC TCGA-HS-A5N9-01A 37 14 CDS-5'UTR Intra-chr p25.1 Oncogene p21.31 Seq+ 76213 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPC-RCOR1 XPC chr3 14209757 - RCOR1 chr14 103177272 + Exonic hg19 BRCA TCGA-A8-A06Q-01A 51 38 In-Frame Inter-chr p25.1 Oncogene q32.31 Seq+ 76214 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPNPEP1-FAM13B XPNPEP1 chr10 111674769 - FAM13B chr5 137298158 - Exonic hg19 SARC TCGA-WP-A9GB-01A 4 8 Out-of-frame Inter-chr q25.1 q31.2 Seq+ 76215 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPNPEP3-C22orf28 XPNPEP3 chr22 41282519 - C22orf28 chr22 32784086 - Exonic hg19 LUAD TCGA-69-7761-01A 17 4 In-Frame Intra-chr q13.2 Seq+ 76216 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPO1-C2orf74 XPO1 chr2 61749746 - C2orf74 chr2 61389977 + Exonic hg19 BLCA TCGA-XF-A8HH-01A 7 2 Out-of-frame Intra-chr p15 Oncogene p15 Seq+ 76217 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPO1-HORMAD1 XPO1 chr2 61725808 - HORMAD1 chr1 150692014 - Exonic hg19 BRCA TCGA-E9-A22D-01A 38 23 CDS-5'UTR Inter-chr p15 Oncogene q21.3 Seq+ 76218 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPO4-ATP5SL XPO4 chr13 21381596 - ATP5SL chr19 41985192 - Exonic hg19 SARC TCGA-IE-A4EH-01A 4 2 CDS-5'UTR Inter-chr q12.11 q13.2 76219 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPO4-SSRP1 XPO4 chr13 21476809 - SSRP1 chr11 57102122 - Exonic hg19 STAD TCGA-CG-4477-01A 14 11 In-Frame Inter-chr q12.11 q12.1 76220 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPO4-ZDHHC20 XPO4 chr13 21429766 - ZDHHC20 chr13 21987911 - Exonic hg19 STAD TCGA-BR-4357-01A 2 3 In-Frame Intra-chr q12.11 q12.11 76221 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPO5-EYS XPO5 chr6 43514308 - EYS chr6 64436573 - Exonic hg19 LIHC TCGA-BC-A10T-01A 3 3 Out-of-frame Intra-chr p21.1 Tumor suppressor gene q12 Seq+ 76222 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPO5-KIF6 XPO5 chr6 43540243 - KIF6 chr6 39314302 - Exonic hg19 PRAD TCGA-V1-A9O9-01A 4 6 Out-of-frame Intra-chr p21.1 Tumor suppressor gene p21.2 Seq+ 76223 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPO5-MRPS10 XPO5 chr6 43515345 - MRPS10 chr6 42179655 - Exonic hg19 KIRC TCGA-A3-3313-01A 243 245 In-Frame Intra-chr p21.1 Tumor suppressor gene p21.1 Seq+ 76224 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPO5-VARS XPO5 chr6 43492845 - VARS chr6 31747591 - Exonic hg19 ESCA TCGA-R6-A8W5-01B 5 67 In-Frame Intra-chr p21.1 Tumor suppressor gene Seq+ 76225 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPO6-FBXO31 XPO6 chr16 28222687 - FBXO31 chr16 87393972 - Exonic hg19 BLCA TCGA-E5-A4TZ-01A 9 7 Out-of-frame Intra-chr p12.1 q24.2 Tumor suppressor gene Seq+ 76226 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPO6-LRRC48 XPO6 chr16 28163980 - LRRC48 chr17 17877166 + Exonic hg19 BLCA TCGA-H4-A2HQ-01A 6 7 CDS-5'UTR Inter-chr p12.1 76227 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPO7-ETV4 XPO7 chr8 21837714 - ETV4 chr17 41613847 - Exonic hg19 LUAD TCGA-73-4659-01A 6 3 Out-of-frame Inter-chr p21.3 q21.31 Oncogene Transcription factor Seq+ 76228 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPOT-C12orf56 XPOT chr12 64803875 - C12orf56 chr12 64746836 - Exonic hg19 OV TCGA-09-2051-01A 3 10 In-Frame Intra-chr q14.2 q14.2 Seq+ 76229 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPR1-ARHGEF11 XPR1 chr1 180651547 - ARHGEF11 chr1 156955965 - Exonic hg19 BLCA TCGA-K4-A3WU-01B 2 1 Out-of-frame Intra-chr q25.3 q23.1 76230 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPR1-DEDD XPR1 chr1 180651547 - DEDD chr1 161094316 - Exonic hg19 BLCA TCGA-DK-AA75-01A 2 8 CDS-5'UTR Intra-chr q25.3 q23.3 Seq+ 76231 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPR1-FAM5C XPR1 chr1 180651547 - FAM5C chr1 190203607 - Exonic hg19 BRCA TCGA-OL-A5D7-01A 6 1 Out-of-frame Intra-chr q25.3 76232 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPR1-KIFAP3 XPR1 chr1 180601406 - KIFAP3 chr1 170007572 - Exonic hg19 BRCA TCGA-OL-A5D8-01A 5 3 In-Frame Intra-chr q25.3 q24.2 76233 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPR1-LHX4 XPR1 chr1 180805852 - LHX4 chr1 180217420 + Exonic hg19 UCEC TCGA-D1-A3DG-01A 21 9 In-Frame Intra-chr q25.3 q25.2 Tumor suppressor gene Transcription factor Seq+ 76234 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPR1-NCF2 XPR1 chr1 180651547 - NCF2 chr1 183546842 - Exonic hg19 SKCM TCGA-FS-A1ZD-06A 14 7 Out-of-frame Intra-chr q25.3 q25.3 76235 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPR1-NME7 XPR1 chr1 180601406 - NME7 chr1 169138792 - Exonic hg19 LIHC TCGA-G3-A25U-01A 192 126 In-Frame Intra-chr q25.3 q24.2 Seq+ 76236 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPR1-RFWD2 XPR1 chr1 180843078 - RFWD2 chr1 176153828 - Exonic hg19 BRCA TCGA-A8-A07W-01A 3 1 In-Frame Intra-chr q25.3 q25.2 Tumor suppressor gene 76237 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPR1-TNR XPR1 chr1 180601406 - TNR chr1 175497505 - Exonic hg19 SARC TCGA-DX-A1L0-01A 4 3 CDS-5'UTR Intra-chr q25.3 q25.1 Seq+ 76238 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPR1-TOR3A XPR1 chr1 180805852 - TOR3A chr1 179066963 + Exonic hg19 HNSC TCGA-CV-7091-01A 62 52 Out-of-frame Intra-chr q25.3 q25.2 Seq+ 76239 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XPR1-TYW3 XPR1 chr1 180651547 - TYW3 chr1 75202226 + Exonic hg19 BRCA TCGA-A8-A08I-01A 11 13 Out-of-frame Intra-chr q25.3 p31.1 Seq+ 76240 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XRCC5-ABCB1 XRCC5 chr2 216997110 - ABCB1 chr7 87133765 - Exonic hg19 LIHC TCGA-BC-A10T-01A 40 32 In-Frame Inter-chr q35 Tumor suppressor gene q21.12 Seq+ 76241 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XRCC5-ACADL XRCC5 chr2 217059709 - ACADL chr2 211060062 - Exonic hg19 PRAD TCGA-KK-A8IH-01A 72 3 In-Frame Intra-chr q35 Tumor suppressor gene q34 Seq+ 76242 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XRCC5-CCT5 XRCC5 chr2 217071014 - CCT5 chr5 10250033 + Exonic hg19 CESC TCGA-C5-A2M1-01A 2 2 Out-of-frame Inter-chr q35 Tumor suppressor gene p15.2 76243 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XRCC6-ARSB XRCC6 chr22 42024234 - ARSB chr5 78265015 - Exonic hg19 SKCM TCGA-XV-AAZY-01A 41 72 In-Frame Inter-chr q13.2 q14.1 Seq+ 76244 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XRCC6-GPX5 XRCC6 chr22 42018090 - GPX5 chr6 28500098 + Exonic hg19 BRCA TCGA-A7-A0DA-01A 26 36 In-Frame Inter-chr q13.2 Seq+ 76245 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XRCC6BP1-HIGD1C XRCC6BP1 chr12 58340859 - HIGD1C chr12 51354751 + Exonic hg19 LGG TCGA-S9-A7R2-01A 23 9 Out-of-frame Intra-chr q13.12 Seq+ 76246 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XRN1-PIP4K2A XRN1 chr3 142166712 - PIP4K2A chr10 22898646 - Exonic hg19 BRCA TCGA-A8-A07C-01A 20 3 In-Frame Inter-chr q23 p12.2 Seq+ 76247 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XRN1-PRKCE XRN1 chr3 142089327 - PRKCE chr2 46411874 + Exonic hg19 LUAD TCGA-69-7979-01A 5 2 In-Frame Inter-chr q23 p21 Tumor suppressor gene 76248 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XRN1-RUVBL1 XRN1 chr3 142098924 - RUVBL1 chr3 127838257 - Exonic hg19 SKCM TCGA-ER-A19F-06A 44 36 In-Frame Intra-chr q23 q21.3 Seq+ 76249 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XRN1-SMYD3 XRN1 chr3 142166712 - SMYD3 chr1 246093239 - Exonic hg19 GBM TCGA-14-1402-02A 18 7 In-Frame Inter-chr q23 q44 Transcription factor Seq+ 76250 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XRN2-RIN2 XRN2 chr20 21284111 - RIN2 chr20 19915743 + Exonic hg19 SARC TCGA-DX-A6B8-01A 2 1 In-Frame Intra-chr p11.22 p11.23 76251 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XRN2-TMEM40 XRN2 chr20 21335510 - TMEM40 chr3 12791339 - Exonic hg19 LUSC TCGA-52-7810-01A 28 20 CDS-5'UTR Inter-chr p11.22 p25.2 Seq+ 76252 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XRRA1-C11orf30 XRRA1 chr11 74659973 - C11orf30 chr11 76174865 + Exonic hg19 SKCM TCGA-D3-A8GB-06A 79 52 5'UTR-CDS Intra-chr q13.4 Seq+ 76253 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XRRA1-FAM168A XRRA1 chr11 74647929 - FAM168A chr11 73141815 - Exonic hg19 BRCA TCGA-A8-A07B-01A 14 10 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 76254 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XRRA1-GUCY1A2 XRRA1 chr11 74656063 - GUCY1A2 chr11 106647308 - Exonic hg19 BRCA TCGA-XX-A899-01A 13 10 5'UTR-CDS Intra-chr q13.4 q22.3 Oncogene Seq+ 76255 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XRRA1-SHANK2 XRRA1 chr11 74641345 - SHANK2 chr11 70821095 - Exonic hg19 LIHC TCGA-2Y-A9GS-01A 95 111 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 76256 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XXbac-B461K10.4-CTXN3 XXbac-B461K10.4 chr22 18507047 - CTXN3 chr5 126989009 + Exonic hg19 LUAD TCGA-38-4632-01A 2 1 Out-of-frame Inter-chr q23.2 76257 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XXbac-B461K10.4-PTGER3 XXbac-B461K10.4 chr22 18507047 - PTGER3 chr1 71318542 - Exonic hg19 PCPG TCGA-QT-A5XJ-01A 37 9 Out-of-frame Inter-chr p31.1 76258 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XXbac-B461K10.4-XBP1 XXbac-B461K10.4 chr22 18507047 - XBP1 chr22 29193193 - Exonic hg19 GBM TCGA-06-0648-01A 8 7 Out-of-frame Intra-chr q12.1 76259 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XXbac-BPG246D15.9-DAXX XXbac-BPG246D15.9 chr6 32800110 - DAXX chr6 33291807 - Exonic hg19 STAD TCGA-BR-8678-01A 5 10 Out-of-frame Intra-chr 76260 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XXbac-BPG246D15.9-VARS XXbac-BPG246D15.9 chr6 32797177 - VARS chr6 31760897 - Exonic hg19 LGG TCGA-FG-5963-02A 3 1 Out-of-frame Intra-chr 76261 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XYLB-DLEC1 XYLB chr3 38420833 - DLEC1 chr3 38149075 + Exonic hg19 STAD TCGA-BR-4366-01A 3 16 Out-of-frame Intra-chr p22.2 p22.2 Tumor suppressor gene Seq+ 76262 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XYLB-ITGA9 XYLB chr3 38390123 - ITGA9 chr3 37695205 + Exonic hg19 BRCA TCGA-AN-A0AR-01A 2 4 Out-of-frame Intra-chr p22.2 p22.2 Oncogene Seq+ 76263 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XYLT1-ABR XYLT1 chr16 17352845 - ABR chr17 1028702 - Exonic hg19 SARC TCGA-IE-A4EJ-01A 3 5 In-Frame Inter-chr p12.3 p13.3 76264 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XYLT1-FAM86A XYLT1 chr16 17564291 - FAM86A chr16 5145515 - Exonic hg19 SARC TCGA-QC-A6FX-01A 7 17 In-Frame Intra-chr p12.3 Seq+ 76265 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XYLT1-GALNT6 XYLT1 chr16 17292069 - GALNT6 chr12 51771151 - Exonic hg19 SARC TCGA-DX-A1KU-01A 3 1 In-Frame Inter-chr p12.3 q13.13 76266 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XYLT1-HS3ST4 XYLT1 chr16 17292069 - HS3ST4 chr16 26146933 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 8 4 In-Frame Intra-chr p12.3 p12.1 Seq+ 76267 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XYLT1-QPRT XYLT1 chr16 17352845 - QPRT chr16 29705985 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 11 In-Frame Intra-chr p12.3 p11.2 Seq+ 76268 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq XYLT1-SPN XYLT1 chr16 17352845 - SPN chr16 29675016 + Exonic hg19 STAD TCGA-BR-A4QI-01A 2 5 CDS-5'UTR Intra-chr p12.3 p11.2 76269 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YAF2-SYT1 YAF2 chr12 42631401 - SYT1 chr12 79258778 + Exonic hg19 BRCA TCGA-AR-A2LN-01A 2 4 CDS-5'UTR Intra-chr q12 q21.2 Seq+ 76270 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YAP1-C11orf70 YAP1 chr11 101985125 - C11orf70 chr11 101951946 + Exonic hg19 LUAD TCGA-62-A46O-01A 10 6 In-Frame Intra-chr q22.1 Tumor suppressor gene q22.1 Seq+ 76271 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YAP1-C11orf70 YAP1 chr11 101985125 - C11orf70 chr11 101918546 + Exonic hg19 LUAD TCGA-69-7979-01A 5 16 In-Frame Intra-chr q22.1 Tumor suppressor gene q22.1 Seq+ 76272 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YAP1-MAML2 YAP1 chr11 102076805 - MAML2 chr11 95826681 - Exonic hg19 SKCM TCGA-EE-A17Z-06A 13 13 In-Frame Intra-chr q22.1 Tumor suppressor gene q21 Oncogene KB Pub Seq+ 76273 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YAP1-MRPL48 YAP1 chr11 102033302 - MRPL48 chr11 73574217 + Exonic hg19 SKCM TCGA-EB-A82B-01A 38 23 Out-of-frame Intra-chr q22.1 Tumor suppressor gene q13.4 Seq+ 76274 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YAP1-RNF130 YAP1 chr11 101985125 - RNF130 chr5 179467647 - Exonic hg19 SARC TCGA-DX-A23T-01A 16 32 Out-of-frame Inter-chr q22.1 Tumor suppressor gene q35.3 Seq+ 76275 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YAP1-SS18 YAP1 chr11 101981900 - SS18 chr18 23667541 - Exonic hg19 CESC TCGA-RA-A741-01A 3 3 In-Frame Inter-chr q22.1 Tumor suppressor gene q11.2 Seq+ 76276 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YAP1-STIM1 YAP1 chr11 102080295 - STIM1 chr11 4045103 + Exonic hg19 BRCA TCGA-A8-A086-01A 6 9 In-Frame Intra-chr q22.1 Tumor suppressor gene p15.4 Seq+ 76277 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YARS-ANKRD17 YARS chr1 33263364 - ANKRD17 chr4 73944607 - Exonic hg19 SARC TCGA-DX-A48P-01A 3 2 Out-of-frame Inter-chr p35.1 q13.3 76278 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YARS-C19orf76 YARS chr1 33246649 - C19orf76 chr19 50193363 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 85 5 Out-of-frame Inter-chr p35.1 76279 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YARS-IMPA2 YARS chr1 33251963 - IMPA2 chr18 12009882 + Exonic hg19 LIHC TCGA-DD-A73G-01A 2 1 Out-of-frame Inter-chr p35.1 p11.21 76280 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YARS-RNF19B YARS chr1 33276192 - RNF19B chr1 33415375 - Exonic hg19 GBM TCGA-27-1835-01A 3 6 In-Frame Intra-chr p35.1 p35.1 Seq+ 76281 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YEATS2-ATP11B YEATS2 chr3 183495488 - ATP11B chr3 182590144 + Exonic hg19 LUSC TCGA-56-A4BY-01A 734 291 In-Frame Intra-chr q27.1 q26.33 Oncogene Seq+ 76282 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YEATS4-CPSF6 YEATS4 chr12 69764755 - CPSF6 chr12 69663292 + Exonic hg19 READ TCGA-EI-6506-01A 23 18 CDS-3'UTR Intra-chr q15 q15 Seq+ 76283 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YEATS4-CPSF6 YEATS4 chr12 69764755 - CPSF6 chr12 69663292 + Exonic hg19 LIHC TCGA-G3-AAV7-01A 5 2 CDS-3'UTR Intra-chr q15 q15 Seq+ 76284 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YEATS4-EP400 YEATS4 chr12 69756687 - EP400 chr12 132527849 + Exonic hg19 GBM TCGA-06-0129-01A 2 3 In-Frame Intra-chr q15 q24.33 Oncogene Seq+ 76285 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YEATS4-LYZ YEATS4 chr12 69764755 - LYZ chr12 69743888 + Exonic hg19 LIHC TCGA-BC-A3KF-01A 35 24 In-Frame Intra-chr q15 q15 Seq+ 76286 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YEATS4-LYZ YEATS4 chr12 69764755 - LYZ chr12 69743888 + Exonic hg19 STAD TCGA-BR-8289-01A 28 194 In-Frame Intra-chr q15 q15 Seq+ 76287 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YEATS4-LYZ YEATS4 chr12 69759664 - LYZ chr12 69743888 + Exonic hg19 BLCA TCGA-BT-A0S7-01A 198 95 Out-of-frame Intra-chr q15 q15 Seq+ 76288 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YEATS4-MARS YEATS4 chr12 69764755 - MARS chr12 57905481 + Exonic hg19 GBM TCGA-06-0138-01A 31 99 Out-of-frame Intra-chr q15 q13.3 Seq+ 76289 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YEATS4-SLC35E3 YEATS4 chr12 69759664 - SLC35E3 chr12 69152937 + Exonic hg19 LUAD TCGA-78-8662-01A 2 2 In-Frame Intra-chr q15 q15 Seq+ 76290 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YEATS4-XRCC6BP1 YEATS4 chr12 69764755 - XRCC6BP1 chr12 58339411 + Exonic hg19 GBM TCGA-06-0138-01A 266 642 In-Frame Intra-chr q15 Seq+ 76291 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YES1-SCFD2 YES1 chr18 812115 - SCFD2 chr4 53787037 - Exonic hg19 BLCA TCGA-GU-A42P-01A 60 16 5'UTR-CDS Inter-chr p11.32 q12 Seq+ 76292 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YIPF1-MRPL15 YIPF1 chr1 54348786 - MRPL15 chr8 55059942 + Exonic hg19 BLCA TCGA-FD-A3SJ-01A 18 14 Out-of-frame Inter-chr p32.3 q11.23 Seq+ 76293 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YIPF1-USP24 YIPF1 chr1 54331873 - USP24 chr1 55563390 - Exonic hg19 LIHC TCGA-EP-A2KA-01A 2 2 In-Frame Intra-chr p32.3 p32.3 Seq+ 76294 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YIPF1-YTHDF2 YIPF1 chr1 54343988 - YTHDF2 chr1 29095441 + Exonic hg19 HNSC TCGA-CQ-6228-01A 2 49 Out-of-frame Intra-chr p32.3 p35.3 Seq+ 76295 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YIPF3-SERPING1 YIPF3 chr6 43480880 - SERPING1 chr11 57365161 + Exonic hg19 LIHC TCGA-ED-A82E-01A 2 1 Out-of-frame Inter-chr p21.1 q12.1 76296 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YKT6-EIF3B YKT6 chr7 44240838 - EIF3B chr7 2419029 + Exonic hg19 SARC TCGA-SG-A849-01A 111 102 Out-of-frame Intra-chr p13 p22.3 Seq+ 76297 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YME1L1-SLC35D2 YME1L1 chr10 27437835 - SLC35D2 chr9 99122503 - Exonic hg19 BRCA TCGA-E2-A1IH-01A 24 22 In-Frame Inter-chr p12.1 q22.32 Seq+ 76298 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YPEL2-BPTF YPEL2 chr17 57430887 - BPTF chr17 65850056 + Exonic hg19 PAAD TCGA-HZ-A4BH-01A 13 3 Out-of-frame Intra-chr q22 q24.2 Transcription factor Seq+ 76299 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YPEL2-HEATR6 YPEL2 chr17 57466829 - HEATR6 chr17 58145093 - Exonic hg19 LUAD TCGA-55-8615-01A 13 4 In-Frame Intra-chr q22 q23.1 Seq+ 76300 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YPEL2-HSPA12B YPEL2 chr17 57409185 - HSPA12B chr20 3730616 + Exonic hg19 BRCA TCGA-E2-A109-01A 5 7 5'UTR-CDS Inter-chr q22 p13 Seq+ 76301 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YPEL2-SDF2 YPEL2 chr17 57430887 - SDF2 chr17 26982501 - Exonic hg19 BRCA TCGA-A8-A08O-01A 12 14 Out-of-frame Intra-chr q22 q11.2 Seq+ 76302 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YPEL2-UBE2Z YPEL2 chr17 57409185 - UBE2Z chr17 46988170 + Exonic hg19 BRCA TCGA-AO-A0JG-01A 9 4 5'UTR-CDS Intra-chr q22 q21.32 Seq+ 76303 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YPEL3-EXD3 YPEL3 chr16 30106573 - EXD3 chr9 140218595 - Exonic hg19 ACC TCGA-P6-A5OF-01A 84 58 In-Frame Inter-chr p11.2 Tumor suppressor gene q34.3 Seq+ 76304 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YTHDC1-ADAMTS3 YTHDC1 chr4 69202745 - ADAMTS3 chr4 73176898 - Exonic hg19 LUSC TCGA-66-2782-01A 8 4 In-Frame Intra-chr q13.3 76305 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YTHDC1-SULT1B1 YTHDC1 chr4 69188467 - SULT1B1 chr4 70626289 - Exonic hg19 LUSC TCGA-37-5819-01A 4 2 CDS-5'UTR Intra-chr q13.3 76306 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YTHDF1-RP11-1102P16.1 YTHDF1 chr20 61833639 - RP11-1102P16.1 chr8 72448083 - Exonic hg19 SKCM TCGA-EE-A2MH-06A 28 39 Out-of-frame Inter-chr q13.33 76307 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YTHDF2-EYA3 YTHDF2 chr1 29070498 - EYA3 chr1 28304985 - Exonic hg19 UCS TCGA-N6-A4VG-01A 7 11 Out-of-frame Intra-chr p35.3 p35.3 Seq+ 76308 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YWHAB-ARHGAP32 YWHAB chr20 43514527 - ARHGAP32 chr11 128963602 - Exonic hg19 BRCA TCGA-D8-A1XO-01A 9 6 5'UTR-CDS Inter-chr q13.12 q24.3 Seq+ 76309 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YWHAB-BCL2L1 YWHAB chr20 43514527 - BCL2L1 chr20 30310133 - Exonic hg19 COAD TCGA-A6-2675-01A 26 12 Out-of-frame Intra-chr q13.12 q11.21 Oncogene Seq+ 76310 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YWHAB-GLO1 YWHAB chr20 43514527 - GLO1 chr6 38654750 - Exonic hg19 COAD TCGA-DM-A1D7-01A 58 57 5'UTR-CDS Inter-chr q13.12 p21.2 Seq+ 76311 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YWHAE-GCGR YWHAE chr17 1303341 - GCGR chr17 79766718 + Exonic hg19 UCS TCGA-N9-A4PZ-01A 99 42 CDS-5'UTR Intra-chr p13.3 q25.3 Seq+ 76312 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YWHAE-INPP5K YWHAE chr17 1303341 - INPP5K chr17 1417273 - Exonic hg19 COAD TCGA-AZ-4614-01A 82 48 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 76313 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YWHAE-PITPNA YWHAE chr17 1303341 - PITPNA chr17 1424939 - Exonic hg19 COAD TCGA-AZ-4614-01A 140 99 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 76314 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YWHAE-SLC43A2 YWHAE chr17 1257505 - SLC43A2 chr17 1489345 - Exonic hg19 LUAD TCGA-55-8094-01A 15 20 In-Frame Intra-chr p13.3 Seq+ 76315 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YWHAG-AL353597.1 YWHAG chr7 75988039 - AL353597.1 chr6 37502052 + Exonic hg19 PCPG TCGA-QR-A6GR-01A 7 2 Out-of-frame Inter-chr q11.23 p21.2 76316 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YWHAG-OPA3 YWHAG chr7 75988039 - OPA3 chr19 46057169 - Exonic hg19 SKCM TCGA-D9-A149-06A 47 36 Out-of-frame Inter-chr q11.23 q13.32 Seq+ 76317 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YWHAG-RAB11FIP1 YWHAG chr7 75988039 - RAB11FIP1 chr8 37735069 - Exonic hg19 OV TCGA-13-0908-01B 8 7 Out-of-frame Inter-chr q11.23 p11.23 Seq+ 76318 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YWHAZ-GAL YWHAZ chr8 101964157 - GAL chr11 68452392 + Exonic hg19 BLCA TCGA-XF-AAMZ-01A 183 170 5'UTR-5'UTR Inter-chr q22.3 q13.2 Seq+ 76319 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YY1-CCNK YY1 chr14 100706260 - CCNK chr14 99968544 + Exonic hg19 LUAD TCGA-44-A47G-01A 4 5 Out-of-frame Intra-chr q32.2 Transcription factor q32.2 Seq+ 76320 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YY1-KIAA0748 YY1 chr14 100706260 - KIAA0748 chr12 55344174 - Exonic hg19 SARC TCGA-DX-A2IZ-01A 29 22 Out-of-frame Inter-chr q32.2 Transcription factor 76321 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq YY1AP1-ARHGEF2 YY1AP1 chr1 155638418 - ARHGEF2 chr1 155952991 - Exonic hg19 SARC TCGA-SG-A6Z7-01A 21 11 CDS-5'UTR Intra-chr q22 q22 Seq+ 76322 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq Z83844.2-LGALS1 Z83844.2 chr22 38084999 - LGALS1 chr22 38072993 + Exonic hg19 BLCA TCGA-G2-A2ES-01A 441 396 Out-of-frame Intra-chr q13.1 q13.1 76323 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq Z83844.2-STARD3 Z83844.2 chr22 38084022 - STARD3 chr17 37809734 + Exonic hg19 UCEC TCGA-EY-A54A-01A 21 4 Out-of-frame Inter-chr q13.1 q12 76324 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBED4-C7orf10 ZBED4 chr22 50247637 - C7orf10 chr7 40277234 + Exonic hg19 LUAD TCGA-38-4628-01A 7 23 5'UTR-CDS Inter-chr q13.33 Transcription factor Seq+ 76325 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBED4-RANGAP1 ZBED4 chr22 50247637 - RANGAP1 chr22 41670731 - Exonic hg19 SKCM TCGA-FS-A1ZK-06A 2 8 5'UTR-CDS Intra-chr q13.33 Transcription factor q13.2 Seq+ 76326 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBED4-SPAG4 ZBED4 chr22 50247637 - SPAG4 chr20 34207117 + Exonic hg19 BRCA TCGA-BH-A0H7-01A 3 36 5'UTR-CDS Inter-chr q13.33 Transcription factor q11.22 Seq+ 76327 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB1-MTHFD1 ZBTB1 chr14 64990120 - MTHFD1 chr14 64894055 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 14 7 In-Frame Intra-chr q23.3 Transcription factor q23.3 Seq+ 76328 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB17-DLC1 ZBTB17 chr1 16299534 - DLC1 chr8 12973166 - Exonic hg19 UCEC TCGA-D1-A3JQ-01A 43 48 5'UTR-5'UTR Inter-chr p36.13 Transcription factor p22 Tumor suppressor gene Seq+ 76329 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB17-FAM131C ZBTB17 chr1 16271432 - FAM131C chr1 16386546 - Exonic hg19 BRCA TCGA-E2-A574-01A 3 5 Out-of-frame Intra-chr p36.13 Transcription factor p36.13 Seq+ 76330 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB17-FBXO42 ZBTB17 chr1 16274786 - FBXO42 chr1 16583254 - Exonic hg19 UCS TCGA-N8-A4PP-01A 3 1 In-Frame Intra-chr p36.13 Transcription factor p36.13 76331 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB17-MTOR ZBTB17 chr1 16269559 - MTOR chr1 11227574 - Exonic hg19 STAD TCGA-BR-4357-01A 11 4 Out-of-frame Intra-chr p36.13 Transcription factor p36.22 Oncogene 76332 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB2-AKAP12 ZBTB2 chr6 151694600 - AKAP12 chr6 151669846 + Exonic hg19 STAD TCGA-HU-A4H8-01A 4 38 Out-of-frame Intra-chr q25.1 Transcription factor q25.1 Tumor suppressor gene Seq+ 76333 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB2-SYNE1 ZBTB2 chr6 151694600 - SYNE1 chr6 152570397 - Exonic hg19 BRCA TCGA-AN-A0FW-01A 16 9 Out-of-frame Intra-chr q25.1 Transcription factor q25.2 Oncogene Seq+ 76334 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB20-C12orf41 ZBTB20 chr3 114219199 - C12orf41 chr12 49073616 - Exonic hg19 SKCM TCGA-XV-AAZW-01A 5 7 Out-of-frame Inter-chr q13.31 Transcription factor 76335 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB20-C3orf14 ZBTB20 chr3 114099064 - C3orf14 chr3 62305396 + Exonic hg19 LGG TCGA-HT-7689-01A 2 1 5'UTR-5'UTR Intra-chr q13.31 Transcription factor p14.2 76336 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB20-C3orf26 ZBTB20 chr3 114069121 - C3orf26 chr3 99865817 + Exonic hg19 KIRC TCGA-CJ-5671-01A 10 5 In-Frame Intra-chr q13.31 Transcription factor 76337 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB20-CD200R1 ZBTB20 chr3 114519948 - CD200R1 chr3 112666771 - Exonic hg19 KIRC TCGA-BP-4346-01A 19 11 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.2 Seq+ 76338 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB20-CD96 ZBTB20 chr3 114790066 - CD96 chr3 111366390 + Exonic hg19 BRCA TCGA-A8-A06U-01A 15 20 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.13 Seq+ 76339 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB20-CLDN11 ZBTB20 chr3 114069121 - CLDN11 chr3 170140951 + Exonic hg19 PRAD TCGA-HC-7211-01A 5 7 In-Frame Intra-chr q13.31 Transcription factor q26.2 Seq+ 76340 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB20-CPM ZBTB20 chr3 114219199 - CPM chr12 69252851 - Exonic hg19 SARC TCGA-DX-AB37-01A 3 2 5'UTR-CDS Inter-chr q13.31 Transcription factor q15 Seq+ 76341 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB20-DPYSL2 ZBTB20 chr3 114412375 - DPYSL2 chr8 26492296 + Exonic hg19 COAD TCGA-A6-6137-01A 3 8 5'UTR-CDS Inter-chr q13.31 Transcription factor p21.2 Seq+ 76342 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB20-EPHA6 ZBTB20 chr3 114219199 - EPHA6 chr3 97439105 + Exonic hg19 LUAD TCGA-78-7162-01A 5 4 5'UTR-CDS Intra-chr q13.31 Transcription factor q11.2 76343 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB20-KIAA1797 ZBTB20 chr3 114619151 - KIAA1797 chr9 20916892 + Exonic hg19 PCPG TCGA-RT-A6YC-01A 32 15 Out-of-frame Inter-chr q13.31 Transcription factor 76344 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB20-LSAMP ZBTB20 chr3 114412375 - LSAMP chr3 115529261 - Exonic hg19 KIRC TCGA-B0-5096-01A 3 1 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.31 Tumor suppressor gene Seq+ 76345 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB20-LSAMP ZBTB20 chr3 114619151 - LSAMP chr3 115571464 - Exonic hg19 LGG TCGA-E1-5307-01A 62 65 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.31 Tumor suppressor gene Seq+ 76346 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB20-LSAMP ZBTB20 chr3 114619151 - LSAMP chr3 115529261 - Exonic hg19 SKCM TCGA-EE-A3J4-06A 10 9 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.31 Tumor suppressor gene Seq+ 76347 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB20-LSAMP ZBTB20 chr3 114412375 - LSAMP chr3 115571464 - Exonic hg19 PRAD TCGA-EJ-8468-01A 9 6 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.31 Tumor suppressor gene Seq+ 76348 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB20-LSAMP ZBTB20 chr3 114519948 - LSAMP chr3 116728221 - Exonic hg19 PRAD TCGA-EJ-A46G-01A 16 10 5'UTR-5'UTR Intra-chr q13.31 Transcription factor q13.31 Tumor suppressor gene Seq+ 76349 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB20-LSAMP ZBTB20 chr3 114519948 - LSAMP chr3 115571464 - Exonic hg19 LIHC TCGA-EP-A2KA-01A 5 3 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.31 Tumor suppressor gene Seq+ 76350 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB20-LSAMP ZBTB20 chr3 114790066 - LSAMP chr3 115571464 - Exonic hg19 SKCM TCGA-FS-A1ZJ-06A 3 2 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.31 Tumor suppressor gene Seq+ 76351 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB20-LSAMP ZBTB20 chr3 114693213 - LSAMP chr3 115738487 - Exonic hg19 PRAD TCGA-J4-AATZ-01A 67 57 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.31 Tumor suppressor gene Seq+ 76352 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB20-LSAMP ZBTB20 chr3 114412375 - LSAMP chr3 115805403 - Exonic hg19 LUAD TCGA-MP-A4TF-01A 4 2 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.31 Tumor suppressor gene Seq+ 76353 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB20-MTL5 ZBTB20 chr3 114219199 - MTL5 chr11 68475968 - Exonic hg19 SARC TCGA-K1-A6RV-01A 20 7 5'UTR-CDS Inter-chr q13.31 Transcription factor Seq+ 76354 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB20-PGD ZBTB20 chr3 114519948 - PGD chr1 10479474 + Exonic hg19 CESC TCGA-EA-A1QS-01A 10 4 5'UTR-CDS Inter-chr q13.31 Transcription factor p36.22 Seq+ 76355 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB20-PTPRD ZBTB20 chr3 114519948 - PTPRD chr9 8733946 - Exonic hg19 LIHC TCGA-2Y-A9H6-01A 2 2 5'UTR-5'UTR Inter-chr q13.31 Transcription factor Oncogene Tumor suppressor gene 76356 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB20-RP11-631B21.2 ZBTB20 chr3 114693213 - RP11-631B21.2 chr3 107642478 + Exonic hg19 PRAD TCGA-KK-A6E8-01A 5 4 Out-of-frame Intra-chr q13.31 Transcription factor 76357 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB20-TIGIT ZBTB20 chr3 114219199 - TIGIT chr3 114012847 + Exonic hg19 PRAD TCGA-TP-A8TV-01A 17 8 5'UTR-5'UTR Intra-chr q13.31 Transcription factor q13.31 76358 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB20-WDR52 ZBTB20 chr3 114790066 - WDR52 chr3 113022964 - Exonic hg19 LUSC TCGA-68-8250-01A 4 4 5'UTR-CDS Intra-chr q13.31 Transcription factor Seq+ 76359 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB24-BEST3 ZBTB24 chr6 109802278 - BEST3 chr12 70049593 - Exonic hg19 SARC TCGA-DX-A2J1-01A 4 3 Out-of-frame Inter-chr q21 Transcription factor q15 Seq+ 76360 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB24-CMAHP ZBTB24 chr6 109796602 - CMAHP chr6 25082107 - Exonic hg19 BRCA TCGA-OL-A5DA-01A 22 12 CDS-3'UTR Intra-chr q21 Transcription factor p22.3 Seq+ 76361 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB24-SCML4 ZBTB24 chr6 109802278 - SCML4 chr6 108029215 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 2 2 In-Frame Intra-chr q21 Transcription factor q21 Transcription factor 76362 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB24-STK32C ZBTB24 chr6 109797378 - STK32C chr10 134059459 - Exonic hg19 SARC TCGA-QQ-A5VA-01A 25 11 In-Frame Inter-chr q21 Transcription factor q26.3 Seq+ 76363 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB25-TPRG1 ZBTB25 chr14 64970379 - TPRG1 chr3 188956522 + Exonic hg19 LUSC TCGA-L3-A524-01A 18 4 5'UTR-CDS Inter-chr q23.3 Transcription factor q28 Seq+ 76364 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB38-ACPL2 ZBTB38 chr3 141122873 - ACPL2 chr3 140997184 + Exonic hg19 LUSC TCGA-56-7823-01B 34 9 5'UTR-CDS Intra-chr q23 Transcription factor Seq+ 76365 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB38-ACPL2 ZBTB38 chr3 141122873 - ACPL2 chr3 140978965 + Exonic hg19 LUSC TCGA-77-7142-01A 28 16 5'UTR-5'UTR Intra-chr q23 Transcription factor Seq+ 76366 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB38-ACPL2 ZBTB38 chr3 141122873 - ACPL2 chr3 140978965 + Exonic hg19 KIRC TCGA-CJ-5671-01A 2 6 5'UTR-5'UTR Intra-chr q23 Transcription factor Seq+ 76367 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB38-C17orf64 ZBTB38 chr3 141088788 - C17orf64 chr17 58508542 + Exonic hg19 ACC TCGA-OR-A5JK-01A 12 4 5'UTR-CDS Inter-chr q23 Transcription factor q23.2 Seq+ 76368 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB40-NBPF3 ZBTB40 chr1 22778497 - NBPF3 chr1 21792580 + Exonic hg19 UCEC TCGA-EY-A4KR-01A 2 1 5'UTR-5'UTR Intra-chr p36.12 Transcription factor p36.12 76369 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB40-PRCC ZBTB40 chr1 22778497 - PRCC chr1 156752074 + Exonic hg19 LGG TCGA-TM-A84J-01A 36 22 5'UTR-CDS Intra-chr p36.12 Transcription factor q23.1 Seq+ 76370 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB40-TMEM57 ZBTB40 chr1 22817138 - TMEM57 chr1 25824755 + Exonic hg19 THYM TCGA-YT-A95D-01A 13 5 In-Frame Intra-chr p36.12 Transcription factor p36.11 Seq+ 76371 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB40-VPS13D ZBTB40 chr1 22848956 - VPS13D chr1 12294248 + Exonic hg19 LUAD TCGA-55-8507-01A 5 2 CDS-5'UTR Intra-chr p36.12 Transcription factor p36.22 Seq+ 76372 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB44-FRS2 ZBTB44 chr11 130184270 - FRS2 chr12 69955960 + Exonic hg19 SARC TCGA-FX-A2QS-01A 6 20 5'UTR-5'UTR Inter-chr q24.3 Transcription factor q15 Seq+ 76373 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB45-ZFR2 ZBTB45 chr19 59027762 - ZFR2 chr19 3823401 - Exonic hg19 BRCA TCGA-BH-A0BP-01A 7 11 In-Frame Intra-chr q13.43 Transcription factor p13.3 Seq+ 76374 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB48-ESPN ZBTB48 chr1 6647351 - ESPN chr1 6488286 + Exonic hg19 GBM TCGA-14-0786-01B 3 6 In-Frame Intra-chr p36.31 Tumor suppressor gene Transcription factor p36.31 76375 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB48-TAS1R1 ZBTB48 chr1 6648904 - TAS1R1 chr1 6637010 + Exonic hg19 BRCA TCGA-D8-A1XK-01A 14 2 In-Frame Intra-chr p36.31 Tumor suppressor gene Transcription factor p36.31 Seq+ 76376 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB5-SMARCA2 ZBTB5 chr9 37465212 - SMARCA2 chr9 2086829 + Exonic hg19 BLCA TCGA-DK-A3IQ-01A 2 2 5'UTR-CDS Intra-chr p13.2 Transcription factor p24.3 Tumor suppressor gene 76377 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB7A-MAP2K2 ZBTB7A chr19 4053969 - MAP2K2 chr19 4097341 - Exonic hg19 UCEC TCGA-AX-A3FX-01A 9 4 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 STE:STE7 Oncogene Seq+ 76378 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB7A-MAP2K2 ZBTB7A chr19 4066680 - MAP2K2 chr19 4110653 - Exonic hg19 UCEC TCGA-EO-A22X-01A 5 11 5'UTR-CDS Intra-chr p13.3 Transcription factor p13.3 STE:STE7 Oncogene Seq+ 76379 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB7A-TNK1 ZBTB7A chr19 4053969 - TNK1 chr17 7286155 + Exonic hg19 LAML TCGA-AB-2938-03A 216 148 CDS-5'UTR Inter-chr p13.3 Transcription factor TK:Ack Tumor suppressor gene Seq+ 76380 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB7B-NUCKS1 ZBTB7B chr1 154975419 - NUCKS1 chr1 205698749 - Exonic hg19 PRAD TCGA-FC-A5OB-01A 40 7 5'UTR-CDS Intra-chr q21.3 Transcription factor q32.1 Seq+ 76381 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB7B-ZMPSTE24 ZBTB7B chr1 154975419 - ZMPSTE24 chr1 40733458 + Exonic hg19 LIHC TCGA-DD-A4NE-01A 26 13 5'UTR-CDS Intra-chr q21.3 Transcription factor p34.2 Seq+ 76382 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB7C-FBXO15 ZBTB7C chr18 45864545 - FBXO15 chr18 71740965 - Exonic hg19 LGG TCGA-CS-6666-01A 4 6 5'UTR-CDS Intra-chr q21.1 Tumor suppressor gene Transcription factor q22.3 Seq+ 76383 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB8OS-IGF2BP1 ZBTB8OS chr1 33093109 - IGF2BP1 chr17 47109272 + Exonic hg19 BRCA TCGA-A8-A09A-01A 2 2 Out-of-frame Inter-chr p35.1 q21.32 Seq+ 76384 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB8OS-SYNC ZBTB8OS chr1 33116034 - SYNC chr1 33149983 - Exonic hg19 STAD TCGA-CD-A487-01A 2 2 Out-of-frame Intra-chr p35.1 p35.1 Seq+ 76385 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZBTB8OS-YARS ZBTB8OS chr1 33099246 - YARS chr1 33252676 - Exonic hg19 UCEC TCGA-2E-A9G8-01A 5 7 In-Frame Intra-chr p35.1 p35.1 Seq+ 76386 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H11A-TMCC2 ZC3H11A chr1 203800899 - TMCC2 chr1 205238078 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 81 123 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 76387 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H13-CCDC169-SOHLH2 ZC3H13 chr13 46616299 - CCDC169-SOHLH2 chr13 36776230 - Exonic hg19 READ TCGA-AF-2693-01A 2 3 Out-of-frame Intra-chr q14.13 q13.3 76388 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H13-MRPS31 ZC3H13 chr13 46553948 - MRPS31 chr13 41303737 - Exonic hg19 LUAD TCGA-49-AAR0-01A 3 1 In-Frame Intra-chr q14.13 q14.11 Seq+ 76389 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H15-CPS1 ZC3H15 chr2 187351184 - CPS1 chr2 211454830 + Exonic hg19 PRAD TCGA-KC-A7F3-01A 3 6 In-Frame Intra-chr q32.1 q34 Seq+ 76390 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H15-GULP1 ZC3H15 chr2 187351184 - GULP1 chr2 189342386 + Exonic hg19 SKCM TCGA-EB-A57M-01A 3 2 CDS-5'UTR Intra-chr q32.1 q32.1 Seq+ 76391 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H15-SERINC1 ZC3H15 chr2 187351184 - SERINC1 chr6 122779826 - Exonic hg19 PRAD TCGA-G9-6348-01A 3 5 In-Frame Inter-chr q32.1 q22.31 Seq+ 76392 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H18-ADAD2 ZC3H18 chr16 88677944 - ADAD2 chr16 84228048 + Exonic hg19 SARC TCGA-DX-AB37-01A 3 1 Out-of-frame Intra-chr q24.2 q24.1 76393 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H18-CHMP1A ZC3H18 chr16 88636974 - CHMP1A chr16 89713739 - Exonic hg19 GBM TCGA-06-0210-01A 18 36 5'UTR-CDS Intra-chr q24.2 q24.3 Seq+ 76394 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H18-CHMP1A ZC3H18 chr16 88636974 - CHMP1A chr16 89713739 - Exonic hg19 GBM TCGA-06-0210-02A 15 40 5'UTR-CDS Intra-chr q24.2 q24.3 Seq+ 76395 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H3-C8orf73 ZC3H3 chr8 144618427 - C8orf73 chr8 144650058 - Exonic hg19 STAD TCGA-MX-A666-01A 5 30 Out-of-frame Intra-chr 76396 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H3-C8orf73 ZC3H3 chr8 144618427 - C8orf73 chr8 144654355 - Exonic hg19 UCEC TCGA-PG-A5BC-01A 6 4 Out-of-frame Intra-chr 76397 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H3-KIAA0907 ZC3H3 chr8 144618427 - KIAA0907 chr1 155903640 - Exonic hg19 LUAD TCGA-38-4630-01A 12 2 Out-of-frame Inter-chr q22 Seq+ 76398 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H3-KLK3 ZC3H3 chr8 144547887 - KLK3 chr19 51359496 + Exonic hg19 BRCA TCGA-AC-A5XU-01A 18 9 Out-of-frame Inter-chr q13.33 Seq+ 76399 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H3-PYCRL ZC3H3 chr8 144618427 - PYCRL chr8 144690296 - Exonic hg19 LUSC TCGA-66-2793-01A 25 18 In-Frame Intra-chr Seq+ 76400 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H3-SCRIB ZC3H3 chr8 144547887 - SCRIB chr8 144889183 - Exonic hg19 LUSC TCGA-85-8580-01A 20 2 In-Frame Intra-chr Tumor suppressor gene 76401 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H3-TRAPPC9 ZC3H3 chr8 144618427 - TRAPPC9 chr8 141461482 - Exonic hg19 SARC TCGA-DX-A7EN-01A 3 3 Out-of-frame Intra-chr q24.3 Seq+ 76402 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H3-YY1 ZC3H3 chr8 144557568 - YY1 chr14 100728641 + Exonic hg19 BRCA TCGA-A8-A09N-01A 9 4 In-Frame Inter-chr q32.2 Transcription factor Seq+ 76403 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H4-KANK3 ZC3H4 chr19 47615681 - KANK3 chr19 8389980 - Exonic hg19 SARC TCGA-3B-A9HX-01A 3 2 Out-of-frame Intra-chr q13.32 p13.2 Seq+ 76404 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H4-POLR2I ZC3H4 chr19 47597227 - POLR2I chr19 36605314 - Exonic hg19 BRCA TCGA-GM-A2DB-01A 72 99 In-Frame Intra-chr q13.32 q13.12 Seq+ 76405 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H4-TTLL3 ZC3H4 chr19 47589641 - TTLL3 chr3 9896243 + Exonic hg19 GBM TCGA-14-0817-01A 2 23 CDS-3'UTR Inter-chr q13.32 p25.3 Seq+ 76406 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H7A-GSPT1 ZC3H7A chr16 11856527 - GSPT1 chr16 11976952 - Exonic hg19 UCEC TCGA-AX-A2H4-01A 2 2 In-Frame Intra-chr p13.13 p13.13 Seq+ 76407 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H7A-GSPT1 ZC3H7A chr16 11868092 - GSPT1 chr16 11976952 - Exonic hg19 BLCA TCGA-XF-AAML-01A 56 38 In-Frame Intra-chr p13.13 p13.13 Seq+ 76408 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H7A-SYT13 ZC3H7A chr16 11862171 - SYT13 chr11 45268063 - Exonic hg19 STAD TCGA-RD-A8MW-01A 13 58 Out-of-frame Inter-chr p13.13 p11.2 Tumor suppressor gene Seq+ 76409 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H7B-GRAMD4 ZC3H7B chr22 41697776 - GRAMD4 chr22 47063993 + Exonic hg19 SKCM TCGA-FS-A4F4-06A 37 26 5'UTR-CDS Intra-chr q13.2 q13.31 Seq+ 76410 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H7B-L3MBTL2 ZC3H7B chr22 41723368 - L3MBTL2 chr22 41620024 + Exonic hg19 LIHC TCGA-2Y-A9H3-01A 2 2 In-Frame Intra-chr q13.2 q13.2 Seq+ 76411 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H7B-L3MBTL2 ZC3H7B chr22 41697776 - L3MBTL2 chr22 41615423 + Exonic hg19 LIHC TCGA-CC-A9FU-01A 35 29 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 76412 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H7B-L3MBTL2 ZC3H7B chr22 41723368 - L3MBTL2 chr22 41605700 + Exonic hg19 BRCA TCGA-EW-A6SB-01A 12 7 In-Frame Intra-chr q13.2 q13.2 Seq+ 76413 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H7B-MICALL1 ZC3H7B chr22 41723368 - MICALL1 chr22 38307959 + Exonic hg19 SKCM TCGA-XV-AAZY-01A 4 4 Out-of-frame Intra-chr q13.2 q13.1 Seq+ 76414 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H7B-SLC9A8 ZC3H7B chr22 41742212 - SLC9A8 chr20 48504366 + Exonic hg19 OV TCGA-61-2111-01A 2 8 In-Frame Inter-chr q13.2 q13.13 Seq+ 76415 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3H7B-USP49 ZC3H7B chr22 41728231 - USP49 chr6 41774749 - Exonic hg19 ESCA TCGA-VR-AA7B-01A 5 12 CDS-5'UTR Inter-chr q13.2 p21.1 Seq+ 76416 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3HAV1-BRAF ZC3HAV1 chr7 138758602 - BRAF chr7 140481493 - Exonic hg19 THCA TCGA-KS-A4ID-01A 7 3 In-Frame Intra-chr q34 q34 TKL:RAF Oncogene Seq+ 76417 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3HAV1-ITPKB ZC3HAV1 chr7 138749625 - ITPKB chr1 226836472 - Exonic hg19 BRCA TCGA-AO-A0J2-01A 5 5 Out-of-frame Inter-chr q34 q42.12 Seq+ 76418 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZC3HC1-ADAM22 ZC3HC1 chr7 129691061 - ADAM22 chr7 87704941 + Exonic hg19 KIRP TCGA-B9-4116-01A 14 7 In-Frame Intra-chr q32.2 q21.12 Seq+ 76419 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC11-ELAVL4 ZCCHC11 chr1 53018603 - ELAVL4 chr1 50642761 + Exonic hg19 BRCA TCGA-D8-A1JA-01A 3 5 5'UTR-CDS Intra-chr p32.3 p33 76420 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC11-NFIA ZCCHC11 chr1 53018603 - NFIA chr1 61824819 + Exonic hg19 SARC TCGA-DX-AB3A-01A 2 4 5'UTR-CDS Intra-chr p32.3 p31.3 Transcription factor Seq+ 76421 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC14-IMPA2 ZCCHC14 chr16 87493614 - IMPA2 chr18 11999053 + Exonic hg19 PRAD TCGA-ZG-A9M4-01A 3 4 Out-of-frame Inter-chr q24.2 p11.21 Seq+ 76422 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC14-SNX7 ZCCHC14 chr16 87493614 - SNX7 chr1 99225610 + Exonic hg19 BRCA TCGA-BH-A18J-01A 38 11 Out-of-frame Inter-chr q24.2 p21.3 Seq+ 76423 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC17-FABP3 ZCCHC17 chr1 31792013 - FABP3 chr1 31842404 - Exonic hg19 GBM TCGA-14-0786-01B 2 7 In-Frame Intra-chr p35.2 p35.2 Tumor suppressor gene 76424 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC6-ASPN ZCCHC6 chr9 88934499 - ASPN chr9 95237209 - Exonic hg19 SARC TCGA-K1-A6RU-01A 2 1 CDS-5'UTR Intra-chr q21.33 q22.31 76425 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC6-WIF1 ZCCHC6 chr9 88940249 - WIF1 chr12 65456356 - Exonic hg19 SARC TCGA-DX-A6BE-01A 3 7 In-Frame Inter-chr q21.33 q14.3 Tumor suppressor gene Seq+ 76426 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC7-ASTN2 ZCCHC7 chr9 37126939 - ASTN2 chr9 119626012 - Exonic hg19 BRCA TCGA-D8-A27R-01A 12 5 Out-of-frame Intra-chr p13.2 q33.1 Seq+ 76427 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC7-GLIPR2 ZCCHC7 chr9 37126939 - GLIPR2 chr9 36162359 + Exonic hg19 BRCA TCGA-A8-A08I-01A 24 23 In-Frame Intra-chr p13.2 p13.3 Seq+ 76428 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC7-LRRC19 ZCCHC7 chr9 37126939 - LRRC19 chr9 26995847 - Exonic hg19 LUSC TCGA-22-5489-01A 18 26 In-Frame Intra-chr p13.2 p21.2 Seq+ 76429 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC7-PRSS3 ZCCHC7 chr9 37302228 - PRSS3 chr9 33797827 + Exonic hg19 OV TCGA-10-0934-01A 8 5 Out-of-frame Intra-chr p13.2 p13.3 Seq+ 76430 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC7-TEK ZCCHC7 chr9 37126939 - TEK chr9 27197313 + Exonic hg19 BLCA TCGA-XF-A9T4-01A 28 24 In-Frame Intra-chr p13.2 p21.2 Seq+ 76431 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC7-UBAP1 ZCCHC7 chr9 37126939 - UBAP1 chr9 34220906 + Exonic hg19 LUSC TCGA-18-3419-01A 4 1 In-Frame Intra-chr p13.2 p13.3 76432 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC7-UNC13B ZCCHC7 chr9 37126939 - UNC13B chr9 35366944 + Exonic hg19 SARC TCGA-DX-A8BH-01A 5 5 Out-of-frame Intra-chr p13.2 p13.3 Seq+ 76433 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC7-ZBTB7C ZCCHC7 chr9 37126939 - ZBTB7C chr18 45864769 - Exonic hg19 LUSC TCGA-39-5011-01A 9 1 Out-of-frame Inter-chr p13.2 q21.1 Tumor suppressor gene Transcription factor Seq+ 76434 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC8-PTPN12 ZCCHC8 chr12 122964737 - PTPN12 chr7 77261665 + Exonic hg19 MESO TCGA-3H-AB3M-01A 3 6 Out-of-frame Inter-chr q24.31 q11.23 Tumor suppressor gene Seq+ 76435 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983374 - RSRC2 chr12 122990253 - Exonic hg19 BRCA TCGA-A8-A09M-01A 118 183 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 76436 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122962388 - RSRC2 chr12 123006846 - Exonic hg19 UCEC TCGA-AP-A5FX-01A 2 3 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 76437 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983374 - RSRC2 chr12 122990253 - Exonic hg19 KIRC TCGA-B2-4102-01A 167 101 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 76438 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983374 - RSRC2 chr12 122990253 - Exonic hg19 SKCM TCGA-BF-AAP8-01A 87 48 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 76439 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983374 - RSRC2 chr12 122990253 - Exonic hg19 BLCA TCGA-BL-A3JM-01A 256 169 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 76440 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983374 - RSRC2 chr12 122990253 - Exonic hg19 HNSC TCGA-CN-6988-01A 309 162 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 76441 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983374 - RSRC2 chr12 122990253 - Exonic hg19 BRCA TCGA-EW-A1P1-01A 173 130 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 76442 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983374 - RSRC2 chr12 122990253 - Exonic hg19 UCEC TCGA-EY-A3QX-01A 248 153 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 76443 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983374 - RSRC2 chr12 122990253 - Exonic hg19 LGG TCGA-HW-7487-01A 378 201 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 76444 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983374 - RSRC2 chr12 122995735 - Exonic hg19 ESCA TCGA-L5-A891-01A 2 15 In-Frame Intra-chr q24.31 q24.31 Seq+ 76445 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983374 - RSRC2 chr12 122990253 - Exonic hg19 PAAD TCGA-S4-A8RP-01A 159 63 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 76446 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983374 - RSRC2 chr12 122990253 - Exonic hg19 CESC TCGA-ZJ-AAX8-01A 188 97 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 76447 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCCHC8-TOP3A ZCCHC8 chr12 122984520 - TOP3A chr17 18196166 - Exonic hg19 BLCA TCGA-K4-A3WU-01B 36 20 Out-of-frame Inter-chr q24.31 Seq+ 76448 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZCRB1-LIMA1 ZCRB1 chr12 42717821 - LIMA1 chr12 50616268 - Exonic hg19 SKCM TCGA-D9-A6E9-06A 42 38 In-Frame Intra-chr q12 q13.12 Tumor suppressor gene Seq+ 76449 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDBF2-PSMD1 ZDBF2 chr2 207146633 - PSMD1 chr2 232003450 + Exonic hg19 SARC TCGA-DX-A1KY-01A 63 53 Out-of-frame Intra-chr q37.1 Seq+ 76450 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC11-TPST2 ZDHHC11 chr5 840610 - TPST2 chr22 26924228 - Exonic hg19 SKCM TCGA-D3-A1Q3-06A 4 2 Out-of-frame Inter-chr p15.33 q12.1 Seq+ 76451 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC13-MGAT4C ZDHHC13 chr11 19174231 - MGAT4C chr12 86405680 - Exonic hg19 SARC TCGA-DX-A3LT-01A 42 6 Out-of-frame Inter-chr p15.1 Seq+ 76452 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC14-ARID1B ZDHHC14 chr6 157803298 - ARID1B chr6 157431606 + Exonic hg19 SARC TCGA-K1-A42X-01A 6 6 Out-of-frame Intra-chr q25.3 q25.3 Oncogene Seq+ 76453 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC14-C6orf35 ZDHHC14 chr6 157803298 - C6orf35 chr6 157714031 - Exonic hg19 THCA TCGA-CE-A13K-01A 2 1 Out-of-frame Intra-chr q25.3 76454 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC14-FKBP5 ZDHHC14 chr6 157803298 - FKBP5 chr6 35688325 - Exonic hg19 MESO TCGA-TS-A7P1-01A 7 6 CDS-5'UTR Intra-chr q25.3 p21.31 Seq+ 76455 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC14-NOX3 ZDHHC14 chr6 158014178 - NOX3 chr6 155732494 - Exonic hg19 GBM TCGA-14-1402-02A 3 3 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 76456 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC14-TSPAN8 ZDHHC14 chr6 157803298 - TSPAN8 chr12 71676599 - Exonic hg19 SARC TCGA-DX-AB2F-01A 18 9 Out-of-frame Inter-chr q25.3 q21.1 Seq+ 76457 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC16-PFKL ZDHHC16 chr10 99206110 - PFKL chr21 45731988 + Exonic hg19 BRCA TCGA-A7-A3RF-01A 65 58 5'UTR-5'UTR Inter-chr q24.1 q22.3 Seq+ 76458 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC17-C10orf112 ZDHHC17 chr12 77158109 - C10orf112 chr10 19546613 + Exonic hg19 SARC TCGA-DX-A1L4-01A 5 2 Out-of-frame Inter-chr q21.2 76459 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC17-CSRP2 ZDHHC17 chr12 77158109 - CSRP2 chr12 77260041 - Exonic hg19 SARC TCGA-DX-A1KW-01A 20 8 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 76460 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC17-GLIPR1L1 ZDHHC17 chr12 77158109 - GLIPR1L1 chr12 75756882 + Exonic hg19 SKCM TCGA-EE-A2MS-06A 60 53 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 76461 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC17-MMP27 ZDHHC17 chr12 77158592 - MMP27 chr11 102573849 - Exonic hg19 SARC TCGA-DX-A2J1-01A 16 12 Out-of-frame Inter-chr q21.2 q22.2 Seq+ 76462 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC17-NAV3 ZDHHC17 chr12 77158109 - NAV3 chr12 78540149 + Exonic hg19 SARC TCGA-DX-A2J0-01A 4 6 In-Frame Intra-chr q21.2 q21.2 Seq+ 76463 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC17-NCR2 ZDHHC17 chr12 77158109 - NCR2 chr6 41303825 + Exonic hg19 SARC TCGA-DX-A3LU-01A 119 25 Out-of-frame Inter-chr q21.2 p21.1 Seq+ 76464 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC17-RAB3IP ZDHHC17 chr12 77158109 - RAB3IP chr12 70149164 + Exonic hg19 SARC TCGA-DX-A1L3-01A 41 13 Out-of-frame Intra-chr q21.2 q15 Seq+ 76465 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC17-RNFT2 ZDHHC17 chr12 77158109 - RNFT2 chr12 117271597 + Exonic hg19 LUAD TCGA-86-6851-01A 2 6 In-Frame Intra-chr q21.2 q24.22 Seq+ 76466 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC17-SYT1 ZDHHC17 chr12 77199219 - SYT1 chr12 79371579 + Exonic hg19 SARC TCGA-HB-A3YV-01A 14 6 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 76467 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC19-PCYT1A ZDHHC19 chr3 195934269 - PCYT1A chr3 195941244 - Exonic hg19 ACC TCGA-OR-A5K5-01A 37 3 CDS-3'UTR Intra-chr q29 q29 Seq+ 76468 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC2-FGD6 ZDHHC2 chr8 17014362 - FGD6 chr12 95479684 - Exonic hg19 SARC TCGA-DX-AB36-01A 11 4 Out-of-frame Inter-chr p22 Tumor suppressor gene q22 Seq+ 76469 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC2-LTBP1 ZDHHC2 chr8 17014362 - LTBP1 chr2 33572434 + Exonic hg19 BRCA TCGA-AR-A0TU-01A 3 7 In-Frame Inter-chr p22 Tumor suppressor gene p22.3 Seq+ 76470 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC20-EFHA1 ZDHHC20 chr13 21987791 - EFHA1 chr13 22084240 - Exonic hg19 UCEC TCGA-BK-A139-01A 2 10 Out-of-frame Intra-chr q12.11 Seq+ 76471 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC20-EFHA1 ZDHHC20 chr13 21987791 - EFHA1 chr13 22084240 - Exonic hg19 UCEC TCGA-BK-A139-02A 3 6 Out-of-frame Intra-chr q12.11 Seq+ 76472 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC20-EFHA1 ZDHHC20 chr13 21974512 - EFHA1 chr13 22088557 - Exonic hg19 BLCA TCGA-GV-A3JW-01A 2 1 In-Frame Intra-chr q12.11 Seq+ 76473 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC20-EFHA1 ZDHHC20 chr13 22033193 - EFHA1 chr13 22096789 - Exonic hg19 BLCA TCGA-HQ-A2OE-01A 2 1 In-Frame Intra-chr q12.11 Seq+ 76474 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC20-GJB6 ZDHHC20 chr13 22033193 - GJB6 chr13 20803888 - Exonic hg19 PAAD TCGA-IB-7652-01A 5 5 CDS-5'UTR Intra-chr q12.11 q12.11 Seq+ 76475 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC20-MIPEP ZDHHC20 chr13 21987791 - MIPEP chr13 24330757 - Exonic hg19 LUAD TCGA-93-A4JO-01A 121 124 Out-of-frame Intra-chr q12.11 q12.12 Seq+ 76476 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC20-SPATA13 ZDHHC20 chr13 21987791 - SPATA13 chr13 24796957 + Exonic hg19 STAD TCGA-VQ-AA68-01A 2 8 CDS-5'UTR Intra-chr q12.11 q12.12 Seq+ 76477 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC21-ELAVL2 ZDHHC21 chr9 14690335 - ELAVL2 chr9 23731123 - Exonic hg19 HNSC TCGA-DQ-7589-01A 7 2 5'UTR-CDS Intra-chr p22.3 p21.3 Seq+ 76478 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC21-PHGDH ZDHHC21 chr9 14639894 - PHGDH chr1 120277257 + Exonic hg19 SKCM TCGA-DA-A3F3-06A 79 53 In-Frame Inter-chr p22.3 p12 Seq+ 76479 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC24-C2CD3 ZDHHC24 chr11 66311175 - C2CD3 chr11 73768589 - Exonic hg19 BRCA TCGA-D8-A1JC-01A 35 18 In-Frame Intra-chr q13.2 q13.4 Seq+ 76480 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC24-FAM86A ZDHHC24 chr11 66311175 - FAM86A chr16 5135733 - Exonic hg19 LIHC TCGA-LG-A9QC-01A 2 3 In-Frame Inter-chr q13.2 76481 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC3-ATXN7 ZDHHC3 chr3 45017425 - ATXN7 chr3 63884075 + Exonic hg19 SKCM TCGA-FS-A1ZZ-06A 3 2 5'UTR-5'UTR Intra-chr p14.1 76482 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC5-LCT ZDHHC5 chr11 57440666 - LCT chr2 136555708 - Exonic hg19 BRCA TCGA-AN-A0AJ-01A 51 31 Out-of-frame Inter-chr q12.1 q21.3 Seq+ 76483 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC5-SMTNL1 ZDHHC5 chr11 57435659 - SMTNL1 chr11 57313354 + Exonic hg19 OV TCGA-24-1551-01A 4 17 5'UTR-CDS Intra-chr q12.1 q12.1 Seq+ 76484 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC6-ACSL5 ZDHHC6 chr10 114200292 - ACSL5 chr10 114168180 + Exonic hg19 LUAD TCGA-44-7662-01A 179 136 In-Frame Intra-chr q25.2 q25.2 Seq+ 76485 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC6-CTIF ZDHHC6 chr10 114198094 - CTIF chr18 46343592 + Exonic hg19 BRCA TCGA-A8-A07C-01A 12 16 In-Frame Inter-chr q25.2 Seq+ 76486 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC6-TCF7L2 ZDHHC6 chr10 114194055 - TCF7L2 chr10 114900943 + Exonic hg19 STAD TCGA-CG-4449-01A 5 9 In-Frame Intra-chr q25.2 q25.2 Oncogene Tumor suppressor gene Transcription factor 76487 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC7-ACAD11 ZDHHC7 chr16 85044892 - ACAD11 chr3 132350323 - Exonic hg19 UCS TCGA-N8-A56S-01A 4 5 5'UTR-CDS Inter-chr q24.1 q22.1 Seq+ 76488 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC7-USP10 ZDHHC7 chr16 85011530 - USP10 chr16 84792322 + Exonic hg19 SKCM TCGA-EB-A4XL-01A 75 35 In-Frame Intra-chr q24.1 q24.1 Seq+ 76489 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZDHHC9-SLCO1A2 ZDHHC9 chrX 128977235 - SLCO1A2 chr12 21487643 - Exonic hg19 SKCM TCGA-GN-A26D-06A 116 42 5'UTR-5'UTR Inter-chr q26.1 p12.1 Seq+ 76490 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZEB1-SYT1 ZEB1 chr10 31608221 - SYT1 chr12 79258778 + Exonic hg19 SARC TCGA-DX-A6BG-01A 3 3 5'UTR-5'UTR Inter-chr p11.22 Transcription factor q21.2 Seq+ 76491 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZEB1-ZNF438 ZEB1 chr10 31608221 - ZNF438 chr10 31165994 - Exonic hg19 MESO TCGA-TS-A8AI-01A 2 3 5'UTR-5'UTR Intra-chr p11.22 Transcription factor p11.23 Transcription factor Seq+ 76492 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZEB2-AKT3 ZEB2 chr2 145182363 - AKT3 chr1 243708899 - Exonic hg19 SKCM TCGA-ER-A197-06A 23 20 Out-of-frame Inter-chr q22.3 Transcription factor AGC:Akt Oncogene Seq+ 76493 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZER1-TBC1D13 ZER1 chr9 131533860 - TBC1D13 chr9 131550613 + Exonic hg19 BRCA TCGA-E2-A158-01A 5 5 5'UTR-CDS Intra-chr q34.11 q34.11 76494 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFAND1-STAU2 ZFAND1 chr8 82644434 - STAU2 chr8 74334937 - Exonic hg19 BRCA TCGA-UU-A93S-01A 13 21 5'UTR-CDS Intra-chr q21.13 q21.11 Seq+ 76495 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFAND2A-PHF14 ZFAND2A chr7 1199600 - PHF14 chr7 11209043 + Exonic hg19 SKCM TCGA-ER-A3EV-06A 18 27 5'UTR-5'UTR Intra-chr p22.3 p21.3 Seq+ 76496 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFAND2B-CYP27A1 ZFAND2B chr2 220071764 - CYP27A1 chr2 219674300 + Exonic hg19 STAD TCGA-BR-7197-01A 3 11 Out-of-frame Intra-chr q35 q35 Seq+ 76497 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFAND3-AL353597.1 ZFAND3 chr6 37897775 - AL353597.1 chr6 37502052 + Exonic hg19 LUSC TCGA-39-5034-01A 6 4 Out-of-frame Intra-chr p21.2 p21.2 76498 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFAND3-C6orf89 ZFAND3 chr6 37787792 - C6orf89 chr6 36869997 + Exonic hg19 BRCA TCGA-A2-A4S1-01A 8 11 Out-of-frame Intra-chr p21.2 p21.2 Seq+ 76499 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFAND3-KCTD20 ZFAND3 chr6 37897775 - KCTD20 chr6 36447368 + Exonic hg19 BRCA TCGA-AN-A0AT-01A 7 5 Out-of-frame Intra-chr p21.2 p21.31 76500 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFAND3-MDGA1 ZFAND3 chr6 38084515 - MDGA1 chr6 37631882 - Exonic hg19 STAD TCGA-BR-4357-01A 5 6 In-Frame Intra-chr p21.2 p21.2 Seq+ 76501 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFAND3-POLR1C ZFAND3 chr6 37897775 - POLR1C chr6 43485044 + Exonic hg19 LIHC TCGA-BC-A10T-01A 7 3 Out-of-frame Intra-chr p21.2 p21.1 Seq+ 76502 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFAND3-RNF8 ZFAND3 chr6 37787792 - RNF8 chr6 37328222 + Exonic hg19 BRCA TCGA-PE-A5DC-01A 9 8 Out-of-frame Intra-chr p21.2 p21.2 Tumor suppressor gene Seq+ 76503 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFAND3-RPTOR ZFAND3 chr6 37787792 - RPTOR chr17 78865520 + Exonic hg19 SKCM TCGA-EE-A29L-06A 17 13 Out-of-frame Inter-chr p21.2 q25.3 Seq+ 76504 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFAND3-UBQLN1 ZFAND3 chr6 37897775 - UBQLN1 chr9 86301070 - Exonic hg19 LUSC TCGA-43-7657-01A 12 8 Out-of-frame Inter-chr p21.2 q21.32 Seq+ 76505 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFAND6-KCNRG ZFAND6 chr15 80390920 - KCNRG chr13 50594350 + Exonic hg19 SKCM TCGA-D3-A2J6-06A 50 29 5'UTR-CDS Inter-chr q25.1 q14.2 Tumor suppressor gene Seq+ 76506 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFAT-RP11-240B13.2 ZFAT chr8 135725088 - RP11-240B13.2 chr8 133058130 - Exonic hg19 PRAD TCGA-V1-A9O5-06A 6 6 Out-of-frame Intra-chr q24.22 Transcription factor 76507 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFAT-TG ZFAT chr8 135577576 - TG chr8 134144056 + Exonic hg19 BRCA TCGA-AO-A0JE-01A 6 5 Out-of-frame Intra-chr q24.22 Transcription factor q24.22 Seq+ 76508 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFC3H1-CDH4 ZFC3H1 chr12 72013095 - CDH4 chr20 60427810 + Exonic hg19 BRCA TCGA-A1-A0SJ-01A 5 5 Out-of-frame Inter-chr q21.1 q13.33 Tumor suppressor gene Seq+ 76509 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFC3H1-MON2 ZFC3H1 chr12 72050665 - MON2 chr12 62972225 + Exonic hg19 SARC TCGA-DX-A1L0-01A 79 68 Out-of-frame Intra-chr q21.1 q14.1 Seq+ 76510 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFC3H1-PPFIA2 ZFC3H1 chr12 72036216 - PPFIA2 chr12 81851645 - Exonic hg19 BLCA TCGA-UY-A9PB-01A 2 1 Out-of-frame Intra-chr q21.1 q21.31 76511 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFC3H1-SHISA9 ZFC3H1 chr12 72036216 - SHISA9 chr16 13297251 + Exonic hg19 BRCA TCGA-AC-A7VB-01A 4 1 In-Frame Inter-chr q21.1 p13.12 Seq+ 76512 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFHX3-ALS2CR11 ZFHX3 chr16 72984368 - ALS2CR11 chr2 202440049 - Exonic hg19 PRAD TCGA-HC-7232-01A 10 6 In-Frame Inter-chr q22.3 Tumor suppressor gene Transcription factor Seq+ 76513 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFHX3-ARL15 ZFHX3 chr16 72816784 - ARL15 chr5 53183213 - Exonic hg19 PRAD TCGA-G9-7510-01A 2 1 Out-of-frame Inter-chr q22.3 Tumor suppressor gene Transcription factor q11.2 76514 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFHX3-C16orf47 ZFHX3 chr16 72863678 - C16orf47 chr16 73177730 - Exonic hg19 PRAD TCGA-KK-A5A1-01A 4 1 Out-of-frame Intra-chr q22.3 Tumor suppressor gene Transcription factor q22.3 Seq+ 76515 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFHX3-ENY2 ZFHX3 chr16 72845476 - ENY2 chr8 110355634 + Exonic hg19 PRAD TCGA-YL-A9WL-01A 350 268 Out-of-frame Inter-chr q22.3 Tumor suppressor gene Transcription factor q23.1 Seq+ 76516 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFHX3-IL34 ZFHX3 chr16 72984368 - IL34 chr16 70680451 + Exonic hg19 CESC TCGA-VS-A8EC-01A 4 2 CDS-5'UTR Intra-chr q22.3 Tumor suppressor gene Transcription factor q22.1 Seq+ 76517 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFHX3-WWP2 ZFHX3 chr16 73081651 - WWP2 chr16 69874029 + Exonic hg19 LUSC TCGA-96-A4JL-01A 9 4 5'UTR-CDS Intra-chr q22.3 Tumor suppressor gene Transcription factor q22.1 Seq+ 76518 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFHX3-ZMAT4 ZFHX3 chr16 72845476 - ZMAT4 chr8 40438780 - Exonic hg19 PRAD TCGA-G9-7522-01A 10 3 Out-of-frame Inter-chr q22.3 Tumor suppressor gene Transcription factor p11.21 Transcription factor Seq+ 76519 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFHX3-ZNF821 ZFHX3 chr16 72923630 - ZNF821 chr16 71901940 - Exonic hg19 PRAD TCGA-M7-A725-01A 59 36 In-Frame Intra-chr q22.3 Tumor suppressor gene Transcription factor q22.2 Transcription factor Seq+ 76520 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFHX4-TRAM1 ZFHX4 chr8 77690675 - TRAM1 chr8 71487240 - Exonic hg19 SARC TCGA-DX-A6YX-01A 38 22 In-Frame Intra-chr q21.13 Transcription factor q13.3 Seq+ 76521 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFHX4-VRK1 ZFHX4 chr8 77620283 - VRK1 chr14 97397668 + Exonic hg19 LUSC TCGA-34-5236-01A 6 12 Out-of-frame Inter-chr q21.13 Transcription factor q32.2 CK1:VRK Seq+ 76522 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFP106-GPR115 ZFP106 chr15 42713259 - GPR115 chr6 47688945 + Exonic hg19 KIRP TCGA-F9-A7Q0-01A 81 64 CDS-3'UTR Inter-chr 76523 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFP28-SLC9A8 ZFP28 chr19 57061974 - SLC9A8 chr20 48456078 + Exonic hg19 BRCA TCGA-C8-A273-01A 8 15 In-Frame Inter-chr q13.43 Transcription factor q13.13 Seq+ 76524 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFP3-ARRB2 ZFP3 chr17 4981870 - ARRB2 chr17 4620512 + Exonic hg19 UCS TCGA-N9-A4Q8-01A 80 40 5'UTR-5'UTR Intra-chr p13.2 Transcription factor p13.2 Seq+ 76525 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFP3-DGCR2 ZFP3 chr17 4981870 - DGCR2 chr22 19055738 - Exonic hg19 SARC TCGA-X9-A971-01A 8 4 5'UTR-CDS Inter-chr p13.2 Transcription factor q11.21 Seq+ 76526 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFP30-C19orf33 ZFP30 chr19 38134166 - C19orf33 chr19 38795015 + Exonic hg19 UCEC TCGA-AJ-A3BD-01A 94 90 In-Frame Intra-chr q13.12 Transcription factor q13.2 Seq+ 76527 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFP30-CEACAM7 ZFP30 chr19 38135511 - CEACAM7 chr19 42191152 - Exonic hg19 BLCA TCGA-DK-A3X2-01A 38 14 In-Frame Intra-chr q13.12 Transcription factor Seq+ 76528 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFP30-PRX ZFP30 chr19 38145613 - PRX chr19 40914290 - Exonic hg19 BRCA TCGA-OL-A66P-01A 5 1 5'UTR-5'UTR Intra-chr q13.12 Transcription factor q13.2 Seq+ 76529 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFP41-ANGPT1 ZFP41 chr8 144333510 - ANGPT1 chr8 108334356 - Exonic hg19 BRCA TCGA-C8-A12P-01A 5 1 3'UTR-CDS Intra-chr q24.3 Transcription factor q23.1 Seq+ 76530 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFP41-LGR5 ZFP41 chr8 144329312 - LGR5 chr12 71946853 + Exonic hg19 SARC TCGA-DX-A1KZ-01A 7 1 5'UTR-CDS Inter-chr q24.3 Transcription factor q21.1 76531 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFP64-CSE1L ZFP64 chr20 50808130 - CSE1L chr20 47700563 + Exonic hg19 STAD TCGA-RD-A8MW-01A 19 115 Out-of-frame Intra-chr q13.2 Transcription factor q13.13 Seq+ 76532 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFP91-LPXN ZFP91 chr11 58347095 - LPXN chr11 58338186 - Exonic hg19 BRCA TCGA-A7-A5ZV-01A 23 10 Out-of-frame Intra-chr q12.1 Transcription factor q12.1 Seq+ 76533 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFP91-NOX4 ZFP91 chr11 58352357 - NOX4 chr11 89088211 - Exonic hg19 BRCA TCGA-A1-A0SJ-01A 8 6 In-Frame Intra-chr q12.1 Transcription factor q14.3 Seq+ 76534 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFP91-RAB6A ZFP91 chr11 58352357 - RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-A8-A06O-01A 12 11 Out-of-frame Intra-chr q12.1 Transcription factor q13.4 Seq+ 76535 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFP91-RAB6A ZFP91 chr11 58352357 - RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-A8-A076-01A 6 14 Out-of-frame Intra-chr q12.1 Transcription factor q13.4 Seq+ 76536 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFP91-RAB6A ZFP91 chr11 58352357 - RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-A8-A07P-01A 11 23 Out-of-frame Intra-chr q12.1 Transcription factor q13.4 Seq+ 76537 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFP91-RAB6A ZFP91 chr11 58352357 - RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-A8-A086-01A 12 19 Out-of-frame Intra-chr q12.1 Transcription factor q13.4 Seq+ 76538 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFP91-RAB6A ZFP91 chr11 58352357 - RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-A8-A08J-01A 6 18 Out-of-frame Intra-chr q12.1 Transcription factor q13.4 Seq+ 76539 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFP91-RAB6A ZFP91 chr11 58352357 - RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-A8-A092-01A 6 11 Out-of-frame Intra-chr q12.1 Transcription factor q13.4 Seq+ 76540 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFP91-RAB6A ZFP91 chr11 58352357 - RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-A8-A093-01A 109 196 Out-of-frame Intra-chr q12.1 Transcription factor q13.4 Seq+ 76541 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFP91-RAB6A ZFP91 chr11 58352357 - RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-A8-A09C-01A 10 14 Out-of-frame Intra-chr q12.1 Transcription factor q13.4 Seq+ 76542 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFP91-RAB6A ZFP91 chr11 58352357 - RAB6A chr11 73390765 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 6 9 Out-of-frame Intra-chr q12.1 Transcription factor q13.4 Seq+ 76543 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFPM2-ANXA13 ZFPM2 chr8 106646585 - ANXA13 chr8 124693599 - Exonic hg19 HNSC TCGA-MZ-A5BI-01A 45 47 Out-of-frame Intra-chr q22.3 Transcription factor q24.13 Seq+ 76544 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFPM2-RP11-127H5.1 ZFPM2 chr8 106801152 - RP11-127H5.1 chr8 105727074 + Exonic hg19 UCS TCGA-NG-A4VU-01A 2 1 Out-of-frame Intra-chr q22.3 Transcription factor 76545 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFPM2-SLC27A2 ZFPM2 chr8 106331209 - SLC27A2 chr15 50489697 + Exonic hg19 SARC TCGA-DX-A8BX-01A 12 15 In-Frame Inter-chr q22.3 Transcription factor q21.2 Seq+ 76546 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFR-PLEKHG4B ZFR chr5 32379221 - PLEKHG4B chr5 181629 + Exonic hg19 HNSC TCGA-BA-A8YP-01A 15 9 Out-of-frame Intra-chr p13.3 p15.33 Seq+ 76547 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFR-SND1 ZFR chr5 32444335 - SND1 chr7 127527955 + Exonic hg19 OV TCGA-24-1470-01A 9 5 In-Frame Inter-chr p13.3 q32.1 Seq+ 76548 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFR-TARS ZFR chr5 32444335 - TARS chr5 33441152 + Exonic hg19 BRCA TCGA-AR-A0TW-01A 9 1 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 76549 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFX-GLYATL2 ZFX chrX 24170947 - GLYATL2 chr11 58607125 - Exonic hg19 COAD TCGA-CM-6172-01A 104 6 5'UTR-5'UTR Inter-chr p22.11 Transcription factor q12.1 Seq+ 76550 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFX-KLHL15 ZFX chrX 24227157 - KLHL15 chrX 24007147 - Exonic hg19 BRCA TCGA-BH-A1EX-01A 46 24 In-Frame Intra-chr p22.11 Transcription factor p22.11 Seq+ 76551 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFYVE1-CEP128 ZFYVE1 chr14 73490734 - CEP128 chr14 81046767 - Exonic hg19 SARC TCGA-DX-A1L0-01A 2 1 Out-of-frame Intra-chr q24.2 q31.1 76552 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFYVE1-DENND4A ZFYVE1 chr14 73459851 - DENND4A chr15 65998562 - Exonic hg19 LGG TCGA-DU-A7TD-01A 3 2 In-Frame Inter-chr q24.2 q22.31 Seq+ 76553 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFYVE16-BDP1 ZFYVE16 chr5 79735851 - BDP1 chr5 70848943 + Exonic hg19 STAD TCGA-CG-4449-01A 3 2 Out-of-frame Intra-chr q14.1 76554 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFYVE26-NR6A1 ZFYVE26 chr14 68228083 - NR6A1 chr9 127300598 - Exonic hg19 CESC TCGA-HM-A6W2-06A 2 1 Out-of-frame Inter-chr q24.1 q33.3 Transcription factor 76555 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFYVE26-RAD51B ZFYVE26 chr14 68283251 - RAD51B chr14 68878141 + Exonic hg19 BRCA TCGA-A8-A094-01A 3 9 5'UTR-CDS Intra-chr q24.1 q24.1 Seq+ 76556 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFYVE26-RBM25 ZFYVE26 chr14 68282487 - RBM25 chr14 73554709 + Exonic hg19 BLCA TCGA-K4-A4AC-01A 2 2 Out-of-frame Intra-chr q24.1 q24.2 Seq+ 76557 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFYVE28-CCDC149 ZFYVE28 chr4 2420012 - CCDC149 chr4 24878319 - Exonic hg19 LGG TCGA-DH-A669-01A 7 8 In-Frame Intra-chr p16.3 p15.2 Seq+ 76558 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFYVE28-CRMP1 ZFYVE28 chr4 2420012 - CRMP1 chr4 5858034 - Exonic hg19 SARC TCGA-X6-A8C5-01A 14 9 Out-of-frame Intra-chr p16.3 p16.2 Seq+ 76559 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZFYVE9-ECHDC2 ZFYVE9 chr1 52769597 - ECHDC2 chr1 53364896 - Exonic hg19 SARC TCGA-DX-A23U-01A 2 1 In-Frame Intra-chr p32.3 p32.3 Seq+ 76560 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZGPAT-C20orf152 ZGPAT chr20 62340516 - C20orf152 chr20 34575317 + Exonic hg19 BRCA TCGA-E2-A105-01A 32 26 In-Frame Intra-chr q13.33 Transcription factor Seq+ 76561 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZHX1-ATAD2 ZHX1 chr8 124286362 - ATAD2 chr8 124351686 - Exonic hg19 LUAD TCGA-55-A48Y-01A 11 6 5'UTR-CDS Intra-chr q24.13 Transcription factor q24.13 76562 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZHX1-RALYL ZHX1 chr8 124286457 - RALYL chr8 85686814 + Exonic hg19 LUAD TCGA-05-4422-01A 60 55 5'UTR-CDS Intra-chr q24.13 Transcription factor q21.2 Seq+ 76563 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZHX2-LELP1 ZHX2 chr8 123794185 - LELP1 chr1 153177163 + Exonic hg19 LUSC TCGA-98-8023-01A 52 7 5'UTR-5'UTR Inter-chr q24.13 Tumor suppressor gene Transcription factor q21.3 Seq+ 76564 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZHX2-PPM1B ZHX2 chr8 123794185 - PPM1B chr2 44428325 + Exonic hg19 UCS TCGA-N8-A56S-01A 6 7 5'UTR-5'UTR Inter-chr q24.13 Tumor suppressor gene Transcription factor p21 Seq+ 76565 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZHX3-CHD6 ZHX3 chr20 39830697 - CHD6 chr20 40034129 - Exonic hg19 LIHC TCGA-DD-A73B-01A 15 8 Out-of-frame Intra-chr q12 Transcription factor q12 Seq+ 76566 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZHX3-SMG9 ZHX3 chr20 39897630 - SMG9 chr19 44242369 - Exonic hg19 MESO TCGA-TS-A7P7-01A 20 17 5'UTR-CDS Inter-chr q12 Transcription factor q13.31 Seq+ 76567 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZKSCAN1-CCDC136 ZKSCAN1 chr7 99613349 - CCDC136 chr7 128444704 + Exonic hg19 BRCA TCGA-GM-A2DD-01A 8 3 5'UTR-CDS Intra-chr q22.1 Transcription factor q32.1 Tumor suppressor gene Seq+ 76568 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZKSCAN5-SMO ZKSCAN5 chr7 99110214 - SMO chr7 128843225 + Exonic hg19 BRCA TCGA-AR-A0U4-01A 28 11 In-Frame Intra-chr q22.1 Transcription factor q32.1 Oncogene Seq+ 76569 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMAT3-TP63 ZMAT3 chr3 178785271 - TP63 chr3 189455529 + Exonic hg19 SKCM TCGA-GF-A769-01A 16 13 Out-of-frame Intra-chr q26.32 q28 Tumor suppressor gene Transcription factor Seq+ 76570 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMAT4-ELP3 ZMAT4 chr8 40532223 - ELP3 chr8 28047166 + Exonic hg19 PRAD TCGA-YL-A9WY-01A 2 2 In-Frame Intra-chr p11.21 Transcription factor p21.1 76571 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMAT5-ASCC2 ZMAT5 chr22 30162861 - ASCC2 chr22 30186537 - Exonic hg19 GBM TCGA-41-2572-01A 18 83 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 76572 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMAT5-HIRA ZMAT5 chr22 30134319 - HIRA chr22 19319079 - Exonic hg19 LUSC TCGA-85-8048-01A 5 5 Out-of-frame Intra-chr q12.2 q11.21 Tumor suppressor gene Seq+ 76573 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMIZ1-ADK ZMIZ1 chr10 80829027 - ADK chr10 76468079 + Exonic hg19 UCS TCGA-NA-A4QV-01A 15 42 5'UTR-CDS Intra-chr q22.3 q22.2 Seq+ 76574 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMIZ1-BTD ZMIZ1 chr10 80921890 - BTD chr3 15676931 + Exonic hg19 SKCM TCGA-ER-A3EV-06A 31 7 5'UTR-CDS Inter-chr q22.3 p25.1 Seq+ 76575 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMIZ1-C10orf11 ZMIZ1 chr10 80878781 - C10orf11 chr10 77795766 + Exonic hg19 UCEC TCGA-5B-A90C-01A 85 37 5'UTR-CDS Intra-chr q22.3 Seq+ 76576 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMIZ1-C22orf40 ZMIZ1 chr10 80921890 - C22orf40 chr22 46641135 - Exonic hg19 BRCA TCGA-E9-A1RH-01A 22 4 5'UTR-CDS Inter-chr q22.3 76577 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMIZ1-CHST3 ZMIZ1 chr10 80878781 - CHST3 chr10 73765494 + Exonic hg19 SARC TCGA-DX-A23Z-01A 7 1 5'UTR-5'UTR Intra-chr q22.3 q22.1 76578 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMIZ1-CPEB3 ZMIZ1 chr10 80976031 - CPEB3 chr10 93904869 - Exonic hg19 UCEC TCGA-5B-A90C-01A 3 3 In-Frame Intra-chr q22.3 q23.32 Seq+ 76579 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMIZ1-DENND2A ZMIZ1 chr10 80976031 - DENND2A chr7 140302342 - Exonic hg19 PRAD TCGA-CH-5752-01A 2 2 CDS-5'UTR Inter-chr q22.3 q34 Seq+ 76580 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMIZ1-NSMCE4A ZMIZ1 chr10 80976031 - NSMCE4A chr10 123733596 - Exonic hg19 BRCA TCGA-GI-A2C9-01A 35 22 In-Frame Intra-chr q22.3 q26.13 Seq+ 76581 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMIZ1-XYLT2 ZMIZ1 chr10 80976031 - XYLT2 chr17 48430991 + Exonic hg19 SKCM TCGA-D3-A3C7-06A 2 1 Out-of-frame Inter-chr q22.3 q21.33 76582 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMIZ1-ZCCHC24 ZMIZ1 chr10 80976031 - ZCCHC24 chr10 81192514 - Exonic hg19 PRAD TCGA-HC-7077-01A 6 3 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 76583 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMPSTE24-TMCO2 ZMPSTE24 chr1 40734207 - TMCO2 chr1 40716955 + Exonic hg19 COAD TCGA-A6-5660-01A 150 77 In-Frame Intra-chr p34.2 p34.2 Seq+ 76584 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMPSTE24-TMCO2 ZMPSTE24 chr1 40733544 - TMCO2 chr1 40716955 + Exonic hg19 UCEC TCGA-AJ-A3BD-01A 2 1 In-Frame Intra-chr p34.2 p34.2 Seq+ 76585 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMYM2-DMRT2 ZMYM2 chr13 20611049 - DMRT2 chr9 1051570 + Exonic hg19 LUSC TCGA-66-2744-01A 10 7 CDS-5'UTR Inter-chr q12.11 p24.3 Transcription factor Seq+ 76586 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMYM2-KIAA0564 ZMYM2 chr13 20534166 - KIAA0564 chr13 42486304 - Exonic hg19 LUAD TCGA-78-8662-01A 2 3 5'UTR-CDS Intra-chr q12.11 76587 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMYM2-MPHOSPH8 ZMYM2 chr13 20534166 - MPHOSPH8 chr13 20216255 + Exonic hg19 SARC TCGA-WK-A8XX-01A 12 13 5'UTR-CDS Intra-chr q12.11 q12.11 76588 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMYM2-MTMR6 ZMYM2 chr13 20534166 - MTMR6 chr13 25842079 - Exonic hg19 BRCA TCGA-C8-A12M-01A 2 11 5'UTR-CDS Intra-chr q12.11 q12.13 Seq+ 76589 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMYM4-BSDC1 ZMYM4 chr1 35791006 - BSDC1 chr1 32852496 - Exonic hg19 COAD TCGA-A6-5664-01A 4 4 Out-of-frame Intra-chr p34.3 p35.1 Seq+ 76590 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMYM4-SMYD3 ZMYM4 chr1 35827390 - SMYD3 chr1 246093239 - Exonic hg19 SKCM TCGA-DA-A1I7-06A 14 15 In-Frame Intra-chr p34.3 q44 Transcription factor Seq+ 76591 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMYM4-UTP11L ZMYM4 chr1 35791006 - UTP11L chr1 38488371 + Exonic hg19 BRCA TCGA-AR-A2LR-01A 20 16 Out-of-frame Intra-chr p34.3 Seq+ 76592 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMYM5-IFT88 ZMYM5 chr13 20425495 - IFT88 chr13 21215429 + Exonic hg19 LUAD TCGA-78-7154-01A 9 4 In-Frame Intra-chr q12.11 q12.11 Tumor suppressor gene Seq+ 76593 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMYND11-CDH18 ZMYND11 chr10 267296 - CDH18 chr5 20255614 - Exonic hg19 BLCA TCGA-FD-A43P-01A 4 7 Out-of-frame Inter-chr p15.3 Tumor suppressor gene p14.3 Seq+ 76594 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMYND11-LYZL1 ZMYND11 chr10 181499 - LYZL1 chr10 29599039 + Exonic hg19 PRAD TCGA-HC-7818-01A 3 25 5'UTR-CDS Intra-chr p15.3 Tumor suppressor gene p12.1 Seq+ 76595 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMYND11-PCDH15 ZMYND11 chr10 226068 - PCDH15 chr10 55849823 - Exonic hg19 STAD TCGA-BR-7716-01A 4 30 Out-of-frame Intra-chr p15.3 Tumor suppressor gene q21.1 Seq+ 76596 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMYND11-SORBS2 ZMYND11 chr10 293406 - SORBS2 chr4 186515089 - Exonic hg19 LGG TCGA-DH-A669-01A 99 29 In-Frame Inter-chr p15.3 Tumor suppressor gene q35.1 Seq+ 76597 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMYND11-SORBS2 ZMYND11 chr10 293406 - SORBS2 chr4 186515089 - Exonic hg19 LGG TCGA-DH-A669-02A 9 7 In-Frame Inter-chr p15.3 Tumor suppressor gene q35.1 Seq+ 76598 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMYND19-ARRDC1 ZMYND19 chr9 140481419 - ARRDC1 chr9 140507348 + Exonic hg19 THCA TCGA-EM-A2P3-01A 24 22 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 76599 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMYND8-CELF5 ZMYND8 chr20 45976600 - CELF5 chr19 3250983 + Exonic hg19 BRCA TCGA-E2-A1LL-01A 6 1 In-Frame Inter-chr q13.12 p13.3 Seq+ 76600 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMYND8-EYA2 ZMYND8 chr20 45874752 - EYA2 chr20 45717878 + Exonic hg19 OV TCGA-04-1365-01A 21 19 In-Frame Intra-chr q13.12 q13.12 Seq+ 76601 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMYND8-EYA2 ZMYND8 chr20 45852970 - EYA2 chr20 45700824 + Exonic hg19 UCEC TCGA-B5-A5OE-01A 3 5 In-Frame Intra-chr q13.12 q13.12 Seq+ 76602 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMYND8-GTPBP1 ZMYND8 chr20 45848909 - GTPBP1 chr22 39111912 + Exonic hg19 BRCA TCGA-EW-A1PF-01A 92 104 In-Frame Inter-chr q13.12 q13.1 Seq+ 76603 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMYND8-MN1 ZMYND8 chr20 45976600 - MN1 chr22 28147084 - Exonic hg19 BRCA TCGA-BH-A0H7-01A 9 6 In-Frame Inter-chr q13.12 q12.1 Oncogene 76604 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMYND8-PITPNB ZMYND8 chr20 45976600 - PITPNB chr22 28202607 - Exonic hg19 BRCA TCGA-BH-A0H7-01A 15 4 CDS-3'UTR Inter-chr q13.12 q12.1 76605 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMYND8-RNF43 ZMYND8 chr20 45976600 - RNF43 chr17 56448394 - Exonic hg19 PRAD TCGA-ZG-A9LZ-01A 7 7 Out-of-frame Inter-chr q13.12 q22 Oncogene Seq+ 76606 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMYND8-SPINLW1-WFDC6 ZMYND8 chr20 45905058 - SPINLW1-WFDC6 chr20 44171506 - Exonic hg19 PRAD TCGA-HC-7818-01A 6 1 Out-of-frame Intra-chr q13.12 76607 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMYND8-SULF2 ZMYND8 chr20 45976600 - SULF2 chr20 46319039 - Exonic hg19 OV TCGA-09-1673-01A 202 26 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 76608 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMYND8-SULF2 ZMYND8 chr20 45976600 - SULF2 chr20 46331414 - Exonic hg19 UCEC TCGA-AX-A3GI-01A 4 5 In-Frame Intra-chr q13.12 q13.12 Seq+ 76609 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMYND8-TFE3 ZMYND8 chr20 45849965 - TFE3 chrX 48896935 - Exonic hg19 UCEC TCGA-B5-A3FB-01A 19 4 Out-of-frame Inter-chr q13.12 p11.23 Oncogene Transcription factor Seq+ 76610 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZMYND8-ZC4H2 ZMYND8 chr20 45976600 - ZC4H2 chrX 64185810 - Exonic hg19 BRCA TCGA-BH-A0C0-01A 2 1 CDS-5'UTR Inter-chr q13.12 q11.2 76611 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF10-SPATA17 ZNF10 chr12 133707340 - SPATA17 chr1 218036116 + Exonic hg19 PRAD TCGA-HC-7077-01A 58 28 5'UTR-CDS Inter-chr q24.33 Transcription factor q41 Seq+ 76612 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF100-GIPC1 ZNF100 chr19 21948496 - GIPC1 chr19 14603724 - Exonic hg19 LUAD TCGA-44-7669-01A 2 2 CDS-5'UTR Intra-chr p12 Transcription factor p13.12 76613 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF107-FAM83D ZNF107 chr7 64152338 - FAM83D chr20 37570602 + Exonic hg19 BRCA TCGA-AO-A03O-01A 10 14 Out-of-frame Inter-chr q11.21 Transcription factor q11.23 Seq+ 76614 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF114-ETHE1 ZNF114 chr19 48775085 - ETHE1 chr19 44015718 - Exonic hg19 UCS TCGA-N5-A4R8-01A 27 18 5'UTR-CDS Intra-chr q13.33 Transcription factor q13.31 Seq+ 76615 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF121-OLFM2 ZNF121 chr19 9695137 - OLFM2 chr19 9971470 - Exonic hg19 BRCA TCGA-D8-A1XU-01A 39 48 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.2 Seq+ 76616 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF131-GHR ZNF131 chr5 43068319 - GHR chr5 42688992 + Exonic hg19 SARC TCGA-X6-A7WC-01A 3 3 5'UTR-CDS Intra-chr p12 Transcription factor p13.1 Seq+ 76617 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF133-MS4A4A ZNF133 chr20 18269248 - MS4A4A chr11 60059698 + Exonic hg19 LGG TCGA-S9-A89V-01A 7 13 5'UTR-5'UTR Inter-chr p11.23 Transcription factor q12.2 Seq+ 76618 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF134-RYR1 ZNF134 chr19 58125871 - RYR1 chr19 39033987 + Exonic hg19 SKCM TCGA-ER-A3ET-06A 7 4 5'UTR-CDS Intra-chr q13.43 Transcription factor q13.2 Seq+ 76619 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF136-XAB2 ZNF136 chr19 12274021 - XAB2 chr19 7693184 - Exonic hg19 SKCM TCGA-DA-A1I0-06A 24 56 In-Frame Intra-chr p13.2 Transcription factor p13.2 Seq+ 76620 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF14-RGL3 ZNF14 chr19 19843765 - RGL3 chr19 11513382 - Exonic hg19 BRCA TCGA-E9-A295-01A 5 3 In-Frame Intra-chr p13.11 Transcription factor p13.2 Seq+ 76621 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF14-STAT5A ZNF14 chr19 19843765 - STAT5A chr17 40447637 + Exonic hg19 LUAD TCGA-86-7953-01A 12 5 In-Frame Inter-chr p13.11 Transcription factor q21.2 Tumor suppressor gene Transcription factor Seq+ 76622 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF142-POLR1B ZNF142 chr2 219523703 - POLR1B chr2 113306844 + Exonic hg19 PRAD TCGA-EJ-A7NN-01A 5 7 5'UTR-CDS Intra-chr q35 Transcription factor q14.1 Seq+ 76623 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF143-IPO7 ZNF143 chr11 9492967 - IPO7 chr11 9462002 + Exonic hg19 BRCA TCGA-E2-A15A-06A 5 6 In-Frame Intra-chr p15.4 Transcription factor p15.4 Seq+ 76624 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF143-TMEM41B ZNF143 chr11 9482623 - TMEM41B chr11 9309353 - Exonic hg19 LUAD TCGA-93-8067-01A 3 14 5'UTR-CDS Intra-chr p15.4 Transcription factor p15.4 Seq+ 76625 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF146-ABCA9 ZNF146 chr19 36709097 - ABCA9 chr17 66992155 - Exonic hg19 SARC TCGA-FX-A2QS-01A 20 8 5'UTR-CDS Inter-chr q13.12 Transcription factor q24.2 Seq+ 76626 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF146-AD000671.1 ZNF146 chr19 36709097 - AD000671.1 chr19 36213261 + Exonic hg19 LGG TCGA-HT-8010-01A 6 2 Out-of-frame Intra-chr q13.12 Transcription factor q13.12 76627 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF146-NCAM2 ZNF146 chr19 36706098 - NCAM2 chr21 22696703 + Exonic hg19 LUAD TCGA-MN-A4N5-01A 11 3 5'UTR-CDS Inter-chr q13.12 Transcription factor q21.1 Tumor suppressor gene Seq+ 76628 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF146-PGPEP1 ZNF146 chr19 36719721 - PGPEP1 chr19 18474201 + Exonic hg19 UCEC TCGA-PG-A914-01A 48 15 5'UTR-CDS Intra-chr q13.12 Transcription factor p13.11 Seq+ 76629 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF148-AGXT ZNF148 chr3 125006947 - AGXT chr2 241810766 + Exonic hg19 UCEC TCGA-DF-A2KR-01A 20 4 In-Frame Inter-chr q21.2 Transcription factor q37.3 Seq+ 76630 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF148-FHAD1 ZNF148 chr3 125006947 - FHAD1 chr1 15689138 + Exonic hg19 BRCA TCGA-B6-A0IJ-01A 9 6 Out-of-frame Inter-chr q21.2 Transcription factor p36.21 Seq+ 76631 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF148-MYLK ZNF148 chr3 125042153 - MYLK chr3 123512691 - Exonic hg19 PRAD TCGA-VN-A88P-01A 2 4 5'UTR-5'UTR Intra-chr q21.2 Transcription factor q21.1 Seq+ 76632 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF148-OSBPL11 ZNF148 chr3 124996570 - OSBPL11 chr3 125257477 - Exonic hg19 CESC TCGA-C5-A7X5-01A 4 1 Out-of-frame Intra-chr q21.2 Transcription factor q21.2 Seq+ 76633 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF148-RPRD2 ZNF148 chr3 125050002 - RPRD2 chr1 150429764 + Exonic hg19 BLCA TCGA-FD-A6TG-01A 9 8 5'UTR-CDS Inter-chr q21.2 Transcription factor q21.2 Seq+ 76634 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF148-SNX4 ZNF148 chr3 125093946 - SNX4 chr3 125223588 - Exonic hg19 CESC TCGA-DS-A3LQ-01A 11 13 5'UTR-CDS Intra-chr q21.2 Transcription factor q21.2 Seq+ 76635 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF148-YPEL2 ZNF148 chr3 124996570 - YPEL2 chr17 57465688 + Exonic hg19 BRCA TCGA-B6-A0WS-01A 3 2 Out-of-frame Inter-chr q21.2 Transcription factor q22 76636 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF16-PLEKHA4 ZNF16 chr8 146171397 - PLEKHA4 chr19 49355583 - Exonic hg19 SARC TCGA-DX-A8BJ-01A 3 3 Out-of-frame Inter-chr q24.3 Transcription factor q13.33 Seq+ 76637 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF169-RP11-371E8.4 ZNF169 chr9 97041127 - RP11-371E8.4 chr14 93676170 + Exonic hg19 BRCA TCGA-E2-A1BD-01A 4 2 Out-of-frame Inter-chr q22.32 Transcription factor 76638 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF175-CYP27B1 ZNF175 chr19 52085135 - CYP27B1 chr12 58158333 - Exonic hg19 LGG TCGA-DU-7010-01A 327 162 Out-of-frame Inter-chr q13.41 Transcription factor q14.1 Seq+ 76639 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF177-DAB1 ZNF177 chr19 9475624 - DAB1 chr1 57611102 - Exonic hg19 UCEC TCGA-AJ-A3NF-01A 13 1 5'UTR-CDS Inter-chr p13.2 Transcription factor p32.1 76640 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF177-RGL3 ZNF177 chr19 9473760 - RGL3 chr19 11517540 - Exonic hg19 SARC TCGA-3B-A9HJ-01A 3 2 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.2 76641 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF177-TECR ZNF177 chr19 9475624 - TECR chr19 14673337 + Exonic hg19 SARC TCGA-X6-A8C5-01A 23 43 5'UTR-5'UTR Intra-chr p13.2 Transcription factor p13.12 Seq+ 76642 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF18-TASP1 ZNF18 chr17 11887430 - TASP1 chr20 13398168 - Exonic hg19 BRCA TCGA-A2-A0SU-01A 4 3 In-Frame Inter-chr p12 Transcription factor p12.1 Seq+ 76643 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF184-CD2AP ZNF184 chr6 27435632 - CD2AP chr6 47501338 + Exonic hg19 BRCA TCGA-AO-A0JG-01A 20 14 In-Frame Intra-chr p22.1 Transcription factor p12.3 Seq+ 76644 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF185-FADS2 ZNF185 chrX 152142015 - FADS2 chr11 61588853 + Exonic hg19 CESC TCGA-VS-A8EG-01A 2 1 Out-of-frame Inter-chr q28 Tumor suppressor gene q12.2 76645 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF189-BAAT ZNF189 chr9 104162292 - BAAT chr9 104133745 - Exonic hg19 LUSC TCGA-18-3415-01A 11 1 CDS-5'UTR Intra-chr q31.1 Transcription factor q31.1 76646 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF189-BAAT ZNF189 chr9 104162292 - BAAT chr9 104133745 - Exonic hg19 LUSC TCGA-J1-A4AH-01A 2 1 CDS-5'UTR Intra-chr q31.1 Transcription factor q31.1 76647 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF192-AC011500.1 ZNF192 chr6 28117402 - AC011500.1 chr19 40010786 + Exonic hg19 SARC TCGA-IE-A3OV-01A 4 1 Out-of-frame Inter-chr q13.2 76648 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF195-FAM160A2 ZNF195 chr11 3400268 - FAM160A2 chr11 6240280 - Exonic hg19 OV TCGA-24-1842-01A 6 17 In-Frame Intra-chr p15.4 Transcription factor p15.4 Seq+ 76649 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF197-TAF3 ZNF197 chr3 44674091 - TAF3 chr10 8005883 + Exonic hg19 LUAD TCGA-69-7761-01A 10 1 In-Frame Inter-chr Transcription factor p14 Seq+ 76650 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF20-DAND5 ZNF20 chr19 12250995 - DAND5 chr19 13084203 + Exonic hg19 OV TCGA-24-1558-01A 58 19 In-Frame Intra-chr p13.2 Transcription factor p13.13 Seq+ 76651 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF200-COLEC12 ZNF200 chr16 3282421 - COLEC12 chr18 480757 - Exonic hg19 LUSC TCGA-60-2712-01A 7 4 In-Frame Inter-chr p13.3 Transcription factor p11.32 Seq+ 76652 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF207-C17orf75 ZNF207 chr17 30678931 - C17orf75 chr17 30661858 - Exonic hg19 BRCA TCGA-B6-A1KN-01A 241 211 In-Frame Intra-chr q11.2 Transcription factor q11.2 Seq+ 76653 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF207-TANC2 ZNF207 chr17 30696764 - TANC2 chr17 61476182 + Exonic hg19 ESCA TCGA-V5-A7RE-01A 18 7 In-Frame Intra-chr q11.2 Transcription factor q23.2 76654 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF212-PDE3B ZNF212 chr7 148947898 - PDE3B chr11 14839729 + Exonic hg19 SKCM TCGA-WE-A8ZM-06A 33 21 In-Frame Inter-chr q36.1 Transcription factor p15.2 Seq+ 76655 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF217-BCAS1 ZNF217 chr20 52210295 - BCAS1 chr20 52675262 - Exonic hg19 STAD TCGA-CG-4443-01A 3 35 5'UTR-5'UTR Intra-chr q13.2 Oncogene Transcription factor q13.2 Seq+ 76656 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF217-BCAS3 ZNF217 chr20 52210295 - BCAS3 chr17 59445688 + Exonic hg19 BRCA TCGA-AQ-A0Y5-01A 175 132 5'UTR-CDS Inter-chr q13.2 Oncogene Transcription factor q23.2 Seq+ 76657 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF217-MAVS ZNF217 chr20 52188260 - MAVS chr20 3841979 + Exonic hg19 ESCA TCGA-IG-A50L-01A 4 29 3'UTR-CDS Intra-chr q13.2 Oncogene Transcription factor p13 Seq+ 76658 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF219-HNRNPC ZNF219 chr14 21566471 - HNRNPC chr14 21702388 - Exonic hg19 BRCA TCGA-B6-A0I6-01A 7 15 5'UTR-5'UTR Intra-chr q11.2 Transcription factor q11.2 Seq+ 76659 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF222-PSG5 ZNF222 chr19 44531642 - PSG5 chr19 43689299 - Exonic hg19 UCEC TCGA-AJ-A3TW-01A 11 4 In-Frame Intra-chr q13.31 Transcription factor q13.31 Seq+ 76660 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF223-AP2A1 ZNF223 chr19 44559344 - AP2A1 chr19 50298887 + Exonic hg19 SARC TCGA-QQ-A8VF-01A 16 9 In-Frame Intra-chr q13.31 Transcription factor q13.33 Seq+ 76661 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF224-CYP2S1 ZNF224 chr19 44602041 - CYP2S1 chr19 41711863 + Exonic hg19 SARC TCGA-DX-A8BU-01A 45 22 In-Frame Intra-chr q13.31 Transcription factor q13.2 Seq+ 76662 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF226-EIF3K ZNF226 chr19 44669960 - EIF3K chr19 39110977 + Exonic hg19 SARC TCGA-DX-A8BL-01A 69 29 5'UTR-CDS Intra-chr q13.31 Transcription factor Seq+ 76663 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF227-HNRNPUL1 ZNF227 chr19 44722005 - HNRNPUL1 chr19 41798150 + Exonic hg19 CESC TCGA-JW-A5VI-01A 491 222 In-Frame Intra-chr q13.31 Transcription factor q13.2 Seq+ 76664 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF229-ERCC1 ZNF229 chr19 44951701 - ERCC1 chr19 45926639 - Exonic hg19 LUAD TCGA-55-6969-01A 15 4 5'UTR-5'UTR Intra-chr q13.31 Transcription factor q13.32 Oncogene Seq+ 76665 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF236-QRSL1 ZNF236 chr18 74563895 - QRSL1 chr6 107088224 + Exonic hg19 SARC TCGA-K1-A42X-01A 30 35 In-Frame Inter-chr q23 Transcription factor q21 Seq+ 76666 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF236-QRSL1 ZNF236 chr18 74563895 - QRSL1 chr6 107088224 + Exonic hg19 SARC TCGA-K1-A42X-02A 42 21 In-Frame Inter-chr q23 Transcription factor q21 Seq+ 76667 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF236-ZNF627 ZNF236 chr18 74593468 - ZNF627 chr19 11725342 + Exonic hg19 HNSC TCGA-CN-4725-01A 3 6 Out-of-frame Inter-chr q23 Transcription factor p13.2 Transcription factor Seq+ 76668 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF239-SEC31B ZNF239 chr10 44063347 - SEC31B chr10 102257037 - Exonic hg19 LGG TCGA-TM-A84J-01A 164 102 5'UTR-CDS Intra-chr q11.21 Transcription factor q24.31 Seq+ 76669 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF24-ACAA2 ZNF24 chr18 32924334 - ACAA2 chr18 47322251 - Exonic hg19 COAD TCGA-D5-6929-01A 56 42 5'UTR-CDS Intra-chr q12.2 Transcription factor q21.1 Seq+ 76670 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF251-CHMP4C ZNF251 chr8 145979068 - CHMP4C chr8 82665299 + Exonic hg19 SARC TCGA-SG-A6Z7-01A 15 10 In-Frame Intra-chr Transcription factor q21.13 Seq+ 76671 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF251-FAHD2B ZNF251 chr8 145979068 - FAHD2B chr2 97757725 - Exonic hg19 BRCA TCGA-AR-A251-01A 2 11 CDS-5'UTR Inter-chr Transcription factor q11.2 Seq+ 76672 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF252-TRAPPC9 ZNF252 chr8 146224989 - TRAPPC9 chr8 141370292 - Exonic hg19 COAD TCGA-CK-5914-01A 5 2 Out-of-frame Intra-chr q24.3 76673 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF252-TSHZ2 ZNF252 chr8 146224989 - TSHZ2 chr20 52103683 + Exonic hg19 LIHC TCGA-BW-A5NP-01A 15 2 Out-of-frame Inter-chr q13.2 Transcription factor 76674 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF253-BAZ1A ZNF253 chr19 19976808 - BAZ1A chr14 35280242 - Exonic hg19 LUAD TCGA-64-1679-01A 12 3 Out-of-frame Inter-chr p13.11 Transcription factor q13.2 Seq+ 76675 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF253-HSD17B14 ZNF253 chr19 19976808 - HSD17B14 chr19 49337615 - Exonic hg19 LGG TCGA-TM-A7CF-01A 3 11 Out-of-frame Intra-chr p13.11 Transcription factor q13.33 Seq+ 76676 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF253-HSD17B14 ZNF253 chr19 19976808 - HSD17B14 chr19 49337615 - Exonic hg19 LGG TCGA-TM-A7CF-02A 3 4 Out-of-frame Intra-chr p13.11 Transcription factor q13.33 Seq+ 76677 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF253-SLC1A6 ZNF253 chr19 19976808 - SLC1A6 chr19 15083729 - Exonic hg19 SKCM TCGA-BF-A5EQ-01A 5 3 Out-of-frame Intra-chr p13.11 Transcription factor p13.12 Seq+ 76678 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF254-TTBK1 ZNF254 chr19 24289445 - TTBK1 chr6 43250465 + Exonic hg19 LUAD TCGA-44-7671-01A 4 2 Out-of-frame Inter-chr p12 Transcription factor p21.1 CK1:TTBK 76679 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF257-TRHDE ZNF257 chr19 22235437 - TRHDE chr12 72863538 + Exonic hg19 BRCA TCGA-AC-A7VB-01A 4 3 Out-of-frame Inter-chr p12 Transcription factor q21.1 Seq+ 76680 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF260-SCGBL ZNF260 chr19 37016057 - SCGBL chr19 35084504 - Exonic hg19 LUAD TCGA-05-4389-01A 46 25 Out-of-frame Intra-chr q13.12 Transcription factor 76681 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF263-KCTD5 ZNF263 chr16 3341460 - KCTD5 chr16 2732498 + Exonic hg19 PRAD TCGA-KK-A8ID-01A 2 4 3'UTR-5'UTR Intra-chr p13.3 Transcription factor p13.3 76682 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF264-PIGG ZNF264 chr19 57705369 - PIGG chr4 514845 + Exonic hg19 LUAD TCGA-50-5930-01A 2 1 In-Frame Inter-chr q13.43 Transcription factor p16.3 Seq+ 76683 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF266-MATK ZNF266 chr19 9544344 - MATK chr19 3784031 - Exonic hg19 UVM TCGA-VD-AA8M-01A 14 14 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.3 Seq+ 76684 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF267-AGBL4 ZNF267 chr16 31885290 - AGBL4 chr1 49332902 - Exonic hg19 BLCA TCGA-CU-A3QU-01A 7 2 In-Frame Inter-chr p11.2 Transcription factor p33 Seq+ 76685 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF267-GPR180 ZNF267 chr16 31896577 - GPR180 chr13 95273332 + Exonic hg19 HNSC TCGA-CV-A465-01A 20 7 In-Frame Inter-chr p11.2 Transcription factor q32.1 Seq+ 76686 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF274-CACNA2D4 ZNF274 chr19 58721439 - CACNA2D4 chr12 1996235 - Exonic hg19 BRCA TCGA-AC-A2FM-01A 46 23 Out-of-frame Inter-chr q13.43 Transcription factor p13.33 Seq+ 76687 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF276-JPH3 ZNF276 chr16 89790117 - JPH3 chr16 87730186 + Exonic hg19 OV TCGA-20-1684-01A 9 2 Out-of-frame Intra-chr q24.3 Transcription factor q24.2 Seq+ 76688 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF276-VAC14 ZNF276 chr16 89795726 - VAC14 chr16 70732714 - Exonic hg19 BLCA TCGA-XF-A9SK-01A 5 1 In-Frame Intra-chr q24.3 Transcription factor q22.2 76689 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF277-CEACAM19 ZNF277 chr7 111846862 - CEACAM19 chr19 45175868 + Exonic hg19 KIRC TCGA-B0-5081-01A 36 16 In-Frame Inter-chr q31.1 Transcription factor q13.31 Seq+ 76690 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF277-IMMP2L ZNF277 chr7 111958328 - IMMP2L chr7 110303777 - Exonic hg19 KIRP TCGA-B9-4116-01A 349 210 Out-of-frame Intra-chr q31.1 Transcription factor q31.1 Seq+ 76691 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF280B-BPIFC ZNF280B chr22 22862128 - BPIFC chr22 32843327 - Exonic hg19 SKCM TCGA-D9-A1JX-06A 22 12 5'UTR-CDS Intra-chr Transcription factor q12.3 Seq+ 76692 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF280D-RNF111 ZNF280D chr15 56935150 - RNF111 chr15 59384736 + Exonic hg19 BRCA TCGA-EW-A423-01A 5 4 In-Frame Intra-chr q21.3 Transcription factor q22.1 Tumor suppressor gene Seq+ 76693 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF282-CUL1 ZNF282 chr7 148910906 - CUL1 chr7 148463653 + Exonic hg19 BRCA TCGA-D8-A1JK-01A 2 1 Out-of-frame Intra-chr q36.1 Transcription factor q36.1 Tumor suppressor gene Seq+ 76694 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF283-DPRX ZNF283 chr19 44341331 - DPRX chr19 54137785 + Exonic hg19 SKCM TCGA-D3-A3CC-06A 15 1 In-Frame Intra-chr q13.31 Transcription factor q13.42 Transcription factor Seq+ 76695 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF292-B3GAT2 ZNF292 chr6 87865477 - B3GAT2 chr6 71603975 - Exonic hg19 BRCA TCGA-D8-A147-01A 11 8 In-Frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q13 Seq+ 76696 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF292-CGA ZNF292 chr6 87865477 - CGA chr6 87797925 - Exonic hg19 BRCA TCGA-D8-A1JK-01A 93 73 CDS-5'UTR Intra-chr q14.3 Tumor suppressor gene Transcription factor q14.3 Seq+ 76697 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF292-EYS ZNF292 chr6 87865477 - EYS chr6 66205886 - Exonic hg19 PRAD TCGA-YL-A8SR-01B 17 11 CDS-5'UTR Intra-chr q14.3 Tumor suppressor gene Transcription factor q12 Seq+ 76698 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF292-FIG4 ZNF292 chr6 87865477 - FIG4 chr6 110098125 + Exonic hg19 BRCA TCGA-AO-A0J2-01A 12 12 Out-of-frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q21 Seq+ 76699 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF292-GRM4 ZNF292 chr6 87865477 - GRM4 chr6 34101636 - Exonic hg19 LGG TCGA-TM-A7CF-01A 3 4 CDS-5'UTR Intra-chr q14.3 Tumor suppressor gene Transcription factor p21.31 Seq+ 76700 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF292-GRM4 ZNF292 chr6 87865477 - GRM4 chr6 34101636 - Exonic hg19 LGG TCGA-TM-A7CF-02A 8 5 CDS-5'UTR Intra-chr q14.3 Tumor suppressor gene Transcription factor p21.31 Seq+ 76701 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF292-MAP3K4 ZNF292 chr6 87865477 - MAP3K4 chr6 161491640 + Exonic hg19 SARC TCGA-DX-A3M1-01A 4 6 In-Frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q26 STE:STE11 Tumor suppressor gene Seq+ 76702 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF292-PRSS54 ZNF292 chr6 87865477 - PRSS54 chr16 58328116 - Exonic hg19 PRAD TCGA-KK-A8IJ-01A 5 1 CDS-5'UTR Inter-chr q14.3 Tumor suppressor gene Transcription factor q21 Seq+ 76703 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF292-PTPRO ZNF292 chr6 87865477 - PTPRO chr12 15652376 + Exonic hg19 PRAD TCGA-HC-7081-01A 6 4 Out-of-frame Inter-chr q14.3 Tumor suppressor gene Transcription factor p12.3 Seq+ 76704 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF295-PFKL ZNF295 chr21 43430361 - PFKL chr21 45726564 + Exonic hg19 KIRC TCGA-CJ-5681-01A 9 20 5'UTR-5'UTR Intra-chr q22.3 76705 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF295-TFF1 ZNF295 chr21 43423006 - TFF1 chr21 43783516 - Exonic hg19 ESCA TCGA-L5-A891-01A 37 83 5'UTR-CDS Intra-chr q22.3 Seq+ 76706 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF3-GATS ZNF3 chr7 99679258 - GATS chr7 99831297 - Exonic hg19 BRCA TCGA-C8-A135-01A 4 4 5'UTR-CDS Intra-chr q22.1 Transcription factor q22.1 Seq+ 76707 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF3-MCM7 ZNF3 chr7 99679258 - MCM7 chr7 99690756 - Exonic hg19 OV TCGA-24-2281-01A 6 20 5'UTR-CDS Intra-chr q22.1 Transcription factor q22.1 Seq+ 76708 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF3-RUNDC3B ZNF3 chr7 99672758 - RUNDC3B chr7 87323224 + Exonic hg19 LUAD TCGA-50-5066-01A 6 3 In-Frame Intra-chr q22.1 Transcription factor q21.12 Seq+ 76709 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF302-ANKRD27 ZNF302 chr19 35169718 - ANKRD27 chr19 33098738 - Exonic hg19 UCEC TCGA-D1-A3JP-01A 2 1 In-Frame Intra-chr q13.11 Transcription factor q13.11 76710 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF302-CACNA1A ZNF302 chr19 35169718 - CACNA1A chr19 13366073 - Exonic hg19 LUAD TCGA-44-2657-01A 2 2 In-Frame Intra-chr q13.11 Transcription factor p13.13 Seq+ 76711 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF311-TTBK1 ZNF311 chr6 28966511 - TTBK1 chr6 43237381 + Exonic hg19 CHOL TCGA-3X-AAVC-01A 14 4 Out-of-frame Intra-chr p22.1 Transcription factor p21.1 CK1:TTBK Seq+ 76712 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF317-AP3D1 ZNF317 chr19 9251268 - AP3D1 chr19 2115612 - Exonic hg19 OV TCGA-13-1405-01A 8 30 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.3 Seq+ 76713 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF318-CD2AP ZNF318 chr6 43336705 - CD2AP chr6 47548600 + Exonic hg19 SARC TCGA-DX-A3LU-01A 70 103 In-Frame Intra-chr p21.1 Transcription factor p12.3 Seq+ 76714 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF318-COL21A1 ZNF318 chr6 43316062 - COL21A1 chr6 55990947 - Exonic hg19 KIRP TCGA-UZ-A9PQ-01A 39 19 In-Frame Intra-chr p21.1 Transcription factor p12.1 Seq+ 76715 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF318-PDE3A ZNF318 chr6 43310414 - PDE3A chr12 20709594 + Exonic hg19 BRCA TCGA-BH-A18T-01A 15 20 In-Frame Inter-chr p21.1 Transcription factor p12.2 Seq+ 76716 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF322-PPIL6 ZNF322 chr6 26658786 - PPIL6 chr6 109721373 - Exonic hg19 BRCA TCGA-E2-A155-01A 4 38 5'UTR-CDS Intra-chr p22.2 Transcription factor q21 Seq+ 76717 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF326-CCDC18 ZNF326 chr1 90460832 - CCDC18 chr1 93691890 + Exonic hg19 BLCA TCGA-2F-A9KR-01A 59 31 Out-of-frame Intra-chr p22.2 Transcription factor p22.1 Seq+ 76718 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF329-EPN1 ZNF329 chr19 58653924 - EPN1 chr19 56189893 + Exonic hg19 PRAD TCGA-HC-7818-01A 27 18 5'UTR-5'UTR Intra-chr q13.43 Transcription factor q13.42 Seq+ 76719 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF331-NLRP11 ZNF331 chr19 54074984 - NLRP11 chr19 56313105 - Exonic hg19 BRCA TCGA-AO-A0JE-01A 12 4 Out-of-frame Intra-chr q13.42 Transcription factor q13.43 Seq+ 76720 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF331-NLRP4 ZNF331 chr19 54025938 - NLRP4 chr19 56363382 + Exonic hg19 LUSC TCGA-60-2706-01A 2 4 5'UTR-5'UTR Intra-chr q13.42 Transcription factor q13.43 76721 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF335-ZSWIM3 ZNF335 chr20 44586225 - ZSWIM3 chr20 44501310 + Exonic hg19 BLCA TCGA-BT-A20J-01A 3 2 CDS-5'UTR Intra-chr q13.12 Transcription factor q13.12 76722 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF33A-PARD3 ZNF33A chr10 38306314 - PARD3 chr10 34558827 - Exonic hg19 LGG TCGA-HT-7690-01A 2 2 Out-of-frame Intra-chr p11.1 Transcription factor p11.21 Seq+ 76723 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF341-CBFA2T2 ZNF341 chr20 32358098 - CBFA2T2 chr20 32232153 + Exonic hg19 LUAD TCGA-86-7953-01A 9 2 Out-of-frame Intra-chr q11.22 Transcription factor q11.21 Seq+ 76724 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF343-PRPSAP2 ZNF343 chr20 2489527 - PRPSAP2 chr17 18827227 + Exonic hg19 LUAD TCGA-97-A4LX-01A 5 18 5'UTR-CDS Inter-chr p13 Transcription factor p11.2 Seq+ 76725 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF345-HSF2BP ZNF345 chr19 37341870 - HSF2BP chr21 45012209 - Exonic hg19 BRCA TCGA-C8-A12P-01A 8 7 5'UTR-CDS Inter-chr q13.12 Transcription factor q22.3 Seq+ 76726 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF345-LGALS13 ZNF345 chr19 37342806 - LGALS13 chr19 40095818 + Exonic hg19 LGG TCGA-TM-A84B-01A 196 139 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.2 Seq+ 76727 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF345-PTPRH ZNF345 chr19 37342806 - PTPRH chr19 55699536 - Exonic hg19 LGG TCGA-TM-A84B-01A 5 2 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.42 Seq+ 76728 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF346-PAOX ZNF346 chr5 176449914 - PAOX chr10 135202460 + Exonic hg19 BRCA TCGA-A2-A0ST-01A 2 4 In-Frame Inter-chr q35.2 Transcription factor q26.3 Seq+ 76729 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF350-SLC12A5 ZNF350 chr19 52477599 - SLC12A5 chr20 44669012 + Exonic hg19 OV TCGA-23-1024-01A 5 2 In-Frame Inter-chr q13.41 Transcription factor q13.12 Seq+ 76730 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF354A-SLC12A7 ZNF354A chr5 178152377 - SLC12A7 chr5 1089243 - Exonic hg19 LUAD TCGA-95-A4VK-01A 12 3 Out-of-frame Intra-chr q35.3 Transcription factor p15.33 Seq+ 76731 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF354C-PRSS3 ZNF354C chr5 178489096 - PRSS3 chr9 33796641 + Exonic hg19 SARC TCGA-DX-A23Y-01A 2 2 Out-of-frame Inter-chr q35.3 Transcription factor p13.3 Seq+ 76732 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF37A-PIP5K1B ZNF37A chr10 38385560 - PIP5K1B chr9 71433377 + Exonic hg19 BRCA TCGA-AR-A2LL-01A 188 172 CDS-5'UTR Inter-chr p11.1 Transcription factor q21.11 Seq+ 76733 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF383-TEX14 ZNF383 chr19 37726976 - TEX14 chr17 56729363 - Exonic hg19 SARC TCGA-FX-A2QS-01A 6 2 CDS-5'UTR Inter-chr q13.12 Transcription factor q22 Seq+ 76734 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF385A-NAV3 ZNF385A chr12 54778212 - NAV3 chr12 78552983 + Exonic hg19 SARC TCGA-DX-A23R-01A 19 6 In-Frame Intra-chr q13.13 Transcription factor q21.2 Seq+ 76735 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF385B-CWC22 ZNF385B chr2 180725828 - CWC22 chr2 180858181 - Exonic hg19 LIHC TCGA-DD-A1EB-01A 2 4 5'UTR-5'UTR Intra-chr q31.3 Transcription factor q31.3 Seq+ 76736 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF385B-FKBP7 ZNF385B chr2 180725828 - FKBP7 chr2 179330658 - Exonic hg19 HNSC TCGA-CV-7235-01A 19 6 5'UTR-CDS Intra-chr q31.3 Transcription factor q31.2 Seq+ 76737 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF385B-SCG5 ZNF385B chr2 180634230 - SCG5 chr15 32935787 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 47 20 CDS-5'UTR Inter-chr q31.3 Transcription factor Seq+ 76738 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF395-SLC25A44 ZNF395 chr8 28243521 - SLC25A44 chr1 156177677 + Exonic hg19 PRAD TCGA-HC-7744-01A 8 10 5'UTR-CDS Inter-chr p21.1 Transcription factor q22 Seq+ 76739 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF398-TPK1 ZNF398 chr7 148844858 - TPK1 chr7 144463044 - Exonic hg19 SARC TCGA-X6-A7WC-01A 2 1 Out-of-frame Intra-chr q36.1 Transcription factor q35 Seq+ 76740 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF407-CYB5A ZNF407 chr18 72353078 - CYB5A chr18 71923010 - Exonic hg19 SARC TCGA-DX-A48N-01A 12 3 Out-of-frame Intra-chr q22.3 Transcription factor q22.3 Tumor suppressor gene Seq+ 76741 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF410-ACOT4 ZNF410 chr14 74390225 - ACOT4 chr14 74060406 + Exonic hg19 UCEC TCGA-A5-A2K2-01A 6 2 Out-of-frame Intra-chr q24.3 Transcription factor q24.3 Seq+ 76742 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF410-ANKS3 ZNF410 chr14 74364965 - ANKS3 chr16 4748063 - Exonic hg19 LIHC TCGA-BC-A3KG-01A 33 22 Out-of-frame Inter-chr q24.3 Transcription factor p13.3 Seq+ 76743 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF414-MYO1F ZNF414 chr19 8575735 - MYO1F chr19 8587713 - Exonic hg19 LUAD TCGA-55-8085-01A 3 3 In-Frame Intra-chr p13.2 Transcription factor p13.2 Seq+ 76744 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF415-SMG9 ZNF415 chr19 53619566 - SMG9 chr19 44244370 - Exonic hg19 LUAD TCGA-50-5055-01A 2 2 Out-of-frame Intra-chr q13.42 Transcription factor q13.31 76745 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF416-C19orf18 ZNF416 chr19 58089425 - C19orf18 chr19 58478000 - Exonic hg19 STAD TCGA-BR-A4QI-01A 4 68 Out-of-frame Intra-chr q13.43 Transcription factor q13.43 Seq+ 76746 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF416-DTD1 ZNF416 chr19 58089425 - DTD1 chr20 18724744 + Exonic hg19 KIRC TCGA-A3-3328-01A 16 6 In-Frame Inter-chr q13.43 Transcription factor p11.23 Seq+ 76747 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF420-DPF1 ZNF420 chr19 37582023 - DPF1 chr19 38704396 - Exonic hg19 ESCA TCGA-XP-A8T6-01A 13 40 In-Frame Intra-chr q13.12 Transcription factor q13.2 Transcription factor Seq+ 76748 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF420-SPINT2 ZNF420 chr19 37569472 - SPINT2 chr19 38774267 + Exonic hg19 SKCM TCGA-FW-A3R5-06A 3 2 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.2 Tumor suppressor gene Seq+ 76749 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF423-CCAR1 ZNF423 chr16 49764682 - CCAR1 chr10 70545893 + Exonic hg19 UCS TCGA-N8-A4PQ-01A 75 46 In-Frame Inter-chr q12.1 Transcription factor q21.3 Tumor suppressor gene Seq+ 76750 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF423-NCEH1 ZNF423 chr16 49823398 - NCEH1 chr3 172351882 - Exonic hg19 UCS TCGA-NF-A5CP-01A 2 9 Out-of-frame Inter-chr q12.1 Transcription factor q26.31 Seq+ 76751 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF423-NOD2 ZNF423 chr16 49764682 - NOD2 chr16 50733399 + Exonic hg19 BRCA TCGA-BH-A0B1-01A 4 1 In-Frame Intra-chr q12.1 Transcription factor q12.1 Seq+ 76752 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF429-C2CD3 ZNF429 chr19 21688576 - C2CD3 chr11 73809300 - Exonic hg19 SKCM TCGA-GN-A8LL-06A 2 3 Out-of-frame Inter-chr p12 Transcription factor q13.4 Seq+ 76753 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF429-LSM14A ZNF429 chr19 21688576 - LSM14A chr19 34717313 + Exonic hg19 UCEC TCGA-B5-A5OE-01A 10 9 In-Frame Intra-chr p12 Transcription factor Seq+ 76754 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF43-EFHB ZNF43 chr19 22018838 - EFHB chr3 19977826 - Exonic hg19 PRAD TCGA-EJ-5508-01A 6 5 5'UTR-5'UTR Inter-chr p12 Transcription factor p24.3 Seq+ 76755 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF430-CD19 ZNF430 chr19 21205687 - CD19 chr16 28944232 + Exonic hg19 BLCA TCGA-GV-A3JW-01A 2 3 Out-of-frame Inter-chr Transcription factor p11.2 76756 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF430-GABRB1 ZNF430 chr19 21216990 - GABRB1 chr4 47033931 + Exonic hg19 LUSC TCGA-34-5241-01A 2 4 Out-of-frame Inter-chr Transcription factor p12 Seq+ 76757 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF430-KCNIP4 ZNF430 chr19 21216990 - KCNIP4 chr4 20852290 - Exonic hg19 BLCA TCGA-GV-A3JZ-01A 4 1 In-Frame Inter-chr Transcription factor p15.2 Seq+ 76758 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF431-EPS15L1 ZNF431 chr19 21326446 - EPS15L1 chr19 16528448 - Exonic hg19 SARC TCGA-X6-A7WC-01A 2 5 In-Frame Intra-chr p12 Transcription factor p13.11 Seq+ 76759 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF431-SIGLEC6 ZNF431 chr19 21326446 - SIGLEC6 chr19 52034773 - Exonic hg19 SARC TCGA-3B-A9HX-01A 12 7 Out-of-frame Intra-chr p12 Transcription factor q13.41 Seq+ 76760 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF431-WIZ ZNF431 chr19 21326446 - WIZ chr19 15540900 - Exonic hg19 BRCA TCGA-AR-A24S-01A 22 13 Out-of-frame Intra-chr p12 Transcription factor p13.12 Transcription factor Seq+ 76761 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF433-CACNA1A ZNF433 chr19 12140955 - CACNA1A chr19 13341023 - Exonic hg19 PRAD TCGA-KK-A5A1-01A 2 2 Out-of-frame Intra-chr p13.2 Transcription factor p13.13 76762 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF433-RFX1 ZNF433 chr19 12146352 - RFX1 chr19 14091501 - Exonic hg19 LGG TCGA-TM-A7CF-01A 3 3 In-Frame Intra-chr p13.2 Transcription factor p13.12 Transcription factor Seq+ 76763 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF438-RFTN1 ZNF438 chr10 31273298 - RFTN1 chr3 16475544 - Exonic hg19 LIHC TCGA-HP-A5N0-01A 5 1 5'UTR-CDS Inter-chr p11.23 Transcription factor p24.3 Seq+ 76764 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF44-C12orf28 ZNF44 chr19 12405507 - C12orf28 chr12 70346579 + Exonic hg19 SARC TCGA-DX-A2J4-01A 13 39 Out-of-frame Inter-chr p13.2 Transcription factor 76765 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF45-KIAA0355 ZNF45 chr19 44428390 - KIAA0355 chr19 34790584 + Exonic hg19 SKCM TCGA-D3-A3CC-06A 4 3 5'UTR-5'UTR Intra-chr q13.31 Transcription factor 76766 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF451-NADSYN1 ZNF451 chr6 56999668 - NADSYN1 chr11 71174478 + Exonic hg19 BRCA TCGA-A8-A0A4-01A 7 4 Out-of-frame Inter-chr p12.1 Transcription factor q13.4 Seq+ 76767 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF460-C19orf18 ZNF460 chr19 57792204 - C19orf18 chr19 58470085 - Exonic hg19 COAD TCGA-QG-A5YX-01A 83 51 Out-of-frame Intra-chr q13.43 Transcription factor q13.43 Seq+ 76768 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF460-ELSPBP1 ZNF460 chr19 57796045 - ELSPBP1 chr19 48517428 + Exonic hg19 BRCA TCGA-A2-A0EV-01A 183 111 In-Frame Intra-chr q13.43 Transcription factor q13.33 Seq+ 76769 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF460-SYT4 ZNF460 chr19 57791492 - SYT4 chr18 40854359 - Exonic hg19 LGG TCGA-E1-A7YL-01A 7 6 5'UTR-CDS Inter-chr q13.43 Transcription factor q12.3 Seq+ 76770 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF461-AKT1 ZNF461 chr19 37147350 - AKT1 chr14 105246553 - Exonic hg19 PRAD TCGA-G9-6354-01A 3 1 In-Frame Inter-chr q13.12 Transcription factor q32.33 AGC:Akt Oncogene 76771 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF461-MATN2 ZNF461 chr19 37155600 - MATN2 chr8 98900303 + Exonic hg19 BRCA TCGA-AC-A5XU-01A 127 50 CDS-5'UTR Inter-chr q13.12 Transcription factor q22.1 Seq+ 76772 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF462-DNAJC1 ZNF462 chr9 109625636 - DNAJC1 chr10 22095028 - Exonic hg19 BRCA TCGA-A2-A04T-01A 12 29 5'UTR-CDS Inter-chr q31.2 Transcription factor p12.31 Seq+ 76773 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF462-ZBED2 ZNF462 chr9 109701388 - ZBED2 chr3 111313913 - Exonic hg19 SARC TCGA-3B-A9HV-01A 17 7 CDS-5'UTR Inter-chr q31.2 Transcription factor q13.13 Transcription factor Seq+ 76774 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF473-AP2A1 ZNF473 chr19 50534348 - AP2A1 chr19 50285014 + Exonic hg19 CESC TCGA-C5-A7X5-01A 10 4 Out-of-frame Intra-chr q13.33 Transcription factor q13.33 Seq+ 76775 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF480-CKM ZNF480 chr19 52819215 - CKM chr19 45815178 - Exonic hg19 LUSC TCGA-90-7767-01A 2 3 In-Frame Intra-chr q13.41 Transcription factor q13.32 76776 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF487P-FXYD4 ZNF487P chr10 43932383 - FXYD4 chr10 43868175 + Exonic hg19 BRCA TCGA-A7-A5ZV-01A 21 18 5'UTR-5'UTR Intra-chr q11.21 76777 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF490-FARSA ZNF490 chr19 12719972 - FARSA chr19 13041563 - Exonic hg19 LUSC TCGA-43-5670-01A 9 14 In-Frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 76778 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF492-NLRP5 ZNF492 chr19 22817276 - NLRP5 chr19 56549391 + Exonic hg19 BRCA TCGA-BH-A18K-01A 26 18 5'UTR-CDS Intra-chr p12 Transcription factor q13.43 Seq+ 76779 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF493-TMBIM4 ZNF493 chr19 21580069 - TMBIM4 chr12 66547228 - Exonic hg19 SARC TCGA-DX-A48N-01A 19 7 Out-of-frame Inter-chr p12 Transcription factor q14.3 Seq+ 76780 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF496-WIF1 ZNF496 chr1 247491985 - WIF1 chr12 65471634 - Exonic hg19 SARC TCGA-DX-AB2H-01A 9 3 Out-of-frame Inter-chr q44 Transcription factor q14.3 Tumor suppressor gene Seq+ 76781 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF498-SPATS1 ZNF498 chr7 99221803 - SPATS1 chr6 44336116 + Exonic hg19 LUSC TCGA-85-A4JB-01A 4 1 In-Frame Inter-chr p21.1 76782 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF498-TPST1 ZNF498 chr7 99221803 - TPST1 chr7 65817492 + Exonic hg19 BRCA TCGA-EW-A1PC-01B 2 2 Out-of-frame Intra-chr q11.21 76783 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF500-MMP25 ZNF500 chr16 4810493 - MMP25 chr16 3105832 + Exonic hg19 BLCA TCGA-DK-A2I1-01A 9 2 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 76784 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF503-NCRNA00245 ZNF503 chr10 77160863 - NCRNA00245 chr10 77167013 + Exonic hg19 LUSC TCGA-43-2578-01A 2 1 Out-of-frame Intra-chr q22.2 Transcription factor 76785 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF503-NCRNA00245 ZNF503 chr10 77160863 - NCRNA00245 chr10 77167013 + Exonic hg19 UVM TCGA-WC-A88A-01A 2 1 Out-of-frame Intra-chr q22.2 Transcription factor 76786 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF507-BCL2L13 ZNF507 chr19 32851524 - BCL2L13 chr22 18209443 + Exonic hg19 SKCM TCGA-FS-A1YY-06A 59 46 Out-of-frame Inter-chr q13.11 Transcription factor q11.21 Seq+ 76787 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF507-FXYD1 ZNF507 chr19 32851524 - FXYD1 chr19 35630980 + Exonic hg19 SARC TCGA-LI-A9QH-01A 20 20 CDS-5'UTR Intra-chr q13.11 Transcription factor q13.12 Seq+ 76788 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF507-LPHN1 ZNF507 chr19 32851524 - LPHN1 chr19 14294509 - Exonic hg19 STAD TCGA-BR-8289-01A 2 4 CDS-5'UTR Intra-chr q13.11 Transcription factor 76789 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF511-PPAPDC1A ZNF511 chr10 135125345 - PPAPDC1A chr10 122263330 + Exonic hg19 SARC TCGA-DX-A8BM-01A 3 3 In-Frame Intra-chr q26.3 Transcription factor 76790 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF512-ANXA4 ZNF512 chr2 27806009 - ANXA4 chr2 70008652 + Exonic hg19 UCEC TCGA-A5-A2K4-01A 28 18 CDS-5'UTR Intra-chr p23.3 Transcription factor p13.3 Seq+ 76791 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF512-KCNK3 ZNF512 chr2 27840438 - KCNK3 chr2 26950535 + Exonic hg19 OV TCGA-09-1673-01A 5 3 Out-of-frame Intra-chr p23.3 Transcription factor p23.3 Seq+ 76792 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF516-MBP ZNF516 chr18 74202637 - MBP chr18 74702016 - Exonic hg19 UCEC TCGA-AX-A3FX-01A 24 22 5'UTR-CDS Intra-chr q23 Transcription factor q23 Seq+ 76793 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF526-DEDD2 ZNF526 chr19 42728457 - DEDD2 chr19 42719404 - Exonic hg19 BLCA TCGA-K4-A3WS-01A 8 5 5'UTR-CDS Intra-chr q13.2 Transcription factor q13.2 76794 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF527-HNRNPUL1 ZNF527 chr19 37871274 - HNRNPUL1 chr19 41774128 + Exonic hg19 CESC TCGA-IR-A3LH-01A 6 4 In-Frame Intra-chr q13.12 Transcription factor q13.2 76795 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF529-FAM187B ZNF529 chr19 37063235 - FAM187B chr19 35716115 - Exonic hg19 HNSC TCGA-MT-A7BN-01A 2 1 In-Frame Intra-chr q13.12 Transcription factor q13.12 Seq+ 76796 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF532-DOK6 ZNF532 chr18 56532811 - DOK6 chr18 67508480 + Exonic hg19 CESC TCGA-C5-A7CK-01A 7 1 5'UTR-CDS Intra-chr q21.32 Transcription factor q22.2 Seq+ 76797 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF532-MALT1 ZNF532 chr18 56621031 - MALT1 chr18 56400629 + Exonic hg19 LUSC TCGA-43-5670-01A 11 15 Out-of-frame Intra-chr q21.32 Transcription factor q21.32 Oncogene Seq+ 76798 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF536-SPTBN1 ZNF536 chr19 31040421 - SPTBN1 chr2 54753509 + Exonic hg19 UCS TCGA-NA-A4QV-01A 5 1 CDS-5'UTR Inter-chr q12 Transcription factor p16.2 Tumor suppressor gene 76799 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF541-C19orf68 ZNF541 chr19 48047383 - C19orf68 chr19 48697910 + Exonic hg19 ESCA TCGA-L5-A891-01A 3 10 Out-of-frame Intra-chr q13.33 Transcription factor q13.33 Seq+ 76800 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF544-AP2A1 ZNF544 chr19 58758160 - AP2A1 chr19 50285014 + Exonic hg19 GBM TCGA-32-1970-01A 13 54 In-Frame Intra-chr q13.43 Transcription factor q13.33 Seq+ 76801 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF544-CCDC61 ZNF544 chr19 58758160 - CCDC61 chr19 46506266 + Exonic hg19 BLCA TCGA-HQ-A2OE-01A 17 15 In-Frame Intra-chr q13.43 Transcription factor q13.32 Seq+ 76802 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF544-GRIN2D ZNF544 chr19 58741828 - GRIN2D chr19 48907991 + Exonic hg19 SKCM TCGA-D3-A2JE-06A 17 10 5'UTR-CDS Intra-chr q13.43 Transcription factor q13.33 Seq+ 76803 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF544-SENP6 ZNF544 chr19 58741828 - SENP6 chr6 76385576 + Exonic hg19 BRCA TCGA-A8-A094-01A 15 7 5'UTR-CDS Inter-chr q13.43 Transcription factor q14.1 Seq+ 76804 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF546-HNRNPD ZNF546 chr19 40514472 - HNRNPD chr4 83280792 - Exonic hg19 UCS TCGA-N8-A4PP-01A 29 13 Out-of-frame Inter-chr Transcription factor q21.22 Seq+ 76805 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF549-CTU1 ZNF549 chr19 58046638 - CTU1 chr19 51607847 - Exonic hg19 BRCA TCGA-B6-A0I2-01A 2 5 CDS-5'UTR Intra-chr q13.43 Transcription factor q13.41 Seq+ 76806 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF551-AATF ZNF551 chr19 58196753 - AATF chr17 35413901 + Exonic hg19 SARC TCGA-DX-A8BM-01A 4 2 Out-of-frame Inter-chr q13.43 Transcription factor 76807 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF552-UBL3 ZNF552 chr19 58324662 - UBL3 chr13 30351400 - Exonic hg19 BRCA TCGA-BH-A1EY-01A 6 8 Out-of-frame Inter-chr q13.43 Transcription factor q12.3 Seq+ 76808 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF557-C19orf75 ZNF557 chr19 7076518 - C19orf75 chr19 51771825 + Exonic hg19 LUSC TCGA-60-2706-01A 3 6 Out-of-frame Intra-chr p13.2 Transcription factor 76809 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF559-FAM129C ZNF559 chr19 9435456 - FAM129C chr19 17638078 + Exonic hg19 UCEC TCGA-AJ-A3TW-01A 15 8 Out-of-frame Intra-chr p13.2 Transcription factor p13.11 Seq+ 76810 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF562-DTX3 ZNF562 chr19 9785691 - DTX3 chr12 57999973 + Exonic hg19 SARC TCGA-DX-A2J4-01A 16 23 5'UTR-5'UTR Inter-chr p13.2 Transcription factor q13.3 Seq+ 76811 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF562-RFX2 ZNF562 chr19 9770055 - RFX2 chr19 6047515 - Exonic hg19 LUSC TCGA-94-A4VJ-01A 4 3 CDS-5'UTR Intra-chr p13.2 Transcription factor p13.3 Transcription factor Seq+ 76812 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF562-SARNP ZNF562 chr19 9785691 - SARNP chr12 56146624 - Exonic hg19 SARC TCGA-DX-A6BE-01A 10 8 5'UTR-3'UTR Inter-chr p13.2 Transcription factor q13.2 Seq+ 76813 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF567-HCST ZNF567 chr19 37185778 - HCST chr19 36394253 + Exonic hg19 UCS TCGA-N6-A4VC-01A 5 3 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.12 Seq+ 76814 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF569-A1BG ZNF569 chr19 37935809 - A1BG chr19 58869951 - Exonic hg19 SARC TCGA-3B-A9HX-01A 12 3 CDS-5'UTR Intra-chr q13.12 Transcription factor q13.43 76815 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF569-IZUMO2 ZNF569 chr19 37957986 - IZUMO2 chr19 50662837 - Exonic hg19 BRCA TCGA-AR-A0TT-01A 2 2 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.33 76816 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF57-NANOS3 ZNF57 chr19 2901046 - NANOS3 chr19 13991256 + Exonic hg19 SKCM TCGA-DA-A1I0-06A 19 24 Out-of-frame Intra-chr p13.3 Transcription factor p13.12 Seq+ 76817 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF571-CATSPERG ZNF571 chr19 38077569 - CATSPERG chr19 38848918 + Exonic hg19 LUSC TCGA-22-1005-01A 2 1 Out-of-frame Intra-chr q13.12 Transcription factor q13.2 76818 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF577-GRIK5 ZNF577 chr19 52380535 - GRIK5 chr19 42526506 - Exonic hg19 LGG TCGA-CS-4943-01A 8 6 Out-of-frame Intra-chr q13.41 Transcription factor q13.2 Seq+ 76819 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF583-CCDC106 ZNF583 chr19 56925809 - CCDC106 chr19 56162649 + Exonic hg19 LGG TCGA-E1-A7YL-01A 183 278 In-Frame Intra-chr q13.43 Transcription factor q13.42 Seq+ 76820 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF585A-CCDC3 ZNF585A chr19 37646767 - CCDC3 chr10 13040512 - Exonic hg19 PRAD TCGA-V1-A9O5-06A 24 34 Out-of-frame Inter-chr q13.12 Transcription factor p13 Seq+ 76821 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF585A-FXYD1 ZNF585A chr19 37646767 - FXYD1 chr19 35630980 + Exonic hg19 PRAD TCGA-V1-A9O5-06A 5 2 CDS-5'UTR Intra-chr q13.12 Transcription factor q13.12 76822 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF585A-GRAMD1A ZNF585A chr19 37656497 - GRAMD1A chr19 35504160 + Exonic hg19 BRCA TCGA-C8-A12P-01A 8 8 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.11 Seq+ 76823 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF585B-C2CD2L ZNF585B chr19 37697942 - C2CD2L chr11 118983038 + Exonic hg19 LAML TCGA-AB-2857-03A 3 3 Out-of-frame Inter-chr q13.12 Transcription factor q23.3 76824 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF585B-CACNA1G ZNF585B chr19 37697942 - CACNA1G chr17 48652904 + Exonic hg19 LUAD TCGA-69-A59K-01A 20 11 In-Frame Inter-chr q13.12 Transcription factor q21.33 76825 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF585B-MYRIP ZNF585B chr19 37697942 - MYRIP chr3 40223711 + Exonic hg19 STAD TCGA-BR-7901-01A 5 13 In-Frame Inter-chr q13.12 Transcription factor p22.1 Seq+ 76826 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF586-AATF ZNF586 chr19 58281246 - AATF chr17 35413901 + Exonic hg19 SARC TCGA-DX-A8BM-01A 192 77 Out-of-frame Inter-chr q13.43 Transcription factor Seq+ 76827 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF586-SRC ZNF586 chr19 58281246 - SRC chr20 36028518 + Exonic hg19 BRCA TCGA-AO-A03V-01A 17 3 Out-of-frame Inter-chr q13.43 Transcription factor q11.23 TK:Src Oncogene Seq+ 76828 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF587-APOM ZNF587 chr19 58331313 - APOM chr6 31624249 + Exonic hg19 SKCM TCGA-FS-A1ZK-06A 2 1 5'UTR-5'UTR Inter-chr q13.43 Transcription factor 76829 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF587-AURKC ZNF587 chr19 58361439 - AURKC chr19 57743110 + Exonic hg19 UCEC TCGA-PG-A914-01A 14 13 Out-of-frame Intra-chr q13.43 Transcription factor q13.43 Oncogene Seq+ 76830 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF587-SRC ZNF587 chr19 58331313 - SRC chr20 36028518 + Exonic hg19 BRCA TCGA-AO-A03V-01A 68 22 5'UTR-CDS Inter-chr q13.43 Transcription factor q11.23 TK:Src Oncogene 76831 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF587-TMEM150B ZNF587 chr19 58331917 - TMEM150B chr19 55834111 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 17 10 5'UTR-5'UTR Intra-chr q13.43 Transcription factor q13.42 76832 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF589-ALS2CL ZNF589 chr3 48298512 - ALS2CL chr3 46730955 - Exonic hg19 PRAD TCGA-J9-A52E-01A 4 1 CDS-5'UTR Intra-chr p21.31 Transcription factor p21.31 Seq+ 76833 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF589-CAMP ZNF589 chr3 48299451 - CAMP chr3 48265844 + Exonic hg19 BRCA TCGA-AO-A1KR-01A 73 19 Out-of-frame Intra-chr p21.31 Transcription factor p21.31 Seq+ 76834 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF589-LRRFIP2 ZNF589 chr3 48302429 - LRRFIP2 chr3 37190529 - Exonic hg19 MESO TCGA-MQ-A4LM-01A 4 4 CDS-5'UTR Intra-chr p21.31 Transcription factor p22.2 Seq+ 76835 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF594-C17orf87 ZNF594 chr17 5095043 - C17orf87 chr17 5114250 - Exonic hg19 BRCA TCGA-AR-A1AO-01A 2 2 Out-of-frame Intra-chr p13.2 Transcription factor 76836 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF595-RAB28 ZNF595 chr4 53385 - RAB28 chr4 13383218 - Exonic hg19 SARC TCGA-X6-A8C2-01A 4 7 Out-of-frame Intra-chr p16.3 Transcription factor p15.33 Seq+ 76837 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF598-C16orf62 ZNF598 chr16 2059525 - C16orf62 chr16 19702675 + Exonic hg19 BLCA TCGA-HQ-A2OE-01A 112 62 Out-of-frame Intra-chr p13.3 Transcription factor p12.3 Seq+ 76838 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF599-SCN1B ZNF599 chr19 35258221 - SCN1B chr19 35523432 + Exonic hg19 LUSC TCGA-43-7657-01A 2 3 In-Frame Intra-chr q13.11 Transcription factor q13.11 Seq+ 76839 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF600-NFX1 ZNF600 chr19 53282079 - NFX1 chr9 33301261 + Exonic hg19 BRCA TCGA-D8-A1XD-01A 4 12 5'UTR-CDS Inter-chr q13.41 Transcription factor p13.3 Transcription factor Seq+ 76840 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF606-RDH13 ZNF606 chr19 58499575 - RDH13 chr19 55575780 - Exonic hg19 BLCA TCGA-CU-A0YN-01A 7 3 CDS-5'UTR Intra-chr q13.43 Transcription factor Seq+ 76841 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF607-CAPN12 ZNF607 chr19 38198815 - CAPN12 chr19 39233168 - Exonic hg19 BRCA TCGA-BH-A0B9-01A 24 2 In-Frame Intra-chr q13.12 Transcription factor q13.2 Seq+ 76842 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF609-NPTXR ZNF609 chr15 64915251 - NPTXR chr22 39224517 - Exonic hg19 UCS TCGA-N6-A4VG-01A 7 6 Out-of-frame Inter-chr q22.31 Transcription factor q13.1 76843 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF609-PDCD7 ZNF609 chr15 64792365 - PDCD7 chr15 65421508 - Exonic hg19 HNSC TCGA-CQ-6225-01A 3 1 In-Frame Intra-chr q22.31 Transcription factor q22.31 76844 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF610-RALA ZNF610 chr19 52839759 - RALA chr7 39745722 + Exonic hg19 GBM TCGA-32-1970-01A 8 35 5'UTR-CDS Inter-chr q13.41 Transcription factor p14.1 Seq+ 76845 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF613-CYP2A6 ZNF613 chr19 52433149 - CYP2A6 chr19 41354668 - Exonic hg19 BRCA TCGA-AR-A0U3-01A 59 9 5'UTR-CDS Intra-chr q13.41 Transcription factor q13.2 Seq+ 76846 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF613-SIGLEC7 ZNF613 chr19 52433149 - SIGLEC7 chr19 51656320 + Exonic hg19 BLCA TCGA-FJ-A3ZF-01A 26 12 5'UTR-CDS Intra-chr q13.41 Transcription factor q13.41 Seq+ 76847 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF616-TRAPPC8 ZNF616 chr19 52633754 - TRAPPC8 chr18 29511486 - Exonic hg19 ACC TCGA-OR-A5LL-01A 3 1 Out-of-frame Inter-chr q13.41 Transcription factor q12.1 Seq+ 76848 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF618-KIAA0195 ZNF618 chr9 116638693 - KIAA0195 chr17 73467881 + Exonic hg19 UCEC TCGA-AJ-A6NU-01A 19 15 CDS-5'UTR Inter-chr q32 Transcription factor Seq+ 76849 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF618-MTAP ZNF618 chr9 116638693 - MTAP chr9 21815432 + Exonic hg19 PRAD TCGA-EJ-A8FO-01A 4 2 In-Frame Intra-chr q32 Transcription factor p21.3 Tumor suppressor gene Seq+ 76850 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF618-PARP4 ZNF618 chr9 116638693 - PARP4 chr13 25027792 - Exonic hg19 PRAD TCGA-HC-7744-01A 10 12 Out-of-frame Inter-chr q32 Transcription factor q12.12 Seq+ 76851 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF618-SLC31A1 ZNF618 chr9 116638693 - SLC31A1 chr9 116018394 + Exonic hg19 LGG TCGA-E1-A7YE-01A 9 10 CDS-5'UTR Intra-chr q32 Transcription factor q32 Seq+ 76852 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF618-SUSD1 ZNF618 chr9 116731440 - SUSD1 chr9 114804240 - Exonic hg19 LUAD TCGA-05-4402-01A 4 2 Out-of-frame Intra-chr q32 Transcription factor q32 Seq+ 76853 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF627-METTL4 ZNF627 chr19 11708445 - METTL4 chr18 2567653 - Exonic hg19 SARC TCGA-HS-A5N9-01A 5 1 CDS-5'UTR Inter-chr p13.2 Transcription factor p11.32 76854 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF627-MRI1 ZNF627 chr19 11708445 - MRI1 chr19 13879375 + Exonic hg19 KIRP TCGA-BQ-5890-01A 9 5 Out-of-frame Intra-chr p13.2 Transcription factor p13.13 Seq+ 76855 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF638-ANTXR1 ZNF638 chr2 71645769 - ANTXR1 chr2 69472357 + Exonic hg19 STAD TCGA-VQ-A92D-01A 2 11 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 76856 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF638-C2orf74 ZNF638 chr2 71645769 - C2orf74 chr2 61389977 + Exonic hg19 LUAD TCGA-69-7979-01A 23 28 In-Frame Intra-chr p13.3 p15 Seq+ 76857 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF638-C2orf78 ZNF638 chr2 71558995 - C2orf78 chr2 74040604 + Exonic hg19 BLCA TCGA-FD-A3SM-01A 12 5 5'UTR-CDS Intra-chr p13.3 p13.1 Seq+ 76858 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF638-EXOC6B ZNF638 chr2 71503884 - EXOC6B chr2 72411316 - Exonic hg19 LGG TCGA-HT-7902-01A 2 1 5'UTR-CDS Intra-chr p13.3 p13.2 Seq+ 76859 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF638-MPHOSPH10 ZNF638 chr2 71503884 - MPHOSPH10 chr2 71360028 + Exonic hg19 CESC TCGA-EA-A50E-01A 2 3 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 76860 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF638-PHACTR1 ZNF638 chr2 71503884 - PHACTR1 chr6 13160436 + Exonic hg19 LUAD TCGA-44-7670-01A 4 4 5'UTR-CDS Inter-chr p13.3 Seq+ 76861 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF638-TRIM55 ZNF638 chr2 71635377 - TRIM55 chr8 67086706 + Exonic hg19 UCS TCGA-N8-A4PO-01A 58 28 In-Frame Inter-chr p13.3 q13.1 Seq+ 76862 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF641-C12orf28 ZNF641 chr12 48741035 - C12orf28 chr12 70249060 + Exonic hg19 SARC TCGA-3B-A9HO-01A 2 2 Out-of-frame Intra-chr q13.11 Transcription factor 76863 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF644-PTGER3 ZNF644 chr1 91487547 - PTGER3 chr1 71318542 - Exonic hg19 LUAD TCGA-05-4402-01A 9 5 5'UTR-CDS Intra-chr p22.2 Transcription factor p31.1 Seq+ 76864 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF646-VSTM1 ZNF646 chr16 31085952 - VSTM1 chr19 54545623 - Exonic hg19 UCEC TCGA-AJ-A3NH-01A 27 11 5'UTR-CDS Inter-chr p11.2 Transcription factor Seq+ 76865 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF653-CNN1 ZNF653 chr19 11616303 - CNN1 chr19 11651891 + Exonic hg19 LUSC TCGA-94-7943-01A 5 1 Out-of-frame Intra-chr p13.2 Transcription factor p13.2 Tumor suppressor gene Seq+ 76866 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF653-NFIC ZNF653 chr19 11616303 - NFIC chr19 3425104 + Exonic hg19 LUSC TCGA-39-5019-01A 6 6 Out-of-frame Intra-chr p13.2 Transcription factor p13.3 Transcription factor Seq+ 76867 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF653-PDE4A ZNF653 chr19 11609111 - PDE4A chr19 10527560 + Exonic hg19 LUSC TCGA-37-A5EN-01A 2 1 CDS-5'UTR Intra-chr p13.2 Transcription factor p13.2 76868 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF664-SH3BP4 ZNF664 chr12 124458567 - SH3BP4 chr2 235903947 + Exonic hg19 SARC TCGA-DX-AATS-01A 2 4 5'UTR-5'UTR Inter-chr q24.31 Transcription factor q37.2 Seq+ 76869 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF665-RANBP3L ZNF665 chr19 53678698 - RANBP3L chr5 36271413 - Exonic hg19 SARC TCGA-FX-A2QS-01A 23 17 In-Frame Inter-chr q13.42 Transcription factor p13.2 Seq+ 76870 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF667-ZNF837 ZNF667 chr19 56973707 - ZNF837 chr19 58881295 - Exonic hg19 SKCM TCGA-ER-A19M-06A 41 30 CDS-5'UTR Intra-chr q13.43 Transcription factor q13.43 Transcription factor Seq+ 76871 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF671-PRRG2 ZNF671 chr19 58238759 - PRRG2 chr19 50091754 + Exonic hg19 BRCA TCGA-A1-A0SQ-01A 2 3 Out-of-frame Intra-chr q13.43 Transcription factor q13.33 Seq+ 76872 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF675-BRCA1 ZNF675 chr19 23869833 - BRCA1 chr17 41276132 - Exonic hg19 LUAD TCGA-69-A59K-01A 7 7 CDS-5'UTR Inter-chr p12 Transcription factor q21.31 Oncogene Tumor suppressor gene Seq+ 76873 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF675-IGSF23 ZNF675 chr19 23869833 - IGSF23 chr19 45127000 + Exonic hg19 BRCA TCGA-A8-A08I-01A 82 26 Out-of-frame Intra-chr p12 Transcription factor q13.31 Seq+ 76874 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF675-SLC27A1 ZNF675 chr19 23869833 - SLC27A1 chr19 17581349 + Exonic hg19 UCS TCGA-N8-A4PL-01A 6 4 CDS-5'UTR Intra-chr p12 Transcription factor p13.11 Seq+ 76875 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF676-KANK3 ZNF676 chr19 22375818 - KANK3 chr19 8389980 - Exonic hg19 LGG TCGA-P5-A77X-01A 34 71 In-Frame Intra-chr Transcription factor p13.2 Seq+ 76876 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF677-WDR88 ZNF677 chr19 53758087 - WDR88 chr19 33666302 + Exonic hg19 CESC TCGA-C5-A907-01A 9 22 5'UTR-CDS Intra-chr q13.42 Transcription factor q13.11 Seq+ 76877 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF679-VOPP1 ZNF679 chr7 63709534 - VOPP1 chr7 55588823 - Exonic hg19 LUAD TCGA-05-4402-01A 3 34 In-Frame Intra-chr q11.21 Transcription factor p11.2 Seq+ 76878 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF681-IMMP2L ZNF681 chr19 23941549 - IMMP2L chr7 110603621 - Exonic hg19 STAD TCGA-BR-8289-01A 3 13 Out-of-frame Inter-chr p12 Transcription factor q31.1 Seq+ 76879 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF684-EIF2B3 ZNF684 chr1 40998853 - EIF2B3 chr1 45316675 - Exonic hg19 TGCT TCGA-XY-A8S2-01A 4 17 Out-of-frame Intra-chr p34.2 Transcription factor p34.1 Seq+ 76880 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF69-AP3D1 ZNF69 chr19 11998801 - AP3D1 chr19 2121878 - Exonic hg19 LGG TCGA-DU-8167-01A 5 1 Out-of-frame Intra-chr p13.2 Transcription factor p13.3 76881 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF69-WDR16 ZNF69 chr19 11998801 - WDR16 chr17 9531989 + Exonic hg19 PRAD TCGA-2A-A8VL-01A 4 4 Out-of-frame Inter-chr p13.2 Transcription factor Seq+ 76882 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF695-SMYD3 ZNF695 chr1 247171208 - SMYD3 chr1 246093239 - Exonic hg19 STAD TCGA-BR-4369-01A 4 7 In-Frame Intra-chr q44 Transcription factor q44 Transcription factor 76883 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF699-ELAVL1 ZNF699 chr19 9413054 - ELAVL1 chr19 8056715 - Exonic hg19 BRCA TCGA-D8-A1XZ-01A 10 4 CDS-5'UTR Intra-chr p13.2 Transcription factor p13.2 Seq+ 76884 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF699-NR1I2 ZNF699 chr19 9407972 - NR1I2 chr3 119526076 + Exonic hg19 SARC TCGA-SI-A71Q-01A 2 2 In-Frame Inter-chr p13.2 Transcription factor q13.33 Tumor suppressor gene Transcription factor 76885 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF699-ZSWIM4 ZNF699 chr19 9413054 - ZSWIM4 chr19 13923811 + Exonic hg19 BRCA TCGA-D8-A1XZ-01A 2 1 In-Frame Intra-chr p13.2 Transcription factor p13.13 76886 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF7-KALRN ZNF7 chr8 146054989 - KALRN chr3 124113982 + Exonic hg19 LIHC TCGA-2Y-A9GZ-01A 13 15 Out-of-frame Inter-chr q24.3 Transcription factor q21.1 Seq+ 76887 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF701-PSMA7 ZNF701 chr19 53073583 - PSMA7 chr20 60716000 - Exonic hg19 BRCA TCGA-UL-AAZ6-01A 6 94 5'UTR-CDS Inter-chr q13.41 Transcription factor q13.33 Seq+ 76888 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF703-DDX27 ZNF703 chr8 37557537 - DDX27 chr20 47849303 + Exonic hg19 COAD TCGA-CM-5344-01A 2 2 Out-of-frame Inter-chr p11.23 Transcription factor q13.13 76889 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF704-DLGAP1 ZNF704 chr8 81733609 - DLGAP1 chr18 3582246 - Exonic hg19 BLCA TCGA-E7-A5KE-01A 10 1 Out-of-frame Inter-chr q21.13 Transcription factor p11.31 Seq+ 76890 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF704-IMPA1 ZNF704 chr8 81599461 - IMPA1 chr8 82583282 - Exonic hg19 SKCM TCGA-ER-A19T-01A 20 5 Out-of-frame Intra-chr q21.13 Transcription factor q21.13 Seq+ 76891 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF704-PAG1 ZNF704 chr8 81599461 - PAG1 chr8 81905542 - Exonic hg19 LUSC TCGA-60-2706-01A 6 1 CDS-5'UTR Intra-chr q21.13 Transcription factor q21.13 76892 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF709-CD177 ZNF709 chr19 12624558 - CD177 chr19 43858359 + Exonic hg19 OV TCGA-24-1558-01A 11 1 5'UTR-CDS Intra-chr p13.2 Transcription factor q13.31 Seq+ 76893 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF709-ELL ZNF709 chr19 12595469 - ELL chr19 18557624 - Exonic hg19 UCEC TCGA-PG-A915-01A 21 23 Out-of-frame Intra-chr p13.2 Transcription factor p13.11 Seq+ 76894 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF709-MAN2B1 ZNF709 chr19 12595469 - MAN2B1 chr19 12758412 - Exonic hg19 CESC TCGA-IR-A3LI-01A 183 103 In-Frame Intra-chr p13.2 Transcription factor p13.13 Seq+ 76895 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF71-C12orf28 ZNF71 chr19 57112959 - C12orf28 chr12 70249060 + Exonic hg19 SARC TCGA-DX-A3LS-01A 8 3 Out-of-frame Inter-chr q13.43 Transcription factor 76896 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF71-HSPB8 ZNF71 chr19 57112959 - HSPB8 chr12 119624830 + Exonic hg19 SARC TCGA-DX-A3LS-01A 19 19 5'UTR-CDS Inter-chr q13.43 Transcription factor q24.23 Seq+ 76897 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF714-C19orf75 ZNF714 chr19 21266875 - C19orf75 chr19 51771825 + Exonic hg19 LUSC TCGA-60-2706-01A 5 5 5'UTR-CDS Intra-chr p12 Transcription factor Seq+ 76898 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF716-C7orf72 ZNF716 chr7 57510033 - C7orf72 chr7 50191046 + Exonic hg19 PRAD TCGA-J9-A8CP-01A 95 139 Out-of-frame Intra-chr p11.2 Transcription factor p12.2 Seq+ 76899 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF717-C10orf57 ZNF717 chr3 75832457 - C10orf57 chr10 81841597 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 35 28 In-Frame Inter-chr p12.3 Transcription factor 76900 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF717-FOXP1 ZNF717 chr3 75832457 - FOXP1 chr3 71542706 - Exonic hg19 COAD TCGA-F4-6459-01A 3 2 CDS-5'UTR Intra-chr p12.3 Transcription factor p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 76901 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF721-RFPL3-AS1 ZNF721 chr4 429559 - RFPL3-AS1 chr22 32764554 - Exonic hg19 LUAD TCGA-69-7979-01A 3 1 Out-of-frame Inter-chr p16.3 Transcription factor 76902 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF730-CEP89 ZNF730 chr19 23299978 - CEP89 chr19 33392318 - Exonic hg19 SARC TCGA-QC-A6FX-01A 11 9 Out-of-frame Intra-chr p12 Transcription factor q13.11 Seq+ 76903 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF732-DAB1 ZNF732 chr4 289227 - DAB1 chr1 57611102 - Exonic hg19 BRCA TCGA-A2-A3Y0-01A 33 9 In-Frame Inter-chr p16.3 Transcription factor p32.1 Seq+ 76904 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF736-AC011294.3 ZNF736 chr7 63774531 - AC011294.3 chr7 46732567 - Exonic hg19 READ TCGA-EI-6884-01A 9 4 Out-of-frame Intra-chr q11.21 Transcription factor 76905 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF750-B3GNTL1 ZNF750 chr17 80797803 - B3GNTL1 chr17 80923622 - Exonic hg19 BRCA TCGA-E2-A1LE-01A 28 22 5'UTR-CDS Intra-chr q25.3 Transcription factor Seq+ 76906 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF75D-UBR2 ZNF75D chrX 134475693 - UBR2 chr6 42627394 + Exonic hg19 LUSC TCGA-O2-A5IB-01A 21 14 5'UTR-CDS Inter-chr q26.3 Transcription factor p21.1 Seq+ 76907 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF76-ANKS1A ZNF76 chr6 35263760 - ANKS1A chr6 34977682 + Exonic hg19 HNSC TCGA-BA-6871-01A 4 4 Out-of-frame Intra-chr p21.31 Transcription factor p21.31 Seq+ 76908 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF763-CXorf58 ZNF763 chr19 12076026 - CXorf58 chrX 23928400 + Exonic hg19 LUAD TCGA-73-A9RS-01A 4 1 CDS-5'UTR Inter-chr p13.2 Transcription factor p22.11 Seq+ 76909 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF763-RAD23A ZNF763 chr19 12036088 - RAD23A chr19 13063503 + Exonic hg19 SARC TCGA-HS-A5N9-01A 412 90 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.13 Seq+ 76910 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF763-TEX101 ZNF763 chr19 12036088 - TEX101 chr19 43920033 + Exonic hg19 CESC TCGA-VS-A8Q9-01A 28 1 5'UTR-5'UTR Intra-chr p13.2 Transcription factor q13.31 76911 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF77-LPCAT2 ZNF77 chr19 2944836 - LPCAT2 chr16 55559420 + Exonic hg19 BRCA TCGA-D8-A1XL-01A 9 6 In-Frame Inter-chr p13.3 Transcription factor q12.2 Seq+ 76912 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF774-TTLL13 ZNF774 chr15 90902189 - TTLL13 chr15 90796481 + Exonic hg19 COAD TCGA-QG-A5YV-01A 14 3 In-Frame Intra-chr q26.1 Transcription factor 76913 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF780A-NADSYN1 ZNF780A chr19 40596073 - NADSYN1 chr11 71201891 + Exonic hg19 CHOL TCGA-W5-AA2X-01A 24 18 5'UTR-CDS Inter-chr Transcription factor q13.4 Seq+ 76914 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF780A-SAMD4B ZNF780A chr19 40587726 - SAMD4B chr19 39860295 + Exonic hg19 MESO TCGA-MQ-A4LP-01A 4 3 In-Frame Intra-chr Transcription factor q13.2 Seq+ 76915 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF786-FAM116B ZNF786 chr7 148771478 - FAM116B chr22 50757432 - Exonic hg19 SKCM TCGA-EB-A551-01A 19 19 Out-of-frame Inter-chr q36.1 Transcription factor Seq+ 76916 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF786-LANCL2 ZNF786 chr7 148787715 - LANCL2 chr7 55466116 + Exonic hg19 LUAD TCGA-97-A4M1-01A 3 3 Out-of-frame Intra-chr q36.1 Transcription factor p11.2 Seq+ 76917 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF787-RP11-677C1.2 ZNF787 chr19 56614508 - RP11-677C1.2 chr12 29614667 + Exonic hg19 SARC TCGA-3B-A9I1-01A 46 32 Out-of-frame Inter-chr q13.43 Transcription factor 76918 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF79-FAM129B ZNF79 chr9 130198282 - FAM129B chr9 130269710 - Exonic hg19 BRCA TCGA-AO-A12G-01A 138 109 In-Frame Intra-chr q33.3 Transcription factor q34.11 Seq+ 76919 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF79-SLC2A8 ZNF79 chr9 130198282 - SLC2A8 chr9 130162186 + Exonic hg19 SKCM TCGA-ER-A19L-06A 5 5 Out-of-frame Intra-chr q33.3 Transcription factor q33.3 Seq+ 76920 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF790-ATP4A ZNF790 chr19 37340904 - ATP4A chr19 36044084 - Exonic hg19 UCEC TCGA-A5-A1OH-01A 77 56 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.12 Seq+ 76921 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF790-RHPN2 ZNF790 chr19 37340904 - RHPN2 chr19 33535270 - Exonic hg19 LGG TCGA-E1-5304-01A 9 15 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.11 Seq+ 76922 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF791-ETHE1 ZNF791 chr19 12721896 - ETHE1 chr19 44015718 - Exonic hg19 OV TCGA-24-1558-01A 76 40 In-Frame Intra-chr p13.13 Transcription factor q13.31 Seq+ 76923 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF791-HOOK2 ZNF791 chr19 12721896 - HOOK2 chr19 12874592 - Exonic hg19 KIRP TCGA-HE-7130-01A 72 25 In-Frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 76924 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF791-MLL5 ZNF791 chr19 12721896 - MLL5 chr7 104714066 + Exonic hg19 SKCM TCGA-ER-A1A1-06A 4 1 Out-of-frame Inter-chr p13.13 Transcription factor 76925 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF799-C19orf75 ZNF799 chr19 12511882 - C19orf75 chr19 51767137 + Exonic hg19 SARC TCGA-3B-A9HX-01A 2 1 CDS-5'UTR Intra-chr p13.2 Transcription factor 76926 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF799-EPS15L1 ZNF799 chr19 12511882 - EPS15L1 chr19 16545301 - Exonic hg19 STAD TCGA-CG-4449-01A 13 18 In-Frame Intra-chr p13.2 Transcription factor p13.11 Seq+ 76927 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF8-SSBP4 ZNF8 chr19 58790513 - SSBP4 chr19 18538161 + Exonic hg19 LUSC TCGA-22-5478-01A 41 62 Out-of-frame Intra-chr q13.43 Transcription factor p13.11 Seq+ 76928 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF804A-IRF2 ZNF804A chr2 185463797 - IRF2 chr4 185350224 - Exonic hg19 LGG TCGA-HT-7477-01B 60 45 CDS-5'UTR Inter-chr q32.1 Transcription factor q35.1 Transcription factor Seq+ 76929 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF805-ETFB ZNF805 chr19 57752289 - ETFB chr19 51857562 - Exonic hg19 OV TCGA-24-1551-01A 9 23 In-Frame Intra-chr q13.43 Transcription factor q13.41 Seq+ 76930 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF808-C19orf21 ZNF808 chr19 53030964 - C19orf21 chr19 756890 + Exonic hg19 BLCA TCGA-GU-A42Q-01A 10 8 5'UTR-5'UTR Intra-chr q13.41 Transcription factor Seq+ 76931 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF814-IRF3 ZNF814 chr19 58388284 - IRF3 chr19 50163090 - Exonic hg19 BRCA TCGA-A1-A0SQ-01A 10 9 In-Frame Intra-chr q13.43 Transcription factor q13.33 Tumor suppressor gene Transcription factor Seq+ 76932 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF814-ZSCAN18 ZNF814 chr19 58388284 - ZSCAN18 chr19 58601753 - Exonic hg19 LUSC TCGA-94-8491-01A 2 1 In-Frame Intra-chr q13.43 Transcription factor q13.43 Transcription factor 76933 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF821-CHD9 ZNF821 chr16 71913810 - CHD9 chr16 53269097 + Exonic hg19 PRAD TCGA-HC-8262-01A 4 2 Out-of-frame Intra-chr q22.2 Transcription factor q12.2 Seq+ 76934 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF823-VAV1 ZNF823 chr19 11849632 - VAV1 chr19 6820713 + Exonic hg19 BRCA TCGA-B6-A0IQ-01A 4 2 In-Frame Intra-chr p13.2 Transcription factor p13.3 Seq+ 76935 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF827-EEF2 ZNF827 chr4 146682281 - EEF2 chr19 3985461 - Exonic hg19 PRAD TCGA-EJ-5511-01A 2 1 3'UTR-5'UTR Inter-chr q31.22 Transcription factor p13.3 76936 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF828-COL4A2 ZNF828 chr13 115086707 - COL4A2 chr13 111160282 + Exonic hg19 STAD TCGA-VQ-A922-01A 4 65 Out-of-frame Intra-chr q34 76937 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF828-PTPRK ZNF828 chr13 115086707 - PTPRK chr6 128411137 - Exonic hg19 SARC TCGA-DX-A23R-01A 2 1 Out-of-frame Inter-chr Tumor suppressor gene 76938 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF83-AC011497.1 ZNF83 chr19 53158814 - AC011497.1 chr19 42989248 + Exonic hg19 CESC TCGA-IR-A3LH-01A 2 1 Out-of-frame Intra-chr q13.41 Transcription factor q13.2 76939 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF83-PCDH15 ZNF83 chr19 53138319 - PCDH15 chr10 56424050 - Exonic hg19 BRCA TCGA-A2-A0EV-01A 22 14 5'UTR-5'UTR Inter-chr q13.41 Transcription factor q21.1 Seq+ 76940 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF83-TARM1 ZNF83 chr19 53158814 - TARM1 chr19 54573414 - Exonic hg19 OV TCGA-59-2348-01A 3 54 5'UTR-CDS Intra-chr q13.41 Transcription factor Seq+ 76941 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF836-IGSF23 ZNF836 chr19 52663718 - IGSF23 chr19 45138701 + Exonic hg19 LUSC TCGA-22-1000-01A 3 1 Out-of-frame Intra-chr q13.41 Transcription factor q13.31 76942 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF844-C3orf26 ZNF844 chr19 12184972 - C3orf26 chr3 99865817 + Exonic hg19 BLCA TCGA-G2-A3VY-01A 2 3 In-Frame Inter-chr p13.2 Transcription factor 76943 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF844-SLC4A4 ZNF844 chr19 12175691 - SLC4A4 chr4 72316905 + Exonic hg19 PRAD TCGA-HC-7819-01A 3 2 Out-of-frame Inter-chr p13.2 Transcription factor q13.3 76944 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF90-C3orf26 ZNF90 chr19 20188944 - C3orf26 chr3 99865817 + Exonic hg19 TGCT TCGA-2G-AAKL-01A 505 447 Out-of-frame Inter-chr p12 Transcription factor Seq+ 76945 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF91-ASF1B ZNF91 chr19 23578127 - ASF1B chr19 14232520 - Exonic hg19 PCPG TCGA-S7-A7WP-01A 24 26 In-Frame Intra-chr p12 Transcription factor p13.12 Seq+ 76946 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF91-CCDC88A ZNF91 chr19 23556544 - CCDC88A chr2 55523659 - Exonic hg19 LUAD TCGA-50-5946-01A 26 15 In-Frame Inter-chr p12 Transcription factor p16.1 Seq+ 76947 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF91-CCDC88A ZNF91 chr19 23556544 - CCDC88A chr2 55523659 - Exonic hg19 LUAD TCGA-50-5946-02A 16 10 In-Frame Inter-chr p12 Transcription factor p16.1 Seq+ 76948 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNF91-NANOS3 ZNF91 chr19 23578127 - NANOS3 chr19 13991256 + Exonic hg19 LGG TCGA-S9-A7IZ-01A 11 2 Out-of-frame Intra-chr p12 Transcription factor p13.12 76949 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNFX1-C20orf152 ZNFX1 chr20 47886479 - C20orf152 chr20 34560551 + Exonic hg19 BRCA TCGA-E9-A5UP-01A 4 3 Out-of-frame Intra-chr q13.13 76950 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNHIT1-PPP1R1B ZNHIT1 chr7 100861498 - PPP1R1B chr17 37791860 + Exonic hg19 BRCA TCGA-E2-A1LE-01A 7 15 In-Frame Inter-chr q22.1 q12 Tumor suppressor gene Seq+ 76951 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNHIT3-WDR60 ZNHIT3 chr17 34842810 - WDR60 chr7 158715068 + Exonic hg19 BLCA TCGA-FD-A6TG-01A 35 19 In-Frame Inter-chr q12 q36.3 Seq+ 76952 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNHIT6-ANKRD26 ZNHIT6 chr1 86167840 - ANKRD26 chr10 27322306 - Exonic hg19 BRCA TCGA-C8-A12L-01A 8 1 Out-of-frame Inter-chr p22.3 p12.1 76953 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNRF1-BCAS4 ZNRF1 chr16 75033993 - BCAS4 chr20 49434748 + Exonic hg19 BRCA TCGA-E9-A1NE-01A 9 4 Out-of-frame Inter-chr q23.1 q13.13 Seq+ 76954 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNRF2-BBS9 ZNRF2 chr7 30395449 - BBS9 chr7 33303902 + Exonic hg19 PRAD TCGA-V1-A9ZK-01A 12 14 In-Frame Intra-chr p14.3 p14.3 Seq+ 76955 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNRF2-C7orf41 ZNRF2 chr7 30363353 - C7orf41 chr7 30197054 + Exonic hg19 BRCA TCGA-AR-A1AJ-01A 6 2 Out-of-frame Intra-chr p14.3 Seq+ 76956 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNRF3-ASCC2 ZNRF3 chr22 29280054 - ASCC2 chr22 30221246 - Exonic hg19 BRCA TCGA-A8-A094-01A 145 128 In-Frame Intra-chr q12.1 q12.2 Seq+ 76957 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNRF3-CRYBB2 ZNRF3 chr22 29280054 - CRYBB2 chr22 25617371 + Exonic hg19 LGG TCGA-HT-A74H-01A 34 18 5'UTR-5'UTR Intra-chr q12.1 q11.23 Seq+ 76958 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNRF3-FAM19A5 ZNRF3 chr22 29383189 - FAM19A5 chr22 49042409 + Exonic hg19 SARC TCGA-DX-A3LT-01A 8 3 Out-of-frame Intra-chr q12.1 q13.32 Seq+ 76959 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNRF3-MED15 ZNRF3 chr22 29280054 - MED15 chr22 20891404 + Exonic hg19 LUSC TCGA-43-6143-01A 17 6 Out-of-frame Intra-chr q12.1 q11.21 Seq+ 76960 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNRF3-MYO18B ZNRF3 chr22 29280054 - MYO18B chr22 26219472 + Exonic hg19 THYM TCGA-ZB-A963-01A 2 1 Out-of-frame Intra-chr q12.1 q12.1 Tumor suppressor gene 76961 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZNRF3-XBP1 ZNRF3 chr22 29280054 - XBP1 chr22 29195141 - Exonic hg19 SKCM TCGA-EB-A42Z-01A 9 3 Out-of-frame Intra-chr q12.1 q12.1 Transcription factor 76962 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZPBP-C7orf10 ZPBP chr7 50129225 - C7orf10 chr7 40789033 + Exonic hg19 LUSC TCGA-85-8354-01A 14 4 Out-of-frame Intra-chr p12.2 76963 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZPLD1-FAM55C ZPLD1 chr3 101948185 - FAM55C chr3 101535639 + Exonic hg19 BRCA TCGA-AN-A0FW-01A 23 13 5'UTR-CDS Intra-chr q12.3 76964 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZRANB1-LHPP ZRANB1 chr10 126672257 - LHPP chr10 126301833 + Exonic hg19 CESC TCGA-DS-A7WH-01A 7 11 In-Frame Intra-chr q26.13 q26.13 Seq+ 76965 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZRANB3-LCT ZRANB3 chr2 136288697 - LCT chr2 136567563 - Exonic hg19 LIHC TCGA-ZS-A9CF-02A 2 2 5'UTR-CDS Intra-chr q21.3 q21.3 76966 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZRANB3-TMEM163 ZRANB3 chr2 136288697 - TMEM163 chr2 135309662 - Exonic hg19 PRAD TCGA-KK-A7B4-01A 3 11 5'UTR-CDS Intra-chr q21.3 q21.3 Seq+ 76967 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZSCAN18-ATP9B ZSCAN18 chr19 58609482 - ATP9B chr18 77063604 + Exonic hg19 LGG TCGA-E1-A7YL-01A 20 4 5'UTR-CDS Inter-chr q13.43 Transcription factor Seq+ 76968 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZSCAN29-MGMT ZSCAN29 chr15 43661794 - MGMT chr10 131506159 + Exonic hg19 BRCA TCGA-AO-A03P-01A 15 2 Out-of-frame Inter-chr q15.3 Transcription factor q26.3 Seq+ 76969 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZSCAN5A-DKKL1 ZSCAN5A chr19 56824652 - DKKL1 chr19 49877974 + Exonic hg19 SKCM TCGA-D3-A2JE-06A 8 125 5'UTR-CDS Intra-chr q13.43 Transcription factor q13.33 Seq+ 76970 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZSCAN5A-GALP ZSCAN5A chr19 56824652 - GALP chr19 56688439 + Exonic hg19 LUSC TCGA-21-5783-01A 6 4 5'UTR-5'UTR Intra-chr q13.43 Transcription factor q13.43 76971 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZSWIM3-PTPRT ZSWIM3 chr20 44486619 - PTPRT chr20 41514572 - Exonic hg19 SKCM TCGA-YG-AA3P-06A 4 1 Out-of-frame Intra-chr q13.12 q13.11 Oncogene Tumor suppressor gene Seq+ 76972 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZSWIM4-CCDC130 ZSWIM4 chr19 13934314 - CCDC130 chr19 13862422 + Exonic hg19 LUAD TCGA-38-4630-01A 48 27 CDS-5'UTR Intra-chr p13.13 p13.13 Seq+ 76973 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZSWIM4-CCDC130 ZSWIM4 chr19 13930306 - CCDC130 chr19 13865103 + Exonic hg19 LUSC TCGA-60-2703-01A 6 2 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 76974 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZSWIM4-CCDC130 ZSWIM4 chr19 13930306 - CCDC130 chr19 13867011 + Exonic hg19 UCS TCGA-N5-A4R8-01A 10 5 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 76975 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZSWIM4-SLC1A6 ZSWIM4 chr19 13910735 - SLC1A6 chr19 15083729 - Exonic hg19 LUSC TCGA-46-6026-01A 5 4 Out-of-frame Intra-chr p13.13 p13.12 Seq+ 76976 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZSWIM6-CWC27 ZSWIM6 chr5 60628775 - CWC27 chr5 64181270 + Exonic hg19 PRAD TCGA-J9-A52D-01A 7 7 Out-of-frame Intra-chr q12.1 q12.3 Seq+ 76977 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZSWIM6-NDUFAF2 ZSWIM6 chr5 60628775 - NDUFAF2 chr5 60394819 + Exonic hg19 SKCM TCGA-FS-A4FC-06A 5 7 In-Frame Intra-chr q12.1 q12.1 Seq+ 76978 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZW10-UPK2 ZW10 chr11 113639555 - UPK2 chr11 118828308 + Exonic hg19 BLCA TCGA-4Z-AA84-01A 9 7 Out-of-frame Intra-chr q23.2 q23.3 Seq+ 76979 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZWILCH-ATG16L2 ZWILCH chr15 66825351 - ATG16L2 chr11 72553662 + Exonic hg19 BRCA TCGA-E9-A22G-01A 16 15 Out-of-frame Inter-chr q22.31 q13.4 Seq+ 76980 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZXDC-UROC1 ZXDC chr3 126184998 - UROC1 chr3 126201328 - Exonic hg19 ACC TCGA-OR-A5LD-01A 9 4 Out-of-frame Intra-chr q21.3 Transcription factor q21.3 Seq+ 76981 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZZEF1-ANKFY1 ZZEF1 chr17 4045836 - ANKFY1 chr17 4084667 - Exonic hg19 KIRC TCGA-CJ-4894-01A 21 8 In-Frame Intra-chr p13.2 p13.2 Seq+ 76982 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZZZ3-AK5 ZZZ3 chr1 78148947 - AK5 chr1 77984249 + Exonic hg19 CESC TCGA-WL-A834-01A 7 3 5'UTR-CDS Intra-chr p31.1 Transcription factor p31.1 76983 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZZZ3-CDH1 ZZZ3 chr1 78148947 - CDH1 chr16 68835573 + Exonic hg19 STAD TCGA-BR-4255-01A 4 36 5'UTR-CDS Inter-chr p31.1 Transcription factor q22.1 Oncogene Tumor suppressor gene Seq+ 76984 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZZZ3-CXCL11 ZZZ3 chr1 78148947 - CXCL11 chr4 76957217 - Exonic hg19 PRAD TCGA-VP-A87K-01A 23 17 Out-of-frame Inter-chr p31.1 Transcription factor q21.1 Seq+ 76985 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZZZ3-NCK1 ZZZ3 chr1 78148270 - NCK1 chr3 136646826 + Exonic hg19 BRCA TCGA-AC-A6IW-01A 2 2 5'UTR-5'UTR Inter-chr p31.1 Transcription factor q22.3 76986 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZZZ3-USP33 ZZZ3 chr1 78148270 - USP33 chr1 78167156 - Exonic hg19 UCS TCGA-NA-A4QV-01A 60 18 5'UTR-CDS Intra-chr p31.1 Transcription factor p31.1 Tumor suppressor gene Seq+ 76987 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq ZZZ3-USP33 ZZZ3 chr1 78148947 - USP33 chr1 78167156 - Exonic hg19 CESC TCGA-WL-A834-01A 30 15 5'UTR-CDS Intra-chr p31.1 Transcription factor p31.1 Tumor suppressor gene Seq+ 76988 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PABPC1L-YWHAB PABPC1L chr20 43566831 + YWHAB chr20 43530171 + Exonic hg19 CESC TCGA-FU-A23L-01A 18 CDS-5'UTR Intra-chr q13.12 q13.12 KB Seq+ 76989 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FGFR1-TACC1 FGFR1 chr8 38314873 - TACC1 chr8 38630161 - Exonic hg19 UCEC TCGA-AP-A5FX-01A 131 5'UTR-5'UTR Intra-chr p11.23 TK:FGFR Oncogene p11.22 KB Pub Seq+ 76990 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205648939 - ERG chr21 39817543 - Exonic hg19 PRAD TCGA-G9-6351-01A 153 5'UTR-5'UTR Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 76991 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649521 - ERG chr21 39817543 - Exonic hg19 PRAD TCGA-G9-6351-01A 153 5'UTR-5'UTR Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 76992 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205648939 - ETV1 chr7 14017104 - Exonic hg19 PRAD TCGA-J4-A83M-01A 229 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 76993 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649521 - ETV1 chr7 14017104 - Exonic hg19 PRAD TCGA-J4-A83M-01A 229 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 76994 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649521 - ETV1 chr7 13978870 - Exonic hg19 PRAD TCGA-KK-A7AP-01A 991 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 76995 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649521 - ERG chr21 39817543 - Exonic hg19 PRAD TCGA-HC-7820-01A 238 5'UTR-5'UTR Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 76996 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42870045 - ETV4 chr17 41623035 - Exonic hg19 PRAD TCGA-HC-7077-01A 1096 CDS-5'UTR Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 76997 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41622734 - Exonic hg19 PRAD TCGA-HC-7077-01A 1047 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 76998 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41623035 - Exonic hg19 PRAD TCGA-HC-7077-01A 1047 5'UTR-5'UTR Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 76999 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ETV5 TMPRSS2 chr21 42866282 - ETV5 chr3 185823730 - Exonic hg19 PRAD TCGA-ZG-A9L5-01A 1543 CDS-5'UTR Inter-chr q22.3 q27.2 Oncogene Transcription factor KB Pub Seq+ 77000 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ETV5 TMPRSS2 chr21 42880007 - ETV5 chr3 185823730 - Exonic hg19 PRAD TCGA-ZG-A9L5-01A 327 5'UTR-5'UTR Inter-chr q22.3 q27.2 Oncogene Transcription factor KB Pub Seq+ 77001 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41622734 - Exonic hg19 PRAD TCGA-KC-A7FD-01A 361 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 77002 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41622737 - Exonic hg19 PRAD TCGA-KC-A7FD-01A 361 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 77003 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41623035 - Exonic hg19 PRAD TCGA-KC-A7FD-01A 361 5'UTR-5'UTR Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 77004 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42880007 - ETV1 chr7 13978870 - Exonic hg19 PRAD TCGA-EJ-5501-01A 1249 5'UTR-CDS Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 77005 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649521 - ERG chr21 39817543 - Exonic hg19 PRAD TCGA-KK-A8I5-01A 114 5'UTR-5'UTR Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 77006 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ETV5 TMPRSS2 chr21 42861433 - ETV5 chr3 185823730 - Exonic hg19 PRAD TCGA-KK-A7AZ-01A 173 CDS-5'UTR Inter-chr q22.3 q27.2 Oncogene Transcription factor KB Pub Seq+ 77007 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42880007 - ETV1 chr7 13978870 - Exonic hg19 PRAD TCGA-YL-A8SC-01A 510 5'UTR-CDS Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 77008 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649521 - ETV1 chr7 13978870 - Exonic hg19 PRAD TCGA-M7-A71Y-01A 153 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 77009 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649521 - ERG chr21 39817543 - Exonic hg19 PRAD TCGA-J4-A83N-01A 230 5'UTR-5'UTR Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 77010 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42880007 - ETV1 chr7 13978870 - Exonic hg19 PRAD TCGA-EJ-7788-01A 1076 5'UTR-CDS Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 77011 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649521 - ERG chr21 39817543 - Exonic hg19 PRAD TCGA-HC-7821-01A 171 5'UTR-5'UTR Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 77012 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649521 - ETV1 chr7 13978870 - Exonic hg19 PRAD TCGA-HC-A8CY-01A 1029 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 77013 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649521 - ERG chr21 39817543 - Exonic hg19 PRAD TCGA-G9-7522-01A 266 5'UTR-5'UTR Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 77014 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42880007 - ETV1 chr7 13971373 - Exonic hg19 PRAD TCGA-HC-7818-01A 163 5'UTR-CDS Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 77015 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649521 - ERG chr21 39817543 - Exonic hg19 PRAD TCGA-HC-A6AN-01A 229 5'UTR-5'UTR Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 77016 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205649521 - ERG chr21 39817543 - Exonic hg19 PRAD TCGA-HC-7748-01A 492 5'UTR-5'UTR Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 77017 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42880007 - ETV4 chr17 41622734 - Exonic hg19 PRAD TCGA-G9-6371-01A 176 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 77018 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649521 - ETV1 chr7 13978870 - Exonic hg19 PRAD TCGA-2A-A8W3-01A 1406 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 77019 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ETV5 TMPRSS2 chr21 42880007 - ETV5 chr3 185823730 - Exonic hg19 PRAD TCGA-KK-A7AZ-01A 44 5'UTR-5'UTR Inter-chr q22.3 q27.2 Oncogene Transcription factor KB Pub Seq+ 77020 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205649521 - ETV1 chr7 13978870 - Exonic hg19 PRAD TCGA-HC-A6AQ-01A 32 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 77021 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EML4-ALK EML4 chr2 42492090 + ALK chr2 29446393 - Exonic hg19 LUAD TCGA-50-8460-01A 14 Out-of-Frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 77022 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EML4-ALK EML4 chr2 42492090 + ALK chr2 29446393 - Exonic hg19 LUAD TCGA-67-6216-01A 12 Out-of-Frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 77023 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EML4-ALK EML4 chr2 42491870 + ALK chr2 29446393 - Exonic hg19 LUAD TCGA-67-6216-01A 12 In-Frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 77024 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EML4-ALK EML4 chr2 42491870 + ALK chr2 29446393 - Exonic hg19 LUAD TCGA-67-6215-01A 37 In-Frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 77025 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 61665879 - RET chr10 43612031 + Exonic hg19 LUAD TCGA-75-6203-01A 17 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 77026 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EML4-ALK EML4 chr2 42522655 + ALK chr2 29446393 - Exonic hg19 LUAD TCGA-78-7163-01A 89 In-Frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 77027 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808660 + TACC3 chr4 1732898 + Exonic hg19 LGG TCGA-P5-A72U-01A 1365 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 77028 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808660 + TACC3 chr4 1741428 + Exonic hg19 LGG TCGA-FG-7643-01A 6317 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 77029 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PDGFRA-FIP1L1 PDGFRA chr4 55156720 + FIP1L1 chr4 54310214 + Exonic hg19 LGG TCGA-E1-A7YI-01A 9941 In-Frame Intra-chr q12 Oncogene q12 KB Seq+ 77030 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC34A2-ROS1 SLC34A2 chr4 25678323 + ROS1 chr6 117650608 - Exonic hg19 LUAD TCGA-62-A46Y-01A 703 Out-of-Frame Inter-chr p15.2 q22.1 Oncogene KB Pub Seq+ 77031 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808660 + TACC3 chr4 1737457 + Exonic hg19 CESC TCGA-WL-A834-01A 2405 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 77032 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808660 + TACC3 chr4 1741428 + Exonic hg19 BLCA TCGA-E7-A5KE-01A 2831 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 77033 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808660 + TACC3 chr4 1737457 + Exonic hg19 BLCA TCGA-CF-A8HY-01A 839 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 77034 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EZR-ROS1 EZR chr6 159191795 - ROS1 chr6 117645577 - Exonic hg19 LUAD TCGA-55-6986-01A 213 In-Frame Intra-chr q25.3 q22.1 Oncogene KB Pub Seq+ 77035 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC34A2-ROS1 SLC34A2 chr4 25678323 + ROS1 chr6 117650608 - Exonic hg19 LUAD TCGA-05-4426-01A 2350 Out-of-Frame Inter-chr p15.2 q22.1 Oncogene KB Pub Seq+ 77036 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC34A2-ROS1 SLC34A2 chr4 25678323 + ROS1 chr6 117645577 - Exonic hg19 LUAD TCGA-05-4426-01A 831 Out-of-Frame Inter-chr p15.2 q22.1 Oncogene KB Pub Seq+ 77037 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CD74-ROS1 CD74 chr5 149784242 - ROS1 chr6 117645577 - Exonic hg19 LUAD TCGA-64-1680-01A 171 In-Frame Inter-chr q33.1 q22.1 Oncogene KB Pub Seq+ 77038 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FIP1L1-PDGFRA FIP1L1 chr4 54310214 - PDGFRA chr4 55156649 + Exonic hg19 LGG TCGA-E1-A7YI-01A 13 Out-of-Frame Intra-chr q12 q12 Oncogene KB Pub 77039 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FIP1L1-PDGFRA FIP1L1 chr4 54319107 - PDGFRA chr4 55156689 + Exonic hg19 LGG TCGA-E1-A7YI-01A 14 Out-of-Frame Intra-chr q12 q12 Oncogene KB Pub 77040 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CD74-ROS1 CD74 chr5 149784242 - ROS1 chr6 117645577 - Exonic hg19 LUAD TCGA-86-8278-01A 212 In-Frame Inter-chr q33.1 q22.1 Oncogene KB Pub Seq+ 77041 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74315748 + RARA chr17 38499047 + Exonic hg19 LAML TCGA-AB-2823-03A 16 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77042 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74315748 + RARA chr17 38504567 + Exonic hg19 LAML TCGA-AB-2823-03A 16 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77043 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74315748 + RARA chr17 38504567 + Exonic hg19 LAML TCGA-AB-2840-03A 14 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77044 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74315748 + RARA chr17 38504567 + Exonic hg19 LAML TCGA-AB-2980-03A 15 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77045 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74315748 + RARA chr17 38504567 + Exonic hg19 LAML TCGA-AB-2991-03A 45 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77046 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74315748 + RARA chr17 38504567 + Exonic hg19 LAML TCGA-AB-2998-03A 18 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77047 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74315748 + RARA chr17 38499005 + Exonic hg19 LAML TCGA-AB-3001-03A 28 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77048 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74315748 + RARA chr17 38504567 + Exonic hg19 LAML TCGA-AB-3001-03A 28 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77049 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74315748 + RARA chr17 38499005 + Exonic hg19 LAML TCGA-AB-3001-03A 24 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77050 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74315748 + RARA chr17 38504567 + Exonic hg19 LAML TCGA-AB-3007-03A 27 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77051 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74315748 + RARA chr17 38504567 + Exonic hg19 LAML TCGA-AB-3007-03A 26 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77052 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74317267 + RARA chr17 38504567 + Exonic hg19 LAML TCGA-AB-2897-03A 24 Out-of-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77053 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74325754 + RARA chr17 38504567 + Exonic hg19 LAML TCGA-AB-2862-03A 41 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77054 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74325754 + RARA chr17 38504567 + Exonic hg19 LAML TCGA-AB-2897-03A 21 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77055 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74325754 + RARA chr17 38504567 + Exonic hg19 LAML TCGA-AB-2982-03B 16 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77056 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74325754 + RARA chr17 38504567 + Exonic hg19 LAML TCGA-AB-2982-03B 8 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77057 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74325754 + RARA chr17 38504567 + Exonic hg19 LAML TCGA-AB-2994-03A 17 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77058 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74325754 + RARA chr17 38504567 + Exonic hg19 LAML TCGA-AB-2999-03B 3 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77059 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74325762 + RARA chr17 38504567 + Exonic hg19 LAML TCGA-AB-2862-03A 41 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77060 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74325762 + RARA chr17 38504567 + Exonic hg19 LAML TCGA-AB-2872-03A 12 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77061 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74325762 + RARA chr17 38504567 + Exonic hg19 LAML TCGA-AB-2994-03A 17 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77062 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74325861 + RARA chr17 38495607 + Exonic hg19 LAML TCGA-AB-2897-03A 19 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77063 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74325947 + RARA chr17 38492306 + Exonic hg19 LAML TCGA-AB-2872-03A 6 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77064 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74326174 + RARA chr17 38494414 + Exonic hg19 LAML TCGA-AB-2803-03A 4 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77065 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74326442 + RARA chr17 38496872 + Exonic hg19 LAML TCGA-AB-2982-03B 8 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77066 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74326459 + RARA chr17 38498831 + Exonic hg19 LAML TCGA-AB-2994-03A 16 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77067 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PML-RARA PML chr15 74326513 + RARA chr17 38502175 + Exonic hg19 LAML TCGA-AB-2862-03A 41 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 77068 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42870045 - ETV4 chr17 41622734 - Exonic hg19 PRAD TCGA-HC-7077-01A 1096 In-Frame Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 77069 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NDRG1-ERG NDRG1 chr8 134292474 - ERG chr21 39942835 - Exonic hg19 PRAD TCGA-KK-A8I6-01A 105 In-Frame Inter-chr q24.22 Tumor suppressor gene q22.2 Oncogene Transcription factor KB Pub Seq+ 77070 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KLK2-ETV1 KLK2 chr19 51376774 + ETV1 chr7 13950931 - Exonic hg19 PRAD TCGA-ZG-A9LY-01A 148 In-Frame Inter-chr q13.33 p21.2 Oncogene Transcription factor KB Seq+ 77071 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KLK2-ETV1 KLK2 chr19 51376774 + ETV1 chr7 13971373 - Exonic hg19 PRAD TCGA-ZG-A9LY-01A 4810 Out-of-Frame Inter-chr q13.33 p21.2 Oncogene Transcription factor KB Seq+ 77072 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KLK2-ETV1 KLK2 chr19 51378135 + ETV1 chr7 13971373 - Exonic hg19 PRAD TCGA-ZG-A9LY-01A 4810 In-Frame Inter-chr q13.33 p21.2 Oncogene Transcription factor KB Seq+ 77073 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42879876 - ETV1 chr7 13978870 - Exonic hg19 PRAD TCGA-YL-A8SC-01A 510 In-Frame Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 77074 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42870045 - ETV1 chr7 13978870 - Exonic hg19 PRAD TCGA-EJ-7788-01A 1067 Out-of-Frame Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 77075 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42866282 - ETV1 chr7 13971373 - Exonic hg19 PRAD TCGA-HC-7818-01A 859 Out-of-Frame Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 77076 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42870045 - ETV1 chr7 13971373 - Exonic hg19 PRAD TCGA-HC-7818-01A 873 Out-of-Frame Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 77077 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NDRG1-ERG NDRG1 chr8 134292474 - ERG chr21 39817543 - Exonic hg19 PRAD TCGA-EJ-7314-01A 158 In-Frame Inter-chr q24.22 Tumor suppressor gene q22.2 Oncogene Transcription factor KB Pub Seq+ 77078 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 42879876 - ETV4 chr17 41622734 - Exonic hg19 PRAD TCGA-G9-6371-01A 176 Out-of-Frame Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 77079 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MYB-NFIB MYB chr6 135521552 + NFIB chr9 14307518 - Exonic hg19 BRCA TCGA-A1-A0SB-01A 108 In-Frame Inter-chr q23.3 Oncogene Transcription factor p22.3 Transcription factor KB Pub Seq+ 77080 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808650 + TACC3 chr4 1737483 + Exonic hg19 LUSC TCGA-39-5024-01A 2007 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 77081 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808660 + TACC3 chr4 1741428 + Exonic hg19 LUSC TCGA-39-5024-01A 2007 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 77082 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1808660 + TACC3 chr4 1741428 + Exonic hg19 LUSC TCGA-66-2786-01A 8183 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 77083 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NDRG1-ERG NDRG1 chr8 134292474 - ERG chr21 39817543 - Exonic hg19 PRAD TCGA-KK-A8I6-01A 89 In-Frame Inter-chr q24.22 Tumor suppressor gene q22.2 Oncogene Transcription factor KB Pub Seq+ 77084 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NDRG1-ERG NDRG1 chr8 134292474 - ERG chr21 39817543 - Exonic hg19 PRAD TCGA-V1-A8WW-01A 99 In-Frame Inter-chr q24.22 Tumor suppressor gene q22.2 Oncogene Transcription factor KB Pub Seq+ 77085 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NDRG1-ERG NDRG1 chr8 134292474 - ERG chr21 39817543 - Exonic hg19 PRAD TCGA-EJ-7314-11A 4 In-Frame Inter-chr q24.22 Tumor suppressor gene q22.2 Oncogene Transcription factor KB Pub Seq+ 77086 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ETV1 TMPRSS2 chr21 42866282 - ETV1 chr7 13950931 - Exonic hg19 PRAD TCGA-HC-7818-01A 87 In-Frame Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 77087 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERC1-RET ERC1 chr12 1250952 + RET chr10 43612031 + Exonic hg19 BRCA TCGA-C8-A1HJ-01A 19 In-Frame Inter-chr q11.21 TK:Ret Oncogene KB Seq+ 77088 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ABL1-NUP214 ABL1 chr9 133589841 + NUP214 chr9 134007982 + Exonic hg19 BRCA TCGA-D8-A1JC-01A 11 Out-of-Frame Intra-chr q34.12 TK:Abl Oncogene q34.13 Oncogene Pub Seq+ 77089 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ABL1-NUP214 ABL1 chr9 133658011 - NUP214 chr9 134007982 + Exonic hg19 BRCA TCGA-D8-A1JC-01A 8 Out-of-Frame Intra-chr q34.12 TK:Abl Oncogene q34.13 Oncogene Pub Seq+ 77090 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 12022902 + NTRK3 chr15 88483983 - Exonic hg19 BRCA TCGA-AO-A03U-01B 59 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 77091 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165877 - PPP1CA chr11 67166287 - Exonic hg19 LUAD TCGA-L4-A4E6-01A 5 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77092 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018182 + COL1A1 chr17 48261743 - Exonic hg19 LUAD TCGA-99-8032-01A 7 3'UTR-3'UTR Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77093 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32150459 + SFTPA2 chr10 81316167 - Exonic hg19 LUAD TCGA-44-2662-11A 30 3'UTR-3'UTR Inter-chr q22.3 77094 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32150458 + SFTPA2 chr10 81315701 - Exonic hg19 LUAD TCGA-44-2662-11A 30 3'UTR-3'UTR Inter-chr q22.3 77095 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32150426 + SFTPA2 chr10 81316985 - Exonic hg19 LUAD TCGA-44-2662-11A 30 Out-of-Frame Inter-chr q22.3 77096 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32151763 + SFTPA2 chr10 81316253 - Exonic hg19 LUAD TCGA-44-6776-11A 13 3'UTR-3'UTR Inter-chr q22.3 77097 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32151418 + SFTPA2 chr10 81316347 - Exonic hg19 LUAD TCGA-44-6777-11A 7 3'UTR-3'UTR Inter-chr q22.3 77098 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUAD TCGA-55-6984-01A 16 5'UTR-5'UTR Inter-chr q24.33 q13.33 77099 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32148980 + SFTPA2 chr10 81316621 - Exonic hg19 LUAD TCGA-55-6986-11A 12 3'UTR-3'UTR Inter-chr q22.3 77100 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ITGB1BP1-CPSF3 ITGB1BP1 chr2 9563501 - CPSF3 chr2 9563850 + Exonic hg19 LUAD TCGA-05-4397-01A 6 5'UTR-5'UTR Intra-chr p25.1 p25.1 77101 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32152028 + SFTPA2 chr10 81316569 - Exonic hg19 LUAD TCGA-44-2661-11A 19 3'UTR-3'UTR Inter-chr q22.3 77102 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32150795 + SFTPA2 chr10 81316766 - Exonic hg19 LUAD TCGA-44-2661-11A 19 3'UTR-3'UTR Inter-chr q22.3 77103 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32150445 + SFTPA2 chr10 81316181 - Exonic hg19 LUAD TCGA-44-6778-11A 13 3'UTR-3'UTR Inter-chr q22.3 77104 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUAD TCGA-05-4397-01A 25 5'UTR-5'UTR Inter-chr q24.33 q13.33 77105 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUAD TCGA-50-6593-01A 13 5'UTR-5'UTR Inter-chr q24.33 q13.33 77106 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402285 - RPS11 chr19 50000534 + Exonic hg19 LUAD TCGA-50-6594-01A 7 5'UTR-5'UTR Inter-chr q24.33 q13.33 77107 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUAD TCGA-55-7283-01A 34 5'UTR-5'UTR Inter-chr q24.33 q13.33 77108 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32150764 + SFTPA2 chr10 81316603 - Exonic hg19 LUAD TCGA-50-5939-11A 10 3'UTR-3'UTR Inter-chr q22.3 77109 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32150752 + SFTPA2 chr10 81317035 - Exonic hg19 LUAD TCGA-49-6743-11A 9 In-Frame Inter-chr q22.3 77110 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32149237 + SFTPA2 chr10 81316621 - Exonic hg19 LUAD TCGA-44-6144-11A 33 3'UTR-3'UTR Inter-chr q22.3 77111 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32150691 - SFTPA2 chr10 81315675 + Exonic hg19 LUAD TCGA-50-5939-11A 4 3'UTR-3'UTR Inter-chr q22.3 77112 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32150119 - SFTPA2 chr10 81316068 - Exonic hg19 LUAD TCGA-49-6745-11A 12 3'UTR-3'UTR Inter-chr q22.3 77113 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32149153 - SFTPA2 chr10 81316681 - Exonic hg19 LUAD TCGA-49-6745-11A 12 3'UTR-3'UTR Inter-chr q22.3 77114 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUAD TCGA-MP-A4SW-01A 33 5'UTR-5'UTR Inter-chr q24.33 q13.33 77115 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUAD TCGA-97-8176-01A 45 5'UTR-5'UTR Inter-chr q24.33 q13.33 77116 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402491 - RPS11 chr19 50000532 + Exonic hg19 LUAD TCGA-93-A4JQ-01A 94 5'UTR-5'UTR Inter-chr q24.33 q13.33 77117 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32150374 + SFTPA2 chr10 81316071 - Exonic hg19 LUAD TCGA-91-6847-11A 15 3'UTR-3'UTR Inter-chr q22.3 77118 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUAD TCGA-62-A471-01A 32 5'UTR-5'UTR Inter-chr q24.33 q13.33 77119 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 50000534 + Exonic hg19 LUAD TCGA-55-8616-01A 96 5'UTR-5'UTR Inter-chr q24.33 q13.33 77120 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUAD TCGA-78-7158-01A 32 5'UTR-5'UTR Inter-chr q24.33 q13.33 77121 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165880 - PPP1CA chr11 67166226 - Exonic hg19 LUAD TCGA-78-7539-01A 13 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77122 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTNNB1-ULK4 CTNNB1 chr3 41241160 + ULK4 chr3 41393674 + Exonic hg19 LUAD TCGA-50-5946-01A 16 5'UTR-CDS Intra-chr p22.1 Oncogene p22.1 Other:ULK 77123 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTNNB1-ULK4 CTNNB1 chr3 41241160 + ULK4 chr3 41377293 + Exonic hg19 LUAD TCGA-50-5946-01A 11 5'UTR-CDS Intra-chr p22.1 Oncogene p22.1 Other:ULK 77124 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402494 - RPS11 chr19 50001188 + Exonic hg19 LUAD TCGA-69-7973-01A 47 5'UTR-5'UTR Inter-chr q24.33 q13.33 77125 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32149373 + SFTPA2 chr10 81316256 - Exonic hg19 LUAD TCGA-55-6984-11A 68 3'UTR-3'UTR Inter-chr q22.3 77126 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SFTPB-TPT1 SFTPB chr2 85886326 - TPT1 chr13 45914858 + Exonic hg19 LUAD TCGA-97-A4M3-01A 6 3'UTR-CDS Inter-chr p11.2 q14.13 Seq+ 77127 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402503 - RPS11 chr19 50001191 + Exonic hg19 LUAD TCGA-78-7156-01A 12 5'UTR-5'UTR Inter-chr q24.33 q13.33 77128 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32149382 + SFTPA2 chr10 81316248 - Exonic hg19 LUAD TCGA-44-6147-11A 6 3'UTR-3'UTR Inter-chr q22.3 77129 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUAD TCGA-J2-8192-01A 10 5'UTR-5'UTR Inter-chr q24.33 q13.33 77130 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUAD TCGA-05-4418-01A 64 5'UTR-5'UTR Inter-chr q24.33 q13.33 77131 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SFTPB-TPT1 SFTPB chr2 85886357 - TPT1 chr13 45913728 - Exonic hg19 LUAD TCGA-35-3615-01A 15 3'UTR-CDS Inter-chr p11.2 q14.13 Seq+ 77132 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32151407 + SFTPA2 chr10 81315841 - Exonic hg19 LUAD TCGA-50-5935-11A 8 3'UTR-3'UTR Inter-chr q22.3 77133 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402498 - RPS11 chr19 50001370 + Exonic hg19 LUAD TCGA-55-6642-01A 25 5'UTR-5'UTR Inter-chr q24.33 q13.33 77134 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUAD TCGA-49-6767-01A 29 5'UTR-5'UTR Inter-chr q24.33 q13.33 77135 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUAD TCGA-44-2668-01A 10 5'UTR-5'UTR Inter-chr q24.33 q13.33 77136 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32151343 - SFTPA2 chr10 81318672 - Exonic hg19 LUAD TCGA-50-5930-11A 5 In-Frame Inter-chr q22.3 77137 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUAD TCGA-97-8174-01A 83 5'UTR-5'UTR Inter-chr q24.33 q13.33 77138 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUAD TCGA-78-7163-01A 56 5'UTR-5'UTR Inter-chr q24.33 q13.33 77139 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUAD TCGA-MN-A4N4-01A 25 5'UTR-5'UTR Inter-chr q24.33 q13.33 77140 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUAD TCGA-73-4659-01A 56 5'UTR-5'UTR Inter-chr q24.33 q13.33 77141 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUAD TCGA-55-7570-01A 17 5'UTR-5'UTR Inter-chr q24.33 q13.33 77142 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32151760 + SFTPA2 chr10 81316256 - Exonic hg19 LUAD TCGA-55-6983-11A 15 3'UTR-3'UTR Inter-chr q22.3 77143 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402491 - RPS11 chr19 50000814 + Exonic hg19 LUAD TCGA-93-A4JN-01A 30 5'UTR-5'UTR Inter-chr q24.33 q13.33 77144 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018382 + COL1A1 chr17 48262789 - Exonic hg19 LUAD TCGA-86-8054-01A 32 3'UTR-3'UTR Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77145 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SFTPB-TPT1 SFTPB chr2 85889163 - TPT1 chr13 45915297 - Exonic hg19 LUAD TCGA-97-8172-01A 4 CDS-5'UTR Inter-chr p11.2 q14.13 Seq+ 77146 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402503 - RPS11 chr19 50001191 + Exonic hg19 LUAD TCGA-38-4627-11A 95 5'UTR-5'UTR Inter-chr q24.33 q13.33 77147 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUAD TCGA-50-5942-01A 46 5'UTR-5'UTR Inter-chr q24.33 q13.33 77148 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402287 - RPS11 chr19 50000535 + Exonic hg19 LUAD TCGA-50-5942-01A 46 5'UTR-5'UTR Inter-chr q24.33 q13.33 77149 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUAD TCGA-55-8205-01A 40 5'UTR-5'UTR Inter-chr q24.33 q13.33 77150 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32150667 - SFTPA2 chr10 81316764 - Exonic hg19 LUAD TCGA-44-6148-11A 6 3'UTR-3'UTR Inter-chr q22.3 77151 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402500 - RPS11 chr19 50001203 + Exonic hg19 LUAD TCGA-55-6972-01A 35 5'UTR-5'UTR Inter-chr q24.33 q13.33 77152 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUAD TCGA-44-8120-01A 40 5'UTR-5'UTR Inter-chr q24.33 q13.33 77153 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32149376 + SFTPA2 chr10 81316749 - Exonic hg19 LUAD TCGA-44-2665-11A 34 3'UTR-3'UTR Inter-chr q22.3 77154 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32148779 - SFTPA2 chr10 81316255 - Exonic hg19 LUAD TCGA-44-2665-11A 12 3'UTR-3'UTR Inter-chr q22.3 77155 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402416 - RPS11 chr19 50001192 + Exonic hg19 LUAD TCGA-75-5126-01A 20 5'UTR-5'UTR Inter-chr q24.33 q13.33 77156 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUAD TCGA-73-4675-01A 40 5'UTR-5'UTR Inter-chr q24.33 q13.33 77157 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUAD TCGA-44-2661-01A 80 5'UTR-5'UTR Inter-chr q24.33 q13.33 77158 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUAD TCGA-55-7227-01A 13 5'UTR-5'UTR Inter-chr q24.33 q13.33 77159 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUAD TCGA-44-2661-01A 80 5'UTR-5'UTR Inter-chr q24.33 q13.33 77160 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GAPDH-SERPINA1 GAPDH chr12 6647470 - SERPINA1 chr14 94844936 - Exonic hg19 LUAD TCGA-97-8175-01A 4 3'UTR-CDS Inter-chr p13.31 q32.13 77161 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUAD TCGA-MP-A4TJ-01A 11 5'UTR-5'UTR Inter-chr q24.33 q13.33 77162 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUAD TCGA-MP-A4SY-01A 19 5'UTR-5'UTR Inter-chr q24.33 q13.33 77163 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NCKAP1-NUP35 NCKAP1 chr2 183859566 - NUP35 chr2 183983416 - Exonic hg19 LUAD TCGA-99-8032-01A 174 CDS-5'UTR Intra-chr q32.1 q32.1 77164 ChimerSeq Tophat-Fusion TCGA_RNA-Seq USP49-RAB26 USP49 chr6 41764185 - RAB26 chr16 2201510 - Exonic hg19 ACC TCGA-OR-A5JF-01A 1020 3'UTR-CDS Inter-chr p21.1 p13.3 77165 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GABRA5-NOV GABRA5 chr15 27114480 + NOV chr8 120428625 + Exonic hg19 ACC TCGA-OR-A5JY-01A 245 CDS-5'UTR Inter-chr q12 q24.12 Tumor suppressor gene Seq+ 77166 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSNAXIP1-CENPT TSNAXIP1 chr16 67860865 - CENPT chr16 67880887 - Exonic hg19 ACC TCGA-OR-A5K2-01A 103 CDS-5'UTR Intra-chr q22.1 q22.1 Transcription factor 77167 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSNAXIP1-CENPT TSNAXIP1 chr16 67861151 - CENPT chr16 67881358 - Exonic hg19 ACC TCGA-OR-A5K2-01A 103 CDS-5'UTR Intra-chr q22.1 q22.1 Transcription factor 77168 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIF13B-FRS2 KIF13B chr8 28960818 - FRS2 chr12 69931760 - Exonic hg19 ACC TCGA-OR-A5KX-01A 102 CDS-5'UTR Inter-chr p12 q15 77169 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIF13B-FRS2 KIF13B chr8 28960820 - FRS2 chr12 69925835 - Exonic hg19 ACC TCGA-OR-A5KX-01A 102 CDS-5'UTR Inter-chr p12 q15 77170 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERGIC3-CEP250 ERGIC3 chr20 34145318 + CEP250 chr20 34074494 + Exonic hg19 ACC TCGA-OR-A5JM-01A 419 3'UTR-CDS Intra-chr q11.22 q11.22 77171 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRLR-CLPTM1L PRLR chr5 35230369 - CLPTM1L chr5 1318567 - Exonic hg19 ACC TCGA-OR-A5J1-01A 104 5'UTR-CDS Intra-chr p13.2 p15.33 Seq+ 77172 ChimerSeq Tophat-Fusion TCGA_RNA-Seq QRICH1-HEATR4 QRICH1 chr3 49114141 - HEATR4 chr14 74009753 + Exonic hg19 ACC TCGA-OR-A5LO-01A 182 CDS-5'UTR Inter-chr p21.31 q24.3 77173 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UHMK1-KCNS3 UHMK1 chr1 162473637 + KCNS3 chr2 18101165 - Exonic hg19 ACC TCGA-OR-A5LL-01A 195 CDS-5'UTR Inter-chr q23.3 p24.2 77174 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HNRNPA1-FLJ12825 HNRNPA1 chr12 54677017 + FLJ12825 chr12 54495997 + Exonic hg19 ACC TCGA-OR-A5JA-01A 1891 CDS-5'UTR Intra-chr q13.13 q13.13 77175 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANKRD52-ATP2B3 ANKRD52 chr12 56636675 - ATP2B3 chrX 152820614 + Exonic hg19 ACC TCGA-OR-A5J7-01A 212 3'UTR-CDS Inter-chr q13.3 q28 77176 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PDXK-RRP1B PDXK chr21 45178422 + RRP1B chr21 45114773 + Exonic hg19 ACC TCGA-OR-A5J7-01A 115 3'UTR-3'UTR Intra-chr q22.3 q22.3 Seq+ 77177 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ALDOA-BCAR4 ALDOA chr16 30075825 + BCAR4 chr16 11914153 - Exonic hg19 STAD TCGA-V5-A7RE-01A5 194 5'UTR-3'UTR Intra-chr p11.2 p13.13 Seq+ 77178 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ALDOA-BCAR4 ALDOA chr16 30077247 + BCAR4 chr16 11914153 - Exonic hg19 STAD TCGA-V5-A7RE-01A5 194 5'UTR-3'UTR Intra-chr p11.2 p13.13 Seq+ 77179 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ALDOA-BCAR4 ALDOA chr16 30077247 + BCAR4 chr16 11915611 - Exonic hg19 STAD TCGA-V5-A7RE-01A5 191 5'UTR-3'UTR Intra-chr p11.2 p13.13 Seq+ 77180 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ALDOA-BCAR4 ALDOA chr16 30077956 + BCAR4 chr16 11919217 - Exonic hg19 STAD TCGA-V5-A7RE-01A5 191 5'UTR-3'UTR Intra-chr p11.2 p13.13 Seq+ 77181 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRICKLE3-PLP2 PRICKLE3 chrX 49031164 - PLP2 chrX 49031136 + Exonic hg19 STAD TCGA-V5-A7RE-01A5 129 3'UTR-3'UTR Intra-chr p11.23 p11.23 77182 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220226 - CAPN12 chr19 39220911 - Exonic hg19 STAD TCGA-V5-A7RE-01A5 273 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77183 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220638 - CAPN12 chr19 39220956 - Exonic hg19 STAD TCGA-IG-A3YC-01A8 130 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77184 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220698 - CAPN12 chr19 39221040 - Exonic hg19 STAD TCGA-LN-A8I1-01A1 178 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77185 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRDX1-MMACHC PRDX1 chr1 45976750 - MMACHC chr1 45976722 + Exonic hg19 STAD TCGA-LN-A5U5-01A3 184 3'UTR-3'UTR Intra-chr p34.1 p34.1 77186 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRDX1-MMACHC PRDX1 chr1 45976751 - MMACHC chr1 45976722 + Exonic hg19 STAD TCGA-LN-A5U5-01A3 184 3'UTR-3'UTR Intra-chr p34.1 p34.1 77187 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRDX1-MMACHC PRDX1 chr1 45976759 - MMACHC chr1 45976735 + Exonic hg19 STAD TCGA-LN-A5U5-01A3 184 3'UTR-3'UTR Intra-chr p34.1 p34.1 77188 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRDX1-MMACHC PRDX1 chr1 45976814 - MMACHC chr1 45976726 + Exonic hg19 STAD TCGA-LN-A5U5-01A3 184 3'UTR-3'UTR Intra-chr p34.1 p34.1 77189 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRDX1-MMACHC PRDX1 chr1 45976928 - MMACHC chr1 45976722 + Exonic hg19 STAD TCGA-LN-A5U5-01A3 184 3'UTR-3'UTR Intra-chr p34.1 p34.1 77190 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRDX1-MMACHC PRDX1 chr1 45976929 - MMACHC chr1 45976716 + Exonic hg19 STAD TCGA-LN-A5U5-01A3 184 3'UTR-3'UTR Intra-chr p34.1 p34.1 77191 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRDX1-MMACHC PRDX1 chr1 45976931 - MMACHC chr1 45976722 + Exonic hg19 STAD TCGA-LN-A5U5-01A3 184 3'UTR-3'UTR Intra-chr p34.1 p34.1 77192 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EIF2S1-GPHN EIF2S1 chr14 67827172 + GPHN chr14 67576856 + Exonic hg19 STAD TCGA-LN-A5U5-01A3 119 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 77193 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CAPN12-ACTN4 CAPN12 chr19 39221050 - ACTN4 chr19 39214903 + Exonic hg19 STAD TCGA-JY-A6FH-01A6 136 3'UTR-CDS Intra-chr q13.2 77194 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220638 - CAPN12 chr19 39220956 - Exonic hg19 STAD TCGA-LN-A4MR-01A6 178 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77195 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220228 - CAPN12 chr19 39220913 - Exonic hg19 STAD TCGA-2H-A9GL-01A8 163 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77196 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CAPN12-ACTN4 CAPN12 chr19 39221033 - ACTN4 chr19 39215165 + Exonic hg19 STAD TCGA-2H-A9GJ-01A7 100 3'UTR-CDS Intra-chr q13.2 77197 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANKRD30BL-PDE3A ANKRD30BL chr2 133012127 - PDE3A chr12 20704404 + Exonic hg19 STAD TCGA-L5-A4OR-01A4 204 5'UTR-5'UTR Inter-chr q21.2 p12.2 77198 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134263535 + GFAP chr17 42983728 - Exonic hg19 LGG TCGA-P5-A781-01A 112 CDS-3'UTR Inter-chr q31.1 q21.31 77199 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ADCY9-TEAD4 ADCY9 chr16 4163750 - TEAD4 chr12 3103903 + Exonic hg19 LGG TCGA-TM-A84I-01A 220 CDS-5'UTR Inter-chr p13.3 p13.33 Transcription factor Seq+ 77200 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DLG2-TSPAN9 DLG2 chr11 83235515 - TSPAN9 chr12 3192884 - Exonic hg19 LGG TCGA-TM-A84I-01A 137 CDS-5'UTR Inter-chr q14.1 p13.33 77201 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DLG2-TSPAN9 DLG2 chr11 83241483 - TSPAN9 chr12 3192884 - Exonic hg19 LGG TCGA-TM-A84I-01A 137 CDS-5'UTR Inter-chr q14.1 p13.33 77202 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CLU-GFAP CLU chr8 27455600 + GFAP chr17 42983874 - Exonic hg19 LGG TCGA-DH-A66F-01A 138 3'UTR-3'UTR Inter-chr p21.1 Tumor suppressor gene q21.31 Seq+ 77203 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EP300-BCOR EP300 chr22 41575137 + BCOR chrX 39931239 - Exonic hg19 LGG TCGA-DU-6404-02A 138 3'UTR-CDS Inter-chr q13.2 Oncogene p11.4 Oncogene Seq+ 77204 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BCOR-EP300 BCOR chrX 39931307 - EP300 chr22 41575156 + Exonic hg19 LGG TCGA-DU-6404-02A 201 CDS-3'UTR Inter-chr p11.4 Oncogene q13.2 Oncogene Seq+ 77205 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134259734 + GFAP chr17 42983717 - Exonic hg19 LGG TCGA-DU-6405-01A 100 CDS-3'UTR Inter-chr q31.1 q21.31 77206 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134263533 + GFAP chr17 42983698 - Exonic hg19 LGG TCGA-DU-6405-01A 100 CDS-3'UTR Inter-chr q31.1 q21.31 77207 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134263536 + GFAP chr17 42983727 - Exonic hg19 LGG TCGA-DU-6405-01A 100 CDS-3'UTR Inter-chr q31.1 q21.31 77208 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MAPT-HOXB6 MAPT chr17 44096095 + HOXB6 chr17 46677808 + Exonic hg19 LGG TCGA-P5-A5EV-01A 391 5'UTR-5'UTR Intra-chr q21.32 Transcription factor 77209 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134262470 + GFAP chr17 42983845 - Exonic hg19 LGG TCGA-CS-6290-01A 125 CDS-3'UTR Inter-chr q31.1 q21.31 77210 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134263536 + GFAP chr17 42983727 - Exonic hg19 LGG TCGA-CS-6290-01A 125 CDS-3'UTR Inter-chr q31.1 q21.31 77211 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134263531 + GFAP chr17 42983855 - Exonic hg19 LGG TCGA-QH-A6X3-01A 175 CDS-3'UTR Inter-chr q31.1 q21.31 77212 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EP300-BCOR EP300 chr22 41575137 + BCOR chrX 39931239 - Exonic hg19 LGG TCGA-DU-6404-01A 233 3'UTR-CDS Inter-chr q13.2 Oncogene p11.4 Oncogene Seq+ 77213 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BCOR-EP300 BCOR chrX 39931307 - EP300 chr22 41575156 + Exonic hg19 LGG TCGA-DU-6404-01A 126 CDS-3'UTR Inter-chr p11.4 Oncogene q13.2 Oncogene Seq+ 77214 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134263535 + GFAP chr17 42983728 - Exonic hg19 LGG TCGA-HW-A5KL-01A 107 CDS-3'UTR Inter-chr q31.1 q21.31 77215 ChimerSeq Tophat-Fusion TCGA_RNA-Seq INTS7-ZNF331 INTS7 chr1 212208685 - ZNF331 chr19 54063992 - Exonic hg19 LGG TCGA-HT-A5RA-01A 119 CDS-5'UTR Inter-chr q32.3 q13.42 Transcription factor 77216 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134260347 + GFAP chr17 42983845 - Exonic hg19 LGG TCGA-P5-A72X-01A 144 CDS-3'UTR Inter-chr q31.1 q21.31 77217 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134260372 + GFAP chr17 42983716 - Exonic hg19 LGG TCGA-CS-4938-01B 289 CDS-3'UTR Inter-chr q31.1 q21.31 77218 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134262382 + GFAP chr17 42983850 - Exonic hg19 LGG TCGA-S9-A6U9-01A 224 CDS-3'UTR Inter-chr q31.1 q21.31 77219 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134263534 + GFAP chr17 42983875 - Exonic hg19 LGG TCGA-P5-A72X-01A 144 CDS-3'UTR Inter-chr q31.1 q21.31 77220 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134263535 + GFAP chr17 42983728 - Exonic hg19 LGG TCGA-S9-A6U9-01A 224 CDS-3'UTR Inter-chr q31.1 q21.31 77221 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134263859 + GFAP chr17 42983691 - Exonic hg19 LGG TCGA-P5-A72X-01A 144 CDS-3'UTR Inter-chr q31.1 q21.31 77222 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CNR2-BRF1 CNR2 chr1 24229223 + BRF1 chr14 105715319 - Exonic hg19 LGG TCGA-FG-A4MT-01A 100 5'UTR-5'UTR Inter-chr p36.11 q32.33 Tumor suppressor gene 77223 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF239-SEC31B ZNF239 chr10 44059961 - SEC31B chr10 102257446 - Exonic hg19 LGG TCGA-TM-A84J-01A 330 5'UTR-CDS Intra-chr q11.21 Transcription factor q24.31 Seq+ 77224 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF239-SEC31B ZNF239 chr10 44063346 - SEC31B chr10 102257036 - Exonic hg19 LGG TCGA-TM-A84J-01A 344 5'UTR-CDS Intra-chr q11.21 Transcription factor q24.31 Seq+ 77225 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SYN3-PPP6R2 SYN3 chr22 32937084 - PPP6R2 chr22 50810578 - Exonic hg19 LGG TCGA-TM-A84J-01A 689 CDS-5'UTR Intra-chr q12.3 q13.33 77226 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SYN3-PPP6R2 SYN3 chr22 32942101 - PPP6R2 chr22 50810578 - Exonic hg19 LGG TCGA-TM-A84J-01A 666 CDS-5'UTR Intra-chr q12.3 q13.33 77227 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134262509 + GFAP chr17 42983642 - Exonic hg19 LGG TCGA-QH-A6CX-01A 197 CDS-3'UTR Inter-chr q31.1 q21.31 77228 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134263504 + GFAP chr17 42983753 - Exonic hg19 LGG TCGA-QH-A6CX-01A 197 CDS-3'UTR Inter-chr q31.1 q21.31 77229 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134263529 + GFAP chr17 42983877 - Exonic hg19 LGG TCGA-QH-A6CX-01A 197 CDS-3'UTR Inter-chr q31.1 q21.31 77230 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134263534 + GFAP chr17 42983697 - Exonic hg19 LGG TCGA-QH-A6CX-01A 197 CDS-3'UTR Inter-chr q31.1 q21.31 77231 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTPRZ1-MET PTPRZ1 chr7 121513610 + MET chr7 116335803 + Exonic hg19 LGG TCGA-DU-6407-02B 647 CDS-5'UTR Intra-chr q31.32 q31.2 TK:Met Oncogene Pub Seq+ 77232 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTPRZ1-MET PTPRZ1 chr7 121513610 + MET chr7 116339124 + Exonic hg19 LGG TCGA-DU-6407-02B 647 CDS-5'UTR Intra-chr q31.32 q31.2 TK:Met Oncogene Pub Seq+ 77233 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTEN-CAP1 PTEN chr10 89624380 + CAP1 chr1 40525005 + Exonic hg19 LGG TCGA-FG-5963-02A 109 CDS-5'UTR Inter-chr q23.31 Oncogene Tumor suppressor gene p34.2 77234 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTEN-CAP1 PTEN chr10 89624380 + CAP1 chr1 40525008 + Exonic hg19 LGG TCGA-FG-5963-02A 109 CDS-5'UTR Inter-chr q23.31 Oncogene Tumor suppressor gene p34.2 77235 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134264198 + GFAP chr17 42983747 - Exonic hg19 LGG TCGA-DU-5872-01A 151 CDS-3'UTR Inter-chr q31.1 q21.31 77236 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134262985 + GFAP chr17 42984428 - Exonic hg19 LGG TCGA-S9-A6TX-01A 124 CDS-3'UTR Inter-chr q31.1 q21.31 77237 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134262990 + GFAP chr17 42983708 - Exonic hg19 LGG TCGA-S9-A6TX-01A 124 CDS-3'UTR Inter-chr q31.1 q21.31 77238 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134263535 + GFAP chr17 42983728 - Exonic hg19 LGG TCGA-WY-A858-01A 102 CDS-3'UTR Inter-chr q31.1 q21.31 77239 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NFASC-ATP2B4 NFASC chr1 204797909 + ATP2B4 chr1 203667284 + Exonic hg19 LGG TCGA-DU-A7TD-01A 635 5'UTR-CDS Intra-chr q32.1 q32.1 Seq+ 77240 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134260158 + GFAP chr17 42983654 - Exonic hg19 LGG TCGA-HW-A5KK-01A 117 CDS-3'UTR Inter-chr q31.1 q21.31 77241 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134263485 + GFAP chr17 42983708 - Exonic hg19 LGG TCGA-HT-7680-01A 149 CDS-3'UTR Inter-chr q31.1 q21.31 77242 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134263531 + GFAP chr17 42983698 - Exonic hg19 LGG TCGA-HW-A5KK-01A 117 CDS-3'UTR Inter-chr q31.1 q21.31 77243 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134263536 + GFAP chr17 42983695 - Exonic hg19 LGG TCGA-P5-A780-01A 110 CDS-3'UTR Inter-chr q31.1 q21.31 77244 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LGG TCGA-P5-A72W-01A 157 5'UTR-5'UTR Inter-chr q24.33 q13.33 77245 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134260147 + GFAP chr17 42983715 - Exonic hg19 LGG TCGA-P5-A72W-01A 106 CDS-3'UTR Inter-chr q31.1 q21.31 77246 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134260385 + GFAP chr17 42983607 - Exonic hg19 LGG TCGA-P5-A733-01A 145 CDS-3'UTR Inter-chr q31.1 q21.31 77247 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134262417 + GFAP chr17 42983854 - Exonic hg19 LGG TCGA-R8-A6MK-01A 255 CDS-3'UTR Inter-chr q31.1 q21.31 77248 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134263536 + GFAP chr17 42983727 - Exonic hg19 LGG TCGA-R8-A6MK-01A 255 CDS-3'UTR Inter-chr q31.1 q21.31 77249 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134263538 + GFAP chr17 42983848 - Exonic hg19 LGG TCGA-P5-A733-01A 145 CDS-3'UTR Inter-chr q31.1 q21.31 77250 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KCNJ10-CISD2 KCNJ10 chr1 160039811 - CISD2 chr4 103806372 + Exonic hg19 LGG TCGA-E1-5304-01A 274 5'UTR-CDS Inter-chr q23.2 q24 Seq+ 77251 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PLEKHA6-LRRN2 PLEKHA6 chr1 204320007 - LRRN2 chr1 204589345 - Exonic hg19 LGG TCGA-FG-A4MW-01A 387 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 77252 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PLEKHA6-LRRN2 PLEKHA6 chr1 204328821 - LRRN2 chr1 204589345 - Exonic hg19 LGG TCGA-FG-A4MW-01A 393 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 77253 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134260385 + GFAP chr17 42983607 - Exonic hg19 LGG TCGA-HT-A74O-01A 108 CDS-3'UTR Inter-chr q31.1 q21.31 77254 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134262395 + GFAP chr17 42983840 - Exonic hg19 LGG TCGA-HT-A74O-01A 108 CDS-3'UTR Inter-chr q31.1 q21.31 77255 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134262516 + GFAP chr17 42983717 - Exonic hg19 LGG TCGA-HT-A74O-01A 108 CDS-3'UTR Inter-chr q31.1 q21.31 77256 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134262815 + GFAP chr17 42984436 - Exonic hg19 LGG TCGA-HT-A74O-01A 108 CDS-3'UTR Inter-chr q31.1 q21.31 77257 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134263503 + GFAP chr17 42983754 - Exonic hg19 LGG TCGA-DB-A75O-01A 127 CDS-3'UTR Inter-chr q31.1 q21.31 77258 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134264194 + GFAP chr17 42983668 - Exonic hg19 LGG TCGA-HT-A74O-01A 108 CDS-3'UTR Inter-chr q31.1 q21.31 77259 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134264216 + GFAP chr17 42983728 - Exonic hg19 LGG TCGA-HT-A74O-01A 108 CDS-3'UTR Inter-chr q31.1 q21.31 77260 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF345-LGALS13 ZNF345 chr19 37342805 + LGALS13 chr19 40095817 + Exonic hg19 LGG TCGA-TM-A84B-01A 278 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.2 Seq+ 77261 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF345-LGALS13 ZNF345 chr19 37342805 + LGALS13 chr19 40097862 + Exonic hg19 LGG TCGA-TM-A84B-01A 278 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.2 Seq+ 77262 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BCOR-EP300 BCOR chrX 39931307 - EP300 chr22 41575156 + Exonic hg19 LGG TCGA-DU-6404-02B 273 CDS-3'UTR Inter-chr p11.4 Oncogene q13.2 Oncogene Seq+ 77263 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FGFR3-FBXO28 FGFR3 chr4 1809431 + FBXO28 chr1 224336031 + Exonic hg19 LGG TCGA-TM-A84B-01A 1974 3'UTR-CDS Inter-chr p16.3 TK:FGFR Oncogene q42.11 Seq+ 77264 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EP300-BCOR EP300 chr22 41575137 + BCOR chrX 39931239 - Exonic hg19 LGG TCGA-DU-6404-02B 252 3'UTR-CDS Inter-chr q13.2 Oncogene p11.4 Oncogene Seq+ 77265 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CLU-GFAP CLU chr8 27455742 - GFAP chr17 42983710 - Exonic hg19 LGG TCGA-HT-7608-01A 133 3'UTR-3'UTR Inter-chr p21.1 Tumor suppressor gene q21.31 Seq+ 77266 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ADCYAP1R1-AQP1 ADCYAP1R1 chr7 31092292 + AQP1 chr7 30961295 + Exonic hg19 LGG TCGA-TM-A84B-01A 323 5'UTR-5'UTR Intra-chr p14.3 p14.3 Seq+ 77267 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ADCYAP1R1-AQP1 ADCYAP1R1 chr7 31092292 + AQP1 chr7 30961680 + Exonic hg19 LGG TCGA-TM-A84B-01A 304 5'UTR-CDS Intra-chr p14.3 p14.3 Seq+ 77268 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GPR19-DDX47 GPR19 chr12 12837838 - DDX47 chr12 12967157 - Exonic hg19 LUAD TCGA-78-8655-01A 376 5'UTR-CDS Intra-chr p13.1 p13.1 77269 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GPR19-DDX47 GPR19 chr12 12833146 - DDX47 chr12 12967157 - Exonic hg19 LUAD TCGA-78-8655-01A 376 5'UTR-CDS Intra-chr p13.1 p13.1 77270 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GPR19-DDX47 GPR19 chr12 12821917 - DDX47 chr12 12967157 - Exonic hg19 LUAD TCGA-78-8655-01A 209 5'UTR-CDS Intra-chr p13.1 p13.1 77271 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MORF4L2-GLRA4 MORF4L2 chrX 102933426 - GLRA4 chrX 102974576 - Exonic hg19 LUAD TCGA-44-7660-01A 278 5'UTR-CDS Intra-chr q22.2 q22.2 Seq+ 77272 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MORF4L2-GLRA4 MORF4L2 chrX 102933426 - GLRA4 chrX 102974198 - Exonic hg19 LUAD TCGA-44-7660-01A 278 5'UTR-CDS Intra-chr q22.2 q22.2 Seq+ 77273 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERBB2-NEUROD2 ERBB2 chr17 37856563 + NEUROD2 chr17 37762856 - Exonic hg19 CESC TCGA-DS-A7WF-01A 617 5'UTR-5'UTR Intra-chr q12 Oncogene q12 Transcription factor Seq+ 77274 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ECT2-EGFEM1P ECT2 chr3 172474954 + EGFEM1P chr3 168031858 + Exonic hg19 CESC TCGA-EK-A2R9-01A 202 CDS-5'UTR Intra-chr q26.31 Tumor suppressor gene q26.2 Seq+ 77275 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ECT2-EGFEM1P ECT2 chr3 172476617 + EGFEM1P chr3 168027863 + Exonic hg19 CESC TCGA-EK-A2R9-01A 186 CDS-5'UTR Intra-chr q26.31 Tumor suppressor gene q26.2 Seq+ 77276 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PVT1-MYC PVT1 chr8 128806979 + MYC chr8 128750493 + Exonic hg19 CESC TCGA-LP-A5U2-01A 4082 5'UTR-CDS Intra-chr q24.21 q24.21 Oncogene Transcription factor KB Pub Seq+ 77277 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890074 - BCAR4 chr16 11914153 - Exonic hg19 CESC TCGA-C5-A1M6-01A 233 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 77278 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890074 - BCAR4 chr16 11922247 - Exonic hg19 CESC TCGA-C5-A1M6-01A 230 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 77279 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZC3H7A-BCAR4 ZC3H7A chr16 11890979 - BCAR4 chr16 11914153 - Exonic hg19 CESC TCGA-C5-A1M6-01A 232 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 77280 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PVT1-MYC PVT1 chr8 128806979 + MYC chr8 128750493 + Exonic hg19 CESC TCGA-EA-A3HQ-01A 213 5'UTR-CDS Intra-chr q24.21 q24.21 Oncogene Transcription factor KB Pub Seq+ 77281 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PVT1-MYC PVT1 chr8 128806979 + MYC chr8 128750496 + Exonic hg19 CESC TCGA-EA-A3HQ-01A 213 5'UTR-CDS Intra-chr q24.21 q24.21 Oncogene Transcription factor KB Pub Seq+ 77282 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PVT1-MYC PVT1 chr8 128808253 + MYC chr8 128750493 + Exonic hg19 CESC TCGA-EA-A3HQ-01A 213 5'UTR-CDS Intra-chr q24.21 q24.21 Oncogene Transcription factor KB Pub Seq+ 77283 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERBB2-STARD3 ERBB2 chr17 37872857 + STARD3 chr17 37809733 + Exonic hg19 CESC TCGA-Q1-A73R-01A 142 CDS-5'UTR Intra-chr q12 Oncogene q12 Seq+ 77284 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERBB2-STARD3 ERBB2 chr17 37873732 + STARD3 chr17 37809733 + Exonic hg19 CESC TCGA-Q1-A73R-01A 150 CDS-5'UTR Intra-chr q12 Oncogene q12 Seq+ 77285 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERBB2-PGAP3 ERBB2 chr17 37851433 + PGAP3 chr17 37830931 - Exonic hg19 CESC TCGA-Q1-A73R-01A 156 5'UTR-CDS Intra-chr q12 Oncogene q12 Oncogene Seq+ 77286 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZSCAN21-NFIC ZSCAN21 chr7 99647865 + NFIC chr19 3434397 - Exonic hg19 CESC TCGA-IR-A3LK-01A 125 5'UTR-CDS Inter-chr q22.1 Transcription factor p13.3 Transcription factor 77287 ChimerSeq Tophat-Fusion TCGA_RNA-Seq STK4-SDC4 STK4 chr20 43625670 + SDC4 chr20 43955760 + Exonic hg19 CESC TCGA-EA-A5O9-01A 1072 CDS-3'UTR Intra-chr q13.12 q13.12 77288 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTPN13-C4orf36 PTPN13 chr4 87656898 + C4orf36 chr4 87797595 - Exonic hg19 CESC TCGA-VS-A8QC-01A 165 CDS-3'UTR Intra-chr q21.3 Tumor suppressor gene q21.3 Seq+ 77289 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SF3A3-ATRN SF3A3 chr1 38455696 + ATRN chr20 3471505 + Exonic hg19 CESC TCGA-Q1-A5R1-01A 100 5'UTR-CDS Inter-chr p34.3 p13 77290 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF227-HNRNPUL1 ZNF227 chr19 44717396 + HNRNPUL1 chr19 41798149 + Exonic hg19 CESC TCGA-JW-A5VI-01A 716 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.2 Seq+ 77291 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF710-RPN2 ZNF710 chr15 90569860 + RPN2 chr20 35838306 - Exonic hg19 CESC TCGA-EA-A556-01A 118 5'UTR-CDS Inter-chr q26.1 Transcription factor q11.23 77292 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WIPF2-CDC6 WIPF2 chr17 38435818 + CDC6 chr17 38444341 - Exonic hg19 CESC TCGA-EK-A2RM-01A 225 3'UTR-3'UTR Intra-chr q21.2 q21.2 77293 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NUP62-TBC1D17 NUP62 chr19 50430950 - TBC1D17 chr19 50385297 + Exonic hg19 CESC TCGA-IR-A3LH-01A 118 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 77294 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PVT1-MYC PVT1 chr8 128873729 + MYC chr8 128752932 + Exonic hg19 CESC TCGA-C5-A2M1-01A 210 5'UTR-CDS Intra-chr q24.21 q24.21 Oncogene Transcription factor KB Pub Seq+ 77295 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BIRC2-TMEM123 BIRC2 chr11 102239278 + TMEM123 chr11 102272936 - Exonic hg19 CESC TCGA-DS-A0VL-01A 375 5'UTR-CDS Intra-chr q22.2 Oncogene q22.2 Seq+ 77296 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BLCA TCGA-FD-A43U-01A 137 5'UTR-5'UTR Inter-chr q24.33 q13.33 77297 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PFDN2-NIT1 PFDN2 chr1 161087741 - NIT1 chr1 161094315 - Exonic hg19 BLCA TCGA-FD-A5BZ-01A 125 CDS-3'UTR Intra-chr q23.3 q23.3 Seq+ 77298 ChimerSeq Tophat-Fusion TCGA_RNA-Seq URGCP-TUBG2 URGCP chr7 43959155 + TUBG2 chr17 40817548 + Exonic hg19 BLCA TCGA-FJ-A3Z9-01A 108 5'UTR-CDS Inter-chr p13 q21.2 77299 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EIF4G2-TEAD1 EIF4G2 chr11 10818959 - TEAD1 chr11 12846482 + Exonic hg19 BLCA TCGA-FD-A6TD-01A 154 3'UTR-CDS Intra-chr p15.4 p15.3 Transcription factor 77300 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPARG-SYN2 PPARG chr3 12330632 + SYN2 chr3 12228868 + Exonic hg19 BLCA TCGA-E7-A5KE-01A 210 5'UTR-CDS Intra-chr p25.2 Oncogene Tumor suppressor gene Transcription factor p25.2 Seq+ 77301 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPARG-SYN2 PPARG chr3 12333743 + SYN2 chr3 12228256 + Exonic hg19 BLCA TCGA-E7-A5KE-01A 210 5'UTR-CDS Intra-chr p25.2 Oncogene Tumor suppressor gene Transcription factor p25.2 Seq+ 77302 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZMIZ1-ZCCHC24 ZMIZ1 chr10 80884927 + ZCCHC24 chr10 81192313 + Exonic hg19 BLCA TCGA-FD-A3N5-01A 122 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 77303 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPL8-ARHGAP39 RPL8 chr8 146016933 - ARHGAP39 chr8 145871502 - Exonic hg19 BLCA TCGA-GV-A3QI-01A 447 CDS-5'UTR Intra-chr q24.3 q24.3 77304 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 49999668 + Exonic hg19 BLCA TCGA-DK-A1AE-01A 100 5'UTR-5'UTR Inter-chr q24.33 q13.33 77305 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ADPRHL1-TFDP1 ADPRHL1 chr13 114076289 - TFDP1 chr13 114240163 - Exonic hg19 LUAD TCGA-55-8620-01A 310 3'UTR-CDS Intra-chr q34 q34 Transcription factor Seq+ 77306 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EXT1-FAM135B EXT1 chr8 118830673 - FAM135B chr8 139409895 + Exonic hg19 LUAD TCGA-86-7955-01A 123 CDS-5'UTR Intra-chr q24.11 Oncogene Tumor suppressor gene q24.23 77307 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EXT1-FAM135B EXT1 chr8 118830673 - FAM135B chr8 139403060 + Exonic hg19 LUAD TCGA-86-7955-01A 123 CDS-5'UTR Intra-chr q24.11 Oncogene Tumor suppressor gene q24.23 77308 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NCOA3-PTGIS NCOA3 chr20 46212004 + PTGIS chr20 48158875 + Exonic hg19 LUAD TCGA-86-7711-01A 184 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.13 77309 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GNAL-MPPE1 GNAL chr18 11859342 - MPPE1 chr18 11906307 - Exonic hg19 LUAD TCGA-62-A46O-01A 100 CDS-5'UTR Intra-chr p11.21 p11.21 77310 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402501 - RPS11 chr19 50001193 + Exonic hg19 LUAD TCGA-69-8255-01A 153 5'UTR-5'UTR Inter-chr q24.33 q13.33 77311 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GATAD2B-DCAF8 GATAD2B chr1 153895208 - DCAF8 chr1 160210159 - Exonic hg19 LUAD TCGA-62-A46U-01A 141 5'UTR-CDS Intra-chr Transcription factor q23.2 Seq+ 77312 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPS11-GOLGA3 RPS11 chr19 50001213 + GOLGA3 chr12 133402521 - Exonic hg19 LUAD TCGA-49-4486-01A 100 5'UTR-5'UTR Inter-chr q13.33 q24.33 77313 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NCSTN-SPRR2G NCSTN chr1 160324079 + SPRR2G chr1 153122606 - Exonic hg19 LUAD TCGA-97-A4M3-01A 1026 CDS-5'UTR Intra-chr q23.2 q21.3 Seq+ 77314 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ATP8B5P-ZFAND6 ATP8B5P chr9 35450102 + ZFAND6 chr15 80415108 + Exonic hg19 LUAD TCGA-MP-A4TC-01A 140 5'UTR-CDS Inter-chr p13.3 q25.1 Seq+ 77315 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTPRD-MPDZ PTPRD chr9 9735126 - MPDZ chr9 13216772 + Exonic hg19 LUAD TCGA-44-7670-01A 132 5'UTR-CDS Intra-chr Oncogene Tumor suppressor gene p23 77316 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTBP1-AP3D1 PTBP1 chr19 808102 + AP3D1 chr19 2101925 - Exonic hg19 LUAD TCGA-67-6217-01A 285 CDS-3'UTR Intra-chr p13.3 p13.3 Seq+ 77317 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTBP1-AP3D1 PTBP1 chr19 806555 + AP3D1 chr19 2101398 - Exonic hg19 LUAD TCGA-67-6217-01A 285 CDS-3'UTR Intra-chr p13.3 p13.3 Seq+ 77318 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-RPS16 ACTN4 chr19 39138546 + RPS16 chr19 39924400 - Exonic hg19 LUAD TCGA-44-2662-01A 210 CDS-3'UTR Intra-chr q13.2 Seq+ 77319 ChimerSeq Tophat-Fusion TCGA_RNA-Seq C22orf34-CRELD2 C22orf34 chr22 49985817 - CRELD2 chr22 50313894 - Exonic hg19 LUAD TCGA-44-2655-01A 613 3'UTR-CDS Intra-chr q13.33 q13.33 77320 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GADD45GIP1-NFIX GADD45GIP1 chr19 13065147 - NFIX chr19 13201203 - Exonic hg19 LUAD TCGA-38-4630-01A 153 CDS-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Transcription factor 77321 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GADD45GIP1-NFIX GADD45GIP1 chr19 13065123 - NFIX chr19 13201203 - Exonic hg19 LUAD TCGA-38-4630-01A 153 CDS-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Transcription factor 77322 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TPX2-HM13 TPX2 chr20 30330449 + HM13 chr20 30102283 + Exonic hg19 LUAD TCGA-38-4630-01A 205 5'UTR-5'UTR Intra-chr q11.21 q11.21 Seq+ 77323 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RCCD1-BLM RCCD1 chr15 91498177 + BLM chr15 91328150 + Exonic hg19 LUAD TCGA-38-4630-01A 101 5'UTR-CDS Intra-chr q26.1 q26.1 Oncogene Tumor suppressor gene Seq+ 77324 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RCCD1-BLM RCCD1 chr15 91498177 + BLM chr15 91326051 + Exonic hg19 LUAD TCGA-38-4630-01A 106 5'UTR-CDS Intra-chr q26.1 q26.1 Oncogene Tumor suppressor gene Seq+ 77325 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FNDC3B-KHDRBS3 FNDC3B chr3 171758413 + KHDRBS3 chr8 136619197 + Exonic hg19 LUAD TCGA-78-7147-01A 192 5'UTR-CDS Inter-chr q26.31 q24.23 Seq+ 77326 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FNDC3B-KHDRBS3 FNDC3B chr3 171757560 + KHDRBS3 chr8 136657301 + Exonic hg19 LUAD TCGA-78-7147-01A 270 5'UTR-CDS Inter-chr q26.31 q24.23 Seq+ 77327 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FNDC3B-KHDRBS3 FNDC3B chr3 171757560 + KHDRBS3 chr8 136619197 + Exonic hg19 LUAD TCGA-78-7147-01A 192 5'UTR-CDS Inter-chr q26.31 q24.23 Seq+ 77328 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERBB3-BCAR4 ERBB3 chr12 56493812 + BCAR4 chr16 11915611 - Exonic hg19 LUAD TCGA-05-5429-01A 180 3'UTR-3'UTR Inter-chr q13.2 Oncogene p13.13 Seq+ 77329 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERBB3-BCAR4 ERBB3 chr12 56493812 + BCAR4 chr16 11914153 - Exonic hg19 LUAD TCGA-05-5429-01A 180 3'UTR-3'UTR Inter-chr q13.2 Oncogene p13.13 Seq+ 77330 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 DLBC TCGA-G8-6906-01A 160 5'UTR-5'UTR Inter-chr q24.33 q13.33 77331 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANKRD30BL-MPO ANKRD30BL chr2 133012123 - MPO chr17 56350992 - Exonic hg19 LAML TCGA-AB-3007-03A 146 5'UTR-CDS Inter-chr q21.2 q22 77332 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANKRD30BL-MPO ANKRD30BL chr2 133012591 - MPO chr17 56356985 - Exonic hg19 LAML TCGA-AB-3007-03A 146 5'UTR-CDS Inter-chr q21.2 q22 77333 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANKRD30BL-MPO ANKRD30BL chr2 133012592 - MPO chr17 56349213 - Exonic hg19 LAML TCGA-AB-3007-03A 135 5'UTR-CDS Inter-chr q21.2 q22 77334 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANKRD30BL-MPO ANKRD30BL chr2 133012753 - MPO chr17 56355478 - Exonic hg19 LAML TCGA-AB-3007-03A 146 5'UTR-CDS Inter-chr q21.2 q22 77335 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EIF3E-KHDC1 EIF3E chr8 109229566 - KHDC1 chr6 74002623 - Exonic hg19 LAML TCGA-AB-2978-03A 100 Out-of-Frame Inter-chr q23.1 q13 77336 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPS11-GOLGA3 RPS11 chr19 50000557 + GOLGA3 chr12 133402448 - Exonic hg19 LAML TCGA-AB-2999-03B 104 5'UTR-5'UTR Inter-chr q13.33 q24.33 77337 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPS11-GOLGA3 RPS11 chr19 50001213 + GOLGA3 chr12 133402521 - Exonic hg19 LAML TCGA-AB-2833-03A 100 5'UTR-5'UTR Inter-chr q13.33 q24.33 77338 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPS11-GOLGA3 RPS11 chr19 50001213 + GOLGA3 chr12 133402521 - Exonic hg19 LAML TCGA-AB-2949-03B 109 5'UTR-5'UTR Inter-chr q13.33 q24.33 77339 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPS11-GOLGA3 RPS11 chr19 50001213 + GOLGA3 chr12 133402521 - Exonic hg19 LAML TCGA-AB-2978-03A 129 5'UTR-5'UTR Inter-chr q13.33 q24.33 77340 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPS11-GOLGA3 RPS11 chr19 50001213 + GOLGA3 chr12 133402521 - Exonic hg19 LAML TCGA-AB-2978-03A 125 5'UTR-5'UTR Inter-chr q13.33 q24.33 77341 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPS11-GOLGA3 RPS11 chr19 50001213 + GOLGA3 chr12 133402521 - Exonic hg19 LAML TCGA-AB-2986-03A 231 5'UTR-5'UTR Inter-chr q13.33 q24.33 77342 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANKRD30BL-PDE3A ANKRD30BL chr2 133012085 - PDE3A chr12 20704435 - Exonic hg19 LAML TCGA-AB-2937-03A 100 5'UTR-5'UTR Inter-chr q21.2 p12.2 77343 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANKRD30BL-PDE3A ANKRD30BL chr2 133012481 - PDE3A chr12 20704440 - Exonic hg19 LAML TCGA-AB-2937-03A 100 5'UTR-5'UTR Inter-chr q21.2 p12.2 77344 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANKRD30BL-PDE3A ANKRD30BL chr2 133012512 - PDE3A chr12 20704430 - Exonic hg19 LAML TCGA-AB-2984-03A 194 5'UTR-5'UTR Inter-chr q21.2 p12.2 77345 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANKRD30BL-PDE3A ANKRD30BL chr2 133012563 - PDE3A chr12 20704432 - Exonic hg19 LAML TCGA-AB-2984-03A 194 5'UTR-5'UTR Inter-chr q21.2 p12.2 77346 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANKRD30BL-PDE3A ANKRD30BL chr2 133012574 - PDE3A chr12 20704447 - Exonic hg19 LAML TCGA-AB-2984-03A 194 5'UTR-5'UTR Inter-chr q21.2 p12.2 77347 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANKRD30BL-PDE3A ANKRD30BL chr2 133012599 - PDE3A chr12 20704492 - Exonic hg19 LAML TCGA-AB-2987-03A 120 5'UTR-5'UTR Inter-chr q21.2 p12.2 77348 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KHDC1-EIF3E KHDC1 chr6 74002839 + EIF3E chr8 109226937 - Exonic hg19 LAML TCGA-AB-2803-03A 118 In-Frame Inter-chr q13 q23.1 77349 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-CD74 HFM1 chr1 91852850 - CD74 chr5 149781669 - Exonic hg19 LAML TCGA-AB-2985-03A 152 CDS-3'UTR Inter-chr p22.2 q33.1 77350 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-CD74 HFM1 chr1 91852941 - CD74 chr5 149781564 - Exonic hg19 LAML TCGA-AB-2985-03A 160 CDS-3'UTR Inter-chr p22.2 q33.1 77351 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-CD74 HFM1 chr1 91852978 - CD74 chr5 149781701 - Exonic hg19 LAML TCGA-AB-2985-03A 152 CDS-3'UTR Inter-chr p22.2 q33.1 77352 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-CD74 HFM1 chr1 91852978 - CD74 chr5 149781701 - Exonic hg19 LAML TCGA-AB-2985-03A 160 CDS-3'UTR Inter-chr p22.2 q33.1 77353 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TAF10-ILK TAF10 chr11 6632106 - ILK chr11 6632072 + Exonic hg19 LAML TCGA-AB-2986-03A 206 3'UTR-3'UTR Intra-chr p15.4 p15.4 TKL:MLK Tumor suppressor gene 77354 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 ACC TCGA-OR-A5JF-01A 51 5'UTR-5'UTR Inter-chr q24.33 q13.33 77355 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DLK1-RPS11 DLK1 chr14 101200728 + RPS11 chr19 50001254 + Exonic hg19 ACC TCGA-OR-A5LC-01A 3 CDS-5'UTR Inter-chr q32.2 Tumor suppressor gene q13.33 77356 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 ACC TCGA-PK-A5HB-01A 51 5'UTR-5'UTR Inter-chr q24.33 q13.33 77357 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 ACC TCGA-OR-A5J8-01A 63 5'UTR-5'UTR Inter-chr q24.33 q13.33 77358 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 ACC TCGA-OR-A5JQ-01A 58 5'UTR-5'UTR Inter-chr q24.33 q13.33 77359 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 ACC TCGA-OR-A5JS-01A 46 5'UTR-5'UTR Inter-chr q24.33 q13.33 77360 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 ACC TCGA-OR-A5LM-01A 58 5'UTR-5'UTR Inter-chr q24.33 q13.33 77361 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 ACC TCGA-OR-A5JB-01A 90 5'UTR-5'UTR Inter-chr q24.33 q13.33 77362 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 ACC TCGA-OR-A5KV-01A 90 5'UTR-5'UTR Inter-chr q24.33 q13.33 77363 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 ACC TCGA-OR-A5KY-01A 98 5'UTR-5'UTR Inter-chr q24.33 q13.33 77364 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 CHOL TCGA-ZH-A8Y8-01A 13 5'UTR-5'UTR Inter-chr q24.33 q13.33 77365 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AOX1-ALB AOX1 chr2 201534333 - ALB chr4 74280832 + Exonic hg19 CHOL TCGA-W5-AA2X-11A 7 5'UTR-CDS Inter-chr q33.1 q13.3 77366 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 CHOL TCGA-W5-AA30-11A 6 5'UTR-5'UTR Inter-chr q24.33 q13.33 77367 ChimerSeq Tophat-Fusion TCGA_RNA-Seq APOB-ALB APOB chr2 21224340 - ALB chr4 74280795 + Exonic hg19 CHOL TCGA-W5-AA34-11A 33 3'UTR-CDS Inter-chr p24.1 q13.3 77368 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EVC-CRMP1 EVC chr4 5815827 - CRMP1 chr4 5829878 - Exonic hg19 CHOL TCGA-W5-AA2Q-01A 10 3'UTR-CDS Intra-chr p16.2 p16.2 77369 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ALB-TF ALB chr4 74283351 + TF chr3 133497492 + Exonic hg19 CHOL TCGA-W5-AA34-11A 17 CDS-3'UTR Inter-chr q13.3 q22.1 77370 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KNG1-ALB KNG1 chr3 186461677 + ALB chr4 74279250 + Exonic hg19 CHOL TCGA-W5-AA2X-11A 5 3'UTR-CDS Inter-chr q27.3 q13.3 77371 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 CHOL TCGA-W5-AA2W-01A 22 5'UTR-5'UTR Inter-chr q24.33 q13.33 77372 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ALB-SERPING1 ALB chr4 74280802 - SERPING1 chr11 57382101 + Exonic hg19 CHOL TCGA-W5-AA2R-11A 17 CDS-3'UTR Inter-chr q13.3 q12.1 77373 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ALB-SERPING1 ALB chr4 74280817 - SERPING1 chr11 57382085 + Exonic hg19 CHOL TCGA-ZU-A8S4-11A 11 CDS-3'UTR Inter-chr q13.3 q12.1 77374 ChimerSeq Tophat-Fusion TCGA_RNA-Seq C3-ALB C3 chr19 6677874 - ALB chr4 74283824 + Exonic hg19 CHOL TCGA-ZU-A8S4-11A 10 3'UTR-CDS Inter-chr p13.3 q13.3 77375 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AHSG-ALB AHSG chr3 186338836 - ALB chr4 74283247 + Exonic hg19 CHOL TCGA-W5-AA2R-11A 11 3'UTR-CDS Inter-chr q27.3 q13.3 77376 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380943 - TBC1D17 chr19 50381771 + Exonic hg19 STAD TCGA-VR-AA7I-01A3 8 5'UTR-CDS Intra-chr q13.33 q13.33 77377 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380955 - TBC1D17 chr19 50385614 + Exonic hg19 STAD TCGA-VR-AA7I-01A3 6 5'UTR-CDS Intra-chr q13.33 q13.33 77378 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165881 - PPP1CA chr11 67166463 - Exonic hg19 STAD TCGA-VR-AA7I-01A3 75 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77379 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 STAD TCGA-VR-AA7I-01A3 4 5'UTR-5'UTR Inter-chr q24.33 q13.33 77380 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402415 - RPS11 chr19 49999668 + Exonic hg19 STAD TCGA-Q9-A6FW-01A7 5 5'UTR-5'UTR Inter-chr q24.33 q13.33 77381 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402415 - RPS11 chr19 49999668 + Exonic hg19 STAD TCGA-V5-A7RE-01A5 18 5'UTR-5'UTR Inter-chr q24.33 q13.33 77382 ChimerSeq Tophat-Fusion TCGA_RNA-Seq THTPA-AP1G2 THTPA chr14 24028395 - AP1G2 chr14 24029467 - Exonic hg19 STAD TCGA-V5-A7RE-01A5 18 5'UTR-CDS Intra-chr q11.2 q11.2 77383 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COG1-FAM104A COG1 chr17 71204552 + FAM104A chr17 71205105 - Exonic hg19 STAD TCGA-V5-A7RE-01A5 8 CDS-3'UTR Intra-chr q25.1 q25.1 77384 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MSH6-FBXO11 MSH6 chr2 48033753 + FBXO11 chr2 48034069 - Exonic hg19 STAD TCGA-Q9-A6FW-01A7 7 CDS-3'UTR Intra-chr p16.3 Oncogene p16.3 77385 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PAK2-LOC646214 PAK2 chr3 196533536 + LOC646214 chr15 21937545 + Exonic hg19 STAD TCGA-Q9-A6FW-01A7 2 CDS-3'UTR Inter-chr q29 STE:STE20 77386 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PAK2-LOC646214 PAK2 chr3 196539721 + LOC646214 chr15 21936968 + Exonic hg19 STAD TCGA-VR-AA7I-01A3 4 CDS-3'UTR Inter-chr q29 STE:STE20 77387 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402500 - RPS11 chr19 50001203 + Exonic hg19 STAD TCGA-LN-A8I1-01A1 11 5'UTR-5'UTR Inter-chr q24.33 q13.33 77388 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380953 - TBC1D17 chr19 50385616 + Exonic hg19 STAD TCGA-L5-A4OI-01A3 6 5'UTR-CDS Intra-chr q13.33 q13.33 77389 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380963 - TBC1D17 chr19 50386040 + Exonic hg19 STAD TCGA-L5-A4OI-01A3 6 5'UTR-CDS Intra-chr q13.33 q13.33 77390 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402283 - RPS11 chr19 50000762 + Exonic hg19 STAD TCGA-LN-A5U5-01A3 13 5'UTR-5'UTR Inter-chr q24.33 q13.33 77391 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 STAD TCGA-LN-A4MR-01A6 10 5'UTR-5'UTR Inter-chr q24.33 q13.33 77392 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402415 - RPS11 chr19 49999668 + Exonic hg19 STAD TCGA-LN-A4MR-01A6 10 5'UTR-5'UTR Inter-chr q24.33 q13.33 77393 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402415 - RPS11 chr19 49999668 + Exonic hg19 STAD TCGA-LN-A5U5-01A3 13 5'UTR-5'UTR Inter-chr q24.33 q13.33 77394 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402493 - RPS11 chr19 50000742 + Exonic hg19 STAD TCGA-LN-A4MR-01A6 10 5'UTR-5'UTR Inter-chr q24.33 q13.33 77395 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402501 - RPS11 chr19 50001193 + Exonic hg19 STAD TCGA-LN-A4MR-01A6 10 5'UTR-5'UTR Inter-chr q24.33 q13.33 77396 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402504 - RPS11 chr19 50001187 + Exonic hg19 STAD TCGA-LN-A5U5-01A3 13 5'UTR-5'UTR Inter-chr q24.33 q13.33 77397 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AIMP2-EIF2AK1 AIMP2 chr7 6063342 - EIF2AK1 chr7 6064102 - Exonic hg19 STAD TCGA-LN-A5U5-01A3 27 3'UTR-3'UTR Intra-chr p22.1 Tumor suppressor gene p22.1 77398 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AIMP2-EIF2AK1 AIMP2 chr7 6062392 + EIF2AK1 chr7 6063655 - Exonic hg19 STAD TCGA-JY-A6FH-01A6 19 CDS-3'UTR Intra-chr p22.1 Tumor suppressor gene p22.1 77399 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AIMP2-EIF2AK1 AIMP2 chr7 6063282 + EIF2AK1 chr7 6064169 - Exonic hg19 STAD TCGA-JY-A6FH-01A6 19 CDS-3'UTR Intra-chr p22.1 Tumor suppressor gene p22.1 77400 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AIMP2-EIF2AK1 AIMP2 chr7 6063376 + EIF2AK1 chr7 6064098 - Exonic hg19 STAD TCGA-JY-A6FH-01A6 19 3'UTR-3'UTR Intra-chr p22.1 Tumor suppressor gene p22.1 77401 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165662 - PPP1CA chr11 67166286 - Exonic hg19 STAD TCGA-JY-A6FH-01A6 6 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77402 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165784 - PPP1CA chr11 67169267 - Exonic hg19 STAD TCGA-LN-A5U5-01A3 8 3'UTR-5'UTR Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77403 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380958 - TBC1D17 chr19 50385544 - Exonic hg19 STAD TCGA-L5-A4OI-01A3 3 5'UTR-CDS Intra-chr q13.33 q13.33 77404 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380943 - TBC1D17 chr19 50381771 + Exonic hg19 STAD TCGA-VR-A8EX-01A1 11 5'UTR-CDS Intra-chr q13.33 q13.33 77405 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380969 - TBC1D17 chr19 50385612 + Exonic hg19 STAD TCGA-LN-A9FQ-01A6 5 5'UTR-CDS Intra-chr q13.33 q13.33 77406 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AIMP2-EIF2AK1 AIMP2 chr7 6063167 - EIF2AK1 chr7 6063690 - Exonic hg19 STAD TCGA-VR-A8EX-01A1 5 CDS-3'UTR Intra-chr p22.1 Tumor suppressor gene p22.1 77407 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AIMP2-EIF2AK1 AIMP2 chr7 6063465 - EIF2AK1 chr7 6064000 - Exonic hg19 STAD TCGA-L5-A8NH-01A8 14 3'UTR-3'UTR Intra-chr p22.1 Tumor suppressor gene p22.1 77408 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AIMP2-EIF2AK1 AIMP2 chr7 6063382 + EIF2AK1 chr7 6064216 - Exonic hg19 STAD TCGA-VR-A8EX-01A1 7 3'UTR-3'UTR Intra-chr p22.1 Tumor suppressor gene p22.1 77409 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402281 - RPS11 chr19 50000765 + Exonic hg19 STAD TCGA-LN-A9FQ-01A6 5 5'UTR-5'UTR Inter-chr q24.33 q13.33 77410 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402419 - RPS11 chr19 49999664 + Exonic hg19 STAD TCGA-2H-A9GL-01A8 5 5'UTR-5'UTR Inter-chr q24.33 q13.33 77411 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402500 - RPS11 chr19 50001203 + Exonic hg19 STAD TCGA-2H-A9GL-01A8 5 5'UTR-5'UTR Inter-chr q24.33 q13.33 77412 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402500 - RPS11 chr19 50001203 + Exonic hg19 STAD TCGA-LN-A9FQ-01A6 5 5'UTR-5'UTR Inter-chr q24.33 q13.33 77413 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402504 - RPS11 chr19 50001189 + Exonic hg19 STAD TCGA-2H-A9GL-01A8 5 5'UTR-5'UTR Inter-chr q24.33 q13.33 77414 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SRSF9-GATC SRSF9 chr12 120899830 - GATC chr12 120899371 + Exonic hg19 STAD TCGA-L5-A8NH-01A8 6 CDS-5'UTR Intra-chr q24.31 q24.31 77415 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SRSF9-GATC SRSF9 chr12 120900796 - GATC chr12 120899205 + Exonic hg19 STAD TCGA-L5-A8NH-01A8 6 CDS-5'UTR Intra-chr q24.31 q24.31 77416 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165743 + PPP1CA chr11 67168368 - Exonic hg19 STAD TCGA-VR-A8EX-01A1 6 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77417 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MSH6-FBXO11 MSH6 chr2 48033753 + FBXO11 chr2 48034069 - Exonic hg19 STAD TCGA-2H-A9GL-01A8 5 CDS-3'UTR Intra-chr p16.3 Oncogene p16.3 77418 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380935 - TBC1D17 chr19 50383532 + Exonic hg19 STAD TCGA-L5-A4OM-01A4 7 5'UTR-CDS Intra-chr q13.33 q13.33 77419 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165742 - PPP1CA chr11 67166491 - Exonic hg19 STAD TCGA-L7-A6VZ-01A6 10 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77420 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165878 - PPP1CA chr11 67166550 - Exonic hg19 STAD TCGA-L7-A6VZ-01A6 10 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77421 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402281 - RPS11 chr19 50000765 + Exonic hg19 STAD TCGA-L7-A6VZ-01A6 9 5'UTR-5'UTR Inter-chr q24.33 q13.33 77422 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 49999670 + Exonic hg19 STAD TCGA-LN-A5U7-01A1 7 5'UTR-5'UTR Inter-chr q24.33 q13.33 77423 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402415 - RPS11 chr19 49999668 + Exonic hg19 STAD TCGA-L5-A4OM-01A4 6 5'UTR-5'UTR Inter-chr q24.33 q13.33 77424 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402419 - RPS11 chr19 49999664 + Exonic hg19 STAD TCGA-L7-A6VZ-01A6 9 5'UTR-5'UTR Inter-chr q24.33 q13.33 77425 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402500 - RPS11 chr19 50001203 + Exonic hg19 STAD TCGA-L5-A4OM-01A4 6 5'UTR-5'UTR Inter-chr q24.33 q13.33 77426 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402500 - RPS11 chr19 50001203 + Exonic hg19 STAD TCGA-VR-A8EQ-01A4 3 5'UTR-5'UTR Inter-chr q24.33 q13.33 77427 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COG1-FAM104A COG1 chr17 71204236 - FAM104A chr17 71205402 - Exonic hg19 STAD TCGA-LN-A5U7-01A1 7 CDS-3'UTR Intra-chr q25.1 q25.1 77428 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MSMP-RGP1 MSMP chr9 35752987 - RGP1 chr9 35752725 + Exonic hg19 STAD TCGA-L7-A6VZ-01A6 6 3'UTR-CDS Intra-chr p13.3 p13.3 77429 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MSMP-RGP1 MSMP chr9 35753027 - RGP1 chr9 35752958 + Exonic hg19 STAD TCGA-L7-A6VZ-01A6 6 3'UTR-3'UTR Intra-chr p13.3 p13.3 77430 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MSMP-RGP1 MSMP chr9 35753056 - RGP1 chr9 35751300 + Exonic hg19 STAD TCGA-L7-A6VZ-01A6 6 3'UTR-CDS Intra-chr p13.3 p13.3 77431 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KDM1A-LUZP1 KDM1A chr1 23409626 + LUZP1 chr1 23410761 - Exonic hg19 STAD TCGA-L5-A4OM-01A4 12 CDS-3'UTR Intra-chr p36.12 p36.12 77432 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MSH6-FBXO11 MSH6 chr2 48033781 + FBXO11 chr2 48034071 - Exonic hg19 STAD TCGA-L5-A4OM-01A4 6 CDS-3'UTR Intra-chr p16.3 Oncogene p16.3 77433 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380955 - TBC1D17 chr19 50385614 + Exonic hg19 STAD TCGA-V5-AASX-11A8 6 5'UTR-CDS Intra-chr q13.33 q13.33 77434 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380958 - TBC1D17 chr19 50381986 + Exonic hg19 STAD TCGA-V5-AASX-11A8 7 5'UTR-CDS Intra-chr q13.33 q13.33 77435 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380973 - TBC1D17 chr19 50385552 + Exonic hg19 STAD TCGA-V5-AASX-11A8 6 5'UTR-CDS Intra-chr q13.33 q13.33 77436 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786614 - DHPS chr19 12787966 - Exonic hg19 STAD TCGA-R6-A8WC-01A6 13 5'UTR-CDS Intra-chr p13.13 p13.13 77437 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MSH6-FBXO11 MSH6 chr2 48032766 - FBXO11 chr2 48034076 - Exonic hg19 STAD TCGA-R6-A8WC-01A6 25 CDS-3'UTR Intra-chr p16.3 Oncogene p16.3 77438 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SRSF9-GATC SRSF9 chr12 120899973 - GATC chr12 120899075 + Exonic hg19 STAD TCGA-R6-A8WC-01A6 4 CDS-5'UTR Intra-chr q24.31 q24.31 77439 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SRSF9-GATC SRSF9 chr12 120900849 - GATC chr12 120899194 + Exonic hg19 STAD TCGA-R6-A8WC-01A6 4 CDS-5'UTR Intra-chr q24.31 q24.31 77440 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165760 - PPP1CA chr11 67168283 - Exonic hg19 STAD TCGA-R6-A8WC-01A6 5 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77441 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AIMP2-EIF2AK1 AIMP2 chr7 6062777 + EIF2AK1 chr7 6064078 - Exonic hg19 STAD TCGA-V5-AASX-11A8 8 CDS-3'UTR Intra-chr p22.1 Tumor suppressor gene p22.1 77442 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AIMP2-EIF2AK1 AIMP2 chr7 6062843 + EIF2AK1 chr7 6063794 - Exonic hg19 STAD TCGA-R6-A8WC-01A6 7 CDS-3'UTR Intra-chr p22.1 Tumor suppressor gene p22.1 77443 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AIMP2-EIF2AK1 AIMP2 chr7 6063015 + EIF2AK1 chr7 6063594 - Exonic hg19 STAD TCGA-R6-A8WC-01A6 7 CDS-3'UTR Intra-chr p22.1 Tumor suppressor gene p22.1 77444 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AIMP2-EIF2AK1 AIMP2 chr7 6063019 + EIF2AK1 chr7 6063525 - Exonic hg19 STAD TCGA-R6-A8WC-01A6 7 CDS-3'UTR Intra-chr p22.1 Tumor suppressor gene p22.1 77445 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COG1-FAM104A COG1 chr17 71204428 - FAM104A chr17 71204923 - Exonic hg19 STAD TCGA-V5-AASX-11A8 6 CDS-3'UTR Intra-chr q25.1 q25.1 77446 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380950 - TBC1D17 chr19 50385614 + Exonic hg19 STAD TCGA-L5-A4OR-01A4 5 5'UTR-CDS Intra-chr q13.33 q13.33 77447 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380970 - TBC1D17 chr19 50385597 + Exonic hg19 STAD TCGA-2H-A9GJ-01A7 12 5'UTR-CDS Intra-chr q13.33 q13.33 77448 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380973 - TBC1D17 chr19 50385552 + Exonic hg19 STAD TCGA-2H-A9GJ-01A7 12 5'UTR-CDS Intra-chr q13.33 q13.33 77449 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 49999668 + Exonic hg19 STAD TCGA-2H-A9GK-01A2 5 5'UTR-5'UTR Inter-chr q24.33 q13.33 77450 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 49999668 + Exonic hg19 STAD TCGA-L5-A4OR-01A4 15 5'UTR-5'UTR Inter-chr q24.33 q13.33 77451 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 STAD TCGA-L5-A88S-01A7 5 5'UTR-5'UTR Inter-chr q24.33 q13.33 77452 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402419 - RPS11 chr19 49999664 + Exonic hg19 STAD TCGA-L5-A88S-01A7 5 5'UTR-5'UTR Inter-chr q24.33 q13.33 77453 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402500 - RPS11 chr19 50001203 + Exonic hg19 STAD TCGA-2H-A9GJ-01A7 19 5'UTR-5'UTR Inter-chr q24.33 q13.33 77454 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786619 - DHPS chr19 12788150 - Exonic hg19 STAD TCGA-2H-A9GJ-01A7 6 5'UTR-CDS Intra-chr p13.13 p13.13 77455 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MSH6-FBXO11 MSH6 chr2 48032786 - FBXO11 chr2 48034069 - Exonic hg19 STAD TCGA-L5-A4OR-01A4 5 CDS-3'UTR Intra-chr p16.3 Oncogene p16.3 77456 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AIMP2-EIF2AK1 AIMP2 chr7 6063101 - EIF2AK1 chr7 6064147 - Exonic hg19 STAD TCGA-2H-A9GK-01A2 7 CDS-3'UTR Intra-chr p22.1 Tumor suppressor gene p22.1 77457 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165798 - PPP1CA chr11 67167088 - Exonic hg19 STAD TCGA-L5-A88S-01A7 9 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77458 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PLK1-ERN2 PLK1 chr16 23700936 + ERN2 chr16 23701635 - Exonic hg19 STAD TCGA-2H-A9GK-01A2 8 CDS-3'UTR Intra-chr p12.2 Other:PLK Tumor suppressor gene p12.2 77459 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786594 + DHPS chr19 12792478 - Exonic hg19 STAD TCGA-L5-A4OR-01A4 5 5'UTR-5'UTR Intra-chr p13.13 p13.13 77460 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 STAD TCGA-JY-A93C-01A4 12 5'UTR-5'UTR Inter-chr q24.33 q13.33 77461 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402500 - RPS11 chr19 50001203 + Exonic hg19 STAD TCGA-JY-A93C-01A4 12 5'UTR-5'UTR Inter-chr q24.33 q13.33 77462 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COPS8-FAM19A1 COPS8 chr2 237994566 - FAM19A1 chr3 68194466 + Exonic hg19 STAD TCGA-LN-A9FR-01A5 2 5'UTR-CDS Inter-chr q37.3 p14.1 77463 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165659 - PPP1CA chr11 67166283 - Exonic hg19 STAD TCGA-JY-A93C-01A4 10 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77464 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COG1-FAM104A COG1 chr17 71204541 - FAM104A chr17 71204941 - Exonic hg19 STAD TCGA-V5-A7RE-11A7 6 CDS-3'UTR Intra-chr q25.1 q25.1 77465 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 STAD TCGA-V5-AASW-01A6 5 5'UTR-5'UTR Inter-chr q24.33 q13.33 77466 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402415 - RPS11 chr19 49999668 + Exonic hg19 STAD TCGA-S8-A6BW-01A7 22 5'UTR-5'UTR Inter-chr q24.33 q13.33 77467 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402502 - RPS11 chr19 50001189 + Exonic hg19 STAD TCGA-LN-A7HY-01A7 9 5'UTR-5'UTR Inter-chr q24.33 q13.33 77468 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402503 - RPS11 chr19 50001189 + Exonic hg19 STAD TCGA-LN-A7HY-01A7 9 5'UTR-5'UTR Inter-chr q24.33 q13.33 77469 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PAK2-LOC646214 PAK2 chr3 196547342 + LOC646214 chr15 21936972 + Exonic hg19 STAD TCGA-V5-AASW-01A6 2 CDS-3'UTR Inter-chr q29 STE:STE20 77470 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LGG TCGA-TM-A84I-01A 44 5'UTR-5'UTR Inter-chr q24.33 q13.33 77471 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COG1-FAM104A COG1 chr17 71204440 - FAM104A chr17 71204652 - Exonic hg19 LGG TCGA-TQ-A7RU-01A 10 CDS-3'UTR Intra-chr q25.1 q25.1 77472 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LGG TCGA-DB-A64X-01A 59 5'UTR-5'UTR Inter-chr q24.33 q13.33 77473 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LGG TCGA-DU-7010-01A 70 5'UTR-5'UTR Inter-chr q24.33 q13.33 77474 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402491 - RPS11 chr19 50000814 + Exonic hg19 LGG TCGA-DU-A7TB-01A 13 5'UTR-5'UTR Inter-chr q24.33 q13.33 77475 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402415 - RPS11 chr19 49999668 + Exonic hg19 LGG TCGA-HT-7620-01A 18 5'UTR-5'UTR Inter-chr q24.33 q13.33 77476 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402491 - RPS11 chr19 50000532 + Exonic hg19 LGG TCGA-P5-A5EV-01A 14 5'UTR-5'UTR Inter-chr q24.33 q13.33 77477 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LGG TCGA-DU-7304-01A 26 5'UTR-5'UTR Inter-chr q24.33 q13.33 77478 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LGG TCGA-HT-8104-01A 47 5'UTR-5'UTR Inter-chr q24.33 q13.33 77479 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LGG TCGA-TQ-A7RK-01A 15 5'UTR-5'UTR Inter-chr q24.33 q13.33 77480 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LGG TCGA-HW-A5KL-01A 29 5'UTR-5'UTR Inter-chr q24.33 q13.33 77481 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LGG TCGA-WY-A85D-01A 11 5'UTR-5'UTR Inter-chr q24.33 q13.33 77482 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380957 - TBC1D17 chr19 50381807 - Exonic hg19 LGG TCGA-P5-A72X-01A 20 5'UTR-CDS Intra-chr q13.33 q13.33 77483 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380973 - TBC1D17 chr19 50381792 - Exonic hg19 LGG TCGA-P5-A72X-01A 20 5'UTR-CDS Intra-chr q13.33 q13.33 77484 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402285 - RPS11 chr19 50000534 + Exonic hg19 LGG TCGA-S9-A89Z-01A 21 5'UTR-5'UTR Inter-chr q24.33 q13.33 77485 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACADVL-DLG4 ACADVL chr17 7120523 + DLG4 chr17 7111504 - Exonic hg19 LGG TCGA-DU-A6S2-01A 4 5'UTR-CDS Intra-chr p13.1 p13.1 Tumor suppressor gene 77486 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402287 - RPS11 chr19 50000534 + Exonic hg19 LGG TCGA-HT-8110-01A 64 5'UTR-5'UTR Inter-chr q24.33 q13.33 77487 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LGG TCGA-CS-4944-01A 32 5'UTR-5'UTR Inter-chr q24.33 q13.33 77488 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LGG TCGA-CS-6668-01A 43 5'UTR-5'UTR Inter-chr q24.33 q13.33 77489 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402499 - RPS11 chr19 50001192 + Exonic hg19 LGG TCGA-DH-A7UU-01A 10 5'UTR-5'UTR Inter-chr q24.33 q13.33 77490 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LGG TCGA-E1-5311-01A 43 5'UTR-5'UTR Inter-chr q24.33 q13.33 77491 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LGG TCGA-CS-4943-01A 73 5'UTR-5'UTR Inter-chr q24.33 q13.33 77492 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LGG TCGA-HT-7610-01A 17 5'UTR-5'UTR Inter-chr q24.33 q13.33 77493 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LGG TCGA-WY-A85C-01A 42 5'UTR-5'UTR Inter-chr q24.33 q13.33 77494 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LGG TCGA-DB-A4XA-01A 84 5'UTR-5'UTR Inter-chr q24.33 q13.33 77495 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LGG TCGA-S9-A6WP-01A 10 5'UTR-5'UTR Inter-chr q24.33 q13.33 77496 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LGG TCGA-TQ-A7RK-02A 23 5'UTR-5'UTR Inter-chr q24.33 q13.33 77497 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402493 - RPS11 chr19 50000534 + Exonic hg19 LGG TCGA-DB-A4XD-01A 45 5'UTR-5'UTR Inter-chr q24.33 q13.33 77498 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LGG TCGA-DU-A7T6-01A 12 5'UTR-5'UTR Inter-chr q24.33 q13.33 77499 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LGG TCGA-HT-A5RB-01A 43 5'UTR-5'UTR Inter-chr q24.33 q13.33 77500 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LGG TCGA-DU-6394-01A 20 5'UTR-5'UTR Inter-chr q24.33 q13.33 77501 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LGG TCGA-S9-A7QW-01A 16 5'UTR-5'UTR Inter-chr q24.33 q13.33 77502 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LGG TCGA-HT-A74H-01A 4 5'UTR-5'UTR Inter-chr q24.33 q13.33 77503 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380949 - TBC1D17 chr19 50381774 - Exonic hg19 LGG TCGA-F6-A8O4-01A 5 5'UTR-CDS Intra-chr q13.33 q13.33 77504 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 49999668 + Exonic hg19 LGG TCGA-DU-8161-01A 17 5'UTR-5'UTR Inter-chr q24.33 q13.33 77505 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LGG TCGA-DH-A7UR-01A 8 5'UTR-5'UTR Inter-chr q24.33 q13.33 77506 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402491 - RPS11 chr19 50000532 + Exonic hg19 LGG TCGA-DH-A7UR-01A 8 5'UTR-5'UTR Inter-chr q24.33 q13.33 77507 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LGG TCGA-E1-5318-01A 28 5'UTR-5'UTR Inter-chr q24.33 q13.33 77508 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402500 - RPS11 chr19 50001203 + Exonic hg19 LGG TCGA-HT-7680-01A 28 5'UTR-5'UTR Inter-chr q24.33 q13.33 77509 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LGG TCGA-FG-5962-01B 32 5'UTR-5'UTR Inter-chr q24.33 q13.33 77510 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LGG TCGA-TQ-A8XE-01A 15 5'UTR-5'UTR Inter-chr q24.33 q13.33 77511 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LGG TCGA-DH-5141-01A 32 5'UTR-5'UTR Inter-chr q24.33 q13.33 77512 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402422 - RPS11 chr19 50001190 + Exonic hg19 LGG TCGA-CS-4941-01A 34 5'UTR-5'UTR Inter-chr q24.33 q13.33 77513 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LGG TCGA-HT-A61B-01A 44 5'UTR-5'UTR Inter-chr q24.33 q13.33 77514 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786617 - DHPS chr19 12788153 - Exonic hg19 LGG TCGA-DB-A75O-01A 8 5'UTR-CDS Intra-chr p13.13 p13.13 77515 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LGG TCGA-DB-A64S-01A 44 5'UTR-5'UTR Inter-chr q24.33 q13.33 77516 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LGG TCGA-DU-6542-01A 30 5'UTR-5'UTR Inter-chr q24.33 q13.33 77517 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HSP90AB1-GLYATL3 HSP90AB1 chr6 44221483 + GLYATL3 chr6 49482011 - Exonic hg19 LUAD TCGA-55-6978-01A 959 3'UTR-CDS Intra-chr p21.1 Oncogene p12.3 77518 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 READ UNCID 27 5'UTR-5'UTR Inter-chr q24.33 q13.33 77519 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 READ UNCID 27 5'UTR-5'UTR Inter-chr q24.33 q13.33 77520 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 CESC TCGA-EX-A449-01A 42 5'UTR-5'UTR Inter-chr q24.33 q13.33 77521 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402503 - RPS11 chr19 50001191 + Exonic hg19 CESC TCGA-DS-A7WF-01A 43 5'UTR-5'UTR Inter-chr q24.33 q13.33 77522 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COG1-FAM104A COG1 chr17 71204433 - FAM104A chr17 71204658 - Exonic hg19 CESC TCGA-C5-A3HL-01A 14 CDS-3'UTR Intra-chr q25.1 q25.1 77523 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COG1-FAM104A COG1 chr17 71204433 - FAM104A chr17 71204651 - Exonic hg19 CESC TCGA-VS-A8EH-01A 17 CDS-3'UTR Intra-chr q25.1 q25.1 77524 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 CESC TCGA-C5-A1MP-01A 26 5'UTR-5'UTR Inter-chr q24.33 q13.33 77525 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786621 - DHPS chr19 12786881 - Exonic hg19 CESC TCGA-EK-A3GM-01A 15 5'UTR-CDS Intra-chr p13.13 p13.13 77526 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786635 - DHPS chr19 12786913 - Exonic hg19 CESC TCGA-DG-A2KH-01A 11 5'UTR-CDS Intra-chr p13.13 p13.13 77527 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 CESC TCGA-EA-A43B-01A 41 5'UTR-5'UTR Inter-chr q24.33 q13.33 77528 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 CESC TCGA-FU-A3WB-01A 41 5'UTR-5'UTR Inter-chr q24.33 q13.33 77529 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 CESC TCGA-EX-A3L1-01A 42 5'UTR-5'UTR Inter-chr q24.33 q13.33 77530 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 CESC TCGA-JW-A5VH-01A 72 5'UTR-5'UTR Inter-chr q24.33 q13.33 77531 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786620 - DHPS chr19 12786854 - Exonic hg19 CESC TCGA-EK-A3GN-01A 8 5'UTR-CDS Intra-chr p13.13 p13.13 77532 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786621 - DHPS chr19 12786852 - Exonic hg19 CESC TCGA-FU-A23K-01A 24 5'UTR-CDS Intra-chr p13.13 p13.13 77533 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 CESC TCGA-C5-A7CM-01A 13 5'UTR-5'UTR Inter-chr q24.33 q13.33 77534 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018190 + COL1A1 chr17 48261731 - Exonic hg19 CESC TCGA-C5-A1M9-01A 4 3'UTR-3'UTR Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77535 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 CESC TCGA-EA-A5ZF-01A 40 5'UTR-5'UTR Inter-chr q24.33 q13.33 77536 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786617 - DHPS chr19 12786871 - Exonic hg19 CESC TCGA-MY-A913-01A 43 5'UTR-CDS Intra-chr p13.13 p13.13 77537 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 49999668 + Exonic hg19 CESC TCGA-MA-AA3Z-01A 7 5'UTR-5'UTR Inter-chr q24.33 q13.33 77538 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 CESC TCGA-DR-A0ZL-01A 28 5'UTR-5'UTR Inter-chr q24.33 q13.33 77539 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 CESC TCGA-EA-A3HR-01A 48 5'UTR-5'UTR Inter-chr q24.33 q13.33 77540 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 CESC TCGA-DG-A2KM-01A 18 5'UTR-5'UTR Inter-chr q24.33 q13.33 77541 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 CESC TCGA-EA-A50E-01A 38 5'UTR-5'UTR Inter-chr q24.33 q13.33 77542 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CD74-SGK1 CD74 chr5 149781575 + SGK1 chr6 134493871 - Exonic hg19 CESC TCGA-DG-A2KM-01A 2 3'UTR-CDS Inter-chr q33.1 q23.2 AGC:SGK Oncogene 77543 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 CESC TCGA-C5-A1MH-01A 52 5'UTR-5'UTR Inter-chr q24.33 q13.33 77544 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786568 - DHPS chr19 12786852 - Exonic hg19 CESC TCGA-EX-A1H5-01A 22 5'UTR-CDS Intra-chr p13.13 p13.13 77545 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165879 - PPP1CA chr11 67166278 - Exonic hg19 CESC TCGA-C5-A1MH-01A 6 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77546 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402496 - RPS11 chr19 50001185 + Exonic hg19 CESC TCGA-FU-A23L-01A 38 5'UTR-5'UTR Inter-chr q24.33 q13.33 77547 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GAPDH-JUP GAPDH chr12 6647000 - JUP chr17 39911487 - Exonic hg19 CESC TCGA-FU-A5XV-01A 4 CDS-3'UTR Inter-chr p13.31 q21.2 Tumor suppressor gene 77548 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COG1-FAM104A COG1 chr17 71204433 - FAM104A chr17 71204661 - Exonic hg19 CESC TCGA-DS-A0VL-01A 10 CDS-3'UTR Intra-chr q25.1 q25.1 77549 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COG1-FAM104A COG1 chr17 71204441 - FAM104A chr17 71205538 - Exonic hg19 CESC TCGA-C5-A2M1-01A 28 CDS-3'UTR Intra-chr q25.1 q25.1 77550 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 49999668 + Exonic hg19 BLCA TCGA-BT-A42E-01A 75 5'UTR-5'UTR Inter-chr q24.33 q13.33 77551 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018421 + COL1A1 chr17 48261643 - Exonic hg19 BLCA TCGA-BT-A20U-01A 14 3'UTR-3'UTR Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77552 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402500 - RPS11 chr19 50001191 + Exonic hg19 BLCA TCGA-S5-AA26-01A 91 5'UTR-5'UTR Inter-chr q24.33 q13.33 77553 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2017779 + COL1A1 chr17 48261761 - Exonic hg19 BLCA TCGA-GC-A3YS-01A 6 3'UTR-3'UTR Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77554 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786619 - DHPS chr19 12786856 - Exonic hg19 BLCA TCGA-S5-AA26-01A 7 5'UTR-CDS Intra-chr p13.13 p13.13 77555 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BLCA TCGA-CF-A47X-01A 65 5'UTR-5'UTR Inter-chr q24.33 q13.33 77556 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BLCA TCGA-XF-A8HE-01A 25 5'UTR-5'UTR Inter-chr q24.33 q13.33 77557 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTMS-MYH9 PTMS chr12 6879739 - MYH9 chr22 36682793 - Exonic hg19 BLCA TCGA-BT-A2LB-01A 3 3'UTR-CDS Inter-chr p13.31 q12.3 Oncogene Tumor suppressor gene 77558 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018420 + COL1A1 chr17 48261722 - Exonic hg19 BLCA TCGA-XF-A8HH-01A 7 3'UTR-3'UTR Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77559 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786594 - DHPS chr19 12786873 - Exonic hg19 BLCA TCGA-CF-A47V-01A 32 5'UTR-CDS Intra-chr p13.13 p13.13 77560 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUAD TCGA-35-4122-01A 103 5'UTR-5'UTR Inter-chr q24.33 q13.33 77561 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC14A2-ABHD3 SLC14A2 chr18 42793155 + ABHD3 chr18 19244190 - Exonic hg19 LUAD TCGA-44-7667-01A 142 5'UTR-CDS Intra-chr q12.3 q11.2 Seq+ 77562 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC14A2-ABHD3 SLC14A2 chr18 42793155 + ABHD3 chr18 19239303 - Exonic hg19 LUAD TCGA-44-7667-01A 142 5'UTR-CDS Intra-chr q12.3 q11.2 Seq+ 77563 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402285 - RPS11 chr19 50000534 + Exonic hg19 DLBC TCGA-GR-A4D5-01A 49 5'UTR-5'UTR Inter-chr q24.33 q13.33 77564 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165672 - PPP1CA chr11 67166107 - Exonic hg19 DLBC TCGA-FA-8693-01A 30 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77565 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TRIM27-PTPRR TRIM27 chr6 28879472 - PTPRR chr12 71050596 - Exonic hg19 SARC TCGA-DX-A23Z-01A 119 5'UTR-CDS Inter-chr q15 Seq+ 77566 ChimerSeq Tophat-Fusion TCGA_RNA-Seq VSNL1-LAPTM4A VSNL1 chr2 17768825 + LAPTM4A chr2 20251170 + Exonic hg19 SARC TCGA-DX-A3LY-01B 307 5'UTR-CDS Intra-chr p24.2 Tumor suppressor gene p24.1 77567 ChimerSeq Tophat-Fusion TCGA_RNA-Seq VSNL1-LAPTM4A VSNL1 chr2 17768918 + LAPTM4A chr2 20251170 + Exonic hg19 SARC TCGA-DX-A3LY-01B 307 5'UTR-CDS Intra-chr p24.2 Tumor suppressor gene p24.1 77568 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KRT79-CDK4 KRT79 chr12 53223028 - CDK4 chr12 58142183 + Exonic hg19 SARC TCGA-DX-A3LY-01B 1470 CDS-3'UTR Intra-chr q13.13 q14.1 CMGC:CDK Oncogene 77569 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FRS2-RFWD2 FRS2 chr12 69864309 + RFWD2 chr1 175996818 - Exonic hg19 SARC TCGA-DX-A6BH-01A 172 5'UTR-CDS Inter-chr q15 q25.2 Tumor suppressor gene Seq+ 77570 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FRS2-RFWD2 FRS2 chr12 69864309 + RFWD2 chr1 175996823 - Exonic hg19 SARC TCGA-DX-A6BH-01A 172 5'UTR-CDS Inter-chr q15 q25.2 Tumor suppressor gene Seq+ 77571 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CBX5-SRGAP1 CBX5 chr12 54667396 - SRGAP1 chr12 64437354 - Exonic hg19 SARC TCGA-DX-A3LY-01B 340 5'UTR-CDS Intra-chr q13.13 Tumor suppressor gene q14.2 77572 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ATXN1-SLC24A1 ATXN1 chr6 16486202 - SLC24A1 chr15 65911217 + Exonic hg19 SARC TCGA-DX-A1L3-01A 120 5'UTR-5'UTR Inter-chr p22.3 q22.31 Seq+ 77573 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ATXN1-SLC24A1 ATXN1 chr6 16486202 - SLC24A1 chr15 65916292 + Exonic hg19 SARC TCGA-DX-A1L3-01A 120 5'UTR-5'UTR Inter-chr p22.3 q22.31 Seq+ 77574 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PLEKHA5-CPM PLEKHA5 chr12 19475600 + CPM chr12 69351046 - Exonic hg19 SARC TCGA-DX-A1L3-01A 309 CDS-5'UTR Intra-chr p12.3 q15 Seq+ 77575 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PLEKHA5-CPM PLEKHA5 chr12 19475600 + CPM chr12 69351457 - Exonic hg19 SARC TCGA-DX-A1L3-01A 309 CDS-5'UTR Intra-chr p12.3 q15 Seq+ 77576 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FRS2-ATXN1 FRS2 chr12 69864309 + ATXN1 chr6 16522918 - Exonic hg19 SARC TCGA-DX-A1L3-01A 102 5'UTR-5'UTR Inter-chr q15 p22.3 Seq+ 77577 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OS9-COL1A1 OS9 chr12 58112158 - COL1A1 chr17 48261656 - Exonic hg19 SARC TCGA-DX-A1L3-01A 100 CDS-3'UTR Inter-chr q13.3 q21.33 Oncogene 77578 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NAPA-PLAC1 NAPA chr19 48018099 - PLAC1 chrX 133700769 - Exonic hg19 SARC TCGA-IE-A4EH-01A 148 Inter-chr q13.33 q26.3 Seq+ 77579 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BCRP2-MYH9 BCRP2 chr22 21464096 + MYH9 chr22 36707251 + Exonic hg19 SARC TCGA-DX-A6YQ-01A 486 5'UTR-CDS Intra-chr q11.21 q12.3 Oncogene Tumor suppressor gene 77580 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PNMA2-HMBOX1 PNMA2 chr8 26362820 - HMBOX1 chr8 28876427 - Exonic hg19 SARC TCGA-DX-A1L0-01A 179 3'UTR-CDS Intra-chr p21.2 p21.1 Transcription factor 77581 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC16A7-NUP107 SLC16A7 chr12 59990016 + NUP107 chr12 69127231 + Exonic hg19 SARC TCGA-DX-A1L0-01A 348 5'UTR-CDS Intra-chr q14.1 q15 Seq+ 77582 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LATS2-MYLK LATS2 chr13 21634332 - MYLK chr3 123386033 - Exonic hg19 SARC TCGA-K1-A42X-02A 147 5'UTR-5'UTR Inter-chr q12.11 AGC:NDR Tumor suppressor gene q21.1 Seq+ 77583 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLFN5-TBC1D15 SLFN5 chr17 33570161 + TBC1D15 chr12 72307605 + Exonic hg19 SARC TCGA-DX-A1L0-01A 161 5'UTR-5'UTR Inter-chr q12 q21.1 Seq+ 77584 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 UCEC TCGA-AJ-A3BK-01A 159 5'UTR-5'UTR Inter-chr q24.33 q13.33 77585 ChimerSeq Tophat-Fusion TCGA_RNA-Seq THAP3-LOC100129138 THAP3 chr1 6692554 + LOC100129138 chr1 104615994 + Exonic hg19 UCEC TCGA-EO-A3AY-01A 116 CDS-5'UTR Intra-chr p36.31 Transcription factor 77586 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GPS1-RFNG GPS1 chr17 80015000 + RFNG chr17 80006113 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 365 CDS-3'UTR Intra-chr q25.3 q25.3 Seq+ 77587 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MAPKAPK2-PLA2G2A MAPKAPK2 chr1 206858852 + PLA2G2A chr1 20305371 - Exonic hg19 UCEC TCGA-EO-A1Y7-01A 126 CDS-5'UTR Intra-chr q32.1 CAMK:MAPKAPK p36.13 Tumor suppressor gene Seq+ 77588 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GAS2L3-PIGA GAS2L3 chr12 100973740 + PIGA chrX 15339833 - Exonic hg19 UCEC TCGA-BK-A139-01A 117 5'UTR-CDS Inter-chr q23.1 p22.2 77589 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZFAND3-FYN ZFAND3 chr6 38084514 + FYN chr6 112138769 + Exonic hg19 UCEC TCGA-AJ-A3NH-01A 114 CDS-5'UTR Intra-chr p21.2 q21 TK:Src 77590 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SPOP-NDUFS5 SPOP chr17 47755294 - NDUFS5 chr1 39494394 + Exonic hg19 UCEC TCGA-EY-A4KR-01A 158 5'UTR-5'UTR Inter-chr q21.33 Oncogene Tumor suppressor gene p34.3 Seq+ 77591 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AAK1-ANXA4 AAK1 chr2 69843321 - ANXA4 chr2 70047952 - Exonic hg19 UCEC TCGA-AJ-A6NU-01A 132 CDS-5'UTR Intra-chr p13.3 Other:NAK p13.3 77592 ChimerSeq Tophat-Fusion TCGA_RNA-Seq YY1AP1-CDK18 YY1AP1 chr1 155644800 - CDK18 chr1 205475990 - Exonic hg19 UCEC TCGA-KP-A3W3-01A 225 CDS-5'UTR Intra-chr q22 q32.1 77593 ChimerSeq Tophat-Fusion TCGA_RNA-Seq G3BP1-LMNB1 G3BP1 chr5 151151596 + LMNB1 chr5 126140467 + Exonic hg19 UCEC TCGA-AX-A3GI-01A 100 5'UTR-5'UTR Intra-chr q33.1 q23.2 Seq+ 77594 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRRC2C-FMO3 PRRC2C chr1 171454873 + FMO3 chr1 171070220 + Exonic hg19 UCEC TCGA-BK-A139-02A 140 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 77595 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TIMM17B-PQBP1 TIMM17B chrX 48755272 - PQBP1 chrX 48758510 - Exonic hg19 UCEC TCGA-BK-A139-02A 110 5'UTR-CDS Intra-chr p11.23 p11.23 Seq+ 77596 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF738-GRAMD1A ZNF738 chr19 21541886 + GRAMD1A chr19 35505290 - Exonic hg19 UCEC TCGA-B5-A5OE-01A 120 5'UTR-CDS Intra-chr p12 q13.11 77597 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HMBOX1-PNOC HMBOX1 chr8 28748192 + PNOC chr8 28186649 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 109 5'UTR-5'UTR Intra-chr p21.1 Transcription factor p21.1 Seq+ 77598 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MARCKSL1-NT5C2 MARCKSL1 chr1 32799472 + NT5C2 chr10 104936235 - Exonic hg19 UCEC TCGA-AP-A3K1-01A 114 3'UTR-5'UTR Inter-chr p35.1 q24.33 77599 ChimerSeq Tophat-Fusion TCGA_RNA-Seq STX5-PPP1R14B STX5 chr11 62591688 - PPP1R14B chr11 64011966 - Exonic hg19 UCEC TCGA-AJ-A3TW-01A 438 CDS-3'UTR Intra-chr q12.3 q13.1 Seq+ 77600 ChimerSeq Tophat-Fusion TCGA_RNA-Seq YAP1-BIRC2 YAP1 chr11 101985124 + BIRC2 chr11 102233626 + Exonic hg19 UCEC TCGA-KP-A3VZ-01A 103 CDS-5'UTR Intra-chr q22.1 Tumor suppressor gene q22.2 Oncogene Seq+ 77601 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZFP30-YIF1B ZFP30 chr19 38134165 - YIF1B chr19 38795014 + Exonic hg19 UCEC TCGA-AJ-A3BD-01A 161 CDS-3'UTR Intra-chr q13.12 Transcription factor q13.2 77602 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TPX2-HM13 TPX2 chr20 30330449 + HM13 chr20 30102283 + Exonic hg19 UCEC TCGA-EY-A3QX-01A 299 5'UTR-5'UTR Intra-chr q11.21 q11.21 Seq+ 77603 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERBB2-PVT1 ERBB2 chr17 37876086 + PVT1 chr8 129043188 + Exonic hg19 UCEC TCGA-EY-A3QX-01A 134 CDS-5'UTR Inter-chr q12 Oncogene q24.21 Seq+ 77604 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERBB2-PVT1 ERBB2 chr17 37876086 + PVT1 chr8 129043282 + Exonic hg19 UCEC TCGA-EY-A3QX-01A 134 CDS-5'UTR Inter-chr q12 Oncogene q24.21 Seq+ 77605 ChimerSeq Tophat-Fusion TCGA_RNA-Seq STARD3-GRB7 STARD3 chr17 37793483 + GRB7 chr17 37898504 + Exonic hg19 UCEC TCGA-EY-A3QX-01A 111 5'UTR-5'UTR Intra-chr q12 q12 Seq+ 77606 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MYO9A-PARP6 MYO9A chr15 72410020 - PARP6 chr15 72535039 - Exonic hg19 UCEC TCGA-AX-A3G4-01A 153 5'UTR-CDS Intra-chr q23 q23 Seq+ 77607 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LRIG1-FAM19A4 LRIG1 chr3 66461311 - FAM19A4 chr3 68964730 + Exonic hg19 UCEC TCGA-FI-A3PX-01A 518 CDS-5'UTR Intra-chr Tumor suppressor gene p14.1 77608 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LRIG1-FAM19A4 LRIG1 chr3 66463294 - FAM19A4 chr3 68969835 + Exonic hg19 UCEC TCGA-FI-A3PX-01A 520 CDS-5'UTR Intra-chr Tumor suppressor gene p14.1 77609 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RHOBTB1-ARID5B RHOBTB1 chr10 62732871 - ARID5B chr10 63817076 - Exonic hg19 UCEC TCGA-A5-A1OH-01A 381 5'UTR-CDS Intra-chr q21.2 q21.2 Transcription factor 77610 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TPX2-HM13 TPX2 chr20 30330449 + HM13 chr20 30154012 + Exonic hg19 UCEC TCGA-B5-A3FH-01A 131 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 77611 ChimerSeq Tophat-Fusion TCGA_RNA-Seq C11orf85-DPF2 C11orf85 chr11 64726950 - DPF2 chr11 65113829 - Exonic hg19 UCEC TCGA-D1-A3DH-01A 290 5'UTR-CDS Intra-chr q13.1 77612 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TALDO1-ZDHHC15 TALDO1 chr11 764899 + ZDHHC15 chrX 74620868 + Exonic hg19 UCEC TCGA-DF-A2L0-01A 144 3'UTR-3'UTR Inter-chr p15.5 q13.3 77613 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NAP1L4-CD58 NAP1L4 chr11 2966506 - CD58 chr1 117075239 - Exonic hg19 UCEC TCGA-AJ-A3EL-01A 140 Inter-chr p13.1 77614 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FAM32A-CECR1 FAM32A chr19 16296235 - CECR1 chr22 17694475 - Exonic hg19 UCEC TCGA-AJ-A3EL-01A 120 5'UTR-5'UTR Inter-chr p13.11 77615 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CDKN1A-ERAS CDKN1A chr6 36646574 + ERAS chrX 48687490 + Exonic hg19 UCEC TCGA-B5-A3FB-01A 3021 5'UTR-5'UTR Inter-chr p21.2 Tumor suppressor gene p11.23 Seq+ 77616 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RSPRY1-MT4 RSPRY1 chr16 57220362 + MT4 chr16 56599004 + Exonic hg19 UCEC TCGA-AJ-A3I9-01A 680 5'UTR-5'UTR Intra-chr q13 q13 Seq+ 77617 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SART3-DAO SART3 chr12 108938914 - DAO chr12 109278773 + Exonic hg19 UCEC TCGA-BG-A3PP-01A 142 CDS-5'UTR Intra-chr q23.3 q24.11 Seq+ 77618 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39214925 - CAPN12 chr19 39220888 - Exonic hg19 OV TCGA-09-0367-01A 160 CDS-3'UTR Intra-chr q13.2 Seq+ 77619 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220117 - CAPN12 chr19 39220934 - Exonic hg19 OV TCGA-20-1685-01A 153 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77620 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220118 - CAPN12 chr19 39220935 - Exonic hg19 OV TCGA-61-2092-01A 129 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77621 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220121 - CAPN12 chr19 39220983 - Exonic hg19 OV TCGA-24-1471-01A 187 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77622 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220125 - CAPN12 chr19 39220933 - Exonic hg19 OV TCGA-24-1471-01A 187 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77623 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220210 - CAPN12 chr19 39221128 - Exonic hg19 OV TCGA-09-0369-01A 170 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77624 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220221 - CAPN12 chr19 39220908 - Exonic hg19 OV TCGA-10-0933-01A 159 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77625 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220223 - CAPN12 chr19 39220908 - Exonic hg19 OV TCGA-23-1023-01R 297 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77626 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220223 - CAPN12 chr19 39220908 - Exonic hg19 OV TCGA-24-1471-01A 187 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77627 ChimerSeq Tophat-Fusion TCGA_RNA-Seq P2RY11-EIF3G P2RY11 chr19 10225703 - EIF3G chr19 10229631 - Exonic hg19 OV TCGA-20-1685-01A 109 3'UTR-CDS Intra-chr p13.2 p13.2 77628 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FLJ23867-QSOX1 FLJ23867 chr1 180168200 + QSOX1 chr1 180165705 + Exonic hg19 OV TCGA-09-0369-01A 109 5'UTR-CDS Intra-chr q25.2 77629 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPS11-GOLGA3 RPS11 chr19 50001211 + GOLGA3 chr12 133402514 - Exonic hg19 OV TCGA-09-0367-01A 107 5'UTR-5'UTR Inter-chr q13.33 q24.33 77630 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPS11-GOLGA3 RPS11 chr19 50001213 + GOLGA3 chr12 133402521 - Exonic hg19 OV TCGA-09-0367-01A 107 5'UTR-5'UTR Inter-chr q13.33 q24.33 77631 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPS11-GOLGA3 RPS11 chr19 50001225 + GOLGA3 chr12 133402648 - Exonic hg19 OV TCGA-09-0367-01A 107 5'UTR-5'UTR Inter-chr q13.33 q24.33 77632 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HCFC1R1-THOC6 HCFC1R1 chr16 3074094 - THOC6 chr16 3074304 + Exonic hg19 OV TCGA-10-0926-01A 220 5'UTR-5'UTR Intra-chr p13.3 p13.3 77633 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MACROD2-KIF16B MACROD2 chr20 16030679 + KIF16B chr20 16506736 + Exonic hg19 OV TCGA-24-1550-01A 106 3'UTR-CDS Intra-chr p12.1 p12.1 77634 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RHOA-DAG1 RHOA chr3 49412866 - DAG1 chr3 49572175 - Exonic hg19 OV TCGA-23-1024-01A 245 CDS-3'UTR Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 77635 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39214924 - CAPN12 chr19 39220887 - Exonic hg19 OV TCGA-61-1741-01A 129 CDS-3'UTR Intra-chr q13.2 Seq+ 77636 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39216508 - CAPN12 chr19 39220921 - Exonic hg19 OV TCGA-23-1024-01A 166 CDS-3'UTR Intra-chr q13.2 Seq+ 77637 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39219963 - CAPN12 chr19 39220936 - Exonic hg19 OV TCGA-61-1741-01A 128 CDS-3'UTR Intra-chr q13.2 Seq+ 77638 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220090 - CAPN12 chr19 39220890 - Exonic hg19 OV TCGA-61-1741-01A 128 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77639 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220117 - CAPN12 chr19 39220934 - Exonic hg19 OV TCGA-61-1743-01A 220 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77640 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220118 - CAPN12 chr19 39220935 - Exonic hg19 OV TCGA-09-2044-01B 189 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77641 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220118 - CAPN12 chr19 39220935 - Exonic hg19 OV TCGA-24-1464-01A 111 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77642 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220118 - CAPN12 chr19 39220952 - Exonic hg19 OV TCGA-61-1741-01A 128 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77643 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220119 - CAPN12 chr19 39220936 - Exonic hg19 OV TCGA-61-1741-01A 128 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77644 ChimerSeq Tophat-Fusion TCGA_RNA-Seq P2RY11-EIF3G P2RY11 chr19 10225703 - EIF3G chr19 10229631 - Exonic hg19 OV TCGA-13-1410-01A 105 3'UTR-CDS Intra-chr p13.2 p13.2 77645 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PLP2-PRICKLE3 PLP2 chrX 49031134 + PRICKLE3 chrX 49031392 - Exonic hg19 OV TCGA-13-1410-01A 104 3'UTR-3'UTR Intra-chr p11.23 p11.23 77646 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRDX1-MMACHC PRDX1 chr1 45976750 - MMACHC chr1 45976722 + Exonic hg19 OV TCGA-10-0931-01A 108 3'UTR-3'UTR Intra-chr p34.1 p34.1 77647 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRDX1-MMACHC PRDX1 chr1 45976751 - MMACHC chr1 45976722 + Exonic hg19 OV TCGA-10-0931-01A 108 3'UTR-3'UTR Intra-chr p34.1 p34.1 77648 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRDX1-MMACHC PRDX1 chr1 45976814 - MMACHC chr1 45976726 + Exonic hg19 OV TCGA-10-0931-01A 108 3'UTR-3'UTR Intra-chr p34.1 p34.1 77649 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRDX1-MMACHC PRDX1 chr1 45976929 - MMACHC chr1 45976722 + Exonic hg19 OV TCGA-10-0931-01A 108 3'UTR-3'UTR Intra-chr p34.1 p34.1 77650 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRDX1-MMACHC PRDX1 chr1 45976931 - MMACHC chr1 45976722 + Exonic hg19 OV TCGA-10-0931-01A 108 3'UTR-3'UTR Intra-chr p34.1 p34.1 77651 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FLJ23867-QSOX1 FLJ23867 chr1 180167253 + QSOX1 chr1 180166692 + Exonic hg19 OV TCGA-04-1651-01A 101 5'UTR-3'UTR Intra-chr q25.2 77652 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FLJ23867-QSOX1 FLJ23867 chr1 180169133 + QSOX1 chr1 180166560 + Exonic hg19 OV TCGA-04-1651-01A 101 5'UTR-3'UTR Intra-chr q25.2 77653 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39214924 - CAPN12 chr19 39220887 - Exonic hg19 OV TCGA-36-1580-01A 101 CDS-3'UTR Intra-chr q13.2 Seq+ 77654 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39219950 - CAPN12 chr19 39221060 - Exonic hg19 OV TCGA-36-1580-01A 100 CDS-3'UTR Intra-chr q13.2 Seq+ 77655 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220084 - CAPN12 chr19 39220943 - Exonic hg19 OV TCGA-59-2351-01A 130 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77656 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220118 - CAPN12 chr19 39220935 - Exonic hg19 OV TCGA-59-2351-01A 130 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77657 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220212 - CAPN12 chr19 39221131 - Exonic hg19 OV TCGA-36-1580-01A 100 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77658 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220568 - CAPN12 chr19 39220904 - Exonic hg19 OV TCGA-29-1698-01A 239 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77659 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPS11-GOLGA3 RPS11 chr19 50001211 + GOLGA3 chr12 133402514 - Exonic hg19 OV TCGA-10-0931-01A 104 5'UTR-5'UTR Inter-chr q13.33 q24.33 77660 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPS11-GOLGA3 RPS11 chr19 50001213 + GOLGA3 chr12 133402521 - Exonic hg19 OV TCGA-10-0931-01A 104 5'UTR-5'UTR Inter-chr q13.33 q24.33 77661 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPS11-GOLGA3 RPS11 chr19 50001225 + GOLGA3 chr12 133402648 - Exonic hg19 OV TCGA-10-0931-01A 104 5'UTR-5'UTR Inter-chr q13.33 q24.33 77662 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSPAN18-TP53I11 TSPAN18 chr11 44953914 - TP53I11 chr11 44955951 - Exonic hg19 OV TCGA-29-1691-01A 116 3'UTR-3'UTR Intra-chr p11.2 p11.2 77663 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FLJ23867-QSOX1 FLJ23867 chr1 180167966 + QSOX1 chr1 180165672 + Exonic hg19 OV TCGA-59-2348-01A 173 5'UTR-CDS Intra-chr q25.2 77664 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39214927 - CAPN12 chr19 39220890 - Exonic hg19 OV TCGA-13-1492-01A 215 CDS-3'UTR Intra-chr q13.2 Seq+ 77665 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39219961 - CAPN12 chr19 39220934 - Exonic hg19 OV TCGA-13-1492-01A 208 CDS-3'UTR Intra-chr q13.2 Seq+ 77666 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220117 - CAPN12 chr19 39220934 - Exonic hg19 OV TCGA-59-2348-01A 110 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77667 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220118 - CAPN12 chr19 39220935 - Exonic hg19 OV TCGA-13-1492-01A 208 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77668 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220126 - CAPN12 chr19 39220934 - Exonic hg19 OV TCGA-59-2348-01A 110 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77669 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220558 - CAPN12 chr19 39221124 - Exonic hg19 OV TCGA-10-0927-01A 200 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77670 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220606 - CAPN12 chr19 39220995 - Exonic hg19 OV TCGA-20-1686-01A 153 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77671 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPL27A-ST5 RPL27A chr11 8710416 - ST5 chr11 8719182 - Exonic hg19 OV TCGA-59-2348-01A 113 3'UTR-CDS Intra-chr p15.4 p15.4 Tumor suppressor gene Seq+ 77672 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC29A4-ACTB SLC29A4 chr7 5329359 + ACTB chr7 5567683 + Exonic hg19 OV TCGA-13-1496-01A 230 CDS-3'UTR Intra-chr p22.1 p22.1 77673 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39217667 - CAPN12 chr19 39220940 - Exonic hg19 OV TCGA-24-2023-01A 112 CDS-3'UTR Intra-chr q13.2 Seq+ 77674 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220085 - CAPN12 chr19 39220963 - Exonic hg19 OV TCGA-29-1696-01A 219 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77675 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220086 - CAPN12 chr19 39220945 - Exonic hg19 OV TCGA-24-2290-01A 136 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77676 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220118 - CAPN12 chr19 39220935 - Exonic hg19 OV TCGA-24-1103-01A 172 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77677 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-CAPN12 ACTN4 chr19 39220118 - CAPN12 chr19 39220935 - Exonic hg19 OV TCGA-24-2290-01A 136 3'UTR-3'UTR Intra-chr q13.2 Seq+ 77678 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SND1-CD2BP2 SND1 chr7 127498004 - CD2BP2 chr16 30363909 - Exonic hg19 UVM TCGA-V4-A9E9-01A 141 CDS-3'UTR Inter-chr q32.1 p11.2 77679 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GTF2H5-QKI GTF2H5 chr6 158591569 + QKI chr6 163998806 - Exonic hg19 UVM TCGA-VD-A8KJ-01A 278 CDS-3'UTR Intra-chr q25.3 q26 77680 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CAB39-HDLBP CAB39 chr2 231660813 + HDLBP chr2 242254516 + Exonic hg19 UVM TCGA-V4-A9EK-01A 140 CDS-5'UTR Intra-chr q37.1 q37.3 77681 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CAB39-HDLBP CAB39 chr2 231660813 + HDLBP chr2 242254984 + Exonic hg19 UVM TCGA-V4-A9EK-01A 140 CDS-5'UTR Intra-chr q37.1 q37.3 77682 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 UVM TCGA-WC-AA9A-01A 111 5'UTR-5'UTR Inter-chr q24.33 q13.33 77683 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786620 - DHPS chr19 12786852 - Exonic hg19 SARC TCGA-DX-A3UF-01A 8 5'UTR-CDS Intra-chr p13.13 p13.13 77684 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SPARC-FN1 SPARC chr5 151042351 - FN1 chr2 216236821 - Exonic hg19 SARC TCGA-DX-A6BH-01A 4 3'UTR-3'UTR Inter-chr q33.1 Tumor suppressor gene q35 Oncogene 77685 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786623 - DHPS chr19 12787950 - Exonic hg19 SARC TCGA-IW-A3M5-01A 12 5'UTR-CDS Intra-chr p13.13 p13.13 77686 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTB-BSG ACTB chr7 5566902 - BSG chr19 581362 - Exonic hg19 SARC TCGA-DX-A3U9-01A 2 3'UTR-CDS Inter-chr p22.1 p13.3 77687 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2017975 - COL1A1 chr17 48270011 + Exonic hg19 SARC TCGA-IF-A3RQ-01A 20 3'UTR-CDS Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77688 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018256 - COL1A1 chr17 48264051 + Exonic hg19 SARC TCGA-IF-A3RQ-01A 19 3'UTR-CDS Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77689 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402490 - RPS11 chr19 50000813 + Exonic hg19 SARC TCGA-UE-A6QU-01A 44 5'UTR-5'UTR Inter-chr q24.33 q13.33 77690 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 SARC TCGA-DX-A23U-01A 40 5'UTR-5'UTR Inter-chr q24.33 q13.33 77691 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 SARC TCGA-MB-A5Y9-01A 52 5'UTR-5'UTR Inter-chr q24.33 q13.33 77692 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018710 + COL1A1 chr17 48261725 - Exonic hg19 SARC TCGA-DX-A1KW-01A 47 3'UTR-3'UTR Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77693 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2017757 - COL1A1 chr17 48264458 - Exonic hg19 SARC TCGA-DX-A1KW-01A 8 3'UTR-CDS Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77694 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018665 - COL1A1 chr17 48261720 - Exonic hg19 SARC TCGA-DX-A1KW-01A 8 3'UTR-3'UTR Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77695 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 SARC TCGA-X6-A7WB-01A 15 5'UTR-5'UTR Inter-chr q24.33 q13.33 77696 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PCPG TCGA-RW-A67X-01A 32 5'UTR-5'UTR Inter-chr q24.33 q13.33 77697 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PCPG TCGA-SP-A6QF-01A 72 5'UTR-5'UTR Inter-chr q24.33 q13.33 77698 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PCPG TCGA-RW-A688-01A 37 5'UTR-5'UTR Inter-chr q24.33 q13.33 77699 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PCPG TCGA-XG-A823-01A 43 5'UTR-5'UTR Inter-chr q24.33 q13.33 77700 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786597 - DHPS chr19 12786855 - Exonic hg19 UCEC TCGA-EY-A2OQ-01A 11 5'UTR-CDS Intra-chr p13.13 p13.13 77701 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402414 - RPS11 chr19 50001193 + Exonic hg19 UCEC TCGA-A5-A2K3-01A 47 5'UTR-5'UTR Inter-chr q24.33 q13.33 77702 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 UCEC TCGA-BK-A6W4-01A 48 5'UTR-5'UTR Inter-chr q24.33 q13.33 77703 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165841 - PPP1CA chr11 67166220 - Exonic hg19 UCEC TCGA-AX-A3G6-01A 5 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77704 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FOXP2-RPL36 FOXP2 chr7 113937158 - RPL36 chr19 5691541 + Exonic hg19 UCEC TCGA-DF-A2KZ-01A 24 5'UTR-CDS Inter-chr q31.1 Transcription factor p13.3 77705 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COG1-FAM104A COG1 chr17 71204433 - FAM104A chr17 71204651 - Exonic hg19 UCEC TCGA-BG-A3EW-01A 9 CDS-3'UTR Intra-chr q25.1 q25.1 77706 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 UCEC TCGA-QF-A5YT-01A 66 5'UTR-5'UTR Inter-chr q24.33 q13.33 77707 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 UCEC TCGA-EY-A2OO-01A 52 5'UTR-5'UTR Inter-chr q24.33 q13.33 77708 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 UCEC TCGA-BG-A2AD-11A 33 5'UTR-5'UTR Inter-chr q24.33 q13.33 77709 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 UCEC TCGA-AJ-A3BH-01A 43 5'UTR-5'UTR Inter-chr q24.33 q13.33 77710 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 UCEC TCGA-B5-A5OE-01A 54 5'UTR-5'UTR Inter-chr q24.33 q13.33 77711 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TOB2-ACO2 TOB2 chr22 41842378 - ACO2 chr22 41903794 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 10 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 77712 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TOB2-ACO2 TOB2 chr22 41842382 - ACO2 chr22 41903794 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 10 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 77713 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 49 5'UTR-5'UTR Inter-chr q24.33 q13.33 77714 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 UCEC TCGA-AJ-A8CV-01A 33 5'UTR-5'UTR Inter-chr q24.33 q13.33 77715 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 UCEC TCGA-AJ-A5DW-01A 39 5'UTR-5'UTR Inter-chr q24.33 q13.33 77716 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 UCEC TCGA-JU-AAVI-01A 46 5'UTR-5'UTR Inter-chr q24.33 q13.33 77717 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 UCEC TCGA-JU-AAVI-01A 46 5'UTR-5'UTR Inter-chr q24.33 q13.33 77718 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 UCEC TCGA-EY-A72D-01A 33 5'UTR-5'UTR Inter-chr q24.33 q13.33 77719 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RHOA-DAG1 RHOA chr3 49412866 - DAG1 chr3 49572175 - Exonic hg19 UCEC TCGA-EY-A54A-01A 24 CDS-3'UTR Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 77720 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786620 - DHPS chr19 12786876 - Exonic hg19 UCEC TCGA-A5-A1OH-01A 15 5'UTR-CDS Intra-chr p13.13 p13.13 77721 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 UCEC TCGA-EY-A1GO-01A 49 5'UTR-5'UTR Inter-chr q24.33 q13.33 77722 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EVC-CRMP1 EVC chr4 5815851 - CRMP1 chr4 5825457 - Exonic hg19 UCEC TCGA-AJ-A3NF-01A 10 3'UTR-CDS Intra-chr p16.2 p16.2 77723 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165741 - PPP1CA chr11 67165962 - Exonic hg19 UCEC TCGA-B5-A3FB-01A 6 3'UTR-3'UTR Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77724 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MSH6-FBXO11 MSH6 chr2 48033706 - FBXO11 chr2 48034058 - Exonic hg19 UCEC TCGA-QS-A5YR-01A 6 CDS-3'UTR Intra-chr p16.3 Oncogene p16.3 77725 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380769 - TBC1D17 chr19 50386118 + Exonic hg19 OV TCGA-23-1023-01R 29 5'UTR-CDS Intra-chr q13.33 q13.33 77726 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380944 - TBC1D17 chr19 50382074 + Exonic hg19 OV TCGA-09-0367-01A 5 5'UTR-CDS Intra-chr q13.33 q13.33 77727 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380947 - TBC1D17 chr19 50385618 + Exonic hg19 OV TCGA-23-1023-01R 33 5'UTR-CDS Intra-chr q13.33 q13.33 77728 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380950 - TBC1D17 chr19 50385614 + Exonic hg19 OV TCGA-10-0926-01A 7 5'UTR-CDS Intra-chr q13.33 q13.33 77729 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380956 - TBC1D17 chr19 50382408 + Exonic hg19 OV TCGA-24-1430-01A 17 5'UTR-CDS Intra-chr q13.33 q13.33 77730 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380963 - TBC1D17 chr19 50386040 + Exonic hg19 OV TCGA-10-0926-01A 7 5'UTR-CDS Intra-chr q13.33 q13.33 77731 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380943 - TBC1D17 chr19 50385630 - Exonic hg19 OV TCGA-09-0369-01A 29 5'UTR-CDS Intra-chr q13.33 q13.33 77732 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 OV TCGA-09-0369-01A 11 5'UTR-5'UTR Inter-chr q24.33 q13.33 77733 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 OV TCGA-13-1409-01A 2 5'UTR-5'UTR Inter-chr q24.33 q13.33 77734 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 OV TCGA-24-1430-01A 14 5'UTR-5'UTR Inter-chr q24.33 q13.33 77735 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 OV TCGA-61-2092-01A 11 5'UTR-5'UTR Inter-chr q24.33 q13.33 77736 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402415 - RPS11 chr19 49999668 + Exonic hg19 OV TCGA-04-1343-01A 42 5'UTR-5'UTR Inter-chr q24.33 q13.33 77737 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402415 - RPS11 chr19 49999668 + Exonic hg19 OV TCGA-09-0369-01A 11 5'UTR-5'UTR Inter-chr q24.33 q13.33 77738 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402415 - RPS11 chr19 49999668 + Exonic hg19 OV TCGA-23-1023-01R 20 5'UTR-5'UTR Inter-chr q24.33 q13.33 77739 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402415 - RPS11 chr19 49999668 + Exonic hg19 OV TCGA-29-A5NZ-01A 12 5'UTR-5'UTR Inter-chr q24.33 q13.33 77740 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402468 - RPS11 chr19 50001193 + Exonic hg19 OV TCGA-04-1343-01A 42 5'UTR-5'UTR Inter-chr q24.33 q13.33 77741 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402494 - RPS11 chr19 50000535 + Exonic hg19 OV TCGA-20-1685-01A 9 5'UTR-5'UTR Inter-chr q24.33 q13.33 77742 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402501 - RPS11 chr19 50001193 + Exonic hg19 OV TCGA-61-2110-01A 5 5'UTR-5'UTR Inter-chr q24.33 q13.33 77743 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402503 - RPS11 chr19 50001188 + Exonic hg19 OV TCGA-09-0369-01A 11 5'UTR-5'UTR Inter-chr q24.33 q13.33 77744 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402503 - RPS11 chr19 50001188 + Exonic hg19 OV TCGA-20-1685-01A 9 5'UTR-5'UTR Inter-chr q24.33 q13.33 77745 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380935 - TBC1D17 chr19 50383532 + Exonic hg19 OV TCGA-30-1862-01A 4 5'UTR-CDS Intra-chr q13.33 q13.33 77746 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165651 - PPP1CA chr11 67168657 - Exonic hg19 OV TCGA-30-1862-01A 47 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77747 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165662 - PPP1CA chr11 67166286 - Exonic hg19 OV TCGA-29-1774-01A 13 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77748 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165689 - PPP1CA chr11 67166074 - Exonic hg19 OV TCGA-24-1464-01A 86 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77749 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165759 - PPP1CA chr11 67168794 - Exonic hg19 OV TCGA-13-1404-01A 48 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77750 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165762 - PPP1CA chr11 67169302 - Exonic hg19 OV TCGA-04-1536-01A 46 3'UTR-5'UTR Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77751 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165772 - PPP1CA chr11 67166615 - Exonic hg19 OV TCGA-61-1743-01A 54 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77752 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165801 - PPP1CA chr11 67166279 - Exonic hg19 OV TCGA-04-1536-01A 46 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77753 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165820 - PPP1CA chr11 67166117 - Exonic hg19 OV TCGA-13-1404-01A 48 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77754 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786631 - DHPS chr19 12788070 - Exonic hg19 OV TCGA-31-1951-01A 41 5'UTR-CDS Intra-chr p13.13 p13.13 77755 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AIMP2-EIF2AK1 AIMP2 chr7 6063222 - EIF2AK1 chr7 6063698 - Exonic hg19 OV TCGA-61-1743-01A 33 CDS-3'UTR Intra-chr p22.1 Tumor suppressor gene p22.1 77756 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AIMP2-EIF2AK1 AIMP2 chr7 6063267 - EIF2AK1 chr7 6063974 - Exonic hg19 OV TCGA-23-1024-01A 9 CDS-3'UTR Intra-chr p22.1 Tumor suppressor gene p22.1 77757 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380935 - TBC1D17 chr19 50383532 + Exonic hg19 OV TCGA-25-1324-01A 15 5'UTR-CDS Intra-chr q13.33 q13.33 77758 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380950 - TBC1D17 chr19 50385614 + Exonic hg19 OV TCGA-29-1698-01A 7 5'UTR-CDS Intra-chr q13.33 q13.33 77759 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380969 - TBC1D17 chr19 50382407 + Exonic hg19 OV TCGA-24-1549-01A 9 5'UTR-CDS Intra-chr q13.33 q13.33 77760 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50372533 - TBC1D17 chr19 50381633 - Exonic hg19 OV TCGA-25-1324-01A 26 3'UTR-CDS Intra-chr q13.33 q13.33 77761 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018076 - COL1A1 chr17 48265339 - Exonic hg19 OV TCGA-29-1698-01A 8 3'UTR-CDS Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77762 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018170 - COL1A1 chr17 48275360 - Exonic hg19 OV TCGA-29-1698-01A 2 3'UTR-CDS Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77763 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018190 - COL1A1 chr17 48265958 - Exonic hg19 OV TCGA-29-1698-01A 8 3'UTR-CDS Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77764 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018215 - COL1A1 chr17 48264480 - Exonic hg19 OV TCGA-29-1698-01A 8 3'UTR-CDS Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77765 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018354 - COL1A1 chr17 48263317 - Exonic hg19 OV TCGA-29-1698-01A 8 3'UTR-CDS Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77766 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018403 - COL1A1 chr17 48264066 - Exonic hg19 OV TCGA-29-1698-01A 8 3'UTR-CDS Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77767 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018404 - COL1A1 chr17 48265340 - Exonic hg19 OV TCGA-29-1698-01A 8 3'UTR-CDS Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77768 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018472 - COL1A1 chr17 48263198 - Exonic hg19 OV TCGA-29-1698-01A 8 3'UTR-CDS Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77769 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018537 - COL1A1 chr17 48262775 - Exonic hg19 OV TCGA-29-1698-01A 8 3'UTR-3'UTR Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77770 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018547 - COL1A1 chr17 48261782 - Exonic hg19 OV TCGA-29-1698-01A 8 3'UTR-3'UTR Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77771 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018667 - COL1A1 chr17 48262841 - Exonic hg19 OV TCGA-29-1698-01A 8 3'UTR-3'UTR Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77772 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018669 - COL1A1 chr17 48264465 - Exonic hg19 OV TCGA-29-1698-01A 8 3'UTR-CDS Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77773 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018682 - COL1A1 chr17 48262038 - Exonic hg19 OV TCGA-29-1698-01A 8 3'UTR-3'UTR Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77774 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018720 - COL1A1 chr17 48263211 - Exonic hg19 OV TCGA-29-1698-01A 8 3'UTR-CDS Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77775 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018741 - COL1A1 chr17 48262918 - Exonic hg19 OV TCGA-29-1698-01A 8 3'UTR-CDS Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77776 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018766 - COL1A1 chr17 48262810 - Exonic hg19 OV TCGA-29-1698-01A 8 3'UTR-3'UTR Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77777 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018932 - COL1A1 chr17 48262871 - Exonic hg19 OV TCGA-29-1698-01A 8 3'UTR-CDS Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77778 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AIMP2-EIF2AK1 AIMP2 chr7 6057587 - EIF2AK1 chr7 6063849 - Exonic hg19 OV TCGA-59-2352-01A 9 CDS-3'UTR Intra-chr p22.1 Tumor suppressor gene p22.1 77779 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AIMP2-EIF2AK1 AIMP2 chr7 6063233 - EIF2AK1 chr7 6064142 - Exonic hg19 OV TCGA-13-1481-01A 10 CDS-3'UTR Intra-chr p22.1 Tumor suppressor gene p22.1 77780 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165745 - PPP1CA chr11 67166509 - Exonic hg19 OV TCGA-24-2281-01A 19 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77781 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165762 - PPP1CA chr11 67166615 - Exonic hg19 OV TCGA-24-1549-01A 43 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77782 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165807 - PPP1CA chr11 67166543 - Exonic hg19 OV TCGA-24-1426-01A 27 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77783 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165807 - PPP1CA chr11 67166543 - Exonic hg19 OV TCGA-59-2351-01A 27 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77784 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165817 - PPP1CA chr11 67166559 - Exonic hg19 OV TCGA-24-2281-01A 19 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77785 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165825 - PPP1CA chr11 67166509 - Exonic hg19 OV TCGA-29-1698-01A 20 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77786 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165833 - PPP1CA chr11 67166623 - Exonic hg19 OV TCGA-31-1944-01A 14 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77787 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165837 - PPP1CA chr11 67166105 - Exonic hg19 OV TCGA-24-1549-01A 43 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77788 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165848 - PPP1CA chr11 67166604 - Exonic hg19 OV TCGA-29-1698-01A 20 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77789 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165867 - PPP1CA chr11 67166271 - Exonic hg19 OV TCGA-29-1781-01A 42 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77790 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2017868 + COL1A1 chr17 48262949 - Exonic hg19 OV TCGA-13-1481-01A 10 3'UTR-CDS Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77791 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2017873 + COL1A1 chr17 48262844 - Exonic hg19 OV TCGA-13-1481-01A 10 3'UTR-3'UTR Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77792 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018270 + COL1A1 chr17 48261903 - Exonic hg19 OV TCGA-29-1698-01A 4 3'UTR-3'UTR Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77793 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018983 + COL1A1 chr17 48261765 - Exonic hg19 OV TCGA-29-1698-01A 4 3'UTR-3'UTR Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77794 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SRSF9-GATC SRSF9 chr12 120900036 - GATC chr12 120899192 + Exonic hg19 OV TCGA-25-1324-01A 12 CDS-5'UTR Intra-chr q24.31 q24.31 77795 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PAK2-LOC646214 PAK2 chr3 196533536 + LOC646214 chr15 21937545 + Exonic hg19 OV TCGA-24-1549-01A 5 CDS-3'UTR Inter-chr q29 STE:STE20 77796 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PAK2-LOC646214 PAK2 chr3 196547381 + LOC646214 chr15 21936765 + Exonic hg19 OV TCGA-29-1698-01A 4 CDS-3'UTR Inter-chr q29 STE:STE20 77797 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380953 - TBC1D17 chr19 50385334 + Exonic hg19 OV TCGA-13-1511-01A 6 5'UTR-CDS Intra-chr q13.33 q13.33 77798 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165741 - PPP1CA chr11 67166507 - Exonic hg19 OV TCGA-59-2348-01A 35 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77799 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165755 - PPP1CA chr11 67166052 - Exonic hg19 OV TCGA-20-1686-01A 5 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77800 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165762 - PPP1CA chr11 67169302 - Exonic hg19 OV TCGA-24-0982-01A 20 3'UTR-5'UTR Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77801 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165787 - PPP1CA chr11 67166286 - Exonic hg19 OV TCGA-13-1489-02A 33 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77802 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165801 - PPP1CA chr11 67166279 - Exonic hg19 OV TCGA-24-0982-01A 20 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77803 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165818 - PPP1CA chr11 67166560 - Exonic hg19 OV TCGA-13-1489-02A 33 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77804 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165844 - PPP1CA chr11 67166286 - Exonic hg19 OV TCGA-25-1634-01A 26 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77805 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 49999668 + Exonic hg19 OV TCGA-10-0927-01A 18 5'UTR-5'UTR Inter-chr q24.33 q13.33 77806 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 OV TCGA-09-1667-01C 23 5'UTR-5'UTR Inter-chr q24.33 q13.33 77807 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402415 - RPS11 chr19 49999668 + Exonic hg19 OV TCGA-13-1492-01A 22 5'UTR-5'UTR Inter-chr q24.33 q13.33 77808 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402415 - RPS11 chr19 49999668 + Exonic hg19 OV TCGA-30-1892-01A 2 5'UTR-5'UTR Inter-chr q24.33 q13.33 77809 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402500 - RPS11 chr19 50001203 + Exonic hg19 OV TCGA-10-0927-01A 18 5'UTR-5'UTR Inter-chr q24.33 q13.33 77810 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AIMP2-EIF2AK1 AIMP2 chr7 6062773 + EIF2AK1 chr7 6063699 - Exonic hg19 OV TCGA-09-1667-01C 16 CDS-3'UTR Intra-chr p22.1 Tumor suppressor gene p22.1 77811 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AIMP2-EIF2AK1 AIMP2 chr7 6062863 + EIF2AK1 chr7 6063606 - Exonic hg19 OV TCGA-13-1492-01A 10 CDS-3'UTR Intra-chr p22.1 Tumor suppressor gene p22.1 77812 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AIMP2-EIF2AK1 AIMP2 chr7 6063287 + EIF2AK1 chr7 6064162 - Exonic hg19 OV TCGA-09-1667-01C 14 CDS-3'UTR Intra-chr p22.1 Tumor suppressor gene p22.1 77813 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380950 - TBC1D17 chr19 50385614 + Exonic hg19 OV TCGA-24-1604-01A 15 5'UTR-CDS Intra-chr q13.33 q13.33 77814 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380612 - TBC1D17 chr19 50381850 - Exonic hg19 OV TCGA-24-2290-01A 14 5'UTR-CDS Intra-chr q13.33 q13.33 77815 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402415 - RPS11 chr19 49999668 + Exonic hg19 OV TCGA-24-0966-01A 25 5'UTR-5'UTR Inter-chr q24.33 q13.33 77816 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402415 - RPS11 chr19 49999668 + Exonic hg19 OV TCGA-24-1604-01A 70 5'UTR-5'UTR Inter-chr q24.33 q13.33 77817 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402494 - RPS11 chr19 50000535 + Exonic hg19 OV TCGA-36-1570-01A 21 5'UTR-5'UTR Inter-chr q24.33 q13.33 77818 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402500 - RPS11 chr19 50001203 + Exonic hg19 OV TCGA-04-1519-01A 7 5'UTR-5'UTR Inter-chr q24.33 q13.33 77819 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402500 - RPS11 chr19 50001203 + Exonic hg19 OV TCGA-13-0897-01A 4 5'UTR-5'UTR Inter-chr q24.33 q13.33 77820 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402500 - RPS11 chr19 50001203 + Exonic hg19 OV TCGA-29-1776-01A 17 5'UTR-5'UTR Inter-chr q24.33 q13.33 77821 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402500 - RPS11 chr19 50001203 + Exonic hg19 OV TCGA-59-2350-01A 19 5'UTR-5'UTR Inter-chr q24.33 q13.33 77822 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402501 - RPS11 chr19 50001193 + Exonic hg19 OV TCGA-29-1703-01A 9 5'UTR-5'UTR Inter-chr q24.33 q13.33 77823 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67164967 - PPP1CA chr11 67165913 - Exonic hg19 OV TCGA-04-1519-01A 37 CDS-3'UTR Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77824 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165658 - PPP1CA chr11 67168557 - Exonic hg19 OV TCGA-29-1776-01A 32 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77825 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165662 - PPP1CA chr11 67166286 - Exonic hg19 OV TCGA-24-1604-01A 21 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77826 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165678 - PPP1CA chr11 67166483 - Exonic hg19 OV TCGA-36-1569-01A 7 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77827 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165695 - PPP1CA chr11 67166505 - Exonic hg19 OV TCGA-29-1703-01A 17 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77828 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165754 - PPP1CA chr11 67166287 - Exonic hg19 OV TCGA-13-1509-01A 50 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77829 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165806 - PPP1CA chr11 67168389 - Exonic hg19 OV TCGA-24-1604-01A 22 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 77830 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018512 - COL1A1 chr17 48264162 - Exonic hg19 OV TCGA-24-2290-01A 3 3'UTR-CDS Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 77831 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COG1-FAM104A COG1 chr17 71204436 - FAM104A chr17 71204650 - Exonic hg19 UVM TCGA-V4-A9F1-01A 8 CDS-3'UTR Intra-chr q25.1 q25.1 77832 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402414 - RPS11 chr19 50001193 + Exonic hg19 UVM TCGA-V4-A9E8-01A 18 5'UTR-5'UTR Inter-chr q24.33 q13.33 77833 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 UVM TCGA-WC-A883-01A 24 5'UTR-5'UTR Inter-chr q24.33 q13.33 77834 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 UVM TCGA-VD-A8KH-01A 37 5'UTR-5'UTR Inter-chr q24.33 q13.33 77835 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402491 - RPS11 chr19 50000814 + Exonic hg19 UVM TCGA-YZ-A983-01A 38 5'UTR-5'UTR Inter-chr q24.33 q13.33 77836 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 UVM TCGA-YZ-A984-01A 49 5'UTR-5'UTR Inter-chr q24.33 q13.33 77837 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402501 - RPS11 chr19 50001193 + Exonic hg19 UVM TCGA-V4-A9F0-01A 57 5'UTR-5'UTR Inter-chr q24.33 q13.33 77838 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 UVM TCGA-VD-A8KO-01A 31 5'UTR-5'UTR Inter-chr q24.33 q13.33 77839 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 UVM TCGA-VD-AA8N-01A 29 5'UTR-5'UTR Inter-chr q24.33 q13.33 77840 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 UVM TCGA-VD-AA8T-01A 35 5'UTR-5'UTR Inter-chr q24.33 q13.33 77841 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 UVM TCGA-VD-A8K7-01B 44 5'UTR-5'UTR Inter-chr q24.33 q13.33 77842 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 UVM TCGA-VD-A8KD-01A 54 5'UTR-5'UTR Inter-chr q24.33 q13.33 77843 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402500 - RPS11 chr19 50001203 + Exonic hg19 UVM TCGA-VD-AA8P-01A 40 5'UTR-5'UTR Inter-chr q24.33 q13.33 77844 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 UVM TCGA-V4-A9EJ-01A 28 5'UTR-5'UTR Inter-chr q24.33 q13.33 77845 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 UVM TCGA-WC-A87Y-01A 32 5'UTR-5'UTR Inter-chr q24.33 q13.33 77846 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-HDLBP TMPRSS2 chr21 42848503 - HDLBP chr2 242167824 - Exonic hg19 PRAD TCGA-G9-6351-01A 2841 CDS-3'UTR Inter-chr q22.3 q37.3 Seq+ 77847 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-HC-7075-01A 140 5'UTR-5'UTR Inter-chr q24.33 q13.33 77848 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NEDD4L-LOC400548 NEDD4L chr18 56040500 + LOC400548 chr16 85177423 + Exonic hg19 PRAD TCGA-HC-7752-01A 263 CDS-5'UTR Inter-chr q21.31 Tumor suppressor gene 77849 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF10-SPATA17 ZNF10 chr12 133707339 + SPATA17 chr1 218036115 + Exonic hg19 PRAD TCGA-HC-7077-01A 130 5'UTR-CDS Inter-chr q24.33 Transcription factor q41 Seq+ 77850 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF10-SPATA17 ZNF10 chr12 133707598 + SPATA17 chr1 218036114 + Exonic hg19 PRAD TCGA-HC-7077-01A 130 5'UTR-CDS Inter-chr q24.33 Transcription factor q41 Seq+ 77851 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GIGYF2-TRPM8 GIGYF2 chr2 233594970 + TRPM8 chr2 234905159 - Exonic hg19 PRAD TCGA-HC-7077-01A 115 5'UTR-CDS Intra-chr q37.1 q37.1 77852 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF115-C1orf116 RNF115 chr1 145636717 + C1orf116 chr1 207194150 + Exonic hg19 PRAD TCGA-HC-7077-01A 145 CDS-3'UTR Intra-chr q21.1 q32.1 77853 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MEF2D-APOA2 MEF2D chr1 156470277 - APOA2 chr1 161193214 - Exonic hg19 PRAD TCGA-EJ-5518-01A 710 5'UTR-5'UTR Intra-chr q22 Transcription factor q23.3 Seq+ 77854 ChimerSeq Tophat-Fusion TCGA_RNA-Seq USF1-UCK2 USF1 chr1 161015647 - UCK2 chr1 165865426 + Exonic hg19 PRAD TCGA-EJ-5518-01A 102 5'UTR-CDS Intra-chr q23.3 Transcription factor q24.1 Seq+ 77855 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NUP62-LOC100129935 NUP62 chr19 50432582 - LOC100129935 chr19 40130530 + Exonic hg19 PRAD TCGA-V1-A9O5-06A 293 5'UTR-5'UTR Intra-chr q13.33 77856 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NUP62-LOC100129935 NUP62 chr19 50432582 - LOC100129935 chr19 40130533 + Exonic hg19 PRAD TCGA-V1-A9O5-06A 293 5'UTR-5'UTR Intra-chr q13.33 77857 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NUP62-LOC100129935 NUP62 chr19 50432606 - LOC100129935 chr19 40130533 + Exonic hg19 PRAD TCGA-V1-A9O5-06A 293 5'UTR-5'UTR Intra-chr q13.33 77858 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NUP62-LOC100129935 NUP62 chr19 50432673 - LOC100129935 chr19 40130530 + Exonic hg19 PRAD TCGA-V1-A9O5-06A 293 5'UTR-5'UTR Intra-chr q13.33 77859 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CAMK1D-FBL CAMK1D chr10 12570484 + FBL chr19 40325097 + Exonic hg19 PRAD TCGA-V1-A9O5-06A 245 CDS-3'UTR Inter-chr p13 77860 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MEF2D-SLC45A3 MEF2D chr1 156448999 - SLC45A3 chr1 205649521 + Exonic hg19 PRAD TCGA-G9-6499-11A 364 CDS-5'UTR Intra-chr q22 Transcription factor q32.1 77861 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MEF2D-SLC45A3 MEF2D chr1 156450877 - SLC45A3 chr1 205649521 + Exonic hg19 PRAD TCGA-G9-6499-11A 364 CDS-5'UTR Intra-chr q22 Transcription factor q32.1 77862 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MEF2D-SLC45A3 MEF2D chr1 156453535 - SLC45A3 chr1 205649521 + Exonic hg19 PRAD TCGA-G9-6499-11A 356 5'UTR-5'UTR Intra-chr q22 Transcription factor q32.1 77863 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FASN-NUCKS1 FASN chr17 80038806 - NUCKS1 chr1 205687132 - Exonic hg19 PRAD TCGA-TK-A8OK-01A 605 CDS-3'UTR Inter-chr q25.3 q32.1 Seq+ 77864 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SMARCC2-ZNF761 SMARCC2 chr12 56556114 + ZNF761 chr19 53943080 + Exonic hg19 PRAD TCGA-ZG-A9L5-01A 107 3'UTR-5'UTR Inter-chr q13.2 q13.42 Transcription factor 77865 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CDC27-MYL4 CDC27 chr17 45266511 - MYL4 chr17 45286754 + Exonic hg19 PRAD TCGA-HC-7213-01A 197 CDS-5'UTR Intra-chr q21.32 q21.32 Seq+ 77866 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-HC-A631-01A 119 5'UTR-5'UTR Inter-chr q24.33 q13.33 77867 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PARK7-CFD PARK7 chr1 8029463 + CFD chr19 863422 - Exonic hg19 PRAD TCGA-KK-A8IH-01A 113 CDS-3'UTR Inter-chr p36.23 Tumor suppressor gene p13.3 77868 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PMEPA1-ETV4 PMEPA1 chr20 56286379 - ETV4 chr17 41613846 - Exonic hg19 PRAD TCGA-CH-5762-01A 694 5'UTR-CDS Inter-chr q13.31 q21.31 Oncogene Transcription factor Seq+ 77869 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-EJ-7330-01A 116 5'UTR-5'UTR Inter-chr q24.33 q13.33 77870 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PIKFYVE-TDRD3 PIKFYVE chr2 209222740 + TDRD3 chr13 61045995 + Exonic hg19 PRAD TCGA-J9-A52B-01A 166 3'UTR-CDS Inter-chr q34 q21.2 77871 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402285 - RPS11 chr19 50000534 + Exonic hg19 PRAD TCGA-KC-A4BL-01A 143 5'UTR-5'UTR Inter-chr q24.33 q13.33 77872 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402419 - RPS11 chr19 49999664 + Exonic hg19 PRAD TCGA-KC-A4BL-01A 143 5'UTR-5'UTR Inter-chr q24.33 q13.33 77873 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BBS4-CSNK1G1 BBS4 chr15 73030680 + CSNK1G1 chr15 64480228 - Exonic hg19 PRAD TCGA-M7-A725-01A 257 5'UTR-CDS Intra-chr q24.1 q22.31 Seq+ 77874 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CUX2-ANAPC11 CUX2 chr12 111512717 + ANAPC11 chr17 79852342 + Exonic hg19 PRAD TCGA-HI-7171-01A 107 CDS-5'UTR Inter-chr q24.11 Transcription factor q25.3 Seq+ 77875 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF808-IDS ZNF808 chr19 53059252 + IDS chrX 148564565 + Exonic hg19 PRAD TCGA-YL-A8SC-01A 152 3'UTR-3'UTR Inter-chr q13.41 Transcription factor q28 77876 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402503 - RPS11 chr19 50001191 + Exonic hg19 PRAD TCGA-KK-A7AZ-01A 108 5'UTR-5'UTR Inter-chr q24.33 q13.33 77877 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PVT1-EIF3E PVT1 chr8 128806979 + EIF3E chr8 109215731 - Exonic hg19 PRAD TCGA-KK-A7AZ-01A 3181 5'UTR-CDS Intra-chr q24.21 q23.1 Seq+ 77878 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FER-GNB2L1 FER chr5 108120900 + GNB2L1 chr5 180666106 + Exonic hg19 PRAD TCGA-QU-A6IN-01A 109 5'UTR-CDS Intra-chr q21.3 TK:Fer Tumor suppressor gene 77879 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CASZ1-DLEU1 CASZ1 chr1 10753930 - DLEU1 chr13 51102001 + Exonic hg19 PRAD TCGA-J4-A83I-01A 140 CDS-3'UTR Inter-chr p36.22 Transcription factor q14.2 Tumor suppressor gene Seq+ 77880 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CD68-WRAP53 CD68 chr17 7483783 - WRAP53 chr17 7590694 + Exonic hg19 PRAD TCGA-G9-6329-01A 277 CDS-5'UTR Intra-chr p13.1 p13.1 77881 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WRAP53-CHD3 WRAP53 chr17 7589744 + CHD3 chr17 7811975 - Exonic hg19 PRAD TCGA-YL-A9WL-01A 204 5'UTR-CDS Intra-chr p13.1 p13.1 77882 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-YL-A9WL-01A 107 5'UTR-5'UTR Inter-chr q24.33 q13.33 77883 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRR15L-RAB5C PRR15L chr17 46035022 - RAB5C chr17 40282607 - Exonic hg19 PRAD TCGA-G9-6348-01A 144 5'UTR-5'UTR Intra-chr q21.32 q21.2 Seq+ 77884 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRR15L-KCNH4 PRR15L chr17 46035022 - KCNH4 chr17 40309135 - Exonic hg19 PRAD TCGA-G9-6348-01A 205 5'UTR-3'UTR Intra-chr q21.32 q21.2 Seq+ 77885 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DTX2-POR DTX2 chr7 76091152 + POR chr7 75583306 + Exonic hg19 PRAD TCGA-ZG-A9KY-01A 142 5'UTR-5'UTR Intra-chr q11.23 Seq+ 77886 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DTX2-POR DTX2 chr7 76093025 + POR chr7 75583306 + Exonic hg19 PRAD TCGA-ZG-A9KY-01A 142 5'UTR-5'UTR Intra-chr q11.23 Seq+ 77887 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TXNIP-MX1 TXNIP chr1 145440139 + MX1 chr21 42830831 - Exonic hg19 PRAD TCGA-YL-A9WH-01A 994 CDS-3'UTR Inter-chr q21.1 Tumor suppressor gene q22.3 77888 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GABARAP-NUP205 GABARAP chr17 7144124 - NUP205 chr7 135333151 + Exonic hg19 PRAD TCGA-V1-A9ZR-01A 172 3'UTR-CDS Inter-chr p13.1 Tumor suppressor gene q33 Seq+ 77889 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPP2R2C-KIAA0232 PPP2R2C chr4 6548792 - KIAA0232 chr4 6863442 - Exonic hg19 PRAD TCGA-HC-8265-01B 129 5'UTR-CDS Intra-chr p16.1 Tumor suppressor gene p16.1 77890 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ALDH1A3-USP25 ALDH1A3 chr15 101455642 + USP25 chr21 17203951 + Exonic hg19 PRAD TCGA-EJ-7328-01A 278 3'UTR-CDS Inter-chr q26.3 q21.1 Seq+ 77891 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KLK2-CELF5 KLK2 chr19 51382741 + CELF5 chr19 3252652 + Exonic hg19 PRAD TCGA-EJ-7328-01A 189 5'UTR-5'UTR Intra-chr q13.33 p13.3 77892 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SCAI-MAPKAP1 SCAI chr9 127904911 - MAPKAP1 chr9 128459018 + Exonic hg19 PRAD TCGA-XQ-A8TA-01A 103 CDS-5'UTR Intra-chr q33.3 q33.3 77893 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TOB2-MRPS18B TOB2 chr22 41840115 - MRPS18B chr6 30592659 + Exonic hg19 PRAD TCGA-2A-A8W1-01A 201 5'UTR-3'UTR Inter-chr q13.2 Seq+ 77894 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TOB2-MRPS18B TOB2 chr22 41842378 - MRPS18B chr6 30592659 + Exonic hg19 PRAD TCGA-2A-A8W1-01A 201 5'UTR-3'UTR Inter-chr q13.2 Seq+ 77895 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TOB2-MRPS18B TOB2 chr22 41842382 - MRPS18B chr6 30592659 + Exonic hg19 PRAD TCGA-2A-A8W1-01A 201 5'UTR-3'UTR Inter-chr q13.2 Seq+ 77896 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MAL2-ZNF770 MAL2 chr8 120233996 + ZNF770 chr15 35276221 + Exonic hg19 PRAD TCGA-V1-A8MF-01A 101 CDS-5'UTR Inter-chr q24.12 q14 Transcription factor 77897 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BAX-WRAP53 BAX chr19 49459589 + WRAP53 chr17 7589951 + Exonic hg19 PRAD TCGA-EJ-5532-01A 142 5'UTR-5'UTR Inter-chr q13.33 Tumor suppressor gene p13.1 Seq+ 77898 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GDF11-RNF41 GDF11 chr12 56146623 + RNF41 chr12 56615543 + Exonic hg19 PRAD TCGA-J4-A67S-01A 560 3'UTR-3'UTR Intra-chr q13.2 q13.3 77899 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GDF11-RNF41 GDF11 chr12 56146623 + RNF41 chr12 56615686 + Exonic hg19 PRAD TCGA-J4-A67S-01A 560 3'UTR-3'UTR Intra-chr q13.2 q13.3 77900 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FAM162A-CSTA FAM162A chr3 122103145 + CSTA chr3 122044107 + Exonic hg19 PRAD TCGA-G9-A9S4-01A 122 CDS-5'UTR Intra-chr q21.1 q21.1 Seq+ 77901 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRIP1-ATXN7L3B GRIP1 chr12 67062182 - ATXN7L3B chr12 74932432 - Exonic hg19 PRAD TCGA-KK-A59X-01A 117 CDS-3'UTR Intra-chr q14.3 q21.1 77902 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LINGO2-DDX19A LINGO2 chr9 28317123 - DDX19A chr16 70390806 - Exonic hg19 PRAD TCGA-EJ-A65D-01A 130 5'UTR-CDS Inter-chr p21.1 q22.1 77903 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LINGO2-DDX19A LINGO2 chr9 28317125 - DDX19A chr16 70390149 - Exonic hg19 PRAD TCGA-EJ-A65D-01A 130 5'UTR-CDS Inter-chr p21.1 q22.1 77904 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC45A3-ZBTB7B SLC45A3 chr1 205649521 - ZBTB7B chr1 154986490 + Exonic hg19 PRAD TCGA-FC-A5OB-01A 230 5'UTR-5'UTR Intra-chr q32.1 q21.3 Transcription factor Seq+ 77905 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC45A3-ZBTB7B SLC45A3 chr1 205649521 - ZBTB7B chr1 154987130 + Exonic hg19 PRAD TCGA-FC-A5OB-01A 230 5'UTR-5'UTR Intra-chr q32.1 q21.3 Transcription factor Seq+ 77906 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPS11-GOLGA3 RPS11 chr19 50001213 + GOLGA3 chr12 133402521 - Exonic hg19 PRAD TCGA-CH-5768-01A 102 5'UTR-5'UTR Inter-chr q13.33 q24.33 77907 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRDX1-MMACHC PRDX1 chr1 45976751 - MMACHC chr1 45976722 + Exonic hg19 STAD TCGA-CG-4477-01A 116 3'UTR-3'UTR Intra-chr p34.1 p34.1 77908 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SPRR3-KRT4 SPRR3 chr1 152976095 - KRT4 chr12 53202201 - Exonic hg19 HNSC TCGA-CV-7103-11A 176 3'UTR-CDS Inter-chr q21.3 q13.13 77909 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SPRR3-KRT16 SPRR3 chr1 152976018 - KRT16 chr17 39768644 - Exonic hg19 HNSC TCGA-CV-7103-11A 126 3'UTR-CDS Inter-chr q21.3 q21.2 77910 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WHSC1-PIBF1 WHSC1 chr4 1873268 + PIBF1 chr13 73539411 + Exonic hg19 HNSC TCGA-HD-7753-01A 125 5'UTR-CDS Inter-chr Oncogene q21.33 Seq+ 77911 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DSP-KRT13 DSP chr6 7586550 - KRT13 chr17 39661602 - Exonic hg19 HNSC TCGA-CV-7103-11A 193 3'UTR-CDS Inter-chr p24.3 Tumor suppressor gene q21.2 77912 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NEUROD2-PSMD3 NEUROD2 chr17 37764088 - PSMD3 chr17 38151320 - Exonic hg19 HNSC TCGA-CV-5432-01A 8413 5'UTR-CDS Intra-chr q12 Transcription factor q21.1 77913 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CPSF6-COL16A1 CPSF6 chr12 69656341 + COL16A1 chr1 32118453 - Exonic hg19 HNSC TCGA-KU-A6H7-01A 342 3'UTR-CDS Inter-chr q15 p35.2 Seq+ 77914 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CPSF6-COL16A1 CPSF6 chr12 69659992 + COL16A1 chr1 32119008 - Exonic hg19 HNSC TCGA-KU-A6H7-01A 342 3'UTR-CDS Inter-chr q15 p35.2 Seq+ 77915 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COL16A1-CPSF6 COL16A1 chr1 32119199 - CPSF6 chr12 69663291 + Exonic hg19 HNSC TCGA-KU-A6H7-01A 120 CDS-3'UTR Inter-chr p35.2 q15 Seq+ 77916 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNH1-HRAS RNH1 chr11 506608 - HRAS chr11 533943 - Exonic hg19 HNSC TCGA-CR-7382-01A 261 5'UTR-CDS Intra-chr Tumor suppressor gene p15.5 Oncogene Seq+ 77917 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNH1-HRAS RNH1 chr11 507112 - HRAS chr11 533943 - Exonic hg19 HNSC TCGA-CR-7382-01A 261 5'UTR-CDS Intra-chr Tumor suppressor gene p15.5 Oncogene Seq+ 77918 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNH1-HRAS RNH1 chr11 507112 - HRAS chr11 534374 - Exonic hg19 HNSC TCGA-CR-7382-01A 261 5'UTR-5'UTR Intra-chr Tumor suppressor gene p15.5 Oncogene Seq+ 77919 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FXR2-WRAP53 FXR2 chr17 7495168 - WRAP53 chr17 7589395 - Exonic hg19 HNSC TCGA-BA-A4II-01A 116 CDS-5'UTR Intra-chr p13.1 p13.1 77920 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NUAK2-LEMD1 NUAK2 chr1 205280832 - LEMD1 chr1 205389701 - Exonic hg19 HNSC TCGA-BA-6871-01A 105 CDS-5'UTR Intra-chr q32.1 q32.1 Seq+ 77921 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DSP-KRT6A DSP chr6 7583287 - KRT6A chr12 52887037 - Exonic hg19 HNSC TCGA-BA-5151-01A 108 CDS-5'UTR Inter-chr p24.3 Tumor suppressor gene q13.13 77922 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 KIRC TCGA-CZ-5469-01A 130 5'UTR-5'UTR Inter-chr q24.33 q13.33 77923 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H2AFZ-TRAPPC10 H2AFZ chr4 100871430 + TRAPPC10 chr21 45466906 + Exonic hg19 KIRC TCGA-B4-5835-01A 100 5'UTR-CDS Inter-chr q23 q22.3 77924 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402281 - RPS11 chr19 49999697 + Exonic hg19 KIRC TCGA-CJ-4897-01A 100 5'UTR-5'UTR Inter-chr q24.33 q13.33 77925 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 KIRC TCGA-CJ-4897-01A 100 5'UTR-5'UTR Inter-chr q24.33 q13.33 77926 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ULK4-ATP6V0E1 ULK4 chr3 41900797 - ATP6V0E1 chr5 172447336 + Exonic hg19 KIRC TCGA-CJ-4897-01A 101 CDS-3'UTR Inter-chr p22.1 Other:ULK q35.1 77927 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMSB10-SCML2 TMSB10 chr2 85133209 - SCML2 chrX 18359438 - Exonic hg19 KIRC TCGA-CJ-4897-01A 392 CDS-5'UTR Inter-chr p11.2 p22.13 77928 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LRP1-SLC39A5 LRP1 chr12 57522813 + SLC39A5 chr12 56624987 + Exonic hg19 UCS TCGA-NA-A5I1-01A 120 CDS-5'UTR Intra-chr q13.3 q13.3 Seq+ 77929 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LRP1-SLC39A5 LRP1 chr12 57524937 + SLC39A5 chr12 56624987 + Exonic hg19 UCS TCGA-NA-A5I1-01A 120 CDS-5'UTR Intra-chr q13.3 q13.3 Seq+ 77930 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ARHGEF11-ETV3L ARHGEF11 chr1 157014090 - ETV3L chr1 157069347 - Exonic hg19 UCS TCGA-NA-A4R1-01A 109 CDS-5'UTR Intra-chr q23.1 q23.1 Transcription factor Seq+ 77931 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ARHGEF11-ETV3L ARHGEF11 chr1 157014090 - ETV3L chr1 157069366 - Exonic hg19 UCS TCGA-NA-A4R1-01A 109 CDS-5'UTR Intra-chr q23.1 q23.1 Transcription factor Seq+ 77932 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WASF2-FGR WASF2 chr1 27816494 - FGR chr1 27951659 - Exonic hg19 UCS TCGA-NA-A4R1-01A 142 5'UTR-5'UTR Intra-chr p36.11 p35.3 TK:Src Seq+ 77933 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZFP3-ARRB2 ZFP3 chr17 4981869 + ARRB2 chr17 4620511 + Exonic hg19 UCS TCGA-N9-A4Q8-01A 129 5'UTR-5'UTR Intra-chr p13.2 Transcription factor p13.2 Seq+ 77934 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SPTAN1-SGTA SPTAN1 chr9 131314974 + SGTA chr19 2761519 - Exonic hg19 UCS TCGA-NA-A4R1-01A 164 5'UTR-CDS Inter-chr q34.11 p13.3 Seq+ 77935 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UAP1-TSHZ2 UAP1 chr1 162551248 + TSHZ2 chr20 52060789 + Exonic hg19 BRCA TCGA-E9-A22D-01A 341 CDS-3'UTR Inter-chr q23.3 q13.2 Transcription factor Seq+ 77936 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UAP1-TSHZ2 UAP1 chr1 162551248 + TSHZ2 chr20 52103682 + Exonic hg19 BRCA TCGA-E9-A22D-01A 1081 CDS-3'UTR Inter-chr q23.3 q13.2 Transcription factor Seq+ 77937 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PHLDA3-MYBPH PHLDA3 chr1 201437468 - MYBPH chr1 203139577 - Exonic hg19 BRCA TCGA-E9-A22D-01A 101 3'UTR-CDS Intra-chr q32.1 Tumor suppressor gene q32.1 Seq+ 77938 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RARA-ANKFN1 RARA chr17 38474699 + ANKFN1 chr17 54367287 - Exonic hg19 BRCA TCGA-E9-A22D-01A 129 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q22 77939 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMEM154-SORBS2 TMEM154 chr4 153562407 - SORBS2 chr4 186696380 + Exonic hg19 BRCA TCGA-A2-A04T-01A 109 CDS-5'UTR Intra-chr q31.3 q35.1 77940 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRRC2A-NCR3 PRRC2A chr6 31604384 + NCR3 chr6 31557675 - Exonic hg19 BRCA TCGA-D8-A13Y-01A 212 In-Frame Intra-chr Seq+ 77941 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HSP90AB1-SLC29A1 HSP90AB1 chr6 44214931 + SLC29A1 chr6 44194996 + Exonic hg19 BRCA TCGA-BH-A0WA-01A 494 5'UTR-5'UTR Intra-chr p21.1 Oncogene p21.1 Seq+ 77942 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HSP90AB1-SLC29A1 HSP90AB1 chr6 44214931 + SLC29A1 chr6 44194999 + Exonic hg19 BRCA TCGA-BH-A0WA-01A 494 5'UTR-5'UTR Intra-chr p21.1 Oncogene p21.1 Seq+ 77943 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SYTL2-CHRM1 SYTL2 chr11 85411557 - CHRM1 chr11 62678649 - Exonic hg19 BRCA TCGA-BH-A201-01A 311 CDS-5'UTR Intra-chr q14.1 q12.3 Seq+ 77944 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTTN-BCAR4 CTTN chr11 70256065 + BCAR4 chr16 11914153 - Exonic hg19 BRCA TCGA-B6-A40B-01A 395 CDS-3'UTR Inter-chr q13.3 p13.13 Seq+ 77945 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BPTF-PRKAR1A BPTF chr17 65972073 + PRKAR1A chr17 66495460 - Exonic hg19 BRCA TCGA-AN-A0XR-01A 101 CDS-5'UTR Intra-chr q24.2 Transcription factor q24.2 Oncogene Tumor suppressor gene 77946 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BPTF-PRKAR1A BPTF chr17 65972073 + PRKAR1A chr17 66495463 - Exonic hg19 BRCA TCGA-AN-A0XR-01A 101 CDS-5'UTR Intra-chr q24.2 Transcription factor q24.2 Oncogene Tumor suppressor gene 77947 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26796139 - FOXO1 chr13 41192773 + Exonic hg19 BRCA TCGA-BH-A1EV-11A 102 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 77948 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GPSM2-WDR47 GPSM2 chr1 109461410 + WDR47 chr1 109572664 + Exonic hg19 BRCA TCGA-E2-A1LL-01A 114 CDS-5'UTR Intra-chr p13.3 p13.3 77949 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CANT1-FBXL20 CANT1 chr17 76996181 - FBXL20 chr17 37459891 - Exonic hg19 BRCA TCGA-C8-A12M-01A 200 5'UTR-CDS Intra-chr q25.3 q12 Seq+ 77950 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CANT1-FBXL20 CANT1 chr17 77001453 - FBXL20 chr17 37459891 - Exonic hg19 BRCA TCGA-C8-A12M-01A 200 5'UTR-CDS Intra-chr q25.3 q12 Seq+ 77951 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26796139 - FOXO1 chr13 41192773 + Exonic hg19 BRCA TCGA-C8-A12M-01A 122 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 77952 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PIP4K2B-KPNB1 PIP4K2B chr17 36923820 - KPNB1 chr17 45757385 + Exonic hg19 BRCA TCGA-BH-A1F2-01A 549 3'UTR-CDS Intra-chr q12 q21.32 Seq+ 77953 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ULBP2-CADPS2 ULBP2 chr6 150269223 + CADPS2 chr7 122192979 + Exonic hg19 BRCA TCGA-A8-A07F-01A 119 3'UTR-CDS Inter-chr q25.1 q31.32 77954 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SORCS3-THBS1 SORCS3 chr10 107011646 - THBS1 chr15 39888956 + Exonic hg19 BRCA TCGA-GI-A2C9-01A 136 CDS-3'UTR Inter-chr q25.1 q14 Oncogene Tumor suppressor gene 77955 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26796139 - FOXO1 chr13 41192773 + Exonic hg19 BRCA TCGA-GI-A2C9-01A 180 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 77956 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KDM2A-SIPA1L3 KDM2A chr11 66888828 + SIPA1L3 chr19 38490421 - Exonic hg19 BRCA TCGA-AC-A2FM-01A 122 5'UTR-5'UTR Inter-chr q13.2 Transcription factor q13.13 77957 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MKL2-BCAR4 MKL2 chr16 14173210 + BCAR4 chr16 11914153 - Exonic hg19 BRCA TCGA-AO-A0JL-01A 151 5'UTR-3'UTR Intra-chr p13.12 p13.13 Seq+ 77958 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MKL2-BCAR4 MKL2 chr16 14173210 + BCAR4 chr16 11914154 - Exonic hg19 BRCA TCGA-AO-A0JL-01A 151 5'UTR-3'UTR Intra-chr p13.12 p13.13 Seq+ 77959 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSC2-NPW TSC2 chr16 2100486 + NPW chr16 2069550 + Exonic hg19 BRCA TCGA-BH-A0B1-01A 103 CDS-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 77960 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANKRD30BL-PDE3A ANKRD30BL chr2 133012678 + PDE3A chr12 20704409 + Exonic hg19 BRCA TCGA-AC-A3OD-01B 120 5'UTR-5'UTR Inter-chr q21.2 p12.2 77961 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ILVBL-SYDE1 ILVBL chr19 15231092 - SYDE1 chr19 15225050 + Exonic hg19 BRCA TCGA-B6-A402-01A 102 CDS-3'UTR Intra-chr p13.12 p13.12 Seq+ 77962 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402414 - RPS11 chr19 50001193 + Exonic hg19 BRCA TCGA-AN-A0FW-01A 210 5'UTR-5'UTR Inter-chr q24.33 q13.33 77963 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SCD-GPR19 SCD chr10 102108102 + GPR19 chr12 12815403 - Exonic hg19 BRCA TCGA-A8-A07I-01A 154 CDS-5'UTR Inter-chr q24.31 p13.1 Seq+ 77964 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MALAT1-FADS1 MALAT1 chr11 65268284 + FADS1 chr11 61570930 - Exonic hg19 BRCA TCGA-LL-A6FQ-01A 611 5'UTR-CDS Intra-chr q13.1 q12.2 Seq+ 77965 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MALAT1-FADS1 MALAT1 chr11 65268907 + FADS1 chr11 61570930 - Exonic hg19 BRCA TCGA-LL-A6FQ-01A 611 5'UTR-CDS Intra-chr q13.1 q12.2 Seq+ 77966 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MALAT1-FADS1 MALAT1 chr11 65268984 + FADS1 chr11 61571091 - Exonic hg19 BRCA TCGA-LL-A6FQ-01A 611 5'UTR-CDS Intra-chr q13.1 q12.2 Seq+ 77967 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMEM135-ALDH3B2 TMEM135 chr11 86749227 + ALDH3B2 chr11 67434486 - Exonic hg19 BRCA TCGA-A8-A09C-01A 263 5'UTR-5'UTR Intra-chr q14.2 q13.2 Seq+ 77968 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMEM135-ALDH3B2 TMEM135 chr11 86749227 + ALDH3B2 chr11 67435105 - Exonic hg19 BRCA TCGA-A8-A09C-01A 263 5'UTR-5'UTR Intra-chr q14.2 q13.2 Seq+ 77969 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RARA-PCTP RARA chr17 38465537 + PCTP chr17 53848466 + Exonic hg19 BRCA TCGA-AN-A0FV-01A 3783 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 77970 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RARA-PCTP RARA chr17 38474699 + PCTP chr17 53848466 + Exonic hg19 BRCA TCGA-AN-A0FV-01A 3787 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 77971 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26796139 - FOXO1 chr13 41192773 + Exonic hg19 BRCA TCGA-AN-A0FV-01A 145 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 77972 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NSMCE2-PVT1 NSMCE2 chr8 126310829 + PVT1 chr8 128806979 - Exonic hg19 BRCA TCGA-AR-A0U2-01A 278 CDS-5'UTR Intra-chr q24.13 q24.21 77973 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NSMCE2-PVT1 NSMCE2 chr8 126344146 + PVT1 chr8 128806979 - Exonic hg19 BRCA TCGA-AR-A0U2-01A 167 CDS-5'UTR Intra-chr q24.13 q24.21 77974 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NSMCE2-PVT1 NSMCE2 chr8 126344146 + PVT1 chr8 128808316 - Exonic hg19 BRCA TCGA-AR-A0U2-01A 167 CDS-5'UTR Intra-chr q24.13 q24.21 77975 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC35F3-CCND1 SLC35F3 chr1 234417770 + CCND1 chr11 69469052 - Exonic hg19 BRCA TCGA-A2-A1FX-01A 273 CDS-3'UTR Inter-chr q42.2 q13.3 Oncogene 77976 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ITPK1-ACO1 ITPK1 chr14 93581413 - ACO1 chr9 32405482 + Exonic hg19 BRCA TCGA-BH-A0HY-01A 108 CDS-5'UTR Inter-chr p21.1 Seq+ 77977 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RARA-SKA2 RARA chr17 38465537 + SKA2 chr17 57232183 + Exonic hg19 BRCA TCGA-A2-A0YG-01A 162 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q22 77978 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RARA-PRR11 RARA chr17 38465537 + PRR11 chr17 57247108 + Exonic hg19 BRCA TCGA-A2-A0YG-01A 2775 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 77979 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RARA-SKA2 RARA chr17 38474699 + SKA2 chr17 57232183 + Exonic hg19 BRCA TCGA-A2-A0YG-01A 164 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q22 77980 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RARA-PRR11 RARA chr17 38474699 + PRR11 chr17 57240959 + Exonic hg19 BRCA TCGA-A2-A0YG-01A 2856 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 77981 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RARA-PRR11 RARA chr17 38474699 + PRR11 chr17 57247108 + Exonic hg19 BRCA TCGA-A2-A0YG-01A 2798 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 77982 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RARA-PRR11 RARA chr17 38474699 + PRR11 chr17 57262414 + Exonic hg19 BRCA TCGA-A2-A0YG-01A 595 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 77983 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SREBF2-ACO2 SREBF2 chr22 42229361 + ACO2 chr22 41916174 + Exonic hg19 BRCA TCGA-BH-A0HY-01A 105 CDS-5'UTR Intra-chr q13.2 Transcription factor q13.2 Seq+ 77984 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SREBF2-ACO2 SREBF2 chr22 42229361 + ACO2 chr22 41918833 + Exonic hg19 BRCA TCGA-BH-A0HY-01A 105 CDS-5'UTR Intra-chr q13.2 Transcription factor q13.2 Seq+ 77985 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF37A-PIP5K1B ZNF37A chr10 38385559 + PIP5K1B chr9 71357416 + Exonic hg19 BRCA TCGA-AR-A2LL-01A 157 CDS-5'UTR Inter-chr p11.1 Transcription factor q21.11 Seq+ 77986 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF37A-PIP5K1B ZNF37A chr10 38385559 + PIP5K1B chr9 71433376 + Exonic hg19 BRCA TCGA-AR-A2LL-01A 162 CDS-5'UTR Inter-chr p11.1 Transcription factor q21.11 Seq+ 77987 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MACF1-DAB1 MACF1 chr1 39723699 + DAB1 chr1 58560110 + Exonic hg19 BRCA TCGA-A7-A5ZV-01A 135 CDS-5'UTR Intra-chr p34.3 p32.1 77988 ChimerSeq Tophat-Fusion TCGA_RNA-Seq STMN4-RUNX1 STMN4 chr8 27101317 + RUNX1 chr21 36209242 - Exonic hg19 BRCA TCGA-BH-A18V-06A 184 5'UTR-CDS Inter-chr p21.2 q22.12 Oncogene Tumor suppressor gene Transcription factor 77989 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TRIT1-CHI3L2 TRIT1 chr1 40348989 - CHI3L2 chr1 111770285 + Exonic hg19 BRCA TCGA-XX-A89A-01A 117 CDS-5'UTR Intra-chr p34.2 Tumor suppressor gene p13.2 Seq+ 77990 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNRF3-ASCC2 ZNRF3 chr22 29280053 + ASCC2 chr22 30221245 - Exonic hg19 BRCA TCGA-A8-A094-01A 237 In-Frame Intra-chr q12.1 q12.2 Seq+ 77991 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNRF3-ASCC2 ZNRF3 chr22 29280053 + ASCC2 chr22 30221768 - Exonic hg19 BRCA TCGA-A8-A094-01A 237 In-Frame Intra-chr q12.1 q12.2 Seq+ 77992 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LAPTM4B-DCAF13 LAPTM4B chr8 98863624 - DCAF13 chr8 104427011 + Exonic hg19 BRCA TCGA-AN-A0XV-01A 126 CDS-5'UTR Intra-chr q22.1 q22.3 77993 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-BH-A0HW-01A 119 5'UTR-5'UTR Inter-chr q24.33 q13.33 77994 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LRIG3-PIP4K2C LRIG3 chr12 59304961 - PIP4K2C chr12 57995461 + Exonic hg19 BRCA TCGA-AR-A1AH-01A 182 CDS-3'UTR Intra-chr q14.1 Tumor suppressor gene q13.3 Seq+ 77995 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LRIG3-PIP4K2C LRIG3 chr12 59307762 - PIP4K2C chr12 57995708 + Exonic hg19 BRCA TCGA-AR-A1AH-01A 182 CDS-3'UTR Intra-chr q14.1 Tumor suppressor gene q13.3 Seq+ 77996 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LRIG3-PIP4K2C LRIG3 chr12 59307762 - PIP4K2C chr12 57996753 + Exonic hg19 BRCA TCGA-AR-A1AH-01A 182 CDS-3'UTR Intra-chr q14.1 Tumor suppressor gene q13.3 Seq+ 77997 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26796139 - FOXO1 chr13 41192773 + Exonic hg19 BRCA TCGA-D8-A1X7-01A 109 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 77998 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NEURL2-STAU1 NEURL2 chr20 44519811 - STAU1 chr20 47790731 + Exonic hg19 BRCA TCGA-AR-A0TX-01A 306 5'UTR-5'UTR Intra-chr q13.12 q13.13 77999 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NEURL2-STAU1 NEURL2 chr20 44519811 - STAU1 chr20 47804652 + Exonic hg19 BRCA TCGA-AR-A0TX-01A 206 5'UTR-5'UTR Intra-chr q13.12 q13.13 78000 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CLSTN2-PCOLCE2 CLSTN2 chr3 140285501 + PCOLCE2 chr3 142539886 - Exonic hg19 BRCA TCGA-A2-A0CL-01A 193 3'UTR-CDS Intra-chr q23 q23 Seq+ 78001 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ADM2-SHANK3 ADM2 chr22 50921486 + SHANK3 chr22 51159603 - Exonic hg19 BRCA TCGA-AR-A0TX-01A 253 3'UTR-CDS Intra-chr q13.33 78002 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF461-MATN2 ZNF461 chr19 37155599 - MATN2 chr8 98900302 + Exonic hg19 BRCA TCGA-AC-A5XU-01A 154 CDS-5'UTR Inter-chr q13.12 Transcription factor q22.1 Seq+ 78003 ChimerSeq Tophat-Fusion TCGA_RNA-Seq IQCB1-CACNG4 IQCB1 chr3 121553237 - CACNG4 chr17 65014304 + Exonic hg19 BRCA TCGA-AO-A03L-01A 159 5'UTR-CDS Inter-chr q13.33 q24.2 Seq+ 78004 ChimerSeq Tophat-Fusion TCGA_RNA-Seq POP1-TRPS1 POP1 chr8 99135706 + TRPS1 chr8 116421433 + Exonic hg19 BRCA TCGA-AC-A5XU-01A 175 CDS-3'UTR Intra-chr q22.2 q23.3 Transcription factor 78005 ChimerSeq Tophat-Fusion TCGA_RNA-Seq POP1-TRPS1 POP1 chr8 99135706 + TRPS1 chr8 116423784 + Exonic hg19 BRCA TCGA-AC-A5XU-01A 165 CDS-3'UTR Intra-chr q22.2 q23.3 Transcription factor 78006 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CALD1-LRGUK CALD1 chr7 134464499 + LRGUK chr7 133932307 + Exonic hg19 BRCA TCGA-E9-A244-01A 967 5'UTR-CDS Intra-chr q33 q33 Seq+ 78007 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CALD1-LRGUK CALD1 chr7 134464499 + LRGUK chr7 133933702 + Exonic hg19 BRCA TCGA-E9-A244-01A 1038 5'UTR-CDS Intra-chr q33 q33 Seq+ 78008 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26796139 - FOXO1 chr13 41192773 + Exonic hg19 BRCA TCGA-D8-A1JF-01A 182 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 78009 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RARA-STAT3 RARA chr17 38465537 + STAT3 chr17 40500537 - Exonic hg19 BRCA TCGA-EW-A1J3-01A 108 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 78010 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RARA-STAT3 RARA chr17 38465537 + STAT3 chr17 40500556 - Exonic hg19 BRCA TCGA-EW-A1J3-01A 108 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 78011 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ADAMTS15-FAM65C ADAMTS15 chr11 130319824 + FAM65C chr20 49262234 + Exonic hg19 BRCA TCGA-E2-A14S-01A 646 CDS-5'UTR Inter-chr q24.3 78012 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ADAMTS15-FAM65C ADAMTS15 chr11 130319824 + FAM65C chr20 49270482 + Exonic hg19 BRCA TCGA-E2-A14S-01A 1136 CDS-5'UTR Inter-chr q24.3 78013 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ADAMTS15-FAM65C ADAMTS15 chr11 130319824 + FAM65C chr20 49276402 + Exonic hg19 BRCA TCGA-E2-A14S-01A 617 CDS-5'UTR Inter-chr q24.3 78014 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACLY-CNP ACLY chr17 40057948 - CNP chr17 40129340 - Exonic hg19 BRCA TCGA-LL-A6FR-01A 315 CDS-3'UTR Intra-chr q21.2 q21.2 78015 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PAPD5-SHANK2 PAPD5 chr16 50250105 + SHANK2 chr11 70858377 - Exonic hg19 BRCA TCGA-EW-A1J5-01A 588 CDS-5'UTR Inter-chr q12.1 q13.4 Seq+ 78016 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PAPD5-SHANK2 PAPD5 chr16 50250105 + SHANK2 chr11 70858383 - Exonic hg19 BRCA TCGA-EW-A1J5-01A 588 CDS-5'UTR Inter-chr q12.1 q13.4 Seq+ 78017 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SS18-TAF4B SS18 chr18 23667464 - TAF4B chr18 23970010 - Exonic hg19 BRCA TCGA-A2-A0YM-01A 186 CDS-3'UTR Intra-chr q11.2 q11.2 78018 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-B6-A0RU-01A 139 5'UTR-5'UTR Inter-chr q24.33 q13.33 78019 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HDHD2-SNF8 HDHD2 chr18 44676748 - SNF8 chr17 47014485 - Exonic hg19 BRCA TCGA-BH-A0AW-01A 104 5'UTR-CDS Inter-chr q21.1 q21.32 Seq+ 78020 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GBA-SCAMP3 GBA chr1 155214296 - SCAMP3 chr1 155228744 - Exonic hg19 BRCA TCGA-B6-A0RU-01A 112 5'UTR-CDS Intra-chr Seq+ 78021 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GBA-SCAMP3 GBA chr1 155214296 - SCAMP3 chr1 155230240 - Exonic hg19 BRCA TCGA-B6-A0RU-01A 112 5'UTR-CDS Intra-chr Seq+ 78022 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GBA-SCAMP3 GBA chr1 155214296 - SCAMP3 chr1 155230380 - Exonic hg19 BRCA TCGA-B6-A0RU-01A 112 5'UTR-CDS Intra-chr Seq+ 78023 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26795971 - FOXO1 chr13 41192773 + Exonic hg19 BRCA TCGA-D8-A1XR-01A 125 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 78024 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26796139 - FOXO1 chr13 41192773 + Exonic hg19 BRCA TCGA-D8-A1XR-01A 125 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 78025 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF503-CHSY1 ZNF503 chr10 77118267 - CHSY1 chr15 101775286 + Exonic hg19 BRCA TCGA-AO-A03P-01A 254 3'UTR-CDS Inter-chr q22.2 Transcription factor q26.3 78026 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FRS2-LYZ FRS2 chr12 69925835 + LYZ chr12 69743887 + Exonic hg19 BRCA TCGA-A8-A06Z-01A 3808 5'UTR-CDS Intra-chr q15 q15 Seq+ 78027 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SYNRG-CASC3 SYNRG chr17 35902528 + CASC3 chr17 38296773 + Exonic hg19 BRCA TCGA-A2-A1G1-01A 172 CDS-5'UTR Intra-chr q21.1 78028 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SYNRG-CASC3 SYNRG chr17 35902531 + CASC3 chr17 38296773 + Exonic hg19 BRCA TCGA-A2-A1G1-01A 172 CDS-5'UTR Intra-chr q21.1 78029 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SYNRG-CASC3 SYNRG chr17 35902666 + CASC3 chr17 38296773 + Exonic hg19 BRCA TCGA-A2-A1G1-01A 172 CDS-5'UTR Intra-chr q21.1 78030 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ADAM10-PLAC9 ADAM10 chr15 59041678 - PLAC9 chr10 81901837 + Exonic hg19 BRCA TCGA-C8-A8HP-01A 101 3'UTR-CDS Inter-chr q21.3 q22.3 Seq+ 78031 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ASCC3-PLEKHG1 ASCC3 chr6 101308910 - PLEKHG1 chr6 151031975 - Exonic hg19 BRCA TCGA-E9-A248-01A 172 CDS-5'UTR Intra-chr q16.3 q25.1 78032 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZBTB43-PITPNC1 ZBTB43 chr9 129571193 + PITPNC1 chr17 65528917 + Exonic hg19 BRCA TCGA-BH-A1FM-01A 191 5'UTR-CDS Inter-chr q33.3 Transcription factor q24.2 Seq+ 78033 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LRRFIP2-GOLGA4 LRRFIP2 chr3 37212881 - GOLGA4 chr3 37331395 - Exonic hg19 BRCA TCGA-BH-A1FM-01A 179 5'UTR-CDS Intra-chr p22.2 p22.2 78034 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LRRFIP2-GOLGA4 LRRFIP2 chr3 37216029 - GOLGA4 chr3 37321497 - Exonic hg19 BRCA TCGA-BH-A1FM-01A 183 5'UTR-CDS Intra-chr p22.2 p22.2 78035 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26796139 - FOXO1 chr13 41192773 + Exonic hg19 BRCA TCGA-EW-A1J1-01A 120 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 78036 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ITGB8-DEC1 ITGB8 chr7 20444475 + 2001_ 12_ 1_ chr9 118016671 - Exonic hg19 BRCA TCGA-AO-A0J6-01A 159 CDS-5'UTR Inter-chr p21.1 78037 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NFKBIZ-LOC152225 NFKBIZ chr3 101578181 + LOC152225 chr3 101669400 - Exonic hg19 BRCA TCGA-AR-A24Z-01A 2563 CDS-5'UTR Intra-chr q12.3 Seq+ 78038 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23748643 - APOO chrX 23851626 - Exonic hg19 BRCA TCGA-A7-A13D-01A 173 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 78039 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23748643 - APOO chrX 23851728 - Exonic hg19 BRCA TCGA-A7-A13D-01A 173 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 78040 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23761241 - APOO chrX 23851626 - Exonic hg19 BRCA TCGA-A7-A13D-01A 155 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 78041 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23761241 - APOO chrX 23851728 - Exonic hg19 BRCA TCGA-A7-A13D-01A 155 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 78042 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ARID1A-YTHDF2 ARID1A chr1 27059282 + YTHDF2 chr1 29063558 + Exonic hg19 BRCA TCGA-E2-A14T-01A 184 CDS-5'UTR Intra-chr p36.11 Oncogene Tumor suppressor gene p35.3 Seq+ 78043 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TTC39A-CRISP1 TTC39A chr1 51760062 - CRISP1 chr6 49825114 - Exonic hg19 BRCA TCGA-BH-A209-01A 550 CDS-5'UTR Inter-chr p32.3 p12.3 Seq+ 78044 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TTC39A-CRISP1 TTC39A chr1 51760062 - CRISP1 chr6 49834272 - Exonic hg19 BRCA TCGA-BH-A209-01A 325 CDS-5'UTR Inter-chr p32.3 p12.3 Seq+ 78045 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HNRNPUL2-SHANK2 HNRNPUL2 chr11 62491058 - SHANK2 chr11 70861925 - Exonic hg19 BRCA TCGA-A2-A1G4-01A 486 CDS-5'UTR Intra-chr q12.3 q13.4 78046 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HNRNPUL2-SHANK2 HNRNPUL2 chr11 62491058 - SHANK2 chr11 70877032 - Exonic hg19 BRCA TCGA-A2-A1G4-01A 140 CDS-5'UTR Intra-chr q12.3 q13.4 78047 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MARK2-GLYATL2 MARK2 chr11 63607031 + GLYATL2 chr11 58611996 - Exonic hg19 BRCA TCGA-A2-A1G4-01A 426 5'UTR-5'UTR Intra-chr q13.1 CAMK:CAMKL q12.1 Seq+ 78048 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402500 - RPS11 chr19 50001192 + Exonic hg19 BRCA TCGA-A2-A04U-01A 103 5'UTR-5'UTR Inter-chr q24.33 q13.33 78049 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPRD1A-SLC39A6 RPRD1A chr18 33647216 - SLC39A6 chr18 33706978 - Exonic hg19 BRCA TCGA-A8-A07G-01A 122 CDS-5'UTR Intra-chr q12.2 q12.2 Seq+ 78050 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLFN12-PSMD3 SLFN12 chr17 33757518 - PSMD3 chr17 38151445 + Exonic hg19 BRCA TCGA-AR-A1AT-01A 114 5'UTR-CDS Intra-chr q12 q21.1 Seq+ 78051 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SERPINE1-IGF1R SERPINE1 chr7 100781524 + IGF1R chr15 99374788 - Exonic hg19 BRCA TCGA-B6-A0IO-01A 8286 3'UTR-CDS Inter-chr q22.1 q26.3 TK:InsR Oncogene 78052 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PLEKHA1-FAM187B PLEKHA1 chr10 124134321 + FAM187B chr19 35716114 - Exonic hg19 BRCA TCGA-AO-A03V-01A 322 5'UTR-CDS Inter-chr q26.13 q13.12 Seq+ 78053 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PLEKHA1-FAM187B PLEKHA1 chr10 124135066 + FAM187B chr19 35716115 - Exonic hg19 BRCA TCGA-AO-A03V-01A 322 5'UTR-CDS Inter-chr q26.13 q13.12 Seq+ 78054 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PLEKHA1-FAM187B PLEKHA1 chr10 124135073 + FAM187B chr19 35716115 - Exonic hg19 BRCA TCGA-AO-A03V-01A 322 5'UTR-CDS Inter-chr q26.13 q13.12 Seq+ 78055 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ILF3-SLC44A2 ILF3 chr19 10765162 + SLC44A2 chr19 10736928 + Exonic hg19 BRCA TCGA-AO-A124-01A 112 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 78056 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ITGB6-BAZ2B ITGB6 chr2 160964189 - BAZ2B chr2 160335231 - Exonic hg19 BRCA TCGA-C8-A26W-01A 218 CDS-5'UTR Intra-chr q24.2 q24.2 Transcription factor Seq+ 78057 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KDM5A-ADIPOR2 KDM5A chr12 427271 - ADIPOR2 chr12 1837017 - Exonic hg19 BRCA TCGA-AQ-A54N-01A 113 CDS-5'UTR Intra-chr p13.33 Tumor suppressor gene p13.33 78058 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0586-HSBP1 KIAA0586 chr14 58930891 + HSBP1 chr16 83845046 + Exonic hg19 BRCA TCGA-AQ-A54N-01A 110 CDS-3'UTR Inter-chr q23.1 q23.3 78059 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RARA-HOXB3 RARA chr17 38510568 + HOXB3 chr17 46643200 + Exonic hg19 BRCA TCGA-AO-A12D-01A 649 CDS-5'UTR Intra-chr q21.2 Oncogene Transcription factor q21.32 Transcription factor Seq+ 78060 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DSTN-PPP1R16B DSTN chr20 17585275 + PPP1R16B chr20 37455233 - Exonic hg19 BRCA TCGA-AO-A03M-01B 489 CDS-5'UTR Intra-chr p12.1 q11.23 78061 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CBX3-GARS CBX3 chr7 26241445 + GARS chr7 30665849 + Exonic hg19 BRCA TCGA-A2-A0CW-01A 713 5'UTR-CDS Intra-chr p15.2 p14.3 Seq+ 78062 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26796139 - FOXO1 chr13 41192773 + Exonic hg19 BRCA TCGA-D8-A1X9-01A 115 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 78063 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRPF19-RAB1B PRPF19 chr11 60658574 - RAB1B chr11 66043974 + Exonic hg19 BRCA TCGA-A8-A06N-01A 470 3'UTR-3'UTR Intra-chr q12.2 q13.2 Seq+ 78064 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTTN-FOLR1 CTTN chr11 70244719 + FOLR1 chr11 71900708 + Exonic hg19 BRCA TCGA-E9-A228-01A 539 5'UTR-5'UTR Intra-chr q13.3 q13.4 Seq+ 78065 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTTN-FOLR1 CTTN chr11 70244719 + FOLR1 chr11 71901619 + Exonic hg19 BRCA TCGA-E9-A228-01A 539 5'UTR-5'UTR Intra-chr q13.3 q13.4 Seq+ 78066 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTTN-FOLR1 CTTN chr11 70244719 + FOLR1 chr11 71903209 + Exonic hg19 BRCA TCGA-E9-A228-01A 539 5'UTR-5'UTR Intra-chr q13.3 q13.4 Seq+ 78067 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTTN-FOLR1 CTTN chr11 70244719 + FOLR1 chr11 71906314 + Exonic hg19 BRCA TCGA-E9-A228-01A 539 5'UTR-CDS Intra-chr q13.3 q13.4 Seq+ 78068 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTTN-NUMA1 CTTN chr11 70250418 + NUMA1 chr11 71790740 + Exonic hg19 BRCA TCGA-E9-A228-01A 131 5'UTR-5'UTR Intra-chr q13.3 q13.4 Oncogene 78069 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPL7L1-CUL7 RPL7L1 chr6 42854207 + CUL7 chr6 43010795 + Exonic hg19 BRCA TCGA-A2-A3XX-01A 308 3'UTR-CDS Intra-chr p21.1 p21.1 78070 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LRTOMT-FOLR1 LRTOMT chr11 71791930 + FOLR1 chr11 71900708 + Exonic hg19 BRCA TCGA-E9-A228-01A 237 5'UTR-5'UTR Intra-chr q13.4 q13.4 Seq+ 78071 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LRTOMT-FOLR1 LRTOMT chr11 71791930 + FOLR1 chr11 71903209 + Exonic hg19 BRCA TCGA-E9-A228-01A 237 5'UTR-5'UTR Intra-chr q13.4 q13.4 Seq+ 78072 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ULK4-ATP6V0E1 ULK4 chr3 41900797 - ATP6V0E1 chr5 172447336 + Exonic hg19 BRCA TCGA-A8-A06N-01A 105 CDS-3'UTR Inter-chr p22.1 Other:ULK q35.1 78073 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPS3-SLC6A15 RPS3 chr11 75115911 + SLC6A15 chr12 85282559 + Exonic hg19 BRCA TCGA-A8-A0A9-01A 246 3'UTR-CDS Inter-chr q13.4 q21.31 78074 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPS3-SLC6A15 RPS3 chr11 75115911 + SLC6A15 chr12 85282793 + Exonic hg19 BRCA TCGA-A8-A0A9-01A 246 3'UTR-CDS Inter-chr q13.4 q21.31 78075 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TRAF4-GIP TRAF4 chr17 27072197 - GIP chr17 47044614 - Exonic hg19 BRCA TCGA-C8-A275-01A 133 CDS-5'UTR Intra-chr q11.2 q21.32 78076 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TRDN-FIG4 TRDN chr6 123538550 - FIG4 chr6 110121596 + Exonic hg19 BRCA TCGA-BH-A203-01A 271 3'UTR-CDS Intra-chr q22.31 q21 78077 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CYFIP1-UBE3A CYFIP1 chr15 22934953 + UBE3A chr15 25663929 + Exonic hg19 BRCA TCGA-A7-A26F-01A 128 5'UTR-5'UTR Intra-chr q11.2 q11.2 78078 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A2-A0CT-01A 103 5'UTR-5'UTR Inter-chr q24.33 q13.33 78079 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26796139 - FOXO1 chr13 41192773 + Exonic hg19 BRCA TCGA-A7-A13G-01A 105 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 78080 ChimerSeq Tophat-Fusion TCGA_RNA-Seq XBP1-ZNRF3 XBP1 chr22 29195044 - ZNRF3 chr22 29360548 - Exonic hg19 BRCA TCGA-E9-A3Q9-01A 965 In-Frame Intra-chr q12.1 Transcription factor q12.1 78081 ChimerSeq Tophat-Fusion TCGA_RNA-Seq XBP1-ZNRF3 XBP1 chr22 29195044 - ZNRF3 chr22 29363594 - Exonic hg19 BRCA TCGA-E9-A3Q9-01A 963 Out-of-Frame Intra-chr q12.1 Transcription factor q12.1 78082 ChimerSeq Tophat-Fusion TCGA_RNA-Seq XBP1-ZNRF3 XBP1 chr22 29195044 - ZNRF3 chr22 29376905 - Exonic hg19 BRCA TCGA-E9-A3Q9-01A 1042 Out-of-Frame Intra-chr q12.1 Transcription factor q12.1 78083 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23748643 - APOO chrX 23851626 - Exonic hg19 BRCA TCGA-A7-A13D-01A 665 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 78084 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23748643 - APOO chrX 23851728 - Exonic hg19 BRCA TCGA-A7-A13D-01A 665 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 78085 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23761241 - APOO chrX 23851626 - Exonic hg19 BRCA TCGA-A7-A13D-01A 537 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 78086 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23761241 - APOO chrX 23851728 - Exonic hg19 BRCA TCGA-A7-A13D-01A 537 CDS-3'UTR Intra-chr p22.11 p22.11 Seq+ 78087 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LSM1-ZMAT4 LSM1 chr8 38027319 - ZMAT4 chr8 40695251 + Exonic hg19 BRCA TCGA-A2-A0EX-01A 156 CDS-5'UTR Intra-chr p11.23 p11.21 Transcription factor 78088 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LSM1-ZMAT4 LSM1 chr8 38027319 - ZMAT4 chr8 40696600 + Exonic hg19 BRCA TCGA-A2-A0EX-01A 156 CDS-5'UTR Intra-chr p11.23 p11.21 Transcription factor 78089 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LSM1-ZMAT4 LSM1 chr8 38029482 - ZMAT4 chr8 40696600 + Exonic hg19 BRCA TCGA-A2-A0EX-01A 156 CDS-5'UTR Intra-chr p11.23 p11.21 Transcription factor 78090 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UNC13D-SRP68 UNC13D chr17 73829046 - SRP68 chr17 74035422 - Exonic hg19 BRCA TCGA-A7-A13D-01A 283 CDS-3'UTR Intra-chr q25.1 q25.1 Seq+ 78091 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BEND6-MED21 BEND6 chr6 56825015 + MED21 chr12 27182639 - Exonic hg19 BRCA TCGA-A8-A06R-01A 112 5'UTR-3'UTR Inter-chr p12.1 p11.23 78092 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26796139 - FOXO1 chr13 41192773 + Exonic hg19 BRCA TCGA-A8-A06R-01A 259 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 78093 ChimerSeq Tophat-Fusion TCGA_RNA-Seq REEP5-XBP1 REEP5 chr5 112221796 + XBP1 chr22 29190751 - Exonic hg19 BRCA TCGA-BH-A0HA-01A 100 CDS-3'UTR Inter-chr q22.2 q12.1 Transcription factor 78094 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RARA-PCTP RARA chr17 38465537 + PCTP chr17 53848466 + Exonic hg19 BRCA TCGA-A2-A0D4-01A 102 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 78095 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RARA-PCTP RARA chr17 38474699 + PCTP chr17 53848466 + Exonic hg19 BRCA TCGA-A2-A0D4-01A 102 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 78096 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NCOA3-PRIM2 NCOA3 chr20 46212004 + PRIM2 chr6 57372287 + Exonic hg19 BRCA TCGA-E9-A1RH-01A 203 5'UTR-CDS Inter-chr q13.12 Transcription factor p11.2 Seq+ 78097 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DDX5-ART1 DDX5 chr17 62499547 - ART1 chr11 3685524 + Exonic hg19 BRCA TCGA-E9-A1RH-01A 223 CDS-3'UTR Inter-chr q23.3 p15.4 Tumor suppressor gene Seq+ 78098 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CDC42SE1-TNKS CDC42SE1 chr1 151031954 - TNKS chr8 9619025 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 124 5'UTR-CDS Inter-chr q21.3 p23.1 Seq+ 78099 ChimerSeq Tophat-Fusion TCGA_RNA-Seq STK35-SRGAP2 STK35 chr20 2128570 + SRGAP2 chr1 206571885 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 212 3'UTR-CDS Inter-chr p13 q32.1 Tumor suppressor gene 78100 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DHX9-KDM5B DHX9 chr1 182809245 + KDM5B chr1 202745982 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 151 5'UTR-CDS Intra-chr q25.3 q32.1 Transcription factor 78101 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NUMA1-AATF NUMA1 chr11 71780887 - AATF chr17 35343915 + Exonic hg19 BRCA TCGA-A8-A08S-01A 205 5'UTR-CDS Inter-chr q13.4 Oncogene Seq+ 78102 ChimerSeq Tophat-Fusion TCGA_RNA-Seq VAV3-CDH1 VAV3 chr1 108292354 - CDH1 chr16 68867653 - Exonic hg19 BRCA TCGA-AR-A1AS-01A 406 CDS-3'UTR Inter-chr p13.3 q22.1 Oncogene Tumor suppressor gene 78103 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TNPO2-NFIX TNPO2 chr19 12816053 - NFIX chr19 13208090 - Exonic hg19 BRCA TCGA-C8-A26X-01A 112 CDS-3'UTR Intra-chr p13.13 p13.13 Transcription factor Seq+ 78104 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NRIP1-HIBADH NRIP1 chr21 16363521 - HIBADH chr7 27570966 - Exonic hg19 BRCA TCGA-AN-A0FZ-01A 407 5'UTR-CDS Inter-chr q21.1 p15.2 Seq+ 78105 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NRIP1-HIBADH NRIP1 chr21 16386664 - HIBADH chr7 27570966 - Exonic hg19 BRCA TCGA-AN-A0FZ-01A 832 5'UTR-CDS Inter-chr q21.1 p15.2 Seq+ 78106 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NRIP1-HIBADH NRIP1 chr21 16415815 - HIBADH chr7 27570966 - Exonic hg19 BRCA TCGA-AN-A0FZ-01A 442 5'UTR-CDS Inter-chr q21.1 p15.2 Seq+ 78107 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CPSF6-MDM1 CPSF6 chr12 69656341 + MDM1 chr12 68689145 - Exonic hg19 BRCA TCGA-AN-A0FZ-01A 177 3'UTR-3'UTR Intra-chr q15 q15 Seq+ 78108 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CPSF6-MDM1 CPSF6 chr12 69656341 + MDM1 chr12 68690761 - Exonic hg19 BRCA TCGA-AN-A0FZ-01A 177 3'UTR-3'UTR Intra-chr q15 q15 Seq+ 78109 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FRS2-MDM1 FRS2 chr12 69925835 + MDM1 chr12 68725000 - Exonic hg19 BRCA TCGA-AN-A0FZ-01A 129 5'UTR-CDS Intra-chr q15 q15 Seq+ 78110 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26796139 - FOXO1 chr13 41192773 + Exonic hg19 BRCA TCGA-A2-A25C-01A 219 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 78111 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26796139 - FOXO1 chr13 41192773 + Exonic hg19 BRCA TCGA-AN-A0FZ-01A 163 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 78112 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SPATS2-FGFR1OP2 SPATS2 chr12 49783433 + FGFR1OP2 chr12 27107152 + Exonic hg19 BRCA TCGA-AN-A0XU-01A 127 5'UTR-CDS Intra-chr q13.12 p11.23 78113 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CSMD3-ST3GAL1 CSMD3 chr8 113821422 - ST3GAL1 chr8 134558016 + Exonic hg19 BRCA TCGA-E2-A1LG-01A 100 CDS-5'UTR Intra-chr q23.3 Oncogene q24.22 78114 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TFAP2A-GCNT2 TFAP2A chr6 10400983 - GCNT2 chr6 10529073 - Exonic hg19 BRCA TCGA-C8-A12K-01A 124 CDS-5'UTR Intra-chr p24.3 Tumor suppressor gene Transcription factor p24.3 78115 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ESRP1-NCALD ESRP1 chr8 95677423 + NCALD chr8 102882756 + Exonic hg19 BRCA TCGA-E2-A14X-01A 199 CDS-5'UTR Intra-chr q22.1 Tumor suppressor gene q22.3 78116 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ESRP1-NCALD ESRP1 chr8 95677423 + NCALD chr8 102887404 + Exonic hg19 BRCA TCGA-E2-A14X-01A 199 CDS-5'UTR Intra-chr q22.1 Tumor suppressor gene q22.3 78117 ChimerSeq Tophat-Fusion TCGA_RNA-Seq QSOX1-FLJ23867 QSOX1 chr1 180166931 - FLJ23867 chr1 180167257 + Exonic hg19 BRCA TCGA-A8-A07B-01A 100 3'UTR-5'UTR Intra-chr q25.2 78118 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AMFR-ITGAM AMFR chr16 56419830 - ITGAM chr16 31332561 + Exonic hg19 BRCA TCGA-D8-A27W-01A 120 5'UTR-CDS Intra-chr q13 p11.2 Seq+ 78119 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MED1-PIP5K1C MED1 chr17 37561732 - PIP5K1C chr19 3660963 + Exonic hg19 BRCA TCGA-A2-A0EY-01A 593 3'UTR-CDS Inter-chr q12 Tumor suppressor gene p13.3 78120 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SEC31A-MUC7 SEC31A chr4 83778104 - MUC7 chr4 71337931 + Exonic hg19 BRCA TCGA-A8-A09A-01A 126 CDS-5'UTR Intra-chr q21.22 q13.3 Seq+ 78121 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RBBP5-DOK5 RBBP5 chr1 205057107 - DOK5 chr20 53257752 + Exonic hg19 BRCA TCGA-AN-A0FT-01A 112 3'UTR-CDS Inter-chr q32.1 q13.2 78122 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CCND1-SLCO2B1 CCND1 chr11 69468588 + SLCO2B1 chr11 74903519 - Exonic hg19 BRCA TCGA-Z7-A8R6-01A 232 3'UTR-CDS Intra-chr q13.3 Oncogene q13.4 78123 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTCF-NUTF2 CTCF chr16 67605166 + NUTF2 chr16 67899004 + Exonic hg19 BRCA TCGA-A2-A3XY-01A 111 5'UTR-5'UTR Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 Seq+ 78124 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26796139 - FOXO1 chr13 41192773 + Exonic hg19 BRCA TCGA-AR-A24R-01A 140 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 78125 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26796139 - FOXO1 chr13 41192773 + Exonic hg19 BRCA TCGA-C8-A27B-01A 130 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 78126 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANO1-RSF1 ANO1 chr11 70034728 + RSF1 chr11 77475642 + Exonic hg19 BRCA TCGA-E9-A247-01A 193 5'UTR-CDS Intra-chr q13.3 q14.1 78127 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MYC-PVT1 MYC chr8 128753382 + PVT1 chr8 128894556 + Exonic hg19 BRCA TCGA-AR-A2LR-01A 491 3'UTR-5'UTR Intra-chr q24.21 Oncogene Transcription factor q24.21 Seq+ 78128 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RARA-TSPYL4 RARA chr17 38487647 + TSPYL4 chr6 116571580 - Exonic hg19 BRCA TCGA-EW-A6S9-01A 155 CDS-3'UTR Inter-chr q21.2 Oncogene Transcription factor q22.1 Seq+ 78129 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SYNCRIP-CDK19 SYNCRIP chr6 86352514 - CDK19 chr6 111067403 - Exonic hg19 BRCA TCGA-E2-A14V-01A 102 5'UTR-CDS Intra-chr q14.3 q21 Seq+ 78130 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF703-ADAM32 ZNF703 chr8 37556515 + ADAM32 chr8 39129223 + Exonic hg19 BRCA TCGA-A8-A09K-01A 757 3'UTR-CDS Intra-chr p11.23 Transcription factor 78131 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CNTN5-TMEM123 CNTN5 chr11 99296635 + TMEM123 chr11 102319542 + Exonic hg19 BRCA TCGA-AO-A0JD-01A 181 5'UTR-CDS Intra-chr q22.1 q22.2 78132 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CNTN5-TMEM123 CNTN5 chr11 99296638 + TMEM123 chr11 102319542 + Exonic hg19 BRCA TCGA-AO-A0JD-01A 181 5'UTR-CDS Intra-chr q22.1 q22.2 78133 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402501 - RPS11 chr19 50001193 + Exonic hg19 BRCA TCGA-BH-A42V-01A 152 5'UTR-5'UTR Inter-chr q24.33 q13.33 78134 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMEM123-CNTN5 TMEM123 chr11 102268049 - CNTN5 chr11 99414250 + Exonic hg19 BRCA TCGA-AO-A0JD-01A 133 3'UTR-5'UTR Intra-chr q22.2 q22.1 Seq+ 78135 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKAP1-PITPNC1 AKAP1 chr17 55162758 + PITPNC1 chr17 65574301 + Exonic hg19 BRCA TCGA-E2-A14V-01A 121 5'UTR-CDS Intra-chr q22 q24.2 Seq+ 78136 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-AR-A24O-01A 123 5'UTR-5'UTR Inter-chr q24.33 q13.33 78137 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A2-A3Y0-01A 198 5'UTR-5'UTR Inter-chr q24.33 q13.33 78138 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AN-A04C-01A 129 5'UTR-5'UTR Inter-chr q24.33 q13.33 78139 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TET3-ACTG2 TET3 chr2 74230292 + ACTG2 chr2 74135799 + Exonic hg19 BRCA TCGA-B6-A3ZX-01A 109 5'UTR-CDS Intra-chr p13.1 Transcription factor p13.1 Seq+ 78140 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTPRK-LOC100287632 PTPRK chr6 128540066 - LOC100287632 chr6 119103874 + Exonic hg19 BRCA TCGA-BH-A0BR-01A 358 CDS-5'UTR Intra-chr Tumor suppressor gene 78141 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NCOA5-KCNJ6 NCOA5 chr20 44714272 - KCNJ6 chr21 39135827 + Exonic hg19 BRCA TCGA-AR-A256-01A 222 5'UTR-CDS Inter-chr q13.12 Tumor suppressor gene q22.13 78142 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CDH1-DEXI CDH1 chr16 68842750 + DEXI chr16 11023415 - Exonic hg19 BRCA TCGA-B6-A0RN-01A 373 CDS-3'UTR Intra-chr q22.1 Oncogene Tumor suppressor gene p13.13 Seq+ 78143 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC16A9-ADK SLC16A9 chr10 61469236 - ADK chr10 76468078 + Exonic hg19 BRCA TCGA-AR-A24L-01A 160 5'UTR-CDS Intra-chr q21.2 q22.2 Seq+ 78144 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RARA-SKAP1 RARA chr17 38487647 + SKAP1 chr17 46211177 - Exonic hg19 BRCA TCGA-B6-A0IN-01A 283 CDS-3'UTR Intra-chr q21.2 Oncogene Transcription factor q21.32 Seq+ 78145 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-B6-A0IN-01A 188 5'UTR-5'UTR Inter-chr q24.33 q13.33 78146 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EXT2-LRRC4C EXT2 chr11 44135850 + LRRC4C chr11 41437595 - Exonic hg19 BRCA TCGA-EW-A3U0-01A 113 CDS-5'UTR Intra-chr p11.2 Oncogene Tumor suppressor gene p12 78147 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PLIN2-CA10 PLIN2 chr9 19123423 - CA10 chr17 49860413 - Exonic hg19 BRCA TCGA-D8-A1JA-01A 715 5'UTR-CDS Inter-chr p22.1 q22 Seq+ 78148 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PLIN2-CA10 PLIN2 chr9 19123562 - CA10 chr17 49858982 - Exonic hg19 BRCA TCGA-D8-A1JA-01A 715 5'UTR-CDS Inter-chr p22.1 q22 Seq+ 78149 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RCAN3-PHC2 RCAN3 chr1 24831475 + PHC2 chr1 33794470 + Exonic hg19 BRCA TCGA-E9-A3QA-01A 484 5'UTR-CDS Intra-chr p36.11 p35.1 78150 ChimerSeq Tophat-Fusion TCGA_RNA-Seq IQCB1-SEC61A1 IQCB1 chr3 121541814 - SEC61A1 chr3 127788954 - Exonic hg19 BRCA TCGA-C8-A134-01A 222 CDS-3'UTR Intra-chr q13.33 q21.3 78151 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RRM1-PPFIBP2 RRM1 chr11 4116260 + PPFIBP2 chr11 7647039 - Exonic hg19 BRCA TCGA-A8-A08G-01A 122 3'UTR-CDS Intra-chr p15.4 Oncogene p15.4 78152 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TANC2-STRADA TANC2 chr17 61086986 + STRADA chr17 61805772 - Exonic hg19 BRCA TCGA-A1-A0SN-01A 213 CDS-5'UTR Intra-chr q23.2 q23.3 Tumor suppressor gene Seq+ 78153 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RARA-MSL1 RARA chr17 38487647 + MSL1 chr17 38282435 + Exonic hg19 BRCA TCGA-AR-A254-01A 173 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor q21.1 Seq+ 78154 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPS6KB1-TEX2 RPS6KB1 chr17 57990164 + TEX2 chr17 62291601 - Exonic hg19 BRCA TCGA-A1-A0SN-01A 113 CDS-5'UTR Intra-chr q23.1 Oncogene q23.3 Seq+ 78155 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CUL3-IRS1 CUL3 chr2 225422375 - IRS1 chr2 227600965 - Exonic hg19 BRCA TCGA-E9-A1NE-01A 234 CDS-3'UTR Intra-chr q36.2 q36.3 Seq+ 78156 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26796139 - FOXO1 chr13 41192773 + Exonic hg19 BRCA TCGA-GI-A2C9-11A 132 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 78157 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-AN-A0FS-01A 142 5'UTR-5'UTR Inter-chr q24.33 q13.33 78158 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BANP-RRN3P2 BANP chr16 88008790 + RRN3P2 chr16 29124370 + Exonic hg19 BRCA TCGA-E2-A150-01A 105 CDS-5'UTR Intra-chr q24.2 Tumor suppressor gene p11.2 78159 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NUP62-KCNQ2 NUP62 chr19 50430950 - KCNQ2 chr20 62076716 - Exonic hg19 BRCA TCGA-A2-A3XW-01A 200 5'UTR-CDS Inter-chr q13.33 Seq+ 78160 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TLE3-AGBL1 TLE3 chr15 70341239 + AGBL1 chr15 87271587 + Exonic hg19 BRCA TCGA-AO-A1KQ-01A 103 3'UTR-CDS Intra-chr q23 q25.3 78161 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DHCR24-ARHGAP10 DHCR24 chr1 55317875 - ARHGAP10 chr4 148951999 - Exonic hg19 BRCA TCGA-E9-A1NI-01A 106 3'UTR-CDS Inter-chr p32.3 q31.23 78162 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DHCR24-ARHGAP10 DHCR24 chr1 55317875 - ARHGAP10 chr4 148958076 - Exonic hg19 BRCA TCGA-E9-A1NI-01A 106 3'UTR-CDS Inter-chr p32.3 q31.23 78163 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DNAJC21-PRLR DNAJC21 chr5 34945907 + PRLR chr5 35209300 - Exonic hg19 BRCA TCGA-D8-A13Z-01A 121 CDS-5'UTR Intra-chr p13.2 p13.2 78164 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26796139 - FOXO1 chr13 41192773 + Exonic hg19 BRCA TCGA-AO-A1KQ-01A 144 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 78165 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PUM1-OTUD7B PUM1 chr1 31413997 - OTUD7B chr1 149968749 + Exonic hg19 BRCA TCGA-A1-A0SM-01A 369 CDS-5'UTR Intra-chr p35.2 q21.2 78166 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PUM1-OTUD7B PUM1 chr1 31413997 - OTUD7B chr1 149969757 + Exonic hg19 BRCA TCGA-A1-A0SM-01A 369 CDS-5'UTR Intra-chr p35.2 q21.2 78167 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PUM1-OTUD7B PUM1 chr1 31413997 - OTUD7B chr1 149977654 + Exonic hg19 BRCA TCGA-A1-A0SM-01A 354 CDS-5'UTR Intra-chr p35.2 q21.2 78168 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COL4A5-AMMECR1 COL4A5 chrX 107683435 + AMMECR1 chrX 109662229 + Exonic hg19 BRCA TCGA-A8-A085-01A 199 CDS-5'UTR Intra-chr q22.3 q23 78169 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COL4A5-RGAG1 COL4A5 chrX 107683435 + RGAG1 chrX 109688380 + Exonic hg19 BRCA TCGA-A8-A085-01A 409 CDS-5'UTR Intra-chr q22.3 Seq+ 78170 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COL4A5-RGAG1 COL4A5 chrX 107683435 + RGAG1 chrX 109693794 + Exonic hg19 BRCA TCGA-A8-A085-01A 409 CDS-5'UTR Intra-chr q22.3 Seq+ 78171 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LNPEP-PART1 LNPEP chr5 96339249 + PART1 chr5 59811453 + Exonic hg19 BRCA TCGA-D8-A27R-01A 1015 CDS-5'UTR Intra-chr q15 q12.1 Seq+ 78172 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-B6-A0RE-01A 137 5'UTR-5'UTR Inter-chr q24.33 q13.33 78173 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26796139 - FOXO1 chr13 41192773 + Exonic hg19 BRCA TCGA-AR-A250-01A 149 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 78174 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PVT1-SLC30A8 PVT1 chr8 128806979 + SLC30A8 chr8 118165182 + Exonic hg19 BRCA TCGA-BH-A18L-01A 1332 5'UTR-CDS Intra-chr q24.21 q24.11 Seq+ 78175 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PVT1-SLC30A8 PVT1 chr8 128806979 + SLC30A8 chr8 118169929 + Exonic hg19 BRCA TCGA-BH-A18L-01A 1340 5'UTR-CDS Intra-chr q24.21 q24.11 Seq+ 78176 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PBX1-LOC400794 PBX1 chr1 164532547 + LOC400794 chr1 165532741 + Exonic hg19 BRCA TCGA-GI-A2C8-01A 110 CDS-3'UTR Intra-chr q23.3 Oncogene Transcription factor 78177 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MYH9-FOXRED2 MYH9 chr22 36783851 - FOXRED2 chr22 36886313 - Exonic hg19 BRCA TCGA-A7-A4SE-01A 529 5'UTR-CDS Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Seq+ 78178 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PACSIN2-CYB5R3 PACSIN2 chr22 43411026 - CYB5R3 chr22 43032851 - Exonic hg19 BRCA TCGA-OL-A66I-01A 157 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 78179 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-BH-A202-01A 107 5'UTR-5'UTR Inter-chr q24.33 q13.33 78180 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANKLE2-CHFR ANKLE2 chr12 133322337 - CHFR chr12 133417876 - Exonic hg19 BRCA TCGA-AO-A0J2-01A 141 CDS-3'UTR Intra-chr q24.33 q24.33 Tumor suppressor gene Seq+ 78181 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ATG2A-NRXN2 ATG2A chr11 64669433 - NRXN2 chr11 64481414 - Exonic hg19 BRCA TCGA-EW-A1IW-01A 192 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 78182 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ATG2A-NRXN2 ATG2A chr11 64669731 - NRXN2 chr11 64481414 - Exonic hg19 BRCA TCGA-EW-A1IW-01A 192 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 78183 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H3F3B-TRIM47 H3F3B chr17 73774186 - TRIM47 chr17 73874584 - Exonic hg19 BRCA TCGA-LL-A5YM-01A 311 3'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 78184 ChimerSeq Tophat-Fusion TCGA_RNA-Seq VANGL1-EXOC2 VANGL1 chr1 116187817 + EXOC2 chr6 592468 + Exonic hg19 BRCA TCGA-E2-A2P6-01A 410 5'UTR-CDS Inter-chr p13.1 p25.3 78185 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PMEPA1-TTC3 PMEPA1 chr20 56250958 - TTC3 chr21 38445662 - Exonic hg19 BRCA TCGA-BH-A1FE-01A 157 5'UTR-5'UTR Inter-chr q13.31 q22.13 78186 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PMEPA1-TTC3 PMEPA1 chr20 56250959 - TTC3 chr21 38445772 - Exonic hg19 BRCA TCGA-BH-A1FE-01A 157 5'UTR-5'UTR Inter-chr q13.31 q22.13 78187 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TGIF2-NDRG3 TGIF2 chr20 35202054 + NDRG3 chr20 35299799 - Exonic hg19 BRCA TCGA-LL-A441-01A 250 5'UTR-CDS Intra-chr q11.23 Transcription factor q11.23 Seq+ 78188 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TGIF2-NDRG3 TGIF2 chr20 35202147 + NDRG3 chr20 35299799 - Exonic hg19 BRCA TCGA-LL-A441-01A 250 5'UTR-CDS Intra-chr q11.23 Transcription factor q11.23 Seq+ 78189 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TGIF2-NDRG3 TGIF2 chr20 35203037 + NDRG3 chr20 35299799 - Exonic hg19 BRCA TCGA-LL-A441-01A 250 5'UTR-CDS Intra-chr q11.23 Transcription factor q11.23 Seq+ 78190 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SEC61B-SIT1 SEC61B chr9 101984924 + SIT1 chr9 35650943 - Exonic hg19 BRCA TCGA-D8-A1J9-01A 174 CDS-5'UTR Intra-chr q22.33 p13.3 Seq+ 78191 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF292-CGA ZNF292 chr6 87865477 + CGA chr6 87797923 - Exonic hg19 BRCA TCGA-D8-A1JK-01A 118 CDS-5'UTR Intra-chr q14.3 Tumor suppressor gene Transcription factor q14.3 Seq+ 78192 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ABHD2-VAPA ABHD2 chr15 89744637 + VAPA chr18 9950481 - Exonic hg19 BRCA TCGA-AN-A0FD-01A 119 3'UTR-CDS Inter-chr q26.1 p11.22 Seq+ 78193 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DKFZP586I1420-PSMC5 DKFZP586I1420 chr7 30411855 + PSMC5 chr17 61908377 + Exonic hg19 BRCA TCGA-AC-A62V-01A 143 5'UTR-CDS Inter-chr q23.3 78194 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UVRAG-PAK1 UVRAG chr11 75623082 + PAK1 chr11 77153453 + Exonic hg19 BRCA TCGA-AO-A1KT-01A 172 CDS-5'UTR Intra-chr q13.5 Tumor suppressor gene q14.1 STE:STE20 Seq+ 78195 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UVRAG-PAK1 UVRAG chr11 75623082 + PAK1 chr11 77153457 + Exonic hg19 BRCA TCGA-AO-A1KT-01A 172 CDS-5'UTR Intra-chr q13.5 Tumor suppressor gene q14.1 STE:STE20 Seq+ 78196 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A2-A0CY-01A 145 5'UTR-5'UTR Inter-chr q24.33 q13.33 78197 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SND1-CD2BP2 SND1 chr7 127498004 - CD2BP2 chr16 30363909 - Exonic hg19 BRCA TCGA-EW-A1P5-01A 159 CDS-3'UTR Inter-chr q32.1 p11.2 78198 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26796139 - FOXO1 chr13 41192773 + Exonic hg19 BRCA TCGA-A7-A0D9-01A 114 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 78199 ChimerSeq Tophat-Fusion TCGA_RNA-Seq S1PR5-ATG4D S1PR5 chr19 10624169 - ATG4D chr19 10655805 - Exonic hg19 LUSC TCGA-66-2766-01A 507 3'UTR-CDS Intra-chr p13.2 p13.2 78200 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF19A-PRSS3 RNF19A chr8 101322094 - PRSS3 chr9 33796640 + Exonic hg19 LUSC TCGA-21-1080-01A 171 5'UTR-CDS Inter-chr q22.2 p13.3 Seq+ 78201 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HRH1-VGLL4 HRH1 chr3 11236889 + VGLL4 chr3 11744444 + Exonic hg19 LUSC TCGA-96-A4JK-01A 125 5'UTR-5'UTR Intra-chr p25.3 p25.2 78202 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUSC TCGA-98-8023-01A 158 5'UTR-5'UTR Inter-chr q24.33 q13.33 78203 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MCF2L2-KLHL24 MCF2L2 chr3 183005392 - KLHL24 chr3 183353580 - Exonic hg19 LUSC TCGA-56-A4BY-01A 1723 CDS-5'UTR Intra-chr q27.1 q27.1 78204 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KLHL24-MCF2L2 KLHL24 chr3 183353580 + MCF2L2 chr3 182948804 - Exonic hg19 LUSC TCGA-56-7223-01A 100 5'UTR-CDS Intra-chr q27.1 q27.1 Seq+ 78205 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KLHL24-MCF2L2 KLHL24 chr3 183361329 + MCF2L2 chr3 182948804 - Exonic hg19 LUSC TCGA-56-7223-01A 105 5'UTR-CDS Intra-chr q27.1 q27.1 Seq+ 78206 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNRF3-ZC3H7B ZNRF3 chr22 29383188 + ZC3H7B chr22 41716658 + Exonic hg19 LUSC TCGA-68-A59I-01A 194 CDS-5'UTR Intra-chr q12.1 q13.2 Seq+ 78207 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZHX2-LELP1 ZHX2 chr8 123794184 + LELP1 chr1 153177162 + Exonic hg19 LUSC TCGA-98-8023-01A 131 5'UTR-5'UTR Inter-chr q24.13 Tumor suppressor gene Transcription factor q21.3 Seq+ 78208 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HEXIM2-AES HEXIM2 chr17 43238623 - AES chr19 3057739 - Exonic hg19 LUSC TCGA-56-A4BY-01A 106 5'UTR-5'UTR Inter-chr q21.31 p13.3 78209 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HEXIM2-AES HEXIM2 chr17 43238827 - AES chr19 3057739 - Exonic hg19 LUSC TCGA-56-A4BY-01A 106 5'UTR-5'UTR Inter-chr q21.31 p13.3 78210 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-46-3768-01A 117 5'UTR-5'UTR Inter-chr q24.33 q13.33 78211 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUSC TCGA-46-3768-01A 117 5'UTR-5'UTR Inter-chr q24.33 q13.33 78212 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TXNRD1-GLT8D2 TXNRD1 chr12 104682817 + GLT8D2 chr12 104413453 - Exonic hg19 LUSC TCGA-33-AASB-01A 757 5'UTR-5'UTR Intra-chr q23.3 q23.3 Seq+ 78213 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TXNRD1-GLT8D2 TXNRD1 chr12 104682817 + GLT8D2 chr12 104415268 - Exonic hg19 LUSC TCGA-33-AASB-01A 757 5'UTR-5'UTR Intra-chr q23.3 q23.3 Seq+ 78214 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TXNRD1-GLT8D2 TXNRD1 chr12 104682817 + GLT8D2 chr12 104444065 - Exonic hg19 LUSC TCGA-33-AASB-01A 645 5'UTR-5'UTR Intra-chr q23.3 q23.3 Seq+ 78215 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TXNRD1-GLT8D2 TXNRD1 chr12 104682817 + GLT8D2 chr12 104447145 - Exonic hg19 LUSC TCGA-33-AASB-01A 644 5'UTR-5'UTR Intra-chr q23.3 q23.3 Seq+ 78216 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC38A10-TMEM105 SLC38A10 chr17 79225514 - TMEM105 chr17 79303836 - Exonic hg19 LUSC TCGA-33-6738-01A 141 CDS-5'UTR Intra-chr q25.3 q25.3 78217 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HIPK3-GYLTL1B HIPK3 chr11 33279434 + GYLTL1B chr11 45947589 + Exonic hg19 LUSC TCGA-43-6771-01A 447 5'UTR-CDS Intra-chr p13 CMGC:DYRK Seq+ 78218 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HIPK3-GYLTL1B HIPK3 chr11 33279434 + GYLTL1B chr11 45947772 + Exonic hg19 LUSC TCGA-43-6771-01A 447 5'UTR-CDS Intra-chr p13 CMGC:DYRK Seq+ 78219 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HIPK3-GYLTL1B HIPK3 chr11 33280235 + GYLTL1B chr11 45947772 + Exonic hg19 LUSC TCGA-43-6771-01A 447 5'UTR-CDS Intra-chr p13 CMGC:DYRK Seq+ 78220 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPP6R3-ARHGAP1 PPP6R3 chr11 68228294 + ARHGAP1 chr11 46717705 - Exonic hg19 LUSC TCGA-43-6771-01A 138 5'UTR-5'UTR Intra-chr q13.2 p11.2 Seq+ 78221 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PVT1-TRIB1 PVT1 chr8 128806979 + TRIB1 chr8 126448247 + Exonic hg19 LUSC TCGA-43-8116-01A 3227 5'UTR-CDS Intra-chr q24.21 q24.13 Seq+ 78222 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26796139 - FOXO1 chr13 41192773 + Exonic hg19 LUSC TCGA-43-8118-01A 160 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 78223 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26796139 - FOXO1 chr13 41192773 + Exonic hg19 LUSC TCGA-22-5483-01A 259 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 78224 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MYH9-GRAP2 MYH9 chr22 36708093 - GRAP2 chr22 40323123 - Exonic hg19 LUSC TCGA-58-A46J-01A 177 CDS-5'UTR Intra-chr q12.3 Oncogene Tumor suppressor gene q13.1 78225 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MYH9-GRAP2 MYH9 chr22 36708093 - GRAP2 chr22 40329044 - Exonic hg19 LUSC TCGA-58-A46J-01A 181 CDS-5'UTR Intra-chr q12.3 Oncogene Tumor suppressor gene q13.1 78226 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SERINC2-ZCCHC17 SERINC2 chr1 31907172 + ZCCHC17 chr1 31797133 + Exonic hg19 LUSC TCGA-LA-A7SW-01A 117 3'UTR-CDS Intra-chr p35.2 p35.2 Seq+ 78227 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HEXA-HIGD2B HEXA chr15 72668060 - HIGD2B chr15 72977954 + Exonic hg19 LUSC TCGA-L3-A524-01A 181 CDS-3'UTR Intra-chr q23 q24.1 78228 ChimerSeq Tophat-Fusion TCGA_RNA-Seq C2orf74-XPO1 C2orf74 chr2 61378848 + XPO1 chr2 61722589 + Exonic hg19 LUSC TCGA-NC-A5HT-01A 313 5'UTR-CDS Intra-chr p15 p15 Oncogene 78229 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EGFR-SEC61G EGFR chr7 55087057 + SEC61G chr7 54825286 - Exonic hg19 LUSC TCGA-85-8351-01A 259 CDS-5'UTR Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 78230 ChimerSeq Tophat-Fusion TCGA_RNA-Seq C6orf132-TRERF1 C6orf132 chr6 42069589 - TRERF1 chr6 42200629 - Exonic hg19 LUSC TCGA-NC-A5HJ-01A 269 3'UTR-CDS Intra-chr p21.1 p21.1 Transcription factor Seq+ 78231 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERAS-TIMM17B ERAS chrX 48687490 - TIMM17B chrX 48755296 - Exonic hg19 LUSC TCGA-66-2793-01A 176 5'UTR-5'UTR Intra-chr p11.23 p11.23 78232 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERAS-TIMM17B ERAS chrX 48687490 - TIMM17B chrX 48755364 - Exonic hg19 LUSC TCGA-66-2793-01A 176 5'UTR-5'UTR Intra-chr p11.23 p11.23 78233 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DLG1-WDR53 DLG1 chr3 197009549 - WDR53 chr3 196288361 - Exonic hg19 LUSC TCGA-51-6867-01A 224 5'UTR-5'UTR Intra-chr q29 Tumor suppressor gene q29 Seq+ 78234 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-37-3783-01A 106 5'UTR-5'UTR Inter-chr q24.33 q13.33 78235 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FNDC3B-SLC7A14 FNDC3B chr3 171757560 + SLC7A14 chr3 170204156 - Exonic hg19 LUSC TCGA-51-6867-01A 308 5'UTR-CDS Intra-chr q26.31 q26.2 Seq+ 78236 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC36A1-FAT2 SLC36A1 chr5 150837738 + FAT2 chr5 150942885 + Exonic hg19 LUSC TCGA-58-A46L-01A 236 5'UTR-CDS Intra-chr q33.1 q33.1 78237 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR82-TMEM110 WDR82 chr3 52290554 - TMEM110 chr3 52878004 + Exonic hg19 LUSC TCGA-85-8287-01A 173 3'UTR-CDS Intra-chr p21.2 p21.1 78238 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT2-MAP3K10 AKT2 chr19 40789258 - MAP3K10 chr19 40711535 + Exonic hg19 LUSC TCGA-85-A510-01A 428 5'UTR-CDS Intra-chr q13.2 AGC:Akt Oncogene q13.2 Seq+ 78239 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT2-MAP3K10 AKT2 chr19 40791087 - MAP3K10 chr19 40711817 + Exonic hg19 LUSC TCGA-85-A510-01A 428 5'UTR-CDS Intra-chr q13.2 AGC:Akt Oncogene q13.2 Seq+ 78240 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MAP3K10-C19orf47 MAP3K10 chr19 40715125 + C19orf47 chr19 40847796 - Exonic hg19 LUSC TCGA-85-A510-01A 191 Out-of-Frame Intra-chr q13.2 q13.2 Seq+ 78241 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CREBBP-PRSS33 CREBBP chr16 3929832 - PRSS33 chr16 2836604 - Exonic hg19 LUSC TCGA-33-4587-01A 168 CDS-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 78242 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CYB561-AMZ2P1 CYB561 chr17 61520425 - AMZ2P1 chr17 62964530 - Exonic hg19 LUSC TCGA-77-7140-01A 232 5'UTR-3'UTR Intra-chr q23.3 q24.1 Seq+ 78243 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H3F3A-PARP1 H3F3A chr1 226251532 + PARP1 chr1 226564808 + Exonic hg19 LUSC TCGA-34-A5IX-01A 220 5'UTR-CDS Intra-chr q42.12 Oncogene q42.12 Oncogene Tumor suppressor gene 78244 ChimerSeq Tophat-Fusion TCGA_RNA-Seq STX5-SNHG1 STX5 chr11 62591637 - SNHG1 chr11 62620152 - Exonic hg19 LUSC TCGA-46-6025-01A 161 CDS-3'UTR Intra-chr q12.3 q12.3 Seq+ 78245 ChimerSeq Tophat-Fusion TCGA_RNA-Seq STX5-SNHG1 STX5 chr11 62591637 - SNHG1 chr11 62620310 - Exonic hg19 LUSC TCGA-46-6025-01A 161 CDS-3'UTR Intra-chr q12.3 q12.3 Seq+ 78246 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AP2M1-MAP3K13 AP2M1 chr3 183898771 + MAP3K13 chr3 185046411 + Exonic hg19 LUSC TCGA-56-8628-01A 530 In-Frame Intra-chr q27.1 q27.2 Seq+ 78247 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WASF2-AHDC1 WASF2 chr1 27816496 - AHDC1 chr1 27885393 - Exonic hg19 LUSC TCGA-56-8082-01A 137 5'UTR-5'UTR Intra-chr p36.11 p35.3 Transcription factor Seq+ 78248 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26795971 - FOXO1 chr13 41192773 + Exonic hg19 LUSC TCGA-92-7340-11A 104 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 78249 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26796139 - FOXO1 chr13 41192773 + Exonic hg19 LUSC TCGA-66-2792-01A 103 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 78250 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26796139 - FOXO1 chr13 41192773 + Exonic hg19 LUSC TCGA-92-7340-11A 104 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 78251 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FBXL20-ORMDL3 FBXL20 chr17 37557613 - ORMDL3 chr17 38080477 - Exonic hg19 LUSC TCGA-22-0944-01A 264 CDS-5'UTR Intra-chr q12 q21.1 Seq+ 78252 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LIMCH1-OCIAD2 LIMCH1 chr4 41362952 + OCIAD2 chr4 48906627 - Exonic hg19 LUSC TCGA-22-A5C4-01A 142 5'UTR-5'UTR Intra-chr p13 p11 Seq+ 78253 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KLHL29-GPN1 KLHL29 chr2 23664677 + GPN1 chr2 27852818 - Exonic hg19 LUSC TCGA-21-1076-01A 148 5'UTR-5'UTR Intra-chr p24.1 p23.3 78254 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MYBBP1A-ANKFY1 MYBBP1A chr17 4457104 - ANKFY1 chr17 4067466 - Exonic hg19 LUSC TCGA-22-5477-01A 603 CDS-3'UTR Intra-chr p13.2 Tumor suppressor gene p13.2 Seq+ 78255 ChimerSeq Tophat-Fusion TCGA_RNA-Seq C19orf48-ACPT C19orf48 chr19 51301155 - ACPT chr19 51297144 + Exonic hg19 LUSC TCGA-21-1081-01A 121 3'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 78256 ChimerSeq Tophat-Fusion TCGA_RNA-Seq C19orf48-ACPT C19orf48 chr19 51301326 - ACPT chr19 51297143 + Exonic hg19 LUSC TCGA-21-1081-01A 121 3'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 78257 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402500 - RPS11 chr19 50001192 + Exonic hg19 LUSC TCGA-37-4130-01A 131 5'UTR-5'UTR Inter-chr q24.33 q13.33 78258 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SUPT3H-CD2AP SUPT3H chr6 44797324 - CD2AP chr6 47567178 - Exonic hg19 LUSC TCGA-66-2800-01A 239 3'UTR-CDS Intra-chr p21.1 p12.3 78259 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EPB41L1-SLC35C2 EPB41L1 chr20 34705309 + SLC35C2 chr20 44983520 + Exonic hg19 LUSC TCGA-22-5478-01A 465 5'UTR-CDS Intra-chr q11.23 q13.12 78260 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EPB41L1-SLC35C2 EPB41L1 chr20 34709445 + SLC35C2 chr20 44983520 + Exonic hg19 LUSC TCGA-22-5478-01A 465 5'UTR-CDS Intra-chr q11.23 q13.12 78261 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MRPL14-HSP90AB1 MRPL14 chr6 44088091 - HSP90AB1 chr6 44220994 - Exonic hg19 LUSC TCGA-56-A4BX-01A 644 5'UTR-CDS Intra-chr p21.1 p21.1 Oncogene 78262 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TBL1XR1-PEX5L TBL1XR1 chr3 176914127 - PEX5L chr3 179566718 + Exonic hg19 LUSC TCGA-56-A4BX-01A 109 5'UTR-CDS Intra-chr q26.32 q26.33 78263 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TBL1XR1-PEX5L TBL1XR1 chr3 176914908 - PEX5L chr3 179566718 + Exonic hg19 LUSC TCGA-56-A4BX-01A 109 5'UTR-CDS Intra-chr q26.32 q26.33 78264 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TBL1XR1-PEX5L TBL1XR1 chr3 176914908 - PEX5L chr3 179570791 + Exonic hg19 LUSC TCGA-56-A4BX-01A 108 5'UTR-CDS Intra-chr q26.32 q26.33 78265 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TBL1XR1-PEX5L TBL1XR1 chr3 176914908 - PEX5L chr3 179598675 + Exonic hg19 LUSC TCGA-56-A4BX-01A 102 5'UTR-5'UTR Intra-chr q26.32 q26.33 78266 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WASF2-AHDC1 WASF2 chr1 27816496 - AHDC1 chr1 27861426 - Exonic hg19 LUSC TCGA-66-2800-01A 121 5'UTR-3'UTR Intra-chr p36.11 p35.3 Transcription factor Seq+ 78267 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26796139 - FOXO1 chr13 41192773 + Exonic hg19 LUSC TCGA-96-7545-01A 144 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 78268 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FAT1-IRF2 FAT1 chr4 187530336 - IRF2 chr4 185350223 - Exonic hg19 LUSC TCGA-63-A5MJ-01A 109 CDS-5'UTR Intra-chr q35.2 Tumor suppressor gene q35.1 Transcription factor Seq+ 78269 ChimerSeq Tophat-Fusion TCGA_RNA-Seq VWA5B2-PVT1 VWA5B2 chr3 183952539 + PVT1 chr8 128870190 - Exonic hg19 LUSC TCGA-56-5898-01A 423 CDS-5'UTR Inter-chr q27.1 q24.21 78270 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PVT1-RGS20 PVT1 chr8 128806979 + RGS20 chr8 54826056 + Exonic hg19 LUSC TCGA-63-A5MJ-01A 350 5'UTR-CDS Intra-chr q24.21 q11.23 Seq+ 78271 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PVT1-RGS20 PVT1 chr8 128808253 + RGS20 chr8 54826056 + Exonic hg19 LUSC TCGA-63-A5MJ-01A 350 5'UTR-CDS Intra-chr q24.21 q11.23 Seq+ 78272 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26795971 - FOXO1 chr13 41192773 + Exonic hg19 LUSC TCGA-LA-A446-01A 149 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 78273 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF6-FOXO1 RNF6 chr13 26796139 - FOXO1 chr13 41192773 + Exonic hg19 LUSC TCGA-LA-A446-01A 149 5'UTR-CDS Intra-chr q12.13 q14.11 Oncogene Tumor suppressor gene Transcription factor 78274 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SFTPA2-B2M SFTPA2 chr10 81316689 + B2M chr15 45010014 + Exonic hg19 LUSC TCGA-51-4080-11A 193 3'UTR-3'UTR Inter-chr q22.3 Oncogene 78275 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUSC TCGA-51-4080-11A 106 5'UTR-5'UTR Inter-chr q24.33 q13.33 78276 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KLHL29-GPN1 KLHL29 chr2 23664677 + GPN1 chr2 27852818 - Exonic hg19 LUSC TCGA-21-1076-01A 150 5'UTR-5'UTR Intra-chr p24.1 p23.3 78277 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NUP62-ATF5 NUP62 chr19 50432581 - ATF5 chr19 50433987 + Exonic hg19 LUSC TCGA-96-7544-01A 104 5'UTR-5'UTR Intra-chr q13.33 q13.33 Transcription factor Seq+ 78278 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-34-5240-01A 137 5'UTR-5'UTR Inter-chr q24.33 q13.33 78279 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 49999682 + Exonic hg19 PRAD TCGA-EJ-A7NJ-01A 28 5'UTR-5'UTR Inter-chr q24.33 q13.33 78280 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-EJ-A65M-01A 88 5'UTR-5'UTR Inter-chr q24.33 q13.33 78281 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-J4-A67M-01A 80 5'UTR-5'UTR Inter-chr q24.33 q13.33 78282 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-KK-A7AU-01A 60 5'UTR-5'UTR Inter-chr q24.33 q13.33 78283 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-KK-A7AP-01A 40 5'UTR-5'UTR Inter-chr q24.33 q13.33 78284 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786564 - DHPS chr19 12786851 - Exonic hg19 PRAD TCGA-HC-8265-01A 17 5'UTR-CDS Intra-chr p13.13 p13.13 78285 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-KK-A8I6-01A 38 5'UTR-5'UTR Inter-chr q24.33 q13.33 78286 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-EJ-7783-11A 91 5'UTR-5'UTR Inter-chr q24.33 q13.33 78287 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-CH-5767-01A 82 5'UTR-5'UTR Inter-chr q24.33 q13.33 78288 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-KK-A7B4-01A 64 5'UTR-5'UTR Inter-chr q24.33 q13.33 78289 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-YL-A9WY-01A 35 5'UTR-5'UTR Inter-chr q24.33 q13.33 78290 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-V1-A8MM-01A 34 5'UTR-5'UTR Inter-chr q24.33 q13.33 78291 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-ZG-A9L0-01A 33 5'UTR-5'UTR Inter-chr q24.33 q13.33 78292 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786619 - DHPS chr19 12786856 - Exonic hg19 PRAD TCGA-EJ-7325-01B 20 5'UTR-CDS Intra-chr p13.13 p13.13 78293 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786620 - DHPS chr19 12786854 - Exonic hg19 PRAD TCGA-ZG-A9L0-01A 4 5'UTR-CDS Intra-chr p13.13 p13.13 78294 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-HC-A6AO-01A 99 5'UTR-5'UTR Inter-chr q24.33 q13.33 78295 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-KK-A8IL-01A 49 5'UTR-5'UTR Inter-chr q24.33 q13.33 78296 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380944 - TBC1D17 chr19 50383599 - Exonic hg19 PRAD TCGA-G9-6499-11A 2 5'UTR-CDS Intra-chr q13.33 q13.33 78297 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-KK-A8IC-01A 41 5'UTR-5'UTR Inter-chr q24.33 q13.33 78298 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-YL-A8S9-01A 21 5'UTR-5'UTR Inter-chr q24.33 q13.33 78299 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-YL-A8SP-01B 23 5'UTR-5'UTR Inter-chr q24.33 q13.33 78300 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-ZG-A9L5-01A 65 5'UTR-5'UTR Inter-chr q24.33 q13.33 78301 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-V1-A8MJ-01A 19 5'UTR-5'UTR Inter-chr q24.33 q13.33 78302 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-XK-AAJP-01A 41 5'UTR-5'UTR Inter-chr q24.33 q13.33 78303 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-EJ-A8FO-01A 64 5'UTR-5'UTR Inter-chr q24.33 q13.33 78304 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-XK-AAJP-01A 41 5'UTR-5'UTR Inter-chr q24.33 q13.33 78305 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786642 + DHPS chr19 12786854 - Exonic hg19 PRAD TCGA-HC-8261-01A 37 5'UTR-CDS Intra-chr p13.13 p13.13 78306 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402281 - RPS11 chr19 49999644 + Exonic hg19 PRAD TCGA-KK-A7B1-01A 50 5'UTR-5'UTR Inter-chr q24.33 q13.33 78307 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-KC-A7FD-01A 30 5'UTR-5'UTR Inter-chr q24.33 q13.33 78308 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-ZG-A9LY-01A 35 5'UTR-5'UTR Inter-chr q24.33 q13.33 78309 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402499 - RPS11 chr19 50001192 + Exonic hg19 PRAD TCGA-ZG-A9LY-01A 35 5'UTR-5'UTR Inter-chr q24.33 q13.33 78310 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-J9-A52E-01A 48 5'UTR-5'UTR Inter-chr q24.33 q13.33 78311 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-VP-A87E-01A 55 5'UTR-5'UTR Inter-chr q24.33 q13.33 78312 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-V1-A9Z7-01A 56 5'UTR-5'UTR Inter-chr q24.33 q13.33 78313 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-V1-A9Z7-01A 56 5'UTR-5'UTR Inter-chr q24.33 q13.33 78314 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-V1-A9ZG-01A 61 5'UTR-5'UTR Inter-chr q24.33 q13.33 78315 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERG-TMPRSS2 ERG chr21 39744930 - TMPRSS2 chr21 42870045 + Exonic hg19 PRAD TCGA-J9-A52B-01A 80 Out-of-Frame Intra-chr q22.2 Oncogene Transcription factor q22.3 Seq+ 78316 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERG-TMPRSS2 ERG chr21 39744989 - TMPRSS2 chr21 42870045 + Exonic hg19 PRAD TCGA-J9-A52B-01A 80 Out-of-Frame Intra-chr q22.2 Oncogene Transcription factor q22.3 Seq+ 78317 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165667 - PPP1CA chr11 67166086 - Exonic hg19 PRAD TCGA-M7-A725-01A 9 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 78318 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 49999668 + Exonic hg19 PRAD TCGA-YL-A9WJ-01A 42 5'UTR-5'UTR Inter-chr q24.33 q13.33 78319 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-EJ-A65J-01A 38 5'UTR-5'UTR Inter-chr q24.33 q13.33 78320 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-HC-7817-01B 60 5'UTR-5'UTR Inter-chr q24.33 q13.33 78321 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-ZG-A9LS-01A 27 5'UTR-5'UTR Inter-chr q24.33 q13.33 78322 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-G9-6332-01A 44 5'UTR-5'UTR Inter-chr q24.33 q13.33 78323 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 49999683 + Exonic hg19 PRAD TCGA-KC-A7FA-01A 23 5'UTR-5'UTR Inter-chr q24.33 q13.33 78324 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-KC-A7FA-01A 23 5'UTR-5'UTR Inter-chr q24.33 q13.33 78325 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402417 - RPS11 chr19 50000562 + Exonic hg19 PRAD TCGA-KC-A7FA-01A 23 5'UTR-5'UTR Inter-chr q24.33 q13.33 78326 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380958 - TBC1D17 chr19 50381796 - Exonic hg19 PRAD TCGA-EJ-7783-01A 10 5'UTR-CDS Intra-chr q13.33 q13.33 78327 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-EJ-A46D-01A 43 5'UTR-5'UTR Inter-chr q24.33 q13.33 78328 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380958 - TBC1D17 chr19 50381797 - Exonic hg19 PRAD TCGA-J4-A83I-01A 11 5'UTR-CDS Intra-chr q13.33 q13.33 78329 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-V1-A9OH-01A 63 5'UTR-5'UTR Inter-chr q24.33 q13.33 78330 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-ZG-A9L6-01A 37 5'UTR-5'UTR Inter-chr q24.33 q13.33 78331 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-ZG-A9L6-01A 37 5'UTR-5'UTR Inter-chr q24.33 q13.33 78332 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 49999683 + Exonic hg19 PRAD TCGA-YL-A8SO-01B 42 5'UTR-5'UTR Inter-chr q24.33 q13.33 78333 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-KK-A7AV-01A 66 5'UTR-5'UTR Inter-chr q24.33 q13.33 78334 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-VN-A943-01A 36 5'UTR-5'UTR Inter-chr q24.33 q13.33 78335 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402415 - RPS11 chr19 49999668 + Exonic hg19 PRAD TCGA-YL-A8SO-01B 42 5'UTR-5'UTR Inter-chr q24.33 q13.33 78336 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-HC-A8CY-01A 34 5'UTR-5'UTR Inter-chr q24.33 q13.33 78337 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-VP-A875-01A 95 5'UTR-5'UTR Inter-chr q24.33 q13.33 78338 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-VP-A878-01A 65 5'UTR-5'UTR Inter-chr q24.33 q13.33 78339 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-YL-A8SJ-01B 66 5'UTR-5'UTR Inter-chr q24.33 q13.33 78340 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-ZG-A8QY-01A 23 5'UTR-5'UTR Inter-chr q24.33 q13.33 78341 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402416 - RPS11 chr19 50001188 + Exonic hg19 PRAD TCGA-YL-A8HO-01A 34 5'UTR-5'UTR Inter-chr q24.33 q13.33 78342 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-HC-A8CY-01A 34 5'UTR-5'UTR Inter-chr q24.33 q13.33 78343 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-G9-A9S0-01A 32 5'UTR-5'UTR Inter-chr q24.33 q13.33 78344 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402501 - RPS11 chr19 50001192 + Exonic hg19 PRAD TCGA-KK-A8I8-01A 29 5'UTR-5'UTR Inter-chr q24.33 q13.33 78345 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402290 - RPS11 chr19 49999673 + Exonic hg19 PRAD TCGA-WW-A8ZI-01A 19 5'UTR-5'UTR Inter-chr q24.33 q13.33 78346 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-J4-AAU2-01A 34 5'UTR-5'UTR Inter-chr q24.33 q13.33 78347 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COG1-FAM104A COG1 chr17 71204425 - FAM104A chr17 71204654 - Exonic hg19 PRAD TCGA-EJ-5499-01A 16 CDS-3'UTR Intra-chr q25.1 q25.1 78348 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-J4-AATV-01A 19 5'UTR-5'UTR Inter-chr q24.33 q13.33 78349 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-HC-8216-01A 78 5'UTR-5'UTR Inter-chr q24.33 q13.33 78350 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402490 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-KK-A59V-01A 49 5'UTR-5'UTR Inter-chr q24.33 q13.33 78351 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-EJ-5502-01A 98 5'UTR-5'UTR Inter-chr q24.33 q13.33 78352 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-G9-7521-01A 42 5'UTR-5'UTR Inter-chr q24.33 q13.33 78353 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 49999668 + Exonic hg19 PRAD TCGA-HC-7747-11A 38 5'UTR-5'UTR Inter-chr q24.33 q13.33 78354 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402418 - RPS11 chr19 49999693 + Exonic hg19 PRAD TCGA-KK-A59Z-01A 77 5'UTR-5'UTR Inter-chr q24.33 q13.33 78355 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-J4-A67Q-01A 68 5'UTR-5'UTR Inter-chr q24.33 q13.33 78356 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-G9-7509-01A 32 5'UTR-5'UTR Inter-chr q24.33 q13.33 78357 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-XK-AAIW-01A 78 5'UTR-5'UTR Inter-chr q24.33 q13.33 78358 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-Y6-A9XI-01A 36 5'UTR-5'UTR Inter-chr q24.33 q13.33 78359 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-G9-7509-01A 32 5'UTR-5'UTR Inter-chr q24.33 q13.33 78360 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-J4-A83J-11A 49 5'UTR-5'UTR Inter-chr q24.33 q13.33 78361 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-Y6-A9XI-01A 36 5'UTR-5'UTR Inter-chr q24.33 q13.33 78362 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-XK-AAJT-01A 34 5'UTR-5'UTR Inter-chr q24.33 q13.33 78363 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-KK-A6E6-01A 56 5'UTR-5'UTR Inter-chr q24.33 q13.33 78364 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-KK-A8IB-01A 52 5'UTR-5'UTR Inter-chr q24.33 q13.33 78365 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380952 - TBC1D17 chr19 50383628 - Exonic hg19 PRAD TCGA-KK-A6E6-01A 3 5'UTR-CDS Intra-chr q13.33 q13.33 78366 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-VN-A88K-01A 77 5'UTR-5'UTR Inter-chr q24.33 q13.33 78367 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 PRAD TCGA-ZG-A9NI-01A 28 5'UTR-5'UTR Inter-chr q24.33 q13.33 78368 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402420 - RPS11 chr19 49999699 + Exonic hg19 PRAD TCGA-ZG-A9NI-01A 28 5'UTR-5'UTR Inter-chr q24.33 q13.33 78369 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-KC-A4BV-01A 98 5'UTR-5'UTR Inter-chr q24.33 q13.33 78370 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402500 - RPS11 chr19 50001203 + Exonic hg19 PRAD TCGA-2A-A8VX-01A 91 5'UTR-5'UTR Inter-chr q24.33 q13.33 78371 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402285 - RPS11 chr19 50000534 + Exonic hg19 PRAD TCGA-2A-A8VT-01A 36 5'UTR-5'UTR Inter-chr q24.33 q13.33 78372 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-HC-7212-01A 83 5'UTR-5'UTR Inter-chr q24.33 q13.33 78373 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-M7-A724-01A 72 5'UTR-5'UTR Inter-chr q24.33 q13.33 78374 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 PRAD TCGA-J4-A67O-01A 90 5'UTR-5'UTR Inter-chr q24.33 q13.33 78375 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380947 - TBC1D17 chr19 50383541 + Exonic hg19 STAD TCGA-BR-A4J9-01A 12 5'UTR-CDS Intra-chr q13.33 q13.33 78376 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380950 - TBC1D17 chr19 50385614 + Exonic hg19 STAD TCGA-BR-A4J9-01A 12 5'UTR-CDS Intra-chr q13.33 q13.33 78377 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380953 - TBC1D17 chr19 50385334 + Exonic hg19 STAD TCGA-BR-A4J9-01A 12 5'UTR-CDS Intra-chr q13.33 q13.33 78378 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380955 - TBC1D17 chr19 50385614 + Exonic hg19 STAD TCGA-BR-A4J9-01A 12 5'UTR-CDS Intra-chr q13.33 q13.33 78379 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402415 - RPS11 chr19 49999668 + Exonic hg19 STAD TCGA-BR-A4J9-01A 16 5'UTR-5'UTR Inter-chr q24.33 q13.33 78380 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 9 5'UTR-5'UTR Inter-chr q24.33 q13.33 78381 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402497 - RPS11 chr19 50001251 + Exonic hg19 STAD TCGA-HU-A4GJ-01A 9 5'UTR-5'UTR Inter-chr q24.33 q13.33 78382 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018504 + COL1A1 chr17 48261734 - Exonic hg19 HNSC TCGA-CR-6484-01A 12 3'UTR-3'UTR Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 78383 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402415 - RPS11 chr19 49999668 + Exonic hg19 HNSC TCGA-CQ-6229-01A 42 5'UTR-5'UTR Inter-chr q24.33 q13.33 78384 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 HNSC TCGA-MT-A51W-01A 22 5'UTR-5'UTR Inter-chr q24.33 q13.33 78385 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COG1-FAM104A COG1 chr17 71204361 - FAM104A chr17 71204671 - Exonic hg19 HNSC TCGA-MT-A51W-01A 6 CDS-3'UTR Intra-chr q25.1 q25.1 78386 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTA1-H19 ACTA1 chr1 229567379 + H19 chr11 2018773 - Exonic hg19 HNSC TCGA-CV-7245-11A 50 5'UTR-3'UTR Inter-chr q42.13 p15.5 Tumor suppressor gene 78387 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018914 + COL1A1 chr17 48261675 - Exonic hg19 HNSC TCGA-CV-7245-11A 31 3'UTR-3'UTR Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 78388 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 HNSC TCGA-CV-7235-01A 52 5'UTR-5'UTR Inter-chr q24.33 q13.33 78389 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 49999668 + Exonic hg19 HNSC TCGA-KU-A6H7-01A 61 5'UTR-5'UTR Inter-chr q24.33 q13.33 78390 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402499 - RPS11 chr19 50001192 + Exonic hg19 HNSC TCGA-CR-7404-01A 74 5'UTR-5'UTR Inter-chr q24.33 q13.33 78391 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50001185 + Exonic hg19 HNSC TCGA-MT-A7BN-01A 26 5'UTR-5'UTR Inter-chr q24.33 q13.33 78392 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KRT13-MUC21 KRT13 chr17 39661409 - MUC21 chr6 30955224 + Exonic hg19 HNSC TCGA-CV-7177-11A 23 Out-of-Frame Inter-chr q21.2 78393 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 HNSC TCGA-P3-A6SX-01A 32 5'UTR-5'UTR Inter-chr q24.33 q13.33 78394 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402285 - RPS11 chr19 50000534 + Exonic hg19 HNSC TCGA-CV-6961-11A 42 5'UTR-5'UTR Inter-chr q24.33 q13.33 78395 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 HNSC TCGA-CN-6992-01A 35 5'UTR-5'UTR Inter-chr q24.33 q13.33 78396 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 HNSC TCGA-BA-6871-01A 14 5'UTR-5'UTR Inter-chr q24.33 q13.33 78397 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 HNSC TCGA-CN-5367-01A 48 5'UTR-5'UTR Inter-chr q24.33 q13.33 78398 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 HNSC TCGA-CV-5970-01A 15 5'UTR-5'UTR Inter-chr q24.33 q13.33 78399 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018137 + COL1A1 chr17 48263310 - Exonic hg19 HNSC TCGA-CN-5367-01A 4 3'UTR-CDS Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 78400 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PAK2-LOC646214 PAK2 chr3 196530007 - LOC646214 chr15 21937677 - Exonic hg19 HNSC TCGA-BA-5151-01A 8 CDS-3'UTR Inter-chr q29 STE:STE20 78401 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402292 - RPS11 chr19 49999672 + Exonic hg19 HNSC TCGA-BB-4227-01A 47 5'UTR-5'UTR Inter-chr q24.33 q13.33 78402 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTA1-H19 ACTA1 chr1 229567847 + H19 chr11 2018855 - Exonic hg19 HNSC TCGA-CV-6939-11A 21 5'UTR-3'UTR Inter-chr q42.13 p15.5 Tumor suppressor gene 78403 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KRT4-S100A9 KRT4 chr12 53200733 - S100A9 chr1 153333149 + Exonic hg19 HNSC TCGA-CR-7393-01A 7 3'UTR-CDS Inter-chr q13.13 q21.3 78404 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402490 - RPS11 chr19 50000814 + Exonic hg19 THYM TCGA-YT-A95D-01A 20 5'UTR-5'UTR Inter-chr q24.33 q13.33 78405 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786635 - DHPS chr19 12786913 - Exonic hg19 THYM TCGA-4V-A9QN-01A 47 5'UTR-CDS Intra-chr p13.13 p13.13 78406 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 THYM TCGA-ZB-A96M-01A 59 5'UTR-5'UTR Inter-chr q24.33 q13.33 78407 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018502 + COL1A1 chr17 48262706 - Exonic hg19 THYM TCGA-XU-A92Z-01A 13 3'UTR-3'UTR Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 78408 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380933 - TBC1D17 chr19 50381826 - Exonic hg19 THYM TCGA-ZB-A96C-01A 11 5'UTR-CDS Intra-chr q13.33 q13.33 78409 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402287 - RPS11 chr19 50000535 + Exonic hg19 MESO TCGA-MQ-A4KX-01A 28 5'UTR-5'UTR Inter-chr q24.33 q13.33 78410 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018192 - COL1A1 chr17 48262795 - Exonic hg19 MESO TCGA-NQ-A57I-01A 6 3'UTR-3'UTR Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 78411 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 49999682 + Exonic hg19 MESO TCGA-LK-A4NW-01A 26 5'UTR-5'UTR Inter-chr q24.33 q13.33 78412 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 49999668 + Exonic hg19 MESO TCGA-MQ-A4LJ-01A 13 5'UTR-5'UTR Inter-chr q24.33 q13.33 78413 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 MESO TCGA-TS-A7P8-01A 44 5'UTR-5'UTR Inter-chr q24.33 q13.33 78414 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 KIRC TCGA-CW-5589-01A 25 5'UTR-5'UTR Inter-chr q24.33 q13.33 78415 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402414 - RPS11 chr19 50001193 + Exonic hg19 KIRC TCGA-CW-6088-11A 20 5'UTR-5'UTR Inter-chr q24.33 q13.33 78416 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 KIRC TCGA-B0-5693-01A 30 5'UTR-5'UTR Inter-chr q24.33 q13.33 78417 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 KIRC TCGA-BP-5180-01A 11 5'UTR-5'UTR Inter-chr q24.33 q13.33 78418 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786619 - DHPS chr19 12786874 - Exonic hg19 KIRC TCGA-BP-4992-01A 13 5'UTR-CDS Intra-chr p13.13 p13.13 78419 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402282 - RPS11 chr19 49999691 + Exonic hg19 KIRC TCGA-CW-5585-11A 92 5'UTR-5'UTR Inter-chr q24.33 q13.33 78420 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 KIRC TCGA-B4-5835-01A 33 5'UTR-5'UTR Inter-chr q24.33 q13.33 78421 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 KIRC TCGA-BP-4173-01A 36 5'UTR-5'UTR Inter-chr q24.33 q13.33 78422 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402418 - RPS11 chr19 49999693 + Exonic hg19 KIRC TCGA-B0-4816-01A 23 5'UTR-5'UTR Inter-chr q24.33 q13.33 78423 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 KIRC TCGA-B0-4816-01A 23 5'UTR-5'UTR Inter-chr q24.33 q13.33 78424 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MSH6-FBXO11 MSH6 chr2 48033764 - FBXO11 chr2 48034059 - Exonic hg19 KIRC TCGA-CJ-6033-01A 5 CDS-3'UTR Intra-chr p16.3 Oncogene p16.3 78425 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 KIRC TCGA-B0-5102-01A 87 5'UTR-5'UTR Inter-chr q24.33 q13.33 78426 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 KIRC TCGA-B0-5713-01A 22 5'UTR-5'UTR Inter-chr q24.33 q13.33 78427 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 KIRC TCGA-CZ-5982-01A 31 5'UTR-5'UTR Inter-chr q24.33 q13.33 78428 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 KIRC TCGA-A3-3325-01A 32 5'UTR-5'UTR Inter-chr q24.33 q13.33 78429 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CD74-SOD2 CD74 chr5 149781314 + SOD2 chr6 160102509 - Exonic hg19 KIRC TCGA-B8-5164-01A 6 3'UTR-3'UTR Inter-chr q33.1 q25.3 Tumor suppressor gene 78430 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CD74-SOD2 CD74 chr5 149781751 + SOD2 chr6 160114221 - Exonic hg19 KIRC TCGA-B8-5164-01A 9 3'UTR-5'UTR Inter-chr q33.1 q25.3 Tumor suppressor gene 78431 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 KIRC TCGA-AK-3450-01A 15 5'UTR-5'UTR Inter-chr q24.33 q13.33 78432 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CD74-SOD2 CD74 chr5 149781551 + SOD2 chr6 160101113 - Exonic hg19 KIRC TCGA-A3-3319-01A 10 3'UTR-3'UTR Inter-chr q33.1 q25.3 Tumor suppressor gene 78433 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402422 - RPS11 chr19 50001190 + Exonic hg19 KIRC TCGA-B0-5104-01A 15 5'UTR-5'UTR Inter-chr q24.33 q13.33 78434 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402285 - RPS11 chr19 50000534 + Exonic hg19 KIRC TCGA-A3-A8OV-01A 46 5'UTR-5'UTR Inter-chr q24.33 q13.33 78435 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 UCS TCGA-ND-A4WC-01A 43 5'UTR-5'UTR Inter-chr q24.33 q13.33 78436 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A2-A04Q-01A 96 5'UTR-5'UTR Inter-chr q24.33 q13.33 78437 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-E2-A1LK-01A 72 5'UTR-5'UTR Inter-chr q24.33 q13.33 78438 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402291 - RPS11 chr19 49999669 + Exonic hg19 BRCA TCGA-GM-A2DA-01A 37 5'UTR-5'UTR Inter-chr q24.33 q13.33 78439 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-A2-A04T-01A 72 5'UTR-5'UTR Inter-chr q24.33 q13.33 78440 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A2-A25A-01A 52 5'UTR-5'UTR Inter-chr q24.33 q13.33 78441 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-C8-A138-01A 11 5'UTR-5'UTR Inter-chr q24.33 q13.33 78442 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-D8-A1Y2-01A 51 5'UTR-5'UTR Inter-chr q24.33 q13.33 78443 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50001186 + Exonic hg19 BRCA TCGA-A2-A25A-01A 52 5'UTR-5'UTR Inter-chr q24.33 q13.33 78444 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402285 - RPS11 chr19 50000534 + Exonic hg19 BRCA TCGA-E2-A10C-01A 19 5'UTR-5'UTR Inter-chr q24.33 q13.33 78445 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AC-A2FF-01A 32 5'UTR-5'UTR Inter-chr q24.33 q13.33 78446 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-BH-A1F2-11A 26 5'UTR-5'UTR Inter-chr q24.33 q13.33 78447 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-C8-A12M-01A 36 5'UTR-5'UTR Inter-chr q24.33 q13.33 78448 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A8-A07F-01A 47 5'UTR-5'UTR Inter-chr q24.33 q13.33 78449 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-BH-A1F2-01A 29 5'UTR-5'UTR Inter-chr q24.33 q13.33 78450 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-OL-A5RW-01A 34 5'UTR-5'UTR Inter-chr q24.33 q13.33 78451 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-AC-A3W7-01A 94 5'UTR-5'UTR Inter-chr q24.33 q13.33 78452 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 38 5'UTR-5'UTR Inter-chr q24.33 q13.33 78453 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402285 - RPS11 chr19 50000535 + Exonic hg19 BRCA TCGA-C8-A26V-01A 23 5'UTR-5'UTR Inter-chr q24.33 q13.33 78454 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A8-A07U-01A 37 5'UTR-5'UTR Inter-chr q24.33 q13.33 78455 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AR-A0TT-01A 17 5'UTR-5'UTR Inter-chr q24.33 q13.33 78456 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-B6-A0I8-01A 50 5'UTR-5'UTR Inter-chr q24.33 q13.33 78457 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-AR-A1AL-01A 28 5'UTR-5'UTR Inter-chr q24.33 q13.33 78458 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-BH-A1FJ-01A 29 5'UTR-5'UTR Inter-chr q24.33 q13.33 78459 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-BH-A1FJ-01A 29 5'UTR-5'UTR Inter-chr q24.33 q13.33 78460 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTMS-MYH9 PTMS chr12 6879742 - MYH9 chr22 36690343 - Exonic hg19 BRCA TCGA-A8-A07O-01A 4 3'UTR-CDS Inter-chr p13.31 q12.3 Oncogene Tumor suppressor gene 78461 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AC-A7VB-01A 32 5'UTR-5'UTR Inter-chr q24.33 q13.33 78462 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-B6-A0X4-01A 28 5'UTR-5'UTR Inter-chr q24.33 q13.33 78463 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A2-A0CO-01A 30 5'UTR-5'UTR Inter-chr q24.33 q13.33 78464 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A8-A07Z-01A 17 5'UTR-5'UTR Inter-chr q24.33 q13.33 78465 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AC-A7VC-01A 55 5'UTR-5'UTR Inter-chr q24.33 q13.33 78466 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CD74-SOD2 CD74 chr5 149781385 + SOD2 chr6 160100449 - Exonic hg19 BRCA TCGA-EW-A1PB-01A 4 3'UTR-3'UTR Inter-chr q33.1 q25.3 Tumor suppressor gene 78467 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CD74-SOD2 CD74 chr5 149781513 + SOD2 chr6 160102705 - Exonic hg19 BRCA TCGA-EW-A1PB-01A 4 3'UTR-3'UTR Inter-chr q33.1 q25.3 Tumor suppressor gene 78468 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 49999668 + Exonic hg19 BRCA TCGA-B6-A0RL-01A 26 5'UTR-5'UTR Inter-chr q24.33 q13.33 78469 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AC-A2FG-01A 39 5'UTR-5'UTR Inter-chr q24.33 q13.33 78470 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-B6-A0RL-01A 26 5'UTR-5'UTR Inter-chr q24.33 q13.33 78471 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-BH-A18S-11A 49 5'UTR-5'UTR Inter-chr q24.33 q13.33 78472 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-A8-A08A-01A 24 5'UTR-5'UTR Inter-chr q24.33 q13.33 78473 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-C8-A131-01A 40 5'UTR-5'UTR Inter-chr q24.33 q13.33 78474 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-BH-A0H6-01A 90 5'UTR-5'UTR Inter-chr q24.33 q13.33 78475 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-B6-A40C-01A 88 5'UTR-5'UTR Inter-chr q24.33 q13.33 78476 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COL3A1-CLU COL3A1 chr2 189877115 - CLU chr8 27464040 - Exonic hg19 BRCA TCGA-AR-A0TY-01A 5 3'UTR-3'UTR Inter-chr q32.2 p21.1 Tumor suppressor gene 78477 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-E9-A1NG-11A 44 5'UTR-5'UTR Inter-chr q24.33 q13.33 78478 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 50000533 + Exonic hg19 BRCA TCGA-D8-A1JG-01B 14 5'UTR-5'UTR Inter-chr q24.33 q13.33 78479 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AC-A6NO-01A 10 5'UTR-5'UTR Inter-chr q24.33 q13.33 78480 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 49999668 + Exonic hg19 BRCA TCGA-BH-A0BD-01A 29 5'UTR-5'UTR Inter-chr q24.33 q13.33 78481 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AQ-A04J-01A 32 5'UTR-5'UTR Inter-chr q24.33 q13.33 78482 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-BH-A1FB-01A 33 5'UTR-5'UTR Inter-chr q24.33 q13.33 78483 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-E9-A24A-01A 70 5'UTR-5'UTR Inter-chr q24.33 q13.33 78484 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-A8-A0A7-01A 44 5'UTR-5'UTR Inter-chr q24.33 q13.33 78485 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402493 - RPS11 chr19 50001185 + Exonic hg19 BRCA TCGA-BH-A0BD-01A 29 5'UTR-5'UTR Inter-chr q24.33 q13.33 78486 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A2-A0YG-01A 19 5'UTR-5'UTR Inter-chr q24.33 q13.33 78487 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A8-A07R-01A 63 5'UTR-5'UTR Inter-chr q24.33 q13.33 78488 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-D8-A73W-01A 18 5'UTR-5'UTR Inter-chr q24.33 q13.33 78489 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-GM-A2DN-01A 35 5'UTR-5'UTR Inter-chr q24.33 q13.33 78490 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-A2-A0YG-01A 19 5'UTR-5'UTR Inter-chr q24.33 q13.33 78491 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-BH-A0HY-01A 49 5'UTR-5'UTR Inter-chr q24.33 q13.33 78492 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AC-A2FB-11A 26 5'UTR-5'UTR Inter-chr q24.33 q13.33 78493 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-E9-A1RD-01A 54 5'UTR-5'UTR Inter-chr q24.33 q13.33 78494 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-C8-A1HM-01A 76 5'UTR-5'UTR Inter-chr q24.33 q13.33 78495 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A2-A259-01A 44 5'UTR-5'UTR Inter-chr q24.33 q13.33 78496 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 46 5'UTR-5'UTR Inter-chr q24.33 q13.33 78497 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-D8-A1JM-01A 31 5'UTR-5'UTR Inter-chr q24.33 q13.33 78498 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A2-A0EN-01A 29 5'UTR-5'UTR Inter-chr q24.33 q13.33 78499 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AR-A24K-01A 82 5'UTR-5'UTR Inter-chr q24.33 q13.33 78500 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-A7-A13G-01A 20 5'UTR-5'UTR Inter-chr q24.33 q13.33 78501 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-AR-A24K-01A 82 5'UTR-5'UTR Inter-chr q24.33 q13.33 78502 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AR-A24U-01A 42 5'UTR-5'UTR Inter-chr q24.33 q13.33 78503 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-D8-A1JC-01A 32 5'UTR-5'UTR Inter-chr q24.33 q13.33 78504 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402285 - RPS11 chr19 50000534 + Exonic hg19 BRCA TCGA-A2-A0EW-01A 23 5'UTR-5'UTR Inter-chr q24.33 q13.33 78505 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-A8-A092-01A 45 5'UTR-5'UTR Inter-chr q24.33 q13.33 78506 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-BH-A209-11A 55 5'UTR-5'UTR Inter-chr q24.33 q13.33 78507 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402283 - RPS11 chr19 49999662 + Exonic hg19 BRCA TCGA-OL-A5D8-01A 23 5'UTR-5'UTR Inter-chr q24.33 q13.33 78508 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-E2-A1IH-01A 18 5'UTR-5'UTR Inter-chr q24.33 q13.33 78509 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-E2-A572-01A 42 5'UTR-5'UTR Inter-chr q24.33 q13.33 78510 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-EW-A1P3-01A 39 5'UTR-5'UTR Inter-chr q24.33 q13.33 78511 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PAK2-LOC646214 PAK2 chr3 196555190 - LOC646214 chr15 21936653 - Exonic hg19 BRCA TCGA-D8-A1JU-01A 6 CDS-3'UTR Inter-chr q29 STE:STE20 78512 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AC-A2QH-01A 68 5'UTR-5'UTR Inter-chr q24.33 q13.33 78513 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AC-A3TM-01A 92 5'UTR-5'UTR Inter-chr q24.33 q13.33 78514 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402416 - RPS11 chr19 50001188 + Exonic hg19 BRCA TCGA-B6-A400-01A 67 5'UTR-5'UTR Inter-chr q24.33 q13.33 78515 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-A7-A6VY-01A 8 5'UTR-5'UTR Inter-chr q24.33 q13.33 78516 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-AN-A041-01A 23 5'UTR-5'UTR Inter-chr q24.33 q13.33 78517 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-EW-A1J2-01A 17 5'UTR-5'UTR Inter-chr q24.33 q13.33 78518 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AC-A2FK-01A 19 5'UTR-5'UTR Inter-chr q24.33 q13.33 78519 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-BH-A0DT-11A 33 5'UTR-5'UTR Inter-chr q24.33 q13.33 78520 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402414 - RPS11 chr19 50001187 + Exonic hg19 BRCA TCGA-AC-A2FK-01A 19 5'UTR-5'UTR Inter-chr q24.33 q13.33 78521 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-BH-A0DL-11A 21 5'UTR-5'UTR Inter-chr q24.33 q13.33 78522 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RHOA-DAG1 RHOA chr3 49412866 - DAG1 chr3 49572175 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 36 CDS-3'UTR Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 78523 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 49999682 + Exonic hg19 BRCA TCGA-AC-A8OQ-01A 14 5'UTR-5'UTR Inter-chr q24.33 q13.33 78524 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AN-A0XO-01A 54 5'UTR-5'UTR Inter-chr q24.33 q13.33 78525 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-BH-A28Q-01A 44 5'UTR-5'UTR Inter-chr q24.33 q13.33 78526 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-E2-A14T-01A 41 5'UTR-5'UTR Inter-chr q24.33 q13.33 78527 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-EW-A1P4-01A 44 5'UTR-5'UTR Inter-chr q24.33 q13.33 78528 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-BH-A28Q-01A 44 5'UTR-5'UTR Inter-chr q24.33 q13.33 78529 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402498 - RPS11 chr19 50001194 + Exonic hg19 BRCA TCGA-BH-A18L-11A 19 5'UTR-5'UTR Inter-chr q24.33 q13.33 78530 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CD74-SOD2 CD74 chr5 149781345 + SOD2 chr6 160105941 - Exonic hg19 BRCA TCGA-EW-A1P4-01A 3 3'UTR-CDS Inter-chr q33.1 q25.3 Tumor suppressor gene 78531 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A1-A0SE-01A 26 5'UTR-5'UTR Inter-chr q24.33 q13.33 78532 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A8-A07G-01A 47 5'UTR-5'UTR Inter-chr q24.33 q13.33 78533 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AR-A2LN-01A 33 5'UTR-5'UTR Inter-chr q24.33 q13.33 78534 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-AR-A2LN-01A 33 5'UTR-5'UTR Inter-chr q24.33 q13.33 78535 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402805 - RPS11 chr19 49999694 + Exonic hg19 BRCA TCGA-A8-A099-01A 25 5'UTR-5'UTR Inter-chr q24.33 q13.33 78536 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AO-A03V-01A 55 5'UTR-5'UTR Inter-chr q24.33 q13.33 78537 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AR-A1AU-01A 36 5'UTR-5'UTR Inter-chr q24.33 q13.33 78538 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-D8-A1J8-01A 51 5'UTR-5'UTR Inter-chr q24.33 q13.33 78539 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-D8-A27G-01A 29 5'UTR-5'UTR Inter-chr q24.33 q13.33 78540 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402285 - RPS11 chr19 49999640 + Exonic hg19 BRCA TCGA-A8-A06T-01A 41 5'UTR-5'UTR Inter-chr q24.33 q13.33 78541 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402419 - RPS11 chr19 50000533 + Exonic hg19 BRCA TCGA-EW-A1OX-01A 37 5'UTR-5'UTR Inter-chr q24.33 q13.33 78542 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-BH-A0DH-01A 26 5'UTR-5'UTR Inter-chr q24.33 q13.33 78543 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786620 - DHPS chr19 12787983 - Exonic hg19 BRCA TCGA-BH-A28O-01A 6 5'UTR-CDS Intra-chr p13.13 p13.13 78544 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AO-A0J5-01A 44 5'UTR-5'UTR Inter-chr q24.33 q13.33 78545 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402490 - RPS11 chr19 50001186 + Exonic hg19 BRCA TCGA-D8-A1XM-01A 27 5'UTR-5'UTR Inter-chr q24.33 q13.33 78546 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018315 + COL1A1 chr17 48264104 - Exonic hg19 BRCA TCGA-AO-A0J5-01A 4 3'UTR-CDS Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 78547 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A2-A0CZ-01A 79 5'UTR-5'UTR Inter-chr q24.33 q13.33 78548 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A8-A08O-01A 37 5'UTR-5'UTR Inter-chr q24.33 q13.33 78549 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AR-A0U4-01A 31 5'UTR-5'UTR Inter-chr q24.33 q13.33 78550 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-C8-A274-01A 59 5'UTR-5'UTR Inter-chr q24.33 q13.33 78551 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-E2-A15A-01A 13 5'UTR-5'UTR Inter-chr q24.33 q13.33 78552 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-B6-A1KI-01A 21 5'UTR-5'UTR Inter-chr q24.33 q13.33 78553 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 49999668 + Exonic hg19 BRCA TCGA-A8-A08H-01A 36 5'UTR-5'UTR Inter-chr q24.33 q13.33 78554 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A8-A06N-01A 43 5'UTR-5'UTR Inter-chr q24.33 q13.33 78555 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AR-A1AX-01A 24 5'UTR-5'UTR Inter-chr q24.33 q13.33 78556 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AR-A2LQ-01A 35 5'UTR-5'UTR Inter-chr q24.33 q13.33 78557 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-C8-A275-01A 80 5'UTR-5'UTR Inter-chr q24.33 q13.33 78558 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-EW-A2FV-01A 27 5'UTR-5'UTR Inter-chr q24.33 q13.33 78559 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A7-A13G-01A 47 5'UTR-5'UTR Inter-chr q24.33 q13.33 78560 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AR-A1AJ-01A 24 5'UTR-5'UTR Inter-chr q24.33 q13.33 78561 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-E9-A1RD-11A 63 5'UTR-5'UTR Inter-chr q24.33 q13.33 78562 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402496 - RPS11 chr19 50001185 + Exonic hg19 BRCA TCGA-BH-A1F8-01A 44 5'UTR-5'UTR Inter-chr q24.33 q13.33 78563 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402285 - RPS11 chr19 50000535 + Exonic hg19 BRCA TCGA-AR-A24M-01A 29 5'UTR-5'UTR Inter-chr q24.33 q13.33 78564 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-A7-A13H-01A 27 5'UTR-5'UTR Inter-chr q24.33 q13.33 78565 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-D8-A1XA-01A 39 5'UTR-5'UTR Inter-chr q24.33 q13.33 78566 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402419 - RPS11 chr19 50000533 + Exonic hg19 BRCA TCGA-E2-A1L8-01A 46 5'UTR-5'UTR Inter-chr q24.33 q13.33 78567 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-D8-A1XU-01A 19 5'UTR-5'UTR Inter-chr q24.33 q13.33 78568 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-E2-A10E-01A 16 5'UTR-5'UTR Inter-chr q24.33 q13.33 78569 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-A2-A0D4-01A 17 5'UTR-5'UTR Inter-chr q24.33 q13.33 78570 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-BH-A0B3-11B 25 5'UTR-5'UTR Inter-chr q24.33 q13.33 78571 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-C8-A1HK-01A 43 5'UTR-5'UTR Inter-chr q24.33 q13.33 78572 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402500 - RPS11 chr19 50001191 + Exonic hg19 BRCA TCGA-A2-A0D4-01A 17 5'UTR-5'UTR Inter-chr q24.33 q13.33 78573 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AQ-A1H3-01A 28 5'UTR-5'UTR Inter-chr q24.33 q13.33 78574 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AR-A255-01A 46 5'UTR-5'UTR Inter-chr q24.33 q13.33 78575 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-B6-A0IC-01A 39 5'UTR-5'UTR Inter-chr q24.33 q13.33 78576 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-E2-A1LS-11A 28 5'UTR-5'UTR Inter-chr q24.33 q13.33 78577 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402418 - RPS11 chr19 50000814 + Exonic hg19 BRCA TCGA-E2-A1LS-11A 28 5'UTR-5'UTR Inter-chr q24.33 q13.33 78578 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402494 - RPS11 chr19 50001187 + Exonic hg19 BRCA TCGA-AR-A255-01A 46 5'UTR-5'UTR Inter-chr q24.33 q13.33 78579 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-E2-A155-01A 15 5'UTR-5'UTR Inter-chr q24.33 q13.33 78580 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-E2-A155-01A 15 5'UTR-5'UTR Inter-chr q24.33 q13.33 78581 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A2-A0CU-01A 46 5'UTR-5'UTR Inter-chr q24.33 q13.33 78582 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-D8-A27N-01A 34 5'UTR-5'UTR Inter-chr q24.33 q13.33 78583 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402490 - RPS11 chr19 50000814 + Exonic hg19 BRCA TCGA-D8-A27N-01A 34 5'UTR-5'UTR Inter-chr q24.33 q13.33 78584 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FN1-APOD FN1 chr2 216232692 + APOD chr3 195295693 - Exonic hg19 BRCA TCGA-AN-A0FZ-01A 22 3'UTR-3'UTR Inter-chr q35 Oncogene q29 78585 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-B6-A0I1-01A 55 5'UTR-5'UTR Inter-chr q24.33 q13.33 78586 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-D8-A1XG-01A 45 5'UTR-5'UTR Inter-chr q24.33 q13.33 78587 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402503 - RPS11 chr19 50001188 + Exonic hg19 BRCA TCGA-A8-A075-01A 54 5'UTR-5'UTR Inter-chr q24.33 q13.33 78588 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 49999682 + Exonic hg19 BRCA TCGA-BH-A0B8-01A 19 5'UTR-5'UTR Inter-chr q24.33 q13.33 78589 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402285 - RPS11 chr19 50000534 + Exonic hg19 BRCA TCGA-AO-A03T-01A 41 5'UTR-5'UTR Inter-chr q24.33 q13.33 78590 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402285 - RPS11 chr19 50000534 + Exonic hg19 BRCA TCGA-LD-A66U-01A 41 5'UTR-5'UTR Inter-chr q24.33 q13.33 78591 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-C8-A12K-01A 57 5'UTR-5'UTR Inter-chr q24.33 q13.33 78592 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-E2-A14X-01A 45 5'UTR-5'UTR Inter-chr q24.33 q13.33 78593 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-C8-A12K-01A 57 5'UTR-5'UTR Inter-chr q24.33 q13.33 78594 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COG1-FAM104A COG1 chr17 71204423 + FAM104A chr17 71204652 - Exonic hg19 BRCA TCGA-AO-A03T-01A 15 CDS-3'UTR Intra-chr q25.1 q25.1 78595 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A2-A0D2-01A 96 5'UTR-5'UTR Inter-chr q24.33 q13.33 78596 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A8-A09B-01A 31 5'UTR-5'UTR Inter-chr q24.33 q13.33 78597 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AR-A0TR-01A 31 5'UTR-5'UTR Inter-chr q24.33 q13.33 78598 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-E9-A1RH-11A 24 5'UTR-5'UTR Inter-chr q24.33 q13.33 78599 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402419 - RPS11 chr19 50000533 + Exonic hg19 BRCA TCGA-AC-A3YJ-01A 47 5'UTR-5'UTR Inter-chr q24.33 q13.33 78600 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-AC-A3YJ-01A 47 5'UTR-5'UTR Inter-chr q24.33 q13.33 78601 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786619 - DHPS chr19 12786871 - Exonic hg19 BRCA TCGA-LD-A7W6-01A 30 5'UTR-CDS Intra-chr p13.13 p13.13 78602 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402285 - RPS11 chr19 50000533 + Exonic hg19 BRCA TCGA-B6-A0RM-01A 36 5'UTR-5'UTR Inter-chr q24.33 q13.33 78603 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-BH-A1FH-11B 68 5'UTR-5'UTR Inter-chr q24.33 q13.33 78604 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-D8-A1Y0-01A 22 5'UTR-5'UTR Inter-chr q24.33 q13.33 78605 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402500 - RPS11 chr19 50001191 + Exonic hg19 BRCA TCGA-BH-A18K-01A 19 5'UTR-5'UTR Inter-chr q24.33 q13.33 78606 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A8-A097-01A 19 5'UTR-5'UTR Inter-chr q24.33 q13.33 78607 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AC-A2FF-11A 52 5'UTR-5'UTR Inter-chr q24.33 q13.33 78608 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-BH-A1EN-01A 20 5'UTR-5'UTR Inter-chr q24.33 q13.33 78609 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-AC-A2FF-11A 52 5'UTR-5'UTR Inter-chr q24.33 q13.33 78610 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-BH-A0BP-01A 40 5'UTR-5'UTR Inter-chr q24.33 q13.33 78611 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402285 - RPS11 chr19 50000534 + Exonic hg19 BRCA TCGA-C8-A27B-01A 18 5'UTR-5'UTR Inter-chr q24.33 q13.33 78612 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402285 - RPS11 chr19 50000534 + Exonic hg19 BRCA TCGA-D8-A1XY-01A 24 5'UTR-5'UTR Inter-chr q24.33 q13.33 78613 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A2-A0SX-01A 29 5'UTR-5'UTR Inter-chr q24.33 q13.33 78614 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-BH-A1F0-01A 64 5'UTR-5'UTR Inter-chr q24.33 q13.33 78615 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402494 - RPS11 chr19 50000533 + Exonic hg19 BRCA TCGA-C8-A27B-01A 18 5'UTR-5'UTR Inter-chr q24.33 q13.33 78616 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COG1-FAM104A COG1 chr17 71204055 - FAM104A chr17 71204721 - Exonic hg19 BRCA TCGA-A2-A0SX-01A 9 CDS-3'UTR Intra-chr q25.1 q25.1 78617 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-E2-A1IN-01A 33 5'UTR-5'UTR Inter-chr q24.33 q13.33 78618 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-E9-A247-01A 47 5'UTR-5'UTR Inter-chr q24.33 q13.33 78619 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-E2-A1IN-01A 33 5'UTR-5'UTR Inter-chr q24.33 q13.33 78620 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A1-A0SF-01A 57 5'UTR-5'UTR Inter-chr q24.33 q13.33 78621 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402415 - RPS11 chr19 49999668 + Exonic hg19 BRCA TCGA-AC-A3EH-01A 77 5'UTR-5'UTR Inter-chr q24.33 q13.33 78622 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402415 - RPS11 chr19 49999668 + Exonic hg19 BRCA TCGA-EW-A6S9-01A 50 5'UTR-5'UTR Inter-chr q24.33 q13.33 78623 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-C8-A12T-01A 97 5'UTR-5'UTR Inter-chr q24.33 q13.33 78624 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-S3-A6ZH-01A 19 5'UTR-5'UTR Inter-chr q24.33 q13.33 78625 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402500 - RPS11 chr19 50001185 + Exonic hg19 BRCA TCGA-AR-A2LE-01A 49 5'UTR-5'UTR Inter-chr q24.33 q13.33 78626 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A8-A091-01A 23 5'UTR-5'UTR Inter-chr q24.33 q13.33 78627 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AO-A1KS-01A 43 5'UTR-5'UTR Inter-chr q24.33 q13.33 78628 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-D8-A27P-01A 18 5'UTR-5'UTR Inter-chr q24.33 q13.33 78629 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402419 - RPS11 chr19 50000533 + Exonic hg19 BRCA TCGA-E2-A106-01A 12 5'UTR-5'UTR Inter-chr q24.33 q13.33 78630 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-E2-A1L9-01A 46 5'UTR-5'UTR Inter-chr q24.33 q13.33 78631 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380959 - TBC1D17 chr19 50383570 - Exonic hg19 BRCA TCGA-A2-A0T6-01A 8 5'UTR-CDS Intra-chr q13.33 q13.33 78632 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COL3A1-THBS2 COL3A1 chr2 189877212 - THBS2 chr6 169617465 - Exonic hg19 BRCA TCGA-E9-A22E-01A 5 3'UTR-3'UTR Inter-chr q32.2 q27 78633 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SPARC-FN1 SPARC chr5 151043037 - FN1 chr2 216230297 - Exonic hg19 BRCA TCGA-AC-A23E-01A 10 3'UTR-3'UTR Inter-chr q33.1 Tumor suppressor gene q35 Oncogene 78634 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ENAH-COL1A1 ENAH chr1 225707127 + COL1A1 chr17 48261903 - Exonic hg19 BRCA TCGA-AC-A23E-01A 2 CDS-3'UTR Inter-chr q42.12 q21.33 Oncogene 78635 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-EW-A1OY-01A 67 5'UTR-5'UTR Inter-chr q24.33 q13.33 78636 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-BH-A0DG-01A 43 5'UTR-5'UTR Inter-chr q24.33 q13.33 78637 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A1-A0SP-01A 70 5'UTR-5'UTR Inter-chr q24.33 q13.33 78638 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-D8-A27I-01A 33 5'UTR-5'UTR Inter-chr q24.33 q13.33 78639 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-AR-A24L-01A 30 5'UTR-5'UTR Inter-chr q24.33 q13.33 78640 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AN-A0FN-01A 82 5'UTR-5'UTR Inter-chr q24.33 q13.33 78641 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-EW-A1OV-01A 45 5'UTR-5'UTR Inter-chr q24.33 q13.33 78642 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2017975 + COL1A1 chr17 48261777 - Exonic hg19 BRCA TCGA-AN-A0FN-01A 14 3'UTR-3'UTR Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 78643 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2018680 + COL1A1 chr17 48262481 - Exonic hg19 BRCA TCGA-AN-A0FN-01A 14 3'UTR-3'UTR Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 78644 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 49999683 + Exonic hg19 BRCA TCGA-BH-A0BV-11A 41 5'UTR-5'UTR Inter-chr q24.33 q13.33 78645 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-BH-A0BV-11A 41 5'UTR-5'UTR Inter-chr q24.33 q13.33 78646 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-D8-A1X6-01A 58 5'UTR-5'UTR Inter-chr q24.33 q13.33 78647 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-BH-A0BV-11A 41 5'UTR-5'UTR Inter-chr q24.33 q13.33 78648 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402502 - RPS11 chr19 50001203 + Exonic hg19 BRCA TCGA-E9-A1NG-01A 38 5'UTR-5'UTR Inter-chr q24.33 q13.33 78649 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AC-A23H-01A 35 5'UTR-5'UTR Inter-chr q24.33 q13.33 78650 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-E2-A1IF-01A 63 5'UTR-5'UTR Inter-chr q24.33 q13.33 78651 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-D8-A1JA-01A 35 5'UTR-5'UTR Inter-chr q24.33 q13.33 78652 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-E9-A1R7-11A 12 5'UTR-5'UTR Inter-chr q24.33 q13.33 78653 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402503 - RPS11 chr19 50001191 + Exonic hg19 BRCA TCGA-D8-A1JT-01A 33 5'UTR-5'UTR Inter-chr q24.33 q13.33 78654 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 39 5'UTR-5'UTR Inter-chr q24.33 q13.33 78655 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AR-A254-01A 83 5'UTR-5'UTR Inter-chr q24.33 q13.33 78656 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-A7-A13G-11A 60 5'UTR-5'UTR Inter-chr q24.33 q13.33 78657 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402285 - RPS11 chr19 50000535 + Exonic hg19 BRCA TCGA-C8-A8HQ-01A 19 5'UTR-5'UTR Inter-chr q24.33 q13.33 78658 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-D8-A1XC-01A 37 5'UTR-5'UTR Inter-chr q24.33 q13.33 78659 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COG1-FAM104A COG1 chr17 71204420 + FAM104A chr17 71204655 - Exonic hg19 BRCA TCGA-D8-A1JP-01A 8 CDS-3'UTR Intra-chr q25.1 q25.1 78660 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A8-A085-01A 76 5'UTR-5'UTR Inter-chr q24.33 q13.33 78661 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A8-A0A2-01A 28 5'UTR-5'UTR Inter-chr q24.33 q13.33 78662 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-AR-A0TS-01A 42 5'UTR-5'UTR Inter-chr q24.33 q13.33 78663 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-E9-A1RI-11A 62 5'UTR-5'UTR Inter-chr q24.33 q13.33 78664 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A8-A06O-01A 26 5'UTR-5'UTR Inter-chr q24.33 q13.33 78665 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-E9-A243-01A 48 5'UTR-5'UTR Inter-chr q24.33 q13.33 78666 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-D8-A1JB-01A 64 5'UTR-5'UTR Inter-chr q24.33 q13.33 78667 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402500 - RPS11 chr19 50001191 + Exonic hg19 BRCA TCGA-D8-A1JD-01A 23 5'UTR-5'UTR Inter-chr q24.33 q13.33 78668 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-E9-A1N5-11A 67 5'UTR-5'UTR Inter-chr q24.33 q13.33 78669 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A2-A0T2-01A 33 5'UTR-5'UTR Inter-chr q24.33 q13.33 78670 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-D8-A1Y1-01A 26 5'UTR-5'UTR Inter-chr q24.33 q13.33 78671 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-LL-A7T0-01A 41 5'UTR-5'UTR Inter-chr q24.33 q13.33 78672 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402497 - RPS11 chr19 50000535 + Exonic hg19 BRCA TCGA-D8-A1Y1-01A 26 5'UTR-5'UTR Inter-chr q24.33 q13.33 78673 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-D8-A27T-01A 53 5'UTR-5'UTR Inter-chr q24.33 q13.33 78674 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-GM-A2DD-01A 69 5'UTR-5'UTR Inter-chr q24.33 q13.33 78675 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-E2-A14W-01A 37 5'UTR-5'UTR Inter-chr q24.33 q13.33 78676 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-BH-A1FE-01A 29 5'UTR-5'UTR Inter-chr q24.33 q13.33 78677 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-E9-A1R6-01A 50 5'UTR-5'UTR Inter-chr q24.33 q13.33 78678 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-E9-A245-01A 47 5'UTR-5'UTR Inter-chr q24.33 q13.33 78679 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 BRCA TCGA-BH-A1FE-01A 29 5'UTR-5'UTR Inter-chr q24.33 q13.33 78680 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402500 - RPS11 chr19 50001203 + Exonic hg19 BRCA TCGA-E2-A2P6-01A 25 5'UTR-5'UTR Inter-chr q24.33 q13.33 78681 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AIMP2-EIF2AK1 AIMP2 chr7 6063022 + EIF2AK1 chr7 6063468 - Exonic hg19 BRCA TCGA-BH-A1FE-01A 13 CDS-3'UTR Intra-chr p22.1 Tumor suppressor gene p22.1 78682 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402285 - RPS11 chr19 50000534 + Exonic hg19 BRCA TCGA-D8-A1J9-01A 27 5'UTR-5'UTR Inter-chr q24.33 q13.33 78683 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402285 - RPS11 chr19 50000534 + Exonic hg19 BRCA TCGA-GM-A2DF-01A 31 5'UTR-5'UTR Inter-chr q24.33 q13.33 78684 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-D8-A1JK-01A 22 5'UTR-5'UTR Inter-chr q24.33 q13.33 78685 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-XX-A899-01A 47 5'UTR-5'UTR Inter-chr q24.33 q13.33 78686 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 BRCA TCGA-A8-A08R-01A 20 5'UTR-5'UTR Inter-chr q24.33 q13.33 78687 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402490 - RPS11 chr19 50001188 + Exonic hg19 BRCA TCGA-E2-A10B-01A 22 5'UTR-5'UTR Inter-chr q24.33 q13.33 78688 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-18-3417-01A 39 5'UTR-5'UTR Inter-chr q24.33 q13.33 78689 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-21-1079-01A 21 5'UTR-5'UTR Inter-chr q24.33 q13.33 78690 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUSC TCGA-43-6773-11A 15 5'UTR-5'UTR Inter-chr q24.33 q13.33 78691 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAB9A-TRAPPC2 RAB9A chrX 13722020 + TRAPPC2 chrX 13738100 - Exonic hg19 LUSC TCGA-63-A5MY-01A 54 5'UTR-5'UTR Intra-chr p22.2 p22.2 Seq+ 78692 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-18-3406-01A 98 5'UTR-5'UTR Inter-chr q24.33 q13.33 78693 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-66-2782-01A 96 5'UTR-5'UTR Inter-chr q24.33 q13.33 78694 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-79-5596-01A 44 5'UTR-5'UTR Inter-chr q24.33 q13.33 78695 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUSC TCGA-18-3406-01A 98 5'UTR-5'UTR Inter-chr q24.33 q13.33 78696 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PAK2-LOC646214 PAK2 chr3 196533556 + LOC646214 chr15 21937539 + Exonic hg19 LUSC TCGA-56-7223-01A 4 CDS-3'UTR Inter-chr q29 STE:STE20 78697 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKT1S1-TBC1D17 AKT1S1 chr19 50380957 - TBC1D17 chr19 50381777 + Exonic hg19 LUSC TCGA-77-8153-01A 7 5'UTR-CDS Intra-chr q13.33 q13.33 78698 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-18-3410-01A 25 5'UTR-5'UTR Inter-chr q24.33 q13.33 78699 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-22-4604-01A 77 5'UTR-5'UTR Inter-chr q24.33 q13.33 78700 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-22-5482-11A 58 5'UTR-5'UTR Inter-chr q24.33 q13.33 78701 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-63-5128-01A 38 5'UTR-5'UTR Inter-chr q24.33 q13.33 78702 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PAK2-LOC646214 PAK2 chr3 196533498 - LOC646214 chr15 21937708 - Exonic hg19 LUSC TCGA-46-3768-01A 7 CDS-3'UTR Inter-chr q29 STE:STE20 78703 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32150111 + SFTPA2 chr10 81316902 - Exonic hg19 LUSC TCGA-33-4587-11A 8 3'UTR-3'UTR Inter-chr q22.3 78704 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32151526 + SFTPA2 chr10 81316920 - Exonic hg19 LUSC TCGA-33-4587-11A 8 3'UTR-3'UTR Inter-chr q22.3 78705 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32151760 + SFTPA2 chr10 81316256 - Exonic hg19 LUSC TCGA-22-5482-11A 28 3'UTR-3'UTR Inter-chr q22.3 78706 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 49999668 + Exonic hg19 LUSC TCGA-56-7822-01A 28 5'UTR-5'UTR Inter-chr q24.33 q13.33 78707 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-60-2715-01A 72 5'UTR-5'UTR Inter-chr q24.33 q13.33 78708 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUSC TCGA-56-8083-11A 72 5'UTR-5'UTR Inter-chr q24.33 q13.33 78709 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUSC TCGA-68-7756-01A 33 5'UTR-5'UTR Inter-chr q24.33 q13.33 78710 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402495 - RPS11 chr19 50001187 + Exonic hg19 LUSC TCGA-43-7658-01A 35 5'UTR-5'UTR Inter-chr q24.33 q13.33 78711 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-18-3411-01A 68 5'UTR-5'UTR Inter-chr q24.33 q13.33 78712 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-18-4086-01A 19 5'UTR-5'UTR Inter-chr q24.33 q13.33 78713 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-34-2608-01A 57 5'UTR-5'UTR Inter-chr q24.33 q13.33 78714 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-39-5019-01A 60 5'UTR-5'UTR Inter-chr q24.33 q13.33 78715 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-21-1082-01A 27 5'UTR-5'UTR Inter-chr q24.33 q13.33 78716 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-39-5024-01A 72 5'UTR-5'UTR Inter-chr q24.33 q13.33 78717 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-43-8116-01A 76 5'UTR-5'UTR Inter-chr q24.33 q13.33 78718 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-43-8118-01A 21 5'UTR-5'UTR Inter-chr q24.33 q13.33 78719 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-22-5483-01A 41 5'UTR-5'UTR Inter-chr q24.33 q13.33 78720 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUSC TCGA-77-8131-01A 80 5'UTR-5'UTR Inter-chr q24.33 q13.33 78721 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-22-4601-01A 14 5'UTR-5'UTR Inter-chr q24.33 q13.33 78722 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-60-2712-01A 87 5'UTR-5'UTR Inter-chr q24.33 q13.33 78723 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-90-6837-11A 47 5'UTR-5'UTR Inter-chr q24.33 q13.33 78724 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32150149 + SFTPA2 chr10 81319169 - Exonic hg19 LUSC TCGA-90-6837-11A 13 In-Frame Inter-chr q22.3 78725 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32152002 + SFTPA2 chr10 81316198 - Exonic hg19 LUSC TCGA-22-5489-11A 16 3'UTR-3'UTR Inter-chr q22.3 78726 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-22-5479-01A 35 5'UTR-5'UTR Inter-chr q24.33 q13.33 78727 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402491 - RPS11 chr19 50000814 + Exonic hg19 LUSC TCGA-NC-A5HT-01A 30 5'UTR-5'UTR Inter-chr q24.33 q13.33 78728 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32151760 + SFTPA2 chr10 81316256 - Exonic hg19 LUSC TCGA-56-7580-11A 6 3'UTR-3'UTR Inter-chr q22.3 78729 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 49999682 + Exonic hg19 LUSC TCGA-77-A5FZ-01A 19 5'UTR-5'UTR Inter-chr q24.33 q13.33 78730 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-43-6647-01A 33 5'UTR-5'UTR Inter-chr q24.33 q13.33 78731 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUSC TCGA-56-8503-01A 64 5'UTR-5'UTR Inter-chr q24.33 q13.33 78732 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TRAF3-CDC42BPB TRAF3 chr14 103283952 + CDC42BPB chr14 103404440 + Exonic hg19 LUSC TCGA-56-8503-01A 88 5'UTR-CDS Intra-chr q32.32 q32.32 Seq+ 78733 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TRAF3-CDC42BPB TRAF3 chr14 103285797 + CDC42BPB chr14 103404440 + Exonic hg19 LUSC TCGA-56-8503-01A 88 5'UTR-CDS Intra-chr q32.32 q32.32 Seq+ 78734 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165737 - PPP1CA chr11 67166308 - Exonic hg19 LUSC TCGA-O2-A52V-01A 4 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 78735 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-18-3414-01A 43 5'UTR-5'UTR Inter-chr q24.33 q13.33 78736 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-21-1070-01A 26 5'UTR-5'UTR Inter-chr q24.33 q13.33 78737 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-60-2724-01A 37 5'UTR-5'UTR Inter-chr q24.33 q13.33 78738 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUSC TCGA-21-1070-01A 26 5'UTR-5'UTR Inter-chr q24.33 q13.33 78739 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402285 - RPS11 chr19 49999667 + Exonic hg19 LUSC TCGA-O2-A52S-01A 56 5'UTR-5'UTR Inter-chr q24.33 q13.33 78740 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-22-4607-01A 20 5'UTR-5'UTR Inter-chr q24.33 q13.33 78741 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-66-2765-01A 61 5'UTR-5'UTR Inter-chr q24.33 q13.33 78742 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32151763 + SFTPA2 chr10 81316254 - Exonic hg19 LUSC TCGA-43-7657-11A 3 3'UTR-3'UTR Inter-chr q22.3 78743 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32152027 + SFTPA2 chr10 81316570 - Exonic hg19 LUSC TCGA-51-4079-11A 78 3'UTR-3'UTR Inter-chr q22.3 78744 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PAK2-LOC646214 PAK2 chr3 196533497 - LOC646214 chr15 21937710 - Exonic hg19 LUSC TCGA-60-2711-01A 5 CDS-3'UTR Inter-chr q29 STE:STE20 78745 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-63-7021-01A 24 5'UTR-5'UTR Inter-chr q24.33 q13.33 78746 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUSC TCGA-85-A4JB-01A 29 5'UTR-5'UTR Inter-chr q24.33 q13.33 78747 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32151764 + SFTPA2 chr10 81317844 - Exonic hg19 LUSC TCGA-22-5472-11A 30 In-Frame Inter-chr q22.3 78748 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32152003 + SFTPA2 chr10 81316197 - Exonic hg19 LUSC TCGA-43-6771-11A 21 3'UTR-3'UTR Inter-chr q22.3 78749 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 50000533 + Exonic hg19 LUSC TCGA-NC-A5HM-01A 26 5'UTR-5'UTR Inter-chr q24.33 q13.33 78750 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-85-8481-01A 33 5'UTR-5'UTR Inter-chr q24.33 q13.33 78751 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-98-A53B-01A 65 5'UTR-5'UTR Inter-chr q24.33 q13.33 78752 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUSC TCGA-98-A53B-01A 65 5'UTR-5'UTR Inter-chr q24.33 q13.33 78753 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUSC TCGA-77-8154-01A 68 5'UTR-5'UTR Inter-chr q24.33 q13.33 78754 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32151763 + SFTPA2 chr10 81316255 - Exonic hg19 LUSC TCGA-56-7731-11A 6 3'UTR-3'UTR Inter-chr q22.3 78755 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-98-A53J-01A 17 5'UTR-5'UTR Inter-chr q24.33 q13.33 78756 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402500 - RPS11 chr19 50000731 + Exonic hg19 LUSC TCGA-66-2792-01A 43 5'UTR-5'UTR Inter-chr q24.33 q13.33 78757 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32149373 + SFTPA2 chr10 81316256 - Exonic hg19 LUSC TCGA-90-7767-11A 12 3'UTR-3'UTR Inter-chr q22.3 78758 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32151761 + SFTPA2 chr10 81316256 - Exonic hg19 LUSC TCGA-92-7340-11A 18 3'UTR-3'UTR Inter-chr q22.3 78759 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AIMP2-EIF2AK1 AIMP2 chr7 6063440 - EIF2AK1 chr7 6063978 - Exonic hg19 LUSC TCGA-43-3394-11A 11 3'UTR-3'UTR Intra-chr p22.1 Tumor suppressor gene p22.1 78760 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32151763 + SFTPA2 chr10 81316253 - Exonic hg19 LUSC TCGA-22-4593-11A 26 3'UTR-3'UTR Inter-chr q22.3 78761 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-56-8629-01A 77 5'UTR-5'UTR Inter-chr q24.33 q13.33 78762 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165878 - PPP1CA chr11 67166459 - Exonic hg19 LUSC TCGA-66-2759-01A 12 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 78763 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-22-4596-01A 20 5'UTR-5'UTR Inter-chr q24.33 q13.33 78764 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-34-5239-01A 68 5'UTR-5'UTR Inter-chr q24.33 q13.33 78765 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-85-8048-01A 33 5'UTR-5'UTR Inter-chr q24.33 q13.33 78766 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32151761 + SFTPA2 chr10 81316255 - Exonic hg19 LUSC TCGA-77-7337-11A 27 3'UTR-3'UTR Inter-chr q22.3 78767 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-COL1A1 H19 chr11 2019005 + COL1A1 chr17 48267085 - Exonic hg19 LUSC TCGA-85-7697-01A 12 3'UTR-CDS Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 78768 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-22-5489-01A 95 5'UTR-5'UTR Inter-chr q24.33 q13.33 78769 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUSC TCGA-63-6202-01A 98 5'UTR-5'UTR Inter-chr q24.33 q13.33 78770 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32148973 + SFTPA2 chr10 81316575 - Exonic hg19 LUSC TCGA-22-5471-11A 30 3'UTR-3'UTR Inter-chr q22.3 78771 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32148985 + SFTPA2 chr10 81319114 - Exonic hg19 LUSC TCGA-22-5471-11A 30 In-Frame Inter-chr q22.3 78772 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32149174 + SFTPA2 chr10 81317240 - Exonic hg19 LUSC TCGA-22-5471-11A 31 Out-of-Frame Inter-chr q22.3 78773 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-33-4532-01A 17 5'UTR-5'UTR Inter-chr q24.33 q13.33 78774 ChimerSeq Tophat-Fusion TCGA_RNA-Seq H19-LAMA5 H19 chr11 2018318 - LAMA5 chr20 60885115 - Exonic hg19 LUSC TCGA-39-5040-01A 9 3'UTR-CDS Inter-chr p15.5 Tumor suppressor gene q13.33 78775 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32149382 + SFTPA2 chr10 81316248 - Exonic hg19 LUSC TCGA-56-8201-11A 17 3'UTR-3'UTR Inter-chr q22.3 78776 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUSC TCGA-66-2788-01A 59 5'UTR-5'UTR Inter-chr q24.33 q13.33 78777 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-22-5482-01A 24 5'UTR-5'UTR Inter-chr q24.33 q13.33 78778 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUSC TCGA-98-A53H-01A 61 5'UTR-5'UTR Inter-chr q24.33 q13.33 78779 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165679 - PPP1CA chr11 67166228 - Exonic hg19 LUSC TCGA-77-8148-01A 7 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 78780 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD9A-PPP1CA RAD9A chr11 67165715 - PPP1CA chr11 67166251 - Exonic hg19 LUSC TCGA-66-2800-01A 6 3'UTR-CDS Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 78781 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786614 - DHPS chr19 12787966 - Exonic hg19 LUSC TCGA-96-7545-01A 9 5'UTR-CDS Intra-chr p13.13 p13.13 78782 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786617 - DHPS chr19 12786854 - Exonic hg19 LUSC TCGA-56-A4BX-01A 13 5'UTR-CDS Intra-chr p13.13 p13.13 78783 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402284 - RPS11 chr19 49999668 + Exonic hg19 LUSC TCGA-63-A5MJ-01A 33 5'UTR-5'UTR Inter-chr q24.33 q13.33 78784 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-22-0940-01A 71 5'UTR-5'UTR Inter-chr q24.33 q13.33 78785 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-33-6737-01A 82 5'UTR-5'UTR Inter-chr q24.33 q13.33 78786 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-60-2707-01A 37 5'UTR-5'UTR Inter-chr q24.33 q13.33 78787 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUSC TCGA-68-A59J-01A 23 5'UTR-5'UTR Inter-chr q24.33 q13.33 78788 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUSC TCGA-85-8070-01A 89 5'UTR-5'UTR Inter-chr q24.33 q13.33 78789 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32148861 - SFTPA2 chr10 81316258 - Exonic hg19 LUSC TCGA-51-4080-11A 28 3'UTR-3'UTR Inter-chr q22.3 78790 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32148954 - SFTPA2 chr10 81317853 - Exonic hg19 LUSC TCGA-51-4080-11A 28 In-Frame Inter-chr q22.3 78791 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32150640 - SFTPA2 chr10 81316255 - Exonic hg19 LUSC TCGA-51-4080-11A 29 3'UTR-3'UTR Inter-chr q22.3 78792 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402282 - RPS11 chr19 49999699 + Exonic hg19 LUSC TCGA-56-A5DS-01A 7 5'UTR-5'UTR Inter-chr q24.33 q13.33 78793 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-34-5231-01A 60 5'UTR-5'UTR Inter-chr q24.33 q13.33 78794 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUSC TCGA-63-7023-01A 44 5'UTR-5'UTR Inter-chr q24.33 q13.33 78795 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUSC TCGA-96-8170-01A 81 5'UTR-5'UTR Inter-chr q24.33 q13.33 78796 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-22-4595-01A 10 5'UTR-5'UTR Inter-chr q24.33 q13.33 78797 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-43-7657-01A 44 5'UTR-5'UTR Inter-chr q24.33 q13.33 78798 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-56-5897-01A 35 5'UTR-5'UTR Inter-chr q24.33 q13.33 78799 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-92-7341-01A 42 5'UTR-5'UTR Inter-chr q24.33 q13.33 78800 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402500 - RPS11 chr19 50001191 + Exonic hg19 LUSC TCGA-85-8071-01A 26 5'UTR-5'UTR Inter-chr q24.33 q13.33 78801 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32151399 + SFTPA2 chr10 81316146 - Exonic hg19 LUSC TCGA-43-5670-11A 3 3'UTR-3'UTR Inter-chr q22.3 78802 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32151760 + SFTPA2 chr10 81316256 - Exonic hg19 LUSC TCGA-43-5670-11A 3 3'UTR-3'UTR Inter-chr q22.3 78803 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-43-5668-01A 92 5'UTR-5'UTR Inter-chr q24.33 q13.33 78804 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-66-2742-01A 19 5'UTR-5'UTR Inter-chr q24.33 q13.33 78805 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32151756 + SFTPA2 chr10 81316174 - Exonic hg19 LUSC TCGA-60-2709-11A 18 3'UTR-3'UTR Inter-chr q22.3 78806 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-43-6143-11A 43 5'UTR-5'UTR Inter-chr q24.33 q13.33 78807 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-60-2698-01A 70 5'UTR-5'UTR Inter-chr q24.33 q13.33 78808 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUSC TCGA-22-4609-11A 40 5'UTR-5'UTR Inter-chr q24.33 q13.33 78809 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUSC TCGA-51-4081-11A 96 5'UTR-5'UTR Inter-chr q24.33 q13.33 78810 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32148837 + SFTPA2 chr10 81316263 - Exonic hg19 LUSC TCGA-22-4609-11A 12 3'UTR-3'UTR Inter-chr q22.3 78811 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32150076 + SFTPA2 chr10 81316048 - Exonic hg19 LUSC TCGA-43-6647-11A 31 3'UTR-3'UTR Inter-chr q22.3 78812 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32151763 + SFTPA2 chr10 81316202 - Exonic hg19 LUSC TCGA-22-4609-11A 12 3'UTR-3'UTR Inter-chr q22.3 78813 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32151765 + SFTPA2 chr10 81317003 - Exonic hg19 LUSC TCGA-43-6647-11A 31 Out-of-Frame Inter-chr q22.3 78814 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-22-5481-11A 54 5'UTR-5'UTR Inter-chr q24.33 q13.33 78815 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-22-5492-01A 49 5'UTR-5'UTR Inter-chr q24.33 q13.33 78816 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-77-8007-01A 25 5'UTR-5'UTR Inter-chr q24.33 q13.33 78817 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-85-6175-01A 31 5'UTR-5'UTR Inter-chr q24.33 q13.33 78818 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUSC TCGA-22-5492-01A 49 5'UTR-5'UTR Inter-chr q24.33 q13.33 78819 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AGER-SFTPA2 AGER chr6 32148897 - SFTPA2 chr10 81319111 + Exonic hg19 LUSC TCGA-22-5491-11A 18 5'UTR-CDS Inter-chr q22.3 78820 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402413 - RPS11 chr19 50000532 + Exonic hg19 LUSC TCGA-34-5241-01A 83 5'UTR-5'UTR Inter-chr q24.33 q13.33 78821 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GOLGA3-RPS11 GOLGA3 chr12 133402492 - RPS11 chr19 50000813 + Exonic hg19 LUSC TCGA-63-A5MB-01A 42 5'UTR-5'UTR Inter-chr q24.33 q13.33 78822 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSG101-YWHAB TSG101 chr11 18512525 + YWHAB chr20 43530383 + Exonic hg19 LUAD TCGA-55-8511-01A 4 In-Frame Inter-chr p15.1 Tumor suppressor gene q13.12 78823 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HIF1A-PRKCH HIF1A chr14 62211426 + PRKCH chr14 61968341 + Exonic hg19 LUAD TCGA-44-2668-01B 9 Out-of-Frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 Seq+ 78824 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HIF1A-PRKCH HIF1A chr14 62207905 + PRKCH chr14 61995792 + Exonic hg19 LUAD TCGA-44-2668-01B 32 In-Frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 Seq+ 78825 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HIF1A-PRKCH HIF1A chr14 62207905 + PRKCH chr14 61991769 + Exonic hg19 LUAD TCGA-44-2668-01B 32 Out-of-Frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 Seq+ 78826 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AIMP2-EIF2AK1 AIMP2 chr7 6063290 - EIF2AK1 chr7 6064368 - Exonic hg19 LUAD TCGA-64-5774-01A 4 Out-of-Frame Intra-chr p22.1 Tumor suppressor gene p22.1 78827 ChimerSeq Tophat-Fusion TCGA_RNA-Seq C10orf11-KCNMA1 C10orf11 chr10 77818538 + KCNMA1 chr10 78877778 + Exonic hg19 LUAD TCGA-44-7660-01A 3 Out-of-Frame Intra-chr q22.3 78828 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PAPOLA-AK7 PAPOLA chr14 97022749 + AK7 chr14 96904171 + Exonic hg19 LUAD TCGA-55-8094-01A 26 In-Frame Intra-chr q32.2 q32.2 Seq+ 78829 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TF-ALB TF chr3 133485222 - ALB chr4 74279261 + Exonic hg19 LUAD TCGA-69-8255-01A 27 Out-of-Frame Inter-chr q22.1 q13.3 78830 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TF-ALB TF chr3 133478016 - ALB chr4 74280751 + Exonic hg19 LUAD TCGA-69-8255-01A 24 Out-of-Frame Inter-chr q22.1 q13.3 78831 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HIF1A-PRKCH HIF1A chr14 62207905 + PRKCH chr14 61995792 + Exonic hg19 LUAD TCGA-44-2668-01A 44 In-Frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 Seq+ 78832 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CLIP1-KNTC1 CLIP1 chr12 122837272 - KNTC1 chr12 123105248 - Exonic hg19 LUAD TCGA-49-4514-01A 16 Out-of-Frame Intra-chr q24.31 q24.31 Seq+ 78833 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MUSK-LPAR1 MUSK chr9 113547259 + LPAR1 chr9 113703700 + Exonic hg19 LUAD TCGA-86-8054-01A 2 Out-of-Frame Intra-chr q31.3 TK:Musk q31.3 78834 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUAD TCGA-44-7659-01A 237 Out-of-Frame Intra-chr q11.22 78835 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SCAMP4-COX8A SCAMP4 chr19 1918988 + COX8A chr11 63743696 + Exonic hg19 ACC TCGA-OR-A5JP-01A 284 Out-of-Frame Inter-chr p13.3 q13.1 Seq+ 78836 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DYNC1H1-PPL DYNC1H1 chr14 102458012 + PPL chr16 4975679 + Exonic hg19 ACC TCGA-OR-A5JP-01A 176 In-Frame Inter-chr q32.31 p13.3 78837 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SNHG19-USP49 SNHG19 chr16 2204859 - USP49 chr6 41767674 - Exonic hg19 ACC TCGA-OR-A5JF-01A 870 Out-of-Frame Inter-chr p13.3 p21.1 78838 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SNHG19-USP49 SNHG19 chr16 2205143 - USP49 chr6 41767675 - Exonic hg19 ACC TCGA-OR-A5JF-01A 870 Out-of-Frame Inter-chr p13.3 p21.1 78839 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LDLR-ZGLP1 LDLR chr19 11200290 + ZGLP1 chr19 10416627 - Exonic hg19 ACC TCGA-OR-A5JP-01A 8318 Out-of-Frame Intra-chr p13.2 p13.2 Transcription factor Seq+ 78840 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LDLR-ZGLP1 LDLR chr19 11200290 + ZGLP1 chr19 10419066 - Exonic hg19 ACC TCGA-OR-A5JP-01A 8318 Out-of-Frame Intra-chr p13.2 p13.2 Transcription factor Seq+ 78841 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LDLR-ZGLP1 LDLR chr19 11224437 + ZGLP1 chr19 10415883 - Exonic hg19 ACC TCGA-OR-A5JP-01A 122 In-Frame Intra-chr p13.2 p13.2 Transcription factor Seq+ 78842 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PAPSS2-MINPP1 PAPSS2 chr10 89487245 + MINPP1 chr10 89311838 + Exonic hg19 ACC TCGA-PK-A5HB-01A 262 Out-of-Frame Intra-chr q23.2 q23.2 Seq+ 78843 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AARS2-SPATS1 AARS2 chr6 44278730 - SPATS1 chr6 44328182 + Exonic hg19 ACC TCGA-OR-A5J8-01A 1161 In-Frame Intra-chr p21.1 p21.1 Seq+ 78844 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BAZ2A-PTGES3 BAZ2A chr12 56993747 - PTGES3 chr12 57068015 + Exonic hg19 ACC TCGA-OR-A5KX-01A 377 Out-of-Frame Intra-chr q13.3 Transcription factor q13.3 Seq+ 78845 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HMBOX1-KIF13B HMBOX1 chr8 28872638 + KIF13B chr8 29120496 + Exonic hg19 ACC TCGA-OR-A5JY-01A 169 Out-of-Frame Intra-chr p21.1 Transcription factor p12 78846 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EIF4H-AARS2 EIF4H chr7 73588771 + AARS2 chr6 44279999 - Exonic hg19 ACC TCGA-OR-A5J8-01A 522 Out-of-Frame Inter-chr q11.23 p21.1 Seq+ 78847 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RRP7A-PACSIN2 RRP7A chr22 42914010 - PACSIN2 chr22 43275174 - Exonic hg19 ACC TCGA-PK-A5HB-01A 129 In-Frame Intra-chr q13.2 q13.2 Seq+ 78848 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RRP7A-PACSIN2 RRP7A chr22 42915719 - PACSIN2 chr22 43275174 - Exonic hg19 ACC TCGA-PK-A5HB-01A 129 Out-of-Frame Intra-chr q13.2 q13.2 Seq+ 78849 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GANAB-LBHD1 GANAB chr11 62407098 - LBHD1 chr11 62430804 - Exonic hg19 ACC TCGA-OR-A5LD-01A 197 Out-of-Frame Intra-chr q12.3 Tumor suppressor gene q12.3 78850 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ADGRV1-CLPTM1L ADGRV1 chr5 90281338 + CLPTM1L chr5 1318567 - Exonic hg19 ACC TCGA-OR-A5JV-01A 164 Out-of-Frame Intra-chr q14.3 p15.33 Seq+ 78851 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LINC01089-HEXDC LINC01089 chr12 122239612 - HEXDC chr17 80398872 + Exonic hg19 ACC TCGA-OR-A5J1-01A 256 Out-of-Frame Inter-chr q24.31 q25.3 78852 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CLPTM1-KIAA1671 CLPTM1 chr19 45476442 + KIAA1671 chr22 25445330 - Exonic hg19 ACC TCGA-OR-A5J1-01A 250 In-Frame Inter-chr q13.32 q11.23 78853 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CLPTM1-KIAA1671 CLPTM1 chr19 45476466 + KIAA1671 chr22 25447996 - Exonic hg19 ACC TCGA-OR-A5J1-01A 233 In-Frame Inter-chr q13.32 q11.23 78854 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CLPTM1-KIAA1671 CLPTM1 chr19 45476965 + KIAA1671 chr22 25448011 - Exonic hg19 ACC TCGA-OR-A5J1-01A 233 Out-of-Frame Inter-chr q13.32 q11.23 78855 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERN1-TEX2 ERN1 chr17 62141345 - TEX2 chr17 62238292 - Exonic hg19 ACC TCGA-OR-A5K6-01A 229 In-Frame Intra-chr q23.3 q23.3 Seq+ 78856 ChimerSeq Tophat-Fusion TCGA_RNA-Seq QRICH1-ACOT2 QRICH1 chr3 49114141 - ACOT2 chr14 74041611 + Exonic hg19 ACC TCGA-OR-A5LO-01A 152 In-Frame Inter-chr p21.31 q24.3 Seq+ 78857 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CASK-LINC01284 CASK chrX 41598636 - LINC01284 chrX 50840895 - Exonic hg19 ACC TCGA-OR-A5KV-01A 130 Out-of-Frame Intra-chr p11.4 CAMK:CASK p11.22 78858 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPP1CB-BRE PPP1CB chr2 28975041 + BRE chr2 28521204 + Exonic hg19 ACC TCGA-OR-A5KY-01A 950 In-Frame Intra-chr p23.2 Seq+ 78859 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NCOR2-SCARB1 NCOR2 chr12 124882664 - SCARB1 chr12 125263131 - Exonic hg19 ACC TCGA-OR-A5KY-01A 339 Out-of-Frame Intra-chr q24.31 q24.31 Seq+ 78860 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CELF1-FNBP4 CELF1 chr11 47505004 - FNBP4 chr11 47741637 - Exonic hg19 ACC TCGA-OR-A5LO-01A 103 In-Frame Intra-chr p11.2 p11.2 Seq+ 78861 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRPF8-RAP1GAP2 PRPF8 chr17 1559685 - RAP1GAP2 chr17 2815879 - Exonic hg19 ACC TCGA-OR-A5KY-01A 115 Out-of-Frame Intra-chr p13.3 78862 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PDE6A-SLC26A2 PDE6A chr5 149294494 - SLC26A2 chr5 149357913 - Exonic hg19 ACC TCGA-OR-A5LO-01A 126 In-Frame Intra-chr q32 q32 78863 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FLVCR2-BATF FLVCR2 chr14 76045983 + BATF chr14 76012804 + Exonic hg19 ACC TCGA-OR-A5J7-01A 293 In-Frame Intra-chr q24.3 q24.3 Transcription factor Seq+ 78864 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HSD17B14-PLEKHA4 HSD17B14 chr19 49335922 - PLEKHA4 chr19 49344566 - Exonic hg19 ACC TCGA-OR-A5J7-01A 199 In-Frame Intra-chr q13.33 q13.33 Seq+ 78865 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HSD17B14-PLEKHA4 HSD17B14 chr19 49337532 - PLEKHA4 chr19 49344566 - Exonic hg19 ACC TCGA-OR-A5J7-01A 199 In-Frame Intra-chr q13.33 q13.33 Seq+ 78866 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRX-BLVRB PRX chr19 40904526 - BLVRB chr19 40953952 - Exonic hg19 ACC TCGA-OR-A5J7-01A 164 Out-of-Frame Intra-chr q13.2 q13.2 Seq+ 78867 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AP2A2-DRD4 AP2A2 chr11 977223 + DRD4 chr11 639432 + Exonic hg19 ACC TCGA-OR-A5J7-01A 118 In-Frame Intra-chr p15.5 p15.5 Seq+ 78868 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AP2A2-DRD4 AP2A2 chr11 977223 + DRD4 chr11 640400 + Exonic hg19 ACC TCGA-OR-A5J7-01A 118 Out-of-Frame Intra-chr p15.5 p15.5 Seq+ 78869 ChimerSeq Tophat-Fusion TCGA_RNA-Seq IFNAR1-IL10RB IFNAR1 chr21 34697435 + IL10RB chr21 34660408 + Exonic hg19 ACC TCGA-OR-A5J7-01A 126 In-Frame Intra-chr q22.11 q22.11 Seq+ 78870 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FGFR2-BICC1 FGFR2 chr10 123243213 - BICC1 chr10 60461831 + Exonic hg19 CHOL TCGA-ZH-A8Y5-01A 154 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q21.1 Seq+ 78871 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FGFR2-SHTN1 FGFR2 chr10 123243211 - SHTN1 chr10 118708507 - Exonic hg19 CHOL TCGA-W5-AA2Q-01A 973 Out-of-Frame Intra-chr q26.13 TK:FGFR Oncogene q25.3 Pub Seq+ 78872 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SHANK2-SPCS2 SHANK2 chr11 70505930 - SPCS2 chr11 74687903 + Exonic hg19 CHOL TCGA-W5-AA2X-01A 378 Out-of-Frame Intra-chr q13.4 q13.4 Seq+ 78873 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTPRK-SMNDC1 PTPRK chr6 128561179 - SMNDC1 chr10 112058547 - Exonic hg19 CHOL TCGA-ZH-A8Y1-01A 178 In-Frame Inter-chr Tumor suppressor gene q25.2 Seq+ 78874 ChimerSeq Tophat-Fusion TCGA_RNA-Seq XRCC6BP1-SRGAP1 XRCC6BP1 chr12 58335623 + SRGAP1 chr12 64238662 - Exonic hg19 CHOL TCGA-W5-AA2X-01A 114 In-Frame Intra-chr q14.2 78875 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FGFR2-BICC1 FGFR2 chr10 123243211 - BICC1 chr10 60566343 + Exonic hg19 CHOL TCGA-W5-AA2W-01A 632 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q21.1 Seq+ 78876 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FGFR2-CCDC186 FGFR2 chr10 123243211 - CCDC186 chr10 115910978 - Exonic hg19 CHOL TCGA-W5-AA2Z-01A 118 Out-of-Frame Intra-chr q26.13 TK:FGFR Oncogene q25.3 Seq+ 78877 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LOC101928809-CXCL9 LOC101928809 chr4 76924836 + CXCL9 chr4 76928655 - Exonic hg19 STAD TCGA-VR-AA7I-01A3 135 Out-of-Frame Intra-chr q21.1 78878 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LOC101928809-CXCL9 LOC101928809 chr4 76924846 + CXCL9 chr4 76928646 - Exonic hg19 STAD TCGA-VR-AA7I-01A3 135 Out-of-Frame Intra-chr q21.1 78879 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LOC101928809-CXCL9 LOC101928809 chr4 76924854 + CXCL9 chr4 76928655 - Exonic hg19 STAD TCGA-VR-AA7I-01A3 135 Out-of-Frame Intra-chr q21.1 78880 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LOC101928809-CXCL9 LOC101928809 chr4 76925988 + CXCL9 chr4 76928654 - Exonic hg19 STAD TCGA-VR-AA7I-01A3 135 Out-of-Frame Intra-chr q21.1 78881 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LOC101928809-CXCL9 LOC101928809 chr4 76926001 + CXCL9 chr4 76928636 - Exonic hg19 STAD TCGA-VR-AA7I-01A3 135 Out-of-Frame Intra-chr q21.1 78882 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SUPT6H-PROCA1 SUPT6H chr17 27017246 + PROCA1 chr17 27031860 - Exonic hg19 STAD TCGA-V5-A7RE-01A5 135 In-Frame Intra-chr q11.2 q11.2 Seq+ 78883 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SUPT6H-PROCA1 SUPT6H chr17 27017997 + PROCA1 chr17 27031885 - Exonic hg19 STAD TCGA-V5-A7RE-01A5 155 In-Frame Intra-chr q11.2 q11.2 Seq+ 78884 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SAXO1-PSMC3 SAXO1 chr9 19028011 - PSMC3 chr11 47441868 + Exonic hg19 STAD TCGA-2H-A9GL-01A8 234 Out-of-Frame Inter-chr p22.1 p11.2 78885 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134263531 + GFAP chr17 42988771 - Exonic hg19 LGG TCGA-HT-8111-01A 112 In-Frame Inter-chr q31.1 q21.31 78886 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TCF3-JAK2 TCF3 chr19 1615718 - JAK2 chr9 5112398 + Exonic hg19 LGG TCGA-HT-8111-01A 118 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p24.1 TK:JakA Oncogene 78887 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CYTH1-MACROD1 CYTH1 chr17 76690146 - MACROD1 chr11 63875439 - Exonic hg19 LGG TCGA-HT-A619-01A 104 Out-of-Frame Inter-chr q25.3 q13.1 Seq+ 78888 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CCNF-NOL4 CCNF chr16 2489826 + NOL4 chr18 31673560 - Exonic hg19 LGG TCGA-TM-A84I-01A 127 In-Frame Inter-chr p13.3 q12.1 Seq+ 78889 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MARCH9-SLCO1B1 2009_ 3_ 1_ chr12 58150866 + SLCO1B1 chr12 21325583 + Exonic hg19 LGG TCGA-TM-A84I-01A 168 In-Frame Intra-chr p12.1 Seq+ 78890 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EGFR-LINC01445 EGFR chr7 55240816 + LINC01445 chr7 54414986 + Exonic hg19 LGG TCGA-DU-A5TY-01A 3440 Out-of-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 78891 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF175-CYP27B1 ZNF175 chr19 52085134 + CYP27B1 chr12 58158332 - Exonic hg19 LGG TCGA-DU-7010-01A 440 Out-of-Frame Inter-chr q13.41 Transcription factor q14.1 Seq+ 78892 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TAX1BP1-LINC01446 TAX1BP1 chr7 27821242 + LINC01446 chr7 53754470 + Exonic hg19 LGG TCGA-DU-A5TY-01A 140 Out-of-Frame Intra-chr p15.2 p12.1 78893 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TAX1BP1-EGFR TAX1BP1 chr7 27826355 + EGFR chr7 55270317 - Exonic hg19 LGG TCGA-DU-A5TY-01A 533 In-Frame Intra-chr p15.2 p11.2 TK:EGFR Oncogene 78894 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RBPJ-LNX1 RBPJ chr4 26432533 + LNX1 chr4 54424040 + Exonic hg19 LGG TCGA-S9-A7IS-01A 256 In-Frame Intra-chr p15.2 Transcription factor q12 78895 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMPER-LOC401324 BMPER chr7 34010030 + LOC401324 chr7 35412818 - Exonic hg19 LGG TCGA-DU-A5TY-01A 102 CDS-5'UTR Intra-chr p14.3 78896 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMPER-LOC401324 BMPER chr7 34010030 + LOC401324 chr7 35415085 - Exonic hg19 LGG TCGA-DU-A5TY-01A 102 CDS-5'UTR Intra-chr p14.3 78897 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMPER-LOC401324 BMPER chr7 34010030 + LOC401324 chr7 35415543 - Exonic hg19 LGG TCGA-DU-A5TY-01A 102 CDS-5'UTR Intra-chr p14.3 78898 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CCT6A-LOC101927901 CCT6A chr7 56128632 + LOC101927901 chr12 68120382 + Exonic hg19 LGG TCGA-DU-A5TY-01A 179 Out-of-Frame Inter-chr p11.2 78899 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EP300-BCOR EP300 chr22 41573819 + BCOR chrX 39930411 - Exonic hg19 LGG TCGA-DU-6404-02A 138 Out-of-Frame Inter-chr q13.2 Oncogene p11.4 Oncogene Seq+ 78900 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EP300-BCOR EP300 chr22 41573819 + BCOR chrX 39930942 - Exonic hg19 LGG TCGA-DU-6404-02A 138 In-Frame Inter-chr q13.2 Oncogene p11.4 Oncogene Seq+ 78901 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DOT1L-TECR DOT1L chr19 2194575 + TECR chr19 14673336 + Exonic hg19 LGG TCGA-TM-A7CF-02A 158 In-Frame Intra-chr p13.3 Oncogene Transcription factor p13.12 Seq+ 78902 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DOT1L-TECR DOT1L chr19 2194575 + TECR chr19 14673336 + Exonic hg19 LGG TCGA-TM-A7CF-01A 118 In-Frame Intra-chr p13.3 Oncogene Transcription factor p13.12 Seq+ 78903 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BTBD2-OAS2 BTBD2 chr19 1993018 - OAS2 chr12 113424842 + Exonic hg19 LGG TCGA-FG-A4MU-01B 132 In-Frame Inter-chr p13.3 q24.13 Seq+ 78904 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134259671 + GFAP chr17 42984757 - Exonic hg19 LGG TCGA-RY-A843-01A 108 In-Frame Inter-chr q31.1 q21.31 78905 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF583-CCDC106 ZNF583 chr19 56925808 + CCDC106 chr19 56162648 + Exonic hg19 LGG TCGA-E1-A7YL-01A 308 In-Frame Intra-chr q13.43 Transcription factor q13.42 Seq+ 78906 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WHSC1-CPLX1 WHSC1 chr4 1920349 + CPLX1 chr4 786395 - Exonic hg19 LGG TCGA-DH-A669-02A 144 Out-of-Frame Intra-chr Oncogene p16.3 Seq+ 78907 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134263440 + GFAP chr17 42984755 - Exonic hg19 LGG TCGA-QH-A6X3-01A 175 Out-of-Frame Inter-chr q31.1 q21.31 78908 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EP300-BCOR EP300 chr22 41573819 + BCOR chrX 39930411 - Exonic hg19 LGG TCGA-DU-6404-01A 233 Out-of-Frame Inter-chr q13.2 Oncogene p11.4 Oncogene Seq+ 78909 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EP300-BCOR EP300 chr22 41573819 + BCOR chrX 39930942 - Exonic hg19 LGG TCGA-DU-6404-01A 233 In-Frame Inter-chr q13.2 Oncogene p11.4 Oncogene Seq+ 78910 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BCOR-L3MBTL2 BCOR chrX 39931601 - L3MBTL2 chr22 41605699 + Exonic hg19 LGG TCGA-DU-6404-01A 135 In-Frame Inter-chr p11.4 Oncogene q13.2 Seq+ 78911 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF713-LOC100996654 ZNF713 chr7 55979758 + LOC100996654 chr7 54872356 + Exonic hg19 LGG TCGA-HT-A5RA-01A 692 Out-of-Frame Intra-chr p11.2 Transcription factor 78912 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KDM5B-SYT14 KDM5B chr1 202721725 - SYT14 chr1 210267743 - Exonic hg19 LGG TCGA-CS-5395-01A 1412 Out-of-Frame Intra-chr q32.1 Transcription factor q32.2 78913 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PDGFB-DGCR2 PDGFB chr22 39626088 - DGCR2 chr22 19055737 - Exonic hg19 LGG TCGA-TM-A84J-01A 110 In-Frame Intra-chr q13.1 Oncogene q11.21 Seq+ 78914 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PDGFB-DGCR2 PDGFB chr22 39626088 - DGCR2 chr22 19077002 - Exonic hg19 LGG TCGA-TM-A84J-01A 277 In-Frame Intra-chr q13.1 Oncogene q11.21 Seq+ 78915 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SCD-SEC61A2 SCD chr10 102116520 + SEC61A2 chr10 12191593 + Exonic hg19 LGG TCGA-TM-A84J-01A 874 In-Frame Intra-chr q24.31 p14 Seq+ 78916 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACBD6-XPR1 ACBD6 chr1 180461403 - XPR1 chr1 180675582 - Exonic hg19 LGG TCGA-HW-7493-01A 118 Out-of-Frame Intra-chr q25.3 q25.3 78917 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EPHB2-NTRK1 EPHB2 chr1 23111568 + NTRK1 chr1 156843424 + Exonic hg19 LGG TCGA-TM-A84J-01A 148 In-Frame Intra-chr p36.12 Tumor suppressor gene q23.1 Oncogene Seq+ 78918 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DHTKD1-HSPA12A DHTKD1 chr10 12112883 + HSPA12A chr10 118451861 + Exonic hg19 LGG TCGA-TM-A84J-01A 131 In-Frame Intra-chr p14 q25.3 78919 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BICD1-SOX5 BICD1 chr12 32260477 + SOX5 chr12 23818497 - Exonic hg19 LGG TCGA-DU-7007-01A 144 In-Frame Intra-chr p11.21 p12.1 Transcription factor Seq+ 78920 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BICD1-SOX5 BICD1 chr12 32260477 + SOX5 chr12 23818500 - Exonic hg19 LGG TCGA-DU-7007-01A 144 In-Frame Intra-chr p11.21 p12.1 Transcription factor Seq+ 78921 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SNX15-C11orf85 SNX15 chr11 64795107 + C11orf85 chr11 64708117 - Exonic hg19 LGG TCGA-HT-7686-01A 106 Out-of-Frame Intra-chr q13.1 Seq+ 78922 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMCC2-SIX4 TMCC2 chr1 205211171 + SIX4 chr14 61186249 + Exonic hg19 LGG TCGA-TM-A7C3-01A 859 Out-of-Frame Inter-chr q32.1 q23.1 Transcription factor 78923 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMCC2-SIX4 TMCC2 chr1 205211665 + SIX4 chr14 61185549 + Exonic hg19 LGG TCGA-TM-A7C3-01A 859 In-Frame Inter-chr q32.1 q23.1 Transcription factor 78924 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NCOR2-GATA4 NCOR2 chr12 124862782 - GATA4 chr8 11606424 + Exonic hg19 LGG TCGA-HT-7854-01A 873 Out-of-Frame Inter-chr q24.31 p23.1 Tumor suppressor gene Transcription factor Seq+ 78925 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NCOR2-GATA4 NCOR2 chr12 124862782 - GATA4 chr8 11606427 + Exonic hg19 LGG TCGA-HT-7854-01A 873 In-Frame Inter-chr q24.31 p23.1 Tumor suppressor gene Transcription factor Seq+ 78926 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DYNLT1-MAP2K4 DYNLT1 chr6 159058888 - MAP2K4 chr17 12018920 + Exonic hg19 LGG TCGA-S9-A6U1-01A 129 Out-of-Frame Inter-chr q25.3 p12 STE:STE7 Oncogene Tumor suppressor gene 78927 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DLG2-MED17 DLG2 chr11 84634690 - MED17 chr11 93528225 - Exonic hg19 LGG TCGA-FG-5963-02A 136 In-Frame Intra-chr q14.1 q21 78928 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SEC24A-KCNK7 SEC24A chr5 133984862 + KCNK7 chr11 65361344 - Exonic hg19 LGG TCGA-VM-A8CD-01A 131 In-Frame Inter-chr q31.1 q13.1 Seq+ 78929 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 LGG TCGA-HT-7616-01A 145 Out-of-Frame Intra-chr q11.22 78930 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SCRIB-NRBP2 SCRIB chr8 144897383 - NRBP2 chr8 144922400 - Exonic hg19 LGG TCGA-HT-A5RC-01A 119 In-Frame Intra-chr Tumor suppressor gene q24.3 Other:NRBP Seq+ 78931 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTPN12-DYNC1I1 PTPN12 chr7 77166961 + DYNC1I1 chr7 95705368 + Exonic hg19 LGG TCGA-DU-5855-01A 197 In-Frame Intra-chr q11.23 Tumor suppressor gene q21.3 Seq+ 78932 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LRP6-NINJ2 LRP6 chr12 12332743 - NINJ2 chr12 675343 - Exonic hg19 LGG TCGA-E1-5304-01A 397 In-Frame Intra-chr p13.33 Seq+ 78933 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FGFR3-ELAVL3 FGFR3 chr4 1808660 + ELAVL3 chr19 11577641 - Exonic hg19 LGG TCGA-CS-6186-01A 644 In-Frame Inter-chr p16.3 TK:FGFR Oncogene p13.2 Seq+ 78934 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FYN-FNDC1 FYN chr6 111995701 - FNDC1 chr6 159619696 - Exonic hg19 LGG TCGA-E1-5304-01A 217 In-Frame Intra-chr q21 TK:Src q25.3 78935 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSFM-CYP27B1 TSFM chr12 58180944 + CYP27B1 chr12 58159979 - Exonic hg19 LGG TCGA-E1-A7YD-01A 351 In-Frame Intra-chr q14.1 q14.1 Seq+ 78936 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRPF8-MFNG PRPF8 chr17 1576374 - MFNG chr22 37878741 + Exonic hg19 LGG TCGA-E1-A7YD-01A 101 In-Frame Inter-chr q13.1 78937 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983373 - RSRC2 chr12 122990252 - Exonic hg19 LGG TCGA-HW-7487-01A 437 Out-of-Frame Intra-chr q24.31 q24.31 Seq+ 78938 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MFSD2A-LAPTM5 MFSD2A chr1 40421056 + LAPTM5 chr1 31215395 - Exonic hg19 LGG TCGA-CS-6188-01A 171 In-Frame Intra-chr p34.2 Tumor suppressor gene p35.2 Seq+ 78939 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DPP8-HACD3 DPP8 chr15 65756098 - HACD3 chr15 65843444 - Exonic hg19 LGG TCGA-HT-A617-01A 100 Out-of-Frame Intra-chr q22.31 q22.31 78940 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MYRFL-LINC01481 MYRFL chr12 70298198 + LINC01481 chr12 70636576 + Exonic hg19 LGG TCGA-CS-4941-01A 132 Out-of-Frame Intra-chr q15 Transcription factor q15 78941 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MYRFL-LINC01481 MYRFL chr12 70298198 + LINC01481 chr12 70636603 + Exonic hg19 LGG TCGA-CS-4941-01A 132 Out-of-Frame Intra-chr q15 Transcription factor q15 78942 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CPSF6-PTPRB CPSF6 chr12 69633485 + PTPRB chr12 70975081 - Exonic hg19 LGG TCGA-CS-4941-01A 3422 Out-of-Frame Intra-chr q15 q15 Seq+ 78943 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PARK7-FAM186B PARK7 chr1 8030998 - FAM186B chr12 49989231 - Exonic hg19 LGG TCGA-HT-A617-01A 154 Out-of-Frame Inter-chr p36.23 Tumor suppressor gene q13.12 78944 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DAP-SPTBN2 DAP chr5 10754859 - SPTBN2 chr11 66479091 + Exonic hg19 LGG TCGA-HT-A61B-01A 169 In-Frame Inter-chr p15.2 q13.2 78945 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ICE1-FAM120B ICE1 chr5 5442962 + FAM120B chr6 170608392 - Exonic hg19 LGG TCGA-HT-A61B-01A 365 Out-of-Frame Inter-chr p15.32 78946 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CLU-GFAP CLU chr8 27466598 + GFAP chr17 42988018 - Exonic hg19 LGG TCGA-DB-A75O-01A 108 Out-of-Frame Inter-chr p21.1 Tumor suppressor gene q21.31 Seq+ 78947 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-GFAP PCBD2 chr5 134260076 + GFAP chr17 42985462 - Exonic hg19 LGG TCGA-DB-A75O-01A 127 In-Frame Inter-chr q31.1 q21.31 78948 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCOLCE2-RPL8 PCOLCE2 chr3 142546199 - RPL8 chr8 146016682 + Exonic hg19 LGG TCGA-HT-A74O-01A 141 Out-of-Frame Inter-chr q23 q24.3 78949 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMOD3-TACC3 TMOD3 chr15 52161569 + TACC3 chr4 1746244 + Exonic hg19 LGG TCGA-TM-A84B-01A 237 Out-of-Frame Inter-chr q21.2 p16.3 Seq+ 78950 ChimerSeq Tophat-Fusion TCGA_RNA-Seq B4GALNT1-CTDSP2 B4GALNT1 chr12 58025146 + CTDSP2 chr12 58236279 - Exonic hg19 LGG TCGA-TM-A84B-01A 435 In-Frame Intra-chr q13.3 q14.1 78951 ChimerSeq Tophat-Fusion TCGA_RNA-Seq METTL21B-GLI1 METTL21B chr12 58166910 + GLI1 chr12 57857447 + Exonic hg19 LGG TCGA-TM-A84B-01A 477 CDS-5'UTR Intra-chr q13.3 Tumor suppressor gene Transcription factor Seq+ 78952 ChimerSeq Tophat-Fusion TCGA_RNA-Seq METTL21B-GLI1 METTL21B chr12 58166910 + GLI1 chr12 57858455 + Exonic hg19 LGG TCGA-TM-A84B-01A 477 In-Frame Intra-chr q13.3 Tumor suppressor gene Transcription factor Seq+ 78953 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DCTN2-CTDSP2 DCTN2 chr12 57936269 - CTDSP2 chr12 58236556 + Exonic hg19 LGG TCGA-TM-A84B-01A 154 Out-of-Frame Intra-chr q13.3 q14.1 78954 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DCTN2-CTDSP2 DCTN2 chr12 57939810 - CTDSP2 chr12 58237157 + Exonic hg19 LGG TCGA-TM-A84B-01A 152 In-Frame Intra-chr q13.3 q14.1 78955 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DCTN2-CTDSP2 DCTN2 chr12 57939810 - CTDSP2 chr12 58237447 + Exonic hg19 LGG TCGA-TM-A84B-01A 152 Out-of-Frame Intra-chr q13.3 q14.1 78956 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DCTN2-CTDSP2 DCTN2 chr12 57939810 - CTDSP2 chr12 58237451 + Exonic hg19 LGG TCGA-TM-A84B-01A 152 In-Frame Intra-chr q13.3 q14.1 78957 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FGFR3-FBXO28 FGFR3 chr4 1808660 + FBXO28 chr1 224340843 + Exonic hg19 LGG TCGA-TM-A84B-01A 1974 In-Frame Inter-chr p16.3 TK:FGFR Oncogene q42.11 Seq+ 78958 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EP300-BCOR EP300 chr22 41573819 + BCOR chrX 39930411 - Exonic hg19 LGG TCGA-DU-6404-02B 252 Out-of-Frame Inter-chr q13.2 Oncogene p11.4 Oncogene Seq+ 78959 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF529-IGSF23 ZNF529 chr19 37096027 - IGSF23 chr19 45126999 + Exonic hg19 LGG TCGA-TM-A84B-01A 286 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.31 Seq+ 78960 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PAK4-SCGB1B2P PAK4 chr19 39616558 + SCGB1B2P chr19 35068360 - Exonic hg19 LGG TCGA-TM-A84B-01A 118 5'UTR-3'UTR Intra-chr q13.2 STE:STE20 q13.11 Seq+ 78961 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OPCML-NTM OPCML chr11 132812824 - NTM chr11 132016171 + Exonic hg19 LUAD TCGA-64-1679-01A 108 Out-of-Frame Intra-chr q25 Tumor suppressor gene q25 Seq+ 78962 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DLGAP4-LOC149684 DLGAP4 chr20 35129013 + LOC149684 chr20 36917117 + Exonic hg19 LUAD TCGA-44-A47B-01A 148 Out-of-Frame Intra-chr q11.23 78963 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CDC42BPB-TNFAIP2 CDC42BPB chr14 103490548 - TNFAIP2 chr14 103594090 - Exonic hg19 LUAD TCGA-44-2668-01B 235 In-Frame Intra-chr q32.32 q32.32 78964 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131240782 + OPCML chr11 132812904 - Exonic hg19 LUAD TCGA-55-6986-11A 184 In-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 78965 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OPCML-NTM OPCML chr11 132812824 - NTM chr11 132016171 + Exonic hg19 LUAD TCGA-55-6986-11A 184 Out-of-Frame Intra-chr q25 Tumor suppressor gene q25 Seq+ 78966 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HPN-FBL HPN chr19 35544022 + FBL chr19 40328350 + Exonic hg19 LUAD TCGA-55-A48Z-01A 147 In-Frame Intra-chr q13.11 78967 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HPN-FBL HPN chr19 35540419 + FBL chr19 40328234 + Exonic hg19 LUAD TCGA-55-A48Z-01A 147 Out-of-Frame Intra-chr q13.11 78968 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUAD TCGA-55-6981-01A 261 Out-of-Frame Intra-chr q11.22 78969 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MLLT6-LASP1 MLLT6 chr17 36861993 + LASP1 chr17 37046672 + Exonic hg19 LUAD TCGA-44-A4SS-01A 108 Out-of-Frame Intra-chr q12 q12 Seq+ 78970 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF587-BAX ZNF587 chr19 58367600 + BAX chr19 49464066 + Exonic hg19 LUAD TCGA-50-6591-01A 302 Out-of-Frame Intra-chr q13.43 Transcription factor q13.33 Tumor suppressor gene Seq+ 78971 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF417-BAX ZNF417 chr19 58423427 - BAX chr19 49464066 + Exonic hg19 LUAD TCGA-50-6591-01A 369 Out-of-Frame Intra-chr q13.43 Transcription factor q13.33 Tumor suppressor gene Seq+ 78972 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTCSC3-FOXN3 PTCSC3 chr14 36634950 - FOXN3 chr14 89878277 + Exonic hg19 LUAD TCGA-44-7669-01A 163 Out-of-Frame Intra-chr q13.3 Tumor suppressor gene q32.11 Transcription factor 78973 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MYO1E-BNIP2 MYO1E chr15 59664696 - BNIP2 chr15 59963512 - Exonic hg19 LUAD TCGA-44-7660-01A 176 Out-of-Frame Intra-chr q22.2 q22.2 Seq+ 78974 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MYO1E-BNIP2 MYO1E chr15 59664696 - BNIP2 chr15 59956318 - Exonic hg19 LUAD TCGA-44-7660-01A 176 Out-of-Frame Intra-chr q22.2 q22.2 Seq+ 78975 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TADA1-CADM3 TADA1 chr1 166838681 - CADM3 chr1 159169540 + Exonic hg19 LUAD TCGA-05-4432-01A 211 In-Frame Intra-chr q24.1 q23.2 Tumor suppressor gene Seq+ 78976 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677318 + IGLL5 chr22 23235963 + Exonic hg19 LUAD TCGA-44-2657-11A 5780 Out-of-Frame Intra-chr q11.22 78977 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ITLN1-LOC101928372 ITLN1 chr1 160849100 - LOC101928372 chr1 160915081 - Exonic hg19 LUAD TCGA-49-6745-11A 524 Out-of-Frame Intra-chr q23.3 78978 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CEACAM7-RPS19 CEACAM7 chr19 42181993 - RPS19 chr19 42365280 - Exonic hg19 READ UNCID 537 In-Frame Intra-chr q13.2 78979 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CEACAM7-RPS19 CEACAM7 chr19 42189764 - RPS19 chr19 42365280 - Exonic hg19 READ UNCID 551 Out-of-Frame Intra-chr q13.2 78980 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TOX3-CASC16 TOX3 chr16 52479905 - CASC16 chr16 52586345 - Exonic hg19 READ UNCID 195 Out-of-Frame Intra-chr q12.1 q12.2 Seq+ 78981 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 CESC TCGA-EA-A3HS-01A 185 Out-of-Frame Intra-chr q11.22 78982 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PGAP3-ERBB2 PGAP3 chr17 37837498 - ERBB2 chr17 37883650 - Exonic hg19 CESC TCGA-DS-A7WF-01A 11770 In-Frame Intra-chr q12 Oncogene q12 Oncogene Seq+ 78983 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF709-MAN2B1 ZNF709 chr19 12595468 - MAN2B1 chr19 12758411 - Exonic hg19 CESC TCGA-IR-A3LI-01A 242 In-Frame Intra-chr p13.2 Transcription factor p13.13 Seq+ 78984 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CCNB2-MYO1E CCNB2 chr15 59409566 + MYO1E chr15 59558337 + Exonic hg19 CESC TCGA-DS-A0VM-01A 102 In-Frame Intra-chr q22.2 q22.2 78985 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UFC1-MAGI2 UFC1 chr1 161127080 - MAGI2 chr7 78116184 - Exonic hg19 CESC TCGA-DS-A7WF-01A 102 Out-of-Frame Inter-chr q23.3 q21.11 78986 ChimerSeq Tophat-Fusion TCGA_RNA-Seq VEGFA-RSPH9 VEGFA chr6 43746654 + RSPH9 chr6 43638525 + Exonic hg19 CESC TCGA-DS-A3LQ-01A 107 In-Frame Intra-chr p21.1 Tumor suppressor gene p21.1 Seq+ 78987 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAB11A-PPP6R3 RAB11A chr15 66161962 + PPP6R3 chr11 68377371 + Exonic hg19 CESC TCGA-ZJ-A8QR-01A 136 Out-of-Frame Inter-chr q22.31 q13.2 Seq+ 78988 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF168-FBXO45 RNF168 chr3 196210640 - FBXO45 chr3 196301140 - Exonic hg19 CESC TCGA-DS-A3LQ-01A 106 Out-of-Frame Intra-chr q29 q29 78989 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 CESC TCGA-DS-A0VK-01A 108 Out-of-Frame Intra-chr q11.22 78990 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235963 + Exonic hg19 CESC TCGA-DS-A0VK-01A 108 Out-of-Frame Intra-chr q11.22 78991 ChimerSeq Tophat-Fusion TCGA_RNA-Seq IRF6-DIEXF IRF6 chr1 209965741 - DIEXF chr1 210025157 - Exonic hg19 CESC TCGA-EK-A3GN-01A 149 CDS-3'UTR Intra-chr q32.2 Transcription factor q32.2 78992 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCOLCE2-RPL8 PCOLCE2 chr3 142546216 + RPL8 chr8 146015284 - Exonic hg19 CESC TCGA-FU-A23K-01A 111 In-Frame Inter-chr q23 q24.3 78993 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DSP-RCAN2 DSP chr6 7572300 + RCAN2 chr6 46216632 - Exonic hg19 CESC TCGA-DG-A2KL-01A 432 In-Frame Intra-chr p24.3 Tumor suppressor gene p12.3 Seq+ 78994 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PDLIM1-LINC01599 PDLIM1 chr10 97023784 + LINC01599 chr14 50517488 - Exonic hg19 CESC TCGA-Q1-A73P-01A 193 Out-of-Frame Inter-chr q23.33 78995 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTEN-RPL11 PTEN chr10 89705654 + RPL11 chr1 24021153 + Exonic hg19 CESC TCGA-EA-A3HU-01A 190 In-Frame Inter-chr q23.31 Oncogene Tumor suppressor gene p36.11 Tumor suppressor gene 78996 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NME6-SPINK8 NME6 chr3 48337608 - SPINK8 chr3 48351435 - Exonic hg19 CESC TCGA-C5-A1M6-01A 380 In-Frame Intra-chr p21.31 p21.31 Seq+ 78997 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NME6-SPINK8 NME6 chr3 48338216 - SPINK8 chr3 48351435 - Exonic hg19 CESC TCGA-C5-A1M6-01A 380 Out-of-Frame Intra-chr p21.31 p21.31 Seq+ 78998 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 CESC TCGA-MA-AA3Y-01A 421 Out-of-Frame Intra-chr q11.22 78999 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 CESC TCGA-EA-A3HQ-01A 100 Out-of-Frame Intra-chr q11.22 79000 ChimerSeq Tophat-Fusion TCGA_RNA-Seq INSL6-CD274 INSL6 chr9 5185313 - CD274 chr9 5459186 - Exonic hg19 CESC TCGA-PN-A8MA-01A 145 Out-of-Frame Intra-chr p24.1 p24.1 Oncogene 79001 ChimerSeq Tophat-Fusion TCGA_RNA-Seq INSL6-PDCD1LG2 INSL6 chr9 5185313 - PDCD1LG2 chr9 5524628 - Exonic hg19 CESC TCGA-PN-A8MA-01A 280 In-Frame Intra-chr p24.1 p24.1 79002 ChimerSeq Tophat-Fusion TCGA_RNA-Seq INSL6-PDCD1LG2 INSL6 chr9 5185313 - PDCD1LG2 chr9 5544551 - Exonic hg19 CESC TCGA-PN-A8MA-01A 172 In-Frame Intra-chr p24.1 p24.1 79003 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-KRT13 PCBD2 chr5 134262839 + KRT13 chr17 39661635 - Exonic hg19 CESC TCGA-EA-A3QE-01A 102 Out-of-Frame Inter-chr q31.1 q21.2 79004 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-KRT13 PCBD2 chr5 134262840 + KRT13 chr17 39661588 - Exonic hg19 CESC TCGA-DS-A1OB-01A 169 Out-of-Frame Inter-chr q31.1 q21.2 79005 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-KRT13 PCBD2 chr5 134262845 + KRT13 chr17 39661519 - Exonic hg19 CESC TCGA-DS-A1OB-01A 169 Out-of-Frame Inter-chr q31.1 q21.2 79006 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-KRT13 PCBD2 chr5 134262852 + KRT13 chr17 39661596 - Exonic hg19 CESC TCGA-DS-A1OB-01A 169 Out-of-Frame Inter-chr q31.1 q21.2 79007 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-KRT13 PCBD2 chr5 134263503 + KRT13 chr17 39661635 - Exonic hg19 CESC TCGA-EA-A3QE-01A 102 Out-of-Frame Inter-chr q31.1 q21.2 79008 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RUNDC1-RGS9 RUNDC1 chr17 41142452 + RGS9 chr17 63223392 + Exonic hg19 CESC TCGA-4J-AA1J-01A 238 Out-of-Frame Intra-chr q21.31 q24.1 Seq+ 79009 ChimerSeq Tophat-Fusion TCGA_RNA-Seq STARD3-MIEN1 STARD3 chr17 37809733 - MIEN1 chr17 37886515 - Exonic hg19 CESC TCGA-Q1-A73R-01A 292 5'UTR-CDS Intra-chr q12 q12 Seq+ 79010 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 CESC TCGA-FU-A3TQ-01A 181 Out-of-Frame Intra-chr q11.22 79011 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TCAP-PNMT TCAP chr17 37821620 - PNMT chr17 37825881 + Exonic hg19 CESC TCGA-Q1-A73R-01A 1220 Out-of-Frame Intra-chr q12 q12 79012 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERBB2-STARD3 ERBB2 chr17 37866733 + STARD3 chr17 37815303 + Exonic hg19 CESC TCGA-Q1-A73R-01A 235 In-Frame Intra-chr q12 Oncogene q12 Seq+ 79013 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERBB2-PPP1R1B ERBB2 chr17 37883255 + PPP1R1B chr17 37791859 + Exonic hg19 CESC TCGA-Q1-A73R-01A 27213 Out-of-Frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 79014 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERBB2-PPP1R1B ERBB2 chr17 37883799 + PPP1R1B chr17 37791859 + Exonic hg19 CESC TCGA-Q1-A73R-01A 27205 In-Frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 79015 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SRSF11-PLEKHA5 SRSF11 chr1 70716103 + PLEKHA5 chr12 19460840 + Exonic hg19 CESC TCGA-BI-A0VR-01A 125 In-Frame Inter-chr p31.1 p12.3 79016 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 CESC TCGA-EX-A8YF-01A 1169 Out-of-Frame Intra-chr q11.22 79017 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KRT16-JUP KRT16 chr17 39768409 - JUP chr17 39915121 - Exonic hg19 CESC TCGA-DS-A5RQ-01A 1020 In-Frame Intra-chr q21.2 q21.2 Tumor suppressor gene Seq+ 79018 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-KRT13 PCBD2 chr5 134260444 + KRT13 chr17 39661590 - Exonic hg19 CESC TCGA-EA-A3HR-01A 106 In-Frame Inter-chr q31.1 q21.2 79019 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-KRT13 PCBD2 chr5 134260444 + KRT13 chr17 39661614 - Exonic hg19 CESC TCGA-EA-A3HR-01A 106 In-Frame Inter-chr q31.1 q21.2 79020 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 CESC TCGA-C5-A7X8-01A 2931 Out-of-Frame Intra-chr q11.22 79021 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MED13-BAHCC1 MED13 chr17 60142500 - BAHCC1 chr17 79430636 + Exonic hg19 CESC TCGA-VS-A8EJ-01A 237 In-Frame Intra-chr q23.2 q25.3 Seq+ 79022 ChimerSeq Tophat-Fusion TCGA_RNA-Seq APOLD1-KMT5A APOLD1 chr12 12940656 + KMT5A chr12 123875332 - Exonic hg19 CESC TCGA-C5-A1BM-01A 132 Out-of-Frame Intra-chr p13.1 q24.31 79023 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TRA2A-AQP1 TRA2A chr7 23571407 - AQP1 chr7 30961680 + Exonic hg19 CESC TCGA-EK-A2PM-01A 144 In-Frame Intra-chr p15.3 p14.3 Seq+ 79024 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SH3BGR-MYL6 SH3BGR chr21 40860659 + MYL6 chr12 56553829 + Exonic hg19 CESC TCGA-DG-A2KM-01A 198 In-Frame Inter-chr q22.2 q13.2 79025 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TOP2A-RNF13 TOP2A chr17 38554809 - RNF13 chr3 149590986 + Exonic hg19 CESC TCGA-VS-A8EK-01A 236 Out-of-Frame Inter-chr q21.2 q25.1 79026 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 CESC TCGA-LP-A7HU-01A 139 Out-of-Frame Intra-chr q11.22 79027 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPS6KB1-RNFT1 RPS6KB1 chr17 57992063 + RNFT1 chr17 58030406 - Exonic hg19 CESC TCGA-C5-A907-01A 115 In-Frame Intra-chr q23.1 Oncogene q23.1 Seq+ 79028 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BCL3-APOE BCL3 chr19 45254636 + APOE chr19 45412284 + Exonic hg19 CESC TCGA-JX-A5QV-01A 662 In-Frame Intra-chr q13.32 Oncogene q13.32 Seq+ 79029 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRIK4-BCL3 GRIK4 chr11 120686167 + BCL3 chr19 45260979 - Exonic hg19 CESC TCGA-JX-A5QV-01A 342 In-Frame Inter-chr q23.3 q13.32 Oncogene 79030 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF227-HNRNPUL1 ZNF227 chr19 44722004 + HNRNPUL1 chr19 41798149 + Exonic hg19 CESC TCGA-JW-A5VI-01A 715 In-Frame Intra-chr q13.31 Transcription factor q13.2 Seq+ 79031 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WHSC1L1-SFRP1 WHSC1L1 chr8 38184247 - SFRP1 chr8 41155595 + Exonic hg19 CESC TCGA-EK-A2IR-01A 480 Out-of-Frame Intra-chr p11.23 Tumor suppressor gene p11.21 Tumor suppressor gene 79032 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WHSC1L1-SFRP1 WHSC1L1 chr8 38194840 - SFRP1 chr8 41160979 + Exonic hg19 CESC TCGA-EK-A2IR-01A 147 In-Frame Intra-chr p11.23 Tumor suppressor gene p11.21 Tumor suppressor gene 79033 ChimerSeq Tophat-Fusion TCGA_RNA-Seq STAT5A-YWHAEP7 STAT5A chr17 40442520 + YWHAEP7 chr17 36212040 - Exonic hg19 CESC TCGA-EK-A2RM-01A 287 Out-of-Frame Intra-chr q21.2 Tumor suppressor gene Transcription factor q12 Seq+ 79034 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PSMC4-LINC00663 PSMC4 chr19 40480734 + LINC00663 chr19 19882613 - Exonic hg19 CESC TCGA-JW-A5VI-01A 180 Out-of-Frame Intra-chr p13.11 79035 ChimerSeq Tophat-Fusion TCGA_RNA-Seq INADL-DYNC2H1 INADL chr1 62483615 + DYNC2H1 chr11 103151073 + Exonic hg19 CESC TCGA-Q1-A6DT-01A 121 Out-of-Frame Inter-chr q22.3 Seq+ 79036 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC16A10-NME7 SLC16A10 chr6 111498867 + NME7 chr1 169102054 - Exonic hg19 CESC TCGA-Q1-A6DT-01A 130 In-Frame Inter-chr q21 q24.2 Seq+ 79037 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MYSM1-FRMD4B MYSM1 chr1 59156011 - FRMD4B chr3 69324148 + Exonic hg19 CESC TCGA-Q1-A6DT-01A 5736 Out-of-Frame Inter-chr p32.1 Transcription factor p14.1 79038 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPFIA1-ANO1 PPFIA1 chr11 70118541 + ANO1 chr11 69962563 + Exonic hg19 CESC TCGA-IR-A3LA-01A 1025 In-Frame Intra-chr q13.3 q13.3 Seq+ 79039 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 CESC TCGA-BI-A20A-01A 664 Out-of-Frame Intra-chr q11.22 79040 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677322 + IGLL5 chr22 23235958 + Exonic hg19 CESC TCGA-VS-A94Z-01A 185 Out-of-Frame Intra-chr q11.22 79041 ChimerSeq Tophat-Fusion TCGA_RNA-Seq VRK3-TGFB1 VRK3 chr19 50504046 - TGFB1 chr19 41838185 - Exonic hg19 CESC TCGA-IR-A3LH-01A 134 Out-of-Frame Intra-chr q13.33 CK1:VRK q13.2 Tumor suppressor gene Seq+ 79042 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPP6R3-SS18 PPP6R3 chr11 68369950 + SS18 chr18 23639068 + Exonic hg19 CESC TCGA-IR-A3LA-01A 115 Out-of-Frame Inter-chr q13.2 q11.2 79043 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 CESC TCGA-EX-A69L-01A 1181 Out-of-Frame Intra-chr q11.22 79044 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CHAF1B-DOPEY2 CHAF1B chr21 37763965 + DOPEY2 chr21 37665617 + Exonic hg19 CESC TCGA-DS-A1OC-01A 115 Out-of-Frame Intra-chr q22.12 q22.12 Seq+ 79045 ChimerSeq Tophat-Fusion TCGA_RNA-Seq B4GALT1-BAG1 B4GALT1 chr9 33166755 - BAG1 chr9 33262827 - Exonic hg19 CESC TCGA-EA-A1QS-01A 247 In-Frame Intra-chr p21.1 p13.3 Seq+ 79046 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AIG1-ESR1 AIG1 chr6 143382202 + ESR1 chr6 152135330 - Exonic hg19 CESC TCGA-DS-A1OC-01A 125 Out-of-Frame Intra-chr q24.2 q25.1 Oncogene Tumor suppressor gene Transcription factor 79047 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TCF3-JAK2 TCF3 chr19 1615718 - JAK2 chr9 5112398 + Exonic hg19 CESC TCGA-C5-A1BL-01A 132 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p24.1 TK:JakA Oncogene 79048 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 BLCA TCGA-BT-A42E-01A 264 Out-of-Frame Intra-chr q11.22 79049 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235956 + Exonic hg19 BLCA TCGA-FD-A43U-01A 409 Out-of-Frame Intra-chr q11.22 79050 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 BLCA TCGA-FD-A43U-01A 409 Out-of-Frame Intra-chr q11.22 79051 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCGF3-MYL5 PCGF3 chr4 738475 + MYL5 chr4 674297 + Exonic hg19 BLCA TCGA-DK-A6B2-01A 182 Out-of-Frame Intra-chr p16.3 p16.3 Seq+ 79052 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSPAN15-HK1 TSPAN15 chr10 71258151 + HK1 chr10 71103582 + Exonic hg19 BLCA TCGA-DK-A6B2-01A 103 In-Frame Intra-chr q22.1 q22.1 Seq+ 79053 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSPAN15-HK1 TSPAN15 chr10 71264240 + HK1 chr10 71103582 + Exonic hg19 BLCA TCGA-DK-A6B2-01A 103 In-Frame Intra-chr q22.1 q22.1 Seq+ 79054 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SERINC2-PFDN2 SERINC2 chr1 31886150 + PFDN2 chr1 161072164 - Exonic hg19 BLCA TCGA-DK-A6B2-01A 135 In-Frame Intra-chr p35.2 q23.3 Seq+ 79055 ChimerSeq Tophat-Fusion TCGA_RNA-Seq VGLL4-UPF2 VGLL4 chr3 11744444 - UPF2 chr10 12009452 - Exonic hg19 BLCA TCGA-XF-A8HD-01A 149 Out-of-Frame Inter-chr p25.2 p14 Seq+ 79056 ChimerSeq Tophat-Fusion TCGA_RNA-Seq VGLL4-UPF2 VGLL4 chr3 11744444 - UPF2 chr10 12021163 - Exonic hg19 BLCA TCGA-XF-A8HD-01A 210 Out-of-Frame Inter-chr p25.2 p14 Seq+ 79057 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR62-HCST WDR62 chr19 36575645 + HCST chr19 36394252 + Exonic hg19 BLCA TCGA-BT-A3PH-01A 122 In-Frame Intra-chr q13.12 q13.12 Seq+ 79058 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BLCA TCGA-FD-A6TD-01A 155 Out-of-Frame Intra-chr q11.22 79059 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SRGAP1-KCNMB4 SRGAP1 chr12 64238662 + KCNMB4 chr12 70793988 + Exonic hg19 BLCA TCGA-BT-A42C-01A 304 Out-of-Frame Intra-chr q14.2 q15 Seq+ 79060 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UTP20-NUP37 UTP20 chr12 101777090 + NUP37 chr12 102468185 + Exonic hg19 BLCA TCGA-FD-A6TB-01A 161 In-Frame Intra-chr q23.2 q23.2 79061 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677324 + IGLL5 chr22 23235963 + Exonic hg19 BLCA TCGA-BT-A20T-01A 141 Out-of-Frame Intra-chr q11.22 79062 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677324 + IGLL5 chr22 23235957 + Exonic hg19 BLCA TCGA-FD-A6TB-01A 249 Out-of-Frame Intra-chr q11.22 79063 ChimerSeq Tophat-Fusion TCGA_RNA-Seq THRAP3-THSD7A THRAP3 chr1 36766614 + THSD7A chr7 11860462 - Exonic hg19 BLCA TCGA-DK-A6B1-01A 154 In-Frame Inter-chr p34.3 p21.3 79064 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BLCA TCGA-UY-A78K-01A 398 Out-of-Frame Intra-chr q11.22 79065 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF19A-SNX31 RNF19A chr8 101271269 - SNX31 chr8 101608866 + Exonic hg19 BLCA TCGA-E7-A4XJ-01A 118 Out-of-Frame Intra-chr q22.2 q22.3 Seq+ 79066 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SMC1B-FBLN1 SMC1B chr22 45805755 - FBLN1 chr22 45946494 - Exonic hg19 BLCA TCGA-E7-A5KE-01A 102 In-Frame Intra-chr q13.31 q13.31 Tumor suppressor gene 79067 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SNX11-FRMPD4 SNX11 chr17 46196547 + FRMPD4 chrX 12233598 - Exonic hg19 BLCA TCGA-DK-A1A6-01A 139 Out-of-Frame Inter-chr q21.32 p22.2 79068 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PLXNB1-LYRM7 PLXNB1 chr3 48450978 - LYRM7 chr5 130507425 - Exonic hg19 BLCA TCGA-E7-A5KE-01A 105 Out-of-Frame Inter-chr p21.31 q23.3 79069 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LRP5-PPP6R3 LRP5 chr11 68202265 + PPP6R3 chr11 68312903 - Exonic hg19 BLCA TCGA-DK-A1A6-01A 148 In-Frame Intra-chr q13.2 q13.2 Seq+ 79070 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CREBBP-TRAP1 CREBBP chr16 3841981 - TRAP1 chr16 3740985 - Exonic hg19 BLCA TCGA-GV-A3QI-01A 107 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 79071 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTNNA1-SIL1 CTNNA1 chr5 138223253 + SIL1 chr5 138356859 + Exonic hg19 BLCA TCGA-GV-A3QI-01A 140 Out-of-Frame Intra-chr q31.2 Oncogene q31.2 79072 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PGAP2-C11orf58 PGAP2 chr11 3827743 + C11orf58 chr11 16769703 - Exonic hg19 BLCA TCGA-GV-A3QI-01A 219 Out-of-Frame Intra-chr p15.4 p15.2 79073 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TPM1-ALK TPM1 chr15 63354843 + ALK chr2 29446393 - Exonic hg19 BLCA TCGA-GV-A3QG-01A 372 In-Frame Inter-chr q22.2 p23.1 TK:ALK Oncogene Seq+ 79074 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MYOM3-NIPAL3 MYOM3 chr1 24413239 - NIPAL3 chr1 24771733 - Exonic hg19 BLCA TCGA-GC-A3RB-01A 190 In-Frame Intra-chr p36.11 p36.11 79075 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BLCA TCGA-BT-A2LB-01A 818 Out-of-Frame Intra-chr q11.22 79076 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0430-IQCK KIAA0430 chr16 15724188 - IQCK chr16 19867808 + Exonic hg19 BLCA TCGA-BT-A2LB-01A 181 Out-of-Frame Intra-chr p12.3 Seq+ 79077 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC25A4-SORBS2 SLC25A4 chr4 186064636 + SORBS2 chr4 186553723 + Exonic hg19 BLCA TCGA-DK-A1AE-01A 108 In-Frame Intra-chr q35.1 q35.1 79078 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MAEA-ZFYVE28 MAEA chr4 1294492 + ZFYVE28 chr4 2335229 + Exonic hg19 BLCA TCGA-CF-A47V-01A 208 Out-of-Frame Intra-chr p16.3 p16.3 79079 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UBL3-CKAP2 UBL3 chr13 30423648 - CKAP2 chr13 53030657 + Exonic hg19 BLCA TCGA-BL-A3JM-01A 100 Out-of-Frame Intra-chr q12.3 q14.3 Seq+ 79080 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983373 - RSRC2 chr12 122990252 - Exonic hg19 BLCA TCGA-BL-A3JM-01A 291 Out-of-Frame Intra-chr q24.31 q24.31 Seq+ 79081 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FXYD3-TARM1 FXYD3 chr19 35610319 + TARM1 chr19 54579169 - Exonic hg19 BLCA TCGA-DK-A3X2-01A 185 In-Frame Intra-chr q13.12 Seq+ 79082 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SH3BP2-LOC101928306 SH3BP2 chr4 2814203 + LOC101928306 chr4 4935546 + Exonic hg19 BLCA TCGA-CF-A47V-01A 119 Out-of-Frame Intra-chr p16.3 79083 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SH3BGR-MYL6 SH3BGR chr21 40860658 + MYL6 chr12 56553831 + Exonic hg19 BLCA TCGA-CF-A47V-01A 174 Out-of-Frame Inter-chr q22.2 q13.2 79084 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLCO1B1-MAPRE1 SLCO1B1 chr12 21316609 + MAPRE1 chr20 31421667 - Exonic hg19 BLCA TCGA-UY-A78L-01A 494 Out-of-Frame Inter-chr p12.1 q11.21 79085 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CELSR1-CD52 CELSR1 chr22 46859603 - CD52 chr1 26646661 + Exonic hg19 LUAD TCGA-62-8394-01A 299 Out-of-Frame Inter-chr q13.31 p36.11 Seq+ 79086 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUAD TCGA-55-8203-01A 1926 Out-of-Frame Intra-chr q11.22 79087 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57992063 + VMP1 chr17 57842331 + Exonic hg19 LUAD TCGA-93-A4JQ-01A 139 In-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 79088 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HUNK-RUNX1 HUNK chr21 33291015 + RUNX1 chr21 36206706 + Exonic hg19 LUAD TCGA-O1-A52J-01A 125 Out-of-Frame Intra-chr q22.11 CAMK:CAMKL q22.12 Oncogene Tumor suppressor gene Transcription factor 79089 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HUNK-RUNX1 HUNK chr21 33279931 + RUNX1 chr21 36206706 + Exonic hg19 LUAD TCGA-O1-A52J-01A 830 Out-of-Frame Intra-chr q22.11 CAMK:CAMKL q22.12 Oncogene Tumor suppressor gene Transcription factor 79090 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LARP4-MUCL1 LARP4 chr12 50794810 + MUCL1 chr12 55250553 + Exonic hg19 LUAD TCGA-91-6840-01A 263 Out-of-Frame Intra-chr q13.12 q13.2 Seq+ 79091 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LARP4-MUCL1 LARP4 chr12 50794808 + MUCL1 chr12 55248897 + Exonic hg19 LUAD TCGA-91-6840-01A 263 Out-of-Frame Intra-chr q13.12 q13.2 Seq+ 79092 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ITGA9-SEC13 ITGA9 chr3 37792059 + SEC13 chr3 10347375 - Exonic hg19 LUAD TCGA-MP-A4TK-01A 281 In-Frame Intra-chr p22.2 Oncogene p25.3 Seq+ 79093 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SCUBE2-SRP68 SCUBE2 chr11 9078044 - SRP68 chr17 74053483 + Exonic hg19 LUAD TCGA-93-8067-01A 204 Out-of-Frame Inter-chr p15.4 Tumor suppressor gene q25.1 79094 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTMS-AP1G1 PTMS chr12 6879120 + AP1G1 chr16 71811699 - Exonic hg19 LUAD TCGA-78-7149-01A 100 Out-of-Frame Inter-chr p13.31 q22.2 79095 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TP63-P3H2 TP63 chr3 189604182 - P3H2 chr3 189682767 - Exonic hg19 LUAD TCGA-55-A493-01A 280 Out-of-Frame Intra-chr q28 Tumor suppressor gene Transcription factor q28 79096 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PVT1-LOC101927040 PVT1 chr8 128808316 + LOC101927040 chr8 80733544 - Exonic hg19 LUAD TCGA-86-7955-01A 289 Out-of-Frame Intra-chr q24.21 79097 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PVT1-LOC101927040 PVT1 chr8 128806979 + LOC101927040 chr8 80742815 - Exonic hg19 LUAD TCGA-86-7955-01A 222 Out-of-Frame Intra-chr q24.21 79098 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PVT1-LOC101927040 PVT1 chr8 128806979 + LOC101927040 chr8 80738960 - Exonic hg19 LUAD TCGA-86-7955-01A 292 Out-of-Frame Intra-chr q24.21 79099 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PVT1-LOC101927040 PVT1 chr8 128806979 + LOC101927040 chr8 80733544 - Exonic hg19 LUAD TCGA-86-7955-01A 289 Out-of-Frame Intra-chr q24.21 79100 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PVT1-LOC101927040 PVT1 chr8 128806979 + LOC101927040 chr8 80732749 - Exonic hg19 LUAD TCGA-86-7955-01A 265 Out-of-Frame Intra-chr q24.21 79101 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ST7-ATP11A ST7 chr7 116593744 + ATP11A chr13 113464565 - Exonic hg19 LUAD TCGA-55-8620-01A 349 Out-of-Frame Inter-chr q31.2 Tumor suppressor gene q34 79102 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCID2-ADPRHL1 PCID2 chr13 113850538 + ADPRHL1 chr13 114078258 - Exonic hg19 LUAD TCGA-55-8620-01A 2457 In-Frame Intra-chr q34 q34 79103 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCID2-ADPRHL1 PCID2 chr13 113849438 + ADPRHL1 chr13 114078258 - Exonic hg19 LUAD TCGA-55-8620-01A 2573 In-Frame Intra-chr q34 q34 79104 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LOC101927318-AQP5 LOC101927318 chr12 50356083 - AQP5 chr12 50357281 + Exonic hg19 LUAD TCGA-62-A46S-01A 136 Out-of-Frame Intra-chr q13.12 79105 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SSR1-FARS2 SSR1 chr6 7303782 - FARS2 chr6 5545412 + Exonic hg19 LUAD TCGA-62-A46S-01A 506 In-Frame Intra-chr p24.3 p25.1 Seq+ 79106 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FAM134C-CNTNAP1 FAM134C chr17 40733972 - CNTNAP1 chr17 40848335 - Exonic hg19 LUAD TCGA-62-A471-01A 199 In-Frame Intra-chr q21.2 79107 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FN1-ABCA12 FN1 chr2 216259250 - ABCA12 chr2 215945571 - Exonic hg19 LUAD TCGA-86-8669-01A 124 Out-of-Frame Intra-chr q35 Oncogene q35 79108 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FN1-ABCA12 FN1 chr2 216259250 - ABCA12 chr2 215940339 - Exonic hg19 LUAD TCGA-86-8669-01A 124 Out-of-Frame Intra-chr q35 Oncogene q35 79109 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LINC01473-WDR75 LINC01473 chr2 186903394 - WDR75 chr2 190334164 - Exonic hg19 LUAD TCGA-78-7536-01A 153 Out-of-Frame Intra-chr q32.1 q32.2 79110 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LINC01473-WDR75 LINC01473 chr2 186903394 - WDR75 chr2 190333294 - Exonic hg19 LUAD TCGA-78-7536-01A 153 Out-of-Frame Intra-chr q32.1 q32.2 79111 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LINC01473-WDR75 LINC01473 chr2 186902772 - WDR75 chr2 190334164 - Exonic hg19 LUAD TCGA-78-7536-01A 153 Out-of-Frame Intra-chr q32.1 q32.2 79112 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MTUS1-FGL1 MTUS1 chr8 17570722 - FGL1 chr8 17726512 - Exonic hg19 LUAD TCGA-55-8094-01A 162 In-Frame Intra-chr p22 Tumor suppressor gene p22 Seq+ 79113 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UGGT2-COL4A2 UGGT2 chr13 96665560 - COL4A2 chr13 110984942 - Exonic hg19 LUAD TCGA-69-7979-01A 200 Out-of-Frame Intra-chr q32.1 q34 79114 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PSMD1-GRID2 PSMD1 chr2 231951894 + GRID2 chr4 93471851 - Exonic hg19 LUAD TCGA-69-7979-01A 126 Out-of-Frame Inter-chr q37.1 q22.1 79115 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DOCK9-SPACA7 DOCK9 chr13 99532800 - SPACA7 chr13 113086757 + Exonic hg19 LUAD TCGA-69-7979-01A 109 Out-of-Frame Intra-chr q32.3 Seq+ 79116 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC16A14-SP110 SLC16A14 chr2 230923809 - SP110 chr2 231076267 - Exonic hg19 LUAD TCGA-78-7536-01A 893 In-Frame Intra-chr q36.3 q37.1 Transcription factor Seq+ 79117 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC16A14-SP110 SLC16A14 chr2 230914476 - SP110 chr2 231076267 - Exonic hg19 LUAD TCGA-78-7536-01A 896 In-Frame Intra-chr q36.3 q37.1 Transcription factor Seq+ 79118 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SMARCA4-DOCK6 SMARCA4 chr19 11130376 + DOCK6 chr19 11311727 - Exonic hg19 LUAD TCGA-55-8505-01A 102 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 79119 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRB10-DDC GRB10 chr7 50737418 - DDC chr7 50537868 - Exonic hg19 LUAD TCGA-55-8094-01A 147 In-Frame Intra-chr p12.1 p12.1 Seq+ 79120 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COL4A1-ATP11A COL4A1 chr13 110845375 - ATP11A chr13 113530254 - Exonic hg19 LUAD TCGA-69-7979-01A 537 In-Frame Intra-chr q34 q34 79121 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COL4A1-ATP11A COL4A1 chr13 110844688 - ATP11A chr13 113533166 - Exonic hg19 LUAD TCGA-69-7979-01A 537 Out-of-Frame Intra-chr q34 q34 79122 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUAD TCGA-55-7914-01A 4881 Out-of-Frame Intra-chr q11.22 79123 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OPCML-NTM OPCML chr11 132812820 - NTM chr11 132016175 + Exonic hg19 LUAD TCGA-91-6848-01A 113 In-Frame Intra-chr q25 Tumor suppressor gene q25 Seq+ 79124 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TANC2-CRB3 TANC2 chr17 61345233 + CRB3 chr19 6465555 + Exonic hg19 LUAD TCGA-50-5946-01A 114 In-Frame Inter-chr q23.2 p13.3 Seq+ 79125 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677323 + IGLL5 chr22 23235959 + Exonic hg19 LUAD TCGA-69-7974-01A 127 Out-of-Frame Intra-chr q11.22 79126 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BCL9L-CBL BCL9L chr11 118773698 - CBL chr11 119149502 - Exonic hg19 LUAD TCGA-55-8506-01A 272 Out-of-Frame Intra-chr q23.3 q23.3 Oncogene Tumor suppressor gene 79127 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BCL9L-CBL BCL9L chr11 118773366 - CBL chr11 119150052 - Exonic hg19 LUAD TCGA-55-8506-01A 270 In-Frame Intra-chr q23.3 q23.3 Oncogene Tumor suppressor gene 79128 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ATP1B1-RCSD1 ATP1B1 chr1 169099327 + RCSD1 chr1 167653136 + Exonic hg19 LUAD TCGA-86-8281-01A 346 In-Frame Intra-chr q24.2 q24.2 Seq+ 79129 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PHF20-ZFAS1 PHF20 chr20 34389526 + ZFAS1 chr20 47905581 + Exonic hg19 LUAD TCGA-55-8206-01A 277 Out-of-Frame Intra-chr q11.22 Transcription factor q13.13 Tumor suppressor gene Seq+ 79130 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DZANK1-DTD1 DZANK1 chr20 18429627 - DTD1 chr20 18744003 + Exonic hg19 LUAD TCGA-55-8206-01A 147 CDS-3'UTR Intra-chr p11.23 p11.23 Seq+ 79131 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SPINT2-MAP4K1 SPINT2 chr19 38781214 + MAP4K1 chr19 39087776 - Exonic hg19 LUAD TCGA-55-A492-01A 210 In-Frame Intra-chr q13.2 Tumor suppressor gene Tumor suppressor gene Seq+ 79132 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUAD TCGA-55-8206-01A 513 Out-of-Frame Intra-chr q11.22 79133 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UNC45B-DLG2 UNC45B chr17 33478347 + DLG2 chr11 85195180 - Exonic hg19 LUAD TCGA-44-3918-01A 158 Out-of-Frame Inter-chr q12 q14.1 79134 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UNC45B-DLG2 UNC45B chr17 33478273 + DLG2 chr11 85195180 - Exonic hg19 LUAD TCGA-44-3918-01A 158 In-Frame Inter-chr q12 q14.1 79135 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KDM4B-AKAP8L KDM4B chr19 5144912 + AKAP8L chr19 15491422 - Exonic hg19 LUAD TCGA-49-4486-01A 147 In-Frame Intra-chr p13.3 p13.12 Transcription factor Seq+ 79136 ChimerSeq Tophat-Fusion TCGA_RNA-Seq IL13RA1-WDR44 IL13RA1 chrX 117875118 + WDR44 chrX 117521302 + Exonic hg19 LUAD TCGA-91-8499-01A 235 In-Frame Intra-chr q24 q24 Seq+ 79137 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUAD TCGA-91-8499-01A 242 Out-of-Frame Intra-chr q11.22 79138 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CDC42BPB-TNFAIP2 CDC42BPB chr14 103490548 - TNFAIP2 chr14 103594090 - Exonic hg19 LUAD TCGA-44-2668-01A 152 In-Frame Intra-chr q32.32 q32.32 79139 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CLIP1-KNTC1 CLIP1 chr12 122837272 - KNTC1 chr12 123048400 - Exonic hg19 LUAD TCGA-49-4514-01A 102 In-Frame Intra-chr q24.31 q24.31 Seq+ 79140 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ITLN1-LOC101928372 ITLN1 chr1 160849100 - LOC101928372 chr1 160915081 - Exonic hg19 LUAD TCGA-49-4512-11A 398 Out-of-Frame Intra-chr q23.3 79141 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SEH1L-TTC39C SEH1L chr18 12984188 + TTC39C chr18 21701016 - Exonic hg19 LUAD TCGA-44-7670-01A 100 In-Frame Intra-chr p11.21 q11.2 79142 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HIF1A-PRKCH HIF1A chr14 62207905 + PRKCH chr14 61995792 + Exonic hg19 LUAD TCGA-44-2668-01A 161 In-Frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 Seq+ 79143 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MET-WNT2 MET chr7 116417522 + WNT2 chr7 116937929 - Exonic hg19 LUAD TCGA-44-7662-01A 377 Out-of-Frame Intra-chr q31.2 TK:Met Oncogene q31.2 Seq+ 79144 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CDC42BPB-TNFAIP2 CDC42BPB chr14 103490548 - TNFAIP2 chr14 103594090 - Exonic hg19 LUAD TCGA-44-2668-01A 1127 In-Frame Intra-chr q32.32 q32.32 79145 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZDHHC6-ACSL5 ZDHHC6 chr10 114201949 - ACSL5 chr10 114168179 + Exonic hg19 LUAD TCGA-44-7662-01A 267 In-Frame Intra-chr q25.2 q25.2 Seq+ 79146 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZDHHC6-ACSL5 ZDHHC6 chr10 114200291 - ACSL5 chr10 114168179 + Exonic hg19 LUAD TCGA-44-7662-01A 267 In-Frame Intra-chr q25.2 q25.2 Seq+ 79147 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUAD TCGA-55-6986-01A 250 Out-of-Frame Intra-chr q11.22 79148 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUAD TCGA-44-7662-01A 916 Out-of-Frame Intra-chr q11.22 79149 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUAD TCGA-38-4629-01A 764 Out-of-Frame Intra-chr q11.22 79150 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC9A7-CHMP5 SLC9A7 chrX 46584926 - CHMP5 chr9 33267850 + Exonic hg19 LUAD TCGA-53-7813-01A 144 Out-of-Frame Inter-chr p11.3 p13.3 79151 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UNK-B4GALNT2 UNK chr17 73781064 + B4GALNT2 chr17 47218608 + Exonic hg19 LUAD TCGA-50-6673-01A 130 In-Frame Intra-chr q25.1 q21.32 Seq+ 79152 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUAD TCGA-64-1676-01A 332 Out-of-Frame Intra-chr q11.22 79153 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235963 + Exonic hg19 LUAD TCGA-55-1594-01A 1396 Out-of-Frame Intra-chr q11.22 79154 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BLMH-CPD BLMH chr17 28601165 - CPD chr17 28712253 - Exonic hg19 LUAD TCGA-78-8660-01A 184 Out-of-Frame Intra-chr q11.2 q11.2 Tumor suppressor gene 79155 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ETV6-SLCO1B3 ETV6 chr12 11992237 + SLCO1B3 chr12 21027902 - Exonic hg19 LUAD TCGA-86-7701-01A 124 In-Frame Intra-chr p13.2 Tumor suppressor gene Transcription factor p12.2 79156 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MED1-CDK12 MED1 chr17 37607290 - CDK12 chr17 37627134 + Exonic hg19 LUAD TCGA-95-7947-01A 305 Out-of-Frame Intra-chr q12 Tumor suppressor gene q12 Oncogene Seq+ 79157 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MED1-CDK12 MED1 chr17 37607290 - CDK12 chr17 37627131 + Exonic hg19 LUAD TCGA-95-7947-01A 305 Out-of-Frame Intra-chr q12 Tumor suppressor gene q12 Oncogene Seq+ 79158 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57763168 + VMP1 chr17 57886156 + Exonic hg19 LUAD TCGA-75-6214-01A 123 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 79159 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LAMA3-ZNF521 LAMA3 chr18 21529887 + ZNF521 chr18 22807660 - Exonic hg19 LUAD TCGA-75-6214-01A 243 In-Frame Intra-chr q11.2 q11.2 Oncogene Transcription factor Seq+ 79160 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RANBP17-NSD1 RANBP17 chr5 170340043 + NSD1 chr5 176619019 - Exonic hg19 LUAD TCGA-75-6214-01A 254 In-Frame Intra-chr q35.1 q35.3 Oncogene 79161 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TLE2-AES TLE2 chr19 3028703 - AES chr19 3057739 - Exonic hg19 LUAD TCGA-91-7771-01A 100 In-Frame Intra-chr p13.3 p13.3 79162 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NFIC-DPF1 NFIC chr19 3456632 + DPF1 chr19 38706718 + Exonic hg19 LUAD TCGA-95-7567-01A 123 In-Frame Intra-chr p13.3 Transcription factor q13.2 Transcription factor 79163 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NFIC-DPF1 NFIC chr19 3452663 + DPF1 chr19 38706718 + Exonic hg19 LUAD TCGA-95-7567-01A 121 Out-of-Frame Intra-chr p13.3 Transcription factor q13.2 Transcription factor 79164 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677324 + IGLL5 chr22 23235963 + Exonic hg19 LUAD TCGA-75-6205-01A 117 Out-of-Frame Intra-chr q11.22 79165 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUAD TCGA-91-6830-01A 368 Out-of-Frame Intra-chr q11.22 79166 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUAD TCGA-86-8673-01A 731 Out-of-Frame Intra-chr q11.22 79167 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUAD TCGA-69-8453-01A 192 Out-of-Frame Intra-chr q11.22 79168 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR12-ASB7 WDR12 chr2 203747458 + ASB7 chr15 101185681 + Exonic hg19 LUAD TCGA-38-4626-01A 116 Out-of-Frame Inter-chr q33.2 q26.3 79169 ChimerSeq Tophat-Fusion TCGA_RNA-Seq INPPL1-GAB2 INPPL1 chr11 71944738 + GAB2 chr11 78111140 + Exonic hg19 LUAD TCGA-78-7148-01A 125 In-Frame Intra-chr q13.4 q14.1 79170 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 LUAD TCGA-55-8513-01A 746 Out-of-Frame Intra-chr q11.22 79171 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677318 + IGLL5 chr22 23235963 + Exonic hg19 LUAD TCGA-44-2657-01A 60368 Out-of-Frame Intra-chr q11.22 79172 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SPEN-CERS4 SPEN chr1 16174644 + CERS4 chr19 8319382 + Exonic hg19 LUAD TCGA-38-4630-01A 173 In-Frame Inter-chr p36.21 Transcription factor p13.2 Seq+ 79173 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SPEN-CERS4 SPEN chr1 16174644 + CERS4 chr19 8315959 + Exonic hg19 LUAD TCGA-38-4630-01A 173 CDS-5'UTR Inter-chr p36.21 Transcription factor p13.2 Seq+ 79174 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WBP1L-SUFU WBP1L chr10 104503899 + SUFU chr10 104352338 + Exonic hg19 LUAD TCGA-38-4630-01A 130 Out-of-Frame Intra-chr q24.32 q24.32 Oncogene Tumor suppressor gene Seq+ 79175 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMEM189-LINC01270 TMEM189 chr20 48770053 - LINC01270 chr20 48919452 - Exonic hg19 LUAD TCGA-38-4630-01A 138 Out-of-Frame Intra-chr q13.13 q13.13 79176 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BCAP31-PDZD4 BCAP31 chrX 152986326 - PDZD4 chrX 153074049 - Exonic hg19 LUAD TCGA-38-4630-01A 131 Out-of-Frame Intra-chr q28 q28 Seq+ 79177 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SCARB2-SHROOM3 SCARB2 chr4 77096943 - SHROOM3 chr4 77636398 - Exonic hg19 LUAD TCGA-38-4630-01A 123 Out-of-Frame Intra-chr q21.1 q21.1 79178 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SCARB2-SHROOM3 SCARB2 chr4 77096943 - SHROOM3 chr4 77631546 - Exonic hg19 LUAD TCGA-38-4630-01A 123 Out-of-Frame Intra-chr q21.1 q21.1 79179 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LOC101926966-DDX1 LOC101926966 chr2 15831221 + DDX1 chr2 15747298 + Exonic hg19 LUAD TCGA-38-4630-01A 164 Out-of-Frame Intra-chr p24.3 79180 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LINC00880-GTF2IRD1 LINC00880 chr3 156817271 - GTF2IRD1 chr7 73938483 - Exonic hg19 LUAD TCGA-38-4630-01A 105 Out-of-Frame Inter-chr q25.31 q11.23 Transcription factor 79181 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EIF4H-ELN EIF4H chr7 73604635 + ELN chr7 73449693 + Exonic hg19 LUAD TCGA-38-4630-01A 328 In-Frame Intra-chr q11.23 q11.23 Seq+ 79182 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EIF4H-ELN EIF4H chr7 73604247 + ELN chr7 73449693 + Exonic hg19 LUAD TCGA-38-4630-01A 328 In-Frame Intra-chr q11.23 q11.23 Seq+ 79183 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RCCD1-BLM RCCD1 chr15 91500954 + BLM chr15 91328150 + Exonic hg19 LUAD TCGA-38-4630-01A 101 In-Frame Intra-chr q26.1 q26.1 Oncogene Tumor suppressor gene Seq+ 79184 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RCCD1-BLM RCCD1 chr15 91500954 + BLM chr15 91326051 + Exonic hg19 LUAD TCGA-38-4630-01A 106 Out-of-Frame Intra-chr q26.1 q26.1 Oncogene Tumor suppressor gene Seq+ 79185 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LOC101929717-BOC LOC101929717 chr3 112862700 - BOC chr3 112969679 - Exonic hg19 LUAD TCGA-38-4630-01A 157 Out-of-Frame Intra-chr q13.2 79186 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LOC101929717-BOC LOC101929717 chr3 112862700 - BOC chr3 112935117 - Exonic hg19 LUAD TCGA-38-4630-01A 132 Out-of-Frame Intra-chr q13.2 79187 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CLIC4-GRHL3 CLIC4 chr1 25072115 + GRHL3 chr1 24671386 + Exonic hg19 LUAD TCGA-38-4630-01A 173 In-Frame Intra-chr p36.11 p36.11 Transcription factor Seq+ 79188 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR34-ZER1 WDR34 chr9 131402969 - ZER1 chr9 131505023 - Exonic hg19 LUAD TCGA-38-4630-01A 113 In-Frame Intra-chr q34.11 q34.11 Seq+ 79189 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUAD TCGA-44-5645-01A 122 Out-of-Frame Intra-chr q11.22 79190 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUAD TCGA-38-4625-11A 135 Out-of-Frame Intra-chr q11.22 79191 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 LUAD TCGA-49-4505-01A 487 Out-of-Frame Intra-chr q11.22 79192 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ABCB8-NOS3 ABCB8 chr7 150725696 + NOS3 chr7 150706017 + Exonic hg19 LUAD TCGA-MP-A4TA-01A 140 Out-of-Frame Intra-chr q36.1 q36.1 Seq+ 79193 ChimerSeq Tophat-Fusion TCGA_RNA-Seq F11R-NOS1AP F11R chr1 160990799 - NOS1AP chr1 162324976 + Exonic hg19 LUAD TCGA-78-7146-01A 116 In-Frame Intra-chr q23.3 q23.3 Seq+ 79194 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MPG-SNRNP25 MPG chr16 133254 + SNRNP25 chr16 107085 + Exonic hg19 LUAD TCGA-97-A4M7-01A 119 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 79195 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CUEDC1-CEP112 CUEDC1 chr17 55940142 - CEP112 chr17 63799117 + Exonic hg19 LUAD TCGA-78-7146-01A 140 3'UTR-CDS Intra-chr q22 q24.1 79196 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MED13-DDX42 MED13 chr17 60129897 - DDX42 chr17 61886179 + Exonic hg19 LUAD TCGA-78-7146-01A 104 Out-of-Frame Intra-chr q23.2 q23.3 Seq+ 79197 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BIN3-PEBP4 BIN3 chr8 22502267 - PEBP4 chr8 22571048 - Exonic hg19 LUAD TCGA-MN-A4N1-01A 208 Out-of-Frame Intra-chr p21.3 p21.3 Seq+ 79198 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUAD TCGA-MP-A4TA-01A 2117 Out-of-Frame Intra-chr q11.22 79199 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUAD TCGA-86-8076-01A 435 Out-of-Frame Intra-chr q11.22 79200 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUAD TCGA-86-7713-01A 325 Out-of-Frame Intra-chr q11.22 79201 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PDE4D-CRABP1 PDE4D chr5 58334685 - CRABP1 chr15 78640268 + Exonic hg19 LUAD TCGA-86-7713-01A 434 In-Frame Inter-chr q12.1 q25.1 Seq+ 79202 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UFC1-MAGI2 UFC1 chr1 161127418 - MAGI2 chr7 78116054 - Exonic hg19 LUAD TCGA-44-3917-01A 113 In-Frame Inter-chr q23.3 q21.11 79203 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LAMA3-GAREM1 LAMA3 chr18 21462008 + GAREM1 chr18 29850345 - Exonic hg19 LUAD TCGA-05-5425-01A 189 Out-of-Frame Intra-chr q11.2 q12.1 Seq+ 79204 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ITGA3-MIEN1 ITGA3 chr17 48134008 + MIEN1 chr17 37886543 - Exonic hg19 LUAD TCGA-44-3396-01A 159 In-Frame Intra-chr q21.33 q12 Seq+ 79205 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235963 + Exonic hg19 LUAD TCGA-91-6828-01A 866 Out-of-Frame Intra-chr q11.22 79206 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUAD TCGA-50-5049-01A 1056 Out-of-Frame Intra-chr q11.22 79207 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUAD TCGA-05-4403-01A 290 Out-of-Frame Intra-chr q11.22 79208 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TTC6-C14orf159 TTC6 chr14 38080843 + C14orf159 chr14 91626740 - Exonic hg19 LUAD TCGA-62-8402-01A 762 Out-of-Frame Intra-chr q21.1 q32.11 79209 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 LUAD TCGA-91-6849-11A 103 Out-of-Frame Intra-chr q11.22 79210 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 LUAD TCGA-78-8648-01A 27262 Out-of-Frame Intra-chr q11.22 79211 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KPNA1-GMPS KPNA1 chr3 122215283 - GMPS chr3 155637021 + Exonic hg19 LUAD TCGA-78-7147-01A 129 In-Frame Intra-chr q21.1 q25.31 Seq+ 79212 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 DLBC TCGA-FF-8062-01A 331 Out-of-Frame Intra-chr q11.22 79213 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 DLBC TCGA-GR-A4D5-01A 819 Out-of-Frame Intra-chr q11.22 79214 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CD84-SLAMF7 CD84 chr1 160540728 - SLAMF7 chr1 160720212 - Exonic hg19 DLBC TCGA-G8-6326-01A 806 In-Frame Intra-chr q23.3 q23.3 79215 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCOLCE2-RPL8 PCOLCE2 chr3 142546216 + RPL8 chr8 146015284 - Exonic hg19 DLBC TCGA-FF-8042-01A 104 In-Frame Inter-chr q23 q24.3 79216 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-PPEF2 HFM1 chr1 91852782 - PPEF2 chr4 76807236 - Exonic hg19 LAML TCGA-AB-2964-03A 104 Out-of-Frame Inter-chr p22.2 q21.1 79217 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-PPEF2 HFM1 chr1 91852782 - PPEF2 chr4 76807225 - Exonic hg19 LAML TCGA-AB-2984-03A 160 Out-of-Frame Inter-chr p22.2 q21.1 79218 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-PPEF2 HFM1 chr1 91852782 - PPEF2 chr4 76807236 - Exonic hg19 LAML TCGA-AB-2984-03A 160 Out-of-Frame Inter-chr p22.2 q21.1 79219 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-PPEF2 HFM1 chr1 91852782 - PPEF2 chr4 76807225 - Exonic hg19 LAML TCGA-AB-2985-03A 107 Out-of-Frame Inter-chr p22.2 q21.1 79220 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-PPEF2 HFM1 chr1 91852785 - PPEF2 chr4 76807238 - Exonic hg19 LAML TCGA-AB-2964-03A 104 In-Frame Inter-chr p22.2 q21.1 79221 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-PPEF2 HFM1 chr1 91852785 - PPEF2 chr4 76807238 - Exonic hg19 LAML TCGA-AB-2984-03A 160 In-Frame Inter-chr p22.2 q21.1 79222 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-PPEF2 HFM1 chr1 91852785 - PPEF2 chr4 76807238 - Exonic hg19 LAML TCGA-AB-2985-03A 107 In-Frame Inter-chr p22.2 q21.1 79223 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-PPEF2 HFM1 chr1 91852786 - PPEF2 chr4 76807208 - Exonic hg19 LAML TCGA-AB-2964-03A 104 Out-of-Frame Inter-chr p22.2 q21.1 79224 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-PPEF2 HFM1 chr1 91852786 - PPEF2 chr4 76807208 - Exonic hg19 LAML TCGA-AB-2984-03A 160 Out-of-Frame Inter-chr p22.2 q21.1 79225 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-PPEF2 HFM1 chr1 91852786 - PPEF2 chr4 76807208 - Exonic hg19 LAML TCGA-AB-2985-03A 107 Out-of-Frame Inter-chr p22.2 q21.1 79226 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-PPEF2 HFM1 chr1 91852800 - PPEF2 chr4 76807209 - Exonic hg19 LAML TCGA-AB-2964-03A 104 Out-of-Frame Inter-chr p22.2 q21.1 79227 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-PPEF2 HFM1 chr1 91852800 - PPEF2 chr4 76807209 - Exonic hg19 LAML TCGA-AB-2984-03A 160 Out-of-Frame Inter-chr p22.2 q21.1 79228 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-PPEF2 HFM1 chr1 91852800 - PPEF2 chr4 76807209 - Exonic hg19 LAML TCGA-AB-2985-03A 107 Out-of-Frame Inter-chr p22.2 q21.1 79229 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-PPEF2 HFM1 chr1 91852806 - PPEF2 chr4 76807216 - Exonic hg19 LAML TCGA-AB-2984-03A 160 Out-of-Frame Inter-chr p22.2 q21.1 79230 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-PPEF2 HFM1 chr1 91852806 - PPEF2 chr4 76807274 - Exonic hg19 LAML TCGA-AB-2985-03A 107 In-Frame Inter-chr p22.2 q21.1 79231 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-PPEF2 HFM1 chr1 91852823 - PPEF2 chr4 76807228 - Exonic hg19 LAML TCGA-AB-2984-03A 160 In-Frame Inter-chr p22.2 q21.1 79232 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-PPEF2 HFM1 chr1 91852827 - PPEF2 chr4 76807285 - Exonic hg19 LAML TCGA-AB-2985-03A 107 Out-of-Frame Inter-chr p22.2 q21.1 79233 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-PPEF2 HFM1 chr1 91852842 - PPEF2 chr4 76807211 - Exonic hg19 LAML TCGA-AB-2984-03A 160 In-Frame Inter-chr p22.2 q21.1 79234 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-SORCS2 HFM1 chr1 91852973 - SORCS2 chr4 7584361 - Exonic hg19 LAML TCGA-AB-2914-03A 251 Out-of-Frame Inter-chr p22.2 p16.1 79235 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-SORCS2 HFM1 chr1 91852973 - SORCS2 chr4 7584361 - Exonic hg19 LAML TCGA-AB-2963-03A 297 Out-of-Frame Inter-chr p22.2 p16.1 79236 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-SORCS2 HFM1 chr1 91852973 - SORCS2 chr4 7584361 - Exonic hg19 LAML TCGA-AB-2966-03A 123 Out-of-Frame Inter-chr p22.2 p16.1 79237 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-SORCS2 HFM1 chr1 91852995 - SORCS2 chr4 7584360 - Exonic hg19 LAML TCGA-AB-2803-03A 109 In-Frame Inter-chr p22.2 p16.1 79238 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-SORCS2 HFM1 chr1 91852995 - SORCS2 chr4 7584360 - Exonic hg19 LAML TCGA-AB-2806-03A 246 In-Frame Inter-chr p22.2 p16.1 79239 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-SORCS2 HFM1 chr1 91852995 - SORCS2 chr4 7584360 - Exonic hg19 LAML TCGA-AB-2911-03A 127 In-Frame Inter-chr p22.2 p16.1 79240 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-SORCS2 HFM1 chr1 91852995 - SORCS2 chr4 7584360 - Exonic hg19 LAML TCGA-AB-2916-03A 411 In-Frame Inter-chr p22.2 p16.1 79241 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-SORCS2 HFM1 chr1 91852995 - SORCS2 chr4 7584360 - Exonic hg19 LAML TCGA-AB-2917-03A 132 In-Frame Inter-chr p22.2 p16.1 79242 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-SORCS2 HFM1 chr1 91852995 - SORCS2 chr4 7584360 - Exonic hg19 LAML TCGA-AB-2959-03A 165 In-Frame Inter-chr p22.2 p16.1 79243 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-SORCS2 HFM1 chr1 91852995 - SORCS2 chr4 7584360 - Exonic hg19 LAML TCGA-AB-2971-03A 279 In-Frame Inter-chr p22.2 p16.1 79244 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-SORCS2 HFM1 chr1 91852995 - SORCS2 chr4 7584360 - Exonic hg19 LAML TCGA-AB-2987-03A 132 In-Frame Inter-chr p22.2 p16.1 79245 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTEN-RPL11 PTEN chr10 89705770 + RPL11 chr1 24022324 + Exonic hg19 LAML TCGA-AB-2854-03A 156 Out-of-Frame Inter-chr q23.31 Oncogene Tumor suppressor gene p36.11 Tumor suppressor gene 79246 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTEN-RPL11 PTEN chr10 89705770 + RPL11 chr1 24022324 + Exonic hg19 LAML TCGA-AB-2986-03A 156 Out-of-Frame Inter-chr q23.31 Oncogene Tumor suppressor gene p36.11 Tumor suppressor gene 79247 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTEN-RPL11 PTEN chr10 89705770 + RPL11 chr1 24022324 + Exonic hg19 LAML TCGA-AB-2999-03B 111 Out-of-Frame Inter-chr q23.31 Oncogene Tumor suppressor gene p36.11 Tumor suppressor gene 79248 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRTN3-ELANE PRTN3 chr19 846232 - ELANE chr19 855680 + Exonic hg19 LAML TCGA-AB-2803-03A 322 In-Frame Intra-chr p13.3 p13.3 79249 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2803-03A 103 Out-of-Frame Inter-chr p13.11 q32.1 79250 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2810-03A 143 Out-of-Frame Inter-chr p13.11 q32.1 79251 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2825-03A 141 Out-of-Frame Inter-chr p13.11 q32.1 79252 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2830-03A 180 Out-of-Frame Inter-chr p13.11 q32.1 79253 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2837-03A 123 Out-of-Frame Inter-chr p13.11 q32.1 79254 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2842-03A 129 Out-of-Frame Inter-chr p13.11 q32.1 79255 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2847-03A 130 Out-of-Frame Inter-chr p13.11 q32.1 79256 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2851-03A 199 Out-of-Frame Inter-chr p13.11 q32.1 79257 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2854-03A 144 Out-of-Frame Inter-chr p13.11 q32.1 79258 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2856-03A 240 Out-of-Frame Inter-chr p13.11 q32.1 79259 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2868-03A 137 Out-of-Frame Inter-chr p13.11 q32.1 79260 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2870-03A 108 Out-of-Frame Inter-chr p13.11 q32.1 79261 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2882-03A 140 Out-of-Frame Inter-chr p13.11 q32.1 79262 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2890-03A 138 Out-of-Frame Inter-chr p13.11 q32.1 79263 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2899-03A 117 Out-of-Frame Inter-chr p13.11 q32.1 79264 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2900-03A 165 Out-of-Frame Inter-chr p13.11 q32.1 79265 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2901-03A 120 Out-of-Frame Inter-chr p13.11 q32.1 79266 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2910-03A 209 Out-of-Frame Inter-chr p13.11 q32.1 79267 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2915-03A 274 Out-of-Frame Inter-chr p13.11 q32.1 79268 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2936-03A 177 Out-of-Frame Inter-chr p13.11 q32.1 79269 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2938-03A 274 Out-of-Frame Inter-chr p13.11 q32.1 79270 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2940-03A 170 Out-of-Frame Inter-chr p13.11 q32.1 79271 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2940-03A 164 Out-of-Frame Inter-chr p13.11 q32.1 79272 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2948-03A 188 Out-of-Frame Inter-chr p13.11 q32.1 79273 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2949-03B 106 Out-of-Frame Inter-chr p13.11 q32.1 79274 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2954-03A 125 Out-of-Frame Inter-chr p13.11 q32.1 79275 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2956-03A 154 Out-of-Frame Inter-chr p13.11 q32.1 79276 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2964-03A 108 Out-of-Frame Inter-chr p13.11 q32.1 79277 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2991-03A 133 Out-of-Frame Inter-chr p13.11 q32.1 79278 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2995-03A 170 Out-of-Frame Inter-chr p13.11 q32.1 79279 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FKBP8-PPP1R12B FKBP8 chr19 18650180 - PPP1R12B chr1 202408008 + Exonic hg19 LAML TCGA-AB-2996-03A 118 Out-of-Frame Inter-chr p13.11 q32.1 79280 ChimerSeq Tophat-Fusion TCGA_RNA-Seq XKR4-SBF1 XKR4 chr8 56366931 - SBF1 chr22 50904902 - Exonic hg19 LAML TCGA-AB-2904-03A 115 Out-of-Frame Inter-chr q12.1 q13.33 79281 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HSP90B1-LRRC28 HSP90B1 chr12 104331547 + LRRC28 chr15 99798685 - Exonic hg19 LAML TCGA-AB-2819-03A 102 Out-of-Frame Inter-chr q23.3 Tumor suppressor gene q26.3 79282 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0825-PCBD2 KIAA0825 chr5 93904337 - PCBD2 chr5 134260328 + Exonic hg19 LAML TCGA-AB-2904-03A 100 5'UTR-CDS Intra-chr q15 q31.1 79283 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0825-PCBD2 KIAA0825 chr5 93904337 - PCBD2 chr5 134260362 + Exonic hg19 LAML TCGA-AB-2904-03A 100 5'UTR-CDS Intra-chr q15 q31.1 79284 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0825-PCBD2 KIAA0825 chr5 93904614 - PCBD2 chr5 134260270 + Exonic hg19 LAML TCGA-AB-2853-03A 151 5'UTR-CDS Intra-chr q15 q31.1 79285 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0825-PCBD2 KIAA0825 chr5 93904632 - PCBD2 chr5 134260270 + Exonic hg19 LAML TCGA-AB-2984-03A 227 5'UTR-CDS Intra-chr q15 q31.1 79286 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0825-PCBD2 KIAA0825 chr5 93904632 - PCBD2 chr5 134260270 + Exonic hg19 LAML TCGA-AB-2986-03A 106 5'UTR-CDS Intra-chr q15 q31.1 79287 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0825-PCBD2 KIAA0825 chr5 93904633 - PCBD2 chr5 134260269 + Exonic hg19 LAML TCGA-AB-2807-03A 129 5'UTR-CDS Intra-chr q15 q31.1 79288 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0825-PCBD2 KIAA0825 chr5 93904661 - PCBD2 chr5 134260253 + Exonic hg19 LAML TCGA-AB-2965-03A 118 5'UTR-CDS Intra-chr q15 q31.1 79289 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0825-PCBD2 KIAA0825 chr5 93904672 - PCBD2 chr5 134259980 + Exonic hg19 LAML TCGA-AB-2807-03A 129 5'UTR-CDS Intra-chr q15 q31.1 79290 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0825-PCBD2 KIAA0825 chr5 93904673 - PCBD2 chr5 134260250 + Exonic hg19 LAML TCGA-AB-2904-03A 100 5'UTR-CDS Intra-chr q15 q31.1 79291 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0825-PCBD2 KIAA0825 chr5 93904673 - PCBD2 chr5 134260250 + Exonic hg19 LAML TCGA-AB-2963-03A 157 5'UTR-CDS Intra-chr q15 q31.1 79292 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0825-PCBD2 KIAA0825 chr5 93904673 - PCBD2 chr5 134260250 + Exonic hg19 LAML TCGA-AB-2965-03A 118 5'UTR-CDS Intra-chr q15 q31.1 79293 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0825-PCBD2 KIAA0825 chr5 93904676 - PCBD2 chr5 134260247 + Exonic hg19 LAML TCGA-AB-2963-03A 139 5'UTR-CDS Intra-chr q15 q31.1 79294 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0825-PCBD2 KIAA0825 chr5 93904985 - PCBD2 chr5 134260839 + Exonic hg19 LAML TCGA-AB-2978-03A 134 5'UTR-CDS Intra-chr q15 q31.1 79295 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0825-PCBD2 KIAA0825 chr5 93905765 - PCBD2 chr5 134259105 + Exonic hg19 LAML TCGA-AB-2978-03A 199 5'UTR-CDS Intra-chr q15 q31.1 79296 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0825-PCBD2 KIAA0825 chr5 93905765 - PCBD2 chr5 134259116 + Exonic hg19 LAML TCGA-AB-2978-03A 199 5'UTR-CDS Intra-chr q15 q31.1 79297 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0825-PCBD2 KIAA0825 chr5 93905767 - PCBD2 chr5 134259103 + Exonic hg19 LAML TCGA-AB-2911-03A 142 5'UTR-CDS Intra-chr q15 q31.1 79298 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0825-PCBD2 KIAA0825 chr5 93905767 - PCBD2 chr5 134259103 + Exonic hg19 LAML TCGA-AB-2986-03A 106 5'UTR-CDS Intra-chr q15 q31.1 79299 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0825-PCBD2 KIAA0825 chr5 93906039 - PCBD2 chr5 134259072 + Exonic hg19 LAML TCGA-AB-2828-03A 104 5'UTR-CDS Intra-chr q15 q31.1 79300 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0825-PCBD2 KIAA0825 chr5 93906039 - PCBD2 chr5 134259072 + Exonic hg19 LAML TCGA-AB-2964-03A 103 5'UTR-CDS Intra-chr q15 q31.1 79301 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0825-PCBD2 KIAA0825 chr5 93906039 - PCBD2 chr5 134259072 + Exonic hg19 LAML TCGA-AB-2999-03B 179 5'UTR-CDS Intra-chr q15 q31.1 79302 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0825-PCBD2 KIAA0825 chr5 93906051 - PCBD2 chr5 134259285 + Exonic hg19 LAML TCGA-AB-2942-03A 121 5'UTR-CDS Intra-chr q15 q31.1 79303 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0825-PCBD2 KIAA0825 chr5 93906056 - PCBD2 chr5 134259653 + Exonic hg19 LAML TCGA-AB-2963-03A 139 5'UTR-CDS Intra-chr q15 q31.1 79304 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0825-PCBD2 KIAA0825 chr5 93906162 - PCBD2 chr5 134259665 + Exonic hg19 LAML TCGA-AB-2986-03A 106 5'UTR-CDS Intra-chr q15 q31.1 79305 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 LAML TCGA-AB-2860-03A 381 Out-of-Frame Intra-chr q11.22 79306 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 LAML TCGA-AB-2868-03A 261 Out-of-Frame Intra-chr q11.22 79307 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 LAML TCGA-AB-2978-03A 139 Out-of-Frame Intra-chr q11.22 79308 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LAML TCGA-AB-2843-03A 113 Out-of-Frame Intra-chr q11.22 79309 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LAML TCGA-AB-2908-03A 140 Out-of-Frame Intra-chr q11.22 79310 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LAML TCGA-AB-2990-03B 118 Out-of-Frame Intra-chr q11.22 79311 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LAML TCGA-AB-2990-03B 116 Out-of-Frame Intra-chr q11.22 79312 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRID2-GNB2L1 GRID2 chr4 93743194 - GNB2L1 chr5 180664039 - Exonic hg19 LAML TCGA-AB-2819-03A 117 Out-of-Frame Inter-chr q22.1 Tumor suppressor gene 79313 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRID2-GNB2L1 GRID2 chr4 93743194 - GNB2L1 chr5 180664039 - Exonic hg19 LAML TCGA-AB-2832-03A 203 Out-of-Frame Inter-chr q22.1 Tumor suppressor gene 79314 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRID2-GNB2L1 GRID2 chr4 93743194 - GNB2L1 chr5 180664039 - Exonic hg19 LAML TCGA-AB-2844-03A 142 Out-of-Frame Inter-chr q22.1 Tumor suppressor gene 79315 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRID2-GNB2L1 GRID2 chr4 93743194 - GNB2L1 chr5 180664039 - Exonic hg19 LAML TCGA-AB-2845-03B 140 Out-of-Frame Inter-chr q22.1 Tumor suppressor gene 79316 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRID2-GNB2L1 GRID2 chr4 93743194 - GNB2L1 chr5 180664039 - Exonic hg19 LAML TCGA-AB-2847-03A 169 Out-of-Frame Inter-chr q22.1 Tumor suppressor gene 79317 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRID2-GNB2L1 GRID2 chr4 93743194 - GNB2L1 chr5 180664039 - Exonic hg19 LAML TCGA-AB-2862-03A 138 Out-of-Frame Inter-chr q22.1 Tumor suppressor gene 79318 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRID2-GNB2L1 GRID2 chr4 93743194 - GNB2L1 chr5 180664039 - Exonic hg19 LAML TCGA-AB-2881-03A 135 Out-of-Frame Inter-chr q22.1 Tumor suppressor gene 79319 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRID2-GNB2L1 GRID2 chr4 93743194 - GNB2L1 chr5 180664039 - Exonic hg19 LAML TCGA-AB-2887-03A 147 Out-of-Frame Inter-chr q22.1 Tumor suppressor gene 79320 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRID2-GNB2L1 GRID2 chr4 93743194 - GNB2L1 chr5 180664039 - Exonic hg19 LAML TCGA-AB-2919-03A 110 Out-of-Frame Inter-chr q22.1 Tumor suppressor gene 79321 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRID2-GNB2L1 GRID2 chr4 93743194 - GNB2L1 chr5 180664039 - Exonic hg19 LAML TCGA-AB-2928-03A 140 Out-of-Frame Inter-chr q22.1 Tumor suppressor gene 79322 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRID2-GNB2L1 GRID2 chr4 93743194 - GNB2L1 chr5 180664039 - Exonic hg19 LAML TCGA-AB-2949-03B 181 Out-of-Frame Inter-chr q22.1 Tumor suppressor gene 79323 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRID2-GNB2L1 GRID2 chr4 93743194 - GNB2L1 chr5 180664039 - Exonic hg19 LAML TCGA-AB-2964-03A 108 Out-of-Frame Inter-chr q22.1 Tumor suppressor gene 79324 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRID2-GNB2L1 GRID2 chr4 93743194 - GNB2L1 chr5 180664039 - Exonic hg19 LAML TCGA-AB-2969-03A 228 Out-of-Frame Inter-chr q22.1 Tumor suppressor gene 79325 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRID2-GNB2L1 GRID2 chr4 93743194 - GNB2L1 chr5 180664039 - Exonic hg19 LAML TCGA-AB-2986-03A 111 Out-of-Frame Inter-chr q22.1 Tumor suppressor gene 79326 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRID2-GNB2L1 GRID2 chr4 93743194 - GNB2L1 chr5 180664039 - Exonic hg19 LAML TCGA-AB-2999-03B 120 Out-of-Frame Inter-chr q22.1 Tumor suppressor gene 79327 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRID2-GNB2L1 GRID2 chr4 93743194 - GNB2L1 chr5 180664039 - Exonic hg19 LAML TCGA-AB-3000-03A 142 Out-of-Frame Inter-chr q22.1 Tumor suppressor gene 79328 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRID2-GNB2L1 GRID2 chr4 93743194 - GNB2L1 chr5 180664039 - Exonic hg19 LAML TCGA-AB-3007-03A 116 Out-of-Frame Inter-chr q22.1 Tumor suppressor gene 79329 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRID2-GNB2L1 GRID2 chr4 93743194 - GNB2L1 chr5 180664039 - Exonic hg19 LAML TCGA-AB-3007-03A 140 Out-of-Frame Inter-chr q22.1 Tumor suppressor gene 79330 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRID2-GNB2L1 GRID2 chr4 93743194 - GNB2L1 chr5 180664039 - Exonic hg19 LAML TCGA-AB-3012-03A 179 Out-of-Frame Inter-chr q22.1 Tumor suppressor gene 79331 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRID2-GNB2L1 GRID2 chr4 93743196 - GNB2L1 chr5 180664041 - Exonic hg19 LAML TCGA-AB-2806-03A 148 Out-of-Frame Inter-chr q22.1 Tumor suppressor gene 79332 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRID2-GNB2L1 GRID2 chr4 93743196 - GNB2L1 chr5 180664041 - Exonic hg19 LAML TCGA-AB-2924-03A 103 Out-of-Frame Inter-chr q22.1 Tumor suppressor gene 79333 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MPO-EPX MPO chr17 56355404 - EPX chr17 56274506 + Exonic hg19 LAML TCGA-AB-2830-03A 157 Out-of-Frame Intra-chr q22 q22 79334 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MPO-EPX MPO chr17 56355404 - EPX chr17 56274506 + Exonic hg19 LAML TCGA-AB-2998-03A 145 Out-of-Frame Intra-chr q22 q22 79335 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TF-ALB TF chr3 133495926 - ALB chr4 74280769 + Exonic hg19 CHOL TCGA-W5-AA2U-11A 32 Out-of-Frame Inter-chr q22.1 q13.3 79336 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TF-ALB TF chr3 133474300 - ALB chr4 74283329 + Exonic hg19 CHOL TCGA-W5-AA34-11A 32 In-Frame Inter-chr q22.1 q13.3 79337 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TF-ALB TF chr3 133478117 - ALB chr4 74283976 + Exonic hg19 CHOL TCGA-W5-AA30-11A 27 In-Frame Inter-chr q22.1 q13.3 79338 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TF-ALB TF chr3 133495892 - ALB chr4 74280797 + Exonic hg19 CHOL TCGA-W5-AA34-11A 59 Out-of-Frame Inter-chr q22.1 q13.3 79339 ChimerSeq Tophat-Fusion TCGA_RNA-Seq APOB-ALB APOB chr2 21224898 - ALB chr4 74285314 + Exonic hg19 CHOL TCGA-W5-AA30-11A 20 Out-of-Frame Inter-chr p24.1 q13.3 79340 ChimerSeq Tophat-Fusion TCGA_RNA-Seq C3-ALB C3 chr19 6684574 - ALB chr4 74285322 + Exonic hg19 CHOL TCGA-W5-AA30-11A 30 Out-of-Frame Inter-chr p13.3 q13.3 79341 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ALB-TF ALB chr4 74272402 + TF chr3 133495984 + Exonic hg19 CHOL TCGA-W5-AA2X-11A 10 In-Frame Inter-chr q13.3 q22.1 79342 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TF-ALB TF chr3 133486980 + ALB chr4 74285331 + Exonic hg19 CHOL TCGA-W5-AA30-11A 19 In-Frame Inter-chr q22.1 q13.3 79343 ChimerSeq Tophat-Fusion TCGA_RNA-Seq APOB-ALB APOB chr2 21233781 - ALB chr4 74285332 + Exonic hg19 CHOL TCGA-ZU-A8S4-11A 10 Out-of-Frame Inter-chr p24.1 q13.3 79344 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ALB-TF ALB chr4 74285355 + TF chr3 133475820 + Exonic hg19 CHOL TCGA-W5-AA31-11A 40 Out-of-Frame Inter-chr q13.3 q22.1 79345 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TF-ALB TF chr3 133495892 - ALB chr4 74280797 + Exonic hg19 CHOL TCGA-W5-AA2I-11A 32 Out-of-Frame Inter-chr q22.1 q13.3 79346 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TF-ALB TF chr3 133476733 + ALB chr4 74283999 + Exonic hg19 CHOL TCGA-W5-AA2R-11A 14 Out-of-Frame Inter-chr q22.1 q13.3 79347 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MSMP-RGP1 MSMP chr9 35753192 - RGP1 chr9 35752771 + Exonic hg19 STAD TCGA-LN-A5U7-01A1 6 In-Frame Intra-chr p13.3 p13.3 79348 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MSMP-RGP1 MSMP chr9 35753202 - RGP1 chr9 35752756 + Exonic hg19 STAD TCGA-2H-A9GJ-01A7 4 In-Frame Intra-chr p13.3 p13.3 79349 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MSMP-RGP1 MSMP chr9 35753221 - RGP1 chr9 35752064 + Exonic hg19 STAD TCGA-2H-A9GJ-01A7 4 Out-of-Frame Intra-chr p13.3 p13.3 79350 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MSMP-RGP1 MSMP chr9 35753274 - RGP1 chr9 35751996 + Exonic hg19 STAD TCGA-2H-A9GJ-01A7 4 Out-of-Frame Intra-chr p13.3 p13.3 79351 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MSMP-RGP1 MSMP chr9 35753191 - RGP1 chr9 35752711 + Exonic hg19 STAD TCGA-V5-AASW-01A6 7 In-Frame Intra-chr p13.3 p13.3 79352 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MSMP-RGP1 MSMP chr9 35753340 - RGP1 chr9 35752007 + Exonic hg19 STAD TCGA-S8-A6BW-01A7 22 In-Frame Intra-chr p13.3 p13.3 79353 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MUSK-LPAR1 MUSK chr9 113547259 + LPAR1 chr9 113703700 + Exonic hg19 STAD TCGA-LN-A7HY-01A7 2 Out-of-Frame Intra-chr q31.3 TK:Musk q31.3 79354 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTGDS-HIP1R PTGDS chr9 139872143 + HIP1R chr12 123342648 + Exonic hg19 LGG TCGA-E1-A7YK-01A 3 In-Frame Inter-chr q34.3 q24.31 Seq+ 79355 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUAD TCGA-73-7499-01A 852 Out-of-Frame Intra-chr q11.22 79356 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ELMO2-TTLL9 ELMO2 chr20 45001314 - TTLL9 chr20 30466127 + Exonic hg19 LUAD TCGA-69-8253-01A 101 In-Frame Intra-chr q13.12 q11.21 79357 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TPD52L2-PDZRN4 TPD52L2 chr20 62500793 + PDZRN4 chr12 41900257 + Exonic hg19 LUAD TCGA-55-8087-01A 120 In-Frame Inter-chr q13.33 q12 Seq+ 79358 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSG101-YWHAB TSG101 chr11 18512088 - YWHAB chr20 43533700 - Exonic hg19 CESC TCGA-EK-A3GM-01A 4 Out-of-Frame Inter-chr p15.1 Tumor suppressor gene q13.12 79359 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HSPB1-KRT19 HSPB1 chr7 75933392 - KRT19 chr17 39681232 - Exonic hg19 CESC TCGA-JX-A3Q0-01A 4 Out-of-Frame Inter-chr q11.23 q21.2 Tumor suppressor gene 79360 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CD44-PDHX CD44 chr11 35211611 + PDHX chr11 34952950 + Exonic hg19 CESC TCGA-JW-A5VJ-01A 6 In-Frame Intra-chr p13 Oncogene Tumor suppressor gene p13 Seq+ 79361 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CHRAC1-PTK2 CHRAC1 chr8 141523386 + PTK2 chr8 141753328 + Exonic hg19 CESC TCGA-FU-A3HY-01A 11 Out-of-Frame Intra-chr q24.3 q24.3 79362 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSG101-YWHAB TSG101 chr11 18512110 + YWHAB chr20 43532656 + Exonic hg19 CESC TCGA-EA-A556-01A 6 Out-of-Frame Inter-chr p15.1 Tumor suppressor gene q13.12 79363 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PIR-TMEM27 PIR chrX 15509284 - TMEM27 chrX 15682517 - Exonic hg19 BLCA TCGA-GU-A42Q-01A 30 Out-of-Frame Intra-chr p22.2 p22.2 Seq+ 79364 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SMAD3-AAGAB SMAD3 chr15 67391361 + AAGAB chr15 67529157 - Exonic hg19 BLCA TCGA-GU-A42Q-01A 68 Out-of-Frame Intra-chr q22.33 Transcription factor q23 Seq+ 79365 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SMAD3-AAGAB SMAD3 chr15 67391595 + AAGAB chr15 67529157 - Exonic hg19 BLCA TCGA-GU-A42Q-01A 68 Out-of-Frame Intra-chr q22.33 Transcription factor q23 Seq+ 79366 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SMAD3-AAGAB SMAD3 chr15 67430437 + AAGAB chr15 67529157 - Exonic hg19 BLCA TCGA-GU-A42Q-01A 18 In-Frame Intra-chr q22.33 Transcription factor q23 Seq+ 79367 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677324 + IGLL5 chr22 23235963 + Exonic hg19 LUAD TCGA-64-5778-01A 441 Out-of-Frame Intra-chr q11.22 79368 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 LUAD TCGA-55-8092-01A 1890 Out-of-Frame Intra-chr q11.22 79369 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UNC45B-DLG2 UNC45B chr17 33478274 + DLG2 chr11 85195180 - Exonic hg19 LUAD TCGA-44-2656-01A 108 Out-of-Frame Inter-chr q12 q14.1 79370 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UNC45B-DLG2 UNC45B chr17 33478273 + DLG2 chr11 85195180 - Exonic hg19 LUAD TCGA-44-2656-01A 108 In-Frame Inter-chr q12 q14.1 79371 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DDX27-TSHZ2 DDX27 chr20 47841735 + TSHZ2 chr20 51682689 - Exonic hg19 LUAD TCGA-49-4501-01A 187 In-Frame Intra-chr q13.13 q13.2 Transcription factor 79372 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 LUAD TCGA-44-2656-01A 162 Out-of-Frame Intra-chr q11.22 79373 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PIGR-MUC5AC PIGR chr1 207108047 + MUC5AC chr11 1213023 + Exonic hg19 LUAD TCGA-44-6146-01A 100 Out-of-Frame Inter-chr q32.1 79374 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OPCML-NTM OPCML chr11 132812824 - NTM chr11 132016171 + Exonic hg19 LUAD TCGA-50-8459-01A 177 Out-of-Frame Intra-chr q25 Tumor suppressor gene q25 Seq+ 79375 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUAD TCGA-78-7537-01A 1735 Out-of-Frame Intra-chr q11.22 79376 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUAD TCGA-49-4506-01A 672 Out-of-Frame Intra-chr q11.22 79377 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTMS-AP1G1 PTMS chr12 6879127 + AP1G1 chr16 71811706 - Exonic hg19 LUAD TCGA-93-A4JP-01A 149 Out-of-Frame Inter-chr p13.31 q22.2 79378 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ROS1-CD74 ROS1 chr6 117700221 - CD74 chr5 149782874 - Exonic hg19 LUAD TCGA-86-8278-01A 191 Out-of-Frame Inter-chr q22.1 Oncogene q33.1 Seq+ 79379 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ROS1-CD74 ROS1 chr6 117700221 - CD74 chr5 149782187 - Exonic hg19 LUAD TCGA-86-8278-01A 191 Out-of-Frame Inter-chr q22.1 Oncogene q33.1 Seq+ 79380 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUAD TCGA-44-6777-01A 1208 Out-of-Frame Intra-chr q11.22 79381 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677319 + IGLL5 chr22 23235958 + Exonic hg19 LUAD TCGA-50-5045-01A 5660 Out-of-Frame Intra-chr q11.22 79382 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677318 + IGLL5 chr22 23235957 + Exonic hg19 LUAD TCGA-55-7227-01A 442 Out-of-Frame Intra-chr q11.22 79383 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPFIBP1-KIAA1551 PPFIBP1 chr12 27747008 + KIAA1551 chr12 32113804 - Exonic hg19 LUAD TCGA-05-4250-01A 399 Out-of-Frame Intra-chr p11.23 p11.21 79384 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPFIBP1-KIAA1551 PPFIBP1 chr12 27745680 + KIAA1551 chr12 32113804 - Exonic hg19 LUAD TCGA-05-4250-01A 399 Out-of-Frame Intra-chr p11.23 p11.21 79385 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SREBF2-PLPP4 SREBF2 chr22 42229361 + PLPP4 chr10 122334642 + Exonic hg19 LUAD TCGA-97-8175-01A 133 Out-of-Frame Inter-chr q13.2 Transcription factor q26.12 Seq+ 79386 ChimerSeq Tophat-Fusion TCGA_RNA-Seq YKT6-EIF3B YKT6 chr7 44240837 + EIF3B chr7 2419028 + Exonic hg19 SARC TCGA-SG-A849-01A 172 Out-of-Frame Intra-chr p13 p22.3 Seq+ 79387 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FBN1-IL1RAPL2 FBN1 chr15 48902924 - IL1RAPL2 chrX 104559119 - Exonic hg19 SARC TCGA-IE-A4EJ-01A 208 Out-of-Frame Inter-chr q21.1 q22.3 79388 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FBN1-IL1RAPL2 FBN1 chr15 48902924 - IL1RAPL2 chrX 104572761 - Exonic hg19 SARC TCGA-IE-A4EJ-01A 134 Out-of-Frame Inter-chr q21.1 q22.3 79389 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FBN1-IL1RAPL2 FBN1 chr15 48902924 - IL1RAPL2 chrX 104572768 - Exonic hg19 SARC TCGA-IE-A4EJ-01A 134 In-Frame Inter-chr q21.1 q22.3 79390 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAB3IP-MYRFL RAB3IP chr12 70166960 + MYRFL chr12 70276298 - Exonic hg19 SARC TCGA-DX-A23Z-01A 280 Out-of-Frame Intra-chr q15 q15 Transcription factor Seq+ 79391 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DDX10-TBRG1 DDX10 chr11 108670542 + TBRG1 chr11 124500750 - Exonic hg19 SARC TCGA-DX-A23Z-01A 1119 Out-of-Frame Intra-chr q22.3 q24.2 Tumor suppressor gene 79392 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TAB2-PPP2R1B TAB2 chr6 149719197 + PPP2R1B chr11 111600980 + Exonic hg19 SARC TCGA-DX-A23Z-01A 798 Out-of-Frame Inter-chr q25.1 q23.1 Tumor suppressor gene 79393 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TAB2-PPP2R1B TAB2 chr6 149719301 + PPP2R1B chr11 111600002 + Exonic hg19 SARC TCGA-DX-A23Z-01A 798 Out-of-Frame Inter-chr q25.1 q23.1 Tumor suppressor gene 79394 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677324 + IGLL5 chr22 23235963 + Exonic hg19 SARC TCGA-IE-A3OV-01A 418 Out-of-Frame Intra-chr q11.22 79395 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CIZ1-DBH CIZ1 chr9 130947825 - DBH chr9 136521658 - Exonic hg19 SARC TCGA-DX-A23Z-01A 808 In-Frame Intra-chr q34.11 Tumor suppressor gene q34.2 79396 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AMDHD2-SRRM2 AMDHD2 chr16 2579333 + SRRM2 chr16 2810499 - Exonic hg19 SARC TCGA-IE-A3OV-01A 165 In-Frame Intra-chr p13.3 p13.3 79397 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LRP1-CAND1 LRP1 chr12 57596319 + CAND1 chr12 67686401 + Exonic hg19 SARC TCGA-DX-A3U6-01A 161 Out-of-Frame Intra-chr q13.3 q14.3 Seq+ 79398 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LRP1-CAND1 LRP1 chr12 57596792 + CAND1 chr12 67680694 + Exonic hg19 SARC TCGA-DX-A3U6-01A 161 In-Frame Intra-chr q13.3 q14.3 Seq+ 79399 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMBIM4-PBX3 TMBIM4 chr12 66563634 - PBX3 chr9 128691933 + Exonic hg19 SARC TCGA-DX-A23Z-01A 116 Out-of-Frame Inter-chr q14.3 q33.3 Transcription factor Seq+ 79400 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SC5D-SIAE SC5D chr11 121163524 + SIAE chr11 124545133 + Exonic hg19 SARC TCGA-DX-A23Z-01A 178 Out-of-Frame Intra-chr q23.3 q24.2 79401 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SC5D-SPA17 SC5D chr11 121163524 + SPA17 chr11 124551284 + Exonic hg19 SARC TCGA-DX-A23Z-01A 178 Out-of-Frame Intra-chr q23.3 q24.2 Seq+ 79402 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANKRD52-LOC101927653 ANKRD52 chr12 56637821 - LOC101927653 chr12 59138075 + Exonic hg19 SARC TCGA-DX-A3LY-01B 364 Out-of-Frame Intra-chr q13.3 79403 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SRI-PIP4K2C SRI chr7 87840196 - PIP4K2C chr12 57987807 + Exonic hg19 SARC TCGA-DX-A6BH-01A 492 In-Frame Inter-chr q21.12 q13.3 Seq+ 79404 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DLGAP2-WDFY2 DLGAP2 chr8 1518154 + WDFY2 chr13 52301925 - Exonic hg19 SARC TCGA-DX-A3LY-01B 189 In-Frame Inter-chr p23.3 q14.3 79405 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UBR2-LOC101928280 UBR2 chr6 42574388 + LOC101928280 chr6 68947169 + Exonic hg19 SARC TCGA-DX-A6BH-01A 1741 Out-of-Frame Intra-chr p21.1 79406 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UBR2-LOC101928280 UBR2 chr6 42574388 + LOC101928280 chr6 68950225 + Exonic hg19 SARC TCGA-DX-A6BH-01A 1741 Out-of-Frame Intra-chr p21.1 79407 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SRGAP1-OSBPL8 SRGAP1 chr12 64377856 + OSBPL8 chr12 76844630 + Exonic hg19 SARC TCGA-DX-A3LY-01B 236 Out-of-Frame Intra-chr q14.2 q21.2 79408 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DCTN2-SRGAP1 DCTN2 chr12 57939810 - SRGAP1 chr12 64377726 + Exonic hg19 SARC TCGA-DX-A3LY-01B 1303 Out-of-Frame Intra-chr q13.3 q14.2 Seq+ 79409 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DCTN2-SRGAP1 DCTN2 chr12 57940810 - SRGAP1 chr12 64377726 + Exonic hg19 SARC TCGA-DX-A3LY-01B 1303 Out-of-Frame Intra-chr q13.3 q14.2 Seq+ 79410 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CD2AP-ADGRF4 CD2AP chr6 47445983 + ADGRF4 chr6 47675439 - Exonic hg19 SARC TCGA-DX-A6BH-01A 194 Out-of-Frame Intra-chr p12.3 p12.3 79411 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CD2AP-ADGRF4 CD2AP chr6 47445983 + ADGRF4 chr6 47685175 - Exonic hg19 SARC TCGA-DX-A6BH-01A 195 Out-of-Frame Intra-chr p12.3 p12.3 79412 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CADPS2-XRCC6BP1 CADPS2 chr7 122525447 - XRCC6BP1 chr12 58339410 + Exonic hg19 SARC TCGA-DX-A6BH-01A 229 Out-of-Frame Inter-chr q31.32 Seq+ 79413 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CADPS2-XRCC6BP1 CADPS2 chr7 122526052 - XRCC6BP1 chr12 58339410 + Exonic hg19 SARC TCGA-DX-A6BH-01A 229 Out-of-Frame Inter-chr q31.32 Seq+ 79414 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CADPS2-XRCC6BP1 CADPS2 chr7 122526052 - XRCC6BP1 chr12 58345540 + Exonic hg19 SARC TCGA-DX-A6BH-01A 235 In-Frame Inter-chr q31.32 Seq+ 79415 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PLAGL1-MYRFL PLAGL1 chr6 144273432 - MYRFL chr12 70348496 + Exonic hg19 SARC TCGA-DX-A6BH-01A 135 Out-of-Frame Inter-chr q24.2 Tumor suppressor gene Transcription factor q15 Transcription factor Seq+ 79416 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FRS2-AHCYL2 FRS2 chr12 69967920 + AHCYL2 chr7 128969915 + Exonic hg19 SARC TCGA-DX-A6BH-01A 145 In-Frame Inter-chr q15 q32.1 Seq+ 79417 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UTRN-AKAP12 UTRN chr6 144917491 + AKAP12 chr6 151627037 - Exonic hg19 SARC TCGA-DX-A6BH-01A 130 In-Frame Intra-chr q24.2 q25.1 Tumor suppressor gene 79418 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LOC100288798-CRADD LOC100288798 chr12 47009716 + CRADD chr12 94106681 + Exonic hg19 SARC TCGA-DX-A1L3-01A 221 Out-of-Frame Intra-chr q22 79419 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LOC100288798-CRADD LOC100288798 chr12 47009716 + CRADD chr12 94243745 + Exonic hg19 SARC TCGA-DX-A1L3-01A 435 Out-of-Frame Intra-chr q22 79420 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TRIO-TERT TRIO chr5 14420129 + TERT chr5 1282738 - Exonic hg19 SARC TCGA-DX-A1L3-01A 158 In-Frame Intra-chr p15.2 p15.33 Oncogene Seq+ 79421 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PLEKHA5-LOC100506844 PLEKHA5 chr12 19285383 + LOC100506844 chr12 58329335 - Exonic hg19 SARC TCGA-DX-A1L3-01A 1052 CDS-3'UTR Intra-chr p12.3 79422 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PLEKHA5-XRCC6BP1 PLEKHA5 chr12 19285383 + XRCC6BP1 chr12 58335660 - Exonic hg19 SARC TCGA-DX-A1L3-01A 684 In-Frame Intra-chr p12.3 79423 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ADGB-SCPEP1 ADGB chr6 146981045 + SCPEP1 chr17 55072378 - Exonic hg19 SARC TCGA-IF-A3RQ-01A 331 In-Frame Inter-chr q24.3 q22 79424 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CNOT2-ZDHHC17 CNOT2 chr12 70672053 + ZDHHC17 chr12 77236698 + Exonic hg19 SARC TCGA-IF-A3RQ-01A 107 In-Frame Intra-chr q15 q21.2 Seq+ 79425 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CNOT2-ZDHHC17 CNOT2 chr12 70672053 + ZDHHC17 chr12 77239488 + Exonic hg19 SARC TCGA-IF-A3RQ-01A 107 In-Frame Intra-chr q15 q21.2 Seq+ 79426 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CDH18-LOC100506869 CDH18 chr5 19981168 - LOC100506869 chr12 59206195 + Exonic hg19 SARC TCGA-DX-A1L3-01A 113 Out-of-Frame Inter-chr p14.3 79427 ChimerSeq Tophat-Fusion TCGA_RNA-Seq P2RX5-TRPV1 P2RX5 chr17 3582883 - TRPV1 chr17 3475542 - Exonic hg19 SARC TCGA-K1-A6RU-01A 102 Out-of-Frame Intra-chr p13.2 p13.2 Seq+ 79428 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SND1-IMMP2L SND1 chr7 127569383 + IMMP2L chr7 110303774 - Exonic hg19 SARC TCGA-FX-A3RE-01A 213 In-Frame Intra-chr q32.1 q31.1 Seq+ 79429 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GBE1-CADM2 GBE1 chr3 81754594 - CADM2 chr3 85520453 - Exonic hg19 SARC TCGA-PC-A5DM-01A 146 Out-of-Frame Intra-chr p12.2 p12.1 Tumor suppressor gene 79430 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF700-RAD23A ZNF700 chr19 12036087 + RAD23A chr19 13063502 + Exonic hg19 SARC TCGA-HS-A5N9-01A 548 In-Frame Intra-chr p13.2 Transcription factor p13.13 Seq+ 79431 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCOLCE2-RPL8 PCOLCE2 chr3 142546199 - RPL8 chr8 146016682 + Exonic hg19 SARC TCGA-K1-A6RU-01A 111 Out-of-Frame Inter-chr q23 q24.3 79432 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TCF3-JAK2 TCF3 chr19 1615718 - JAK2 chr9 5112398 + Exonic hg19 SARC TCGA-K1-A6RU-01A 107 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p24.1 TK:JakA Oncogene 79433 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MERTK-C14orf166 MERTK chr2 112698094 + C14orf166 chr14 52471121 - Exonic hg19 SARC TCGA-HS-A5N9-01A 194 Out-of-Frame Inter-chr q13 q22.1 79434 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RCN1-LOC100506675 RCN1 chr11 32122153 + LOC100506675 chr11 32058541 - Exonic hg19 SARC TCGA-FX-A3RE-01A 243 Out-of-Frame Intra-chr p13 79435 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TCF3-JAK2 TCF3 chr19 1615718 - JAK2 chr9 5112398 + Exonic hg19 SARC TCGA-UE-A6QU-01A 100 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p24.1 TK:JakA Oncogene 79436 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DAB1-CREG1 DAB1 chr1 57571517 - CREG1 chr1 167522624 + Exonic hg19 SARC TCGA-DX-A23U-01A 230 In-Frame Intra-chr p32.1 q24.2 79437 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DAB1-CREG1 DAB1 chr1 57575955 - CREG1 chr1 167522624 + Exonic hg19 SARC TCGA-DX-A23U-01A 230 Out-of-Frame Intra-chr p32.1 q24.2 79438 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FGGY-TUBGCP5 FGGY chr1 59812060 + TUBGCP5 chr15 22836170 - Exonic hg19 SARC TCGA-DX-A23U-01A 101 In-Frame Inter-chr p32.1 q11.2 79439 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ENO1-TAS1R1 ENO1 chr1 8928046 - TAS1R1 chr1 6639101 + Exonic hg19 SARC TCGA-DX-A7EU-01A 170 In-Frame Intra-chr p36.23 p36.31 Seq+ 79440 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LINC01135-DAB1 LINC01135 chr1 59250976 + DAB1 chr1 57611101 - Exonic hg19 SARC TCGA-DX-A23U-01A 174 Out-of-Frame Intra-chr p32.1 p32.1 79441 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FLCN-EVPLL FLCN chr17 17130648 - EVPLL chr17 18289244 - Exonic hg19 SARC TCGA-DX-A6YT-01A 126 In-Frame Intra-chr p11.2 Oncogene Tumor suppressor gene 79442 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PWP1-CCDC63 PWP1 chr12 108098523 + CCDC63 chr12 111330879 + Exonic hg19 SARC TCGA-DX-A1KW-01A 439 In-Frame Intra-chr q23.3 q24.11 Seq+ 79443 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GNS-NUP107 GNS chr12 65130783 - NUP107 chr12 69103017 + Exonic hg19 SARC TCGA-DX-A1KW-01A 322 In-Frame Intra-chr q14.3 q15 Seq+ 79444 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTPN11-EPYC PTPN11 chr12 112893866 + EPYC chr12 91372038 - Exonic hg19 SARC TCGA-DX-A1KW-01A 987 In-Frame Intra-chr q24.13 Oncogene Tumor suppressor gene q21.33 Seq+ 79445 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HECTD4-LOC100506869 HECTD4 chr12 112819755 - LOC100506869 chr12 59199722 + Exonic hg19 SARC TCGA-DX-A1KW-01A 199 Out-of-Frame Intra-chr q24.13 79446 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HECTD4-LOC100506869 HECTD4 chr12 112819757 - LOC100506869 chr12 59206193 + Exonic hg19 SARC TCGA-DX-A1KW-01A 199 Out-of-Frame Intra-chr q24.13 79447 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HECTD4-TMEM120B HECTD4 chr12 112819754 - TMEM120B chr12 122208643 - Exonic hg19 SARC TCGA-DX-A1KW-01A 714 Out-of-Frame Intra-chr q24.13 q24.31 79448 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ADAM19-NAT10 ADAM19 chr5 156933782 - NAT10 chr11 34165074 - Exonic hg19 SARC TCGA-DX-A6YS-01A 131 Inter-chr q33.3 p13 79449 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ADAM19-NAT10 ADAM19 chr5 156934063 - NAT10 chr11 34160115 - Exonic hg19 SARC TCGA-DX-A6YS-01A 138 Inter-chr q33.3 p13 79450 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LOC100507377-SUGP1 LOC100507377 chr12 74565034 - SUGP1 chr19 19390085 + Exonic hg19 SARC TCGA-IS-A3KA-01A 127 3'UTR-CDS Inter-chr p13.11 79451 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LOC101927653-PPM1H LOC101927653 chr12 59066018 - PPM1H chr12 63111687 + Exonic hg19 SARC TCGA-DX-A1L0-01A 130 Out-of-Frame Intra-chr q14.2 79452 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZFC3H1-MON2 ZFC3H1 chr12 72050664 - MON2 chr12 62972224 + Exonic hg19 SARC TCGA-DX-A1L0-01A 124 Out-of-Frame Intra-chr q21.1 q14.1 Seq+ 79453 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DPYSL2-RBPMS DPYSL2 chr8 26431580 + RBPMS chr8 30336892 - Exonic hg19 SARC TCGA-DX-A1L0-01A 106 Out-of-Frame Intra-chr p21.2 p12 79454 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DPYSL2-RBPMS DPYSL2 chr8 26433050 + RBPMS chr8 30336892 - Exonic hg19 SARC TCGA-DX-A1L0-01A 106 Out-of-Frame Intra-chr p21.2 p12 79455 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NHSL1-CDIP1 NHSL1 chr6 138866759 - CDIP1 chr16 4564664 - Exonic hg19 SARC TCGA-DX-A1L0-01A 233 Out-of-Frame Inter-chr q24.1 p13.3 Seq+ 79456 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMEM19-LOC100507250 TMEM19 chr12 72095049 + LOC100507250 chr12 69079865 - Exonic hg19 SARC TCGA-DX-A1L0-01A 236 3'UTR-3'UTR Intra-chr q21.1 79457 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ITM2B-RB1 ITM2B chr13 48807612 + RB1 chr13 49051490 + Exonic hg19 SARC TCGA-DX-A6YU-01A 133 Out-of-Frame Intra-chr q14.2 q14.2 Oncogene Tumor suppressor gene Seq+ 79458 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CARMN-PCYOX1L CARMN chr5 148803806 + PCYOX1L chr5 148743598 + Exonic hg19 SARC TCGA-JV-A5VE-01A 254 Out-of-Frame Intra-chr q32 q32 79459 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CARMN-PCYOX1L CARMN chr5 148803959 + PCYOX1L chr5 148743598 + Exonic hg19 SARC TCGA-JV-A5VE-01A 254 Out-of-Frame Intra-chr q32 q32 79460 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GFRA3-TTC8 GFRA3 chr5 137588975 - TTC8 chr14 89341369 + Exonic hg19 PCPG TCGA-TT-A6YN-01A 593 In-Frame Inter-chr q31.2 q31.3 Seq+ 79461 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GFRA3-TTC8 GFRA3 chr5 137589454 - TTC8 chr14 89341369 + Exonic hg19 PCPG TCGA-TT-A6YN-01A 593 Out-of-Frame Inter-chr q31.2 q31.3 Seq+ 79462 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LINC00589-GPATCH8 LINC00589 chr8 29590522 - GPATCH8 chr17 42541839 + Exonic hg19 PCPG TCGA-S7-A7WL-01A 145 3'UTR-3'UTR Inter-chr p12 q21.31 79463 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LINC00589-GPATCH8 LINC00589 chr8 29590699 - GPATCH8 chr17 42541839 + Exonic hg19 PCPG TCGA-S7-A7WL-01A 145 3'UTR-3'UTR Inter-chr p12 q21.31 79464 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-CHGA PCBD2 chr5 134259678 + CHGA chr14 93398869 + Exonic hg19 PCPG TCGA-QT-A7U0-01A 101 Out-of-Frame Inter-chr q31.1 q32.12 79465 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-CHGA PCBD2 chr5 134264009 + CHGA chr14 93398983 + Exonic hg19 PCPG TCGA-QT-A7U0-01A 101 In-Frame Inter-chr q31.1 q32.12 79466 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-CHGB PCBD2 chr5 134262993 + CHGB chr20 5903897 + Exonic hg19 PCPG TCGA-QR-A70H-01A 101 Out-of-Frame Inter-chr q31.1 p12.3 79467 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-CHGB PCBD2 chr5 134264007 + CHGB chr20 5903876 + Exonic hg19 PCPG TCGA-QR-A70H-01A 101 Out-of-Frame Inter-chr q31.1 p12.3 79468 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-CHGA PCBD2 chr5 134259678 + CHGA chr14 93398869 + Exonic hg19 PCPG TCGA-QR-A6GX-01A 120 Out-of-Frame Inter-chr q31.1 q32.12 79469 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-CHGA PCBD2 chr5 134260380 + CHGA chr14 93398869 + Exonic hg19 PCPG TCGA-QR-A6GX-01A 120 Out-of-Frame Inter-chr q31.1 q32.12 79470 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-CHGA PCBD2 chr5 134260669 + CHGA chr14 93397842 + Exonic hg19 PCPG TCGA-QR-A6GX-01A 120 Out-of-Frame Inter-chr q31.1 q32.12 79471 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-CHGA PCBD2 chr5 134263504 + CHGA chr14 93398822 + Exonic hg19 PCPG TCGA-QR-A6GX-01A 120 Out-of-Frame Inter-chr q31.1 q32.12 79472 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-CHGA PCBD2 chr5 134263633 + CHGA chr14 93398732 + Exonic hg19 PCPG TCGA-QR-A6GX-01A 120 Out-of-Frame Inter-chr q31.1 q32.12 79473 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-CHGA PCBD2 chr5 134264009 + CHGA chr14 93398983 + Exonic hg19 PCPG TCGA-QR-A6GX-01A 120 In-Frame Inter-chr q31.1 q32.12 79474 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TRAF3-ITPK1 TRAF3 chr14 103342861 + ITPK1 chr14 93424710 - Exonic hg19 PCPG TCGA-S7-A7WM-01A 103 In-Frame Intra-chr q32.32 Seq+ 79475 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-CHGA PCBD2 chr5 134259165 + CHGA chr14 93397952 + Exonic hg19 PCPG TCGA-RW-A7CZ-01A 107 Out-of-Frame Inter-chr q31.1 q32.12 79476 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-CHGA PCBD2 chr5 134259678 + CHGA chr14 93398869 + Exonic hg19 PCPG TCGA-RW-A7CZ-01A 107 Out-of-Frame Inter-chr q31.1 q32.12 79477 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-CHGA PCBD2 chr5 134260430 + CHGA chr14 93398824 + Exonic hg19 PCPG TCGA-RW-A7CZ-01A 107 In-Frame Inter-chr q31.1 q32.12 79478 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-CHGA PCBD2 chr5 134262497 + CHGA chr14 93397955 + Exonic hg19 PCPG TCGA-RW-A7CZ-01A 107 In-Frame Inter-chr q31.1 q32.12 79479 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-CHGA PCBD2 chr5 134264009 + CHGA chr14 93398983 + Exonic hg19 PCPG TCGA-RW-A7CZ-01A 107 In-Frame Inter-chr q31.1 q32.12 79480 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-CHGA PCBD2 chr5 134259224 + CHGA chr14 93398868 + Exonic hg19 PCPG TCGA-RW-A688-01A 108 In-Frame Inter-chr q31.1 q32.12 79481 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-CHGA PCBD2 chr5 134262628 + CHGA chr14 93398714 + Exonic hg19 PCPG TCGA-RW-A688-01A 108 Out-of-Frame Inter-chr q31.1 q32.12 79482 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-CHGA PCBD2 chr5 134262816 + CHGA chr14 93398824 + Exonic hg19 PCPG TCGA-RW-A688-01A 108 Out-of-Frame Inter-chr q31.1 q32.12 79483 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-CHGA PCBD2 chr5 134263447 + CHGA chr14 93397660 + Exonic hg19 PCPG TCGA-RW-A688-01A 108 Out-of-Frame Inter-chr q31.1 q32.12 79484 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-CHGB PCBD2 chr5 134263441 + CHGB chr20 5903925 + Exonic hg19 PCPG TCGA-RW-A688-01A 113 Out-of-Frame Inter-chr q31.1 p12.3 79485 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-CHGB PCBD2 chr5 134264007 + CHGB chr20 5903876 + Exonic hg19 PCPG TCGA-RW-A688-01A 113 Out-of-Frame Inter-chr q31.1 p12.3 79486 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TCF3-JAK2 TCF3 chr19 1615718 - JAK2 chr9 5112398 + Exonic hg19 UCEC TCGA-AJ-A3BK-01A 123 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p24.1 TK:JakA Oncogene 79487 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCOLCE2-RPL8 PCOLCE2 chr3 142546216 + RPL8 chr8 146015284 - Exonic hg19 UCEC TCGA-AJ-A3BK-01A 107 In-Frame Inter-chr q23 q24.3 79488 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PDLIM1-LINC01599 PDLIM1 chr10 97023784 + LINC01599 chr14 50517488 - Exonic hg19 UCEC TCGA-EO-A3AY-01A 112 Out-of-Frame Inter-chr q23.33 79489 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPP6R3-KLC1 PPP6R3 chr11 68359211 + KLC1 chr14 104136619 - Exonic hg19 UCEC TCGA-B5-A3FD-01A 346 Out-of-Frame Inter-chr q13.2 q32.33 79490 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LDLR-MRPL4 LDLR chr19 11218189 + MRPL4 chr19 10368897 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 643 In-Frame Intra-chr p13.2 p13.2 Seq+ 79491 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERGIC3-MAP1LC3A ERGIC3 chr20 34136617 + MAP1LC3A chr20 33147011 + Exonic hg19 UCEC TCGA-E6-A8L9-01A 978 In-Frame Intra-chr q11.22 q11.22 Seq+ 79492 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GON4L-CCT3 GON4L chr1 155726748 - CCT3 chr1 156279093 - Exonic hg19 UCEC TCGA-E6-A8L9-01A 162 In-Frame Intra-chr q22 q22 Seq+ 79493 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ECE1-WNT4 ECE1 chr1 21599191 - WNT4 chr1 22448068 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 115 In-Frame Intra-chr p36.12 p36.12 Seq+ 79494 ChimerSeq Tophat-Fusion TCGA_RNA-Seq USP48-INA USP48 chr1 22109316 - INA chr10 105046791 + Exonic hg19 UCEC TCGA-AJ-A3BF-01A 154 Out-of-Frame Inter-chr p36.12 q24.33 Seq+ 79495 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SMIM10L1-DUSP16 SMIM10L1 chr12 11324020 - DUSP16 chr12 12674396 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 154 Out-of-Frame Intra-chr 79496 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC38A1-PCED1B SLC38A1 chr12 46591502 - PCED1B chr12 47494847 - Exonic hg19 UCEC TCGA-AJ-A3BF-01A 162 Out-of-Frame Intra-chr q13.11 q13.11 79497 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KDM5B-SLC25A39 KDM5B chr1 202765541 + SLC25A39 chr17 42399851 - Exonic hg19 UCEC TCGA-EO-A3B1-01A 100 In-Frame Inter-chr q32.1 Transcription factor q21.31 79498 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PEX11A-MESP1 PEX11A chr15 90233807 - MESP1 chr15 90293457 - Exonic hg19 UCEC TCGA-EO-A1Y7-01A 134 Out-of-Frame Intra-chr q26.1 q26.1 Transcription factor Seq+ 79499 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACPP-GK5 ACPP chr3 132069181 + GK5 chr3 141889237 + Exonic hg19 UCEC TCGA-AX-A3FX-01A 258 In-Frame Intra-chr q22.1 q23 79500 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CA12-USP3 CA12 chr15 63632856 - USP3 chr15 63863484 - Exonic hg19 UCEC TCGA-AX-A3FX-01A 124 In-Frame Intra-chr q22.2 q22.31 79501 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CA12-USP3 CA12 chr15 63634012 - USP3 chr15 63862777 - Exonic hg19 UCEC TCGA-AX-A3FX-01A 124 In-Frame Intra-chr q22.2 q22.31 79502 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ATP5B-VWA3B ATP5B chr12 57032135 - VWA3B chr2 98824051 + Exonic hg19 UCEC TCGA-EY-A5W2-01A 100 Out-of-Frame Inter-chr q13.3 q11.2 79503 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MCUR1-SMG6 MCUR1 chr6 13792164 - SMG6 chr17 2030852 - Exonic hg19 UCEC TCGA-BK-A139-01A 115 Out-of-Frame Inter-chr p23 p13.3 79504 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MFHAS1-LINC01420 MFHAS1 chr8 8747570 - LINC01420 chrX 56843752 + Exonic hg19 UCEC TCGA-FI-A3PV-01A 312 Out-of-Frame Inter-chr p23.1 79505 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TECR-PKN1 TECR chr19 14640522 + PKN1 chr19 14580152 + Exonic hg19 UCEC TCGA-A5-A3LP-01A 156 Out-of-Frame Intra-chr p13.12 p13.12 AGC:PKN Seq+ 79506 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RBM28-KMT2C RBM28 chr7 127970871 - KMT2C chr7 151882715 - Exonic hg19 UCEC TCGA-AX-A3FV-01A 112 Out-of-Frame Intra-chr q32.1 q36.1 Oncogene Tumor suppressor gene Seq+ 79507 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FNBP4-INSL3 FNBP4 chr11 47752925 - INSL3 chr19 17927867 - Exonic hg19 UCEC TCGA-AJ-A3NH-01A 117 In-Frame Inter-chr p11.2 p13.11 Seq+ 79508 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RFXANK-SUGP1 RFXANK chr19 19310042 + SUGP1 chr19 19391099 - Exonic hg19 UCEC TCGA-AJ-A3NH-01A 226 In-Frame Intra-chr p13.11 p13.11 Seq+ 79509 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SH3BGR-MYL6 SH3BGR chr21 40860437 + MYL6 chr12 56553479 + Exonic hg19 UCEC TCGA-BG-A2AD-11A 417 In-Frame Inter-chr q22.2 q13.2 79510 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ITLN1-LOC101928372 ITLN1 chr1 160849100 - LOC101928372 chr1 160915081 - Exonic hg19 UCEC TCGA-BG-A2AD-11A 616 Out-of-Frame Intra-chr q23.3 79511 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRF1-SGPL1 PRF1 chr10 72358643 - SGPL1 chr10 72617446 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 390 Out-of-Frame Intra-chr q22.1 q22.1 79512 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 UCEC TCGA-EY-A4KR-01A 128 Out-of-Frame Intra-chr q11.22 79513 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DOCK1-DACT3 DOCK1 chr10 128860039 + DACT3 chr19 47156331 - Exonic hg19 UCEC TCGA-EY-A4KR-01A 104 In-Frame Inter-chr q26.2 q13.32 Seq+ 79514 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NBPF20-SCAMP3 NBPF20 chr1 145205298 + SCAMP3 chr1 155225948 + Exonic hg19 UCEC TCGA-B5-A1MS-01B 168 Out-of-Frame Intra-chr q21.1 79515 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TCF3-JAK2 TCF3 chr19 1615718 - JAK2 chr9 5112398 + Exonic hg19 UCEC TCGA-SL-A6J9-01A 170 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p24.1 TK:JakA Oncogene 79516 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DNM2-QTRT1 DNM2 chr19 10829078 + QTRT1 chr19 10812625 + Exonic hg19 UCEC TCGA-D1-A3DG-01A 162 Out-of-Frame Intra-chr p13.2 p13.2 Seq+ 79517 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TCF3-JAK2 TCF3 chr19 1615718 - JAK2 chr9 5112398 + Exonic hg19 UCEC TCGA-D1-A3DG-01A 331 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p24.1 TK:JakA Oncogene 79518 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NEDD9-ADTRP NEDD9 chr6 11213513 - ADTRP chr6 11714744 - Exonic hg19 UCEC TCGA-A5-A2K2-01A 220 Out-of-Frame Intra-chr p24.2 p24.1 Seq+ 79519 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NFXL1-CORIN NFXL1 chr4 47915985 - CORIN chr4 47809063 - Exonic hg19 UCEC TCGA-BK-A139-02A 409 Out-of-Frame Intra-chr p12 Transcription factor p12 Seq+ 79520 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PACSIN2-LOC100506679 PACSIN2 chr22 43411026 - LOC100506679 chr22 43447892 - Exonic hg19 UCEC TCGA-BK-A139-02A 149 Out-of-Frame Intra-chr q13.2 79521 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKAP8-CYP4F11 AKAP8 chr19 15482612 - CYP4F11 chr19 16025975 + Exonic hg19 UCEC TCGA-B5-A5OE-01A 207 In-Frame Intra-chr p13.12 Transcription factor p13.12 79522 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SMCHD1-NDC80 SMCHD1 chr18 2656259 + NDC80 chr18 2601394 + Exonic hg19 UCEC TCGA-2E-A9G8-01A 223 In-Frame Intra-chr p11.32 Tumor suppressor gene p11.32 Seq+ 79523 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CEP70-GYG1 CEP70 chr3 138289875 - GYG1 chr3 148741839 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 727 In-Frame Intra-chr q22.3 q24 Seq+ 79524 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LOC100128885-LANCL2 LOC100128885 chr7 64035225 + LANCL2 chr7 55492946 + Exonic hg19 UCEC TCGA-AJ-A3EM-01A 269 Out-of-Frame Intra-chr p11.2 79525 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DEPDC5-BID DEPDC5 chr22 32154618 + BID chr22 18232939 - Exonic hg19 UCEC TCGA-AJ-A3EM-01A 119 In-Frame Intra-chr q12.2 q11.21 Seq+ 79526 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FAM222B-RAB5C FAM222B chr17 27161310 - RAB5C chr17 40282607 - Exonic hg19 UCEC TCGA-AJ-A3EM-01A 180 5'UTR-5'UTR Intra-chr q11.2 q21.2 Seq+ 79527 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ARID3A-MORC2 ARID3A chr19 929895 + MORC2 chr22 31328755 - Exonic hg19 UCEC TCGA-EY-A2ON-01A 328 In-Frame Inter-chr p13.3 Transcription factor q12.2 Seq+ 79528 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HNRNPL-TPRX1 HNRNPL chr19 39331739 - TPRX1 chr19 48306026 - Exonic hg19 UCEC TCGA-KP-A3VZ-01A 188 In-Frame Intra-chr q13.33 Transcription factor Seq+ 79529 ChimerSeq Tophat-Fusion TCGA_RNA-Seq VAPB-GNAS VAPB chr20 56964572 + GNAS chr20 57470666 + Exonic hg19 UCEC TCGA-KP-A3VZ-01A 421 In-Frame Intra-chr q13.32 q13.32 Oncogene Seq+ 79530 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SMARCC1-MAP4 SMARCC1 chr3 47814306 - MAP4 chr3 47899001 - Exonic hg19 UCEC TCGA-KP-A3VZ-01A 125 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 79531 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMPR1A-C10orf11 BMPR1A chr10 88659882 + C10orf11 chr10 78316966 + Exonic hg19 UCEC TCGA-EY-A3L3-01A 137 Out-of-Frame Intra-chr q23.2 TKL:STKR Oncogene Tumor suppressor gene Seq+ 79532 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMPR1A-C10orf11 BMPR1A chr10 88659882 + C10orf11 chr10 77818423 + Exonic hg19 UCEC TCGA-EY-A3L3-01A 245 In-Frame Intra-chr q23.2 TKL:STKR Oncogene Tumor suppressor gene Seq+ 79533 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMPR1A-C10orf11 BMPR1A chr10 88659882 + C10orf11 chr10 78084158 + Exonic hg19 UCEC TCGA-EY-A3L3-01A 182 Out-of-Frame Intra-chr q23.2 TKL:STKR Oncogene Tumor suppressor gene Seq+ 79534 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NEDD9-GOLGB1 NEDD9 chr6 11213513 - GOLGB1 chr3 121388201 - Exonic hg19 UCEC TCGA-EY-A3QX-01A 185 In-Frame Inter-chr p24.2 q13.33 Seq+ 79535 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983373 - RSRC2 chr12 122990252 - Exonic hg19 UCEC TCGA-EY-A3QX-01A 285 Out-of-Frame Intra-chr q24.31 q24.31 Seq+ 79536 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LRPPRC-CAMKMT LRPPRC chr2 44139570 - CAMKMT chr2 44626927 - Exonic hg19 UCEC TCGA-EY-A3QX-01A 183 Out-of-Frame Intra-chr p21 p21 79537 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LRPPRC-CAMKMT LRPPRC chr2 44139570 - CAMKMT chr2 44629112 - Exonic hg19 UCEC TCGA-EY-A3QX-01A 183 Out-of-Frame Intra-chr p21 p21 79538 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NPC1-LOC101927571 NPC1 chr18 21118505 - LOC101927571 chr18 20303711 - Exonic hg19 UCEC TCGA-AX-A3G4-01A 237 Out-of-Frame Intra-chr q11.2 79539 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LDHB-CTNNA2 LDHB chr12 21790004 - CTNNA2 chr2 80620335 + Exonic hg19 UCEC TCGA-AJ-A3QS-01A 108 In-Frame Inter-chr p12.1 p12 Tumor suppressor gene Seq+ 79540 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ALG9-DIXDC1 ALG9 chr11 111706887 - DIXDC1 chr11 111815205 - Exonic hg19 UCEC TCGA-PG-A5BC-01A 115 In-Frame Intra-chr q23.1 q23.1 79541 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677324 + IGLL5 chr22 23235963 + Exonic hg19 UCEC TCGA-AJ-A8CT-01A 495 Out-of-Frame Intra-chr q11.22 79542 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRRC2B-NUP214 PRRC2B chr9 134358831 + NUP214 chr9 134103546 + Exonic hg19 UCEC TCGA-AX-A2H4-01A 131 Out-of-Frame Intra-chr q34.13 q34.13 Oncogene Seq+ 79543 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RFT1-TKT RFT1 chr3 53159924 - TKT chr3 53276257 - Exonic hg19 UCEC TCGA-B5-A5OD-01A 101 In-Frame Intra-chr p21.1 p21.1 Tumor suppressor gene Seq+ 79544 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SNHG19-RAB26 SNHG19 chr16 2204860 - RAB26 chr16 2201569 + Exonic hg19 UCEC TCGA-B5-A5OD-01A 125 Out-of-Frame Intra-chr p13.3 p13.3 79545 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SNHG19-RAB26 SNHG19 chr16 2204861 - RAB26 chr16 2199940 + Exonic hg19 UCEC TCGA-B5-A5OD-01A 125 Out-of-Frame Intra-chr p13.3 p13.3 79546 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ASRGL1-RCC2 ASRGL1 chr11 62140474 + RCC2 chr1 17736566 - Exonic hg19 UCEC TCGA-FI-A3PX-01A 847 In-Frame Inter-chr q12.3 Seq+ 79547 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCOLCE2-RPL8 PCOLCE2 chr3 142546221 + RPL8 chr8 146015282 - Exonic hg19 UCEC TCGA-EY-A547-01A 281 Out-of-Frame Inter-chr q23 q24.3 79548 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HIPK2-PARP12 HIPK2 chr7 139415730 - PARP12 chr7 139726147 - Exonic hg19 UCEC TCGA-KP-A3W4-01A 248 In-Frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Seq+ 79549 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HIPK2-PARP12 HIPK2 chr7 139415730 - PARP12 chr7 139728487 - Exonic hg19 UCEC TCGA-KP-A3W4-01A 248 In-Frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Seq+ 79550 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677324 + IGLL5 chr22 23235963 + Exonic hg19 UCEC TCGA-EY-A1GP-01A 1220 Out-of-Frame Intra-chr q11.22 79551 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CPQ-AZIN1 CPQ chr8 97965837 + AZIN1 chr8 103851877 + Exonic hg19 UCEC TCGA-BK-A4ZD-01A 280 In-Frame Intra-chr q22.1 q22.3 79552 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ARHGAP44-RPL38 ARHGAP44 chr17 12707446 + RPL38 chr17 72200328 - Exonic hg19 UCEC TCGA-BK-A4ZD-01A 485 In-Frame Intra-chr p12 q25.1 79553 ChimerSeq Tophat-Fusion TCGA_RNA-Seq URI1-SYMPK URI1 chr19 30474220 + SYMPK chr19 46366315 + Exonic hg19 UCEC TCGA-PG-A915-01A 466 5'UTR-5'UTR Intra-chr q12 q13.32 79554 ChimerSeq Tophat-Fusion TCGA_RNA-Seq URI1-FOXA3 URI1 chr19 30477323 + FOXA3 chr19 46375332 + Exonic hg19 UCEC TCGA-PG-A915-01A 458 Out-of-Frame Intra-chr q12 q13.32 Transcription factor Seq+ 79555 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CDON-NF2 CDON chr11 125848198 - NF2 chr22 30090740 + Exonic hg19 UCEC TCGA-PG-A915-01A 153 Out-of-Frame Inter-chr q24.2 q12.2 Oncogene Tumor suppressor gene Seq+ 79556 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GHRL-SEC13 GHRL chr3 10328387 - SEC13 chr3 10343057 - Exonic hg19 UCEC TCGA-PG-A915-01A 122 Out-of-Frame Intra-chr p25.3 p25.3 Seq+ 79557 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MYL6-SH3BGR MYL6 chr12 56553844 + SH3BGR chr21 40860269 + Exonic hg19 UCEC TCGA-FL-A1YH-11A 142 Out-of-Frame Inter-chr q13.2 q22.2 79558 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NUFIP1-SREBF1 NUFIP1 chr13 45533510 - SREBF1 chr17 17718534 + Exonic hg19 UCEC TCGA-B5-A3S1-01A 164 Out-of-Frame Inter-chr q14.12 p11.2 Transcription factor 79559 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FBXO16-EXTL3 FBXO16 chr8 28306470 - EXTL3 chr8 28575723 - Exonic hg19 UCEC TCGA-EO-A3KW-01A 133 Out-of-Frame Intra-chr p21.1 p21.1 Tumor suppressor gene 79560 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FBXO16-EXTL3 FBXO16 chr8 28313140 - EXTL3 chr8 28575723 - Exonic hg19 UCEC TCGA-EO-A3KW-01A 133 In-Frame Intra-chr p21.1 p21.1 Tumor suppressor gene 79561 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GTF3C2-BRE GTF3C2 chr2 27560110 - BRE chr2 28388008 - Exonic hg19 UCEC TCGA-H5-A2HR-01A 152 In-Frame Intra-chr p23.3 79562 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PON2-SLC13A1 PON2 chr7 95045553 - SLC13A1 chr7 122813045 + Exonic hg19 UCEC TCGA-D1-A3DH-01A 100 In-Frame Intra-chr q21.3 q31.32 79563 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HACD3-URM1 HACD3 chr15 65851068 + URM1 chr9 131150094 + Exonic hg19 UCEC TCGA-EY-A210-01A 226 Out-of-Frame Inter-chr q22.31 q34.11 Seq+ 79564 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 UCEC TCGA-EY-A210-01A 390 Out-of-Frame Intra-chr q11.22 79565 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 UCEC TCGA-E6-A2P8-01A 409 Out-of-Frame Intra-chr q11.22 79566 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCOLCE2-RPL8 PCOLCE2 chr3 142546216 + RPL8 chr8 146015284 - Exonic hg19 UCEC TCGA-AJ-A3BI-01A 138 In-Frame Inter-chr q23 q24.3 79567 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ARHGEF2-PAQR6 ARHGEF2 chr1 155934796 - PAQR6 chr1 156214586 - Exonic hg19 UCEC TCGA-5B-A90C-01A 171 Out-of-Frame Intra-chr q22 q22 Seq+ 79568 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ARHGEF2-PAQR6 ARHGEF2 chr1 155935093 - PAQR6 chr1 156214193 - Exonic hg19 UCEC TCGA-5B-A90C-01A 171 In-Frame Intra-chr q22 q22 Seq+ 79569 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDHD1-DLGAP5 WDHD1 chr14 55493428 - DLGAP5 chr14 55621523 - Exonic hg19 UCEC TCGA-5B-A90C-01A 186 Out-of-Frame Intra-chr q22.3 q22.3 Seq+ 79570 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FGFR2-SHTN1 FGFR2 chr10 123243211 - SHTN1 chr10 118708507 - Exonic hg19 UCEC TCGA-5B-A90C-01A 909 Out-of-Frame Intra-chr q26.13 TK:FGFR Oncogene q25.3 Pub Seq+ 79571 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PEF1-LAMA3 PEF1 chr1 32100822 - LAMA3 chr18 21290652 - Exonic hg19 UCEC TCGA-5B-A90C-01A 119 Out-of-Frame Inter-chr p35.2 q11.2 79572 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PEF1-LAMA3 PEF1 chr1 32100822 - LAMA3 chr18 21307154 - Exonic hg19 UCEC TCGA-5B-A90C-01A 166 In-Frame Inter-chr p35.2 q11.2 79573 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PEF1-LAMA3 PEF1 chr1 32100822 - LAMA3 chr18 21309541 - Exonic hg19 UCEC TCGA-5B-A90C-01A 165 Out-of-Frame Inter-chr p35.2 q11.2 79574 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PEF1-LAMA3 PEF1 chr1 32100822 - LAMA3 chr18 21309971 - Exonic hg19 UCEC TCGA-5B-A90C-01A 165 In-Frame Inter-chr p35.2 q11.2 79575 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MED1-GSDMB MED1 chr17 37575969 - GSDMB chr17 38062523 - Exonic hg19 UCEC TCGA-5B-A90C-01A 133 In-Frame Intra-chr q12 Tumor suppressor gene q21.1 Seq+ 79576 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MED1-GSDMB MED1 chr17 37575969 - GSDMB chr17 38063239 - Exonic hg19 UCEC TCGA-5B-A90C-01A 133 In-Frame Intra-chr q12 Tumor suppressor gene q21.1 Seq+ 79577 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UVRAG-BLMH UVRAG chr11 75594395 + BLMH chr17 28593902 + Exonic hg19 UCEC TCGA-5B-A90C-01A 129 Out-of-Frame Inter-chr q13.5 Tumor suppressor gene q11.2 79578 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UVRAG-BLMH UVRAG chr11 75599946 + BLMH chr17 28601165 + Exonic hg19 UCEC TCGA-5B-A90C-01A 129 In-Frame Inter-chr q13.5 Tumor suppressor gene q11.2 79579 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RQCD1-ARPC2 RQCD1 chr2 219433700 + ARPC2 chr2 219103386 + Exonic hg19 UCEC TCGA-5B-A90C-01A 223 Out-of-Frame Intra-chr q35 Seq+ 79580 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HIPK2-PARP12 HIPK2 chr7 139415730 - PARP12 chr7 139726147 - Exonic hg19 UCEC TCGA-A5-A2K4-01A 180 In-Frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Seq+ 79581 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HIPK2-PARP12 HIPK2 chr7 139415730 - PARP12 chr7 139728487 - Exonic hg19 UCEC TCGA-A5-A2K4-01A 180 In-Frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Seq+ 79582 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ATP5B-VWA3B ATP5B chr12 57038639 - VWA3B chr2 98822908 + Exonic hg19 UCEC TCGA-BG-A0MK-01A 115 In-Frame Inter-chr q13.3 q11.2 79583 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FAM71E1-EMC10 FAM71E1 chr19 50979776 - EMC10 chr19 50981185 + Exonic hg19 OV TCGA-23-1023-01R 119 Out-of-Frame Intra-chr q13.33 q13.33 79584 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OBSL1-STK11IP OBSL1 chr2 220429328 - STK11IP chr2 220468678 - Exonic hg19 OV TCGA-23-1023-01R 108 In-Frame Intra-chr q35 q35 79585 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OBSL1-STK11IP OBSL1 chr2 220429963 - STK11IP chr2 220466430 - Exonic hg19 OV TCGA-23-1023-01R 111 Out-of-Frame Intra-chr q35 q35 79586 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OBSL1-STK11IP OBSL1 chr2 220429963 - STK11IP chr2 220466488 - Exonic hg19 OV TCGA-23-1023-01R 111 Out-of-Frame Intra-chr q35 q35 79587 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OBSL1-STK11IP OBSL1 chr2 220429963 - STK11IP chr2 220468194 - Exonic hg19 OV TCGA-23-1023-01R 111 In-Frame Intra-chr q35 q35 79588 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OBSL1-STK11IP OBSL1 chr2 220430127 - STK11IP chr2 220467497 - Exonic hg19 OV TCGA-23-1023-01R 111 Out-of-Frame Intra-chr q35 q35 79589 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OBSL1-STK11IP OBSL1 chr2 220431310 - STK11IP chr2 220467497 - Exonic hg19 OV TCGA-23-1023-01R 111 In-Frame Intra-chr q35 q35 79590 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SCRIB-PUF60 SCRIB chr8 144889093 - PUF60 chr8 144906565 - Exonic hg19 OV TCGA-23-1023-01R 148 In-Frame Intra-chr Tumor suppressor gene Seq+ 79591 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SCRIB-PUF60 SCRIB chr8 144889093 - PUF60 chr8 144906568 - Exonic hg19 OV TCGA-23-1023-01R 148 In-Frame Intra-chr Tumor suppressor gene Seq+ 79592 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SCRIB-PUF60 SCRIB chr8 144890778 - PUF60 chr8 144906568 - Exonic hg19 OV TCGA-23-1023-01R 343 In-Frame Intra-chr Tumor suppressor gene Seq+ 79593 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCOLCE2-RPL8 PCOLCE2 chr3 142546413 - RPL8 chr8 146017263 + Exonic hg19 OV TCGA-09-0367-01A 113 Out-of-Frame Inter-chr q23 q24.3 79594 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC5A2-C16orf58 SLC5A2 chr16 31500928 - C16orf58 chr16 31503406 - Exonic hg19 OV TCGA-61-1743-01A 131 Out-of-Frame Intra-chr p11.2 p11.2 79595 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GPR39-LYPD1 GPR39 chr2 133402802 - LYPD1 chr2 133426040 - Exonic hg19 OV TCGA-61-1743-01A 187 Out-of-Frame Intra-chr q21.2 q21.2 79596 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GPR39-LYPD1 GPR39 chr2 133403029 - LYPD1 chr2 133426037 - Exonic hg19 OV TCGA-61-1743-01A 187 Out-of-Frame Intra-chr q21.2 q21.2 79597 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PDE3A-UNC45B PDE3A chr12 20704491 + UNC45B chr17 33478251 - Exonic hg19 OV TCGA-29-1774-01A 178 Out-of-Frame Inter-chr p12.2 q12 79598 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MGMT-PPP5C MGMT chr10 131294960 + PPP5C chr19 46857245 - Exonic hg19 OV TCGA-25-1324-01A 149 In-Frame Inter-chr q26.3 q13.32 79599 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LOC101927318-AQP5 LOC101927318 chr12 50356104 - AQP5 chr12 50358966 - Exonic hg19 OV TCGA-13-1481-01A 136 Out-of-Frame Intra-chr q13.12 79600 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SF1-CST6 SF1 chr11 64545458 - CST6 chr11 65779656 + Exonic hg19 OV TCGA-13-1489-02A 121 In-Frame Intra-chr q13.1 q13.1 Tumor suppressor gene Seq+ 79601 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SF1-CST6 SF1 chr11 64545833 - CST6 chr11 65779656 + Exonic hg19 OV TCGA-13-1489-02A 121 Out-of-Frame Intra-chr q13.1 q13.1 Tumor suppressor gene Seq+ 79602 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GPR39-LYPD1 GPR39 chr2 133402807 - LYPD1 chr2 133426045 - Exonic hg19 OV TCGA-59-2350-01A 177 Out-of-Frame Intra-chr q21.2 q21.2 79603 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMEM181-SYTL3 TMEM181 chr6 159010813 + SYTL3 chr6 159138591 - Exonic hg19 UVM TCGA-VD-A8KJ-01A 182 Out-of-Frame Intra-chr q25.3 q25.3 79604 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMEM181-SYTL3 TMEM181 chr6 159010813 + SYTL3 chr6 159156194 - Exonic hg19 UVM TCGA-VD-A8KJ-01A 128 Out-of-Frame Intra-chr q25.3 q25.3 79605 ChimerSeq Tophat-Fusion TCGA_RNA-Seq STX7-LMBRD1 STX7 chr6 132824584 - LMBRD1 chr6 70386432 - Exonic hg19 UVM TCGA-VD-A8KJ-01A 1072 In-Frame Intra-chr q23.2 q13 Seq+ 79606 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FOXO3-ARMC2 FOXO3 chr6 108883029 + ARMC2 chr6 109215667 + Exonic hg19 UVM TCGA-VD-A8KJ-01A 106 Out-of-Frame Intra-chr q21 Oncogene Tumor suppressor gene Transcription factor q21 Seq+ 79607 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SERINC1-NKAIN2 SERINC1 chr6 122792843 - NKAIN2 chr6 124242778 - Exonic hg19 UVM TCGA-VD-A8KJ-01A 105 In-Frame Intra-chr q22.31 q22.31 Seq+ 79608 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCCA-GGACT PCCA chr13 101179928 - GGACT chr13 101183468 - Exonic hg19 UVM TCGA-VD-A8KB-01A 1329 Out-of-Frame Intra-chr q32.3 q32.3 79609 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SEPT9-BCAS3 2009_ 9_ 1_ chr17 75398784 + BCAS3 chr17 59445687 + Exonic hg19 UVM TCGA-WC-A884-01A 154 In-Frame Intra-chr q23.2 Seq+ 79610 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC16A7-MSRB3 SLC16A7 chr12 60169255 + MSRB3 chr12 65786600 - Exonic hg19 SARC TCGA-DX-A1L0-01A 17 Out-of-Frame Intra-chr q14.1 q14.3 79611 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COL3A1-CLU COL3A1 chr2 189871083 - CLU chr8 27462659 - Exonic hg19 SARC TCGA-DX-A1L0-01A 14 In-Frame Inter-chr q32.2 p21.1 Tumor suppressor gene 79612 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MUSK-LPAR1 MUSK chr9 113547259 + LPAR1 chr9 113703700 + Exonic hg19 UCEC TCGA-AJ-A3BK-01A 3 Out-of-Frame Intra-chr q31.3 TK:Musk q31.3 79613 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSG101-YWHAB TSG101 chr11 18512110 + YWHAB chr20 43532656 + Exonic hg19 UCEC TCGA-A5-A2K3-01A 4 Out-of-Frame Inter-chr p15.1 Tumor suppressor gene q13.12 79614 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSG101-YWHAB TSG101 chr11 18512110 + YWHAB chr20 43532656 + Exonic hg19 UCEC TCGA-AJ-A6NU-01A 3 Out-of-Frame Inter-chr p15.1 Tumor suppressor gene q13.12 79615 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SNTB2-ZCRB1 SNTB2 chr16 69298725 + ZCRB1 chr12 42707539 - Exonic hg19 UCEC TCGA-KJ-A3U4-01A 18 In-Frame Inter-chr q12 79616 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ASCC3-GRIK2 ASCC3 chr6 101037509 - GRIK2 chr6 101864082 - Exonic hg19 UCEC TCGA-EY-A3QX-01A 9 Out-of-Frame Intra-chr q16.3 q16.3 Seq+ 79617 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CLIP1-KNTC1 CLIP1 chr12 122812493 - KNTC1 chr12 123105248 - Exonic hg19 UCEC TCGA-AX-A1C7-01A 2 Out-of-Frame Intra-chr q24.31 q24.31 Seq+ 79618 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GUK1-ARF1 GUK1 chr1 228334638 + ARF1 chr1 228285552 + Exonic hg19 UCEC TCGA-EY-A54A-01A 17 Out-of-Frame Intra-chr q42.13 q42.13 Tumor suppressor gene Seq+ 79619 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPL8-ACTG1 RPL8 chr8 146017395 + ACTG1 chr17 79479296 - Exonic hg19 UCEC TCGA-BK-A4ZD-01A 2 In-Frame Inter-chr q24.3 q25.3 79620 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MBOAT1-CDKAL1 MBOAT1 chr6 20212366 - CDKAL1 chr6 20632573 - Exonic hg19 OV TCGA-09-0367-01A 5 Out-of-Frame Intra-chr p22.3 p22.3 Seq+ 79621 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786455 + DHPS chr19 12786734 - Exonic hg19 OV TCGA-29-A5NZ-01A 26 Out-of-Frame Intra-chr p13.13 p13.13 79622 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AIMP2-EIF2AK1 AIMP2 chr7 6062821 - EIF2AK1 chr7 6064320 - Exonic hg19 OV TCGA-24-1549-01A 11 Out-of-Frame Intra-chr p22.1 Tumor suppressor gene p22.1 79623 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BCL2L13-GAB4 BCL2L13 chr22 18138597 + GAB4 chr22 17446157 - Exonic hg19 PRAD TCGA-HI-7168-01A 266 In-Frame Intra-chr q11.21 q11.1 Seq+ 79624 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-EJ-A65M-01A 184 Out-of-Frame Intra-chr q21.21 q21.21 79625 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-EJ-A7NJ-01A 174 Out-of-Frame Intra-chr q21.21 q21.21 79626 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-V1-A9OX-01A 364 Out-of-Frame Intra-chr q21.21 q21.21 79627 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-XK-AAJR-01A 220 Out-of-Frame Intra-chr q21.21 q21.21 79628 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCOLCE2-RPL8 PCOLCE2 chr3 142546216 + RPL8 chr8 146015284 - Exonic hg19 PRAD TCGA-HI-7168-01A 141 In-Frame Inter-chr q23 q24.3 79629 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SF3A2-AZU1 SF3A2 chr19 2243542 + AZU1 chr19 828229 + Exonic hg19 PRAD TCGA-KK-A8ID-01A 229 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 79630 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SF3A2-AZU1 SF3A2 chr19 2243571 + AZU1 chr19 828229 + Exonic hg19 PRAD TCGA-KK-A8ID-01A 229 In-Frame Intra-chr p13.3 p13.3 Seq+ 79631 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TAOK1-LINC01483 TAOK1 chr17 27825538 + LINC01483 chr17 67875106 + Exonic hg19 PRAD TCGA-EJ-5507-01A 112 Out-of-Frame Intra-chr q11.2 q24.3 79632 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GART-ERG GART chr21 34882089 - ERG chr21 39852161 + Exonic hg19 PRAD TCGA-HC-7230-01A 175 In-Frame Intra-chr q22.2 Oncogene Transcription factor 79633 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 PRAD TCGA-HC-7737-01A 447 Out-of-Frame Intra-chr q11.22 79634 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ATP11B-CARS ATP11B chr3 182563309 + CARS chr11 3026662 - Exonic hg19 PRAD TCGA-EJ-5507-01A 307 In-Frame Inter-chr q26.33 Oncogene Seq+ 79635 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSEN2-KLK2 TSEN2 chr3 12533590 + KLK2 chr19 51377976 + Exonic hg19 PRAD TCGA-G9-6378-01A 111 In-Frame Inter-chr p25.2 q13.33 Seq+ 79636 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSEN2-KLK2 TSEN2 chr3 12533590 + KLK2 chr19 51379727 + Exonic hg19 PRAD TCGA-G9-6378-01A 111 In-Frame Inter-chr p25.2 q13.33 Seq+ 79637 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSEN2-KLK2 TSEN2 chr3 12533715 + KLK2 chr19 51379727 + Exonic hg19 PRAD TCGA-G9-6378-01A 111 Out-of-Frame Inter-chr p25.2 q13.33 Seq+ 79638 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CDC14B-ANP32B CDC14B chr9 99334267 - ANP32B chr9 100767434 - Exonic hg19 PRAD TCGA-HC-8265-01A 146 Out-of-Frame Intra-chr q22.33 q22.33 79639 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-KK-A8ID-01A 367 Out-of-Frame Intra-chr q21.21 q21.21 79640 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACPP-TMPRSS2 ACPP chr3 132050576 + TMPRSS2 chr21 42843693 + Exonic hg19 PRAD TCGA-HC-7077-01A 3992 In-Frame Inter-chr q22.1 q22.3 79641 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACPP-TMPRSS2 ACPP chr3 132050814 + TMPRSS2 chr21 42843184 + Exonic hg19 PRAD TCGA-HC-7077-01A 3992 In-Frame Inter-chr q22.1 q22.3 79642 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMEM68-DPYS TMEM68 chr8 56656039 - DPYS chr8 105436616 - Exonic hg19 PRAD TCGA-FC-A4JI-01A 240 Out-of-Frame Intra-chr q12.1 q22.3 Seq+ 79643 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AP1S1-CCDC88C AP1S1 chr7 100803457 + CCDC88C chr14 91822325 + Exonic hg19 PRAD TCGA-HC-7077-01A 103 In-Frame Inter-chr q22.1 q32.12 79644 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 PRAD TCGA-VP-A872-01A 610 Out-of-Frame Intra-chr q11.22 79645 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NFKBIA-TTC6 NFKBIA chr14 35872397 - TTC6 chr14 38258158 + Exonic hg19 PRAD TCGA-VP-A872-01A 108 Out-of-Frame Intra-chr q13.2 q21.1 Seq+ 79646 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-EJ-7786-01A 175 Out-of-Frame Intra-chr q21.21 q21.21 79647 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-XJ-A83G-01A 203 Out-of-Frame Intra-chr q21.21 q21.21 79648 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TFG-ADGRG7 TFG chr3 100438901 + ADGRG7 chr3 100348441 + Exonic hg19 PRAD TCGA-CH-5767-01A 103 Out-of-Frame Intra-chr q12.2 q12.2 KB Pub 79649 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NSMAF-PI15 NSMAF chr8 59519505 - PI15 chr8 75737756 - Exonic hg19 PRAD TCGA-CH-5767-01A 2452 In-Frame Intra-chr q12.1 q21.13 79650 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NDRG1-DACT3 NDRG1 chr8 134292474 - DACT3 chr19 47156331 - Exonic hg19 PRAD TCGA-EJ-5498-01A 120 In-Frame Inter-chr q24.22 Tumor suppressor gene q13.32 Seq+ 79651 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LOC105372441-TMPRSS2 LOC105372441 chr19 51344709 + TMPRSS2 chr21 42866282 + Exonic hg19 PRAD TCGA-V1-A9O9-01A 132 Out-of-Frame Inter-chr q22.3 79652 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACPP-ATP2C1 ACPP chr3 132036419 + ATP2C1 chr3 130649259 + Exonic hg19 PRAD TCGA-V1-A9O9-01A 244 In-Frame Intra-chr q22.1 q22.1 Seq+ 79653 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC30A4-VPS53 SLC30A4 chr15 45814161 - VPS53 chr17 565134 - Exonic hg19 PRAD TCGA-V1-A9O9-01A 139 Out-of-Frame Inter-chr q21.1 Tumor suppressor gene Seq+ 79654 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC30A4-VPS53 SLC30A4 chr15 45814161 - VPS53 chr17 579929 - Exonic hg19 PRAD TCGA-V1-A9O9-01A 109 In-Frame Inter-chr q21.1 Tumor suppressor gene Seq+ 79655 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ATP2C1-ACPP ATP2C1 chr3 130675022 + ACPP chr3 132041470 - Exonic hg19 PRAD TCGA-V1-A9O9-01A 150 In-Frame Intra-chr q22.1 q22.1 79656 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PHF10-CLIC2 PHF10 chr6 170105369 + CLIC2 chrX 154522722 - Exonic hg19 PRAD TCGA-QU-A6IM-01A 151 In-Frame Inter-chr q27 q28 79657 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PAICS-CSMD1 PAICS chr4 57325635 + CSMD1 chr8 4645504 + Exonic hg19 PRAD TCGA-G9-6347-01A 100 In-Frame Inter-chr q12 p23.2 Tumor suppressor gene 79658 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NOTCH2-NBPF20 NOTCH2 chr1 120464858 - NBPF20 chr1 145004782 + Exonic hg19 PRAD TCGA-G9-6338-01A 215 Out-of-Frame Intra-chr p12 Oncogene Tumor suppressor gene q21.1 79659 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CSPP1-CPA6 CSPP1 chr8 67976730 + CPA6 chr8 68346474 - Exonic hg19 PRAD TCGA-YL-A9WY-01A 109 Out-of-Frame Intra-chr q13.1 q13.2 Seq+ 79660 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CSPP1-CPA6 CSPP1 chr8 67976772 + CPA6 chr8 68346474 - Exonic hg19 PRAD TCGA-YL-A9WY-01A 109 Out-of-Frame Intra-chr q13.1 q13.2 Seq+ 79661 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-BRAF TMPRSS2 chr21 42866282 - BRAF chr7 140481492 - Exonic hg19 PRAD TCGA-FC-A6HD-01A 170 Out-of-Frame Inter-chr q22.3 q34 TKL:RAF Oncogene Seq+ 79662 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-BRAF TMPRSS2 chr21 42870045 - BRAF chr7 140481492 - Exonic hg19 PRAD TCGA-FC-A6HD-01A 172 In-Frame Inter-chr q22.3 q34 TKL:RAF Oncogene Seq+ 79663 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-EJ-7218-01B 120 Out-of-Frame Intra-chr q21.21 q21.21 79664 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677319 + IGLL5 chr22 23235958 + Exonic hg19 PRAD TCGA-V1-A8MM-01A 273 Out-of-Frame Intra-chr q11.22 79665 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ATAD1-ERC1 ATAD1 chr10 89574192 - ERC1 chr12 1219393 - Exonic hg19 PRAD TCGA-HC-7749-01A 315 In-Frame Inter-chr 79666 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CD63-PKP2 CD63 chr12 56119353 - PKP2 chr12 32955489 - Exonic hg19 PRAD TCGA-HC-8264-01B 138 Out-of-Frame Intra-chr q13.2 p11.21 Seq+ 79667 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-G9-6496-01A 189 Out-of-Frame Intra-chr q21.21 q21.21 79668 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-KK-A8IG-01A 103 Out-of-Frame Intra-chr q21.21 q21.21 79669 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-ZG-A9L0-01A 311 Out-of-Frame Intra-chr q21.21 q21.21 79670 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UFC1-MAGI2 UFC1 chr1 161127093 + MAGI2 chr7 78116031 + Exonic hg19 PRAD TCGA-EJ-7123-01A 177 Out-of-Frame Inter-chr q23.3 q21.11 79671 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ASH1L-LINC01133 ASH1L chr1 155531943 - LINC01133 chr1 159931126 + Exonic hg19 PRAD TCGA-EJ-5518-01A 155 Out-of-Frame Intra-chr q22 Transcription factor q23.2 79672 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NCOR2-TTC39C NCOR2 chr12 124815390 - TTC39C chr18 21701016 - Exonic hg19 PRAD TCGA-VN-A88M-01A 137 Out-of-Frame Inter-chr q24.31 q11.2 79673 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRKDC-NEDD4L PRKDC chr8 48733342 - NEDD4L chr18 56024483 - Exonic hg19 PRAD TCGA-G9-6342-01A 172 Out-of-Frame Inter-chr q11.21 Oncogene q21.31 Tumor suppressor gene 79674 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRKDC-NEDD4L PRKDC chr8 48740628 - NEDD4L chr18 56024483 - Exonic hg19 PRAD TCGA-G9-6342-01A 172 Out-of-Frame Inter-chr q11.21 Oncogene q21.31 Tumor suppressor gene 79675 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RABGAP1L-UCHL5 RABGAP1L chr1 174301187 + UCHL5 chr1 193020883 + Exonic hg19 PRAD TCGA-EJ-5518-01A 110 In-Frame Intra-chr q25.1 q31.2 79676 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-HC-A6AO-01A 194 Out-of-Frame Intra-chr q21.21 q21.21 79677 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT18-KCTD1 PCAT18 chr18 24283355 - KCTD1 chr18 24081213 - Exonic hg19 PRAD TCGA-G9-6499-11A 247 Out-of-Frame Intra-chr q11.2 q11.2 79678 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CCDC3-LINC01535 CCDC3 chr10 13033641 - LINC01535 chr19 37748928 - Exonic hg19 PRAD TCGA-V1-A9O5-06A 158 Out-of-Frame Inter-chr p13 q13.12 79679 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF780B-LOC105372441 ZNF780B chr19 40553281 - LOC105372441 chr19 51349974 + Exonic hg19 PRAD TCGA-V1-A9O5-06A 264 Out-of-Frame Intra-chr Transcription factor 79680 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF780B-LOC105372441 ZNF780B chr19 40553281 - LOC105372441 chr19 51349977 + Exonic hg19 PRAD TCGA-V1-A9O5-06A 264 Out-of-Frame Intra-chr Transcription factor 79681 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF780B-LOC105372441 ZNF780B chr19 40553312 - LOC105372441 chr19 51349974 + Exonic hg19 PRAD TCGA-V1-A9O5-06A 264 Out-of-Frame Intra-chr Transcription factor 79682 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CAMK1D-FBL CAMK1D chr10 12569841 + FBL chr19 40325307 + Exonic hg19 PRAD TCGA-V1-A9O5-06A 245 Out-of-Frame Inter-chr p13 79683 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-J9-A8CP-01A 346 Out-of-Frame Intra-chr q21.21 q21.21 79684 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-TP-A8TV-01A 175 Out-of-Frame Intra-chr q21.21 q21.21 79685 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SYMPK-GYS1 SYMPK chr19 46330801 - GYS1 chr19 49494359 - Exonic hg19 PRAD TCGA-V1-A9O5-06A 305 Out-of-Frame Intra-chr q13.32 q13.33 79686 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KLK2-FGFR2 KLK2 chr19 51376774 + FGFR2 chr10 123310972 - Exonic hg19 PRAD TCGA-V1-A9O5-06A 4296 In-Frame Inter-chr q13.33 q26.13 TK:FGFR Oncogene KB Pub Seq+ 79687 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTPRK-ECHDC1 PTPRK chr6 128561179 - ECHDC1 chr6 127611421 - Exonic hg19 PRAD TCGA-G9-6333-01A 157 Out-of-Frame Intra-chr Tumor suppressor gene q22.33 Seq+ 79688 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 PRAD TCGA-V1-A8MG-01A 107 Out-of-Frame Intra-chr q11.22 79689 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TENM2-TMPRSS2 TENM2 chr5 167612202 + TMPRSS2 chr21 42866282 + Exonic hg19 PRAD TCGA-TK-A8OK-01A 243 Out-of-Frame Inter-chr q34 q22.3 79690 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-G9-6333-01A 418 Out-of-Frame Intra-chr q21.21 q21.21 79691 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TM2D3-PTRF TM2D3 chr15 102190206 - PTRF chr17 40557405 - Exonic hg19 PRAD TCGA-EJ-5511-01A 917 In-Frame Inter-chr q26.3 Seq+ 79692 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TM2D3-PTRF TM2D3 chr15 102192473 - PTRF chr17 40557405 - Exonic hg19 PRAD TCGA-EJ-5511-01A 917 Out-of-Frame Inter-chr q26.3 Seq+ 79693 ChimerSeq Tophat-Fusion TCGA_RNA-Seq STAT3-ETV4 STAT3 chr17 40468806 - ETV4 chr17 41611352 - Exonic hg19 PRAD TCGA-EJ-5511-01A 438 In-Frame Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q21.31 Oncogene Transcription factor Seq+ 79694 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAF1-DNAJC3 RAF1 chr3 12644582 - DNAJC3 chr13 96416206 - Exonic hg19 PRAD TCGA-H9-7775-01A 830 Out-of-Frame Inter-chr p25.2 TKL:RAF Oncogene q32.1 79695 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PLPP1-CDC20B PLPP1 chr5 54737678 - CDC20B chr5 54442683 - Exonic hg19 PRAD TCGA-CH-5766-01A 874 Out-of-Frame Intra-chr q11.2 q11.2 Seq+ 79696 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HDLBP-TMC1 HDLBP chr2 242186470 - TMC1 chr9 75445366 + Exonic hg19 PRAD TCGA-HC-A631-01A 422 Out-of-Frame Inter-chr q37.3 q21.13 Seq+ 79697 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRUNE2-WDR34 PRUNE2 chr9 79399198 - WDR34 chr9 131402969 + Exonic hg19 PRAD TCGA-HC-A631-01A 760 Out-of-Frame Intra-chr q21.2 q34.11 79698 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRUNE2-WDR34 PRUNE2 chr9 79403337 - WDR34 chr9 131402969 + Exonic hg19 PRAD TCGA-HC-A631-01A 766 Out-of-Frame Intra-chr q21.2 q34.11 79699 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRUNE2-WDR34 PRUNE2 chr9 79415576 - WDR34 chr9 131402969 + Exonic hg19 PRAD TCGA-HC-A631-01A 218 In-Frame Intra-chr q21.2 q34.11 79700 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRUNE2-WDR34 PRUNE2 chr9 79423498 - WDR34 chr9 131402969 + Exonic hg19 PRAD TCGA-HC-A631-01A 219 Out-of-Frame Intra-chr q21.2 q34.11 79701 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UNC50-KIAA1211L UNC50 chr2 99227357 + KIAA1211L chr2 99539854 + Exonic hg19 PRAD TCGA-KK-A7B1-01A 139 Out-of-Frame Intra-chr q11.2 q11.2 79702 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TTC32-HDLBP TTC32 chr2 20101236 - HDLBP chr2 242170358 - Exonic hg19 PRAD TCGA-HC-A631-01A 272 Out-of-Frame Intra-chr p24.1 q37.3 Seq+ 79703 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-EJ-7317-01A 153 Out-of-Frame Intra-chr q21.21 q21.21 79704 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPP1R8-SPATA6 PPP1R8 chr1 28169781 + SPATA6 chr1 48791321 - Exonic hg19 PRAD TCGA-EJ-7123-11A 100 In-Frame Intra-chr p35.3 p33 79705 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-HC-A6AP-01A 145 Out-of-Frame Intra-chr q21.21 q21.21 79706 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PARK7-FAM186B PARK7 chr1 8025447 + FAM186B chr12 49988964 + Exonic hg19 PRAD TCGA-HC-7736-01A 109 In-Frame Inter-chr p36.23 Tumor suppressor gene q13.12 79707 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTEN-RPL11 PTEN chr10 89705655 + RPL11 chr1 24021153 + Exonic hg19 PRAD TCGA-EJ-5512-01A 155 Out-of-Frame Inter-chr q23.31 Oncogene Tumor suppressor gene p36.11 Tumor suppressor gene 79708 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SPTBN1-ECI2 SPTBN1 chr2 54826379 + ECI2 chr6 4133934 - Exonic hg19 PRAD TCGA-KK-A8II-01A 118 Out-of-Frame Inter-chr p16.2 Tumor suppressor gene p25.2 Seq+ 79709 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-XJ-A9DX-01A 201 Out-of-Frame Intra-chr q21.21 q21.21 79710 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT18-KCTD1 PCAT18 chr18 24283355 - KCTD1 chr18 24081213 - Exonic hg19 PRAD TCGA-J4-8198-01A 107 Out-of-Frame Intra-chr q11.2 q11.2 79711 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HBS1L-IL9 HBS1L chr6 135371719 - IL9 chr5 135228198 - Exonic hg19 PRAD TCGA-EJ-7794-01A 171 Out-of-Frame Inter-chr q23.3 q31.1 Seq+ 79712 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TANC2-DDX5 TANC2 chr17 61498504 + DDX5 chr17 62496887 + Exonic hg19 PRAD TCGA-KK-A6E1-01A 329 Out-of-Frame Intra-chr q23.2 q23.3 79713 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LRP1-OS9 LRP1 chr12 57552420 + OS9 chr12 58113881 + Exonic hg19 PRAD TCGA-H9-A6BY-01A 347 In-Frame Intra-chr q13.3 q13.3 Seq+ 79714 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LRP1-OS9 LRP1 chr12 57552420 + OS9 chr12 58114188 + Exonic hg19 PRAD TCGA-H9-A6BY-01A 347 In-Frame Intra-chr q13.3 q13.3 Seq+ 79715 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SKIV2L2-SCCPDH SKIV2L2 chr5 54711959 + SCCPDH chr1 246890193 + Exonic hg19 PRAD TCGA-EJ-5519-01A 145 In-Frame Inter-chr q11.2 q44 Seq+ 79716 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HSPA9-LOC101929099 HSPA9 chr5 137902312 - LOC101929099 chr1 117592953 - Exonic hg19 PRAD TCGA-KK-A6E1-01A 290 Out-of-Frame Inter-chr q31.2 79717 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PMEPA1-ETV4 PMEPA1 chr20 56284529 - ETV4 chr17 41613846 - Exonic hg19 PRAD TCGA-CH-5762-01A 694 In-Frame Inter-chr q13.31 q21.31 Oncogene Transcription factor Seq+ 79718 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RYK-KALRN RYK chr3 133907680 - KALRN chr3 124149502 + Exonic hg19 PRAD TCGA-KK-A6E1-01A 184 Out-of-Frame Intra-chr q22.2 TK:Ryk q21.1 Seq+ 79719 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-EJ-5509-01A 241 Out-of-Frame Intra-chr q21.21 q21.21 79720 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-EJ-A65G-01A 146 Out-of-Frame Intra-chr q21.21 q21.21 79721 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NSRP1-FAM73A NSRP1 chr17 28505110 + FAM73A chr1 78312806 + Exonic hg19 PRAD TCGA-J9-A52D-01A 140 In-Frame Inter-chr q11.2 79722 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ATF7IP TMPRSS2 chr21 42870045 - ATF7IP chr12 14613428 + Exonic hg19 PRAD TCGA-EJ-7784-01A 1205 Out-of-Frame Inter-chr q22.3 p13.1 Seq+ 79723 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-IRS2 TMPRSS2 chr21 42860320 - IRS2 chr13 110408654 - Exonic hg19 PRAD TCGA-HI-7171-01A 1016 In-Frame Inter-chr q22.3 q34 Oncogene Seq+ 79724 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EIF2AK4-BUB1B EIF2AK4 chr15 40309442 + BUB1B chr15 40504699 + Exonic hg19 PRAD TCGA-CH-5771-01A 135 In-Frame Intra-chr q15.1 q15.1 Oncogene Seq+ 79725 ChimerSeq Tophat-Fusion TCGA_RNA-Seq THSD4-TMPRSS2 THSD4 chr15 71773149 + TMPRSS2 chr21 42851098 + Exonic hg19 PRAD TCGA-EJ-5525-01A 1026 In-Frame Inter-chr q23 q22.3 79726 ChimerSeq Tophat-Fusion TCGA_RNA-Seq THSD4-TMPRSS2 THSD4 chr15 71774011 + TMPRSS2 chr21 42851098 + Exonic hg19 PRAD TCGA-EJ-5525-01A 1026 Out-of-Frame Inter-chr q23 q22.3 79727 ChimerSeq Tophat-Fusion TCGA_RNA-Seq THSD4-TMPRSS2 THSD4 chr15 71799916 + TMPRSS2 chr21 42851098 + Exonic hg19 PRAD TCGA-EJ-5525-01A 624 Out-of-Frame Inter-chr q23 q22.3 79728 ChimerSeq Tophat-Fusion TCGA_RNA-Seq THSD4-TMPRSS2 THSD4 chr15 71805267 + TMPRSS2 chr21 42851098 + Exonic hg19 PRAD TCGA-EJ-5525-01A 624 In-Frame Inter-chr q23 q22.3 79729 ChimerSeq Tophat-Fusion TCGA_RNA-Seq THSD4-TMPRSS2 THSD4 chr15 71807505 + TMPRSS2 chr21 42848882 + Exonic hg19 PRAD TCGA-EJ-5525-01A 614 Out-of-Frame Inter-chr q23 q22.3 79730 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MYH11-SEMG1 MYH11 chr16 15826490 + SEMG1 chr20 43836173 + Exonic hg19 PRAD TCGA-HC-7745-11A 167 Out-of-Frame Inter-chr Oncogene q13.12 79731 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-V1-A9Z7-01A 167 Out-of-Frame Intra-chr q21.21 q21.21 79732 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HNRNPK-SLC16A11 HNRNPK chr9 86589154 - SLC16A11 chr17 6945045 - Exonic hg19 PRAD TCGA-HI-7171-01A 594 Out-of-Frame Inter-chr q21.32 p13.1 Seq+ 79733 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NBR1-MEIOC NBR1 chr17 41345654 + MEIOC chr17 42751343 + Exonic hg19 PRAD TCGA-YL-A8SC-01A 223 Out-of-Frame Intra-chr q21.31 q21.31 79734 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BANK1-GSTCD BANK1 chr4 102965063 + GSTCD chr4 106744110 + Exonic hg19 PRAD TCGA-YL-A8S8-01A 111 In-Frame Intra-chr q24 q24 Seq+ 79735 ChimerSeq Tophat-Fusion TCGA_RNA-Seq APOLD1-DLGAP4 APOLD1 chr12 12909338 + DLGAP4 chr20 35125619 - Exonic hg19 PRAD TCGA-EJ-7327-01A 131 Out-of-Frame Inter-chr p13.1 q11.23 79736 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC45A3-EPB41L4B SLC45A3 chr1 205628616 - EPB41L4B chr9 112042200 - Exonic hg19 PRAD TCGA-HC-7211-01A 131 Out-of-Frame Inter-chr q32.1 q31.3 Seq+ 79737 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC45A3-EPB41L4B SLC45A3 chr1 205630988 - EPB41L4B chr9 112042200 - Exonic hg19 PRAD TCGA-HC-7211-01A 131 In-Frame Inter-chr q32.1 q31.3 Seq+ 79738 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 PRAD TCGA-EJ-7794-11A 134 Out-of-Frame Intra-chr q11.22 79739 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACPP-SKIL ACPP chr3 132036419 + SKIL chr3 170101818 - Exonic hg19 PRAD TCGA-HC-7211-01A 2266 In-Frame Intra-chr q22.1 q26.2 Tumor suppressor gene Transcription factor 79740 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-HC-7211-01A 476 Out-of-Frame Intra-chr q21.21 q21.21 79741 ChimerSeq Tophat-Fusion TCGA_RNA-Seq G3BP1-TMPRSS2 G3BP1 chr5 151177547 + TMPRSS2 chr21 42842574 + Exonic hg19 PRAD TCGA-HC-8266-01A 1860 In-Frame Inter-chr q33.1 q22.3 79742 ChimerSeq Tophat-Fusion TCGA_RNA-Seq G3BP1-TMPRSS2 G3BP1 chr5 151179517 + TMPRSS2 chr21 42842503 + Exonic hg19 PRAD TCGA-HC-8266-01A 1860 In-Frame Inter-chr q33.1 q22.3 79743 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GAK-RBM39 GAK chr4 861965 - RBM39 chr20 34295092 + Exonic hg19 PRAD TCGA-KC-A7FA-01A 108 Out-of-Frame Inter-chr p16.3 Other:NAK q11.22 79744 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SSR1-RTTN SSR1 chr6 7298979 - RTTN chr18 67755109 + Exonic hg19 PRAD TCGA-HC-8266-01A 102 Out-of-Frame Inter-chr p24.3 q22.2 79745 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ITGA1-HINT1 ITGA1 chr5 52228365 + HINT1 chr5 130500787 + Exonic hg19 PRAD TCGA-HC-8266-01A 126 Out-of-Frame Intra-chr q11.2 q23.3 Tumor suppressor gene 79746 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-EJ-5504-01A 101 Out-of-Frame Intra-chr q21.21 q21.21 79747 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-MRPS6 TMPRSS2 chr21 42845251 - MRPS6 chr21 35497640 + Exonic hg19 PRAD TCGA-EJ-8469-01A 557 Out-of-Frame Intra-chr q22.3 q22.11 Seq+ 79748 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZFHX3-GLG1 ZFHX3 chr16 72930288 - GLG1 chr16 74640556 + Exonic hg19 PRAD TCGA-EJ-5521-01A 293 Out-of-Frame Intra-chr q22.3 Tumor suppressor gene Transcription factor q23.1 79749 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NBEA-ABCC4 NBEA chr13 35736823 + ABCC4 chr13 95735393 + Exonic hg19 PRAD TCGA-CH-5765-01A 2128 Out-of-Frame Intra-chr q13.3 q32.1 79750 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CXADR-APP CXADR chr21 18885489 + APP chr21 27425663 - Exonic hg19 PRAD TCGA-CH-5792-01A 829 In-Frame Intra-chr q21.1 q21.3 Seq+ 79751 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GSR-RBPMS GSR chr8 30585046 - RBPMS chr8 30416403 + Exonic hg19 PRAD TCGA-EJ-5521-01A 116 In-Frame Intra-chr p12 p12 Seq+ 79752 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-V1-A9OF-01A 112 Out-of-Frame Intra-chr q21.21 q21.21 79753 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-VN-A88O-01A 269 Out-of-Frame Intra-chr q21.21 q21.21 79754 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZFHX3-ENY2 ZFHX3 chr16 72845475 - ENY2 chr8 110355633 + Exonic hg19 PRAD TCGA-YL-A9WL-01A 450 Out-of-Frame Inter-chr q22.3 Tumor suppressor gene Transcription factor q23.1 Seq+ 79755 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTEN-ATRNL1 PTEN chr10 89625449 + ATRNL1 chr10 117187630 + Exonic hg19 PRAD TCGA-YL-A9WL-01A 125 In-Frame Intra-chr q23.31 Oncogene Tumor suppressor gene q25.3 79756 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MBD3-GAK MBD3 chr19 1591563 - GAK chr4 871596 - Exonic hg19 PRAD TCGA-YL-A9WL-01A 106 Out-of-Frame Inter-chr p13.3 Transcription factor p16.3 Other:NAK Seq+ 79757 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MBD3-GAK MBD3 chr19 1592520 - GAK chr4 871596 - Exonic hg19 PRAD TCGA-YL-A9WL-01A 106 In-Frame Inter-chr p13.3 Transcription factor p16.3 Other:NAK Seq+ 79758 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UBE2D3-CA10 UBE2D3 chr4 103747639 - CA10 chr17 49726612 - Exonic hg19 PRAD TCGA-EJ-7781-01A 205 Out-of-Frame Inter-chr q24 q22 Seq+ 79759 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PACS1-TMPRSS2 PACS1 chr11 65905097 + TMPRSS2 chr21 42860320 + Exonic hg19 PRAD TCGA-EJ-5516-01A 128 Out-of-Frame Inter-chr q13.1 q22.3 79760 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MYOM3-PTPRU MYOM3 chr1 24390533 - PTPRU chr1 29587411 - Exonic hg19 PRAD TCGA-ZG-A9KY-01A 209 In-Frame Intra-chr p36.11 p35.3 79761 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SENP6-OOEP SENP6 chr6 76344526 + OOEP chr6 74079107 - Exonic hg19 PRAD TCGA-HC-7210-01A 107 Out-of-Frame Intra-chr q14.1 q13 Seq+ 79762 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LINC01237-CPNE9 LINC01237 chr2 242824785 + CPNE9 chr3 9754224 + Exonic hg19 PRAD TCGA-EJ-7788-01A 128 Out-of-Frame Inter-chr q37.3 p25.3 79763 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LINC01237-CPNE9 LINC01237 chr2 242829999 + CPNE9 chr3 9754224 + Exonic hg19 PRAD TCGA-EJ-7788-01A 129 Out-of-Frame Inter-chr q37.3 p25.3 79764 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CSNK1A1-PPARGC1B CSNK1A1 chr5 148929637 - PPARGC1B chr5 149124920 - Exonic hg19 PRAD TCGA-ZG-A9KY-01A 218 Out-of-Frame Intra-chr q32 Tumor suppressor gene q32 79765 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TCF3-JAK2 TCF3 chr19 1615718 - JAK2 chr9 5112398 + Exonic hg19 PRAD TCGA-EJ-AB27-01A 102 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p24.1 TK:JakA Oncogene 79766 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KDM2A-C11orf80 KDM2A chr11 66888828 + C11orf80 chr11 66555630 + Exonic hg19 PRAD TCGA-EJ-A46G-01A 197 Out-of-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 79767 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KDM2A-C11orf80 KDM2A chr11 66888828 + C11orf80 chr11 66563751 + Exonic hg19 PRAD TCGA-EJ-A46G-01A 249 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 79768 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KDM2A-C11orf80 KDM2A chr11 66888828 + C11orf80 chr11 66568111 + Exonic hg19 PRAD TCGA-EJ-A46G-01A 122 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 79769 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ADGRL2-AK5 ADGRL2 chr1 82302741 + AK5 chr1 77759477 + Exonic hg19 PRAD TCGA-EJ-A46G-01A 198 Out-of-Frame Intra-chr p31.1 p31.1 Seq+ 79770 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ADGRL2-AK5 ADGRL2 chr1 82302741 + AK5 chr1 77763243 + Exonic hg19 PRAD TCGA-EJ-A46G-01A 198 Out-of-Frame Intra-chr p31.1 p31.1 Seq+ 79771 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NRAP-VWA2 NRAP chr10 115361141 - VWA2 chr10 116032692 - Exonic hg19 PRAD TCGA-EJ-A46G-01A 102 In-Frame Intra-chr q25.3 q25.3 79772 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NRAP-VWA2 NRAP chr10 115368559 - VWA2 chr10 116032692 - Exonic hg19 PRAD TCGA-EJ-A46G-01A 102 Out-of-Frame Intra-chr q25.3 q25.3 79773 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MUC12-PLOD3 MUC12 chr7 100657719 + PLOD3 chr7 100850858 + Exonic hg19 PRAD TCGA-EJ-A46G-01A 143 CDS-3'UTR Intra-chr q22.1 q22.1 79774 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-G9-6343-01A 177 Out-of-Frame Intra-chr q21.21 q21.21 79775 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRKCI-SLC30A4 PRKCI chr3 170009641 - SLC30A4 chr15 45806160 - Exonic hg19 PRAD TCGA-YL-A8SJ-01B 245 Out-of-Frame Inter-chr q26.2 q21.1 79776 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRKCI-SLC30A4 PRKCI chr3 170011170 - SLC30A4 chr15 45806160 - Exonic hg19 PRAD TCGA-YL-A8SJ-01B 245 In-Frame Inter-chr q26.2 q21.1 79777 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 PRAD TCGA-HC-A8CY-01A 554 Out-of-Frame Intra-chr q11.22 79778 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FGFR3-AES FGFR3 chr4 1808660 + AES chr19 3061254 - Exonic hg19 PRAD TCGA-EJ-A7NM-01A 467 In-Frame Inter-chr p16.3 TK:FGFR Oncogene p13.3 Seq+ 79779 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TFG-ADGRG7 TFG chr3 100438901 + ADGRG7 chr3 100348441 + Exonic hg19 PRAD TCGA-CH-5767-11B 115 Out-of-Frame Intra-chr q12.2 q12.2 KB Pub 79780 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-KK-A8I8-01A 230 Out-of-Frame Intra-chr q21.21 q21.21 79781 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIF13B-CA10 KIF13B chr8 28988049 - CA10 chr17 49790353 + Exonic hg19 PRAD TCGA-EJ-5524-01A 171 In-Frame Inter-chr p12 q22 79782 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAB11FIP3-UNKL RAB11FIP3 chr16 532735 + UNKL chr16 1461929 + Exonic hg19 PRAD TCGA-XQ-A8TA-01A 362 Out-of-Frame Intra-chr p13.3 79783 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SUSD1-GLE1 SUSD1 chr9 114814243 - GLE1 chr9 131295892 - Exonic hg19 PRAD TCGA-XQ-A8TA-01A 107 Out-of-Frame Intra-chr q32 q34.11 79784 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SUSD1-GLE1 SUSD1 chr9 114814678 - GLE1 chr9 131291278 - Exonic hg19 PRAD TCGA-XQ-A8TA-01A 107 Out-of-Frame Intra-chr q32 q34.11 79785 ChimerSeq Tophat-Fusion TCGA_RNA-Seq VAV2-COL27A1 VAV2 chr9 136804224 - COL27A1 chr9 117047003 + Exonic hg19 PRAD TCGA-XQ-A8TA-01A 150 In-Frame Intra-chr q34.2 q32 Seq+ 79786 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CPSF4-SARNP CPSF4 chr7 99040816 - SARNP chr12 56194410 - Exonic hg19 PRAD TCGA-QU-A6IO-01A 141 In-Frame Inter-chr q22.1 q13.2 79787 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANTXR2-PCAT4 ANTXR2 chr4 80952776 - PCAT4 chr4 80782443 + Exonic hg19 PRAD TCGA-EJ-7312-01B 284 Out-of-Frame Intra-chr q21.21 q21.21 Seq+ 79788 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NFIX-CAPN12 NFIX chr19 13192668 + CAPN12 chr19 39233167 - Exonic hg19 PRAD TCGA-HC-A4ZV-01A 300 Out-of-Frame Intra-chr p13.13 Transcription factor q13.2 Seq+ 79789 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KCTD3-NDNF KCTD3 chr1 215781982 + NDNF chr4 121964183 + Exonic hg19 PRAD TCGA-HC-8257-01A 146 Out-of-Frame Inter-chr q41 q27 79790 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-EJ-5506-01A 199 Out-of-Frame Intra-chr q21.21 q21.21 79791 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GALNT7-CEP44 GALNT7 chr4 174225268 + CEP44 chr4 175252632 + Exonic hg19 PRAD TCGA-VP-AA1N-01A 331 In-Frame Intra-chr q34.1 q34.1 Seq+ 79792 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 PRAD TCGA-KK-A59V-01A 320 Out-of-Frame Intra-chr q11.22 79793 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SNX19-USP28 SNX19 chr11 130784160 - USP28 chr11 113675767 - Exonic hg19 PRAD TCGA-HC-7232-01A 108 In-Frame Intra-chr q25 q23.2 Seq+ 79794 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MAL2-ZNF770 MAL2 chr8 120234140 + ZNF770 chr15 35274554 + Exonic hg19 PRAD TCGA-V1-A8MF-01A 101 Out-of-Frame Inter-chr q24.12 q14 Transcription factor 79795 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-KK-A8IF-01A 308 Out-of-Frame Intra-chr q21.21 q21.21 79796 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HFM1-PPEF2 HFM1 chr1 91852972 + PPEF2 chr4 76807213 - Exonic hg19 PRAD TCGA-G9-6364-01A 164 Out-of-Frame Inter-chr p22.2 q21.1 79797 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACPP-SAFB2 ACPP chr3 132036419 + SAFB2 chr19 5616345 - Exonic hg19 PRAD TCGA-HC-7233-01A 418 In-Frame Inter-chr q22.1 p13.3 Tumor suppressor gene Transcription factor Seq+ 79798 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTGS2-SEMG1 PTGS2 chr1 186648554 + SEMG1 chr20 43836884 + Exonic hg19 PRAD TCGA-HC-8258-11A 182 In-Frame Inter-chr q31.1 Oncogene q13.12 79799 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-SEMG1 PCBD2 chr5 134262466 + SEMG1 chr20 43836613 + Exonic hg19 PRAD TCGA-HC-8258-11A 128 Out-of-Frame Inter-chr q31.1 q13.12 79800 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF144B-PPP3CA RNF144B chr6 18399929 + PPP3CA chr4 102117272 - Exonic hg19 PRAD TCGA-HC-7209-01A 628 Out-of-Frame Inter-chr p22.3 q24 Seq+ 79801 ChimerSeq Tophat-Fusion TCGA_RNA-Seq STX3-MS4A15 STX3 chr11 59523107 + MS4A15 chr11 60535005 + Exonic hg19 PRAD TCGA-HC-7209-01A 114 In-Frame Intra-chr q12.1 q12.2 Seq+ 79802 ChimerSeq Tophat-Fusion TCGA_RNA-Seq STX3-MS4A15 STX3 chr11 59523107 + MS4A15 chr11 60535039 + Exonic hg19 PRAD TCGA-HC-7209-01A 114 In-Frame Intra-chr q12.1 q12.2 Seq+ 79803 ChimerSeq Tophat-Fusion TCGA_RNA-Seq STX3-MS4A15 STX3 chr11 59523107 + MS4A15 chr11 60538763 + Exonic hg19 PRAD TCGA-HC-7209-01A 114 In-Frame Intra-chr q12.1 q12.2 Seq+ 79804 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF598-TSC2 ZNF598 chr16 2059524 - TSC2 chr16 2111470 - Exonic hg19 PRAD TCGA-HC-8258-01A 112 In-Frame Intra-chr p13.3 Transcription factor p13.3 Oncogene Tumor suppressor gene 79805 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-G9-7510-01A 117 Out-of-Frame Intra-chr q21.21 q21.21 79806 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-HC-8258-01A 110 Out-of-Frame Intra-chr q21.21 q21.21 79807 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MED13L-TAOK3 MED13L chr12 116675272 - TAOK3 chr12 118588962 - Exonic hg19 PRAD TCGA-YJ-A8SW-01A 128 Out-of-Frame Intra-chr q24.21 q24.23 Seq+ 79808 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC25A21-TTC6 SLC25A21 chr14 37318164 - TTC6 chr14 38065212 - Exonic hg19 PRAD TCGA-G9-6366-01A 110 Out-of-Frame Intra-chr q13.3 q21.1 79809 ChimerSeq Tophat-Fusion TCGA_RNA-Seq STK39-IGFBP5 STK39 chr2 169004771 - IGFBP5 chr2 217559161 + Exonic hg19 PRAD TCGA-YJ-A8SW-01A 162 Out-of-Frame Intra-chr q24.3 q35 Tumor suppressor gene 79810 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACPP-CASC11 ACPP chr3 132051187 + CASC11 chr8 128746200 + Exonic hg19 PRAD TCGA-G9-6366-01A 16127 Out-of-Frame Inter-chr q22.1 q24.21 79811 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMIGD3-DDX20 TMIGD3 chr1 112026138 - DDX20 chr1 112304958 - Exonic hg19 PRAD TCGA-YJ-A8SW-01A 130 Out-of-Frame Intra-chr p13.2 p13.2 79812 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KLK2-PVRL2 KLK2 chr19 51376774 + PVRL2 chr19 45368527 + Exonic hg19 PRAD TCGA-G9-7509-01A 139 In-Frame Intra-chr q13.33 Seq+ 79813 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CASC11-NDRG1 CASC11 chr8 128742905 - NDRG1 chr8 134292474 + Exonic hg19 PRAD TCGA-XK-AAIV-01A 246 Out-of-Frame Intra-chr q24.21 q24.22 Tumor suppressor gene 79814 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CASC11-NDRG1 CASC11 chr8 128746200 - NDRG1 chr8 134292474 + Exonic hg19 PRAD TCGA-XK-AAIV-01A 246 Out-of-Frame Intra-chr q24.21 q24.22 Tumor suppressor gene 79815 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PEX14-CASZ1 PEX14 chr1 10590064 + CASZ1 chr1 10712789 + Exonic hg19 PRAD TCGA-KC-A4BV-01A 130 Out-of-Frame Intra-chr p36.22 p36.22 Transcription factor Seq+ 79816 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NDRG1-MYC NDRG1 chr8 134292474 - MYC chr8 128750493 + Exonic hg19 PRAD TCGA-XK-AAIV-01A 246 In-Frame Intra-chr q24.22 Tumor suppressor gene q24.21 Oncogene Transcription factor Seq+ 79817 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NDRG1-MYC NDRG1 chr8 134292474 - MYC chr8 128750496 + Exonic hg19 PRAD TCGA-XK-AAIV-01A 246 In-Frame Intra-chr q24.22 Tumor suppressor gene q24.21 Oncogene Transcription factor Seq+ 79818 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CHUK-HPSE2 CHUK chr10 101979188 - HPSE2 chr10 100239866 - Exonic hg19 PRAD TCGA-G9-6362-11A 130 Out-of-Frame Intra-chr q24.31 Tumor suppressor gene q24.2 79819 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FAM162A-CSTA FAM162A chr3 122103145 + CSTA chr3 122056393 + Exonic hg19 PRAD TCGA-G9-A9S4-01A 113 Out-of-Frame Intra-chr q21.1 q21.1 Seq+ 79820 ChimerSeq Tophat-Fusion TCGA_RNA-Seq YBX3-MRPL42 YBX3 chr12 10875448 - MRPL42 chr12 93894951 + Exonic hg19 PRAD TCGA-EJ-7315-01A 105 Out-of-Frame Intra-chr p13.2 Transcription factor q22 Seq+ 79821 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TCF3-JAK2 TCF3 chr19 1615718 - JAK2 chr9 5112398 + Exonic hg19 PRAD TCGA-EJ-7315-01A 114 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p24.1 TK:JakA Oncogene 79822 ChimerSeq Tophat-Fusion TCGA_RNA-Seq VGLL4-LOC101927358 VGLL4 chr3 11643306 - LOC101927358 chr9 76987087 + Exonic hg19 PRAD TCGA-HC-7748-01A 105 Out-of-Frame Inter-chr p25.2 79823 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRKCI-TMPRSS2 PRKCI chr3 169955312 + TMPRSS2 chr21 42845251 + Exonic hg19 PRAD TCGA-HC-7078-01A 362 In-Frame Inter-chr q26.2 q22.3 79824 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRKCI-TMPRSS2 PRKCI chr3 169956122 + TMPRSS2 chr21 42845251 + Exonic hg19 PRAD TCGA-HC-7078-01A 362 In-Frame Inter-chr q26.2 q22.3 79825 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRKCI-TMPRSS2 PRKCI chr3 169999364 + TMPRSS2 chr21 42843798 + Exonic hg19 PRAD TCGA-HC-7078-01A 972 In-Frame Inter-chr q26.2 q22.3 79826 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMEFF2-ACPP TMEFF2 chr2 192899419 - ACPP chr3 132075698 - Exonic hg19 PRAD TCGA-ZG-A9LZ-01A 234 In-Frame Inter-chr q32.3 Tumor suppressor gene q22.1 79827 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NCOR1-C20orf96 NCOR1 chr17 15950264 - C20orf96 chr20 259854 + Exonic hg19 PRAD TCGA-CH-5761-01A 109 Out-of-Frame Inter-chr p11.2 Oncogene p13 79828 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NCOR1-C20orf96 NCOR1 chr17 15950303 - C20orf96 chr20 259854 + Exonic hg19 PRAD TCGA-CH-5761-01A 109 Out-of-Frame Inter-chr p11.2 Oncogene p13 79829 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-KK-A59X-01A 1047 Out-of-Frame Intra-chr q21.21 q21.21 79830 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-KK-A7AQ-01A 158 Out-of-Frame Intra-chr q21.21 q21.21 79831 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-M7-A724-01A 305 Out-of-Frame Intra-chr q21.21 q21.21 79832 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT18-KCTD1 PCAT18 chr18 24283355 - KCTD1 chr18 24081213 - Exonic hg19 PRAD TCGA-HC-7080-01A 129 Out-of-Frame Intra-chr q11.2 q11.2 79833 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-GRHL2 TMPRSS2 chr21 42860320 - GRHL2 chr8 102564942 + Exonic hg19 PRAD TCGA-EJ-7314-01A 274 Out-of-Frame Inter-chr q22.3 q22.3 Transcription factor Seq+ 79834 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-GRHL2 TMPRSS2 chr21 42861433 - GRHL2 chr8 102564942 + Exonic hg19 PRAD TCGA-EJ-7314-01A 274 Out-of-Frame Inter-chr q22.3 q22.3 Transcription factor Seq+ 79835 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ADAM9-ATP6V1H ADAM9 chr8 38854678 + ATP6V1H chr8 54742443 + Exonic hg19 PRAD TCGA-EJ-5510-01A 148 In-Frame Intra-chr q11.23 79836 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ADAM9-ATP6V1H ADAM9 chr8 38862833 + ATP6V1H chr8 54742003 + Exonic hg19 PRAD TCGA-EJ-5510-01A 148 Out-of-Frame Intra-chr q11.23 79837 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FAM13C-S100P FAM13C chr10 61112029 - S100P chr4 6698619 + Exonic hg19 PRAD TCGA-EJ-8474-01A 153 In-Frame Inter-chr q21.1 p16.1 Seq+ 79838 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-SARS TMPRSS2 chr21 42860320 - SARS chr1 109766599 + Exonic hg19 PRAD TCGA-EJ-8474-01A 189 In-Frame Inter-chr q22.3 p13.3 Seq+ 79839 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-EJ-7331-01A 306 Out-of-Frame Intra-chr q21.21 q21.21 79840 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT4-ANTXR2 PCAT4 chr4 80748756 + ANTXR2 chr4 80925176 + Exonic hg19 PRAD TCGA-KK-A7AW-01A 118 Out-of-Frame Intra-chr q21.21 q21.21 79841 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LOC100652768-TAGLN LOC100652768 chr11 117070021 - TAGLN chr11 117074059 + Exonic hg19 STAD TCGA-BR-A4J9-01A 394 3'UTR-CDS Intra-chr q23.3 Tumor suppressor gene 79842 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EEF1D-ANKRD19P EEF1D chr8 144662850 - ANKRD19P chr9 95599578 - Exonic hg19 STAD TCGA-HU-A4GJ-01A 159 CDS-5'UTR Inter-chr q22.31 79843 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SPRR3-KRT13 SPRR3 chr1 152975574 - KRT13 chr17 39661634 - Exonic hg19 HNSC TCGA-CV-7103-11A 372 Out-of-Frame Inter-chr q21.3 q21.2 Seq+ 79844 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACACA-ERBB2 ACACA chr17 35472930 - ERBB2 chr17 37863393 - Exonic hg19 HNSC TCGA-CV-5432-01A 130 In-Frame Intra-chr q12 Oncogene 79845 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACACA-ERBB2 ACACA chr17 35479394 - ERBB2 chr17 37863393 - Exonic hg19 HNSC TCGA-CV-5432-01A 129 In-Frame Intra-chr q12 Oncogene 79846 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EGFR-LINC01399 EGFR chr7 55087057 + LINC01399 chr22 35615008 + Exonic hg19 HNSC TCGA-CQ-6229-01A 243 Out-of-Frame Inter-chr p11.2 TK:EGFR Oncogene q12.3 79847 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTEN-RPL11 PTEN chr10 89705654 + RPL11 chr1 24021153 + Exonic hg19 HNSC TCGA-CR-6478-01A 171 In-Frame Inter-chr q23.31 Oncogene Tumor suppressor gene p36.11 Tumor suppressor gene 79848 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 HNSC TCGA-CR-7377-01A 603 Out-of-Frame Intra-chr q11.22 79849 ChimerSeq Tophat-Fusion TCGA_RNA-Seq S100A9-KRT13 S100A9 chr1 153333272 - KRT13 chr17 39661620 - Exonic hg19 HNSC TCGA-CV-6962-11A 189 In-Frame Inter-chr q21.3 q21.2 79850 ChimerSeq Tophat-Fusion TCGA_RNA-Seq S100A9-KRT13 S100A9 chr1 153333302 - KRT13 chr17 39661561 - Exonic hg19 HNSC TCGA-CV-6962-11A 189 In-Frame Inter-chr q21.3 q21.2 79851 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-KRT13 PCBD2 chr5 134260149 + KRT13 chr17 39661627 - Exonic hg19 HNSC TCGA-CV-6962-11A 105 Out-of-Frame Inter-chr q31.1 q21.2 79852 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-KRT13 PCBD2 chr5 134262391 + KRT13 chr17 39661625 - Exonic hg19 HNSC TCGA-CV-6962-11A 105 In-Frame Inter-chr q31.1 q21.2 79853 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-KRT13 PCBD2 chr5 134263532 + KRT13 chr17 39661591 - Exonic hg19 HNSC TCGA-CV-6962-11A 105 Out-of-Frame Inter-chr q31.1 q21.2 79854 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBD2-KRT13 PCBD2 chr5 134263532 + KRT13 chr17 39661615 - Exonic hg19 HNSC TCGA-CV-6962-11A 105 Out-of-Frame Inter-chr q31.1 q21.2 79855 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 HNSC TCGA-CN-5366-01A 121 Out-of-Frame Intra-chr q11.22 79856 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677323 + IGLL5 chr22 23235959 + Exonic hg19 HNSC TCGA-CN-5366-01A 121 Out-of-Frame Intra-chr q11.22 79857 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CERS3-LRRK1 CERS3 chr15 100996097 - LRRK1 chr15 101590983 - Exonic hg19 HNSC TCGA-CV-6955-01A 183 Out-of-Frame Intra-chr q26.3 q26.3 TKL:LRRK 79858 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SPRR1A-KRT13 SPRR1A chr1 152957944 - KRT13 chr17 39661626 - Exonic hg19 HNSC TCGA-CV-6955-01A 116 Out-of-Frame Inter-chr q21.3 q21.2 79859 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SPRR1B-KRT13 SPRR1B chr1 153005059 - KRT13 chr17 39661626 - Exonic hg19 HNSC TCGA-CV-6955-01A 110 In-Frame Inter-chr q21.3 q21.2 79860 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HOTS-KRT5 HOTS chr11 2016831 + KRT5 chr12 52913750 - Exonic hg19 HNSC TCGA-CV-7255-01A 130 Out-of-Frame Inter-chr Tumor suppressor gene q13.13 79861 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MAL-KRT4 MAL chr2 95719136 - KRT4 chr12 53205700 - Exonic hg19 HNSC TCGA-CV-7177-11A 100 Out-of-Frame Inter-chr q11.1 Tumor suppressor gene q13.13 79862 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 HNSC TCGA-CR-7382-01A 334 Out-of-Frame Intra-chr q11.22 79863 ChimerSeq Tophat-Fusion TCGA_RNA-Seq S100A9-KRT13 S100A9 chr1 153333272 - KRT13 chr17 39661620 - Exonic hg19 HNSC TCGA-CV-6961-11A 168 In-Frame Inter-chr q21.3 q21.2 79864 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PARK7-LOC102724539 PARK7 chr1 8025484 + LOC102724539 chr1 8275138 + Exonic hg19 HNSC TCGA-CN-6023-01A 106 Out-of-Frame Intra-chr p36.23 Tumor suppressor gene 79865 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GSE1-EMC8 GSE1 chr16 85647003 + EMC8 chr16 85822655 - Exonic hg19 HNSC TCGA-BA-A4II-01A 113 Out-of-Frame Intra-chr q24.1 q24.1 Seq+ 79866 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KMT5B-CASC21 KMT5B chr11 67931648 - CASC21 chr8 128381720 + Exonic hg19 HNSC TCGA-BA-A4II-01A 116 Out-of-Frame Inter-chr q13.2 q24.21 79867 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANO2-DYNLRB1 ANO2 chr12 5693028 - DYNLRB1 chr20 33122541 - Exonic hg19 HNSC TCGA-CV-7099-01A 130 In-Frame Inter-chr p13.31 q11.22 79868 ChimerSeq Tophat-Fusion TCGA_RNA-Seq F11-FAT1 F11 chr4 187197536 + FAT1 chr4 187532539 + Exonic hg19 HNSC TCGA-DQ-5631-01A 652 Out-of-Frame Intra-chr q35.2 q35.2 Tumor suppressor gene 79869 ChimerSeq Tophat-Fusion TCGA_RNA-Seq F11-FAT1 F11 chr4 187202579 + FAT1 chr4 187531428 + Exonic hg19 HNSC TCGA-DQ-5631-01A 636 Out-of-Frame Intra-chr q35.2 q35.2 Tumor suppressor gene 79870 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CCAT1-CASC8 CCAT1 chr8 128231054 - CASC8 chr8 128433207 - Exonic hg19 HNSC TCGA-BA-6871-01A 239 Out-of-Frame Intra-chr q24.21 q24.21 Seq+ 79871 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 HNSC TCGA-CN-5373-01A 223 Out-of-Frame Intra-chr q11.22 79872 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PIP4K2B-LASP1 PIP4K2B chr17 36954913 - LASP1 chr17 37026510 - Exonic hg19 HNSC TCGA-CN-5373-01A 168 In-Frame Intra-chr q12 q12 79873 ChimerSeq Tophat-Fusion TCGA_RNA-Seq JUP-P3H4 JUP chr17 39920964 - P3H4 chr17 39959682 - Exonic hg19 HNSC TCGA-CN-5359-01A 669 Out-of-Frame Intra-chr q21.2 Tumor suppressor gene q21.2 79874 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GALNT11-KMT2C GALNT11 chr7 151800378 + KMT2C chr7 152055671 + Exonic hg19 HNSC TCGA-UF-A7JT-01A 116 Out-of-Frame Intra-chr q36.1 q36.1 Oncogene Tumor suppressor gene 79875 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MUC7-PCBD2 MUC7 chr4 71347400 + PCBD2 chr5 134263251 - Exonic hg19 HNSC TCGA-CV-6939-11A 180 In-Frame Inter-chr q13.3 q31.1 79876 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NAA25-SLC25A21 NAA25 chr12 112525486 - SLC25A21 chr14 37154129 - Exonic hg19 HNSC TCGA-CV-6940-01A 158 Inter-chr q24.13 q13.3 Seq+ 79877 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 HNSC TCGA-CR-7399-01A 167 Out-of-Frame Intra-chr q11.22 79878 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DGCR2-ANO1 DGCR2 chr22 19109640 - ANO1 chr11 69949171 + Exonic hg19 HNSC TCGA-CR-7399-01A 112 Out-of-Frame Inter-chr q11.21 q13.3 Seq+ 79879 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677314 + IGLL5 chr22 23235962 + Exonic hg19 THYM TCGA-XM-A8RD-01A 595 Out-of-Frame Intra-chr q11.22 79880 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAMP1-PASK RAMP1 chr2 238786003 + PASK chr2 242077981 + Exonic hg19 THYM TCGA-XH-A853-01A 157 In-Frame Intra-chr q37.3 q37.3 CAMK:CAMKL 79881 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NFIA-CDK2AP1 NFIA chr1 61872398 + CDK2AP1 chr12 123751828 - Exonic hg19 THYM TCGA-XU-A92Z-01A 137 In-Frame Inter-chr p31.3 Transcription factor q24.31 Tumor suppressor gene Seq+ 79882 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ETV6-CIDEA ETV6 chr12 11803091 + CIDEA chr18 12274089 + Exonic hg19 MESO TCGA-SC-A6LN-01A 149 Out-of-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor p11.21 Seq+ 79883 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ARHGAP1-ZNF408 ARHGAP1 chr11 46717534 - ZNF408 chr11 46724616 - Exonic hg19 KIRC TCGA-B0-5710-01A 111 Out-of-Frame Intra-chr p11.2 p11.2 Transcription factor 79884 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 KIRC TCGA-B4-5836-01A 141 Out-of-Frame Intra-chr q11.22 79885 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ATP5B-VWA3B ATP5B chr12 57032127 - VWA3B chr2 98824051 + Exonic hg19 KIRC TCGA-B0-4699-01A 203 Out-of-Frame Inter-chr q13.3 q11.2 79886 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NPSR1-NCAPD2 NPSR1 chr7 34791175 + NCAPD2 chr12 6636963 - Exonic hg19 KIRC TCGA-BP-4790-01A 125 Out-of-Frame Inter-chr p14.3 p13.31 79887 ChimerSeq Tophat-Fusion TCGA_RNA-Seq IPO7-KCNH1 IPO7 chr11 9430095 + KCNH1 chr1 211035556 - Exonic hg19 KIRC TCGA-B2-5633-01A 143 In-Frame Inter-chr p15.4 79888 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MACC1-DNAH11 MACC1 chr7 20190055 - DNAH11 chr7 21750318 - Exonic hg19 KIRC TCGA-MM-A564-01A 249 Out-of-Frame Intra-chr p21.1 p15.3 79889 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTEN-RPL11 PTEN chr10 89705653 + RPL11 chr1 24021205 + Exonic hg19 KIRC TCGA-A3-3382-01A 145 Out-of-Frame Inter-chr q23.31 Oncogene Tumor suppressor gene p36.11 Tumor suppressor gene 79890 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF216-EIF2AK1 RNF216 chr7 5756346 - EIF2AK1 chr7 6064431 - Exonic hg19 KIRC TCGA-DV-5576-01A 134 In-Frame Intra-chr p22.1 p22.1 Seq+ 79891 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ATP5B-VWA3B ATP5B chr12 57037323 - VWA3B chr2 98823204 + Exonic hg19 KIRC TCGA-DV-5576-01A 146 In-Frame Inter-chr q13.3 q11.2 79892 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983373 - RSRC2 chr12 122990252 - Exonic hg19 KIRC TCGA-B2-4102-01A 200 Out-of-Frame Intra-chr q24.31 q24.31 Seq+ 79893 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677323 + IGLL5 chr22 23235959 + Exonic hg19 KIRC TCGA-B2-4102-01A 200 Out-of-Frame Intra-chr q11.22 79894 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AMD1-FIG4 AMD1 chr6 111196417 + FIG4 chr6 110146290 + Exonic hg19 UCS TCGA-NA-A5I1-01A 331 In-Frame Intra-chr q21 q21 Seq+ 79895 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LAMA5-NTSR1 LAMA5 chr20 60893509 - NTSR1 chr20 61347961 - Exonic hg19 UCS TCGA-N8-A4PM-01A 244 Out-of-Frame Intra-chr q13.33 q13.33 79896 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SERINC3-NCOA5 SERINC3 chr20 43139929 - NCOA5 chr20 44691527 - Exonic hg19 UCS TCGA-N8-A4PN-01A 177 In-Frame Intra-chr q13.12 q13.12 Tumor suppressor gene Seq+ 79897 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TM9SF4-DEFB123 TM9SF4 chr20 30742988 + DEFB123 chr20 30037831 + Exonic hg19 UCS TCGA-N8-A4PM-01A 484 Out-of-Frame Intra-chr q11.21 q11.21 Seq+ 79898 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TOP1-CHD6 TOP1 chr20 39706276 + CHD6 chr20 40084417 + Exonic hg19 UCS TCGA-N8-A4PN-01A 126 Out-of-Frame Intra-chr q12 Oncogene q12 79899 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC25A12-RAPGEF4 SLC25A12 chr2 172700878 - RAPGEF4 chr2 173623988 - Exonic hg19 UCS TCGA-N8-A4PM-01A 134 Out-of-Frame Intra-chr q31.1 q31.1 79900 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC25A12-RAPGEF4 SLC25A12 chr2 172700878 - RAPGEF4 chr2 173624977 - Exonic hg19 UCS TCGA-N8-A4PM-01A 134 Out-of-Frame Intra-chr q31.1 q31.1 79901 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FAM212B-BCAS4 FAM212B chr1 112281807 - BCAS4 chr20 49493022 + Exonic hg19 UCS TCGA-N8-A4PN-01A 105 In-Frame Inter-chr p13.2 q13.13 Seq+ 79902 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LRP1-SLC39A5 LRP1 chr12 57522813 + SLC39A5 chr12 56630179 + Exonic hg19 UCS TCGA-NA-A5I1-01A 120 Out-of-Frame Intra-chr q13.3 q13.3 Seq+ 79903 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BRIX1-PXDNL BRIX1 chr5 34923297 + PXDNL chr8 52348665 + Exonic hg19 UCS TCGA-NA-A5I1-01A 113 Out-of-Frame Inter-chr p13.2 q11.23 79904 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 UCS TCGA-N9-A4Q1-01A 990 Out-of-Frame Intra-chr q11.22 79905 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NXF1-STX5 NXF1 chr11 62563931 - STX5 chr11 62575099 - Exonic hg19 UCS TCGA-NA-A4R1-01A 130 In-Frame Intra-chr q12.3 q12.3 Seq+ 79906 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CD44-CAPRIN1 CD44 chr11 35160916 + CAPRIN1 chr11 34110941 + Exonic hg19 UCS TCGA-NG-A4VU-01A 290 In-Frame Intra-chr p13 Oncogene Tumor suppressor gene p13 Seq+ 79907 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SUMO2-MAPK8IP2 SUMO2 chr17 73178283 - MAPK8IP2 chr22 51042479 - Exonic hg19 UCS TCGA-NA-A4R1-01A 162 In-Frame Inter-chr q25.1 q13.33 79908 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KANSL1-SPOP KANSL1 chr17 44301036 - SPOP chr17 47700237 - Exonic hg19 UCS TCGA-N8-A56S-01A 120 5'UTR-5'UTR Intra-chr q21.33 Oncogene Tumor suppressor gene Seq+ 79909 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LSM12-ITGA2B LSM12 chr17 42141168 - ITGA2B chr17 42449790 - Exonic hg19 UCS TCGA-N8-A56S-01A 227 In-Frame Intra-chr q21.31 q21.31 Seq+ 79910 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BPTF-RGS9 BPTF chr17 65850877 + RGS9 chr17 63164317 + Exonic hg19 BRCA TCGA-E9-A22D-01A 267 In-Frame Intra-chr q24.2 Transcription factor q24.1 Seq+ 79911 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BPTF-RGS9 BPTF chr17 65850877 + RGS9 chr17 63173849 + Exonic hg19 BRCA TCGA-E9-A22D-01A 259 Out-of-Frame Intra-chr q24.2 Transcription factor q24.1 Seq+ 79912 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC35B1-IGFBP4 SLC35B1 chr17 47784326 - IGFBP4 chr17 38609236 + Exonic hg19 BRCA TCGA-A2-A04W-01A 105 In-Frame Intra-chr q21.33 q21.2 Tumor suppressor gene Seq+ 79913 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NDE1-SMG1 NDE1 chr16 15797979 + SMG1 chr16 18844261 + Exonic hg19 BRCA TCGA-A2-A04Q-01A 124 In-Frame Intra-chr p13.11 p12.3 Atypical:PIKK 79914 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTPRK-AIG1 PTPRK chr6 128505576 - AIG1 chr6 143609344 - Exonic hg19 BRCA TCGA-A2-A04W-01A 155 Out-of-Frame Intra-chr Tumor suppressor gene q24.2 79915 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTPRK-STXBP6 PTPRK chr6 128505576 - STXBP6 chr14 25326362 - Exonic hg19 BRCA TCGA-A2-A04W-01A 193 In-Frame Inter-chr Tumor suppressor gene q12 Seq+ 79916 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EFCAB13-TSHZ2 EFCAB13 chr17 45445786 + TSHZ2 chr20 52103682 + Exonic hg19 BRCA TCGA-E9-A22D-01A 392 Out-of-Frame Inter-chr q21.32 q13.2 Transcription factor 79917 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RMDN1-PDXDC1 RMDN1 chr8 87495060 + PDXDC1 chr16 15138230 + Exonic hg19 BRCA TCGA-B6-A0RQ-01A 108 Out-of-Frame Inter-chr q21.3 p13.11 79918 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-A2-A04T-01A 131 Out-of-Frame Intra-chr q11.22 79919 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-E2-A15K-06A 223 Out-of-Frame Intra-chr q11.22 79920 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SYNE2-KIAA0391 SYNE2 chr14 64453334 + KIAA0391 chr14 35735932 + Exonic hg19 BRCA TCGA-A8-A079-01A 370 In-Frame Intra-chr q23.2 q13.2 Seq+ 79921 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MACROD1-PITPNM1 MACROD1 chr11 63918710 - PITPNM1 chr11 67267891 - Exonic hg19 BRCA TCGA-AC-A4ZE-01A 208 In-Frame Intra-chr q13.1 q13.2 Seq+ 79922 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MACROD1-PITPNM1 MACROD1 chr11 63918710 - PITPNM1 chr11 67269556 - Exonic hg19 BRCA TCGA-AC-A4ZE-01A 208 In-Frame Intra-chr q13.1 q13.2 Seq+ 79923 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983373 - RSRC2 chr12 122990252 - Exonic hg19 BRCA TCGA-EW-A1P1-01A 224 Out-of-Frame Intra-chr q24.31 q24.31 Seq+ 79924 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT18-KCTD1 PCAT18 chr18 24283355 - KCTD1 chr18 24081213 - Exonic hg19 BRCA TCGA-A8-A08C-01A 114 Out-of-Frame Intra-chr q11.2 q11.2 79925 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERBB2-THRA ERBB2 chr17 37880176 + THRA chr17 38233860 - Exonic hg19 BRCA TCGA-GM-A2DA-01A 235 Out-of-Frame Intra-chr q12 Oncogene q21.1 Tumor suppressor gene Transcription factor 79926 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTSB-DOCK5 CTSB chr8 11705575 - DOCK5 chr8 25108759 - Exonic hg19 BRCA TCGA-E2-A15K-06A 611 In-Frame Intra-chr p23.1 p21.2 79927 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTSB-DOCK5 CTSB chr8 11705575 - DOCK5 chr8 25108903 - Exonic hg19 BRCA TCGA-E2-A15K-06A 611 In-Frame Intra-chr p23.1 p21.2 79928 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LRP5-MOGAT2 LRP5 chr11 68193654 + MOGAT2 chr11 75431036 + Exonic hg19 BRCA TCGA-A1-A0SQ-01A 117 In-Frame Intra-chr q13.2 q13.5 Seq+ 79929 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WWP1-CNBD1 WWP1 chr8 87393857 + CNBD1 chr8 88249600 - Exonic hg19 BRCA TCGA-A8-A079-01A 178 Out-of-Frame Intra-chr q21.3 q21.3 79930 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CDH11-PRC1 CDH11 chr16 65005481 - PRC1 chr15 91512852 - Exonic hg19 BRCA TCGA-A2-A4S1-01A 259 Out-of-Frame Inter-chr q21 Oncogene Tumor suppressor gene q26.1 Seq+ 79931 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MYH9-FOXRED2 MYH9 chr22 36737414 - FOXRED2 chr22 36889849 - Exonic hg19 BRCA TCGA-A8-A09Q-01A 179 In-Frame Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Seq+ 79932 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-A2-A25A-01A 102 Out-of-Frame Intra-chr q11.22 79933 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-C8-A138-01A 3175 Out-of-Frame Intra-chr q11.22 79934 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677324 + IGLL5 chr22 23235963 + Exonic hg19 BRCA TCGA-BH-A1ET-11B 150 Out-of-Frame Intra-chr q11.22 79935 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMEM117-SCAF11 TMEM117 chr12 44260207 + SCAF11 chr12 46339031 + Exonic hg19 BRCA TCGA-C8-A12W-01A 117 Out-of-Frame Intra-chr q12 q12 79936 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NDUFS4-IL6ST NDUFS4 chr5 52973642 + IL6ST chr5 55243320 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 109 Out-of-Frame Intra-chr q11.2 q11.2 Oncogene 79937 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NDUFS4-IL6ST NDUFS4 chr5 52974362 + IL6ST chr5 55243320 + Exonic hg19 BRCA TCGA-A8-A09Q-01A 109 Out-of-Frame Intra-chr q11.2 q11.2 Oncogene 79938 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SEPT9-MRPL38 2009_ 9_ 1_ chr17 75303281 + MRPL38 chr17 73895654 - Exonic hg19 BRCA TCGA-C8-A12V-01A 112 Out-of-Frame Intra-chr q25.1 Seq+ 79939 ChimerSeq Tophat-Fusion TCGA_RNA-Seq C10orf11-RAB3IP C10orf11 chr10 77760986 + RAB3IP chr12 70195500 - Exonic hg19 BRCA TCGA-E2-A10C-01A 171 Out-of-Frame Inter-chr q15 79940 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MITF-PTDSS1 MITF chr3 69900940 + PTDSS1 chr8 97274446 - Exonic hg19 BRCA TCGA-EW-A1PC-01B 580 Out-of-Frame Inter-chr p13 Oncogene Transcription factor q22.1 79941 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-OL-A6VO-01A 122 Out-of-Frame Intra-chr q11.22 79942 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PSMD11-CEP112 PSMD11 chr17 30774063 + CEP112 chr17 64179424 - Exonic hg19 BRCA TCGA-A8-A08J-01A 118 CDS-5'UTR Intra-chr q11.2 q24.1 Seq+ 79943 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ASIC2-CEP112 ASIC2 chr17 31749746 - CEP112 chr17 64125863 + Exonic hg19 BRCA TCGA-A8-A08J-01A 112 Out-of-Frame Intra-chr q12 q24.1 79944 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCF11-KDM2A PCF11 chr11 82868672 + KDM2A chr11 66974980 + Exonic hg19 BRCA TCGA-BH-A201-01A 112 Out-of-Frame Intra-chr q14.1 q13.2 Transcription factor Seq+ 79945 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPIF-REEP3 PPIF chr10 81107498 + REEP3 chr10 65354537 + Exonic hg19 BRCA TCGA-AN-A0AJ-01A 295 In-Frame Intra-chr q22.3 q21.3 Seq+ 79946 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LACE1-ZUFSP LACE1 chr6 108645251 + ZUFSP chr6 116957041 - Exonic hg19 BRCA TCGA-AN-A0AJ-01A 152 In-Frame Intra-chr q22.1 Transcription factor Seq+ 79947 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GYS1-EML2 GYS1 chr19 49485511 - EML2 chr19 46116928 - Exonic hg19 BRCA TCGA-BH-A1F6-01A 382 Out-of-Frame Intra-chr q13.33 q13.32 Seq+ 79948 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PIP4K2B-MED24 PIP4K2B chr17 36933939 - MED24 chr17 38188342 - Exonic hg19 BRCA TCGA-A7-A4SF-01A 213 In-Frame Intra-chr q12 q21.1 Seq+ 79949 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BPTF-PITPNC1 BPTF chr17 65936771 + PITPNC1 chr17 65665623 + Exonic hg19 BRCA TCGA-BH-A1F6-01A 163 In-Frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 79950 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 BRCA TCGA-A2-A0YL-01A 112 Out-of-Frame Intra-chr q11.22 79951 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-E2-A3DX-01A 315 Out-of-Frame Intra-chr q11.22 79952 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ESR1-ASPH ESR1 chr6 152201905 + ASPH chr8 62416067 - Exonic hg19 BRCA TCGA-A2-A3KD-01A 614 Out-of-Frame Inter-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q12.3 Seq+ 79953 ChimerSeq Tophat-Fusion TCGA_RNA-Seq STON2-LOC100506700 STON2 chr14 81790360 - LOC100506700 chr14 81908785 - Exonic hg19 BRCA TCGA-E2-A1LL-01A 656 Out-of-Frame Intra-chr q31.1 79954 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NEMF-SLC35F4 NEMF chr14 50302450 - SLC35F4 chr14 58091141 + Exonic hg19 BRCA TCGA-E2-A10A-01A 129 Out-of-Frame Intra-chr q21.3 q23.1 79955 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ATP8A2-IRS2 ATP8A2 chr13 26297827 + IRS2 chr13 110434978 + Exonic hg19 BRCA TCGA-BH-A1FL-01A 462 Out-of-Frame Intra-chr q12.13 q34 Oncogene 79956 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SS18L1-CDH4 SS18L1 chr20 60718944 + CDH4 chr20 60469965 + Exonic hg19 BRCA TCGA-E2-A1LL-01A 147 In-Frame Intra-chr q13.33 q13.33 Tumor suppressor gene Seq+ 79957 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MCM6-DARS MCM6 chr2 136622582 - DARS chr2 136664976 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 113 In-Frame Intra-chr q21.3 q21.3 Seq+ 79958 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WNK1-PIP4K2C WNK1 chr12 966414 + PIP4K2C chr12 57995308 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 102 Out-of-Frame Intra-chr p13.33 q13.3 Seq+ 79959 ChimerSeq Tophat-Fusion TCGA_RNA-Seq IL12RB2-DAB1 IL12RB2 chr1 67845805 + DAB1 chr1 57611101 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 172 In-Frame Intra-chr p31.3 p32.1 Seq+ 79960 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TRIO-MARCH11 TRIO chr5 14488368 + 2011_ 3_ 1_ chr5 16091189 - Exonic hg19 BRCA TCGA-AN-A0AM-01A 199 In-Frame Intra-chr p15.2 Seq+ 79961 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MSRB2-HPS4 MSRB2 chr10 23385776 + HPS4 chr22 26849239 + Exonic hg19 BRCA TCGA-BH-A0B7-01A 143 Out-of-Frame Inter-chr p12.2 q12.1 79962 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 BRCA TCGA-S3-A6ZG-01A 327 Out-of-Frame Intra-chr q11.22 79963 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ECI1-NKAIN4 ECI1 chr16 2293046 - NKAIN4 chr20 61882098 + Exonic hg19 BRCA TCGA-BH-A0H9-01A 215 Out-of-Frame Inter-chr p13.3 q13.33 79964 ChimerSeq Tophat-Fusion TCGA_RNA-Seq STAU1-TSHZ2 STAU1 chr20 47733283 - TSHZ2 chr20 51611354 - Exonic hg19 BRCA TCGA-BH-A0H9-01A 177 Out-of-Frame Intra-chr q13.13 q13.2 Transcription factor 79965 ChimerSeq Tophat-Fusion TCGA_RNA-Seq STAU1-TSHZ2 STAU1 chr20 47733662 - TSHZ2 chr20 51609110 - Exonic hg19 BRCA TCGA-BH-A0H9-01A 177 Out-of-Frame Intra-chr q13.13 q13.2 Transcription factor 79966 ChimerSeq Tophat-Fusion TCGA_RNA-Seq STAU1-TSHZ2 STAU1 chr20 47733662 - TSHZ2 chr20 51610559 - Exonic hg19 BRCA TCGA-BH-A0H9-01A 177 Out-of-Frame Intra-chr q13.13 q13.2 Transcription factor 79967 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ARL15-NSD1 ARL15 chr5 53372650 - NSD1 chr5 176639195 - Exonic hg19 BRCA TCGA-D8-A1XT-01A 105 Out-of-Frame Intra-chr q11.2 q35.3 Oncogene 79968 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CISD2-THBS1 CISD2 chr4 103790343 + THBS1 chr15 39886433 - Exonic hg19 BRCA TCGA-A2-A0EM-01A 209 In-Frame Inter-chr q24 q14 Oncogene Tumor suppressor gene 79969 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CISD2-THBS1 CISD2 chr4 103791023 + THBS1 chr15 39886832 - Exonic hg19 BRCA TCGA-A2-A0EM-01A 209 Out-of-Frame Inter-chr q24 q14 Oncogene Tumor suppressor gene 79970 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MED13L-PRIM1 MED13L chr12 116675272 - PRIM1 chr12 57133146 - Exonic hg19 BRCA TCGA-AR-A1AV-01A 720 In-Frame Intra-chr q24.21 q13.3 Seq+ 79971 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTTN-ANO1 CTTN chr11 70256065 + ANO1 chr11 69933857 + Exonic hg19 BRCA TCGA-A8-A07O-01A 175 In-Frame Intra-chr q13.3 q13.3 Seq+ 79972 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ASAP2-ADAM17 ASAP2 chr2 9430293 + ADAM17 chr2 9661331 + Exonic hg19 BRCA TCGA-A8-A07O-01A 109 Out-of-Frame Intra-chr p25.1 p25.1 79973 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MYO9A-TMEM59 MYO9A chr15 72208710 - TMEM59 chr1 54509197 - Exonic hg19 BRCA TCGA-A8-A07O-01A 117 In-Frame Inter-chr q23 p32.3 Seq+ 79974 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-E2-A159-01A 694 Out-of-Frame Intra-chr q11.22 79975 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PBX1-RGS7 PBX1 chr1 164761974 + RGS7 chr1 241322919 + Exonic hg19 BRCA TCGA-A8-A07O-01A 113 Out-of-Frame Intra-chr q23.3 Oncogene Transcription factor q43 79976 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PBX1-RGS7 PBX1 chr1 164761974 + RGS7 chr1 241323682 + Exonic hg19 BRCA TCGA-A8-A07O-01A 113 Out-of-Frame Intra-chr q23.3 Oncogene Transcription factor q43 79977 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SCUBE2-ZNF143 SCUBE2 chr11 9080849 - ZNF143 chr11 9537882 - Exonic hg19 BRCA TCGA-A7-A426-01A 189 Out-of-Frame Intra-chr p15.4 Tumor suppressor gene p15.4 Transcription factor 79978 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SCUBE2-ZNF143 SCUBE2 chr11 9080849 - ZNF143 chr11 9537885 - Exonic hg19 BRCA TCGA-A7-A426-01A 189 Out-of-Frame Intra-chr p15.4 Tumor suppressor gene p15.4 Transcription factor 79979 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DLG2-UNC45B DLG2 chr11 85195025 - UNC45B chr17 33478331 - Exonic hg19 BRCA TCGA-A7-A13G-01B 100 Out-of-Frame Inter-chr q14.1 q12 79980 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF670-PRIM1 ZNF670 chr1 247206462 + PRIM1 chr12 57140739 - Exonic hg19 BRCA TCGA-A8-A07O-01A 100 Out-of-Frame Inter-chr q44 Transcription factor q13.3 79981 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTEN-RPL11 PTEN chr10 89705654 + RPL11 chr1 24021153 + Exonic hg19 BRCA TCGA-A8-A07O-01A 177 In-Frame Inter-chr q23.31 Oncogene Tumor suppressor gene p36.11 Tumor suppressor gene 79982 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-3C-AALI-01A 420 Out-of-Frame Intra-chr q11.22 79983 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LINC00589-CHST8 LINC00589 chr8 29590522 - CHST8 chr19 34113201 - Exonic hg19 BRCA TCGA-S3-AA12-01A 439 3'UTR-5'UTR Inter-chr p12 q13.11 79984 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LINC00589-CHST8 LINC00589 chr8 29590699 - CHST8 chr19 34113201 - Exonic hg19 BRCA TCGA-S3-AA12-01A 439 3'UTR-5'UTR Inter-chr p12 q13.11 79985 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TBL1XR1-LINC00578 TBL1XR1 chr3 176816253 - LINC00578 chr3 177454946 - Exonic hg19 BRCA TCGA-C8-A12P-01A 208 5'UTR-5'UTR Intra-chr q26.32 q26.32 Seq+ 79986 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CABLES1-FTO CABLES1 chr18 20716570 + FTO chr16 54145673 + Exonic hg19 BRCA TCGA-S3-AA12-01A 207 In-Frame Inter-chr q11.2 Tumor suppressor gene q12.2 Seq+ 79987 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SCMH1-PPT1 SCMH1 chr1 41536266 - PPT1 chr1 40539854 - Exonic hg19 BRCA TCGA-E9-A1R7-01A 114 Out-of-Frame Intra-chr p34.2 Transcription factor p34.2 Seq+ 79988 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DDX5-RSAD1 DDX5 chr17 62496112 - RSAD1 chr17 48556583 + Exonic hg19 BRCA TCGA-3C-AALI-01A 219 Out-of-Frame Intra-chr q23.3 q21.33 Seq+ 79989 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD23A-CALR RAD23A chr19 13063666 + CALR chr19 13054350 + Exonic hg19 BRCA TCGA-A1-A0SO-01A 234 In-Frame Intra-chr p13.13 p13.13 Seq+ 79990 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LOC101927318-AQP5 LOC101927318 chr12 50356075 - AQP5 chr12 50357299 + Exonic hg19 BRCA TCGA-A1-A0SO-01A 301 Out-of-Frame Intra-chr q13.12 79991 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANXA2-RNF114 ANXA2 chr15 60643391 - RNF114 chr20 48565784 + Exonic hg19 BRCA TCGA-C8-A12P-01A 1462 In-Frame Inter-chr q22.2 q13.13 Seq+ 79992 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FARSA-NFIX FARSA chr19 13043962 - NFIX chr19 13186484 - Exonic hg19 BRCA TCGA-AN-A0G0-01A 205 Out-of-Frame Intra-chr p13.13 p13.13 Transcription factor 79993 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KCNQ3-NDRG1 KCNQ3 chr8 133310284 - NDRG1 chr8 134266781 + Exonic hg19 BRCA TCGA-AC-A7VB-01A 197 Out-of-Frame Intra-chr q24.22 q24.22 Tumor suppressor gene Seq+ 79994 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KCNQ3-NDRG1 KCNQ3 chr8 133310371 - NDRG1 chr8 134266781 + Exonic hg19 BRCA TCGA-AC-A7VB-01A 197 Out-of-Frame Intra-chr q24.22 q24.22 Tumor suppressor gene Seq+ 79995 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACER3-NARS2 ACER3 chr11 76572122 + NARS2 chr11 78177058 - Exonic hg19 BRCA TCGA-AN-A0G0-01A 230 Intra-chr q13.5 q14.1 Seq+ 79996 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACER3-NARS2 ACER3 chr11 76572122 + NARS2 chr11 78180358 - Exonic hg19 BRCA TCGA-AN-A0G0-01A 230 Intra-chr q13.5 q14.1 Seq+ 79997 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TVP23A-CIITA TVP23A chr16 10867130 - CIITA chr16 10997751 - Exonic hg19 BRCA TCGA-EW-A1PB-01A 204 Out-of-Frame Intra-chr p13.13 p13.13 79998 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TVP23A-CIITA TVP23A chr16 10886578 - CIITA chr16 10996657 - Exonic hg19 BRCA TCGA-EW-A1PB-01A 634 Out-of-Frame Intra-chr p13.13 p13.13 79999 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TVP23A-CIITA TVP23A chr16 10892862 - CIITA chr16 10996657 - Exonic hg19 BRCA TCGA-EW-A1PB-01A 634 Out-of-Frame Intra-chr p13.13 p13.13 80000 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ETV6-YTHDF2 ETV6 chr12 11992237 + YTHDF2 chr1 29095440 + Exonic hg19 BRCA TCGA-EW-A1PB-01A 539 Out-of-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor p35.3 Seq+ 80001 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIT-EXOC1 KIT chr4 55561819 + EXOC1 chr4 56744231 - Exonic hg19 BRCA TCGA-E2-A1B0-01A 325 Out-of-Frame Intra-chr q12 TK:PDGFR Oncogene q12 80002 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIT-EXOC1 KIT chr4 55565123 + EXOC1 chr4 56745120 - Exonic hg19 BRCA TCGA-E2-A1B0-01A 325 In-Frame Intra-chr q12 TK:PDGFR Oncogene q12 80003 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RARA-MYO1D RARA chr17 38487647 + MYO1D chr17 31107801 - Exonic hg19 BRCA TCGA-A8-A09I-01A 121 Out-of-Frame Intra-chr q21.2 Oncogene Transcription factor q11.2 Seq+ 80004 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HEATR6-MIEN1 HEATR6 chr17 58147562 - MIEN1 chr17 37886515 - Exonic hg19 BRCA TCGA-A8-A09I-01A 534 Out-of-Frame Intra-chr q23.1 q12 Seq+ 80005 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NSD1-LINC01476 NSD1 chr5 176666865 + LINC01476 chr17 57508280 - Exonic hg19 BRCA TCGA-E2-A1B0-01A 215 Out-of-Frame Inter-chr q35.3 Oncogene q23.1 80006 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NSD1-LINC01476 NSD1 chr5 176666865 + LINC01476 chr17 57511881 - Exonic hg19 BRCA TCGA-E2-A1B0-01A 215 Out-of-Frame Inter-chr q35.3 Oncogene q23.1 80007 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSC2-NPW TSC2 chr16 2100486 + NPW chr16 2070126 + Exonic hg19 BRCA TCGA-BH-A0B1-01A 103 Out-of-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 80008 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSC2-NPW TSC2 chr16 2100486 + NPW chr16 2070190 + Exonic hg19 BRCA TCGA-BH-A0B1-01A 103 Out-of-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 80009 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DLG2-UNC45B DLG2 chr11 85195025 - UNC45B chr17 33478331 - Exonic hg19 BRCA TCGA-AC-A3OD-01B 162 Out-of-Frame Inter-chr q14.1 q12 80010 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DLG2-UNC45B DLG2 chr11 85195044 - UNC45B chr17 33478298 - Exonic hg19 BRCA TCGA-AC-A3OD-01B 162 In-Frame Inter-chr q14.1 q12 80011 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTPRK-THEMIS PTPRK chr6 128505576 - THEMIS chr6 128031160 - Exonic hg19 BRCA TCGA-AN-A0FW-01A 271 In-Frame Intra-chr Tumor suppressor gene Seq+ 80012 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-A2-A0T4-01A 110 Out-of-Frame Intra-chr q11.22 80013 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TANC2-RGS9 TANC2 chr17 61457186 + RGS9 chr17 63223518 - Exonic hg19 BRCA TCGA-AN-A0FW-01A 117 Out-of-Frame Intra-chr q23.2 q24.1 80014 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WBP11-MGP WBP11 chr12 14946664 - MGP chr12 15037178 - Exonic hg19 BRCA TCGA-A2-A0D0-01A 409 In-Frame Intra-chr p12.3 p12.3 Seq+ 80015 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GNE-ERP27 GNE chr9 36276890 - ERP27 chr12 15073981 - Exonic hg19 BRCA TCGA-A2-A25F-01A 324 In-Frame Inter-chr p13.3 p12.3 Seq+ 80016 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OR51B5-TMEM258 OR51B5 chr11 5383840 - TMEM258 chr11 61557997 + Exonic hg19 BRCA TCGA-BH-A0H6-01A 179 Out-of-Frame Intra-chr p15.4 q12.2 80017 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SRPK2-NKAIN3 SRPK2 chr7 104782531 + NKAIN3 chr8 63777281 + Exonic hg19 BRCA TCGA-A7-A26H-01A 100 Out-of-Frame Inter-chr q22.3 CMGC:SRPK q12.3 80018 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MTG1-ZNF511 MTG1 chr10 135216276 + ZNF511 chr10 135126291 + Exonic hg19 BRCA TCGA-C8-A137-01A 167 In-Frame Intra-chr q26.3 q26.3 Transcription factor Seq+ 80019 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RMDN1-ESRP1 RMDN1 chr8 87519223 - ESRP1 chr8 95674728 + Exonic hg19 BRCA TCGA-AR-A0TY-01A 240 Out-of-Frame Intra-chr q21.3 q22.1 Tumor suppressor gene Seq+ 80020 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF232-RABEP1 ZNF232 chr17 5014868 - RABEP1 chr17 5284799 - Exonic hg19 BRCA TCGA-LL-A6FQ-01A 156 Out-of-Frame Intra-chr p13.2 Transcription factor p13.2 80021 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMEM135-AAMDC TMEM135 chr11 86802436 + AAMDC chr11 77553524 + Exonic hg19 BRCA TCGA-AN-A0FV-01A 185 Out-of-Frame Intra-chr q14.2 q14.1 Seq+ 80022 ChimerSeq Tophat-Fusion TCGA_RNA-Seq URGCP-CCDC129 URGCP chr7 43927013 - CCDC129 chr7 31681789 + Exonic hg19 BRCA TCGA-AN-A0FV-01A 139 In-Frame Intra-chr p13 p14.3 Seq+ 80023 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-AR-A24Q-01A 5428 Out-of-Frame Intra-chr q11.22 80024 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677323 + IGLL5 chr22 23235959 + Exonic hg19 BRCA TCGA-PE-A5DD-01A 203 Out-of-Frame Intra-chr q11.22 80025 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LAPTM4A-SDC1 LAPTM4A chr2 20251170 - SDC1 chr2 20405184 - Exonic hg19 BRCA TCGA-AC-A6IW-01A 184 In-Frame Intra-chr p24.1 p24.1 Seq+ 80026 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HSPG2-LOC102724312 HSPG2 chr1 22202017 - LOC102724312 chr1 1368147 - Exonic hg19 BRCA TCGA-AR-A24Q-01A 126 Out-of-Frame Intra-chr p36.12 80027 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HSPG2-LOC102724312 HSPG2 chr1 22202121 - LOC102724312 chr1 1366333 - Exonic hg19 BRCA TCGA-AR-A24Q-01A 126 Out-of-Frame Intra-chr p36.12 80028 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTBP1-FGFR3 CTBP1 chr4 1225500 - FGFR3 chr4 1803203 - Exonic hg19 BRCA TCGA-D8-A1JG-01B 615 Out-of-Frame Intra-chr p16.3 p16.3 TK:FGFR Oncogene 80029 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTBP1-FGFR3 CTBP1 chr4 1225866 - FGFR3 chr4 1801538 - Exonic hg19 BRCA TCGA-D8-A1JG-01B 615 Out-of-Frame Intra-chr p16.3 p16.3 TK:FGFR Oncogene 80030 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTBP1-FGFR3 CTBP1 chr4 1231970 - FGFR3 chr4 1802494 - Exonic hg19 BRCA TCGA-D8-A1JG-01B 615 Out-of-Frame Intra-chr p16.3 p16.3 TK:FGFR Oncogene 80031 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA1644-CELSR1 KIAA1644 chr22 44667911 - CELSR1 chr22 46831577 + Exonic hg19 BRCA TCGA-AR-A0U2-01A 146 In-Frame Intra-chr q13.31 q13.31 80032 ChimerSeq Tophat-Fusion TCGA_RNA-Seq C2orf54-LINC01512 C2orf54 chr2 241829421 - LINC01512 chr6 43899912 - Exonic hg19 BRCA TCGA-D8-A1JG-01B 135 Out-of-Frame Inter-chr q37.3 80033 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CARTPT-PIP CARTPT chr5 71015706 - PIP chr7 142829221 + Exonic hg19 BRCA TCGA-D8-A1XV-01A 262 In-Frame Inter-chr q13.2 q34 80034 ChimerSeq Tophat-Fusion TCGA_RNA-Seq THBS1-FSIP1 THBS1 chr15 39886255 - FSIP1 chr15 39910445 - Exonic hg19 BRCA TCGA-AR-A24H-01A 157 Out-of-Frame Intra-chr q14 Oncogene Tumor suppressor gene q14 80035 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SCARB2-SHROOM3 SCARB2 chr4 77091019 - SHROOM3 chr4 77679744 - Exonic hg19 BRCA TCGA-D8-A1JG-01B 145 Out-of-Frame Intra-chr q21.1 q21.1 80036 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DNAJC1-LOC100507377 DNAJC1 chr10 22193450 - LOC100507377 chr12 74668732 + Exonic hg19 BRCA TCGA-AR-A5QN-01A 160 CDS-3'UTR Inter-chr p12.31 80037 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-AR-A1AO-01A 203 Out-of-Frame Intra-chr q11.22 80038 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LRRC59-NUP107 LRRC59 chr17 48469758 - NUP107 chr12 69135592 + Exonic hg19 BRCA TCGA-A8-A0A7-01A 1319 In-Frame Inter-chr q21.33 q15 Seq+ 80039 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NAP1L1-LOC643339 NAP1L1 chr12 76461149 - LOC643339 chr12 93475363 + Exonic hg19 BRCA TCGA-A8-A0A7-01A 1628 Intra-chr q21.2 80040 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NAP1L1-LOC643339 NAP1L1 chr12 76461150 - LOC643339 chr12 93485115 + Exonic hg19 BRCA TCGA-A8-A0A7-01A 1674 Intra-chr q21.2 80041 ChimerSeq Tophat-Fusion TCGA_RNA-Seq USP22-MYH10 USP22 chr17 20919064 - MYH10 chr17 8508299 - Exonic hg19 BRCA TCGA-A8-A093-01A 106 Out-of-Frame Intra-chr p11.2 p13.1 Seq+ 80042 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EPC1-PTGR2 EPC1 chr10 32635690 - PTGR2 chr14 74340725 + Exonic hg19 BRCA TCGA-BH-A0C7-01B 160 In-Frame Inter-chr p11.22 q24.3 Seq+ 80043 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MSL1-LINC01499 MSL1 chr17 38289361 + LINC01499 chr11 41756221 + Exonic hg19 BRCA TCGA-BH-A0DD-01A 390 Out-of-Frame Inter-chr q21.1 p12 80044 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RSF1-TP53TG3HP RSF1 chr11 77451775 - TP53TG3HP chr16 34739784 - Exonic hg19 BRCA TCGA-A2-A1FX-01A 154 Out-of-Frame Inter-chr q14.1 p11.1 80045 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CD9-ADAMTS12 CD9 chr12 6334699 + ADAMTS12 chr5 33729891 - Exonic hg19 BRCA TCGA-A7-A4SD-01A 216 Out-of-Frame Inter-chr p13.31 p13.2 Seq+ 80046 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPFIA1-CBL PPFIA1 chr11 70192689 + CBL chr11 119103405 - Exonic hg19 BRCA TCGA-A2-A1FX-01A 113 Out-of-Frame Intra-chr q13.3 q23.3 Oncogene Tumor suppressor gene 80047 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPFIA1-CBL PPFIA1 chr11 70194525 + CBL chr11 119102792 - Exonic hg19 BRCA TCGA-A2-A1FX-01A 113 Out-of-Frame Intra-chr q13.3 q23.3 Oncogene Tumor suppressor gene 80048 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPFIA1-CBL PPFIA1 chr11 70196144 + CBL chr11 119102792 - Exonic hg19 BRCA TCGA-A2-A1FX-01A 113 In-Frame Intra-chr q13.3 q23.3 Oncogene Tumor suppressor gene 80049 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AAMDC-TENM4 AAMDC chr11 77594997 + TENM4 chr11 78600829 + Exonic hg19 BRCA TCGA-BH-A0HY-01A 364 Out-of-Frame Intra-chr q14.1 q14.1 KB 80050 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZMYND8-GTPBP1 ZMYND8 chr20 45848908 - GTPBP1 chr22 39111911 + Exonic hg19 BRCA TCGA-EW-A1PF-01A 118 In-Frame Inter-chr q13.12 q13.1 Seq+ 80051 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PIK3R3-RAD54L PIK3R3 chr1 46546313 - RAD54L chr1 46733348 - Exonic hg19 BRCA TCGA-C8-A135-01A 134 Out-of-Frame Intra-chr p34.1 p34.1 80052 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCBP2-SLC9A6 PCBP2 chr12 53865590 + SLC9A6 chrX 135113365 - Exonic hg19 BRCA TCGA-BH-A0DX-01A 292 Out-of-Frame Inter-chr q13.13 q26.3 80053 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ABCC8-CAPRIN1 ABCC8 chr11 17439844 - CAPRIN1 chr11 34113602 - Exonic hg19 BRCA TCGA-A8-A07R-01A 163 Out-of-Frame Intra-chr p15.1 p13 80054 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERC1-YY1 ERC1 chr12 1219395 + YY1 chr14 100728802 - Exonic hg19 BRCA TCGA-BH-A0HY-01A 160 Out-of-Frame Inter-chr q32.2 Transcription factor 80055 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ATL2-HNRNPLL ATL2 chr2 38604284 - HNRNPLL chr2 38800568 - Exonic hg19 BRCA TCGA-A8-A07R-01A 416 Out-of-Frame Intra-chr p22.1 p22.1 Seq+ 80056 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DNAJC1-LOC100507377 DNAJC1 chr10 22193450 - LOC100507377 chr12 74668732 + Exonic hg19 BRCA TCGA-LL-A442-01A 279 CDS-3'UTR Inter-chr p12.31 80057 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR11-TACC2 WDR11 chr10 122615694 + TACC2 chr10 123880237 - Exonic hg19 BRCA TCGA-BH-A18J-01A 196 In-Frame Intra-chr q26.12 Tumor suppressor gene q26.13 80058 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-BH-A0BA-01A 4323 Out-of-Frame Intra-chr q11.22 80059 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 BRCA TCGA-BH-A18V-06A 163 Out-of-Frame Intra-chr q11.22 80060 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BCAR3-CDC34 BCAR3 chr1 94075327 - CDC34 chr19 537146 - Exonic hg19 BRCA TCGA-A7-A5ZV-01A 141 Out-of-Frame Inter-chr p22.1 p13.3 80061 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MVP-KIF22 MVP chr16 29851779 + KIF22 chr16 29814769 + Exonic hg19 BRCA TCGA-BH-A18V-06A 206 In-Frame Intra-chr p11.2 p11.2 Seq+ 80062 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTSB-DOCK5 CTSB chr8 11705575 - DOCK5 chr8 25108759 - Exonic hg19 BRCA TCGA-E2-A15K-01A 401 In-Frame Intra-chr p23.1 p21.2 80063 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTSB-DOCK5 CTSB chr8 11705575 - DOCK5 chr8 25108903 - Exonic hg19 BRCA TCGA-E2-A15K-01A 401 In-Frame Intra-chr p23.1 p21.2 80064 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMEM45A-CMSS1 TMEM45A chr3 100211771 + CMSS1 chr3 99879273 + Exonic hg19 BRCA TCGA-A7-A5ZV-01A 124 Out-of-Frame Intra-chr q12.2 q12.1 Seq+ 80065 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMEM45A-CMSS1 TMEM45A chr3 100238451 + CMSS1 chr3 99879273 + Exonic hg19 BRCA TCGA-A7-A5ZV-01A 100 Out-of-Frame Intra-chr q12.2 q12.1 Seq+ 80066 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TRIT1-CHI3L2 TRIT1 chr1 40348989 - CHI3L2 chr1 111772473 + Exonic hg19 BRCA TCGA-XX-A89A-01A 117 Out-of-Frame Intra-chr p34.2 Tumor suppressor gene p13.2 Seq+ 80067 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MYSM1-ALG14 MYSM1 chr1 59165654 - ALG14 chr1 95449186 - Exonic hg19 BRCA TCGA-A7-A5ZV-01A 134 Out-of-Frame Intra-chr p32.1 Transcription factor p21.3 Seq+ 80068 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MYSM1-ALG14 MYSM1 chr1 59165656 - ALG14 chr1 95448861 - Exonic hg19 BRCA TCGA-A7-A5ZV-01A 134 Out-of-Frame Intra-chr p32.1 Transcription factor p21.3 Seq+ 80069 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OLFM2-TBC1D21 OLFM2 chr19 10046979 - TBC1D21 chr15 74173984 + Exonic hg19 BRCA TCGA-AN-A0AR-01A 107 In-Frame Inter-chr p13.2 q24.1 Seq+ 80070 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 BRCA TCGA-A2-A3KC-01A 110 Out-of-Frame Intra-chr q11.22 80071 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTNNA1-SIL1 CTNNA1 chr5 138119060 + SIL1 chr5 138384714 + Exonic hg19 BRCA TCGA-EW-A1P8-01A 147 Out-of-Frame Intra-chr q31.2 Oncogene q31.2 80072 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTNNA1-SIL1 CTNNA1 chr5 138119060 + SIL1 chr5 138386690 + Exonic hg19 BRCA TCGA-EW-A1P8-01A 147 In-Frame Intra-chr q31.2 Oncogene q31.2 80073 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ARFGEF1-LINC01111 ARFGEF1 chr8 68137137 - LINC01111 chr8 77431034 + Exonic hg19 BRCA TCGA-C8-A12U-01A 138 Out-of-Frame Intra-chr q13.2 q21.13 80074 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CLCN7-TCEB2 CLCN7 chr16 1500511 + TCEB2 chr16 2827127 - Exonic hg19 BRCA TCGA-EW-A1IZ-01A 102 In-Frame Intra-chr p13.3 80075 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CLCN7-TCEB2 CLCN7 chr16 1500598 + TCEB2 chr16 2827127 - Exonic hg19 BRCA TCGA-EW-A1IZ-01A 102 In-Frame Intra-chr p13.3 80076 ChimerSeq Tophat-Fusion TCGA_RNA-Seq C11orf49-ASNA1 C11orf49 chr11 47063161 + ASNA1 chr19 12856311 - Exonic hg19 BRCA TCGA-E9-A5UP-01A 148 In-Frame Inter-chr p11.2 p13.13 80077 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TRIM24-SVOPL TRIM24 chr7 138255747 + SVOPL chr7 138281274 - Exonic hg19 BRCA TCGA-C8-A1HM-01A 136 In-Frame Intra-chr q33 Oncogene Tumor suppressor gene q34 Seq+ 80078 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TRIM24-SVOPL TRIM24 chr7 138258386 + SVOPL chr7 138281274 - Exonic hg19 BRCA TCGA-C8-A1HM-01A 136 Out-of-Frame Intra-chr q33 Oncogene Tumor suppressor gene q34 Seq+ 80079 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WHSC1L1-ADAM32 WHSC1L1 chr8 38138984 - ADAM32 chr8 39131830 + Exonic hg19 BRCA TCGA-EW-A1PH-01A 109 Out-of-Frame Intra-chr p11.23 Tumor suppressor gene Seq+ 80080 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FARSB-ACSL3 FARSB chr2 223512699 - ACSL3 chr2 223789312 - Exonic hg19 BRCA TCGA-BH-A0RX-01A 144 Out-of-Frame Intra-chr q36.1 q36.1 80081 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FARSB-ACSL3 FARSB chr2 223515004 - ACSL3 chr2 223789312 - Exonic hg19 BRCA TCGA-BH-A0RX-01A 142 Out-of-Frame Intra-chr q36.1 q36.1 80082 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SSR1-CAGE1 SSR1 chr6 7301542 - CAGE1 chr6 7330120 - Exonic hg19 BRCA TCGA-A2-A0CX-01A 2299 Out-of-Frame Intra-chr p24.3 p24.3 Seq+ 80083 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OPHN1-EDA OPHN1 chrX 67652708 - EDA chrX 68923667 - Exonic hg19 BRCA TCGA-A2-A04P-01A 133 In-Frame Intra-chr q12 q13.1 80084 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SMIM13-NOL7 SMIM13 chr6 11105862 + NOL7 chr6 13618032 - Exonic hg19 BRCA TCGA-A2-A0CX-01A 262 Out-of-Frame Intra-chr p24.2 p23 Tumor suppressor gene 80085 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EIF2AK2-CEBPZ EIF2AK2 chr2 37349648 - CEBPZ chr2 37429045 - Exonic hg19 BRCA TCGA-A2-A04P-01A 140 Out-of-Frame Intra-chr p22.2 p22.2 Transcription factor Seq+ 80086 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSC2-KCTD5 TSC2 chr16 2112120 + KCTD5 chr16 2732706 - Exonic hg19 BRCA TCGA-A7-A425-01A 139 Out-of-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 80087 ChimerSeq Tophat-Fusion TCGA_RNA-Seq STARD13-LAMA5 STARD13 chr13 33712616 - LAMA5 chr20 60902287 + Exonic hg19 BRCA TCGA-AR-A0TX-01A 548 In-Frame Inter-chr q13.1 Tumor suppressor gene q13.33 80088 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LINC01237-LOC728323 LINC01237 chr2 242853047 + LOC728323 chr2 243037037 + Exonic hg19 BRCA TCGA-BH-A18P-01A 244 Out-of-Frame Intra-chr q37.3 80089 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677323 + IGLL5 chr22 23235959 + Exonic hg19 BRCA TCGA-A2-A0CL-01A 1885 Out-of-Frame Intra-chr q11.22 80090 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SNX13-STAP2 SNX13 chr7 17979906 - STAP2 chr19 4333812 - Exonic hg19 BRCA TCGA-B6-A0I9-01A 143 In-Frame Inter-chr p21.1 p13.3 Seq+ 80091 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SNX13-STAP2 SNX13 chr7 17979906 - STAP2 chr19 4334040 - Exonic hg19 BRCA TCGA-B6-A0I9-01A 143 In-Frame Inter-chr p21.1 p13.3 Seq+ 80092 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CLSTN2-PCOLCE2 CLSTN2 chr3 140285051 + PCOLCE2 chr3 142539886 - Exonic hg19 BRCA TCGA-A2-A0CL-01A 193 Out-of-Frame Intra-chr q23 q23 Seq+ 80093 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPO-ANKS1B TMPO chr12 98925615 + ANKS1B chr12 99425225 + Exonic hg19 BRCA TCGA-A2-A0CM-01A 118 Out-of-Frame Intra-chr q23.1 q23.1 80094 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ORMDL3-ZPBP2 ORMDL3 chr17 38080282 - ZPBP2 chr17 38026946 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 253 Out-of-Frame Intra-chr q21.1 q21.1 Seq+ 80095 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ORMDL3-ZPBP2 ORMDL3 chr17 38080282 - ZPBP2 chr17 38027716 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 253 Out-of-Frame Intra-chr q21.1 q21.1 Seq+ 80096 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ORMDL3-ZPBP2 ORMDL3 chr17 38080282 - ZPBP2 chr17 38029296 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 253 Out-of-Frame Intra-chr q21.1 q21.1 Seq+ 80097 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RCN1-VWA8 RCN1 chr11 32123801 + VWA8 chr13 42481721 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 136 Out-of-Frame Inter-chr p13 q14.11 80098 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ASTN2-PNMT ASTN2 chr9 120053604 - PNMT chr17 37825881 + Exonic hg19 BRCA TCGA-B6-A0I9-01A 127 Out-of-Frame Inter-chr q33.1 q12 Seq+ 80099 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NCOA6-ZNF831 NCOA6 chr20 33342524 - ZNF831 chr20 57792784 - Exonic hg19 BRCA TCGA-B6-A0I9-01A 100 In-Frame Intra-chr q11.22 q13.32 Transcription factor 80100 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RARA-ZNF718 RARA chr17 38487647 + ZNF718 chr4 59322 + Exonic hg19 BRCA TCGA-AR-A0TX-01A 357 Out-of-Frame Inter-chr q21.2 Oncogene Transcription factor p16.3 Transcription factor 80101 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ATP1B1-SLC30A9 ATP1B1 chr1 169099315 + SLC30A9 chr4 42031782 + Exonic hg19 BRCA TCGA-AR-A0TX-01A 106 Out-of-Frame Inter-chr q24.2 p13 80102 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-AO-A03L-01A 2101 Out-of-Frame Intra-chr q11.22 80103 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-E2-A15C-01A 203 Out-of-Frame Intra-chr q11.22 80104 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CSMD3-PLEC CSMD3 chr8 113408699 - PLEC chr8 145049344 + Exonic hg19 BRCA TCGA-AC-A5XU-01A 553 Out-of-Frame Intra-chr q23.3 Oncogene q24.3 80105 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CREBBP-NUBP1 CREBBP chr16 3819174 - NUBP1 chr16 10846466 + Exonic hg19 BRCA TCGA-B6-A0IA-01A 210 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.13 Seq+ 80106 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPFIA1-RHOD PPFIA1 chr11 70118541 + RHOD chr11 66833366 + Exonic hg19 BRCA TCGA-EW-A1J3-01A 556 In-Frame Intra-chr q13.3 q13.2 Seq+ 80107 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EAF2-RGS9 EAF2 chr3 121554237 + RGS9 chr17 63221119 + Exonic hg19 BRCA TCGA-AO-A03L-01A 273 Out-of-Frame Inter-chr q13.33 Tumor suppressor gene q24.1 Seq+ 80108 ChimerSeq Tophat-Fusion TCGA_RNA-Seq VTCN1-NUP88 VTCN1 chr1 117695712 - NUP88 chr17 5292279 - Exonic hg19 BRCA TCGA-E9-A244-01A 300 Out-of-Frame Inter-chr p12 p13.2 Seq+ 80109 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RARA-PSMD3 RARA chr17 38487647 + PSMD3 chr17 38151206 + Exonic hg19 BRCA TCGA-EW-A1J3-01A 173 Out-of-Frame Intra-chr q21.2 Oncogene Transcription factor q21.1 Seq+ 80110 ChimerSeq Tophat-Fusion TCGA_RNA-Seq POP1-TRPS1 POP1 chr8 99135706 + TRPS1 chr8 116426301 + Exonic hg19 BRCA TCGA-AC-A5XU-01A 165 Out-of-Frame Intra-chr q22.2 q23.3 Transcription factor 80111 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CALN1-TBL2 CALN1 chr7 71418127 - TBL2 chr7 72988267 + Exonic hg19 BRCA TCGA-OK-A5Q2-01A 108 In-Frame Intra-chr q11.22 q11.23 Tumor suppressor gene 80112 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CALN1-TBL2 CALN1 chr7 71422116 - TBL2 chr7 72988290 + Exonic hg19 BRCA TCGA-OK-A5Q2-01A 108 In-Frame Intra-chr q11.22 q11.23 Tumor suppressor gene 80113 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DLG2-UNC45B DLG2 chr11 85195025 - UNC45B chr17 33478331 - Exonic hg19 BRCA TCGA-AC-A3QQ-01B 279 Out-of-Frame Inter-chr q14.1 q12 80114 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR12-ASB7 WDR12 chr2 203747458 + ASB7 chr15 101185681 + Exonic hg19 BRCA TCGA-E9-A244-01A 123 Out-of-Frame Inter-chr q33.2 q26.3 80115 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-D8-A1JC-01A 103 Out-of-Frame Intra-chr q11.22 80116 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-D8-A27L-01A 139 Out-of-Frame Intra-chr q11.22 80117 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KDM2A-RPS6KB2 KDM2A chr11 66888828 + RPS6KB2 chr11 67200810 + Exonic hg19 BRCA TCGA-AR-A1AY-01A 182 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 80118 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MBD2-DOCK2 MBD2 chr18 51714083 - DOCK2 chr5 169502950 + Exonic hg19 BRCA TCGA-AR-A1AY-01A 141 Out-of-Frame Inter-chr q21.2 Transcription factor q35.1 Seq+ 80119 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MBD2-DOCK2 MBD2 chr18 51715243 - DOCK2 chr5 169502950 + Exonic hg19 BRCA TCGA-AR-A1AY-01A 141 In-Frame Inter-chr q21.2 Transcription factor q35.1 Seq+ 80120 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ECE1-PTPRF ECE1 chr1 21631384 - PTPRF chr1 44019611 - Exonic hg19 BRCA TCGA-OL-A5RZ-01A 626 In-Frame Intra-chr p36.12 p34.2 80121 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NTM-OPCML NTM chr11 131781538 + OPCML chr11 132527216 - Exonic hg19 BRCA TCGA-BH-A1ES-06A 106 Out-of-Frame Intra-chr q25 q25 Tumor suppressor gene Seq+ 80122 ChimerSeq Tophat-Fusion TCGA_RNA-Seq INADL-SMG6 INADL chr1 62451503 + SMG6 chr17 2206926 + Exonic hg19 BRCA TCGA-OL-A5RZ-01A 325 Out-of-Frame Inter-chr p13.3 80123 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MAP2K3-PLXDC1 MAP2K3 chr17 21188280 + PLXDC1 chr17 37263669 + Exonic hg19 BRCA TCGA-OL-A5RZ-01A 107 In-Frame Intra-chr p11.2 STE:STE7 q12 80124 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MAP2K3-PLXDC1 MAP2K3 chr17 21188280 + PLXDC1 chr17 37267247 + Exonic hg19 BRCA TCGA-OL-A5RZ-01A 100 Out-of-Frame Intra-chr p11.2 STE:STE7 q12 80125 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MED1-ABCC3 MED1 chr17 37604050 - ABCC3 chr17 48733192 + Exonic hg19 BRCA TCGA-BH-A0AW-01A 517 In-Frame Intra-chr q12 Tumor suppressor gene q21.33 Seq+ 80126 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-BH-A209-11A 203 Out-of-Frame Intra-chr q11.22 80127 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC12A8-BFSP2 SLC12A8 chr3 124930142 - BFSP2 chr3 133169146 + Exonic hg19 BRCA TCGA-D8-A1XR-01A 108 In-Frame Intra-chr q21.2 q22.1 Seq+ 80128 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPS6KB1-VMP1 RPS6KB1 chr17 57970685 + VMP1 chr17 57915655 + Exonic hg19 BRCA TCGA-JL-A3YW-01A 495 Out-of-Frame Intra-chr q23.1 Oncogene q23.1 KB Pub Seq+ 80129 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPFIA1-PAPD5 PPFIA1 chr11 70147270 + PAPD5 chr16 50186942 - Exonic hg19 BRCA TCGA-EW-A1J5-01A 214 In-Frame Inter-chr q13.3 q12.1 80130 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPFIA1-PAPD5 PPFIA1 chr11 70147270 + PAPD5 chr16 50188169 - Exonic hg19 BRCA TCGA-EW-A1J5-01A 214 In-Frame Inter-chr q13.3 q12.1 80131 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ICA1-PDZD9 ICA1 chr7 8183595 + PDZD9 chr16 22010436 - Exonic hg19 BRCA TCGA-D8-A1XR-01A 110 In-Frame Inter-chr p21.3 80132 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LTV1-ATG5 LTV1 chr6 144167360 + ATG5 chr6 106649963 - Exonic hg19 BRCA TCGA-E9-A248-01A 208 In-Frame Intra-chr q24.2 q21 Seq+ 80133 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SUPT5H-SIPA1L3 SUPT5H chr19 39936604 + SIPA1L3 chr19 38643479 + Exonic hg19 BRCA TCGA-E9-A1RF-01A 183 Out-of-Frame Intra-chr q13.2 q13.13 Seq+ 80134 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677305 + IGLL5 chr22 23235962 + Exonic hg19 BRCA TCGA-E9-A248-01A 2294 Out-of-Frame Intra-chr q11.22 80135 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 BRCA TCGA-E2-A1IH-01A 277 Out-of-Frame Intra-chr q11.22 80136 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FBXL20-MSL1 FBXL20 chr17 37453379 - MSL1 chr17 38290531 + Exonic hg19 BRCA TCGA-A2-A1G1-01A 193 In-Frame Intra-chr q12 q21.1 Seq+ 80137 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PREX1-NFATC2 PREX1 chr20 47361561 - NFATC2 chr20 50114725 + Exonic hg19 BRCA TCGA-AO-A03P-01A 338 Out-of-Frame Intra-chr q13.13 q13.2 Tumor suppressor gene Transcription factor 80138 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PREX1-NFATC2 PREX1 chr20 47361561 - NFATC2 chr20 50114730 + Exonic hg19 BRCA TCGA-AO-A03P-01A 338 In-Frame Intra-chr q13.13 q13.2 Tumor suppressor gene Transcription factor 80139 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SYNRG-MSL1 SYNRG chr17 35902599 + MSL1 chr17 38290531 + Exonic hg19 BRCA TCGA-A2-A1G1-01A 172 Out-of-Frame Intra-chr q21.1 80140 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SYNRG-MSL1 SYNRG chr17 35906802 + MSL1 chr17 38290531 + Exonic hg19 BRCA TCGA-A2-A1G1-01A 173 Out-of-Frame Intra-chr q21.1 80141 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SYNRG-MSL1 SYNRG chr17 35910993 + MSL1 chr17 38290070 + Exonic hg19 BRCA TCGA-A2-A1G1-01A 173 Out-of-Frame Intra-chr q21.1 80142 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPRD1B-STK4 RPRD1B chr20 36668965 + STK4 chr20 43671079 - Exonic hg19 BRCA TCGA-AO-A03P-01A 193 In-Frame Intra-chr q11.23 q13.12 80143 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SYNRG-FBXL20 SYNRG chr17 35901327 - FBXL20 chr17 37453379 + Exonic hg19 BRCA TCGA-A2-A1G1-01A 442 Out-of-Frame Intra-chr q12 80144 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SYNRG-FBXL20 SYNRG chr17 35906686 - FBXL20 chr17 37453379 + Exonic hg19 BRCA TCGA-A2-A1G1-01A 270 Out-of-Frame Intra-chr q12 80145 ChimerSeq Tophat-Fusion TCGA_RNA-Seq THSD4-ALDH1A2 THSD4 chr15 71704161 + ALDH1A2 chr15 58306478 - Exonic hg19 BRCA TCGA-AO-A03P-01A 115 In-Frame Intra-chr q23 q21.3 Tumor suppressor gene Seq+ 80146 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PHF2-NR6A1 PHF2 chr9 96398776 + NR6A1 chr9 127311217 + Exonic hg19 BRCA TCGA-A8-A06Z-01A 111 Out-of-Frame Intra-chr q22.31 q33.3 Transcription factor 80147 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPP6R3-LOC338694 PPP6R3 chr11 68370959 + LOC338694 chr11 68926913 + Exonic hg19 BRCA TCGA-A8-A06Z-01A 167 Out-of-Frame Intra-chr q13.2 80148 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RORA-IGF1R RORA chr15 60829058 - IGF1R chr15 99473533 - Exonic hg19 BRCA TCGA-AO-A03P-01A 220 Out-of-Frame Intra-chr q22.2 Transcription factor q26.3 TK:InsR Oncogene 80149 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RORA-IGF1R RORA chr15 60836572 - IGF1R chr15 99473533 - Exonic hg19 BRCA TCGA-AO-A03P-01A 242 In-Frame Intra-chr q22.2 Transcription factor q26.3 TK:InsR Oncogene 80150 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RORA-IGF1R RORA chr15 60837003 - IGF1R chr15 99473533 - Exonic hg19 BRCA TCGA-AO-A03P-01A 242 In-Frame Intra-chr q22.2 Transcription factor q26.3 TK:InsR Oncogene 80151 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RORA-IGF1R RORA chr15 60838463 - IGF1R chr15 99473533 - Exonic hg19 BRCA TCGA-AO-A03P-01A 249 Out-of-Frame Intra-chr q22.2 Transcription factor q26.3 TK:InsR Oncogene 80152 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RORA-IGF1R RORA chr15 60839916 - IGF1R chr15 99473533 - Exonic hg19 BRCA TCGA-AO-A03P-01A 246 In-Frame Intra-chr q22.2 Transcription factor q26.3 TK:InsR Oncogene 80153 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RORA-IGF1R RORA chr15 60847894 - IGF1R chr15 99473533 - Exonic hg19 BRCA TCGA-AO-A03P-01A 117 In-Frame Intra-chr q22.2 Transcription factor q26.3 TK:InsR Oncogene 80154 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ARID1B-PLEKHG1 ARID1B chr6 157256709 + PLEKHG1 chr6 151089773 + Exonic hg19 BRCA TCGA-E9-A248-01A 136 In-Frame Intra-chr q25.3 Oncogene q25.1 Seq+ 80155 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ICE2-GDPGP1 ICE2 chr15 60741733 - GDPGP1 chr15 90777827 - Exonic hg19 BRCA TCGA-AO-A03P-01A 122 Out-of-Frame Intra-chr q22.2 q26.1 80156 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MSL1-YWHAEP7 MSL1 chr17 38289361 + YWHAEP7 chr17 36214847 - Exonic hg19 BRCA TCGA-A2-A1G1-01A 496 Out-of-Frame Intra-chr q21.1 q12 80157 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CASC15-RIT2 CASC15 chr6 22020770 + RIT2 chr18 40323684 - Exonic hg19 BRCA TCGA-AC-A23C-01A 665 Out-of-Frame Inter-chr p22.3 q12.3 Seq+ 80158 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZCCHC8-RSRC2 ZCCHC8 chr12 122983373 - RSRC2 chr12 122990252 - Exonic hg19 BRCA TCGA-A8-A09M-01A 225 Out-of-Frame Intra-chr q24.31 q24.31 Seq+ 80159 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-A7-A6VY-01A 426 Out-of-Frame Intra-chr q11.22 80160 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PIEZO1-APRT PIEZO1 chr16 88792255 - APRT chr16 88876333 - Exonic hg19 BRCA TCGA-A8-A09M-01A 244 Out-of-Frame Intra-chr q24.3 q24.3 Seq+ 80161 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PIEZO1-APRT PIEZO1 chr16 88792691 - APRT chr16 88876247 - Exonic hg19 BRCA TCGA-A8-A09M-01A 244 Out-of-Frame Intra-chr q24.3 q24.3 Seq+ 80162 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTTN-INPPL1 CTTN chr11 70279906 + INPPL1 chr11 71943774 + Exonic hg19 BRCA TCGA-PE-A5DC-01A 166 In-Frame Intra-chr q13.3 q13.4 Seq+ 80163 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PSMB7-NPAS3 PSMB7 chr9 127174630 - NPAS3 chr14 33603100 - Exonic hg19 BRCA TCGA-BH-A1FM-01A 954 Out-of-Frame Inter-chr q33.3 q13.1 Transcription factor 80164 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PSMB7-NPAS3 PSMB7 chr9 127174630 - NPAS3 chr14 33619769 - Exonic hg19 BRCA TCGA-BH-A1FM-01A 266 Out-of-Frame Inter-chr q33.3 q13.1 Transcription factor 80165 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PSMB7-NPAS3 PSMB7 chr9 127174630 - NPAS3 chr14 33622689 - Exonic hg19 BRCA TCGA-BH-A1FM-01A 264 In-Frame Inter-chr q33.3 q13.1 Transcription factor 80166 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MED1-CAP2 MED1 chr17 37595417 - CAP2 chr6 17528712 + Exonic hg19 BRCA TCGA-AC-A23C-01A 1449 Out-of-Frame Inter-chr q12 Tumor suppressor gene p22.3 Seq+ 80167 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MED1-CAP2 MED1 chr17 37595417 - CAP2 chr6 17528717 + Exonic hg19 BRCA TCGA-AC-A23C-01A 1449 In-Frame Inter-chr q12 Tumor suppressor gene p22.3 Seq+ 80168 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MTMR4-MYO1D MTMR4 chr17 56581104 - MYO1D chr17 30860835 - Exonic hg19 BRCA TCGA-EW-A1J1-01A 130 Out-of-Frame Intra-chr q22 q11.2 80169 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MTMR4-MYO1D MTMR4 chr17 56581104 - MYO1D chr17 30864100 - Exonic hg19 BRCA TCGA-EW-A1J1-01A 130 In-Frame Intra-chr q22 q11.2 80170 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HCG25-TREML1 HCG25 chr6 33219482 + TREML1 chr6 41122082 - Exonic hg19 BRCA TCGA-AC-A23C-01A 204 5'UTR-5'UTR Intra-chr p21.1 80171 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677324 + IGLL5 chr22 23235963 + Exonic hg19 BRCA TCGA-BH-A0DT-11A 146 Out-of-Frame Intra-chr q11.22 80172 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PXDNL-ITFG1 PXDNL chr8 52688000 - ITFG1 chr16 47252778 + Exonic hg19 BRCA TCGA-E9-A1RE-01A 118 Out-of-Frame Inter-chr q11.23 q12.1 80173 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PXDNL-ITFG1 PXDNL chr8 52701915 - ITFG1 chr16 47252778 + Exonic hg19 BRCA TCGA-E9-A1RE-01A 415 In-Frame Inter-chr q11.23 q12.1 80174 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AK5-URB2 AK5 chr1 78022371 + URB2 chr1 229763505 - Exonic hg19 BRCA TCGA-AR-A24Z-01A 388 Out-of-Frame Intra-chr p31.1 q42.13 80175 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GALNT2-PGBD5 GALNT2 chr1 230372470 + PGBD5 chr1 230478849 + Exonic hg19 BRCA TCGA-E2-A1II-01A 197 Out-of-Frame Intra-chr q42.13 q42.13 Seq+ 80176 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GALNT2-PGBD5 GALNT2 chr1 230372470 + PGBD5 chr1 230486775 + Exonic hg19 BRCA TCGA-E2-A1II-01A 204 Out-of-Frame Intra-chr q42.13 q42.13 Seq+ 80177 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCYT2-ANAPC11 PCYT2 chr17 79864339 - ANAPC11 chr17 79857795 + Exonic hg19 BRCA TCGA-A2-A0T1-01A 122 Out-of-Frame Intra-chr q25.3 q25.3 Seq+ 80178 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCYT2-ANAPC11 PCYT2 chr17 79865429 - ANAPC11 chr17 79857795 + Exonic hg19 BRCA TCGA-A2-A0T1-01A 122 Out-of-Frame Intra-chr q25.3 q25.3 Seq+ 80179 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MTAP-C9orf3 MTAP chr9 21838008 + C9orf3 chr9 97726707 - Exonic hg19 BRCA TCGA-AR-A24Z-01A 103 In-Frame Intra-chr p21.3 Tumor suppressor gene q22.32 80180 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SACS-SDK2 SACS chr13 23932472 - SDK2 chr17 71565061 - Exonic hg19 BRCA TCGA-E2-A14T-01A 275 Out-of-Frame Inter-chr q12.12 q25.1 80181 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23739997 - APOO chrX 23899068 - Exonic hg19 BRCA TCGA-A7-A13D-01A 307 In-Frame Intra-chr p22.11 p22.11 Seq+ 80182 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-AC-A8OQ-01A 147 Out-of-Frame Intra-chr q11.22 80183 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-AR-A5QM-01A 404 Out-of-Frame Intra-chr q11.22 80184 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MDH1-COMMD1 MDH1 chr2 63821719 + COMMD1 chr2 62227835 + Exonic hg19 BRCA TCGA-A2-A04U-01A 127 In-Frame Intra-chr p15 p15 Seq+ 80185 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LAMA5-RBBP8NL LAMA5 chr20 60905271 - RBBP8NL chr20 60993532 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 144 Out-of-Frame Intra-chr q13.33 q13.33 Seq+ 80186 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ARID1A-YTHDF2 ARID1A chr1 27059282 + YTHDF2 chr1 29064169 + Exonic hg19 BRCA TCGA-E2-A14T-01A 184 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p35.3 Seq+ 80187 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COL23A1-SQSTM1 COL23A1 chr5 177780038 - SQSTM1 chr5 179251275 - Exonic hg19 BRCA TCGA-A2-A04U-01A 496 In-Frame Intra-chr q35.3 q35.3 80188 ChimerSeq Tophat-Fusion TCGA_RNA-Seq YWHAZ-GRHL2 YWHAZ chr8 101958974 - GRHL2 chr8 102588437 - Exonic hg19 BRCA TCGA-AC-A8OQ-01A 142 Out-of-Frame Intra-chr q22.3 q22.3 Transcription factor 80189 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TTC39A-CRISP1 TTC39A chr1 51760062 - CRISP1 chr6 49819841 - Exonic hg19 BRCA TCGA-BH-A209-01A 363 In-Frame Inter-chr p32.3 p12.3 Seq+ 80190 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA1324-TBX15 KIAA1324 chr1 109743521 + TBX15 chr1 119445322 + Exonic hg19 BRCA TCGA-BH-A209-01A 100 In-Frame Intra-chr p13.3 p12 Transcription factor 80191 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CD59-FBXO3 CD59 chr11 33731751 - FBXO3 chr11 33780146 - Exonic hg19 BRCA TCGA-A7-A13D-01A 126 Out-of-Frame Intra-chr p13 p13 Seq+ 80192 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BRCA1-NMT1 BRCA1 chr17 41244949 - NMT1 chr17 43175869 - Exonic hg19 BRCA TCGA-A2-A04U-01A 145 In-Frame Intra-chr q21.31 Oncogene Tumor suppressor gene q21.31 80193 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MEX3D-DCTN6 MEX3D chr19 1567462 - DCTN6 chr8 30032600 + Exonic hg19 BRCA TCGA-EW-A1P4-01A 112 In-Frame Inter-chr p13.3 p12 Seq+ 80194 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SMIM7-MYO9B SMIM7 chr19 16757906 - MYO9B chr19 17263571 - Exonic hg19 BRCA TCGA-A2-A04U-01A 388 Out-of-Frame Intra-chr p13.11 p13.11 80195 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SMIM7-MYO9B SMIM7 chr19 16757930 - MYO9B chr19 17263571 - Exonic hg19 BRCA TCGA-A2-A04U-01A 388 Out-of-Frame Intra-chr p13.11 p13.11 80196 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ELL-SMIM7 ELL chr19 18632730 - SMIM7 chr19 16758071 - Exonic hg19 BRCA TCGA-A2-A04U-01A 117 Out-of-Frame Intra-chr p13.11 p13.11 Seq+ 80197 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ELL-SMIM7 ELL chr19 18632730 - SMIM7 chr19 16764935 - Exonic hg19 BRCA TCGA-A2-A04U-01A 124 Out-of-Frame Intra-chr p13.11 p13.11 Seq+ 80198 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TBL1XR1-USP13 TBL1XR1 chr3 176763916 - USP13 chr3 179478899 + Exonic hg19 BRCA TCGA-A8-A07G-01A 454 In-Frame Intra-chr q26.32 q26.33 Seq+ 80199 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 BRCA TCGA-BH-A0BQ-01A 137 Out-of-Frame Intra-chr q11.22 80200 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677322 + IGLL5 chr22 23235958 + Exonic hg19 BRCA TCGA-B6-A0IQ-01A 849 Out-of-Frame Intra-chr q11.22 80201 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPRD1A-ELP2 RPRD1A chr18 33643682 - ELP2 chr18 33713278 - Exonic hg19 BRCA TCGA-A8-A07G-01A 122 In-Frame Intra-chr q12.2 q12.2 80202 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MED1-ODF3L2 MED1 chr17 37604050 - ODF3L2 chr19 464363 - Exonic hg19 BRCA TCGA-LL-A5YN-01A 115 Out-of-Frame Inter-chr q12 Tumor suppressor gene p13.3 Seq+ 80203 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MED1-ODF3L2 MED1 chr17 37604050 - ODF3L2 chr19 467545 - Exonic hg19 BRCA TCGA-LL-A5YN-01A 115 Out-of-Frame Inter-chr q12 Tumor suppressor gene p13.3 Seq+ 80204 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPS19-DMRTC2 RPS19 chr19 42365280 + DMRTC2 chr19 42354593 + Exonic hg19 BRCA TCGA-A8-A07G-01A 213 Out-of-Frame Intra-chr q13.2 q13.2 Transcription factor Seq+ 80205 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SEC61A2-MAPK14 SEC61A2 chr10 12209809 + MAPK14 chr6 36059929 + Exonic hg19 BRCA TCGA-B6-A0IQ-01A 253 In-Frame Inter-chr p14 p21.31 80206 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ATP1B1-SLC30A9 ATP1B1 chr1 169099316 + SLC30A9 chr4 42031783 + Exonic hg19 BRCA TCGA-A8-A07G-01A 143 In-Frame Inter-chr q24.2 p13 80207 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CLNS1A-AQP11 CLNS1A chr11 77336007 - AQP11 chr11 77314600 + Exonic hg19 BRCA TCGA-D8-A27G-01A 155 In-Frame Intra-chr q14.1 q14.1 Seq+ 80208 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WHSC1L1-ZMAT4 WHSC1L1 chr8 38172164 - ZMAT4 chr8 40389756 - Exonic hg19 BRCA TCGA-EW-A1IX-01A 215 Out-of-Frame Intra-chr p11.23 Tumor suppressor gene p11.21 Transcription factor Seq+ 80209 ChimerSeq Tophat-Fusion TCGA_RNA-Seq YBX3-DGKE YBX3 chr12 10865931 + DGKE chr17 54920378 + Exonic hg19 BRCA TCGA-EW-A6SC-01A 115 Out-of-Frame Inter-chr p13.2 Transcription factor q22 80210 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERBB2-STXBP4 ERBB2 chr17 37881654 + STXBP4 chr17 53065831 - Exonic hg19 BRCA TCGA-BH-A0DZ-11A 218 In-Frame Intra-chr q12 Oncogene q22 80211 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERBB2-STXBP4 ERBB2 chr17 37881847 + STXBP4 chr17 53065852 - Exonic hg19 BRCA TCGA-BH-A0DZ-11A 218 Out-of-Frame Intra-chr q12 Oncogene q22 80212 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SSFA2-SMARCE1 SSFA2 chr2 182774697 + SMARCE1 chr17 38788462 + Exonic hg19 BRCA TCGA-B6-A0IO-01A 178 In-Frame Inter-chr q31.3 q21.2 80213 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DNAJB12-SLC25A16 DNAJB12 chr10 74114522 - SLC25A16 chr10 70266474 - Exonic hg19 BRCA TCGA-AO-A03V-01A 101 In-Frame Intra-chr q22.1 q21.3 Seq+ 80214 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DCAF13-CASC21 DCAF13 chr8 104427743 + CASC21 chr8 128302304 - Exonic hg19 BRCA TCGA-A2-A04Y-01A 271 Out-of-Frame Intra-chr q22.3 q24.21 80215 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DCAF13-CASC21 DCAF13 chr8 104433309 + CASC21 chr8 128302304 - Exonic hg19 BRCA TCGA-A2-A04Y-01A 273 Out-of-Frame Intra-chr q22.3 q24.21 80216 ChimerSeq Tophat-Fusion TCGA_RNA-Seq USP32-TBC1D16 USP32 chr17 58378959 - TBC1D16 chr17 77939518 + Exonic hg19 BRCA TCGA-EW-A1OX-01A 104 In-Frame Intra-chr q23.2 q25.3 80217 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PIP4K2B-SHANK2 PIP4K2B chr17 36933939 - SHANK2 chr11 70742671 - Exonic hg19 BRCA TCGA-AC-A2FB-01A 100 In-Frame Inter-chr q12 q13.4 Seq+ 80218 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SMC5-IMMP2L SMC5 chr9 72882890 + IMMP2L chr7 110603620 - Exonic hg19 BRCA TCGA-AO-A124-01A 367 In-Frame Inter-chr q21.12 q31.1 Seq+ 80219 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TAF2-DSCC1 TAF2 chr8 120814033 - DSCC1 chr8 120859319 - Exonic hg19 BRCA TCGA-AO-A124-01A 327 In-Frame Intra-chr q24.12 q24.12 Seq+ 80220 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NPTN-CLUAP1 NPTN chr15 73879864 - CLUAP1 chr16 3580567 + Exonic hg19 BRCA TCGA-BH-A0AV-01A 494 In-Frame Inter-chr q24.1 p13.3 Seq+ 80221 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-AR-A2LO-01A 138 Out-of-Frame Intra-chr q11.22 80222 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-S3-AA0Z-01A 161 Out-of-Frame Intra-chr q11.22 80223 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MYO5B-ELAC1 MYO5B chr18 47455881 - ELAC1 chr18 48500880 - Exonic hg19 BRCA TCGA-AO-A124-01A 227 Out-of-Frame Intra-chr q21.1 q21.2 80224 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPP2R4-FAM73B PPP2R4 chr9 131902623 + FAM73B chr9 131830766 + Exonic hg19 BRCA TCGA-OL-A5D6-01A 114 Out-of-Frame Intra-chr Tumor suppressor gene Seq+ 80225 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SNAI1-SLC9A8 SNAI1 chr20 48599677 + SLC9A8 chr20 48479465 + Exonic hg19 BRCA TCGA-OL-A5D6-01A 129 Out-of-Frame Intra-chr q13.13 Transcription factor q13.13 Seq+ 80226 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLF1-ZMYM2 SLF1 chr5 93977098 + ZMYM2 chr13 20641529 - Exonic hg19 BRCA TCGA-AC-A3OD-01A 115 Out-of-Frame Inter-chr q15 q12.11 80227 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NOMO3-TFAP4 NOMO3 chr16 16350014 + TFAP4 chr16 4312701 - Exonic hg19 BRCA TCGA-S3-AA0Z-01A 154 In-Frame Intra-chr p13.11 p13.3 Transcription factor Seq+ 80228 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SEC61A2-MAPK14 SEC61A2 chr10 12209809 + MAPK14 chr6 36059929 + Exonic hg19 BRCA TCGA-AO-A124-01A 122 In-Frame Inter-chr p14 p21.31 80229 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 BRCA TCGA-E2-A1B6-01A 2209 Out-of-Frame Intra-chr q11.22 80230 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 BRCA TCGA-AC-A3HN-01A 229 Out-of-Frame Intra-chr q11.22 80231 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 BRCA TCGA-AO-A0J5-01A 153 Out-of-Frame Intra-chr q11.22 80232 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WFDC2-PI3 WFDC2 chr20 44099171 + PI3 chr20 43804501 + Exonic hg19 BRCA TCGA-AQ-A54N-01A 294 In-Frame Intra-chr q13.12 q13.12 Seq+ 80233 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TFG-ADGRG7 TFG chr3 100438901 + ADGRG7 chr3 100348441 + Exonic hg19 BRCA TCGA-D8-A1XB-01A 106 Out-of-Frame Intra-chr q12.2 q12.2 KB Pub 80234 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NFIB-HEATR5B NFIB chr9 14313480 - HEATR5B chr2 37208936 - Exonic hg19 BRCA TCGA-A1-A0SB-01A 244 Out-of-Frame Inter-chr p22.3 Transcription factor p22.2 Seq+ 80235 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-A1-A0SD-01A 139 Out-of-Frame Intra-chr q11.22 80236 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WAC-LRRC37A6P WAC chr10 28824685 + LRRC37A6P chr10 27535625 - Exonic hg19 BRCA TCGA-AR-A0U4-01A 176 CDS-3'UTR Intra-chr p12.1 p12.1 Seq+ 80237 ChimerSeq Tophat-Fusion TCGA_RNA-Seq THBS1-FSIP1 THBS1 chr15 39886406 - FSIP1 chr15 39893097 - Exonic hg19 BRCA TCGA-A8-A08O-01A 128 Out-of-Frame Intra-chr q14 Oncogene Tumor suppressor gene q14 80238 ChimerSeq Tophat-Fusion TCGA_RNA-Seq YARS-ADM5 YARS chr1 33246635 - ADM5 chr19 50192782 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 106 Out-of-Frame Inter-chr p35.1 q13.33 Seq+ 80239 ChimerSeq Tophat-Fusion TCGA_RNA-Seq YARS-ADM5 YARS chr1 33246648 - ADM5 chr19 50192944 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 106 Out-of-Frame Inter-chr p35.1 q13.33 Seq+ 80240 ChimerSeq Tophat-Fusion TCGA_RNA-Seq YARS-ADM5 YARS chr1 33246648 - ADM5 chr19 50193146 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 106 Out-of-Frame Inter-chr p35.1 q13.33 Seq+ 80241 ChimerSeq Tophat-Fusion TCGA_RNA-Seq YARS-ADM5 YARS chr1 33246648 - ADM5 chr19 50193362 + Exonic hg19 BRCA TCGA-BH-A0B9-01A 106 Out-of-Frame Inter-chr p35.1 q13.33 Seq+ 80242 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WHSC1L1-ANK1 WHSC1L1 chr8 38205014 - ANK1 chr8 41615654 - Exonic hg19 BRCA TCGA-E2-A15A-01A 232 In-Frame Intra-chr p11.23 Tumor suppressor gene p11.21 Seq+ 80243 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KAT6A-ADAM2 KAT6A chr8 41905895 - ADAM2 chr8 39624769 - Exonic hg19 BRCA TCGA-E2-A15A-01A 246 In-Frame Intra-chr p11.21 Oncogene Seq+ 80244 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KAT6A-ADAM2 KAT6A chr8 41905895 - ADAM2 chr8 39627093 - Exonic hg19 BRCA TCGA-E2-A15A-01A 246 Out-of-Frame Intra-chr p11.21 Oncogene Seq+ 80245 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TIAM1-DOPEY2 TIAM1 chr21 32617801 - DOPEY2 chr21 37565715 - Exonic hg19 BRCA TCGA-A2-A0CW-01A 212 Out-of-Frame Intra-chr q22.11 q22.12 80246 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SNHG17-BCAS1 SNHG17 chr20 37055061 - BCAS1 chr20 52612588 - Exonic hg19 BRCA TCGA-AO-A03M-01B 106 Out-of-Frame Intra-chr q11.23 q13.2 Seq+ 80247 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LINC01605-KAT6A LINC01605 chr8 37337606 - KAT6A chr8 41905895 + Exonic hg19 BRCA TCGA-E2-A15A-01A 131 Out-of-Frame Intra-chr p11.23 p11.21 Oncogene 80248 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LINC01605-KAT6A LINC01605 chr8 37345950 - KAT6A chr8 41905895 + Exonic hg19 BRCA TCGA-E2-A15A-01A 132 Out-of-Frame Intra-chr p11.23 p11.21 Oncogene 80249 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RBL1-CTNNBL1 RBL1 chr20 35717391 - CTNNBL1 chr20 36500326 + Exonic hg19 BRCA TCGA-AO-A03M-01B 108 Out-of-Frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 80250 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DNAJC1-LOC100507377 DNAJC1 chr10 22193450 - LOC100507377 chr12 74668732 + Exonic hg19 BRCA TCGA-E2-A107-01A 100 CDS-3'UTR Inter-chr p12.31 80251 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TCF7L1-WIF1 TCF7L1 chr2 85361572 + WIF1 chr12 65471633 - Exonic hg19 BRCA TCGA-E2-A1LI-01A 156 In-Frame Inter-chr p11.2 Oncogene Transcription factor q14.3 Tumor suppressor gene Seq+ 80252 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 BRCA TCGA-AR-A1AQ-01A 547 Out-of-Frame Intra-chr q11.22 80253 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TFG-ADGRG7 TFG chr3 100438901 + ADGRG7 chr3 100348441 + Exonic hg19 BRCA TCGA-E9-A228-01A 150 Out-of-Frame Intra-chr q12.2 q12.2 KB Pub 80254 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KCNQ1-NAP1L4 KCNQ1 chr11 2861671 + NAP1L4 chr11 2997253 + Exonic hg19 BRCA TCGA-E9-A228-01A 146 Intra-chr p15.5 80255 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANO1-TENM4 ANO1 chr11 69962604 + TENM4 chr11 78972748 + Exonic hg19 BRCA TCGA-E9-A228-01A 106 Out-of-Frame Intra-chr q13.3 q14.1 80256 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PGAP1-SPAG16 PGAP1 chr2 197781140 - SPAG16 chr2 215198510 - Exonic hg19 BRCA TCGA-E9-A228-01A 138 Out-of-Frame Intra-chr q33.1 q34 Seq+ 80257 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PGAP1-SPAG16 PGAP1 chr2 197781141 - SPAG16 chr2 215195227 - Exonic hg19 BRCA TCGA-E9-A228-01A 138 In-Frame Intra-chr q33.1 q34 Seq+ 80258 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PGAP1-SPAG16 PGAP1 chr2 197781141 - SPAG16 chr2 215197614 - Exonic hg19 BRCA TCGA-E9-A228-01A 138 Out-of-Frame Intra-chr q33.1 q34 Seq+ 80259 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PGAP1-SPAG16 PGAP1 chr2 197781141 - SPAG16 chr2 215198510 - Exonic hg19 BRCA TCGA-E9-A228-01A 138 Out-of-Frame Intra-chr q33.1 q34 Seq+ 80260 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SSH2-LOC101927166 SSH2 chr17 28029976 - LOC101927166 chr17 46542808 + Exonic hg19 BRCA TCGA-C8-A275-01A 229 Out-of-Frame Intra-chr q11.2 80261 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SOGA1-ARHGAP40 SOGA1 chr20 35421651 - ARHGAP40 chr20 37277493 - Exonic hg19 BRCA TCGA-EW-A2FW-01A 243 In-Frame Intra-chr q11.23 q11.23 80262 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SOGA1-ARHGAP40 SOGA1 chr20 35421651 - ARHGAP40 chr20 37277496 - Exonic hg19 BRCA TCGA-EW-A2FW-01A 243 In-Frame Intra-chr q11.23 q11.23 80263 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235963 + Exonic hg19 BRCA TCGA-AR-A2LQ-01A 256 Out-of-Frame Intra-chr q11.22 80264 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KCNU1-PLEKHA2 KCNU1 chr8 36642078 + PLEKHA2 chr8 38801354 - Exonic hg19 BRCA TCGA-BH-A0EI-01A 138 In-Frame Intra-chr p11.23 p11.22 80265 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NFS1-PTPN1 NFS1 chr20 34283104 - PTPN1 chr20 49191190 - Exonic hg19 BRCA TCGA-EW-A2FW-01A 157 Out-of-Frame Intra-chr q11.22 q13.13 Tumor suppressor gene 80266 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NFS1-PTPN1 NFS1 chr20 34285949 - PTPN1 chr20 49191190 - Exonic hg19 BRCA TCGA-EW-A2FW-01A 150 In-Frame Intra-chr q11.22 q13.13 Tumor suppressor gene 80267 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KCNB1-ADNP KCNB1 chr20 47990840 - ADNP chr20 49518553 + Exonic hg19 BRCA TCGA-EW-A2FW-01A 517 Out-of-Frame Intra-chr q13.13 q13.13 Transcription factor 80268 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANK3-WIPF2 ANK3 chr10 61853588 - WIPF2 chr17 38429886 - Exonic hg19 BRCA TCGA-EW-A1OZ-01A 141 In-Frame Inter-chr q21.2 q21.2 80269 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ARHGAP35-COL22A1 ARHGAP35 chr19 47440664 + COL22A1 chr8 139793222 - Exonic hg19 BRCA TCGA-D8-A1XZ-01A 104 Out-of-Frame Inter-chr q13.32 Transcription factor q24.3 Seq+ 80270 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SRGAP1-GAB2 SRGAP1 chr12 64480805 + GAB2 chr11 77991946 - Exonic hg19 BRCA TCGA-A8-A0A9-01A 102 Out-of-Frame Inter-chr q14.2 q14.1 Seq+ 80271 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PI4KB-SELENBP1 PI4KB chr1 151297220 - SELENBP1 chr1 151342244 - Exonic hg19 BRCA TCGA-A8-A07C-01A 102 In-Frame Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 80272 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PI4KB-SELENBP1 PI4KB chr1 151298647 - SELENBP1 chr1 151342244 - Exonic hg19 BRCA TCGA-A8-A07C-01A 102 In-Frame Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 80273 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAB11FIP1-HTRA4 RAB11FIP1 chr8 37727937 - HTRA4 chr8 38836733 + Exonic hg19 BRCA TCGA-BH-A0EI-01A 138 In-Frame Intra-chr p11.23 p11.22 Seq+ 80274 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAB11FIP1-HTRA4 RAB11FIP1 chr8 37727937 - HTRA4 chr8 38839171 + Exonic hg19 BRCA TCGA-BH-A0EI-01A 138 In-Frame Intra-chr p11.23 p11.22 Seq+ 80275 ChimerSeq Tophat-Fusion TCGA_RNA-Seq APP-LOC101927973 APP chr21 27277335 - LOC101927973 chr21 29549550 + Exonic hg19 BRCA TCGA-C8-A275-01A 201 Out-of-Frame Intra-chr q21.3 80276 ChimerSeq Tophat-Fusion TCGA_RNA-Seq APP-LOC101927973 APP chr21 27277335 - LOC101927973 chr21 29563903 + Exonic hg19 BRCA TCGA-C8-A275-01A 279 Out-of-Frame Intra-chr q21.3 80277 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NARS2-SERINC3 NARS2 chr11 78154693 - SERINC3 chr20 43150553 + Exonic hg19 BRCA TCGA-EW-A2FW-01A 1087 Inter-chr q14.1 q13.12 Seq+ 80278 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIRREL3-GLB1L2 KIRREL3 chr11 126851965 - GLB1L2 chr11 134241721 - Exonic hg19 BRCA TCGA-EW-A2FW-01A 137 In-Frame Intra-chr q24.2 q25 80279 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF460-ELSPBP1 ZNF460 chr19 57796044 + ELSPBP1 chr19 48517427 + Exonic hg19 BRCA TCGA-A2-A0EV-01A 208 In-Frame Intra-chr q13.43 Transcription factor q13.33 Seq+ 80280 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF460-ELSPBP1 ZNF460 chr19 57796044 + ELSPBP1 chr19 48519149 + Exonic hg19 BRCA TCGA-A2-A0EV-01A 213 In-Frame Intra-chr q13.43 Transcription factor q13.33 Seq+ 80281 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF460-ELSPBP1 ZNF460 chr19 57796044 + ELSPBP1 chr19 48522975 + Exonic hg19 BRCA TCGA-A2-A0EV-01A 213 In-Frame Intra-chr q13.43 Transcription factor q13.33 Seq+ 80282 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF460-ELSPBP1 ZNF460 chr19 57796044 + ELSPBP1 chr19 48525426 + Exonic hg19 BRCA TCGA-A2-A0EV-01A 213 In-Frame Intra-chr q13.43 Transcription factor q13.33 Seq+ 80283 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-A7-A26F-01A 1111 Out-of-Frame Intra-chr q11.22 80284 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-AR-A1AJ-01A 331 Out-of-Frame Intra-chr q11.22 80285 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-LL-A5YO-01A 1715 Out-of-Frame Intra-chr q11.22 80286 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SKIV2L2-CETN3 SKIV2L2 chr5 54662702 + CETN3 chr5 89689923 - Exonic hg19 BRCA TCGA-C8-A27A-01A 100 In-Frame Intra-chr q11.2 q14.3 Seq+ 80287 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SERINC5-LOC102467147 SERINC5 chr5 79454658 - LOC102467147 chr5 55753769 - Exonic hg19 BRCA TCGA-C8-A27A-01A 147 Out-of-Frame Intra-chr q14.1 80288 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANO1-PLXDC1 ANO1 chr11 69924819 + PLXDC1 chr17 37228719 + Exonic hg19 BRCA TCGA-AC-A3QQ-01A 103 Out-of-Frame Inter-chr q13.3 q12 80289 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANO1-PLXDC1 ANO1 chr11 69926717 + PLXDC1 chr17 37224199 + Exonic hg19 BRCA TCGA-AC-A3QQ-01A 103 In-Frame Inter-chr q13.3 q12 80290 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RMDN1-PDXDC1 RMDN1 chr8 87494745 + PDXDC1 chr16 15134937 + Exonic hg19 BRCA TCGA-AC-A3QQ-01A 100 Out-of-Frame Inter-chr q21.3 p13.11 80291 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GMDS-LAMA1 GMDS chr6 2116004 - LAMA1 chr18 7076816 + Exonic hg19 BRCA TCGA-BH-A0HB-01A 407 In-Frame Inter-chr p25.3 p11.31 80292 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GMDS-LAMA1 GMDS chr6 2116004 - LAMA1 chr18 7079318 + Exonic hg19 BRCA TCGA-BH-A0HB-01A 402 In-Frame Inter-chr p25.3 p11.31 80293 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RHOC-RNF213 RHOC chr1 113244605 - RNF213 chr17 78314104 - Exonic hg19 BRCA TCGA-A2-A3XZ-01A 778 Out-of-Frame Inter-chr p13.2 q25.3 Oncogene 80294 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCAT18-KCTD1 PCAT18 chr18 24283355 - KCTD1 chr18 24081213 - Exonic hg19 BRCA TCGA-E9-A3Q9-01A 118 Out-of-Frame Intra-chr q11.2 q11.2 80295 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UTP18-BRIP1 UTP18 chr17 49346264 + BRIP1 chr17 59821541 + Exonic hg19 BRCA TCGA-BH-A0HB-01A 188 Out-of-Frame Intra-chr q21.33 q23.2 Oncogene 80296 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UTP18-BRIP1 UTP18 chr17 49346264 + BRIP1 chr17 59885842 + Exonic hg19 BRCA TCGA-BH-A0HB-01A 106 Out-of-Frame Intra-chr q21.33 q23.2 Oncogene 80297 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-BH-A0HA-01A 117 Out-of-Frame Intra-chr q11.22 80298 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANO6-IAPP ANO6 chr12 45816844 + IAPP chr12 21531170 + Exonic hg19 BRCA TCGA-E2-A1L8-01A 188 Out-of-Frame Intra-chr q12 p12.1 Seq+ 80299 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACOT9-APOO ACOT9 chrX 23739997 - APOO chrX 23899068 - Exonic hg19 BRCA TCGA-A7-A13D-01A 611 In-Frame Intra-chr p22.11 p22.11 Seq+ 80300 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CLDN9-HCFC1R1 CLDN9 chr16 3063974 - HCFC1R1 chr16 3072918 - Exonic hg19 BRCA TCGA-A7-A13D-01A 391 Out-of-Frame Intra-chr p13.3 p13.3 80301 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KCNU1-CYP7B1 KCNU1 chr8 36704930 - CYP7B1 chr8 65571309 - Exonic hg19 BRCA TCGA-A2-A0EX-01A 185 Out-of-Frame Intra-chr p11.23 q12.3 80302 ChimerSeq Tophat-Fusion TCGA_RNA-Seq APP-RCAN1 APP chr21 27484295 - RCAN1 chr21 35896007 - Exonic hg19 BRCA TCGA-A8-A08P-01A 119 In-Frame Intra-chr q21.3 q22.12 Seq+ 80303 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CD59-FBXO3 CD59 chr11 33731751 - FBXO3 chr11 33780146 - Exonic hg19 BRCA TCGA-A7-A13D-01A 144 Out-of-Frame Intra-chr p13 p13 Seq+ 80304 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HEATR5A-NPAS3 HEATR5A chr14 31784975 - NPAS3 chr14 33484228 - Exonic hg19 BRCA TCGA-A8-A06R-01A 112 Out-of-Frame Intra-chr q12 q13.1 Transcription factor 80305 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HEATR5A-NPAS3 HEATR5A chr14 31784975 - NPAS3 chr14 33489607 - Exonic hg19 BRCA TCGA-A8-A06R-01A 112 Out-of-Frame Intra-chr q12 q13.1 Transcription factor 80306 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KCNU1-ERLIN2 KCNU1 chr8 36705089 + ERLIN2 chr8 37603530 + Exonic hg19 BRCA TCGA-A2-A0EX-01A 156 Out-of-Frame Intra-chr p11.23 p11.23 80307 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF252P-TMED10 ZNF252P chr8 146220626 + TMED10 chr14 75618828 - Exonic hg19 BRCA TCGA-A8-A06R-01A 197 3'UTR-CDS Inter-chr q24.3 q24.3 80308 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-AO-A03R-01A 109 Out-of-Frame Intra-chr q11.22 80309 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-BH-A0B3-11B 112 Out-of-Frame Intra-chr q11.22 80310 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KTN1-NADSYN1 KTN1 chr14 56114806 + NADSYN1 chr11 71180186 + Exonic hg19 BRCA TCGA-A2-A0D4-01A 283 Inter-chr q22.3 q13.4 80311 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GATA3-TAF3 GATA3 chr10 8111560 + TAF3 chr10 8055693 + Exonic hg19 BRCA TCGA-AR-A1AP-01A 597 In-Frame Intra-chr p14 Oncogene Transcription factor p14 Seq+ 80312 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LINC00930-CHD2 LINC00930 chr15 93113460 - CHD2 chr15 93552552 - Exonic hg19 BRCA TCGA-D8-A1XU-01A 112 Out-of-Frame Intra-chr q26.1 q26.1 80313 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZSWIM3-LOC101927770 ZSWIM3 chr20 44491589 - LOC101927770 chr20 52183897 + Exonic hg19 BRCA TCGA-E2-A105-01A 322 Out-of-Frame Intra-chr q13.12 80314 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LOC101928295-EEF1A2 LOC101928295 chr19 49877973 - EEF1A2 chr20 62121831 + Exonic hg19 BRCA TCGA-D8-A1XD-01A 371 Out-of-Frame Inter-chr q13.33 80315 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ESR1-CCDC170 ESR1 chr6 152064277 + CCDC170 chr6 151930152 + Exonic hg19 BRCA TCGA-A2-A4S3-01A 271 5'UTR-CDS Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.1 KB Pub Seq+ 80316 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-AQ-A1H3-01A 509 Out-of-Frame Intra-chr q11.22 80317 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DGKD-USP40 DGKD chr2 234299128 + USP40 chr2 234431807 + Exonic hg19 BRCA TCGA-E9-A1RH-01A 136 Out-of-Frame Intra-chr q37.1 80318 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PBX1-COPG2 PBX1 chr1 164532547 + COPG2 chr7 130148499 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 1165 In-Frame Inter-chr q23.3 Oncogene Transcription factor q32.2 Seq+ 80319 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PIH1D1-ALDH16A1 PIH1D1 chr19 49954741 - ALDH16A1 chr19 49961742 + Exonic hg19 BRCA TCGA-D8-A1XD-01A 103 In-Frame Intra-chr q13.33 q13.33 Seq+ 80320 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LINC01237-LOC728323 LINC01237 chr2 242853047 + LOC728323 chr2 243037037 + Exonic hg19 BRCA TCGA-BH-A1EV-01A 108 Out-of-Frame Intra-chr q37.3 80321 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CPD-AATF CPD chr17 28748000 + AATF chr17 35376303 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 445 In-Frame Intra-chr q11.2 Tumor suppressor gene Seq+ 80322 ChimerSeq Tophat-Fusion TCGA_RNA-Seq POGK-FMOD POGK chr1 166810324 + FMOD chr1 203311621 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 117 Out-of-Frame Intra-chr q24.1 Transcription factor q32.1 Seq+ 80323 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DDX5-ART1 DDX5 chr17 62499547 - ART1 chr11 3685321 + Exonic hg19 BRCA TCGA-E9-A1RH-01A 223 In-Frame Inter-chr q23.3 p15.4 Tumor suppressor gene Seq+ 80324 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD21-HK1 RAD21 chr8 117861126 - HK1 chr10 71146173 - Exonic hg19 BRCA TCGA-E9-A1RH-01A 124 In-Frame Inter-chr q24.11 q22.1 80325 ChimerSeq Tophat-Fusion TCGA_RNA-Seq VMP1-RNFT1 VMP1 chr17 57851245 + RNFT1 chr17 58031506 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 131 In-Frame Intra-chr q23.1 q23.1 Seq+ 80326 ChimerSeq Tophat-Fusion TCGA_RNA-Seq C17orf75-ZNF207 C17orf75 chr17 30664939 - ZNF207 chr17 30678930 - Exonic hg19 BRCA TCGA-A2-A1FW-01A 101 Out-of-Frame Intra-chr q11.2 q11.2 Transcription factor Seq+ 80327 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RASEF-FRMD3 RASEF chr9 85645598 - FRMD3 chr9 86152999 + Exonic hg19 BRCA TCGA-D8-A1XD-01A 179 Out-of-Frame Intra-chr q21.32 q21.32 80328 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RASEF-FRMD3 RASEF chr9 85651086 - FRMD3 chr9 86152999 + Exonic hg19 BRCA TCGA-D8-A1XD-01A 179 Out-of-Frame Intra-chr q21.32 q21.32 80329 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TUFT1-PRKCA TUFT1 chr1 151512901 + PRKCA chr17 64782984 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 395 In-Frame Inter-chr q21.3 q24.2 Seq+ 80330 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAB3GAP2-CNIH4 RAB3GAP2 chr1 220383729 - CNIH4 chr1 224563496 + Exonic hg19 BRCA TCGA-A2-A1FW-01A 176 Out-of-Frame Intra-chr q41 q42.11 Seq+ 80331 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PARK7-FAM186B PARK7 chr1 8025447 + FAM186B chr12 49988964 + Exonic hg19 BRCA TCGA-B6-A0IC-01A 100 In-Frame Inter-chr p36.23 Tumor suppressor gene q13.12 80332 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-AC-A3W5-01A 236 Out-of-Frame Intra-chr q11.22 80333 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WAC-APBB1IP WAC chr10 28824685 + APBB1IP chr10 26849033 + Exonic hg19 BRCA TCGA-AO-A0JI-01A 135 Out-of-Frame Intra-chr p12.1 p12.1 Seq+ 80334 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPTC7-TCTN1 PPTC7 chr12 110989593 - TCTN1 chr12 111065980 - Exonic hg19 BRCA TCGA-C8-A26X-01A 266 Out-of-Frame Intra-chr q24.11 q24.11 80335 ChimerSeq Tophat-Fusion TCGA_RNA-Seq IDE-FRA10AC1 IDE chr10 94292613 - FRA10AC1 chr10 95445787 + Exonic hg19 BRCA TCGA-BH-A0HP-01A 111 Out-of-Frame Intra-chr q23.33 q23.33 80336 ChimerSeq Tophat-Fusion TCGA_RNA-Seq IDE-FRA10AC1 IDE chr10 94292613 - FRA10AC1 chr10 95447159 + Exonic hg19 BRCA TCGA-BH-A0HP-01A 112 In-Frame Intra-chr q23.33 q23.33 80337 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CPD-MYO1D CPD chr17 28706743 + MYO1D chr17 31122704 + Exonic hg19 BRCA TCGA-AC-A3W5-01A 343 Out-of-Frame Intra-chr q11.2 Tumor suppressor gene q11.2 80338 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 BRCA TCGA-BH-A0B2-01A 301 Out-of-Frame Intra-chr q11.22 80339 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TTC3-TMPRSS2 TTC3 chr21 38480745 + TMPRSS2 chr21 42840163 + Exonic hg19 BRCA TCGA-C8-A130-01A 125 Out-of-Frame Intra-chr q22.13 q22.3 80340 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TTC3-TMPRSS2 TTC3 chr21 38489250 + TMPRSS2 chr21 42838699 + Exonic hg19 BRCA TCGA-C8-A130-01A 113 In-Frame Intra-chr q22.13 q22.3 80341 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTTN-SHANK2 CTTN chr11 70275304 + SHANK2 chr11 70687785 + Exonic hg19 BRCA TCGA-AC-A3OD-01A 183 Out-of-Frame Intra-chr q13.3 q13.4 Seq+ 80342 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTTN-SHANK2 CTTN chr11 70275546 + SHANK2 chr11 70683444 + Exonic hg19 BRCA TCGA-AC-A3OD-01A 183 In-Frame Intra-chr q13.3 q13.4 Seq+ 80343 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NEU3-NDUFV1 NEU3 chr11 74700198 + NDUFV1 chr11 67375866 + Exonic hg19 BRCA TCGA-AC-A3OD-01A 127 Out-of-Frame Intra-chr q13.4 q13.2 Seq+ 80344 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NEU3-NDUFV1 NEU3 chr11 74700198 + NDUFV1 chr11 67375870 + Exonic hg19 BRCA TCGA-AC-A3OD-01A 127 Out-of-Frame Intra-chr q13.4 q13.2 Seq+ 80345 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLF1-ZMYM2 SLF1 chr5 93977098 + ZMYM2 chr13 20641529 - Exonic hg19 BRCA TCGA-AC-A3OD-01A 107 Out-of-Frame Inter-chr q15 q12.11 80346 ChimerSeq Tophat-Fusion TCGA_RNA-Seq VWCE-RAB1B VWCE chr11 61041071 - RAB1B chr11 66039930 - Exonic hg19 BRCA TCGA-D8-A27N-01A 129 In-Frame Intra-chr q12.2 q13.2 80347 ChimerSeq Tophat-Fusion TCGA_RNA-Seq VWCE-RAB1B VWCE chr11 61045820 - RAB1B chr11 66039930 - Exonic hg19 BRCA TCGA-D8-A27N-01A 129 In-Frame Intra-chr q12.2 q13.2 80348 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PHB-LSM1 PHB chr17 47490538 - LSM1 chr8 38029550 - Exonic hg19 BRCA TCGA-A2-A0CU-01A 127 In-Frame Inter-chr q21.33 Tumor suppressor gene p11.23 Seq+ 80349 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HPRT1-CTPS2 HPRT1 chrX 133609393 + CTPS2 chrX 16657365 - Exonic hg19 BRCA TCGA-AR-A24W-01A 513 In-Frame Intra-chr q26.2 p22.2 Seq+ 80350 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BRWD1-DSCAM BRWD1 chr21 40636385 - DSCAM chr21 41607576 + Exonic hg19 BRCA TCGA-E2-A1LG-01A 236 Out-of-Frame Intra-chr q22.2 q22.2 Seq+ 80351 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MSI2-PCTP MSI2 chr17 55339552 + PCTP chr17 53844695 + Exonic hg19 BRCA TCGA-D8-A27F-01A 174 In-Frame Intra-chr q22 q22 Seq+ 80352 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-B6-A0IG-01A 120 Out-of-Frame Intra-chr q11.22 80353 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677324 + IGLL5 chr22 23235963 + Exonic hg19 BRCA TCGA-E2-A1LG-01A 803 Out-of-Frame Intra-chr q11.22 80354 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GNAI3-SARS GNAI3 chr1 110091459 + SARS chr1 109766599 + Exonic hg19 BRCA TCGA-E2-A14P-01A 259 In-Frame Intra-chr p13.3 p13.3 Seq+ 80355 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WARS2-ASIC2 WARS2 chr1 119618972 - ASIC2 chr17 31749746 + Exonic hg19 BRCA TCGA-B6-A0IG-01A 198 Out-of-Frame Inter-chr p12 q12 80356 ChimerSeq Tophat-Fusion TCGA_RNA-Seq THBS1-FSIP1 THBS1 chr15 39879521 - FSIP1 chr15 39893126 - Exonic hg19 BRCA TCGA-A7-A26J-01B 115 Out-of-Frame Intra-chr q14 Oncogene Tumor suppressor gene q14 80357 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FNTA-NKAIN3 FNTA chr8 42927449 + NKAIN3 chr8 63679968 - Exonic hg19 BRCA TCGA-E2-A1LG-01A 120 Out-of-Frame Intra-chr p11.21 q12.3 80358 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SMARCC1-DHX30 SMARCC1 chr3 47770514 - DHX30 chr3 47857642 - Exonic hg19 BRCA TCGA-B6-A0I1-01A 139 Out-of-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 80359 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KDM2A-RHOD KDM2A chr11 67017816 + RHOD chr11 66833366 + Exonic hg19 BRCA TCGA-B6-A0IG-01A 139 Out-of-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 80360 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KDM2A-RHOD KDM2A chr11 67018268 + RHOD chr11 66833366 + Exonic hg19 BRCA TCGA-B6-A0IG-01A 139 Out-of-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 80361 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF703-EIF4EBP1 ZNF703 chr8 37553739 + EIF4EBP1 chr8 37914598 + Exonic hg19 BRCA TCGA-AR-A5QQ-01A 285 Out-of-Frame Intra-chr p11.23 Transcription factor p11.23 Seq+ 80362 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 BRCA TCGA-LD-A66U-01A 205 Out-of-Frame Intra-chr q11.22 80363 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-EW-A1PA-01A 261 Out-of-Frame Intra-chr q11.22 80364 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TFAP2A-GCNT2 TFAP2A chr6 10400983 - GCNT2 chr6 10530068 - Exonic hg19 BRCA TCGA-C8-A12K-01A 124 In-Frame Intra-chr p24.3 Tumor suppressor gene Transcription factor p24.3 80365 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CPD-GOSR1 CPD chr17 28756582 + GOSR1 chr17 28819770 - Exonic hg19 BRCA TCGA-C8-A12K-01A 193 Out-of-Frame Intra-chr q11.2 Tumor suppressor gene q11.2 80366 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ELP2-MAPRE2 ELP2 chr18 33734961 + MAPRE2 chr18 32681909 + Exonic hg19 BRCA TCGA-A2-A0D2-01A 171 In-Frame Intra-chr q12.2 q12.1 Seq+ 80367 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-AR-A0TU-01A 131 Out-of-Frame Intra-chr q11.22 80368 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-LD-A9QF-01A 295 Out-of-Frame Intra-chr q11.22 80369 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CLSTN1-CTNNBIP1 CLSTN1 chr1 9833329 - CTNNBIP1 chr1 9910833 - Exonic hg19 BRCA TCGA-AR-A0TU-01A 166 In-Frame Intra-chr p36.22 p36.22 Tumor suppressor gene Seq+ 80370 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SEC61A2-MAPK14 SEC61A2 chr10 12209809 + MAPK14 chr6 36059929 + Exonic hg19 BRCA TCGA-A2-A0T0-01A 166 In-Frame Inter-chr p14 p21.31 80371 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677324 + IGLL5 chr22 23235963 + Exonic hg19 BRCA TCGA-A2-A0EY-01A 330 Out-of-Frame Intra-chr q11.22 80372 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ATP8B1-NARS ATP8B1 chr18 55398858 - NARS chr18 55278938 - Exonic hg19 BRCA TCGA-AO-A03O-01A 168 Intra-chr q21.31 q21.31 Seq+ 80373 ChimerSeq Tophat-Fusion TCGA_RNA-Seq THADA-PPM1B THADA chr2 43489476 - PPM1B chr2 44436465 - Exonic hg19 BRCA TCGA-AN-A0AT-01A 127 Out-of-Frame Intra-chr p21 p21 80374 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DOCK5-KIF13B DOCK5 chr8 25168047 + KIF13B chr8 29113767 + Exonic hg19 BRCA TCGA-BH-A18I-01A 263 Out-of-Frame Intra-chr p21.2 p12 80375 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DOCK5-KIF13B DOCK5 chr8 25168169 + KIF13B chr8 29120496 + Exonic hg19 BRCA TCGA-BH-A18I-01A 240 In-Frame Intra-chr p21.2 p12 80376 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CAPZA2-CFTR CAPZA2 chr7 116552193 + CFTR chr7 117133981 - Exonic hg19 BRCA TCGA-AC-A2QH-01B 182 Out-of-Frame Intra-chr q31.2 q31.2 Tumor suppressor gene 80377 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CAPZA2-CFTR CAPZA2 chr7 116552193 + CFTR chr7 117137596 - Exonic hg19 BRCA TCGA-AC-A2QH-01B 186 Out-of-Frame Intra-chr q31.2 q31.2 Tumor suppressor gene 80378 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CAPZA2-CFTR CAPZA2 chr7 116552193 + CFTR chr7 117137734 - Exonic hg19 BRCA TCGA-AC-A2QH-01B 206 Out-of-Frame Intra-chr q31.2 q31.2 Tumor suppressor gene 80379 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TCF3-JAK2 TCF3 chr19 1615718 - JAK2 chr9 5112398 + Exonic hg19 BRCA TCGA-OL-A5S0-01A 124 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p24.1 TK:JakA Oncogene 80380 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RGS6-CETP RGS6 chr14 72632039 + CETP chr16 57009062 - Exonic hg19 BRCA TCGA-A8-A06U-01A 196 In-Frame Inter-chr q24.2 q13 80381 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MPDZ-B4GALT1 MPDZ chr9 13190160 - B4GALT1 chr9 33135186 + Exonic hg19 BRCA TCGA-AN-A04D-01A 690 In-Frame Intra-chr p23 p21.1 80382 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FRS2-MYRFL FRS2 chr12 69864309 + MYRFL chr12 70284750 + Exonic hg19 BRCA TCGA-A8-A08F-01A 227 Out-of-Frame Intra-chr q15 q15 Transcription factor 80383 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0100-UBE2Z KIAA0100 chr17 26961600 - UBE2Z chr17 47000298 - Exonic hg19 BRCA TCGA-E2-A1LB-01A 147 Out-of-Frame Intra-chr q11.2 q21.32 80384 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TAOK1-NSRP1 TAOK1 chr17 27718041 + NSRP1 chr17 28499559 + Exonic hg19 BRCA TCGA-E2-A1LB-01A 142 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 80385 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ADGRG1-LOC100996338 ADGRG1 chr16 57653792 + LOC100996338 chr16 54280873 - Exonic hg19 BRCA TCGA-A8-A06U-01A 2195 Out-of-Frame Intra-chr q21 80386 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ADGRG1-LOC100996338 ADGRG1 chr16 57654047 + LOC100996338 chr16 54280873 - Exonic hg19 BRCA TCGA-A8-A06U-01A 2195 Out-of-Frame Intra-chr q21 80387 ChimerSeq Tophat-Fusion TCGA_RNA-Seq REEP5-XBP1 REEP5 chr5 112221786 - XBP1 chr22 29191199 + Exonic hg19 BRCA TCGA-A8-A08F-01A 637 Out-of-Frame Inter-chr q22.2 q12.1 Transcription factor 80388 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 BRCA TCGA-S3-AA17-01A 3009 Out-of-Frame Intra-chr q11.22 80389 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677324 + IGLL5 chr22 23235963 + Exonic hg19 BRCA TCGA-A2-A0YH-01A 583 Out-of-Frame Intra-chr q11.22 80390 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SSH2-LBP SSH2 chr17 28022476 - LBP chr20 37002580 + Exonic hg19 BRCA TCGA-AN-A0FT-01A 142 Out-of-Frame Inter-chr q11.2 q11.23 Seq+ 80391 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MRPL21-SSH3 MRPL21 chr11 68663982 - SSH3 chr11 67074308 + Exonic hg19 BRCA TCGA-E2-A15O-01A 116 In-Frame Intra-chr q13.3 q13.2 Seq+ 80392 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERBB2-NARS2 ERBB2 chr17 37866733 + NARS2 chr11 78147859 - Exonic hg19 BRCA TCGA-BH-A1EN-01A 1917 Inter-chr q12 Oncogene q14.1 Seq+ 80393 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LOC101927318-AQP5 LOC101927318 chr12 50356090 - AQP5 chr12 50357274 + Exonic hg19 BRCA TCGA-BH-A1EN-01A 104 Out-of-Frame Intra-chr q13.12 80394 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KDM3A-ANK3 KDM3A chr2 86684193 + ANK3 chr10 61817353 + Exonic hg19 BRCA TCGA-AR-A1AN-01A 116 In-Frame Inter-chr p11.2 Tumor suppressor gene q21.2 80395 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KDM3A-ANK3 KDM3A chr2 86684193 + ANK3 chr10 61819091 + Exonic hg19 BRCA TCGA-AR-A1AN-01A 125 In-Frame Inter-chr p11.2 Tumor suppressor gene q21.2 80396 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KDM3A-ANK3 KDM3A chr2 86687953 + ANK3 chr10 61819091 + Exonic hg19 BRCA TCGA-AR-A1AN-01A 125 In-Frame Inter-chr p11.2 Tumor suppressor gene q21.2 80397 ChimerSeq Tophat-Fusion TCGA_RNA-Seq VMP1-C17orf64 VMP1 chr17 57851245 + C17orf64 chr17 58503143 + Exonic hg19 BRCA TCGA-AR-A24R-01A 236 In-Frame Intra-chr q23.1 q23.2 Seq+ 80398 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BCAS3-PIGU BCAS3 chr17 58804920 + PIGU chr20 33244983 + Exonic hg19 BRCA TCGA-AR-A24R-01A 161 Out-of-Frame Inter-chr q23.2 q11.22 80399 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SORL1-TECTA SORL1 chr11 121403260 + TECTA chr11 121058540 + Exonic hg19 BRCA TCGA-E9-A22G-01A 358 In-Frame Intra-chr q24.1 q23.3 Seq+ 80400 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NUP214-AIF1L NUP214 chr9 134006222 + AIF1L chr9 133986983 + Exonic hg19 BRCA TCGA-E9-A22G-01A 301 In-Frame Intra-chr q34.13 Oncogene q34.12 Seq+ 80401 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CDH1-UTP4 CDH1 chr16 68835795 + UTP4 chr16 69170598 + Exonic hg19 BRCA TCGA-A7-A6VX-01A 406 Out-of-Frame Intra-chr q22.1 Oncogene Tumor suppressor gene q22.1 80402 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TFG-ADGRG7 TFG chr3 100438901 + ADGRG7 chr3 100348441 + Exonic hg19 BRCA TCGA-A7-A26I-01A 275 Out-of-Frame Intra-chr q12.2 q12.2 KB Pub 80403 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FAM3C-SUSD2 FAM3C chr7 121011353 - SUSD2 chr22 24581061 + Exonic hg19 BRCA TCGA-E9-A247-01A 137 In-Frame Inter-chr q31.31 q11.23 Seq+ 80404 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ROCK2-GREB1 ROCK2 chr2 11363386 - GREB1 chr2 11735530 - Exonic hg19 BRCA TCGA-AO-A0JD-01A 356 In-Frame Intra-chr p25.1 AGC:DMPK p25.1 80405 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 BRCA TCGA-EW-A6S9-01A 149 Out-of-Frame Intra-chr q11.22 80406 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235963 + Exonic hg19 BRCA TCGA-A8-A096-01A 100 Out-of-Frame Intra-chr q11.22 80407 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTGFRN-TRIM45 PTGFRN chr1 117489862 + TRIM45 chr1 117657228 + Exonic hg19 BRCA TCGA-E2-A1LS-01A 364 Out-of-Frame Intra-chr p13.1 p13.1 80408 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SPTBN4-NUMBL SPTBN4 chr19 41061000 + NUMBL chr19 41188632 + Exonic hg19 BRCA TCGA-BH-A18V-01A 112 In-Frame Intra-chr q13.2 q13.2 80409 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SPTBN4-NUMBL SPTBN4 chr19 41063353 + NUMBL chr19 41188632 + Exonic hg19 BRCA TCGA-BH-A18V-01A 112 Out-of-Frame Intra-chr q13.2 q13.2 80410 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPP2CA-CDKL3 PPP2CA chr5 133561450 - CDKL3 chr5 133640257 - Exonic hg19 BRCA TCGA-AO-A0JD-01A 170 In-Frame Intra-chr q31.1 Tumor suppressor gene q31.1 CMGC:CDKL Seq+ 80411 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPP2CA-CDKL3 PPP2CA chr5 133561450 - CDKL3 chr5 133642392 - Exonic hg19 BRCA TCGA-AO-A0JD-01A 170 Out-of-Frame Intra-chr q31.1 Tumor suppressor gene q31.1 CMGC:CDKL Seq+ 80412 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPP2CA-CDKL3 PPP2CA chr5 133561450 - CDKL3 chr5 133644156 - Exonic hg19 BRCA TCGA-AO-A0JD-01A 170 In-Frame Intra-chr q31.1 Tumor suppressor gene q31.1 CMGC:CDKL Seq+ 80413 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPP2CA-CDKL3 PPP2CA chr5 133561450 - CDKL3 chr5 133644417 - Exonic hg19 BRCA TCGA-AO-A0JD-01A 163 Out-of-Frame Intra-chr q31.1 Tumor suppressor gene q31.1 CMGC:CDKL Seq+ 80414 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SARS-KIAA1324 SARS chr1 109756749 + KIAA1324 chr1 109704515 + Exonic hg19 BRCA TCGA-BH-A18V-01A 147 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 80415 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SARS-KIAA1324 SARS chr1 109766669 + KIAA1324 chr1 109704515 + Exonic hg19 BRCA TCGA-BH-A18V-01A 125 In-Frame Intra-chr p13.3 p13.3 Seq+ 80416 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NGRN-IQGAP1 NGRN chr15 90809522 + IQGAP1 chr15 90969497 - Exonic hg19 BRCA TCGA-E9-A1NF-01A 150 In-Frame Intra-chr q26.1 q26.1 80417 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPM1D-TRIM37 PPM1D chr17 58711337 + TRIM37 chr17 57060281 - Exonic hg19 BRCA TCGA-E2-A14V-01A 271 Out-of-Frame Intra-chr q23.2 q22 Seq+ 80418 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTEN-RPL11 PTEN chr10 89705770 + RPL11 chr1 24022859 + Exonic hg19 BRCA TCGA-E2-A1LS-01A 202 Out-of-Frame Inter-chr q23.31 Oncogene Tumor suppressor gene p36.11 Tumor suppressor gene 80419 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-BH-A0DL-01A 1675 Out-of-Frame Intra-chr q11.22 80420 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CASC8-PVT1 CASC8 chr8 128411137 - PVT1 chr8 128903243 - Exonic hg19 BRCA TCGA-E2-A158-01A 148 Out-of-Frame Intra-chr q24.21 q24.21 80421 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CASC8-PVT1 CASC8 chr8 128411137 - PVT1 chr8 128951921 - Exonic hg19 BRCA TCGA-E2-A158-01A 493 Out-of-Frame Intra-chr q24.21 q24.21 80422 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR49-THSD4 WDR49 chr3 167277784 - THSD4 chr15 72022818 - Exonic hg19 BRCA TCGA-E2-A15A-06A 140 Out-of-Frame Inter-chr q26.1 q23 80423 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR49-THSD4 WDR49 chr3 167279029 - THSD4 chr15 72021062 - Exonic hg19 BRCA TCGA-E2-A15A-06A 140 Out-of-Frame Inter-chr q26.1 q23 80424 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAB11FIP1-UNC5D RAB11FIP1 chr8 37734626 - UNC5D chr8 35647876 + Exonic hg19 BRCA TCGA-S3-A6ZH-01A 133 Out-of-Frame Intra-chr p11.23 p12 Tumor suppressor gene Seq+ 80425 ChimerSeq Tophat-Fusion TCGA_RNA-Seq THBS1-FSIP1 THBS1 chr15 39886255 - FSIP1 chr15 39910445 - Exonic hg19 BRCA TCGA-E2-A15A-06A 113 Out-of-Frame Intra-chr q14 Oncogene Tumor suppressor gene q14 80426 ChimerSeq Tophat-Fusion TCGA_RNA-Seq THBS1-FSIP1 THBS1 chr15 39886255 - FSIP1 chr15 39931613 - Exonic hg19 BRCA TCGA-E2-A15A-06A 125 In-Frame Intra-chr q14 Oncogene Tumor suppressor gene q14 80427 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GUCD1-SNRPD3 GUCD1 chr22 24938622 - SNRPD3 chr22 24953767 - Exonic hg19 BRCA TCGA-E2-A158-01A 137 Out-of-Frame Intra-chr q11.23 q11.23 80428 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GUCD1-SNRPD3 GUCD1 chr22 24948042 - SNRPD3 chr22 24953767 - Exonic hg19 BRCA TCGA-E2-A158-01A 132 Out-of-Frame Intra-chr q11.23 q11.23 80429 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GUCD1-SNRPD3 GUCD1 chr22 24948051 - SNRPD3 chr22 24953767 - Exonic hg19 BRCA TCGA-E2-A158-01A 132 Out-of-Frame Intra-chr q11.23 q11.23 80430 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KAT6A-ADAM2 KAT6A chr8 41905895 - ADAM2 chr8 39624769 - Exonic hg19 BRCA TCGA-E2-A15A-06A 111 In-Frame Intra-chr p11.21 Oncogene Seq+ 80431 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KAT6A-ADAM2 KAT6A chr8 41905895 - ADAM2 chr8 39627093 - Exonic hg19 BRCA TCGA-E2-A15A-06A 111 Out-of-Frame Intra-chr p11.21 Oncogene Seq+ 80432 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTPRT-STK4 PTPRT chr20 41076859 - STK4 chr20 43671079 - Exonic hg19 BRCA TCGA-E2-A106-01A 382 Out-of-Frame Intra-chr q13.11 Oncogene Tumor suppressor gene q13.12 80433 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRRC2B-NUP214 PRRC2B chr9 134340464 + NUP214 chr9 134050846 + Exonic hg19 BRCA TCGA-A8-A09N-01A 162 In-Frame Intra-chr q34.13 q34.13 Oncogene Seq+ 80434 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPRD1A-ELP2 RPRD1A chr18 33580258 - ELP2 chr18 33718388 - Exonic hg19 BRCA TCGA-GM-A2DB-01A 153 Out-of-Frame Intra-chr q12.2 q12.2 80435 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPRD1A-ELP2 RPRD1A chr18 33580258 - ELP2 chr18 33726010 - Exonic hg19 BRCA TCGA-GM-A2DB-01A 153 In-Frame Intra-chr q12.2 q12.2 80436 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TBCD-SLC9A3R1 TBCD chr17 80847572 + SLC9A3R1 chr17 72758150 + Exonic hg19 BRCA TCGA-A7-A26G-01A 126 In-Frame Intra-chr q25.1 Tumor suppressor gene Seq+ 80437 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CHAF1A-CCDC94 CHAF1A chr19 4428886 + CCDC94 chr19 4261990 + Exonic hg19 BRCA TCGA-OL-A5D7-01A 128 In-Frame Intra-chr p13.3 p13.3 Seq+ 80438 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EIF3A-GRK5 EIF3A chr10 120797912 - GRK5 chr10 121060194 - Exonic hg19 BRCA TCGA-OL-A5D7-01A 286 In-Frame Intra-chr q26.11 q26.11 80439 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-A7-A26G-01A 822 Out-of-Frame Intra-chr q11.22 80440 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LOC101929099-MAN1A2 LOC101929099 chr1 117576481 - MAN1A2 chr1 118009048 - Exonic hg19 BRCA TCGA-OL-A5D7-01A 115 Out-of-Frame Intra-chr p12 80441 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CASC8-PVT1 CASC8 chr8 128427132 - PVT1 chr8 128806979 - Exonic hg19 BRCA TCGA-BH-A18T-01A 222 Out-of-Frame Intra-chr q24.21 q24.21 80442 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DCAF6-MPZL1 DCAF6 chr1 167974030 + MPZL1 chr1 167734819 + Exonic hg19 BRCA TCGA-A7-A26G-01A 154 In-Frame Intra-chr q24.2 q24.2 KB Seq+ 80443 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UBE2J2-GNB1 UBE2J2 chr1 1203241 - GNB1 chr1 1736019 - Exonic hg19 BRCA TCGA-BH-A18T-01A 147 Out-of-Frame Intra-chr p36.33 p36.33 Seq+ 80444 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPARG-PEX5 PPARG chr3 12442160 + PEX5 chr12 7354436 - Exonic hg19 BRCA TCGA-BH-A18T-01A 121 Out-of-Frame Inter-chr p25.2 Oncogene Tumor suppressor gene Transcription factor p13.31 80445 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPARG-PEX5 PPARG chr3 12442160 + PEX5 chr12 7355299 - Exonic hg19 BRCA TCGA-BH-A18T-01A 121 In-Frame Inter-chr p25.2 Oncogene Tumor suppressor gene Transcription factor p13.31 80446 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PSMD4-RIIAD1 PSMD4 chr1 151234776 + RIIAD1 chr1 151701869 - Exonic hg19 BRCA TCGA-BH-A18T-01A 118 CDS-3'UTR Intra-chr q21.3 q21.3 80447 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LRRFIP2-GOLGA4 LRRFIP2 chr3 37170553 - GOLGA4 chr3 37341837 - Exonic hg19 BRCA TCGA-OL-A5D7-01A 307 Out-of-Frame Intra-chr p22.2 p22.2 80448 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 BRCA TCGA-A8-A08X-01A 4779 Out-of-Frame Intra-chr q11.22 80449 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PALLD-NAA15 PALLD chr4 169589518 + NAA15 chr4 140291364 + Exonic hg19 BRCA TCGA-AN-A04C-01A 151 Intra-chr q32.3 q31.1 Seq+ 80450 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PGAP3-STAC2 PGAP3 chr17 37844086 - STAC2 chr17 37373425 - Exonic hg19 BRCA TCGA-A8-A08X-01A 320 In-Frame Intra-chr q12 Oncogene q12 Seq+ 80451 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AP2B1-TOP2A AP2B1 chr17 34001339 + TOP2A chr17 38567244 + Exonic hg19 BRCA TCGA-A8-A08X-01A 152 Out-of-Frame Intra-chr q12 q21.2 80452 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OPCML-NTM OPCML chr11 132812820 - NTM chr11 132016175 + Exonic hg19 BRCA TCGA-AC-A23E-01A 110 In-Frame Intra-chr q25 Tumor suppressor gene q25 Seq+ 80453 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLFN11-MIEN1 SLFN11 chr17 33700492 - MIEN1 chr17 37886543 - Exonic hg19 BRCA TCGA-A8-A08X-01A 148 5'UTR-CDS Intra-chr q12 q12 Seq+ 80454 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TDRD12-CEP89 TDRD12 chr19 33262030 + CEP89 chr19 33414344 + Exonic hg19 BRCA TCGA-A2-A0T3-01A 110 In-Frame Intra-chr q13.11 q13.11 80455 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FAM129B-OLFM1 FAM129B chr9 130331098 - OLFM1 chr9 137982040 + Exonic hg19 BRCA TCGA-A8-A08X-01A 108 In-Frame Intra-chr q34.11 q34.3 Seq+ 80456 ChimerSeq Tophat-Fusion TCGA_RNA-Seq C11orf49-ASNA1 C11orf49 chr11 47063161 + ASNA1 chr19 12856311 - Exonic hg19 BRCA TCGA-AR-A5QP-01A 149 In-Frame Inter-chr p11.2 p13.13 80457 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677319 + IGLL5 chr22 23235958 + Exonic hg19 BRCA TCGA-5L-AAT1-01A 223 Out-of-Frame Intra-chr q11.22 80458 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-A7-A26F-01A 158 Out-of-Frame Intra-chr q11.22 80459 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPP1R1B-ERBB2 PPP1R1B chr17 37783927 + ERBB2 chr17 37879912 - Exonic hg19 BRCA TCGA-UL-AAZ6-01A 404 In-Frame Intra-chr q12 Tumor suppressor gene q12 Oncogene 80460 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPP1R1B-ERBB2 PPP1R1B chr17 37783962 + ERBB2 chr17 37879912 - Exonic hg19 BRCA TCGA-UL-AAZ6-01A 404 Out-of-Frame Intra-chr q12 Tumor suppressor gene q12 Oncogene 80461 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ADAM2-MAVS ADAM2 chr8 39626883 - MAVS chr20 3835387 - Exonic hg19 BRCA TCGA-AR-A256-01A 127 In-Frame Inter-chr p13 80462 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ADAM2-MAVS ADAM2 chr8 39626949 - MAVS chr20 3835387 - Exonic hg19 BRCA TCGA-AR-A256-01A 127 Out-of-Frame Inter-chr p13 80463 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MYRF-FADS2 MYRF chr11 61554279 - FADS2 chr11 61621102 + Exonic hg19 BRCA TCGA-AR-A256-01A 153 Out-of-Frame Intra-chr q12.2 Transcription factor q12.2 80464 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MYCBP2-NDFIP2 MYCBP2 chr13 77641767 - NDFIP2 chr13 80113909 - Exonic hg19 BRCA TCGA-D8-A1XK-01A 123 Out-of-Frame Intra-chr q22.3 q31.1 80465 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MYCBP2-NDFIP2 MYCBP2 chr13 77649652 - NDFIP2 chr13 80113909 - Exonic hg19 BRCA TCGA-D8-A1XK-01A 116 Out-of-Frame Intra-chr q22.3 q31.1 80466 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-D8-A1XK-01A 167 Out-of-Frame Intra-chr q11.22 80467 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BCAT1-GYG2 BCAT1 chr12 24983722 + GYG2 chrX 2799092 + Exonic hg19 BRCA TCGA-BH-A0DG-01A 129 Out-of-Frame Inter-chr p12.1 p22.33 80468 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ITGB6-RBMS1 ITGB6 chr2 161030484 - RBMS1 chr2 161159997 - Exonic hg19 BRCA TCGA-D8-A1XK-01A 166 In-Frame Intra-chr q24.2 q24.2 Seq+ 80469 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EIF2S2-DEFB123 EIF2S2 chr20 32699901 - DEFB123 chr20 30037831 + Exonic hg19 BRCA TCGA-C8-A273-01A 311 Out-of-Frame Intra-chr q11.22 q11.21 Seq+ 80470 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DDB1-TMEM258 DDB1 chr11 61076454 - TMEM258 chr11 61556706 - Exonic hg19 BRCA TCGA-AR-A256-01A 181 Out-of-Frame Intra-chr q12.2 q12.2 Seq+ 80471 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR12-ASB7 WDR12 chr2 203747458 + ASB7 chr15 101185681 + Exonic hg19 BRCA TCGA-AR-A256-01A 199 Out-of-Frame Inter-chr q33.2 q26.3 80472 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SEC61A2-MAPK14 SEC61A2 chr10 12209809 + MAPK14 chr6 36059929 + Exonic hg19 BRCA TCGA-AR-A256-01A 108 In-Frame Inter-chr p14 p21.31 80473 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-B6-A0RT-01A 1075 Out-of-Frame Intra-chr q11.22 80474 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FGF10-BRCAT54 FGF10 chr5 44388459 - BRCAT54 chr5 44745509 - Exonic hg19 BRCA TCGA-AR-A24L-01A 1704 Out-of-Frame Intra-chr p12 80475 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FGF10-BRCAT54 FGF10 chr5 44388459 - BRCAT54 chr5 44746139 - Exonic hg19 BRCA TCGA-AR-A24L-01A 1704 Out-of-Frame Intra-chr p12 80476 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BCL2-GRIK5 BCL2 chr18 60924775 - GRIK5 chr19 42563500 + Exonic hg19 BRCA TCGA-E2-A15E-06A 330 Out-of-Frame Inter-chr q21.33 Oncogene q13.2 80477 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ETFB-LIM2 ETFB chr19 51857403 - LIM2 chr19 51883892 - Exonic hg19 BRCA TCGA-B6-A0RT-01A 101 Out-of-Frame Intra-chr q13.41 q13.41 Seq+ 80478 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SEMA4C-FAM178B SEMA4C chr2 97530721 - FAM178B chr2 97559185 - Exonic hg19 BRCA TCGA-E2-A14R-01A 1896 Out-of-Frame Intra-chr q11.2 q11.2 Seq+ 80479 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SEMA4C-FAM178B SEMA4C chr2 97530730 - FAM178B chr2 97544229 - Exonic hg19 BRCA TCGA-E2-A14R-01A 316 In-Frame Intra-chr q11.2 q11.2 Seq+ 80480 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ICMT-CAMTA1 ICMT chr1 6291961 - CAMTA1 chr1 7252436 - Exonic hg19 BRCA TCGA-BH-A0BZ-01A 106 Out-of-Frame Intra-chr p36.31 p36.31 Tumor suppressor gene Transcription factor 80481 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RARA-SKAP1 RARA chr17 38487647 + SKAP1 chr17 46214698 - Exonic hg19 BRCA TCGA-B6-A0IN-01A 283 Out-of-Frame Intra-chr q21.2 Oncogene Transcription factor q21.32 Seq+ 80482 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-BH-A1FC-01A 1423 Out-of-Frame Intra-chr q11.22 80483 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTBP2-KAZN PTBP2 chr1 97189149 + KAZN chr1 15361244 + Exonic hg19 BRCA TCGA-BH-A1FC-01A 105 Out-of-Frame Intra-chr p21.3 p36.21 Seq+ 80484 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RNF11-TMEM61 RNF11 chr1 51702550 + TMEM61 chr1 55457508 + Exonic hg19 BRCA TCGA-BH-A1FC-01A 126 Out-of-Frame Intra-chr p32.3 p32.3 Seq+ 80485 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC39A3-PLPP2 SLC39A3 chr19 2737045 - PLPP2 chr19 288170 - Exonic hg19 BRCA TCGA-A7-A13E-01A 118 Out-of-Frame Intra-chr p13.3 p13.3 Seq+ 80486 ChimerSeq Tophat-Fusion TCGA_RNA-Seq INSR-PRKCSH INSR chr19 7171405 - PRKCSH chr19 11552171 - Exonic hg19 BRCA TCGA-C8-A12L-01A 164 Out-of-Frame Intra-chr p13.2 TK:InsR p13.2 80487 ChimerSeq Tophat-Fusion TCGA_RNA-Seq INSR-PRKCSH INSR chr19 7174537 - PRKCSH chr19 11552171 - Exonic hg19 BRCA TCGA-C8-A12L-01A 165 Out-of-Frame Intra-chr p13.2 TK:InsR p13.2 80488 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CLU-COL1A1 CLU chr8 27462579 + COL1A1 chr17 48266613 - Exonic hg19 BRCA TCGA-A1-A0SH-01A 100 Out-of-Frame Inter-chr p21.1 Tumor suppressor gene q21.33 Oncogene 80489 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OPCML-NTM OPCML chr11 132812824 - NTM chr11 132016171 + Exonic hg19 BRCA TCGA-E9-A1NG-01A 150 Out-of-Frame Intra-chr q25 Tumor suppressor gene q25 Seq+ 80490 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMEM14C-PAK1IP1 TMEM14C chr6 10725269 + PAK1IP1 chr6 10709185 + Exonic hg19 BRCA TCGA-EW-A3U0-01A 100 Out-of-Frame Intra-chr p24.2 p24.2 Seq+ 80491 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FZR1-MFSD12 FZR1 chr19 3524189 - MFSD12 chr19 3545107 - Exonic hg19 BRCA TCGA-C8-A12L-01A 105 Out-of-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 80492 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FZR1-MFSD12 FZR1 chr19 3524571 - MFSD12 chr19 3544936 - Exonic hg19 BRCA TCGA-C8-A12L-01A 105 Out-of-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 80493 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CPT1A-CHKA CPT1A chr11 68529002 - CHKA chr11 67821513 - Exonic hg19 BRCA TCGA-A8-A08G-01A 343 In-Frame Intra-chr q13.3 q13.2 Seq+ 80494 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLC39A11-ITGB4 SLC39A11 chr17 71073900 - ITGB4 chr17 73727288 - Exonic hg19 BRCA TCGA-AC-A23H-01A 728 Out-of-Frame Intra-chr q25.1 q25.1 80495 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CDK6-VPS50 CDK6 chr7 92295395 - VPS50 chr7 92869246 - Exonic hg19 BRCA TCGA-C8-A134-01A 117 Out-of-Frame Intra-chr q21.2 CMGC:CDK Oncogene Tumor suppressor gene q21.2 80496 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CKAP5-VMP1 CKAP5 chr11 46780472 - VMP1 chr17 57842331 + Exonic hg19 BRCA TCGA-AC-A23H-01A 105 In-Frame Inter-chr p11.2 q23.1 Seq+ 80497 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TFG-ADGRG7 TFG chr3 100438901 + ADGRG7 chr3 100348441 + Exonic hg19 BRCA TCGA-D8-A1JT-01A 246 Out-of-Frame Intra-chr q12.2 q12.2 KB Pub 80498 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KANSL1-ORMDL3 KANSL1 chr17 44144914 - ORMDL3 chr17 38080472 - Exonic hg19 BRCA TCGA-AC-A23H-01A 197 CDS-5'UTR Intra-chr q21.1 Seq+ 80499 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KANSL1-ORMDL3 KANSL1 chr17 44144914 - ORMDL3 chr17 38080477 - Exonic hg19 BRCA TCGA-AC-A23H-01A 197 CDS-5'UTR Intra-chr q21.1 Seq+ 80500 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DUSP8-DENND5A DUSP8 chr11 1585546 - DENND5A chr11 9199478 + Exonic hg19 BRCA TCGA-A8-A08G-01A 239 Out-of-Frame Intra-chr p15.4 80501 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MCUR1-S100A10 MCUR1 chr6 13800572 - S100A10 chr1 151958726 - Exonic hg19 BRCA TCGA-E9-A3QA-01A 123 Out-of-Frame Inter-chr p23 q21.3 Seq+ 80502 ChimerSeq Tophat-Fusion TCGA_RNA-Seq IPO7-RENBP IPO7 chr11 9430185 + RENBP chrX 153201028 - Exonic hg19 BRCA TCGA-A8-A08G-01A 103 Out-of-Frame Inter-chr p15.4 q28 Seq+ 80503 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RANBP10-RRP15 RANBP10 chr16 67839330 - RRP15 chr1 218504289 + Exonic hg19 BRCA TCGA-E2-A109-01A 224 Out-of-Frame Inter-chr q22.1 q41 Seq+ 80504 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KDM2A-MAP3K3 KDM2A chr11 66999430 + MAP3K3 chr17 61757470 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 534 In-Frame Inter-chr q13.2 Transcription factor q23.3 STE:STE11 Seq+ 80505 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KDM2A-MAP3K3 KDM2A chr11 66999430 + MAP3K3 chr17 61759125 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 534 Out-of-Frame Inter-chr q13.2 Transcription factor q23.3 STE:STE11 Seq+ 80506 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TBC1D23-CMSS1 TBC1D23 chr3 100002654 + CMSS1 chr3 99890682 + Exonic hg19 BRCA TCGA-AO-A129-01A 200 Out-of-Frame Intra-chr q12.1 q12.1 Seq+ 80507 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TRPS1-LINC00536 TRPS1 chr8 116599227 - LINC00536 chr8 117142504 - Exonic hg19 BRCA TCGA-D8-A140-01A 129 CDS-3'UTR Intra-chr q23.3 Transcription factor q23.3 Seq+ 80508 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TUBD1-CDK12 TUBD1 chr17 57943969 - CDK12 chr17 37667781 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 110 In-Frame Intra-chr q23.1 q12 Oncogene Seq+ 80509 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TUBD1-CDK12 TUBD1 chr17 57951899 - CDK12 chr17 37667781 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 131 Out-of-Frame Intra-chr q23.1 q12 Oncogene Seq+ 80510 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NCAPH2-TYMP NCAPH2 chr22 50960739 - TYMP chr22 50965112 - Exonic hg19 BRCA TCGA-AO-A129-01A 157 Out-of-Frame Intra-chr q13.33 q13.33 80511 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NCAPH2-TYMP NCAPH2 chr22 50960771 - TYMP chr22 50964565 - Exonic hg19 BRCA TCGA-AO-A129-01A 157 Out-of-Frame Intra-chr q13.33 q13.33 80512 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-AR-A254-01A 100 Out-of-Frame Intra-chr q11.22 80513 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-BH-A1FR-11B 213 Out-of-Frame Intra-chr q11.22 80514 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERBB2-SLC29A3 ERBB2 chr17 37883255 + SLC29A3 chr10 73121710 + Exonic hg19 BRCA TCGA-AR-A254-01A 1078 Out-of-Frame Inter-chr q12 Oncogene q22.1 Seq+ 80515 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DDX42-RPS6KB1 DDX42 chr17 61882534 + RPS6KB1 chr17 57987922 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 105 In-Frame Intra-chr q23.3 q23.1 Oncogene Seq+ 80516 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DDX42-RPS6KB1 DDX42 chr17 61882815 + RPS6KB1 chr17 57989481 + Exonic hg19 BRCA TCGA-A1-A0SN-01A 105 Out-of-Frame Intra-chr q23.3 q23.1 Oncogene Seq+ 80517 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LINC01111-MTDH LINC01111 chr8 77396309 + MTDH chr8 98657114 - Exonic hg19 BRCA TCGA-E2-A109-01A 136 Out-of-Frame Intra-chr q21.13 q22.1 80518 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FBXL20-SOCS7 FBXL20 chr17 37557613 - SOCS7 chr17 36551561 + Exonic hg19 BRCA TCGA-AR-A254-01A 111 Out-of-Frame Intra-chr q12 q12 Seq+ 80519 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CPSF4-SARNP CPSF4 chr7 99040869 - SARNP chr12 56194367 - Exonic hg19 BRCA TCGA-BH-A6R8-01A 127 Out-of-Frame Inter-chr q22.1 q13.2 80520 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-FTO ACTN4 chr19 39138546 + FTO chr16 53844051 + Exonic hg19 BRCA TCGA-E2-A150-01A 177 In-Frame Inter-chr q12.2 Seq+ 80521 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-E9-A1NE-01A 319 Out-of-Frame Intra-chr q11.22 80522 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677323 + IGLL5 chr22 23235959 + Exonic hg19 BRCA TCGA-GM-A3XL-01A 749 Out-of-Frame Intra-chr q11.22 80523 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CANX-LINC01082 CANX chr5 179147560 + LINC01082 chr16 86233117 + Exonic hg19 BRCA TCGA-UU-A93S-01A 765 Out-of-Frame Inter-chr q24.1 80524 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SHROOM3-GRSF1 SHROOM3 chr4 77507621 + GRSF1 chr4 71702030 - Exonic hg19 BRCA TCGA-E2-A1IO-01A 109 Out-of-Frame Intra-chr q21.1 q13.3 Seq+ 80525 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MBTPS1-ATP2C2 MBTPS1 chr16 84095212 - ATP2C2 chr16 84433347 - Exonic hg19 BRCA TCGA-GM-A3XL-01A 165 Out-of-Frame Intra-chr q24.1 q24.1 80526 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SPIDR-NSFL1C SPIDR chr8 48424444 + NSFL1C chr20 1435753 + Exonic hg19 BRCA TCGA-Z7-A8R5-01A 147 Out-of-Frame Inter-chr q11.21 p13 80527 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DFNB31-SERF2 DFNB31 chr9 117253950 - SERF2 chr15 44085934 - Exonic hg19 BRCA TCGA-C8-A12X-01A 148 Out-of-Frame Inter-chr q15.3 80528 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EFHD1-EIF4E2 EFHD1 chr2 233537152 + EIF4E2 chr2 233428956 + Exonic hg19 BRCA TCGA-AO-A0JE-01A 473 In-Frame Intra-chr q37.1 q37.1 Seq+ 80529 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-D8-A13Z-01A 204 Out-of-Frame Intra-chr q11.22 80530 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PDE10A-POLB PDE10A chr6 165989899 - POLB chr8 42229080 + Exonic hg19 BRCA TCGA-D8-A13Z-01A 133 In-Frame Inter-chr q27 p11.21 Seq+ 80531 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MFF-PDE6A MFF chr2 228212099 + PDE6A chr5 149311876 - Exonic hg19 BRCA TCGA-A7-A26E-01A 125 Out-of-Frame Inter-chr q36.3 q32 80532 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ASAH1-IKBKB ASAH1 chr8 17940582 - IKBKB chr8 42147790 - Exonic hg19 BRCA TCGA-A7-A2KD-01A 111 In-Frame Intra-chr p22 p11.21 Oncogene 80533 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ASAH1-IKBKB ASAH1 chr8 17941489 - IKBKB chr8 42144850 - Exonic hg19 BRCA TCGA-A7-A2KD-01A 111 In-Frame Intra-chr p22 p11.21 Oncogene 80534 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GSE1-METTL23 GSE1 chr16 85647003 + METTL23 chr17 74729059 + Exonic hg19 BRCA TCGA-A7-A2KD-01A 277 Out-of-Frame Inter-chr q24.1 q25.1 Seq+ 80535 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GSE1-METTL23 GSE1 chr16 85647003 + METTL23 chr17 74729374 + Exonic hg19 BRCA TCGA-A7-A2KD-01A 277 Out-of-Frame Inter-chr q24.1 q25.1 Seq+ 80536 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF136-RNASEH2A ZNF136 chr19 12274020 + RNASEH2A chr19 12917821 + Exonic hg19 BRCA TCGA-A7-A2KD-01A 181 Out-of-Frame Intra-chr p13.2 Transcription factor p13.13 Seq+ 80537 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-D8-A27K-01A 156 Out-of-Frame Intra-chr q11.22 80538 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677324 + IGLL5 chr22 23235963 + Exonic hg19 BRCA TCGA-AR-A0TS-01A 1181 Out-of-Frame Intra-chr q11.22 80539 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CASP3-PRIMPOL CASP3 chr4 185559554 - PRIMPOL chr4 185587980 - Exonic hg19 BRCA TCGA-D8-A27R-01A 169 Out-of-Frame Intra-chr q35.1 q35.1 80540 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ITSN2-NCOA1 ITSN2 chr2 24535080 - NCOA1 chr2 24914571 - Exonic hg19 BRCA TCGA-C8-A26Y-01A 105 Out-of-Frame Intra-chr p23.3 p23.3 Oncogene Transcription factor 80541 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CD9-LOC100505666 CD9 chr12 6333383 + LOC100505666 chr1 155030204 - Exonic hg19 BRCA TCGA-B6-A0RE-01A 108 CDS-5'UTR Inter-chr p13.31 Seq+ 80542 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ITGA3-BCAS3 ITGA3 chr17 48148293 + BCAS3 chr17 58980011 - Exonic hg19 BRCA TCGA-AR-A250-01A 625 Out-of-Frame Intra-chr q21.33 q23.2 80543 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PSPC1-LINC00544 PSPC1 chr13 20325351 - LINC00544 chr13 30513714 - Exonic hg19 BRCA TCGA-AR-A250-01A 159 Out-of-Frame Intra-chr q12.11 q12.3 80544 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PSPC1-LINC00544 PSPC1 chr13 20325410 - LINC00544 chr13 30510694 - Exonic hg19 BRCA TCGA-AR-A250-01A 191 Out-of-Frame Intra-chr q12.11 q12.3 80545 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GFM1-MLF1 GFM1 chr3 158384174 + MLF1 chr3 158310222 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 140 In-Frame Intra-chr q25.32 q25.32 Seq+ 80546 ChimerSeq Tophat-Fusion TCGA_RNA-Seq THSD4-LRRC49 THSD4 chr15 71447270 + LRRC49 chr15 71329517 + Exonic hg19 BRCA TCGA-GI-A2C8-01A 143 Out-of-Frame Intra-chr q23 q23 Seq+ 80547 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235963 + Exonic hg19 BRCA TCGA-B6-A0WS-01A 632 Out-of-Frame Intra-chr q11.22 80548 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BRWD1-LINC00114 BRWD1 chr21 40684766 - LINC00114 chr21 40112337 - Exonic hg19 BRCA TCGA-GI-A2C8-01A 124 CDS-3'UTR Intra-chr q22.2 q22.2 Seq+ 80549 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NSMCE4A-ATE1 NSMCE4A chr10 123724800 - ATE1 chr10 123503372 - Exonic hg19 BRCA TCGA-D8-A142-01A 1848 Out-of-Frame Intra-chr q26.13 q26.13 Seq+ 80550 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NSMCE4A-ATE1 NSMCE4A chr10 123727169 - ATE1 chr10 123503372 - Exonic hg19 BRCA TCGA-D8-A142-01A 1848 Out-of-Frame Intra-chr q26.13 q26.13 Seq+ 80551 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EFHD1-EIF4E2 EFHD1 chr2 233537152 + EIF4E2 chr2 233431538 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 371 In-Frame Intra-chr q37.1 q37.1 Seq+ 80552 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ARFGEF3-LOC100507406 ARFGEF3 chr6 138613189 + LOC100507406 chr6 138051733 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 115 Out-of-Frame Intra-chr q23.3 80553 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ARFGEF3-LOC100507406 ARFGEF3 chr6 138615262 + LOC100507406 chr6 138051733 - Exonic hg19 BRCA TCGA-C8-A12Q-01A 115 Out-of-Frame Intra-chr q23.3 80554 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KLHL21-TNFRSF9 KLHL21 chr1 6655544 - TNFRSF9 chr1 7993240 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 131 Out-of-Frame Intra-chr p36.31 p36.23 80555 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KLHL21-TNFRSF9 KLHL21 chr1 6655544 - TNFRSF9 chr1 7993269 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 131 Out-of-Frame Intra-chr p36.31 p36.23 80556 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MYO1D-TEX2 MYO1D chr17 31203795 - TEX2 chr17 62248558 - Exonic hg19 BRCA TCGA-GI-A2C8-01A 181 Out-of-Frame Intra-chr q11.2 q23.3 Seq+ 80557 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PLEKHF2-NDUFAF6 PLEKHF2 chr8 96146257 + NDUFAF6 chr8 96044222 + Exonic hg19 BRCA TCGA-C8-A12Q-01A 442 Out-of-Frame Intra-chr q22.1 q22.1 Seq+ 80558 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ATP2A2-RRP1 ATP2A2 chr12 110781238 + RRP1 chr21 45211230 + Exonic hg19 BRCA TCGA-B6-A0RH-01A 103 In-Frame Inter-chr q24.11 q22.3 Seq+ 80559 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-AR-A252-01A 942 Out-of-Frame Intra-chr q11.22 80560 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ARFGEF2-BRWD1 ARFGEF2 chr20 47590183 + BRWD1 chr21 40622721 + Exonic hg19 BRCA TCGA-AR-A252-01A 2032 Out-of-Frame Inter-chr q13.13 q22.2 80561 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ARFGEF2-BRWD1 ARFGEF2 chr20 47590236 + BRWD1 chr21 40622721 + Exonic hg19 BRCA TCGA-AR-A252-01A 2032 Out-of-Frame Inter-chr q13.13 q22.2 80562 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UBE2J2-ACAP3 UBE2J2 chr1 1203241 - ACAP3 chr1 1229578 - Exonic hg19 BRCA TCGA-OL-A66I-01A 184 Out-of-Frame Intra-chr p36.33 p36.33 Seq+ 80563 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SLF1-ZMYM2 SLF1 chr5 93977098 + ZMYM2 chr13 20641529 - Exonic hg19 BRCA TCGA-AC-A3OD-01B 234 Out-of-Frame Inter-chr q15 q12.11 80564 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EIF4A2-FAM149B1 EIF4A2 chr3 186502414 + FAM149B1 chr10 74959593 + Exonic hg19 BRCA TCGA-AC-A2BK-01A 120 In-Frame Inter-chr q27.3 q22.2 80565 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRB7-PGAP3 GRB7 chr17 37898708 + PGAP3 chr17 37842271 - Exonic hg19 BRCA TCGA-BH-A202-01A 226 Out-of-Frame Intra-chr q12 q12 Oncogene Seq+ 80566 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRB7-PGAP3 GRB7 chr17 37898968 + PGAP3 chr17 37842271 - Exonic hg19 BRCA TCGA-BH-A202-01A 226 Out-of-Frame Intra-chr q12 q12 Oncogene Seq+ 80567 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GRB7-PGAP3 GRB7 chr17 37899306 + PGAP3 chr17 37842271 - Exonic hg19 BRCA TCGA-BH-A202-01A 226 In-Frame Intra-chr q12 q12 Oncogene Seq+ 80568 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-BH-A0W5-01A 476 Out-of-Frame Intra-chr q11.22 80569 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-LL-A7T0-01A 488 Out-of-Frame Intra-chr q11.22 80570 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RARA-WIPF2 RARA chr17 38487647 + WIPF2 chr17 38430041 + Exonic hg19 BRCA TCGA-BH-A202-01A 203 In-Frame Intra-chr q21.2 Oncogene Transcription factor q21.2 Seq+ 80571 ChimerSeq Tophat-Fusion TCGA_RNA-Seq QARS-USP19 QARS chr3 49135624 - USP19 chr3 49150061 - Exonic hg19 BRCA TCGA-AO-A0J2-01A 140 In-Frame Intra-chr p21.31 p21.31 Seq+ 80572 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMEM65-KRT7 TMEM65 chr8 125343325 - KRT7 chr12 52641564 - Exonic hg19 BRCA TCGA-AO-A0J2-01A 317 Out-of-Frame Inter-chr q24.13 q13.13 80573 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 BRCA TCGA-D8-A27T-01A 149 Out-of-Frame Intra-chr q11.22 80574 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LUC7L3-C17orf64 LUC7L3 chr17 48814386 + C17orf64 chr17 58506722 + Exonic hg19 BRCA TCGA-BH-A18R-01A 137 Out-of-Frame Intra-chr q21.33 q23.2 Seq+ 80575 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PTPRK-HECA PTPRK chr6 128841403 - HECA chr6 139487420 + Exonic hg19 BRCA TCGA-E9-A1NA-01A 320 In-Frame Intra-chr Tumor suppressor gene q24.1 Tumor suppressor gene Seq+ 80576 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DNAJC1-LOC100507377 DNAJC1 chr10 22193450 - LOC100507377 chr12 74668732 + Exonic hg19 BRCA TCGA-LL-A5YM-01A 162 CDS-3'UTR Inter-chr p12.31 80577 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SEPT9-SLC26A11 2009_ 9_ 1_ chr17 75277635 + SLC26A11 chr17 78225186 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 148 Out-of-Frame Intra-chr q25.3 80578 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SEPT9-SLC26A11 2009_ 9_ 1_ chr17 75284291 + SLC26A11 chr17 78225186 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 160 Out-of-Frame Intra-chr q25.3 80579 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DCAF7-VMP1 DCAF7 chr17 61628175 + VMP1 chr17 57808781 + Exonic hg19 BRCA TCGA-BH-A18R-01A 430 CDS-5'UTR Intra-chr q23.3 q23.1 Seq+ 80580 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZNF232-RABEP1 ZNF232 chr17 5014633 - RABEP1 chr17 5276748 - Exonic hg19 BRCA TCGA-BH-A0DK-01A 130 In-Frame Intra-chr p13.2 Transcription factor p13.2 80581 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPRD1A-ELP2 RPRD1A chr18 33580258 - ELP2 chr18 33710033 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 2442 Out-of-Frame Intra-chr q12.2 q12.2 80582 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPRD1A-SLC39A6 RPRD1A chr18 33606862 - SLC39A6 chr18 33702232 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 2197 In-Frame Intra-chr q12.2 q12.2 Seq+ 80583 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SEMA4C-AFF3 SEMA4C chr2 97526697 - AFF3 chr2 100274207 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 796 In-Frame Intra-chr q11.2 q11.2 Oncogene Seq+ 80584 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SEMA4C-AFF3 SEMA4C chr2 97527315 - AFF3 chr2 100266127 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 822 Out-of-Frame Intra-chr q11.2 q11.2 Oncogene Seq+ 80585 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LIG3-CACNB1 LIG3 chr17 33326874 + CACNB1 chr17 37333456 + Exonic hg19 BRCA TCGA-BH-A18R-01A 142 In-Frame Intra-chr q12 Tumor suppressor gene q12 80586 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LIG3-CACNB1 LIG3 chr17 33328421 + CACNB1 chr17 37333456 + Exonic hg19 BRCA TCGA-BH-A18R-01A 142 In-Frame Intra-chr q12 Tumor suppressor gene q12 80587 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LIG3-CACNB1 LIG3 chr17 33329122 + CACNB1 chr17 37333456 + Exonic hg19 BRCA TCGA-BH-A18R-01A 142 Out-of-Frame Intra-chr q12 Tumor suppressor gene q12 80588 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CCT8-LINC00189 CCT8 chr21 30437288 - LINC00189 chr21 30600925 - Exonic hg19 BRCA TCGA-LL-A5YM-01A 143 CDS-5'UTR Intra-chr q21.3 q21.3 80589 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LIG1-NUCB1 LIG1 chr19 48660270 - NUCB1 chr19 49414430 - Exonic hg19 BRCA TCGA-E9-A1NA-01A 102 In-Frame Intra-chr q13.33 Tumor suppressor gene q13.33 80590 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SEC61A2-MAPK14 SEC61A2 chr10 12209809 + MAPK14 chr6 36059929 + Exonic hg19 BRCA TCGA-AR-A251-01A 210 In-Frame Inter-chr p14 p21.31 80591 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CDH1-VPS50 CDH1 chr16 68857528 + VPS50 chr7 92952922 + Exonic hg19 BRCA TCGA-AO-A12E-01A 333 Out-of-Frame Inter-chr q22.1 Oncogene Tumor suppressor gene q21.2 Seq+ 80592 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SPAG5-BLMH SPAG5 chr17 26925527 - BLMH chr17 28576185 - Exonic hg19 BRCA TCGA-A2-A25B-01A 110 Out-of-Frame Intra-chr q11.2 q11.2 Seq+ 80593 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KAT6B-CCDC172 KAT6B chr10 76741685 + CCDC172 chr10 118100245 + Exonic hg19 BRCA TCGA-AQ-A04L-01B 530 Out-of-Frame Intra-chr Oncogene q25.3 Seq+ 80594 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CHAF1A-RPL36 CHAF1A chr19 4439504 + RPL36 chr19 5690610 - Exonic hg19 BRCA TCGA-BH-A1FE-01A 193 Out-of-Frame Intra-chr p13.3 p13.3 80595 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FAM129B-STXBP1 FAM129B chr9 130285957 - STXBP1 chr9 130416036 - Exonic hg19 BRCA TCGA-A2-A25B-01A 101 Out-of-Frame Intra-chr q34.11 q34.11 80596 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FAM129B-STXBP1 FAM129B chr9 130285957 - STXBP1 chr9 130416280 - Exonic hg19 BRCA TCGA-A2-A25B-01A 101 Out-of-Frame Intra-chr q34.11 q34.11 80597 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HDAC1-MARK1 HDAC1 chr1 32796286 + MARK1 chr1 220800187 + Exonic hg19 BRCA TCGA-A2-A25B-01A 205 In-Frame Intra-chr p35.2 Tumor suppressor gene q41 CAMK:CAMKL Oncogene 80598 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TCF3-JAK2 TCF3 chr19 1615718 - JAK2 chr9 5112398 + Exonic hg19 BRCA TCGA-B6-A0WZ-01A 143 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p24.1 TK:JakA Oncogene 80599 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GATA5-PRPF6 GATA5 chr20 61049183 + PRPF6 chr20 62632774 + Exonic hg19 BRCA TCGA-BH-A0HL-01A 305 In-Frame Intra-chr q13.33 Tumor suppressor gene Transcription factor q13.33 80600 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UBAC2-LOC101927437 UBAC2 chr13 99890807 + LOC101927437 chr13 100543571 + Exonic hg19 BRCA TCGA-D8-A1JK-01A 276 Out-of-Frame Intra-chr q32.3 80601 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KXD1-TMEM59L KXD1 chr19 18675830 + TMEM59L chr19 18726111 - Exonic hg19 BRCA TCGA-AN-A0FD-01A 279 In-Frame Intra-chr p13.11 p13.11 80602 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SETDB2-ERH SETDB2 chr13 50042095 + ERH chr14 69847356 - Exonic hg19 BRCA TCGA-BH-A0EE-01A 383 In-Frame Inter-chr q14.2 Transcription factor q24.1 Seq+ 80603 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ASIC2-ACACA ASIC2 chr17 32233752 - ACACA chr17 35687112 + Exonic hg19 BRCA TCGA-D8-A1J9-01A 133 Out-of-Frame Intra-chr q12 80604 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMEM132E-FBXL20 TMEM132E chr17 32961452 + FBXL20 chr17 37455242 + Exonic hg19 BRCA TCGA-D8-A1J9-01A 540 Out-of-Frame Intra-chr q12 q12 80605 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANK1-IKBKB ANK1 chr8 41521604 - IKBKB chr8 42147790 - Exonic hg19 BRCA TCGA-XX-A899-01A 174 In-Frame Intra-chr p11.21 p11.21 Oncogene 80606 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANK1-IKBKB ANK1 chr8 41524554 - IKBKB chr8 42147790 - Exonic hg19 BRCA TCGA-XX-A899-01A 174 Out-of-Frame Intra-chr p11.21 p11.21 Oncogene 80607 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SHANK2-EMSY SHANK2 chr11 70507700 - EMSY chr11 76246459 - Exonic hg19 BRCA TCGA-XX-A899-01A 122 Out-of-Frame Intra-chr q13.4 q13.5 80608 ChimerSeq Tophat-Fusion TCGA_RNA-Seq UVRAG-EMSY UVRAG chr11 75610465 + EMSY chr11 76246461 - Exonic hg19 BRCA TCGA-XX-A899-01A 103 Out-of-Frame Intra-chr q13.5 Tumor suppressor gene q13.5 Seq+ 80609 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KAT6A-ADAM5 KAT6A chr8 41905895 - ADAM5 chr8 39258851 + Exonic hg19 BRCA TCGA-A7-A0D9-01A 988 Out-of-Frame Intra-chr p11.21 Oncogene p11.22 Seq+ 80610 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KAT6A-ADAM5 KAT6A chr8 41906690 - ADAM5 chr8 39258848 + Exonic hg19 BRCA TCGA-A7-A0D9-01A 988 Out-of-Frame Intra-chr p11.21 Oncogene p11.22 Seq+ 80611 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0319L-PHC2 KIAA0319L chr1 35907846 - PHC2 chr1 33790619 - Exonic hg19 BRCA TCGA-D8-A1XJ-01A 118 Out-of-Frame Intra-chr p34.3 p35.1 Seq+ 80612 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0319L-PHC2 KIAA0319L chr1 35907846 - PHC2 chr1 33793027 - Exonic hg19 BRCA TCGA-D8-A1XJ-01A 118 In-Frame Intra-chr p34.3 p35.1 Seq+ 80613 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TADA2A-PSMD3 TADA2A chr17 35771476 + PSMD3 chr17 38150652 - Exonic hg19 BRCA TCGA-D8-A1XJ-01A 374 Out-of-Frame Intra-chr q12 q21.1 80614 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SOCS7-ARHGAP23 SOCS7 chr17 36517657 + ARHGAP23 chr17 36587074 - Exonic hg19 BRCA TCGA-D8-A1XJ-01A 2514 Out-of-Frame Intra-chr q12 q12 80615 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WHSC1L1-RAB11FIP1 WHSC1L1 chr8 38153313 - RAB11FIP1 chr8 37735068 - Exonic hg19 BRCA TCGA-A7-A0D9-01A 371 In-Frame Intra-chr p11.23 Tumor suppressor gene p11.23 Seq+ 80616 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677323 + IGLL5 chr22 23235959 + Exonic hg19 BRCA TCGA-A8-A08R-01A 356 Out-of-Frame Intra-chr q11.22 80617 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKAP8-VMP1 AKAP8 chr19 15469777 - VMP1 chr17 57842331 + Exonic hg19 BRCA TCGA-A8-A07L-01A 101 In-Frame Inter-chr p13.12 Transcription factor q23.1 Seq+ 80618 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PLXDC1-ERBB2 PLXDC1 chr17 37306531 - ERBB2 chr17 37868700 - Exonic hg19 BRCA TCGA-D8-A1XJ-01A 381 Out-of-Frame Intra-chr q12 q12 Oncogene 80619 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CCDC117-HSCB CCDC117 chr22 29179632 + HSCB chr22 29147228 + Exonic hg19 BRCA TCGA-A8-A07L-01A 130 Out-of-Frame Intra-chr q12.1 q12.1 Seq+ 80620 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DPP3-LOC101929622 DPP3 chr11 66261103 + LOC101929622 chr8 37584677 + Exonic hg19 BRCA TCGA-AO-A1KT-01A 114 Out-of-Frame Inter-chr q13.2 80621 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GNAS-PVRL2 GNAS chr20 57470738 + PVRL2 chr19 45385467 + Exonic hg19 BRCA TCGA-D8-A1XJ-01A 167 Out-of-Frame Inter-chr q13.32 Oncogene Seq+ 80622 ChimerSeq Tophat-Fusion TCGA_RNA-Seq STARD3-C17orf98 STARD3 chr17 37810002 + C17orf98 chr17 36991598 - Exonic hg19 BRCA TCGA-D8-A1XJ-01A 170 Out-of-Frame Intra-chr q12 q12 Seq+ 80623 ChimerSeq Tophat-Fusion TCGA_RNA-Seq STARD3-C17orf98 STARD3 chr17 37810002 + C17orf98 chr17 36993492 - Exonic hg19 BRCA TCGA-D8-A1XJ-01A 170 In-Frame Intra-chr q12 q12 Seq+ 80624 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAB11FIP1-BBS1 RAB11FIP1 chr8 37747981 - BBS1 chr11 66294277 - Exonic hg19 BRCA TCGA-AO-A1KT-01A 189 Out-of-Frame Inter-chr p11.23 q13.2 80625 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAB11FIP1-BBS1 RAB11FIP1 chr8 37748047 - BBS1 chr11 66294277 - Exonic hg19 BRCA TCGA-AO-A1KT-01A 189 Out-of-Frame Inter-chr p11.23 q13.2 80626 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAB11FIP1-BBS1 RAB11FIP1 chr8 37756588 - BBS1 chr11 66288936 - Exonic hg19 BRCA TCGA-AO-A1KT-01A 180 Out-of-Frame Inter-chr p11.23 q13.2 80627 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAB11FIP1-BBS1 RAB11FIP1 chr8 37756588 - BBS1 chr11 66294476 - Exonic hg19 BRCA TCGA-AO-A1KT-01A 180 In-Frame Inter-chr p11.23 q13.2 80628 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WISP3-PSMB1 WISP3 chr6 112389527 + PSMB1 chr6 170852688 + Exonic hg19 BRCA TCGA-E2-A1LE-01A 201 Out-of-Frame Intra-chr q21 Tumor suppressor gene 80629 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EMSY-INTS4 EMSY chr11 76175064 + INTS4 chr11 77666987 + Exonic hg19 BRCA TCGA-AO-A1KT-01A 209 Out-of-Frame Intra-chr q13.5 q14.1 80630 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EMSY-INTS4 EMSY chr11 76184667 + INTS4 chr11 77666987 + Exonic hg19 BRCA TCGA-AO-A1KT-01A 195 Out-of-Frame Intra-chr q13.5 q14.1 80631 ChimerSeq Tophat-Fusion TCGA_RNA-Seq C11orf80-INTS4 C11orf80 chr11 66556161 + INTS4 chr11 77666987 + Exonic hg19 BRCA TCGA-AO-A1KT-01A 210 In-Frame Intra-chr q13.2 q14.1 80632 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR12-ASB7 WDR12 chr2 203747458 + ASB7 chr15 101185681 + Exonic hg19 BRCA TCGA-A8-A07L-01A 103 Out-of-Frame Inter-chr q33.2 q26.3 80633 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-77-A5GB-01B 214 Out-of-Frame Intra-chr q11.22 80634 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677323 + IGLL5 chr22 23235959 + Exonic hg19 LUSC TCGA-63-7020-01A 883 Out-of-Frame Intra-chr q11.22 80635 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677324 + IGLL5 chr22 23235963 + Exonic hg19 LUSC TCGA-92-8063-01A 734 Out-of-Frame Intra-chr q11.22 80636 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GMPS-PQLC2L GMPS chr3 155588685 + PQLC2L chr3 157271018 + Exonic hg19 LUSC TCGA-66-2766-01A 567 Out-of-Frame Intra-chr q25.31 q25.32 Seq+ 80637 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA0319L-CLSPN KIAA0319L chr1 36019950 - CLSPN chr1 36204994 + Exonic hg19 LUSC TCGA-66-2737-01A 149 Out-of-Frame Intra-chr p34.3 p34.3 Seq+ 80638 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PLD3-DGKK PLD3 chr19 40877779 + DGKK chrX 50196671 + Exonic hg19 LUSC TCGA-22-4591-01A 144 Out-of-Frame Inter-chr q13.2 p11.22 80639 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PLD3-DGKK PLD3 chr19 40877779 + DGKK chrX 50196766 + Exonic hg19 LUSC TCGA-22-4591-01A 144 In-Frame Inter-chr q13.2 p11.22 80640 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PLD3-DGKK PLD3 chr19 40879956 + DGKK chrX 50195995 + Exonic hg19 LUSC TCGA-22-4591-01A 144 In-Frame Inter-chr q13.2 p11.22 80641 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RRP12-EXOSC1 RRP12 chr10 99160061 - EXOSC1 chr10 99197506 - Exonic hg19 LUSC TCGA-66-2766-01A 121 In-Frame Intra-chr q24.1 q24.1 Seq+ 80642 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ESYT2-VIPR2 ESYT2 chr7 158580694 - VIPR2 chr7 158852276 + Exonic hg19 LUSC TCGA-33-A4WN-01A 217 Out-of-Frame Intra-chr q36.3 q36.3 Seq+ 80643 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235962 + Exonic hg19 LUSC TCGA-18-3406-01A 1391 Out-of-Frame Intra-chr q11.22 80644 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-18-3406-01A 1391 Out-of-Frame Intra-chr q11.22 80645 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-22-5478-11A 212 Out-of-Frame Intra-chr q11.22 80646 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SKIL-FNDC3B SKIL chr3 170079216 + FNDC3B chr3 172064116 + Exonic hg19 LUSC TCGA-56-7580-01A 559 In-Frame Intra-chr q26.2 Tumor suppressor gene Transcription factor q26.31 Seq+ 80647 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SKIL-FNDC3B SKIL chr3 170079216 + FNDC3B chr3 172065001 + Exonic hg19 LUSC TCGA-56-7580-01A 559 In-Frame Intra-chr q26.2 Tumor suppressor gene Transcription factor q26.31 Seq+ 80648 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ATP11B-MCF2L2 ATP11B chr3 182547539 + MCF2L2 chr3 182924246 + Exonic hg19 LUSC TCGA-56-A4BY-01A 598 Out-of-Frame Intra-chr q26.33 Oncogene q27.1 Seq+ 80649 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ATP11B-MCF2L2 ATP11B chr3 182547539 + MCF2L2 chr3 182926005 + Exonic hg19 LUSC TCGA-56-A4BY-01A 598 In-Frame Intra-chr q26.33 Oncogene q27.1 Seq+ 80650 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ATP11B-MCF2L2 ATP11B chr3 182547539 + MCF2L2 chr3 182932061 + Exonic hg19 LUSC TCGA-56-A4BY-01A 597 Out-of-Frame Intra-chr q26.33 Oncogene q27.1 Seq+ 80651 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ATP11B-KLHL6 ATP11B chr3 182547539 + KLHL6 chr3 183269840 + Exonic hg19 LUSC TCGA-56-A4BY-01A 159 Out-of-Frame Intra-chr q26.33 Oncogene q27.1 80652 ChimerSeq Tophat-Fusion TCGA_RNA-Seq YEATS2-ATP11B YEATS2 chr3 183495487 + ATP11B chr3 182590143 + Exonic hg19 LUSC TCGA-56-A4BY-01A 971 In-Frame Intra-chr q27.1 q26.33 Oncogene Seq+ 80653 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CSMD1-DOCK5 CSMD1 chr8 4812531 - DOCK5 chr8 25101271 - Exonic hg19 LUSC TCGA-68-A59I-01A 165 In-Frame Intra-chr p23.2 Tumor suppressor gene p21.2 80654 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SGK223-SGCZ SGK223 chr8 8239146 - SGCZ chr8 14237082 + Exonic hg19 LUSC TCGA-66-2782-01A 136 Out-of-Frame Intra-chr p22 80655 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MCF2L2-YEATS2 MCF2L2 chr3 182993864 - YEATS2 chr3 183495487 - Exonic hg19 LUSC TCGA-56-A4BY-01A 224 Out-of-Frame Intra-chr q27.1 q27.1 80656 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MCF2L2-YEATS2 MCF2L2 chr3 182994052 - YEATS2 chr3 183495487 - Exonic hg19 LUSC TCGA-56-A4BY-01A 224 In-Frame Intra-chr q27.1 q27.1 80657 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-22-5482-11A 288 Out-of-Frame Intra-chr q11.22 80658 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677324 + IGLL5 chr22 23235963 + Exonic hg19 LUSC TCGA-94-A5I4-01A 359 Out-of-Frame Intra-chr q11.22 80659 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677324 + IGLL5 chr22 23235963 + Exonic hg19 LUSC TCGA-98-A53D-01A 197 Out-of-Frame Intra-chr q11.22 80660 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WHSC1L1-NUTM1 WHSC1L1 chr8 38184247 - NUTM1 chr15 34640169 + Exonic hg19 LUSC TCGA-60-2716-01A 146 Out-of-Frame Inter-chr p11.23 Tumor suppressor gene q14 Seq+ 80661 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FAM73A-FUBP1 FAM73A chr1 78272098 + FUBP1 chr1 78432567 + Exonic hg19 LUSC TCGA-22-5473-01A 102 Out-of-Frame Intra-chr p31.1 Oncogene 80662 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FAM73A-FUBP1 FAM73A chr1 78272098 + FUBP1 chr1 78432732 + Exonic hg19 LUSC TCGA-22-5473-01A 102 Out-of-Frame Intra-chr p31.1 Oncogene 80663 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OPCML-NTM OPCML chr11 132812824 - NTM chr11 132016171 + Exonic hg19 LUSC TCGA-22-4604-01A 126 Out-of-Frame Intra-chr q25 Tumor suppressor gene q25 Seq+ 80664 ChimerSeq Tophat-Fusion TCGA_RNA-Seq IRF6-DIEXF IRF6 chr1 209965613 - DIEXF chr1 210007360 - Exonic hg19 LUSC TCGA-22-4604-01A 160 Out-of-Frame Intra-chr q32.2 Transcription factor q32.2 80665 ChimerSeq Tophat-Fusion TCGA_RNA-Seq IRF6-DIEXF IRF6 chr1 209965613 - DIEXF chr1 210010798 - Exonic hg19 LUSC TCGA-22-4604-01A 160 Out-of-Frame Intra-chr q32.2 Transcription factor q32.2 80666 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-68-7756-01A 536 Out-of-Frame Intra-chr q11.22 80667 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677323 + IGLL5 chr22 23235959 + Exonic hg19 LUSC TCGA-37-3789-01A 164 Out-of-Frame Intra-chr q11.22 80668 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677324 + IGLL5 chr22 23235963 + Exonic hg19 LUSC TCGA-60-2715-01A 1585 Out-of-Frame Intra-chr q11.22 80669 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CELF1-MTCH2 CELF1 chr11 47494639 - MTCH2 chr11 47660602 - Exonic hg19 LUSC TCGA-43-6771-01A 159 Out-of-Frame Intra-chr p11.2 p11.2 Seq+ 80670 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HDAC1-TSSK3 HDAC1 chr1 32796558 - TSSK3 chr1 32829645 + Exonic hg19 LUSC TCGA-60-2721-01A 131 In-Frame Intra-chr p35.2 Tumor suppressor gene p35.1 CAMK:TSSK 80671 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SNX18-GPBP1 SNX18 chr5 53829991 + GPBP1 chr5 56531858 - Exonic hg19 LUSC TCGA-60-2721-01A 203 In-Frame Intra-chr q11.2 q11.2 Transcription factor 80672 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SNX18-GPBP1 SNX18 chr5 53839158 + GPBP1 chr5 56531858 - Exonic hg19 LUSC TCGA-60-2721-01A 203 Out-of-Frame Intra-chr q11.2 q11.2 Transcription factor 80673 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SNX18-GPBP1 SNX18 chr5 53839182 + GPBP1 chr5 56531858 - Exonic hg19 LUSC TCGA-60-2721-01A 203 Out-of-Frame Intra-chr q11.2 q11.2 Transcription factor 80674 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CCAT1-CASC21 CCAT1 chr8 128231054 - CASC21 chr8 128302304 - Exonic hg19 LUSC TCGA-60-2715-01A 101 Out-of-Frame Intra-chr q24.21 q24.21 80675 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LOC338694-ANO1 LOC338694 chr11 68936581 - ANO1 chr11 69978184 - Exonic hg19 LUSC TCGA-43-6771-01A 232 Out-of-Frame Intra-chr q13.3 80676 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TECR-PKN1 TECR chr19 14640522 + PKN1 chr19 14574478 + Exonic hg19 LUSC TCGA-43-7658-01A 263 In-Frame Intra-chr p13.12 p13.12 AGC:PKN Seq+ 80677 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RSRC1-ATP11B RSRC1 chr3 157910606 + ATP11B chr3 182631781 - Exonic hg19 LUSC TCGA-39-5019-01A 199 In-Frame Intra-chr q25.32 q26.33 Oncogene 80678 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OPCML-NTM OPCML chr11 132812824 - NTM chr11 132016171 + Exonic hg19 LUSC TCGA-56-7222-11A 147 Out-of-Frame Intra-chr q25 Tumor suppressor gene q25 Seq+ 80679 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-39-5024-01A 268 Out-of-Frame Intra-chr q11.22 80680 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-90-7766-01A 1709 Out-of-Frame Intra-chr q11.22 80681 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PITPNA-PRPF8 PITPNA chr17 1456297 - PRPF8 chr17 1557309 - Exonic hg19 LUSC TCGA-43-8116-01A 236 In-Frame Intra-chr p13.3 Seq+ 80682 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ANO1-FGF3 ANO1 chr11 69972300 + FGF3 chr11 69631190 - Exonic hg19 LUSC TCGA-56-8083-01A 114 Out-of-Frame Intra-chr q13.3 q13.3 Seq+ 80683 ChimerSeq Tophat-Fusion TCGA_RNA-Seq N4BP1-LOC100506083 N4BP1 chr16 48643685 - LOC100506083 chr16 70358487 + Exonic hg19 LUSC TCGA-94-A4VJ-01A 108 CDS-3'UTR Intra-chr q12.1 80684 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RPS19-CEACAM5 RPS19 chr19 42365280 + CEACAM5 chr19 42224841 + Exonic hg19 LUSC TCGA-58-8387-01A 1017 In-Frame Intra-chr q13.2 q13.2 Seq+ 80685 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-34-2600-01A 424 Out-of-Frame Intra-chr q11.22 80686 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PLEKHA2-LOC100130964 PLEKHA2 chr8 38775587 + LOC100130964 chr8 39430762 + Exonic hg19 LUSC TCGA-66-2727-01A 289 CDS-5'UTR Intra-chr p11.22 80687 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SHB-PAX5 SHB chr9 38016007 - PAX5 chr9 37020797 - Exonic hg19 LUSC TCGA-22-4609-01A 108 In-Frame Intra-chr p13.1 p13.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 80688 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 LUSC TCGA-NK-A5D1-01A 105 Out-of-Frame Intra-chr q11.22 80689 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TFG-ADGRG7 TFG chr3 100438901 + ADGRG7 chr3 100348441 + Exonic hg19 LUSC TCGA-34-5927-01A 110 Out-of-Frame Intra-chr q12.2 q12.2 KB Pub 80690 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PLXNB1-ATRIP PLXNB1 chr3 48458926 - ATRIP chr3 48499021 - Exonic hg19 LUSC TCGA-85-A53L-01A 259 Out-of-Frame Intra-chr p21.31 p21.31 80691 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HEXA-BBS4 HEXA chr15 72668060 - BBS4 chr15 72987517 + Exonic hg19 LUSC TCGA-L3-A524-01A 181 Out-of-Frame Intra-chr q23 q24.1 Seq+ 80692 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HEXA-BBS4 HEXA chr15 72668060 - BBS4 chr15 73002040 + Exonic hg19 LUSC TCGA-L3-A524-01A 472 In-Frame Intra-chr q23 q24.1 Seq+ 80693 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RBM38-FRMD4B RBM38 chr20 55968388 + FRMD4B chr3 69267529 - Exonic hg19 LUSC TCGA-L3-A524-01A 759 In-Frame Inter-chr q13.31 Tumor suppressor gene p14.1 Seq+ 80694 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TARS2-VPS45 TARS2 chr1 150464964 + VPS45 chr1 150116886 + Exonic hg19 LUSC TCGA-85-6560-01A 111 Out-of-Frame Intra-chr q21.2 q21.2 Seq+ 80695 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TARS2-VPS45 TARS2 chr1 150469103 + VPS45 chr1 150116886 + Exonic hg19 LUSC TCGA-85-6560-01A 111 Out-of-Frame Intra-chr q21.2 q21.2 Seq+ 80696 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TARS2-VPS45 TARS2 chr1 150469406 + VPS45 chr1 150113135 + Exonic hg19 LUSC TCGA-85-6560-01A 111 Out-of-Frame Intra-chr q21.2 q21.2 Seq+ 80697 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPFIA1-RBFOX2 PPFIA1 chr11 70118541 + RBFOX2 chr22 36164395 - Exonic hg19 LUSC TCGA-85-A4QQ-01A 106 In-Frame Inter-chr q13.3 Seq+ 80698 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ITLN1-LOC101928372 ITLN1 chr1 160849100 - LOC101928372 chr1 160915081 - Exonic hg19 LUSC TCGA-56-7580-11A 3260 Out-of-Frame Intra-chr q23.3 80699 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LOC100996654-EGFR LOC100996654 chr7 54850035 + EGFR chr7 55087057 - Exonic hg19 LUSC TCGA-85-8351-01A 175 Out-of-Frame Intra-chr p11.2 TK:EGFR Oncogene 80700 ChimerSeq Tophat-Fusion TCGA_RNA-Seq INADL-ELDR INADL chr1 62208226 + ELDR chr7 55306358 - Exonic hg19 LUSC TCGA-85-8351-01A 221 Out-of-Frame Inter-chr 80701 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GBAS-PSPH GBAS chr7 56032842 + PSPH chr7 56082863 - Exonic hg19 LUSC TCGA-21-A5DI-01A 340 In-Frame Intra-chr p11.2 Seq+ 80702 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GBAS-PSPH GBAS chr7 56032900 + PSPH chr7 56082864 - Exonic hg19 LUSC TCGA-21-A5DI-01A 340 Out-of-Frame Intra-chr p11.2 Seq+ 80703 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GBAS-PSPH GBAS chr7 56032982 + PSPH chr7 56082863 - Exonic hg19 LUSC TCGA-21-A5DI-01A 340 Out-of-Frame Intra-chr p11.2 Seq+ 80704 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EGFR-LINC01445 EGFR chr7 55087057 + LINC01445 chr7 54414986 + Exonic hg19 LUSC TCGA-85-8351-01A 176 Out-of-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 80705 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-33-4586-01A 153 Out-of-Frame Intra-chr q11.22 80706 ChimerSeq Tophat-Fusion TCGA_RNA-Seq C6orf132-TRERF1 C6orf132 chr6 42071567 - TRERF1 chr6 42200629 - Exonic hg19 LUSC TCGA-NC-A5HJ-01A 269 Out-of-Frame Intra-chr p21.1 p21.1 Transcription factor Seq+ 80707 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TANK-MNAT1 TANK chr2 162036271 + MNAT1 chr14 61434946 + Exonic hg19 LUSC TCGA-56-6545-01A 203 Out-of-Frame Inter-chr q24.2 Tumor suppressor gene q23.1 Seq+ 80708 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TFG-ADGRG7 TFG chr3 100438901 + ADGRG7 chr3 100348441 + Exonic hg19 LUSC TCGA-98-A538-01A 148 Out-of-Frame Intra-chr q12.2 q12.2 KB Pub 80709 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MTMR1-CD99L2 MTMR1 chrX 149924336 + CD99L2 chrX 150038018 + Exonic hg19 LUSC TCGA-77-8136-01A 126 Out-of-Frame Intra-chr q28 q28 80710 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OPCML-NTM OPCML chr11 132812824 - NTM chr11 132016171 + Exonic hg19 LUSC TCGA-43-6647-01A 107 Out-of-Frame Intra-chr q25 Tumor suppressor gene q25 Seq+ 80711 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OPCML-NTM OPCML chr11 132812824 - NTM chr11 132016171 + Exonic hg19 LUSC TCGA-56-6545-01A 110 Out-of-Frame Intra-chr q25 Tumor suppressor gene q25 Seq+ 80712 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PJA2-ADGRV1 PJA2 chr5 108745542 - ADGRV1 chr5 90449037 + Exonic hg19 LUSC TCGA-56-6545-01A 354 Out-of-Frame Intra-chr q21.3 q14.3 Seq+ 80713 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PJA2-ADGRV1 PJA2 chr5 108745543 - ADGRV1 chr5 90445845 + Exonic hg19 LUSC TCGA-56-6545-01A 354 Out-of-Frame Intra-chr q21.3 q14.3 Seq+ 80714 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-22-4599-01A 1708 Out-of-Frame Intra-chr q11.22 80715 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-51-6867-01A 187 Out-of-Frame Intra-chr q11.22 80716 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-66-2771-01A 1250 Out-of-Frame Intra-chr q11.22 80717 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677324 + IGLL5 chr22 23235963 + Exonic hg19 LUSC TCGA-39-5021-01A 2525 Out-of-Frame Intra-chr q11.22 80718 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677324 + IGLL5 chr22 23235963 + Exonic hg19 LUSC TCGA-66-2787-01A 950 Out-of-Frame Intra-chr q11.22 80719 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DLG1-WDR53 DLG1 chr3 197009549 - WDR53 chr3 196281677 - Exonic hg19 LUSC TCGA-51-6867-01A 224 In-Frame Intra-chr q29 Tumor suppressor gene q29 Seq+ 80720 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FOSL2-BRE FOSL2 chr2 28627224 + BRE chr2 28561316 + Exonic hg19 LUSC TCGA-66-2771-01A 193 Out-of-Frame Intra-chr p23.2 Transcription factor Seq+ 80721 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TYMS-YES1 TYMS chr18 662319 + YES1 chr18 732964 - Exonic hg19 LUSC TCGA-85-8353-01A 164 3'UTR-CDS Intra-chr p11.32 p11.32 Seq+ 80722 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NEMF-LINC01588 NEMF chr14 50307435 - LINC01588 chr14 50459590 - Exonic hg19 LUSC TCGA-37-3783-01A 143 Out-of-Frame Intra-chr q21.3 q21.3 80723 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NEMF-LINC01588 NEMF chr14 50312857 - LINC01588 chr14 50459590 - Exonic hg19 LUSC TCGA-37-3783-01A 153 Out-of-Frame Intra-chr q21.3 q21.3 80724 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EHBP1-COMMD1 EHBP1 chr2 62991495 + COMMD1 chr2 62362965 + Exonic hg19 LUSC TCGA-63-A5MR-01A 186 In-Frame Intra-chr p15 p15 Seq+ 80725 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KPNA1-P3H2 KPNA1 chr3 122186168 - P3H2 chr3 189706554 + Exonic hg19 LUSC TCGA-51-6867-01A 114 Out-of-Frame Intra-chr q21.1 q28 80726 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KPNA1-P3H2 KPNA1 chr3 122186168 - P3H2 chr3 189709362 + Exonic hg19 LUSC TCGA-51-6867-01A 114 Out-of-Frame Intra-chr q21.1 q28 80727 ChimerSeq Tophat-Fusion TCGA_RNA-Seq YEATS2-SCHIP1 YEATS2 chr3 183526957 + SCHIP1 chr3 159140277 + Exonic hg19 LUSC TCGA-34-8456-01A 1605 In-Frame Intra-chr q27.1 q25.33 80728 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TFG-ADGRG7 TFG chr3 100438901 + ADGRG7 chr3 100348441 + Exonic hg19 LUSC TCGA-37-3783-01A 115 Out-of-Frame Intra-chr q12.2 q12.2 KB Pub 80729 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TFG-ADGRG7 TFG chr3 100438901 + ADGRG7 chr3 100348441 + Exonic hg19 LUSC TCGA-66-2787-01A 162 Out-of-Frame Intra-chr q12.2 q12.2 KB Pub 80730 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ITLN1-LOC101928372 ITLN1 chr1 160849100 - LOC101928372 chr1 160915081 - Exonic hg19 LUSC TCGA-77-7142-11A 4748 Out-of-Frame Intra-chr q23.3 80731 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-21-1070-01A 1451 Out-of-Frame Intra-chr q11.22 80732 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-58-A46L-01A 819 Out-of-Frame Intra-chr q11.22 80733 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677324 + IGLL5 chr22 23235963 + Exonic hg19 LUSC TCGA-63-A5MI-01A 139 Out-of-Frame Intra-chr q11.22 80734 ChimerSeq Tophat-Fusion TCGA_RNA-Seq THSD4-WARS THSD4 chr15 71839819 + WARS chr14 100803538 - Exonic hg19 LUSC TCGA-63-A5MP-01A 154 In-Frame Inter-chr q23 q32.2 Seq+ 80735 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPFIA1-FLJ42102 PPFIA1 chr11 70194525 + FLJ42102 chr11 71121304 + Exonic hg19 LUSC TCGA-85-7699-01A 238 CDS-3'UTR Intra-chr q13.3 q13.4 80736 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PPFIA1-FLJ42102 PPFIA1 chr11 70196031 + FLJ42102 chr11 71120082 + Exonic hg19 LUSC TCGA-85-7699-01A 238 CDS-3'UTR Intra-chr q13.3 q13.4 80737 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RGP1-MSMP RGP1 chr9 35752796 + MSMP chr9 35753766 - Exonic hg19 LUSC TCGA-66-2765-01A 193 Out-of-Frame Intra-chr p13.3 p13.3 80738 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACACA-KRT33A ACACA chr17 35453930 - KRT33A chr17 39504219 + Exonic hg19 LUSC TCGA-O2-A52S-01A 112 Out-of-Frame Intra-chr 80739 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57728676 + VMP1 chr17 57915655 + Exonic hg19 LUSC TCGA-77-7142-01A 286 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 80740 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DDX39A-ADGRE5 DDX39A chr19 14520545 - ADGRE5 chr19 14519029 + Exonic hg19 LUSC TCGA-22-4607-01A 129 Out-of-Frame Intra-chr p13.12 p13.12 80741 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DDX39A-ADGRE5 DDX39A chr19 14520553 - ADGRE5 chr19 14519299 + Exonic hg19 LUSC TCGA-22-4607-01A 129 Out-of-Frame Intra-chr p13.12 p13.12 80742 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NAALADL2-ABCC5 NAALADL2 chr3 175345173 + ABCC5 chr3 183643506 - Exonic hg19 LUSC TCGA-33-4538-01A 165 Intra-chr q26.31 q27.1 Seq+ 80743 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FAF1-THBS1 FAF1 chr1 51416164 - THBS1 chr15 39879736 - Exonic hg19 LUSC TCGA-70-6722-01A 2121 In-Frame Inter-chr p32.3 q14 Oncogene Tumor suppressor gene 80744 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OPCML-NTM OPCML chr11 132812824 - NTM chr11 132016171 + Exonic hg19 LUSC TCGA-51-4079-11A 138 Out-of-Frame Intra-chr q25 Tumor suppressor gene q25 Seq+ 80745 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-85-7698-01A 397 Out-of-Frame Intra-chr q11.22 80746 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-85-8052-01A 356 Out-of-Frame Intra-chr q11.22 80747 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677324 + IGLL5 chr22 23235963 + Exonic hg19 LUSC TCGA-85-A510-01A 380 Out-of-Frame Intra-chr q11.22 80748 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OPCML-NTM OPCML chr11 132812824 - NTM chr11 132016171 + Exonic hg19 LUSC TCGA-22-5472-11A 136 Out-of-Frame Intra-chr q25 Tumor suppressor gene q25 Seq+ 80749 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OPCML-NTM OPCML chr11 132812824 - NTM chr11 132016171 + Exonic hg19 LUSC TCGA-34-5928-01A 175 Out-of-Frame Intra-chr q25 Tumor suppressor gene q25 Seq+ 80750 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OPCML-NTM OPCML chr11 132812824 - NTM chr11 132016171 + Exonic hg19 LUSC TCGA-43-6771-11A 120 Out-of-Frame Intra-chr q25 Tumor suppressor gene q25 Seq+ 80751 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OPCML-NTM OPCML chr11 132812824 - NTM chr11 132016171 + Exonic hg19 LUSC TCGA-77-8008-01A 120 Out-of-Frame Intra-chr q25 Tumor suppressor gene q25 Seq+ 80752 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CREBBP-TCEB2 CREBBP chr16 3929832 - TCEB2 chr16 2827127 - Exonic hg19 LUSC TCGA-33-4587-01A 148 Out-of-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene Seq+ 80753 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CREBBP-PRSS33 CREBBP chr16 3929832 - PRSS33 chr16 2836121 - Exonic hg19 LUSC TCGA-33-4587-01A 168 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 80754 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AOAH-ELMO1 AOAH chr7 36698770 - ELMO1 chr7 36934621 - Exonic hg19 LUSC TCGA-77-7140-01A 149 In-Frame Intra-chr p14.2 p14.1 Seq+ 80755 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-85-8582-01A 1472 Out-of-Frame Intra-chr q11.22 80756 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TRAF7-LRRC1 TRAF7 chr16 2215936 + LRRC1 chr6 53743790 + Exonic hg19 LUSC TCGA-85-A4QR-01A 117 In-Frame Inter-chr p13.3 Oncogene p12.1 Seq+ 80757 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA1191-NOP16 KIAA1191 chr5 175777615 - NOP16 chr5 175811283 - Exonic hg19 LUSC TCGA-94-8491-01A 100 In-Frame Intra-chr q35.2 q35.2 Seq+ 80758 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIAA1191-NOP16 KIAA1191 chr5 175777615 - NOP16 chr5 175811374 - Exonic hg19 LUSC TCGA-94-8491-01A 100 In-Frame Intra-chr q35.2 q35.2 Seq+ 80759 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PARP8-CRYL1 PARP8 chr5 49963958 + CRYL1 chr13 20987525 - Exonic hg19 LUSC TCGA-56-7823-01B 118 Out-of-Frame Inter-chr q11.1 q12.11 Seq+ 80760 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CELSR1-SEZ6L CELSR1 chr22 46929523 - SEZ6L chr22 26688371 + Exonic hg19 LUSC TCGA-46-6025-01A 460 In-Frame Intra-chr q13.31 q12.1 Seq+ 80761 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OTUD7B-CTSS OTUD7B chr1 149949360 - CTSS chr1 150705620 - Exonic hg19 LUSC TCGA-68-7755-01A 291 Out-of-Frame Intra-chr q21.2 q21.3 Seq+ 80762 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-18-5592-01A 1010 Out-of-Frame Intra-chr q11.22 80763 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-21-5786-01A 2670 Out-of-Frame Intra-chr q11.22 80764 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-56-8628-01A 813 Out-of-Frame Intra-chr q11.22 80765 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SENP2-VPS8 SENP2 chr3 185307956 + VPS8 chr3 184742123 + Exonic hg19 LUSC TCGA-56-8628-01A 239 Out-of-Frame Intra-chr q27.2 q27.2 Seq+ 80766 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TPD52L1-RNF217 TPD52L1 chr6 125475115 + RNF217 chr6 125379087 + Exonic hg19 LUSC TCGA-68-7755-01A 117 Out-of-Frame Intra-chr q22.31 q22.31 Seq+ 80767 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SHC1-CKS1B SHC1 chr1 154941853 - CKS1B chr1 154947694 - Exonic hg19 LUSC TCGA-46-6025-01A 173 In-Frame Intra-chr q21.3 q21.3 Oncogene Seq+ 80768 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SHC1-CKS1B SHC1 chr1 154941853 - CKS1B chr1 154948284 - Exonic hg19 LUSC TCGA-46-6025-01A 166 Out-of-Frame Intra-chr q21.3 q21.3 Oncogene Seq+ 80769 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 LUSC TCGA-66-2786-01A 1637 Out-of-Frame Intra-chr q11.22 80770 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TFG-ADGRG7 TFG chr3 100438901 + ADGRG7 chr3 100348441 + Exonic hg19 LUSC TCGA-66-2792-01A 365 Out-of-Frame Intra-chr q12.2 q12.2 KB Pub 80771 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57739003 + VMP1 chr17 57915655 + Exonic hg19 LUSC TCGA-NC-A5HK-01A 724 Out-of-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 80772 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EIF4G1-ECE2 EIF4G1 chr3 184039449 + ECE2 chr3 184008184 + Exonic hg19 LUSC TCGA-43-7656-01A 271 In-Frame Intra-chr q27.1 q27.1 Seq+ 80773 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EIF4G1-ECE2 EIF4G1 chr3 184039451 + ECE2 chr3 184008339 + Exonic hg19 LUSC TCGA-43-7656-01A 271 Out-of-Frame Intra-chr q27.1 q27.1 Seq+ 80774 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ACTN4-EIF3K ACTN4 chr19 39138546 + EIF3K chr19 39123069 + Exonic hg19 LUSC TCGA-63-A5MM-01A 270 In-Frame Intra-chr Seq+ 80775 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OPCML-NTM OPCML chr11 132812820 - NTM chr11 132016175 + Exonic hg19 LUSC TCGA-92-7340-11A 152 In-Frame Intra-chr q25 Tumor suppressor gene q25 Seq+ 80776 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 LUSC TCGA-66-2759-01A 2355 Out-of-Frame Intra-chr q11.22 80777 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-22-4593-11A 318 Out-of-Frame Intra-chr q11.22 80778 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GSG1L-KCTD13 GSG1L chr16 27992927 - KCTD13 chr16 29934510 + Exonic hg19 LUSC TCGA-56-8629-01A 525 In-Frame Intra-chr p12.1 p11.2 80779 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HGS-GNAO1 HGS chr17 79654124 + GNAO1 chr16 56377674 + Exonic hg19 LUSC TCGA-37-3792-01A 121 Out-of-Frame Inter-chr q25.3 q13 Seq+ 80780 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PLD3-HIPK4 PLD3 chr19 40880526 + HIPK4 chr19 40886460 - Exonic hg19 LUSC TCGA-66-2759-01A 704 Out-of-Frame Intra-chr q13.2 q13.2 CMGC:DYRK Seq+ 80781 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR45B-B3GNTL1 WDR45B chr17 80601824 - B3GNTL1 chr17 80904858 - Exonic hg19 LUSC TCGA-90-6837-01A 428 Out-of-Frame Intra-chr q25.3 Seq+ 80782 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SFT2D2-SUCO SFT2D2 chr1 168208397 + SUCO chr1 172520651 + Exonic hg19 LUSC TCGA-43-2576-01A 231 Out-of-Frame Intra-chr q24.2 q24.3 Seq+ 80783 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ADAM9-LOC100130964 ADAM9 chr8 38948864 + LOC100130964 chr8 39424224 + Exonic hg19 LUSC TCGA-66-2759-01A 147 5'UTR-5'UTR Intra-chr 80784 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD51AP1-SLCO1C1 RAD51AP1 chr12 4653069 + SLCO1C1 chr12 20885842 + Exonic hg19 LUSC TCGA-37-3792-01A 128 Out-of-Frame Intra-chr p13.32 p12.2 Seq+ 80785 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD51AP1-SLCO1C1 RAD51AP1 chr12 4653069 + SLCO1C1 chr12 20890040 + Exonic hg19 LUSC TCGA-37-3792-01A 131 In-Frame Intra-chr p13.32 p12.2 Seq+ 80786 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RAD51AP1-SLCO1C1 RAD51AP1 chr12 4653076 + SLCO1C1 chr12 20885842 + Exonic hg19 LUSC TCGA-37-3792-01A 128 In-Frame Intra-chr p13.32 p12.2 Seq+ 80787 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ITLN1-LOC101928372 ITLN1 chr1 160849100 - LOC101928372 chr1 160915081 - Exonic hg19 LUSC TCGA-22-4593-11A 746 Out-of-Frame Intra-chr q23.3 80788 ChimerSeq Tophat-Fusion TCGA_RNA-Seq IRF2-LOC728175 IRF2 chr4 185395532 - LOC728175 chr4 185263205 - Exonic hg19 LUSC TCGA-46-6026-01A 100 5'UTR-3'UTR Intra-chr q35.1 Transcription factor 80789 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TFG-ADGRG7 TFG chr3 100438901 + ADGRG7 chr3 100348441 + Exonic hg19 LUSC TCGA-85-7697-01A 217 Out-of-Frame Intra-chr q12.2 q12.2 KB Pub 80790 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-85-7697-01A 859 Out-of-Frame Intra-chr q11.22 80791 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MRPL21-ANO1 MRPL21 chr11 68670891 - ANO1 chr11 69945838 - Exonic hg19 LUSC TCGA-34-5239-01A 144 Out-of-Frame Intra-chr q13.3 q13.3 80792 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OPCML-NTM OPCML chr11 132812824 - NTM chr11 132016171 + Exonic hg19 LUSC TCGA-34-5239-01A 131 Out-of-Frame Intra-chr q25 Tumor suppressor gene q25 Seq+ 80793 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OPCML-NTM OPCML chr11 132812824 - NTM chr11 132016171 + Exonic hg19 LUSC TCGA-77-7337-11A 143 Out-of-Frame Intra-chr q25 Tumor suppressor gene q25 Seq+ 80794 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TXNIP-NBPF20 TXNIP chr1 145439258 + NBPF20 chr1 145431359 + Exonic hg19 LUSC TCGA-77-6845-01A 132 Out-of-Frame Intra-chr q21.1 Tumor suppressor gene q21.1 80795 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LAMA5-RBBP8NL LAMA5 chr20 60905543 - RBBP8NL chr20 60994785 - Exonic hg19 LUSC TCGA-O2-A52N-01A 499 Out-of-Frame Intra-chr q13.33 q13.33 Seq+ 80796 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MBOAT1-CDKAL1 MBOAT1 chr6 20151415 - CDKAL1 chr6 21000591 - Exonic hg19 LUSC TCGA-43-6143-01A 1001 Out-of-Frame Intra-chr p22.3 p22.3 Seq+ 80797 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MBOAT1-CDKAL1 MBOAT1 chr6 20154882 - CDKAL1 chr6 21000602 - Exonic hg19 LUSC TCGA-43-6143-01A 954 In-Frame Intra-chr p22.3 p22.3 Seq+ 80798 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EGFR-ELDR EGFR chr7 55087057 + ELDR chr7 55306358 - Exonic hg19 LUSC TCGA-O2-A52N-01A 125 Out-of-Frame Intra-chr p11.2 TK:EGFR Oncogene 80799 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ELMO1-SCIN ELMO1 chr7 37136223 - SCIN chr7 12684208 + Exonic hg19 LUSC TCGA-77-6842-01A 108 In-Frame Intra-chr p14.1 p21.3 Seq+ 80800 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SMARCB1-SYN3 SMARCB1 chr22 24135874 + SYN3 chr22 32913289 + Exonic hg19 LUSC TCGA-43-6143-01A 133 In-Frame Intra-chr q11.23 Oncogene Tumor suppressor gene q12.3 80801 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SMARCB1-SYN3 SMARCB1 chr22 24135874 + SYN3 chr22 32913656 + Exonic hg19 LUSC TCGA-43-6143-01A 133 Out-of-Frame Intra-chr q11.23 Oncogene Tumor suppressor gene q12.3 80802 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KIF13A-F13A1 KIF13A chr6 17987284 - F13A1 chr6 6197558 - Exonic hg19 LUSC TCGA-37-A5EM-01A 427 In-Frame Intra-chr p22.3 p25.1 Seq+ 80803 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-22-5477-01A 361 Out-of-Frame Intra-chr q11.22 80804 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-33-4532-01A 216 Out-of-Frame Intra-chr q11.22 80805 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HIRA-MYH9 HIRA chr22 19370427 - MYH9 chr22 36737414 + Exonic hg19 LUSC TCGA-98-7454-01A 230 In-Frame Intra-chr q11.21 Tumor suppressor gene q12.3 Oncogene Tumor suppressor gene 80806 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ITLN1-LOC101928372 ITLN1 chr1 160849100 - LOC101928372 chr1 160915081 - Exonic hg19 LUSC TCGA-39-5040-11A 354 Out-of-Frame Intra-chr q23.3 80807 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DRG1-MYO18B DRG1 chr22 31799189 + MYO18B chr22 26317223 + Exonic hg19 LUSC TCGA-33-4532-01A 128 In-Frame Intra-chr q12.2 Tumor suppressor gene q12.1 Tumor suppressor gene Seq+ 80808 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MKKS-JAG1 MKKS chr20 10390663 - JAG1 chr20 10622773 + Exonic hg19 LUSC TCGA-77-8133-01A 213 In-Frame Intra-chr p12.2 p12.2 80809 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MKKS-JAG1 MKKS chr20 10393859 - JAG1 chr20 10623135 + Exonic hg19 LUSC TCGA-77-8133-01A 218 In-Frame Intra-chr p12.2 p12.2 80810 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ATP11A-CUL4A ATP11A chr13 113344768 + CUL4A chr13 113907395 + Exonic hg19 LUSC TCGA-21-1081-01A 150 In-Frame Intra-chr q34 q34 Seq+ 80811 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-34-8454-11A 1168 Out-of-Frame Intra-chr q11.22 80812 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-39-5040-01A 543 Out-of-Frame Intra-chr q11.22 80813 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-68-8250-01A 610 Out-of-Frame Intra-chr q11.22 80814 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-94-7943-01A 500 Out-of-Frame Intra-chr q11.22 80815 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PIK3CB-BFSP2 PIK3CB chr3 138452202 - BFSP2 chr3 133185671 + Exonic hg19 LUSC TCGA-66-2756-01A 165 In-Frame Intra-chr q22.3 Oncogene q22.1 Seq+ 80816 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GPR39-MGAT5 GPR39 chr2 133392020 + MGAT5 chr2 135028120 - Exonic hg19 LUSC TCGA-66-2756-01A 443 Out-of-Frame Intra-chr q21.2 q21.2 80817 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PHGDH-HMGCS2 PHGDH chr1 120283140 + HMGCS2 chr1 120295296 - Exonic hg19 LUSC TCGA-85-8277-01A 294 In-Frame Intra-chr p12 p12 Seq+ 80818 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ITGB4-SMIM6 ITGB4 chr17 73729772 + SMIM6 chr17 73642734 + Exonic hg19 LUSC TCGA-43-3394-01A 251 Out-of-Frame Intra-chr q25.1 q25.1 Seq+ 80819 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-63-A5MS-01A 361 Out-of-Frame Intra-chr q11.22 80820 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57746300 + VMP1 chr17 57886156 + Exonic hg19 LUSC TCGA-66-2781-01A 105 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 80821 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FN1-PECR FN1 chr2 216242897 - PECR chr2 216931240 - Exonic hg19 LUSC TCGA-37-4130-01A 135 In-Frame Intra-chr q35 Oncogene q35 Seq+ 80822 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677320 + IGLL5 chr22 23235959 + Exonic hg19 LUSC TCGA-77-7139-01A 436 Out-of-Frame Intra-chr q11.22 80823 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-33-4566-01A 218 Out-of-Frame Intra-chr q11.22 80824 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 LUSC TCGA-22-5482-01A 972 Out-of-Frame Intra-chr q11.22 80825 ChimerSeq Tophat-Fusion TCGA_RNA-Seq U2AF2-NLRP9 U2AF2 chr19 56181057 + NLRP9 chr19 56220409 - Exonic hg19 LUSC TCGA-33-4547-01A 210 Out-of-Frame Intra-chr q13.42 q13.42 Seq+ 80826 ChimerSeq Tophat-Fusion TCGA_RNA-Seq NUB1-ABCB8 NUB1 chr7 151042551 + ABCB8 chr7 150742295 + Exonic hg19 LUSC TCGA-66-2800-01A 102 In-Frame Intra-chr q36.1 q36.1 Seq+ 80827 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RARS-SLIT3 RARS chr5 167944921 + SLIT3 chr5 168311725 + Exonic hg19 LUSC TCGA-68-8251-01A 141 Out-of-Frame Intra-chr q34 q35.1 80828 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ITM2B-RB1 ITM2B chr13 48828071 + RB1 chr13 49027128 + Exonic hg19 LUSC TCGA-56-8307-01A 132 In-Frame Intra-chr q14.2 q14.2 Oncogene Tumor suppressor gene Seq+ 80829 ChimerSeq Tophat-Fusion TCGA_RNA-Seq EPN1-U2AF2 EPN1 chr19 56190220 + U2AF2 chr19 56185299 + Exonic hg19 LUSC TCGA-33-4547-01A 379 In-Frame Intra-chr q13.42 q13.42 Seq+ 80830 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SPIRE1-PTPN2 SPIRE1 chr18 12592487 - PTPN2 chr18 12830942 + Exonic hg19 LUSC TCGA-68-8251-01A 106 Out-of-Frame Intra-chr p11.21 p11.21 Tumor suppressor gene Seq+ 80831 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCGF3-FANCI PCGF3 chr4 738475 + FANCI chr15 89856134 + Exonic hg19 LUSC TCGA-43-6770-01A 302 In-Frame Inter-chr p16.3 q26.1 Seq+ 80832 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CLTC-VMP1 CLTC chr17 57697533 + VMP1 chr17 57842331 + Exonic hg19 LUSC TCGA-33-6737-01A 367 In-Frame Intra-chr q23.1 q23.1 KB Pub Seq+ 80833 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PVT1-CASC11 PVT1 chr8 128806979 + CASC11 chr8 128746204 - Exonic hg19 LUSC TCGA-56-5898-01A 654 Out-of-Frame Intra-chr q24.21 q24.21 Seq+ 80834 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-68-A59J-01A 224 Out-of-Frame Intra-chr q11.22 80835 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KDM2A-RHOD KDM2A chr11 66888828 + RHOD chr11 66833366 + Exonic hg19 LUSC TCGA-33-6737-01A 324 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 80836 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERGIC1-RANBP17 ERGIC1 chr5 172341840 + RANBP17 chr5 170720886 + Exonic hg19 LUSC TCGA-33-6737-01A 925 In-Frame Intra-chr q35.1 q35.1 Seq+ 80837 ChimerSeq Tophat-Fusion TCGA_RNA-Seq USP48-MAN1C1 USP48 chr1 22109316 - MAN1C1 chr1 26110153 + Exonic hg19 LUSC TCGA-85-8070-01A 932 In-Frame Intra-chr p36.12 p36.11 Seq+ 80838 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TXNRD1-CHST11 TXNRD1 chr12 104733050 + CHST11 chr12 104858480 - Exonic hg19 LUSC TCGA-63-A5MJ-01A 2043 In-Frame Intra-chr q23.3 q23.3 Seq+ 80839 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MCF2L2-ALG3 MCF2L2 chr3 182971259 + ALG3 chr3 183963599 - Exonic hg19 LUSC TCGA-56-5898-01A 206 Out-of-Frame Intra-chr q27.1 q27.1 80840 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ECE2-MCF2L2 ECE2 chr3 183999552 + MCF2L2 chr3 182971259 - Exonic hg19 LUSC TCGA-56-5898-01A 282 In-Frame Intra-chr q27.1 q27.1 80841 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ECE2-MCF2L2 ECE2 chr3 184000600 + MCF2L2 chr3 182971259 - Exonic hg19 LUSC TCGA-56-5898-01A 282 Out-of-Frame Intra-chr q27.1 q27.1 80842 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-34-5231-01A 2543 Out-of-Frame Intra-chr q11.22 80843 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-56-A4ZK-01A 441 Out-of-Frame Intra-chr q11.22 80844 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-56-A5DS-01A 1128 Out-of-Frame Intra-chr q11.22 80845 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-L3-A4E7-01A 1222 Out-of-Frame Intra-chr q11.22 80846 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677322 + IGLL5 chr22 23235958 + Exonic hg19 LUSC TCGA-96-8170-01A 910 Out-of-Frame Intra-chr q11.22 80847 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCID2-GRK1 PCID2 chr13 113857779 - GRK1 chr13 114322947 - Exonic hg19 LUSC TCGA-56-A4ZK-01A 140 In-Frame Intra-chr q34 80848 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PCID2-ATP4B PCID2 chr13 113862912 - ATP4B chr13 114309256 - Exonic hg19 LUSC TCGA-56-A4ZK-01A 2271 Out-of-Frame Intra-chr q34 q34 Seq+ 80849 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SFTPC-CD68 SFTPC chr8 22020192 - CD68 chr17 7483251 + Exonic hg19 LUSC TCGA-51-4080-11A 112 Out-of-Frame Inter-chr p21.3 p13.1 80850 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CUL4A-TMEM255B CUL4A chr13 113893864 + TMEM255B chr13 114502311 + Exonic hg19 LUSC TCGA-56-A4ZK-01A 112 Out-of-Frame Intra-chr q34 Seq+ 80851 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CUL4A-TMEM255B CUL4A chr13 113897358 + TMEM255B chr13 114502311 + Exonic hg19 LUSC TCGA-56-A4ZK-01A 112 Out-of-Frame Intra-chr q34 Seq+ 80852 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-21-1077-01A 1412 Out-of-Frame Intra-chr q11.22 80853 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-22-4595-01A 3987 Out-of-Frame Intra-chr q11.22 80854 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-43-5670-11A 230 Out-of-Frame Intra-chr q11.22 80855 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-56-5897-01A 6826 Out-of-Frame Intra-chr q11.22 80856 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MBD4-LNX1 MBD4 chr3 129151940 - LNX1 chr4 54389156 + Exonic hg19 LUSC TCGA-43-7657-01A 101 In-Frame Inter-chr q21.3 Tumor suppressor gene Transcription factor q12 80857 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MBD4-LNX1 MBD4 chr3 129151940 - LNX1 chr4 54390361 + Exonic hg19 LUSC TCGA-43-7657-01A 101 In-Frame Inter-chr q21.3 Tumor suppressor gene Transcription factor q12 80858 ChimerSeq Tophat-Fusion TCGA_RNA-Seq GPBP1L1-EFCAB14 GPBP1L1 chr1 46124362 - EFCAB14 chr1 47166111 - Exonic hg19 LUSC TCGA-94-7557-01A 137 Out-of-Frame Intra-chr p34.1 Transcription factor p33 80859 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TAF8-SLC22A16 TAF8 chr6 42023751 + SLC22A16 chr6 110763977 - Exonic hg19 LUSC TCGA-43-A475-01A 367 Out-of-Frame Intra-chr p21.1 q21 Seq+ 80860 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TAF8-SLC22A16 TAF8 chr6 42023769 + SLC22A16 chr6 110763979 - Exonic hg19 LUSC TCGA-43-A475-01A 367 In-Frame Intra-chr p21.1 q21 Seq+ 80861 ChimerSeq Tophat-Fusion TCGA_RNA-Seq LINC01006-RNF32 LINC01006 chr7 156265404 + RNF32 chr7 156450148 + Exonic hg19 LUSC TCGA-66-2763-01A 118 Out-of-Frame Intra-chr q36.3 q36.3 80862 ChimerSeq Tophat-Fusion TCGA_RNA-Seq B4GALT5-SLC9A8 B4GALT5 chr20 48273104 - SLC9A8 chr20 48430005 - Exonic hg19 LUSC TCGA-18-3419-01A 477 Out-of-Frame Intra-chr q13.13 q13.13 80863 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-18-3419-01A 9291 Out-of-Frame Intra-chr q11.22 80864 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-22-4609-11A 253 Out-of-Frame Intra-chr q11.22 80865 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-43-6647-11A 557 Out-of-Frame Intra-chr q11.22 80866 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-77-8139-01A 2226 Out-of-Frame Intra-chr q11.22 80867 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MRC2-VMP1 MRC2 chr17 60751530 + VMP1 chr17 57917128 + Exonic hg19 LUSC TCGA-58-8386-01A 144 In-Frame Intra-chr q23.2 q23.1 Seq+ 80868 ChimerSeq Tophat-Fusion TCGA_RNA-Seq RDH10-NEDD4 RDH10 chr8 74233166 - NEDD4 chr15 56253150 - Exonic hg19 LUSC TCGA-60-2698-01A 102 Out-of-Frame Inter-chr q21.11 q21.3 Tumor suppressor gene 80869 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-60-2709-01A 3363 Out-of-Frame Intra-chr q11.22 80870 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DCTN2-DDX23 DCTN2 chr12 57939810 - DDX23 chr12 49230048 - Exonic hg19 LUSC TCGA-85-6175-01A 325 In-Frame Intra-chr q13.3 q13.12 Seq+ 80871 ChimerSeq Tophat-Fusion TCGA_RNA-Seq OPCML-NTM OPCML chr11 132812824 - NTM chr11 132016171 + Exonic hg19 LUSC TCGA-85-6175-01A 153 Out-of-Frame Intra-chr q25 Tumor suppressor gene q25 Seq+ 80872 ChimerSeq Tophat-Fusion TCGA_RNA-Seq FNBP4-PVRL1 FNBP4 chr11 47786821 - PVRL1 chr11 119548566 - Exonic hg19 LUSC TCGA-96-7544-01A 113 In-Frame Intra-chr p11.2 Seq+ 80873 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BMS1P20-IGLL5 BMS1P20 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 LUSC TCGA-34-5232-01A 2672 Out-of-Frame Intra-chr q11.22 80874 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TRIO-ANKH TRIO chr5 14287171 + ANKH chr5 14751347 - Exonic hg19 LUSC TCGA-34-5241-01A 129 In-Frame Intra-chr p15.2 p15.2 Seq+ 80875 ChimerSeq Tophat-Fusion TCGA_RNA-Seq METTL21B-RASSF3 METTL21B chr12 58166855 + RASSF3 chr12 65078566 + Exonic hg19 LUSC TCGA-43-2581-01A 245 Out-of-Frame Intra-chr q14.2 Tumor suppressor gene Seq+ 80876 ChimerSeq Tophat-Fusion TCGA_RNA-Seq METTL21B-RASSF3 METTL21B chr12 58166910 + RASSF3 chr12 65078566 + Exonic hg19 LUSC TCGA-43-2581-01A 245 Out-of-Frame Intra-chr q14.2 Tumor suppressor gene Seq+ 80877 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMEM255B-GAS6 TMEM255B chr13 114514708 - GAS6 chr13 114536551 - Exonic hg19 LUSC TCGA-92-8065-01A 131 Out-of-Frame Intra-chr q34 Oncogene 80878 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMEM255B-GAS6 TMEM255B chr13 114514708 - GAS6 chr13 114537736 - Exonic hg19 LUSC TCGA-92-8065-01A 131 Out-of-Frame Intra-chr q34 Oncogene 80879 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ITPRIPL1-IL36G ITPRIPL1 chr2 96993505 + IL36G chr2 113742416 + Exonic hg19 LUSC TCGA-34-5241-01A 109 In-Frame Intra-chr q11.2 q14.1 Seq+ 80880 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ITPRIPL1-IL36G ITPRIPL1 chr2 96993854 + IL36G chr2 113742416 + Exonic hg19 LUSC TCGA-34-5241-01A 109 In-Frame Intra-chr q11.2 q14.1 Seq+ 80881 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ITPRIPL1-IL36G ITPRIPL1 chr2 96993994 + IL36G chr2 113742416 + Exonic hg19 LUSC TCGA-34-5241-01A 109 In-Frame Intra-chr q11.2 q14.1 Seq+ 80882 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CSTA-CASR CSTA chr3 122056494 + CASR chr3 121994658 + Exonic hg19 LUSC TCGA-92-8065-01A 101 In-Frame Intra-chr q21.1 q13.33 Seq+ 80883 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CDC6-LSM12 CDC6 chr17 38457272 + LSM12 chr17 42141168 + Exonic hg19 LUSC TCGA-6A-AB49-01A 158 3'UTR-CDS Intra-chr q21.2 q21.31 80884 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERG-TMPRSS2 ERG chr21 39947585 - TMPRSS2 chr21 42866504 - Exonic hg19 PRAD TCGA-EJ-7793-01A 10 In-Frame Intra-chr q22.2 Oncogene Transcription factor q22.3 Seq+ 80885 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AIMP2-EIF2AK1 AIMP2 chr7 6057675 + EIF2AK1 chr7 6064431 - Exonic hg19 PRAD TCGA-EJ-7123-01A 20 Out-of-Frame Intra-chr p22.1 Tumor suppressor gene p22.1 80886 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MUSK-LPAR1 MUSK chr9 113547259 + LPAR1 chr9 113703700 + Exonic hg19 PRAD TCGA-VN-A88L-01A 2 Out-of-Frame Intra-chr q31.3 TK:Musk q31.3 80887 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERG-TMPRSS2 ERG chr21 39947585 - TMPRSS2 chr21 42852528 - Exonic hg19 PRAD TCGA-V1-A8WS-01A 6 Out-of-Frame Intra-chr q22.2 Oncogene Transcription factor q22.3 Seq+ 80888 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERG-TMPRSS2 ERG chr21 39835397 - TMPRSS2 chr21 42870045 + Exonic hg19 PRAD TCGA-J9-A52B-01A 69 Out-of-Frame Intra-chr q22.2 Oncogene Transcription factor q22.3 Seq+ 80889 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERG-TMPRSS2 ERG chr21 39947585 - TMPRSS2 chr21 42861519 - Exonic hg19 PRAD TCGA-HC-7747-01A 4 Out-of-Frame Intra-chr q22.2 Oncogene Transcription factor q22.3 Seq+ 80890 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERG-TMPRSS2 ERG chr21 39872216 - TMPRSS2 chr21 42861415 + Exonic hg19 PRAD TCGA-EJ-8469-01A 9 In-Frame Intra-chr q22.2 Oncogene Transcription factor q22.3 Seq+ 80891 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERG-TMPRSS2 ERG chr21 39947585 - TMPRSS2 chr21 42870115 - Exonic hg19 PRAD TCGA-J4-A67S-01A 4 Out-of-Frame Intra-chr q22.2 Oncogene Transcription factor q22.3 Seq+ 80892 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSG101-YWHAB TSG101 chr11 18511838 + YWHAB chr20 43535053 + Exonic hg19 PRAD TCGA-CH-5761-01A 20 In-Frame Inter-chr p15.1 Tumor suppressor gene q13.12 80893 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSG101-YWHAB TSG101 chr11 18512110 + YWHAB chr20 43532656 + Exonic hg19 PRAD TCGA-CH-5761-01A 20 Out-of-Frame Inter-chr p15.1 Tumor suppressor gene q13.12 80894 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSG101-YWHAB TSG101 chr11 18512525 + YWHAB chr20 43530383 + Exonic hg19 PRAD TCGA-CH-5761-01A 20 In-Frame Inter-chr p15.1 Tumor suppressor gene q13.12 80895 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ERG-TMPRSS2 ERG chr21 39874175 + TMPRSS2 chr21 42872875 - Exonic hg19 PRAD TCGA-CH-5739-01A 4 In-Frame Intra-chr q22.2 Oncogene Transcription factor q22.3 Seq+ 80896 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSG101-YWHAB TSG101 chr11 18512110 + YWHAB chr20 43532656 + Exonic hg19 HNSC TCGA-CR-7365-01A 6 Out-of-Frame Inter-chr p15.1 Tumor suppressor gene q13.12 80897 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSG101-YWHAB TSG101 chr11 18512223 + YWHAB chr20 43530407 + Exonic hg19 HNSC TCGA-CR-7365-01A 6 Out-of-Frame Inter-chr p15.1 Tumor suppressor gene q13.12 80898 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSG101-YWHAB TSG101 chr11 18511838 + YWHAB chr20 43535044 + Exonic hg19 HNSC TCGA-CR-5250-01A 6 In-Frame Inter-chr p15.1 Tumor suppressor gene q13.12 80899 ChimerSeq Tophat-Fusion TCGA_RNA-Seq KRT4-S100A9 KRT4 chr12 53205548 - S100A9 chr1 153333128 + Exonic hg19 HNSC TCGA-CV-6962-11A 49 Out-of-Frame Inter-chr q13.13 q21.3 80900 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SNTB2-ZCRB1 SNTB2 chr16 69298721 + ZCRB1 chr12 42707558 - Exonic hg19 THYM TCGA-ZB-A963-01A 10 Out-of-Frame Inter-chr q12 80901 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSG101-YWHAB TSG101 chr11 18512109 + YWHAB chr20 43532655 + Exonic hg19 KIRC TCGA-CJ-4897-01A 7 Out-of-Frame Inter-chr p15.1 Tumor suppressor gene q13.12 80902 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CPA6-PREX2 CPA6 chr8 68358813 - PREX2 chr8 68932478 - Exonic hg19 UCS TCGA-N7-A4Y8-01A 18 Out-of-Frame Intra-chr q13.2 q13.2 80903 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ASCC3-GRIK2 ASCC3 chr6 101214440 - GRIK2 chr6 102247522 + Exonic hg19 BRCA TCGA-AN-A0AM-01A 3 In-Frame Intra-chr q16.3 q16.3 Seq+ 80904 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SMR3B-MYH9 SMR3B chr4 71255469 - MYH9 chr22 36745135 - Exonic hg19 BRCA TCGA-AN-A0G0-01A 7 Out-of-Frame Inter-chr q13.3 q12.3 Oncogene Tumor suppressor gene 80905 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTNNB1-ULK4 CTNNB1 chr3 41268842 + ULK4 chr3 41633414 + Exonic hg19 BRCA TCGA-AC-A6IW-01A 11 In-Frame Intra-chr p22.1 Oncogene p22.1 Other:ULK 80906 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTNNB1-ULK4 CTNNB1 chr3 41268842 + ULK4 chr3 41673149 + Exonic hg19 BRCA TCGA-AC-A6IW-01A 22 In-Frame Intra-chr p22.1 Oncogene p22.1 Other:ULK 80907 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTNNB1-ULK4 CTNNB1 chr3 41268842 + ULK4 chr3 41700610 + Exonic hg19 BRCA TCGA-AC-A6IW-01A 15 Out-of-Frame Intra-chr p22.1 Oncogene p22.1 Other:ULK 80908 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ZC3H15-FAM171B ZC3H15 chr2 187351183 + FAM171B chr2 187604954 + Exonic hg19 BRCA TCGA-AC-A6IW-01A 8 Out-of-Frame Intra-chr q32.1 q32.1 Seq+ 80909 ChimerSeq Tophat-Fusion TCGA_RNA-Seq DCAF13-RSPO2 DCAF13 chr8 104452498 + RSPO2 chr8 108930397 + Exonic hg19 BRCA TCGA-AN-A0XV-01A 41 In-Frame Intra-chr q22.3 q23.1 80910 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ASCC3-GRIK2 ASCC3 chr6 100978082 - GRIK2 chr6 102250312 - Exonic hg19 BRCA TCGA-E9-A248-01A 6 Out-of-Frame Intra-chr q16.3 q16.3 Seq+ 80911 ChimerSeq Tophat-Fusion TCGA_RNA-Seq ASCC3-GRIK2 ASCC3 chr6 101052506 - GRIK2 chr6 102250312 - Exonic hg19 BRCA TCGA-E9-A248-01A 3 Out-of-Frame Intra-chr q16.3 q16.3 Seq+ 80912 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CMC1-AZI2 CMC1 chr3 28361115 + AZI2 chr3 28373917 - Exonic hg19 BRCA TCGA-E9-A228-01A 25 Out-of-Frame Intra-chr p24.1 p24.1 Seq+ 80913 ChimerSeq Tophat-Fusion TCGA_RNA-Seq COL3A1-CLU COL3A1 chr2 189858974 - CLU chr8 27466602 - Exonic hg19 BRCA TCGA-A7-A26F-01A 9 Out-of-Frame Inter-chr q32.2 p21.1 Tumor suppressor gene 80914 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CELSR1-CERK CELSR1 chr22 46929523 - CERK chr22 47086096 - Exonic hg19 BRCA TCGA-E2-A14P-01A 52 Out-of-Frame Intra-chr q13.31 q13.31 Seq+ 80915 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSG101-YWHAB TSG101 chr11 18512089 - YWHAB chr20 43533689 - Exonic hg19 BRCA TCGA-AO-A03O-01A 7 In-Frame Inter-chr p15.1 Tumor suppressor gene q13.12 80916 ChimerSeq Tophat-Fusion TCGA_RNA-Seq BNC2-CNTLN BNC2 chr9 16596419 - CNTLN chr9 17273864 - Exonic hg19 BRCA TCGA-E2-A56Z-01A 14 Out-of-Frame Intra-chr p22.2 Transcription factor p22.2 80917 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTNNB1-ULK4 CTNNB1 chr3 41267045 + ULK4 chr3 41496987 + Exonic hg19 BRCA TCGA-A2-A3XY-01A 8 Out-of-Frame Intra-chr p22.1 Oncogene p22.1 Other:ULK 80918 ChimerSeq Tophat-Fusion TCGA_RNA-Seq VRK2-FANCL VRK2 chr2 58316857 + FANCL chr2 58393008 - Exonic hg19 BRCA TCGA-E9-A1NF-01A 11 In-Frame Intra-chr p16.1 CK1:VRK p16.1 Seq+ 80919 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CD44-PDHX CD44 chr11 35211611 + PDHX chr11 34952950 + Exonic hg19 BRCA TCGA-A7-A26G-01A 8 In-Frame Intra-chr p13 Oncogene Tumor suppressor gene p13 Seq+ 80920 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TSG101-YWHAB TSG101 chr11 18512223 + YWHAB chr20 43530407 + Exonic hg19 BRCA TCGA-A2-A0YD-01A 2 Out-of-Frame Inter-chr p15.1 Tumor suppressor gene q13.12 80921 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CDK5RAP2-ENG CDK5RAP2 chr9 123280704 - ENG chr9 130588950 - Exonic hg19 BRCA TCGA-E2-A14N-01A 13 In-Frame Intra-chr q33.2 q34.11 Seq+ 80922 ChimerSeq Tophat-Fusion TCGA_RNA-Seq HSPB1-EGR1 HSPB1 chr7 75933420 + EGR1 chr5 137802972 + Exonic hg19 BRCA TCGA-GI-A2C9-11A 2 In-Frame Inter-chr q11.23 q31.2 Tumor suppressor gene Transcription factor 80923 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MUSK-LPAR1 MUSK chr9 113547259 + LPAR1 chr9 113703700 + Exonic hg19 BRCA TCGA-AC-A3OD-01B 5 Out-of-Frame Intra-chr q31.3 TK:Musk q31.3 80924 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AIMP2-EIF2AK1 AIMP2 chr7 6063282 - EIF2AK1 chr7 6064405 - Exonic hg19 BRCA TCGA-AQ-A04L-01B 7 Out-of-Frame Intra-chr p22.1 Tumor suppressor gene p22.1 80925 ChimerSeq Tophat-Fusion TCGA_RNA-Seq AKAP9-CDK14 AKAP9 chr7 91714016 + CDK14 chr7 90708746 + Exonic hg19 LUSC TCGA-43-7658-01A 22 In-Frame Intra-chr q21.2 Oncogene q21.13 Seq+ 80926 ChimerSeq Tophat-Fusion TCGA_RNA-Seq IL6-LOC541472 IL6 chr7 22768398 + LOC541472 chr7 22767182 - Exonic hg19 LUSC TCGA-56-8082-11A 18 Out-of-Frame Intra-chr p15.3 Oncogene 80927 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MBOAT1-CDKAL1 MBOAT1 chr6 20115518 - CDKAL1 chr6 20756998 - Exonic hg19 LUSC TCGA-43-6143-01A 41 Out-of-Frame Intra-chr p22.3 p22.3 Seq+ 80928 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MBOAT1-CDKAL1 MBOAT1 chr6 20151415 - CDKAL1 chr6 20971655 - Exonic hg19 LUSC TCGA-43-6143-01A 44 Out-of-Frame Intra-chr p22.3 p22.3 Seq+ 80929 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MBOAT1-CDKAL1 MBOAT1 chr6 20151415 - CDKAL1 chr6 20974430 - Exonic hg19 LUSC TCGA-43-6143-01A 44 Out-of-Frame Intra-chr p22.3 p22.3 Seq+ 80930 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MBOAT1-CDKAL1 MBOAT1 chr6 20178923 - CDKAL1 chr6 21000602 - Exonic hg19 LUSC TCGA-43-6143-01A 33 Out-of-Frame Intra-chr p22.3 p22.3 Seq+ 80931 ChimerSeq Tophat-Fusion TCGA_RNA-Seq MBOAT1-CDKAL1 MBOAT1 chr6 20212366 - CDKAL1 chr6 21000591 - Exonic hg19 LUSC TCGA-43-6143-01A 35 In-Frame Intra-chr p22.3 p22.3 Seq+ 80932 ChimerSeq Tophat-Fusion TCGA_RNA-Seq WDR83-DHPS WDR83 chr19 12786390 - DHPS chr19 12786688 - Exonic hg19 LUSC TCGA-56-A4BX-01A 13 Out-of-Frame Intra-chr p13.13 p13.13 80933 ChimerSeq Tophat-Fusion TCGA_RNA-Seq IL6-LOC541472 IL6 chr7 22768350 + LOC541472 chr7 22767184 - Exonic hg19 LUSC TCGA-43-6647-11A 8 Out-of-Frame Intra-chr p15.3 Oncogene 80934 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRR5-ARHGAP8 PRR5 chr22 45110550 + ARHGAP8 chr22 45241148 + Exonic hg19 LUSC TCGA-60-2698-01A 4 In-Frame Intra-chr q13.31 Tumor suppressor gene q13.31 80935 ChimerSeq Tophat-Fusion TCGA_RNA-Seq PRR5-ARHGAP8 PRR5 chr22 45122513 + ARHGAP8 chr22 45241148 + Exonic hg19 LUSC TCGA-60-2698-01A 6 Out-of-Frame Intra-chr q13.31 Tumor suppressor gene q13.31 80936 ChimerSeq Tophat-Fusion TCGA_RNA-Seq IL6-LOC541472 IL6 chr7 22768427 + LOC541472 chr7 22767181 - Exonic hg19 LUSC TCGA-77-7338-11A 21 Out-of-Frame Intra-chr p15.3 Oncogene 80937 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOF-HEXDC RHOF chr12 121801707 - HEXDC chr17 82440997 + Exonic hg38 ACC TCGA-OR-A5J1-01A 51 268 Out-of-frame Inter-chr q24.31 q25.3 80938 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRLR-CLPTM1L PRLR chr5 35230268 - CLPTM1L chr5 1318453 - Exonic hg38 ACC TCGA-OR-A5J1-01A 22 103 5'UTR-3'UTR Intra-chr p13.2 p15.33 Seq+ 80939 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCTD5-TSC2 KCTD5 chr16 2697997 + TSC2 chr16 2086193 + Exonic hg38 ACC TCGA-OR-A5J1-01A 24 59 In-Frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Seq+ 80940 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCAPD2-MRPL48 NCAPD2 chr12 6494154 + MRPL48 chr11 73805027 + Exonic hg38 ACC TCGA-OR-A5J1-01A 23 51 5'UTR-5'UTR Inter-chr p13.31 q13.4 Seq+ 80941 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAB2-ARSB DAB2 chr5 39392365 - ARSB chr5 78969192 - Exonic hg38 ACC TCGA-OR-A5J1-01A 13 59 In-Frame Intra-chr p13.1 Tumor suppressor gene q14.1 Seq+ 80942 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBCA-ARSB TBCA chr5 77708242 - ARSB chr5 78839426 - Exonic hg38 ACC TCGA-OR-A5J1-01A 5 16 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 80943 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAB2-COL4A3BP DAB2 chr5 39424804 - COL4A3BP chr5 75459181 - Exonic hg38 ACC TCGA-OR-A5J1-01A 4 18 5'UTR-CDS Intra-chr p13.1 Tumor suppressor gene q13.3 Seq+ 80944 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBCD-GLIPR2 TBCD chr17 82884202 + GLIPR2 chr9 36147786 + Exonic hg38 ACC TCGA-OR-A5J1-01A 3 15 5'UTR-5'UTR Inter-chr p13.3 Seq+ 80945 ChimerSeq TCGA FAWG TCGA_RNA-Seq C9-COL4A3BP C9 chr5 39424804 - COL4A3BP chr5 75459181 - Exonic hg38 ACC TCGA-OR-A5J1-01A 4 10 5'UTR-CDS Intra-chr p13.1 q13.3 80946 ChimerSeq TCGA FAWG TCGA_RNA-Seq CWC27-PLPP1 CWC27 chr5 64885546 + PLPP1 chr5 55426039 - Exonic hg38 ACC TCGA-OR-A5J1-01A 5 5 Out-of-frame Intra-chr q12.3 q11.2 80947 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNC1I1-ASB4 DYNC1I1 chr7 95869998 + ASB4 chr7 95495758 + Exonic hg38 ACC TCGA-OR-A5J1-01A 4 9 In-Frame Intra-chr q21.3 q21.3 Seq+ 80948 ChimerSeq TCGA FAWG TCGA_RNA-Seq UIMC1-DBN1 UIMC1 chr5 176943335 - DBN1 chr5 177468899 - Exonic hg38 ACC TCGA-OR-A5J1-01A 3 13 Out-of-frame Intra-chr q35.2 Tumor suppressor gene q35.3 Seq+ 80949 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2A-ATP5L KMT2A chr11 118482495 + ATP5L chr11 118431024 + Exonic hg38 ACC TCGA-OR-A5J1-01A 2 15 Out-of-frame Intra-chr q23.3 Oncogene Transcription factor q23.3 80950 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIER3-KIF2A MIER3 chr5 56935428 - KIF2A chr5 62385484 + Exonic hg38 ACC TCGA-OR-A5J1-01A 3 9 In-Frame Intra-chr q11.2 q12.1 Seq+ 80951 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM14-BBS1 RBM14 chr11 66618561 + BBS1 chr11 66515540 + Exonic hg38 ACC TCGA-OR-A5J1-01A 1 17 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 Seq+ 80952 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPUL1-CLIP3 HNRNPUL1 chr19 41268345 + CLIP3 chr19 36032766 - Exonic hg38 ACC TCGA-OR-A5J1-01A 1 11 CDS-5'UTR Intra-chr q13.2 q13.12 Seq+ 80953 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRG4-SCNN1D NRG4 chr15 76009200 - SCNN1D chr1 1290477 + Exonic hg38 ACC TCGA-OR-A5J1-01A 1 9 Out-of-frame Inter-chr q24.2 p36.33 Seq+ 80954 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNPO1-MEF2C TNPO1 chr5 72816752 + MEF2C chr5 88761328 - Exonic hg38 ACC TCGA-OR-A5J1-01A 2 3 In-Frame Intra-chr q13.2 q14.3 Transcription factor Seq+ 80955 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAPD4-GPBP1 PAPD4 chr5 79613075 + GPBP1 chr5 57175448 + Exonic hg38 ACC TCGA-OR-A5J1-01A 1 5 Out-of-frame Intra-chr q14.1 q11.2 Transcription factor Seq+ 80956 ChimerSeq TCGA FAWG TCGA_RNA-Seq GIGYF2-HSCB GIGYF2 chr2 232794944 + HSCB chr22 28751241 + Exonic hg38 ACC TCGA-OR-A5J1-01A 1 3 In-Frame Inter-chr q37.1 q12.1 80957 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASXL2-PPWD1 ASXL2 chr2 25806229 - PPWD1 chr5 65576879 + Exonic hg38 ACC TCGA-OR-A5J2-01A 2 17 In-Frame Inter-chr p23.3 q12.3 Seq+ 80958 ChimerSeq TCGA FAWG TCGA_RNA-Seq AJAP1-CYTH3 AJAP1 chr1 4655454 + CYTH3 chr7 6190531 - Exonic hg38 ACC TCGA-OR-A5J2-01A 1 13 Out-of-frame Inter-chr p36.32 Tumor suppressor gene p22.1 Seq+ 80959 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASB4-DYNC1I1 ASB4 chr7 95536550 + DYNC1I1 chr7 95804721 + Exonic hg38 ACC TCGA-OR-A5J3-01A 1 1 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 80960 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF1B-FAM58A KIF1B chr1 10232434 + FAM58A chrX 153596187 - Exonic hg38 ACC TCGA-OR-A5J7-01A 50 448 Out-of-frame Inter-chr p36.22 Tumor suppressor gene q28 Seq+ 80961 ChimerSeq TCGA FAWG TCGA_RNA-Seq FLVCR2-BATF FLVCR2 chr14 75579641 + BATF chr14 75546462 + Exonic hg38 ACC TCGA-OR-A5J7-01A 49 328 In-Frame Intra-chr q24.3 q24.3 Transcription factor Seq+ 80962 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRX-BLVRB PRX chr19 40398620 - BLVRB chr19 40448046 - Exonic hg38 ACC TCGA-OR-A5J7-01A 54 162 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 80963 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDXK-RRP1B PDXK chr21 43758542 + RRP1B chr21 43694893 + Exonic hg38 ACC TCGA-OR-A5J7-01A 32 131 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 80964 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASPSCR1-HGS ASPSCR1 chr17 81985607 + HGS chr17 81700467 + Exonic hg38 ACC TCGA-OR-A5J7-01A 25 93 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 80965 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCMH1-CA6 SCMH1 chr1 41033983 - CA6 chr1 8949263 + Exonic hg38 ACC TCGA-OR-A5J7-01A 19 82 In-Frame Intra-chr p34.2 Transcription factor p36.23 Seq+ 80966 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPKAPK5-ALDH2 MAPKAPK5 chr12 111842769 + ALDH2 chr12 111803859 + Exonic hg38 ACC TCGA-OR-A5J7-01A 9 57 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 Seq+ 80967 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEBP1-DENND4B PEBP1 chr12 118139551 + DENND4B chr1 153936188 - Exonic hg38 ACC TCGA-OR-A5J7-01A 4 76 Out-of-frame Inter-chr q24.23 Tumor suppressor gene q21.3 Seq+ 80968 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFE2L1-NPEPPS NFE2L1 chr17 48048462 + NPEPPS chr17 47596353 + Exonic hg38 ACC TCGA-OR-A5J7-01A 10 41 5'UTR-CDS Intra-chr q21.32 Transcription factor q21.32 Seq+ 80969 ChimerSeq TCGA FAWG TCGA_RNA-Seq NR5A1-NR6A1 NR5A1 chr9 124500090 - NR6A1 chr9 124524873 - Exonic hg38 ACC TCGA-OR-A5J7-01A 5 43 Out-of-frame Intra-chr q33.3 Transcription factor q33.3 Transcription factor Seq+ 80970 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK1G1-CS CSNK1G1 chr15 64355988 - CS chr12 56286645 - Exonic hg38 ACC TCGA-OR-A5J7-01A 4 42 5'UTR-CDS Inter-chr q22.31 q13.3 Seq+ 80971 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2I-FLAD1 GTF2I chr7 74658068 + FLAD1 chr1 154988105 + Exonic hg38 ACC TCGA-OR-A5J7-01A 7 28 5'UTR-CDS Inter-chr q11.23 Transcription factor q21.3 Seq+ 80972 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4B-CCDC94 KDM4B chr19 5047669 + CCDC94 chr19 4247119 + Exonic hg38 ACC TCGA-OR-A5J7-01A 8 23 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 80973 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBNO2-TULP2 SBNO2 chr19 1168694 - TULP2 chr19 48889631 - Exonic hg38 ACC TCGA-OR-A5J7-01A 5 34 5'UTR-CDS Intra-chr p13.3 q13.33 Seq+ 80974 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM87B-PVT1 TMEM87B chr2 112081118 + PVT1 chr8 127890589 + Exonic hg38 ACC TCGA-OR-A5J7-01A 5 24 CDS-5'UTR Inter-chr q13 q24.21 80975 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGAP1-HSPD1 PGAP1 chr2 196885424 - HSPD1 chr2 197497392 - Exonic hg38 ACC TCGA-OR-A5J7-01A 5 16 In-Frame Intra-chr q33.1 q33.1 Tumor suppressor gene Seq+ 80976 ChimerSeq TCGA FAWG TCGA_RNA-Seq RCOR1-PPP2R5C RCOR1 chr14 102681978 + PPP2R5C chr14 101856686 + Exonic hg38 ACC TCGA-OR-A5J7-01A 3 21 In-Frame Intra-chr q32.31 q32.31 Tumor suppressor gene Seq+ 80977 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4-ENPP7P14 MAP4 chr3 47928228 - ENPP7P14 chr16 5111430 - Exonic hg38 ACC TCGA-OR-A5J7-01A 5 10 Out-of-frame Inter-chr p21.31 p13.3 80978 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDEL1-KCNB1 NDEL1 chr17 8454887 + KCNB1 chr20 49310799 - Exonic hg38 ACC TCGA-OR-A5J7-01A 2 17 CDS-3'UTR Inter-chr p13.1 q13.13 80979 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELMSAN1-ALDH6A1 ELMSAN1 chr14 73787102 - ALDH6A1 chr14 74075017 - Exonic hg38 ACC TCGA-OR-A5J7-01A 2 13 5'UTR-5'UTR Intra-chr q24.3 q24.3 Seq+ 80980 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOSC10-MTOR EXOSC10 chr1 11079711 - MTOR chr1 11130777 - Exonic hg38 ACC TCGA-OR-A5J7-01A 2 9 In-Frame Intra-chr p36.22 p36.22 Oncogene Seq+ 80981 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-MERTK PVT1 chr8 127794734 + MERTK chr2 111965191 + Exonic hg38 ACC TCGA-OR-A5J7-01A 2 9 5'UTR-CDS Inter-chr q24.21 q13 80982 ChimerSeq TCGA FAWG TCGA_RNA-Seq AS3MT-SUFU AS3MT chr10 102890678 + SUFU chr10 102597140 + Exonic hg38 ACC TCGA-OR-A5J7-01A 2 7 In-Frame Intra-chr q24.32 q24.32 Oncogene Tumor suppressor gene Seq+ 80983 ChimerSeq TCGA FAWG TCGA_RNA-Seq AARS2-SPATS1 AARS2 chr6 44310994 - SPATS1 chr6 44360446 + Exonic hg38 ACC TCGA-OR-A5J8-01A 184 1079 In-Frame Intra-chr p21.1 p21.1 Seq+ 80984 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF4H-AARS2 EIF4H chr7 74174442 + AARS2 chr6 44312263 - Exonic hg38 ACC TCGA-OR-A5J8-01A 118 449 Out-of-frame Inter-chr q11.23 p21.1 Seq+ 80985 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPRIN1-CD151 CAPRIN1 chr11 34090678 + CD151 chr11 838133 + Exonic hg38 ACC TCGA-OR-A5J8-01A 8 65 In-Frame Intra-chr p13 p15.5 Seq+ 80986 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFKBIE-FBXO9 NFKBIE chr6 44262560 - FBXO9 chr6 53071057 + Exonic hg38 ACC TCGA-OR-A5J8-01A 1 15 In-Frame Intra-chr p21.1 p12.1 Seq+ 80987 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF185-SMTN RNF185 chr22 31192702 + SMTN chr22 31095303 + Exonic hg38 ACC TCGA-OR-A5J8-01A 1 6 In-Frame Intra-chr q12.2 q12.2 Seq+ 80988 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDR2-ATF6 DDR2 chr1 162655374 + ATF6 chr1 161958446 + Exonic hg38 ACC TCGA-OR-A5J8-01A 1 3 5'UTR-CDS Intra-chr q23.3 TK:DDR Oncogene Tumor suppressor gene q23.3 Transcription factor 80989 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R5C-PRKD1 PPP2R5C chr14 101810036 + PRKD1 chr14 29599817 - Exonic hg38 ACC TCGA-OR-A5J9-01A 2 33 Out-of-frame Intra-chr q32.31 Tumor suppressor gene q12 Seq+ 80990 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITPKA-NUSAP1 ITPKA chr15 41494416 + NUSAP1 chr15 41342386 + Exonic hg38 ACC TCGA-OR-A5J9-01A 2 13 In-Frame Intra-chr q15.1 q15.1 Seq+ 80991 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCS1-GPR107 NCS1 chr9 130172727 + GPR107 chr9 130127483 + Exonic hg38 ACC TCGA-OR-A5J9-01A 3 9 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 80992 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD51B-BAZ1A RAD51B chr14 67887204 + BAZ1A chr14 34758846 - Exonic hg38 ACC TCGA-OR-A5J9-01A 2 3 Out-of-frame Intra-chr q24.1 q13.2 Seq+ 80993 ChimerSeq TCGA FAWG TCGA_RNA-Seq HELLPAR-NTN4 HELLPAR chr12 102315490 + NTN4 chr12 95683711 - Exonic hg38 ACC TCGA-OR-A5JA-01A 3 19 Out-of-frame Intra-chr q23.2 q22 80994 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAH-METAP2 PAH chr12 102894735 - METAP2 chr12 95512801 + Exonic hg38 ACC TCGA-OR-A5JA-01A 4 10 Out-of-frame Intra-chr q23.2 q22 Seq+ 80995 ChimerSeq TCGA FAWG TCGA_RNA-Seq VCP-FAM214B VCP chr9 35072337 - FAM214B chr9 35108737 - Exonic hg38 ACC TCGA-OR-A5JA-01A 5 6 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 80996 ChimerSeq TCGA FAWG TCGA_RNA-Seq NTN4-PAH NTN4 chr12 95682707 - PAH chr12 102894918 - Exonic hg38 ACC TCGA-OR-A5JA-01A 2 16 Out-of-frame Intra-chr q22 q23.2 Seq+ 80997 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIAT-CRYBA4 MIAT chr22 26657654 + CRYBA4 chr22 26630340 + Exonic hg38 ACC TCGA-OR-A5JA-01A 2 11 5'UTR-CDS Intra-chr q12.1 q12.1 80998 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC44A2-LDLR SLC44A2 chr19 10635515 + LDLR chr19 11131281 + Exonic hg38 ACC TCGA-OR-A5JA-01A 1 6 In-Frame Intra-chr p13.2 p13.2 80999 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-NTN4 FRS2 chr12 69470530 + NTN4 chr12 95670146 - Exonic hg38 ACC TCGA-OR-A5JA-01A 1 4 5'UTR-CDS Intra-chr q15 q22 Seq+ 81000 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST3GAL3-EBNA1BP2 ST3GAL3 chr1 43707693 + EBNA1BP2 chr1 43261918 - Exonic hg38 ACC TCGA-OR-A5JB-01A 6 5 5'UTR-5'UTR Intra-chr p34.1 p34.2 81001 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM19A4-LMOD3 FAM19A4 chr3 68880730 - LMOD3 chr3 69122409 - Exonic hg38 ACC TCGA-OR-A5JC-01A 3 9 Out-of-frame Intra-chr p14.1 p14.1 Seq+ 81002 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R5E-XRCC3 PPP2R5E chr14 63415140 - XRCC3 chr14 103711567 - Exonic hg38 ACC TCGA-OR-A5JC-01A 3 1 CDS-5'UTR Intra-chr q23.2 q32.33 Seq+ 81003 ChimerSeq TCGA FAWG TCGA_RNA-Seq HERC1-DAPK2 HERC1 chr15 63664470 - DAPK2 chr15 63983754 - Exonic hg38 ACC TCGA-OR-A5JC-01A 1 3 Out-of-frame Intra-chr q22.31 q22.31 CAMK:DAPK Tumor suppressor gene Seq+ 81004 ChimerSeq TCGA FAWG TCGA_RNA-Seq MALAT1-FAM166A MALAT1 chr11 65502076 + FAM166A chr9 137245222 - Exonic hg38 ACC TCGA-OR-A5JD-01A 15 79 Out-of-frame Inter-chr q13.1 q34.3 Seq+ 81005 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETX-RAB14 SETX chr9 132354917 - RAB14 chr9 121193419 - Exonic hg38 ACC TCGA-OR-A5JE-01A 7 18 5'UTR-5'UTR Intra-chr q34.13 q33.2 Seq+ 81006 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC12A4-DPEP2 SLC12A4 chr16 67957742 - DPEP2 chr16 67999748 - Exonic hg38 ACC TCGA-OR-A5JE-01A 1 19 CDS-3'UTR Intra-chr q22.1 q22.1 Seq+ 81007 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNhg38-USP49 SNhg38 chr16 2155143 - USP49 chr6 41799938 - Exonic hg38 ACC TCGA-OR-A5JF-01A 155 856 Out-of-frame Inter-chr p13.3 p21.1 81008 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM96B-CYFIP1 FAM96B chr16 66933614 - CYFIP1 chr15 22932340 - Exonic hg38 ACC TCGA-OR-A5JF-01A 1 2 Out-of-frame Inter-chr q22.1 q11.2 81009 ChimerSeq TCGA FAWG TCGA_RNA-Seq JADE2-UBE2B JADE2 chr5 134526011 + UBE2B chr5 134390225 + Exonic hg38 ACC TCGA-OR-A5JK-01A 3 29 5'UTR-CDS Intra-chr q31.1 q31.1 81010 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB38-C17orf64 ZBTB38 chr3 141369946 + C17orf64 chr17 60431181 + Exonic hg38 ACC TCGA-OR-A5JK-01A 2 15 5'UTR-CDS Inter-chr q23 Transcription factor q23.2 Seq+ 81011 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEG3-DLK1 MEG3 chr14 100845533 + DLK1 chr14 100728396 + Exonic hg38 ACC TCGA-OR-A5JK-01A 1 1 5'UTR-CDS Intra-chr q32.2 Tumor suppressor gene q32.2 Tumor suppressor gene 81012 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2A1-POMT2 GTF2A1 chr14 81220489 - POMT2 chr14 77302943 - Exonic hg38 ACC TCGA-OR-A5JL-01A 12 38 Out-of-frame Intra-chr q31.1 q24.3 Seq+ 81013 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO2-GALNT8 ANO2 chr12 5732517 - GALNT8 chr12 4850740 + Exonic hg38 ACC TCGA-OR-A5JL-01A 7 12 Out-of-frame Intra-chr p13.31 p13.32 81014 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF6L-PCYT1A TAF6L chr11 62771490 + PCYT1A chr3 196242640 - Exonic hg38 ACC TCGA-OR-A5JM-01A 12 21 5'UTR-CDS Inter-chr q12.3 q29 Seq+ 81015 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCARB2-SGMS1 SCARB2 chr4 76213427 - SGMS1 chr10 50344345 - Exonic hg38 ACC TCGA-OR-A5JM-01A 3 15 CDS-5'UTR Inter-chr q21.1 q11.23 Tumor suppressor gene Seq+ 81016 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIN7A-R3HDM2 LIN7A chr12 80811465 - R3HDM2 chr12 57310463 - Exonic hg38 ACC TCGA-OR-A5JM-01A 3 1 3'UTR-5'UTR Intra-chr q21.31 q13.3 Seq+ 81017 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF5A-DTX1 KIF5A chr12 57567618 + DTX1 chr12 113077424 + Exonic hg38 ACC TCGA-OR-A5JM-01A 1 6 Out-of-frame Intra-chr q13.3 q24.13 81018 ChimerSeq TCGA FAWG TCGA_RNA-Seq WBP1L-DLK1 WBP1L chr10 102816267 + DLK1 chr14 100728421 + Exonic hg38 ACC TCGA-OR-A5JM-01A 1000 1000 Out-of-frame Inter-chr q24.32 q32.2 Tumor suppressor gene 81019 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMLHE-VBP1 TMLHE chrX 155524456 - VBP1 chrX 155208874 + Exonic hg38 ACC TCGA-OR-A5JO-01A 1 13 CDS-5'UTR Intra-chr q28 q28 Seq+ 81020 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDLR-ZGLP1 LDLR chr19 11089615 + ZGLP1 chr19 10308391 - Exonic hg38 ACC TCGA-OR-A5JP-01A 421 7675 Out-of-frame Intra-chr p13.2 p13.2 Transcription factor Seq+ 81021 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEG3-DENR PEG3 chr19 56836070 - DENR chr12 122767588 + Exonic hg38 ACC TCGA-OR-A5JP-01A 35 260 Out-of-frame Inter-chr q13.43 Tumor suppressor gene Transcription factor q24.31 Seq+ 81022 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZIM2-DENR ZIM2 chr19 56836070 - DENR chr12 122767588 + Exonic hg38 ACC TCGA-OR-A5JP-01A 35 260 Out-of-frame Inter-chr q13.43 Transcription factor q24.31 Seq+ 81023 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARMC9-BLVRB ARMC9 chr2 231198698 + BLVRB chr19 40451492 - Exonic hg38 ACC TCGA-OR-A5JP-01A 40 215 5'UTR-CDS Inter-chr q37.1 q13.2 Seq+ 81024 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAMP4-COX8A SCAMP4 chr19 1918990 + COX8A chr11 63976225 + Exonic hg38 ACC TCGA-OR-A5JP-01A 10 287 Out-of-frame Inter-chr p13.3 q13.1 Seq+ 81025 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYLIP-OR5V1 MYLIP chr6 16130747 + OR5V1 chr6 29356277 - Exonic hg38 ACC TCGA-OR-A5JP-01A 7 74 CDS-5'UTR Intra-chr p22.3 Seq+ 81026 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H4-ARHGAP35 ZC3H4 chr19 47110895 - ARHGAP35 chr19 46987989 + Exonic hg38 ACC TCGA-OR-A5JP-01A 7 46 Out-of-frame Intra-chr q13.32 q13.32 Transcription factor 81027 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAPTM4B-ARMC9 LAPTM4B chr8 97776108 + ARMC9 chr2 231355798 + Exonic hg38 ACC TCGA-OR-A5JP-01A 7 14 Out-of-frame Inter-chr q22.1 q37.1 Seq+ 81028 ChimerSeq TCGA FAWG TCGA_RNA-Seq QSOX2-CTU2 QSOX2 chr9 136245476 - CTU2 chr16 88714860 + Exonic hg38 ACC TCGA-OR-A5JP-01A 4 25 Out-of-frame Inter-chr q34.3 q24.3 Seq+ 81029 ChimerSeq TCGA FAWG TCGA_RNA-Seq RECQL5-CACNA1G RECQL5 chr17 75658298 - CACNA1G chr17 50590471 + Exonic hg38 ACC TCGA-OR-A5JP-01A 1 6 In-Frame Intra-chr q25.1 q21.33 Seq+ 81030 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLK1-MTCO1P12 DLK1 chr14 100729066 + MTCO1P12 chr1 631074 + Exonic hg38 ACC TCGA-OR-A5JR-01A 1 53 Out-of-frame Inter-chr q32.2 Tumor suppressor gene p36.33 81031 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD1-EFNA5 NSD1 chr5 177192019 + EFNA5 chr5 107381376 - Exonic hg38 ACC TCGA-OR-A5JS-01A 26 92 In-Frame Intra-chr q35.3 Oncogene q21.3 Tumor suppressor gene Seq+ 81032 ChimerSeq TCGA FAWG TCGA_RNA-Seq GJC1-SKAP1 GJC1 chr17 44807394 - SKAP1 chr17 48189500 - Exonic hg38 ACC TCGA-OR-A5JS-01A 23 70 5'UTR-CDS Intra-chr q21.31 q21.32 Seq+ 81033 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLK2-CEP112 TLK2 chr17 62608148 + CEP112 chr17 65689218 - Exonic hg38 ACC TCGA-OR-A5JS-01A 19 67 In-Frame Intra-chr q23.2 Other:TLK q24.1 Seq+ 81034 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNG1-SLCO6A1 CCNG1 chr5 163444481 + SLCO6A1 chr5 102373494 - Exonic hg38 ACC TCGA-OR-A5JS-01A 2 17 5'UTR-CDS Intra-chr q34 q21.1 Seq+ 81035 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC47-TERT CCDC47 chr17 63773412 - TERT chr5 1282624 - Exonic hg38 ACC TCGA-OR-A5JS-01A 2 8 5'UTR-CDS Inter-chr q23.3 p15.33 Oncogene Seq+ 81036 ChimerSeq TCGA FAWG TCGA_RNA-Seq UIMC1-PJA2 UIMC1 chr5 176982469 - PJA2 chr5 109383520 - Exonic hg38 ACC TCGA-OR-A5JS-01A 3 4 CDS-5'UTR Intra-chr q35.2 Tumor suppressor gene q21.3 Seq+ 81037 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS2-GLIS3 INTS2 chr17 61911520 - GLIS3 chr9 3829492 - Exonic hg38 ACC TCGA-OR-A5JS-01A 1 10 Out-of-frame Inter-chr q23.2 p24.2 Transcription factor Seq+ 81038 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF20-SPAG4 PHF20 chr20 35899648 + SPAG4 chr20 35619195 + Exonic hg38 ACC TCGA-OR-A5JT-01A 9 36 In-Frame Intra-chr q11.22 Transcription factor q11.22 Seq+ 81039 ChimerSeq TCGA FAWG TCGA_RNA-Seq C4B-DLK1 C4B chr6 32032133 + DLK1 chr14 100734648 + Exonic hg38 ACC TCGA-OR-A5JT-01A 1 15 3'UTR-CDS Inter-chr q32.2 Tumor suppressor gene 81040 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF341-C20orf144 ZNF341 chr20 33745299 + C20orf144 chr20 33663532 + Exonic hg38 ACC TCGA-OR-A5JT-01A 2 8 In-Frame Intra-chr q11.22 Transcription factor q11.22 Seq+ 81041 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYC1-DLK1 CYC1 chr8 144096010 + DLK1 chr14 100734465 + Exonic hg38 ACC TCGA-OR-A5JT-01A 1000 1000 Out-of-frame Inter-chr q24.3 q32.2 Tumor suppressor gene 81042 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL10-DLK1 RPL10 chrX 154400201 + DLK1 chr14 100728950 + Exonic hg38 ACC TCGA-OR-A5JT-01A 1000 1000 Out-of-frame Inter-chr q28 Tumor suppressor gene q32.2 Tumor suppressor gene 81043 ChimerSeq TCGA FAWG TCGA_RNA-Seq NKAIN4-IGF2 NKAIN4 chr20 63240784 - IGF2 chr11 2132154 - Exonic hg38 ACC TCGA-OR-A5JT-01A 1000 1000 3'UTR-3'UTR Inter-chr q13.33 p15.5 Oncogene 81044 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRV1-CLPTM1L ADGRV1 chr5 90985522 + CLPTM1L chr5 1318453 - Exonic hg38 ACC TCGA-OR-A5JV-01A 52 246 CDS-3'UTR Intra-chr q14.3 p15.33 Seq+ 81045 ChimerSeq TCGA FAWG TCGA_RNA-Seq APC-REEP2 APC chr5 112801383 + REEP2 chr5 138445683 + Exonic hg38 ACC TCGA-OR-A5JX-01A 1 8 In-Frame Intra-chr q22.2 Oncogene Tumor suppressor gene q31.2 Seq+ 81046 ChimerSeq TCGA FAWG TCGA_RNA-Seq GABRA5-NOV GABRA5 chr15 26869334 + NOV chr8 119416386 + Exonic hg38 ACC TCGA-OR-A5JY-01A 34 244 Out-of-frame Inter-chr q12 q24.12 Tumor suppressor gene Seq+ 81047 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREB3L2-CPA2 CREB3L2 chr7 138001604 - CPA2 chr7 130282104 + Exonic hg38 ACC TCGA-OR-A5JY-01A 30 97 In-Frame Intra-chr q33 Transcription factor q32.2 Seq+ 81048 ChimerSeq TCGA FAWG TCGA_RNA-Seq COMT-YPEL1 COMT chr22 19964299 + YPEL1 chr22 21710908 - Exonic hg38 ACC TCGA-OR-A5JY-01A 10 58 CDS-5'UTR Intra-chr q11.21 q11.22 Seq+ 81049 ChimerSeq TCGA FAWG TCGA_RNA-Seq HPS4-CABIN1 HPS4 chr22 26479265 - CABIN1 chr22 24164400 + Exonic hg38 ACC TCGA-OR-A5JY-01A 13 46 In-Frame Intra-chr q12.1 Seq+ 81050 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASCC3-TXNRD2 ASCC3 chr6 100604631 - TXNRD2 chr22 19941897 - Exonic hg38 ACC TCGA-OR-A5JY-01A 13 9 Out-of-frame Inter-chr q16.3 q11.21 81051 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2J1-CFAP206 UBE2J1 chr6 89352539 - CFAP206 chr6 87464020 + Exonic hg38 ACC TCGA-OR-A5JY-01A 4 29 Out-of-frame Intra-chr q15 q15 81052 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAFAH1B2-RRP7BP PAFAH1B2 chr11 117144418 + RRP7BP chr22 42580359 - Exonic hg38 ACC TCGA-OR-A5JY-01A 3 21 5'UTR-3'UTR Inter-chr q23.3 q13.2 81053 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGA-NUSAP1 MGA chr15 41699159 + NUSAP1 chr15 41349098 + Exonic hg38 ACC TCGA-OR-A5JY-01A 4 9 Out-of-frame Intra-chr q15.1 Transcription factor q15.1 Seq+ 81054 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGD4-SLCO1A2 FGD4 chr12 32399959 + SLCO1A2 chr12 21334709 - Exonic hg38 ACC TCGA-OR-A5JY-01A 2 16 CDS-5'UTR Intra-chr p11.21 p12.1 Seq+ 81055 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS26B-C15orf41 VPS26B chr11 134240155 + C15orf41 chr15 36644278 + Exonic hg38 ACC TCGA-OR-A5JY-01A 2 14 In-Frame Inter-chr q25 q14 Seq+ 81056 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBR2-PXT1 UBR2 chr6 42674193 + PXT1 chr6 36400584 - Exonic hg38 ACC TCGA-OR-A5JY-01A 1 17 Out-of-frame Intra-chr p21.1 p21.31 Seq+ 81057 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWOX-CDH3 WWOX chr16 78164289 + CDH3 chr16 68722425 + Exonic hg38 ACC TCGA-OR-A5JY-01A 2 11 CDS-3'UTR Intra-chr q23.1 Tumor suppressor gene q22.1 81058 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCTD18-PLCL1 KCTD18 chr2 200497753 - PLCL1 chr2 198355295 + Exonic hg38 ACC TCGA-OR-A5JY-01A 2 9 CDS-3'UTR Intra-chr q33.1 q33.1 81059 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKIB-BLK PKIB chr6 122633367 + BLK chr8 11561302 + Exonic hg38 ACC TCGA-OR-A5JY-01A 1 12 5'UTR-5'UTR Inter-chr q22.31 p23.1 TK:Src Seq+ 81060 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1XR1-ATG7 TBL1XR1 chr3 177160871 - ATG7 chr3 11554811 + Exonic hg38 ACC TCGA-OR-A5JY-01A 2 4 5'UTR-CDS Intra-chr q26.32 p25.3 Seq+ 81061 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIPH-EHHADH LIPH chr3 185552423 - EHHADH chr3 185193487 - Exonic hg38 ACC TCGA-OR-A5JY-01A 1 4 In-Frame Intra-chr q27.2 q27.2 81062 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBD3-PALM MBD3 chr19 1582622 - PALM chr19 726138 + Exonic hg38 ACC TCGA-OR-A5JY-01A 1 4 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 81063 ChimerSeq TCGA FAWG TCGA_RNA-Seq C5orf56-SGF29 C5orf56 chr5 132419940 + SGF29 chr16 28581055 + Exonic hg38 ACC TCGA-OR-A5JZ-01A 11 33 5'UTR-5'UTR Inter-chr q31.1 p11.2 81064 ChimerSeq TCGA FAWG TCGA_RNA-Seq MADD-POU2AF1 MADD chr11 47326858 + POU2AF1 chr11 111358882 - Exonic hg38 ACC TCGA-OR-A5JZ-01A 3 58 Out-of-frame Intra-chr p11.2 Tumor suppressor gene q23.1 Transcription factor 81065 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRFN5-SNORA31 LRFN5 chr14 41608562 + SNORA31 chr14 41594478 + Exonic hg38 ACC TCGA-OR-A5JZ-01A 3 15 5'UTR-3'UTR Intra-chr q21.1 q21.3 81066 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPEF2-C5orf42 SPEF2 chr5 35659207 + C5orf42 chr5 37224740 - Exonic hg38 ACC TCGA-OR-A5JZ-01A 2 6 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 81067 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBTPS1-SLC38A8 MBTPS1 chr16 84116735 - SLC38A8 chr16 84016727 - Exonic hg38 ACC TCGA-OR-A5K0-01A 35 76 5'UTR-CDS Intra-chr q24.1 q23.3 Seq+ 81068 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIC-SPATA33 NFIC chr19 3359685 + SPATA33 chr16 89669286 + Exonic hg38 ACC TCGA-OR-A5K2-01A 12 42 Out-of-frame Inter-chr p13.3 Transcription factor q24.3 81069 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICAL3-TPTEP1 MICAL3 chr22 17816690 - TPTEP1 chr22 16697496 + Exonic hg38 ACC TCGA-OR-A5K2-01A 1 7 CDS-3'UTR Intra-chr q11.21 q11.1 81070 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLCD2-LRP5 TLCD2 chr17 1709499 - LRP5 chr11 68409914 + Exonic hg38 ACC TCGA-OR-A5K2-01A 2 2 5'UTR-CDS Inter-chr q13.2 Seq+ 81071 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCMTD2-WASHC1 PCMTD2 chr20 64287821 + WASHC1 chr9 29739 - Exonic hg38 ACC TCGA-OR-A5K4-01A 1000 1000 3'UTR-5'UTR Inter-chr p24.3 81072 ChimerSeq TCGA FAWG TCGA_RNA-Seq OAZ1-AMH OAZ1 chr19 2269590 + AMH chr19 2250191 + Exonic hg38 ACC TCGA-OR-A5K5-01A 77 192 Out-of-frame Intra-chr p13.3 p13.3 Tumor suppressor gene Seq+ 81073 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIK3-CTNNBIP1 SIK3 chr11 117098143 - CTNNBIP1 chr1 9850776 - Exonic hg38 ACC TCGA-OR-A5K5-01A 15 83 Out-of-frame Inter-chr q23.3 p36.22 Tumor suppressor gene Seq+ 81074 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDLR-CCDC130 LDLR chr19 11089615 + CCDC130 chr19 13732175 + Exonic hg38 ACC TCGA-OR-A5K5-01A 9 79 CDS-5'UTR Intra-chr p13.2 p13.13 Seq+ 81075 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRK1-FANCD2 BRK1 chr3 10115819 + FANCD2 chr3 10096326 + Exonic hg38 ACC TCGA-OR-A5K5-01A 9 70 Out-of-frame Intra-chr p25.3 p25.3 Oncogene Seq+ 81076 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXNDC11-CIB4 TXNDC11 chr16 11736017 - CIB4 chr2 26640567 - Exonic hg38 ACC TCGA-OR-A5K5-01A 9 43 In-Frame Inter-chr p13.13 p23.3 Seq+ 81077 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB8A-PLVAP RAB8A chr19 16112025 + PLVAP chr19 17366195 - Exonic hg38 ACC TCGA-OR-A5K5-01A 7 42 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 81078 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC19-PCYT1A ZDHHC19 chr3 196207398 - PCYT1A chr3 196214498 - Exonic hg38 ACC TCGA-OR-A5K5-01A 4 50 3'UTR-3'UTR Intra-chr q29 q29 Seq+ 81079 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM87B-MERTK TMEM87B chr2 112060037 + MERTK chr2 112028351 + Exonic hg38 ACC TCGA-OR-A5K5-01A 4 23 Out-of-frame Intra-chr q13 q13 Seq+ 81080 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCMF1-RAB1A KCMF1 chr2 84971467 + RAB1A chr2 65098066 - Exonic hg38 ACC TCGA-OR-A5K5-01A 3 13 Out-of-frame Intra-chr p11.2 Transcription factor p14 Seq+ 81081 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSH5-BSCL2 MSH5 chr6 31759177 + BSCL2 chr11 62692797 - Exonic hg38 ACC TCGA-OR-A5K5-01A 4 9 3'UTR-3'UTR Inter-chr q12.3 Seq+ 81082 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP2-MSH5 SENP2 chr3 185599024 + MSH5 chr6 31758766 + Exonic hg38 ACC TCGA-OR-A5K5-01A 3 8 CDS-3'UTR Inter-chr q27.2 Seq+ 81083 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTRC-MICU1 BTRC chr10 101354228 + MICU1 chr10 72566794 - Exonic hg38 ACC TCGA-OR-A5K5-01A 2 7 CDS-5'UTR Intra-chr q24.32 q22.1 Seq+ 81084 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPRD1B-MEF2B RPRD1B chr20 38066256 + MEF2B chr19 19157142 - Exonic hg38 ACC TCGA-OR-A5K5-01A 1 10 CDS-5'UTR Inter-chr q11.23 p13.11 Transcription factor Seq+ 81085 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXNDC11-BAMBI TXNDC11 chr16 11742477 - BAMBI chr10 28681258 + Exonic hg38 ACC TCGA-OR-A5K5-01A 1 10 Out-of-frame Inter-chr p13.13 p12.1 Seq+ 81086 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARMC9-NPAS1 ARMC9 chr2 231198941 + NPAS1 chr19 47021006 + Exonic hg38 ACC TCGA-OR-A5K5-01A 1 9 5'UTR-5'UTR Inter-chr q37.1 q13.32 Transcription factor 81087 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPY30-MCU DPY30 chr2 31917926 - MCU chr10 72834359 + Exonic hg38 ACC TCGA-OR-A5K5-01A 1 9 3'UTR-CDS Inter-chr p22.3 q22.1 81088 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEMO1-MCU MEMO1 chr2 31917926 - MCU chr10 72834359 + Exonic hg38 ACC TCGA-OR-A5K5-01A 1 9 Out-of-frame Inter-chr p22.3 q22.1 81089 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1F-LRSAM1 MYO1F chr19 8577307 - LRSAM1 chr9 127451929 + Exonic hg38 ACC TCGA-OR-A5K5-01A 2 5 CDS-5'UTR Inter-chr p13.2 q33.3 Seq+ 81090 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H8-PARD3B ZC3H8 chr2 112230903 - PARD3B chr2 205158722 + Exonic hg38 ACC TCGA-OR-A5K5-01A 2 2 3'UTR-CDS Intra-chr q14.1 Transcription factor q33.3 Seq+ 81091 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRA10AC1-GCA FRA10AC1 chr10 93684056 - GCA chr2 162352338 + Exonic hg38 ACC TCGA-OR-A5K5-01A 1 3 Out-of-frame Inter-chr q23.33 q24.2 81092 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNMA1-SERTAD1 KCNMA1 chr10 77637265 - SERTAD1 chr19 40423546 - Exonic hg38 ACC TCGA-OR-A5K5-01A 1 3 CDS-5'UTR Inter-chr q22.3 q13.2 81093 ChimerSeq TCGA FAWG TCGA_RNA-Seq MINDY3-CRYGD MINDY3 chr10 15843212 - CRYGD chr2 208124354 - Exonic hg38 ACC TCGA-OR-A5K5-01A 1 2 5'UTR-5'UTR Inter-chr p13 q33.3 81094 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM182-SCN3A TMEM182 chr2 102764427 + SCN3A chr2 165164520 - Exonic hg38 ACC TCGA-OR-A5K5-01A 1 2 Out-of-frame Intra-chr q12.1 q24.3 81095 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERN1-TEX2 ERN1 chr17 64063986 - TEX2 chr17 64160933 - Exonic hg38 ACC TCGA-OR-A5K6-01A 26 236 In-Frame Intra-chr q23.3 q23.3 Seq+ 81096 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD52-RASSF3 ANKRD52 chr12 56243238 - RASSF3 chr12 64691470 + Exonic hg38 ACC TCGA-OR-A5K9-01A 9 39 In-Frame Intra-chr q13.3 q14.2 Tumor suppressor gene Seq+ 81097 ChimerSeq TCGA FAWG TCGA_RNA-Seq OLFM2-PLEKHG4B OLFM2 chr19 9936304 - PLEKHG4B chr5 113251 + Exonic hg38 ACC TCGA-OR-A5K9-01A 5 31 In-Frame Inter-chr p13.2 p15.33 81098 ChimerSeq TCGA FAWG TCGA_RNA-Seq PALM-SGTA PALM chr19 719657 + SGTA chr19 2769091 - Exonic hg38 ACC TCGA-OR-A5K9-01A 1 21 CDS-5'UTR Intra-chr p13.3 p13.3 81099 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLLT1-PRLR MLLT1 chr19 6270579 - PRLR chr5 35118122 - Exonic hg38 ACC TCGA-OR-A5K9-01A 1 9 CDS-5'UTR Inter-chr p13.3 p13.2 Seq+ 81100 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM19A2-IKZF4 FAM19A2 chr12 62191259 - IKZF4 chr12 56025054 + Exonic hg38 ACC TCGA-OR-A5K9-01A 1 6 Out-of-frame Intra-chr q14.1 q13.2 Transcription factor Seq+ 81101 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD52-DYRK2 ANKRD52 chr12 56247493 - DYRK2 chr12 67657106 + Exonic hg38 ACC TCGA-OR-A5K9-01A 1 3 In-Frame Intra-chr q13.3 q15 CMGC:DYRK Seq+ 81102 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUGP1-CASP14 SUGP1 chr19 19316422 - CASP14 chr19 15052206 + Exonic hg38 ACC TCGA-OR-A5K9-01A 1 1 CDS-5'UTR Intra-chr p13.11 p13.12 81103 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNJ2-COX4I1 SYNJ2 chr6 158068728 + COX4I1 chr16 85806827 + Exonic hg38 ACC TCGA-OR-A5KO-01A 4 4 Out-of-frame Inter-chr q25.3 q24.1 Seq+ 81104 ChimerSeq TCGA FAWG TCGA_RNA-Seq NT5DC1-SLC35F1 NT5DC1 chr6 116117945 + SLC35F1 chr6 118266995 + Exonic hg38 ACC TCGA-OR-A5KO-01A 1 7 Out-of-frame Intra-chr q22.1 q22.2 Seq+ 81105 ChimerSeq TCGA FAWG TCGA_RNA-Seq FLYWCH1-TVP23A FLYWCH1 chr16 2940092 + TVP23A chr16 10818768 - Exonic hg38 ACC TCGA-OR-A5KO-01A 1000 1000 CDS-5'UTR Intra-chr p13.3 Transcription factor p13.13 81106 ChimerSeq TCGA FAWG TCGA_RNA-Seq PYM1-SLC16A7 PYM1 chr12 55903387 - SLC16A7 chr12 59779423 + Exonic hg38 ACC TCGA-OR-A5KT-01A 18 80 Out-of-frame Intra-chr q13.2 q14.1 81107 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC16A7-SARNP SLC16A7 chr12 59596236 + SARNP chr12 55760640 - Exonic hg38 ACC TCGA-OR-A5KT-01A 15 28 5'UTR-CDS Intra-chr q14.1 q13.2 Seq+ 81108 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPATS2-TSPAN8 SPATS2 chr12 49514613 + TSPAN8 chr12 71139848 - Exonic hg38 ACC TCGA-OR-A5KT-01A 1 6 Out-of-frame Intra-chr q13.12 q21.1 Seq+ 81109 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM6A-FUNDC1 KDM6A chrX 44974715 + FUNDC1 chrX 44542101 - Exonic hg38 ACC TCGA-OR-A5KV-01A 47 405 Out-of-frame Intra-chr p11.3 Oncogene Tumor suppressor gene p11.3 Seq+ 81110 ChimerSeq TCGA FAWG TCGA_RNA-Seq JADE3-SSX2 JADE3 chrX 47058345 + SSX2 chrX 52700578 - Exonic hg38 ACC TCGA-OR-A5KV-01A 38 214 CDS-5'UTR Intra-chr p11.3 p11.22 81111 ChimerSeq TCGA FAWG TCGA_RNA-Seq REPS2-APOO REPS2 chrX 16947134 + APOO chrX 23880952 - Exonic hg38 ACC TCGA-OR-A5KV-01A 3 6 In-Frame Intra-chr p22.2 p22.11 Seq+ 81112 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNL3L-PAGE5 GNL3L chrX 54532585 + PAGE5 chrX 55221375 + Exonic hg38 ACC TCGA-OR-A5KV-01A 1 4 In-Frame Intra-chr p11.22 p11.21 81113 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRMS1L-ZNF839 BRMS1L chr14 35834923 + ZNF839 chr14 102338816 + Exonic hg38 ACC TCGA-OR-A5KW-01A 2 17 In-Frame Intra-chr q13.2 q32.31 Seq+ 81114 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARFGAP2-PACSIN3 ARFGAP2 chr11 47171426 - PACSIN3 chr11 47178487 - Exonic hg38 ACC TCGA-OR-A5KW-01A 1 2 In-Frame Intra-chr p11.2 p11.2 81115 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP23-RPL23 ARHGAP23 chr17 38482678 + RPL23 chr17 38853105 - Exonic hg38 ACC TCGA-OR-A5KX-01A 6 24 3'UTR-CDS Intra-chr q12 q12 Seq+ 81116 ChimerSeq TCGA FAWG TCGA_RNA-Seq FN3KRP-KCNQ1 FN3KRP chr17 82726602 + KCNQ1 chr11 2847767 + Exonic hg38 ACC TCGA-OR-A5KX-01A 3 34 CDS-3'UTR Inter-chr q25.3 p15.5 Seq+ 81117 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R16A-SLC52A2 PPP1R16A chr8 144490212 + SLC52A2 chr8 144360115 + Exonic hg38 ACC TCGA-OR-A5KX-01A 4 26 5'UTR-3'UTR Intra-chr q24.3 q24.3 Seq+ 81118 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP3R1-WDR92 PPP3R1 chr2 68252125 - WDR92 chr2 68144715 - Exonic hg38 ACC TCGA-OR-A5KX-01A 5 9 Out-of-frame Intra-chr p14 p14 Seq+ 81119 ChimerSeq TCGA FAWG TCGA_RNA-Seq FKBP8-HAUS8 FKBP8 chr19 18541679 - HAUS8 chr19 17073335 - Exonic hg38 ACC TCGA-OR-A5KX-01A 4 9 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 81120 ChimerSeq TCGA FAWG TCGA_RNA-Seq GIPC1-CYP4F22 GIPC1 chr19 14491656 - CYP4F22 chr19 15548108 + Exonic hg38 ACC TCGA-OR-A5KX-01A 1 12 5'UTR-CDS Intra-chr p13.12 p13.12 81121 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF626-ADGRE5 ZNF626 chr19 20661444 - ADGRE5 chr19 14388450 + Exonic hg38 ACC TCGA-OR-A5KX-01A 1 12 Out-of-frame Intra-chr p12 Transcription factor p13.12 81122 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH12-BNIP3L CDH12 chr5 22505270 - BNIP3L chr8 26505307 + Exonic hg38 ACC TCGA-OR-A5KX-01A 1 11 5'UTR-3'UTR Inter-chr p14.3 p21.2 Tumor suppressor gene Seq+ 81123 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRLR-CDH12 PRLR chr5 35118061 - CDH12 chr5 22505364 - Exonic hg38 ACC TCGA-OR-A5KX-01A 1 10 5'UTR-5'UTR Intra-chr p13.2 p14.3 Seq+ 81124 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK12-LRRC37A11P CDK12 chr17 39463117 + LRRC37A11P chr17 39034170 + Exonic hg38 ACC TCGA-OR-A5KX-01A 1 9 CDS-5'UTR Intra-chr q12 Oncogene q12 81125 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASF1B-GIPC1 ASF1B chr19 14136348 - GIPC1 chr19 14491743 - Exonic hg38 ACC TCGA-OR-A5KX-01A 1 5 CDS-5'UTR Intra-chr p13.12 p13.12 81126 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC21-SGCZ DNAJC21 chr5 34929916 + SGCZ chr8 14324204 - Exonic hg38 ACC TCGA-OR-A5KX-01A 1 5 Out-of-frame Inter-chr p13.2 p22 Seq+ 81127 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD3-RAD51C CHD3 chr17 7893935 + RAD51C chr17 58709859 + Exonic hg38 ACC TCGA-OR-A5KY-01A 17 88 In-Frame Intra-chr p13.1 q22 Tumor suppressor gene Seq+ 81128 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R37-BCAM PPP1R37 chr19 45093527 + BCAM chr19 44811225 + Exonic hg38 ACC TCGA-OR-A5KY-01A 14 54 In-Frame Intra-chr q13.32 q13.32 Seq+ 81129 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALT5-ASIP B4GALT5 chr20 49713576 - ASIP chr20 34260365 + Exonic hg38 ACC TCGA-OR-A5KY-01A 12 32 CDS-5'UTR Intra-chr q13.13 q11.22 Seq+ 81130 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN18-PIK3R2 TSPAN18 chr11 44727287 + PIK3R2 chr19 18166160 + Exonic hg38 ACC TCGA-OR-A5KY-01A 8 37 5'UTR-5'UTR Inter-chr p11.2 p13.11 Oncogene Seq+ 81131 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASB3-MTA3 ASB3 chr2 53786821 - MTA3 chr2 42640173 + Exonic hg38 ACC TCGA-OR-A5KY-01A 4 15 5'UTR-CDS Intra-chr p16.2 p21 Seq+ 81132 ChimerSeq TCGA FAWG TCGA_RNA-Seq FHOD3-ESRRB FHOD3 chr18 36372744 + ESRRB chr14 76482016 + Exonic hg38 ACC TCGA-OR-A5KY-01A 2 22 In-Frame Inter-chr q12.2 q24.3 Tumor suppressor gene Transcription factor Seq+ 81133 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDH3A2-EIF5A ALDH3A2 chr17 19671956 + EIF5A chr17 7309615 + Exonic hg38 ACC TCGA-OR-A5KY-01A 2 21 In-Frame Intra-chr p11.2 p13.1 Seq+ 81134 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMBRA1-LRP4 AMBRA1 chr11 46493608 - LRP4 chr11 46876830 - Exonic hg38 ACC TCGA-OR-A5KY-01A 1 21 In-Frame Intra-chr p11.2 p11.2 Seq+ 81135 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHSA2-C2orf74 AHSA2 chr2 61186497 + C2orf74 chr2 61162842 + Exonic hg38 ACC TCGA-OR-A5KY-01A 3 10 Out-of-frame Intra-chr p15 p15 Seq+ 81136 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM248-ATOH8 TMEM248 chr7 66942024 + ATOH8 chr2 85763991 + Exonic hg38 ACC TCGA-OR-A5KY-01A 2 12 In-Frame Inter-chr q11.21 p11.2 Transcription factor Seq+ 81137 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDH2-ACTB ALDH2 chr12 111798242 + ACTB chr7 5529663 - Exonic hg38 ACC TCGA-OR-A5KY-01A 1 10 CDS-5'UTR Inter-chr q24.12 p22.1 81138 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDNEP1-SHBG CTDNEP1 chr17 7246026 - SHBG chr17 7630416 + Exonic hg38 ACC TCGA-OR-A5KY-01A 1 2 Out-of-frame Intra-chr p13.1 p13.1 81139 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS41-CEP41 VPS41 chr7 38754702 - CEP41 chr7 130428018 - Exonic hg38 ACC TCGA-OR-A5KZ-01A 3 23 In-Frame Intra-chr p14.1 q32.2 Seq+ 81140 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBR2-NDUFS2 UBR2 chr6 42642481 + NDUFS2 chr1 161214156 + Exonic hg38 ACC TCGA-OR-A5KZ-01A 1 1 Out-of-frame Inter-chr p21.1 q23.3 81141 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLBD2-CIDEC PLBD2 chr12 113358890 + CIDEC chr3 9878511 - Exonic hg38 ACC TCGA-OR-A5L6-01A 25 95 In-Frame Inter-chr q24.13 p25.3 Seq+ 81142 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLK1-NAPRT CLK1 chr2 200854616 - NAPRT chr8 143577943 - Exonic hg38 ACC TCGA-OR-A5L6-01A 11 82 CDS-5'UTR Inter-chr q33.1 CMGC:CLK 81143 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM19A4-TMF1 FAM19A4 chr3 68880730 - TMF1 chr3 69048562 - Exonic hg38 ACC TCGA-OR-A5LB-01A 14 63 Out-of-frame Intra-chr p14.1 p14.1 Transcription factor Seq+ 81144 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMBR1-CHMP1A LMBR1 chr7 156724112 - CHMP1A chr16 89647331 - Exonic hg38 ACC TCGA-OR-A5LB-01A 2 1 In-Frame Inter-chr q36.3 q24.3 Seq+ 81145 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZXDC-UROC1 ZXDC chr3 126466155 - UROC1 chr3 126482485 - Exonic hg38 ACC TCGA-OR-A5LD-01A 3 10 Out-of-frame Intra-chr q21.3 Transcription factor q21.3 Seq+ 81146 ChimerSeq TCGA FAWG TCGA_RNA-Seq AUTS2-CDH8 AUTS2 chr7 70698620 + CDH8 chr16 61901473 - Exonic hg38 ACC TCGA-OR-A5LD-01A 1 5 Out-of-frame Inter-chr q11.22 q21 81147 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF18B-C1QL1 KIF18B chr17 44947628 - C1QL1 chr17 44960367 - Exonic hg38 ACC TCGA-OR-A5LD-01A 1 3 5'UTR-CDS Intra-chr q21.31 q21.31 Seq+ 81148 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC117-TNNI2 CCDC117 chr22 28773025 + TNNI2 chr11 1841272 + Exonic hg38 ACC TCGA-OR-A5LE-01A 31 76 Out-of-frame Inter-chr q12.1 p15.5 Seq+ 81149 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K9-MED6 MAP3K9 chr14 70749933 - MED6 chr14 70593378 - Exonic hg38 ACC TCGA-OR-A5LG-01A 3 33 In-Frame Intra-chr q24.2 q24.2 Seq+ 81150 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED6-MAP3K9 MED6 chr14 70596611 - MAP3K9 chr14 70761182 - Exonic hg38 ACC TCGA-OR-A5LG-01A 2 22 In-Frame Intra-chr q24.2 q24.2 Seq+ 81151 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNS1-AS2 TNS1 chr2 217835091 - AS2 chr2 218327959 - Exonic hg38 ACC TCGA-OR-A5LJ-01A 4 53 Out-of-frame Intra-chr q35 81152 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH2NL-FCGR3B NOTCH2NL chr1 146228709 - FCGR3B chr1 161630388 - Exonic hg38 ACC TCGA-OR-A5LL-01A 5 48 Out-of-frame Intra-chr q21.1 q23.3 Seq+ 81153 ChimerSeq TCGA FAWG TCGA_RNA-Seq MMACHC-TTC23L MMACHC chr1 45500413 + TTC23L chr5 34896770 + Exonic hg38 ACC TCGA-OR-A5LL-01A 1 9 In-Frame Inter-chr p34.1 p13.2 Seq+ 81154 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF616-TRAPPC8 ZNF616 chr19 52130501 - TRAPPC8 chr18 31931523 - Exonic hg38 ACC TCGA-OR-A5LL-01A 1 4 Out-of-frame Inter-chr q13.41 Transcription factor q12.1 Seq+ 81155 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMTR1-SMIM13 CMTR1 chr6 37473601 + SMIM13 chr6 11134403 + Exonic hg38 ACC TCGA-OR-A5LM-01A 3 24 Out-of-frame Intra-chr p21.2 p24.2 81156 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELF1-FNBP4 CELF1 chr11 47483453 - FNBP4 chr11 47720086 - Exonic hg38 ACC TCGA-OR-A5LO-01A 18 123 CDS-5'UTR Intra-chr p11.2 p11.2 Seq+ 81157 ChimerSeq TCGA FAWG TCGA_RNA-Seq QRICH1-ACOT2 QRICH1 chr3 49076709 - ACOT2 chr14 73574908 + Exonic hg38 ACC TCGA-OR-A5LO-01A 5 146 In-Frame Inter-chr p21.31 q24.3 Seq+ 81158 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCN2-COL5A1 FCN2 chr9 134886564 + COL5A1 chr9 134822998 + Exonic hg38 ACC TCGA-OR-A5LO-01A 12 42 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 81159 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS26A-KIF1BP VPS26A chr10 69133047 + KIF1BP chr10 69041564 + Exonic hg38 ACC TCGA-OR-A5LO-01A 12 37 CDS-3'UTR Intra-chr q22.1 q22.1 81160 ChimerSeq TCGA FAWG TCGA_RNA-Seq MINOS1-GSE1 MINOS1 chr1 19597109 + GSE1 chr16 85665976 + Exonic hg38 ACC TCGA-OR-A5LO-01A 11 28 Out-of-frame Inter-chr p36.13 q24.1 Seq+ 81161 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB40C-PRR35 RAB40C chr16 618260 + PRR35 chr16 563256 + Exonic hg38 ACC TCGA-OR-A5LO-01A 2 61 CDS-5'UTR Intra-chr p13.3 p13.3 81162 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGPEP1-ALPL PGPEP1 chr19 18342911 + ALPL chr1 21553978 + Exonic hg38 ACC TCGA-OR-A5LO-01A 7 40 5'UTR-5'UTR Inter-chr p13.11 p36.12 Tumor suppressor gene Seq+ 81163 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASSF3-DAZAP2 RASSF3 chr12 64610743 + DAZAP2 chr12 51240343 + Exonic hg38 ACC TCGA-OR-A5LO-01A 4 21 Out-of-frame Intra-chr q14.2 Tumor suppressor gene q13.13 Seq+ 81164 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXO3-LACE1 FOXO3 chr6 108561829 + LACE1 chr6 108519697 + Exonic hg38 ACC TCGA-OR-A5LO-01A 3 11 Out-of-frame Intra-chr q21 Oncogene Tumor suppressor gene Transcription factor Seq+ 81165 ChimerSeq TCGA FAWG TCGA_RNA-Seq GBF1-NOLC1 GBF1 chr10 102370860 + NOLC1 chr10 102159193 + Exonic hg38 ACC TCGA-OR-A5LO-01A 3 8 Out-of-frame Intra-chr q24.32 q24.32 Seq+ 81166 ChimerSeq TCGA FAWG TCGA_RNA-Seq WRAP53-AHCY WRAP53 chr17 7689701 + AHCY chr20 34281165 - Exonic hg38 ACC TCGA-OR-A5LO-01A 2 11 In-Frame Inter-chr p13.1 q11.22 Seq+ 81167 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMIP-BCO1 CMIP chr16 81445541 + BCO1 chr16 81262136 + Exonic hg38 ACC TCGA-OR-A5LO-01A 2 7 Out-of-frame Intra-chr q23.2 q23.2 81168 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP1B1-RFPL1S AP1B1 chr22 29342285 - RFPL1S chr22 29442129 - Exonic hg38 ACC TCGA-OR-A5LO-01A 2 5 5'UTR-5'UTR Intra-chr q12.2 q12.2 81169 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXK2-TNFSF13 FOXK2 chr17 82520307 + TNFSF13 chr17 7559846 + Exonic hg38 ACC TCGA-OR-A5LO-01A 1 9 Out-of-frame Intra-chr q25.3 Transcription factor p13.1 81170 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPZB-MUC22 CAPZB chr1 19485436 - MUC22 chr6 31025502 + Exonic hg38 ACC TCGA-OR-A5LO-01A 2 4 CDS-3'UTR Inter-chr p36.13 p21.33 81171 ChimerSeq TCGA FAWG TCGA_RNA-Seq REPS2-TXLNG REPS2 chrX 17006344 + TXLNG chrX 16818574 + Exonic hg38 ACC TCGA-OR-A5LO-01A 2 4 Out-of-frame Intra-chr p22.2 p22.2 Seq+ 81172 ChimerSeq TCGA FAWG TCGA_RNA-Seq TYW1B-STX5 TYW1B chr7 72826855 - STX5 chr11 62807628 - Exonic hg38 ACC TCGA-OR-A5LR-01A 1 5 Out-of-frame Inter-chr q11.23 q12.3 81173 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL6R-TDRD10 IL6R chr1 154435156 + TDRD10 chr1 154547409 + Exonic hg38 ACC TCGA-OR-A5LS-01A 2 20 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 81174 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPA2B1-HSD17B10 HNRNPA2B1 chr7 26200572 - HSD17B10 chrX 53433886 - Exonic hg38 ACC TCGA-OU-A5PI-01A 5 10 In-Frame Inter-chr p15.2 p11.22 Seq+ 81175 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST3GAL2-VAC14 ST3GAL2 chr16 70438949 - VAC14 chr16 70772172 - Exonic hg38 ACC TCGA-OU-A5PI-01A 5 6 5'UTR-CDS Intra-chr q22.1 q22.2 Seq+ 81176 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCB1-WTIP PLCB1 chr20 8757178 + WTIP chr19 34490376 + Exonic hg38 ACC TCGA-OU-A5PI-01A 2 6 In-Frame Inter-chr p12.3 q13.11 Seq+ 81177 ChimerSeq TCGA FAWG TCGA_RNA-Seq CC2D2A-BST1 CC2D2A chr4 15480827 + BST1 chr4 15711807 + Exonic hg38 ACC TCGA-OU-A5PI-01A 2 1 In-Frame Intra-chr p15.32 p15.32 Seq+ 81178 ChimerSeq TCGA FAWG TCGA_RNA-Seq YPEL3-EXD3 YPEL3 chr16 30095252 - EXD3 chr9 137324143 - Exonic hg38 ACC TCGA-P6-A5OF-01A 25 125 In-Frame Inter-chr p11.2 Tumor suppressor gene q34.3 Seq+ 81179 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCP2-IL17B DCP2 chr5 112992770 + IL17B chr5 149377025 - Exonic hg38 ACC TCGA-P6-A5OF-01A 8 24 In-Frame Intra-chr q22.2 q32 Seq+ 81180 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNB1-TSC2 GNB1 chr1 1839190 - TSC2 chr16 2079032 + Exonic hg38 ACC TCGA-P6-A5OF-01A 5 17 5'UTR-CDS Inter-chr p36.33 p13.3 Oncogene Tumor suppressor gene Seq+ 81181 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPSF1-TONSL CPSF1 chr8 144400924 - TONSL chr8 144429336 - Exonic hg38 ACC TCGA-P6-A5OF-01A 1 7 5'UTR-5'UTR Intra-chr q24.3 q24.3 81182 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASB4-DYNC1I1 ASB4 chr7 95536550 + DYNC1I1 chr7 95804721 + Exonic hg38 ACC TCGA-P6-A5OF-01A 2 2 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 81183 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNQ1-DUSP8 KCNQ1 chr11 2778037 + DUSP8 chr11 1565934 - Exonic hg38 ACC TCGA-PA-A5YG-01A 11 73 3'UTR-5'UTR Intra-chr p15.5 Seq+ 81184 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC4-IGF2 DNAJC4 chr11 64232477 + IGF2 chr11 2131698 - Exonic hg38 ACC TCGA-PK-A5H8-01A 6 1 Out-of-frame Intra-chr q13.1 p15.5 Oncogene 81185 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAMSTR-IGF2 MAMSTR chr19 48715832 - IGF2 chr11 2131700 - Exonic hg38 ACC TCGA-PK-A5H8-01A 3 3 Out-of-frame Inter-chr q13.33 p15.5 Oncogene 81186 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARAP1-IGF2 ARAP1 chr11 72722065 - IGF2 chr11 2132106 - Exonic hg38 ACC TCGA-PK-A5H9-01A 1000 1000 Out-of-frame Intra-chr q13.4 p15.5 Oncogene 81187 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLUH-IGF2 CLUH chr17 2689386 - IGF2 chr11 2139208 - Exonic hg38 ACC TCGA-PK-A5H9-01A 1000 1000 Out-of-frame Inter-chr p13.3 p15.5 Oncogene 81188 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT2-IGF2 GALNT2 chr1 230255303 + IGF2 chr11 2131760 - Exonic hg38 ACC TCGA-PK-A5H9-01A 1000 1000 Out-of-frame Inter-chr q42.13 p15.5 Oncogene 81189 ChimerSeq TCGA FAWG TCGA_RNA-Seq RCC1L-DENND1A RCC1L chr7 75052711 - DENND1A chr9 123403490 - Exonic hg38 ACC TCGA-PK-A5HA-01A 9 64 In-Frame Inter-chr q11.23 q33.3 81190 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCCC1-LAMP3 MCCC1 chr3 183086693 - LAMP3 chr3 183154391 - Exonic hg38 ACC TCGA-PK-A5HA-01A 4 5 Out-of-frame Intra-chr q27.1 q27.1 Seq+ 81191 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPIP5K1-FRMD5 PPIP5K1 chr15 43534974 - FRMD5 chr15 43888872 - Exonic hg38 ACC TCGA-PK-A5HA-01A 3 7 Out-of-frame Intra-chr q15.3 q15.3 Seq+ 81192 ChimerSeq TCGA FAWG TCGA_RNA-Seq PXK-RPP14 PXK chr3 58333090 + RPP14 chr3 58310507 + Exonic hg38 ACC TCGA-PK-A5HA-01A 1 13 Out-of-frame Intra-chr p14.3 p14.3 Seq+ 81193 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP85-TMEM94 NUP85 chr17 75205794 + TMEM94 chr17 75471800 + Exonic hg38 ACC TCGA-PK-A5HA-01A 1 12 5'UTR-5'UTR Intra-chr q25.1 q25.1 81194 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA6C-VPS72 SEMA6C chr1 151139976 - VPS72 chr1 151185950 - Exonic hg38 ACC TCGA-PK-A5HA-01A 1 4 Out-of-frame Intra-chr q21.3 q21.3 81195 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUSC2-U82695.5 RUSC2 chr9 35490172 + U82695.5 chrX 153398920 - Exonic hg38 ACC TCGA-PK-A5HB-01A 33 45 Out-of-frame Inter-chr p13.3 81196 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRP7A-PACSIN2 RRP7A chr22 42518005 - PACSIN2 chr22 42879169 - Exonic hg38 ACC TCGA-PK-A5HB-01A 8 133 In-Frame Intra-chr q13.2 q13.2 Seq+ 81197 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSGA10-ZRANB3 TSGA10 chr2 99154837 - ZRANB3 chr2 135224517 - Exonic hg38 ACC TCGA-PK-A5HB-01A 1 5 3'UTR-CDS Intra-chr q11.2 q21.3 81198 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOGARAM1-KCNK13 TOGARAM1 chr14 45054549 + KCNK13 chr14 90184111 + Exonic hg38 BLCA TCGA-2F-A9KO-01A 7 7 Out-of-frame Intra-chr q21.2 q32.11 81199 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHPK-GUCY1A2 SHPK chr17 3630205 - GUCY1A2 chr11 106986131 - Exonic hg38 BLCA TCGA-2F-A9KO-01A 1 9 Out-of-frame Inter-chr p13.2 q22.3 Oncogene Seq+ 81200 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUDT2-UBAP1 NUDT2 chr9 34339166 + UBAP1 chr9 34249779 + Exonic hg38 BLCA TCGA-2F-A9KO-01A 1 4 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 81201 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41-HGSNAT EPB41 chr1 28997319 + HGSNAT chr8 43158575 + Exonic hg38 BLCA TCGA-2F-A9KP-01A 51 152 In-Frame Inter-chr p35.3 Tumor suppressor gene p11.21 Seq+ 81202 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYS1-IDO2 SYS1 chr20 45365686 + IDO2 chr8 40015247 + Exonic hg38 BLCA TCGA-2F-A9KP-01A 21 109 Out-of-frame Inter-chr q13.12 p11.21 Seq+ 81203 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP188-TMEM8C NUP188 chr9 129006368 + TMEM8C chr9 133514785 - Exonic hg38 BLCA TCGA-2F-A9KP-01A 8 88 Out-of-frame Intra-chr q34.11 q34.2 Seq+ 81204 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF21A-NUTF2 PHF21A chr11 46076754 - NUTF2 chr16 67868340 + Exonic hg38 BLCA TCGA-2F-A9KP-01A 21 31 In-Frame Inter-chr p11.2 Transcription factor q22.1 Seq+ 81205 ChimerSeq TCGA FAWG TCGA_RNA-Seq IP6K1-MON1A IP6K1 chr3 49738212 - MON1A chr3 49913359 - Exonic hg38 BLCA TCGA-2F-A9KP-01A 17 42 In-Frame Intra-chr p21.31 p21.31 Seq+ 81206 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST3GAL3-ZMAT4 ST3GAL3 chr1 43736380 + ZMAT4 chr8 40532238 - Exonic hg38 BLCA TCGA-2F-A9KP-01A 11 35 Out-of-frame Inter-chr p34.1 p11.21 Transcription factor Seq+ 81207 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRMT61A-AMN TRMT61A chr14 103530309 + AMN chr14 102928426 + Exonic hg38 BLCA TCGA-2F-A9KP-01A 5 14 Out-of-frame Intra-chr q32.33 q32.32 Seq+ 81208 ChimerSeq TCGA FAWG TCGA_RNA-Seq GBF1-UBE2R2 GBF1 chr10 102344182 + UBE2R2 chr9 33886881 + Exonic hg38 BLCA TCGA-2F-A9KP-01A 4 16 Out-of-frame Inter-chr q24.32 p13.3 Seq+ 81209 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA5A-MYHAS SEMA5A chr5 9437756 - MYHAS chr17 10608354 + Exonic hg38 BLCA TCGA-2F-A9KP-01A 2 20 5'UTR-5'UTR Inter-chr p15.31 p13.1 81210 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAF1-IQSEC1 RAF1 chr3 12663813 - IQSEC1 chr3 12941865 - Exonic hg38 BLCA TCGA-2F-A9KP-01A 2 15 5'UTR-5'UTR Intra-chr p25.2 TKL:RAF Oncogene p25.2 Seq+ 81211 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR59-CHST5 WDR59 chr16 74888169 - CHST5 chr16 75533183 - Exonic hg38 BLCA TCGA-2F-A9KP-01A 4 5 CDS-5'UTR Intra-chr q23.1 q23.1 Seq+ 81212 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABHD17C-PRAMEF6 ABHD17C chr15 80696019 + PRAMEF6 chr1 12942540 - Exonic hg38 BLCA TCGA-2F-A9KP-01A 2 5 CDS-3'UTR Inter-chr q25.1 81213 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF326-CCDC18 ZNF326 chr1 89995273 + CCDC18 chr1 93226333 + Exonic hg38 BLCA TCGA-2F-A9KR-01A 17 75 Out-of-frame Intra-chr p22.2 Transcription factor p22.1 Seq+ 81214 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSI2-BCAS3 MSI2 chr17 57652161 + BCAS3 chr17 60808004 + Exonic hg38 BLCA TCGA-2F-A9KR-01A 4 14 In-Frame Intra-chr q22 q23.2 Seq+ 81215 ChimerSeq TCGA FAWG TCGA_RNA-Seq OGT-GCNA OGT chrX 71554591 + GCNA chrX 71592121 + Exonic hg38 BLCA TCGA-2F-A9KR-01A 1000 1000 Out-of-frame Intra-chr q13.1 q13.1 81216 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSTP1-ELP4 GSTP1 chr11 67586537 + ELP4 chr11 31650115 + Exonic hg38 BLCA TCGA-2F-A9KT-01A 12 18 In-Frame Intra-chr q13.2 Tumor suppressor gene p13 Seq+ 81217 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC42BPG-EHD1 CDC42BPG chr11 64844410 - EHD1 chr11 64860336 - Exonic hg38 BLCA TCGA-2F-A9KT-01A 5 7 In-Frame Intra-chr q13.1 q13.1 Seq+ 81218 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX35-MYO7A DHX35 chr20 39001842 + MYO7A chr11 77197481 + Exonic hg38 BLCA TCGA-2F-A9KT-01A 4 4 Out-of-frame Inter-chr q11.23 q13.5 Seq+ 81219 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNA1I-SYNGR1 CACNA1I chr22 39673082 + SYNGR1 chr22 39381696 + Exonic hg38 BLCA TCGA-2F-A9KT-01A 2 7 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 81220 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPRL3-UBE2L3 NPRL3 chr16 86668 - UBE2L3 chr22 21621515 + Exonic hg38 BLCA TCGA-2F-A9KT-01A 2 5 3'UTR-CDS Inter-chr p13.3 q11.21 81221 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIMCH1-UCHL1 LIMCH1 chr4 41360936 + UCHL1 chr4 41264103 + Exonic hg38 BLCA TCGA-2F-A9KW-01A 30 380 Out-of-frame Intra-chr p13 p13 Tumor suppressor gene Seq+ 81222 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDS1-UGT1A6 CDS1 chr4 84609525 + UGT1A6 chr2 233767034 + Exonic hg38 BLCA TCGA-2F-A9KW-01A 26 53 In-Frame Inter-chr q21.23 Tumor suppressor gene q37.1 Seq+ 81223 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDS1-UGT1A1 CDS1 chr4 84609525 + UGT1A1 chr2 233767034 + Exonic hg38 BLCA TCGA-2F-A9KW-01A 26 48 In-Frame Inter-chr q21.23 Tumor suppressor gene q37.1 Oncogene Seq+ 81224 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDS1-UGT1A10 CDS1 chr4 84609525 + UGT1A10 chr2 233767034 + Exonic hg38 BLCA TCGA-2F-A9KW-01A 26 48 In-Frame Inter-chr q21.23 Tumor suppressor gene q37.1 Seq+ 81225 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDS1-UGT1A3 CDS1 chr4 84609525 + UGT1A3 chr2 233767034 + Exonic hg38 BLCA TCGA-2F-A9KW-01A 26 48 In-Frame Inter-chr q21.23 Tumor suppressor gene q37.1 Seq+ 81226 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDS1-UGT1A4 CDS1 chr4 84609525 + UGT1A4 chr2 233767034 + Exonic hg38 BLCA TCGA-2F-A9KW-01A 26 48 In-Frame Inter-chr q21.23 Tumor suppressor gene q37.1 Seq+ 81227 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDS1-UGT1A5 CDS1 chr4 84609525 + UGT1A5 chr2 233767034 + Exonic hg38 BLCA TCGA-2F-A9KW-01A 26 48 In-Frame Inter-chr q21.23 Tumor suppressor gene q37.1 Seq+ 81228 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDS1-UGT1A7 CDS1 chr4 84609525 + UGT1A7 chr2 233767034 + Exonic hg38 BLCA TCGA-2F-A9KW-01A 26 48 In-Frame Inter-chr q21.23 Tumor suppressor gene q37.1 Seq+ 81229 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDS1-UGT1A8 CDS1 chr4 84609525 + UGT1A8 chr2 233767034 + Exonic hg38 BLCA TCGA-2F-A9KW-01A 26 48 In-Frame Inter-chr q21.23 Tumor suppressor gene q37.1 Seq+ 81230 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDS1-UGT1A9 CDS1 chr4 84609525 + UGT1A9 chr2 233767034 + Exonic hg38 BLCA TCGA-2F-A9KW-01A 26 48 In-Frame Inter-chr q21.23 Tumor suppressor gene q37.1 Seq+ 81231 ChimerSeq TCGA FAWG TCGA_RNA-Seq VGLL4-TMEM40 VGLL4 chr3 11601833 - TMEM40 chr3 12749840 - Exonic hg38 BLCA TCGA-2F-A9KW-01A 7 15 Out-of-frame Intra-chr p25.2 p25.2 Seq+ 81232 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF13B-PPP2R5B KIF13B chr8 29118868 - PPP2R5B chr11 64925471 + Exonic hg38 BLCA TCGA-2F-A9KW-01A 1 9 CDS-5'UTR Inter-chr p12 q13.1 Seq+ 81233 ChimerSeq TCGA FAWG TCGA_RNA-Seq IPPK-CDC42SE1 IPPK chr9 92634386 - CDC42SE1 chr1 151059773 - Exonic hg38 BLCA TCGA-2F-A9KW-01A 2 4 CDS-5'UTR Inter-chr q22.31 q21.3 81234 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN11-ZNF706 PTPN11 chr12 112419125 + ZNF706 chr8 101201743 - Exonic hg38 BLCA TCGA-2F-A9KW-01A 1 4 CDS-5'UTR Inter-chr q24.13 Oncogene Tumor suppressor gene q22.3 Transcription factor 81235 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP62-VSTM2B NUP62 chr19 49927694 - VSTM2B chr19 29563846 + Exonic hg38 BLCA TCGA-4Z-AA7M-01A 95 385 5'UTR-CDS Intra-chr q13.33 q12 Seq+ 81236 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL4I1-VSTM2B IL4I1 chr19 49927694 - VSTM2B chr19 29563846 + Exonic hg38 BLCA TCGA-4Z-AA7M-01A 95 375 5'UTR-CDS Intra-chr q13.33 q12 Seq+ 81237 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A11-ADSS SLC39A11 chr17 73084808 - ADSS chr1 244437768 - Exonic hg38 BLCA TCGA-4Z-AA7M-01A 8 42 In-Frame Inter-chr q25.1 q44 Seq+ 81238 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM37-ZNF385D TRIM37 chr17 59062567 - ZNF385D chr3 22169035 - Exonic hg38 BLCA TCGA-4Z-AA7M-01A 8 12 CDS-5'UTR Inter-chr q22 p24.3 Transcription factor Seq+ 81239 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP31-PRKCB USP31 chr16 23148638 - PRKCB chr16 23988508 + Exonic hg38 BLCA TCGA-4Z-AA7M-01A 4 12 Out-of-frame Intra-chr p12.2 p12.2 Tumor suppressor gene Seq+ 81240 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGS-SPAG5 PIGS chr17 28556166 - SPAG5 chr17 28578292 - Exonic hg38 BLCA TCGA-4Z-AA7M-01A 3 11 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 81241 ChimerSeq TCGA FAWG TCGA_RNA-Seq ILF3-MAPK13 ILF3 chr19 10654487 + MAPK13 chr6 36131271 + Exonic hg38 BLCA TCGA-4Z-AA7M-01A 1 13 5'UTR-5'UTR Inter-chr p13.2 p21.31 81242 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUDT19-DPY19L3 NUDT19 chr19 32709392 + DPY19L3 chr19 32432716 + Exonic hg38 BLCA TCGA-4Z-AA7M-01A 1 12 Out-of-frame Intra-chr q13.11 q13.11 81243 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF507-TDRD12 ZNF507 chr19 32345783 + TDRD12 chr19 32797735 + Exonic hg38 BLCA TCGA-4Z-AA7M-01A 1 8 5'UTR-CDS Intra-chr q13.11 Transcription factor q13.11 81244 ChimerSeq TCGA FAWG TCGA_RNA-Seq MELK-CNTFR MELK chr9 36573007 + CNTFR chr9 34581205 - Exonic hg38 BLCA TCGA-4Z-AA7M-01A 1 4 5'UTR-5'UTR Intra-chr p13.2 CAMK:CAMKL p13.3 Seq+ 81245 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-SHANK2 PPFIA1 chr11 70272436 + SHANK2 chr11 70698763 - Exonic hg38 BLCA TCGA-4Z-AA7O-01A 4 3 Out-of-frame Intra-chr q13.3 q13.4 Seq+ 81246 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM4B-FCHSD2 RBM4B chr11 66676668 - FCHSD2 chr11 73015885 - Exonic hg38 BLCA TCGA-4Z-AA7O-01A 1 6 Out-of-frame Intra-chr q13.2 q13.4 Seq+ 81247 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXJ3-SVBP FOXJ3 chr1 42227883 - SVBP chr1 42807500 - Exonic hg38 BLCA TCGA-4Z-AA7Q-01A 32 137 In-Frame Intra-chr p34.2 Transcription factor p34.2 81248 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLF1-RSRC1 MLF1 chr3 158592581 + RSRC1 chr3 158543335 + Exonic hg38 BLCA TCGA-4Z-AA7Q-01A 5 11 In-Frame Intra-chr q25.32 q25.32 Seq+ 81249 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMD8-ADK SAMD8 chr10 75111722 + ADK chr10 74708321 + Exonic hg38 BLCA TCGA-4Z-AA7Q-01A 4 15 5'UTR-5'UTR Intra-chr q22.2 q22.2 Seq+ 81250 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACOX3-CD96 ACOX3 chr4 8374978 - CD96 chr3 111665527 + Exonic hg38 BLCA TCGA-4Z-AA7Q-01A 1 5 CDS-5'UTR Inter-chr p16.1 q13.13 81251 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHMP4C-ITGB1 CHMP4C chr8 81732816 + ITGB1 chr10 32901635 - Exonic hg38 BLCA TCGA-4Z-AA7Q-01A 2 0 Out-of-frame Inter-chr q21.13 p11.22 Tumor suppressor gene Seq+ 81252 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPAR6-TPP2 LPAR6 chr13 48412421 - TPP2 chr13 102604793 + Exonic hg38 BLCA TCGA-4Z-AA7Q-01A 1 2 Out-of-frame Intra-chr q14.2 q33.1 81253 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2G1-PELP1 UBE2G1 chr17 4282798 - PELP1 chr17 4691442 - Exonic hg38 BLCA TCGA-4Z-AA7Q-01A 1 2 3'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 81254 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCA1-RAB5C ABCA1 chr9 104883039 - RAB5C chr17 42126848 - Exonic hg38 BLCA TCGA-4Z-AA7Q-01A 1 1 Out-of-frame Inter-chr q31.1 q21.2 81255 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAM10-TERB2 ADAM10 chr15 58717577 - TERB2 chr15 44973867 + Exonic hg38 BLCA TCGA-4Z-AA7R-01A 13 46 In-Frame Intra-chr q21.3 q21.1 81256 ChimerSeq TCGA FAWG TCGA_RNA-Seq SWT1-DCAF8 SWT1 chr1 185190642 + DCAF8 chr1 160225663 - Exonic hg38 BLCA TCGA-4Z-AA7R-01A 8 34 In-Frame Intra-chr q25.3 q23.2 Seq+ 81257 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCDC2-MRS2 DCDC2 chr6 24353569 - MRS2 chr6 24422937 + Exonic hg38 BLCA TCGA-4Z-AA7R-01A 3 10 In-Frame Intra-chr p22.3 Tumor suppressor gene p22.3 81258 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCM3-ADGRF1 MCM3 chr6 52282045 - ADGRF1 chr6 47024217 - Exonic hg38 BLCA TCGA-4Z-AA7R-01A 4 3 Out-of-frame Intra-chr p12.2 p12.3 81259 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKAL1-OFCC1 CDKAL1 chr6 20548705 + OFCC1 chr6 9850469 - Exonic hg38 BLCA TCGA-4Z-AA7R-01A 3 6 Out-of-frame Intra-chr p22.3 p24.3 Seq+ 81260 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC9A8-TOM1L2 SLC9A8 chr20 49815189 + TOM1L2 chr17 17850952 - Exonic hg38 BLCA TCGA-4Z-AA7R-01A 1 4 Out-of-frame Inter-chr q13.13 p11.2 Tumor suppressor gene Seq+ 81261 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3IP-CD63 RAB3IP chr12 69739031 + CD63 chr12 55726261 - Exonic hg38 BLCA TCGA-4Z-AA7S-01A 425 1388 5'UTR-CDS Intra-chr q15 q13.2 Seq+ 81262 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD63-OS9 CD63 chr12 55725813 - OS9 chr12 57715760 + Exonic hg38 BLCA TCGA-4Z-AA7S-01A 205 908 In-Frame Intra-chr q13.2 q13.3 Seq+ 81263 ChimerSeq TCGA FAWG TCGA_RNA-Seq PABPC1-VPS13B PABPC1 chr8 100704297 - VPS13B chr8 99766774 + Exonic hg38 BLCA TCGA-4Z-AA7S-01A 138 334 3'UTR-CDS Intra-chr q22.3 q22.2 Seq+ 81264 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGAP3-MYOCD PGAP3 chr17 39684597 - MYOCD chr17 12736161 + Exonic hg38 BLCA TCGA-4Z-AA7S-01A 20 181 Out-of-frame Intra-chr q12 Oncogene p12 Seq+ 81265 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF12-EXOSC2 DCAF12 chr9 34088000 - EXOSC2 chr9 130699329 + Exonic hg38 BLCA TCGA-4Z-AA7S-01A 11 43 3'UTR-CDS Intra-chr p13.3 q34.12 Seq+ 81266 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3IP-OS9 RAB3IP chr12 69739031 + OS9 chr12 57715760 + Exonic hg38 BLCA TCGA-4Z-AA7S-01A 10 38 5'UTR-CDS Intra-chr q15 q13.3 Seq+ 81267 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLFN11-MIEN1 SLFN11 chr17 35373474 - MIEN1 chr17 39729423 - Exonic hg38 BLCA TCGA-4Z-AA7S-01A 8 18 5'UTR-3'UTR Intra-chr q12 q12 Seq+ 81268 ChimerSeq TCGA FAWG TCGA_RNA-Seq KB-RGS22 KB chr8 101492450 - RGS22 chr8 99965430 - Exonic hg38 BLCA TCGA-4Z-AA7S-01A 4 6 Out-of-frame Intra-chr q22.2 81269 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD3-SMCR5 STARD3 chr17 39637231 + SMCR5 chr17 17777459 - Exonic hg38 BLCA TCGA-4Z-AA7S-01A 5 1 5'UTR-3'UTR Intra-chr q12 p11.2 81270 ChimerSeq TCGA FAWG TCGA_RNA-Seq AZIN1-NCALD AZIN1 chr8 102863807 - NCALD chr8 102020289 - Exonic hg38 BLCA TCGA-4Z-AA7S-01A 2 4 5'UTR-5'UTR Intra-chr q22.3 q22.3 81271 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGAP3-LRRC6 PGAP3 chr17 39684597 - LRRC6 chr8 132610261 - Exonic hg38 BLCA TCGA-4Z-AA7S-01A 2 4 In-Frame Inter-chr q12 Oncogene q24.22 Seq+ 81272 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-CTTN ERBB2 chr17 39715939 + CTTN chr11 70422940 + Exonic hg38 BLCA TCGA-4Z-AA7S-01A 1 6 In-Frame Inter-chr q12 Oncogene q13.3 Seq+ 81273 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRLF3-AATF CRLF3 chr17 30784307 - AATF chr17 36950214 + Exonic hg38 BLCA TCGA-4Z-AA7S-01A 1 5 3'UTR-3'UTR Intra-chr q11.2 81274 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCN8A-KCNC2 SCN8A chr12 51689096 + KCNC2 chr12 75051317 - Exonic hg38 BLCA TCGA-4Z-AA7W-01A 1 5 Out-of-frame Intra-chr q13.13 q21.1 Seq+ 81275 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC14L4-SIAH1 SEC14L4 chr22 30503677 - SIAH1 chr16 48403667 - Exonic hg38 BLCA TCGA-4Z-AA80-01A 9 44 CDS-5'UTR Inter-chr q12.2 q12.1 Tumor suppressor gene Seq+ 81276 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF13A-KDM1B KIF13A chr6 17987054 - KDM1B chr6 18166267 + Exonic hg38 BLCA TCGA-4Z-AA80-01A 7 26 In-Frame Intra-chr p22.3 p22.3 Seq+ 81277 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-DYNC2H1 PPFIA1 chr11 70272436 + DYNC2H1 chr11 103113537 + Exonic hg38 BLCA TCGA-4Z-AA80-01A 6 22 In-Frame Intra-chr q13.3 q22.3 Seq+ 81278 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPM7-EHD4 TRPM7 chr15 50596255 - EHD4 chr15 41901181 - Exonic hg38 BLCA TCGA-4Z-AA80-01A 1 21 Out-of-frame Intra-chr q21.2 q15.1 81279 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELF1-VWA8 ELF1 chr13 40981983 - VWA8 chr13 41891587 - Exonic hg38 BLCA TCGA-4Z-AA80-01A 2 9 In-Frame Intra-chr q14.11 Transcription factor q14.11 81280 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRCH1-PHF11 LRCH1 chr13 46728984 + PHF11 chr13 49513059 + Exonic hg38 BLCA TCGA-4Z-AA80-01A 2 4 In-Frame Intra-chr q14.13 q14.2 Seq+ 81281 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD9-NBAT1 BTBD9 chr6 38192519 - NBAT1 chr6 22136669 - Exonic hg38 BLCA TCGA-4Z-AA80-01A 1 5 CDS-3'UTR Intra-chr p21.2 p22.3 81282 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD11-SLC4A4 PSMD11 chr17 32454619 + SLC4A4 chr4 71339370 + Exonic hg38 BLCA TCGA-4Z-AA80-01A 1 4 Out-of-frame Inter-chr q11.2 q13.3 81283 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREBBP-NLRC3 CREBBP chr16 3744894 - NLRC3 chr16 3542274 - Exonic hg38 BLCA TCGA-4Z-AA82-01A 5 14 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 81284 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANBP17-TLX3 RANBP17 chr5 170862051 + TLX3 chr5 171310150 + Exonic hg38 BLCA TCGA-4Z-AA82-01A 4 3 Out-of-frame Intra-chr q35.1 q35.1 Transcription factor Seq+ 81285 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKLE2-ZNF605 ANKLE2 chr12 132741419 - ZNF605 chr12 132948270 - Exonic hg38 BLCA TCGA-4Z-AA82-01A 1 6 CDS-5'UTR Intra-chr q24.33 q24.33 Transcription factor 81286 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOB1B-RUFY3 MOB1B chr4 70902550 + RUFY3 chr4 70806516 + Exonic hg38 BLCA TCGA-4Z-AA82-01A 1 5 Out-of-frame Intra-chr q13.3 Tumor suppressor gene q13.3 81287 ChimerSeq TCGA FAWG TCGA_RNA-Seq EP300-HAUS8 EP300 chr22 41117821 + HAUS8 chr19 17056002 - Exonic hg38 BLCA TCGA-4Z-AA84-01A 8 44 In-Frame Inter-chr q13.2 Oncogene p13.11 Seq+ 81288 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAF1-ITGB3BP FAF1 chr1 50801631 - ITGB3BP chr1 63508570 - Exonic hg38 BLCA TCGA-4Z-AA84-01A 6 37 In-Frame Intra-chr p32.3 p31.3 Seq+ 81289 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP170-UBE2Q1 CEP170 chr1 243255040 - UBE2Q1 chr1 154555964 - Exonic hg38 BLCA TCGA-4Z-AA84-01A 6 19 5'UTR-CDS Intra-chr q21.3 Seq+ 81290 ChimerSeq TCGA FAWG TCGA_RNA-Seq IQCK-BCAR4 IQCK chr16 19733828 + BCAR4 chr16 11820465 - Exonic hg38 BLCA TCGA-4Z-AA84-01A 6 16 Out-of-frame Intra-chr p12.3 p13.13 Seq+ 81291 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK1-FABP2 ROCK1 chr18 21110818 - FABP2 chr4 119320842 - Exonic hg38 BLCA TCGA-4Z-AA84-01A 7 10 Out-of-frame Inter-chr q11.1 AGC:DMPK q26 Seq+ 81292 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZW10-UPK2 ZW10 chr11 113768833 - UPK2 chr11 118957598 + Exonic hg38 BLCA TCGA-4Z-AA84-01A 6 9 Out-of-frame Intra-chr q23.2 q23.3 Seq+ 81293 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP1-AMBRA1 ARHGAP1 chr11 46695660 - AMBRA1 chr11 46418052 - Exonic hg38 BLCA TCGA-4Z-AA84-01A 5 8 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 81294 ChimerSeq TCGA FAWG TCGA_RNA-Seq MVP-SEZ6L2 MVP chr16 29820510 + SEZ6L2 chr16 29888725 - Exonic hg38 BLCA TCGA-4Z-AA84-01A 6 4 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 81295 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRP68-XIRP2 SRP68 chr17 76057403 - XIRP2 chr2 167210735 + Exonic hg38 BLCA TCGA-4Z-AA84-01A 2 17 Out-of-frame Inter-chr q25.1 q24.3 Seq+ 81296 ChimerSeq TCGA FAWG TCGA_RNA-Seq PFKP-CAMK2G PFKP chr10 3116846 + CAMK2G chr10 73860889 - Exonic hg38 BLCA TCGA-4Z-AA84-01A 4 6 Out-of-frame Intra-chr p15.2 q22.2 Seq+ 81297 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM91A1-ANXA13 FAM91A1 chr8 123775298 + ANXA13 chr8 123712753 - Exonic hg38 BLCA TCGA-4Z-AA84-01A 1 12 In-Frame Intra-chr q24.13 q24.13 Seq+ 81298 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF700-TOX ZNF700 chr19 11925273 + TOX chr8 58939544 - Exonic hg38 BLCA TCGA-4Z-AA84-01A 2 7 In-Frame Inter-chr p13.2 Transcription factor q12.1 Seq+ 81299 ChimerSeq TCGA FAWG TCGA_RNA-Seq GANC-RORA GANC chr15 42326424 + RORA chr15 60497619 - Exonic hg38 BLCA TCGA-4Z-AA84-01A 2 5 Out-of-frame Intra-chr q15.1 q22.2 Transcription factor Seq+ 81300 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP4B1-PIFO AP4B1 chr1 113901755 - PIFO chr1 111346910 + Exonic hg38 BLCA TCGA-4Z-AA84-01A 1 6 In-Frame Intra-chr p13.2 p13.2 81301 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNNA1-LARP1 CTNNA1 chr5 138753510 + LARP1 chr5 154811247 + Exonic hg38 BLCA TCGA-4Z-AA84-01A 1 6 5'UTR-CDS Intra-chr q31.2 Oncogene q33.2 Seq+ 81302 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLCCI1-ICA1 GLCCI1 chr7 8071131 + ICA1 chr7 8143972 - Exonic hg38 BLCA TCGA-4Z-AA84-01A 1 6 Out-of-frame Intra-chr p21.3 p21.3 81303 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANBP3-ANKRD24 RANBP3 chr19 5978061 - ANKRD24 chr19 4199875 + Exonic hg38 BLCA TCGA-4Z-AA86-01A 5 8 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 81304 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCA-NF1 PRKCA chr17 66306127 + NF1 chr17 31325820 + Exonic hg38 BLCA TCGA-4Z-AA86-01A 2 7 Out-of-frame Intra-chr q24.2 q11.2 Oncogene Tumor suppressor gene Seq+ 81305 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRG1-GINS3 ADGRG1 chr16 57619881 + GINS3 chr16 58386621 + Exonic hg38 BLCA TCGA-4Z-AA87-01A 18 73 5'UTR-5'UTR Intra-chr q21 q21 81306 ChimerSeq TCGA FAWG TCGA_RNA-Seq LUC7L-SLC27A5 LUC7L chr16 220649 - SLC27A5 chr19 58501410 - Exonic hg38 BLCA TCGA-4Z-AA87-01A 7 28 Out-of-frame Inter-chr p13.3 q13.43 Seq+ 81307 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3GAP2-BPNT1 RAB3GAP2 chr1 220205907 - BPNT1 chr1 220079854 - Exonic hg38 BLCA TCGA-4Z-AA87-01A 6 15 CDS-5'UTR Intra-chr q41 q41 Seq+ 81308 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELOC-STAU2 ELOC chr8 73959765 - STAU2 chr8 73617451 - Exonic hg38 BLCA TCGA-4Z-AA87-01A 1 32 Out-of-frame Intra-chr q21.11 q21.11 81309 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEGF9-PSMD5 MEGF9 chr9 120713758 - PSMD5 chr9 120820979 - Exonic hg38 BLCA TCGA-4Z-AA87-01A 5 9 Out-of-frame Intra-chr q33.2 q33.2 Seq+ 81310 ChimerSeq TCGA FAWG TCGA_RNA-Seq C21orf59-BACE2 C21orf59 chr21 32603161 - BACE2 chr21 41226266 + Exonic hg38 BLCA TCGA-4Z-AA87-01A 2 17 Out-of-frame Intra-chr q22.11 q22.2 81311 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNB1-CDK11A GNB1 chr1 1890820 - CDK11A chr1 1705025 - Exonic hg38 BLCA TCGA-4Z-AA87-01A 5 5 5'UTR-CDS Intra-chr p36.33 p36.33 Seq+ 81312 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSI2-YPEL2 MSI2 chr17 57262192 + YPEL2 chr17 59353215 + Exonic hg38 BLCA TCGA-4Z-AA87-01A 3 5 CDS-5'UTR Intra-chr q22 q22 Seq+ 81313 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAN1C1-TMEM57 MAN1C1 chr1 25753578 + TMEM57 chr1 25498264 + Exonic hg38 BLCA TCGA-4Z-AA87-01A 1 3 Out-of-frame Intra-chr p36.11 p36.11 81314 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTP4A2-ARFGEF2 PTP4A2 chr1 31937987 - ARFGEF2 chr20 49028530 + Exonic hg38 BLCA TCGA-5N-A9KI-01A 1 13 5'UTR-CDS Inter-chr p35.2 q13.13 Seq+ 81315 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1E-FOXB1 MYO1E chr15 59372498 - FOXB1 chr15 60025756 + Exonic hg38 BLCA TCGA-5N-A9KM-01A 16 18 CDS-3'UTR Intra-chr q22.2 q22.2 Transcription factor Seq+ 81316 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPP8-PARP16 DPP8 chr15 65474209 - PARP16 chr15 65248228 - Exonic hg38 BLCA TCGA-5N-A9KM-01A 4 13 3'UTR-3'UTR Intra-chr q22.31 q22.31 Seq+ 81317 ChimerSeq TCGA FAWG TCGA_RNA-Seq VGLL4-LIMD1 VGLL4 chr3 11702971 - LIMD1 chr3 45665650 + Exonic hg38 BLCA TCGA-BL-A0C8-01A 163 426 In-Frame Intra-chr p25.2 p21.31 Tumor suppressor gene Seq+ 81318 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIER2-CDK5RAP1 MIER2 chr19 325635 - CDK5RAP1 chr20 33387533 - Exonic hg38 BLCA TCGA-BL-A0C8-01A 51 65 In-Frame Inter-chr p13.3 q11.21 Seq+ 81319 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPC3-PPARG GPC3 chrX 133953050 - PPARG chr3 12379704 + Exonic hg38 BLCA TCGA-BL-A0C8-01A 17 100 In-Frame Inter-chr q26.2 Tumor suppressor gene p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 81320 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD151-EPS8L2 CD151 chr11 836843 + EPS8L2 chr11 710422 + Exonic hg38 BLCA TCGA-BL-A0C8-01A 17 66 Out-of-frame Intra-chr p15.5 p15.5 Seq+ 81321 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIP2B-SPATS2 DIP2B chr12 50714596 + SPATS2 chr12 49525944 + Exonic hg38 BLCA TCGA-BL-A0C8-01A 18 41 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 81322 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCP4L1-NDUFS2 PCP4L1 chr1 161258983 + NDUFS2 chr1 161213380 + Exonic hg38 BLCA TCGA-BL-A0C8-01A 9 61 In-Frame Intra-chr q23.3 q23.3 Seq+ 81323 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX30-PXT1 SNX30 chr9 112838697 + PXT1 chr6 36426091 - Exonic hg38 BLCA TCGA-BL-A0C8-01A 7 24 CDS-5'UTR Inter-chr q32 p21.31 Seq+ 81324 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS23-TRIM37 MRPS23 chr17 57849240 - TRIM37 chr17 58999459 - Exonic hg38 BLCA TCGA-BL-A0C8-01A 6 19 Out-of-frame Intra-chr q22 q22 Seq+ 81325 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAG9-PCMT1 SPAG9 chr17 51047375 - PCMT1 chr6 149771162 + Exonic hg38 BLCA TCGA-BL-A0C8-01A 1 24 Out-of-frame Inter-chr q21.33 q25.1 Seq+ 81326 ChimerSeq TCGA FAWG TCGA_RNA-Seq TWF2-FSTL4 TWF2 chr3 52238992 - FSTL4 chr5 133233537 - Exonic hg38 BLCA TCGA-BL-A0C8-01A 3 15 Out-of-frame Inter-chr p21.2 q31.1 Seq+ 81327 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCBLD1-ZNF550 DCBLD1 chr6 117549308 + ZNF550 chr19 57535270 - Exonic hg38 BLCA TCGA-BL-A0C8-01A 5 1 Out-of-frame Inter-chr q22.1 q13.43 Transcription factor 81328 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRHL2-FAM49A GRHL2 chr8 101649499 + FAM49A chr2 16588129 - Exonic hg38 BLCA TCGA-BL-A0C8-01A 2 13 CDS-5'UTR Inter-chr q22.3 Transcription factor p24.2 Seq+ 81329 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF462-TBCA ZNF462 chr9 106939107 + TBCA chr5 77708347 - Exonic hg38 BLCA TCGA-BL-A0C8-01A 2 6 Out-of-frame Inter-chr q31.2 Transcription factor q14.1 Seq+ 81330 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDXK-ABCG1 PDXK chr21 43719381 + ABCG1 chr21 42225671 + Exonic hg38 BLCA TCGA-BL-A0C8-01A 1 4 In-Frame Intra-chr q22.3 q22.3 81331 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOGA1-RPS6KA5 SOGA1 chr20 36802856 - RPS6KA5 chr14 90978524 - Exonic hg38 BLCA TCGA-BL-A0C8-01A 1 2 Out-of-frame Inter-chr q11.23 q32.11 81332 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNK2-CENPP WNK2 chr9 93185610 + CENPP chr9 92611314 + Exonic hg38 BLCA TCGA-BL-A0C8-01A 1 2 In-Frame Intra-chr q22.31 Tumor suppressor gene q22.31 Seq+ 81333 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP26-VDAC1 ARHGAP26 chr5 143014116 + VDAC1 chr5 133973848 - Exonic hg38 BLCA TCGA-BL-A0C8-01A 1 1 Out-of-frame Intra-chr q31.3 q31.1 81334 ChimerSeq TCGA FAWG TCGA_RNA-Seq F11R-DOCK6 F11R chr1 161000238 - DOCK6 chr19 11235995 - Exonic hg38 BLCA TCGA-BL-A0C8-01A 1000 1000 Out-of-frame Inter-chr q23.3 p13.2 81335 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACKR2-POMGNT2 ACKR2 chr3 42809532 + POMGNT2 chr3 43081536 - Exonic hg38 BLCA TCGA-BL-A13J-01A 5 35 5'UTR-5'UTR Intra-chr p22.1 p22.1 81336 ChimerSeq TCGA FAWG TCGA_RNA-Seq KRBOX1-POMGNT2 KRBOX1 chr3 42809532 + POMGNT2 chr3 43081536 - Exonic hg38 BLCA TCGA-BL-A13J-01A 5 28 5'UTR-5'UTR Intra-chr p22.1 p22.1 81337 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND4C-ACER2 DENND4C chr9 19230833 + ACER2 chr9 19446281 + Exonic hg38 BLCA TCGA-BL-A13J-01A 10 0 5'UTR-CDS Intra-chr p22.1 p22.1 Seq+ 81338 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGST3-UCK2 MGST3 chr1 165631293 + UCK2 chr1 165890204 + Exonic hg38 BLCA TCGA-BL-A13J-01A 1 9 5'UTR-CDS Intra-chr q24.1 q24.1 Seq+ 81339 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBL3-CKAP2 UBL3 chr13 29849512 - CKAP2 chr13 52456523 + Exonic hg38 BLCA TCGA-BL-A3JM-01A 51 103 Out-of-frame Intra-chr q12.3 q14.3 Seq+ 81340 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCC1-DOCK3 SMARCC1 chr3 47772817 - DOCK3 chr3 50890026 + Exonic hg38 BLCA TCGA-BL-A3JM-01A 7 12 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.2 Seq+ 81341 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3IP-NUP107 RAB3IP chr12 69756663 + NUP107 chr12 68731607 + Exonic hg38 BLCA TCGA-BT-A0S7-01A 91 536 Out-of-frame Intra-chr q15 q15 Seq+ 81342 ChimerSeq TCGA FAWG TCGA_RNA-Seq EP300-MCHR1 EP300 chr22 41093098 + MCHR1 chr22 40680949 + Exonic hg38 BLCA TCGA-BT-A0S7-01A 14 81 In-Frame Intra-chr q13.2 Oncogene q13.2 Seq+ 81343 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMOTL1-SLCO2B1 AMOTL1 chr11 94795160 + SLCO2B1 chr11 75162655 + Exonic hg38 BLCA TCGA-BT-A0S7-01A 2 12 In-Frame Intra-chr q21 q13.4 Seq+ 81344 ChimerSeq TCGA FAWG TCGA_RNA-Seq C5orf66-JUP C5orf66 chr5 135174172 + JUP chr17 41758870 - Exonic hg38 BLCA TCGA-BT-A0YX-01A 53 205 5'UTR-CDS Inter-chr q31.1 q21.2 Tumor suppressor gene 81345 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCBD2-C5orf66 PCBD2 chr5 134905223 + C5orf66 chr5 135174042 + Exonic hg38 BLCA TCGA-BT-A0YX-01A 13 36 CDS-5'UTR Intra-chr q31.1 q31.1 81346 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACAP2-XXYLT1 ACAP2 chr3 195333028 - XXYLT1 chr3 195156581 - Exonic hg38 BLCA TCGA-BT-A0YX-01A 1 5 Out-of-frame Intra-chr q29 q29 Seq+ 81347 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACAP2-XXYLT1 ACAP2 chr3 195342471 - XXYLT1 chr3 195226856 - Exonic hg38 BLCA TCGA-BT-A20J-01A 5 9 In-Frame Intra-chr q29 q29 Seq+ 81348 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D4-TRAPPC12 TBC1D4 chr13 75309942 - TRAPPC12 chr2 3443779 + Exonic hg38 BLCA TCGA-BT-A20J-01A 3 17 CDS-3'UTR Inter-chr q22.2 Seq+ 81349 ChimerSeq TCGA FAWG TCGA_RNA-Seq C3-EXO5 C3 chr19 6677906 - EXO5 chr1 40514515 + Exonic hg38 BLCA TCGA-BT-A20J-01A 3 11 CDS-5'UTR Inter-chr p13.3 p34.2 Seq+ 81350 ChimerSeq TCGA FAWG TCGA_RNA-Seq KBTBD2-COBL KBTBD2 chr7 32891536 - COBL chr7 51219944 - Exonic hg38 BLCA TCGA-BT-A20J-01A 5 2 5'UTR-CDS Intra-chr p14.3 p12.1 Seq+ 81351 ChimerSeq TCGA FAWG TCGA_RNA-Seq COBL-FKBP9 COBL chr7 51190850 - FKBP9 chr7 33002676 + Exonic hg38 BLCA TCGA-BT-A20J-01A 1 5 In-Frame Intra-chr p12.1 p14.3 81352 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNNB1-SEM1 CTNNB1 chr3 41239354 + SEM1 chr7 96645932 - Exonic hg38 BLCA TCGA-BT-A20N-01A 5 58 3'UTR-3'UTR Inter-chr p22.1 Oncogene q21.3 81353 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6R3-YAP1 PPP6R3 chr11 68558679 + YAP1 chr11 102227469 + Exonic hg38 BLCA TCGA-BT-A20N-01A 6 45 In-Frame Intra-chr q13.2 q22.1 Tumor suppressor gene Seq+ 81354 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF652-MRPL1 ZNF652 chr17 49311312 - MRPL1 chr4 77906946 + Exonic hg38 BLCA TCGA-BT-A20N-01A 2 15 3'UTR-CDS Inter-chr q21.33 Transcription factor q21.1 81355 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL4-BTN3A3 FBXL4 chr6 98926477 - BTN3A3 chr6 26443957 + Exonic hg38 BLCA TCGA-BT-A20N-01A 4 6 Out-of-frame Intra-chr q16.2 p22.2 Seq+ 81356 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPEB4-HMP19 CPEB4 chr5 173890858 + HMP19 chr5 174242682 + Exonic hg38 BLCA TCGA-BT-A20P-01A 1 18 Out-of-frame Intra-chr q35.2 q35.2 81357 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPN2-KCNJ18 EPN2 chr17 19237531 + KCNJ18 chr17 21695983 + Exonic hg38 BLCA TCGA-BT-A20Q-01A 7 58 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 81358 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM6A-ANOS1 KDM6A chrX 45085979 + ANOS1 chrX 8623670 - Exonic hg38 BLCA TCGA-BT-A20Q-01A 3 6 Out-of-frame Intra-chr p11.3 Oncogene Tumor suppressor gene p22.31 81359 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPN2-KCNJ12 EPN2 chr17 19237531 + KCNJ12 chr17 21408519 + Exonic hg38 BLCA TCGA-BT-A20Q-01A 1000 1000 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 81360 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNA12-CARD11 GNA12 chr7 2794928 - CARD11 chr7 2934629 - Exonic hg38 BLCA TCGA-BT-A20R-01A 10 17 In-Frame Intra-chr p22.2 p22.2 Oncogene Seq+ 81361 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEDD4L-HYI NEDD4L chr18 58252054 + HYI chr1 43452319 - Exonic hg38 BLCA TCGA-BT-A20R-01A 2 10 Out-of-frame Inter-chr q21.31 Tumor suppressor gene p34.2 Seq+ 81362 ChimerSeq TCGA FAWG TCGA_RNA-Seq GUCY1A3-SIK3 GUCY1A3 chr4 155667419 + SIK3 chr11 116957064 - Exonic hg38 BLCA TCGA-BT-A20R-01A 2 1 Out-of-frame Inter-chr q32.1 q23.3 Seq+ 81363 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATAD2B-ERI3 GATAD2B chr1 153922733 - ERI3 chr1 44319744 - Exonic hg38 BLCA TCGA-BT-A20T-01A 2 6 5'UTR-5'UTR Intra-chr Transcription factor p34.1 Seq+ 81364 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD1-FAT2 NSD1 chr5 177248324 + FAT2 chr5 151512606 - Exonic hg38 BLCA TCGA-BT-A20T-01A 1 2 In-Frame Intra-chr q35.3 Oncogene q33.1 Seq+ 81365 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP6V0A1-STAT5A ATP6V0A1 chr17 42458963 + STAT5A chr17 42288056 + Exonic hg38 BLCA TCGA-BT-A20U-01A 13 38 5'UTR-5'UTR Intra-chr q21.2 q21.2 Tumor suppressor gene Transcription factor Seq+ 81366 ChimerSeq TCGA FAWG TCGA_RNA-Seq VAC14-WWOX VAC14 chr16 70731495 - WWOX chr16 79211608 + Exonic hg38 BLCA TCGA-BT-A20V-01A 14 44 Out-of-frame Intra-chr q22.2 q23.1 Tumor suppressor gene Seq+ 81367 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE4B-ZNF536 UBE4B chr1 10105744 + ZNF536 chr19 30710757 + Exonic hg38 BLCA TCGA-BT-A20V-01A 6 17 CDS-3'UTR Inter-chr p36.22 Tumor suppressor gene q12 Transcription factor 81368 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4C-IFNA22P KDM4C chr9 6990524 + IFNA22P chr9 21278427 - Exonic hg38 BLCA TCGA-BT-A20V-01A 6 12 CDS-3'UTR Intra-chr p24.1 p21.3 Seq+ 81369 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAP-CCT5 DAP chr5 10748175 - CCT5 chr5 10258111 + Exonic hg38 BLCA TCGA-BT-A20W-01A 19 76 In-Frame Intra-chr p15.2 p15.2 Seq+ 81370 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADIPOR2-DCP1B ADIPOR2 chr12 1691213 + DCP1B chr12 1967910 - Exonic hg38 BLCA TCGA-BT-A20W-01A 10 70 3'UTR-5'UTR Intra-chr p13.33 p13.33 Seq+ 81371 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPM7-SRP14 TRPM7 chr15 50686531 - SRP14 chr15 40038948 - Exonic hg38 BLCA TCGA-BT-A20W-01A 7 79 In-Frame Intra-chr q21.2 q15.1 Seq+ 81372 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCC1-SHISA5 SMARCC1 chr3 47706409 - SHISA5 chr3 48469843 - Exonic hg38 BLCA TCGA-BT-A20W-01A 12 51 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 81373 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDI2-FBXO15 DDI2 chr1 15664111 + FBXO15 chr18 74073557 - Exonic hg38 BLCA TCGA-BT-A20W-01A 7 26 Out-of-frame Inter-chr p36.21 q22.3 81374 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP4B1-FAAHP1 CYP4B1 chr1 46815264 + FAAHP1 chr1 46482210 + Exonic hg38 BLCA TCGA-BT-A20W-01A 1 11 CDS-3'UTR Intra-chr p33 p33 81375 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACROD1-NRXN2 MACROD1 chr11 64151239 - NRXN2 chr11 64608082 - Exonic hg38 BLCA TCGA-BT-A20W-01A 3 3 In-Frame Intra-chr q13.1 q13.1 Seq+ 81376 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1A-HNRNPK ARID1A chr1 26732792 + HNRNPK chr9 83969440 - Exonic hg38 BLCA TCGA-BT-A20W-01A 1 8 Out-of-frame Inter-chr p36.11 Oncogene Tumor suppressor gene q21.32 81377 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD46-ODF1 ANKRD46 chr8 100522606 - ODF1 chr8 102560452 + Exonic hg38 BLCA TCGA-BT-A20W-01A 1 7 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 81378 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM169A-ANKRD31 FAM169A chr5 74834426 - ANKRD31 chr5 75068664 - Exonic hg38 BLCA TCGA-BT-A20W-01A 1 3 In-Frame Intra-chr q13.3 q13.3 Seq+ 81379 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM178B-NDUFB2 TMEM178B chr7 141074692 + NDUFB2 chr7 140702866 + Exonic hg38 BLCA TCGA-BT-A20W-01A 1 2 Out-of-frame Intra-chr q34 q34 81380 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARCH9-KCNC2 2019_ 3_ 9_ chr12 57757084 + KCNC2 chr12 75051317 - Exonic hg38 BLCA TCGA-BT-A20X-01A 1 8 Out-of-frame Intra-chr q14.1 q21.1 Seq+ 81381 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK24-TMTC4 STK24 chr13 98576745 - TMTC4 chr13 100606427 - Exonic hg38 BLCA TCGA-BT-A2LA-01A 11 33 In-Frame Intra-chr q32.2 q32.3 Seq+ 81382 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM13C-ZNF365 FAM13C chr10 59251575 - ZNF365 chr10 62623103 + Exonic hg38 BLCA TCGA-BT-A2LA-01A 3 8 Out-of-frame Intra-chr q21.1 q21.2 Transcription factor Seq+ 81383 ChimerSeq TCGA FAWG TCGA_RNA-Seq FECH-NCMAP FECH chr18 57580073 - NCMAP chr1 24595424 + Exonic hg38 BLCA TCGA-BT-A2LA-01A 2 5 CDS-5'UTR Inter-chr q21.31 p36.11 Seq+ 81384 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2A-SLC22A10 KMT2A chr11 118474315 + SLC22A10 chr11 63362380 + Exonic hg38 BLCA TCGA-BT-A2LA-01A 1 7 CDS-3'UTR Intra-chr q23.3 Oncogene Transcription factor q12.3 81385 ChimerSeq TCGA FAWG TCGA_RNA-Seq HELZ-ABCA10 HELZ chr17 67243784 - ABCA10 chr17 69227285 - Exonic hg38 BLCA TCGA-BT-A2LA-01A 1 6 5'UTR-5'UTR Intra-chr q24.2 q24.3 Seq+ 81386 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDOA-RPL7A ALDOA chr16 30069389 + RPL7A chr9 133350001 + Exonic hg38 BLCA TCGA-BT-A2LA-01A 1 1 CDS-3'UTR Inter-chr p11.2 81387 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0430-IQCK KIAA0430 chr16 15630332 - IQCK chr16 19856487 + Exonic hg38 BLCA TCGA-BT-A2LB-01A 44 177 Out-of-frame Intra-chr p12.3 Seq+ 81388 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM39-PRDM5 RBM39 chr20 35741941 - PRDM5 chr4 120821345 - Exonic hg38 BLCA TCGA-BT-A2LD-01A 4 5 5'UTR-CDS Inter-chr q11.22 q27 Tumor suppressor gene Transcription factor Seq+ 81389 ChimerSeq TCGA FAWG TCGA_RNA-Seq COX6C-TDRD12 COX6C chr8 99891908 - TDRD12 chr19 32790531 + Exonic hg38 BLCA TCGA-BT-A2LD-01A 2 8 Out-of-frame Inter-chr q22.2 q13.11 Seq+ 81390 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIST1H2AC-HP1BP3 HIST1H2AC chr6 26124633 + HP1BP3 chr1 20773610 - Exonic hg38 BLCA TCGA-BT-A2LD-01A 2 1 3'UTR-CDS Inter-chr p22.2 p36.12 81391 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTDSS1-NIPAL2 PTDSS1 chr8 96287146 + NIPAL2 chr8 98254087 - Exonic hg38 BLCA TCGA-BT-A2LD-01A 2 1 In-Frame Intra-chr q22.1 q22.2 Seq+ 81392 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNA12-URI1 GNA12 chr7 2794928 - URI1 chr19 30015536 + Exonic hg38 BLCA TCGA-BT-A2LD-01A 1 1 In-Frame Inter-chr p22.2 q12 81393 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR62-HCST WDR62 chr19 36084744 + HCST chr19 35903351 + Exonic hg38 BLCA TCGA-BT-A3PH-01A 20 131 In-Frame Intra-chr q13.12 q13.12 Seq+ 81394 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2L3-YPEL1 UBE2L3 chr22 21567771 + YPEL1 chr22 21710908 - Exonic hg38 BLCA TCGA-BT-A3PH-01A 1 3 5'UTR-5'UTR Intra-chr q11.21 q11.22 Seq+ 81395 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALT4-H19 B4GALT4 chr3 119211732 - H19 chr11 1997807 - Exonic hg38 BLCA TCGA-BT-A3PH-01A 1000 1000 Out-of-frame Inter-chr q13.32 p15.5 Tumor suppressor gene 81396 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXT1-FAM155A EXT1 chr8 118110085 - FAM155A chr13 107170786 - Exonic hg38 BLCA TCGA-BT-A3PK-01A 2 14 Out-of-frame Inter-chr q24.11 Oncogene Tumor suppressor gene q33.3 Seq+ 81397 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED16-MEX3D MED16 chr19 881559 - MEX3D chr19 1556923 - Exonic hg38 BLCA TCGA-BT-A3PK-01A 2 11 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 81398 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK1-GUCA2B ROCK1 chr18 21023620 - GUCA2B chr1 42154680 + Exonic hg38 BLCA TCGA-BT-A3PK-01A 4 3 In-Frame Inter-chr q11.1 AGC:DMPK p34.2 Seq+ 81399 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIVEP3-ZMYND12 HIVEP3 chr1 41918413 - ZMYND12 chr1 42436543 - Exonic hg38 BLCA TCGA-BT-A3PK-01A 1 6 5'UTR-CDS Intra-chr p34.2 Tumor suppressor gene Transcription factor p34.2 Seq+ 81400 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCMH1-CAP1 SCMH1 chr1 41242059 - CAP1 chr1 40059337 + Exonic hg38 BLCA TCGA-BT-A3PK-01A 1 2 5'UTR-5'UTR Intra-chr p34.2 Transcription factor p34.2 81401 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2CB-MYOC PPP2CB chr8 30812320 - MYOC chr1 171638722 - Exonic hg38 BLCA TCGA-BT-A3PK-01A 1 1 Out-of-frame Inter-chr p12 Tumor suppressor gene q24.3 81402 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP1-KCNMB4 SRGAP1 chr12 63844883 + KCNMB4 chr12 70400209 + Exonic hg38 BLCA TCGA-BT-A42C-01A 49 457 Out-of-frame Intra-chr q14.2 q15 Seq+ 81403 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDM1-FRS2 MDM1 chr12 68302620 - FRS2 chr12 69486202 + Exonic hg38 BLCA TCGA-BT-A42C-01A 2 15 CDS-5'UTR Intra-chr q15 q15 81404 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCHSD2-PPFIA1 FCHSD2 chr11 73140031 - PPFIA1 chr11 70348189 + Exonic hg38 BLCA TCGA-BT-A42C-01A 1 13 In-Frame Intra-chr q13.4 q13.3 Seq+ 81405 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP107-TMBIM4 NUP107 chr12 68719654 + TMBIM4 chr12 66138769 - Exonic hg38 BLCA TCGA-BT-A42C-01A 3 4 Out-of-frame Intra-chr q15 q14.3 Seq+ 81406 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRR-TPH2 PTPRR chr12 70698265 - TPH2 chr12 72140120 + Exonic hg38 BLCA TCGA-BT-A42C-01A 1 9 3'UTR-3'UTR Intra-chr q15 q21.1 81407 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFG3L2-LYZ AFG3L2 chr18 12363782 - LYZ chr12 69350108 + Exonic hg38 BLCA TCGA-BT-A42C-01A 1 5 Out-of-frame Inter-chr p11.21 q15 81408 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNHG16-MFSD11 SNHG16 chr17 76559043 + MFSD11 chr17 76769746 + Exonic hg38 BLCA TCGA-BT-A42C-01A 1 5 5'UTR-5'UTR Intra-chr q25.1 q25.1 81409 ChimerSeq TCGA FAWG TCGA_RNA-Seq POT1-RTKN2 POT1 chr7 124928815 - RTKN2 chr10 62199861 - Exonic hg38 BLCA TCGA-BT-A42E-01A 1 3 5'UTR-CDS Inter-chr q31.33 Oncogene q21.2 Seq+ 81410 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEAK1-CIB2 PEAK1 chr15 77286423 - CIB2 chr15 78123739 - Exonic hg38 BLCA TCGA-BT-A42F-01A 1 17 5'UTR-CDS Intra-chr q24.3 q25.1 81411 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNB5-BNIP2 GNB5 chr15 52147459 - BNIP2 chr15 59664120 - Exonic hg38 BLCA TCGA-BT-A42F-01A 2 11 In-Frame Intra-chr q21.2 q22.2 Seq+ 81412 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIAT-SEZ6L MIAT chr22 26646959 + SEZ6L chr22 26340436 + Exonic hg38 BLCA TCGA-C4-A0EZ-01A 5 11 5'UTR-CDS Intra-chr q12.1 q12.1 81413 ChimerSeq TCGA FAWG TCGA_RNA-Seq CALCB-INSC CALCB chr11 15077470 + INSC chr11 15175741 + Exonic hg38 BLCA TCGA-C4-A0EZ-01A 1000 1000 3'UTR-CDS Intra-chr p15.2 p15.2 81414 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNC2H1-C11orf70 DYNC2H1 chr11 103129005 + C11orf70 chr11 102047815 + Exonic hg38 BLCA TCGA-C4-A0F0-01A 7 82 Out-of-frame Intra-chr q22.3 q22.1 Seq+ 81415 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTK2-EIF3E PTK2 chr8 141001125 - EIF3E chr8 108309463 - Exonic hg38 BLCA TCGA-C4-A0F0-01A 1 4 5'UTR-5'UTR Intra-chr q24.3 q23.1 81416 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAP30-GALNT7 SAP30 chr4 173374037 + GALNT7 chr4 173247980 + Exonic hg38 BLCA TCGA-C4-A0F0-01A 1000 1000 In-Frame Intra-chr q34.1 q34.1 81417 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D8B-RNF128 TBC1D8B chrX 106802983 + RNF128 chrX 106795580 + Exonic hg38 BLCA TCGA-C4-A0F6-01A 5 13 In-Frame Intra-chr q22.3 q22.3 Seq+ 81418 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCT2-BEST3 CCT2 chr12 69589687 + BEST3 chr12 69678893 - Exonic hg38 BLCA TCGA-C4-A0F6-01A 1 2 In-Frame Intra-chr q15 q15 81419 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL11B-MIPOL1 BCL11B chr14 99257471 - MIPOL1 chr14 37219553 + Exonic hg38 BLCA TCGA-C4-A0F7-01A 34 131 CDS-5'UTR Intra-chr q32.2 Oncogene Transcription factor q13.3 Seq+ 81420 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF343-CSNK2A1 ZNF343 chr20 2492699 - CSNK2A1 chr20 473950 - Exonic hg38 BLCA TCGA-C4-A0F7-01A 25 82 CDS-3'UTR Intra-chr p13 Transcription factor p13 Oncogene 81421 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFX7-LIPC RFX7 chr15 56179270 - LIPC chr15 58538333 + Exonic hg38 BLCA TCGA-C4-A0F7-01A 13 66 Out-of-frame Intra-chr q21.3 Transcription factor q21.3 Seq+ 81422 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN14-NSL1 PTPN14 chr1 214451805 - NSL1 chr1 212739601 - Exonic hg38 BLCA TCGA-C4-A0F7-01A 12 69 In-Frame Intra-chr q41 q32.3 Seq+ 81423 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRK3-AP1B1 GRK3 chr22 25690283 + AP1B1 chr22 29351825 - Exonic hg38 BLCA TCGA-C4-A0F7-01A 11 38 In-Frame Intra-chr q12.1 q12.2 81424 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP1B1-GRK3 AP1B1 chr22 29354650 - GRK3 chr22 25695107 + Exonic hg38 BLCA TCGA-C4-A0F7-01A 6 26 In-Frame Intra-chr q12.2 q12.1 81425 ChimerSeq TCGA FAWG TCGA_RNA-Seq ICA1-HGF ICA1 chr7 8262440 - HGF chr7 81745120 - Exonic hg38 BLCA TCGA-C4-A0F7-01A 2 8 5'UTR-CDS Intra-chr p21.3 q21.11 Oncogene Seq+ 81426 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP128-TSHR CEP128 chr14 80761437 - TSHR chr14 81096639 + Exonic hg38 BLCA TCGA-C4-A0F7-01A 2 7 Out-of-frame Intra-chr q31.1 q31.1 Oncogene Seq+ 81427 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGS1-NAT9 PGS1 chr17 78419725 + NAT9 chr17 74773685 - Exonic hg38 BLCA TCGA-C4-A0F7-01A 1 2 5'UTR-5'UTR Intra-chr q25.3 q25.1 81428 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSMO1-CPE MSMO1 chr4 165327764 + CPE chr4 165464390 + Exonic hg38 BLCA TCGA-CF-A1HR-01A 8 10 5'UTR-CDS Intra-chr q32.3 q32.3 Seq+ 81429 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP85-ZDHHC18 NUP85 chr17 75233158 + ZDHHC18 chr1 26853726 + Exonic hg38 BLCA TCGA-CF-A1HR-01A 2 7 Out-of-frame Inter-chr q25.1 p36.11 Seq+ 81430 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATPAF1-OSBPL9 ATPAF1 chr1 46643194 - OSBPL9 chr1 51776833 + Exonic hg38 BLCA TCGA-CF-A1HS-01A 15 91 In-Frame Intra-chr p33 p32.3 Seq+ 81431 ChimerSeq TCGA FAWG TCGA_RNA-Seq AASDHPPT-CARD16 AASDHPPT chr11 106079692 + CARD16 chr11 105044658 - Exonic hg38 BLCA TCGA-CF-A1HS-01A 3 22 In-Frame Intra-chr q22.3 q22.3 Seq+ 81432 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHROOM2-REPS2 SHROOM2 chrX 9912587 + REPS2 chrX 17103718 + Exonic hg38 BLCA TCGA-CF-A1HS-01A 6 9 5'UTR-CDS Intra-chr p22.2 p22.2 Seq+ 81433 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD6-RTN4 FRMD6 chr14 51570410 + RTN4 chr2 54987698 - Exonic hg38 BLCA TCGA-CF-A1HS-01A 3 9 5'UTR-CDS Inter-chr q22.1 p16.1 Tumor suppressor gene Seq+ 81434 ChimerSeq TCGA FAWG TCGA_RNA-Seq RICTOR-HCN1 RICTOR chr5 39074111 - HCN1 chr5 45645608 - Exonic hg38 BLCA TCGA-CF-A1HS-01A 2 9 Out-of-frame Intra-chr p13.1 p12 Seq+ 81435 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTN4-AS2 RTN4 chr2 55010087 - AS2 chr14 51584283 - Exonic hg38 BLCA TCGA-CF-A1HS-01A 2 7 Out-of-frame Inter-chr p16.1 Tumor suppressor gene 81436 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFAND3-DNAH8 ZFAND3 chr6 37820016 + DNAH8 chr6 38722776 + Exonic hg38 BLCA TCGA-CF-A1HS-01A 2 7 CDS-5'UTR Intra-chr p21.2 p21.2 Seq+ 81437 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLE-ANKS1B POLE chr12 132687254 - ANKS1B chr12 98832136 - Exonic hg38 BLCA TCGA-CF-A27C-01A 5 12 Out-of-frame Intra-chr q24.33 q23.1 Seq+ 81438 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1807198 + TACC3 chr4 1739644 + Exonic hg38 BLCA TCGA-CF-A3MF-01A 273 898 Out-of-frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 81439 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806934 + TACC3 chr4 1739702 + Exonic hg38 BLCA TCGA-CF-A3MG-01A 935 1742 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 81440 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-LRTOMT SHANK2 chr11 70798443 - LRTOMT chr11 72093496 + Exonic hg38 BLCA TCGA-CF-A3MG-01A 5 22 In-Frame Intra-chr q13.4 q13.4 Seq+ 81441 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806934 + TACC3 chr4 1739702 + Exonic hg38 BLCA TCGA-CF-A3MH-01A 1677 3524 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 81442 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA7-SERGEF PLEKHA7 chr11 17013989 - SERGEF chr11 17788413 - Exonic hg38 BLCA TCGA-CF-A3MH-01A 10 33 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 81443 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806934 + TACC3 chr4 1739702 + Exonic hg38 BLCA TCGA-CF-A47S-01A 2589 8282 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 81444 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF4-ZFYVE28 RNF4 chr4 2596329 + ZFYVE28 chr4 2320271 - Exonic hg38 BLCA TCGA-CF-A47V-01A 8 124 3'UTR-CDS Intra-chr p16.3 p16.3 81445 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC9-PLAT TRAPPC9 chr8 140360050 - PLAT chr8 42176151 - Exonic hg38 BLCA TCGA-CF-A47X-01A 2 6 Out-of-frame Intra-chr q24.3 p11.21 Seq+ 81446 ChimerSeq TCGA FAWG TCGA_RNA-Seq MORC3-PCP4 MORC3 chr21 36320303 + PCP4 chr21 39898476 + Exonic hg38 BLCA TCGA-CF-A47X-01A 1 8 In-Frame Intra-chr q22.12 q22.2 81447 ChimerSeq TCGA FAWG TCGA_RNA-Seq CIPC-LRRC74A CIPC chr14 77098361 + LRRC74A chr14 76865968 + Exonic hg38 BLCA TCGA-CF-A7I0-01A 5 19 5'UTR-CDS Intra-chr q24.3 q24.3 81448 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCYL2-UTP20 SCYL2 chr12 100298175 + UTP20 chr12 101356926 + Exonic hg38 BLCA TCGA-CF-A7I0-01A 3 2 Out-of-frame Intra-chr q23.1 Other:SCY1 q23.2 Seq+ 81449 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL42-POLR3B MRPL42 chr12 93487660 + POLR3B chr12 106509420 + Exonic hg38 BLCA TCGA-CF-A7I0-01A 1000 1000 In-Frame Intra-chr q22 q23.3 Seq+ 81450 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO1-CWF19L2 ANO1 chr11 70132079 + CWF19L2 chr11 107443049 - Exonic hg38 BLCA TCGA-CF-A8HX-01A 5 18 Out-of-frame Intra-chr q13.3 q22.3 Seq+ 81451 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806934 + TACC3 chr4 1735731 + Exonic hg38 BLCA TCGA-CF-A8HY-01A 316 827 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 81452 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCAPD3-KBTBD3 NCAPD3 chr11 134192689 - KBTBD3 chr11 106059109 - Exonic hg38 BLCA TCGA-CF-A8HY-01A 2 5 CDS-5'UTR Intra-chr q25 q22.3 Seq+ 81453 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASSF7-EPS8L2 RASSF7 chr11 561033 + EPS8L2 chr11 722091 + Exonic hg38 BLCA TCGA-CF-A8HY-01A 1 8 3'UTR-CDS Intra-chr p15.5 p15.5 81454 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM1-LAPTM5 PUM1 chr1 31028796 - LAPTM5 chr1 30742549 - Exonic hg38 BLCA TCGA-CU-A0YN-01A 26 208 In-Frame Intra-chr p35.2 p35.2 Seq+ 81455 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMBR1L-KCNK6 LMBR1L chr12 49110484 - KCNK6 chr19 38326593 + Exonic hg38 BLCA TCGA-CU-A0YN-01A 18 75 Out-of-frame Inter-chr q13.12 q13.2 Seq+ 81456 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF606-RDH13 ZNF606 chr19 57980162 - RDH13 chr19 55067715 - Exonic hg38 BLCA TCGA-CU-A0YN-01A 6 62 Out-of-frame Intra-chr q13.43 Transcription factor Seq+ 81457 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB10-STEAP1B GRB10 chr7 50755887 - STEAP1B chr7 22494886 - Exonic hg38 BLCA TCGA-CU-A0YN-01A 1 16 5'UTR-5'UTR Intra-chr p12.1 p15.3 Seq+ 81458 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC2A13-FAM120A SLC2A13 chr12 40028301 - FAM120A chr9 93561109 + Exonic hg38 BLCA TCGA-CU-A0YN-01A 4 2 In-Frame Inter-chr q12 q22.31 Seq+ 81459 ChimerSeq TCGA FAWG TCGA_RNA-Seq COBL-SEPT14 COBL chr7 51083058 - SEPT14 chr7 55807258 - Exonic hg38 BLCA TCGA-CU-A0YN-01A 1 4 Out-of-frame Intra-chr p12.1 p11.2 Seq+ 81460 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF7IP-PLBD1 ATF7IP chr12 14365827 + PLBD1 chr12 14511711 - Exonic hg38 BLCA TCGA-CU-A0YN-01A 1 1 5'UTR-CDS Intra-chr p13.1 p13.1 81461 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC2A13-ZNF329 SLC2A13 chr12 40028301 - ZNF329 chr19 58142661 - Exonic hg38 BLCA TCGA-CU-A0YN-01A 1000 1000 CDS-5'UTR Inter-chr q12 q13.43 Transcription factor Seq+ 81462 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM27-SLC35E2B RBM27 chr5 146219103 + SLC35E2B chr1 1666019 - Exonic hg38 BLCA TCGA-CU-A0YO-01A 8 28 Out-of-frame Inter-chr q32 p36.33 Seq+ 81463 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB4A-SNRPB RAB4A chr1 229271370 + SNRPB chr20 2467758 - Exonic hg38 BLCA TCGA-CU-A0YO-01A 7 18 Out-of-frame Inter-chr q42.13 p13 Seq+ 81464 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM17-PSAP RBM17 chr10 6089193 + PSAP chr10 71834505 - Exonic hg38 BLCA TCGA-CU-A0YO-01A 7 2 5'UTR-CDS Intra-chr p15.1 q22.1 Seq+ 81465 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNRPB-RAB4A SNRPB chr20 2470688 - RAB4A chr1 229286486 + Exonic hg38 BLCA TCGA-CU-A0YO-01A 2 15 Out-of-frame Inter-chr p13 q42.13 Seq+ 81466 ChimerSeq TCGA FAWG TCGA_RNA-Seq LUZP1-NEDD4L LUZP1 chr1 23091190 - NEDD4L chr18 58252001 + Exonic hg38 BLCA TCGA-CU-A0YO-01A 1 6 In-Frame Inter-chr p36.12 q21.31 Tumor suppressor gene Seq+ 81467 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM189-OFCC1 TMEM189 chr20 50129546 - OFCC1 chr6 9775889 - Exonic hg38 BLCA TCGA-CU-A0YR-01A 2 22 Out-of-frame Inter-chr q13.13 p24.3 81468 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB7-PLXDC1 GRB7 chr17 39744207 + PLXDC1 chr17 39067959 - Exonic hg38 BLCA TCGA-CU-A0YR-01A 3 10 In-Frame Intra-chr q12 q12 Seq+ 81469 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF280D-STK3 ZNF280D chr15 56733458 - STK3 chr8 98707311 - Exonic hg38 BLCA TCGA-CU-A0YR-01A 2 2 5'UTR-CDS Inter-chr q21.3 Transcription factor q22.2 Seq+ 81470 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL9-MPTX1 BCL9 chr1 147600337 + MPTX1 chr1 159276507 + Exonic hg38 BLCA TCGA-CU-A3KJ-01A 14 58 Out-of-frame Intra-chr q21.2 Oncogene q23.2 81471 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPHS2-MAPK3 SEPHS2 chr16 30445222 - MAPK3 chr16 30114377 - Exonic hg38 BLCA TCGA-CU-A3KJ-01A 6 8 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 81472 ChimerSeq TCGA FAWG TCGA_RNA-Seq HELZ-CEP112 HELZ chr17 67120405 - CEP112 chr17 65689218 - Exonic hg38 BLCA TCGA-CU-A3KJ-01A 1 15 Out-of-frame Intra-chr q24.2 q24.1 Seq+ 81473 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-CTTN ERBB2 chr17 39715939 + CTTN chr11 70422940 + Exonic hg38 BLCA TCGA-CU-A3KJ-01A 1 1 In-Frame Inter-chr q12 Oncogene q13.3 Seq+ 81474 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPIDR-UBE2V2 SPIDR chr8 47294030 + UBE2V2 chr8 48043033 + Exonic hg38 BLCA TCGA-CU-A3QU-01A 2 25 Out-of-frame Intra-chr q11.21 q11.21 81475 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF267-AGBL4 ZNF267 chr16 31873969 + AGBL4 chr1 48867230 - Exonic hg38 BLCA TCGA-CU-A3QU-01A 3 10 In-Frame Inter-chr p11.2 Transcription factor p33 Seq+ 81476 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFRC-FBLN1 TFRC chr3 196082043 - FBLN1 chr22 45518682 + Exonic hg38 BLCA TCGA-CU-A3QU-01A 1 2 5'UTR-CDS Inter-chr q29 q13.31 Tumor suppressor gene 81477 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAA35-LAMC3 NAA35 chr9 86013897 + LAMC3 chr9 131075831 + Exonic hg38 BLCA TCGA-CU-A3YL-01A 3 12 In-Frame Intra-chr q21.33 q34.12 Seq+ 81478 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENAH-UCHL5 ENAH chr1 225652686 - UCHL5 chr1 193051817 - Exonic hg38 BLCA TCGA-CU-A5W6-01A 5 12 Out-of-frame Intra-chr q42.12 q31.2 Seq+ 81479 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIMCH1-CWH43 LIMCH1 chr4 41524478 + CWH43 chr4 49028629 + Exonic hg38 BLCA TCGA-CU-A5W6-01A 3 14 In-Frame Intra-chr p13 p11 Seq+ 81480 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAK-LUC7L3 GAK chr4 932043 - LUC7L3 chr17 50736960 + Exonic hg38 BLCA TCGA-CU-A5W6-01A 1 16 Out-of-frame Inter-chr p16.3 Other:NAK q21.33 Seq+ 81481 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNBP4-SVIL FNBP4 chr11 47765270 - SVIL chr10 29569312 - Exonic hg38 BLCA TCGA-CU-A5W6-01A 1 4 5'UTR-5'UTR Inter-chr p11.2 p11.23 81482 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCA4-CARM1 SMARCA4 chr19 11027950 + CARM1 chr19 10904951 + Exonic hg38 BLCA TCGA-CU-A5W6-01A 1 3 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 81483 ChimerSeq TCGA FAWG TCGA_RNA-Seq IP6K1-RHOA IP6K1 chr3 49747818 - RHOA chr3 49375591 - Exonic hg38 BLCA TCGA-CU-A72E-01A 51 161 CDS-5'UTR Intra-chr p21.31 p21.31 Oncogene Tumor suppressor gene Seq+ 81484 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS14-MB21D2 RPS14 chr5 150446802 - MB21D2 chr3 192799650 - Exonic hg38 BLCA TCGA-CU-A72E-01A 5 9 Out-of-frame Inter-chr q33.1 q29 Seq+ 81485 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-PPP1R1B ERBB2 chr17 39710481 + PPP1R1B chr17 39633883 + Exonic hg38 BLCA TCGA-DK-A1A3-01A 11 25 In-Frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 81486 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEBPG-TDRD12 CEBPG chr19 33373895 + TDRD12 chr19 32748476 + Exonic hg38 BLCA TCGA-DK-A1A3-01A 8 16 5'UTR-CDS Intra-chr q13.11 Transcription factor q13.11 Seq+ 81487 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD8-MAP2K5 PSMD8 chr19 38382228 + MAP2K5 chr15 67806646 + Exonic hg38 BLCA TCGA-DK-A1A3-01A 1 13 In-Frame Inter-chr q13.2 q23 STE:STE7 81488 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERRFI1-LUZP1 ERRFI1 chr1 8026158 - LUZP1 chr1 23109127 - Exonic hg38 BLCA TCGA-DK-A1A3-01A 2 6 5'UTR-5'UTR Intra-chr p36.23 Tumor suppressor gene p36.12 Seq+ 81489 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL2L13-ZNF383 BCL2L13 chr22 17702386 + ZNF383 chr19 37242469 + Exonic hg38 BLCA TCGA-DK-A1A3-01A 1 5 In-Frame Inter-chr q11.21 q13.12 Transcription factor Seq+ 81490 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS15-CC2D1B EPS15 chr1 51519199 - CC2D1B chr1 52346203 - Exonic hg38 BLCA TCGA-DK-A1A3-01A 1 4 CDS-3'UTR Intra-chr p32.3 p32.3 81491 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-CTTN ERBB2 chr17 39715939 + CTTN chr11 70422940 + Exonic hg38 BLCA TCGA-DK-A1A5-01A 7 20 In-Frame Inter-chr q12 Oncogene q13.3 Seq+ 81492 ChimerSeq TCGA FAWG TCGA_RNA-Seq COIL-CA4 COIL chr17 56960775 - CA4 chr17 60155314 + Exonic hg38 BLCA TCGA-DK-A1A5-01A 4 12 Out-of-frame Intra-chr q22 q23.1 Seq+ 81493 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL16-VPS53 METTL16 chr17 2511759 - VPS53 chr17 560573 - Exonic hg38 BLCA TCGA-DK-A1A6-01A 11 38 5'UTR-5'UTR Intra-chr p13.3 Tumor suppressor gene Seq+ 81494 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPT1A-NANOGNBP1 CPT1A chr11 68812437 - NANOGNBP1 chr2 100660215 + Exonic hg38 BLCA TCGA-DK-A1A6-01A 4 12 Out-of-frame Inter-chr q13.3 q11.2 81495 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK3-MRPL48 STK3 chr8 98825515 - MRPL48 chr11 73805027 + Exonic hg38 BLCA TCGA-DK-A1A6-01A 4 12 Out-of-frame Inter-chr q22.2 q13.4 Seq+ 81496 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNRNP40-ADGRB2 SNRNP40 chr1 31267871 - ADGRB2 chr1 31744731 - Exonic hg38 BLCA TCGA-DK-A1A6-01A 4 8 Out-of-frame Intra-chr p35.2 p35.2 81497 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSPP1-PPP1R42 CSPP1 chr8 67064496 + PPP1R42 chr8 66971140 - Exonic hg38 BLCA TCGA-DK-A1A6-01A 1 16 Out-of-frame Intra-chr q13.1 q13.1 81498 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13B-MYO9B VPS13B chr8 99193057 + MYO9B chr19 17211647 + Exonic hg38 BLCA TCGA-DK-A1A6-01A 2 9 Out-of-frame Inter-chr q22.2 p13.11 Seq+ 81499 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF248-FAM107B ZNF248 chr10 37831232 - FAM107B chr10 14553387 - Exonic hg38 BLCA TCGA-DK-A1A6-01A 2 8 3'UTR-5'UTR Intra-chr p11.21 Transcription factor p13 81500 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL48-PRSS23 MRPL48 chr11 73808350 + PRSS23 chr11 86932695 + Exonic hg38 BLCA TCGA-DK-A1A6-01A 1 8 5'UTR-5'UTR Intra-chr q13.4 q14.2 81501 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-MATN2 SHANK2 chr11 71056481 - MATN2 chr8 98021205 + Exonic hg38 BLCA TCGA-DK-A1A6-01A 1 3 Out-of-frame Inter-chr q13.4 q22.1 81502 ChimerSeq TCGA FAWG TCGA_RNA-Seq ISYNA1-PABPC1 ISYNA1 chr19 18438093 - PABPC1 chr8 100709223 - Exonic hg38 BLCA TCGA-DK-A1A6-01A 1 2 5'UTR-CDS Inter-chr p13.11 q22.3 81503 ChimerSeq TCGA FAWG TCGA_RNA-Seq FABP3-ADGRB2 FABP3 chr1 31372942 - ADGRB2 chr1 31756815 - Exonic hg38 BLCA TCGA-DK-A1A6-01A 1 1 Out-of-frame Intra-chr p35.2 Tumor suppressor gene p35.2 81504 ChimerSeq TCGA FAWG TCGA_RNA-Seq NECTIN4-PFDN2 NECTIN4 chr1 161089218 - PFDN2 chr1 161102375 - Exonic hg38 BLCA TCGA-DK-A1A7-01A 6 45 Out-of-frame Intra-chr q23.3 q23.3 81505 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHTN1-PRDX3 SHTN1 chr10 117005022 - PRDX3 chr10 119174592 - Exonic hg38 BLCA TCGA-DK-A1A7-01A 3 5 In-Frame Intra-chr q25.3 q26.11 81506 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF27-UBQLN1 KIF27 chr9 83850099 - UBQLN1 chr9 83669327 - Exonic hg38 BLCA TCGA-DK-A1A7-01A 2 4 In-Frame Intra-chr q21.32 q21.32 Seq+ 81507 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK1-RB1CC1 TAOK1 chr17 29482288 + RB1CC1 chr8 52642812 - Exonic hg38 BLCA TCGA-DK-A1AC-01A 41 97 Out-of-frame Inter-chr q11.2 q11.23 Tumor suppressor gene Seq+ 81508 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCMTD1-RHOT1 PCMTD1 chr8 51860845 - RHOT1 chr17 32182757 + Exonic hg38 BLCA TCGA-DK-A1AC-01A 28 81 Out-of-frame Inter-chr q11.23 q11.2 Seq+ 81509 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT5B-MYO1D KMT5B chr11 68180132 - MYO1D chr17 32638835 - Exonic hg38 BLCA TCGA-DK-A1AC-01A 11 42 Out-of-frame Inter-chr q13.2 q11.2 81510 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC4A4-TMPRSS11E SLC4A4 chr4 71236649 + TMPRSS11E chr4 68461821 + Exonic hg38 BLCA TCGA-DK-A1AC-01A 4 40 CDS-3'UTR Intra-chr q13.3 Seq+ 81511 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM201-SPSB1 TMEM201 chr1 9602272 + SPSB1 chr1 9355743 + Exonic hg38 BLCA TCGA-DK-A1AC-01A 1 9 CDS-5'UTR Intra-chr p36.22 p36.22 Seq+ 81512 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPCN2-MYO1D TPCN2 chr11 69088366 + MYO1D chr17 32605241 - Exonic hg38 BLCA TCGA-DK-A1AC-01A 1 3 3'UTR-CDS Inter-chr q13.3 q11.2 81513 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2F2-S100A4 GTF2F2 chr13 45120721 + S100A4 chr1 153544809 - Exonic hg38 BLCA TCGA-DK-A1AD-01A 104 396 CDS-5'UTR Inter-chr q14.12 q21.3 Seq+ 81514 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEA1-CRADD EEA1 chr12 92891629 - CRADD chr12 93849970 + Exonic hg38 BLCA TCGA-DK-A1AD-01A 17 58 Out-of-frame Intra-chr q22 Transcription factor q22 Seq+ 81515 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2F2-S100A3 GTF2F2 chr13 45120721 + S100A3 chr1 153548490 - Exonic hg38 BLCA TCGA-DK-A1AD-01A 10 77 CDS-5'UTR Inter-chr q14.12 q21.3 Seq+ 81516 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTK2-UGT2A3 PTK2 chr8 141001125 - UGT2A3 chr4 68932759 - Exonic hg38 BLCA TCGA-DK-A1AD-01A 10 28 5'UTR-5'UTR Inter-chr q24.3 Seq+ 81517 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPARG-CDKAL1 PPARG chr3 12417154 + CDKAL1 chr6 20649293 + Exonic hg38 BLCA TCGA-DK-A1AD-01A 2 12 In-Frame Inter-chr p25.2 Oncogene Tumor suppressor gene Transcription factor p22.3 Seq+ 81518 ChimerSeq TCGA FAWG TCGA_RNA-Seq STT3B-ZNF860 STT3B chr3 31533312 + ZNF860 chr3 31988660 + Exonic hg38 BLCA TCGA-DK-A1AD-01A 2 5 CDS-5'UTR Intra-chr p23 p23 Transcription factor Seq+ 81519 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCGB2B2-ERCC1 SCGB2B2 chr19 34675630 - ERCC1 chr19 45423381 - Exonic hg38 BLCA TCGA-DK-A1AD-01A 1 4 5'UTR-5'UTR Intra-chr q13.11 q13.32 Oncogene 81520 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP37-TNS1 USP37 chr2 218558498 - TNS1 chr2 217836211 - Exonic hg38 BLCA TCGA-DK-A1AE-01A 1 5 Out-of-frame Intra-chr q35 q35 81521 ChimerSeq TCGA FAWG TCGA_RNA-Seq HPS1-PYROXD2 HPS1 chr10 98446809 - PYROXD2 chr10 98388510 - Exonic hg38 BLCA TCGA-DK-A1AE-01A 1000 1000 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 81522 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2CD3-MYEOV C2CD3 chr11 74048205 - MYEOV chr11 69341510 + Exonic hg38 BLCA TCGA-DK-A1AF-01A 2 16 CDS-3'UTR Intra-chr q13.4 q13.3 81523 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEK4-SETD2 NEK4 chr3 52737586 - SETD2 chr3 47067118 - Exonic hg38 BLCA TCGA-DK-A1AF-01A 3 12 In-Frame Intra-chr p21.1 Other:NEK p21.31 Oncogene Tumor suppressor gene Seq+ 81524 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXW7-ARHGAP10 FBXW7 chr4 152534941 - ARHGAP10 chr4 148071993 + Exonic hg38 BLCA TCGA-DK-A2HX-01A 4 33 5'UTR-CDS Intra-chr q31.3 Oncogene Tumor suppressor gene q31.23 Seq+ 81525 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGUOK-STAMBP DGUOK chr2 73927052 + STAMBP chr2 73859254 + Exonic hg38 BLCA TCGA-DK-A2I1-01A 8 26 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 81526 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMG9-KCNN4 SMG9 chr19 43737597 - KCNN4 chr19 43767089 - Exonic hg38 BLCA TCGA-DK-A2I1-01A 5 26 CDS-3'UTR Intra-chr q13.31 q13.31 Seq+ 81527 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF7IP2-7 ATF7IP2 chr16 10431455 + 7 chr16 33938650 - Exonic hg38 BLCA TCGA-DK-A2I1-01A 3 15 5'UTR-CDS Intra-chr p13.2 81528 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIRAS2-GNA14 DIRAS2 chr9 90642752 - GNA14 chr9 77434522 - Exonic hg38 BLCA TCGA-DK-A2I1-01A 5 5 5'UTR-CDS Intra-chr q22.2 q21.2 Seq+ 81529 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD96-ATP6V0CP2 CD96 chr3 111365918 + ATP6V0CP2 chr3 111478743 + Exonic hg38 BLCA TCGA-DK-A2I1-01A 3 11 Out-of-frame Intra-chr q13.13 q13.13 81530 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF500-MMP25 ZNF500 chr16 4760492 - MMP25 chr16 3055830 + Exonic hg38 BLCA TCGA-DK-A2I1-01A 2 13 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 81531 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFAT5-CCDC113 NFAT5 chr16 69568548 + CCDC113 chr16 58252727 + Exonic hg38 BLCA TCGA-DK-A2I1-01A 3 8 Out-of-frame Intra-chr q22.1 Transcription factor q21 Seq+ 81532 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAG6-PLXDC2 SPAG6 chr10 22368678 + PLXDC2 chr10 20279703 + Exonic hg38 BLCA TCGA-DK-A2I1-01A 1 12 Out-of-frame Intra-chr p12.2 p12.31 Seq+ 81533 ChimerSeq TCGA FAWG TCGA_RNA-Seq IQCK-CASC16 IQCK chr16 19764112 + CASC16 chr16 52591067 - Exonic hg38 BLCA TCGA-DK-A2I1-01A 1 9 CDS-3'UTR Intra-chr p12.3 q12.2 81534 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGD3-SYK FGD3 chr9 92947729 + SYK chr9 90843858 + Exonic hg38 BLCA TCGA-DK-A2I1-01A 1 2 5'UTR-5'UTR Intra-chr q22.31 q22.2 TK:Syk Oncogene Tumor suppressor gene 81535 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL36AL-MAP4K5 RPL36AL chr14 49620562 - MAP4K5 chr14 50456594 - Exonic hg38 BLCA TCGA-DK-A2I2-01A 6 3 5'UTR-CDS Intra-chr q21.3 q22.1 Seq+ 81536 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUFIP2-ZFP69B NUFIP2 chr17 29293783 - ZFP69B chr1 40450656 + Exonic hg38 BLCA TCGA-DK-A2I2-01A 3 6 CDS-5'UTR Inter-chr q11.2 p34.2 Transcription factor 81537 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC12A6-RPL13 SLC12A6 chr15 34336410 - RPL13 chr16 89561578 + Exonic hg38 BLCA TCGA-DK-A2I2-01A 1 1 Out-of-frame Inter-chr q14 q24.3 81538 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCF2L-STK24 MCF2L chr13 112968714 + STK24 chr13 98519473 - Exonic hg38 BLCA TCGA-DK-A2I4-01A 1 6 5'UTR-CDS Intra-chr q34 q32.2 Seq+ 81539 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13B-CDADC1 VPS13B chr8 99391704 + CDADC1 chr13 49291684 + Exonic hg38 BLCA TCGA-DK-A2I6-01A 5 33 In-Frame Inter-chr q22.2 q14.2 Seq+ 81540 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-TATDN1 ERBB2 chr17 39712448 + TATDN1 chr8 124495542 - Exonic hg38 BLCA TCGA-DK-A2I6-01A 10 12 In-Frame Inter-chr q12 Oncogene q24.13 Seq+ 81541 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTSS1-ERBB2 MTSS1 chr8 124727884 - ERBB2 chr17 39706990 + Exonic hg38 BLCA TCGA-DK-A2I6-01A 5 22 Out-of-frame Inter-chr q24.13 Tumor suppressor gene q12 Oncogene Seq+ 81542 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBBP8-TP53 RBBP8 chr18 23016924 + TP53 chr17 7676622 - Exonic hg38 BLCA TCGA-DK-A2I6-01A 5 12 CDS-5'UTR Inter-chr q11.2 Tumor suppressor gene p13.1 Oncogene Tumor suppressor gene Transcription factor Seq+ 81543 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAB39L-CPQ CAB39L chr13 49350744 - CPQ chr8 96834973 + Exonic hg38 BLCA TCGA-DK-A2I6-01A 3 6 Out-of-frame Inter-chr q14.2 q22.1 Seq+ 81544 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV6-PRH2 ETV6 chr12 11752579 + PRH2 chr12 10930269 + Exonic hg38 BLCA TCGA-DK-A2I6-01A 1 9 CDS-3'UTR Intra-chr p13.2 Tumor suppressor gene Transcription factor 81545 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAD5-SIPA1L3 ATAD5 chr17 30858323 + SIPA1L3 chr19 38162253 + Exonic hg38 BLCA TCGA-DK-A2I6-01A 1 4 In-Frame Inter-chr q11.2 q13.13 Seq+ 81546 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMSS1-CRYBG3 CMSS1 chr3 99818043 + CRYBG3 chr3 97843195 + Exonic hg38 BLCA TCGA-DK-A2I6-01A 1 4 Out-of-frame Intra-chr q12.1 q11.2 81547 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYC1-SLC52A2 CYC1 chr8 144096744 + SLC52A2 chr8 144359184 + Exonic hg38 BLCA TCGA-DK-A3IK-01A 16 32 CDS-3'UTR Intra-chr q24.3 q24.3 Seq+ 81548 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPAS2-CNOT11 NPAS2 chr2 100949480 + CNOT11 chr2 101262539 + Exonic hg38 BLCA TCGA-DK-A3IK-01A 9 57 In-Frame Intra-chr q11.2 Tumor suppressor gene Transcription factor q11.2 Seq+ 81549 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG2B-SLC22A17 ATG2B chr14 96316533 - SLC22A17 chr14 23346936 - Exonic hg38 BLCA TCGA-DK-A3IK-01A 4 50 Out-of-frame Intra-chr q32.2 q11.2 Seq+ 81550 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENTPD5-NUBPL ENTPD5 chr14 73970010 - NUBPL chr14 31826629 + Exonic hg38 BLCA TCGA-DK-A3IK-01A 8 19 Out-of-frame Intra-chr q24.3 q12 Seq+ 81551 ChimerSeq TCGA FAWG TCGA_RNA-Seq LTBP1-PLB1 LTBP1 chr2 33188851 + PLB1 chr2 28548860 + Exonic hg38 BLCA TCGA-DK-A3IK-01A 4 16 In-Frame Intra-chr p22.3 p23.2 Seq+ 81552 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K5-PERP MAP3K5 chr6 136791710 - PERP chr6 138096494 - Exonic hg38 BLCA TCGA-DK-A3IK-01A 4 10 In-Frame Intra-chr q23.3 STE:STE11 q23.3 Seq+ 81553 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOM1L2-SREBF1 TOM1L2 chr17 17972262 - SREBF1 chr17 17820521 - Exonic hg38 BLCA TCGA-DK-A3IK-01A 4 10 In-Frame Intra-chr p11.2 Tumor suppressor gene p11.2 Transcription factor Seq+ 81554 ChimerSeq TCGA FAWG TCGA_RNA-Seq VWA8-TPTE2P5 VWA8 chr13 41865736 - TPTE2P5 chr13 40826594 - Exonic hg38 BLCA TCGA-DK-A3IK-01A 3 12 CDS-3'UTR Intra-chr q14.11 q14.11 Seq+ 81555 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOS1AP-LRRC52 NOS1AP chr1 162154476 + LRRC52 chr1 165563505 + Exonic hg38 BLCA TCGA-DK-A3IK-01A 3 10 Out-of-frame Intra-chr q23.3 q24.1 Seq+ 81556 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAP1B-NUP107 RAP1B chr12 68611043 + NUP107 chr12 68734708 + Exonic hg38 BLCA TCGA-DK-A3IK-01A 2 4 5'UTR-CDS Intra-chr q15 q15 Seq+ 81557 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM49B-AK5 FAM49B chr8 129903312 - AK5 chr1 77483317 + Exonic hg38 BLCA TCGA-DK-A3IM-01A 3 22 5'UTR-CDS Inter-chr q24.21 p31.1 Seq+ 81558 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARS-NOP2 MARS chr12 57504299 + NOP2 chr12 6563946 - Exonic hg38 BLCA TCGA-DK-A3IM-01A 3 17 In-Frame Intra-chr q13.3 p13.31 Seq+ 81559 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITCH-NDUFA1 ITCH chr20 34449480 + NDUFA1 chrX 119873304 + Exonic hg38 BLCA TCGA-DK-A3IM-01A 1 8 Out-of-frame Inter-chr q11.22 q24 81560 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIMK2-CDC45 LIMK2 chr22 31268200 + CDC45 chr22 19516527 + Exonic hg38 BLCA TCGA-DK-A3IN-01A 29 67 In-Frame Intra-chr q12.2 TKL:LISK q11.21 Seq+ 81561 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT18-IER3IP1 GALNT18 chr11 11432621 - IER3IP1 chr18 47157537 - Exonic hg38 BLCA TCGA-DK-A3IN-01A 13 36 In-Frame Inter-chr p15.4 q21.1 Seq+ 81562 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAPT1-LDB2 TAPT1 chr4 16226259 - LDB2 chr4 16595875 - Exonic hg38 BLCA TCGA-DK-A3IN-01A 3 10 In-Frame Intra-chr p15.32 p15.32 Seq+ 81563 ChimerSeq TCGA FAWG TCGA_RNA-Seq CABIN1-GRIN2A CABIN1 chr22 24119698 + GRIN2A chr16 9891100 - Exonic hg38 BLCA TCGA-DK-A3IN-01A 2 6 Out-of-frame Inter-chr p13.2 Tumor suppressor gene Seq+ 81564 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZCCHC7-FGF7P3 ZCCHC7 chr9 37120623 + FGF7P3 chr9 39818924 - Exonic hg38 BLCA TCGA-DK-A3IQ-01A 1 15 5'UTR-3'UTR Intra-chr p13.2 p11.2 81565 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL18-HEMK1 KLHL18 chr3 47283094 + HEMK1 chr3 50570931 + Exonic hg38 BLCA TCGA-DK-A3IQ-01A 2 8 CDS-5'UTR Intra-chr p21.31 p21.31 Seq+ 81566 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF213-BAIAP2 RNF213 chr17 80298518 + BAIAP2 chr17 81084832 + Exonic hg38 BLCA TCGA-DK-A3IQ-01A 1 11 Out-of-frame Intra-chr q25.3 Oncogene q25.3 81567 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS8-PIK3C2G EPS8 chr12 15789161 - PIK3C2G chr12 18488449 + Exonic hg38 BLCA TCGA-DK-A3IQ-01A 2 5 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 81568 ChimerSeq TCGA FAWG TCGA_RNA-Seq AIG1-TIAM2 AIG1 chr6 143284225 + TIAM2 chr6 154944116 + Exonic hg38 BLCA TCGA-DK-A3IQ-01A 1 3 5'UTR-5'UTR Intra-chr q24.2 q25.2 81569 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAN2B2-TACC3 MAN2B2 chr4 6578498 + TACC3 chr4 1735731 + Exonic hg38 BLCA TCGA-DK-A3IS-01A 15 51 Out-of-frame Intra-chr p16.1 p16.3 Seq+ 81570 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR78-POLN GPR78 chr4 8558981 + POLN chr4 2131290 - Exonic hg38 BLCA TCGA-DK-A3IS-01A 16 26 5'UTR-CDS Intra-chr p16.1 p16.3 81571 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRDX5-LGR5 PRDX5 chr11 64321068 + LGR5 chr12 71583647 + Exonic hg38 BLCA TCGA-DK-A3IS-01A 4 9 Out-of-frame Inter-chr q13.1 q21.1 Seq+ 81572 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D14-HTRA3 TBC1D14 chr4 6924111 + HTRA3 chr4 8286561 + Exonic hg38 BLCA TCGA-DK-A3IS-01A 1 15 In-Frame Intra-chr p16.1 p16.1 Tumor suppressor gene Seq+ 81573 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFYVE28-TACC3 ZFYVE28 chr4 2418285 - TACC3 chr4 1739702 + Exonic hg38 BLCA TCGA-DK-A3IS-01A 3 6 In-Frame Intra-chr p16.3 p16.3 Seq+ 81574 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA3-DUSP15 NCOA3 chr20 47502019 + DUSP15 chr20 31867153 - Exonic hg38 BLCA TCGA-DK-A3IS-01A 1 8 5'UTR-5'UTR Intra-chr q13.12 Transcription factor q11.21 Seq+ 81575 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMYM6-ACOX3 ZMYM6 chr1 35030547 - ACOX3 chr4 8373628 - Exonic hg38 BLCA TCGA-DK-A3IS-01A 1 3 Out-of-frame Inter-chr p34.3 p16.1 81576 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACOX3-VAMP7 ACOX3 chr4 8428351 - VAMP7 chrY 57126221 + Exonic hg38 BLCA TCGA-DK-A3IS-01A 1 1 5'UTR-5'UTR Inter-chr p16.1 q28 81577 ChimerSeq TCGA FAWG TCGA_RNA-Seq C6orf132-GUCA1B C6orf132 chr6 42110216 - GUCA1B chr6 42188731 - Exonic hg38 BLCA TCGA-DK-A3IT-01A 3 5 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 81578 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARL-ABCC5 PARL chr3 183884722 - ABCC5 chr3 183938060 - Exonic hg38 BLCA TCGA-DK-A3IT-01A 2 8 Out-of-frame Intra-chr q27.1 q27.1 Seq+ 81579 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACOX1-SRP68 ACOX1 chr17 75978534 - SRP68 chr17 76067330 - Exonic hg38 BLCA TCGA-DK-A3IT-01A 1 10 In-Frame Intra-chr q25.1 q25.1 Seq+ 81580 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTA2-HNRNPUL2 MTA2 chr11 62600622 - HNRNPUL2 chr11 62724426 - Exonic hg38 BLCA TCGA-DK-A3IT-01A 2 6 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 81581 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC12A6-GOLGA8A SLC12A6 chr15 34336410 - GOLGA8A chr15 34391426 - Exonic hg38 BLCA TCGA-DK-A3IT-01A 3 2 CDS-5'UTR Intra-chr q14 q14 Seq+ 81582 ChimerSeq TCGA FAWG TCGA_RNA-Seq STX8-MYOCD STX8 chr17 9568371 - MYOCD chr17 12705128 + Exonic hg38 BLCA TCGA-DK-A3IT-01A 2 1 Out-of-frame Intra-chr p13.1 p12 Seq+ 81583 ChimerSeq TCGA FAWG TCGA_RNA-Seq IRF6-GRHL3 IRF6 chr1 209805947 - GRHL3 chr1 24331426 + Exonic hg38 BLCA TCGA-DK-A3IT-01A 1 2 5'UTR-5'UTR Intra-chr q32.2 Transcription factor p36.11 Transcription factor 81584 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPX2-REM1 TPX2 chr20 31757582 + REM1 chr20 31482287 + Exonic hg38 BLCA TCGA-DK-A3IV-01A 12 30 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 81585 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPC4AP-ASIP TRPC4AP chr20 35035123 - ASIP chr20 34260365 + Exonic hg38 BLCA TCGA-DK-A3IV-01A 7 34 CDS-5'UTR Intra-chr q11.22 q11.22 Seq+ 81586 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS41-NPSR1 VPS41 chr7 38869146 - NPSR1 chr7 34811770 + Exonic hg38 BLCA TCGA-DK-A3IV-01A 3 23 In-Frame Intra-chr p14.1 p14.3 Seq+ 81587 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANLN-POU6F2 ANLN chr7 36443862 + POU6F2 chr7 39085860 + Exonic hg38 BLCA TCGA-DK-A3IV-01A 2 3 In-Frame Intra-chr p14.2 p14.1 Tumor suppressor gene Transcription factor Seq+ 81588 ChimerSeq TCGA FAWG TCGA_RNA-Seq EMC2-TANK EMC2 chr8 108470121 + TANK chr2 161163114 + Exonic hg38 BLCA TCGA-DK-A3WW-01A 1 1 5'UTR-5'UTR Inter-chr q23.1 q24.2 Tumor suppressor gene 81589 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA6-KISS1 PLEKHA6 chr1 204367799 - KISS1 chr1 204192914 - Exonic hg38 BLCA TCGA-DK-A3WX-01A 2 5 5'UTR-5'UTR Intra-chr q32.1 q32.1 Tumor suppressor gene 81590 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCTD20-ETV7 KCTD20 chr6 36443111 + ETV7 chr6 36354687 - Exonic hg38 BLCA TCGA-DK-A3WY-01A 7 26 5'UTR-CDS Intra-chr p21.31 p21.31 Transcription factor Seq+ 81591 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHLDB2-KCNAB1 PHLDB2 chr3 111859576 + KCNAB1 chr3 156421616 + Exonic hg38 BLCA TCGA-DK-A3WY-01A 2 4 5'UTR-CDS Intra-chr q13.2 q25.31 Seq+ 81592 ChimerSeq TCGA FAWG TCGA_RNA-Seq FXYD3-TARM1 FXYD3 chr19 35119416 + TARM1 chr19 54075918 - Exonic hg38 BLCA TCGA-DK-A3X2-01A 10 168 CDS-5'UTR Intra-chr q13.12 Seq+ 81593 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSG4-DSCAS DSG4 chr18 31409808 + DSCAS chr18 31162535 + Exonic hg38 BLCA TCGA-DK-A3X2-01A 19 60 CDS-5'UTR Intra-chr q12.1 q12.1 81594 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFP30-CEACAM7 ZFP30 chr19 37644610 - CEACAM7 chr19 41687221 - Exonic hg38 BLCA TCGA-DK-A3X2-01A 20 44 CDS-3'UTR Intra-chr q13.12 Transcription factor Seq+ 81595 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDC1-GLIS1 NDC1 chr1 53818971 - GLIS1 chr1 53600278 - Exonic hg38 BLCA TCGA-DK-A3X2-01A 12 19 In-Frame Intra-chr p32.3 p32.3 Transcription factor 81596 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPEN-EFHD2 SPEN chr1 15848150 + EFHD2 chr1 15425871 + Exonic hg38 BLCA TCGA-DK-A3X2-01A 8 32 In-Frame Intra-chr p36.21 Transcription factor p36.21 Seq+ 81597 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP85-KCTD2 NUP85 chr17 75213119 + KCTD2 chr17 75049220 + Exonic hg38 BLCA TCGA-DK-A3X2-01A 1 11 In-Frame Intra-chr q25.1 q25.1 Seq+ 81598 ChimerSeq TCGA FAWG TCGA_RNA-Seq HERC1-DAPK2 HERC1 chr15 63833827 - DAPK2 chr15 63939361 - Exonic hg38 BLCA TCGA-DK-A3X2-01A 2 6 5'UTR-CDS Intra-chr q22.31 q22.31 CAMK:DAPK Tumor suppressor gene Seq+ 81599 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSPL-WRN CTDSPL chr3 37862278 + WRN chr8 31096768 + Exonic hg38 BLCA TCGA-DK-A3X2-01A 1 6 Out-of-frame Inter-chr p22.2 Tumor suppressor gene p12 Oncogene Seq+ 81600 ChimerSeq TCGA FAWG TCGA_RNA-Seq UHRF2-IL33 UHRF2 chr9 6413643 + IL33 chr9 6241684 + Exonic hg38 BLCA TCGA-DK-A3X2-01A 1 6 5'UTR-5'UTR Intra-chr p24.1 Tumor suppressor gene p24.1 81601 ChimerSeq TCGA FAWG TCGA_RNA-Seq MELTF-IGSF11 MELTF chr3 197003901 - IGSF11 chr3 118905718 - Exonic hg38 BLCA TCGA-DK-A3X2-01A 1 3 In-Frame Intra-chr q29 q13.32 81602 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH3-CHKA CDH3 chr16 68684824 + CHKA chr11 68068937 - Exonic hg38 BLCA TCGA-DK-A6AV-01A 68 400 In-Frame Inter-chr q22.1 q13.2 Seq+ 81603 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KB2-ST3GAL2 RPS6KB2 chr11 67429595 + ST3GAL2 chr16 70388546 - Exonic hg38 BLCA TCGA-DK-A6AV-01A 2 27 Out-of-frame Inter-chr q13.2 q22.1 Seq+ 81604 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANGO6-FGF3 TANGO6 chr16 68930295 + FGF3 chr11 69816423 - Exonic hg38 BLCA TCGA-DK-A6AV-01A 2 7 In-Frame Inter-chr q22.1 q13.3 Seq+ 81605 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRS2-DCDC2 MRS2 chr6 24405241 + DCDC2 chr6 24205102 - Exonic hg38 BLCA TCGA-DK-A6B1-01A 3 37 Out-of-frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 81606 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH1L-SPRR2G ASH1L chr1 155438327 - SPRR2G chr1 153150131 - Exonic hg38 BLCA TCGA-DK-A6B1-01A 2 5 CDS-5'UTR Intra-chr q22 Transcription factor q21.3 Seq+ 81607 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKRN1-DENND2A MKRN1 chr7 140471883 - DENND2A chr7 140546939 - Exonic hg38 BLCA TCGA-DK-A6B2-01A 31 179 Out-of-frame Intra-chr q34 q34 Seq+ 81608 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCGF3-MYL5 PCGF3 chr4 744688 + MYL5 chr4 680509 + Exonic hg38 BLCA TCGA-DK-A6B2-01A 30 169 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 81609 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERINC2-PFDN2 SERINC2 chr1 31413304 + PFDN2 chr1 161102375 - Exonic hg38 BLCA TCGA-DK-A6B2-01A 30 139 In-Frame Intra-chr p35.2 q23.3 Seq+ 81610 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN15-HK1 TSPAN15 chr10 69498396 + HK1 chr10 69343827 + Exonic hg38 BLCA TCGA-DK-A6B2-01A 24 147 In-Frame Intra-chr q22.1 q22.1 Seq+ 81611 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARCH9-SUCLG2P2 2019_ 3_ 9_ chr12 57760086 + SUCLG2P2 chr12 94548658 + Exonic hg38 BLCA TCGA-DK-A6B2-01A 10 75 Out-of-frame Intra-chr q14.1 q22 81612 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP2-ABR SENP2 chr3 185590169 + ABR chr17 1011985 - Exonic hg38 BLCA TCGA-DK-A6B2-01A 14 43 CDS-5'UTR Inter-chr q27.2 p13.3 Seq+ 81613 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS15L1-BCAR4 EPS15L1 chr19 16471913 - BCAR4 chr16 11820297 - Exonic hg38 BLCA TCGA-DK-A6B2-01A 14 32 3'UTR-3'UTR Inter-chr p13.11 p13.13 Seq+ 81614 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBLN1-SMC1B FBLN1 chr22 45503064 + SMC1B chr22 45408898 - Exonic hg38 BLCA TCGA-DK-A6B2-01A 7 9 In-Frame Intra-chr q13.31 Tumor suppressor gene q13.31 Seq+ 81615 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP2A2-TSPAN4 AP2A2 chr11 926088 + TSPAN4 chr11 864437 + Exonic hg38 BLCA TCGA-DK-A6B2-01A 3 21 3'UTR-CDS Intra-chr p15.5 p15.5 Seq+ 81616 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRR-ATP2B1 PTPRR chr12 70745818 - ATP2B1 chr12 89656107 - Exonic hg38 BLCA TCGA-DK-A6B2-01A 1 25 CDS-5'UTR Intra-chr q15 q21.33 81617 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPOT-EPYC XPOT chr12 64439315 + EPYC chr12 91002578 - Exonic hg38 BLCA TCGA-DK-A6B2-01A 1 15 CDS-5'UTR Intra-chr q14.2 q21.33 81618 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNT1-ADCY6 CCNT1 chr12 48701013 - ADCY6 chr12 48783438 - Exonic hg38 BLCA TCGA-DK-A6B2-01A 1 3 CDS-5'UTR Intra-chr q13.12 q13.12 Seq+ 81619 ChimerSeq TCGA FAWG TCGA_RNA-Seq FSCN1-EIF2AK1 FSCN1 chr7 5593768 + EIF2AK1 chr7 6026961 - Exonic hg38 BLCA TCGA-DK-A6B5-01A 235 494 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 81620 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAF1-NXPH1 RAF1 chr3 12663813 - NXPH1 chr7 8751008 + Exonic hg38 BLCA TCGA-DK-A6B5-01A 13 41 5'UTR-CDS Inter-chr p25.2 TKL:RAF Oncogene p21.3 Seq+ 81621 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP162-TTC33 CEP162 chr6 84193609 - TTC33 chr5 40613381 - Exonic hg38 BLCA TCGA-DK-A6B5-01A 3 18 CDS-3'UTR Inter-chr q14.3 p13.1 81622 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX14-OSTM1 SNX14 chr6 85593579 - OSTM1 chr6 108122714 - Exonic hg38 BLCA TCGA-DK-A6B5-01A 4 1 5'UTR-5'UTR Intra-chr q14.3 q21 81623 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPN1-TNKS1BP1 CAPN1 chr11 65183592 + TNKS1BP1 chr11 57301041 - Exonic hg38 BLCA TCGA-DK-A6B5-01A 1 1 In-Frame Intra-chr q13.1 q12.1 81624 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPS2-CTTN COPS2 chr15 49155525 - CTTN chr11 70405265 + Exonic hg38 BLCA TCGA-DK-A6B6-01A 4 20 CDS-5'UTR Inter-chr q21.1 Tumor suppressor gene q13.3 Seq+ 81625 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESYT1-PA2G4 ESYT1 chr12 56128709 + PA2G4 chr12 56106588 + Exonic hg38 BLCA TCGA-DK-A6B6-01A 3 8 Out-of-frame Intra-chr q13.2 q13.2 Transcription factor Seq+ 81626 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTR5-ZNF682 ACTR5 chr20 38756039 + ZNF682 chr19 20015842 - Exonic hg38 BLCA TCGA-DK-AA6L-01A 2 3 Out-of-frame Inter-chr q11.23 p12 Transcription factor 81627 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELF1-UBL3 ELF1 chr13 41060838 - UBL3 chr13 29777263 - Exonic hg38 BLCA TCGA-DK-AA6P-01A 26 33 5'UTR-CDS Intra-chr q14.11 Transcription factor q12.3 Seq+ 81628 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAN1C1-TMEM50A MAN1C1 chr1 25763967 + TMEM50A chr1 25360660 + Exonic hg38 BLCA TCGA-DK-AA6P-01A 11 29 Out-of-frame Intra-chr p36.11 p36.11 Seq+ 81629 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP8A2-ALG5 ATP8A2 chr13 25862408 + ALG5 chr13 36985740 - Exonic hg38 BLCA TCGA-DK-AA6P-01A 9 22 In-Frame Intra-chr q12.13 q13.3 Seq+ 81630 ChimerSeq TCGA FAWG TCGA_RNA-Seq B3GLCT-ALOX5AP B3GLCT chr13 31323895 + ALOX5AP chr13 30755944 + Exonic hg38 BLCA TCGA-DK-AA6P-01A 2 41 Out-of-frame Intra-chr q12.3 q12.3 81631 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL41-SMARCC2 RPL41 chr12 56116799 + SMARCC2 chr12 56186240 - Exonic hg38 BLCA TCGA-DK-AA6P-01A 2 17 In-Frame Intra-chr q13.2 q13.2 Seq+ 81632 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERCC2-NOVA2 ERCC2 chr19 45368630 - NOVA2 chr19 45940945 - Exonic hg38 BLCA TCGA-DK-AA6P-01A 3 10 In-Frame Intra-chr q13.32 Oncogene q13.32 Seq+ 81633 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD9A-AHNAK RAD9A chr11 67321333 + AHNAK chr11 62433891 - Exonic hg38 BLCA TCGA-DK-AA6P-01A 4 1 5'UTR-CDS Intra-chr q13.2 q12.3 Tumor suppressor gene 81634 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBL3-CDK8 UBL3 chr13 29849512 - CDK8 chr13 26337567 + Exonic hg38 BLCA TCGA-DK-AA6P-01A 3 4 Out-of-frame Intra-chr q12.3 q12.13 CMGC:CDK Oncogene Seq+ 81635 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAP1-MAD1L1 ADAP1 chr7 926553 - MAD1L1 chr7 2069338 - Exonic hg38 BLCA TCGA-DK-AA6P-01A 2 5 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 81636 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF3L-TRIOBP EIF3L chr22 37855644 + TRIOBP chr22 37754877 + Exonic hg38 BLCA TCGA-DK-AA6P-01A 1 8 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 81637 ChimerSeq TCGA FAWG TCGA_RNA-Seq C12orf56-TMEM5 C12orf56 chr12 64390314 - TMEM5 chr12 63805234 + Exonic hg38 BLCA TCGA-DK-AA6P-01A 1 7 Out-of-frame Intra-chr q14.2 q14.2 81638 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRK-SAMD3 PTPRK chr6 128397566 - SAMD3 chr6 130184623 - Exonic hg38 BLCA TCGA-DK-AA6P-01A 1 5 5'UTR-CDS Intra-chr Tumor suppressor gene q23.1 Seq+ 81639 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAT-FAM21EP CAT chr11 34464235 + FAM21EP chr10 50021467 - Exonic hg38 BLCA TCGA-DK-AA6R-01A 140 485 CDS-3'UTR Inter-chr p13 Tumor suppressor gene q11.23 81640 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALG14-JAK1 ALG14 chr1 95027129 - JAK1 chr1 64847675 - Exonic hg38 BLCA TCGA-DK-AA6R-01A 2 16 In-Frame Intra-chr p21.3 p31.3 TK:JakA Oncogene Seq+ 81641 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB27B-WDR7 RAB27B chr18 54828700 + WDR7 chr18 56879944 + Exonic hg38 BLCA TCGA-DK-AA6R-01A 2 12 5'UTR-CDS Intra-chr q21.2 q21.31 Seq+ 81642 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R10-FLOT1 PPP1R10 chr6 30616478 - FLOT1 chr6 30731100 - Exonic hg38 BLCA TCGA-DK-AA6S-01A 2 9 5'UTR-5'UTR Intra-chr Seq+ 81643 ChimerSeq TCGA FAWG TCGA_RNA-Seq FANCI-ABHD2 FANCI chr15 89278774 + ABHD2 chr15 89175812 + Exonic hg38 BLCA TCGA-DK-AA6S-01A 1 8 In-Frame Intra-chr q26.1 q26.1 Seq+ 81644 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNQ5-CRYL1 KCNQ5 chr6 73042062 + CRYL1 chr13 20432296 - Exonic hg38 BLCA TCGA-DK-AA6T-01A 2 7 Out-of-frame Inter-chr q13 q12.11 Seq+ 81645 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKAL1-DNAH8 CDKAL1 chr6 20535394 + DNAH8 chr6 38882910 + Exonic hg38 BLCA TCGA-DK-AA6U-01A 18 60 5'UTR-CDS Intra-chr p22.3 p21.2 Seq+ 81646 ChimerSeq TCGA FAWG TCGA_RNA-Seq URI1-SLC35F1 URI1 chr19 29986417 + SLC35F1 chr6 118275459 + Exonic hg38 BLCA TCGA-DK-AA6U-01A 11 10 In-Frame Inter-chr q12 q22.2 Seq+ 81647 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABHD8-ILKAP ABHD8 chr19 17300856 - ILKAP chr2 238171024 - Exonic hg38 BLCA TCGA-DK-AA6U-01A 7 17 In-Frame Inter-chr p13.11 q37.3 Seq+ 81648 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNK17-DNAH8 KCNK17 chr6 39303957 - DNAH8 chr6 38921369 + Exonic hg38 BLCA TCGA-DK-AA6U-01A 2 8 Out-of-frame Intra-chr p21.2 p21.2 81649 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACOX1-PPP2R3B ACOX1 chr17 75960215 - PPP2R3B chrY 361590 - Exonic hg38 BLCA TCGA-DK-AA6U-01A 2 5 CDS-5'UTR Inter-chr q25.1 p22.33 Seq+ 81650 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPARG-MKRN2OS PPARG chr3 12312453 + MKRN2OS chr3 12542022 - Exonic hg38 BLCA TCGA-DK-AA6U-01A 1 5 5'UTR-CDS Intra-chr p25.2 Oncogene Tumor suppressor gene Transcription factor p25.2 81651 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFAND3-CCNE1 ZFAND3 chr6 37820016 + CCNE1 chr19 29812532 + Exonic hg38 BLCA TCGA-DK-AA6U-01A 1 1 CDS-5'UTR Inter-chr p21.2 q12 Oncogene 81652 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERCC6L2-PTPRD ERCC6L2 chr9 95928864 + PTPRD chr9 9018735 - Exonic hg38 BLCA TCGA-DK-AA6W-01A 6 1 CDS-5'UTR Intra-chr q22.32 Oncogene Tumor suppressor gene 81653 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF727-VPS50 ZNF727 chr7 64045624 + VPS50 chr7 93271220 + Exonic hg38 BLCA TCGA-DK-AA6W-01A 2 12 Out-of-frame Intra-chr q11.21 Transcription factor q21.2 81654 ChimerSeq TCGA FAWG TCGA_RNA-Seq QTRT2-NAA50 QTRT2 chr3 114057106 + NAA50 chr3 113721937 - Exonic hg38 BLCA TCGA-DK-AA6W-01A 2 1 5'UTR-CDS Intra-chr q13.31 q13.31 81655 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-SPACA3 NF1 chr17 31169997 + SPACA3 chr17 32996843 + Exonic hg38 BLCA TCGA-DK-AA6X-01A 13 21 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 81656 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNMB4-MSRB3 KCNMB4 chr12 70367070 + MSRB3 chr12 65488004 + Exonic hg38 BLCA TCGA-DK-AA75-01A 11 132 CDS-3'UTR Intra-chr q15 q14.3 Seq+ 81657 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCT2-CPM CCT2 chr12 69586344 + CPM chr12 68842329 - Exonic hg38 BLCA TCGA-DK-AA75-01A 2 30 CDS-3'UTR Intra-chr q15 q15 Seq+ 81658 ChimerSeq TCGA FAWG TCGA_RNA-Seq PACS1-STPG1 PACS1 chr11 66070842 + STPG1 chr1 24361041 - Exonic hg38 BLCA TCGA-DK-AA75-01A 6 12 In-Frame Inter-chr q13.1 p36.11 81659 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOSL1-HN1 FOSL1 chr11 65900241 - HN1 chr17 75136250 - Exonic hg38 BLCA TCGA-DK-AA75-01A 3 8 Out-of-frame Inter-chr q13.1 Transcription factor Seq+ 81660 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKAL1-MSRB3 CDKAL1 chr6 21108463 + MSRB3 chr12 65488004 + Exonic hg38 BLCA TCGA-DK-AA75-01A 2 6 CDS-3'UTR Inter-chr p22.3 q14.3 Seq+ 81661 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANXA4-GKN1 ANXA4 chr2 69781574 + GKN1 chr2 68977495 + Exonic hg38 BLCA TCGA-DK-AA75-01A 1 8 In-Frame Intra-chr p13.3 p13.3 Tumor suppressor gene Seq+ 81662 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM135-FGD5 TMEM135 chr11 87236684 + FGD5 chr3 14880572 + Exonic hg38 BLCA TCGA-DK-AA75-01A 2 3 Out-of-frame Inter-chr q14.2 p25.1 Seq+ 81663 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPR1-DEDD XPR1 chr1 180682411 + DEDD chr1 161124526 - Exonic hg38 BLCA TCGA-DK-AA75-01A 1 6 5'UTR-5'UTR Intra-chr q25.3 q23.3 Seq+ 81664 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSEN2-SYN2 TSEN2 chr3 12505231 + SYN2 chr3 12140651 + Exonic hg38 BLCA TCGA-DK-AA75-01A 2 1 Out-of-frame Intra-chr p25.2 p25.2 Seq+ 81665 ChimerSeq TCGA FAWG TCGA_RNA-Seq LCOR-MAP2K6 LCOR chr10 96907747 + MAP2K6 chr17 69524901 + Exonic hg38 BLCA TCGA-DK-AA76-01A 6 44 5'UTR-CDS Inter-chr q24.1 Transcription factor q24.3 STE:STE7 Seq+ 81666 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARPP19-MYO5A ARPP19 chr15 52568848 - MYO5A chr15 52314203 - Exonic hg38 BLCA TCGA-DK-AA76-01A 3 19 In-Frame Intra-chr q21.2 q21.2 Seq+ 81667 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPKAPK2-IL19 MAPKAPK2 chr1 206685508 + IL19 chr1 206836661 + Exonic hg38 BLCA TCGA-DK-AA76-01A 2 8 Out-of-frame Intra-chr q32.1 CAMK:MAPKAPK q32.1 81668 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOQ-CALM2 RHOQ chr2 46543812 + CALM2 chr2 47170764 - Exonic hg38 BLCA TCGA-DK-AA77-01A 5 11 In-Frame Intra-chr p21 p21 81669 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOQ-C2orf61 RHOQ chr2 46543812 + C2orf61 chr2 47170764 - Exonic hg38 BLCA TCGA-DK-AA77-01A 5 3 Out-of-frame Intra-chr p21 81670 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC11A-UBE2Q2P1 SEC11A chr15 84680713 - UBE2Q2P1 chr15 84546277 - Exonic hg38 BLCA TCGA-DK-AA77-01A 2 7 3'UTR-3'UTR Intra-chr q25.3 q25.2 81671 ChimerSeq TCGA FAWG TCGA_RNA-Seq KPNA3-FGF2 KPNA3 chr13 49746949 - FGF2 chr4 122876321 + Exonic hg38 BLCA TCGA-E5-A2PC-01A 40 161 Out-of-frame Inter-chr q14.2 q28.1 Seq+ 81672 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP155-TRIO NUP155 chr5 37314198 - TRIO chr5 14531744 + Exonic hg38 BLCA TCGA-E5-A2PC-01A 7 99 CDS-3'UTR Intra-chr p13.2 p15.2 Seq+ 81673 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOR1-CDRT4 NCOR1 chr17 16086282 - CDRT4 chr17 15440285 - Exonic hg38 BLCA TCGA-E5-A2PC-01A 5 40 CDS-5'UTR Intra-chr p11.2 Oncogene p12 Seq+ 81674 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO31-ZNRF1 FBXO31 chr16 87360295 - ZNRF1 chr16 75093572 + Exonic hg38 BLCA TCGA-E5-A4TZ-01A 13 39 In-Frame Intra-chr q24.2 Tumor suppressor gene q23.1 Seq+ 81675 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPO6-FBXO31 XPO6 chr16 28211366 - FBXO31 chr16 87360366 - Exonic hg38 BLCA TCGA-E5-A4TZ-01A 4 33 Out-of-frame Intra-chr p12.1 q24.2 Tumor suppressor gene Seq+ 81676 ChimerSeq TCGA FAWG TCGA_RNA-Seq FSCN1-EIF2AK1 FSCN1 chr7 5593768 + EIF2AK1 chr7 6026961 - Exonic hg38 BLCA TCGA-E5-A4TZ-01A 1 3 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 81677 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF4-CFAP99 RNF4 chr4 2500738 + CFAP99 chr4 2436874 + Exonic hg38 BLCA TCGA-E5-A4TZ-01A 1000 1000 In-Frame Intra-chr p16.3 p16.3 81678 ChimerSeq TCGA FAWG TCGA_RNA-Seq L3MBTL2-TEF L3MBTL2 chr22 41209933 + TEF chr22 41387351 + Exonic hg38 BLCA TCGA-E7-A3X6-01A 2 7 In-Frame Intra-chr q13.2 q13.2 Transcription factor Seq+ 81679 ChimerSeq TCGA FAWG TCGA_RNA-Seq HADHA-DNAJC27 HADHA chr2 26244530 - DNAJC27 chr2 24947748 - Exonic hg38 BLCA TCGA-E7-A3X6-01A 1 6 Out-of-frame Intra-chr p23.3 p23.3 Seq+ 81680 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIX-CRYBB3 NFIX chr19 12995864 + CRYBB3 chr22 25201377 + Exonic hg38 BLCA TCGA-E7-A4IJ-01A 4 7 CDS-5'UTR Inter-chr p13.13 Transcription factor q11.23 Seq+ 81681 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC28-ARHGAP15 TTC28 chr22 28163092 - ARHGAP15 chr2 143767989 + Exonic hg38 BLCA TCGA-E7-A4IJ-01A 2 8 Out-of-frame Inter-chr q12.1 q22.2 Seq+ 81682 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPHOSPH9-VPS37B MPHOSPH9 chr12 123194386 - VPS37B chr12 122871061 - Exonic hg38 BLCA TCGA-E7-A4IJ-01A 2 3 In-Frame Intra-chr q24.31 q24.31 Seq+ 81683 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNB-FAM25C PITPNB chr22 27910964 - FAM25C chr10 47995511 - Exonic hg38 BLCA TCGA-E7-A4IJ-01A 1 6 In-Frame Inter-chr q12.1 q11.22 81684 ChimerSeq TCGA FAWG TCGA_RNA-Seq LARGE1-EIF4ENIF1 LARGE1 chr22 33564848 - EIF4ENIF1 chr22 31488745 - Exonic hg38 BLCA TCGA-E7-A4IJ-01A 1 3 CDS-5'UTR Intra-chr q12.3 q12.2 81685 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX31-SPAG1 SNX31 chr8 100596639 - SPAG1 chr8 100259042 + Exonic hg38 BLCA TCGA-E7-A4XJ-01A 11 69 CDS-3'UTR Intra-chr q22.3 q22.2 81686 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-FLJ42969 PVT1 chr8 127794734 + FLJ42969 chr8 101054498 + Exonic hg38 BLCA TCGA-E7-A4XJ-01A 3 21 5'UTR-5'UTR Intra-chr q24.21 q22.3 81687 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM5B-PVT1 KDM5B chr1 202748945 - PVT1 chr8 127855155 + Exonic hg38 BLCA TCGA-E7-A4XJ-01A 2 7 CDS-5'UTR Inter-chr q32.1 Transcription factor q24.21 81688 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS1-PRKAR1B INTS1 chr7 1485098 - PRKAR1B chr7 697102 - Exonic hg38 BLCA TCGA-E7-A541-01A 2 19 Out-of-frame Intra-chr p22.3 p22.3 81689 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOS1AP-AHI1 NOS1AP chr1 162154476 + AHI1 chr6 135358187 - Exonic hg38 BLCA TCGA-E7-A541-01A 3 7 Out-of-frame Inter-chr q23.3 q23.3 Seq+ 81690 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL9-CERS5 OSBPL9 chr1 51714079 + CERS5 chr12 50144057 - Exonic hg38 BLCA TCGA-E7-A541-01A 2 4 Out-of-frame Inter-chr p32.3 q13.12 Seq+ 81691 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF322-KIF6 ZNF322 chr6 26658558 - KIF6 chr6 39431161 - Exonic hg38 BLCA TCGA-E7-A541-01A 2 1 5'UTR-CDS Intra-chr p22.2 Transcription factor p21.2 Seq+ 81692 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806934 + TACC3 chr4 1739702 + Exonic hg38 BLCA TCGA-E7-A5KE-01A 932 2895 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 81693 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP5H-HN1 ATP5H chr17 75042181 - HN1 chr17 75146684 - Exonic hg38 BLCA TCGA-E7-A5KE-01A 47 414 Out-of-frame Intra-chr q25.1 Seq+ 81694 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXNB1-HINT1 PLXNB1 chr3 48409571 - HINT1 chr5 131171733 - Exonic hg38 BLCA TCGA-E7-A5KE-01A 26 71 CDS-5'UTR Inter-chr p21.31 q23.3 Tumor suppressor gene 81695 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6R2-SELENOO PPP6R2 chr22 50372150 + SELENOO chr22 50215717 + Exonic hg38 BLCA TCGA-E7-A5KE-01A 23 77 5'UTR-CDS Intra-chr q13.33 q13.33 81696 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASC3-SIPA1L3 CASC3 chr17 40141607 + SIPA1L3 chr19 38206097 + Exonic hg38 BLCA TCGA-E7-A5KE-01A 3 33 In-Frame Inter-chr q21.1 q13.13 Seq+ 81697 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACOX1-SRP68 ACOX1 chr17 75953451 - SRP68 chr17 76050526 - Exonic hg38 BLCA TCGA-E7-A5KE-01A 4 24 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 81698 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPAP3-HDAC7 RPAP3 chr12 47701464 - HDAC7 chr12 47802274 - Exonic hg38 BLCA TCGA-E7-A5KE-01A 2 19 Out-of-frame Intra-chr q13.11 q13.11 Seq+ 81699 ChimerSeq TCGA FAWG TCGA_RNA-Seq LLGL2-EXOC7 LLGL2 chr17 75525825 + EXOC7 chr17 76087720 - Exonic hg38 BLCA TCGA-E7-A5KE-01A 3 7 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 81700 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF704-DLGAP1 ZNF704 chr8 80821374 - DLGAP1 chr18 3582248 - Exonic hg38 BLCA TCGA-E7-A5KE-01A 1 12 Out-of-frame Inter-chr q21.13 Transcription factor p11.31 Seq+ 81701 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHF-APOPT1 EHF chr11 34621228 + APOPT1 chr14 103571623 + Exonic hg38 BLCA TCGA-E7-A5KE-01A 1 11 Out-of-frame Inter-chr p13 Tumor suppressor gene Transcription factor q32.33 81702 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANK3-RHOBTB1 ANK3 chr10 60733263 - RHOBTB1 chr10 60892995 - Exonic hg38 BLCA TCGA-E7-A5KE-01A 1 6 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 81703 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDLIM7-FAM193B PDLIM7 chr5 177491807 - FAM193B chr5 177539147 - Exonic hg38 BLCA TCGA-E7-A5KE-01A 1 5 Out-of-frame Intra-chr q35.3 q35.3 Seq+ 81704 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT5B-UNC93B1 KMT5B chr11 68213477 - UNC93B1 chr11 68003175 - Exonic hg38 BLCA TCGA-E7-A5KF-01A 3 40 5'UTR-CDS Intra-chr q13.2 q13.2 81705 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMYM2-IFT88 ZMYM2 chr13 20082130 + IFT88 chr13 20638332 + Exonic hg38 BLCA TCGA-E7-A677-01A 1 15 Out-of-frame Intra-chr q12.11 q12.11 Tumor suppressor gene 81706 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKN2A-CAPZB CDKN2A chr9 21974678 - CAPZB chr1 19345252 - Exonic hg38 BLCA TCGA-E7-A6MD-01A 100 358 In-Frame Inter-chr p21.3 Oncogene Tumor suppressor gene p36.13 Seq+ 81707 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L1-RBBP8 EPB41L1 chr20 36178672 + RBBP8 chr18 22911600 + Exonic hg38 BLCA TCGA-E7-A6MD-01A 3 16 CDS-5'UTR Inter-chr q11.23 q11.2 Tumor suppressor gene 81708 ChimerSeq TCGA FAWG TCGA_RNA-Seq MFSD11-PRCD MFSD11 chr17 76742273 + PRCD chr17 76553109 + Exonic hg38 BLCA TCGA-E7-A6ME-01A 2 12 CDS-3'UTR Intra-chr q25.1 q25.1 81709 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM123-CENPP TMEM123 chr11 102448812 - CENPP chr9 92611314 + Exonic hg38 BLCA TCGA-E7-A7DV-01A 22 88 Out-of-frame Inter-chr q22.2 q22.31 Seq+ 81710 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFTN1-TMEM40 RFTN1 chr3 16513442 - TMEM40 chr3 12749840 - Exonic hg38 BLCA TCGA-E7-A7DV-01A 22 48 5'UTR-5'UTR Intra-chr p24.3 p25.2 Seq+ 81711 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM49B-MRPL13 FAM49B chr8 129903312 - MRPL13 chr8 120443308 - Exonic hg38 BLCA TCGA-E7-A7DV-01A 5 24 5'UTR-CDS Intra-chr q24.21 q24.12 Seq+ 81712 ChimerSeq TCGA FAWG TCGA_RNA-Seq B9D1-ALDH16A1 B9D1 chr17 19360320 - ALDH16A1 chr19 49458486 + Exonic hg38 BLCA TCGA-E7-A7DV-01A 6 2 In-Frame Inter-chr p11.2 q13.33 Seq+ 81713 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNK2-RECQL WNK2 chr9 93185610 + RECQL chr12 21470346 - Exonic hg38 BLCA TCGA-E7-A7DV-01A 1 13 In-Frame Inter-chr q22.31 Tumor suppressor gene p12.1 81714 ChimerSeq TCGA FAWG TCGA_RNA-Seq LCORL-CDKAL1 LCORL chr4 18021598 - CDKAL1 chr6 20955419 + Exonic hg38 BLCA TCGA-E7-A7DV-01A 2 3 In-Frame Inter-chr p15.31 Transcription factor p22.3 Seq+ 81715 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRIP1-C21orf91 NRIP1 chr21 15064745 - C21orf91 chr21 17793581 - Exonic hg38 BLCA TCGA-E7-A7DV-01A 2 2 5'UTR-CDS Intra-chr q21.1 q21.1 Seq+ 81716 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID2-SPATS1 ARID2 chr12 45893721 + SPATS1 chr6 44368379 + Exonic hg38 BLCA TCGA-E7-A7DV-01A 1 3 Out-of-frame Inter-chr q12 Oncogene Tumor suppressor gene Transcription factor p21.1 Seq+ 81717 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCBP2-ITGB7 PCBP2 chr12 53471807 + ITGB7 chr12 53191636 - Exonic hg38 BLCA TCGA-E7-A7PW-01A 119 222 Out-of-frame Intra-chr q13.13 q13.13 Seq+ 81718 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHRS2-IL25 DHRS2 chr14 23639895 + IL25 chr14 23375625 + Exonic hg38 BLCA TCGA-E7-A85H-01A 229 1020 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 81719 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAMP4-DAZAP1 SCAMP4 chr19 1905439 + DAZAP1 chr19 1417500 + Exonic hg38 BLCA TCGA-E7-A85H-01A 32 59 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 81720 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUPT6H-SARM1 SUPT6H chr17 28676231 + SARM1 chr17 28403820 + Exonic hg38 BLCA TCGA-E7-A85H-01A 14 108 Out-of-frame Intra-chr q11.2 q11.2 81721 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAT3-DAZAP1 ADAT3 chr19 1905439 + DAZAP1 chr19 1417500 + Exonic hg38 BLCA TCGA-E7-A85H-01A 32 14 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 81722 ChimerSeq TCGA FAWG TCGA_RNA-Seq AAAS-ATP5G2 AAAS chr12 53314298 - ATP5G2 chr12 53633066 - Exonic hg38 BLCA TCGA-E7-A85H-01A 10 34 Out-of-frame Intra-chr q13.13 q13.13 81723 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSPC1-ACTR8 PSPC1 chr13 19730239 - ACTR8 chr3 53880109 - Exonic hg38 BLCA TCGA-E7-A85H-01A 12 25 In-Frame Inter-chr q12.11 p21.1 Seq+ 81724 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM41A-LIPH TMEM41A chr3 185494623 - LIPH chr3 185507352 - Exonic hg38 BLCA TCGA-E7-A85H-01A 7 34 CDS-3'UTR Intra-chr q27.2 q27.2 81725 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH1L-ARHGEF2 ASH1L chr1 155341936 - ARHGEF2 chr1 156003729 - Exonic hg38 BLCA TCGA-E7-A85H-01A 2 38 CDS-5'UTR Intra-chr q22 Transcription factor q22 Seq+ 81726 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFAF6-INTS8 NDUFAF6 chr8 94958179 + INTS8 chr8 94873374 + Exonic hg38 BLCA TCGA-E7-A85H-01A 3 20 5'UTR-5'UTR Intra-chr q22.1 q22.1 81727 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB27A-DYX1C1 RAB27A chr15 55270165 - DYX1C1 chr15 55439581 - Exonic hg38 BLCA TCGA-E7-A85H-01A 4 13 Out-of-frame Intra-chr q21.3 Seq+ 81728 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPME1-YIF1A PPME1 chr11 74204445 + YIF1A chr11 66287676 - Exonic hg38 BLCA TCGA-E7-A85H-01A 3 8 In-Frame Intra-chr q13.4 q13.2 Seq+ 81729 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE3C-FAF1 UBE3C chr7 157225539 + FAF1 chr1 50596216 - Exonic hg38 BLCA TCGA-E7-A85H-01A 2 12 Out-of-frame Inter-chr q36.3 p32.3 Seq+ 81730 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPP3-SPATA6 DPP3 chr11 66493633 + SPATA6 chr1 48453131 - Exonic hg38 BLCA TCGA-E7-A85H-01A 4 3 In-Frame Inter-chr q13.2 p33 Seq+ 81731 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP350-TOR1AIP1 CEP350 chr1 180012075 + TOR1AIP1 chr1 179900126 + Exonic hg38 BLCA TCGA-E7-A85H-01A 2 6 In-Frame Intra-chr q25.2 q25.2 Seq+ 81732 ChimerSeq TCGA FAWG TCGA_RNA-Seq NBN-RIPK2 NBN chr8 89964410 - RIPK2 chr8 89784050 + Exonic hg38 BLCA TCGA-E7-A85H-01A 2 3 Out-of-frame Intra-chr q21.3 Oncogene Tumor suppressor gene q21.3 TKL:RIPK Seq+ 81733 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRYL-NKAIN3 FRYL chr4 48780078 - NKAIN3 chr8 62579539 + Exonic hg38 BLCA TCGA-E7-A85H-01A 1 6 5'UTR-5'UTR Inter-chr p11 q12.3 Seq+ 81734 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRL3-PGLYRP2 ADGRL3 chr4 61813889 + PGLYRP2 chr19 15479435 - Exonic hg38 BLCA TCGA-E7-A85H-01A 1 5 CDS-5'UTR Inter-chr q13.1 Oncogene p13.12 81735 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENSA-RPRD2 ENSA chr1 150627467 - RPRD2 chr1 150457288 + Exonic hg38 BLCA TCGA-E7-A85H-01A 1 3 In-Frame Intra-chr q21.3 q21.2 81736 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMB3-KIAA1257 PSMB3 chr17 38753334 + KIAA1257 chr3 128910333 - Exonic hg38 BLCA TCGA-E7-A97Q-01A 30 85 3'UTR-CDS Inter-chr q21.3 81737 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D15-NPIPB2 TBC1D15 chr12 71897941 + NPIPB2 chr16 11929445 - Exonic hg38 BLCA TCGA-FD-A3B3-01A 8 70 Out-of-frame Inter-chr q21.1 p13.13 81738 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM49B-ZNF826P FAM49B chr8 129903312 - ZNF826P chr19 20341101 - Exonic hg38 BLCA TCGA-FD-A3B3-01A 12 47 5'UTR-3'UTR Inter-chr q24.21 p12 81739 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH2L-FAM110B ASH2L chr8 38110833 + FAM110B chr8 58197831 + Exonic hg38 BLCA TCGA-FD-A3B3-01A 8 35 CDS-3'UTR Intra-chr p11.23 q12.1 81740 ChimerSeq TCGA FAWG TCGA_RNA-Seq GDI2-ZNF526 GDI2 chr10 5813214 - ZNF526 chr19 42224215 + Exonic hg38 BLCA TCGA-FD-A3B3-01A 4 7 CDS-5'UTR Inter-chr p15.1 q13.2 Transcription factor Seq+ 81741 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHRS4-SCFD1 DHRS4 chr14 23953916 + SCFD1 chr14 30633947 + Exonic hg38 BLCA TCGA-FD-A3B3-01A 2 9 3'UTR-CDS Intra-chr q11.2 q12 Seq+ 81742 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID4A-L3HYPDH ARID4A chr14 58347878 + L3HYPDH chr14 59479351 - Exonic hg38 BLCA TCGA-FD-A3B3-01A 2 6 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 81743 ChimerSeq TCGA FAWG TCGA_RNA-Seq LGALS8-RHBG LGALS8 chr1 236526115 + RHBG chr1 156374607 + Exonic hg38 BLCA TCGA-FD-A3B4-01A 1 18 CDS-5'UTR Intra-chr q43 q22 Seq+ 81744 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABLIM2-PPP2R2C ABLIM2 chr4 8077628 - PPP2R2C chr4 6378572 - Exonic hg38 BLCA TCGA-FD-A3B4-01A 1 7 In-Frame Intra-chr p16.1 p16.1 Tumor suppressor gene Seq+ 81745 ChimerSeq TCGA FAWG TCGA_RNA-Seq NACC1-CCDC74B NACC1 chr19 13118454 + CCDC74B chr2 130143313 - Exonic hg38 BLCA TCGA-FD-A3B6-01A 31 3 5'UTR-CDS Inter-chr p13.13 q21.1 Seq+ 81746 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIMP3-SYN3 TIMP3 chr22 32802122 + SYN3 chr22 32629868 - Exonic hg38 BLCA TCGA-FD-A3B6-01A 14 42 Out-of-frame Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 81747 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADORA2B-SYN3 ADORA2B chr17 15945583 + SYN3 chr22 32596736 - Exonic hg38 BLCA TCGA-FD-A3B6-01A 9 26 Out-of-frame Inter-chr p12 q12.3 Seq+ 81748 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCA7-CIRBP ABCA7 chr19 1049437 + CIRBP chr19 1264253 + Exonic hg38 BLCA TCGA-FD-A3B6-01A 5 12 CDS-5'UTR Intra-chr p13.3 p13.3 81749 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADORA2B-TIMP3 ADORA2B chr17 15945583 + TIMP3 chr22 32801769 + Exonic hg38 BLCA TCGA-FD-A3B6-01A 5 7 CDS-5'UTR Inter-chr p12 q12.3 Oncogene Tumor suppressor gene Seq+ 81750 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICU1-NRG3 MICU1 chr10 72475100 - NRG3 chr10 82358739 + Exonic hg38 BLCA TCGA-FD-A3B6-01A 1 8 Out-of-frame Intra-chr q22.1 q23.1 81751 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2B1-SHCBP1 ATP2B1 chr12 89655679 - SHCBP1 chr16 46604461 - Exonic hg38 BLCA TCGA-FD-A3B6-01A 1 3 Out-of-frame Inter-chr q21.33 q11.2 81752 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO18A-JAGN1 MYO18A chr17 29165942 - JAGN1 chr3 9892915 + Exonic hg38 BLCA TCGA-FD-A3B6-01A 1 2 Out-of-frame Inter-chr q11.2 Oncogene p25.3 81753 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCA5-LRBA SMARCA5 chr4 143548140 + LRBA chr4 150436864 - Exonic hg38 BLCA TCGA-FD-A3B7-01A 6 15 In-Frame Intra-chr q31.21 q31.3 Seq+ 81754 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGFR-GYG1 EGFR chr7 55019365 + GYG1 chr3 148994142 + Exonic hg38 BLCA TCGA-FD-A3B7-01A 2 1 In-Frame Inter-chr p11.2 TK:EGFR Oncogene q24 Seq+ 81755 ChimerSeq TCGA FAWG TCGA_RNA-Seq LSM3-MRPL22 LSM3 chr3 14184032 + MRPL22 chr5 154956371 + Exonic hg38 BLCA TCGA-FD-A3B7-01A 2 1 In-Frame Inter-chr p25.1 q33.2 Seq+ 81756 ChimerSeq TCGA FAWG TCGA_RNA-Seq OTUD4-CHCHD2 OTUD4 chr4 145159503 - CHCHD2 chr7 56104475 - Exonic hg38 BLCA TCGA-FD-A3B7-01A 1 2 In-Frame Inter-chr q31.21 p11.2 81757 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARIH2-RHOA ARIH2 chr3 48922811 + RHOA chr3 49375591 - Exonic hg38 BLCA TCGA-FD-A3B8-01A 4 24 5'UTR-5'UTR Intra-chr p21.31 p21.31 Oncogene Tumor suppressor gene Seq+ 81758 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF16B-RRBP1 KIF16B chr20 16494291 - RRBP1 chr20 17660528 - Exonic hg38 BLCA TCGA-FD-A3B8-01A 1 3 CDS-5'UTR Intra-chr p12.1 p12.1 Seq+ 81759 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTSS1-TATDN1 MTSS1 chr8 124699526 - TATDN1 chr8 124488696 - Exonic hg38 BLCA TCGA-FD-A3N5-01A 18 67 Out-of-frame Intra-chr q24.13 Tumor suppressor gene q24.13 Seq+ 81760 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCY9-TFAP4 ADCY9 chr16 4113750 - TFAP4 chr16 4260595 - Exonic hg38 BLCA TCGA-FD-A3N6-01A 1 10 Out-of-frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 81761 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN6-P3H3 PTPN6 chr12 6957785 + P3H3 chr12 6839000 + Exonic hg38 BLCA TCGA-FD-A3NA-01A 4 33 In-Frame Intra-chr p13.31 Tumor suppressor gene p13.31 81762 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCCPDH-CNST SCCPDH chr1 246744125 + CNST chr1 246647139 + Exonic hg38 BLCA TCGA-FD-A3NA-01A 6 20 Out-of-frame Intra-chr q44 q44 Seq+ 81763 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT2A-STAT5B KAT2A chr17 42117035 - STAT5B chr17 42202808 - Exonic hg38 BLCA TCGA-FD-A3NA-01A 2 10 Out-of-frame Intra-chr q21.2 q21.2 Transcription factor Seq+ 81764 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAR3-EVI5 BCAR3 chr1 93571670 - EVI5 chr1 92736627 - Exonic hg38 BLCA TCGA-FD-A3NA-01A 3 5 In-Frame Intra-chr p22.1 p22.1 Seq+ 81765 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2AK2-CEBPZ EIF2AK2 chr2 37135484 - CEBPZ chr2 37201903 - Exonic hg38 BLCA TCGA-FD-A3NA-01A 1 11 Out-of-frame Intra-chr p22.2 p22.2 Transcription factor Seq+ 81766 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRC2C-NLRP8 PRRC2C chr1 171591204 + NLRP8 chr19 55973652 + Exonic hg38 BLCA TCGA-FD-A3SJ-01A 27 139 Out-of-frame Inter-chr q24.3 q13.43 81767 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R5D-UBR2 PPP2R5D chr6 42989688 + UBR2 chr6 42684794 + Exonic hg38 BLCA TCGA-FD-A3SJ-01A 8 84 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 81768 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOA-CACNA2D2 RHOA chr3 49411820 - CACNA2D2 chr3 50394168 - Exonic hg38 BLCA TCGA-FD-A3SJ-01A 7 38 5'UTR-CDS Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Seq+ 81769 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASC15-MBOAT1 CASC15 chr6 22020542 + MBOAT1 chr6 20152769 - Exonic hg38 BLCA TCGA-FD-A3SJ-01A 4 40 5'UTR-CDS Intra-chr p22.3 p22.3 81770 ChimerSeq TCGA FAWG TCGA_RNA-Seq YIPF1-MRPL15 YIPF1 chr1 53883113 - MRPL15 chr8 54147382 + Exonic hg38 BLCA TCGA-FD-A3SJ-01A 6 25 Out-of-frame Inter-chr p32.3 q11.23 Seq+ 81771 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMIP-BCO1 CMIP chr16 81445541 + BCO1 chr16 81245475 + Exonic hg38 BLCA TCGA-FD-A3SJ-01A 5 25 Out-of-frame Intra-chr q23.2 q23.2 81772 ChimerSeq TCGA FAWG TCGA_RNA-Seq HERC4-CDKAL1 HERC4 chr10 68032778 - CDKAL1 chr6 21000227 + Exonic hg38 BLCA TCGA-FD-A3SJ-01A 4 19 In-Frame Inter-chr q21.3 p22.3 Seq+ 81773 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D9B-C5orf60 TBC1D9B chr5 179874902 - C5orf60 chr5 179641878 - Exonic hg38 BLCA TCGA-FD-A3SJ-01A 1 22 5'UTR-3'UTR Intra-chr q35.3 81774 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSC22D2-FGF12 TSC22D2 chr3 150411308 + FGF12 chr3 192170656 - Exonic hg38 BLCA TCGA-FD-A3SJ-01A 2 15 Out-of-frame Intra-chr q25.1 q29 Seq+ 81775 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1orf116-LIN9 C1orf116 chr1 207032579 - LIN9 chr1 226250919 - Exonic hg38 BLCA TCGA-FD-A3SJ-01A 1 14 5'UTR-CDS Intra-chr q32.1 q42.12 Tumor suppressor gene Seq+ 81776 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACOXL-UNC5D ACOXL chr2 111092966 + UNC5D chr8 35549292 + Exonic hg38 BLCA TCGA-FD-A3SJ-01A 3 5 Out-of-frame Inter-chr q13 p12 Tumor suppressor gene Seq+ 81777 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLA1-CXorf58 POLA1 chrX 24930549 + CXorf58 chrX 23910283 + Exonic hg38 BLCA TCGA-FD-A3SJ-01A 3 5 CDS-5'UTR Intra-chr p22.11 p22.11 Seq+ 81778 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF7-KLF10 ARHGEF7 chr13 111244294 + KLF10 chr8 102652397 - Exonic hg38 BLCA TCGA-FD-A3SJ-01A 2 8 In-Frame Inter-chr q34 q22.3 Tumor suppressor gene Transcription factor Seq+ 81779 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHCHD6-PLXNA1 CHCHD6 chr3 126704399 + PLXNA1 chr3 127029874 + Exonic hg38 BLCA TCGA-FD-A3SJ-01A 1 7 Out-of-frame Intra-chr q21.3 q21.3 81780 ChimerSeq TCGA FAWG TCGA_RNA-Seq KREMEN1-EMID1 KREMEN1 chr22 29098953 + EMID1 chr22 29233379 + Exonic hg38 BLCA TCGA-FD-A3SJ-01A 1 6 In-Frame Intra-chr q12.1 q12.2 81781 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB7A-KBTBD12 RAB7A chr3 128726359 + KBTBD12 chr3 127927764 + Exonic hg38 BLCA TCGA-FD-A3SJ-01A 1 4 5'UTR-CDS Intra-chr q21.3 Tumor suppressor gene q21.3 81782 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRF3-IFT172 ADGRF3 chr2 26345711 - IFT172 chr2 27465882 - Exonic hg38 BLCA TCGA-FD-A3SJ-01A 1 3 5'UTR-CDS Intra-chr p23.3 p23.3 81783 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM19A5-MAPK8IP2 FAM19A5 chr22 48646746 + MAPK8IP2 chr22 50610212 + Exonic hg38 BLCA TCGA-FD-A3SJ-01A 1 3 Out-of-frame Intra-chr q13.32 q13.33 81784 ChimerSeq TCGA FAWG TCGA_RNA-Seq NME7-TIPRL NME7 chr1 169323117 - TIPRL chr1 168183902 + Exonic hg38 BLCA TCGA-FD-A3SJ-01A 1 1 In-Frame Intra-chr q24.2 q24.2 81785 ChimerSeq TCGA FAWG TCGA_RNA-Seq IKZF3-MED24 IKZF3 chr17 39829387 - MED24 chr17 40019933 - Exonic hg38 BLCA TCGA-FD-A3SL-01A 13 30 In-Frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Seq+ 81786 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF638-C2orf78 ZNF638 chr2 71331865 + C2orf78 chr2 73813477 + Exonic hg38 BLCA TCGA-FD-A3SM-01A 5 20 5'UTR-CDS Intra-chr p13.3 p13.1 Seq+ 81787 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP45-CNN2 ARHGAP45 chr19 1078045 + CNN2 chr19 1036130 + Exonic hg38 BLCA TCGA-FD-A3SM-01A 1 9 In-Frame Intra-chr p13.3 p13.3 81788 ChimerSeq TCGA FAWG TCGA_RNA-Seq HID1-SUMO2 HID1 chr17 74972591 - SUMO2 chr17 75181188 - Exonic hg38 BLCA TCGA-FD-A3SN-01A 4 3 In-Frame Intra-chr q25.1 q25.1 Seq+ 81789 ChimerSeq TCGA FAWG TCGA_RNA-Seq TGFB1-FXYD5 TGFB1 chr19 41332128 - FXYD5 chr19 35164156 + Exonic hg38 BLCA TCGA-FD-A3SO-01A 14 40 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.12 Seq+ 81790 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOMM40-PDZRN4 TOMM40 chr19 44894066 + PDZRN4 chr12 41506456 + Exonic hg38 BLCA TCGA-FD-A3SO-01A 2 20 Out-of-frame Inter-chr q13.32 q12 Seq+ 81791 ChimerSeq TCGA FAWG TCGA_RNA-Seq CFH-CRB1 CFH chr1 196690239 + CRB1 chr1 197328422 + Exonic hg38 BLCA TCGA-FD-A3SP-01A 7 24 In-Frame Intra-chr q31.3 q31.3 Seq+ 81792 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL5-CCDC18 RPL5 chr1 92834913 + CCDC18 chr1 93192000 + Exonic hg38 BLCA TCGA-FD-A3SP-01A 2 37 In-Frame Intra-chr p22.1 Tumor suppressor gene p22.1 Seq+ 81793 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNY-ANK3 CCNY chr10 35337207 + ANK3 chr10 60114331 - Exonic hg38 BLCA TCGA-FD-A3SP-01A 2 6 Out-of-frame Intra-chr p11.21 q21.2 Seq+ 81794 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIP2C-GDI2 DIP2C chr10 440871 - GDI2 chr10 5800705 - Exonic hg38 BLCA TCGA-FD-A3SP-01A 2 5 Out-of-frame Intra-chr p15.3 p15.1 Seq+ 81795 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGSM2-EPN2 SGSM2 chr17 2343620 + EPN2 chr17 19309885 + Exonic hg38 BLCA TCGA-FD-A3SQ-01A 22 69 In-Frame Intra-chr p13.3 Transcription factor p11.2 Seq+ 81796 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAPGEF2-OCIAD2 RAPGEF2 chr4 159314768 + OCIAD2 chr4 48904611 - Exonic hg38 BLCA TCGA-FD-A3SR-01A 27 124 CDS-5'UTR Intra-chr q32.1 p11 Seq+ 81797 ChimerSeq TCGA FAWG TCGA_RNA-Seq INPP4A-MGAT4A INPP4A chr2 98533495 + MGAT4A chr2 98625835 - Exonic hg38 BLCA TCGA-FD-A3SR-01A 6 97 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 81798 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR2E-ZNF420 POLR2E chr19 1089472 - ZNF420 chr19 37127128 + Exonic hg38 BLCA TCGA-FD-A3SR-01A 8 34 3'UTR-CDS Intra-chr p13.3 q13.12 Transcription factor Seq+ 81799 ChimerSeq TCGA FAWG TCGA_RNA-Seq IKBKB-UNC5D IKBKB chr8 42272205 + UNC5D chr8 35549292 + Exonic hg38 BLCA TCGA-FD-A3SR-01A 8 31 Out-of-frame Intra-chr p11.21 Oncogene p12 Tumor suppressor gene Seq+ 81800 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF254-NANOS3 ZNF254 chr19 24046279 + NANOS3 chr19 13880442 + Exonic hg38 BLCA TCGA-FD-A3SR-01A 2 2 5'UTR-5'UTR Intra-chr p12 Transcription factor p13.12 81801 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCR-PPIL2 BCR chr22 23273774 + PPIL2 chr22 21693816 + Exonic hg38 BLCA TCGA-FD-A43N-01A 10 28 Out-of-frame Intra-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q11.21 Seq+ 81802 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBB-U91328.19 TUBB chr6 30723028 + U91328.19 chr6 25992847 + Exonic hg38 BLCA TCGA-FD-A43N-01A 3 44 Out-of-frame Intra-chr 81803 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA7-TRIM21 PLEKHA7 chr11 17013989 - TRIM21 chr11 4390458 - Exonic hg38 BLCA TCGA-FD-A43N-01A 5 13 CDS-5'UTR Intra-chr p15.1 p15.4 Seq+ 81804 ChimerSeq TCGA FAWG TCGA_RNA-Seq C6orf136-AKR1C1 C6orf136 chr6 30649959 + AKR1C1 chr10 4965914 + Exonic hg38 BLCA TCGA-FD-A43N-01A 2 12 3'UTR-3'UTR Inter-chr p21.33 p15.1 81805 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP98-DNHD1 NUP98 chr11 3753316 - DNHD1 chr11 6562982 + Exonic hg38 BLCA TCGA-FD-A43N-01A 2 5 Out-of-frame Intra-chr p15.4 Oncogene Tumor suppressor gene p15.4 Seq+ 81806 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD11-1 PSMD11 chr17 32447046 + 1 chr17 41047296 - Exonic hg38 BLCA TCGA-FD-A43P-01A 22 64 CDS-3'UTR Intra-chr q11.2 81807 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRK3-RHBDL3 GRK3 chr22 25565153 + RHBDL3 chr17 32284659 + Exonic hg38 BLCA TCGA-FD-A43P-01A 7 54 Out-of-frame Inter-chr q12.1 q11.2 81808 ChimerSeq TCGA FAWG TCGA_RNA-Seq C6orf203-PDSS2 C6orf203 chr6 107040230 + PDSS2 chr6 107154777 - Exonic hg38 BLCA TCGA-FD-A43P-01A 5 36 Out-of-frame Intra-chr q21 q21 Tumor suppressor gene Seq+ 81809 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMYND11-CDH18 ZMYND11 chr10 221356 + CDH18 chr5 20255505 - Exonic hg38 BLCA TCGA-FD-A43P-01A 3 15 5'UTR-5'UTR Inter-chr p15.3 Tumor suppressor gene p14.3 Seq+ 81810 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM189A1-GABRG3 FAM189A1 chr15 29196430 - GABRG3 chr15 27326809 + Exonic hg38 BLCA TCGA-FD-A43P-01A 2 14 5'UTR-CDS Intra-chr q12 Seq+ 81811 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLK2-THRA TLK2 chr17 62536337 + THRA chr17 40083835 + Exonic hg38 BLCA TCGA-FD-A43P-01A 4 4 In-Frame Intra-chr q23.2 Other:TLK q21.1 Tumor suppressor gene Transcription factor Seq+ 81812 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-ZMYND8 BCAS3 chr17 61084564 + ZMYND8 chr20 47262428 - Exonic hg38 BLCA TCGA-FD-A43P-01A 2 4 In-Frame Inter-chr q23.2 q13.12 Seq+ 81813 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM99-FBXO47 TMEM99 chr17 40833199 + FBXO47 chr17 38963051 - Exonic hg38 BLCA TCGA-FD-A43P-01A 1 4 5'UTR-5'UTR Intra-chr q21.2 q12 Seq+ 81814 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR4-RUNX1 WDR4 chr21 42850041 - RUNX1 chr21 35864467 - Exonic hg38 BLCA TCGA-FD-A43X-01A 1 3 3'UTR-5'UTR Intra-chr q22.3 q22.12 Oncogene Tumor suppressor gene Transcription factor 81815 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETBP1-NFYC SETBP1 chr18 44869283 + NFYC chr1 40738836 + Exonic hg38 BLCA TCGA-FD-A43Y-01A 3 27 CDS-5'UTR Inter-chr q12.3 Oncogene Transcription factor p34.2 Transcription factor Seq+ 81816 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNDC3B-EMP3 FNDC3B chr3 172251541 + EMP3 chr19 48329352 + Exonic hg38 BLCA TCGA-FD-A5BT-01A 7 126 In-Frame Inter-chr q26.31 q13.33 Seq+ 81817 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP1B1-NIPSNAP1 AP1B1 chr22 29349218 - NIPSNAP1 chr22 29558953 - Exonic hg38 BLCA TCGA-FD-A5BT-01A 1 7 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 81818 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCUBE2-LDHC SCUBE2 chr11 9069370 - LDHC chr11 18429737 + Exonic hg38 BLCA TCGA-FD-A5BV-01A 5 36 In-Frame Intra-chr p15.4 Tumor suppressor gene p15.1 Seq+ 81819 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFB9-NSMCE2 NDUFB9 chr8 124547113 + NSMCE2 chr8 125357219 + Exonic hg38 BLCA TCGA-FD-A5BV-01A 1 3 Out-of-frame Intra-chr q24.13 q24.13 81820 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPB1-SPON1 COPB1 chr11 14483032 - SPON1 chr11 14075345 + Exonic hg38 BLCA TCGA-FD-A5BV-01A 1 2 Out-of-frame Intra-chr p15.2 p15.2 81821 ChimerSeq TCGA FAWG TCGA_RNA-Seq APP-MMP9 APP chr21 25891722 - MMP9 chr20 46014371 + Exonic hg38 BLCA TCGA-FD-A5BX-01A 1 3 Out-of-frame Inter-chr q21.3 q13.12 81822 ChimerSeq TCGA FAWG TCGA_RNA-Seq REV1-LYG2 REV1 chr2 99462496 - LYG2 chr2 99246820 - Exonic hg38 BLCA TCGA-FD-A5BZ-01A 2 14 In-Frame Intra-chr q11.2 q11.2 Seq+ 81823 ChimerSeq TCGA FAWG TCGA_RNA-Seq REV1-LYG1 REV1 chr2 99462496 - LYG1 chr2 99284820 - Exonic hg38 BLCA TCGA-FD-A5BZ-01A 2 10 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 81824 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIP2A-C16orf46 DIP2A chr21 46484828 + C16orf46 chr16 81054094 - Exonic hg38 BLCA TCGA-FD-A5C0-01A 44 216 Out-of-frame Inter-chr q22.3 q23.2 Seq+ 81825 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIPA-TMEM132A LIPA chr10 89245676 - TMEM132A chr11 60927204 + Exonic hg38 BLCA TCGA-FD-A62N-01A 2 22 In-Frame Inter-chr q23.31 q12.2 Seq+ 81826 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAG4-WRN BAG4 chr8 38192795 + WRN chr8 31154624 + Exonic hg38 BLCA TCGA-FD-A62O-01A 11 66 In-Frame Intra-chr p11.23 p12 Oncogene Seq+ 81827 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGCS1-UNC13A HMGCS1 chr5 43292848 - UNC13A chr19 17646111 - Exonic hg38 BLCA TCGA-FD-A62P-01A 3 20 In-Frame Inter-chr p12 p13.11 Seq+ 81828 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP6AP1-OPN1LW ATP6AP1 chrX 154429174 + OPN1LW chrX 154156294 + Exonic hg38 BLCA TCGA-FD-A62P-01A 2 16 In-Frame Intra-chr q28 q28 Seq+ 81829 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSP90AB1-MRPL14 HSP90AB1 chr6 44247195 + MRPL14 chr6 44116629 - Exonic hg38 BLCA TCGA-FD-A62P-01A 2 6 5'UTR-5'UTR Intra-chr p21.1 Oncogene p21.1 Seq+ 81830 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6R3-CSN1S2AP PPP6R3 chr11 68460827 + CSN1S2AP chr4 70078754 + Exonic hg38 BLCA TCGA-FD-A62S-01A 25 73 5'UTR-3'UTR Inter-chr q13.2 Seq+ 81831 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMPSTE24-SMAP2 ZMPSTE24 chr1 40272035 + SMAP2 chr1 40406736 + Exonic hg38 BLCA TCGA-FD-A62S-01A 7 35 In-Frame Intra-chr p34.2 p34.2 Seq+ 81832 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB30-DPP3 RAB30 chr11 83071691 - DPP3 chr11 66504612 + Exonic hg38 BLCA TCGA-FD-A62S-01A 3 20 5'UTR-CDS Intra-chr q14.1 q13.2 Seq+ 81833 ChimerSeq TCGA FAWG TCGA_RNA-Seq TENM4-DPP3 TENM4 chr11 79440509 - DPP3 chr11 66509079 + Exonic hg38 BLCA TCGA-FD-A62S-01A 1 6 5'UTR-CDS Intra-chr q14.1 q13.2 81834 ChimerSeq TCGA FAWG TCGA_RNA-Seq COBLL1-SCN3A COBLL1 chr2 164841156 - SCN3A chr2 165170548 - Exonic hg38 BLCA TCGA-FD-A6TA-01A 7 24 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 81835 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD9-1 CHD9 chr16 53055077 + 1 chr19 58306088 + Exonic hg38 BLCA TCGA-FD-A6TA-01A 7 10 5'UTR-CDS Inter-chr q12.2 81836 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAS2L3-MED13L GAS2L3 chr12 100601753 + MED13L chr12 115966243 - Exonic hg38 BLCA TCGA-FD-A6TB-01A 5 35 In-Frame Intra-chr q23.1 q24.21 Seq+ 81837 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC9-NUP62 CCDC9 chr19 47266792 + NUP62 chr19 49909884 - Exonic hg38 BLCA TCGA-FD-A6TC-01A 14 38 CDS-5'UTR Intra-chr q13.32 q13.33 Seq+ 81838 ChimerSeq TCGA FAWG TCGA_RNA-Seq CES2-SLC9A5 CES2 chr16 66934884 + SLC9A5 chr16 67270784 + Exonic hg38 BLCA TCGA-FD-A6TC-01A 6 22 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 81839 ChimerSeq TCGA FAWG TCGA_RNA-Seq CES2-PLEKHG4 CES2 chr16 66934621 + PLEKHG4 chr16 67277594 + Exonic hg38 BLCA TCGA-FD-A6TC-01A 5 18 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 81840 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC42BPA-WWOX CDC42BPA chr1 227317005 - WWOX chr16 79211608 + Exonic hg38 BLCA TCGA-FD-A6TC-01A 6 6 Out-of-frame Inter-chr q42.13 q23.1 Tumor suppressor gene Seq+ 81841 ChimerSeq TCGA FAWG TCGA_RNA-Seq OVOL2-CBLN4 OVOL2 chr20 18041534 - CBLN4 chr20 55998754 - Exonic hg38 BLCA TCGA-FD-A6TC-01A 1 10 Out-of-frame Intra-chr p11.23 Transcription factor q13.2 Seq+ 81842 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO2-BICD1 ANO2 chr12 5921040 - BICD1 chr12 32293994 + Exonic hg38 BLCA TCGA-FD-A6TC-01A 3 1 In-Frame Intra-chr p13.31 p11.21 Seq+ 81843 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAF7-MAPK8IP3 TRAF7 chr16 2164001 + MAPK8IP3 chr16 1766904 + Exonic hg38 BLCA TCGA-FD-A6TD-01A 38 51 Out-of-frame Intra-chr p13.3 Oncogene p13.3 Seq+ 81844 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE3B-MICAL2 PDE3B chr11 14645053 + MICAL2 chr11 12162079 + Exonic hg38 BLCA TCGA-FD-A6TD-01A 1 5 CDS-5'UTR Intra-chr p15.2 p15.3 Seq+ 81845 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICAL2-RRAS2 MICAL2 chr11 12239585 + RRAS2 chr11 14295855 - Exonic hg38 BLCA TCGA-FD-A6TD-01A 1 4 In-Frame Intra-chr p15.3 p15.2 81846 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAK-SPON2 GAK chr4 859606 - SPON2 chr4 1179541 - Exonic hg38 BLCA TCGA-FD-A6TE-01A 4 16 CDS-5'UTR Intra-chr p16.3 Other:NAK p16.3 Seq+ 81847 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC20-KCNK1 ZDHHC20 chr13 21391722 - KCNK1 chr1 233666595 + Exonic hg38 BLCA TCGA-FD-A6TF-01A 1 1 In-Frame Inter-chr q12.11 q42.2 81848 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLK2-IRAK3 TLK2 chr17 62602180 + IRAK3 chr12 66226723 + Exonic hg38 BLCA TCGA-FD-A6TG-01A 21 33 In-Frame Inter-chr q23.2 Other:TLK q14.3 TKL:IRAK Seq+ 81849 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPINT2-GRIP1 SPINT2 chr19 38290575 + GRIP1 chr12 66541950 - Exonic hg38 BLCA TCGA-FD-A6TG-01A 6 62 In-Frame Inter-chr q13.2 Tumor suppressor gene q14.3 Seq+ 81850 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNHIT3-WDR60 ZNHIT3 chr17 36486966 + WDR60 chr7 158922377 + Exonic hg38 BLCA TCGA-FD-A6TG-01A 8 47 3'UTR-CDS Inter-chr q12 q36.3 Seq+ 81851 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLG1-MYO9B DLG1 chr3 197194425 - MYO9B chr19 17191097 + Exonic hg38 BLCA TCGA-FD-A6TG-01A 7 25 In-Frame Inter-chr q29 Tumor suppressor gene p13.11 Seq+ 81852 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL9-AGBL4 OSBPL9 chr1 51652041 + AGBL4 chr1 48590985 - Exonic hg38 BLCA TCGA-FD-A6TG-01A 5 21 In-Frame Intra-chr p32.3 p33 Seq+ 81853 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF148-RPRD2 ZNF148 chr3 125331158 - RPRD2 chr1 150457288 + Exonic hg38 BLCA TCGA-FD-A6TG-01A 6 14 5'UTR-CDS Inter-chr q21.2 Transcription factor q21.2 Seq+ 81854 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD28-GRM7 ANKRD28 chr3 15859377 - GRM7 chr3 7740357 + Exonic hg38 BLCA TCGA-FD-A6TG-01A 4 20 Out-of-frame Intra-chr p25.1 p26.1 Seq+ 81855 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICE-FARS2 MICE chr6 29748900 - FARS2 chr6 5545180 + Exonic hg38 BLCA TCGA-FD-A6TG-01A 4 18 Out-of-frame Intra-chr p22.1 p25.1 81856 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARPC3-TYROBP ARPC3 chr12 110450255 - TYROBP chr19 35907580 - Exonic hg38 BLCA TCGA-FD-A6TG-01A 1 26 Out-of-frame Inter-chr q24.11 q13.12 81857 ChimerSeq TCGA FAWG TCGA_RNA-Seq NQO1-SEC31A NQO1 chr16 69726433 - SEC31A chr4 82900223 - Exonic hg38 BLCA TCGA-FD-A6TG-01A 3 15 CDS-5'UTR Inter-chr q22.1 q21.22 81858 ChimerSeq TCGA FAWG TCGA_RNA-Seq FKRP-XPOT FKRP chr19 46748088 + XPOT chr12 64416698 + Exonic hg38 BLCA TCGA-FD-A6TG-01A 2 3 5'UTR-CDS Inter-chr q13.32 q14.2 Seq+ 81859 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX13-GLCCI1 SNX13 chr7 17940284 - GLCCI1 chr7 8003908 + Exonic hg38 BLCA TCGA-FD-A6TG-01A 2 3 Out-of-frame Intra-chr p21.1 p21.3 Seq+ 81860 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPP-RNF168 LPP chr3 188609844 + RNF168 chr3 196475312 - Exonic hg38 BLCA TCGA-FD-A6TG-01A 1 3 Out-of-frame Intra-chr q27.3 Oncogene q29 81861 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD3-ABR STARD3 chr17 39637231 + ABR chr17 1070090 - Exonic hg38 BLCA TCGA-FD-A6TH-01A 4 11 5'UTR-5'UTR Intra-chr q12 p13.3 Seq+ 81862 ChimerSeq TCGA FAWG TCGA_RNA-Seq METRNL-DYNLL2 METRNL chr17 83085323 + DYNLL2 chr17 58087082 + Exonic hg38 BLCA TCGA-FD-A6TH-01A 2 10 5'UTR-5'UTR Intra-chr q22 Seq+ 81863 ChimerSeq TCGA FAWG TCGA_RNA-Seq LLGL2-AP2B1 LLGL2 chr17 75573631 + AP2B1 chr17 35709224 + Exonic hg38 BLCA TCGA-FD-A6TH-01A 2 9 Out-of-frame Intra-chr q25.1 q12 Seq+ 81864 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1B-SMOC2 ARID1B chr6 156829421 + SMOC2 chr6 168650681 + Exonic hg38 BLCA TCGA-FD-A6TI-01A 1 9 Out-of-frame Intra-chr q25.3 Oncogene q27 Seq+ 81865 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPM3-NTRK1 TPM3 chr1 154170400 - NTRK1 chr1 156874571 + Exonic hg38 BLCA TCGA-FD-A6TI-01A 1 1 In-Frame Intra-chr q21.3 q23.1 Oncogene KB Pub Seq+ 81866 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIRLET7BHG-HKDC1 MIRLET7BHG chr22 46098558 + HKDC1 chr10 69265585 + Exonic hg38 BLCA TCGA-FD-A6TK-01A 6 44 5'UTR-CDS Inter-chr q13.31 q22.1 Seq+ 81867 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFT1-NEK4 RFT1 chr3 53130338 - NEK4 chr3 52741499 - Exonic hg38 BLCA TCGA-FD-A6TK-01A 1 12 In-Frame Intra-chr p21.1 p21.1 Other:NEK 81868 ChimerSeq TCGA FAWG TCGA_RNA-Seq RELB-PPP1R37 RELB chr19 45002996 + PPP1R37 chr19 45138514 + Exonic hg38 BLCA TCGA-FD-A6TK-01A 1 7 Out-of-frame Intra-chr q13.32 Transcription factor q13.32 81869 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTERF3-FNTA MTERF3 chr8 96256962 - FNTA chr8 43077216 + Exonic hg38 BLCA TCGA-FD-A6TK-01A 1 2 Out-of-frame Intra-chr q22.1 Transcription factor p11.21 81870 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAPPA2-RPS19 PAPPA2 chr1 176671115 + RPS19 chr19 41869031 + Exonic hg38 BLCA TCGA-FJ-A3Z7-01A 12 58 In-Frame Inter-chr q25.2 q13.2 Seq+ 81871 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR611-SCGB1D2 MIR611 chr11 61792556 - SCGB1D2 chr11 62243289 + Exonic hg38 BLCA TCGA-FJ-A3Z7-01A 8 7 3'UTR-CDS Intra-chr q12.2 q12.3 Seq+ 81872 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRSF4-CREB5 SRSF4 chr1 29181646 - CREB5 chr7 28804199 + Exonic hg38 BLCA TCGA-FJ-A3Z7-01A 5 19 Out-of-frame Inter-chr p35.3 p15.1 Transcription factor Seq+ 81873 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM258-SCGB1D2 TMEM258 chr11 61792556 - SCGB1D2 chr11 62243289 + Exonic hg38 BLCA TCGA-FJ-A3Z7-01A 8 7 Out-of-frame Intra-chr q12.2 q12.3 Seq+ 81874 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPBL-SPEF2 NIPBL chr5 36877178 + SPEF2 chr5 35659019 + Exonic hg38 BLCA TCGA-FJ-A3Z7-01A 1 4 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 81875 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC6B-TPST2 TNRC6B chr22 40251200 + TPST2 chr22 26544675 - Exonic hg38 BLCA TCGA-FJ-A3Z7-01A 1 3 Out-of-frame Intra-chr q13.1 q12.1 Seq+ 81876 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACACA-HTRA4 ACACA chr17 37330173 - HTRA4 chr8 38987936 + Exonic hg38 BLCA TCGA-FJ-A3ZE-01A 81 248 5'UTR-CDS Inter-chr p11.22 Seq+ 81877 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIB1-CABYR MIB1 chr18 21804014 + CABYR chr18 24155701 + Exonic hg38 BLCA TCGA-FJ-A3ZE-01A 14 29 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 81878 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACACA-ADAM9 ACACA chr17 37330173 - ADAM9 chr8 39007886 + Exonic hg38 BLCA TCGA-FJ-A3ZE-01A 2 9 5'UTR-3'UTR Inter-chr Seq+ 81879 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM63A-FCGR2A TMEM63A chr1 225871987 - FCGR2A chr1 161517975 + Exonic hg38 BLCA TCGA-FJ-A3ZE-01A 2 4 In-Frame Intra-chr q42.12 q23.3 Seq+ 81880 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR1D-SMYD2 POLR1D chr13 27648453 + SMYD2 chr1 214336704 + Exonic hg38 BLCA TCGA-FJ-A3ZE-01A 2 2 Out-of-frame Inter-chr q12.2 q32.3 Seq+ 81881 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNMT1-ADGRE1 DNMT1 chr19 10155853 - ADGRE1 chr19 6890481 + Exonic hg38 BLCA TCGA-FJ-A3ZE-01A 1 4 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene Transcription factor p13.3 81882 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNC13D-ACOX1 UNC13D chr17 75835409 - ACOX1 chr17 75943213 - Exonic hg38 BLCA TCGA-FJ-A3ZF-01A 14 84 CDS-3'UTR Intra-chr q25.1 q25.1 Seq+ 81883 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF613-SIGLEC7 ZNF613 chr19 51929896 + SIGLEC7 chr19 51153063 + Exonic hg38 BLCA TCGA-FJ-A3ZF-01A 7 36 5'UTR-5'UTR Intra-chr q13.41 Transcription factor q13.41 Seq+ 81884 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSTD1-GBAP1 TSTD1 chr1 161038880 - GBAP1 chr1 155217373 - Exonic hg38 BLCA TCGA-FJ-A3ZF-01A 4 21 CDS-5'UTR Intra-chr q23.3 q22 Seq+ 81885 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBGCP4-TMEM62 TUBGCP4 chr15 43386330 + TMEM62 chr15 43160681 + Exonic hg38 BLCA TCGA-FJ-A3ZF-01A 5 10 In-Frame Intra-chr q15.3 q15.2 Seq+ 81886 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNIP1-IL5 FNIP1 chr5 131796830 - IL5 chr5 132543126 - Exonic hg38 BLCA TCGA-FJ-A3ZF-01A 1 6 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 81887 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTAP-LINGO2 MTAP chr9 21838010 + LINGO2 chr9 28080978 - Exonic hg38 BLCA TCGA-FJ-A871-01A 25 117 CDS-5'UTR Intra-chr p21.3 Tumor suppressor gene p21.1 Seq+ 81888 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB11FIP1-KCNU1 RAB11FIP1 chr8 37899071 - KCNU1 chr8 36905708 + Exonic hg38 BLCA TCGA-FT-A3EE-01A 28 108 In-Frame Intra-chr p11.23 p11.23 Seq+ 81889 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRA2-GSR ADGRA2 chr8 37834128 + GSR chr8 30712088 - Exonic hg38 BLCA TCGA-FT-A3EE-01A 6 39 In-Frame Intra-chr p11.23 Oncogene p12 81890 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF276-SPG7 ZNF276 chr16 89739295 + SPG7 chr16 89546658 + Exonic hg38 BLCA TCGA-G2-A2EC-01A 5 11 5'UTR-CDS Intra-chr q24.3 Transcription factor q24.3 Seq+ 81891 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAP3-DDX1 LAP3 chr4 17581814 + DDX1 chr2 15606150 + Exonic hg38 BLCA TCGA-G2-A2EF-01A 163 314 In-Frame Inter-chr p15.32 p24.3 Seq+ 81892 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC24C-ADK SEC24C chr10 73744437 + ADK chr10 74670183 + Exonic hg38 BLCA TCGA-G2-A2EF-01A 120 113 5'UTR-5'UTR Intra-chr q22.2 q22.2 Seq+ 81893 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK6-HEPACAM2 CDK6 chr7 92774696 - HEPACAM2 chr7 93192363 - Exonic hg38 BLCA TCGA-G2-A2EF-01A 45 185 In-Frame Intra-chr q21.2 CMGC:CDK Oncogene Tumor suppressor gene q21.2 Seq+ 81894 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPRED2-RAB1A SPRED2 chr2 65431962 - RAB1A chr2 65104806 - Exonic hg38 BLCA TCGA-G2-A2EF-01A 21 46 In-Frame Intra-chr p14 p14 Seq+ 81895 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALG5-WBSCR17 ALG5 chr13 36985627 - WBSCR17 chr7 71710761 + Exonic hg38 BLCA TCGA-G2-A2EF-01A 11 64 Out-of-frame Inter-chr q13.3 q11.22 Seq+ 81896 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D20-C20orf96 TBC1D20 chr20 462336 - C20orf96 chr20 289676 - Exonic hg38 BLCA TCGA-G2-A2EF-01A 10 43 Out-of-frame Intra-chr p13 p13 Seq+ 81897 ChimerSeq TCGA FAWG TCGA_RNA-Seq DALRD3-PRKAR2A DALRD3 chr3 49016774 - PRKAR2A chr3 48752317 - Exonic hg38 BLCA TCGA-G2-A2EF-01A 4 12 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 81898 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXNL1-LRP1B TXNL1 chr18 56638343 - LRP1B chr2 140541971 - Exonic hg38 BLCA TCGA-G2-A2EF-01A 4 6 Out-of-frame Inter-chr q21.31 q22.2 Oncogene Tumor suppressor gene Seq+ 81899 ChimerSeq TCGA FAWG TCGA_RNA-Seq GIGYF2-MROH2A GIGYF2 chr2 232735238 + MROH2A chr2 233810794 + Exonic hg38 BLCA TCGA-G2-A2EL-01A 6 21 Out-of-frame Intra-chr q37.1 q37.1 81900 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR74-SNHG1 WDR74 chr11 62835431 - SNHG1 chr11 62852839 - Exonic hg38 BLCA TCGA-G2-A2EO-01A 35 128 3'UTR-3'UTR Intra-chr q12.3 q12.3 Seq+ 81901 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASAP1-MRPL13 ASAP1 chr8 130214556 - MRPL13 chr8 120381174 - Exonic hg38 BLCA TCGA-G2-A2EO-01A 20 116 CDS-3'UTR Intra-chr q24.22 q24.12 81902 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXT1-WDYHV1 EXT1 chr8 118110085 - WDYHV1 chr8 123427924 + Exonic hg38 BLCA TCGA-G2-A2EO-01A 15 32 In-Frame Intra-chr q24.11 Oncogene Tumor suppressor gene q24.13 Seq+ 81903 ChimerSeq TCGA FAWG TCGA_RNA-Seq LCLAT1-MYADML LCLAT1 chr2 30447383 + MYADML chr2 33723513 - Exonic hg38 BLCA TCGA-G2-A2EO-01A 2 16 5'UTR-3'UTR Intra-chr p23.1 p22.3 81904 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD44-CREBZF CD44 chr11 35190065 + CREBZF chr11 85660597 - Exonic hg38 BLCA TCGA-G2-A2EO-01A 2 1 CDS-3'UTR Intra-chr p13 Oncogene Tumor suppressor gene q14.1 Transcription factor Seq+ 81905 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOL12-LGALS1 NOL12 chr22 37688992 + LGALS1 chr22 37676986 + Exonic hg38 BLCA TCGA-G2-A2ES-01A 201 783 In-Frame Intra-chr q13.1 q13.1 Seq+ 81906 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41-GMEB1 EPB41 chr1 28887210 + GMEB1 chr1 28690104 + Exonic hg38 BLCA TCGA-G2-A2ES-01A 1 11 5'UTR-CDS Intra-chr p35.3 Tumor suppressor gene p35.3 Transcription factor 81907 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMAS-GAS5 CMAS chr12 22062434 + GAS5 chr1 173864304 - Exonic hg38 BLCA TCGA-G2-A3IB-01A 4 24 CDS-3'UTR Inter-chr p12.1 q25.1 Tumor suppressor gene Seq+ 81908 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSL1-STIP1 NSL1 chr1 212791530 - STIP1 chr11 64193078 + Exonic hg38 BLCA TCGA-G2-A3IB-01A 1 8 In-Frame Inter-chr q32.3 q13.1 81909 ChimerSeq TCGA FAWG TCGA_RNA-Seq STIP1-NSL1 STIP1 chr11 64186270 + NSL1 chr1 212784493 - Exonic hg38 BLCA TCGA-G2-A3IB-01A 2 4 Out-of-frame Inter-chr q13.1 q32.3 Seq+ 81910 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL42-MRPS35 KLHL42 chr12 27781202 + MRPS35 chr12 27755181 + Exonic hg38 BLCA TCGA-G2-A3IE-01A 14 49 Out-of-frame Intra-chr p11.22 p11.22 Seq+ 81911 ChimerSeq TCGA FAWG TCGA_RNA-Seq WARS2-OXR1 WARS2 chr1 119140555 - OXR1 chr8 106359476 + Exonic hg38 BLCA TCGA-G2-A3IE-01A 4 1 CDS-5'UTR Inter-chr p12 q23.1 Seq+ 81912 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC14-HADHB CCDC14 chr3 123933673 - HADHB chr2 26279994 + Exonic hg38 BLCA TCGA-G2-A3IE-01A 2 1 In-Frame Inter-chr q21.1 p23.3 Seq+ 81913 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID4B-NTPCR ARID4B chr1 235246420 - NTPCR chr1 232978163 + Exonic hg38 BLCA TCGA-G2-A3VY-01A 13 89 Out-of-frame Intra-chr q42.3 q42.2 Seq+ 81914 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCHLAP1-SLC51B SCHLAP1 chr2 180724690 + SLC51B chr15 65049897 + Exonic hg38 BLCA TCGA-G2-A3VY-01A 10 54 5'UTR-5'UTR Inter-chr q31.3 q22.31 81915 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR70-CACNA2D4 WDR70 chr5 37516590 + CACNA2D4 chr12 1909965 - Exonic hg38 BLCA TCGA-G2-A3VY-01A 3 16 CDS-5'UTR Inter-chr p13.2 p13.33 Seq+ 81916 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP133-CDH6 NUP133 chr1 229489955 - CDH6 chr5 31299464 + Exonic hg38 BLCA TCGA-G2-A3VY-01A 3 13 Out-of-frame Inter-chr q42.13 p13.3 Seq+ 81917 ChimerSeq TCGA FAWG TCGA_RNA-Seq UCK2-DARS2 UCK2 chr1 165827932 + DARS2 chr1 173826687 + Exonic hg38 BLCA TCGA-G2-A3VY-01A 4 7 Out-of-frame Intra-chr q24.1 q25.1 Seq+ 81918 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDSUB1-GPD2 WDSUB1 chr2 159248372 - GPD2 chr2 156476098 + Exonic hg38 BLCA TCGA-G2-A3VY-01A 2 10 CDS-5'UTR Intra-chr q24.2 q24.1 Seq+ 81919 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAD-MACROD1 BAD chr11 64284182 - MACROD1 chr11 64152393 - Exonic hg38 BLCA TCGA-G2-A3VY-01A 2 2 In-Frame Intra-chr q13.1 q13.1 Seq+ 81920 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPZL1-RCSD1 MPZL1 chr1 167722242 + RCSD1 chr1 167704664 + Exonic hg38 BLCA TCGA-G2-A3VY-01A 1 5 Out-of-frame Intra-chr q24.2 q24.2 81921 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF844-CMSS1 ZNF844 chr19 12074157 + CMSS1 chr3 100146973 + Exonic hg38 BLCA TCGA-G2-A3VY-01A 1 5 In-Frame Inter-chr p13.2 Transcription factor q12.1 Seq+ 81922 ChimerSeq TCGA FAWG TCGA_RNA-Seq E2F8-CSRP3 E2F8 chr11 19240107 - CSRP3 chr11 19202039 - Exonic hg38 BLCA TCGA-G2-A3VY-01A 1000 1000 CDS-5'UTR Intra-chr p15.1 Transcription factor p15.1 81923 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKRN2-FANCD2P2 MKRN2 chr3 12575006 + FANCD2P2 chr3 11881588 + Exonic hg38 BLCA TCGA-G2-AA3B-01A 5 39 Out-of-frame Intra-chr p25.2 p25.2 Seq+ 81924 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMAT5-ASCC2 ZMAT5 chr22 29766949 - ASCC2 chr22 29793676 - Exonic hg38 BLCA TCGA-G2-AA3B-01A 4 15 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 81925 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPNE1-ASIP CPNE1 chr20 35626221 - ASIP chr20 34260367 + Exonic hg38 BLCA TCGA-G2-AA3B-01A 3 15 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 81926 ChimerSeq TCGA FAWG TCGA_RNA-Seq FLNB-RHBDF1 FLNB chr3 58008856 + RHBDF1 chr16 65039 - Exonic hg38 BLCA TCGA-G2-AA3B-01A 2 15 CDS-5'UTR Inter-chr p14.3 p13.3 Seq+ 81927 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRDE2-CATSPERB NRDE2 chr14 90331841 - CATSPERB chr14 91625007 - Exonic hg38 BLCA TCGA-G2-AA3B-01A 3 9 CDS-5'UTR Intra-chr q32.11 Seq+ 81928 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESCO1-CPNE1 ESCO1 chr18 21600623 - CPNE1 chr20 35632923 - Exonic hg38 BLCA TCGA-G2-AA3B-01A 3 6 5'UTR-5'UTR Inter-chr q11.2 q11.22 Seq+ 81929 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC1-MARCH7 TANC1 chr2 159097834 + 2019_ 3_ 7_ chr2 159759226 + Exonic hg38 BLCA TCGA-G2-AA3B-01A 2 3 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 81930 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLEU2-MED4 DLEU2 chr13 50125302 - MED4 chr13 48090418 - Exonic hg38 BLCA TCGA-G2-AA3D-01A 6 19 3'UTR-CDS Intra-chr q14.2 Tumor suppressor gene q14.2 Seq+ 81931 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDC80-PPP4R1 NDC80 chr18 2579029 + PPP4R1 chr18 9562075 - Exonic hg38 BLCA TCGA-G2-AA3D-01A 5 22 In-Frame Intra-chr p11.32 p11.22 Seq+ 81932 ChimerSeq TCGA FAWG TCGA_RNA-Seq H6PD-CA6 H6PD chr1 9247083 + CA6 chr1 8967659 + Exonic hg38 BLCA TCGA-G2-AA3D-01A 3 10 In-Frame Intra-chr p36.22 p36.23 Seq+ 81933 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNL2-MRPL20 CCNL2 chr1 1398233 - MRPL20 chr1 1402256 - Exonic hg38 BLCA TCGA-G2-AA3D-01A 3 9 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 81934 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLMN-WDR20 CLMN chr14 95319711 - WDR20 chr14 102222830 + Exonic hg38 BLCA TCGA-G2-AA3D-01A 2 6 Out-of-frame Intra-chr q32.13 q32.31 Seq+ 81935 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDXDC2P-CDC42BPG PDXDC2P chr16 70010751 - CDC42BPG chr11 64832959 - Exonic hg38 BLCA TCGA-G2-AA3D-01A 1 8 Out-of-frame Inter-chr q22.1 q13.1 81936 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIN3A-OCA2 SIN3A chr15 75451423 - OCA2 chr15 27966822 - Exonic hg38 BLCA TCGA-G2-AA3D-01A 1 6 5'UTR-5'UTR Intra-chr q24.2 q13.1 Seq+ 81937 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLC3-CLPTM1 KLC3 chr19 45350747 + CLPTM1 chr19 44973087 + Exonic hg38 BLCA TCGA-G2-AA3D-01A 1 5 In-Frame Intra-chr q13.32 q13.32 Seq+ 81938 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACOXL-KLHL23 ACOXL chr2 110768464 + KLHL23 chr2 169741385 + Exonic hg38 BLCA TCGA-G2-AA3F-01A 37 170 Out-of-frame Intra-chr q13 q31.1 Seq+ 81939 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLGA4-RRM1 GOLGA4 chr3 37251484 + RRM1 chr11 4129074 + Exonic hg38 BLCA TCGA-G2-AA3F-01A 23 63 In-Frame Inter-chr p22.2 p15.4 Oncogene Seq+ 81940 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARRES1-RSRC1 RARRES1 chr3 158713797 - RSRC1 chr3 158354857 + Exonic hg38 BLCA TCGA-G2-AA3F-01A 3 98 In-Frame Intra-chr q25.32 q25.32 Seq+ 81941 ChimerSeq TCGA FAWG TCGA_RNA-Seq UXS1-C2orf40 UXS1 chr2 106129674 - C2orf40 chr2 106071844 + Exonic hg38 BLCA TCGA-G2-AA3F-01A 10 56 Out-of-frame Intra-chr q12.2 q12.2 Tumor suppressor gene Seq+ 81942 ChimerSeq TCGA FAWG TCGA_RNA-Seq DMXL1-ARHGAP15 DMXL1 chr5 119071656 + ARHGAP15 chr2 143435601 + Exonic hg38 BLCA TCGA-G2-AA3F-01A 5 32 In-Frame Inter-chr q23.1 q22.2 Seq+ 81943 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKP2-MAP3K20 PKP2 chr12 32868927 - MAP3K20 chr2 173203796 + Exonic hg38 BLCA TCGA-G2-AA3F-01A 4 6 In-Frame Inter-chr p11.21 q31.1 81944 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIMS1-CIAO1 LIMS1 chr2 108534594 + CIAO1 chr2 96267321 + Exonic hg38 BLCA TCGA-G2-AA3F-01A 1 14 Out-of-frame Intra-chr q12.3 q11.2 81945 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACOXL-SSB ACOXL chr2 110732774 + SSB chr2 169800952 + Exonic hg38 BLCA TCGA-G2-AA3F-01A 1 12 5'UTR-5'UTR Intra-chr q13 q31.1 81946 ChimerSeq TCGA FAWG TCGA_RNA-Seq GFM1-TMCC1 GFM1 chr3 158682157 + TMCC1 chr3 129671264 - Exonic hg38 BLCA TCGA-G2-AA3F-01A 1 3 In-Frame Intra-chr q25.32 q22.1 81947 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC5L-TMEM63B CDC5L chr6 44408632 + TMEM63B chr6 44134561 + Exonic hg38 BLCA TCGA-GC-A3RB-01A 19 58 3'UTR-5'UTR Intra-chr p21.1 Transcription factor p21.1 Seq+ 81948 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL2-CDH4 OSBPL2 chr20 62238597 + CDH4 chr20 61910422 + Exonic hg38 BLCA TCGA-GC-A3RB-01A 21 15 5'UTR-3'UTR Intra-chr q13.33 q13.33 Tumor suppressor gene Seq+ 81949 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTGES2-MLXIP PTGES2 chr9 128122362 - MLXIP chr12 122141691 + Exonic hg38 BLCA TCGA-GC-A3RB-01A 12 41 CDS-3'UTR Inter-chr q34.11 Transcription factor Seq+ 81950 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR37-TUBAL3 WDR37 chr10 1086357 + TUBAL3 chr10 5401087 - Exonic hg38 BLCA TCGA-GC-A3RB-01A 5 42 Out-of-frame Intra-chr p15.3 p15.1 Seq+ 81951 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCCA-CLYBL PCCA chr13 100268783 + CLYBL chr13 99891318 + Exonic hg38 BLCA TCGA-GC-A3RB-01A 8 17 Out-of-frame Intra-chr q32.3 q32.3 Seq+ 81952 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP4F3-IT1 CYP4F3 chr19 15641613 + IT1 chr21 38006826 - Exonic hg38 BLCA TCGA-GC-A3RB-01A 3 11 Out-of-frame Inter-chr p13.12 81953 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDK1-SLC29A4 SDK1 chr7 4178586 + SLC29A4 chr7 5302797 + Exonic hg38 BLCA TCGA-GC-A3RB-01A 2 14 In-Frame Intra-chr p22.2 p22.1 Seq+ 81954 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP12-E2F3 USP12 chr13 27089883 - E2F3 chr6 20479846 + Exonic hg38 BLCA TCGA-GC-A3RB-01A 4 5 Out-of-frame Inter-chr q12.13 Tumor suppressor gene p22.3 Tumor suppressor gene Transcription factor Seq+ 81955 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAD5-PTP4A1 ATAD5 chr17 30860612 + PTP4A1 chr6 63576436 + Exonic hg38 BLCA TCGA-GC-A3RB-01A 2 10 CDS-5'UTR Inter-chr q11.2 q12 Seq+ 81956 ChimerSeq TCGA FAWG TCGA_RNA-Seq MMP15-CDH5 MMP15 chr16 58026512 + CDH5 chr16 66379319 + Exonic hg38 BLCA TCGA-GC-A3RB-01A 3 5 CDS-5'UTR Intra-chr q21 q21 Oncogene Tumor suppressor gene Seq+ 81957 ChimerSeq TCGA FAWG TCGA_RNA-Seq L3MBTL3-WDR37 L3MBTL3 chr6 130022305 + WDR37 chr10 1072116 + Exonic hg38 BLCA TCGA-GC-A3RB-01A 1 4 5'UTR-5'UTR Inter-chr q23.1 Transcription factor p15.3 Seq+ 81958 ChimerSeq TCGA FAWG TCGA_RNA-Seq QSER1-PRRG4 QSER1 chr11 32893334 + PRRG4 chr11 32853296 + Exonic hg38 BLCA TCGA-GC-A3RB-01A 1 4 In-Frame Intra-chr p13 p13 Seq+ 81959 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHRS12-RASL11A DHRS12 chr13 51799534 - RASL11A chr13 27271484 + Exonic hg38 BLCA TCGA-GC-A3RC-01A 15 24 In-Frame Intra-chr q14.3 q12.2 Tumor suppressor gene Seq+ 81960 ChimerSeq TCGA FAWG TCGA_RNA-Seq QRICH1-PRKAR2A QRICH1 chr3 49044390 - PRKAR2A chr3 48807684 - Exonic hg38 BLCA TCGA-GC-A3RC-01A 7 19 In-Frame Intra-chr p21.31 p21.31 Seq+ 81961 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASL11A-DHRS12 RASL11A chr13 27271068 + DHRS12 chr13 51791257 - Exonic hg38 BLCA TCGA-GC-A3RC-01A 1 6 Out-of-frame Intra-chr q12.2 Tumor suppressor gene q14.3 Seq+ 81962 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF4-GATAD2A RNF4 chr4 2513797 + GATAD2A chr19 19436131 + Exonic hg38 BLCA TCGA-GC-A3RC-01A 1 4 CDS-5'UTR Inter-chr p16.3 p13.11 Transcription factor 81963 ChimerSeq TCGA FAWG TCGA_RNA-Seq DRAM1-NUP107 DRAM1 chr12 101897930 + NUP107 chr12 68741813 + Exonic hg38 BLCA TCGA-GC-A3RD-01A 96 504 Out-of-frame Intra-chr q23.2 q15 Seq+ 81964 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-DRAM1 FRS2 chr12 69532056 + DRAM1 chr12 101897863 + Exonic hg38 BLCA TCGA-GC-A3RD-01A 94 231 5'UTR-CDS Intra-chr q15 q23.2 Seq+ 81965 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGA-CDKN2A MGA chr15 41713496 + CDKN2A chr9 21968242 - Exonic hg38 BLCA TCGA-GC-A3RD-01A 17 49 In-Frame Inter-chr q15.1 Transcription factor p21.3 Oncogene Tumor suppressor gene Seq+ 81966 ChimerSeq TCGA FAWG TCGA_RNA-Seq IRAK1-MECP2 IRAK1 chrX 154018006 - MECP2 chrX 154032557 - Exonic hg38 BLCA TCGA-GC-A3RD-01A 8 80 Out-of-frame Intra-chr q28 TKL:IRAK q28 Transcription factor Seq+ 81967 ChimerSeq TCGA FAWG TCGA_RNA-Seq GDPD1-SMG8 GDPD1 chr17 59220751 + SMG8 chr17 59214805 + Exonic hg38 BLCA TCGA-GC-A3RD-01A 6 28 Out-of-frame Intra-chr q22 q22 Seq+ 81968 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRR-CHPT1 PTPRR chr12 70892679 - CHPT1 chr12 101716728 + Exonic hg38 BLCA TCGA-GC-A3RD-01A 7 23 Out-of-frame Intra-chr q15 q23.2 Seq+ 81969 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-PTPRR FRS2 chr12 69532056 + PTPRR chr12 70892977 - Exonic hg38 BLCA TCGA-GC-A3RD-01A 1 28 5'UTR-CDS Intra-chr q15 q15 Seq+ 81970 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC1-PEPD HDAC1 chr1 32327677 + PEPD chr19 33413643 - Exonic hg38 BLCA TCGA-GC-A3RD-01A 2 10 Out-of-frame Inter-chr p35.2 Tumor suppressor gene q13.11 Seq+ 81971 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNPTAB-CNOT2 GNPTAB chr12 101780152 - CNOT2 chr12 70310895 + Exonic hg38 BLCA TCGA-GC-A3RD-01A 2 9 In-Frame Intra-chr q23.2 q15 Seq+ 81972 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKN2A-MGA CDKN2A chr9 21970902 - MGA chr15 41727180 + Exonic hg38 BLCA TCGA-GC-A3RD-01A 2 4 In-Frame Inter-chr p21.3 Oncogene Tumor suppressor gene q15.1 Transcription factor Seq+ 81973 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCGRT-RPL13A FCGRT chr19 49514486 + RPL13A chr19 49490779 + Exonic hg38 BLCA TCGA-GC-A3RD-01A 1 1 In-Frame Intra-chr q13.33 q13.33 81974 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFAT5-CHST4 NFAT5 chr16 69566374 + CHST4 chr16 71536660 + Exonic hg38 BLCA TCGA-GC-A3YS-01A 8 18 5'UTR-5'UTR Intra-chr q22.1 Transcription factor q22.2 Seq+ 81975 ChimerSeq TCGA FAWG TCGA_RNA-Seq KRBA2-YBX2 KRBA2 chr17 8375900 - YBX2 chr17 7293538 - Exonic hg38 BLCA TCGA-GC-A3YS-01A 1 7 5'UTR-CDS Intra-chr p13.1 p13.1 Transcription factor Seq+ 81976 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIPOL1-NLGN1 MIPOL1 chr14 37308519 + NLGN1 chr3 174275315 + Exonic hg38 BLCA TCGA-GC-A3YS-01A 1 4 Out-of-frame Inter-chr q13.3 q26.31 Seq+ 81977 ChimerSeq TCGA FAWG TCGA_RNA-Seq FTO-TMEM231 FTO chr16 53704229 + TMEM231 chr16 75555973 - Exonic hg38 BLCA TCGA-GC-A3YS-01A 1 3 Out-of-frame Intra-chr q12.2 q23.1 81978 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIPK2-TMEM130 HIPK2 chr7 139620401 - TMEM130 chr7 98863400 - Exonic hg38 BLCA TCGA-GC-A3YS-01A 1000 1000 Out-of-frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q22.1 Seq+ 81979 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAG2-RGAG1 STAG2 chrX 123961856 + RGAG1 chrX 110450567 + Exonic hg38 BLCA TCGA-GC-A4ZW-01A 9 391 Out-of-frame Intra-chr q25 Oncogene Seq+ 81980 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAS2L1-SMTN GAS2L1 chr22 29308738 + SMTN chr22 31104316 + Exonic hg38 BLCA TCGA-GC-A4ZW-01A 24 137 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 81981 ChimerSeq TCGA FAWG TCGA_RNA-Seq GULP1-BOLL GULP1 chr2 188292166 + BOLL chr2 197743159 - Exonic hg38 BLCA TCGA-GC-A4ZW-01A 7 25 5'UTR-CDS Intra-chr q32.1 q33.1 Seq+ 81982 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHPRH-RCL1 SHPRH chr6 145952349 - RCL1 chr9 4860125 + Exonic hg38 BLCA TCGA-GC-A4ZW-01A 6 17 Out-of-frame Inter-chr q24.3 Tumor suppressor gene p24.1 Seq+ 81983 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0430-EEF2K KIAA0430 chr16 15600428 - EEF2K chr16 22280198 + Exonic hg38 BLCA TCGA-GC-A4ZW-01A 3 17 Out-of-frame Intra-chr p12.2 Seq+ 81984 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERI2-TMEM159 ERI2 chr16 20896308 - TMEM159 chr16 21161085 + Exonic hg38 BLCA TCGA-GC-A4ZW-01A 1 14 5'UTR-3'UTR Intra-chr p12.3 81985 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSL1D1-CCP110 RSL1D1 chr16 11847668 - CCP110 chr16 19527867 + Exonic hg38 BLCA TCGA-GC-A4ZW-01A 3 3 CDS-5'UTR Intra-chr p13.13 p12.3 Seq+ 81986 ChimerSeq TCGA FAWG TCGA_RNA-Seq FDFT1-TNKS FDFT1 chr8 11802931 + TNKS chr8 9704663 + Exonic hg38 BLCA TCGA-GC-A4ZW-01A 2 5 5'UTR-5'UTR Intra-chr p23.1 p23.1 Seq+ 81987 ChimerSeq TCGA FAWG TCGA_RNA-Seq RCL1-CDC37L1 RCL1 chr9 4860901 + CDC37L1 chr9 4706011 + Exonic hg38 BLCA TCGA-GC-A4ZW-01A 2 4 3'UTR-CDS Intra-chr p24.1 p24.1 81988 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAG2-AMMECR1 STAG2 chrX 123960866 + AMMECR1 chrX 110264599 - Exonic hg38 BLCA TCGA-GC-A4ZW-01A 1 2 5'UTR-CDS Intra-chr q25 Oncogene q23 Seq+ 81989 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD13-HSD17B12 PSMD13 chr11 237144 + HSD17B12 chr11 43798320 + Exonic hg38 BLCA TCGA-GC-A6I1-01A 4 13 Out-of-frame Intra-chr p15.5 p11.2 Seq+ 81990 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGFR-GRB10 EGFR chr7 55019365 + GRB10 chr7 50674658 - Exonic hg38 BLCA TCGA-GC-A6I3-01A 2 4 In-Frame Intra-chr p11.2 TK:EGFR Oncogene p12.1 Seq+ 81991 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHPRH-NDUFS5 SHPRH chr6 145964157 - NDUFS5 chr1 39028723 + Exonic hg38 BLCA TCGA-GD-A2C5-01A 110 575 5'UTR-5'UTR Inter-chr q24.3 Tumor suppressor gene p34.3 Seq+ 81992 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEDD4-GABRA5 NEDD4 chr15 55993511 - GABRA5 chr15 26868729 + Exonic hg38 BLCA TCGA-GD-A2C5-01A 4 13 5'UTR-5'UTR Intra-chr q21.3 Tumor suppressor gene q12 Seq+ 81993 ChimerSeq TCGA FAWG TCGA_RNA-Seq GGNBP2-ZMAT4 GGNBP2 chr17 36557336 + ZMAT4 chr8 40697401 - Exonic hg38 BLCA TCGA-GD-A2C5-01A 2 17 3'UTR-CDS Inter-chr Tumor suppressor gene p11.21 Transcription factor Seq+ 81994 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2CD2-APP C2CD2 chr21 41905724 - APP chr21 26000182 - Exonic hg38 BLCA TCGA-GD-A3OP-01A 4 18 In-Frame Intra-chr q22.3 q21.3 Seq+ 81995 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL5A1-PTGES2 COL5A1 chr9 134786048 + PTGES2 chr9 128125441 - Exonic hg38 BLCA TCGA-GD-A3OS-01A 53 208 In-Frame Intra-chr q34.3 q34.11 Seq+ 81996 ChimerSeq TCGA FAWG TCGA_RNA-Seq YAP1-CNTN5 YAP1 chr11 102114394 + CNTN5 chr11 99049591 + Exonic hg38 BLCA TCGA-GD-A3OS-01A 25 97 CDS-5'UTR Intra-chr q22.1 Tumor suppressor gene q22.1 81997 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRUB2-KCNT1 TRUB2 chr9 128321599 - KCNT1 chr9 135750098 + Exonic hg38 BLCA TCGA-GD-A3OS-01A 18 54 Out-of-frame Intra-chr q34.11 q34.3 Seq+ 81998 ChimerSeq TCGA FAWG TCGA_RNA-Seq YAP1-MYEOV YAP1 chr11 102114394 + MYEOV chr11 69341510 + Exonic hg38 BLCA TCGA-GD-A3OS-01A 11 78 CDS-3'UTR Intra-chr q22.1 Tumor suppressor gene q13.3 81999 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAM2-NOSTRIN STAM2 chr2 152175603 - NOSTRIN chr2 168831472 + Exonic hg38 BLCA TCGA-GD-A3OS-01A 12 52 CDS-3'UTR Intra-chr q23.3 Seq+ 82000 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM127-STAM TMEM127 chr2 96265869 - STAM chr10 17684675 + Exonic hg38 BLCA TCGA-GD-A3OS-01A 8 65 5'UTR-5'UTR Inter-chr q11.2 Tumor suppressor gene p12.33 Seq+ 82001 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH2D6-NCOA2 SH2D6 chr2 85422690 + NCOA2 chr8 70170379 - Exonic hg38 BLCA TCGA-GD-A3OS-01A 11 29 5'UTR-5'UTR Inter-chr p11.2 q13.3 Oncogene Transcription factor Seq+ 82002 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDGFD-DCUN1D5 PDGFD chr11 104163804 - DCUN1D5 chr11 103062414 - Exonic hg38 BLCA TCGA-GD-A3OS-01A 10 26 In-Frame Intra-chr q22.3 q22.3 Seq+ 82003 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGR-FLJ42102 PGR chr11 101091760 - FLJ42102 chr11 71393958 - Exonic hg38 BLCA TCGA-GD-A3OS-01A 4 40 3'UTR-3'UTR Intra-chr q22.1 Tumor suppressor gene Transcription factor q13.4 82004 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM28-CHMP2A TRIM28 chr19 58550284 + CHMP2A chr19 58552438 - Exonic hg38 BLCA TCGA-GD-A3OS-01A 4 12 In-Frame Intra-chr q13.43 q13.43 Seq+ 82005 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXDC2-VAMP5 PLXDC2 chr10 19817191 + VAMP5 chr2 85591725 + Exonic hg38 BLCA TCGA-GD-A3OS-01A 3 12 Out-of-frame Inter-chr p12.31 p11.2 Seq+ 82006 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDZRN4-WTAPP1 PDZRN4 chr12 41191544 + WTAPP1 chr11 102798024 + Exonic hg38 BLCA TCGA-GD-A3OS-01A 1 17 CDS-5'UTR Inter-chr q12 q22.2 82007 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXDC2-VAMP8 PLXDC2 chr10 19817191 + VAMP8 chr2 85579009 + Exonic hg38 BLCA TCGA-GD-A3OS-01A 1 10 Out-of-frame Inter-chr p12.31 p11.2 82008 ChimerSeq TCGA FAWG TCGA_RNA-Seq CIAO1-SH2D6 CIAO1 chr2 96267469 + SH2D6 chr2 85422203 + Exonic hg38 BLCA TCGA-GD-A3OS-01A 1 9 CDS-5'UTR Intra-chr q11.2 p11.2 82009 ChimerSeq TCGA FAWG TCGA_RNA-Seq YES1-SCFD2 YES1 chr18 812114 - SCFD2 chr4 52920870 - Exonic hg38 BLCA TCGA-GU-A42P-01A 10 75 5'UTR-CDS Inter-chr p11.32 q12 Seq+ 82010 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIR-TMEM27 PIR chrX 15491162 - TMEM27 chrX 15664395 - Exonic hg38 BLCA TCGA-GU-A42Q-01A 11 41 Out-of-frame Intra-chr p22.2 p22.2 Seq+ 82011 ChimerSeq TCGA FAWG TCGA_RNA-Seq TECR-ICAM3 TECR chr19 14529711 + ICAM3 chr19 10338948 - Exonic hg38 BLCA TCGA-GU-A42Q-01A 5 30 Out-of-frame Intra-chr p13.12 p13.2 Seq+ 82012 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF808-MISP ZNF808 chr19 52527711 + MISP chr19 756890 + Exonic hg38 BLCA TCGA-GU-A42Q-01A 5 13 5'UTR-5'UTR Intra-chr q13.41 Transcription factor p13.3 82013 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF2-SOS2 ATF2 chr2 175111568 - SOS2 chr14 50174552 - Exonic hg38 BLCA TCGA-GU-A42Q-01A 3 14 In-Frame Inter-chr q31.1 Transcription factor q21.3 Seq+ 82014 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMP7-MACROD2 BMP7 chr20 57202475 - MACROD2 chr20 15431405 + Exonic hg38 BLCA TCGA-GU-A42Q-01A 4 10 Out-of-frame Intra-chr q13.31 p12.1 Seq+ 82015 ChimerSeq TCGA FAWG TCGA_RNA-Seq STN1-PCGF3 STN1 chr10 103905091 - PCGF3 chr4 761279 + Exonic hg38 BLCA TCGA-GU-A42Q-01A 2 9 Out-of-frame Inter-chr q24.33 p16.3 82016 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREBBP-CASKIN1 CREBBP chr16 3744894 - CASKIN1 chr16 2190358 - Exonic hg38 BLCA TCGA-GU-A42R-01A 16 62 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 82017 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED12L-PABPC1L MED12L chr3 151430380 + PABPC1L chr20 44939126 + Exonic hg38 BLCA TCGA-GU-A42R-01A 1 2 CDS-5'UTR Inter-chr q25.1 q13.12 82018 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAF2-CCDC183 TRAF2 chr9 136882710 + CCDC183 chr9 136806504 + Exonic hg38 BLCA TCGA-GU-A762-01A 1 2 5'UTR-CDS Intra-chr q34.3 Tumor suppressor gene q34.3 82019 ChimerSeq TCGA FAWG TCGA_RNA-Seq E2F3-MYL4 E2F3 chr6 20403832 + MYL4 chr17 47209389 + Exonic hg38 BLCA TCGA-GU-A764-01A 19 113 CDS-5'UTR Inter-chr p22.3 Tumor suppressor gene Transcription factor q21.32 Seq+ 82020 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIPA1L3-GPI SIPA1L3 chr19 38029156 + GPI chr19 34393248 + Exonic hg38 BLCA TCGA-GU-A764-01A 18 74 5'UTR-CDS Intra-chr q13.13 Seq+ 82021 ChimerSeq TCGA FAWG TCGA_RNA-Seq UCK2-MRPL9 UCK2 chr1 165827932 + MRPL9 chr1 151762500 - Exonic hg38 BLCA TCGA-GU-A764-01A 1 22 Out-of-frame Intra-chr q24.1 q21.3 Seq+ 82022 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARP14-DIRC2 PARP14 chr3 122720388 + DIRC2 chr3 122879263 + Exonic hg38 BLCA TCGA-GU-A764-01A 3 10 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 82023 ChimerSeq TCGA FAWG TCGA_RNA-Seq UCK2-TDRKH UCK2 chr1 165827932 + TDRKH chr1 151775166 - Exonic hg38 BLCA TCGA-GU-A764-01A 1 14 In-Frame Intra-chr q24.1 q21.3 82024 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC35E2B-PFKFB4 SLC35E2B chr1 1669664 - PFKFB4 chr3 48525669 - Exonic hg38 BLCA TCGA-GU-A764-01A 2 7 In-Frame Inter-chr p36.33 p21.31 Seq+ 82025 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB7B-NTRK1 ZBTB7B chr1 155002943 + NTRK1 chr1 156837726 + Exonic hg38 BLCA TCGA-GU-A764-01A 3 2 5'UTR-5'UTR Intra-chr q21.3 Transcription factor q23.1 Oncogene 82026 ChimerSeq TCGA FAWG TCGA_RNA-Seq CC2D1A-RRBP1 CC2D1A chr19 13923811 + RRBP1 chr20 17680075 - Exonic hg38 BLCA TCGA-GU-A764-01A 1 6 CDS-5'UTR Inter-chr p13.12 Transcription factor p12.1 Seq+ 82027 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHBDD2-EGFR RHBDD2 chr7 75883848 + EGFR chr7 55043833 + Exonic hg38 BLCA TCGA-GU-A766-01A 4 11 5'UTR-5'UTR Intra-chr q11.23 p11.2 TK:EGFR Oncogene 82028 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOA-DCAF1 RHOA chr3 49411820 - DCAF1 chr3 51433264 - Exonic hg38 BLCA TCGA-GU-A766-01A 1 3 5'UTR-CDS Intra-chr p21.31 Oncogene Tumor suppressor gene p21.2 82029 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEX5-PRB1 PEX5 chr12 7199113 + PRB1 chr12 11351929 - Exonic hg38 BLCA TCGA-GU-A767-01A 63 30 CDS-5'UTR Intra-chr p13.31 Tumor suppressor gene Seq+ 82030 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEX5-PRB2 PEX5 chr12 7199113 + PRB2 chr12 11391648 - Exonic hg38 BLCA TCGA-GU-A767-01A 28 170 CDS-3'UTR Intra-chr p13.31 p13.2 Seq+ 82031 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIKFYVE-MLPH PIKFYVE chr2 208320359 + MLPH chr2 237542567 + Exonic hg38 BLCA TCGA-GU-A767-01A 10 43 In-Frame Intra-chr q34 q37.3 Seq+ 82032 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D8-LIPF TBC1D8 chr2 101050401 - LIPF chr10 88678445 + Exonic hg38 BLCA TCGA-GU-A767-01A 5 49 Out-of-frame Inter-chr q11.2 q23.31 Seq+ 82033 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBNL2-PLAC8 MBNL2 chr13 97222531 + PLAC8 chr4 83105020 - Exonic hg38 BLCA TCGA-GU-A767-01A 4 28 5'UTR-CDS Inter-chr q32.1 Transcription factor q21.22 Seq+ 82034 ChimerSeq TCGA FAWG TCGA_RNA-Seq KPNA3-SPRYD7 KPNA3 chr13 49792438 - SPRYD7 chr13 49921580 - Exonic hg38 BLCA TCGA-GU-A767-01A 2 7 In-Frame Intra-chr q14.2 q14.2 Seq+ 82035 ChimerSeq TCGA FAWG TCGA_RNA-Seq OPHN1-TNMD OPHN1 chrX 68274738 - TNMD chrX 100593895 + Exonic hg38 BLCA TCGA-GU-A767-01A 1 7 In-Frame Intra-chr q12 q22.1 Seq+ 82036 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRRS1-PALMD FRRS1 chr1 99740793 - PALMD chr1 99662319 + Exonic hg38 BLCA TCGA-GU-A767-01A 2 1 In-Frame Intra-chr p21.2 p21.2 Seq+ 82037 ChimerSeq TCGA FAWG TCGA_RNA-Seq YIPF6-NUGGC YIPF6 chrX 68499123 + NUGGC chr8 28047612 - Exonic hg38 BLCA TCGA-GU-A767-01A 1 4 In-Frame Inter-chr q12 p21.1 82038 ChimerSeq TCGA FAWG TCGA_RNA-Seq BIRC6-MYCNOS BIRC6 chr2 32549481 + MYCNOS chr2 15941097 - Exonic hg38 BLCA TCGA-GU-AATO-01A 4 21 CDS-3'UTR Intra-chr p22.3 p24.3 82039 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD5-RAD18 SETD5 chr3 9448630 + RAD18 chr3 8963593 - Exonic hg38 BLCA TCGA-GU-AATP-01A 3 3 CDS-5'UTR Intra-chr p25.3 p25.3 Seq+ 82040 ChimerSeq TCGA FAWG TCGA_RNA-Seq THOC5-PIBF1 THOC5 chr22 29520998 - PIBF1 chr13 72931165 + Exonic hg38 BLCA TCGA-GU-AATP-01A 1 4 In-Frame Inter-chr q12.2 q21.33 Seq+ 82041 ChimerSeq TCGA FAWG TCGA_RNA-Seq IQSEC1-WNT7A IQSEC1 chr3 12913428 - WNT7A chr3 13875173 - Exonic hg38 BLCA TCGA-GV-A3JV-01A 100 703 Out-of-frame Intra-chr p25.2 p25.1 Tumor suppressor gene Seq+ 82042 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPARG-IQSEC1 PPARG chr3 12417154 + IQSEC1 chr3 12941865 - Exonic hg38 BLCA TCGA-GV-A3JV-01A 4 67 Out-of-frame Intra-chr p25.2 Oncogene Tumor suppressor gene Transcription factor p25.2 Seq+ 82043 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNT7A-PPFIA1 WNT7A chr3 13854532 - PPFIA1 chr11 70374918 + Exonic hg38 BLCA TCGA-GV-A3JV-01A 6 20 Out-of-frame Inter-chr p25.1 Tumor suppressor gene q13.3 Seq+ 82044 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCP2-TBCA DCP2 chr5 112976986 + TBCA chr5 77708347 - Exonic hg38 BLCA TCGA-GV-A3JW-01A 59 105 In-Frame Intra-chr q22.2 q14.1 Seq+ 82045 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPDU1-GUCD1 MPDU1 chr17 7583965 + GUCD1 chr22 24549001 - Exonic hg38 BLCA TCGA-GV-A3JW-01A 9 32 In-Frame Inter-chr p13.1 q11.23 Seq+ 82046 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX29-NCAN SNX29 chr16 12027444 + NCAN chr19 19233789 + Exonic hg38 BLCA TCGA-GV-A3JW-01A 9 17 In-Frame Inter-chr p13.13 p13.11 Seq+ 82047 ChimerSeq TCGA FAWG TCGA_RNA-Seq PI4KAP2-1183D5.13 PI4KAP2 chr22 21514137 - 1183D5.13 chr22 21307028 - Exonic hg38 BLCA TCGA-GV-A3JW-01A 5 22 Out-of-frame Intra-chr q11.21 82048 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCLRE1C-NMT2 DCLRE1C chr10 14949036 - NMT2 chr10 15128458 - Exonic hg38 BLCA TCGA-GV-A3JW-01A 6 3 In-Frame Intra-chr p13 p13 Seq+ 82049 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIDINS220-EYS KIDINS220 chr2 8770670 - EYS chr6 63999183 - Exonic hg38 BLCA TCGA-GV-A3JW-01A 2 10 In-Frame Inter-chr p25.1 q12 Seq+ 82050 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSUN2-TBL1Y NSUN2 chr5 6632599 - TBL1Y chrY 7080732 + Exonic hg38 BLCA TCGA-GV-A3JW-01A 2 3 Out-of-frame Inter-chr p15.31 p11.2 Seq+ 82051 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF19A-PABPC1 RNF19A chr8 100274953 - PABPC1 chr8 100718280 - Exonic hg38 BLCA TCGA-GV-A3JW-01A 1 4 In-Frame Intra-chr q22.2 q22.3 82052 ChimerSeq TCGA FAWG TCGA_RNA-Seq QSOX1-TOR1AIP1 QSOX1 chr1 180178884 + TOR1AIP1 chr1 179900126 + Exonic hg38 BLCA TCGA-GV-A3JW-01A 1 2 Out-of-frame Intra-chr q25.2 q25.2 82053 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK38-ZNF184 STK38 chr6 36506583 - ZNF184 chr6 27457409 - Exonic hg38 BLCA TCGA-GV-A3JZ-01A 7 76 In-Frame Intra-chr p21.31 p22.1 Transcription factor Seq+ 82054 ChimerSeq TCGA FAWG TCGA_RNA-Seq URI1-ZNF33A URI1 chr19 30005708 + ZNF33A chr10 38054378 + Exonic hg38 BLCA TCGA-GV-A3JZ-01A 2 19 In-Frame Inter-chr q12 p11.1 Transcription factor Seq+ 82055 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRF1-MEP1A ADGRF1 chr6 47042191 - MEP1A chr6 46833074 + Exonic hg38 BLCA TCGA-GV-A3JZ-01A 2 12 5'UTR-CDS Intra-chr p12.3 p12.3 82056 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF213-IL22RA1 RNF213 chr17 80263778 + IL22RA1 chr1 24138714 - Exonic hg38 BLCA TCGA-GV-A3JZ-01A 3 6 In-Frame Inter-chr q25.3 Oncogene p36.11 Seq+ 82057 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKAL1-RCAN2 CDKAL1 chr6 20781265 + RCAN2 chr6 46456978 - Exonic hg38 BLCA TCGA-GV-A3JZ-01A 2 9 CDS-5'UTR Intra-chr p22.3 p12.3 Seq+ 82058 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFS2-PSMD4 NDUFS2 chr1 161206597 + PSMD4 chr1 151262161 + Exonic hg38 BLCA TCGA-GV-A3JZ-01A 2 7 Out-of-frame Intra-chr q23.3 q21.3 Seq+ 82059 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKAL1-TBC1D1 CDKAL1 chr6 20548705 + TBC1D1 chr4 38089932 + Exonic hg38 BLCA TCGA-GV-A3JZ-01A 2 3 In-Frame Inter-chr p22.3 p14 Seq+ 82060 ChimerSeq TCGA FAWG TCGA_RNA-Seq TK1-DNAH17 TK1 chr17 78175050 - DNAH17 chr17 78427108 - Exonic hg38 BLCA TCGA-GV-A3QF-01A 2 33 In-Frame Intra-chr q25.3 q25.3 Seq+ 82061 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACOT7-DNAJC11 ACOT7 chr1 6318492 - DNAJC11 chr1 6667810 - Exonic hg38 BLCA TCGA-GV-A3QF-01A 2 6 Out-of-frame Intra-chr p36.31 p36.31 Tumor suppressor gene Seq+ 82062 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANGAP1-SNU13 RANGAP1 chr22 41274600 - SNU13 chr22 41680364 - Exonic hg38 BLCA TCGA-GV-A3QF-01A 1 9 In-Frame Intra-chr q13.2 q13.2 82063 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM169A-ANKRD31 FAM169A chr5 74838965 - ANKRD31 chr5 75118297 - Exonic hg38 BLCA TCGA-GV-A3QF-01A 1 6 In-Frame Intra-chr q13.3 q13.3 Seq+ 82064 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNBP1L-DR1 FNBP1L chr1 93499583 + DR1 chr1 93353908 + Exonic hg38 BLCA TCGA-GV-A3QF-01A 1 3 Out-of-frame Intra-chr p22.1 p22.1 Transcription factor 82065 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA3C-CD36 SEMA3C chr7 80916679 - CD36 chr7 80664406 + Exonic hg38 BLCA TCGA-GV-A3QF-01A 1 3 Out-of-frame Intra-chr q21.11 q21.11 Seq+ 82066 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPM1-ALK TPM1 chr15 63062645 + ALK chr2 29223528 - Exonic hg38 BLCA TCGA-GV-A3QG-01A 121 382 In-Frame Inter-chr q22.2 p23.1 TK:ALK Oncogene Seq+ 82067 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLOCK-UGT2A3 CLOCK chr4 55546482 - UGT2A3 chr4 68932759 - Exonic hg38 BLCA TCGA-GV-A3QH-01A 21 83 5'UTR-5'UTR Intra-chr q12 Transcription factor Seq+ 82068 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALCAM-SH3KBP1 ALCAM chr3 105367481 + SH3KBP1 chrX 19588802 - Exonic hg38 BLCA TCGA-GV-A3QH-01A 16 93 In-Frame Inter-chr q13.11 p22.12 Seq+ 82069 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBOAT1-DCDC2 MBOAT1 chr6 20126517 - DCDC2 chr6 24302044 - Exonic hg38 BLCA TCGA-GV-A3QH-01A 12 46 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 82070 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP38-IL17F USP38 chr4 143197924 + IL17F chr6 52237168 - Exonic hg38 BLCA TCGA-GV-A3QH-01A 15 18 Out-of-frame Inter-chr q31.21 p12.2 Seq+ 82071 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP29-MID2 ARHGAP29 chr1 94237415 - MID2 chrX 107903958 + Exonic hg38 BLCA TCGA-GV-A3QH-01A 2 8 Out-of-frame Inter-chr p22.1 Tumor suppressor gene q22.3 Seq+ 82072 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPF2-MED24 WIPF2 chr17 40219492 + MED24 chr17 40057634 - Exonic hg38 BLCA TCGA-GV-A3QI-01A 13 78 5'UTR-5'UTR Intra-chr q21.2 q21.1 Seq+ 82073 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF12-GRIK4 ARHGEF12 chr11 120431911 + GRIK4 chr11 120802693 + Exonic hg38 BLCA TCGA-GV-A3QI-01A 11 26 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Seq+ 82074 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK9-SLC15A1 DOCK9 chr13 99086223 - SLC15A1 chr13 98709911 - Exonic hg38 BLCA TCGA-GV-A3QI-01A 9 26 In-Frame Intra-chr q32.3 q32.3 Seq+ 82075 ChimerSeq TCGA FAWG TCGA_RNA-Seq COMMD1-FARS2 COMMD1 chr2 62000982 + FARS2 chr6 5771291 + Exonic hg38 BLCA TCGA-GV-A3QI-01A 6 36 Out-of-frame Inter-chr p15 p25.1 Seq+ 82076 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENOX2-FIRRE ENOX2 chrX 130688863 - FIRRE chrX 131709556 - Exonic hg38 BLCA TCGA-GV-A3QI-01A 5 36 CDS-3'UTR Intra-chr q26.1 q26.2 82077 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPRL3-KIFC2 NPRL3 chr16 123433 - KIFC2 chr8 144472210 + Exonic hg38 BLCA TCGA-GV-A3QI-01A 3 40 Out-of-frame Inter-chr p13.3 q24.3 Seq+ 82078 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM248-TYW1 TMEM248 chr7 66921461 + TYW1 chr7 67083430 + Exonic hg38 BLCA TCGA-GV-A3QI-01A 11 2 5'UTR-5'UTR Intra-chr q11.21 q11.21 Seq+ 82079 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYT16-MNAT1 SYT16 chr14 61970311 + MNAT1 chr14 60879714 + Exonic hg38 BLCA TCGA-GV-A3QI-01A 6 20 Out-of-frame Intra-chr q23.2 q23.1 82080 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF38-PAX5 RNF38 chr9 36424613 - PAX5 chr9 36923484 - Exonic hg38 BLCA TCGA-GV-A3QI-01A 4 13 5'UTR-CDS Intra-chr p13.2 p13.2 Oncogene Tumor suppressor gene Transcription factor 82081 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHRS2-GAPDH DHRS2 chr14 23636772 + GAPDH chr12 6536494 + Exonic hg38 BLCA TCGA-GV-A3QI-01A 1 11 5'UTR-5'UTR Inter-chr q11.2 p13.31 82082 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBD3-ZNF823 MBD3 chr19 1577144 - ZNF823 chr19 11725327 - Exonic hg38 BLCA TCGA-GV-A3QI-01A 1000 1000 3'UTR-CDS Intra-chr p13.3 Transcription factor p13.2 Transcription factor 82083 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM2A-GSTP1 KDM2A chr11 67121358 + GSTP1 chr11 67584134 + Exonic hg38 BLCA TCGA-GV-A3QK-01B 2 18 Out-of-frame Intra-chr q13.2 Transcription factor q13.2 Tumor suppressor gene Seq+ 82084 ChimerSeq TCGA FAWG TCGA_RNA-Seq DEK-KIF25 DEK chr6 18263843 - KIF25 chr6 168030773 + Exonic hg38 BLCA TCGA-GV-A40E-01A 13 55 Out-of-frame Intra-chr p22.3 Oncogene q27 Seq+ 82085 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYH9-TRIOBP MYH9 chr22 36305930 - TRIOBP chr22 37751772 + Exonic hg38 BLCA TCGA-GV-A40E-01A 11 60 Out-of-frame Intra-chr q12.3 Oncogene Tumor suppressor gene q13.1 Seq+ 82086 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-EFNA1 PVT1 chr8 127890998 + EFNA1 chr1 155131339 + Exonic hg38 BLCA TCGA-GV-A40E-01A 11 22 5'UTR-CDS Inter-chr q24.21 q22 Seq+ 82087 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGAT5B-CYP11A1 MGAT5B chr17 76882298 + CYP11A1 chr15 74348055 - Exonic hg38 BLCA TCGA-GV-A40E-01A 8 13 In-Frame Inter-chr q25.2 q24.1 Seq+ 82088 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANXA8-SPATA17 ANXA8 chr10 47483913 - SPATA17 chr1 217648882 + Exonic hg38 BLCA TCGA-GV-A40E-01A 5 9 Out-of-frame Inter-chr q11.22 q41 82089 ChimerSeq TCGA FAWG TCGA_RNA-Seq NHSL1-SLCO2B1 NHSL1 chr6 138441983 - SLCO2B1 chr11 75162655 + Exonic hg38 BLCA TCGA-GV-A40E-01A 3 10 In-Frame Inter-chr q24.1 q13.4 Seq+ 82090 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT18-BECN1 GALNT18 chr11 11432621 - BECN1 chr17 42823879 - Exonic hg38 BLCA TCGA-GV-A40E-01A 2 3 CDS-5'UTR Inter-chr p15.4 q21.31 Tumor suppressor gene Seq+ 82091 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF564-COL5A3 ZNF564 chr19 12551330 - COL5A3 chr19 10001881 - Exonic hg38 BLCA TCGA-GV-A40G-01A 6 19 In-Frame Intra-chr p13.2 Transcription factor p13.2 Seq+ 82092 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYBL2-TOX2 MYBL2 chr20 43687072 + TOX2 chr20 44006547 + Exonic hg38 BLCA TCGA-GV-A40G-01A 3 14 Out-of-frame Intra-chr q13.12 Transcription factor q13.12 Seq+ 82093 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDXP-SLC17A9 PDXP chr22 37659356 + SLC17A9 chr20 62956765 + Exonic hg38 BLCA TCGA-GV-A40G-01A 2 6 Out-of-frame Inter-chr q13.1 q13.33 Seq+ 82094 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA2-ALKAL1 NCOA2 chr8 70296744 - ALKAL1 chr8 52542445 - Exonic hg38 BLCA TCGA-GV-A6ZA-01A 3 30 5'UTR-CDS Intra-chr q13.3 Oncogene Transcription factor q11.23 82095 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHMT1-PPP1R37 EHMT1 chr9 137728529 + PPP1R37 chr19 45138514 + Exonic hg38 BLCA TCGA-H4-A2HO-01A 6 29 In-Frame Inter-chr q34.3 q13.32 Seq+ 82096 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR48-PPARG WDR48 chr3 39063190 + PPARG chr3 12379704 + Exonic hg38 BLCA TCGA-H4-A2HO-01A 1 13 In-Frame Intra-chr p22.2 Tumor suppressor gene p25.2 Oncogene Tumor suppressor gene Transcription factor 82097 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEAK1-VPS33B PEAK1 chr15 77283883 - VPS33B chr15 91017885 - Exonic hg38 BLCA TCGA-H4-A2HO-01A 1 11 5'UTR-5'UTR Intra-chr q24.3 q26.1 82098 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDI2-DNAJC16 DDI2 chr1 15651895 + DNAJC16 chr1 15544399 + Exonic hg38 BLCA TCGA-H4-A2HO-01A 1 8 In-Frame Intra-chr p36.21 p36.21 82099 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRMU-FBLN1 TRMU chr22 46343368 + FBLN1 chr22 45562912 + Exonic hg38 BLCA TCGA-H4-A2HO-01A 1 5 Out-of-frame Intra-chr q13.31 q13.31 Tumor suppressor gene 82100 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR2J3-ORC5 POLR2J3 chr7 102566997 - ORC5 chr7 104136893 - Exonic hg38 BLCA TCGA-H4-A2HQ-01A 4 21 3'UTR-CDS Intra-chr q22.1 q22.2 Seq+ 82101 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPO6-DRC3 XPO6 chr16 28152659 - DRC3 chr17 17977582 + Exonic hg38 BLCA TCGA-H4-A2HQ-01A 1 26 CDS-5'UTR Inter-chr p12.1 p11.2 82102 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWOX-NUDT7 WWOX chr16 78425055 + NUDT7 chr16 77741582 + Exonic hg38 BLCA TCGA-H4-A2HQ-01A 2 5 Out-of-frame Intra-chr q23.1 Tumor suppressor gene q23.1 Seq+ 82103 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-IFT140 SHANK2 chr11 71056481 - IFT140 chr16 1511150 - Exonic hg38 BLCA TCGA-H4-A2HQ-01A 1 7 In-Frame Inter-chr q13.4 p13.3 82104 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREBBP-PRSS22 CREBBP chr16 3850297 - PRSS22 chr16 2854022 - Exonic hg38 BLCA TCGA-H4-A2HQ-01A 1 4 CDS-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene 82105 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF598-C16orf62 ZNF598 chr16 2009524 - C16orf62 chr16 19691353 + Exonic hg38 BLCA TCGA-HQ-A2OE-01A 32 186 Out-of-frame Intra-chr p13.3 Transcription factor p12.3 Seq+ 82106 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSBP3-EDA SSBP3 chr1 54401861 - EDA chrX 69860857 + Exonic hg38 BLCA TCGA-HQ-A2OE-01A 16 84 In-Frame Inter-chr p32.3 q13.1 Seq+ 82107 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPINK1-C5orf46 SPINK1 chr5 147828022 - C5orf46 chr5 147901773 - Exonic hg38 BLCA TCGA-HQ-A2OE-01A 11 74 Out-of-frame Intra-chr q32 q32 Seq+ 82108 ChimerSeq TCGA FAWG TCGA_RNA-Seq STX3-OOSP1 STX3 chr11 59793514 + OOSP1 chr11 59942847 + Exonic hg38 BLCA TCGA-HQ-A2OE-01A 9 77 CDS-3'UTR Intra-chr q12.1 q12.1 82109 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF544-CCDC61 ZNF544 chr19 58246794 + CCDC61 chr19 46003008 + Exonic hg38 BLCA TCGA-HQ-A2OE-01A 10 25 CDS-5'UTR Intra-chr q13.43 Transcription factor q13.32 Seq+ 82110 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP295-WDR90 CEP295 chr11 93706897 + WDR90 chr16 655307 + Exonic hg38 BLCA TCGA-HQ-A2OE-01A 5 31 Out-of-frame Inter-chr q21 p13.3 82111 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP85-TRIM80P NUP85 chr17 75226157 + TRIM80P chr17 75079053 + Exonic hg38 BLCA TCGA-HQ-A2OE-01A 5 15 Out-of-frame Intra-chr q25.1 q25.1 82112 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNPAT-TRIM67 GNPAT chr1 231251143 + TRIM67 chr1 231208947 + Exonic hg38 BLCA TCGA-HQ-A2OE-01A 4 9 Out-of-frame Intra-chr q42.2 q42.2 Seq+ 82113 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC22A23-ECHDC1 SLC22A23 chr6 3323834 - ECHDC1 chr6 127331030 - Exonic hg38 BLCA TCGA-HQ-A2OE-01A 2 14 Out-of-frame Intra-chr p25.2 q22.33 Seq+ 82114 ChimerSeq TCGA FAWG TCGA_RNA-Seq C12orf73-GLT8D2 C12orf73 chr12 103965516 - GLT8D2 chr12 104021491 - Exonic hg38 BLCA TCGA-HQ-A2OE-01A 2 9 5'UTR-5'UTR Intra-chr q23.3 q23.3 Seq+ 82115 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPARG-CRYBA4 PPARG chr3 12381491 + CRYBA4 chr22 26623234 + Exonic hg38 BLCA TCGA-HQ-A2OE-01A 1 5 In-Frame Inter-chr p25.2 Oncogene Tumor suppressor gene Transcription factor q12.1 82116 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPIN1-TBC1D7 LPIN1 chr2 11765733 + TBC1D7 chr6 13325174 - Exonic hg38 BLCA TCGA-HQ-A2OE-01A 1 3 Out-of-frame Inter-chr p25.1 p24.1 82117 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOCS7-MAPT SOCS7 chr17 38353032 + MAPT chr17 46023956 + Exonic hg38 BLCA TCGA-HQ-A2OF-01A 32 65 3'UTR-3'UTR Intra-chr q12 Seq+ 82118 ChimerSeq TCGA FAWG TCGA_RNA-Seq TADA2A-PLXDC1 TADA2A chr17 37406949 + PLXDC1 chr17 39083540 - Exonic hg38 BLCA TCGA-HQ-A2OF-01A 28 51 3'UTR-CDS Intra-chr q12 q12 Seq+ 82119 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOXB3-MAPT HOXB3 chr17 48573837 - MAPT chr17 45991460 + Exonic hg38 BLCA TCGA-HQ-A2OF-01A 13 64 5'UTR-3'UTR Intra-chr q21.32 Transcription factor Seq+ 82120 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBTD1-SRCIN1 MBTD1 chr17 51192782 - SRCIN1 chr17 38578791 - Exonic hg38 BLCA TCGA-HQ-A2OF-01A 4 16 CDS-5'UTR Intra-chr q21.33 q12 Seq+ 82121 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP23-GOSR2 ARHGAP23 chr17 38500628 + GOSR2 chr17 46932067 + Exonic hg38 BLCA TCGA-HQ-A2OF-01A 3 19 3'UTR-CDS Intra-chr q12 q21.32 Seq+ 82122 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPEPPS-IKZF3 NPEPPS chr17 47587344 + IKZF3 chr17 39792933 - Exonic hg38 BLCA TCGA-HQ-A2OF-01A 4 13 Out-of-frame Intra-chr q21.32 q21.1 Tumor suppressor gene Transcription factor Seq+ 82123 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB7-ACACA GRB7 chr17 39746202 + ACACA chr17 37210490 - Exonic hg38 BLCA TCGA-HQ-A2OF-01A 4 12 CDS-5'UTR Intra-chr q12 Seq+ 82124 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL10-MTPAP MRPL10 chr17 47826637 - MTPAP chr10 30322617 - Exonic hg38 BLCA TCGA-HQ-A2OF-01A 4 11 Out-of-frame Inter-chr q21.32 p11.23 Seq+ 82125 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPATCH8-STAC2 GPATCH8 chr17 44464472 - STAC2 chr17 39218173 - Exonic hg38 BLCA TCGA-HQ-A2OF-01A 3 7 Out-of-frame Intra-chr q21.31 q12 Seq+ 82126 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP1-AGAP1 AGAP1 chr2 235507073 + AGAP1 chr2 235709179 + Exonic hg38 BLCA TCGA-HQ-A2OF-01A 3 5 Out-of-frame Intra-chr q37.2 q37.2 82127 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBL1-GPCPD1 RBL1 chr20 37095773 - GPCPD1 chr20 5575978 - Exonic hg38 BLCA TCGA-HQ-A2OF-01A 1 10 In-Frame Intra-chr q11.23 Tumor suppressor gene p12.3 Seq+ 82128 ChimerSeq TCGA FAWG TCGA_RNA-Seq SORL1-DISC1FP1 SORL1 chr11 121625277 + DISC1FP1 chr11 90801766 + Exonic hg38 BLCA TCGA-HQ-A5ND-01A 1 7 CDS-5'UTR Intra-chr q24.1 q14.3 82129 ChimerSeq TCGA FAWG TCGA_RNA-Seq RB1-WDFY2 RB1 chr13 48307406 + WDFY2 chr13 51751310 + Exonic hg38 BLCA TCGA-HQ-A5NE-01A 3 13 Out-of-frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.3 Seq+ 82130 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM39-C20orf203 RBM39 chr20 35740824 - C20orf203 chr20 32651981 - Exonic hg38 BLCA TCGA-HQ-A5NE-01A 2 14 5'UTR-5'UTR Intra-chr q11.22 q11.21 Seq+ 82131 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL9R-VAMP7 IL9R chrX 155997787 + VAMP7 chrX 155919813 + Exonic hg38 BLCA TCGA-HQ-A5NE-01A 1 2 3'UTR-3'UTR Intra-chr q28 q28 82132 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNMT3B-DUSP15 DNMT3B chr20 32789012 + DUSP15 chr20 31869597 - Exonic hg38 BLCA TCGA-K4-A3WS-01A 2 14 In-Frame Intra-chr q11.21 Tumor suppressor gene q11.21 Seq+ 82133 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPARD-CERS3 PPARD chr6 35347150 + CERS3 chr15 100479478 - Exonic hg38 BLCA TCGA-K4-A3WS-01A 1 10 Out-of-frame Inter-chr p21.31 Transcription factor q26.3 82134 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARG-BCAS1 RARG chr12 53227362 - BCAS1 chr20 54058723 - Exonic hg38 BLCA TCGA-K4-A3WS-01A 2 6 CDS-5'UTR Inter-chr q13.13 Transcription factor q13.2 Seq+ 82135 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZCCHC8-TOP3A ZCCHC8 chr12 122499973 - TOP3A chr17 18292852 - Exonic hg38 BLCA TCGA-K4-A3WU-01B 5 64 5'UTR-5'UTR Inter-chr q24.31 Seq+ 82136 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCKDHB-TTK BCKDHB chr6 80203212 + TTK chr6 80042119 + Exonic hg38 BLCA TCGA-K4-A3WU-01B 8 37 In-Frame Intra-chr q14.1 q14.1 Other:TTK Seq+ 82137 ChimerSeq TCGA FAWG TCGA_RNA-Seq HPGD-GUCY1A3 HPGD chr4 174521944 - GUCY1A3 chr4 155708236 + Exonic hg38 BLCA TCGA-K4-A3WU-01B 5 47 Out-of-frame Intra-chr q34.1 Tumor suppressor gene q32.1 Seq+ 82138 ChimerSeq TCGA FAWG TCGA_RNA-Seq FANCD2-CIDECP FANCD2 chr3 10028721 + CIDECP chr3 10018071 - Exonic hg38 BLCA TCGA-K4-A3WU-01B 3 18 Out-of-frame Intra-chr p25.3 Oncogene p25.3 Seq+ 82139 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHBDF2-BRIP1 RHBDF2 chr17 76487712 - BRIP1 chr17 61743134 - Exonic hg38 BLCA TCGA-K4-A3WU-01B 1 16 5'UTR-CDS Intra-chr q25.1 q23.2 Oncogene 82140 ChimerSeq TCGA FAWG TCGA_RNA-Seq FSTL4-SLC22A4 FSTL4 chr5 133567186 - SLC22A4 chr5 132343760 + Exonic hg38 BLCA TCGA-K4-A3WU-01B 3 4 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 82141 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOP3A-ZCCHC8 TOP3A chr17 18294703 - ZCCHC8 chr12 122492789 - Exonic hg38 BLCA TCGA-K4-A3WU-01B 3 4 5'UTR-5'UTR Inter-chr q24.31 Seq+ 82142 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST6GALNAC2-BRIP1 ST6GALNAC2 chr17 76578756 - BRIP1 chr17 61743134 - Exonic hg38 BLCA TCGA-K4-A3WU-01B 2 7 Out-of-frame Intra-chr q25.1 q23.2 Oncogene Seq+ 82143 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGXB3-PPARGC1B HMGXB3 chr5 150032603 + PPARGC1B chr5 149847458 + Exonic hg38 BLCA TCGA-K4-A3WU-01B 2 6 Out-of-frame Intra-chr q32 q32 Seq+ 82144 ChimerSeq TCGA FAWG TCGA_RNA-Seq JARID2-PPP1R10 JARID2 chr6 15374252 + PPP1R10 chr6 30616998 - Exonic hg38 BLCA TCGA-K4-A3WV-01A 25 136 5'UTR-5'UTR Intra-chr p22.3 Seq+ 82145 ChimerSeq TCGA FAWG TCGA_RNA-Seq CARMIL1-CTSW CARMIL1 chr6 25581439 + CTSW chr11 65881407 + Exonic hg38 BLCA TCGA-K4-A3WV-01A 5 27 Out-of-frame Inter-chr p22.2 q13.1 82146 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETMAR-SUMF1 SETMAR chr3 4303526 + SUMF1 chr3 4362254 - Exonic hg38 BLCA TCGA-K4-A3WV-01A 4 28 In-Frame Intra-chr p26.1 p26.1 Seq+ 82147 ChimerSeq TCGA FAWG TCGA_RNA-Seq GMDS-MRPS18B GMDS chr6 1726416 - MRPS18B chr6 30624883 + Exonic hg38 BLCA TCGA-K4-A3WV-01A 2 32 CDS-3'UTR Intra-chr p25.3 Seq+ 82148 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPF2-MSL1 WIPF2 chr17 40219492 + MSL1 chr17 40126183 + Exonic hg38 BLCA TCGA-K4-A3WV-01A 5 12 5'UTR-5'UTR Intra-chr q21.2 q21.1 Seq+ 82149 ChimerSeq TCGA FAWG TCGA_RNA-Seq C6orf48-CARMIL1 C6orf48 chr6 31837435 + CARMIL1 chr6 25420114 + Exonic hg38 BLCA TCGA-K4-A3WV-01A 4 14 Out-of-frame Intra-chr p22.2 82150 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHH1-GPHN PLEKHH1 chr14 67562035 + GPHN chr14 67058649 + Exonic hg38 BLCA TCGA-K4-A3WV-01A 4 12 In-Frame Intra-chr q24.1 q23.3 Seq+ 82151 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT6-CUL4B SEPT6 chrX 119629318 - CUL4B chrX 120574630 - Exonic hg38 BLCA TCGA-K4-A3WV-01A 2 6 Out-of-frame Intra-chr q24 q24 Seq+ 82152 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM162A-CASR FAM162A chr3 122384299 + CASR chr3 122253948 + Exonic hg38 BLCA TCGA-K4-A3WV-01A 1 7 CDS-5'UTR Intra-chr q21.1 q13.33 Seq+ 82153 ChimerSeq TCGA FAWG TCGA_RNA-Seq HERC2P9-TRPM1 HERC2P9 chr15 28590260 + TRPM1 chr15 31076984 - Exonic hg38 BLCA TCGA-K4-A4AB-01B 1 7 3'UTR-5'UTR Intra-chr q13.3 82154 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPN2-MAP2K3 EPN2 chr17 19237531 + MAP2K3 chr17 21298413 + Exonic hg38 BLCA TCGA-K4-A4AC-01A 18 63 5'UTR-5'UTR Intra-chr p11.2 p11.2 STE:STE7 Seq+ 82155 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13B-AS2 VPS13B chr8 99442635 + AS2 chr8 103133369 - Exonic hg38 BLCA TCGA-K4-A4AC-01A 13 72 Out-of-frame Intra-chr q22.2 82156 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC7A1-CDX2 SLC7A1 chr13 29553761 - CDX2 chr13 27965015 - Exonic hg38 BLCA TCGA-K4-A4AC-01A 12 73 5'UTR-CDS Intra-chr q12.3 q12.2 Tumor suppressor gene Transcription factor Seq+ 82157 ChimerSeq TCGA FAWG TCGA_RNA-Seq STXBP3-GPR61 STXBP3 chr1 108800305 + GPR61 chr1 109545311 + Exonic hg38 BLCA TCGA-K4-A4AC-01A 3 8 CDS-3'UTR Intra-chr p13.3 p13.3 Seq+ 82158 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFYVE26-RBM25 ZFYVE26 chr14 67815770 - RBM25 chr14 73088001 + Exonic hg38 BLCA TCGA-K4-A4AC-01A 1 2 Out-of-frame Intra-chr q24.1 q24.2 Seq+ 82159 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF2-S100A7 ARHGEF2 chr1 155978365 - S100A7 chr1 153459030 - Exonic hg38 BLCA TCGA-K4-A5RH-01A 149 850 CDS-5'UTR Intra-chr q22 q21.3 Seq+ 82160 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPRIP-TOM1L2 MPRIP chr17 17042971 + TOM1L2 chr17 17862848 - Exonic hg38 BLCA TCGA-K4-A5RH-01A 20 143 Out-of-frame Intra-chr p11.2 p11.2 Tumor suppressor gene Seq+ 82161 ChimerSeq TCGA FAWG TCGA_RNA-Seq COG6-DLEU1 COG6 chr13 39665154 + DLEU1 chr13 50492651 + Exonic hg38 BLCA TCGA-K4-A5RH-01A 15 42 5'UTR-5'UTR Intra-chr q14.11 q14.2 Tumor suppressor gene 82162 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH1L-PKLR ASH1L chr1 155562153 - PKLR chr1 155301416 - Exonic hg38 BLCA TCGA-K4-A5RH-01A 11 56 5'UTR-5'UTR Intra-chr q22 Transcription factor q22 Seq+ 82163 ChimerSeq TCGA FAWG TCGA_RNA-Seq SREBF1-MED9 SREBF1 chr17 17836727 - MED9 chr17 17491279 + Exonic hg38 BLCA TCGA-K4-A5RH-01A 9 31 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 82164 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPRIP-MED9 MPRIP chr17 17042971 + MED9 chr17 17491279 + Exonic hg38 BLCA TCGA-K4-A5RH-01A 5 19 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 82165 ChimerSeq TCGA FAWG TCGA_RNA-Seq PI4KA-TTC39C PI4KA chr22 20752903 - TTC39C chr18 24114554 + Exonic hg38 BLCA TCGA-K4-A5RH-01A 2 2 Out-of-frame Inter-chr q11.21 q11.2 Seq+ 82166 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNA12-ZC4H2 GNA12 chr7 2843853 - ZC4H2 chrX 64922243 - Exonic hg38 BLCA TCGA-K4-A5RH-01A 1 5 CDS-5'UTR Inter-chr p22.2 q11.2 82167 ChimerSeq TCGA FAWG TCGA_RNA-Seq RWDD2B-MX2 RWDD2B chr21 29019211 - MX2 chr21 41390565 + Exonic hg38 BLCA TCGA-K4-A5RI-01A 5 26 Out-of-frame Intra-chr q21.3 q22.3 Seq+ 82168 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIMS1-CCDC138 LIMS1 chr2 108534594 + CCDC138 chr2 108804889 + Exonic hg38 BLCA TCGA-K4-A5RJ-01A 5 22 Out-of-frame Intra-chr q12.3 q13 Seq+ 82169 ChimerSeq TCGA FAWG TCGA_RNA-Seq TACC1-RAB11FIP1 TACC1 chr8 38825368 + RAB11FIP1 chr8 37863113 - Exonic hg38 BLCA TCGA-K4-A6FZ-01A 4 5 In-Frame Intra-chr p11.22 p11.23 Seq+ 82170 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOOK3-BAALC HOOK3 chr8 42925629 + BAALC chr8 103212919 + Exonic hg38 BLCA TCGA-K4-A6MB-01A 18 148 Out-of-frame Intra-chr p11.21 Oncogene q22.3 Seq+ 82171 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF251-ARHGAP39 ZNF251 chr8 144753683 - ARHGAP39 chr8 144548489 - Exonic hg38 BLCA TCGA-K4-A6MB-01A 31 69 5'UTR-CDS Intra-chr Transcription factor q24.3 Seq+ 82172 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRID1-GLUD1 GRID1 chr10 86363941 - GLUD1 chr10 87076656 - Exonic hg38 BLCA TCGA-K4-A6MB-01A 10 32 In-Frame Intra-chr q23.2 q23.2 Seq+ 82173 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIEXF-TRAF3IP3 DIEXF chr1 209831043 + TRAF3IP3 chr1 209772948 + Exonic hg38 BLCA TCGA-K4-A6MB-01A 6 17 Out-of-frame Intra-chr q32.2 q32.2 Seq+ 82174 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF19A-NCALD RNF19A chr8 100309867 - NCALD chr8 101719648 - Exonic hg38 BLCA TCGA-K4-A6MB-01A 2 9 5'UTR-5'UTR Intra-chr q22.2 q22.3 Seq+ 82175 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRPK1-EHMT2 SRPK1 chr6 35888815 - EHMT2 chr6 31881092 - Exonic hg38 BLCA TCGA-K4-A6MB-01A 1 12 CDS-5'UTR Intra-chr p21.31 CMGC:SRPK 82176 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL48-ATG16L2 MRPL48 chr11 73787992 + ATG16L2 chr11 72816728 + Exonic hg38 BLCA TCGA-K4-A6MB-01A 1 4 Out-of-frame Intra-chr q13.4 q13.4 82177 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD46-LRRC4C ANKRD46 chr8 100559711 - LRRC4C chr11 41223008 - Exonic hg38 BLCA TCGA-K4-A6MB-01A 1 2 5'UTR-5'UTR Inter-chr q22.3 p12 82178 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2K5-C15orf61 MAP2K5 chr15 67600749 + C15orf61 chr15 67526418 + Exonic hg38 BLCA TCGA-K4-A83P-01A 3 17 Out-of-frame Intra-chr q23 STE:STE7 q23 Seq+ 82179 ChimerSeq TCGA FAWG TCGA_RNA-Seq JARID2-GMPR JARID2 chr6 15410365 + GMPR chr6 16274415 + Exonic hg38 BLCA TCGA-K4-A83P-01A 4 9 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 82180 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBF1-FBLN1 SBF1 chr22 50454512 - FBLN1 chr22 45542155 + Exonic hg38 BLCA TCGA-K4-A83P-01A 4 5 Out-of-frame Intra-chr q13.33 q13.31 Tumor suppressor gene Seq+ 82181 ChimerSeq TCGA FAWG TCGA_RNA-Seq LUC7L-CORIN LUC7L chr16 199062 - CORIN chr4 47665263 - Exonic hg38 BLCA TCGA-K4-A83P-01A 1 12 Out-of-frame Inter-chr p13.3 p12 Seq+ 82182 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2G1-TULP2 UBE2G1 chr17 4366271 - TULP2 chr19 48895162 - Exonic hg38 BLCA TCGA-K4-A83P-01A 1 6 In-Frame Inter-chr p13.2 q13.33 82183 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM118A-SBF1 FAM118A chr22 45336411 + SBF1 chr22 50456673 - Exonic hg38 BLCA TCGA-K4-A83P-01A 1 3 In-Frame Intra-chr q13.31 q13.33 82184 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOA1-ATP10D NOA1 chr4 56968384 - ATP10D chr4 47523012 + Exonic hg38 BLCA TCGA-K4-A83P-01A 1 3 Out-of-frame Intra-chr q12 p12 82185 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF570-ECH1 ZNF570 chr19 37476434 + ECH1 chr19 38831790 - Exonic hg38 BLCA TCGA-K4-AAQO-01A 5 40 CDS-5'UTR Intra-chr q13.12 Transcription factor Seq+ 82186 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNNM4-NEURL3 CNNM4 chr2 96762401 + NEURL3 chr2 96500924 - Exonic hg38 BLCA TCGA-K4-AAQO-01A 2 9 In-Frame Intra-chr q11.2 q11.2 Seq+ 82187 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMG7-COLGALT2 SMG7 chr1 183472649 + COLGALT2 chr1 183978520 - Exonic hg38 BLCA TCGA-K4-AAQO-01A 1 5 In-Frame Intra-chr q25.3 q25.3 82188 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARAP1-SLC22A8 ARAP1 chr11 72692753 - SLC22A8 chr11 63014962 - Exonic hg38 BLCA TCGA-KQ-A41O-01A 2 11 CDS-5'UTR Intra-chr q13.4 q12.3 Seq+ 82189 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAP1-NFYC CAP1 chr1 40040801 + NFYC chr1 40738836 + Exonic hg38 BLCA TCGA-KQ-A41P-01A 3 1 5'UTR-5'UTR Intra-chr p34.2 p34.2 Transcription factor Seq+ 82190 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEIL3-AGA NEIL3 chr4 177351549 + AGA chr4 177431808 - Exonic hg38 BLCA TCGA-KQ-A41P-01A 2 5 In-Frame Intra-chr q34.3 q34.3 Seq+ 82191 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD7-LRRN1 STARD7 chr2 96193242 - LRRN1 chr3 3844364 + Exonic hg38 BLCA TCGA-KQ-A41P-01A 1 4 CDS-5'UTR Inter-chr q11.2 p26.2 Seq+ 82192 ChimerSeq TCGA FAWG TCGA_RNA-Seq STXBP6-SLC44A4 STXBP6 chr14 24974665 - SLC44A4 chr6 31877082 - Exonic hg38 BLCA TCGA-KQ-A41Q-01A 8 12 CDS-5'UTR Inter-chr q12 Seq+ 82193 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAR2-AGMO FAR2 chr12 29321924 + AGMO chr7 15201359 - Exonic hg38 BLCA TCGA-KQ-A41Q-01A 5 22 In-Frame Inter-chr p11.22 p21.2 Seq+ 82194 ChimerSeq TCGA FAWG TCGA_RNA-Seq YWHAB-ISPD YWHAB chr20 44885886 + ISPD chr7 16376241 - Exonic hg38 BLCA TCGA-KQ-A41Q-01A 6 18 Out-of-frame Inter-chr q13.12 p21.2 Seq+ 82195 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTK2-VPS13B PTK2 chr8 140743230 - VPS13B chr8 99661354 + Exonic hg38 BLCA TCGA-KQ-A41Q-01A 6 8 In-Frame Intra-chr q24.3 q22.2 Seq+ 82196 ChimerSeq TCGA FAWG TCGA_RNA-Seq JARID2-CDKAL1 JARID2 chr6 15410365 + CDKAL1 chr6 20649293 + Exonic hg38 BLCA TCGA-KQ-A41R-01A 6 15 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 82197 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHRS4L2-RNF31 DHRS4L2 chr14 23995133 + RNF31 chr14 24157290 + Exonic hg38 BLCA TCGA-KQ-A41R-01A 2 4 3'UTR-3'UTR Intra-chr q11.2 q12 Seq+ 82198 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF788-RAD23A ZNF788 chr19 12092470 + RAD23A chr19 12952689 + Exonic hg38 BLCA TCGA-KQ-A41R-01A 2 4 Out-of-frame Intra-chr p13.2 Transcription factor p13.13 Seq+ 82199 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFAT5-FHOD3 NFAT5 chr16 69695379 + FHOD3 chr18 36709095 + Exonic hg38 BLCA TCGA-KQ-A41R-01A 1 3 3'UTR-CDS Inter-chr q22.1 Transcription factor q12.2 82200 ChimerSeq TCGA FAWG TCGA_RNA-Seq FKBP5-BYSL FKBP5 chr6 35688804 - BYSL chr6 41930132 + Exonic hg38 BLCA TCGA-KQ-A41S-01A 1 6 5'UTR-CDS Intra-chr p21.31 p21.1 Seq+ 82201 ChimerSeq TCGA FAWG TCGA_RNA-Seq FZD6-DPYS FZD6 chr8 103300284 + DPYS chr8 104392991 - Exonic hg38 BLCA TCGA-LC-A66R-01A 19 49 In-Frame Intra-chr q22.3 q22.3 Seq+ 82202 ChimerSeq TCGA FAWG TCGA_RNA-Seq YWHAE-RPH3AL YWHAE chr17 1400047 - RPH3AL chr17 327579 - Exonic hg38 BLCA TCGA-LC-A66R-01A 5 35 5'UTR-5'UTR Intra-chr p13.3 Seq+ 82203 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSU1-BAALC RSU1 chr10 16816973 - BAALC chr8 103212919 + Exonic hg38 BLCA TCGA-LC-A66R-01A 4 33 In-Frame Inter-chr p13 q22.3 Seq+ 82204 ChimerSeq TCGA FAWG TCGA_RNA-Seq MANBAL-UBR5 MANBAL chr20 37301413 + UBR5 chr8 102329399 - Exonic hg38 BLCA TCGA-LC-A66R-01A 1 11 In-Frame Inter-chr q11.23 q22.3 Oncogene Seq+ 82205 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK3-VSIG10 TAOK3 chr12 118199051 - VSIG10 chr12 118066694 - Exonic hg38 BLCA TCGA-LC-A66R-01A 2 4 Out-of-frame Intra-chr q24.23 q24.23 Seq+ 82206 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB8OS-BSDC1 ZBTB8OS chr1 32633645 - BSDC1 chr1 32384048 - Exonic hg38 BLCA TCGA-LC-A66R-01A 1 4 In-Frame Intra-chr p35.1 p35.1 82207 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCSER1-BMP2K CCSER1 chr4 90400129 + BMP2K chr4 78833582 + Exonic hg38 BLCA TCGA-LT-A5Z6-01A 4 17 Out-of-frame Intra-chr q22.1 q21.21 Seq+ 82208 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAM9-TESMIN ADAM9 chr8 39071403 + TESMIN chr11 68715939 - Exonic hg38 BLCA TCGA-LT-A8JT-01A 1 8 3'UTR-CDS Inter-chr q13.3 82209 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLE1-SPTAN1 GLE1 chr9 128515639 + SPTAN1 chr9 128624328 + Exonic hg38 BLCA TCGA-MV-A51V-01A 1 9 In-Frame Intra-chr q34.11 q34.11 82210 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT5B-CHKA KMT5B chr11 68213477 - CHKA chr11 68074830 - Exonic hg38 BLCA TCGA-MV-A51V-01A 2 3 5'UTR-5'UTR Intra-chr q13.2 q13.2 82211 ChimerSeq TCGA FAWG TCGA_RNA-Seq LYPLA1-ANO3 LYPLA1 chr8 54100908 - ANO3 chr11 26553249 + Exonic hg38 BLCA TCGA-MV-A51V-01A 1 6 In-Frame Inter-chr q11.23 p14.2 82212 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF9-MSI2 ARHGEF9 chrX 63655494 - MSI2 chr17 57401379 + Exonic hg38 BLCA TCGA-MV-A51V-01A 1 3 Out-of-frame Inter-chr q11.2 q22 82213 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP153-DTNBP1 NUP153 chr6 17646067 - DTNBP1 chr6 15524669 - Exonic hg38 BLCA TCGA-PQ-A6FI-01A 76 619 In-Frame Intra-chr p22.3 p22.3 Seq+ 82214 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLCN3-TDO2 CLCN3 chr4 169680207 + TDO2 chr4 155917395 + Exonic hg38 BLCA TCGA-PQ-A6FI-01A 11 24 CDS-3'UTR Intra-chr q33 q32.1 Seq+ 82215 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNPAT-CAPN9 GNPAT chr1 231251143 + CAPN9 chr1 230787522 + Exonic hg38 BLCA TCGA-PQ-A6FN-01A 13 44 In-Frame Intra-chr q42.2 q42.2 Seq+ 82216 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED15-TANGO2 MED15 chr22 20568631 + TANGO2 chr22 20036760 + Exonic hg38 BLCA TCGA-PQ-A6FN-01A 1 11 CDS-5'UTR Intra-chr q11.21 q11.21 82217 ChimerSeq TCGA FAWG TCGA_RNA-Seq UQCRC2-CYB5RL UQCRC2 chr16 21957566 + CYB5RL chr1 54179352 - Exonic hg38 BLCA TCGA-R3-A69X-01A 10 22 5'UTR-CDS Inter-chr p32.3 Seq+ 82218 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRN-ZC3H3 GRN chr17 44350800 + ZC3H3 chr8 143484947 - Exonic hg38 BLCA TCGA-S5-A6DX-01A 47 160 CDS-5'UTR Inter-chr q21.31 Seq+ 82219 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-LACRT FRS2 chr12 69470530 + LACRT chr12 54633233 - Exonic hg38 BLCA TCGA-S5-A6DX-01A 7 51 5'UTR-CDS Intra-chr q15 q13.2 Seq+ 82220 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASAP1-ADCY2 ASAP1 chr8 130214556 - ADCY2 chr5 7784365 + Exonic hg38 BLCA TCGA-S5-A6DX-01A 2 15 Out-of-frame Inter-chr q24.22 p15.31 Seq+ 82221 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCN1-MS4A4A TCN1 chr11 59854652 - MS4A4A chr11 60292225 + Exonic hg38 BLCA TCGA-S5-AA26-01A 3 14 In-Frame Intra-chr q12.1 q12.2 Seq+ 82222 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM35-CCNB1IP1 TRIM35 chr8 27298464 - CCNB1IP1 chr14 20329373 - Exonic hg38 BLCA TCGA-SY-A9G0-01A 1 13 CDS-5'UTR Inter-chr p21.2 Tumor suppressor gene q11.2 Seq+ 82223 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAF2-CACNA1B TRAF2 chr9 136900520 + CACNA1B chr9 138075819 + Exonic hg38 BLCA TCGA-SY-A9G0-01A 1 5 In-Frame Intra-chr q34.3 Tumor suppressor gene q34.3 Seq+ 82224 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL23-RNF157 METTL23 chr17 76733846 + RNF157 chr17 76163084 - Exonic hg38 BLCA TCGA-SY-A9G5-01A 37 78 Out-of-frame Intra-chr q25.1 q25.1 82225 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPI-HKR1 GPI chr19 34399631 + HKR1 chr19 37369179 + Exonic hg38 BLCA TCGA-SY-A9G5-01A 26 106 Out-of-frame Intra-chr q13.12 Transcription factor 82226 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC2-OOEP EXOC2 chr6 693019 - OOEP chr6 73394488 - Exonic hg38 BLCA TCGA-SY-A9G5-01A 7 62 5'UTR-5'UTR Intra-chr p25.3 q13 Seq+ 82227 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF8-HFE TAF8 chr6 42066459 + HFE chr6 26090841 + Exonic hg38 BLCA TCGA-SY-A9G5-01A 5 13 In-Frame Intra-chr p21.1 p22.2 Seq+ 82228 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM120A-RCC1L TMEM120A chr7 75994490 - RCC1L chr7 75043109 - Exonic hg38 BLCA TCGA-SY-A9G5-01A 1 11 In-Frame Intra-chr q11.23 q11.23 82229 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGCR8-COMT DGCR8 chr22 20080383 + COMT chr22 19962527 + Exonic hg38 BLCA TCGA-UY-A78K-01A 12 82 5'UTR-5'UTR Intra-chr q11.21 q11.21 Seq+ 82230 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRD4-PGLYRP2 BRD4 chr19 15332290 - PGLYRP2 chr19 15469929 - Exonic hg38 BLCA TCGA-UY-A78K-01A 15 6 5'UTR-CDS Intra-chr p13.12 Atypical:BRD p13.12 82231 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKRN2-PPARG MKRN2 chr3 12557176 + PPARG chr3 12312380 + Exonic hg38 BLCA TCGA-UY-A78K-01A 5 25 CDS-5'UTR Intra-chr p25.2 p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 82232 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNIP1-ACSL6 FNIP1 chr5 131744564 - ACSL6 chr5 131962678 - Exonic hg38 BLCA TCGA-UY-A78K-01A 4 17 In-Frame Intra-chr q31.1 q31.1 Seq+ 82233 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARPC1A-TH ARPC1A chr7 99344515 + TH chr11 2169871 - Exonic hg38 BLCA TCGA-UY-A78K-01A 2 16 Out-of-frame Inter-chr q22.1 p15.5 Seq+ 82234 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBCB-PRX TBCB chr19 36119298 + PRX chr19 40396475 - Exonic hg38 BLCA TCGA-UY-A78K-01A 3 5 Out-of-frame Intra-chr q13.12 q13.2 Seq+ 82235 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K1-OR4N2 MAP3K1 chr5 56859915 + OR4N2 chr14 19733369 + Exonic hg38 BLCA TCGA-UY-A78K-01A 2 6 CDS-5'UTR Inter-chr q11.2 STE:STE11 Oncogene q11.2 Seq+ 82236 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOK-HSP90AA1 MOK chr14 102283478 - HSP90AA1 chr14 102102082 - Exonic hg38 BLCA TCGA-UY-A78K-01A 1 3 In-Frame Intra-chr q32.31 CMGC:RCK q32.31 Oncogene 82237 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF41-MSRB3 RNF41 chr12 56213958 - MSRB3 chr12 65308529 + Exonic hg38 BLCA TCGA-UY-A78L-01A 3 6 5'UTR-5'UTR Intra-chr q13.3 q14.3 Seq+ 82238 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF169-POLD3 RNF169 chr11 74817714 + POLD3 chr11 74668777 + Exonic hg38 BLCA TCGA-UY-A78L-01A 1 5 CDS-3'UTR Intra-chr q13.4 q13.4 Seq+ 82239 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBR5-ODF1 UBR5 chr8 102412173 - ODF1 chr8 102560452 + Exonic hg38 BLCA TCGA-UY-A78M-01A 67 129 In-Frame Intra-chr q22.3 Oncogene q22.3 Seq+ 82240 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBR5-1980E6.3 UBR5 chr8 102412173 - 1980E6.3 chr8 102529311 + Exonic hg38 BLCA TCGA-UY-A78M-01A 13 23 Out-of-frame Intra-chr q22.3 Oncogene 82241 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMG1P5-DOC2A SMG1P5 chr16 30305055 - DOC2A chr16 30015262 - Exonic hg38 BLCA TCGA-UY-A78M-01A 1 18 3'UTR-5'UTR Intra-chr p11.2 p11.2 82242 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM120B-ORAI1 TMEM120B chr12 121712964 + ORAI1 chr12 121641041 + Exonic hg38 BLCA TCGA-UY-A78M-01A 1 18 CDS-3'UTR Intra-chr q24.31 q24.31 Seq+ 82243 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLPP1-MCIDAS PLPP1 chr5 55534572 - MCIDAS chr5 55223023 - Exonic hg38 BLCA TCGA-UY-A78M-01A 2 2 Out-of-frame Intra-chr q11.2 q11.2 82244 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1A-ZDHHC18 ARID1A chr1 26696100 + ZDHHC18 chr1 26832447 + Exonic hg38 BLCA TCGA-UY-A78M-01A 1 4 5'UTR-CDS Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 82245 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMG1-DOC2A SMG1 chr16 18896052 - DOC2A chr16 30015262 - Exonic hg38 BLCA TCGA-UY-A78M-01A 1000 1000 CDS-5'UTR Intra-chr p12.3 Atypical:PIKK p11.2 82246 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRUNE1-LCE2A PRUNE1 chr1 151017904 + LCE2A chr1 152698882 + Exonic hg38 BLCA TCGA-UY-A78N-01A 25 119 5'UTR-5'UTR Intra-chr q21.3 q21.3 82247 ChimerSeq TCGA FAWG TCGA_RNA-Seq KBTBD6-TEX29 KBTBD6 chr13 41132702 - TEX29 chr13 111316185 + Exonic hg38 BLCA TCGA-UY-A78N-01A 24 60 5'UTR-5'UTR Intra-chr q14.11 q34 82248 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE4B-CENPS UBE4B chr1 10033694 + CENPS chr1 10440347 + Exonic hg38 BLCA TCGA-UY-A78N-01A 18 69 Out-of-frame Intra-chr p36.22 Tumor suppressor gene p36.22 Tumor suppressor gene Transcription factor 82249 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYCBP2-CPB2 MYCBP2 chr13 77288161 - CPB2 chr13 46064741 - Exonic hg38 BLCA TCGA-UY-A78N-01A 13 25 In-Frame Intra-chr q22.3 q14.13 Seq+ 82250 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITCH-ARFGAP1 ITCH chr20 34481206 + ARFGAP1 chr20 63282819 + Exonic hg38 BLCA TCGA-UY-A78N-01A 10 33 Out-of-frame Intra-chr q11.22 q13.33 Seq+ 82251 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE4B-CORT UBE4B chr1 10033694 + CORT chr1 10451377 + Exonic hg38 BLCA TCGA-UY-A78N-01A 5 9 CDS-3'UTR Intra-chr p36.22 Tumor suppressor gene p36.22 Seq+ 82252 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAF1-CHIA FAF1 chr1 50655442 - CHIA chr1 111314540 + Exonic hg38 BLCA TCGA-UY-A78N-01A 4 12 Out-of-frame Intra-chr p32.3 p13.2 Seq+ 82253 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGCR2-SERINC2 DGCR2 chr22 19063202 - SERINC2 chr1 31432967 + Exonic hg38 BLCA TCGA-UY-A78N-01A 2 5 Out-of-frame Inter-chr q11.21 p35.2 Seq+ 82254 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS15-CCDC18 EPS15 chr1 51468473 - CCDC18 chr1 93214746 + Exonic hg38 BLCA TCGA-UY-A78N-01A 1 9 Out-of-frame Intra-chr p32.3 p22.1 Seq+ 82255 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRUNE1-LCE4A PRUNE1 chr1 151017904 + LCE4A chr1 152708160 + Exonic hg38 BLCA TCGA-UY-A78N-01A 1000 1000 5'UTR-5'UTR Intra-chr q21.3 q21.3 82256 ChimerSeq TCGA FAWG TCGA_RNA-Seq NECTIN2-IGSF23 NECTIN2 chr19 44865660 + IGSF23 chr19 44635401 + Exonic hg38 BLCA TCGA-UY-A8OB-01A 14 100 Out-of-frame Intra-chr q13.32 q13.31 82257 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCA7-STK11 ABCA7 chr19 1047654 + STK11 chr19 1189409 + Exonic hg38 BLCA TCGA-UY-A8OB-01A 3 17 CDS-5'UTR Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene 82258 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM28-ZBTB45 TRIM28 chr19 58548592 + ZBTB45 chr19 58517673 - Exonic hg38 BLCA TCGA-UY-A8OB-01A 1 7 CDS-5'UTR Intra-chr q13.43 q13.43 Transcription factor Seq+ 82259 ChimerSeq TCGA FAWG TCGA_RNA-Seq RB1-CDADC1 RB1 chr13 48304049 + CDADC1 chr13 49286222 + Exonic hg38 BLCA TCGA-UY-A8OB-01A 1 4 Out-of-frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 82260 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPSNAP1-NF2 NIPSNAP1 chr22 29558870 - NF2 chr22 29636751 + Exonic hg38 BLCA TCGA-UY-A8OB-01A 1 2 Out-of-frame Intra-chr q12.2 q12.2 Oncogene Tumor suppressor gene 82261 ChimerSeq TCGA FAWG TCGA_RNA-Seq HGSNAT-FUT10 HGSNAT chr8 43182260 + FUT10 chr8 33372804 - Exonic hg38 BLCA TCGA-UY-A8OC-01A 27 118 In-Frame Intra-chr p11.21 p12 Seq+ 82262 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNB1-FAAP20 GNB1 chr1 1890820 - FAAP20 chr1 2185513 - Exonic hg38 BLCA TCGA-UY-A9PB-01A 2 6 5'UTR-CDS Intra-chr p36.33 p36.33 82263 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREBBP-ADCY9 CREBBP chr16 3879832 - ADCY9 chr16 3966966 - Exonic hg38 BLCA TCGA-UY-A9PB-01A 1 9 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 82264 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARNTL2-CCDC91 ARNTL2 chr12 27368412 + CCDC91 chr12 28225795 + Exonic hg38 BLCA TCGA-UY-A9PB-01A 1 6 CDS-5'UTR Intra-chr p11.23 Transcription factor p11.22 82265 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX58-RBMS1 DDX58 chr9 32466290 - RBMS1 chr2 160278658 - Exonic hg38 BLCA TCGA-UY-A9PB-01A 1 1 In-Frame Inter-chr p21.1 Tumor suppressor gene q24.2 82266 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLFN11-CCL14 SLFN11 chr17 35366947 - CCL14 chr17 35983888 - Exonic hg38 BLCA TCGA-UY-A9PD-01A 17 155 5'UTR-5'UTR Intra-chr q12 q12 Seq+ 82267 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPSB3-IFT140 SPSB3 chr16 1781358 - IFT140 chr16 1511150 - Exonic hg38 BLCA TCGA-UY-A9PD-01A 13 59 In-Frame Intra-chr p13.3 p13.3 Seq+ 82268 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX8-FMO5 DHX8 chr17 43484185 + FMO5 chr1 147190249 - Exonic hg38 BLCA TCGA-UY-A9PD-01A 7 38 In-Frame Inter-chr q21.31 q21.1 Seq+ 82269 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK12-TAF15 CDK12 chr17 39526316 + TAF15 chr17 35842367 + Exonic hg38 BLCA TCGA-UY-A9PD-01A 4 32 CDS-3'UTR Intra-chr q12 Oncogene q12 Seq+ 82270 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD11-DPRX PSMD11 chr17 32454619 + DPRX chr19 53634531 + Exonic hg38 BLCA TCGA-UY-A9PD-01A 3 23 Out-of-frame Inter-chr q11.2 q13.42 Transcription factor Seq+ 82271 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKAL1-WFDC21P CDKAL1 chr6 20548705 + WFDC21P chr17 60088301 - Exonic hg38 BLCA TCGA-UY-A9PD-01A 2 5 CDS-3'UTR Inter-chr p22.3 q23.1 82272 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPIF-SNX31 PPIF chr10 79351583 + SNX31 chr8 100636011 - Exonic hg38 BLCA TCGA-UY-A9PE-01A 10 52 Out-of-frame Inter-chr q22.3 q22.3 Seq+ 82273 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCB1-SNW1 SMARCB1 chr22 23787262 + SNW1 chr14 77735012 - Exonic hg38 BLCA TCGA-UY-A9PE-01A 4 15 3'UTR-CDS Inter-chr q11.23 Oncogene Tumor suppressor gene q24.3 Seq+ 82274 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL2-KIF9 FBXL2 chr3 33297962 + KIF9 chr3 47257560 - Exonic hg38 BLCA TCGA-UY-A9PE-01A 2 7 Out-of-frame Intra-chr p22.3 p21.31 Seq+ 82275 ChimerSeq TCGA FAWG TCGA_RNA-Seq CERS6-PSMD14 CERS6 chr2 168717978 + PSMD14 chr2 161367478 + Exonic hg38 BLCA TCGA-UY-A9PE-01A 2 3 Out-of-frame Intra-chr q24.3 q24.2 Seq+ 82276 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP350-TOR1AIP1 CEP350 chr1 179997175 + TOR1AIP1 chr1 179900126 + Exonic hg38 BLCA TCGA-UY-A9PE-01A 1 4 In-Frame Intra-chr q25.2 q25.2 Seq+ 82277 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLU-MYH9 CLU chr8 27606354 - MYH9 chr22 36327488 - Exonic hg38 BLCA TCGA-UY-A9PE-01A 1 4 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q12.3 Oncogene Tumor suppressor gene 82278 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAK1-PPIL2 TRAK1 chr3 42014117 + PPIL2 chr22 21686483 + Exonic hg38 BLCA TCGA-UY-A9PE-01A 1 3 5'UTR-CDS Inter-chr p22.1 q11.21 82279 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-SHANK2 PPFIA1 chr11 70272436 + SHANK2 chr11 70820682 - Exonic hg38 BLCA TCGA-UY-A9PH-01A 9 20 Out-of-frame Intra-chr q13.3 q13.4 Seq+ 82280 ChimerSeq TCGA FAWG TCGA_RNA-Seq LETMD1-LARP4 LETMD1 chr12 51052207 + LARP4 chr12 50453460 + Exonic hg38 BLCA TCGA-UY-A9PH-01A 1 6 In-Frame Intra-chr q13.12 q13.12 Seq+ 82281 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPC4AP-ZNF430 TRPC4AP chr20 35003410 - ZNF430 chr19 21056631 + Exonic hg38 BLCA TCGA-UY-A9PH-01A 1 2 Out-of-frame Inter-chr q11.22 Transcription factor 82282 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNRG-SHC2 SYNRG chr17 37585325 - SHC2 chr19 425231 - Exonic hg38 BLCA TCGA-XF-A8HC-01A 5 19 5'UTR-CDS Inter-chr p13.3 Seq+ 82283 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHISA5-UQCRC1 SHISA5 chr3 48501137 - UQCRC1 chr3 48610005 - Exonic hg38 BLCA TCGA-XF-A8HC-01A 4 21 CDS-5'UTR Intra-chr p21.31 p21.31 82284 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP192-LDLRAD4 CEP192 chr18 13019206 + LDLRAD4 chr18 13278105 + Exonic hg38 BLCA TCGA-XF-A8HC-01A 1 3 CDS-5'UTR Intra-chr p11.21 p11.21 82285 ChimerSeq TCGA FAWG TCGA_RNA-Seq VGLL4-UPF2 VGLL4 chr3 11702971 - UPF2 chr10 11979165 - Exonic hg38 BLCA TCGA-XF-A8HD-01A 101 390 Out-of-frame Inter-chr p25.2 p14 Seq+ 82286 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD26-MCM10 ANKRD26 chr10 27100085 - MCM10 chr10 13209091 + Exonic hg38 BLCA TCGA-XF-A8HD-01A 6 24 In-Frame Intra-chr p12.1 p13 Seq+ 82287 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L1-ATP9A EPB41L1 chr20 36125527 + ATP9A chr20 51729978 - Exonic hg38 BLCA TCGA-XF-A8HD-01A 3 19 Out-of-frame Intra-chr q11.23 q13.2 Seq+ 82288 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM208B-AKR1E2 FAM208B chr10 5685175 + AKR1E2 chr10 4830675 + Exonic hg38 BLCA TCGA-XF-A8HD-01A 4 5 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 82289 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEBL-CAMK1D NEBL chr10 21172383 - CAMK1D chr10 12553225 + Exonic hg38 BLCA TCGA-XF-A8HD-01A 3 5 In-Frame Intra-chr p12.31 p13 Seq+ 82290 ChimerSeq TCGA FAWG TCGA_RNA-Seq NET1-USP6NL NET1 chr10 5429229 + USP6NL chr10 11527567 - Exonic hg38 BLCA TCGA-XF-A8HD-01A 1 4 Out-of-frame Intra-chr p15.1 p14 82291 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNDC3B-CLDN11 FNDC3B chr3 172251541 + CLDN11 chr3 170708044 + Exonic hg38 BLCA TCGA-XF-A8HF-01A 1 10 CDS-3'UTR Intra-chr q26.31 q26.2 82292 ChimerSeq TCGA FAWG TCGA_RNA-Seq NLN-MAST4 NLN chr5 65792601 + MAST4 chr5 66759709 + Exonic hg38 BLCA TCGA-XF-A8HF-01A 1 8 In-Frame Intra-chr q12.3 q12.3 AGC:MAST 82293 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSC22D1-TPT1 TSC22D1 chr13 44577057 - TPT1 chr13 45340184 - Exonic hg38 BLCA TCGA-XF-A8HF-01A 1 1 5'UTR-5'UTR Intra-chr q14.11 Tumor suppressor gene Transcription factor q14.13 82294 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGAPA2-C20orf194 RALGAPA2 chr20 20653530 - C20orf194 chr20 3270562 - Exonic hg38 BLCA TCGA-XF-A8HG-01A 15 67 In-Frame Intra-chr p11.23 p13 Seq+ 82295 ChimerSeq TCGA FAWG TCGA_RNA-Seq C20orf194-EIF2S2 C20orf194 chr20 3250161 - EIF2S2 chr20 34092879 - Exonic hg38 BLCA TCGA-XF-A8HG-01A 10 24 Out-of-frame Intra-chr p13 q11.22 Seq+ 82296 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF6-BANF2 EIF6 chr20 35279566 - BANF2 chr20 17735665 + Exonic hg38 BLCA TCGA-XF-A8HG-01A 3 20 Out-of-frame Intra-chr q11.22 p12.1 Seq+ 82297 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCGF3-SPATA24 PCGF3 chr4 705970 + SPATA24 chr5 139402693 - Exonic hg38 BLCA TCGA-XF-A8HG-01A 5 7 5'UTR-CDS Inter-chr p16.3 q31.2 Seq+ 82298 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP250-NINL CEP250 chr20 35480145 + NINL chr20 25470095 - Exonic hg38 BLCA TCGA-XF-A8HG-01A 2 4 Out-of-frame Intra-chr q11.22 p11.21 Seq+ 82299 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD46-NCALD ANKRD46 chr8 100559711 - NCALD chr8 101692896 - Exonic hg38 BLCA TCGA-XF-A8HH-01A 19 13 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 82300 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPO1-C2orf74 XPO1 chr2 61522611 - C2orf74 chr2 61157862 + Exonic hg38 BLCA TCGA-XF-A8HH-01A 4 25 CDS-5'UTR Intra-chr p15 Oncogene p15 Seq+ 82301 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERVK13-PRSS27 ERVK13 chr16 2669411 - PRSS27 chr16 2712814 - Exonic hg38 BLCA TCGA-XF-A8HH-01A 1 6 Out-of-frame Intra-chr p13.3 82302 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT2-ZDHHC17 CNOT2 chr12 70278274 + ZDHHC17 chr12 76826908 + Exonic hg38 BLCA TCGA-XF-A9SH-01A 2 17 In-Frame Intra-chr q15 q21.2 Seq+ 82303 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPS2-YEATS4 CAPS2 chr12 75390838 - YEATS4 chr12 69390147 + Exonic hg38 BLCA TCGA-XF-A9SH-01A 1 4 Out-of-frame Intra-chr q21.2 q15 82304 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF713-NELFB ZNF713 chr7 55912723 + NELFB chr9 137272081 + Exonic hg38 BLCA TCGA-XF-A9SK-01A 3 13 Out-of-frame Inter-chr p11.2 Transcription factor q34.3 Seq+ 82305 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB7-CD300E GRB7 chr17 39744984 + CD300E chr17 74614033 - Exonic hg38 BLCA TCGA-XF-A9SK-01A 2 4 Out-of-frame Intra-chr q12 q25.1 Seq+ 82306 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROBO1-ADGRL3 ROBO1 chr3 78685746 - ADGRL3 chr4 61813809 + Exonic hg38 BLCA TCGA-XF-A9SK-01A 2 4 In-Frame Inter-chr p12.3 Tumor suppressor gene q13.1 Oncogene 82307 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIEZO1-PMFBP1 PIEZO1 chr16 88784901 - PMFBP1 chr16 72120089 - Exonic hg38 BLCA TCGA-XF-A9SK-01A 1 4 Out-of-frame Intra-chr q24.3 q22.2 82308 ChimerSeq TCGA FAWG TCGA_RNA-Seq HUWE1-BICD1 HUWE1 chrX 53624595 - BICD1 chr12 32367670 + Exonic hg38 BLCA TCGA-XF-A9SM-01A 4 22 In-Frame Inter-chr p11.22 p11.21 Seq+ 82309 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABR-ACAD10 ABR chr17 1179667 - ACAD10 chr12 111753772 + Exonic hg38 BLCA TCGA-XF-A9SP-01A 4 3 5'UTR-CDS Inter-chr p13.3 q24.12 Seq+ 82310 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAB2-UST TAB2 chr6 149379518 + UST chr6 149073833 + Exonic hg38 BLCA TCGA-XF-A9SP-01A 2 3 In-Frame Intra-chr q25.1 q25.1 Seq+ 82311 ChimerSeq TCGA FAWG TCGA_RNA-Seq LARP1B-ABHD18 LARP1B chr4 128091512 + ABHD18 chr4 128035762 + Exonic hg38 BLCA TCGA-XF-A9SP-01A 1 5 In-Frame Intra-chr q28.2 q28.2 82312 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND4C-ACER2 DENND4C chr9 19360488 + ACER2 chr9 19423861 + Exonic hg38 BLCA TCGA-XF-A9SP-01A 1000 1000 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 82313 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEAD1-CD47 TEAD1 chr11 12675561 + CD47 chr3 108060852 - Exonic hg38 BLCA TCGA-XF-A9ST-01A 42 99 5'UTR-CDS Inter-chr p15.3 Transcription factor q13.12 Seq+ 82314 ChimerSeq TCGA FAWG TCGA_RNA-Seq UQCRC1-PRKAR2A UQCRC1 chr3 48600063 - PRKAR2A chr3 48747940 - Exonic hg38 BLCA TCGA-XF-A9ST-01A 7 79 CDS-3'UTR Intra-chr p21.31 p21.31 Seq+ 82315 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMG1P3-RBM14 SMG1P3 chr16 21519828 - RBM14 chr11 66624214 + Exonic hg38 BLCA TCGA-XF-A9ST-01A 12 17 3'UTR-CDS Inter-chr p12.2 q13.2 Tumor suppressor gene 82316 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARMC8-CACNA2D2 ARMC8 chr3 138289120 + CACNA2D2 chr3 50476199 - Exonic hg38 BLCA TCGA-XF-A9ST-01A 2 8 Out-of-frame Intra-chr q22.3 p21.31 Seq+ 82317 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM222B-FLOT2 FAM222B chr17 28842682 - FLOT2 chr17 28889026 - Exonic hg38 BLCA TCGA-XF-A9ST-01A 2 4 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 82318 ChimerSeq TCGA FAWG TCGA_RNA-Seq TYMS-GNAS TYMS chr18 662320 + GNAS chr20 58895612 + Exonic hg38 BLCA TCGA-XF-A9ST-01A 1 1 In-Frame Inter-chr p11.32 q13.32 Oncogene 82319 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA3-TRIM80P ITGA3 chr17 50074534 + TRIM80P chr17 75074604 + Exonic hg38 BLCA TCGA-XF-A9SU-01A 28 63 Out-of-frame Intra-chr q21.33 q25.1 82320 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM87B-MERTK TMEM87B chr2 112077282 + MERTK chr2 112008383 + Exonic hg38 BLCA TCGA-XF-A9SU-01A 7 22 In-Frame Intra-chr q13 q13 Seq+ 82321 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRBF2-REEP3 NRBF2 chr10 63133500 + REEP3 chr10 63594778 + Exonic hg38 BLCA TCGA-XF-A9SU-01A 3 15 In-Frame Intra-chr q21.3 q21.3 Seq+ 82322 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNRNP70-CDC42EP5 SNRNP70 chr19 49086561 + CDC42EP5 chr19 54471685 - Exonic hg38 BLCA TCGA-XF-A9SV-01A 16 118 CDS-5'UTR Intra-chr q13.33 Seq+ 82323 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAM17-ORAOV1 ADAM17 chr2 9535834 - ORAOV1 chr11 69656652 - Exonic hg38 BLCA TCGA-XF-A9SV-01A 13 46 Out-of-frame Inter-chr p25.1 q13.3 Seq+ 82324 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP4F12-MYO9B CYP4F12 chr19 15697070 + MYO9B chr19 17202139 + Exonic hg38 BLCA TCGA-XF-A9SV-01A 5 3 Out-of-frame Intra-chr p13.12 p13.11 82325 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBOAT2-TPCN2 MBOAT2 chr2 9003540 - TPCN2 chr11 69135435 + Exonic hg38 BLCA TCGA-XF-A9SV-01A 1 2 3'UTR-3'UTR Inter-chr p25.1 q13.3 82326 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAP3-TIPRL DAP3 chr1 155709824 + TIPRL chr1 168191369 + Exonic hg38 BLCA TCGA-XF-A9SY-01A 5 48 In-Frame Intra-chr q22 q24.2 Seq+ 82327 ChimerSeq TCGA FAWG TCGA_RNA-Seq NR6A1-DEAF1 NR6A1 chr9 124771020 - DEAF1 chr11 654051 - Exonic hg38 BLCA TCGA-XF-A9SY-01A 2 9 CDS-5'UTR Inter-chr q33.3 Transcription factor Transcription factor Seq+ 82328 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDLRAP1-TMEM57 LDLRAP1 chr1 25543786 + TMEM57 chr1 25498264 + Exonic hg38 BLCA TCGA-XF-A9SZ-01A 8 50 Out-of-frame Intra-chr p36.11 p36.11 Seq+ 82329 ChimerSeq TCGA FAWG TCGA_RNA-Seq EP400-TMPRSS12 EP400 chr12 131950036 + TMPRSS12 chr12 50843842 + Exonic hg38 BLCA TCGA-XF-A9SZ-01A 4 14 5'UTR-CDS Intra-chr q24.33 Oncogene q13.12 Seq+ 82330 ChimerSeq TCGA FAWG TCGA_RNA-Seq CFDP1-WWOX CFDP1 chr16 75395090 - WWOX chr16 79211608 + Exonic hg38 BLCA TCGA-XF-A9T0-01A 50 113 Out-of-frame Intra-chr q23.1 q23.1 Tumor suppressor gene Seq+ 82331 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHR-TSPAN13 AHR chr7 17299329 + TSPAN13 chr7 16776211 + Exonic hg38 BLCA TCGA-XF-A9T0-01A 33 89 Out-of-frame Intra-chr p21.1 Tumor suppressor gene Transcription factor p21.1 Tumor suppressor gene Seq+ 82332 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D14-GRPEL1 TBC1D14 chr4 6924111 + GRPEL1 chr4 7064223 - Exonic hg38 BLCA TCGA-XF-A9T0-01A 1 5 In-Frame Intra-chr p16.1 p16.1 82333 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLGA3-RTN2 GOLGA3 chr12 132776634 - RTN2 chr19 45495139 - Exonic hg38 BLCA TCGA-XF-A9T3-01A 2 2 Out-of-frame Inter-chr q24.33 q13.32 Seq+ 82334 ChimerSeq TCGA FAWG TCGA_RNA-Seq GON4L-ARHGEF2 GON4L chr1 155853276 - ARHGEF2 chr1 155952828 - Exonic hg38 BLCA TCGA-XF-A9T3-01A 1 3 In-Frame Intra-chr q22 q22 Seq+ 82335 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZCCHC7-TEK ZCCHC7 chr9 37126942 + TEK chr9 27197315 + Exonic hg38 BLCA TCGA-XF-A9T4-01A 4 60 In-Frame Intra-chr p13.2 p21.2 Seq+ 82336 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPT1A-GAL3ST3 CPT1A chr11 68841775 - GAL3ST3 chr11 66049149 - Exonic hg38 BLCA TCGA-XF-A9T4-01A 12 12 5'UTR-5'UTR Intra-chr q13.3 q13.1 Seq+ 82337 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHB-FAM219A SHB chr9 38016011 - FAM219A chr9 34405964 - Exonic hg38 BLCA TCGA-XF-A9T4-01A 1 18 Out-of-frame Intra-chr p13.1 p13.3 82338 ChimerSeq TCGA FAWG TCGA_RNA-Seq MELK-DCTN3 MELK chr9 36573007 + DCTN3 chr9 34618760 - Exonic hg38 BLCA TCGA-XF-A9T4-01A 2 8 5'UTR-CDS Intra-chr p13.2 CAMK:CAMKL p13.3 Seq+ 82339 ChimerSeq TCGA FAWG TCGA_RNA-Seq LINGO2-DCTN3 LINGO2 chr9 28295208 - DCTN3 chr9 34618760 - Exonic hg38 BLCA TCGA-XF-A9T4-01A 1 3 5'UTR-CDS Intra-chr p21.1 p13.3 82340 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCM9-IGKJ1 MCM9 chr6 118917569 - IGKJ1 chr2 88861923 - Exonic hg38 BLCA TCGA-XF-A9T5-01A 12 0 Out-of-frame Inter-chr q22.31 Tumor suppressor gene p11.2 Seq+ 82341 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSGIN2-DECR1 OSGIN2 chr8 89921171 + DECR1 chr8 90042728 + Exonic hg38 BLCA TCGA-XF-A9T5-01A 2 6 In-Frame Intra-chr q21.3 q21.3 82342 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRCC-RHBG PRCC chr1 156768239 + RHBG chr1 156382748 + Exonic hg38 BLCA TCGA-XF-A9T5-01A 1 1 Out-of-frame Intra-chr q23.1 q22 Seq+ 82343 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASAL2-ANKRD45 RASAL2 chr1 178390206 + ANKRD45 chr1 173659433 - Exonic hg38 BLCA TCGA-XF-A9T8-01A 3 8 CDS-5'UTR Intra-chr q25.2 Tumor suppressor gene q25.1 Seq+ 82344 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP2B-GORAB SRGAP2B chr1 144995008 - GORAB chr1 170539210 + Exonic hg38 BLCA TCGA-XF-A9T8-01A 2 2 Out-of-frame Intra-chr q21.1 q24.2 Tumor suppressor gene 82345 ChimerSeq TCGA FAWG TCGA_RNA-Seq VEGFA-HIST1H4H VEGFA chr6 43778918 + HIST1H4H chr6 26281587 - Exonic hg38 BLCA TCGA-XF-AAMG-01A 21 150 CDS-3'UTR Intra-chr p21.1 Tumor suppressor gene p22.2 Seq+ 82346 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN13-BZW2 TSPAN13 chr7 16754030 + BZW2 chr7 16694834 + Exonic hg38 BLCA TCGA-XF-AAMG-01A 29 47 In-Frame Intra-chr p21.1 Tumor suppressor gene p21.1 Seq+ 82347 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR48-HERC2 WDR48 chr3 39052073 + HERC2 chr15 28152830 - Exonic hg38 BLCA TCGA-XF-AAMG-01A 14 7 5'UTR-5'UTR Inter-chr p22.2 Tumor suppressor gene Seq+ 82348 ChimerSeq TCGA FAWG TCGA_RNA-Seq IRAK2-CDKAL1 IRAK2 chr3 10200515 + CDKAL1 chr6 20846075 + Exonic hg38 BLCA TCGA-XF-AAMG-01A 2 10 Out-of-frame Inter-chr p25.3 TKL:IRAK p22.3 82349 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM2-RFX2 DNM2 chr19 10805967 + RFX2 chr19 5997213 - Exonic hg38 BLCA TCGA-XF-AAMJ-01A 1 32 Out-of-frame Intra-chr p13.2 p13.3 Transcription factor Seq+ 82350 ChimerSeq TCGA FAWG TCGA_RNA-Seq LARGE1-KCNJ4 LARGE1 chr22 33604435 - KCNJ4 chr22 38428171 - Exonic hg38 BLCA TCGA-XF-AAMJ-01A 1 2 CDS-5'UTR Intra-chr q12.3 q13.1 82351 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKRN2-PPARG MKRN2 chr3 12557176 + PPARG chr3 12312380 + Exonic hg38 BLCA TCGA-XF-AAML-01A 4 25 CDS-5'UTR Intra-chr p25.2 p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 82352 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS72-GABPB2 VPS72 chr1 151178001 - GABPB2 chr1 151088190 + Exonic hg38 BLCA TCGA-XF-AAML-01A 4 15 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 82353 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPME1-KANK1 PPME1 chr11 74171522 + KANK1 chr9 676890 + Exonic hg38 BLCA TCGA-XF-AAML-01A 3 6 CDS-5'UTR Inter-chr q13.4 p24.3 Tumor suppressor gene Seq+ 82354 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP7-SMARCA2 USP7 chr16 8963207 - SMARCA2 chr9 2161686 + Exonic hg38 BLCA TCGA-XF-AAML-01A 2 10 Out-of-frame Inter-chr p13.2 p24.3 Tumor suppressor gene Seq+ 82355 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP5-RBFOX1 LRP5 chr11 68357847 + RBFOX1 chr16 6654603 + Exonic hg38 BLCA TCGA-XF-AAML-01A 2 8 Out-of-frame Inter-chr q13.2 p13.3 Seq+ 82356 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF20-EPB41L1 PHF20 chr20 35842744 + EPB41L1 chr20 36212272 + Exonic hg38 BLCA TCGA-XF-AAMQ-01A 4 38 In-Frame Intra-chr q11.22 Transcription factor q11.23 Seq+ 82357 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-ANO1 SHANK2 chr11 70485314 - ANO1 chr11 70156947 + Exonic hg38 BLCA TCGA-XF-AAMQ-01A 4 9 Out-of-frame Intra-chr q13.4 q13.3 Seq+ 82358 ChimerSeq TCGA FAWG TCGA_RNA-Seq MATN2-SFMBT1 MATN2 chr8 97888242 + SFMBT1 chr3 52916214 - Exonic hg38 BLCA TCGA-XF-AAMQ-01A 3 4 Out-of-frame Inter-chr q22.1 p21.1 Seq+ 82359 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD51B-SMOC1 RAD51B chr14 68468250 + SMOC1 chr14 69992417 + Exonic hg38 BLCA TCGA-XF-AAMQ-01A 2 4 In-Frame Intra-chr q24.1 q24.2 Seq+ 82360 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHROOM2-FRMPD4 SHROOM2 chrX 9939366 + FRMPD4 chrX 12707469 + Exonic hg38 BLCA TCGA-XF-AAMQ-01A 1 3 In-Frame Intra-chr p22.2 p22.2 Seq+ 82361 ChimerSeq TCGA FAWG TCGA_RNA-Seq ORAOV1-SHANK2 ORAOV1 chr11 69675190 - SHANK2 chr11 70492465 - Exonic hg38 BLCA TCGA-XF-AAMQ-01A 1 2 Out-of-frame Intra-chr q13.3 q13.4 82362 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPUL1-CNN1 HNRNPUL1 chr19 41294686 + CNN1 chr19 11541076 + Exonic hg38 BLCA TCGA-XF-AAMT-01A 13 62 In-Frame Intra-chr q13.2 p13.2 Tumor suppressor gene Seq+ 82363 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB35-GCN1 RAB35 chr12 120108417 - GCN1 chr12 120150043 - Exonic hg38 BLCA TCGA-XF-AAMT-01A 11 62 In-Frame Intra-chr q24.23 q24.23 82364 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAST4-ST8SIA4 MAST4 chr5 67133646 + ST8SIA4 chr5 100856396 - Exonic hg38 BLCA TCGA-XF-AAMT-01A 4 10 Out-of-frame Intra-chr q12.3 AGC:MAST q21.1 Seq+ 82365 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMYD2-PTP4A1 SMYD2 chr1 214281427 + PTP4A1 chr6 63576436 + Exonic hg38 BLCA TCGA-XF-AAMT-01A 1 5 CDS-5'UTR Inter-chr q32.3 q12 Seq+ 82366 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPC-PAPOLA HNRNPC chr14 21264672 - PAPOLA chr14 96554485 + Exonic hg38 BLCA TCGA-XF-AAMW-01A 18 115 Out-of-frame Intra-chr q11.2 q32.2 Seq+ 82367 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELMSAN1-NUBPL ELMSAN1 chr14 73787102 - NUBPL chr14 31599289 + Exonic hg38 BLCA TCGA-XF-AAMW-01A 29 59 5'UTR-5'UTR Intra-chr q24.3 q12 Seq+ 82368 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCNX1-FRMD6 PCNX1 chr14 70908003 + FRMD6 chr14 51489341 + Exonic hg38 BLCA TCGA-XF-AAMW-01A 11 44 CDS-5'UTR Intra-chr q24.2 q22.1 82369 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPECC1L-UPB1 SPECC1L chr22 24270983 + UPB1 chr22 24510749 + Exonic hg38 BLCA TCGA-XF-AAMW-01A 11 34 5'UTR-CDS Intra-chr q11.23 q11.23 Seq+ 82370 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTHFD1-PAPLN MTHFD1 chr14 64388468 + PAPLN chr14 73244644 + Exonic hg38 BLCA TCGA-XF-AAMW-01A 7 36 Out-of-frame Intra-chr q23.3 q24.2 Seq+ 82371 ChimerSeq TCGA FAWG TCGA_RNA-Seq C14orf93-TIMM9 C14orf93 chr14 23010101 - TIMM9 chr14 58411971 - Exonic hg38 BLCA TCGA-XF-AAMW-01A 8 4 5'UTR-5'UTR Intra-chr q11.2 q23.1 Seq+ 82372 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1QTNF6-SYN3 C1QTNF6 chr22 37197603 - SYN3 chr22 32980702 - Exonic hg38 BLCA TCGA-XF-AAMW-01A 5 12 5'UTR-CDS Intra-chr q12.3 q12.3 Seq+ 82373 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNB-RFPL3S PITPNB chr22 27896552 - RFPL3S chr22 32360839 - Exonic hg38 BLCA TCGA-XF-AAMW-01A 5 9 CDS-3'UTR Intra-chr q12.1 q12.3 Seq+ 82374 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP4R4-MYH6 PPP4R4 chr14 94176127 + MYH6 chr14 23386131 - Exonic hg38 BLCA TCGA-XF-AAMW-01A 4 12 3'UTR-CDS Intra-chr q32.12 q11.2 Seq+ 82375 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIPA1L1-PAPOLA SIPA1L1 chr14 71321181 + PAPOLA chr14 96520055 + Exonic hg38 BLCA TCGA-XF-AAMW-01A 5 5 5'UTR-5'UTR Intra-chr q24.2 q32.2 Seq+ 82376 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALG12-208E9.1 ALG12 chr22 49913385 - 208E9.1 chr22 23583478 - Exonic hg38 BLCA TCGA-XF-AAMW-01A 4 8 Out-of-frame Intra-chr q13.33 82377 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG14-MED6 ATG14 chr14 55385859 - MED6 chr14 70584943 - Exonic hg38 BLCA TCGA-XF-AAMW-01A 3 12 In-Frame Intra-chr q22.3 q24.2 Seq+ 82378 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBAP2-LINGO2 UBAP2 chr9 33932562 - LINGO2 chr9 27950706 - Exonic hg38 BLCA TCGA-XF-AAMW-01A 3 11 5'UTR-5'UTR Intra-chr p13.3 p21.1 Seq+ 82379 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFIP11-IL17RA TFIP11 chr22 26510064 - IL17RA chr22 17097062 + Exonic hg38 BLCA TCGA-XF-AAMW-01A 3 6 Out-of-frame Intra-chr q12.1 q11.1 Seq+ 82380 ChimerSeq TCGA FAWG TCGA_RNA-Seq P2RY6-MRPS35 P2RY6 chr11 73264649 + MRPS35 chr12 27737539 + Exonic hg38 BLCA TCGA-XF-AAMW-01A 2 8 5'UTR-CDS Inter-chr q13.4 p11.22 Seq+ 82381 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNE2-ATG2B SYNE2 chr14 64031357 + ATG2B chr14 96295560 - Exonic hg38 BLCA TCGA-XF-AAMW-01A 1 11 In-Frame Intra-chr q23.2 q32.2 Seq+ 82382 ChimerSeq TCGA FAWG TCGA_RNA-Seq DUXAP9-AP5M1 DUXAP9 chr14 19066347 + AP5M1 chr14 57274244 + Exonic hg38 BLCA TCGA-XF-AAMW-01A 2 6 3'UTR-CDS Intra-chr q11.2 q22.3 82383 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC88C-SUSD6 CCDC88C chr14 91408659 - SUSD6 chr14 69658513 + Exonic hg38 BLCA TCGA-XF-AAMW-01A 2 5 CDS-5'UTR Intra-chr q32.12 q24.1 82384 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKN2A-EXD2 CDKN2A chr9 21974678 - EXD2 chr14 69228816 + Exonic hg38 BLCA TCGA-XF-AAMW-01A 2 5 In-Frame Inter-chr p21.3 Oncogene Tumor suppressor gene q24.1 Seq+ 82385 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK3-BAG5 MARK3 chr14 103468186 + BAG5 chr14 103561192 - Exonic hg38 BLCA TCGA-XF-AAMW-01A 2 4 Out-of-frame Intra-chr q32.32 CAMK:CAMKL q32.33 Seq+ 82386 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD51B-SIPA1L1 RAD51B chr14 67835196 + SIPA1L1 chr14 71576535 + Exonic hg38 BLCA TCGA-XF-AAMW-01A 1 7 5'UTR-5'UTR Intra-chr q24.1 q24.2 82387 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUSD6-SIVA1 SUSD6 chr14 69611828 + SIVA1 chr14 104766790 + Exonic hg38 BLCA TCGA-XF-AAMW-01A 1 4 5'UTR-3'UTR Intra-chr q24.1 q32.33 82388 ChimerSeq TCGA FAWG TCGA_RNA-Seq VRK1-MMP14 VRK1 chr14 96797447 + MMP14 chr14 22843257 + Exonic hg38 BLCA TCGA-XF-AAMW-01A 1 4 5'UTR-CDS Intra-chr q32.2 CK1:VRK q11.2 82389 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAD1-C14orf37 DAD1 chr14 22575059 - C14orf37 chr14 58139414 - Exonic hg38 BLCA TCGA-XF-AAMW-01A 1 3 Out-of-frame Intra-chr q11.2 q23.1 82390 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4K5-ADCK1 MAP4K5 chr14 50504800 - ADCK1 chr14 77887091 + Exonic hg38 BLCA TCGA-XF-AAMW-01A 1 3 Out-of-frame Intra-chr q22.1 q24.3 Atypical:ABC1 Seq+ 82391 ChimerSeq TCGA FAWG TCGA_RNA-Seq MMP14-PPM1A MMP14 chr14 22845366 + PPM1A chr14 60282684 + Exonic hg38 BLCA TCGA-XF-AAMW-01A 1 3 In-Frame Intra-chr q11.2 q23.1 Tumor suppressor gene 82392 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHH1-L2HGDH PLEKHH1 chr14 67541993 + L2HGDH chr14 50269330 - Exonic hg38 BLCA TCGA-XF-AAMW-01A 1 3 In-Frame Intra-chr q24.1 q21.3 Seq+ 82393 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOGARAM1-STYX TOGARAM1 chr14 44964467 + STYX chr14 52744852 + Exonic hg38 BLCA TCGA-XF-AAMW-01A 1 2 In-Frame Intra-chr q21.2 q22.1 82394 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1794043 + TACC3 chr4 1744518 + Exonic hg38 BLCA TCGA-XF-AAMX-01A 26 956 Out-of-frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 82395 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXK2-OGFOD3 FOXK2 chr17 82520307 + OGFOD3 chr17 82409410 - Exonic hg38 BLCA TCGA-XF-AAMX-01A 12 37 In-Frame Intra-chr q25.3 Transcription factor q25.3 Seq+ 82396 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMSAP1-RABL6 CAMSAP1 chr9 135903998 - RABL6 chr9 136813259 + Exonic hg38 BLCA TCGA-XF-AAMX-01A 5 48 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 82397 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBTD2-SH3PXD2B UBTD2 chr5 172283596 - SH3PXD2B chr5 172325380 - Exonic hg38 BLCA TCGA-XF-AAMX-01A 7 34 Out-of-frame Intra-chr q35.1 q35.1 Seq+ 82398 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUFIP2-VTN NUFIP2 chr17 29285992 - VTN chr17 28370270 - Exonic hg38 BLCA TCGA-XF-AAMX-01A 8 26 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 82399 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF6-BCAS3 DCAF6 chr1 168023047 + BCAS3 chr17 60910532 + Exonic hg38 BLCA TCGA-XF-AAMX-01A 4 26 Out-of-frame Inter-chr q24.2 q23.2 Seq+ 82400 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC6B-FAM83F TNRC6B chr22 40044998 + FAM83F chr22 40019168 + Exonic hg38 BLCA TCGA-XF-AAMX-01A 5 17 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 82401 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARL13B-EPHA6 ARL13B chr3 94003908 + EPHA6 chr3 97010004 + Exonic hg38 BLCA TCGA-XF-AAMX-01A 3 10 Out-of-frame Intra-chr q11.1 q11.2 Seq+ 82402 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPD-PDE4D CPD chr17 30443971 + PDE4D chr5 59215968 - Exonic hg38 BLCA TCGA-XF-AAMX-01A 3 10 In-Frame Inter-chr q11.2 Tumor suppressor gene q12.1 Seq+ 82403 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPKBP1-VPS39 MAPKBP1 chr15 41799914 + VPS39 chr15 42163728 - Exonic hg38 BLCA TCGA-XF-AAMX-01A 1 13 Out-of-frame Intra-chr q15.1 q15.1 Seq+ 82404 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIBP1-CACNA1C PPFIBP1 chr12 27524365 + CACNA1C chr12 2581590 + Exonic hg38 BLCA TCGA-XF-AAMX-01A 1 10 5'UTR-3'UTR Intra-chr p11.23 p13.33 Seq+ 82405 ChimerSeq TCGA FAWG TCGA_RNA-Seq B3GLCT-POMP B3GLCT chr13 31247966 + POMP chr13 28662410 + Exonic hg38 BLCA TCGA-XF-AAMX-01A 1 8 In-Frame Intra-chr q12.3 q12.3 82406 ChimerSeq TCGA FAWG TCGA_RNA-Seq BDH1-BMT2 BDH1 chr3 197546361 - BMT2 chr7 112832675 - Exonic hg38 BLCA TCGA-XF-AAMX-01A 1 8 3'UTR-CDS Inter-chr q31.1 82407 ChimerSeq TCGA FAWG TCGA_RNA-Seq FREM1-UNC13B FREM1 chr9 14909914 - UNC13B chr9 35228015 + Exonic hg38 BLCA TCGA-XF-AAMX-01A 1 7 5'UTR-CDS Intra-chr p22.3 p13.3 Seq+ 82408 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3PXD2A-ITPRIP SH3PXD2A chr10 103660983 - ITPRIP chr10 104316064 - Exonic hg38 BLCA TCGA-XF-AAMX-01A 1 5 CDS-5'UTR Intra-chr q24.33 q25.1 82409 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPC24-DOCK6 SPC24 chr19 11155617 - DOCK6 chr19 11201052 - Exonic hg38 BLCA TCGA-XF-AAMX-01A 1 2 Out-of-frame Intra-chr p13.2 p13.2 82410 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM2-ZNF385A R3HDM2 chr12 57310264 - ZNF385A chr12 54375954 - Exonic hg38 BLCA TCGA-XF-AAMY-01A 11 52 In-Frame Intra-chr q13.3 q13.13 Transcription factor Seq+ 82411 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNA1I-FBXW5 CACNA1I chr22 39682661 + FBXW5 chr9 136941171 - Exonic hg38 BLCA TCGA-XF-AAMY-01A 8 22 Out-of-frame Inter-chr q13.1 q34.3 Seq+ 82412 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSEN2-SYN2 TSEN2 chr3 12496554 + SYN2 chr3 12183312 + Exonic hg38 BLCA TCGA-XF-AAMY-01A 7 20 Out-of-frame Intra-chr p25.2 p25.2 Seq+ 82413 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH1L-UBQLN4 ASH1L chr1 155562153 - UBQLN4 chr1 156051857 - Exonic hg38 BLCA TCGA-XF-AAMY-01A 2 18 5'UTR-CDS Intra-chr q22 Transcription factor q22 Seq+ 82414 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL21B-CDKAL1 METTL21B chr12 57773073 + CDKAL1 chr6 21198021 + Exonic hg38 BLCA TCGA-XF-AAMY-01A 1 6 Out-of-frame Inter-chr p22.3 82415 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMG1-SULT1A2 SMG1 chr16 18896052 - SULT1A2 chr16 28595675 - Exonic hg38 BLCA TCGA-XF-AAMY-01A 1 4 In-Frame Intra-chr p12.3 Atypical:PIKK p11.2 82416 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806934 + TACC3 chr4 1739702 + Exonic hg38 BLCA TCGA-XF-AAMZ-01A 266 654 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 82417 ChimerSeq TCGA FAWG TCGA_RNA-Seq YWHAZ-GAL YWHAZ chr8 100951929 - GAL chr11 68684924 + Exonic hg38 BLCA TCGA-XF-AAMZ-01A 83 326 5'UTR-5'UTR Inter-chr q22.3 q13.2 Seq+ 82418 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO10-PFDN2 MYO10 chr5 16710908 - PFDN2 chr1 161102375 - Exonic hg38 BLCA TCGA-XF-AAMZ-01A 21 126 In-Frame Inter-chr p15.1 q23.3 Seq+ 82419 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAP30BP-MYO15B SAP30BP chr17 75671863 + MYO15B chr17 75619681 + Exonic hg38 BLCA TCGA-XF-AAMZ-01A 6 24 In-Frame Intra-chr q25.1 q25.1 Seq+ 82420 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL21-CPT1A MRPL21 chr11 68892890 - CPT1A chr11 68760338 - Exonic hg38 BLCA TCGA-XF-AAMZ-01A 3 31 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 82421 ChimerSeq TCGA FAWG TCGA_RNA-Seq DEAF1-SH3GL1 DEAF1 chr11 686858 - SH3GL1 chr19 4366994 - Exonic hg38 BLCA TCGA-XF-AAMZ-01A 2 2 5'UTR-CDS Inter-chr Transcription factor p13.3 Seq+ 82422 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM2D2-GOT1L1 TM2D2 chr8 38993545 - GOT1L1 chr8 37934486 - Exonic hg38 BLCA TCGA-XF-AAMZ-01A 1 4 Out-of-frame Intra-chr p11.22 p11.23 Seq+ 82423 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIB1-SAE1 TRIB1 chr8 125431262 + SAE1 chr19 47203671 + Exonic hg38 BLCA TCGA-XF-AAN0-01A 4 26 Out-of-frame Inter-chr q24.13 q13.32 Seq+ 82424 ChimerSeq TCGA FAWG TCGA_RNA-Seq GABRE-SERINC2 GABRE chrX 151974570 - SERINC2 chr1 31432967 + Exonic hg38 BLCA TCGA-XF-AAN3-01A 1 2 In-Frame Inter-chr q28 p35.2 82425 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP11B-NET1 ATP11B chr3 182898772 + NET1 chr10 5451830 + Exonic hg38 BLCA TCGA-XF-AAN4-01A 7 5 In-Frame Inter-chr q26.33 Oncogene p15.1 Seq+ 82426 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM228B-UBXN2A FAM228B chr2 24147086 + UBXN2A chr2 23958301 + Exonic hg38 BLCA TCGA-XF-AAN5-01A 1 2 CDS-5'UTR Intra-chr p23.3 p23.3 82427 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDLRAD3-PAMR1 LDLRAD3 chr11 35944144 + PAMR1 chr11 35441693 - Exonic hg38 BLCA TCGA-XF-AAN7-01A 2 6 In-Frame Intra-chr p13 p13 Seq+ 82428 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKAL1-GUCA1A CDKAL1 chr6 21000372 + GUCA1A chr6 42162920 + Exonic hg38 BLCA TCGA-XF-AAN7-01A 1 5 CDS-5'UTR Intra-chr p22.3 p21.1 82429 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPRE1-UQCC1 MAPRE1 chr20 32826048 + UQCC1 chr20 35347272 - Exonic hg38 BLCA TCGA-YC-A89H-01A 11 24 Out-of-frame Intra-chr q11.21 q11.22 82430 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASPH-TACC1 ASPH chr8 61618978 - TACC1 chr8 38742351 + Exonic hg38 BLCA TCGA-YC-A89H-01A 2 9 CDS-5'UTR Intra-chr q12.3 p11.22 Seq+ 82431 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUMB-TTLL5 NUMB chr14 73292734 - TTLL5 chr14 75820007 + Exonic hg38 BLCA TCGA-YF-AA3L-01A 4 5 In-Frame Intra-chr q24.3 Tumor suppressor gene q24.3 Seq+ 82432 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM1-SDC3 PUM1 chr1 31059299 - SDC3 chr1 30878740 - Exonic hg38 BLCA TCGA-ZF-A9R1-01A 2 24 In-Frame Intra-chr p35.2 p35.2 Seq+ 82433 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASSF8-CMAS RASSF8 chr12 25959148 + CMAS chr12 22062281 + Exonic hg38 BLCA TCGA-ZF-A9R3-01A 6 28 5'UTR-5'UTR Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 82434 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF1B-NF1 KIF1B chr1 10343287 + NF1 chr17 31356460 + Exonic hg38 BLCA TCGA-ZF-A9R3-01A 3 16 In-Frame Inter-chr p36.22 Tumor suppressor gene q11.2 Oncogene Tumor suppressor gene Seq+ 82435 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUFT1-ANXA9 TUFT1 chr1 151540426 + ANXA9 chr1 150983338 + Exonic hg38 BLCA TCGA-ZF-A9R4-01A 4 59 In-Frame Intra-chr q21.3 q21.3 Seq+ 82436 ChimerSeq TCGA FAWG TCGA_RNA-Seq BIN3-PHYHIP BIN3 chr8 22669044 - PHYHIP chr8 22228386 - Exonic hg38 BLCA TCGA-ZF-A9R7-01A 2 11 5'UTR-5'UTR Intra-chr p21.3 p21.3 Seq+ 82437 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFSWAP-EP400NL SFSWAP chr12 131778330 + EP400NL chr12 132103997 + Exonic hg38 BLCA TCGA-ZF-A9R7-01A 2 9 Out-of-frame Intra-chr q24.33 q24.33 82438 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAN2B1-RTBDN MAN2B1 chr19 12649913 - RTBDN chr19 12826871 - Exonic hg38 BLCA TCGA-ZF-A9R9-01A 16 73 In-Frame Intra-chr p13.13 p13.13 Seq+ 82439 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL2L1-NOL4L BCL2L1 chr20 31721655 - NOL4L chr20 32486801 - Exonic hg38 BLCA TCGA-ZF-A9R9-01A 1 4 CDS-5'UTR Intra-chr q11.21 Oncogene q11.21 82440 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-BEST3 FRS2 chr12 69537983 + BEST3 chr12 69643787 - Exonic hg38 BLCA TCGA-ZF-A9RC-01A 1 34 5'UTR-CDS Intra-chr q15 q15 Seq+ 82441 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASAP1-UBBP4 ASAP1 chr8 130214556 - UBBP4 chr17 22204087 + Exonic hg38 BLCA TCGA-ZF-A9RC-01A 2 23 CDS-5'UTR Inter-chr q24.22 p11.2 82442 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNC13A-NOSIP UNC13A chr19 17617702 - NOSIP chr19 49560692 - Exonic hg38 BLCA TCGA-ZF-A9RC-01A 1 5 CDS-5'UTR Intra-chr p13.11 q13.33 82443 ChimerSeq TCGA FAWG TCGA_RNA-Seq JUP-ACLY JUP chr17 41786588 - ACLY chr17 41878924 - Exonic hg38 BLCA TCGA-ZF-A9RD-01A 8 38 5'UTR-CDS Intra-chr q21.2 Tumor suppressor gene q21.2 Seq+ 82444 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L4B-PTBP3 EPB41L4B chr9 109320141 - PTBP3 chr9 112297916 - Exonic hg38 BLCA TCGA-ZF-A9RD-01A 1 2 In-Frame Intra-chr q31.3 q32 82445 ChimerSeq TCGA FAWG TCGA_RNA-Seq BPTF-TTYH2 BPTF chr17 67826337 + TTYH2 chr17 74237294 + Exonic hg38 BLCA TCGA-ZF-A9RE-01A 2 6 Out-of-frame Intra-chr q24.2 Transcription factor q25.1 Seq+ 82446 ChimerSeq TCGA FAWG TCGA_RNA-Seq C10orf11-P4HA1 C10orf11 chr10 75438494 + P4HA1 chr10 73030370 - Exonic hg38 BLCA TCGA-ZF-A9RE-01A 1 3 Out-of-frame Intra-chr q22.1 82447 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTEN-LIPF PTEN chr10 87864624 + LIPF chr10 88667569 + Exonic hg38 BLCA TCGA-ZF-A9RE-01A 1000 1000 3'UTR-CDS Intra-chr q23.31 Oncogene Tumor suppressor gene q23.31 82448 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCC1-CSPG5 SMARCC1 chr3 47772817 - CSPG5 chr3 47572874 - Exonic hg38 BLCA TCGA-ZF-A9RF-01A 24 27 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 82449 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP29-ABCA4 ARHGAP29 chr1 94231407 - ABCA4 chr1 94113066 - Exonic hg38 BLCA TCGA-ZF-A9RF-01A 4 4 Out-of-frame Intra-chr p22.1 Tumor suppressor gene p22.1 Seq+ 82450 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKAL1-LIG1 CDKAL1 chr6 20649377 + LIG1 chr19 48131171 - Exonic hg38 BLCA TCGA-ZF-A9RF-01A 2 10 Out-of-frame Inter-chr p22.3 q13.33 Tumor suppressor gene Seq+ 82451 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLA2G12A-ELOVL6 PLA2G12A chr4 109729602 - ELOVL6 chr4 110059754 - Exonic hg38 BLCA TCGA-ZF-A9RF-01A 1 1 Out-of-frame Intra-chr q25 q25 82452 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP31-RHD USP31 chr16 23102319 - RHD chr1 25284573 + Exonic hg38 BLCA TCGA-ZF-A9RL-01A 18 37 In-Frame Inter-chr p12.2 p36.11 Seq+ 82453 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFT52-MXRA8 IFT52 chr20 43596522 + MXRA8 chr1 1356704 - Exonic hg38 BLCA TCGA-ZF-A9RL-01A 4 7 Out-of-frame Inter-chr q13.12 p36.33 Seq+ 82454 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAG1-KIAA1429 PAG1 chr8 81029996 - KIAA1429 chr8 94514951 - Exonic hg38 BLCA TCGA-ZF-A9RL-01A 2 10 Out-of-frame Intra-chr q21.13 q22.1 Seq+ 82455 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC2HC1A-ANGPT1 ZC2HC1A chr8 78698513 + ANGPT1 chr8 107264351 - Exonic hg38 BLCA TCGA-ZF-A9RL-01A 3 6 In-Frame Intra-chr q21.13 q23.1 Seq+ 82456 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNT1-LALBA CCNT1 chr12 48705768 - LALBA chr12 48568017 - Exonic hg38 BLCA TCGA-ZF-A9RM-01A 16 69 Out-of-frame Intra-chr q13.12 q13.11 Seq+ 82457 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13L-WSCD2 MED13L chr12 116237468 - WSCD2 chr12 108224739 + Exonic hg38 BLCA TCGA-ZF-A9RM-01A 5 35 In-Frame Intra-chr q24.21 q23.3 Seq+ 82458 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPF-TMLHE HNRNPF chr10 43394630 - TMLHE chrX 155545277 - Exonic hg38 BLCA TCGA-ZF-A9RM-01A 2 5 5'UTR-5'UTR Inter-chr q11.21 q28 Seq+ 82459 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTAN1-ZER1 SPTAN1 chr9 128552696 + ZER1 chr9 128742745 - Exonic hg38 BLCA TCGA-ZF-A9RM-01A 1 6 5'UTR-CDS Intra-chr q34.11 q34.11 82460 ChimerSeq TCGA FAWG TCGA_RNA-Seq YEATS2-HTR3E YEATS2 chr3 183715262 + HTR3E chr3 184100485 + Exonic hg38 BLCA TCGA-ZF-A9RN-01A 9 129 In-Frame Intra-chr q27.1 q27.1 Seq+ 82461 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRK-POPDC3 PTPRK chr6 128397566 - POPDC3 chr6 105162160 - Exonic hg38 BLCA TCGA-ZF-A9RN-01A 4 7 5'UTR-5'UTR Intra-chr Tumor suppressor gene q21 Seq+ 82462 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP4-CCDC13 USP4 chr3 49310620 - CCDC13 chr3 42758351 - Exonic hg38 BLCA TCGA-ZF-AA4N-01A 2 5 CDS-5'UTR Intra-chr p21.31 p22.1 Seq+ 82463 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX27-THEM4 SNX27 chr1 151612512 + THEM4 chr1 151877125 - Exonic hg38 BLCA TCGA-ZF-AA4R-01A 31 30 In-Frame Intra-chr q21.3 q21.3 Seq+ 82464 ChimerSeq TCGA FAWG TCGA_RNA-Seq BNIPL-THEM5 BNIPL chr1 151039025 + THEM5 chr1 151848293 - Exonic hg38 BLCA TCGA-ZF-AA4R-01A 1000 1000 Out-of-frame Intra-chr q21.3 q21.3 82465 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLLT6-TCAP MLLT6 chr17 38705741 + TCAP chr17 39665373 + Exonic hg38 BLCA TCGA-ZF-AA4T-01A 340 2209 3'UTR-CDS Intra-chr q12 q12 Seq+ 82466 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRCIN1-PSMB3 SRCIN1 chr17 38605633 - PSMB3 chr17 38762411 + Exonic hg38 BLCA TCGA-ZF-AA4T-01A 12 153 5'UTR-3'UTR Intra-chr q12 Seq+ 82467 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK12-IKZF3 CDK12 chr17 39501439 + IKZF3 chr17 39832151 - Exonic hg38 BLCA TCGA-ZF-AA4T-01A 30 63 Out-of-frame Intra-chr q12 Oncogene q21.1 Tumor suppressor gene Transcription factor Seq+ 82468 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIPG-UCMA LIPG chr18 49569548 + UCMA chr10 13233800 - Exonic hg38 BLCA TCGA-ZF-AA4T-01A 7 36 In-Frame Inter-chr q21.1 p13 Seq+ 82469 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRCIN1-CWC25 SRCIN1 chr17 38574876 - CWC25 chr17 38821073 - Exonic hg38 BLCA TCGA-ZF-AA4T-01A 1 48 5'UTR-5'UTR Intra-chr q12 q12 82470 ChimerSeq TCGA FAWG TCGA_RNA-Seq IKZF3-SRCIN1 IKZF3 chr17 39829387 - SRCIN1 chr17 38596129 - Exonic hg38 BLCA TCGA-ZF-AA4T-01A 3 31 5'UTR-5'UTR Intra-chr q21.1 Tumor suppressor gene Transcription factor q12 Seq+ 82471 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR6-CPNE8 WDR6 chr3 49007531 + CPNE8 chr12 38654070 - Exonic hg38 BLCA TCGA-ZF-AA4T-01A 6 12 Out-of-frame Inter-chr p21.31 q12 Seq+ 82472 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNGT1-NUDT5 GNGT1 chr7 93591771 + NUDT5 chr10 12170770 - Exonic hg38 BLCA TCGA-ZF-AA4T-01A 2 23 5'UTR-CDS Inter-chr q21.3 p14 82473 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC13-GOLPH3L SEC13 chr3 10321050 - GOLPH3L chr1 150661928 - Exonic hg38 BLCA TCGA-ZF-AA4T-01A 5 6 In-Frame Inter-chr p25.3 q21.3 Seq+ 82474 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLLT6-PNMT MLLT6 chr17 38705741 + PNMT chr17 39669629 + Exonic hg38 BLCA TCGA-ZF-AA4T-01A 3 9 3'UTR-CDS Intra-chr q12 q12 Seq+ 82475 ChimerSeq TCGA FAWG TCGA_RNA-Seq L3MBTL4-TRDMT1 L3MBTL4 chr18 6237964 - TRDMT1 chr10 17174660 - Exonic hg38 BLCA TCGA-ZF-AA4T-01A 3 7 In-Frame Inter-chr p11.31 Tumor suppressor gene Transcription factor p13 Seq+ 82476 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK12-PLXDC1 CDK12 chr17 39463117 + PLXDC1 chr17 39087702 - Exonic hg38 BLCA TCGA-ZF-AA4T-01A 1 10 Out-of-frame Intra-chr q12 Oncogene q12 Seq+ 82477 ChimerSeq TCGA FAWG TCGA_RNA-Seq IMPA2-THEM7P IMPA2 chr18 12014373 + THEM7P chr11 32230361 - Exonic hg38 BLCA TCGA-ZF-AA4T-01A 1 7 Out-of-frame Inter-chr p11.21 p13 82478 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO5B-DCC MYO5B chr18 50194767 - DCC chr18 52752054 + Exonic hg38 BLCA TCGA-ZF-AA4T-01A 2 3 Out-of-frame Intra-chr q21.1 q21.2 Oncogene Tumor suppressor gene Seq+ 82479 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL5-TMEM156 KLHL5 chr4 39115330 + TMEM156 chr4 38971137 - Exonic hg38 BLCA TCGA-ZF-AA4T-01A 1 5 Out-of-frame Intra-chr p14 p14 82480 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D15-CPSF6 TBC1D15 chr12 71918548 + CPSF6 chr12 69269512 + Exonic hg38 BLCA TCGA-ZF-AA4U-01A 5 11 CDS-3'UTR Intra-chr q21.1 q15 Seq+ 82481 ChimerSeq TCGA FAWG TCGA_RNA-Seq LGR5-PTPRR LGR5 chr12 71504685 + PTPRR chr12 70892977 - Exonic hg38 BLCA TCGA-ZF-AA4U-01A 2 11 Out-of-frame Intra-chr q21.1 q15 Seq+ 82482 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNMB4-PTPRR KCNMB4 chr12 70434292 + PTPRR chr12 70754380 - Exonic hg38 BLCA TCGA-ZF-AA4U-01A 1000 1000 3'UTR-3'UTR Intra-chr q15 q15 82483 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPX4-MIDN GPX4 chr19 1106459 + MIDN chr19 1256995 + Exonic hg38 BLCA TCGA-ZF-AA4V-01A 1 34 In-Frame Intra-chr p13.3 p13.3 82484 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK1D-DUS1L CSNK1D chr17 82245976 - DUS1L chr17 82065069 - Exonic hg38 BLCA TCGA-ZF-AA4V-01A 3 10 3'UTR-5'UTR Intra-chr q25.3 q25.3 Seq+ 82485 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H7A-CD99 ZC3H7A chr16 11774236 - CD99 chrY 2714422 + Exonic hg38 BLCA TCGA-ZF-AA4V-01A 4 6 Out-of-frame Inter-chr p13.13 p22.33 Seq+ 82486 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPBL-MRPS30 NIPBL chr5 36877178 + MRPS30 chr5 44811009 + Exonic hg38 BLCA TCGA-ZF-AA4V-01A 4 4 5'UTR-CDS Intra-chr p13.2 p12 Seq+ 82487 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPSF6-EXOC3 CPSF6 chr12 69262562 + EXOC3 chr5 464290 + Exonic hg38 BLCA TCGA-ZF-AA4V-01A 2 5 3'UTR-CDS Inter-chr q15 p15.33 Seq+ 82488 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF316-MAD1L1 ZNF316 chr7 6644593 + MAD1L1 chr7 1816228 - Exonic hg38 BLCA TCGA-ZF-AA4W-01A 1 2 Out-of-frame Intra-chr p22.1 Transcription factor p22.3 Tumor suppressor gene 82489 ChimerSeq TCGA FAWG TCGA_RNA-Seq TYMS-GNAS TYMS chr18 662320 + GNAS chr20 58895612 + Exonic hg38 BLCA TCGA-ZF-AA4X-01A 1 1 In-Frame Inter-chr p11.32 q13.32 Oncogene 82490 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRP68-CDK3 SRP68 chr17 76046038 - CDK3 chr17 76005298 + Exonic hg38 BLCA TCGA-ZF-AA51-01A 7 31 CDS-5'UTR Intra-chr q25.1 q25.1 CMGC:CDK Seq+ 82491 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK2-C11orf84 MARK2 chr11 63839560 + C11orf84 chr11 63817805 + Exonic hg38 BLCA TCGA-ZF-AA51-01A 4 11 Out-of-frame Intra-chr q13.1 CAMK:CAMKL q13.1 Seq+ 82492 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAB2-PPP1R14C TAB2 chr6 149397764 + PPP1R14C chr6 150214744 + Exonic hg38 BLCA TCGA-ZF-AA51-01A 2 12 In-Frame Intra-chr q25.1 q25.1 82493 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF665-NLRP12 ZNF665 chr19 53182884 - NLRP12 chr19 53796029 - Exonic hg38 BLCA TCGA-ZF-AA51-01A 1 12 Out-of-frame Intra-chr q13.42 Transcription factor q13.42 82494 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN6-LRRC23 PTPN6 chr12 6952177 + LRRC23 chr12 6905585 + Exonic hg38 BLCA TCGA-ZF-AA51-01A 2 7 CDS-5'UTR Intra-chr p13.31 Tumor suppressor gene p13.31 Seq+ 82495 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLG3-MED12 DLG3 chrX 70454316 + MED12 chrX 71127893 + Exonic hg38 BLCA TCGA-ZF-AA51-01A 2 3 Out-of-frame Intra-chr q13.1 q13.1 Oncogene 82496 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM4-TMEM259 R3HDM4 chr19 913087 - TMEM259 chr19 1014473 - Exonic hg38 BLCA TCGA-ZF-AA51-01A 2 3 Out-of-frame Intra-chr p13.3 p13.3 82497 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADORA2B-PIGL ADORA2B chr17 15945583 + PIGL chr17 16299888 + Exonic hg38 BLCA TCGA-ZF-AA51-01A 1 4 In-Frame Intra-chr p12 p11.2 82498 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF485-TMX4 ZNF485 chr10 43609350 + TMX4 chr20 7977624 - Exonic hg38 BLCA TCGA-ZF-AA53-01A 3 1 CDS-3'UTR Inter-chr q11.21 Transcription factor p12.3 82499 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT1-DSCAS GALNT1 chr18 35663802 + DSCAS chr18 31150799 + Exonic hg38 BLCA TCGA-ZF-AA53-01A 2 4 CDS-5'UTR Intra-chr q12.2 q12.1 82500 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEURL3-FAM178B NEURL3 chr2 96505259 - FAM178B chr2 96878493 - Exonic hg38 BLCA TCGA-ZF-AA53-01A 1 4 Out-of-frame Intra-chr q11.2 q11.2 82501 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITSN1-CRYZL1 ITSN1 chr21 33642713 + CRYZL1 chr21 33624760 - Exonic hg38 BLCA TCGA-ZF-AA56-01A 1 4 5'UTR-CDS Intra-chr q22.11 q22.11 82502 ChimerSeq TCGA FAWG TCGA_RNA-Seq PALLD-TMEM53 PALLD chr4 168832171 + TMEM53 chr1 44660295 - Exonic hg38 BLCA TCGA-ZF-AA58-01A 12 86 5'UTR-CDS Inter-chr q32.3 p34.1 Seq+ 82503 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO17-OSBPL6 FBXO17 chr19 38975586 - OSBPL6 chr2 178394313 + Exonic hg38 BLCA TCGA-ZF-AA58-01A 10 54 5'UTR-CDS Inter-chr q31.2 Seq+ 82504 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMD4B-FBXO27 SAMD4B chr19 39357089 + FBXO27 chr19 39032253 - Exonic hg38 BLCA TCGA-ZF-AA58-01A 7 13 CDS-5'UTR Intra-chr q13.2 Seq+ 82505 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALA-CAMK2B RALA chr7 39623825 + CAMK2B chr7 44220901 - Exonic hg38 BLCA TCGA-ZF-AA5H-01A 62 240 5'UTR-5'UTR Intra-chr p14.1 p13 Seq+ 82506 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK13-DDX56 CDK13 chr7 40002031 + DDX56 chr7 44570128 - Exonic hg38 BLCA TCGA-ZF-AA5H-01A 20 58 Out-of-frame Intra-chr p14.1 p13 Seq+ 82507 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMIM7-CACNA1A SMIM7 chr19 16659395 - CACNA1A chr19 13255259 - Exonic hg38 BLCA TCGA-ZF-AA5H-01A 13 38 Out-of-frame Intra-chr p13.11 p13.13 Seq+ 82508 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBX3-CDK14 CBX3 chr7 26211756 + CDK14 chr7 91207165 + Exonic hg38 BLCA TCGA-ZF-AA5H-01A 6 57 CDS-3'UTR Intra-chr p15.2 q21.13 Seq+ 82509 ChimerSeq TCGA FAWG TCGA_RNA-Seq COG5-FOXP1 COG5 chr7 107548111 - FOXP1 chr3 71493555 - Exonic hg38 BLCA TCGA-ZF-AA5H-01A 4 4 5'UTR-5'UTR Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 82510 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHF1-FBL PLEKHF1 chr19 29665505 + FBL chr19 39834813 - Exonic hg38 BLCA TCGA-ZF-AA5H-01A 3 6 5'UTR-5'UTR Intra-chr q12 82511 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESYT2-NBPF15 ESYT2 chr7 158743529 - NBPF15 chr1 144440295 - Exonic hg38 BLCA TCGA-ZF-AA5H-01A 1 7 CDS-5'UTR Inter-chr q36.3 q21.1 82512 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF8-FCRLA DCAF8 chr1 160261285 - FCRLA chr1 161713085 + Exonic hg38 BLCA TCGA-ZF-AA5P-01A 6 25 5'UTR-CDS Intra-chr q23.2 q23.3 Seq+ 82513 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAN1A1-IFNGR2 MAN1A1 chr6 119301988 - IFNGR2 chr21 33478798 + Exonic hg38 BLCA TCGA-ZF-AA5P-01A 3 5 CDS-3'UTR Inter-chr q22.31 Seq+ 82514 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1H-DNAJC15 PPM1H chr12 62933923 - DNAJC15 chr13 43065686 + Exonic hg38 BLCA TCGA-ZF-AA5P-01A 2 7 Out-of-frame Inter-chr q14.2 q14.11 82515 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALT5-MUC22 B4GALT5 chr20 49640478 - MUC22 chr6 31032196 + Exonic hg38 BLCA TCGA-ZF-AA5P-01A 1 8 CDS-3'UTR Inter-chr q13.13 p21.33 82516 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRIP1-DECR1 NRIP1 chr21 15014344 - DECR1 chr8 90042728 + Exonic hg38 BLCA TCGA-ZF-AA5P-01A 2 3 5'UTR-5'UTR Inter-chr q21.1 q21.3 Seq+ 82517 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R12A-LIN7A PPP1R12A chr12 79820774 - LIN7A chr12 80889369 - Exonic hg38 BLCA TCGA-ZF-AA5P-01A 1 2 In-Frame Intra-chr q21.31 q21.31 Seq+ 82518 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAB2-CHKA GAB2 chr11 78364016 - CHKA chr11 68054047 - Exonic hg38 BRCA TCGA-3C-AAAU-01A 13 120 5'UTR-5'UTR Intra-chr q14.1 q13.2 Seq+ 82519 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-MS4A5 PPFIA1 chr11 70376600 + MS4A5 chr11 60447649 + Exonic hg38 BRCA TCGA-3C-AAAU-01A 20 49 In-Frame Intra-chr q13.3 q12.2 Seq+ 82520 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3IP-MSRB3 RAB3IP chr12 69756663 + MSRB3 chr12 65488004 + Exonic hg38 BRCA TCGA-3C-AAAU-01A 11 31 CDS-3'UTR Intra-chr q15 q14.3 82521 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHROOM3-DCST2 SHROOM3 chr4 76749090 + DCST2 chr1 155032768 - Exonic hg38 BRCA TCGA-3C-AAAU-01A 1 43 Out-of-frame Inter-chr q21.1 q21.3 82522 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT2-SRGAP1 CNOT2 chr12 70319364 + SRGAP1 chr12 63983947 + Exonic hg38 BRCA TCGA-3C-AAAU-01A 3 18 In-Frame Intra-chr q15 q14.2 Seq+ 82523 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASSF6-LEMD3 RASSF6 chr4 73593451 - LEMD3 chr12 65245669 + Exonic hg38 BRCA TCGA-3C-AAAU-01A 3 10 In-Frame Inter-chr q13.3 q14.3 Seq+ 82524 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTC-ZBTB7B BTC chr4 74794262 - ZBTB7B chr1 155010258 + Exonic hg38 BRCA TCGA-3C-AAAU-01A 1 17 CDS-5'UTR Inter-chr q13.3 q21.3 Transcription factor 82525 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPY19L2-MRPL1 DPY19L2 chr12 63668057 - MRPL1 chr4 77949797 + Exonic hg38 BRCA TCGA-3C-AAAU-01A 2 9 Out-of-frame Inter-chr q14.2 q21.1 Seq+ 82526 ChimerSeq TCGA FAWG TCGA_RNA-Seq G3BP2-PTPN1 G3BP2 chr4 75724276 - PTPN1 chr20 50561363 + Exonic hg38 BRCA TCGA-3C-AAAU-01A 2 6 5'UTR-CDS Inter-chr q21.1 q13.13 Tumor suppressor gene Seq+ 82527 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D15-ANTXR2 TBC1D15 chr12 71873003 + ANTXR2 chr4 80121277 - Exonic hg38 BRCA TCGA-3C-AAAU-01A 2 6 5'UTR-5'UTR Inter-chr q21.1 q21.21 82528 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIN3A-CSPG4 SIN3A chr15 75451423 - CSPG4 chr15 75693233 - Exonic hg38 BRCA TCGA-3C-AAAU-01A 1 6 5'UTR-CDS Intra-chr q24.2 q24.2 Seq+ 82529 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS4-PHACTR3 BCAS4 chr20 50795173 + PHACTR3 chr20 59743107 + Exonic hg38 BRCA TCGA-3C-AAAU-01A 1 4 Out-of-frame Intra-chr q13.13 q13.32 82530 ChimerSeq TCGA FAWG TCGA_RNA-Seq IKZF3-PNMT IKZF3 chr17 39864120 - PNMT chr17 39669629 + Exonic hg38 BRCA TCGA-3C-AALI-01A 209 561 In-Frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q12 Seq+ 82531 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX5-RSAD1 DDX5 chr17 64499995 - RSAD1 chr17 50479223 + Exonic hg38 BRCA TCGA-3C-AALI-01A 72 232 Out-of-frame Intra-chr q23.3 q21.33 Seq+ 82532 ChimerSeq TCGA FAWG TCGA_RNA-Seq CWC25-SLC35B1 CWC25 chr17 38825166 - SLC35B1 chr17 49706334 - Exonic hg38 BRCA TCGA-3C-AALI-01A 20 76 5'UTR-CDS Intra-chr q12 q21.33 Seq+ 82533 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCA-RGS9 PRKCA chr17 66641466 + RGS9 chr17 65225002 + Exonic hg38 BRCA TCGA-3C-AALI-01A 13 81 Out-of-frame Intra-chr q24.2 q24.1 Seq+ 82534 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACACA-PRKCA ACACA chr17 37111531 - PRKCA chr17 66641355 + Exonic hg38 BRCA TCGA-3C-AALI-01A 9 66 5'UTR-CDS Intra-chr q24.2 Seq+ 82535 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK12-PLEKHM1P1 CDK12 chr17 39463117 + PLEKHM1P1 chr17 64829249 - Exonic hg38 BRCA TCGA-3C-AALI-01A 13 36 CDS-3'UTR Intra-chr q12 Oncogene q24.1 82536 ChimerSeq TCGA FAWG TCGA_RNA-Seq HELZ-TAF15 HELZ chr17 67128651 - TAF15 chr17 35817716 + Exonic hg38 BRCA TCGA-3C-AALI-01A 7 30 CDS-3'UTR Intra-chr q24.2 q12 Seq+ 82537 ChimerSeq TCGA FAWG TCGA_RNA-Seq BPTF-PLXDC1 BPTF chr17 67966656 + PLXDC1 chr17 39087702 - Exonic hg38 BRCA TCGA-3C-AALI-01A 5 21 In-Frame Intra-chr q24.2 Transcription factor q12 Seq+ 82538 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK12-FAM20A CDK12 chr17 39471763 + FAM20A chr17 68555743 - Exonic hg38 BRCA TCGA-3C-AALI-01A 5 20 In-Frame Intra-chr q12 Oncogene q24.2 Seq+ 82539 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD3-FAM20A STARD3 chr17 39637231 + FAM20A chr17 68551951 - Exonic hg38 BRCA TCGA-3C-AALI-01A 6 14 5'UTR-CDS Intra-chr q12 q24.2 Seq+ 82540 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2Z-MRPL45 UBE2Z chr17 48913021 + MRPL45 chr17 38306533 + Exonic hg38 BRCA TCGA-3C-AALI-01A 5 15 CDS-3'UTR Intra-chr q21.32 q12 Seq+ 82541 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD12-TLK2 PSMD12 chr17 67366412 - TLK2 chr17 62481121 + Exonic hg38 BRCA TCGA-3C-AALI-01A 5 9 5'UTR-5'UTR Intra-chr q24.2 q23.2 Other:TLK Seq+ 82542 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBD1-MYO18A TUBD1 chr17 59890831 - MYO18A chr17 29074914 - Exonic hg38 BRCA TCGA-3C-AALI-01A 4 13 Out-of-frame Intra-chr q23.1 q11.2 Oncogene Seq+ 82543 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBD1-TIAF1 TUBD1 chr17 59890831 - TIAF1 chr17 29074914 - Exonic hg38 BRCA TCGA-3C-AALI-01A 4 13 5'UTR-5'UTR Intra-chr q23.1 q11.2 Oncogene Seq+ 82544 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARSG-CDK12 ARSG chr17 68356804 + CDK12 chr17 39511529 + Exonic hg38 BRCA TCGA-3C-AALI-01A 6 4 In-Frame Intra-chr q24.2 q12 Oncogene Seq+ 82545 ChimerSeq TCGA FAWG TCGA_RNA-Seq CWC25-PRKAR1A CWC25 chr17 38825166 - PRKAR1A chr17 68515394 + Exonic hg38 BRCA TCGA-3C-AALI-01A 1 20 5'UTR-5'UTR Intra-chr q12 q24.2 Oncogene Tumor suppressor gene Seq+ 82546 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDF2-MSI2 SDF2 chr17 28655287 - MSI2 chr17 57257098 + Exonic hg38 BRCA TCGA-3C-AALI-01A 5 4 Out-of-frame Intra-chr q11.2 q22 Seq+ 82547 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUPT6H-PRKCA SUPT6H chr17 28688218 + PRKCA chr17 66496201 + Exonic hg38 BRCA TCGA-3C-AALI-01A 5 3 Out-of-frame Intra-chr q11.2 q24.2 Seq+ 82548 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEX2-ACSF2 TEX2 chr17 64171100 - ACSF2 chr17 50460677 + Exonic hg38 BRCA TCGA-3C-AALI-01A 2 8 Out-of-frame Intra-chr q23.3 q21.33 Seq+ 82549 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMD14-DDX42 SAMD14 chr17 50124917 - DDX42 chr17 63815563 + Exonic hg38 BRCA TCGA-3C-AALI-01A 1 9 Out-of-frame Intra-chr q21.33 q23.3 Seq+ 82550 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD3-STXBP4 STARD3 chr17 39662344 + STXBP4 chr17 55072900 + Exonic hg38 BRCA TCGA-3C-AALI-01A 2 3 In-Frame Intra-chr q12 q22 Seq+ 82551 ChimerSeq TCGA FAWG TCGA_RNA-Seq DBF4B-LRRC37A11P DBF4B chr17 44750677 + LRRC37A11P chr17 39052865 + Exonic hg38 BRCA TCGA-3C-AALI-01A 1 4 CDS-5'UTR Intra-chr q21.31 q12 82552 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-PITPNC1 FBXL20 chr17 39401361 - PITPNC1 chr17 67692572 + Exonic hg38 BRCA TCGA-3C-AALI-01A 1000 1000 In-Frame Intra-chr q12 q24.2 Seq+ 82553 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPO11-GSTA1 SPO11 chr20 57335907 + GSTA1 chr6 52792987 - Exonic hg38 BRCA TCGA-3C-AALJ-01A 4 27 In-Frame Inter-chr q13.31 p12.2 Seq+ 82554 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSE1L-LETM2 CSE1L chr20 49046423 + LETM2 chr8 38387950 + Exonic hg38 BRCA TCGA-3C-AALJ-01A 3 7 5'UTR-5'UTR Inter-chr q13.13 p11.23 Seq+ 82555 ChimerSeq TCGA FAWG TCGA_RNA-Seq SARNP-BLOC1S1 SARNP chr12 55789075 - BLOC1S1 chr12 55719091 + Exonic hg38 BRCA TCGA-3C-AALJ-01A 4 1 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 82556 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM38-DNAJC5B RBM38 chr20 57393333 + DNAJC5B chr8 66056466 + Exonic hg38 BRCA TCGA-3C-AALJ-01A 1 9 CDS-5'UTR Inter-chr q13.31 Tumor suppressor gene q13.1 Seq+ 82557 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTPA-SNX11 TTPA chr8 63085818 - SNX11 chr17 48112031 + Exonic hg38 BRCA TCGA-3C-AALJ-01A 3 1 CDS-5'UTR Inter-chr q12.3 q21.32 Seq+ 82558 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFFL-NLK RFFL chr17 35089105 - NLK chr17 28168448 + Exonic hg38 BRCA TCGA-3C-AALK-01A 6 24 3'UTR-CDS Intra-chr q12 q11.2 CMGC:MAPK Seq+ 82559 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKAP1-NR1D1 SKAP1 chr17 48396680 - NR1D1 chr17 40100266 - Exonic hg38 BRCA TCGA-3C-AALK-01A 3 6 CDS-5'UTR Intra-chr q21.32 q21.1 Transcription factor Seq+ 82560 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF3-LTF ARHGEF3 chr3 56801703 - LTF chr3 46459819 - Exonic hg38 BRCA TCGA-5L-AAT0-01A 11 35 Out-of-frame Intra-chr p14.3 p21.31 Oncogene Tumor suppressor gene Transcription factor Seq+ 82561 ChimerSeq TCGA FAWG TCGA_RNA-Seq THAP12-ANO1 THAP12 chr11 76380748 - ANO1 chr11 70170887 + Exonic hg38 BRCA TCGA-5T-A9QA-01A 16 69 Out-of-frame Intra-chr q13.5 Transcription factor q13.3 82562 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-GDPD4 UVRAG chr11 75983513 + GDPD4 chr11 77287420 - Exonic hg38 BRCA TCGA-5T-A9QA-01A 1 4 CDS-5'UTR Intra-chr q13.5 Tumor suppressor gene q13.5 82563 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIB-HEATR5B NFIB chr9 14313482 - HEATR5B chr2 36981794 - Exonic hg38 BRCA TCGA-A1-A0SB-01A 63 276 Out-of-frame Inter-chr p22.3 Transcription factor p22.2 Seq+ 82564 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYB-NFIB MYB chr6 135200415 + NFIB chr9 14307520 - Exonic hg38 BRCA TCGA-A1-A0SB-01A 7 114 In-Frame Inter-chr q23.3 Oncogene Transcription factor p22.3 Transcription factor KB Pub Seq+ 82565 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIB-STRN NFIB chr9 14313482 - STRN chr2 36925208 - Exonic hg38 BRCA TCGA-A1-A0SB-01A 8 16 In-Frame Inter-chr p22.3 Transcription factor p22.2 Seq+ 82566 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHD4-FSIP1 EHD4 chr15 41919210 - FSIP1 chr15 39618245 - Exonic hg38 BRCA TCGA-A1-A0SB-01A 5 25 In-Frame Intra-chr q15.1 q14 Seq+ 82567 ChimerSeq TCGA FAWG TCGA_RNA-Seq HEATR5B-MYB HEATR5B chr2 36988646 - MYB chr6 135201639 + Exonic hg38 BRCA TCGA-A1-A0SB-01A 5 10 Out-of-frame Inter-chr p22.2 q23.3 Oncogene Transcription factor Seq+ 82568 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCM1-NAT1 PCM1 chr8 17986087 + NAT1 chr8 18170679 + Exonic hg38 BRCA TCGA-A1-A0SD-01A 4 7 5'UTR-5'UTR Intra-chr p22 p22 Seq+ 82569 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCM1-SLC6A2 PCM1 chr8 17986087 + SLC6A2 chr8 18170679 + Exonic hg38 BRCA TCGA-A1-A0SD-01A 1000 1000 5'UTR-5'UTR Intra-chr p22 q12.2 82570 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R12A-MGAT4C PPP1R12A chr12 79845302 - MGAT4C chr12 86049723 - Exonic hg38 BRCA TCGA-A1-A0SE-01A 12 20 CDS-5'UTR Intra-chr q21.31 Seq+ 82571 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGM2L1-UVRAG PGM2L1 chr11 74398051 - UVRAG chr11 75983387 + Exonic hg38 BRCA TCGA-A1-A0SE-01A 1 4 In-Frame Intra-chr q13.4 q13.5 Tumor suppressor gene Seq+ 82572 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGF1R-WDR93 IGF1R chr15 98708107 + WDR93 chr15 89701707 + Exonic hg38 BRCA TCGA-A1-A0SF-01A 4 11 CDS-5'UTR Intra-chr q26.3 TK:InsR Oncogene q26.1 Seq+ 82573 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENPP1-SEC63 ENPP1 chr6 131886724 + SEC63 chr6 107924932 - Exonic hg38 BRCA TCGA-A1-A0SG-01A 3 0 Out-of-frame Intra-chr q23.2 q21 Seq+ 82574 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC27-ST7L CDC27 chr17 47189146 - ST7L chr1 112600848 - Exonic hg38 BRCA TCGA-A1-A0SH-01A 2 45 Out-of-frame Inter-chr q21.32 p13.2 Seq+ 82575 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNN3-ALG14 CNN3 chr1 94926838 - ALG14 chr1 95027260 - Exonic hg38 BRCA TCGA-A1-A0SH-01A 4 7 In-Frame Intra-chr p21.3 p21.3 Seq+ 82576 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL1A1-HSP90AB1 COL1A1 chr17 50197732 - HSP90AB1 chr6 44250021 + Exonic hg38 BRCA TCGA-A1-A0SH-01A 1 12 Out-of-frame Inter-chr q21.33 Oncogene p21.1 Oncogene Seq+ 82577 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-INTS4 UVRAG chr11 75912039 + INTS4 chr11 77907810 - Exonic hg38 BRCA TCGA-A1-A0SJ-01A 41 125 In-Frame Intra-chr q13.5 Tumor suppressor gene q14.1 Seq+ 82578 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC2-CHD6 TANC2 chr17 63009626 + CHD6 chr20 41457428 - Exonic hg38 BRCA TCGA-A1-A0SJ-01A 40 69 Out-of-frame Inter-chr q23.2 q12 Seq+ 82579 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA5-MYRFL LAMA5 chr20 62362400 - MYRFL chr12 69879028 + Exonic hg38 BRCA TCGA-A1-A0SJ-01A 22 58 Out-of-frame Inter-chr q13.33 q15 Transcription factor 82580 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNT11-TSPAN8 WNT11 chr11 76206325 - TSPAN8 chr12 71157787 - Exonic hg38 BRCA TCGA-A1-A0SJ-01A 10 15 CDS-5'UTR Inter-chr q13.5 Tumor suppressor gene q21.1 Seq+ 82581 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP42-PGR ARHGAP42 chr11 100687832 + PGR chr11 101062752 - Exonic hg38 BRCA TCGA-A1-A0SJ-01A 8 17 In-Frame Intra-chr q22.1 q22.1 Tumor suppressor gene Transcription factor Seq+ 82582 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADNP-GHRH ADNP chr20 50930826 - GHRH chr20 37256908 - Exonic hg38 BRCA TCGA-A1-A0SJ-01A 5 26 5'UTR-5'UTR Intra-chr q13.13 Transcription factor q11.23 Seq+ 82583 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-NFS1 BCAS3 chr17 61034790 + NFS1 chr20 35674617 - Exonic hg38 BRCA TCGA-A1-A0SJ-01A 6 16 Out-of-frame Inter-chr q23.2 q11.22 Seq+ 82584 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFP91-NOX4 ZFP91 chr11 58584884 + NOX4 chr11 89355043 - Exonic hg38 BRCA TCGA-A1-A0SJ-01A 3 15 In-Frame Intra-chr q12.1 Transcription factor q14.3 Seq+ 82585 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTX4-CCDC102B DTX4 chr11 59192250 + CCDC102B chr18 69054030 + Exonic hg38 BRCA TCGA-A1-A0SJ-01A 4 10 In-Frame Inter-chr q12.1 q22.1 Seq+ 82586 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADNP-SYCP2 ADNP chr20 50902017 - SYCP2 chr20 59893593 - Exonic hg38 BRCA TCGA-A1-A0SJ-01A 2 12 In-Frame Intra-chr q13.13 Transcription factor q13.33 Seq+ 82587 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFC3H1-CDH4 ZFC3H1 chr12 71619315 - CDH4 chr20 61852754 + Exonic hg38 BRCA TCGA-A1-A0SJ-01A 3 5 CDS-3'UTR Inter-chr q21.1 q13.33 Tumor suppressor gene Seq+ 82588 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERAL1-DIDO1 ERAL1 chr17 28855317 + DIDO1 chr20 62882414 - Exonic hg38 BRCA TCGA-A1-A0SJ-01A 1 9 In-Frame Inter-chr q11.2 q13.33 Tumor suppressor gene Seq+ 82589 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIZ-ABHD13 KIZ chr20 21132159 + ABHD13 chr13 108229199 + Exonic hg38 BRCA TCGA-A1-A0SJ-01A 1 5 5'UTR-5'UTR Inter-chr p11.23 q33.3 82590 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS4-PTPRT INTS4 chr11 77955942 - PTPRT chr20 42885932 - Exonic hg38 BRCA TCGA-A1-A0SJ-01A 1 3 Out-of-frame Inter-chr q14.1 q13.11 Oncogene Tumor suppressor gene 82591 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM160B1-FANK1 FAM160B1 chr10 114846367 + FANK1 chr10 125973373 + Exonic hg38 BRCA TCGA-A1-A0SJ-01A 1 2 CDS-5'UTR Intra-chr q25.3 q26.2 82592 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM5A-ANO2 KDM5A chr12 318106 - ANO2 chr12 5599629 - Exonic hg38 BRCA TCGA-A1-A0SK-01A 98 280 In-Frame Intra-chr p13.33 Tumor suppressor gene p13.31 Seq+ 82593 ChimerSeq TCGA FAWG TCGA_RNA-Seq IP6K2-PRKAR2A IP6K2 chr3 48717157 - PRKAR2A chr3 48765349 - Exonic hg38 BRCA TCGA-A1-A0SK-01A 113 113 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 82594 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRF-F5 SRF chr6 43174113 + F5 chr1 169514459 - Exonic hg38 BRCA TCGA-A1-A0SK-01A 31 93 In-Frame Inter-chr p21.1 Transcription factor q24.2 Seq+ 82595 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD4-DTX1 CHD4 chr12 6581044 - DTX1 chr12 113077424 + Exonic hg38 BRCA TCGA-A1-A0SK-01A 20 46 In-Frame Intra-chr p13.31 q24.13 Seq+ 82596 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3C2G-PPFIBP1 PIK3C2G chr12 18399847 + PPFIBP1 chr12 27673767 + Exonic hg38 BRCA TCGA-A1-A0SK-01A 3 33 In-Frame Intra-chr p12.3 p11.23 Seq+ 82597 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB7A-APBA3 ZBTB7A chr19 4065430 - APBA3 chr19 3760301 - Exonic hg38 BRCA TCGA-A1-A0SK-01A 4 28 5'UTR-5'UTR Intra-chr p13.3 Transcription factor p13.3 Seq+ 82598 ChimerSeq TCGA FAWG TCGA_RNA-Seq HRAS-SCT HRAS chr11 532631 - SCT chr11 626530 - Exonic hg38 BRCA TCGA-A1-A0SK-01A 4 16 5'UTR-5'UTR Intra-chr p15.5 Oncogene Seq+ 82599 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIS3L2-SPHKAP DIS3L2 chr2 232300119 + SPHKAP chr2 228132085 - Exonic hg38 BRCA TCGA-A1-A0SK-01A 3 18 In-Frame Intra-chr q37.1 q36.3 Seq+ 82600 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEBL-TMEM26 NEBL chr10 21020117 - TMEM26 chr10 61416123 - Exonic hg38 BRCA TCGA-A1-A0SK-01A 1 11 CDS-3'UTR Intra-chr p12.31 q21.2 Seq+ 82601 ChimerSeq TCGA FAWG TCGA_RNA-Seq OBSCN-IGSF21 OBSCN chr1 228215098 + IGSF21 chr1 18227898 + Exonic hg38 BRCA TCGA-A1-A0SK-01A 2 7 In-Frame Intra-chr q42.13 p36.13 Seq+ 82602 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIPEP-C1QTNF9B MIPEP chr13 23879268 - C1QTNF9B chr13 23897006 - Exonic hg38 BRCA TCGA-A1-A0SK-01A 2 1 CDS-5'UTR Intra-chr q12.12 q12.12 82603 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS2-ZNF354C ADAMTS2 chr5 179343767 - ZNF354C chr5 179062015 + Exonic hg38 BRCA TCGA-A1-A0SK-01A 1 3 5'UTR-5'UTR Intra-chr q35.3 Transcription factor 82604 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMO3-EPS8 LMO3 chr12 16600655 - EPS8 chr12 15682972 - Exonic hg38 BRCA TCGA-A1-A0SK-01A 1 2 CDS-5'UTR Intra-chr p12.3 p12.3 82605 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK1-ACER3 TAOK1 chr17 29498521 + ACER3 chr11 76976289 + Exonic hg38 BRCA TCGA-A1-A0SM-01A 19 22 In-Frame Inter-chr q11.2 q13.5 Seq+ 82606 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOCS7-FLOT2 SOCS7 chr17 38377842 + FLOT2 chr17 28889026 - Exonic hg38 BRCA TCGA-A1-A0SM-01A 7 40 3'UTR-CDS Intra-chr q12 q11.2 Seq+ 82607 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-GDPD5 FBXL20 chr17 39301001 - GDPD5 chr11 75456816 - Exonic hg38 BRCA TCGA-A1-A0SM-01A 7 31 In-Frame Inter-chr q12 q13.5 Seq+ 82608 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD3-UVRAG STARD3 chr17 39653750 + UVRAG chr11 75888829 + Exonic hg38 BRCA TCGA-A1-A0SM-01A 4 41 In-Frame Inter-chr q12 q13.5 Tumor suppressor gene Seq+ 82609 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX52-PSMD3 DDX52 chr17 37620873 - PSMD3 chr17 39989739 + Exonic hg38 BRCA TCGA-A1-A0SM-01A 7 25 5'UTR-CDS Intra-chr q12 q21.1 Seq+ 82610 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARA-NARS2 RARA chr17 40331396 + NARS2 chr11 78571444 - Exonic hg38 BRCA TCGA-A1-A0SM-01A 2 42 Out-of-frame Inter-chr q21.2 Oncogene Transcription factor q14.1 Seq+ 82611 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARRB1-UVRAG ARRB1 chr11 75351588 - UVRAG chr11 76004005 + Exonic hg38 BRCA TCGA-A1-A0SM-01A 4 31 Out-of-frame Intra-chr q13.4 q13.5 Tumor suppressor gene Seq+ 82612 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACER3-THRSP ACER3 chr11 76861079 + THRSP chr11 78067659 + Exonic hg38 BRCA TCGA-A1-A0SM-01A 5 18 CDS-3'UTR Intra-chr q13.5 q14.1 Seq+ 82613 ChimerSeq TCGA FAWG TCGA_RNA-Seq NARS2-PLXDC1 NARS2 chr11 78528842 - PLXDC1 chr17 39139832 - Exonic hg38 BRCA TCGA-A1-A0SM-01A 1 33 Out-of-frame Inter-chr q14.1 q12 82614 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-LRTOMT UVRAG chr11 75912039 + LRTOMT chr11 72088297 + Exonic hg38 BRCA TCGA-A1-A0SM-01A 4 10 CDS-5'UTR Intra-chr q13.5 Tumor suppressor gene q13.4 Seq+ 82615 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNA13-PLEKHM1P1 GNA13 chr17 65053502 - PLEKHM1P1 chr17 64829249 - Exonic hg38 BRCA TCGA-A1-A0SM-01A 3 9 CDS-3'UTR Intra-chr q24.1 q24.1 82616 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSF1-PHF12 RSF1 chr11 77820528 - PHF12 chr17 28927063 - Exonic hg38 BRCA TCGA-A1-A0SM-01A 2 6 Out-of-frame Inter-chr q14.1 q11.2 Seq+ 82617 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM2A-MAP3K3 KDM2A chr11 67231960 + MAP3K3 chr17 63681766 + Exonic hg38 BRCA TCGA-A1-A0SN-01A 120 461 Out-of-frame Inter-chr q13.2 Transcription factor q23.3 STE:STE11 Seq+ 82618 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC2-STRADA TANC2 chr17 63009626 + STRADA chr17 63728413 - Exonic hg38 BRCA TCGA-A1-A0SN-01A 119 234 CDS-5'UTR Intra-chr q23.2 q23.3 Tumor suppressor gene Seq+ 82619 ChimerSeq TCGA FAWG TCGA_RNA-Seq MILR1-KCNJ2 MILR1 chr17 64460932 + KCNJ2 chr17 70174824 + Exonic hg38 BRCA TCGA-A1-A0SN-01A 66 270 CDS-5'UTR Intra-chr q23.3 q24.3 82620 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13-MILR1 MED13 chr17 62065140 - MILR1 chr17 64457400 + Exonic hg38 BRCA TCGA-A1-A0SN-01A 58 181 Out-of-frame Intra-chr q23.2 q23.3 82621 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KB1-TEX2 RPS6KB1 chr17 59912804 + TEX2 chr17 64214242 - Exonic hg38 BRCA TCGA-A1-A0SN-01A 43 140 5'UTR-5'UTR Intra-chr q23.1 Oncogene q23.3 Seq+ 82622 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBD1-CDK12 TUBD1 chr17 59866609 - CDK12 chr17 39511529 + Exonic hg38 BRCA TCGA-A1-A0SN-01A 15 174 Out-of-frame Intra-chr q23.1 q12 Oncogene Seq+ 82623 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX42-RPS6KB1 DDX42 chr17 63805175 + RPS6KB1 chr17 59910562 + Exonic hg38 BRCA TCGA-A1-A0SN-01A 35 86 In-Frame Intra-chr q23.3 q23.1 Oncogene Seq+ 82624 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD3-C11orf80 PSMD3 chr17 39981190 + C11orf80 chr11 66759043 + Exonic hg38 BRCA TCGA-A1-A0SN-01A 19 119 In-Frame Inter-chr q21.1 q13.2 Seq+ 82625 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13-KCNJ2 MED13 chr17 62065140 - KCNJ2 chr17 70174824 + Exonic hg38 BRCA TCGA-A1-A0SN-01A 25 63 CDS-5'UTR Intra-chr q23.2 q24.3 Seq+ 82626 ChimerSeq TCGA FAWG TCGA_RNA-Seq CADPS2-LMOD2 CADPS2 chr7 122885999 - LMOD2 chr7 123661860 + Exonic hg38 BRCA TCGA-A1-A0SN-01A 26 34 In-Frame Intra-chr q31.32 q31.32 Seq+ 82627 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLK2-KCNJ16 TLK2 chr17 62481206 + KCNJ16 chr17 70100658 + Exonic hg38 BRCA TCGA-A1-A0SN-01A 5 92 5'UTR-5'UTR Intra-chr q23.2 Other:TLK q24.3 Seq+ 82628 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOD-PFDN4 RHOD chr11 67066847 + PFDN4 chr20 54214351 + Exonic hg38 BRCA TCGA-A1-A0SN-01A 13 32 In-Frame Inter-chr q13.2 q13.2 Seq+ 82629 ChimerSeq TCGA FAWG TCGA_RNA-Seq SND1-GRM8 SND1 chr7 127721400 + GRM8 chr7 126904683 - Exonic hg38 BRCA TCGA-A1-A0SN-01A 9 23 Out-of-frame Intra-chr q32.1 q31.33 Oncogene Seq+ 82630 ChimerSeq TCGA FAWG TCGA_RNA-Seq APPBP2-HEATR6 APPBP2 chr17 60451880 - HEATR6 chr17 60057403 - Exonic hg38 BRCA TCGA-A1-A0SN-01A 7 19 In-Frame Intra-chr q23.2 q23.1 Seq+ 82631 ChimerSeq TCGA FAWG TCGA_RNA-Seq VMP1-KDM2A VMP1 chr17 59773885 + KDM2A chr11 67180079 + Exonic hg38 BRCA TCGA-A1-A0SN-01A 5 5 In-Frame Inter-chr q23.1 q13.2 Transcription factor Seq+ 82632 ChimerSeq TCGA FAWG TCGA_RNA-Seq VMP1-AP1S2 VMP1 chr17 59738947 + AP1S2 chrX 15831568 - Exonic hg38 BRCA TCGA-A1-A0SN-01A 5 4 In-Frame Inter-chr q23.1 p22.2 82633 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC47-GH1 CCDC47 chr17 63760914 - GH1 chr17 63918506 - Exonic hg38 BRCA TCGA-A1-A0SN-01A 1 18 Out-of-frame Intra-chr q23.3 q23.3 82634 ChimerSeq TCGA FAWG TCGA_RNA-Seq CABLES1-RBBP8 CABLES1 chr18 23136607 + RBBP8 chr18 22989221 + Exonic hg38 BRCA TCGA-A1-A0SN-01A 4 3 Out-of-frame Intra-chr q11.2 Tumor suppressor gene q11.2 Tumor suppressor gene Seq+ 82635 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM4-MTMR4 RBM4 chr11 66640123 + MTMR4 chr17 58496330 - Exonic hg38 BRCA TCGA-A1-A0SN-01A 3 6 Out-of-frame Inter-chr q13.2 Tumor suppressor gene q22 Seq+ 82636 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRRAP-PRKAR2B TRRAP chr7 98917679 + PRKAR2B chr7 107121952 + Exonic hg38 BRCA TCGA-A1-A0SN-01A 2 8 CDS-3'UTR Intra-chr q22.1 Atypical:PIKK Oncogene Seq+ 82637 ChimerSeq TCGA FAWG TCGA_RNA-Seq PILRB-MAGI2 PILRB chr7 100356883 + MAGI2 chr7 78195063 - Exonic hg38 BRCA TCGA-A1-A0SN-01A 1 9 5'UTR-CDS Intra-chr q22.1 q21.11 Seq+ 82638 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS2-AXIN2 INTS2 chr17 61911940 - AXIN2 chr17 65558736 - Exonic hg38 BRCA TCGA-A1-A0SN-01A 2 3 CDS-5'UTR Intra-chr q23.2 q24.1 Tumor suppressor gene Seq+ 82639 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1X-CASK TBL1X chrX 9501849 + CASK chrX 41853227 - Exonic hg38 BRCA TCGA-A1-A0SN-01A 1 6 5'UTR-CDS Intra-chr p22.31 p11.4 CAMK:CASK Seq+ 82640 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFATC2-MED24 NFATC2 chr20 51391084 - MED24 chr17 40054695 - Exonic hg38 BRCA TCGA-A1-A0SN-01A 1000 1000 Out-of-frame Inter-chr q13.2 Tumor suppressor gene Transcription factor q21.1 82641 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2Q1-HPS1 UBE2Q1 chr1 154558227 - HPS1 chr10 98427264 - Exonic hg38 BRCA TCGA-A1-A0SO-01A 26 40 Out-of-frame Inter-chr q21.3 q24.2 Seq+ 82642 ChimerSeq TCGA FAWG TCGA_RNA-Seq HPCAL1-CPSF3 HPCAL1 chr2 10396920 + CPSF3 chr2 9467707 + Exonic hg38 BRCA TCGA-A1-A0SO-01A 18 48 5'UTR-CDS Intra-chr p25.1 p25.1 Seq+ 82643 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS53-HS3ST5 VPS53 chr17 697418 - HS3ST5 chr6 114168462 - Exonic hg38 BRCA TCGA-A1-A0SO-01A 12 37 5'UTR-5'UTR Inter-chr Tumor suppressor gene q22.1 Seq+ 82644 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIXDC1-GAB2 DIXDC1 chr11 111937559 + GAB2 chr11 78280901 - Exonic hg38 BRCA TCGA-A1-A0SO-01A 10 33 In-Frame Intra-chr q23.1 q14.1 Seq+ 82645 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIP12-AGFG1 TRIP12 chr2 229921880 - AGFG1 chr2 227536901 + Exonic hg38 BRCA TCGA-A1-A0SO-01A 12 23 5'UTR-CDS Intra-chr q36.3 q36.3 Seq+ 82646 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX39B-ATP6V1G2 DDX39B chr6 31530921 - ATP6V1G2 chr6 31545766 - Exonic hg38 BRCA TCGA-A1-A0SO-01A 9 9 Out-of-frame Intra-chr 82647 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC2-RSPO3 HDAC2 chr6 113970857 - RSPO3 chr6 127148648 + Exonic hg38 BRCA TCGA-A1-A0SO-01A 7 2 In-Frame Intra-chr q21 q22.33 Seq+ 82648 ChimerSeq TCGA FAWG TCGA_RNA-Seq GDF11-BLOC1S1 GDF11 chr12 55743761 + BLOC1S1 chr12 55719091 + Exonic hg38 BRCA TCGA-A1-A0SO-01A 4 11 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 82649 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGBD2-KIRREL3 PGBD2 chr1 248906342 + KIRREL3 chr11 126473466 - Exonic hg38 BRCA TCGA-A1-A0SO-01A 6 2 5'UTR-CDS Inter-chr q44 q24.2 Seq+ 82650 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT1-RASSF8 CNOT1 chr16 58629728 - RASSF8 chr12 26064498 + Exonic hg38 BRCA TCGA-A1-A0SO-01A 3 12 5'UTR-CDS Inter-chr q21 p12.1 Tumor suppressor gene Seq+ 82651 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBK1-BCAR4 SBK1 chr16 28293300 + BCAR4 chr16 11821755 - Exonic hg38 BRCA TCGA-A1-A0SO-01A 1 13 5'UTR-3'UTR Intra-chr p12.1 p13.13 82652 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC42BPB-UNC79 CDC42BPB chr14 103056999 - UNC79 chr14 93467671 + Exonic hg38 BRCA TCGA-A1-A0SO-01A 2 8 CDS-3'UTR Intra-chr q32.32 Seq+ 82653 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC28A-WASF2 CCDC28A chr6 138776278 + WASF2 chr1 27428933 - Exonic hg38 BRCA TCGA-A1-A0SO-01A 3 1 CDS-5'UTR Inter-chr q24.1 p36.11 82654 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGZ-MELTF PIGZ chr3 196968687 - MELTF chr3 197006736 - Exonic hg38 BRCA TCGA-A1-A0SO-01A 2 5 5'UTR-CDS Intra-chr q29 q29 82655 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2CD2-ZBTB21 C2CD2 chr21 41912332 - ZBTB21 chr21 42002961 - Exonic hg38 BRCA TCGA-A1-A0SO-01A 2 4 CDS-5'UTR Intra-chr q22.3 q22.3 Transcription factor 82656 ChimerSeq TCGA FAWG TCGA_RNA-Seq KHDC1-NLK KHDC1 chr6 73291998 - NLK chr17 28122603 + Exonic hg38 BRCA TCGA-A1-A0SO-01A 2 3 In-Frame Inter-chr q13 q11.2 CMGC:MAPK Seq+ 82657 ChimerSeq TCGA FAWG TCGA_RNA-Seq NHLRC2-ATRNL1 NHLRC2 chr10 113858680 + ATRNL1 chr10 115727248 + Exonic hg38 BRCA TCGA-A1-A0SO-01A 2 1 Out-of-frame Intra-chr q25.3 q25.3 82658 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERC2-ARHGEF3 ERC2 chr3 56434351 - ARHGEF3 chr3 56882354 - Exonic hg38 BRCA TCGA-A1-A0SO-01A 1 4 In-Frame Intra-chr p14.3 p14.3 Seq+ 82659 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITSN1-KIAA1211 ITSN1 chr21 33642713 + KIAA1211 chr4 56179284 + Exonic hg38 BRCA TCGA-A1-A0SO-01A 1 4 5'UTR-5'UTR Inter-chr q22.11 q12 Seq+ 82660 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAP1-NDUFAF6 ADAP1 chr7 954396 - NDUFAF6 chr8 95031995 + Exonic hg38 BRCA TCGA-A1-A0SO-01A 1 3 Out-of-frame Inter-chr p22.3 q22.1 82661 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAALADL2-SLC25A3 NAALADL2 chr3 174864090 + SLC25A3 chr12 98597856 + Exonic hg38 BRCA TCGA-A1-A0SO-01A 1 2 Out-of-frame Inter-chr q26.31 q23.1 82662 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXW7-MGST2 FBXW7 chr4 152346930 - MGST2 chr4 139740212 + Exonic hg38 BRCA TCGA-A1-A0SP-01A 7 15 CDS-3'UTR Intra-chr q31.3 Oncogene Tumor suppressor gene q31.1 Seq+ 82663 ChimerSeq TCGA FAWG TCGA_RNA-Seq BICDL1-27 BICDL1 chr12 120093890 + 27 chr2 89969155 + Exonic hg38 BRCA TCGA-A1-A0SP-01A 10 0 Out-of-frame Inter-chr q24.23 82664 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTEN-WNK1 PTEN chr10 87925557 + WNK1 chr12 813642 + Exonic hg38 BRCA TCGA-A1-A0SP-01A 8 4 3'UTR-CDS Inter-chr q23.31 Oncogene Tumor suppressor gene p13.33 Seq+ 82665 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUBP1-UMODL1 NUBP1 chr16 10758027 + UMODL1 chr21 42088294 + Exonic hg38 BRCA TCGA-A1-A0SP-01A 3 15 In-Frame Inter-chr p13.13 q22.3 Seq+ 82666 ChimerSeq TCGA FAWG TCGA_RNA-Seq BORCS5-CCDC91 BORCS5 chr12 12357509 + CCDC91 chr12 28259364 + Exonic hg38 BRCA TCGA-A1-A0SP-01A 1 15 3'UTR-CDS Intra-chr p11.22 82667 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXN2-CABP2 TXN2 chr22 36480575 - CABP2 chr11 67521982 - Exonic hg38 BRCA TCGA-A1-A0SP-01A 1 6 Out-of-frame Inter-chr q12.3 q13.2 82668 ChimerSeq TCGA FAWG TCGA_RNA-Seq GULP1-NUP35 GULP1 chr2 188383889 + NUP35 chr2 183128287 + Exonic hg38 BRCA TCGA-A1-A0SP-01A 1 5 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 82669 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP5-MOGAT2 LRP5 chr11 68426187 + MOGAT2 chr11 75719992 + Exonic hg38 BRCA TCGA-A1-A0SQ-01A 16 136 In-Frame Intra-chr q13.2 q13.5 Seq+ 82670 ChimerSeq TCGA FAWG TCGA_RNA-Seq THAP12-MARK4 THAP12 chr11 76360956 - MARK4 chr19 45264684 + Exonic hg38 BRCA TCGA-A1-A0SQ-01A 7 111 Out-of-frame Inter-chr q13.5 Transcription factor q13.32 CAMK:CAMKL Oncogene 82671 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF154-KIR2DL1 ZNF154 chr19 57704853 - KIR2DL1 chr19 54773333 + Exonic hg38 BRCA TCGA-A1-A0SQ-01A 6 70 3'UTR-3'UTR Intra-chr q13.43 Transcription factor Seq+ 82672 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6R3-POLD3 PPP6R3 chr11 68460827 + POLD3 chr11 74594061 + Exonic hg38 BRCA TCGA-A1-A0SQ-01A 6 68 5'UTR-5'UTR Intra-chr q13.2 q13.4 Seq+ 82673 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPINT2-PAK1 SPINT2 chr19 38264998 + PAK1 chr11 77374365 - Exonic hg38 BRCA TCGA-A1-A0SQ-01A 11 33 In-Frame Inter-chr q13.2 Tumor suppressor gene q14.1 STE:STE20 Seq+ 82674 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK4-LYPD5 MARK4 chr19 45294452 + LYPD5 chr19 43799834 - Exonic hg38 BRCA TCGA-A1-A0SQ-01A 6 35 Out-of-frame Intra-chr q13.32 CAMK:CAMKL Oncogene q13.31 Seq+ 82675 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS4-PLAUR INTS4 chr11 77901421 - PLAUR chr19 43656640 - Exonic hg38 BRCA TCGA-A1-A0SQ-01A 4 22 Out-of-frame Inter-chr q14.1 q13.31 Seq+ 82676 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF814-IRF3 ZNF814 chr19 57876916 - IRF3 chr19 49659833 - Exonic hg38 BRCA TCGA-A1-A0SQ-01A 4 21 In-Frame Intra-chr q13.43 Transcription factor q13.33 Tumor suppressor gene Transcription factor Seq+ 82677 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC106-CD37 CCDC106 chr19 55649584 + CD37 chr19 49335714 + Exonic hg38 BRCA TCGA-A1-A0SQ-01A 2 27 Out-of-frame Intra-chr q13.42 q13.33 Seq+ 82678 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLAUR-AAMDC PLAUR chr19 43670066 - AAMDC chr11 77918061 + Exonic hg38 BRCA TCGA-A1-A0SQ-01A 2 21 CDS-3'UTR Inter-chr q13.31 q14.1 Seq+ 82679 ChimerSeq TCGA FAWG TCGA_RNA-Seq TENM4-NARS2 TENM4 chr11 78962143 - NARS2 chr11 78528936 - Exonic hg38 BRCA TCGA-A1-A0SQ-01A 5 8 CDS-5'UTR Intra-chr q14.1 q14.1 Seq+ 82680 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARFGAP1-SPAG4 ARFGAP1 chr20 63272920 + SPAG4 chr20 35619195 + Exonic hg38 BRCA TCGA-A1-A0SQ-01A 2 18 5'UTR-CDS Intra-chr q13.33 q11.22 Seq+ 82681 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF180-TOMM40 ZNF180 chr19 44497284 - TOMM40 chr19 44903030 + Exonic hg38 BRCA TCGA-A1-A0SQ-01A 1 15 Out-of-frame Intra-chr q13.31 Transcription factor q13.32 Seq+ 82682 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF671-PRRG2 ZNF671 chr19 57727391 - PRRG2 chr19 49588497 + Exonic hg38 BRCA TCGA-A1-A0SQ-01A 3 3 Out-of-frame Intra-chr q13.43 Transcription factor q13.33 Seq+ 82683 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2AK2-CEBPZ EIF2AK2 chr2 37122506 - CEBPZ chr2 37201903 - Exonic hg38 BRCA TCGA-A2-A04P-01A 71 157 Out-of-frame Intra-chr p22.2 p22.2 Transcription factor Seq+ 82684 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE7A-TRIM55 PDE7A chr8 65841371 - TRIM55 chr8 66149645 + Exonic hg38 BRCA TCGA-A2-A04P-01A 15 72 In-Frame Intra-chr q13.1 q13.1 Seq+ 82685 ChimerSeq TCGA FAWG TCGA_RNA-Seq IPO8-CDH13 IPO8 chr12 30656684 - CDH13 chr16 83180870 + Exonic hg38 BRCA TCGA-A2-A04P-01A 3 69 Out-of-frame Inter-chr p11.21 q23.3 Tumor suppressor gene Seq+ 82686 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF19-ANO7L1 ARHGEF19 chr1 16206948 - ANO7L1 chr1 16216061 - Exonic hg38 BRCA TCGA-A2-A04P-01A 5 13 Out-of-frame Intra-chr p36.13 p36.13 Seq+ 82687 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPLKIP-TRA2A MPLKIP chr7 40134229 - TRA2A chr7 23516528 - Exonic hg38 BRCA TCGA-A2-A04P-01A 1 6 Out-of-frame Intra-chr p14.1 p15.3 82688 ChimerSeq TCGA FAWG TCGA_RNA-Seq DUS1L-RPL13A DUS1L chr17 82058781 - RPL13A chr19 49491040 + Exonic hg38 BRCA TCGA-A2-A04P-01A 2 1 In-Frame Inter-chr q25.3 q13.33 Seq+ 82689 ChimerSeq TCGA FAWG TCGA_RNA-Seq EYA3-POP4 EYA3 chr1 27988535 - POP4 chr19 29613871 + Exonic hg38 BRCA TCGA-A2-A04P-01A 1 4 In-Frame Inter-chr p35.3 q12 Seq+ 82690 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR45B-RAB40B WDR45B chr17 82643949 - RAB40B chr17 82664556 - Exonic hg38 BRCA TCGA-A2-A04P-01A 1 4 In-Frame Intra-chr q25.3 q25.3 Seq+ 82691 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMG1-MYH11 SMG1 chr16 18832943 - MYH11 chr16 15704126 - Exonic hg38 BRCA TCGA-A2-A04Q-01A 45 123 Out-of-frame Intra-chr p12.3 Atypical:PIKK Oncogene Seq+ 82692 ChimerSeq TCGA FAWG TCGA_RNA-Seq NETO2-CHD9 NETO2 chr16 47122657 - CHD9 chr16 53121300 + Exonic hg38 BRCA TCGA-A2-A04Q-01A 1 18 CDS-5'UTR Intra-chr q12.1 q12.2 82693 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF462-DNAJC1 ZNF462 chr9 106863355 + DNAJC1 chr10 21806099 - Exonic hg38 BRCA TCGA-A2-A04T-01A 10 39 5'UTR-CDS Inter-chr q31.2 Transcription factor p12.31 Seq+ 82694 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKL2-SNX29 MKL2 chr16 14240484 + SNX29 chr16 12027320 + Exonic hg38 BRCA TCGA-A2-A04T-01A 11 18 Out-of-frame Intra-chr p13.12 p13.13 82695 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPR1-KIAA1614 XPR1 chr1 180632270 + KIAA1614 chr1 180938555 + Exonic hg38 BRCA TCGA-A2-A04T-01A 6 12 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 82696 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0319L-YTHDF2 KIAA0319L chr1 35470863 - YTHDF2 chr1 28768929 + Exonic hg38 BRCA TCGA-A2-A04T-01A 5 5 In-Frame Intra-chr p34.3 p35.3 82697 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCNN1G-COL27A1 SCNN1G chr16 23197427 + COL27A1 chr9 114162715 + Exonic hg38 BRCA TCGA-A2-A04T-01A 2 16 3'UTR-CDS Inter-chr p12.2 q32 Seq+ 82698 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF12-TEX9 TCF12 chr15 56921098 + TEX9 chr15 56365579 + Exonic hg38 BRCA TCGA-A2-A04T-01A 1 17 Out-of-frame Intra-chr q21.3 Oncogene Transcription factor q21.3 Seq+ 82699 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNTLN-COQ8B CNTLN chr9 17143376 + COQ8B chr19 40714635 - Exonic hg38 BRCA TCGA-A2-A04T-01A 4 2 CDS-5'UTR Inter-chr p22.2 q13.2 82700 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP6-SLC35A1 SENP6 chr6 75602576 + SLC35A1 chr6 87500508 + Exonic hg38 BRCA TCGA-A2-A04T-01A 2 7 Out-of-frame Intra-chr q14.1 q15 Seq+ 82701 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK1D-SECTM1 CSNK1D chr17 82248875 - SECTM1 chr17 82327292 - Exonic hg38 BRCA TCGA-A2-A04T-01A 1 3 CDS-5'UTR Intra-chr q25.3 q25.3 Seq+ 82702 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELL-SMIM7 ELL chr19 18521921 - SMIM7 chr19 16647261 - Exonic hg38 BRCA TCGA-A2-A04U-01A 17 94 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 82703 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDH1-COMMD1 MDH1 chr2 63594586 + COMMD1 chr2 62000701 + Exonic hg38 BRCA TCGA-A2-A04U-01A 10 97 In-Frame Intra-chr p15 p15 Seq+ 82704 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSH2-SLC3A1 MSH2 chr2 47410372 + SLC3A1 chr2 44312586 + Exonic hg38 BRCA TCGA-A2-A04U-01A 17 42 In-Frame Intra-chr p21 Oncogene Tumor suppressor gene p21 Seq+ 82705 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSD3-PAGE4 PSD3 chr8 19013563 - PAGE4 chrX 49830399 + Exonic hg38 BRCA TCGA-A2-A04U-01A 10 41 CDS-5'UTR Inter-chr p22 p11.23 Seq+ 82706 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK1-PLPP4 DOCK1 chr10 126990603 + PLPP4 chr10 120503818 + Exonic hg38 BRCA TCGA-A2-A04U-01A 4 64 In-Frame Intra-chr q26.2 q26.12 82707 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYLK-CCDC14 MYLK chr3 123793677 - CCDC14 chr3 123897613 - Exonic hg38 BRCA TCGA-A2-A04U-01A 7 31 CDS-3'UTR Intra-chr q21.1 q21.1 Seq+ 82708 ChimerSeq TCGA FAWG TCGA_RNA-Seq LSM14A-FXYD3 LSM14A chr19 34215661 + FXYD3 chr19 35119168 + Exonic hg38 BRCA TCGA-A2-A04U-01A 7 20 3'UTR-CDS Intra-chr q13.12 Seq+ 82709 ChimerSeq TCGA FAWG TCGA_RNA-Seq INSIG1-DPP6 INSIG1 chr7 155302846 + DPP6 chr7 154566842 + Exonic hg38 BRCA TCGA-A2-A04U-01A 7 13 In-Frame Intra-chr q36.3 Seq+ 82710 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGF13-NLRP3 FGF13 chrX 138857512 - NLRP3 chr1 247448405 + Exonic hg38 BRCA TCGA-A2-A04U-01A 5 17 Out-of-frame Inter-chr q27.1 q44 Seq+ 82711 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAA25-TBX5 NAA25 chr12 112081060 - TBX5 chr12 114356106 - Exonic hg38 BRCA TCGA-A2-A04U-01A 6 13 Out-of-frame Intra-chr q24.13 q24.21 Tumor suppressor gene Transcription factor Seq+ 82712 ChimerSeq TCGA FAWG TCGA_RNA-Seq POGZ-GBA POGZ chr1 151423397 - GBA chr1 155241180 - Exonic hg38 BRCA TCGA-A2-A04U-01A 4 16 CDS-5'UTR Intra-chr q21.3 Seq+ 82713 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIC-WDR18 NFIC chr19 3425177 + WDR18 chr19 989762 + Exonic hg38 BRCA TCGA-A2-A04U-01A 4 12 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 82714 ChimerSeq TCGA FAWG TCGA_RNA-Seq RWDD3-CCDC18 RWDD3 chr1 95239909 + CCDC18 chr1 93246105 + Exonic hg38 BRCA TCGA-A2-A04U-01A 3 15 Out-of-frame Intra-chr p21.3 p22.1 Seq+ 82715 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYH9-PLA2G6 MYH9 chr22 36387807 - PLA2G6 chr22 38169471 - Exonic hg38 BRCA TCGA-A2-A04U-01A 4 10 5'UTR-5'UTR Intra-chr q12.3 Oncogene Tumor suppressor gene q13.1 Seq+ 82716 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAT1-ITPR2 BCAT1 chr12 24948927 - ITPR2 chr12 26340328 - Exonic hg38 BRCA TCGA-A2-A04U-01A 3 9 In-Frame Intra-chr p12.1 p11.23 Seq+ 82717 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE7A-COPS5 PDE7A chr8 65724255 - COPS5 chr8 67045960 - Exonic hg38 BRCA TCGA-A2-A04U-01A 3 9 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 82718 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMG6-NXN SMG6 chr17 2172658 - NXN chr17 801131 - Exonic hg38 BRCA TCGA-A2-A04U-01A 3 9 In-Frame Intra-chr p13.3 p13.3 Seq+ 82719 ChimerSeq TCGA FAWG TCGA_RNA-Seq URB1-TMEM50B URB1 chr21 32363156 - TMEM50B chr21 33432802 - Exonic hg38 BRCA TCGA-A2-A04U-01A 3 7 CDS-5'UTR Intra-chr q22.11 Seq+ 82720 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC9-TSTA3 TRAPPC9 chr8 139885879 - TSTA3 chr8 143614915 - Exonic hg38 BRCA TCGA-A2-A04U-01A 3 6 CDS-5'UTR Intra-chr q24.3 Seq+ 82721 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELF1-TYRL CELF1 chr11 47565274 - TYRL chr11 49405314 - Exonic hg38 BRCA TCGA-A2-A04U-01A 2 9 Out-of-frame Intra-chr p11.2 p11.12 82722 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2B2-CIDECP ATP2B2 chr3 10534039 - CIDECP chr3 10023747 - Exonic hg38 BRCA TCGA-A2-A04U-01A 1 12 Out-of-frame Intra-chr p25.3 p25.3 82723 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTBP2-CASQ1 PTBP2 chr1 96806958 + CASQ1 chr1 160195012 + Exonic hg38 BRCA TCGA-A2-A04U-01A 3 4 Out-of-frame Intra-chr p21.3 q23.2 Seq+ 82724 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAGI3-RAP1A MAGI3 chr1 113391349 + RAP1A chr1 111703336 + Exonic hg38 BRCA TCGA-A2-A04U-01A 2 7 Out-of-frame Intra-chr p13.2 p13.2 Tumor suppressor gene Seq+ 82725 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRLR-KDM3B PRLR chr5 35230268 - KDM3B chr5 138372674 + Exonic hg38 BRCA TCGA-A2-A04U-01A 1 9 5'UTR-CDS Intra-chr p13.2 q31.2 Tumor suppressor gene Seq+ 82726 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIAL1-CUZD1 TIAL1 chr10 119596434 - CUZD1 chr10 122846220 - Exonic hg38 BRCA TCGA-A2-A04U-01A 1 9 5'UTR-5'UTR Intra-chr q26.11 q26.13 Seq+ 82727 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCK-UGT2B25P DCK chr4 70998182 + UGT2B25P chr4 69401804 + Exonic hg38 BRCA TCGA-A2-A04U-01A 2 4 Out-of-frame Intra-chr q13.3 q13.2 82728 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOB1B-UGT2B25P MOB1B chr4 70998182 + UGT2B25P chr4 69401804 + Exonic hg38 BRCA TCGA-A2-A04U-01A 2 4 Out-of-frame Intra-chr q13.3 Tumor suppressor gene q13.2 82729 ChimerSeq TCGA FAWG TCGA_RNA-Seq UQCC1-KIAA1755 UQCC1 chr20 35366557 - KIAA1755 chr20 38228240 - Exonic hg38 BRCA TCGA-A2-A04U-01A 2 4 In-Frame Intra-chr q11.22 q11.23 82730 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHRM3-ERICH6 CHRM3 chr1 239632286 + ERICH6 chr3 150660155 - Exonic hg38 BRCA TCGA-A2-A04U-01A 1 6 5'UTR-CDS Inter-chr q43 q25.1 82731 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABI2-FAM117B ABI2 chr2 203417081 + FAM117B chr2 202695881 + Exonic hg38 BRCA TCGA-A2-A04U-01A 1 5 In-Frame Intra-chr q33.2 Tumor suppressor gene q33.2 82732 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF236-RFX3 ZNF236 chr18 76947652 + RFX3 chr9 3228889 - Exonic hg38 BRCA TCGA-A2-A04U-01A 1 4 In-Frame Inter-chr q23 Transcription factor p24.2 Transcription factor 82733 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLGA4-STAC GOLGA4 chr3 37355187 + STAC chr3 36443364 + Exonic hg38 BRCA TCGA-A2-A04U-01A 1 1 In-Frame Intra-chr p22.2 p22.3 82734 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITSN2-HADHA ITSN2 chr2 24270671 - HADHA chr2 26215175 - Exonic hg38 BRCA TCGA-A2-A04U-01A 1 1 Out-of-frame Intra-chr p23.3 p23.3 82735 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM3C-CADPS2 FAM3C chr7 121396162 - CADPS2 chr7 122325581 - Exonic hg38 BRCA TCGA-A2-A04U-01A 1000 1000 5'UTR-CDS Intra-chr q31.31 q31.32 Seq+ 82736 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP7-ECHDC1 MAP7 chr6 136550342 - ECHDC1 chr6 127290277 - Exonic hg38 BRCA TCGA-A2-A04V-01A 19 36 Out-of-frame Intra-chr q23.3 q22.33 Seq+ 82737 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-MYEOV SHANK2 chr11 70659828 - MYEOV chr11 69341510 + Exonic hg38 BRCA TCGA-A2-A04V-01A 3 11 3'UTR-3'UTR Intra-chr q13.4 q13.3 82738 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF217-PRDM1 RNF217 chr6 124963426 + PRDM1 chr6 106104825 + Exonic hg38 BRCA TCGA-A2-A04V-01A 2 9 Out-of-frame Intra-chr q22.31 q21 Oncogene Tumor suppressor gene Transcription factor Seq+ 82739 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRDM1-SLC22A16 PRDM1 chr6 106106499 + SLC22A16 chr6 110457017 - Exonic hg38 BRCA TCGA-A2-A04V-01A 1 5 Out-of-frame Intra-chr q21 Oncogene Tumor suppressor gene Transcription factor q21 Seq+ 82740 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC35B1-IGFBP4 SLC35B1 chr17 49706965 - IGFBP4 chr17 40452985 + Exonic hg38 BRCA TCGA-A2-A04W-01A 36 106 In-Frame Intra-chr q21.33 q21.2 Tumor suppressor gene Seq+ 82741 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPEPPS-FAM117A NPEPPS chr17 47545993 + FAM117A chr17 49732720 - Exonic hg38 BRCA TCGA-A2-A04W-01A 37 39 In-Frame Intra-chr q21.32 q21.33 Seq+ 82742 ChimerSeq TCGA FAWG TCGA_RNA-Seq PREP-DCBLD1 PREP chr6 105323665 - DCBLD1 chr6 117503767 + Exonic hg38 BRCA TCGA-A2-A04W-01A 9 36 Out-of-frame Intra-chr q21 q22.1 Seq+ 82743 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC6-FAM131C TTC6 chr14 37739155 + FAM131C chr1 16062534 - Exonic hg38 BRCA TCGA-A2-A04W-01A 6 31 Out-of-frame Inter-chr q21.1 p36.13 82744 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSH2-SLC35B1 SSH2 chr17 29630780 - SLC35B1 chr17 49701510 - Exonic hg38 BRCA TCGA-A2-A04W-01A 5 26 3'UTR-CDS Intra-chr q11.2 q21.33 Seq+ 82745 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARA-CDK12 RARA chr17 40318448 + CDK12 chr17 39490557 + Exonic hg38 BRCA TCGA-A2-A04W-01A 5 24 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q12 Oncogene Seq+ 82746 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPF2-CDK12 WIPF2 chr17 40265146 + CDK12 chr17 39544249 + Exonic hg38 BRCA TCGA-A2-A04W-01A 5 8 CDS-3'UTR Intra-chr q21.2 q12 Oncogene Seq+ 82747 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACOT7-TTC34 ACOT7 chr1 6393257 - TTC34 chr1 2645563 - Exonic hg38 BRCA TCGA-A2-A04W-01A 2 10 CDS-5'UTR Intra-chr p36.31 Seq+ 82748 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAN1A1-ARHGAP18 MAN1A1 chr6 119290683 - ARHGAP18 chr6 129618852 - Exonic hg38 BRCA TCGA-A2-A04W-01A 2 10 In-Frame Intra-chr q22.31 q22.33 Seq+ 82749 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAN1A1-LCOR MAN1A1 chr6 119306896 - LCOR chr10 96907265 + Exonic hg38 BRCA TCGA-A2-A04W-01A 2 3 CDS-5'UTR Inter-chr q22.31 q24.1 Transcription factor Seq+ 82750 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED23-BEND3 MED23 chr6 131624865 - BEND3 chr6 107099296 - Exonic hg38 BRCA TCGA-A2-A04W-01A 2 3 CDS-5'UTR Intra-chr q23.2 q21 Seq+ 82751 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC35B1-CORO6 SLC35B1 chr17 49702858 - CORO6 chr17 29621484 - Exonic hg38 BRCA TCGA-A2-A04W-01A 1 4 CDS-5'UTR Intra-chr q21.33 q11.2 82752 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARFGEF3-TAAR6 ARFGEF3 chr6 138317319 + TAAR6 chr6 132570322 + Exonic hg38 BRCA TCGA-A2-A04W-01A 1000 1000 CDS-5'UTR Intra-chr q23.3 q23.2 82753 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1D-SSH2 MYO1D chr17 32653843 - SSH2 chr17 29848929 - Exonic hg38 BRCA TCGA-A2-A04X-01A 13 8 In-Frame Intra-chr q11.2 q11.2 Seq+ 82754 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF587-ZSCAN4 ZNF587 chr19 57850071 + ZSCAN4 chr19 57676041 + Exonic hg38 BRCA TCGA-A2-A04X-01A 12 8 CDS-5'UTR Intra-chr q13.43 Transcription factor q13.43 Transcription factor Seq+ 82755 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX27-ADAR SNX27 chr1 151639119 + ADAR chr1 154602626 - Exonic hg38 BRCA TCGA-A2-A04X-01A 5 30 In-Frame Intra-chr q21.3 q21.3 Seq+ 82756 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1D-FCMR MYO1D chr17 32653843 - FCMR chr1 206905147 - Exonic hg38 BRCA TCGA-A2-A04X-01A 5 13 In-Frame Inter-chr q11.2 q32.1 82757 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF13-CASC8 DCAF13 chr8 103421082 + CASC8 chr8 127290060 - Exonic hg38 BRCA TCGA-A2-A04Y-01A 97 410 CDS-3'UTR Intra-chr q22.3 q24.21 82758 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-RGS22 PVT1 chr8 127939676 + RGS22 chr8 100008569 - Exonic hg38 BRCA TCGA-A2-A04Y-01A 37 154 5'UTR-CDS Intra-chr q24.21 q22.2 Seq+ 82759 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP12-VPS13B LRP12 chr8 104588819 - VPS13B chr8 99013760 + Exonic hg38 BRCA TCGA-A2-A04Y-01A 11 10 CDS-5'UTR Intra-chr q22.3 q22.2 Seq+ 82760 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSK3B-LSAMP GSK3B chr3 119905755 - LSAMP chr3 116444955 - Exonic hg38 BRCA TCGA-A2-A04Y-01A 1 4 In-Frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q13.31 Tumor suppressor gene Seq+ 82761 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKHD1-TIAM2 ANKHD1 chr5 140449305 + TIAM2 chr6 155244011 + Exonic hg38 BRCA TCGA-A2-A0CK-01A 2 11 In-Frame Inter-chr q31.3 q25.2 Seq+ 82762 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLSTN2-PCOLCE2 CLSTN2 chr3 140566210 + PCOLCE2 chr3 142821045 - Exonic hg38 BRCA TCGA-A2-A0CL-01A 36 184 In-Frame Intra-chr q23 q23 Seq+ 82763 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLS1-CLDN18 PLS1 chr3 142596509 + CLDN18 chr3 138023658 + Exonic hg38 BRCA TCGA-A2-A0CL-01A 4 109 5'UTR-CDS Intra-chr q23 q22.3 Seq+ 82764 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KB2-VSIR RPS6KB2 chr11 67428623 + VSIR chr10 71755466 - Exonic hg38 BRCA TCGA-A2-A0CL-01A 12 30 Out-of-frame Inter-chr q13.2 q22.1 82765 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANK3-CDK1 ANK3 chr10 60134271 - CDK1 chr10 60780141 + Exonic hg38 BRCA TCGA-A2-A0CL-01A 6 14 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 82766 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL25A1-MCUB COL25A1 chr4 108841695 - MCUB chr4 109648484 + Exonic hg38 BRCA TCGA-A2-A0CL-01A 6 13 3'UTR-CDS Intra-chr q25 q25 82767 ChimerSeq TCGA FAWG TCGA_RNA-Seq GK5-MBNL1 GK5 chr3 142213526 - MBNL1 chr3 152414941 + Exonic hg38 BRCA TCGA-A2-A0CL-01A 7 8 Out-of-frame Intra-chr q23 q25.1 Seq+ 82768 ChimerSeq TCGA FAWG TCGA_RNA-Seq TACC2-MICU1 TACC2 chr10 121989488 + MICU1 chr10 72375872 - Exonic hg38 BRCA TCGA-A2-A0CL-01A 5 12 5'UTR-CDS Intra-chr q26.13 q22.1 Seq+ 82769 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAB2-THRSP GAB2 chr11 78280601 - THRSP chr11 78067659 + Exonic hg38 BRCA TCGA-A2-A0CL-01A 4 14 CDS-3'UTR Intra-chr q14.1 q14.1 Seq+ 82770 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRK2-POLD4 GRK2 chr11 67266812 + POLD4 chr11 67353077 - Exonic hg38 BRCA TCGA-A2-A0CL-01A 1 12 Out-of-frame Intra-chr q13.2 q13.2 82771 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATR-DBR1 ATR chr3 142578646 - DBR1 chr3 138173626 - Exonic hg38 BRCA TCGA-A2-A0CL-01A 2 5 In-Frame Intra-chr q23 Atypical:PIKK Oncogene Tumor suppressor gene q22.3 Seq+ 82772 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRLS1-CES5A CRLS1 chr20 6034555 + CES5A chr16 55869744 - Exonic hg38 BRCA TCGA-A2-A0CL-01A 2 5 5'UTR-5'UTR Inter-chr p12.3 q12.2 Seq+ 82773 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP10-SPATA5 ARHGAP10 chr4 147857654 + SPATA5 chr4 123313888 + Exonic hg38 BRCA TCGA-A2-A0CL-01A 1 4 In-Frame Intra-chr q31.23 q28.1 82774 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS4-GAB2 INTS4 chr11 77883832 - GAB2 chr11 78227051 - Exonic hg38 BRCA TCGA-A2-A0CL-01A 1 4 Out-of-frame Intra-chr q14.1 q14.1 KB Seq+ 82775 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCC2-TSPAN14 ABCC2 chr10 99792359 + TSPAN14 chr10 80504728 + Exonic hg38 BRCA TCGA-A2-A0CL-01A 1 2 In-Frame Intra-chr q24.2 q23.1 82776 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE3C-DNAJB6 UBE3C chr7 157163863 + DNAJB6 chr7 157363161 + Exonic hg38 BRCA TCGA-A2-A0CM-01A 3 47 Out-of-frame Intra-chr q36.3 q36.3 Seq+ 82777 ChimerSeq TCGA FAWG TCGA_RNA-Seq VGLL4-FXR1 VGLL4 chr3 11702971 - FXR1 chr3 180933334 + Exonic hg38 BRCA TCGA-A2-A0CM-01A 3 17 Out-of-frame Intra-chr p25.2 q26.33 Seq+ 82778 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R3A-PCCB PPP2R3A chr3 135965849 + PCCB chr3 136255856 + Exonic hg38 BRCA TCGA-A2-A0CM-01A 3 10 5'UTR-CDS Intra-chr q22.2 q22.3 Seq+ 82779 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMG1-RPS15A SMG1 chr16 18925950 - RPS15A chr16 18789118 - Exonic hg38 BRCA TCGA-A2-A0CM-01A 2 1 CDS-5'UTR Intra-chr p12.3 Atypical:PIKK p12.3 Seq+ 82780 ChimerSeq TCGA FAWG TCGA_RNA-Seq IRF3-IGHJ4 IRF3 chr19 49663649 - IGHJ4 chr14 105864257 - Exonic hg38 BRCA TCGA-A2-A0CO-01A 13 0 Out-of-frame Inter-chr q13.33 Tumor suppressor gene Transcription factor 82781 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK13-CLDN12 CDK13 chr7 40063100 + CLDN12 chr7 90405519 + Exonic hg38 BRCA TCGA-A2-A0CO-01A 2 1 CDS-5'UTR Intra-chr p14.1 q21.13 Seq+ 82782 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2A3-FGF3 ATP2A3 chr17 3929328 - FGF3 chr11 69810700 - Exonic hg38 BRCA TCGA-A2-A0CT-01A 38 108 In-Frame Inter-chr p13.2 q13.3 Seq+ 82783 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP44-DNAH2 ARHGAP44 chr17 12789891 + DNAH2 chr17 7801578 + Exonic hg38 BRCA TCGA-A2-A0CT-01A 2 12 In-Frame Intra-chr p12 p13.1 Seq+ 82784 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANGRF-LRP5 RANGRF chr17 8289414 + LRP5 chr11 68409914 + Exonic hg38 BRCA TCGA-A2-A0CT-01A 1 13 In-Frame Inter-chr p13.1 q13.2 82785 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYCP2-ZMYND8 SYCP2 chr20 59891990 - ZMYND8 chr20 47298947 - Exonic hg38 BRCA TCGA-A2-A0CT-01A 1 10 In-Frame Intra-chr q13.33 q13.12 Seq+ 82786 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP5-C11orf80 LRP5 chr11 68416527 + C11orf80 chr11 66759043 + Exonic hg38 BRCA TCGA-A2-A0CT-01A 1 2 Out-of-frame Intra-chr q13.2 q13.2 82787 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHB-LSM1 PHB chr17 49413177 - LSM1 chr8 38172033 - Exonic hg38 BRCA TCGA-A2-A0CU-01A 69 141 In-Frame Inter-chr q21.33 Tumor suppressor gene p11.23 Seq+ 82788 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLLT3-SLC28A3 MLLT3 chr9 20456704 - SLC28A3 chr9 84313454 - Exonic hg38 BRCA TCGA-A2-A0CU-01A 1 8 In-Frame Intra-chr p21.3 q21.33 Seq+ 82789 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGD3-NOL8 FGD3 chr9 93022389 + NOL8 chr9 92324209 - Exonic hg38 BRCA TCGA-A2-A0CU-01A 2 2 CDS-5'UTR Intra-chr q22.31 q22.31 82790 ChimerSeq TCGA FAWG TCGA_RNA-Seq PABPC1-CNGB3 PABPC1 chr8 100704297 - CNGB3 chr8 86611671 - Exonic hg38 BRCA TCGA-A2-A0CU-01A 2 2 3'UTR-CDS Intra-chr q22.3 q21.3 82791 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBX3-GARS CBX3 chr7 26201826 + GARS chr7 30626234 + Exonic hg38 BRCA TCGA-A2-A0CW-01A 292 717 5'UTR-CDS Intra-chr p15.2 p14.3 Seq+ 82792 ChimerSeq TCGA FAWG TCGA_RNA-Seq THRB-LMCD1 THRB chr3 24143501 - LMCD1 chr3 8532737 + Exonic hg38 BRCA TCGA-A2-A0CW-01A 11 33 In-Frame Intra-chr p24.2 Tumor suppressor gene Transcription factor p25.3 Seq+ 82793 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNN3-DCST2 KCNN3 chr1 154822089 - DCST2 chr1 155026715 - Exonic hg38 BRCA TCGA-A2-A0CW-01A 7 19 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 82794 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAB39L-EXOSC8 CAB39L chr13 49344179 - EXOSC8 chr13 37002488 + Exonic hg38 BRCA TCGA-A2-A0CW-01A 7 4 In-Frame Intra-chr q14.2 q13.3 Seq+ 82795 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC37A1-NT5C3A SLC37A1 chr21 42554142 + NT5C3A chr7 33017601 - Exonic hg38 BRCA TCGA-A2-A0CW-01A 2 19 Out-of-frame Inter-chr q22.3 p14.3 82796 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYRK1A-BRWD1 DYRK1A chr21 37420384 + BRWD1 chr21 39202545 - Exonic hg38 BRCA TCGA-A2-A0CW-01A 2 12 Out-of-frame Intra-chr q22.13 CMGC:DYRK q22.2 Seq+ 82797 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK4-CYP2A6 PAK4 chr19 39125919 + CYP2A6 chr19 40848763 - Exonic hg38 BRCA TCGA-A2-A0CW-01A 3 5 5'UTR-CDS Intra-chr q13.2 STE:STE20 q13.2 Seq+ 82798 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRWD1-DYRK1A BRWD1 chr21 39212666 - DYRK1A chr21 37472684 + Exonic hg38 BRCA TCGA-A2-A0CW-01A 1 12 Out-of-frame Intra-chr q22.2 q22.13 CMGC:DYRK Seq+ 82799 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCLK1-RCBTB1 DCLK1 chr13 35871224 - RCBTB1 chr13 49534262 - Exonic hg38 BRCA TCGA-A2-A0CW-01A 1 6 Out-of-frame Intra-chr q13.3 CAMK:DCAMKL q14.2 Seq+ 82800 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAPGEF5-NPY RAPGEF5 chr7 22125604 - NPY chr7 24289499 + Exonic hg38 BRCA TCGA-A2-A0CW-01A 1 4 Out-of-frame Intra-chr p15.3 p15.3 Seq+ 82801 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOL7-1 NOL7 chr6 13617801 + 1 chr6 11105630 - Exonic hg38 BRCA TCGA-A2-A0CX-01A 61 261 CDS-5'UTR Intra-chr p23 Tumor suppressor gene 82802 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIVEP1-OFCC1 HIVEP1 chr6 12008875 + OFCC1 chr6 10159499 - Exonic hg38 BRCA TCGA-A2-A0CX-01A 15 13 Out-of-frame Intra-chr p24.1 Tumor suppressor gene Transcription factor p24.3 Seq+ 82803 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC16A-LHX3 SEC16A chr9 136468415 - LHX3 chr9 136200753 - Exonic hg38 BRCA TCGA-A2-A0CX-01A 6 47 In-Frame Intra-chr q34.3 q34.3 Transcription factor Seq+ 82804 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD3-EPOP PSMD3 chr17 39986712 + EPOP chr17 38673251 - Exonic hg38 BRCA TCGA-A2-A0CX-01A 6 42 CDS-5'UTR Intra-chr q21.1 82805 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNA2D3-FOXP1 CACNA2D3 chr3 54764351 + FOXP1 chr3 71001059 - Exonic hg38 BRCA TCGA-A2-A0CX-01A 11 18 Out-of-frame Intra-chr p21.1 Tumor suppressor gene p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 82806 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM19A4-CACNA2D3 FAM19A4 chr3 68932240 - CACNA2D3 chr3 54752599 + Exonic hg38 BRCA TCGA-A2-A0CX-01A 5 13 Out-of-frame Intra-chr p14.1 p21.1 Tumor suppressor gene Seq+ 82807 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRR11-IKZF3 PRR11 chr17 59169880 + IKZF3 chr17 39765148 - Exonic hg38 BRCA TCGA-A2-A0CX-01A 3 18 CDS-3'UTR Intra-chr q22 q21.1 Tumor suppressor gene Transcription factor Seq+ 82808 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB7-ITGB3 GRB7 chr17 39744207 + ITGB3 chr17 47274419 + Exonic hg38 BRCA TCGA-A2-A0CX-01A 3 10 Out-of-frame Intra-chr q12 q21.32 Oncogene Tumor suppressor gene Seq+ 82809 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIMKLB-CLEC4D RIMKLB chr12 8714041 + CLEC4D chr12 8515236 + Exonic hg38 BRCA TCGA-A2-A0CX-01A 4 4 In-Frame Intra-chr p13.31 p13.31 Seq+ 82810 ChimerSeq TCGA FAWG TCGA_RNA-Seq OFCC1-SSR1 OFCC1 chr6 9768931 - SSR1 chr6 7310029 - Exonic hg38 BRCA TCGA-A2-A0CX-01A 1 9 Out-of-frame Intra-chr p24.3 p24.3 82811 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTHFD1L-RGS17 MTHFD1L chr6 150887981 + RGS17 chr6 153044043 - Exonic hg38 BRCA TCGA-A2-A0CY-01A 32 50 5'UTR-5'UTR Intra-chr q25.1 q25.2 Seq+ 82812 ChimerSeq TCGA FAWG TCGA_RNA-Seq EZR-RB1CC1 EZR chr6 158785309 - RB1CC1 chr8 52624787 - Exonic hg38 BRCA TCGA-A2-A0CY-01A 24 48 Out-of-frame Inter-chr q25.3 q11.23 Tumor suppressor gene Seq+ 82813 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARCH2-TNNT3 2019_ 3_ 2_ chr19 8438668 + TNNT3 chr11 1928749 + Exonic hg38 BRCA TCGA-A2-A0CY-01A 7 38 Out-of-frame Inter-chr p13.2 p15.5 Seq+ 82814 ChimerSeq TCGA FAWG TCGA_RNA-Seq RLF-SFPQ RLF chr1 40161636 + SFPQ chr1 35191529 - Exonic hg38 BRCA TCGA-A2-A0CY-01A 2 19 In-Frame Intra-chr p34.2 Transcription factor p34.3 Seq+ 82815 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRK-SPARCL1 PTPRK chr6 128184432 - SPARCL1 chr4 87499585 - Exonic hg38 BRCA TCGA-A2-A0CY-01A 2 13 5'UTR-5'UTR Inter-chr Tumor suppressor gene q22.1 Tumor suppressor gene Seq+ 82816 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOP3A-EVI2A TOP3A chr17 18282698 - EVI2A chr17 31319023 - Exonic hg38 BRCA TCGA-A2-A0CY-01A 1 8 5'UTR-5'UTR Intra-chr q11.2 82817 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITPR1-EGOT ITPR1 chr3 4779645 + EGOT chr3 4750010 - Exonic hg38 BRCA TCGA-A2-A0CY-01A 1 7 CDS-3'UTR Intra-chr p26.1 p26.1 82818 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP83-LIN7A CEP83 chr12 94459557 - LIN7A chr12 80811683 - Exonic hg38 BRCA TCGA-A2-A0CZ-01A 4 18 5'UTR-CDS Intra-chr q22 q21.31 82819 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-HEATR6 BCAS3 chr17 61015901 + HEATR6 chr17 60050977 - Exonic hg38 BRCA TCGA-A2-A0CZ-01A 1 8 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 82820 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMAT4-SULF1 ZMAT4 chr8 40808509 - SULF1 chr8 69638735 + Exonic hg38 BRCA TCGA-A2-A0CZ-01A 2 4 CDS-5'UTR Intra-chr p11.21 Transcription factor q13.2 82821 ChimerSeq TCGA FAWG TCGA_RNA-Seq WBP11-MGP WBP11 chr12 14793731 - MGP chr12 14885850 - Exonic hg38 BRCA TCGA-A2-A0D0-01A 22 312 CDS-5'UTR Intra-chr p12.3 p12.3 Seq+ 82822 ChimerSeq TCGA FAWG TCGA_RNA-Seq TYK2-CDC37 TYK2 chr19 10378214 - CDC37 chr19 10393441 - Exonic hg38 BRCA TCGA-A2-A0D0-01A 12 123 Out-of-frame Intra-chr p13.2 TK:JakA p13.2 Seq+ 82823 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM87B-MERTK TMEM87B chr2 112055756 + MERTK chr2 111994251 + Exonic hg38 BRCA TCGA-A2-A0D0-01A 12 19 In-Frame Intra-chr q13 q13 Seq+ 82824 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCARB2-STAU2 SCARB2 chr4 76195707 - STAU2 chr8 73582830 - Exonic hg38 BRCA TCGA-A2-A0D0-01A 6 31 Out-of-frame Inter-chr q21.1 q21.11 Seq+ 82825 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP5-ALG1L8P LRP5 chr11 68348243 + ALG1L8P chr11 67785273 + Exonic hg38 BRCA TCGA-A2-A0D0-01A 7 13 Out-of-frame Intra-chr q13.2 q13.2 82826 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGPS1-TYRP1 RALGPS1 chr9 126965951 + TYRP1 chr9 12693912 + Exonic hg38 BRCA TCGA-A2-A0D0-01A 6 13 CDS-5'UTR Intra-chr q33.3 p23 Seq+ 82827 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD44-CASC11 CD44 chr11 35190065 + CASC11 chr8 127733959 - Exonic hg38 BRCA TCGA-A2-A0D0-01A 7 8 CDS-3'UTR Inter-chr p13 Oncogene Tumor suppressor gene q24.21 82828 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1755-HS6ST2 KIAA1755 chr20 38223538 - HS6ST2 chrX 132629093 - Exonic hg38 BRCA TCGA-A2-A0D0-01A 3 11 Out-of-frame Inter-chr q11.23 q26.2 Seq+ 82829 ChimerSeq TCGA FAWG TCGA_RNA-Seq VAMP7-TGFB2 VAMP7 chrX 155900587 + TGFB2 chr1 218405169 + Exonic hg38 BRCA TCGA-A2-A0D0-01A 4 1 3'UTR-CDS Inter-chr q28 q41 Seq+ 82830 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPHK2-CGB7 SPHK2 chr19 48620553 + CGB7 chr19 49055008 - Exonic hg38 BRCA TCGA-A2-A0D0-01A 2 5 In-Frame Intra-chr q13.33 q13.33 Seq+ 82831 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPAR3-ST6GALNAC3 LPAR3 chr1 84865385 - ST6GALNAC3 chr1 76627452 + Exonic hg38 BRCA TCGA-A2-A0D0-01A 1 7 Out-of-frame Intra-chr p22.3 p31.1 Seq+ 82832 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGPS2-RASAL2 RALGPS2 chr1 178785607 + RASAL2 chr1 178283564 + Exonic hg38 BRCA TCGA-A2-A0D0-01A 2 2 Out-of-frame Intra-chr q25.2 q25.2 Tumor suppressor gene Seq+ 82833 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOOK3-IKBKB HOOK3 chr8 42943445 + IKBKB chr8 42305187 + Exonic hg38 BRCA TCGA-A2-A0D1-01A 5 53 In-Frame Intra-chr p11.21 Oncogene p11.21 Oncogene Seq+ 82834 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX52-ARL17B DDX52 chr17 37633288 - ARL17B chr17 46339774 - Exonic hg38 BRCA TCGA-A2-A0D1-01A 4 31 5'UTR-5'UTR Intra-chr q12 82835 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R1B-PIPOX PPP1R1B chr17 39636004 + PIPOX chr17 29052920 + Exonic hg38 BRCA TCGA-A2-A0D1-01A 3 12 3'UTR-CDS Intra-chr q12 Tumor suppressor gene q11.2 Seq+ 82836 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARA-POLDIP2 RARA chr17 40331396 + POLDIP2 chr17 28354585 - Exonic hg38 BRCA TCGA-A2-A0D1-01A 1 10 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q11.2 82837 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP42-GLCCI1 USP42 chr7 6150506 + GLCCI1 chr7 8003908 + Exonic hg38 BRCA TCGA-A2-A0D1-01A 1 4 Out-of-frame Intra-chr p22.1 p21.3 Seq+ 82838 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK3-FAM60A TAOK3 chr12 118372648 - FAM60A chr12 31298224 - Exonic hg38 BRCA TCGA-A2-A0D1-01A 1 1 Out-of-frame Intra-chr q24.23 82839 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELP2-MAPRE2 ELP2 chr18 36154999 + MAPRE2 chr18 35101946 + Exonic hg38 BRCA TCGA-A2-A0D2-01A 59 198 In-Frame Intra-chr q12.2 q12.1 Seq+ 82840 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK40-MDM4 STK40 chr1 36341099 - MDM4 chr1 204556648 + Exonic hg38 BRCA TCGA-A2-A0D2-01A 12 35 Out-of-frame Intra-chr p34.3 q32.1 Oncogene Seq+ 82841 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS15A-ARL6IP1 RPS15A chr16 18784738 - ARL6IP1 chr16 18798834 - Exonic hg38 BRCA TCGA-A2-A0D2-01A 5 24 Out-of-frame Intra-chr p12.3 p12.3 Seq+ 82842 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPSB3-MEIOB SPSB3 chr16 1781358 - MEIOB chr16 1862116 - Exonic hg38 BRCA TCGA-A2-A0D2-01A 3 30 Out-of-frame Intra-chr p13.3 Seq+ 82843 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMTC4-FGF14 TMTC4 chr13 100625535 - FGF14 chr13 101875296 - Exonic hg38 BRCA TCGA-A2-A0D2-01A 3 5 Out-of-frame Intra-chr q32.3 q33.1 Seq+ 82844 ChimerSeq TCGA FAWG TCGA_RNA-Seq XXYLT1-ACAP2 XXYLT1 chr3 195156449 - ACAP2 chr3 195392147 - Exonic hg38 BRCA TCGA-A2-A0D2-01A 3 2 In-Frame Intra-chr q29 q29 Seq+ 82845 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFB2M-SMYD3 TFB2M chr1 246556573 - SMYD3 chr1 246335474 - Exonic hg38 BRCA TCGA-A2-A0D2-01A 1 5 In-Frame Intra-chr q44 q44 Transcription factor Seq+ 82846 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM2A-FBXO3 KDM2A chr11 67181892 + FBXO3 chr11 33770830 - Exonic hg38 BRCA TCGA-A2-A0D2-01A 1 4 Out-of-frame Intra-chr q13.2 Transcription factor p13 Seq+ 82847 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRRD-MST1 SRRD chr22 26486063 + MST1 chr3 49684656 - Exonic hg38 BRCA TCGA-A2-A0D2-01A 1 3 Out-of-frame Inter-chr q12.1 p21.31 STE:STE20 Tumor suppressor gene 82848 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARA-PCTP RARA chr17 40318448 + PCTP chr17 55771106 + Exonic hg38 BRCA TCGA-A2-A0D4-01A 15 98 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 82849 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM135-AAMDC TMEM135 chr11 87091395 + AAMDC chr11 77842479 + Exonic hg38 BRCA TCGA-A2-A0D4-01A 4 29 In-Frame Intra-chr q14.2 q14.1 Seq+ 82850 ChimerSeq TCGA FAWG TCGA_RNA-Seq NADSYN1-TRIM9 NADSYN1 chr11 71478469 + TRIM9 chr14 51025360 - Exonic hg38 BRCA TCGA-A2-A0D4-01A 5 8 In-Frame Inter-chr q13.4 q22.1 Seq+ 82851 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB3-CPB1 ERBB3 chr12 56102834 + CPB1 chr3 148841830 + Exonic hg38 BRCA TCGA-A2-A0D4-01A 1000 1000 Out-of-frame Inter-chr q13.2 Oncogene q24 82852 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC117-CPB1 CCDC117 chr22 28788981 + CPB1 chr3 148854465 + Exonic hg38 BRCA TCGA-A2-A0D4-01A 1000 1000 Out-of-frame Inter-chr q12.1 q24 82853 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF9-CISD2 ARHGEF9 chrX 63754315 - CISD2 chr4 102885216 + Exonic hg38 BRCA TCGA-A2-A0EM-01A 3 4 5'UTR-CDS Inter-chr q11.2 q24 Seq+ 82854 ChimerSeq TCGA FAWG TCGA_RNA-Seq HARS-CLINT1 HARS chr5 140690855 - CLINT1 chr5 157794972 - Exonic hg38 BRCA TCGA-A2-A0EP-01A 2 4 Out-of-frame Intra-chr q31.3 q33.3 Seq+ 82855 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD50-TCOF1 RAD50 chr5 132559367 + TCOF1 chr5 150387902 + Exonic hg38 BRCA TCGA-A2-A0EP-01A 1 5 In-Frame Intra-chr q31.1 Oncogene q32 Seq+ 82856 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTTN-PSME2 CTTN chr11 70398614 + PSME2 chr14 24143671 - Exonic hg38 BRCA TCGA-A2-A0EQ-01A 161 88 5'UTR-5'UTR Inter-chr q13.3 q12 Seq+ 82857 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACER3-NRL ACER3 chr11 76861079 + NRL chr14 24084745 - Exonic hg38 BRCA TCGA-A2-A0EQ-01A 13 62 5'UTR-5'UTR Inter-chr q13.5 q12 Transcription factor Seq+ 82858 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRHL2-PAGE3 GRHL2 chr8 101558812 + PAGE3 chrX 55263359 - Exonic hg38 BRCA TCGA-A2-A0EQ-01A 2 9 In-Frame Inter-chr q22.3 Transcription factor p11.21 Seq+ 82859 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS4X-CPB1 RPS4X chrX 72275053 - CPB1 chr3 148844677 + Exonic hg38 BRCA TCGA-A2-A0ER-01A 1 11 3'UTR-CDS Inter-chr q13.1 q24 82860 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF13B-TENM4 KIF13B chr8 29122591 - TENM4 chr11 78676387 - Exonic hg38 BRCA TCGA-A2-A0ES-01A 12 42 In-Frame Inter-chr p12 q14.1 Seq+ 82861 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-ZMAT4 UVRAG chr11 76016980 + ZMAT4 chr8 40532238 - Exonic hg38 BRCA TCGA-A2-A0ES-01A 17 18 In-Frame Inter-chr q13.5 Tumor suppressor gene p11.21 Transcription factor Seq+ 82862 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPP5-RAD51B MPP5 chr14 67312710 + RAD51B chr14 68729808 + Exonic hg38 BRCA TCGA-A2-A0ES-01A 4 11 CDS-3'UTR Intra-chr q23.3 q24.1 Seq+ 82863 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAP1B-GLIPR1L1 RAP1B chr12 68624873 + GLIPR1L1 chr12 75343693 + Exonic hg38 BRCA TCGA-A2-A0ES-01A 2 2 5'UTR-CDS Intra-chr q15 q21.2 Seq+ 82864 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMPR1B-MCC BMPR1B chr4 94996134 + MCC chr5 113071234 - Exonic hg38 BRCA TCGA-A2-A0ET-01A 7 21 3'UTR-CDS Inter-chr q22.3 TKL:STKR q22.2 Tumor suppressor gene Seq+ 82865 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRCA2-RXFP2 BRCA2 chr13 32371100 + RXFP2 chr13 31758258 + Exonic hg38 BRCA TCGA-A2-A0ET-01A 1 3 In-Frame Intra-chr q13.1 Oncogene Tumor suppressor gene q13.1 82866 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP13A3-LRRC15 ATP13A3 chr3 194425342 - LRRC15 chr3 194363412 - Exonic hg38 BRCA TCGA-A2-A0ET-01A 1000 1000 CDS-5'UTR Intra-chr q29 q29 Seq+ 82867 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF460-ELSPBP1 ZNF460 chr19 57284677 + ELSPBP1 chr19 48014171 + Exonic hg38 BRCA TCGA-A2-A0EV-01A 32 237 In-Frame Intra-chr q13.43 Transcription factor q13.33 Seq+ 82868 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF83-PCDH15 ZNF83 chr19 52635066 - PCDH15 chr10 54664290 - Exonic hg38 BRCA TCGA-A2-A0EV-01A 17 44 5'UTR-5'UTR Inter-chr q13.41 Transcription factor q21.1 Seq+ 82869 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAF1-MAP4K1 SCAF1 chr19 49657889 + MAP4K1 chr19 38587817 - Exonic hg38 BRCA TCGA-A2-A0EV-01A 9 47 CDS-5'UTR Intra-chr q13.33 Tumor suppressor gene Seq+ 82870 ChimerSeq TCGA FAWG TCGA_RNA-Seq TJP2-TMEM38B TJP2 chr9 69230232 + TMEM38B chr9 105773865 + Exonic hg38 BRCA TCGA-A2-A0EW-01A 4 28 In-Frame Intra-chr q21.11 q31.2 Seq+ 82871 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASTN2-LRRC37A5P ASTN2 chr9 117039819 - LRRC37A5P chr9 111603113 - Exonic hg38 BRCA TCGA-A2-A0EW-01A 6 15 CDS-3'UTR Intra-chr q33.1 q31.3 Seq+ 82872 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSDL2-FRMD3 HSDL2 chr9 112380180 + FRMD3 chr9 83389708 - Exonic hg38 BRCA TCGA-A2-A0EW-01A 6 8 Out-of-frame Intra-chr q32 q21.32 Seq+ 82873 ChimerSeq TCGA FAWG TCGA_RNA-Seq BBOF1-RGS6 BBOF1 chr14 74019534 + RGS6 chr14 72454528 + Exonic hg38 BRCA TCGA-A2-A0EW-01A 3 13 Out-of-frame Intra-chr q24.3 q24.2 82874 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMTOR1-NSD3 LAMTOR1 chr11 72098289 - NSD3 chr8 38305445 - Exonic hg38 BRCA TCGA-A2-A0EW-01A 1 10 Out-of-frame Inter-chr q13.4 p11.23 Tumor suppressor gene 82875 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNTA-ZMAT4 FNTA chr8 43077364 + ZMAT4 chr8 40825680 - Exonic hg38 BRCA TCGA-A2-A0EW-01A 1 6 5'UTR-5'UTR Intra-chr p11.21 p11.21 Transcription factor Seq+ 82876 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOOK3-TM2D2 HOOK3 chr8 42897188 + TM2D2 chr8 38993660 - Exonic hg38 BRCA TCGA-A2-A0EW-01A 1 5 In-Frame Intra-chr p11.21 Oncogene p11.22 Seq+ 82877 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPS1-PVT1 TRPS1 chr8 115668545 - PVT1 chr8 128096518 + Exonic hg38 BRCA TCGA-A2-A0EX-01A 1 7 5'UTR-5'UTR Intra-chr q23.3 Transcription factor q24.21 82878 ChimerSeq TCGA FAWG TCGA_RNA-Seq C19orf25-MED1 C19orf25 chr19 1478774 - MED1 chr17 39447904 - Exonic hg38 BRCA TCGA-A2-A0EY-01A 32 41 In-Frame Inter-chr p13.3 q12 Tumor suppressor gene Seq+ 82879 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED1-TMPRSS9 MED1 chr17 39451038 - TMPRSS9 chr19 2398795 + Exonic hg38 BRCA TCGA-A2-A0EY-01A 9 63 Out-of-frame Inter-chr q12 Tumor suppressor gene p13.3 Seq+ 82880 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESRP2-SLC7A6 ESRP2 chr16 68231178 - SLC7A6 chr16 68287746 + Exonic hg38 BRCA TCGA-A2-A0EY-01A 7 38 In-Frame Intra-chr q22.1 q22.1 Seq+ 82881 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR137C-FERMT2 GPR137C chr14 52553591 + FERMT2 chr14 52864853 - Exonic hg38 BRCA TCGA-A2-A0EY-01A 9 25 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 82882 ChimerSeq TCGA FAWG TCGA_RNA-Seq L2HGDH-LMBRD1 L2HGDH chr14 50294115 - LMBRD1 chr6 69676541 - Exonic hg38 BRCA TCGA-A2-A0EY-01A 4 35 Out-of-frame Inter-chr q21.3 q13 Seq+ 82883 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPECC1-TMEM11 SPECC1 chr17 20156236 + TMEM11 chr17 21198840 - Exonic hg38 BRCA TCGA-A2-A0EY-01A 10 10 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 82884 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPS1-TBC1D9B TRPS1 chr8 115587001 - TBC1D9B chr5 179894614 - Exonic hg38 BRCA TCGA-A2-A0EY-01A 5 20 CDS-5'UTR Inter-chr q23.3 Transcription factor Seq+ 82885 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMG1-ANO3 SMG1 chr16 18858170 - ANO3 chr11 26647709 + Exonic hg38 BRCA TCGA-A2-A0EY-01A 2 27 In-Frame Inter-chr p12.3 Atypical:PIKK p14.2 Seq+ 82886 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-SIRT6 FBXL20 chr17 39401361 - SIRT6 chr19 4175937 - Exonic hg38 BRCA TCGA-A2-A0EY-01A 3 4 Out-of-frame Inter-chr q12 p13.3 Tumor suppressor gene Seq+ 82887 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK1IP1L-ARF6 MAPK1IP1L chr14 55051803 + ARF6 chr14 49893256 + Exonic hg38 BRCA TCGA-A2-A0EY-01A 3 4 5'UTR-5'UTR Intra-chr q22.3 q21.3 Seq+ 82888 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-CEP112 FBXL20 chr17 39402173 - CEP112 chr17 66030023 - Exonic hg38 BRCA TCGA-A2-A0EY-01A 2 5 In-Frame Intra-chr q12 q24.1 Seq+ 82889 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF333-CYP4F22 ZNF333 chr19 14695661 + CYP4F22 chr19 15529709 + Exonic hg38 BRCA TCGA-A2-A0ST-01A 7 14 Out-of-frame Intra-chr p13.12 Transcription factor p13.12 Seq+ 82890 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP1A1-NOTCH2 ATP1A1 chr1 116384124 + NOTCH2 chr1 119922778 - Exonic hg38 BRCA TCGA-A2-A0ST-01A 2 25 Out-of-frame Intra-chr p13.1 p12 Oncogene Tumor suppressor gene Seq+ 82891 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMTM8-NR1D2 CMTM8 chr3 32239119 + NR1D2 chr3 23954537 + Exonic hg38 BRCA TCGA-A2-A0ST-01A 1 9 Out-of-frame Intra-chr p22.3 p24.2 Transcription factor Seq+ 82892 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLN2-FGF7 TLN2 chr15 62390685 + FGF7 chr15 49483151 + Exonic hg38 BRCA TCGA-A2-A0SU-01A 13 41 5'UTR-CDS Intra-chr q22.2 q21.2 82893 ChimerSeq TCGA FAWG TCGA_RNA-Seq IQGAP1-AGBL1 IQGAP1 chr15 90390873 + AGBL1 chr15 86142004 + Exonic hg38 BRCA TCGA-A2-A0SU-01A 1 22 Out-of-frame Intra-chr q26.1 q25.3 82894 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF18-TASP1 ZNF18 chr17 11984113 - TASP1 chr20 13417521 - Exonic hg38 BRCA TCGA-A2-A0SU-01A 2 9 In-Frame Inter-chr p12 Transcription factor p12.1 Seq+ 82895 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF2-GRAP2 NF2 chr22 29639212 + GRAP2 chr22 39955819 + Exonic hg38 BRCA TCGA-A2-A0SV-01A 23 74 In-Frame Intra-chr q12.2 Oncogene Tumor suppressor gene q13.1 Seq+ 82896 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSTM1-SNX3 OSTM1 chr6 108074250 - SNX3 chr6 108223045 - Exonic hg38 BRCA TCGA-A2-A0SV-01A 6 28 In-Frame Intra-chr q21 q21 Seq+ 82897 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAST-FAM172A CAST chr5 96695907 + FAM172A chr5 93964523 - Exonic hg38 BRCA TCGA-A2-A0SV-01A 7 21 In-Frame Intra-chr q15 q15 Tumor suppressor gene Seq+ 82898 ChimerSeq TCGA FAWG TCGA_RNA-Seq IPPK-ASPN IPPK chr9 92634386 - ASPN chr9 92474927 - Exonic hg38 BRCA TCGA-A2-A0SW-01A 3 5 CDS-5'UTR Intra-chr q22.31 q22.31 Seq+ 82899 ChimerSeq TCGA FAWG TCGA_RNA-Seq LURAP1L-TYRP1 LURAP1L chr9 12776027 + TYRP1 chr9 12693912 + Exonic hg38 BRCA TCGA-A2-A0SX-01A 3 6 CDS-5'UTR Intra-chr p23 p23 Seq+ 82900 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAML3-CLGN MAML3 chr4 140152860 - CLGN chr4 140399040 - Exonic hg38 BRCA TCGA-A2-A0SX-01A 1 13 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 82901 ChimerSeq TCGA FAWG TCGA_RNA-Seq KPNA4-TRIM59 KPNA4 chr3 160521779 - TRIM59 chr3 160439186 - Exonic hg38 BRCA TCGA-A2-A0SX-01A 1000 1000 CDS-5'UTR Intra-chr q25.33 q25.33 82902 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR70-ADAMTS12 WDR70 chr5 37605238 + ADAMTS12 chr5 33751548 - Exonic hg38 BRCA TCGA-A2-A0SY-01A 6 22 In-Frame Intra-chr p13.2 p13.2 Seq+ 82903 ChimerSeq TCGA FAWG TCGA_RNA-Seq CA10-TTC25 CA10 chr17 51930990 - TTC25 chr17 41945136 + Exonic hg38 BRCA TCGA-A2-A0SY-01A 5 4 Out-of-frame Intra-chr q22 q21.2 Seq+ 82904 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPECC1L-BCRP1 SPECC1L chr22 24276803 + BCRP1 chr22 24260901 - Exonic hg38 BRCA TCGA-A2-A0T0-01A 10 33 Out-of-frame Intra-chr q11.23 q11.23 Tumor suppressor gene 82905 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBAP2-FAM171A1 UBAP2 chr9 34048825 - FAM171A1 chr10 15284105 - Exonic hg38 BRCA TCGA-A2-A0T0-01A 8 3 5'UTR-CDS Inter-chr p13.3 p13 82906 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANK3-CCDC6 ANK3 chr10 60134271 - CCDC6 chr10 59852702 - Exonic hg38 BRCA TCGA-A2-A0T0-01A 1 3 In-Frame Intra-chr q21.2 q21.2 Seq+ 82907 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRCIN1-PCYT2 SRCIN1 chr17 38574876 - PCYT2 chr17 81909602 - Exonic hg38 BRCA TCGA-A2-A0T1-01A 27 90 5'UTR-5'UTR Intra-chr q12 q25.3 Seq+ 82908 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACOT7-NSMCE2 ACOT7 chr1 6393257 - NSMCE2 chr8 125366768 + Exonic hg38 BRCA TCGA-A2-A0T1-01A 15 78 In-Frame Inter-chr p36.31 q24.13 Seq+ 82909 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMD12-FDCSP SAMD12 chr8 118580715 - FDCSP chr4 70231195 + Exonic hg38 BRCA TCGA-A2-A0T1-01A 6 58 CDS-5'UTR Inter-chr q24.12 q13.3 Seq+ 82910 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND1A-LRRC69 DENND1A chr9 123757703 - LRRC69 chr8 91218890 + Exonic hg38 BRCA TCGA-A2-A0T1-01A 7 41 Out-of-frame Inter-chr q33.3 q21.3 Seq+ 82911 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN10-PCYT2 TSPAN10 chr17 81637268 + PCYT2 chr17 81902894 - Exonic hg38 BRCA TCGA-A2-A0T1-01A 11 0 Out-of-frame Intra-chr q25.3 q25.3 82912 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCA6-LIG3 ABCA6 chr17 69106123 - LIG3 chr17 34996064 + Exonic hg38 BRCA TCGA-A2-A0T1-01A 4 26 Out-of-frame Intra-chr q24.3 q12 Tumor suppressor gene Seq+ 82913 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND1A-SLC26A7 DENND1A chr9 123757703 - SLC26A7 chr8 91218890 + Exonic hg38 BRCA TCGA-A2-A0T1-01A 7 12 CDS-5'UTR Inter-chr q33.3 q21.3 Seq+ 82914 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR2D-TFCP2L1 POLR2D chr2 127847063 - TFCP2L1 chr2 121219485 - Exonic hg38 BRCA TCGA-A2-A0T1-01A 5 16 Out-of-frame Intra-chr q14.3 q14.2 Transcription factor Seq+ 82915 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAB2IP-HTN3 DAB2IP chr9 121678781 + HTN3 chr4 70028443 + Exonic hg38 BRCA TCGA-A2-A0T1-01A 4 14 CDS-3'UTR Inter-chr q33.2 Tumor suppressor gene Seq+ 82916 ChimerSeq TCGA FAWG TCGA_RNA-Seq COX18-TBCD COX18 chr4 73061813 - TBCD chr17 82903405 + Exonic hg38 BRCA TCGA-A2-A0T1-01A 4 10 CDS-5'UTR Inter-chr q13.3 Seq+ 82917 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR70-PGAP3 WDR70 chr5 37479987 + PGAP3 chr17 39674679 - Exonic hg38 BRCA TCGA-A2-A0T1-01A 2 18 In-Frame Inter-chr p13.2 q12 Oncogene Seq+ 82918 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC2-GOSR1 TANC2 chr17 63238077 + GOSR1 chr17 30519939 + Exonic hg38 BRCA TCGA-A2-A0T1-01A 3 9 Out-of-frame Intra-chr q23.2 q11.2 Seq+ 82919 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPBL-ANKRD17 NIPBL chr5 37010225 + ANKRD17 chr4 73177533 - Exonic hg38 BRCA TCGA-A2-A0T1-01A 2 12 In-Frame Inter-chr p13.2 q13.3 Seq+ 82920 ChimerSeq TCGA FAWG TCGA_RNA-Seq METRNL-PPP1R1B METRNL chr17 83085323 + PPP1R1B chr17 39629170 + Exonic hg38 BRCA TCGA-A2-A0T1-01A 2 10 5'UTR-5'UTR Intra-chr q12 Tumor suppressor gene Seq+ 82921 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENDOV-IKZF3 ENDOV chr17 80429831 + IKZF3 chr17 39766493 - Exonic hg38 BRCA TCGA-A2-A0T1-01A 1 5 In-Frame Intra-chr q25.3 q21.1 Tumor suppressor gene Transcription factor Seq+ 82922 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRK3-SF3A1 GRK3 chr22 25644665 + SF3A1 chr22 30353072 - Exonic hg38 BRCA TCGA-A2-A0T3-01A 4 32 In-Frame Intra-chr q12.1 q12.2 82923 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPGRIP1L-KLHL22 RPGRIP1L chr16 53686433 - KLHL22 chr22 20489212 - Exonic hg38 BRCA TCGA-A2-A0T3-01A 1 6 CDS-5'UTR Inter-chr q12.2 q11.21 Seq+ 82924 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB28-MGME1 RAB28 chr4 13460699 - MGME1 chr20 17969801 + Exonic hg38 BRCA TCGA-A2-A0T3-01A 1 5 CDS-5'UTR Inter-chr p15.33 p11.23 82925 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIO-LRFN5 TRIO chr5 14482773 + LRFN5 chr14 41898917 + Exonic hg38 BRCA TCGA-A2-A0T3-01A 1 3 Out-of-frame Inter-chr p15.2 q21.1 82926 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALG8-NARS2 ALG8 chr11 78103980 - NARS2 chr11 78493195 - Exonic hg38 BRCA TCGA-A2-A0T4-01A 26 119 In-Frame Intra-chr q14.1 q14.1 Seq+ 82927 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC1-MLIP LRRC1 chr6 53795415 + MLIP chr6 54121447 + Exonic hg38 BRCA TCGA-A2-A0T4-01A 3 33 In-Frame Intra-chr p12.1 p12.1 Seq+ 82928 ChimerSeq TCGA FAWG TCGA_RNA-Seq THAP12-FCHSD2 THAP12 chr11 76360956 - FCHSD2 chr11 73083740 - Exonic hg38 BRCA TCGA-A2-A0T4-01A 4 9 Out-of-frame Intra-chr q13.5 Transcription factor q13.4 82929 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSTA4-NADSYN1 GSTA4 chr6 52982574 - NADSYN1 chr11 71497483 + Exonic hg38 BRCA TCGA-A2-A0T4-01A 3 6 In-Frame Inter-chr p12.2 q13.4 Seq+ 82930 ChimerSeq TCGA FAWG TCGA_RNA-Seq COX6C-ZFPM2 COX6C chr8 99887490 - ZFPM2 chr8 104895407 + Exonic hg38 BRCA TCGA-A2-A0T4-01A 2 7 3'UTR-5'UTR Intra-chr q22.2 q22.3 Transcription factor 82931 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAF8-GINM1 SCAF8 chr6 154733930 + GINM1 chr6 149572285 + Exonic hg38 BRCA TCGA-A2-A0T4-01A 2 3 In-Frame Intra-chr q25.2 q25.1 Seq+ 82932 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM2A-FAM83B KDM2A chr11 67181892 + FAM83B chr6 54870187 + Exonic hg38 BRCA TCGA-A2-A0T4-01A 1 3 5'UTR-5'UTR Inter-chr q13.2 Transcription factor p12.1 82933 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP12-KCNB2 LRP12 chr8 104588819 - KCNB2 chr8 72567642 + Exonic hg38 BRCA TCGA-A2-A0T4-01A 1 1 CDS-5'UTR Intra-chr q22.3 q21.11 Seq+ 82934 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTPS2-RBBP7 CTPS2 chrX 16698238 - RBBP7 chrX 16853844 - Exonic hg38 BRCA TCGA-A2-A0T7-01A 58 270 Out-of-frame Intra-chr p22.2 p22.2 Tumor suppressor gene Seq+ 82935 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAAH2-SSPN FAAH2 chrX 57292580 + SSPN chr12 26287483 + Exonic hg38 BRCA TCGA-A2-A0T7-01A 5 14 CDS-3'UTR Inter-chr p11.21 p12.1 82936 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCY9-SRL ADCY9 chr16 4113750 - SRL chr16 4195786 - Exonic hg38 BRCA TCGA-A2-A0T7-01A 4 11 In-Frame Intra-chr p13.3 p13.3 Seq+ 82937 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUX1-MARCH10 CUX1 chr7 101816093 + 2019_ 3_ 10_ chr17 62760006 - Exonic hg38 BRCA TCGA-A2-A0T7-01A 1 22 Out-of-frame Inter-chr q22.1 Tumor suppressor gene Transcription factor q23.2 Seq+ 82938 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBL3-CRISPLD2 UBL3 chr13 29772112 - CRISPLD2 chr16 84866897 + Exonic hg38 BRCA TCGA-A2-A0T7-01A 4 10 In-Frame Inter-chr q12.3 q24.1 Seq+ 82939 ChimerSeq TCGA FAWG TCGA_RNA-Seq UAP1-LMX1A UAP1 chr1 162590511 + LMX1A chr1 165249640 - Exonic hg38 BRCA TCGA-A2-A0T7-01A 2 2 In-Frame Intra-chr q23.3 q23.3 Transcription factor Seq+ 82940 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDGFA-NT5C3A PDGFA chr7 510809 - NT5C3A chr7 33024108 - Exonic hg38 BRCA TCGA-A2-A0YE-01A 46 246 In-Frame Intra-chr p22.3 p14.3 Seq+ 82941 ChimerSeq TCGA FAWG TCGA_RNA-Seq HS2ST1-PRDX1 HS2ST1 chr1 86915160 + PRDX1 chr1 45519054 - Exonic hg38 BRCA TCGA-A2-A0YE-01A 18 75 CDS-5'UTR Intra-chr p22.3 p34.1 Seq+ 82942 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDF2-RPTOR SDF2 chr17 28661726 - RPTOR chr17 80625691 + Exonic hg38 BRCA TCGA-A2-A0YE-01A 7 35 Out-of-frame Intra-chr q11.2 q25.3 Seq+ 82943 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL26-KXD1 KLHL26 chr19 18664443 + KXD1 chr19 18568402 + Exonic hg38 BRCA TCGA-A2-A0YE-01A 4 13 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 82944 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREB5-USP42 CREB5 chr7 28507737 + USP42 chr7 6156754 + Exonic hg38 BRCA TCGA-A2-A0YE-01A 2 13 Out-of-frame Intra-chr p15.1 Transcription factor p22.1 Seq+ 82945 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCA-ST6GALNAC2 PRKCA chr17 66496283 + ST6GALNAC2 chr17 76578816 - Exonic hg38 BRCA TCGA-A2-A0YE-01A 2 12 Out-of-frame Intra-chr q24.2 q25.1 Seq+ 82946 ChimerSeq TCGA FAWG TCGA_RNA-Seq NBPF26-MACF1 NBPF26 chr1 120763709 + MACF1 chr1 39309570 + Exonic hg38 BRCA TCGA-A2-A0YE-01A 3 7 5'UTR-CDS Intra-chr p11.2 p34.3 82947 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTOR-CDC42 MTOR chr1 11199258 - CDC42 chr1 22078429 + Exonic hg38 BRCA TCGA-A2-A0YE-01A 2 4 CDS-5'UTR Intra-chr p36.22 Oncogene p36.12 Seq+ 82948 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-MYEOV UVRAG chr11 75861780 + MYEOV chr11 69366743 + Exonic hg38 BRCA TCGA-A2-A0YF-01A 26 64 CDS-3'UTR Intra-chr q13.5 Tumor suppressor gene q13.3 Seq+ 82949 ChimerSeq TCGA FAWG TCGA_RNA-Seq STX5-BSCL2 STX5 chr11 62825036 - BSCL2 chr11 62694711 - Exonic hg38 BRCA TCGA-A2-A0YF-01A 7 38 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 82950 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARRB1-MYEOV ARRB1 chr11 75281075 - MYEOV chr11 69367039 + Exonic hg38 BRCA TCGA-A2-A0YF-01A 5 18 CDS-3'UTR Intra-chr q13.4 q13.3 Seq+ 82951 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO1-EMSY ANO1 chr11 70078714 + EMSY chr11 76549952 + Exonic hg38 BRCA TCGA-A2-A0YF-01A 3 5 In-Frame Intra-chr q13.3 q13.5 82952 ChimerSeq TCGA FAWG TCGA_RNA-Seq THSD4-THAP10 THSD4 chr15 71154932 + THAP10 chr15 70882908 - Exonic hg38 BRCA TCGA-A2-A0YF-01A 1 1 In-Frame Intra-chr q23 q23 Transcription factor 82953 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARA-PRR11 RARA chr17 40318448 + PRR11 chr17 59169748 + Exonic hg38 BRCA TCGA-A2-A0YG-01A 1016 3491 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 82954 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF7-RGS9 DCAF7 chr17 63550815 + RGS9 chr17 65119152 + Exonic hg38 BRCA TCGA-A2-A0YG-01A 120 637 5'UTR-5'UTR Intra-chr q23.3 q24.1 82955 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF6-MPZL1 DCAF6 chr1 167937008 + MPZL1 chr1 167765583 + Exonic hg38 BRCA TCGA-A2-A0YG-01A 32 83 In-Frame Intra-chr q24.2 q24.2 KB Seq+ 82956 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOS1AP-MROH9 NOS1AP chr1 162333125 + MROH9 chr1 171014117 + Exonic hg38 BRCA TCGA-A2-A0YG-01A 10 60 In-Frame Intra-chr q23.3 q24.3 Seq+ 82957 ChimerSeq TCGA FAWG TCGA_RNA-Seq UCK2-SNX27 UCK2 chr1 165827932 + SNX27 chr1 151638888 + Exonic hg38 BRCA TCGA-A2-A0YG-01A 10 21 Out-of-frame Intra-chr q24.1 q21.3 Seq+ 82958 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTN4-DTNB RTN4 chr2 54982515 - DTNB chr2 25388361 - Exonic hg38 BRCA TCGA-A2-A0YG-01A 6 21 In-Frame Intra-chr p16.1 Tumor suppressor gene p23.3 Seq+ 82959 ChimerSeq TCGA FAWG TCGA_RNA-Seq APH1A-RGS4 APH1A chr1 150268698 - RGS4 chr1 163069252 + Exonic hg38 BRCA TCGA-A2-A0YG-01A 6 12 Out-of-frame Intra-chr q21.2 q23.3 Seq+ 82960 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF91-RNF38 ZNF91 chr19 23373738 - RNF38 chr9 36424679 - Exonic hg38 BRCA TCGA-A2-A0YG-01A 4 14 Out-of-frame Inter-chr p12 Transcription factor p13.2 82961 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP3R1-TTC27 PPP3R1 chr2 68252125 - TTC27 chr2 32782626 + Exonic hg38 BRCA TCGA-A2-A0YG-01A 2 10 In-Frame Intra-chr p14 p22.3 Seq+ 82962 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCD4-4 PLCD4 chr2 218628141 + 4 chr22 22858185 + Exonic hg38 BRCA TCGA-A2-A0YH-01A 10 0 Out-of-frame Inter-chr q35 82963 ChimerSeq TCGA FAWG TCGA_RNA-Seq P4HA1-C10orf11 P4HA1 chr10 73096766 - C10orf11 chr10 76557209 + Exonic hg38 BRCA TCGA-A2-A0YH-01A 2 4 Out-of-frame Intra-chr q22.1 Seq+ 82964 ChimerSeq TCGA FAWG TCGA_RNA-Seq PACS1-RHOD PACS1 chr11 66193573 + RHOD chr11 67065896 + Exonic hg38 BRCA TCGA-A2-A0YI-01A 4 10 In-Frame Intra-chr q13.1 q13.2 Seq+ 82965 ChimerSeq TCGA FAWG TCGA_RNA-Seq ILF3-C3 ILF3 chr19 10654487 + C3 chr19 6697794 - Exonic hg38 BRCA TCGA-A2-A0YJ-01A 15 37 5'UTR-CDS Intra-chr p13.2 p13.3 Seq+ 82966 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFEB-LASP1 TFEB chr6 41735350 - LASP1 chr17 38878086 + Exonic hg38 BRCA TCGA-A2-A0YJ-01A 3 10 5'UTR-5'UTR Inter-chr p21.1 Transcription factor q12 Seq+ 82967 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASC3-MED24 CASC3 chr17 40141607 + MED24 chr17 40053635 - Exonic hg38 BRCA TCGA-A2-A0YJ-01A 1 12 CDS-5'UTR Intra-chr q21.1 q21.1 82968 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K2-SUPT3H MAP3K2 chr2 127387452 - SUPT3H chr6 44829857 - Exonic hg38 BRCA TCGA-A2-A0YJ-01A 1 12 5'UTR-CDS Inter-chr q14.3 STE:STE11 p21.1 82969 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD9-ATAD1 BTBD9 chr6 38577600 - ATAD1 chr10 87814612 - Exonic hg38 BRCA TCGA-A2-A0YJ-01A 1 10 CDS-5'UTR Inter-chr p21.2 Seq+ 82970 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED20-PGC MED20 chr6 41916785 - PGC chr6 41744808 - Exonic hg38 BRCA TCGA-A2-A0YJ-01A 1 6 Out-of-frame Intra-chr p21.1 p21.1 82971 ChimerSeq TCGA FAWG TCGA_RNA-Seq TESMIN-KMT5B TESMIN chr11 68747208 - KMT5B chr11 68190152 - Exonic hg38 BRCA TCGA-A2-A0YK-01A 5 28 CDS-5'UTR Intra-chr q13.3 q13.2 82972 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0368-ZNF484 KIAA0368 chr9 111423199 - ZNF484 chr9 92875059 - Exonic hg38 BRCA TCGA-A2-A0YK-01A 1 1 Out-of-frame Intra-chr q31.3 q22.31 Transcription factor 82973 ChimerSeq TCGA FAWG TCGA_RNA-Seq SS18-SUPT3H SS18 chr18 26087501 - SUPT3H chr6 44809501 - Exonic hg38 BRCA TCGA-A2-A0YM-01A 106 276 CDS-3'UTR Inter-chr q11.2 p21.1 82974 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBX1-ILDR2 PBX1 chr1 164563311 + ILDR2 chr1 166958101 - Exonic hg38 BRCA TCGA-A2-A0YM-01A 7 25 In-Frame Intra-chr q23.3 Oncogene Transcription factor q24.1 Seq+ 82975 ChimerSeq TCGA FAWG TCGA_RNA-Seq RGL3-ECSIT RGL3 chr19 11399855 - ECSIT chr19 11506428 - Exonic hg38 BRCA TCGA-A2-A0YM-01A 5 24 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 82976 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEGF8-PRR19 MEGF8 chr19 42337206 + PRR19 chr19 42309579 + Exonic hg38 BRCA TCGA-A2-A0YM-01A 5 21 CDS-5'UTR Intra-chr q13.2 q13.2 Seq+ 82977 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHODL-MIR548XHG CHODL chr21 17917400 + MIR548XHG chr21 18612293 - Exonic hg38 BRCA TCGA-A2-A0YM-01A 1 16 5'UTR-3'UTR Intra-chr q21.1 q21.1 82978 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHLPP1-CBLN2 PHLPP1 chr18 62972708 + CBLN2 chr18 72620590 - Exonic hg38 BRCA TCGA-A2-A0YM-01A 2 11 CDS-5'UTR Intra-chr q21.33 Tumor suppressor gene q22.3 82979 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF6-SLC19A2 DCAF6 chr1 167937008 + SLC19A2 chr1 169470186 - Exonic hg38 BRCA TCGA-A2-A0YM-01A 4 1 Out-of-frame Intra-chr q24.2 q24.2 82980 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5370375 - RNF216 chr7 5652510 - Exonic hg38 BRCA TCGA-A2-A0YT-01A 16 47 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 82981 ChimerSeq TCGA FAWG TCGA_RNA-Seq LARGE1-SNW1 LARGE1 chr22 33564848 - SNW1 chr14 77723277 - Exonic hg38 BRCA TCGA-A2-A0YT-01A 6 53 In-Frame Inter-chr q12.3 q24.3 82982 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPC2-RAD51B NPC2 chr14 74493193 - RAD51B chr14 68411424 + Exonic hg38 BRCA TCGA-A2-A0YT-01A 7 38 In-Frame Intra-chr q24.3 q24.1 Seq+ 82983 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD51B-TMPRSS4 RAD51B chr14 68411527 + TMPRSS4 chr11 118111741 + Exonic hg38 BRCA TCGA-A2-A0YT-01A 7 12 Out-of-frame Inter-chr q24.1 q23.3 Seq+ 82984 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRYBG3-ARL6 CRYBG3 chr3 97864647 + ARL6 chr3 97784955 + Exonic hg38 BRCA TCGA-A2-A0YT-01A 1 11 In-Frame Intra-chr q11.2 q11.2 82985 ChimerSeq TCGA FAWG TCGA_RNA-Seq JUP-RFX5 JUP chr17 41767529 - RFX5 chr1 151342780 - Exonic hg38 BRCA TCGA-A2-A0YT-01A 3 1 Out-of-frame Inter-chr q21.2 Tumor suppressor gene q21.3 Transcription factor Seq+ 82986 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB4-SLC25A10 ERBB4 chr2 212538449 - SLC25A10 chr17 81714953 + Exonic hg38 BRCA TCGA-A2-A0YT-01A 1 1 Out-of-frame Inter-chr q34 Oncogene Tumor suppressor gene q25.3 82987 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDCD6IP-SRSF1 PDCD6IP chr3 33826580 + SRSF1 chr17 58005041 - Exonic hg38 BRCA TCGA-A2-A0YT-01A 1 1 CDS-3'UTR Inter-chr p22.3 q22 82988 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIST1H2BH-HIST1H2AC HIST1H2BH chr6 26252143 + HIST1H2AC chr6 26124200 + Exonic hg38 BRCA TCGA-A2-A0YT-01A 1000 1000 Out-of-frame Intra-chr p22.2 p22.2 82989 ChimerSeq TCGA FAWG TCGA_RNA-Seq TET2-LANCL1 TET2 chr4 105243778 + LANCL1 chr2 210476412 - Exonic hg38 BRCA TCGA-A2-A1FV-01A 7 34 CDS-5'UTR Inter-chr q24 Oncogene Tumor suppressor gene Transcription factor q34 Seq+ 82990 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNTB-PEBP4 FNTB chr14 64987097 + PEBP4 chr8 22727220 - Exonic hg38 BRCA TCGA-A2-A1FV-01A 6 17 In-Frame Inter-chr q23.3 p21.3 Seq+ 82991 ChimerSeq TCGA FAWG TCGA_RNA-Seq WBP4-FANK1 WBP4 chr13 41061675 + FANK1 chr10 125980161 + Exonic hg38 BRCA TCGA-A2-A1FV-01A 2 14 Out-of-frame Inter-chr q14.11 q26.2 Seq+ 82992 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEBP4-UNC5D PEBP4 chr8 22724843 - UNC5D chr8 35549292 + Exonic hg38 BRCA TCGA-A2-A1FV-01A 2 5 In-Frame Intra-chr p21.3 p12 Tumor suppressor gene Seq+ 82993 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBX1-COPG2 PBX1 chr1 164563311 + COPG2 chr7 130508659 - Exonic hg38 BRCA TCGA-A2-A1FW-01A 152 1212 In-Frame Inter-chr q23.3 Oncogene Transcription factor q32.2 Seq+ 82994 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPD-AATF CPD chr17 30420983 + AATF chr17 37019005 + Exonic hg38 BRCA TCGA-A2-A1FW-01A 211 583 CDS-3'UTR Intra-chr q11.2 Tumor suppressor gene Seq+ 82995 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUFT1-PRKCA TUFT1 chr1 151540426 + PRKCA chr17 66786867 + Exonic hg38 BRCA TCGA-A2-A1FW-01A 143 436 In-Frame Inter-chr q21.3 q24.2 Seq+ 82996 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBED6-TMCC2 ZBED6 chr1 203831771 + TMCC2 chr1 205268950 + Exonic hg38 BRCA TCGA-A2-A1FW-01A 56 391 3'UTR-CDS Intra-chr q32.1 Transcription factor q32.1 82997 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H11A-TMCC2 ZC3H11A chr1 203831771 + TMCC2 chr1 205268950 + Exonic hg38 BRCA TCGA-A2-A1FW-01A 56 391 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 82998 ChimerSeq TCGA FAWG TCGA_RNA-Seq POGK-FMOD POGK chr1 166841088 + FMOD chr1 203342494 - Exonic hg38 BRCA TCGA-A2-A1FW-01A 52 158 In-Frame Intra-chr q24.1 Transcription factor q32.1 Seq+ 82999 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3GAP2-CNIH4 RAB3GAP2 chr1 220210388 - CNIH4 chr1 224375795 + Exonic hg38 BRCA TCGA-A2-A1FW-01A 27 185 Out-of-frame Intra-chr q41 q42.11 Seq+ 83000 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC42SE1-TNKS CDC42SE1 chr1 151059479 - TNKS chr8 9761516 + Exonic hg38 BRCA TCGA-A2-A1FW-01A 30 128 5'UTR-5'UTR Inter-chr q21.3 p23.1 Seq+ 83001 ChimerSeq TCGA FAWG TCGA_RNA-Seq VMP1-RNFT1 VMP1 chr17 59773885 + RNFT1 chr17 59954146 - Exonic hg38 BRCA TCGA-A2-A1FW-01A 16 148 In-Frame Intra-chr q23.1 q23.1 Seq+ 83002 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATRN-RNF24 ATRN chr20 3576997 + RNF24 chr20 3935073 - Exonic hg38 BRCA TCGA-A2-A1FW-01A 16 67 Out-of-frame Intra-chr p13 p13 Seq+ 83003 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKS1-SPAG9 MKS1 chr17 58210659 - SPAG9 chr17 51031722 - Exonic hg38 BRCA TCGA-A2-A1FW-01A 8 84 Out-of-frame Intra-chr q22 q21.33 Seq+ 83004 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC6C-PLCB4 TNRC6C chr17 78083166 + PLCB4 chr20 9453347 + Exonic hg38 BRCA TCGA-A2-A1FW-01A 9 57 In-Frame Inter-chr q25.3 p12.3 Seq+ 83005 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACBD6-CHIT1 ACBD6 chr1 180413366 - CHIT1 chr1 203240658 - Exonic hg38 BRCA TCGA-A2-A1FW-01A 9 51 CDS-5'UTR Intra-chr q25.3 q32.1 83006 ChimerSeq TCGA FAWG TCGA_RNA-Seq GON4L-PIPOX GON4L chr1 155821474 - PIPOX chr17 29044859 + Exonic hg38 BRCA TCGA-A2-A1FW-01A 7 55 In-Frame Inter-chr q22 q11.2 Seq+ 83007 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNLL2-SEPT4 DYNLL2 chr17 58083683 + SEPT4 chr17 58526313 - Exonic hg38 BRCA TCGA-A2-A1FW-01A 11 38 Out-of-frame Intra-chr q22 q22 Tumor suppressor gene Seq+ 83008 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCG1-BPIFB1 PLCG1 chr20 41137858 + BPIFB1 chr20 33286033 + Exonic hg38 BRCA TCGA-A2-A1FW-01A 9 27 CDS-5'UTR Intra-chr q12 Oncogene q11.21 Seq+ 83009 ChimerSeq TCGA FAWG TCGA_RNA-Seq RABGAP1L-ACBD6 RABGAP1L chr1 174637488 + ACBD6 chr1 180397605 - Exonic hg38 BRCA TCGA-A2-A1FW-01A 7 21 In-Frame Intra-chr q25.1 q25.3 Seq+ 83010 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM5B-RABGAP1L KDM5B chr1 202773118 - RABGAP1L chr1 174370979 + Exonic hg38 BRCA TCGA-A2-A1FW-01A 8 13 Out-of-frame Intra-chr q32.1 Transcription factor q25.1 Seq+ 83011 ChimerSeq TCGA FAWG TCGA_RNA-Seq C20orf194-TDRD10 C20orf194 chr20 3374048 - TDRD10 chr1 154542024 + Exonic hg38 BRCA TCGA-A2-A1FW-01A 7 16 In-Frame Inter-chr p13 q21.3 Seq+ 83012 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACBD6-IVNS1ABP ACBD6 chr1 180397516 - IVNS1ABP chr1 185305643 - Exonic hg38 BRCA TCGA-A2-A1FW-01A 3 29 In-Frame Intra-chr q25.3 q25.3 Seq+ 83013 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPD-RABIF CPD chr17 30421891 + RABIF chr1 202879588 - Exonic hg38 BRCA TCGA-A2-A1FW-01A 3 28 Out-of-frame Inter-chr q11.2 Tumor suppressor gene q32.1 Seq+ 83014 ChimerSeq TCGA FAWG TCGA_RNA-Seq NBPF12-USP32 NBPF12 chr1 146939012 + USP32 chr17 60271481 - Exonic hg38 BRCA TCGA-A2-A1FW-01A 4 23 5'UTR-CDS Inter-chr q21.1 q23.2 83015 ChimerSeq TCGA FAWG TCGA_RNA-Seq VMP1-RNF24 VMP1 chr17 59731522 + RNF24 chr20 3964024 - Exonic hg38 BRCA TCGA-A2-A1FW-01A 5 18 Out-of-frame Inter-chr q23.1 p13 Seq+ 83016 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-CA4 BCAS3 chr17 61084564 + CA4 chr17 60170551 + Exonic hg38 BRCA TCGA-A2-A1FW-01A 5 15 CDS-5'UTR Intra-chr q23.2 q23.1 Seq+ 83017 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHM1P1-UTP18 PLEKHM1P1 chr17 64785222 - UTP18 chr17 51280005 + Exonic hg38 BRCA TCGA-A2-A1FW-01A 5 8 3'UTR-CDS Intra-chr q24.1 q21.33 83018 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC2-RNF2 TANC2 chr17 63267873 + RNF2 chr1 185087552 + Exonic hg38 BRCA TCGA-A2-A1FW-01A 5 8 CDS-5'UTR Inter-chr q23.2 q25.3 Oncogene Seq+ 83019 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBIN-ZBTB10 ERBIN chr5 65994864 + ZBTB10 chr8 80499494 + Exonic hg38 BRCA TCGA-A2-A1FW-01A 2 14 Out-of-frame Inter-chr q12.3 q21.13 Transcription factor 83020 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-DISP1 BCAS3 chr17 60990235 + DISP1 chr1 222942807 + Exonic hg38 BRCA TCGA-A2-A1FW-01A 4 2 CDS-5'UTR Inter-chr q23.2 q41 Seq+ 83021 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPZL1-PDE4DIP MPZL1 chr1 167722242 + PDE4DIP chr1 148937747 + Exonic hg38 BRCA TCGA-A2-A1FW-01A 3 4 Out-of-frame Intra-chr q24.2 q21.2 Oncogene Seq+ 83022 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCA-CRYBA1 PRKCA chr17 66306127 + CRYBA1 chr17 29249142 + Exonic hg38 BRCA TCGA-A2-A1FW-01A 2 7 In-Frame Intra-chr q24.2 q11.2 Seq+ 83023 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KB1-MAP3K3 RPS6KB1 chr17 59945518 + MAP3K3 chr17 63646034 + Exonic hg38 BRCA TCGA-A2-A1FW-01A 2 6 Out-of-frame Intra-chr q23.1 Oncogene q23.3 STE:STE11 Seq+ 83024 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRCA2-N4BP2L1 BRCA2 chr13 32380145 + N4BP2L1 chr13 32420576 - Exonic hg38 BRCA TCGA-A2-A1FW-01A 1 9 CDS-5'UTR Intra-chr q13.1 Oncogene Tumor suppressor gene q13.1 83025 ChimerSeq TCGA FAWG TCGA_RNA-Seq HECTD2-GLRX3 HECTD2 chr10 91410576 + GLRX3 chr10 130180113 + Exonic hg38 BRCA TCGA-A2-A1FW-01A 1 8 CDS-3'UTR Intra-chr q23.32 q26.3 Seq+ 83026 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLRX3-C10orf11 GLRX3 chr10 130175089 + C10orf11 chr10 76557209 + Exonic hg38 BRCA TCGA-A2-A1FW-01A 1 6 Out-of-frame Intra-chr q26.3 Seq+ 83027 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKIRIN2-ANKRD55 AKIRIN2 chr6 87701450 - ANKRD55 chr5 56183634 - Exonic hg38 BRCA TCGA-A2-A1FW-01A 1 2 In-Frame Inter-chr q15 q11.2 Seq+ 83028 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMED5-HFM1 TMED5 chr1 93180054 - HFM1 chr1 91353152 - Exonic hg38 BRCA TCGA-A2-A1FX-01A 6 19 Out-of-frame Intra-chr p22.1 p22.2 Seq+ 83029 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKP3-C11orf98 PKP3 chr11 397662 + C11orf98 chr11 62664973 - Exonic hg38 BRCA TCGA-A2-A1FX-01A 1 1 In-Frame Intra-chr p15.5 q12.3 83030 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBP2-EFCAB6 OSBP2 chr22 30893733 + EFCAB6 chr22 43765393 - Exonic hg38 BRCA TCGA-A2-A1G0-01A 1 3 In-Frame Intra-chr q12.2 q13.31 83031 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR2A-ALOX12 POLR2A chr17 7484857 + ALOX12 chr17 6999257 + Exonic hg38 BRCA TCGA-A2-A1G1-01A 62 95 3'UTR-CDS Intra-chr p13.1 p13.1 Seq+ 83032 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-MSL1 FBXL20 chr17 39297127 - MSL1 chr17 40134279 + Exonic hg38 BRCA TCGA-A2-A1G1-01A 44 159 In-Frame Intra-chr q12 q21.1 Seq+ 83033 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD3-NFIX STARD3 chr17 39653750 + NFIX chr19 13025021 + Exonic hg38 BRCA TCGA-A2-A1G1-01A 5 85 In-Frame Inter-chr q12 p13.13 Transcription factor Seq+ 83034 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-SYNRG FBXL20 chr17 39297127 - SYNRG chr17 37554059 - Exonic hg38 BRCA TCGA-A2-A1G1-01A 11 55 CDS-5'UTR Intra-chr q12 Seq+ 83035 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL23-TCAP RPL23 chr17 38849657 - TCAP chr17 39665895 + Exonic hg38 BRCA TCGA-A2-A1G1-01A 16 34 Out-of-frame Intra-chr q12 q12 83036 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIX-HNF1B NFIX chr19 13095729 + HNF1B chr17 37710663 - Exonic hg38 BRCA TCGA-A2-A1G1-01A 6 21 3'UTR-5'UTR Inter-chr p13.13 Transcription factor q12 Transcription factor Seq+ 83037 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIFK-BTBD2 NIFK chr2 121736746 - BTBD2 chr19 1997463 - Exonic hg38 BRCA TCGA-A2-A1G1-01A 5 24 Out-of-frame Inter-chr q14.3 p13.3 83038 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASC3-ZNF254 CASC3 chr17 40141607 + ZNF254 chr19 24126254 + Exonic hg38 BRCA TCGA-A2-A1G1-01A 4 18 Out-of-frame Inter-chr q21.1 p12 Transcription factor Seq+ 83039 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6R2-EMID1 PPP6R2 chr22 50406875 + EMID1 chr22 29231020 + Exonic hg38 BRCA TCGA-A2-A1G1-01A 2 23 In-Frame Intra-chr q13.33 q12.2 Seq+ 83040 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD2-ISG20L2 BTBD2 chr19 1986896 - ISG20L2 chr1 156727268 - Exonic hg38 BRCA TCGA-A2-A1G1-01A 3 11 Out-of-frame Inter-chr p13.3 q23.1 Seq+ 83041 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-PSMB3 ERBB2 chr17 39723660 + PSMB3 chr17 38764119 + Exonic hg38 BRCA TCGA-A2-A1G1-01A 1 3 CDS-3'UTR Intra-chr q12 Oncogene Seq+ 83042 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK2-GLYATL2 MARK2 chr11 63839560 + GLYATL2 chr11 58844524 - Exonic hg38 BRCA TCGA-A2-A1G4-01A 146 491 CDS-5'UTR Intra-chr q13.1 CAMK:CAMKL q12.1 Seq+ 83043 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-MARK2 PPFIA1 chr11 70272436 + MARK2 chr11 63895159 + Exonic hg38 BRCA TCGA-A2-A1G4-01A 33 82 In-Frame Intra-chr q13.3 q13.1 CAMK:CAMKL Seq+ 83044 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF121-VPS37C RNF121 chr11 71960891 + VPS37C chr11 61134207 - Exonic hg38 BRCA TCGA-A2-A1G4-01A 25 58 In-Frame Intra-chr q13.4 q12.2 Seq+ 83045 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK3-BAG4 SHANK3 chr22 50684651 + BAG4 chr8 38192688 + Exonic hg38 BRCA TCGA-A2-A1G4-01A 1 14 3'UTR-CDS Inter-chr p11.23 83046 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFAF6-LSM1 NDUFAF6 chr8 94895927 + LSM1 chr8 38172033 - Exonic hg38 BRCA TCGA-A2-A1G4-01A 1 11 5'UTR-CDS Intra-chr q22.1 p11.23 83047 ChimerSeq TCGA FAWG TCGA_RNA-Seq INCENP-ANKFN1 INCENP chr11 62152551 + ANKFN1 chr17 56510473 + Exonic hg38 BRCA TCGA-A2-A259-01A 1 6 3'UTR-CDS Inter-chr q12.3 q22 83048 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSE1-HSD17B2 GSE1 chr16 85634132 + HSD17B2 chr16 82068170 + Exonic hg38 BRCA TCGA-A2-A25A-01A 3 5 In-Frame Intra-chr q24.1 q23.3 Seq+ 83049 ChimerSeq TCGA FAWG TCGA_RNA-Seq H2AFY2-SRGN H2AFY2 chr10 70091954 + SRGN chr10 69097084 + Exonic hg38 BRCA TCGA-A2-A25A-01A 1 6 Out-of-frame Intra-chr q22.1 q22.1 83050 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAG5-BLMH SPAG5 chr17 28598510 - BLMH chr17 30249168 - Exonic hg38 BRCA TCGA-A2-A25B-01A 41 105 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 83051 ChimerSeq TCGA FAWG TCGA_RNA-Seq RCC2-PADI4 RCC2 chr1 17429106 - PADI4 chr1 17354533 + Exonic hg38 BRCA TCGA-A2-A25B-01A 14 63 5'UTR-3'UTR Intra-chr Seq+ 83052 ChimerSeq TCGA FAWG TCGA_RNA-Seq FLOT2-PEX12 FLOT2 chr17 28888945 - PEX12 chr17 35577591 - Exonic hg38 BRCA TCGA-A2-A25B-01A 23 23 Out-of-frame Intra-chr q11.2 q12 Seq+ 83053 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX42-BRIP1 DDX42 chr17 63806654 + BRIP1 chr17 61808757 - Exonic hg38 BRCA TCGA-A2-A25B-01A 11 47 In-Frame Intra-chr q23.3 q23.2 Oncogene Seq+ 83054 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAST4-NLN MAST4 chr5 67153580 + NLN chr5 65822781 + Exonic hg38 BRCA TCGA-A2-A25B-01A 12 37 In-Frame Intra-chr q12.3 AGC:MAST q12.3 Seq+ 83055 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADNP-DPM1 ADNP chr20 50928651 - DPM1 chr20 50945923 - Exonic hg38 BRCA TCGA-A2-A25B-01A 11 16 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.13 Seq+ 83056 ChimerSeq TCGA FAWG TCGA_RNA-Seq RABEP1-ASPA RABEP1 chr17 5282520 + ASPA chr17 3494350 + Exonic hg38 BRCA TCGA-A2-A25B-01A 6 18 In-Frame Intra-chr p13.2 p13.2 Seq+ 83057 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNC1-BPTF PITPNC1 chr17 67578257 + BPTF chr17 67918714 + Exonic hg38 BRCA TCGA-A2-A25B-01A 5 21 Out-of-frame Intra-chr q24.2 q24.2 Transcription factor Seq+ 83058 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP36-OFCC1 USP36 chr17 78812860 - OFCC1 chr6 9705442 - Exonic hg38 BRCA TCGA-A2-A25B-01A 3 15 Out-of-frame Inter-chr q25.3 p24.3 Seq+ 83059 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMG6-WDR20 SMG6 chr17 2303633 - WDR20 chr14 102194938 + Exonic hg38 BRCA TCGA-A2-A25B-01A 2 11 Out-of-frame Inter-chr p13.3 q32.31 Seq+ 83060 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP2-MAP3K13 SENP2 chr3 185586514 + MAP3K13 chr3 185472975 + Exonic hg38 BRCA TCGA-A2-A25B-01A 3 3 In-Frame Intra-chr q27.2 q27.2 Seq+ 83061 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC38A11-RABGAP1L SLC38A11 chr2 164908640 - RABGAP1L chr1 174957457 + Exonic hg38 BRCA TCGA-A2-A25B-01A 2 5 In-Frame Inter-chr q24.3 q25.1 Seq+ 83062 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAG2-XIAP STAG2 chrX 123960866 + XIAP chrX 123900493 + Exonic hg38 BRCA TCGA-A2-A25B-01A 1 6 5'UTR-5'UTR Intra-chr q25 Oncogene q25 Seq+ 83063 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYBRD1-SLC38A11 CYBRD1 chr2 171522738 + SLC38A11 chr2 164915973 - Exonic hg38 BRCA TCGA-A2-A25B-01A 1 5 Out-of-frame Intra-chr q31.1 q24.3 83064 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSRP1-ANKRD13B NSRP1 chr17 30118173 + ANKRD13B chr17 29607742 + Exonic hg38 BRCA TCGA-A2-A25B-01A 1 5 In-Frame Intra-chr q11.2 q11.2 Seq+ 83065 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP21-NECTIN4 USP21 chr1 161164250 + NECTIN4 chr1 161072885 - Exonic hg38 BRCA TCGA-A2-A25B-01A 1 4 In-Frame Intra-chr q23.3 q23.3 83066 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANSL3-UFC1 KANSL3 chr2 96608508 - UFC1 chr1 161153926 + Exonic hg38 BRCA TCGA-A2-A25B-01A 1 3 CDS-5'UTR Inter-chr q11.2 q23.3 83067 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEX1-NBEA PEX1 chr7 92499704 - NBEA chr13 35040933 + Exonic hg38 BRCA TCGA-A2-A25C-01A 2 10 In-Frame Inter-chr q21.2 q13.3 Seq+ 83068 ChimerSeq TCGA FAWG TCGA_RNA-Seq NHSL1-SPATA13 NHSL1 chr6 138496219 - SPATA13 chr13 24222819 + Exonic hg38 BRCA TCGA-A2-A25C-01A 1 4 Out-of-frame Inter-chr q24.1 q12.12 83069 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP2A1-DHDH AP2A1 chr19 49767200 + DHDH chr19 48939449 + Exonic hg38 BRCA TCGA-A2-A25D-01A 152 228 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 83070 ChimerSeq TCGA FAWG TCGA_RNA-Seq HAUS6-PLIN2 HAUS6 chr9 19070219 - PLIN2 chr9 19108747 - Exonic hg38 BRCA TCGA-A2-A25D-01A 47 101 CDS-5'UTR Intra-chr p22.1 p22.1 Seq+ 83071 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTCH2-FNBP4 MTCH2 chr11 47638699 - FNBP4 chr11 47720086 - Exonic hg38 BRCA TCGA-A2-A25D-01A 7 31 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 83072 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOSC1-SORCS1 EXOSC1 chr10 97437191 - SORCS1 chr10 106574181 - Exonic hg38 BRCA TCGA-A2-A25D-01A 5 24 3'UTR-3'UTR Intra-chr q24.1 q25.1 Seq+ 83073 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT6A-ANK1 KAT6A chr8 42048378 - ANK1 chr8 41758137 - Exonic hg38 BRCA TCGA-A2-A25D-01A 4 11 In-Frame Intra-chr p11.21 Oncogene p11.21 Seq+ 83074 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNMA1-MSMB KCNMA1 chr10 77110173 - MSMB chr10 46040091 - Exonic hg38 BRCA TCGA-A2-A25D-01A 4 4 In-Frame Intra-chr q22.3 q11.22 Tumor suppressor gene Seq+ 83075 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCY5-HACD2 ADCY5 chr3 123447412 - HACD2 chr3 123502681 - Exonic hg38 BRCA TCGA-A2-A25D-01A 2 9 In-Frame Intra-chr q21.1 q21.1 83076 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCM9-FAM184A MCM9 chr6 118934891 - FAM184A chr6 118960184 - Exonic hg38 BRCA TCGA-A2-A25D-01A 2 7 5'UTR-CDS Intra-chr q22.31 Tumor suppressor gene q22.31 Seq+ 83077 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNIP1-MEIKIN FNIP1 chr5 131796830 - MEIKIN chr5 131807258 - Exonic hg38 BRCA TCGA-A2-A25D-01A 2 5 Out-of-frame Intra-chr q31.1 q31.1 83078 ChimerSeq TCGA FAWG TCGA_RNA-Seq TYW1-TPST1 TYW1 chr7 67055887 + TPST1 chr7 66286511 + Exonic hg38 BRCA TCGA-A2-A25E-01A 5 4 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 83079 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC9-SLC45A4 TRAPPC9 chr8 140397620 - SLC45A4 chr8 141219829 - Exonic hg38 BRCA TCGA-A2-A25E-01A 1 4 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 83080 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNE-ERP27 GNE chr9 36276894 - ERP27 chr12 14921048 - Exonic hg38 BRCA TCGA-A2-A25F-01A 32 289 In-Frame Inter-chr p13.3 p12.3 Seq+ 83081 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS37B-VPS33A VPS37B chr12 122895952 - VPS33A chr12 122242508 - Exonic hg38 BRCA TCGA-A2-A25F-01A 19 31 In-Frame Intra-chr q24.31 q24.31 83082 ChimerSeq TCGA FAWG TCGA_RNA-Seq LANCL2-TFDP2 LANCL2 chr7 55401320 + TFDP2 chr3 141963963 - Exonic hg38 BRCA TCGA-A2-A25F-01A 15 30 In-Frame Inter-chr p11.2 q23 Transcription factor Seq+ 83083 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFDP2-LANCL2 TFDP2 chr3 142093061 - LANCL2 chr7 55398423 + Exonic hg38 BRCA TCGA-A2-A25F-01A 7 28 In-Frame Inter-chr q23 Transcription factor p11.2 Seq+ 83084 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELSR1-MAFF CELSR1 chr22 46372883 - MAFF chr22 38213823 + Exonic hg38 BRCA TCGA-A2-A25F-01A 2 6 CDS-5'UTR Intra-chr q13.31 q13.1 Transcription factor Seq+ 83085 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIXDC1-C11orf1 DIXDC1 chr11 111929910 + C11orf1 chr11 111883771 + Exonic hg38 BRCA TCGA-A2-A25F-01A 2 5 In-Frame Intra-chr q23.1 q23.1 Seq+ 83086 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO32-ANXA13 FBXO32 chr8 123506392 - ANXA13 chr8 123712753 - Exonic hg38 BRCA TCGA-A2-A25F-01A 2 5 In-Frame Intra-chr q24.13 Tumor suppressor gene q24.13 Seq+ 83087 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM1-SDC3 PUM1 chr1 31059204 - SDC3 chr1 30878740 - Exonic hg38 BRCA TCGA-A2-A25F-01A 1 5 In-Frame Intra-chr p35.2 p35.2 Seq+ 83088 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNPO2-RTBDN TNPO2 chr19 12722477 - RTBDN chr19 12829997 - Exonic hg38 BRCA TCGA-A2-A25F-01A 1 3 5'UTR-5'UTR Intra-chr p13.13 p13.13 83089 ChimerSeq TCGA FAWG TCGA_RNA-Seq MANF-SETD2 MANF chr3 51386335 + SETD2 chr3 47067118 - Exonic hg38 BRCA TCGA-A2-A3KC-01A 16 44 In-Frame Intra-chr p21.2 p21.31 Oncogene Tumor suppressor gene Seq+ 83090 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS3-TSKU RPS3 chr11 75402446 + TSKU chr11 76795609 + Exonic hg38 BRCA TCGA-A2-A3KC-01A 13 50 Out-of-frame Intra-chr q13.4 q13.5 Seq+ 83091 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-HSD3B2 PPFIA1 chr11 70348420 + HSD3B2 chr1 119415331 + Exonic hg38 BRCA TCGA-A2-A3KC-01A 4 51 5'UTR-5'UTR Inter-chr q13.3 p12 Seq+ 83092 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL18-TEX264 KLHL18 chr3 47283094 + TEX264 chr3 51684413 + Exonic hg38 BRCA TCGA-A2-A3KC-01A 3 26 In-Frame Intra-chr p21.31 p21.2 Seq+ 83093 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARRB1-GAB2 ARRB1 chr11 75351588 - GAB2 chr11 78280901 - Exonic hg38 BRCA TCGA-A2-A3KC-01A 4 9 Out-of-frame Intra-chr q13.4 q14.1 Seq+ 83094 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF121-ESRRG RNF121 chr11 71929124 + ESRRG chr1 216939673 - Exonic hg38 BRCA TCGA-A2-A3KC-01A 1 15 5'UTR-5'UTR Inter-chr q13.4 q41 Transcription factor Seq+ 83095 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF17-COA4 ARHGEF17 chr11 73311830 + COA4 chr11 73873394 - Exonic hg38 BRCA TCGA-A2-A3KC-01A 2 10 CDS-5'UTR Intra-chr q13.4 q13.4 Seq+ 83096 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL21-FAM168A MRPL21 chr11 68897927 - FAM168A chr11 73411536 - Exonic hg38 BRCA TCGA-A2-A3KC-01A 1 14 In-Frame Intra-chr q13.3 q13.4 Seq+ 83097 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-SHANK2 UVRAG chr11 76016980 + SHANK2 chr11 71075275 - Exonic hg38 BRCA TCGA-A2-A3KC-01A 3 2 Out-of-frame Intra-chr q13.5 Tumor suppressor gene q13.4 Seq+ 83098 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESR1-ASPH ESR1 chr6 151880771 + ASPH chr8 61503509 - Exonic hg38 BRCA TCGA-A2-A3KD-01A 146 727 Out-of-frame Inter-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q12.3 Seq+ 83099 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASPH-RSF1 ASPH chr8 61517528 - RSF1 chr11 77702495 - Exonic hg38 BRCA TCGA-A2-A3KD-01A 12 15 Out-of-frame Inter-chr q12.3 q14.1 Seq+ 83100 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYB-UMAD1 MYB chr6 135203324 + UMAD1 chr7 7676102 + Exonic hg38 BRCA TCGA-A2-A3XS-01A 3 18 5'UTR-5'UTR Inter-chr q23.3 Oncogene Transcription factor p21.3 83101 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED10-KIF21A MED10 chr5 6377166 - KIF21A chr12 39358373 - Exonic hg38 BRCA TCGA-A2-A3XS-01A 1 7 In-Frame Inter-chr p15.31 q12 83102 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP11A-MCF2L ATP11A chr13 112690455 + MCF2L chr13 113074444 + Exonic hg38 BRCA TCGA-A2-A3XT-01A 17 19 In-Frame Intra-chr q34 q34 Seq+ 83103 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASC4-CTDSPL2 CASC4 chr15 44289356 + CTDSPL2 chr15 44458991 + Exonic hg38 BRCA TCGA-A2-A3XT-01A 1 9 5'UTR-5'UTR Intra-chr q15.3 q15.3 83104 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSPP1-VRK1 CSPP1 chr8 67137603 + VRK1 chr14 96833467 + Exonic hg38 BRCA TCGA-A2-A3XT-01A 2 1 CDS-5'UTR Inter-chr q13.1 q32.2 CK1:VRK Seq+ 83105 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL13-RNF130 MRPL13 chr8 120413991 - RNF130 chr5 180040647 - Exonic hg38 BRCA TCGA-A2-A3XT-01A 1 2 Out-of-frame Inter-chr q24.12 q35.3 83106 ChimerSeq TCGA FAWG TCGA_RNA-Seq OS9-MUCL1 OS9 chr12 57719182 + MUCL1 chr12 54856770 + Exonic hg38 BRCA TCGA-A2-A3XV-01A 2 2 In-Frame Intra-chr q13.3 q13.2 83107 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF12-C14orf2 ARHGEF12 chr11 120475507 + C14orf2 chr14 103915189 - Exonic hg38 BRCA TCGA-A2-A3XV-01A 1 1 Out-of-frame Inter-chr q23.3 Tumor suppressor gene q32.33 83108 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL4I1-KCNQ2 IL4I1 chr19 49927694 - KCNQ2 chr20 63445364 - Exonic hg38 BRCA TCGA-A2-A3XW-01A 88 174 5'UTR-5'UTR Inter-chr q13.33 Seq+ 83109 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP62-KCNQ2 NUP62 chr19 49927694 - KCNQ2 chr20 63445364 - Exonic hg38 BRCA TCGA-A2-A3XW-01A 88 174 5'UTR-5'UTR Inter-chr q13.33 Seq+ 83110 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL5-RHOG OSBPL5 chr11 3126473 - RHOG chr11 3828206 - Exonic hg38 BRCA TCGA-A2-A3XW-01A 14 35 CDS-5'UTR Intra-chr p15.4 p15.4 Seq+ 83111 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAU1-GPHB5 STAU1 chr20 49174195 - GPHB5 chr14 63313116 - Exonic hg38 BRCA TCGA-A2-A3XW-01A 4 5 5'UTR-CDS Inter-chr q13.13 q23.2 Seq+ 83112 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIX1-CYB5R2 SIX1 chr14 60648630 - CYB5R2 chr11 7668561 - Exonic hg38 BRCA TCGA-A2-A3XW-01A 3 7 Out-of-frame Inter-chr q23.1 Transcription factor p15.4 Tumor suppressor gene Seq+ 83113 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL2-ADCK1 OSBPL2 chr20 62285908 + ADCK1 chr14 77819097 + Exonic hg38 BRCA TCGA-A2-A3XW-01A 3 6 Out-of-frame Inter-chr q13.33 q24.3 Atypical:ABC1 83114 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRR1-MTHFD1 LRR1 chr14 49608121 + MTHFD1 chr14 64415358 + Exonic hg38 BRCA TCGA-A2-A3XW-01A 1 8 Out-of-frame Intra-chr q21.3 q23.3 Seq+ 83115 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL7L1-KLC4 RPL7L1 chr6 42886470 + KLC4 chr6 43043058 + Exonic hg38 BRCA TCGA-A2-A3XX-01A 23 130 5'UTR-5'UTR Intra-chr p21.1 p21.1 83116 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPS1-ZNRF2 TRPS1 chr8 115668545 - ZNRF2 chr7 30355728 + Exonic hg38 BRCA TCGA-A2-A3XX-01A 3 38 5'UTR-CDS Inter-chr q23.3 Transcription factor p14.3 Seq+ 83117 ChimerSeq TCGA FAWG TCGA_RNA-Seq URI1-IFNL1 URI1 chr19 29971227 + IFNL1 chr19 39296805 + Exonic hg38 BRCA TCGA-A2-A3XX-01A 4 30 Out-of-frame Intra-chr q12 q13.2 Seq+ 83118 ChimerSeq TCGA FAWG TCGA_RNA-Seq E2F3-AKIRIN2 E2F3 chr6 20403832 + AKIRIN2 chr6 87681763 - Exonic hg38 BRCA TCGA-A2-A3XX-01A 1 19 Out-of-frame Intra-chr p22.3 Tumor suppressor gene Transcription factor q15 Seq+ 83119 ChimerSeq TCGA FAWG TCGA_RNA-Seq NXN-MIR3945HG NXN chr17 979319 - MIR3945HG chr4 184855573 - Exonic hg38 BRCA TCGA-A2-A3XX-01A 3 6 CDS-3'UTR Inter-chr p13.3 q35.1 83120 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC5L-IT1 CDC5L chr6 44426724 + IT1 chr6 20439957 + Exonic hg38 BRCA TCGA-A2-A3XX-01A 1 13 Out-of-frame Intra-chr p21.1 Transcription factor 83121 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF610-UQCRFS1 ZNF610 chr19 52354379 + UQCRFS1 chr19 29208158 - Exonic hg38 BRCA TCGA-A2-A3XX-01A 1 1 In-Frame Intra-chr q13.41 Transcription factor q12 83122 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTCF-NUTF2 CTCF chr16 67571264 + NUTF2 chr16 67865102 + Exonic hg38 BRCA TCGA-A2-A3XY-01A 26 144 5'UTR-5'UTR Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 Seq+ 83123 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC37A1-PCNT SLC37A1 chr21 42567058 + PCNT chr21 46411189 + Exonic hg38 BRCA TCGA-A2-A3XY-01A 3 20 In-Frame Intra-chr q22.3 q22.3 Seq+ 83124 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD2-ULK4 SETD2 chr3 47113876 - ULK4 chr3 41463253 - Exonic hg38 BRCA TCGA-A2-A3XY-01A 3 9 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene p22.1 Other:ULK Seq+ 83125 ChimerSeq TCGA FAWG TCGA_RNA-Seq FYCO1-AS3 FYCO1 chr3 45995722 - AS3 chr3 29264757 - Exonic hg38 BRCA TCGA-A2-A3XY-01A 3 8 Out-of-frame Intra-chr p21.31 Tumor suppressor gene 83126 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIM2-MIR99AHG SIM2 chr21 36731151 + MIR99AHG chr21 16071114 + Exonic hg38 BRCA TCGA-A2-A3XY-01A 1 16 CDS-5'UTR Intra-chr q22.13 Transcription factor q21.1 83127 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCE1-HELZ SMARCE1 chr17 40642455 - HELZ chr17 67087081 - Exonic hg38 BRCA TCGA-A2-A3XZ-01A 95 94 In-Frame Intra-chr q21.2 q24.2 Seq+ 83128 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-16 BCAS3 chr17 60747279 + 16 chr17 41102201 - Exonic hg38 BRCA TCGA-A2-A3XZ-01A 15 45 Out-of-frame Intra-chr q23.2 83129 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC24D-CFI SEC24D chr4 118797683 - CFI chr4 109766824 - Exonic hg38 BRCA TCGA-A2-A3XZ-01A 8 15 In-Frame Intra-chr q26 q25 Seq+ 83130 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNC1-ANXA10 PITPNC1 chr17 67378202 + ANXA10 chr4 168162528 + Exonic hg38 BRCA TCGA-A2-A3XZ-01A 2 19 In-Frame Inter-chr q24.2 q32.3 Seq+ 83131 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCA5-BCAS3 ABCA5 chr17 69327052 - BCAS3 chr17 60709219 + Exonic hg38 BRCA TCGA-A2-A3XZ-01A 2 6 5'UTR-CDS Intra-chr q24.3 q23.2 Seq+ 83132 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNC1-B4GALNT2 PITPNC1 chr17 67675542 + B4GALNT2 chr17 49141247 + Exonic hg38 BRCA TCGA-A2-A3XZ-01A 1 2 Out-of-frame Intra-chr q24.2 q21.32 83133 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF732-DAB1 ZNF732 chr4 295438 - DAB1 chr1 57145429 - Exonic hg38 BRCA TCGA-A2-A3Y0-01A 6 72 In-Frame Inter-chr p16.3 Transcription factor p32.1 Seq+ 83134 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTBN2-FGF19 SPTBN2 chr11 66686398 - FGF19 chr11 69699576 - Exonic hg38 BRCA TCGA-A2-A3Y0-01A 12 47 In-Frame Intra-chr q13.2 q13.3 Seq+ 83135 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF12-TMEM255B TCF12 chr15 57263274 + TMEM255B chr13 113766115 + Exonic hg38 BRCA TCGA-A2-A3Y0-01A 5 5 Out-of-frame Inter-chr q21.3 Oncogene Transcription factor Seq+ 83136 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS17-LRRC28 ADAMTS17 chr15 100048857 - LRRC28 chr15 99361336 + Exonic hg38 BRCA TCGA-A2-A4RW-01A 18 44 In-Frame Intra-chr q26.3 q26.3 Seq+ 83137 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRK1-ADAMTS17 LRRK1 chr15 100989398 + ADAMTS17 chr15 100051731 - Exonic hg38 BRCA TCGA-A2-A4RW-01A 7 31 In-Frame Intra-chr q26.3 TKL:LRRK q26.3 Seq+ 83138 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAST2-C6orf52 MAST2 chr1 45882395 + C6orf52 chr6 10683232 - Exonic hg38 BRCA TCGA-A2-A4RW-01A 3 25 5'UTR-5'UTR Inter-chr p34.1 AGC:MAST p24.2 Seq+ 83139 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH1-NADK2 CDH1 chr16 68738411 + NADK2 chr5 36201161 - Exonic hg38 BRCA TCGA-A2-A4RW-01A 4 20 Out-of-frame Inter-chr q22.1 Oncogene Tumor suppressor gene p13.2 Seq+ 83140 ChimerSeq TCGA FAWG TCGA_RNA-Seq NADK2-CDH1 NADK2 chr5 36207170 - CDH1 chr16 68801670 + Exonic hg38 BRCA TCGA-A2-A4RW-01A 1 10 Out-of-frame Inter-chr p13.2 q22.1 Oncogene Tumor suppressor gene 83141 ChimerSeq TCGA FAWG TCGA_RNA-Seq NHLRC2-ENKUR NHLRC2 chr10 113858680 + ENKUR chr10 25061369 - Exonic hg38 BRCA TCGA-A2-A4RW-01A 1 3 CDS-5'UTR Intra-chr q25.3 p12.1 83142 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNA14-TRMO GNA14 chr9 77434368 - TRMO chr9 97904992 - Exonic hg38 BRCA TCGA-A2-A4RW-01A 1 2 Out-of-frame Intra-chr q21.2 q22.33 83143 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMPSTE24-YTHDF2 ZMPSTE24 chr1 40272035 + YTHDF2 chr1 28768929 + Exonic hg38 BRCA TCGA-A2-A4RW-01A 1 2 Out-of-frame Intra-chr p34.2 p35.3 83144 ChimerSeq TCGA FAWG TCGA_RNA-Seq CATSPERB-SPTB CATSPERB chr14 91639096 - SPTB chr14 64774527 - Exonic hg38 BRCA TCGA-A2-A4RY-01A 1 5 5'UTR-CDS Intra-chr q23.3 83145 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH11-PRC1 CDH11 chr16 64971579 - PRC1 chr15 90969623 - Exonic hg38 BRCA TCGA-A2-A4S1-01A 50 310 Out-of-frame Inter-chr q21 Oncogene Tumor suppressor gene q26.1 Seq+ 83146 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLA2G6-EEF1D PLA2G6 chr22 38143105 - EEF1D chr8 143580206 - Exonic hg38 BRCA TCGA-A2-A4S1-01A 12 10 CDS-5'UTR Inter-chr q13.1 Seq+ 83147 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHPN2-BLVRB RHPN2 chr19 33021571 - BLVRB chr19 40451492 - Exonic hg38 BRCA TCGA-A2-A4S1-01A 6 13 Out-of-frame Intra-chr q13.11 q13.2 Seq+ 83148 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD12-MTHFD2L ANKRD12 chr18 9221999 + MTHFD2L chr4 74225302 + Exonic hg38 BRCA TCGA-A2-A4S3-01A 7 56 In-Frame Inter-chr p11.22 q13.3 Seq+ 83149 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELMOD3-TCF7L1 ELMOD3 chr2 85362260 + TCF7L1 chr2 85309029 + Exonic hg38 BRCA TCGA-A2-A4S3-01A 2 9 Out-of-frame Intra-chr p11.2 p11.2 Oncogene Transcription factor Seq+ 83150 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCMTD1-ST18 PCMTD1 chr8 51898930 - ST18 chr8 52246664 - Exonic hg38 BRCA TCGA-A2-A4S3-01A 1 8 5'UTR-5'UTR Intra-chr q11.23 q11.23 Transcription factor Seq+ 83151 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBL3-MTIF3 UBL3 chr13 29849512 - MTIF3 chr13 27445156 - Exonic hg38 BRCA TCGA-A7-A0CE-01A 20 32 CDS-5'UTR Intra-chr q12.3 q12.2 Seq+ 83152 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF121-CYSLTR2 RNF121 chr11 71960891 + CYSLTR2 chr13 48706817 + Exonic hg38 BRCA TCGA-A7-A0CE-01A 13 38 5'UTR-5'UTR Inter-chr q13.4 q14.2 Seq+ 83153 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO22-SNX33 FBXO22 chr15 75917394 + SNX33 chr15 75656962 + Exonic hg38 BRCA TCGA-A7-A0CG-01A 3 26 In-Frame Intra-chr q24.2 q24.2 Seq+ 83154 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRC2C-FASLG PRRC2C chr1 171485735 + FASLG chr1 172665622 + Exonic hg38 BRCA TCGA-A7-A0CG-01A 1 16 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 83155 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP6-GPR19 LRP6 chr12 12244262 - GPR19 chr12 12662470 - Exonic hg38 BRCA TCGA-A7-A0CG-01A 2 6 5'UTR-5'UTR Intra-chr p13.1 Seq+ 83156 ChimerSeq TCGA FAWG TCGA_RNA-Seq CENPO-UBXN2A CENPO chr2 24799844 + UBXN2A chr2 23999672 + Exonic hg38 BRCA TCGA-A7-A0CG-01A 1 9 Out-of-frame Intra-chr p23.3 p23.3 Seq+ 83157 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFX1-DNAJA1 NFX1 chr9 33319127 + DNAJA1 chr9 33038685 + Exonic hg38 BRCA TCGA-A7-A0CG-01A 1 9 Out-of-frame Intra-chr p13.3 Transcription factor p21.1 Seq+ 83158 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3BGR-IGSF5 SH3BGR chr21 39499915 + IGSF5 chr21 39792008 + Exonic hg38 BRCA TCGA-A7-A0CH-01A 1 3 Out-of-frame Intra-chr q22.2 q22.2 83159 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPAIN-FHIT RPAIN chr17 5422829 + FHIT chr3 59922414 - Exonic hg38 BRCA TCGA-A7-A0CJ-01A 6 78 Out-of-frame Inter-chr p13.2 p14.2 Tumor suppressor gene Seq+ 83160 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH24-HOMEZ CDH24 chr14 23054261 - HOMEZ chr14 23272828 - Exonic hg38 BRCA TCGA-A7-A0CJ-01A 9 15 Out-of-frame Intra-chr q11.2 q11.2 Transcription factor 83161 ChimerSeq TCGA FAWG TCGA_RNA-Seq TET1-ASCC1 TET1 chr10 68601034 + ASCC1 chr10 72161674 - Exonic hg38 BRCA TCGA-A7-A0CJ-01A 8 8 In-Frame Intra-chr q21.3 Oncogene Transcription factor q22.1 Seq+ 83162 ChimerSeq TCGA FAWG TCGA_RNA-Seq NINL-TGM2 NINL chr20 25510674 - TGM2 chr20 38130369 - Exonic hg38 BRCA TCGA-A7-A0CJ-01A 4 2 Out-of-frame Intra-chr p11.21 q11.23 Seq+ 83163 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPRIN2-ST8SIA1 CAPRIN2 chr12 30751071 - ST8SIA1 chr12 22070625 - Exonic hg38 BRCA TCGA-A7-A0CJ-01A 1 13 CDS-3'UTR Intra-chr p11.21 p12.1 83164 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF789-CYP3A43 ZNF789 chr7 99473056 + CYP3A43 chr7 99836453 + Exonic hg38 BRCA TCGA-A7-A0CJ-01A 1 2 5'UTR-5'UTR Intra-chr q22.1 Transcription factor q22.1 83165 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT6A-ADAM5 KAT6A chr8 42048378 - ADAM5 chr8 39401333 + Exonic hg38 BRCA TCGA-A7-A0D9-01A 258 1070 CDS-3'UTR Intra-chr p11.21 Oncogene p11.22 Seq+ 83166 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD3-RAB11FIP1 NSD3 chr8 38295795 - RAB11FIP1 chr8 37877550 - Exonic hg38 BRCA TCGA-A7-A0D9-01A 51 341 Out-of-frame Intra-chr p11.23 Tumor suppressor gene p11.23 83167 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB11FIP1-GFI1B RAB11FIP1 chr8 37861882 - GFI1B chr9 132953378 + Exonic hg38 BRCA TCGA-A7-A0D9-01A 3 7 Out-of-frame Inter-chr p11.23 q34.13 Transcription factor 83168 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESR1-GNAS ESR1 chr6 151842787 + GNAS chr20 58895612 + Exonic hg38 BRCA TCGA-A7-A0D9-01A 2 4 In-Frame Inter-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q13.32 Oncogene Seq+ 83169 ChimerSeq TCGA FAWG TCGA_RNA-Seq PROSC-DDHD2 PROSC chr8 37766355 + DDHD2 chr8 38246233 + Exonic hg38 BRCA TCGA-A7-A0D9-01A 1 4 Out-of-frame Intra-chr p11.23 Seq+ 83170 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC28-EIF4EBP1 LRRC28 chr15 99361511 + EIF4EBP1 chr8 38057081 + Exonic hg38 BRCA TCGA-A7-A0D9-01A 1 2 In-Frame Inter-chr q26.3 p11.23 83171 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAM10-FIZ1 ADAM10 chr15 58665097 - FIZ1 chr19 55597901 - Exonic hg38 BRCA TCGA-A7-A0DA-01A 27 80 CDS-5'UTR Inter-chr q21.3 q13.42 Transcription factor Seq+ 83172 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP33-TARS USP33 chr1 77759643 - TARS chr5 33445324 + Exonic hg38 BRCA TCGA-A7-A0DA-01A 26 47 5'UTR-5'UTR Inter-chr p31.1 Tumor suppressor gene p13.3 Seq+ 83173 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP1-RINT1 AGAP1 chr2 235883449 + RINT1 chr7 105563733 + Exonic hg38 BRCA TCGA-A7-A0DA-01A 23 35 In-Frame Inter-chr q37.2 q22.3 Tumor suppressor gene Seq+ 83174 ChimerSeq TCGA FAWG TCGA_RNA-Seq XRCC6-GPX5 XRCC6 chr22 41622086 + GPX5 chr6 28529451 + Exonic hg38 BRCA TCGA-A7-A0DA-01A 3 40 CDS-3'UTR Inter-chr q13.2 Seq+ 83175 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNAP47-PRSS38 SNAP47 chr1 227735499 + PRSS38 chr1 227845470 + Exonic hg38 BRCA TCGA-A7-A0DA-01A 8 5 Out-of-frame Intra-chr q42.13 q42.13 Seq+ 83176 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM14B-BAG6 TMEM14B chr6 10755232 + BAG6 chr6 31651776 - Exonic hg38 BRCA TCGA-A7-A0DA-01A 1 17 5'UTR-5'UTR Intra-chr p24.2 p21.33 83177 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE3C-DNAJB6 UBE3C chr7 157231327 + DNAJB6 chr7 157358547 + Exonic hg38 BRCA TCGA-A7-A0DA-01A 2 2 CDS-5'UTR Intra-chr q36.3 q36.3 Seq+ 83178 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R9A-SUCO PPP1R9A chr7 95268707 + SUCO chr1 172608747 + Exonic hg38 BRCA TCGA-A7-A0DA-01A 2 1 Out-of-frame Inter-chr q21.3 q24.3 Seq+ 83179 ChimerSeq TCGA FAWG TCGA_RNA-Seq UTRN-AXIN1 UTRN chr6 144700243 + AXIN1 chr16 314683 - Exonic hg38 BRCA TCGA-A7-A0DA-01A 1 3 Out-of-frame Inter-chr q24.2 p13.3 Oncogene Tumor suppressor gene 83180 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIST1H2AC-HIST1H4E HIST1H2AC chr6 26124749 + HIST1H4E chr6 26204612 + Exonic hg38 BRCA TCGA-A7-A0DA-01A 1000 1000 Out-of-frame Intra-chr p22.2 p22.2 83181 ChimerSeq TCGA FAWG TCGA_RNA-Seq CST9-MIR4300HG CST9 chr20 23603621 - MIR4300HG chr11 82356628 - Exonic hg38 BRCA TCGA-A7-A0DC-01A 20 75 CDS-3'UTR Inter-chr p11.21 q14.1 83182 ChimerSeq TCGA FAWG TCGA_RNA-Seq U1-28P U1 chr1 145465732 - 28P chr14 34556341 - Exonic hg38 BRCA TCGA-A7-A0DC-01A 3 57 Out-of-frame Inter-chr 83183 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNU6-SNORD91B RNU6 chr15 67839939 - SNORD91B chr17 2329165 - Exonic hg38 BRCA TCGA-A7-A0DC-01A 17 0 Out-of-frame Inter-chr p13.3 83184 ChimerSeq TCGA FAWG TCGA_RNA-Seq U1-27P U1 chr1 145465732 - 27P chr14 34546762 + Exonic hg38 BRCA TCGA-A7-A0DC-01A 9 29 Out-of-frame Inter-chr 83185 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNC13D-SRP68 UNC13D chr17 75832966 - SRP68 chr17 76039342 - Exonic hg38 BRCA TCGA-A7-A13D-01A 23 277 CDS-3'UTR Intra-chr q25.1 q25.1 Seq+ 83186 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTF2-RPL5 MTF2 chr1 93115618 + RPL5 chr1 92840551 + Exonic hg38 BRCA TCGA-A7-A13D-01A 14 61 Out-of-frame Intra-chr p22.1 Transcription factor p22.1 Tumor suppressor gene Seq+ 83187 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARN-RRN3 PARN chr16 14617590 - RRN3 chr16 15084705 - Exonic hg38 BRCA TCGA-A7-A13D-01A 18 28 5'UTR-3'UTR Intra-chr p13.11 Seq+ 83188 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARIH2-DHX30 ARIH2 chr3 48973816 + DHX30 chr3 47845700 + Exonic hg38 BRCA TCGA-A7-A13D-01A 13 45 In-Frame Intra-chr p21.31 p21.31 Seq+ 83189 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPP3-PACS1 DPP3 chr11 66497477 + PACS1 chr11 66230548 + Exonic hg38 BRCA TCGA-A7-A13D-01A 10 25 In-Frame Intra-chr q13.2 q13.1 Seq+ 83190 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM6B-TMEM95 KDM6B chr17 7852108 + TMEM95 chr17 7356185 + Exonic hg38 BRCA TCGA-A7-A13D-01A 3 52 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 83191 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBX1-DISC1 PBX1 chr1 164563311 + DISC1 chr1 231958828 + Exonic hg38 BRCA TCGA-A7-A13D-01A 4 24 In-Frame Intra-chr q23.3 Oncogene Transcription factor q42.2 Seq+ 83192 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF3-AP3D1 TCF3 chr19 1621838 - AP3D1 chr19 2111828 - Exonic hg38 BRCA TCGA-A7-A13D-01A 5 19 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p13.3 Seq+ 83193 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1A-DHDDS ARID1A chr1 26732792 + DHDDS chr1 26438168 + Exonic hg38 BRCA TCGA-A7-A13D-01A 4 19 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 Seq+ 83194 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF4-GATA5 TAF4 chr20 62064451 - GATA5 chr20 62465921 - Exonic hg38 BRCA TCGA-A7-A13D-01A 5 11 5'UTR-CDS Intra-chr q13.33 Tumor suppressor gene Transcription factor Seq+ 83195 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK24-ATF7 STK24 chr13 98576745 - ATF7 chr12 53601021 - Exonic hg38 BRCA TCGA-A7-A13D-01A 6 3 CDS-5'UTR Inter-chr q32.2 q13.13 Transcription factor Seq+ 83196 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP36-CEP295NL USP36 chr17 78838587 - CEP295NL chr17 78873919 - Exonic hg38 BRCA TCGA-A7-A13D-01A 3 15 5'UTR-3'UTR Intra-chr q25.3 q25.3 83197 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCB9-EIF2B1 ABCB9 chr12 122944391 - EIF2B1 chr12 123622761 - Exonic hg38 BRCA TCGA-A7-A13D-01A 3 14 In-Frame Intra-chr q24.31 q24.31 Seq+ 83198 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM219A-PAX5 FAM219A chr9 34458204 - PAX5 chr9 36923484 - Exonic hg38 BRCA TCGA-A7-A13D-01A 4 5 In-Frame Intra-chr p13.3 p13.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 83199 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESPNP-NECAP2 ESPNP chr1 16696779 - NECAP2 chr1 16455818 + Exonic hg38 BRCA TCGA-A7-A13D-01A 2 12 3'UTR-CDS Intra-chr p36.13 p36.13 Seq+ 83200 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEBL-FBXO11 NEBL chr10 20880794 - FBXO11 chr2 47839769 - Exonic hg38 BRCA TCGA-A7-A13D-01A 3 6 Out-of-frame Inter-chr p12.31 p16.3 Seq+ 83201 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHO2-ZNF609 PLEKHO2 chr15 64848742 + ZNF609 chr15 64622827 + Exonic hg38 BRCA TCGA-A7-A13D-01A 3 4 In-Frame Intra-chr q22.31 q22.31 Transcription factor Seq+ 83202 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAG5-FAM222B SPAG5 chr17 28591698 - FAM222B chr17 28766707 - Exonic hg38 BRCA TCGA-A7-A13D-01A 3 4 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 83203 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACROD1-TRPT1 MACROD1 chr11 64151239 - TRPT1 chr11 64224341 - Exonic hg38 BRCA TCGA-A7-A13D-01A 2 7 In-Frame Intra-chr q13.1 q13.1 Seq+ 83204 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEBL-SKIDA1 NEBL chr10 21172383 - SKIDA1 chr10 21523871 - Exonic hg38 BRCA TCGA-A7-A13D-01A 1 11 CDS-5'UTR Intra-chr p12.31 p12.31 Seq+ 83205 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB5C-FAM134C RAB5C chr17 42154893 - FAM134C chr17 42585262 - Exonic hg38 BRCA TCGA-A7-A13D-01A 2 6 Out-of-frame Intra-chr q21.2 Seq+ 83206 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIRT7-CCDC57 SIRT7 chr17 81914294 - CCDC57 chr17 82101866 - Exonic hg38 BRCA TCGA-A7-A13D-01A 1 10 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 83207 ChimerSeq TCGA FAWG TCGA_RNA-Seq METAP2-VEZT METAP2 chr12 95474330 + VEZT chr12 95270051 + Exonic hg38 BRCA TCGA-A7-A13D-01A 2 3 Out-of-frame Intra-chr q22 q22 Tumor suppressor gene Seq+ 83208 ChimerSeq TCGA FAWG TCGA_RNA-Seq MND1-ARFIP1 MND1 chr4 153358622 + ARFIP1 chr4 152863606 + Exonic hg38 BRCA TCGA-A7-A13D-01A 1 7 In-Frame Intra-chr q31.3 q31.3 Seq+ 83209 ChimerSeq TCGA FAWG TCGA_RNA-Seq GANAB-ZNF76 GANAB chr11 62632565 - ZNF76 chr6 35281056 + Exonic hg38 BRCA TCGA-A7-A13D-01A 2 2 CDS-5'UTR Inter-chr q12.3 Tumor suppressor gene p21.31 Transcription factor Seq+ 83210 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPBL-CLSPN NIPBL chr5 36877178 + CLSPN chr1 35765326 - Exonic hg38 BRCA TCGA-A7-A13D-01A 2 1 5'UTR-CDS Inter-chr p13.2 p34.3 Seq+ 83211 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASCC1-MICU1 ASCC1 chr10 72196811 - MICU1 chr10 72375872 - Exonic hg38 BRCA TCGA-A7-A13D-01A 1 3 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 83212 ChimerSeq TCGA FAWG TCGA_RNA-Seq COMMD7-SUN5 COMMD7 chr20 32704023 - SUN5 chr20 32995727 - Exonic hg38 BRCA TCGA-A7-A13D-01A 1 2 Out-of-frame Intra-chr q11.21 q11.21 83213 ChimerSeq TCGA FAWG TCGA_RNA-Seq MELK-RGP1 MELK chr9 36597290 + RGP1 chr9 35749737 + Exonic hg38 BRCA TCGA-A7-A13D-01A 1 2 5'UTR-5'UTR Intra-chr p13.2 CAMK:CAMKL p13.3 Seq+ 83214 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A3-PLPP2 SLC39A3 chr19 2737048 - PLPP2 chr19 288171 - Exonic hg38 BRCA TCGA-A7-A13E-01A 25 138 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 83215 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXTL3-SARAF EXTL3 chr8 28622810 + SARAF chr8 30066918 - Exonic hg38 BRCA TCGA-A7-A13E-01A 34 72 5'UTR-CDS Intra-chr p21.1 Tumor suppressor gene p12 83216 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4B-C19orf44 KDM4B chr19 5016339 + C19orf44 chr19 16500792 + Exonic hg38 BRCA TCGA-A7-A13E-01A 11 41 5'UTR-5'UTR Intra-chr p13.3 p13.11 Seq+ 83217 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEIS3-CCDC94 MEIS3 chr19 47406460 - CCDC94 chr19 4251027 + Exonic hg38 BRCA TCGA-A7-A13E-01A 1 2 Out-of-frame Intra-chr q13.32 Transcription factor p13.3 83218 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNU2-6P RNU2 chr11 62841689 - 6P chr13 46374471 - Exonic hg38 BRCA TCGA-A7-A26F-01A 18 0 Out-of-frame Inter-chr 83219 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR74-6P WDR74 chr11 62841689 - 6P chr13 46374471 - Exonic hg38 BRCA TCGA-A7-A26F-01A 18 0 Out-of-frame Inter-chr q12.3 83220 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYFIP1-SNHG14 CYFIP1 chr15 22939192 - SNHG14 chr15 25418788 + Exonic hg38 BRCA TCGA-A7-A26F-01A 1 25 5'UTR-5'UTR Intra-chr q11.2 q11.2 83221 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC5-C14orf105 EXOC5 chr14 57217982 - C14orf105 chr14 57493742 - Exonic hg38 BRCA TCGA-A7-A26F-01A 4 1 Out-of-frame Intra-chr q22.3 q22.3 83222 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYFIP1-FAM189A1 CYFIP1 chr15 22872825 - FAM189A1 chr15 29381831 - Exonic hg38 BRCA TCGA-A7-A26F-01A 1 4 5'UTR-5'UTR Intra-chr q11.2 83223 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANSL1L-ACADL KANSL1L chr2 210104104 - ACADL chr2 210220802 - Exonic hg38 BRCA TCGA-A7-A26F-01A 1 3 Out-of-frame Intra-chr q34 q34 83224 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF6-MPZL1 DCAF6 chr1 168004793 + MPZL1 chr1 167765583 + Exonic hg38 BRCA TCGA-A7-A26G-01A 53 142 In-Frame Intra-chr q24.2 q24.2 KB Seq+ 83225 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBCD-SLC9A3R1 TBCD chr17 82889697 + SLC9A3R1 chr17 74762012 + Exonic hg38 BRCA TCGA-A7-A26G-01A 34 152 5'UTR-CDS Intra-chr q25.1 Tumor suppressor gene Seq+ 83226 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCM2-PPIA CCM2 chr7 45038426 + PPIA chr7 44799247 + Exonic hg38 BRCA TCGA-A7-A26G-01A 28 43 In-Frame Intra-chr p13 p13 Seq+ 83227 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF13-TM4SF4 RNF13 chr3 149813353 + TM4SF4 chr3 149498722 + Exonic hg38 BRCA TCGA-A7-A26G-01A 7 42 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 83228 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH1L-ARHGEF2 ASH1L chr1 155438327 - ARHGEF2 chr1 155983200 - Exonic hg38 BRCA TCGA-A7-A26G-01A 7 33 CDS-5'UTR Intra-chr q22 Transcription factor q22 Seq+ 83229 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABI2-CYP20A1 ABI2 chr2 203328631 + CYP20A1 chr2 203289765 + Exonic hg38 BRCA TCGA-A7-A26G-01A 4 38 Out-of-frame Intra-chr q33.2 Tumor suppressor gene q33.2 Seq+ 83230 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAD3-DIS3L SMAD3 chr15 67066360 + DIS3L chr15 66311724 + Exonic hg38 BRCA TCGA-A7-A26G-01A 8 17 Out-of-frame Intra-chr q22.33 Transcription factor q22.31 Seq+ 83231 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIFR-C9 LIFR chr5 38493606 - C9 chr5 39316029 - Exonic hg38 BRCA TCGA-A7-A26G-01A 7 12 Out-of-frame Intra-chr p13.1 Oncogene Tumor suppressor gene p13.1 Seq+ 83232 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTF2-BRDT MTF2 chr1 93079531 + BRDT chr1 92004414 + Exonic hg38 BRCA TCGA-A7-A26G-01A 6 8 Out-of-frame Intra-chr p22.1 Transcription factor p22.1 Atypical:BRD Seq+ 83233 ChimerSeq TCGA FAWG TCGA_RNA-Seq ILKAP-PER2 ILKAP chr2 238182065 - PER2 chr2 238249212 - Exonic hg38 BRCA TCGA-A7-A26G-01A 5 7 In-Frame Intra-chr q37.3 q37.3 Tumor suppressor gene Seq+ 83234 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGCR2-CLTCL1 DGCR2 chr22 19089368 - CLTCL1 chr22 19275830 - Exonic hg38 BRCA TCGA-A7-A26G-01A 3 14 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 83235 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRBD1-CCDC88A SRBD1 chr2 45476993 - CCDC88A chr2 55418916 - Exonic hg38 BRCA TCGA-A7-A26G-01A 4 8 In-Frame Intra-chr p21 p16.1 Seq+ 83236 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBRM1-TKT PBRM1 chr3 52658199 - TKT chr3 53242242 - Exonic hg38 BRCA TCGA-A7-A26G-01A 4 7 Out-of-frame Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 Tumor suppressor gene Seq+ 83237 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3KBP1-MAP7D2 SH3KBP1 chrX 19836125 - MAP7D2 chrX 20008398 - Exonic hg38 BRCA TCGA-A7-A26G-01A 2 14 CDS-3'UTR Intra-chr p22.12 p22.12 Seq+ 83238 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53BP1-DMXL2 TP53BP1 chr15 43432194 - DMXL2 chr15 51517167 - Exonic hg38 BRCA TCGA-A7-A26G-01A 3 10 In-Frame Intra-chr q15.3 Tumor suppressor gene q21.2 Seq+ 83239 ChimerSeq TCGA FAWG TCGA_RNA-Seq ICMT-ACOT7 ICMT chr1 6234886 - ACOT7 chr1 6318578 - Exonic hg38 BRCA TCGA-A7-A26G-01A 2 9 Out-of-frame Intra-chr p36.31 p36.31 Seq+ 83240 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCU-CDH23 MCU chr10 72692301 + CDH23 chr10 71675112 + Exonic hg38 BRCA TCGA-A7-A26G-01A 3 5 In-Frame Intra-chr q22.1 q22.1 Seq+ 83241 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANK3-RHOBTB1 ANK3 chr10 60733263 - RHOBTB1 chr10 60911552 - Exonic hg38 BRCA TCGA-A7-A26G-01A 2 4 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 83242 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF653-ELOF1 ZNF653 chr19 11495950 - ELOF1 chr19 11554365 - Exonic hg38 BRCA TCGA-A7-A26G-01A 2 4 Out-of-frame Intra-chr p13.2 Transcription factor p13.2 Seq+ 83243 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAN2B1-RTBDN MAN2B1 chr19 12661260 - RTBDN chr19 12828767 - Exonic hg38 BRCA TCGA-A7-A26G-01A 1 7 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 83244 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF121-ANO1 RNF121 chr11 71960891 + ANO1 chr11 70087752 + Exonic hg38 BRCA TCGA-A7-A26G-01A 2 2 In-Frame Intra-chr q13.4 q13.3 Seq+ 83245 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX34-PPP5C DHX34 chr19 47358120 + PPP5C chr19 46353748 + Exonic hg38 BRCA TCGA-A7-A26G-01A 2 1 Out-of-frame Intra-chr q13.32 q13.32 Seq+ 83246 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM35-CCDC25 TRIM35 chr8 27310801 - CCDC25 chr8 27752587 - Exonic hg38 BRCA TCGA-A7-A26G-01A 1 3 In-Frame Intra-chr p21.2 Tumor suppressor gene p21.1 83247 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUFY3-ENAM RUFY3 chr4 70705294 + ENAM chr4 70662129 + Exonic hg38 BRCA TCGA-A7-A26G-01A 1000 1000 CDS-3'UTR Intra-chr q13.3 q13.3 83248 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELSR2-KCNC4 CELSR2 chr1 109273670 + KCNC4 chr1 110222964 + Exonic hg38 BRCA TCGA-A7-A26H-01A 2 3 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 83249 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNU1-16P RNU1 chr6 36639575 - 16P chr13 113478980 - Exonic hg38 BRCA TCGA-A7-A26I-01A 3 424 Out-of-frame Inter-chr 83250 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNU1-U1 RNU1 chr15 82174275 - U1 chr1 146376824 + Exonic hg38 BRCA TCGA-A7-A26I-01A 49 0 Out-of-frame Inter-chr 83251 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLPTM1-CYP2A7 CLPTM1 chr19 44985303 + CYP2A7 chr19 40880628 - Exonic hg38 BRCA TCGA-A7-A26I-01A 22 43 Out-of-frame Intra-chr q13.32 q13.2 Seq+ 83252 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPRS-DNAH14 EPRS chr1 219987142 - DNAH14 chr1 225318583 + Exonic hg38 BRCA TCGA-A7-A26I-01A 19 34 Out-of-frame Intra-chr q41 q42.12 Seq+ 83253 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2O-PRPSAP1 UBE2O chr17 76452725 - PRPSAP1 chr17 76313891 - Exonic hg38 BRCA TCGA-A7-A26I-01A 2 2 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 83254 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCGB1D2-ALDH3B1 SCGB1D2 chr11 62242362 + ALDH3B1 chr11 68018527 + Exonic hg38 BRCA TCGA-A7-A26J-01A 15 67 Out-of-frame Intra-chr q12.3 q13.2 Seq+ 83255 ChimerSeq TCGA FAWG TCGA_RNA-Seq THRAP3-EPHB2 THRAP3 chr1 36259484 + EPHB2 chr1 22781421 + Exonic hg38 BRCA TCGA-A7-A26J-01A 10 46 5'UTR-CDS Intra-chr p34.3 p36.12 Tumor suppressor gene Seq+ 83256 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRSF4-SCRN3 SRSF4 chr1 29181646 - SCRN3 chr2 174399922 + Exonic hg38 BRCA TCGA-A7-A26J-01A 4 5 Out-of-frame Inter-chr p35.3 q31.1 Seq+ 83257 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCMH1-AGO3 SCMH1 chr1 41160875 - AGO3 chr1 36027114 + Exonic hg38 BRCA TCGA-A7-A26J-01A 2 9 Out-of-frame Intra-chr p34.2 Transcription factor p34.3 Seq+ 83258 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSE1-METTL23 GSE1 chr16 85613398 + METTL23 chr17 76732978 + Exonic hg38 BRCA TCGA-A7-A2KD-01A 61 592 Out-of-frame Inter-chr q24.1 q25.1 Seq+ 83259 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT9-JMJD6 SEPT9 chr17 77281554 + JMJD6 chr17 76725855 - Exonic hg38 BRCA TCGA-A7-A2KD-01A 58 127 Out-of-frame Intra-chr q25.1 Seq+ 83260 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF136-RNASEH2A ZNF136 chr19 12163206 + RNASEH2A chr19 12804104 + Exonic hg38 BRCA TCGA-A7-A2KD-01A 34 205 5'UTR-5'UTR Intra-chr p13.2 Transcription factor p13.13 Seq+ 83261 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERCC6-PREX1 ERCC6 chr10 49528417 - PREX1 chr20 48708421 - Exonic hg38 BRCA TCGA-A7-A2KD-01A 10 34 Out-of-frame Inter-chr q11.23 q13.13 Seq+ 83262 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALT1-FAM201A B4GALT1 chr9 33135189 - FAM201A chr9 38621832 + Exonic hg38 BRCA TCGA-A7-A2KD-01A 3 61 CDS-5'UTR Intra-chr p21.1 p13.1 Seq+ 83263 ChimerSeq TCGA FAWG TCGA_RNA-Seq STX8-HSD17B4 STX8 chr17 9491829 - HSD17B4 chr5 119456315 + Exonic hg38 BRCA TCGA-A7-A2KD-01A 6 31 In-Frame Inter-chr p13.1 q23.1 Seq+ 83264 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSPA14-MRPS35 HSPA14 chr10 14840157 + MRPS35 chr12 27735447 + Exonic hg38 BRCA TCGA-A7-A2KD-01A 5 21 Out-of-frame Inter-chr p13 p11.22 Seq+ 83265 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSF-AS3 NSF chr17 46674613 + AS3 chr17 48600447 + Exonic hg38 BRCA TCGA-A7-A2KD-01A 4 19 Out-of-frame Intra-chr Tumor suppressor gene 83266 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0100-TEX14 KIAA0100 chr17 28638252 - TEX14 chr17 58615345 - Exonic hg38 BRCA TCGA-A7-A2KD-01A 4 16 Out-of-frame Intra-chr q11.2 q22 Seq+ 83267 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFI44L-SLC44A3 IFI44L chr1 78620571 + SLC44A3 chr1 94857335 + Exonic hg38 BRCA TCGA-A7-A2KD-01A 3 19 5'UTR-5'UTR Intra-chr p31.1 p21.3 Seq+ 83268 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADNP2-L3MBTL4 ADNP2 chr18 80109472 + L3MBTL4 chr18 6215835 - Exonic hg38 BRCA TCGA-A7-A2KD-01A 5 6 5'UTR-CDS Intra-chr q23 Transcription factor p11.31 Tumor suppressor gene Transcription factor Seq+ 83269 ChimerSeq TCGA FAWG TCGA_RNA-Seq RECQL5-SEC14L1 RECQL5 chr17 75651186 - SEC14L1 chr17 77190803 + Exonic hg38 BRCA TCGA-A7-A2KD-01A 1 15 Out-of-frame Intra-chr q25.1 q25.2 Seq+ 83270 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEX14-TMEM98 TEX14 chr17 58615232 - TMEM98 chr17 32936332 + Exonic hg38 BRCA TCGA-A7-A2KD-01A 2 6 Out-of-frame Intra-chr q22 q11.2 Seq+ 83271 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBLD-DNAJC12 PBLD chr10 68306761 - DNAJC12 chr10 67823392 - Exonic hg38 BRCA TCGA-A7-A2KD-01A 1 9 In-Frame Intra-chr q21.3 q21.3 83272 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGFG1-FBXL14 AGFG1 chr2 227536993 + FBXL14 chr12 1587536 - Exonic hg38 BRCA TCGA-A7-A2KD-01A 1 7 Out-of-frame Inter-chr q36.3 p13.33 83273 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM98-GRM5 TMEM98 chr17 32936447 + GRM5 chr11 88567992 - Exonic hg38 BRCA TCGA-A7-A2KD-01A 1 5 Out-of-frame Inter-chr q11.2 q14.3 83274 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASSF8-RAD52 RASSF8 chr12 25995130 + RAD52 chr12 927263 - Exonic hg38 BRCA TCGA-A7-A2KD-01A 1 4 5'UTR-CDS Intra-chr p12.1 Tumor suppressor gene p13.33 83275 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD7-ASPH CHD7 chr8 60781430 + ASPH chr8 61503509 - Exonic hg38 BRCA TCGA-A7-A2KD-01A 1 1 In-Frame Intra-chr q12.2 q12.3 Seq+ 83276 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD18A-B4GALT1 ANKRD18A chr9 38571358 - B4GALT1 chr9 33167173 - Exonic hg38 BRCA TCGA-A7-A2KD-01A 1000 1000 Out-of-frame Intra-chr p13.1 p21.1 83277 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBX3-BIK TBX3 chr12 114682812 - BIK chr22 43124016 + Exonic hg38 BRCA TCGA-A7-A3IZ-01A 4 11 CDS-5'UTR Inter-chr q24.21 Transcription factor q13.2 Tumor suppressor gene Seq+ 83278 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNTA-OVOL1 FNTA chr8 43056546 + OVOL1 chr11 65794031 + Exonic hg38 BRCA TCGA-A7-A3IZ-01A 3 4 Out-of-frame Inter-chr p11.21 q13.1 Transcription factor Seq+ 83279 ChimerSeq TCGA FAWG TCGA_RNA-Seq COG5-DNAH7 COG5 chr7 107324440 - DNAH7 chr2 195787171 - Exonic hg38 BRCA TCGA-A7-A3IZ-01A 2 7 5'UTR-CDS Inter-chr q32.3 Seq+ 83280 ChimerSeq TCGA FAWG TCGA_RNA-Seq IMPG1-NSD3 IMPG1 chr6 75930953 - NSD3 chr8 38318940 - Exonic hg38 BRCA TCGA-A7-A3IZ-01A 1 2 Out-of-frame Inter-chr q14.1 p11.23 Tumor suppressor gene 83281 ChimerSeq TCGA FAWG TCGA_RNA-Seq MVP-KIF22 MVP chr16 29840459 + KIF22 chr16 29803449 + Exonic hg38 BRCA TCGA-A7-A3J0-01A 17 41 In-Frame Intra-chr p11.2 p11.2 Seq+ 83282 ChimerSeq TCGA FAWG TCGA_RNA-Seq SARS-KIAA1324 SARS chr1 109224048 + KIAA1324 chr1 109161894 + Exonic hg38 BRCA TCGA-A7-A3J0-01A 4 15 In-Frame Intra-chr p13.3 p13.3 Seq+ 83283 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPP2-PPY MPP2 chr17 43898262 - PPY chr17 43941654 - Exonic hg38 BRCA TCGA-A7-A3J0-01A 3 7 In-Frame Intra-chr q21.31 q21.31 Seq+ 83284 ChimerSeq TCGA FAWG TCGA_RNA-Seq CP-SOX5 CP chr3 149221647 - SOX5 chr12 23846193 - Exonic hg38 BRCA TCGA-A7-A3J0-01A 3 4 Out-of-frame Inter-chr q25.1 p12.1 Transcription factor Seq+ 83285 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEM1-ADCY2 SEM1 chr7 96709688 - ADCY2 chr5 7772932 + Exonic hg38 BRCA TCGA-A7-A3J0-01A 1 3 Out-of-frame Inter-chr q21.3 p15.31 83286 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND4B-RAB13 DENND4B chr1 153940904 - RAB13 chr1 153984781 - Exonic hg38 BRCA TCGA-A7-A3J0-01A 1 2 Out-of-frame Intra-chr q21.3 q21.3 83287 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH2B3-CUX2 SH2B3 chr12 111406277 + CUX2 chr12 111320012 + Exonic hg38 BRCA TCGA-A7-A3J0-01A 1 2 5'UTR-CDS Intra-chr q24.12 Tumor suppressor gene q24.11 Transcription factor Seq+ 83288 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACKR3-CASC4 ACKR3 chr2 236567841 + CASC4 chr15 44379690 + Exonic hg38 BRCA TCGA-A7-A3J0-01A 1 1 5'UTR-5'UTR Inter-chr q37.3 q15.3 83289 ChimerSeq TCGA FAWG TCGA_RNA-Seq EYA3-SUSD6 EYA3 chr1 28038839 - SUSD6 chr14 69658513 + Exonic hg38 BRCA TCGA-A7-A3J0-01A 1 1 CDS-5'UTR Inter-chr p35.3 q24.1 83290 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUNX2-IFT88 RUNX2 chr6 45492114 + IFT88 chr13 20691054 + Exonic hg38 BRCA TCGA-A7-A3J0-01A 1 1 In-Frame Inter-chr p21.1 Tumor suppressor gene Transcription factor q12.11 Tumor suppressor gene Seq+ 83291 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABHD4-PSMB11 ABHD4 chr14 22609910 + PSMB11 chr14 23042346 + Exonic hg38 BRCA TCGA-A7-A3J1-01A 3 6 Out-of-frame Intra-chr q11.2 q11.2 83292 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC16-PFKL ZDHHC16 chr10 97446353 + PFKL chr21 44312105 + Exonic hg38 BRCA TCGA-A7-A3RF-01A 7 128 5'UTR-CDS Inter-chr q24.1 q22.3 Seq+ 83293 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOSC1-CCDC144A EXOSC1 chr10 97445732 - CCDC144A chr17 16771977 + Exonic hg38 BRCA TCGA-A7-A3RF-01A 3 24 In-Frame Inter-chr q24.1 p11.2 Seq+ 83294 ChimerSeq TCGA FAWG TCGA_RNA-Seq C16orf87-ATXN2 C16orf87 chr16 46831084 - ATXN2 chr12 111453845 - Exonic hg38 BRCA TCGA-A7-A425-01A 1 8 In-Frame Inter-chr q11.2 q24.12 Seq+ 83295 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSRC2-VPS37B RSRC2 chr12 122521385 - VPS37B chr12 122871061 - Exonic hg38 BRCA TCGA-A7-A426-01A 2 1 In-Frame Intra-chr q24.31 q24.31 Seq+ 83296 ChimerSeq TCGA FAWG TCGA_RNA-Seq EDARADD-TGFBR3 EDARADD chr1 236409274 + TGFBR3 chr1 91797471 - Exonic hg38 BRCA TCGA-A7-A4SA-01A 3 3 Out-of-frame Intra-chr q42.3 p22.1 Tumor suppressor gene Seq+ 83297 ChimerSeq TCGA FAWG TCGA_RNA-Seq TGFBR3-EDARADD TGFBR3 chr1 91861471 - EDARADD chr1 236409216 + Exonic hg38 BRCA TCGA-A7-A4SA-01A 2 5 In-Frame Intra-chr p22.1 Tumor suppressor gene q42.3 Seq+ 83298 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK2-FAM168A MARK2 chr11 63839560 + FAM168A chr11 73468492 - Exonic hg38 BRCA TCGA-A7-A4SB-01A 9 49 CDS-5'UTR Intra-chr q13.1 CAMK:CAMKL q13.4 Seq+ 83299 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXDC2-ST8SIA6 PLXDC2 chr10 20068239 + ST8SIA6 chr10 17390620 - Exonic hg38 BRCA TCGA-A7-A4SB-01A 2 10 Out-of-frame Intra-chr p12.31 p12.33 Seq+ 83300 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPME1-TENM4 PPME1 chr11 74204445 + TENM4 chr11 78672329 - Exonic hg38 BRCA TCGA-A7-A4SB-01A 2 9 In-Frame Intra-chr q13.4 q14.1 Seq+ 83301 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2CD3-TENM4 C2CD3 chr11 74028287 - TENM4 chr11 78672329 - Exonic hg38 BRCA TCGA-A7-A4SB-01A 1000 1000 In-Frame Intra-chr q13.4 q14.1 83302 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM9SF2-CLYBL TM9SF2 chr13 99549222 + CLYBL chr13 99772824 + Exonic hg38 BRCA TCGA-A7-A4SC-01A 3 27 In-Frame Intra-chr q32.3 q32.3 Seq+ 83303 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHPT1-SCYL2 CHPT1 chr12 101730636 + SCYL2 chr12 100291503 + Exonic hg38 BRCA TCGA-A7-A4SC-01A 1 17 3'UTR-CDS Intra-chr q23.2 q23.1 Other:SCY1 83304 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCCA-NALCN PCCA chr13 100235878 + NALCN chr13 101399165 - Exonic hg38 BRCA TCGA-A7-A4SC-01A 1 4 5'UTR-5'UTR Intra-chr q32.3 q33.1 83305 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS16-ETV6 ADAMTS16 chr5 5209246 + ETV6 chr12 11752450 + Exonic hg38 BRCA TCGA-A7-A4SD-01A 3 73 In-Frame Inter-chr p15.32 p13.2 Tumor suppressor gene Transcription factor Seq+ 83306 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITPR2-ANO2 ITPR2 chr12 26427913 - ANO2 chr12 5832603 - Exonic hg38 BRCA TCGA-A7-A4SD-01A 10 31 In-Frame Intra-chr p11.23 p13.31 Seq+ 83307 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD9-ADAMTS12 CD9 chr12 6225534 + ADAMTS12 chr5 33684055 - Exonic hg38 BRCA TCGA-A7-A4SD-01A 3 31 In-Frame Inter-chr p13.31 p13.2 Seq+ 83308 ChimerSeq TCGA FAWG TCGA_RNA-Seq HFE-SMIM25 HFE chr6 26087516 + SMIM25 chr20 50275646 + Exonic hg38 BRCA TCGA-A7-A4SD-01A 1 39 CDS-5'UTR Inter-chr p22.2 q13.13 83309 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP51A1-BAIAP2L1 CYP51A1 chr7 92123120 - BAIAP2L1 chr7 98362432 - Exonic hg38 BRCA TCGA-A7-A4SD-01A 2 22 In-Frame Intra-chr q21.2 q22.1 Seq+ 83310 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRD1-BAIAP2L1 LRRD1 chr7 92123120 - BAIAP2L1 chr7 98362432 - Exonic hg38 BRCA TCGA-A7-A4SD-01A 2 22 3'UTR-CDS Intra-chr q21.2 q22.1 83311 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC4A8-ZFP36L1 SLC4A8 chr12 51462456 + ZFP36L1 chr14 68789668 - Exonic hg38 BRCA TCGA-A7-A4SD-01A 3 15 In-Frame Inter-chr q13.13 q24.1 Seq+ 83312 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARNTL2-DDX11L16 ARNTL2 chr12 27370230 + DDX11L16 chrX 156027444 - Exonic hg38 BRCA TCGA-A7-A4SD-01A 2 12 CDS-5'UTR Inter-chr p11.23 Transcription factor q28 83313 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTLL4-CNOT9 TTLL4 chr2 218711037 + CNOT9 chr2 218580561 + Exonic hg38 BRCA TCGA-A7-A4SD-01A 3 7 5'UTR-5'UTR Intra-chr q35 q35 83314 ChimerSeq TCGA FAWG TCGA_RNA-Seq GUSBP1-STK38L GUSBP1 chr5 21341976 + STK38L chr12 27297710 + Exonic hg38 BRCA TCGA-A7-A4SD-01A 1 13 3'UTR-5'UTR Inter-chr p14.3 p11.23 83315 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNMT3A-ADCY3 DNMT3A chr2 25300139 - ADCY3 chr2 24842384 - Exonic hg38 BRCA TCGA-A7-A4SD-01A 3 4 In-Frame Intra-chr p23.3 Oncogene Tumor suppressor gene p23.3 Seq+ 83316 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPP40-LYRM4 RPP40 chr6 5003880 - LYRM4 chr6 5109491 - Exonic hg38 BRCA TCGA-A7-A4SD-01A 1 11 In-Frame Intra-chr p25.1 p25.1 Seq+ 83317 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARNTL2-ITPR2 ARNTL2 chr12 27390239 + ITPR2 chr12 26443650 - Exonic hg38 BRCA TCGA-A7-A4SD-01A 1 8 Out-of-frame Intra-chr p11.23 Transcription factor p11.23 Seq+ 83318 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC4A8-BRF1 SLC4A8 chr12 51462456 + BRF1 chr14 68789668 - Exonic hg38 BRCA TCGA-A7-A4SD-01A 1000 1000 CDS-3'UTR Inter-chr q13.13 q32.33 Tumor suppressor gene 83319 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKMYT1-CLDN6 PKMYT1 chr16 2979648 - CLDN6 chr16 3018484 - Exonic hg38 BRCA TCGA-A7-A4SE-01A 11 76 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 83320 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARMC1-PEX19 ARMC1 chr8 65613244 - PEX19 chr1 160279845 - Exonic hg38 BRCA TCGA-A7-A4SE-01A 12 52 In-Frame Inter-chr q13.1 q23.2 Seq+ 83321 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC8-SS18 TRAPPC8 chr18 31907460 - SS18 chr18 26057742 - Exonic hg38 BRCA TCGA-A7-A4SE-01A 4 30 In-Frame Intra-chr q12.1 q11.2 Seq+ 83322 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAREM1-GTF2H1 GAREM1 chr18 32287031 - GTF2H1 chr11 18358525 + Exonic hg38 BRCA TCGA-A7-A4SE-01A 1 3 Out-of-frame Inter-chr q12.1 p15.1 83323 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIP4K2B-MED24 PIP4K2B chr17 38777687 - MED24 chr17 40032090 - Exonic hg38 BRCA TCGA-A7-A4SF-01A 24 195 5'UTR-CDS Intra-chr q12 q21.1 Seq+ 83324 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT2-SLC45A4 CNOT2 chr12 70319364 + SLC45A4 chr8 141221765 - Exonic hg38 BRCA TCGA-A7-A4SF-01A 10 72 In-Frame Inter-chr q15 q24.3 Seq+ 83325 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R13B-CCDC88C PPP1R13B chr14 103753000 - CCDC88C chr14 91279306 - Exonic hg38 BRCA TCGA-A7-A4SF-01A 4 14 Out-of-frame Intra-chr q32.33 q32.12 Seq+ 83326 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL9-IVL BCL9 chr1 147541674 + IVL chr1 152909779 + Exonic hg38 BRCA TCGA-A7-A4SF-01A 3 8 5'UTR-5'UTR Intra-chr q21.2 Oncogene q21.3 Seq+ 83327 ChimerSeq TCGA FAWG TCGA_RNA-Seq VMP1-YPEL2 VMP1 chr17 59735473 + YPEL2 chr17 59388327 + Exonic hg38 BRCA TCGA-A7-A4SF-01A 1 8 In-Frame Intra-chr q23.1 q22 83328 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-VMP1 BCAS3 chr17 60808076 + VMP1 chr17 59808796 + Exonic hg38 BRCA TCGA-A7-A4SF-01A 1 4 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 83329 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-RNFT1 BCAS3 chr17 60689761 + RNFT1 chr17 59963284 - Exonic hg38 BRCA TCGA-A7-A4SF-01A 1 3 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 83330 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL9-SMCP BCL9 chr1 147541674 + SMCP chr1 152884403 + Exonic hg38 BRCA TCGA-A7-A4SF-01A 1 2 5'UTR-5'UTR Intra-chr q21.2 Oncogene q21.3 Seq+ 83331 ChimerSeq TCGA FAWG TCGA_RNA-Seq PNPLA6-ECSIT PNPLA6 chr19 7534239 + ECSIT chr19 11508048 - Exonic hg38 BRCA TCGA-A7-A56D-01A 8 45 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 83332 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDFIP1-NDUFAF2 NDFIP1 chr5 142144676 + NDUFAF2 chr5 61152704 + Exonic hg38 BRCA TCGA-A7-A56D-01A 5 39 3'UTR-CDS Intra-chr q31.3 q12.1 Seq+ 83333 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCM2-PDHA1 CCM2 chr7 45000363 + PDHA1 chrX 19357652 + Exonic hg38 BRCA TCGA-A7-A56D-01A 4 15 In-Frame Inter-chr p13 p22.12 Seq+ 83334 ChimerSeq TCGA FAWG TCGA_RNA-Seq GDPD1-SMG8 GDPD1 chr17 59220751 + SMG8 chr17 59214805 + Exonic hg38 BRCA TCGA-A7-A56D-01A 5 8 Out-of-frame Intra-chr q22 q22 Seq+ 83335 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM45A-CMSS1 TMEM45A chr3 100519608 + CMSS1 chr3 100160430 + Exonic hg38 BRCA TCGA-A7-A5ZV-01A 17 209 In-Frame Intra-chr q12.2 q12.1 Seq+ 83336 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYSM1-ALG14 MYSM1 chr1 58699985 - ALG14 chr1 94983306 - Exonic hg38 BRCA TCGA-A7-A5ZV-01A 20 130 Out-of-frame Intra-chr p32.1 Transcription factor p21.3 Seq+ 83337 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF487-FXYD4 ZNF487 chr10 43436935 + FXYD4 chr10 43372727 + Exonic hg38 BRCA TCGA-A7-A5ZV-01A 6 41 5'UTR-5'UTR Intra-chr q11.21 Transcription factor q11.21 83338 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBB6-ROBO1 TUBB6 chr18 12311053 + ROBO1 chr3 78636108 - Exonic hg38 BRCA TCGA-A7-A5ZV-01A 7 22 In-Frame Inter-chr p11.21 p12.3 Tumor suppressor gene Seq+ 83339 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHIP-PATJ PHIP chr6 78997414 - PATJ chr1 61805448 + Exonic hg38 BRCA TCGA-A7-A5ZV-01A 5 12 Out-of-frame Inter-chr q14.1 p31.3 83340 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERI3-CMPK1 ERI3 chr1 44354892 - CMPK1 chr1 47368469 + Exonic hg38 BRCA TCGA-A7-A5ZV-01A 1 13 In-Frame Intra-chr p34.1 p33 Oncogene 83341 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN31-OS9 TSPAN31 chr12 57746256 + OS9 chr12 57715760 + Exonic hg38 BRCA TCGA-A7-A5ZV-01A 1 12 In-Frame Intra-chr q14.1 q13.3 Seq+ 83342 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAST2-NASP MAST2 chr1 45882395 + NASP chr1 45591223 + Exonic hg38 BRCA TCGA-A7-A5ZV-01A 1 11 In-Frame Intra-chr p34.1 AGC:MAST p34.1 Seq+ 83343 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPBP1L1-UTP14A GPBP1L1 chr1 45685576 - UTP14A chrX 129907367 + Exonic hg38 BRCA TCGA-A7-A5ZV-01A 2 2 5'UTR-CDS Inter-chr p34.1 Transcription factor q26.1 Seq+ 83344 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAGLA-POLD3 DAGLA chr11 61680504 + POLD3 chr11 74629217 + Exonic hg38 BRCA TCGA-A7-A5ZV-01A 1 4 5'UTR-5'UTR Intra-chr q12.2 q13.4 83345 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRABD2B-PKN2 TRABD2B chr1 47994034 - PKN2 chr1 88740988 + Exonic hg38 BRCA TCGA-A7-A5ZV-01A 1 2 In-Frame Intra-chr p33 p22.2 AGC:PKN 83346 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNNA3-BORCS5 CTNNA3 chr10 66621692 - BORCS5 chr12 12465546 + Exonic hg38 BRCA TCGA-A7-A5ZX-01A 1 20 CDS-3'UTR Inter-chr q21.3 Tumor suppressor gene 83347 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM9SF3-SLIT1 TM9SF3 chr10 96586734 - SLIT1 chr10 97049118 - Exonic hg38 BRCA TCGA-A7-A6VV-01A 25 32 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 83348 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPBL-SLC30A9 NIPBL chr5 36877178 + SLC30A9 chr4 42062986 + Exonic hg38 BRCA TCGA-A7-A6VV-01A 12 72 5'UTR-CDS Inter-chr p13.2 p13 Seq+ 83349 ChimerSeq TCGA FAWG TCGA_RNA-Seq CIC-RPS19 CIC chr19 42268594 + RPS19 chr19 41869031 + Exonic hg38 BRCA TCGA-A7-A6VV-01A 8 38 5'UTR-CDS Intra-chr q13.2 Oncogene Tumor suppressor gene Transcription factor q13.2 Seq+ 83350 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABTB2-LMO2 ABTB2 chr11 34356701 - LMO2 chr11 33881887 - Exonic hg38 BRCA TCGA-A7-A6VV-01A 4 8 CDS-5'UTR Intra-chr p13 p13 Seq+ 83351 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALG6-UBE2U ALG6 chr1 63371059 + UBE2U chr1 64241652 + Exonic hg38 BRCA TCGA-A7-A6VV-01A 3 12 In-Frame Intra-chr p31.3 p31.3 Seq+ 83352 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSRP1-RASGEF1B CSRP1 chr1 201507070 - RASGEF1B chr4 81602922 - Exonic hg38 BRCA TCGA-A7-A6VV-01A 3 11 5'UTR-5'UTR Inter-chr q32.1 q21.22 83353 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNE2-RTN1 SYNE2 chr14 63967846 + RTN1 chr14 59746481 - Exonic hg38 BRCA TCGA-A7-A6VV-01A 4 4 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 83354 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARPC1A-ZNF789 ARPC1A chr7 99344515 + ZNF789 chr7 99500723 + Exonic hg38 BRCA TCGA-A7-A6VV-01A 1 15 CDS-3'UTR Intra-chr q22.1 q22.1 Transcription factor Seq+ 83355 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM4-ACTN3 RBM4 chr11 66638752 + ACTN3 chr11 66557133 + Exonic hg38 BRCA TCGA-A7-A6VV-01A 3 5 5'UTR-5'UTR Intra-chr q13.2 Tumor suppressor gene q13.2 Seq+ 83356 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHRF1-TSPAN4 PHRF1 chr11 576592 + TSPAN4 chr11 850288 + Exonic hg38 BRCA TCGA-A7-A6VV-01A 2 8 3'UTR-5'UTR Intra-chr p15.5 p15.5 Seq+ 83357 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRR5L-TRIM44 PRR5L chr11 36403378 + TRIM44 chr11 35725924 + Exonic hg38 BRCA TCGA-A7-A6VV-01A 1 9 Out-of-frame Intra-chr p13 p13 Seq+ 83358 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM141-TRAF2 TMEM141 chr9 136792358 + TRAF2 chr9 136898713 + Exonic hg38 BRCA TCGA-A7-A6VV-01A 1 4 CDS-5'UTR Intra-chr q34.3 q34.3 Tumor suppressor gene 83359 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP31-TIMMDC1 ARHGAP31 chr3 119383226 + TIMMDC1 chr3 119513641 + Exonic hg38 BRCA TCGA-A7-A6VV-01A 1 3 In-Frame Intra-chr q13.32 q13.33 83360 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOK-HSP90AA1 MOK chr14 102263546 - HSP90AA1 chr14 102102085 - Exonic hg38 BRCA TCGA-A7-A6VV-01A 1 3 Out-of-frame Intra-chr q32.31 CMGC:RCK q32.31 Oncogene 83361 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNJ2-GTF2H5 SYNJ2 chr6 158017290 + GTF2H5 chr6 158170470 + Exonic hg38 BRCA TCGA-A7-A6VW-01A 49 173 5'UTR-5'UTR Intra-chr q25.3 q25.3 Seq+ 83362 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM160A2-DTD1 FAM160A2 chr11 6218971 - DTD1 chr20 18744100 + Exonic hg38 BRCA TCGA-A7-A6VW-01A 1 7 Out-of-frame Inter-chr p15.4 p11.23 83363 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R12C-KISS1 PPP1R12C chr19 55098784 - KISS1 chr1 204190797 - Exonic hg38 BRCA TCGA-A7-A6VW-01A 1 3 Out-of-frame Inter-chr q13.42 q32.1 Tumor suppressor gene Seq+ 83364 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPIRE1-CUBN SPIRE1 chr18 12449245 - CUBN chr10 16836382 - Exonic hg38 BRCA TCGA-A7-A6VX-01A 3 6 3'UTR-3'UTR Inter-chr p11.21 p13 Seq+ 83365 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0907-PHC1 KIAA0907 chr1 155933633 - PHC1 chr12 8917630 + Exonic hg38 BRCA TCGA-A7-A6VX-01A 1 7 Out-of-frame Inter-chr q22 p13.31 Seq+ 83366 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBXN4-R3HDM1 UBXN4 chr2 135776351 + R3HDM1 chr2 135680173 + Exonic hg38 BRCA TCGA-A7-A6VY-01A 8 48 In-Frame Intra-chr q21.3 q21.3 Seq+ 83367 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP32-ARHGAP39 USP32 chr17 60345481 - ARHGAP39 chr8 144605695 - Exonic hg38 BRCA TCGA-A7-A6VY-01A 7 13 CDS-5'UTR Inter-chr q23.2 q24.3 Seq+ 83368 ChimerSeq TCGA FAWG TCGA_RNA-Seq NECAB3-ARHGAP40 NECAB3 chr20 33669375 - ARHGAP40 chr20 38623359 + Exonic hg38 BRCA TCGA-A7-A6VY-01A 1 9 Out-of-frame Intra-chr q11.22 q11.23 Seq+ 83369 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAP2-FBXO42 SMAP2 chr1 40374223 + FBXO42 chr1 16256759 - Exonic hg38 BRCA TCGA-A7-A6VY-01A 2 5 In-Frame Intra-chr p34.2 p36.13 Seq+ 83370 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPF19-RAB1B PRPF19 chr11 60891103 - RAB1B chr11 66276504 + Exonic hg38 BRCA TCGA-A8-A06N-01A 59 482 Out-of-frame Intra-chr q12.2 q13.2 Seq+ 83371 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDHAF2-RIN1 SDHAF2 chr11 61430182 + RIN1 chr11 66333658 - Exonic hg38 BRCA TCGA-A8-A06N-01A 24 129 Out-of-frame Intra-chr q12.2 q13.2 Seq+ 83372 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMPK1-SH2D1B CMPK1 chr1 47334116 + SH2D1B chr1 162402802 - Exonic hg38 BRCA TCGA-A8-A06N-01A 10 32 Out-of-frame Intra-chr p33 Oncogene q23.3 Seq+ 83373 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBP-GAL OSBP chr11 59608484 - GAL chr11 68690917 + Exonic hg38 BRCA TCGA-A8-A06N-01A 3 8 Out-of-frame Intra-chr q12.1 q13.2 Seq+ 83374 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM245-NAA35 TMEM245 chr9 109033307 - NAA35 chr9 85942155 + Exonic hg38 BRCA TCGA-A8-A06N-01A 1 4 CDS-5'UTR Intra-chr q31.3 q21.33 83375 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSC22D4-BCL2L15 TSC22D4 chr7 100474274 - BCL2L15 chr1 113881140 - Exonic hg38 BRCA TCGA-A8-A06N-01A 1 4 Out-of-frame Inter-chr q22.1 p13.2 83376 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM2-HS1BP3 PUM2 chr2 20318537 - HS1BP3 chr2 20645505 - Exonic hg38 BRCA TCGA-A8-A06O-01A 21 63 Out-of-frame Intra-chr p24.1 p24.1 Seq+ 83377 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUSD6-RAD51B SUSD6 chr14 69611828 + RAD51B chr14 68291884 + Exonic hg38 BRCA TCGA-A8-A06O-01A 4 17 5'UTR-CDS Intra-chr q24.1 q24.1 83378 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFITM10-DENND5A IFITM10 chr11 1747667 - DENND5A chr11 9193681 - Exonic hg38 BRCA TCGA-A8-A06O-01A 5 12 5'UTR-CDS Intra-chr p15.4 Seq+ 83379 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRIM2-MAD2L1BP PRIM2 chr6 57382168 + MAD2L1BP chr6 43640021 + Exonic hg38 BRCA TCGA-A8-A06O-01A 3 4 In-Frame Intra-chr p11.2 p21.1 Seq+ 83380 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-TMEM229B PPFIA1 chr11 70356254 + TMEM229B chr14 67487172 - Exonic hg38 BRCA TCGA-A8-A06O-01A 1 7 5'UTR-5'UTR Inter-chr q13.3 q24.1 83381 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL48-DTX4 MRPL48 chr11 73825796 + DTX4 chr11 59204676 + Exonic hg38 BRCA TCGA-A8-A06O-01A 1 2 In-Frame Intra-chr q13.4 q12.1 Seq+ 83382 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEDD4L-TLN2 NEDD4L chr18 58044708 + TLN2 chr15 62770964 + Exonic hg38 BRCA TCGA-A8-A06P-01A 5 11 In-Frame Inter-chr q21.31 Tumor suppressor gene q22.2 Seq+ 83383 ChimerSeq TCGA FAWG TCGA_RNA-Seq NR2C2-ASCC1 NR2C2 chr3 15013789 + ASCC1 chr10 72097450 - Exonic hg38 BRCA TCGA-A8-A06Q-01A 110 306 In-Frame Inter-chr p25.1 Tumor suppressor gene Transcription factor q22.1 Seq+ 83384 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPC-RCOR1 XPC chr3 14168257 - RCOR1 chr14 102710935 + Exonic hg38 BRCA TCGA-A8-A06Q-01A 24 84 In-Frame Inter-chr p25.1 Oncogene q32.31 Seq+ 83385 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM111A-246P FAM111A chr11 59152938 + 246P chr9 15544244 + Exonic hg38 BRCA TCGA-A8-A06Q-01A 16 48 Out-of-frame Inter-chr q12.1 83386 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCNX3-SNX32 PCNX3 chr11 65630604 + SNX32 chr11 65849478 + Exonic hg38 BRCA TCGA-A8-A06Q-01A 11 55 In-Frame Intra-chr q13.1 q13.1 83387 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD28-EYS ANKRD28 chr3 15814240 - EYS chr6 65495993 - Exonic hg38 BRCA TCGA-A8-A06Q-01A 3 30 CDS-5'UTR Inter-chr p25.1 q12 83388 ChimerSeq TCGA FAWG TCGA_RNA-Seq APOPT1-ATP9A APOPT1 chr14 103574170 + ATP9A chr20 51697482 - Exonic hg38 BRCA TCGA-A8-A06Q-01A 4 16 Out-of-frame Inter-chr q32.33 q13.2 Seq+ 83389 ChimerSeq TCGA FAWG TCGA_RNA-Seq FANCD2-CINP FANCD2 chr3 10046723 + CINP chr14 102355897 - Exonic hg38 BRCA TCGA-A8-A06Q-01A 5 10 Out-of-frame Inter-chr p25.3 Oncogene q32.31 Seq+ 83390 ChimerSeq TCGA FAWG TCGA_RNA-Seq GREB1L-CEP192 GREB1L chr18 21242393 + CEP192 chr18 13100305 + Exonic hg38 BRCA TCGA-A8-A06Q-01A 6 6 5'UTR-CDS Intra-chr q11.1 p11.21 Seq+ 83391 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKRN2-FOLH1 MKRN2 chr3 12557176 + FOLH1 chr11 49206172 - Exonic hg38 BRCA TCGA-A8-A06Q-01A 6 6 Out-of-frame Inter-chr p25.2 p11.12 Seq+ 83392 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSH2-KLHL28 SSH2 chr17 29929938 - KLHL28 chr14 44945928 - Exonic hg38 BRCA TCGA-A8-A06Q-01A 4 11 In-Frame Inter-chr q11.2 q21.2 Seq+ 83393 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMTC2-PPFIA2 TMTC2 chr12 83061831 + PPFIA2 chr12 81457866 - Exonic hg38 BRCA TCGA-A8-A06Q-01A 3 13 In-Frame Intra-chr q21.31 q21.31 Seq+ 83394 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS41-ELMO1 VPS41 chr7 38754702 - ELMO1 chr7 37013435 - Exonic hg38 BRCA TCGA-A8-A06Q-01A 4 3 Out-of-frame Intra-chr p14.1 p14.1 Seq+ 83395 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPA1-MGAT4C PPA1 chr10 70217812 - MGAT4C chr12 85989552 - Exonic hg38 BRCA TCGA-A8-A06Q-01A 2 10 In-Frame Inter-chr q22.1 Seq+ 83396 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS29-MAP3K3 RPS29 chr14 49585950 - MAP3K3 chr17 63646034 + Exonic hg38 BRCA TCGA-A8-A06Q-01A 1 6 In-Frame Inter-chr q21.3 q23.3 STE:STE11 83397 ChimerSeq TCGA FAWG TCGA_RNA-Seq C10orf11-NRG3 C10orf11 chr10 76324485 + NRG3 chr10 82951469 + Exonic hg38 BRCA TCGA-A8-A06Q-01A 1 3 Out-of-frame Intra-chr q23.1 83398 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUZ12-TAC4 SUZ12 chr17 31993333 + TAC4 chr17 49844157 - Exonic hg38 BRCA TCGA-A8-A06Q-01A 1 3 In-Frame Intra-chr q11.2 Tumor suppressor gene q21.33 83399 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAV1-MROH3P NAV1 chr1 201740076 + MROH3P chr1 200965031 + Exonic hg38 BRCA TCGA-A8-A06R-01A 4 14 CDS-5'UTR Intra-chr q32.1 q32.1 Seq+ 83400 ChimerSeq TCGA FAWG TCGA_RNA-Seq PATJ-CACHD1 PATJ chr1 61927829 + CACHD1 chr1 64647801 + Exonic hg38 BRCA TCGA-A8-A06R-01A 3 5 In-Frame Intra-chr p31.3 p31.3 83401 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCB3-BAD PLCB3 chr11 64260234 + BAD chr11 64271803 - Exonic hg38 BRCA TCGA-A8-A06R-01A 3 5 Out-of-frame Intra-chr q13.1 Tumor suppressor gene q13.1 Seq+ 83402 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KA2-FGFR1OP RPS6KA2 chr6 166858200 - FGFR1OP chr6 167010813 + Exonic hg38 BRCA TCGA-A8-A06R-01A 3 2 In-Frame Intra-chr q27 Oncogene Tumor suppressor gene q27 83403 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERC1-UTRN ERC1 chr12 1444750 + UTRN chr6 144730357 + Exonic hg38 BRCA TCGA-A8-A06R-01A 2 3 In-Frame Inter-chr q24.2 83404 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPN2-STK17A RPN2 chr20 37204901 + STK17A chr7 43595901 + Exonic hg38 BRCA TCGA-A8-A06R-01A 1 1 Out-of-frame Inter-chr q11.23 p13 83405 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASCC3-ATL1 ASCC3 chr6 100605568 - ATL1 chr14 50628031 + Exonic hg38 BRCA TCGA-A8-A06T-01A 2 15 Out-of-frame Inter-chr q16.3 q22.1 Seq+ 83406 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT6A-IKBKB KAT6A chr8 42048378 - IKBKB chr8 42288634 + Exonic hg38 BRCA TCGA-A8-A06T-01A 3 10 In-Frame Intra-chr p11.21 Oncogene p11.21 Oncogene Seq+ 83407 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOPBP1-NEK11 TOPBP1 chr3 133637876 - NEK11 chr3 131349557 + Exonic hg38 BRCA TCGA-A8-A06U-01A 52 81 Out-of-frame Intra-chr q22.1 q22.1 Other:NEK Seq+ 83408 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB20-CD96 ZBTB20 chr3 115100175 - CD96 chr3 111647543 + Exonic hg38 BRCA TCGA-A8-A06U-01A 16 111 5'UTR-5'UTR Intra-chr q13.31 Transcription factor q13.13 Seq+ 83409 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK3-FRG1CP MARK3 chr14 103428440 + FRG1CP chr20 28586403 - Exonic hg38 BRCA TCGA-A8-A06U-01A 26 46 CDS-3'UTR Inter-chr q32.32 CAMK:CAMKL q11.1 83410 ChimerSeq TCGA FAWG TCGA_RNA-Seq LINC-RCHY1 LINC chr7 131107720 - RCHY1 chr4 75509296 - Exonic hg38 BRCA TCGA-A8-A06U-01A 19 60 Out-of-frame Inter-chr q21.1 Tumor suppressor gene 83411 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2H1-HPS5 GTF2H1 chr11 18322740 + HPS5 chr11 18296984 - Exonic hg38 BRCA TCGA-A8-A06U-01A 10 43 5'UTR-CDS Intra-chr p15.1 p15.1 Seq+ 83412 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP6V1A-OPA1 ATP6V1A chr3 113747113 + OPA1 chr3 193631612 + Exonic hg38 BRCA TCGA-A8-A06U-01A 7 46 5'UTR-CDS Intra-chr q13.31 q29 Seq+ 83413 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT4-ENAM CNOT4 chr7 135509889 - ENAM chr4 70681499 + Exonic hg38 BRCA TCGA-A8-A06U-01A 1 57 5'UTR-3'UTR Inter-chr q33 q13.3 83414 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD2-HOMER2 CHD2 chr15 92953573 + HOMER2 chr15 82864259 - Exonic hg38 BRCA TCGA-A8-A06U-01A 7 31 5'UTR-CDS Intra-chr q26.1 q25.2 Tumor suppressor gene Seq+ 83415 ChimerSeq TCGA FAWG TCGA_RNA-Seq HPS5-SETD5 HPS5 chr11 18296798 - SETD5 chr3 9424467 + Exonic hg38 BRCA TCGA-A8-A06U-01A 9 10 CDS-5'UTR Inter-chr p15.1 p25.3 Seq+ 83416 ChimerSeq TCGA FAWG TCGA_RNA-Seq YWHAE-TUSC5 YWHAE chr17 1400047 - TUSC5 chr17 1295491 + Exonic hg38 BRCA TCGA-A8-A06U-01A 6 18 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 83417 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPP-ABHD17C LPP chr3 188225527 + ABHD17C chr15 80754151 + Exonic hg38 BRCA TCGA-A8-A06U-01A 5 19 5'UTR-CDS Inter-chr q27.3 Oncogene q25.1 Seq+ 83418 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUMA1-ADARB2 NUMA1 chr11 72023065 - ADARB2 chr10 1217119 - Exonic hg38 BRCA TCGA-A8-A06U-01A 5 17 Out-of-frame Inter-chr q13.4 Oncogene p15.3 Seq+ 83419 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSR3-TRPC1 SSR3 chr3 156554957 - TRPC1 chr3 142802169 + Exonic hg38 BRCA TCGA-A8-A06U-01A 3 18 Out-of-frame Intra-chr q25.31 q23 Seq+ 83420 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUL5-SHANK2 CUL5 chr11 108054955 + SHANK2 chr11 71119032 - Exonic hg38 BRCA TCGA-A8-A06U-01A 5 7 In-Frame Intra-chr q22.3 Tumor suppressor gene q13.4 Seq+ 83421 ChimerSeq TCGA FAWG TCGA_RNA-Seq PODXL-ZNF467 PODXL chr7 131503984 - ZNF467 chr7 149764678 - Exonic hg38 BRCA TCGA-A8-A06U-01A 4 6 3'UTR-CDS Intra-chr q32.3 q36.1 Transcription factor Seq+ 83422 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTCH2-RAG2 MTCH2 chr11 47630555 - RAG2 chr11 36594195 - Exonic hg38 BRCA TCGA-A8-A06U-01A 1 12 5'UTR-5'UTR Intra-chr p11.2 p12 83423 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP98-TMEM117 NUP98 chr11 3753316 - TMEM117 chr12 44376595 + Exonic hg38 BRCA TCGA-A8-A06U-01A 2 8 Out-of-frame Inter-chr p15.4 Oncogene Tumor suppressor gene q12 Seq+ 83424 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK3-BAG5 MARK3 chr14 103428440 + BAG5 chr14 103561192 - Exonic hg38 BRCA TCGA-A8-A06U-01A 1 6 Out-of-frame Intra-chr q32.32 CAMK:CAMKL q32.33 Seq+ 83425 ChimerSeq TCGA FAWG TCGA_RNA-Seq HPS5-ANO5 HPS5 chr11 18322133 - ANO5 chr11 22203804 + Exonic hg38 BRCA TCGA-A8-A06U-01A 1 4 5'UTR-CDS Intra-chr p15.1 p14.3 83426 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2C-RHEB KMT2C chr7 152185558 - RHEB chr7 151491014 - Exonic hg38 BRCA TCGA-A8-A06U-01A 1 3 Out-of-frame Intra-chr q36.1 Oncogene Tumor suppressor gene q36.1 Oncogene Seq+ 83427 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCMTD1-FBXO3 PCMTD1 chr8 51845661 - FBXO3 chr11 33742084 - Exonic hg38 BRCA TCGA-A8-A06U-01A 1 2 Out-of-frame Inter-chr q11.23 p13 83428 ChimerSeq TCGA FAWG TCGA_RNA-Seq OAS3-RPH3A OAS3 chr12 112966029 + RPH3A chr12 112887797 + Exonic hg38 BRCA TCGA-A8-A06X-01A 3 8 Out-of-frame Intra-chr q24.13 q24.13 Seq+ 83429 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUZ12P1-ACSF2 SUZ12P1 chr17 30759539 + ACSF2 chr17 50472428 + Exonic hg38 BRCA TCGA-A8-A06X-01A 1 9 5'UTR-CDS Intra-chr q11.2 q21.33 83430 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRLS1-SEL1L2 CRLS1 chr20 6009912 + SEL1L2 chr20 13919123 - Exonic hg38 BRCA TCGA-A8-A06X-01A 2 3 Out-of-frame Intra-chr p12.3 p12.1 Seq+ 83431 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0368-WNK2 KIAA0368 chr9 111484116 - WNK2 chr9 93229696 + Exonic hg38 BRCA TCGA-A8-A06Y-01A 1 2 Out-of-frame Intra-chr q31.3 q22.31 Tumor suppressor gene Seq+ 83432 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM135-CLMP TMEM135 chr11 87091395 + CLMP chr11 123084713 - Exonic hg38 BRCA TCGA-A8-A06Z-01A 11 34 In-Frame Intra-chr q14.2 q24.1 Seq+ 83433 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDPK2P-MAPK8IP3 PDPK2P chr16 2633739 - MAPK8IP3 chr16 1759958 + Exonic hg38 BRCA TCGA-A8-A06Z-01A 11 27 Out-of-frame Intra-chr p13.3 p13.3 83434 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP32-AHNAK ARHGAP32 chr11 129123446 - AHNAK chr11 62433891 - Exonic hg38 BRCA TCGA-A8-A06Z-01A 6 28 Out-of-frame Intra-chr q24.3 q12.3 Tumor suppressor gene Seq+ 83435 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC43A2-SMG6 SLC43A2 chr17 1613195 - SMG6 chr17 2283735 - Exonic hg38 BRCA TCGA-A8-A06Z-01A 7 23 5'UTR-CDS Intra-chr p13.3 Seq+ 83436 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHROOM3-JCHAIN SHROOM3 chr4 76586469 + JCHAIN chr4 70666514 - Exonic hg38 BRCA TCGA-A8-A06Z-01A 5 25 Out-of-frame Intra-chr q21.1 q13.3 83437 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP22-SPACA3 USP22 chr17 21042665 - SPACA3 chr17 32996843 + Exonic hg38 BRCA TCGA-A8-A06Z-01A 3 9 Out-of-frame Intra-chr p11.2 q11.2 Seq+ 83438 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM219-CPB1 TMEM219 chr16 29971778 + CPB1 chr3 148840702 + Exonic hg38 BRCA TCGA-A8-A06Z-01A 1000 1000 Out-of-frame Inter-chr p11.2 q24 83439 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC37B-SUZ12 LRRC37B chr17 32022825 + SUZ12 chr17 31998658 + Exonic hg38 BRCA TCGA-A8-A076-01A 10 17 In-Frame Intra-chr q11.2 q11.2 Tumor suppressor gene Seq+ 83440 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCBP2-EEA1 PCBP2 chr12 53479531 + EEA1 chr12 92864987 - Exonic hg38 BRCA TCGA-A8-A076-01A 5 20 3'UTR-CDS Intra-chr q13.13 q22 Transcription factor Seq+ 83441 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT7-AXIN2 KAT7 chr17 49792033 + AXIN2 chr17 65558736 - Exonic hg38 BRCA TCGA-A8-A076-01A 3 14 CDS-5'UTR Intra-chr q21.33 Transcription factor q24.1 Tumor suppressor gene Seq+ 83442 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED24-CEP112 MED24 chr17 40053298 - CEP112 chr17 65961598 - Exonic hg38 BRCA TCGA-A8-A076-01A 3 13 Out-of-frame Intra-chr q21.1 q24.1 Seq+ 83443 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC2-ANKFN1 TANC2 chr17 63389544 + ANKFN1 chr17 56440327 + Exonic hg38 BRCA TCGA-A8-A076-01A 5 4 Out-of-frame Intra-chr q23.2 q22 Seq+ 83444 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX42-B4GALNT2 DDX42 chr17 63811173 + B4GALNT2 chr17 49152800 + Exonic hg38 BRCA TCGA-A8-A076-01A 1 9 Out-of-frame Intra-chr q23.3 q21.32 83445 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL48-DTX4 MRPL48 chr11 73825796 + DTX4 chr11 59204676 + Exonic hg38 BRCA TCGA-A8-A076-01A 2 2 In-Frame Intra-chr q13.4 q12.1 Seq+ 83446 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L1-GHRH EPB41L1 chr20 36112480 + GHRH chr20 37256908 - Exonic hg38 BRCA TCGA-A8-A079-01A 65 509 5'UTR-5'UTR Intra-chr q11.23 q11.23 Seq+ 83447 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNE2-KIAA0391 SYNE2 chr14 63986617 + KIAA0391 chr14 35266727 + Exonic hg38 BRCA TCGA-A8-A079-01A 73 363 Out-of-frame Intra-chr q23.2 q13.2 Seq+ 83448 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF20-RPN2 PHF20 chr20 35941047 + RPN2 chr20 37184180 + Exonic hg38 BRCA TCGA-A8-A079-01A 28 92 In-Frame Intra-chr q11.22 Transcription factor q11.23 Seq+ 83449 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBTD1-MYO7A MBTD1 chr17 51217334 - MYO7A chr11 77192051 + Exonic hg38 BRCA TCGA-A8-A079-01A 28 47 In-Frame Inter-chr q21.33 q13.5 Seq+ 83450 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS4-EMSY INTS4 chr11 77901421 - EMSY chr11 76542216 + Exonic hg38 BRCA TCGA-A8-A079-01A 12 35 Out-of-frame Intra-chr q14.1 q13.5 83451 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT2-KIF26B GALNT2 chr1 230203290 + KIF26B chr1 245684233 + Exonic hg38 BRCA TCGA-A8-A079-01A 8 22 CDS-3'UTR Intra-chr q42.13 Seq+ 83452 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP4R3A-FBXO34 PPP4R3A chr14 91509506 - FBXO34 chr14 55350381 + Exonic hg38 BRCA TCGA-A8-A079-01A 7 21 CDS-5'UTR Intra-chr q32.12 q22.3 83453 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAP2-USP36 ADAP2 chr17 30926918 + USP36 chr17 78787658 - Exonic hg38 BRCA TCGA-A8-A079-01A 3 35 CDS-3'UTR Intra-chr q11.2 q25.3 83454 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIVEP2-SMOC2 HIVEP2 chr6 142945944 - SMOC2 chr6 168598818 + Exonic hg38 BRCA TCGA-A8-A079-01A 6 20 5'UTR-CDS Intra-chr q24.2 Transcription factor q27 83455 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPC4AP-PPFIA1 TRPC4AP chr20 35069296 - PPFIA1 chr11 70272173 + Exonic hg38 BRCA TCGA-A8-A079-01A 6 10 CDS-5'UTR Inter-chr q11.22 q13.3 Seq+ 83456 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM168A-TPCN2 FAM168A chr11 73406615 - TPCN2 chr11 69135435 + Exonic hg38 BRCA TCGA-A8-A079-01A 4 17 Out-of-frame Intra-chr q13.4 q13.3 83457 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPIDR-RGS20 SPIDR chr8 47294030 + RGS20 chr8 53954076 + Exonic hg38 BRCA TCGA-A8-A079-01A 4 6 In-Frame Intra-chr q11.21 q11.23 83458 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS4-SLCO2B1 INTS4 chr11 77901421 - SLCO2B1 chr11 75162655 + Exonic hg38 BRCA TCGA-A8-A079-01A 3 4 Out-of-frame Intra-chr q14.1 q13.4 Seq+ 83459 ChimerSeq TCGA FAWG TCGA_RNA-Seq PELI1-ACTG2 PELI1 chr2 64104701 - ACTG2 chr2 73901276 + Exonic hg38 BRCA TCGA-A8-A079-01A 3 3 CDS-5'UTR Intra-chr p14 p13.1 Seq+ 83460 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLCO2B1-CEP128 SLCO2B1 chr11 75165949 + CEP128 chr14 80900029 - Exonic hg38 BRCA TCGA-A8-A079-01A 2 3 Out-of-frame Inter-chr q13.4 q31.1 Seq+ 83461 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPD52-NECAB1 TPD52 chr8 80171425 - NECAB1 chr8 90801691 + Exonic hg38 BRCA TCGA-A8-A079-01A 2 1 Out-of-frame Intra-chr q21.13 q21.3 Seq+ 83462 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR3K-L3MBTL4 POLR3K chr16 51558 - L3MBTL4 chr18 6215835 - Exonic hg38 BRCA TCGA-A8-A079-01A 1 4 In-Frame Inter-chr p13.3 p11.31 Tumor suppressor gene Transcription factor 83463 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPATCH8-NPLOC4 GPATCH8 chr17 44435065 - NPLOC4 chr17 81629805 - Exonic hg38 BRCA TCGA-A8-A07B-01A 3 37 In-Frame Intra-chr q21.31 q25.3 Seq+ 83464 ChimerSeq TCGA FAWG TCGA_RNA-Seq XRRA1-FAM168A XRRA1 chr11 74933801 - FAM168A chr11 73430770 - Exonic hg38 BRCA TCGA-A8-A07B-01A 1 40 5'UTR-CDS Intra-chr q13.4 q13.4 Seq+ 83465 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBX1-SLC30A10 PBX1 chr1 164563311 + SLC30A10 chr1 219685732 - Exonic hg38 BRCA TCGA-A8-A07C-01A 16 130 CDS-3'UTR Intra-chr q23.3 Oncogene Transcription factor q41 83466 ChimerSeq TCGA FAWG TCGA_RNA-Seq PI4KB-SELENBP1 PI4KB chr1 151326172 - SELENBP1 chr1 151369769 - Exonic hg38 BRCA TCGA-A8-A07C-01A 7 72 Out-of-frame Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 83467 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2C-AUTS2 KMT2C chr7 152435626 - AUTS2 chr7 70435752 + Exonic hg38 BRCA TCGA-A8-A07C-01A 5 66 Out-of-frame Intra-chr q36.1 Oncogene Tumor suppressor gene q11.22 83468 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC6-CTIF ZDHHC6 chr10 112438336 - CTIF chr18 48817221 + Exonic hg38 BRCA TCGA-A8-A07C-01A 8 24 3'UTR-3'UTR Inter-chr q25.2 Seq+ 83469 ChimerSeq TCGA FAWG TCGA_RNA-Seq XRN1-PIP4K2A XRN1 chr3 142447870 - PIP4K2A chr10 22609717 - Exonic hg38 BRCA TCGA-A8-A07C-01A 4 28 In-Frame Inter-chr q23 p12.2 Seq+ 83470 ChimerSeq TCGA FAWG TCGA_RNA-Seq TACC2-ATE1 TACC2 chr10 122132734 + ATE1 chr10 121870038 - Exonic hg38 BRCA TCGA-A8-A07C-01A 4 27 Out-of-frame Intra-chr q26.13 q26.13 Seq+ 83471 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTDH-CALB1 MTDH chr8 97723035 + CALB1 chr8 90082102 - Exonic hg38 BRCA TCGA-A8-A07C-01A 6 18 In-Frame Intra-chr q22.1 q21.3 Seq+ 83472 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHBP1-GAREM2 EHBP1 chr2 62996766 + GAREM2 chr2 26176344 + Exonic hg38 BRCA TCGA-A8-A07C-01A 5 19 In-Frame Intra-chr p15 p23.3 83473 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R3A-TOPBP1 PPP2R3A chr3 136106322 + TOPBP1 chr3 133620347 - Exonic hg38 BRCA TCGA-A8-A07C-01A 4 22 Out-of-frame Intra-chr q22.2 q22.1 Seq+ 83474 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD5-SAMD12 SETD5 chr3 9475156 + SAMD12 chr8 118580893 - Exonic hg38 BRCA TCGA-A8-A07C-01A 4 21 Out-of-frame Inter-chr p25.3 q24.12 Seq+ 83475 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM182-SLC9A2 TMEM182 chr2 102764427 + SLC9A2 chr2 102657564 + Exonic hg38 BRCA TCGA-A8-A07C-01A 4 16 In-Frame Intra-chr q12.1 q12.1 Seq+ 83476 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFDN-HMGCLL1 AFDN chr6 167870498 + HMGCLL1 chr6 55542140 - Exonic hg38 BRCA TCGA-A8-A07C-01A 1 14 In-Frame Intra-chr q27 p12.1 83477 ChimerSeq TCGA FAWG TCGA_RNA-Seq BBOF1-PTGR2 BBOF1 chr14 74057258 + PTGR2 chr14 73879096 + Exonic hg38 BRCA TCGA-A8-A07C-01A 1 13 In-Frame Intra-chr q24.3 q24.3 83478 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGU-XRCC4 PIGU chr20 34616042 - XRCC4 chr5 83258530 + Exonic hg38 BRCA TCGA-A8-A07C-01A 1 13 Out-of-frame Inter-chr q11.22 q14.2 Seq+ 83479 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF385D-GLB1 ZNF385D chr3 21750895 - GLB1 chr3 33046232 - Exonic hg38 BRCA TCGA-A8-A07C-01A 3 5 In-Frame Intra-chr p24.3 Transcription factor p22.3 Seq+ 83480 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAH14-CNIH3 DNAH14 chr1 224955098 + CNIH3 chr1 224515741 + Exonic hg38 BRCA TCGA-A8-A07C-01A 2 7 CDS-5'UTR Intra-chr q42.12 q42.12 83481 ChimerSeq TCGA FAWG TCGA_RNA-Seq RYR2-GPR137B RYR2 chr1 237617486 + GPR137B chr1 236205126 + Exonic hg38 BRCA TCGA-A8-A07C-01A 2 6 5'UTR-CDS Intra-chr q43 q42.3 Seq+ 83482 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOK-ANKRD66 MOK chr14 102304962 - ANKRD66 chr6 46751937 + Exonic hg38 BRCA TCGA-A8-A07C-01A 1 7 Out-of-frame Inter-chr q32.31 CMGC:RCK p12.3 83483 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK5R1-PSMD11 CDK5R1 chr17 32488540 + PSMD11 chr17 32468999 + Exonic hg38 BRCA TCGA-A8-A07C-01A 1 5 Out-of-frame Intra-chr q11.2 q11.2 83484 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRMS1L-KIAA0391 BRMS1L chr14 35834923 + KIAA0391 chr14 35266727 + Exonic hg38 BRCA TCGA-A8-A07C-01A 1 3 Out-of-frame Intra-chr q13.2 q13.2 83485 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHCHD6-EPHB1 CHCHD6 chr3 126733222 + EPHB1 chr3 134925816 + Exonic hg38 BRCA TCGA-A8-A07C-01A 1 3 Out-of-frame Intra-chr q21.3 q22.2 Oncogene 83486 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD18-HNRNPF RAD18 chr3 8898894 - HNRNPF chr10 43387936 - Exonic hg38 BRCA TCGA-A8-A07C-01A 1 2 CDS-5'UTR Inter-chr p25.3 q11.21 83487 ChimerSeq TCGA FAWG TCGA_RNA-Seq CANT1-SEPT9 CANT1 chr17 79005372 - SEPT9 chr17 77488240 + Exonic hg38 BRCA TCGA-A8-A07E-01A 4 14 Out-of-frame Intra-chr q25.3 83488 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCHSD2-PLEKHB1 FCHSD2 chr11 73140031 - PLEKHB1 chr11 73660753 + Exonic hg38 BRCA TCGA-A8-A07E-01A 1 5 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 83489 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP11-ULBP2 LRP11 chr6 149826264 - ULBP2 chr6 149948723 + Exonic hg38 BRCA TCGA-A8-A07F-01A 2 16 CDS-3'UTR Intra-chr q25.1 q25.1 Seq+ 83490 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1XR1-USP13 TBL1XR1 chr3 177046129 - USP13 chr3 179761112 + Exonic hg38 BRCA TCGA-A8-A07G-01A 35 475 In-Frame Intra-chr q26.32 q26.33 Seq+ 83491 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPRD1A-SLC39A6 RPRD1A chr18 36067254 - SLC39A6 chr18 36127016 - Exonic hg38 BRCA TCGA-A8-A07G-01A 7 27 5'UTR-5'UTR Intra-chr q12.2 q12.2 Seq+ 83492 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE3A-CYP19A1 UBE3A chr15 25405461 - CYP19A1 chr15 51242950 - Exonic hg38 BRCA TCGA-A8-A07G-01A 7 16 5'UTR-5'UTR Intra-chr q11.2 q21.2 Seq+ 83493 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS11-MXRA8 INTS11 chr1 1320456 - MXRA8 chr1 1354232 - Exonic hg38 BRCA TCGA-A8-A07G-01A 6 16 Out-of-frame Intra-chr p36.33 p36.33 83494 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFAND3-THEGL ZFAND3 chr6 37929999 + THEGL chr4 56548790 + Exonic hg38 BRCA TCGA-A8-A07G-01A 2 8 In-Frame Inter-chr p21.2 q12 Seq+ 83495 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCD-GPR19 SCD chr10 100348346 + GPR19 chr12 12662470 - Exonic hg38 BRCA TCGA-A8-A07I-01A 26 122 CDS-5'UTR Inter-chr q24.31 p13.1 Seq+ 83496 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPOP-XYLT2 SPOP chr17 49677933 - XYLT2 chr17 50353630 + Exonic hg38 BRCA TCGA-A8-A07I-01A 7 35 5'UTR-5'UTR Intra-chr q21.33 Oncogene Tumor suppressor gene q21.33 Seq+ 83497 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACSF2-SPAG9 ACSF2 chr17 50426389 + SPAG9 chr17 51014353 - Exonic hg38 BRCA TCGA-A8-A07I-01A 6 29 In-Frame Intra-chr q21.33 q21.33 Seq+ 83498 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK8-IKZF3 CDK8 chr13 26254769 + IKZF3 chr17 39832151 - Exonic hg38 BRCA TCGA-A8-A07I-01A 7 22 Out-of-frame Inter-chr q12.13 CMGC:CDK Oncogene q21.1 Tumor suppressor gene Transcription factor Seq+ 83499 ChimerSeq TCGA FAWG TCGA_RNA-Seq LASP1-ARHGAP23 LASP1 chr17 38870258 + ARHGAP23 chr17 38458102 + Exonic hg38 BRCA TCGA-A8-A07I-01A 1 41 CDS-3'UTR Intra-chr q12 q12 Seq+ 83500 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH1L-AIM2 ASH1L chr1 155562153 - AIM2 chr1 159068701 - Exonic hg38 BRCA TCGA-A8-A07I-01A 1 26 5'UTR-5'UTR Intra-chr q22 Transcription factor q23.2 Tumor suppressor gene Seq+ 83501 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP1-ANKFN1 AKAP1 chr17 57085398 + ANKFN1 chr17 56350766 + Exonic hg38 BRCA TCGA-A8-A07I-01A 6 4 5'UTR-5'UTR Intra-chr q22 q22 Seq+ 83502 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCK2-DPP6 ADCK2 chr7 140690813 + DPP6 chr7 154637821 + Exonic hg38 BRCA TCGA-A8-A07I-01A 2 13 In-Frame Intra-chr q34 Atypical:ABC1 Seq+ 83503 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPN8-HHAT CAPN8 chr1 223553832 - HHAT chr1 210674288 + Exonic hg38 BRCA TCGA-A8-A07I-01A 2 11 CDS-3'UTR Intra-chr q41 83504 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFB2-DPP6 NDUFB2 chr7 140690813 + DPP6 chr7 154637821 + Exonic hg38 BRCA TCGA-A8-A07I-01A 2 8 5'UTR-5'UTR Intra-chr q34 83505 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOCS7-SRCIN1 SOCS7 chr17 38377842 + SRCIN1 chr17 38549210 - Exonic hg38 BRCA TCGA-A8-A07I-01A 1 11 3'UTR-5'UTR Intra-chr q12 q12 Seq+ 83506 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTPBP2-HIST1H2BJ GTPBP2 chr6 43622003 - HIST1H2BJ chr6 27126462 - Exonic hg38 BRCA TCGA-A8-A07J-01A 2 8 CDS-3'UTR Intra-chr p21.1 p22.1 Seq+ 83507 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP8-VMP1 AKAP8 chr19 15358967 - VMP1 chr17 59764971 + Exonic hg38 BRCA TCGA-A8-A07L-01A 14 90 In-Frame Inter-chr p13.12 Transcription factor q23.1 Seq+ 83508 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCM10-OPTN MCM10 chr10 13183100 + OPTN chr10 13112453 + Exonic hg38 BRCA TCGA-A8-A07L-01A 12 75 In-Frame Intra-chr p13 p13 Seq+ 83509 ChimerSeq TCGA FAWG TCGA_RNA-Seq GDAP2-SPAG17 GDAP2 chr1 117929448 - SPAG17 chr1 117996743 - Exonic hg38 BRCA TCGA-A8-A07L-01A 6 55 5'UTR-CDS Intra-chr p12 p12 Seq+ 83510 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A17-ST13 SLC25A17 chr22 40819195 - ST13 chr22 40844909 - Exonic hg38 BRCA TCGA-A8-A07L-01A 2 57 Out-of-frame Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 83511 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAST3-ARRDC2 MAST3 chr19 18110741 + ARRDC2 chr19 18012913 + Exonic hg38 BRCA TCGA-A8-A07L-01A 6 25 Out-of-frame Intra-chr p13.11 AGC:MAST p13.11 83512 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRBA-CASP12 LRBA chr4 150683551 - CASP12 chr11 104897468 - Exonic hg38 BRCA TCGA-A8-A07L-01A 2 27 Out-of-frame Inter-chr q31.3 q22.3 Seq+ 83513 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRERF1-MRPL14 TRERF1 chr6 42451177 - MRPL14 chr6 44116629 - Exonic hg38 BRCA TCGA-A8-A07L-01A 2 24 5'UTR-5'UTR Intra-chr p21.1 Transcription factor p21.1 Seq+ 83514 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNE2-MIPOL1 SYNE2 chr14 63853143 + MIPOL1 chr14 37422855 + Exonic hg38 BRCA TCGA-A8-A07L-01A 5 7 5'UTR-CDS Intra-chr q23.2 q13.3 Seq+ 83515 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELOA-IFT140 ELOA chr1 23754460 + IFT140 chr16 1558134 - Exonic hg38 BRCA TCGA-A8-A07O-01A 66 93 In-Frame Inter-chr p36.11 p13.3 83516 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO9A-TMEM59 MYO9A chr15 71916370 - TMEM59 chr1 54043525 - Exonic hg38 BRCA TCGA-A8-A07O-01A 31 128 In-Frame Inter-chr q23 p32.3 Seq+ 83517 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSR2-ACOT11 SSR2 chr1 156018132 - ACOT11 chr1 54607942 + Exonic hg38 BRCA TCGA-A8-A07O-01A 16 65 Out-of-frame Intra-chr q22 p32.3 Seq+ 83518 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTR-IFI16 MTR chr1 236838599 + IFI16 chr1 159049432 + Exonic hg38 BRCA TCGA-A8-A07O-01A 14 56 In-Frame Intra-chr q43 Oncogene q23.1 Tumor suppressor gene Seq+ 83519 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR2A-SLC16A13 POLR2A chr17 7496073 + SLC16A13 chr17 7038152 + Exonic hg38 BRCA TCGA-A8-A07O-01A 15 39 3'UTR-CDS Intra-chr p13.1 p13.1 Seq+ 83520 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCYL2-FAM71C SCYL2 chr12 100283147 + FAM71C chr12 99649288 + Exonic hg38 BRCA TCGA-A8-A07O-01A 10 20 In-Frame Intra-chr q23.1 Other:SCY1 q23.1 Seq+ 83521 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIMK2-RUFY1 LIMK2 chr22 31225819 + RUFY1 chr5 179580947 + Exonic hg38 BRCA TCGA-A8-A07O-01A 5 14 CDS-3'UTR Inter-chr q12.2 TKL:LISK Seq+ 83522 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB1A-SPRED2 RAB1A chr2 65129893 - SPRED2 chr2 65316883 - Exonic hg38 BRCA TCGA-A8-A07O-01A 7 5 Out-of-frame Intra-chr p14 p14 Seq+ 83523 ChimerSeq TCGA FAWG TCGA_RNA-Seq URI1-POP4 URI1 chr19 29942664 + POP4 chr19 29606196 + Exonic hg38 BRCA TCGA-A8-A07O-01A 3 11 5'UTR-5'UTR Intra-chr q12 q12 83524 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASCC1-MICU1 ASCC1 chr10 72133057 - MICU1 chr10 72375872 - Exonic hg38 BRCA TCGA-A8-A07O-01A 1 7 In-Frame Intra-chr q22.1 q22.1 Seq+ 83525 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR59-CHST6 WDR59 chr16 74903947 - CHST6 chr16 75490769 - Exonic hg38 BRCA TCGA-A8-A07O-01A 1 5 CDS-3'UTR Intra-chr q23.1 q23.1 83526 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCMTD1-WRN PCMTD1 chr8 51898930 - WRN chr8 31141430 + Exonic hg38 BRCA TCGA-A8-A07P-01A 11 51 Out-of-frame Intra-chr q11.23 p12 Oncogene Seq+ 83527 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL48-DTX4 MRPL48 chr11 73825796 + DTX4 chr11 59204676 + Exonic hg38 BRCA TCGA-A8-A07P-01A 1 5 In-Frame Intra-chr q13.4 q12.1 Seq+ 83528 ChimerSeq TCGA FAWG TCGA_RNA-Seq VKORC1L1-GUSB VKORC1L1 chr7 65873565 + GUSB chr7 65970366 - Exonic hg38 BRCA TCGA-A8-A07R-01A 26 62 In-Frame Intra-chr q11.21 q11.21 Seq+ 83529 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXDC2-SYNE1 PLXDC2 chr10 20001986 + SYNE1 chr6 152472413 - Exonic hg38 BRCA TCGA-A8-A07R-01A 11 14 In-Frame Inter-chr p12.31 q25.2 Oncogene Seq+ 83530 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSH2-ASAP1 SSH2 chr17 29929938 - ASAP1 chr8 130401970 - Exonic hg38 BRCA TCGA-A8-A07R-01A 1 29 CDS-5'UTR Inter-chr q11.2 q24.22 83531 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAK-MAGI1 GAK chr4 911673 - MAGI1 chr3 65622088 - Exonic hg38 BRCA TCGA-A8-A07R-01A 3 15 In-Frame Inter-chr p16.3 Other:NAK Oncogene Seq+ 83532 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADIPOR2-ERC1 ADIPOR2 chr12 1691191 + ERC1 chr12 1263034 + Exonic hg38 BRCA TCGA-A8-A07R-01A 3 11 3'UTR-CDS Intra-chr p13.33 Seq+ 83533 ChimerSeq TCGA FAWG TCGA_RNA-Seq BLOC1S3-C12orf4 BLOC1S3 chr19 45178831 + C12orf4 chr12 4505380 - Exonic hg38 BRCA TCGA-A8-A07R-01A 1 2 5'UTR-CDS Inter-chr q13.32 p13.32 83534 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUCO-DNM3 SUCO chr1 172591071 + DNM3 chr1 172379018 + Exonic hg38 BRCA TCGA-A8-A07U-01A 16 54 In-Frame Intra-chr q24.3 q24.3 Seq+ 83535 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF865-AXL ZNF865 chr19 55605732 + AXL chr19 41242883 + Exonic hg38 BRCA TCGA-A8-A07U-01A 16 21 5'UTR-CDS Intra-chr q13.42 Transcription factor q13.2 TK:Axl Oncogene 83536 ChimerSeq TCGA FAWG TCGA_RNA-Seq MFSD1-GFM1 MFSD1 chr3 158827337 + GFM1 chr3 158681995 + Exonic hg38 BRCA TCGA-A8-A07U-01A 6 19 In-Frame Intra-chr q25.32 q25.32 Seq+ 83537 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPTC7-ALS2CR12 PPTC7 chr12 110582809 - ALS2CR12 chr2 201330522 - Exonic hg38 BRCA TCGA-A8-A07U-01A 3 23 Out-of-frame Inter-chr q24.11 q33.1 Seq+ 83538 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCUBE3-ANKS1A SCUBE3 chr6 35228739 + ANKS1A chr6 35082691 + Exonic hg38 BRCA TCGA-A8-A07U-01A 2 13 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 83539 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R3C-NFKBIA PPP2R3C chr14 35087951 - NFKBIA chr14 35402060 - Exonic hg38 BRCA TCGA-A8-A07U-01A 2 4 In-Frame Intra-chr q13.2 q13.2 Seq+ 83540 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-CPT1A SHANK2 chr11 71224697 - CPT1A chr11 68815487 - Exonic hg38 BRCA TCGA-A8-A07W-01A 28 57 5'UTR-5'UTR Intra-chr q13.4 q13.3 Seq+ 83541 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPF19-DDB1 PRPF19 chr11 60900582 - DDB1 chr11 61324137 - Exonic hg38 BRCA TCGA-A8-A07W-01A 21 75 In-Frame Intra-chr q12.2 q12.2 Seq+ 83542 ChimerSeq TCGA FAWG TCGA_RNA-Seq RABEP1-RORB RABEP1 chr17 5346925 + RORB chr9 74630282 + Exonic hg38 BRCA TCGA-A8-A07W-01A 11 14 In-Frame Inter-chr p13.2 q21.13 Transcription factor Seq+ 83543 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3GL1-TAX1BP1 SH3GL1 chr19 4400324 - TAX1BP1 chr7 27827738 + Exonic hg38 BRCA TCGA-A8-A07W-01A 4 32 In-Frame Inter-chr p13.3 p15.2 Seq+ 83544 ChimerSeq TCGA FAWG TCGA_RNA-Seq STIM1-FITM2 STIM1 chr11 4082351 + FITM2 chr20 44307240 - Exonic hg38 BRCA TCGA-A8-A07W-01A 1 31 Out-of-frame Inter-chr p15.4 q13.12 Seq+ 83545 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA5-ST8SIA1 PLEKHA5 chr12 19132450 + ST8SIA1 chr12 22287293 - Exonic hg38 BRCA TCGA-A8-A07W-01A 4 14 In-Frame Intra-chr p12.3 p12.1 Seq+ 83546 ChimerSeq TCGA FAWG TCGA_RNA-Seq EAF1-BTD EAF1 chr3 15427882 + BTD chr3 15635424 + Exonic hg38 BRCA TCGA-A8-A07W-01A 2 12 Out-of-frame Intra-chr p25.1 Tumor suppressor gene p25.1 Seq+ 83547 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF16B-HIPK3 KIF16B chr20 16507958 - HIPK3 chr11 33347293 + Exonic hg38 BRCA TCGA-A8-A07W-01A 2 4 Out-of-frame Inter-chr p12.1 p13 CMGC:DYRK Seq+ 83548 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLEU1-DPH6 DLEU1 chr13 50083194 + DPH6 chr15 35410896 - Exonic hg38 BRCA TCGA-A8-A07W-01A 1 4 5'UTR-CDS Inter-chr q14.2 Tumor suppressor gene q14 83549 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC1-DCLRE1C DNAJC1 chr10 21882282 - DCLRE1C chr10 14899312 - Exonic hg38 BRCA TCGA-A8-A081-01A 91 364 In-Frame Intra-chr p12.31 p13 Seq+ 83550 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC2-ZNF689 TANC2 chr17 63415674 + ZNF689 chr16 30623869 - Exonic hg38 BRCA TCGA-A8-A081-01A 4 17 CDS-5'UTR Inter-chr q23.2 p11.2 Transcription factor 83551 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERLIN2-ADRB3 ERLIN2 chr8 37753710 + ADRB3 chr8 37966222 - Exonic hg38 BRCA TCGA-A8-A081-01A 3 20 Out-of-frame Intra-chr p11.23 p11.23 Seq+ 83552 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-NRXN2 SHANK2 chr11 71252425 - NRXN2 chr11 64697792 - Exonic hg38 BRCA TCGA-A8-A081-01A 2 17 5'UTR-CDS Intra-chr q13.4 q13.1 83553 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM2A-CCDC170 KDM2A chr11 67121358 + CCDC170 chr6 151615443 + Exonic hg38 BRCA TCGA-A8-A081-01A 2 5 In-Frame Inter-chr q13.2 Transcription factor q25.1 Seq+ 83554 ChimerSeq TCGA FAWG TCGA_RNA-Seq PC-DCDC2 PC chr11 66863774 - DCDC2 chr6 24205102 - Exonic hg38 BRCA TCGA-A8-A081-01A 1 4 Out-of-frame Inter-chr q13.2 p22.3 Tumor suppressor gene Seq+ 83555 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAND1-WDR38 CAND1 chr12 67311762 + WDR38 chr9 124857738 + Exonic hg38 BRCA TCGA-A8-A083-01A 3 1 Out-of-frame Inter-chr q14.3 q33.3 83556 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGKD-SP140 DGKD chr2 233354674 + SP140 chr2 230237083 + Exonic hg38 BRCA TCGA-A8-A084-01A 5 12 Out-of-frame Intra-chr q37.1 Transcription factor Seq+ 83557 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD11-CES5A ANKRD11 chr16 89418284 - CES5A chr16 55949902 - Exonic hg38 BRCA TCGA-A8-A084-01A 2 19 5'UTR-5'UTR Intra-chr q24.3 q12.2 Seq+ 83558 ChimerSeq TCGA FAWG TCGA_RNA-Seq BOK-COPS9 BOK chr2 241562476 + COPS9 chr2 240126940 - Exonic hg38 BRCA TCGA-A8-A084-01A 2 12 Out-of-frame Intra-chr q37.3 q37.3 83559 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNED1-HJURP SNED1 chr2 240999050 + HJURP chr2 233844283 - Exonic hg38 BRCA TCGA-A8-A084-01A 3 4 In-Frame Intra-chr q37.3 q37.1 Seq+ 83560 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL4A5-RGAG1 COL4A5 chrX 108440206 + RGAG1 chrX 110445153 + Exonic hg38 BRCA TCGA-A8-A085-01A 39 565 Out-of-frame Intra-chr q22.3 Seq+ 83561 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUMA1-PTH NUMA1 chr11 72080458 - PTH chr11 13496173 - Exonic hg38 BRCA TCGA-A8-A086-01A 7 32 5'UTR-5'UTR Intra-chr q13.4 Oncogene p15.3 Seq+ 83562 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS4-PPFIA1 INTS4 chr11 77978996 - PPFIA1 chr11 70372215 + Exonic hg38 BRCA TCGA-A8-A086-01A 3 19 In-Frame Intra-chr q14.1 q13.3 Seq+ 83563 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNEP1R1-ANK1 CNEP1R1 chr16 50026467 + ANK1 chr8 41758137 - Exonic hg38 BRCA TCGA-A8-A086-01A 4 7 Out-of-frame Inter-chr q12.1 p11.21 Seq+ 83564 ChimerSeq TCGA FAWG TCGA_RNA-Seq YAP1-STIM1 YAP1 chr11 102209564 + STIM1 chr11 4023873 + Exonic hg38 BRCA TCGA-A8-A086-01A 2 12 In-Frame Intra-chr q22.1 Tumor suppressor gene p15.4 Seq+ 83565 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL48-DTX4 MRPL48 chr11 73825796 + DTX4 chr11 59204676 + Exonic hg38 BRCA TCGA-A8-A086-01A 3 4 In-Frame Intra-chr q13.4 q12.1 Seq+ 83566 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHB1-NUMA1 PLEKHB1 chr11 73651890 + NUMA1 chr11 72024353 - Exonic hg38 BRCA TCGA-A8-A086-01A 2 3 In-Frame Intra-chr q13.4 q13.4 Oncogene Seq+ 83567 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPT1A-GDPD4 CPT1A chr11 68804000 - GDPD4 chr11 77287420 - Exonic hg38 BRCA TCGA-A8-A086-01A 1 6 CDS-5'UTR Intra-chr q13.3 q13.5 Seq+ 83568 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG13-TSPAN18 ATG13 chr11 46618375 + TSPAN18 chr11 44860328 + Exonic hg38 BRCA TCGA-A8-A086-01A 1 1 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 83569 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARA-PGAP3 RARA chr17 40318448 + PGAP3 chr17 39686019 - Exonic hg38 BRCA TCGA-A8-A08B-01A 3 20 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q12 Oncogene Seq+ 83570 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSMCE2-SNTB1 NSMCE2 chr8 125151277 + SNTB1 chr8 120575225 - Exonic hg38 BRCA TCGA-A8-A08B-01A 1 12 In-Frame Intra-chr q24.13 q24.12 Seq+ 83571 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNB1-RPL19 CACNB1 chr17 39184784 - RPL19 chr17 39202317 + Exonic hg38 BRCA TCGA-A8-A08B-01A 1 6 Out-of-frame Intra-chr q12 q12 83572 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT2-NUP107 CNOT2 chr12 70243480 + NUP107 chr12 68696819 + Exonic hg38 BRCA TCGA-A8-A08F-01A 163 32 5'UTR-CDS Intra-chr q15 q15 Seq+ 83573 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP8-RAD51C LRP8 chr1 53255117 - RAD51C chr17 58694931 + Exonic hg38 BRCA TCGA-A8-A08F-01A 12 48 In-Frame Inter-chr p32.3 q22 Tumor suppressor gene Seq+ 83574 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF6L-GLYATL1 TAF6L chr11 62771490 + GLYATL1 chr11 58954770 + Exonic hg38 BRCA TCGA-A8-A08F-01A 3 18 5'UTR-CDS Intra-chr q12.3 q12.1 Seq+ 83575 ChimerSeq TCGA FAWG TCGA_RNA-Seq RDH13-RUSC1 RDH13 chr19 55056653 - RUSC1 chr1 155328150 + Exonic hg38 BRCA TCGA-A8-A08F-01A 3 7 5'UTR-5'UTR Inter-chr q22 Seq+ 83576 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R12A-NDUFAF2 PPP1R12A chr12 79832332 - NDUFAF2 chr5 61073125 + Exonic hg38 BRCA TCGA-A8-A08F-01A 3 6 Out-of-frame Inter-chr q21.31 q12.1 Seq+ 83577 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIN7A-TRHDE LIN7A chr12 80937641 - TRHDE chr12 72286681 + Exonic hg38 BRCA TCGA-A8-A08F-01A 2 7 Out-of-frame Intra-chr q21.31 q21.1 Seq+ 83578 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTBP2-IL1RAPL1 CTBP2 chr10 125160319 - IL1RAPL1 chrX 29917464 + Exonic hg38 BRCA TCGA-A8-A08F-01A 3 1 5'UTR-CDS Inter-chr q26.13 p21.3 Seq+ 83579 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFT20-SUZ12 IFT20 chr17 28329173 - SUZ12 chr17 31940286 + Exonic hg38 BRCA TCGA-A8-A08F-01A 2 5 Out-of-frame Intra-chr q11.2 q11.2 Tumor suppressor gene Seq+ 83580 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP5C-DYNC1I2 PPP5C chr19 46353989 + DYNC1I2 chr2 171690147 + Exonic hg38 BRCA TCGA-A8-A08F-01A 1 8 CDS-5'UTR Inter-chr q13.32 q31.1 83581 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNFSF10-MGP TNFSF10 chr3 172523253 - MGP chr12 14882280 - Exonic hg38 BRCA TCGA-A8-A08F-01A 2 1 Out-of-frame Inter-chr q26.31 p12.3 Seq+ 83582 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPT1A-CHKA CPT1A chr11 68761535 - CHKA chr11 68054047 - Exonic hg38 BRCA TCGA-A8-A08G-01A 80 318 In-Frame Intra-chr q13.3 q13.2 Seq+ 83583 ChimerSeq TCGA FAWG TCGA_RNA-Seq IPO7-RENBP IPO7 chr11 9408639 + RENBP chrX 153935576 - Exonic hg38 BRCA TCGA-A8-A08G-01A 64 121 Out-of-frame Inter-chr p15.4 q28 Seq+ 83584 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNRPA1-PHRF1 SNRPA1 chr15 101291962 - PHRF1 chr11 601574 + Exonic hg38 BRCA TCGA-A8-A08G-01A 15 27 3'UTR-3'UTR Inter-chr q26.3 p15.5 Seq+ 83585 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENOX2-OSBPL5 ENOX2 chrX 130627958 - OSBPL5 chr11 3129169 - Exonic hg38 BRCA TCGA-A8-A08G-01A 8 20 CDS-5'UTR Inter-chr q26.1 p15.4 Seq+ 83586 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBAP2-TEAD1 UBAP2 chr9 33996223 - TEAD1 chr11 12879708 + Exonic hg38 BRCA TCGA-A8-A08G-01A 3 28 In-Frame Inter-chr p13.3 p15.3 Transcription factor Seq+ 83587 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND5A-PGPEP1L DENND5A chr11 9264961 - PGPEP1L chr15 98998163 - Exonic hg38 BRCA TCGA-A8-A08G-01A 6 8 5'UTR-5'UTR Inter-chr p15.4 q26.3 Seq+ 83588 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL16-KDM6B METTL16 chr17 2464208 - KDM6B chr17 7845872 + Exonic hg38 BRCA TCGA-A8-A08G-01A 3 18 In-Frame Intra-chr p13.3 p13.1 Seq+ 83589 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCSK6-DNM1P49 PCSK6 chr15 101382092 - DNM1P49 chr15 75791758 - Exonic hg38 BRCA TCGA-A8-A08G-01A 1 26 Out-of-frame Intra-chr q26.3 q24.2 83590 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBF2-GVINP2 SBF2 chr11 10193902 - GVINP2 chr11 6748177 + Exonic hg38 BRCA TCGA-A8-A08G-01A 4 14 Out-of-frame Intra-chr p15.4 83591 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTMR1-FATE1 MTMR1 chrX 150718700 + FATE1 chrX 151721395 + Exonic hg38 BRCA TCGA-A8-A08G-01A 1 20 Out-of-frame Intra-chr q28 q28 Seq+ 83592 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBF2-PGAP2 SBF2 chr11 9989497 - PGAP2 chr11 3823883 + Exonic hg38 BRCA TCGA-A8-A08G-01A 1 6 In-Frame Intra-chr p15.4 p15.4 Seq+ 83593 ChimerSeq TCGA FAWG TCGA_RNA-Seq KATNA1-PPP2R1A KATNA1 chr6 149601594 - PPP2R1A chr19 52216529 + Exonic hg38 BRCA TCGA-A8-A08I-01A 44 103 In-Frame Inter-chr q25.1 q13.41 Oncogene Seq+ 83594 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF675-IGSF23 ZNF675 chr19 23687031 - IGSF23 chr19 44618115 + Exonic hg38 BRCA TCGA-A8-A08I-01A 11 108 Out-of-frame Intra-chr p12 Transcription factor q13.31 Seq+ 83595 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP7-ESR1 AKAP7 chr6 131145416 + ESR1 chr6 152094385 + Exonic hg38 BRCA TCGA-A8-A08I-01A 10 72 In-Frame Intra-chr q23.2 q25.1 Oncogene Tumor suppressor gene Transcription factor Seq+ 83596 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF38-GLIPR2 RNF38 chr9 36400554 - GLIPR2 chr9 36162362 + Exonic hg38 BRCA TCGA-A8-A08I-01A 10 56 5'UTR-5'UTR Intra-chr p13.2 p13.3 Seq+ 83597 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1orf112-RPL5 C1orf112 chr1 169798958 + RPL5 chr1 92837456 + Exonic hg38 BRCA TCGA-A8-A08I-01A 11 44 Out-of-frame Intra-chr q24.2 p22.1 Tumor suppressor gene Seq+ 83598 ChimerSeq TCGA FAWG TCGA_RNA-Seq EMC10-MBOAT7 EMC10 chr19 50480977 + MBOAT7 chr19 54188511 - Exonic hg38 BRCA TCGA-A8-A08I-01A 13 27 CDS-5'UTR Intra-chr q13.33 Seq+ 83599 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM168A-DNAJB13 FAM168A chr11 73597923 - DNAJB13 chr11 73958317 + Exonic hg38 BRCA TCGA-A8-A08I-01A 12 24 5'UTR-CDS Intra-chr q13.4 q13.4 Seq+ 83600 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZCCHC7-GLIPR2 ZCCHC7 chr9 37126942 + GLIPR2 chr9 36162362 + Exonic hg38 BRCA TCGA-A8-A08I-01A 6 37 In-Frame Intra-chr p13.2 p13.3 Seq+ 83601 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTF2-GPSM2 MTF2 chr1 93079531 + GPSM2 chr1 108885275 + Exonic hg38 BRCA TCGA-A8-A08I-01A 4 37 5'UTR-5'UTR Intra-chr p22.1 Transcription factor p13.3 Seq+ 83602 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRF1-FOXN3 BRF1 chr14 105247071 - FOXN3 chr14 89412490 - Exonic hg38 BRCA TCGA-A8-A08I-01A 7 21 5'UTR-5'UTR Intra-chr q32.33 Tumor suppressor gene q32.11 Transcription factor Seq+ 83603 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA6A-LSM6 SEMA6A chr5 116486749 - LSM6 chr4 146182912 + Exonic hg38 BRCA TCGA-A8-A08I-01A 7 15 CDS-5'UTR Inter-chr q23.1 q31.22 Seq+ 83604 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPR1-TYW3 XPR1 chr1 180682411 + TYW3 chr1 74736542 + Exonic hg38 BRCA TCGA-A8-A08I-01A 5 20 Out-of-frame Intra-chr q25.3 p31.1 Seq+ 83605 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFCAB11-ASB2 EFCAB11 chr14 89931541 - ASB2 chr14 93954483 - Exonic hg38 BRCA TCGA-A8-A08I-01A 5 12 CDS-5'UTR Intra-chr q32.11 Seq+ 83606 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRMT10B-AR TRMT10B chr9 37776405 + AR chrX 67686010 + Exonic hg38 BRCA TCGA-A8-A08I-01A 3 13 In-Frame Inter-chr p13.2 q12 Oncogene Tumor suppressor gene Transcription factor Seq+ 83607 ChimerSeq TCGA FAWG TCGA_RNA-Seq BLNK-ZNF536 BLNK chr10 96242735 - ZNF536 chr19 30534847 + Exonic hg38 BRCA TCGA-A8-A08I-01A 2 15 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q12 Transcription factor Seq+ 83608 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A51-GLIPR2 SLC25A51 chr9 37903531 - GLIPR2 chr9 36162362 + Exonic hg38 BRCA TCGA-A8-A08I-01A 2 14 3'UTR-CDS Intra-chr p13.1 p13.3 Seq+ 83609 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLTA-ZCCHC7 CLTA chr9 36204179 + ZCCHC7 chr9 37302188 + Exonic hg38 BRCA TCGA-A8-A08I-01A 2 10 Out-of-frame Intra-chr p13.3 p13.2 83610 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR181A1HG-MFSD4A MIR181A1HG chr1 198937226 - MFSD4A chr1 205579751 + Exonic hg38 BRCA TCGA-A8-A08J-01A 79 145 3'UTR-CDS Intra-chr q32.1 q32.1 83611 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD11-CEP112 PSMD11 chr17 32447046 + CEP112 chr17 66183307 - Exonic hg38 BRCA TCGA-A8-A08J-01A 57 141 CDS-5'UTR Intra-chr q11.2 q24.1 Seq+ 83612 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-VMP1 BCAS3 chr17 60910702 + VMP1 chr17 59817712 + Exonic hg38 BRCA TCGA-A8-A08J-01A 25 101 In-Frame Intra-chr q23.2 q23.1 Seq+ 83613 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2G1-SPNS3 UBE2G1 chr17 4366271 - SPNS3 chr17 4478572 + Exonic hg38 BRCA TCGA-A8-A08J-01A 18 115 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 83614 ChimerSeq TCGA FAWG TCGA_RNA-Seq PWP2-SFSWAP PWP2 chr21 44117963 + SFSWAP chr12 131786463 + Exonic hg38 BRCA TCGA-A8-A08J-01A 6 21 In-Frame Inter-chr q22.3 q24.33 Seq+ 83615 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP32-PSMD12 USP32 chr17 60391882 - PSMD12 chr17 67350336 - Exonic hg38 BRCA TCGA-A8-A08J-01A 1 41 Out-of-frame Intra-chr q23.2 q24.2 83616 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYL6-DGKA MYL6 chr12 56163011 + DGKA chr12 55952088 + Exonic hg38 BRCA TCGA-A8-A08J-01A 4 21 Out-of-frame Intra-chr q13.2 q13.2 83617 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED1-NSF MED1 chr17 39447798 - NSF chr17 46674414 + Exonic hg38 BRCA TCGA-A8-A08J-01A 6 11 CDS-3'UTR Intra-chr q12 Tumor suppressor gene 83618 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOSR2-RHOT1 GOSR2 chr17 46949347 + RHOT1 chr17 32200956 + Exonic hg38 BRCA TCGA-A8-A08J-01A 5 11 5'UTR-5'UTR Intra-chr q21.32 q11.2 83619 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGS1-TM9SF1 PGS1 chr17 78400855 + TM9SF1 chr14 24193269 - Exonic hg38 BRCA TCGA-A8-A08J-01A 2 17 5'UTR-5'UTR Inter-chr q25.3 q12 Seq+ 83620 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL48-DTX4 MRPL48 chr11 73825796 + DTX4 chr11 59204676 + Exonic hg38 BRCA TCGA-A8-A08J-01A 5 4 In-Frame Intra-chr q13.4 q12.1 Seq+ 83621 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPATA13-PRRC2C SPATA13 chr13 24300475 + PRRC2C chr1 171524821 + Exonic hg38 BRCA TCGA-A8-A08J-01A 2 15 Out-of-frame Inter-chr q12.12 q24.3 Seq+ 83622 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTRH2-RHBDL3 PTRH2 chr17 59707371 - RHBDL3 chr17 32294294 + Exonic hg38 BRCA TCGA-A8-A08J-01A 4 2 5'UTR-CDS Intra-chr q23.1 q11.2 Seq+ 83623 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGAPB-EPB41L1 RALGAPB chr20 38518000 + EPB41L1 chr20 36173764 + Exonic hg38 BRCA TCGA-A8-A08J-01A 2 10 CDS-5'UTR Intra-chr q11.23 q11.23 Seq+ 83624 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOR1-ZNF287 NCOR1 chr17 16186554 - ZNF287 chr17 16553426 - Exonic hg38 BRCA TCGA-A8-A08J-01A 3 4 Out-of-frame Intra-chr p11.2 Oncogene p11.2 Transcription factor Seq+ 83625 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC57-RBFOX3 CCDC57 chr17 82127692 - RBFOX3 chr17 79482598 - Exonic hg38 BRCA TCGA-A8-A08J-01A 1 8 CDS-5'UTR Intra-chr q25.3 q25.3 83626 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRYL-LNX1 FRYL chr4 48710519 - LNX1 chr4 53696139 - Exonic hg38 BRCA TCGA-A8-A08J-01A 1 8 5'UTR-5'UTR Intra-chr p11 q12 83627 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBX1-DHX40 CBX1 chr17 48101268 - DHX40 chr17 59566627 + Exonic hg38 BRCA TCGA-A8-A08J-01A 1 5 5'UTR-CDS Intra-chr q21.32 q23.1 83628 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCA-PHB PRKCA chr17 66306127 + PHB chr17 49413291 - Exonic hg38 BRCA TCGA-A8-A08J-01A 2 1 CDS-5'UTR Intra-chr q24.2 q21.33 Tumor suppressor gene Seq+ 83629 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUS1-ICOSLG PUS1 chr12 131932312 + ICOSLG chr21 44238488 - Exonic hg38 BRCA TCGA-A8-A08J-01A 2 1 Out-of-frame Inter-chr q24.33 q22.3 Seq+ 83630 ChimerSeq TCGA FAWG TCGA_RNA-Seq QSOX1-NFASC QSOX1 chr1 180166591 + NFASC chr1 204920632 + Exonic hg38 BRCA TCGA-A8-A08J-01A 1 3 CDS-5'UTR Intra-chr q25.2 q32.1 83631 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOH-N4BP2 RHOH chr4 40197300 + N4BP2 chr4 40142724 + Exonic hg38 BRCA TCGA-A8-A08J-01A 1 2 5'UTR-CDS Intra-chr p14 Oncogene p14 Seq+ 83632 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNC1-CA10 PITPNC1 chr17 67632238 + CA10 chr17 51653736 - Exonic hg38 BRCA TCGA-A8-A08J-01A 1 1 In-Frame Intra-chr q24.2 q22 83633 ChimerSeq TCGA FAWG TCGA_RNA-Seq WASH5P-FAM107B WASH5P chr19 66346 - FAM107B chr10 14522019 - Exonic hg38 BRCA TCGA-A8-A08L-01A 16 13 3'UTR-CDS Inter-chr p13.3 p13 83634 ChimerSeq TCGA FAWG TCGA_RNA-Seq IPO11-TNFAIP8 IPO11 chr5 62474464 + TNFAIP8 chr5 119392816 + Exonic hg38 BRCA TCGA-A8-A08L-01A 9 25 In-Frame Intra-chr q12.1 q23.1 Seq+ 83635 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTBP2-ADAM12 CTBP2 chr10 125110990 - ADAM12 chr10 126330509 - Exonic hg38 BRCA TCGA-A8-A08L-01A 2 34 5'UTR-CDS Intra-chr q26.13 q26.2 Seq+ 83636 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAP3-ATF3 DAP3 chr1 155717128 + ATF3 chr1 212615018 + Exonic hg38 BRCA TCGA-A8-A08L-01A 5 13 CDS-5'UTR Intra-chr q22 q32.3 Tumor suppressor gene Transcription factor Seq+ 83637 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPM-GVINP2 HNRNPM chr19 8445111 + GVINP2 chr11 6748177 + Exonic hg38 BRCA TCGA-A8-A08L-01A 3 8 Out-of-frame Inter-chr p13.2 83638 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASK-EYA2 CASK chrX 41739384 - EYA2 chr20 46990001 + Exonic hg38 BRCA TCGA-A8-A08L-01A 1 5 CDS-5'UTR Inter-chr p11.4 CAMK:CASK q13.12 Seq+ 83639 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBF2-TMEM99 SBF2 chr11 10193902 - TMEM99 chr17 40833115 + Exonic hg38 BRCA TCGA-A8-A08L-01A 1 3 CDS-5'UTR Inter-chr p15.4 q21.2 Seq+ 83640 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXK2-MYO18A FOXK2 chr17 82587272 + MYO18A chr17 29082438 - Exonic hg38 BRCA TCGA-A8-A08O-01A 29 71 Out-of-frame Intra-chr q25.3 Transcription factor q11.2 Oncogene Seq+ 83641 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK1-NPS DOCK1 chr10 127343746 + NPS chr10 127549489 + Exonic hg38 BRCA TCGA-A8-A08O-01A 14 28 In-Frame Intra-chr q26.2 q26.2 Seq+ 83642 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP1-WDR11 AGAP1 chr2 235494849 + WDR11 chr10 120900029 + Exonic hg38 BRCA TCGA-A8-A08O-01A 10 31 In-Frame Inter-chr q37.2 q26.12 Tumor suppressor gene Seq+ 83643 ChimerSeq TCGA FAWG TCGA_RNA-Seq MMD-PRKCA MMD chr17 55421670 - PRKCA chr17 66732688 + Exonic hg38 BRCA TCGA-A8-A08O-01A 7 6 Out-of-frame Intra-chr q22 q24.2 Seq+ 83644 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL12-USP32 MRPL12 chr17 81704716 + USP32 chr17 60345608 - Exonic hg38 BRCA TCGA-A8-A08O-01A 6 10 Out-of-frame Intra-chr q25.3 q23.2 Seq+ 83645 ChimerSeq TCGA FAWG TCGA_RNA-Seq YPEL2-SDF2 YPEL2 chr17 59353526 + SDF2 chr17 28655483 - Exonic hg38 BRCA TCGA-A8-A08O-01A 4 17 Out-of-frame Intra-chr q22 q11.2 Seq+ 83646 ChimerSeq TCGA FAWG TCGA_RNA-Seq APPBP2-PECAM1 APPBP2 chr17 60525794 - PECAM1 chr17 64323845 - Exonic hg38 BRCA TCGA-A8-A08O-01A 2 15 In-Frame Intra-chr q23.2 q23.3 Seq+ 83647 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGB4-NARF ITGB4 chr17 75757107 + NARF chr17 82468764 + Exonic hg38 BRCA TCGA-A8-A08O-01A 2 7 Out-of-frame Intra-chr q25.1 q25.3 Seq+ 83648 ChimerSeq TCGA FAWG TCGA_RNA-Seq APP-RCAN1 APP chr21 26111979 - RCAN1 chr21 34523710 - Exonic hg38 BRCA TCGA-A8-A08P-01A 13 69 In-Frame Intra-chr q21.3 q22.12 Seq+ 83649 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCCB-DLG1 PCCB chr3 136329984 + DLG1 chr3 197194589 - Exonic hg38 BRCA TCGA-A8-A08P-01A 5 27 Out-of-frame Intra-chr q22.3 q29 Tumor suppressor gene Seq+ 83650 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD1B-TMEM120B SETD1B chr12 121819490 + TMEM120B chr12 121776369 + Exonic hg38 BRCA TCGA-A8-A08P-01A 6 15 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 83651 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSL2-PPP2R3A MSL2 chr3 136194972 - PPP2R3A chr3 136145043 + Exonic hg38 BRCA TCGA-A8-A08P-01A 6 6 Out-of-frame Intra-chr q22.3 q22.2 Seq+ 83652 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC20A2-HIP1 SLC20A2 chr8 42428758 - HIP1 chr7 75542974 - Exonic hg38 BRCA TCGA-A8-A08P-01A 3 14 In-Frame Inter-chr p11.21 q11.23 Seq+ 83653 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRG2-FCGRT PRRG2 chr19 49583952 + FCGRT chr19 49524507 + Exonic hg38 BRCA TCGA-A8-A08P-01A 4 7 In-Frame Intra-chr q13.33 q13.33 Seq+ 83654 ChimerSeq TCGA FAWG TCGA_RNA-Seq GMPR-NDUFAF6 GMPR chr6 16254735 + NDUFAF6 chr8 95031995 + Exonic hg38 BRCA TCGA-A8-A08P-01A 2 9 Out-of-frame Inter-chr p22.3 q22.1 Seq+ 83655 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRWD1-LCA5L BRWD1 chr21 39213481 - LCA5L chr21 39429211 - Exonic hg38 BRCA TCGA-A8-A08P-01A 2 7 CDS-5'UTR Intra-chr q22.2 q22.2 Seq+ 83656 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2G1-CXCL16 UBE2G1 chr17 4366271 - CXCL16 chr17 4735508 - Exonic hg38 BRCA TCGA-A8-A08P-01A 1 4 In-Frame Intra-chr p13.2 p13.2 83657 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM1-ZNF890P PUM1 chr1 30974651 - ZNF890P chr7 5127743 - Exonic hg38 BRCA TCGA-A8-A08R-01A 16 41 CDS-3'UTR Inter-chr p35.2 p22.1 Seq+ 83658 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM181-HMGCLL1 TMEM181 chr6 158608750 + HMGCLL1 chr6 55439559 - Exonic hg38 BRCA TCGA-A8-A08R-01A 16 17 Out-of-frame Intra-chr q25.3 p12.1 Seq+ 83659 ChimerSeq TCGA FAWG TCGA_RNA-Seq SS18L1-GID8 SS18L1 chr20 62159961 + GID8 chr20 62943495 + Exonic hg38 BRCA TCGA-A8-A08R-01A 12 32 In-Frame Intra-chr q13.33 q13.33 Seq+ 83660 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMNB2-GNG7 LMNB2 chr19 2444404 - GNG7 chr19 2555188 - Exonic hg38 BRCA TCGA-A8-A08R-01A 11 31 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 83661 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A13-STK31 SLC25A13 chr7 96277196 - STK31 chr7 23752717 + Exonic hg38 BRCA TCGA-A8-A08R-01A 1 9 Out-of-frame Intra-chr q21.3 p15.3 Seq+ 83662 ChimerSeq TCGA FAWG TCGA_RNA-Seq CABLES1-RBBP8 CABLES1 chr18 23136607 + RBBP8 chr18 22968806 + Exonic hg38 BRCA TCGA-A8-A08R-01A 1 2 In-Frame Intra-chr q11.2 Tumor suppressor gene q11.2 Tumor suppressor gene Seq+ 83663 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAA20-RIN2 NAA20 chr20 20017449 + RIN2 chr20 19964952 + Exonic hg38 BRCA TCGA-A8-A08R-01A 1 1 Out-of-frame Intra-chr p11.23 p11.23 83664 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUMA1-AATF NUMA1 chr11 72069842 - AATF chr17 36986617 + Exonic hg38 BRCA TCGA-A8-A08S-01A 95 288 3'UTR-3'UTR Inter-chr q13.4 Oncogene Seq+ 83665 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-MYO1D FBXL20 chr17 39301001 - MYO1D chr17 32780784 - Exonic hg38 BRCA TCGA-A8-A08S-01A 10 20 Out-of-frame Intra-chr q12 q11.2 Seq+ 83666 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD11-CDK12 PSMD11 chr17 32447046 + CDK12 chr17 39551038 + Exonic hg38 BRCA TCGA-A8-A08S-01A 8 17 CDS-3'UTR Intra-chr q11.2 q12 Oncogene 83667 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRTOMT-UVRAG LRTOMT chr11 72080885 + UVRAG chr11 76007534 + Exonic hg38 BRCA TCGA-A8-A08S-01A 7 12 5'UTR-CDS Intra-chr q13.4 q13.5 Tumor suppressor gene Seq+ 83668 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFFL-NR1D1 RFFL chr17 35089105 - NR1D1 chr17 40100266 - Exonic hg38 BRCA TCGA-A8-A08S-01A 7 11 3'UTR-5'UTR Intra-chr q12 q21.1 Transcription factor Seq+ 83669 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTDH-SPIDR MTDH chr8 97719189 + SPIDR chr8 47673801 + Exonic hg38 BRCA TCGA-A8-A08T-01A 2 10 Out-of-frame Intra-chr q22.1 q11.21 Seq+ 83670 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGAP3-STAC2 PGAP3 chr17 39687834 - STAC2 chr17 39217173 - Exonic hg38 BRCA TCGA-A8-A08X-01A 74 302 In-Frame Intra-chr q12 Oncogene q12 Seq+ 83671 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPKAP1-VAV2 MAPKAP1 chr9 125657651 - VAV2 chr9 133861432 - Exonic hg38 BRCA TCGA-A8-A08X-01A 69 274 In-Frame Intra-chr q33.3 q34.2 Seq+ 83672 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM129B-OLFM1 FAM129B chr9 127568820 - OLFM1 chr9 135090195 + Exonic hg38 BRCA TCGA-A8-A08X-01A 67 112 Out-of-frame Intra-chr q34.11 q34.3 Seq+ 83673 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLFN11-MIEN1 SLFN11 chr17 35373474 - MIEN1 chr17 39730291 - Exonic hg38 BRCA TCGA-A8-A08X-01A 20 126 5'UTR-CDS Intra-chr q12 q12 Seq+ 83674 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM129B-SEC16A FAM129B chr9 127568820 - SEC16A chr9 136448161 - Exonic hg38 BRCA TCGA-A8-A08X-01A 12 32 Out-of-frame Intra-chr q34.11 q34.3 Seq+ 83675 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPKAP1-PRRC2B MAPKAP1 chr9 125657651 - PRRC2B chr9 131430090 + Exonic hg38 BRCA TCGA-A8-A08X-01A 8 20 5'UTR-5'UTR Intra-chr q33.3 q34.13 Seq+ 83676 ChimerSeq TCGA FAWG TCGA_RNA-Seq NACC2-NUP214 NACC2 chr9 136049636 - NUP214 chr9 131233454 + Exonic hg38 BRCA TCGA-A8-A08X-01A 9 13 Out-of-frame Intra-chr q34.3 Transcription factor q34.13 Oncogene Seq+ 83677 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP2B1-ERBB2 AP2B1 chr17 35641975 + ERBB2 chr17 39688696 + Exonic hg38 BRCA TCGA-A8-A08X-01A 5 11 CDS-5'UTR Intra-chr q12 q12 Oncogene Seq+ 83678 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1XR1-LXN TBL1XR1 chr3 177032971 - LXN chr3 158671019 - Exonic hg38 BRCA TCGA-A8-A08X-01A 3 15 In-Frame Intra-chr q26.32 q25.32 Tumor suppressor gene Seq+ 83679 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIP4K2B-ERBB2 PIP4K2B chr17 38799266 - ERBB2 chr17 39699537 + Exonic hg38 BRCA TCGA-A8-A08X-01A 1 21 5'UTR-5'UTR Intra-chr q12 q12 Oncogene 83680 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRD3-PIP5KL1 BRD3 chr9 134067945 - PIP5KL1 chr9 127927331 - Exonic hg38 BRCA TCGA-A8-A08X-01A 3 4 5'UTR-CDS Intra-chr q34.2 Atypical:BRD Oncogene q34.11 83681 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNE2-DMRTA1 SYNE2 chr14 64167639 + DMRTA1 chr9 22451064 + Exonic hg38 BRCA TCGA-A8-A08Z-01A 1 2 Out-of-frame Inter-chr q23.2 p21.3 Transcription factor Seq+ 83682 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSKU-SFRP4 TSKU chr11 76783404 + SFRP4 chr7 37926774 - Exonic hg38 BRCA TCGA-A8-A091-01A 23 83 5'UTR-5'UTR Inter-chr q13.5 p14.1 Tumor suppressor gene Seq+ 83683 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF4-CDH22 TAF4 chr20 62064451 - CDH22 chr20 46227627 - Exonic hg38 BRCA TCGA-A8-A091-01A 13 32 5'UTR-CDS Intra-chr q13.12 Seq+ 83684 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNAS-CPB1 GNAS chr20 58898985 + CPB1 chr3 148828002 + Exonic hg38 BRCA TCGA-A8-A091-01A 1 52 In-Frame Inter-chr q13.32 Oncogene q24 83685 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK1-LRIG3 ROCK1 chr18 21045292 - LRIG3 chr12 58914336 - Exonic hg38 BRCA TCGA-A8-A091-01A 2 30 In-Frame Inter-chr q11.1 AGC:DMPK q14.1 Tumor suppressor gene Seq+ 83686 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA5-CDH4 NCOA5 chr20 46079387 - CDH4 chr20 61743563 + Exonic hg38 BRCA TCGA-A8-A091-01A 3 16 CDS-3'UTR Intra-chr q13.12 Tumor suppressor gene q13.33 Tumor suppressor gene Seq+ 83687 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2CD3-ABCA13 C2CD3 chr11 74132844 - ABCA13 chr7 48481036 + Exonic hg38 BRCA TCGA-A8-A091-01A 4 9 Out-of-frame Inter-chr q13.4 p12.3 Seq+ 83688 ChimerSeq TCGA FAWG TCGA_RNA-Seq EMSY-BBS9 EMSY chr11 76496469 + BBS9 chr7 33155638 + Exonic hg38 BRCA TCGA-A8-A091-01A 3 10 Out-of-frame Inter-chr q13.5 p14.3 83689 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPY19L1-NRXN2 DPY19L1 chr7 35010468 - NRXN2 chr11 64620372 - Exonic hg38 BRCA TCGA-A8-A091-01A 1 8 Out-of-frame Inter-chr p14.2 q13.1 Seq+ 83690 ChimerSeq TCGA FAWG TCGA_RNA-Seq SQSTM1-CPB1 SQSTM1 chr5 179836664 + CPB1 chr3 148840686 + Exonic hg38 BRCA TCGA-A8-A091-01A 1000 1000 3'UTR-CDS Inter-chr q35.3 q24 83691 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB40C-CPB1 RAB40C chr16 628302 + CPB1 chr3 148859819 + Exonic hg38 BRCA TCGA-A8-A091-01A 1000 1000 Out-of-frame Inter-chr p13.3 q24 83692 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDR1-MRPS18B DDR1 chr6 30892188 + MRPS18B chr6 30619493 + Exonic hg38 BRCA TCGA-A8-A092-01A 2 21 3'UTR-3'UTR Intra-chr TK:DDR 83693 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL48-DTX4 MRPL48 chr11 73825796 + DTX4 chr11 59204676 + Exonic hg38 BRCA TCGA-A8-A092-01A 3 3 In-Frame Intra-chr q13.4 q12.1 Seq+ 83694 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL48-DTX4 MRPL48 chr11 73825796 + DTX4 chr11 59204676 + Exonic hg38 BRCA TCGA-A8-A093-01A 26 51 In-Frame Intra-chr q13.4 q12.1 Seq+ 83695 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNRF3-ASCC2 ZNRF3 chr22 28884066 + ASCC2 chr22 29825257 - Exonic hg38 BRCA TCGA-A8-A094-01A 41 214 In-Frame Intra-chr q12.1 q12.2 Seq+ 83696 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLK1-SSB TLK1 chr2 171082781 - SSB chr2 169805474 + Exonic hg38 BRCA TCGA-A8-A094-01A 16 61 In-Frame Intra-chr q31.1 Other:TLK q31.1 Seq+ 83697 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHTN1-EMX2OS SHTN1 chr10 117005022 - EMX2OS chr10 117492109 - Exonic hg38 BRCA TCGA-A8-A094-01A 6 52 CDS-3'UTR Intra-chr q25.3 q26.11 83698 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC16A-QSOX2 SEC16A chr9 136459134 - QSOX2 chr9 136211452 - Exonic hg38 BRCA TCGA-A8-A094-01A 5 20 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 83699 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF544-SENP6 ZNF544 chr19 58230462 + SENP6 chr6 75675860 + Exonic hg38 BRCA TCGA-A8-A094-01A 3 16 5'UTR-CDS Inter-chr q13.43 Transcription factor q14.1 Seq+ 83700 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFYVE26-RAD51B ZFYVE26 chr14 67816534 - RAD51B chr14 68411424 + Exonic hg38 BRCA TCGA-A8-A094-01A 4 6 5'UTR-CDS Intra-chr q24.1 q24.1 Seq+ 83701 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-AS SHANK2 chr11 71056481 - AS chr11 27658241 + Exonic hg38 BRCA TCGA-A8-A094-01A 1 7 Out-of-frame Intra-chr q13.4 83702 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-COA4 SHANK2 chr11 70896501 - COA4 chr11 73873394 - Exonic hg38 BRCA TCGA-A8-A094-01A 1 4 CDS-5'UTR Intra-chr q13.4 q13.4 83703 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNDC3A-ZMYM2 FNDC3A chr13 49006289 + ZMYM2 chr13 20051433 + Exonic hg38 BRCA TCGA-A8-A096-01A 1 1 In-Frame Intra-chr q14.2 q12.11 83704 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAM1-ZFPM2 TRAM1 chr8 70594506 - ZFPM2 chr8 105634246 + Exonic hg38 BRCA TCGA-A8-A097-01A 20 107 In-Frame Intra-chr q13.3 q22.3 Transcription factor Seq+ 83705 ChimerSeq TCGA FAWG TCGA_RNA-Seq CARD8-BCKDHA CARD8 chr19 48240962 - BCKDHA chr19 41410637 + Exonic hg38 BRCA TCGA-A8-A097-01A 11 33 Out-of-frame Intra-chr q13.33 q13.2 Seq+ 83706 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTTN-MYEOV CTTN chr11 70414652 + MYEOV chr11 69366743 + Exonic hg38 BRCA TCGA-A8-A097-01A 5 25 CDS-3'UTR Intra-chr q13.3 q13.3 Seq+ 83707 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP22-MMS22L USP22 chr17 21042665 - MMS22L chr6 97278898 - Exonic hg38 BRCA TCGA-A8-A097-01A 8 9 Out-of-frame Inter-chr p11.2 q16.1 Seq+ 83708 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO1-CYP2R1 ANO1 chr11 70078714 + CYP2R1 chr11 14885917 - Exonic hg38 BRCA TCGA-A8-A097-01A 7 11 In-Frame Intra-chr q13.3 p15.2 Seq+ 83709 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARCH2-PLVAP 2019_ 3_ 2_ chr19 8422016 + PLVAP chr19 17366195 - Exonic hg38 BRCA TCGA-A8-A097-01A 4 8 Out-of-frame Intra-chr p13.2 p13.11 Seq+ 83710 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRTOMT-NFIC LRTOMT chr11 72089165 + NFIC chr19 3449014 + Exonic hg38 BRCA TCGA-A8-A097-01A 2 11 In-Frame Inter-chr q13.4 p13.3 Transcription factor Seq+ 83711 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFAND3-SYNE1 ZFAND3 chr6 38116739 + SYNE1 chr6 152511103 - Exonic hg38 BRCA TCGA-A8-A097-01A 2 8 Out-of-frame Intra-chr p21.2 q25.2 Oncogene 83712 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPLD1-PCNP GPLD1 chr6 24449789 - PCNP chr3 101590215 + Exonic hg38 BRCA TCGA-A8-A097-01A 2 3 In-Frame Inter-chr p22.3 q12.3 83713 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAXE-RHBG NAXE chr1 156591986 + RHBG chr1 156382068 + Exonic hg38 BRCA TCGA-A8-A097-01A 1 4 Out-of-frame Intra-chr q22 q22 83714 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0753-TP53 KIAA0753 chr17 6620788 - TP53 chr17 7676622 - Exonic hg38 BRCA TCGA-A8-A097-01A 1 1 CDS-5'UTR Intra-chr p13.1 p13.1 Oncogene Tumor suppressor gene Transcription factor 83715 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC31A-MUC7 SEC31A chr4 82856952 - MUC7 chr4 70472215 + Exonic hg38 BRCA TCGA-A8-A09A-01A 37 94 CDS-5'UTR Intra-chr q21.22 q13.3 Seq+ 83716 ChimerSeq TCGA FAWG TCGA_RNA-Seq VMP1-PSMA6 VMP1 chr17 59773885 + PSMA6 chr14 35317249 + Exonic hg38 BRCA TCGA-A8-A09A-01A 7 42 Out-of-frame Inter-chr q23.1 q13.2 Seq+ 83717 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC16A5-MRPL58 SLC16A5 chr17 75100816 + MRPL58 chr17 75019700 + Exonic hg38 BRCA TCGA-A8-A09A-01A 3 19 In-Frame Intra-chr q25.1 q25.1 83718 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS8-DPY19L4 INTS8 chr8 94823561 + DPY19L4 chr8 94766612 + Exonic hg38 BRCA TCGA-A8-A09A-01A 4 10 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 83719 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHNAK-INTS5 AHNAK chr11 62491732 - INTS5 chr11 62649999 - Exonic hg38 BRCA TCGA-A8-A09A-01A 3 6 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q12.3 Seq+ 83720 ChimerSeq TCGA FAWG TCGA_RNA-Seq HECTD2-PCGF5 HECTD2 chr10 91425410 + PCGF5 chr10 91271638 + Exonic hg38 BRCA TCGA-A8-A09A-01A 2 9 Out-of-frame Intra-chr q23.32 q23.32 Seq+ 83721 ChimerSeq TCGA FAWG TCGA_RNA-Seq YWHAB-STK4 YWHAB chr20 44885886 + STK4 chr20 44987132 + Exonic hg38 BRCA TCGA-A8-A09A-01A 2 3 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 83722 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF208-ST3GAL4 ZNF208 chr19 22010792 - ST3GAL4 chr11 126409268 + Exonic hg38 BRCA TCGA-A8-A09A-01A 2 3 In-Frame Inter-chr p12 Transcription factor q24.2 Seq+ 83723 ChimerSeq TCGA FAWG TCGA_RNA-Seq LNX1-GABRB1 LNX1 chr4 53573623 - GABRB1 chr4 47320127 + Exonic hg38 BRCA TCGA-A8-A09A-01A 1 6 In-Frame Intra-chr q12 p12 Seq+ 83724 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKDC-GSR PRKDC chr8 47935732 - GSR chr8 30709902 - Exonic hg38 BRCA TCGA-A8-A09A-01A 1 6 Out-of-frame Intra-chr q11.21 Oncogene p12 83725 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB8OS-IGF2BP1 ZBTB8OS chr1 32627508 - IGF2BP1 chr17 49031910 + Exonic hg38 BRCA TCGA-A8-A09A-01A 1 5 In-Frame Inter-chr p35.1 q21.32 Seq+ 83726 ChimerSeq TCGA FAWG TCGA_RNA-Seq E2F6-LYRM4 E2F6 chr2 11465772 - LYRM4 chr6 5216738 - Exonic hg38 BRCA TCGA-A8-A09A-01A 1 4 Out-of-frame Inter-chr p25.1 Transcription factor p25.1 Seq+ 83727 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDC4-TP53TG5 SDC4 chr20 45333023 - TP53TG5 chr20 45377613 - Exonic hg38 BRCA TCGA-A8-A09A-01A 1 3 In-Frame Intra-chr q13.12 q13.12 Seq+ 83728 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTSB-DEFB135 CTSB chr8 11868001 - DEFB135 chr8 11984421 + Exonic hg38 BRCA TCGA-A8-A09B-01A 1 8 3'UTR-5'UTR Intra-chr p23.1 p23.1 83729 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM135-ALDH3B2 TMEM135 chr11 87038186 + ALDH3B2 chr11 67667635 - Exonic hg38 BRCA TCGA-A8-A09C-01A 46 290 5'UTR-5'UTR Intra-chr q14.2 q13.2 Seq+ 83730 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBX4-EFCAB5 CBX4 chr17 79837837 - EFCAB5 chr17 30091871 + Exonic hg38 BRCA TCGA-A8-A09C-01A 45 177 Out-of-frame Intra-chr q25.3 q11.2 Seq+ 83731 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSH2-NDUFS4 SSH2 chr17 29929938 - NDUFS4 chr5 53603452 + Exonic hg38 BRCA TCGA-A8-A09C-01A 44 131 Out-of-frame Inter-chr q11.2 q11.2 Seq+ 83732 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTBN2-GDPD4 SPTBN2 chr11 66696277 - GDPD4 chr11 77287420 - Exonic hg38 BRCA TCGA-A8-A09C-01A 22 45 CDS-5'UTR Intra-chr q13.2 q13.5 Seq+ 83733 ChimerSeq TCGA FAWG TCGA_RNA-Seq NARS2-INTS4 NARS2 chr11 78528842 - INTS4 chr11 77879127 - Exonic hg38 BRCA TCGA-A8-A09C-01A 5 11 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 83734 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-SUZ12 NF1 chr17 31206371 + SUZ12 chr17 31966147 + Exonic hg38 BRCA TCGA-A8-A09C-01A 1 12 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Tumor suppressor gene 83735 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLCE-SPESP1 GLCE chr15 69160757 + SPESP1 chr15 68945599 + Exonic hg38 BRCA TCGA-A8-A09C-01A 1 5 5'UTR-CDS Intra-chr q23 q23 Seq+ 83736 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLCE-NOX5 GLCE chr15 69160757 + NOX5 chr15 68974729 + Exonic hg38 BRCA TCGA-A8-A09C-01A 1 3 5'UTR-5'UTR Intra-chr q23 q23 Seq+ 83737 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG13-TSPAN18 ATG13 chr11 46617890 + TSPAN18 chr11 44860328 + Exonic hg38 BRCA TCGA-A8-A09D-01A 13 118 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 83738 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF21A-CAMK1D PHF21A chr11 46076754 - CAMK1D chr10 12769673 + Exonic hg38 BRCA TCGA-A8-A09D-01A 16 29 In-Frame Inter-chr p11.2 Transcription factor p13 Seq+ 83739 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUMF1-CNTN4 SUMF1 chr3 4417128 - CNTN4 chr3 2988345 + Exonic hg38 BRCA TCGA-A8-A09D-01A 8 27 Out-of-frame Intra-chr p26.1 p26.3 Seq+ 83740 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMK1D-TSPAN18 CAMK1D chr10 12814307 + TSPAN18 chr11 44764426 + Exonic hg38 BRCA TCGA-A8-A09D-01A 5 25 CDS-5'UTR Inter-chr p13 p11.2 Seq+ 83741 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARFGEF2-NCOA3 ARFGEF2 chr20 48963898 + NCOA3 chr20 47583183 + Exonic hg38 BRCA TCGA-A8-A09D-01A 5 11 CDS-5'UTR Intra-chr q13.13 q13.12 Transcription factor Seq+ 83742 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLPB-ARMC4 CLPB chr11 72301803 - ARMC4 chr10 27940805 - Exonic hg38 BRCA TCGA-A8-A09D-01A 3 19 In-Frame Inter-chr q13.4 p12.1 Seq+ 83743 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARFGEF2-TSHZ2 ARFGEF2 chr20 48963898 + TSHZ2 chr20 53253499 + Exonic hg38 BRCA TCGA-A8-A09D-01A 4 9 In-Frame Intra-chr q13.13 q13.2 Transcription factor Seq+ 83744 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIN7A-NAV3 LIN7A chr12 80811465 - NAV3 chr12 77571859 + Exonic hg38 BRCA TCGA-A8-A09D-01A 3 9 3'UTR-5'UTR Intra-chr q21.31 q21.2 83745 ChimerSeq TCGA FAWG TCGA_RNA-Seq AZIN1-YME1L1 AZIN1 chr8 102839650 - YME1L1 chr10 27123699 - Exonic hg38 BRCA TCGA-A8-A09D-01A 1 15 Out-of-frame Inter-chr q22.3 p12.1 83746 ChimerSeq TCGA FAWG TCGA_RNA-Seq HEATR5A-FLJ22447 HEATR5A chr14 31358637 - FLJ22447 chr14 61657605 + Exonic hg38 BRCA TCGA-A8-A09D-01A 1 9 CDS-3'UTR Intra-chr q12 q23.1 83747 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEX16-AMBRA1 PEX16 chr11 45917458 - AMBRA1 chr11 46548500 - Exonic hg38 BRCA TCGA-A8-A09D-01A 2 5 CDS-5'UTR Intra-chr p11.2 p11.2 Seq+ 83748 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAT3-ZFPM2 STAT3 chr17 42388279 - ZFPM2 chr8 105634246 + Exonic hg38 BRCA TCGA-A8-A09D-01A 2 3 5'UTR-CDS Inter-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q22.3 Transcription factor Seq+ 83749 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM11-SLC2A5 TRIM11 chr1 228400964 - SLC2A5 chr1 9038506 - Exonic hg38 BRCA TCGA-A8-A09E-01A 6 44 In-Frame Intra-chr q42.13 p36.23 Seq+ 83750 ChimerSeq TCGA FAWG TCGA_RNA-Seq STC2-AP1G1 STC2 chr5 173323219 - AP1G1 chr16 71739341 - Exonic hg38 BRCA TCGA-A8-A09E-01A 3 27 Out-of-frame Inter-chr q35.2 q22.2 Seq+ 83751 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHNAK-RPS6KA4 AHNAK chr11 62491732 - RPS6KA4 chr11 64365301 + Exonic hg38 BRCA TCGA-A8-A09E-01A 5 18 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q13.1 Seq+ 83752 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGF1R-PRPS1 IGF1R chr15 98943052 + PRPS1 chrX 107639295 + Exonic hg38 BRCA TCGA-A8-A09E-01A 1 7 In-Frame Inter-chr q26.3 TK:InsR Oncogene q22.3 Seq+ 83753 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP32-PCTP USP32 chr17 60391882 - PCTP chr17 55767335 + Exonic hg38 BRCA TCGA-A8-A09G-01A 23 94 Out-of-frame Intra-chr q23.2 q22 Seq+ 83754 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANSL1-PPP1R1B KANSL1 chr17 46162477 - PPP1R1B chr17 39627306 + Exonic hg38 BRCA TCGA-A8-A09G-01A 17 84 Out-of-frame Intra-chr q12 Tumor suppressor gene Seq+ 83755 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC8D-C1orf168 LRRC8D chr1 89843782 + C1orf168 chr1 56767938 - Exonic hg38 BRCA TCGA-A8-A09G-01A 14 61 Out-of-frame Intra-chr p22.2 p32.2 Seq+ 83756 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF12-SIK3 ARHGEF12 chr11 120337275 + SIK3 chr11 116957064 - Exonic hg38 BRCA TCGA-A8-A09G-01A 16 42 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Seq+ 83757 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-PRKAA2 BCAS3 chr17 60808076 + PRKAA2 chr1 56691394 + Exonic hg38 BRCA TCGA-A8-A09G-01A 2 29 In-Frame Inter-chr q23.2 p32.2 Tumor suppressor gene Seq+ 83758 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEX2-WFDC21P TEX2 chr17 64263168 - WFDC21P chr17 60085203 - Exonic hg38 BRCA TCGA-A8-A09I-01A 72 605 5'UTR-3'UTR Intra-chr q23.3 q23.1 83759 ChimerSeq TCGA FAWG TCGA_RNA-Seq DUSP14-EME1 DUSP14 chr17 37489952 + EME1 chr17 50375184 + Exonic hg38 BRCA TCGA-A8-A09I-01A 60 113 Out-of-frame Intra-chr q12 q21.33 Seq+ 83760 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP32-RN7SL606P USP32 chr17 60226043 - RN7SL606P chr17 60696461 + Exonic hg38 BRCA TCGA-A8-A09I-01A 58 120 Out-of-frame Intra-chr q23.2 q23.2 83761 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARA-MYO1D RARA chr17 40331396 + MYO1D chr17 32780784 - Exonic hg38 BRCA TCGA-A8-A09I-01A 37 163 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q11.2 Seq+ 83762 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLTC-WFDC21P CLTC chr17 59644483 + WFDC21P chr17 60085203 - Exonic hg38 BRCA TCGA-A8-A09I-01A 29 67 CDS-3'UTR Intra-chr q23.1 q23.1 83763 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED1-GDPD1 MED1 chr17 39423327 - GDPD1 chr17 59257751 + Exonic hg38 BRCA TCGA-A8-A09I-01A 19 80 In-Frame Intra-chr q12 Tumor suppressor gene q22 Seq+ 83764 ChimerSeq TCGA FAWG TCGA_RNA-Seq C17orf75-TOP2A C17orf75 chr17 32335323 - TOP2A chr17 40413625 - Exonic hg38 BRCA TCGA-A8-A09I-01A 10 51 Out-of-frame Intra-chr q11.2 q21.2 Seq+ 83765 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK12-PPM1E CDK12 chr17 39471763 + PPM1E chr17 58969539 + Exonic hg38 BRCA TCGA-A8-A09I-01A 8 29 Out-of-frame Intra-chr q12 Oncogene q22 Seq+ 83766 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBTD1-EFCAB3 MBTD1 chr17 51259143 - EFCAB3 chr17 62373814 + Exonic hg38 BRCA TCGA-A8-A09I-01A 5 31 5'UTR-CDS Intra-chr q21.33 q23.2 Seq+ 83767 ChimerSeq TCGA FAWG TCGA_RNA-Seq STXBP4-MSI2 STXBP4 chr17 55073076 + MSI2 chr17 57615970 + Exonic hg38 BRCA TCGA-A8-A09I-01A 3 38 In-Frame Intra-chr q22 q22 Seq+ 83768 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-NLE1 NF1 chr17 31169997 + NLE1 chr17 35137193 - Exonic hg38 BRCA TCGA-A8-A09I-01A 6 15 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q12 Seq+ 83769 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL2B-CA10 METTL2B chr7 128480696 + CA10 chr17 51661846 - Exonic hg38 BRCA TCGA-A8-A09I-01A 7 10 Out-of-frame Inter-chr q32.1 q22 83770 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-CASC3 BCAS3 chr17 60747279 + CASC3 chr17 40161753 + Exonic hg38 BRCA TCGA-A8-A09I-01A 3 20 Out-of-frame Intra-chr q23.2 q21.1 Seq+ 83771 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-TLK2 FBXL20 chr17 39343180 - TLK2 chr17 62560016 + Exonic hg38 BRCA TCGA-A8-A09I-01A 4 14 Out-of-frame Intra-chr q12 q23.2 Other:TLK Seq+ 83772 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPF2-EZH1 WIPF2 chr17 40265146 + EZH1 chr17 42730918 - Exonic hg38 BRCA TCGA-A8-A09I-01A 5 10 CDS-5'UTR Intra-chr q21.2 q21.2 Tumor suppressor gene Seq+ 83773 ChimerSeq TCGA FAWG TCGA_RNA-Seq STXBP4-PPM1D STXBP4 chr17 55047154 + PPM1D chr17 60623521 + Exonic hg38 BRCA TCGA-A8-A09I-01A 5 8 Out-of-frame Intra-chr q22 q23.2 Seq+ 83774 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-RAD51C BCAS3 chr17 61084564 + RAD51C chr17 58694931 + Exonic hg38 BRCA TCGA-A8-A09I-01A 1 23 In-Frame Intra-chr q23.2 q22 Tumor suppressor gene Seq+ 83775 ChimerSeq TCGA FAWG TCGA_RNA-Seq HEATR6-MIEN1 HEATR6 chr17 60069711 - MIEN1 chr17 39730291 - Exonic hg38 BRCA TCGA-A8-A09I-01A 3 12 Out-of-frame Intra-chr q23.1 q12 Seq+ 83776 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP1-WIPF2 AKAP1 chr17 57085398 + WIPF2 chr17 40256391 + Exonic hg38 BRCA TCGA-A8-A09I-01A 4 6 5'UTR-5'UTR Intra-chr q22 q21.2 Seq+ 83777 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCK2-SFXN5 NCK2 chr2 105855289 + SFXN5 chr2 72971685 - Exonic hg38 BRCA TCGA-A8-A09I-01A 3 5 In-Frame Intra-chr q12.2 p13.2 Seq+ 83778 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX40-SCN4A DHX40 chr17 59602616 + SCN4A chr17 63947167 - Exonic hg38 BRCA TCGA-A8-A09I-01A 1 11 Out-of-frame Intra-chr q23.1 q23.3 83779 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP5-DLG2 LRP5 chr11 68390052 + DLG2 chr11 83965468 - Exonic hg38 BRCA TCGA-A8-A09I-01A 1 6 In-Frame Intra-chr q13.2 q14.1 Seq+ 83780 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRIP1-UTP18 BRIP1 chr17 61847101 - UTP18 chr17 51288029 + Exonic hg38 BRCA TCGA-A8-A09I-01A 1 2 Out-of-frame Intra-chr q23.2 Oncogene q21.33 83781 ChimerSeq TCGA FAWG TCGA_RNA-Seq FUT10-CSMD1 FUT10 chr8 33372644 - CSMD1 chr8 3097037 - Exonic hg38 BRCA TCGA-A8-A09K-01A 2 3 Out-of-frame Intra-chr p12 p23.2 Tumor suppressor gene 83782 ChimerSeq TCGA FAWG TCGA_RNA-Seq THSD4-THAP10 THSD4 chr15 71411823 + THAP10 chr15 70882908 - Exonic hg38 BRCA TCGA-A8-A09K-01A 1 1 In-Frame Intra-chr q23 q23 Transcription factor 83783 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIBCH-CTNNA2 HIBCH chr2 190310754 - CTNNA2 chr2 80393211 + Exonic hg38 BRCA TCGA-A8-A09M-01A 6 17 In-Frame Intra-chr q32.2 p12 Tumor suppressor gene Seq+ 83784 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOH-CHRNA9 RHOH chr4 40191338 + CHRNA9 chr4 40348882 + Exonic hg38 BRCA TCGA-A8-A09M-01A 2 3 5'UTR-CDS Intra-chr p14 Oncogene p14 83785 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRCP-DLG2 PRCP chr11 82900235 - DLG2 chr11 83786792 - Exonic hg38 BRCA TCGA-A8-A09N-01A 3 63 In-Frame Intra-chr q14.1 q14.1 Seq+ 83786 ChimerSeq TCGA FAWG TCGA_RNA-Seq NELFA-POLN NELFA chr4 2008750 - POLN chr4 2208487 - Exonic hg38 BRCA TCGA-A8-A09N-01A 5 43 In-Frame Intra-chr p16.3 p16.3 Seq+ 83787 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIST1H2AC-SLC17A4 HIST1H2AC chr6 26124749 + SLC17A4 chr6 25777926 + Exonic hg38 BRCA TCGA-A8-A09N-01A 2 30 3'UTR-CDS Intra-chr p22.2 p22.2 Seq+ 83788 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3C2B-LRRN2 PIK3C2B chr1 204464012 - LRRN2 chr1 204620218 - Exonic hg38 BRCA TCGA-A8-A09N-01A 1 16 CDS-5'UTR Intra-chr q32.1 Oncogene q32.1 83789 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H3-YY1 ZC3H3 chr8 143475398 - YY1 chr14 100262304 + Exonic hg38 BRCA TCGA-A8-A09N-01A 2 12 5'UTR-CDS Inter-chr q32.2 Transcription factor Seq+ 83790 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R13B-PPP1R16A PPP1R13B chr14 103797371 - PPP1R16A chr8 144490034 + Exonic hg38 BRCA TCGA-A8-A09N-01A 3 4 CDS-5'UTR Inter-chr q32.33 q24.3 83791 ChimerSeq TCGA FAWG TCGA_RNA-Seq LARP7-ALPK1 LARP7 chr4 112637603 + ALPK1 chr4 112411827 + Exonic hg38 BRCA TCGA-A8-A09N-01A 3 2 5'UTR-CDS Intra-chr q25 q25 Seq+ 83792 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM35A-BMPR1A FAM35A chr10 87152879 + BMPR1A chr10 86890062 + Exonic hg38 BRCA TCGA-A8-A09N-01A 2 5 Out-of-frame Intra-chr q23.2 q23.2 TKL:STKR Oncogene Tumor suppressor gene Seq+ 83793 ChimerSeq TCGA FAWG TCGA_RNA-Seq NVL-NEK2 NVL chr1 224250212 - NEK2 chr1 211674513 - Exonic hg38 BRCA TCGA-A8-A09Q-01A 35 67 In-Frame Intra-chr q42.11 q32.3 Other:NEK Seq+ 83794 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAI1-IGF2BP1 RAI1 chr17 17724159 + IGF2BP1 chr17 48999109 + Exonic hg38 BRCA TCGA-A8-A09Q-01A 20 87 5'UTR-CDS Intra-chr p11.2 q21.32 Seq+ 83795 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC5L-PITPNC1 CDC5L chr6 44429910 + PITPNC1 chr17 67532802 + Exonic hg38 BRCA TCGA-A8-A09Q-01A 14 81 3'UTR-CDS Inter-chr p21.1 Transcription factor q24.2 Seq+ 83796 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOH-N4BP2 RHOH chr4 40197300 + N4BP2 chr4 40097227 + Exonic hg38 BRCA TCGA-A8-A09Q-01A 20 41 5'UTR-5'UTR Intra-chr p14 Oncogene p14 Seq+ 83797 ChimerSeq TCGA FAWG TCGA_RNA-Seq WRB-NLK WRB chr21 39380486 + NLK chr17 28163543 + Exonic hg38 BRCA TCGA-A8-A09Q-01A 12 34 Out-of-frame Inter-chr q22.2 q11.2 CMGC:MAPK Seq+ 83798 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGPAT3-KSR1 AGPAT3 chr21 43904019 + KSR1 chr17 27588475 + Exonic hg38 BRCA TCGA-A8-A09Q-01A 13 24 5'UTR-CDS Inter-chr q22.3 q11.2 TKL:RAF Seq+ 83799 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KA6-HDX RPS6KA6 chrX 84186061 - HDX chrX 84333842 - Exonic hg38 BRCA TCGA-A8-A09Q-01A 12 20 In-Frame Intra-chr q21.1 Tumor suppressor gene q21.1 Transcription factor Seq+ 83800 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHFR-OSBPL8 CHFR chr12 132887196 - OSBPL8 chr12 76487618 - Exonic hg38 BRCA TCGA-A8-A09Q-01A 13 12 CDS-5'UTR Intra-chr q24.33 Tumor suppressor gene q21.2 Seq+ 83801 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFS1-2 NDUFS1 chr2 206127797 - 2 chr21 30598896 - Exonic hg38 BRCA TCGA-A8-A09Q-01A 9 16 5'UTR-5'UTR Inter-chr 83802 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAU2-MSI2 STAU2 chr8 73738284 - MSI2 chr17 57257098 + Exonic hg38 BRCA TCGA-A8-A09Q-01A 8 18 Out-of-frame Inter-chr q21.11 q22 Seq+ 83803 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLA1-MAP3K15 POLA1 chrX 24888122 + MAP3K15 chrX 19409973 - Exonic hg38 BRCA TCGA-A8-A09Q-01A 6 21 In-Frame Intra-chr p22.11 p22.12 Seq+ 83804 ChimerSeq TCGA FAWG TCGA_RNA-Seq REV3L-SOBP REV3L chr6 111405470 - SOBP chr6 107533459 + Exonic hg38 BRCA TCGA-A8-A09Q-01A 9 8 In-Frame Intra-chr q21 q21 Seq+ 83805 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSBN1L-SHANK2 RSBN1L chr7 77750064 + SHANK2 chr11 70473439 - Exonic hg38 BRCA TCGA-A8-A09Q-01A 8 12 Out-of-frame Inter-chr q11.23 q13.4 Seq+ 83806 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEMT-B4GALNT2 PEMT chr17 17522280 - B4GALNT2 chr17 49141247 + Exonic hg38 BRCA TCGA-A8-A09Q-01A 4 26 In-Frame Intra-chr p11.2 q21.32 Seq+ 83807 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPM-CERS4 HNRNPM chr19 8445111 + CERS4 chr19 8251076 + Exonic hg38 BRCA TCGA-A8-A09Q-01A 5 19 5'UTR-5'UTR Intra-chr p13.2 p13.2 Seq+ 83808 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL6ST-DHX29 IL6ST chr5 55947493 - DHX29 chr5 55269637 - Exonic hg38 BRCA TCGA-A8-A09Q-01A 2 26 Out-of-frame Intra-chr q11.2 Oncogene q11.2 Seq+ 83809 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP3CB-CAMK2G PPP3CB chr10 73444725 - CAMK2G chr10 73860889 - Exonic hg38 BRCA TCGA-A8-A09Q-01A 6 4 In-Frame Intra-chr q22.2 q22.2 Seq+ 83810 ChimerSeq TCGA FAWG TCGA_RNA-Seq HEATR6-GALNT13 HEATR6 chr17 60078696 - GALNT13 chr2 154450411 + Exonic hg38 BRCA TCGA-A8-A09Q-01A 5 6 In-Frame Inter-chr q23.1 q23.3 Seq+ 83811 ChimerSeq TCGA FAWG TCGA_RNA-Seq EVA1C-CEP112 EVA1C chr21 32467848 + CEP112 chr17 65927689 - Exonic hg38 BRCA TCGA-A8-A09Q-01A 2 16 Out-of-frame Inter-chr q22.11 q24.1 83812 ChimerSeq TCGA FAWG TCGA_RNA-Seq HEATR6-FGF10 HEATR6 chr17 60055515 - FGF10 chr5 44310530 - Exonic hg38 BRCA TCGA-A8-A09Q-01A 4 6 Out-of-frame Inter-chr q23.1 p12 Seq+ 83813 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARSG-CEP112 ARSG chr17 68307711 + CEP112 chr17 66096632 - Exonic hg38 BRCA TCGA-A8-A09Q-01A 3 9 Out-of-frame Intra-chr q24.2 q24.1 Seq+ 83814 ChimerSeq TCGA FAWG TCGA_RNA-Seq LARP4-PTPRM LARP4 chr12 50429090 + PTPRM chr18 8244058 + Exonic hg38 BRCA TCGA-A8-A09Q-01A 4 4 Out-of-frame Inter-chr q13.12 p11.23 Seq+ 83815 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREB1-FASTKD2 CREB1 chr2 207570321 + FASTKD2 chr2 206786733 + Exonic hg38 BRCA TCGA-A8-A09Q-01A 3 6 Out-of-frame Intra-chr q33.3 Oncogene Transcription factor q33.3 Seq+ 83816 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYTH3-MAD1L1 CYTH3 chr7 6171202 - MAD1L1 chr7 1898390 - Exonic hg38 BRCA TCGA-A8-A09Q-01A 2 9 In-Frame Intra-chr p22.1 p22.3 Tumor suppressor gene Seq+ 83817 ChimerSeq TCGA FAWG TCGA_RNA-Seq NVL-GPKOW NVL chr1 224250212 - GPKOW chrX 49123755 - Exonic hg38 BRCA TCGA-A8-A09Q-01A 3 5 CDS-5'UTR Inter-chr q42.11 p11.23 83818 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITSN1-WRB ITSN1 chr21 33642713 + WRB chr21 39391769 + Exonic hg38 BRCA TCGA-A8-A09Q-01A 3 2 Out-of-frame Intra-chr q22.11 q22.2 Seq+ 83819 ChimerSeq TCGA FAWG TCGA_RNA-Seq HELLS-TBC1D12 HELLS chr10 94588390 + TBC1D12 chr10 94521955 + Exonic hg38 BRCA TCGA-A8-A09Q-01A 2 5 In-Frame Intra-chr q23.33 q23.33 Seq+ 83820 ChimerSeq TCGA FAWG TCGA_RNA-Seq C21orf59-CLDN14 C21orf59 chr21 32603161 - CLDN14 chr21 36461776 - Exonic hg38 BRCA TCGA-A8-A09Q-01A 1 7 Out-of-frame Intra-chr q22.11 q22.13 83821 ChimerSeq TCGA FAWG TCGA_RNA-Seq NT5M-ZNF652 NT5M chr17 17306643 + ZNF652 chr17 49317983 - Exonic hg38 BRCA TCGA-A8-A09Q-01A 2 2 CDS-5'UTR Intra-chr p11.2 q21.33 Transcription factor Seq+ 83822 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOP3A-HEATR6 TOP3A chr17 18301885 - HEATR6 chr17 60073886 - Exonic hg38 BRCA TCGA-A8-A09Q-01A 1 6 5'UTR-CDS Intra-chr q23.1 Seq+ 83823 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEMT-IGF2BP1 PEMT chr17 17576920 - IGF2BP1 chr17 49041378 + Exonic hg38 BRCA TCGA-A8-A09Q-01A 1 4 Out-of-frame Intra-chr p11.2 q21.32 83824 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB21-KSR1 RAB21 chr12 71755288 + KSR1 chr17 27550568 + Exonic hg38 BRCA TCGA-A8-A09Q-01A 1 4 In-Frame Inter-chr q21.1 q11.2 TKL:RAF 83825 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC21B-SCN3A TTC21B chr2 165911327 - SCN3A chr2 165100424 - Exonic hg38 BRCA TCGA-A8-A09Q-01A 1 4 Out-of-frame Intra-chr q24.3 q24.3 83826 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIKFYVE-BPTF PIKFYVE chr2 208271691 + BPTF chr17 67928355 + Exonic hg38 BRCA TCGA-A8-A09Q-01A 1 3 Out-of-frame Inter-chr q34 q24.2 Transcription factor 83827 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL7-FAM134B FBXL7 chr5 15500713 + FAM134B chr5 16572102 - Exonic hg38 BRCA TCGA-A8-A09Q-01A 1 2 Out-of-frame Intra-chr p15.1 83828 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEG10-COL1A2 PEG10 chr7 94656580 + COL1A2 chr7 94400196 + Exonic hg38 BRCA TCGA-A8-A09R-01A 11 38 5'UTR-CDS Intra-chr q21.3 q21.3 Seq+ 83829 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLGAP5-L2HGDH DLGAP5 chr14 55191463 - L2HGDH chr14 50247253 - Exonic hg38 BRCA TCGA-A8-A09R-01A 5 5 5'UTR-CDS Intra-chr q22.3 q21.3 Seq+ 83830 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNTB-RAB15 FNTB chr14 64987097 + RAB15 chr14 64952571 - Exonic hg38 BRCA TCGA-A8-A09R-01A 2 9 Out-of-frame Intra-chr q23.3 q23.3 83831 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN9-PRR4 TSPAN9 chr12 3083719 + PRR4 chr12 10848407 - Exonic hg38 BRCA TCGA-A8-A09T-01A 2 13 5'UTR-5'UTR Intra-chr p13.33 Seq+ 83832 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCLK1-SERPINE3 DCLK1 chr13 36111869 - SERPINE3 chr13 51361278 + Exonic hg38 BRCA TCGA-A8-A09V-01A 3 16 Out-of-frame Intra-chr q13.3 CAMK:DCAMKL q14.3 Seq+ 83833 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX9-DAP SNX9 chr6 157902045 + DAP chr5 10683571 - Exonic hg38 BRCA TCGA-A8-A09X-01A 7 17 In-Frame Inter-chr q25.3 p15.2 Seq+ 83834 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAP-SNX9 DAP chr5 10748175 - SNX9 chr6 157906128 + Exonic hg38 BRCA TCGA-A8-A09X-01A 7 14 In-Frame Inter-chr p15.2 q25.3 Seq+ 83835 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHROOM3-FABP5 SHROOM3 chr4 76780646 + FABP5 chr8 81280536 + Exonic hg38 BRCA TCGA-A8-A09X-01A 5 10 3'UTR-5'UTR Inter-chr q21.1 q21.13 Seq+ 83836 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF13-CLDN16 RNF13 chr3 149921227 + CLDN16 chr3 190370893 + Exonic hg38 BRCA TCGA-A8-A09X-01A 1 4 CDS-5'UTR Intra-chr q25.1 q28 83837 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE4B-JAK1 PDE4B chr1 66332620 + JAK1 chr1 64886341 - Exonic hg38 BRCA TCGA-A8-A0A1-01A 1 5 CDS-5'UTR Intra-chr p31.3 p31.3 TK:JakA Oncogene Seq+ 83838 ChimerSeq TCGA FAWG TCGA_RNA-Seq RILPL1-SARNP RILPL1 chr12 123484180 - SARNP chr12 55757553 - Exonic hg38 BRCA TCGA-A8-A0A4-01A 4 12 Out-of-frame Intra-chr q24.31 q13.2 Seq+ 83839 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF451-NADSYN1 ZNF451 chr6 57128840 + NADSYN1 chr11 71463432 + Exonic hg38 BRCA TCGA-A8-A0A4-01A 1 10 Out-of-frame Inter-chr p12.1 Transcription factor q13.4 Seq+ 83840 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSKU-SFRP4 TSKU chr11 76783404 + SFRP4 chr7 37926774 - Exonic hg38 BRCA TCGA-A8-A0A4-01A 1 1 5'UTR-5'UTR Inter-chr q13.5 p14.1 Tumor suppressor gene Seq+ 83841 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS4-POLD3 INTS4 chr11 77978996 - POLD3 chr11 74668777 + Exonic hg38 BRCA TCGA-A8-A0A6-01A 5 47 CDS-3'UTR Intra-chr q14.1 q13.4 Seq+ 83842 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR3-MYEOV WDR3 chr1 117957196 + MYEOV chr11 69341510 + Exonic hg38 BRCA TCGA-A8-A0A6-01A 6 32 CDS-3'UTR Inter-chr p12 q13.3 83843 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC22A15-ANO1 SLC22A15 chr1 116037388 + ANO1 chr11 70149710 + Exonic hg38 BRCA TCGA-A8-A0A6-01A 7 21 In-Frame Inter-chr p13.1 q13.3 Seq+ 83844 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-KDM2A PPFIA1 chr11 70362488 + KDM2A chr11 67257484 + Exonic hg38 BRCA TCGA-A8-A0A6-01A 4 18 5'UTR-5'UTR Intra-chr q13.3 q13.2 Transcription factor Seq+ 83845 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAN1A2-VANGL1 MAN1A2 chr1 117442325 + VANGL1 chr1 115682364 + Exonic hg38 BRCA TCGA-A8-A0A6-01A 2 10 In-Frame Intra-chr p12 p13.1 Seq+ 83846 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC59-NUP107 LRRC59 chr17 50392398 - NUP107 chr12 68741813 + Exonic hg38 BRCA TCGA-A8-A0A7-01A 653 1151 In-Frame Inter-chr q21.33 q15 Seq+ 83847 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARA-CA10 RARA chr17 40318448 + CA10 chr17 52072393 - Exonic hg38 BRCA TCGA-A8-A0A7-01A 24 165 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 83848 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPSF6-OSBPL8 CPSF6 chr12 69239706 + OSBPL8 chr12 76487618 - Exonic hg38 BRCA TCGA-A8-A0A7-01A 3 8 CDS-5'UTR Intra-chr q15 q21.2 Seq+ 83849 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1X-WWC3 TBL1X chrX 9501849 + WWC3 chrX 10063445 + Exonic hg38 BRCA TCGA-A8-A0A7-01A 1 5 5'UTR-5'UTR Intra-chr p22.31 p22.2 83850 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL8-GSDMA OSBPL8 chr12 76559397 - GSDMA chr17 39965683 + Exonic hg38 BRCA TCGA-A8-A0A7-01A 1 3 5'UTR-5'UTR Inter-chr q21.2 q21.1 83851 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1H-SLC6A15 PPM1H chr12 62737502 - SLC6A15 chr12 84870670 - Exonic hg38 BRCA TCGA-A8-A0A9-01A 52 92 In-Frame Intra-chr q14.2 q21.31 Seq+ 83852 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP1-GAB2 SRGAP1 chr12 64087026 + GAB2 chr11 78280901 - Exonic hg38 BRCA TCGA-A8-A0A9-01A 15 110 Out-of-frame Inter-chr q14.2 q14.1 Seq+ 83853 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF121-PPP6R3 RNF121 chr11 71990717 + PPP6R3 chr11 68564303 + Exonic hg38 BRCA TCGA-A8-A0A9-01A 18 39 Out-of-frame Intra-chr q13.4 q13.2 Seq+ 83854 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARRB1-RASSF3 ARRB1 chr11 75281075 - RASSF3 chr12 64684787 + Exonic hg38 BRCA TCGA-A8-A0A9-01A 5 10 Out-of-frame Inter-chr q13.4 q14.2 Tumor suppressor gene Seq+ 83855 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNAP23-RGAG1 SNAP23 chr15 42495713 + RGAG1 chrX 110445123 + Exonic hg38 BRCA TCGA-A8-A0A9-01A 4 4 Out-of-frame Inter-chr q15.1 Seq+ 83856 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHCR7-USP15 DHCR7 chr11 71437812 - USP15 chr12 62383840 + Exonic hg38 BRCA TCGA-A8-A0A9-01A 1 1 In-Frame Inter-chr q13.4 q14.1 83857 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF167-PIGL RNF167 chr17 4941157 + PIGL chr17 16299888 + Exonic hg38 BRCA TCGA-A8-A0AB-01A 10 34 Out-of-frame Intra-chr p13.2 p11.2 Seq+ 83858 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF144B-LYRM4 RNF144B chr6 18399699 + LYRM4 chr6 5109491 - Exonic hg38 BRCA TCGA-A8-A0AD-01A 25 90 In-Frame Intra-chr p22.3 p25.1 Seq+ 83859 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPT-MARCH10 MAPT chr17 45962470 + 2019_ 3_ 10_ chr17 62788599 - Exonic hg38 BRCA TCGA-A8-A0AD-01A 36 26 Out-of-frame Intra-chr q23.2 Seq+ 83860 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN1-PCTP ATXN1 chr6 16485972 - PCTP chr17 55767335 + Exonic hg38 BRCA TCGA-A8-A0AD-01A 11 38 5'UTR-5'UTR Inter-chr p22.3 q22 Seq+ 83861 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD9-FARS2 BTBD9 chr6 38344984 - FARS2 chr6 5545180 + Exonic hg38 BRCA TCGA-A8-A0AD-01A 8 21 In-Frame Intra-chr p21.2 p25.1 Seq+ 83862 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM1B-PITPNC1 KDM1B chr6 18171479 + PITPNC1 chr17 67578186 + Exonic hg38 BRCA TCGA-A8-A0AD-01A 5 13 In-Frame Inter-chr p22.3 q24.2 Seq+ 83863 ChimerSeq TCGA FAWG TCGA_RNA-Seq C16orf45-POMT2 C16orf45 chr16 15434759 + POMT2 chr14 77306441 - Exonic hg38 BRCA TCGA-A8-A0AD-01A 4 15 Out-of-frame Inter-chr q24.3 Seq+ 83864 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED1-EYS MED1 chr17 39451038 - EYS chr6 65639892 - Exonic hg38 BRCA TCGA-A8-A0AD-01A 6 7 CDS-5'UTR Inter-chr q12 Tumor suppressor gene q12 Seq+ 83865 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLK4-ZNF354A CLK4 chr5 178608376 - ZNF354A chr5 178697695 - Exonic hg38 BRCA TCGA-A8-A0AD-01A 1 8 CDS-3'UTR Intra-chr q35.3 CMGC:CLK q35.3 Transcription factor 83866 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC42EP4-NEUROD2 CDC42EP4 chr17 73311893 - NEUROD2 chr17 39606604 - Exonic hg38 BRCA TCGA-A8-A0AD-01A 1 5 5'UTR-5'UTR Intra-chr q25.1 q12 Transcription factor Seq+ 83867 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASC15-RIT2 CASC15 chr6 22020542 + RIT2 chr18 42743720 - Exonic hg38 BRCA TCGA-AC-A23C-01A 266 771 5'UTR-CDS Inter-chr p22.3 q12.3 Seq+ 83868 ChimerSeq TCGA FAWG TCGA_RNA-Seq HCG25-TREM2 HCG25 chr6 33251706 + TREM2 chr6 41159066 - Exonic hg38 BRCA TCGA-AC-A23C-01A 44 183 3'UTR-CDS Intra-chr p21.1 83869 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB27B-PXDC1 RAB27B chr18 54828700 + PXDC1 chr6 3727662 - Exonic hg38 BRCA TCGA-AC-A23C-01A 18 45 5'UTR-CDS Inter-chr q21.2 p25.2 Seq+ 83870 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARIH2-SLC25A20 ARIH2 chr3 48918998 + SLC25A20 chr3 48892072 - Exonic hg38 BRCA TCGA-AC-A23C-01A 6 36 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 83871 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED1-CAP2 MED1 chr17 39439165 - CAP2 chr6 17539269 + Exonic hg38 BRCA TCGA-AC-A23C-01A 4 25 Out-of-frame Inter-chr q12 Tumor suppressor gene p22.3 Seq+ 83872 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM120B-MORN3 TMEM120B chr12 121712964 + MORN3 chr12 121659348 - Exonic hg38 BRCA TCGA-AC-A23C-01A 4 7 CDS-5'UTR Intra-chr q24.31 q24.31 83873 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK10-GAS8 CDK10 chr16 89682496 + GAS8 chr16 90031299 + Exonic hg38 BRCA TCGA-AC-A23C-01A 3 7 5'UTR-CDS Intra-chr q24.3 CMGC:CDK q24.3 83874 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF346-NSD1 ZNF346 chr5 177044533 + NSD1 chr5 177204120 + Exonic hg38 BRCA TCGA-AC-A23C-01A 1 7 In-Frame Intra-chr q35.2 Transcription factor q35.3 Oncogene 83875 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANSL1-ORMDL3 KANSL1 chr17 46067549 - ORMDL3 chr17 39924225 - Exonic hg38 BRCA TCGA-AC-A23H-01A 115 284 5'UTR-5'UTR Intra-chr q21.1 Seq+ 83876 ChimerSeq TCGA FAWG TCGA_RNA-Seq CKAP5-VMP1 CKAP5 chr11 46758923 - VMP1 chr17 59764971 + Exonic hg38 BRCA TCGA-AC-A23H-01A 62 114 In-Frame Inter-chr p11.2 q23.1 Seq+ 83877 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPA-NUP188 PTPA chr9 129129110 + NUP188 chr9 128968506 + Exonic hg38 BRCA TCGA-AC-A23H-01A 13 49 In-Frame Intra-chr q34.11 Tumor suppressor gene q34.11 83878 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP32-GPR137 USP32 chr17 60391882 - GPR137 chr11 64286510 + Exonic hg38 BRCA TCGA-AC-A23H-01A 5 27 Out-of-frame Inter-chr q23.2 q13.1 Seq+ 83879 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD7-UBR7 BTBD7 chr14 93263785 - UBR7 chr14 93222313 + Exonic hg38 BRCA TCGA-AC-A23H-01A 4 26 5'UTR-3'UTR Intra-chr Seq+ 83880 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSB-PTCHD3P2 SSB chr2 169808902 + PTCHD3P2 chr2 169767302 - Exonic hg38 BRCA TCGA-AC-A23H-01A 2 24 Out-of-frame Intra-chr q31.1 q31.1 83881 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBR7-BTBD7 UBR7 chr14 93220411 + BTBD7 chr14 93257355 - Exonic hg38 BRCA TCGA-AC-A23H-01A 3 13 3'UTR-5'UTR Intra-chr Seq+ 83882 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2I-CACNA1H UBE2I chr16 1309773 + CACNA1H chr16 1217919 + Exonic hg38 BRCA TCGA-AC-A23H-01A 2 6 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 83883 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-PRKCA SHANK2 chr11 71224697 - PRKCA chr17 66496201 + Exonic hg38 BRCA TCGA-AC-A23H-01A 2 5 5'UTR-CDS Inter-chr q13.4 q24.2 Seq+ 83884 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS10-MLLT1 ADAMTS10 chr19 8600928 - MLLT1 chr19 6270759 - Exonic hg38 BRCA TCGA-AC-A2B8-01A 10 34 In-Frame Intra-chr p13.2 p13.3 Seq+ 83885 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABTB2-TYRL ABTB2 chr11 34356701 - TYRL chr11 49415754 - Exonic hg38 BRCA TCGA-AC-A2BK-01A 20 166 Out-of-frame Intra-chr p13 p11.12 83886 ChimerSeq TCGA FAWG TCGA_RNA-Seq LONP1-ZNF780B LONP1 chr19 5707060 - ZNF780B chr19 40036626 - Exonic hg38 BRCA TCGA-AC-A2BK-01A 19 74 CDS-5'UTR Intra-chr p13.3 Transcription factor Seq+ 83887 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPRIN1-CAT CAPRIN1 chr11 34071987 + CAT chr11 34449192 + Exonic hg38 BRCA TCGA-AC-A2BK-01A 10 27 In-Frame Intra-chr p13 p13 Tumor suppressor gene Seq+ 83888 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIRLET7BHG-COL4A1 MIRLET7BHG chr22 46053920 + COL4A1 chr13 110242734 - Exonic hg38 BRCA TCGA-AC-A2BK-01A 6 23 5'UTR-CDS Inter-chr q13.31 q34 Seq+ 83889 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R2A-APP PPP2R2A chr8 26293740 + APP chr21 26112146 - Exonic hg38 BRCA TCGA-AC-A2BK-01A 2 5 Out-of-frame Inter-chr p21.2 q21.3 Seq+ 83890 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMSAP2-BCAR3 CAMSAP2 chr1 200815644 + BCAR3 chr1 93706142 - Exonic hg38 BRCA TCGA-AC-A2BK-01A 1 7 CDS-5'UTR Intra-chr q32.1 p22.1 83891 ChimerSeq TCGA FAWG TCGA_RNA-Seq DBNDD1-TPGS1 DBNDD1 chr16 90008784 - TPGS1 chr19 518889 + Exonic hg38 BRCA TCGA-AC-A2BK-01A 2 3 Out-of-frame Inter-chr q24.3 p13.3 Seq+ 83892 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBAP1-NFX1 UBAP1 chr9 34179240 + NFX1 chr9 33338510 + Exonic hg38 BRCA TCGA-AC-A2BK-01A 1 7 In-Frame Intra-chr p13.3 p13.3 Transcription factor 83893 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA9-CTDSPL ITGA9 chr3 37481607 + CTDSPL chr3 37947057 + Exonic hg38 BRCA TCGA-AC-A2BK-01A 1 6 In-Frame Intra-chr p22.2 Oncogene p22.2 Tumor suppressor gene 83894 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPF1-CHN1 WIPF1 chr2 174682774 - CHN1 chr2 174846957 - Exonic hg38 BRCA TCGA-AC-A2BK-01A 1 4 5'UTR-CDS Intra-chr q31.1 q31.1 83895 ChimerSeq TCGA FAWG TCGA_RNA-Seq THBS2-NME4 THBS2 chr6 169246197 - NME4 chr16 398990 + Exonic hg38 BRCA TCGA-AC-A2BK-01A 1 3 In-Frame Inter-chr q27 p13.3 Seq+ 83896 ChimerSeq TCGA FAWG TCGA_RNA-Seq TARBP1-RBM34 TARBP1 chr1 234425673 - RBM34 chr1 235148447 - Exonic hg38 BRCA TCGA-AC-A2BM-01A 13 74 In-Frame Intra-chr q42.2 q42.3 Seq+ 83897 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAGA-WBP2NL NAGA chr22 42062827 - WBP2NL chr22 42030720 + Exonic hg38 BRCA TCGA-AC-A2BM-01A 15 17 CDS-3'UTR Intra-chr q13.2 q13.2 Seq+ 83898 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAG4-ZMAT4 BAG4 chr8 38177139 + ZMAT4 chr8 40825680 - Exonic hg38 BRCA TCGA-AC-A2BM-01A 9 35 CDS-5'UTR Intra-chr p11.23 p11.21 Transcription factor Seq+ 83899 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGHMBP2-PITPNM1 IGHMBP2 chr11 68904930 + PITPNM1 chr11 67492177 - Exonic hg38 BRCA TCGA-AC-A2BM-01A 4 55 Out-of-frame Intra-chr q13.3 q13.2 Seq+ 83900 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL21-MYO1B MRPL21 chr11 68900535 - MYO1B chr2 191400382 + Exonic hg38 BRCA TCGA-AC-A2BM-01A 4 54 5'UTR-CDS Inter-chr q13.3 q32.3 Seq+ 83901 ChimerSeq TCGA FAWG TCGA_RNA-Seq VAV2-TMEM8C VAV2 chr9 133939103 - TMEM8C chr9 133520288 - Exonic hg38 BRCA TCGA-AC-A2BM-01A 7 16 Out-of-frame Intra-chr q34.2 q34.2 Seq+ 83902 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-UNC5D SHANK2 chr11 71075159 - UNC5D chr8 35683547 + Exonic hg38 BRCA TCGA-AC-A2BM-01A 4 20 In-Frame Inter-chr q13.4 p12 Tumor suppressor gene 83903 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS4-GAB2 INTS4 chr11 77978996 - GAB2 chr11 78280901 - Exonic hg38 BRCA TCGA-AC-A2BM-01A 2 21 In-Frame Intra-chr q14.1 q14.1 KB Seq+ 83904 ChimerSeq TCGA FAWG TCGA_RNA-Seq HHAT-SERTAD4 HHAT chr1 210404679 + SERTAD4 chr1 210237944 + Exonic hg38 BRCA TCGA-AC-A2BM-01A 3 10 3'UTR-3'UTR Intra-chr Seq+ 83905 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS13-LHX2 ADAMTS13 chr9 133449965 + LHX2 chr9 124032420 + Exonic hg38 BRCA TCGA-AC-A2BM-01A 3 4 3'UTR-CDS Intra-chr q33.3 Transcription factor Seq+ 83906 ChimerSeq TCGA FAWG TCGA_RNA-Seq HBP1-PIK3CG HBP1 chr7 107186472 + PIK3CG chr7 106905109 + Exonic hg38 BRCA TCGA-AC-A2BM-01A 1 4 3'UTR-CDS Intra-chr Tumor suppressor gene Transcription factor q22.3 Oncogene 83907 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K2-SHANK2 MAP3K2 chr2 127387452 - SHANK2 chr11 71119032 - Exonic hg38 BRCA TCGA-AC-A2BM-01A 1 4 5'UTR-CDS Inter-chr q14.3 STE:STE11 q13.4 Seq+ 83908 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHMT1-TSC1 EHMT1 chr9 137818138 + TSC1 chr9 132928952 - Exonic hg38 BRCA TCGA-AC-A2BM-01A 1 2 CDS-5'UTR Intra-chr q34.3 q34.13 Oncogene Tumor suppressor gene 83909 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIP4K2B-SHANK2 PIP4K2B chr17 38777687 - SHANK2 chr11 70896567 - Exonic hg38 BRCA TCGA-AC-A2FB-01A 53 126 5'UTR-CDS Inter-chr q12 q13.4 Seq+ 83910 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANSL1-LAYN KANSL1 chr17 46050533 - LAYN chr11 111543923 + Exonic hg38 BRCA TCGA-AC-A2FB-01A 53 87 5'UTR-5'UTR Inter-chr q23.1 Seq+ 83911 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARA-CDK12 RARA chr17 40318448 + CDK12 chr17 39544249 + Exonic hg38 BRCA TCGA-AC-A2FB-01A 5 50 5'UTR-3'UTR Intra-chr q21.2 Oncogene Transcription factor q12 Oncogene Seq+ 83912 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSH2-ANO1 SSH2 chr17 29929938 - ANO1 chr11 70111707 + Exonic hg38 BRCA TCGA-AC-A2FB-01A 6 35 Out-of-frame Inter-chr q11.2 q13.3 Seq+ 83913 ChimerSeq TCGA FAWG TCGA_RNA-Seq DBF4B-DYNC2H1 DBF4B chr17 44709366 + DYNC2H1 chr11 103165898 + Exonic hg38 BRCA TCGA-AC-A2FB-01A 6 6 Out-of-frame Inter-chr q21.31 q22.3 Seq+ 83914 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIP4K2B-SLC6A4 PIP4K2B chr17 38786823 - SLC6A4 chr17 30222915 - Exonic hg38 BRCA TCGA-AC-A2FB-01A 3 11 5'UTR-5'UTR Intra-chr q12 q11.2 Seq+ 83915 ChimerSeq TCGA FAWG TCGA_RNA-Seq THRA-GOSR1 THRA chr17 40076938 + GOSR1 chr17 30490126 + Exonic hg38 BRCA TCGA-AC-A2FB-01A 2 6 Out-of-frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q11.2 Seq+ 83916 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGAP3-BPTF PGAP3 chr17 39685922 - BPTF chr17 67982252 + Exonic hg38 BRCA TCGA-AC-A2FB-01A 2 5 Out-of-frame Intra-chr q12 Oncogene q24.2 Transcription factor Seq+ 83917 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGAP3-IFI35 PGAP3 chr17 39684597 - IFI35 chr17 43012179 + Exonic hg38 BRCA TCGA-AC-A2FB-01A 1 7 In-Frame Intra-chr q12 Oncogene q21.31 83918 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-AHNAK SHANK2 chr11 71056481 - AHNAK chr11 62433891 - Exonic hg38 BRCA TCGA-AC-A2FE-01A 216 529 Out-of-frame Intra-chr q13.4 q12.3 Tumor suppressor gene 83919 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR70-GHR WDR70 chr5 37396570 + GHR chr5 42688890 + Exonic hg38 BRCA TCGA-AC-A2FE-01A 1 9 Out-of-frame Intra-chr p13.2 p13.1 83920 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFE2L1-ENG NFE2L1 chr17 48057502 + ENG chr9 127820037 - Exonic hg38 BRCA TCGA-AC-A2FF-01A 10 30 In-Frame Inter-chr q21.32 Transcription factor q34.11 Seq+ 83921 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANSL1-OSBPL7 KANSL1 chr17 46223671 - OSBPL7 chr17 47813403 - Exonic hg38 BRCA TCGA-AC-A2FF-01A 2 27 5'UTR-CDS Intra-chr q21.32 83922 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-LRSAM1 FBXL20 chr17 39402173 - LRSAM1 chr9 127495964 + Exonic hg38 BRCA TCGA-AC-A2FF-01A 2 21 In-Frame Inter-chr q12 q33.3 Seq+ 83923 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBX3-NSF PBX3 chr9 125748623 + NSF chr17 46674414 + Exonic hg38 BRCA TCGA-AC-A2FF-01A 1 17 CDS-3'UTR Inter-chr q33.3 Transcription factor 83924 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMCC1-ALDH1L1 TMCC1 chr3 129827803 - ALDH1L1 chr3 126161002 - Exonic hg38 BRCA TCGA-AC-A2FF-01A 1 6 Out-of-frame Intra-chr q22.1 q21.3 Seq+ 83925 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF274-CACNA2D4 ZNF274 chr19 58210073 + CACNA2D4 chr12 1887069 - Exonic hg38 BRCA TCGA-AC-A2FM-01A 15 60 CDS-5'UTR Inter-chr q13.43 Transcription factor p13.33 Seq+ 83926 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRL1-PODNL1 ADGRL1 chr19 14205985 - PODNL1 chr19 13938006 - Exonic hg38 BRCA TCGA-AC-A2FM-01A 10 54 5'UTR-CDS Intra-chr p13.12 p13.12 83927 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF536-FPR2 ZNF536 chr19 30284141 + FPR2 chr19 51768645 + Exonic hg38 BRCA TCGA-AC-A2FM-01A 4 49 5'UTR-5'UTR Intra-chr q12 Transcription factor q13.41 83928 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-LILRB2 SHANK2 chr11 71224697 - LILRB2 chr19 54281077 - Exonic hg38 BRCA TCGA-AC-A2FM-01A 11 14 5'UTR-5'UTR Inter-chr q13.4 83929 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPM4-LRRC25 TPM4 chr19 16082046 + LRRC25 chr19 18392125 - Exonic hg38 BRCA TCGA-AC-A2FM-01A 4 10 In-Frame Intra-chr p13.12 p13.11 Seq+ 83930 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC35E1-CYP4F22 SLC35E1 chr19 16566532 - CYP4F22 chr19 15523693 + Exonic hg38 BRCA TCGA-AC-A2FM-01A 3 13 CDS-5'UTR Intra-chr p13.11 p13.12 Seq+ 83931 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS15L1-BRD4 EPS15L1 chr19 16434365 - BRD4 chr19 15273133 - Exonic hg38 BRCA TCGA-AC-A2FM-01A 1 15 CDS-5'UTR Intra-chr p13.11 p13.12 Atypical:BRD Seq+ 83932 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO42-RUNX1 FBXO42 chr1 16352255 - RUNX1 chr21 34799462 - Exonic hg38 BRCA TCGA-AC-A2FO-01A 12 12 5'UTR-CDS Inter-chr p36.13 q22.12 Oncogene Tumor suppressor gene Transcription factor Seq+ 83933 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHM2-ZSWIM5 PLEKHM2 chr1 15684618 + ZSWIM5 chr1 45088237 - Exonic hg38 BRCA TCGA-AC-A2FO-01A 6 14 Out-of-frame Intra-chr p36.21 p34.1 Seq+ 83934 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC19-TOM1L2 TTC19 chr17 16026702 + TOM1L2 chr17 17893810 - Exonic hg38 BRCA TCGA-AC-A2FO-01A 3 7 Out-of-frame Intra-chr p12 p11.2 Tumor suppressor gene Seq+ 83935 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2G1-SLC25A11 UBE2G1 chr17 4366271 - SLC25A11 chr17 4939212 - Exonic hg38 BRCA TCGA-AC-A2FO-01A 1 12 Out-of-frame Intra-chr p13.2 p13.2 83936 ChimerSeq TCGA FAWG TCGA_RNA-Seq SREBF1-DRC3 SREBF1 chr17 17836727 - DRC3 chr17 17973852 + Exonic hg38 BRCA TCGA-AC-A2QH-01A 5 12 CDS-5'UTR Intra-chr p11.2 Transcription factor p11.2 83937 ChimerSeq TCGA FAWG TCGA_RNA-Seq COG5-FOXP2 COG5 chr7 107527237 - FOXP2 chr7 114689782 + Exonic hg38 BRCA TCGA-AC-A2QH-01A 5 4 5'UTR-5'UTR Intra-chr q31.1 Transcription factor Seq+ 83938 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM6A-NDUFB11 KDM6A chrX 44873987 + NDUFB11 chrX 47142744 - Exonic hg38 BRCA TCGA-AC-A2QJ-01A 1 5 In-Frame Intra-chr p11.3 Oncogene Tumor suppressor gene p11.3 83939 ChimerSeq TCGA FAWG TCGA_RNA-Seq MFSD10-ATAD3B MFSD10 chr4 2931825 - ATAD3B chr1 1490257 + Exonic hg38 BRCA TCGA-AC-A2QJ-01A 2 1 In-Frame Inter-chr p16.3 p36.33 Seq+ 83940 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPF-ATAD1 HNRNPF chr10 43409131 - ATAD1 chr10 87814612 - Exonic hg38 BRCA TCGA-AC-A3EH-01A 21 23 5'UTR-5'UTR Intra-chr q11.21 Seq+ 83941 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2Q2-NRG4 UBE2Q2 chr15 75891014 + NRG4 chr15 75943654 - Exonic hg38 BRCA TCGA-AC-A3EH-01A 10 22 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 83942 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOR2-ITGB5 NCOR2 chr12 124518140 - ITGB5 chr3 124809156 - Exonic hg38 BRCA TCGA-AC-A3EH-01A 5 33 5'UTR-CDS Inter-chr q24.31 q21.2 Seq+ 83943 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIAM1-FBLIM1 TIAM1 chr21 31339243 - FBLIM1 chr1 15784548 + Exonic hg38 BRCA TCGA-AC-A3OD-01A 25 78 5'UTR-CDS Inter-chr q22.11 p36.21 Seq+ 83944 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEU3-NDUFV1 NEU3 chr11 74989154 + NDUFV1 chr11 67608400 + Exonic hg38 BRCA TCGA-AC-A3OD-01A 9 133 Out-of-frame Intra-chr q13.4 q13.2 Seq+ 83945 ChimerSeq TCGA FAWG TCGA_RNA-Seq THOC7-LRIG1 THOC7 chr3 63863772 - LRIG1 chr3 66462509 - Exonic hg38 BRCA TCGA-AC-A3OD-01A 20 8 5'UTR-5'UTR Intra-chr p14.1 Tumor suppressor gene Seq+ 83946 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHKA-XRRA1 CHKA chr11 68120828 - XRRA1 chr11 74930372 - Exonic hg38 BRCA TCGA-AC-A3OD-01A 3 8 Out-of-frame Intra-chr q13.2 q13.4 Seq+ 83947 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNFAIP1-AATF TNFAIP1 chr17 28335856 + AATF chr17 36986617 + Exonic hg38 BRCA TCGA-AC-A3QQ-01A 4 9 5'UTR-3'UTR Intra-chr q11.2 Seq+ 83948 ChimerSeq TCGA FAWG TCGA_RNA-Seq P4HTM-MEIOB P4HTM chr3 48990914 + MEIOB chr16 1834366 - Exonic hg38 BRCA TCGA-AC-A3TM-01A 3 13 Out-of-frame Inter-chr p21.31 Seq+ 83949 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCB8-NOS3 ABCB8 chr7 151028610 + NOS3 chr7 151008930 + Exonic hg38 BRCA TCGA-AC-A3TN-01A 5 40 In-Frame Intra-chr q36.1 q36.1 Seq+ 83950 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASB17-IGKJ1 ASB17 chr1 75922186 - IGKJ1 chr2 88861915 - Exonic hg38 BRCA TCGA-AC-A3W5-01A 9 0 Out-of-frame Inter-chr p31.1 p11.2 83951 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR3F-DTD1 POLR3F chr20 18473458 + DTD1 chr20 18744100 + Exonic hg38 BRCA TCGA-AC-A3W5-01A 1 8 Out-of-frame Intra-chr p11.23 p11.23 83952 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1D-TMIGD1 MYO1D chr17 32876778 - TMIGD1 chr17 30329529 - Exonic hg38 BRCA TCGA-AC-A3W5-01A 1 4 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 83953 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDOA-COL1A1 ALDOA chr16 30065927 + COL1A1 chr17 50195330 - Exonic hg38 BRCA TCGA-AC-A3W7-01A 1 5 5'UTR-CDS Inter-chr p11.2 q21.33 Oncogene Seq+ 83954 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF185-ISX RNF185 chr22 31160303 + ISX chr22 35082518 + Exonic hg38 BRCA TCGA-AC-A3YI-01A 3 23 5'UTR-CDS Intra-chr q12.2 q12.3 Transcription factor Seq+ 83955 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACROD1-PITPNM1 MACROD1 chr11 64151239 - PITPNM1 chr11 67502086 - Exonic hg38 BRCA TCGA-AC-A4ZE-01A 54 231 In-Frame Intra-chr q13.1 q13.2 Seq+ 83956 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDH3B2-TENM4 ALDH3B2 chr11 67674436 - TENM4 chr11 78722917 - Exonic hg38 BRCA TCGA-AC-A4ZE-01A 15 40 5'UTR-CDS Intra-chr q13.2 q14.1 Seq+ 83957 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-OTUB1 UVRAG chr11 75912039 + OTUB1 chr11 63996530 + Exonic hg38 BRCA TCGA-AC-A4ZE-01A 15 31 Out-of-frame Intra-chr q13.5 Tumor suppressor gene q13.1 Seq+ 83958 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-SPTBN2 SHANK2 chr11 70668439 - SPTBN2 chr11 66688209 - Exonic hg38 BRCA TCGA-AC-A4ZE-01A 8 40 Out-of-frame Intra-chr q13.4 q13.2 Seq+ 83959 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-RBM4B SHANK2 chr11 70698688 - RBM4B chr11 66665578 - Exonic hg38 BRCA TCGA-AC-A4ZE-01A 1 10 Out-of-frame Intra-chr q13.4 q13.2 Seq+ 83960 ChimerSeq TCGA FAWG TCGA_RNA-Seq AIP-POLD4 AIP chr11 67490457 + POLD4 chr11 67353077 - Exonic hg38 BRCA TCGA-AC-A4ZE-01A 1 3 In-Frame Intra-chr q13.2 Tumor suppressor gene q13.2 83961 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP1M1-RAB8A AP1M1 chr19 16209177 + RAB8A chr19 16125470 + Exonic hg38 BRCA TCGA-AC-A5EH-01A 8 18 In-Frame Intra-chr p13.11 p13.11 Seq+ 83962 ChimerSeq TCGA FAWG TCGA_RNA-Seq WASH3P-ACSF2 WASH3P chr15 101966223 + ACSF2 chr17 50460677 + Exonic hg38 BRCA TCGA-AC-A5EH-01A 2 18 5'UTR-5'UTR Inter-chr q26.3 q21.33 83963 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEA1-TMCC3 EEA1 chr12 92891629 - TMCC3 chr12 94582538 - Exonic hg38 BRCA TCGA-AC-A5EH-01A 2 10 In-Frame Intra-chr q22 Transcription factor q22 Seq+ 83964 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMA5-EIF2S2P5 PSMA5 chr1 109401346 - EIF2S2P5 chr1 114468973 + Exonic hg38 BRCA TCGA-AC-A5XS-01A 3 21 Out-of-frame Intra-chr p13.3 p13.2 83965 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR1C-MDGA1 POLR1C chr6 43519838 + MDGA1 chr6 37664106 - Exonic hg38 BRCA TCGA-AC-A5XS-01A 3 11 In-Frame Intra-chr p21.1 p21.2 Seq+ 83966 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF461-MATN2 ZNF461 chr19 36664698 - MATN2 chr8 97888075 + Exonic hg38 BRCA TCGA-AC-A5XU-01A 27 166 5'UTR-5'UTR Inter-chr q13.12 Transcription factor q22.1 Seq+ 83967 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUZ12P1-BLVRB SUZ12P1 chr17 30709811 + BLVRB chr19 40458545 - Exonic hg38 BRCA TCGA-AC-A5XU-01A 21 97 5'UTR-CDS Inter-chr q11.2 q13.2 Seq+ 83968 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPS1-C19orf66 TRPS1 chr8 115587001 - C19orf66 chr19 10089657 + Exonic hg38 BRCA TCGA-AC-A5XU-01A 24 81 Out-of-frame Inter-chr q23.3 Transcription factor p13.2 Seq+ 83969 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF2-ALDH16A1 TAF2 chr8 119831677 - ALDH16A1 chr19 49463854 + Exonic hg38 BRCA TCGA-AC-A5XU-01A 8 69 In-Frame Inter-chr q24.12 q13.33 Seq+ 83970 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF584-LAIR1 ZNF584 chr19 58401662 + LAIR1 chr19 54364330 - Exonic hg38 BRCA TCGA-AC-A5XU-01A 6 48 5'UTR-5'UTR Intra-chr q13.43 Transcription factor 83971 ChimerSeq TCGA FAWG TCGA_RNA-Seq HPN-1042C11.5 HPN chr19 35049516 + 1042C11.5 chr8 102683580 + Exonic hg38 BRCA TCGA-AC-A5XU-01A 6 31 Out-of-frame Inter-chr q13.11 83972 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D16-ZNF573 TBC1D16 chr17 79951450 - ZNF573 chr19 37817220 - Exonic hg38 BRCA TCGA-AC-A5XU-01A 5 13 CDS-5'UTR Inter-chr q25.3 q13.13 Transcription factor 83973 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATAD2A-PRKACA GATAD2A chr19 19386138 + PRKACA chr19 14093792 - Exonic hg38 BRCA TCGA-AC-A5XU-01A 2 20 5'UTR-CDS Intra-chr p13.11 Transcription factor p13.12 Seq+ 83974 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF415-EIF3H ZNF415 chr19 53115704 - EIF3H chr8 116658980 - Exonic hg38 BRCA TCGA-AC-A5XU-01A 2 20 In-Frame Inter-chr q13.42 Transcription factor q24.11 Seq+ 83975 ChimerSeq TCGA FAWG TCGA_RNA-Seq CERS4-SPAG17 CERS4 chr19 8210862 + SPAG17 chr1 118008198 - Exonic hg38 BRCA TCGA-AC-A5XU-01A 1 22 5'UTR-CDS Inter-chr p13.2 p12 Seq+ 83976 ChimerSeq TCGA FAWG TCGA_RNA-Seq BPTF-ARSG BPTF chr17 67948306 + ARSG chr17 68343604 + Exonic hg38 BRCA TCGA-AC-A5XU-01A 3 9 Out-of-frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 83977 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARSG-PRKCA ARSG chr17 68356804 + PRKCA chr17 66496201 + Exonic hg38 BRCA TCGA-AC-A5XU-01A 3 5 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 83978 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC42EP5-CYTH1 CDC42EP5 chr19 54471545 - CYTH1 chr17 78709732 - Exonic hg38 BRCA TCGA-AC-A5XU-01A 2 6 5'UTR-5'UTR Inter-chr q25.3 Seq+ 83979 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCA-CDH8 PRKCA chr17 66689047 + CDH8 chr16 61901473 - Exonic hg38 BRCA TCGA-AC-A5XU-01A 2 4 In-Frame Inter-chr q24.2 q21 Seq+ 83980 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPS1-LRP12 TRPS1 chr8 115587001 - LRP12 chr8 104509074 - Exonic hg38 BRCA TCGA-AC-A5XU-01A 1 7 Out-of-frame Intra-chr q23.3 Transcription factor q22.3 83981 ChimerSeq TCGA FAWG TCGA_RNA-Seq HEATR6-USP32 HEATR6 chr17 60078696 - USP32 chr17 60422405 - Exonic hg38 BRCA TCGA-AC-A62V-01A 68 446 CDS-5'UTR Intra-chr q23.1 q23.2 83982 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLK2-DCAF7 TLK2 chr17 62608148 + DCAF7 chr17 63578470 + Exonic hg38 BRCA TCGA-AC-A62V-01A 39 74 In-Frame Intra-chr q23.2 Other:TLK q23.3 Seq+ 83983 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM39-VMP1 RBM39 chr20 35721740 - VMP1 chr17 59764971 + Exonic hg38 BRCA TCGA-AC-A62V-01A 33 69 In-Frame Inter-chr q11.22 q23.1 Seq+ 83984 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPD-ZFAS1 CPD chr17 30385236 + ZFAS1 chr20 49295403 + Exonic hg38 BRCA TCGA-AC-A62V-01A 9 147 CDS-3'UTR Inter-chr q11.2 Tumor suppressor gene q13.13 Tumor suppressor gene 83985 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGU-BCAS3 PIGU chr20 34644164 - BCAS3 chr17 61368327 + Exonic hg38 BRCA TCGA-AC-A62V-01A 19 61 Out-of-frame Inter-chr q11.22 q23.2 Seq+ 83986 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLK2-CD244 CLK2 chr1 155269488 - CD244 chr1 160839049 - Exonic hg38 BRCA TCGA-AC-A62V-01A 10 40 5'UTR-CDS Intra-chr q22 CMGC:CLK q23.3 Seq+ 83987 ChimerSeq TCGA FAWG TCGA_RNA-Seq PMEPA1-RALY PMEPA1 chr20 57709474 - RALY chr20 34031522 + Exonic hg38 BRCA TCGA-AC-A62V-01A 7 37 CDS-5'UTR Intra-chr q13.31 q11.22 Seq+ 83988 ChimerSeq TCGA FAWG TCGA_RNA-Seq HEATR6-C17orf64 HEATR6 chr17 60076130 - C17orf64 chr17 60431181 + Exonic hg38 BRCA TCGA-AC-A62V-01A 3 42 Out-of-frame Intra-chr q23.1 q23.2 Seq+ 83989 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGU-PITPNC1 PIGU chr20 34644164 - PITPNC1 chr17 67532802 + Exonic hg38 BRCA TCGA-AC-A62V-01A 2 18 In-Frame Inter-chr q11.22 q24.2 Seq+ 83990 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH4-SLA2 CDH4 chr20 61873900 + SLA2 chr20 36634589 - Exonic hg38 BRCA TCGA-AC-A62V-01A 3 6 3'UTR-CDS Intra-chr q13.33 Tumor suppressor gene q11.23 Seq+ 83991 ChimerSeq TCGA FAWG TCGA_RNA-Seq HAP1-GAST HAP1 chr17 41731493 - GAST chr17 41715432 + Exonic hg38 BRCA TCGA-AC-A62V-01A 2 5 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 83992 ChimerSeq TCGA FAWG TCGA_RNA-Seq PMEPA1-TRPC4AP PMEPA1 chr20 57710460 - TRPC4AP chr20 35035308 - Exonic hg38 BRCA TCGA-AC-A62V-01A 1 8 In-Frame Intra-chr q13.31 q11.22 83993 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLGAP4-TUBD1 DLGAP4 chr20 36462599 + TUBD1 chr17 59863847 - Exonic hg38 BRCA TCGA-AC-A62V-01A 1 4 In-Frame Inter-chr q11.23 q23.1 Seq+ 83994 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP32-DHX40 USP32 chr17 60391883 - DHX40 chr17 59598736 + Exonic hg38 BRCA TCGA-AC-A62V-01A 1000 1000 Out-of-frame Intra-chr q23.2 q23.1 83995 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP32-TRPC4AP USP32 chr17 60226039 - TRPC4AP chr20 35069412 - Exonic hg38 BRCA TCGA-AC-A62V-01A 1000 1000 Out-of-frame Inter-chr q23.2 q11.22 83996 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOLPP1-SPTAN1 DOLPP1 chr9 129086798 + SPTAN1 chr9 128617640 + Exonic hg38 BRCA TCGA-AC-A62Y-01A 4 26 In-Frame Intra-chr q34.11 q34.11 Seq+ 83997 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF40-PLK1 RNF40 chr16 30772190 + PLK1 chr16 23687469 + Exonic hg38 BRCA TCGA-AC-A6IV-01A 11 17 Out-of-frame Intra-chr p11.2 p12.2 Other:PLK Tumor suppressor gene Seq+ 83998 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCA-IGF2BP1 PRKCA chr17 66306127 + IGF2BP1 chr17 49049352 + Exonic hg38 BRCA TCGA-AC-A6IV-01A 1 4 Out-of-frame Intra-chr q24.2 q21.32 Seq+ 83999 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDAH1-ZNHIT6 DDAH1 chr1 85464743 - ZNHIT6 chr1 85654098 - Exonic hg38 BRCA TCGA-AC-A6IW-01A 13 27 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 84000 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAP1GAP-NIT2 RAP1GAP chr1 21609575 - NIT2 chr3 100354772 + Exonic hg38 BRCA TCGA-AC-A6IW-01A 7 28 Out-of-frame Inter-chr p36.12 Tumor suppressor gene q12.2 Tumor suppressor gene Seq+ 84001 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP8-TMEM217 LRP8 chr1 53250690 - TMEM217 chr6 37219041 - Exonic hg38 BRCA TCGA-AC-A6IW-01A 10 10 CDS-5'UTR Inter-chr p32.3 p21.2 Seq+ 84002 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB2A-TRAPPC9 RAB2A chr8 60517253 + TRAPPC9 chr8 140024079 - Exonic hg38 BRCA TCGA-AC-A6IW-01A 3 22 Out-of-frame Intra-chr q12.1 q24.3 Seq+ 84003 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGO2-PCMTD1 AGO2 chr8 140585119 - PCMTD1 chr8 51833689 - Exonic hg38 BRCA TCGA-AC-A6IW-01A 6 8 In-Frame Intra-chr q24.3 q11.23 Seq+ 84004 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE3C-DNAJB6 UBE3C chr7 157139338 + DNAJB6 chr7 157382246 + Exonic hg38 BRCA TCGA-AC-A6IW-01A 5 11 Out-of-frame Intra-chr q36.3 q36.3 Seq+ 84005 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIAH2-CFAP97 SIAH2 chr3 150762433 - CFAP97 chr4 185164179 - Exonic hg38 BRCA TCGA-AC-A6IW-01A 5 7 In-Frame Inter-chr q25.1 q35.1 84006 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT10-IQCA1 GALNT10 chr5 154298079 + IQCA1 chr2 236380636 - Exonic hg38 BRCA TCGA-AC-A6IW-01A 2 14 Out-of-frame Inter-chr q33.2 q37.3 Seq+ 84007 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAD1-RAB2B DAD1 chr14 22588947 - RAB2B chr14 21468752 - Exonic hg38 BRCA TCGA-AC-A6IW-01A 4 5 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 84008 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H15-FAM171B ZC3H15 chr2 186486457 + FAM171B chr2 186740228 + Exonic hg38 BRCA TCGA-AC-A6IW-01A 2 8 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 84009 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALPL-FILIP1L ALPL chr1 21509517 + FILIP1L chr3 99830605 - Exonic hg38 BRCA TCGA-AC-A6IW-01A 2 7 5'UTR-3'UTR Inter-chr p36.12 Tumor suppressor gene q12.1 Seq+ 84010 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNB1-NADK GNB1 chr1 1890820 - NADK chr1 1757310 - Exonic hg38 BRCA TCGA-AC-A6IW-01A 2 6 5'UTR-CDS Intra-chr p36.33 p36.33 Seq+ 84011 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRWD1-ABCA10 BRWD1 chr21 39247701 - ABCA10 chr17 69187879 - Exonic hg38 BRCA TCGA-AC-A6IW-01A 2 3 Out-of-frame Inter-chr q22.2 q24.3 Seq+ 84012 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPS1-PAFAH1B1 TRPS1 chr8 115668545 - PAFAH1B1 chr17 2638099 + Exonic hg38 BRCA TCGA-AC-A6IW-01A 1 3 5'UTR-5'UTR Inter-chr q23.3 Transcription factor p13.3 Tumor suppressor gene 84013 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFB9-TDRKH NDUFB9 chr8 124539287 + TDRKH chr1 151783049 - Exonic hg38 BRCA TCGA-AC-A6IX-01A 112 354 5'UTR-5'UTR Inter-chr q24.13 q21.3 Seq+ 84014 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP12-LAPTM4B LRP12 chr8 104588819 - LAPTM4B chr8 97851397 + Exonic hg38 BRCA TCGA-AC-A6IX-01A 17 52 Out-of-frame Intra-chr q22.3 q22.1 Seq+ 84015 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOP3A-TEKT1 TOP3A chr17 18314599 - TEKT1 chr17 6815962 - Exonic hg38 BRCA TCGA-AC-A6IX-01A 3 15 5'UTR-CDS Intra-chr p13.1 Seq+ 84016 ChimerSeq TCGA FAWG TCGA_RNA-Seq OXR1-CSMD3 OXR1 chr8 106713985 + CSMD3 chr8 113314793 - Exonic hg38 BRCA TCGA-AC-A6IX-01A 1 15 Out-of-frame Intra-chr q23.1 q23.3 Oncogene Seq+ 84017 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP4Z2P-SPATA6 CYP4Z2P chr1 46898843 - SPATA6 chr1 48453131 - Exonic hg38 BRCA TCGA-AC-A6IX-01A 1 14 3'UTR-CDS Intra-chr p33 p33 Seq+ 84018 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZHX2-COL14A1 ZHX2 chr8 122781946 + COL14A1 chr8 120168161 + Exonic hg38 BRCA TCGA-AC-A6IX-01A 2 6 5'UTR-CDS Intra-chr q24.13 Tumor suppressor gene Transcription factor q24.12 Seq+ 84019 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFPM2-COL14A1 ZFPM2 chr8 105318981 + COL14A1 chr8 120168161 + Exonic hg38 BRCA TCGA-AC-A6IX-01A 1 5 In-Frame Intra-chr q22.3 Transcription factor q24.12 84020 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC6A6-FGD5 SLC6A6 chr3 14416453 + FGD5 chr3 14864128 + Exonic hg38 BRCA TCGA-AC-A7VB-01A 15 16 In-Frame Intra-chr p25.1 p25.1 Seq+ 84021 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELL-INSR ELL chr19 18521921 - INSR chr19 7267896 - Exonic hg38 BRCA TCGA-AC-A7VB-01A 4 34 Out-of-frame Intra-chr p13.11 p13.2 TK:InsR Seq+ 84022 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFC3H1-SHISA9 ZFC3H1 chr12 71642436 - SHISA9 chr16 13203394 + Exonic hg38 BRCA TCGA-AC-A7VB-01A 2 5 In-Frame Inter-chr q21.1 p13.12 Seq+ 84023 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF257-TRHDE ZNF257 chr19 22052635 + TRHDE chr12 72469758 + Exonic hg38 BRCA TCGA-AC-A7VB-01A 2 5 Out-of-frame Inter-chr p12 Transcription factor q21.1 Seq+ 84024 ChimerSeq TCGA FAWG TCGA_RNA-Seq LSM4-TRHDE LSM4 chr19 18323018 - TRHDE chr12 72377995 + Exonic hg38 BRCA TCGA-AC-A7VB-01A 1 3 In-Frame Inter-chr p13.11 q21.1 84025 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGTA-INSL3 SGTA chr19 2762506 - INSL3 chr19 17817059 - Exonic hg38 BRCA TCGA-AC-A8OP-01A 16 110 In-Frame Intra-chr p13.3 p13.11 Seq+ 84026 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC14L1-TEX2 SEC14L1 chr17 77143659 + TEX2 chr17 64177471 - Exonic hg38 BRCA TCGA-AC-A8OP-01A 4 20 In-Frame Intra-chr q25.2 q23.3 Seq+ 84027 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2K3-NOS2P2 MAP2K3 chr17 21305128 + NOS2P2 chr17 18497674 - Exonic hg38 BRCA TCGA-AC-A8OP-01A 1 12 Out-of-frame Intra-chr p11.2 STE:STE7 Seq+ 84028 ChimerSeq TCGA FAWG TCGA_RNA-Seq LLGL2-TANC2 LLGL2 chr17 75563463 + TANC2 chr17 63237814 + Exonic hg38 BRCA TCGA-AC-A8OP-01A 2 6 In-Frame Intra-chr q25.1 q23.2 Seq+ 84029 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTLL12-SCUBE1 TTLL12 chr22 43176320 - SCUBE1 chr22 43238954 - Exonic hg38 BRCA TCGA-AC-A8OP-01A 1 4 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 84030 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNASE2-TRMT1 DNASE2 chr19 12878382 - TRMT1 chr19 13105396 - Exonic hg38 BRCA TCGA-AC-A8OQ-01A 16 87 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 84031 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAI1-SPNS2 RAI1 chr17 17803849 + SPNS2 chr17 4525057 + Exonic hg38 BRCA TCGA-AC-A8OQ-01A 6 26 In-Frame Intra-chr p11.2 p13.2 Seq+ 84032 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGUOK-C2orf78 DGUOK chr2 73927052 + C2orf78 chr2 73813477 + Exonic hg38 BRCA TCGA-AC-A8OQ-01A 6 15 In-Frame Intra-chr p13.1 p13.1 Seq+ 84033 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABHD2-ACAN ABHD2 chr15 89155534 + ACAN chr15 88854852 + Exonic hg38 BRCA TCGA-AC-A8OQ-01A 5 3 In-Frame Intra-chr q26.1 q26.1 Seq+ 84034 ChimerSeq TCGA FAWG TCGA_RNA-Seq MROH1-ZNF707 MROH1 chr8 144148076 + ZNF707 chr8 143709253 + Exonic hg38 BRCA TCGA-AC-A8OQ-01A 4 4 5'UTR-3'UTR Intra-chr q24.3 Transcription factor 84035 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBTD2-FBXW11 UBTD2 chr5 172283596 - FBXW11 chr5 171914405 - Exonic hg38 BRCA TCGA-AC-A8OQ-01A 3 8 Out-of-frame Intra-chr q35.1 q35.1 Seq+ 84036 ChimerSeq TCGA FAWG TCGA_RNA-Seq GMEB2-STMN3 GMEB2 chr20 63592022 - STMN3 chr20 63644309 - Exonic hg38 BRCA TCGA-AC-A8OQ-01A 3 5 In-Frame Intra-chr q13.33 Transcription factor q13.33 Seq+ 84037 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRZ1-UBE2H PTPRZ1 chr7 122028643 + UBE2H chr7 129839335 - Exonic hg38 BRCA TCGA-AC-A8OQ-01A 3 5 In-Frame Intra-chr q31.32 q32.2 Seq+ 84038 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHPK-ATP2A3 SHPK chr17 3624048 - ATP2A3 chr17 3953710 - Exonic hg38 BRCA TCGA-AC-A8OQ-01A 1 9 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 84039 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMF1-FRMD4B TMF1 chr3 69028226 - FRMD4B chr3 69313517 - Exonic hg38 BRCA TCGA-AC-A8OQ-01A 1 9 In-Frame Intra-chr p14.1 Transcription factor p14.1 Seq+ 84040 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACSL3-MOGAT1 ACSL3 chr2 222861258 + MOGAT1 chr2 222688344 + Exonic hg38 BRCA TCGA-AC-A8OQ-01A 2 4 5'UTR-CDS Intra-chr q36.1 q36.1 Seq+ 84041 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK1-YDJC MAPK1 chr22 21867322 - YDJC chr22 21629407 - Exonic hg38 BRCA TCGA-AC-A8OQ-01A 1 6 Out-of-frame Intra-chr q11.22 Oncogene q11.21 84042 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX27-SCNM1 SNX27 chr1 151639119 + SCNM1 chr1 151168986 + Exonic hg38 BRCA TCGA-AC-A8OQ-01A 2 2 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 84043 ChimerSeq TCGA FAWG TCGA_RNA-Seq BPTF-NOL11 BPTF chr17 67932019 + NOL11 chr17 67739516 + Exonic hg38 BRCA TCGA-AC-A8OQ-01A 1 3 Out-of-frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 84044 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFR3B-NCOA1 EFR3B chr2 25145051 + NCOA1 chr2 24739432 + Exonic hg38 BRCA TCGA-AC-A8OQ-01A 1 2 In-Frame Intra-chr p23.3 p23.3 Oncogene Transcription factor 84045 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASXL1-XKR7 ASXL1 chr20 32369123 + XKR7 chr20 31995068 + Exonic hg38 BRCA TCGA-AC-A8OQ-01A 1 1 Out-of-frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 84046 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNL2-ANKRD65 CCNL2 chr1 1398233 - ANKRD65 chr1 1419549 - Exonic hg38 BRCA TCGA-AC-A8OR-01A 2 11 In-Frame Intra-chr p36.33 p36.33 Seq+ 84047 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK1-KCTD14 PAK1 chr11 77379241 - KCTD14 chr11 78017270 - Exonic hg38 BRCA TCGA-AN-A03Y-01A 13 139 Out-of-frame Intra-chr q14.1 STE:STE20 q14.1 Seq+ 84048 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPAT4-FNTA GPAT4 chr8 41615048 + FNTA chr8 43085160 + Exonic hg38 BRCA TCGA-AN-A03Y-01A 5 78 In-Frame Intra-chr p11.21 p11.21 84049 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KB2-PAAF1 RPS6KB2 chr11 67429240 + PAAF1 chr11 73916545 + Exonic hg38 BRCA TCGA-AN-A03Y-01A 8 45 In-Frame Intra-chr q13.2 q13.4 Seq+ 84050 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARAP1-MOGAT2 ARAP1 chr11 72699005 - MOGAT2 chr11 75719992 + Exonic hg38 BRCA TCGA-AN-A03Y-01A 1 31 Out-of-frame Intra-chr q13.4 q13.5 Seq+ 84051 ChimerSeq TCGA FAWG TCGA_RNA-Seq EMSY-MYO7A EMSY chr11 76539640 + MYO7A chr11 77147798 + Exonic hg38 BRCA TCGA-AN-A03Y-01A 3 17 Out-of-frame Intra-chr q13.5 q13.5 84052 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLNS1A-GAB2 CLNS1A chr11 77619606 - GAB2 chr11 78227051 - Exonic hg38 BRCA TCGA-AN-A03Y-01A 2 12 3'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 84053 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H7B-PRPF31 ZC3H7B chr22 41301772 + PRPF31 chr19 54115684 + Exonic hg38 BRCA TCGA-AN-A041-01A 25 12 5'UTR-3'UTR Inter-chr q13.2 Seq+ 84054 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARA-PSME3 RARA chr17 40356646 + PSME3 chr17 42837649 + Exonic hg38 BRCA TCGA-AN-A041-01A 8 34 3'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q21.31 Seq+ 84055 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF139-ASPH RNF139 chr8 124475290 + ASPH chr8 61653660 - Exonic hg38 BRCA TCGA-AN-A041-01A 4 10 In-Frame Intra-chr q24.13 q12.3 Seq+ 84056 ChimerSeq TCGA FAWG TCGA_RNA-Seq P4HB-CPB1 P4HB chr17 81859300 - CPB1 chr3 148841823 + Exonic hg38 BRCA TCGA-AN-A041-01A 1 19 Out-of-frame Inter-chr q25.3 q24 84057 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP1A2-CPB1 ATP1A2 chr1 160142764 + CPB1 chr3 148844488 + Exonic hg38 BRCA TCGA-AN-A041-01A 1000 1000 Out-of-frame Inter-chr q23.2 q24 84058 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDXDC1-LMF1 PDXDC1 chr16 15008847 + LMF1 chr16 893072 - Exonic hg38 BRCA TCGA-AN-A046-01A 24 43 5'UTR-CDS Intra-chr p13.11 p13.3 Seq+ 84059 ChimerSeq TCGA FAWG TCGA_RNA-Seq MECR-NAALADL2 MECR chr1 29230731 - NAALADL2 chr3 175755220 + Exonic hg38 BRCA TCGA-AN-A049-01A 1 12 Out-of-frame Inter-chr p35.3 q26.31 Seq+ 84060 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP8-GOLGA8CP USP8 chr15 50496084 + GOLGA8CP chr15 20566104 + Exonic hg38 BRCA TCGA-AN-A049-01A 2 5 CDS-3'UTR Intra-chr q21.2 q11.2 Seq+ 84061 ChimerSeq TCGA FAWG TCGA_RNA-Seq TADA2A-NLK TADA2A chr17 37427009 + NLK chr17 28122603 + Exonic hg38 BRCA TCGA-AN-A049-01A 1 7 3'UTR-CDS Intra-chr q12 q11.2 CMGC:MAPK Seq+ 84062 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPF40B-SPATS2 PRPF40B chr12 49623593 + SPATS2 chr12 49460770 + Exonic hg38 BRCA TCGA-AN-A049-01A 1 3 CDS-5'UTR Intra-chr q13.12 q13.12 Seq+ 84063 ChimerSeq TCGA FAWG TCGA_RNA-Seq DST-KIAA0319L DST chr6 56692388 - KIAA0319L chr1 35435081 - Exonic hg38 BRCA TCGA-AN-A04A-01A 4 34 5'UTR-CDS Inter-chr p12.1 Oncogene p34.3 Seq+ 84064 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAPG-GREB1L NAPG chr18 10530837 + GREB1L chr18 21473031 + Exonic hg38 BRCA TCGA-AN-A04A-01A 2 31 In-Frame Intra-chr p11.22 q11.1 Seq+ 84065 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPX2-DEFB123 TPX2 chr20 31742647 + DEFB123 chr20 31450029 + Exonic hg38 BRCA TCGA-AN-A04A-01A 1 6 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 84066 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3GL1-MUM1 SH3GL1 chr19 4400324 - MUM1 chr19 1357009 + Exonic hg38 BRCA TCGA-AN-A04A-01A 1 2 Out-of-frame Intra-chr p13.3 p13.3 Tumor suppressor gene Seq+ 84067 ChimerSeq TCGA FAWG TCGA_RNA-Seq PALLD-NAA15 PALLD chr4 168668368 + NAA15 chr4 139370211 + Exonic hg38 BRCA TCGA-AN-A04C-01A 38 134 In-Frame Intra-chr q32.3 q31.1 Seq+ 84068 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLCN3-SMAD1 CLCN3 chr4 169636088 + SMAD1 chr4 145553784 + Exonic hg38 BRCA TCGA-AN-A04C-01A 26 72 In-Frame Intra-chr q33 q31.21 Transcription factor Seq+ 84069 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG5-QRSL1 ATG5 chr6 106279661 - QRSL1 chr6 106665782 + Exonic hg38 BRCA TCGA-AN-A04C-01A 9 82 In-Frame Intra-chr q21 q21 Seq+ 84070 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM160A1-IL15 FAM160A1 chr4 151588926 + IL15 chr4 141732738 + Exonic hg38 BRCA TCGA-AN-A04C-01A 15 56 In-Frame Intra-chr q31.3 q31.21 Seq+ 84071 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCTP-CALCOCO2 PCTP chr17 55751244 + CALCOCO2 chr17 48860314 + Exonic hg38 BRCA TCGA-AN-A04C-01A 9 25 In-Frame Intra-chr q22 q21.32 Seq+ 84072 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2Z-ZNF652 UBE2Z chr17 48921272 + ZNF652 chr17 49317983 - Exonic hg38 BRCA TCGA-AN-A04C-01A 6 12 CDS-5'UTR Intra-chr q21.32 q21.33 Transcription factor Seq+ 84073 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP5G1-SKAP1 ATP5G1 chr17 48893456 + SKAP1 chr17 48363814 - Exonic hg38 BRCA TCGA-AN-A04C-01A 1 20 Out-of-frame Intra-chr q21.32 q21.32 84074 ChimerSeq TCGA FAWG TCGA_RNA-Seq COX6B1-SERTAD1 COX6B1 chr19 35651349 + SERTAD1 chr19 40423546 - Exonic hg38 BRCA TCGA-AN-A04C-01A 3 12 CDS-5'UTR Intra-chr q13.12 q13.2 Seq+ 84075 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD46-TMEM222 ANKRD46 chr8 100559711 - TMEM222 chr1 27330720 + Exonic hg38 BRCA TCGA-AN-A04D-01A 33 57 5'UTR-5'UTR Inter-chr q22.3 p36.11 Seq+ 84076 ChimerSeq TCGA FAWG TCGA_RNA-Seq N4BP2L2-ZAR1L N4BP2L2 chr13 32527408 - ZAR1L chr13 32304022 - Exonic hg38 BRCA TCGA-AN-A04D-01A 9 40 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 84077 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEF1DP3-CLDN10 EEF1DP3 chr13 31846939 + CLDN10 chr13 95560132 + Exonic hg38 BRCA TCGA-AN-A04D-01A 10 16 5'UTR-CDS Intra-chr q13.1 q32.1 Seq+ 84078 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPIF-REEP3 PPIF chr10 79347743 + REEP3 chr10 63594778 + Exonic hg38 BRCA TCGA-AN-A0AJ-01A 203 298 In-Frame Intra-chr q22.3 q21.3 Seq+ 84079 ChimerSeq TCGA FAWG TCGA_RNA-Seq LACE1-ZUFSP LACE1 chr6 108324048 + ZUFSP chr6 116635879 - Exonic hg38 BRCA TCGA-AN-A0AJ-01A 67 177 Out-of-frame Intra-chr q22.1 Transcription factor Seq+ 84080 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRHL2-FAM213A GRHL2 chr8 101492789 + FAM213A chr10 80431986 + Exonic hg38 BRCA TCGA-AN-A0AJ-01A 79 92 Out-of-frame Inter-chr q22.3 Transcription factor q23.1 Seq+ 84081 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD151-MIPEP CD151 chr11 833026 + MIPEP chr13 23760217 - Exonic hg38 BRCA TCGA-AN-A0AJ-01A 28 13 5'UTR-CDS Inter-chr p15.5 q12.12 Seq+ 84082 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC5-LCT ZDHHC5 chr11 57673194 + LCT chr2 135798138 - Exonic hg38 BRCA TCGA-AN-A0AJ-01A 11 72 Out-of-frame Inter-chr q12.1 q21.3 Seq+ 84083 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADK-KCNMA1 ADK chr10 74314745 + KCNMA1 chr10 77251256 - Exonic hg38 BRCA TCGA-AN-A0AJ-01A 10 15 In-Frame Intra-chr q22.2 q22.3 Seq+ 84084 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRP12-CRTAC1 RRP12 chr10 97373046 - CRTAC1 chr10 98011337 - Exonic hg38 BRCA TCGA-AN-A0AJ-01A 6 22 In-Frame Intra-chr q24.1 q24.2 Seq+ 84085 ChimerSeq TCGA FAWG TCGA_RNA-Seq XYLT2-ACSF2 XYLT2 chr17 50358540 + ACSF2 chr17 50460677 + Exonic hg38 BRCA TCGA-AN-A0AJ-01A 3 11 Out-of-frame Intra-chr q21.33 q21.33 Seq+ 84086 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRHL2-TSPAN14 GRHL2 chr8 101492789 + TSPAN14 chr10 80489217 + Exonic hg38 BRCA TCGA-AN-A0AJ-01A 2 13 CDS-5'UTR Inter-chr q22.3 Transcription factor q23.1 Seq+ 84087 ChimerSeq TCGA FAWG TCGA_RNA-Seq KARS-WDR59 KARS chr16 75647578 - WDR59 chr16 74965822 - Exonic hg38 BRCA TCGA-AN-A0AJ-01A 2 13 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 84088 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK39-MAT1A STK39 chr2 168074982 - MAT1A chr10 80285589 - Exonic hg38 BRCA TCGA-AN-A0AJ-01A 3 8 Out-of-frame Inter-chr q24.3 q22.3 Seq+ 84089 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-ANLN BCAS3 chr17 60747279 + ANLN chr7 36449665 + Exonic hg38 BRCA TCGA-AN-A0AJ-01A 1 11 Out-of-frame Inter-chr q23.2 p14.2 84090 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR3A-TP53BP2 POLR3A chr10 78013650 - TP53BP2 chr1 223821367 - Exonic hg38 BRCA TCGA-AN-A0AJ-01A 1 11 In-Frame Inter-chr q22.3 q41 Tumor suppressor gene 84091 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF7-SFTPA1 ARHGEF7 chr13 111217880 + SFTPA1 chr10 79611803 + Exonic hg38 BRCA TCGA-AN-A0AJ-01A 1 3 In-Frame Inter-chr q34 q22.3 84092 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAG6-LY6G5C BAG6 chr6 31648677 - LY6G5C chr6 31677120 - Exonic hg38 BRCA TCGA-AN-A0AL-01A 179 644 5'UTR-5'UTR Intra-chr p21.33 Seq+ 84093 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRMU-TTC38 TRMU chr22 46343368 + TTC38 chr22 46292203 + Exonic hg38 BRCA TCGA-AN-A0AL-01A 12 111 5'UTR-CDS Intra-chr q13.31 q13.31 Seq+ 84094 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNRPA1-PCSK6 SNRPA1 chr15 101291962 - PCSK6 chr15 101307325 - Exonic hg38 BRCA TCGA-AN-A0AL-01A 5 34 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 84095 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTLL7-MCOLN2 TTLL7 chr1 83904079 - MCOLN2 chr1 84938082 - Exonic hg38 BRCA TCGA-AN-A0AL-01A 6 14 In-Frame Intra-chr p31.1 p22.3 Seq+ 84096 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLLT10-NAV1 MLLT10 chr10 21617207 + NAV1 chr1 201821627 + Exonic hg38 BRCA TCGA-AN-A0AL-01A 3 25 CDS-3'UTR Inter-chr p12.31 Oncogene q32.1 Seq+ 84097 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR107-VPS13A GPR107 chr9 130092381 + VPS13A chr9 77332010 + Exonic hg38 BRCA TCGA-AN-A0AL-01A 4 6 Out-of-frame Intra-chr q34.11 q21.2 Seq+ 84098 ChimerSeq TCGA FAWG TCGA_RNA-Seq NLGN4X-ACTN4 NLGN4X chrX 6228541 - ACTN4 chr19 38700600 + Exonic hg38 BRCA TCGA-AN-A0AL-01A 1 16 5'UTR-3'UTR Inter-chr p22.31 84099 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIP5K1B-PGM5 PIP5K1B chr9 68940790 + PGM5 chr9 68465093 + Exonic hg38 BRCA TCGA-AN-A0AL-01A 1 12 In-Frame Intra-chr q21.11 q21.11 Seq+ 84100 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR2-CASP7 FGFR2 chr10 121483698 - CASP7 chr10 113697494 + Exonic hg38 BRCA TCGA-AN-A0AL-01A 1 11 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q25.3 84101 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRMT11-ICK TRMT11 chr6 125986622 + ICK chr6 53019359 - Exonic hg38 BRCA TCGA-AN-A0AL-01A 2 6 Out-of-frame Intra-chr q22.32 p12.1 CMGC:RCK Oncogene Seq+ 84102 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDHX-CAT PDHX chr11 34960518 + CAT chr11 34470958 + Exonic hg38 BRCA TCGA-AN-A0AL-01A 2 4 Out-of-frame Intra-chr p13 p13 Tumor suppressor gene Seq+ 84103 ChimerSeq TCGA FAWG TCGA_RNA-Seq C3orf67-GPR34 C3orf67 chr3 59039557 - GPR34 chrX 41695555 + Exonic hg38 BRCA TCGA-AN-A0AL-01A 1 7 5'UTR-5'UTR Inter-chr p14.2 p11.4 84104 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIO-MARCH11 TRIO chr5 14488260 + 2019_ 3_ 11_ chr5 16091081 - Exonic hg38 BRCA TCGA-AN-A0AM-01A 76 242 Out-of-frame Intra-chr p15.2 p15.1 Seq+ 84105 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPNE1-LPO CPNE1 chr20 35664760 - LPO chr17 58267349 + Exonic hg38 BRCA TCGA-AN-A0AM-01A 97 119 5'UTR-5'UTR Inter-chr q11.22 q22 Seq+ 84106 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM12-LPO RBM12 chr20 35664760 - LPO chr17 58267349 + Exonic hg38 BRCA TCGA-AN-A0AM-01A 97 119 5'UTR-5'UTR Inter-chr q11.22 q22 Seq+ 84107 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL12RB2-DAB1 IL12RB2 chr1 67380123 + DAB1 chr1 57145429 - Exonic hg38 BRCA TCGA-AN-A0AM-01A 32 179 In-Frame Intra-chr p31.3 p32.1 Seq+ 84108 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCM6-DARS MCM6 chr2 135865013 - DARS chr2 135907407 - Exonic hg38 BRCA TCGA-AN-A0AM-01A 42 111 In-Frame Intra-chr q21.3 q21.3 Seq+ 84109 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNK1-PIP4K2C WNK1 chr12 857249 + PIP4K2C chr12 57601526 + Exonic hg38 BRCA TCGA-AN-A0AM-01A 30 143 Out-of-frame Intra-chr p13.33 q13.3 Seq+ 84110 ChimerSeq TCGA FAWG TCGA_RNA-Seq LEMD3-LYZ LEMD3 chr12 65171118 + LYZ chr12 69350108 + Exonic hg38 BRCA TCGA-AN-A0AM-01A 31 107 In-Frame Intra-chr q14.3 q15 Seq+ 84111 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM96A-SNX1 FAM96A chr15 64088687 - SNX1 chr15 64112573 + Exonic hg38 BRCA TCGA-AN-A0AM-01A 23 43 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 84112 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST6GALNAC2-JMJD6 ST6GALNAC2 chr17 76578756 - JMJD6 chr17 76720498 - Exonic hg38 BRCA TCGA-AN-A0AM-01A 16 70 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 84113 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX1-FAM96A SNX1 chr15 64096172 + FAM96A chr15 64081151 - Exonic hg38 BRCA TCGA-AN-A0AM-01A 20 49 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 84114 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALT5-PTGIS B4GALT5 chr20 49713576 - PTGIS chr20 49550189 - Exonic hg38 BRCA TCGA-AN-A0AM-01A 22 30 Out-of-frame Intra-chr q13.13 q13.13 Seq+ 84115 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHBDF2-JMJD6 RHBDF2 chr17 76487712 - JMJD6 chr17 76718860 - Exonic hg38 BRCA TCGA-AN-A0AM-01A 9 60 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 84116 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAND1-TUSC5 CAND1 chr12 67282053 + TUSC5 chr17 1295491 + Exonic hg38 BRCA TCGA-AN-A0AM-01A 17 27 Out-of-frame Inter-chr q14.3 p13.3 Seq+ 84117 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF20-DLGAP4 PHF20 chr20 35914197 + DLGAP4 chr20 36442727 + Exonic hg38 BRCA TCGA-AN-A0AM-01A 12 35 Out-of-frame Intra-chr q11.22 Transcription factor q11.23 Seq+ 84118 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCML2-MAP7D2 SCML2 chrX 18304972 - MAP7D2 chrX 20064805 - Exonic hg38 BRCA TCGA-AN-A0AM-01A 13 29 In-Frame Intra-chr p22.13 p22.12 Seq+ 84119 ChimerSeq TCGA FAWG TCGA_RNA-Seq B3GNTL1-PPP1R27 B3GNTL1 chr17 83051737 - PPP1R27 chr17 81834833 - Exonic hg38 BRCA TCGA-AN-A0AM-01A 13 11 3'UTR-CDS Intra-chr q25.3 Seq+ 84120 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBTPS2-EDEM2 MBTPS2 chrX 21878692 + EDEM2 chr20 35126375 - Exonic hg38 BRCA TCGA-AN-A0AM-01A 7 13 In-Frame Inter-chr p22.12 q11.22 Seq+ 84121 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD52-PGS1 ANKRD52 chr12 56252015 - PGS1 chr17 78414952 + Exonic hg38 BRCA TCGA-AN-A0AM-01A 3 26 CDS-5'UTR Inter-chr q13.3 q25.3 Seq+ 84122 ChimerSeq TCGA FAWG TCGA_RNA-Seq MID1-PIR MID1 chrX 10833554 - PIR chrX 15491309 - Exonic hg38 BRCA TCGA-AN-A0AM-01A 4 22 5'UTR-5'UTR Intra-chr p22.2 p22.2 Seq+ 84123 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPCDC-SCAMP2 PPCDC chr15 75028453 + SCAMP2 chr15 74854649 - Exonic hg38 BRCA TCGA-AN-A0AM-01A 4 21 In-Frame Intra-chr q24.2 q24.1 Seq+ 84124 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT9-SMG6 SEPT9 chr17 77482335 + SMG6 chr17 2188515 - Exonic hg38 BRCA TCGA-AN-A0AM-01A 7 5 Out-of-frame Intra-chr p13.3 Seq+ 84125 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB21-MDM1 RAB21 chr12 71770699 + MDM1 chr12 68302872 - Exonic hg38 BRCA TCGA-AN-A0AM-01A 2 23 In-Frame Intra-chr q21.1 q15 Seq+ 84126 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPAIN-LRRC27 RPAIN chr17 5421466 + LRRC27 chr10 132361457 + Exonic hg38 BRCA TCGA-AN-A0AM-01A 3 19 In-Frame Inter-chr p13.2 q26.3 Seq+ 84127 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAND2P-SEC11A SCAND2P chr15 84632298 + SEC11A chr15 84670069 - Exonic hg38 BRCA TCGA-AN-A0AM-01A 4 15 5'UTR-CDS Intra-chr q25.2 q25.3 84128 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBCD-NFIX TBCD chr17 82941483 + NFIX chr19 13025021 + Exonic hg38 BRCA TCGA-AN-A0AM-01A 2 22 5'UTR-5'UTR Inter-chr p13.13 Transcription factor Seq+ 84129 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-NRG3 FRS2 chr12 69532056 + NRG3 chr10 82865411 + Exonic hg38 BRCA TCGA-AN-A0AM-01A 2 13 5'UTR-CDS Inter-chr q15 q23.1 Seq+ 84130 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLA1-TIMELESS POLA1 chrX 24717758 + TIMELESS chr12 56434231 - Exonic hg38 BRCA TCGA-AN-A0AM-01A 4 3 CDS-5'UTR Inter-chr p22.11 q13.3 Seq+ 84131 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARFGEF3-TNNI3K ARFGEF3 chr6 138162171 + TNNI3K chr1 74436474 + Exonic hg38 BRCA TCGA-AN-A0AM-01A 2 10 In-Frame Inter-chr q23.3 p31.1 84132 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALNT3-SLCO4A1 B4GALNT3 chr12 556866 + SLCO4A1 chr20 62658677 + Exonic hg38 BRCA TCGA-AN-A0AM-01A 3 6 In-Frame Inter-chr p13.33 q13.33 Seq+ 84133 ChimerSeq TCGA FAWG TCGA_RNA-Seq NMT2-ITGA8 NMT2 chr10 15128350 - ITGA8 chr10 15597299 - Exonic hg38 BRCA TCGA-AN-A0AM-01A 2 9 In-Frame Intra-chr p13 p13 Seq+ 84134 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC16A10-PEX3 SLC16A10 chr6 111088095 + PEX3 chr6 143470961 + Exonic hg38 BRCA TCGA-AN-A0AM-01A 1 13 In-Frame Intra-chr q21 q24.2 84135 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPM1-SNHG11 DPM1 chr20 50955186 - SNHG11 chr20 38447466 + Exonic hg38 BRCA TCGA-AN-A0AM-01A 3 2 CDS-5'UTR Intra-chr q13.13 q11.23 84136 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK4-CPM STK4 chr20 45001353 + CPM chr12 68842329 - Exonic hg38 BRCA TCGA-AN-A0AM-01A 1 10 CDS-3'UTR Inter-chr q13.12 q15 84137 ChimerSeq TCGA FAWG TCGA_RNA-Seq UTRN-SGK1 UTRN chr6 144678578 + SGK1 chr6 134207431 - Exonic hg38 BRCA TCGA-AN-A0AM-01A 1 10 Out-of-frame Intra-chr q24.2 q23.2 AGC:SGK Oncogene Seq+ 84138 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCP2-FAF1 SCP2 chr1 52961629 + FAF1 chr1 50705891 - Exonic hg38 BRCA TCGA-AN-A0AM-01A 2 4 Out-of-frame Intra-chr p32.3 p32.3 84139 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP15-PKP4 USP15 chr12 62389988 + PKP4 chr2 158640627 + Exonic hg38 BRCA TCGA-AN-A0AM-01A 1 7 In-Frame Inter-chr q14.1 q24.1 Seq+ 84140 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPSF6-MYRFL CPSF6 chr12 69239706 + MYRFL chr12 69855280 + Exonic hg38 BRCA TCGA-AN-A0AM-01A 2 1 Out-of-frame Intra-chr q15 q15 Transcription factor 84141 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC2-RBM39 TRAPPC2 chrX 13734525 - RBM39 chr20 35721877 - Exonic hg38 BRCA TCGA-AN-A0AM-01A 1 5 5'UTR-CDS Inter-chr p22.2 q11.22 84142 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASCC3-GRIK2 ASCC3 chr6 100766565 - GRIK2 chr6 101799648 + Exonic hg38 BRCA TCGA-AN-A0AM-01A 1 4 In-Frame Intra-chr q16.3 q16.3 Seq+ 84143 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDM1-LGR5 MDM1 chr12 68296923 - LGR5 chr12 71504614 + Exonic hg38 BRCA TCGA-AN-A0AM-01A 1 2 Out-of-frame Intra-chr q15 q21.1 84144 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDM2-XPOT MDM2 chr12 68828930 + XPOT chr12 64439243 + Exonic hg38 BRCA TCGA-AN-A0AM-01A 1000 1000 Out-of-frame Intra-chr q15 Oncogene q14.2 Seq+ 84145 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRD4-NOTCH3 BRD4 chr19 15332290 - NOTCH3 chr19 15170825 - Exonic hg38 BRCA TCGA-AN-A0AR-01A 91 81 5'UTR-CDS Intra-chr p13.12 Atypical:BRD p13.12 Oncogene Tumor suppressor gene Seq+ 84146 ChimerSeq TCGA FAWG TCGA_RNA-Seq OLFM2-TBC1D21 OLFM2 chr19 9936304 - TBC1D21 chr15 73881644 + Exonic hg38 BRCA TCGA-AN-A0AR-01A 8 130 In-Frame Inter-chr p13.2 q24.1 Seq+ 84147 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A11-ATPAF2 SLC39A11 chr17 72947752 - ATPAF2 chr17 17977976 - Exonic hg38 BRCA TCGA-AN-A0AR-01A 10 23 CDS-3'UTR Intra-chr q25.1 p11.2 84148 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFAP2A-MAK TFAP2A chr6 10404508 - MAK chr6 10764606 - Exonic hg38 BRCA TCGA-AN-A0AR-01A 7 19 Out-of-frame Intra-chr p24.3 Tumor suppressor gene Transcription factor p24.2 CMGC:RCK Seq+ 84149 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF79-SLC2A8 ZNF79 chr9 127428917 + SLC2A8 chr9 127403117 + Exonic hg38 BRCA TCGA-AN-A0AR-01A 3 20 Out-of-frame Intra-chr q33.3 Transcription factor q33.3 Seq+ 84150 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP6NL-CCDC3 USP6NL chr10 11489102 - CCDC3 chr10 13074100 - Exonic hg38 BRCA TCGA-AN-A0AR-01A 3 18 CDS-5'UTR Intra-chr p14 p13 Seq+ 84151 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH2NL-RAD51B NOTCH2NL chr1 146189300 - RAD51B chr14 68729808 + Exonic hg38 BRCA TCGA-AN-A0AR-01A 5 8 Out-of-frame Inter-chr q21.1 q24.1 84152 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESCO1-KANK1 ESCO1 chr18 21600623 - KANK1 chr9 710804 + Exonic hg38 BRCA TCGA-AN-A0AR-01A 3 15 5'UTR-5'UTR Inter-chr q11.2 p24.3 Tumor suppressor gene Seq+ 84153 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP26-MEIKIN ARHGAP26 chr5 142770915 + MEIKIN chr5 131818863 - Exonic hg38 BRCA TCGA-AN-A0AR-01A 1 13 Out-of-frame Intra-chr q31.3 q31.1 84154 ChimerSeq TCGA FAWG TCGA_RNA-Seq SESTD1-ZNF385B SESTD1 chr2 179264499 - ZNF385B chr2 179544969 - Exonic hg38 BRCA TCGA-AN-A0AR-01A 3 2 5'UTR-5'UTR Intra-chr q31.2 q31.3 Transcription factor Seq+ 84155 ChimerSeq TCGA FAWG TCGA_RNA-Seq XYLB-ITGA9 XYLB chr3 38348632 + ITGA9 chr3 37653714 + Exonic hg38 BRCA TCGA-AN-A0AR-01A 3 2 Out-of-frame Intra-chr p22.2 p22.2 Oncogene Seq+ 84156 ChimerSeq TCGA FAWG TCGA_RNA-Seq INPP5F-FAM45A INPP5F chr10 119751156 + FAM45A chr10 119107948 + Exonic hg38 BRCA TCGA-AN-A0AR-01A 2 1 Out-of-frame Intra-chr q26.11 q26.11 84157 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF5-RAB5B DCAF5 chr14 69152765 - RAB5B chr12 55986869 + Exonic hg38 BRCA TCGA-AN-A0AS-01A 5 19 CDS-5'UTR Inter-chr q24.1 q13.2 Seq+ 84158 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANXA7-LGALS12 ANXA7 chr10 73396519 - LGALS12 chr11 63508553 + Exonic hg38 BRCA TCGA-AN-A0AS-01A 6 13 In-Frame Inter-chr q22.2 Tumor suppressor gene q12.3 Seq+ 84159 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSC22D1-DNAJC5B TSC22D1 chr13 44573163 - DNAJC5B chr8 66076660 + Exonic hg38 BRCA TCGA-AN-A0AS-01A 5 10 In-Frame Inter-chr q14.11 Tumor suppressor gene Transcription factor q13.1 Seq+ 84160 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A9-USP15 SLC39A9 chr14 69424202 + USP15 chr12 62389431 + Exonic hg38 BRCA TCGA-AN-A0AS-01A 6 4 Out-of-frame Inter-chr q24.1 q14.1 Seq+ 84161 ChimerSeq TCGA FAWG TCGA_RNA-Seq IMPAD1-ZCCHC24 IMPAD1 chr8 56993199 - ZCCHC24 chr10 79394440 - Exonic hg38 BRCA TCGA-AN-A0AS-01A 4 8 In-Frame Inter-chr q12.1 q22.3 Seq+ 84162 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPME1-NARS2 PPME1 chr11 74204445 + NARS2 chr11 78528936 - Exonic hg38 BRCA TCGA-AN-A0AS-01A 2 16 In-Frame Intra-chr q13.4 q14.1 Seq+ 84163 ChimerSeq TCGA FAWG TCGA_RNA-Seq LGALS12-PLAC9 LGALS12 chr11 63510501 + PLAC9 chr10 80142082 + Exonic hg38 BRCA TCGA-AN-A0AS-01A 2 5 Out-of-frame Inter-chr q12.3 q22.3 Seq+ 84164 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF5-DPY19L2 DCAF5 chr14 69152765 - DPY19L2 chr12 63661481 - Exonic hg38 BRCA TCGA-AN-A0AS-01A 2 2 Out-of-frame Inter-chr q24.1 q14.2 Seq+ 84165 ChimerSeq TCGA FAWG TCGA_RNA-Seq C16orf70-CMTM4 C16orf70 chr16 67110239 + CMTM4 chr16 66636581 - Exonic hg38 BRCA TCGA-AN-A0AS-01A 1 1 Out-of-frame Intra-chr q22.1 q22.1 84166 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD302-ALPL CD302 chr2 159777938 - ALPL chr1 21553978 + Exonic hg38 BRCA TCGA-AN-A0AT-01A 12 29 CDS-5'UTR Inter-chr q24.2 p36.12 Tumor suppressor gene Seq+ 84167 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCM5-HMOX1 MCM5 chr22 35408563 + HMOX1 chr22 35389864 + Exonic hg38 BRCA TCGA-AN-A0AT-01A 10 35 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 84168 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPDZ-NFIB MPDZ chr9 13279564 - NFIB chr9 14150265 - Exonic hg38 BRCA TCGA-AN-A0AT-01A 9 13 5'UTR-5'UTR Intra-chr p23 p22.3 Transcription factor Seq+ 84169 ChimerSeq TCGA FAWG TCGA_RNA-Seq YIPF4-COMMD1 YIPF4 chr2 32307190 + COMMD1 chr2 62135831 + Exonic hg38 BRCA TCGA-AN-A0AT-01A 5 24 3'UTR-CDS Intra-chr p22.3 p15 84170 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRUB1-FAM160B1 TRUB1 chr10 114959807 + FAM160B1 chr10 114899494 + Exonic hg38 BRCA TCGA-AN-A0AT-01A 3 22 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 84171 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM4SF18-WWTR1 TM4SF18 chr3 149324880 - WWTR1 chr3 149542537 - Exonic hg38 BRCA TCGA-AN-A0AT-01A 1 4 Out-of-frame Intra-chr q25.1 q25.1 84172 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R12B-CAMSAP2 PPP1R12B chr1 202449171 + CAMSAP2 chr1 200852541 + Exonic hg38 BRCA TCGA-AN-A0AT-01A 1 3 Out-of-frame Intra-chr q32.1 q32.1 84173 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KB1-EFCAB3 RPS6KB1 chr17 59893325 + EFCAB3 chr17 62382963 + Exonic hg38 BRCA TCGA-AN-A0FD-01A 16 35 Out-of-frame Intra-chr q23.1 Oncogene q23.2 Seq+ 84174 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLTC-FAM129C CLTC chr17 59620173 + FAM129C chr19 17537376 + Exonic hg38 BRCA TCGA-AN-A0FD-01A 8 47 Out-of-frame Inter-chr q23.1 p13.11 Seq+ 84175 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSI2-RAD51C MSI2 chr17 57262192 + RAD51C chr17 58694931 + Exonic hg38 BRCA TCGA-AN-A0FD-01A 4 13 Out-of-frame Intra-chr q22 q22 Tumor suppressor gene Seq+ 84176 ChimerSeq TCGA FAWG TCGA_RNA-Seq YWHAZ-SCAF11 YWHAZ chr8 100948596 - SCAF11 chr12 45951727 - Exonic hg38 BRCA TCGA-AN-A0FD-01A 4 10 In-Frame Inter-chr q22.3 q12 Seq+ 84177 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM59L-GGNBP2 TMEM59L chr19 18620573 + GGNBP2 chr17 36581363 + Exonic hg38 BRCA TCGA-AN-A0FD-01A 3 10 Out-of-frame Inter-chr p13.11 Tumor suppressor gene Seq+ 84178 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPM4-INTS2 TPM4 chr19 16077130 + INTS2 chr17 61875038 - Exonic hg38 BRCA TCGA-AN-A0FD-01A 1 18 5'UTR-CDS Inter-chr p13.12 q23.2 Seq+ 84179 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKDC-CEP290 PRKDC chr8 47831814 - CEP290 chr12 88139564 - Exonic hg38 BRCA TCGA-AN-A0FD-01A 3 5 In-Frame Inter-chr q11.21 Oncogene q21.32 Seq+ 84180 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD12-KIAA2022 PSMD12 chr17 67366412 - KIAA2022 chrX 74745697 - Exonic hg38 BRCA TCGA-AN-A0FD-01A 2 5 Out-of-frame Inter-chr q24.2 q13.3 Seq+ 84181 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL18A-HELZ RPL18A chr19 17862223 + HELZ chr17 67145890 - Exonic hg38 BRCA TCGA-AN-A0FD-01A 1 7 Out-of-frame Inter-chr p13.11 q24.2 Seq+ 84182 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOS2-NEMF SOS2 chr14 50231197 - NEMF chr14 49795944 - Exonic hg38 BRCA TCGA-AN-A0FF-01A 3 35 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 84183 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENAH-PTPN14 ENAH chr1 225512657 - PTPN14 chr1 214378102 - Exonic hg38 BRCA TCGA-AN-A0FF-01A 1 10 In-Frame Intra-chr q42.12 q41 84184 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF4G1-ABCF3 EIF4G1 chr3 184334834 + ABCF3 chr3 184193102 + Exonic hg38 BRCA TCGA-AN-A0FJ-01A 59 173 Out-of-frame Intra-chr q27.1 q27.1 Seq+ 84185 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD1-CDH23 NSD1 chr5 177136030 + CDH23 chr10 71675112 + Exonic hg38 BRCA TCGA-AN-A0FJ-01A 26 60 In-Frame Inter-chr q35.3 Oncogene q22.1 Seq+ 84186 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB2-ACOX1 GRB2 chr17 75393551 - ACOX1 chr17 75953620 - Exonic hg38 BRCA TCGA-AN-A0FJ-01A 7 36 In-Frame Intra-chr q25.1 q25.1 Seq+ 84187 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO9B-DDA1 MYO9B chr19 17102557 + DDA1 chr19 17314023 + Exonic hg38 BRCA TCGA-AN-A0FJ-01A 2 53 In-Frame Intra-chr p13.11 p13.11 Seq+ 84188 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL12RB2-PDE4B IL12RB2 chr1 67330810 + PDE4B chr1 66372313 + Exonic hg38 BRCA TCGA-AN-A0FJ-01A 7 15 Out-of-frame Intra-chr p31.3 p31.3 Seq+ 84189 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABI2-CARF ABI2 chr2 203402734 + CARF chr2 202981555 + Exonic hg38 BRCA TCGA-AN-A0FJ-01A 1 27 In-Frame Intra-chr q33.2 Tumor suppressor gene q33.2 Transcription factor 84190 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNC4-GSTM4 KCNC4 chr1 110226178 + GSTM4 chr1 109665011 + Exonic hg38 BRCA TCGA-AN-A0FJ-01A 3 19 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 84191 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM83D-SF3B3 FAM83D chr20 38942126 + SF3B3 chr16 70563876 + Exonic hg38 BRCA TCGA-AN-A0FJ-01A 2 21 Out-of-frame Inter-chr q11.23 q22.1 Seq+ 84192 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTPS2-RBBP7 CTPS2 chrX 16667514 - RBBP7 chrX 16849301 - Exonic hg38 BRCA TCGA-AN-A0FJ-01A 3 15 Out-of-frame Intra-chr p22.2 p22.2 Tumor suppressor gene Seq+ 84193 ChimerSeq TCGA FAWG TCGA_RNA-Seq PACSIN2-NUPL2 PACSIN2 chr22 42912021 - NUPL2 chr7 23185070 + Exonic hg38 BRCA TCGA-AN-A0FJ-01A 2 16 Out-of-frame Inter-chr q13.2 p15.3 Seq+ 84194 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNPO2-TRIM24 SYNPO2 chr4 118889141 + TRIM24 chr7 138567481 + Exonic hg38 BRCA TCGA-AN-A0FJ-01A 4 8 In-Frame Inter-chr q26 Tumor suppressor gene q33 Oncogene Tumor suppressor gene Seq+ 84195 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSPL-TMCC1 CTDSPL chr3 37971499 + TMCC1 chr3 129671264 - Exonic hg38 BRCA TCGA-AN-A0FJ-01A 5 3 In-Frame Intra-chr p22.2 Tumor suppressor gene q22.1 Seq+ 84196 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDGF-RRNAD1 HDGF chr1 156745008 - RRNAD1 chr1 156736632 + Exonic hg38 BRCA TCGA-AN-A0FJ-01A 3 10 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 84197 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT14-FAM98A GALNT14 chr2 31137958 - FAM98A chr2 33595637 - Exonic hg38 BRCA TCGA-AN-A0FJ-01A 2 11 Out-of-frame Intra-chr p23.1 p22.3 Seq+ 84198 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXTL2-DPH5 EXTL2 chr1 100894633 - DPH5 chr1 101021765 - Exonic hg38 BRCA TCGA-AN-A0FJ-01A 1 14 5'UTR-CDS Intra-chr p21.2 Tumor suppressor gene p21.2 84199 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNMT1-ICAM3 DNMT1 chr19 10173090 - ICAM3 chr19 10335976 - Exonic hg38 BRCA TCGA-AN-A0FJ-01A 2 9 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene Transcription factor p13.2 Seq+ 84200 ChimerSeq TCGA FAWG TCGA_RNA-Seq NR2C2-FGD5 NR2C2 chr3 14947906 + FGD5 chr3 14864128 + Exonic hg38 BRCA TCGA-AN-A0FJ-01A 3 5 5'UTR-CDS Intra-chr p25.1 Tumor suppressor gene Transcription factor p25.1 Seq+ 84201 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABR-CLUH ABR chr17 1050050 - CLUH chr17 2704564 - Exonic hg38 BRCA TCGA-AN-A0FJ-01A 1 10 5'UTR-5'UTR Intra-chr p13.3 p13.3 84202 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRD1-TTLL8 BRD1 chr22 49822951 - TTLL8 chr22 50034462 - Exonic hg38 BRCA TCGA-AN-A0FJ-01A 1 10 In-Frame Intra-chr q13.33 q13.33 84203 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH23-NSD1 CDH23 chr10 71741921 + NSD1 chr5 177191884 + Exonic hg38 BRCA TCGA-AN-A0FJ-01A 1 10 In-Frame Inter-chr q22.1 q35.3 Oncogene Seq+ 84204 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5370375 - RNF216 chr7 5641376 - Exonic hg38 BRCA TCGA-AN-A0FJ-01A 1 9 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 84205 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBR4-HSPG2 UBR4 chr1 19169435 - HSPG2 chr1 21844299 - Exonic hg38 BRCA TCGA-AN-A0FJ-01A 1 8 Out-of-frame Intra-chr p36.13 p36.12 Seq+ 84206 ChimerSeq TCGA FAWG TCGA_RNA-Seq UMODL1-WRB UMODL1 chr21 42109699 + WRB chr21 39408606 + Exonic hg38 BRCA TCGA-AN-A0FJ-01A 2 3 Out-of-frame Intra-chr q22.3 q22.2 Seq+ 84207 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMIP-CDYL2 CMIP chr16 81445541 + CDYL2 chr16 80685129 - Exonic hg38 BRCA TCGA-AN-A0FJ-01A 1 6 In-Frame Intra-chr q23.2 q23.2 Seq+ 84208 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGAPB-CTNNBL1 RALGAPB chr20 38521698 + CTNNBL1 chr20 37777345 + Exonic hg38 BRCA TCGA-AN-A0FJ-01A 1 6 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 84209 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYM-MYO5B DYM chr18 49378567 - MYO5B chr18 49849660 - Exonic hg38 BRCA TCGA-AN-A0FJ-01A 1 5 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 84210 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNER-TRIP12 DNER chr2 229546947 - TRIP12 chr2 229785855 - Exonic hg38 BRCA TCGA-AN-A0FJ-01A 1 3 In-Frame Intra-chr q36.3 q36.3 Seq+ 84211 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGB4-ADK ITGB4 chr17 75757107 + ADK chr10 74314667 + Exonic hg38 BRCA TCGA-AN-A0FJ-01A 1 3 Out-of-frame Inter-chr q25.1 q22.2 84212 ChimerSeq TCGA FAWG TCGA_RNA-Seq VANGL1-ATP1A1 VANGL1 chr1 115671147 + ATP1A1 chr1 116384014 + Exonic hg38 BRCA TCGA-AN-A0FK-01A 1 8 CDS-5'UTR Intra-chr p13.1 p13.1 84213 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLPI-MATN4 SLPI chr20 45254459 - MATN4 chr20 45305616 - Exonic hg38 BRCA TCGA-AN-A0FL-01A 8 21 CDS-5'UTR Intra-chr q13.12 q13.12 Seq+ 84214 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP70-COPB2 CEP70 chr3 138570318 - COPB2 chr3 139383435 - Exonic hg38 BRCA TCGA-AN-A0FL-01A 3 12 In-Frame Intra-chr q22.3 q23 Seq+ 84215 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF185-SMTN RNF185 chr22 31195581 + SMTN chr22 31080450 + Exonic hg38 BRCA TCGA-AN-A0FL-01A 1 6 5'UTR-5'UTR Intra-chr q12.2 q12.2 Seq+ 84216 ChimerSeq TCGA FAWG TCGA_RNA-Seq HN1L-CRAMP1 HN1L chr16 1678356 + CRAMP1 chr16 1673881 + Exonic hg38 BRCA TCGA-AN-A0FL-01A 1 4 Out-of-frame Intra-chr p13.3 84217 ChimerSeq TCGA FAWG TCGA_RNA-Seq QSOX1-SMR3B QSOX1 chr1 180196568 + SMR3B chr4 70390007 + Exonic hg38 BRCA TCGA-AN-A0FL-01A 1000 1000 Out-of-frame Inter-chr q25.2 q13.3 84218 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSH2-LBP SSH2 chr17 29695459 - LBP chr20 38373937 + Exonic hg38 BRCA TCGA-AN-A0FT-01A 21 148 Out-of-frame Inter-chr q11.2 q11.23 Seq+ 84219 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR45B-SEPT4 WDR45B chr17 82625389 - SEPT4 chr17 58522101 - Exonic hg38 BRCA TCGA-AN-A0FT-01A 31 46 Out-of-frame Intra-chr q25.3 q22 Tumor suppressor gene Seq+ 84220 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAT3-C17orf102 STAT3 chr17 42345559 - C17orf102 chr17 34576574 - Exonic hg38 BRCA TCGA-AN-A0FT-01A 6 16 CDS-3'UTR Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q12 Seq+ 84221 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRDM11-MRPS9 PRDM11 chr11 45147581 + MRPS9 chr2 105071313 + Exonic hg38 BRCA TCGA-AN-A0FT-01A 3 6 5'UTR-CDS Inter-chr p11.2 Tumor suppressor gene q12.1 Seq+ 84222 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRCP-CYYR1 CRCP chr7 66134374 + CYYR1 chr21 26566368 - Exonic hg38 BRCA TCGA-AN-A0FT-01A 2 9 Out-of-frame Inter-chr q11.21 q21.3 Seq+ 84223 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARA-PCTP RARA chr17 40318448 + PCTP chr17 55771106 + Exonic hg38 BRCA TCGA-AN-A0FV-01A 739 3475 5'UTR-CDS Intra-chr q21.2 Oncogene Transcription factor q22 Seq+ 84224 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM135-AAMDC TMEM135 chr11 87091395 + AAMDC chr11 77841019 + Exonic hg38 BRCA TCGA-AN-A0FV-01A 106 1244 CDS-5'UTR Intra-chr q14.2 q14.1 Seq+ 84225 ChimerSeq TCGA FAWG TCGA_RNA-Seq URGCP-CCDC129 URGCP chr7 43887415 - CCDC129 chr7 31642176 + Exonic hg38 BRCA TCGA-AN-A0FV-01A 40 216 Out-of-frame Intra-chr p13 p14.3 Seq+ 84226 ChimerSeq TCGA FAWG TCGA_RNA-Seq STX16-MYT1 STX16 chr20 58652087 + MYT1 chr20 64190063 + Exonic hg38 BRCA TCGA-AN-A0FV-01A 31 155 CDS-3'UTR Intra-chr q13.32 Other:WEE Transcription factor Seq+ 84227 ChimerSeq TCGA FAWG TCGA_RNA-Seq THRSP-KCTD14 THRSP chr11 78064341 + KCTD14 chr11 78017270 - Exonic hg38 BRCA TCGA-AN-A0FV-01A 19 68 3'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 84228 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK12-NUFIP2 CDK12 chr17 39556413 + NUFIP2 chr17 29267530 - Exonic hg38 BRCA TCGA-AN-A0FV-01A 5 54 3'UTR-CDS Intra-chr q12 Oncogene q11.2 84229 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLM-OGDH POLM chr7 44073625 - OGDH chr7 44700141 + Exonic hg38 BRCA TCGA-AN-A0FV-01A 6 43 In-Frame Intra-chr p13 p13 Seq+ 84230 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPF2-SEZ6 WIPF2 chr17 40219492 + SEZ6 chr17 28982039 - Exonic hg38 BRCA TCGA-AN-A0FV-01A 8 28 5'UTR-5'UTR Intra-chr q21.2 q11.2 Seq+ 84231 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXNB2-DLG2 PLXNB2 chr22 50294719 - DLG2 chr11 83980642 - Exonic hg38 BRCA TCGA-AN-A0FV-01A 3 31 5'UTR-CDS Inter-chr q13.33 q14.1 Seq+ 84232 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO18A-ZBTB46 MYO18A chr17 29165942 - ZBTB46 chr20 63790790 - Exonic hg38 BRCA TCGA-AN-A0FV-01A 5 9 CDS-5'UTR Inter-chr q11.2 Oncogene q13.33 Transcription factor Seq+ 84233 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKN2-COL24A1 PKN2 chr1 88684628 + COL24A1 chr1 85987654 - Exonic hg38 BRCA TCGA-AN-A0FV-01A 2 6 In-Frame Intra-chr p22.2 AGC:PKN p22.3 Seq+ 84234 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-CASS4 FBXL20 chr17 39401361 - CASS4 chr20 56445900 + Exonic hg38 BRCA TCGA-AN-A0FV-01A 2 3 In-Frame Inter-chr q12 q13.31 Seq+ 84235 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGLS-GTPBP3 PGLS chr19 17517850 + GTPBP3 chr19 17341478 + Exonic hg38 BRCA TCGA-AN-A0FV-01A 2 3 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 84236 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX42-DCAF7 DDX42 chr17 63774376 + DCAF7 chr17 63578470 + Exonic hg38 BRCA TCGA-AN-A0FW-01A 8 83 5'UTR-5'UTR Intra-chr q23.3 q23.3 Seq+ 84237 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUPT4H1-PSMD12 SUPT4H1 chr17 58351402 - PSMD12 chr17 67345857 - Exonic hg38 BRCA TCGA-AN-A0FW-01A 11 63 Out-of-frame Intra-chr q22 q24.2 Seq+ 84238 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZPLD1-NXPE3 ZPLD1 chr3 102229341 + NXPE3 chr3 101816795 + Exonic hg38 BRCA TCGA-AN-A0FW-01A 5 29 5'UTR-5'UTR Intra-chr q12.3 q12.3 Seq+ 84239 ChimerSeq TCGA FAWG TCGA_RNA-Seq UQCR11-CERS4 UQCR11 chr19 1605360 - CERS4 chr19 8206754 + Exonic hg38 BRCA TCGA-AN-A0FW-01A 3 34 CDS-5'UTR Intra-chr p13.3 p13.2 Seq+ 84240 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB2-SYNE1 ZBTB2 chr6 151373465 - SYNE1 chr6 152249262 - Exonic hg38 BRCA TCGA-AN-A0FW-01A 5 20 Out-of-frame Intra-chr q25.1 Transcription factor q25.2 Oncogene Seq+ 84241 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOGA1-MROH8 SOGA1 chr20 36862658 - MROH8 chr20 37110355 - Exonic hg38 BRCA TCGA-AN-A0FW-01A 1 17 In-Frame Intra-chr q11.23 q11.23 Seq+ 84242 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFAND1-PAG1 ZFAND1 chr8 81713918 - PAG1 chr8 81070170 - Exonic hg38 BRCA TCGA-AN-A0FW-01A 4 5 CDS-5'UTR Intra-chr q21.13 q21.13 84243 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDZD7-TLX1NB PDZD7 chr10 101029994 - TLX1NB chr10 101127098 - Exonic hg38 BRCA TCGA-AN-A0FW-01A 2 10 CDS-3'UTR Intra-chr q24.31 q24.31 Seq+ 84244 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEDD4-RFX7 NEDD4 chr15 55966473 - RFX7 chr15 56087509 - Exonic hg38 BRCA TCGA-AN-A0FW-01A 1 11 Out-of-frame Intra-chr q21.3 Tumor suppressor gene q21.3 Transcription factor Seq+ 84245 ChimerSeq TCGA FAWG TCGA_RNA-Seq POGZ-THEM4 POGZ chr1 151427823 - THEM4 chr1 151895194 - Exonic hg38 BRCA TCGA-AN-A0FW-01A 1 7 Out-of-frame Intra-chr q21.3 q21.3 84246 ChimerSeq TCGA FAWG TCGA_RNA-Seq WTIP-KIAA0355 WTIP chr19 34493622 + KIAA0355 chr19 34299679 + Exonic hg38 BRCA TCGA-AN-A0FW-01A 1 6 CDS-3'UTR Intra-chr q13.11 Seq+ 84247 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM9SF3-PIK3AP1 TM9SF3 chr10 96586734 - PIK3AP1 chr10 96616711 - Exonic hg38 BRCA TCGA-AN-A0FX-01A 78 27 In-Frame Intra-chr q24.1 q24.1 Seq+ 84248 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD8-RAB2B CHD8 chr14 21456032 - RAB2B chr14 21468752 - Exonic hg38 BRCA TCGA-AN-A0FX-01A 6 18 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 84249 ChimerSeq TCGA FAWG TCGA_RNA-Seq GGT6-PELP1 GGT6 chr17 4560382 - PELP1 chr17 4676812 - Exonic hg38 BRCA TCGA-AN-A0FX-01A 5 16 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 84250 ChimerSeq TCGA FAWG TCGA_RNA-Seq PYCR1-NOTUM PYCR1 chr17 81935337 - NOTUM chr17 81958995 - Exonic hg38 BRCA TCGA-AN-A0FX-01A 4 19 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 84251 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPAMD8-SAP18 CPAMD8 chr19 16896176 - SAP18 chr13 21146805 + Exonic hg38 BRCA TCGA-AN-A0FX-01A 5 9 In-Frame Inter-chr p13.11 q12.11 Seq+ 84252 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNA1C-WNT5B CACNA1C chr12 2120430 + WNT5B chr12 1631298 + Exonic hg38 BRCA TCGA-AN-A0FX-01A 2 18 3'UTR-5'UTR Intra-chr p13.33 p13.33 Seq+ 84253 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRM2-RREB1 RRM2 chr2 10129154 + RREB1 chr6 7176655 + Exonic hg38 BRCA TCGA-AN-A0FX-01A 2 5 5'UTR-5'UTR Inter-chr p25.1 p24.3 Transcription factor Seq+ 84254 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL7A1-UQCRC1 COL7A1 chr3 48582323 - UQCRC1 chr3 48601467 - Exonic hg38 BRCA TCGA-AN-A0FX-01A 1 3 Out-of-frame Intra-chr p21.31 p21.31 84255 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIAPH3-TDRD3 DIAPH3 chr13 60093628 - TDRD3 chr13 60567525 + Exonic hg38 BRCA TCGA-AN-A0FY-01A 45 228 In-Frame Intra-chr q21.2 q21.2 Seq+ 84256 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYCP2-BCAS1 SYCP2 chr20 59865388 - BCAS1 chr20 53957497 - Exonic hg38 BRCA TCGA-AN-A0FY-01A 3 28 In-Frame Intra-chr q13.33 q13.2 Seq+ 84257 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2C-CDH26 UBE2C chr20 45814470 + CDH26 chr20 59968967 + Exonic hg38 BRCA TCGA-AN-A0FY-01A 4 20 In-Frame Intra-chr q13.12 q13.33 Seq+ 84258 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHR-CDK14 AHR chr7 17299329 + CDK14 chr7 91112542 + Exonic hg38 BRCA TCGA-AN-A0FY-01A 1 5 In-Frame Intra-chr p21.1 Tumor suppressor gene Transcription factor q21.13 Seq+ 84259 ChimerSeq TCGA FAWG TCGA_RNA-Seq TDRD3-DIAPH3 TDRD3 chr13 60510755 + DIAPH3 chr13 59924870 - Exonic hg38 BRCA TCGA-AN-A0FY-01A 1 3 In-Frame Intra-chr q21.2 q21.2 Seq+ 84260 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAA38-RABEP1 NAA38 chr17 7883236 - RABEP1 chr17 5381388 + Exonic hg38 BRCA TCGA-AN-A0FY-01A 1000 1000 Out-of-frame Intra-chr p13.1 p13.2 84261 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRIP1-HIBADH NRIP1 chr21 15014344 - HIBADH chr7 27531348 - Exonic hg38 BRCA TCGA-AN-A0FZ-01A 324 1812 5'UTR-CDS Inter-chr q21.1 p15.2 Seq+ 84262 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPSF6-MDM1 CPSF6 chr12 69262562 + MDM1 chr12 68295366 - Exonic hg38 BRCA TCGA-AN-A0FZ-01A 32 192 3'UTR-CDS Intra-chr q15 q15 Seq+ 84263 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL8-TSHZ2 OSBPL8 chr12 76450851 - TSHZ2 chr20 53487144 + Exonic hg38 BRCA TCGA-AN-A0FZ-01A 3 97 CDS-3'UTR Inter-chr q21.2 q13.2 Transcription factor Seq+ 84264 ChimerSeq TCGA FAWG TCGA_RNA-Seq SELENOF-COL24A1 SELENOF chr1 86880662 - COL24A1 chr1 85737505 - Exonic hg38 BRCA TCGA-AN-A0FZ-01A 5 34 In-Frame Intra-chr p22.3 p22.3 84265 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKAP2-SCIN SKAP2 chr7 26844030 - SCIN chr7 12578064 + Exonic hg38 BRCA TCGA-AN-A0FZ-01A 8 17 In-Frame Intra-chr p15.2 p21.3 Seq+ 84266 ChimerSeq TCGA FAWG TCGA_RNA-Seq HS2ST1-GBP6 HS2ST1 chr1 86915160 + GBP6 chr1 89368529 + Exonic hg38 BRCA TCGA-AN-A0FZ-01A 4 26 CDS-5'UTR Intra-chr p22.3 p22.2 Seq+ 84267 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM44-SLC5A12 TRIM44 chr11 35806442 + SLC5A12 chr11 26712706 - Exonic hg38 BRCA TCGA-AN-A0FZ-01A 6 17 3'UTR-CDS Intra-chr p13 p14.2 Seq+ 84268 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCSK6-LINS1 PCSK6 chr15 101443556 - LINS1 chr15 100574241 - Exonic hg38 BRCA TCGA-AN-A0FZ-01A 6 15 Out-of-frame Intra-chr q26.3 q26.3 84269 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-MDM1 FRS2 chr12 69532056 + MDM1 chr12 68331221 - Exonic hg38 BRCA TCGA-AN-A0FZ-01A 6 14 5'UTR-5'UTR Intra-chr q15 q15 Seq+ 84270 ChimerSeq TCGA FAWG TCGA_RNA-Seq NARFL-RBBP6 NARFL chr16 740920 - RBBP6 chr16 24546163 + Exonic hg38 BRCA TCGA-AN-A0FZ-01A 7 10 Out-of-frame Intra-chr p13.3 p12.1 Seq+ 84271 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD42-RHOD ANKRD42 chr11 83248087 + RHOD chr11 67070425 + Exonic hg38 BRCA TCGA-AN-A0FZ-01A 5 12 In-Frame Intra-chr q14.1 q13.2 Seq+ 84272 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMS1-PLEKHA7 BMS1 chr10 42802218 + PLEKHA7 chr11 16871182 - Exonic hg38 BRCA TCGA-AN-A0FZ-01A 3 9 Out-of-frame Inter-chr q11.21 p15.1 Seq+ 84273 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNRF2-VANGL1 ZNRF2 chr7 30323737 + VANGL1 chr1 115682364 + Exonic hg38 BRCA TCGA-AN-A0FZ-01A 2 3 Out-of-frame Inter-chr p14.3 p13.1 Seq+ 84274 ChimerSeq TCGA FAWG TCGA_RNA-Seq BACH1-TTC3 BACH1 chr21 29329693 + TTC3 chr21 37121817 + Exonic hg38 BRCA TCGA-AN-A0FZ-01A 1 3 In-Frame Intra-chr q21.3 Transcription factor q22.13 84275 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC15-UFM1 DNAJC15 chr13 43023734 + UFM1 chr13 38349999 + Exonic hg38 BRCA TCGA-AN-A0FZ-01A 1 1 Out-of-frame Intra-chr q14.11 q13.3 84276 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZPLD1-NXPE3 ZPLD1 chr3 102229341 + NXPE3 chr3 101782110 + Exonic hg38 BRCA TCGA-AN-A0FZ-01A 1 1 5'UTR-5'UTR Intra-chr q12.3 q12.3 Seq+ 84277 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACER3-NARS2 ACER3 chr11 76861079 + NARS2 chr11 78469313 - Exonic hg38 BRCA TCGA-AN-A0G0-01A 97 295 Out-of-frame Intra-chr q13.5 q14.1 Seq+ 84278 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTN2-CHRM3 ACTN2 chr1 236686799 + CHRM3 chr1 239632224 + Exonic hg38 BRCA TCGA-AN-A0G0-01A 14 111 5'UTR-5'UTR Intra-chr q43 q43 Seq+ 84279 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIX-RAD23A NFIX chr19 13078735 + RAD23A chr19 12947848 + Exonic hg38 BRCA TCGA-AN-A0G0-01A 1 14 Out-of-frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 84280 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRDM16-NARS2 PRDM16 chr1 3069296 + NARS2 chr11 78571444 - Exonic hg38 BRCA TCGA-AN-A0G0-01A 2 10 Out-of-frame Inter-chr p36.32 Transcription factor q14.1 Seq+ 84281 ChimerSeq TCGA FAWG TCGA_RNA-Seq NARS2-PAK1 NARS2 chr11 78478585 - PAK1 chr11 77392541 - Exonic hg38 BRCA TCGA-AN-A0G0-01A 1 12 CDS-5'UTR Intra-chr q14.1 q14.1 STE:STE20 Seq+ 84282 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC19A2-F5 SLC19A2 chr1 169468111 - F5 chr1 169528094 - Exonic hg38 BRCA TCGA-AN-A0G0-01A 1 7 Out-of-frame Intra-chr q24.2 q24.2 84283 ChimerSeq TCGA FAWG TCGA_RNA-Seq EWSR1-SMR3B EWSR1 chr22 29299835 + SMR3B chr4 70389907 + Exonic hg38 BRCA TCGA-AN-A0G0-01A 1000 1000 Out-of-frame Inter-chr q12.2 q13.3 84284 ChimerSeq TCGA FAWG TCGA_RNA-Seq MUC5B-SMR3B MUC5B chr11 1261468 + SMR3B chr4 70389992 + Exonic hg38 BRCA TCGA-AN-A0G0-01A 1000 1000 Out-of-frame Inter-chr p15.5 q13.3 84285 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC61A1-SMR3B SEC61A1 chr3 128071236 + SMR3B chr4 70389858 + Exonic hg38 BRCA TCGA-AN-A0G0-01A 1000 1000 Out-of-frame Inter-chr q21.3 q13.3 84286 ChimerSeq TCGA FAWG TCGA_RNA-Seq COX20-SMR3B COX20 chr1 244844728 + SMR3B chr4 70389856 + Exonic hg38 BRCA TCGA-AN-A0G0-01A 1000 1000 Out-of-frame Inter-chr q44 q13.3 84287 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR2A-SMR3B POLR2A chr17 7513917 + SMR3B chr4 70390007 + Exonic hg38 BRCA TCGA-AN-A0G0-01A 1000 1000 Out-of-frame Inter-chr p13.1 q13.3 84288 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPSF6-SMR3B CPSF6 chr12 69258913 + SMR3B chr4 70389967 + Exonic hg38 BRCA TCGA-AN-A0G0-01A 1000 1000 Out-of-frame Inter-chr q15 q13.3 84289 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNASE2-SMR3B DNASE2 chr19 12878504 - SMR3B chr4 70389846 + Exonic hg38 BRCA TCGA-AN-A0G0-01A 1000 1000 Out-of-frame Inter-chr p13.13 q13.3 84290 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIPA1L3-LSM14A SIPA1L3 chr19 38029156 + LSM14A chr19 34215124 + Exonic hg38 BRCA TCGA-AN-A0XN-01A 4 8 5'UTR-3'UTR Intra-chr q13.13 Seq+ 84291 ChimerSeq TCGA FAWG TCGA_RNA-Seq LTBP1-CDH23 LTBP1 chr2 33222151 + CDH23 chr10 71510082 + Exonic hg38 BRCA TCGA-AN-A0XN-01A 4 6 In-Frame Inter-chr p22.3 q22.1 Seq+ 84292 ChimerSeq TCGA FAWG TCGA_RNA-Seq LINC-RSBN1L LINC chr7 131107720 - RSBN1L chr7 77749424 + Exonic hg38 BRCA TCGA-AN-A0XN-01A 3 4 Out-of-frame Intra-chr q11.23 84293 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM160A1-DDX60 FAM160A1 chr4 151482648 + DDX60 chr4 168225676 - Exonic hg38 BRCA TCGA-AN-A0XN-01A 2 6 5'UTR-CDS Intra-chr q31.3 q32.3 Seq+ 84294 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPID-SFRP2 PPID chr4 158719180 - SFRP2 chr4 153781755 - Exonic hg38 BRCA TCGA-AN-A0XN-01A 1 9 Out-of-frame Intra-chr q32.1 q31.3 Tumor suppressor gene 84295 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH23-LTBP1 CDH23 chr10 71446395 + LTBP1 chr2 33243662 + Exonic hg38 BRCA TCGA-AN-A0XN-01A 1 8 In-Frame Inter-chr q22.1 p22.3 84296 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGPAT3-NAALADL2 AGPAT3 chr21 43904019 + NAALADL2 chr3 175803005 + Exonic hg38 BRCA TCGA-AN-A0XN-01A 2 3 5'UTR-CDS Inter-chr q22.3 q26.31 Seq+ 84297 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D12-MORN4 TBC1D12 chr10 94474783 + MORN4 chr10 97619683 - Exonic hg38 BRCA TCGA-AN-A0XN-01A 2 3 CDS-5'UTR Intra-chr q23.33 q24.2 Seq+ 84298 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITSN2-ATRNL1 ITSN2 chr2 24360304 - ATRNL1 chr10 115519263 + Exonic hg38 BRCA TCGA-AN-A0XN-01A 1 2 5'UTR-CDS Inter-chr p23.3 q25.3 84299 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL1A-LETM2 OSBPL1A chr18 24397655 - LETM2 chr8 38400272 + Exonic hg38 BRCA TCGA-AN-A0XO-01A 2 11 5'UTR-CDS Inter-chr q11.2 p11.23 Seq+ 84300 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRCH1-TBC1D31 LRCH1 chr13 46553703 + TBC1D31 chr8 123144717 + Exonic hg38 BRCA TCGA-AN-A0XO-01A 1 4 Out-of-frame Inter-chr q14.13 q24.13 84301 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF122-NSD3 RNF122 chr8 33566699 - NSD3 chr8 38348215 - Exonic hg38 BRCA TCGA-AN-A0XO-01A 1 4 CDS-5'UTR Intra-chr p12 p11.23 Tumor suppressor gene 84302 ChimerSeq TCGA FAWG TCGA_RNA-Seq ULK2-DOCK6 ULK2 chr17 19838501 - DOCK6 chr19 11253726 - Exonic hg38 BRCA TCGA-AN-A0XT-01A 6 18 Out-of-frame Inter-chr p11.2 Other:ULK p13.2 Seq+ 84303 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHPS-HOOK2 DHPS chr19 12681518 - HOOK2 chr19 12767424 - Exonic hg38 BRCA TCGA-AN-A0XT-01A 5 2 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 84304 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALAS1-HHEX ALAS1 chr3 52208211 + HHEX chr10 92690189 + Exonic hg38 BRCA TCGA-AN-A0XT-01A 3 1 Out-of-frame Inter-chr p21.2 q23.33 Transcription factor Seq+ 84305 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPGS1-PRKACA TPGS1 chr19 507844 + PRKACA chr19 14093237 - Exonic hg38 BRCA TCGA-AN-A0XT-01A 1 9 Out-of-frame Intra-chr p13.3 p13.12 84306 ChimerSeq TCGA FAWG TCGA_RNA-Seq ULK2-MBD3 ULK2 chr17 19843121 - MBD3 chr19 1585214 - Exonic hg38 BRCA TCGA-AN-A0XT-01A 1 6 Out-of-frame Inter-chr p11.2 Other:ULK p13.3 Transcription factor Seq+ 84307 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A10-HGS SLC25A10 chr17 81716050 + HGS chr17 81700467 + Exonic hg38 BRCA TCGA-AN-A0XU-01A 21 24 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 84308 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS23-CUEDC1 MRPS23 chr17 57849967 - CUEDC1 chr17 57868243 - Exonic hg38 BRCA TCGA-AN-A0XU-01A 6 41 Out-of-frame Intra-chr q22 q22 Seq+ 84309 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAT10-CAPRIN1 NAT10 chr11 34108833 + CAPRIN1 chr11 34096479 + Exonic hg38 BRCA TCGA-AN-A0XU-01A 8 26 Out-of-frame Intra-chr p13 p13 Seq+ 84310 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABTB2-ATXN3 ABTB2 chr11 34356701 - ATXN3 chr14 92096838 - Exonic hg38 BRCA TCGA-AN-A0XU-01A 2 8 Out-of-frame Inter-chr p13 q32.12 Seq+ 84311 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACHD1-RNF2 CACHD1 chr1 64682106 + RNF2 chr1 185087552 + Exonic hg38 BRCA TCGA-AN-A0XU-01A 3 4 CDS-5'UTR Intra-chr p31.3 q25.3 Oncogene Seq+ 84312 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELMOD3-TTC27 ELMOD3 chr2 85362260 + TTC27 chr2 32702807 + Exonic hg38 BRCA TCGA-AN-A0XU-01A 2 5 In-Frame Intra-chr p11.2 p22.3 Seq+ 84313 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHYHD1-LRRC8A PHYHD1 chr9 128927196 + LRRC8A chr9 128916096 + Exonic hg38 BRCA TCGA-AN-A0XU-01A 2 5 In-Frame Intra-chr q34.11 q34.11 Seq+ 84314 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKAG2-CA10 PRKAG2 chr7 151632069 - CA10 chr17 52072393 - Exonic hg38 BRCA TCGA-AN-A0XU-01A 2 5 In-Frame Inter-chr q36.1 q22 Seq+ 84315 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF2-CACHD1 RNF2 chr1 185045649 + CACHD1 chr1 64671564 + Exonic hg38 BRCA TCGA-AN-A0XU-01A 1 7 5'UTR-CDS Intra-chr q25.3 Oncogene p31.3 84316 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABTB2-NDUFB1 ABTB2 chr11 34356701 - NDUFB1 chr14 92116229 - Exonic hg38 BRCA TCGA-AN-A0XU-01A 1 6 Out-of-frame Inter-chr p13 q32.12 Seq+ 84317 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGB6-COMMD1 ITGB6 chr2 160169212 - COMMD1 chr2 62135831 + Exonic hg38 BRCA TCGA-AN-A0XU-01A 1 6 In-Frame Intra-chr q24.2 p15 84318 ChimerSeq TCGA FAWG TCGA_RNA-Seq JADE3-MTA3 JADE3 chrX 46998277 + MTA3 chr2 42682401 + Exonic hg38 BRCA TCGA-AN-A0XU-01A 2 1 Out-of-frame Inter-chr p11.3 p21 84319 ChimerSeq TCGA FAWG TCGA_RNA-Seq ORC2-ALS2CR12 ORC2 chr2 200925836 - ALS2CR12 chr2 201309250 - Exonic hg38 BRCA TCGA-AN-A0XU-01A 1 5 Out-of-frame Intra-chr q33.1 q33.1 Seq+ 84320 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2Q2-METTL6 UBE2Q2 chr15 75854487 + METTL6 chr3 15439388 - Exonic hg38 BRCA TCGA-AN-A0XU-01A 1 3 CDS-5'UTR Inter-chr q24.2 p25.1 84321 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF19A-COX6C RNF19A chr8 100309867 - COX6C chr8 99892052 - Exonic hg38 BRCA TCGA-AN-A0XV-01A 6 1131 5'UTR-5'UTR Intra-chr q22.2 q22.2 Seq+ 84322 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A32-LAPTM4B SLC25A32 chr8 103414784 - LAPTM4B chr8 97851397 + Exonic hg38 BRCA TCGA-AN-A0XV-01A 32 115 Out-of-frame Intra-chr q22.3 q22.1 Seq+ 84323 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPD52-COPS5 TPD52 chr8 80171425 - COPS5 chr8 67059445 - Exonic hg38 BRCA TCGA-AN-A0XV-01A 33 98 Out-of-frame Intra-chr q21.13 q13.1 Seq+ 84324 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE7A-NKAIN3 PDE7A chr8 65841371 - NKAIN3 chr8 62579539 + Exonic hg38 BRCA TCGA-AN-A0XV-01A 4 41 In-Frame Intra-chr q13.1 q12.3 Seq+ 84325 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD46-PDC CD46 chr1 207752309 + PDC chr1 186449483 - Exonic hg38 BRCA TCGA-AN-A0XV-01A 2 4 CDS-5'UTR Intra-chr q32.2 q31.1 84326 ChimerSeq TCGA FAWG TCGA_RNA-Seq VCPIP1-CDH17 VCPIP1 chr8 66651458 - CDH17 chr8 94165976 - Exonic hg38 BRCA TCGA-AN-A0XV-01A 2 4 In-Frame Intra-chr q13.1 q22.1 Tumor suppressor gene 84327 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH1L-GPATCH4 ASH1L chr1 155347656 - GPATCH4 chr1 156599104 - Exonic hg38 BRCA TCGA-AN-A0XV-01A 1 2 CDS-5'UTR Intra-chr q22 Transcription factor q23.1 Seq+ 84328 ChimerSeq TCGA FAWG TCGA_RNA-Seq PREP-TPCN2 PREP chr6 105402847 - TPCN2 chr11 69135435 + Exonic hg38 BRCA TCGA-AN-A0XW-01A 9 32 CDS-3'UTR Inter-chr q21 q13.3 84329 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-RAD51C BCAS3 chr17 60808076 + RAD51C chr17 58724040 + Exonic hg38 BRCA TCGA-AN-A0XW-01A 5 31 Out-of-frame Intra-chr q23.2 q22 Tumor suppressor gene Seq+ 84330 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSH2-TNFAIP1 SSH2 chr17 29793894 - TNFAIP1 chr17 28339408 + Exonic hg38 BRCA TCGA-AN-A0XW-01A 3 22 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 84331 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFWD2-SRGAP2 RFWD2 chr1 176206572 - SRGAP2 chr1 206458623 + Exonic hg38 BRCA TCGA-AN-A0XW-01A 4 9 Out-of-frame Intra-chr q25.2 Tumor suppressor gene q32.1 Tumor suppressor gene Seq+ 84332 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSRP1-SKAP1 NSRP1 chr17 30116863 + SKAP1 chr17 48396785 - Exonic hg38 BRCA TCGA-AN-A0XW-01A 4 6 Out-of-frame Intra-chr q11.2 q21.32 Seq+ 84333 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTLC3-MRPL45P2 SPTLC3 chr20 13126717 + MRPL45P2 chr17 47456793 - Exonic hg38 BRCA TCGA-AN-A0XW-01A 3 5 CDS-3'UTR Inter-chr p12.1 q21.32 Seq+ 84334 ChimerSeq TCGA FAWG TCGA_RNA-Seq EAF2-RGS9 EAF2 chr3 121835391 + RGS9 chr17 65225002 + Exonic hg38 BRCA TCGA-AO-A03L-01A 101 341 Out-of-frame Inter-chr q13.33 Tumor suppressor gene q24.1 Seq+ 84335 ChimerSeq TCGA FAWG TCGA_RNA-Seq IQCB1-CACNG4 IQCB1 chr3 121834391 - CACNG4 chr17 67018189 + Exonic hg38 BRCA TCGA-AO-A03L-01A 42 197 5'UTR-CDS Inter-chr q13.33 q24.2 Seq+ 84336 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF587B-ZSCAN4 ZNF587B chr19 57819945 + ZSCAN4 chr19 57670245 + Exonic hg38 BRCA TCGA-AO-A03L-01A 7 49 5'UTR-5'UTR Intra-chr q13.43 Transcription factor q13.43 Transcription factor Seq+ 84337 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGB5-PARP14 ITGB5 chr3 124769013 - PARP14 chr3 122708190 + Exonic hg38 BRCA TCGA-AO-A03L-01A 11 19 Out-of-frame Intra-chr q21.2 q21.1 Seq+ 84338 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL2-EDEM2 OSBPL2 chr20 62256221 + EDEM2 chr20 35142478 - Exonic hg38 BRCA TCGA-AO-A03L-01A 6 35 Out-of-frame Intra-chr q13.33 q11.22 Seq+ 84339 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF321P-ERGIC3 ZNF321P chr19 52942541 - ERGIC3 chr20 35542323 + Exonic hg38 BRCA TCGA-AO-A03L-01A 12 10 3'UTR-CDS Inter-chr q13.41 q11.22 Seq+ 84340 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC2-WFDC21P TANC2 chr17 63319090 + WFDC21P chr17 60085203 - Exonic hg38 BRCA TCGA-AO-A03L-01A 4 32 CDS-3'UTR Intra-chr q23.2 q23.1 84341 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMSS1-TBKBP1 CMSS1 chr3 99818043 + TBKBP1 chr17 47696079 + Exonic hg38 BRCA TCGA-AO-A03L-01A 5 18 CDS-5'UTR Inter-chr q12.1 q21.32 Seq+ 84342 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPRG1-DGKG TPRG1 chr3 189215383 + DGKG chr3 186265306 - Exonic hg38 BRCA TCGA-AO-A03L-01A 4 4 Out-of-frame Intra-chr q28 q27.3 Seq+ 84343 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13-VMP1 MED13 chr17 61950825 - VMP1 chr17 59838295 + Exonic hg38 BRCA TCGA-AO-A03L-01A 3 7 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 84344 ChimerSeq TCGA FAWG TCGA_RNA-Seq UQCC1-CACNA2D4 UQCC1 chr20 35366557 - CACNA2D4 chr12 1810587 - Exonic hg38 BRCA TCGA-AO-A03L-01A 2 9 CDS-5'UTR Inter-chr q11.22 p13.33 84345 ChimerSeq TCGA FAWG TCGA_RNA-Seq STMN3-DGKG STMN3 chr20 63641299 - DGKG chr3 186280744 - Exonic hg38 BRCA TCGA-AO-A03L-01A 1000 1000 3'UTR-3'UTR Inter-chr q13.33 q27.3 84346 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBL1-CTNNBL1 RBL1 chr20 37088989 - CTNNBL1 chr20 37871925 + Exonic hg38 BRCA TCGA-AO-A03M-01B 51 113 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 84347 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNHG17-BCAS1 SNHG17 chr20 38426419 - BCAS1 chr20 53996050 - Exonic hg38 BRCA TCGA-AO-A03M-01B 19 118 3'UTR-CDS Intra-chr q11.23 q13.2 Seq+ 84348 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-SNX11 FBXL20 chr17 39343180 - SNX11 chr17 48119011 + Exonic hg38 BRCA TCGA-AO-A03M-01B 10 34 In-Frame Intra-chr q12 q21.32 84349 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMHD1-DDX27 SAMHD1 chr20 36897822 - DDX27 chr20 49236333 + Exonic hg38 BRCA TCGA-AO-A03M-01B 6 34 In-Frame Intra-chr q11.23 q13.13 Seq+ 84350 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF217-ZNFX1 ZNF217 chr20 53575727 - ZNFX1 chr20 49239300 - Exonic hg38 BRCA TCGA-AO-A03M-01B 2 3 CDS-3'UTR Intra-chr q13.2 Oncogene Transcription factor q13.13 84351 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNNBL1-TSHZ2 CTNNBL1 chr20 37803048 + TSHZ2 chr20 53253499 + Exonic hg38 BRCA TCGA-AO-A03M-01B 1 4 In-Frame Intra-chr q11.23 q13.2 Transcription factor 84352 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP8B1-NARS ATP8B1 chr18 57731627 - NARS chr18 57611707 - Exonic hg38 BRCA TCGA-AO-A03O-01A 44 143 In-Frame Intra-chr q21.31 q21.31 Seq+ 84353 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIO-IFT52 TRIO chr5 14502657 + IFT52 chr20 43603760 + Exonic hg38 BRCA TCGA-AO-A03O-01A 6 14 Out-of-frame Inter-chr p15.2 q13.12 Seq+ 84354 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS26A-GDAP1L1 VPS26A chr10 69133047 + GDAP1L1 chr20 44263230 + Exonic hg38 BRCA TCGA-AO-A03O-01A 4 20 Out-of-frame Inter-chr q22.1 q13.12 Seq+ 84355 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB2-CD24 GRB2 chr17 75319744 - CD24 chr6 106970532 - Exonic hg38 BRCA TCGA-AO-A03O-01A 3 14 Out-of-frame Inter-chr q25.1 q21 Seq+ 84356 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF107-FAM83D ZNF107 chr7 64691960 + FAM83D chr20 38941959 + Exonic hg38 BRCA TCGA-AO-A03O-01A 3 12 Out-of-frame Inter-chr q11.21 Transcription factor q11.23 Seq+ 84357 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFX3-RELB RFX3 chr9 3395472 - RELB chr19 45025329 + Exonic hg38 BRCA TCGA-AO-A03O-01A 2 12 Out-of-frame Inter-chr p24.2 Transcription factor q13.32 Transcription factor Seq+ 84358 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBK1-ARHGAP5 TBK1 chr12 64455957 + ARHGAP5 chr14 32117140 + Exonic hg38 BRCA TCGA-AO-A03O-01A 2 2 In-Frame Inter-chr q14.2 Other:IKK q12 Seq+ 84359 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBCD-CPM TBCD chr17 82814934 + CPM chr12 68885889 - Exonic hg38 BRCA TCGA-AO-A03O-01A 1 3 5'UTR-CDS Inter-chr q15 84360 ChimerSeq TCGA FAWG TCGA_RNA-Seq THSD4-ALDH1A2 THSD4 chr15 71411823 + ALDH1A2 chr15 58014281 - Exonic hg38 BRCA TCGA-AO-A03P-01A 38 239 In-Frame Intra-chr q23 q21.3 Tumor suppressor gene Seq+ 84361 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB27A-SQRDL RAB27A chr15 55270165 - SQRDL chr15 45676101 + Exonic hg38 BRCA TCGA-AO-A03P-01A 35 75 Out-of-frame Intra-chr q21.3 Seq+ 84362 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS37C-SLC3A2 VPS37C chr11 61161391 - SLC3A2 chr11 62884457 + Exonic hg38 BRCA TCGA-AO-A03P-01A 29 76 5'UTR-5'UTR Intra-chr q12.2 q12.3 Seq+ 84363 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICU1-TSPAN3 MICU1 chr10 72533746 - TSPAN3 chr15 77056255 - Exonic hg38 BRCA TCGA-AO-A03P-01A 18 36 In-Frame Inter-chr q22.1 q24.3 Seq+ 84364 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF564-WIZ ZNF564 chr19 12551330 - WIZ chr19 15427533 - Exonic hg38 BRCA TCGA-AO-A03P-01A 12 38 Out-of-frame Intra-chr p13.2 Transcription factor p13.12 Transcription factor Seq+ 84365 ChimerSeq TCGA FAWG TCGA_RNA-Seq ICE2-CIB1 ICE2 chr15 60442416 - CIB1 chr15 90233703 - Exonic hg38 BRCA TCGA-AO-A03P-01A 7 57 Out-of-frame Intra-chr q22.2 q26.1 84366 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADK-TTC23 ADK chr10 74176886 + TTC23 chr15 99228732 - Exonic hg38 BRCA TCGA-AO-A03P-01A 9 36 5'UTR-5'UTR Inter-chr q22.2 q26.3 Seq+ 84367 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZSCAN29-MGMT ZSCAN29 chr15 43369596 - MGMT chr10 129707895 + Exonic hg38 BRCA TCGA-AO-A03P-01A 11 25 Out-of-frame Inter-chr q15.3 Transcription factor q26.3 Seq+ 84368 ChimerSeq TCGA FAWG TCGA_RNA-Seq C10orf11-CYP2C19 C10orf11 chr10 75438494 + CYP2C19 chr10 94849917 + Exonic hg38 BRCA TCGA-AO-A03P-01A 13 7 Out-of-frame Intra-chr q23.33 Oncogene Seq+ 84369 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM149B1-KCNMA1 FAM149B1 chr10 73210438 + KCNMA1 chr10 77019099 - Exonic hg38 BRCA TCGA-AO-A03P-01A 9 23 Out-of-frame Intra-chr q22.2 q22.3 Seq+ 84370 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBLD-LRRC28 PBLD chr10 68288483 - LRRC28 chr15 99255898 + Exonic hg38 BRCA TCGA-AO-A03P-01A 9 23 CDS-5'UTR Inter-chr q21.3 q26.3 Seq+ 84371 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP8-TRPM7 USP8 chr15 50424514 + TRPM7 chr15 50583159 - Exonic hg38 BRCA TCGA-AO-A03P-01A 4 29 5'UTR-CDS Intra-chr q21.2 q21.2 Seq+ 84372 ChimerSeq TCGA FAWG TCGA_RNA-Seq INPP5A-FAM149B1 INPP5A chr10 132749845 + FAM149B1 chr10 73239312 + Exonic hg38 BRCA TCGA-AO-A03P-01A 6 18 In-Frame Intra-chr q26.3 q22.2 Seq+ 84373 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRID1-PGPEP1L GRID1 chr10 86138819 - PGPEP1L chr15 98971158 - Exonic hg38 BRCA TCGA-AO-A03P-01A 4 22 In-Frame Inter-chr q23.2 q26.3 Seq+ 84374 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPG11-CAMK2G SPG11 chr15 44573547 - CAMK2G chr10 73853246 - Exonic hg38 BRCA TCGA-AO-A03P-01A 4 22 In-Frame Inter-chr q21.1 q22.2 Seq+ 84375 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALK2-NAPSA GALK2 chr15 49239367 + NAPSA chr19 50362313 - Exonic hg38 BRCA TCGA-AO-A03P-01A 3 14 Out-of-frame Inter-chr q21.1 q13.33 Seq+ 84376 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT6A-IKBKB KAT6A chr8 42048378 - IKBKB chr8 42305187 + Exonic hg38 BRCA TCGA-AO-A03P-01A 3 10 Out-of-frame Intra-chr p11.21 Oncogene p11.21 Oncogene Seq+ 84377 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL2-PLD1 OSBPL2 chr20 62263691 + PLD1 chr3 171620520 - Exonic hg38 BRCA TCGA-AO-A03P-01A 3 9 Out-of-frame Inter-chr q13.33 q26.31 Tumor suppressor gene Seq+ 84378 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBR1-SUPV3L1 UBR1 chr15 42966153 - SUPV3L1 chr10 69185987 + Exonic hg38 BRCA TCGA-AO-A03P-01A 1 14 In-Frame Inter-chr q15.2 q22.1 Seq+ 84379 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP8B4-MGMT ATP8B4 chr15 50010845 - MGMT chr10 129536241 + Exonic hg38 BRCA TCGA-AO-A03P-01A 3 4 CDS-5'UTR Inter-chr q21.2 q26.3 84380 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNDC3B-NLGN1 FNDC3B chr3 172226947 + NLGN1 chr3 174275315 + Exonic hg38 BRCA TCGA-AO-A03P-01A 2 8 Out-of-frame Intra-chr q26.31 q26.31 Seq+ 84381 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP8-AGBL1 USP8 chr15 50424514 + AGBL1 chr15 86674273 + Exonic hg38 BRCA TCGA-AO-A03P-01A 2 6 5'UTR-CDS Intra-chr q21.2 q25.3 84382 ChimerSeq TCGA FAWG TCGA_RNA-Seq JMJD1C-GABPB1 JMJD1C chr10 63465495 - GABPB1 chr15 50309798 - Exonic hg38 BRCA TCGA-AO-A03P-01A 1 9 CDS-5'UTR Inter-chr q21.3 q21.2 84383 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARFGEF2-RNF114 ARFGEF2 chr20 48922010 + RNF114 chr20 49941561 + Exonic hg38 BRCA TCGA-AO-A03P-01A 1 8 Out-of-frame Intra-chr q13.13 q13.13 84384 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF106-ADK ZNF106 chr15 42417805 - ADK chr10 74670183 + Exonic hg38 BRCA TCGA-AO-A03P-01A 1 5 Out-of-frame Inter-chr q15.1 q22.2 84385 ChimerSeq TCGA FAWG TCGA_RNA-Seq INPP5A-PPIP5K1 INPP5A chr10 132765846 + PPIP5K1 chr15 43539583 - Exonic hg38 BRCA TCGA-AO-A03P-01A 1 4 Out-of-frame Inter-chr q26.3 q15.3 84386 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM234-CCDC28B TMEM234 chr1 32214665 - CCDC28B chr1 32203879 + Exonic hg38 BRCA TCGA-AO-A03T-01A 13 55 3'UTR-CDS Intra-chr p35.2 p35.2 84387 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUSC3-SORBS3 TUSC3 chr8 15623249 + SORBS3 chr8 22563987 + Exonic hg38 BRCA TCGA-AO-A03T-01A 2 5 In-Frame Intra-chr p22 p21.3 Seq+ 84388 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAD2-CCDC26 ATAD2 chr8 123356389 - CCDC26 chr8 129352980 - Exonic hg38 BRCA TCGA-AO-A03T-01A 1 7 CDS-3'UTR Intra-chr q24.13 q24.21 84389 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXT1-TINAGL1 EXT1 chr8 118110085 - TINAGL1 chr1 31583149 + Exonic hg38 BRCA TCGA-AO-A03T-01A 1 1 In-Frame Inter-chr q24.11 Oncogene Tumor suppressor gene p35.2 84390 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 11869969 + NTRK3 chr15 87940753 - Exonic hg38 BRCA TCGA-AO-A03U-01B 32 72 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 84391 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL7A-KCNIP3 BCL7A chr12 122035427 + KCNIP3 chr2 95374296 + Exonic hg38 BRCA TCGA-AO-A03U-01B 16 42 3'UTR-CDS Inter-chr q11.1 Transcription factor Seq+ 84392 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIP12-COL6A3 TRIP12 chr2 229789611 - COL6A3 chr2 237396847 - Exonic hg38 BRCA TCGA-AO-A03U-01B 2 16 CDS-5'UTR Intra-chr q36.3 q37.3 Seq+ 84393 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSN1S1-MGP CSN1S1 chr4 69935949 + MGP chr12 14882280 - Exonic hg38 BRCA TCGA-AO-A03U-01B 1 9 Out-of-frame Inter-chr q13.3 p12.3 84394 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJB12-SLC25A16 DNAJB12 chr10 72354765 - SLC25A16 chr10 68506718 - Exonic hg38 BRCA TCGA-AO-A03V-01A 41 102 In-Frame Intra-chr q22.1 q21.3 Seq+ 84395 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF587B-SRC ZNF587B chr19 57819945 + SRC chr20 37400115 + Exonic hg38 BRCA TCGA-AO-A03V-01A 14 144 5'UTR-CDS Inter-chr q13.43 Transcription factor q11.23 TK:Src Oncogene Seq+ 84396 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAX-ALDH16A1 BAX chr19 48956333 + ALDH16A1 chr19 49460822 + Exonic hg38 BRCA TCGA-AO-A03V-01A 29 72 Out-of-frame Intra-chr q13.33 Tumor suppressor gene q13.33 Seq+ 84397 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM203-TMEM87A TMEM203 chr9 137204104 - TMEM87A chr15 42211749 - Exonic hg38 BRCA TCGA-AO-A03V-01A 29 66 3'UTR-CDS Inter-chr q34.3 q15.1 84398 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF586-SRC ZNF586 chr19 57790400 + SRC chr20 37400115 + Exonic hg38 BRCA TCGA-AO-A03V-01A 3 149 3'UTR-CDS Inter-chr q13.43 Transcription factor q11.23 TK:Src Oncogene Seq+ 84399 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPRN-TMEM87A TPRN chr9 137204104 - TMEM87A chr15 42211749 - Exonic hg38 BRCA TCGA-AO-A03V-01A 29 42 5'UTR-CDS Inter-chr q34.3 q15.1 Seq+ 84400 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA1-FAM187B PLEKHA1 chr10 122374806 + FAM187B chr19 35225212 - Exonic hg38 BRCA TCGA-AO-A03V-01A 25 30 5'UTR-CDS Inter-chr q26.13 q13.12 Seq+ 84401 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLTM-ATE1 SLTM chr15 58912563 - ATE1 chr10 121743858 - Exonic hg38 BRCA TCGA-AO-A03V-01A 13 44 Out-of-frame Inter-chr q22.1 q26.13 Seq+ 84402 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN9-CACNA1C TSPAN9 chr12 3215355 + CACNA1C chr12 2664825 + Exonic hg38 BRCA TCGA-AO-A03V-01A 15 35 CDS-3'UTR Intra-chr p13.33 p13.33 Seq+ 84403 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX16-PCCA SNX16 chr8 81842122 - PCCA chr13 100340157 + Exonic hg38 BRCA TCGA-AO-A03V-01A 1 66 5'UTR-5'UTR Inter-chr q21.13 q32.3 Seq+ 84404 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNC13B-DNER UNC13B chr9 35162305 + DNER chr2 229418230 - Exonic hg38 BRCA TCGA-AO-A03V-01A 6 40 In-Frame Inter-chr p13.3 q36.3 Seq+ 84405 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRSK1-HSPBP1 BRSK1 chr19 55284578 + HSPBP1 chr19 55266286 - Exonic hg38 BRCA TCGA-AO-A03V-01A 12 8 In-Frame Intra-chr q13.42 CAMK:CAMKL Tumor suppressor gene q13.42 Seq+ 84406 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGMS1-PARG SGMS1 chr10 50433476 - PARG chr10 49885295 - Exonic hg38 BRCA TCGA-AO-A03V-01A 11 10 5'UTR-CDS Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 84407 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB22A-NLRP5 RAB22A chr20 58359735 + NLRP5 chr19 56003736 + Exonic hg38 BRCA TCGA-AO-A03V-01A 7 19 Out-of-frame Inter-chr q13.32 q13.43 Seq+ 84408 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6R1-AURKC PPP6R1 chr19 55258435 - AURKC chr19 57232033 + Exonic hg38 BRCA TCGA-AO-A03V-01A 4 24 5'UTR-CDS Intra-chr q13.42 q13.43 Oncogene Seq+ 84409 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGMT-LGI4 MGMT chr10 129536377 + LGI4 chr19 35131860 - Exonic hg38 BRCA TCGA-AO-A03V-01A 2 11 In-Frame Inter-chr q26.3 q13.12 Seq+ 84410 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF528-ZNF8 ZNF528 chr19 52397904 + ZNF8 chr19 58294098 + Exonic hg38 BRCA TCGA-AO-A03V-01A 4 3 5'UTR-CDS Intra-chr q13.41 Transcription factor q13.43 Transcription factor 84411 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR2-CTNNA3 FGFR2 chr10 121503790 - CTNNA3 chr10 66621784 - Exonic hg38 BRCA TCGA-AO-A03V-01A 3 3 Out-of-frame Intra-chr q26.13 TK:FGFR Oncogene q21.3 Tumor suppressor gene 84412 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNNA3-MGMT CTNNA3 chr10 66621692 - MGMT chr10 129536241 + Exonic hg38 BRCA TCGA-AO-A03V-01A 2 5 CDS-5'UTR Intra-chr q21.3 Tumor suppressor gene q26.3 Seq+ 84413 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSPBP1-VRK3 HSPBP1 chr19 55274398 - VRK3 chr19 50020647 - Exonic hg38 BRCA TCGA-AO-A03V-01A 2 5 CDS-5'UTR Intra-chr q13.42 q13.33 CK1:VRK Seq+ 84414 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNAL-CSNK1E GNAL chr18 11753945 + CSNK1E chr22 38303248 - Exonic hg38 BRCA TCGA-AO-A03V-01A 1 6 Out-of-frame Inter-chr p11.21 q13.1 Seq+ 84415 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR35-MELK GPR35 chr2 240619031 + MELK chr9 36642997 + Exonic hg38 BRCA TCGA-AO-A03V-01A 1 2 Out-of-frame Inter-chr q37.3 p13.2 CAMK:CAMKL Seq+ 84416 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR3H-ENTHD1 POLR3H chr22 41540699 - ENTHD1 chr22 39862007 - Exonic hg38 BRCA TCGA-AO-A03V-01A 1000 1000 In-Frame Intra-chr q13.2 q13.1 Seq+ 84417 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIP2A-PRR4 DIP2A chr21 46490719 + PRR4 chr12 10848407 - Exonic hg38 BRCA TCGA-AO-A0J2-01A 8 373 CDS-5'UTR Inter-chr q22.3 Seq+ 84418 ChimerSeq TCGA FAWG TCGA_RNA-Seq FDFT1-NEIL2 FDFT1 chr8 11803518 + NEIL2 chr8 11783203 + Exonic hg38 BRCA TCGA-AO-A0J2-01A 20 79 5'UTR-5'UTR Intra-chr p23.1 p23.1 Seq+ 84419 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALNT3-CCDC77 B4GALNT3 chr12 460545 + CCDC77 chr12 418494 + Exonic hg38 BRCA TCGA-AO-A0J2-01A 7 7 Out-of-frame Intra-chr p13.33 p13.33 Seq+ 84420 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3HAV1-ITPKB ZC3HAV1 chr7 139064879 - ITPKB chr1 226648771 - Exonic hg38 BRCA TCGA-AO-A0J2-01A 5 12 Out-of-frame Inter-chr q34 q42.12 Seq+ 84421 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF292-FIG4 ZNF292 chr6 87155759 + FIG4 chr6 109776922 + Exonic hg38 BRCA TCGA-AO-A0J2-01A 3 19 Out-of-frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q21 Seq+ 84422 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCUB-C4BPA MCUB chr4 109560436 + C4BPA chr1 207143818 + Exonic hg38 BRCA TCGA-AO-A0J2-01A 1 24 Out-of-frame Inter-chr q25 q32.2 84423 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITPKB-ZC3HAV1 ITPKB chr1 226735527 - ZC3HAV1 chr7 139064999 - Exonic hg38 BRCA TCGA-AO-A0J2-01A 4 10 In-Frame Inter-chr q42.12 q34 Seq+ 84424 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASZ1-CROCCP2 CASZ1 chr1 10693874 - CROCCP2 chr1 16643145 - Exonic hg38 BRCA TCGA-AO-A0J2-01A 4 8 CDS-5'UTR Intra-chr p36.22 Transcription factor p36.13 84425 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM87B-MERTK TMEM87B chr2 112055756 + MERTK chr2 112028351 + Exonic hg38 BRCA TCGA-AO-A0J2-01A 4 8 Out-of-frame Intra-chr q13 q13 Seq+ 84426 ChimerSeq TCGA FAWG TCGA_RNA-Seq EVC-MGST1 EVC chr4 5783764 + MGST1 chr12 16354231 + Exonic hg38 BRCA TCGA-AO-A0J2-01A 2 12 CDS-5'UTR Inter-chr p16.2 p12.3 Seq+ 84427 ChimerSeq TCGA FAWG TCGA_RNA-Seq TGDS-DAPK1 TGDS chr13 94596051 - DAPK1 chr9 87706132 + Exonic hg38 BRCA TCGA-AO-A0J2-01A 1 7 Out-of-frame Inter-chr q32.1 q21.33 CAMK:DAPK Tumor suppressor gene Seq+ 84428 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKLE2-CHFR ANKLE2 chr12 132747832 - CHFR chr12 132833237 - Exonic hg38 BRCA TCGA-AO-A0J2-01A 1000 1000 CDS-3'UTR Intra-chr q24.33 q24.33 Tumor suppressor gene Seq+ 84429 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM2A-PPP6R3 KDM2A chr11 67121358 + PPP6R3 chr11 68596097 + Exonic hg38 BRCA TCGA-AO-A0J3-01A 56 91 Out-of-frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 84430 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCT3-SYT2 CCT3 chr1 156333547 - SYT2 chr1 202605789 - Exonic hg38 BRCA TCGA-AO-A0J3-01A 22 87 CDS-5'UTR Intra-chr q22 q32.1 Seq+ 84431 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM36-HEXB TRIM36 chr5 115169608 - HEXB chr5 74689328 + Exonic hg38 BRCA TCGA-AO-A0J3-01A 10 17 Out-of-frame Intra-chr q22.3 q13.3 Seq+ 84432 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELN-METTL2A ELN chr7 74028269 + METTL2A chr17 62440617 + Exonic hg38 BRCA TCGA-AO-A0J3-01A 5 23 Out-of-frame Inter-chr q11.23 q23.2 Seq+ 84433 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANSL1-KDM2A KANSL1 chr17 46223671 - KDM2A chr11 67121234 + Exonic hg38 BRCA TCGA-AO-A0J3-01A 2 29 5'UTR-5'UTR Inter-chr q13.2 Transcription factor 84434 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOS1AP-COLGALT2 NOS1AP chr1 162154476 + COLGALT2 chr1 183944323 - Exonic hg38 BRCA TCGA-AO-A0J3-01A 3 7 In-Frame Intra-chr q23.3 q25.3 84435 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIRREL-TMCO1 KIRREL chr1 158098083 + TMCO1 chr1 165768269 - Exonic hg38 BRCA TCGA-AO-A0J3-01A 1000 1000 Out-of-frame Intra-chr q23.1 q24.1 84436 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCK1-RAB6B NCK1 chr3 136862319 + RAB6B chr3 133841663 - Exonic hg38 BRCA TCGA-AO-A0J4-01A 6 9 5'UTR-CDS Intra-chr q22.3 q22.1 Seq+ 84437 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBA2-PEPD UBA2 chr19 34428570 + PEPD chr19 33413643 - Exonic hg38 BRCA TCGA-AO-A0J4-01A 4 10 Out-of-frame Intra-chr q13.11 q13.11 Seq+ 84438 ChimerSeq TCGA FAWG TCGA_RNA-Seq C8orf76-NKAIN3 C8orf76 chr8 123226500 - NKAIN3 chr8 62579539 + Exonic hg38 BRCA TCGA-AO-A0J4-01A 4 9 In-Frame Intra-chr q24.13 q12.3 Seq+ 84439 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABI1-CCDC7 ABI1 chr10 26768852 - CCDC7 chr10 32778977 + Exonic hg38 BRCA TCGA-AO-A0J4-01A 2 14 Out-of-frame Intra-chr p12.1 p11.22 84440 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRAMD1A-CCDC88A GRAMD1A chr19 35000486 + CCDC88A chr2 55388886 - Exonic hg38 BRCA TCGA-AO-A0J4-01A 2 3 In-Frame Inter-chr q13.11 p16.1 84441 ChimerSeq TCGA FAWG TCGA_RNA-Seq TDRD3-DIAPH3 TDRD3 chr13 60444748 + DIAPH3 chr13 59810923 - Exonic hg38 BRCA TCGA-AO-A0J4-01A 1 1 In-Frame Intra-chr q21.2 q21.2 Seq+ 84442 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM49B-KAT6A FAM49B chr8 129871375 - KAT6A chr8 41934867 - Exonic hg38 BRCA TCGA-AO-A0J5-01A 12 36 Out-of-frame Intra-chr q24.21 p11.21 Oncogene Seq+ 84443 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP32-RAD51C USP32 chr17 60391882 - RAD51C chr17 58694931 + Exonic hg38 BRCA TCGA-AO-A0J5-01A 7 55 In-Frame Intra-chr q23.2 q22 Tumor suppressor gene Seq+ 84444 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYB561-USP32 CYB561 chr17 63446245 - USP32 chr17 60345608 - Exonic hg38 BRCA TCGA-AO-A0J5-01A 14 18 5'UTR-CDS Intra-chr q23.3 q23.2 Seq+ 84445 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF13B-SARAF KIF13B chr8 29146378 - SARAF chr8 30070059 - Exonic hg38 BRCA TCGA-AO-A0J5-01A 5 33 In-Frame Intra-chr p12 p12 84446 ChimerSeq TCGA FAWG TCGA_RNA-Seq VMP1-MARCH10 VMP1 chr17 59817773 + 2019_ 3_ 10_ chr17 62711344 - Exonic hg38 BRCA TCGA-AO-A0J5-01A 10 10 Out-of-frame Intra-chr q23.1 q23.2 Seq+ 84447 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDR2L-PECAM1 CDR2L chr17 75002228 + PECAM1 chr17 64390763 - Exonic hg38 BRCA TCGA-AO-A0J5-01A 2 37 CDS-5'UTR Intra-chr q25.1 q23.3 84448 ChimerSeq TCGA FAWG TCGA_RNA-Seq COA1-MRPS24 COA1 chr7 43729429 - MRPS24 chr7 43869074 - Exonic hg38 BRCA TCGA-AO-A0J5-01A 6 21 5'UTR-CDS Intra-chr p13 p13 Seq+ 84449 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARSG-ANKFN1 ARSG chr17 68351686 + ANKFN1 chr17 56492187 + Exonic hg38 BRCA TCGA-AO-A0J5-01A 6 17 Out-of-frame Intra-chr q24.2 q22 Seq+ 84450 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARSG-BPTF ARSG chr17 68291568 + BPTF chr17 67903789 + Exonic hg38 BRCA TCGA-AO-A0J5-01A 8 6 5'UTR-CDS Intra-chr q24.2 q24.2 Transcription factor Seq+ 84451 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP32-FCHSD2 ARHGAP32 chr11 129164319 - FCHSD2 chr11 73083740 - Exonic hg38 BRCA TCGA-AO-A0J5-01A 3 12 Out-of-frame Intra-chr q24.3 q13.4 Seq+ 84452 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMC5-PECAM1 PSMC5 chr17 63831965 + PECAM1 chr17 64390763 - Exonic hg38 BRCA TCGA-AO-A0J5-01A 5 4 Out-of-frame Intra-chr q23.3 q23.3 84453 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM9SF3-TLL2 TM9SF3 chr10 96561978 - TLL2 chr10 96446168 - Exonic hg38 BRCA TCGA-AO-A0J5-01A 2 1 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 84454 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOL11-HSF5 NOL11 chr17 67743586 + HSF5 chr17 58422430 - Exonic hg38 BRCA TCGA-AO-A0J5-01A 1 3 Out-of-frame Intra-chr q24.2 q22 Transcription factor Seq+ 84455 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACE-CCDC47 ACE chr17 63493580 + CCDC47 chr17 63773627 - Exonic hg38 BRCA TCGA-AO-A0J5-01A 1000 1000 Out-of-frame Intra-chr q23.3 q23.3 84456 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF3-ACP6 ARHGEF3 chr3 56882292 - ACP6 chr1 147659775 - Exonic hg38 BRCA TCGA-AO-A0J6-01A 6 38 In-Frame Inter-chr p14.3 q21.2 Seq+ 84457 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF7L2-TACC2 TCF7L2 chr10 113040126 + TACC2 chr10 122195040 + Exonic hg38 BRCA TCGA-AO-A0J6-01A 2 4 Out-of-frame Intra-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q26.13 Seq+ 84458 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-UBE2D1 CCDC6 chr10 59906122 - UBE2D1 chr10 58361338 + Exonic hg38 BRCA TCGA-AO-A0J6-01A 1 2 In-Frame Intra-chr q21.2 q21.1 Seq+ 84459 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERN1-EIF3C ERN1 chr17 64066671 - EIF3C chr16 28723164 + Exonic hg38 BRCA TCGA-AO-A0J7-01A 2 1 In-Frame Inter-chr q23.3 p11.2 84460 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2E1-INTS10 UBE2E1 chr3 23887699 + INTS10 chr8 19830406 + Exonic hg38 BRCA TCGA-AO-A0J7-01A 2 1 In-Frame Inter-chr p24.2 p21.3 Seq+ 84461 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRCH3-MED12L LRCH3 chr3 197817302 + MED12L chr3 151116338 + Exonic hg38 BRCA TCGA-AO-A0JA-01A 2 6 In-Frame Intra-chr q29 q25.1 Seq+ 84462 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM134-SPTBN2 TMEM134 chr11 67467312 - SPTBN2 chr11 66699082 - Exonic hg38 BRCA TCGA-AO-A0JD-01A 18 88 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 84463 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPP5-AS3 MPP5 chr14 67241533 + AS3 chr7 79458847 + Exonic hg38 BRCA TCGA-AO-A0JD-01A 8 37 Out-of-frame Inter-chr q23.3 Tumor suppressor gene 84464 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM123-CNTN5 TMEM123 chr11 102401539 - CNTN5 chr11 99556145 + Exonic hg38 BRCA TCGA-AO-A0JD-01A 11 15 CDS-5'UTR Intra-chr q22.2 q22.1 Seq+ 84465 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFAF2-ANKRD31 NDUFAF2 chr5 60945382 + ANKRD31 chr5 75169121 - Exonic hg38 BRCA TCGA-AO-A0JD-01A 3 17 In-Frame Intra-chr q12.1 q13.3 Seq+ 84466 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIP11-CYP46A1 TRIP11 chr14 91995352 - CYP46A1 chr14 99699466 + Exonic hg38 BRCA TCGA-AO-A0JD-01A 1 11 Out-of-frame Intra-chr q32.12 Oncogene q32.2 Seq+ 84467 ChimerSeq TCGA FAWG TCGA_RNA-Seq CORO1C-ANKS1B CORO1C chr12 108731429 - ANKS1B chr12 98751522 - Exonic hg38 BRCA TCGA-AO-A0JD-01A 1 9 5'UTR-CDS Intra-chr q24.11 q23.1 Seq+ 84468 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFHD1-EIF4E2 EFHD1 chr2 232672443 + EIF4E2 chr2 232564247 + Exonic hg38 BRCA TCGA-AO-A0JE-01A 168 488 In-Frame Intra-chr q37.1 q37.1 Seq+ 84469 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMC1A-GTPBP6 SMC1A chrX 53394778 - GTPBP6 chrY 305197 - Exonic hg38 BRCA TCGA-AO-A0JE-01A 7 32 Out-of-frame Inter-chr p11.22 p22.33 Seq+ 84470 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF331-NLRP11 ZNF331 chr19 53571730 + NLRP11 chr19 55801739 - Exonic hg38 BRCA TCGA-AO-A0JE-01A 1 21 Out-of-frame Intra-chr q13.42 Transcription factor q13.43 Seq+ 84471 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCPH1-CSMD1 MCPH1 chr8 6455252 + CSMD1 chr8 3493726 - Exonic hg38 BRCA TCGA-AO-A0JE-01A 2 8 3'UTR-CDS Intra-chr p23.1 Tumor suppressor gene p23.2 Tumor suppressor gene Seq+ 84472 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP6V1G1-TNC ATP6V1G1 chr9 114587920 + TNC chr9 115021267 - Exonic hg38 BRCA TCGA-AO-A0JE-01A 1 2 Out-of-frame Intra-chr q32 q33.1 84473 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXK2-SKAP1 FOXK2 chr17 82587272 + SKAP1 chr17 48396785 - Exonic hg38 BRCA TCGA-AO-A0JG-01A 31 105 In-Frame Intra-chr q25.3 Transcription factor q21.32 Seq+ 84474 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF184-CD2AP ZNF184 chr6 27467853 - CD2AP chr6 47533602 + Exonic hg38 BRCA TCGA-AO-A0JG-01A 10 25 In-Frame Intra-chr p22.1 Transcription factor p12.3 Seq+ 84475 ChimerSeq TCGA FAWG TCGA_RNA-Seq YPEL2-ATP5G1 YPEL2 chr17 59331824 + ATP5G1 chr17 48893409 + Exonic hg38 BRCA TCGA-AO-A0JG-01A 6 28 Out-of-frame Intra-chr q22 q21.32 Seq+ 84476 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKAP1-TMEM100 SKAP1 chr17 48345905 - TMEM100 chr17 55727982 - Exonic hg38 BRCA TCGA-AO-A0JG-01A 3 37 CDS-5'UTR Intra-chr q21.32 q22 Seq+ 84477 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAB2-AAMDC GAB2 chr11 78417646 - AAMDC chr11 77918061 + Exonic hg38 BRCA TCGA-AO-A0JG-01A 5 17 CDS-3'UTR Intra-chr q14.1 q14.1 84478 ChimerSeq TCGA FAWG TCGA_RNA-Seq YPEL2-UBE2Z YPEL2 chr17 59331824 + UBE2Z chr17 48916076 + Exonic hg38 BRCA TCGA-AO-A0JG-01A 2 10 5'UTR-CDS Intra-chr q22 q21.32 Seq+ 84479 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRIP1-WFDC21P BRIP1 chr17 61776401 - WFDC21P chr17 60083766 - Exonic hg38 BRCA TCGA-AO-A0JG-01A 1 10 CDS-3'UTR Intra-chr q23.2 Oncogene q23.1 84480 ChimerSeq TCGA FAWG TCGA_RNA-Seq GFOD1-CYP39A1 GFOD1 chr6 13486638 - CYP39A1 chr6 46639668 - Exonic hg38 BRCA TCGA-AO-A0JG-01A 1 4 In-Frame Intra-chr p23 p12.3 Seq+ 84481 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKL2-BCAR4 MKL2 chr16 14079354 + BCAR4 chr16 11820297 - Exonic hg38 BRCA TCGA-AO-A0JL-01A 80 304 Out-of-frame Intra-chr p13.12 p13.13 Seq+ 84482 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEKT5-RMI2 TEKT5 chr16 10681993 - RMI2 chr16 11350642 + Exonic hg38 BRCA TCGA-AO-A0JL-01A 8 11 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 84483 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKL2-CLEC16A MKL2 chr16 14079354 + CLEC16A chr16 11003074 + Exonic hg38 BRCA TCGA-AO-A0JL-01A 3 3 Out-of-frame Intra-chr p13.12 p13.13 Seq+ 84484 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLEC16A-LITAF CLEC16A chr16 11126146 + LITAF chr16 11556735 - Exonic hg38 BRCA TCGA-AO-A0JL-01A 2 5 CDS-5'UTR Intra-chr p13.13 p13.13 Tumor suppressor gene Seq+ 84485 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANXA13-DCAF13 ANXA13 chr8 123702642 - DCAF13 chr8 103440136 + Exonic hg38 BRCA TCGA-AO-A0JL-01A 1 2 Out-of-frame Intra-chr q24.13 q22.3 84486 ChimerSeq TCGA FAWG TCGA_RNA-Seq EMP2-NUBP1 EMP2 chr16 10580549 - NUBP1 chr16 10747143 + Exonic hg38 BRCA TCGA-AO-A0JL-01A 1 2 5'UTR-5'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 84487 ChimerSeq TCGA FAWG TCGA_RNA-Seq NME2-CEP112 NME2 chr17 51166497 + CEP112 chr17 65641065 - Exonic hg38 BRCA TCGA-AO-A0JM-01A 6 99 5'UTR-CDS Intra-chr q21.33 Transcription factor q24.1 Seq+ 84488 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCUN1D1-CCDC50 DCUN1D1 chr3 182961226 - CCDC50 chr3 191357088 + Exonic hg38 BRCA TCGA-AO-A0JM-01A 14 17 In-Frame Intra-chr q26.33 Oncogene q28 Seq+ 84489 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM25-TBX4 TRIM25 chr17 56892018 - TBX4 chr17 61482900 + Exonic hg38 BRCA TCGA-AO-A0JM-01A 4 18 Out-of-frame Intra-chr q22 q23.2 Transcription factor Seq+ 84490 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-ARL5C ERBB2 chr17 39712448 + ARL5C chr17 39165139 - Exonic hg38 BRCA TCGA-AO-A0JM-01A 7 4 Out-of-frame Intra-chr q12 Oncogene q12 Seq+ 84491 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED1-STAC2 MED1 chr17 39419717 - STAC2 chr17 39212396 - Exonic hg38 BRCA TCGA-AO-A0JM-01A 1 26 Out-of-frame Intra-chr q12 Tumor suppressor gene q12 84492 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAALADL2-PEX5L NAALADL2 chr3 175471758 + PEX5L chr3 179819976 - Exonic hg38 BRCA TCGA-AO-A0JM-01A 4 13 In-Frame Intra-chr q26.31 q26.33 Seq+ 84493 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR160-PRKCI GPR160 chr3 170039043 + PRKCI chr3 170259969 + Exonic hg38 BRCA TCGA-AO-A0JM-01A 1 23 5'UTR-CDS Intra-chr q26.2 q26.2 Seq+ 84494 ChimerSeq TCGA FAWG TCGA_RNA-Seq LLGL2-CA10 LLGL2 chr17 75571100 + CA10 chr17 51747818 - Exonic hg38 BRCA TCGA-AO-A0JM-01A 2 14 Out-of-frame Intra-chr q25.1 q22 Seq+ 84495 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK12-FBXL20 CDK12 chr17 39471763 + FBXL20 chr17 39282855 - Exonic hg38 BRCA TCGA-AO-A0JM-01A 1 15 In-Frame Intra-chr q12 Oncogene q12 Seq+ 84496 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM131A-NAA50 FAM131A chr3 184342860 + NAA50 chr3 113724092 - Exonic hg38 BRCA TCGA-AO-A0JM-01A 1 4 Out-of-frame Intra-chr q27.1 q13.31 Seq+ 84497 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMC5-IMMP2L SMC5 chr9 70267975 + IMMP2L chr7 110963565 - Exonic hg38 BRCA TCGA-AO-A124-01A 164 497 In-Frame Inter-chr q21.12 q31.1 Seq+ 84498 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM5A-NINJ2 KDM5A chr12 295573 - NINJ2 chr12 566178 - Exonic hg38 BRCA TCGA-AO-A124-01A 24 43 In-Frame Intra-chr p13.33 Tumor suppressor gene p13.33 Seq+ 84499 ChimerSeq TCGA FAWG TCGA_RNA-Seq FXN-SMC5 FXN chr9 69065035 + SMC5 chr9 70264304 + Exonic hg38 BRCA TCGA-AO-A124-01A 8 42 In-Frame Intra-chr q21.11 Tumor suppressor gene q21.12 Seq+ 84500 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAP30BP-KCTD2 SAP30BP chr17 75668625 + KCTD2 chr17 75035232 + Exonic hg38 BRCA TCGA-AO-A124-01A 8 22 5'UTR-5'UTR Intra-chr q25.1 q25.1 84501 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA4C-WNT5B SEMA4C chr2 96863682 - WNT5B chr12 1631298 + Exonic hg38 BRCA TCGA-AO-A124-01A 8 19 CDS-5'UTR Inter-chr q11.2 p13.33 Seq+ 84502 ChimerSeq TCGA FAWG TCGA_RNA-Seq TESK2-GPR37L1 TESK2 chr1 45457564 - GPR37L1 chr1 202127741 + Exonic hg38 BRCA TCGA-AO-A124-01A 5 22 In-Frame Intra-chr p34.1 TKL:LISK q32.1 Seq+ 84503 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFG3L1P-TUBB3 AFG3L1P chr16 89981923 + TUBB3 chr16 89932571 + Exonic hg38 BRCA TCGA-AO-A124-01A 3 26 5'UTR-5'UTR Intra-chr q24.3 q24.3 Seq+ 84504 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGF2BP3-ACSM1 IGF2BP3 chr7 23351305 - ACSM1 chr16 20671671 - Exonic hg38 BRCA TCGA-AO-A124-01A 2 23 In-Frame Inter-chr p15.3 p12.3 Seq+ 84505 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRB3-RTP1 CRB3 chr19 6466609 + RTP1 chr3 187197590 + Exonic hg38 BRCA TCGA-AO-A124-01A 3 13 In-Frame Inter-chr p13.3 q27.3 Seq+ 84506 ChimerSeq TCGA FAWG TCGA_RNA-Seq FIG4-WASF1 FIG4 chr6 109743772 + WASF1 chr6 110113460 - Exonic hg38 BRCA TCGA-AO-A124-01A 4 9 Out-of-frame Intra-chr q21 q21 Seq+ 84507 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2C-CALN1 KMT2C chr7 152162117 - CALN1 chr7 72106294 - Exonic hg38 BRCA TCGA-AO-A124-01A 1 19 Out-of-frame Intra-chr q36.1 Oncogene Tumor suppressor gene q11.22 84508 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK3-RREB1 STK3 chr8 98579664 - RREB1 chr6 7210804 + Exonic hg38 BRCA TCGA-AO-A124-01A 4 3 Out-of-frame Inter-chr q22.2 p24.3 Transcription factor Seq+ 84509 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOR2-RILPL2 NCOR2 chr12 124327568 - RILPL2 chr12 123418587 - Exonic hg38 BRCA TCGA-AO-A126-01A 18 28 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 84510 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD8-TOX4 CHD8 chr14 21430801 - TOX4 chr14 21489173 + Exonic hg38 BRCA TCGA-AO-A128-01A 24 90 In-Frame Intra-chr q11.2 q11.2 Seq+ 84511 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCMTD1-ST18 PCMTD1 chr8 51898930 - ST18 chr8 52166986 - Exonic hg38 BRCA TCGA-AO-A128-01A 2 13 Out-of-frame Intra-chr q11.23 q11.23 Transcription factor Seq+ 84512 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIFAP3-METTL11B KIFAP3 chr1 170074436 - METTL11B chr1 170157969 + Exonic hg38 BRCA TCGA-AO-A128-01A 1 15 5'UTR-CDS Intra-chr q24.2 q24.2 84513 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP37-RNF25 USP37 chr2 218529956 - RNF25 chr2 218668679 - Exonic hg38 BRCA TCGA-AO-A128-01A 2 8 In-Frame Intra-chr q35 q35 Seq+ 84514 ChimerSeq TCGA FAWG TCGA_RNA-Seq LUC7L3-ABCC3 LUC7L3 chr17 50744813 + ABCC3 chr17 50672971 + Exonic hg38 BRCA TCGA-AO-A128-01A 2 4 In-Frame Intra-chr q21.33 q21.33 Seq+ 84515 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFTN1-DAZL RFTN1 chr3 16493725 - DAZL chr3 16598598 - Exonic hg38 BRCA TCGA-AO-A128-01A 1 6 Out-of-frame Intra-chr p24.3 p24.3 Seq+ 84516 ChimerSeq TCGA FAWG TCGA_RNA-Seq QTRT1-ILF3 QTRT1 chr19 10713040 + ILF3 chr19 10688550 + Exonic hg38 BRCA TCGA-AO-A128-01A 1 4 Out-of-frame Intra-chr p13.2 p13.2 84517 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP5-PIGZ SENP5 chr3 196886694 + PIGZ chr3 196952031 - Exonic hg38 BRCA TCGA-AO-A129-01A 18 83 CDS-5'UTR Intra-chr q29 q29 Seq+ 84518 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK14-MICU2 MAPK14 chr6 36076599 + MICU2 chr13 21539688 - Exonic hg38 BRCA TCGA-AO-A129-01A 15 34 In-Frame Inter-chr p21.31 q12.11 84519 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRK2-BAIAP2 GRK2 chr11 67284373 + BAIAP2 chr17 81084832 + Exonic hg38 BRCA TCGA-AO-A129-01A 11 12 In-Frame Inter-chr q13.2 q25.3 84520 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM114A1-IQCE FAM114A1 chr4 38935790 + IQCE chr7 2589907 + Exonic hg38 BRCA TCGA-AO-A129-01A 7 20 In-Frame Inter-chr p14 p22.3 Seq+ 84521 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBA52-KXD1 UBA52 chr19 18573748 + KXD1 chr19 18562036 + Exonic hg38 BRCA TCGA-AO-A129-01A 4 26 CDS-5'UTR Intra-chr p13.11 p13.11 Seq+ 84522 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPP-RTP1 LPP chr3 188225527 + RTP1 chr3 187197590 + Exonic hg38 BRCA TCGA-AO-A129-01A 3 17 5'UTR-CDS Intra-chr q27.3 Oncogene q27.3 Seq+ 84523 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLOD2-ABCG1 PLOD2 chr3 146106532 - ABCG1 chr21 42225671 + Exonic hg38 BRCA TCGA-AO-A129-01A 5 5 In-Frame Inter-chr q24 q22.3 Seq+ 84524 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSF1-MROH1 HSF1 chr8 144291874 + MROH1 chr8 144250212 + Exonic hg38 BRCA TCGA-AO-A129-01A 2 14 3'UTR-CDS Intra-chr q24.3 Transcription factor q24.3 84525 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL5-ADGRG5 OSBPL5 chr11 3119547 - ADGRG5 chr16 57562056 + Exonic hg38 BRCA TCGA-AO-A129-01A 4 5 CDS-5'UTR Inter-chr p15.4 q21 84526 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2G2-RUNX1 UBE2G2 chr21 44801706 - RUNX1 chr21 34799462 - Exonic hg38 BRCA TCGA-AO-A129-01A 4 5 In-Frame Intra-chr q22.3 q22.12 Oncogene Tumor suppressor gene Transcription factor Seq+ 84527 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMC2-PGM5 SMC2 chr9 104129845 + PGM5 chr9 68499227 + Exonic hg38 BRCA TCGA-AO-A129-01A 2 10 In-Frame Intra-chr q31.1 q21.11 Seq+ 84528 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSKH1-NUTF2 PSKH1 chr16 67909706 + NUTF2 chr16 67865102 + Exonic hg38 BRCA TCGA-AO-A129-01A 2 7 CDS-5'UTR Intra-chr q22.1 CAMK:PSK q22.1 Seq+ 84529 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOMM40-NECTIN2 TOMM40 chr19 44891689 + NECTIN2 chr19 44871853 + Exonic hg38 BRCA TCGA-AO-A129-01A 1 10 In-Frame Intra-chr q13.32 q13.32 84530 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP7-RFC4 SENP7 chr3 101327666 - RFC4 chr3 186797614 - Exonic hg38 BRCA TCGA-AO-A129-01A 2 5 In-Frame Intra-chr q12.3 q27.3 Seq+ 84531 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAG1-CCDC77 STAG1 chr3 136752195 - CCDC77 chr12 405511 + Exonic hg38 BRCA TCGA-AO-A129-01A 2 5 5'UTR-5'UTR Inter-chr q22.3 p13.33 Seq+ 84532 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR2F-GGA1 POLR2F chr22 37967170 + GGA1 chr22 37616922 + Exonic hg38 BRCA TCGA-AO-A129-01A 1 5 In-Frame Intra-chr q13.1 q13.1 84533 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD4-CLEC9A CHD4 chr12 6577785 - CLEC9A chr12 10041466 + Exonic hg38 BRCA TCGA-AO-A12A-01A 5 38 CDS-5'UTR Intra-chr p13.31 p13.2 Seq+ 84534 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRHPR-GATA3 GRHPR chr9 37422833 + GATA3 chr10 8073739 + Exonic hg38 BRCA TCGA-AO-A12A-01A 1 1 Out-of-frame Inter-chr p13.2 p14 Oncogene Transcription factor 84535 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6R1-DPRX PPP6R1 chr19 55258435 - DPRX chr19 53632062 + Exonic hg38 BRCA TCGA-AO-A12C-01A 6 14 5'UTR-5'UTR Intra-chr q13.42 q13.42 Transcription factor Seq+ 84536 ChimerSeq TCGA FAWG TCGA_RNA-Seq VMP1-SMARCD2 VMP1 chr17 59731522 + SMARCD2 chr17 63832991 - Exonic hg38 BRCA TCGA-AO-A12C-01A 2 3 Out-of-frame Intra-chr q23.1 q23.3 Seq+ 84537 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCMTD2-SNX6 PCMTD2 chr20 64265429 + SNX6 chr14 34609742 - Exonic hg38 BRCA TCGA-AO-A12D-01A 10 47 3'UTR-3'UTR Inter-chr q13.1 Seq+ 84538 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUSD4-NVL SUSD4 chr1 223363278 - NVL chr1 224281185 - Exonic hg38 BRCA TCGA-AO-A12D-01A 4 18 Out-of-frame Intra-chr q41 q42.11 Seq+ 84539 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPN2-BROX CAPN2 chr1 223717831 + BROX chr1 222715684 + Exonic hg38 BRCA TCGA-AO-A12D-01A 3 4 CDS-5'UTR Intra-chr q41 q41 84540 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOA1-PPP3CA NOA1 chr4 56966620 - PPP3CA chr4 101196116 - Exonic hg38 BRCA TCGA-AO-A12D-01A 3 2 Out-of-frame Intra-chr q12 q24 84541 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANK3-TMPRSS15 ANK3 chr10 60134271 - TMPRSS15 chr21 18315256 - Exonic hg38 BRCA TCGA-AO-A12D-01A 1 3 Out-of-frame Inter-chr q21.2 q21.1 Seq+ 84542 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH1-VPS50 CDH1 chr16 68823626 + VPS50 chr7 93323611 + Exonic hg38 BRCA TCGA-AO-A12E-01A 131 336 In-Frame Inter-chr q22.1 Oncogene Tumor suppressor gene q21.2 Seq+ 84543 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS50-CDH1 VPS50 chr7 93311272 + CDH1 chr16 68828174 + Exonic hg38 BRCA TCGA-AO-A12E-01A 10 40 In-Frame Inter-chr q21.2 q22.1 Oncogene Tumor suppressor gene 84544 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT11-PRKAG2 GALNT11 chr7 152113398 + PRKAG2 chr7 151565885 - Exonic hg38 BRCA TCGA-AO-A12E-01A 8 23 In-Frame Intra-chr q36.1 q36.1 Seq+ 84545 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKAG2-KMT2C PRKAG2 chr7 151632069 - KMT2C chr7 152136924 - Exonic hg38 BRCA TCGA-AO-A12E-01A 2 2 Out-of-frame Intra-chr q36.1 q36.1 Oncogene Tumor suppressor gene 84546 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX23-SMAGP DDX23 chr12 48843940 - SMAGP chr12 51269316 - Exonic hg38 BRCA TCGA-AO-A12E-01A 1 2 CDS-5'UTR Intra-chr q13.12 q13.13 84547 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS9-AZIN1 INTS9 chr8 28796544 - AZIN1 chr8 102887147 - Exonic hg38 BRCA TCGA-AO-A12E-01A 1 1 CDS-5'UTR Intra-chr p21.1 q22.3 84548 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPRD1A-RALGAPA2 RPRD1A chr18 36030808 - RALGAPA2 chr20 20680801 - Exonic hg38 BRCA TCGA-AO-A12F-01A 8 23 Out-of-frame Inter-chr q12.2 p11.23 Seq+ 84549 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALT7-NSD1 B4GALT7 chr5 177608622 + NSD1 chr5 177191884 + Exonic hg38 BRCA TCGA-AO-A12F-01A 4 10 In-Frame Intra-chr q35.3 q35.3 Oncogene Seq+ 84550 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF79-FAM129B ZNF79 chr9 127436003 + FAM129B chr9 127507431 - Exonic hg38 BRCA TCGA-AO-A12G-01A 65 235 Out-of-frame Intra-chr q33.3 Transcription factor q34.11 Seq+ 84551 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID5B-ABLIM1 ARID5B chr10 61940408 + ABLIM1 chr10 114441786 - Exonic hg38 BRCA TCGA-AO-A12G-01A 19 43 In-Frame Intra-chr q21.2 Transcription factor q25.3 Seq+ 84552 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGPS1-ZNF79 RALGPS1 chr9 126977745 + ZNF79 chr9 127428832 + Exonic hg38 BRCA TCGA-AO-A12G-01A 1 3 Out-of-frame Intra-chr q33.3 q33.3 Transcription factor Seq+ 84553 ChimerSeq TCGA FAWG TCGA_RNA-Seq LALBA-CSN2 LALBA chr12 48569122 - CSN2 chr4 69957492 - Exonic hg38 BRCA TCGA-AO-A1KO-01A 7 663 Out-of-frame Inter-chr q13.11 Tumor suppressor gene Seq+ 84554 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSN2-LALBA CSN2 chr4 69957493 - LALBA chr12 48569121 - Exonic hg38 BRCA TCGA-AO-A1KO-01A 3 522 Out-of-frame Inter-chr Tumor suppressor gene q13.11 Seq+ 84555 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSN1S1-CSN2 CSN1S1 chr4 69932606 + CSN2 chr4 69957804 - Exonic hg38 BRCA TCGA-AO-A1KO-01A 1 192 In-Frame Intra-chr q13.3 Tumor suppressor gene 84556 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSN2-CSN1S1 CSN2 chr4 69957274 - CSN1S1 chr4 69935926 + Exonic hg38 BRCA TCGA-AO-A1KO-01A 1 167 In-Frame Intra-chr Tumor suppressor gene q13.3 84557 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAFAH1B2-CSN2 PAFAH1B2 chr11 117137370 + CSN2 chr4 69955449 - Exonic hg38 BRCA TCGA-AO-A1KO-01A 1000 1000 Out-of-frame Inter-chr q23.3 Tumor suppressor gene 84558 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB3-CSN2 ERBB3 chr12 56102327 + CSN2 chr4 69961007 - Exonic hg38 BRCA TCGA-AO-A1KO-01A 1000 1000 Out-of-frame Inter-chr q13.2 Oncogene Tumor suppressor gene 84559 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1324-CSN2 KIAA1324 chr1 109205443 + CSN2 chr4 69957768 - Exonic hg38 BRCA TCGA-AO-A1KO-01A 1000 1000 Out-of-frame Inter-chr p13.3 Tumor suppressor gene 84560 ChimerSeq TCGA FAWG TCGA_RNA-Seq NACA-CSN2 NACA chr12 56712886 - CSN2 chr4 69957351 - Exonic hg38 BRCA TCGA-AO-A1KO-01A 1000 1000 Out-of-frame Inter-chr q13.3 Tumor suppressor gene 84561 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP1A1-CSN2 ATP1A1 chr1 116388712 + CSN2 chr4 69957648 - Exonic hg38 BRCA TCGA-AO-A1KO-01A 1000 1000 Out-of-frame Inter-chr p13.1 Tumor suppressor gene 84562 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNC1H1-CSN2 DYNC1H1 chr14 102050792 + CSN2 chr4 69961007 - Exonic hg38 BRCA TCGA-AO-A1KO-01A 1000 1000 Out-of-frame Inter-chr q32.31 Tumor suppressor gene 84563 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPA1-CSN2 HNRNPA1 chr12 54285104 + CSN2 chr4 69957615 - Exonic hg38 BRCA TCGA-AO-A1KO-01A 1000 1000 Out-of-frame Inter-chr q13.13 Tumor suppressor gene 84564 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHF-CSN2 EHF chr11 34651795 + CSN2 chr4 69957780 - Exonic hg38 BRCA TCGA-AO-A1KO-01A 1000 1000 Out-of-frame Inter-chr p13 Tumor suppressor gene Transcription factor Tumor suppressor gene 84565 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATL2-CSN2 ATL2 chr2 38294880 - CSN2 chr4 69957634 - Exonic hg38 BRCA TCGA-AO-A1KO-01A 1000 1000 Out-of-frame Inter-chr p22.1 Tumor suppressor gene 84566 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCSER2-CSN2 CCSER2 chr10 84514587 + CSN2 chr4 69961007 - Exonic hg38 BRCA TCGA-AO-A1KO-01A 1000 1000 Out-of-frame Inter-chr q23.1 Tumor suppressor gene 84567 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP93-GPT2 NUP93 chr16 56839604 + GPT2 chr16 46928907 + Exonic hg38 BRCA TCGA-AO-A1KP-01A 2 2 Out-of-frame Intra-chr q13 q11.2 84568 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESR1-POLR2E ESR1 chr6 152100316 + POLR2E chr19 1086593 - Exonic hg38 BRCA TCGA-AO-A1KQ-01A 10 5 Out-of-frame Inter-chr q25.1 Oncogene Tumor suppressor gene Transcription factor p13.3 84569 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRCA2-ATP8A2 BRCA2 chr13 32379515 + ATP8A2 chr13 25927111 + Exonic hg38 BRCA TCGA-AO-A1KQ-01A 4 12 Out-of-frame Intra-chr q13.1 Oncogene Tumor suppressor gene q12.13 Seq+ 84570 ChimerSeq TCGA FAWG TCGA_RNA-Seq TDG-STAB2 TDG chr12 103966060 + STAB2 chr12 103761300 + Exonic hg38 BRCA TCGA-AO-A1KQ-01A 1 9 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 84571 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB7B-CKS1B ZBTB7B chr1 155002943 + CKS1B chr1 154977987 + Exonic hg38 BRCA TCGA-AO-A1KR-01A 31 37 5'UTR-5'UTR Intra-chr q21.3 Transcription factor q21.3 Oncogene Seq+ 84572 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPOP-TAC4 SPOP chr17 49677933 - TAC4 chr17 49844157 - Exonic hg38 BRCA TCGA-AO-A1KR-01A 11 33 5'UTR-CDS Intra-chr q21.33 Oncogene Tumor suppressor gene q21.33 Seq+ 84573 ChimerSeq TCGA FAWG TCGA_RNA-Seq NXF1-TAF6L NXF1 chr11 62797588 - TAF6L chr11 62786749 + Exonic hg38 BRCA TCGA-AO-A1KR-01A 9 24 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 84574 ChimerSeq TCGA FAWG TCGA_RNA-Seq CS-PRIM1 CS chr12 56273587 - PRIM1 chr12 56731734 - Exonic hg38 BRCA TCGA-AO-A1KR-01A 3 37 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 84575 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC3A2-NXF1 SLC3A2 chr11 62856381 + NXF1 chr11 62795007 - Exonic hg38 BRCA TCGA-AO-A1KR-01A 4 26 In-Frame Intra-chr q12.3 q12.3 Seq+ 84576 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC24D-PLRG1 SEC24D chr4 118751996 - PLRG1 chr4 154536744 - Exonic hg38 BRCA TCGA-AO-A1KR-01A 1 28 In-Frame Intra-chr q26 q31.3 Seq+ 84577 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRAS-NME9 MRAS chr3 138373076 + NME9 chr3 138306480 - Exonic hg38 BRCA TCGA-AO-A1KR-01A 2 18 In-Frame Intra-chr q22.3 q22.3 Seq+ 84578 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST3GAL1-COL22A1 ST3GAL1 chr8 133475719 - COL22A1 chr8 138703347 - Exonic hg38 BRCA TCGA-AO-A1KR-01A 2 14 In-Frame Intra-chr q24.22 q24.3 Seq+ 84579 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNTB1-COL22A1 SNTB1 chr8 120693692 - COL22A1 chr8 138703347 - Exonic hg38 BRCA TCGA-AO-A1KR-01A 1 12 Out-of-frame Intra-chr q24.12 q24.3 Seq+ 84580 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPAMD8-HAUS8 CPAMD8 chr19 16975097 - HAUS8 chr19 17050176 - Exonic hg38 BRCA TCGA-AO-A1KR-01A 2 7 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 84581 ChimerSeq TCGA FAWG TCGA_RNA-Seq FEM1A-SELENOM FEM1A chr19 4795137 + SELENOM chr22 31105965 - Exonic hg38 BRCA TCGA-AO-A1KR-01A 3 3 3'UTR-CDS Inter-chr p13.3 q12.2 84582 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNIP2-LARP7 FNIP2 chr4 158835476 + LARP7 chr4 112650461 + Exonic hg38 BRCA TCGA-AO-A1KR-01A 3 2 In-Frame Intra-chr q32.1 q25 Seq+ 84583 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC37B-RAD51C LRRC37B chr17 32018054 + RAD51C chr17 58734118 + Exonic hg38 BRCA TCGA-AO-A1KR-01A 2 2 5'UTR-5'UTR Intra-chr q11.2 q22 Tumor suppressor gene Seq+ 84584 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTDH-SNX31 MTDH chr8 97644887 + SNX31 chr8 100636011 - Exonic hg38 BRCA TCGA-AO-A1KR-01A 1 5 In-Frame Intra-chr q22.1 q22.3 Seq+ 84585 ChimerSeq TCGA FAWG TCGA_RNA-Seq PREX1-EHBP1 PREX1 chr20 48827642 - EHBP1 chr2 62706897 + Exonic hg38 BRCA TCGA-AO-A1KS-01A 5 18 CDS-5'UTR Inter-chr q13.13 p15 Seq+ 84586 ChimerSeq TCGA FAWG TCGA_RNA-Seq B3GLCT-USPL1 B3GLCT chr13 31323895 + USPL1 chr13 30642628 + Exonic hg38 BRCA TCGA-AO-A1KS-01A 2 7 Out-of-frame Intra-chr q12.3 q12.3 84587 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL34-DHRS12 RPL34 chr4 108622204 + DHRS12 chr13 51768296 - Exonic hg38 BRCA TCGA-AO-A1KS-01A 1 1 Out-of-frame Inter-chr q25 q14.3 84588 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRK2-TPCN2 GRK2 chr11 67277348 + TPCN2 chr11 69135435 + Exonic hg38 BRCA TCGA-AO-A1KT-01A 127 862 CDS-3'UTR Intra-chr q13.2 q13.3 84589 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB11FIP1-ZDHHC24 RAB11FIP1 chr8 37899071 - ZDHHC24 chr11 66527006 - Exonic hg38 BRCA TCGA-AO-A1KT-01A 26 119 Out-of-frame Inter-chr p11.23 q13.2 Seq+ 84590 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD3-GAB2 NSD3 chr8 38381799 - GAB2 chr11 78280901 - Exonic hg38 BRCA TCGA-AO-A1KT-01A 22 67 5'UTR-5'UTR Inter-chr p11.23 Tumor suppressor gene q14.1 84591 ChimerSeq TCGA FAWG TCGA_RNA-Seq WBP1L-ADAMTS2 WBP1L chr10 102744143 + ADAMTS2 chr5 179273064 - Exonic hg38 BRCA TCGA-AO-A1KT-01A 1 8 In-Frame Inter-chr q24.32 84592 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIA-ST6GALNAC3 NFIA chr1 61406727 + ST6GALNAC3 chr1 76576846 + Exonic hg38 BRCA TCGA-AO-A1KT-01A 2 2 Out-of-frame Intra-chr p31.3 Transcription factor p31.1 Seq+ 84593 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-CBLB PPFIA1 chr11 70362488 + CBLB chr3 105740631 - Exonic hg38 BRCA TCGA-AQ-A04H-01B 35 110 Out-of-frame Inter-chr q13.3 q13.11 Seq+ 84594 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KB1-RNF213 RPS6KB1 chr17 59893924 + RNF213 chr17 80371874 + Exonic hg38 BRCA TCGA-AQ-A04H-01B 18 68 5'UTR-CDS Intra-chr q23.1 Oncogene q25.3 Oncogene Seq+ 84595 ChimerSeq TCGA FAWG TCGA_RNA-Seq AATF-TADA2A AATF chr17 36953907 + TADA2A chr17 37474556 + Exonic hg38 BRCA TCGA-AQ-A04H-01B 1 18 3'UTR-3'UTR Intra-chr q12 84596 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTRH2-PEX5L PTRH2 chr17 59707371 - PEX5L chr3 179859157 - Exonic hg38 BRCA TCGA-AQ-A04H-01B 4 6 5'UTR-CDS Inter-chr q23.1 q26.33 Seq+ 84597 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAC3-ABCA8 RAC3 chr17 82031796 + ABCA8 chr17 68869779 - Exonic hg38 BRCA TCGA-AQ-A04H-01B 2 11 In-Frame Intra-chr q25.3 q24.2 Seq+ 84598 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF213-DGKG RNF213 chr17 80373165 + DGKG chr3 186105942 - Exonic hg38 BRCA TCGA-AQ-A04H-01B 1 14 CDS-3'UTR Inter-chr q25.3 Oncogene q27.3 84599 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF213-ETV5 RNF213 chr17 80373165 + ETV5 chr3 186105942 - Exonic hg38 BRCA TCGA-AQ-A04H-01B 1 14 CDS-5'UTR Inter-chr q25.3 Oncogene q27.2 Oncogene Transcription factor Seq+ 84600 ChimerSeq TCGA FAWG TCGA_RNA-Seq THOC2-RHOXF2B THOC2 chrX 123732952 - RHOXF2B chrX 120077288 - Exonic hg38 BRCA TCGA-AQ-A04H-01B 1 9 CDS-5'UTR Intra-chr q25 q24 Transcription factor 84601 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBX8-ACTL6A CBX8 chr17 79801401 - ACTL6A chr3 179580894 + Exonic hg38 BRCA TCGA-AQ-A04H-01B 1 5 5'UTR-CDS Inter-chr q25.3 q26.33 84602 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM1-RPH3AL PUM1 chr1 31059204 - RPH3AL chr17 319549 - Exonic hg38 BRCA TCGA-AQ-A04J-01A 6 33 CDS-5'UTR Inter-chr p35.2 Seq+ 84603 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP153-RNF2 NUP153 chr6 17706277 - RNF2 chr1 185087552 + Exonic hg38 BRCA TCGA-AQ-A04J-01A 7 23 CDS-5'UTR Inter-chr p22.3 q25.3 Oncogene Seq+ 84604 ChimerSeq TCGA FAWG TCGA_RNA-Seq APOLD1-CDKN1B APOLD1 chr12 12726096 + CDKN1B chr12 12721036 + Exonic hg38 BRCA TCGA-AQ-A04J-01A 8 18 CDS-3'UTR Intra-chr p13.1 p13.1 Tumor suppressor gene Seq+ 84605 ChimerSeq TCGA FAWG TCGA_RNA-Seq LSM10-CLSTN1 LSM10 chr1 36393766 - CLSTN1 chr1 9730705 - Exonic hg38 BRCA TCGA-AQ-A04J-01A 1 12 Out-of-frame Intra-chr p34.3 p36.22 Seq+ 84606 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKRN2-CCDC191 MKRN2 chr3 12557176 + CCDC191 chr3 114001696 - Exonic hg38 BRCA TCGA-AQ-A04J-01A 1 7 Out-of-frame Intra-chr p25.2 q13.31 84607 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT6B-CCDC172 KAT6B chr10 74981928 + CCDC172 chr10 116340734 + Exonic hg38 BRCA TCGA-AQ-A04L-01B 113 522 3'UTR-CDS Intra-chr Oncogene q25.3 Seq+ 84608 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAPGEF5-PLPP4 RAPGEF5 chr7 22230846 - PLPP4 chr10 120575131 + Exonic hg38 BRCA TCGA-AQ-A04L-01B 34 139 In-Frame Inter-chr p15.3 q26.12 84609 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF18-AAMDC ARHGEF18 chr19 7453715 + AAMDC chr11 77918061 + Exonic hg38 BRCA TCGA-AQ-A04L-01B 17 55 CDS-3'UTR Inter-chr p13.2 q14.1 84610 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK11-TYK2 STK11 chr19 1207203 + TYK2 chr19 10362657 - Exonic hg38 BRCA TCGA-AQ-A04L-01B 13 47 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.2 TK:JakA Seq+ 84611 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESYT2-CPED1 ESYT2 chr7 158759486 - CPED1 chr7 121064238 + Exonic hg38 BRCA TCGA-AQ-A04L-01B 18 25 In-Frame Intra-chr q36.3 q31.31 Seq+ 84612 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOB1B-PLPP4 MOB1B chr4 70902550 + PLPP4 chr10 120503818 + Exonic hg38 BRCA TCGA-AQ-A04L-01B 13 31 In-Frame Inter-chr q13.3 Tumor suppressor gene q26.12 84613 ChimerSeq TCGA FAWG TCGA_RNA-Seq UTRN-LYRM4 UTRN chr6 144474759 + LYRM4 chr6 5109491 - Exonic hg38 BRCA TCGA-AQ-A04L-01B 9 46 In-Frame Intra-chr q24.2 p25.1 Seq+ 84614 ChimerSeq TCGA FAWG TCGA_RNA-Seq GFRA1-DGKB GFRA1 chr10 116269503 - DGKB chr7 14694194 - Exonic hg38 BRCA TCGA-AQ-A04L-01B 9 36 Out-of-frame Inter-chr q25.3 p21.2 Seq+ 84615 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF3H-EFR3A EIF3H chr8 116655856 - EFR3A chr8 132012965 + Exonic hg38 BRCA TCGA-AQ-A04L-01B 11 18 CDS-5'UTR Intra-chr q24.11 q24.22 Seq+ 84616 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH1-NPFFR2 CDH1 chr16 68738411 + NPFFR2 chr4 72138040 + Exonic hg38 BRCA TCGA-AQ-A04L-01B 7 25 In-Frame Inter-chr q22.1 Oncogene Tumor suppressor gene q13.3 Seq+ 84617 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPP-SPATA16 LPP chr3 188866378 + SPATA16 chr3 173019575 - Exonic hg38 BRCA TCGA-AQ-A04L-01B 10 11 In-Frame Intra-chr q27.3 Oncogene q26.31 Seq+ 84618 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANK3-CHN2 ANK3 chr10 60261859 - CHN2 chr7 29393679 + Exonic hg38 BRCA TCGA-AQ-A04L-01B 5 29 In-Frame Inter-chr q21.2 p14.3 Seq+ 84619 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR2-AP1M1 FGFR2 chr10 121496532 - AP1M1 chr19 16203459 + Exonic hg38 BRCA TCGA-AQ-A04L-01B 5 9 In-Frame Inter-chr q26.13 TK:FGFR Oncogene p13.11 Seq+ 84620 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESR1-UTRN ESR1 chr6 151808364 + UTRN chr6 144444281 + Exonic hg38 BRCA TCGA-AQ-A04L-01B 4 12 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q24.2 Seq+ 84621 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIC-RPS3 NFIC chr19 3463202 + RPS3 chr11 75421727 + Exonic hg38 BRCA TCGA-AQ-A04L-01B 3 15 3'UTR-3'UTR Inter-chr p13.3 Transcription factor q13.4 Seq+ 84622 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK1-WDR11 CDK1 chr10 60778570 + WDR11 chr10 120900029 + Exonic hg38 BRCA TCGA-AQ-A04L-01B 4 10 5'UTR-CDS Intra-chr q21.2 q26.12 Tumor suppressor gene Seq+ 84623 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM213A-YTHDC1 FAM213A chr10 80420645 + YTHDC1 chr4 68314323 - Exonic hg38 BRCA TCGA-AQ-A04L-01B 3 12 Out-of-frame Inter-chr q23.1 Seq+ 84624 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL3-CORIN OSBPL3 chr7 24892377 - CORIN chr4 47744583 - Exonic hg38 BRCA TCGA-AQ-A04L-01B 4 8 Out-of-frame Inter-chr p15.3 p12 Seq+ 84625 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNS3-ZNRF2 TNS3 chr7 47435282 - ZNRF2 chr7 30362377 + Exonic hg38 BRCA TCGA-AQ-A04L-01B 2 11 Out-of-frame Intra-chr p12.3 p14.3 Seq+ 84626 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM213A-JCHAIN FAM213A chr10 80420645 + JCHAIN chr4 70662215 - Exonic hg38 BRCA TCGA-AQ-A04L-01B 3 5 Out-of-frame Inter-chr q23.1 q13.3 84627 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANK3-SP2 ANK3 chr10 60615186 - SP2 chr17 47915312 + Exonic hg38 BRCA TCGA-AQ-A04L-01B 2 7 Out-of-frame Inter-chr q21.2 q21.32 Transcription factor Seq+ 84628 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK1-ARHGEF18 PAK1 chr11 77332730 - ARHGEF18 chr19 7456327 + Exonic hg38 BRCA TCGA-AQ-A04L-01B 2 7 Out-of-frame Inter-chr q14.1 STE:STE20 p13.2 Seq+ 84629 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDCA7L-MPP6 CDCA7L chr7 21945781 - MPP6 chr7 24641716 + Exonic hg38 BRCA TCGA-AQ-A04L-01B 1 8 In-Frame Intra-chr p15.3 p15.3 84630 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROR2-KCNC2 ROR2 chr9 91948607 - KCNC2 chr12 75051317 - Exonic hg38 BRCA TCGA-AQ-A04L-01B 2 4 Out-of-frame Inter-chr q22.31 TK:Ror Tumor suppressor gene q21.1 Seq+ 84631 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANBP3-PIP5K1C RANBP3 chr19 5978061 - PIP5K1C chr19 3667353 - Exonic hg38 BRCA TCGA-AQ-A04L-01B 1 4 In-Frame Intra-chr p13.3 p13.3 Seq+ 84632 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGPEP1-KDM4C PGPEP1 chr19 18357615 + KDM4C chr9 7011698 + Exonic hg38 BRCA TCGA-AQ-A04L-01B 1 3 Out-of-frame Inter-chr p13.11 p24.1 Seq+ 84633 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF217-BCAS3 ZNF217 chr20 53597631 - BCAS3 chr17 61368327 + Exonic hg38 BRCA TCGA-AQ-A0Y5-01A 66 418 5'UTR-CDS Inter-chr q13.2 Oncogene Transcription factor q23.2 Seq+ 84634 ChimerSeq TCGA FAWG TCGA_RNA-Seq LSM14A-ACTN4 LSM14A chr19 34172763 + ACTN4 chr19 38700600 + Exonic hg38 BRCA TCGA-AQ-A0Y5-01A 83 317 3'UTR-3'UTR Intra-chr Seq+ 84635 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRD4-CC2D1A BRD4 chr19 15332290 - CC2D1A chr19 13912323 + Exonic hg38 BRCA TCGA-AQ-A0Y5-01A 29 3 5'UTR-CDS Intra-chr p13.12 Atypical:BRD p13.12 Transcription factor 84636 ChimerSeq TCGA FAWG TCGA_RNA-Seq NBPF26-TMEM150C NBPF26 chr1 120724250 + TMEM150C chr4 82504667 - Exonic hg38 BRCA TCGA-AQ-A0Y5-01A 6 47 5'UTR-5'UTR Inter-chr p11.2 q21.22 84637 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2K2-CAMKK1 MAP2K2 chr19 4110509 - CAMKK1 chr17 3885730 - Exonic hg38 BRCA TCGA-AQ-A0Y5-01A 4 14 Out-of-frame Inter-chr p13.3 STE:STE7 Oncogene p13.2 Seq+ 84638 ChimerSeq TCGA FAWG TCGA_RNA-Seq MMD-LRRC37A11P MMD chr17 55407746 - LRRC37A11P chr17 39044388 + Exonic hg38 BRCA TCGA-AQ-A0Y5-01A 2 15 CDS-5'UTR Intra-chr q22 q12 Seq+ 84639 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRK-DTNBP1 FRK chr6 116059968 - DTNBP1 chr6 15533395 - Exonic hg38 BRCA TCGA-AQ-A1H2-01A 6 6 Out-of-frame Intra-chr q22.1 TK:Src Tumor suppressor gene p22.3 Seq+ 84640 ChimerSeq TCGA FAWG TCGA_RNA-Seq WFDC2-PI3 WFDC2 chr20 45470532 + PI3 chr20 45175861 + Exonic hg38 BRCA TCGA-AQ-A54N-01A 44 200 In-Frame Intra-chr q13.12 q13.12 Seq+ 84641 ChimerSeq TCGA FAWG TCGA_RNA-Seq EVI5L-VAV1 EVI5L chr19 7858331 + VAV1 chr19 6843135 + Exonic hg38 BRCA TCGA-AQ-A54N-01A 11 43 In-Frame Intra-chr p13.2 p13.3 Seq+ 84642 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAAH2-NBDY FAAH2 chrX 57381029 + NBDY chrX 56817320 + Exonic hg38 BRCA TCGA-AQ-A54N-01A 9 29 CDS-3'UTR Intra-chr p11.21 p11.21 84643 ChimerSeq TCGA FAWG TCGA_RNA-Seq HERC1-PCLAF HERC1 chr15 63752958 - PCLAF chr15 64366075 - Exonic hg38 BRCA TCGA-AQ-A54N-01A 9 21 Out-of-frame Intra-chr q22.31 q22.31 84644 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEBL-SKIDA1 NEBL chr10 21172383 - SKIDA1 chr10 21523871 - Exonic hg38 BRCA TCGA-AQ-A54N-01A 3 18 CDS-5'UTR Intra-chr p12.31 p12.31 Seq+ 84645 ChimerSeq TCGA FAWG TCGA_RNA-Seq GID4-RAI1 GID4 chr17 18045206 + RAI1 chr17 17810734 + Exonic hg38 BRCA TCGA-AQ-A54N-01A 4 12 CDS-3'UTR Intra-chr p11.2 p11.2 Seq+ 84646 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP3-GIMAP2 AGAP3 chr7 151087072 + GIMAP2 chr7 150687052 + Exonic hg38 BRCA TCGA-AQ-A54N-01A 3 5 5'UTR-5'UTR Intra-chr q36.1 q36.1 Seq+ 84647 ChimerSeq TCGA FAWG TCGA_RNA-Seq STUB1-RAB40C STUB1 chr16 680684 + RAB40C chr16 625432 + Exonic hg38 BRCA TCGA-AQ-A54N-01A 3 2 In-Frame Intra-chr p13.3 Tumor suppressor gene p13.3 Seq+ 84648 ChimerSeq TCGA FAWG TCGA_RNA-Seq HCFC1-IRAK1 HCFC1 chrX 153950813 - IRAK1 chrX 154018120 - Exonic hg38 BRCA TCGA-AQ-A54N-01A 1 5 Out-of-frame Intra-chr q28 q28 TKL:IRAK 84649 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMNA-SYT11 LMNA chr1 156115274 + SYT11 chr1 155880500 + Exonic hg38 BRCA TCGA-AQ-A54N-01A 1 4 Out-of-frame Intra-chr q22 q22 Seq+ 84650 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCP2-REEP5 DCP2 chr5 112976986 + REEP5 chr5 112902518 - Exonic hg38 BRCA TCGA-AQ-A54O-01A 3 17 In-Frame Intra-chr q22.2 q22.2 Seq+ 84651 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD6-WFDC11 CHD6 chr20 41618340 - WFDC11 chr20 45650651 - Exonic hg38 BRCA TCGA-AQ-A54O-01A 2 6 5'UTR-5'UTR Intra-chr q12 q13.12 Seq+ 84652 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERGIC1-JAKMIP2 ERGIC1 chr5 172834433 + JAKMIP2 chr5 147612371 - Exonic hg38 BRCA TCGA-AQ-A7U7-01A 4 38 Out-of-frame Intra-chr q35.1 q32 Seq+ 84653 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3CB-RASA2 PIK3CB chr3 138665036 - RASA2 chr3 141516328 + Exonic hg38 BRCA TCGA-AQ-A7U7-01A 1 6 In-Frame Intra-chr q22.3 Oncogene q23 Seq+ 84654 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGF12-SYN3 FGF12 chr3 192335361 - SYN3 chr22 32596736 - Exonic hg38 BRCA TCGA-AR-A0TP-01A 7 13 In-Frame Inter-chr q29 q12.3 Seq+ 84655 ChimerSeq TCGA FAWG TCGA_RNA-Seq AIM1-ARMC2 AIM1 chr6 106544697 + ARMC2 chr6 108973357 + Exonic hg38 BRCA TCGA-AR-A0TP-01A 4 19 Out-of-frame Intra-chr q21 Seq+ 84656 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDPK1-CCNF PDPK1 chr16 2538771 + CCNF chr16 2445458 + Exonic hg38 BRCA TCGA-AR-A0TP-01A 1 18 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 84657 ChimerSeq TCGA FAWG TCGA_RNA-Seq BOC-SLC35A5 BOC chr3 113250833 + SLC35A5 chr3 112569171 + Exonic hg38 BRCA TCGA-AR-A0TP-01A 1 14 In-Frame Intra-chr q13.2 q13.2 84658 ChimerSeq TCGA FAWG TCGA_RNA-Seq JAK1-ZC3H7B JAK1 chr1 64846649 - ZC3H7B chr22 41343415 + Exonic hg38 BRCA TCGA-AR-A0TP-01A 2 9 In-Frame Inter-chr p31.3 TK:JakA Oncogene q13.2 Seq+ 84659 ChimerSeq TCGA FAWG TCGA_RNA-Seq TADA2A-MED24 TADA2A chr17 37458587 + MED24 chr17 40036154 - Exonic hg38 BRCA TCGA-AR-A0TQ-01A 39 149 3'UTR-3'UTR Intra-chr q12 q21.1 Seq+ 84660 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAG9-TADA2A SPAG9 chr17 51056412 - TADA2A chr17 37411269 + Exonic hg38 BRCA TCGA-AR-A0TQ-01A 12 46 CDS-3'UTR Intra-chr q21.33 q12 Seq+ 84661 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNFRSF6B-IKZF3 TNFRSF6B chr20 63697170 + IKZF3 chr17 39760053 - Exonic hg38 BRCA TCGA-AR-A0TQ-01A 12 28 Out-of-frame Inter-chr q13.33 q21.1 Tumor suppressor gene Transcription factor Seq+ 84662 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRIP1-SPAG9 BRIP1 chr17 61857058 - SPAG9 chr17 51079704 - Exonic hg38 BRCA TCGA-AR-A0TQ-01A 9 26 Out-of-frame Intra-chr q23.2 Oncogene q21.33 Seq+ 84663 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-CYTH1 BCAS3 chr17 60924500 + CYTH1 chr17 78709732 - Exonic hg38 BRCA TCGA-AR-A0TQ-01A 7 11 In-Frame Intra-chr q23.2 q25.3 Seq+ 84664 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAG9-BRIP1 SPAG9 chr17 51056412 - BRIP1 chr17 61847220 - Exonic hg38 BRCA TCGA-AR-A0TQ-01A 4 13 In-Frame Intra-chr q21.33 q23.2 Oncogene Seq+ 84665 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB7-BRIP1 GRB7 chr17 39745788 + BRIP1 chr17 61857231 - Exonic hg38 BRCA TCGA-AR-A0TQ-01A 3 10 In-Frame Intra-chr q12 q23.2 Oncogene Seq+ 84666 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN1-MIR646HG PTPN1 chr20 50510590 + MIR646HG chr20 60180835 + Exonic hg38 BRCA TCGA-AR-A0TQ-01A 1 16 5'UTR-5'UTR Intra-chr q13.13 Tumor suppressor gene q13.33 84667 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFX3-SLC24A2 RFX3 chr9 3330259 - SLC24A2 chr9 19622299 - Exonic hg38 BRCA TCGA-AR-A0TQ-01A 2 2 In-Frame Intra-chr p24.2 Transcription factor p22.1 Seq+ 84668 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF114-PTPN1 RNF114 chr20 49949355 + PTPN1 chr20 50561363 + Exonic hg38 BRCA TCGA-AR-A0TQ-01A 1 3 In-Frame Intra-chr q13.13 q13.13 Tumor suppressor gene 84669 ChimerSeq TCGA FAWG TCGA_RNA-Seq VGLL4-SYNPR VGLL4 chr3 11702971 - SYNPR chr3 63556543 + Exonic hg38 BRCA TCGA-AR-A0TS-01A 22 42 Out-of-frame Intra-chr p25.2 p14.2 Seq+ 84670 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNL2-DNAH3 GNL2 chr1 37595759 - DNAH3 chr16 21117339 - Exonic hg38 BRCA TCGA-AR-A0TS-01A 15 52 Out-of-frame Inter-chr p34.3 p12.3 Seq+ 84671 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSN1-SOGA1 DSN1 chr20 36754763 - SOGA1 chr20 36786637 - Exonic hg38 BRCA TCGA-AR-A0TS-01A 13 41 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 84672 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXO3-PPP1R9A FOXO3 chr6 108561829 + PPP1R9A chr7 95247473 + Exonic hg38 BRCA TCGA-AR-A0TS-01A 4 27 In-Frame Inter-chr q21 Oncogene Tumor suppressor gene Transcription factor q21.3 Seq+ 84673 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRK2-IQGAP1 GRK2 chr11 67266812 + IQGAP1 chr15 90426110 + Exonic hg38 BRCA TCGA-AR-A0TS-01A 1 31 In-Frame Inter-chr q13.2 q26.1 84674 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP13-MAP3K21 USP13 chr3 179653393 + MAP3K21 chr1 233382305 + Exonic hg38 BRCA TCGA-AR-A0TS-01A 5 15 Out-of-frame Inter-chr q26.33 q42.2 84675 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R9A-FOXO3 PPP1R9A chr7 95226116 + FOXO3 chr6 108663455 + Exonic hg38 BRCA TCGA-AR-A0TS-01A 4 17 In-Frame Inter-chr q21.3 q21 Oncogene Tumor suppressor gene Transcription factor Seq+ 84676 ChimerSeq TCGA FAWG TCGA_RNA-Seq U2AF2-RERE U2AF2 chr19 55661189 + RERE chr1 8365974 - Exonic hg38 BRCA TCGA-AR-A0TS-01A 2 20 In-Frame Inter-chr q13.42 p36.23 Seq+ 84677 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDXK-RRP1B PDXK chr21 43734123 + RRP1B chr21 43669884 + Exonic hg38 BRCA TCGA-AR-A0TS-01A 1 5 In-Frame Intra-chr q22.3 q22.3 Seq+ 84678 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTF1-SF3A3 MTF1 chr1 37857251 - SF3A3 chr1 37969735 - Exonic hg38 BRCA TCGA-AR-A0TT-01A 20 68 In-Frame Intra-chr p34.3 Transcription factor p34.3 Seq+ 84679 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPKAPK2-NBPF13P MAPKAPK2 chr1 206685508 + NBPF13P chr1 147116319 - Exonic hg38 BRCA TCGA-AR-A0TT-01A 21 42 CDS-5'UTR Intra-chr q32.1 CAMK:MAPKAPK q21.1 Seq+ 84680 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP95-RGS9 CEP95 chr17 64526199 + RGS9 chr17 65117054 + Exonic hg38 BRCA TCGA-AR-A0TT-01A 21 39 Out-of-frame Intra-chr q23.3 q24.1 84681 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH1L-FAM78B ASH1L chr1 155395459 - FAM78B chr1 166070763 - Exonic hg38 BRCA TCGA-AR-A0TT-01A 12 19 Out-of-frame Intra-chr q22 Transcription factor q24.1 Seq+ 84682 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFNA3-USP21 EFNA3 chr1 155086205 + USP21 chr1 161160620 + Exonic hg38 BRCA TCGA-AR-A0TT-01A 7 35 Out-of-frame Intra-chr q21.3 q23.3 Seq+ 84683 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP21-IL19 USP21 chr1 161164958 + IL19 chr1 206842659 + Exonic hg38 BRCA TCGA-AR-A0TT-01A 3 48 Out-of-frame Intra-chr q23.3 q32.1 Seq+ 84684 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2Q1-MAEL UBE2Q1 chr1 154552736 - MAEL chr1 167005076 + Exonic hg38 BRCA TCGA-AR-A0TT-01A 5 22 Out-of-frame Intra-chr q21.3 q24.1 Seq+ 84685 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCSER2-MBL3P CCSER2 chr10 84373815 + MBL3P chr10 79584376 - Exonic hg38 BRCA TCGA-AR-A0TT-01A 4 25 Out-of-frame Intra-chr q23.1 q22.3 Seq+ 84686 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAK16-ANGPT2 MAK16 chr8 33490339 + ANGPT2 chr8 6532487 - Exonic hg38 BRCA TCGA-AR-A0TT-01A 6 13 In-Frame Intra-chr p12 p23.1 Seq+ 84687 ChimerSeq TCGA FAWG TCGA_RNA-Seq INPP5A-DLG2 INPP5A chr10 132650505 + DLG2 chr11 84534731 - Exonic hg38 BRCA TCGA-AR-A0TT-01A 3 15 In-Frame Inter-chr q26.3 q14.1 Seq+ 84688 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP8-MYO9B AKAP8 chr19 15379713 - MYO9B chr19 17101660 + Exonic hg38 BRCA TCGA-AR-A0TT-01A 2 11 CDS-5'UTR Intra-chr p13.12 Transcription factor p13.11 Seq+ 84689 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP8L-EFCAB3 AKAP8L chr19 15397150 - EFCAB3 chr17 62395068 + Exonic hg38 BRCA TCGA-AR-A0TT-01A 2 11 Out-of-frame Inter-chr p13.12 Transcription factor q23.2 Seq+ 84690 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP2B7P-ITPKC CYP2B7P chr19 40942206 + ITPKC chr19 40733160 + Exonic hg38 BRCA TCGA-AR-A0TT-01A 1 8 5'UTR-CDS Intra-chr q13.2 q13.2 84691 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGLN1-PGBD5 EGLN1 chr1 231420998 - PGBD5 chr1 230357321 - Exonic hg38 BRCA TCGA-AR-A0TT-01A 2 4 Out-of-frame Intra-chr q42.2 Tumor suppressor gene q42.13 Seq+ 84692 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIG3-KXD1 LIG3 chr17 34986131 + KXD1 chr19 18562036 + Exonic hg38 BRCA TCGA-AR-A0TT-01A 1 8 CDS-5'UTR Inter-chr q12 Tumor suppressor gene p13.11 84693 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB7B-FCAMR ZBTB7B chr1 155015814 + FCAMR chr1 206970220 - Exonic hg38 BRCA TCGA-AR-A0TT-01A 2 4 5'UTR-5'UTR Intra-chr q21.3 Transcription factor q32.1 84694 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDA1-TMIGD1 DDA1 chr19 17309657 + TMIGD1 chr17 30329529 - Exonic hg38 BRCA TCGA-AR-A0TT-01A 2 3 Out-of-frame Inter-chr p13.11 q11.2 84695 ChimerSeq TCGA FAWG TCGA_RNA-Seq DUSP12-NAV1 DUSP12 chr1 161750145 + NAV1 chr1 201780421 + Exonic hg38 BRCA TCGA-AR-A0TT-01A 1 7 In-Frame Intra-chr q23.3 q32.1 Seq+ 84696 ChimerSeq TCGA FAWG TCGA_RNA-Seq IZUMO2-CYTH2 IZUMO2 chr19 50158268 - CYTH2 chr19 48472325 + Exonic hg38 BRCA TCGA-AR-A0TT-01A 1 5 Out-of-frame Intra-chr q13.33 q13.33 84697 ChimerSeq TCGA FAWG TCGA_RNA-Seq BLZF1-MPC2 BLZF1 chr1 169369550 + MPC2 chr1 167924537 - Exonic hg38 BRCA TCGA-AR-A0TT-01A 1 3 In-Frame Intra-chr q24.2 q24.2 84698 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIPA1L3-ETHE1 SIPA1L3 chr19 38164906 + ETHE1 chr19 43511566 - Exonic hg38 BRCA TCGA-AR-A0TT-01A 1 3 Out-of-frame Intra-chr q13.13 q13.31 Seq+ 84699 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT18-CARM1P1 GALNT18 chr11 11621359 - CARM1P1 chr9 2948282 - Exonic hg38 BRCA TCGA-AR-A0TU-01A 9 17 Out-of-frame Inter-chr p15.4 p24.2 Seq+ 84700 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMCC1-ACTR10 TMCC1 chr3 129827803 - ACTR10 chr14 58202855 + Exonic hg38 BRCA TCGA-AR-A0TU-01A 7 13 Out-of-frame Inter-chr q22.1 q23.1 Seq+ 84701 ChimerSeq TCGA FAWG TCGA_RNA-Seq CARM1-SMARCA4 CARM1 chr19 10921127 + SMARCA4 chr19 11061784 + Exonic hg38 BRCA TCGA-AR-A0TU-01A 2 8 Out-of-frame Intra-chr p13.2 p13.2 Oncogene Tumor suppressor gene Seq+ 84702 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO10-NPR3 MYO10 chr5 16877609 - NPR3 chr5 32724698 + Exonic hg38 BRCA TCGA-AR-A0TU-01A 3 4 Out-of-frame Intra-chr p15.1 p13.3 Seq+ 84703 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANP32A-LRRC6 ANP32A chr15 68820698 - LRRC6 chr8 132638107 - Exonic hg38 BRCA TCGA-AR-A0TU-01A 2 5 Out-of-frame Inter-chr q23 Tumor suppressor gene q24.22 Seq+ 84704 ChimerSeq TCGA FAWG TCGA_RNA-Seq DEPDC5-GOLGA7B DEPDC5 chr22 31876265 + GOLGA7B chr10 97859458 + Exonic hg38 BRCA TCGA-AR-A0TU-01A 2 2 Out-of-frame Inter-chr q12.2 q24.2 84705 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC2-LTBP1 ZDHHC2 chr8 17156853 + LTBP1 chr2 33347367 + Exonic hg38 BRCA TCGA-AR-A0TU-01A 1 5 In-Frame Inter-chr p22 Tumor suppressor gene p22.3 Seq+ 84706 ChimerSeq TCGA FAWG TCGA_RNA-Seq LTBP1-ZDHHC2 LTBP1 chr2 33315269 + ZDHHC2 chr8 17184789 + Exonic hg38 BRCA TCGA-AR-A0TU-01A 1 4 In-Frame Inter-chr p22.3 p22 Tumor suppressor gene Seq+ 84707 ChimerSeq TCGA FAWG TCGA_RNA-Seq COX6C-ZFPM2 COX6C chr8 99887490 - ZFPM2 chr8 104895407 + Exonic hg38 BRCA TCGA-AR-A0TV-01A 10 124 3'UTR-5'UTR Intra-chr q22.2 q22.3 Transcription factor 84708 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP12-KCNB2 LRP12 chr8 104588819 - KCNB2 chr8 72567642 + Exonic hg38 BRCA TCGA-AR-A0TV-01A 8 22 CDS-5'UTR Intra-chr q22.3 q21.11 Seq+ 84709 ChimerSeq TCGA FAWG TCGA_RNA-Seq HECTD1-PRPF39 HECTD1 chr14 31205797 - PRPF39 chr14 45095221 + Exonic hg38 BRCA TCGA-AR-A0TV-01A 2 10 CDS-5'UTR Intra-chr q12 q21.2 Seq+ 84710 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTSS1-ZC2HC1A MTSS1 chr8 124562782 - ZC2HC1A chr8 78675787 + Exonic hg38 BRCA TCGA-AR-A0TV-01A 1 13 Out-of-frame Intra-chr q24.13 Tumor suppressor gene q21.13 84711 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTIF-LOXHD1 CTIF chr18 48539312 + LOXHD1 chr18 46509815 - Exonic hg38 BRCA TCGA-AR-A0TV-01A 1 10 3'UTR-CDS Intra-chr q21.1 84712 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRHL2-ZFHX4 GRHL2 chr8 101492789 + ZFHX4 chr8 76704043 + Exonic hg38 BRCA TCGA-AR-A0TV-01A 2 3 CDS-5'UTR Intra-chr q22.3 Transcription factor q21.13 Transcription factor Seq+ 84713 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF236-DTNA ZNF236 chr18 76928106 + DTNA chr18 34513515 + Exonic hg38 BRCA TCGA-AR-A0TV-01A 1 3 CDS-5'UTR Intra-chr q23 Transcription factor q12.1 84714 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX35-DNTTIP1 DHX35 chr20 38983776 + DNTTIP1 chr20 45810885 + Exonic hg38 BRCA TCGA-AR-A0TW-01A 13 68 In-Frame Intra-chr q11.23 q13.12 Transcription factor Seq+ 84715 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED23-KLHL32 MED23 chr6 131618407 - KLHL32 chr6 97041492 + Exonic hg38 BRCA TCGA-AR-A0TW-01A 11 62 In-Frame Intra-chr q23.2 q16.1 Seq+ 84716 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG5-RSPH10B ATG5 chr6 106248150 - RSPH10B chr7 5932875 - Exonic hg38 BRCA TCGA-AR-A0TW-01A 8 35 CDS-5'UTR Inter-chr q21 p22.1 Seq+ 84717 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR70-PLCXD3 WDR70 chr5 37516590 + PLCXD3 chr5 41313770 - Exonic hg38 BRCA TCGA-AR-A0TW-01A 5 36 In-Frame Intra-chr p13.2 p13.1 Seq+ 84718 ChimerSeq TCGA FAWG TCGA_RNA-Seq VAPB-CASS4 VAPB chr20 58389517 + CASS4 chr20 56458340 + Exonic hg38 BRCA TCGA-AR-A0TW-01A 8 21 Out-of-frame Intra-chr q13.32 q13.31 Seq+ 84719 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCY1-EYA4 ADCY1 chr7 45575182 + EYA4 chr6 133274716 + Exonic hg38 BRCA TCGA-AR-A0TW-01A 5 23 5'UTR-5'UTR Inter-chr p12.3 q23.2 Tumor suppressor gene Seq+ 84720 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D15-SEPHS1 TBC1D15 chr12 71873002 + SEPHS1 chr10 13319034 - Exonic hg38 BRCA TCGA-AR-A0TW-01A 3 14 Out-of-frame Inter-chr q21.1 p13 Seq+ 84721 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC9A8-RAE1 SLC9A8 chr20 49874821 + RAE1 chr20 57374607 + Exonic hg38 BRCA TCGA-AR-A0TW-01A 4 7 Out-of-frame Intra-chr q13.13 q13.31 Seq+ 84722 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPZB-C2orf88 CAPZB chr1 19485436 - C2orf88 chr2 190079954 + Exonic hg38 BRCA TCGA-AR-A0TW-01A 1 9 5'UTR-5'UTR Inter-chr p36.13 q32.2 84723 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAE1-C20orf85 RAE1 chr20 57374801 + C20orf85 chr20 58160661 + Exonic hg38 BRCA TCGA-AR-A0TW-01A 1 5 In-Frame Intra-chr q13.31 q13.32 84724 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFR-TARS ZFR chr5 32444229 - TARS chr5 33441046 + Exonic hg38 BRCA TCGA-AR-A0TW-01A 1000 1000 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 84725 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAU1-CTSA STAU1 chr20 49174195 - CTSA chr20 45891173 + Exonic hg38 BRCA TCGA-AR-A0TX-01A 81 667 5'UTR-5'UTR Intra-chr q13.13 q13.12 Seq+ 84726 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARA-ZNF595 RARA chr17 40331396 + ZNF595 chr4 59430 + Exonic hg38 BRCA TCGA-AR-A0TX-01A 123 439 Out-of-frame Inter-chr q21.2 Oncogene Transcription factor p16.3 Transcription factor Seq+ 84727 ChimerSeq TCGA FAWG TCGA_RNA-Seq PMEPA1-PTGIS PMEPA1 chr20 57709474 - PTGIS chr20 49514395 - Exonic hg38 BRCA TCGA-AR-A0TX-01A 21 66 Out-of-frame Intra-chr q13.31 q13.13 Seq+ 84728 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABAT-C16orf62 ABAT chr16 8674711 + C16orf62 chr16 19651976 + Exonic hg38 BRCA TCGA-AR-A0TX-01A 13 80 Out-of-frame Intra-chr p13.2 p12.3 Seq+ 84729 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM159-DNAH3 TMEM159 chr16 21174148 + DNAH3 chr16 21062683 - Exonic hg38 BRCA TCGA-AR-A0TX-01A 11 75 3'UTR-CDS Intra-chr p12.3 Seq+ 84730 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP23-ASIC2 ARHGAP23 chr17 38479883 + ASIC2 chr17 33024014 - Exonic hg38 BRCA TCGA-AR-A0TX-01A 23 9 3'UTR-CDS Intra-chr q12 q12 Seq+ 84731 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARFGEF2-FAM19A5 ARFGEF2 chr20 48922010 + FAM19A5 chr22 48646597 + Exonic hg38 BRCA TCGA-AR-A0TX-01A 3 69 Out-of-frame Inter-chr q13.13 q13.32 Seq+ 84732 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1H-USP15 PPM1H chr12 62934492 - USP15 chr12 62294179 + Exonic hg38 BRCA TCGA-AR-A0TX-01A 5 20 In-Frame Intra-chr q14.2 q14.1 Seq+ 84733 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNB1-MLLT6 CACNB1 chr17 39183713 - MLLT6 chr17 38722678 + Exonic hg38 BRCA TCGA-AR-A0TX-01A 2 21 CDS-3'UTR Intra-chr q12 q12 Seq+ 84734 ChimerSeq TCGA FAWG TCGA_RNA-Seq THRA-CACNB1 THRA chr17 40077039 + CACNB1 chr17 39191542 - Exonic hg38 BRCA TCGA-AR-A0TX-01A 3 12 Out-of-frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q12 Seq+ 84735 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1H-SRGAP1 PPM1H chr12 62832114 - SRGAP1 chr12 64142295 + Exonic hg38 BRCA TCGA-AR-A0TX-01A 4 7 In-Frame Intra-chr q14.2 q14.2 Seq+ 84736 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNB1-CDC6 CACNB1 chr17 39194884 - CDC6 chr17 40289408 + Exonic hg38 BRCA TCGA-AR-A0TX-01A 4 3 CDS-3'UTR Intra-chr q12 q21.2 Seq+ 84737 ChimerSeq TCGA FAWG TCGA_RNA-Seq COQ7-OSBPL2 COQ7 chr16 19075860 + OSBPL2 chr20 62256057 + Exonic hg38 BRCA TCGA-AR-A0TX-01A 2 7 5'UTR-5'UTR Inter-chr p12.3 q13.33 Seq+ 84738 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP15-CDH4 USP15 chr12 62355475 + CDH4 chr20 61743563 + Exonic hg38 BRCA TCGA-AR-A0TX-01A 1 5 CDS-3'UTR Inter-chr q14.1 q13.33 Tumor suppressor gene 84739 ChimerSeq TCGA FAWG TCGA_RNA-Seq RMDN1-ESRP1 RMDN1 chr8 86506995 - ESRP1 chr8 94662501 + Exonic hg38 BRCA TCGA-AR-A0TY-01A 81 254 In-Frame Intra-chr q21.3 q22.1 Tumor suppressor gene Seq+ 84740 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK1-EFCAB5 TAOK1 chr17 29517656 + EFCAB5 chr17 30091871 + Exonic hg38 BRCA TCGA-AR-A0TY-01A 12 27 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 84741 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A11-ENPP7 SLC39A11 chr17 73092571 - ENPP7 chr17 79733597 + Exonic hg38 BRCA TCGA-AR-A0TY-01A 3 45 Out-of-frame Intra-chr q25.1 q25.3 Seq+ 84742 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNFRSF10A-BIN3 TNFRSF10A chr8 23212116 - BIN3 chr8 22644803 - Exonic hg38 BRCA TCGA-AR-A0TY-01A 5 22 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.3 Seq+ 84743 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSMAF-DEPTOR NSMAF chr8 58623220 - DEPTOR chr8 119928400 + Exonic hg38 BRCA TCGA-AR-A0TY-01A 3 5 In-Frame Intra-chr q12.1 q24.12 Seq+ 84744 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYBL1-MMP16 MYBL1 chr8 66572482 - MMP16 chr8 88074743 - Exonic hg38 BRCA TCGA-AR-A0TY-01A 2 1 In-Frame Intra-chr q13.1 Transcription factor q21.3 Seq+ 84745 ChimerSeq TCGA FAWG TCGA_RNA-Seq OXNAD1-LRRTM4 OXNAD1 chr3 16286448 + LRRTM4 chr2 76748916 - Exonic hg38 BRCA TCGA-AR-A0TZ-01A 16 38 Out-of-frame Inter-chr p25.1 p12 Seq+ 84746 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEMT-NEU3 PEMT chr17 17591531 - NEU3 chr11 74994509 + Exonic hg38 BRCA TCGA-AR-A0TZ-01A 3 13 Out-of-frame Inter-chr p11.2 q13.4 Seq+ 84747 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASXL2-FKBP8 ASXL2 chr2 25845481 - FKBP8 chr19 18541998 - Exonic hg38 BRCA TCGA-AR-A0U0-01A 11 34 CDS-5'UTR Inter-chr p23.3 p13.11 Seq+ 84748 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13B-DACH1 VPS13B chr8 99521010 + DACH1 chr13 71440692 - Exonic hg38 BRCA TCGA-AR-A0U0-01A 1 5 Out-of-frame Inter-chr q22.2 q21.33 Tumor suppressor gene Transcription factor 84749 ChimerSeq TCGA FAWG TCGA_RNA-Seq PWWP2A-IQGAP2 PWWP2A chr5 160118805 - IQGAP2 chr5 76562396 + Exonic hg38 BRCA TCGA-AR-A0U2-01A 17 44 In-Frame Intra-chr q33.3 q13.3 Tumor suppressor gene Seq+ 84750 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF3-SYTL5 TCF3 chr19 1615285 - SYTL5 chrX 38126588 + Exonic hg38 BRCA TCGA-AR-A0U3-01A 28 69 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p11.4 Seq+ 84751 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF613-CYP2A6 ZNF613 chr19 51929896 + CYP2A6 chr19 40850351 - Exonic hg38 BRCA TCGA-AR-A0U3-01A 6 104 5'UTR-CDS Intra-chr q13.41 Transcription factor q13.2 Seq+ 84752 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM118B-DDX25 FAM118B chr11 126211830 + DDX25 chr11 125921191 + Exonic hg38 BRCA TCGA-AR-A0U3-01A 6 2 5'UTR-CDS Intra-chr q24.2 q24.2 Seq+ 84753 ChimerSeq TCGA FAWG TCGA_RNA-Seq EID2-C19orf54 EID2 chr19 39539529 - C19orf54 chr19 40751481 - Exonic hg38 BRCA TCGA-AR-A0U3-01A 4 9 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 84754 ChimerSeq TCGA FAWG TCGA_RNA-Seq TYW1-OT1 TYW1 chr7 67067403 + OT1 chr21 17767698 - Exonic hg38 BRCA TCGA-AR-A0U3-01A 3 10 Out-of-frame Inter-chr q11.21 84755 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC20A2-TUSC3 SLC20A2 chr8 42501031 - TUSC3 chr8 15673747 + Exonic hg38 BRCA TCGA-AR-A0U3-01A 1 16 5'UTR-CDS Intra-chr p11.21 p22 Seq+ 84756 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF18-INSR ARHGEF18 chr19 7444454 + INSR chr19 7267896 - Exonic hg38 BRCA TCGA-AR-A0U3-01A 4 2 Out-of-frame Intra-chr p13.2 p13.2 TK:InsR Seq+ 84757 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP5S1-RNF24 AP5S1 chr20 3822293 + RNF24 chr20 3948279 - Exonic hg38 BRCA TCGA-AR-A0U3-01A 3 4 In-Frame Intra-chr p13 p13 Seq+ 84758 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF24-ISM1 RNF24 chr20 3945177 - ISM1 chr20 13279634 + Exonic hg38 BRCA TCGA-AR-A0U3-01A 2 6 In-Frame Intra-chr p13 p12.1 Seq+ 84759 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMX1-C14orf166 TMX1 chr14 51249765 + C14orf166 chr14 51999708 + Exonic hg38 BRCA TCGA-AR-A0U3-01A 2 5 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 84760 ChimerSeq TCGA FAWG TCGA_RNA-Seq EVL-TRAF3 EVL chr14 100097658 + TRAF3 chr14 102830334 + Exonic hg38 BRCA TCGA-AR-A0U3-01A 2 4 CDS-5'UTR Intra-chr q32.2 q32.32 Seq+ 84761 ChimerSeq TCGA FAWG TCGA_RNA-Seq CWC25-FBXO47 CWC25 chr17 38809702 - FBXO47 chr17 38943736 - Exonic hg38 BRCA TCGA-AR-A0U3-01A 1 5 5'UTR-CDS Intra-chr q12 q12 Seq+ 84762 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGP-ESR1 MGP chr12 14884213 - ESR1 chr6 151944173 + Exonic hg38 BRCA TCGA-AR-A0U3-01A 1 4 In-Frame Inter-chr p12.3 q25.1 Oncogene Tumor suppressor gene Transcription factor 84763 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPNS1-GLUL CAPNS1 chr19 36142333 + GLUL chr1 182386402 - Exonic hg38 BRCA TCGA-AR-A0U3-01A 1 1 Out-of-frame Inter-chr q13.12 q25.3 84764 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYRK1A-TTC3 DYRK1A chr21 37367628 + TTC3 chr21 37108392 + Exonic hg38 BRCA TCGA-AR-A0U3-01A 1 1 5'UTR-5'UTR Intra-chr q22.13 CMGC:DYRK q22.13 Seq+ 84765 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC1-EBLN1 DNAJC1 chr10 21920795 - EBLN1 chr10 22210021 - Exonic hg38 BRCA TCGA-AR-A0U3-01A 1000 1000 Out-of-frame Intra-chr p12.31 p12.31 Seq+ 84766 ChimerSeq TCGA FAWG TCGA_RNA-Seq WAC-LRRC37A6P WAC chr10 28535757 + LRRC37A6P chr10 27246697 - Exonic hg38 BRCA TCGA-AR-A0U4-01A 32 116 CDS-3'UTR Intra-chr p12.1 p12.1 Seq+ 84767 ChimerSeq TCGA FAWG TCGA_RNA-Seq HERC4-RUFY2 HERC4 chr10 68032778 - RUFY2 chr10 68345911 - Exonic hg38 BRCA TCGA-AR-A0U4-01A 16 29 In-Frame Intra-chr q21.3 q21.3 Seq+ 84768 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHTF2-RAB1A PHTF2 chr7 77840300 + RAB1A chr2 65089070 - Exonic hg38 BRCA TCGA-AR-A0U4-01A 16 29 In-Frame Inter-chr q11.23 p14 Seq+ 84769 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM245-FRRS1L TMEM245 chr9 109106508 - FRRS1L chr9 109149720 - Exonic hg38 BRCA TCGA-AR-A0U4-01A 10 33 In-Frame Intra-chr q31.3 q31.3 Seq+ 84770 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZKSCAN5-SMO ZKSCAN5 chr7 99512591 + SMO chr7 129203384 + Exonic hg38 BRCA TCGA-AR-A0U4-01A 8 41 In-Frame Intra-chr q22.1 Transcription factor q32.1 Oncogene Seq+ 84771 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRMT2-DIP2A PRMT2 chr21 46644488 + DIP2A chr21 46565713 + Exonic hg38 BRCA TCGA-AR-A0U4-01A 12 23 In-Frame Intra-chr q22.3 q22.3 Seq+ 84772 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB1A-PHTF2 RAB1A chr2 65097971 - PHTF2 chr7 77893608 + Exonic hg38 BRCA TCGA-AR-A0U4-01A 7 28 In-Frame Inter-chr p14 q11.23 Seq+ 84773 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCH2-PRKCZ PLCH2 chr1 2430629 + PRKCZ chr1 2135262 + Exonic hg38 BRCA TCGA-AR-A0U4-01A 6 20 3'UTR-CDS Intra-chr p36.32 p36.33 84774 ChimerSeq TCGA FAWG TCGA_RNA-Seq FTSJ3-SCN4A FTSJ3 chr17 63820079 - SCN4A chr17 63941993 - Exonic hg38 BRCA TCGA-AR-A0U4-01A 6 10 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 84775 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLGA2P10-FSD2 GOLGA2P10 chr15 82513666 - FSD2 chr15 82766031 - Exonic hg38 BRCA TCGA-AR-A0U4-01A 3 13 3'UTR-CDS Intra-chr q25.2 q25.2 84776 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL3-ATP9B BCL3 chr19 44748128 + ATP9B chr18 79253381 + Exonic hg38 BRCA TCGA-AR-A0U4-01A 5 4 5'UTR-5'UTR Inter-chr q13.32 Oncogene Seq+ 84777 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIMA1-TRAPPC9 LIMA1 chr12 50248633 - TRAPPC9 chr8 139988836 - Exonic hg38 BRCA TCGA-AR-A0U4-01A 4 8 In-Frame Inter-chr q13.12 Tumor suppressor gene q24.3 Seq+ 84778 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEK7-CRB1 NEK7 chr1 198157276 + CRB1 chr1 197328422 + Exonic hg38 BRCA TCGA-AR-A0U4-01A 4 6 5'UTR-5'UTR Intra-chr q31.3 Other:NEK q31.3 Seq+ 84779 ChimerSeq TCGA FAWG TCGA_RNA-Seq CP-WWTR1 CP chr3 149188052 - WWTR1 chr3 149669891 - Exonic hg38 BRCA TCGA-AR-A0U4-01A 2 12 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 84780 ChimerSeq TCGA FAWG TCGA_RNA-Seq CARMIL1-MRS2 CARMIL1 chr6 25284909 + MRS2 chr6 24405168 + Exonic hg38 BRCA TCGA-AR-A0U4-01A 2 7 Out-of-frame Intra-chr p22.2 p22.3 84781 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDZRN3-FCAMR PDZRN3 chr3 73602354 - FCAMR chr1 206970220 - Exonic hg38 BRCA TCGA-AR-A0U4-01A 1 8 CDS-5'UTR Inter-chr p13 q32.1 Seq+ 84782 ChimerSeq TCGA FAWG TCGA_RNA-Seq VILL-CTDSPL VILL chr3 37999439 + CTDSPL chr3 37957111 + Exonic hg38 BRCA TCGA-AR-A0U4-01A 1 2 In-Frame Intra-chr p22.2 p22.2 Tumor suppressor gene 84783 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRIG3-PIP4K2C LRIG3 chr12 58913982 - PIP4K2C chr12 57602971 + Exonic hg38 BRCA TCGA-AR-A1AH-01A 25 123 CDS-3'UTR Intra-chr q14.1 Tumor suppressor gene q13.3 Seq+ 84784 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF4-TCFL5 TAF4 chr20 61997550 - TCFL5 chr20 62857635 - Exonic hg38 BRCA TCGA-AR-A1AH-01A 7 64 5'UTR-CDS Intra-chr q13.33 Transcription factor Seq+ 84785 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLG1-ANKRD18DP DLG1 chr3 197282679 - ANKRD18DP chr3 198065806 - Exonic hg38 BRCA TCGA-AR-A1AH-01A 2 37 3'UTR-3'UTR Intra-chr q29 Tumor suppressor gene q29 Seq+ 84786 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCNX2-TAOK3 PCNX2 chr1 233135015 - TAOK3 chr12 118201465 - Exonic hg38 BRCA TCGA-AR-A1AH-01A 5 15 Out-of-frame Inter-chr q42.2 q24.23 84787 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC91-ETFRF1 CCDC91 chr12 28391411 + ETFRF1 chr12 25204091 + Exonic hg38 BRCA TCGA-AR-A1AH-01A 5 13 In-Frame Intra-chr p11.22 p12.1 84788 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEBL-DNAJC1 NEBL chr10 20888097 - DNAJC1 chr10 21766309 - Exonic hg38 BRCA TCGA-AR-A1AH-01A 3 10 In-Frame Intra-chr p12.31 p12.31 Seq+ 84789 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRICKLE1-FGD4 PRICKLE1 chr12 42589465 - FGD4 chr12 32638655 + Exonic hg38 BRCA TCGA-AR-A1AH-01A 4 5 5'UTR-CDS Intra-chr q12 Tumor suppressor gene p11.21 Seq+ 84790 ChimerSeq TCGA FAWG TCGA_RNA-Seq AACS-DNAH10 AACS chr12 125114557 + DNAH10 chr12 123934621 + Exonic hg38 BRCA TCGA-AR-A1AH-01A 2 9 CDS-3'UTR Intra-chr q24.31 Seq+ 84791 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASB1-TRAF3IP1 ASB1 chr2 238433695 + TRAF3IP1 chr2 238397459 + Exonic hg38 BRCA TCGA-AR-A1AH-01A 1 4 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 84792 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRIG3-DTX3 LRIG3 chr12 58913982 - DTX3 chr12 57609077 + Exonic hg38 BRCA TCGA-AR-A1AH-01A 1 4 In-Frame Intra-chr q14.1 Tumor suppressor gene q13.3 84793 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCND3-GUCA1B CCND3 chr6 42048501 - GUCA1B chr6 42188731 - Exonic hg38 BRCA TCGA-AR-A1AI-01A 22 40 5'UTR-CDS Intra-chr p21.1 p21.1 Seq+ 84794 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1A-NUDC ARID1A chr1 26762319 + NUDC chr1 26911128 + Exonic hg38 BRCA TCGA-AR-A1AI-01A 8 60 CDS-5'UTR Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 Seq+ 84795 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBNO1-EIF2B1 SBNO1 chr12 123364701 - EIF2B1 chr12 123632446 - Exonic hg38 BRCA TCGA-AR-A1AI-01A 10 41 5'UTR-CDS Intra-chr q24.31 q24.31 84796 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELP2-GALNT1 ELP2 chr18 36133316 + GALNT1 chr18 35654560 + Exonic hg38 BRCA TCGA-AR-A1AI-01A 12 24 5'UTR-5'UTR Intra-chr q12.2 q12.2 Seq+ 84797 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNPO3-RCAN1 TNPO3 chr7 128974868 - RCAN1 chr21 34523710 - Exonic hg38 BRCA TCGA-AR-A1AI-01A 3 6 Out-of-frame Inter-chr q32.1 q22.12 Seq+ 84798 ChimerSeq TCGA FAWG TCGA_RNA-Seq NMUR1-PDE6D NMUR1 chr2 231530359 - PDE6D chr2 231739202 - Exonic hg38 BRCA TCGA-AR-A1AI-01A 3 2 CDS-3'UTR Intra-chr q37.1 q37.1 Seq+ 84799 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADK-RPP38 ADK chr10 74176886 + RPP38 chr10 15111686 + Exonic hg38 BRCA TCGA-AR-A1AI-01A 2 3 CDS-3'UTR Intra-chr q22.2 p13 84800 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYAP1-REPS2 SYAP1 chrX 16719899 + REPS2 chrX 17006221 + Exonic hg38 BRCA TCGA-AR-A1AI-01A 1 5 Out-of-frame Intra-chr p22.2 p22.2 84801 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL18A1-9 COL18A1 chr21 45488444 + 9 chr21 44628067 + Exonic hg38 BRCA TCGA-AR-A1AI-01A 1 1 Out-of-frame Intra-chr q22.3 84802 ChimerSeq TCGA FAWG TCGA_RNA-Seq NLK-LGALS9 NLK chr17 28043331 + LGALS9 chr17 27640572 + Exonic hg38 BRCA TCGA-AR-A1AJ-01A 6 35 In-Frame Intra-chr q11.2 CMGC:MAPK q11.2 Seq+ 84803 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF170-GOLGA7 RNF170 chr8 42870004 - GOLGA7 chr8 41497509 + Exonic hg38 BRCA TCGA-AR-A1AJ-01A 2 15 Out-of-frame Intra-chr p11.21 p11.21 Seq+ 84804 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNRF2-MTURN ZNRF2 chr7 30323737 + MTURN chr7 30157438 + Exonic hg38 BRCA TCGA-AR-A1AJ-01A 2 7 Out-of-frame Intra-chr p14.3 p14.3 84805 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARP16-PHF13 PARP16 chr15 65259464 - PHF13 chr1 6616757 + Exonic hg38 BRCA TCGA-AR-A1AK-01A 1 1 Out-of-frame Inter-chr q22.31 p36.31 84806 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELMO2-STAP1 ELMO2 chr20 46380253 - STAP1 chr4 67575385 + Exonic hg38 BRCA TCGA-AR-A1AN-01A 16 64 In-Frame Inter-chr q13.12 q13.2 Seq+ 84807 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFRP1-ARMC5 SFRP1 chr8 41303461 - ARMC5 chr16 31461922 + Exonic hg38 BRCA TCGA-AR-A1AN-01A 4 11 In-Frame Inter-chr p11.21 Tumor suppressor gene p11.2 Tumor suppressor gene Seq+ 84808 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAU1-MRPL4 STAU1 chr20 49174195 - MRPL4 chr19 10252397 + Exonic hg38 BRCA TCGA-AR-A1AO-01A 19 100 5'UTR-CDS Inter-chr q13.13 p13.2 Seq+ 84809 ChimerSeq TCGA FAWG TCGA_RNA-Seq MET-DYNC1I1 MET chr7 116731859 + DYNC1I1 chr7 95804721 + Exonic hg38 BRCA TCGA-AR-A1AO-01A 6 7 CDS-5'UTR Intra-chr q31.2 TK:Met Oncogene q21.3 Seq+ 84810 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPLOC4-NOTUM NPLOC4 chr17 81636916 - NOTUM chr17 81954303 - Exonic hg38 BRCA TCGA-AR-A1AO-01A 7 3 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 84811 ChimerSeq TCGA FAWG TCGA_RNA-Seq WBP1L-ARL3 WBP1L chr10 102744143 + ARL3 chr10 102705489 - Exonic hg38 BRCA TCGA-AR-A1AO-01A 5 9 In-Frame Intra-chr q24.32 q24.32 Seq+ 84812 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAXBP1-TP53I3 PAXBP1 chr21 32759080 - TP53I3 chr2 24077761 - Exonic hg38 BRCA TCGA-AR-A1AO-01A 2 4 In-Frame Inter-chr p23.3 Seq+ 84813 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR76-PDIA3 WDR76 chr15 43836216 + PDIA3 chr15 43761424 + Exonic hg38 BRCA TCGA-AR-A1AO-01A 2 1 Out-of-frame Intra-chr q15.3 q15.3 Seq+ 84814 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATA3-TAF3 GATA3 chr10 8069598 + TAF3 chr10 8013731 + Exonic hg38 BRCA TCGA-AR-A1AP-01A 138 499 In-Frame Intra-chr p14 Oncogene Transcription factor p14 Seq+ 84815 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLNS1A-TRIM49C CLNS1A chr11 77637590 - TRIM49C chr11 90032397 + Exonic hg38 BRCA TCGA-AR-A1AP-01A 5 27 CDS-5'UTR Intra-chr q14.1 q14.3 Seq+ 84816 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTLL5-TSHR TTLL5 chr14 75820161 + TSHR chr14 81062148 + Exonic hg38 BRCA TCGA-AR-A1AP-01A 4 25 In-Frame Intra-chr q24.3 q31.1 Oncogene Seq+ 84817 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCTN5-UBFD1 DCTN5 chr16 23643023 + UBFD1 chr16 23570480 + Exonic hg38 BRCA TCGA-AR-A1AP-01A 1 19 In-Frame Intra-chr p12.2 p12.2 84818 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN2-CCDC59 ATXN2 chr12 111552280 - CCDC59 chr12 82308315 - Exonic hg38 BRCA TCGA-AR-A1AP-01A 2 4 3'UTR-3'UTR Intra-chr q24.12 q21.31 Seq+ 84819 ChimerSeq TCGA FAWG TCGA_RNA-Seq CABLES1-TTC39C CABLES1 chr18 23214054 + TTC39C chr18 24064140 + Exonic hg38 BRCA TCGA-AR-A1AP-01A 1 7 In-Frame Intra-chr q11.2 Tumor suppressor gene q11.2 84820 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KA5-HOXB2 RPS6KA5 chr14 90978306 - HOXB2 chr17 48543747 - Exonic hg38 BRCA TCGA-AR-A1AP-01A 1 1 In-Frame Inter-chr q32.11 q21.32 Transcription factor 84821 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLIN3-ARRDC5 PLIN3 chr19 4859590 - ARRDC5 chr19 4891573 - Exonic hg38 BRCA TCGA-AR-A1AQ-01A 27 73 In-Frame Intra-chr p13.3 p13.3 Seq+ 84822 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBF1-PLXNB2 SBF1 chr22 50461523 - PLXNB2 chr22 50284665 - Exonic hg38 BRCA TCGA-AR-A1AQ-01A 3 5 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 84823 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR89A-RNF115 GPR89A chr1 145608175 + RNF115 chr1 145788966 - Exonic hg38 BRCA TCGA-AR-A1AR-01A 18 64 In-Frame Intra-chr q21.1 q21.1 Seq+ 84824 ChimerSeq TCGA FAWG TCGA_RNA-Seq C6orf62-KIAA0319 C6orf62 chr6 24708777 - KIAA0319 chr6 24601208 - Exonic hg38 BRCA TCGA-AR-A1AR-01A 12 44 CDS-5'UTR Intra-chr p22.3 p22.3 Seq+ 84825 ChimerSeq TCGA FAWG TCGA_RNA-Seq FUBP1-SLC44A5 FUBP1 chr1 77978885 - SLC44A5 chr1 75300685 - Exonic hg38 BRCA TCGA-AR-A1AR-01A 4 8 Out-of-frame Intra-chr p31.1 Oncogene p31.1 Seq+ 84826 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2CD5-PLCZ1 C2CD5 chr12 22482557 - PLCZ1 chr12 18737509 - Exonic hg38 BRCA TCGA-AR-A1AR-01A 1 12 CDS-5'UTR Intra-chr p12.1 p12.3 84827 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCZ1-PTHLH PLCZ1 chr12 18694910 - PTHLH chr12 27958568 - Exonic hg38 BRCA TCGA-AR-A1AR-01A 3 2 Out-of-frame Intra-chr p12.3 p11.22 Seq+ 84828 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT6A-ADAM2 KAT6A chr8 41955296 - ADAM2 chr8 39837212 - Exonic hg38 BRCA TCGA-AR-A1AR-01A 2 4 CDS-5'UTR Intra-chr p11.21 Oncogene Seq+ 84829 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLFN12-PSMD3 SLFN12 chr17 35430500 - PSMD3 chr17 39995193 + Exonic hg38 BRCA TCGA-AR-A1AT-01A 70 141 Out-of-frame Intra-chr q12 q21.1 Seq+ 84830 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSH2-CDK12 SSH2 chr17 29929938 - CDK12 chr17 39551038 + Exonic hg38 BRCA TCGA-AR-A1AT-01A 14 29 CDS-3'UTR Intra-chr q11.2 q12 Oncogene 84831 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1orf132-GRIK3 C1orf132 chr1 207867926 - GRIK3 chr1 36891096 - Exonic hg38 BRCA TCGA-AR-A1AT-01A 5 24 Out-of-frame Intra-chr q32.2 p34.3 Seq+ 84832 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPD-ADAP2 CPD chr17 30385236 + ADAP2 chr17 30954478 + Exonic hg38 BRCA TCGA-AR-A1AT-01A 4 10 Out-of-frame Intra-chr q11.2 Tumor suppressor gene q11.2 Seq+ 84833 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOOK3-TADA2A HOOK3 chr8 43018494 + TADA2A chr17 37470400 + Exonic hg38 BRCA TCGA-AR-A1AT-01A 2 11 CDS-3'UTR Inter-chr p11.21 Oncogene q12 Seq+ 84834 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASL10B-USP22 RASL10B chr17 35731878 + USP22 chr17 21007996 - Exonic hg38 BRCA TCGA-AR-A1AT-01A 2 9 5'UTR-CDS Intra-chr q12 Tumor suppressor gene p11.2 84835 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSSK3-LAD1 TSSK3 chr1 32353541 + LAD1 chr1 201377678 - Exonic hg38 BRCA TCGA-AR-A1AT-01A 1 8 Out-of-frame Intra-chr p35.1 CAMK:TSSK q32.1 84836 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-PIP4K2B FBXL20 chr17 39401361 - PIP4K2B chr17 38771272 - Exonic hg38 BRCA TCGA-AR-A1AT-01A 1 7 CDS-5'UTR Intra-chr q12 q12 84837 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAST2-CHIT1 MAST2 chr1 45882395 + CHIT1 chr1 203240658 - Exonic hg38 BRCA TCGA-AR-A1AT-01A 1 7 5'UTR-5'UTR Intra-chr p34.1 AGC:MAST q32.1 Seq+ 84838 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG5-TMEM200A ATG5 chr6 106325526 - TMEM200A chr6 130440407 + Exonic hg38 BRCA TCGA-AR-A1AU-01A 4 25 5'UTR-5'UTR Intra-chr q21 q23.1 Seq+ 84839 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD7-ASPH CHD7 chr8 60743097 + ASPH chr8 61684188 - Exonic hg38 BRCA TCGA-AR-A1AU-01A 5 14 Out-of-frame Intra-chr q12.2 q12.3 Seq+ 84840 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAG17-PCF11 SPAG17 chr1 118185071 - PCF11 chr11 83161327 + Exonic hg38 BRCA TCGA-AR-A1AU-01A 4 11 In-Frame Inter-chr p12 q14.1 Seq+ 84841 ChimerSeq TCGA FAWG TCGA_RNA-Seq TASP1-HLCS TASP1 chr20 13559008 - HLCS chr21 36962170 - Exonic hg38 BRCA TCGA-AR-A1AU-01A 3 10 In-Frame Inter-chr p12.1 q22.13 Seq+ 84842 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXO3-CHD7 FOXO3 chr6 108561829 + CHD7 chr8 60741259 + Exonic hg38 BRCA TCGA-AR-A1AU-01A 2 4 CDS-5'UTR Inter-chr q21 Oncogene Tumor suppressor gene Transcription factor q12.2 Seq+ 84843 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13L-PRIM1 MED13L chr12 116237468 - PRIM1 chr12 56739363 - Exonic hg38 BRCA TCGA-AR-A1AV-01A 90 801 In-Frame Intra-chr q24.21 q13.3 Seq+ 84844 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO1-OR4D10 ANO1 chr11 70163431 + OR4D10 chr11 59477541 + Exonic hg38 BRCA TCGA-AR-A1AV-01A 31 213 Out-of-frame Intra-chr q13.3 q12.1 Seq+ 84845 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID2-ZNF641 ARID2 chr12 45731314 + ZNF641 chr12 48348115 - Exonic hg38 BRCA TCGA-AR-A1AV-01A 3 27 In-Frame Intra-chr q12 Oncogene Tumor suppressor gene Transcription factor q13.11 Transcription factor Seq+ 84846 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2CD3-RNF169 C2CD3 chr11 74168344 - RNF169 chr11 74789626 + Exonic hg38 BRCA TCGA-AR-A1AV-01A 4 9 In-Frame Intra-chr q13.4 q13.4 Seq+ 84847 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSMCE2-DCLRE1C NSMCE2 chr8 125102487 + DCLRE1C chr10 14899312 - Exonic hg38 BRCA TCGA-AR-A1AW-01A 5 41 Out-of-frame Inter-chr q24.13 p13 Seq+ 84848 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT14-OVOL2 KAT14 chr20 18162945 + OVOL2 chr20 17996752 - Exonic hg38 BRCA TCGA-AR-A1AW-01A 1 3 CDS-3'UTR Intra-chr p11.23 p11.23 Transcription factor 84849 ChimerSeq TCGA FAWG TCGA_RNA-Seq NMD3-CASD1 NMD3 chr3 161247330 + CASD1 chr7 94517560 + Exonic hg38 BRCA TCGA-AR-A1AW-01A 1 2 Out-of-frame Inter-chr q26.1 q21.3 84850 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOOK3-GPAT4 HOOK3 chr8 42925629 + GPAT4 chr8 41609416 + Exonic hg38 BRCA TCGA-AR-A1AX-01A 3 9 In-Frame Intra-chr p11.21 Oncogene p11.21 84851 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM2A-RPS6KB2 KDM2A chr11 67121358 + RPS6KB2 chr11 67433340 + Exonic hg38 BRCA TCGA-AR-A1AY-01A 55 239 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 84852 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBD2-DOCK2 MBD2 chr18 54188874 - DOCK2 chr5 170075947 + Exonic hg38 BRCA TCGA-AR-A1AY-01A 46 201 In-Frame Inter-chr q21.2 Transcription factor q35.1 Seq+ 84853 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX39B-PRPH2 DDX39B chr6 31538763 - PRPH2 chr6 42704611 - Exonic hg38 BRCA TCGA-AR-A1AY-01A 21 50 5'UTR-CDS Intra-chr p21.1 Seq+ 84854 ChimerSeq TCGA FAWG TCGA_RNA-Seq RECQL4-CPSF1 RECQL4 chr8 144514022 - CPSF1 chr8 144398214 - Exonic hg38 BRCA TCGA-AR-A1AY-01A 5 30 Out-of-frame Intra-chr q24.3 Oncogene q24.3 Seq+ 84855 ChimerSeq TCGA FAWG TCGA_RNA-Seq STX5-SLC22A6 STX5 chr11 62824166 - SLC22A6 chr11 62936486 - Exonic hg38 BRCA TCGA-AR-A1AY-01A 1 12 CDS-3'UTR Intra-chr q12.3 q12.3 84856 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCF11-SPON1 PCF11 chr11 83157631 + SPON1 chr11 14243332 + Exonic hg38 BRCA TCGA-AR-A24H-01A 33 120 In-Frame Intra-chr q14.1 p15.2 Seq+ 84857 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASXL2-HSPH1 ASXL2 chr2 25878166 - HSPH1 chr13 31158863 - Exonic hg38 BRCA TCGA-AR-A24H-01A 6 20 Out-of-frame Inter-chr p23.3 q12.3 Seq+ 84858 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF137P-TES ZNF137P chr19 52592228 + TES chr7 116249020 + Exonic hg38 BRCA TCGA-AR-A24H-01A 8 10 5'UTR-CDS Inter-chr q13.41 q31.2 Tumor suppressor gene 84859 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCFD2-SRBD1 MCFD2 chr2 46907810 - SRBD1 chr2 45419894 - Exonic hg38 BRCA TCGA-AR-A24H-01A 3 25 In-Frame Intra-chr p21 p21 Seq+ 84860 ChimerSeq TCGA FAWG TCGA_RNA-Seq TES-ZNF137P TES chr7 116234619 + ZNF137P chr19 52595617 + Exonic hg38 BRCA TCGA-AR-A24H-01A 1 12 CDS-5'UTR Inter-chr q31.2 Tumor suppressor gene q13.41 84861 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOX3-ITFG1 TOX3 chr16 52445994 - ITFG1 chr16 47162664 - Exonic hg38 BRCA TCGA-AR-A24K-01A 5 32 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 84862 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA7-SMPD1 PLEKHA7 chr11 17013989 - SMPD1 chr11 6393216 + Exonic hg38 BRCA TCGA-AR-A24K-01A 6 9 In-Frame Intra-chr p15.1 p15.4 Seq+ 84863 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLPB-MTUS2 CLPB chr11 72358880 - MTUS2 chr13 29100773 + Exonic hg38 BRCA TCGA-AR-A24K-01A 4 13 In-Frame Inter-chr q13.4 q12.3 Seq+ 84864 ChimerSeq TCGA FAWG TCGA_RNA-Seq B3GLCT-STK33 B3GLCT chr13 31215100 + STK33 chr11 8475066 - Exonic hg38 BRCA TCGA-AR-A24K-01A 2 10 CDS-5'UTR Inter-chr q12.3 p15.4 CAMK:CAMK-Unique 84865 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC16A9-ADK SLC16A9 chr10 59709479 - ADK chr10 74708321 + Exonic hg38 BRCA TCGA-AR-A24L-01A 61 183 5'UTR-5'UTR Intra-chr q21.2 q22.2 Seq+ 84866 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARAP1-INTS5 ARAP1 chr11 72752328 - INTS5 chr11 62649999 - Exonic hg38 BRCA TCGA-AR-A24L-01A 17 25 5'UTR-CDS Intra-chr q13.4 q12.3 Seq+ 84867 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPIN2-SLC39A6 LPIN2 chr18 3013087 - SLC39A6 chr18 36127016 - Exonic hg38 BRCA TCGA-AR-A24L-01A 5 2 5'UTR-5'UTR Intra-chr p11.31 q12.2 84868 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2B3-HYI EIF2B3 chr1 44926628 - HYI chr1 43452319 - Exonic hg38 BRCA TCGA-AR-A24L-01A 2 12 In-Frame Intra-chr p34.1 p34.2 Seq+ 84869 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCU-CHCHD1 MCU chr10 72834428 + CHCHD1 chr10 73783074 + Exonic hg38 BRCA TCGA-AR-A24L-01A 3 8 Out-of-frame Intra-chr q22.1 q22.2 Seq+ 84870 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARD6G-SLC14A2 PARD6G chr18 80202710 - SLC14A2 chr18 45483233 + Exonic hg38 BRCA TCGA-AR-A24L-01A 2 10 CDS-5'UTR Intra-chr q23 q12.3 Seq+ 84871 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIN52-BBOF1 LIN52 chr14 74101238 + BBOF1 chr14 74055584 + Exonic hg38 BRCA TCGA-AR-A24L-01A 2 7 Out-of-frame Intra-chr q24.3 q24.3 84872 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOR2-RABGAP1 NCOR2 chr12 124437930 - RABGAP1 chr9 123065348 + Exonic hg38 BRCA TCGA-AR-A24L-01A 1 5 In-Frame Inter-chr q24.31 q33.2 84873 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADK-KAT6B ADK chr10 74224591 + KAT6B chr10 74838683 + Exonic hg38 BRCA TCGA-AR-A24L-01A 1 1 CDS-3'UTR Intra-chr q22.2 Oncogene Seq+ 84874 ChimerSeq TCGA FAWG TCGA_RNA-Seq APP-TBK1 APP chr21 26170564 - TBK1 chr12 64455840 + Exonic hg38 BRCA TCGA-AR-A24M-01A 1 6 CDS-5'UTR Inter-chr q21.3 q14.2 Other:IKK 84875 ChimerSeq TCGA FAWG TCGA_RNA-Seq IQCB1-ILDR1 IQCB1 chr3 121790073 - ILDR1 chr3 121988408 - Exonic hg38 BRCA TCGA-AR-A24O-01A 1 4 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 84876 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBCD-SLC9A3R1 TBCD chr17 82889697 + SLC9A3R1 chr17 74762012 + Exonic hg38 BRCA TCGA-AR-A24O-01A 1 4 5'UTR-CDS Intra-chr q25.1 Tumor suppressor gene Seq+ 84877 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCM2-PPIA CCM2 chr7 45038426 + PPIA chr7 44799247 + Exonic hg38 BRCA TCGA-AR-A24O-01A 1 1 In-Frame Intra-chr p13 p13 Seq+ 84878 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANBP17-SPDL1 RANBP17 chr5 170881896 + SPDL1 chr5 169588394 + Exonic hg38 BRCA TCGA-AR-A24Q-01A 6 26 CDS-5'UTR Intra-chr q35.1 q35.1 Seq+ 84879 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A22-CHID1 SLC25A22 chr11 794458 - CHID1 chr11 874910 - Exonic hg38 BRCA TCGA-AR-A24Q-01A 7 18 Out-of-frame Intra-chr p15.5 p15.5 84880 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOX6-GALNT18 SOX6 chr11 16318446 - GALNT18 chr11 11379264 - Exonic hg38 BRCA TCGA-AR-A24Q-01A 7 12 In-Frame Intra-chr p15.2 Transcription factor p15.4 Seq+ 84881 ChimerSeq TCGA FAWG TCGA_RNA-Seq YWHAE-DDX11L16 YWHAE chr17 1400047 - DDX11L16 chrX 156027444 - Exonic hg38 BRCA TCGA-AR-A24Q-01A 6 11 5'UTR-5'UTR Inter-chr p13.3 q28 84882 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNAI3-CASQ2 GNAI3 chr1 109548838 + CASQ2 chr1 115744912 - Exonic hg38 BRCA TCGA-AR-A24Q-01A 3 16 Out-of-frame Intra-chr p13.3 p13.1 Seq+ 84883 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-RAD51B UVRAG chr11 76116015 + RAD51B chr14 68594485 + Exonic hg38 BRCA TCGA-AR-A24Q-01A 2 14 Out-of-frame Inter-chr q13.5 Tumor suppressor gene q24.1 Seq+ 84884 ChimerSeq TCGA FAWG TCGA_RNA-Seq C11orf80-FAM161B C11orf80 chr11 66759096 + FAM161B chr14 73942715 - Exonic hg38 BRCA TCGA-AR-A24Q-01A 3 2 In-Frame Inter-chr q13.2 q24.3 Seq+ 84885 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM170A-CHST6 TMEM170A chr16 75464468 - CHST6 chr16 75479844 - Exonic hg38 BRCA TCGA-AR-A24Q-01A 1 3 CDS-5'UTR Intra-chr q23.1 q23.1 84886 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF462-VEGFA ZNF462 chr9 106863355 + VEGFA chr6 43774341 + Exonic hg38 BRCA TCGA-AR-A24Q-01A 1 3 5'UTR-5'UTR Inter-chr q31.2 Transcription factor p21.1 Tumor suppressor gene 84887 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD51B-UVRAG RAD51B chr14 68468250 + UVRAG chr11 76140711 + Exonic hg38 BRCA TCGA-AR-A24Q-01A 1 2 Out-of-frame Inter-chr q24.1 q13.5 Tumor suppressor gene Seq+ 84888 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMBR1-EPHA1 LMBR1 chr7 156796390 - EPHA1 chr7 143401606 - Exonic hg38 BRCA TCGA-AR-A24Q-01A 1000 1000 Out-of-frame Intra-chr q36.3 q35 Tumor suppressor gene Seq+ 84889 ChimerSeq TCGA FAWG TCGA_RNA-Seq VMP1-C17orf64 VMP1 chr17 59773885 + C17orf64 chr17 60425783 + Exonic hg38 BRCA TCGA-AR-A24R-01A 30 248 In-Frame Intra-chr q23.1 q23.2 Seq+ 84890 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSH3-CABP2 SSH3 chr11 67309543 + CABP2 chr11 67524439 - Exonic hg38 BRCA TCGA-AR-A24R-01A 36 67 CDS-5'UTR Intra-chr q13.2 q13.2 84891 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-KDM2A SHANK2 chr11 71056481 - KDM2A chr11 67180079 + Exonic hg38 BRCA TCGA-AR-A24R-01A 24 42 In-Frame Intra-chr q13.4 q13.2 Transcription factor 84892 ChimerSeq TCGA FAWG TCGA_RNA-Seq AURKA-PCK1 AURKA chr20 56388156 - PCK1 chr20 57561372 + Exonic hg38 BRCA TCGA-AR-A24R-01A 9 26 CDS-5'UTR Intra-chr q13.2 Oncogene q13.31 Seq+ 84893 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXK2-ARFGAP1 FOXK2 chr17 82603675 + ARFGAP1 chr20 63281291 + Exonic hg38 BRCA TCGA-AR-A24R-01A 3 25 3'UTR-CDS Inter-chr q25.3 Transcription factor q13.33 Seq+ 84894 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDS5B-UBR2 PDS5B chr13 32586593 + UBR2 chr6 42691032 + Exonic hg38 BRCA TCGA-AR-A24R-01A 2 0 5'UTR-CDS Inter-chr q13.1 Tumor suppressor gene p21.1 Seq+ 84895 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT7-SAP30 GALNT7 chr4 173168961 + SAP30 chr4 173373390 + Exonic hg38 BRCA TCGA-AR-A24R-01A 1 2 In-Frame Intra-chr q34.1 q34.1 Seq+ 84896 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP1-SGIP1 USP1 chr1 62448666 + SGIP1 chr1 66625847 + Exonic hg38 BRCA TCGA-AR-A24S-01A 23 46 Out-of-frame Intra-chr p31.3 p31.3 Seq+ 84897 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF431-WIZ ZNF431 chr19 21143643 + WIZ chr19 15430089 - Exonic hg38 BRCA TCGA-AR-A24S-01A 7 37 Out-of-frame Intra-chr p12 Transcription factor p13.12 Transcription factor Seq+ 84898 ChimerSeq TCGA FAWG TCGA_RNA-Seq IPO7-OR7E14P IPO7 chr11 9384847 + OR7E14P chr11 17052032 + Exonic hg38 BRCA TCGA-AR-A24S-01A 7 6 CDS-5'UTR Intra-chr p15.4 p15.1 Seq+ 84899 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCA4-RASAL3 SMARCA4 chr19 11013112 + RASAL3 chr19 15461296 - Exonic hg38 BRCA TCGA-AR-A24S-01A 3 6 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.12 Seq+ 84900 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNA1G-PRAC2 CACNA1G chr17 50578564 + PRAC2 chr17 48724328 + Exonic hg38 BRCA TCGA-AR-A24U-01A 1 59 Out-of-frame Intra-chr q21.33 q21.32 84901 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNA1G-MED24 CACNA1G chr17 50578564 + MED24 chr17 40026331 - Exonic hg38 BRCA TCGA-AR-A24U-01A 4 18 In-Frame Intra-chr q21.33 q21.1 Seq+ 84902 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKAP1-IKZF3 SKAP1 chr17 48345905 - IKZF3 chr17 39766493 - Exonic hg38 BRCA TCGA-AR-A24U-01A 2 26 In-Frame Intra-chr q21.32 q21.1 Tumor suppressor gene Transcription factor Seq+ 84903 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERAP2-FAM81B ERAP2 chr5 96876527 + FAM81B chr5 95436800 + Exonic hg38 BRCA TCGA-AR-A24U-01A 4 2 5'UTR-CDS Intra-chr q15 q15 Seq+ 84904 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAST-MCTP1 CAST chr5 96737947 + MCTP1 chr5 94714886 - Exonic hg38 BRCA TCGA-AR-A24U-01A 2 8 In-Frame Intra-chr q15 q15 Seq+ 84905 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK12-IKZF3 CDK12 chr17 39463117 + IKZF3 chr17 39832151 - Exonic hg38 BRCA TCGA-AR-A24U-01A 2 3 Out-of-frame Intra-chr q12 Oncogene q21.1 Tumor suppressor gene Transcription factor Seq+ 84906 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEX2-TOB1 TEX2 chr17 64263168 - TOB1 chr17 50864163 - Exonic hg38 BRCA TCGA-AR-A24U-01A 1 4 5'UTR-5'UTR Intra-chr q23.3 q21.33 Seq+ 84907 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARSG-STAT5B ARSG chr17 68401450 + STAT5B chr17 42202808 - Exonic hg38 BRCA TCGA-AR-A24U-01A 1 2 In-Frame Intra-chr q24.2 q21.2 Transcription factor 84908 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEF1DP3-TEX26 EEF1DP3 chr13 31946181 + TEX26 chr13 30966222 + Exonic hg38 BRCA TCGA-AR-A24V-01A 14 123 5'UTR-CDS Intra-chr q13.1 q12.3 Seq+ 84909 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-C11orf24 PPFIA1 chr11 70272436 + C11orf24 chr11 68262918 - Exonic hg38 BRCA TCGA-AR-A24V-01A 16 65 Out-of-frame Intra-chr q13.3 q13.2 Seq+ 84910 ChimerSeq TCGA FAWG TCGA_RNA-Seq FSTL4-SLIT3 FSTL4 chr5 133201933 - SLIT3 chr5 168687116 - Exonic hg38 BRCA TCGA-AR-A24V-01A 2 11 In-Frame Intra-chr q31.1 q35.1 Seq+ 84911 ChimerSeq TCGA FAWG TCGA_RNA-Seq HPRT1-CTPS2 HPRT1 chrX 134475364 + CTPS2 chrX 16639243 - Exonic hg38 BRCA TCGA-AR-A24W-01A 252 645 In-Frame Intra-chr q26.2 p22.2 Seq+ 84912 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDS5B-UBR2 PDS5B chr13 32586593 + UBR2 chr6 42691032 + Exonic hg38 BRCA TCGA-AR-A24X-01A 2 3 5'UTR-CDS Inter-chr q13.1 Tumor suppressor gene p21.1 Seq+ 84913 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOOK1-RAB6A HOOK1 chr1 59815180 + RAB6A chr11 73679720 - Exonic hg38 BRCA TCGA-AR-A24Z-01A 23 36 In-Frame Inter-chr p32.1 q13.4 Seq+ 84914 ChimerSeq TCGA FAWG TCGA_RNA-Seq GABPB2-OR10J1 GABPB2 chr1 151098002 + OR10J1 chr1 159439776 + Exonic hg38 BRCA TCGA-AR-A24Z-01A 16 38 CDS-5'UTR Intra-chr q21.3 q23.2 Seq+ 84915 ChimerSeq TCGA FAWG TCGA_RNA-Seq SORBS2-AIF1 SORBS2 chr4 185684754 - AIF1 chr6 31616344 + Exonic hg38 BRCA TCGA-AR-A24Z-01A 16 31 CDS-3'UTR Inter-chr q35.1 Tumor suppressor gene Seq+ 84916 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMC1-SUSD4 LAMC1 chr1 183136450 + SUSD4 chr1 223281083 - Exonic hg38 BRCA TCGA-AR-A24Z-01A 13 19 Out-of-frame Intra-chr q25.3 q41 Seq+ 84917 ChimerSeq TCGA FAWG TCGA_RNA-Seq PACSIN2-ZNF823 PACSIN2 chr22 42912021 - ZNF823 chr19 11725327 - Exonic hg38 BRCA TCGA-AR-A24Z-01A 7 22 In-Frame Inter-chr q13.2 p13.2 Transcription factor Seq+ 84918 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSTYK-NAV1 DSTYK chr1 205211271 - NAV1 chr1 201780421 + Exonic hg38 BRCA TCGA-AR-A24Z-01A 2 29 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 84919 ChimerSeq TCGA FAWG TCGA_RNA-Seq CENPF-SUSD4 CENPF chr1 214603321 + SUSD4 chr1 223268675 - Exonic hg38 BRCA TCGA-AR-A24Z-01A 1 32 5'UTR-CDS Intra-chr q41 q41 Seq+ 84920 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARS2-SMAP1 RARS2 chr6 87589922 - SMAP1 chr6 70798657 + Exonic hg38 BRCA TCGA-AR-A24Z-01A 4 9 In-Frame Intra-chr q15 q13 Seq+ 84921 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK19-ZFAND3 CDK19 chr6 110815009 - ZFAND3 chr6 38152235 + Exonic hg38 BRCA TCGA-AR-A24Z-01A 2 16 Out-of-frame Intra-chr q21 p21.2 Seq+ 84922 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXJ3-ZFYVE9 FOXJ3 chr1 42265115 - ZFYVE9 chr1 52216369 + Exonic hg38 BRCA TCGA-AR-A24Z-01A 2 12 CDS-5'UTR Intra-chr p34.2 Transcription factor p32.3 Seq+ 84923 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEX3-PHACTR2 PEX3 chr6 143468165 + PHACTR2 chr6 143765261 + Exonic hg38 BRCA TCGA-AR-A24Z-01A 1 16 In-Frame Intra-chr q24.2 q24.2 84924 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE4B-MOB3C PDE4B chr1 66266087 + MOB3C chr1 46613371 - Exonic hg38 BRCA TCGA-AR-A24Z-01A 3 6 In-Frame Intra-chr p31.3 p33 84925 ChimerSeq TCGA FAWG TCGA_RNA-Seq CENPF-LAMC1 CENPF chr1 214603321 + LAMC1 chr1 183136386 + Exonic hg38 BRCA TCGA-AR-A24Z-01A 2 9 5'UTR-CDS Intra-chr q41 q25.3 84926 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBL-CLNS1A CBL chr11 119278713 + CLNS1A chr11 77530014 - Exonic hg38 BRCA TCGA-AR-A24Z-01A 2 7 CDS-3'UTR Intra-chr q23.3 Oncogene Tumor suppressor gene q14.1 84927 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-HMGN3 SHANK2 chr11 70659828 - HMGN3 chr6 79215022 - Exonic hg38 BRCA TCGA-AR-A24Z-01A 2 6 In-Frame Inter-chr q13.4 q14.1 Transcription factor 84928 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXNA2-DUSP10 PLXNA2 chr1 208210280 - DUSP10 chr1 221706466 - Exonic hg38 BRCA TCGA-AR-A24Z-01A 2 5 Out-of-frame Intra-chr q32.2 q41 Seq+ 84929 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC1-DAAM2 LRRC1 chr6 53842227 + DAAM2 chr6 39856247 + Exonic hg38 BRCA TCGA-AR-A24Z-01A 2 4 CDS-5'UTR Intra-chr p12.1 p21.2 Seq+ 84930 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM168A-PTCRA FAM168A chr11 73597923 - PTCRA chr6 42923145 + Exonic hg38 BRCA TCGA-AR-A24Z-01A 1 6 5'UTR-CDS Inter-chr q13.4 p21.1 Seq+ 84931 ChimerSeq TCGA FAWG TCGA_RNA-Seq ORC3-RIMS1 ORC3 chr6 87612248 + RIMS1 chr6 72390598 + Exonic hg38 BRCA TCGA-AR-A24Z-01A 2 2 Out-of-frame Intra-chr q15 q13 84932 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNPO2-DAB1 TNPO2 chr19 12723249 - DAB1 chr1 57884162 - Exonic hg38 BRCA TCGA-AR-A24Z-01A 1 6 5'UTR-5'UTR Inter-chr p13.13 p32.1 84933 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEA1-LRRC1 MEA1 chr6 43012926 - LRRC1 chr6 53896498 + Exonic hg38 BRCA TCGA-AR-A24Z-01A 1 5 Out-of-frame Intra-chr p21.1 p12.1 84934 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC44A5-PTGFR SLC44A5 chr1 75211468 - PTGFR chr1 78536406 + Exonic hg38 BRCA TCGA-AR-A24Z-01A 1 5 Out-of-frame Intra-chr p31.1 p31.1 84935 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARCN1-MANEA ARCN1 chr11 118572550 + MANEA chr6 95586402 + Exonic hg38 BRCA TCGA-AR-A24Z-01A 1 4 CDS-5'UTR Inter-chr q23.3 q16.1 84936 ChimerSeq TCGA FAWG TCGA_RNA-Seq IQGAP2-ACOT12 IQGAP2 chr5 76570657 + ACOT12 chr5 81330940 - Exonic hg38 BRCA TCGA-AR-A24Z-01A 1 2 Out-of-frame Intra-chr q13.3 Tumor suppressor gene q14.1 Seq+ 84937 ChimerSeq TCGA FAWG TCGA_RNA-Seq FUT10-GAB2 FUT10 chr8 33453216 - GAB2 chr11 78250400 - Exonic hg38 BRCA TCGA-AR-A250-01A 13 72 In-Frame Inter-chr p12 q14.1 Seq+ 84938 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDK2-CDK12 PDK2 chr17 50105442 + CDK12 chr17 39470879 + Exonic hg38 BRCA TCGA-AR-A250-01A 22 35 In-Frame Intra-chr q21.33 q12 Oncogene Seq+ 84939 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF2-NGFR SMURF2 chr17 64661829 - NGFR chr17 49502063 + Exonic hg38 BRCA TCGA-AR-A250-01A 15 17 Out-of-frame Intra-chr q24.1 q21.33 Tumor suppressor gene Seq+ 84940 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP95-RBM11 CEP95 chr17 64507116 + RBM11 chr21 14221097 + Exonic hg38 BRCA TCGA-AR-A250-01A 8 34 In-Frame Inter-chr q23.3 q11.2 Seq+ 84941 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF2-IKZF3 SMURF2 chr17 64661829 - IKZF3 chr17 39792933 - Exonic hg38 BRCA TCGA-AR-A250-01A 14 10 In-Frame Intra-chr q24.1 q21.1 Tumor suppressor gene Transcription factor Seq+ 84942 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBL3-PAN3 UBL3 chr13 29849512 - PAN3 chr13 28174272 + Exonic hg38 BRCA TCGA-AR-A250-01A 11 9 Out-of-frame Intra-chr q12.3 q12.2 Seq+ 84943 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNC1-MBTD1 PITPNC1 chr17 67578257 + MBTD1 chr17 51225209 - Exonic hg38 BRCA TCGA-AR-A250-01A 7 12 CDS-5'UTR Intra-chr q24.2 q21.33 Seq+ 84944 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX5-ADAM18 DDX5 chr17 64502010 - ADAM18 chr8 39638465 + Exonic hg38 BRCA TCGA-AR-A250-01A 2 28 CDS-3'UTR Inter-chr q23.3 Seq+ 84945 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-KAT7 BCAS3 chr17 61084564 + KAT7 chr17 49815803 + Exonic hg38 BRCA TCGA-AR-A250-01A 3 12 Out-of-frame Intra-chr q23.2 q21.33 Transcription factor Seq+ 84946 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB11FIP4-RAD51C RAB11FIP4 chr17 31488272 + RAD51C chr17 58694931 + Exonic hg38 BRCA TCGA-AR-A250-01A 5 4 Out-of-frame Intra-chr q11.2 q22 Tumor suppressor gene 84947 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL1A1-AEBP1 COL1A1 chr17 50196484 - AEBP1 chr7 44112142 + Exonic hg38 BRCA TCGA-AR-A250-01A 1 16 CDS-3'UTR Inter-chr q21.33 Oncogene p13 Transcription factor 84948 ChimerSeq TCGA FAWG TCGA_RNA-Seq IKZF3-BCAS3 IKZF3 chr17 39777651 - BCAS3 chr17 60868576 + Exonic hg38 BRCA TCGA-AR-A250-01A 1 15 Out-of-frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q23.2 Seq+ 84949 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUPT6H-TJP1 SUPT6H chr17 28686789 + TJP1 chr15 29956364 - Exonic hg38 BRCA TCGA-AR-A250-01A 2 7 CDS-5'UTR Inter-chr q11.2 84950 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFT88-WASF3 IFT88 chr13 20583019 + WASF3 chr13 26642261 + Exonic hg38 BRCA TCGA-AR-A250-01A 1 4 5'UTR-5'UTR Intra-chr q12.11 Tumor suppressor gene q12.13 Seq+ 84951 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAG1-ISY1 STAG1 chr3 136752195 - ISY1 chr3 129140485 - Exonic hg38 BRCA TCGA-AR-A251-01A 110 343 5'UTR-CDS Intra-chr q22.3 q21.3 Seq+ 84952 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K4-FNDC1 MAP3K4 chr6 161049979 + FNDC1 chr6 159197431 + Exonic hg38 BRCA TCGA-AR-A251-01A 26 50 Out-of-frame Intra-chr q26 STE:STE11 Tumor suppressor gene q25.3 Seq+ 84953 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPSAP1-ST6GALNAC2 PRPSAP1 chr17 76348529 - ST6GALNAC2 chr17 76578816 - Exonic hg38 BRCA TCGA-AR-A251-01A 11 31 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 84954 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELK3-AMDHD1 ELK3 chr12 96223773 + AMDHD1 chr12 95952717 + Exonic hg38 BRCA TCGA-AR-A251-01A 13 22 Out-of-frame Intra-chr q23.1 Transcription factor q23.1 Seq+ 84955 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNBP1L-NCR2 FNBP1L chr1 93448305 + NCR2 chr6 41335831 + Exonic hg38 BRCA TCGA-AR-A251-01A 8 42 CDS-5'UTR Inter-chr p22.1 p21.1 Seq+ 84956 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAV2-PACSIN3 NAV2 chr11 20083179 + PACSIN3 chr11 47183069 - Exonic hg38 BRCA TCGA-AR-A251-01A 7 20 CDS-5'UTR Intra-chr p15.1 p11.2 Seq+ 84957 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF251-FAHD2B ZNF251 chr8 144753683 - FAHD2B chr2 97091712 - Exonic hg38 BRCA TCGA-AR-A251-01A 5 14 5'UTR-5'UTR Inter-chr Transcription factor q11.2 Seq+ 84958 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRUNE2-GNAQ PRUNE2 chr9 76823632 - GNAQ chr9 77797648 - Exonic hg38 BRCA TCGA-AR-A251-01A 4 9 Out-of-frame Intra-chr q21.2 q21.2 Oncogene Seq+ 84959 ChimerSeq TCGA FAWG TCGA_RNA-Seq LONP1-SAFB2 LONP1 chr19 5705772 - SAFB2 chr19 5600260 - Exonic hg38 BRCA TCGA-AR-A251-01A 2 11 In-Frame Intra-chr p13.3 p13.3 Tumor suppressor gene Transcription factor Seq+ 84960 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF644-STARD3NL ZNF644 chr1 90982310 - STARD3NL chr7 38207447 + Exonic hg38 BRCA TCGA-AR-A251-01A 1 5 CDS-5'UTR Inter-chr p22.2 Transcription factor p14.1 84961 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNM3-SLC38A9 PITPNM3 chr17 6525356 - SLC38A9 chr5 55697212 - Exonic hg38 BRCA TCGA-AR-A251-01A 1 3 CDS-5'UTR Inter-chr p13.1 q11.2 84962 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-CLTC NF1 chr17 31236021 + CLTC chr17 59644276 + Exonic hg38 BRCA TCGA-AR-A252-01A 3 30 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q23.1 Seq+ 84963 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13-TANC2 MED13 chr17 61965006 - TANC2 chr17 63073943 + Exonic hg38 BRCA TCGA-AR-A252-01A 5 6 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 84964 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTFDC1-PCNT RTFDC1 chr20 56474771 + PCNT chr21 46398014 + Exonic hg38 BRCA TCGA-AR-A252-01A 3 8 Out-of-frame Inter-chr q13.31 q22.3 Seq+ 84965 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-SLC29A3 ERBB2 chr17 39727003 + SLC29A3 chr10 71361954 + Exonic hg38 BRCA TCGA-AR-A254-01A 320 1029 Out-of-frame Inter-chr q12 Oncogene q22.1 Seq+ 84966 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARA-MSL1 RARA chr17 40331396 + MSL1 chr17 40126183 + Exonic hg38 BRCA TCGA-AR-A254-01A 37 243 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q21.1 Seq+ 84967 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-SOCS7 FBXL20 chr17 39402173 - SOCS7 chr17 38395309 + Exonic hg38 BRCA TCGA-AR-A254-01A 53 135 CDS-3'UTR Intra-chr q12 q12 Seq+ 84968 ChimerSeq TCGA FAWG TCGA_RNA-Seq OPRL1-PRPF6 OPRL1 chr20 64080352 + PRPF6 chr20 64010200 + Exonic hg38 BRCA TCGA-AR-A254-01A 30 110 3'UTR-CDS Intra-chr q13.33 Seq+ 84969 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2B-BPI GTF2B chr1 88891483 - BPI chr20 38334430 + Exonic hg38 BRCA TCGA-AR-A254-01A 2 209 Out-of-frame Inter-chr p22.2 Transcription factor q11.23 Seq+ 84970 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM217B-PRPF6 FAM217B chr20 59938112 + PRPF6 chr20 64025939 + Exonic hg38 BRCA TCGA-AR-A254-01A 14 72 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 84971 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-NOTCH2 FBXL20 chr17 39402173 - NOTCH2 chr1 119922778 - Exonic hg38 BRCA TCGA-AR-A254-01A 5 10 Out-of-frame Inter-chr q12 p12 Oncogene Tumor suppressor gene Seq+ 84972 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM149B1-USP6NL FAM149B1 chr10 73208786 + USP6NL chr10 11527567 - Exonic hg38 BRCA TCGA-AR-A254-01A 5 1 Out-of-frame Intra-chr q22.2 p14 Seq+ 84973 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC6-MSL1 CDC6 chr17 40294056 + MSL1 chr17 40126183 + Exonic hg38 BRCA TCGA-AR-A254-01A 3 7 3'UTR-CDS Intra-chr q21.2 q21.1 Seq+ 84974 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF2P1-ASIC2 SMURF2P1 chr17 30610942 + ASIC2 chr17 33112067 - Exonic hg38 BRCA TCGA-AR-A255-01A 11 29 Out-of-frame Intra-chr q11.2 q12 84975 ChimerSeq TCGA FAWG TCGA_RNA-Seq RABGAP1L-MGST3 RABGAP1L chr1 174159657 + MGST3 chr1 165649841 + Exonic hg38 BRCA TCGA-AR-A255-01A 6 21 5'UTR-5'UTR Intra-chr q25.1 q24.1 Seq+ 84976 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHM-ABCB7 CHM chrX 86027491 - ABCB7 chrX 75114831 - Exonic hg38 BRCA TCGA-AR-A255-01A 1 11 Out-of-frame Intra-chr q21.2 q13.3 Seq+ 84977 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDB1-TMEM258 DDB1 chr11 61308983 - TMEM258 chr11 61789235 - Exonic hg38 BRCA TCGA-AR-A256-01A 112 158 CDS-3'UTR Intra-chr q12.2 q12.2 Seq+ 84978 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST14-ST7 ST14 chr11 130160060 + ST7 chr7 117099762 + Exonic hg38 BRCA TCGA-AR-A256-01A 26 72 Out-of-frame Inter-chr q24.3 q31.2 Tumor suppressor gene Seq+ 84979 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHMP4B-CBFA2T2 CHMP4B chr20 33811658 + CBFA2T2 chr20 33644347 + Exonic hg38 BRCA TCGA-AR-A256-01A 31 42 Out-of-frame Intra-chr q11.22 q11.21 Seq+ 84980 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNY-DENND1A CCNY chr10 35337207 + DENND1A chr9 123757822 - Exonic hg38 BRCA TCGA-AR-A256-01A 9 58 Out-of-frame Inter-chr p11.21 q33.3 Seq+ 84981 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC4-SLC25A13 EXOC4 chr7 133375002 + SLC25A13 chr7 96146696 - Exonic hg38 BRCA TCGA-AR-A256-01A 10 54 In-Frame Intra-chr q33 q21.3 Seq+ 84982 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2orf42-TGFA C2orf42 chr2 70248405 - TGFA chr2 70465736 - Exonic hg38 BRCA TCGA-AR-A256-01A 7 59 5'UTR-CDS Intra-chr p13.3 p13.3 84983 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIA1-TGFA TIA1 chr2 70248405 - TGFA chr2 70465736 - Exonic hg38 BRCA TCGA-AR-A256-01A 7 59 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 84984 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMK2G-AGAP5 CAMK2G chr10 73872989 - AGAP5 chr10 73682794 - Exonic hg38 BRCA TCGA-AR-A256-01A 10 17 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 84985 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCA4-ICAM1 SMARCA4 chr19 10961174 + ICAM1 chr19 10274765 + Exonic hg38 BRCA TCGA-AR-A256-01A 7 23 5'UTR-CDS Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 84986 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWP2-TSEN54 WWP2 chr16 69787080 + TSEN54 chr17 75521409 + Exonic hg38 BRCA TCGA-AR-A256-01A 5 31 Out-of-frame Inter-chr q22.1 q25.1 Seq+ 84987 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSC2-TMEM204 TSC2 chr16 2048753 + TMEM204 chr16 1554782 + Exonic hg38 BRCA TCGA-AR-A256-01A 4 22 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 84988 ChimerSeq TCGA FAWG TCGA_RNA-Seq S100A4-S100A3 S100A4 chr1 153544654 - S100A3 chr1 153548490 - Exonic hg38 BRCA TCGA-AR-A256-01A 4 14 CDS-5'UTR Intra-chr q21.3 q21.3 84989 ChimerSeq TCGA FAWG TCGA_RNA-Seq GIGYF2-CHRND GIGYF2 chr2 232749082 + CHRND chr2 232533931 + Exonic hg38 BRCA TCGA-AR-A256-01A 3 16 In-Frame Intra-chr q37.1 q37.1 Seq+ 84990 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGGT1B-KIAA0825 PGGT1B chr5 115253133 - KIAA0825 chr5 94154124 - Exonic hg38 BRCA TCGA-AR-A256-01A 2 15 Out-of-frame Intra-chr q22.3 q15 Seq+ 84991 ChimerSeq TCGA FAWG TCGA_RNA-Seq PATJ-HSD52 PATJ chr1 61927829 + HSD52 chr1 59133330 - Exonic hg38 BRCA TCGA-AR-A256-01A 3 9 CDS-3'UTR Intra-chr p31.3 p32.1 84992 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC14-SYNJ2 ZDHHC14 chr6 157653627 + SYNJ2 chr6 158088660 + Exonic hg38 BRCA TCGA-AR-A256-01A 3 5 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 84993 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPOPL-SSFA2 SPOPL chr2 138502119 + SSFA2 chr2 181892032 + Exonic hg38 BRCA TCGA-AR-A256-01A 3 3 Out-of-frame Intra-chr q22.1 q31.3 Seq+ 84994 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK17B-HECW2 STK17B chr2 196143560 - HECW2 chr2 196343764 - Exonic hg38 BRCA TCGA-AR-A256-01A 3 3 In-Frame Intra-chr q32.3 q32.3 Seq+ 84995 ChimerSeq TCGA FAWG TCGA_RNA-Seq WRAP53-SLC44A2 WRAP53 chr17 7689322 + SLC44A2 chr19 10636323 + Exonic hg38 BRCA TCGA-AR-A256-01A 1 11 Out-of-frame Inter-chr p13.1 p13.2 84996 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS15L1-RABGAP1 EPS15L1 chr19 16361779 - RABGAP1 chr9 123015543 + Exonic hg38 BRCA TCGA-AR-A256-01A 2 6 Out-of-frame Inter-chr p13.11 q33.2 Seq+ 84997 ChimerSeq TCGA FAWG TCGA_RNA-Seq ILF3-TP53 ILF3 chr19 10654487 + TP53 chr17 7676622 - Exonic hg38 BRCA TCGA-AR-A256-01A 2 4 5'UTR-5'UTR Inter-chr p13.2 p13.1 Oncogene Tumor suppressor gene Transcription factor Seq+ 84998 ChimerSeq TCGA FAWG TCGA_RNA-Seq CA3-MYBL1 CA3 chr8 85444126 + MYBL1 chr8 66566992 - Exonic hg38 BRCA TCGA-AR-A256-01A 2 3 In-Frame Intra-chr q21.2 q13.1 Transcription factor Seq+ 84999 ChimerSeq TCGA FAWG TCGA_RNA-Seq HK1-SUPV3L1 HK1 chr10 69343989 + SUPV3L1 chr10 69207793 + Exonic hg38 BRCA TCGA-AR-A256-01A 2 3 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 85000 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDPCP-VPS54 WDPCP chr2 63492856 - VPS54 chr2 63949163 - Exonic hg38 BRCA TCGA-AR-A256-01A 1 6 Out-of-frame Intra-chr p15 p14 Seq+ 85001 ChimerSeq TCGA FAWG TCGA_RNA-Seq C16orf62-TMC5 C16orf62 chr16 19591874 + TMC5 chr16 19497121 + Exonic hg38 BRCA TCGA-AR-A256-01A 1 4 Out-of-frame Intra-chr p12.3 p12.3 Seq+ 85002 ChimerSeq TCGA FAWG TCGA_RNA-Seq VCL-PLAU VCL chr10 73998375 + PLAU chr10 73914776 + Exonic hg38 BRCA TCGA-AR-A256-01A 1 3 Out-of-frame Intra-chr q22.2 q22.2 85003 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNGTT-RRAGD RNGTT chr6 88678353 - RRAGD chr6 89387590 - Exonic hg38 BRCA TCGA-AR-A256-01A 1 2 Out-of-frame Intra-chr q15 q15 85004 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITSN2-DNAJC27 ITSN2 chr2 24212650 - DNAJC27 chr2 24967293 - Exonic hg38 BRCA TCGA-AR-A256-01A 1 1 In-Frame Intra-chr p23.3 p23.3 85005 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC75A-PEMT LRRC75A chr17 16491745 - PEMT chr17 17577027 - Exonic hg38 BRCA TCGA-AR-A2LJ-01A 72 139 In-Frame Intra-chr p11.2 p11.2 85006 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOR1-RSF1 NCOR1 chr17 16215362 - RSF1 chr11 77685159 - Exonic hg38 BRCA TCGA-AR-A2LJ-01A 2 41 5'UTR-CDS Inter-chr p11.2 Oncogene q14.1 Seq+ 85007 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOR1-ACER3 NCOR1 chr17 16091863 - ACER3 chr11 76868120 + Exonic hg38 BRCA TCGA-AR-A2LJ-01A 2 39 CDS-5'UTR Inter-chr p11.2 Oncogene q13.5 Seq+ 85008 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-KIRREL3 UVRAG chr11 76016980 + KIRREL3 chr11 126562912 - Exonic hg38 BRCA TCGA-AR-A2LJ-01A 2 19 Out-of-frame Intra-chr q13.5 Tumor suppressor gene q24.2 Seq+ 85009 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLLT6-KIRREL3 MLLT6 chr17 38709575 + KIRREL3 chr11 126473466 - Exonic hg38 BRCA TCGA-AR-A2LJ-01A 3 9 3'UTR-CDS Inter-chr q12 q24.2 Seq+ 85010 ChimerSeq TCGA FAWG TCGA_RNA-Seq IKBKB-FADD IKBKB chr8 42309025 + FADD chr11 70206133 + Exonic hg38 BRCA TCGA-AR-A2LK-01A 11 56 Out-of-frame Inter-chr p11.21 Oncogene q13.3 Tumor suppressor gene Seq+ 85011 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP2-ELF3 SRGAP2 chr1 206303473 + ELF3 chr1 202012640 + Exonic hg38 BRCA TCGA-AR-A2LK-01A 1 8 Out-of-frame Intra-chr q32.1 Tumor suppressor gene q32.1 Transcription factor 85012 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF37A-PIP5K1B ZNF37A chr10 38096632 + PIP5K1B chr9 68818461 + Exonic hg38 BRCA TCGA-AR-A2LL-01A 45 382 CDS-5'UTR Inter-chr p11.1 Transcription factor q21.11 Seq+ 85013 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A24-DHRS12 SLC25A24 chr1 108181941 - DHRS12 chr13 51799667 - Exonic hg38 BRCA TCGA-AR-A2LL-01A 14 34 5'UTR-5'UTR Inter-chr q14.3 Seq+ 85014 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMIZ1-TACC1P1 ZMIZ1 chr10 79216274 + TACC1P1 chr10 37523011 + Exonic hg38 BRCA TCGA-AR-A2LL-01A 11 15 Out-of-frame Intra-chr q22.3 p11.21 Seq+ 85015 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK1-APBA1 DOCK1 chr10 127257429 + APBA1 chr9 69517279 - Exonic hg38 BRCA TCGA-AR-A2LL-01A 2 8 CDS-3'UTR Inter-chr q26.2 q21.12 Seq+ 85016 ChimerSeq TCGA FAWG TCGA_RNA-Seq SORL1-DDX6 SORL1 chr11 121532552 + DDX6 chr11 118786518 - Exonic hg38 BRCA TCGA-AR-A2LL-01A 1 4 CDS-5'UTR Intra-chr q24.1 q23.3 Seq+ 85017 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCY3-TP53I3 ADCY3 chr2 24918313 - TP53I3 chr2 24084860 - Exonic hg38 BRCA TCGA-AR-A2LL-01A 1 3 CDS-5'UTR Intra-chr p23.3 p23.3 85018 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAR-LYPD8 ADAR chr1 154627954 - LYPD8 chr1 248751130 - Exonic hg38 BRCA TCGA-AR-A2LL-01A 1 2 5'UTR-5'UTR Intra-chr q21.3 q44 85019 ChimerSeq TCGA FAWG TCGA_RNA-Seq RECQL-PEMT RECQL chr12 21499555 - PEMT chr17 17577027 - Exonic hg38 BRCA TCGA-AR-A2LM-01A 6 3 Out-of-frame Inter-chr p12.1 p11.2 Seq+ 85020 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST8SIA1-LMNTD1 ST8SIA1 chr12 22249006 - LMNTD1 chr12 25526955 - Exonic hg38 BRCA TCGA-AR-A2LM-01A 2 4 In-Frame Intra-chr p12.1 p12.1 Tumor suppressor gene 85021 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSRC2-LIN7A RSRC2 chr12 122526848 - LIN7A chr12 80797726 - Exonic hg38 BRCA TCGA-AR-A2LM-01A 1 2 3'UTR-3'UTR Intra-chr q24.31 q21.31 85022 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKS1B-CCER1 ANKS1B chr12 99655067 - CCER1 chr12 90905864 - Exonic hg38 BRCA TCGA-AR-A2LN-01A 8 39 CDS-3'UTR Intra-chr q23.1 q21.33 85023 ChimerSeq TCGA FAWG TCGA_RNA-Seq YAF2-SYT1 YAF2 chr12 42237599 - SYT1 chr12 78864998 + Exonic hg38 BRCA TCGA-AR-A2LN-01A 3 2 CDS-5'UTR Intra-chr q12 q21.2 Seq+ 85024 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLIC1-HIST1H2BC CLIC1 chr6 31733566 - HIST1H2BC chr6 26115135 - Exonic hg38 BRCA TCGA-AR-A2LR-01A 18 18 5'UTR-3'UTR Intra-chr p22.2 Seq+ 85025 ChimerSeq TCGA FAWG TCGA_RNA-Seq UAP1-BCL9 UAP1 chr1 162566348 + BCL9 chr1 147618816 + Exonic hg38 BRCA TCGA-AR-A2LR-01A 14 27 Out-of-frame Intra-chr q23.3 q21.2 Oncogene Seq+ 85026 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMYM4-UTP11 ZMYM4 chr1 35325405 + UTP11 chr1 38022699 + Exonic hg38 BRCA TCGA-AR-A2LR-01A 11 31 Out-of-frame Intra-chr p34.3 p34.3 85027 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP1-ZC2HC1A AGAP1 chr2 235494849 + ZC2HC1A chr8 78715221 + Exonic hg38 BRCA TCGA-AR-A2LR-01A 13 15 Out-of-frame Inter-chr q37.2 q21.13 Seq+ 85028 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNPDA2-GRID2 GNPDA2 chr4 44726474 - GRID2 chr4 93395607 + Exonic hg38 BRCA TCGA-AR-A2LR-01A 7 11 5'UTR-CDS Intra-chr p12 q22.1 Seq+ 85029 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIEF2-RAI1 MIEF2 chr17 18264764 + RAI1 chr17 17803756 + Exonic hg38 BRCA TCGA-AR-A2LR-01A 4 15 3'UTR-CDS Intra-chr p11.2 Seq+ 85030 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLCN3-UBE2D3 CLCN3 chr4 169636088 + UBE2D3 chr4 102809855 - Exonic hg38 BRCA TCGA-AR-A2LR-01A 3 15 Out-of-frame Intra-chr q33 q24 Seq+ 85031 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL16A1-ATF7IP COL16A1 chr1 31665172 - ATF7IP chr12 14423909 + Exonic hg38 BRCA TCGA-AR-A2LR-01A 3 8 Out-of-frame Inter-chr p35.2 p13.1 Seq+ 85032 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNY-AKAP10 CCNY chr10 35337207 + AKAP10 chr17 19968461 - Exonic hg38 BRCA TCGA-AR-A2LR-01A 3 6 In-Frame Inter-chr p11.21 p11.2 Seq+ 85033 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT2-PRKCQ GALNT2 chr1 230067406 + PRKCQ chr10 6464404 - Exonic hg38 BRCA TCGA-AR-A2LR-01A 3 6 In-Frame Inter-chr q42.13 p15.1 Seq+ 85034 ChimerSeq TCGA FAWG TCGA_RNA-Seq C16orf95-GABRA3 C16orf95 chr16 87302653 - GABRA3 chrX 152345702 - Exonic hg38 BRCA TCGA-AR-A2LR-01A 3 5 3'UTR-CDS Inter-chr q24.2 q28 Seq+ 85035 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP3-FGD5 SRGAP3 chr3 9248885 - FGD5 chr3 14818956 + Exonic hg38 BRCA TCGA-AR-A2LR-01A 2 7 CDS-5'UTR Intra-chr p25.3 Tumor suppressor gene p25.1 85036 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4K5-PYGL MAP4K5 chr14 50561040 - PYGL chr14 50937837 - Exonic hg38 BRCA TCGA-AR-A2LR-01A 1 10 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 85037 ChimerSeq TCGA FAWG TCGA_RNA-Seq RREB1-GPX6 RREB1 chr6 7108060 + GPX6 chr6 28510904 - Exonic hg38 BRCA TCGA-AR-A2LR-01A 1 9 5'UTR-CDS Intra-chr p24.3 Transcription factor Seq+ 85038 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIEF2-ANKRD30A MIEF2 chr17 18263248 + ANKRD30A chr10 37152060 + Exonic hg38 BRCA TCGA-AR-A2LR-01A 2 4 3'UTR-CDS Inter-chr p11.21 Seq+ 85039 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASC11-CASC8 CASC11 chr8 127733825 - CASC8 chr8 127420963 - Exonic hg38 BRCA TCGA-AR-A2LR-01A 1 7 3'UTR-3'UTR Intra-chr q24.21 q24.21 85040 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK4-CLASRP MARK4 chr19 45299855 + CLASRP chr19 45052071 + Exonic hg38 BRCA TCGA-AR-A2LR-01A 1 3 Out-of-frame Intra-chr q13.32 CAMK:CAMKL Oncogene q13.32 85041 ChimerSeq TCGA FAWG TCGA_RNA-Seq PFDN2-COPA PFDN2 chr1 161102048 - COPA chr1 160290216 - Exonic hg38 BRCA TCGA-AR-A2LR-01A 1 2 In-Frame Intra-chr q23.3 q23.2 85042 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPS3-TEKT3 COPS3 chr17 17260301 - TEKT3 chr17 15314230 - Exonic hg38 BRCA TCGA-AR-A5QN-01A 2 20 Out-of-frame Intra-chr p11.2 p12 Seq+ 85043 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADPRHL2-SHPK ADPRHL2 chr1 36089115 + SHPK chr17 3630346 - Exonic hg38 BRCA TCGA-AR-A5QP-01A 3 14 Out-of-frame Inter-chr p34.3 p13.2 Seq+ 85044 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF703-EIF4EBP1 ZNF703 chr8 37696222 + EIF4EBP1 chr8 38057081 + Exonic hg38 BRCA TCGA-AR-A5QQ-01A 55 301 Out-of-frame Intra-chr p11.23 Transcription factor p11.23 Seq+ 85045 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDDC2-FAM47E HDDC2 chr6 125292841 - FAM47E chr4 76263704 + Exonic hg38 BRCA TCGA-AR-A5QQ-01A 6 41 In-Frame Inter-chr q22.31 q21.1 Seq+ 85046 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPIDR-RP1 SPIDR chr8 47294030 + RP1 chr8 54754803 + Exonic hg38 BRCA TCGA-AR-A5QQ-01A 1 8 CDS-3'UTR Intra-chr q11.21 q11.23 85047 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUT1-BSCL2 TUT1 chr11 62589031 - BSCL2 chr11 62694711 - Exonic hg38 BRCA TCGA-B6-A0I1-01A 65 353 In-Frame Intra-chr q12.3 q12.3 Seq+ 85048 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCARB1-DHX37 SCARB1 chr12 124863595 - DHX37 chr12 124977490 - Exonic hg38 BRCA TCGA-B6-A0I1-01A 9 32 In-Frame Intra-chr q24.31 q24.31 Seq+ 85049 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELF2-NR1I3 ELF2 chr4 139084133 - NR1I3 chr1 161238183 - Exonic hg38 BRCA TCGA-B6-A0I1-01A 7 20 CDS-5'UTR Inter-chr q31.1 Transcription factor q23.3 Transcription factor Seq+ 85050 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELF5-CAT ELF5 chr11 34493479 - CAT chr11 34464105 + Exonic hg38 BRCA TCGA-B6-A0I1-01A 6 18 In-Frame Intra-chr p13 Transcription factor p13 Tumor suppressor gene Seq+ 85051 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD8-MAST1 FRMD8 chr11 65397020 + MAST1 chr19 12858362 + Exonic hg38 BRCA TCGA-B6-A0I1-01A 3 22 Out-of-frame Inter-chr q13.1 p13.13 AGC:MAST Seq+ 85052 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIMM50-IFNL1 TIMM50 chr19 39483156 + IFNL1 chr19 39296805 + Exonic hg38 BRCA TCGA-B6-A0I1-01A 3 14 In-Frame Intra-chr q13.2 q13.2 Seq+ 85053 ChimerSeq TCGA FAWG TCGA_RNA-Seq C11orf80-KDM2A C11orf80 chr11 66816199 + KDM2A chr11 67248281 + Exonic hg38 BRCA TCGA-B6-A0I1-01A 2 16 Out-of-frame Intra-chr q13.2 q13.2 Transcription factor Seq+ 85054 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-NABP2 PVT1 chr8 127794734 + NABP2 chr12 56225373 + Exonic hg38 BRCA TCGA-B6-A0I1-01A 3 12 5'UTR-CDS Inter-chr q24.21 q13.3 85055 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-CS PVT1 chr8 127890998 + CS chr12 56276195 - Exonic hg38 BRCA TCGA-B6-A0I1-01A 3 7 5'UTR-CDS Inter-chr q24.21 q13.3 Seq+ 85056 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFFO2-UBR4 IFFO2 chr1 18955668 - UBR4 chr1 19084698 - Exonic hg38 BRCA TCGA-B6-A0I1-01A 3 3 In-Frame Intra-chr p36.13 p36.13 Seq+ 85057 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGST3-SLAMF7 MGST3 chr1 165631293 + SLAMF7 chr1 160748194 + Exonic hg38 BRCA TCGA-B6-A0I1-01A 2 7 5'UTR-CDS Intra-chr q24.1 q23.3 Seq+ 85058 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRG2-CCDC155 PRRG2 chr19 49583717 + CCDC155 chr19 49408967 + Exonic hg38 BRCA TCGA-B6-A0I1-01A 2 7 In-Frame Intra-chr q13.33 q13.33 Seq+ 85059 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP6V0A1-ATF6 ATP6V0A1 chr17 42461011 + ATF6 chr1 161863198 + Exonic hg38 BRCA TCGA-B6-A0I1-01A 1 10 Out-of-frame Inter-chr q21.2 q23.3 Transcription factor Seq+ 85060 ChimerSeq TCGA FAWG TCGA_RNA-Seq GMDS-METTL24 GMDS chr6 1930103 - METTL24 chr6 110322872 - Exonic hg38 BRCA TCGA-B6-A0I1-01A 2 5 In-Frame Intra-chr p25.3 q21 Seq+ 85061 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFCAB13-MYL4 EFCAB13 chr17 47414919 + MYL4 chr17 47209389 + Exonic hg38 BRCA TCGA-B6-A0I1-01A 1 5 CDS-5'UTR Intra-chr q21.32 q21.32 85062 ChimerSeq TCGA FAWG TCGA_RNA-Seq WRN-ADAM9 WRN chr8 31125000 + ADAM9 chr8 39013965 + Exonic hg38 BRCA TCGA-B6-A0I1-01A 1 5 CDS-3'UTR Intra-chr p12 Oncogene Seq+ 85063 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHMP4B-CBFA2T2 CHMP4B chr20 33811658 + CBFA2T2 chr20 33623115 + Exonic hg38 BRCA TCGA-B6-A0I1-01A 1 3 Out-of-frame Intra-chr q11.22 q11.21 Seq+ 85064 ChimerSeq TCGA FAWG TCGA_RNA-Seq XYLB-OXSR1 XYLB chr3 38348632 + OXSR1 chr3 38242743 + Exonic hg38 BRCA TCGA-B6-A0I1-01A 1 3 Out-of-frame Intra-chr p22.2 p22.2 85065 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL11-ST8SIA1 MRPL11 chr11 66437104 - ST8SIA1 chr12 22249098 - Exonic hg38 BRCA TCGA-B6-A0I2-01A 8 26 In-Frame Inter-chr q13.2 p12.1 Seq+ 85066 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF549-CTU1 ZNF549 chr19 57535270 + CTU1 chr19 51104590 - Exonic hg38 BRCA TCGA-B6-A0I2-01A 3 3 CDS-5'UTR Intra-chr q13.43 Transcription factor q13.41 Seq+ 85067 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R12B-FAM134A PPP1R12B chr1 202349142 + FAM134A chr2 219182013 + Exonic hg38 BRCA TCGA-B6-A0I2-01A 1 8 Out-of-frame Inter-chr q32.1 85068 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF219-HNRNPC ZNF219 chr14 21098312 - HNRNPC chr14 21234229 - Exonic hg38 BRCA TCGA-B6-A0I6-01A 40 11 5'UTR-5'UTR Intra-chr q11.2 Transcription factor q11.2 Seq+ 85069 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENG-AK1 ENG chr9 127843094 - AK1 chr9 127868512 - Exonic hg38 BRCA TCGA-B6-A0I6-01A 23 59 In-Frame Intra-chr q34.11 q34.11 Seq+ 85070 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKAL1-RBM24 CDKAL1 chr6 20955585 + RBM24 chr6 17291756 + Exonic hg38 BRCA TCGA-B6-A0I6-01A 8 41 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 85071 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R16A-ADCK5 PPP1R16A chr8 144490212 + ADCK5 chr8 144390671 + Exonic hg38 BRCA TCGA-B6-A0I6-01A 3 26 5'UTR-3'UTR Intra-chr q24.3 q24.3 Atypical:ABC1 Seq+ 85072 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUDT9-FAM13A NUDT9 chr4 87449253 + FAM13A chr4 88991150 - Exonic hg38 BRCA TCGA-B6-A0I6-01A 5 7 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 85073 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPZ1-HOXC4 COPZ1 chr12 54325181 + HOXC4 chr12 54054260 + Exonic hg38 BRCA TCGA-B6-A0I6-01A 4 2 In-Frame Intra-chr q13.13 q13.13 Transcription factor Seq+ 85074 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNY-ZNF496 CCNY chr10 35501535 + ZNF496 chr1 247310456 - Exonic hg38 BRCA TCGA-B6-A0I8-01A 2 23 In-Frame Inter-chr p11.21 q44 Transcription factor Seq+ 85075 ChimerSeq TCGA FAWG TCGA_RNA-Seq IPO11-CENPJ IPO11 chr5 62412929 + CENPJ chr13 24885386 - Exonic hg38 BRCA TCGA-B6-A0I8-01A 4 8 5'UTR-CDS Inter-chr q12.1 q12.13 Seq+ 85076 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAPK1-GRIN2D DAPK1 chr9 87681626 + GRIN2D chr19 48419585 + Exonic hg38 BRCA TCGA-B6-A0I8-01A 1 16 In-Frame Inter-chr q21.33 CAMK:DAPK Tumor suppressor gene q13.33 Seq+ 85077 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRV1-POLR3G ADGRV1 chr5 90643041 + POLR3G chr5 90501906 + Exonic hg38 BRCA TCGA-B6-A0I8-01A 2 5 Out-of-frame Intra-chr q14.3 q14.3 85078 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNRPG-PCYOX1 SNRPG chr2 70288068 - PCYOX1 chr2 70276734 + Exonic hg38 BRCA TCGA-B6-A0I8-01A 1 5 Out-of-frame Intra-chr p13.3 p13.3 85079 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHACTR3-SYCP2 PHACTR3 chr20 59847711 + SYCP2 chr20 59867775 - Exonic hg38 BRCA TCGA-B6-A0I8-01A 1000 1000 3'UTR-CDS Intra-chr q13.32 q13.33 85080 ChimerSeq TCGA FAWG TCGA_RNA-Seq ORMDL3-ZPBP2 ORMDL3 chr17 39924030 - ZPBP2 chr17 39870694 + Exonic hg38 BRCA TCGA-B6-A0I9-01A 62 261 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 85081 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX13-STAP2 SNX13 chr7 17940284 - STAP2 chr19 4334044 - Exonic hg38 BRCA TCGA-B6-A0I9-01A 58 186 In-Frame Inter-chr p21.1 p13.3 Seq+ 85082 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRADD-SLC12A1 TRADD chr16 67159838 - SLC12A1 chr15 48255811 + Exonic hg38 BRCA TCGA-B6-A0I9-01A 84 55 5'UTR-CDS Inter-chr q22.1 q21.1 Seq+ 85083 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASTN2-PNMT ASTN2 chr9 117291326 - PNMT chr17 39669629 + Exonic hg38 BRCA TCGA-B6-A0I9-01A 17 147 Out-of-frame Inter-chr q33.1 q12 Seq+ 85084 ChimerSeq TCGA FAWG TCGA_RNA-Seq NARS2-NDUFC2 NARS2 chr11 78559539 - NDUFC2 chr11 78073141 - Exonic hg38 BRCA TCGA-B6-A0I9-01A 16 55 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 85085 ChimerSeq TCGA FAWG TCGA_RNA-Seq FSD1L-ADAMTS13 FSD1L chr9 105448235 + ADAMTS13 chr9 133448599 + Exonic hg38 BRCA TCGA-B6-A0I9-01A 7 35 CDS-3'UTR Intra-chr q31.2 Seq+ 85086 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KA5-C14orf132 RPS6KA5 chr14 91060332 - C14orf132 chr14 96086511 + Exonic hg38 BRCA TCGA-B6-A0I9-01A 9 12 Out-of-frame Intra-chr q32.11 q32.2 Seq+ 85087 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDIAS-AS DDIAS chr11 82914851 + AS chr11 27584269 + Exonic hg38 BRCA TCGA-B6-A0I9-01A 4 23 CDS-5'UTR Intra-chr q14.1 85088 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2orf48-UQCC1 C2orf48 chr2 10141954 + UQCC1 chr20 35347272 - Exonic hg38 BRCA TCGA-B6-A0I9-01A 5 16 5'UTR-CDS Inter-chr p25.1 q11.22 85089 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCHSD2-NBPF4 FCHSD2 chr11 73140031 - NBPF4 chr1 108234411 - Exonic hg38 BRCA TCGA-B6-A0I9-01A 8 3 CDS-5'UTR Inter-chr q13.4 p13.3 Seq+ 85090 ChimerSeq TCGA FAWG TCGA_RNA-Seq PMEPA1-FAM83C PMEPA1 chr20 57709474 - FAM83C chr20 35288958 - Exonic hg38 BRCA TCGA-B6-A0I9-01A 5 15 Out-of-frame Intra-chr q13.31 q11.22 Seq+ 85091 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPSNAP3A-TMEFF1 NIPSNAP3A chr9 104747852 + TMEFF1 chr9 100547744 + Exonic hg38 BRCA TCGA-B6-A0I9-01A 3 15 Out-of-frame Intra-chr q31.1 q31.1 Tumor suppressor gene Seq+ 85092 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-ISPD PPFIA1 chr11 70355811 + ISPD chr7 16301466 - Exonic hg38 BRCA TCGA-B6-A0I9-01A 4 11 Out-of-frame Inter-chr q13.3 p21.2 Seq+ 85093 ChimerSeq TCGA FAWG TCGA_RNA-Seq RORA-ARNT2 RORA chr15 61229053 - ARNT2 chr15 80593600 + Exonic hg38 BRCA TCGA-B6-A0I9-01A 4 8 Out-of-frame Intra-chr q22.2 Transcription factor q25.1 Transcription factor Seq+ 85094 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM25-MSI2 TRIM25 chr17 56895343 - MSI2 chr17 57596868 + Exonic hg38 BRCA TCGA-B6-A0I9-01A 2 15 In-Frame Intra-chr q22 q22 Seq+ 85095 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIP11-NUBPL TRIP11 chr14 91972717 - NUBPL chr14 31826629 + Exonic hg38 BRCA TCGA-B6-A0I9-01A 1 18 In-Frame Intra-chr q32.12 Oncogene q12 85096 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED1-ARHGAP23 MED1 chr17 39447798 - ARHGAP23 chr17 38458102 + Exonic hg38 BRCA TCGA-B6-A0I9-01A 2 12 CDS-3'UTR Intra-chr q12 Tumor suppressor gene q12 Seq+ 85097 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK3-MIA2 MARK3 chr14 103386080 + MIA2 chr14 39246911 + Exonic hg38 BRCA TCGA-B6-A0I9-01A 1 10 In-Frame Intra-chr q32.32 CAMK:CAMKL q21.1 Tumor suppressor gene 85098 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS35-TMEM189 VPS35 chr16 46671705 - TMEM189 chr20 50130947 - Exonic hg38 BRCA TCGA-B6-A0I9-01A 1 8 Out-of-frame Inter-chr q11.2 q13.13 85099 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCB7-ACSS2 ABCB7 chrX 75070365 - ACSS2 chr20 34913096 + Exonic hg38 BRCA TCGA-B6-A0I9-01A 1 3 Out-of-frame Inter-chr q13.3 q11.22 85100 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREBBP-NUBP1 CREBBP chr16 3769174 - NUBP1 chr16 10752610 + Exonic hg38 BRCA TCGA-B6-A0IA-01A 55 211 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.13 Seq+ 85101 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP153-GCNT2 NUP153 chr6 17688396 - GCNT2 chr6 10509087 + Exonic hg38 BRCA TCGA-B6-A0IA-01A 7 34 CDS-3'UTR Intra-chr p22.3 p24.3 Seq+ 85102 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA3C-AUTS2 SEMA3C chr7 80789306 - AUTS2 chr7 70435752 + Exonic hg38 BRCA TCGA-B6-A0IC-01A 5 5 Out-of-frame Intra-chr q21.11 q11.22 Seq+ 85103 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLTB-SIL1 CLTB chr5 176410257 - SIL1 chr5 138951884 - Exonic hg38 BRCA TCGA-B6-A0IE-01A 3 14 Out-of-frame Intra-chr q35.2 q31.2 Seq+ 85104 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM111B-MS4A5 FAM111B chr11 59109706 + MS4A5 chr11 60430796 + Exonic hg38 BRCA TCGA-B6-A0IG-01A 59 215 In-Frame Intra-chr q12.1 q12.2 Seq+ 85105 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRG4-RAPGEFL1 PRRG4 chr11 32830632 + RAPGEFL1 chr17 40188866 + Exonic hg38 BRCA TCGA-B6-A0IG-01A 13 83 Out-of-frame Inter-chr p13 q21.1 Seq+ 85106 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED24-CEP95 MED24 chr17 40053298 - CEP95 chr17 64521402 + Exonic hg38 BRCA TCGA-B6-A0IG-01A 6 58 Out-of-frame Intra-chr q21.1 q23.3 Seq+ 85107 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERC1-PIK3C2G ERC1 chr12 1190052 + PIK3C2G chr12 18488449 + Exonic hg38 BRCA TCGA-B6-A0IG-01A 13 25 In-Frame Intra-chr p12.3 Seq+ 85108 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCN8A-SRGAP1 SCN8A chr12 51590673 + SRGAP1 chr12 63983947 + Exonic hg38 BRCA TCGA-B6-A0IG-01A 4 16 5'UTR-CDS Intra-chr q13.13 q14.2 85109 ChimerSeq TCGA FAWG TCGA_RNA-Seq EZH1-TOP2A EZH1 chr17 42702877 - TOP2A chr17 40404883 - Exonic hg38 BRCA TCGA-B6-A0IG-01A 2 7 Out-of-frame Intra-chr q21.2 Tumor suppressor gene q21.2 Seq+ 85110 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC1-NDUFAF6 DNAJC1 chr10 21882282 - NDUFAF6 chr8 95116270 + Exonic hg38 BRCA TCGA-B6-A0IH-01A 5 22 CDS-5'UTR Inter-chr p12.31 q22.1 Seq+ 85111 ChimerSeq TCGA FAWG TCGA_RNA-Seq SON-C10orf11 SON chr21 33559775 + C10orf11 chr10 76324401 + Exonic hg38 BRCA TCGA-B6-A0IH-01A 2 30 Out-of-frame Inter-chr q22.11 Transcription factor Seq+ 85112 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC1-PLEKHF2 DNAJC1 chr10 21882282 - PLEKHF2 chr8 95154031 + Exonic hg38 BRCA TCGA-B6-A0IH-01A 4 7 CDS-5'UTR Inter-chr p12.31 q22.1 Seq+ 85113 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFF3-TMEM182 AFF3 chr2 99593195 - TMEM182 chr2 102762587 + Exonic hg38 BRCA TCGA-B6-A0IH-01A 1 4 In-Frame Intra-chr q11.2 Oncogene q12.1 Seq+ 85114 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYH9-NFYC MYH9 chr22 36387807 - NFYC chr1 40738836 + Exonic hg38 BRCA TCGA-B6-A0IJ-01A 109 303 5'UTR-5'UTR Inter-chr q12.3 Oncogene Tumor suppressor gene p34.2 Transcription factor Seq+ 85115 ChimerSeq TCGA FAWG TCGA_RNA-Seq GGA1-TRIOBP GGA1 chr22 37608903 + TRIOBP chr22 37765670 + Exonic hg38 BRCA TCGA-B6-A0IJ-01A 32 39 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 85116 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIB1-NSMCE2 TRIB1 chr8 125431262 + NSMCE2 chr8 125357219 + Exonic hg38 BRCA TCGA-B6-A0IJ-01A 11 22 Out-of-frame Intra-chr q24.13 q24.13 Seq+ 85117 ChimerSeq TCGA FAWG TCGA_RNA-Seq THTPA-MMP14 THTPA chr14 23560108 + MMP14 chr14 22844380 + Exonic hg38 BRCA TCGA-B6-A0IJ-01A 9 26 Out-of-frame Intra-chr q11.2 q11.2 85118 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF148-FHAD1 ZNF148 chr3 125288103 - FHAD1 chr1 15362642 + Exonic hg38 BRCA TCGA-B6-A0IJ-01A 4 12 Out-of-frame Inter-chr q21.2 Transcription factor p36.21 Seq+ 85119 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLIPR2-RECK GLIPR2 chr9 36150949 + RECK chr9 36116985 + Exonic hg38 BRCA TCGA-B6-A0IJ-01A 2 16 Out-of-frame Intra-chr p13.3 p13.3 Tumor suppressor gene Seq+ 85120 ChimerSeq TCGA FAWG TCGA_RNA-Seq LTN1-RWDD2B LTN1 chr21 28992764 - RWDD2B chr21 29008621 - Exonic hg38 BRCA TCGA-B6-A0IJ-01A 2 8 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 85121 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGAT3-WWC1 MGAT3 chr22 39457557 + WWC1 chr5 168428033 + Exonic hg38 BRCA TCGA-B6-A0IJ-01A 3 1 5'UTR-CDS Inter-chr q13.1 q34 Seq+ 85122 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-DGAT2 UVRAG chr11 75815524 + DGAT2 chr11 75796328 + Exonic hg38 BRCA TCGA-B6-A0IK-01A 19 16 In-Frame Intra-chr q13.5 Tumor suppressor gene q13.5 Seq+ 85123 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-TBC1D3P1 BCAS3 chr17 60808076 + TBC1D3P1 chr17 60011664 - Exonic hg38 BRCA TCGA-B6-A0IK-01A 2 5 Out-of-frame Intra-chr q23.2 q23.1 85124 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF216-ST14 RNF216 chr7 5711761 - ST14 chr11 130188114 + Exonic hg38 BRCA TCGA-B6-A0IM-01A 16 81 In-Frame Inter-chr p22.1 q24.3 Seq+ 85125 ChimerSeq TCGA FAWG TCGA_RNA-Seq EDC3-SNX29 EDC3 chr15 74695880 - SNX29 chr16 12199601 + Exonic hg38 BRCA TCGA-B6-A0IM-01A 21 40 5'UTR-CDS Inter-chr q24.1 p13.13 Seq+ 85126 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO9A-CRAMP1 MYO9A chr15 72045724 - CRAMP1 chr16 1632212 + Exonic hg38 BRCA TCGA-B6-A0IM-01A 2 25 In-Frame Inter-chr q23 p13.3 85127 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARA-SKAP1 RARA chr17 40331396 + SKAP1 chr17 48137337 - Exonic hg38 BRCA TCGA-B6-A0IN-01A 59 365 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q21.32 Seq+ 85128 ChimerSeq TCGA FAWG TCGA_RNA-Seq APPBP2-DCAF7 APPBP2 chr17 60525794 - DCAF7 chr17 63578470 + Exonic hg38 BRCA TCGA-B6-A0IN-01A 4 14 In-Frame Intra-chr q23.2 q23.3 Seq+ 85129 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUL1-GIMAP5 CUL1 chr7 148787120 + GIMAP5 chr7 150740879 + Exonic hg38 BRCA TCGA-B6-A0IN-01A 3 11 CDS-5'UTR Intra-chr q36.1 Tumor suppressor gene q36.1 Seq+ 85130 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNB-SBF1 PITPNB chr22 27910964 - SBF1 chr22 50447453 - Exonic hg38 BRCA TCGA-B6-A0IN-01A 2 10 Out-of-frame Intra-chr q12.1 q13.33 Seq+ 85131 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-APPBP2 BCAS3 chr17 60990235 + APPBP2 chr17 60500487 - Exonic hg38 BRCA TCGA-B6-A0IN-01A 3 4 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 85132 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK3-LARGE1 SHANK3 chr22 50684651 + LARGE1 chr22 33856802 - Exonic hg38 BRCA TCGA-B6-A0IN-01A 2 6 3'UTR-5'UTR Intra-chr q12.3 85133 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM7A-SND1 KDM7A chr7 140094056 - SND1 chr7 127990947 + Exonic hg38 BRCA TCGA-B6-A0IN-01A 2 2 Out-of-frame Intra-chr q34 q32.1 85134 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKM-MCTP2 PKM chr15 72217409 - MCTP2 chr15 94398961 + Exonic hg38 BRCA TCGA-B6-A0IO-01A 4 29 In-Frame Intra-chr q23 q26.2 Seq+ 85135 ChimerSeq TCGA FAWG TCGA_RNA-Seq BBS4-TTC23 BBS4 chr15 72731726 + TTC23 chr15 99221864 - Exonic hg38 BRCA TCGA-B6-A0IO-01A 6 18 Out-of-frame Intra-chr q24.1 q26.3 Seq+ 85136 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE8A-CIB1 PDE8A chr15 84982348 + CIB1 chr15 90233703 - Exonic hg38 BRCA TCGA-B6-A0IO-01A 5 14 In-Frame Intra-chr q25.3 q26.1 Seq+ 85137 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPF39-PSMA6 PRPF39 chr14 45084249 + PSMA6 chr14 35307994 + Exonic hg38 BRCA TCGA-B6-A0IO-01A 2 3 5'UTR-5'UTR Intra-chr q21.2 q13.2 Seq+ 85138 ChimerSeq TCGA FAWG TCGA_RNA-Seq COMMD10-DGKI COMMD10 chr5 116134178 + DGKI chr7 137391336 - Exonic hg38 BRCA TCGA-B6-A0IO-01A 1 5 In-Frame Inter-chr q23.1 q33 Seq+ 85139 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBMS1-XIRP2 RBMS1 chr2 160493289 - XIRP2 chr2 167210735 + Exonic hg38 BRCA TCGA-B6-A0IO-01A 1 3 Out-of-frame Intra-chr q24.2 q24.3 85140 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA4-PARGP1 NCOA4 chr10 46030526 - PARGP1 chr10 45863114 - Exonic hg38 BRCA TCGA-B6-A0IQ-01A 33 82 5'UTR-3'UTR Intra-chr q11.22 Oncogene Tumor suppressor gene q11.22 85141 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBX1-CTNNA3 PBX1 chr1 164812149 + CTNNA3 chr10 66775524 - Exonic hg38 BRCA TCGA-B6-A0IQ-01A 22 50 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor q21.3 Tumor suppressor gene Seq+ 85142 ChimerSeq TCGA FAWG TCGA_RNA-Seq UTRN-ECT2L UTRN chr6 144577288 + ECT2L chr6 138900948 + Exonic hg38 BRCA TCGA-B6-A0IQ-01A 15 27 Out-of-frame Intra-chr q24.2 q24.1 Seq+ 85143 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIA-LTV1 NFIA chr1 61277585 + LTV1 chr6 143846051 + Exonic hg38 BRCA TCGA-B6-A0IQ-01A 3 14 Out-of-frame Inter-chr p31.3 Transcription factor q24.2 Seq+ 85144 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEX7-MED23 PEX7 chr6 136898241 + MED23 chr6 131574295 - Exonic hg38 BRCA TCGA-B6-A0IQ-01A 1 19 In-Frame Intra-chr q23.3 q23.2 Seq+ 85145 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP7-ARG1 MAP7 chr6 136550342 - ARG1 chr6 131583060 + Exonic hg38 BRCA TCGA-B6-A0IQ-01A 2 9 Out-of-frame Intra-chr q23.3 q23.2 Tumor suppressor gene Seq+ 85146 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP7-CNKSR3 MAP7 chr6 136365735 - CNKSR3 chr6 154450258 - Exonic hg38 BRCA TCGA-B6-A0IQ-01A 3 4 In-Frame Intra-chr q23.3 q25.2 Seq+ 85147 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF470-ZNF835 ZNF470 chr19 56574733 + ZNF835 chr19 56665245 - Exonic hg38 BRCA TCGA-B6-A0IQ-01A 1 8 CDS-5'UTR Intra-chr q13.43 Transcription factor q13.43 Transcription factor 85148 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF823-VAV1 ZNF823 chr19 11738817 - VAV1 chr19 6820702 + Exonic hg38 BRCA TCGA-B6-A0IQ-01A 2 4 In-Frame Intra-chr p13.2 Transcription factor p13.3 Seq+ 85149 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSAD-ZYG11B CSAD chr12 53160120 - ZYG11B chr1 52756458 + Exonic hg38 BRCA TCGA-B6-A0IQ-01A 1 5 Out-of-frame Inter-chr q13.13 p32.3 85150 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYTL3-AIG1 SYTL3 chr6 158713878 + AIG1 chr6 143187629 + Exonic hg38 BRCA TCGA-B6-A0IQ-01A 2 1 Out-of-frame Intra-chr q25.3 q24.2 85151 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPO7-H2AFY2 XPO7 chr8 21919788 + H2AFY2 chr10 70090060 + Exonic hg38 BRCA TCGA-B6-A0IQ-01A 1 4 Out-of-frame Inter-chr p21.3 q22.1 85152 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANXA2-SMG1 ANXA2 chr15 60354154 - SMG1 chr16 18872624 - Exonic hg38 BRCA TCGA-B6-A0IQ-01A 1 1 In-Frame Inter-chr q22.2 p12.3 Atypical:PIKK 85153 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGPP2-ALG14 SGPP2 chr2 222525033 + ALG14 chr1 95027260 - Exonic hg38 BRCA TCGA-B6-A0RE-01A 9 34 In-Frame Inter-chr q36.1 p21.3 Seq+ 85154 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD9-PBXIP1 CD9 chr12 6200565 + PBXIP1 chr1 154945117 - Exonic hg38 BRCA TCGA-B6-A0RE-01A 13 16 Out-of-frame Inter-chr p13.31 q21.3 Seq+ 85155 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM45B-BARX2 TMEM45B chr11 129815898 + BARX2 chr11 129436751 + Exonic hg38 BRCA TCGA-B6-A0RE-01A 4 5 5'UTR-CDS Intra-chr q24.3 q24.3 Transcription factor Seq+ 85156 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASGRP1-LRRC4C RASGRP1 chr15 38559821 - LRRC4C chr11 40140853 - Exonic hg38 BRCA TCGA-B6-A0RG-01A 3 13 CDS-5'UTR Inter-chr q14 p12 Seq+ 85157 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKL2-FSTL3 MKL2 chr16 14140760 + FSTL3 chr19 681650 + Exonic hg38 BRCA TCGA-B6-A0RG-01A 1 17 Out-of-frame Inter-chr p13.12 p13.3 Seq+ 85158 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2A2-RRP1 ATP2A2 chr12 110343434 + RRP1 chr21 43791350 + Exonic hg38 BRCA TCGA-B6-A0RH-01A 38 99 In-Frame Inter-chr q24.11 q22.3 Seq+ 85159 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID2-TMPRSS2 ARID2 chr12 45839496 + TMPRSS2 chr21 41530214 - Exonic hg38 BRCA TCGA-B6-A0RH-01A 3 59 CDS-5'UTR Inter-chr q12 Oncogene Tumor suppressor gene Transcription factor q22.3 Seq+ 85160 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK12-JUP CDK12 chr17 39501439 + JUP chr17 41771862 - Exonic hg38 BRCA TCGA-B6-A0RH-01A 5 4 CDS-5'UTR Intra-chr q12 Oncogene q21.2 Tumor suppressor gene Seq+ 85161 ChimerSeq TCGA FAWG TCGA_RNA-Seq LITAF-ABCA17P LITAF chr16 11586886 - ABCA17P chr16 2361116 + Exonic hg38 BRCA TCGA-B6-A0RI-01A 36 110 5'UTR-5'UTR Intra-chr p13.13 Tumor suppressor gene p13.3 Seq+ 85162 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPIG-CRIM1 PPIG chr2 169584490 + CRIM1 chr2 36499219 + Exonic hg38 BRCA TCGA-B6-A0RI-01A 9 62 5'UTR-CDS Intra-chr q31.1 p22.2 Seq+ 85163 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS15L1-ZNF675 EPS15L1 chr19 16413773 - ZNF675 chr19 23574232 - Exonic hg38 BRCA TCGA-B6-A0RL-01A 10 16 3'UTR-3'UTR Intra-chr p13.11 p12 Transcription factor Seq+ 85164 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPCN2-RAB11FIP1 TPCN2 chr11 69063967 + RAB11FIP1 chr8 37863113 - Exonic hg38 BRCA TCGA-B6-A0RL-01A 2 17 In-Frame Inter-chr q13.3 p11.23 Seq+ 85165 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLPB-C2CD3 CLPB chr11 72329707 - C2CD3 chr11 74106493 - Exonic hg38 BRCA TCGA-B6-A0RL-01A 3 6 In-Frame Intra-chr q13.4 q13.4 Seq+ 85166 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPME1-AQP11 PPME1 chr11 74204445 + AQP11 chr11 77609298 + Exonic hg38 BRCA TCGA-B6-A0RL-01A 3 6 Out-of-frame Intra-chr q13.4 q14.1 Seq+ 85167 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD3-RSF1 NSD3 chr8 38337305 - RSF1 chr11 77691238 - Exonic hg38 BRCA TCGA-B6-A0RL-01A 2 7 Out-of-frame Inter-chr p11.23 Tumor suppressor gene q14.1 85168 ChimerSeq TCGA FAWG TCGA_RNA-Seq NYAP2-KCNU1 NYAP2 chr2 225409101 + KCNU1 chr8 36905708 + Exonic hg38 BRCA TCGA-B6-A0RL-01A 3 1 In-Frame Inter-chr q36.3 p11.23 85169 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPME1-NSD3 PPME1 chr11 74222369 + NSD3 chr8 38338607 - Exonic hg38 BRCA TCGA-B6-A0RL-01A 1 5 Out-of-frame Inter-chr q13.4 p11.23 Tumor suppressor gene 85170 ChimerSeq TCGA FAWG TCGA_RNA-Seq RICTOR-FGF10 RICTOR chr5 39074111 - FGF10 chr5 44310530 - Exonic hg38 BRCA TCGA-B6-A0RL-01A 1 2 In-Frame Intra-chr p13.1 p12 85171 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF492-FCHO1 ZNF492 chr19 22634421 + FCHO1 chr19 17786574 + Exonic hg38 BRCA TCGA-B6-A0RL-01A 1000 1000 5'UTR-CDS Intra-chr p12 Transcription factor p13.11 85172 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTAN1-AUH SPTAN1 chr9 128568897 + AUH chr9 91325404 - Exonic hg38 BRCA TCGA-B6-A0RM-01A 3 19 Out-of-frame Intra-chr q34.11 q22.31 Seq+ 85173 ChimerSeq TCGA FAWG TCGA_RNA-Seq HEATR3-CHRNB3 HEATR3 chr16 50066539 + CHRNB3 chr8 42730594 + Exonic hg38 BRCA TCGA-B6-A0RM-01A 2 6 Out-of-frame Inter-chr q12.1 p11.21 Seq+ 85174 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH1-DEXI CDH1 chr16 68808848 + DEXI chr16 10929559 - Exonic hg38 BRCA TCGA-B6-A0RN-01A 45 310 CDS-3'UTR Intra-chr q22.1 Oncogene Tumor suppressor gene p13.13 Seq+ 85175 ChimerSeq TCGA FAWG TCGA_RNA-Seq DEXI-CDH1 DEXI chr16 10933844 - CDH1 chr16 68810197 + Exonic hg38 BRCA TCGA-B6-A0RN-01A 3 12 3'UTR-CDS Intra-chr p13.13 q22.1 Oncogene Tumor suppressor gene Seq+ 85176 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBB2B-PAQR5 TUBB2B chr6 3231556 - PAQR5 chr15 69379884 + Exonic hg38 BRCA TCGA-B6-A0RO-01A 16 32 Out-of-frame Inter-chr p25.2 q23 Seq+ 85177 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERPINA3-CPB1 SERPINA3 chr14 94615084 + CPB1 chr3 148845424 + Exonic hg38 BRCA TCGA-B6-A0RP-01A 1 3 5'UTR-CDS Inter-chr q32.13 q24 85178 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF83-ZNF444 ZNF83 chr19 52690443 - ZNF444 chr19 56158494 + Exonic hg38 BRCA TCGA-B6-A0RQ-01A 1 1 5'UTR-CDS Intra-chr q13.41 Transcription factor q13.43 Transcription factor 85179 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKAA1-RPL37 PRKAA1 chr5 40798063 - RPL37 chr5 40834606 - Exonic hg38 BRCA TCGA-B6-A0RS-01A 97 401 Out-of-frame Intra-chr p13.1 Tumor suppressor gene p13.1 Seq+ 85180 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-ANXA13 SHANK2 chr11 71224697 - ANXA13 chr8 123712753 - Exonic hg38 BRCA TCGA-B6-A0RS-01A 49 175 5'UTR-CDS Inter-chr q13.4 q24.13 Seq+ 85181 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREB3L2-ATP6V0A4 CREB3L2 chr7 137879290 - ATP6V0A4 chr7 138749317 - Exonic hg38 BRCA TCGA-B6-A0RS-01A 5 32 3'UTR-CDS Intra-chr q33 Transcription factor q34 Seq+ 85182 ChimerSeq TCGA FAWG TCGA_RNA-Seq XXYLT1-ACAP2 XXYLT1 chr3 195270555 - ACAP2 chr3 195345317 - Exonic hg38 BRCA TCGA-B6-A0RS-01A 7 10 In-Frame Intra-chr q29 q29 Seq+ 85183 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPATA33-DPEP1 SPATA33 chr16 89658421 + DPEP1 chr16 89630305 + Exonic hg38 BRCA TCGA-B6-A0RS-01A 3 16 5'UTR-5'UTR Intra-chr q24.3 q24.3 85184 ChimerSeq TCGA FAWG TCGA_RNA-Seq UPF2-PPP2R5C UPF2 chr10 11942665 - PPP2R5C chr14 101786018 + Exonic hg38 BRCA TCGA-B6-A0RS-01A 2 11 In-Frame Inter-chr p14 q32.31 Tumor suppressor gene Seq+ 85185 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKAL1-HSP90AA1 CDKAL1 chr6 20535394 + HSP90AA1 chr14 102102085 - Exonic hg38 BRCA TCGA-B6-A0RS-01A 2 8 5'UTR-CDS Inter-chr p22.3 q32.31 Oncogene Seq+ 85186 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETFB-LIM2 ETFB chr19 51354150 - LIM2 chr19 51380639 - Exonic hg38 BRCA TCGA-B6-A0RT-01A 23 110 Out-of-frame Intra-chr q13.41 q13.41 Seq+ 85187 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAI-PPP6C SCAI chr9 125142633 - PPP6C chr9 125149921 - Exonic hg38 BRCA TCGA-B6-A0RT-01A 7 27 Out-of-frame Intra-chr q33.3 q33.3 Seq+ 85188 ChimerSeq TCGA FAWG TCGA_RNA-Seq PREP-PLN PREP chr6 105397853 - PLN chr6 118558825 + Exonic hg38 BRCA TCGA-B6-A0RT-01A 7 26 CDS-5'UTR Intra-chr q21 q22.31 Seq+ 85189 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNA-NXN PITPNA chr17 1541566 - NXN chr17 826078 - Exonic hg38 BRCA TCGA-B6-A0RT-01A 6 27 In-Frame Intra-chr p13.3 p13.3 Seq+ 85190 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF19A-SLC41A3 RNF19A chr8 100336108 - SLC41A3 chr3 126012749 - Exonic hg38 BRCA TCGA-B6-A0RT-01A 7 12 5'UTR-CDS Inter-chr q22.2 q21.3 Seq+ 85191 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A23-SLC2A9 SLC25A23 chr19 6456420 - SLC2A9 chr4 9771369 - Exonic hg38 BRCA TCGA-B6-A0RT-01A 8 7 CDS-3'UTR Inter-chr p13.3 p16.1 85192 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLTM-UACA SLTM chr15 58916935 - UACA chr15 70699660 - Exonic hg38 BRCA TCGA-B6-A0RT-01A 2 28 In-Frame Intra-chr q22.1 q23 Seq+ 85193 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEAD1-CAP2 TEAD1 chr11 12675561 + CAP2 chr6 17462996 + Exonic hg38 BRCA TCGA-B6-A0RT-01A 3 24 5'UTR-CDS Inter-chr p15.3 Transcription factor p22.3 Seq+ 85194 ChimerSeq TCGA FAWG TCGA_RNA-Seq HPN-PPP2R5C HPN chr19 35042522 + PPP2R5C chr14 101836169 + Exonic hg38 BRCA TCGA-B6-A0RT-01A 5 15 CDS-5'UTR Inter-chr q13.11 q32.31 Tumor suppressor gene Seq+ 85195 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R5C-SCN1B PPP2R5C chr14 101810036 + SCN1B chr19 35032528 + Exonic hg38 BRCA TCGA-B6-A0RT-01A 1 29 In-Frame Inter-chr q32.31 Tumor suppressor gene q13.11 Seq+ 85196 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEK9-TMED10 NEK9 chr14 75126703 - TMED10 chr14 75135886 - Exonic hg38 BRCA TCGA-B6-A0RT-01A 3 18 In-Frame Intra-chr q24.3 Other:NEK q24.3 Seq+ 85197 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLC1-APOPT1 KLC1 chr14 103629494 + APOPT1 chr14 103590181 + Exonic hg38 BRCA TCGA-B6-A0RT-01A 5 7 Out-of-frame Intra-chr q32.33 q32.33 Seq+ 85198 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCCPDH-CNST SCCPDH chr1 246727004 + CNST chr1 246660199 + Exonic hg38 BRCA TCGA-B6-A0RT-01A 4 11 In-Frame Intra-chr q44 q44 Seq+ 85199 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNM1-CABP2 PITPNM1 chr11 67499723 - CABP2 chr11 67520160 - Exonic hg38 BRCA TCGA-B6-A0RT-01A 1 15 In-Frame Intra-chr q13.2 q13.2 Seq+ 85200 ChimerSeq TCGA FAWG TCGA_RNA-Seq IARS-NOL8 IARS chr9 92285722 - NOL8 chr9 92311259 - Exonic hg38 BRCA TCGA-B6-A0RT-01A 2 4 In-Frame Intra-chr q22.31 q22.31 Seq+ 85201 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFT74-LDLRAD3 IFT74 chr9 26962087 + LDLRAD3 chr11 36227085 + Exonic hg38 BRCA TCGA-B6-A0RT-01A 1 4 Out-of-frame Inter-chr p21.2 p13 Seq+ 85202 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAP1GAP2-SGSM2 RAP1GAP2 chr17 2998376 + SGSM2 chr17 2377857 + Exonic hg38 BRCA TCGA-B6-A0RT-01A 1 4 In-Frame Intra-chr p13.3 p13.3 Transcription factor 85203 ChimerSeq TCGA FAWG TCGA_RNA-Seq TESMIN-CPT1A TESMIN chr11 68747208 - CPT1A chr11 68761687 - Exonic hg38 BRCA TCGA-B6-A0RU-01A 28 42 In-Frame Intra-chr q13.3 q13.3 85204 ChimerSeq TCGA FAWG TCGA_RNA-Seq DEPDC1B-NPBWR1 DEPDC1B chr5 60686962 - NPBWR1 chr8 52939711 + Exonic hg38 BRCA TCGA-B6-A0RU-01A 4 2 CDS-5'UTR Inter-chr q12.1 q11.23 85205 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD9-RAD51B CHD9 chr16 53157541 + RAD51B chr14 68291884 + Exonic hg38 BRCA TCGA-B6-A0RU-01A 2 8 In-Frame Inter-chr q12.2 q24.1 Seq+ 85206 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL6A2-PRDX2 COL6A2 chr21 46118676 + PRDX2 chr19 12801270 - Exonic hg38 BRCA TCGA-B6-A0RU-01A 2 5 CDS-5'UTR Inter-chr q22.3 p13.13 85207 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM63A-LPAR1 TMEM63A chr1 225848492 - LPAR1 chr9 110973558 - Exonic hg38 BRCA TCGA-B6-A0RU-01A 1 5 CDS-5'UTR Inter-chr q42.12 q31.3 85208 ChimerSeq TCGA FAWG TCGA_RNA-Seq QSER1-GAS2 QSER1 chr11 32893334 + GAS2 chr11 22726292 + Exonic hg38 BRCA TCGA-B6-A0WT-01A 4 13 Out-of-frame Intra-chr p13 p14.3 Seq+ 85209 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF13B-EPN2 KIF13B chr8 29245346 - EPN2 chr17 19281955 + Exonic hg38 BRCA TCGA-B6-A0WV-01A 13 29 CDS-5'UTR Inter-chr p12 p11.2 Seq+ 85210 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED24-SSH2 MED24 chr17 40053298 - SSH2 chr17 29703062 - Exonic hg38 BRCA TCGA-B6-A0WV-01A 2 9 Out-of-frame Intra-chr q21.1 q11.2 Seq+ 85211 ChimerSeq TCGA FAWG TCGA_RNA-Seq C22orf29-HIRA C22orf29 chr22 19854443 - HIRA chr22 19331556 - Exonic hg38 BRCA TCGA-B6-A0WW-01A 2 7 Out-of-frame Intra-chr q11.21 q11.21 Tumor suppressor gene Seq+ 85212 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNB1L-HIRA GNB1L chr22 19854443 - HIRA chr22 19331556 - Exonic hg38 BRCA TCGA-B6-A0WW-01A 2 7 5'UTR-CDS Intra-chr q11.21 q11.21 Tumor suppressor gene Seq+ 85213 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDHD2-GPAT4 DDHD2 chr8 38233214 + GPAT4 chr8 41598292 + Exonic hg38 BRCA TCGA-B6-A0WW-01A 1 3 5'UTR-5'UTR Intra-chr p11.23 p11.21 85214 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACVR1B-PCBP2 ACVR1B chr12 51951834 + PCBP2 chr12 53455885 + Exonic hg38 BRCA TCGA-B6-A0WX-01A 4 20 Out-of-frame Intra-chr q13.13 Oncogene q13.13 Seq+ 85215 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC24A3-PLCB4 SLC24A3 chr20 19585544 + PLCB4 chr20 9362896 + Exonic hg38 BRCA TCGA-B6-A0WX-01A 1 6 In-Frame Intra-chr p11.23 p12.3 Seq+ 85216 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC6B-COL18A1 TNRC6B chr22 40044998 + COL18A1 chr21 45468242 + Exonic hg38 BRCA TCGA-B6-A0WY-01A 1 9 5'UTR-CDS Inter-chr q13.1 q22.3 85217 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNMT1-OLFM2 DNMT1 chr19 10231204 - OLFM2 chr19 9860794 - Exonic hg38 BRCA TCGA-B6-A0WY-01A 1 4 5'UTR-CDS Intra-chr p13.2 Oncogene Tumor suppressor gene Transcription factor p13.2 Seq+ 85218 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEXN-AK5 NEXN chr1 77933479 + AK5 chr1 77483317 + Exonic hg38 BRCA TCGA-B6-A0X1-01A 11 54 In-Frame Intra-chr p31.1 p31.1 Seq+ 85219 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM2-ARFIP1 TRIM2 chr4 153152612 + ARFIP1 chr4 152829625 + Exonic hg38 BRCA TCGA-B6-A0X1-01A 6 21 5'UTR-5'UTR Intra-chr q31.3 q31.3 Seq+ 85220 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM49A-PRR4 FAM49A chr2 16623864 - PRR4 chr12 10973721 - Exonic hg38 BRCA TCGA-B6-A0X1-01A 6 8 5'UTR-5'UTR Inter-chr p24.2 85221 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASAP1-KCNH1 ASAP1 chr8 130076348 - KCNH1 chr1 210804166 - Exonic hg38 BRCA TCGA-B6-A0X1-01A 5 8 In-Frame Inter-chr q24.22 Seq+ 85222 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALOX12P2-WSCD1 ALOX12P2 chr17 6854453 + WSCD1 chr17 6080371 + Exonic hg38 BRCA TCGA-B6-A0X1-01A 2 18 5'UTR-5'UTR Intra-chr p13.1 p13.2 85223 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO9-DEAF1 ANO9 chr11 428088 - DEAF1 chr11 654051 - Exonic hg38 BRCA TCGA-B6-A0X1-01A 3 14 CDS-5'UTR Intra-chr p15.5 Transcription factor Seq+ 85224 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF6-RCSD1 DCAF6 chr1 167937008 + RCSD1 chr1 167683900 + Exonic hg38 BRCA TCGA-B6-A0X1-01A 4 5 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 85225 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBCE-TBC1D22A TBCE chr1 235380149 + TBC1D22A chr22 47111508 + Exonic hg38 BRCA TCGA-B6-A0X1-01A 1 17 3'UTR-CDS Inter-chr q13.31 Seq+ 85226 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX42-HSF5 DDX42 chr17 63774376 + HSF5 chr17 58422430 - Exonic hg38 BRCA TCGA-B6-A0X1-01A 2 10 5'UTR-CDS Intra-chr q23.3 q22 Transcription factor Seq+ 85227 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIST1H2AC-C6orf89 HIST1H2AC chr6 26124245 + C6orf89 chr6 36879008 + Exonic hg38 BRCA TCGA-B6-A0X1-01A 4 1 CDS-5'UTR Intra-chr p22.2 p21.2 85228 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACAD9-RAB7A ACAD9 chr3 128884746 + RAB7A chr3 128813327 + Exonic hg38 BRCA TCGA-B6-A0X1-01A 3 1 Out-of-frame Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 85229 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX42-RNF43 DDX42 chr17 63775178 + RNF43 chr17 58371033 - Exonic hg38 BRCA TCGA-B6-A0X1-01A 1 8 5'UTR-5'UTR Intra-chr q23.3 q22 Oncogene 85230 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMC5-TJP2 SMC5 chr9 70300200 + TJP2 chr9 69212548 + Exonic hg38 BRCA TCGA-B6-A0X1-01A 2 4 In-Frame Intra-chr q21.12 q21.11 Seq+ 85231 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRMT11-RNF217 TRMT11 chr6 126013101 + RNF217 chr6 125076657 + Exonic hg38 BRCA TCGA-B6-A0X1-01A 1 6 Out-of-frame Intra-chr q22.32 q22.31 Seq+ 85232 ChimerSeq TCGA FAWG TCGA_RNA-Seq C19orf47-NUMBL C19orf47 chr19 40333851 - NUMBL chr19 40673649 - Exonic hg38 BRCA TCGA-B6-A0X1-01A 1 3 In-Frame Intra-chr q13.2 q13.2 85233 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSD17B3-ENPP2 HSD17B3 chr9 96298416 - ENPP2 chr8 119626720 - Exonic hg38 BRCA TCGA-B6-A0X1-01A 1 3 Out-of-frame Inter-chr q22.32 q24.12 Seq+ 85234 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNFRSF11A-KIAA1468 TNFRSF11A chr18 62369484 + KIAA1468 chr18 62287351 + Exonic hg38 BRCA TCGA-B6-A0X1-01A 1 3 Out-of-frame Intra-chr q21.33 q21.33 Seq+ 85235 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREG1-MPC2 CREG1 chr1 167553388 - MPC2 chr1 167935898 - Exonic hg38 BRCA TCGA-B6-A0X1-01A 1 2 CDS-5'UTR Intra-chr q24.2 q24.2 85236 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA4-OR13A1 NCOA4 chr10 46030526 - OR13A1 chr10 45307808 - Exonic hg38 BRCA TCGA-B6-A0X7-01A 5 15 5'UTR-5'UTR Intra-chr q11.22 Oncogene Tumor suppressor gene Seq+ 85237 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALX4-STK33 ALX4 chr11 44267494 - STK33 chr11 8392710 - Exonic hg38 BRCA TCGA-B6-A0X7-01A 4 7 In-Frame Intra-chr p11.2 Transcription factor p15.4 CAMK:CAMK-Unique Seq+ 85238 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF3-FNTA PHF3 chr6 63713175 + FNTA chr8 43064101 + Exonic hg38 BRCA TCGA-B6-A1KC-01B 3 37 Out-of-frame Inter-chr q12 p11.21 Seq+ 85239 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3R1-NDUFB7 PIK3R1 chr5 68281006 + NDUFB7 chr19 14566933 - Exonic hg38 BRCA TCGA-B6-A1KF-01A 36 63 In-Frame Inter-chr q13.1 Oncogene p13.12 Seq+ 85240 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOT1L-TLE6 DOT1L chr19 2180756 + TLE6 chr19 2978198 + Exonic hg38 BRCA TCGA-B6-A1KF-01A 3 38 CDS-5'UTR Intra-chr p13.3 Oncogene Transcription factor p13.3 Seq+ 85241 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCGB2A2-MGP SCGB2A2 chr11 62271068 + MGP chr12 14884245 - Exonic hg38 BRCA TCGA-B6-A1KI-01A 1 22 Out-of-frame Inter-chr q12.3 p12.3 85242 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARA-IGFBP4 RARA chr17 40331396 + IGFBP4 chr17 40452985 + Exonic hg38 BRCA TCGA-B6-A1KN-01A 6 33 In-Frame Intra-chr q21.2 Oncogene Transcription factor q21.2 Tumor suppressor gene Seq+ 85243 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D25-ERLIN2 TBC1D25 chrX 48545023 + ERLIN2 chr8 37749559 + Exonic hg38 BRCA TCGA-B6-A1KN-01A 10 16 In-Frame Inter-chr p11.23 p11.23 Seq+ 85244 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC57-DIAPH2 CCDC57 chr17 82172638 - DIAPH2 chrX 97072941 + Exonic hg38 BRCA TCGA-B6-A1KN-01A 3 22 In-Frame Inter-chr q25.3 q21.33 Seq+ 85245 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-INTS13 FBXL20 chr17 39303585 - INTS13 chr12 26925851 - Exonic hg38 BRCA TCGA-B6-A1KN-01A 3 19 Out-of-frame Inter-chr q12 p11.23 85246 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-CD163L1 FBXL20 chr17 39343180 - CD163L1 chr12 7406852 - Exonic hg38 BRCA TCGA-B6-A1KN-01A 3 9 Out-of-frame Inter-chr q12 p13.31 Seq+ 85247 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO9B-PNN MYO9B chr19 17163122 + PNN chr14 39176527 + Exonic hg38 BRCA TCGA-B6-A1KN-01A 3 9 Out-of-frame Inter-chr p13.11 q21.1 Tumor suppressor gene Seq+ 85248 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSDMC-FAM49B GSDMC chr8 129786011 - FAM49B chr8 129871496 - Exonic hg38 BRCA TCGA-B6-A1KN-01A 1 5 5'UTR-5'UTR Intra-chr q24.21 q24.21 85249 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKAG2-VPS50 PRKAG2 chr7 151876507 - VPS50 chr7 93341427 + Exonic hg38 BRCA TCGA-B6-A2IU-01A 10 14 In-Frame Intra-chr q36.1 q21.2 85250 ChimerSeq TCGA FAWG TCGA_RNA-Seq TET3-ACTG2 TET3 chr2 74003166 + ACTG2 chr2 73908673 + Exonic hg38 BRCA TCGA-B6-A3ZX-01A 142 263 In-Frame Intra-chr p13.1 Transcription factor p13.1 Seq+ 85251 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM222B-MYO18A FAM222B chr17 28842682 - MYO18A chr17 29074914 - Exonic hg38 BRCA TCGA-B6-A3ZX-01A 7 125 5'UTR-CDS Intra-chr q11.2 q11.2 Oncogene Seq+ 85252 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM222B-TIAF1 FAM222B chr17 28842682 - TIAF1 chr17 29074914 - Exonic hg38 BRCA TCGA-B6-A3ZX-01A 7 125 5'UTR-5'UTR Intra-chr q11.2 q11.2 Oncogene Seq+ 85253 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAPD7-SRD5A1 PAPD7 chr5 6743840 + SRD5A1 chr5 6662816 + Exonic hg38 BRCA TCGA-B6-A3ZX-01A 11 33 Out-of-frame Intra-chr p15.31 p15.31 Seq+ 85254 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXK2-MADCAM1 FOXK2 chr17 82520307 + MADCAM1 chr19 501669 + Exonic hg38 BRCA TCGA-B6-A3ZX-01A 5 14 Out-of-frame Inter-chr q25.3 Transcription factor p13.3 Seq+ 85255 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHMP4B-ZNF341 CHMP4B chr20 33852203 + ZNF341 chr20 33740902 + Exonic hg38 BRCA TCGA-B6-A3ZX-01A 3 7 In-Frame Intra-chr q11.22 q11.22 Transcription factor Seq+ 85256 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD58-RAD51B CD58 chr1 116570903 - RAD51B chr14 68291884 + Exonic hg38 BRCA TCGA-B6-A400-01A 2 135 Out-of-frame Inter-chr p13.1 q24.1 Seq+ 85257 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAF3-MYO16 TRAF3 chr14 102886269 + MYO16 chr13 108665886 + Exonic hg38 BRCA TCGA-B6-A400-01A 6 49 Out-of-frame Inter-chr q32.32 Seq+ 85258 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF704-ETNK2 ZNF704 chr8 80640526 - ETNK2 chr1 204132256 - Exonic hg38 BRCA TCGA-B6-A400-01A 9 36 3'UTR-3'UTR Inter-chr q21.13 Transcription factor q32.1 Seq+ 85259 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPX2-ID1 TPX2 chr20 31739621 + ID1 chr20 31605372 + Exonic hg38 BRCA TCGA-B6-A400-01A 4 6 5'UTR-5'UTR Intra-chr q11.21 q11.21 Seq+ 85260 ChimerSeq TCGA FAWG TCGA_RNA-Seq DZIP1-PCCA DZIP1 chr13 95641295 - PCCA chr13 100330561 + Exonic hg38 BRCA TCGA-B6-A400-01A 1 3 Out-of-frame Intra-chr q32.1 Transcription factor q32.3 Seq+ 85261 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPED1-BCO2 CPED1 chr7 121271430 + BCO2 chr11 112213724 + Exonic hg38 BRCA TCGA-B6-A401-01A 2 1 In-Frame Inter-chr q31.31 q23.1 Seq+ 85262 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCNT-MCOLN1 PCNT chr21 46391376 + MCOLN1 chr19 7533523 + Exonic hg38 BRCA TCGA-B6-A402-01A 10 21 Out-of-frame Inter-chr q22.3 p13.2 Seq+ 85263 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF10L-CSDE1 ARHGEF10L chr1 17687747 + CSDE1 chr1 114750207 - Exonic hg38 BRCA TCGA-B6-A402-01A 1 9 5'UTR-5'UTR Intra-chr p36.13 p13.2 Seq+ 85264 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAWR-PTPRR PAWR chr12 79689729 - PTPRR chr12 70698349 - Exonic hg38 BRCA TCGA-B6-A408-01A 6 26 In-Frame Intra-chr q21.2 Tumor suppressor gene q15 Seq+ 85265 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEF1DP3-N4BP2L1 EEF1DP3 chr13 31946181 + N4BP2L1 chr13 32407772 - Exonic hg38 BRCA TCGA-B6-A408-01A 2 11 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 85266 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1orf123-ALG6 C1orf123 chr1 53220261 - ALG6 chr1 63396513 + Exonic hg38 BRCA TCGA-B6-A409-01A 1 8 Out-of-frame Intra-chr p32.3 p31.3 Seq+ 85267 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTTN-BCAR4 CTTN chr11 70409960 + BCAR4 chr16 11820297 - Exonic hg38 BRCA TCGA-B6-A40B-01A 80 353 CDS-3'UTR Inter-chr q13.3 p13.13 Seq+ 85268 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK16-IGHJ5 CDK16 chrX 47218484 + IGHJ5 chr14 105863857 - Exonic hg38 BRCA TCGA-BH-A0AU-01A 28 0 Out-of-frame Inter-chr p11.3 85269 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF17-EP300 ARHGEF17 chr11 73311830 + EP300 chr22 41149038 + Exonic hg38 BRCA TCGA-BH-A0AU-01A 5 32 In-Frame Inter-chr q13.4 q13.2 Oncogene Seq+ 85270 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALG14-NRDC ALG14 chr1 95064866 - NRDC chr1 51810404 - Exonic hg38 BRCA TCGA-BH-A0AU-01A 2 23 In-Frame Intra-chr p21.3 p32.3 85271 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID3A-PMEPA1 ARID3A chr19 968503 + PMEPA1 chr20 57659697 - Exonic hg38 BRCA TCGA-BH-A0AU-01A 1 26 In-Frame Inter-chr p13.3 Transcription factor q13.31 Seq+ 85272 ChimerSeq TCGA FAWG TCGA_RNA-Seq C22orf39-CABIN1 C22orf39 chr22 19383620 - CABIN1 chr22 24164400 + Exonic hg38 BRCA TCGA-BH-A0AU-01A 2 12 3'UTR-CDS Intra-chr q11.21 85273 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIRA-CABIN1 HIRA chr22 19383620 - CABIN1 chr22 24164400 + Exonic hg38 BRCA TCGA-BH-A0AU-01A 2 12 Out-of-frame Intra-chr q11.21 Tumor suppressor gene Seq+ 85274 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGU-UQCC1 PIGU chr20 34616042 - UQCC1 chr20 35366614 - Exonic hg38 BRCA TCGA-BH-A0AU-01A 2 2 Out-of-frame Intra-chr q11.22 q11.22 85275 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPTN-CLUAP1 NPTN chr15 73587524 - CLUAP1 chr16 3530568 + Exonic hg38 BRCA TCGA-BH-A0AV-01A 249 553 In-Frame Inter-chr q24.1 p13.3 Seq+ 85276 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSA2-HEXB NSA2 chr5 74770810 + HEXB chr5 74713506 + Exonic hg38 BRCA TCGA-BH-A0AV-01A 14 127 In-Frame Intra-chr q13.3 q13.3 Seq+ 85277 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRC2B-SET PRRC2B chr9 131479393 + SET chr9 128683780 + Exonic hg38 BRCA TCGA-BH-A0AV-01A 5 22 CDS-5'UTR Intra-chr q34.13 q34.11 Seq+ 85278 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPPL3-CD99L2 SPPL3 chr12 120903845 - CD99L2 chrX 150831293 - Exonic hg38 BRCA TCGA-BH-A0AV-01A 3 3 Out-of-frame Inter-chr q24.31 q28 Seq+ 85279 ChimerSeq TCGA FAWG TCGA_RNA-Seq CA13-RBKS CA13 chr8 85268627 + RBKS chr2 27832777 - Exonic hg38 BRCA TCGA-BH-A0AV-01A 1 9 Out-of-frame Inter-chr q21.2 p23.2 Seq+ 85280 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRB2-SPOCD1 ADGRB2 chr1 31755999 - SPOCD1 chr1 31794235 - Exonic hg38 BRCA TCGA-BH-A0AV-01A 2 3 Out-of-frame Intra-chr p35.2 p35.2 85281 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFR3A-ASAP1 EFR3A chr8 131996497 + ASAP1 chr8 130236994 - Exonic hg38 BRCA TCGA-BH-A0AV-01A 1 3 In-Frame Intra-chr q24.22 q24.22 Seq+ 85282 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO9A-GRAMD2 MYO9A chr15 72117680 - GRAMD2 chr15 72163476 - Exonic hg38 BRCA TCGA-BH-A0AV-01A 1 3 Out-of-frame Intra-chr q23 q23 Seq+ 85283 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED1-ABCC3 MED1 chr17 39447798 - ABCC3 chr17 50655832 + Exonic hg38 BRCA TCGA-BH-A0AW-01A 181 479 In-Frame Intra-chr q12 Tumor suppressor gene q21.33 Seq+ 85284 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDHD2-SNF8 HDHD2 chr18 47150378 - SNF8 chr17 48937124 - Exonic hg38 BRCA TCGA-BH-A0AW-01A 17 92 5'UTR-5'UTR Inter-chr q21.1 q21.32 Seq+ 85285 ChimerSeq TCGA FAWG TCGA_RNA-Seq THRA-B4GALNT2 THRA chr17 40077608 + B4GALNT2 chr17 49159037 + Exonic hg38 BRCA TCGA-BH-A0AW-01A 3 13 In-Frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.32 Seq+ 85286 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXPH5-SLC35F2 EXPH5 chr11 108593418 - SLC35F2 chr11 107815965 - Exonic hg38 BRCA TCGA-BH-A0AY-01A 4 12 In-Frame Intra-chr q22.3 q22.3 Seq+ 85287 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTR3B-TAB2 ACTR3B chr7 152825122 + TAB2 chr6 149369909 + Exonic hg38 BRCA TCGA-BH-A0AY-01A 1 1 5'UTR-5'UTR Inter-chr q36.1 q25.1 85288 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM10-YAP1 RBM10 chrX 47147498 + YAP1 chr11 102209517 + Exonic hg38 BRCA TCGA-BH-A0AY-01A 1 1 Out-of-frame Inter-chr p11.3 q22.1 Tumor suppressor gene 85289 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS41-ANKFN1 VPS41 chr7 38898091 - ANKFN1 chr17 56440327 + Exonic hg38 BRCA TCGA-BH-A0AZ-01A 2 4 Out-of-frame Inter-chr p14.1 q22 Seq+ 85290 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSC2-NPW TSC2 chr16 2050486 + NPW chr16 2020190 + Exonic hg38 BRCA TCGA-BH-A0B1-01A 24 111 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 85291 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHRNB3-RB1CC1 CHRNB3 chr8 42710434 + RB1CC1 chr8 52645867 - Exonic hg38 BRCA TCGA-BH-A0B1-01A 27 64 Out-of-frame Intra-chr p11.21 q11.23 Tumor suppressor gene Seq+ 85292 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13B-PPP1R16A VPS13B chr8 99577633 + PPP1R16A chr8 144496461 + Exonic hg38 BRCA TCGA-BH-A0B1-01A 7 17 CDS-5'UTR Intra-chr q22.2 q24.3 Seq+ 85293 ChimerSeq TCGA FAWG TCGA_RNA-Seq RB1CC1-CHRNB3 RB1CC1 chr8 52714075 - CHRNB3 chr8 42708717 + Exonic hg38 BRCA TCGA-BH-A0B1-01A 4 21 5'UTR-5'UTR Intra-chr q11.23 Tumor suppressor gene p11.21 Seq+ 85294 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP6V1C1-EYA1 ATP6V1C1 chr8 103021225 + EYA1 chr8 71356511 - Exonic hg38 BRCA TCGA-BH-A0B1-01A 2 22 5'UTR-5'UTR Intra-chr q22.3 q13.3 Seq+ 85295 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDM1-ABCC1 MDM1 chr12 68313443 - ABCC1 chr16 16014491 + Exonic hg38 BRCA TCGA-BH-A0B1-01A 4 5 CDS-3'UTR Inter-chr q15 Seq+ 85296 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF423-NOD2 ZNF423 chr16 49730771 - NOD2 chr16 50699488 + Exonic hg38 BRCA TCGA-BH-A0B1-01A 1 7 In-Frame Intra-chr q12.1 Transcription factor q12.1 Seq+ 85297 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM9B-MGP TMEM9B chr11 8956190 - MGP chr12 14883047 - Exonic hg38 BRCA TCGA-BH-A0B1-01A 2 2 Out-of-frame Inter-chr p15.4 p12.3 Seq+ 85298 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPM1-EZR DPM1 chr20 50958363 - EZR chr6 158776504 - Exonic hg38 BRCA TCGA-BH-A0B2-01A 6 35 In-Frame Inter-chr q13.13 q25.3 Seq+ 85299 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOR1-DPM1 NCOR1 chr17 16151946 - DPM1 chr20 50955285 - Exonic hg38 BRCA TCGA-BH-A0B2-01A 6 31 In-Frame Inter-chr p11.2 Oncogene q13.13 Seq+ 85300 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC18-ZC3HAV1 TNRC18 chr7 5423441 - ZC3HAV1 chr7 139084032 - Exonic hg38 BRCA TCGA-BH-A0B2-01A 7 19 5'UTR-CDS Intra-chr p22.1 q34 Seq+ 85301 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R21-WARS2 PPP1R21 chr2 48498735 + WARS2 chr1 119076607 - Exonic hg38 BRCA TCGA-BH-A0B2-01A 2 8 In-Frame Inter-chr p16.3 p12 Seq+ 85302 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSMO1-DDX60 MSMO1 chr4 165327764 + DDX60 chr4 168221881 - Exonic hg38 BRCA TCGA-BH-A0B2-01A 2 6 5'UTR-CDS Intra-chr q32.3 q32.3 Seq+ 85303 ChimerSeq TCGA FAWG TCGA_RNA-Seq LHFPL2-KCNIP1 LHFPL2 chr5 78564813 - KCNIP1 chr5 170718758 + Exonic hg38 BRCA TCGA-BH-A0B3-01A 35 123 5'UTR-5'UTR Intra-chr q14.1 q35.1 Seq+ 85304 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSF1-ADAMTS12 HSF1 chr8 144291874 + ADAMTS12 chr5 33596060 - Exonic hg38 BRCA TCGA-BH-A0B3-01A 20 37 3'UTR-CDS Inter-chr q24.3 Transcription factor p13.2 Seq+ 85305 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOL11-CARD11 NOL11 chr17 67737145 + CARD11 chr7 2939928 - Exonic hg38 BRCA TCGA-BH-A0B3-01A 4 11 In-Frame Inter-chr q24.2 p22.2 Oncogene Seq+ 85306 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASA1-VDAC1 RASA1 chr5 87369900 + VDAC1 chr5 133993018 - Exonic hg38 BRCA TCGA-BH-A0B3-01A 3 14 CDS-5'UTR Intra-chr q14.3 q31.1 Seq+ 85307 ChimerSeq TCGA FAWG TCGA_RNA-Seq GIGYF2-ASB18 GIGYF2 chr2 232703489 + ASB18 chr2 236237956 - Exonic hg38 BRCA TCGA-BH-A0B3-01A 1 12 5'UTR-CDS Intra-chr q37.1 q37.2 85308 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA1-PSD2 NCOA1 chr2 24564430 + PSD2 chr5 139833702 + Exonic hg38 BRCA TCGA-BH-A0B3-01A 1 7 5'UTR-CDS Inter-chr p23.3 Oncogene Transcription factor q31.2 Seq+ 85309 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM3A-RFX8 KDM3A chr2 86466883 + RFX8 chr2 101466900 - Exonic hg38 BRCA TCGA-BH-A0B3-01A 1 5 CDS-5'UTR Intra-chr p11.2 Tumor suppressor gene q11.2 Transcription factor Seq+ 85310 ChimerSeq TCGA FAWG TCGA_RNA-Seq EYA3-SYTL1 EYA3 chr1 28035544 - SYTL1 chr1 27349080 + Exonic hg38 BRCA TCGA-BH-A0B4-01A 3 11 Out-of-frame Intra-chr p35.3 p36.11 Seq+ 85311 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD30A-TACC1P1 ANKRD30A chr10 37173911 + TACC1P1 chr10 37523011 + Exonic hg38 BRCA TCGA-BH-A0B5-01A 41 239 Out-of-frame Intra-chr p11.21 p11.21 85312 ChimerSeq TCGA FAWG TCGA_RNA-Seq G6PD-F8 G6PD chrX 154546036 - F8 chrX 154863227 - Exonic hg38 BRCA TCGA-BH-A0B5-01A 13 20 In-Frame Intra-chr q28 Oncogene q28 Seq+ 85313 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTK2-PPP2R5E PTK2 chr8 140890543 - PPP2R5E chr14 63453885 - Exonic hg38 BRCA TCGA-BH-A0B6-01A 7 22 Out-of-frame Inter-chr q24.3 q23.2 Seq+ 85314 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELMSAN1-ACOT1 ELMSAN1 chr14 73787102 - ACOT1 chr14 73541493 + Exonic hg38 BRCA TCGA-BH-A0B6-01A 2 34 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 85315 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKS1B-NDUFA12 ANKS1B chr12 99655067 - NDUFA12 chr12 94971620 - Exonic hg38 BRCA TCGA-BH-A0B6-01A 6 9 Out-of-frame Intra-chr q23.1 q22 Seq+ 85316 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP9A-LAMA5 ATP9A chr20 51712966 - LAMA5 chr20 62362552 - Exonic hg38 BRCA TCGA-BH-A0B6-01A 1 11 Out-of-frame Intra-chr q13.2 q13.33 85317 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF5B-HPS4 KIF5B chr10 32048464 - HPS4 chr22 26464826 - Exonic hg38 BRCA TCGA-BH-A0B7-01A 34 125 Out-of-frame Inter-chr p11.22 q12.1 Seq+ 85318 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKLE2-SNU13 ANKLE2 chr12 132747832 - SNU13 chr22 41680364 - Exonic hg38 BRCA TCGA-BH-A0B7-01A 32 102 In-Frame Inter-chr q24.33 q13.2 85319 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTSS1-ST3GAL1 MTSS1 chr8 124727884 - ST3GAL1 chr8 133466090 - Exonic hg38 BRCA TCGA-BH-A0B7-01A 23 73 In-Frame Intra-chr q24.13 Tumor suppressor gene q24.22 Seq+ 85320 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL19-CCL11 RPL19 chr17 39200478 + CCL11 chr17 34287096 + Exonic hg38 BRCA TCGA-BH-A0B7-01A 9 42 5'UTR-CDS Intra-chr q12 q12 Seq+ 85321 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2F2-NBEA GTF2F2 chr13 45207505 + NBEA chr13 35349108 + Exonic hg38 BRCA TCGA-BH-A0B7-01A 11 18 In-Frame Intra-chr q14.12 q13.3 Seq+ 85322 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCYL1-FRMD8 SCYL1 chr11 65527117 + FRMD8 chr11 65404864 + Exonic hg38 BRCA TCGA-BH-A0B7-01A 3 37 In-Frame Intra-chr q13.1 Other:SCY1 Tumor suppressor gene q13.1 Seq+ 85323 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNB1-LASP1 CACNB1 chr17 39194884 - LASP1 chr17 38898412 + Exonic hg38 BRCA TCGA-BH-A0B7-01A 3 25 In-Frame Intra-chr q12 q12 Seq+ 85324 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGKV2D-IGKC IGKV2D chr2 89986504 + IGKC chr2 88857681 - Exonic hg38 BRCA TCGA-BH-A0B7-01A 8 2 Out-of-frame Intra-chr p11.2 85325 ChimerSeq TCGA FAWG TCGA_RNA-Seq MZT1-TERF1 MZT1 chr13 72718952 - TERF1 chr8 73026940 + Exonic hg38 BRCA TCGA-BH-A0B7-01A 6 9 In-Frame Inter-chr q21.33 q21.11 Transcription factor Seq+ 85326 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIP4K2B-TMEM132E PIP4K2B chr17 38799266 - TMEM132E chr17 34626127 + Exonic hg38 BRCA TCGA-BH-A0B7-01A 4 14 5'UTR-CDS Intra-chr q12 q12 Seq+ 85327 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEA1-PAH EEA1 chr12 92864860 - PAH chr12 102855332 - Exonic hg38 BRCA TCGA-BH-A0B7-01A 4 10 In-Frame Intra-chr q22 Transcription factor q23.2 Seq+ 85328 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMD12-AS2 SAMD12 chr8 118580715 - AS2 chr8 124060792 - Exonic hg38 BRCA TCGA-BH-A0B7-01A 3 13 Out-of-frame Intra-chr q24.12 85329 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM132E-GPATCH8 TMEM132E chr17 34581143 + GPATCH8 chr17 44424492 - Exonic hg38 BRCA TCGA-BH-A0B7-01A 2 15 Out-of-frame Intra-chr q12 q21.31 Seq+ 85330 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED24-SLC4A1 MED24 chr17 40023131 - SLC4A1 chr17 44251332 - Exonic hg38 BRCA TCGA-BH-A0B7-01A 3 10 In-Frame Intra-chr q21.1 q21.31 Seq+ 85331 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBTF-CACNB1 UBTF chr17 44220740 - CACNB1 chr17 39194970 - Exonic hg38 BRCA TCGA-BH-A0B7-01A 4 5 5'UTR-CDS Intra-chr q21.31 q12 Seq+ 85332 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP21-ASPHD2 ARHGAP21 chr10 24594950 - ASPHD2 chr22 26442459 + Exonic hg38 BRCA TCGA-BH-A0B7-01A 3 7 Out-of-frame Inter-chr p12.1 q12.1 Seq+ 85333 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGAP3-IKZF3 PGAP3 chr17 39684597 - IKZF3 chr17 39832151 - Exonic hg38 BRCA TCGA-BH-A0B7-01A 2 7 Out-of-frame Intra-chr q12 Oncogene q21.1 Tumor suppressor gene Transcription factor Seq+ 85334 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNB1-CDC6 CACNB1 chr17 39194884 - CDC6 chr17 40300828 + Exonic hg38 BRCA TCGA-BH-A0B7-01A 1 2 CDS-3'UTR Intra-chr q12 q21.2 Seq+ 85335 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIP5K1A-MLLT11 PIP5K1A chr1 151199081 + MLLT11 chr1 151067219 + Exonic hg38 BRCA TCGA-BH-A0B9-01A 84 268 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 85336 ChimerSeq TCGA FAWG TCGA_RNA-Seq AARS-COG4 AARS chr16 70282620 - COG4 chr16 70519731 - Exonic hg38 BRCA TCGA-BH-A0B9-01A 46 164 In-Frame Intra-chr q22.1 q22.1 Seq+ 85337 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMMECR1L-SAP130 AMMECR1L chr2 127884203 - SAP130 chr2 127955344 - Exonic hg38 BRCA TCGA-BH-A0B9-01A 50 97 5'UTR-CDS Intra-chr q14.3 q14.3 Seq+ 85338 ChimerSeq TCGA FAWG TCGA_RNA-Seq YARS-ADM5 YARS chr1 32781048 - ADM5 chr19 49689890 + Exonic hg38 BRCA TCGA-BH-A0B9-01A 14 217 Out-of-frame Inter-chr p35.1 q13.33 Seq+ 85339 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDV3-TMEM108 CDV3 chr3 133575115 + TMEM108 chr3 133379752 + Exonic hg38 BRCA TCGA-BH-A0B9-01A 24 124 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 85340 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP3-ACADVL SENP3 chr17 7564590 + ACADVL chr17 7224367 + Exonic hg38 BRCA TCGA-BH-A0B9-01A 13 164 Out-of-frame Intra-chr p13.1 p13.1 85341 ChimerSeq TCGA FAWG TCGA_RNA-Seq AARS-ST3GAL2 AARS chr16 70269618 - ST3GAL2 chr16 70381862 - Exonic hg38 BRCA TCGA-BH-A0B9-01A 23 91 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 85342 ChimerSeq TCGA FAWG TCGA_RNA-Seq PI4K2A-ZDHHC16 PI4K2A chr10 97673735 + ZDHHC16 chr10 97453618 + Exonic hg38 BRCA TCGA-BH-A0B9-01A 16 55 In-Frame Intra-chr q24.2 q24.1 Seq+ 85343 ChimerSeq TCGA FAWG TCGA_RNA-Seq EVA1C-MRAP EVA1C chr21 32495170 + MRAP chr21 32311684 + Exonic hg38 BRCA TCGA-BH-A0B9-01A 16 34 Out-of-frame Intra-chr q22.11 q22.11 Seq+ 85344 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLPB-STARD10 CLPB chr11 72380281 - STARD10 chr11 72793924 - Exonic hg38 BRCA TCGA-BH-A0B9-01A 13 27 CDS-5'UTR Intra-chr q13.4 q13.4 Seq+ 85345 ChimerSeq TCGA FAWG TCGA_RNA-Seq PYGB-ENTPD6 PYGB chr20 25296449 + ENTPD6 chr20 25213263 + Exonic hg38 BRCA TCGA-BH-A0B9-01A 8 34 Out-of-frame Intra-chr p11.21 p11.21 Seq+ 85346 ChimerSeq TCGA FAWG TCGA_RNA-Seq STUB1-RAB11FIP3 STUB1 chr16 682682 + RAB11FIP3 chr16 505524 + Exonic hg38 BRCA TCGA-BH-A0B9-01A 7 38 3'UTR-3'UTR Intra-chr p13.3 Tumor suppressor gene Seq+ 85347 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEF2K-UQCRC2 EEF2K chr16 22264880 + UQCRC2 chr16 21971525 + Exonic hg38 BRCA TCGA-BH-A0B9-01A 7 34 5'UTR-5'UTR Intra-chr p12.2 Seq+ 85348 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARFGAP2-CELF1 ARFGAP2 chr11 47176516 - CELF1 chr11 47487241 - Exonic hg38 BRCA TCGA-BH-A0B9-01A 9 21 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 85349 ChimerSeq TCGA FAWG TCGA_RNA-Seq C11orf84-RTN3 C11orf84 chr11 63819002 + RTN3 chr11 63749991 + Exonic hg38 BRCA TCGA-BH-A0B9-01A 5 23 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 85350 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF607-CAPN12 ZNF607 chr19 37707914 - CAPN12 chr19 38742528 - Exonic hg38 BRCA TCGA-BH-A0B9-01A 3 31 CDS-5'UTR Intra-chr q13.12 Transcription factor q13.2 Seq+ 85351 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM38-SPO11 RBM38 chr20 57393333 + SPO11 chr20 57342729 + Exonic hg38 BRCA TCGA-BH-A0B9-01A 7 12 In-Frame Intra-chr q13.31 Tumor suppressor gene q13.31 Seq+ 85352 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC1-KPNA6 HDAC1 chr1 32324553 + KPNA6 chr1 32154588 + Exonic hg38 BRCA TCGA-BH-A0B9-01A 4 22 In-Frame Intra-chr p35.2 Tumor suppressor gene p35.2 Seq+ 85353 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFTN1-DAZL RFTN1 chr3 16326773 - DAZL chr3 16605311 - Exonic hg38 BRCA TCGA-BH-A0B9-01A 3 26 CDS-5'UTR Intra-chr p24.3 p24.3 Seq+ 85354 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLIP4-TOGARAM2 CLIP4 chr2 29114312 + TOGARAM2 chr2 29003492 + Exonic hg38 BRCA TCGA-BH-A0B9-01A 1 25 5'UTR-CDS Intra-chr p23.2 p23.2 85355 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNNM2-SUFU CNNM2 chr10 102920101 + SUFU chr10 102615268 + Exonic hg38 BRCA TCGA-BH-A0B9-01A 3 13 Out-of-frame Intra-chr q24.32 q24.32 Oncogene Tumor suppressor gene Seq+ 85356 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM9SF2-MTUS2 TM9SF2 chr13 99501777 + MTUS2 chr13 28839778 + Exonic hg38 BRCA TCGA-BH-A0B9-01A 3 11 CDS-5'UTR Intra-chr q32.3 q12.3 85357 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHF-CAT EHF chr11 34646684 + CAT chr11 34464105 + Exonic hg38 BRCA TCGA-BH-A0B9-01A 2 10 In-Frame Intra-chr p13 Tumor suppressor gene Transcription factor p13 Tumor suppressor gene Seq+ 85358 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATN1-LRRC23 ATN1 chr12 6928384 + LRRC23 chr12 6905585 + Exonic hg38 BRCA TCGA-BH-A0B9-01A 2 2 5'UTR-5'UTR Intra-chr p13.31 p13.31 Seq+ 85359 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1429-CAMK2A KIAA1429 chr8 94529070 - CAMK2A chr5 150222713 - Exonic hg38 BRCA TCGA-BH-A0B9-01A 1 5 Out-of-frame Inter-chr q22.1 q32 Seq+ 85360 ChimerSeq TCGA FAWG TCGA_RNA-Seq DMC1-DNAL4 DMC1 chr22 38566590 - DNAL4 chr22 38781009 - Exonic hg38 BRCA TCGA-BH-A0BC-01A 2 11 In-Frame Intra-chr q13.1 q13.1 Seq+ 85361 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-KCTD14 UVRAG chr11 76065788 + KCTD14 chr11 78017270 - Exonic hg38 BRCA TCGA-BH-A0BD-01A 7 33 In-Frame Intra-chr q13.5 Tumor suppressor gene q14.1 Seq+ 85362 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCS-KDM2A CCS chr11 66600549 + KDM2A chr11 67149055 + Exonic hg38 BRCA TCGA-BH-A0BD-01A 7 27 CDS-5'UTR Intra-chr q13.2 q13.2 Transcription factor Seq+ 85363 ChimerSeq TCGA FAWG TCGA_RNA-Seq ORAOV1-RNF169 ORAOV1 chr11 69667895 - RNF169 chr11 74834676 + Exonic hg38 BRCA TCGA-BH-A0BD-01A 1 6 Out-of-frame Intra-chr q13.3 q13.4 85364 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDHX-KDM6A PDHX chr11 34916815 + KDM6A chrX 45107410 + Exonic hg38 BRCA TCGA-BH-A0BF-01A 6 28 Out-of-frame Inter-chr p13 p11.3 Oncogene Tumor suppressor gene Seq+ 85365 ChimerSeq TCGA FAWG TCGA_RNA-Seq COX20-SDCCAG8 COX20 chr1 244842258 + SDCCAG8 chr1 243341039 + Exonic hg38 BRCA TCGA-BH-A0BF-01A 3 31 3'UTR-3'UTR Intra-chr q44 Seq+ 85366 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF21A-CCDC178 PHF21A chr11 46076754 - CCDC178 chr18 33267297 - Exonic hg38 BRCA TCGA-BH-A0BG-01A 13 85 In-Frame Inter-chr p11.2 Transcription factor q12.1 Seq+ 85367 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIX-LRP4 NFIX chr19 13025552 + LRP4 chr11 46902929 - Exonic hg38 BRCA TCGA-BH-A0BG-01A 2 11 In-Frame Inter-chr p13.13 Transcription factor p11.2 Seq+ 85368 ChimerSeq TCGA FAWG TCGA_RNA-Seq NLE1-BAIAP2 NLE1 chr17 35141979 - BAIAP2 chr17 81053668 + Exonic hg38 BRCA TCGA-BH-A0BJ-01A 2 4 In-Frame Intra-chr q12 q25.3 Seq+ 85369 ChimerSeq TCGA FAWG TCGA_RNA-Seq VWF-ZC3H14 VWF chr12 6095460 - ZC3H14 chr14 88574693 + Exonic hg38 BRCA TCGA-BH-A0BJ-01A 1 2 In-Frame Inter-chr p13.31 q31.3 85370 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRIM2-COL21A1 PRIM2 chr6 57382168 + COL21A1 chr6 56064622 - Exonic hg38 BRCA TCGA-BH-A0BL-01A 24 38 In-Frame Intra-chr p11.2 p12.1 Seq+ 85371 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGF2R-SLC22A3 IGF2R chr6 160010785 + SLC22A3 chr6 160397979 + Exonic hg38 BRCA TCGA-BH-A0BL-01A 5 28 In-Frame Intra-chr q25.3 Oncogene Tumor suppressor gene q25.3 Seq+ 85372 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGF2R-ACVR2A IGF2R chr6 159969395 + ACVR2A chr2 147915191 + Exonic hg38 BRCA TCGA-BH-A0BL-01A 10 7 Out-of-frame Inter-chr q25.3 Oncogene Tumor suppressor gene q22.3 Oncogene Seq+ 85373 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASA2-NELFB RASA2 chr3 141559995 + NELFB chr9 137263037 + Exonic hg38 BRCA TCGA-BH-A0BL-01A 8 10 Out-of-frame Inter-chr q23 q34.3 Seq+ 85374 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGPAT3-RPS19 AGPAT3 chr21 43904019 + RPS19 chr19 41860134 + Exonic hg38 BRCA TCGA-BH-A0BL-01A 4 10 5'UTR-5'UTR Inter-chr q22.3 q13.2 Seq+ 85375 ChimerSeq TCGA FAWG TCGA_RNA-Seq CGGBP1-SCN11A CGGBP1 chr3 88140970 - SCN11A chr3 38926931 - Exonic hg38 BRCA TCGA-BH-A0BL-01A 3 11 5'UTR-CDS Intra-chr p11.1 Transcription factor p22.2 Seq+ 85376 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A9-PLEKHD1 SLC39A9 chr14 69399465 + PLEKHD1 chr14 69500115 + Exonic hg38 BRCA TCGA-BH-A0BL-01A 1 12 Out-of-frame Intra-chr q24.1 q24.1 85377 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R5D-ASCC3 PPP2R5D chr6 42989688 + ASCC3 chr6 100767345 - Exonic hg38 BRCA TCGA-BH-A0BO-01A 3 6 In-Frame Intra-chr p21.1 q16.3 Seq+ 85378 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF3C4-LMX1B GTF3C4 chr9 132683693 + LMX1B chr9 126690836 + Exonic hg38 BRCA TCGA-BH-A0BP-01A 26 86 In-Frame Intra-chr q34.13 q33.3 Transcription factor Seq+ 85379 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD1-MESP1 BTBD1 chr15 83041728 - MESP1 chr15 89750227 - Exonic hg38 BRCA TCGA-BH-A0BP-01A 10 52 Out-of-frame Intra-chr q25.2 q26.1 Transcription factor Seq+ 85380 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALCAM-YIF1B ALCAM chr3 105367481 + YIF1B chr19 38309643 - Exonic hg38 BRCA TCGA-BH-A0BP-01A 9 31 In-Frame Inter-chr q13.11 q13.2 Seq+ 85381 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAMP1-MLPH RAMP1 chr2 237911600 + MLPH chr2 237546606 + Exonic hg38 BRCA TCGA-BH-A0BP-01A 4 31 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 85382 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIRT6-CERS4 SIRT6 chr19 4175680 - CERS4 chr19 8251076 + Exonic hg38 BRCA TCGA-BH-A0BP-01A 5 20 CDS-5'UTR Intra-chr p13.3 Tumor suppressor gene p13.2 Seq+ 85383 ChimerSeq TCGA FAWG TCGA_RNA-Seq TYK2-SHC2 TYK2 chr19 10357764 - SHC2 chr19 430747 - Exonic hg38 BRCA TCGA-BH-A0BP-01A 3 13 In-Frame Intra-chr p13.2 TK:JakA p13.3 Seq+ 85384 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS17-PCDHA13 ADAMTS17 chr15 100330889 - PCDHA13 chr5 140978949 + Exonic hg38 BRCA TCGA-BH-A0BP-01A 4 6 Out-of-frame Inter-chr q26.3 q31.3 Seq+ 85385 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS17-PCDHAC1 ADAMTS17 chr15 100330889 - PCDHAC1 chr5 140978949 + Exonic hg38 BRCA TCGA-BH-A0BP-01A 4 6 Out-of-frame Inter-chr q26.3 q31.3 Seq+ 85386 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS17-PCDHAC2 ADAMTS17 chr15 100330889 - PCDHAC2 chr5 140978949 + Exonic hg38 BRCA TCGA-BH-A0BP-01A 4 6 Out-of-frame Inter-chr q26.3 q31.3 Seq+ 85387 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNC45A-SV2B UNC45A chr15 90943082 + SV2B chr15 91266582 + Exonic hg38 BRCA TCGA-BH-A0BP-01A 5 2 Out-of-frame Intra-chr q26.1 q26.1 Seq+ 85388 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC28-MEF2A LRRC28 chr15 99334129 + MEF2A chr15 99645561 + Exonic hg38 BRCA TCGA-BH-A0BP-01A 4 5 Out-of-frame Intra-chr q26.3 q26.3 Transcription factor Seq+ 85389 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB45-ZFR2 ZBTB45 chr19 58516395 - ZFR2 chr19 3823403 - Exonic hg38 BRCA TCGA-BH-A0BP-01A 3 9 In-Frame Intra-chr q13.43 Transcription factor p13.3 Seq+ 85390 ChimerSeq TCGA FAWG TCGA_RNA-Seq PNPO-NPEPPS PNPO chr17 47943430 + NPEPPS chr17 47591956 + Exonic hg38 BRCA TCGA-BH-A0BP-01A 1 13 Out-of-frame Intra-chr q21.32 q21.32 Seq+ 85391 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS4-SLC9A8 BCAS4 chr20 50830380 + SLC9A8 chr20 49877981 + Exonic hg38 BRCA TCGA-BH-A0BP-01A 1 4 Out-of-frame Intra-chr q13.13 q13.13 Seq+ 85392 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD23A-RNASEH2A RAD23A chr19 12949408 + RNASEH2A chr19 12807008 + Exonic hg38 BRCA TCGA-BH-A0BP-01A 1 4 Out-of-frame Intra-chr p13.13 p13.13 85393 ChimerSeq TCGA FAWG TCGA_RNA-Seq UQCRFS1-PQLC2L UQCRFS1 chr19 29212905 - PQLC2L chr3 157677525 + Exonic hg38 BRCA TCGA-BH-A0BR-01A 10 120 Out-of-frame Inter-chr q12 q25.32 85394 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXP1-RGAG4 FOXP1 chr3 71493426 - RGAG4 chrX 72127710 - Exonic hg38 BRCA TCGA-BH-A0BR-01A 21 75 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 85395 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARCH2-OR7G2 2019_ 3_ 2_ chr19 8430867 + OR7G2 chr19 9103259 - Exonic hg38 BRCA TCGA-BH-A0BR-01A 28 43 Out-of-frame Intra-chr p13.2 p13.2 85396 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP1M1-ZNF93 AP1M1 chr19 16209177 + ZNF93 chr19 19933182 + Exonic hg38 BRCA TCGA-BH-A0BR-01A 18 43 Out-of-frame Intra-chr p13.11 p12 Transcription factor Seq+ 85397 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D9-CORO1C TBC1D9 chr4 140670720 - CORO1C chr12 108678394 - Exonic hg38 BRCA TCGA-BH-A0BR-01A 14 38 In-Frame Inter-chr q31.21 q24.11 Seq+ 85398 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBFA-TXNL4A RBFA chr18 80038617 + TXNL4A chr18 80030577 - Exonic hg38 BRCA TCGA-BH-A0BR-01A 7 11 CDS-5'UTR Intra-chr q23 q23 Seq+ 85399 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D9-SMARCA5 TBC1D9 chr4 140639086 - SMARCA5 chr4 143517355 + Exonic hg38 BRCA TCGA-BH-A0BR-01A 3 14 In-Frame Intra-chr q31.21 q31.21 Seq+ 85400 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFA7-SH2D3A NDUFA7 chr19 8316496 - SH2D3A chr19 6754932 - Exonic hg38 BRCA TCGA-BH-A0BR-01A 1 13 Out-of-frame Intra-chr p13.2 p13.3 Seq+ 85401 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A53-NXF3 SLC25A53 chrX 104156878 - NXF3 chrX 103084495 - Exonic hg38 BRCA TCGA-BH-A0BR-01A 2 4 5'UTR-CDS Intra-chr q22.2 q22.1 85402 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL7-FAM134B FBXL7 chr5 15500713 + FAM134B chr5 16483472 - Exonic hg38 BRCA TCGA-BH-A0BS-01A 1 1 Out-of-frame Intra-chr p15.1 85403 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF98-NDUFA7 ZNF98 chr19 22532339 - NDUFA7 chr19 8311595 - Exonic hg38 BRCA TCGA-BH-A0BT-01A 3 29 5'UTR-CDS Intra-chr p12 Transcription factor p13.2 85404 ChimerSeq TCGA FAWG TCGA_RNA-Seq PACS1-ZDHHC24 PACS1 chr11 66070842 + ZDHHC24 chr11 66543981 - Exonic hg38 BRCA TCGA-BH-A0BV-01A 1 3 In-Frame Intra-chr q13.1 q13.2 Seq+ 85405 ChimerSeq TCGA FAWG TCGA_RNA-Seq UCK2-DHX9 UCK2 chr1 165905969 + DHX9 chr1 182881264 + Exonic hg38 BRCA TCGA-BH-A0BW-01A 2 11 CDS-5'UTR Intra-chr q24.1 q25.3 Seq+ 85406 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1orf198-GXYLT2 C1orf198 chr1 230868812 - GXYLT2 chr3 72908367 + Exonic hg38 BRCA TCGA-BH-A0BW-01A 2 3 5'UTR-5'UTR Inter-chr q42.2 p13 Seq+ 85407 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS23-VEZF1 MRPS23 chr17 57849240 - VEZF1 chr17 57974900 - Exonic hg38 BRCA TCGA-BH-A0BZ-01A 10 60 Out-of-frame Intra-chr q22 q22 Transcription factor Seq+ 85408 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRCC-HAPLN2 PRCC chr1 156768239 + HAPLN2 chr1 156623467 + Exonic hg38 BRCA TCGA-BH-A0BZ-01A 11 28 CDS-5'UTR Intra-chr q23.1 q23.1 Seq+ 85409 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLE-GOLGA3 POLE chr12 132672215 - GOLGA3 chr12 132784307 - Exonic hg38 BRCA TCGA-BH-A0BZ-01A 7 10 In-Frame Intra-chr q24.33 q24.33 Seq+ 85410 ChimerSeq TCGA FAWG TCGA_RNA-Seq FLAD1-UBAP2L FLAD1 chr1 154983397 + UBAP2L chr1 154227282 + Exonic hg38 BRCA TCGA-BH-A0BZ-01A 6 5 5'UTR-CDS Intra-chr q21.3 q21.3 Seq+ 85411 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNRG-CCR7 SYNRG chr17 37561195 - CCR7 chr17 40558942 - Exonic hg38 BRCA TCGA-BH-A0BZ-01A 2 14 5'UTR-5'UTR Intra-chr q21.2 Seq+ 85412 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO38-SPINK6 FBXO38 chr5 148417204 + SPINK6 chr5 148203021 + Exonic hg38 BRCA TCGA-BH-A0BZ-01A 3 7 CDS-5'UTR Intra-chr q32 q32 Seq+ 85413 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFTN1-DAZL RFTN1 chr3 16409375 - DAZL chr3 16594583 - Exonic hg38 BRCA TCGA-BH-A0BZ-01A 2 3 In-Frame Intra-chr p24.3 p24.3 Seq+ 85414 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOL10-PDIA6 NOL10 chr2 10654481 - PDIA6 chr2 10787439 - Exonic hg38 BRCA TCGA-BH-A0BZ-01A 1 5 Out-of-frame Intra-chr p25.1 p25.1 85415 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGPAT2-CDC42SE1 AGPAT2 chr9 136676961 - CDC42SE1 chr1 151055126 - Exonic hg38 BRCA TCGA-BH-A0C0-01A 27 51 In-Frame Inter-chr q34.3 q21.3 Seq+ 85416 ChimerSeq TCGA FAWG TCGA_RNA-Seq MROH1-ARMC2 MROH1 chr8 144223230 + ARMC2 chr6 108868824 + Exonic hg38 BRCA TCGA-BH-A0C0-01A 7 6 In-Frame Inter-chr q24.3 q21 Seq+ 85417 ChimerSeq TCGA FAWG TCGA_RNA-Seq SF1-ITPR1 SF1 chr11 64776498 - ITPR1 chr3 4627763 + Exonic hg38 BRCA TCGA-BH-A0C0-01A 4 9 In-Frame Inter-chr q13.1 p26.1 Seq+ 85418 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAU2-OC90 STAU2 chr8 73738284 - OC90 chr8 132045883 - Exonic hg38 BRCA TCGA-BH-A0C0-01A 1 17 Out-of-frame Intra-chr q21.11 q24.22 85419 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2J2-ACAP3 UBE2J2 chr1 1262170 - ACAP3 chr1 1302046 - Exonic hg38 BRCA TCGA-BH-A0C0-01A 1 17 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 85420 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCM5-RALGAPB MCM5 chr22 35403542 + RALGAPB chr20 38553867 + Exonic hg38 BRCA TCGA-BH-A0C0-01A 2 11 In-Frame Inter-chr q12.3 q11.23 Seq+ 85421 ChimerSeq TCGA FAWG TCGA_RNA-Seq DEGS2-WARS DEGS2 chr14 100159506 - WARS chr14 100343387 - Exonic hg38 BRCA TCGA-BH-A0C0-01A 3 4 In-Frame Intra-chr q32.2 q32.2 Seq+ 85422 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO6-IBTK MYO6 chr6 75915060 + IBTK chr6 82225647 - Exonic hg38 BRCA TCGA-BH-A0C0-01A 3 3 5'UTR-5'UTR Intra-chr q14.1 Seq+ 85423 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTK7-PTCRA PTK7 chr6 43146698 + PTCRA chr6 42923027 + Exonic hg38 BRCA TCGA-BH-A0C0-01A 2 4 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 85424 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCTN2-USP15 DCTN2 chr12 57547028 - USP15 chr12 62294179 + Exonic hg38 BRCA TCGA-BH-A0C1-01B 2 12 Out-of-frame Intra-chr q13.3 q14.1 Seq+ 85425 ChimerSeq TCGA FAWG TCGA_RNA-Seq BOLA2B-BCAR4 BOLA2B chr16 30193358 - BCAR4 chr16 11820297 - Exonic hg38 BRCA TCGA-BH-A0C1-01B 1 15 CDS-3'UTR Intra-chr p11.2 p13.13 85426 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-LRP5 PPFIA1 chr11 70376600 + LRP5 chr11 68411436 + Exonic hg38 BRCA TCGA-BH-A0C3-01A 17 25 Out-of-frame Intra-chr q13.3 q13.2 Seq+ 85427 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKAP1-ABCC11 SKAP1 chr17 48345905 - ABCC11 chr16 48177113 - Exonic hg38 BRCA TCGA-BH-A0C3-01A 3 35 Out-of-frame Inter-chr q21.32 q12.1 Seq+ 85428 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4K2-NETO2 MAP4K2 chr11 64799421 - NETO2 chr16 47086339 - Exonic hg38 BRCA TCGA-BH-A0C3-01A 1 6 Out-of-frame Inter-chr q13.1 q12.1 Seq+ 85429 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-XRRA1 PPFIA1 chr11 70362488 + XRRA1 chr11 74937068 - Exonic hg38 BRCA TCGA-BH-A0C3-01A 1 3 Out-of-frame Intra-chr q13.3 q13.4 Seq+ 85430 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPC1-PTGR2 EPC1 chr10 32346763 - PTGR2 chr14 73874023 + Exonic hg38 BRCA TCGA-BH-A0C7-01B 75 167 In-Frame Inter-chr p11.22 q24.3 Seq+ 85431 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIP12-SLC4A10 TRIP12 chr2 229836848 - SLC4A10 chr2 161964135 + Exonic hg38 BRCA TCGA-BH-A0C7-01B 2 86 Out-of-frame Intra-chr q36.3 q24.2 Seq+ 85432 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAM2-THSD7B STAM2 chr2 152126226 - THSD7B chr2 137056420 + Exonic hg38 BRCA TCGA-BH-A0C7-01B 12 19 Out-of-frame Intra-chr q23.3 q22.1 Seq+ 85433 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD13-TNFRSF8 STARD13 chr13 33285470 - TNFRSF8 chr1 12109566 + Exonic hg38 BRCA TCGA-BH-A0C7-01B 2 19 In-Frame Inter-chr q13.1 Tumor suppressor gene p36.22 Seq+ 85434 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLASP1-HK2 CLASP1 chr2 121447337 - HK2 chr2 74854293 + Exonic hg38 BRCA TCGA-BH-A0C7-01B 1 2 Out-of-frame Intra-chr q14.3 p12 85435 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1H-C12orf56 PPM1H chr12 62667178 - C12orf56 chr12 64277803 - Exonic hg38 BRCA TCGA-BH-A0DD-01A 6 71 In-Frame Intra-chr q14.2 q14.2 Seq+ 85436 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND1B-CCSER1 DENND1B chr1 197772868 - CCSER1 chr4 90815762 + Exonic hg38 BRCA TCGA-BH-A0DD-01A 9 55 Out-of-frame Inter-chr q31.3 q22.1 Seq+ 85437 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP22-MYO19 USP22 chr17 21042665 - MYO19 chr17 36496406 - Exonic hg38 BRCA TCGA-BH-A0DD-01A 8 34 CDS-5'UTR Intra-chr p11.2 q12 Seq+ 85438 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO18A-SERGEF MYO18A chr17 29165942 - SERGEF chr11 17878244 - Exonic hg38 BRCA TCGA-BH-A0DD-01A 6 8 In-Frame Inter-chr q11.2 Oncogene p15.1 Seq+ 85439 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACACA-FAM104A ACACA chr17 37274193 - FAM104A chr17 73209768 - Exonic hg38 BRCA TCGA-BH-A0DD-01A 2 16 5'UTR-CDS Intra-chr q25.1 Seq+ 85440 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIPK3-TOLLIP HIPK3 chr11 33257889 + TOLLIP chr11 1295794 - Exonic hg38 BRCA TCGA-BH-A0DD-01A 2 10 5'UTR-5'UTR Intra-chr p13 CMGC:DYRK p15.5 Seq+ 85441 ChimerSeq TCGA FAWG TCGA_RNA-Seq PXDNL-MSI2 PXDNL chr8 51809181 - MSI2 chr17 57652099 + Exonic hg38 BRCA TCGA-BH-A0DD-01A 2 7 Out-of-frame Inter-chr q11.23 q22 Seq+ 85442 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPOP-VMP1 SPOP chr17 49601865 - VMP1 chr17 59731421 + Exonic hg38 BRCA TCGA-BH-A0DD-01A 1 7 CDS-5'UTR Intra-chr q21.33 Oncogene Tumor suppressor gene q23.1 85443 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT9-NARF SEPT9 chr17 77307197 + NARF chr17 82472564 + Exonic hg38 BRCA TCGA-BH-A0DG-01A 40 113 Out-of-frame Intra-chr q25.3 Seq+ 85444 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRP68-LPO SRP68 chr17 76040419 - LPO chr17 58250415 + Exonic hg38 BRCA TCGA-BH-A0DG-01A 15 81 In-Frame Intra-chr q25.1 q22 Seq+ 85445 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-VMP1 BCAS3 chr17 60709325 + VMP1 chr17 59842082 + Exonic hg38 BRCA TCGA-BH-A0DG-01A 4 123 CDS-3'UTR Intra-chr q23.2 q23.1 Seq+ 85446 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP32-PGS1 USP32 chr17 60252381 - PGS1 chr17 78419546 + Exonic hg38 BRCA TCGA-BH-A0DG-01A 4 17 Out-of-frame Intra-chr q23.2 q25.3 Seq+ 85447 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHG4B-MXI1 PLEKHG4B chr5 113448 + MXI1 chr10 110279914 + Exonic hg38 BRCA TCGA-BH-A0DG-01A 4 4 In-Frame Inter-chr p15.33 q25.2 Tumor suppressor gene Transcription factor 85448 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM117A-VMP1 FAM117A chr17 49763892 - VMP1 chr17 59731421 + Exonic hg38 BRCA TCGA-BH-A0DG-01A 2 9 CDS-5'UTR Intra-chr q21.33 q23.1 Seq+ 85449 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1XR1-AS3 TBL1XR1 chr3 177197121 - AS3 chr3 175112591 - Exonic hg38 BRCA TCGA-BH-A0DI-01A 8 15 Out-of-frame Intra-chr q26.32 Tumor suppressor gene 85450 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2C-CNTNAP2 KMT2C chr7 152330601 - CNTNAP2 chr7 147043907 + Exonic hg38 BRCA TCGA-BH-A0DI-01A 1 6 CDS-3'UTR Intra-chr q36.1 Oncogene Tumor suppressor gene Tumor suppressor gene 85451 ChimerSeq TCGA FAWG TCGA_RNA-Seq NXPH3-KAT7 NXPH3 chr17 49576273 + KAT7 chr17 49796750 + Exonic hg38 BRCA TCGA-BH-A0DK-01A 1 2 Out-of-frame Intra-chr q21.33 q21.33 Transcription factor 85452 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBBP4-ZMYM4 RBBP4 chr1 32668398 + ZMYM4 chr1 35398413 + Exonic hg38 BRCA TCGA-BH-A0DK-01A 1 1 In-Frame Intra-chr p35.1 p34.3 85453 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFP91-AS2 ZFP91 chr11 58584884 + AS2 chr11 70072939 - Exonic hg38 BRCA TCGA-BH-A0DL-01A 32 103 Out-of-frame Intra-chr q12.1 Transcription factor 85454 ChimerSeq TCGA FAWG TCGA_RNA-Seq RYK-RABL3 RYK chr3 134195082 - RABL3 chr3 120698573 - Exonic hg38 BRCA TCGA-BH-A0DL-01A 7 37 Out-of-frame Intra-chr q22.2 TK:Ryk q13.33 Seq+ 85455 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTN1-SCGN ACTN1 chr14 68877082 - SCGN chr6 25691056 + Exonic hg38 BRCA TCGA-BH-A0DQ-01A 10 26 In-Frame Inter-chr q24.1 p22.2 Seq+ 85456 ChimerSeq TCGA FAWG TCGA_RNA-Seq DRAIC-CORO2B DRAIC chr15 69570904 + CORO2B chr15 68725843 + Exonic hg38 BRCA TCGA-BH-A0DS-01A 12 15 5'UTR-CDS Intra-chr q23 q23 85457 ChimerSeq TCGA FAWG TCGA_RNA-Seq ODF2-SLC2A8 ODF2 chr9 128488025 + SLC2A8 chr9 127407436 + Exonic hg38 BRCA TCGA-BH-A0DS-01A 7 14 CDS-5'UTR Intra-chr q34.11 q33.3 Seq+ 85458 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS37C-FADS3 VPS37C chr11 61161391 - FADS3 chr11 61880151 - Exonic hg38 BRCA TCGA-BH-A0DS-01A 5 6 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 85459 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUPT4H1-SEPT4 SUPT4H1 chr17 58352067 - SEPT4 chr17 58526313 - Exonic hg38 BRCA TCGA-BH-A0DX-01A 19 90 Out-of-frame Intra-chr q22 q22 Tumor suppressor gene Seq+ 85460 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUGP2-BORCS8 SUGP2 chr19 19004168 - BORCS8 chr19 19187005 - Exonic hg38 BRCA TCGA-BH-A0DX-01A 6 37 In-Frame Intra-chr p13.11 p13.11 85461 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHMP3-RNF103 CHMP3 chr2 86542252 - RNF103 chr2 86612274 - Exonic hg38 BRCA TCGA-BH-A0DX-01A 4 21 Out-of-frame Intra-chr p11.2 p11.2 85462 ChimerSeq TCGA FAWG TCGA_RNA-Seq ICMT-GPR153 ICMT chr1 6233474 - GPR153 chr1 6255014 - Exonic hg38 BRCA TCGA-BH-A0DX-01A 4 15 CDS-5'UTR Intra-chr p36.31 p36.31 Seq+ 85463 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAF1-PTRH2 FAF1 chr1 50655442 - PTRH2 chr17 59697978 - Exonic hg38 BRCA TCGA-BH-A0DX-01A 4 13 In-Frame Inter-chr p32.3 q23.1 Seq+ 85464 ChimerSeq TCGA FAWG TCGA_RNA-Seq SACM1L-ROBO2 SACM1L chr3 45689497 + ROBO2 chr3 75937481 + Exonic hg38 BRCA TCGA-BH-A0DX-01A 2 4 5'UTR-5'UTR Intra-chr p21.31 p12.3 85465 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK11IP-S100A16 STK11IP chr2 219608316 + S100A16 chr1 153608123 - Exonic hg38 BRCA TCGA-BH-A0DZ-01A 3 1 Out-of-frame Inter-chr q35 q21.3 Seq+ 85466 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK1-CCL2 TAOK1 chr17 29530619 + CCL2 chr17 34256222 + Exonic hg38 BRCA TCGA-BH-A0DZ-01A 1 8 Out-of-frame Intra-chr q11.2 q12 Seq+ 85467 ChimerSeq TCGA FAWG TCGA_RNA-Seq PMM2-PPP2R3C PMM2 chr16 8806407 + PPP2R3C chr14 35091207 - Exonic hg38 BRCA TCGA-BH-A0DZ-01A 2 1 Out-of-frame Inter-chr p13.2 q13.2 Seq+ 85468 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP32-MAP3K3 USP32 chr17 60345481 - MAP3K3 chr17 63693549 + Exonic hg38 BRCA TCGA-BH-A0DZ-01A 1 4 Out-of-frame Intra-chr q23.2 q23.3 STE:STE11 85469 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERC1-AFDN ERC1 chr12 1444750 + AFDN chr6 167965757 + Exonic hg38 BRCA TCGA-BH-A0DZ-01A 1 1 In-Frame Inter-chr q27 85470 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF615-FAM174B ZNF615 chr19 52008141 - FAM174B chr15 92630345 - Exonic hg38 BRCA TCGA-BH-A0DZ-01A 1 1 Out-of-frame Inter-chr q13.41 Transcription factor q26.1 85471 ChimerSeq TCGA FAWG TCGA_RNA-Seq BOP1-CYHR1 BOP1 chr8 144289095 - CYHR1 chr8 144465096 - Exonic hg38 BRCA TCGA-BH-A0E0-01A 2 7 CDS-5'UTR Intra-chr q24.3 q24.3 Seq+ 85472 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPRIN1-COMMD9 CAPRIN1 chr11 34083041 + COMMD9 chr11 36276240 - Exonic hg38 BRCA TCGA-BH-A0E2-01A 8 23 Out-of-frame Intra-chr p13 p13 Seq+ 85473 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL8-RAB3IP OSBPL8 chr12 76559397 - RAB3IP chr12 69784720 + Exonic hg38 BRCA TCGA-BH-A0E2-01A 1 9 5'UTR-5'UTR Intra-chr q21.2 q15 Seq+ 85474 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB12-FAM19A2 RAB12 chr18 8624998 + FAM19A2 chr12 61867426 - Exonic hg38 BRCA TCGA-BH-A0E2-01A 1 7 Out-of-frame Inter-chr p11.22 q14.1 Seq+ 85475 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRPPRC-NRXN1 LRPPRC chr2 43925067 - NRXN1 chr2 50925955 - Exonic hg38 BRCA TCGA-BH-A0E2-01A 1 3 In-Frame Intra-chr p21 p16.3 85476 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF880-ATOH8 ZNF880 chr19 52369977 + ATOH8 chr2 85786885 + Exonic hg38 BRCA TCGA-BH-A0E2-01A 1 2 In-Frame Inter-chr q13.41 Transcription factor p11.2 Transcription factor 85477 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASC4-TGM5 CASC4 chr15 44338317 + TGM5 chr15 43240990 - Exonic hg38 BRCA TCGA-BH-A0E6-01A 4 25 In-Frame Intra-chr q15.3 q15.2 Seq+ 85478 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSF1-TENM4 RSF1 chr11 77725545 - TENM4 chr11 78856178 - Exonic hg38 BRCA TCGA-BH-A0EB-01A 1 5 In-Frame Intra-chr q14.1 q14.1 Seq+ 85479 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETDB2-ERH SETDB2 chr13 49467960 + ERH chr14 69380640 - Exonic hg38 BRCA TCGA-BH-A0EE-01A 66 360 In-Frame Inter-chr q14.2 Transcription factor q24.1 Seq+ 85480 ChimerSeq TCGA FAWG TCGA_RNA-Seq KPNA3-FLJ22447 KPNA3 chr13 49792438 - FLJ22447 chr14 61650962 + Exonic hg38 BRCA TCGA-BH-A0EE-01A 16 42 CDS-5'UTR Inter-chr q14.2 q23.1 Seq+ 85481 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOPEY2-TRPM2 DOPEY2 chr21 36164871 + TRPM2 chr21 44405142 + Exonic hg38 BRCA TCGA-BH-A0EE-01A 14 22 Out-of-frame Intra-chr q22.12 q22.3 Tumor suppressor gene Seq+ 85482 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGCR2-DESI1 DGCR2 chr22 19041058 - DESI1 chr22 41607861 - Exonic hg38 BRCA TCGA-BH-A0EE-01A 7 42 In-Frame Intra-chr q11.21 q13.2 Seq+ 85483 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-RHBDF2 FBXL20 chr17 39298990 - RHBDF2 chr17 76487909 - Exonic hg38 BRCA TCGA-BH-A0EE-01A 6 11 CDS-5'UTR Intra-chr q12 q25.1 Seq+ 85484 ChimerSeq TCGA FAWG TCGA_RNA-Seq HLCS-SLC37A1 HLCS chr21 36896860 - SLC37A1 chr21 42543436 + Exonic hg38 BRCA TCGA-BH-A0EE-01A 1 3 In-Frame Intra-chr q22.13 q22.3 85485 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB11FIP1-HTRA4 RAB11FIP1 chr8 37870420 - HTRA4 chr8 38979215 + Exonic hg38 BRCA TCGA-BH-A0EI-01A 33 124 In-Frame Intra-chr p11.23 p11.22 Seq+ 85486 ChimerSeq TCGA FAWG TCGA_RNA-Seq LSM1-NSD3 LSM1 chr8 38169802 - NSD3 chr8 38348215 - Exonic hg38 BRCA TCGA-BH-A0EI-01A 9 25 CDS-5'UTR Intra-chr p11.23 p11.23 Tumor suppressor gene 85487 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR1-ADGRA2 FGFR1 chr8 38457356 - ADGRA2 chr8 37814896 + Exonic hg38 BRCA TCGA-BH-A0EI-01A 3 11 Out-of-frame Intra-chr p11.23 TK:FGFR Oncogene p11.23 Oncogene 85488 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF160-ADAM5 ZNF160 chr19 53091637 - ADAM5 chr8 39417214 + Exonic hg38 BRCA TCGA-BH-A0GY-01A 10 211 5'UTR-3'UTR Inter-chr q13.42 Transcription factor p11.22 Seq+ 85489 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTSZ-ZHX3 CTSZ chr20 58996639 - ZHX3 chr20 41185201 - Exonic hg38 BRCA TCGA-BH-A0GY-01A 2 53 Out-of-frame Intra-chr q13.32 q12 Transcription factor Seq+ 85490 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP3-THAP8 LRP3 chr19 33202986 + THAP8 chr19 36040136 - Exonic hg38 BRCA TCGA-BH-A0GY-01A 4 21 In-Frame Intra-chr q13.11 q13.12 Transcription factor Seq+ 85491 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGSF3-MAN1A2 IGSF3 chr1 116666284 - MAN1A2 chr1 117402186 + Exonic hg38 BRCA TCGA-BH-A0GY-01A 2 11 Out-of-frame Intra-chr p13.1 p12 Seq+ 85492 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTGFRN-AGBL4 PTGFRN chr1 116949572 + AGBL4 chr1 49697437 - Exonic hg38 BRCA TCGA-BH-A0GY-01A 1 15 In-Frame Intra-chr p13.1 p33 Seq+ 85493 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEGF8-PRR19 MEGF8 chr19 42351761 + PRR19 chr19 42310271 + Exonic hg38 BRCA TCGA-BH-A0H0-01A 5 79 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 85494 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRR19-PPP1R37 PRR19 chr19 42302503 + PPP1R37 chr19 45138514 + Exonic hg38 BRCA TCGA-BH-A0H0-01A 16 21 5'UTR-CDS Intra-chr q13.2 q13.32 Seq+ 85495 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNAI3-CTTNBP2NL GNAI3 chr1 109579361 + CTTNBP2NL chr1 112412194 + Exonic hg38 BRCA TCGA-BH-A0H0-01A 2 3 CDS-5'UTR Intra-chr p13.3 p13.2 85496 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARFGEF2-CNIH2 ARFGEF2 chr20 48941987 + CNIH2 chr11 66282259 + Exonic hg38 BRCA TCGA-BH-A0H6-01A 15 50 In-Frame Inter-chr q13.13 q13.2 Seq+ 85497 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB1B-ARFGEF2 RAB1B chr11 66275935 + ARFGEF2 chr20 48951323 + Exonic hg38 BRCA TCGA-BH-A0H6-01A 3 7 In-Frame Inter-chr q13.2 q13.13 Seq+ 85498 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN10-APPL1 ATXN10 chr22 45740538 + APPL1 chr3 57246076 + Exonic hg38 BRCA TCGA-BH-A0H7-01A 9 76 In-Frame Inter-chr q13.31 p14.3 Seq+ 85499 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRELID3B-PTPRT PRELID3B chr20 59042699 - PTPRT chr20 42885932 - Exonic hg38 BRCA TCGA-BH-A0H7-01A 1 33 Out-of-frame Intra-chr q13.32 q13.11 Oncogene Tumor suppressor gene 85500 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF4-LARGE1 TAF4 chr20 62010046 - LARGE1 chr22 33856802 - Exonic hg38 BRCA TCGA-BH-A0H7-01A 4 20 5'UTR-5'UTR Inter-chr q12.3 85501 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNIP1-ACSL6 FNIP1 chr5 131796830 - ACSL6 chr5 131994251 - Exonic hg38 BRCA TCGA-BH-A0H7-01A 3 19 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 85502 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC40-ANAPC11 CCDC40 chr17 80038186 + ANAPC11 chr17 81899920 + Exonic hg38 BRCA TCGA-BH-A0H7-01A 4 10 In-Frame Intra-chr q25.3 q25.3 85503 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAG1-ZNF589 DAG1 chr3 49470433 + ZNF589 chr3 48260813 + Exonic hg38 BRCA TCGA-BH-A0H7-01A 3 13 5'UTR-CDS Intra-chr p21.31 p21.31 Transcription factor Seq+ 85504 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM83D-SPECC1L FAM83D chr20 38926925 + SPECC1L chr22 24313313 + Exonic hg38 BRCA TCGA-BH-A0H7-01A 4 9 In-Frame Inter-chr q11.23 q11.23 Seq+ 85505 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITCH-TAB1 ITCH chr20 34369470 + TAB1 chr22 39415006 + Exonic hg38 BRCA TCGA-BH-A0H7-01A 5 4 5'UTR-CDS Inter-chr q11.22 q13.1 Seq+ 85506 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBFOX2-NTSR1 RBFOX2 chr22 36028240 - NTSR1 chr20 62754685 + Exonic hg38 BRCA TCGA-BH-A0H7-01A 3 11 5'UTR-CDS Inter-chr q13.33 Seq+ 85507 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB10-ARHGAP39 RAB10 chr2 26034735 + ARHGAP39 chr8 144555643 - Exonic hg38 BRCA TCGA-BH-A0H7-01A 2 10 Out-of-frame Inter-chr p23.3 q24.3 85508 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNIP2-LRBA FNIP2 chr4 158769319 + LRBA chr4 150321383 - Exonic hg38 BRCA TCGA-BH-A0H7-01A 2 8 Out-of-frame Intra-chr q32.1 q31.3 Seq+ 85509 ChimerSeq TCGA FAWG TCGA_RNA-Seq AURKA-GATSL3 AURKA chr20 56392154 - GATSL3 chr22 30288776 - Exonic hg38 BRCA TCGA-BH-A0H7-01A 1 11 Out-of-frame Inter-chr q13.2 Oncogene 85510 ChimerSeq TCGA FAWG TCGA_RNA-Seq COMT-CERK COMT chr22 19961289 + CERK chr22 46699465 - Exonic hg38 BRCA TCGA-BH-A0H7-01A 1 4 5'UTR-CDS Intra-chr q11.21 q13.31 85511 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFF3-ZNF658 AFF3 chr2 100006632 - ZNF658 chr9 66908256 + Exonic hg38 BRCA TCGA-BH-A0H7-01A 1 3 In-Frame Inter-chr q11.2 Oncogene q21.11 Transcription factor 85512 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA3-PSMA8 LAMA3 chr18 23714072 + PSMA8 chr18 26178830 + Exonic hg38 BRCA TCGA-BH-A0H7-01A 1 3 In-Frame Intra-chr q11.2 q11.2 Seq+ 85513 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRG2-CYSTM1 NRG2 chr5 140042370 - CYSTM1 chr5 140243305 + Exonic hg38 BRCA TCGA-BH-A0H9-01A 15 26 In-Frame Intra-chr q31.2 q31.3 Seq+ 85514 ChimerSeq TCGA FAWG TCGA_RNA-Seq UQCC1-SAMHD1 UQCC1 chr20 35394092 - SAMHD1 chr20 36946804 - Exonic hg38 BRCA TCGA-BH-A0H9-01A 6 30 Out-of-frame Intra-chr q11.22 q11.23 Seq+ 85515 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC9A8-BICDL2 SLC9A8 chr20 49815189 + BICDL2 chr16 3031150 - Exonic hg38 BRCA TCGA-BH-A0H9-01A 9 15 Out-of-frame Inter-chr q13.13 p13.3 85516 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP6V0E1-BNIP1 ATP6V0E1 chr5 172994822 + BNIP1 chr5 173154322 + Exonic hg38 BRCA TCGA-BH-A0H9-01A 3 3 Out-of-frame Intra-chr q35.1 q35.1 85517 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTCL1-DLGAP1 MTCL1 chr18 8720496 + DLGAP1 chr18 3742512 - Exonic hg38 BRCA TCGA-BH-A0H9-01A 2 3 Out-of-frame Intra-chr p11.22 p11.31 85518 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAU1-ATF7IP2 STAU1 chr20 49117126 - ATF7IP2 chr16 10414574 + Exonic hg38 BRCA TCGA-BH-A0H9-01A 1 7 CDS-5'UTR Inter-chr q13.13 p13.2 85519 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDLRAD3-ENPP7P7 LDLRAD3 chr11 36098461 + ENPP7P7 chr11 67812753 - Exonic hg38 BRCA TCGA-BH-A0HB-01A 40 105 Out-of-frame Intra-chr p13 q13.2 85520 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPF4B-CDYL PRPF4B chr6 4021466 + CDYL chr6 4952266 + Exonic hg38 BRCA TCGA-BH-A0HB-01A 17 30 Out-of-frame Intra-chr p25.2 p25.1 Seq+ 85521 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM37-TUBD1 TRIM37 chr17 59104293 - TUBD1 chr17 59860424 - Exonic hg38 BRCA TCGA-BH-A0HB-01A 6 12 Out-of-frame Intra-chr q22 q23.1 Seq+ 85522 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L3-LAMA1 EPB41L3 chr18 5395067 - LAMA1 chr18 7037751 - Exonic hg38 BRCA TCGA-BH-A0HB-01A 4 13 In-Frame Intra-chr p11.31 Tumor suppressor gene p11.31 Seq+ 85523 ChimerSeq TCGA FAWG TCGA_RNA-Seq B3GLCT-MTUS2 B3GLCT chr13 31323895 + MTUS2 chr13 29439983 + Exonic hg38 BRCA TCGA-BH-A0HB-01A 3 5 In-Frame Intra-chr q12.3 q12.3 85524 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLTC-EPB41L3 CLTC chr17 59620173 + EPB41L3 chr18 5397426 - Exonic hg38 BRCA TCGA-BH-A0HB-01A 1 10 In-Frame Inter-chr q23.1 p11.31 Tumor suppressor gene 85525 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF564-AKAP8L ZNF564 chr19 12551330 - AKAP8L chr19 15410594 - Exonic hg38 BRCA TCGA-BH-A0HB-01A 2 4 Out-of-frame Intra-chr p13.2 Transcription factor p13.12 Transcription factor 85526 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRYL-OCIAD2 FRYL chr4 48780078 - OCIAD2 chr4 48904611 - Exonic hg38 BRCA TCGA-BH-A0HB-01A 1 1 5'UTR-5'UTR Intra-chr p11 p11 Seq+ 85527 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC22A23-SERPINB6 SLC22A23 chr6 3455906 - SERPINB6 chr6 2949069 - Exonic hg38 BRCA TCGA-BH-A0HB-01A 1 1 In-Frame Intra-chr p25.2 p25.2 85528 ChimerSeq TCGA FAWG TCGA_RNA-Seq COG5-CEP41 COG5 chr7 107412502 - CEP41 chr7 130394966 - Exonic hg38 BRCA TCGA-BH-A0HI-01A 4 61 5'UTR-3'UTR Intra-chr q32.2 Seq+ 85529 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA6A-DTWD2 SEMA6A chr5 116574185 - DTWD2 chr5 118944649 - Exonic hg38 BRCA TCGA-BH-A0HI-01A 2 4 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 85530 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTAGE5-MIPOL1 CTAGE5 chr14 39279537 + MIPOL1 chr14 37369517 + Exonic hg38 BRCA TCGA-BH-A0HL-01A 18 171 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 85531 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLPB-PTPN1 CLPB chr11 72329707 - PTPN1 chr20 50574517 + Exonic hg38 BRCA TCGA-BH-A0HL-01A 29 57 In-Frame Inter-chr q13.4 q13.13 Tumor suppressor gene Seq+ 85532 ChimerSeq TCGA FAWG TCGA_RNA-Seq EMSY-ACER3 EMSY chr11 76472840 + ACER3 chr11 76926557 + Exonic hg38 BRCA TCGA-BH-A0HL-01A 13 99 In-Frame Intra-chr q13.5 q13.5 85533 ChimerSeq TCGA FAWG TCGA_RNA-Seq SULF2-GAB2 SULF2 chr20 47757189 - GAB2 chr11 78280901 - Exonic hg38 BRCA TCGA-BH-A0HL-01A 13 68 Out-of-frame Inter-chr q13.12 q14.1 Seq+ 85534 ChimerSeq TCGA FAWG TCGA_RNA-Seq NARS2-TOP1 NARS2 chr11 78528842 - TOP1 chr20 41092472 + Exonic hg38 BRCA TCGA-BH-A0HL-01A 13 59 In-Frame Inter-chr q14.1 q12 Oncogene Seq+ 85535 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK2-PPP2CA ROCK2 chr2 11343996 - PPP2CA chr5 134206131 - Exonic hg38 BRCA TCGA-BH-A0HL-01A 14 52 In-Frame Inter-chr p25.1 AGC:DMPK q31.1 Tumor suppressor gene Seq+ 85536 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK10-SNX2 STK10 chr5 172187887 - SNX2 chr5 122826050 + Exonic hg38 BRCA TCGA-BH-A0HL-01A 10 47 In-Frame Intra-chr q35.1 Tumor suppressor gene q23.2 Seq+ 85537 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPF6-GATA5 PRPF6 chr20 63999759 + GATA5 chr20 62466551 - Exonic hg38 BRCA TCGA-BH-A0HL-01A 1 14 In-Frame Intra-chr q13.33 q13.33 Tumor suppressor gene Transcription factor 85538 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS4-GDPD4 INTS4 chr11 77907717 - GDPD4 chr11 77233172 - Exonic hg38 BRCA TCGA-BH-A0HL-01A 1 13 Out-of-frame Intra-chr q14.1 q13.5 85539 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRBN-GRM7 CRBN chr3 3167634 - GRM7 chr3 6828631 + Exonic hg38 BRCA TCGA-BH-A0HP-01A 3 15 CDS-5'UTR Intra-chr p26.2 Oncogene p26.1 Seq+ 85540 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICU1-ARHGAP22 MICU1 chr10 72407929 - ARHGAP22 chr10 48446619 - Exonic hg38 BRCA TCGA-BH-A0HU-01A 17 66 Out-of-frame Intra-chr q22.1 q11.23 Seq+ 85541 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF1-PDAP1 SMURF1 chr7 99143726 - PDAP1 chr7 99398013 - Exonic hg38 BRCA TCGA-BH-A0HU-01A 8 19 Out-of-frame Intra-chr q22.1 Seq+ 85542 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRYL-ZNF606 FRYL chr4 48710519 - ZNF606 chr19 57988721 - Exonic hg38 BRCA TCGA-BH-A0HU-01A 3 10 5'UTR-5'UTR Inter-chr p11 q13.43 Transcription factor Seq+ 85543 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2C1-FCGBP ATP2C1 chr3 130959341 + FCGBP chr19 39899697 - Exonic hg38 BRCA TCGA-BH-A0HW-01A 4 15 CDS-5'UTR Inter-chr q22.1 Seq+ 85544 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPHA6-TRMT10C EPHA6 chr3 96987993 + TRMT10C chr3 101564770 + Exonic hg38 BRCA TCGA-BH-A0HW-01A 1 5 CDS-5'UTR Intra-chr q11.2 q12.3 85545 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOOK3-MTFR1 HOOK3 chr8 42997637 + MTFR1 chr8 65770947 + Exonic hg38 BRCA TCGA-BH-A0HX-01A 4 11 CDS-3'UTR Intra-chr p11.21 Oncogene q13.1 Seq+ 85546 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCGF3-PIGG PCGF3 chr4 731110 + PIGG chr4 539153 + Exonic hg38 BRCA TCGA-BH-A0HX-01A 3 9 5'UTR-5'UTR Intra-chr p16.3 p16.3 Seq+ 85547 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLD3-EML2 PLD3 chr19 40378223 + EML2 chr19 45609788 - Exonic hg38 BRCA TCGA-BH-A0HX-01A 1 5 3'UTR-3'UTR Intra-chr q13.2 q13.32 85548 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKD2-CKM PRKD2 chr19 46704169 - CKM chr19 45311920 - Exonic hg38 BRCA TCGA-BH-A0HX-01A 1 5 In-Frame Intra-chr q13.32 q13.32 Seq+ 85549 ChimerSeq TCGA FAWG TCGA_RNA-Seq TENM4-INTS4 TENM4 chr11 78889785 - INTS4 chr11 77883952 - Exonic hg38 BRCA TCGA-BH-A0HY-01A 71 370 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 85550 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITPK1-ACO1 ITPK1 chr14 93115069 - ACO1 chr9 32405485 + Exonic hg38 BRCA TCGA-BH-A0HY-01A 33 121 5'UTR-5'UTR Inter-chr p21.1 Seq+ 85551 ChimerSeq TCGA FAWG TCGA_RNA-Seq C17orf102-RARRES3 C17orf102 chr17 34579079 - RARRES3 chr11 63539516 + Exonic hg38 BRCA TCGA-BH-A0HY-01A 14 32 Out-of-frame Inter-chr q12 q12.3 Tumor suppressor gene Seq+ 85552 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK2-RTN3 MARK2 chr11 63905043 + RTN3 chr11 63713971 + Exonic hg38 BRCA TCGA-BH-A0HY-01A 7 40 CDS-5'UTR Intra-chr q13.1 CAMK:CAMKL q13.1 Seq+ 85553 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMSS1-XRRA1 CMSS1 chr3 99818043 + XRRA1 chr11 74907273 - Exonic hg38 BRCA TCGA-BH-A0HY-01A 6 17 Out-of-frame Inter-chr q12.1 q13.4 Seq+ 85554 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRERF1-VARS2 TRERF1 chr6 42356515 - VARS2 chr6 30925544 + Exonic hg38 BRCA TCGA-BH-A0HY-01A 3 29 5'UTR-3'UTR Intra-chr p21.1 Transcription factor Seq+ 85555 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4K5-NIN MAP4K5 chr14 50504800 - NIN chr14 50738286 - Exonic hg38 BRCA TCGA-BH-A0HY-01A 3 15 Out-of-frame Intra-chr q22.1 q22.1 Oncogene Seq+ 85556 ChimerSeq TCGA FAWG TCGA_RNA-Seq STIP1-P2RY6 STIP1 chr11 64203622 + P2RY6 chr11 73296485 + Exonic hg38 BRCA TCGA-BH-A0HY-01A 2 12 In-Frame Intra-chr q13.1 q13.4 Seq+ 85557 ChimerSeq TCGA FAWG TCGA_RNA-Seq TICAM1-PTPRS TICAM1 chr19 4831614 - PTPRS chr19 5265196 - Exonic hg38 BRCA TCGA-BH-A0HY-01A 1 9 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 85558 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD3-OMG STARD3 chr17 39637231 + OMG chr17 31296337 - Exonic hg38 BRCA TCGA-BH-A0HY-01A 1 8 5'UTR-5'UTR Intra-chr q12 q11.2 85559 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNB1-ARRB1 CACNB1 chr17 39186793 - ARRB1 chr11 75274211 - Exonic hg38 BRCA TCGA-BH-A0HY-01A 1 7 In-Frame Inter-chr q12 q13.4 85560 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFHC1-ADGRL3 EFHC1 chr6 52424167 + ADGRL3 chr4 61497121 + Exonic hg38 BRCA TCGA-BH-A0HY-01A 2 3 5'UTR-5'UTR Inter-chr p12.2 q13.1 Oncogene 85561 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRERF1-PEX6 TRERF1 chr6 42451177 - PEX6 chr6 42975038 - Exonic hg38 BRCA TCGA-BH-A0HY-01A 1 5 5'UTR-CDS Intra-chr p21.1 Transcription factor p21.1 85562 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP3D1-ZNF682 AP3D1 chr19 2132471 - ZNF682 chr19 20007275 - Exonic hg38 BRCA TCGA-BH-A0HY-01A 1 4 Out-of-frame Intra-chr p13.3 p12 Transcription factor 85563 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM192A-C16orf62 FAM192A chr16 57186031 - C16orf62 chr16 19651976 + Exonic hg38 BRCA TCGA-BH-A0RX-01A 4 14 Out-of-frame Intra-chr q13 p12.3 Seq+ 85564 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS27A-MS4A4A RPS27A chr2 55234962 + MS4A4A chr11 60297197 + Exonic hg38 BRCA TCGA-BH-A0RX-01A 2 17 In-Frame Inter-chr p16.1 q12.2 Seq+ 85565 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGSF3-KDM2A IGSF3 chr1 116666284 - KDM2A chr11 67180079 + Exonic hg38 BRCA TCGA-BH-A0W3-01A 23 43 Out-of-frame Inter-chr p13.1 q13.2 Transcription factor Seq+ 85566 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAGI3-NOTCH2 MAGI3 chr1 113391349 + NOTCH2 chr1 119997332 - Exonic hg38 BRCA TCGA-BH-A0W3-01A 10 13 In-Frame Intra-chr p13.2 p12 Oncogene Tumor suppressor gene Seq+ 85567 ChimerSeq TCGA FAWG TCGA_RNA-Seq FZD4-LAMTOR1 FZD4 chr11 86954801 - LAMTOR1 chr11 72099256 - Exonic hg38 BRCA TCGA-BH-A0W3-01A 2 36 In-Frame Intra-chr q14.2 q13.4 Seq+ 85568 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP5-CASQ2 LRP5 chr11 68357847 + CASQ2 chr1 115744912 - Exonic hg38 BRCA TCGA-BH-A0W3-01A 1 13 Out-of-frame Inter-chr q13.2 p13.1 Seq+ 85569 ChimerSeq TCGA FAWG TCGA_RNA-Seq COG5-DPP6 COG5 chr7 107412502 - DPP6 chr7 154727767 + Exonic hg38 BRCA TCGA-BH-A0W7-01A 2 20 5'UTR-5'UTR Intra-chr Seq+ 85570 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2K4-NIPSNAP1 MAP2K4 chr17 12021001 + NIPSNAP1 chr22 29561862 - Exonic hg38 BRCA TCGA-BH-A0W7-01A 2 3 In-Frame Inter-chr p12 STE:STE7 Oncogene Tumor suppressor gene q12.2 Seq+ 85571 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP1B1-TTC28 AP1B1 chr22 29334265 - TTC28 chr22 28297852 - Exonic hg38 BRCA TCGA-BH-A0W7-01A 1 6 Out-of-frame Intra-chr q12.2 q12.1 85572 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKAR1A-ZBTB20 PRKAR1A chr17 68524958 + ZBTB20 chr3 115027574 - Exonic hg38 BRCA TCGA-BH-A0WA-01A 5 10 CDS-5'UTR Inter-chr q24.2 Oncogene Tumor suppressor gene q13.31 Transcription factor Seq+ 85573 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBA3-FRMD4B UBA3 chr3 69077798 - FRMD4B chr3 69176656 - Exonic hg38 BRCA TCGA-BH-A0WA-01A 2 15 Out-of-frame Intra-chr p14.1 p14.1 Seq+ 85574 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSPD1-GPR1 HSPD1 chr2 197493324 - GPR1 chr2 206177275 - Exonic hg38 BRCA TCGA-BH-A0WA-01A 2 3 CDS-5'UTR Intra-chr q33.1 Tumor suppressor gene 85575 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLF3-SCFD2 KLF3 chr4 38689879 + SCFD2 chr4 53145582 - Exonic hg38 BRCA TCGA-BH-A0WA-01A 1 7 Out-of-frame Intra-chr p14 Transcription factor q12 Seq+ 85576 ChimerSeq TCGA FAWG TCGA_RNA-Seq C11orf49-RTN4 C11orf49 chr11 46936851 + RTN4 chr2 54974764 - Exonic hg38 BRCA TCGA-BH-A0WA-01A 2 1 Out-of-frame Inter-chr p11.2 p16.1 Tumor suppressor gene 85577 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL28A1-MTMR1 COL28A1 chr7 7452319 - MTMR1 chrX 150736595 + Exonic hg38 BRCA TCGA-BH-A0WA-01A 1 1 In-Frame Inter-chr p21.3 q28 85578 ChimerSeq TCGA FAWG TCGA_RNA-Seq VWA8-RB1 VWA8 chr13 41865736 - RB1 chr13 48342599 + Exonic hg38 BRCA TCGA-BH-A18G-01A 2 3 In-Frame Intra-chr q14.11 q14.2 Oncogene Tumor suppressor gene Seq+ 85579 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPKAPK5-GNPTAB MAPKAPK5 chr12 111866231 + GNPTAB chr12 101790057 - Exonic hg38 BRCA TCGA-BH-A18H-01A 1 12 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q23.2 Seq+ 85580 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAGI3-ATF6 MAGI3 chr1 113549631 + ATF6 chr1 161860207 + Exonic hg38 BRCA TCGA-BH-A18H-01A 2 7 Out-of-frame Intra-chr p13.2 q23.3 Transcription factor Seq+ 85581 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R12C-ZNF460 PPP1R12C chr19 55103409 - ZNF460 chr19 57284551 + Exonic hg38 BRCA TCGA-BH-A18H-01A 1 6 Out-of-frame Intra-chr q13.42 q13.43 Transcription factor Seq+ 85582 ChimerSeq TCGA FAWG TCGA_RNA-Seq POR-MDH2 POR chr7 75915179 + MDH2 chr7 76054830 + Exonic hg38 BRCA TCGA-BH-A18H-01A 1 3 5'UTR-CDS Intra-chr q11.23 q11.23 Seq+ 85583 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCHSD2-CPT1A FCHSD2 chr11 73083695 - CPT1A chr11 68794911 - Exonic hg38 BRCA TCGA-BH-A18I-01A 14 160 In-Frame Intra-chr q13.4 q13.3 Seq+ 85584 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO1-ENPP7P8 ANO1 chr11 70088084 + ENPP7P8 chr11 71780106 + Exonic hg38 BRCA TCGA-BH-A18I-01A 13 6 Out-of-frame Intra-chr q13.3 q13.4 85585 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAG4-PLEKHA2 BAG4 chr8 38207766 + PLEKHA2 chr8 38917907 + Exonic hg38 BRCA TCGA-BH-A18I-01A 6 23 CDS-5'UTR Intra-chr p11.23 p11.22 Seq+ 85586 ChimerSeq TCGA FAWG TCGA_RNA-Seq NADSYN1-DLG2 NADSYN1 chr11 71491903 + DLG2 chr11 85111735 - Exonic hg38 BRCA TCGA-BH-A18I-01A 1 3 In-Frame Intra-chr q13.4 q14.1 85587 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSL1-TMEM206 NSL1 chr1 212782372 - TMEM206 chr1 212387100 - Exonic hg38 BRCA TCGA-BH-A18J-01A 18 58 Out-of-frame Intra-chr q32.3 q32.3 Seq+ 85588 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRF-LEFTY2 PTPRF chr1 43553941 + LEFTY2 chr1 225940002 - Exonic hg38 BRCA TCGA-BH-A18J-01A 20 48 In-Frame Intra-chr p34.2 q42.12 Tumor suppressor gene Seq+ 85589 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZCCHC14-SNX7 ZCCHC14 chr16 87460008 - SNX7 chr1 98760054 + Exonic hg38 BRCA TCGA-BH-A18J-01A 11 53 Out-of-frame Inter-chr q24.2 p21.3 Seq+ 85590 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4A-CREB3L4 KDM4A chr1 43668019 + CREB3L4 chr1 153972744 + Exonic hg38 BRCA TCGA-BH-A18J-01A 10 48 Out-of-frame Intra-chr p34.2 q21.3 Transcription factor Seq+ 85591 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4A-DAP3P1 KDM4A chr1 43668019 + DAP3P1 chr1 155586650 + Exonic hg38 BRCA TCGA-BH-A18J-01A 15 13 Out-of-frame Intra-chr p34.2 q22 85592 ChimerSeq TCGA FAWG TCGA_RNA-Seq VGLL4-SH3BP5 VGLL4 chr3 11702971 - SH3BP5 chr3 15269877 - Exonic hg38 BRCA TCGA-BH-A18J-01A 8 28 Out-of-frame Intra-chr p25.2 p25.1 Seq+ 85593 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRN2-CTSS LRRN2 chr1 204685320 - CTSS chr1 150757980 - Exonic hg38 BRCA TCGA-BH-A18J-01A 7 23 5'UTR-CDS Intra-chr q32.1 q21.3 Seq+ 85594 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIVEP3-CREB3L4 HIVEP3 chr1 41700916 - CREB3L4 chr1 153973195 + Exonic hg38 BRCA TCGA-BH-A18J-01A 3 17 5'UTR-5'UTR Intra-chr p34.2 Tumor suppressor gene Transcription factor q21.3 Transcription factor Seq+ 85595 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMC1-VPS37C CMC1 chr3 28241812 + VPS37C chr11 61138835 - Exonic hg38 BRCA TCGA-BH-A18J-01A 1 15 5'UTR-5'UTR Inter-chr p24.1 q12.2 Seq+ 85596 ChimerSeq TCGA FAWG TCGA_RNA-Seq NR2C2-COLQ NR2C2 chr3 14962492 + COLQ chr3 15489637 - Exonic hg38 BRCA TCGA-BH-A18J-01A 4 3 5'UTR-CDS Intra-chr p25.1 Tumor suppressor gene Transcription factor p25.1 Seq+ 85597 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFYC-PLXNA2 NFYC chr1 40738948 + PLXNA2 chr1 208218002 - Exonic hg38 BRCA TCGA-BH-A18J-01A 3 3 CDS-5'UTR Intra-chr p34.2 Transcription factor q32.2 Seq+ 85598 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0100-CYP4F23P KIAA0100 chr17 28628265 - CYP4F23P chr19 15583350 + Exonic hg38 BRCA TCGA-BH-A18J-01A 1 7 Out-of-frame Inter-chr q11.2 p13.12 85599 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF492-NLRP5 ZNF492 chr19 22634474 + NLRP5 chr19 56038025 + Exonic hg38 BRCA TCGA-BH-A18K-01A 6 67 5'UTR-CDS Intra-chr p12 Transcription factor q13.43 Seq+ 85600 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-SLC30A8 PVT1 chr8 127794734 + SLC30A8 chr8 117152944 + Exonic hg38 BRCA TCGA-BH-A18L-01A 209 1423 5'UTR-CDS Intra-chr q24.21 q24.11 Seq+ 85601 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYSM1-APOM MYSM1 chr1 58695129 - APOM chr6 31656472 + Exonic hg38 BRCA TCGA-BH-A18L-01A 56 107 CDS-3'UTR Inter-chr p32.1 Transcription factor Seq+ 85602 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR1204-SLC30A8 MIR1204 chr8 127796008 + SLC30A8 chr8 117157691 + Exonic hg38 BRCA TCGA-BH-A18L-01A 7 153 5'UTR-CDS Intra-chr q24.21 q24.11 Seq+ 85603 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNS3-HSPA1L TNS3 chr7 47280164 - HSPA1L chr6 31811985 - Exonic hg38 BRCA TCGA-BH-A18L-01A 5 21 CDS-5'UTR Inter-chr p12.3 Seq+ 85604 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSH2-TMEM247 MSH2 chr2 47408555 + TMEM247 chr2 46484244 + Exonic hg38 BRCA TCGA-BH-A18L-01A 4 4 Out-of-frame Intra-chr p21 Oncogene Tumor suppressor gene p21 Seq+ 85605 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP5-NOX4 LRP5 chr11 68439916 + NOX4 chr11 89355043 - Exonic hg38 BRCA TCGA-BH-A18L-01A 3 6 Out-of-frame Intra-chr q13.2 q14.3 Seq+ 85606 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIAS2-IER3IP1 PIAS2 chr18 46890580 - IER3IP1 chr18 47157537 - Exonic hg38 BRCA TCGA-BH-A18L-01A 1 6 In-Frame Intra-chr q21.1 q21.1 85607 ChimerSeq TCGA FAWG TCGA_RNA-Seq SACM1L-ANAPC13 SACM1L chr3 45689497 + ANAPC13 chr3 134482931 - Exonic hg38 BRCA TCGA-BH-A18P-01A 42 43 5'UTR-5'UTR Intra-chr p21.31 q22.2 Seq+ 85608 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0319L-PAGE2B KIAA0319L chr1 35554350 - PAGE2B chrX 55076034 + Exonic hg38 BRCA TCGA-BH-A18Q-01A 3 4 CDS-5'UTR Inter-chr p34.3 p11.21 Seq+ 85609 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF7-VMP1 DCAF7 chr17 63550815 + VMP1 chr17 59731421 + Exonic hg38 BRCA TCGA-BH-A18R-01A 125 413 5'UTR-5'UTR Intra-chr q23.3 q23.1 Seq+ 85610 ChimerSeq TCGA FAWG TCGA_RNA-Seq LUC7L3-C17orf64 LUC7L3 chr17 50737026 + C17orf64 chr17 60429362 + Exonic hg38 BRCA TCGA-BH-A18R-01A 132 205 Out-of-frame Intra-chr q21.33 q23.2 Seq+ 85611 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC35F2-CCDC162P SLC35F2 chr11 107858658 - CCDC162P chr6 109348427 + Exonic hg38 BRCA TCGA-BH-A18R-01A 18 137 CDS-5'UTR Inter-chr q22.3 q21 Seq+ 85612 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOPC-ABLIM1 GOPC chr6 117578900 - ABLIM1 chr10 114491878 - Exonic hg38 BRCA TCGA-BH-A18R-01A 19 101 In-Frame Inter-chr q22.1 q25.3 Seq+ 85613 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1D-CCND1 PPM1D chr17 60648082 + CCND1 chr11 69652174 + Exonic hg38 BRCA TCGA-BH-A18R-01A 19 86 CDS-3'UTR Inter-chr q23.2 q13.3 Oncogene Seq+ 85614 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-RNF169 BCAS3 chr17 60709325 + RNF169 chr11 74810184 + Exonic hg38 BRCA TCGA-BH-A18R-01A 22 50 In-Frame Inter-chr q23.2 q13.4 Seq+ 85615 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGS1-KIF22 PGS1 chr17 78378808 + KIF22 chr16 29796893 + Exonic hg38 BRCA TCGA-BH-A18R-01A 8 11 Out-of-frame Inter-chr q25.3 p11.2 Seq+ 85616 ChimerSeq TCGA FAWG TCGA_RNA-Seq YPEL2-PAK1 YPEL2 chr17 59397488 + PAK1 chr11 77336282 - Exonic hg38 BRCA TCGA-BH-A18R-01A 4 25 3'UTR-CDS Inter-chr q22 q14.1 STE:STE20 Seq+ 85617 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUZ12P1-ORAOV1 SUZ12P1 chr17 30769965 + ORAOV1 chr11 69673321 - Exonic hg38 BRCA TCGA-BH-A18R-01A 2 27 Out-of-frame Inter-chr q11.2 q13.3 85618 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-CDK5RAP3 NF1 chr17 31265339 + CDK5RAP3 chr17 47981163 + Exonic hg38 BRCA TCGA-BH-A18R-01A 3 21 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q21.32 Seq+ 85619 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-SHANK2 BCAS3 chr17 60747279 + SHANK2 chr11 70502931 - Exonic hg38 BRCA TCGA-BH-A18R-01A 3 20 Out-of-frame Inter-chr q23.2 q13.4 Seq+ 85620 ChimerSeq TCGA FAWG TCGA_RNA-Seq HEATR6-PPME1 HEATR6 chr17 60047309 - PPME1 chr11 74203728 + Exonic hg38 BRCA TCGA-BH-A18R-01A 4 14 Out-of-frame Inter-chr q23.1 q13.4 Seq+ 85621 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP5-DRAP1 LRP5 chr11 68365700 + DRAP1 chr11 65919782 + Exonic hg38 BRCA TCGA-BH-A18R-01A 3 5 Out-of-frame Intra-chr q13.2 q13.1 Transcription factor Seq+ 85622 ChimerSeq TCGA FAWG TCGA_RNA-Seq IQGAP3-SH2D2A IQGAP3 chr1 156556533 - SH2D2A chr1 156809807 - Exonic hg38 BRCA TCGA-BH-A18R-01A 1 3 In-Frame Intra-chr q22 q23.1 Seq+ 85623 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLGA4-ANO1 GOLGA4 chr3 37347296 + ANO1 chr11 70163283 + Exonic hg38 BRCA TCGA-BH-A18R-01A 1 2 Out-of-frame Inter-chr p22.2 q13.3 85624 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-THRSP FBXL20 chr17 39401361 - THRSP chr11 78067659 + Exonic hg38 BRCA TCGA-BH-A18R-01A 1 1 CDS-3'UTR Inter-chr q12 q14.1 85625 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-TRIM49B FBXL20 chr17 39401361 - TRIM49B chr11 49031596 + Exonic hg38 BRCA TCGA-BH-A18R-01A 1 1 CDS-5'UTR Inter-chr q12 p11.12 85626 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPF2-USP32 WIPF2 chr17 40219492 + USP32 chr17 60345608 - Exonic hg38 BRCA TCGA-BH-A18R-01A 1000 1000 5'UTR-CDS Intra-chr q21.2 q23.2 Seq+ 85627 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALG8-USP32 ALG8 chr11 78139494 - USP32 chr17 60345608 - Exonic hg38 BRCA TCGA-BH-A18R-01A 1000 1000 Out-of-frame Inter-chr q14.1 q23.2 Seq+ 85628 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-POU5F1B PVT1 chr8 127794734 + POU5F1B chr8 127414888 + Exonic hg38 BRCA TCGA-BH-A18T-01A 65 238 5'UTR-5'UTR Intra-chr q24.21 q24.21 Transcription factor Seq+ 85629 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTB-RNF216 ACTB chr7 5530524 - RNF216 chr7 5716766 - Exonic hg38 BRCA TCGA-BH-A18T-01A 27 337 5'UTR-CDS Intra-chr p22.1 p22.1 Seq+ 85630 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2J2-GNB1 UBE2J2 chr1 1267862 - GNB1 chr1 1804581 - Exonic hg38 BRCA TCGA-BH-A18T-01A 5 228 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 85631 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO5B-DYM MYO5B chr18 50194767 - DYM chr18 49118926 - Exonic hg38 BRCA TCGA-BH-A18T-01A 13 26 In-Frame Intra-chr q21.1 q21.1 Seq+ 85632 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF11-ETV3 ARHGEF11 chr1 157044299 - ETV3 chr1 157136365 - Exonic hg38 BRCA TCGA-BH-A18T-01A 6 37 CDS-5'UTR Intra-chr q23.1 q23.1 Transcription factor Seq+ 85633 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF318-PDE3A ZNF318 chr6 43342676 - PDE3A chr12 20556660 + Exonic hg38 BRCA TCGA-BH-A18T-01A 9 25 In-Frame Inter-chr p21.1 Transcription factor p12.2 Seq+ 85634 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPAT4-KCNB2 GPAT4 chr8 41578278 + KCNB2 chr8 72935935 + Exonic hg38 BRCA TCGA-BH-A18T-01A 9 21 5'UTR-CDS Intra-chr p11.21 q21.11 85635 ChimerSeq TCGA FAWG TCGA_RNA-Seq C11orf80-BBS1 C11orf80 chr11 66759096 + BBS1 chr11 66526649 + Exonic hg38 BRCA TCGA-BH-A18T-01A 9 19 In-Frame Intra-chr q13.2 q13.2 Seq+ 85636 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNK1-PRMT8 WNK1 chr12 862270 + PRMT8 chr12 3540606 + Exonic hg38 BRCA TCGA-BH-A18T-01A 8 23 In-Frame Intra-chr p13.33 p13.32 Seq+ 85637 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE4B-GADD45A PDE4B chr1 66368969 + GADD45A chr1 67686025 + Exonic hg38 BRCA TCGA-BH-A18T-01A 8 13 Out-of-frame Intra-chr p31.3 p31.3 Tumor suppressor gene Seq+ 85638 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK10-SH3PXD2B STK10 chr5 172156624 - SH3PXD2B chr5 172422496 - Exonic hg38 BRCA TCGA-BH-A18T-01A 4 21 In-Frame Intra-chr q35.1 Tumor suppressor gene q35.1 Seq+ 85639 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASP8-ALS2CR12 CASP8 chr2 201266791 + ALS2CR12 chr2 201330833 - Exonic hg38 BRCA TCGA-BH-A18T-01A 5 15 Out-of-frame Intra-chr q33.1 Oncogene Tumor suppressor gene q33.1 Seq+ 85640 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS35-PPFIBP1 MRPS35 chr12 27724186 + PPFIBP1 chr12 27676428 + Exonic hg38 BRCA TCGA-BH-A18T-01A 6 9 In-Frame Intra-chr p11.22 p11.23 Seq+ 85641 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTNB-RBKS DTNB chr2 25576838 - RBKS chr2 27858571 - Exonic hg38 BRCA TCGA-BH-A18T-01A 3 20 Out-of-frame Intra-chr p23.3 p23.2 Seq+ 85642 ChimerSeq TCGA FAWG TCGA_RNA-Seq POMK-NKAIN3 POMK chr8 43103830 + NKAIN3 chr8 62579539 + Exonic hg38 BRCA TCGA-BH-A18T-01A 2 21 In-Frame Intra-chr p11.21 q12.3 85643 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACO2-TEF ACO2 chr22 41469182 + TEF chr22 41387351 + Exonic hg38 BRCA TCGA-BH-A18T-01A 2 11 5'UTR-CDS Intra-chr q13.2 q13.2 Transcription factor Seq+ 85644 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROPN1B-ALG1L ROPN1B chr3 125977165 + ALG1L chr3 125933696 - Exonic hg38 BRCA TCGA-BH-A18T-01A 2 8 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 85645 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGD1-PFKFB1 FGD1 chrX 54495126 - PFKFB1 chrX 54963382 - Exonic hg38 BRCA TCGA-BH-A18T-01A 1 2 In-Frame Intra-chr p11.22 p11.21 85646 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD3-PSD3 NSD3 chr8 38288487 - PSD3 chr8 18655685 - Exonic hg38 BRCA TCGA-BH-A18U-01A 100 311 In-Frame Intra-chr p11.23 Tumor suppressor gene p22 85647 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD54L2-ERC2 RAD54L2 chr3 51541650 + ERC2 chr3 55511276 - Exonic hg38 BRCA TCGA-BH-A18U-01A 12 21 5'UTR-3'UTR Intra-chr p21.2 p14.3 Seq+ 85648 ChimerSeq TCGA FAWG TCGA_RNA-Seq BZW2-CLCN3 BZW2 chr7 16646288 + CLCN3 chr4 169680050 + Exonic hg38 BRCA TCGA-BH-A18U-01A 4 15 5'UTR-CDS Inter-chr p21.1 q33 Seq+ 85649 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIS3L2-UBE2E3 DIS3L2 chr2 232300119 + UBE2E3 chr2 180984043 + Exonic hg38 BRCA TCGA-BH-A18U-01A 2 19 In-Frame Intra-chr q37.1 q31.3 Seq+ 85650 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLSTN2-CCDC39 CLSTN2 chr3 139935483 + CCDC39 chr3 180847624 - Exonic hg38 BRCA TCGA-BH-A18U-01A 6 2 CDS-5'UTR Intra-chr q23 q26.33 85651 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADK-LRRTM3 ADK chr10 74670269 + LRRTM3 chr10 67097587 + Exonic hg38 BRCA TCGA-BH-A18U-01A 2 14 Out-of-frame Intra-chr q22.2 q21.3 Seq+ 85652 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4B-UBXN6 KDM4B chr19 4969230 + UBXN6 chr19 4447625 - Exonic hg38 BRCA TCGA-BH-A18U-01A 4 4 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 85653 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZZEF1-CCDC144A ZZEF1 chr17 4024919 - CCDC144A chr17 16707469 + Exonic hg38 BRCA TCGA-BH-A18U-01A 3 6 Out-of-frame Intra-chr p13.2 p11.2 Seq+ 85654 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOA1-SPINK2 NOA1 chr4 56973148 - SPINK2 chr4 56820579 - Exonic hg38 BRCA TCGA-BH-A18U-01A 1 13 Out-of-frame Intra-chr q12 q12 85655 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOT1-FGFR1 RHOT1 chr17 32142729 + FGFR1 chr8 38457534 - Exonic hg38 BRCA TCGA-BH-A18U-01A 2 8 Out-of-frame Inter-chr q11.2 p11.23 TK:FGFR Oncogene Seq+ 85656 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED20-RNF182 MED20 chr6 41909269 - RNF182 chr6 13974210 + Exonic hg38 BRCA TCGA-BH-A18U-01A 1 8 CDS-5'UTR Intra-chr p21.1 p23 Seq+ 85657 ChimerSeq TCGA FAWG TCGA_RNA-Seq LARGE1-ATP6V1E1 LARGE1 chr22 33564848 - ATP6V1E1 chr22 17613320 - Exonic hg38 BRCA TCGA-BH-A18U-01A 2 3 Out-of-frame Intra-chr q12.3 q11.21 85658 ChimerSeq TCGA FAWG TCGA_RNA-Seq SARS-KIAA1324 SARS chr1 109224048 + KIAA1324 chr1 109161894 + Exonic hg38 BRCA TCGA-BH-A18V-01A 32 153 In-Frame Intra-chr p13.3 p13.3 Seq+ 85659 ChimerSeq TCGA FAWG TCGA_RNA-Seq MVP-KIF22 MVP chr16 29840459 + KIF22 chr16 29803449 + Exonic hg38 BRCA TCGA-BH-A18V-01A 23 57 In-Frame Intra-chr p11.2 p11.2 Seq+ 85660 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRP2-PARD3B NRP2 chr2 205766803 + PARD3B chr2 205615456 + Exonic hg38 BRCA TCGA-BH-A18V-01A 20 53 Out-of-frame Intra-chr q33.3 q33.3 Seq+ 85661 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUNX2-IFT88 RUNX2 chr6 45492114 + IFT88 chr13 20690705 + Exonic hg38 BRCA TCGA-BH-A18V-01A 13 47 In-Frame Inter-chr p21.1 Tumor suppressor gene Transcription factor q12.11 Tumor suppressor gene Seq+ 85662 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESRP1-INTS8 ESRP1 chr8 94706034 + INTS8 chr8 94849941 + Exonic hg38 BRCA TCGA-BH-A18V-01A 7 59 Out-of-frame Intra-chr q22.1 Tumor suppressor gene q22.1 Seq+ 85663 ChimerSeq TCGA FAWG TCGA_RNA-Seq CP-SOX5 CP chr3 149221647 - SOX5 chr12 23846193 - Exonic hg38 BRCA TCGA-BH-A18V-01A 9 29 Out-of-frame Inter-chr q25.1 p12.1 Transcription factor Seq+ 85664 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKM-TRPV3 PKM chr15 72209673 - TRPV3 chr17 3535713 - Exonic hg38 BRCA TCGA-BH-A18V-01A 8 12 In-Frame Inter-chr q23 p13.2 Seq+ 85665 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACKR3-CASC4 ACKR3 chr2 236567841 + CASC4 chr15 44379690 + Exonic hg38 BRCA TCGA-BH-A18V-01A 4 5 5'UTR-5'UTR Inter-chr q37.3 q15.3 85666 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDR2-GAB1 DDR2 chr1 162719145 + GAB1 chr4 143415477 + Exonic hg38 BRCA TCGA-BH-A18V-01A 4 4 Out-of-frame Inter-chr q23.3 TK:DDR Oncogene Tumor suppressor gene q31.21 Seq+ 85667 ChimerSeq TCGA FAWG TCGA_RNA-Seq EYA3-SUSD6 EYA3 chr1 28035544 - SUSD6 chr14 69658513 + Exonic hg38 BRCA TCGA-BH-A18V-01A 3 8 CDS-5'UTR Inter-chr p35.3 q24.1 85668 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAP30BP-MRPL58 SAP30BP chr17 75693482 + MRPL58 chr17 75017078 + Exonic hg38 BRCA TCGA-BH-A18V-01A 3 8 Out-of-frame Intra-chr q25.1 q25.1 85669 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUNX1-CLDN14 RUNX1 chr21 35580660 - CLDN14 chr21 36461776 - Exonic hg38 BRCA TCGA-BH-A18V-01A 3 3 5'UTR-5'UTR Intra-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q22.13 85670 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX18-WDR93 SNX18 chr5 54519573 + WDR93 chr15 89727157 + Exonic hg38 BRCA TCGA-BH-A18V-01A 1 3 In-Frame Inter-chr q11.2 q26.1 Seq+ 85671 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXT1-RSF1 EXT1 chr8 117812872 - RSF1 chr11 77740936 - Exonic hg38 BRCA TCGA-BH-A1EN-01A 11 33 In-Frame Inter-chr q24.11 Oncogene Tumor suppressor gene q14.1 Seq+ 85672 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAB2-ALG8 GAB2 chr11 78417646 - ALG8 chr11 78127436 - Exonic hg38 BRCA TCGA-BH-A1EN-01A 11 33 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 85673 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNB1-EMSY CACNB1 chr17 39187479 - EMSY chr11 76496215 + Exonic hg38 BRCA TCGA-BH-A1EN-01A 5 42 Out-of-frame Inter-chr q12 q13.5 85674 ChimerSeq TCGA FAWG TCGA_RNA-Seq TENM4-RBM4 TENM4 chr11 79064738 - RBM4 chr11 66665856 + Exonic hg38 BRCA TCGA-BH-A1EN-01A 6 24 In-Frame Intra-chr q14.1 q13.2 Tumor suppressor gene Seq+ 85675 ChimerSeq TCGA FAWG TCGA_RNA-Seq PC-THRSP PC chr11 66952430 - THRSP chr11 78067659 + Exonic hg38 BRCA TCGA-BH-A1EN-01A 2 19 5'UTR-3'UTR Intra-chr q13.2 q14.1 Seq+ 85676 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB7-ACTN3 GRB7 chr17 39746202 + ACTN3 chr11 66551239 + Exonic hg38 BRCA TCGA-BH-A1EN-01A 3 12 In-Frame Inter-chr q12 q13.2 Seq+ 85677 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCTD21-TENM4 KCTD21 chr11 78188573 - TENM4 chr11 79065007 - Exonic hg38 BRCA TCGA-BH-A1EN-01A 3 8 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 85678 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACER3-PC ACER3 chr11 76959031 + PC chr11 66853383 - Exonic hg38 BRCA TCGA-BH-A1EN-01A 2 10 In-Frame Intra-chr q13.5 q13.2 Seq+ 85679 ChimerSeq TCGA FAWG TCGA_RNA-Seq QSER1-DEPDC7 QSER1 chr11 32893334 + DEPDC7 chr11 33025659 + Exonic hg38 BRCA TCGA-BH-A1EN-01A 1 7 Out-of-frame Intra-chr p13 p13 85680 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL14A1-PLEKHA2 COL14A1 chr8 120208361 + PLEKHA2 chr8 38950850 + Exonic hg38 BRCA TCGA-BH-A1EN-01A 1 2 Out-of-frame Intra-chr q24.12 p11.22 85681 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP170-PRKACB CEP170 chr1 243199060 - PRKACB chr1 84179177 + Exonic hg38 BRCA TCGA-BH-A1EO-01A 1 21 5'UTR-CDS Intra-chr p31.1 85682 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-SUZ12P1 PPFIA1 chr11 70272436 + SUZ12P1 chr17 30759491 + Exonic hg38 BRCA TCGA-BH-A1ES-01A 5 11 5'UTR-5'UTR Inter-chr q13.3 q11.2 85683 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR1-CSMD1 FGFR1 chr8 38457356 - CSMD1 chr8 4032099 - Exonic hg38 BRCA TCGA-BH-A1ES-01A 2 8 In-Frame Intra-chr p11.23 TK:FGFR Oncogene p23.2 Tumor suppressor gene Seq+ 85684 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNK-ICAM2 UNK chr17 75784984 + ICAM2 chr17 64006735 - Exonic hg38 BRCA TCGA-BH-A1ES-01A 3 3 5'UTR-5'UTR Intra-chr q25.1 q23.3 Seq+ 85685 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD3-CSMD1 NSD3 chr8 38314647 - CSMD1 chr8 2938744 - Exonic hg38 BRCA TCGA-BH-A1ES-01A 1 8 Out-of-frame Intra-chr p11.23 Tumor suppressor gene p23.2 Tumor suppressor gene 85686 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT9-ARSG SEPT9 chr17 77307197 + ARSG chr17 68343604 + Exonic hg38 BRCA TCGA-BH-A1ES-01A 1 6 Out-of-frame Intra-chr q24.2 Seq+ 85687 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSH2-DHX40 SSH2 chr17 29929938 - DHX40 chr17 59566627 + Exonic hg38 BRCA TCGA-BH-A1ES-01A 1 2 Out-of-frame Intra-chr q11.2 q23.1 85688 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF15-PTRH2 TAF15 chr17 35824198 + PTRH2 chr17 59697978 - Exonic hg38 BRCA TCGA-BH-A1ES-01A 1 2 3'UTR-CDS Intra-chr q12 q23.1 85689 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPYD-STAB2 DPYD chr1 97883264 - STAB2 chr12 103660331 + Exonic hg38 BRCA TCGA-BH-A1EU-01A 5 20 In-Frame Inter-chr p21.3 Oncogene q23.3 Seq+ 85690 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC4-ATM EXOC4 chr7 134007835 + ATM chr11 108243953 + Exonic hg38 BRCA TCGA-BH-A1EU-01A 2 3 Out-of-frame Inter-chr q33 q22.3 Atypical:PIKK Oncogene Tumor suppressor gene Seq+ 85691 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-OSBPL8 FRS2 chr12 69530960 + OSBPL8 chr12 76356728 - Exonic hg38 BRCA TCGA-BH-A1EV-01A 15 58 5'UTR-CDS Intra-chr q15 q21.2 Seq+ 85692 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMBIM4-INO80 TMBIM4 chr12 66169855 - INO80 chr15 41005687 - Exonic hg38 BRCA TCGA-BH-A1EV-01A 13 26 In-Frame Inter-chr q14.3 q15.1 Seq+ 85693 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSH2-UST SSH2 chr17 29929938 - UST chr6 148941279 + Exonic hg38 BRCA TCGA-BH-A1EV-01A 6 26 In-Frame Inter-chr q11.2 q25.1 Seq+ 85694 ChimerSeq TCGA FAWG TCGA_RNA-Seq USPL1-IGSF8 USPL1 chr13 30631474 + IGSF8 chr1 160094171 - Exonic hg38 BRCA TCGA-BH-A1EV-01A 7 22 In-Frame Inter-chr q12.3 q23.2 Seq+ 85695 ChimerSeq TCGA FAWG TCGA_RNA-Seq AIM1-STAT6 AIM1 chr6 106361081 + STAT6 chr12 57098902 - Exonic hg38 BRCA TCGA-BH-A1EV-01A 7 10 Out-of-frame Inter-chr q13.3 Transcription factor 85696 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNB1-KIFAP3 GNB1 chr1 1804419 - KIFAP3 chr1 170024596 - Exonic hg38 BRCA TCGA-BH-A1EV-01A 2 27 In-Frame Intra-chr p36.33 q24.2 Seq+ 85697 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIRREL-RBP7 KIRREL chr1 157993728 + RBP7 chr1 10015782 + Exonic hg38 BRCA TCGA-BH-A1EV-01A 5 15 Out-of-frame Intra-chr q23.1 p36.22 Seq+ 85698 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGCD-RARA SGCD chr5 156595051 + RARA chr17 40348316 + Exonic hg38 BRCA TCGA-BH-A1EV-01A 4 18 In-Frame Inter-chr q33.2 q21.2 Oncogene Transcription factor Seq+ 85699 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCGR2A-SPTA1 FCGR2A chr1 161506591 + SPTA1 chr1 158662945 - Exonic hg38 BRCA TCGA-BH-A1EV-01A 6 8 Out-of-frame Intra-chr q23.3 q23.1 Seq+ 85700 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETNK1-PPFIBP1 ETNK1 chr12 22625586 + PPFIBP1 chr12 27646062 + Exonic hg38 BRCA TCGA-BH-A1EV-01A 4 15 In-Frame Intra-chr p12.1 p11.23 Seq+ 85701 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESR1-BNC2 ESR1 chr6 151842787 + BNC2 chr9 16738485 - Exonic hg38 BRCA TCGA-BH-A1EV-01A 3 12 Out-of-frame Inter-chr q25.1 Oncogene Tumor suppressor gene Transcription factor p22.2 Transcription factor Seq+ 85702 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP23-NLK ARHGAP23 chr17 38482678 + NLK chr17 28163543 + Exonic hg38 BRCA TCGA-BH-A1EV-01A 5 3 3'UTR-CDS Intra-chr q12 q11.2 CMGC:MAPK Seq+ 85703 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTA1-GRIP1 SPTA1 chr1 158661287 - GRIP1 chr12 66529914 - Exonic hg38 BRCA TCGA-BH-A1EV-01A 3 11 In-Frame Inter-chr q23.1 q14.3 Seq+ 85704 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPA-CISD3 COPA chr1 160323431 - CISD3 chr17 38730760 + Exonic hg38 BRCA TCGA-BH-A1EV-01A 3 6 CDS-3'UTR Inter-chr q23.2 Seq+ 85705 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP1B1-ABCA13 ATP1B1 chr1 169111498 + ABCA13 chr7 48219354 + Exonic hg38 BRCA TCGA-BH-A1EV-01A 1 10 Out-of-frame Inter-chr q24.2 p12.3 85706 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX52-TMIGD1 DDX52 chr17 37642110 - TMIGD1 chr17 30329529 - Exonic hg38 BRCA TCGA-BH-A1EV-01A 1 10 5'UTR-CDS Intra-chr q12 q11.2 Seq+ 85707 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSMD2-IFI44L CSMD2 chr1 33586504 - IFI44L chr1 78637032 + Exonic hg38 BRCA TCGA-BH-A1EV-01A 2 5 Out-of-frame Intra-chr p35.1 p31.1 Seq+ 85708 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM106A-TUBD1 TMEM106A chr17 43217312 + TUBD1 chr17 59886230 - Exonic hg38 BRCA TCGA-BH-A1EV-01A 2 3 Out-of-frame Intra-chr q21.31 q23.1 Seq+ 85709 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNJ2-MTUS2 SYNJ2 chr6 158069673 + MTUS2 chr13 29480150 + Exonic hg38 BRCA TCGA-BH-A1EV-01A 1 5 Out-of-frame Inter-chr q25.3 q12.3 85710 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST7L-CSMD2 ST7L chr1 112610841 - CSMD2 chr1 33587168 - Exonic hg38 BRCA TCGA-BH-A1EV-01A 1 3 In-Frame Intra-chr p13.2 p35.1 85711 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIAM2-CDK12 TIAM2 chr6 154944206 + CDK12 chr17 39544249 + Exonic hg38 BRCA TCGA-BH-A1EV-01A 1 3 Out-of-frame Inter-chr q25.2 q12 Oncogene 85712 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN8-MGST1 TSPAN8 chr12 71282716 - MGST1 chr12 16589528 + Exonic hg38 BRCA TCGA-BH-A1EV-01A 1 3 Out-of-frame Intra-chr q21.1 p12.3 85713 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-CLLU1OS FRS2 chr12 69569096 + CLLU1OS chr12 92422636 - Exonic hg38 BRCA TCGA-BH-A1EV-01A 1 2 Out-of-frame Intra-chr q15 q22 85714 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-SRCIN1 ERBB2 chr17 39715939 + SRCIN1 chr17 38543136 - Exonic hg38 BRCA TCGA-BH-A1EV-01A 1 1 5'UTR-5'UTR Intra-chr q12 Oncogene q12 85715 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT2-PDE3A CNOT2 chr12 70243480 + PDE3A chr12 20556660 + Exonic hg38 BRCA TCGA-BH-A1EW-01A 13 4 5'UTR-CDS Intra-chr q15 p12.2 Seq+ 85716 ChimerSeq TCGA FAWG TCGA_RNA-Seq THAP2-GRIP1 THAP2 chr12 71664580 + GRIP1 chr12 66541950 - Exonic hg38 BRCA TCGA-BH-A1EW-01A 1 6 Out-of-frame Intra-chr q21.1 Transcription factor q14.3 Seq+ 85717 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBL3-ZNF211 UBL3 chr13 29849512 - ZNF211 chr19 57640704 + Exonic hg38 BRCA TCGA-BH-A1EY-01A 38 66 Out-of-frame Inter-chr q12.3 q13.43 Transcription factor Seq+ 85718 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADD3-XPNPEP1 ADD3 chr10 110008299 + XPNPEP1 chr10 109893075 - Exonic hg38 BRCA TCGA-BH-A1EY-01A 20 31 5'UTR-5'UTR Intra-chr q25.1 q25.1 Seq+ 85719 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF552-UBL3 ZNF552 chr19 57813294 - UBL3 chr13 29777263 - Exonic hg38 BRCA TCGA-BH-A1EY-01A 5 13 Out-of-frame Inter-chr q13.43 Transcription factor q12.3 Seq+ 85720 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSCR3-BACH1 DSCR3 chr21 37267238 - BACH1 chr21 29270357 + Exonic hg38 BRCA TCGA-BH-A1EY-01A 2 20 Out-of-frame Intra-chr q22.13 q21.3 Transcription factor Seq+ 85721 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADK-PI4K2A ADK chr10 74200838 + PI4K2A chr10 97656285 + Exonic hg38 BRCA TCGA-BH-A1EY-01A 3 14 Out-of-frame Intra-chr q22.2 q24.2 Seq+ 85722 ChimerSeq TCGA FAWG TCGA_RNA-Seq HLCS-IL10RB HLCS chr21 36896860 - IL10RB chr21 33288104 + Exonic hg38 BRCA TCGA-BH-A1EY-01A 3 13 Out-of-frame Intra-chr q22.13 q22.11 Seq+ 85723 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTTG1IP-SIM2 PTTG1IP chr21 44873502 - SIM2 chr21 36709168 + Exonic hg38 BRCA TCGA-BH-A1EY-01A 4 9 In-Frame Intra-chr q22.3 q22.13 Transcription factor Seq+ 85724 ChimerSeq TCGA FAWG TCGA_RNA-Seq POFUT2-WDR4 POFUT2 chr21 45282349 - WDR4 chr21 42855780 - Exonic hg38 BRCA TCGA-BH-A1EY-01A 1 11 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 85725 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRK-C6orf203 PTPRK chr6 128520259 - C6orf203 chr6 107044260 + Exonic hg38 BRCA TCGA-BH-A1F0-01A 26 68 5'UTR-CDS Intra-chr Tumor suppressor gene q21 Seq+ 85726 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRF-GUCA2A PTPRF chr1 43553941 + GUCA2A chr1 42163610 - Exonic hg38 BRCA TCGA-BH-A1F0-01A 23 72 Out-of-frame Intra-chr p34.2 p34.2 Seq+ 85727 ChimerSeq TCGA FAWG TCGA_RNA-Seq CIC-ZFP57 CIC chr19 42287240 + ZFP57 chr6 29673758 - Exonic hg38 BRCA TCGA-BH-A1F0-01A 12 17 CDS-5'UTR Inter-chr q13.2 Oncogene Tumor suppressor gene Transcription factor p22.1 Transcription factor Seq+ 85728 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM117B-ATIC FAM117B chr2 202635788 + ATIC chr2 215312498 + Exonic hg38 BRCA TCGA-BH-A1F0-01A 6 13 In-Frame Intra-chr q33.2 q35 Seq+ 85729 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGF-ENPEP EGF chr4 109913462 + ENPEP chr4 110488541 + Exonic hg38 BRCA TCGA-BH-A1F0-01A 3 24 Out-of-frame Intra-chr q25 q25 Seq+ 85730 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPUL2-TTC9C HNRNPUL2 chr11 62726619 - TTC9C chr11 62735382 + Exonic hg38 BRCA TCGA-BH-A1F0-01A 5 10 In-Frame Intra-chr q12.3 q12.3 Seq+ 85731 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13B-AHI1 VPS13B chr8 99038566 + AHI1 chr6 135323324 - Exonic hg38 BRCA TCGA-BH-A1F0-01A 4 14 In-Frame Inter-chr q22.2 q23.3 Seq+ 85732 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D32-HBS1L TBC1D32 chr6 121279121 - HBS1L chr6 134993875 - Exonic hg38 BRCA TCGA-BH-A1F0-01A 3 11 In-Frame Intra-chr q22.31 q23.3 85733 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSME4-SLC22A16 PSME4 chr2 53874339 - SLC22A16 chr6 110457017 - Exonic hg38 BRCA TCGA-BH-A1F0-01A 4 3 Out-of-frame Inter-chr p16.2 q21 Seq+ 85734 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIVEP3-ASCC3 HIVEP3 chr1 41628749 - ASCC3 chr6 100607088 - Exonic hg38 BRCA TCGA-BH-A1F0-01A 2 10 5'UTR-CDS Inter-chr p34.2 Tumor suppressor gene Transcription factor q16.3 Seq+ 85735 ChimerSeq TCGA FAWG TCGA_RNA-Seq HBS1L-ARMC2 HBS1L chr6 134997397 - ARMC2 chr6 108876143 + Exonic hg38 BRCA TCGA-BH-A1F0-01A 1 6 In-Frame Intra-chr q23.3 q21 85736 ChimerSeq TCGA FAWG TCGA_RNA-Seq HPS3-JADE1 HPS3 chr3 149129940 + JADE1 chr4 128831733 + Exonic hg38 BRCA TCGA-BH-A1F0-01A 1 4 CDS-5'UTR Inter-chr q24 q28.2 85737 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCH1-SKIL PLCH1 chr3 155704146 - SKIL chr3 170359699 + Exonic hg38 BRCA TCGA-BH-A1F0-01A 1 4 CDS-5'UTR Intra-chr q25.31 q26.2 Tumor suppressor gene Transcription factor Seq+ 85738 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIP4K2B-KPNB1 PIP4K2B chr17 38767568 - KPNB1 chr17 47680020 + Exonic hg38 BRCA TCGA-BH-A1F2-01A 181 633 5'UTR-CDS Intra-chr q12 q21.32 Seq+ 85739 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADNP2-PQLC1 ADNP2 chr18 80117650 + PQLC1 chr18 79943462 - Exonic hg38 BRCA TCGA-BH-A1F2-01A 5 23 Out-of-frame Intra-chr q23 Transcription factor q23 Seq+ 85740 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEX2-GDPD1 TEX2 chr17 64263168 - GDPD1 chr17 59245414 + Exonic hg38 BRCA TCGA-BH-A1F2-01A 5 9 5'UTR-CDS Intra-chr q23.3 q22 Seq+ 85741 ChimerSeq TCGA FAWG TCGA_RNA-Seq EME1-ERBB2 EME1 chr17 50375512 + ERBB2 chr17 39726562 + Exonic hg38 BRCA TCGA-BH-A1F2-01A 1 3 In-Frame Intra-chr q21.33 q12 Oncogene 85742 ChimerSeq TCGA FAWG TCGA_RNA-Seq STXBP4-NIPA2 STXBP4 chr17 55081183 + NIPA2 chr15 22858540 + Exonic hg38 BRCA TCGA-BH-A1F2-01A 1 1 In-Frame Inter-chr q22 q11.2 85743 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV6-CLEC2B ETV6 chr12 11886026 + CLEC2B chr12 9862573 - Exonic hg38 BRCA TCGA-BH-A1F5-01A 1 2 CDS-5'UTR Intra-chr p13.2 Tumor suppressor gene Transcription factor p13.31 85744 ChimerSeq TCGA FAWG TCGA_RNA-Seq GYS1-EML2 GYS1 chr19 48982255 - EML2 chr19 45613671 - Exonic hg38 BRCA TCGA-BH-A1F6-01A 131 382 Out-of-frame Intra-chr q13.33 q13.32 Seq+ 85745 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM1-PTPRK PUM1 chr1 31006994 - PTPRK chr6 128322310 - Exonic hg38 BRCA TCGA-BH-A1F6-01A 4 46 CDS-5'UTR Inter-chr p35.2 Tumor suppressor gene Seq+ 85746 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM4-TAF6 TRIM4 chr7 99903218 - TAF6 chr7 100110073 - Exonic hg38 BRCA TCGA-BH-A1F6-01A 6 28 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 85747 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTBN4-C19orf47 SPTBN4 chr19 40520151 + C19orf47 chr19 40336407 - Exonic hg38 BRCA TCGA-BH-A1F6-01A 6 16 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 85748 ChimerSeq TCGA FAWG TCGA_RNA-Seq AURKB-MYH10 AURKB chr17 8210530 - MYH10 chr17 8548787 - Exonic hg38 BRCA TCGA-BH-A1F6-01A 7 4 5'UTR-CDS Intra-chr p13.1 Oncogene p13.1 Seq+ 85749 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC37A3-GNA13 LRRC37A3 chr17 64918750 - GNA13 chr17 65018303 - Exonic hg38 BRCA TCGA-BH-A1F6-01A 3 18 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 85750 ChimerSeq TCGA FAWG TCGA_RNA-Seq PELI1-APLF PELI1 chr2 64144081 - APLF chr2 68567341 + Exonic hg38 BRCA TCGA-BH-A1F6-01A 3 4 5'UTR-CDS Intra-chr p14 p13.3 Seq+ 85751 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOS1AP-DARS2 NOS1AP chr1 162154476 + DARS2 chr1 173826687 + Exonic hg38 BRCA TCGA-BH-A1F6-01A 1 3 Out-of-frame Intra-chr q23.3 q25.1 85752 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPNPEP3-SGSM3 XPNPEP3 chr22 40870139 + SGSM3 chr22 40400696 + Exonic hg38 BRCA TCGA-BH-A1F6-01A 1 3 CDS-5'UTR Intra-chr q13.2 q13.1 85753 ChimerSeq TCGA FAWG TCGA_RNA-Seq NECTIN4-PFDN2 NECTIN4 chr1 161077453 - PFDN2 chr1 161100859 - Exonic hg38 BRCA TCGA-BH-A1F6-01A 1 2 Out-of-frame Intra-chr q23.3 q23.3 85754 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM208B-NET1 FAM208B chr10 5685175 + NET1 chr10 5426655 + Exonic hg38 BRCA TCGA-BH-A1F6-01A 1 1 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 85755 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLG1-COG4 GLG1 chr16 74606657 - COG4 chr16 70519731 - Exonic hg38 BRCA TCGA-BH-A1F8-01A 24 69 In-Frame Intra-chr q23.1 q22.1 Seq+ 85756 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD3-SNX20 NSD3 chr8 38381799 - SNX20 chr16 50677535 - Exonic hg38 BRCA TCGA-BH-A1FB-01A 36 54 5'UTR-5'UTR Inter-chr p11.23 Tumor suppressor gene q12.1 85757 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTBP2-KAZN PTBP2 chr1 96723594 + KAZN chr1 15034749 + Exonic hg38 BRCA TCGA-BH-A1FC-01A 55 132 Out-of-frame Intra-chr p21.3 p36.21 Seq+ 85758 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF11-TMEM61 RNF11 chr1 51236879 + TMEM61 chr1 54991836 + Exonic hg38 BRCA TCGA-BH-A1FC-01A 19 140 Out-of-frame Intra-chr p32.3 p32.3 Seq+ 85759 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRU-IGHJ6 PTPRU chr1 29320779 + IGHJ6 chr14 105863256 - Exonic hg38 BRCA TCGA-BH-A1FC-01A 41 0 Out-of-frame Inter-chr p35.3 85760 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAF1-NFIA FAF1 chr1 50959767 - NFIA chr1 61352450 + Exonic hg38 BRCA TCGA-BH-A1FC-01A 10 12 Out-of-frame Intra-chr p32.3 p31.3 Transcription factor Seq+ 85761 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST3GAL3-TAL1 ST3GAL3 chr1 43838311 + TAL1 chr1 47220174 - Exonic hg38 BRCA TCGA-BH-A1FC-01A 5 21 Out-of-frame Intra-chr p34.1 p33 Oncogene Transcription factor Seq+ 85762 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACHD1-CLIC4 CACHD1 chr1 64470942 + CLIC4 chr1 24797742 + Exonic hg38 BRCA TCGA-BH-A1FC-01A 4 14 In-Frame Intra-chr p31.3 p36.11 Seq+ 85763 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALG14-C1orf194 ALG14 chr1 95027129 - C1orf194 chr1 109106659 - Exonic hg38 BRCA TCGA-BH-A1FC-01A 4 7 Out-of-frame Intra-chr p21.3 p13.3 Seq+ 85764 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAZN-ST3GAL3 KAZN chr1 14960875 + ST3GAL3 chr1 43894383 + Exonic hg38 BRCA TCGA-BH-A1FC-01A 1 16 Out-of-frame Intra-chr p36.21 p34.1 Seq+ 85765 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGAPB-RPRD1B RALGAPB chr20 38516370 + RPRD1B chr20 38066081 + Exonic hg38 BRCA TCGA-BH-A1FC-01A 2 10 In-Frame Intra-chr q11.23 q11.23 Seq+ 85766 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLF16-RNF126 KLF16 chr19 1863041 - RNF126 chr19 652884 - Exonic hg38 BRCA TCGA-BH-A1FC-01A 2 3 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 85767 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYTL2-TMEM135 SYTL2 chr11 85757625 - TMEM135 chr11 87295782 + Exonic hg38 BRCA TCGA-BH-A1FD-01A 18 71 In-Frame Intra-chr q14.1 q14.2 Seq+ 85768 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYRK1A-MRPS6 DYRK1A chr21 37486614 + MRPS6 chr21 34125341 + Exonic hg38 BRCA TCGA-BH-A1FD-01A 17 61 Out-of-frame Intra-chr q22.13 CMGC:DYRK q22.11 Seq+ 85769 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2B-KYAT3 GTF2B chr1 88887261 - KYAT3 chr1 88936245 - Exonic hg38 BRCA TCGA-BH-A1FD-01A 13 73 Out-of-frame Intra-chr p22.2 Transcription factor p22.2 85770 ChimerSeq TCGA FAWG TCGA_RNA-Seq COLGALT1-BISPR COLGALT1 chr19 17560465 + BISPR chr19 17414391 + Exonic hg38 BRCA TCGA-BH-A1FD-01A 17 41 CDS-5'UTR Intra-chr p13.11 p13.11 85771 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKNK2-ZFR2 MKNK2 chr19 2046367 - ZFR2 chr19 3852614 - Exonic hg38 BRCA TCGA-BH-A1FD-01A 15 23 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 85772 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCPH1-COLEC10 MCPH1 chr8 6414883 + COLEC10 chr8 119089680 + Exonic hg38 BRCA TCGA-BH-A1FD-01A 8 45 Out-of-frame Intra-chr p23.1 Tumor suppressor gene q24.12 Seq+ 85773 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD2-TACC3 NSD2 chr4 1904378 + TACC3 chr4 1740826 + Exonic hg38 BRCA TCGA-BH-A1FD-01A 9 38 In-Frame Intra-chr p16.3 p16.3 85774 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUSD4-RYR2 SUSD4 chr1 223363278 - RYR2 chr1 237500711 + Exonic hg38 BRCA TCGA-BH-A1FD-01A 9 22 CDS-5'UTR Intra-chr q41 q43 Seq+ 85775 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK7-CCNB1 CDK7 chr5 69235453 + CCNB1 chr5 69167908 + Exonic hg38 BRCA TCGA-BH-A1FD-01A 4 40 3'UTR-CDS Intra-chr CMGC:CDK q13.2 Seq+ 85776 ChimerSeq TCGA FAWG TCGA_RNA-Seq RP1-EIF3H RP1 chr8 54559320 + EIF3H chr8 116658980 - Exonic hg38 BRCA TCGA-BH-A1FD-01A 9 20 5'UTR-CDS Intra-chr q11.23 q24.11 85777 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLGA7-PVT1 GOLGA7 chr8 41490965 + PVT1 chr8 127989162 + Exonic hg38 BRCA TCGA-BH-A1FD-01A 10 12 5'UTR-5'UTR Intra-chr p11.21 q24.21 Seq+ 85778 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF19A-RIDA RNF19A chr8 100313291 - RIDA chr8 98108751 - Exonic hg38 BRCA TCGA-BH-A1FD-01A 8 12 5'UTR-CDS Intra-chr q22.2 q22.2 85779 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESR1-POLH ESR1 chr6 152011794 + POLH chr6 43582316 + Exonic hg38 BRCA TCGA-BH-A1FD-01A 4 20 CDS-5'UTR Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor p21.1 Seq+ 85780 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCSTN-ATP1A4 NCSTN chr1 160344826 + ATP1A4 chr1 160176092 + Exonic hg38 BRCA TCGA-BH-A1FD-01A 4 16 In-Frame Intra-chr q23.2 q23.2 Seq+ 85781 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-KHDRBS3 PVT1 chr8 127890998 + KHDRBS3 chr8 135646993 + Exonic hg38 BRCA TCGA-BH-A1FD-01A 2 24 5'UTR-CDS Intra-chr q24.21 q24.23 Seq+ 85782 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13B-EFR3A VPS13B chr8 99193057 + EFR3A chr8 131940499 + Exonic hg38 BRCA TCGA-BH-A1FD-01A 3 16 In-Frame Intra-chr q22.2 q24.22 Seq+ 85783 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBIN-PPWD1 ERBIN chr5 65926806 + PPWD1 chr5 65576879 + Exonic hg38 BRCA TCGA-BH-A1FD-01A 4 10 5'UTR-CDS Intra-chr q12.3 q12.3 85784 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPAL2-RNF19A NIPAL2 chr8 98203108 - RNF19A chr8 100313372 - Exonic hg38 BRCA TCGA-BH-A1FD-01A 1 22 CDS-5'UTR Intra-chr q22.2 q22.2 Seq+ 85785 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDOA-ASPHD1 ALDOA chr16 30067661 + ASPHD1 chr16 29919531 + Exonic hg38 BRCA TCGA-BH-A1FD-01A 2 15 CDS-3'UTR Intra-chr p11.2 p11.2 Seq+ 85786 ChimerSeq TCGA FAWG TCGA_RNA-Seq UTRN-PARK2 UTRN chr6 144730486 + PARK2 chr6 162262765 - Exonic hg38 BRCA TCGA-BH-A1FD-01A 4 7 Out-of-frame Intra-chr q24.2 Tumor suppressor gene Seq+ 85787 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCL-ARMC9 NCL chr2 231482684 - ARMC9 chr2 231331793 + Exonic hg38 BRCA TCGA-BH-A1FD-01A 1 17 5'UTR-5'UTR Intra-chr q37.1 q37.1 85788 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF542P-NLRP8 ZNF542P chr19 56373623 + NLRP8 chr19 55979394 + Exonic hg38 BRCA TCGA-BH-A1FD-01A 2 13 5'UTR-CDS Intra-chr q13.43 q13.43 85789 ChimerSeq TCGA FAWG TCGA_RNA-Seq COLGALT1-MVB12A COLGALT1 chr19 17560465 + MVB12A chr19 17420313 + Exonic hg38 BRCA TCGA-BH-A1FD-01A 2 12 In-Frame Intra-chr p13.11 p13.11 Seq+ 85790 ChimerSeq TCGA FAWG TCGA_RNA-Seq PANK1-C8orf34 PANK1 chr10 89643697 - C8orf34 chr8 68708994 + Exonic hg38 BRCA TCGA-BH-A1FD-01A 2 8 Out-of-frame Inter-chr q23.31 q13.2 Seq+ 85791 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD83-LAMA2 CD83 chr6 14118065 + LAMA2 chr6 129342343 + Exonic hg38 BRCA TCGA-BH-A1FD-01A 2 7 In-Frame Intra-chr p23 q22.33 Seq+ 85792 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTR1A-ARL3 ACTR1A chr10 102502600 - ARL3 chr10 102676941 - Exonic hg38 BRCA TCGA-BH-A1FD-01A 1 9 In-Frame Intra-chr q24.32 q24.32 85793 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMPR2-FAM117B BMPR2 chr2 202377550 + FAM117B chr2 202724917 + Exonic hg38 BRCA TCGA-BH-A1FD-01A 1 6 3'UTR-CDS Intra-chr q33.1 TKL:STKR Tumor suppressor gene q33.2 85794 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2K-KLB UBE2K chr4 39774933 + KLB chr4 39434210 + Exonic hg38 BRCA TCGA-BH-A1FD-01A 1 6 In-Frame Intra-chr p14 p14 85795 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTU2-MLYCD CTU2 chr16 88712905 + MLYCD chr16 83912218 + Exonic hg38 BRCA TCGA-BH-A1FD-01A 2 1 Out-of-frame Intra-chr q24.3 q23.3 85796 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOP58-KIAA2012 NOP58 chr2 202278002 + KIAA2012 chr2 202125214 + Exonic hg38 BRCA TCGA-BH-A1FD-01A 1 5 In-Frame Intra-chr q33.1 q33.1 85797 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASXL1-XKR7 ASXL1 chr20 32369123 + XKR7 chr20 31995068 + Exonic hg38 BRCA TCGA-BH-A1FD-01A 1 4 Out-of-frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 85798 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPIP5K1-FRMD5 PPIP5K1 chr15 43576371 - FRMD5 chr15 43924309 - Exonic hg38 BRCA TCGA-BH-A1FD-01A 2 0 In-Frame Intra-chr q15.3 q15.3 Seq+ 85799 ChimerSeq TCGA FAWG TCGA_RNA-Seq LARP4B-ADARB2 LARP4B chr10 842932 - ADARB2 chr10 1217119 - Exonic hg38 BRCA TCGA-BH-A1FD-01A 1 3 In-Frame Intra-chr p15.3 p15.3 Seq+ 85800 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNE1-RGS17 SYNE1 chr6 152301869 - RGS17 chr6 153011762 - Exonic hg38 BRCA TCGA-BH-A1FD-01A 1 2 In-Frame Intra-chr q25.2 Oncogene q25.2 Seq+ 85801 ChimerSeq TCGA FAWG TCGA_RNA-Seq WASF2-FGR WASF2 chr1 27428761 - FGR chr1 27613350 - Exonic hg38 BRCA TCGA-BH-A1FD-01A 1 2 In-Frame Intra-chr p36.11 p35.3 TK:Src Seq+ 85802 ChimerSeq TCGA FAWG TCGA_RNA-Seq PMEPA1-PIGP PMEPA1 chr20 57709474 - PIGP chr21 37072537 - Exonic hg38 BRCA TCGA-BH-A1FE-01A 42 95 CDS-5'UTR Inter-chr q13.31 q22.13 Seq+ 85803 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDLR-TNPO2 LDLR chr19 11129670 + TNPO2 chr19 12723937 - Exonic hg38 BRCA TCGA-BH-A1FE-01A 9 52 CDS-5'UTR Intra-chr p13.2 p13.13 Seq+ 85804 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDSS2-SMARCA4 PDSS2 chr6 107458990 - SMARCA4 chr19 10984124 + Exonic hg38 BRCA TCGA-BH-A1FE-01A 4 66 CDS-5'UTR Inter-chr q21 Tumor suppressor gene p13.2 Oncogene Tumor suppressor gene Seq+ 85805 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTK2-NCR3 PTK2 chr8 140818277 - NCR3 chr6 31592914 - Exonic hg38 BRCA TCGA-BH-A1FE-01A 7 18 5'UTR-5'UTR Inter-chr q24.3 Seq+ 85806 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC63-SCML4 SEC63 chr6 107957886 - SCML4 chr6 107749813 - Exonic hg38 BRCA TCGA-BH-A1FE-01A 3 22 Out-of-frame Intra-chr q21 q21 Transcription factor Seq+ 85807 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR3E-RMI2 POLR3E chr16 22332185 + RMI2 chr16 11350642 + Exonic hg38 BRCA TCGA-BH-A1FE-01A 2 22 5'UTR-5'UTR Intra-chr p13.13 Seq+ 85808 ChimerSeq TCGA FAWG TCGA_RNA-Seq C6orf203-BEND3 C6orf203 chr6 107040230 + BEND3 chr6 107070950 - Exonic hg38 BRCA TCGA-BH-A1FE-01A 5 9 Out-of-frame Intra-chr q21 q21 Seq+ 85809 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXP1-C5orf51 FOXP1 chr3 71299820 - C5orf51 chr5 41907736 + Exonic hg38 BRCA TCGA-BH-A1FE-01A 3 6 5'UTR-CDS Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor p13.1 Seq+ 85810 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIN-NEMF NIN chr14 50806737 - NEMF chr14 49825955 - Exonic hg38 BRCA TCGA-BH-A1FE-01A 2 7 Out-of-frame Intra-chr q22.1 Oncogene q21.3 Seq+ 85811 ChimerSeq TCGA FAWG TCGA_RNA-Seq STON2-TJP2 STON2 chr14 81427102 - TJP2 chr9 69212548 + Exonic hg38 BRCA TCGA-BH-A1FE-01A 3 3 5'UTR-5'UTR Inter-chr q31.1 q21.11 Seq+ 85812 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCML4-TUSC3 SCML4 chr6 107772172 - TUSC3 chr8 15623080 + Exonic hg38 BRCA TCGA-BH-A1FE-01A 2 3 In-Frame Inter-chr q21 Transcription factor p22 Seq+ 85813 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPC1-PXT1 MPC1 chr6 166382806 - PXT1 chr6 36391874 - Exonic hg38 BRCA TCGA-BH-A1FG-01A 1 5 Out-of-frame Intra-chr q27 p21.31 85814 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF16B-PLCB1 KIF16B chr20 16573229 - PLCB1 chr20 8684932 + Exonic hg38 BRCA TCGA-BH-A1FH-01A 9 51 Out-of-frame Intra-chr p12.1 p12.3 Seq+ 85815 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM104A-SLC39A11 FAM104A chr17 73227165 - SLC39A11 chr17 73031714 - Exonic hg38 BRCA TCGA-BH-A1FH-01A 6 20 In-Frame Intra-chr q25.1 q25.1 Seq+ 85816 ChimerSeq TCGA FAWG TCGA_RNA-Seq OLA1-METTL8 OLA1 chr2 174223033 - METTL8 chr2 171360513 - Exonic hg38 BRCA TCGA-BH-A1FH-01A 3 5 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 85817 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCB4-BMP2 PLCB4 chr20 9068903 + BMP2 chr20 6770120 + Exonic hg38 BRCA TCGA-BH-A1FH-01A 1 4 5'UTR-3'UTR Intra-chr p12.3 p12.3 Tumor suppressor gene Seq+ 85818 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANSL3-KCNIP3 KANSL3 chr2 96619359 - KCNIP3 chr2 95298683 + Exonic hg38 BRCA TCGA-BH-A1FH-01A 1 3 5'UTR-5'UTR Intra-chr q11.2 q11.1 Transcription factor 85819 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLG1-TM4SF19 DLG1 chr3 197282679 - TM4SF19 chr3 196327591 - Exonic hg38 BRCA TCGA-BH-A1FL-01A 25 50 CDS-5'UTR Intra-chr q29 Tumor suppressor gene q29 Seq+ 85820 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANXA10-FAM198B ANXA10 chr4 168128165 + FAM198B chr4 158131012 - Exonic hg38 BRCA TCGA-BH-A1FL-01A 1 4 Out-of-frame Intra-chr q32.3 q32.1 Seq+ 85821 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB43-PITPNC1 ZBTB43 chr9 126808915 + PITPNC1 chr17 67532802 + Exonic hg38 BRCA TCGA-BH-A1FM-01A 83 159 5'UTR-CDS Inter-chr q33.3 Transcription factor q24.2 Seq+ 85822 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNK-CCDC171 CCNK chr14 99503644 + CCDC171 chr9 15920270 + Exonic hg38 BRCA TCGA-BH-A1FM-01A 8 64 Out-of-frame Inter-chr q32.2 p22.3 Seq+ 85823 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANSL1-DYNLL2 KANSL1 chr17 46223671 - DYNLL2 chr17 58087082 + Exonic hg38 BRCA TCGA-BH-A1FM-01A 6 40 5'UTR-5'UTR Intra-chr q22 Seq+ 85824 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPI1-MRPL45P2 WIPI1 chr17 68433470 - MRPL45P2 chr17 47456795 - Exonic hg38 BRCA TCGA-BH-A1FM-01A 10 23 Out-of-frame Intra-chr q24.2 q21.32 85825 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNJ3-GALNT13 KCNJ3 chr2 154709819 + GALNT13 chr2 154395991 + Exonic hg38 BRCA TCGA-BH-A1FM-01A 7 15 In-Frame Intra-chr q24.1 q23.3 Seq+ 85826 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRSF1-SKA2 SRSF1 chr17 58006944 - SKA2 chr17 59112345 - Exonic hg38 BRCA TCGA-BH-A1FM-01A 6 10 In-Frame Intra-chr q22 q22 Seq+ 85827 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBD1-HEATR6 TUBD1 chr17 59890831 - HEATR6 chr17 60050977 - Exonic hg38 BRCA TCGA-BH-A1FM-01A 4 17 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 85828 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASXL1-PDRG1 ASXL1 chr20 32369123 + PDRG1 chr20 31948882 - Exonic hg38 BRCA TCGA-BH-A1FM-01A 3 13 Out-of-frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 85829 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13-ABCA9 MED13 chr17 61961588 - ABCA9 chr17 69029227 - Exonic hg38 BRCA TCGA-BH-A1FM-01A 3 10 Out-of-frame Intra-chr q23.2 q24.2 Seq+ 85830 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNG4-BPTF CACNG4 chr17 66965131 + BPTF chr17 67891844 + Exonic hg38 BRCA TCGA-BH-A1FM-01A 4 4 In-Frame Intra-chr q24.2 q24.2 Transcription factor 85831 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPC-TTC39B HNRNPC chr14 21210247 - TTC39B chr9 15192695 - Exonic hg38 BRCA TCGA-BH-A1FM-01A 3 8 3'UTR-CDS Inter-chr q11.2 p22.3 Seq+ 85832 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR181A2HG-MAPKAP1 MIR181A2HG chr9 124658741 + MAPKAP1 chr9 125672643 - Exonic hg38 BRCA TCGA-BH-A1FM-01A 3 8 5'UTR-5'UTR Intra-chr q33.3 q33.3 Seq+ 85833 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNC1-EXOC3L4 PITPNC1 chr17 67632238 + EXOC3L4 chr14 103100204 + Exonic hg38 BRCA TCGA-BH-A1FM-01A 3 5 CDS-5'UTR Inter-chr q24.2 q32.32 85834 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC39B-SPTSSA TTC39B chr9 15182307 - SPTSSA chr14 34435304 - Exonic hg38 BRCA TCGA-BH-A1FM-01A 1 10 In-Frame Inter-chr p22.3 q13.1 85835 ChimerSeq TCGA FAWG TCGA_RNA-Seq C20orf196-CST4 C20orf196 chr20 5756848 + CST4 chr20 23685977 - Exonic hg38 BRCA TCGA-BH-A1FM-01A 2 5 Out-of-frame Intra-chr p12.3 p11.21 Seq+ 85836 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF839-LMX1B ZNF839 chr14 102317666 + LMX1B chr9 126690836 + Exonic hg38 BRCA TCGA-BH-A1FM-01A 2 2 5'UTR-CDS Inter-chr q32.31 q33.3 Transcription factor 85837 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS2-OXCT1 ADAMTS2 chr5 179152142 - OXCT1 chr5 41739491 - Exonic hg38 BRCA TCGA-BH-A1FM-01A 2 1 In-Frame Intra-chr p13.1 85838 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAP1L1-STK38L NAP1L1 chr12 76084567 - STK38L chr12 27297710 + Exonic hg38 BRCA TCGA-BH-A1FN-01A 15 25 5'UTR-5'UTR Intra-chr q21.2 p11.23 Seq+ 85839 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLG5-ANAPC16 DLG5 chr10 77926217 - ANAPC16 chr10 72230366 + Exonic hg38 BRCA TCGA-BH-A1FN-01A 3 12 5'UTR-5'UTR Intra-chr q22.3 q22.1 Seq+ 85840 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP42-SLC46A2 USP42 chr7 6115523 + SLC46A2 chr9 112887413 - Exonic hg38 BRCA TCGA-BH-A1FN-01A 2 9 In-Frame Inter-chr p22.1 q32 Seq+ 85841 ChimerSeq TCGA FAWG TCGA_RNA-Seq P4HA1-ANK3 P4HA1 chr10 73072029 - ANK3 chr10 60279639 - Exonic hg38 BRCA TCGA-BH-A1FN-01A 2 5 Out-of-frame Intra-chr q22.1 q21.2 Seq+ 85842 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D9-MAML3 TBC1D9 chr4 140701504 - MAML3 chr4 139890967 - Exonic hg38 BRCA TCGA-BH-A1FN-01A 2 3 Out-of-frame Intra-chr q31.21 q31.1 85843 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOM1L2-PEMT TOM1L2 chr17 17866296 - PEMT chr17 17512654 - Exonic hg38 BRCA TCGA-BH-A1FU-01A 5 3 Out-of-frame Intra-chr p11.2 Tumor suppressor gene p11.2 Seq+ 85844 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCLAF-TRIP4 PCLAF chr15 64380958 - TRIP4 chr15 64406330 + Exonic hg38 BRCA TCGA-BH-A1FU-01A 2 8 In-Frame Intra-chr q22.31 q22.31 85845 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF12-KIF24 DCAF12 chr9 34093286 - KIF24 chr9 34263172 - Exonic hg38 BRCA TCGA-BH-A1FU-01A 1 4 Out-of-frame Intra-chr p13.3 p13.3 85846 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYTL2-CHRM1 SYTL2 chr11 85700515 - CHRM1 chr11 62911178 - Exonic hg38 BRCA TCGA-BH-A201-01A 23 343 CDS-5'UTR Intra-chr q14.1 q12.3 Seq+ 85847 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCF11-KDM2A PCF11 chr11 83157631 + KDM2A chr11 67207510 + Exonic hg38 BRCA TCGA-BH-A201-01A 41 126 Out-of-frame Intra-chr q14.1 q13.2 Transcription factor Seq+ 85848 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCHSD2-RNF169 FCHSD2 chr11 72902543 - RNF169 chr11 74789626 + Exonic hg38 BRCA TCGA-BH-A201-01A 12 44 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 85849 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL48-TPCN2 MRPL48 chr11 73787992 + TPCN2 chr11 69135435 + Exonic hg38 BRCA TCGA-BH-A201-01A 6 47 CDS-3'UTR Intra-chr q13.4 q13.3 85850 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK1-MYO7A PAK1 chr11 77473552 - MYO7A chr11 77130589 + Exonic hg38 BRCA TCGA-BH-A201-01A 7 17 5'UTR-5'UTR Intra-chr q14.1 STE:STE20 q13.5 Seq+ 85851 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEU3-SNTG1 NEU3 chr11 75005625 + SNTG1 chr8 50590879 + Exonic hg38 BRCA TCGA-BH-A201-01A 5 11 In-Frame Inter-chr q13.4 q11.21 Seq+ 85852 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT6A-MSR1 KAT6A chr8 42048378 - MSR1 chr8 16177992 - Exonic hg38 BRCA TCGA-BH-A202-01A 24 91 Out-of-frame Intra-chr p11.21 Oncogene p22 Seq+ 85853 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXDC1-STAC2 PLXDC1 chr17 39151362 - STAC2 chr17 39218173 - Exonic hg38 BRCA TCGA-BH-A202-01A 1 14 Out-of-frame Intra-chr q12 q12 85854 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFWD2-KIF14 RFWD2 chr1 176149006 - KIF14 chr1 200608928 - Exonic hg38 BRCA TCGA-BH-A203-01A 3 251 Out-of-frame Intra-chr q25.2 Tumor suppressor gene q32.1 Seq+ 85855 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC2-TRDN HDAC2 chr6 113970857 - TRDN chr6 123224131 - Exonic hg38 BRCA TCGA-BH-A203-01A 27 48 In-Frame Intra-chr q21 q22.31 Seq+ 85856 ChimerSeq TCGA FAWG TCGA_RNA-Seq NBPF17P-FMN2 NBPF17P chr1 143635509 - FMN2 chr1 240355816 + Exonic hg38 BRCA TCGA-BH-A203-01A 18 43 Out-of-frame Intra-chr q21.1 q43 85857 ChimerSeq TCGA FAWG TCGA_RNA-Seq FIG4-WASF1 FIG4 chr6 109777060 + WASF1 chr6 110103557 - Exonic hg38 BRCA TCGA-BH-A203-01A 14 20 In-Frame Intra-chr q21 q21 Seq+ 85858 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCB1-GPCPD1 PLCB1 chr20 8150371 + GPCPD1 chr20 5604440 - Exonic hg38 BRCA TCGA-BH-A203-01A 15 12 CDS-5'UTR Intra-chr p12.3 p12.3 Seq+ 85859 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIMM17A-RASSF5 TIMM17A chr1 201957574 + RASSF5 chr1 206538172 + Exonic hg38 BRCA TCGA-BH-A203-01A 8 25 In-Frame Intra-chr q32.1 q32.1 Tumor suppressor gene Seq+ 85860 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADSS-SERTAD4 ADSS chr1 244420170 - SERTAD4 chr1 210237944 + Exonic hg38 BRCA TCGA-BH-A203-01A 4 37 CDS-3'UTR Intra-chr q44 Seq+ 85861 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KC1-C1orf101 RPS6KC1 chr1 213104569 + C1orf101 chr1 244552322 + Exonic hg38 BRCA TCGA-BH-A203-01A 3 27 Out-of-frame Intra-chr q32.3 Seq+ 85862 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPS1-PDE4DIP TRPS1 chr8 115587001 - PDE4DIP chr1 148968836 + Exonic hg38 BRCA TCGA-BH-A203-01A 7 7 In-Frame Inter-chr q23.3 Transcription factor q21.2 Oncogene Seq+ 85863 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCB1-TRMT6 PLCB1 chr20 8729174 + TRMT6 chr20 5941139 - Exonic hg38 BRCA TCGA-BH-A203-01A 1 21 Out-of-frame Intra-chr p12.3 p12.3 85864 ChimerSeq TCGA FAWG TCGA_RNA-Seq FERMT1-RBBP8 FERMT1 chr20 6094939 - RBBP8 chr18 23026143 + Exonic hg38 BRCA TCGA-BH-A203-01A 1 14 Out-of-frame Inter-chr p12.3 q11.2 Tumor suppressor gene Seq+ 85865 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS21-CA14 MRPS21 chr1 150294449 + CA14 chr1 150264593 + Exonic hg38 BRCA TCGA-BH-A203-01A 3 6 In-Frame Intra-chr q21.2 q21.2 Seq+ 85866 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA2-NCALD NCOA2 chr8 70213903 - NCALD chr8 101719648 - Exonic hg38 BRCA TCGA-BH-A203-01A 2 5 5'UTR-5'UTR Intra-chr q13.3 Oncogene Transcription factor q22.3 Seq+ 85867 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAD2-FAM178B ATAD2 chr8 123333878 - FAM178B chr2 96929320 - Exonic hg38 BRCA TCGA-BH-A203-01A 1 5 In-Frame Inter-chr q24.13 q11.2 Seq+ 85868 ChimerSeq TCGA FAWG TCGA_RNA-Seq GINS2-EMC8 GINS2 chr16 85681582 - EMC8 chr16 85771891 - Exonic hg38 BRCA TCGA-BH-A203-01A 1 4 CDS-3'UTR Intra-chr q24.1 q24.1 85869 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRHL2-SNAP25 GRHL2 chr8 101599151 + SNAP25 chr20 10275429 + Exonic hg38 BRCA TCGA-BH-A203-01A 1 3 CDS-5'UTR Inter-chr q22.3 Transcription factor p12.2 85870 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM8A-FCAMR RBM8A chr1 145925863 - FCAMR chr1 206959797 - Exonic hg38 BRCA TCGA-BH-A203-01A 1 2 3'UTR-CDS Intra-chr q21.1 q32.1 85871 ChimerSeq TCGA FAWG TCGA_RNA-Seq FXR1-ZFYVE16 FXR1 chr3 180912736 + ZFYVE16 chr5 80472761 + Exonic hg38 BRCA TCGA-BH-A203-01A 1 1 Out-of-frame Inter-chr q26.33 q14.1 85872 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE4DIP-C1orf186 PDE4DIP chr1 148969030 + C1orf186 chr1 206101752 + Exonic hg38 BRCA TCGA-BH-A203-01A 1000 1000 Out-of-frame Intra-chr q21.2 Oncogene q32.1 Seq+ 85873 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF122-NEGR1 RNF122 chr8 33566699 - NEGR1 chr1 71407570 - Exonic hg38 BRCA TCGA-BH-A204-01A 7 63 In-Frame Inter-chr p12 p31.1 Seq+ 85874 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELSR2-SARS CELSR2 chr1 109273670 + SARS chr1 109237731 + Exonic hg38 BRCA TCGA-BH-A208-01A 16 44 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 85875 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL3-GABRG3 OSBPL3 chr7 24979886 - GABRG3 chr15 27480650 + Exonic hg38 BRCA TCGA-BH-A208-01A 1 6 5'UTR-CDS Inter-chr p15.3 q12 Seq+ 85876 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC39A-CRISP1 TTC39A chr1 51294391 - CRISP1 chr6 49852129 - Exonic hg38 BRCA TCGA-BH-A209-01A 37 528 In-Frame Inter-chr p32.3 p12.3 Seq+ 85877 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDS5B-UBR2 PDS5B chr13 32586593 + UBR2 chr6 42691032 + Exonic hg38 BRCA TCGA-BH-A209-01A 107 111 5'UTR-CDS Inter-chr q13.1 Tumor suppressor gene p21.1 Seq+ 85878 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKHD1-PCDHGA10 ANKHD1 chr5 140487060 + PCDHGA10 chr5 141505393 + Exonic hg38 BRCA TCGA-BH-A209-01A 23 87 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 85879 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKHD1-PCDHGA11 ANKHD1 chr5 140487060 + PCDHGA11 chr5 141505393 + Exonic hg38 BRCA TCGA-BH-A209-01A 23 87 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 85880 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKHD1-PCDHGA12 ANKHD1 chr5 140487060 + PCDHGA12 chr5 141505393 + Exonic hg38 BRCA TCGA-BH-A209-01A 23 87 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 85881 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKHD1-PCDHGA8 ANKHD1 chr5 140487060 + PCDHGA8 chr5 141505393 + Exonic hg38 BRCA TCGA-BH-A209-01A 23 87 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 85882 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKHD1-PCDHGA9 ANKHD1 chr5 140487060 + PCDHGA9 chr5 141505393 + Exonic hg38 BRCA TCGA-BH-A209-01A 23 87 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 85883 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKHD1-PCDHGB5 ANKHD1 chr5 140487060 + PCDHGB5 chr5 141505393 + Exonic hg38 BRCA TCGA-BH-A209-01A 23 87 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 85884 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKHD1-PCDHGB6 ANKHD1 chr5 140487060 + PCDHGB6 chr5 141505393 + Exonic hg38 BRCA TCGA-BH-A209-01A 23 87 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 85885 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKHD1-PCDHGB7 ANKHD1 chr5 140487060 + PCDHGB7 chr5 141505393 + Exonic hg38 BRCA TCGA-BH-A209-01A 23 87 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 85886 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKHD1-PCDHGC3 ANKHD1 chr5 140487060 + PCDHGC3 chr5 141505393 + Exonic hg38 BRCA TCGA-BH-A209-01A 23 87 Out-of-frame Intra-chr q31.3 q31.3 Tumor suppressor gene Seq+ 85887 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKHD1-PCDHGC4 ANKHD1 chr5 140487060 + PCDHGC4 chr5 141505393 + Exonic hg38 BRCA TCGA-BH-A209-01A 23 87 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 85888 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKHD1-PCDHGC5 ANKHD1 chr5 140487060 + PCDHGC5 chr5 141505393 + Exonic hg38 BRCA TCGA-BH-A209-01A 23 87 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 85889 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF791-FGFR1 ZNF791 chr19 12619320 + FGFR1 chr8 38418356 - Exonic hg38 BRCA TCGA-BH-A209-01A 4 63 Out-of-frame Inter-chr p13.13 Transcription factor p11.23 TK:FGFR Oncogene Seq+ 85890 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAF1-LRRC7 FAF1 chr1 50857929 - LRRC7 chr1 69792043 + Exonic hg38 BRCA TCGA-BH-A209-01A 2 18 In-Frame Intra-chr p32.3 p31.1 Seq+ 85891 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRBD1-PLEKHA6 SRBD1 chr2 45553623 - PLEKHA6 chr1 204274809 - Exonic hg38 BRCA TCGA-BH-A209-01A 1 15 CDS-5'UTR Inter-chr p21 q32.1 Seq+ 85892 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM109-CD5 TMEM109 chr11 60914268 + CD5 chr11 61115056 + Exonic hg38 BRCA TCGA-BH-A28Q-01A 7 29 5'UTR-5'UTR Intra-chr q12.2 q12.2 Seq+ 85893 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHS1-PDCD4 PLEKHS1 chr10 113769900 + PDCD4 chr10 110885253 + Exonic hg38 BRCA TCGA-BH-A42U-01A 2 1 In-Frame Intra-chr q25.3 q25.2 Tumor suppressor gene Seq+ 85894 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF473-NUP62 ZNF473 chr19 50031091 + NUP62 chr19 49909884 - Exonic hg38 BRCA TCGA-BH-A42V-01A 2 1 CDS-5'UTR Intra-chr q13.33 Transcription factor q13.33 Seq+ 85895 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRPK1-DDAH1 SRPK1 chr6 35869010 - DDAH1 chr1 85358847 - Exonic hg38 BRCA TCGA-BH-A5IZ-01A 23 56 In-Frame Inter-chr p21.31 CMGC:SRPK p22.3 Seq+ 85896 ChimerSeq TCGA FAWG TCGA_RNA-Seq DMTN-SFTPC DMTN chr8 22049224 + SFTPC chr8 22159475 + Exonic hg38 BRCA TCGA-BH-A5IZ-01A 12 38 5'UTR-5'UTR Intra-chr p21.3 p21.3 85897 ChimerSeq TCGA FAWG TCGA_RNA-Seq LARP4-RYR3 LARP4 chr12 50401028 + RYR3 chr15 33736235 + Exonic hg38 BRCA TCGA-BH-A5IZ-01A 6 20 Out-of-frame Inter-chr q13.12 q13.3 Seq+ 85898 ChimerSeq TCGA FAWG TCGA_RNA-Seq RYR3-LARP4 RYR3 chr15 33742444 + LARP4 chr12 50427762 + Exonic hg38 BRCA TCGA-BH-A5IZ-01A 2 18 In-Frame Inter-chr q13.3 q13.12 Seq+ 85899 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB10-NCOA1 RAB10 chr2 26034735 + NCOA1 chr2 24643966 + Exonic hg38 BRCA TCGA-BH-A5J0-01A 3 12 CDS-5'UTR Intra-chr p23.3 p23.3 Oncogene Transcription factor Seq+ 85900 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRE-HADHB BRE chr2 27988087 + HADHB chr2 26254247 + Exonic hg38 BRCA TCGA-BH-A5J0-01A 1 13 Out-of-frame Intra-chr p23.3 85901 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL33-HADHB MRPL33 chr2 27988087 + HADHB chr2 26254247 + Exonic hg38 BRCA TCGA-BH-A5J0-01A 1 13 3'UTR-5'UTR Intra-chr p23.2 p23.3 85902 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA1-CENPA NCOA1 chr2 24683128 + CENPA chr2 26792131 + Exonic hg38 BRCA TCGA-BH-A5J0-01A 2 2 In-Frame Intra-chr p23.3 Oncogene Transcription factor p23.3 Transcription factor Seq+ 85903 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPARC-COL3A1 SPARC chr5 151666373 - COL3A1 chr2 188988081 + Exonic hg38 BRCA TCGA-BH-A6R9-01A 1 9 Out-of-frame Inter-chr q33.1 Tumor suppressor gene q32.2 Seq+ 85904 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBXIP1-ACBD6 PBXIP1 chr1 154956069 - ACBD6 chr1 180314722 - Exonic hg38 BRCA TCGA-BH-A8FY-01A 10 13 5'UTR-CDS Intra-chr q21.3 q25.3 Seq+ 85905 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF11-ALDH9A1 ARHGEF11 chr1 157044299 - ALDH9A1 chr1 165695397 - Exonic hg38 BRCA TCGA-BH-A8FY-01A 5 13 Out-of-frame Intra-chr q23.1 q24.1 Seq+ 85906 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOS1AP-DCAF6 NOS1AP chr1 162154476 + DCAF6 chr1 168043025 + Exonic hg38 BRCA TCGA-BH-A8FY-01A 3 13 Out-of-frame Intra-chr q23.3 q24.2 Seq+ 85907 ChimerSeq TCGA FAWG TCGA_RNA-Seq DANT2-NXF3 DANT2 chrX 115968961 - NXF3 chrX 103084883 - Exonic hg38 BRCA TCGA-BH-A8FZ-01A 2 16 3'UTR-CDS Intra-chr q23 q22.1 85908 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIB2-SMIM13 MIB2 chr1 1616614 + SMIM13 chr6 11134403 + Exonic hg38 BRCA TCGA-C8-A12K-01A 9 73 Out-of-frame Inter-chr p36.33 p24.2 Seq+ 85909 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-C7orf57 SHANK2 chr11 71056481 - C7orf57 chr7 48060226 + Exonic hg38 BRCA TCGA-C8-A12K-01A 8 34 Out-of-frame Inter-chr q13.4 p12.3 85910 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID4B-CARD10 ARID4B chr1 235148404 - CARD10 chr22 37504769 - Exonic hg38 BRCA TCGA-C8-A12K-01A 11 19 3'UTR-CDS Inter-chr q42.3 q13.1 Seq+ 85911 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM34-CARD10 RBM34 chr1 235148404 - CARD10 chr22 37504769 - Exonic hg38 BRCA TCGA-C8-A12K-01A 11 19 Out-of-frame Inter-chr q42.3 q13.1 Seq+ 85912 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRBP1-RBBP8 RRBP1 chr20 17679999 - RBBP8 chr18 22911600 + Exonic hg38 BRCA TCGA-C8-A12K-01A 4 30 5'UTR-5'UTR Inter-chr p12.1 q11.2 Tumor suppressor gene Seq+ 85913 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCMTD1-ST18 PCMTD1 chr8 51860845 - ST18 chr8 52149977 - Exonic hg38 BRCA TCGA-C8-A12K-01A 5 17 Out-of-frame Intra-chr q11.23 q11.23 Transcription factor Seq+ 85914 ChimerSeq TCGA FAWG TCGA_RNA-Seq TGIF2-DLGAP4 TGIF2 chr20 36578966 + DLGAP4 chr20 36439754 + Exonic hg38 BRCA TCGA-C8-A12K-01A 2 15 Out-of-frame Intra-chr q11.23 Transcription factor q11.23 Seq+ 85915 ChimerSeq TCGA FAWG TCGA_RNA-Seq UCKL1-TXN UCKL1 chr20 63956260 - TXN chr9 110251462 - Exonic hg38 BRCA TCGA-C8-A12K-01A 4 7 Out-of-frame Inter-chr q13.33 q31.3 Seq+ 85916 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0922-MND1 KIAA0922 chr4 153604430 + MND1 chr4 153394262 + Exonic hg38 BRCA TCGA-C8-A12K-01A 3 10 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 85917 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUTC-C19orf57 CUTC chr10 99754634 + C19orf57 chr19 13892890 - Exonic hg38 BRCA TCGA-C8-A12K-01A 2 10 Out-of-frame Inter-chr q24.2 p13.12 Seq+ 85918 ChimerSeq TCGA FAWG TCGA_RNA-Seq NVL-WDR26 NVL chr1 224311800 - WDR26 chr1 224386502 - Exonic hg38 BRCA TCGA-C8-A12K-01A 2 9 CDS-3'UTR Intra-chr q42.11 q42.12 Seq+ 85919 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMIM13-MIB2 SMIM13 chr6 11094389 + MIB2 chr1 1616508 + Exonic hg38 BRCA TCGA-C8-A12K-01A 2 9 Out-of-frame Inter-chr p24.2 p36.33 Seq+ 85920 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOG-NUP98 RHOG chr11 3840894 - NUP98 chr11 3735324 - Exonic hg38 BRCA TCGA-C8-A12K-01A 2 8 5'UTR-CDS Intra-chr p15.4 p15.4 Oncogene Tumor suppressor gene Seq+ 85921 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD54-C22orf23 ANKRD54 chr22 37838500 - C22orf23 chr22 37953158 - Exonic hg38 BRCA TCGA-C8-A12K-01A 1 11 CDS-5'UTR Intra-chr q13.1 q13.1 85922 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM208B-NET1 FAM208B chr10 5761471 + NET1 chr10 5456588 + Exonic hg38 BRCA TCGA-C8-A12K-01A 2 6 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 85923 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALCAM-EIF2A ALCAM chr3 105367481 + EIF2A chr3 150552356 + Exonic hg38 BRCA TCGA-C8-A12L-01A 28 114 In-Frame Intra-chr q13.11 q25.1 Seq+ 85924 ChimerSeq TCGA FAWG TCGA_RNA-Seq MFSD12-RPL36 MFSD12 chr19 3547272 - RPL36 chr19 5690031 + Exonic hg38 BRCA TCGA-C8-A12L-01A 24 80 CDS-5'UTR Intra-chr p13.3 p13.3 85925 ChimerSeq TCGA FAWG TCGA_RNA-Seq RYBP-TADA3 RYBP chr3 72446496 - TADA3 chr3 9791493 - Exonic hg38 BRCA TCGA-C8-A12L-01A 19 74 5'UTR-5'UTR Intra-chr p25.3 Seq+ 85926 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2K7-SH3GL1 MAP2K7 chr19 7905855 + SH3GL1 chr19 4361796 - Exonic hg38 BRCA TCGA-C8-A12L-01A 8 57 In-Frame Intra-chr p13.2 STE:STE7 p13.3 Seq+ 85927 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL36-MFSD12 RPL36 chr19 5690327 + MFSD12 chr19 3544939 - Exonic hg38 BRCA TCGA-C8-A12L-01A 6 56 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 85928 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF15-MAN1A2 TAF15 chr17 35842459 + MAN1A2 chr1 117493147 + Exonic hg38 BRCA TCGA-C8-A12L-01A 12 31 3'UTR-CDS Inter-chr q12 p12 Seq+ 85929 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTRH2-DHX40P1 PTRH2 chr17 59707371 - DHX40P1 chr17 59976770 - Exonic hg38 BRCA TCGA-C8-A12L-01A 11 13 Out-of-frame Intra-chr q23.1 q23.1 85930 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1109-ADGRA3 KIAA1109 chr4 122339408 + ADGRA3 chr4 22392690 - Exonic hg38 BRCA TCGA-C8-A12L-01A 5 36 Out-of-frame Intra-chr q27 p15.2 85931 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC5L-SPATS1 CDC5L chr6 44419597 + SPATS1 chr6 44376358 + Exonic hg38 BRCA TCGA-C8-A12L-01A 6 24 3'UTR-CDS Intra-chr p21.1 Transcription factor p21.1 Seq+ 85932 ChimerSeq TCGA FAWG TCGA_RNA-Seq LONP1-MAP2K7 LONP1 chr19 5719704 - MAP2K7 chr19 7909755 + Exonic hg38 BRCA TCGA-C8-A12L-01A 7 20 Out-of-frame Intra-chr p13.3 p13.2 STE:STE7 Seq+ 85933 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESRRG-ADCY10 ESRRG chr1 216865061 - ADCY10 chr1 167824855 - Exonic hg38 BRCA TCGA-C8-A12L-01A 2 24 5'UTR-CDS Intra-chr q41 Transcription factor q24.2 Seq+ 85934 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTGFRN-NOTCH2 PTGFRN chr1 116949572 + NOTCH2 chr1 119969744 - Exonic hg38 BRCA TCGA-C8-A12L-01A 6 6 In-Frame Intra-chr p13.1 p12 Oncogene Tumor suppressor gene Seq+ 85935 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGSF3-TBX15 IGSF3 chr1 116599941 - TBX15 chr1 118914179 - Exonic hg38 BRCA TCGA-C8-A12L-01A 3 15 Out-of-frame Intra-chr p13.1 p12 Transcription factor Seq+ 85936 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPF18-CACNB2 PRPF18 chr10 13605744 + CACNB2 chr10 18150883 + Exonic hg38 BRCA TCGA-C8-A12L-01A 3 15 In-Frame Intra-chr p13 p12.33 Seq+ 85937 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKDC-DEFB103B PRKDC chr8 47849154 - DEFB103B chr8 7429129 - Exonic hg38 BRCA TCGA-C8-A12L-01A 1 22 CDS-3'UTR Intra-chr q11.21 Oncogene p23.1 85938 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGPS1-MVB12B RALGPS1 chr9 127069356 + MVB12B chr9 126503177 + Exonic hg38 BRCA TCGA-C8-A12L-01A 4 8 Out-of-frame Intra-chr q33.3 q33.3 Seq+ 85939 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC8E-MFSD12 LRRC8E chr19 7900935 + MFSD12 chr19 3546168 - Exonic hg38 BRCA TCGA-C8-A12L-01A 3 8 3'UTR-CDS Intra-chr p13.2 p13.3 Seq+ 85940 ChimerSeq TCGA FAWG TCGA_RNA-Seq C9orf3-PTPDC1 C9orf3 chr9 94760580 + PTPDC1 chr9 94064734 + Exonic hg38 BRCA TCGA-C8-A12L-01A 3 4 Out-of-frame Intra-chr q22.32 q22.32 Seq+ 85941 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD6-EFCAB11 CHD6 chr20 41533050 - EFCAB11 chr14 89797324 - Exonic hg38 BRCA TCGA-C8-A12L-01A 1 9 In-Frame Inter-chr q12 q32.11 Seq+ 85942 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXK1-SDK1 FOXK1 chr7 4682868 + SDK1 chr7 4208099 + Exonic hg38 BRCA TCGA-C8-A12L-01A 2 5 Out-of-frame Intra-chr p22.1 Transcription factor p22.2 Seq+ 85943 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3BP4-PGK1 SH3BP4 chr2 235035120 + PGK1 chrX 78123195 + Exonic hg38 BRCA TCGA-C8-A12L-01A 1 1 Out-of-frame Inter-chr q37.2 q21.1 85944 ChimerSeq TCGA FAWG TCGA_RNA-Seq CANT1-FBXL20 CANT1 chr17 79005372 - FBXL20 chr17 39303639 - Exonic hg38 BRCA TCGA-C8-A12M-01A 18 116 5'UTR-CDS Intra-chr q25.3 q12 Seq+ 85945 ChimerSeq TCGA FAWG TCGA_RNA-Seq CORO1C-C12orf42 CORO1C chr12 108678272 - C12orf42 chr12 103277210 - Exonic hg38 BRCA TCGA-C8-A12M-01A 10 93 CDS-3'UTR Intra-chr q24.11 q23.2 Seq+ 85946 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNRG-TUBD1 SYNRG chr17 37576341 - TUBD1 chr17 59866749 - Exonic hg38 BRCA TCGA-C8-A12M-01A 10 89 5'UTR-CDS Intra-chr q23.1 Seq+ 85947 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX5-EFCAB3 DDX5 chr17 64503803 - EFCAB3 chr17 62352933 + Exonic hg38 BRCA TCGA-C8-A12M-01A 7 78 CDS-5'UTR Intra-chr q23.3 q23.2 85948 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-TSPAN8 FRS2 chr12 69470530 + TSPAN8 chr12 71157787 - Exonic hg38 BRCA TCGA-C8-A12M-01A 3 93 5'UTR-5'UTR Intra-chr q15 q21.1 Seq+ 85949 ChimerSeq TCGA FAWG TCGA_RNA-Seq HECTD4-SRRM4 HECTD4 chr12 112167317 - SRRM4 chr12 119116937 + Exonic hg38 BRCA TCGA-C8-A12M-01A 9 7 Out-of-frame Intra-chr q24.13 q24.23 Seq+ 85950 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1E-VMP1 PPM1E chr17 58756461 + VMP1 chr17 59808796 + Exonic hg38 BRCA TCGA-C8-A12M-01A 7 15 Out-of-frame Intra-chr q22 q23.1 Seq+ 85951 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK12-AKAP1 CDK12 chr17 39471763 + AKAP1 chr17 57110025 + Exonic hg38 BRCA TCGA-C8-A12M-01A 4 16 Out-of-frame Intra-chr q12 Oncogene q22 Seq+ 85952 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG16L2-AKAP17A ATG16L2 chr11 72827293 + AKAP17A chrY 1593444 + Exonic hg38 BRCA TCGA-C8-A12M-01A 2 13 CDS-5'UTR Inter-chr q13.4 p22.33 85953 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNRG-MSI2 SYNRG chr17 37570908 - MSI2 chr17 57406898 + Exonic hg38 BRCA TCGA-C8-A12M-01A 4 4 Out-of-frame Intra-chr q22 85954 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13L-RNFT2 MED13L chr12 116096669 - RNFT2 chr12 116766814 + Exonic hg38 BRCA TCGA-C8-A12M-01A 2 11 Out-of-frame Intra-chr q24.21 q24.22 Seq+ 85955 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13L-FRG1GP MED13L chr12 116237468 - FRG1GP chr22 12624242 + Exonic hg38 BRCA TCGA-C8-A12M-01A 2 9 Out-of-frame Inter-chr q24.21 85956 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMYM2-MTMR6 ZMYM2 chr13 19960026 + MTMR6 chr13 25267941 - Exonic hg38 BRCA TCGA-C8-A12M-01A 1 9 5'UTR-CDS Intra-chr q12.11 q12.13 Seq+ 85957 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-PHF20L1 PVT1 chr8 127890998 + PHF20L1 chr8 132777792 + Exonic hg38 BRCA TCGA-C8-A12M-01A 1 6 5'UTR-5'UTR Intra-chr q24.21 q24.22 85958 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSI2-TRIM25 MSI2 chr17 57262192 + TRIM25 chr17 56908563 - Exonic hg38 BRCA TCGA-C8-A12M-01A 1 5 In-Frame Intra-chr q22 q22 85959 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPTOR-ANKFN1 RPTOR chr17 80545791 + ANKFN1 chr17 56326221 + Exonic hg38 BRCA TCGA-C8-A12M-01A 1 5 Out-of-frame Intra-chr q25.3 q22 Seq+ 85960 ChimerSeq TCGA FAWG TCGA_RNA-Seq NADSYN1-SHANK2 NADSYN1 chr11 71491903 + SHANK2 chr11 70896567 - Exonic hg38 BRCA TCGA-C8-A12O-01A 2 13 In-Frame Intra-chr q13.4 q13.4 Seq+ 85961 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANXA2-RNF114 ANXA2 chr15 60351193 - RNF114 chr20 49949248 + Exonic hg38 BRCA TCGA-C8-A12P-01A 630 2102 In-Frame Inter-chr q22.2 q13.13 Seq+ 85962 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERC1-TOMM34 ERC1 chr12 1408247 + TOMM34 chr20 44943579 - Exonic hg38 BRCA TCGA-C8-A12P-01A 29 78 Out-of-frame Inter-chr q13.12 Seq+ 85963 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPF2-IKZF3 WIPF2 chr17 40265146 + IKZF3 chr17 39792933 - Exonic hg38 BRCA TCGA-C8-A12P-01A 19 93 In-Frame Intra-chr q21.2 q21.1 Tumor suppressor gene Transcription factor Seq+ 85964 ChimerSeq TCGA FAWG TCGA_RNA-Seq NR2F2-MSI2 NR2F2 chr15 96326352 + MSI2 chr17 57529676 + Exonic hg38 BRCA TCGA-C8-A12P-01A 16 89 Out-of-frame Inter-chr q26.2 Transcription factor q22 Seq+ 85965 ChimerSeq TCGA FAWG TCGA_RNA-Seq BPTF-PIP4K2B BPTF chr17 67826337 + PIP4K2B chr17 38786920 - Exonic hg38 BRCA TCGA-C8-A12P-01A 11 96 CDS-5'UTR Intra-chr q24.2 Transcription factor q12 Seq+ 85966 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFPM2-1562D12.1 ZFPM2 chr8 105444381 + 1562D12.1 chr8 101461617 - Exonic hg38 BRCA TCGA-C8-A12P-01A 14 68 Out-of-frame Intra-chr q22.3 Transcription factor 85967 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD12-PRKCA PSMD12 chr17 67344606 - PRKCA chr17 66496201 + Exonic hg38 BRCA TCGA-C8-A12P-01A 14 35 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 85968 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYB561-GNA13 CYB561 chr17 63446245 - GNA13 chr17 65053728 - Exonic hg38 BRCA TCGA-C8-A12P-01A 16 24 5'UTR-5'UTR Intra-chr q23.3 q24.1 Seq+ 85969 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK1-ABHD3 ROCK1 chr18 21110818 - ABHD3 chr18 21703747 - Exonic hg38 BRCA TCGA-C8-A12P-01A 11 32 In-Frame Intra-chr q11.1 AGC:DMPK q11.2 Seq+ 85970 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK6-USO1 MAPK6 chr15 52019376 + USO1 chr4 75810432 + Exonic hg38 BRCA TCGA-C8-A12P-01A 11 27 5'UTR-CDS Inter-chr q21.2 q21.1 Seq+ 85971 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMED3-PCMTD2 TMED3 chr15 79413557 + PCMTD2 chr20 64267887 + Exonic hg38 BRCA TCGA-C8-A12P-01A 8 30 3'UTR-3'UTR Inter-chr q25.1 Seq+ 85972 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13-TEX2 MED13 chr17 61987007 - TEX2 chr17 64214242 - Exonic hg38 BRCA TCGA-C8-A12P-01A 5 31 CDS-5'UTR Intra-chr q23.2 q23.3 Seq+ 85973 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD3-CASC3 STARD3 chr17 39637231 + CASC3 chr17 40161753 + Exonic hg38 BRCA TCGA-C8-A12P-01A 7 8 5'UTR-CDS Intra-chr q12 q21.1 Seq+ 85974 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF345-HSF2BP ZNF345 chr19 36850968 + HSF2BP chr21 43592328 - Exonic hg38 BRCA TCGA-C8-A12P-01A 6 10 5'UTR-CDS Inter-chr q13.12 Transcription factor q22.3 Seq+ 85975 ChimerSeq TCGA FAWG TCGA_RNA-Seq BACH2-IGHM BACH2 chr6 90296480 - IGHM chr14 105856217 - Exonic hg38 BRCA TCGA-C8-A12P-01A 6 4 Out-of-frame Inter-chr q15 Transcription factor q32.33 Seq+ 85976 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF585A-GRAMD1A ZNF585A chr19 37165595 - GRAMD1A chr19 35013541 + Exonic hg38 BRCA TCGA-C8-A12P-01A 2 14 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.11 Seq+ 85977 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOMM34-ERC1 TOMM34 chr20 44951833 - ERC1 chr12 1444562 + Exonic hg38 BRCA TCGA-C8-A12P-01A 3 5 Out-of-frame Inter-chr q13.12 Seq+ 85978 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGF13-NEUROD2 FGF13 chrX 138857512 - NEUROD2 chr17 39608065 - Exonic hg38 BRCA TCGA-C8-A12P-01A 3 3 CDS-5'UTR Inter-chr q27.1 q12 Transcription factor 85979 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFP41-ANGPT1 ZFP41 chr8 143251340 + ANGPT1 chr8 107322128 - Exonic hg38 BRCA TCGA-C8-A12P-01A 2 6 3'UTR-CDS Intra-chr q24.3 Transcription factor q23.1 Seq+ 85980 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRMT2-DPF1 PRMT2 chr21 46636990 + DPF1 chr19 38222708 - Exonic hg38 BRCA TCGA-C8-A12P-01A 1 5 Out-of-frame Inter-chr q22.3 q13.2 Transcription factor 85981 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-BRIP1 BCAS3 chr17 60947352 + BRIP1 chr17 61801474 - Exonic hg38 BRCA TCGA-C8-A12P-01A 1 4 In-Frame Intra-chr q23.2 q23.2 Oncogene Seq+ 85982 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM131-FAM178B TMEM131 chr2 97792386 - FAM178B chr2 96947902 - Exonic hg38 BRCA TCGA-C8-A12P-01A 1 4 Out-of-frame Intra-chr q11.2 q11.2 85983 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFHD1-EIF4E2 EFHD1 chr2 232672443 + EIF4E2 chr2 232566829 + Exonic hg38 BRCA TCGA-C8-A12Q-01A 163 399 In-Frame Intra-chr q37.1 q37.1 Seq+ 85984 ChimerSeq TCGA FAWG TCGA_RNA-Seq GFM1-MLF1 GFM1 chr3 158666386 + MLF1 chr3 158592434 + Exonic hg38 BRCA TCGA-C8-A12Q-01A 124 177 In-Frame Intra-chr q25.32 q25.32 Seq+ 85985 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF717-TMEM254 ZNF717 chr3 75783306 - TMEM254 chr10 80081841 + Exonic hg38 BRCA TCGA-C8-A12Q-01A 22 64 In-Frame Inter-chr p12.3 Transcription factor q22.3 Seq+ 85986 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS15L1-CLNS1A EPS15L1 chr19 16441892 - CLNS1A chr11 77619695 - Exonic hg38 BRCA TCGA-C8-A12Q-01A 17 55 Out-of-frame Inter-chr p13.11 q14.1 Seq+ 85987 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPRD2-SHC1 RPRD2 chr1 150364919 + SHC1 chr1 154966517 - Exonic hg38 BRCA TCGA-C8-A12Q-01A 10 61 Out-of-frame Intra-chr q21.2 q21.3 Seq+ 85988 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD9A-KDM2A RAD9A chr11 67393790 + KDM2A chr11 67257484 + Exonic hg38 BRCA TCGA-C8-A12Q-01A 10 45 CDS-5'UTR Intra-chr q13.2 q13.2 Transcription factor Seq+ 85989 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTR3B-PTPRN2 ACTR3B chr7 152825122 + PTPRN2 chr7 157595315 - Exonic hg38 BRCA TCGA-C8-A12Q-01A 16 18 In-Frame Intra-chr q36.1 q36.3 Seq+ 85990 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCR-MRVI1 BCR chr22 23182239 + MRVI1 chr11 10652182 - Exonic hg38 BRCA TCGA-C8-A12Q-01A 10 42 In-Frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene p15.4 Tumor suppressor gene Seq+ 85991 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYT12-C11orf80 SYT12 chr11 67034838 + C11orf80 chr11 66838370 + Exonic hg38 BRCA TCGA-C8-A12Q-01A 8 45 In-Frame Intra-chr q13.2 q13.2 Seq+ 85992 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB38-CA10 RAB38 chr11 88175183 - CA10 chr17 52072393 - Exonic hg38 BRCA TCGA-C8-A12Q-01A 7 38 In-Frame Inter-chr q14.2 q22 Seq+ 85993 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP39-DNAH6 USP39 chr2 85630946 + DNAH6 chr2 84718204 + Exonic hg38 BRCA TCGA-C8-A12Q-01A 10 5 CDS-3'UTR Intra-chr p11.2 p11.2 Seq+ 85994 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF169-CBX1 RNF169 chr11 74817714 + CBX1 chr17 48077041 - Exonic hg38 BRCA TCGA-C8-A12Q-01A 5 23 CDS-5'UTR Inter-chr q13.4 q21.32 Seq+ 85995 ChimerSeq TCGA FAWG TCGA_RNA-Seq PNCK-HCFC1 PNCK chrX 153687431 - HCFC1 chrX 153964726 - Exonic hg38 BRCA TCGA-C8-A12Q-01A 2 27 5'UTR-CDS Intra-chr q28 q28 Seq+ 85996 ChimerSeq TCGA FAWG TCGA_RNA-Seq CKS1B-SHC1 CKS1B chr1 154974804 + SHC1 chr1 154966517 - Exonic hg38 BRCA TCGA-C8-A12Q-01A 4 13 In-Frame Intra-chr q21.3 Oncogene q21.3 Seq+ 85997 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHC1-RPRD2 SHC1 chr1 154974248 - RPRD2 chr1 150417596 + Exonic hg38 BRCA TCGA-C8-A12Q-01A 3 16 5'UTR-CDS Intra-chr q21.3 q21.2 Seq+ 85998 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD9A-IKZF3 RAD9A chr11 67321333 + IKZF3 chr17 39832151 - Exonic hg38 BRCA TCGA-C8-A12Q-01A 5 6 5'UTR-5'UTR Inter-chr q13.2 q21.1 Tumor suppressor gene Transcription factor 85999 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCM9-FAM184A MCM9 chr6 118894027 - FAM184A chr6 119016944 - Exonic hg38 BRCA TCGA-C8-A12Q-01A 4 8 3'UTR-CDS Intra-chr q22.31 Tumor suppressor gene q22.31 Seq+ 86000 ChimerSeq TCGA FAWG TCGA_RNA-Seq APPL1-SPATA12 APPL1 chr3 57253738 + SPATA12 chr3 57073366 + Exonic hg38 BRCA TCGA-C8-A12Q-01A 3 11 CDS-5'UTR Intra-chr p14.3 p14.3 Seq+ 86001 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACOT7-KLHL21 ACOT7 chr1 6318492 - KLHL21 chr1 6595557 - Exonic hg38 BRCA TCGA-C8-A12Q-01A 4 4 Out-of-frame Intra-chr p36.31 p36.31 Seq+ 86002 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT18-PPP1R1B GALNT18 chr11 11621359 - PPP1R1B chr17 39629170 + Exonic hg38 BRCA TCGA-C8-A12Q-01A 3 7 Out-of-frame Inter-chr p15.4 q12 Tumor suppressor gene Seq+ 86003 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP4Z2P-TRABD2B CYP4Z2P chr1 46898843 - TRABD2B chr1 47801619 - Exonic hg38 BRCA TCGA-C8-A12Q-01A 3 6 3'UTR-CDS Intra-chr p33 p33 Seq+ 86004 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFA10-COPS9 NDUFA10 chr2 240005210 - COPS9 chr2 240134005 - Exonic hg38 BRCA TCGA-C8-A12Q-01A 2 9 Out-of-frame Intra-chr q37.3 86005 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAKD-PLCD3 DCAKD chr17 45060888 - PLCD3 chr17 45121372 - Exonic hg38 BRCA TCGA-C8-A12Q-01A 2 5 5'UTR-CDS Intra-chr q21.31 q21.31 Seq+ 86006 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRDC-USP24 NRDC chr1 51878275 - USP24 chr1 55107430 - Exonic hg38 BRCA TCGA-C8-A12Q-01A 2 5 Out-of-frame Intra-chr p32.3 p32.3 86007 ChimerSeq TCGA FAWG TCGA_RNA-Seq CORO1B-ERBB2 CORO1B chr11 67440118 - ERBB2 chr17 39711928 + Exonic hg38 BRCA TCGA-C8-A12Q-01A 1 8 Out-of-frame Inter-chr q13.2 q12 Oncogene Seq+ 86008 ChimerSeq TCGA FAWG TCGA_RNA-Seq TERF2-COG4 TERF2 chr16 69384580 - COG4 chr16 70490392 - Exonic hg38 BRCA TCGA-C8-A12Q-01A 2 4 In-Frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 86009 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEF2K-VWA3A EEF2K chr16 22273750 + VWA3A chr16 22144247 + Exonic hg38 BRCA TCGA-C8-A12Q-01A 2 2 5'UTR-5'UTR Intra-chr p12.2 Seq+ 86010 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNAS-RTFDC1 GNAS chr20 58895684 + RTFDC1 chr20 56484111 + Exonic hg38 BRCA TCGA-C8-A12Q-01A 1 4 Out-of-frame Intra-chr q13.32 Oncogene q13.31 86011 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM1-NKAIN1 PUM1 chr1 30950133 - NKAIN1 chr1 31188187 - Exonic hg38 BRCA TCGA-C8-A12Q-01A 1 3 In-Frame Intra-chr p35.2 p35.2 Seq+ 86012 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASZ1-SRM CASZ1 chr1 10693874 - SRM chr1 11059345 - Exonic hg38 BRCA TCGA-C8-A12Q-01A 1 2 Out-of-frame Intra-chr p36.22 Transcription factor p36.22 TK:Src 86013 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF341-DYNLRB1 ZNF341 chr20 33757322 + DYNLRB1 chr20 34540581 + Exonic hg38 BRCA TCGA-C8-A12T-01A 22 133 In-Frame Intra-chr q11.22 Transcription factor q11.22 Seq+ 86014 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBL1-NDRG3 RBL1 chr20 37022650 - NDRG3 chr20 36707007 - Exonic hg38 BRCA TCGA-C8-A12T-01A 19 44 In-Frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 86015 ChimerSeq TCGA FAWG TCGA_RNA-Seq GABPB1-GALK2 GABPB1 chr15 50354985 - GALK2 chr15 49319604 + Exonic hg38 BRCA TCGA-C8-A12T-01A 8 46 5'UTR-5'UTR Intra-chr q21.2 q21.1 Seq+ 86016 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPEPPS-GNGT2 NPEPPS chr17 47569494 + GNGT2 chr17 49203032 - Exonic hg38 BRCA TCGA-C8-A12T-01A 1000 1000 CDS-3'UTR Intra-chr q21.32 q21.32 86017 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC2-SH3RF3 EXOC2 chr6 693019 - SH3RF3 chr2 109347674 + Exonic hg38 BRCA TCGA-C8-A12U-01A 14 19 5'UTR-CDS Inter-chr p25.3 q13 Seq+ 86018 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSD17B7-NPHP1 HSD17B7 chr1 162792862 + NPHP1 chr2 110169998 - Exonic hg38 BRCA TCGA-C8-A12U-01A 3 44 In-Frame Inter-chr q23.3 q13 Seq+ 86019 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM136-POU2F3 TMEM136 chr11 120327640 + POU2F3 chr11 120269210 + Exonic hg38 BRCA TCGA-C8-A12U-01A 7 18 Out-of-frame Intra-chr q23.3 q23.3 Tumor suppressor gene Transcription factor Seq+ 86020 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRHL2-TRAPPC9 GRHL2 chr8 101599151 + TRAPPC9 chr8 139910300 - Exonic hg38 BRCA TCGA-C8-A12U-01A 5 17 Out-of-frame Intra-chr q22.3 Transcription factor q24.3 Seq+ 86021 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANBP2-BMP5 RANBP2 chr2 108755259 + BMP5 chr6 55794427 - Exonic hg38 BRCA TCGA-C8-A12U-01A 4 17 Out-of-frame Inter-chr q13 p12.1 Seq+ 86022 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPHP1-DDR2 NPHP1 chr2 110201421 - DDR2 chr1 162783797 + Exonic hg38 BRCA TCGA-C8-A12U-01A 3 8 CDS-3'UTR Inter-chr q13 q23.3 TK:DDR Oncogene Tumor suppressor gene 86023 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM19A2-KCNMB4 FAM19A2 chr12 62023652 - KCNMB4 chr12 70430485 + Exonic hg38 BRCA TCGA-C8-A12U-01A 3 4 Out-of-frame Intra-chr q14.1 q15 Seq+ 86024 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANBP9-TPMT RANBP9 chr6 13710935 - TPMT chr6 18149171 - Exonic hg38 BRCA TCGA-C8-A12U-01A 1 8 CDS-5'UTR Intra-chr p23 Tumor suppressor gene p22.3 Seq+ 86025 ChimerSeq TCGA FAWG TCGA_RNA-Seq GBA2-ATP6V1C1 GBA2 chr9 35748346 - ATP6V1C1 chr8 103048870 + Exonic hg38 BRCA TCGA-C8-A12U-01A 1 6 In-Frame Inter-chr p13.3 q22.3 Seq+ 86026 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMD12-ATAD2 SAMD12 chr8 118580715 - ATAD2 chr8 123380677 - Exonic hg38 BRCA TCGA-C8-A12U-01A 1 2 In-Frame Intra-chr q24.12 q24.13 86027 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT9-MRPL38 SEPT9 chr17 77307200 + MRPL38 chr17 75899574 - Exonic hg38 BRCA TCGA-C8-A12V-01A 16 251 Out-of-frame Intra-chr q25.1 Seq+ 86028 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1A-THBS3 ARID1A chr1 26732792 + THBS3 chr1 155203137 - Exonic hg38 BRCA TCGA-C8-A12V-01A 24 66 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene q22 Seq+ 86029 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDHX-EIF3M PDHX chr11 34957583 + EIF3M chr11 32600689 + Exonic hg38 BRCA TCGA-C8-A12V-01A 7 18 Out-of-frame Intra-chr p13 p13 Seq+ 86030 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNS2-ACVR1B TNS2 chr12 53051963 + ACVR1B chr12 51985192 + Exonic hg38 BRCA TCGA-C8-A12V-01A 4 7 In-Frame Intra-chr q13.13 q13.13 Oncogene 86031 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB27A-NEDD4 RAB27A chr15 55270165 - NEDD4 chr15 55874008 - Exonic hg38 BRCA TCGA-C8-A12V-01A 1 9 5'UTR-5'UTR Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 86032 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSBN1L-DTNBP1 RSBN1L chr7 77697055 + DTNBP1 chr6 15652140 - Exonic hg38 BRCA TCGA-C8-A12V-01A 1 8 Out-of-frame Inter-chr q11.23 p22.3 86033 ChimerSeq TCGA FAWG TCGA_RNA-Seq PI4KA-FAM19A5 PI4KA chr22 20793193 - FAM19A5 chr22 48707717 + Exonic hg38 BRCA TCGA-C8-A12W-01A 5 11 Out-of-frame Intra-chr q11.21 q13.32 Seq+ 86034 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC33-ADAM19 TTC33 chr5 40746798 - ADAM19 chr5 157537991 - Exonic hg38 BRCA TCGA-C8-A12W-01A 2 7 In-Frame Intra-chr p13.1 q33.3 Seq+ 86035 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD17-GC ANKRD17 chr4 73135117 - GC chr4 71765643 - Exonic hg38 BRCA TCGA-C8-A12W-01A 2 5 In-Frame Intra-chr q13.3 q13.3 Seq+ 86036 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM23-SLC7A8 RBM23 chr14 22918999 - SLC7A8 chr14 23166540 - Exonic hg38 BRCA TCGA-C8-A12W-01A 2 5 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 86037 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC10-SOGA1 TRAPPC10 chr21 44094233 + SOGA1 chr20 36839441 - Exonic hg38 BRCA TCGA-C8-A12W-01A 2 5 In-Frame Inter-chr q22.3 q11.23 Seq+ 86038 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPC4AP-PLCG1 TRPC4AP chr20 35035123 - PLCG1 chr20 41196677 + Exonic hg38 BRCA TCGA-C8-A12W-01A 1 8 CDS-3'UTR Intra-chr q11.22 q12 Oncogene 86039 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRR1-KCNH5 LRR1 chr14 49599203 + KCNH5 chr14 63006472 - Exonic hg38 BRCA TCGA-C8-A12W-01A 1 5 Out-of-frame Intra-chr q21.3 q23.2 Seq+ 86040 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF185-SFI1 RNF185 chr22 31160303 + SFI1 chr22 31546861 + Exonic hg38 BRCA TCGA-C8-A12W-01A 1 5 5'UTR-CDS Intra-chr q12.2 q12.2 86041 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBNL1-NAALADL2 MBNL1 chr3 152300367 + NAALADL2 chr3 174737641 + Exonic hg38 BRCA TCGA-C8-A12Y-01A 3 3 CDS-5'UTR Intra-chr q25.1 q26.31 Seq+ 86042 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF721-FASN ZNF721 chr4 473981 - FASN chr17 82081843 - Exonic hg38 BRCA TCGA-C8-A12Y-01A 2 1 5'UTR-CDS Inter-chr p16.3 Transcription factor q25.3 86043 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-SLC30A8 PVT1 chr8 127794734 + SLC30A8 chr8 117146819 + Exonic hg38 BRCA TCGA-C8-A12Z-01A 15 147 5'UTR-5'UTR Intra-chr q24.21 q24.11 Seq+ 86044 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF7-SPATS2 ATF7 chr12 53552541 - SPATS2 chr12 49496833 + Exonic hg38 BRCA TCGA-C8-A12Z-01A 8 51 In-Frame Intra-chr q13.13 Transcription factor q13.12 Seq+ 86045 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A6-TBX15 SLC39A6 chr18 36129114 - TBX15 chr1 118899125 - Exonic hg38 BRCA TCGA-C8-A12Z-01A 7 20 5'UTR-CDS Inter-chr q12.2 p12 Transcription factor Seq+ 86046 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-FBXO47 FBXL20 chr17 39282729 - FBXO47 chr17 38963051 - Exonic hg38 BRCA TCGA-C8-A12Z-01A 7 19 CDS-5'UTR Intra-chr q12 q12 86047 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-PPP1R1B ERBB2 chr17 39715939 + PPP1R1B chr17 39633883 + Exonic hg38 BRCA TCGA-C8-A12Z-01A 1 22 In-Frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 86048 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPQ-OC90 CPQ chr8 96645402 + OC90 chr8 132055073 - Exonic hg38 BRCA TCGA-C8-A12Z-01A 1 9 5'UTR-5'UTR Intra-chr q22.1 q24.22 86049 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAF1-SSUH2 RAF1 chr3 12663813 - SSUH2 chr3 8742602 - Exonic hg38 BRCA TCGA-C8-A12Z-01A 1 6 5'UTR-5'UTR Intra-chr p25.2 TKL:RAF Oncogene p25.3 86050 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAGLU-FBXL20 NAGLU chr17 42538755 + FBXL20 chr17 39275100 - Exonic hg38 BRCA TCGA-C8-A12Z-01A 1 1 Out-of-frame Intra-chr q21.2 q12 86051 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYRK1A-ZBTB46 DYRK1A chr21 37472880 + ZBTB46 chr20 63790790 - Exonic hg38 BRCA TCGA-C8-A130-01A 16 56 CDS-5'UTR Inter-chr q22.13 CMGC:DYRK q13.33 Transcription factor Seq+ 86052 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSCR3-MACROD2 DSCR3 chr21 37267238 - MACROD2 chr20 16041201 + Exonic hg38 BRCA TCGA-C8-A130-01A 2 15 Out-of-frame Inter-chr q22.13 p12.1 Seq+ 86053 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMCO3-KATNAL2 TMCO3 chr13 113539507 + KATNAL2 chr18 47046457 + Exonic hg38 BRCA TCGA-C8-A130-01A 2 10 Out-of-frame Inter-chr q34 q21.1 Seq+ 86054 ChimerSeq TCGA FAWG TCGA_RNA-Seq C5-RUVBL1 C5 chr9 120953730 - RUVBL1 chr3 128082574 - Exonic hg38 BRCA TCGA-C8-A130-01A 1 5 Out-of-frame Inter-chr q33.2 q21.3 86055 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPF2-IL2RB WIPF2 chr17 40219492 + IL2RB chr22 37144205 - Exonic hg38 BRCA TCGA-C8-A132-01A 261 749 5'UTR-5'UTR Inter-chr q21.2 q12.3 Seq+ 86056 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD2-ECE2 PSMD2 chr3 184304391 + ECE2 chr3 184287837 + Exonic hg38 BRCA TCGA-C8-A132-01A 18 97 In-Frame Intra-chr q27.1 q27.1 Seq+ 86057 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCTA-ARIH2 TCTA chr3 49413110 + ARIH2 chr3 48981660 + Exonic hg38 BRCA TCGA-C8-A132-01A 23 56 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 86058 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLLT3-CISD3 MLLT3 chr9 20620654 - CISD3 chr17 38730760 + Exonic hg38 BRCA TCGA-C8-A132-01A 22 49 CDS-3'UTR Inter-chr p21.3 Seq+ 86059 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-ABI3 ERBB2 chr17 39725853 + ABI3 chr17 49216531 + Exonic hg38 BRCA TCGA-C8-A132-01A 15 74 Out-of-frame Intra-chr q12 Oncogene q21.32 Seq+ 86060 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN2-GIT2 ATXN2 chr12 111552280 - GIT2 chr12 109967503 - Exonic hg38 BRCA TCGA-C8-A132-01A 13 21 In-Frame Intra-chr q24.12 q24.11 Seq+ 86061 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS6-EME1 TMPRSS6 chr22 37089578 - EME1 chr17 50378595 + Exonic hg38 BRCA TCGA-C8-A132-01A 5 17 Out-of-frame Inter-chr q12.3 Tumor suppressor gene q21.33 Seq+ 86062 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM177A1-IQSEC3 FAM177A1 chr14 35077216 + IQSEC3 chr12 161926 + Exonic hg38 BRCA TCGA-C8-A132-01A 1 30 In-Frame Inter-chr q13.2 Seq+ 86063 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABI3-STARD3 ABI3 chr17 49219953 + STARD3 chr17 39653481 + Exonic hg38 BRCA TCGA-C8-A132-01A 1 19 CDS-5'UTR Intra-chr q21.32 q12 86064 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED26-CERS1 MED26 chr19 16627872 - CERS1 chr19 18884267 - Exonic hg38 BRCA TCGA-C8-A132-01A 3 11 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 86065 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED26-GDF1 MED26 chr19 16627872 - GDF1 chr19 18884267 - Exonic hg38 BRCA TCGA-C8-A132-01A 3 11 CDS-5'UTR Intra-chr p13.11 p13.11 Seq+ 86066 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIPOL1-CASC3 MIPOL1 chr14 37227838 + CASC3 chr17 40161753 + Exonic hg38 BRCA TCGA-C8-A132-01A 1 17 5'UTR-CDS Inter-chr q13.3 q21.1 86067 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIP4K2B-MLLT6 PIP4K2B chr17 38777687 - MLLT6 chr17 38719517 + Exonic hg38 BRCA TCGA-C8-A132-01A 3 9 5'UTR-3'UTR Intra-chr q12 q12 Seq+ 86068 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX31-AK8 DDX31 chr9 132625664 - AK8 chr9 132727534 - Exonic hg38 BRCA TCGA-C8-A132-01A 1 9 Out-of-frame Intra-chr q34.13 q34.13 Seq+ 86069 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED1-MRPL45 MED1 chr17 39443550 - MRPL45 chr17 38298449 + Exonic hg38 BRCA TCGA-C8-A132-01A 2 5 CDS-3'UTR Intra-chr q12 Tumor suppressor gene q12 Seq+ 86070 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMB3-FAM117A PSMB3 chr17 38755990 + FAM117A chr17 49732720 - Exonic hg38 BRCA TCGA-C8-A132-01A 1 9 3'UTR-CDS Intra-chr q21.33 86071 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAPGEFL1-IKZF3 RAPGEFL1 chr17 40190762 + IKZF3 chr17 39792933 - Exonic hg38 BRCA TCGA-C8-A132-01A 2 4 Out-of-frame Intra-chr q21.1 q21.1 Tumor suppressor gene Transcription factor Seq+ 86072 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED1-NGFR MED1 chr17 39447798 - NGFR chr17 49502063 + Exonic hg38 BRCA TCGA-C8-A132-01A 1 2 In-Frame Intra-chr q12 Tumor suppressor gene q21.33 Tumor suppressor gene 86073 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPF2-GRB7 WIPF2 chr17 40219492 + GRB7 chr17 39744886 + Exonic hg38 BRCA TCGA-C8-A132-01A 1 1 5'UTR-CDS Intra-chr q21.2 q12 86074 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS28-HIST1H2AC MRPS28 chr8 80002999 - HIST1H2AC chr6 26138054 + Exonic hg38 BRCA TCGA-C8-A134-01A 22 99 CDS-3'UTR Inter-chr q21.13 p22.2 Seq+ 86075 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBL1-CPNE1 RBL1 chr20 37095773 - CPNE1 chr20 35632923 - Exonic hg38 BRCA TCGA-C8-A134-01A 17 65 In-Frame Intra-chr q11.23 Tumor suppressor gene q11.22 Seq+ 86076 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRE-PRKCE BRE chr2 28045799 + PRKCE chr2 46086208 + Exonic hg38 BRCA TCGA-C8-A134-01A 11 29 Out-of-frame Intra-chr p21 Tumor suppressor gene Seq+ 86077 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOBTB1-ATP6V1C2 RHOBTB1 chr10 60941804 - ATP6V1C2 chr2 10768719 + Exonic hg38 BRCA TCGA-C8-A134-01A 6 20 5'UTR-CDS Inter-chr q21.2 p25.1 Seq+ 86078 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRNAU1AP-RCC1 TRNAU1AP chr1 28567413 + RCC1 chr1 28535050 + Exonic hg38 BRCA TCGA-C8-A134-01A 4 21 Out-of-frame Intra-chr p35.3 p35.3 Seq+ 86079 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACSS2-GSS ACSS2 chr20 34914437 + GSS chr20 34928951 - Exonic hg38 BRCA TCGA-C8-A134-01A 3 19 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 86080 ChimerSeq TCGA FAWG TCGA_RNA-Seq IQCB1-RUVBL1 IQCB1 chr3 121826051 - RUVBL1 chr3 128065220 - Exonic hg38 BRCA TCGA-C8-A134-01A 3 13 CDS-5'UTR Intra-chr q13.33 q21.3 86081 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMB1-PARP14 LAMB1 chr7 107994887 - PARP14 chr3 122727812 + Exonic hg38 BRCA TCGA-C8-A134-01A 1 1 In-Frame Inter-chr q31.1 q21.1 Seq+ 86082 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3R3-LRRC41 PIK3R3 chr1 46080642 - LRRC41 chr1 46267677 - Exonic hg38 BRCA TCGA-C8-A135-01A 41 121 3'UTR-3'UTR Intra-chr p34.1 p33 Seq+ 86083 ChimerSeq TCGA FAWG TCGA_RNA-Seq CANT1-PSMD3 CANT1 chr17 79009664 - PSMD3 chr17 39984294 + Exonic hg38 BRCA TCGA-C8-A135-01A 28 89 5'UTR-CDS Intra-chr q25.3 q21.1 Seq+ 86084 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD3-IKZF3 STARD3 chr17 39637231 + IKZF3 chr17 39757965 - Exonic hg38 BRCA TCGA-C8-A135-01A 20 64 5'UTR-3'UTR Intra-chr q12 q21.1 Tumor suppressor gene Transcription factor Seq+ 86085 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMX2-C11orf80 TMX2 chr11 57712807 + C11orf80 chr11 66796281 + Exonic hg38 BRCA TCGA-C8-A135-01A 9 42 In-Frame Intra-chr q12.1 q13.2 Seq+ 86086 ChimerSeq TCGA FAWG TCGA_RNA-Seq PACS1-ZDHHC24 PACS1 chr11 66070842 + ZDHHC24 chr11 66543981 - Exonic hg38 BRCA TCGA-C8-A135-01A 6 50 In-Frame Intra-chr q13.1 q13.2 Seq+ 86087 ChimerSeq TCGA FAWG TCGA_RNA-Seq VASP-EXOC3L2 VASP chr19 45507776 + EXOC3L2 chr19 45218319 - Exonic hg38 BRCA TCGA-C8-A135-01A 7 24 Out-of-frame Intra-chr q13.32 q13.32 Seq+ 86088 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNKSR1-MAN1C1 CNKSR1 chr1 26184612 + MAN1C1 chr1 25771657 + Exonic hg38 BRCA TCGA-C8-A135-01A 6 16 In-Frame Intra-chr p36.11 p36.11 Seq+ 86089 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK24-RUNX1 STK24 chr13 98519243 - RUNX1 chr21 35580929 - Exonic hg38 BRCA TCGA-C8-A135-01A 4 22 CDS-5'UTR Inter-chr q32.2 q22.12 Oncogene Tumor suppressor gene Transcription factor 86090 ChimerSeq TCGA FAWG TCGA_RNA-Seq FXR1-RIMS2 FXR1 chr3 180933386 + RIMS2 chr8 104068512 + Exonic hg38 BRCA TCGA-C8-A135-01A 5 12 Out-of-frame Inter-chr q26.33 q22.3 Seq+ 86091 ChimerSeq TCGA FAWG TCGA_RNA-Seq TET3-C2orf78 TET3 chr2 74048411 + C2orf78 chr2 73813477 + Exonic hg38 BRCA TCGA-C8-A135-01A 5 12 In-Frame Intra-chr p13.1 Transcription factor p13.1 Seq+ 86092 ChimerSeq TCGA FAWG TCGA_RNA-Seq C19orf47-BLVRB C19orf47 chr19 40322028 - BLVRB chr19 40458545 - Exonic hg38 BRCA TCGA-C8-A135-01A 4 15 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 86093 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENDOV-SLC26A11 ENDOV chr17 80415610 + SLC26A11 chr17 80236928 + Exonic hg38 BRCA TCGA-C8-A135-01A 1 20 5'UTR-CDS Intra-chr q25.3 q25.3 Seq+ 86094 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS5-SYT12 INTS5 chr11 62653170 - SYT12 chr11 67021869 + Exonic hg38 BRCA TCGA-C8-A135-01A 4 7 CDS-5'UTR Intra-chr q12.3 q13.2 Seq+ 86095 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNB1-PPP4C CACNB1 chr17 39183713 - PPP4C chr16 30083394 + Exonic hg38 BRCA TCGA-C8-A135-01A 2 11 In-Frame Inter-chr q12 p11.2 Seq+ 86096 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP214-TOM1L2 NUP214 chr9 131197416 + TOM1L2 chr17 17907531 - Exonic hg38 BRCA TCGA-C8-A135-01A 3 7 In-Frame Inter-chr q34.13 Oncogene p11.2 Tumor suppressor gene Seq+ 86097 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF3-NUS1 PHF3 chr6 63646795 + NUS1 chr6 117693042 + Exonic hg38 BRCA TCGA-C8-A135-01A 2 9 In-Frame Intra-chr q12 q22.1 Seq+ 86098 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCY9-PAM16 ADCY9 chr16 4113750 - PAM16 chr16 4331774 - Exonic hg38 BRCA TCGA-C8-A135-01A 2 7 CDS-5'UTR Intra-chr p13.3 p13.3 86099 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXD3-ZMYND19 EXD3 chr9 137423114 - ZMYND19 chr9 137588718 - Exonic hg38 BRCA TCGA-C8-A135-01A 3 2 5'UTR-CDS Intra-chr q34.3 q34.3 Seq+ 86100 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTRH2-STXBP4 PTRH2 chr17 59707371 - STXBP4 chr17 55141310 + Exonic hg38 BRCA TCGA-C8-A135-01A 2 4 5'UTR-CDS Intra-chr q23.1 q22 Seq+ 86101 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF3-GATS ZNF3 chr7 100081635 - GATS chr7 100233674 - Exonic hg38 BRCA TCGA-C8-A135-01A 1 8 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 86102 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-CANT1 FBXL20 chr17 39343180 - CANT1 chr17 78997963 - Exonic hg38 BRCA TCGA-C8-A135-01A 1 5 CDS-5'UTR Intra-chr q12 q25.3 86103 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSI2-PPM1E MSI2 chr17 57262192 + PPM1E chr17 58955649 + Exonic hg38 BRCA TCGA-C8-A135-01A 1 5 Out-of-frame Intra-chr q22 q22 86104 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP32-TANC2 USP32 chr17 60222409 - TANC2 chr17 63151270 + Exonic hg38 BRCA TCGA-C8-A135-01A 1 4 Out-of-frame Intra-chr q23.2 q23.2 86105 ChimerSeq TCGA FAWG TCGA_RNA-Seq LUC7L3-MPRIP LUC7L3 chr17 50719831 + MPRIP chr17 17075710 + Exonic hg38 BRCA TCGA-C8-A135-01A 1 3 In-Frame Intra-chr q21.33 p11.2 86106 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEMT-PRKCA PEMT chr17 17576920 - PRKCA chr17 66641355 + Exonic hg38 BRCA TCGA-C8-A135-01A 1 3 In-Frame Intra-chr p11.2 q24.2 86107 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC28-ASCC2 TTC28 chr22 28296198 - ASCC2 chr22 29790548 - Exonic hg38 BRCA TCGA-C8-A135-01A 1 2 In-Frame Intra-chr q12.1 q12.2 86108 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTG1-ZNF511 MTG1 chr10 133402773 + ZNF511 chr10 133312788 + Exonic hg38 BRCA TCGA-C8-A137-01A 30 101 In-Frame Intra-chr q26.3 q26.3 Transcription factor Seq+ 86109 ChimerSeq TCGA FAWG TCGA_RNA-Seq PREP-AIM1 PREP chr6 105281746 - AIM1 chr6 106555768 + Exonic hg38 BRCA TCGA-C8-A137-01A 23 52 Out-of-frame Intra-chr q21 Seq+ 86110 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF592-ZSCAN2 ZNF592 chr15 84782814 + ZSCAN2 chr15 84620602 + Exonic hg38 BRCA TCGA-C8-A137-01A 8 15 Out-of-frame Intra-chr q25.3 Transcription factor q25.2 Transcription factor Seq+ 86111 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBTD2-SH3PXD2B UBTD2 chr5 172234122 - SH3PXD2B chr5 172382127 - Exonic hg38 BRCA TCGA-C8-A137-01A 4 10 Out-of-frame Intra-chr q35.1 q35.1 Seq+ 86112 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF6-MPZL1 DCAF6 chr1 167951861 + MPZL1 chr1 167765583 + Exonic hg38 BRCA TCGA-C8-A137-01A 1 4 Out-of-frame Intra-chr q24.2 q24.2 KB Seq+ 86113 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPT1A-MYEOV CPT1A chr11 68841775 - MYEOV chr11 69341510 + Exonic hg38 BRCA TCGA-C8-A138-01A 10 22 5'UTR-3'UTR Intra-chr q13.3 q13.3 86114 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAM1-CLVS1 TRAM1 chr8 70600019 - CLVS1 chr8 61376605 + Exonic hg38 BRCA TCGA-C8-A138-01A 6 15 Out-of-frame Intra-chr q13.3 q12.2 Seq+ 86115 ChimerSeq TCGA FAWG TCGA_RNA-Seq EDEM2-NOL4L EDEM2 chr20 35137880 - NOL4L chr20 32548886 - Exonic hg38 BRCA TCGA-C8-A138-01A 3 23 CDS-5'UTR Intra-chr q11.22 q11.21 86116 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP6V1H-CHD7 ATP6V1H chr8 53841578 - CHD7 chr8 60781000 + Exonic hg38 BRCA TCGA-C8-A138-01A 4 4 Out-of-frame Intra-chr q11.23 q12.2 Seq+ 86117 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIN1-RHOD RIN1 chr11 66336317 - RHOD chr11 67065896 + Exonic hg38 BRCA TCGA-C8-A138-01A 2 5 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 86118 ChimerSeq TCGA FAWG TCGA_RNA-Seq C17orf62-ABCA7 C17orf62 chr17 82450700 - ABCA7 chr19 1048895 + Exonic hg38 BRCA TCGA-C8-A138-01A 2 1 Out-of-frame Inter-chr q25.3 p13.3 Seq+ 86119 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP32-MIR4300HG ARHGAP32 chr11 129123446 - MIR4300HG chr11 82673187 - Exonic hg38 BRCA TCGA-C8-A1HE-01A 4 24 CDS-5'UTR Intra-chr q24.3 q14.1 86120 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF610-IGKJ4 ZNF610 chr19 52336445 + IGKJ4 chr2 88860915 - Exonic hg38 BRCA TCGA-C8-A1HG-01A 22 0 Out-of-frame Inter-chr q13.41 Transcription factor p11.2 86121 ChimerSeq TCGA FAWG TCGA_RNA-Seq HECTD2-PCGF5 HECTD2 chr10 91425410 + PCGF5 chr10 91261326 + Exonic hg38 BRCA TCGA-C8-A1HG-01A 7 11 Out-of-frame Intra-chr q23.32 q23.32 Seq+ 86122 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC1-FRY LRRC1 chr6 53795415 + FRY chr13 32131672 + Exonic hg38 BRCA TCGA-C8-A1HG-01A 1 6 Out-of-frame Inter-chr p12.1 q13.1 Seq+ 86123 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM9SF1-TSSK4 TM9SF1 chr14 24195346 - TSSK4 chr14 24207964 + Exonic hg38 BRCA TCGA-C8-A1HG-01A 1 2 5'UTR-3'UTR Intra-chr q12 q12 CAMK:TSSK 86124 ChimerSeq TCGA FAWG TCGA_RNA-Seq GGA3-SMIM5 GGA3 chr17 75261548 - SMIM5 chr17 75634034 + Exonic hg38 BRCA TCGA-C8-A1HI-01A 81 51 5'UTR-5'UTR Intra-chr q25.1 q25.1 Seq+ 86125 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPM7-TMEM104 TRPM7 chr15 50657781 - TMEM104 chr17 74835927 + Exonic hg38 BRCA TCGA-C8-A1HI-01A 9 44 Out-of-frame Inter-chr q21.2 q25.1 Seq+ 86126 ChimerSeq TCGA FAWG TCGA_RNA-Seq RMDN3-SKA2 RMDN3 chr15 40751426 - SKA2 chr17 59112345 - Exonic hg38 BRCA TCGA-C8-A1HI-01A 6 53 In-Frame Inter-chr q15.1 q22 Seq+ 86127 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARPP19-MYO5A ARPP19 chr15 52568848 - MYO5A chr15 52323444 - Exonic hg38 BRCA TCGA-C8-A1HI-01A 4 24 In-Frame Intra-chr q21.2 q21.2 Seq+ 86128 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKA2-SPDYE22P SKA2 chr17 59154956 - SPDYE22P chr17 59175127 - Exonic hg38 BRCA TCGA-C8-A1HI-01A 3 28 Out-of-frame Intra-chr q22 q22 86129 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEIS2-MYO5A MEIS2 chr15 37036814 - MYO5A chr15 52372363 - Exonic hg38 BRCA TCGA-C8-A1HI-01A 4 5 In-Frame Intra-chr q14 Transcription factor q21.2 Seq+ 86130 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC6C-SCAPER TNRC6C chr17 78051448 + SCAPER chr15 76404679 - Exonic hg38 BRCA TCGA-C8-A1HI-01A 2 6 Out-of-frame Inter-chr q25.3 q24.3 Seq+ 86131 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP8B4-DPH6 ATP8B4 chr15 50038768 - DPH6 chr15 35381916 - Exonic hg38 BRCA TCGA-C8-A1HI-01A 2 3 Out-of-frame Intra-chr q21.2 q14 86132 ChimerSeq TCGA FAWG TCGA_RNA-Seq INO80-PRKCA INO80 chr15 41079701 - PRKCA chr17 66732688 + Exonic hg38 BRCA TCGA-C8-A1HI-01A 1 3 In-Frame Inter-chr q15.1 q24.2 Seq+ 86133 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERC1-RET ERC1 chr12 1141787 + RET chr10 43116584 + Exonic hg38 BRCA TCGA-C8-A1HJ-01A 8 18 In-Frame Inter-chr q11.21 TK:Ret Oncogene KB Seq+ 86134 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP8-SLC1A7 LRP8 chr1 53280587 - SLC1A7 chr1 53134429 - Exonic hg38 BRCA TCGA-C8-A1HJ-01A 2 3 Out-of-frame Intra-chr p32.3 p32.3 Seq+ 86135 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNE1-CACNA1C SYNE1 chr6 152293588 - CACNA1C chr12 2668933 + Exonic hg38 BRCA TCGA-C8-A1HJ-01A 1 3 CDS-3'UTR Inter-chr q25.2 Oncogene p13.33 Seq+ 86136 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6R3-SSH2 PPP6R3 chr11 68554257 + SSH2 chr17 29703062 - Exonic hg38 BRCA TCGA-C8-A1HK-01A 32 84 In-Frame Inter-chr q13.2 q11.2 Seq+ 86137 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD3-OR7E126P PSMD3 chr17 39984484 + OR7E126P chr11 71903246 + Exonic hg38 BRCA TCGA-C8-A1HK-01A 26 59 Out-of-frame Inter-chr q21.1 q13.4 86138 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO1-ABHD15 ANO1 chr11 70182686 + ABHD15 chr17 29563086 - Exonic hg38 BRCA TCGA-C8-A1HK-01A 17 49 In-Frame Inter-chr q13.3 q11.2 Seq+ 86139 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLTSCR1L-CYB5R4 GLTSCR1L chr6 42823003 + CYB5R4 chr6 83934595 + Exonic hg38 BRCA TCGA-C8-A1HK-01A 6 14 Out-of-frame Intra-chr q14.2 Seq+ 86140 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF207-PPP6R3 ZNF207 chr17 32350352 + PPP6R3 chr11 68548067 + Exonic hg38 BRCA TCGA-C8-A1HK-01A 5 18 CDS-5'UTR Inter-chr q11.2 Transcription factor q13.2 Seq+ 86141 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLA2-PPFIA1 POLA2 chr11 65279626 + PPFIA1 chr11 70354301 + Exonic hg38 BRCA TCGA-C8-A1HK-01A 3 16 In-Frame Intra-chr q13.1 q13.3 Seq+ 86142 ChimerSeq TCGA FAWG TCGA_RNA-Seq APP-RAB11FIP4 APP chr21 25905024 - RAB11FIP4 chr17 31431813 + Exonic hg38 BRCA TCGA-C8-A1HK-01A 1 6 Out-of-frame Inter-chr q21.3 q11.2 86143 ChimerSeq TCGA FAWG TCGA_RNA-Seq APPBP2-DNAH17 APPBP2 chr17 60525794 - DNAH17 chr17 78441199 - Exonic hg38 BRCA TCGA-C8-A1HL-01A 4 6 In-Frame Intra-chr q23.2 q25.3 Seq+ 86144 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM24-SVOPL TRIM24 chr7 138573642 + SVOPL chr7 138596530 - Exonic hg38 BRCA TCGA-C8-A1HM-01A 33 136 Out-of-frame Intra-chr q33 Oncogene Tumor suppressor gene q34 Seq+ 86145 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM222B-BPTF FAM222B chr17 28790378 - BPTF chr17 67959541 + Exonic hg38 BRCA TCGA-C8-A1HM-01A 4 21 5'UTR-CDS Intra-chr q11.2 q24.2 Transcription factor 86146 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERVK3-KCNMA1 ERVK3 chr19 58306216 + KCNMA1 chr10 77039637 - Exonic hg38 BRCA TCGA-C8-A1HM-01A 5 11 Out-of-frame Inter-chr q22.3 86147 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREB3L2-SHANK2 CREB3L2 chr7 138001604 - SHANK2 chr11 70502931 - Exonic hg38 BRCA TCGA-C8-A1HM-01A 2 8 In-Frame Inter-chr q33 Transcription factor q13.4 Seq+ 86148 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF2P1-B4GALNT2 SMURF2P1 chr17 30600916 + B4GALNT2 chr17 49141247 + Exonic hg38 BRCA TCGA-C8-A1HM-01A 2 5 Out-of-frame Intra-chr q11.2 q21.32 86149 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARMC1-RB1CC1 ARMC1 chr8 65622263 - RB1CC1 chr8 52634968 - Exonic hg38 BRCA TCGA-C8-A1HN-01A 29 69 In-Frame Intra-chr q13.1 q11.23 Tumor suppressor gene Seq+ 86150 ChimerSeq TCGA FAWG TCGA_RNA-Seq LEMD3-XPOT LEMD3 chr12 65218619 + XPOT chr12 64439244 + Exonic hg38 BRCA TCGA-C8-A1HN-01A 13 91 In-Frame Intra-chr q14.3 q14.2 Seq+ 86151 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK1-PCDH15 DOCK1 chr10 127381368 + PCDH15 chr10 54527877 - Exonic hg38 BRCA TCGA-C8-A1HN-01A 12 50 Out-of-frame Intra-chr q26.2 q21.1 Seq+ 86152 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK1-ZNF207 TAOK1 chr17 29544075 + ZNF207 chr17 32381303 + Exonic hg38 BRCA TCGA-C8-A1HN-01A 11 52 Out-of-frame Intra-chr q11.2 q11.2 Transcription factor Seq+ 86153 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD17-RPRD1B ANKRD17 chr4 73113792 - RPRD1B chr20 38066081 + Exonic hg38 BRCA TCGA-C8-A1HN-01A 5 28 Out-of-frame Inter-chr q13.3 q11.23 Seq+ 86154 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN1-SLC9A8 PTPN1 chr20 50510590 + SLC9A8 chr20 49864728 + Exonic hg38 BRCA TCGA-C8-A1HN-01A 4 31 5'UTR-5'UTR Intra-chr q13.13 Tumor suppressor gene q13.13 Seq+ 86155 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPRD1B-ANKRD17 RPRD1B chr20 38066256 + ANKRD17 chr4 73098520 - Exonic hg38 BRCA TCGA-C8-A1HN-01A 5 24 Out-of-frame Inter-chr q11.23 q13.3 Seq+ 86156 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRBA-ESF1 LRBA chr4 150798081 - ESF1 chr20 13718984 - Exonic hg38 BRCA TCGA-C8-A1HN-01A 3 23 Out-of-frame Inter-chr q31.3 p12.1 Seq+ 86157 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNLRB1-ERGIC3 DYNLRB1 chr20 34526343 + ERGIC3 chr20 35542323 + Exonic hg38 BRCA TCGA-C8-A1HN-01A 5 12 In-Frame Intra-chr q11.22 q11.22 Seq+ 86158 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNNBL1-TTI1 CTNNBL1 chr20 37694152 + TTI1 chr20 38013857 - Exonic hg38 BRCA TCGA-C8-A1HN-01A 4 14 5'UTR-5'UTR Intra-chr q11.23 q11.23 Seq+ 86159 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSTN-TCFL5 DSTN chr20 17570211 + TCFL5 chr20 62842097 - Exonic hg38 BRCA TCGA-C8-A1HN-01A 4 14 In-Frame Intra-chr p12.1 q13.33 Transcription factor Seq+ 86160 ChimerSeq TCGA FAWG TCGA_RNA-Seq COX18-INPP4B COX18 chr4 73065250 - INPP4B chr4 142462726 - Exonic hg38 BRCA TCGA-C8-A1HN-01A 3 13 CDS-5'UTR Intra-chr q13.3 q31.21 Tumor suppressor gene Seq+ 86161 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF4EBP1-ADAM12 EIF4EBP1 chr8 38030718 + ADAM12 chr10 126046132 - Exonic hg38 BRCA TCGA-C8-A1HN-01A 2 13 Out-of-frame Inter-chr p11.23 q26.2 Seq+ 86162 ChimerSeq TCGA FAWG TCGA_RNA-Seq OVOL2-KIAA0922 OVOL2 chr20 18056657 - KIAA0922 chr4 153632718 + Exonic hg38 BRCA TCGA-C8-A1HN-01A 2 12 Out-of-frame Inter-chr p11.23 Transcription factor q31.3 Seq+ 86163 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACROD2-DCLK2 MACROD2 chr20 14002404 + DCLK2 chr4 150102478 + Exonic hg38 BRCA TCGA-C8-A1HN-01A 2 5 In-Frame Inter-chr p12.1 q31.23 CAMK:DCAMKL Seq+ 86164 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMBR1-TPRG1 LMBR1 chr7 156796389 - TPRG1 chr3 189238733 + Exonic hg38 BRCA TCGA-C8-A1HN-01A 1 4 Out-of-frame Inter-chr q36.3 q28 Seq+ 86165 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR158-MYO16 GPR158 chr10 25176322 + MYO16 chr13 108992376 + Exonic hg38 BRCA TCGA-C8-A1HO-01A 69 85 In-Frame Inter-chr p12.1 Seq+ 86166 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR1-TACC1 FGFR1 chr8 38418228 - TACC1 chr8 38788704 + Exonic hg38 BRCA TCGA-C8-A1HO-01A 8 59 In-Frame Intra-chr p11.23 TK:FGFR Oncogene p11.22 KB Pub Seq+ 86167 ChimerSeq TCGA FAWG TCGA_RNA-Seq CALCOCO2-ARSG CALCOCO2 chr17 48831078 + ARSG chr17 68420189 + Exonic hg38 BRCA TCGA-C8-A1HO-01A 14 0 5'UTR-CDS Intra-chr q21.32 q24.2 Seq+ 86168 ChimerSeq TCGA FAWG TCGA_RNA-Seq AXIN2-LRRC37A3 AXIN2 chr17 65541455 - LRRC37A3 chr17 64855889 - Exonic hg38 BRCA TCGA-C8-A1HO-01A 9 15 In-Frame Intra-chr q24.1 Tumor suppressor gene q24.1 Seq+ 86169 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEX2-TANC2 TEX2 chr17 64212574 - TANC2 chr17 63237814 + Exonic hg38 BRCA TCGA-C8-A1HO-01A 3 17 Out-of-frame Intra-chr q23.3 q23.2 Seq+ 86170 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD3-TACC1 NSD3 chr8 38381799 - TACC1 chr8 38788704 + Exonic hg38 BRCA TCGA-C8-A1HO-01A 2 16 5'UTR-5'UTR Intra-chr p11.23 Tumor suppressor gene p11.22 86171 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNPTAB-USP36 GNPTAB chr12 101764202 - USP36 chr17 78787658 - Exonic hg38 BRCA TCGA-C8-A1HO-01A 5 3 CDS-3'UTR Inter-chr q23.2 q25.3 86172 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-CACNA1G NF1 chr17 31265339 + CACNA1G chr17 50599428 + Exonic hg38 BRCA TCGA-C8-A1HO-01A 2 8 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q21.33 Seq+ 86173 ChimerSeq TCGA FAWG TCGA_RNA-Seq DECR1-FAM110B DECR1 chr8 90021056 + FAM110B chr8 58145907 + Exonic hg38 BRCA TCGA-C8-A1HO-01A 1 11 5'UTR-5'UTR Intra-chr q21.3 q12.1 86174 ChimerSeq TCGA FAWG TCGA_RNA-Seq DUSP14-PHB DUSP14 chr17 37489958 + PHB chr17 49409473 - Exonic hg38 BRCA TCGA-C8-A1HO-01A 1 10 3'UTR-CDS Intra-chr q12 q21.33 Tumor suppressor gene Seq+ 86175 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD17-KCNIP4 ANKRD17 chr4 73113792 - KCNIP4 chr4 20734735 - Exonic hg38 BRCA TCGA-C8-A1HO-01A 3 1 In-Frame Intra-chr q13.3 p15.2 86176 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC148-WDSUB1 CCDC148 chr2 158309433 - WDSUB1 chr2 159236190 - Exonic hg38 BRCA TCGA-C8-A1HO-01A 2 5 Out-of-frame Intra-chr q24.1 q24.2 Seq+ 86177 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXK2-PITPNC1 FOXK2 chr17 82587272 + PITPNC1 chr17 67669508 + Exonic hg38 BRCA TCGA-C8-A1HO-01A 1 9 Out-of-frame Intra-chr q25.3 Transcription factor q24.2 Seq+ 86178 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCHSD2-RALYL FCHSD2 chr11 72984088 - RALYL chr8 84920894 + Exonic hg38 BRCA TCGA-C8-A1HO-01A 1 7 In-Frame Inter-chr q13.4 q21.2 Seq+ 86179 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB2-TEX14 GRB2 chr17 75405489 - TEX14 chr17 58630554 - Exonic hg38 BRCA TCGA-C8-A1HO-01A 2 3 5'UTR-CDS Intra-chr q25.1 q22 Seq+ 86180 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXNDC16-GPR137C TXNDC16 chr14 52470037 - GPR137C chr14 52632160 + Exonic hg38 BRCA TCGA-C8-A26V-01A 9 18 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 86181 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERO1A-TXNDC16 ERO1A chr14 52695368 - TXNDC16 chr14 52470680 - Exonic hg38 BRCA TCGA-C8-A26V-01A 3 12 Out-of-frame Intra-chr q22.1 q22.1 86182 ChimerSeq TCGA FAWG TCGA_RNA-Seq COG6-MAPK8 COG6 chr13 39660881 + MAPK8 chr10 48431193 + Exonic hg38 BRCA TCGA-C8-A26V-01A 2 12 Out-of-frame Inter-chr q14.11 q11.22 Oncogene Seq+ 86183 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPPE1-PIEZO2 MPPE1 chr18 11889387 - PIEZO2 chr18 10871415 - Exonic hg38 BRCA TCGA-C8-A26V-01A 3 2 In-Frame Intra-chr p11.21 p11.21 Seq+ 86184 ChimerSeq TCGA FAWG TCGA_RNA-Seq CADM2-FHIT CADM2 chr3 85802196 + FHIT chr3 60536979 - Exonic hg38 BRCA TCGA-C8-A26V-01A 2 5 5'UTR-5'UTR Intra-chr p12.1 Tumor suppressor gene p14.2 Tumor suppressor gene Seq+ 86185 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERO1A-GPR137C ERO1A chr14 52695368 - GPR137C chr14 52632160 + Exonic hg38 BRCA TCGA-C8-A26V-01A 2 4 In-Frame Intra-chr q22.1 q22.1 86186 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGB6-BAZ2B ITGB6 chr2 160107679 - BAZ2B chr2 159478721 - Exonic hg38 BRCA TCGA-C8-A26W-01A 120 253 CDS-5'UTR Intra-chr q24.2 q24.2 Transcription factor Seq+ 86187 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIP4K2B-TMEM99 PIP4K2B chr17 38777687 - TMEM99 chr17 40833115 + Exonic hg38 BRCA TCGA-C8-A26W-01A 12 37 5'UTR-5'UTR Intra-chr q12 q21.2 Seq+ 86188 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK1-YWHAEP7 TAOK1 chr17 29530619 + YWHAEP7 chr17 37855229 - Exonic hg38 BRCA TCGA-C8-A26W-01A 9 30 CDS-5'UTR Intra-chr q11.2 q12 86189 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2D2-PAIP1 UBE2D2 chr5 139561815 + PAIP1 chr5 43555999 - Exonic hg38 BRCA TCGA-C8-A26W-01A 6 13 Out-of-frame Intra-chr q31.2 p12 Seq+ 86190 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKN1-LDLR PKN1 chr19 14446561 + LDLR chr19 11116859 + Exonic hg38 BRCA TCGA-C8-A26W-01A 2 16 In-Frame Intra-chr p13.12 AGC:PKN p13.2 Seq+ 86191 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK2-PIGX PAK2 chr3 196740157 + PIGX chr3 196716858 + Exonic hg38 BRCA TCGA-C8-A26W-01A 4 6 5'UTR-CDS Intra-chr q29 STE:STE20 q29 Seq+ 86192 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIX-DAND5 NFIX chr19 13090390 + DAND5 chr19 12973389 + Exonic hg38 BRCA TCGA-C8-A26X-01A 37 66 In-Frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 86193 ChimerSeq TCGA FAWG TCGA_RNA-Seq NLK-BCAS3 NLK chr17 28168657 + BCAS3 chr17 60989971 + Exonic hg38 BRCA TCGA-C8-A26X-01A 20 17 In-Frame Intra-chr q11.2 CMGC:MAPK q23.2 Seq+ 86194 ChimerSeq TCGA FAWG TCGA_RNA-Seq BSDC1-YARS BSDC1 chr1 32386779 - YARS chr1 32811057 - Exonic hg38 BRCA TCGA-C8-A26X-01A 13 40 In-Frame Intra-chr p35.1 p35.1 Seq+ 86195 ChimerSeq TCGA FAWG TCGA_RNA-Seq JDP2-VRTN JDP2 chr14 75461530 + VRTN chr14 74356783 + Exonic hg38 BRCA TCGA-C8-A26X-01A 13 29 CDS-5'UTR Intra-chr q24.3 Tumor suppressor gene Transcription factor q24.3 Seq+ 86196 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1XR1-PIK3CA TBL1XR1 chr3 177197121 - PIK3CA chr3 179198750 + Exonic hg38 BRCA TCGA-C8-A26X-01A 12 12 5'UTR-5'UTR Intra-chr q26.32 q26.32 Oncogene Seq+ 86197 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM28-KMT2C RBM28 chr7 128321266 - KMT2C chr7 152185631 - Exonic hg38 BRCA TCGA-C8-A26X-01A 2 50 Out-of-frame Intra-chr q32.1 q36.1 Oncogene Tumor suppressor gene Seq+ 86198 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLLT6-ACE MLLT6 chr17 38712014 + ACE chr17 63496394 + Exonic hg38 BRCA TCGA-C8-A26X-01A 4 34 3'UTR-CDS Intra-chr q12 q23.3 Seq+ 86199 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGB4-SLC16A5 ITGB4 chr17 75751111 + SLC16A5 chr17 75098038 + Exonic hg38 BRCA TCGA-C8-A26X-01A 9 11 In-Frame Intra-chr q25.1 q25.1 Seq+ 86200 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK11-GPX4 STK11 chr19 1222006 + GPX4 chr19 1105186 + Exonic hg38 BRCA TCGA-C8-A26X-01A 4 24 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 86201 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLTC-PRR11 CLTC chr17 59620173 + PRR11 chr17 59169748 + Exonic hg38 BRCA TCGA-C8-A26X-01A 4 11 CDS-5'UTR Intra-chr q23.1 q22 Seq+ 86202 ChimerSeq TCGA FAWG TCGA_RNA-Seq INPP5B-SF3A3 INPP5B chr1 37931673 - SF3A3 chr1 37960175 - Exonic hg38 BRCA TCGA-C8-A26X-01A 4 5 In-Frame Intra-chr p34.3 p34.3 Seq+ 86203 ChimerSeq TCGA FAWG TCGA_RNA-Seq BLVRA-STK17A BLVRA chr7 43803847 + STK17A chr7 43595901 + Exonic hg38 BRCA TCGA-C8-A26X-01A 2 3 In-Frame Intra-chr p13 p13 Seq+ 86204 ChimerSeq TCGA FAWG TCGA_RNA-Seq ODF2-SLC27A4 ODF2 chr9 128469353 + SLC27A4 chr9 128343127 + Exonic hg38 BRCA TCGA-C8-A26X-01A 1 4 CDS-5'UTR Intra-chr q34.11 q34.11 Seq+ 86205 ChimerSeq TCGA FAWG TCGA_RNA-Seq SREBF2-FMNL2 SREBF2 chr22 41894937 + FMNL2 chr2 152607339 + Exonic hg38 BRCA TCGA-C8-A26Y-01A 11 54 Out-of-frame Inter-chr q13.2 Transcription factor q23.3 Seq+ 86206 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNH7-SLC38A11 KCNH7 chr2 162836537 - SLC38A11 chr2 164939556 - Exonic hg38 BRCA TCGA-C8-A26Y-01A 6 28 In-Frame Intra-chr q24.2 q24.3 Seq+ 86207 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP31-NPIPB5 USP31 chr16 23148638 - NPIPB5 chr16 22523820 + Exonic hg38 BRCA TCGA-C8-A26Y-01A 7 16 CDS-3'UTR Intra-chr p12.2 p12.2 86208 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAB2IP-WDR38 DAB2IP chr9 121763879 + WDR38 chr9 124854205 + Exonic hg38 BRCA TCGA-C8-A26Y-01A 4 4 Out-of-frame Intra-chr q33.2 Tumor suppressor gene q33.3 Seq+ 86209 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF567-TPM3P9 ZNF567 chr19 36689497 + TPM3P9 chr19 53441796 + Exonic hg38 BRCA TCGA-C8-A26Y-01A 2 9 5'UTR-5'UTR Intra-chr q13.12 Transcription factor q13.42 Seq+ 86210 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNNA3-LRRC74A CTNNA3 chr10 67521842 - LRRC74A chr14 76836207 + Exonic hg38 BRCA TCGA-C8-A26Y-01A 2 2 In-Frame Inter-chr q21.3 Tumor suppressor gene q24.3 86211 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDFY3-KCNIP4 WDFY3 chr4 84713159 - KCNIP4 chr4 21763032 - Exonic hg38 BRCA TCGA-C8-A26Y-01A 1 5 CDS-5'UTR Intra-chr q21.23 p15.2 86212 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIX-RAD23A NFIX chr19 13025552 + RAD23A chr19 12949275 + Exonic hg38 BRCA TCGA-C8-A26Y-01A 1 3 In-Frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 86213 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF567-ZNF761 ZNF567 chr19 36689497 + ZNF761 chr19 53445001 + Exonic hg38 BRCA TCGA-C8-A26Y-01A 1000 1000 5'UTR-5'UTR Intra-chr q13.12 Transcription factor q13.42 Transcription factor 86214 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP48-NPIPB3 USP48 chr16 23148638 - NPIPB3 chr16 21415085 - Exonic hg38 BRCA TCGA-C8-A26Y-01A 1000 1000 5'UTR-3'UTR Intra-chr p36.12 p12.2 86215 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAE1-ZBTB45 SAE1 chr19 47143605 + ZBTB45 chr19 58517673 - Exonic hg38 BRCA TCGA-C8-A26Z-01A 13 27 5'UTR-5'UTR Intra-chr q13.32 q13.43 Transcription factor Seq+ 86216 ChimerSeq TCGA FAWG TCGA_RNA-Seq FUT8-AGBL4 FUT8 chr14 65411993 + AGBL4 chr1 49245864 - Exonic hg38 BRCA TCGA-C8-A26Z-01A 1 17 5'UTR-CDS Inter-chr q23.3 p33 Seq+ 86217 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD9A-ENPP7P7 RAD9A chr11 67321333 + ENPP7P7 chr11 67873341 - Exonic hg38 BRCA TCGA-C8-A26Z-01A 3 7 Out-of-frame Intra-chr q13.2 q13.2 86218 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADIPOR2-CACNA2D4 ADIPOR2 chr12 1754514 + CACNA2D4 chr12 1810340 - Exonic hg38 BRCA TCGA-C8-A26Z-01A 2 9 3'UTR-5'UTR Intra-chr p13.33 p13.33 Seq+ 86219 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2Z-FKBP5 UBE2Z chr17 48922937 + FKBP5 chr6 35637158 - Exonic hg38 BRCA TCGA-C8-A26Z-01A 2 1 In-Frame Inter-chr q21.32 p21.31 Seq+ 86220 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK8-GLIPR2 DOCK8 chr9 449927 + GLIPR2 chr9 36162362 + Exonic hg38 BRCA TCGA-C8-A26Z-01A 1 3 Out-of-frame Intra-chr p24.3 p13.3 86221 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHCYL1-MAN1A2 AHCYL1 chr1 109985172 + MAN1A2 chr1 117402186 + Exonic hg38 BRCA TCGA-C8-A26Z-01A 1 2 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p12 86222 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSP2-METTL1 CTDSP2 chr12 57846372 - METTL1 chr12 57771257 - Exonic hg38 BRCA TCGA-C8-A26Z-01A 1000 1000 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 86223 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOP1-C17orf64 TOP1 chr20 41101353 + C17orf64 chr17 60425783 + Exonic hg38 BRCA TCGA-C8-A273-01A 60 231 In-Frame Inter-chr q12 Oncogene q23.2 Seq+ 86224 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2S2-DEFB123 EIF2S2 chr20 34112096 - DEFB123 chr20 31450029 + Exonic hg38 BRCA TCGA-C8-A273-01A 40 123 Out-of-frame Intra-chr q11.22 q11.21 Seq+ 86225 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARD6B-CASS4 PARD6B chr20 50738079 + CASS4 chr20 56445900 + Exonic hg38 BRCA TCGA-C8-A273-01A 19 39 Out-of-frame Intra-chr q13.13 q13.31 Seq+ 86226 ChimerSeq TCGA FAWG TCGA_RNA-Seq MMD-NOL4L MMD chr17 55407746 - NOL4L chr20 32548886 - Exonic hg38 BRCA TCGA-C8-A273-01A 6 41 CDS-5'UTR Inter-chr q22 q11.21 86227 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFP28-SLC9A8 ZFP28 chr19 56550605 + SLC9A8 chr20 49839541 + Exonic hg38 BRCA TCGA-C8-A273-01A 8 28 In-Frame Inter-chr q13.43 Transcription factor q13.13 Seq+ 86228 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTFDC1-PARD6B RTFDC1 chr20 56468766 + PARD6B chr20 50749659 + Exonic hg38 BRCA TCGA-C8-A273-01A 10 10 Out-of-frame Intra-chr q13.31 q13.13 Seq+ 86229 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2C-CNTNAP2 KMT2C chr7 152435626 - CNTNAP2 chr7 146774271 + Exonic hg38 BRCA TCGA-C8-A273-01A 2 40 CDS-3'UTR Intra-chr q36.1 Oncogene Tumor suppressor gene Tumor suppressor gene 86230 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPD-SKAP1 CPD chr17 30385236 + SKAP1 chr17 48396785 - Exonic hg38 BRCA TCGA-C8-A273-01A 5 4 In-Frame Intra-chr q11.2 Tumor suppressor gene q21.32 Seq+ 86231 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP32-UBE2O USP32 chr17 60223411 - UBE2O chr17 76405572 - Exonic hg38 BRCA TCGA-C8-A273-01A 1 20 In-Frame Intra-chr q23.2 q25.1 86232 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPRD1B-RALY RPRD1B chr20 38066256 + RALY chr20 34072066 + Exonic hg38 BRCA TCGA-C8-A273-01A 3 11 CDS-5'UTR Intra-chr q11.23 q11.22 Seq+ 86233 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L1-TUBD1 EPB41L1 chr20 36122747 + TUBD1 chr17 59863847 - Exonic hg38 BRCA TCGA-C8-A273-01A 1 17 5'UTR-CDS Inter-chr q11.23 q23.1 86234 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC16A5-UNK SLC16A5 chr17 75089304 + UNK chr17 75816770 + Exonic hg38 BRCA TCGA-C8-A273-01A 2 3 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 86235 ChimerSeq TCGA FAWG TCGA_RNA-Seq OPHN1-MAOA OPHN1 chrX 68192919 - MAOA chrX 43731241 + Exonic hg38 BRCA TCGA-C8-A273-01A 1 5 Out-of-frame Intra-chr q12 p11.3 Seq+ 86236 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCD2-HCK SMARCD2 chr17 63842381 - HCK chr20 32071662 + Exonic hg38 BRCA TCGA-C8-A273-01A 1 5 5'UTR-5'UTR Inter-chr q23.3 q11.21 TK:Src Seq+ 86237 ChimerSeq TCGA FAWG TCGA_RNA-Seq NBEAL2-TMC2 NBEAL2 chr3 46979912 + TMC2 chr20 2579146 + Exonic hg38 BRCA TCGA-C8-A274-01A 3 7 In-Frame Inter-chr p21.31 p13 Seq+ 86238 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSI2-PRR15L MSI2 chr17 57627303 + PRR15L chr17 47953263 - Exonic hg38 BRCA TCGA-C8-A275-01A 39 75 CDS-5'UTR Intra-chr q22 q21.32 Seq+ 86239 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP32-SCPEP1 USP32 chr17 60252381 - SCPEP1 chr17 56998374 + Exonic hg38 BRCA TCGA-C8-A275-01A 24 83 Out-of-frame Intra-chr q23.2 q22 Seq+ 86240 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXNRD1-USP30 TXNRD1 chr12 104289040 + USP30 chr12 109067524 + Exonic hg38 BRCA TCGA-C8-A275-01A 21 46 Out-of-frame Intra-chr q23.3 q24.11 Seq+ 86241 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD4-FTCD SETD4 chr21 36060347 - FTCD chr21 46138923 - Exonic hg38 BRCA TCGA-C8-A275-01A 10 52 5'UTR-5'UTR Intra-chr q22.12 Seq+ 86242 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD3-STRADA STARD3 chr17 39637231 + STRADA chr17 63714108 - Exonic hg38 BRCA TCGA-C8-A275-01A 17 16 5'UTR-5'UTR Intra-chr q12 q23.3 Tumor suppressor gene Seq+ 86243 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSI2-EFCAB5 MSI2 chr17 57529724 + EFCAB5 chr17 30051118 + Exonic hg38 BRCA TCGA-C8-A275-01A 3 62 Out-of-frame Intra-chr q22 q11.2 Seq+ 86244 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC2-SSH2 TANC2 chr17 63009626 + SSH2 chr17 29677741 - Exonic hg38 BRCA TCGA-C8-A275-01A 11 17 Out-of-frame Intra-chr q23.2 q11.2 Seq+ 86245 ChimerSeq TCGA FAWG TCGA_RNA-Seq VMP1-CDC42EP4 VMP1 chr17 59811786 + CDC42EP4 chr17 73286612 - Exonic hg38 BRCA TCGA-C8-A275-01A 6 20 CDS-5'UTR Intra-chr q23.1 q25.1 Seq+ 86246 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO18A-ERBB2 MYO18A chr17 29137016 - ERBB2 chr17 39723319 + Exonic hg38 BRCA TCGA-C8-A275-01A 4 17 5'UTR-5'UTR Intra-chr q11.2 Oncogene q12 Oncogene Seq+ 86247 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKAP1-YPEL2 SKAP1 chr17 48345905 - YPEL2 chr17 59388327 + Exonic hg38 BRCA TCGA-C8-A275-01A 6 5 Out-of-frame Intra-chr q21.32 q22 Seq+ 86248 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCM3AP-APP MCM3AP chr21 46242802 - APP chr21 25897673 - Exonic hg38 BRCA TCGA-C8-A275-01A 2 14 Out-of-frame Intra-chr q22.3 q21.3 Seq+ 86249 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM25-DLX3 TRIM25 chr17 56913392 - DLX3 chr17 49995126 - Exonic hg38 BRCA TCGA-C8-A275-01A 3 5 CDS-5'UTR Intra-chr q22 q21.33 Transcription factor Seq+ 86250 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKS1-CCR7 MKS1 chr17 58212378 - CCR7 chr17 40558942 - Exonic hg38 BRCA TCGA-C8-A275-01A 2 5 Out-of-frame Intra-chr q22 q21.2 Seq+ 86251 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRIP1-CUEDC1 BRIP1 chr17 61776401 - CUEDC1 chr17 57885879 - Exonic hg38 BRCA TCGA-C8-A275-01A 2 4 CDS-5'UTR Intra-chr q23.2 Oncogene q22 Seq+ 86252 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM97-SKAP1 TMEM97 chr17 28319365 + SKAP1 chr17 48396785 - Exonic hg38 BRCA TCGA-C8-A275-01A 1 4 Out-of-frame Intra-chr q11.2 q21.32 86253 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM222B-GIP FAM222B chr17 28766586 - GIP chr17 48967253 - Exonic hg38 BRCA TCGA-C8-A275-01A 1 2 5'UTR-5'UTR Intra-chr q11.2 q21.32 86254 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBX1-RHBG PBX1 chr1 164812149 + RHBG chr1 156384527 + Exonic hg38 BRCA TCGA-C8-A278-01A 17 44 In-Frame Intra-chr q23.3 Oncogene Transcription factor q22 Seq+ 86255 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-CDC6 FBXL20 chr17 39401361 - CDC6 chr17 40289408 + Exonic hg38 BRCA TCGA-C8-A278-01A 17 20 CDS-3'UTR Intra-chr q12 q21.2 Seq+ 86256 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLLT10-SNTG1 MLLT10 chr10 21735235 + SNTG1 chr8 50502778 + Exonic hg38 BRCA TCGA-C8-A278-01A 7 7 In-Frame Inter-chr p12.31 Oncogene q11.21 Seq+ 86257 ChimerSeq TCGA FAWG TCGA_RNA-Seq C16orf72-ACSM2A C16orf72 chr16 9093001 + ACSM2A chr16 20460107 + Exonic hg38 BRCA TCGA-C8-A278-01A 4 18 CDS-5'UTR Intra-chr p13.2 p12.3 Seq+ 86258 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-WIPF2 FBXL20 chr17 39401361 - WIPF2 chr17 40278185 + Exonic hg38 BRCA TCGA-C8-A278-01A 5 4 Out-of-frame Intra-chr q12 q21.2 86259 ChimerSeq TCGA FAWG TCGA_RNA-Seq PATJ-ERI3 PATJ chr1 61990364 + ERI3 chr1 44313228 - Exonic hg38 BRCA TCGA-C8-A278-01A 2 6 In-Frame Intra-chr p31.3 p34.1 86260 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX40-ACSM2B DHX40 chr17 59588053 + ACSM2B chr16 20540773 - Exonic hg38 BRCA TCGA-C8-A278-01A 1 4 Out-of-frame Inter-chr q23.1 p12.3 Seq+ 86261 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKIV2L2-CETN3 SKIV2L2 chr5 55366875 + CETN3 chr5 90394107 - Exonic hg38 BRCA TCGA-C8-A27A-01A 19 101 Out-of-frame Intra-chr q11.2 q14.3 Seq+ 86262 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASAP1-CLVS1 ASAP1 chr8 130358017 - CLVS1 chr8 61454141 + Exonic hg38 BRCA TCGA-C8-A27A-01A 12 64 In-Frame Intra-chr q24.22 q12.2 Seq+ 86263 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSMAF-LETM2 NSMAF chr8 58597387 - LETM2 chr8 38400272 + Exonic hg38 BRCA TCGA-C8-A27A-01A 5 26 Out-of-frame Intra-chr q12.1 p11.23 Seq+ 86264 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD7-TACC1 CHD7 chr8 60781430 + TACC1 chr8 38742351 + Exonic hg38 BRCA TCGA-C8-A27A-01A 5 12 CDS-5'UTR Intra-chr q12.2 p11.22 Seq+ 86265 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASC11-PVT1 CASC11 chr8 127703050 - PVT1 chr8 127855155 + Exonic hg38 BRCA TCGA-C8-A27A-01A 3 17 3'UTR-5'UTR Intra-chr q24.21 q24.21 Seq+ 86266 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK5RAP3-RNF43 CDK5RAP3 chr17 47974448 + RNF43 chr17 58371033 - Exonic hg38 BRCA TCGA-C8-A27A-01A 2 21 Out-of-frame Intra-chr q21.32 q22 Oncogene Seq+ 86267 ChimerSeq TCGA FAWG TCGA_RNA-Seq C15orf41-LYSMD4 C15orf41 chr15 36709961 + LYSMD4 chr15 99732007 - Exonic hg38 BRCA TCGA-C8-A27A-01A 1 17 CDS-5'UTR Intra-chr q14 q26.3 Seq+ 86268 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF43-NFE2L1 RNF43 chr17 58362544 - NFE2L1 chr17 48051117 + Exonic hg38 BRCA TCGA-C8-A27A-01A 3 9 CDS-5'UTR Intra-chr q22 Oncogene q21.32 Transcription factor Seq+ 86269 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOV10L1-NAV2 MOV10L1 chr22 50117351 + NAV2 chr11 19984125 + Exonic hg38 BRCA TCGA-C8-A27A-01A 3 4 In-Frame Inter-chr q13.33 p15.1 Seq+ 86270 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13B-NECAB1 VPS13B chr8 99442635 + NECAB1 chr8 90917492 + Exonic hg38 BRCA TCGA-C8-A27A-01A 1 8 Out-of-frame Intra-chr q22.2 q21.3 Seq+ 86271 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD3-UNC5D NSD3 chr8 38381799 - UNC5D chr8 35549292 + Exonic hg38 BRCA TCGA-C8-A27A-01A 1 5 5'UTR-CDS Intra-chr p11.23 Tumor suppressor gene p12 Tumor suppressor gene 86272 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13B-POLR2K VPS13B chr8 99103120 + POLR2K chr8 100151824 + Exonic hg38 BRCA TCGA-C8-A27A-01A 1 4 In-Frame Intra-chr q22.2 q22.2 86273 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEMF-SOS2 NEMF chr14 49833423 - SOS2 chr14 50120384 - Exonic hg38 BRCA TCGA-C8-A27B-01A 4 43 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 86274 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLM1-ZCCHC6 GOLM1 chr9 86077412 - ZCCHC6 chr9 86305239 - Exonic hg38 BRCA TCGA-C8-A27B-01A 2 18 Out-of-frame Intra-chr q21.33 q21.33 Seq+ 86275 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-PATL1 SHANK2 chr11 71147120 - PATL1 chr11 59666964 - Exonic hg38 BRCA TCGA-C8-A27B-01A 4 7 In-Frame Intra-chr q13.4 q12.1 Seq+ 86276 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAA20-ATP8B4 NAA20 chr20 20032653 + ATP8B4 chr15 49981294 - Exonic hg38 BRCA TCGA-C8-A27B-01A 4 6 In-Frame Inter-chr p11.23 q21.2 Seq+ 86277 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOX5-DTD2 SOX5 chr12 23734684 - DTD2 chr14 31453344 - Exonic hg38 BRCA TCGA-C8-A27B-01A 1 6 In-Frame Inter-chr p12.1 Transcription factor q12 86278 ChimerSeq TCGA FAWG TCGA_RNA-Seq OBSCN-SPAG17 OBSCN chr1 228277313 + SPAG17 chr1 118151369 - Exonic hg38 BRCA TCGA-C8-A27B-01A 1 3 Out-of-frame Intra-chr q42.13 p12 86279 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNNA1-SRSF4 CTNNA1 chr5 138812302 + SRSF4 chr1 29168638 - Exonic hg38 BRCA TCGA-C8-A3M7-01A 1 4 Out-of-frame Inter-chr q31.2 Oncogene p35.3 86280 ChimerSeq TCGA FAWG TCGA_RNA-Seq THEM4-DCST2 THEM4 chr1 151909360 - DCST2 chr1 155026715 - Exonic hg38 BRCA TCGA-C8-A3M8-01A 11 35 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 86281 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13B-GMDS VPS13B chr8 99832652 + GMDS chr6 1742586 - Exonic hg38 BRCA TCGA-C8-A3M8-01A 10 15 Out-of-frame Inter-chr q22.2 p25.3 Seq+ 86282 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAG3L3-FAM196B STAG3L3 chr7 72998676 - FAM196B chr5 169884816 - Exonic hg38 BRCA TCGA-C8-A3M8-01A 4 15 Out-of-frame Inter-chr q11.23 q35.1 Seq+ 86283 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTOV1-NPAS1 PTOV1 chr19 49860336 + NPAS1 chr19 47021006 + Exonic hg38 BRCA TCGA-C8-A3M8-01A 1 6 5'UTR-5'UTR Intra-chr q13.33 q13.32 Transcription factor 86284 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAM10-PLAC9 ADAM10 chr15 58749480 - PLAC9 chr10 80142082 + Exonic hg38 BRCA TCGA-C8-A8HP-01A 20 123 In-Frame Inter-chr q21.3 q22.3 Seq+ 86285 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD12-C10orf11 ANKRD12 chr18 9136965 + C10orf11 chr10 76058666 + Exonic hg38 BRCA TCGA-C8-A8HP-01A 14 57 Out-of-frame Inter-chr p11.22 Seq+ 86286 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED29-MYO1D MED29 chr19 39393637 + MYO1D chr17 32749006 - Exonic hg38 BRCA TCGA-C8-A8HP-01A 7 16 In-Frame Inter-chr q13.2 q11.2 Seq+ 86287 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPF6-SDC4 PRPF6 chr20 63995092 + SDC4 chr20 45335920 - Exonic hg38 BRCA TCGA-C8-A8HP-01A 3 13 In-Frame Intra-chr q13.33 q13.12 Seq+ 86288 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARA-LGALS16 RARA chr17 40309286 + LGALS16 chr19 39657828 + Exonic hg38 BRCA TCGA-C8-A8HP-01A 1 17 5'UTR-CDS Inter-chr q21.2 Oncogene Transcription factor q13.2 Seq+ 86289 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLX4-ADAM32 SLX4 chr16 3600979 - ADAM32 chr8 39257187 + Exonic hg38 BRCA TCGA-C8-A8HP-01A 1 15 CDS-3'UTR Inter-chr p13.3 Tumor suppressor gene Seq+ 86290 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-SDF4 ERBB2 chr17 39700311 + SDF4 chr1 1223968 - Exonic hg38 BRCA TCGA-C8-A8HP-01A 2 9 Out-of-frame Inter-chr q12 Oncogene p36.33 Seq+ 86291 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPBP1L1-TRAPPC9 GPBP1L1 chr1 45686412 - TRAPPC9 chr8 140397745 - Exonic hg38 BRCA TCGA-C8-A8HQ-01A 2 23 5'UTR-CDS Inter-chr p34.1 Transcription factor q24.3 Seq+ 86292 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTN3-NDUFS8 RTN3 chr11 63681778 + NDUFS8 chr11 68032152 + Exonic hg38 BRCA TCGA-C8-A8HQ-01A 3 8 5'UTR-5'UTR Intra-chr q13.1 q13.2 Seq+ 86293 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC9-SSBP3 TRAPPC9 chr8 139885879 - SSBP3 chr1 54241509 - Exonic hg38 BRCA TCGA-C8-A8HQ-01A 2 2 Out-of-frame Inter-chr q24.3 p32.3 86294 ChimerSeq TCGA FAWG TCGA_RNA-Seq C11orf80-PPP6R3 C11orf80 chr11 66759096 + PPP6R3 chr11 68519501 + Exonic hg38 BRCA TCGA-C8-A8HQ-01A 1 4 CDS-5'UTR Intra-chr q13.2 q13.2 Seq+ 86295 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUNX1-DTD1 RUNX1 chr21 34880557 - DTD1 chr20 18744100 + Exonic hg38 BRCA TCGA-C8-A8HR-01A 10 37 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor p11.23 Seq+ 86296 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPN1-IGHJ4 EPN1 chr19 55695871 + IGHJ4 chr14 105864257 - Exonic hg38 BRCA TCGA-C8-A8HR-01A 8 0 Out-of-frame Inter-chr q13.42 86297 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXW2-LTBP2 FBXW2 chr9 120776093 - LTBP2 chr14 74525225 - Exonic hg38 BRCA TCGA-C8-A8HR-01A 1 5 Out-of-frame Inter-chr q33.2 q24.3 Seq+ 86298 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRC2A-NCR3 PRRC2A chr6 31636608 + NCR3 chr6 31589899 - Exonic hg38 BRCA TCGA-D8-A13Y-01A 19 218 3'UTR-5'UTR Intra-chr Seq+ 86299 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTF1-BCL7C CTF1 chr16 30899533 + BCL7C chr16 30888945 - Exonic hg38 BRCA TCGA-D8-A13Y-01A 10 21 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 86300 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM57B-GSG1L FAM57B chr16 30029432 - GSG1L chr16 27963203 - Exonic hg38 BRCA TCGA-D8-A13Y-01A 12 13 Out-of-frame Intra-chr p11.2 p12.1 Seq+ 86301 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLEC16A-LITAF CLEC16A chr16 11126146 + LITAF chr16 11556735 - Exonic hg38 BRCA TCGA-D8-A13Y-01A 5 35 CDS-5'UTR Intra-chr p13.13 p13.13 Tumor suppressor gene Seq+ 86302 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF3C1-MIR762HG GTF3C1 chr16 27537784 - MIR762HG chr16 30894548 + Exonic hg38 BRCA TCGA-D8-A13Y-01A 1 21 CDS-5'UTR Intra-chr p12.1 p11.2 86303 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPRIN2-AMN1 CAPRIN2 chr12 30716508 - AMN1 chr12 31719356 - Exonic hg38 BRCA TCGA-D8-A13Y-01A 1 14 CDS-5'UTR Intra-chr p11.21 p11.21 Seq+ 86304 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA2026-CYP20A1 KIAA2026 chr9 5910615 - CYP20A1 chr2 203280059 + Exonic hg38 BRCA TCGA-D8-A13Y-01A 2 3 3'UTR-CDS Inter-chr p24.1 q33.2 86305 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE10A-POLB PDE10A chr6 165661947 - POLB chr8 42371563 + Exonic hg38 BRCA TCGA-D8-A13Z-01A 54 174 In-Frame Inter-chr q27 p11.21 Seq+ 86306 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTN2A1-HIST1H2AC BTN2A1 chr6 26466088 + HIST1H2AC chr6 26138054 + Exonic hg38 BRCA TCGA-D8-A13Z-01A 27 137 CDS-3'UTR Intra-chr p22.2 p22.2 Seq+ 86307 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRLR-PLCXD3 PRLR chr5 35230268 - PLCXD3 chr5 41382534 - Exonic hg38 BRCA TCGA-D8-A13Z-01A 12 56 5'UTR-CDS Intra-chr p13.2 p13.1 Seq+ 86308 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR2-CCDC6 FGFR2 chr10 121483698 - CCDC6 chr10 59852702 - Exonic hg38 BRCA TCGA-D8-A13Z-01A 9 36 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q21.2 Seq+ 86309 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRA-ANAPC10 PTPRA chr20 3038129 + ANAPC10 chr4 144995603 - Exonic hg38 BRCA TCGA-D8-A13Z-01A 9 19 In-Frame Inter-chr p13 q31.21 Seq+ 86310 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARFIP1-FGB ARFIP1 chr4 152829726 + FGB chr4 154565808 + Exonic hg38 BRCA TCGA-D8-A13Z-01A 6 20 In-Frame Intra-chr q31.3 q31.3 Seq+ 86311 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCDHA11-ANKHD1 PCDHA11 chr5 140871494 + ANKHD1 chr5 140513363 + Exonic hg38 BRCA TCGA-D8-A13Z-01A 4 12 In-Frame Intra-chr q31.3 q31.3 Seq+ 86312 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTHFD1L-THEMIS MTHFD1L chr6 151034600 + THEMIS chr6 127719823 - Exonic hg38 BRCA TCGA-D8-A13Z-01A 4 9 5'UTR-5'UTR Intra-chr q25.1 Seq+ 86313 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM206-RCOR3 TMEM206 chr1 212410425 - RCOR3 chr1 211313424 + Exonic hg38 BRCA TCGA-D8-A13Z-01A 3 11 Out-of-frame Intra-chr q32.3 q32.2 Seq+ 86314 ChimerSeq TCGA FAWG TCGA_RNA-Seq RICTOR-RANBP3L RICTOR chr5 39074111 - RANBP3L chr5 36271311 - Exonic hg38 BRCA TCGA-D8-A13Z-01A 1 12 In-Frame Intra-chr p13.1 p13.2 Seq+ 86315 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRP9-PCNX1 SRP9 chr1 225783368 + PCNX1 chr14 71057509 + Exonic hg38 BRCA TCGA-D8-A13Z-01A 1 3 Out-of-frame Inter-chr q42.12 q24.2 86316 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF544-1 ZNF544 chr19 58230462 + 1 chr19 58314748 + Exonic hg38 BRCA TCGA-D8-A13Z-01A 1000 1000 5'UTR-CDS Intra-chr q13.43 Transcription factor 86317 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASPSCR1-COL5A3 ASPSCR1 chr17 81981300 + COL5A3 chr19 10004145 - Exonic hg38 BRCA TCGA-D8-A140-01A 7 18 5'UTR-CDS Inter-chr q25.3 p13.2 Seq+ 86318 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL19-IGHJ6 FBXL19 chr16 30948456 + IGHJ6 chr14 105863240 - Exonic hg38 BRCA TCGA-D8-A140-01A 9 0 Out-of-frame Inter-chr p11.2 Transcription factor Seq+ 86319 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCTP-MEI4 PCTP chr17 55773895 + MEI4 chr6 77690658 + Exonic hg38 BRCA TCGA-D8-A140-01A 3 15 CDS-5'UTR Inter-chr q22 q14.1 Seq+ 86320 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCSTN-CCT3 NCSTN chr1 160354290 + CCT3 chr1 156321025 - Exonic hg38 BRCA TCGA-D8-A140-01A 5 5 In-Frame Intra-chr q23.2 q22 Seq+ 86321 ChimerSeq TCGA FAWG TCGA_RNA-Seq OLFM2-CEP112 OLFM2 chr19 9936304 - CEP112 chr17 65689218 - Exonic hg38 BRCA TCGA-D8-A140-01A 3 12 In-Frame Inter-chr p13.2 q24.1 Seq+ 86322 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKAR1A-BCAS3 PRKAR1A chr17 68515576 + BCAS3 chr17 61368327 + Exonic hg38 BRCA TCGA-D8-A140-01A 2 13 Out-of-frame Intra-chr q24.2 Oncogene Tumor suppressor gene q23.2 Seq+ 86323 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM44-CD44 TRIM44 chr11 35735445 + CD44 chr11 35176575 + Exonic hg38 BRCA TCGA-D8-A140-01A 2 13 Out-of-frame Intra-chr p13 p13 Oncogene Tumor suppressor gene Seq+ 86324 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAG9-ARL17B SPAG9 chr17 51041501 - ARL17B chr17 46275418 - Exonic hg38 BRCA TCGA-D8-A140-01A 2 12 CDS-5'UTR Intra-chr q21.33 Seq+ 86325 ChimerSeq TCGA FAWG TCGA_RNA-Seq DEPDC5-SFI1 DEPDC5 chr22 31819225 + SFI1 chr22 31528690 + Exonic hg38 BRCA TCGA-D8-A140-01A 1 10 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 86326 ChimerSeq TCGA FAWG TCGA_RNA-Seq DEPDC5-DRG1 DEPDC5 chr22 31819225 + DRG1 chr22 31528690 + Exonic hg38 BRCA TCGA-D8-A140-01A 1 9 CDS-3'UTR Intra-chr q12.2 q12.2 Tumor suppressor gene 86327 ChimerSeq TCGA FAWG TCGA_RNA-Seq AXIN1-ITCH AXIN1 chr16 346148 - ITCH chr20 34369394 + Exonic hg38 BRCA TCGA-D8-A140-01A 2 4 CDS-5'UTR Inter-chr p13.3 Oncogene Tumor suppressor gene q11.22 Seq+ 86328 ChimerSeq TCGA FAWG TCGA_RNA-Seq DUSP7-PBRM1 DUSP7 chr3 52053940 - PBRM1 chr3 52554879 - Exonic hg38 BRCA TCGA-D8-A140-01A 1 8 In-Frame Intra-chr p21.2 p21.1 Oncogene Tumor suppressor gene Seq+ 86329 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCHO2-TNPO1 FCHO2 chr5 73041315 + TNPO1 chr5 72882467 + Exonic hg38 BRCA TCGA-D8-A140-01A 1 8 Out-of-frame Intra-chr q13.2 q13.2 86330 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLTSCR1L-HIST1H2AC GLTSCR1L chr6 42853738 + HIST1H2AC chr6 26138054 + Exonic hg38 BRCA TCGA-D8-A140-01A 1 4 Out-of-frame Intra-chr p22.2 86331 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF738-MAU2 ZNF738 chr19 21361858 + MAU2 chr19 19338845 + Exonic hg38 BRCA TCGA-D8-A140-01A 1 3 In-Frame Intra-chr p12 p13.11 86332 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP8-SLC27A2 USP8 chr15 50439177 + SLC27A2 chr15 50197500 + Exonic hg38 BRCA TCGA-D8-A140-01A 1 2 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 86333 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSMCE4A-ATE1 NSMCE4A chr10 121965286 - ATE1 chr10 121743858 - Exonic hg38 BRCA TCGA-D8-A142-01A 478 1707 Out-of-frame Intra-chr q26.13 q26.13 Seq+ 86334 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2AK2-RMDN2 EIF2AK2 chr2 37135484 - RMDN2 chr2 37989541 + Exonic hg38 BRCA TCGA-D8-A142-01A 8 41 In-Frame Intra-chr p22.2 p22.2 Seq+ 86335 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRP36-ADGRF1 RRP36 chr6 43027477 + ADGRF1 chr6 47014844 - Exonic hg38 BRCA TCGA-D8-A142-01A 1 15 In-Frame Intra-chr p21.1 p12.3 86336 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKR1E2-WAC AKR1E2 chr10 4842504 + WAC chr10 28583399 + Exonic hg38 BRCA TCGA-D8-A142-01A 2 6 Out-of-frame Intra-chr p15.1 p12.1 Seq+ 86337 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTPAP-CUBN MTPAP chr10 30322391 - CUBN chr10 16825082 - Exonic hg38 BRCA TCGA-D8-A142-01A 2 6 CDS-3'UTR Intra-chr p11.23 p13 Seq+ 86338 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS19-OT1 RPS19 chr19 41861212 + OT1 chr21 17763861 - Exonic hg38 BRCA TCGA-D8-A147-01A 16 85 Out-of-frame Inter-chr q13.2 86339 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHBP1-BCL11A EHBP1 chr2 62874532 + BCL11A chr2 60452666 - Exonic hg38 BRCA TCGA-D8-A147-01A 22 47 In-Frame Intra-chr p15 p16.1 Oncogene Transcription factor Seq+ 86340 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMBS-EHBP1 HMBS chr11 119092811 + EHBP1 chr2 62826087 + Exonic hg38 BRCA TCGA-D8-A147-01A 9 45 In-Frame Inter-chr p15 Seq+ 86341 ChimerSeq TCGA FAWG TCGA_RNA-Seq VASP-CYP2S1 VASP chr19 45507776 + CYP2S1 chr19 41205958 + Exonic hg38 BRCA TCGA-D8-A147-01A 9 34 Out-of-frame Intra-chr q13.32 q13.2 Seq+ 86342 ChimerSeq TCGA FAWG TCGA_RNA-Seq FADS2-EIF3F FADS2 chr11 61816426 + EIF3F chr11 7992887 + Exonic hg38 BRCA TCGA-D8-A147-01A 6 23 Out-of-frame Intra-chr q12.2 Tumor suppressor gene 86343 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D20-C20orf96 TBC1D20 chr20 462336 - C20orf96 chr20 284081 - Exonic hg38 BRCA TCGA-D8-A147-01A 5 20 In-Frame Intra-chr p13 p13 Seq+ 86344 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF292-B3GAT2 ZNF292 chr6 87155759 + B3GAT2 chr6 70894272 - Exonic hg38 BRCA TCGA-D8-A147-01A 5 19 In-Frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q13 Seq+ 86345 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOBP-ABCA9 SOBP chr6 107533610 + ABCA9 chr17 69012083 - Exonic hg38 BRCA TCGA-D8-A147-01A 2 10 In-Frame Inter-chr q21 q24.2 Seq+ 86346 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPAT3-MRPS18C GPAT3 chr4 83544602 + MRPS18C chr4 83456909 + Exonic hg38 BRCA TCGA-D8-A147-01A 1 7 In-Frame Intra-chr q21.23 q21.23 86347 ChimerSeq TCGA FAWG TCGA_RNA-Seq GUK1-TMEM216 GUK1 chr1 228146938 + TMEM216 chr11 61393231 + Exonic hg38 BRCA TCGA-D8-A147-01A 2 3 Out-of-frame Inter-chr q42.13 q12.2 Seq+ 86348 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRAMD1C-CCDC80 GRAMD1C chr3 113838936 + CCDC80 chr3 112643457 - Exonic hg38 BRCA TCGA-D8-A147-01A 2 2 CDS-5'UTR Intra-chr q13.31 q13.2 86349 ChimerSeq TCGA FAWG TCGA_RNA-Seq DUSP16-GPRC5D DUSP16 chr12 12500519 - GPRC5D chr12 12940849 - Exonic hg38 BRCA TCGA-D8-A147-01A 1 3 5'UTR-CDS Intra-chr p13.1 86350 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLGAP1-RAB31 DLGAP1 chr18 3814059 - RAB31 chr18 9792154 + Exonic hg38 BRCA TCGA-D8-A147-01A 1 2 In-Frame Intra-chr p11.31 p11.22 Seq+ 86351 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC37-TYK2 CDC37 chr19 10403378 - TYK2 chr19 10354234 - Exonic hg38 BRCA TCGA-D8-A147-01A 1000 1000 In-Frame Intra-chr p13.2 p13.2 TK:JakA 86352 ChimerSeq TCGA FAWG TCGA_RNA-Seq POGK-SPAG17 POGK chr1 166841088 + SPAG17 chr1 118151369 - Exonic hg38 BRCA TCGA-D8-A1J8-01A 1 2 In-Frame Intra-chr q24.1 Transcription factor p12 86353 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC61B-SIT1 SEC61B chr9 99222643 + SIT1 chr9 35650947 - Exonic hg38 BRCA TCGA-D8-A1J9-01A 32 189 CDS-5'UTR Intra-chr q22.33 p13.3 Seq+ 86354 ChimerSeq TCGA FAWG TCGA_RNA-Seq TADA2A-MYO1D TADA2A chr17 37442652 + MYO1D chr17 32494915 - Exonic hg38 BRCA TCGA-D8-A1J9-01A 4 30 3'UTR-CDS Intra-chr q12 q11.2 Seq+ 86355 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO19-CNP MYO19 chr17 36532527 - CNP chr17 41976593 + Exonic hg38 BRCA TCGA-D8-A1J9-01A 6 10 5'UTR-3'UTR Intra-chr q12 q21.2 Seq+ 86356 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABL1-ADAMTSL2 ABL1 chr9 130714455 + ADAMTSL2 chr9 133536563 + Exonic hg38 BRCA TCGA-D8-A1J9-01A 2 24 CDS-5'UTR Intra-chr q34.12 TK:Abl Oncogene q34.2 Seq+ 86357 ChimerSeq TCGA FAWG TCGA_RNA-Seq C9orf3-UBAP2 C9orf3 chr9 94792918 + UBAP2 chr9 33960878 - Exonic hg38 BRCA TCGA-D8-A1J9-01A 2 5 Out-of-frame Intra-chr q22.32 p13.3 Seq+ 86358 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNC-GABBR2 TNC chr9 115057153 - GABBR2 chr9 98578072 - Exonic hg38 BRCA TCGA-D8-A1J9-01A 2 4 Out-of-frame Intra-chr q33.1 q22.33 Seq+ 86359 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABL1-NUP214 ABL1 chr9 130873037 + NUP214 chr9 131139281 + Exonic hg38 BRCA TCGA-D8-A1J9-01A 1 4 Out-of-frame Intra-chr q34.12 TK:Abl Oncogene q34.13 Oncogene Pub Seq+ 86360 ChimerSeq TCGA FAWG TCGA_RNA-Seq INPP4B-ELF2 INPP4B chr4 142462663 - ELF2 chr4 139028349 - Exonic hg38 BRCA TCGA-D8-A1JA-01A 13 32 5'UTR-3'UTR Intra-chr q31.21 Tumor suppressor gene q31.1 Transcription factor 86361 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLIN2-CA10 PLIN2 chr9 19123565 - CA10 chr17 51747818 - Exonic hg38 BRCA TCGA-D8-A1JA-01A 10 38 5'UTR-CDS Inter-chr p22.1 q22 Seq+ 86362 ChimerSeq TCGA FAWG TCGA_RNA-Seq LLGL2-CA10 LLGL2 chr17 75525825 + CA10 chr17 51931132 - Exonic hg38 BRCA TCGA-D8-A1JA-01A 10 34 5'UTR-CDS Intra-chr q25.1 q22 Seq+ 86363 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL9-CYP4Z1 OSBPL9 chr1 51750195 + CYP4Z1 chr1 47067575 + Exonic hg38 BRCA TCGA-D8-A1JA-01A 5 15 Out-of-frame Intra-chr p32.3 p33 Seq+ 86364 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANXA3-BMP2K ANXA3 chr4 78554488 + BMP2K chr4 78910610 + Exonic hg38 BRCA TCGA-D8-A1JA-01A 1 29 Out-of-frame Intra-chr q21.21 q21.21 86365 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRAS1-CCSER1 FRAS1 chr4 78066016 + CCSER1 chr4 91598572 + Exonic hg38 BRCA TCGA-D8-A1JA-01A 5 5 In-Frame Intra-chr q21.21 q22.1 Seq+ 86366 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT7-SPOP KAT7 chr17 49798558 + SPOP chr17 49622876 - Exonic hg38 BRCA TCGA-D8-A1JA-01A 2 17 CDS-5'UTR Intra-chr q21.33 Transcription factor q21.33 Oncogene Tumor suppressor gene Seq+ 86367 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOXB6-SKAP1 HOXB6 chr17 48603715 - SKAP1 chr17 48137337 - Exonic hg38 BRCA TCGA-D8-A1JA-01A 2 10 5'UTR-CDS Intra-chr q21.32 Transcription factor q21.32 Seq+ 86368 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOXB3-SKAP1 HOXB3 chr17 48604480 - SKAP1 chr17 48137337 - Exonic hg38 BRCA TCGA-D8-A1JA-01A 2 9 5'UTR-CDS Intra-chr q21.32 Transcription factor q21.32 86369 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM83G-TTC19 FAM83G chr17 18988247 - TTC19 chr17 16025017 + Exonic hg38 BRCA TCGA-D8-A1JA-01A 1 3 Out-of-frame Intra-chr p11.2 p12 Seq+ 86370 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC24-C2CD3 ZDHHC24 chr11 66543704 - C2CD3 chr11 74057544 - Exonic hg38 BRCA TCGA-D8-A1JC-01A 7 46 In-Frame Intra-chr q13.2 q13.4 Seq+ 86371 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADK-KAT6B ADK chr10 74314745 + KAT6B chr10 74959970 + Exonic hg38 BRCA TCGA-D8-A1JC-01A 7 41 CDS-3'UTR Intra-chr q22.2 Oncogene Seq+ 86372 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABL1-NUP214 ABL1 chr9 130714455 + NUP214 chr9 131132596 + Exonic hg38 BRCA TCGA-D8-A1JC-01A 10 12 Out-of-frame Intra-chr q34.12 TK:Abl Oncogene q34.13 Oncogene Pub Seq+ 86373 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERLIN2-FGFR1 ERLIN2 chr8 37749852 + FGFR1 chr8 38457534 - Exonic hg38 BRCA TCGA-D8-A1JC-01A 3 16 In-Frame Intra-chr p11.23 p11.23 TK:FGFR Oncogene Seq+ 86374 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOR1-FBXO3 NCOR1 chr17 16057514 - FBXO3 chr11 33770830 - Exonic hg38 BRCA TCGA-D8-A1JD-01A 36 81 In-Frame Inter-chr p11.2 Oncogene p13 Seq+ 86375 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFKBIB-LGALS7B NFKBIB chr19 38900211 + LGALS7B chr19 38790689 + Exonic hg38 BRCA TCGA-D8-A1JF-01A 7 16 3'UTR-5'UTR Intra-chr Seq+ 86376 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF11-ETV3 ARHGEF11 chr1 157044299 - ETV3 chr1 157125979 - Exonic hg38 BRCA TCGA-D8-A1JF-01A 1 10 Out-of-frame Intra-chr q23.1 q23.1 Transcription factor Seq+ 86377 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC2-EFCAB3 TANC2 chr17 63009626 + EFCAB3 chr17 62344032 + Exonic hg38 BRCA TCGA-D8-A1JG-01B 8 11 CDS-5'UTR Intra-chr q23.2 q23.2 Seq+ 86378 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNQ1-TSPAN32 KCNQ1 chr11 2528018 + TSPAN32 chr11 2302844 + Exonic hg38 BRCA TCGA-D8-A1JG-01B 1 26 3'UTR-CDS Intra-chr p15.5 p15.5 Tumor suppressor gene Seq+ 86379 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAP1GDS1-CDK12 RAP1GDS1 chr4 98293515 + CDK12 chr17 39564760 + Exonic hg38 BRCA TCGA-D8-A1JG-01B 1 5 CDS-3'UTR Inter-chr q23 q12 Oncogene 86380 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT7-SAP30 GALNT7 chr4 173168961 + SAP30 chr4 173373390 + Exonic hg38 BRCA TCGA-D8-A1JG-01B 1000 1000 In-Frame Intra-chr q34.1 q34.1 Seq+ 86381 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRP1-VSTM4 NRP1 chr10 33330708 - VSTM4 chr10 49019775 - Exonic hg38 BRCA TCGA-D8-A1JH-01A 3 38 Out-of-frame Intra-chr p11.22 q11.23 Seq+ 86382 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTAN1-CADPS2 SPTAN1 chr9 128552696 + CADPS2 chr7 122737068 - Exonic hg38 BRCA TCGA-D8-A1JI-01A 37 76 5'UTR-5'UTR Inter-chr q34.11 q31.32 Seq+ 86383 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND1A-CADPS2 DENND1A chr9 123652013 - CADPS2 chr7 122737068 - Exonic hg38 BRCA TCGA-D8-A1JI-01A 11 32 In-Frame Inter-chr q33.3 q31.32 Seq+ 86384 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTGES2-DENND1A PTGES2 chr9 128127439 - DENND1A chr9 123583270 - Exonic hg38 BRCA TCGA-D8-A1JI-01A 12 25 In-Frame Intra-chr q34.11 q33.3 Seq+ 86385 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0368-PACS1 KIAA0368 chr9 111420017 - PACS1 chr11 66232960 + Exonic hg38 BRCA TCGA-D8-A1JI-01A 6 13 Out-of-frame Inter-chr q31.3 q13.1 Seq+ 86386 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADK-SPTAN1 ADK chr10 74224591 + SPTAN1 chr9 128566738 + Exonic hg38 BRCA TCGA-D8-A1JI-01A 1 6 5'UTR-5'UTR Inter-chr q22.2 q34.11 Seq+ 86387 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBX3-PPFIA1 PBX3 chr9 125748623 + PPFIA1 chr11 70372215 + Exonic hg38 BRCA TCGA-D8-A1JI-01A 1 4 Out-of-frame Inter-chr q33.3 Transcription factor q13.3 86388 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC2-ACE TANC2 chr17 63379826 + ACE chr17 63486557 + Exonic hg38 BRCA TCGA-D8-A1JJ-01A 32 105 In-Frame Intra-chr q23.2 q23.3 Seq+ 86389 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRHL2-LRRC63 GRHL2 chr8 101619697 + LRRC63 chr13 46228665 + Exonic hg38 BRCA TCGA-D8-A1JJ-01A 2 14 Out-of-frame Inter-chr q22.3 Transcription factor q14.13 86390 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRHL2-TPD52 GRHL2 chr8 101552782 + TPD52 chr8 80042668 - Exonic hg38 BRCA TCGA-D8-A1JJ-01A 3 9 In-Frame Intra-chr q22.3 Transcription factor q21.13 Seq+ 86391 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF146-C6orf58 RNF146 chr6 127267095 + C6orf58 chr6 127590087 + Exonic hg38 BRCA TCGA-D8-A1JJ-01A 1 2 5'UTR-CDS Intra-chr q22.33 q22.33 86392 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBAC2-CLYBL UBAC2 chr13 99238554 + CLYBL chr13 99891318 + Exonic hg38 BRCA TCGA-D8-A1JK-01A 71 305 In-Frame Intra-chr q32.3 q32.3 Seq+ 86393 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF292-CGA ZNF292 chr6 87155759 + CGA chr6 87088207 - Exonic hg38 BRCA TCGA-D8-A1JK-01A 59 158 5'UTR-5'UTR Intra-chr q14.3 Tumor suppressor gene Transcription factor q14.3 Seq+ 86394 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACUL1-EIF3A CACUL1 chr10 118729295 - EIF3A chr10 119059397 - Exonic hg38 BRCA TCGA-D8-A1JK-01A 27 49 In-Frame Intra-chr q26.11 q26.11 Seq+ 86395 ChimerSeq TCGA FAWG TCGA_RNA-Seq HERC1-DAPK2 HERC1 chr15 63833827 - DAPK2 chr15 63912197 - Exonic hg38 BRCA TCGA-D8-A1JK-01A 8 13 5'UTR-CDS Intra-chr q22.31 q22.31 CAMK:DAPK Tumor suppressor gene Seq+ 86396 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLC1-MARK3 KLC1 chr14 103670283 + MARK3 chr14 103448919 + Exonic hg38 BRCA TCGA-D8-A1JK-01A 6 16 In-Frame Intra-chr q32.33 q32.32 CAMK:CAMKL Seq+ 86397 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAM9-CLYBL ADAM9 chr8 38997160 + CLYBL chr13 99772824 + Exonic hg38 BRCA TCGA-D8-A1JK-01A 4 19 3'UTR-CDS Inter-chr q32.3 Seq+ 86398 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC2-EFCAB3 TANC2 chr17 63200957 + EFCAB3 chr17 62373814 + Exonic hg38 BRCA TCGA-D8-A1JK-01A 5 15 In-Frame Intra-chr q23.2 q23.2 Seq+ 86399 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2Q2-ODF3L1 UBE2Q2 chr15 75843846 + ODF3L1 chr15 75725108 + Exonic hg38 BRCA TCGA-D8-A1JK-01A 1 23 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 86400 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM2D2-MSI2 TM2D2 chr8 38995318 - MSI2 chr17 57401379 + Exonic hg38 BRCA TCGA-D8-A1JK-01A 4 9 In-Frame Inter-chr p11.22 q22 Seq+ 86401 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMK1D-PROSER2 CAMK1D chr10 12349910 + PROSER2 chr10 11851997 + Exonic hg38 BRCA TCGA-D8-A1JK-01A 1 8 CDS-5'UTR Intra-chr p13 p14 Seq+ 86402 ChimerSeq TCGA FAWG TCGA_RNA-Seq UHRF1BP1L-DEPDC4 UHRF1BP1L chr12 100142592 - DEPDC4 chr12 100256226 - Exonic hg38 BRCA TCGA-D8-A1JK-01A 1 4 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 86403 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF282-CUL1 ZNF282 chr7 149213814 + CUL1 chr7 148766561 + Exonic hg38 BRCA TCGA-D8-A1JK-01A 1 2 Out-of-frame Intra-chr q36.1 Transcription factor q36.1 Tumor suppressor gene Seq+ 86404 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACUL1-EIF6 CACUL1 chr10 118729295 - EIF6 chr10 119059397 - Exonic hg38 BRCA TCGA-D8-A1JK-01A 1000 1000 CDS-5'UTR Intra-chr q26.11 q11.22 86405 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPM1-RAB4A NPM1 chr5 171388006 + RAB4A chr1 229286486 + Exonic hg38 BRCA TCGA-D8-A1JL-01A 28 430 In-Frame Inter-chr q35.1 Oncogene Tumor suppressor gene q42.13 Seq+ 86406 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD7-CCDC58 CHD7 chr8 60830577 + CCDC58 chr3 122363027 - Exonic hg38 BRCA TCGA-D8-A1JL-01A 46 280 Out-of-frame Inter-chr q12.2 q21.1 Seq+ 86407 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSPA9-ARL15 HSPA9 chr5 138567455 - ARL15 chr5 53886713 - Exonic hg38 BRCA TCGA-D8-A1JL-01A 13 96 Out-of-frame Intra-chr q31.2 q11.2 Seq+ 86408 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM2-P2RY11 DNM2 chr19 10802358 + P2RY11 chr19 10113633 + Exonic hg38 BRCA TCGA-D8-A1JL-01A 10 63 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 86409 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP70-STAG1 CEP70 chr3 138570318 - STAG1 chr3 136568861 - Exonic hg38 BRCA TCGA-D8-A1JL-01A 6 29 In-Frame Intra-chr q22.3 q22.3 Seq+ 86410 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYB5RL-TTC39A CYB5RL chr1 54190738 - TTC39A chr1 51290625 - Exonic hg38 BRCA TCGA-D8-A1JL-01A 3 37 3'UTR-CDS Intra-chr p32.3 p32.3 Seq+ 86411 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIP2C-YY1 DIP2C chr10 689494 - YY1 chr14 100262304 + Exonic hg38 BRCA TCGA-D8-A1JL-01A 9 9 In-Frame Inter-chr p15.3 q32.2 Transcription factor Seq+ 86412 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD11-PITPNC1 PSMD11 chr17 32454619 + PITPNC1 chr17 67669508 + Exonic hg38 BRCA TCGA-D8-A1JL-01A 5 15 In-Frame Intra-chr q11.2 q24.2 Seq+ 86413 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0753-PHF23 KIAA0753 chr17 6640637 - PHF23 chr17 7237660 - Exonic hg38 BRCA TCGA-D8-A1JL-01A 5 7 5'UTR-CDS Intra-chr p13.1 p13.1 Seq+ 86414 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRHL2-NRBP2 GRHL2 chr8 101649499 + NRBP2 chr8 143840229 - Exonic hg38 BRCA TCGA-D8-A1JL-01A 3 5 In-Frame Intra-chr q22.3 Transcription factor q24.3 Other:NRBP Seq+ 86415 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOBTB3-ARSK RHOBTB3 chr5 95783963 + ARSK chr5 95582916 + Exonic hg38 BRCA TCGA-D8-A1JL-01A 1 11 Out-of-frame Intra-chr q15 q15 86416 ChimerSeq TCGA FAWG TCGA_RNA-Seq MND1-TRIM2 MND1 chr4 153344740 + TRIM2 chr4 153328530 + Exonic hg38 BRCA TCGA-D8-A1JL-01A 2 1 In-Frame Intra-chr q31.3 q31.3 Seq+ 86417 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD1-HOMER2 BTBD1 chr15 83066751 - HOMER2 chr15 82892841 - Exonic hg38 BRCA TCGA-D8-A1JL-01A 1 4 In-Frame Intra-chr q25.2 q25.2 Tumor suppressor gene 86418 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM265-MVP TMEM265 chr16 30741908 + MVP chr16 29840178 + Exonic hg38 BRCA TCGA-D8-A1JM-01A 85 1014 In-Frame Intra-chr p11.2 p11.2 86419 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBPMS-RILPL1 RBPMS chr8 30385158 + RILPL1 chr12 123485805 - Exonic hg38 BRCA TCGA-D8-A1JM-01A 10 55 In-Frame Inter-chr p12 q24.31 Seq+ 86420 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNC2H1-U95743.1 DYNC2H1 chr11 103312033 + U95743.1 chr16 13767366 - Exonic hg38 BRCA TCGA-D8-A1JM-01A 3 15 Out-of-frame Inter-chr q22.3 p13.12 86421 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS53-MYH2 VPS53 chr17 601795 - MYH2 chr17 10540697 - Exonic hg38 BRCA TCGA-D8-A1JM-01A 3 10 5'UTR-CDS Intra-chr Tumor suppressor gene p13.1 Seq+ 86422 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNA1I-TAB1 CACNA1I chr22 39662435 + TAB1 chr22 39426703 + Exonic hg38 BRCA TCGA-D8-A1JM-01A 3 8 In-Frame Intra-chr q13.1 q13.1 Seq+ 86423 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACLY-DNAJC7 ACLY chr17 41898631 - DNAJC7 chr17 41977323 - Exonic hg38 BRCA TCGA-D8-A1JM-01A 3 4 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 86424 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAS7-TTLL9 GAS7 chr17 10019777 - TTLL9 chr20 31909737 + Exonic hg38 BRCA TCGA-D8-A1JM-01A 1 4 Out-of-frame Inter-chr p13.1 q11.21 86425 ChimerSeq TCGA FAWG TCGA_RNA-Seq TATDN1-OC90 TATDN1 chr8 124515746 - OC90 chr8 132045883 - Exonic hg38 BRCA TCGA-D8-A1JP-01A 4 9 Out-of-frame Intra-chr q24.13 q24.22 Seq+ 86426 ChimerSeq TCGA FAWG TCGA_RNA-Seq WASHC4-AUTS2 WASHC4 chr12 105107861 + AUTS2 chr7 70118132 + Exonic hg38 BRCA TCGA-D8-A1JP-01A 2 4 Out-of-frame Inter-chr q23.3 q11.22 86427 ChimerSeq TCGA FAWG TCGA_RNA-Seq FANCC-SLC28A3 FANCC chr9 95317526 - SLC28A3 chr9 84288178 - Exonic hg38 BRCA TCGA-D8-A1JP-01A 1 5 5'UTR-CDS Intra-chr q22.32 Oncogene q21.33 86428 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF1-MED28 EIF1 chr17 41689941 + MED28 chr4 17619901 + Exonic hg38 BRCA TCGA-D8-A1X5-01A 188 413 In-Frame Inter-chr q21.2 p15.32 Seq+ 86429 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-EMSY UVRAG chr11 76065788 + EMSY chr11 76528268 + Exonic hg38 BRCA TCGA-D8-A1X5-01A 4 50 In-Frame Intra-chr q13.5 Tumor suppressor gene q13.5 Seq+ 86430 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP35-TSHZ2 USP35 chr11 78189157 + TSHZ2 chr20 53487144 + Exonic hg38 BRCA TCGA-D8-A1X5-01A 5 21 5'UTR-3'UTR Inter-chr q14.1 q13.2 Transcription factor Seq+ 86431 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRA3-ERBB2 ADGRA3 chr4 22473772 - ERBB2 chr17 39693261 + Exonic hg38 BRCA TCGA-D8-A1X5-01A 5 18 CDS-5'UTR Inter-chr p15.2 q12 Oncogene 86432 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM102B-TMEM56 FAM102B chr1 108560565 + TMEM56 chr1 95143891 + Exonic hg38 BRCA TCGA-D8-A1X5-01A 5 14 Out-of-frame Intra-chr p13.3 p21.3 Seq+ 86433 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIMCH1-APBB2 LIMCH1 chr4 41524478 + APBB2 chr4 41100750 - Exonic hg38 BRCA TCGA-D8-A1X5-01A 6 9 5'UTR-5'UTR Intra-chr p13 p13 Seq+ 86434 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC30A9-NSUN7 SLC30A9 chr4 41990760 + NSUN7 chr4 40790602 + Exonic hg38 BRCA TCGA-D8-A1X5-01A 2 20 In-Frame Intra-chr p13 p14 Seq+ 86435 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM56-FNBP1L TMEM56 chr1 95173889 + FNBP1L chr1 93499468 + Exonic hg38 BRCA TCGA-D8-A1X5-01A 3 14 Out-of-frame Intra-chr p21.3 p22.1 Seq+ 86436 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNBP1L-CHFR FNBP1L chr1 93448305 + CHFR chr12 132945797 - Exonic hg38 BRCA TCGA-D8-A1X5-01A 4 5 CDS-5'UTR Inter-chr p22.1 q24.33 Tumor suppressor gene 86437 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNBP1L-ZNF605 FNBP1L chr1 93448305 + ZNF605 chr12 132945797 - Exonic hg38 BRCA TCGA-D8-A1X5-01A 4 5 CDS-5'UTR Inter-chr p22.1 q24.33 Transcription factor 86438 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP3CA-COL25A1 PPP3CA chr4 101346739 - COL25A1 chr4 108974559 - Exonic hg38 BRCA TCGA-D8-A1X5-01A 1 9 Out-of-frame Intra-chr q24 q25 Seq+ 86439 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A14-PRKDC SLC39A14 chr8 22367408 + PRKDC chr8 47849503 - Exonic hg38 BRCA TCGA-D8-A1X5-01A 1 5 5'UTR-CDS Intra-chr p21.3 q11.21 Oncogene Seq+ 86440 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP17-TACC1 ARHGAP17 chr16 24941987 - TACC1 chr8 38742351 + Exonic hg38 BRCA TCGA-D8-A1X6-01A 1 7 CDS-5'UTR Inter-chr p12.1 p11.22 86441 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARRB1-11 ARRB1 chr11 75281075 - 11 chr11 71582157 - Exonic hg38 BRCA TCGA-D8-A1X8-01A 3 4 Out-of-frame Intra-chr q13.4 86442 ChimerSeq TCGA FAWG TCGA_RNA-Seq AIFM1-ARL3 AIFM1 chrX 130159970 - ARL3 chr10 102705379 - Exonic hg38 BRCA TCGA-D8-A1X9-01A 5 13 Out-of-frame Inter-chr q26.1 q24.32 Seq+ 86443 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNTTIP2-GCLM DNTTIP2 chr1 93876268 - GCLM chr1 93901669 - Exonic hg38 BRCA TCGA-D8-A1X9-01A 5 9 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 86444 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCMBP-ZNF23 MCMBP chr10 119843248 - ZNF23 chr16 71453350 - Exonic hg38 BRCA TCGA-D8-A1X9-01A 1 17 In-Frame Inter-chr q26.11 q22.2 Transcription factor Seq+ 86445 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUSD1-UGCG SUSD1 chr9 112078538 - UGCG chr9 111914605 + Exonic hg38 BRCA TCGA-D8-A1XA-01A 14 83 Out-of-frame Intra-chr q32 q31.3 Seq+ 86446 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNIK-MTHFD1L TNIK chr3 171369620 - MTHFD1L chr6 151092467 + Exonic hg38 BRCA TCGA-D8-A1XB-01A 1 4 In-Frame Inter-chr q26.31 STE:STE20 q25.1 Seq+ 86447 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEF1A2-DKKL1 EEF1A2 chr20 63490479 - DKKL1 chr19 49374717 + Exonic hg38 BRCA TCGA-D8-A1XD-01A 114 399 In-Frame Inter-chr q13.33 q13.33 Seq+ 86448 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALY-MAP1LC3A RALY chr20 33994131 + MAP1LC3A chr20 34559208 + Exonic hg38 BRCA TCGA-D8-A1XD-01A 47 275 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 86449 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM189-KCNC3 TMEM189 chr20 50153517 - KCNC3 chr19 50324082 - Exonic hg38 BRCA TCGA-D8-A1XD-01A 11 43 Out-of-frame Inter-chr q13.13 q13.33 Seq+ 86450 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD6-ZNF235 CHD6 chr20 41451826 - ZNF235 chr19 44234869 - Exonic hg38 BRCA TCGA-D8-A1XD-01A 3 28 CDS-3'UTR Inter-chr q12 q13.31 Transcription factor 86451 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFX1-ZNF616 NFX1 chr9 33290597 + ZNF616 chr19 52130588 - Exonic hg38 BRCA TCGA-D8-A1XD-01A 1 33 CDS-5'UTR Inter-chr p13.3 Transcription factor q13.41 Transcription factor Seq+ 86452 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPATA13-IKBKB SPATA13 chr13 24160932 + IKBKB chr8 42305187 + Exonic hg38 BRCA TCGA-D8-A1XD-01A 2 23 5'UTR-5'UTR Inter-chr q12.12 p11.21 Oncogene Seq+ 86453 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF600-NFX1 ZNF600 chr19 52778826 - NFX1 chr9 33301263 + Exonic hg38 BRCA TCGA-D8-A1XD-01A 3 10 Out-of-frame Inter-chr q13.41 Transcription factor p13.3 Transcription factor Seq+ 86454 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADNP-ZNF841 ADNP chr20 50928651 - ZNF841 chr19 52067610 - Exonic hg38 BRCA TCGA-D8-A1XD-01A 2 9 5'UTR-5'UTR Inter-chr q13.13 Transcription factor q13.41 Transcription factor Seq+ 86455 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERCC6L2-TRPM6 ERCC6L2 chr9 95897971 + TRPM6 chr9 74858748 - Exonic hg38 BRCA TCGA-D8-A1XD-01A 1 8 In-Frame Intra-chr q22.32 q21.13 86456 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARD6B-PRPF6 PARD6B chr20 50731852 + PRPF6 chr20 63999045 + Exonic hg38 BRCA TCGA-D8-A1XD-01A 1 5 In-Frame Intra-chr q13.13 q13.33 86457 ChimerSeq TCGA FAWG TCGA_RNA-Seq NTRK2-RASEF NTRK2 chr9 84955517 + RASEF chr9 82982782 - Exonic hg38 BRCA TCGA-D8-A1XD-01A 1 2 Out-of-frame Intra-chr q21.33 Oncogene q21.32 Seq+ 86458 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF121-SPCS2P4 RNF121 chr11 71929124 + SPCS2P4 chr1 28096308 - Exonic hg38 BRCA TCGA-D8-A1XF-01A 39 19 Out-of-frame Inter-chr q13.4 p35.3 86459 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA2-SHANK2 PLEKHA2 chr8 38918070 + SHANK2 chr11 70502931 - Exonic hg38 BRCA TCGA-D8-A1XF-01A 3 10 In-Frame Inter-chr p11.22 q13.4 Seq+ 86460 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUL4A-TFDP1 CUL4A chr13 113244514 + TFDP1 chr13 113610996 + Exonic hg38 BRCA TCGA-D8-A1XF-01A 1 17 Out-of-frame Intra-chr q34 q34 Transcription factor Seq+ 86461 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFNA1-CPB1 EFNA1 chr1 155133774 + CPB1 chr3 148834509 + Exonic hg38 BRCA TCGA-D8-A1XG-01A 1000 1000 Out-of-frame Inter-chr q22 q24 86462 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD3-C17orf98 STARD3 chr17 39653750 + C17orf98 chr17 38835346 - Exonic hg38 BRCA TCGA-D8-A1XJ-01A 50 179 CDS-5'UTR Intra-chr q12 q12 Seq+ 86463 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0319L-PHC2 KIAA0319L chr1 35442246 - PHC2 chr1 33325019 - Exonic hg38 BRCA TCGA-D8-A1XJ-01A 37 111 Out-of-frame Intra-chr p34.3 p35.1 Seq+ 86464 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-RPL23 FBXL20 chr17 39401361 - RPL23 chr17 38853105 - Exonic hg38 BRCA TCGA-D8-A1XJ-01A 33 81 Out-of-frame Intra-chr q12 q12 Seq+ 86465 ChimerSeq TCGA FAWG TCGA_RNA-Seq TADA2A-STARD3 TADA2A chr17 37411390 + STARD3 chr17 39653481 + Exonic hg38 BRCA TCGA-D8-A1XJ-01A 20 84 3'UTR-5'UTR Intra-chr q12 q12 86466 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNAS-NECTIN2 GNAS chr20 58895684 + NECTIN2 chr19 44882211 + Exonic hg38 BRCA TCGA-D8-A1XJ-01A 23 51 Out-of-frame Inter-chr q13.32 Oncogene q13.32 86467 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED1-PIP4K2B MED1 chr17 39451038 - PIP4K2B chr17 38786920 - Exonic hg38 BRCA TCGA-D8-A1XJ-01A 2 95 CDS-5'UTR Intra-chr q12 Tumor suppressor gene q12 Seq+ 86468 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-MED1 ERBB2 chr17 39717480 + MED1 chr17 39415339 - Exonic hg38 BRCA TCGA-D8-A1XJ-01A 14 17 Out-of-frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 86469 ChimerSeq TCGA FAWG TCGA_RNA-Seq THRA-TADA2A THRA chr17 40063092 + TADA2A chr17 37411269 + Exonic hg38 BRCA TCGA-D8-A1XJ-01A 12 21 5'UTR-3'UTR Intra-chr q21.1 Tumor suppressor gene Transcription factor q12 Seq+ 86470 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACSS1-PHACTR3 ACSS1 chr20 25057769 - PHACTR3 chr20 59743107 + Exonic hg38 BRCA TCGA-D8-A1XJ-01A 8 21 In-Frame Intra-chr p11.21 q13.32 Seq+ 86471 ChimerSeq TCGA FAWG TCGA_RNA-Seq C17orf98-CDK12 C17orf98 chr17 38835213 - CDK12 chr17 39564760 + Exonic hg38 BRCA TCGA-D8-A1XJ-01A 4 16 Out-of-frame Intra-chr q12 q12 Oncogene 86472 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIP4K2B-FBXL20 PIP4K2B chr17 38799266 - FBXL20 chr17 39343241 - Exonic hg38 BRCA TCGA-D8-A1XJ-01A 3 19 5'UTR-CDS Intra-chr q12 q12 Seq+ 86473 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK24-DOCK9 STK24 chr13 98519243 - DOCK9 chr13 98800478 - Exonic hg38 BRCA TCGA-D8-A1XJ-01A 2 17 Out-of-frame Intra-chr q32.2 q32.3 Seq+ 86474 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACACA-MED24 ACACA chr17 37406262 - MED24 chr17 40053635 - Exonic hg38 BRCA TCGA-D8-A1XJ-01A 4 8 5'UTR-5'UTR Intra-chr q21.1 Seq+ 86475 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNB1-ERBB2 CACNB1 chr17 39177984 - ERBB2 chr17 39730023 + Exonic hg38 BRCA TCGA-D8-A1XJ-01A 1 19 CDS-3'UTR Intra-chr q12 q12 Oncogene 86476 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-ARL5C FBXL20 chr17 39274970 - ARL5C chr17 39166617 - Exonic hg38 BRCA TCGA-D8-A1XJ-01A 1 4 CDS-5'UTR Intra-chr q12 q12 86477 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN14-SFTPD TSPAN14 chr10 80468687 + SFTPD chr10 79942879 - Exonic hg38 BRCA TCGA-D8-A1XK-01A 12 55 5'UTR-CDS Intra-chr q23.1 q22.3 Seq+ 86478 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBASH3B-FOLH1B UBASH3B chr11 122656210 + FOLH1B chr11 89680609 + Exonic hg38 BRCA TCGA-D8-A1XK-01A 5 23 In-Frame Intra-chr q24.1 q14.3 Seq+ 86479 ChimerSeq TCGA FAWG TCGA_RNA-Seq GCOM1-ADGRL1 GCOM1 chr15 57604355 + ADGRL1 chr19 14152437 - Exonic hg38 BRCA TCGA-D8-A1XK-01A 5 16 Out-of-frame Inter-chr q21.3 p13.12 86480 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYZAP-ADGRL1 MYZAP chr15 57604355 + ADGRL1 chr19 14152437 - Exonic hg38 BRCA TCGA-D8-A1XK-01A 5 16 Out-of-frame Inter-chr q21.3 p13.12 86481 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELL2-TTC37 ELL2 chr5 95919424 - TTC37 chr5 95498591 - Exonic hg38 BRCA TCGA-D8-A1XK-01A 3 22 In-Frame Intra-chr q15 q15 Seq+ 86482 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB48-TAS1R1 ZBTB48 chr1 6589050 + TAS1R1 chr1 6576950 + Exonic hg38 BRCA TCGA-D8-A1XK-01A 3 21 Out-of-frame Intra-chr p36.31 Tumor suppressor gene Transcription factor p36.31 Seq+ 86483 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM2-IST1 PUM2 chr2 20350597 - IST1 chr16 71915626 + Exonic hg38 BRCA TCGA-D8-A1XK-01A 2 13 5'UTR-5'UTR Inter-chr p24.1 q22.2 Seq+ 86484 ChimerSeq TCGA FAWG TCGA_RNA-Seq UIMC1-PMM2 UIMC1 chr5 176943335 - PMM2 chr16 8847724 + Exonic hg38 BRCA TCGA-D8-A1XK-01A 1 14 Out-of-frame Inter-chr q35.2 Tumor suppressor gene p13.2 Seq+ 86485 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP32-CRYBA4 USP32 chr17 60294683 - CRYBA4 chr22 26622585 + Exonic hg38 BRCA TCGA-D8-A1XL-01A 11 37 CDS-5'UTR Inter-chr q23.2 q12.1 Seq+ 86486 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF77-LPCAT2 ZNF77 chr19 2944838 - LPCAT2 chr16 55525508 + Exonic hg38 BRCA TCGA-D8-A1XL-01A 2 13 In-Frame Inter-chr p13.3 Transcription factor q12.2 Seq+ 86487 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPCAT2-CACTIN LPCAT2 chr16 55537632 + CACTIN chr19 3620272 - Exonic hg38 BRCA TCGA-D8-A1XL-01A 2 7 In-Frame Inter-chr q12.2 p13.3 Seq+ 86488 ChimerSeq TCGA FAWG TCGA_RNA-Seq YWHAB-ARHGAP32 YWHAB chr20 44885886 + ARHGAP32 chr11 129093707 - Exonic hg38 BRCA TCGA-D8-A1XO-01A 4 19 5'UTR-CDS Inter-chr q13.12 q24.3 Seq+ 86489 ChimerSeq TCGA FAWG TCGA_RNA-Seq RGS12-THY1 RGS12 chr4 3343053 + THY1 chr11 119420929 - Exonic hg38 BRCA TCGA-D8-A1XO-01A 4 16 CDS-5'UTR Inter-chr p16.3 q23.3 Tumor suppressor gene Seq+ 86490 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCM5-TOM1 MCM5 chr22 35421460 + TOM1 chr22 35317877 + Exonic hg38 BRCA TCGA-D8-A1XQ-01A 6 40 In-Frame Intra-chr q12.3 q12.3 Seq+ 86491 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A9-RAD51B SLC39A9 chr14 69399465 + RAD51B chr14 68682937 + Exonic hg38 BRCA TCGA-D8-A1XQ-01A 6 19 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 86492 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGA1-PPEF1 HMGA1 chr6 34243518 + PPEF1 chrX 18730181 + Exonic hg38 BRCA TCGA-D8-A1XQ-01A 1 29 Out-of-frame Inter-chr p21.31 Transcription factor p22.13 86493 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP9A-SALL4 ATP9A chr20 51768302 - SALL4 chr20 51784684 - Exonic hg38 BRCA TCGA-D8-A1XQ-01A 5 1 Out-of-frame Intra-chr q13.2 q13.2 Tumor suppressor gene Transcription factor 86494 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS28-POGZ MRPS28 chr8 80002999 - POGZ chr1 151442205 - Exonic hg38 BRCA TCGA-D8-A1XQ-01A 2 13 CDS-5'UTR Inter-chr q21.13 q21.3 86495 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS9-TSEN34 RPS9 chr19 54201609 + TSEN34 chr19 54193175 + Exonic hg38 BRCA TCGA-D8-A1XQ-01A 2 12 3'UTR-3'UTR Intra-chr 86496 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRPEL2-AFAP1L1 GRPEL2 chr5 149345616 + AFAP1L1 chr5 149340007 + Exonic hg38 BRCA TCGA-D8-A1XQ-01A 2 11 Out-of-frame Intra-chr q32 q32 86497 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX30-SLC31A1 SNX30 chr9 112751157 + SLC31A1 chr9 113256114 + Exonic hg38 BRCA TCGA-D8-A1XQ-01A 2 7 CDS-5'UTR Intra-chr q32 q32 86498 ChimerSeq TCGA FAWG TCGA_RNA-Seq USF3-NAA50 USF3 chr3 113664313 - NAA50 chr3 113724095 - Exonic hg38 BRCA TCGA-D8-A1XQ-01A 1 4 Out-of-frame Intra-chr q13.2 Transcription factor q13.31 86499 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC12A8-BFSP2 SLC12A8 chr3 125211299 - BFSP2 chr3 133450303 + Exonic hg38 BRCA TCGA-D8-A1XR-01A 34 134 In-Frame Intra-chr q21.2 q22.1 Seq+ 86500 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-ALDH3B2 PPFIA1 chr11 70272436 + ALDH3B2 chr11 67667635 - Exonic hg38 BRCA TCGA-D8-A1XS-01A 4 21 5'UTR-5'UTR Intra-chr q13.3 q13.2 Seq+ 86501 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKDC-SPIDR PRKDC chr8 47794290 - SPIDR chr8 47595811 + Exonic hg38 BRCA TCGA-D8-A1XS-01A 1 1 In-Frame Intra-chr q11.21 Oncogene q11.21 86502 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND5A-SBF2 DENND5A chr11 9193494 - SBF2 chr11 9858396 - Exonic hg38 BRCA TCGA-D8-A1XT-01A 19 62 In-Frame Intra-chr p15.4 p15.4 Seq+ 86503 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC2A1-GRHL3 SLC2A1 chr1 42958634 - GRHL3 chr1 24331426 + Exonic hg38 BRCA TCGA-D8-A1XT-01A 6 13 Out-of-frame Intra-chr p34.2 p36.11 Transcription factor Seq+ 86504 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEBL-DNAJC1 NEBL chr10 20961672 - DNAJC1 chr10 21806099 - Exonic hg38 BRCA TCGA-D8-A1XU-01A 1 1 In-Frame Intra-chr p12.31 p12.31 Seq+ 86505 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPP-ADIPOQ LPP chr3 188225527 + ADIPOQ chr3 186853051 + Exonic hg38 BRCA TCGA-D8-A1XW-01A 17 145 5'UTR-5'UTR Intra-chr q27.3 Oncogene q27.3 Seq+ 86506 ChimerSeq TCGA FAWG TCGA_RNA-Seq PODXL-TYW1B PODXL chr7 131556260 - TYW1B chr7 72628997 - Exonic hg38 BRCA TCGA-D8-A1XW-01A 2 4 Out-of-frame Intra-chr q32.3 q11.23 Seq+ 86507 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARC2-HLX MARC2 chr1 220763050 + HLX chr1 220884195 + Exonic hg38 BRCA TCGA-D8-A1XW-01A 1 3 In-Frame Intra-chr q41 q41 Transcription factor 86508 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYT1-ACSS3 SYT1 chr12 79047362 + ACSS3 chr12 81199341 + Exonic hg38 BRCA TCGA-D8-A1XY-01A 6 6 5'UTR-CDS Intra-chr q21.2 q21.31 Seq+ 86509 ChimerSeq TCGA FAWG TCGA_RNA-Seq NBEA-ALG5 NBEA chr13 35117493 + ALG5 chr13 36972036 - Exonic hg38 BRCA TCGA-D8-A1XY-01A 5 7 In-Frame Intra-chr q13.3 q13.3 Seq+ 86510 ChimerSeq TCGA FAWG TCGA_RNA-Seq TATDN1-1568E2.1 TATDN1 chr8 124539025 - 1568E2.1 chr8 130599071 - Exonic hg38 BRCA TCGA-D8-A1XZ-01A 104 70 Out-of-frame Intra-chr q24.13 86511 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP35-COL22A1 ARHGAP35 chr19 46937408 + COL22A1 chr8 138780980 - Exonic hg38 BRCA TCGA-D8-A1XZ-01A 12 174 Out-of-frame Inter-chr q13.32 Transcription factor q24.3 Seq+ 86512 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK4-CATSPERG PAK4 chr19 39125919 + CATSPERG chr19 38358278 + Exonic hg38 BRCA TCGA-D8-A1XZ-01A 16 70 5'UTR-CDS Intra-chr q13.2 STE:STE20 q13.2 Seq+ 86513 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACOT7-FUCA1 ACOT7 chr1 6281102 - FUCA1 chr1 23854560 - Exonic hg38 BRCA TCGA-D8-A1XZ-01A 13 37 In-Frame Intra-chr p36.31 p36.11 Seq+ 86514 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM172A-EFNA5 FAM172A chr5 94111511 - EFNA5 chr5 107427509 - Exonic hg38 BRCA TCGA-D8-A1XZ-01A 8 38 5'UTR-CDS Intra-chr q15 Tumor suppressor gene q21.3 Tumor suppressor gene Seq+ 86515 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE7A-PREX2 PDE7A chr8 65734794 - PREX2 chr8 68038159 + Exonic hg38 BRCA TCGA-D8-A1XZ-01A 9 18 In-Frame Intra-chr q13.1 q13.2 Seq+ 86516 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRRM1-AUNIP SRRM1 chr1 24655129 + AUNIP chr1 25837554 - Exonic hg38 BRCA TCGA-D8-A1XZ-01A 5 34 Out-of-frame Intra-chr p36.11 p36.11 Seq+ 86517 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF699-ELAVL1 ZNF699 chr19 9302378 - ELAVL1 chr19 7991831 - Exonic hg38 BRCA TCGA-D8-A1XZ-01A 3 14 CDS-5'UTR Intra-chr p13.2 Transcription factor p13.2 Seq+ 86518 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBX1-SSH2 CBX1 chr17 48101268 - SSH2 chr17 29695523 - Exonic hg38 BRCA TCGA-D8-A1XZ-01A 4 8 5'UTR-CDS Intra-chr q21.32 q11.2 Seq+ 86519 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL11-CAMTA1 RPL11 chr1 23695908 + CAMTA1 chr1 7745845 + Exonic hg38 BRCA TCGA-D8-A1XZ-01A 2 14 Out-of-frame Intra-chr p36.11 Tumor suppressor gene p36.31 Tumor suppressor gene Transcription factor Seq+ 86520 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4A-HYI KDM4A chr1 43683804 + HYI chr1 43452319 - Exonic hg38 BRCA TCGA-D8-A1XZ-01A 2 13 Out-of-frame Intra-chr p34.2 p34.2 Seq+ 86521 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLIC4-SLC45A1 CLIC4 chr1 24745625 + SLC45A1 chr1 8324306 + Exonic hg38 BRCA TCGA-D8-A1XZ-01A 4 4 In-Frame Intra-chr p36.11 p36.23 86522 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKT2-YIF1B AKT2 chr19 40255158 - YIF1B chr19 38309643 - Exonic hg38 BRCA TCGA-D8-A1XZ-01A 1 15 Out-of-frame Intra-chr q13.2 AGC:Akt Oncogene q13.2 Seq+ 86523 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTBP-PQLC2 MTBP chr8 120446513 + PQLC2 chr1 19325495 + Exonic hg38 BRCA TCGA-D8-A1XZ-01A 2 10 Out-of-frame Inter-chr q24.12 p36.13 Seq+ 86524 ChimerSeq TCGA FAWG TCGA_RNA-Seq NELL1-CCDC83 NELL1 chr11 20960560 + CCDC83 chr11 85865096 + Exonic hg38 BRCA TCGA-D8-A1XZ-01A 2 10 CDS-5'UTR Intra-chr p15.1 q14.1 Seq+ 86525 ChimerSeq TCGA FAWG TCGA_RNA-Seq RERE-CYP4A11 RERE chr1 8465925 - CYP4A11 chr1 46938137 - Exonic hg38 BRCA TCGA-D8-A1XZ-01A 2 9 In-Frame Intra-chr p36.23 p33 Seq+ 86526 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTWD1-FAM227B DTWD1 chr15 49625431 + FAM227B chr15 49588083 - Exonic hg38 BRCA TCGA-D8-A1XZ-01A 1 10 Out-of-frame Intra-chr q21.2 q21.2 86527 ChimerSeq TCGA FAWG TCGA_RNA-Seq RERE-ZSWIM5 RERE chr1 8465925 - ZSWIM5 chr1 45088237 - Exonic hg38 BRCA TCGA-D8-A1XZ-01A 1 9 Out-of-frame Intra-chr p36.23 p34.1 Seq+ 86528 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK1-PARP10 TAOK1 chr17 29491865 + PARP10 chr8 143986438 - Exonic hg38 BRCA TCGA-D8-A1XZ-01A 1 5 CDS-5'UTR Inter-chr q11.2 q24.3 Seq+ 86529 ChimerSeq TCGA FAWG TCGA_RNA-Seq PQLC2-SCMH1 PQLC2 chr1 19317841 + SCMH1 chr1 41034048 - Exonic hg38 BRCA TCGA-D8-A1XZ-01A 1 4 Out-of-frame Intra-chr p36.13 p34.2 Transcription factor 86530 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMCO4-MAP7D1 TMCO4 chr1 19770542 - MAP7D1 chr1 36170971 + Exonic hg38 BRCA TCGA-D8-A1XZ-01A 1 3 In-Frame Intra-chr p36.13 p34.3 86531 ChimerSeq TCGA FAWG TCGA_RNA-Seq FLNA-TKTL1 FLNA chrX 154374506 - TKTL1 chrX 154305304 + Exonic hg38 BRCA TCGA-D8-A1Y0-01A 63 67 5'UTR-CDS Intra-chr q28 Tumor suppressor gene q28 Seq+ 86532 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDYHV1-CDHR2 WDYHV1 chr8 123430033 + CDHR2 chr5 176565338 + Exonic hg38 BRCA TCGA-D8-A1Y0-01A 17 58 5'UTR-5'UTR Inter-chr q24.13 q35.2 Seq+ 86533 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELOVL2-1 ELOVL2 chr6 10990415 - 1 chr6 11103715 - Exonic hg38 BRCA TCGA-D8-A1Y0-01A 5 26 Out-of-frame Intra-chr p24.2 86534 ChimerSeq TCGA FAWG TCGA_RNA-Seq NANS-NCBP1 NANS chr9 98083022 + NCBP1 chr9 97658640 + Exonic hg38 BRCA TCGA-D8-A1Y0-01A 5 17 Out-of-frame Intra-chr q22.33 q22.33 Seq+ 86535 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLIP4-TOGARAM2 CLIP4 chr2 29145367 + TOGARAM2 chr2 28994725 + Exonic hg38 BRCA TCGA-D8-A1Y0-01A 4 15 5'UTR-5'UTR Intra-chr p23.2 p23.2 86536 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC1A3-METTL15 SLC1A3 chr5 36671233 + METTL15 chr11 28290206 + Exonic hg38 BRCA TCGA-D8-A1Y0-01A 2 6 In-Frame Inter-chr p13.2 p14.1 Seq+ 86537 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL15-SLC1A3 METTL15 chr11 28211198 + SLC1A3 chr5 36674049 + Exonic hg38 BRCA TCGA-D8-A1Y0-01A 1 4 In-Frame Inter-chr p14.1 p13.2 86538 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC1-ZBTB8B HDAC1 chr1 32316782 + ZBTB8B chr1 32480891 + Exonic hg38 BRCA TCGA-D8-A1Y0-01A 1 3 In-Frame Intra-chr p35.2 Tumor suppressor gene p35.1 Transcription factor Seq+ 86539 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPP8-TICRR DPP8 chr15 65497864 - TICRR chr15 89592047 + Exonic hg38 BRCA TCGA-D8-A1Y2-01A 2 5 In-Frame Intra-chr q22.31 q26.1 Seq+ 86540 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSI2-PCTP MSI2 chr17 57262192 + PCTP chr17 55767335 + Exonic hg38 BRCA TCGA-D8-A27F-01A 61 197 In-Frame Intra-chr q22 q22 Seq+ 86541 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA5-UBN1 LAMA5 chr20 62362400 - UBN1 chr16 4868833 + Exonic hg38 BRCA TCGA-D8-A27F-01A 50 85 In-Frame Inter-chr q13.33 p13.3 Seq+ 86542 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELMSAN1-ENTPD5 ELMSAN1 chr14 73726928 - ENTPD5 chr14 73961359 - Exonic hg38 BRCA TCGA-D8-A27F-01A 40 90 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 86543 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKI-KCNT2 SKI chr1 2229735 + KCNT2 chr1 196492341 - Exonic hg38 BRCA TCGA-D8-A27F-01A 3 22 Out-of-frame Intra-chr p36.33 Transcription factor q31.3 Seq+ 86544 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBN1-LAMA5 UBN1 chr16 4861102 + LAMA5 chr20 62362552 - Exonic hg38 BRCA TCGA-D8-A27F-01A 1 14 In-Frame Inter-chr p13.3 q13.33 Seq+ 86545 ChimerSeq TCGA FAWG TCGA_RNA-Seq KPNB1-SKAP1 KPNB1 chr17 47670832 + SKAP1 chr17 48162569 - Exonic hg38 BRCA TCGA-D8-A27G-01A 13 61 Out-of-frame Intra-chr q21.32 q21.32 Seq+ 86546 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLK2-PITPNC1 TLK2 chr17 62481206 + PITPNC1 chr17 67532802 + Exonic hg38 BRCA TCGA-D8-A27G-01A 4 75 In-Frame Intra-chr q23.2 Other:TLK q24.2 Seq+ 86547 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOM1L2-ULK2 TOM1L2 chr17 17879627 - ULK2 chr17 19865828 - Exonic hg38 BRCA TCGA-D8-A27G-01A 3 4 In-Frame Intra-chr p11.2 Tumor suppressor gene p11.2 Other:ULK Seq+ 86548 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARSG-TEX2 ARSG chr17 68401450 + TEX2 chr17 64214242 - Exonic hg38 BRCA TCGA-D8-A27G-01A 1 5 CDS-5'UTR Intra-chr q24.2 q23.3 Seq+ 86549 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2B-ZBTB32 KMT2B chr19 35718381 + ZBTB32 chr19 35712917 + Exonic hg38 BRCA TCGA-D8-A27H-01A 101 54 CDS-5'UTR Intra-chr q13.12 Oncogene Transcription factor q13.12 Transcription factor 86550 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAMP2-SLC12A8 SCAMP2 chr15 74873199 - SLC12A8 chr3 125092198 - Exonic hg38 BRCA TCGA-D8-A27H-01A 12 95 Out-of-frame Inter-chr q24.1 q21.2 Seq+ 86551 ChimerSeq TCGA FAWG TCGA_RNA-Seq TARBP1-RBM34 TARBP1 chr1 234446803 - RBM34 chr1 235131997 - Exonic hg38 BRCA TCGA-D8-A27H-01A 13 77 Out-of-frame Intra-chr q42.2 q42.3 Seq+ 86552 ChimerSeq TCGA FAWG TCGA_RNA-Seq COQ4-DNM1 COQ4 chr9 128323147 + DNM1 chr9 128250115 + Exonic hg38 BRCA TCGA-D8-A27H-01A 12 59 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 86553 ChimerSeq TCGA FAWG TCGA_RNA-Seq IKZF1-LRBA IKZF1 chr7 50327757 + LRBA chr4 150286034 - Exonic hg38 BRCA TCGA-D8-A27H-01A 10 36 In-Frame Inter-chr p12.2 Oncogene Tumor suppressor gene Transcription factor q31.3 Seq+ 86554 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRCP-RAB30 PRCP chr11 82900235 - RAB30 chr11 82994122 - Exonic hg38 BRCA TCGA-D8-A27H-01A 4 16 In-Frame Intra-chr q14.1 q14.1 Seq+ 86555 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAML2-CNTN5 MAML2 chr11 96091892 - CNTN5 chr11 99844852 + Exonic hg38 BRCA TCGA-D8-A27H-01A 4 11 Out-of-frame Intra-chr q21 Oncogene q22.1 Seq+ 86556 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCTD20-JARID2 KCTD20 chr6 36470257 + JARID2 chr6 15374117 + Exonic hg38 BRCA TCGA-D8-A27H-01A 4 3 Out-of-frame Intra-chr p21.31 p22.3 Seq+ 86557 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIX-DAND5 NFIX chr19 13025552 + DAND5 chr19 12973389 + Exonic hg38 BRCA TCGA-D8-A27H-01A 2 11 Out-of-frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 86558 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESCO1-ABHD3 ESCO1 chr18 21560859 - ABHD3 chr18 21683965 - Exonic hg38 BRCA TCGA-D8-A27H-01A 3 6 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 86559 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO6-MSR1 MYO6 chr6 75749423 + MSR1 chr8 16177992 - Exonic hg38 BRCA TCGA-D8-A27H-01A 3 5 5'UTR-5'UTR Inter-chr q14.1 p22 Seq+ 86560 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB20-STON1 ZBTB20 chr3 114693528 - STON1 chr2 48529880 + Exonic hg38 BRCA TCGA-D8-A27H-01A 1 9 5'UTR-5'UTR Inter-chr q13.31 Transcription factor p16.3 86561 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP2M1-PHF2 AP2M1 chr3 184180251 + PHF2 chr9 93629970 + Exonic hg38 BRCA TCGA-D8-A27H-01A 1 7 Out-of-frame Inter-chr q27.1 q22.31 86562 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPAT3-MRPS18C GPAT3 chr4 83597515 + MRPS18C chr4 83456909 + Exonic hg38 BRCA TCGA-D8-A27H-01A 1 7 Out-of-frame Intra-chr q21.23 q21.23 86563 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R21-ZBTB20 PPP1R21 chr2 48486758 + ZBTB20 chr3 114582266 - Exonic hg38 BRCA TCGA-D8-A27H-01A 1 3 5'UTR-5'UTR Inter-chr p16.3 q13.31 Transcription factor 86564 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBR5-SSTR5 UBR5 chr8 102412173 - SSTR5 chr16 1078842 + Exonic hg38 BRCA TCGA-D8-A27L-01A 11 22 CDS-5'UTR Inter-chr q22.3 Oncogene p13.3 Seq+ 86565 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD151-CRACR2B CD151 chr11 837354 + CRACR2B chr11 831224 + Exonic hg38 BRCA TCGA-D8-A27M-01A 117 513 In-Frame Intra-chr p15.5 p15.5 86566 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK8-NPIPB15 CDK8 chr13 26254769 + NPIPB15 chr16 74381516 + Exonic hg38 BRCA TCGA-D8-A27M-01A 7 9 Out-of-frame Inter-chr q12.13 CMGC:CDK Oncogene q23.1 86567 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFATC2IP-HS3ST4 NFATC2IP chr16 28959100 + HS3ST4 chr16 26135612 + Exonic hg38 BRCA TCGA-D8-A27M-01A 4 14 Out-of-frame Intra-chr p11.2 p12.1 Seq+ 86568 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP35-YWHAZ ARHGAP35 chr19 46989675 + YWHAZ chr8 100925039 - Exonic hg38 BRCA TCGA-D8-A27M-01A 4 12 Out-of-frame Inter-chr q13.32 Transcription factor q22.3 Seq+ 86569 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANSL1L-ERBB4 KANSL1L chr2 210129031 - ERBB4 chr2 211630594 - Exonic hg38 BRCA TCGA-D8-A27M-01A 1 5 Out-of-frame Intra-chr q34 q34 Oncogene Tumor suppressor gene 86570 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC2-PHB TANC2 chr17 63009626 + PHB chr17 49413291 - Exonic hg38 BRCA TCGA-D8-A27N-01A 37 207 CDS-5'UTR Intra-chr q23.2 q21.33 Tumor suppressor gene Seq+ 86571 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP22-SLC39A11 USP22 chr17 21042665 - SLC39A11 chr17 72736719 - Exonic hg38 BRCA TCGA-D8-A27N-01A 49 102 Out-of-frame Intra-chr p11.2 q25.1 Seq+ 86572 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYTH1-MRC2 CYTH1 chr17 78736692 - MRC2 chr17 62664548 + Exonic hg38 BRCA TCGA-D8-A27N-01A 10 66 In-Frame Intra-chr q25.3 q23.2 Seq+ 86573 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSI2-TEX2 MSI2 chr17 57529724 + TEX2 chr17 64195095 - Exonic hg38 BRCA TCGA-D8-A27N-01A 6 61 Out-of-frame Intra-chr q22 q23.3 Seq+ 86574 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCI-TNIK PRKCI chr3 170235351 + TNIK chr3 171194635 - Exonic hg38 BRCA TCGA-D8-A27N-01A 13 33 Out-of-frame Intra-chr q26.2 q26.31 STE:STE20 Seq+ 86575 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNKS-ASAH1 TNKS chr8 9615677 + ASAH1 chr8 18064531 - Exonic hg38 BRCA TCGA-D8-A27N-01A 4 52 5'UTR-CDS Intra-chr p23.1 p22 Seq+ 86576 ChimerSeq TCGA FAWG TCGA_RNA-Seq BPTF-ABCC3 BPTF chr17 67854762 + ABCC3 chr17 50655832 + Exonic hg38 BRCA TCGA-D8-A27N-01A 7 9 Out-of-frame Intra-chr q24.2 Transcription factor q21.33 Seq+ 86577 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXK2-ABCA5 FOXK2 chr17 82584188 + ABCA5 chr17 69277842 - Exonic hg38 BRCA TCGA-D8-A27N-01A 3 19 In-Frame Intra-chr q25.3 Transcription factor q24.3 Seq+ 86578 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC6C-APPBP2 TNRC6C chr17 78093124 + APPBP2 chr17 60500487 - Exonic hg38 BRCA TCGA-D8-A27N-01A 6 5 Out-of-frame Intra-chr q25.3 q23.2 Seq+ 86579 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAALADL2-FBXO45 NAALADL2 chr3 175471758 + FBXO45 chr3 196577453 + Exonic hg38 BRCA TCGA-D8-A27N-01A 3 10 In-Frame Intra-chr q26.31 q29 Seq+ 86580 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEX2-TTYH2 TEX2 chr17 64193559 - TTYH2 chr17 74243374 + Exonic hg38 BRCA TCGA-D8-A27N-01A 1 10 Out-of-frame Intra-chr q23.3 q25.1 Seq+ 86581 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSI2-CA10 MSI2 chr17 57262192 + CA10 chr17 51931132 - Exonic hg38 BRCA TCGA-D8-A27N-01A 1 8 Out-of-frame Intra-chr q22 q22 Seq+ 86582 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERN1-SMTNL2 ERN1 chr17 64129976 - SMTNL2 chr17 4592361 + Exonic hg38 BRCA TCGA-D8-A27N-01A 1 5 In-Frame Intra-chr q23.3 p13.2 86583 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHHADH-ABCC5 EHHADH chr3 185204416 - ABCC5 chr3 183978651 - Exonic hg38 BRCA TCGA-D8-A27N-01A 1 4 In-Frame Intra-chr q27.2 q27.1 Seq+ 86584 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-PGA5 SHANK2 chr11 71056481 - PGA5 chr11 61241769 + Exonic hg38 BRCA TCGA-D8-A27N-01A 1 3 Out-of-frame Intra-chr q13.4 q12.2 86585 ChimerSeq TCGA FAWG TCGA_RNA-Seq RGPD5-NBEA RGPD5 chr2 109808404 + NBEA chr13 35583898 + Exonic hg38 BRCA TCGA-D8-A27R-01A 12 14 3'UTR-CDS Inter-chr q13 q13.3 Seq+ 86586 ChimerSeq TCGA FAWG TCGA_RNA-Seq LUC7L2-JAKMIP1 LUC7L2 chr7 139360322 + JAKMIP1 chr4 6112997 - Exonic hg38 BRCA TCGA-D8-A27R-01A 5 10 5'UTR-5'UTR Inter-chr q34 p16.1 Seq+ 86587 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP6-ADGRA2 SENP6 chr6 75663518 + ADGRA2 chr8 37814896 + Exonic hg38 BRCA TCGA-D8-A27R-01A 4 13 Out-of-frame Inter-chr q14.1 p11.23 Oncogene 86588 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM32-MELK TRIM32 chr9 116687381 + MELK chr9 36607575 + Exonic hg38 BRCA TCGA-D8-A27R-01A 4 13 5'UTR-5'UTR Intra-chr q33.1 Tumor suppressor gene p13.2 CAMK:CAMKL Seq+ 86589 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBR1-PSMD14 TBR1 chr2 161420257 + PSMD14 chr2 161395078 + Exonic hg38 BRCA TCGA-D8-A27R-01A 3 16 Out-of-frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 86590 ChimerSeq TCGA FAWG TCGA_RNA-Seq LNPEP-PART1 LNPEP chr5 97003546 + PART1 chr5 60521020 + Exonic hg38 BRCA TCGA-D8-A27R-01A 3 7 CDS-5'UTR Intra-chr q15 q12.1 Seq+ 86591 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCUBE2-DENND5A SCUBE2 chr11 9065891 - DENND5A chr11 9170777 - Exonic hg38 BRCA TCGA-D8-A27R-01A 1 8 In-Frame Intra-chr p15.4 Tumor suppressor gene p15.4 86592 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARMT1-RMND1 ARMT1 chr6 151458572 + RMND1 chr6 151436554 - Exonic hg38 BRCA TCGA-D8-A27R-01A 1 6 Out-of-frame Intra-chr q25.1 q25.1 86593 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLD6-COPS3 PLD6 chr17 17205860 - COPS3 chr17 17254945 - Exonic hg38 BRCA TCGA-D8-A27R-01A 1 4 Out-of-frame Intra-chr p11.2 p11.2 86594 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF213-SLC26A11 RNF213 chr17 80263778 + SLC26A11 chr17 80241771 + Exonic hg38 BRCA TCGA-D8-A27R-01A 1 4 In-Frame Intra-chr q25.3 Oncogene q25.3 Pub Seq+ 86595 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF185-SMTN RNF185 chr22 31160303 + SMTN chr22 31097269 + Exonic hg38 BRCA TCGA-D8-A27R-01A 1 2 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 86596 ChimerSeq TCGA FAWG TCGA_RNA-Seq HN1L-CRAMP1 HN1L chr16 1698843 + CRAMP1 chr16 1652496 + Exonic hg38 BRCA TCGA-D8-A27R-01A 1 1 Out-of-frame Intra-chr p13.3 86597 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOSR2-OMG GOSR2 chr17 46935169 + OMG chr17 31278240 - Exonic hg38 BRCA TCGA-D8-A27T-01A 5 30 CDS-3'UTR Intra-chr q21.32 q11.2 86598 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1XR1-CACNA1C TBL1XR1 chr3 177098466 - CACNA1C chr12 2611903 + Exonic hg38 BRCA TCGA-D8-A27V-01A 38 192 5'UTR-3'UTR Inter-chr q26.32 p13.33 Seq+ 86599 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUBCNL-LCP1 RUBCNL chr13 46356432 - LCP1 chr13 46144520 - Exonic hg38 BRCA TCGA-D8-A27V-01A 4 4 In-Frame Intra-chr q14.13 q14.13 86600 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC7A1-B4GALT4 SLC7A1 chr13 29595416 - B4GALT4 chr3 119230244 - Exonic hg38 BRCA TCGA-D8-A27V-01A 1 8 5'UTR-5'UTR Inter-chr q12.3 q13.32 Seq+ 86601 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMFR-ITGAM AMFR chr16 56385919 - ITGAM chr16 31321241 + Exonic hg38 BRCA TCGA-D8-A27W-01A 91 132 In-Frame Intra-chr q13 p11.2 Seq+ 86602 ChimerSeq TCGA FAWG TCGA_RNA-Seq COLGALT1-FMNL1 COLGALT1 chr19 17560444 + FMNL1 chr17 45234127 + Exonic hg38 BRCA TCGA-D8-A27W-01A 38 82 Out-of-frame Inter-chr p13.11 q21.31 Seq+ 86603 ChimerSeq TCGA FAWG TCGA_RNA-Seq MATR3-PCDHA13 MATR3 chr5 139293805 + PCDHA13 chr5 140978949 + Exonic hg38 BRCA TCGA-D8-A27W-01A 9 28 5'UTR-CDS Intra-chr q31.2 q31.3 Seq+ 86604 ChimerSeq TCGA FAWG TCGA_RNA-Seq MATR3-PCDHAC1 MATR3 chr5 139293805 + PCDHAC1 chr5 140978949 + Exonic hg38 BRCA TCGA-D8-A27W-01A 9 28 5'UTR-CDS Intra-chr q31.2 q31.3 Seq+ 86605 ChimerSeq TCGA FAWG TCGA_RNA-Seq MATR3-PCDHAC2 MATR3 chr5 139293805 + PCDHAC2 chr5 140978949 + Exonic hg38 BRCA TCGA-D8-A27W-01A 9 28 5'UTR-CDS Intra-chr q31.2 q31.3 Seq+ 86606 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAWR-CLEC2A PAWR chr12 79689729 - CLEC2A chr12 9916803 - Exonic hg38 BRCA TCGA-D8-A27W-01A 4 7 In-Frame Intra-chr q21.2 Tumor suppressor gene p13.31 Seq+ 86607 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEX5-CLSTN3 PEX5 chr12 7191700 + CLSTN3 chr12 7157489 + Exonic hg38 BRCA TCGA-D8-A27W-01A 1 3 In-Frame Intra-chr p13.31 p13.31 Seq+ 86608 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDDC2-SRSF11 HDDC2 chr6 125276458 - SRSF11 chr1 70251046 + Exonic hg38 BRCA TCGA-D8-A3Z5-01A 3 1 Out-of-frame Inter-chr q22.31 p31.1 86609 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGGY-CDH17 FGGY chr1 59512439 + CDH17 chr8 94162162 - Exonic hg38 BRCA TCGA-D8-A4Z1-01A 3 6 In-Frame Inter-chr p32.1 q22.1 Tumor suppressor gene Seq+ 86610 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFR3A-SMIM18 EFR3A chr8 131946633 + SMIM18 chr8 30644510 + Exonic hg38 BRCA TCGA-D8-A4Z1-01A 2 5 5'UTR-5'UTR Intra-chr q24.22 p12 86611 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX14-EYS SNX14 chr6 85593579 - EYS chr6 65495993 - Exonic hg38 BRCA TCGA-D8-A73W-01A 3 16 5'UTR-5'UTR Intra-chr q14.3 q12 Seq+ 86612 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZGPAT-CNBD2 ZGPAT chr20 63709164 + CNBD2 chr20 35987395 + Exonic hg38 BRCA TCGA-E2-A105-01A 11 57 In-Frame Intra-chr q13.33 Transcription factor q11.23 Seq+ 86613 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAM18-LSM1 ADAM18 chr8 39723907 + LSM1 chr8 38172033 - Exonic hg38 BRCA TCGA-E2-A105-01A 11 10 3'UTR-3'UTR Intra-chr p11.23 Seq+ 86614 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK13-TAX1BP1 CDK13 chr7 40002031 + TAX1BP1 chr7 27827738 + Exonic hg38 BRCA TCGA-E2-A105-01A 6 18 Out-of-frame Intra-chr p14.1 p15.2 Seq+ 86615 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIB1-SLC25A32 TRIB1 chr8 125433609 + SLC25A32 chr8 103407784 - Exonic hg38 BRCA TCGA-E2-A105-01A 6 6 Out-of-frame Intra-chr q24.13 q22.3 Seq+ 86616 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP12-DESI1 ARHGAP12 chr10 31908172 - DESI1 chr22 41607861 - Exonic hg38 BRCA TCGA-E2-A105-01A 3 9 Out-of-frame Inter-chr p11.22 q13.2 Seq+ 86617 ChimerSeq TCGA FAWG TCGA_RNA-Seq GDPD1-COX8A GDPD1 chr17 59248785 + COX8A chr11 63976225 + Exonic hg38 BRCA TCGA-E2-A105-01A 1 10 Out-of-frame Inter-chr q22 q13.1 86618 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM65C-ZNF335 FAM65C chr20 50604645 - ZNF335 chr20 45950595 - Exonic hg38 BRCA TCGA-E2-A105-01A 2 2 Out-of-frame Intra-chr q13.12 Transcription factor Seq+ 86619 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13B-TERF1 VPS13B chr8 99577633 + TERF1 chr8 73020684 + Exonic hg38 BRCA TCGA-E2-A105-01A 2 1 Out-of-frame Intra-chr q22.2 q21.11 Transcription factor Seq+ 86620 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZGPAT-HELZ2 ZGPAT chr20 63709164 + HELZ2 chr20 63559370 - Exonic hg38 BRCA TCGA-E2-A105-01A 1 3 Out-of-frame Intra-chr q13.33 Transcription factor q13.33 86621 ChimerSeq TCGA FAWG TCGA_RNA-Seq LSM1-NSMCE2 LSM1 chr8 38176275 - NSMCE2 chr8 125151171 + Exonic hg38 BRCA TCGA-E2-A105-01A 1 1 In-Frame Intra-chr p11.23 q24.13 86622 ChimerSeq TCGA FAWG TCGA_RNA-Seq UHRF1-ACTA2 UHRF1 chr19 4911038 + ACTA2 chr10 88947386 - Exonic hg38 BRCA TCGA-E2-A106-01A 24 108 In-Frame Inter-chr p13.3 q23.31 Seq+ 86623 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-ELP4 SHANK2 chr11 70659828 - ELP4 chr11 31783393 + Exonic hg38 BRCA TCGA-E2-A106-01A 17 81 In-Frame Intra-chr q13.4 p13 Seq+ 86624 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF4EBP1-POLR1D EIF4EBP1 chr8 38030718 + POLR1D chr13 27738707 + Exonic hg38 BRCA TCGA-E2-A106-01A 23 34 CDS-3'UTR Inter-chr p11.23 q12.2 86625 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCMTD2-CHD6 PCMTD2 chr20 64268010 + CHD6 chr20 41551360 - Exonic hg38 BRCA TCGA-E2-A106-01A 7 40 3'UTR-5'UTR Intra-chr q12 Seq+ 86626 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KA1-RASGRP3 RPS6KA1 chr1 26536969 + RASGRP3 chr2 33534323 + Exonic hg38 BRCA TCGA-E2-A106-01A 7 33 3'UTR-CDS Inter-chr p22.3 Seq+ 86627 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM254-CREB3L3 TMEM254 chr10 80082204 + CREB3L3 chr19 4170140 + Exonic hg38 BRCA TCGA-E2-A106-01A 9 10 In-Frame Inter-chr q22.3 p13.3 Transcription factor Seq+ 86628 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD6-TSHZ2 CHD6 chr20 41445665 - TSHZ2 chr20 53444251 + Exonic hg38 BRCA TCGA-E2-A106-01A 5 13 CDS-3'UTR Intra-chr q12 q13.2 Transcription factor Seq+ 86629 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNMA1-RFX2 KCNMA1 chr10 77637265 - RFX2 chr19 6047504 - Exonic hg38 BRCA TCGA-E2-A106-01A 3 5 CDS-5'UTR Inter-chr q22.3 p13.3 Transcription factor Seq+ 86630 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABR-YWHAE ABR chr17 1228793 - YWHAE chr17 1365058 - Exonic hg38 BRCA TCGA-E2-A106-01A 1 1 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 86631 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUMA1-PITPNM1 NUMA1 chr11 72007189 - PITPNM1 chr11 67498322 - Exonic hg38 BRCA TCGA-E2-A107-01A 21 90 Out-of-frame Intra-chr q13.4 Oncogene q13.2 Seq+ 86632 ChimerSeq TCGA FAWG TCGA_RNA-Seq BPIFA4P-RALY BPIFA4P chr20 33193641 + RALY chr20 34031522 + Exonic hg38 BRCA TCGA-E2-A107-01A 3 7 5'UTR-5'UTR Intra-chr q11.21 q11.22 Seq+ 86633 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALKBH5-MYO15A ALKBH5 chr17 18185013 + MYO15A chr17 18167590 + Exonic hg38 BRCA TCGA-E2-A108-01A 3 12 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 86634 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUS1-SFSWAP PUS1 chr12 131939275 + SFSWAP chr12 131766118 + Exonic hg38 BRCA TCGA-E2-A108-01A 1 3 In-Frame Intra-chr q24.33 q24.33 Seq+ 86635 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANBP10-RRP15 RANBP10 chr16 67805428 - RRP15 chr1 218330948 + Exonic hg38 BRCA TCGA-E2-A109-01A 103 240 Out-of-frame Inter-chr q22.1 q41 Seq+ 86636 ChimerSeq TCGA FAWG TCGA_RNA-Seq EVPL-MAP2K6 EVPL chr17 76027101 - MAP2K6 chr17 69505780 + Exonic hg38 BRCA TCGA-E2-A109-01A 27 76 Out-of-frame Intra-chr q25.1 q24.3 STE:STE7 Seq+ 86637 ChimerSeq TCGA FAWG TCGA_RNA-Seq NXT1-VPS16 NXT1 chr20 23351061 + VPS16 chr20 2859719 + Exonic hg38 BRCA TCGA-E2-A109-01A 26 56 5'UTR-CDS Intra-chr p11.21 p13 Seq+ 86638 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-PAK1 UVRAG chr11 76116015 + PAK1 chr11 77323360 - Exonic hg38 BRCA TCGA-E2-A109-01A 12 56 Out-of-frame Intra-chr q13.5 Tumor suppressor gene q14.1 STE:STE20 Seq+ 86639 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP43-ENDOV USP43 chr17 9701700 + ENDOV chr17 80425032 + Exonic hg38 BRCA TCGA-E2-A109-01A 10 21 Out-of-frame Intra-chr p13.1 q25.3 Seq+ 86640 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2CD3-P2RY6 C2CD3 chr11 74118228 - P2RY6 chr11 73296485 + Exonic hg38 BRCA TCGA-E2-A109-01A 9 21 In-Frame Intra-chr q13.4 q13.4 Seq+ 86641 ChimerSeq TCGA FAWG TCGA_RNA-Seq CENPV-FERMT1 CENPV chr17 16344597 - FERMT1 chr20 6116044 - Exonic hg38 BRCA TCGA-E2-A109-01A 8 18 In-Frame Inter-chr p11.2 p12.3 Seq+ 86642 ChimerSeq TCGA FAWG TCGA_RNA-Seq CES2-GPATCH2 CES2 chr16 66938241 + GPATCH2 chr1 217449337 - Exonic hg38 BRCA TCGA-E2-A109-01A 8 12 In-Frame Inter-chr q22.1 q41 Seq+ 86643 ChimerSeq TCGA FAWG TCGA_RNA-Seq FERMT1-CDRT4 FERMT1 chr20 6115811 - CDRT4 chr17 15438200 - Exonic hg38 BRCA TCGA-E2-A109-01A 6 15 In-Frame Inter-chr p12.3 p12 Seq+ 86644 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS35-SLC6A2 VPS35 chr16 46668930 - SLC6A2 chr16 55656644 + Exonic hg38 BRCA TCGA-E2-A109-01A 5 19 CDS-5'UTR Intra-chr q11.2 q12.2 Seq+ 86645 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2K4-DNAH9 MAP2K4 chr17 12129287 + DNAH9 chr17 11961867 + Exonic hg38 BRCA TCGA-E2-A109-01A 6 13 Out-of-frame Intra-chr p12 STE:STE7 Oncogene Tumor suppressor gene p12 Seq+ 86646 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC59-B4GALNT2 LRRC59 chr17 50392398 - B4GALNT2 chr17 49141247 + Exonic hg38 BRCA TCGA-E2-A109-01A 5 13 Out-of-frame Intra-chr q21.33 q21.32 Seq+ 86647 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTN3A2-HIST1H2AC BTN3A2 chr6 26374798 + HIST1H2AC chr6 26138054 + Exonic hg38 BRCA TCGA-E2-A109-01A 1 21 3'UTR-3'UTR Intra-chr p22.2 p22.2 Seq+ 86648 ChimerSeq TCGA FAWG TCGA_RNA-Seq YPEL2-HSPA12B YPEL2 chr17 59331824 + HSPA12B chr20 3749969 + Exonic hg38 BRCA TCGA-E2-A109-01A 3 9 5'UTR-CDS Inter-chr q22 p13 Seq+ 86649 ChimerSeq TCGA FAWG TCGA_RNA-Seq HACE1-FBLN1 HACE1 chr6 104833042 - FBLN1 chr22 45518682 + Exonic hg38 BRCA TCGA-E2-A109-01A 2 10 Out-of-frame Inter-chr q16.3 Tumor suppressor gene q13.31 Tumor suppressor gene Seq+ 86650 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-FRMD8 PPFIA1 chr11 70272436 + FRMD8 chr11 65393573 + Exonic hg38 BRCA TCGA-E2-A109-01A 2 9 Out-of-frame Intra-chr q13.3 q13.1 Seq+ 86651 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFNA4-C20orf96 EFNA4 chr1 155067440 + C20orf96 chr20 284081 - Exonic hg38 BRCA TCGA-E2-A109-01A 1 8 In-Frame Inter-chr q21.3 p13 Seq+ 86652 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCC5-NAALADL2 ABCC5 chr3 184014264 - NAALADL2 chr3 175096790 + Exonic hg38 BRCA TCGA-E2-A109-01A 1 3 Out-of-frame Intra-chr q27.1 q26.31 86653 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARRB1-TPCN2 ARRB1 chr11 75283287 - TPCN2 chr11 69078482 + Exonic hg38 BRCA TCGA-E2-A109-01A 1000 1000 In-Frame Intra-chr q13.4 q13.3 86654 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAI1-2 RAI1 chr17 17793202 + 2 chr20 21514026 - Exonic hg38 BRCA TCGA-E2-A109-01A 1000 1000 Out-of-frame Inter-chr p11.2 86655 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACF1-FAF1 MACF1 chr1 39427614 + FAF1 chr1 50596216 - Exonic hg38 BRCA TCGA-E2-A10A-01A 13 60 In-Frame Intra-chr p34.3 p32.3 Seq+ 86656 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGPS2-QSOX1 RALGPS2 chr1 178777447 + QSOX1 chr1 180194213 + Exonic hg38 BRCA TCGA-E2-A10A-01A 3 34 Out-of-frame Intra-chr q25.2 q25.2 Seq+ 86657 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRC2C-CENPL PRRC2C chr1 171571421 + CENPL chr1 173824019 - Exonic hg38 BRCA TCGA-E2-A10A-01A 4 22 CDS-5'UTR Intra-chr q24.3 q25.1 Seq+ 86658 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3GAP1-MAP4K3 RAB3GAP1 chr2 135153876 + MAP4K3 chr2 39272542 - Exonic hg38 BRCA TCGA-E2-A10A-01A 2 10 In-Frame Intra-chr q21.3 p22.1 Seq+ 86659 ChimerSeq TCGA FAWG TCGA_RNA-Seq STRAP-MYO7A STRAP chr12 15883676 + MYO7A chr11 77155907 + Exonic hg38 BRCA TCGA-E2-A10A-01A 1 12 Out-of-frame Inter-chr p12.3 q13.5 86660 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACBD6-GON4L ACBD6 chr1 180495461 - GON4L chr1 155785374 - Exonic hg38 BRCA TCGA-E2-A10A-01A 2 5 Out-of-frame Intra-chr q25.3 q22 Seq+ 86661 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNRNP48-NISCH SNRNP48 chr6 7595101 + NISCH chr3 52484513 + Exonic hg38 BRCA TCGA-E2-A10A-01A 2 1 In-Frame Inter-chr p24.3 p21.1 Seq+ 86662 ChimerSeq TCGA FAWG TCGA_RNA-Seq PATJ-KANK4 PATJ chr1 62084647 + KANK4 chr1 62238382 - Exonic hg38 BRCA TCGA-E2-A10A-01A 1000 1000 Out-of-frame Intra-chr p31.3 p31.3 86663 ChimerSeq TCGA FAWG TCGA_RNA-Seq LLPH-ADK LLPH chr12 66130705 - ADK chr10 74589282 + Exonic hg38 BRCA TCGA-E2-A10C-01A 1 29 5'UTR-5'UTR Inter-chr q14.3 q22.2 Seq+ 86664 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANK3-WDFY4 ANK3 chr10 60145968 - WDFY4 chr10 48709716 + Exonic hg38 BRCA TCGA-E2-A10C-01A 5 7 CDS-5'UTR Intra-chr q21.2 q11.23 Seq+ 86665 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPS2-GRID1 CAPS2 chr12 75390322 - GRID1 chr10 86206648 - Exonic hg38 BRCA TCGA-E2-A10C-01A 2 14 5'UTR-CDS Inter-chr q21.2 q23.2 86666 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPM-KCNMA1 CPM chr12 68932678 - KCNMA1 chr10 76910096 - Exonic hg38 BRCA TCGA-E2-A10C-01A 1 10 In-Frame Inter-chr q15 q22.3 Seq+ 86667 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBR4-ERBB4 CBR4 chr4 169002071 - ERBB4 chr2 212124903 - Exonic hg38 BRCA TCGA-E2-A10E-01A 2 3 In-Frame Inter-chr q32.3 q34 Oncogene Tumor suppressor gene Seq+ 86668 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK1-PRSS23 PAK1 chr11 77392331 - PRSS23 chr11 86823377 + Exonic hg38 BRCA TCGA-E2-A10E-01A 1 6 CDS-5'UTR Intra-chr q14.1 STE:STE20 q14.2 Seq+ 86669 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRL3-PPP3CA ADGRL3 chr4 61813889 + PPP3CA chr4 101109078 - Exonic hg38 BRCA TCGA-E2-A10F-01A 2 3 In-Frame Intra-chr q13.1 Oncogene q24 86670 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPN6-DCX CAPN6 chrX 111247368 - DCX chrX 111301743 - Exonic hg38 BRCA TCGA-E2-A14N-01A 3 29 In-Frame Intra-chr q23 q23 Seq+ 86671 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD3-BRD4 FRMD3 chr9 83372913 - BRD4 chr19 15254262 - Exonic hg38 BRCA TCGA-E2-A14N-01A 9 5 In-Frame Inter-chr q21.32 p13.12 Atypical:BRD Seq+ 86672 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZHX2-VAV3 ZHX2 chr8 122863539 + VAV3 chr1 107642755 - Exonic hg38 BRCA TCGA-E2-A14N-01A 5 5 5'UTR-CDS Inter-chr q24.13 Tumor suppressor gene Transcription factor p13.3 Seq+ 86673 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK5RAP2-ENG CDK5RAP2 chr9 120518427 - ENG chr9 127826672 - Exonic hg38 BRCA TCGA-E2-A14N-01A 3 12 In-Frame Intra-chr q33.2 q34.11 Seq+ 86674 ChimerSeq TCGA FAWG TCGA_RNA-Seq VAV3-ZHX2 VAV3 chr1 107596212 - ZHX2 chr8 122863477 + Exonic hg38 BRCA TCGA-E2-A14N-01A 2 11 CDS-5'UTR Inter-chr p13.3 q24.13 Tumor suppressor gene Transcription factor Seq+ 86675 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D4-COMMD6 TBC1D4 chr13 75481270 - COMMD6 chr13 75526639 - Exonic hg38 BRCA TCGA-E2-A14N-01A 1 13 In-Frame Intra-chr q22.2 q22.2 Seq+ 86676 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP3CA-SPARCL1 PPP3CA chr4 101346739 - SPARCL1 chr4 87499585 - Exonic hg38 BRCA TCGA-E2-A14N-01A 2 7 CDS-5'UTR Intra-chr q24 q22.1 Tumor suppressor gene Seq+ 86677 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCRP2-UFD1L BCRP2 chr22 21103226 + UFD1L chr22 19458139 - Exonic hg38 BRCA TCGA-E2-A14N-01A 1 7 Out-of-frame Intra-chr q11.21 86678 ChimerSeq TCGA FAWG TCGA_RNA-Seq GXYLT1-YAF2 GXYLT1 chr12 42129759 - YAF2 chr12 42161765 - Exonic hg38 BRCA TCGA-E2-A14N-01A 1 7 In-Frame Intra-chr q12 q12 86679 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-OPCML SHANK2 chr11 70659828 - OPCML chr11 132529186 - Exonic hg38 BRCA TCGA-E2-A14N-01A 1 4 Out-of-frame Intra-chr q13.4 q25 Tumor suppressor gene Seq+ 86680 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNAI3-SARS GNAI3 chr1 109548838 + SARS chr1 109223978 + Exonic hg38 BRCA TCGA-E2-A14P-01A 55 259 In-Frame Intra-chr p13.3 p13.3 Seq+ 86681 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRG1FP-PPP1R1B FRG1FP chr22 10947304 - PPP1R1B chr17 39629972 + Exonic hg38 BRCA TCGA-E2-A14P-01A 31 52 3'UTR-CDS Inter-chr q12 Tumor suppressor gene 86682 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKFN1-LRRC37A16P ANKFN1 chr17 56046325 + LRRC37A16P chr17 68147523 - Exonic hg38 BRCA TCGA-E2-A14P-01A 20 65 Out-of-frame Intra-chr q22 q24.2 86683 ChimerSeq TCGA FAWG TCGA_RNA-Seq VEZF1-ANKFN1 VEZF1 chr17 57988079 - ANKFN1 chr17 56046072 + Exonic hg38 BRCA TCGA-E2-A14P-01A 17 31 5'UTR-5'UTR Intra-chr q22 Transcription factor q22 86684 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSK3B-FSTL1 GSK3B chr3 120002046 - FSTL1 chr3 120416027 - Exonic hg38 BRCA TCGA-E2-A14P-01A 7 44 In-Frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q13.33 Seq+ 86685 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGL-TBC1D26 PIGL chr17 16234070 + TBC1D26 chr17 15740100 + Exonic hg38 BRCA TCGA-E2-A14P-01A 5 51 In-Frame Intra-chr p11.2 p12 Seq+ 86686 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELSR1-CERK CELSR1 chr22 46533627 - CERK chr22 46687206 - Exonic hg38 BRCA TCGA-E2-A14P-01A 3 50 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 86687 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED24-IKZF3 MED24 chr17 40020273 - IKZF3 chr17 39792933 - Exonic hg38 BRCA TCGA-E2-A14P-01A 5 23 In-Frame Intra-chr q21.1 q21.1 Tumor suppressor gene Transcription factor Seq+ 86688 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC42EP2-CAPN1 CDC42EP2 chr11 65314954 + CAPN1 chr11 65204683 + Exonic hg38 BRCA TCGA-E2-A14P-01A 4 19 5'UTR-5'UTR Intra-chr q13.1 q13.1 Seq+ 86689 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR76-PDIA3 WDR76 chr15 43836216 + PDIA3 chr15 43753824 + Exonic hg38 BRCA TCGA-E2-A14P-01A 4 15 In-Frame Intra-chr q15.3 q15.3 Seq+ 86690 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1XR1-PIK3CA TBL1XR1 chr3 177197121 - PIK3CA chr3 179198750 + Exonic hg38 BRCA TCGA-E2-A14P-01A 5 6 5'UTR-5'UTR Intra-chr q26.32 q26.32 Oncogene Seq+ 86691 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-GH2 BCAS3 chr17 61084564 + GH2 chr17 63881519 - Exonic hg38 BRCA TCGA-E2-A14P-01A 1 10 In-Frame Intra-chr q23.2 q23.3 Seq+ 86692 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP13-PIK3CA USP13 chr3 179701129 + PIK3CA chr3 179224081 + Exonic hg38 BRCA TCGA-E2-A14P-01A 1 10 In-Frame Intra-chr q26.33 q26.32 Oncogene Seq+ 86693 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYCBP2-RNF219 MYCBP2 chr13 77233156 - RNF219 chr13 78644997 - Exonic hg38 BRCA TCGA-E2-A14P-01A 1 4 Out-of-frame Intra-chr q22.3 q31.1 Seq+ 86694 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1211-STMN1 KIAA1211 chr4 56179430 + STMN1 chr1 25904738 - Exonic hg38 BRCA TCGA-E2-A14Q-01A 19 39 5'UTR-5'UTR Inter-chr q12 p36.11 Seq+ 86695 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRAS1-DCK FRAS1 chr4 78452354 + DCK chr4 71022367 + Exonic hg38 BRCA TCGA-E2-A14Q-01A 5 5 Out-of-frame Intra-chr q21.21 q13.3 Seq+ 86696 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRAS1-MOB1B FRAS1 chr4 78452354 + MOB1B chr4 71022367 + Exonic hg38 BRCA TCGA-E2-A14Q-01A 5 4 CDS-3'UTR Intra-chr q21.21 q13.3 Tumor suppressor gene 86697 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMX1B-RAD51B LMX1B chr9 126615569 + RAD51B chr14 68682937 + Exonic hg38 BRCA TCGA-E2-A14R-01A 32 133 Out-of-frame Inter-chr q33.3 Transcription factor q24.1 Seq+ 86698 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD51B-LMX1B RAD51B chr14 68545624 + LMX1B chr9 126690836 + Exonic hg38 BRCA TCGA-E2-A14R-01A 17 25 3'UTR-CDS Inter-chr q24.1 q33.3 Transcription factor Seq+ 86699 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBFOX2-VN2R3P RBFOX2 chr22 35781600 - VN2R3P chr9 39017025 + Exonic hg38 BRCA TCGA-E2-A14R-01A 11 8 Out-of-frame Inter-chr p12 Seq+ 86700 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOP1-PZP TOP1 chr20 41061490 + PZP chr12 9203951 - Exonic hg38 BRCA TCGA-E2-A14R-01A 4 18 In-Frame Inter-chr q12 Oncogene p13.31 Seq+ 86701 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBOAT2-ARHGAP25 MBOAT2 chr2 8873108 - ARHGAP25 chr2 68775221 + Exonic hg38 BRCA TCGA-E2-A14R-01A 2 13 In-Frame Intra-chr p25.1 p13.3 Seq+ 86702 ChimerSeq TCGA FAWG TCGA_RNA-Seq YWHAE-TLCD2 YWHAE chr17 1400047 - TLCD2 chr17 1709581 - Exonic hg38 BRCA TCGA-E2-A14R-01A 4 5 5'UTR-5'UTR Intra-chr p13.3 Seq+ 86703 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK4-TTC4 PAK4 chr19 39125919 + TTC4 chr1 54716600 + Exonic hg38 BRCA TCGA-E2-A14R-01A 1 15 5'UTR-CDS Inter-chr q13.2 STE:STE20 p32.3 Tumor suppressor gene 86704 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHM1-GAA PLEKHM1 chr17 45475100 - GAA chr17 80107557 + Exonic hg38 BRCA TCGA-E2-A14R-01A 3 6 5'UTR-CDS Intra-chr q25.3 Seq+ 86705 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA5-GPC6 PLEKHA5 chr12 19132450 + GPC6 chr13 94286349 + Exonic hg38 BRCA TCGA-E2-A14R-01A 2 2 Out-of-frame Inter-chr p12.3 q31.3 Seq+ 86706 ChimerSeq TCGA FAWG TCGA_RNA-Seq PZP-CPNE4 PZP chr12 9180983 - CPNE4 chr3 131723625 - Exonic hg38 BRCA TCGA-E2-A14R-01A 1 5 In-Frame Inter-chr p13.31 q22.1 Seq+ 86707 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD50-ATP2B1 ANKRD50 chr4 124710000 - ATP2B1 chr12 89635251 - Exonic hg38 BRCA TCGA-E2-A14R-01A 1 1 Out-of-frame Inter-chr q28.1 q21.33 86708 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF3C6-LACE1 GTF3C6 chr6 110959252 + LACE1 chr6 108510212 + Exonic hg38 BRCA TCGA-E2-A14S-01A 26 72 Out-of-frame Intra-chr q21 Seq+ 86709 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-ARHGAP32 PPFIA1 chr11 70272436 + ARHGAP32 chr11 129093707 - Exonic hg38 BRCA TCGA-E2-A14S-01A 18 62 In-Frame Intra-chr q13.3 q24.3 Seq+ 86710 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1A-YTHDF2 ARID1A chr1 26732792 + YTHDF2 chr1 28737658 + Exonic hg38 BRCA TCGA-E2-A14T-01A 62 156 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p35.3 Seq+ 86711 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM117-ZCRB1 TMEM117 chr12 43844928 + ZCRB1 chr12 42324104 - Exonic hg38 BRCA TCGA-E2-A14T-01A 18 26 5'UTR-5'UTR Intra-chr q12 q12 Seq+ 86712 ChimerSeq TCGA FAWG TCGA_RNA-Seq HELZ-PRCD HELZ chr17 67135970 - PRCD chr17 76553109 + Exonic hg38 BRCA TCGA-E2-A14T-01A 9 40 CDS-3'UTR Intra-chr q24.2 q25.1 86713 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC7-IRAK4 HDAC7 chr12 47791259 - IRAK4 chr12 43768103 + Exonic hg38 BRCA TCGA-E2-A14T-01A 7 46 CDS-5'UTR Intra-chr q13.11 q12 TKL:IRAK Seq+ 86714 ChimerSeq TCGA FAWG TCGA_RNA-Seq THRAP3-MUTYH THRAP3 chr1 36224505 + MUTYH chr1 45334511 - Exonic hg38 BRCA TCGA-E2-A14T-01A 5 23 5'UTR-5'UTR Intra-chr p34.3 p34.1 Oncogene Seq+ 86715 ChimerSeq TCGA FAWG TCGA_RNA-Seq PYROXD1-SLC2A14 PYROXD1 chr12 21440448 + SLC2A14 chr12 7832814 - Exonic hg38 BRCA TCGA-E2-A14T-01A 4 21 In-Frame Intra-chr p12.1 p13.31 Seq+ 86716 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASK-GLIPR1L1 CASK chrX 41922930 - GLIPR1L1 chr12 75343693 + Exonic hg38 BRCA TCGA-E2-A14T-01A 2 15 Out-of-frame Inter-chr p11.4 CAMK:CASK q21.2 Seq+ 86717 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERICH1-PCM1 ERICH1 chr8 715861 - PCM1 chr8 18025361 + Exonic hg38 BRCA TCGA-E2-A14T-01A 3 10 Out-of-frame Intra-chr p22 Seq+ 86718 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMS-DYRK2 SMS chrX 21940873 + DYRK2 chr12 67649797 + Exonic hg38 BRCA TCGA-E2-A14T-01A 2 6 In-Frame Inter-chr p22.11 q15 CMGC:DYRK Seq+ 86719 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCML2-PPHLN1 SCML2 chrX 18260171 - PPHLN1 chr12 42335883 + Exonic hg38 BRCA TCGA-E2-A14T-01A 1 5 In-Frame Inter-chr p22.13 q12 86720 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP1-PITPNC1 AKAP1 chr17 57085398 + PITPNC1 chr17 67578186 + Exonic hg38 BRCA TCGA-E2-A14V-01A 379 259 5'UTR-CDS Intra-chr q22 q24.2 Seq+ 86721 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1D-TRIM37 PPM1D chr17 60633977 + TRIM37 chr17 58982921 - Exonic hg38 BRCA TCGA-E2-A14V-01A 91 276 Out-of-frame Intra-chr q23.2 q22 Seq+ 86722 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNCRIP-CDK19 SYNCRIP chr6 85642797 - CDK19 chr6 110746201 - Exonic hg38 BRCA TCGA-E2-A14V-01A 36 209 5'UTR-5'UTR Intra-chr q14.3 q21 Seq+ 86723 ChimerSeq TCGA FAWG TCGA_RNA-Seq BPTF-FAM117A BPTF chr17 67966656 + FAM117A chr17 49720436 - Exonic hg38 BRCA TCGA-E2-A14V-01A 40 147 Out-of-frame Intra-chr q24.2 Transcription factor q21.33 Seq+ 86724 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNFT1-PAAF1 RNFT1 chr17 59964608 - PAAF1 chr11 73878779 + Exonic hg38 BRCA TCGA-E2-A14V-01A 21 66 In-Frame Inter-chr q23.1 q13.4 Seq+ 86725 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNAPC5-BPIFB4 SNAPC5 chr15 66497642 - BPIFB4 chr20 33104810 + Exonic hg38 BRCA TCGA-E2-A14V-01A 17 67 In-Frame Inter-chr q22.31 Transcription factor q11.21 Seq+ 86726 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPOP-TAOK1 SPOP chr17 49601865 - TAOK1 chr17 29542561 + Exonic hg38 BRCA TCGA-E2-A14V-01A 15 25 Out-of-frame Intra-chr q21.33 Oncogene Tumor suppressor gene q11.2 Seq+ 86727 ChimerSeq TCGA FAWG TCGA_RNA-Seq PREP-LDLRAD4 PREP chr6 105397853 - LDLRAD4 chr18 13621117 + Exonic hg38 BRCA TCGA-E2-A14V-01A 10 11 Out-of-frame Inter-chr q21 p11.21 Seq+ 86728 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSH2-NARS2 SSH2 chr17 29761150 - NARS2 chr11 78443758 - Exonic hg38 BRCA TCGA-E2-A14V-01A 4 24 Out-of-frame Inter-chr q11.2 q14.1 Seq+ 86729 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX14-COL21A1 SNX14 chr6 85572137 - COL21A1 chr6 56091583 - Exonic hg38 BRCA TCGA-E2-A14V-01A 4 10 5'UTR-5'UTR Intra-chr q14.3 p12.1 Seq+ 86730 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF12-ANO1 PHF12 chr17 28951467 - ANO1 chr11 70182502 + Exonic hg38 BRCA TCGA-E2-A14V-01A 6 0 5'UTR-5'UTR Inter-chr q11.2 q13.3 86731 ChimerSeq TCGA FAWG TCGA_RNA-Seq KSR1-MSI2 KSR1 chr17 27456874 + MSI2 chr17 57401379 + Exonic hg38 BRCA TCGA-E2-A14V-01A 3 7 In-Frame Intra-chr q11.2 TKL:RAF q22 Seq+ 86732 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1D-ATP5G1 PPM1D chr17 60663051 + ATP5G1 chr17 48893409 + Exonic hg38 BRCA TCGA-E2-A14V-01A 3 6 Out-of-frame Intra-chr q23.2 q21.32 Seq+ 86733 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF12-CDK12 PHF12 chr17 28950065 - CDK12 chr17 39470879 + Exonic hg38 BRCA TCGA-E2-A14V-01A 3 4 In-Frame Intra-chr q11.2 q12 Oncogene 86734 ChimerSeq TCGA FAWG TCGA_RNA-Seq VMP1-FAM222B VMP1 chr17 59707748 + FAM222B chr17 28766707 - Exonic hg38 BRCA TCGA-E2-A14V-01A 2 5 5'UTR-5'UTR Intra-chr q23.1 q11.2 86735 ChimerSeq TCGA FAWG TCGA_RNA-Seq BPIFB1-SNAPC5 BPIFB1 chr20 33291988 + SNAPC5 chr15 66495419 - Exonic hg38 BRCA TCGA-E2-A14V-01A 2 4 In-Frame Inter-chr q11.21 q22.31 Transcription factor Seq+ 86736 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX19A-IL15RA DDX19A chr16 70365131 + IL15RA chr10 5968928 - Exonic hg38 BRCA TCGA-E2-A14V-01A 1 7 In-Frame Inter-chr q22.1 p15.1 86737 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKS1-KSR1 MKS1 chr17 58216666 - KSR1 chr17 27577492 + Exonic hg38 BRCA TCGA-E2-A14V-01A 1 3 In-Frame Intra-chr q22 q11.2 TKL:RAF Seq+ 86738 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1H-FAM19A2 PPM1H chr12 62934492 - FAM19A2 chr12 61710417 - Exonic hg38 BRCA TCGA-E2-A14W-01A 3 21 Out-of-frame Intra-chr q14.2 q14.1 Seq+ 86739 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP12-TRAPPC9 LRP12 chr8 104531907 - TRAPPC9 chr8 140024079 - Exonic hg38 BRCA TCGA-E2-A14X-01A 10 101 Out-of-frame Intra-chr q22.3 q24.3 Seq+ 86740 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKACB-ASH2L PRKACB chr1 84078371 + ASH2L chr8 38133454 + Exonic hg38 BRCA TCGA-E2-A14X-01A 1 2 Out-of-frame Inter-chr p31.1 p11.23 86741 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMB3-CWC25 PSMB3 chr17 38755990 + CWC25 chr17 38815097 - Exonic hg38 BRCA TCGA-E2-A14Y-01A 12 89 3'UTR-5'UTR Intra-chr q12 Seq+ 86742 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED1-RHBDL3 MED1 chr17 39447798 - RHBDL3 chr17 32288792 + Exonic hg38 BRCA TCGA-E2-A14Y-01A 5 7 In-Frame Intra-chr q12 Tumor suppressor gene q11.2 Seq+ 86743 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2K3-NKAIN3 MAP2K3 chr17 21284969 + NKAIN3 chr8 62579539 + Exonic hg38 BRCA TCGA-E2-A14Y-01A 2 16 Out-of-frame Inter-chr p11.2 STE:STE7 q12.3 Seq+ 86744 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4B-UBA52 KDM4B chr19 5082504 + UBA52 chr19 18573293 + Exonic hg38 BRCA TCGA-E2-A14Z-01A 7 24 Out-of-frame Intra-chr p13.3 p13.11 Seq+ 86745 ChimerSeq TCGA FAWG TCGA_RNA-Seq BPTF-NPEPPS BPTF chr17 67854762 + NPEPPS chr17 47621768 + Exonic hg38 BRCA TCGA-E2-A14Z-01A 5 10 Out-of-frame Intra-chr q24.2 Transcription factor q21.32 Seq+ 86746 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF2-DIRC3 ATF2 chr2 175151060 - DIRC3 chr2 217328152 - Exonic hg38 BRCA TCGA-E2-A14Z-01A 2 12 3'UTR-3'UTR Intra-chr q31.1 Transcription factor q35 Seq+ 86747 ChimerSeq TCGA FAWG TCGA_RNA-Seq NBEAL1-TANK NBEAL1 chr2 203110282 + TANK chr2 161223915 + Exonic hg38 BRCA TCGA-E2-A14Z-01A 1 14 In-Frame Intra-chr q33.2 q24.2 Tumor suppressor gene Seq+ 86748 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNPC3-KIAA0825 RNPC3 chr1 103526262 + KIAA0825 chr5 94417380 - Exonic hg38 BRCA TCGA-E2-A14Z-01A 3 5 CDS-3'UTR Inter-chr p21.1 q15 Seq+ 86749 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK39-ITGB6 STK39 chr2 168065319 - ITGB6 chr2 160138199 - Exonic hg38 BRCA TCGA-E2-A14Z-01A 3 3 In-Frame Intra-chr q24.3 q24.2 Seq+ 86750 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPYD-EDIL3 DPYD chr1 97234852 - EDIL3 chr5 84180521 - Exonic hg38 BRCA TCGA-E2-A14Z-01A 1 5 Out-of-frame Inter-chr p21.3 Oncogene q14.3 Seq+ 86751 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTN4-FTO ACTN4 chr19 38647907 + FTO chr16 53810140 + Exonic hg38 BRCA TCGA-E2-A150-01A 80 331 3'UTR-CDS Inter-chr q12.2 Seq+ 86752 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPDZ-LURAP1L MPDZ chr9 13247635 - LURAP1L chr9 12821386 + Exonic hg38 BRCA TCGA-E2-A150-01A 13 66 In-Frame Intra-chr p23 p23 Seq+ 86753 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSTN-CCT6A DSTN chr20 17570211 + CCT6A chr7 56052422 + Exonic hg38 BRCA TCGA-E2-A150-01A 20 24 Out-of-frame Inter-chr p12.1 p11.2 Seq+ 86754 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG13-FOLH1 ATG13 chr11 46632459 + FOLH1 chr11 49175957 - Exonic hg38 BRCA TCGA-E2-A150-01A 1 43 5'UTR-5'UTR Intra-chr p11.2 p11.12 86755 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP5-ZNF507 LRP5 chr11 68429700 + ZNF507 chr19 32382467 + Exonic hg38 BRCA TCGA-E2-A150-01A 2 13 Out-of-frame Inter-chr q13.2 q13.11 Transcription factor Seq+ 86756 ChimerSeq TCGA FAWG TCGA_RNA-Seq BOK-ING5 BOK chr2 241558993 + ING5 chr2 241704653 + Exonic hg38 BRCA TCGA-E2-A150-01A 2 9 5'UTR-CDS Intra-chr q37.3 q37.3 Tumor suppressor gene Seq+ 86757 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPT1A-LPCAT2 CPT1A chr11 68761535 - LPCAT2 chr16 55549277 + Exonic hg38 BRCA TCGA-E2-A150-01A 2 9 Out-of-frame Inter-chr q13.3 q12.2 Seq+ 86758 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC129-DEFB118 CCDC129 chr7 31578434 + DEFB118 chr20 31372857 + Exonic hg38 BRCA TCGA-E2-A150-01A 1 4 Out-of-frame Inter-chr p14.3 q11.21 Seq+ 86759 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD3-SRCIN1 PSMD3 chr17 39981190 + SRCIN1 chr17 38559772 - Exonic hg38 BRCA TCGA-E2-A152-01A 21 7 CDS-5'UTR Intra-chr q21.1 q12 Seq+ 86760 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF4-CDK12 ATF4 chr22 39520751 + CDK12 chr17 39544249 + Exonic hg38 BRCA TCGA-E2-A152-01A 1 4 5'UTR-3'UTR Inter-chr q13.1 Transcription factor q12 Oncogene 86761 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBY1-GTPBP1 CBY1 chr22 38656750 + GTPBP1 chr22 38708845 + Exonic hg38 BRCA TCGA-E2-A152-01A 1000 1000 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 86762 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBOAT1-HBS1L MBOAT1 chr6 20212136 - HBS1L chr6 135050647 - Exonic hg38 BRCA TCGA-E2-A155-01A 12 81 Out-of-frame Intra-chr p22.3 q23.3 Seq+ 86763 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN1-PTPRK ATXN1 chr6 16753233 - PTPRK chr6 128089992 - Exonic hg38 BRCA TCGA-E2-A155-01A 10 69 5'UTR-5'UTR Intra-chr p22.3 Tumor suppressor gene Seq+ 86764 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARRB1-ANKFN1 ARRB1 chr11 75351588 - ANKFN1 chr17 56184749 + Exonic hg38 BRCA TCGA-E2-A155-01A 9 18 CDS-5'UTR Inter-chr q13.4 q22 Seq+ 86765 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMTM8-RAF1 CMTM8 chr3 32239119 + RAF1 chr3 12618747 - Exonic hg38 BRCA TCGA-E2-A155-01A 9 9 CDS-5'UTR Intra-chr p22.3 p25.2 TKL:RAF Oncogene Seq+ 86766 ChimerSeq TCGA FAWG TCGA_RNA-Seq SESN1-AIM1 SESN1 chr6 109093795 - AIM1 chr6 106451694 + Exonic hg38 BRCA TCGA-E2-A155-01A 4 10 Out-of-frame Intra-chr q21 Seq+ 86767 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF322-PPIL6 ZNF322 chr6 26658558 - PPIL6 chr6 109392937 - Exonic hg38 BRCA TCGA-E2-A155-01A 1 21 5'UTR-CDS Intra-chr p22.2 Transcription factor q21 Seq+ 86768 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP5Z1-SGCA AP5Z1 chr7 4787652 + SGCA chr17 50170166 + Exonic hg38 BRCA TCGA-E2-A156-01A 3 9 Out-of-frame Inter-chr p22.1 q21.33 Seq+ 86769 ChimerSeq TCGA FAWG TCGA_RNA-Seq AEBP2-PVT1 AEBP2 chr12 19404124 + PVT1 chr8 127939508 + Exonic hg38 BRCA TCGA-E2-A158-01A 8 71 5'UTR-5'UTR Inter-chr p12.3 Transcription factor q24.21 Seq+ 86770 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-POU5F1B PVT1 chr8 127939676 + POU5F1B chr8 127414888 + Exonic hg38 BRCA TCGA-E2-A158-01A 4 80 5'UTR-5'UTR Intra-chr q24.21 q24.21 Transcription factor Seq+ 86771 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-AEBP2 PVT1 chr8 127794734 + AEBP2 chr12 19500097 + Exonic hg38 BRCA TCGA-E2-A158-01A 5 37 5'UTR-CDS Inter-chr q24.21 p12.3 Transcription factor Seq+ 86772 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF4G3-PPP2R3A EIF4G3 chr1 21176722 - PPP2R3A chr3 136087883 + Exonic hg38 BRCA TCGA-E2-A158-01A 3 19 5'UTR-CDS Inter-chr p36.12 q22.2 Seq+ 86773 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC8A-GON4L LRRC8A chr9 128886121 + GON4L chr1 155805141 - Exonic hg38 BRCA TCGA-E2-A158-01A 2 18 5'UTR-CDS Inter-chr q34.11 q22 Seq+ 86774 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH1L-TBC1D13 ASH1L chr1 155562153 - TBC1D13 chr9 128788334 + Exonic hg38 BRCA TCGA-E2-A158-01A 4 6 5'UTR-CDS Inter-chr q22 Transcription factor q34.11 Seq+ 86775 ChimerSeq TCGA FAWG TCGA_RNA-Seq HLCS-CD53 HLCS chr21 36936449 - CD53 chr1 110891392 + Exonic hg38 BRCA TCGA-E2-A158-01A 2 3 CDS-5'UTR Inter-chr q22.13 p13.3 Seq+ 86776 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF20-NDUFA6 TCF20 chr22 42343479 - NDUFA6 chr22 42087175 - Exonic hg38 BRCA TCGA-E2-A158-01A 1 3 5'UTR-5'UTR Intra-chr Transcription factor 86777 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNAQ-C9orf64 GNAQ chr9 77794463 - C9orf64 chr9 83944989 - Exonic hg38 BRCA TCGA-E2-A159-01A 24 34 In-Frame Intra-chr q21.2 Oncogene q21.32 Seq+ 86778 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLF9-ACTL7B KLF9 chr9 70385548 - ACTL7B chr9 108854888 - Exonic hg38 BRCA TCGA-E2-A159-01A 6 24 Out-of-frame Intra-chr q21.12 Transcription factor q31.3 Seq+ 86779 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPH7-PTPA DPH7 chr9 137574208 - PTPA chr9 129123052 + Exonic hg38 BRCA TCGA-E2-A159-01A 7 17 Out-of-frame Intra-chr q34.3 q34.11 Tumor suppressor gene 86780 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRSAM1-DENND1A LRSAM1 chr9 127452084 + DENND1A chr9 123457897 - Exonic hg38 BRCA TCGA-E2-A159-01A 1 17 5'UTR-CDS Intra-chr q33.3 q33.3 Seq+ 86781 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF1B-MYO5B KIF1B chr1 10268263 + MYO5B chr18 50001411 - Exonic hg38 BRCA TCGA-E2-A159-01A 2 11 Out-of-frame Inter-chr p36.22 Tumor suppressor gene q21.1 Seq+ 86782 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABL1-BRD3 ABL1 chr9 130714455 + BRD3 chr9 134053590 - Exonic hg38 BRCA TCGA-E2-A159-01A 1 2 CDS-5'UTR Intra-chr q34.12 TK:Abl Oncogene q34.2 Atypical:BRD Oncogene 86783 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT6A-ADAM2 KAT6A chr8 42048378 - ADAM2 chr8 39769575 - Exonic hg38 BRCA TCGA-E2-A15A-01A 56 279 CDS-5'UTR Intra-chr p11.21 Oncogene Seq+ 86784 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD3-ANK1 NSD3 chr8 38347497 - ANK1 chr8 41758137 - Exonic hg38 BRCA TCGA-E2-A15A-01A 8 261 In-Frame Intra-chr p11.23 Tumor suppressor gene p11.21 86785 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYRK1A-KDM4B DYRK1A chr21 37367628 + KDM4B chr19 5039836 + Exonic hg38 BRCA TCGA-E2-A15A-01A 13 9 5'UTR-CDS Inter-chr q22.13 CMGC:DYRK p13.3 Seq+ 86786 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRICKLE3-CACNA1F PRICKLE3 chrX 49183734 - CACNA1F chrX 49209393 - Exonic hg38 BRCA TCGA-E2-A15A-01A 6 31 In-Frame Intra-chr p11.23 p11.23 Seq+ 86787 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH2L-MGME1 ASH2L chr8 38114287 + MGME1 chr20 17988166 + Exonic hg38 BRCA TCGA-E2-A15A-01A 5 34 Out-of-frame Inter-chr p11.23 p11.23 Seq+ 86788 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6R3-FADD PPP6R3 chr11 68460827 + FADD chr11 70206133 + Exonic hg38 BRCA TCGA-E2-A15A-01A 3 39 5'UTR-CDS Intra-chr q13.2 q13.3 Tumor suppressor gene Seq+ 86789 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP1A1-VANGL1 ATP1A1 chr1 116373523 + VANGL1 chr1 115663661 + Exonic hg38 BRCA TCGA-E2-A15A-01A 6 20 In-Frame Intra-chr p13.1 p13.1 Seq+ 86790 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT11-FKBP3 GALNT11 chr7 152027718 + FKBP3 chr14 45130800 - Exonic hg38 BRCA TCGA-E2-A15A-01A 2 11 5'UTR-CDS Inter-chr q36.1 q21.2 Seq+ 86791 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALG8-OXA1L ALG8 chr11 78101093 - OXA1L chr14 22767958 + Exonic hg38 BRCA TCGA-E2-A15A-01A 3 6 In-Frame Inter-chr q14.1 q11.2 Seq+ 86792 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM168A-UVRAG FAM168A chr11 73597923 - UVRAG chr11 75861746 + Exonic hg38 BRCA TCGA-E2-A15A-01A 3 5 5'UTR-CDS Intra-chr q13.4 q13.5 Tumor suppressor gene Seq+ 86793 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWP1-ATP6V0D2 WWP1 chr8 86369031 + ATP6V0D2 chr8 86139457 + Exonic hg38 BRCA TCGA-E2-A15A-01A 1 12 5'UTR-CDS Intra-chr q21.3 q21.3 86794 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13L-DGKH MED13L chr12 116003003 - DGKH chr13 42208959 + Exonic hg38 BRCA TCGA-E2-A15A-01A 1 8 Out-of-frame Inter-chr q24.21 q14.11 Seq+ 86795 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGKH-MED13L DGKH chr13 42221394 + MED13L chr12 116022601 - Exonic hg38 BRCA TCGA-E2-A15A-01A 1 7 Out-of-frame Inter-chr q14.11 q24.21 Seq+ 86796 ChimerSeq TCGA FAWG TCGA_RNA-Seq STMN3-PTK6 STMN3 chr20 63657350 - PTK6 chr20 63530927 - Exonic hg38 BRCA TCGA-E2-A15A-01A 1 7 5'UTR-CDS Intra-chr q13.33 q13.33 86797 ChimerSeq TCGA FAWG TCGA_RNA-Seq FKBP3-NUB1 FKBP3 chr14 45129794 - NUB1 chr7 151366939 + Exonic hg38 BRCA TCGA-E2-A15A-01A 2 2 Out-of-frame Inter-chr q21.2 q36.1 Seq+ 86798 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC9-CFAP70 DNAJC9 chr10 73241662 - CFAP70 chr10 73256416 - Exonic hg38 BRCA TCGA-E2-A15A-01A 1 1 3'UTR-CDS Intra-chr q22.2 q22.2 86799 ChimerSeq TCGA FAWG TCGA_RNA-Seq APIP-C10orf35 APIP chr11 34916228 - C10orf35 chr10 69631480 + Exonic hg38 BRCA TCGA-E2-A15D-01A 3 17 Out-of-frame Inter-chr p13 q22.1 Seq+ 86800 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRIK2-ARMC2 GRIK2 chr6 101399392 + ARMC2 chr6 108953033 + Exonic hg38 BRCA TCGA-E2-A15D-01A 2 8 Out-of-frame Intra-chr q16.3 q21 Seq+ 86801 ChimerSeq TCGA FAWG TCGA_RNA-Seq H2AFY-CNOT6 H2AFY chr5 135352946 - CNOT6 chr5 180564489 + Exonic hg38 BRCA TCGA-E2-A15E-01A 7 28 In-Frame Intra-chr q31.1 q35.3 Seq+ 86802 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUFU-GBF1 SUFU chr10 102550106 + GBF1 chr10 102351256 + Exonic hg38 BRCA TCGA-E2-A15E-01A 7 8 In-Frame Intra-chr q24.32 Oncogene Tumor suppressor gene q24.32 Seq+ 86803 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRR12-PRRG2 PRR12 chr19 49621622 + PRRG2 chr19 49588497 + Exonic hg38 BRCA TCGA-E2-A15E-01A 3 4 Out-of-frame Intra-chr q13.33 Transcription factor q13.33 Seq+ 86804 ChimerSeq TCGA FAWG TCGA_RNA-Seq LETM1-POLN LETM1 chr4 1841347 - POLN chr4 2081743 - Exonic hg38 BRCA TCGA-E2-A15E-01A 1 4 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 86805 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDOA-COL1A1 ALDOA chr16 30068700 + COL1A1 chr17 50194447 - Exonic hg38 BRCA TCGA-E2-A15E-01A 1 2 Out-of-frame Inter-chr p11.2 q21.33 Oncogene Seq+ 86806 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN1-PREX1 PTPN1 chr20 50574654 + PREX1 chr20 48745147 - Exonic hg38 BRCA TCGA-E2-A15E-01A 1 2 In-Frame Intra-chr q13.13 Tumor suppressor gene q13.13 Seq+ 86807 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRT-NCOA3 PTPRT chr20 42315723 - NCOA3 chr20 47583183 + Exonic hg38 BRCA TCGA-E2-A15F-01A 85 138 CDS-5'UTR Intra-chr q13.11 Oncogene Tumor suppressor gene q13.12 Transcription factor Seq+ 86808 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD3-PLAT NSD3 chr8 38381799 - PLAT chr8 42193211 - Exonic hg38 BRCA TCGA-E2-A15F-01A 4 22 5'UTR-5'UTR Intra-chr p11.23 Tumor suppressor gene p11.21 86809 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOP1-PTPRT TOP1 chr20 41029455 + PTPRT chr20 42282525 - Exonic hg38 BRCA TCGA-E2-A15F-01A 4 9 Out-of-frame Intra-chr q12 Oncogene q13.11 Oncogene Tumor suppressor gene Seq+ 86810 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNRG-CSH2 SYNRG chr17 37553115 - CSH2 chr17 63873339 - Exonic hg38 BRCA TCGA-E2-A15H-01A 25 127 5'UTR-CDS Intra-chr q23.3 Seq+ 86811 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHMP5-VMP1 CHMP5 chr9 33266114 + VMP1 chr17 59808796 + Exonic hg38 BRCA TCGA-E2-A15H-01A 28 56 In-Frame Inter-chr p13.3 q23.1 Seq+ 86812 ChimerSeq TCGA FAWG TCGA_RNA-Seq COIL-CDR2L COIL chr17 56960775 - CDR2L chr17 74999504 + Exonic hg38 BRCA TCGA-E2-A15H-01A 20 66 Out-of-frame Intra-chr q22 q25.1 Seq+ 86813 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF12-OR2AM1P PHF12 chr17 28921688 - OR2AM1P chr9 36021920 + Exonic hg38 BRCA TCGA-E2-A15H-01A 11 40 Out-of-frame Inter-chr q11.2 p13.3 Seq+ 86814 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC9-COL22A1 TRAPPC9 chr8 140360050 - COL22A1 chr8 138755829 - Exonic hg38 BRCA TCGA-E2-A15H-01A 6 48 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 86815 ChimerSeq TCGA FAWG TCGA_RNA-Seq BPTF-CCDC40 BPTF chr17 67932019 + CCDC40 chr17 80047279 + Exonic hg38 BRCA TCGA-E2-A15H-01A 4 29 Out-of-frame Intra-chr q24.2 Transcription factor q25.3 Seq+ 86816 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP1-GGA3 AKAP1 chr17 57085398 + GGA3 chr17 75246796 - Exonic hg38 BRCA TCGA-E2-A15H-01A 6 18 5'UTR-5'UTR Intra-chr q22 q25.1 Seq+ 86817 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC6-RNFT1 CDC6 chr17 40301030 + RNFT1 chr17 59963284 - Exonic hg38 BRCA TCGA-E2-A15H-01A 5 19 3'UTR-CDS Intra-chr q21.2 q23.1 Seq+ 86818 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP1-C17orf67 AKAP1 chr17 57107178 + C17orf67 chr17 56816058 - Exonic hg38 BRCA TCGA-E2-A15H-01A 4 18 CDS-5'UTR Intra-chr q22 q22 Seq+ 86819 ChimerSeq TCGA FAWG TCGA_RNA-Seq APTX-GNE APTX chr9 33001567 - GNE chr9 36220020 - Exonic hg38 BRCA TCGA-E2-A15H-01A 4 12 5'UTR-CDS Intra-chr p21.1 p13.3 Seq+ 86820 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSI2-WIPF2 MSI2 chr17 57401471 + WIPF2 chr17 40256391 + Exonic hg38 BRCA TCGA-E2-A15H-01A 2 10 CDS-5'UTR Intra-chr q22 q21.2 Seq+ 86821 ChimerSeq TCGA FAWG TCGA_RNA-Seq FDFT1-INTS9 FDFT1 chr8 11802931 + INTS9 chr8 28850273 - Exonic hg38 BRCA TCGA-E2-A15K-01A 5 16 5'UTR-CDS Intra-chr p23.1 p21.1 Seq+ 86822 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS9-PHYHIP INTS9 chr8 28835292 - PHYHIP chr8 22232003 - Exonic hg38 BRCA TCGA-E2-A15K-01A 3 9 CDS-5'UTR Intra-chr p21.1 p21.3 Seq+ 86823 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPATA5-CENPE SPATA5 chr4 122979386 + CENPE chr4 103177046 - Exonic hg38 BRCA TCGA-E2-A15K-01A 1 4 In-Frame Intra-chr q28.1 q24 Seq+ 86824 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPAB-F12 HNRNPAB chr5 178211026 + F12 chr5 177404970 - Exonic hg38 BRCA TCGA-E2-A15M-01A 15 50 Out-of-frame Intra-chr q35.3 q35.3 Seq+ 86825 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSPRY1-VN1R35P RSPRY1 chr16 57221415 + VN1R35P chr7 63963735 - Exonic hg38 BRCA TCGA-E2-A15M-01A 6 32 Out-of-frame Inter-chr q13 q11.21 86826 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-MSL1 FBXL20 chr17 39297127 - MSL1 chr17 40134279 + Exonic hg38 BRCA TCGA-E2-A15M-01A 4 17 In-Frame Intra-chr q12 q21.1 Seq+ 86827 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX30-DENND1A SNX30 chr9 112817815 + DENND1A chr9 123457897 - Exonic hg38 BRCA TCGA-E2-A15M-01A 4 7 In-Frame Intra-chr q32 q33.3 Seq+ 86828 ChimerSeq TCGA FAWG TCGA_RNA-Seq LGALS8-TRIM67 LGALS8 chr1 236526115 + TRIM67 chr1 231197371 + Exonic hg38 BRCA TCGA-E2-A15M-01A 1 17 In-Frame Intra-chr q43 q42.2 Seq+ 86829 ChimerSeq TCGA FAWG TCGA_RNA-Seq BBX-WBSCR17 BBX chr3 107798720 + WBSCR17 chr7 71335550 + Exonic hg38 BRCA TCGA-E2-A15M-01A 2 1 Out-of-frame Inter-chr q13.12 Transcription factor q11.22 Seq+ 86830 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-SYNRG FBXL20 chr17 39297127 - SYNRG chr17 37554059 - Exonic hg38 BRCA TCGA-E2-A15M-01A 1 3 CDS-5'UTR Intra-chr q12 Seq+ 86831 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL21-SSH3 MRPL21 chr11 68896515 - SSH3 chr11 67306838 + Exonic hg38 BRCA TCGA-E2-A15O-01A 33 131 In-Frame Intra-chr q13.3 q13.2 Seq+ 86832 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC23A-PSMC1 SEC23A chr14 39095898 - PSMC1 chr14 90272273 + Exonic hg38 BRCA TCGA-E2-A15P-01A 42 27 Out-of-frame Intra-chr q21.1 q32.11 Seq+ 86833 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB7A-MLLT1 ZBTB7A chr19 4055012 - MLLT1 chr19 6270759 - Exonic hg38 BRCA TCGA-E2-A15P-01A 8 62 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 86834 ChimerSeq TCGA FAWG TCGA_RNA-Seq PATJ-GLIS1 PATJ chr1 62017947 + GLIS1 chr1 53600278 - Exonic hg38 BRCA TCGA-E2-A15P-01A 4 17 Out-of-frame Intra-chr p31.3 p32.3 Transcription factor 86835 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAP1-C14orf132 SMAP1 chr6 70732511 + C14orf132 chr14 96086511 + Exonic hg38 BRCA TCGA-E2-A15P-01A 2 9 In-Frame Inter-chr q13 q32.2 Seq+ 86836 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF839-MYH14 ZNF839 chr14 102320053 + MYH14 chr19 50266877 + Exonic hg38 BRCA TCGA-E2-A15P-01A 1 2 In-Frame Inter-chr q32.31 q13.33 86837 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPT1A-ADAM2 CPT1A chr11 68773265 - ADAM2 chr8 39749744 - Exonic hg38 BRCA TCGA-E2-A15R-01A 23 106 CDS-5'UTR Inter-chr q13.3 Seq+ 86838 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM86C2P-PC FAM86C2P chr11 67805218 - PC chr11 66952468 - Exonic hg38 BRCA TCGA-E2-A15R-01A 10 83 3'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 86839 ChimerSeq TCGA FAWG TCGA_RNA-Seq SESTD1-ACMSD SESTD1 chr2 179264499 - ACMSD chr2 134898341 + Exonic hg38 BRCA TCGA-E2-A15S-01A 4 13 5'UTR-CDS Intra-chr q31.2 q21.3 Seq+ 86840 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN15-VPS26A TSPAN15 chr10 69451690 + VPS26A chr10 69155812 + Exonic hg38 BRCA TCGA-E2-A15S-01A 4 3 In-Frame Intra-chr q22.1 q22.1 Seq+ 86841 ChimerSeq TCGA FAWG TCGA_RNA-Seq DUS2-UNC5C DUS2 chr16 68038149 + UNC5C chr4 95250667 - Exonic hg38 BRCA TCGA-E2-A15T-01A 4 15 In-Frame Inter-chr q22.1 q22.3 Tumor suppressor gene 86842 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC6-EXT1 LRRC6 chr8 132675318 - EXT1 chr8 117837201 - Exonic hg38 BRCA TCGA-E2-A15T-01A 1 18 5'UTR-CDS Intra-chr q24.22 q24.11 Oncogene Tumor suppressor gene Seq+ 86843 ChimerSeq TCGA FAWG TCGA_RNA-Seq TET3-ACTG2 TET3 chr2 74003166 + ACTG2 chr2 73901276 + Exonic hg38 BRCA TCGA-E2-A1AZ-01A 8 76 CDS-5'UTR Intra-chr p13.1 Transcription factor p13.1 Seq+ 86844 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS8-C1orf228 RPS8 chr1 44778129 + C1orf228 chr1 44724122 + Exonic hg38 BRCA TCGA-E2-A1AZ-01A 7 27 Out-of-frame Intra-chr p34.1 p34.1 Seq+ 86845 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRC-MANBAL SRC chr20 37346255 + MANBAL chr20 37301208 + Exonic hg38 BRCA TCGA-E2-A1AZ-01A 4 3 5'UTR-5'UTR Intra-chr q11.23 TK:Src Oncogene q11.23 Seq+ 86846 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNCAIP-SRFBP1 SNCAIP chr5 122312284 + SRFBP1 chr5 122075315 + Exonic hg38 BRCA TCGA-E2-A1AZ-01A 2 5 5'UTR-3'UTR Intra-chr q23.2 q23.1 86847 ChimerSeq TCGA FAWG TCGA_RNA-Seq WASHC2A-ASAH2 WASHC2A chr10 50127795 + ASAH2 chr10 50206097 - Exonic hg38 BRCA TCGA-E2-A1AZ-01A 2 2 Out-of-frame Intra-chr q11.23 q11.23 86848 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF4E2-DIS3L2 EIF4E2 chr2 232564351 + DIS3L2 chr2 232329813 + Exonic hg38 BRCA TCGA-E2-A1AZ-01A 1 5 Out-of-frame Intra-chr q37.1 q37.1 Seq+ 86849 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHKA-KMT5B CHKA chr11 68081404 - KMT5B chr11 68175183 - Exonic hg38 BRCA TCGA-E2-A1AZ-01A 1 3 5'UTR-5'UTR Intra-chr q13.2 q13.2 86850 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2AK2-CEBPZ EIF2AK2 chr2 37119959 - CEBPZ chr2 37217037 - Exonic hg38 BRCA TCGA-E2-A1AZ-01A 1 1 In-Frame Intra-chr p22.2 p22.2 Transcription factor Seq+ 86851 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPS1-FAM84B TRPS1 chr8 115668545 - FAM84B chr8 126553503 - Exonic hg38 BRCA TCGA-E2-A1B0-01A 6 25 Out-of-frame Intra-chr q23.3 Transcription factor q24.21 Seq+ 86852 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT9-TANC2 SEPT9 chr17 77281554 + TANC2 chr17 63379718 + Exonic hg38 BRCA TCGA-E2-A1B0-01A 5 13 Out-of-frame Intra-chr q23.2 Seq+ 86853 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF170-HOOK3 RNF170 chr8 42887728 - HOOK3 chr8 42906173 + Exonic hg38 BRCA TCGA-E2-A1B0-01A 6 7 Out-of-frame Intra-chr p11.21 p11.21 Oncogene Seq+ 86854 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS28-AZIN1 MRPS28 chr8 80002999 - AZIN1 chr8 102887147 - Exonic hg38 BRCA TCGA-E2-A1B0-01A 3 5 CDS-5'UTR Intra-chr q21.13 q22.3 86855 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPE-SMIM14 CPE chr4 165379528 + SMIM14 chr4 39572463 - Exonic hg38 BRCA TCGA-E2-A1B0-01A 2 6 Out-of-frame Intra-chr q32.3 p14 Seq+ 86856 ChimerSeq TCGA FAWG TCGA_RNA-Seq AATF-ACACA AATF chr17 37021014 + ACACA chr17 37097984 - Exonic hg38 BRCA TCGA-E2-A1B0-01A 1 6 3'UTR-5'UTR Intra-chr 86857 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCALD-SYBU NCALD chr8 101719252 - SYBU chr8 109619039 - Exonic hg38 BRCA TCGA-E2-A1B0-01A 1 5 Out-of-frame Intra-chr q22.3 q23.2 86858 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSME3-GPR37L1 PSME3 chr17 42839380 + GPR37L1 chr1 202127741 + Exonic hg38 BRCA TCGA-E2-A1B1-01A 1 27 In-Frame Inter-chr q21.31 q32.1 86859 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGU-PTPRT PIGU chr20 34575104 - PTPRT chr20 42282525 - Exonic hg38 BRCA TCGA-E2-A1B1-01A 2 10 In-Frame Intra-chr q11.22 q13.11 Oncogene Tumor suppressor gene Seq+ 86860 ChimerSeq TCGA FAWG TCGA_RNA-Seq NR2C1-CCNG2P1 NR2C1 chr12 95067331 - CCNG2P1 chr12 75257834 - Exonic hg38 BRCA TCGA-E2-A1B5-01A 4 7 Out-of-frame Intra-chr q22 Transcription factor q21.1 86861 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOPEY2-SH3BGR DOPEY2 chr21 36239955 + SH3BGR chr21 39475135 + Exonic hg38 BRCA TCGA-E2-A1B5-01A 2 10 Out-of-frame Intra-chr q22.12 q22.2 Seq+ 86862 ChimerSeq TCGA FAWG TCGA_RNA-Seq BOC-PHLDB2 BOC chr3 113284567 + PHLDB2 chr3 111932269 + Exonic hg38 BRCA TCGA-E2-A1B6-01A 2 26 In-Frame Intra-chr q13.2 q13.2 Seq+ 86863 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSR3-VEPH1 SSR3 chr3 156553655 - VEPH1 chr3 157470529 - Exonic hg38 BRCA TCGA-E2-A1B6-01A 4 9 Out-of-frame Intra-chr q25.31 q25.32 Seq+ 86864 ChimerSeq TCGA FAWG TCGA_RNA-Seq H6PD-HIVEP3 H6PD chr1 9247083 + HIVEP3 chr1 41700995 - Exonic hg38 BRCA TCGA-E2-A1B6-01A 2 8 CDS-5'UTR Intra-chr p36.22 p34.2 Tumor suppressor gene Transcription factor Seq+ 86865 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBFB-TIGD7 CBFB chr16 67082308 + TIGD7 chr16 3302009 - Exonic hg38 BRCA TCGA-E2-A1B6-01A 1 3 CDS-5'UTR Intra-chr q22.1 p13.3 Transcription factor 86866 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLX4IP-SUGT1 SLX4IP chr20 10458231 + SUGT1 chr13 52687734 + Exonic hg38 BRCA TCGA-E2-A1B6-01A 1 1 In-Frame Inter-chr p12.2 q14.3 86867 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHKA-UBE2QL1 CHKA chr11 68120828 - UBE2QL1 chr5 6492028 + Exonic hg38 BRCA TCGA-E2-A1BC-01A 17 23 CDS-3'UTR Inter-chr q13.2 p15.31 Tumor suppressor gene Seq+ 86868 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRYL-CNGA1 FRYL chr4 48608987 - CNGA1 chr4 47943412 - Exonic hg38 BRCA TCGA-E2-A1BC-01A 1 4 In-Frame Intra-chr p11 p12 86869 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF169-UBR7 ZNF169 chr9 94278845 + UBR7 chr14 93209824 + Exonic hg38 BRCA TCGA-E2-A1BD-01A 2 18 CDS-3'UTR Inter-chr q22.32 Transcription factor Seq+ 86870 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCCA-CLYBL PCCA chr13 100235878 + CLYBL chr13 99772824 + Exonic hg38 BRCA TCGA-E2-A1IE-01A 3 9 Out-of-frame Intra-chr q32.3 q32.3 Seq+ 86871 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-RAB11FIP4 NF1 chr17 31265339 + RAB11FIP4 chr17 31517651 + Exonic hg38 BRCA TCGA-E2-A1IG-01A 1 2 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 86872 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANK1-ADAM7 ANK1 chr8 41733971 - ADAM7 chr8 24526755 + Exonic hg38 BRCA TCGA-E2-A1IH-01A 16 26 CDS-3'UTR Intra-chr p11.21 p21.2 Seq+ 86873 ChimerSeq TCGA FAWG TCGA_RNA-Seq YME1L1-SLC35D2 YME1L1 chr10 27148906 - SLC35D2 chr9 96360221 - Exonic hg38 BRCA TCGA-E2-A1IH-01A 6 33 In-Frame Inter-chr p12.1 q22.32 Seq+ 86874 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF10-DEFA6 ARHGEF10 chr8 1869250 + DEFA6 chr8 6926046 - Exonic hg38 BRCA TCGA-E2-A1IH-01A 4 12 3'UTR-5'UTR Intra-chr p23.1 Seq+ 86875 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSTK-YME1L1 PSTK chr10 122990407 + YME1L1 chr10 27131941 - Exonic hg38 BRCA TCGA-E2-A1IH-01A 3 2 3'UTR-CDS Intra-chr q26.13 p12.1 86876 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP34-WDR92 USP34 chr2 61470650 - WDR92 chr2 68147567 - Exonic hg38 BRCA TCGA-E2-A1II-01A 8 22 Out-of-frame Intra-chr p15 p14 Seq+ 86877 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRD4-CSE1L BRD4 chr19 15332290 - CSE1L chr20 49072568 + Exonic hg38 BRCA TCGA-E2-A1II-01A 10 4 5'UTR-5'UTR Inter-chr p13.12 Atypical:BRD q13.13 Seq+ 86878 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIAH2-SERP1 SIAH2 chr3 150762433 - SERP1 chr3 150567106 - Exonic hg38 BRCA TCGA-E2-A1II-01A 3 16 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 86879 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP11C-PREX1 ATP11C chrX 139932016 - PREX1 chr20 48692790 - Exonic hg38 BRCA TCGA-E2-A1II-01A 3 4 Out-of-frame Inter-chr q27.1 q13.13 Seq+ 86880 ChimerSeq TCGA FAWG TCGA_RNA-Seq QKI-TAF12 QKI chr6 163415335 + TAF12 chr1 28622165 - Exonic hg38 BRCA TCGA-E2-A1II-01A 1 6 CDS-5'UTR Inter-chr q26 p35.3 86881 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT2-PGBD5 GALNT2 chr1 230243413 + PGBD5 chr1 230351095 - Exonic hg38 BRCA TCGA-E2-A1II-01A 1000 1000 Out-of-frame Intra-chr q42.13 q42.13 Seq+ 86882 ChimerSeq TCGA FAWG TCGA_RNA-Seq METAP1-EIF4E METAP1 chr4 98995867 + EIF4E chr4 98901982 - Exonic hg38 BRCA TCGA-E2-A1IL-01A 2 1 In-Frame Intra-chr q23 q23 Seq+ 86883 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM53B-SGK2 FAM53B chr10 124681607 - SGK2 chr20 43569385 + Exonic hg38 BRCA TCGA-E2-A1IN-01A 1 3 In-Frame Inter-chr q26.13 q13.12 AGC:SGK Seq+ 86884 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHROOM3-GRSF1 SHROOM3 chr4 76586469 + GRSF1 chr4 70836314 - Exonic hg38 BRCA TCGA-E2-A1IO-01A 39 117 CDS-5'UTR Intra-chr q21.1 q13.3 Seq+ 86885 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRERF1-TMEM132C TRERF1 chr6 42451177 - TMEM132C chr12 128616152 + Exonic hg38 BRCA TCGA-E2-A1IO-01A 2 13 5'UTR-CDS Inter-chr p21.1 Transcription factor q24.32 Seq+ 86886 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP24-NOA1 ARHGAP24 chr4 85721972 + NOA1 chr4 56974022 - Exonic hg38 BRCA TCGA-E2-A1IO-01A 1 8 In-Frame Intra-chr q21.23 q12 86887 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLPX-PDCD7 CLPX chr15 65166642 - PDCD7 chr15 65133183 - Exonic hg38 BRCA TCGA-E2-A1IO-01A 1000 1000 Out-of-frame Intra-chr q22.31 q22.31 86888 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUMA1-PPP2R5B NUMA1 chr11 72069842 - PPP2R5B chr11 64926712 + Exonic hg38 BRCA TCGA-E2-A1IU-01A 14 117 5'UTR-CDS Intra-chr q13.4 Oncogene q13.1 Seq+ 86889 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHRDL2-COPB1 CHRDL2 chr11 74718720 - COPB1 chr11 14469563 - Exonic hg38 BRCA TCGA-E2-A1IU-01A 4 61 In-Frame Intra-chr q13.4 p15.2 Seq+ 86890 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG2A-MIR4300HG ATG2A chr11 64916965 - MIR4300HG chr11 82356628 - Exonic hg38 BRCA TCGA-E2-A1IU-01A 8 21 CDS-3'UTR Intra-chr q13.1 q14.1 86891 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R5B-KDM2A PPP2R5B chr11 64918349 + KDM2A chr11 67215340 + Exonic hg38 BRCA TCGA-E2-A1IU-01A 1 14 5'UTR-5'UTR Intra-chr q13.1 q13.2 Transcription factor Seq+ 86892 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNPO1-GTF2H1 TNPO1 chr5 72905445 + GTF2H1 chr11 18351881 + Exonic hg38 BRCA TCGA-E2-A1L7-01A 3 38 3'UTR-CDS Inter-chr q13.2 p15.1 Seq+ 86893 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBRM1-CACNA2D3 PBRM1 chr3 52603521 - CACNA2D3 chr3 54386715 + Exonic hg38 BRCA TCGA-E2-A1L7-01A 2 15 Out-of-frame Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 Tumor suppressor gene Seq+ 86894 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK3-PLXNB2 SHANK3 chr22 50722437 + PLXNB2 chr22 50294778 - Exonic hg38 BRCA TCGA-E2-A1L7-01A 1 8 3'UTR-5'UTR Intra-chr q13.33 Seq+ 86895 ChimerSeq TCGA FAWG TCGA_RNA-Seq C3orf70-TPRG1 C3orf70 chr3 185152628 - TPRG1 chr3 189127057 + Exonic hg38 BRCA TCGA-E2-A1L7-01A 1 4 CDS-5'UTR Intra-chr q27.2 q28 Seq+ 86896 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLA2G6-TMEM184B PLA2G6 chr22 38169218 - TMEM184B chr22 38226870 - Exonic hg38 BRCA TCGA-E2-A1L7-01A 1 4 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 86897 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO6-IAPP ANO6 chr12 45423062 + IAPP chr12 21378237 + Exonic hg38 BRCA TCGA-E2-A1L8-01A 56 162 Out-of-frame Intra-chr q12 p12.1 Seq+ 86898 ChimerSeq TCGA FAWG TCGA_RNA-Seq STYXL1-PRPF40B STYXL1 chr7 76013742 - PRPF40B chr12 49583562 + Exonic hg38 BRCA TCGA-E2-A1L8-01A 5 22 CDS-5'UTR Inter-chr q11.23 q13.12 Seq+ 86899 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDH2-PAWR MDH2 chr7 76060498 + PAWR chr12 79596658 - Exonic hg38 BRCA TCGA-E2-A1L8-01A 2 25 Out-of-frame Inter-chr q11.23 q21.2 Tumor suppressor gene Seq+ 86900 ChimerSeq TCGA FAWG TCGA_RNA-Seq NELL2-ATF7 NELL2 chr12 44921790 - ATF7 chr12 53552637 - Exonic hg38 BRCA TCGA-E2-A1L8-01A 1 12 5'UTR-CDS Intra-chr q12 q13.13 Transcription factor Seq+ 86901 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYL12B-ACAP1 MYL12B chr18 3262237 + ACAP1 chr17 7341948 + Exonic hg38 BRCA TCGA-E2-A1L9-01A 14 35 5'UTR-CDS Inter-chr p11.31 p13.1 Seq+ 86902 ChimerSeq TCGA FAWG TCGA_RNA-Seq UGCG-UBXN11 UGCG chr9 111914746 + UBXN11 chr1 26306704 - Exonic hg38 BRCA TCGA-E2-A1LA-01A 4 16 CDS-5'UTR Inter-chr q31.3 p36.11 Seq+ 86903 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAD3-SENP8 SMAD3 chr15 67066360 + SENP8 chr15 72139577 + Exonic hg38 BRCA TCGA-E2-A1LA-01A 4 7 CDS-5'UTR Intra-chr q22.33 Transcription factor q23 Seq+ 86904 ChimerSeq TCGA FAWG TCGA_RNA-Seq LUC7L3-IKZF3 LUC7L3 chr17 50719831 + IKZF3 chr17 39792933 - Exonic hg38 BRCA TCGA-E2-A1LB-01A 12 55 Out-of-frame Intra-chr q21.33 q21.1 Tumor suppressor gene Transcription factor Seq+ 86905 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1D-TMIGD1 MYO1D chr17 32876778 - TMIGD1 chr17 30329529 - Exonic hg38 BRCA TCGA-E2-A1LB-01A 7 52 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 86906 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNF8-PROCA1 SNF8 chr17 48943925 - PROCA1 chr17 28704843 - Exonic hg38 BRCA TCGA-E2-A1LB-01A 1 2 Out-of-frame Intra-chr q21.32 q11.2 86907 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF20-DYNLRB1 PHF20 chr20 35772079 + DYNLRB1 chr20 34526268 + Exonic hg38 BRCA TCGA-E2-A1LE-01A 107 78 5'UTR-5'UTR Intra-chr q11.22 Transcription factor q11.22 Seq+ 86908 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCP2-SRP19 DCP2 chr5 113008042 + SRP19 chr5 112867404 + Exonic hg38 BRCA TCGA-E2-A1LE-01A 7 149 In-Frame Intra-chr q22.2 q22.2 Seq+ 86909 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPH1-RNF130 HNRNPH1 chr5 179615546 - RNF130 chr5 179955669 - Exonic hg38 BRCA TCGA-E2-A1LE-01A 9 82 5'UTR-CDS Intra-chr q35.3 q35.3 Seq+ 86910 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF750-B3GNTL1 ZNF750 chr17 82839927 - B3GNTL1 chr17 82965746 - Exonic hg38 BRCA TCGA-E2-A1LE-01A 2 53 5'UTR-3'UTR Intra-chr q25.3 Transcription factor Seq+ 86911 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP39-ELMOD3 USP39 chr2 85621579 + ELMOD3 chr2 85377344 + Exonic hg38 BRCA TCGA-E2-A1LE-01A 5 25 In-Frame Intra-chr p11.2 p11.2 Seq+ 86912 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNHIT1-PPP1R1B ZNHIT1 chr7 101218217 + PPP1R1B chr17 39635607 + Exonic hg38 BRCA TCGA-E2-A1LE-01A 6 12 In-Frame Inter-chr q22.1 q12 Tumor suppressor gene Seq+ 86913 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD276-PARP16 CD276 chr15 73684460 + PARP16 chr15 65271072 - Exonic hg38 BRCA TCGA-E2-A1LE-01A 4 9 5'UTR-CDS Intra-chr q24.1 q22.31 Seq+ 86914 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUS7-EFCAB10 PUS7 chr7 105522052 - EFCAB10 chr7 105569571 - Exonic hg38 BRCA TCGA-E2-A1LE-01A 1 18 5'UTR-CDS Intra-chr q22.3 q22.3 86915 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCD4-VIL1 PLCD4 chr2 218622878 + VIL1 chr2 218449223 + Exonic hg38 BRCA TCGA-E2-A1LE-01A 4 5 Out-of-frame Intra-chr q35 q35 Tumor suppressor gene Seq+ 86916 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITSN2-NMT1 ITSN2 chr2 24246129 - NMT1 chr17 45093685 + Exonic hg38 BRCA TCGA-E2-A1LE-01A 3 5 In-Frame Inter-chr p23.3 q21.31 Seq+ 86917 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOMO1-MYH11 NOMO1 chr16 14889215 + MYH11 chr16 15823411 - Exonic hg38 BRCA TCGA-E2-A1LE-01A 1 13 5'UTR-5'UTR Intra-chr Oncogene Seq+ 86918 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFF4-FSTL4 AFF4 chr5 132889079 - FSTL4 chr5 133225819 - Exonic hg38 BRCA TCGA-E2-A1LE-01A 2 7 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 86919 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC32-WDR35 TTC32 chr2 19901706 - WDR35 chr2 19936365 - Exonic hg38 BRCA TCGA-E2-A1LE-01A 2 3 In-Frame Intra-chr p24.1 p24.1 86920 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFNA4-FLAD1 EFNA4 chr1 155067440 + FLAD1 chr1 154988105 + Exonic hg38 BRCA TCGA-E2-A1LE-01A 1 6 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 86921 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-ATAD5 NF1 chr17 31169997 + ATAD5 chr17 30865704 + Exonic hg38 BRCA TCGA-E2-A1LE-01A 1 6 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 86922 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRMU-TTC38 TRMU chr22 46331732 + TTC38 chr22 46272335 + Exonic hg38 BRCA TCGA-E2-A1LE-01A 1 6 5'UTR-CDS Intra-chr q13.31 q13.31 Seq+ 86923 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD5-C5 PSMD5 chr9 120824494 - C5 chr9 121027274 - Exonic hg38 BRCA TCGA-E2-A1LE-01A 1 3 Out-of-frame Intra-chr q33.2 q33.2 86924 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM39B-KHDRBS1 TMEM39B chr1 32077318 + KHDRBS1 chr1 32030298 + Exonic hg38 BRCA TCGA-E2-A1LE-01A 1 3 Out-of-frame Intra-chr p35.2 p35.2 86925 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWP1-CPB2 WWP1 chr8 86461846 + CPB2 chr13 46087820 - Exonic hg38 BRCA TCGA-E2-A1LG-01A 36 132 In-Frame Inter-chr q21.3 q14.13 Seq+ 86926 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC10-BRWD1 TRAPPC10 chr21 44012560 + BRWD1 chr21 39258672 - Exonic hg38 BRCA TCGA-E2-A1LG-01A 38 42 In-Frame Intra-chr q22.3 q22.2 Seq+ 86927 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSCR3-IGSF5 DSCR3 chr21 37267238 - IGSF5 chr21 39765535 + Exonic hg38 BRCA TCGA-E2-A1LG-01A 5 10 Out-of-frame Intra-chr q22.13 q22.2 Seq+ 86928 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEBPB-IGHJ5 CEBPB chr20 50191998 + IGHJ5 chr14 105863859 - Exonic hg38 BRCA TCGA-E2-A1LH-01A 7 0 Out-of-frame Inter-chr q13.13 Transcription factor 86929 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGKC-ARHGAP35 IGKC chr2 88857292 - ARHGAP35 chr19 47004006 + Exonic hg38 BRCA TCGA-E2-A1LH-01A 4 1 Out-of-frame Inter-chr p11.2 q13.32 Transcription factor 86930 ChimerSeq TCGA FAWG TCGA_RNA-Seq HM13-CPQ HM13 chr20 31514734 + CPQ chr8 96834973 + Exonic hg38 BRCA TCGA-E2-A1LH-01A 1 9 Out-of-frame Inter-chr q11.21 q22.1 86931 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUDCD1-TMEM184C NUDCD1 chr8 109322309 - TMEM184C chr4 147623834 + Exonic hg38 BRCA TCGA-E2-A1LH-01A 2 3 In-Frame Inter-chr q23.1 q31.23 Seq+ 86932 ChimerSeq TCGA FAWG TCGA_RNA-Seq YWHAE-OGFRP1 YWHAE chr17 1400047 - OGFRP1 chr22 42274988 + Exonic hg38 BRCA TCGA-E2-A1LH-01A 1 5 5'UTR-3'UTR Inter-chr p13.3 q13.2 86933 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF7L1-WIF1 TCF7L1 chr2 85134450 + WIF1 chr12 65077854 - Exonic hg38 BRCA TCGA-E2-A1LI-01A 49 177 In-Frame Inter-chr p11.2 Oncogene Transcription factor q14.3 Tumor suppressor gene Seq+ 86934 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCCC1-MED10 MCCC1 chr3 183070999 - MED10 chr5 6372601 - Exonic hg38 BRCA TCGA-E2-A1LI-01A 7 45 Out-of-frame Inter-chr q27.1 p15.31 Seq+ 86935 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP11B-MED10 ATP11B chr3 182820376 + MED10 chr5 6372601 - Exonic hg38 BRCA TCGA-E2-A1LI-01A 1 17 In-Frame Inter-chr q26.33 Oncogene p15.31 Seq+ 86936 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1B-NKAIN2 ARID1B chr6 156935576 + NKAIN2 chr6 124658186 + Exonic hg38 BRCA TCGA-E2-A1LK-01A 10 46 In-Frame Intra-chr q25.3 Oncogene q22.31 Seq+ 86937 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIN-ITIH5 KIN chr10 7783081 - ITIH5 chr10 7569784 - Exonic hg38 BRCA TCGA-E2-A1LK-01A 2 13 Out-of-frame Intra-chr p14 Transcription factor p14 Seq+ 86938 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC42BPA-EPRS CDC42BPA chr1 227016080 - EPRS chr1 220007338 - Exonic hg38 BRCA TCGA-E2-A1LK-01A 3 6 In-Frame Intra-chr q42.13 q41 Seq+ 86939 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETDB1-PKP4 SETDB1 chr1 150942688 + PKP4 chr2 158620990 + Exonic hg38 BRCA TCGA-E2-A1LK-01A 1 8 In-Frame Inter-chr q21.3 Transcription factor q24.1 Seq+ 86940 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADIPOR2-FOXJ2 ADIPOR2 chr12 1754514 + FOXJ2 chr12 8044760 + Exonic hg38 BRCA TCGA-E2-A1LL-01A 23 67 3'UTR-CDS Intra-chr p13.33 p13.31 Transcription factor Seq+ 86941 ChimerSeq TCGA FAWG TCGA_RNA-Seq LCOR-CPNE8 LCOR chr10 96833479 + CPNE8 chr12 38702921 - Exonic hg38 BRCA TCGA-E2-A1LL-01A 17 48 5'UTR-CDS Inter-chr q24.1 Transcription factor q12 Seq+ 86942 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCC9-RASSF8 ABCC9 chr12 21906126 - RASSF8 chr12 26020145 + Exonic hg38 BRCA TCGA-E2-A1LL-01A 6 53 CDS-5'UTR Intra-chr p12.1 p12.1 Tumor suppressor gene 86943 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASSF8-RERGL RASSF8 chr12 25959148 + RERGL chr12 18088956 - Exonic hg38 BRCA TCGA-E2-A1LL-01A 11 28 5'UTR-CDS Intra-chr p12.1 Tumor suppressor gene p12.3 Seq+ 86944 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPP5-RDH11 MPP5 chr14 67241533 + RDH11 chr14 67685204 - Exonic hg38 BRCA TCGA-E2-A1LL-01A 6 26 5'UTR-CDS Intra-chr q23.3 q24.1 Seq+ 86945 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAD3-MAP2K5 SMAD3 chr15 67125984 + MAP2K5 chr15 67563283 + Exonic hg38 BRCA TCGA-E2-A1LL-01A 9 14 5'UTR-CDS Intra-chr q22.33 Transcription factor q23 STE:STE7 Seq+ 86946 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTF2-FNBP1L MTF2 chr1 93079531 + FNBP1L chr1 93522082 + Exonic hg38 BRCA TCGA-E2-A1LL-01A 5 20 In-Frame Intra-chr p22.1 Transcription factor p22.1 Seq+ 86947 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGD4-ABCC9 FGD4 chr12 32564289 + ABCC9 chr12 21887934 - Exonic hg38 BRCA TCGA-E2-A1LL-01A 5 18 Out-of-frame Intra-chr p11.21 p12.1 Seq+ 86948 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEAD4-C2CD5 TEAD4 chr12 2960040 + C2CD5 chr12 22493337 - Exonic hg38 BRCA TCGA-E2-A1LL-01A 7 10 5'UTR-CDS Intra-chr p13.33 Transcription factor p12.1 Seq+ 86949 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA3C-CNTNAP2 SEMA3C chr7 80916679 - CNTNAP2 chr7 148415417 + Exonic hg38 BRCA TCGA-E2-A1LL-01A 5 9 CDS-3'UTR Intra-chr q21.11 Tumor suppressor gene Seq+ 86950 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAP1L4-RPAP1 NAP1L4 chr11 2992254 - RPAP1 chr15 41537201 - Exonic hg38 BRCA TCGA-E2-A1LL-01A 2 18 5'UTR-5'UTR Inter-chr q15.1 Seq+ 86951 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-RAB11FIP4 NF1 chr17 31095369 + RAB11FIP4 chr17 31431813 + Exonic hg38 BRCA TCGA-E2-A1LL-01A 4 5 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 86952 ChimerSeq TCGA FAWG TCGA_RNA-Seq C6orf62-KIAA0319 C6orf62 chr6 24714318 - KIAA0319 chr6 24601208 - Exonic hg38 BRCA TCGA-E2-A1LL-01A 1 13 CDS-5'UTR Intra-chr p22.3 p22.3 Seq+ 86953 ChimerSeq TCGA FAWG TCGA_RNA-Seq CERS5-SAMD11 CERS5 chr12 50167101 - SAMD11 chr1 939040 + Exonic hg38 BRCA TCGA-E2-A1LL-01A 2 8 Out-of-frame Inter-chr q13.12 p36.33 Seq+ 86954 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC9-CFAP70 DNAJC9 chr10 73243843 - CFAP70 chr10 73256416 - Exonic hg38 BRCA TCGA-E2-A1LL-01A 3 3 In-Frame Intra-chr q22.2 q22.2 86955 ChimerSeq TCGA FAWG TCGA_RNA-Seq RABGAP1-PNPLA7 RABGAP1 chr9 122941093 + PNPLA7 chr9 137484736 - Exonic hg38 BRCA TCGA-E2-A1LL-01A 2 4 5'UTR-CDS Intra-chr q33.2 q34.3 Seq+ 86956 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANAPC5-KDM2B ANAPC5 chr12 121327096 - KDM2B chr12 121521100 - Exonic hg38 BRCA TCGA-E2-A1LL-01A 2 3 Out-of-frame Intra-chr q24.31 q24.31 Transcription factor Seq+ 86957 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMYND8-CELF5 ZMYND8 chr20 47347856 - CELF5 chr19 3250985 + Exonic hg38 BRCA TCGA-E2-A1LL-01A 1 6 In-Frame Inter-chr q13.12 p13.3 Seq+ 86958 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX11-DERA DDX11 chr12 31097997 + DERA chr12 15956936 + Exonic hg38 BRCA TCGA-E2-A1LL-01A 1 4 Out-of-frame Intra-chr p11.21 p12.3 86959 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNND1-TIMM10 CTNND1 chr11 57762046 + TIMM10 chr11 57530234 - Exonic hg38 BRCA TCGA-E2-A1LS-01A 1 11 5'UTR-5'UTR Intra-chr q12.1 Tumor suppressor gene q12.1 86960 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBL-UBE4A CBL chr11 119287946 + UBE4A chr11 118390657 + Exonic hg38 BRCA TCGA-E2-A1LS-01A 1 9 In-Frame Intra-chr q23.3 Oncogene Tumor suppressor gene q23.3 86961 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXJ3-ELAVL4 FOXJ3 chr1 42311050 - ELAVL4 chr1 50177089 + Exonic hg38 BRCA TCGA-E2-A1LS-01A 1 5 Out-of-frame Intra-chr p34.2 Transcription factor p33 Seq+ 86962 ChimerSeq TCGA FAWG TCGA_RNA-Seq VSIG10-GLIPR1L2 VSIG10 chr12 118126481 - GLIPR1L2 chr12 75430715 + Exonic hg38 BRCA TCGA-E2-A2P5-01A 7 21 5'UTR-5'UTR Intra-chr q24.23 q21.2 86963 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPOP-ARL5C SPOP chr17 49677933 - ARL5C chr17 39166617 - Exonic hg38 BRCA TCGA-E2-A3DX-01A 2 4 5'UTR-5'UTR Intra-chr q21.33 Oncogene Tumor suppressor gene q12 Seq+ 86964 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR61-MAPKAPK2 WDR61 chr15 78299562 - MAPKAPK2 chr1 206728710 + Exonic hg38 BRCA TCGA-E2-A56Z-01A 2 1 5'UTR-CDS Inter-chr q25.1 q32.1 CAMK:MAPKAPK 86965 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSGALNACT2-AGAP9 CSGALNACT2 chr10 43155810 + AGAP9 chr10 47520567 - Exonic hg38 BRCA TCGA-E2-A56Z-01A 1 1 In-Frame Intra-chr q11.21 q11.22 86966 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD5-ATG7 SETD5 chr3 9397977 + ATG7 chr3 11554811 + Exonic hg38 BRCA TCGA-E2-A56Z-01A 1 1 5'UTR-CDS Intra-chr p25.3 p25.3 Seq+ 86967 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPT1A-MS4A18 CPT1A chr11 68812437 - MS4A18 chr11 60741030 + Exonic hg38 BRCA TCGA-E2-A572-01A 8 26 Out-of-frame Intra-chr q13.3 Seq+ 86968 ChimerSeq TCGA FAWG TCGA_RNA-Seq PACS1-MS4A18 PACS1 chr11 66193573 + MS4A18 chr11 60729304 + Exonic hg38 BRCA TCGA-E2-A572-01A 1000 1000 CDS-5'UTR Intra-chr q13.1 86969 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPZB-SCEL CAPZB chr1 19344358 - SCEL chr13 77634379 + Exonic hg38 BRCA TCGA-E2-A573-01A 45 156 In-Frame Inter-chr p36.13 q22.3 Seq+ 86970 ChimerSeq TCGA FAWG TCGA_RNA-Seq PNN-EIF3M PNN chr14 39176149 + EIF3M chr11 32594914 + Exonic hg38 BRCA TCGA-E2-A573-01A 1 1 In-Frame Inter-chr q21.1 Tumor suppressor gene p13 86971 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR1-ADAM18 FGFR1 chr8 38457356 - ADAM18 chr8 39606307 + Exonic hg38 BRCA TCGA-E2-A574-01A 9 42 CDS-3'UTR Intra-chr p11.23 TK:FGFR Oncogene Seq+ 86972 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA2-UHRF1BP1 PLEKHA2 chr8 38957386 + UHRF1BP1 chr6 34870854 + Exonic hg38 BRCA TCGA-E2-A574-01A 1 1 Out-of-frame Inter-chr p11.22 p21.31 86973 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB7B-CKS1B ZBTB7B chr1 155002943 + CKS1B chr1 154977987 + Exonic hg38 BRCA TCGA-E2-A574-01A 1 1 5'UTR-5'UTR Intra-chr q21.3 Transcription factor q21.3 Oncogene Seq+ 86974 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF121-SF1 RNF121 chr11 71929124 + SF1 chr11 64776626 - Exonic hg38 BRCA TCGA-E2-A576-01A 5 11 Out-of-frame Intra-chr q13.4 q13.1 Seq+ 86975 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRBF2-CYP26A1 NRBF2 chr10 63133500 + CYP26A1 chr10 93075826 + Exonic hg38 BRCA TCGA-E2-A576-01A 2 22 In-Frame Intra-chr q21.3 q23.33 Seq+ 86976 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAPA-PPP5D1 NAPA chr19 47514843 - PPP5D1 chr19 46481440 - Exonic hg38 BRCA TCGA-E2-A9RU-01A 29 89 Out-of-frame Intra-chr q13.33 q13.32 Seq+ 86977 ChimerSeq TCGA FAWG TCGA_RNA-Seq MON2-PIP4K2C MON2 chr12 62549830 + PIP4K2C chr12 57595888 + Exonic hg38 BRCA TCGA-E2-A9RU-01A 2 33 In-Frame Intra-chr q14.1 q13.3 Seq+ 86978 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF6L-TMEM109 TAF6L chr11 62782825 + TMEM109 chr11 60920886 + Exonic hg38 BRCA TCGA-E2-A9RU-01A 5 21 In-Frame Intra-chr q12.3 q12.2 Seq+ 86979 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERC1-TACC3 ERC1 chr12 1083580 + TACC3 chr4 1739702 + Exonic hg38 BRCA TCGA-E2-A9RU-01A 7 12 In-Frame Inter-chr p16.3 Seq+ 86980 ChimerSeq TCGA FAWG TCGA_RNA-Seq JARID2-BMP6 JARID2 chr6 15410365 + BMP6 chr6 7879074 + Exonic hg38 BRCA TCGA-E2-A9RU-01A 6 10 Out-of-frame Intra-chr p22.3 p24.3 Seq+ 86981 ChimerSeq TCGA FAWG TCGA_RNA-Seq PREP-QRSL1 PREP chr6 105397853 - QRSL1 chr6 106640349 + Exonic hg38 BRCA TCGA-E2-A9RU-01A 7 1 In-Frame Intra-chr q21 q21 Seq+ 86982 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTA2-CDHR5 MTA2 chr11 62595264 - CDHR5 chr11 618111 - Exonic hg38 BRCA TCGA-E2-A9RU-01A 2 19 CDS-5'UTR Intra-chr q12.3 Seq+ 86983 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R2A-LGI3 PPP2R2A chr8 26354633 + LGI3 chr8 22152000 - Exonic hg38 BRCA TCGA-E2-A9RU-01A 2 7 Out-of-frame Intra-chr p21.2 p21.3 Seq+ 86984 ChimerSeq TCGA FAWG TCGA_RNA-Seq PXDNL-ATP6V1H PXDNL chr8 51809181 - ATP6V1H chr8 53756656 - Exonic hg38 BRCA TCGA-E2-A9RU-01A 2 6 In-Frame Intra-chr q11.23 q11.23 Seq+ 86985 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZZEF1-SPATA22 ZZEF1 chr17 4102317 - SPATA22 chr17 3469398 - Exonic hg38 BRCA TCGA-E2-A9RU-01A 2 4 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 86986 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT2-LACE1 GALNT2 chr1 230067406 + LACE1 chr6 108519697 + Exonic hg38 BRCA TCGA-E2-A9RU-01A 2 2 Out-of-frame Inter-chr q42.13 Seq+ 86987 ChimerSeq TCGA FAWG TCGA_RNA-Seq QRSL1-ATG5 QRSL1 chr6 106643090 + ATG5 chr6 106293106 - Exonic hg38 BRCA TCGA-E2-A9RU-01A 1 2 In-Frame Intra-chr q21 q21 86988 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD51B-DCAF5 RAD51B chr14 67887204 + DCAF5 chr14 69122360 - Exonic hg38 BRCA TCGA-E9-A1N4-01A 2 2 Out-of-frame Intra-chr q24.1 q24.1 KB Seq+ 86989 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF121-FADS2 RNF121 chr11 71960891 + FADS2 chr11 61857011 + Exonic hg38 BRCA TCGA-E9-A1N5-01A 28 54 In-Frame Intra-chr q13.4 q12.2 Seq+ 86990 ChimerSeq TCGA FAWG TCGA_RNA-Seq TESMIN-HIPK3 TESMIN chr11 68713270 - HIPK3 chr11 33351608 + Exonic hg38 BRCA TCGA-E9-A1N5-01A 2 11 Out-of-frame Intra-chr q13.3 p13 CMGC:DYRK 86991 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMYD3-WLS SMYD3 chr1 246355031 - WLS chr1 68194227 - Exonic hg38 BRCA TCGA-E9-A1N6-01A 4 38 Out-of-frame Intra-chr q44 Transcription factor p31.3 Seq+ 86992 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNA12-ADSS GNA12 chr7 2794928 - ADSS chr1 244437768 - Exonic hg38 BRCA TCGA-E9-A1N6-01A 3 24 In-Frame Inter-chr p22.2 q44 Seq+ 86993 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-ACACA NF1 chr17 31095369 + ACACA chr17 37162050 - Exonic hg38 BRCA TCGA-E9-A1N6-01A 6 10 CDS-5'UTR Intra-chr q11.2 Oncogene Tumor suppressor gene Seq+ 86994 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIN-TOGARAM1 NIN chr14 50830464 - TOGARAM1 chr14 45052436 + Exonic hg38 BRCA TCGA-E9-A1N6-01A 3 15 5'UTR-5'UTR Intra-chr q22.1 Oncogene q21.2 86995 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2O-RNF213 UBE2O chr17 76452725 - RNF213 chr17 80358288 + Exonic hg38 BRCA TCGA-E9-A1N6-01A 2 6 Out-of-frame Intra-chr q25.1 q25.3 Oncogene Seq+ 86996 ChimerSeq TCGA FAWG TCGA_RNA-Seq PFKFB4-MYRIP PFKFB4 chr3 48556681 - MYRIP chr3 39900787 + Exonic hg38 BRCA TCGA-E9-A1N6-01A 1 4 5'UTR-5'UTR Intra-chr p21.31 p22.1 Seq+ 86997 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLGA7-SLC25A44 GOLGA7 chr8 41507121 + SLC25A44 chr1 156199835 + Exonic hg38 BRCA TCGA-E9-A1N6-01A 1 3 5'UTR-5'UTR Inter-chr p11.21 q22 86998 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOMO2-FBRS NOMO2 chr16 18561876 - FBRS chr16 30662420 + Exonic hg38 BRCA TCGA-E9-A1N8-01A 28 95 In-Frame Intra-chr p12.3 p11.2 86999 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRK-SLC35F1 PTPRK chr6 128064758 - SLC35F1 chr6 118154445 + Exonic hg38 BRCA TCGA-E9-A1N8-01A 5 37 5'UTR-CDS Intra-chr Tumor suppressor gene q22.2 Seq+ 87000 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFATC2IP-C16orf62 NFATC2IP chr16 28952204 + C16orf62 chr16 19705116 + Exonic hg38 BRCA TCGA-E9-A1N8-01A 6 10 Out-of-frame Intra-chr p11.2 p12.3 87001 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEX7-TCF21 PEX7 chr6 136826469 + TCF21 chr6 133889418 + Exonic hg38 BRCA TCGA-E9-A1N8-01A 4 15 In-Frame Intra-chr q23.3 q23.2 Transcription factor Seq+ 87002 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOMO2-PRR14 NOMO2 chr16 18561876 - PRR14 chr16 30655351 + Exonic hg38 BRCA TCGA-E9-A1N8-01A 5 3 Out-of-frame Intra-chr p12.3 p11.2 Seq+ 87003 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIP5K1C-C3 PIP5K1C chr19 3647338 - C3 chr19 6719403 - Exonic hg38 BRCA TCGA-E9-A1N8-01A 2 13 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 87004 ChimerSeq TCGA FAWG TCGA_RNA-Seq HEATR6-WEE1 HEATR6 chr17 60072215 - WEE1 chr11 9581532 + Exonic hg38 BRCA TCGA-E9-A1N8-01A 4 4 Out-of-frame Inter-chr q23.1 p15.4 Seq+ 87005 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM265-GABBR2 TMEM265 chr16 30741908 + GABBR2 chr9 98578072 - Exonic hg38 BRCA TCGA-E9-A1N8-01A 2 5 In-Frame Inter-chr p11.2 q22.33 87006 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0556-NECAB2 KIAA0556 chr16 27573956 + NECAB2 chr16 83972151 + Exonic hg38 BRCA TCGA-E9-A1N8-01A 1 4 In-Frame Intra-chr p12.1 q23.3 Seq+ 87007 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGST1-IPO8 MGST1 chr12 16354270 + IPO8 chr12 30676587 - Exonic hg38 BRCA TCGA-E9-A1N8-01A 1 1 In-Frame Intra-chr p12.3 p11.21 87008 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERLIN2-RAB11FIP1 ERLIN2 chr8 37744696 + RAB11FIP1 chr8 37877551 - Exonic hg38 BRCA TCGA-E9-A1N9-01A 25 51 Out-of-frame Intra-chr p11.23 p11.23 Seq+ 87009 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEMF-CDKL1 NEMF chr14 49828291 - CDKL1 chr14 50342222 - Exonic hg38 BRCA TCGA-E9-A1N9-01A 20 16 In-Frame Intra-chr q21.3 q22.1 CMGC:CDKL Seq+ 87010 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGN-CTNNA2 PIGN chr18 62095848 - CTNNA2 chr2 80647585 + Exonic hg38 BRCA TCGA-E9-A1N9-01A 6 36 Out-of-frame Inter-chr q21.33 p12 Tumor suppressor gene Seq+ 87011 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM52B-RHNO1 TMEM52B chr12 10186589 + RHNO1 chr12 2885283 + Exonic hg38 BRCA TCGA-E9-A1N9-01A 9 19 CDS-5'UTR Intra-chr p13.2 p13.33 Seq+ 87012 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG4D-TMEM52B ATG4D chr19 10549034 + TMEM52B chr12 10175282 + Exonic hg38 BRCA TCGA-E9-A1N9-01A 7 22 5'UTR-5'UTR Inter-chr p13.2 p13.2 87013 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP188-ASTN2 NUP188 chr9 128973249 + ASTN2 chr9 116620443 - Exonic hg38 BRCA TCGA-E9-A1N9-01A 6 20 In-Frame Intra-chr q34.11 q33.1 Seq+ 87014 ChimerSeq TCGA FAWG TCGA_RNA-Seq INPP5B-FAF1 INPP5B chr1 37931673 - FAF1 chr1 50705891 - Exonic hg38 BRCA TCGA-E9-A1N9-01A 8 11 Out-of-frame Intra-chr p34.3 p32.3 87015 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAD2-ZNF252P ATAD2 chr8 123396187 - ZNF252P chr8 144978553 - Exonic hg38 BRCA TCGA-E9-A1N9-01A 4 6 CDS-3'UTR Intra-chr q24.13 q24.3 Seq+ 87016 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGL-UBE4B AGL chr1 99876597 + UBE4B chr1 10033222 + Exonic hg38 BRCA TCGA-E9-A1N9-01A 4 5 CDS-5'UTR Intra-chr p21.2 p36.22 Tumor suppressor gene Seq+ 87017 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADIPOR2-FAM72B ADIPOR2 chr12 1691213 + FAM72B chr1 121181348 - Exonic hg38 BRCA TCGA-E9-A1N9-01A 3 3 3'UTR-CDS Inter-chr p13.33 p11.2 Seq+ 87018 ChimerSeq TCGA FAWG TCGA_RNA-Seq OCEL1-SMARCA4 OCEL1 chr19 17227199 + SMARCA4 chr19 10984121 + Exonic hg38 BRCA TCGA-E9-A1N9-01A 2 3 CDS-5'UTR Intra-chr p13.11 p13.2 Oncogene Tumor suppressor gene Seq+ 87019 ChimerSeq TCGA FAWG TCGA_RNA-Seq MORN1-CMPK1 MORN1 chr1 2384978 - CMPK1 chr1 47368469 + Exonic hg38 BRCA TCGA-E9-A1N9-01A 1 5 In-Frame Intra-chr p36.32 p33 Oncogene Seq+ 87020 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPRD1A-SLC39A6 RPRD1A chr18 36026900 - SLC39A6 chr18 36122270 - Exonic hg38 BRCA TCGA-E9-A1NA-01A 746 2026 In-Frame Intra-chr q12.2 q12.2 Seq+ 87021 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRK-HECA PTPRK chr6 128520259 - HECA chr6 139166284 + Exonic hg38 BRCA TCGA-E9-A1NA-01A 119 360 5'UTR-CDS Intra-chr Tumor suppressor gene q24.1 Tumor suppressor gene Seq+ 87022 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA4C-AFF3 SEMA4C chr2 96861579 - AFF3 chr2 99649666 - Exonic hg38 BRCA TCGA-E9-A1NA-01A 55 64 Out-of-frame Intra-chr q11.2 q11.2 Oncogene Seq+ 87023 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCP2-REEP5 DCP2 chr5 112976986 + REEP5 chr5 112921256 - Exonic hg38 BRCA TCGA-E9-A1NA-01A 37 75 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 87024 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPNMB-NUPL2 GPNMB chr7 23254312 + NUPL2 chr7 23185070 + Exonic hg38 BRCA TCGA-E9-A1NA-01A 16 76 Out-of-frame Intra-chr p15.3 p15.3 Seq+ 87025 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNH1-SCT RNH1 chr11 507113 - SCT chr11 626530 - Exonic hg38 BRCA TCGA-E9-A1NA-01A 11 88 5'UTR-5'UTR Intra-chr Tumor suppressor gene Seq+ 87026 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC37A1-PCP4 SLC37A1 chr21 42568438 + PCP4 chr21 39928984 + Exonic hg38 BRCA TCGA-E9-A1NA-01A 12 37 In-Frame Intra-chr q22.3 q22.2 Seq+ 87027 ChimerSeq TCGA FAWG TCGA_RNA-Seq UHMK1-PPOX UHMK1 chr1 162518190 + PPOX chr1 161169660 + Exonic hg38 BRCA TCGA-E9-A1NA-01A 8 42 In-Frame Intra-chr q23.3 q23.3 Seq+ 87028 ChimerSeq TCGA FAWG TCGA_RNA-Seq LONP1-IT1 LONP1 chr19 5700789 - IT1 chr13 75879704 + Exonic hg38 BRCA TCGA-E9-A1NA-01A 10 31 Out-of-frame Inter-chr p13.3 87029 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFAT5-IST1 NFAT5 chr16 69566374 + IST1 chr16 71927614 + Exonic hg38 BRCA TCGA-E9-A1NA-01A 11 26 In-Frame Intra-chr q22.1 Transcription factor q22.2 Seq+ 87030 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHB2-FAM168B PLEKHB2 chr2 131105398 + FAM168B chr2 131082657 - Exonic hg38 BRCA TCGA-E9-A1NA-01A 10 27 5'UTR-5'UTR Intra-chr q21.1 q21.1 Seq+ 87031 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-WIPI1 BCAS3 chr17 60808076 + WIPI1 chr17 68436479 - Exonic hg38 BRCA TCGA-E9-A1NA-01A 8 16 Out-of-frame Intra-chr q23.2 q24.2 Seq+ 87032 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC16A6-PECAM1 SLC16A6 chr17 68291086 - PECAM1 chr17 64360415 - Exonic hg38 BRCA TCGA-E9-A1NA-01A 5 23 5'UTR-CDS Intra-chr q24.2 q23.3 87033 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKAP1-BCAS3 SKAP1 chr17 48345905 - BCAS3 chr17 60808004 + Exonic hg38 BRCA TCGA-E9-A1NA-01A 8 5 In-Frame Intra-chr q21.32 q23.2 Seq+ 87034 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSAP-APTR GSAP chr7 77396982 - APTR chr7 77659318 - Exonic hg38 BRCA TCGA-E9-A1NA-01A 4 20 3'UTR-3'UTR Intra-chr q11.23 q11.23 87035 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCL1-ARNT MCL1 chr1 150577368 - ARNT chr1 150818030 - Exonic hg38 BRCA TCGA-E9-A1NA-01A 4 19 In-Frame Intra-chr q21.2 Oncogene q21.3 Oncogene Transcription factor Seq+ 87036 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF587B-TMEM150B ZNF587B chr19 57819945 + TMEM150B chr19 55322743 - Exonic hg38 BRCA TCGA-E9-A1NA-01A 2 27 5'UTR-5'UTR Intra-chr q13.43 Transcription factor q13.42 Seq+ 87037 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIST4H4-RERG HIST4H4 chr12 14770679 - RERG chr12 15121119 - Exonic hg38 BRCA TCGA-E9-A1NA-01A 3 15 3'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 87038 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP1-TMEM5 SRGAP1 chr12 63844883 + TMEM5 chr12 63781019 + Exonic hg38 BRCA TCGA-E9-A1NA-01A 3 9 Out-of-frame Intra-chr q14.2 q14.2 Seq+ 87039 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP112-OTOA CEP112 chr17 66096251 - OTOA chr16 21719133 + Exonic hg38 BRCA TCGA-E9-A1NA-01A 3 7 CDS-3'UTR Inter-chr q24.1 p12.2 Seq+ 87040 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTF2-RPL5 MTF2 chr1 93079531 + RPL5 chr1 92833389 + Exonic hg38 BRCA TCGA-E9-A1NA-01A 3 6 Out-of-frame Intra-chr p22.1 Transcription factor p22.1 Tumor suppressor gene Seq+ 87041 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPHX2-BNIP3L EPHX2 chr8 27544244 + BNIP3L chr8 26408000 + Exonic hg38 BRCA TCGA-E9-A1NA-01A 3 2 Out-of-frame Intra-chr p21.2 p21.2 Tumor suppressor gene Seq+ 87042 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF587-BRSK1 ZNF587 chr19 57856233 + BRSK1 chr19 55306252 + Exonic hg38 BRCA TCGA-E9-A1NA-01A 2 6 Out-of-frame Intra-chr q13.43 Transcription factor q13.42 CAMK:CAMKL Tumor suppressor gene Seq+ 87043 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPOAP1-SNF8 TSPOAP1 chr17 58322308 - SNF8 chr17 48933346 - Exonic hg38 BRCA TCGA-E9-A1NA-01A 2 4 Out-of-frame Intra-chr q22 q21.32 87044 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR155-CHN1 GPR155 chr2 174453737 - CHN1 chr2 174812482 - Exonic hg38 BRCA TCGA-E9-A1NA-01A 2 3 In-Frame Intra-chr q31.1 q31.1 87045 ChimerSeq TCGA FAWG TCGA_RNA-Seq DZIP1L-A4GNT DZIP1L chr3 138112364 - A4GNT chr3 138131282 - Exonic hg38 BRCA TCGA-E9-A1NA-01A 2 2 5'UTR-5'UTR Intra-chr q22.3 q22.3 87046 ChimerSeq TCGA FAWG TCGA_RNA-Seq AXIN1-IFT140 AXIN1 chr16 304304 - IFT140 chr16 1526796 - Exonic hg38 BRCA TCGA-E9-A1NA-01A 1 5 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 87047 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESR1-MYCT1 ESR1 chr6 151944508 + MYCT1 chr6 152721742 + Exonic hg38 BRCA TCGA-E9-A1NA-01A 1 4 In-Frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.2 87048 ChimerSeq TCGA FAWG TCGA_RNA-Seq CABLES1-RBBP8 CABLES1 chr18 23194540 + RBBP8 chr18 22968806 + Exonic hg38 BRCA TCGA-E9-A1NA-01A 1 3 In-Frame Intra-chr q11.2 Tumor suppressor gene q11.2 Tumor suppressor gene Seq+ 87049 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTTN-PPP6R3 CTTN chr11 70419856 + PPP6R3 chr11 68548067 + Exonic hg38 BRCA TCGA-E9-A1NA-01A 1 3 Out-of-frame Intra-chr q13.3 q13.2 Seq+ 87050 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPI-ARIH1 MPI chr15 74892802 + ARIH1 chr15 72496791 + Exonic hg38 BRCA TCGA-E9-A1NA-01A 1 3 Out-of-frame Intra-chr q24.1 q24.1 87051 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANBP10-ZFHX3 RANBP10 chr16 67805428 - ZFHX3 chr16 72960194 - Exonic hg38 BRCA TCGA-E9-A1NA-01A 1 3 5'UTR-5'UTR Intra-chr q22.1 q22.3 Tumor suppressor gene Transcription factor 87052 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTF2-FAM69A MTF2 chr1 93079531 + FAM69A chr1 92876430 - Exonic hg38 BRCA TCGA-E9-A1NA-01A 1 2 Out-of-frame Intra-chr p22.1 Transcription factor p22.1 87053 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC59-SPAG9 LRRC59 chr17 50392398 - SPAG9 chr17 50979917 - Exonic hg38 BRCA TCGA-E9-A1NC-01A 32 91 In-Frame Intra-chr q21.33 q21.33 Seq+ 87054 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D12-SLC35G1 TBC1D12 chr10 94497172 + SLC35G1 chr10 93954009 + Exonic hg38 BRCA TCGA-E9-A1NC-01A 1 13 CDS-3'UTR Intra-chr q23.33 q23.33 87055 ChimerSeq TCGA FAWG TCGA_RNA-Seq ILF3-ZNF627 ILF3 chr19 10677310 + ZNF627 chr19 11575250 + Exonic hg38 BRCA TCGA-E9-A1ND-01A 12 45 CDS-5'UTR Intra-chr p13.2 p13.2 Transcription factor Seq+ 87056 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM160B2-DMTN FAM160B2 chr8 22089298 + DMTN chr8 22069881 + Exonic hg38 BRCA TCGA-E9-A1ND-01A 2 7 Out-of-frame Intra-chr p21.3 p21.3 Seq+ 87057 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKP2-DNM1L PKP2 chr12 32850766 - DNM1L chr12 32701415 + Exonic hg38 BRCA TCGA-E9-A1ND-01A 1 2 Out-of-frame Intra-chr p11.21 p11.21 Seq+ 87058 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUL3-IRS1 CUL3 chr2 224557659 - IRS1 chr2 226736250 - Exonic hg38 BRCA TCGA-E9-A1NE-01A 67 278 CDS-3'UTR Intra-chr q36.2 q36.3 Seq+ 87059 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNRF1-BCAS4 ZNRF1 chr16 75000095 + BCAS4 chr20 50818211 + Exonic hg38 BRCA TCGA-E9-A1NE-01A 3 12 Out-of-frame Inter-chr q23.1 q13.13 Seq+ 87060 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAP1-ADCY9 TRAP1 chr16 3671722 - ADCY9 chr16 3979275 - Exonic hg38 BRCA TCGA-E9-A1NE-01A 3 7 In-Frame Intra-chr p13.3 p13.3 Seq+ 87061 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHBG-CCT3 RHBG chr1 156369436 + CCT3 chr1 156335888 - Exonic hg38 BRCA TCGA-E9-A1NE-01A 2 8 In-Frame Intra-chr q22 q22 Seq+ 87062 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRPPRC-EIF4G2 LRPPRC chr2 43896634 - EIF4G2 chr11 10799113 - Exonic hg38 BRCA TCGA-E9-A1NE-01A 2 1 Out-of-frame Inter-chr p21 p15.4 Seq+ 87063 ChimerSeq TCGA FAWG TCGA_RNA-Seq THBS4-COL3A1 THBS4 chr5 80035625 + COL3A1 chr2 189008035 + Exonic hg38 BRCA TCGA-E9-A1NE-01A 1 3 Out-of-frame Inter-chr q14.1 q32.2 87064 ChimerSeq TCGA FAWG TCGA_RNA-Seq SASH1-ARID1B SASH1 chr6 148390262 + ARID1B chr6 156935466 + Exonic hg38 BRCA TCGA-E9-A1NF-01A 9 40 In-Frame Intra-chr q24.3 Tumor suppressor gene q25.3 Oncogene Seq+ 87065 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGF1R-PPP4R1 IGF1R chr15 98924684 + PPP4R1 chr18 9595153 - Exonic hg38 BRCA TCGA-E9-A1NF-01A 3 49 In-Frame Inter-chr q26.3 TK:InsR Oncogene p11.22 Seq+ 87066 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1B-GACAT2 ARID1B chr6 156935576 + GACAT2 chr18 8696121 - Exonic hg38 BRCA TCGA-E9-A1NF-01A 4 26 CDS-3'UTR Inter-chr q25.3 Oncogene p11.22 87067 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGF1R-ARID1B IGF1R chr15 98708107 + ARID1B chr6 157148624 + Exonic hg38 BRCA TCGA-E9-A1NF-01A 4 13 In-Frame Inter-chr q26.3 TK:InsR Oncogene q25.3 Oncogene Seq+ 87068 ChimerSeq TCGA FAWG TCGA_RNA-Seq MFGE8-IGF1R MFGE8 chr15 88905757 - IGF1R chr15 98891325 + Exonic hg38 BRCA TCGA-E9-A1NF-01A 4 8 In-Frame Intra-chr q26.1 q26.3 TK:InsR Oncogene Seq+ 87069 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP3S2-KIF7 AP3S2 chr15 89871475 - KIF7 chr15 89608968 - Exonic hg38 BRCA TCGA-E9-A1NF-01A 3 7 3'UTR-3'UTR Intra-chr q26.1 q26.1 Tumor suppressor gene 87070 ChimerSeq TCGA FAWG TCGA_RNA-Seq POSTN-COL1A2 POSTN chr13 37590372 - COL1A2 chr7 94419498 + Exonic hg38 BRCA TCGA-E9-A1NF-01A 1 11 In-Frame Inter-chr q13.3 q21.3 87071 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMOD3-CERNA1 TMOD3 chr15 51902036 + CERNA1 chr15 52204889 + Exonic hg38 BRCA TCGA-E9-A1NF-01A 2 6 CDS-5'UTR Intra-chr q21.2 q21.2 87072 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP50-CDK5RAP1 NUP50 chr22 45176080 + CDK5RAP1 chr20 33359123 - Exonic hg38 BRCA TCGA-E9-A1NF-01A 2 4 Out-of-frame Inter-chr q13.31 q11.21 Seq+ 87073 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERINC3-TWSG1 SERINC3 chr20 44500258 - TWSG1 chr18 9396280 + Exonic hg38 BRCA TCGA-E9-A1NF-01A 1 8 3'UTR-CDS Inter-chr q13.12 p11.22 Seq+ 87074 ChimerSeq TCGA FAWG TCGA_RNA-Seq VRK2-CHSY1 VRK2 chr2 58048967 + CHSY1 chr15 101178980 - Exonic hg38 BRCA TCGA-E9-A1NF-01A 1 6 Out-of-frame Inter-chr p16.1 CK1:VRK q26.3 Seq+ 87075 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRWD1-ABCG1 BRWD1 chr21 39293811 - ABCG1 chr21 42225671 + Exonic hg38 BRCA TCGA-E9-A1NF-01A 1 5 In-Frame Intra-chr q22.2 q22.3 Seq+ 87076 ChimerSeq TCGA FAWG TCGA_RNA-Seq IQGAP1-CIB1 IQGAP1 chr15 90426266 + CIB1 chr15 90231507 - Exonic hg38 BRCA TCGA-E9-A1NF-01A 1 2 In-Frame Intra-chr q26.1 q26.1 87077 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF18-MYO9B ARHGEF18 chr19 7447168 + MYO9B chr19 17145397 + Exonic hg38 BRCA TCGA-E9-A1NG-01A 5 18 In-Frame Intra-chr p13.2 p13.11 Seq+ 87078 ChimerSeq TCGA FAWG TCGA_RNA-Seq MISP-C2orf42 MISP chr19 751171 + C2orf42 chr2 70165635 - Exonic hg38 BRCA TCGA-E9-A1NI-01A 6 5 5'UTR-CDS Inter-chr p13.3 p13.3 87079 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAG17-RABGAP1L SPAG17 chr1 118150543 - RABGAP1L chr1 174957457 + Exonic hg38 BRCA TCGA-E9-A1NI-01A 1 12 In-Frame Intra-chr p12 q25.1 Seq+ 87080 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACAP2-XXYLT1 ACAP2 chr3 195381009 - XXYLT1 chr3 195070111 - Exonic hg38 BRCA TCGA-E9-A1QZ-01A 2 5 Out-of-frame Intra-chr q29 q29 Seq+ 87081 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPN2-STAU1 RPN2 chr20 37213865 + STAU1 chr20 49124587 - Exonic hg38 BRCA TCGA-E9-A1R0-01A 1 7 In-Frame Intra-chr q11.23 q13.13 87082 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAR1-PSMB7 FAR1 chr11 13668806 + PSMB7 chr9 124356915 - Exonic hg38 BRCA TCGA-E9-A1R0-01A 2 1 5'UTR-CDS Inter-chr p15.3 q33.3 Seq+ 87083 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRBF2-SAE1 NRBF2 chr10 63146293 + SAE1 chr19 47143494 + Exonic hg38 BRCA TCGA-E9-A1R2-01A 1 5 Out-of-frame Inter-chr q21.3 q13.32 87084 ChimerSeq TCGA FAWG TCGA_RNA-Seq REPS2-NHS REPS2 chrX 17103779 + NHS chrX 17719344 + Exonic hg38 BRCA TCGA-E9-A1R3-01A 3 5 In-Frame Intra-chr p22.2 p22.2 87085 ChimerSeq TCGA FAWG TCGA_RNA-Seq TECR-PKN1 TECR chr19 14529711 + PKN1 chr19 14463667 + Exonic hg38 BRCA TCGA-E9-A1R4-01A 1 4 In-Frame Intra-chr p13.12 p13.12 AGC:PKN Seq+ 87086 ChimerSeq TCGA FAWG TCGA_RNA-Seq BET1L-LMF1 BET1L chr11 168943 - LMF1 chr16 954666 - Exonic hg38 BRCA TCGA-E9-A1R4-01A 1 2 3'UTR-3'UTR Inter-chr p15.5 p13.3 87087 ChimerSeq TCGA FAWG TCGA_RNA-Seq JADE2-RPLP0P2 JADE2 chr5 134538083 + RPLP0P2 chr11 61628842 + Exonic hg38 BRCA TCGA-E9-A1R5-01A 11 37 CDS-5'UTR Inter-chr q31.1 q12.2 87088 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCAPG2-N4BP2 NCAPG2 chr7 158701822 - N4BP2 chr4 40152780 + Exonic hg38 BRCA TCGA-E9-A1R6-01A 14 46 Out-of-frame Inter-chr q36.3 p14 Seq+ 87089 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEDD4L-ZNF396 NEDD4L chr18 58252054 + ZNF396 chr18 35374364 - Exonic hg38 BRCA TCGA-E9-A1R6-01A 4 27 5'UTR-5'UTR Intra-chr q21.31 Tumor suppressor gene q12.2 Transcription factor Seq+ 87090 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO5B-CLUL1 MYO5B chr18 50194767 - CLUL1 chr18 617988 + Exonic hg38 BRCA TCGA-E9-A1R6-01A 3 9 Out-of-frame Intra-chr q21.1 p11.32 Seq+ 87091 ChimerSeq TCGA FAWG TCGA_RNA-Seq HTT-ESYT2 HTT chr4 3199939 + ESYT2 chr7 158773396 - Exonic hg38 BRCA TCGA-E9-A1R6-01A 1 15 Out-of-frame Inter-chr p16.3 q36.3 Seq+ 87092 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB12-MYO5B RAB12 chr18 8624998 + MYO5B chr18 50001411 - Exonic hg38 BRCA TCGA-E9-A1R6-01A 3 2 In-Frame Intra-chr p11.22 q21.1 Seq+ 87093 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF407-C18orf63 ZNF407 chr18 74597937 + C18orf63 chr18 74342032 + Exonic hg38 BRCA TCGA-E9-A1R6-01A 1 9 5'UTR-CDS Intra-chr q22.3 Transcription factor q22.3 87094 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOCS3-NIPAL3 MOCS3 chr20 50961573 + NIPAL3 chr1 24472098 + Exonic hg38 BRCA TCGA-E9-A1R7-01A 89 243 Out-of-frame Inter-chr q13.13 p36.11 Seq+ 87095 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCMH1-PPT1 SCMH1 chr1 41070595 - PPT1 chr1 40074183 - Exonic hg38 BRCA TCGA-E9-A1R7-01A 40 117 Out-of-frame Intra-chr p34.2 Transcription factor p34.2 Seq+ 87096 ChimerSeq TCGA FAWG TCGA_RNA-Seq RMND1-ZDHHC14 RMND1 chr6 151417279 - ZDHHC14 chr6 157672724 + Exonic hg38 BRCA TCGA-E9-A1R7-01A 6 56 In-Frame Intra-chr q25.1 q25.3 Seq+ 87097 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF4-FAF1 TAF4 chr20 62012815 - FAF1 chr1 50584811 - Exonic hg38 BRCA TCGA-E9-A1R7-01A 7 37 5'UTR-CDS Inter-chr p32.3 Seq+ 87098 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACOT11-C8B ACOT11 chr1 54585904 + C8B chr1 56952180 - Exonic hg38 BRCA TCGA-E9-A1R7-01A 9 22 In-Frame Intra-chr p32.3 p32.2 Seq+ 87099 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEF1-OSBPL9 PEF1 chr1 31644841 - OSBPL9 chr1 51745536 + Exonic hg38 BRCA TCGA-E9-A1R7-01A 9 4 In-Frame Intra-chr p35.2 p32.3 Seq+ 87100 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM157A-C9 FAM157A chr3 198169872 + C9 chr5 39316029 - Exonic hg38 BRCA TCGA-E9-A1R7-01A 4 14 5'UTR-CDS Inter-chr q29 p13.1 Seq+ 87101 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXJ3-ZNF362 FOXJ3 chr1 42265115 - ZNF362 chr1 33276100 + Exonic hg38 BRCA TCGA-E9-A1R7-01A 4 10 Out-of-frame Intra-chr p34.2 Transcription factor p35.1 Transcription factor Seq+ 87102 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAF1-HCRTR1 FAF1 chr1 50490588 - HCRTR1 chr1 31632436 + Exonic hg38 BRCA TCGA-E9-A1R7-01A 4 9 CDS-3'UTR Intra-chr p32.3 p35.2 Seq+ 87103 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC22B-ACOT11 SEC22B chr1 120168840 - ACOT11 chr1 54597259 + Exonic hg38 BRCA TCGA-E9-A1R7-01A 2 16 Out-of-frame Intra-chr p12 p32.3 Seq+ 87104 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL9-C1orf87 OSBPL9 chr1 51652041 + C1orf87 chr1 60010456 - Exonic hg38 BRCA TCGA-E9-A1R7-01A 3 11 Out-of-frame Intra-chr p32.3 p32.1 Seq+ 87105 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPM1-TAF4 DPM1 chr20 50940865 - TAF4 chr20 62014707 - Exonic hg38 BRCA TCGA-E9-A1R7-01A 1 12 CDS-5'UTR Intra-chr q13.13 87106 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNMT1-KLF1 DNMT1 chr19 10168330 - KLF1 chr19 12886142 - Exonic hg38 BRCA TCGA-E9-A1R7-01A 1 1 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene Transcription factor p13.13 Transcription factor 87107 ChimerSeq TCGA FAWG TCGA_RNA-Seq QTRT1-ILF3 QTRT1 chr19 10702254 + ILF3 chr19 10680346 + Exonic hg38 BRCA TCGA-E9-A1R7-01A 1 1 In-Frame Intra-chr p13.2 p13.2 87108 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDHX-CAT PDHX chr11 34978182 + CAT chr11 34456011 + Exonic hg38 BRCA TCGA-E9-A1RB-01A 10 52 In-Frame Intra-chr p13 p13 Tumor suppressor gene Seq+ 87109 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASCC1-MICU1 ASCC1 chr10 72196811 - MICU1 chr10 72408037 - Exonic hg38 BRCA TCGA-E9-A1RB-01A 8 21 In-Frame Intra-chr q22.1 q22.1 Seq+ 87110 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAST2-MMEL1 MAST2 chr1 46027863 + MMEL1 chr1 2612204 - Exonic hg38 BRCA TCGA-E9-A1RB-01A 2 8 CDS-5'UTR Intra-chr p34.1 AGC:MAST Seq+ 87111 ChimerSeq TCGA FAWG TCGA_RNA-Seq CABLES1-RBBP8 CABLES1 chr18 23136607 + RBBP8 chr18 23016828 + Exonic hg38 BRCA TCGA-E9-A1RB-01A 1 6 In-Frame Intra-chr q11.2 Tumor suppressor gene q11.2 Tumor suppressor gene Seq+ 87112 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPA2B1-UBAP2L HNRNPA2B1 chr7 26200572 - UBAP2L chr1 154225084 + Exonic hg38 BRCA TCGA-E9-A1RB-01A 1 2 CDS-5'UTR Inter-chr p15.2 q21.3 87113 ChimerSeq TCGA FAWG TCGA_RNA-Seq HARS-FAM53C HARS chr5 140690855 - FAM53C chr5 138341184 + Exonic hg38 BRCA TCGA-E9-A1RC-01A 9 30 CDS-5'UTR Intra-chr q31.3 q31.2 Seq+ 87114 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLIN1-ACSL6 PLIN1 chr15 89669500 - ACSL6 chr5 131985458 - Exonic hg38 BRCA TCGA-E9-A1RC-01A 2 28 In-Frame Inter-chr q26.1 q31.1 Seq+ 87115 ChimerSeq TCGA FAWG TCGA_RNA-Seq FSTL4-SIL1 FSTL4 chr5 133312654 - SIL1 chr5 138951884 - Exonic hg38 BRCA TCGA-E9-A1RC-01A 2 2 Out-of-frame Intra-chr q31.1 q31.2 Seq+ 87116 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC112-EPB41L4A CCDC112 chr5 115296427 - EPB41L4A chr5 112307490 - Exonic hg38 BRCA TCGA-E9-A1RC-01A 1 2 In-Frame Intra-chr q22.3 q22.2 87117 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIPK1-BCKDHB RIPK1 chr6 3085408 + BCKDHB chr6 80273135 + Exonic hg38 BRCA TCGA-E9-A1RE-01A 19 40 Out-of-frame Intra-chr p25.2 TKL:RIPK q14.1 Seq+ 87118 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC149-ARAP2 CCDC149 chr4 24873681 - ARAP2 chr4 36073823 - Exonic hg38 BRCA TCGA-E9-A1RE-01A 9 27 In-Frame Intra-chr p15.2 p14 Seq+ 87119 ChimerSeq TCGA FAWG TCGA_RNA-Seq CENPBD1P1-IGHJ2 CENPBD1P1 chr19 58581778 + IGHJ2 chr14 105865247 - Exonic hg38 BRCA TCGA-E9-A1RE-01A 12 0 Out-of-frame Inter-chr q13.43 87120 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRG6-CLSTN2 ADGRG6 chr6 142309644 + CLSTN2 chr3 140175951 + Exonic hg38 BRCA TCGA-E9-A1RE-01A 1 14 In-Frame Inter-chr q24.2 q23 87121 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC20A2-UNC5D SLC20A2 chr8 42541538 - UNC5D chr8 35568098 + Exonic hg38 BRCA TCGA-E9-A1RE-01A 1 12 5'UTR-CDS Intra-chr p11.21 p12 Tumor suppressor gene Seq+ 87122 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKDC-ARHGAP23 PRKDC chr8 47782162 - ARHGAP23 chr17 38479436 + Exonic hg38 BRCA TCGA-E9-A1RE-01A 3 0 CDS-3'UTR Inter-chr q11.21 Oncogene q12 87123 ChimerSeq TCGA FAWG TCGA_RNA-Seq FTL-KBTBD2 FTL chr19 48966406 + KBTBD2 chr7 32894096 - Exonic hg38 BRCA TCGA-E9-A1RF-01A 499 1000 CDS-5'UTR Inter-chr q13.33 p14.3 Seq+ 87124 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUPT5H-SIPA1L3 SUPT5H chr19 39445965 + SIPA1L3 chr19 38152840 + Exonic hg38 BRCA TCGA-E9-A1RF-01A 41 212 Out-of-frame Intra-chr q13.2 q13.13 Seq+ 87125 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAG9-FAM117A SPAG9 chr17 51120354 - FAM117A chr17 49720436 - Exonic hg38 BRCA TCGA-E9-A1RF-01A 37 78 In-Frame Intra-chr q21.33 q21.33 Seq+ 87126 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICAL1-AK9 MICAL1 chr6 109449970 - AK9 chr6 109497965 - Exonic hg38 BRCA TCGA-E9-A1RF-01A 23 78 Out-of-frame Intra-chr q21 q21 Seq+ 87127 ChimerSeq TCGA FAWG TCGA_RNA-Seq RWDD1-WASF1 RWDD1 chr6 116571655 + WASF1 chr6 110127629 - Exonic hg38 BRCA TCGA-E9-A1RF-01A 19 76 5'UTR-5'UTR Intra-chr q22.1 q21 Seq+ 87128 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAN1A1-PDSS2 MAN1A1 chr6 119348463 - PDSS2 chr6 107154777 - Exonic hg38 BRCA TCGA-E9-A1RF-01A 9 16 In-Frame Intra-chr q22.31 q21 Tumor suppressor gene Seq+ 87129 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSTM1-CEP85L OSTM1 chr6 108074250 - CEP85L chr6 118632611 - Exonic hg38 BRCA TCGA-E9-A1RF-01A 5 20 Out-of-frame Intra-chr q21 q22.31 Seq+ 87130 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRCIN1-FNDC8 SRCIN1 chr17 38561463 - FNDC8 chr17 35127042 + Exonic hg38 BRCA TCGA-E9-A1RF-01A 6 4 5'UTR-CDS Intra-chr q12 q12 Seq+ 87131 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC5-MSR1 HDAC5 chr17 44078597 - MSR1 chr8 16120606 - Exonic hg38 BRCA TCGA-E9-A1RF-01A 4 5 Out-of-frame Inter-chr q21.31 p22 Seq+ 87132 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIG3-ZFAT LIG3 chr17 34994431 + ZFAT chr8 134478721 - Exonic hg38 BRCA TCGA-E9-A1RF-01A 2 10 In-Frame Inter-chr q12 Tumor suppressor gene q24.22 Transcription factor Seq+ 87133 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDSS2-SOBP PDSS2 chr6 107334198 - SOBP chr6 107658207 + Exonic hg38 BRCA TCGA-E9-A1RF-01A 2 9 CDS-3'UTR Intra-chr q21 Tumor suppressor gene q21 Seq+ 87134 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLK2-SIGLEC9 TLK2 chr17 62600820 + SIGLEC9 chr19 51135962 + Exonic hg38 BRCA TCGA-E9-A1RF-01A 2 5 Out-of-frame Inter-chr q23.2 Other:TLK q13.41 Seq+ 87135 ChimerSeq TCGA FAWG TCGA_RNA-Seq AK9-FAM184A AK9 chr6 109641518 - FAM184A chr6 119024813 - Exonic hg38 BRCA TCGA-E9-A1RF-01A 1 7 In-Frame Intra-chr q21 q22.31 87136 ChimerSeq TCGA FAWG TCGA_RNA-Seq NR1H2-ZNF610 NR1H2 chr19 50329795 + ZNF610 chr19 52347707 + Exonic hg38 BRCA TCGA-E9-A1RF-01A 2 2 5'UTR-5'UTR Intra-chr q13.33 Transcription factor q13.41 Transcription factor 87137 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCAN-NR2F6 NCAN chr19 19212064 + NR2F6 chr19 17240765 - Exonic hg38 BRCA TCGA-E9-A1RG-01A 11 68 5'UTR-CDS Intra-chr p13.11 p13.11 Transcription factor Seq+ 87138 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R12B-TIMM17A PPP1R12B chr1 202443127 + TIMM17A chr1 201970188 + Exonic hg38 BRCA TCGA-E9-A1RG-01A 5 20 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 87139 ChimerSeq TCGA FAWG TCGA_RNA-Seq RMND1-SYNE1 RMND1 chr6 151445308 - SYNE1 chr6 152149668 - Exonic hg38 BRCA TCGA-E9-A1RG-01A 1 20 In-Frame Intra-chr q25.1 q25.2 Oncogene Seq+ 87140 ChimerSeq TCGA FAWG TCGA_RNA-Seq LINS1-WRAP53 LINS1 chr15 100602121 - WRAP53 chr17 7688648 + Exonic hg38 BRCA TCGA-E9-A1RG-01A 2 3 5'UTR-5'UTR Inter-chr q26.3 p13.1 87141 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX5-ART1 DDX5 chr17 64503430 - ART1 chr11 3664295 + Exonic hg38 BRCA TCGA-E9-A1RH-01A 49 218 CDS-3'UTR Inter-chr q23.3 p15.4 Tumor suppressor gene Seq+ 87142 ChimerSeq TCGA FAWG TCGA_RNA-Seq HK1-UTP23 HK1 chr10 69386418 + UTP23 chr8 116848888 + Exonic hg38 BRCA TCGA-E9-A1RH-01A 29 112 CDS-3'UTR Inter-chr q22.1 q24.11 87143 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARPC4-GRM7 ARPC4 chr3 9804013 + GRM7 chr3 7146452 + Exonic hg38 BRCA TCGA-E9-A1RH-01A 31 79 In-Frame Intra-chr p25.3 p26.1 Seq+ 87144 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCY9-GLYR1 ADCY9 chr16 3988994 - GLYR1 chr16 4812248 - Exonic hg38 BRCA TCGA-E9-A1RH-01A 14 84 In-Frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 87145 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA6-MAP3K20 ITGA6 chr2 172491523 + MAP3K20 chr2 173169805 + Exonic hg38 BRCA TCGA-E9-A1RH-01A 14 32 In-Frame Intra-chr q31.1 q31.1 87146 ChimerSeq TCGA FAWG TCGA_RNA-Seq DEPTOR-ENPP2 DEPTOR chr8 119965410 + ENPP2 chr8 119564955 - Exonic hg38 BRCA TCGA-E9-A1RH-01A 11 38 In-Frame Intra-chr q24.12 q24.12 Seq+ 87147 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMIZ1-CDPF1 ZMIZ1 chr10 79162133 + CDPF1 chr22 46245238 - Exonic hg38 BRCA TCGA-E9-A1RH-01A 8 50 5'UTR-CDS Inter-chr q22.3 q13.31 Seq+ 87148 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCU-NFIX MCU chr10 72692301 + NFIX chr19 13025021 + Exonic hg38 BRCA TCGA-E9-A1RH-01A 4 10 In-Frame Inter-chr q22.1 p13.13 Transcription factor Seq+ 87149 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFAM-ANK3 TFAM chr10 58390860 + ANK3 chr10 60068877 - Exonic hg38 BRCA TCGA-E9-A1RH-01A 3 11 Out-of-frame Intra-chr q21.1 q21.2 Seq+ 87150 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCBP3-PDHX PCBP3 chr21 45735429 + PDHX chr11 35020208 + Exonic hg38 BRCA TCGA-E9-A1RH-01A 2 5 5'UTR-3'UTR Inter-chr q22.3 p13 87151 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRDM16-BBX PRDM16 chr1 3069296 + BBX chr3 107645836 + Exonic hg38 BRCA TCGA-E9-A1RH-01A 1 6 CDS-5'UTR Inter-chr p36.32 Transcription factor q13.12 Transcription factor Seq+ 87152 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF678-DNAH7 ZNF678 chr1 227563724 + DNAH7 chr2 195926566 - Exonic hg38 BRCA TCGA-E9-A1RI-01A 1 2 In-Frame Inter-chr q42.13 Transcription factor q32.3 87153 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2C-EMP1 KMT2C chr7 152220523 - EMP1 chr12 13211469 + Exonic hg38 BRCA TCGA-E9-A227-01A 1 3 CDS-5'UTR Inter-chr q36.1 Oncogene Tumor suppressor gene p13.1 Tumor suppressor gene 87154 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRTOMT-FOLR1 LRTOMT chr11 72080885 + FOLR1 chr11 72189665 + Exonic hg38 BRCA TCGA-E9-A228-01A 125 219 5'UTR-5'UTR Intra-chr q13.4 q13.4 Seq+ 87155 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGAP1-SPAG16 PGAP1 chr2 196916418 - SPAG16 chr2 214410140 + Exonic hg38 BRCA TCGA-E9-A228-01A 34 175 Out-of-frame Intra-chr q33.1 q34 Seq+ 87156 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK1-FLOT2 TAOK1 chr17 29391024 + FLOT2 chr17 28889026 - Exonic hg38 BRCA TCGA-E9-A228-01A 15 55 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 87157 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSI2-TEX2 MSI2 chr17 57262192 + TEX2 chr17 64214242 - Exonic hg38 BRCA TCGA-E9-A228-01A 18 41 CDS-5'UTR Intra-chr q22 q23.3 Seq+ 87158 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPF2-PSMD11 WIPF2 chr17 40273999 + PSMD11 chr17 32479251 + Exonic hg38 BRCA TCGA-E9-A228-01A 5 57 Out-of-frame Intra-chr q21.2 q11.2 Seq+ 87159 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASC3-MED1 CASC3 chr17 40141607 + MED1 chr17 39427790 - Exonic hg38 BRCA TCGA-E9-A228-01A 8 32 Out-of-frame Intra-chr q21.1 q12 Tumor suppressor gene Seq+ 87160 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO1-UNC5D ANO1 chr11 70171039 + UNC5D chr8 35549292 + Exonic hg38 BRCA TCGA-E9-A228-01A 11 19 In-Frame Inter-chr q13.3 p12 Tumor suppressor gene Seq+ 87161 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT6B-DDX4 KAT6B chr10 74989112 + DDX4 chr5 55738950 + Exonic hg38 BRCA TCGA-E9-A228-01A 10 15 3'UTR-5'UTR Inter-chr Oncogene q11.2 Seq+ 87162 ChimerSeq TCGA FAWG TCGA_RNA-Seq MFSD6-GLS MFSD6 chr2 190437561 + GLS chr2 190895152 + Exonic hg38 BRCA TCGA-E9-A228-01A 5 31 In-Frame Intra-chr q32.2 q32.2 Tumor suppressor gene Seq+ 87163 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNF1B-CASC3 HNF1B chr17 37687017 - CASC3 chr17 40140521 + Exonic hg38 BRCA TCGA-E9-A228-01A 8 6 Out-of-frame Intra-chr q12 Transcription factor q21.1 Seq+ 87164 ChimerSeq TCGA FAWG TCGA_RNA-Seq CWC25-MED24 CWC25 chr17 38820901 - MED24 chr17 40053635 - Exonic hg38 BRCA TCGA-E9-A228-01A 3 13 5'UTR-5'UTR Intra-chr q12 q21.1 Seq+ 87165 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC27-USP32 CDC27 chr17 47157230 - USP32 chr17 60301704 - Exonic hg38 BRCA TCGA-E9-A228-01A 2 15 In-Frame Intra-chr q21.32 q23.2 Seq+ 87166 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPB1-MGP CPB1 chr3 148841924 + MGP chr12 14882280 - Exonic hg38 BRCA TCGA-E9-A228-01A 1 12 Out-of-frame Inter-chr q24 p12.3 87167 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATE1-ZRANB1 ATE1 chr10 121922349 - ZRANB1 chr10 124981709 + Exonic hg38 BRCA TCGA-E9-A229-01A 27 43 In-Frame Intra-chr q26.13 q26.13 Seq+ 87168 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCDH15-DUSP13 PCDH15 chr10 54317271 - DUSP13 chr10 75104097 - Exonic hg38 BRCA TCGA-E9-A229-01A 1 34 CDS-5'UTR Intra-chr q21.1 q22.2 Seq+ 87169 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLG5-PCDH15 DLG5 chr10 77926217 - PCDH15 chr10 54527877 - Exonic hg38 BRCA TCGA-E9-A229-01A 2 15 5'UTR-CDS Intra-chr q22.3 q21.1 Seq+ 87170 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC92B-PACRG CCDC92B chr17 2735016 - PACRG chr6 163314827 + Exonic hg38 BRCA TCGA-E9-A229-01A 2 13 In-Frame Inter-chr p13.3 q26 Tumor suppressor gene 87171 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR157-GON4L GPR157 chr1 9128645 - GON4L chr1 155785374 - Exonic hg38 BRCA TCGA-E9-A229-01A 3 6 Out-of-frame Intra-chr p36.22 q22 Seq+ 87172 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL1A1-MMP2 COL1A1 chr17 50194349 - MMP2 chr16 55491801 + Exonic hg38 BRCA TCGA-E9-A229-01A 1 10 Out-of-frame Inter-chr q21.33 Oncogene q12.2 Oncogene 87173 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDSS2-LMBRD1 PDSS2 chr6 107274029 - LMBRD1 chr6 69719081 - Exonic hg38 BRCA TCGA-E9-A229-01A 2 2 In-Frame Intra-chr q21 Tumor suppressor gene q13 Seq+ 87174 ChimerSeq TCGA FAWG TCGA_RNA-Seq C12orf45-RIC8B C12orf45 chr12 104996026 + RIC8B chr12 106783997 + Exonic hg38 BRCA TCGA-E9-A229-01A 1 5 3'UTR-CDS Intra-chr q23.3 q23.3 87175 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAU1-PREX1 STAU1 chr20 49151582 - PREX1 chr20 48747880 - Exonic hg38 BRCA TCGA-E9-A229-01A 1 5 In-Frame Intra-chr q13.13 q13.13 87176 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFRKB-NOX4 NFRKB chr11 129885435 - NOX4 chr11 89402542 - Exonic hg38 BRCA TCGA-E9-A229-01A 1 4 Out-of-frame Intra-chr q24.3 q14.3 Seq+ 87177 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1191-FAF2 KIAA1191 chr5 176361602 - FAF2 chr5 176506768 + Exonic hg38 BRCA TCGA-E9-A229-01A 1 1 5'UTR-CDS Intra-chr q35.2 q35.2 87178 ChimerSeq TCGA FAWG TCGA_RNA-Seq RMDN1-AKAP6 RMDN1 chr8 86474820 - AKAP6 chr14 32829848 + Exonic hg38 BRCA TCGA-E9-A22A-01A 17 77 CDS-3'UTR Inter-chr q21.3 q12 Seq+ 87179 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWP1-NUBPL WWP1 chr8 86381629 + NUBPL chr14 31826629 + Exonic hg38 BRCA TCGA-E9-A22A-01A 4 49 In-Frame Inter-chr q21.3 q12 Seq+ 87180 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDGFB-RPL3 PDGFB chr22 39231622 - RPL3 chr22 39318592 - Exonic hg38 BRCA TCGA-E9-A22A-01A 8 16 In-Frame Intra-chr q13.1 Oncogene q13.1 Seq+ 87181 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPATA6-MAD2L2 SPATA6 chr1 48451552 - MAD2L2 chr1 11676948 - Exonic hg38 BRCA TCGA-E9-A22A-01A 4 12 Out-of-frame Intra-chr p33 p36.22 Seq+ 87182 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKL2-CACNA1H MKL2 chr16 14140760 + CACNA1H chr16 1200256 + Exonic hg38 BRCA TCGA-E9-A22A-01A 2 4 Out-of-frame Intra-chr p13.12 p13.3 Seq+ 87183 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIMS2-ODF1 RIMS2 chr8 103501062 + ODF1 chr8 102560452 + Exonic hg38 BRCA TCGA-E9-A22B-01A 32 76 In-Frame Intra-chr q22.3 q22.3 Seq+ 87184 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKN2-VAV3 PKN2 chr1 88813733 + VAV3 chr1 107669472 - Exonic hg38 BRCA TCGA-E9-A22B-01A 1 3 Out-of-frame Intra-chr p22.2 AGC:PKN p13.3 87185 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERPINA5-CPB1 SERPINA5 chr14 94593120 + CPB1 chr3 148840692 + Exonic hg38 BRCA TCGA-E9-A22B-01A 1000 1000 Out-of-frame Inter-chr q32.13 q24 87186 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA3-CPB1 ITGA3 chr17 50090080 + CPB1 chr3 148844506 + Exonic hg38 BRCA TCGA-E9-A22B-01A 1000 1000 Out-of-frame Inter-chr q21.33 q24 87187 ChimerSeq TCGA FAWG TCGA_RNA-Seq UAP1-TSHZ2 UAP1 chr1 162581459 + TSHZ2 chr20 53487144 + Exonic hg38 BRCA TCGA-E9-A22D-01A 125 1001 CDS-3'UTR Inter-chr q23.3 q13.2 Transcription factor Seq+ 87188 ChimerSeq TCGA FAWG TCGA_RNA-Seq BPTF-RGS9 BPTF chr17 67854762 + RGS9 chr17 65168200 + Exonic hg38 BRCA TCGA-E9-A22D-01A 118 349 In-Frame Intra-chr q24.2 Transcription factor q24.1 Seq+ 87189 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHLDA3-MYBPH PHLDA3 chr1 201468341 - MYBPH chr1 203170450 - Exonic hg38 BRCA TCGA-E9-A22D-01A 19 127 3'UTR-CDS Intra-chr q32.1 Tumor suppressor gene q32.1 Seq+ 87190 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR181A1HG-BCAS1 MIR181A1HG chr1 198900411 - BCAS1 chr20 53957497 - Exonic hg38 BRCA TCGA-E9-A22D-01A 23 79 3'UTR-CDS Inter-chr q32.1 q13.2 Seq+ 87191 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDF2-MAP2K6 SDF2 chr17 28655287 - MAP2K6 chr17 69536115 + Exonic hg38 BRCA TCGA-E9-A22D-01A 22 69 Out-of-frame Intra-chr q11.2 q24.3 STE:STE7 Seq+ 87192 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF6-SERINC3 ATF6 chr1 161863312 + SERINC3 chr20 44501300 - Exonic hg38 BRCA TCGA-E9-A22D-01A 25 39 Out-of-frame Inter-chr q23.3 Transcription factor q13.12 Seq+ 87193 ChimerSeq TCGA FAWG TCGA_RNA-Seq HELZ2-ADA HELZ2 chr20 63572108 - ADA chr20 44636288 - Exonic hg38 BRCA TCGA-E9-A22D-01A 16 48 Out-of-frame Intra-chr q13.33 q13.12 Seq+ 87194 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPO1-HORMAD1 XPO1 chr2 61498673 - HORMAD1 chr1 150719538 - Exonic hg38 BRCA TCGA-E9-A22D-01A 12 61 CDS-5'UTR Inter-chr p15 Oncogene q21.3 Seq+ 87195 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC13-JAK2 TTC13 chr1 230939386 - JAK2 chr9 5064883 + Exonic hg38 BRCA TCGA-E9-A22D-01A 14 52 In-Frame Inter-chr q42.2 p24.1 TK:JakA Oncogene Seq+ 87196 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRNIP-SLC36A4 MRNIP chr5 179840872 - SLC36A4 chr11 93154200 - Exonic hg38 BRCA TCGA-E9-A22D-01A 11 63 5'UTR-CDS Inter-chr q21 87197 ChimerSeq TCGA FAWG TCGA_RNA-Seq VMP1-DHCR7 VMP1 chr17 59841324 + DHCR7 chr11 71441441 - Exonic hg38 BRCA TCGA-E9-A22D-01A 8 48 Out-of-frame Inter-chr q23.1 q13.4 Seq+ 87198 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICU2-ATP8A2 MICU2 chr13 21603939 - ATP8A2 chr13 25828118 + Exonic hg38 BRCA TCGA-E9-A22D-01A 16 14 In-Frame Intra-chr q12.11 q12.13 Seq+ 87199 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC90B-PLXDC1 CCDC90B chr11 83273647 - PLXDC1 chr17 39109391 - Exonic hg38 BRCA TCGA-E9-A22D-01A 7 34 In-Frame Inter-chr q14.1 q12 Seq+ 87200 ChimerSeq TCGA FAWG TCGA_RNA-Seq UAP1-PTRH2 UAP1 chr1 162581459 + PTRH2 chr17 59674821 - Exonic hg38 BRCA TCGA-E9-A22D-01A 5 35 CDS-3'UTR Inter-chr q23.3 q23.1 Seq+ 87201 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARSG-MAP2K6 ARSG chr17 68307087 + MAP2K6 chr17 69505780 + Exonic hg38 BRCA TCGA-E9-A22D-01A 8 21 5'UTR-5'UTR Intra-chr q24.2 q24.3 STE:STE7 Seq+ 87202 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR21-DHCR7 MIR21 chr17 59841324 + DHCR7 chr11 71441441 - Exonic hg38 BRCA TCGA-E9-A22D-01A 8 20 Out-of-frame Inter-chr q23.1 q13.4 Seq+ 87203 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBX1-DHX40 PBX1 chr1 164563311 + DHX40 chr17 59602522 + Exonic hg38 BRCA TCGA-E9-A22D-01A 3 33 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor q23.1 Seq+ 87204 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACACA-ASIC2 ACACA chr17 37257703 - ASIC2 chr17 33017684 - Exonic hg38 BRCA TCGA-E9-A22D-01A 5 15 5'UTR-CDS Intra-chr q12 Seq+ 87205 ChimerSeq TCGA FAWG TCGA_RNA-Seq UFC1-ANO1 UFC1 chr1 161154120 + ANO1 chr11 70167242 + Exonic hg38 BRCA TCGA-E9-A22D-01A 4 13 Out-of-frame Inter-chr q23.3 q13.3 Seq+ 87206 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMP2K-SLC4A4 BMP2K chr4 78851056 + SLC4A4 chr4 71486948 + Exonic hg38 BRCA TCGA-E9-A22D-01A 3 10 In-Frame Intra-chr q21.21 q13.3 Seq+ 87207 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS72-TSHZ2 VPS72 chr1 151184317 - TSHZ2 chr20 53487144 + Exonic hg38 BRCA TCGA-E9-A22D-01A 3 8 CDS-3'UTR Inter-chr q21.3 q13.2 Transcription factor Seq+ 87208 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K1-PARN MAP3K1 chr5 56816055 + PARN chr16 14447081 - Exonic hg38 BRCA TCGA-E9-A22E-01A 16 14 CDS-5'UTR Inter-chr q11.2 STE:STE11 Oncogene Seq+ 87209 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADIPOR1-CYB5R1 ADIPOR1 chr1 202958185 - CYB5R1 chr1 202963727 - Exonic hg38 BRCA TCGA-E9-A22E-01A 9 14 5'UTR-CDS Intra-chr q32.1 q32.1 Seq+ 87210 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNC1-KHDRBS3 PITPNC1 chr17 67675542 + KHDRBS3 chr8 135648540 + Exonic hg38 BRCA TCGA-E9-A22E-01A 2 10 CDS-3'UTR Inter-chr q24.2 q24.23 Seq+ 87211 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLNS1A-GAB2 CLNS1A chr11 77637590 - GAB2 chr11 78227051 - Exonic hg38 BRCA TCGA-E9-A22E-01A 1 1 In-Frame Intra-chr q14.1 q14.1 Seq+ 87212 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZWILCH-ATG16L2 ZWILCH chr15 66533013 + ATG16L2 chr11 72842617 + Exonic hg38 BRCA TCGA-E9-A22G-01A 9 30 CDS-3'UTR Inter-chr q22.31 q13.4 Seq+ 87213 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB10-SLC2A13 GRB10 chr7 50703821 - SLC2A13 chr12 39760252 - Exonic hg38 BRCA TCGA-E9-A22G-01A 6 10 In-Frame Inter-chr p12.1 q12 Seq+ 87214 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTK2-SLC30A8 PTK2 chr8 140686632 - SLC30A8 chr8 117006991 + Exonic hg38 BRCA TCGA-E9-A22G-01A 1 14 CDS-5'UTR Intra-chr q24.3 q24.11 87215 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPS1-CHRAC1 TRPS1 chr8 115667874 - CHRAC1 chr8 140514369 + Exonic hg38 BRCA TCGA-E9-A22G-01A 2 5 Out-of-frame Intra-chr q23.3 Transcription factor q24.3 87216 ChimerSeq TCGA FAWG TCGA_RNA-Seq STOM-IDE STOM chr9 121370127 - IDE chr10 92461252 - Exonic hg38 BRCA TCGA-E9-A22G-01A 1 4 In-Frame Inter-chr q33.2 q23.33 87217 ChimerSeq TCGA FAWG TCGA_RNA-Seq FHOD3-MOCOS FHOD3 chr18 36298000 + MOCOS chr18 36195257 + Exonic hg38 BRCA TCGA-E9-A22G-01A 1 2 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 87218 ChimerSeq TCGA FAWG TCGA_RNA-Seq ORC6-VPS35 ORC6 chr16 46691120 + VPS35 chr16 46683606 - Exonic hg38 BRCA TCGA-E9-A22H-01A 8 8 In-Frame Intra-chr q11.2 q11.2 Seq+ 87219 ChimerSeq TCGA FAWG TCGA_RNA-Seq EVA1C-HUNK EVA1C chr21 32467848 + HUNK chr21 31946036 + Exonic hg38 BRCA TCGA-E9-A22H-01A 1 6 In-Frame Intra-chr q22.11 q22.11 CAMK:CAMKL 87220 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADIPOR1-RGS8 ADIPOR1 chr1 202943758 - RGS8 chr1 182648303 - Exonic hg38 BRCA TCGA-E9-A243-01A 23 73 In-Frame Intra-chr q32.1 q25.3 Seq+ 87221 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSH2-DTD1 SSH2 chr17 29793894 - DTD1 chr20 18744100 + Exonic hg38 BRCA TCGA-E9-A243-01A 19 81 Out-of-frame Inter-chr q11.2 p11.23 Seq+ 87222 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAD2-PODXL ATAD2 chr8 123339311 - PODXL chr7 131511433 - Exonic hg38 BRCA TCGA-E9-A243-01A 10 46 In-Frame Inter-chr q24.13 q32.3 Seq+ 87223 ChimerSeq TCGA FAWG TCGA_RNA-Seq HILPDA-SND1 HILPDA chr7 128456023 + SND1 chr7 128089489 + Exonic hg38 BRCA TCGA-E9-A243-01A 11 40 5'UTR-CDS Intra-chr q32.1 q32.1 Seq+ 87224 ChimerSeq TCGA FAWG TCGA_RNA-Seq WARS2-TPST1 WARS2 chr1 119076350 - TPST1 chr7 66352505 + Exonic hg38 BRCA TCGA-E9-A243-01A 3 29 In-Frame Inter-chr p12 q11.21 Seq+ 87225 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIMCH1-UCHL1 LIMCH1 chr4 41359803 + UCHL1 chr4 41267987 + Exonic hg38 BRCA TCGA-E9-A243-01A 1 17 5'UTR-CDS Intra-chr p13 p13 Tumor suppressor gene Seq+ 87226 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFYC-SLC15A3 NFYC chr1 40691867 + SLC15A3 chr11 60946821 - Exonic hg38 BRCA TCGA-E9-A243-01A 2 5 5'UTR-CDS Inter-chr p34.2 Transcription factor q12.2 Seq+ 87227 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFI16-GOLPH3L IFI16 chr1 159000395 + GOLPH3L chr1 150663763 - Exonic hg38 BRCA TCGA-E9-A243-01A 2 1 5'UTR-CDS Intra-chr q23.1 Tumor suppressor gene q21.3 87228 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCM5-TOM1 MCM5 chr22 35408563 + TOM1 chr22 35327271 + Exonic hg38 BRCA TCGA-E9-A243-01A 1 5 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 87229 ChimerSeq TCGA FAWG TCGA_RNA-Seq VTCN1-NUP88 VTCN1 chr1 117153091 - NUP88 chr17 5388960 - Exonic hg38 BRCA TCGA-E9-A244-01A 70 138 Out-of-frame Inter-chr p12 p13.2 Seq+ 87230 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNND1-DDAH2 CTNND1 chr11 57762046 + DDAH2 chr6 31728745 - Exonic hg38 BRCA TCGA-E9-A244-01A 31 104 5'UTR-5'UTR Inter-chr q12.1 Tumor suppressor gene Seq+ 87231 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF168-SMCO1 RNF168 chr3 196502873 - SMCO1 chr3 196508331 - Exonic hg38 BRCA TCGA-E9-A244-01A 23 59 Out-of-frame Intra-chr q29 q29 Seq+ 87232 ChimerSeq TCGA FAWG TCGA_RNA-Seq VGLL1-CD40LG VGLL1 chrX 136550821 + CD40LG chrX 136659039 + Exonic hg38 BRCA TCGA-E9-A244-01A 18 41 In-Frame Intra-chr q26.3 q26.3 Seq+ 87233 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMD8-C10orf11 SAMD8 chr10 75151106 + C10orf11 chr10 76036008 + Exonic hg38 BRCA TCGA-E9-A244-01A 7 20 Out-of-frame Intra-chr q22.2 Seq+ 87234 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSDE1-DENND2C CSDE1 chr1 114749821 - DENND2C chr1 114626188 - Exonic hg38 BRCA TCGA-E9-A244-01A 8 8 5'UTR-5'UTR Intra-chr p13.2 p13.2 Seq+ 87235 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND4C-NFIL3 DENND4C chr9 19230833 + NFIL3 chr9 91410906 - Exonic hg38 BRCA TCGA-E9-A244-01A 4 13 5'UTR-5'UTR Intra-chr p22.1 q22.31 Transcription factor Seq+ 87236 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOSC10-MTOR EXOSC10 chr1 11080499 - MTOR chr1 11117086 - Exonic hg38 BRCA TCGA-E9-A244-01A 5 3 Out-of-frame Intra-chr p36.22 p36.22 Oncogene Seq+ 87237 ChimerSeq TCGA FAWG TCGA_RNA-Seq GABRP-KCNIP1 GABRP chr5 170789247 + KCNIP1 chr5 170720321 + Exonic hg38 BRCA TCGA-E9-A244-01A 3 11 Out-of-frame Intra-chr q35.1 q35.1 Seq+ 87238 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAF3-RCOR1 TRAF3 chr14 102876525 + RCOR1 chr14 102707351 + Exonic hg38 BRCA TCGA-E9-A244-01A 3 6 In-Frame Intra-chr q32.32 q32.31 Seq+ 87239 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN15-SAMD8 TSPAN15 chr10 69451690 + SAMD8 chr10 75164645 + Exonic hg38 BRCA TCGA-E9-A244-01A 2 9 Out-of-frame Intra-chr q22.1 q22.2 Seq+ 87240 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM3C-SUSD2 FAM3C chr7 121371300 - SUSD2 chr22 24185094 + Exonic hg38 BRCA TCGA-E9-A247-01A 24 80 In-Frame Inter-chr q31.31 q11.23 Seq+ 87241 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOX3-PHKB TOX3 chr16 52546637 - PHKB chr16 47610826 + Exonic hg38 BRCA TCGA-E9-A247-01A 17 79 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 87242 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1671-C16orf87 KIAA1671 chr22 25112462 + C16orf87 chr16 46824482 - Exonic hg38 BRCA TCGA-E9-A247-01A 3 36 CDS-3'UTR Inter-chr q11.23 q11.2 87243 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAS-CTNND2 FAS chr10 89003194 + CTNND2 chr5 11022979 - Exonic hg38 BRCA TCGA-E9-A247-01A 1 4 In-Frame Inter-chr q23.31 Oncogene Tumor suppressor gene p15.2 Seq+ 87244 ChimerSeq TCGA FAWG TCGA_RNA-Seq LTV1-ATG5 LTV1 chr6 143846224 + ATG5 chr6 106202089 - Exonic hg38 BRCA TCGA-E9-A248-01A 139 337 In-Frame Intra-chr q24.2 q21 Seq+ 87245 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1B-PLEKHG1 ARID1B chr6 156935576 + PLEKHG1 chr6 150768638 + Exonic hg38 BRCA TCGA-E9-A248-01A 29 220 In-Frame Intra-chr q25.3 Oncogene q25.1 Seq+ 87246 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNJ2-ZDHHC14 SYNJ2 chr6 157982088 + ZDHHC14 chr6 157542585 + Exonic hg38 BRCA TCGA-E9-A248-01A 35 96 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 87247 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D32-CCDC162P TBC1D32 chr6 121279121 - CCDC162P chr6 109183927 + Exonic hg38 BRCA TCGA-E9-A248-01A 6 22 CDS-5'UTR Intra-chr q22.31 q21 87248 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIVEP2-MTHFD1L HIVEP2 chr6 142945944 - MTHFD1L chr6 151034493 + Exonic hg38 BRCA TCGA-E9-A248-01A 4 20 5'UTR-5'UTR Intra-chr q24.2 Transcription factor q25.1 87249 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIN28B-USP45 LIN28B chr6 104958286 + USP45 chr6 99476230 - Exonic hg38 BRCA TCGA-E9-A248-01A 3 17 Out-of-frame Intra-chr q16.3 Transcription factor q16.2 Seq+ 87250 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLD3-SIRT2 PLD3 chr19 40348768 + SIRT2 chr19 38893867 - Exonic hg38 BRCA TCGA-E9-A248-01A 3 13 5'UTR-5'UTR Intra-chr q13.2 Tumor suppressor gene Seq+ 87251 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNJ2-CDK19 SYNJ2 chr6 158066635 + CDK19 chr6 110746201 - Exonic hg38 BRCA TCGA-E9-A248-01A 3 9 Out-of-frame Intra-chr q25.3 q21 Seq+ 87252 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM208B-NET1 FAM208B chr10 5761471 + NET1 chr10 5429170 + Exonic hg38 BRCA TCGA-E9-A248-01A 1 12 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 87253 ChimerSeq TCGA FAWG TCGA_RNA-Seq C10orf76-PRKG1 C10orf76 chr10 102056085 - PRKG1 chr10 52271350 + Exonic hg38 BRCA TCGA-E9-A248-01A 2 5 Out-of-frame Intra-chr q24.32 q11.23 Seq+ 87254 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP18-CEP85L ARHGAP18 chr6 129710024 - CEP85L chr6 118664521 - Exonic hg38 BRCA TCGA-E9-A248-01A 1 6 CDS-5'UTR Intra-chr q22.33 q22.31 87255 ChimerSeq TCGA FAWG TCGA_RNA-Seq KATNAL1-WASF3 KATNAL1 chr13 30307331 - WASF3 chr13 26667517 + Exonic hg38 BRCA TCGA-E9-A248-01A 1 6 5'UTR-CDS Intra-chr q12.3 q12.13 Seq+ 87256 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTHFD1L-THEMIS MTHFD1L chr6 150866049 + THEMIS chr6 127855188 - Exonic hg38 BRCA TCGA-E9-A248-01A 2 2 5'UTR-5'UTR Intra-chr q25.1 Seq+ 87257 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIAM1-NRIP1 TIAM1 chr21 31266010 - NRIP1 chr21 14968526 - Exonic hg38 BRCA TCGA-E9-A248-01A 1 6 CDS-5'UTR Intra-chr q22.11 q21.1 KB Pub Seq+ 87258 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHG1-SAMD5 PLEKHG1 chr6 150768737 + SAMD5 chr6 147564393 + Exonic hg38 BRCA TCGA-E9-A248-01A 1000 1000 Out-of-frame Intra-chr q25.1 q24.3 87259 ChimerSeq TCGA FAWG TCGA_RNA-Seq UMAD1-MRAP UMAD1 chr7 7673453 + MRAP chr21 32306640 + Exonic hg38 BRCA TCGA-E9-A295-01A 15 20 In-Frame Inter-chr p21.3 q22.11 87260 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF14-RGL3 ZNF14 chr19 19732956 - RGL3 chr19 11402706 - Exonic hg38 BRCA TCGA-E9-A295-01A 2 7 In-Frame Intra-chr p13.11 Transcription factor p13.2 Seq+ 87261 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD59-CSTF3 CD59 chr11 33710206 - CSTF3 chr11 33141986 - Exonic hg38 BRCA TCGA-E9-A295-01A 2 3 In-Frame Intra-chr p13 p13 87262 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAK1-CRNDE TRAK1 chr3 42125614 + CRNDE chr16 54853568 - Exonic hg38 BRCA TCGA-E9-A2JS-01A 12 137 CDS-3'UTR Inter-chr p22.1 q12.2 87263 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTP4A1-EYS PTP4A1 chr6 63576985 + EYS chr6 64822822 - Exonic hg38 BRCA TCGA-E9-A2JS-01A 3 5 Out-of-frame Intra-chr q12 q12 Seq+ 87264 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAGLN2-PBX1 TAGLN2 chr1 159919274 - PBX1 chr1 164682310 + Exonic hg38 BRCA TCGA-E9-A3HO-01A 1 15 Out-of-frame Intra-chr q23.2 q23.3 Oncogene Transcription factor 87265 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAI-TOX3 SCAI chr9 125142633 - TOX3 chr16 52450546 - Exonic hg38 BRCA TCGA-E9-A3HO-01A 2 8 Out-of-frame Inter-chr q33.3 q12.1 Seq+ 87266 ChimerSeq TCGA FAWG TCGA_RNA-Seq NECTIN2-NOC4L NECTIN2 chr19 44846613 + NOC4L chr12 132150981 + Exonic hg38 BRCA TCGA-E9-A3HO-01A 1 1 In-Frame Inter-chr q13.32 q24.33 87267 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAA15-SLC10A7 NAA15 chr4 139370404 + SLC10A7 chr4 146258837 - Exonic hg38 BRCA TCGA-E9-A3Q9-01A 5 11 Out-of-frame Intra-chr q31.1 q31.22 Seq+ 87268 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCUR1-S100A10 MCUR1 chr6 13800341 - S100A10 chr1 151986251 - Exonic hg38 BRCA TCGA-E9-A3QA-01A 41 149 CDS-5'UTR Inter-chr p23 q21.3 Seq+ 87269 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRM-KCTD1 PTPRM chr18 7926683 + KCTD1 chr18 26459925 - Exonic hg38 BRCA TCGA-E9-A3QA-01A 1 16 In-Frame Intra-chr p11.23 q11.2 Seq+ 87270 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD9A-SSH3 RAD9A chr11 67321333 + SSH3 chr11 67309397 + Exonic hg38 BRCA TCGA-E9-A3QA-01A 1 14 5'UTR-CDS Intra-chr q13.2 q13.2 87271 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXLNB-CDC14A TXLNB chr6 139276830 - CDC14A chr1 100484292 + Exonic hg38 BRCA TCGA-E9-A3QA-01A 2 8 Out-of-frame Inter-chr q24.1 p21.2 Seq+ 87272 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCZ1-ZNF815P CCZ1 chr7 5919966 + ZNF815P chr7 5833527 + Exonic hg38 BRCA TCGA-E9-A3QA-01A 1 10 CDS-5'UTR Intra-chr p22.1 p22.1 87273 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFX1-SPINK4 NFX1 chr9 33319127 + SPINK4 chr9 33218365 + Exonic hg38 BRCA TCGA-E9-A3QA-01A 1 7 CDS-5'UTR Intra-chr p13.3 Transcription factor p13.3 Seq+ 87274 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIST4H4-PCCB HIST4H4 chr12 14770679 - PCCB chr3 136283837 + Exonic hg38 BRCA TCGA-E9-A3QA-01A 1 3 3'UTR-CDS Inter-chr p12.3 q22.3 87275 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOCAD-GGT5 FOCAD chr9 20929596 + GGT5 chr22 24234004 - Exonic hg38 BRCA TCGA-E9-A54X-01A 6 10 In-Frame Inter-chr p21.3 q11.23 Seq+ 87276 ChimerSeq TCGA FAWG TCGA_RNA-Seq CARTPT-MCCC2 CARTPT chr5 71719963 + MCCC2 chr5 71641003 + Exonic hg38 BRCA TCGA-E9-A54X-01A 2 7 In-Frame Intra-chr q13.2 q13.2 Seq+ 87277 ChimerSeq TCGA FAWG TCGA_RNA-Seq GINS4-UQCRC2 GINS4 chr8 41530298 + UQCRC2 chr16 21983088 + Exonic hg38 BRCA TCGA-E9-A54Y-01A 8 44 CDS-5'UTR Inter-chr p11.21 Seq+ 87278 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHCYL1-DENND2D AHCYL1 chr1 109985172 + DENND2D chr1 111194726 - Exonic hg38 BRCA TCGA-E9-A5FK-01A 3 6 In-Frame Intra-chr p13.3 Tumor suppressor gene p13.2 Tumor suppressor gene Seq+ 87279 ChimerSeq TCGA FAWG TCGA_RNA-Seq PMM2-UBFD1 PMM2 chr16 8813106 + UBFD1 chr16 23562206 + Exonic hg38 BRCA TCGA-E9-A5FL-01A 5 54 In-Frame Intra-chr p13.2 p12.2 Seq+ 87280 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK3-POLR2K STK3 chr8 98825515 - POLR2K chr8 100151347 + Exonic hg38 BRCA TCGA-E9-A5FL-01A 4 9 CDS-5'UTR Intra-chr q22.2 q22.2 Seq+ 87281 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKL2-SHISA9 MKL2 chr16 14079354 + SHISA9 chr16 13203394 + Exonic hg38 BRCA TCGA-E9-A5FL-01A 2 5 Out-of-frame Intra-chr p13.12 p13.12 Seq+ 87282 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASP7-VTI1A CASP7 chr10 113697603 + VTI1A chr10 112527087 + Exonic hg38 BRCA TCGA-E9-A5FL-01A 2 4 Out-of-frame Intra-chr q25.3 q25.2 Seq+ 87283 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR155-CHRNA1 GPR155 chr2 174461402 - CHRNA1 chr2 174784869 - Exonic hg38 BRCA TCGA-E9-A5FL-01A 2 4 CDS-5'UTR Intra-chr q31.1 q31.1 87284 ChimerSeq TCGA FAWG TCGA_RNA-Seq GGH-ZFAND1 GGH chr8 63017493 - ZFAND1 chr8 81718224 - Exonic hg38 BRCA TCGA-E9-A5FL-01A 1 1 In-Frame Intra-chr q12.3 q21.13 87285 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2B1-KCNC2 ATP2B1 chr12 89611193 - KCNC2 chr12 75048317 - Exonic hg38 BRCA TCGA-E9-A5UO-01A 4 34 Out-of-frame Intra-chr q21.33 q21.1 Seq+ 87286 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN1-HMGCLL1 ATXN1 chr6 16485972 - HMGCLL1 chr6 55542140 - Exonic hg38 BRCA TCGA-E9-A5UO-01A 5 25 5'UTR-5'UTR Intra-chr p22.3 p12.1 Seq+ 87287 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETFA-STRA6 ETFA chr15 76274412 - STRA6 chr15 74202282 - Exonic hg38 BRCA TCGA-E9-A5UO-01A 2 25 In-Frame Intra-chr q24.3 q24.1 Seq+ 87288 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGD6-NUP37 FGD6 chr12 95152811 - NUP37 chr12 102085856 - Exonic hg38 BRCA TCGA-E9-A5UO-01A 4 12 Out-of-frame Intra-chr q22 q23.2 Seq+ 87289 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENPP5-EPYC ENPP5 chr6 46165387 - EPYC chr12 90964326 - Exonic hg38 BRCA TCGA-E9-A5UO-01A 4 8 Out-of-frame Inter-chr p21.1 q21.33 Seq+ 87290 ChimerSeq TCGA FAWG TCGA_RNA-Seq CIC-MEGF8 CIC chr19 42274264 + MEGF8 chr19 42351216 + Exonic hg38 BRCA TCGA-E9-A5UO-01A 1000 1000 Out-of-frame Intra-chr q13.2 Oncogene Tumor suppressor gene Transcription factor q13.2 87291 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNFX1-CNBD2 ZNFX1 chr20 49269942 - CNBD2 chr20 35972629 + Exonic hg38 BRCA TCGA-E9-A5UP-01A 3 5 Out-of-frame Intra-chr q13.13 q11.23 Seq+ 87292 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG2A-NRXN2 ATG2A chr11 64901962 - NRXN2 chr11 64713943 - Exonic hg38 BRCA TCGA-EW-A1IW-01A 111 255 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 87293 ChimerSeq TCGA FAWG TCGA_RNA-Seq MS4A7-ATG2A MS4A7 chr11 60383288 + ATG2A chr11 64914500 - Exonic hg38 BRCA TCGA-EW-A1IW-01A 24 32 In-Frame Intra-chr q12.2 q13.1 Seq+ 87294 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDHAF2-MAJIN SDHAF2 chr11 61438113 + MAJIN chr11 64960135 - Exonic hg38 BRCA TCGA-EW-A1IW-01A 9 35 CDS-5'UTR Intra-chr q12.2 q13.1 87295 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPCN2-RARA TPCN2 chr11 69062990 + RARA chr17 40330857 + Exonic hg38 BRCA TCGA-EW-A1IW-01A 7 21 CDS-5'UTR Inter-chr q13.3 q21.2 Oncogene Transcription factor Seq+ 87296 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZRANB2-MTUS2 ZRANB2 chr1 71080940 - MTUS2 chr13 29024457 + Exonic hg38 BRCA TCGA-EW-A1IW-01A 7 5 CDS-5'UTR Inter-chr p31.1 q12.3 87297 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED1-FBXO47 MED1 chr17 39434249 - FBXO47 chr17 38938732 - Exonic hg38 BRCA TCGA-EW-A1IW-01A 5 12 Out-of-frame Intra-chr q12 Tumor suppressor gene q12 Seq+ 87298 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPEN-CNIH3 SPEN chr1 15929156 + CNIH3 chr1 224739329 + Exonic hg38 BRCA TCGA-EW-A1IW-01A 3 9 Out-of-frame Intra-chr p36.21 Transcription factor q42.12 Seq+ 87299 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1D-ORMDL3 MYO1D chr17 32711988 - ORMDL3 chr17 39924225 - Exonic hg38 BRCA TCGA-EW-A1IW-01A 2 3 CDS-5'UTR Intra-chr q11.2 q21.1 Seq+ 87300 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD3-ZMAT4 NSD3 chr8 38314647 - ZMAT4 chr8 40532238 - Exonic hg38 BRCA TCGA-EW-A1IX-01A 49 240 Out-of-frame Intra-chr p11.23 Tumor suppressor gene p11.21 Transcription factor 87301 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHI1-CHEK2 AHI1 chr6 135323162 - CHEK2 chr22 28725367 - Exonic hg38 BRCA TCGA-EW-A1IX-01A 3 16 In-Frame Inter-chr q23.3 q12.1 Oncogene Tumor suppressor gene Seq+ 87302 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX14-NKAIN2 SNX14 chr6 85593579 - NKAIN2 chr6 124283005 + Exonic hg38 BRCA TCGA-EW-A1IX-01A 4 7 Out-of-frame Intra-chr q14.3 q22.31 Seq+ 87303 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLH1-GOLGA4 MLH1 chr3 37008905 + GOLGA4 chr3 37335053 + Exonic hg38 BRCA TCGA-EW-A1IZ-01A 4 6 Out-of-frame Intra-chr p22.2 Oncogene Tumor suppressor gene p22.2 Seq+ 87304 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP6V0A1-MSI2 ATP6V0A1 chr17 42483131 + MSI2 chr17 57529676 + Exonic hg38 BRCA TCGA-EW-A1J1-01A 23 66 In-Frame Intra-chr q21.2 q22 Seq+ 87305 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLTC-OTOP3 CLTC chr17 59683756 + OTOP3 chr17 74946661 + Exonic hg38 BRCA TCGA-EW-A1J1-01A 20 62 Out-of-frame Intra-chr q23.1 q25.1 Seq+ 87306 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP32-ELOF1 USP32 chr17 60205447 - ELOF1 chr19 11554365 - Exonic hg38 BRCA TCGA-EW-A1J1-01A 15 64 In-Frame Inter-chr q23.2 p13.2 Seq+ 87307 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP23-TEX14 ARHGAP23 chr17 38486140 + TEX14 chr17 58630554 - Exonic hg38 BRCA TCGA-EW-A1J1-01A 1 9 3'UTR-CDS Intra-chr q12 q22 Seq+ 87308 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC57-NPLOC4 CCDC57 chr17 82151560 - NPLOC4 chr17 81559416 - Exonic hg38 BRCA TCGA-EW-A1J1-01A 2 4 In-Frame Intra-chr q25.3 q25.3 87309 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H7A-SKIL ZC3H7A chr16 11797124 - SKIL chr3 170359699 + Exonic hg38 BRCA TCGA-EW-A1J1-01A 2 1 5'UTR-5'UTR Inter-chr p13.13 q26.2 Tumor suppressor gene Transcription factor 87310 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIMP2-MSI2 TIMP2 chr17 78924959 - MSI2 chr17 57596868 + Exonic hg38 BRCA TCGA-EW-A1J1-01A 1 3 In-Frame Intra-chr q25.3 q22 87311 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP6-ELOF1 USP6 chr17 5148767 + ELOF1 chr19 11554365 - Exonic hg38 BRCA TCGA-EW-A1J1-01A 1000 1000 In-Frame Inter-chr p13.2 p13.2 Seq+ 87312 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARNT2-PDLIM5 ARNT2 chr15 80404546 + PDLIM5 chr4 94618004 + Exonic hg38 BRCA TCGA-EW-A1J2-01A 12 36 Out-of-frame Inter-chr q25.1 Transcription factor q22.3 Seq+ 87313 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D22B-YPEL1 TBC1D22B chr6 37317206 + YPEL1 chr22 21701218 - Exonic hg38 BRCA TCGA-EW-A1J2-01A 7 12 In-Frame Inter-chr p21.2 q11.22 Seq+ 87314 ChimerSeq TCGA FAWG TCGA_RNA-Seq HUNK-MRAP HUNK chr21 31924760 + MRAP chr21 32306640 + Exonic hg38 BRCA TCGA-EW-A1J2-01A 4 5 Out-of-frame Intra-chr q22.11 CAMK:CAMKL q22.11 Seq+ 87315 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-RHOD PPFIA1 chr11 70272436 + RHOD chr11 67065896 + Exonic hg38 BRCA TCGA-EW-A1J3-01A 224 559 In-Frame Intra-chr q13.3 q13.2 Seq+ 87316 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED24-TNS4 MED24 chr17 40051510 - TNS4 chr17 40477400 - Exonic hg38 BRCA TCGA-EW-A1J3-01A 97 405 Out-of-frame Intra-chr q21.1 q21.2 Seq+ 87317 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARA-PSMD3 RARA chr17 40331396 + PSMD3 chr17 39994954 + Exonic hg38 BRCA TCGA-EW-A1J3-01A 41 192 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q21.1 Seq+ 87318 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARA-STAT3 RARA chr17 40309286 + STAT3 chr17 42348520 - Exonic hg38 BRCA TCGA-EW-A1J3-01A 11 110 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 87319 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-CDK12 FBXL20 chr17 39258305 - CDK12 chr17 39509705 + Exonic hg38 BRCA TCGA-EW-A1J3-01A 11 52 3'UTR-CDS Intra-chr q12 q12 Oncogene Seq+ 87320 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAPD5-SHANK2 PAPD5 chr16 50216195 + SHANK2 chr11 71147338 - Exonic hg38 BRCA TCGA-EW-A1J5-01A 169 719 Out-of-frame Inter-chr q12.1 q13.4 Seq+ 87321 ChimerSeq TCGA FAWG TCGA_RNA-Seq TESMIN-PPFIA1 TESMIN chr11 68738700 - PPFIA1 chr11 70362095 + Exonic hg38 BRCA TCGA-EW-A1J5-01A 11 37 In-Frame Intra-chr q13.3 q13.3 87322 ChimerSeq TCGA FAWG TCGA_RNA-Seq PI15-GDAP1 PI15 chr8 74825522 + GDAP1 chr8 74488678 + Exonic hg38 BRCA TCGA-EW-A1J6-01A 7 20 Out-of-frame Intra-chr q21.13 q21.11 87323 ChimerSeq TCGA FAWG TCGA_RNA-Seq DERA-LRP6 DERA chr12 15982436 + LRP6 chr12 12149153 - Exonic hg38 BRCA TCGA-EW-A1J6-01A 2 16 CDS-5'UTR Intra-chr p12.3 Seq+ 87324 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO38-CDC42SE2 FBXO38 chr5 148441237 + CDC42SE2 chr5 131385543 + Exonic hg38 BRCA TCGA-EW-A1J6-01A 1 1 Out-of-frame Intra-chr q32 q31.1 87325 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAG9-SKAP1 SPAG9 chr17 51079584 - SKAP1 chr17 48189500 - Exonic hg38 BRCA TCGA-EW-A1OV-01A 11 67 In-Frame Intra-chr q21.33 q21.32 Seq+ 87326 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNMA1-ECD KCNMA1 chr10 77183421 - ECD chr10 73163950 - Exonic hg38 BRCA TCGA-EW-A1OV-01A 4 14 CDS-5'UTR Intra-chr q22.3 q22.2 Seq+ 87327 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGMS1-PSMB2 SGMS1 chr10 50433476 - PSMB2 chr1 35636432 - Exonic hg38 BRCA TCGA-EW-A1OV-01A 4 9 5'UTR-CDS Inter-chr q11.23 Tumor suppressor gene p34.3 Seq+ 87328 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCNX2-COG2 PCNX2 chr1 233160283 - COG2 chr1 230683574 + Exonic hg38 BRCA TCGA-EW-A1OV-01A 3 7 Out-of-frame Intra-chr q42.2 q42.2 87329 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC30A7-HHIPL2 SLC30A7 chr1 100913806 + HHIPL2 chr1 222532111 - Exonic hg38 BRCA TCGA-EW-A1OV-01A 4 3 Out-of-frame Intra-chr p21.2 q41 Seq+ 87330 ChimerSeq TCGA FAWG TCGA_RNA-Seq COG2-PCNX2 COG2 chr1 230679052 + PCNX2 chr1 233139855 - Exonic hg38 BRCA TCGA-EW-A1OV-01A 2 6 Out-of-frame Intra-chr q42.2 q42.2 87331 ChimerSeq TCGA FAWG TCGA_RNA-Seq ILF3-ZNF627 ILF3 chr19 10677310 + ZNF627 chr19 11575250 + Exonic hg38 BRCA TCGA-EW-A1OV-01A 1 2 CDS-5'UTR Intra-chr p13.2 p13.2 Transcription factor Seq+ 87332 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCSTN-TMBIM6 NCSTN chr1 160343481 + TMBIM6 chr12 49759221 + Exonic hg38 BRCA TCGA-EW-A1OW-01A 1 1 Out-of-frame Inter-chr q23.2 q13.12 87333 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-ABCA8 BCAS3 chr17 60808076 + ABCA8 chr17 68869779 - Exonic hg38 BRCA TCGA-EW-A1OX-01A 15 77 In-Frame Intra-chr q23.2 q24.2 Seq+ 87334 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBCD-STXBP4 TBCD chr17 82906053 + STXBP4 chr17 55141310 + Exonic hg38 BRCA TCGA-EW-A1OX-01A 5 15 5'UTR-CDS Intra-chr q22 Seq+ 87335 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF652-CD300LD ZNF652 chr17 49316826 - CD300LD chr17 74582311 - Exonic hg38 BRCA TCGA-EW-A1OX-01A 3 12 Out-of-frame Intra-chr q21.33 Transcription factor q25.1 Seq+ 87336 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1D-EFCAB3 PPM1D chr17 60633977 + EFCAB3 chr17 62369171 + Exonic hg38 BRCA TCGA-EW-A1OX-01A 3 9 CDS-5'UTR Intra-chr q23.2 q23.2 87337 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBCD-FN3KRP TBCD chr17 82909307 + FN3KRP chr17 82726833 + Exonic hg38 BRCA TCGA-EW-A1OX-01A 1 11 5'UTR-5'UTR Intra-chr q25.3 Seq+ 87338 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETHE1-UGT2A3 ETHE1 chr19 43526201 - UGT2A3 chr4 68932759 - Exonic hg38 BRCA TCGA-EW-A1OY-01A 1 9 CDS-5'UTR Inter-chr q13.31 87339 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3CB-TSPO PIK3CB chr3 138796463 - TSPO chr22 43159210 + Exonic hg38 BRCA TCGA-EW-A1OZ-01A 45 147 5'UTR-5'UTR Inter-chr q22.3 Oncogene q13.2 Seq+ 87340 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANK3-UBE2I ANK3 chr10 60508474 - UBE2I chr16 1324730 + Exonic hg38 BRCA TCGA-EW-A1OZ-01A 24 51 5'UTR-CDS Inter-chr q21.2 p13.3 87341 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOM1L2-ANK3 TOM1L2 chr17 17972262 - ANK3 chr10 60508625 - Exonic hg38 BRCA TCGA-EW-A1OZ-01A 10 38 CDS-5'UTR Inter-chr p11.2 Tumor suppressor gene q21.2 87342 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0930-ANK3 KIAA0930 chr22 45240640 - ANK3 chr10 60139087 - Exonic hg38 BRCA TCGA-EW-A1OZ-01A 11 19 In-Frame Inter-chr q13.31 q21.2 Seq+ 87343 ChimerSeq TCGA FAWG TCGA_RNA-Seq GABARAP-MYOCD GABARAP chr17 7241342 - MYOCD chr17 12736161 + Exonic hg38 BRCA TCGA-EW-A1OZ-01A 7 14 Out-of-frame Intra-chr p13.1 Tumor suppressor gene p12 Seq+ 87344 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT9-UBE2L5P SEPT9 chr17 77307197 + UBE2L5P chr13 30426725 + Exonic hg38 BRCA TCGA-EW-A1OZ-01A 7 9 Out-of-frame Inter-chr q12.3 87345 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK1IP1L-1 MAPK1IP1L chr14 55051803 + 1 chr17 41185321 - Exonic hg38 BRCA TCGA-EW-A1OZ-01A 3 16 5'UTR-CDS Inter-chr q22.3 87346 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT9-LPP SEPT9 chr17 77307197 + LPP chr3 188484592 + Exonic hg38 BRCA TCGA-EW-A1OZ-01A 3 9 Out-of-frame Inter-chr q27.3 Oncogene Seq+ 87347 ChimerSeq TCGA FAWG TCGA_RNA-Seq LYRM9-NSRP1 LYRM9 chr17 27882569 - NSRP1 chr17 30172542 + Exonic hg38 BRCA TCGA-EW-A1OZ-01A 2 8 In-Frame Intra-chr q11.2 q11.2 Seq+ 87348 ChimerSeq TCGA FAWG TCGA_RNA-Seq DRG2-ZNF624 DRG2 chr17 18093973 + ZNF624 chr17 16624509 - Exonic hg38 BRCA TCGA-EW-A1OZ-01A 1 9 Out-of-frame Intra-chr p11.2 p11.2 Transcription factor Seq+ 87349 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAR1A-CDK12 SAR1A chr10 70157764 - CDK12 chr17 39490557 + Exonic hg38 BRCA TCGA-EW-A1OZ-01A 2 5 Out-of-frame Inter-chr q22.1 q12 Oncogene Seq+ 87350 ChimerSeq TCGA FAWG TCGA_RNA-Seq NLK-VBP1 NLK chr17 28043331 + VBP1 chrX 155236229 + Exonic hg38 BRCA TCGA-EW-A1OZ-01A 1 4 Out-of-frame Inter-chr q11.2 CMGC:MAPK q28 87351 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREB3L2-LASP1 CREB3L2 chr7 137884995 - LASP1 chr17 38898412 + Exonic hg38 BRCA TCGA-EW-A1OZ-01A 1 2 Out-of-frame Inter-chr q33 Transcription factor q12 87352 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN9-AGBL1 PTPN9 chr15 75508917 - AGBL1 chr15 86674273 + Exonic hg38 BRCA TCGA-EW-A1P0-01A 14 38 In-Frame Intra-chr q24.2 q25.3 Seq+ 87353 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNB5-PDE6D GNB5 chr15 52141140 - PDE6D chr2 231739202 - Exonic hg38 BRCA TCGA-EW-A1P0-01A 8 45 CDS-3'UTR Inter-chr q21.2 q37.1 Seq+ 87354 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLIT3-HSD17B4 SLIT3 chr5 168883265 - HSD17B4 chr5 119456315 + Exonic hg38 BRCA TCGA-EW-A1P0-01A 2 26 In-Frame Intra-chr q35.1 q23.1 Seq+ 87355 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2K5-ADAMTSL3 MAP2K5 chr15 67748601 + ADAMTSL3 chr15 83704389 + Exonic hg38 BRCA TCGA-EW-A1P0-01A 3 18 In-Frame Intra-chr q23 STE:STE7 q25.2 Seq+ 87356 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMOD3-EIF4E2 TMOD3 chr15 51829836 + EIF4E2 chr2 232556416 + Exonic hg38 BRCA TCGA-EW-A1P0-01A 3 10 5'UTR-CDS Inter-chr q21.2 q37.1 Seq+ 87357 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP13-NRG1 AKAP13 chr15 85543955 + NRG1 chr8 32595828 + Exonic hg38 BRCA TCGA-EW-A1P0-01A 1 17 Out-of-frame Inter-chr q25.3 p12 Seq+ 87358 ChimerSeq TCGA FAWG TCGA_RNA-Seq AIM1-MYB AIM1 chr6 106361081 + MYB chr6 135192324 + Exonic hg38 BRCA TCGA-EW-A1P3-01A 9 17 Out-of-frame Intra-chr q23.3 Oncogene Transcription factor Seq+ 87359 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13L-TRAFD1 MED13L chr12 116237468 - TRAFD1 chr12 112134738 + Exonic hg38 BRCA TCGA-EW-A1P3-01A 1 8 Out-of-frame Intra-chr q24.21 q24.13 Transcription factor Seq+ 87360 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEX3D-DCTN6 MEX3D chr19 1567464 - DCTN6 chr8 30175085 + Exonic hg38 BRCA TCGA-EW-A1P4-01A 47 116 In-Frame Inter-chr p13.3 p12 Seq+ 87361 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEX3D-LEPROTL1 MEX3D chr19 1567464 - LEPROTL1 chr8 30175085 + Exonic hg38 BRCA TCGA-EW-A1P4-01A 47 106 CDS-3'UTR Inter-chr p13.3 p12 87362 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCMF1-PRKDC KCMF1 chr2 85028056 + PRKDC chr8 47859759 - Exonic hg38 BRCA TCGA-EW-A1P4-01A 8 77 In-Frame Inter-chr p11.2 Transcription factor q11.21 Oncogene Seq+ 87363 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFDP2-PLD1 TFDP2 chr3 142093061 - PLD1 chr3 171789535 - Exonic hg38 BRCA TCGA-EW-A1P4-01A 4 21 5'UTR-5'UTR Intra-chr q23 Transcription factor q26.31 Tumor suppressor gene Seq+ 87364 ChimerSeq TCGA FAWG TCGA_RNA-Seq BZW2-KLHL7 BZW2 chr7 16704669 + KLHL7 chr7 23155991 + Exonic hg38 BRCA TCGA-EW-A1P4-01A 1 10 CDS-5'UTR Intra-chr p21.1 p15.3 87365 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDLR-ZNF333 LDLR chr19 11120522 + ZNF333 chr19 14731175 + Exonic hg38 BRCA TCGA-EW-A1P4-01A 2 3 Out-of-frame Intra-chr p13.2 p13.12 Transcription factor 87366 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF3B-C3orf33 EIF3B chr7 2372795 + C3orf33 chr3 155767669 - Exonic hg38 BRCA TCGA-EW-A1P4-01A 1 5 In-Frame Inter-chr p22.3 q25.31 87367 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13B-SNX31 VPS13B chr8 99170163 + SNX31 chr8 100636011 - Exonic hg38 BRCA TCGA-EW-A1P5-01A 2 7 Out-of-frame Intra-chr q22.2 q22.3 Seq+ 87368 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPS2-GLIPR1 CAPS2 chr12 75390322 - GLIPR1 chr12 75481834 + Exonic hg38 BRCA TCGA-EW-A1P6-01A 1 7 5'UTR-CDS Intra-chr q21.2 q21.2 Tumor suppressor gene 87369 ChimerSeq TCGA FAWG TCGA_RNA-Seq RLF-ZMPSTE24 RLF chr1 40161636 + ZMPSTE24 chr1 40290854 + Exonic hg38 BRCA TCGA-EW-A1P7-01A 10 77 In-Frame Intra-chr p34.2 Transcription factor p34.2 Seq+ 87370 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLK1-CAT TLK1 chr2 171117739 - CAT chr11 34449192 + Exonic hg38 BRCA TCGA-EW-A1P7-01A 3 15 In-Frame Inter-chr q31.1 Other:TLK p13 Tumor suppressor gene Seq+ 87371 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR4435-RUFY1 MIR4435 chr2 111494885 - RUFY1 chr5 179601892 + Exonic hg38 BRCA TCGA-EW-A1P8-01A 10 36 Out-of-frame Inter-chr 87372 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHODL-ANKRD30BP2 CHODL chr21 17917400 + ANKRD30BP2 chr21 13051796 + Exonic hg38 BRCA TCGA-EW-A1P8-01A 1 20 5'UTR-5'UTR Intra-chr q21.1 q11.2 Seq+ 87373 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLPH3L-CHRM3 GOLPH3L chr1 150661814 - CHRM3 chr1 239492709 + Exonic hg38 BRCA TCGA-EW-A1P8-01A 1 6 CDS-5'UTR Intra-chr q21.3 q43 Seq+ 87374 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM104-DNAI2 TMEM104 chr17 74795632 + DNAI2 chr17 74314121 + Exonic hg38 BRCA TCGA-EW-A1PA-01A 55 65 In-Frame Intra-chr q25.1 q25.1 Seq+ 87375 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMC6-FAM104A TMC6 chr17 78128659 - FAM104A chr17 73209768 - Exonic hg38 BRCA TCGA-EW-A1PA-01A 1 23 5'UTR-CDS Intra-chr q25.3 q25.1 Seq+ 87376 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKNK2-FAM151A MKNK2 chr19 2046186 - FAM151A chr1 54610555 - Exonic hg38 BRCA TCGA-EW-A1PA-01A 4 10 Out-of-frame Inter-chr p13.3 p32.3 Seq+ 87377 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSTD3-TSHZ2 TSTD3 chr6 99521147 + TSHZ2 chr20 53487144 + Exonic hg38 BRCA TCGA-EW-A1PA-01A 4 9 5'UTR-3'UTR Inter-chr q16.2 q13.2 Transcription factor Seq+ 87378 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMYND8-C2orf27AP1 ZMYND8 chr20 47347856 - C2orf27AP1 chrY 11086054 - Exonic hg38 BRCA TCGA-EW-A1PA-01A 3 12 Out-of-frame Inter-chr q13.12 q11.21 87379 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF813-TOP1 ZNF813 chr19 53467789 + TOP1 chr20 41112782 + Exonic hg38 BRCA TCGA-EW-A1PA-01A 4 6 5'UTR-CDS Inter-chr q13.42 Transcription factor q12 Oncogene Seq+ 87380 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV6-YTHDF2 ETV6 chr12 11839304 + YTHDF2 chr1 28768929 + Exonic hg38 BRCA TCGA-EW-A1PB-01A 359 458 Out-of-frame Inter-chr p13.2 Tumor suppressor gene Transcription factor p35.3 Seq+ 87381 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIST4H4-MGP HIST4H4 chr12 14770679 - MGP chr12 14884245 - Exonic hg38 BRCA TCGA-EW-A1PB-01A 24 115 3'UTR-CDS Intra-chr p12.3 p12.3 87382 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSPH-PHKG1 PSPH chr7 56051138 - PHKG1 chr7 56088975 - Exonic hg38 BRCA TCGA-EW-A1PB-01A 12 52 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 87383 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGS1-BIRC5 PGS1 chr17 78399537 + BIRC5 chr17 78223465 + Exonic hg38 BRCA TCGA-EW-A1PB-01A 13 42 In-Frame Intra-chr q25.3 q25.3 Oncogene Seq+ 87384 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF385B-SCG5 ZNF385B chr2 179769503 - SCG5 chr15 32679766 + Exonic hg38 BRCA TCGA-EW-A1PB-01A 8 62 3'UTR-3'UTR Inter-chr q31.3 Transcription factor Seq+ 87385 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABR-STAP2 ABR chr17 1179667 - STAP2 chr19 4338944 - Exonic hg38 BRCA TCGA-EW-A1PB-01A 6 13 5'UTR-5'UTR Inter-chr p13.3 p13.3 87386 ChimerSeq TCGA FAWG TCGA_RNA-Seq GABRP-KCNIP1 GABRP chr5 170797548 + KCNIP1 chr5 170718758 + Exonic hg38 BRCA TCGA-EW-A1PB-01A 4 18 In-Frame Intra-chr q35.1 q35.1 Seq+ 87387 ChimerSeq TCGA FAWG TCGA_RNA-Seq GUK1-TPPP GUK1 chr1 228145624 + TPPP chr5 678064 - Exonic hg38 BRCA TCGA-EW-A1PB-01A 5 11 CDS-5'UTR Inter-chr q42.13 p15.33 Seq+ 87388 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASMTL-UGT1A1 ASMTL chrY 1452748 - UGT1A1 chr2 233767034 + Exonic hg38 BRCA TCGA-EW-A1PB-01A 5 9 In-Frame Inter-chr p22.33 q37.1 Oncogene Seq+ 87389 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASMTL-UGT1A10 ASMTL chrY 1452748 - UGT1A10 chr2 233767034 + Exonic hg38 BRCA TCGA-EW-A1PB-01A 5 9 In-Frame Inter-chr p22.33 q37.1 Seq+ 87390 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASMTL-UGT1A3 ASMTL chrY 1452748 - UGT1A3 chr2 233767034 + Exonic hg38 BRCA TCGA-EW-A1PB-01A 5 9 In-Frame Inter-chr p22.33 q37.1 Seq+ 87391 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASMTL-UGT1A4 ASMTL chrY 1452748 - UGT1A4 chr2 233767034 + Exonic hg38 BRCA TCGA-EW-A1PB-01A 5 9 In-Frame Inter-chr p22.33 q37.1 Seq+ 87392 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASMTL-UGT1A5 ASMTL chrY 1452748 - UGT1A5 chr2 233767034 + Exonic hg38 BRCA TCGA-EW-A1PB-01A 5 9 In-Frame Inter-chr p22.33 q37.1 Seq+ 87393 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASMTL-UGT1A6 ASMTL chrY 1452748 - UGT1A6 chr2 233767034 + Exonic hg38 BRCA TCGA-EW-A1PB-01A 5 9 In-Frame Inter-chr p22.33 q37.1 Seq+ 87394 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASMTL-UGT1A7 ASMTL chrY 1452748 - UGT1A7 chr2 233767034 + Exonic hg38 BRCA TCGA-EW-A1PB-01A 5 9 In-Frame Inter-chr p22.33 q37.1 Seq+ 87395 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASMTL-UGT1A8 ASMTL chrY 1452748 - UGT1A8 chr2 233767034 + Exonic hg38 BRCA TCGA-EW-A1PB-01A 5 9 In-Frame Inter-chr p22.33 q37.1 Seq+ 87396 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASMTL-UGT1A9 ASMTL chrY 1452748 - UGT1A9 chr2 233767034 + Exonic hg38 BRCA TCGA-EW-A1PB-01A 5 9 In-Frame Inter-chr p22.33 q37.1 Seq+ 87397 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHROOM3-FIP1L1 SHROOM3 chr4 76586469 + FIP1L1 chr4 53383773 + Exonic hg38 BRCA TCGA-EW-A1PB-01A 3 12 Out-of-frame Intra-chr q21.1 q12 87398 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF345-TRIM21 ZNF345 chr19 36892985 + TRIM21 chr11 4390458 - Exonic hg38 BRCA TCGA-EW-A1PB-01A 2 8 5'UTR-5'UTR Inter-chr q13.12 Transcription factor p15.4 87399 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGF2BP2-NCEH1 IGF2BP2 chr3 185823153 - NCEH1 chr3 172648114 - Exonic hg38 BRCA TCGA-EW-A1PB-01A 1 4 Out-of-frame Intra-chr q27.2 q26.31 Seq+ 87400 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFNA3-PIK3C2G EFNA3 chr1 155085404 + PIK3C2G chr12 18346641 + Exonic hg38 BRCA TCGA-EW-A1PC-01B 21 22 In-Frame Inter-chr q21.3 p12.3 Seq+ 87401 ChimerSeq TCGA FAWG TCGA_RNA-Seq MITF-MTERF3 MITF chr3 69739701 + MTERF3 chr8 96257114 - Exonic hg38 BRCA TCGA-EW-A1PC-01B 3 25 Out-of-frame Inter-chr p13 Oncogene Transcription factor q22.1 Transcription factor 87402 ChimerSeq TCGA FAWG TCGA_RNA-Seq VAV3-RAB9B VAV3 chr1 107683488 - RAB9B chrX 103827078 - Exonic hg38 BRCA TCGA-EW-A1PC-01B 1 7 CDS-5'UTR Inter-chr p13.3 q22.2 87403 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPS2-DPH6 COPS2 chr15 49155525 - DPH6 chr15 35454820 - Exonic hg38 BRCA TCGA-EW-A1PD-01A 1 4 In-Frame Intra-chr q21.1 Tumor suppressor gene q14 87404 ChimerSeq TCGA FAWG TCGA_RNA-Seq IKBKAP-TBC1D2 IKBKAP chr9 108933864 - TBC1D2 chr9 98251926 - Exonic hg38 BRCA TCGA-EW-A1PD-01A 1 3 Out-of-frame Intra-chr q31.3 q22.33 Seq+ 87405 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMYND8-GTPBP1 ZMYND8 chr20 47220258 - GTPBP1 chr22 38715907 + Exonic hg38 BRCA TCGA-EW-A1PF-01A 28 153 In-Frame Inter-chr q13.12 q13.1 Seq+ 87406 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANBP9-PROCR RANBP9 chr6 13696785 - PROCR chr20 35215893 + Exonic hg38 BRCA TCGA-EW-A1PF-01A 12 34 CDS-3'UTR Inter-chr p23 Tumor suppressor gene q11.22 87407 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA6-RALGAPA2 NCOA6 chr20 34746807 - RALGAPA2 chr20 20589365 - Exonic hg38 BRCA TCGA-EW-A1PF-01A 4 13 In-Frame Intra-chr q11.22 p11.23 Seq+ 87408 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD3-GCNT2 BTBD3 chr20 11919836 + GCNT2 chr6 10621351 + Exonic hg38 BRCA TCGA-EW-A1PF-01A 4 5 CDS-3'UTR Inter-chr p12.2 p24.3 Seq+ 87409 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD6-MCUR1 CHD6 chr20 41618340 - MCUR1 chr6 13807044 - Exonic hg38 BRCA TCGA-EW-A1PF-01A 3 4 5'UTR-CDS Inter-chr q12 p23 87410 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK35-CHD6 STK35 chr20 2103365 + CHD6 chr20 41484607 - Exonic hg38 BRCA TCGA-EW-A1PF-01A 1 12 Out-of-frame Intra-chr p13 q12 Seq+ 87411 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL1A1-FLNA COL1A1 chr17 50201411 - FLNA chrX 154355072 - Exonic hg38 BRCA TCGA-EW-A1PF-01A 1 11 In-Frame Inter-chr q21.33 Oncogene q28 Tumor suppressor gene 87412 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP4R1L-NCOA6 PPP4R1L chr20 58272769 - NCOA6 chr20 34792563 - Exonic hg38 BRCA TCGA-EW-A1PF-01A 1 10 3'UTR-5'UTR Intra-chr q13.32 q11.22 Seq+ 87413 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMD12-USP37 SAMD12 chr8 118439832 - USP37 chr2 218547091 - Exonic hg38 BRCA TCGA-EW-A1PF-01A 2 5 Out-of-frame Inter-chr q24.12 q35 Seq+ 87414 ChimerSeq TCGA FAWG TCGA_RNA-Seq GFOD1-BCAS1 GFOD1 chr6 13486638 - BCAS1 chr20 54028972 - Exonic hg38 BRCA TCGA-EW-A1PF-01A 2 4 In-Frame Inter-chr p23 q13.2 Seq+ 87415 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANBP9-CDKAL1 RANBP9 chr6 13696785 - CDKAL1 chr6 20955419 + Exonic hg38 BRCA TCGA-EW-A1PF-01A 3 0 Out-of-frame Intra-chr p23 Tumor suppressor gene p22.3 Seq+ 87416 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP37-SAMD12 USP37 chr2 218546221 - SAMD12 chr8 118197732 - Exonic hg38 BRCA TCGA-EW-A1PF-01A 1 8 Out-of-frame Inter-chr q35 q24.12 Seq+ 87417 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS1-KIF16B BCAS1 chr20 54028392 - KIF16B chr20 16528440 - Exonic hg38 BRCA TCGA-EW-A1PF-01A 2 3 Out-of-frame Intra-chr q13.2 p12.1 Seq+ 87418 ChimerSeq TCGA FAWG TCGA_RNA-Seq PALMD-CCDC171 PALMD chr1 99667766 + CCDC171 chr9 15777600 + Exonic hg38 BRCA TCGA-EW-A1PG-01A 4 1 Out-of-frame Inter-chr p21.2 p22.3 Seq+ 87419 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAG4-NEDD8 BAG4 chr8 38177139 + NEDD8 chr14 24218431 - Exonic hg38 BRCA TCGA-EW-A1PH-01A 10 322 CDS-5'UTR Inter-chr p11.23 q12 Seq+ 87420 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD3-ADAM32 NSD3 chr8 38281467 - ADAM32 chr8 39274312 + Exonic hg38 BRCA TCGA-EW-A1PH-01A 29 150 CDS-3'UTR Intra-chr p11.23 Tumor suppressor gene 87421 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF6-SH2D1B ATF6 chr1 161802272 + SH2D1B chr1 162397315 - Exonic hg38 BRCA TCGA-EW-A1PH-01A 34 95 In-Frame Intra-chr q23.3 Transcription factor q23.3 Seq+ 87422 ChimerSeq TCGA FAWG TCGA_RNA-Seq LTBP4-MYO1B LTBP4 chr19 40614446 + MYO1B chr2 191414048 + Exonic hg38 BRCA TCGA-EW-A1PH-01A 12 39 Out-of-frame Inter-chr q13.2 q32.3 Seq+ 87423 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLD3-ACTN4 PLD3 chr19 40348768 + ACTN4 chr19 38708117 + Exonic hg38 BRCA TCGA-EW-A1PH-01A 13 35 5'UTR-3'UTR Intra-chr q13.2 Seq+ 87424 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSTD1-LSM14A TSTD1 chr1 161038880 - LSM14A chr19 34194478 + Exonic hg38 BRCA TCGA-EW-A1PH-01A 7 5 CDS-3'UTR Inter-chr q23.3 Seq+ 87425 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM1-SDC3 PUM1 chr1 31059204 - SDC3 chr1 30878740 - Exonic hg38 BRCA TCGA-EW-A1PH-01A 3 20 In-Frame Intra-chr p35.2 p35.2 Seq+ 87426 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF2-CLTCL1 NF2 chr22 29683064 + CLTCL1 chr22 19183611 - Exonic hg38 BRCA TCGA-EW-A1PH-01A 2 11 3'UTR-CDS Intra-chr q12.2 Oncogene Tumor suppressor gene q11.21 Seq+ 87427 ChimerSeq TCGA FAWG TCGA_RNA-Seq RMND5A-CD8A RMND5A chr2 86773435 + CD8A chr2 86785971 - Exonic hg38 BRCA TCGA-EW-A1PH-01A 3 7 3'UTR-3'UTR Intra-chr p11.2 p11.2 Seq+ 87428 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHROOM3-TRIM28 SHROOM3 chr4 76710287 + TRIM28 chr19 58548862 + Exonic hg38 BRCA TCGA-EW-A1PH-01A 3 6 Out-of-frame Inter-chr q21.1 q13.43 Seq+ 87429 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF6-SPATA46 ATF6 chr1 161802272 + SPATA46 chr1 162375403 - Exonic hg38 BRCA TCGA-EW-A1PH-01A 1 9 Out-of-frame Intra-chr q23.3 Transcription factor q23.3 87430 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPIDR-UBE2V2 SPIDR chr8 47440542 + UBE2V2 chr8 48043033 + Exonic hg38 BRCA TCGA-EW-A1PH-01A 1 7 Out-of-frame Intra-chr q11.21 q11.21 87431 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF569-PRRC2C ZNF569 chr19 37444907 - PRRC2C chr1 171574927 + Exonic hg38 BRCA TCGA-EW-A1PH-01A 1 5 In-Frame Inter-chr q13.12 Transcription factor q24.3 87432 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIK3-PPP1R1B SIK3 chr11 117098143 - PPP1R1B chr17 39629170 + Exonic hg38 BRCA TCGA-EW-A2FR-01A 75 139 In-Frame Inter-chr q23.3 q12 Tumor suppressor gene Seq+ 87433 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDHAF2-ACTN3 SDHAF2 chr11 61430182 + ACTN3 chr11 66551239 + Exonic hg38 BRCA TCGA-EW-A2FR-01A 4 37 In-Frame Intra-chr q12.2 q13.2 Seq+ 87434 ChimerSeq TCGA FAWG TCGA_RNA-Seq HECTD1-SCFD1 HECTD1 chr14 31156840 - SCFD1 chr14 30707990 + Exonic hg38 BRCA TCGA-EW-A2FR-01A 5 15 Out-of-frame Intra-chr q12 q12 Seq+ 87435 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH2L-PPP1R14A ASH2L chr8 38119363 + PPP1R14A chr19 38251446 - Exonic hg38 BRCA TCGA-EW-A2FR-01A 3 16 Out-of-frame Inter-chr p11.23 q13.2 Seq+ 87436 ChimerSeq TCGA FAWG TCGA_RNA-Seq HAUS8-C19orf57 HAUS8 chr19 17059557 - C19orf57 chr19 13890462 - Exonic hg38 BRCA TCGA-EW-A2FR-01A 2 16 In-Frame Intra-chr p13.11 p13.12 Seq+ 87437 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEZ6L2-NAP1L4P2 SEZ6L2 chr16 29898941 - NAP1L4P2 chrX 106466688 - Exonic hg38 BRCA TCGA-EW-A2FR-01A 3 7 Out-of-frame Inter-chr p11.2 q22.3 87438 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD3-NEGR1 NSD3 chr8 38381799 - NEGR1 chr1 71776297 - Exonic hg38 BRCA TCGA-EW-A2FR-01A 3 6 5'UTR-CDS Inter-chr p11.23 Tumor suppressor gene p31.1 87439 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOLPP1-TBC1D13 DOLPP1 chr9 129081207 + TBC1D13 chr9 128797055 + Exonic hg38 BRCA TCGA-EW-A2FR-01A 1 12 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 87440 ChimerSeq TCGA FAWG TCGA_RNA-Seq LENG8-LAIR1 LENG8 chr19 54449306 + LAIR1 chr19 54356966 - Exonic hg38 BRCA TCGA-EW-A2FR-01A 1 12 3'UTR-5'UTR Intra-chr 87441 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIEN1-BARX2 MIEN1 chr17 39729685 - BARX2 chr11 129436751 + Exonic hg38 BRCA TCGA-EW-A2FR-01A 2 6 Out-of-frame Inter-chr q12 q24.3 Transcription factor 87442 ChimerSeq TCGA FAWG TCGA_RNA-Seq STRN3-SNTG1 STRN3 chr14 31025904 - SNTG1 chr8 49910892 + Exonic hg38 BRCA TCGA-EW-A2FR-01A 2 2 CDS-5'UTR Inter-chr q12 q11.21 87443 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPSF6-ZBTB1 CPSF6 chr12 69262562 + ZBTB1 chr14 64521487 + Exonic hg38 BRCA TCGA-EW-A2FR-01A 1 2 3'UTR-5'UTR Inter-chr q15 q23.3 Transcription factor 87444 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCHSD2-IT1 FCHSD2 chr11 72887470 - IT1 chr8 32139215 + Exonic hg38 BRCA TCGA-EW-A2FS-01A 5 16 Out-of-frame Inter-chr q13.4 87445 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC7-USP22 EXOC7 chr17 76101271 - USP22 chr17 21007996 - Exonic hg38 BRCA TCGA-EW-A2FS-01A 5 5 Out-of-frame Intra-chr q25.1 p11.2 Seq+ 87446 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAX-DHDH BAX chr19 48956333 + DHDH chr19 48935000 + Exonic hg38 BRCA TCGA-EW-A2FS-01A 2 13 In-Frame Intra-chr q13.33 Tumor suppressor gene q13.33 Seq+ 87447 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC7-ST6GALNAC2 EXOC7 chr17 76083690 - ST6GALNAC2 chr17 76566271 - Exonic hg38 BRCA TCGA-EW-A2FS-01A 3 5 In-Frame Intra-chr q25.1 q25.1 87448 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-ARHGEF17 SHANK2 chr11 70698688 - ARHGEF17 chr11 73346883 + Exonic hg38 BRCA TCGA-EW-A2FS-01A 2 8 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 87449 ChimerSeq TCGA FAWG TCGA_RNA-Seq YPEL2-B4GALNT2 YPEL2 chr17 59353526 + B4GALNT2 chr17 49152800 + Exonic hg38 BRCA TCGA-EW-A2FS-01A 2 2 Out-of-frame Intra-chr q22 q21.32 Seq+ 87450 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIF3L1-ORC2 NIF3L1 chr2 200893408 + ORC2 chr2 200913992 - Exonic hg38 BRCA TCGA-EW-A2FS-01A 1 3 In-Frame Intra-chr q33.1 q33.1 87451 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAG9-SKAP1 SPAG9 chr17 51047375 - SKAP1 chr17 48137337 - Exonic hg38 BRCA TCGA-EW-A2FS-01A 1 2 Out-of-frame Intra-chr q21.33 q21.32 Seq+ 87452 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK4-SPINT2 PAK4 chr19 39125919 + SPINT2 chr19 38283627 + Exonic hg38 BRCA TCGA-EW-A2FV-01A 52 70 5'UTR-CDS Intra-chr q13.2 STE:STE20 q13.2 Tumor suppressor gene Seq+ 87453 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF587B-ZSCAN4 ZNF587B chr19 57839149 + ZSCAN4 chr19 57676041 + Exonic hg38 BRCA TCGA-EW-A2FV-01A 7 79 CDS-5'UTR Intra-chr q13.43 Transcription factor q13.43 Transcription factor Seq+ 87454 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF586-ZSCAN4 ZNF586 chr19 57769878 + ZSCAN4 chr19 57676041 + Exonic hg38 BRCA TCGA-EW-A2FV-01A 1 34 5'UTR-5'UTR Intra-chr q13.43 Transcription factor q13.43 Transcription factor 87455 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK4-TSHZ2 STK4 chr20 44987296 + TSHZ2 chr20 53487144 + Exonic hg38 BRCA TCGA-EW-A2FV-01A 2 21 CDS-3'UTR Intra-chr q13.12 q13.2 Transcription factor Seq+ 87456 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R12C-ZNF579 PPP1R12C chr19 55092838 - ZNF579 chr19 55577452 - Exonic hg38 BRCA TCGA-EW-A2FV-01A 3 11 Out-of-frame Intra-chr q13.42 q13.42 Transcription factor 87457 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM37-PCTP TRIM37 chr17 59106441 - PCTP chr17 55767335 + Exonic hg38 BRCA TCGA-EW-A2FV-01A 1 17 In-Frame Intra-chr q22 q22 Seq+ 87458 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACE-MAP3K3 ACE chr17 63484541 + MAP3K3 chr17 63652557 + Exonic hg38 BRCA TCGA-EW-A2FV-01A 1 5 Out-of-frame Intra-chr q23.3 q23.3 STE:STE11 87459 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP32-C20orf24 ARHGAP32 chr11 129062280 - C20orf24 chr20 36607715 + Exonic hg38 BRCA TCGA-EW-A2FW-01A 21 80 Out-of-frame Inter-chr q24.3 q11.23 Seq+ 87460 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPT1A-KCNG1 CPT1A chr11 68780640 - KCNG1 chr20 51012416 - Exonic hg38 BRCA TCGA-EW-A2FW-01A 7 31 CDS-5'UTR Inter-chr q13.3 q13.13 Seq+ 87461 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCG1-TAF4 PLCG1 chr20 41137858 + TAF4 chr20 62009174 - Exonic hg38 BRCA TCGA-EW-A2FW-01A 5 8 CDS-5'UTR Intra-chr q12 Oncogene Seq+ 87462 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM69A-NTNG1 FAM69A chr1 92961376 - NTNG1 chr1 107480611 + Exonic hg38 BRCA TCGA-EW-A2FW-01A 3 11 Out-of-frame Intra-chr p22.1 p13.3 Seq+ 87463 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN1-ROMO1 PTPN1 chr20 50574654 + ROMO1 chr20 35699633 + Exonic hg38 BRCA TCGA-EW-A2FW-01A 3 9 CDS-5'UTR Intra-chr q13.13 Tumor suppressor gene q11.22 Seq+ 87464 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERGIC3-TRMT6 ERGIC3 chr20 35548865 + TRMT6 chr20 5946533 - Exonic hg38 BRCA TCGA-EW-A2FW-01A 2 7 Out-of-frame Intra-chr q11.22 p12.3 Seq+ 87465 ChimerSeq TCGA FAWG TCGA_RNA-Seq UQCC1-CRLS1 UQCC1 chr20 35347164 - CRLS1 chr20 6032012 + Exonic hg38 BRCA TCGA-EW-A2FW-01A 1 4 In-Frame Intra-chr q11.22 p12.3 87466 ChimerSeq TCGA FAWG TCGA_RNA-Seq NARS2-SERINC3 NARS2 chr11 78436525 - SERINC3 chr20 44522109 - Exonic hg38 BRCA TCGA-EW-A2FW-01A 1000 1000 Out-of-frame Inter-chr q14.1 q13.12 Seq+ 87467 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3CB-PCCB PIK3CB chr3 138796463 - PCCB chr3 136283837 + Exonic hg38 BRCA TCGA-EW-A3E8-01B 20 56 5'UTR-CDS Intra-chr q22.3 Oncogene q22.3 Seq+ 87468 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNI-SCARB2 CCNI chr4 77075472 - SCARB2 chr4 76195864 - Exonic hg38 BRCA TCGA-EW-A3E8-01B 12 54 In-Frame Intra-chr q21.1 q21.1 Seq+ 87469 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3CB-COPB2 PIK3CB chr3 138759173 - COPB2 chr3 139383435 - Exonic hg38 BRCA TCGA-EW-A3E8-01B 3 6 In-Frame Intra-chr q22.3 Oncogene q23 Seq+ 87470 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM14C-PAK1IP1 TMEM14C chr6 10725037 + PAK1IP1 chr6 10708953 + Exonic hg38 BRCA TCGA-EW-A3U0-01A 15 123 3'UTR-3'UTR Intra-chr p24.2 p24.2 Seq+ 87471 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFX3-GLDC RFX3 chr9 3525747 - GLDC chr9 6565429 - Exonic hg38 BRCA TCGA-EW-A3U0-01A 25 46 5'UTR-CDS Intra-chr p24.2 Transcription factor p24.1 Seq+ 87472 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRM1-STIM1 RRM1 chr11 4095031 + STIM1 chr11 4086477 + Exonic hg38 BRCA TCGA-EW-A3U0-01A 11 63 5'UTR-CDS Intra-chr p15.4 Oncogene p15.4 Seq+ 87473 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAEA-TMEM71 MAEA chr4 1315600 + TMEM71 chr8 132685105 - Exonic hg38 BRCA TCGA-EW-A3U0-01A 13 43 CDS-3'UTR Inter-chr p16.3 q24.22 Seq+ 87474 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED25-AP2A1 MED25 chr19 49819296 + AP2A1 chr19 49781757 + Exonic hg38 BRCA TCGA-EW-A3U0-01A 11 51 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 87475 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC44A1-RAD23B SLC44A1 chr9 105361330 + RAD23B chr9 107306379 + Exonic hg38 BRCA TCGA-EW-A3U0-01A 9 35 In-Frame Intra-chr q31.1 q31.2 Tumor suppressor gene Seq+ 87476 ChimerSeq TCGA FAWG TCGA_RNA-Seq PATJ-ST6GALNAC5 PATJ chr1 61742555 + ST6GALNAC5 chr1 77062975 + Exonic hg38 BRCA TCGA-EW-A3U0-01A 5 49 5'UTR-CDS Intra-chr p31.3 p31.1 87477 ChimerSeq TCGA FAWG TCGA_RNA-Seq HACD3-ANKDD1A HACD3 chr15 65530718 + ANKDD1A chr15 64930822 + Exonic hg38 BRCA TCGA-EW-A3U0-01A 4 44 In-Frame Intra-chr q22.31 q22.31 87478 ChimerSeq TCGA FAWG TCGA_RNA-Seq SESTD1-ZNF385B SESTD1 chr2 179264499 - ZNF385B chr2 179770672 - Exonic hg38 BRCA TCGA-EW-A3U0-01A 10 17 5'UTR-5'UTR Intra-chr q31.2 q31.3 Transcription factor Seq+ 87479 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT14-SF3B6 GALNT14 chr2 30910948 - SF3B6 chr2 24068459 - Exonic hg38 BRCA TCGA-EW-A3U0-01A 8 18 In-Frame Intra-chr p23.1 p23.3 87480 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMD4B-SIPA1L3 SAMD4B chr19 39357089 + SIPA1L3 chr19 38198389 + Exonic hg38 BRCA TCGA-EW-A3U0-01A 4 30 In-Frame Intra-chr q13.2 q13.13 Seq+ 87481 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRA2A-HECW1 TRA2A chr7 23521707 - HECW1 chr7 43311763 + Exonic hg38 BRCA TCGA-EW-A3U0-01A 4 23 Out-of-frame Intra-chr p15.3 p14.1 Seq+ 87482 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-C19orf57 PVT1 chr8 127890998 + C19orf57 chr19 13893223 - Exonic hg38 BRCA TCGA-EW-A3U0-01A 4 19 5'UTR-5'UTR Inter-chr q24.21 p13.12 Seq+ 87483 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLGB1-CCDC58 GOLGB1 chr3 121690670 - CCDC58 chr3 122371800 - Exonic hg38 BRCA TCGA-EW-A3U0-01A 4 8 In-Frame Intra-chr q13.33 q21.1 Seq+ 87484 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSTD1-ARHGAP30 TSTD1 chr1 161038880 - ARHGAP30 chr1 161052797 - Exonic hg38 BRCA TCGA-EW-A3U0-01A 3 10 In-Frame Intra-chr q23.3 q23.3 Seq+ 87485 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRDM11-ACCS PRDM11 chr11 45183123 + ACCS chr11 44067628 + Exonic hg38 BRCA TCGA-EW-A3U0-01A 2 12 CDS-5'UTR Intra-chr p11.2 Tumor suppressor gene p11.2 Seq+ 87486 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICAL3-CCDC188 MICAL3 chr22 18001393 - CCDC188 chr22 20149640 - Exonic hg38 BRCA TCGA-EW-A3U0-01A 3 7 5'UTR-CDS Intra-chr q11.21 q11.21 87487 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNGTT-MDN1 RNGTT chr6 88844357 - MDN1 chr6 89664628 - Exonic hg38 BRCA TCGA-EW-A3U0-01A 2 8 In-Frame Intra-chr q15 q15 Seq+ 87488 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM263-RFX4 TMEM263 chr12 106967180 + RFX4 chr12 106639332 + Exonic hg38 BRCA TCGA-EW-A3U0-01A 2 6 In-Frame Intra-chr q23.3 q23.3 Transcription factor 87489 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L4A-MCC EPB41L4A chr5 112418941 - MCC chr5 113122826 - Exonic hg38 BRCA TCGA-EW-A3U0-01A 2 5 Out-of-frame Intra-chr q22.2 q22.2 Tumor suppressor gene 87490 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT16-RAD51B GALNT16 chr14 69348002 + RAD51B chr14 68411424 + Exonic hg38 BRCA TCGA-EW-A3U0-01A 1 9 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 87491 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D14-EVC TBC1D14 chr4 6924111 + EVC chr4 5801950 + Exonic hg38 BRCA TCGA-EW-A3U0-01A 2 5 Out-of-frame Intra-chr p16.1 p16.2 Seq+ 87492 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDB1-PCGF6 LDB1 chr10 102120086 - PCGF6 chr10 103326632 - Exonic hg38 BRCA TCGA-EW-A3U0-01A 2 3 Out-of-frame Intra-chr q24.32 q24.33 Transcription factor 87493 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCA1-HDHD3 ABCA1 chr9 104927935 - HDHD3 chr9 113375567 - Exonic hg38 BRCA TCGA-EW-A3U0-01A 1 3 5'UTR-5'UTR Intra-chr q31.1 q32 Seq+ 87494 ChimerSeq TCGA FAWG TCGA_RNA-Seq PODXL-PCDH15 PODXL chr7 131556260 - PCDH15 chr10 54527877 - Exonic hg38 BRCA TCGA-EW-A3U0-01A 1 3 In-Frame Inter-chr q32.3 q21.1 87495 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKP1-UBE2T PKP1 chr1 201328652 + UBE2T chr1 202341980 - Exonic hg38 BRCA TCGA-EW-A3U0-01A 1000 1000 Out-of-frame Intra-chr q32.1 q32.1 87496 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6R3-GUCY2EP PPP6R3 chr11 68519651 + GUCY2EP chr11 76713186 - Exonic hg38 BRCA TCGA-EW-A423-01A 2 27 5'UTR-3'UTR Intra-chr q13.2 q13.5 87497 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD30A-FAM227B ANKRD30A chr10 37181516 + FAM227B chr15 49331849 - Exonic hg38 BRCA TCGA-EW-A423-01A 1 24 Out-of-frame Inter-chr p11.21 q21.2 87498 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF169-ANAPC15 RNF169 chr11 74789699 + ANAPC15 chr11 72111496 - Exonic hg38 BRCA TCGA-EW-A423-01A 3 6 CDS-5'UTR Intra-chr q13.4 q13.4 Seq+ 87499 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF280D-RNF111 ZNF280D chr15 56642952 - RNF111 chr15 59092537 + Exonic hg38 BRCA TCGA-EW-A423-01A 1 9 In-Frame Intra-chr q21.3 Transcription factor q22.1 Tumor suppressor gene Seq+ 87500 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC35E4-HSCB SLC35E4 chr22 30637069 + HSCB chr22 28751241 + Exonic hg38 BRCA TCGA-EW-A423-01A 1 4 In-Frame Intra-chr q12.2 q12.1 87501 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE3D-SERPINB1 UBE3D chr6 83065642 - SERPINB1 chr6 2840594 - Exonic hg38 BRCA TCGA-EW-A424-01A 6 16 5'UTR-5'UTR Intra-chr q14.1 p25.2 Seq+ 87502 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS19BP1-KCNE1 RPS19BP1 chr22 39532395 - KCNE1 chr21 34458736 - Exonic hg38 BRCA TCGA-EW-A424-01A 3 9 CDS-5'UTR Inter-chr q13.1 q22.12 Seq+ 87503 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARA-COL10A1 RARA chr17 40331396 + COL10A1 chr6 116125507 - Exonic hg38 BRCA TCGA-EW-A6S9-01A 17 53 CDS-5'UTR Inter-chr q21.2 Oncogene Transcription factor q22.1 Seq+ 87504 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARA-TSPYL4 RARA chr17 40331396 + TSPYL4 chr6 116250418 - Exonic hg38 BRCA TCGA-EW-A6S9-01A 10 81 CDS-3'UTR Inter-chr q21.2 Oncogene Transcription factor q22.1 Seq+ 87505 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK12-JAK2 CDK12 chr17 39471763 + JAK2 chr9 5126333 + Exonic hg38 BRCA TCGA-EW-A6S9-01A 19 44 Out-of-frame Inter-chr q12 Oncogene p24.1 TK:JakA Oncogene Seq+ 87506 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4C-ARMC2 KDM4C chr9 6893232 + ARMC2 chr6 108899694 + Exonic hg38 BRCA TCGA-EW-A6S9-01A 4 19 Out-of-frame Inter-chr p24.1 q21 Seq+ 87507 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG5-AK9 ATG5 chr6 106248150 - AK9 chr6 109659413 - Exonic hg38 BRCA TCGA-EW-A6S9-01A 3 21 In-Frame Intra-chr q21 q21 Seq+ 87508 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAT5B-ACSF2 STAT5B chr17 42276248 - ACSF2 chr17 50460677 + Exonic hg38 BRCA TCGA-EW-A6S9-01A 4 3 5'UTR-5'UTR Intra-chr q21.2 Transcription factor q21.33 87509 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLK2P1-YWHAEP7 TLK2P1 chr17 34039341 - YWHAEP7 chr17 37855228 - Exonic hg38 BRCA TCGA-EW-A6S9-01A 3 6 Out-of-frame Intra-chr q12 87510 ChimerSeq TCGA FAWG TCGA_RNA-Seq NLK-DUSP14 NLK chr17 28043331 + DUSP14 chr17 37510677 + Exonic hg38 BRCA TCGA-EW-A6S9-01A 1 9 CDS-3'UTR Intra-chr q11.2 CMGC:MAPK q12 Seq+ 87511 ChimerSeq TCGA FAWG TCGA_RNA-Seq PMS1-GCG PMS1 chr2 189805754 + GCG chr2 162147514 - Exonic hg38 BRCA TCGA-EW-A6S9-01A 1 4 Out-of-frame Intra-chr q32.2 Oncogene q24.2 Seq+ 87512 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT6-FGF18 CNOT6 chr5 180494763 + FGF18 chr5 171436093 + Exonic hg38 BRCA TCGA-EW-A6S9-01A 1 3 5'UTR-CDS Intra-chr q35.3 q35.1 87513 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC61-FUT2 CCDC61 chr19 46008301 + FUT2 chr19 48702955 + Exonic hg38 BRCA TCGA-EW-A6S9-01A 1000 1000 CDS-5'UTR Intra-chr q13.32 q13.33 Seq+ 87514 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD5-ATG7 SETD5 chr3 9464672 + ATG7 chr3 11554811 + Exonic hg38 BRCA TCGA-EW-A6SA-01A 40 108 In-Frame Intra-chr p25.3 p25.3 Seq+ 87515 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCT8-LHX4 CCT8 chr21 29060541 - LHX4 chr1 180248285 + Exonic hg38 BRCA TCGA-EW-A6SA-01A 8 29 Out-of-frame Inter-chr q21.3 q25.2 Tumor suppressor gene Transcription factor Seq+ 87516 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRIP2-SERINC2 CRIP2 chr14 105474905 + SERINC2 chr1 31432967 + Exonic hg38 BRCA TCGA-EW-A6SA-01A 3 18 Out-of-frame Inter-chr q32.33 p35.2 Seq+ 87517 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNH1-LPGAT1 KCNH1 chr1 211018864 - LPGAT1 chr1 211829323 - Exonic hg38 BRCA TCGA-EW-A6SA-01A 4 13 CDS-5'UTR Intra-chr q32.3 Seq+ 87518 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCT8-ARHGEF25 CCT8 chr21 29067558 - ARHGEF25 chr12 57619309 + Exonic hg38 BRCA TCGA-EW-A6SA-01A 4 7 Out-of-frame Inter-chr q21.3 q13.3 87519 ChimerSeq TCGA FAWG TCGA_RNA-Seq DBNDD1-CRIP2 DBNDD1 chr16 90008784 - CRIP2 chr14 105478266 + Exonic hg38 BRCA TCGA-EW-A6SA-01A 2 14 In-Frame Inter-chr q24.3 q32.33 Seq+ 87520 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBNO2-CRIP2 SBNO2 chr19 1149369 - CRIP2 chr14 105478266 + Exonic hg38 BRCA TCGA-EW-A6SA-01A 3 7 5'UTR-5'UTR Inter-chr p13.3 q32.33 Seq+ 87521 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARC2-RAB3IP MARC2 chr1 220755120 + RAB3IP chr12 69812964 + Exonic hg38 BRCA TCGA-EW-A6SA-01A 1 8 In-Frame Inter-chr q41 q15 87522 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPATA5-MMRN1 SPATA5 chr4 123028395 + MMRN1 chr4 89951605 + Exonic hg38 BRCA TCGA-EW-A6SA-01A 1 5 Out-of-frame Intra-chr q28.1 q22.1 Seq+ 87523 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOA-SMCO1 RHOA chr3 49411820 - SMCO1 chr3 196509669 - Exonic hg38 BRCA TCGA-EW-A6SB-01A 18 36 5'UTR-CDS Intra-chr p21.31 Oncogene Tumor suppressor gene q29 Seq+ 87524 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPS1-SPAG1 TRPS1 chr8 115587001 - SPAG1 chr8 100240403 + Exonic hg38 BRCA TCGA-EW-A6SB-01A 7 26 In-Frame Intra-chr q23.3 Transcription factor q22.2 Seq+ 87525 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPZB-EMC1 CAPZB chr1 19356635 - EMC1 chr1 19227450 - Exonic hg38 BRCA TCGA-EW-A6SB-01A 6 17 In-Frame Intra-chr p36.13 p36.13 Seq+ 87526 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H7B-L3MBTL2 ZC3H7B chr22 41327364 + L3MBTL2 chr22 41209696 + Exonic hg38 BRCA TCGA-EW-A6SB-01A 3 15 In-Frame Intra-chr q13.2 q13.2 Seq+ 87527 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUBPL-SCFD1 NUBPL chr14 31565048 + SCFD1 chr14 30694773 + Exonic hg38 BRCA TCGA-EW-A6SB-01A 2 10 In-Frame Intra-chr q12 q12 Seq+ 87528 ChimerSeq TCGA FAWG TCGA_RNA-Seq UIMC1-PTPRO UIMC1 chr5 177006539 - PTPRO chr12 15557455 + Exonic hg38 BRCA TCGA-EW-A6SB-01A 1 11 5'UTR-CDS Inter-chr q35.2 Tumor suppressor gene p12.3 Seq+ 87529 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2Z-UTP18 UBE2Z chr17 48922937 + UTP18 chr17 51293903 + Exonic hg38 BRCA TCGA-EW-A6SC-01A 15 133 In-Frame Intra-chr q21.32 q21.33 Seq+ 87530 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLMN-EVL CLMN chr14 95319711 - EVL chr14 100084687 + Exonic hg38 BRCA TCGA-EW-A6SC-01A 25 85 Out-of-frame Intra-chr q32.13 q32.2 Seq+ 87531 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF169-CALCOCO2 RNF169 chr11 74817714 + CALCOCO2 chr17 48841698 + Exonic hg38 BRCA TCGA-EW-A6SC-01A 7 68 CDS-5'UTR Inter-chr q13.4 q21.32 Seq+ 87532 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM2A-GDPD4 KDM2A chr11 67215949 + GDPD4 chr11 77287420 - Exonic hg38 BRCA TCGA-EW-A6SC-01A 3 39 5'UTR-5'UTR Intra-chr q13.2 Transcription factor q13.5 87533 ChimerSeq TCGA FAWG TCGA_RNA-Seq CALCOCO2-RCOR2 CALCOCO2 chr17 48831078 + RCOR2 chr11 63916561 - Exonic hg38 BRCA TCGA-EW-A6SC-01A 12 2 5'UTR-5'UTR Inter-chr q21.32 q13.1 Seq+ 87534 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF1B-FLJ31356 TAF1B chr2 9845318 + FLJ31356 chr2 28387133 - Exonic hg38 BRCA TCGA-EW-A6SC-01A 6 24 CDS-3'UTR Intra-chr p25.1 p23.2 87535 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPCAT3-MYO15A LPCAT3 chr12 6981004 - MYO15A chr17 18135711 + Exonic hg38 BRCA TCGA-EW-A6SC-01A 2 4 Out-of-frame Inter-chr p13.31 p11.2 Seq+ 87536 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPF2-SP2 WIPF2 chr17 40219492 + SP2 chr17 47922962 + Exonic hg38 BRCA TCGA-EW-A6SD-01A 217 856 5'UTR-CDS Intra-chr q21.2 q21.32 Transcription factor Seq+ 87537 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKP2-DNM1L PKP2 chr12 32841028 - DNM1L chr12 32742589 + Exonic hg38 BRCA TCGA-EW-A6SD-01A 17 58 In-Frame Intra-chr p11.21 p11.21 Seq+ 87538 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRBA-PPARGC1A LRBA chr4 151014427 - PPARGC1A chr4 23884931 - Exonic hg38 BRCA TCGA-EW-A6SD-01A 8 18 In-Frame Intra-chr q31.3 p15.2 Seq+ 87539 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRPK1-ANKRD42 SRPK1 chr6 35920468 - ANKRD42 chr11 83227747 + Exonic hg38 BRCA TCGA-EW-A6SD-01A 3 31 Out-of-frame Inter-chr p21.31 CMGC:SRPK q14.1 Seq+ 87540 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSI2-DHX40 MSI2 chr17 57401471 + DHX40 chr17 59566627 + Exonic hg38 BRCA TCGA-EW-A6SD-01A 5 12 Out-of-frame Intra-chr q22 q23.1 Seq+ 87541 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOGA1-RBL1 SOGA1 chr20 36802856 - RBL1 chr20 36998929 - Exonic hg38 BRCA TCGA-EW-A6SD-01A 1 14 In-Frame Intra-chr q11.23 q11.23 Tumor suppressor gene Seq+ 87542 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM14B-TFAP2A TMEM14B chr6 10749698 + TFAP2A chr6 10400589 - Exonic hg38 BRCA TCGA-EW-A6SD-01A 3 6 In-Frame Intra-chr p24.2 p24.3 Tumor suppressor gene Transcription factor Seq+ 87543 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNC1-RHOT1 PITPNC1 chr17 67378202 + RHOT1 chr17 32171043 + Exonic hg38 BRCA TCGA-EW-A6SD-01A 3 4 Out-of-frame Intra-chr q24.2 q11.2 Seq+ 87544 ChimerSeq TCGA FAWG TCGA_RNA-Seq REV3L-ARHGEF25 REV3L chr6 111482750 - ARHGEF25 chr12 57614689 + Exonic hg38 BRCA TCGA-EW-A6SD-01A 1 8 Out-of-frame Inter-chr q21 q13.3 Seq+ 87545 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1D-TEX2 MYO1D chr17 32876778 - TEX2 chr17 64171199 - Exonic hg38 BRCA TCGA-GI-A2C8-01A 77 236 Out-of-frame Intra-chr q11.2 q23.3 Seq+ 87546 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBX1-LRRC52 PBX1 chr1 164563311 + LRRC52 chr1 165563505 + Exonic hg38 BRCA TCGA-GI-A2C8-01A 25 182 In-Frame Intra-chr q23.3 Oncogene Transcription factor q24.1 Seq+ 87547 ChimerSeq TCGA FAWG TCGA_RNA-Seq NT5C2-C10orf120 NT5C2 chr10 103174858 - C10orf120 chr10 122699667 - Exonic hg38 BRCA TCGA-GI-A2C8-01A 10 18 Out-of-frame Intra-chr q24.33 q26.13 Seq+ 87548 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC2-FAM222B TANC2 chr17 63074014 + FAM222B chr17 28766707 - Exonic hg38 BRCA TCGA-GI-A2C8-01A 4 26 CDS-5'UTR Intra-chr q23.2 q11.2 Seq+ 87549 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM2-SUPT6H R3HDM2 chr12 57395749 - SUPT6H chr17 28693696 + Exonic hg38 BRCA TCGA-GI-A2C8-01A 6 17 5'UTR-CDS Inter-chr q13.3 q11.2 Seq+ 87550 ChimerSeq TCGA FAWG TCGA_RNA-Seq WT1-SLC1A2 WT1 chr11 32435846 + SLC1A2 chr11 35317516 - Exonic hg38 BRCA TCGA-GI-A2C8-01A 3 16 5'UTR-5'UTR Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor p13 87551 ChimerSeq TCGA FAWG TCGA_RNA-Seq WT1-SLC1A2 WT1 chr11 32435846 + SLC1A2 chr11 35317516 - Exonic hg38 BRCA TCGA-GI-A2C8-01A 3 16 5'UTR-5'UTR Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor p13 87552 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRM2B-ZFPM2 RRM2B chr8 102218814 - ZFPM2 chr8 105419144 + Exonic hg38 BRCA TCGA-GI-A2C8-01A 3 6 Out-of-frame Intra-chr q22.3 q22.3 Transcription factor Seq+ 87553 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPD52-ANGPT1 TPD52 chr8 80171425 - ANGPT1 chr8 107322128 - Exonic hg38 BRCA TCGA-GI-A2C8-01A 3 5 Out-of-frame Intra-chr q21.13 q23.1 Seq+ 87554 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBXN1-C11orf80 UBXN1 chr11 62676813 - C11orf80 chr11 66816053 + Exonic hg38 BRCA TCGA-GI-A2C8-01A 2 9 In-Frame Intra-chr q12.3 q13.2 Seq+ 87555 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2K4-CD79B MAP2K4 chr17 12054991 + CD79B chr17 63931385 - Exonic hg38 BRCA TCGA-GI-A2C8-01A 3 4 Out-of-frame Intra-chr p12 STE:STE7 Oncogene Tumor suppressor gene q23.3 Oncogene Seq+ 87556 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDLIM1-SORBS1 PDLIM1 chr10 95290820 - SORBS1 chr10 95410777 - Exonic hg38 BRCA TCGA-GI-A2C8-01A 2 8 In-Frame Intra-chr q23.33 q24.1 Seq+ 87557 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDHX-ELF5 PDHX chr11 34960518 + ELF5 chr11 34493712 - Exonic hg38 BRCA TCGA-GI-A2C8-01A 1 7 Out-of-frame Intra-chr p13 p13 Transcription factor 87558 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELF5-EXT2 ELF5 chr11 34493479 - EXT2 chr11 44171611 + Exonic hg38 BRCA TCGA-GI-A2C8-01A 1 5 Out-of-frame Intra-chr p13 Transcription factor p11.2 Oncogene Tumor suppressor gene 87559 ChimerSeq TCGA FAWG TCGA_RNA-Seq KHDRBS3-ADI1 KHDRBS3 chr8 135582073 + ADI1 chr2 3500993 - Exonic hg38 BRCA TCGA-GI-A2C9-01A 29 77 CDS-5'UTR Inter-chr q24.23 Seq+ 87560 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMIZ1-NSMCE4A ZMIZ1 chr10 79216274 + NSMCE4A chr10 121974081 - Exonic hg38 BRCA TCGA-GI-A2C9-01A 11 40 In-Frame Intra-chr q22.3 q26.13 Seq+ 87561 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A22-POLR2L SLC25A22 chr11 794458 - POLR2L chr11 840480 - Exonic hg38 BRCA TCGA-GI-A2C9-01A 1 47 Out-of-frame Intra-chr p15.5 p15.5 87562 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADI1-KHDRBS3 ADI1 chr2 3513857 - KHDRBS3 chr8 135606955 + Exonic hg38 BRCA TCGA-GI-A2C9-01A 3 28 5'UTR-CDS Inter-chr q24.23 Seq+ 87563 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIATNB-TMEM230 MIATNB chr22 26672987 + TMEM230 chr20 5109445 - Exonic hg38 BRCA TCGA-GI-A2C9-01A 6 16 5'UTR-5'UTR Inter-chr q12.1 p12.3 87564 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIAT-TMEM230 MIAT chr22 26672987 + TMEM230 chr20 5109445 - Exonic hg38 BRCA TCGA-GI-A2C9-01A 6 15 5'UTR-5'UTR Inter-chr q12.1 p12.3 Seq+ 87565 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF4G3-DDOST EIF4G3 chr1 20941491 - DDOST chr1 20656187 - Exonic hg38 BRCA TCGA-GI-A2C9-01A 4 12 In-Frame Intra-chr p36.12 p36.12 Seq+ 87566 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK26-ZC4H2 STK26 chrX 132073093 + ZC4H2 chrX 64921988 - Exonic hg38 BRCA TCGA-GI-A2C9-01A 3 16 In-Frame Intra-chr q26.2 q11.2 87567 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF12-MGST2 TCF12 chr15 56921098 + MGST2 chr4 139678543 + Exonic hg38 BRCA TCGA-GI-A2C9-01A 3 16 In-Frame Inter-chr q21.3 Oncogene Transcription factor q31.1 Seq+ 87568 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTTN-ST8SIA1 CTTN chr11 70409960 + ST8SIA1 chr12 22066435 - Exonic hg38 BRCA TCGA-GI-A2C9-01A 2 19 CDS-3'UTR Inter-chr q13.3 p12.1 87569 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD99L2-ARHGAP36 CD99L2 chrX 150831231 - ARHGAP36 chrX 131081760 + Exonic hg38 BRCA TCGA-GI-A2C9-01A 4 9 In-Frame Intra-chr q28 q26.1 Seq+ 87570 ChimerSeq TCGA FAWG TCGA_RNA-Seq EP300-IPO5 EP300 chr22 41093098 + IPO5 chr13 97982503 + Exonic hg38 BRCA TCGA-GI-A2C9-01A 4 8 Out-of-frame Inter-chr q13.2 Oncogene q32.2 Seq+ 87571 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF2-HSD3B2 NF2 chr22 29604112 + HSD3B2 chr1 119415331 + Exonic hg38 BRCA TCGA-GI-A2C9-01A 3 8 5'UTR-5'UTR Inter-chr q12.2 Oncogene Tumor suppressor gene p12 Seq+ 87572 ChimerSeq TCGA FAWG TCGA_RNA-Seq EMP1-ETV6 EMP1 chr12 13196872 + ETV6 chr12 11890941 + Exonic hg38 BRCA TCGA-GI-A2C9-01A 1 14 5'UTR-CDS Intra-chr p13.1 Tumor suppressor gene p13.2 Tumor suppressor gene Transcription factor Seq+ 87573 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHBP1-MDH1 EHBP1 chr2 62943850 + MDH1 chr2 63604696 + Exonic hg38 BRCA TCGA-GI-A2C9-01A 3 2 In-Frame Intra-chr p15 p15 Seq+ 87574 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNAPC5-RPL4 SNAPC5 chr15 66497642 - RPL4 chr15 66503529 - Exonic hg38 BRCA TCGA-GI-A2C9-01A 1 9 In-Frame Intra-chr q22.31 Transcription factor q22.31 87575 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSK3B-MAATS1 GSK3B chr3 120093347 - MAATS1 chr3 119706809 + Exonic hg38 BRCA TCGA-GI-A2C9-01A 1 3 In-Frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q13.33 87576 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAA35-WDR74 NAA35 chr9 85962180 + WDR74 chr11 62833131 - Exonic hg38 BRCA TCGA-GI-A2C9-01A 1 3 In-Frame Inter-chr q21.33 q12.3 87577 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSGIN2-DECR1 OSGIN2 chr8 89914746 + DECR1 chr8 90017124 + Exonic hg38 BRCA TCGA-GI-A2C9-01A 1 3 In-Frame Intra-chr q21.3 q21.3 87578 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC23A2-RASSF2 SLC23A2 chr20 4970793 - RASSF2 chr20 4801062 - Exonic hg38 BRCA TCGA-GI-A2C9-01A 1 3 5'UTR-5'UTR Intra-chr p13 p13 Tumor suppressor gene 87579 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCA-RGS9 PRKCA chr17 66306127 + RGS9 chr17 65119152 + Exonic hg38 BRCA TCGA-GI-A2C9-01A 1 1 CDS-5'UTR Intra-chr q24.2 q24.1 Seq+ 87580 ChimerSeq TCGA FAWG TCGA_RNA-Seq TESMIN-SART1 TESMIN chr11 68738700 - SART1 chr11 65978600 + Exonic hg38 BRCA TCGA-GM-A2D9-01A 3 3 Out-of-frame Intra-chr q13.3 q13.1 87581 ChimerSeq TCGA FAWG TCGA_RNA-Seq BPTF-PEBP1 BPTF chr17 67964404 + PEBP1 chr12 118138039 + Exonic hg38 BRCA TCGA-GM-A2D9-01A 1 9 In-Frame Inter-chr q24.2 Transcription factor q24.23 Tumor suppressor gene 87582 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR3E-C16orf52 POLR3E chr16 22325795 + C16orf52 chr16 22087293 + Exonic hg38 BRCA TCGA-GM-A2DB-01A 65 42 Out-of-frame Intra-chr Seq+ 87583 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H4-POLR2I ZC3H4 chr19 47093970 - POLR2I chr19 36114412 - Exonic hg38 BRCA TCGA-GM-A2DB-01A 44 108 In-Frame Intra-chr q13.32 q13.12 Seq+ 87584 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHCR7-11 DHCR7 chr11 71443993 - 11 chr11 71582157 - Exonic hg38 BRCA TCGA-GM-A2DB-01A 8 37 3'UTR-5'UTR Intra-chr q13.4 87585 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHKG2-RPL27 PHKG2 chr16 30748490 + RPL27 chr17 42998749 + Exonic hg38 BRCA TCGA-GM-A2DB-01A 6 4 5'UTR-5'UTR Inter-chr p11.2 q21.31 Seq+ 87586 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM2-ILF3 DNM2 chr19 10823899 + ILF3 chr19 10688550 + Exonic hg38 BRCA TCGA-GM-A2DB-01A 2 15 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 87587 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2S1-GPHN EIF2S1 chr14 67374547 + GPHN chr14 66824474 + Exonic hg38 BRCA TCGA-GM-A2DB-01A 1 6 In-Frame Intra-chr q23.3 q23.3 Seq+ 87588 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPEN-DNAJC16 SPEN chr1 15922349 + DNAJC16 chr1 15567099 + Exonic hg38 BRCA TCGA-GM-A2DB-01A 1 3 In-Frame Intra-chr p36.21 Transcription factor p36.21 Seq+ 87589 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELMO3-ZDHHC1 ELMO3 chr16 67203583 + ZDHHC1 chr16 67395566 - Exonic hg38 BRCA TCGA-GM-A2DB-01A 1 2 In-Frame Intra-chr q22.1 q22.1 87590 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3GL1-ANKRD24 SH3GL1 chr19 4400324 - ANKRD24 chr19 4219591 + Exonic hg38 BRCA TCGA-GM-A2DC-01A 15 30 In-Frame Intra-chr p13.3 p13.3 Seq+ 87591 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSRB2-MALRD1 MSRB2 chr10 23110318 + MALRD1 chr10 19692282 + Exonic hg38 BRCA TCGA-GM-A2DC-01A 3 10 In-Frame Intra-chr p12.2 p12.31 87592 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMD4A-AS2 SAMD4A chr14 54702580 + AS2 chr14 51584283 - Exonic hg38 BRCA TCGA-GM-A2DC-01A 5 2 Out-of-frame Intra-chr q22.2 87593 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D5-TOP2B TBC1D5 chr3 17742481 - TOP2B chr3 25601225 - Exonic hg38 BRCA TCGA-GM-A2DD-01A 4 10 5'UTR-CDS Intra-chr p24.3 p24.2 Seq+ 87594 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZKSCAN1-CCDC136 ZKSCAN1 chr7 100015726 + CCDC136 chr7 128804650 + Exonic hg38 BRCA TCGA-GM-A2DD-01A 4 9 5'UTR-CDS Intra-chr q22.1 Transcription factor q32.1 Tumor suppressor gene Seq+ 87595 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK3-SLC25A21 MARK3 chr14 103475210 + SLC25A21 chr14 36875004 - Exonic hg38 BRCA TCGA-GM-A2DD-01A 2 6 Out-of-frame Intra-chr q32.32 CAMK:CAMKL q13.3 Seq+ 87596 ChimerSeq TCGA FAWG TCGA_RNA-Seq DUSP16-HEBP1 DUSP16 chr12 12562117 - HEBP1 chr12 12989415 - Exonic hg38 BRCA TCGA-GM-A2DD-01A 2 5 5'UTR-CDS Intra-chr p13.1 Seq+ 87597 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNA1D-PRKCD CACNA1D chr3 53501720 + PRKCD chr3 53183452 + Exonic hg38 BRCA TCGA-GM-A2DD-01A 1 3 In-Frame Intra-chr p21.1 p21.1 Tumor suppressor gene Seq+ 87598 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCC10-PPP2R5D ABCC10 chr6 43433360 + PPP2R5D chr6 43006463 + Exonic hg38 BRCA TCGA-GM-A2DD-01A 1 2 In-Frame Intra-chr p21.1 p21.1 Seq+ 87599 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUL4A-F7 CUL4A chr13 113219488 + F7 chr13 113113752 + Exonic hg38 BRCA TCGA-GM-A2DF-01A 10 87 5'UTR-CDS Intra-chr q34 q34 Seq+ 87600 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBGCP3-FARP1 TUBGCP3 chr13 112545699 - FARP1 chr13 98446098 + Exonic hg38 BRCA TCGA-GM-A2DF-01A 15 63 In-Frame Intra-chr q32.2 Seq+ 87601 ChimerSeq TCGA FAWG TCGA_RNA-Seq WAC-UBAC2 WAC chr10 28583505 + UBAC2 chr13 99314097 + Exonic hg38 BRCA TCGA-GM-A2DF-01A 12 42 Out-of-frame Inter-chr p12.1 q32.3 Seq+ 87602 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCHSD2-UQCC3 FCHSD2 chr11 73140031 - UQCC3 chr11 62671284 + Exonic hg38 BRCA TCGA-GM-A2DF-01A 3 12 CDS-5'UTR Intra-chr q13.4 q12.3 87603 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMBIM4-GRIP1 TMBIM4 chr12 66169855 - GRIP1 chr12 66445508 - Exonic hg38 BRCA TCGA-GM-A2DF-01A 3 10 In-Frame Intra-chr q14.3 q14.3 Seq+ 87604 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM5C-HSD17B10 KDM5C chrX 53217143 - HSD17B10 chrX 53432411 - Exonic hg38 BRCA TCGA-GM-A2DF-01A 2 3 In-Frame Intra-chr p11.22 Oncogene p11.22 Seq+ 87605 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF126-ODF3L2 RNF126 chr19 663047 - ODF3L2 chr19 464364 - Exonic hg38 BRCA TCGA-GM-A2DF-01A 1 7 Out-of-frame Intra-chr p13.3 p13.3 87606 ChimerSeq TCGA FAWG TCGA_RNA-Seq BBX-RB1 BBX chr3 107526398 + RB1 chr13 48360017 + Exonic hg38 BRCA TCGA-GM-A2DH-01A 9 42 5'UTR-CDS Inter-chr q13.12 Transcription factor q14.2 Oncogene Tumor suppressor gene Seq+ 87607 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRBA-DDX60L LRBA chr4 150415438 - DDX60L chr4 168492885 - Exonic hg38 BRCA TCGA-GM-A2DH-01A 3 8 CDS-5'UTR Intra-chr q31.3 q32.3 Seq+ 87608 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP5-PIGX SENP5 chr3 196903610 + PIGX chr3 196733759 + Exonic hg38 BRCA TCGA-GM-A2DH-01A 2 9 In-Frame Intra-chr q29 q29 Seq+ 87609 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIA-DCLK1 NFIA chr1 61332586 + DCLK1 chr13 35839176 - Exonic hg38 BRCA TCGA-GM-A2DH-01A 1 11 Out-of-frame Inter-chr p31.3 Transcription factor q13.3 CAMK:DCAMKL Seq+ 87610 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL12-HK1 METTL12 chr11 62665946 + HK1 chr10 69343827 + Exonic hg38 BRCA TCGA-GM-A2DH-01A 1 10 Out-of-frame Inter-chr q12.3 q22.1 87611 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEC-PASD1 TEC chr4 48269752 - PASD1 chrX 151620930 + Exonic hg38 BRCA TCGA-GM-A2DH-01A 2 6 5'UTR-CDS Inter-chr p11 TK:Tec Tumor suppressor gene q28 Seq+ 87612 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGF1R-ADPGK IGF1R chr15 98708107 + ADPGK chr15 72771845 - Exonic hg38 BRCA TCGA-GM-A2DK-01A 7 17 Out-of-frame Intra-chr q26.3 TK:InsR Oncogene q24.1 Seq+ 87613 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL1RAPL1-MAGEB10 IL1RAPL1 chrX 28789425 + MAGEB10 chrX 27817554 + Exonic hg38 BRCA TCGA-GM-A2DK-01A 2 4 CDS-5'UTR Intra-chr p21.3 p21.3 Seq+ 87614 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2K1-UCKL1 MAP2K1 chr15 66444707 + UCKL1 chr20 63946643 - Exonic hg38 BRCA TCGA-GM-A2DK-01A 1 4 Out-of-frame Inter-chr q22.31 STE:STE7 Oncogene q13.33 87615 ChimerSeq TCGA FAWG TCGA_RNA-Seq GGA3-ATF7 GGA3 chr17 75239789 - ATF7 chr12 53508027 - Exonic hg38 BRCA TCGA-GM-A2DL-01A 5 12 CDS-3'UTR Inter-chr q25.1 q13.13 Transcription factor Seq+ 87616 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF1D-TRIM49C TAF1D chr11 93741322 - TRIM49C chr11 90032397 + Exonic hg38 BRCA TCGA-GM-A2DL-01A 1 14 5'UTR-5'UTR Intra-chr q21 q14.3 87617 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF1D-TRIM49 TAF1D chr11 93741323 - TRIM49 chr11 89807285 - Exonic hg38 BRCA TCGA-GM-A2DL-01A 1000 1000 Out-of-frame Intra-chr q21 q14.3 Seq+ 87618 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUNDC1-CPB1 RUNDC1 chr17 42956263 + CPB1 chr3 148859971 + Exonic hg38 BRCA TCGA-GM-A2DM-01A 1000 1000 Out-of-frame Inter-chr q21.31 q24 87619 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP6AP1-CPB1 ATP6AP1 chrX 154436516 + CPB1 chr3 148834561 + Exonic hg38 BRCA TCGA-GM-A2DM-01A 1000 1000 3'UTR-CDS Inter-chr q28 q24 87620 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK2-CPB1 TAOK2 chr16 29986770 + CPB1 chr3 148854446 + Exonic hg38 BRCA TCGA-GM-A2DM-01A 1000 1000 Out-of-frame Inter-chr p11.2 q24 87621 ChimerSeq TCGA FAWG TCGA_RNA-Seq PROSC-DDHD2 PROSC chr8 37776016 + DDHD2 chr8 38225240 + Exonic hg38 BRCA TCGA-GM-A3NW-01A 3 34 Out-of-frame Intra-chr p11.23 Seq+ 87622 ChimerSeq TCGA FAWG TCGA_RNA-Seq OXCT1-DLEU2 OXCT1 chr5 41840451 - DLEU2 chr13 49997419 - Exonic hg38 BRCA TCGA-GM-A3NW-01A 3 8 3'UTR-3'UTR Inter-chr p13.1 q14.2 Tumor suppressor gene Seq+ 87623 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6R3-SPTBN2 PPP6R3 chr11 68460827 + SPTBN2 chr11 66715981 - Exonic hg38 BRCA TCGA-GM-A3NW-01A 2 6 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 87624 ChimerSeq TCGA FAWG TCGA_RNA-Seq THAP12-ADAM2 THAP12 chr11 76350225 - ADAM2 chr8 39777161 - Exonic hg38 BRCA TCGA-GM-A3NW-01A 1000 1000 3'UTR-5'UTR Inter-chr q13.5 Transcription factor 87625 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC66-FLNB CCDC66 chr3 56594028 + FLNB chr3 58102203 + Exonic hg38 BRCA TCGA-GM-A3NY-01A 1 7 Out-of-frame Intra-chr p14.3 p14.3 Seq+ 87626 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNF-MALL CCNF chr16 2433067 + MALL chr2 110085757 - Exonic hg38 BRCA TCGA-GM-A3XL-01A 16 57 Out-of-frame Inter-chr p13.3 q13 Seq+ 87627 ChimerSeq TCGA FAWG TCGA_RNA-Seq TC2N-ATXN3 TC2N chr14 91812312 - ATXN3 chr14 92050536 - Exonic hg38 BRCA TCGA-GM-A3XL-01A 19 19 5'UTR-3'UTR Intra-chr q32.12 Seq+ 87628 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD11-LINGO1 ANKRD11 chr16 89418284 - LINGO1 chr15 77615900 - Exonic hg38 BRCA TCGA-GM-A3XL-01A 11 41 5'UTR-5'UTR Inter-chr q24.3 q24.3 Seq+ 87629 ChimerSeq TCGA FAWG TCGA_RNA-Seq GUK1-TARBP1 GUK1 chr1 228140363 + TARBP1 chr1 234467650 - Exonic hg38 BRCA TCGA-GM-A3XL-01A 10 8 In-Frame Intra-chr q42.13 q42.2 Seq+ 87630 ChimerSeq TCGA FAWG TCGA_RNA-Seq WARS-MSH6 WARS chr14 100337062 - MSH6 chr2 47798611 + Exonic hg38 BRCA TCGA-GM-A3XL-01A 4 32 In-Frame Inter-chr q32.2 p16.3 Oncogene Seq+ 87631 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK1-KCNJ4 MAPK1 chr22 21805850 - KCNJ4 chr22 38428171 - Exonic hg38 BRCA TCGA-GM-A3XL-01A 7 13 CDS-5'UTR Intra-chr q11.22 Oncogene q13.1 Seq+ 87632 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR78-LRRC40 WDR78 chr1 66924662 - LRRC40 chr1 70189273 - Exonic hg38 BRCA TCGA-GM-A3XL-01A 1 10 Out-of-frame Intra-chr p31.3 p31.1 Seq+ 87633 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFDN-KCNAB1 AFDN chr6 167827237 + KCNAB1 chr3 156514364 + Exonic hg38 BRCA TCGA-HN-A2NL-01A 18 72 Out-of-frame Inter-chr q27 q25.31 87634 ChimerSeq TCGA FAWG TCGA_RNA-Seq HN1-GGA3 HN1 chr17 75146666 - GGA3 chr17 75246796 - Exonic hg38 BRCA TCGA-HN-A2NL-01A 8 27 Out-of-frame Intra-chr q25.1 Seq+ 87635 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX11-ITGA10 DDX11 chr12 31078537 + ITGA10 chr1 145907465 - Exonic hg38 BRCA TCGA-HN-A2NL-01A 2 4 Out-of-frame Inter-chr p11.21 q21.1 Oncogene Seq+ 87636 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM94-MRPL58 TMEM94 chr17 75456751 + MRPL58 chr17 75017078 + Exonic hg38 BRCA TCGA-JL-A3YW-01A 23 13 5'UTR-CDS Intra-chr q25.1 q25.1 87637 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSN-NLRC4 MSN chrX 65667853 + NLRC4 chr2 32235568 - Exonic hg38 BRCA TCGA-JL-A3YW-01A 3 57 Out-of-frame Inter-chr q12 p22.3 Seq+ 87638 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCMH1-EIF2B3 SCMH1 chr1 41113283 - EIF2B3 chr1 44851003 - Exonic hg38 BRCA TCGA-JL-A3YW-01A 10 17 In-Frame Intra-chr p34.2 Transcription factor p34.1 Seq+ 87639 ChimerSeq TCGA FAWG TCGA_RNA-Seq TC2N-ATXN3 TC2N chr14 91780576 - ATXN3 chr14 92096838 - Exonic hg38 BRCA TCGA-JL-A3YW-01A 4 13 5'UTR-CDS Intra-chr q32.12 Seq+ 87640 ChimerSeq TCGA FAWG TCGA_RNA-Seq SASH1-LPIN3 SASH1 chr6 148390262 + LPIN3 chr20 41345796 + Exonic hg38 BRCA TCGA-JL-A3YW-01A 4 7 5'UTR-5'UTR Inter-chr q24.3 Tumor suppressor gene q12 Seq+ 87641 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHB-SLC28A3 SHB chr9 38067929 - SLC28A3 chr9 84313454 - Exonic hg38 BRCA TCGA-JL-A3YW-01A 3 11 In-Frame Intra-chr p13.1 q21.33 Seq+ 87642 ChimerSeq TCGA FAWG TCGA_RNA-Seq SULT1B1-CSN2 SULT1B1 chr4 69730501 - CSN2 chr4 69959069 - Exonic hg38 BRCA TCGA-JL-A3YW-01A 2 5 Out-of-frame Intra-chr q13.3 Tumor suppressor gene Seq+ 87643 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPA1-LRRC20 PPA1 chr10 70217812 - LRRC20 chr10 70324030 - Exonic hg38 BRCA TCGA-JL-A3YW-01A 1 8 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 87644 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX24-SNCAIP SNX24 chr5 122845693 + SNCAIP chr5 122391089 + Exonic hg38 BRCA TCGA-JL-A3YW-01A 1 2 5'UTR-5'UTR Intra-chr q23.2 q23.2 Seq+ 87645 ChimerSeq TCGA FAWG TCGA_RNA-Seq PNISR-TAF1D PNISR chr6 99410741 - TAF1D chr11 93732291 - Exonic hg38 BRCA TCGA-JL-A3YW-01A 1 1 3'UTR-3'UTR Inter-chr q16.2 q21 87646 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO5A-OIP5 MYO5A chr15 52397201 - OIP5 chr15 41319780 - Exonic hg38 BRCA TCGA-JL-A3YX-01A 6 11 In-Frame Intra-chr q21.2 q15.1 Seq+ 87647 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGN1-RORA HMGN1 chr21 39348292 - RORA chr15 61176456 - Exonic hg38 BRCA TCGA-LD-A74U-01A 3 43 CDS-5'UTR Inter-chr q22.2 q22.2 Transcription factor 87648 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR2-ENPP2 FGFR2 chr10 121515123 - ENPP2 chr8 119638527 - Exonic hg38 BRCA TCGA-LD-A7W5-01A 36 116 In-Frame Inter-chr q26.13 TK:FGFR Oncogene q24.12 Seq+ 87649 ChimerSeq TCGA FAWG TCGA_RNA-Seq C10orf11-RUFY2 C10orf11 chr10 75438494 + RUFY2 chr10 68364113 - Exonic hg38 BRCA TCGA-LD-A7W5-01A 26 115 Out-of-frame Intra-chr q21.3 Seq+ 87650 ChimerSeq TCGA FAWG TCGA_RNA-Seq GID4-FDXR GID4 chr17 18039902 + FDXR chr17 74866876 - Exonic hg38 BRCA TCGA-LD-A7W5-01A 13 53 In-Frame Intra-chr p11.2 q25.1 Seq+ 87651 ChimerSeq TCGA FAWG TCGA_RNA-Seq TECTB-ATRNL1 TECTB chr10 112286391 + ATRNL1 chr10 115727248 + Exonic hg38 BRCA TCGA-LD-A7W5-01A 8 3 In-Frame Intra-chr q25.2 q25.3 Seq+ 87652 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDCD7-TAF15 PDCD7 chr15 65129032 - TAF15 chr17 35817716 + Exonic hg38 BRCA TCGA-LD-A7W5-01A 3 16 CDS-3'UTR Inter-chr q22.31 q12 Seq+ 87653 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIO-FAM53B TRIO chr5 14336727 + FAM53B chr10 124623604 - Exonic hg38 BRCA TCGA-LD-A7W5-01A 1 18 In-Frame Inter-chr p15.2 q26.13 Seq+ 87654 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTBP1-POLN CTBP1 chr4 1238183 - POLN chr4 2095933 - Exonic hg38 BRCA TCGA-LD-A7W5-01A 3 5 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 87655 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMG1-MON2 SMG1 chr16 18868523 - MON2 chr12 62585294 + Exonic hg38 BRCA TCGA-LD-A7W5-01A 1 3 Out-of-frame Inter-chr p12.3 Atypical:PIKK q14.1 87656 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCBP2-TMED2 PCBP2 chr12 53468832 + TMED2 chr12 123597928 + Exonic hg38 BRCA TCGA-LD-A7W6-01A 6 46 CDS-3'UTR Intra-chr q13.13 q24.31 Seq+ 87657 ChimerSeq TCGA FAWG TCGA_RNA-Seq NR2C2AP-MAP1S NR2C2AP chr19 19201931 - MAP1S chr19 17725049 + Exonic hg38 BRCA TCGA-LD-A7W6-01A 4 45 In-Frame Intra-chr p13.11 p13.11 Seq+ 87658 ChimerSeq TCGA FAWG TCGA_RNA-Seq EMSY-LRP5 EMSY chr11 76464080 + LRP5 chr11 68386316 + Exonic hg38 BRCA TCGA-LD-A7W6-01A 7 20 Out-of-frame Intra-chr q13.5 q13.2 87659 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB6A-SHANK2 RAB6A chr11 73716251 - SHANK2 chr11 70698763 - Exonic hg38 BRCA TCGA-LD-A7W6-01A 1 2 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 87660 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNHG12-YIPF1 SNHG12 chr1 28581590 - YIPF1 chr1 53860153 - Exonic hg38 BRCA TCGA-LD-A9QF-01A 41 154 3'UTR-3'UTR Intra-chr p35.3 p32.3 Seq+ 87661 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED1-ANKFN1 MED1 chr17 39447798 - ANKFN1 chr17 56184749 + Exonic hg38 BRCA TCGA-LD-A9QF-01A 27 85 CDS-5'UTR Intra-chr q12 Tumor suppressor gene q22 Seq+ 87662 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSI2-TOB1 MSI2 chr17 57627303 + TOB1 chr17 50864163 - Exonic hg38 BRCA TCGA-LD-A9QF-01A 1 21 CDS-5'UTR Intra-chr q22 q21.33 Seq+ 87663 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPOP-RARA SPOP chr17 49677933 - RARA chr17 40330857 + Exonic hg38 BRCA TCGA-LD-A9QF-01A 3 6 5'UTR-5'UTR Intra-chr q21.33 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor Seq+ 87664 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD3-IKZF3 STARD3 chr17 39661085 + IKZF3 chr17 39792933 - Exonic hg38 BRCA TCGA-LD-A9QF-01A 2 9 Out-of-frame Intra-chr q12 q21.1 Tumor suppressor gene Transcription factor Seq+ 87665 ChimerSeq TCGA FAWG TCGA_RNA-Seq DEK-NUP210L DEK chr6 18249651 - NUP210L chr1 154027597 - Exonic hg38 BRCA TCGA-LD-A9QF-01A 1 5 In-Frame Inter-chr p22.3 Oncogene q21.3 Seq+ 87666 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK12-ANKRD13B CDK12 chr17 39471763 + ANKRD13B chr17 29607742 + Exonic hg38 BRCA TCGA-LD-A9QF-01A 1 3 Out-of-frame Intra-chr q12 Oncogene q11.2 87667 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHKA-PC CHKA chr11 68097019 - PC chr11 66872159 - Exonic hg38 BRCA TCGA-LL-A440-01A 3 42 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 87668 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDCA2-ADAM28 CDCA2 chr8 25503544 + ADAM28 chr8 24308641 + Exonic hg38 BRCA TCGA-LL-A440-01A 1 9 CDS-5'UTR Intra-chr p21.2 p21.2 Seq+ 87669 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLPB-SHANK2 CLPB chr11 72358880 - SHANK2 chr11 70698763 - Exonic hg38 BRCA TCGA-LL-A441-01A 9 27 In-Frame Intra-chr q13.4 q13.4 Seq+ 87670 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGAPB-CNBD2 RALGAPB chr20 38473069 + CNBD2 chr20 36030357 + Exonic hg38 BRCA TCGA-LL-A441-01A 6 9 5'UTR-5'UTR Intra-chr q11.23 q11.23 Seq+ 87671 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0232-INPP4B KIAA0232 chr4 6824684 + INPP4B chr4 142028914 - Exonic hg38 BRCA TCGA-LL-A441-01A 3 12 Out-of-frame Intra-chr p16.1 q31.21 Tumor suppressor gene Seq+ 87672 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNK1-WNT5B WNK1 chr12 830160 + WNT5B chr12 1631298 + Exonic hg38 BRCA TCGA-LL-A441-01A 2 12 CDS-5'UTR Intra-chr p13.33 p13.33 Seq+ 87673 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLMAP-ELN SLMAP chr3 57890100 + ELN chr7 74065694 + Exonic hg38 BRCA TCGA-LL-A441-01A 1 15 In-Frame Inter-chr p14.3 q11.23 87674 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLPB-PDE2A CLPB chr11 72358880 - PDE2A chr11 72642326 - Exonic hg38 BRCA TCGA-LL-A441-01A 2 5 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 87675 ChimerSeq TCGA FAWG TCGA_RNA-Seq H3F3B-TRIM47 H3F3B chr17 75778106 - TRIM47 chr17 75878504 - Exonic hg38 BRCA TCGA-LL-A5YM-01A 164 209 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 87676 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL1A1-CPB1 COL1A1 chr17 50184532 - CPB1 chr3 148859887 + Exonic hg38 BRCA TCGA-LL-A5YM-01A 3 4 Out-of-frame Inter-chr q21.33 Oncogene q24 Seq+ 87677 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED1-ODF3L2 MED1 chr17 39447798 - ODF3L2 chr19 464364 - Exonic hg38 BRCA TCGA-LL-A5YN-01A 12 88 Out-of-frame Inter-chr q12 Tumor suppressor gene p13.3 Seq+ 87678 ChimerSeq TCGA FAWG TCGA_RNA-Seq HERC1-PCLAF HERC1 chr15 63677845 - PCLAF chr15 64366075 - Exonic hg38 BRCA TCGA-LL-A5YN-01A 2 28 In-Frame Intra-chr q22.31 q22.31 87679 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKAL1-AS2 CDKAL1 chr6 20548705 + AS2 chr13 29239958 - Exonic hg38 BRCA TCGA-LL-A5YN-01A 5 12 Out-of-frame Inter-chr p22.3 87680 ChimerSeq TCGA FAWG TCGA_RNA-Seq RABEP1-CDRT8 RABEP1 chr17 5308822 + CDRT8 chr17 15105543 - Exonic hg38 BRCA TCGA-LL-A5YN-01A 4 6 CDS-3'UTR Intra-chr p13.2 p12 87681 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPV6-KEL TRPV6 chr7 142885389 - KEL chr7 142943883 - Exonic hg38 BRCA TCGA-LL-A5YO-01A 12 66 5'UTR-5'UTR Intra-chr q34 Seq+ 87682 ChimerSeq TCGA FAWG TCGA_RNA-Seq BSPRY-NPM1 BSPRY chr9 113360737 + NPM1 chr5 171410527 + Exonic hg38 BRCA TCGA-LL-A5YO-01A 1 32 In-Frame Inter-chr q32 q35.1 Oncogene Tumor suppressor gene Seq+ 87683 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCBP3-CAMKK1 NCBP3 chr17 3843086 - CAMKK1 chr17 3880434 - Exonic hg38 BRCA TCGA-LL-A5YP-01A 4 25 Out-of-frame Intra-chr p13.2 p13.2 87684 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUPT6H-UTP6 SUPT6H chr17 28662342 + UTP6 chr17 31875413 - Exonic hg38 BRCA TCGA-LL-A5YP-01A 2 7 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 87685 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSF1-FBXW4 RSF1 chr11 77820528 - FBXW4 chr10 101676436 - Exonic hg38 BRCA TCGA-LL-A5YP-01A 1 7 Out-of-frame Inter-chr q14.1 q24.32 87686 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGK-ST6GALNAC3 PIGK chr1 77154449 - ST6GALNAC3 chr1 76412008 + Exonic hg38 BRCA TCGA-LL-A6FP-01A 1 5 Out-of-frame Intra-chr p31.1 p31.1 Seq+ 87687 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCB3-PGA5 PLCB3 chr11 64255616 + PGA5 chr11 61245946 + Exonic hg38 BRCA TCGA-LL-A6FQ-01A 37 49 In-Frame Intra-chr q13.1 Tumor suppressor gene q12.2 Seq+ 87688 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEU3-POLA2 NEU3 chr11 74994720 + POLA2 chr11 65275892 + Exonic hg38 BRCA TCGA-LL-A6FQ-01A 10 16 In-Frame Intra-chr q13.4 q13.1 Seq+ 87689 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP5-MADD LRP5 chr11 68441381 + MADD chr11 47323671 + Exonic hg38 BRCA TCGA-LL-A6FQ-01A 3 19 Out-of-frame Intra-chr q13.2 p11.2 Tumor suppressor gene Seq+ 87690 ChimerSeq TCGA FAWG TCGA_RNA-Seq C11orf49-PPME1 C11orf49 chr11 46936851 + PPME1 chr11 74230245 + Exonic hg38 BRCA TCGA-LL-A6FQ-01A 2 12 In-Frame Intra-chr p11.2 q13.4 Seq+ 87691 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELF1-LUZP2 CELF1 chr11 47499453 - LUZP2 chr11 25050038 + Exonic hg38 BRCA TCGA-LL-A6FQ-01A 2 8 Out-of-frame Intra-chr p11.2 p14.3 Seq+ 87692 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACLY-DNAJC7 ACLY chr17 41901696 - DNAJC7 chr17 41977323 - Exonic hg38 BRCA TCGA-LL-A6FR-01A 147 483 In-Frame Intra-chr q21.2 q21.2 Seq+ 87693 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL38-KIF19 RPL38 chr17 74204190 + KIF19 chr17 74328425 + Exonic hg38 BRCA TCGA-LL-A6FR-01A 3 3 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 87694 ChimerSeq TCGA FAWG TCGA_RNA-Seq PATZ1-PKIB PATZ1 chr22 31342897 - PKIB chr6 122585921 + Exonic hg38 BRCA TCGA-LL-A6FR-01A 1 5 CDS-5'UTR Inter-chr q12.2 Transcription factor q22.31 Seq+ 87695 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYH9-C22orf31 MYH9 chr22 36387807 - C22orf31 chr22 29060843 - Exonic hg38 BRCA TCGA-LL-A6FR-01A 1 3 5'UTR-CDS Intra-chr q12.3 Oncogene Tumor suppressor gene q12.1 87696 ChimerSeq TCGA FAWG TCGA_RNA-Seq FUBP1-LRRC7 FUBP1 chr1 77966694 - LRRC7 chr1 69678381 + Exonic hg38 BRCA TCGA-LL-A73Y-01A 4 10 In-Frame Intra-chr p31.1 Oncogene p31.1 Seq+ 87697 ChimerSeq TCGA FAWG TCGA_RNA-Seq TDRD3-LHFP TDRD3 chr13 60397405 + LHFP chr13 39378526 - Exonic hg38 BRCA TCGA-LL-A73Y-01A 2 7 Out-of-frame Intra-chr q21.2 q14.11 Seq+ 87698 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHTN1-FAM24B SHTN1 chr10 117005022 - FAM24B chr10 122855786 - Exonic hg38 BRCA TCGA-LL-A73Z-01A 3 18 5'UTR-5'UTR Intra-chr q25.3 q26.13 87699 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIVEP1-DST HIVEP1 chr6 12135892 + DST chr6 56460254 - Exonic hg38 BRCA TCGA-LL-A740-01A 5 21 Out-of-frame Intra-chr p24.1 Tumor suppressor gene Transcription factor p12.1 Oncogene Seq+ 87700 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP153-NEDD9 NUP153 chr6 17688396 - NEDD9 chr6 11306155 - Exonic hg38 BRCA TCGA-LL-A740-01A 6 8 CDS-5'UTR Intra-chr p22.3 p24.2 Seq+ 87701 ChimerSeq TCGA FAWG TCGA_RNA-Seq E2F3-FBXO9 E2F3 chr6 20403832 + FBXO9 chr6 53071057 + Exonic hg38 BRCA TCGA-LL-A740-01A 1 26 In-Frame Intra-chr p22.3 Tumor suppressor gene Transcription factor p12.1 Seq+ 87702 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBNO1-CLSPN SBNO1 chr12 123309710 - CLSPN chr1 35720980 - Exonic hg38 BRCA TCGA-LL-A740-01A 2 18 Out-of-frame Inter-chr q24.31 p34.3 Seq+ 87703 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICA-TMEM232 MICA chr6 31400763 + TMEM232 chr5 110289440 - Exonic hg38 BRCA TCGA-LL-A7SZ-01A 11 72 3'UTR-3'UTR Inter-chr p21.33 q22.1 Seq+ 87704 ChimerSeq TCGA FAWG TCGA_RNA-Seq HCP5-TMEM232 HCP5 chr6 31400763 + TMEM232 chr5 110289440 - Exonic hg38 BRCA TCGA-LL-A7SZ-01A 11 32 Out-of-frame Inter-chr p21.33 q22.1 Seq+ 87705 ChimerSeq TCGA FAWG TCGA_RNA-Seq BIRC6-RMDN2 BIRC6 chr2 32597968 + RMDN2 chr2 38066982 + Exonic hg38 BRCA TCGA-LL-A7SZ-01A 5 38 In-Frame Intra-chr p22.3 p22.2 Seq+ 87706 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX57-DNAJC5B DHX57 chr2 38875787 - DNAJC5B chr8 66043488 + Exonic hg38 BRCA TCGA-LL-A7SZ-01A 5 7 5'UTR-5'UTR Inter-chr p22.1 q13.1 Seq+ 87707 ChimerSeq TCGA FAWG TCGA_RNA-Seq VAPB-CDH12 VAPB chr20 58434705 + CDH12 chr5 21802420 - Exonic hg38 BRCA TCGA-LL-A7SZ-01A 2 8 In-Frame Inter-chr q13.32 p14.3 Seq+ 87708 ChimerSeq TCGA FAWG TCGA_RNA-Seq BIRC6-ABCC11 BIRC6 chr2 32513154 + ABCC11 chr16 48177113 - Exonic hg38 BRCA TCGA-LL-A7SZ-01A 2 7 Out-of-frame Inter-chr p22.3 q12.1 Seq+ 87709 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZZEF1-SMG6 ZZEF1 chr17 4088678 - SMG6 chr17 2085901 - Exonic hg38 BRCA TCGA-LL-A7SZ-01A 2 3 In-Frame Intra-chr p13.2 p13.3 87710 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH2L-ZFYVE28 ASH2L chr8 38119363 + ZFYVE28 chr4 2341615 - Exonic hg38 BRCA TCGA-LL-A7T0-01A 5 46 Out-of-frame Inter-chr p11.23 p16.3 Seq+ 87711 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDLIM5-SHISA5 PDLIM5 chr4 94618191 + SHISA5 chr3 48501293 - Exonic hg38 BRCA TCGA-LL-A7T0-01A 4 13 In-Frame Inter-chr q22.3 p21.31 Seq+ 87712 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDLIM5-ART3 PDLIM5 chr4 94455384 + ART3 chr4 76075881 + Exonic hg38 BRCA TCGA-LL-A7T0-01A 2 8 5'UTR-5'UTR Intra-chr q22.3 q21.1 Seq+ 87713 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMAN2L-MRPS5 LMAN2L chr2 96733519 - MRPS5 chr2 95108408 - Exonic hg38 BRCA TCGA-LL-A7T0-01A 2 5 Out-of-frame Intra-chr q11.2 q11.1 Seq+ 87714 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4K4-LYG2 MAP4K4 chr2 101844311 + LYG2 chr2 99245458 - Exonic hg38 BRCA TCGA-LL-A7T0-01A 1 5 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 87715 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD5-LMCD1 SETD5 chr3 9442245 + LMCD1 chr3 8532737 + Exonic hg38 BRCA TCGA-LL-A8F5-01A 4 17 In-Frame Intra-chr p25.3 p25.3 Seq+ 87716 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARSJ-DNAH9 ARSJ chr4 113903253 - DNAH9 chr17 11925429 + Exonic hg38 BRCA TCGA-LL-A8F5-01A 3 11 Out-of-frame Inter-chr q26 p12 87717 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSE1-NONO GSE1 chr16 85613398 + NONO chrX 71290629 + Exonic hg38 BRCA TCGA-LL-A8F5-01A 1 6 CDS-5'UTR Inter-chr q24.1 q13.1 87718 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2F-RAMP1 UBE2F chr2 238016633 + RAMP1 chr2 237911528 + Exonic hg38 BRCA TCGA-LL-A9Q3-01A 35 116 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 87719 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D13-ODF2 TBC1D13 chr9 128797214 + ODF2 chr9 128482816 + Exonic hg38 BRCA TCGA-LL-A9Q3-01A 10 39 In-Frame Intra-chr q34.11 q34.11 Seq+ 87720 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALT1-AQP7 B4GALT1 chr9 33166758 - AQP7 chr9 33386541 - Exonic hg38 BRCA TCGA-LL-A9Q3-01A 1 3 In-Frame Intra-chr p21.1 p13.3 Seq+ 87721 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANBP3-EEF1AKMT1 RANBP3 chr19 5978061 - EEF1AKMT1 chr13 20732121 - Exonic hg38 BRCA TCGA-MS-A51U-01A 3 64 Out-of-frame Inter-chr p13.3 q12.11 87722 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHDDS-PSMB2 DHDDS chr1 26433008 + PSMB2 chr1 35636432 - Exonic hg38 BRCA TCGA-OK-A5Q2-01A 4 18 Out-of-frame Intra-chr p36.11 p34.3 Seq+ 87723 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND1B-RRP15 DENND1B chr1 197772868 - RRP15 chr1 218302294 + Exonic hg38 BRCA TCGA-OK-A5Q2-01A 1 13 In-Frame Intra-chr q31.3 q41 Seq+ 87724 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEK7-INTS7 NEK7 chr1 198264235 + INTS7 chr1 211942111 - Exonic hg38 BRCA TCGA-OK-A5Q2-01A 1 11 In-Frame Intra-chr q31.3 Other:NEK q32.3 Seq+ 87725 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNAI1-SLC9A8 SNAI1 chr20 49983141 + SLC9A8 chr20 49862929 + Exonic hg38 BRCA TCGA-OL-A5D6-01A 16 167 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 Seq+ 87726 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTF1-SNX24 RTF1 chr15 41417313 + SNX24 chr5 122936734 + Exonic hg38 BRCA TCGA-OL-A5D6-01A 1 1 In-Frame Inter-chr q15.1 q23.2 87727 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAN1A2-CD101 MAN1A2 chr1 117466427 + CD101 chr1 117033860 + Exonic hg38 BRCA TCGA-OL-A5D7-01A 42 117 In-Frame Intra-chr p12 p13.1 Seq+ 87728 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHAF1A-CCDC94 CHAF1A chr19 4428890 + CCDC94 chr19 4261994 + Exonic hg38 BRCA TCGA-OL-A5D7-01A 33 145 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 87729 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIP5K1C-PALM PIP5K1C chr19 3660966 - PALM chr19 746285 + Exonic hg38 BRCA TCGA-OL-A5D7-01A 18 56 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 87730 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTMR1-HS1BP3 MTMR1 chrX 150755865 + HS1BP3 chr2 20641180 - Exonic hg38 BRCA TCGA-OL-A5D7-01A 14 61 In-Frame Inter-chr q28 p24.1 Seq+ 87731 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF664-AKR1C2 ZNF664 chr12 124012475 + AKR1C2 chr10 5006592 - Exonic hg38 BRCA TCGA-OL-A5D7-01A 12 67 Out-of-frame Inter-chr q24.31 Transcription factor p15.1 87732 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRYL-DTD1 FRYL chr4 48619274 - DTD1 chr20 18744100 + Exonic hg38 BRCA TCGA-OL-A5D7-01A 5 88 In-Frame Inter-chr p11 p11.23 Seq+ 87733 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHRF1-GCGR PHRF1 chr11 609411 + GCGR chr17 81808823 + Exonic hg38 BRCA TCGA-OL-A5D7-01A 13 46 Out-of-frame Inter-chr p15.5 q25.3 Seq+ 87734 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK11-KDM4B STK11 chr19 1207203 + KDM4B chr19 5032866 + Exonic hg38 BRCA TCGA-OL-A5D7-01A 4 35 CDS-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 87735 ChimerSeq TCGA FAWG TCGA_RNA-Seq FIP1L1-SBNO2 FIP1L1 chr4 53425965 + SBNO2 chr19 1113704 - Exonic hg38 BRCA TCGA-OL-A5D7-01A 5 18 CDS-5'UTR Inter-chr q12 p13.3 Seq+ 87736 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLYCTK-ALAS1 GLYCTK chr3 52291111 + ALAS1 chr3 52211283 + Exonic hg38 BRCA TCGA-OL-A5D7-01A 3 16 In-Frame Intra-chr p21.2 p21.2 Seq+ 87737 ChimerSeq TCGA FAWG TCGA_RNA-Seq C8orf44-ADHFE1 C8orf44 chr8 66667701 + ADHFE1 chr8 66471430 + Exonic hg38 BRCA TCGA-OL-A5D7-01A 2 17 5'UTR-3'UTR Intra-chr q13.1 q13.1 87738 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM2-CHD4 TRIM2 chr4 153152612 + CHD4 chr12 6578917 - Exonic hg38 BRCA TCGA-OL-A5D7-01A 2 13 5'UTR-CDS Inter-chr q31.3 p13.31 Seq+ 87739 ChimerSeq TCGA FAWG TCGA_RNA-Seq GON4L-ARHGEF2 GON4L chr1 155820606 - ARHGEF2 chr1 155996627 - Exonic hg38 BRCA TCGA-OL-A5D7-01A 3 8 CDS-5'UTR Intra-chr q22 q22 Seq+ 87740 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3R3-LRRC41 PIK3R3 chr1 46061929 - LRRC41 chr1 46281385 - Exonic hg38 BRCA TCGA-OL-A5D7-01A 2 12 Out-of-frame Intra-chr p34.1 p33 Seq+ 87741 ChimerSeq TCGA FAWG TCGA_RNA-Seq POC1A-TLR9 POC1A chr3 52122379 - TLR9 chr3 52225635 - Exonic hg38 BRCA TCGA-OL-A5D7-01A 3 7 CDS-5'UTR Intra-chr p21.2 p21.2 Seq+ 87742 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUCO-ZCWPW2 SUCO chr1 172591071 + ZCWPW2 chr3 28435110 + Exonic hg38 BRCA TCGA-OL-A5D7-01A 2 8 Out-of-frame Inter-chr q24.3 p24.1 Seq+ 87743 ChimerSeq TCGA FAWG TCGA_RNA-Seq MUS81-C11orf80 MUS81 chr11 65865894 + C11orf80 chr11 66842849 + Exonic hg38 BRCA TCGA-OL-A5D7-01A 1 6 Out-of-frame Intra-chr q13.1 Tumor suppressor gene q13.2 87744 ChimerSeq TCGA FAWG TCGA_RNA-Seq C11orf80-EFEMP2 C11orf80 chr11 66828364 + EFEMP2 chr11 65870237 - Exonic hg38 BRCA TCGA-OL-A5D7-01A 1 1 Out-of-frame Intra-chr q13.2 q13.1 87745 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAL2-NOV MAL2 chr8 119221757 + NOV chr8 119416386 + Exonic hg38 BRCA TCGA-OL-A5D8-01A 18 65 Out-of-frame Intra-chr q24.12 q24.12 Tumor suppressor gene Seq+ 87746 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETDB1-CD46 SETDB1 chr1 150951481 + CD46 chr1 207757014 + Exonic hg38 BRCA TCGA-OL-A5D8-01A 12 34 Out-of-frame Intra-chr q21.3 Transcription factor q32.2 Seq+ 87747 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCNX2-SPRR1B PCNX2 chr1 233295326 - SPRR1B chr1 153032327 + Exonic hg38 BRCA TCGA-OL-A5D8-01A 1 72 CDS-5'UTR Intra-chr q42.2 q21.3 87748 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID4B-MRPS10P1 ARID4B chr1 235326914 - MRPS10P1 chr1 169990084 + Exonic hg38 BRCA TCGA-OL-A5D8-01A 9 25 Out-of-frame Intra-chr q42.3 q24.2 87749 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRNAD1-ARNT RRNAD1 chr1 156729215 + ARNT chr1 150818030 - Exonic hg38 BRCA TCGA-OL-A5D8-01A 4 35 Out-of-frame Intra-chr q23.1 q21.3 Oncogene Transcription factor Seq+ 87750 ChimerSeq TCGA FAWG TCGA_RNA-Seq NBPF10-NME7 NBPF10 chr1 146117547 - NME7 chr1 169132817 - Exonic hg38 BRCA TCGA-OL-A5D8-01A 10 5 Out-of-frame Intra-chr q21.1 q24.2 87751 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBCE-AIM2 TBCE chr1 235380149 + AIM2 chr1 159132356 - Exonic hg38 BRCA TCGA-OL-A5D8-01A 2 15 3'UTR-5'UTR Intra-chr q23.2 Tumor suppressor gene Seq+ 87752 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNC1I2-BRE DYNC1I2 chr2 171715443 + BRE chr2 28237202 + Exonic hg38 BRCA TCGA-OL-A5D8-01A 3 9 Out-of-frame Intra-chr q31.1 Seq+ 87753 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2AK2-STRN EIF2AK2 chr2 37114731 - STRN chr2 36925208 - Exonic hg38 BRCA TCGA-OL-A5D8-01A 2 12 In-Frame Intra-chr p22.2 p22.2 Seq+ 87754 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPD-TBX2 CPD chr17 30420983 + TBX2 chr17 61408054 + Exonic hg38 BRCA TCGA-OL-A5D8-01A 1 10 In-Frame Intra-chr q11.2 Tumor suppressor gene q23.2 Transcription factor Seq+ 87755 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFA8-DNAJC25 NDUFA8 chr9 122159627 - DNAJC25 chr9 111642857 + Exonic hg38 BRCA TCGA-OL-A5DA-01A 5 30 CDS-5'UTR Intra-chr q33.2 q31.3 Seq+ 87756 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB24-CMAHP ZBTB24 chr6 109475399 - CMAHP chr6 25081879 - Exonic hg38 BRCA TCGA-OL-A5DA-01A 3 28 CDS-3'UTR Intra-chr q21 Transcription factor p22.3 Seq+ 87757 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRIK2-CDKAL1 GRIK2 chr6 101399392 + CDKAL1 chr6 21065048 + Exonic hg38 BRCA TCGA-OL-A5DA-01A 2 7 Out-of-frame Intra-chr q16.3 p22.3 Seq+ 87758 ChimerSeq TCGA FAWG TCGA_RNA-Seq PREP-ARMC2 PREP chr6 105282451 - ARMC2 chr6 108894467 + Exonic hg38 BRCA TCGA-OL-A5DA-01A 1 8 Out-of-frame Intra-chr q21 q21 87759 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC180-NDUFA8 CCDC180 chr9 97313345 + NDUFA8 chr9 122152408 - Exonic hg38 BRCA TCGA-OL-A5DA-01A 1 6 In-Frame Intra-chr q22.33 q33.2 87760 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF773-PPP2R1A ZNF773 chr19 57500113 + PPP2R1A chr19 52201944 + Exonic hg38 BRCA TCGA-OL-A5RV-01A 4 12 In-Frame Intra-chr q13.43 Transcription factor q13.41 Oncogene Seq+ 87761 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA1-GOLGB1 NCOA1 chr2 24673463 + GOLGB1 chr3 121669355 - Exonic hg38 BRCA TCGA-OL-A5RW-01A 30 83 In-Frame Inter-chr p23.3 Oncogene Transcription factor q13.33 Seq+ 87762 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARMC9-TM4SF4 ARMC9 chr2 231296253 + TM4SF4 chr3 149498820 + Exonic hg38 BRCA TCGA-OL-A5RW-01A 8 39 Out-of-frame Inter-chr q37.1 q25.1 Seq+ 87763 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13L-GTF2IRD1 MED13L chr12 116111428 - GTF2IRD1 chr7 74508075 + Exonic hg38 BRCA TCGA-OL-A5RW-01A 1 21 CDS-5'UTR Inter-chr q24.21 q11.23 Transcription factor Seq+ 87764 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM98B-RASGRP1 FAM98B chr15 38481459 + RASGRP1 chr15 38505920 - Exonic hg38 BRCA TCGA-OL-A5RW-01A 1 11 In-Frame Intra-chr q14 q14 Seq+ 87765 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL18-RNF216 FBXL18 chr7 5491231 - RNF216 chr7 5641376 - Exonic hg38 BRCA TCGA-OL-A5RW-01A 2 4 In-Frame Intra-chr p22.1 p22.1 KB Seq+ 87766 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALK2-MAPK6 GALK2 chr15 49170375 + MAPK6 chr15 52058633 + Exonic hg38 BRCA TCGA-OL-A5RW-01A 2 2 Out-of-frame Intra-chr q21.1 q21.2 Seq+ 87767 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASL-GUSB ASL chr7 66076093 + GUSB chr7 65967907 - Exonic hg38 BRCA TCGA-OL-A5RW-01A 2 1 In-Frame Intra-chr q11.21 q11.21 Seq+ 87768 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAF3-KLC1 TRAF3 chr14 102830472 + KLC1 chr14 103654564 + Exonic hg38 BRCA TCGA-OL-A5RW-01A 1 3 5'UTR-5'UTR Intra-chr q32.32 q32.33 87769 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS53-RTN4RL1 VPS53 chr17 697418 - RTN4RL1 chr17 1937808 - Exonic hg38 BRCA TCGA-OL-A5RW-01A 1 3 5'UTR-CDS Intra-chr Tumor suppressor gene p13.3 Seq+ 87770 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-ZAN ERBB2 chr17 39710481 + ZAN chr7 100795196 + Exonic hg38 BRCA TCGA-OL-A5RY-01A 3 56 In-Frame Inter-chr q12 Oncogene q22.1 Seq+ 87771 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACO1-TYRP1 ACO1 chr9 32384735 + TYRP1 chr9 12693912 + Exonic hg38 BRCA TCGA-OL-A5RY-01A 8 12 5'UTR-5'UTR Intra-chr p21.1 p23 Seq+ 87772 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEKT4P2-IKZF3 TEKT4P2 chr21 9127489 - IKZF3 chr17 39757965 - Exonic hg38 BRCA TCGA-OL-A5RY-01A 3 18 3'UTR-3'UTR Inter-chr p11.2 q21.1 Tumor suppressor gene Transcription factor 87773 ChimerSeq TCGA FAWG TCGA_RNA-Seq FLRT3-SEL1L2 FLRT3 chr20 14337404 - SEL1L2 chr20 13956131 - Exonic hg38 BRCA TCGA-OL-A5RY-01A 1 9 5'UTR-5'UTR Intra-chr p12.1 p12.1 87774 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB22A-NEUROD2 RAB22A chr20 58311122 + NEUROD2 chr17 39608065 - Exonic hg38 BRCA TCGA-OL-A5RZ-01A 82 304 CDS-5'UTR Inter-chr q13.32 q12 Transcription factor Seq+ 87775 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCMH1-GPBP1L1 SCMH1 chr1 41242059 - GPBP1L1 chr1 45634236 - Exonic hg38 BRCA TCGA-OL-A5RZ-01A 22 54 5'UTR-CDS Intra-chr p34.2 Transcription factor p34.1 Transcription factor Seq+ 87776 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRDX1-TMEM53 PRDX1 chr1 45518938 - TMEM53 chr1 44645464 - Exonic hg38 BRCA TCGA-OL-A5RZ-01A 9 55 CDS-3'UTR Intra-chr p34.1 p34.1 Seq+ 87777 ChimerSeq TCGA FAWG TCGA_RNA-Seq HYI-NFIA HYI chr1 43451648 - NFIA chr1 61332512 + Exonic hg38 BRCA TCGA-OL-A5RZ-01A 16 17 In-Frame Intra-chr p34.2 p31.3 Transcription factor Seq+ 87778 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAG5-SLC47A1 SPAG5 chr17 28585864 - SLC47A1 chr17 19542393 + Exonic hg38 BRCA TCGA-OL-A5RZ-01A 6 49 In-Frame Intra-chr q11.2 p11.2 Seq+ 87779 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1E-SPAG5 PPM1E chr17 58965893 + SPAG5 chr17 28586182 - Exonic hg38 BRCA TCGA-OL-A5RZ-01A 6 39 In-Frame Intra-chr q22 q11.2 Seq+ 87780 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOM1L1-TMEM11 TOM1L1 chr17 54950126 + TMEM11 chr17 21198840 - Exonic hg38 BRCA TCGA-OL-A5RZ-01A 6 27 In-Frame Intra-chr q22 p11.2 Seq+ 87781 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIVEP3-GPBP1L1 HIVEP3 chr1 41864578 - GPBP1L1 chr1 45634236 - Exonic hg38 BRCA TCGA-OL-A5RZ-01A 6 14 5'UTR-CDS Intra-chr p34.2 Tumor suppressor gene Transcription factor p34.1 Transcription factor Seq+ 87782 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC144A-PPM1E CCDC144A chr17 16735643 + PPM1E chr17 58955649 + Exonic hg38 BRCA TCGA-OL-A5RZ-01A 3 22 Out-of-frame Intra-chr p11.2 q22 Seq+ 87783 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRF-HIVEP3 PTPRF chr1 43538277 + HIVEP3 chr1 41700995 - Exonic hg38 BRCA TCGA-OL-A5RZ-01A 5 9 5'UTR-5'UTR Intra-chr p34.2 p34.2 Tumor suppressor gene Transcription factor Seq+ 87784 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED1-LMNTD1 MED1 chr17 39443550 - LMNTD1 chr12 25526955 - Exonic hg38 BRCA TCGA-OL-A5RZ-01A 1 24 Out-of-frame Inter-chr q12 Tumor suppressor gene p12.1 Tumor suppressor gene 87785 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETNK1-RCAN2 ETNK1 chr12 22625586 + RCAN2 chr6 46248896 - Exonic hg38 BRCA TCGA-OL-A5RZ-01A 1 20 In-Frame Inter-chr p12.1 p12.3 Seq+ 87786 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACF1-PATJ MACF1 chr1 39105717 + PATJ chr1 62148284 + Exonic hg38 BRCA TCGA-OL-A5RZ-01A 1 15 Out-of-frame Intra-chr p34.3 p31.3 87787 ChimerSeq TCGA FAWG TCGA_RNA-Seq HELZ-TTYH2 HELZ chr17 67178659 - TTYH2 chr17 74252234 + Exonic hg38 BRCA TCGA-OL-A5RZ-01A 1 9 Out-of-frame Intra-chr q24.2 q25.1 Seq+ 87788 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2CD5-LGALS9B C2CD5 chr12 22523426 - LGALS9B chr17 20453607 - Exonic hg38 BRCA TCGA-OL-A5RZ-01A 1 6 Out-of-frame Inter-chr p12.1 p11.2 87789 ChimerSeq TCGA FAWG TCGA_RNA-Seq PATJ-SRR PATJ chr1 61990364 + SRR chr17 2315557 + Exonic hg38 BRCA TCGA-OL-A5RZ-01A 1 6 CDS-5'UTR Inter-chr p31.3 p13.3 87790 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITFG2-ZNF831 ITFG2 chr12 2824013 + ZNF831 chr20 59146231 + Exonic hg38 BRCA TCGA-OL-A5RZ-01A 1 5 Out-of-frame Inter-chr p13.33 q13.32 Transcription factor 87791 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD3-CACNA1C STARD3 chr17 39637231 + CACNA1C chr12 2448976 + Exonic hg38 BRCA TCGA-OL-A5RZ-01A 1 4 5'UTR-3'UTR Inter-chr q12 p13.33 87792 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-SOX5 FBXL20 chr17 39258305 - SOX5 chr12 23546424 - Exonic hg38 BRCA TCGA-OL-A5RZ-01A 1000 1000 3'UTR-CDS Inter-chr q12 p12.1 Transcription factor 87793 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D4-COMMD6 TBC1D4 chr13 75481270 - COMMD6 chr13 75530266 - Exonic hg38 BRCA TCGA-OL-A5S0-01A 9 65 In-Frame Intra-chr q22.2 q22.2 Seq+ 87794 ChimerSeq TCGA FAWG TCGA_RNA-Seq MNAT1-PCNX4 MNAT1 chr14 60798160 + PCNX4 chr14 60133970 + Exonic hg38 BRCA TCGA-OL-A5S0-01A 2 5 Out-of-frame Intra-chr q23.1 q23.1 87795 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2J2-ACAP3 UBE2J2 chr1 1267862 - ACAP3 chr1 1294199 - Exonic hg38 BRCA TCGA-OL-A66I-01A 30 191 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 87796 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASCC1-MICU1 ASCC1 chr10 72196811 - MICU1 chr10 72423371 - Exonic hg38 BRCA TCGA-OL-A66I-01A 14 36 In-Frame Intra-chr q22.1 q22.1 Seq+ 87797 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED25-MAPK15 MED25 chr19 49832415 + MAPK15 chr8 143717694 + Exonic hg38 BRCA TCGA-OL-A66I-01A 7 22 CDS-3'UTR Inter-chr q13.33 Seq+ 87798 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAH-NINJ2 PAH chr12 102912791 - NINJ2 chr12 566178 - Exonic hg38 BRCA TCGA-OL-A66I-01A 2 28 In-Frame Intra-chr q23.2 p13.33 Seq+ 87799 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLGA4-CTDSPL GOLGA4 chr3 37273601 + CTDSPL chr3 37964571 + Exonic hg38 BRCA TCGA-OL-A66I-01A 4 18 In-Frame Intra-chr p22.2 p22.2 Tumor suppressor gene Seq+ 87800 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOT1L-EPB41L2 DOT1L chr19 2180756 + EPB41L2 chr6 130956499 - Exonic hg38 BRCA TCGA-OL-A66I-01A 4 17 CDS-5'UTR Inter-chr p13.3 Oncogene Transcription factor q23.2 Seq+ 87801 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK11-SMARCD2 STK11 chr19 1207203 + SMARCD2 chr17 63837625 - Exonic hg38 BRCA TCGA-OL-A66I-01A 2 11 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene q23.3 Seq+ 87802 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRPPRC-CYTIP LRPPRC chr2 43934190 - CYTIP chr2 157444006 - Exonic hg38 BRCA TCGA-OL-A66I-01A 3 6 In-Frame Intra-chr p21 q24.1 Seq+ 87803 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM259-CCDC25 TMEM259 chr19 1020772 - CCDC25 chr8 27752587 - Exonic hg38 BRCA TCGA-OL-A66I-01A 1 14 In-Frame Inter-chr p13.3 p21.1 87804 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOX-PGBD2 TOX chr8 58939302 - PGBD2 chr1 248913816 + Exonic hg38 BRCA TCGA-OL-A66I-01A 2 6 CDS-5'UTR Inter-chr q12.1 q44 Seq+ 87805 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO32-ANXA13 FBXO32 chr8 123531898 - ANXA13 chr8 123681359 - Exonic hg38 BRCA TCGA-OL-A66I-01A 2 5 In-Frame Intra-chr q24.13 Tumor suppressor gene q24.13 Seq+ 87806 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREBBP-ZNF500 CREBBP chr16 3879832 - ZNF500 chr16 4753058 - Exonic hg38 BRCA TCGA-OL-A66I-01A 2 4 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Transcription factor Seq+ 87807 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUCKS1-PM20D1 NUCKS1 chr1 205749957 - PM20D1 chr1 205847971 - Exonic hg38 BRCA TCGA-OL-A66I-01A 1 6 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 87808 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP7-TMEM186 USP7 chr16 8905187 - TMEM186 chr16 8781444 - Exonic hg38 BRCA TCGA-OL-A66I-01A 1 4 3'UTR-3'UTR Intra-chr p13.2 p13.2 87809 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABAT-USP7 ABAT chr16 8784280 + USP7 chr16 8915526 - Exonic hg38 BRCA TCGA-OL-A66I-01A 1000 1000 Out-of-frame Intra-chr p13.2 p13.2 87810 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD3-PLEKHA2 NSD3 chr8 38288487 - PLEKHA2 chr8 38969421 + Exonic hg38 BRCA TCGA-OL-A66J-01A 4 6 In-Frame Intra-chr p11.23 Tumor suppressor gene p11.22 87811 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLPB-TMEM134 CLPB chr11 72430312 - TMEM134 chr11 67468092 - Exonic hg38 BRCA TCGA-OL-A66J-01A 2 5 In-Frame Intra-chr q13.4 q13.2 Seq+ 87812 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOM1L2-PEMT TOM1L2 chr17 17893661 - PEMT chr17 17577027 - Exonic hg38 BRCA TCGA-OL-A66O-01A 3 13 In-Frame Intra-chr p11.2 Tumor suppressor gene p11.2 Seq+ 87813 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF7-ATP5G2 ATF7 chr12 53600953 - ATP5G2 chr12 53669948 - Exonic hg38 BRCA TCGA-OL-A66P-01A 35 183 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 Seq+ 87814 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM135-CHEK1 TMEM135 chr11 87091395 + CHEK1 chr11 125675928 + Exonic hg38 BRCA TCGA-OL-A66P-01A 14 86 CDS-3'UTR Intra-chr q14.2 q24.2 Oncogene Tumor suppressor gene Seq+ 87815 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCM2-SUGCT CCM2 chr7 45000363 + SUGCT chr7 40860316 + Exonic hg38 BRCA TCGA-OL-A66P-01A 5 22 Out-of-frame Intra-chr p13 p14.1 87816 ChimerSeq TCGA FAWG TCGA_RNA-Seq KHDC1-OOEP KHDC1 chr6 73262934 - OOEP chr6 73369385 - Exonic hg38 BRCA TCGA-OL-A66P-01A 2 13 5'UTR-CDS Intra-chr q13 q13 Seq+ 87817 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAF2-CCDC183 TRAF2 chr9 136909994 + CCDC183 chr9 136799102 + Exonic hg38 BRCA TCGA-OL-A66P-01A 4 3 Out-of-frame Intra-chr q34.3 Tumor suppressor gene q34.3 87818 ChimerSeq TCGA FAWG TCGA_RNA-Seq CXCL16-TEKT1 CXCL16 chr17 4738408 - TEKT1 chr17 6819358 - Exonic hg38 BRCA TCGA-OL-A66P-01A 2 5 In-Frame Intra-chr p13.2 p13.1 Seq+ 87819 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAA40-RTN3 NAA40 chr11 63947003 + RTN3 chr11 63749991 + Exonic hg38 BRCA TCGA-OL-A66P-01A 2 4 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 87820 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFP30-PRX ZFP30 chr19 37654712 - PRX chr19 40408383 - Exonic hg38 BRCA TCGA-OL-A66P-01A 1 8 5'UTR-5'UTR Intra-chr q13.12 Transcription factor q13.2 Seq+ 87821 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLGB1-IQCB1 GOLGB1 chr3 121681687 - IQCB1 chr3 121790215 - Exonic hg38 BRCA TCGA-OL-A66P-01A 1 5 In-Frame Intra-chr q13.33 q13.33 Seq+ 87822 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEF2K-VWA3A EEF2K chr16 22244730 + VWA3A chr16 22138360 + Exonic hg38 BRCA TCGA-OL-A66P-01A 1 4 5'UTR-5'UTR Intra-chr p12.2 Seq+ 87823 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBOAT1-FYN MBOAT1 chr6 20212136 - FYN chr6 111661947 - Exonic hg38 BRCA TCGA-OL-A6VO-01A 17 56 Out-of-frame Intra-chr p22.3 q21 TK:Src Seq+ 87824 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD2AP-BLOC1S5 CD2AP chr6 47554766 + BLOC1S5 chr6 8015828 - Exonic hg38 BRCA TCGA-OL-A6VO-01A 8 47 Out-of-frame Intra-chr p12.3 p24.3 Seq+ 87825 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMK1D-MINDY3 CAMK1D chr10 12666810 + MINDY3 chr10 15782226 - Exonic hg38 BRCA TCGA-OL-A6VO-01A 6 28 Out-of-frame Intra-chr p13 p13 87826 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSGIN2-RIPK2 OSGIN2 chr8 89914746 + RIPK2 chr8 89762829 + Exonic hg38 BRCA TCGA-OL-A6VO-01A 2 9 Out-of-frame Intra-chr q21.3 q21.3 TKL:RIPK Seq+ 87827 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMIM13-ENPP3 SMIM13 chr6 11094389 + ENPP3 chr6 131637235 + Exonic hg38 BRCA TCGA-OL-A6VO-01A 2 7 CDS-5'UTR Intra-chr p24.2 q23.2 87828 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENPP1-RIPPLY2 ENPP1 chr6 131808275 + RIPPLY2 chr6 83854097 + Exonic hg38 BRCA TCGA-OL-A6VO-01A 1 4 In-Frame Intra-chr q23.2 q14.2 Seq+ 87829 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAP31-SYNJ2BP BCAP31 chrX 153703959 - SYNJ2BP chr14 70375771 - Exonic hg38 BRCA TCGA-OL-A97C-01A 1 4 In-Frame Inter-chr q28 q24.2 87830 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTTN-INPPL1 CTTN chr11 70433801 + INPPL1 chr11 72232731 + Exonic hg38 BRCA TCGA-PE-A5DC-01A 21 107 Out-of-frame Intra-chr q13.3 q13.4 Seq+ 87831 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAPOLA-GALNT5 PAPOLA chr14 96502600 + GALNT5 chr2 157284282 + Exonic hg38 BRCA TCGA-PE-A5DC-01A 7 13 In-Frame Inter-chr q32.2 q24.1 Seq+ 87832 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP1-MATN2 AGAP1 chr2 235968623 + MATN2 chr8 97941777 + Exonic hg38 BRCA TCGA-PE-A5DC-01A 1 25 In-Frame Inter-chr q37.2 q22.1 Seq+ 87833 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHB1-PACS1 PLEKHB1 chr11 73651890 + PACS1 chr11 66193486 + Exonic hg38 BRCA TCGA-PE-A5DC-01A 4 7 In-Frame Intra-chr q13.4 q13.1 Seq+ 87834 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP5-ALKBH5 LRP5 chr11 68312805 + ALKBH5 chr17 18194955 + Exonic hg38 BRCA TCGA-PE-A5DC-01A 3 6 Out-of-frame Inter-chr q13.2 p11.2 Seq+ 87835 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO15A-TOP3A MYO15A chr17 18173921 + TOP3A chr17 18274980 - Exonic hg38 BRCA TCGA-PE-A5DC-01A 3 4 CDS-5'UTR Intra-chr p11.2 Seq+ 87836 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF286B-ALKBH5 ZNF286B chr17 18680741 - ALKBH5 chr17 18194955 + Exonic hg38 BRCA TCGA-PE-A5DC-01A 1 6 3'UTR-CDS Intra-chr p11.2 Transcription factor p11.2 Seq+ 87837 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L1-CEP250 EPB41L1 chr20 36198041 + CEP250 chr20 35458304 + Exonic hg38 BRCA TCGA-PE-A5DC-01A 1 5 CDS-5'UTR Intra-chr q11.23 q11.22 87838 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD8-IMPG1 CHD8 chr14 21426128 - IMPG1 chr6 76034787 - Exonic hg38 BRCA TCGA-PE-A5DD-01A 6 8 Out-of-frame Inter-chr q11.2 q14.1 Seq+ 87839 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIN3A-NEO1 SIN3A chr15 75451423 - NEO1 chr15 73236347 + Exonic hg38 BRCA TCGA-PE-A5DD-01A 1 11 5'UTR-CDS Intra-chr q24.2 q24.1 Seq+ 87840 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNAP29-IGLL1 SNAP29 chr22 20870533 + IGLL1 chr22 23575082 - Exonic hg38 BRCA TCGA-PE-A5DE-01A 28 221 In-Frame Intra-chr q11.21 q11.23 Seq+ 87841 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITPA-SLC22A24 ITPA chr20 3214058 + SLC22A24 chr11 63079997 - Exonic hg38 BRCA TCGA-PL-A8LX-01A 1 7 In-Frame Inter-chr p13 q12.3 Seq+ 87842 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFAF5-MACROD2 NDUFAF5 chr20 13808902 + MACROD2 chr20 15862745 + Exonic hg38 BRCA TCGA-PL-A8LX-01A 1 2 Out-of-frame Intra-chr p12.1 p12.1 87843 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP10-KIFC3 USP10 chr16 84733503 + KIFC3 chr16 57766985 - Exonic hg38 BRCA TCGA-PL-A8LZ-01A 16 59 In-Frame Intra-chr q24.1 q21 Seq+ 87844 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDC1-YIPF1 NDC1 chr1 53825798 - YIPF1 chr1 53860153 - Exonic hg38 BRCA TCGA-PL-A8LZ-01A 6 49 In-Frame Intra-chr p32.3 p32.3 Seq+ 87845 ChimerSeq TCGA FAWG TCGA_RNA-Seq GK5-CENPL GK5 chr3 142215599 - CENPL chr1 173811306 - Exonic hg38 BRCA TCGA-PL-A8LZ-01A 1 15 CDS-5'UTR Inter-chr q23 q25.1 Seq+ 87846 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3C2A-PLEKHA7 PIK3C2A chr11 17105169 - PLEKHA7 chr11 16871182 - Exonic hg38 BRCA TCGA-PL-A8LZ-01A 3 5 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 87847 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLA-HNRNPH2 GLA chrX 101407710 - HNRNPH2 chrX 101411936 + Exonic hg38 BRCA TCGA-S3-A6ZF-01A 59 207 CDS-5'UTR Intra-chr q22.1 q22.1 Seq+ 87848 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF44-NXF3 RNF44 chr5 176537731 - NXF3 chrX 103084495 - Exonic hg38 BRCA TCGA-S3-A6ZF-01A 14 45 5'UTR-CDS Inter-chr q35.2 q22.1 Seq+ 87849 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD99L2-CXorf66 CD99L2 chrX 150898522 - CXorf66 chrX 139958217 - Exonic hg38 BRCA TCGA-S3-A6ZF-01A 14 36 In-Frame Intra-chr q28 q27.1 Seq+ 87850 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPC4AP-TOX2 TRPC4AP chr20 35010187 - TOX2 chr20 44065712 + Exonic hg38 BRCA TCGA-S3-A6ZF-01A 2 32 Out-of-frame Intra-chr q11.22 q13.12 Seq+ 87851 ChimerSeq TCGA FAWG TCGA_RNA-Seq BLNK-PIK3AP1 BLNK chr10 96216653 - PIK3AP1 chr10 96628493 - Exonic hg38 BRCA TCGA-S3-A6ZF-01A 6 13 In-Frame Intra-chr q24.1 Oncogene Tumor suppressor gene q24.1 Seq+ 87852 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC149-GABRB1 CCDC149 chr4 24912817 - GABRB1 chr4 47031914 + Exonic hg38 BRCA TCGA-S3-A6ZF-01A 2 8 Out-of-frame Intra-chr p15.2 p12 Seq+ 87853 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYB5R4-CNTN6 CYB5R4 chr6 83864328 + CNTN6 chr3 1147927 + Exonic hg38 BRCA TCGA-S3-A6ZF-01A 1 11 CDS-5'UTR Inter-chr q14.2 p26.3 Seq+ 87854 ChimerSeq TCGA FAWG TCGA_RNA-Seq HHAT-RFWD2 HHAT chr1 210623670 + RFWD2 chr1 175947239 - Exonic hg38 BRCA TCGA-S3-A6ZG-01A 18 36 Out-of-frame Intra-chr q25.2 Tumor suppressor gene Seq+ 87855 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARRB1-PICALM ARRB1 chr11 75351588 - PICALM chr11 86014963 - Exonic hg38 BRCA TCGA-S3-A6ZG-01A 3 25 In-Frame Intra-chr q13.4 q14.2 Seq+ 87856 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD4-COPA PSMD4 chr1 151254808 + COPA chr1 160309176 - Exonic hg38 BRCA TCGA-S3-A6ZG-01A 2 8 Out-of-frame Intra-chr q21.3 q23.2 Seq+ 87857 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAP3-OBSCN DAP3 chr1 155689174 + OBSCN chr1 228332860 + Exonic hg38 BRCA TCGA-S3-A6ZG-01A 1 4 5'UTR-CDS Intra-chr q22 q42.13 87858 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB11FIP1-UNC5D RAB11FIP1 chr8 37877109 - UNC5D chr8 35790359 + Exonic hg38 BRCA TCGA-S3-A6ZH-01A 12 191 Out-of-frame Intra-chr p11.23 p12 Tumor suppressor gene Seq+ 87859 ChimerSeq TCGA FAWG TCGA_RNA-Seq PC-PPP6R3 PC chr11 66952430 - PPP6R3 chr11 68603342 + Exonic hg38 BRCA TCGA-S3-A6ZH-01A 21 142 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 87860 ChimerSeq TCGA FAWG TCGA_RNA-Seq PC-ANO1 PC chr11 66958322 - ANO1 chr11 70105734 + Exonic hg38 BRCA TCGA-S3-A6ZH-01A 7 23 5'UTR-5'UTR Intra-chr q13.2 q13.3 Seq+ 87861 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOOK3-FADS2P1 HOOK3 chr8 42906258 + FADS2P1 chr11 56900039 + Exonic hg38 BRCA TCGA-S3-A6ZH-01A 3 7 Out-of-frame Inter-chr p11.21 Oncogene q12.1 87862 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFAT5-NQO1 NFAT5 chr16 69568548 + NQO1 chr16 69718534 - Exonic hg38 BRCA TCGA-S3-A6ZH-01A 1 1 In-Frame Intra-chr q22.1 Transcription factor q22.1 87863 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOMO3-TFAP4 NOMO3 chr16 16256158 + TFAP4 chr16 4262701 - Exonic hg38 BRCA TCGA-S3-AA0Z-01A 45 218 3'UTR-CDS Intra-chr p13.11 p13.3 Transcription factor Seq+ 87864 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOOK2-NFIX HOOK2 chr19 12774669 - NFIX chr19 13025021 + Exonic hg38 BRCA TCGA-S3-AA0Z-01A 19 102 In-Frame Intra-chr p13.13 p13.13 Transcription factor Seq+ 87865 ChimerSeq TCGA FAWG TCGA_RNA-Seq EMP2-BFAR EMP2 chr16 10537928 - BFAR chr16 14661892 + Exonic hg38 BRCA TCGA-S3-AA0Z-01A 14 32 CDS-3'UTR Intra-chr p13.13 Tumor suppressor gene Seq+ 87866 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL7C-OTOA BCL7C chr16 30888860 - OTOA chr16 21691584 + Exonic hg38 BRCA TCGA-S3-AA0Z-01A 8 30 CDS-3'UTR Intra-chr p11.2 p12.2 Seq+ 87867 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPRC5B-C16orf96 GPRC5B chr16 19861837 - C16orf96 chr16 4571561 + Exonic hg38 BRCA TCGA-S3-AA0Z-01A 5 21 In-Frame Intra-chr p12.3 p13.3 Seq+ 87868 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRR14-GSG1L PRR14 chr16 30655593 + GSG1L chr16 27963203 - Exonic hg38 BRCA TCGA-S3-AA0Z-01A 1 8 Out-of-frame Intra-chr p11.2 p12.1 Seq+ 87869 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLEC16A-GRIN2A CLEC16A chr16 11061022 + GRIN2A chr16 9938551 - Exonic hg38 BRCA TCGA-S3-AA0Z-01A 2 3 Out-of-frame Intra-chr p13.13 p13.2 Tumor suppressor gene Seq+ 87870 ChimerSeq TCGA FAWG TCGA_RNA-Seq AEBP2-TACC1P1 AEBP2 chr12 19440727 + TACC1P1 chr10 37523011 + Exonic hg38 BRCA TCGA-S3-AA10-01A 2 5 Out-of-frame Inter-chr p12.3 Transcription factor p11.21 Seq+ 87871 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXK1-ZNF671 FOXK1 chr7 4682868 + ZNF671 chr19 57723340 - Exonic hg38 BRCA TCGA-S3-AA10-01A 2 5 Out-of-frame Inter-chr p22.1 Transcription factor q13.43 Transcription factor Seq+ 87872 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX8-TDRD3 DHX8 chr17 43522226 + TDRD3 chr13 60494435 + Exonic hg38 BRCA TCGA-S3-AA10-01A 2 3 Out-of-frame Inter-chr q21.31 q21.2 87873 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF124-AHCTF1 ZNF124 chr1 247159006 - AHCTF1 chr1 246918377 - Exonic hg38 BRCA TCGA-S3-AA10-01A 1 3 In-Frame Intra-chr q44 Transcription factor q44 Transcription factor Seq+ 87874 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC31B-GRID1 SEC31B chr10 100505361 - GRID1 chr10 85647397 - Exonic hg38 BRCA TCGA-S3-AA11-01A 1 11 Out-of-frame Intra-chr q24.31 q23.2 Seq+ 87875 ChimerSeq TCGA FAWG TCGA_RNA-Seq CABLES1-FTO CABLES1 chr18 23136607 + FTO chr16 54111762 + Exonic hg38 BRCA TCGA-S3-AA12-01A 94 203 In-Frame Inter-chr q11.2 Tumor suppressor gene q12.2 Seq+ 87876 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2E2-EIF4EBP1 GTF2E2 chr8 30653433 - EIF4EBP1 chr8 38057081 + Exonic hg38 BRCA TCGA-S3-AA12-01A 29 66 In-Frame Intra-chr p12 p11.23 Seq+ 87877 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC20A2-ZMAT4 SLC20A2 chr8 42541538 - ZMAT4 chr8 40767730 - Exonic hg38 BRCA TCGA-S3-AA12-01A 3 5 5'UTR-CDS Intra-chr p11.21 p11.21 Transcription factor Seq+ 87878 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2E2-FUT10 GTF2E2 chr8 30653433 - FUT10 chr8 33394255 - Exonic hg38 BRCA TCGA-S3-AA12-01A 1 8 Out-of-frame Intra-chr p12 p12 Seq+ 87879 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPEPPS-OMG NPEPPS chr17 47569494 + OMG chr17 31272765 - Exonic hg38 BRCA TCGA-S3-AA14-01A 1 42 CDS-3'UTR Intra-chr q21.32 q11.2 87880 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRMT11-TPD52L1 TRMT11 chr6 125986622 + TPD52L1 chr6 125220078 + Exonic hg38 BRCA TCGA-S3-AA15-01A 4 23 Out-of-frame Intra-chr q22.32 q22.31 Seq+ 87881 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDLRAD3-KLKP1 LDLRAD3 chr11 36098461 + KLKP1 chr19 50887874 - Exonic hg38 BRCA TCGA-S3-AA17-01A 3 8 CDS-3'UTR Inter-chr p13 q13.33 Seq+ 87882 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCP11L1-SYT9 TCP11L1 chr11 33072653 + SYT9 chr11 7303039 + Exonic hg38 BRCA TCGA-S3-AA17-01A 3 5 Out-of-frame Intra-chr p13 p15.4 Seq+ 87883 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJB12-CTNNA3 DNAJB12 chr10 72354765 - CTNNA3 chr10 67219870 - Exonic hg38 BRCA TCGA-S3-AA17-01A 1 6 Out-of-frame Intra-chr q22.1 q21.3 Tumor suppressor gene Seq+ 87884 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF701-PSMA7 ZNF701 chr19 52570330 + PSMA7 chr20 62140944 - Exonic hg38 BRCA TCGA-UL-AAZ6-01A 50 9 5'UTR-CDS Inter-chr q13.41 Transcription factor q13.33 Seq+ 87885 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNB1-TANC2 CACNB1 chr17 39191474 - TANC2 chr17 63073943 + Exonic hg38 BRCA TCGA-UL-AAZ6-01A 16 31 Out-of-frame Intra-chr q12 q23.2 Seq+ 87886 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNHG14-STARD3 SNHG14 chr15 25252333 + STARD3 chr17 39660211 + Exonic hg38 BRCA TCGA-UL-AAZ6-01A 13 24 5'UTR-CDS Inter-chr q11.2 q12 87887 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD8-MAP3K10 PSMD8 chr19 38376454 + MAP3K10 chr19 40204485 + Exonic hg38 BRCA TCGA-UL-AAZ6-01A 6 12 In-Frame Intra-chr q13.2 q13.2 Seq+ 87888 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCZ-GABRD PRKCZ chr1 2059591 + GABRD chr1 2024942 + Exonic hg38 BRCA TCGA-UL-AAZ6-01A 6 11 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 87889 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYFIP1-ACACA CYFIP1 chr15 22937104 - ACACA chr17 37277114 - Exonic hg38 BRCA TCGA-UL-AAZ6-01A 6 7 5'UTR-5'UTR Inter-chr q11.2 Seq+ 87890 ChimerSeq TCGA FAWG TCGA_RNA-Seq APPBP2-ZNF345 APPBP2 chr17 60479148 - ZNF345 chr19 36892818 + Exonic hg38 BRCA TCGA-UL-AAZ6-01A 3 12 CDS-5'UTR Inter-chr q23.2 q13.12 Transcription factor Seq+ 87891 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT5B-SUPT5H KMT5B chr11 68213477 - SUPT5H chr19 39464798 + Exonic hg38 BRCA TCGA-UL-AAZ6-01A 4 8 5'UTR-CDS Inter-chr q13.2 q13.2 87892 ChimerSeq TCGA FAWG TCGA_RNA-Seq LENG8-SIPA1L3 LENG8 chr19 54458521 + SIPA1L3 chr19 38141184 + Exonic hg38 BRCA TCGA-UL-AAZ6-01A 4 7 3'UTR-CDS Intra-chr q13.13 Seq+ 87893 ChimerSeq TCGA FAWG TCGA_RNA-Seq DUSP14-HEATR6 DUSP14 chr17 37489952 + HEATR6 chr17 60044135 - Exonic hg38 BRCA TCGA-UL-AAZ6-01A 3 9 Out-of-frame Intra-chr q12 q23.1 Seq+ 87894 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-EYA2 BCAS3 chr17 61040892 + EYA2 chr20 47016181 + Exonic hg38 BRCA TCGA-UL-AAZ6-01A 1 16 In-Frame Inter-chr q23.2 q13.12 87895 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K10-PCMTD2 MAP3K10 chr19 40198555 + PCMTD2 chr20 64273221 + Exonic hg38 BRCA TCGA-UL-AAZ6-01A 2 10 CDS-3'UTR Inter-chr q13.2 Seq+ 87896 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED8-SCMH1 MED8 chr1 43385046 - SCMH1 chr1 41028726 - Exonic hg38 BRCA TCGA-UL-AAZ6-01A 1 10 Out-of-frame Intra-chr p34.2 p34.2 Transcription factor Seq+ 87897 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS2-ACACA INTS2 chr17 61919400 - ACACA chr17 37369487 - Exonic hg38 BRCA TCGA-UL-AAZ6-01A 2 4 CDS-5'UTR Intra-chr q23.2 Seq+ 87898 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-SNHG14 FBXL20 chr17 39402173 - SNHG14 chr15 25222159 + Exonic hg38 BRCA TCGA-UL-AAZ6-01A 1 3 CDS-5'UTR Inter-chr q12 q11.2 87899 ChimerSeq TCGA FAWG TCGA_RNA-Seq TESMIN-COX18 TESMIN chr11 68738700 - COX18 chr4 73065413 - Exonic hg38 BRCA TCGA-UL-AAZ6-01A 1 3 In-Frame Inter-chr q13.3 q13.3 87900 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM214A-CTPS1 FAM214A chr15 52678006 - CTPS1 chr1 40983278 + Exonic hg38 BRCA TCGA-UL-AAZ6-01A 1 2 CDS-5'UTR Inter-chr q21.3 p34.2 87901 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC2-MED13 TANC2 chr17 63319090 + MED13 chr17 62035608 - Exonic hg38 BRCA TCGA-UL-AAZ6-01A 1 2 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 87902 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFAND1-STAU2 ZFAND1 chr8 81732199 - STAU2 chr8 73422702 - Exonic hg38 BRCA TCGA-UU-A93S-01A 8 19 5'UTR-CDS Intra-chr q21.13 q21.11 Seq+ 87903 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM2-TGIF1 DNM2 chr19 10759811 + TGIF1 chr18 3418143 + Exonic hg38 BRCA TCGA-UU-A93S-01A 2 13 CDS-5'UTR Inter-chr p13.2 p11.31 Transcription factor Seq+ 87904 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2K-LIAS UBE2K chr4 39698390 + LIAS chr4 39460790 + Exonic hg38 BRCA TCGA-UU-A93S-01A 2 13 In-Frame Intra-chr p14 p14 Seq+ 87905 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM37-C17orf67 TRIM37 chr17 59041813 - C17orf67 chr17 56825321 - Exonic hg38 BRCA TCGA-UU-A93S-01A 2 9 CDS-5'UTR Intra-chr q22 q22 Seq+ 87906 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBGCP4-TMEM62 TUBGCP4 chr15 43386330 + TMEM62 chr15 43178607 + Exonic hg38 BRCA TCGA-UU-A93S-01A 2 7 Out-of-frame Intra-chr q15.3 q15.2 Seq+ 87907 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM2-ILF3 DNM2 chr19 10718403 + ILF3 chr19 10677163 + Exonic hg38 BRCA TCGA-UU-A93S-01A 1 7 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 87908 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-PPP1R1B ERBB2 chr17 39715939 + PPP1R1B chr17 39633883 + Exonic hg38 BRCA TCGA-UU-A93S-01A 1 3 In-Frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 87909 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF2-EIF3D NF2 chr22 29604112 + EIF3D chr22 36512602 - Exonic hg38 BRCA TCGA-V7-A7HQ-01A 3 9 In-Frame Intra-chr q12.2 Oncogene Tumor suppressor gene q12.3 Seq+ 87910 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAM9-PROSC ADAM9 chr8 39007983 + PROSC chr8 37765526 + Exonic hg38 BRCA TCGA-WT-AB41-01A 6 17 Out-of-frame Intra-chr Seq+ 87911 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK1-SHANK2 PAK1 chr11 77473552 - SHANK2 chr11 70661678 - Exonic hg38 BRCA TCGA-XX-A899-01A 30 82 5'UTR-CDS Intra-chr q14.1 STE:STE20 q13.4 Seq+ 87912 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK1-CWF19L2 PAK1 chr11 77473552 - CWF19L2 chr11 107455776 - Exonic hg38 BRCA TCGA-XX-A899-01A 12 24 5'UTR-CDS Intra-chr q14.1 STE:STE20 q22.3 Seq+ 87913 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSF1-ADAM2 RSF1 chr11 77747036 - ADAM2 chr8 39749744 - Exonic hg38 BRCA TCGA-XX-A899-01A 6 33 CDS-5'UTR Inter-chr q14.1 Seq+ 87914 ChimerSeq TCGA FAWG TCGA_RNA-Seq EMSY-SHANK2 EMSY chr11 76526635 + SHANK2 chr11 70661678 - Exonic hg38 BRCA TCGA-XX-A899-01A 5 25 Out-of-frame Intra-chr q13.5 q13.4 87915 ChimerSeq TCGA FAWG TCGA_RNA-Seq XRRA1-GUCY1A2 XRRA1 chr11 74945018 - GUCY1A2 chr11 106776582 - Exonic hg38 BRCA TCGA-XX-A899-01A 3 24 5'UTR-CDS Intra-chr q13.4 q22.3 Oncogene Seq+ 87916 ChimerSeq TCGA FAWG TCGA_RNA-Seq COMMD10-CHSY3 COMMD10 chr5 116134178 + CHSY3 chr5 130184229 + Exonic hg38 BRCA TCGA-XX-A899-01A 2 3 In-Frame Intra-chr q23.1 q23.3 Seq+ 87917 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOOK3-C2CD3 HOOK3 chr8 43010405 + C2CD3 chr11 74054671 - Exonic hg38 BRCA TCGA-XX-A899-01A 1 3 Out-of-frame Inter-chr p11.21 Oncogene q13.4 87918 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIT1-CHI3L2 TRIT1 chr1 39883318 - CHI3L2 chr1 111229852 + Exonic hg38 BRCA TCGA-XX-A89A-01A 23 143 Out-of-frame Intra-chr p34.2 Tumor suppressor gene p13.2 Seq+ 87919 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-MYEOV SHANK2 chr11 70798443 - MYEOV chr11 69341510 + Exonic hg38 BRCA TCGA-XX-A89A-01A 21 97 CDS-3'UTR Intra-chr q13.4 q13.3 87920 ChimerSeq TCGA FAWG TCGA_RNA-Seq ILF3-DENND2D ILF3 chr19 10677310 + DENND2D chr1 111196056 - Exonic hg38 BRCA TCGA-XX-A89A-01A 4 8 Out-of-frame Inter-chr p13.2 p13.2 Tumor suppressor gene Seq+ 87921 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGM2L1-PPME1 PGM2L1 chr11 74398051 - PPME1 chr11 74250954 + Exonic hg38 BRCA TCGA-Z7-A8R6-01A 10 44 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 87922 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRD7-ZNF423 BRD7 chr16 50354425 - ZNF423 chr16 49525494 - Exonic hg38 BRCA TCGA-Z7-A8R6-01A 5 21 Out-of-frame Intra-chr q12.1 Tumor suppressor gene q12.1 Transcription factor Seq+ 87923 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF3-FAM208A ARHGEF3 chr3 56958823 - FAM208A chr3 56673725 - Exonic hg38 BRCA TCGA-Z7-A8R6-01A 1 7 Out-of-frame Intra-chr p14.3 p14.3 87924 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUNDC1-RGS9 RUNDC1 chr17 42990436 + RGS9 chr17 65227275 + Exonic hg38 CESC TCGA-4J-AA1J-01A 10 30 Out-of-frame Intra-chr q21.31 q24.1 Seq+ 87925 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTGES3L-RGS9 PTGES3L chr17 42979170 - RGS9 chr17 65210488 + Exonic hg38 CESC TCGA-4J-AA1J-01A 4 16 Out-of-frame Intra-chr q21.31 q24.1 Seq+ 87926 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC27-C17orf53 CDC27 chr17 47141853 - C17orf53 chr17 44154556 + Exonic hg38 CESC TCGA-4J-AA1J-01A 3 1 In-Frame Intra-chr q21.32 q21.31 Seq+ 87927 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-PPP1R1B ERBB2 chr17 39700311 + PPP1R1B chr17 39633883 + Exonic hg38 CESC TCGA-4J-AA1J-01A 1 1 In-Frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 87928 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1D-C17orf64 PPM1D chr17 60600886 + C17orf64 chr17 60429362 + Exonic hg38 CESC TCGA-BI-A0VR-01A 1 6 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 87929 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNNA1-AP3B1 CTNNA1 chr5 138887642 + AP3B1 chr5 78181662 - Exonic hg38 CESC TCGA-BI-A0VR-01A 1 1 In-Frame Intra-chr q31.2 Oncogene q14.1 87930 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASSF8-ETNK1 RASSF8 chr12 25995130 + ETNK1 chr12 22643763 + Exonic hg38 CESC TCGA-BI-A0VS-01A 8 83 5'UTR-CDS Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 87931 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM9SF4-PLAGL2 TM9SF4 chr20 32161365 + PLAGL2 chr20 32202292 - Exonic hg38 CESC TCGA-BI-A0VS-01A 2 6 CDS-5'UTR Intra-chr q11.21 q11.21 Transcription factor Seq+ 87932 ChimerSeq TCGA FAWG TCGA_RNA-Seq JARID2-MDGA1 JARID2 chr6 15246584 + MDGA1 chr6 37664106 - Exonic hg38 CESC TCGA-C5-A1BJ-01A 1 2 Out-of-frame Intra-chr p22.3 p21.2 87933 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAG1-IL20RB STAG1 chr3 136363366 - IL20RB chr3 137010113 + Exonic hg38 CESC TCGA-C5-A1BL-01A 1 1 In-Frame Intra-chr q22.3 q22.3 Seq+ 87934 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICALL2-PSMG3 MICALL2 chr7 1459184 - PSMG3 chr7 1567850 - Exonic hg38 CESC TCGA-C5-A1BM-01A 27 118 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 87935 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF667-ZSCAN5B ZNF667 chr19 56471699 - ZSCAN5B chr19 56192053 - Exonic hg38 CESC TCGA-C5-A1M5-01A 3 10 5'UTR-CDS Intra-chr q13.43 Transcription factor q13.43 Transcription factor Seq+ 87936 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL22A1-ZFAT COL22A1 chr8 138591424 - ZFAT chr8 134637712 - Exonic hg38 CESC TCGA-C5-A1M5-01A 2 6 In-Frame Intra-chr q24.3 q24.22 Transcription factor Seq+ 87937 ChimerSeq TCGA FAWG TCGA_RNA-Seq NME6-SPINK8 NME6 chr3 48296727 - SPINK8 chr3 48309946 - Exonic hg38 CESC TCGA-C5-A1M6-01A 63 580 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 87938 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIAS4-CCDC94 PIAS4 chr19 4013349 + CCDC94 chr19 4267624 + Exonic hg38 CESC TCGA-C5-A1M7-01A 6 46 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 87939 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIPA1-RHOD SIPA1 chr11 65647658 + RHOD chr11 67065896 + Exonic hg38 CESC TCGA-C5-A1M8-01A 4 6 Out-of-frame Intra-chr q13.1 q13.2 Seq+ 87940 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX29-CIITA SNX29 chr16 12078915 + CIITA chr16 10895282 + Exonic hg38 CESC TCGA-C5-A1MJ-01A 4 19 In-Frame Intra-chr p13.13 p13.13 Seq+ 87941 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPH7-ZMYND19 DPH7 chr9 137574208 - ZMYND19 chr9 137587107 - Exonic hg38 CESC TCGA-C5-A1MJ-01A 1 7 Out-of-frame Intra-chr q34.3 q34.3 87942 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM50B-XXYLT1 TMEM50B chr21 33479838 - XXYLT1 chr3 195070111 - Exonic hg38 CESC TCGA-C5-A1MK-01A 7 45 5'UTR-CDS Inter-chr q29 Seq+ 87943 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASXL1-BPIFB2 ASXL1 chr20 32358832 + BPIFB2 chr20 33008541 + Exonic hg38 CESC TCGA-C5-A1MK-01A 7 22 CDS-5'UTR Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 87944 ChimerSeq TCGA FAWG TCGA_RNA-Seq LEXM-TTC4 LEXM chr1 54808011 + TTC4 chr1 54737582 + Exonic hg38 CESC TCGA-C5-A1MK-01A 5 26 In-Frame Intra-chr p32.3 p32.3 Tumor suppressor gene 87945 ChimerSeq TCGA FAWG TCGA_RNA-Seq TASP1-DHCR7 TASP1 chr20 13435044 - DHCR7 chr11 71441440 - Exonic hg38 CESC TCGA-C5-A1MK-01A 2 21 In-Frame Inter-chr p12.1 q13.4 Seq+ 87946 ChimerSeq TCGA FAWG TCGA_RNA-Seq GON4L-SERPINB7 GON4L chr1 155813634 - SERPINB7 chr18 63782355 + Exonic hg38 CESC TCGA-C5-A1MK-01A 3 5 CDS-5'UTR Inter-chr q22 q21.33 Seq+ 87947 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L1-IFT52 EPB41L1 chr20 36112480 + IFT52 chr20 43635926 + Exonic hg38 CESC TCGA-C5-A1MK-01A 1 5 5'UTR-CDS Intra-chr q11.23 q13.12 87948 ChimerSeq TCGA FAWG TCGA_RNA-Seq FXR1-NAALADL2 FXR1 chr3 180935231 + NAALADL2 chr3 175447229 + Exonic hg38 CESC TCGA-C5-A1ML-01A 11 30 Out-of-frame Intra-chr q26.33 q26.31 Seq+ 87949 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAALADL2-EPHB3 NAALADL2 chr3 175324325 + EPHB3 chr3 184581253 + Exonic hg38 CESC TCGA-C5-A1ML-01A 1 9 Out-of-frame Intra-chr q26.31 q27.1 Tumor suppressor gene 87950 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK8-ARFIP1 MAPK8 chr10 48325965 + ARFIP1 chr4 152829625 + Exonic hg38 CESC TCGA-C5-A2LT-01A 4 27 5'UTR-5'UTR Inter-chr q11.22 Oncogene q31.3 Seq+ 87951 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRRD-SNX32 SRRD chr22 26486063 + SNX32 chr11 65849478 + Exonic hg38 CESC TCGA-C5-A2LT-01A 4 2 Out-of-frame Inter-chr q12.1 q13.1 Seq+ 87952 ChimerSeq TCGA FAWG TCGA_RNA-Seq EMC10-ASPDH EMC10 chr19 50480977 + ASPDH chr19 50511773 - Exonic hg38 CESC TCGA-C5-A2LV-01A 1 6 Out-of-frame Intra-chr q13.33 q13.33 87953 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-IKZF3 ERBB2 chr17 39716605 + IKZF3 chr17 39829488 - Exonic hg38 CESC TCGA-C5-A2LX-01A 5 26 Out-of-frame Intra-chr q12 Oncogene q21.1 Tumor suppressor gene Transcription factor Seq+ 87954 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKD1-UBE2I PKD1 chr16 2105322 - UBE2I chr16 1315654 + Exonic hg38 CESC TCGA-C5-A2LX-01A 6 3 In-Frame Intra-chr p13.3 CAMK:PKD Tumor suppressor gene p13.3 Seq+ 87955 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR205HG-RPL14 MIR205HG chr1 209432707 + RPL14 chr3 40461608 + Exonic hg38 CESC TCGA-C5-A2LX-01A 1000 1000 3'UTR-CDS Inter-chr q32.2 p22.1 87956 ChimerSeq TCGA FAWG TCGA_RNA-Seq HCN2-ALS2CR11 HCN2 chr19 590577 + ALS2CR11 chr2 201547610 - Exonic hg38 CESC TCGA-C5-A2LZ-01A 1 4 Out-of-frame Inter-chr p13.3 Seq+ 87957 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R37-GLTSCR1 PPP1R37 chr19 45093527 + GLTSCR1 chr19 47670443 + Exonic hg38 CESC TCGA-C5-A2M1-01A 4 11 Out-of-frame Intra-chr q13.32 Tumor suppressor gene Seq+ 87958 ChimerSeq TCGA FAWG TCGA_RNA-Seq GGNBP2-NEBL GGNBP2 chr17 36545817 + NEBL chr10 20812940 - Exonic hg38 CESC TCGA-C5-A3HD-01B 36 154 3'UTR-CDS Inter-chr Tumor suppressor gene p12.31 Seq+ 87959 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEN1-PTPRJ MEN1 chr11 64809665 - PTPRJ chr11 48127780 + Exonic hg38 CESC TCGA-C5-A3HD-01B 9 63 In-Frame Intra-chr q13.1 Oncogene Tumor suppressor gene p11.2 Tumor suppressor gene Seq+ 87960 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEBL-ZNHIT3 NEBL chr10 20812769 - ZNHIT3 chr17 36497606 + Exonic hg38 CESC TCGA-C5-A3HD-01B 2 32 CDS-3'UTR Inter-chr p12.31 q12 87961 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM177A1-PSMA6 FAM177A1 chr14 35046628 + PSMA6 chr14 35317249 + Exonic hg38 CESC TCGA-C5-A3HD-01B 3 7 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 87962 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANGO6-NAA15 TANGO6 chr16 68907575 + NAA15 chr4 139386133 + Exonic hg38 CESC TCGA-C5-A3HD-01B 1 5 Out-of-frame Inter-chr q22.1 q31.1 87963 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUL4A-TMCO3 CUL4A chr13 113255125 + TMCO3 chr13 113539357 + Exonic hg38 CESC TCGA-C5-A3HD-01B 1 4 In-Frame Intra-chr q34 q34 87964 ChimerSeq TCGA FAWG TCGA_RNA-Seq FARSA-EFCAB6 FARSA chr19 12933550 - EFCAB6 chr22 43716972 - Exonic hg38 CESC TCGA-C5-A3HE-01A 1 4 Out-of-frame Inter-chr p13.13 q13.31 87965 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPEN-DNAJC16 SPEN chr1 15848150 + DNAJC16 chr1 15559526 + Exonic hg38 CESC TCGA-C5-A3HF-01A 13 14 Out-of-frame Intra-chr p36.21 Transcription factor p36.21 Seq+ 87966 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS6-BZW2 INTS6 chr13 51451025 - BZW2 chr7 16674412 + Exonic hg38 CESC TCGA-C5-A7CG-01A 6 15 Out-of-frame Inter-chr q14.3 Tumor suppressor gene p21.1 Seq+ 87967 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLGA5-RNF212B GOLGA5 chr14 92824644 + RNF212B chr14 23193325 + Exonic hg38 CESC TCGA-C5-A7CH-01A 5 1 CDS-5'UTR Intra-chr q32.12 q11.2 87968 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2B1-CEP290 ATP2B1 chr12 89616802 - CEP290 chr12 88084852 - Exonic hg38 CESC TCGA-C5-A7CH-01A 1 6 In-Frame Intra-chr q21.33 q21.32 Seq+ 87969 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUNX1-RCAN1 RUNX1 chr21 34859474 - RCAN1 chr21 34523710 - Exonic hg38 CESC TCGA-C5-A7CJ-01A 3 6 Out-of-frame Intra-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q22.12 Seq+ 87970 ChimerSeq TCGA FAWG TCGA_RNA-Seq MX1-ERG MX1 chr21 41437152 + ERG chr21 38445621 - Exonic hg38 CESC TCGA-C5-A7CJ-01A 1 9 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor 87971 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGO1-EFHB SGO1 chr3 20186059 - EFHB chr3 19905749 - Exonic hg38 CESC TCGA-C5-A7CK-01A 8 43 5'UTR-CDS Intra-chr p24.3 p24.3 87972 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF532-DOK6 ZNF532 chr18 58865579 + DOK6 chr18 69841244 + Exonic hg38 CESC TCGA-C5-A7CK-01A 1 9 5'UTR-CDS Intra-chr q21.32 Transcription factor q22.2 Seq+ 87973 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD40-NFIX ANKRD40 chr17 50707521 - NFIX chr19 13025021 + Exonic hg38 CESC TCGA-C5-A7CM-01A 5 6 Out-of-frame Inter-chr q21.33 p13.13 Transcription factor Seq+ 87974 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRCP-ADAM22 CRCP chr7 66114970 + ADAM22 chr7 88075626 + Exonic hg38 CESC TCGA-C5-A7CM-01A 2 5 In-Frame Intra-chr q11.21 q21.12 Seq+ 87975 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD6-CTNNBL1 CHD6 chr20 41512846 - CTNNBL1 chr20 37859899 + Exonic hg38 CESC TCGA-C5-A7CO-01A 2 24 In-Frame Intra-chr q12 q11.23 Seq+ 87976 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHCY-ACTR5 AHCY chr20 34281027 - ACTR5 chr20 38752131 + Exonic hg38 CESC TCGA-C5-A7CO-01A 3 4 3'UTR-CDS Intra-chr q11.22 q11.23 Seq+ 87977 ChimerSeq TCGA FAWG TCGA_RNA-Seq F11R-USF1 F11R chr1 161021010 - USF1 chr1 161043360 - Exonic hg38 CESC TCGA-C5-A7CO-01A 2 8 CDS-5'UTR Intra-chr q23.3 q23.3 Transcription factor Seq+ 87978 ChimerSeq TCGA FAWG TCGA_RNA-Seq YAE1D1-GJC3 YAE1D1 chr7 39566547 + GJC3 chr7 99923603 - Exonic hg38 CESC TCGA-C5-A7UC-01A 4 16 Out-of-frame Intra-chr p14.1 q22.1 Seq+ 87979 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASCC1-MICU1 ASCC1 chr10 72196811 - MICU1 chr10 72379583 - Exonic hg38 CESC TCGA-C5-A7UC-01A 3 10 3'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 87980 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD1-DPEP2 NSD1 chr5 177192019 + DPEP2 chr16 67989398 - Exonic hg38 CESC TCGA-C5-A7UH-01A 3 59 In-Frame Inter-chr q35.3 Oncogene q22.1 Seq+ 87981 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOGA1-RBL1 SOGA1 chr20 36829054 - RBL1 chr20 37003866 - Exonic hg38 CESC TCGA-C5-A7UH-01A 3 13 In-Frame Intra-chr q11.23 q11.23 Tumor suppressor gene Seq+ 87982 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPHB3-P2RY12 EPHB3 chr3 184562353 + P2RY12 chr3 151340760 - Exonic hg38 CESC TCGA-C5-A7UH-01A 2 5 CDS-5'UTR Intra-chr q27.1 Tumor suppressor gene q25.1 Seq+ 87983 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMAN2-NOP16 LMAN2 chr5 177351173 - NOP16 chr5 176386909 - Exonic hg38 CESC TCGA-C5-A7X3-01A 14 35 In-Frame Intra-chr q35.3 q35.2 Seq+ 87984 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKD2-RCN3 PRKD2 chr19 46711643 - RCN3 chr19 49543191 + Exonic hg38 CESC TCGA-C5-A7X3-01A 10 45 Out-of-frame Intra-chr q13.32 q13.33 Seq+ 87985 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRR12-CDC42EP5 PRR12 chr19 49621622 + CDC42EP5 chr19 54471685 - Exonic hg38 CESC TCGA-C5-A7X3-01A 4 30 CDS-5'UTR Intra-chr q13.33 Transcription factor Seq+ 87986 ChimerSeq TCGA FAWG TCGA_RNA-Seq KREMEN1-HSCB KREMEN1 chr22 29142100 + HSCB chr22 28751241 + Exonic hg38 CESC TCGA-C5-A7X3-01A 7 14 In-Frame Intra-chr q12.1 q12.1 Seq+ 87987 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF384-CDCA3 ZNF384 chr12 6669031 - CDCA3 chr12 6849664 - Exonic hg38 CESC TCGA-C5-A7X3-01A 5 15 Out-of-frame Intra-chr p13.31 Oncogene Transcription factor p13.31 Seq+ 87988 ChimerSeq TCGA FAWG TCGA_RNA-Seq WEE1-CHRNA3 WEE1 chr11 9586856 + CHRNA3 chr15 78602264 - Exonic hg38 CESC TCGA-C5-A7X3-01A 4 13 In-Frame Inter-chr p15.4 q25.1 Seq+ 87989 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D17-PRR12 TBC1D17 chr19 49887573 + PRR12 chr19 49614533 + Exonic hg38 CESC TCGA-C5-A7X3-01A 1 6 In-Frame Intra-chr q13.33 q13.33 Transcription factor Seq+ 87990 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCTP2-PARP6 MCTP2 chr15 94358612 + PARP6 chr15 72271287 - Exonic hg38 CESC TCGA-C5-A7X3-01A 1 3 CDS-5'UTR Intra-chr q26.2 q23 Seq+ 87991 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM87B-MERTK TMEM87B chr2 112055756 + MERTK chr2 111994251 + Exonic hg38 CESC TCGA-C5-A7X5-01A 62 157 In-Frame Intra-chr q13 q13 Seq+ 87992 ChimerSeq TCGA FAWG TCGA_RNA-Seq FDX1-KNCN FDX1 chr11 110435958 + KNCN chr1 46550002 - Exonic hg38 CESC TCGA-C5-A7X5-01A 16 51 In-Frame Inter-chr q22.3 p33 Seq+ 87993 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRD4-CSN2 BRD4 chr19 15332290 - CSN2 chr4 69961007 - Exonic hg38 CESC TCGA-C5-A7X5-01A 25 11 5'UTR-5'UTR Inter-chr p13.12 Atypical:BRD Tumor suppressor gene Seq+ 87994 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRD4-SLC1A6 BRD4 chr19 15332290 - SLC1A6 chr19 14972917 - Exonic hg38 CESC TCGA-C5-A7X5-01A 22 16 5'UTR-5'UTR Intra-chr p13.12 Atypical:BRD p13.12 87995 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF529-FFAR2 ZNF529 chr19 36572333 - FFAR2 chr19 35449714 + Exonic hg38 CESC TCGA-C5-A7X5-01A 8 42 5'UTR-5'UTR Intra-chr q13.12 Transcription factor q13.12 87996 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOB4-COQ10B MOB4 chr2 197540437 + COQ10B chr2 197470070 + Exonic hg38 CESC TCGA-C5-A7X5-01A 6 26 In-Frame Intra-chr q33.1 q33.1 Seq+ 87997 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2O-MXRA7 UBE2O chr17 76452725 - MXRA7 chr17 76688176 - Exonic hg38 CESC TCGA-C5-A7X5-01A 6 22 In-Frame Intra-chr q25.1 q25.1 Seq+ 87998 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF148-OSBPL11 ZNF148 chr3 125277726 - OSBPL11 chr3 125538633 - Exonic hg38 CESC TCGA-C5-A7X5-01A 3 8 Out-of-frame Intra-chr q21.2 Transcription factor q21.2 Seq+ 87999 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIZ-SLPI KIZ chr20 21136552 + SLPI chr20 45253733 - Exonic hg38 CESC TCGA-C5-A7X5-01A 1 10 Out-of-frame Intra-chr p11.23 q13.12 88000 ChimerSeq TCGA FAWG TCGA_RNA-Seq WARS2-ZAR1 WARS2 chr1 119076350 - ZAR1 chr4 48494101 + Exonic hg38 CESC TCGA-C5-A7X5-01A 1 10 In-Frame Inter-chr p12 p11 Seq+ 88001 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANAPC1-LIMS1 ANAPC1 chr2 111838438 - LIMS1 chr2 108675878 + Exonic hg38 CESC TCGA-C5-A7X5-01A 1 5 Out-of-frame Intra-chr q13 Tumor suppressor gene q12.3 88002 ChimerSeq TCGA FAWG TCGA_RNA-Seq WARS2-TMEM87B WARS2 chr1 119076350 - TMEM87B chr2 112081057 + Exonic hg38 CESC TCGA-C5-A7X5-01A 1 5 Out-of-frame Inter-chr p12 q13 Seq+ 88003 ChimerSeq TCGA FAWG TCGA_RNA-Seq MUC3A-FBXL13 MUC3A chr7 100966743 + FBXL13 chr7 102884312 - Exonic hg38 CESC TCGA-C5-A7X5-01A 1 2 Out-of-frame Intra-chr q22.1 q22.1 Tumor suppressor gene 88004 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHMT1-GFI1B EHMT1 chr9 137619049 + GFI1B chr9 132978464 + Exonic hg38 CESC TCGA-C5-A7XC-01A 14 15 5'UTR-5'UTR Intra-chr q34.3 q34.13 Transcription factor Seq+ 88005 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAF3-SFXN1 TRAF3 chr14 102830472 + SFXN1 chr5 175492095 + Exonic hg38 CESC TCGA-C5-A8XH-01A 5 9 5'UTR-5'UTR Inter-chr q32.32 q35.2 Seq+ 88006 ChimerSeq TCGA FAWG TCGA_RNA-Seq RXRA-BCAS3 RXRA chr9 134326659 + BCAS3 chr17 60868576 + Exonic hg38 CESC TCGA-C5-A8XH-01A 3 5 Out-of-frame Inter-chr q34.2 Transcription factor q23.2 Seq+ 88007 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGHJ2-IGHGP IGHJ2 chr14 105865199 - IGHGP chr14 105668565 - Exonic hg38 CESC TCGA-C5-A8XI-01A 2 13 Out-of-frame Intra-chr 88008 ChimerSeq TCGA FAWG TCGA_RNA-Seq OTUD3-HES2 OTUD3 chr1 19882734 + HES2 chr1 6413282 - Exonic hg38 CESC TCGA-C5-A8YQ-01A 16 90 CDS-3'UTR Intra-chr p36.13 p36.31 Transcription factor 88009 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACOT7-MIB2 ACOT7 chr1 6318492 - MIB2 chr1 1625286 + Exonic hg38 CESC TCGA-C5-A8YQ-01A 9 44 In-Frame Intra-chr p36.31 p36.33 Seq+ 88010 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM15-ZYG11B RBM15 chr1 110340002 + ZYG11B chr1 52784877 + Exonic hg38 CESC TCGA-C5-A8YQ-01A 14 20 Out-of-frame Intra-chr p13.3 p32.3 Seq+ 88011 ChimerSeq TCGA FAWG TCGA_RNA-Seq PATJ-CENPS PATJ chr1 61827583 + CENPS chr1 10433842 + Exonic hg38 CESC TCGA-C5-A8YQ-01A 10 34 In-Frame Intra-chr p31.3 p36.22 Tumor suppressor gene Transcription factor 88012 ChimerSeq TCGA FAWG TCGA_RNA-Seq WASF2-ACOT7 WASF2 chr1 27489986 - ACOT7 chr1 6294980 - Exonic hg38 CESC TCGA-C5-A8YQ-01A 1 6 5'UTR-CDS Intra-chr p36.11 p36.31 Seq+ 88013 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPHB2-SYNC EPHB2 chr1 22785076 + SYNC chr1 32696044 - Exonic hg38 CESC TCGA-C5-A8YQ-01A 1 3 Out-of-frame Intra-chr p36.12 Tumor suppressor gene p35.1 88014 ChimerSeq TCGA FAWG TCGA_RNA-Seq CALD1-TMEM140 CALD1 chr7 134867804 + TMEM140 chr7 135164418 + Exonic hg38 CESC TCGA-C5-A8YR-01A 2 25 CDS-5'UTR Intra-chr q33 q33 Seq+ 88015 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCG2-CMIP PLCG2 chr16 81786182 + CMIP chr16 81699685 + Exonic hg38 CESC TCGA-C5-A8YR-01A 1 2 Out-of-frame Intra-chr q23.3 q23.2 88016 ChimerSeq TCGA FAWG TCGA_RNA-Seq BLNK-TLL2 BLNK chr10 96271352 - TLL2 chr10 96397302 - Exonic hg38 CESC TCGA-C5-A8YR-01A 1 1 Out-of-frame Intra-chr q24.1 Oncogene Tumor suppressor gene q24.1 88017 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNDC3B-OT FNDC3B chr3 172112590 + OT chr3 181699598 + Exonic hg38 CESC TCGA-C5-A8ZZ-01A 17 138 Out-of-frame Intra-chr q26.31 88018 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNDC3B-SOX2OT_exon4 FNDC3B chr3 172112590 + SOX2OT_exon4 chr3 181715185 + Exonic hg38 CESC TCGA-C5-A8ZZ-01A 9 24 Out-of-frame Intra-chr q26.31 q26.33 88019 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNDC3B-TPRG1 FNDC3B chr3 172112590 + TPRG1 chr3 189310386 + Exonic hg38 CESC TCGA-C5-A8ZZ-01A 1 2 Out-of-frame Intra-chr q26.31 q28 88020 ChimerSeq TCGA FAWG TCGA_RNA-Seq ME1-PGM3 ME1 chr6 83346173 - PGM3 chr6 83176060 - Exonic hg38 CESC TCGA-C5-A901-01A 1 2 In-Frame Intra-chr q14.2 q14.1 88021 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDF4-DVL1 SDF4 chr1 1223244 - DVL1 chr1 1342758 - Exonic hg38 CESC TCGA-C5-A902-01A 7 63 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 88022 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-RPS6KB1 BCAS3 chr17 60677914 + RPS6KB1 chr17 59912684 + Exonic hg38 CESC TCGA-C5-A907-01A 33 39 5'UTR-5'UTR Intra-chr q23.2 q23.1 Oncogene Seq+ 88023 ChimerSeq TCGA FAWG TCGA_RNA-Seq VRK3-PPP6R1 VRK3 chr19 50000790 - PPP6R1 chr19 55242488 - Exonic hg38 CESC TCGA-C5-A907-01A 7 43 In-Frame Intra-chr q13.33 CK1:VRK q13.42 Seq+ 88024 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF677-WDR88 ZNF677 chr19 53254834 - WDR88 chr19 33175396 + Exonic hg38 CESC TCGA-C5-A907-01A 8 11 5'UTR-5'UTR Intra-chr q13.42 Transcription factor q13.11 Seq+ 88025 ChimerSeq TCGA FAWG TCGA_RNA-Seq LSM14A-KNDC1 LSM14A chr19 34172763 + KNDC1 chr10 133183344 + Exonic hg38 CESC TCGA-C5-A907-01A 4 26 3'UTR-CDS Inter-chr q26.3 Seq+ 88026 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPUL1-BRSK1 HNRNPUL1 chr19 41281275 + BRSK1 chr19 55284521 + Exonic hg38 CESC TCGA-C5-A907-01A 2 14 Out-of-frame Intra-chr q13.2 q13.42 CAMK:CAMKL Tumor suppressor gene 88027 ChimerSeq TCGA FAWG TCGA_RNA-Seq EMP2-SNN EMP2 chr16 10547540 - SNN chr16 11675975 + Exonic hg38 CESC TCGA-DG-A2KH-01A 41 123 CDS-5'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 88028 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSP-RCAN2 DSP chr6 7572068 + RCAN2 chr6 46248896 - Exonic hg38 CESC TCGA-DG-A2KL-01A 78 505 In-Frame Intra-chr p24.3 Tumor suppressor gene p12.3 Seq+ 88029 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLASP2-GLB1 CLASP2 chr3 33632292 - GLB1 chr3 33072713 - Exonic hg38 CESC TCGA-DG-A2KL-01A 1 22 In-Frame Intra-chr p22.3 p22.3 88030 ChimerSeq TCGA FAWG TCGA_RNA-Seq GMDS-KIF6 GMDS chr6 2245321 - KIF6 chr6 39720811 - Exonic hg38 CESC TCGA-DG-A2KL-01A 1 3 In-Frame Intra-chr p25.3 p21.2 Seq+ 88031 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD27-TDRD12 ANKRD27 chr19 32615658 - TDRD12 chr19 32731725 + Exonic hg38 CESC TCGA-DG-A2KM-01A 9 28 In-Frame Intra-chr q13.11 q13.11 Seq+ 88032 ChimerSeq TCGA FAWG TCGA_RNA-Seq BIRC2-TMEM123 BIRC2 chr11 102368548 + TMEM123 chr11 102402206 - Exonic hg38 CESC TCGA-DS-A0VL-01A 134 527 In-Frame Intra-chr q22.2 Oncogene q22.2 Seq+ 88033 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP25-CYYR1 USP25 chr21 15818846 + CYYR1 chr21 26468631 - Exonic hg38 CESC TCGA-DS-A0VL-01A 6 38 Out-of-frame Intra-chr q21.1 q21.3 Seq+ 88034 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2D2-C9orf3 UBE2D2 chr5 139526612 + C9orf3 chr9 95086682 + Exonic hg38 CESC TCGA-DS-A0VL-01A 2 1 Out-of-frame Inter-chr q31.2 q22.32 88035 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK3-SUDS3 TAOK3 chr12 118372648 - SUDS3 chr12 118386114 + Exonic hg38 CESC TCGA-DS-A0VM-01A 8 23 5'UTR-CDS Intra-chr q24.23 q24.23 Seq+ 88036 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATAD2B-S100A11 GATAD2B chr1 153922733 - S100A11 chr1 152033800 - Exonic hg38 CESC TCGA-DS-A0VM-01A 1 6 5'UTR-CDS Intra-chr Transcription factor q21.3 Tumor suppressor gene 88037 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN13-AFF1 PTPN13 chr4 86774531 + AFF1 chr4 86973830 + Exonic hg38 CESC TCGA-DS-A0VN-01A 1 6 CDS-5'UTR Intra-chr q21.3 Tumor suppressor gene q21.3 Oncogene Seq+ 88038 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRSF7-HNRNPLL SRSF7 chr2 38746144 - HNRNPLL chr2 38602600 - Exonic hg38 CESC TCGA-DS-A1O9-01A 17 54 In-Frame Intra-chr p22.1 p22.1 Seq+ 88039 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHH2-THADA PLEKHH2 chr2 43644796 + THADA chr2 43527988 - Exonic hg38 CESC TCGA-DS-A1O9-01A 3 49 In-Frame Intra-chr p21 p21 88040 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIPA1-FRMD8 SIPA1 chr11 65645129 + FRMD8 chr11 65411242 + Exonic hg38 CESC TCGA-DS-A1O9-01A 8 28 In-Frame Intra-chr q13.1 q13.1 Seq+ 88041 ChimerSeq TCGA FAWG TCGA_RNA-Seq C16orf74-EMC8 C16orf74 chr16 85750926 - EMC8 chr16 85781280 - Exonic hg38 CESC TCGA-DS-A1O9-01A 4 38 5'UTR-CDS Intra-chr q24.1 q24.1 Seq+ 88042 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGM2L1-RAB6A PGM2L1 chr11 74336684 - RAB6A chr11 73679927 - Exonic hg38 CESC TCGA-DS-A1O9-01A 3 22 Out-of-frame Intra-chr q13.4 q13.4 88043 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPAL3-GRHL3 NIPAL3 chr1 24445244 + GRHL3 chr1 24331426 + Exonic hg38 CESC TCGA-DS-A1O9-01A 4 17 Out-of-frame Intra-chr p36.11 p36.11 Transcription factor Seq+ 88044 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPHOSPH9-CDK2AP1 MPHOSPH9 chr12 123160781 - CDK2AP1 chr12 123267282 - Exonic hg38 CESC TCGA-DS-A1O9-01A 1 7 Out-of-frame Intra-chr q24.31 q24.31 Tumor suppressor gene 88045 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM13C-S100P FAM13C chr10 59352270 - S100P chr4 6696893 + Exonic hg38 CESC TCGA-DS-A1OB-01A 1 12 In-Frame Inter-chr q21.1 p16.1 Seq+ 88046 ChimerSeq TCGA FAWG TCGA_RNA-Seq PMF1-RAB25 PMF1 chr1 156213176 + RAB25 chr1 156068270 + Exonic hg38 CESC TCGA-DS-A1OC-01A 21 188 In-Frame Intra-chr q22 q22 Tumor suppressor gene Seq+ 88047 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHAF1B-DOPEY2 CHAF1B chr21 36391668 + DOPEY2 chr21 36293320 + Exonic hg38 CESC TCGA-DS-A1OC-01A 17 132 Out-of-frame Intra-chr q22.12 q22.12 Seq+ 88048 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2C-DNAH11 KMT2C chr7 152309966 - DNAH11 chr7 21816467 + Exonic hg38 CESC TCGA-DS-A1OC-01A 25 73 In-Frame Intra-chr q36.1 Oncogene Tumor suppressor gene p15.3 88049 ChimerSeq TCGA FAWG TCGA_RNA-Seq IPPK-BICD2 IPPK chr9 92656456 - BICD2 chr9 92729236 - Exonic hg38 CESC TCGA-DS-A1OC-01A 7 52 In-Frame Intra-chr q22.31 q22.31 Seq+ 88050 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL19-RNF40 FBXL19 chr16 30930584 + RNF40 chr16 30773938 + Exonic hg38 CESC TCGA-DS-A1OC-01A 11 25 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 88051 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCGF3-PDE6B PCGF3 chr4 705970 + PDE6B chr4 653852 + Exonic hg38 CESC TCGA-DS-A1OC-01A 6 20 5'UTR-5'UTR Intra-chr p16.3 p16.3 Seq+ 88052 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPN1-MRPL49 CAPN1 chr11 65188746 + MRPL49 chr11 65124502 + Exonic hg38 CESC TCGA-DS-A1OC-01A 4 24 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 88053 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUB1-ECT2 SUB1 chr5 32585625 + ECT2 chr3 172761610 + Exonic hg38 CESC TCGA-DS-A1OC-01A 6 16 5'UTR-CDS Inter-chr p13.3 q26.31 Tumor suppressor gene Seq+ 88054 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM54-TRIM62 TMEM54 chr1 32898126 - TRIM62 chr1 33165566 - Exonic hg38 CESC TCGA-DS-A1OC-01A 3 14 In-Frame Intra-chr p35.1 p35.1 Tumor suppressor gene Seq+ 88055 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCEA3-ASAP3 TCEA3 chr1 23417249 - ASAP3 chr1 23456194 - Exonic hg38 CESC TCGA-DS-A1OC-01A 4 9 5'UTR-5'UTR Intra-chr Seq+ 88056 ChimerSeq TCGA FAWG TCGA_RNA-Seq NHSL1-REPS1 NHSL1 chr6 138692476 - REPS1 chr6 138921124 - Exonic hg38 CESC TCGA-DS-A1OC-01A 4 5 5'UTR-CDS Intra-chr q24.1 q24.1 Seq+ 88057 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP11B-MAP3K13 ATP11B chr3 182828209 + MAP3K13 chr3 185428497 + Exonic hg38 CESC TCGA-DS-A1OC-01A 3 6 CDS-5'UTR Intra-chr q26.33 Oncogene q27.2 Seq+ 88058 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM129B-SHMT1 FAM129B chr9 127531648 - SHMT1 chr17 18356000 - Exonic hg38 CESC TCGA-DS-A1OC-01A 3 3 Out-of-frame Inter-chr q34.11 p11.2 Seq+ 88059 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSENEN-IGFLR1 PSENEN chr19 35746523 + IGFLR1 chr19 35739769 - Exonic hg38 CESC TCGA-DS-A1OC-01A 2 7 In-Frame Intra-chr q13.12 q13.12 88060 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIC-LSM7 NFIC chr19 3435207 + LSM7 chr19 2324196 - Exonic hg38 CESC TCGA-DS-A1OD-01A 62 318 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 88061 ChimerSeq TCGA FAWG TCGA_RNA-Seq FZR1-GNG7 FZR1 chr19 3506474 + GNG7 chr19 2520725 - Exonic hg38 CESC TCGA-DS-A1OD-01A 41 244 5'UTR-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 88062 ChimerSeq TCGA FAWG TCGA_RNA-Seq VAMP1-CD27 VAMP1 chr12 6470530 - CD27 chr12 6445424 + Exonic hg38 CESC TCGA-DS-A1OD-01A 11 33 3'UTR-3'UTR Intra-chr p13.31 p13.31 Seq+ 88063 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGD-PEX14 PGD chr1 10400572 + PEX14 chr1 10536213 + Exonic hg38 CESC TCGA-DS-A1OD-01A 2 3 In-Frame Intra-chr p36.22 p36.22 Seq+ 88064 ChimerSeq TCGA FAWG TCGA_RNA-Seq FZD6-BAALC FZD6 chr8 103300284 + BAALC chr8 103227989 + Exonic hg38 CESC TCGA-DS-A3LQ-01A 27 84 In-Frame Intra-chr q22.3 q22.3 Seq+ 88065 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806934 + TACC3 chr4 1739702 + Exonic hg38 CESC TCGA-DS-A3LQ-01A 5 47 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 88066 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0930-SMC1B KIAA0930 chr22 45211956 - SMC1B chr22 45345569 - Exonic hg38 CESC TCGA-DS-A3LQ-01A 5 12 In-Frame Intra-chr q13.31 q13.31 Seq+ 88067 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDHD1-DLGAP5 WDHD1 chr14 55007280 - DLGAP5 chr14 55150848 - Exonic hg38 CESC TCGA-DS-A3LQ-01A 1 16 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 88068 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAF1-RPL32 RAF1 chr3 12663813 - RPL32 chr3 12836223 - Exonic hg38 CESC TCGA-DS-A3LQ-01A 2 10 5'UTR-CDS Intra-chr p25.2 TKL:RAF Oncogene p25.2 Seq+ 88069 ChimerSeq TCGA FAWG TCGA_RNA-Seq MATN2-LAPTM4B MATN2 chr8 97941899 + LAPTM4B chr8 97815328 + Exonic hg38 CESC TCGA-DS-A3LQ-01A 3 1 In-Frame Intra-chr q22.1 q22.1 Seq+ 88070 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBX5-NFE2 CBX5 chr12 54252041 - NFE2 chr12 54295304 - Exonic hg38 CESC TCGA-DS-A5RQ-01A 4 9 CDS-5'UTR Intra-chr q13.13 Tumor suppressor gene q13.13 Transcription factor Seq+ 88071 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH8-RFX1 CDH8 chr16 61901179 - RFX1 chr19 13973127 - Exonic hg38 CESC TCGA-DS-A5RQ-01A 2 3 Out-of-frame Inter-chr q21 p13.12 Transcription factor Seq+ 88072 ChimerSeq TCGA FAWG TCGA_RNA-Seq MELTF-DERL2 MELTF chr3 197003901 - DERL2 chr17 5485216 - Exonic hg38 CESC TCGA-DS-A5RQ-01A 2 1 Out-of-frame Inter-chr q29 p13.2 88073 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCA4-CARM1 SMARCA4 chr19 10991323 + CARM1 chr19 10921615 + Exonic hg38 CESC TCGA-DS-A7WF-01A 1 2 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 88074 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-CTTN ERBB2 chr17 39715939 + CTTN chr11 70422940 + Exonic hg38 CESC TCGA-DS-A7WF-01A 1 1 In-Frame Inter-chr q12 Oncogene q13.3 Seq+ 88075 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3BP4-MST1R SH3BP4 chr2 234995376 + MST1R chr3 49899263 - Exonic hg38 CESC TCGA-DS-A7WH-01A 6 74 5'UTR-CDS Inter-chr q37.2 p21.31 Tumor suppressor gene Seq+ 88076 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASXL1-EIF2S2 ASXL1 chr20 32369123 + EIF2S2 chr20 34105545 - Exonic hg38 CESC TCGA-DS-A7WH-01A 5 7 In-Frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.22 Seq+ 88077 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZRANB1-LHPP ZRANB1 chr10 124983688 + LHPP chr10 124613264 + Exonic hg38 CESC TCGA-DS-A7WH-01A 3 12 In-Frame Intra-chr q26.13 q26.13 Seq+ 88078 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF5B-LYG1 EIF5B chr2 99337589 + LYG1 chr2 99292640 - Exonic hg38 CESC TCGA-EA-A1QS-01A 3 14 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 88079 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOC2L-C1orf159 NOC2L chr1 959215 - C1orf159 chr1 1087597 - Exonic hg38 CESC TCGA-EA-A1QS-01A 5 5 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 88080 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB20-PGD ZBTB20 chr3 114801101 - PGD chr1 10419417 + Exonic hg38 CESC TCGA-EA-A1QS-01A 1 19 5'UTR-CDS Inter-chr q13.31 Transcription factor p36.22 Seq+ 88081 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL16A1-SPOCD1 COL16A1 chr1 31689741 - SPOCD1 chr1 31801705 - Exonic hg38 CESC TCGA-EA-A1QS-01A 1 4 In-Frame Intra-chr p35.2 p35.2 88082 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT5B-C11orf72 KMT5B chr11 68213679 - C11orf72 chr11 67605134 - Exonic hg38 CESC TCGA-EA-A1QT-01A 14 139 Out-of-frame Intra-chr q13.2 q13.2 88083 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIC1-PFN2 RIC1 chr9 5629453 + PFN2 chr3 149968550 - Exonic hg38 CESC TCGA-EA-A1QT-01A 21 90 In-Frame Inter-chr p24.1 q25.1 88084 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIC1-MLANA RIC1 chr9 5714003 + MLANA chr9 5890983 + Exonic hg38 CESC TCGA-EA-A1QT-01A 3 19 CDS-5'UTR Intra-chr p24.1 p24.1 88085 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6R3-C11orf80 PPP6R3 chr11 68505271 + C11orf80 chr11 66816053 + Exonic hg38 CESC TCGA-EA-A1QT-01A 1 4 5'UTR-CDS Intra-chr q13.2 q13.2 88086 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKDC-SPIDR PRKDC chr8 47817450 - SPIDR chr8 47595811 + Exonic hg38 CESC TCGA-EA-A1QT-01A 1 3 In-Frame Intra-chr q11.21 Oncogene q11.21 88087 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMD4B-SLFN5 SAMD4B chr19 39357089 + SLFN5 chr17 35264183 + Exonic hg38 CESC TCGA-EA-A3HR-01A 6 28 In-Frame Inter-chr q13.2 q12 Seq+ 88088 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDFY3-MAPK10 WDFY3 chr4 84896911 - MAPK10 chr4 86300860 - Exonic hg38 CESC TCGA-EA-A3HS-01A 1 3 5'UTR-5'UTR Intra-chr q21.23 q21.3 Tumor suppressor gene 88089 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPTC7-GPN3 PPTC7 chr12 110582809 - GPN3 chr12 110457634 - Exonic hg38 CESC TCGA-EA-A3QD-01A 7 20 In-Frame Intra-chr q24.11 q24.11 Seq+ 88090 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL2L10-GNB5 BCL2L10 chr15 52112238 - GNB5 chr15 52154076 - Exonic hg38 CESC TCGA-EA-A3QD-01A 1 3 Out-of-frame Intra-chr q21.2 q21.2 88091 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARL8A-UBE2T ARL8A chr1 202144450 - UBE2T chr1 202335058 - Exonic hg38 CESC TCGA-EA-A3Y4-01A 1 23 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 88092 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF21A-TMEM123 PHF21A chr11 46076754 - TMEM123 chr11 102402206 - Exonic hg38 CESC TCGA-EA-A411-01A 5 9 Out-of-frame Intra-chr p11.2 Transcription factor q22.2 Seq+ 88093 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMAN2L-FAM178B LMAN2L chr2 96733519 - FAM178B chr2 96878493 - Exonic hg38 CESC TCGA-EA-A439-01A 3 16 In-Frame Intra-chr q11.2 q11.2 Seq+ 88094 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALG6-DUT ALG6 chr1 63407126 + DUT chr15 48334417 + Exonic hg38 CESC TCGA-EA-A44S-01A 4 1 In-Frame Inter-chr p31.3 q21.1 Seq+ 88095 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAG1-IL20RB STAG1 chr3 136357720 - IL20RB chr3 137010113 + Exonic hg38 CESC TCGA-EA-A44S-01A 2 1 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 88096 ChimerSeq TCGA FAWG TCGA_RNA-Seq LONP1-RAD51 LONP1 chr19 5700789 - RAD51 chr15 40731055 + Exonic hg38 CESC TCGA-EA-A50E-01A 25 126 In-Frame Inter-chr p13.3 q15.1 Seq+ 88097 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTAF1-MARCH5 BTAF1 chr10 91924090 + 2019_ 3_ 5_ chr10 92349349 + Exonic hg38 CESC TCGA-EA-A50E-01A 1 16 Out-of-frame Intra-chr q23.32 q23.32 Seq+ 88098 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF638-MPHOSPH10 ZNF638 chr2 71276754 + MPHOSPH10 chr2 71132898 + Exonic hg38 CESC TCGA-EA-A50E-01A 1 6 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 88099 ChimerSeq TCGA FAWG TCGA_RNA-Seq PICK1-GCAT PICK1 chr22 38057587 + GCAT chr22 37813463 + Exonic hg38 CESC TCGA-EA-A556-01A 8 36 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 88100 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEX2-BCAM TEX2 chr17 64171100 - BCAM chr19 44811225 + Exonic hg38 CESC TCGA-EA-A556-01A 3 42 In-Frame Inter-chr q23.3 q13.32 Seq+ 88101 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPAMD8-SKAP1 CPAMD8 chr19 16938395 - SKAP1 chr17 48162569 - Exonic hg38 CESC TCGA-EA-A556-01A 1 12 In-Frame Inter-chr p13.11 q21.32 Seq+ 88102 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN13-AFF1 PTPN13 chr4 86689190 + AFF1 chr4 87084120 + Exonic hg38 CESC TCGA-EA-A5ZD-01A 11 118 In-Frame Intra-chr q21.3 Tumor suppressor gene q21.3 Oncogene Seq+ 88103 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAT1-SORBS2 FAT1 chr4 186602903 - SORBS2 chr4 185775366 - Exonic hg38 CESC TCGA-EA-A5ZE-01A 8 23 CDS-5'UTR Intra-chr q35.2 Tumor suppressor gene q35.1 Seq+ 88104 ChimerSeq TCGA FAWG TCGA_RNA-Seq BOLA2-CORO1A BOLA2 chr16 29454017 - CORO1A chr16 30185208 + Exonic hg38 CESC TCGA-EA-A5ZE-01A 1000 1000 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 88105 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIP12-SLC16A14 TRIP12 chr2 229858772 - SLC16A14 chr2 230037531 - Exonic hg38 CESC TCGA-EA-A97N-01A 1 7 In-Frame Intra-chr q36.3 q36.3 Seq+ 88106 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIOK1-EYS RIOK1 chr6 7414390 + EYS chr6 65296119 - Exonic hg38 CESC TCGA-EK-A2H0-01A 19 67 Out-of-frame Intra-chr p24.3 Atypical:RIO q12 Seq+ 88107 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCT3-IQGAP3 CCT3 chr1 156310558 - IQGAP3 chr1 156540916 - Exonic hg38 CESC TCGA-EK-A2H0-01A 3 30 Out-of-frame Intra-chr q22 q22 Seq+ 88108 ChimerSeq TCGA FAWG TCGA_RNA-Seq PXN-RAB35 PXN chr12 120265617 - RAB35 chr12 120108467 - Exonic hg38 CESC TCGA-EK-A2H0-01A 1 7 In-Frame Intra-chr q24.23 q24.23 88109 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDH3B1-PC ALDH3B1 chr11 68019255 + PC chr11 66872159 - Exonic hg38 CESC TCGA-EK-A2IP-01A 1 4 5'UTR-5'UTR Intra-chr q13.2 q13.2 88110 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA6-AHCY NCOA6 chr20 34768464 - AHCY chr20 34295585 - Exonic hg38 CESC TCGA-EK-A2IR-01A 7 32 In-Frame Intra-chr q11.22 q11.22 Seq+ 88111 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4C-DMRT3 KDM4C chr9 6814745 + DMRT3 chr9 990041 + Exonic hg38 CESC TCGA-EK-A2IR-01A 5 21 Out-of-frame Intra-chr p24.1 p24.3 Transcription factor Seq+ 88112 ChimerSeq TCGA FAWG TCGA_RNA-Seq TESK2-GNA12 TESK2 chr1 45385912 - GNA12 chr7 2795143 - Exonic hg38 CESC TCGA-EK-A2IR-01A 4 20 In-Frame Inter-chr p34.1 TKL:LISK p22.2 Seq+ 88113 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC39B-LURAP1L TTC39B chr9 15307084 - LURAP1L chr9 12821386 + Exonic hg38 CESC TCGA-EK-A2PG-01A 17 88 In-Frame Intra-chr p22.3 p23 Seq+ 88114 ChimerSeq TCGA FAWG TCGA_RNA-Seq TWF2-WDR82 TWF2 chr3 52238992 - WDR82 chr3 52257519 - Exonic hg38 CESC TCGA-EK-A2PG-01A 3 27 Out-of-frame Intra-chr p21.2 p21.2 Seq+ 88115 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP295-SMCO4 CEP295 chr11 93667807 + SMCO4 chr11 93479269 - Exonic hg38 CESC TCGA-EK-A2PG-01A 3 8 CDS-5'UTR Intra-chr q21 q21 88116 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAFB-C19orf70 SAFB chr19 5653420 + C19orf70 chr19 5678648 - Exonic hg38 CESC TCGA-EK-A2PG-01A 1 2 Out-of-frame Intra-chr p13.3 Tumor suppressor gene Transcription factor p13.3 88117 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKMYT1-FLYWCH1 PKMYT1 chr16 2969888 - FLYWCH1 chr16 2914176 + Exonic hg38 CESC TCGA-EK-A2PI-01A 1 28 3'UTR-5'UTR Intra-chr p13.3 p13.3 Transcription factor 88118 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF1-ITGB1BP2 TAF1 chrX 71368170 + ITGB1BP2 chrX 71303627 + Exonic hg38 CESC TCGA-EK-A2PI-01A 1 9 Out-of-frame Intra-chr q13.1 Atypical:TAF1 Oncogene q13.1 Seq+ 88119 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRA2A-AQP1 TRA2A chr7 23531789 - AQP1 chr7 30922066 + Exonic hg38 CESC TCGA-EK-A2PM-01A 74 177 In-Frame Intra-chr p15.3 p14.3 Seq+ 88120 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC113-CPNE2 CCDC113 chr16 58267586 + CPNE2 chr16 57146085 + Exonic hg38 CESC TCGA-EK-A2PM-01A 6 15 In-Frame Intra-chr q21 q13 Seq+ 88121 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYH11-YME1L1 MYH11 chr16 15726848 - YME1L1 chr10 27149040 - Exonic hg38 CESC TCGA-EK-A2PM-01A 5 6 5'UTR-CDS Inter-chr Oncogene p12.1 Seq+ 88122 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC1-MARCH7 TANC1 chr2 159001189 + 2019_ 3_ 7_ chr2 159729009 + Exonic hg38 CESC TCGA-EK-A2PM-01A 2 6 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 88123 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP4F11-CIB3 CYP4F11 chr19 15934211 - CIB3 chr19 16164913 - Exonic hg38 CESC TCGA-EK-A2PM-01A 1 4 Out-of-frame Intra-chr p13.12 p13.11 88124 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR205HG-RPL14 MIR205HG chr1 209432329 + RPL14 chr3 40462069 + Exonic hg38 CESC TCGA-EK-A2PM-01A 1000 1000 Out-of-frame Inter-chr q32.2 p22.1 88125 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAPOLA-NPAS3 PAPOLA chr14 96502600 + NPAS3 chr14 33676211 + Exonic hg38 CESC TCGA-EK-A2R7-01A 3 8 Out-of-frame Intra-chr q32.2 q13.1 Transcription factor Seq+ 88126 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCM6-RAB3GAP1 MCM6 chr2 135865013 - RAB3GAP1 chr2 135129995 + Exonic hg38 CESC TCGA-EK-A2R7-01A 2 1 In-Frame Intra-chr q21.3 q21.3 Seq+ 88127 ChimerSeq TCGA FAWG TCGA_RNA-Seq ECT2-EGFEM1P ECT2 chr3 172757165 + EGFEM1P chr3 168314071 + Exonic hg38 CESC TCGA-EK-A2R9-01A 27 108 CDS-5'UTR Intra-chr q26.31 Tumor suppressor gene q26.2 Seq+ 88128 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF5A2-PRKCI EIF5A2 chr3 170908543 - PRKCI chr3 170293383 + Exonic hg38 CESC TCGA-EK-A2R9-01A 1 4 5'UTR-CDS Intra-chr q26.2 q26.2 88129 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMO2-CD59 LMO2 chr11 33864602 - CD59 chr11 33722463 - Exonic hg38 CESC TCGA-EK-A2RA-01A 3 5 CDS-5'UTR Intra-chr p13 p13 Seq+ 88130 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR205HG-RPL14 MIR205HG chr1 209432330 + RPL14 chr3 40462064 + Exonic hg38 CESC TCGA-EK-A2RC-01A 1000 1000 Out-of-frame Inter-chr q32.2 p22.1 88131 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP2-FASTKD1 LRP2 chr2 169162472 - FASTKD1 chr2 169531490 - Exonic hg38 CESC TCGA-EK-A2RJ-01A 13 49 In-Frame Intra-chr q31.1 q31.1 Seq+ 88132 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHST8-C19orf24 CHST8 chr19 33689391 + C19orf24 chr19 1278777 + Exonic hg38 CESC TCGA-EK-A2RJ-01A 11 26 Out-of-frame Intra-chr q13.11 p13.3 Seq+ 88133 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPLL-NFATC3 HNRNPLL chr2 38585644 - NFATC3 chr16 68157869 + Exonic hg38 CESC TCGA-EK-A2RJ-01A 6 21 In-Frame Inter-chr p22.1 q22.1 Transcription factor 88134 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACF1-AKIRIN1 MACF1 chr1 39105716 + AKIRIN1 chr1 38998170 + Exonic hg38 CESC TCGA-EK-A2RL-01A 1000 1000 Out-of-frame Intra-chr p34.3 p34.3 Seq+ 88135 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAT5A-YWHAEP7 STAT5A chr17 42290022 + YWHAEP7 chr17 37845379 - Exonic hg38 CESC TCGA-EK-A2RM-01A 18 152 CDS-5'UTR Intra-chr q21.2 Tumor suppressor gene Transcription factor q12 Seq+ 88136 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCMH1-SDCBP2 SCMH1 chr1 41242059 - SDCBP2 chr20 1320435 - Exonic hg38 CESC TCGA-EK-A2RM-01A 13 28 5'UTR-5'UTR Inter-chr p34.2 Transcription factor p13 Seq+ 88137 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIBCH-NEMP2 HIBCH chr2 190319716 - NEMP2 chr2 190525378 - Exonic hg38 CESC TCGA-EK-A2RM-01A 1 3 Out-of-frame Intra-chr q32.2 q32.2 88138 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRD4-NOTCH3 BRD4 chr19 15332290 - NOTCH3 chr19 15162562 - Exonic hg38 CESC TCGA-EK-A3GJ-01A 20 6 5'UTR-CDS Intra-chr p13.12 Atypical:BRD p13.12 Oncogene Tumor suppressor gene Seq+ 88139 ChimerSeq TCGA FAWG TCGA_RNA-Seq VMP1-TUBD1 VMP1 chr17 59817773 + TUBD1 chr17 59866749 - Exonic hg38 CESC TCGA-EK-A3GJ-01A 2 12 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 88140 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTMR12-CDH18 MTMR12 chr5 32239001 - CDH18 chr5 19520778 - Exonic hg38 CESC TCGA-EK-A3GM-01A 2 7 Out-of-frame Intra-chr p13.3 p14.3 Seq+ 88141 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSG2-TTR DSG2 chr18 31498295 + TTR chr18 31592895 + Exonic hg38 CESC TCGA-EK-A3GM-01A 1000 1000 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 88142 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3C2B-KISS1 PIK3C2B chr1 204494356 - KISS1 chr1 204192914 - Exonic hg38 CESC TCGA-EK-A3GN-01A 5 8 5'UTR-5'UTR Intra-chr q32.1 Oncogene q32.1 Tumor suppressor gene 88143 ChimerSeq TCGA FAWG TCGA_RNA-Seq YEATS4-PGAM1P5 YEATS4 chr12 69370975 + PGAM1P5 chr12 95649328 + Exonic hg38 CESC TCGA-EK-A3GN-01A 3 15 CDS-5'UTR Intra-chr q15 q22 Seq+ 88144 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPOCK2-ASCC1 SPOCK2 chr10 72072144 - ASCC1 chr10 72097450 - Exonic hg38 CESC TCGA-EX-A8YF-01A 2 12 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 88145 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDAD1-CXCL9 SDAD1 chr4 75981372 - CXCL9 chr4 76006274 - Exonic hg38 CESC TCGA-FU-A23L-01A 2 9 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 88146 ChimerSeq TCGA FAWG TCGA_RNA-Seq FMO2-MROH9 FMO2 chr1 171205634 + MROH9 chr1 171062132 + Exonic hg38 CESC TCGA-FU-A23L-01A 1 9 In-Frame Intra-chr q24.3 q24.3 88147 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA2-GPX8 ITGA2 chr5 52989532 + GPX8 chr5 55160330 + Exonic hg38 CESC TCGA-FU-A2QG-01A 7 99 5'UTR-5'UTR Intra-chr q11.2 q11.2 Seq+ 88148 ChimerSeq TCGA FAWG TCGA_RNA-Seq FN3K-MYO16 FN3K chr17 82748977 + MYO16 chr13 108883059 + Exonic hg38 CESC TCGA-FU-A3NI-01A 2 7 In-Frame Inter-chr q25.3 Seq+ 88149 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD11-E4F1 ANKRD11 chr16 89490245 - E4F1 chr16 2228372 + Exonic hg38 CESC TCGA-FU-A3TQ-01A 11 13 5'UTR-CDS Intra-chr q24.3 p13.3 Transcription factor Seq+ 88150 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDPK1-UBALD1 PDPK1 chr16 2538136 + UBALD1 chr16 4610555 - Exonic hg38 CESC TCGA-FU-A3TQ-01A 5 16 In-Frame Intra-chr p13.3 p13.3 Seq+ 88151 ChimerSeq TCGA FAWG TCGA_RNA-Seq FDCSP-RGAG1 FDCSP chr4 70231251 + RGAG1 chrX 110419002 + Exonic hg38 CESC TCGA-FU-A3TX-01A 3 145 Out-of-frame Inter-chr q13.3 Seq+ 88152 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP4R1-PAWR PPP4R1 chr18 9570157 - PAWR chr12 79668408 - Exonic hg38 CESC TCGA-FU-A3TX-01A 4 72 3'UTR-CDS Inter-chr p11.22 q21.2 Tumor suppressor gene Seq+ 88153 ChimerSeq TCGA FAWG TCGA_RNA-Seq LONP2-EGLN3 LONP2 chr16 48270274 + EGLN3 chr14 34169646 - Exonic hg38 CESC TCGA-FU-A3TX-01A 2 7 CDS-5'UTR Inter-chr q12.1 q13.1 Tumor suppressor gene Seq+ 88154 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK4-TPH2 DOCK4 chr7 112206102 - TPH2 chr12 71972519 + Exonic hg38 CESC TCGA-FU-A3TX-01A 1 8 Out-of-frame Inter-chr q31.1 q21.1 Seq+ 88155 ChimerSeq TCGA FAWG TCGA_RNA-Seq WHRN-TNC WHRN chr9 114403306 - TNC chr9 115035229 - Exonic hg38 CESC TCGA-FU-A3TX-01A 1000 1000 Out-of-frame Intra-chr q32 q33.1 88156 ChimerSeq TCGA FAWG TCGA_RNA-Seq GABRP-KCNIP1 GABRP chr5 170805853 + KCNIP1 chr5 170718758 + Exonic hg38 CESC TCGA-FU-A40J-01A 5 41 In-Frame Intra-chr q35.1 q35.1 Seq+ 88157 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLEC16A-RMI2 CLEC16A chr16 11126146 + RMI2 chr16 11350642 + Exonic hg38 CESC TCGA-FU-A40J-01A 2 1 In-Frame Intra-chr p13.13 p13.13 Seq+ 88158 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPLOC4-OXLD1 NPLOC4 chr17 81629725 - OXLD1 chr17 81665584 - Exonic hg38 CESC TCGA-FU-A5XV-01A 2 9 In-Frame Intra-chr q25.3 q25.3 Seq+ 88159 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC22A5-RAD50 SLC22A5 chr5 132370365 + RAD50 chr5 132559284 + Exonic hg38 CESC TCGA-FU-A5XV-01A 1 3 In-Frame Intra-chr q31.1 q31.1 Oncogene Seq+ 88160 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABLIM3-TRPM8 ABLIM3 chr5 149142108 + TRPM8 chr2 233926533 + Exonic hg38 CESC TCGA-HM-A3JJ-01A 3 6 CDS-5'UTR Inter-chr q32 q37.1 Seq+ 88161 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAT1-NTRK3 FAT1 chr4 186706563 - NTRK3 chr15 88137561 - Exonic hg38 CESC TCGA-HM-A3JK-01A 1 6 Out-of-frame Inter-chr q35.2 Tumor suppressor gene q25.3 Oncogene Tumor suppressor gene Seq+ 88162 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUDT14-BRF1 NUDT14 chr14 105181129 - BRF1 chr14 105210588 - Exonic hg38 CESC TCGA-HM-A6W2-01A 3 17 Out-of-frame Intra-chr q32.33 q32.33 Tumor suppressor gene Seq+ 88163 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALKBH5-GID4 ALKBH5 chr17 18185013 + GID4 chr17 18058868 + Exonic hg38 CESC TCGA-HM-A6W2-01A 4 5 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 88164 ChimerSeq TCGA FAWG TCGA_RNA-Seq GON4L-ARHGEF2 GON4L chr1 155776395 - ARHGEF2 chr1 155969300 - Exonic hg38 CESC TCGA-HM-A6W2-01A 4 5 In-Frame Intra-chr q22 q22 Seq+ 88165 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGSM2-SRR SGSM2 chr17 2337745 + SRR chr17 2321306 + Exonic hg38 CESC TCGA-HM-A6W2-01A 1 3 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 88166 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFI1-DEPDC5 SFI1 chr22 31618226 + DEPDC5 chr22 31833915 + Exonic hg38 CESC TCGA-HM-A6W2-01A 1 1 Out-of-frame Intra-chr q12.2 q12.2 88167 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAF3IP2-REV3L TRAF3IP2 chr6 111580197 - REV3L chr6 111333367 - Exonic hg38 CESC TCGA-HM-A6W2-01A 1 1 Out-of-frame Intra-chr q21 q21 88168 ChimerSeq TCGA FAWG TCGA_RNA-Seq B2M-PATL2 B2M chr15 44711613 + PATL2 chr15 44676565 - Exonic hg38 CESC TCGA-IR-A3LA-01A 7 69 3'UTR-5'UTR Intra-chr Oncogene q21.1 Seq+ 88169 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPT1A-SYT12 CPT1A chr11 68793315 - SYT12 chr11 67021869 + Exonic hg38 CESC TCGA-IR-A3LA-01A 8 28 CDS-5'UTR Intra-chr q13.3 q13.2 88170 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAND5-GCDH DAND5 chr19 12965193 + GCDH chr19 12896910 + Exonic hg38 CESC TCGA-IR-A3LA-01A 3 5 5'UTR-5'UTR Intra-chr p13.13 p13.13 88171 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE3A-DTWD1 UBE3A chr15 25375465 - DTWD1 chr15 49625113 + Exonic hg38 CESC TCGA-IR-A3LB-01A 11 13 CDS-5'UTR Intra-chr q11.2 q21.2 Seq+ 88172 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13L-IQCD MED13L chr12 116237468 - IQCD chr12 113208259 - Exonic hg38 CESC TCGA-IR-A3LB-01A 1 13 CDS-5'UTR Intra-chr q24.21 q24.13 Seq+ 88173 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP62-TBC1D17 NUP62 chr19 49927694 - TBC1D17 chr19 49882041 + Exonic hg38 CESC TCGA-IR-A3LH-01A 28 129 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 88174 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL4I1-TBC1D17 IL4I1 chr19 49927694 - TBC1D17 chr19 49882041 + Exonic hg38 CESC TCGA-IR-A3LH-01A 28 128 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 88175 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF226-AKT2 ZNF226 chr19 44165807 + AKT2 chr19 40242687 - Exonic hg38 CESC TCGA-IR-A3LH-01A 4 30 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.2 AGC:Akt Oncogene Seq+ 88176 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP2A1-VRK3 AP2A1 chr19 49805576 + VRK3 chr19 49979242 - Exonic hg38 CESC TCGA-IR-A3LH-01A 1 25 Out-of-frame Intra-chr q13.33 q13.33 CK1:VRK Seq+ 88177 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMTK3-NOSIP LMTK3 chr19 48497393 - NOSIP chr19 49560692 - Exonic hg38 CESC TCGA-IR-A3LH-01A 3 7 CDS-5'UTR Intra-chr q13.33 q13.33 Seq+ 88178 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPX2-ID1 TPX2 chr20 31739621 + ID1 chr20 31605372 + Exonic hg38 CESC TCGA-IR-A3LH-01A 3 3 5'UTR-5'UTR Intra-chr q11.21 q11.21 Seq+ 88179 ChimerSeq TCGA FAWG TCGA_RNA-Seq CADM4-ZSCAN18 CADM4 chr19 43639727 - ZSCAN18 chr19 58090386 - Exonic hg38 CESC TCGA-IR-A3LH-01A 1 4 In-Frame Intra-chr q13.31 Tumor suppressor gene q13.43 Transcription factor Seq+ 88180 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPUL1-GNG8 HNRNPUL1 chr19 41281275 + GNG8 chr19 46634204 - Exonic hg38 CESC TCGA-IR-A3LH-01A 1000 1000 In-Frame Intra-chr q13.2 q13.32 88181 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPV4-GIT2 TRPV4 chr12 109792363 - GIT2 chr12 109953234 - Exonic hg38 CESC TCGA-IR-A3LI-01A 6 19 In-Frame Intra-chr q24.11 q24.11 Seq+ 88182 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNAS-GAPDH GNAS chr20 58903791 + GAPDH chr12 6538101 + Exonic hg38 CESC TCGA-IR-A3LI-01A 1 1 Out-of-frame Inter-chr q13.32 Oncogene p13.31 88183 ChimerSeq TCGA FAWG TCGA_RNA-Seq KNL1-LIPC KNL1 chr15 40594392 + LIPC chr15 58563505 + Exonic hg38 CESC TCGA-IR-A3LK-01A 18 549 5'UTR-CDS Intra-chr q15.1 q21.3 88184 ChimerSeq TCGA FAWG TCGA_RNA-Seq WFDC5-SDC4 WFDC5 chr20 45114999 - SDC4 chr20 45333069 - Exonic hg38 CESC TCGA-IR-A3LK-01A 1 20 In-Frame Intra-chr q13.12 q13.12 88185 ChimerSeq TCGA FAWG TCGA_RNA-Seq APIP-SLC1A2 APIP chr11 34888293 - SLC1A2 chr11 35265758 - Exonic hg38 CESC TCGA-IR-A3LK-01A 4 7 In-Frame Intra-chr p13 p13 KB Pub Seq+ 88186 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA3-IZUMO1 PPFIA3 chr19 49119722 + IZUMO1 chr19 48745288 - Exonic hg38 CESC TCGA-IR-A3LK-01A 1 4 5'UTR-5'UTR Intra-chr q13.33 q13.33 Seq+ 88187 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCB1-ITPA PLCB1 chr20 8150371 + ITPA chr20 3213985 + Exonic hg38 CESC TCGA-IR-A3LK-01A 1 2 In-Frame Intra-chr p12.3 p13 88188 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASP8-STRADB CASP8 chr2 201234112 + STRADB chr2 201454746 + Exonic hg38 CESC TCGA-JW-A5VG-01A 1 2 5'UTR-5'UTR Intra-chr q33.1 Oncogene Tumor suppressor gene q33.1 Seq+ 88189 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF227-HNRNPUL1 ZNF227 chr19 44217852 + HNRNPUL1 chr19 41292245 + Exonic hg38 CESC TCGA-JW-A5VI-01A 58 720 In-Frame Intra-chr q13.31 Transcription factor q13.2 Seq+ 88190 ChimerSeq TCGA FAWG TCGA_RNA-Seq HID1-SRP68 HID1 chr17 74972591 - SRP68 chr17 76061574 - Exonic hg38 CESC TCGA-JW-A5VI-01A 8 33 In-Frame Intra-chr q25.1 q25.1 Seq+ 88191 ChimerSeq TCGA FAWG TCGA_RNA-Seq GET4-DNAAF5 GET4 chr7 887519 + DNAAF5 chr7 754589 + Exonic hg38 CESC TCGA-JW-A5VJ-01A 16 104 In-Frame Intra-chr p22.3 p22.3 88192 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERPINB7-SERPINB5 SERPINB7 chr18 63782540 + SERPINB5 chr18 63484422 + Exonic hg38 CESC TCGA-JW-A5VJ-01A 6 33 CDS-5'UTR Intra-chr q21.33 q21.33 Tumor suppressor gene 88193 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDHX-STK32B PDHX chr11 34931484 + STK32B chr4 5416845 + Exonic hg38 CESC TCGA-JW-A5VJ-01A 6 20 In-Frame Inter-chr p13 p16.2 Seq+ 88194 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP5C-HIF3A PPP5C chr19 46376574 + HIF3A chr19 46334905 + Exonic hg38 CESC TCGA-JW-A5VJ-01A 2 7 In-Frame Intra-chr q13.32 q13.32 Transcription factor Seq+ 88195 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASAL1-DDX54 RASAL1 chr12 113108085 - DDX54 chr12 113179026 - Exonic hg38 CESC TCGA-JW-A5VJ-01A 1 9 In-Frame Intra-chr q24.13 Tumor suppressor gene q24.13 Seq+ 88196 ChimerSeq TCGA FAWG TCGA_RNA-Seq YY1-EVL YY1 chr14 100262466 + EVL chr14 100097481 + Exonic hg38 CESC TCGA-JW-A5VJ-01A 1 9 Out-of-frame Intra-chr q32.2 Transcription factor q32.2 88197 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYLIP-GMPR MYLIP chr6 16143864 + GMPR chr6 16278785 + Exonic hg38 CESC TCGA-JW-A69B-01A 8 34 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 88198 ChimerSeq TCGA FAWG TCGA_RNA-Seq ILF3-AP1M2 ILF3 chr19 10671535 + AP1M2 chr19 10578963 - Exonic hg38 CESC TCGA-JW-A852-01A 2 5 In-Frame Intra-chr p13.2 p13.2 Seq+ 88199 ChimerSeq TCGA FAWG TCGA_RNA-Seq SASH1-PACRG SASH1 chr6 148390262 + PACRG chr6 163089259 + Exonic hg38 CESC TCGA-JW-AAVH-01A 5 7 Out-of-frame Intra-chr q24.3 Tumor suppressor gene q26 Tumor suppressor gene Seq+ 88200 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3GLB1-CLCA1 SH3GLB1 chr1 86715865 + CLCA1 chr1 86469021 + Exonic hg38 CESC TCGA-JX-A3PZ-01A 18 48 CDS-3'UTR Intra-chr p22.3 Tumor suppressor gene p22.3 Seq+ 88201 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKS6-STX17 ANKS6 chr9 98796133 - STX17 chr9 99915178 + Exonic hg38 CESC TCGA-JX-A3Q8-01A 1 6 CDS-5'UTR Intra-chr q22.33 q31.1 Seq+ 88202 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL3-GRIK4 BCL3 chr19 44749046 + GRIK4 chr11 120815378 + Exonic hg38 CESC TCGA-JX-A5QV-01A 7 14 In-Frame Inter-chr q13.32 Oncogene q23.3 Seq+ 88203 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC2A1-P3H1 SLC2A1 chr1 42943226 - P3H1 chr1 42762475 - Exonic hg38 CESC TCGA-JX-A5QV-01A 5 7 In-Frame Intra-chr p34.2 p34.2 88204 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFX2-PATL1 RFX2 chr19 6039980 - PATL1 chr11 59638411 - Exonic hg38 CESC TCGA-LP-A4AW-01A 2 1 Out-of-frame Inter-chr p13.3 Transcription factor q12.1 Seq+ 88205 ChimerSeq TCGA FAWG TCGA_RNA-Seq HEG1-YAP1 HEG1 chr3 124990787 - YAP1 chr11 102186018 + Exonic hg38 CESC TCGA-LP-A4AX-01A 1 2 In-Frame Inter-chr q21.2 q22.1 Tumor suppressor gene 88206 ChimerSeq TCGA FAWG TCGA_RNA-Seq KPNA1-CHRNA9 KPNA1 chr3 122514757 - CHRNA9 chr4 40348882 + Exonic hg38 CESC TCGA-LP-A5U2-01A 7 33 5'UTR-CDS Inter-chr q21.1 p14 Seq+ 88207 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA3-ARHGAP26 NCOA3 chr20 47628023 + ARHGAP26 chr5 143222358 + Exonic hg38 CESC TCGA-LP-A5U3-01A 20 63 In-Frame Inter-chr q13.12 Transcription factor q31.3 Seq+ 88208 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPX2-COX4I2 TPX2 chr20 31739621 + COX4I2 chr20 31644768 + Exonic hg38 CESC TCGA-LP-A7HU-01A 17 128 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 88209 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCEH1-BCL2L1 NCEH1 chr3 172710847 - BCL2L1 chr20 31666086 - Exonic hg38 CESC TCGA-LP-A7HU-01A 4 14 In-Frame Inter-chr q26.31 q11.21 Oncogene Seq+ 88210 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC22A5-C5orf56 SLC22A5 chr5 132378584 + C5orf56 chr5 132486557 + Exonic hg38 CESC TCGA-MA-AA3W-01A 3 42 Out-of-frame Intra-chr q31.1 q31.1 88211 ChimerSeq TCGA FAWG TCGA_RNA-Seq UQCRC1-IP6K2 UQCRC1 chr3 48605770 - IP6K2 chr3 48729777 - Exonic hg38 CESC TCGA-MA-AA3W-01A 3 6 CDS-5'UTR Intra-chr p21.31 p21.31 88212 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV6-MACROD2 ETV6 chr12 11752579 + MACROD2 chr20 14849904 + Exonic hg38 CESC TCGA-MA-AA3X-01A 2 7 CDS-5'UTR Inter-chr p13.2 Tumor suppressor gene Transcription factor p12.1 Seq+ 88213 ChimerSeq TCGA FAWG TCGA_RNA-Seq HAS3-SNTB2 HAS3 chr16 69113542 + SNTB2 chr16 69260050 + Exonic hg38 CESC TCGA-MA-AA3Y-01A 1 7 Out-of-frame Intra-chr q22.1 88214 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP62-AP2A1 NUP62 chr19 49927694 - AP2A1 chr19 49801390 + Exonic hg38 CESC TCGA-MA-AA3Z-01A 1 26 5'UTR-CDS Intra-chr q13.33 q13.33 88215 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLEC16A-LITAF CLEC16A chr16 11061022 + LITAF chr16 11556735 - Exonic hg38 CESC TCGA-MA-AA3Z-01A 1 17 CDS-5'UTR Intra-chr p13.13 p13.13 Tumor suppressor gene Seq+ 88216 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL4I1-AP2A1 IL4I1 chr19 49927694 - AP2A1 chr19 49801390 + Exonic hg38 CESC TCGA-MA-AA3Z-01A 1 6 5'UTR-CDS Intra-chr q13.33 q13.33 88217 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0907-CD276 KIAA0907 chr1 155917499 - CD276 chr15 73709648 + Exonic hg38 CESC TCGA-MA-AA41-01A 4 23 Out-of-frame Inter-chr q22 q24.1 Seq+ 88218 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUMO2-KCTD2 SUMO2 chr17 75174752 - KCTD2 chr17 75034033 + Exonic hg38 CESC TCGA-MA-AA41-01A 2 23 CDS-5'UTR Intra-chr q25.1 q25.1 88219 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2K1-LCE1C MAP2K1 chr15 66485191 + LCE1C chr1 152805498 - Exonic hg38 CESC TCGA-MA-AA41-01A 2 3 CDS-5'UTR Inter-chr q22.31 STE:STE7 Oncogene q21.3 Seq+ 88220 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED24-MIEN1 MED24 chr17 40019925 - MIEN1 chr17 39730533 - Exonic hg38 CESC TCGA-MA-AA43-01A 91 1 Out-of-frame Intra-chr q21.1 q12 Seq+ 88221 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCY2-CASC3 ADCY2 chr5 7414770 + CASC3 chr17 40161753 + Exonic hg38 CESC TCGA-MA-AA43-01A 7 8 In-Frame Inter-chr p15.31 q21.1 Seq+ 88222 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK3-LRRC69 STK3 chr8 98526742 - LRRC69 chr8 91218890 + Exonic hg38 CESC TCGA-MA-AA43-01A 3 5 In-Frame Intra-chr q22.2 q21.3 Seq+ 88223 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASC3-ADCY2 CASC3 chr17 40166861 + ADCY2 chr5 7414573 + Exonic hg38 CESC TCGA-MA-AA43-01A 1 4 In-Frame Inter-chr q21.1 p15.31 88224 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNND1-SLC22A10 CTNND1 chr11 57762046 + SLC22A10 chr11 63166863 + Exonic hg38 CESC TCGA-MU-A51Y-01A 4 35 5'UTR-5'UTR Intra-chr q12.1 Tumor suppressor gene q12.3 Seq+ 88225 ChimerSeq TCGA FAWG TCGA_RNA-Seq MELK-MS4A12 MELK chr9 36607673 + MS4A12 chr11 60497313 + Exonic hg38 CESC TCGA-MU-A5YI-01A 23 54 5'UTR-5'UTR Inter-chr p13.2 CAMK:CAMKL q12.2 Seq+ 88226 ChimerSeq TCGA FAWG TCGA_RNA-Seq JAG1-SLX4IP JAG1 chr20 10641460 - SLX4IP chr20 10601731 + Exonic hg38 CESC TCGA-MY-A5BE-01A 2 5 Out-of-frame Intra-chr p12.2 p12.2 Seq+ 88227 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYT7-SDHAF2 SYT7 chr11 61523075 - SDHAF2 chr11 61445941 + Exonic hg38 CESC TCGA-MY-A5BF-01A 13 88 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 88228 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCUN1D5-WTAPP1 DCUN1D5 chr11 103083256 - WTAPP1 chr11 102798024 + Exonic hg38 CESC TCGA-MY-A913-01A 6 49 CDS-5'UTR Intra-chr q22.3 q22.2 Seq+ 88229 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNC2H1-CEP126 DYNC2H1 chr11 103358359 + CEP126 chr11 101992778 + Exonic hg38 CESC TCGA-MY-A913-01A 1 3 Out-of-frame Intra-chr q22.3 q22.1 88230 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNC2H1-MMP1 DYNC2H1 chr11 103170290 + MMP1 chr11 102795291 - Exonic hg38 CESC TCGA-MY-A913-01A 1 3 Out-of-frame Intra-chr q22.3 q22.2 88231 ChimerSeq TCGA FAWG TCGA_RNA-Seq MMP1-DCUN1D5 MMP1 chr11 102798066 - DCUN1D5 chr11 103089306 - Exonic hg38 CESC TCGA-MY-A913-01A 1000 1000 Out-of-frame Intra-chr q22.2 q22.3 88232 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLGRKT-JAK2 PLGRKT chr9 5431897 - JAK2 chr9 5123004 + Exonic hg38 CESC TCGA-PN-A8MA-01A 24 258 Out-of-frame Intra-chr p24.1 p24.1 TK:JakA Oncogene Seq+ 88233 ChimerSeq TCGA FAWG TCGA_RNA-Seq JAK2-RCL1 JAK2 chr9 5090911 + RCL1 chr9 4834141 + Exonic hg38 CESC TCGA-PN-A8MA-01A 7 46 Out-of-frame Intra-chr p24.1 TK:JakA Oncogene p24.1 Seq+ 88234 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP35-SAE1 ARHGAP35 chr19 46922356 + SAE1 chr19 47169818 + Exonic hg38 CESC TCGA-Q1-A5R2-01A 2 20 In-Frame Intra-chr q13.32 Transcription factor q13.32 Seq+ 88235 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED23-ANO2 MED23 chr6 131587709 - ANO2 chr12 5732630 - Exonic hg38 CESC TCGA-Q1-A5R2-01A 3 14 In-Frame Inter-chr q23.2 p13.31 Seq+ 88236 ChimerSeq TCGA FAWG TCGA_RNA-Seq PATJ-DYNC2H1 PATJ chr1 62017947 + DYNC2H1 chr11 103280348 + Exonic hg38 CESC TCGA-Q1-A6DT-01A 55 257 Out-of-frame Inter-chr p31.3 q22.3 88237 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC16A10-NME7 SLC16A10 chr6 111177665 + NME7 chr1 169132817 - Exonic hg38 CESC TCGA-Q1-A6DT-01A 24 151 In-Frame Inter-chr q21 q24.2 Seq+ 88238 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2V2-MCM4 UBE2V2 chr8 48008470 + MCM4 chr8 47967365 + Exonic hg38 CESC TCGA-Q1-A6DT-01A 13 3 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 88239 ChimerSeq TCGA FAWG TCGA_RNA-Seq CADPS2-RPGR CADPS2 chr7 122438341 - RPGR chrX 38291484 - Exonic hg38 CESC TCGA-Q1-A6DW-01A 1 7 In-Frame Inter-chr q31.32 p11.4 Seq+ 88240 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTLL10-CTAG2 TTLL10 chr1 1185109 + CTAG2 chrX 154652267 - Exonic hg38 CESC TCGA-Q1-A73P-01A 7 37 Out-of-frame Inter-chr p36.33 q28 Seq+ 88241 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-PPP1R1B ERBB2 chr17 39727547 + PPP1R1B chr17 39635607 + Exonic hg38 CESC TCGA-Q1-A73R-01A 4508 19965 In-Frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 88242 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1807220 + TACC3 chr4 1740894 + Exonic hg38 CESC TCGA-Q1-A73R-01A 6 16 Out-of-frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 88243 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGAP3-PNMT PGAP3 chr17 39687834 - PNMT chr17 39669629 + Exonic hg38 CESC TCGA-Q1-A73R-01A 1 33 In-Frame Intra-chr q12 Oncogene q12 88244 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF395-PBK ZNF395 chr8 28385080 - PBK chr8 27811134 - Exonic hg38 CESC TCGA-Q1-A73S-01A 1 4 5'UTR-CDS Intra-chr p21.1 Transcription factor p21.1 Other:TOPK 88245 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCEA1-MTSS1 TCEA1 chr8 53993668 - MTSS1 chr8 124704191 - Exonic hg38 CESC TCGA-R2-A69V-01A 1 3 Out-of-frame Intra-chr q11.23 q24.13 Tumor suppressor gene 88246 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKLE2-POLE ANKLE2 chr12 132747832 - POLE chr12 132632795 - Exonic hg38 CESC TCGA-R2-A69V-01A 1 1 Out-of-frame Intra-chr q24.33 q24.33 88247 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM2A-PGA3 KDM2A chr11 67256289 + PGA3 chr11 61208398 + Exonic hg38 CESC TCGA-RA-A741-01A 7 8 Out-of-frame Intra-chr q13.2 Transcription factor q12.2 Seq+ 88248 ChimerSeq TCGA FAWG TCGA_RNA-Seq YAP1-SS18 YAP1 chr11 102111169 + SS18 chr18 26087577 - Exonic hg38 CESC TCGA-RA-A741-01A 3 5 In-Frame Inter-chr q22.1 Tumor suppressor gene q11.2 Seq+ 88249 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL1A-MRPL11 OSBPL1A chr18 24271622 - MRPL11 chr11 66438259 - Exonic hg38 CESC TCGA-RA-A741-01A 1 3 5'UTR-CDS Inter-chr q11.2 q13.2 88250 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGRN-BAD AGRN chr1 1022462 + BAD chr11 64271803 - Exonic hg38 CESC TCGA-UC-A7PD-01A 22 101 In-Frame Inter-chr p36.33 q13.1 Seq+ 88251 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALY-SLC24A3 RALY chr20 33994131 + SLC24A3 chr20 19580000 + Exonic hg38 CESC TCGA-UC-A7PF-01A 2 13 5'UTR-CDS Intra-chr q11.22 p11.23 Seq+ 88252 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC1A5-AP2A1 SLC1A5 chr19 46782383 - AP2A1 chr19 49781757 + Exonic hg38 CESC TCGA-UC-A7PG-01A 3 4 Out-of-frame Intra-chr q13.32 q13.33 Seq+ 88253 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK1E-PLA2G6 CSNK1E chr22 38293255 - PLA2G6 chr22 38116211 - Exonic hg38 CESC TCGA-VS-A8EC-01A 9 26 3'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 88254 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHISA5-IP6K2 SHISA5 chr3 48501137 - IP6K2 chr3 48695418 - Exonic hg38 CESC TCGA-VS-A8EC-01A 9 25 In-Frame Intra-chr p21.31 p21.31 Seq+ 88255 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP20A1-CCDC178 CYP20A1 chr2 203252109 + CCDC178 chr18 33215695 - Exonic hg38 CESC TCGA-VS-A8EC-01A 7 16 In-Frame Inter-chr q33.2 q12.1 Seq+ 88256 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC42EP2-MRPL49 CDC42EP2 chr11 65314954 + MRPL49 chr11 65125488 + Exonic hg38 CESC TCGA-VS-A8EC-01A 6 17 5'UTR-5'UTR Intra-chr q13.1 q13.1 Seq+ 88257 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFC1-EHBP1 RFC1 chr4 39342345 - EHBP1 chr2 62942718 + Exonic hg38 CESC TCGA-VS-A8EC-01A 2 6 Out-of-frame Inter-chr p14 p15 Seq+ 88258 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL3-CEACAM16 BCL3 chr19 44756340 + CEACAM16 chr19 44701361 + Exonic hg38 CESC TCGA-VS-A8EC-01A 2 4 CDS-5'UTR Intra-chr q13.32 Oncogene q13.31 Seq+ 88259 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC7B-CCDC88C TTC7B chr14 90780738 - CCDC88C chr14 91416838 - Exonic hg38 CESC TCGA-VS-A8EC-01A 2 3 Out-of-frame Intra-chr q32.11 q32.12 Seq+ 88260 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFHX3-IL34 ZFHX3 chr16 72950469 - IL34 chr16 70646548 + Exonic hg38 CESC TCGA-VS-A8EC-01A 1 6 CDS-5'UTR Intra-chr q22.3 Tumor suppressor gene Transcription factor q22.1 Seq+ 88261 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDPCP-SERTAD2 WDPCP chr2 63437421 - SERTAD2 chr2 64636875 - Exonic hg38 CESC TCGA-VS-A8EC-01A 1 2 CDS-5'UTR Intra-chr p15 p14 Seq+ 88262 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB30-AQP11 RAB30 chr11 83071691 - AQP11 chr11 77603556 + Exonic hg38 CESC TCGA-VS-A8EH-01A 6 34 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 88263 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGO2-AOX3P SGO2 chr2 200542664 + AOX3P chr2 200699931 + Exonic hg38 CESC TCGA-VS-A8EI-01A 9 55 Out-of-frame Intra-chr q33.1 q33.1 88264 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFS4-GZMA NDUFS4 chr5 53658624 + GZMA chr5 55105474 + Exonic hg38 CESC TCGA-VS-A8EI-01A 1 15 In-Frame Intra-chr q11.2 q11.2 Seq+ 88265 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNC3-PRKDC KCNC3 chr19 50320593 - PRKDC chr8 47817561 - Exonic hg38 CESC TCGA-VS-A8EI-01A 3 3 In-Frame Inter-chr q13.33 q11.21 Oncogene Seq+ 88266 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA2-PARP8 ITGA2 chr5 52989532 + PARP8 chr5 50759643 + Exonic hg38 CESC TCGA-VS-A8EI-01A 2 5 In-Frame Intra-chr q11.2 q11.1 Seq+ 88267 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13-BAHCC1 MED13 chr17 62065140 - BAHCC1 chr17 81463611 + Exonic hg38 CESC TCGA-VS-A8EJ-01A 65 265 In-Frame Intra-chr q23.2 q25.3 Seq+ 88268 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSH2-RUNDC3A SSH2 chr17 29695459 - RUNDC3A chr17 44316385 + Exonic hg38 CESC TCGA-VS-A8EJ-01A 25 69 Out-of-frame Intra-chr q11.2 q21.31 Seq+ 88269 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF2P1-SSH2 SMURF2P1 chr17 30600916 + SSH2 chr17 29703062 - Exonic hg38 CESC TCGA-VS-A8EJ-01A 17 33 Out-of-frame Intra-chr q11.2 q11.2 88270 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM37-MED13 TRIM37 chr17 59070823 - MED13 chr17 62052705 - Exonic hg38 CESC TCGA-VS-A8EJ-01A 6 73 Out-of-frame Intra-chr q22 q23.2 Seq+ 88271 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNC1-SKAP1 PITPNC1 chr17 67378202 + SKAP1 chr17 48170659 - Exonic hg38 CESC TCGA-VS-A8EJ-01A 10 32 Out-of-frame Intra-chr q24.2 q21.32 Seq+ 88272 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACBD4-LRRC37A ACBD4 chr17 45139160 + LRRC37A chr17 46335545 + Exonic hg38 CESC TCGA-VS-A8EJ-01A 9 12 CDS-3'UTR Intra-chr q21.31 Seq+ 88273 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUZ12P1-C17orf64 SUZ12P1 chr17 30709811 + C17orf64 chr17 60425783 + Exonic hg38 CESC TCGA-VS-A8EJ-01A 4 20 5'UTR-CDS Intra-chr q11.2 q23.2 Seq+ 88274 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0100-CRHR1 KIAA0100 chr17 28643610 - CRHR1 chr17 45807010 + Exonic hg38 CESC TCGA-VS-A8EJ-01A 5 9 CDS-3'UTR Intra-chr q11.2 q21.31 Seq+ 88275 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEFSEC-PPP2R3A EEFSEC chr3 128264781 + PPP2R3A chr3 136145043 + Exonic hg38 CESC TCGA-VS-A8EJ-01A 2 3 3'UTR-CDS Intra-chr q21.3 q22.2 Seq+ 88276 ChimerSeq TCGA FAWG TCGA_RNA-Seq C17orf67-CUEDC1 C17orf67 chr17 56814869 - CUEDC1 chr17 57885879 - Exonic hg38 CESC TCGA-VS-A8EJ-01A 1 6 CDS-5'UTR Intra-chr q22 q22 Seq+ 88277 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELMSAN1-ZFYVE1 ELMSAN1 chr14 73759763 - ZFYVE1 chr14 72998315 - Exonic hg38 CESC TCGA-VS-A8EJ-01A 1 6 5'UTR-CDS Intra-chr q24.3 q24.2 88278 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO18A-RARA MYO18A chr17 29180313 - RARA chr17 40348316 + Exonic hg38 CESC TCGA-VS-A8EJ-01A 1 5 5'UTR-CDS Intra-chr q11.2 Oncogene q21.2 Oncogene Transcription factor 88279 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1D-PLXDC1 MYO1D chr17 32653843 - PLXDC1 chr17 39067959 - Exonic hg38 CESC TCGA-VS-A8EJ-01A 1 2 In-Frame Intra-chr q11.2 q12 Seq+ 88280 ChimerSeq TCGA FAWG TCGA_RNA-Seq NARF-HEXDC NARF chr17 82468896 + HEXDC chr17 82439631 + Exonic hg38 CESC TCGA-VS-A8EK-01A 14 37 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 88281 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK2-ANKUB1 PAK2 chr3 196820567 + ANKUB1 chr3 149851326 - Exonic hg38 CESC TCGA-VS-A8EK-01A 5 24 CDS-5'UTR Intra-chr q29 STE:STE20 q25.1 88282 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARP8-KIF6 PARP8 chr5 50826803 + KIF6 chr6 39691862 - Exonic hg38 CESC TCGA-VS-A8EK-01A 4 8 Out-of-frame Inter-chr q11.1 p21.2 88283 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPV4-GIT2 TRPV4 chr12 109833350 - GIT2 chr12 109961685 - Exonic hg38 CESC TCGA-VS-A8EL-01A 1 1 5'UTR-CDS Intra-chr q24.11 q24.11 Seq+ 88284 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLAUR-SMG9 PLAUR chr19 43667581 - SMG9 chr19 43750747 - Exonic hg38 CESC TCGA-VS-A8Q8-01A 10 30 CDS-5'UTR Intra-chr q13.31 q13.31 Seq+ 88285 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDLR-CALR LDLR chr19 11116998 + CALR chr19 12939134 + Exonic hg38 CESC TCGA-VS-A8Q9-01A 17 29 Out-of-frame Intra-chr p13.2 p13.13 Seq+ 88286 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF700-TEX101 ZNF700 chr19 11925273 + TEX101 chr19 43415881 + Exonic hg38 CESC TCGA-VS-A8Q9-01A 6 47 In-Frame Intra-chr p13.2 Transcription factor q13.31 Seq+ 88287 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOOK2-GADD45GIP1 HOOK2 chr19 12792324 - GADD45GIP1 chr19 12954526 - Exonic hg38 CESC TCGA-VS-A8Q9-01A 5 25 5'UTR-CDS Intra-chr p13.13 p13.13 Tumor suppressor gene 88288 ChimerSeq TCGA FAWG TCGA_RNA-Seq CALR-ZNF799 CALR chr19 12940887 + ZNF799 chr19 12393423 - Exonic hg38 CESC TCGA-VS-A8Q9-01A 3 19 In-Frame Intra-chr p13.13 p13.2 Transcription factor Seq+ 88289 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP5C-GADD45GIP1 PPP5C chr19 46376574 + GADD45GIP1 chr19 12954526 - Exonic hg38 CESC TCGA-VS-A8Q9-01A 2 9 Out-of-frame Intra-chr q13.32 p13.13 Tumor suppressor gene Seq+ 88290 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN13-C4orf36 PTPN13 chr4 86735746 + C4orf36 chr4 86876443 - Exonic hg38 CESC TCGA-VS-A8QC-01A 94 197 CDS-3'UTR Intra-chr q21.3 Tumor suppressor gene q21.3 Seq+ 88291 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO42-EPHA2 FBXO42 chr1 16305803 - EPHA2 chr1 16125320 - Exonic hg38 CESC TCGA-VS-A8QC-01A 13 18 Out-of-frame Intra-chr p36.13 p36.13 Tumor suppressor gene Seq+ 88292 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCA5-MBTD1 ABCA5 chr17 69294655 - MBTD1 chr17 51180694 - Exonic hg38 CESC TCGA-VS-A8QC-01A 5 10 In-Frame Intra-chr q24.3 q21.33 Seq+ 88293 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCM3-PKHD1 MCM3 chr6 52283294 - PKHD1 chr6 52053251 - Exonic hg38 CESC TCGA-VS-A8QC-01A 4 2 In-Frame Intra-chr p12.2 p12.2 Oncogene Seq+ 88294 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHBDL2-AHCYL2 RHBDL2 chr1 38941682 - AHCYL2 chr7 129422840 + Exonic hg38 CESC TCGA-VS-A8QF-01A 6 42 5'UTR-CDS Inter-chr p34.3 q32.1 Seq+ 88295 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSPA14-C10orf67 HSPA14 chr10 14849811 + C10orf67 chr10 23204255 - Exonic hg38 CESC TCGA-VS-A8QF-01A 3 15 Out-of-frame Intra-chr p13 p12.2 88296 ChimerSeq TCGA FAWG TCGA_RNA-Seq THSD4-REC114 THSD4 chr15 71411823 + REC114 chr15 73550938 + Exonic hg38 CESC TCGA-VS-A8QF-01A 2 14 In-Frame Intra-chr q23 q24.1 88297 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBCA-WDR41 TBCA chr5 77708242 - WDR41 chr5 77540536 - Exonic hg38 CESC TCGA-VS-A8QF-01A 2 5 CDS-5'UTR Intra-chr q14.1 q14.1 88298 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPIDR-DNAJC5B SPIDR chr8 47294030 + DNAJC5B chr8 66043488 + Exonic hg38 CESC TCGA-VS-A94W-01A 4 9 5'UTR-5'UTR Intra-chr q11.21 q13.1 88299 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSKH1-TSNAXIP1 PSKH1 chr16 67909706 + TSNAXIP1 chr16 67821099 + Exonic hg38 CESC TCGA-VS-A94X-01A 1 22 In-Frame Intra-chr q22.1 CAMK:PSK q22.1 Seq+ 88300 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNS-TBC1D30 GNS chr12 64744809 - TBC1D30 chr12 64818456 + Exonic hg38 CESC TCGA-VS-A94Y-01A 40 249 CDS-5'UTR Intra-chr q14.3 q14.3 88301 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR35-HS1BP3 WDR35 chr2 19951744 - HS1BP3 chr2 20634973 - Exonic hg38 CESC TCGA-VS-A94Y-01A 3 2 Out-of-frame Intra-chr p24.1 p24.1 88302 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHEK2-LARGE1 CHEK2 chr22 28694032 - LARGE1 chr22 33650668 - Exonic hg38 CESC TCGA-VS-A94Y-01A 1 1 Out-of-frame Intra-chr q12.1 Oncogene Tumor suppressor gene q12.3 88303 ChimerSeq TCGA FAWG TCGA_RNA-Seq PI4KB-SELENBP1 PI4KB chr1 151315573 - SELENBP1 chr1 151372698 - Exonic hg38 CESC TCGA-VS-A950-01A 40 215 CDS-5'UTR Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 88304 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTA2-UBXN1 MTA2 chr11 62597316 - UBXN1 chr11 62678952 - Exonic hg38 CESC TCGA-VS-A952-01A 9 27 CDS-5'UTR Intra-chr q12.3 q12.3 Seq+ 88305 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELMSAN1-NUMB ELMSAN1 chr14 73736998 - NUMB chr14 73459305 - Exonic hg38 CESC TCGA-VS-A953-01A 29 93 CDS-5'UTR Intra-chr q24.3 q24.3 Tumor suppressor gene Seq+ 88306 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC6B-PCCB EXOC6B chr2 72825798 - PCCB chr3 136326803 + Exonic hg38 CESC TCGA-VS-A953-01A 17 35 Out-of-frame Inter-chr p13.2 q22.3 Seq+ 88307 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH13-TXNDC11 CDH13 chr16 82627137 + TXNDC11 chr16 11692082 - Exonic hg38 CESC TCGA-VS-A953-01A 2 69 In-Frame Intra-chr q23.3 Tumor suppressor gene p13.13 Seq+ 88308 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRADD-SMOX TRADD chr16 67154456 - SMOX chr20 4120980 + Exonic hg38 CESC TCGA-VS-A953-01A 3 4 Out-of-frame Inter-chr q22.1 p13 88309 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP2-KCNJ10 SRGAP2 chr1 206437042 + KCNJ10 chr1 160042532 - Exonic hg38 CESC TCGA-VS-A957-01A 1 2 CDS-5'UTR Intra-chr q32.1 Tumor suppressor gene q23.2 Seq+ 88310 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE3C-C1D UBE3C chr7 157184029 + C1D chr2 68047319 - Exonic hg38 CESC TCGA-VS-A959-01A 5 27 CDS-5'UTR Inter-chr q36.3 p14 Seq+ 88311 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSKH1-PSMB10 PSKH1 chr16 67927764 + PSMB10 chr16 67935437 - Exonic hg38 CESC TCGA-VS-A959-01A 3 9 Out-of-frame Intra-chr q22.1 CAMK:PSK q22.1 88312 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL7A-WDR66 BCL7A chr12 122044053 + WDR66 chr12 122003652 + Exonic hg38 CESC TCGA-VS-A9U5-01A 2 2 3'UTR-CDS Intra-chr q24.31 Seq+ 88313 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCHSD1-NCKAP1L FCHSD1 chr5 141650359 - NCKAP1L chr12 54542575 + Exonic hg38 CESC TCGA-VS-A9U7-01A 39 110 In-Frame Inter-chr q31.3 q13.13 Seq+ 88314 ChimerSeq TCGA FAWG TCGA_RNA-Seq RLN2-CD274 RLN2 chr9 5304370 - CD274 chr9 5462834 + Exonic hg38 CESC TCGA-VS-A9U7-01A 1 3 In-Frame Intra-chr p24.1 p24.1 Oncogene 88315 ChimerSeq TCGA FAWG TCGA_RNA-Seq OAS1-RPH3A OAS1 chr12 112911235 + RPH3A chr12 112869759 + Exonic hg38 CESC TCGA-VS-A9UB-01A 2 8 Out-of-frame Intra-chr q24.13 q24.13 Seq+ 88316 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806934 + TACC3 chr4 1739702 + Exonic hg38 CESC TCGA-VS-A9UD-01A 103 210 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 88317 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC35G2-IL20RB SLC35G2 chr3 136819628 + IL20RB chr3 136980466 + Exonic hg38 CESC TCGA-VS-A9UH-01A 1 6 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 88318 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL1A2-HSPA8 COL1A2 chr7 94429430 + HSPA8 chr11 123061258 - Exonic hg38 CESC TCGA-VS-A9UH-01A 1 1 Out-of-frame Inter-chr q21.3 q24.1 88319 ChimerSeq TCGA FAWG TCGA_RNA-Seq MMP12-WTAPP1 MMP12 chr11 102866315 - WTAPP1 chr11 102830732 + Exonic hg38 CESC TCGA-VS-A9UO-01A 162 722 CDS-5'UTR Intra-chr q22.2 q22.2 Seq+ 88320 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD1-BBOX1 BTBD1 chr15 83041728 - BBOX1 chr11 27093168 + Exonic hg38 CESC TCGA-VS-A9UO-01A 80 210 In-Frame Inter-chr q25.2 p14.2 Seq+ 88321 ChimerSeq TCGA FAWG TCGA_RNA-Seq WTAPP1-MMP12 WTAPP1 chr11 102832906 + MMP12 chr11 102868069 - Exonic hg38 CESC TCGA-VS-A9UO-01A 9 29 5'UTR-CDS Intra-chr q22.2 q22.2 88322 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP3-ITPR1 SRGAP3 chr3 8990512 - ITPR1 chr3 4766530 + Exonic hg38 CESC TCGA-VS-A9UO-01A 4 10 In-Frame Intra-chr p25.3 Tumor suppressor gene p26.1 Seq+ 88323 ChimerSeq TCGA FAWG TCGA_RNA-Seq FANCM-PRPF39 FANCM chr14 45196547 + PRPF39 chr14 45107451 + Exonic hg38 CESC TCGA-VS-A9UO-01A 4 7 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 88324 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNRNP40-COL6A5 SNRNP40 chr1 31281374 - COL6A5 chr3 130468795 + Exonic hg38 CESC TCGA-VS-A9UO-01A 1 6 Out-of-frame Inter-chr p35.2 q22.1 Seq+ 88325 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAT3-KAT2A STAT3 chr17 42348389 - KAT2A chr17 42120829 - Exonic hg38 CESC TCGA-VS-A9UP-01A 28 170 Out-of-frame Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q21.2 Seq+ 88326 ChimerSeq TCGA FAWG TCGA_RNA-Seq PQLC1-RBFADN PQLC1 chr18 79950724 - RBFADN chr18 80079687 + Exonic hg38 CESC TCGA-VS-A9UP-01A 7 19 Out-of-frame Intra-chr q23 q23 Seq+ 88327 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMA6-SNX6 PSMA6 chr14 35292552 + SNX6 chr14 34603471 - Exonic hg38 CESC TCGA-VS-A9UP-01A 1 26 Out-of-frame Intra-chr q13.2 q13.1 88328 ChimerSeq TCGA FAWG TCGA_RNA-Seq MMD-APPBP2 MMD chr17 55421670 - APPBP2 chr17 60466459 - Exonic hg38 CESC TCGA-VS-A9UP-01A 5 6 In-Frame Intra-chr q22 q23.2 Seq+ 88329 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC18-ARID1A ZDHHC18 chr1 26827139 + ARID1A chr1 26772500 + Exonic hg38 CESC TCGA-VS-A9UP-01A 2 13 Out-of-frame Intra-chr p36.11 p36.11 Oncogene Tumor suppressor gene 88330 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPX2-DEFB118 TPX2 chr20 31739621 + DEFB118 chr20 31372857 + Exonic hg38 CESC TCGA-VS-A9UP-01A 2 8 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 88331 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXW11-KCNIP1 FBXW11 chr5 172006458 - KCNIP1 chr5 170718758 + Exonic hg38 CESC TCGA-VS-A9UT-01A 31 85 Out-of-frame Intra-chr q35.1 q35.1 Seq+ 88332 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R15A-EMP3 PPP1R15A chr19 48874898 + EMP3 chr19 48321814 + Exonic hg38 CESC TCGA-VS-A9UT-01A 10 77 CDS-5'UTR Intra-chr q13.33 q13.33 Seq+ 88333 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFX3-DDAH2 RFX3 chr9 3525747 - DDAH2 chr6 31728745 - Exonic hg38 CESC TCGA-VS-A9UT-01A 11 34 5'UTR-5'UTR Inter-chr p24.2 Transcription factor Seq+ 88334 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBSPON-IGHGP SBSPON chr8 73081163 - IGHGP chr14 105668321 - Exonic hg38 CESC TCGA-VS-A9UT-01A 12 0 Out-of-frame Inter-chr q21.11 Seq+ 88335 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNTA1-PXMP4 SNTA1 chr20 33438841 - PXMP4 chr20 33714736 - Exonic hg38 CESC TCGA-VS-A9UT-01A 4 6 Out-of-frame Intra-chr q11.21 q11.22 Seq+ 88336 ChimerSeq TCGA FAWG TCGA_RNA-Seq C16orf59-CCNF C16orf59 chr16 2462475 + CCNF chr16 2458157 + Exonic hg38 CESC TCGA-VS-A9UT-01A 3 9 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 88337 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX6-SLC37A4 DDX6 chr11 118779632 - SLC37A4 chr11 119029564 - Exonic hg38 CESC TCGA-VS-A9UT-01A 4 3 CDS-5'UTR Intra-chr q23.3 88338 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC16A-MCRIP1 SEC16A chr9 136471975 - MCRIP1 chr17 81824554 - Exonic hg38 CESC TCGA-VS-A9UT-01A 3 6 Out-of-frame Inter-chr q34.3 q25.3 88339 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2Q2P2-ZSCAN2 UBE2Q2P2 chr15 82404751 + ZSCAN2 chr15 84603820 + Exonic hg38 CESC TCGA-VS-A9UT-01A 1 11 3'UTR-5'UTR Intra-chr q25.2 Transcription factor 88340 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R1A-SMIM17 PPP2R1A chr19 52190174 + SMIM17 chr19 56645568 + Exonic hg38 CESC TCGA-VS-A9UT-01A 1 6 5'UTR-5'UTR Intra-chr q13.41 Oncogene q13.43 88341 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTX3L-FAM162A DTX3L chr3 122570672 + FAM162A chr3 122407281 + Exonic hg38 CESC TCGA-VS-A9UV-01A 5 7 In-Frame Intra-chr q21.1 q21.1 Seq+ 88342 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXNB2-ST3GAL1 PLXNB2 chr22 50280005 - ST3GAL1 chr8 133499189 - Exonic hg38 CESC TCGA-VS-A9V0-01A 40 122 CDS-5'UTR Inter-chr q13.33 q24.22 Seq+ 88343 ChimerSeq TCGA FAWG TCGA_RNA-Seq OGFOD3-EIF1 OGFOD3 chr17 82411455 - EIF1 chr17 41690782 + Exonic hg38 CESC TCGA-VS-A9V0-01A 21 29 Out-of-frame Intra-chr q25.3 q21.2 Seq+ 88344 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXK2-AMBRA1 FOXK2 chr17 82520307 + AMBRA1 chr11 46397943 - Exonic hg38 CESC TCGA-VS-A9V0-01A 5 18 Out-of-frame Inter-chr q25.3 Transcription factor p11.2 Seq+ 88345 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXK2-CHRM4 FOXK2 chr17 82520307 + CHRM4 chr11 46386586 - Exonic hg38 CESC TCGA-VS-A9V0-01A 5 2 CDS-5'UTR Inter-chr q25.3 Transcription factor p11.2 88346 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIC-TLE6 NFIC chr19 3382243 + TLE6 chr19 2980100 + Exonic hg38 CESC TCGA-VS-A9V0-01A 1 17 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 88347 ChimerSeq TCGA FAWG TCGA_RNA-Seq BORCS8-TM6SF2 BORCS8 chr19 19192081 - TM6SF2 chr19 19268087 - Exonic hg38 CESC TCGA-VS-A9V0-01A 3 6 Out-of-frame Intra-chr p13.11 p13.11 88348 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC9A3R1-RAB37 SLC9A3R1 chr17 74763520 + RAB37 chr17 74729256 + Exonic hg38 CESC TCGA-VS-A9V0-01A 2 10 Out-of-frame Intra-chr q25.1 Tumor suppressor gene q25.1 Seq+ 88349 ChimerSeq TCGA FAWG TCGA_RNA-Seq S100P-BZW2 S100P chr4 6694070 + BZW2 chr7 16674412 + Exonic hg38 CESC TCGA-VS-A9V0-01A 3 1 Out-of-frame Inter-chr p16.1 p21.1 Seq+ 88350 ChimerSeq TCGA FAWG TCGA_RNA-Seq PREP-HOTAIRM1 PREP chr6 105397853 - HOTAIRM1 chr7 27099779 + Exonic hg38 CESC TCGA-VS-A9V0-01A 2 3 CDS-5'UTR Inter-chr q21 p15.2 88351 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3R3-MOB3C PIK3R3 chr1 46077515 - MOB3C chr1 46613371 - Exonic hg38 CESC TCGA-VS-A9V0-01A 2 1 Out-of-frame Intra-chr p34.1 p33 88352 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBLIM1-DNAH14 FBLIM1 chr1 15774796 + DNAH14 chr1 225231073 + Exonic hg38 CESC TCGA-VS-A9V0-01A 1 4 Out-of-frame Intra-chr p36.21 q42.12 Seq+ 88353 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCALD-UBR5 NCALD chr8 102020237 - UBR5 chr8 102305295 - Exonic hg38 CESC TCGA-VS-A9V0-01A 1 3 5'UTR-CDS Intra-chr q22.3 q22.3 Oncogene Seq+ 88354 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTBP3-GDF15 PTBP3 chr9 112297832 - GDF15 chr19 18382313 + Exonic hg38 CESC TCGA-VS-A9V1-01A 4 17 CDS-5'UTR Inter-chr q32 p13.11 88355 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNGR2-TMC8 SYNGR2 chr17 78168715 + TMC8 chr17 78134394 + Exonic hg38 CESC TCGA-VS-A9V5-01A 2 1 In-Frame Intra-chr q25.3 q25.3 88356 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806934 + TACC3 chr4 1735731 + Exonic hg38 CESC TCGA-WL-A834-01A 1049 2300 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 88357 ChimerSeq TCGA FAWG TCGA_RNA-Seq TACC3-FGFR3 TACC3 chr4 1735832 + FGFR3 chr4 1801365 + Exonic hg38 CESC TCGA-WL-A834-01A 1000 1000 Out-of-frame Intra-chr p16.3 p16.3 TK:FGFR Oncogene 88358 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCA1-PTGR1 ABCA1 chr9 104903614 - PTGR1 chr9 111597432 - Exonic hg38 CESC TCGA-ZJ-A8QO-01A 17 44 CDS-5'UTR Intra-chr q31.1 q31.3 Seq+ 88359 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPD-SCD5 HNRNPD chr4 82373446 - SCD5 chr4 82705413 - Exonic hg38 CESC TCGA-ZJ-A8QO-01A 2 5 Out-of-frame Intra-chr q21.22 q21.22 Seq+ 88360 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIOK1-EYS RIOK1 chr6 7414390 + EYS chr6 65296119 - Exonic hg38 CESC TCGA-ZJ-A8QQ-01A 8 24 Out-of-frame Intra-chr p24.3 Atypical:RIO q12 Seq+ 88361 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCT3-IQGAP3 CCT3 chr1 156310558 - IQGAP3 chr1 156540916 - Exonic hg38 CESC TCGA-ZJ-A8QQ-01A 6 12 Out-of-frame Intra-chr q22 q22 Seq+ 88362 ChimerSeq TCGA FAWG TCGA_RNA-Seq PXN-RAB35 PXN chr12 120265616 - RAB35 chr12 120108466 - Exonic hg38 CESC TCGA-ZJ-A8QQ-01A 1000 1000 Out-of-frame Intra-chr q24.23 q24.23 88363 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB11A-PPP6R3 RAB11A chr15 65869625 + PPP6R3 chr11 68609904 + Exonic hg38 CESC TCGA-ZJ-A8QR-01A 31 151 Out-of-frame Inter-chr q22.31 q13.2 Seq+ 88364 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNL3L-XAGE3 GNL3L chrX 54530419 + XAGE3 chrX 52867141 - Exonic hg38 CESC TCGA-ZJ-A8QR-01A 1 3 5'UTR-5'UTR Intra-chr p11.22 p11.22 Seq+ 88365 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRWD3-LRCH2 BRWD3 chrX 80808539 - LRCH2 chrX 115156667 - Exonic hg38 CESC TCGA-ZJ-AAX4-01A 2 9 Out-of-frame Intra-chr q21.1 q23 Seq+ 88366 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHKA2-FBXO36 PHKA2 chrX 18905758 - FBXO36 chr2 229976241 + Exonic hg38 CESC TCGA-ZJ-AAX4-01A 1 7 Out-of-frame Inter-chr p22.13 q36.3 88367 ChimerSeq TCGA FAWG TCGA_RNA-Seq THADA-GACAT3 THADA chr2 43286908 - GACAT3 chr2 16080898 + Exonic hg38 CESC TCGA-ZJ-AAX8-01A 3 7 CDS-5'UTR Intra-chr p21 p24.3 88368 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIK2-C11orf53 SIK2 chr11 111620402 + C11orf53 chr11 111281398 + Exonic hg38 CESC TCGA-ZJ-AAXB-01A 4 26 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 88369 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT11-CNTNAP2 GALNT11 chr7 152025884 + CNTNAP2 chr7 147562138 + Exonic hg38 CESC TCGA-ZJ-AAXB-01A 1 4 CDS-3'UTR Intra-chr q36.1 Tumor suppressor gene Seq+ 88370 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXP1-UBA3 FOXP1 chr3 71493426 - UBA3 chr3 69080153 - Exonic hg38 CESC TCGA-ZJ-AAXB-01A 1 2 5'UTR-CDS Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor p14.1 Seq+ 88371 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC24-ST3GAL3 CCDC24 chr1 43993964 + ST3GAL3 chr1 43824731 + Exonic hg38 CESC TCGA-ZJ-AAXN-01A 1 3 In-Frame Intra-chr p34.1 p34.1 Seq+ 88372 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTR3-VPS13B ACTR3 chr2 113890323 + VPS13B chr8 99575658 + Exonic hg38 CESC TCGA-ZJ-AAXN-01A 1 2 In-Frame Inter-chr q14.1 q22.2 88373 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806934 + TACC3 chr4 1739702 + Exonic hg38 CESC TCGA-ZJ-AAXT-01A 1515 3239 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 88374 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSH2-CCDC57 MSH2 chr2 47410372 + CCDC57 chr17 82163357 - Exonic hg38 CESC TCGA-ZJ-AB0I-01A 9 9 Out-of-frame Inter-chr p21 Oncogene Tumor suppressor gene q25.3 Seq+ 88375 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNL1-SOCS1 GNL1 chr6 30552467 - SOCS1 chr16 11255528 - Exonic hg38 CESC TCGA-ZJ-AB0I-01A 4 13 5'UTR-5'UTR Inter-chr p13.13 Oncogene Tumor suppressor gene Seq+ 88376 ChimerSeq TCGA FAWG TCGA_RNA-Seq TULP4-SPSB4 TULP4 chr6 158314268 + SPSB4 chr3 141147142 + Exonic hg38 CESC TCGA-ZJ-AB0I-01A 1 17 Out-of-frame Inter-chr q25.3 q23 Seq+ 88377 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM160A1-ADAM2 FAM160A1 chr4 151409465 + ADAM2 chr8 39769575 - Exonic hg38 CESC TCGA-ZJ-AB0I-01A 1 5 5'UTR-5'UTR Inter-chr q31.3 88378 ChimerSeq TCGA FAWG TCGA_RNA-Seq MUM1-EFNA2 MUM1 chr19 1367220 + EFNA2 chr19 1299824 + Exonic hg38 CHOL TCGA-3X-AAVA-01A 3 5 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p13.3 Seq+ 88379 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRF-MICALL2 PTPRF chr1 43578920 + MICALL2 chr7 1428791 - Exonic hg38 CHOL TCGA-3X-AAVA-01A 1 8 CDS-3'UTR Inter-chr p34.2 p22.3 88380 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF2-DHX37 SMURF2 chr17 64661829 - DHX37 chr12 124960423 - Exonic hg38 CHOL TCGA-3X-AAVA-01A 1 4 Out-of-frame Inter-chr q24.1 q24.31 88381 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIB3-SLC24A3 TRIB3 chr20 391579 + SLC24A3 chr20 19515488 + Exonic hg38 CHOL TCGA-3X-AAVB-01A 1 15 Out-of-frame Intra-chr p13 p11.23 Seq+ 88382 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAFAH1B2-MRPL2 PAFAH1B2 chr11 117144418 + MRPL2 chr6 43058233 - Exonic hg38 CHOL TCGA-3X-AAVC-01A 9 22 5'UTR-CDS Inter-chr q23.3 p21.1 Seq+ 88383 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF311-TTBK1 ZNF311 chr6 28998734 - TTBK1 chr6 43269643 + Exonic hg38 CHOL TCGA-3X-AAVC-01A 3 18 5'UTR-CDS Intra-chr p22.1 Transcription factor p21.1 CK1:TTBK Seq+ 88384 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED20-C6orf132 MED20 chr6 41909345 - C6orf132 chr6 42107583 - Exonic hg38 CHOL TCGA-3X-AAVC-01A 1 3 Out-of-frame Intra-chr p21.1 p21.1 88385 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHLDB2-TMPRSS7 PHLDB2 chr3 111732703 + TMPRSS7 chr3 112038072 + Exonic hg38 CHOL TCGA-3X-AAVE-01A 6 26 5'UTR-5'UTR Intra-chr q13.2 q13.2 88386 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCXD2-TMPRSS7 PLCXD2 chr3 111732703 + TMPRSS7 chr3 112038072 + Exonic hg38 CHOL TCGA-3X-AAVE-01A 6 26 3'UTR-5'UTR Intra-chr q13.2 q13.2 88387 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACSS1-CDH4 ACSS1 chr20 25048085 - CDH4 chr20 61743563 + Exonic hg38 CHOL TCGA-3X-AAVE-01A 2 3 CDS-3'UTR Intra-chr p11.21 q13.33 Tumor suppressor gene Seq+ 88388 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUL4A-TMCO3 CUL4A chr13 113210088 + TMCO3 chr13 113534045 + Exonic hg38 CHOL TCGA-3X-AAVE-01A 1 3 In-Frame Intra-chr q34 q34 88389 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPHS1-PTER SEPHS1 chr10 13344758 - PTER chr10 16505020 + Exonic hg38 CHOL TCGA-3X-AAVE-01A 1 1 Out-of-frame Intra-chr p13 p13 88390 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASAL2-COPA RASAL2 chr1 178300118 + COPA chr1 160340294 - Exonic hg38 CHOL TCGA-4G-AAZO-01A 9 22 In-Frame Intra-chr q25.2 Tumor suppressor gene q23.2 Seq+ 88391 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLASP1-FBXO11 CLASP1 chr2 121605701 - FBXO11 chr2 47820456 - Exonic hg38 CHOL TCGA-4G-AAZO-01A 1 4 Out-of-frame Intra-chr q14.3 p16.3 Seq+ 88392 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMG1P3-MFSD13B SMG1P3 chr16 21519828 - MFSD13B chr16 22402692 + Exonic hg38 CHOL TCGA-W5-AA2I-01A 6 8 3'UTR-5'UTR Intra-chr p12.2 88393 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR2-SHTN1 FGFR2 chr10 121483698 - SHTN1 chr10 116948997 - Exonic hg38 CHOL TCGA-W5-AA2Q-01A 68 997 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q25.3 Pub Seq+ 88394 ChimerSeq TCGA FAWG TCGA_RNA-Seq NR3C2-SPATA17 NR3C2 chr4 148435104 - SPATA17 chr1 217862774 + Exonic hg38 CHOL TCGA-W5-AA2T-01A 4 20 Out-of-frame Inter-chr q31.23 Transcription factor q41 Seq+ 88395 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA4-RSU1 NCOA4 chr10 46030526 - RSU1 chr10 16593496 - Exonic hg38 CHOL TCGA-W5-AA2U-01A 13 56 5'UTR-CDS Intra-chr q11.22 Oncogene Tumor suppressor gene p13 Seq+ 88396 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSU1-LARP4B RSU1 chr10 16816973 - LARP4B chr10 817889 - Exonic hg38 CHOL TCGA-W5-AA2U-01A 7 8 Out-of-frame Intra-chr p13 p15.3 Seq+ 88397 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF20-CEP250 PHF20 chr20 35772079 + CEP250 chr20 35508943 + Exonic hg38 CHOL TCGA-W5-AA2U-01A 8 2 5'UTR-CDS Intra-chr q11.22 Transcription factor q11.22 Seq+ 88398 ChimerSeq TCGA FAWG TCGA_RNA-Seq OLA1-CAB39 OLA1 chr2 174123180 - CAB39 chr2 230798729 + Exonic hg38 CHOL TCGA-W5-AA2U-01A 4 17 In-Frame Intra-chr q31.1 q37.1 Seq+ 88399 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOXC6-KBTBD12 HOXC6 chr12 54017414 + KBTBD12 chr3 127963189 + Exonic hg38 CHOL TCGA-W5-AA2U-01A 4 7 5'UTR-CDS Inter-chr q13.13 Transcription factor q21.3 Seq+ 88400 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOXC4-KBTBD12 HOXC4 chr12 54017414 + KBTBD12 chr3 127963189 + Exonic hg38 CHOL TCGA-W5-AA2U-01A 4 6 5'UTR-CDS Inter-chr q13.13 Transcription factor q21.3 Seq+ 88401 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR2-BICC1 FGFR2 chr10 121483698 - BICC1 chr10 58806584 + Exonic hg38 CHOL TCGA-W5-AA2W-01A 249 602 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q21.1 Seq+ 88402 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC29A2-RAB6A SLC29A2 chr11 66365936 - RAB6A chr11 73679720 - Exonic hg38 CHOL TCGA-W5-AA2X-01A 19 107 In-Frame Intra-chr q13.2 q13.4 Seq+ 88403 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-SPCS2 SHANK2 chr11 70659828 - SPCS2 chr11 74976857 + Exonic hg38 CHOL TCGA-W5-AA2X-01A 13 4 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 88404 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF780A-NADSYN1 ZNF780A chr19 40090906 - NADSYN1 chr11 71490845 + Exonic hg38 CHOL TCGA-W5-AA2X-01A 6 30 5'UTR-CDS Inter-chr Transcription factor q13.4 Seq+ 88405 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP1-TBC1D30 SRGAP1 chr12 64017012 + TBC1D30 chr12 64864668 + Exonic hg38 CHOL TCGA-W5-AA2X-01A 6 12 In-Frame Intra-chr q14.2 q14.3 Seq+ 88406 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3IP-BEST3 RAB3IP chr12 69784815 + BEST3 chr12 69678893 - Exonic hg38 CHOL TCGA-W5-AA2X-01A 3 23 Out-of-frame Intra-chr q15 q15 Seq+ 88407 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM2A-RBM14 KDM2A chr11 67121358 + RBM14 chr11 66624214 + Exonic hg38 CHOL TCGA-W5-AA2X-01A 6 6 Out-of-frame Intra-chr q13.2 Transcription factor q13.2 Tumor suppressor gene Seq+ 88408 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-SHANK2 UVRAG chr11 75912039 + SHANK2 chr11 70807171 - Exonic hg38 CHOL TCGA-W5-AA2X-01A 2 8 In-Frame Intra-chr q13.5 Tumor suppressor gene q13.4 Seq+ 88409 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP1-OS9 SRGAP1 chr12 63844883 + OS9 chr12 57715760 + Exonic hg38 CHOL TCGA-W5-AA2X-01A 2 4 Out-of-frame Intra-chr q14.2 q13.3 Seq+ 88410 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM14-KDM2A RBM14 chr11 66625678 + KDM2A chr11 67180079 + Exonic hg38 CHOL TCGA-W5-AA2X-01A 1 5 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 Transcription factor 88411 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR2-CCDC186 FGFR2 chr10 121483698 - CCDC186 chr10 114151220 - Exonic hg38 CHOL TCGA-W5-AA2Z-01A 25 136 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q25.3 Seq+ 88412 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM1-FGFR2 DNM1 chr9 128191780 + FGFR2 chr10 121480021 - Exonic hg38 CHOL TCGA-W5-AA2Z-01A 4 11 5'UTR-CDS Inter-chr q34.11 q26.13 TK:FGFR Oncogene 88413 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13D-VEGFC VPS13D chr1 12293704 + VEGFC chr4 176729746 - Exonic hg38 CHOL TCGA-W5-AA2Z-01A 4 11 In-Frame Inter-chr p36.22 q34.3 Seq+ 88414 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAZ2B-PLA2R1 BAZ2B chr2 159555823 - PLA2R1 chr2 160028963 - Exonic hg38 CHOL TCGA-W5-AA30-01A 1 4 5'UTR-CDS Intra-chr q24.2 Transcription factor q24.2 Tumor suppressor gene Seq+ 88415 ChimerSeq TCGA FAWG TCGA_RNA-Seq RILPL2-SBNO1 RILPL2 chr12 123430508 - SBNO1 chr12 123298171 - Exonic hg38 CHOL TCGA-W5-AA30-01A 1 3 In-Frame Intra-chr q24.31 q24.31 88416 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPNS2-PSMD11 SPNS2 chr17 4525193 + PSMD11 chr17 32477521 + Exonic hg38 CHOL TCGA-W5-AA31-01A 22 81 In-Frame Intra-chr p13.2 q11.2 Seq+ 88417 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD11-CCL15 PSMD11 chr17 32454619 + CCL15 chr17 35998391 - Exonic hg38 CHOL TCGA-W5-AA31-01A 15 79 CDS-5'UTR Intra-chr q11.2 Seq+ 88418 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK1-NCOR1 TAOK1 chr17 29510992 + NCOR1 chr17 16080727 - Exonic hg38 CHOL TCGA-W5-AA31-01A 13 47 In-Frame Intra-chr q11.2 p11.2 Oncogene Seq+ 88419 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-MAP2K4 NF1 chr17 31182665 + MAP2K4 chr17 12125294 + Exonic hg38 CHOL TCGA-W5-AA31-01A 16 23 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene p12 STE:STE7 Oncogene Tumor suppressor gene Seq+ 88420 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO18A-NF1 MYO18A chr17 29165942 - NF1 chr17 31155983 + Exonic hg38 CHOL TCGA-W5-AA31-01A 6 28 In-Frame Intra-chr q11.2 Oncogene q11.2 Oncogene Tumor suppressor gene Seq+ 88421 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCL14-MYH10 CCL14 chr17 35986571 - MYH10 chr17 8623497 - Exonic hg38 CHOL TCGA-W5-AA31-01A 6 24 5'UTR-5'UTR Intra-chr q12 p13.1 Seq+ 88422 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLFN13-ARHGAP44 SLFN13 chr17 35448722 - ARHGAP44 chr17 12952501 + Exonic hg38 CHOL TCGA-W5-AA31-01A 9 4 5'UTR-5'UTR Intra-chr q12 p12 Seq+ 88423 ChimerSeq TCGA FAWG TCGA_RNA-Seq INPP5K-RPA1 INPP5K chr17 1513872 - RPA1 chr17 1842803 + Exonic hg38 CHOL TCGA-W5-AA31-01A 3 23 Out-of-frame Intra-chr p13.3 p13.3 Tumor suppressor gene Seq+ 88424 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNRG-PIK3R5 SYNRG chr17 37579132 - PIK3R5 chr17 8905737 - Exonic hg38 CHOL TCGA-W5-AA31-01A 5 15 5'UTR-5'UTR Intra-chr p13.1 Seq+ 88425 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPA1-WDR81 RPA1 chr17 1853189 + WDR81 chr17 1730380 + Exonic hg38 CHOL TCGA-W5-AA31-01A 3 22 CDS-3'UTR Intra-chr p13.3 Tumor suppressor gene Seq+ 88426 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELAC2-RABEP1 ELAC2 chr17 13010613 - RABEP1 chr17 5308694 + Exonic hg38 CHOL TCGA-W5-AA31-01A 3 20 Out-of-frame Intra-chr p12 p13.2 Seq+ 88427 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNM3-P2RX5 PITPNM3 chr17 6468225 - P2RX5 chr17 3691794 - Exonic hg38 CHOL TCGA-W5-AA31-01A 2 24 Out-of-frame Intra-chr p13.1 p13.2 Seq+ 88428 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOR1-HIC1 NCOR1 chr17 16070165 - HIC1 chr17 2056671 + Exonic hg38 CHOL TCGA-W5-AA31-01A 4 13 In-Frame Intra-chr p11.2 Oncogene p13.3 Tumor suppressor gene Transcription factor Seq+ 88429 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF2P1-DHRS7B SMURF2P1 chr17 30600916 + DHRS7B chr17 21178233 + Exonic hg38 CHOL TCGA-W5-AA31-01A 3 6 Out-of-frame Intra-chr q11.2 p11.2 88430 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC19-MMP28 TTC19 chr17 16000245 + MMP28 chr17 35756419 - Exonic hg38 CHOL TCGA-W5-AA31-01A 1 13 CDS-5'UTR Intra-chr p12 q12 Seq+ 88431 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLOD4-EIF5A GLOD4 chr17 769869 - EIF5A chr17 7309615 + Exonic hg38 CHOL TCGA-W5-AA31-01A 2 7 In-Frame Intra-chr p13.3 p13.1 Seq+ 88432 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1D-HNF1B MYO1D chr17 32721023 - HNF1B chr17 37705049 - Exonic hg38 CHOL TCGA-W5-AA31-01A 1 10 CDS-5'UTR Intra-chr q11.2 q12 Transcription factor Seq+ 88433 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPAR1-AGO3 LPAR1 chr9 110941421 - AGO3 chr1 36034174 + Exonic hg38 CHOL TCGA-W5-AA34-01A 1 5 In-Frame Inter-chr q31.3 p34.3 88434 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4A-OPRD1 KDM4A chr1 43655766 + OPRD1 chr1 28858954 + Exonic hg38 CHOL TCGA-W5-AA36-01A 3 0 In-Frame Intra-chr p34.2 p35.3 Seq+ 88435 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL1RAP-SIRPG IL1RAP chr3 190629498 + SIRPG chr20 1649408 - Exonic hg38 CHOL TCGA-W5-AA39-01A 3 10 In-Frame Inter-chr q28 p13 Seq+ 88436 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1671-NF2 KIAA1671 chr22 25112462 + NF2 chr22 29636751 + Exonic hg38 CHOL TCGA-W5-AA39-01A 2 13 CDS-5'UTR Intra-chr q11.23 q12.2 Oncogene Tumor suppressor gene 88437 ChimerSeq TCGA FAWG TCGA_RNA-Seq AJUBA-CEP192 AJUBA chr14 22976645 - CEP192 chr18 13087017 + Exonic hg38 CHOL TCGA-W6-AA0S-01A 12 35 In-Frame Inter-chr q11.2 p11.21 Seq+ 88438 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRAS-CLDN14 NRAS chr1 114716050 - CLDN14 chr21 36461776 - Exonic hg38 CHOL TCGA-W6-AA0S-01A 3 23 CDS-5'UTR Inter-chr p13.2 Oncogene q22.13 Seq+ 88439 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC26-GSDMC CCDC26 chr8 129679928 - GSDMC chr8 129760589 - Exonic hg38 CHOL TCGA-W6-AA0S-01A 3 7 3'UTR-5'UTR Intra-chr q24.21 q24.21 88440 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXP1-SH3RF2 FOXP1 chr3 71041328 - SH3RF2 chr5 146000058 + Exonic hg38 CHOL TCGA-WD-A7RX-01A 4 5 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor q32 Seq+ 88441 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNC-FAM201A CCNC chr6 99568496 - FAM201A chr9 38621832 + Exonic hg38 CHOL TCGA-YR-A95A-01A 6 14 CDS-5'UTR Inter-chr q16.2 Tumor suppressor gene p13.1 Seq+ 88442 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYT7-FADS3 SYT7 chr11 61551384 - FADS3 chr11 61878847 - Exonic hg38 CHOL TCGA-YR-A95A-01A 6 12 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 88443 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP35-SLC1A5 ARHGAP35 chr19 46989675 + SLC1A5 chr19 46778908 - Exonic hg38 CHOL TCGA-YR-A95A-01A 5 9 Out-of-frame Intra-chr q13.32 Transcription factor q13.32 Seq+ 88444 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRK-SMNDC1 PTPRK chr6 128240035 - SMNDC1 chr10 110298790 - Exonic hg38 CHOL TCGA-ZH-A8Y1-01A 43 205 5'UTR-CDS Inter-chr Tumor suppressor gene q25.2 Seq+ 88445 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR2-FRK FGFR2 chr10 121503790 - FRK chr6 116003998 - Exonic hg38 CHOL TCGA-ZH-A8Y1-01A 2 13 In-Frame Inter-chr q26.13 TK:FGFR Oncogene q22.1 TK:Src Tumor suppressor gene Seq+ 88446 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRK-BEND3 FRK chr6 116059968 - BEND3 chr6 107099296 - Exonic hg38 CHOL TCGA-ZH-A8Y1-01A 2 2 CDS-5'UTR Intra-chr q22.1 TK:Src Tumor suppressor gene q21 Seq+ 88447 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANAPC1P1-C2orf76 ANAPC1P1 chr2 86874055 + C2orf76 chr2 119340361 - Exonic hg38 CHOL TCGA-ZH-A8Y2-01A 10 47 5'UTR-5'UTR Intra-chr p11.2 q14.2 Seq+ 88448 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2orf76-ANKRD46 C2orf76 chr2 119366790 - ANKRD46 chr8 100529860 - Exonic hg38 CHOL TCGA-ZH-A8Y2-01A 1 17 5'UTR-5'UTR Inter-chr q14.2 q22.3 Seq+ 88449 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASC3-THRA CASC3 chr17 40168417 + THRA chr17 40093020 + Exonic hg38 CHOL TCGA-ZH-A8Y4-01A 6 58 In-Frame Intra-chr q21.1 q21.1 Tumor suppressor gene Transcription factor Seq+ 88450 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHROOM4-AR SHROOM4 chrX 50695786 - AR chrX 67686010 + Exonic hg38 CHOL TCGA-ZH-A8Y4-01A 2 5 In-Frame Intra-chr p11.22 q12 Oncogene Tumor suppressor gene Transcription factor Seq+ 88451 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR2-BICC1 FGFR2 chr10 121483698 - BICC1 chr10 58702074 + Exonic hg38 CHOL TCGA-ZH-A8Y5-01A 96 248 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q21.1 Seq+ 88452 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPBL-NACC1 NIPBL chr5 36972041 + NACC1 chr19 13135200 + Exonic hg38 CHOL TCGA-ZH-A8Y6-01A 24 86 CDS-5'UTR Inter-chr p13.2 p13.13 Seq+ 88453 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRS-TPM4 PTPRS chr19 5265008 - TPM4 chr19 16088027 + Exonic hg38 CHOL TCGA-ZH-A8Y8-01A 1 16 Out-of-frame Intra-chr p13.3 p13.12 88454 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL6ST-ZNF706 IL6ST chr5 55994784 - ZNF706 chr8 101201743 - Exonic hg38 CHOL TCGA-ZU-A8S4-01A 3 8 5'UTR-5'UTR Inter-chr q11.2 Oncogene q22.3 Transcription factor Seq+ 88455 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOXD11-NOC4L HOXD11 chr2 176104626 + NOC4L chr12 132150981 + Exonic hg38 COAD TCGA-3L-AA1B-01A 1 2 5'UTR-CDS Inter-chr q31.1 Transcription factor q24.33 88456 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD29-NPC1 ANKRD29 chr18 23629853 - NPC1 chr18 23522906 - Exonic hg38 COAD TCGA-4N-A93T-01A 1 5 CDS-3'UTR Intra-chr q11.2 q11.2 88457 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC3-KIF15 ZDHHC3 chr3 44945168 - KIF15 chr3 44873329 + Exonic hg38 COAD TCGA-4T-AA8H-01A 10 30 5'UTR-3'UTR Intra-chr 88458 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD7-TOX CHD7 chr8 60743097 + TOX chr8 58960008 - Exonic hg38 COAD TCGA-4T-AA8H-01A 4 34 In-Frame Intra-chr q12.2 q12.1 Seq+ 88459 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0907-RPS15A KIAA0907 chr1 155914213 - RPS15A chr16 18790337 - Exonic hg38 COAD TCGA-5M-AAT4-01A 3 14 Out-of-frame Inter-chr q22 p12.3 88460 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBCK1-CLCN7 RBCK1 chr20 419731 + CLCN7 chr16 1459187 - Exonic hg38 COAD TCGA-5M-AAT4-01A 2 3 In-Frame Inter-chr p13 Transcription factor p13.3 Seq+ 88461 ChimerSeq TCGA FAWG TCGA_RNA-Seq EYA3-GUCA1C EYA3 chr1 28088524 - GUCA1C chr3 108920585 - Exonic hg38 COAD TCGA-5M-AAT6-01A 3 9 5'UTR-CDS Inter-chr p35.3 q13.13 Seq+ 88462 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRLS1-TRMT6 CRLS1 chr20 6023422 + TRMT6 chr20 5944914 - Exonic hg38 COAD TCGA-5M-AATA-01A 3 21 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 88463 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS18-NTRK3 VPS18 chr15 40901014 + NTRK3 chr15 87880428 - Exonic hg38 COAD TCGA-A6-2674-01A 2 7 In-Frame Intra-chr q15.1 q25.3 Oncogene Tumor suppressor gene Seq+ 88464 ChimerSeq TCGA FAWG TCGA_RNA-Seq ME2-DCC ME2 chr18 50940386 + DCC chr18 53305578 + Exonic hg38 COAD TCGA-A6-2674-01A 2 5 In-Frame Intra-chr q21.2 q21.2 Oncogene Tumor suppressor gene 88465 ChimerSeq TCGA FAWG TCGA_RNA-Seq BBS9-KMT2E BBS9 chr7 33604975 + KMT2E chr7 105040839 + Exonic hg38 COAD TCGA-A6-2674-01A 1 1 5'UTR-5'UTR Intra-chr p14.3 q22.3 88466 ChimerSeq TCGA FAWG TCGA_RNA-Seq BBX-SMC5 BBX chr3 107526398 + SMC5 chr9 70344144 + Exonic hg38 COAD TCGA-A6-2674-01A 1 1 5'UTR-CDS Inter-chr q13.12 Transcription factor q21.12 88467 ChimerSeq TCGA FAWG TCGA_RNA-Seq C3orf58-SLC9A9 C3orf58 chr3 143972989 + SLC9A9 chr3 143796903 - Exonic hg38 COAD TCGA-A6-2674-01A 1 1 Out-of-frame Intra-chr q24 q24 88468 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOB3B-C9orf72 MOB3B chr9 27529555 - C9orf72 chr9 27567164 - Exonic hg38 COAD TCGA-A6-2674-01A 1 1 5'UTR-5'UTR Intra-chr p21.2 p21.2 88469 ChimerSeq TCGA FAWG TCGA_RNA-Seq YWHAB-BCL2L1 YWHAB chr20 44885886 + BCL2L1 chr20 31722330 - Exonic hg38 COAD TCGA-A6-2675-01A 5 32 5'UTR-5'UTR Intra-chr q13.12 q11.21 Oncogene Seq+ 88470 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM9SF4-COMMD7 TM9SF4 chr20 32161365 + COMMD7 chr20 32728142 - Exonic hg38 COAD TCGA-A6-2675-01A 2 23 In-Frame Intra-chr q11.21 q11.21 Seq+ 88471 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRBP1-SNTA1 RRBP1 chr20 17658596 - SNTA1 chr20 33439026 - Exonic hg38 COAD TCGA-A6-2675-01A 2 13 In-Frame Intra-chr p12.1 q11.21 88472 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGAPB-ITCH RALGAPB chr20 38570847 + ITCH chr20 34412515 + Exonic hg38 COAD TCGA-A6-2675-01A 2 4 In-Frame Intra-chr q11.23 q11.22 Seq+ 88473 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH17-ERLIN2 CDH17 chr8 94194635 - ERLIN2 chr8 37740365 + Exonic hg38 COAD TCGA-A6-2677-01A 3 37 Out-of-frame Intra-chr q22.1 Tumor suppressor gene p11.23 Seq+ 88474 ChimerSeq TCGA FAWG TCGA_RNA-Seq C20orf194-ASPH C20orf194 chr20 3304440 - ASPH chr8 61646878 - Exonic hg38 COAD TCGA-A6-2677-01A 3 2 Out-of-frame Inter-chr p13 q12.3 Seq+ 88475 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESCO2-PTK2B ESCO2 chr8 27784057 + PTK2B chr8 27397548 + Exonic hg38 COAD TCGA-A6-2677-01A 2 2 CDS-5'UTR Intra-chr p21.1 p21.2 Seq+ 88476 ChimerSeq TCGA FAWG TCGA_RNA-Seq UQCC1-TACC1 UQCC1 chr20 35347164 - TACC1 chr8 38825308 + Exonic hg38 COAD TCGA-A6-2677-01A 1 3 Out-of-frame Inter-chr q11.22 p11.22 88477 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3BP4-SNED1 SH3BP4 chr2 234952170 + SNED1 chr2 241033735 + Exonic hg38 COAD TCGA-A6-2684-01A 1 3 5'UTR-CDS Intra-chr q37.2 q37.3 Seq+ 88478 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABR-YWHAE ABR chr17 1228793 - YWHAE chr17 1365058 - Exonic hg38 COAD TCGA-A6-2686-01A 2 6 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 88479 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCTD13-ICA1 KCTD13 chr16 29923190 - ICA1 chr7 8143972 - Exonic hg38 COAD TCGA-A6-3809-01A 1 1 In-Frame Inter-chr p11.2 p21.3 88480 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A8-PPA1 SLC39A8 chr4 102307436 - PPA1 chr10 70209685 - Exonic hg38 COAD TCGA-A6-3809-01A 1 1 Out-of-frame Inter-chr q24 q22.1 88481 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELF2-ZMYND11 CELF2 chr10 11018163 + ZMYND11 chr10 179994 + Exonic hg38 COAD TCGA-A6-3810-01A 1 1 CDS-5'UTR Intra-chr p14 p15.3 Tumor suppressor gene 88482 ChimerSeq TCGA FAWG TCGA_RNA-Seq HERC2-SLC12A2 HERC2 chr15 28280068 - SLC12A2 chr5 128188943 + Exonic hg38 COAD TCGA-A6-5656-01A 5 27 5'UTR-5'UTR Inter-chr q23.3 Seq+ 88483 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF4ENIF1-COMT EIF4ENIF1 chr22 31471844 - COMT chr22 19961199 + Exonic hg38 COAD TCGA-A6-5657-01A 22 59 CDS-5'UTR Intra-chr q12.2 q11.21 Seq+ 88484 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTLL6-WRAP53 TTLL6 chr17 48815839 - WRAP53 chr17 7687377 + Exonic hg38 COAD TCGA-A6-5657-01A 6 67 Out-of-frame Intra-chr q21.32 p13.1 88485 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1671-CHEK2 KIAA1671 chr22 25112462 + CHEK2 chr22 28734727 - Exonic hg38 COAD TCGA-A6-5657-01A 2 7 CDS-5'UTR Intra-chr q11.23 q12.1 Oncogene Tumor suppressor gene 88486 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1671-EIF4ENIF1 KIAA1671 chr22 25014566 + EIF4ENIF1 chr22 31437818 - Exonic hg38 COAD TCGA-A6-5657-01A 2 7 Out-of-frame Intra-chr q11.23 q12.2 88487 ChimerSeq TCGA FAWG TCGA_RNA-Seq PISD-MED15 PISD chr22 31630804 - MED15 chr22 20537117 + Exonic hg38 COAD TCGA-A6-5657-01A 3 2 5'UTR-5'UTR Intra-chr q12.2 q11.21 Seq+ 88488 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCR-ARVCF BCR chr22 23273774 + ARVCF chr22 19982091 - Exonic hg38 COAD TCGA-A6-5657-01A 2 3 In-Frame Intra-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q11.21 Seq+ 88489 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1671-CRKL KIAA1671 chr22 25029540 + CRKL chr22 20949711 + Exonic hg38 COAD TCGA-A6-5657-01A 1 6 Out-of-frame Intra-chr q11.23 q11.21 Oncogene 88490 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1D-PIGS MYO1D chr17 32876778 - PIGS chr17 28570963 - Exonic hg38 COAD TCGA-A6-5657-01A 1 5 Out-of-frame Intra-chr q11.2 q11.2 88491 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNAP29-SFI1 SNAP29 chr22 20870533 + SFI1 chr22 31616745 + Exonic hg38 COAD TCGA-A6-5657-01A 1 4 Out-of-frame Intra-chr q11.21 q12.2 88492 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP32-LRRC37A2 USP32 chr17 60294683 - LRRC37A2 chr17 46553400 + Exonic hg38 COAD TCGA-A6-5657-01A 1 2 CDS-3'UTR Intra-chr q23.2 88493 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMPSTE24-TMCO2 ZMPSTE24 chr1 40268535 + TMCO2 chr1 40251283 + Exonic hg38 COAD TCGA-A6-5660-01A 52 245 In-Frame Intra-chr p34.2 p34.2 Seq+ 88494 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA5-RNF114 LAMA5 chr20 62362400 - RNF114 chr20 49941561 + Exonic hg38 COAD TCGA-A6-5660-01A 9 54 Out-of-frame Intra-chr q13.33 q13.13 Seq+ 88495 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2E-TUFT1 KMT2E chr7 105107925 + TUFT1 chr1 151569657 + Exonic hg38 COAD TCGA-A6-5660-01A 5 17 In-Frame Inter-chr q22.3 q21.3 88496 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALY-SLC24A3 RALY chr20 34078553 + SLC24A3 chr20 19717528 + Exonic hg38 COAD TCGA-A6-5660-01A 1 22 3'UTR-CDS Intra-chr q11.22 p11.23 Seq+ 88497 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUFT1-KMT2E TUFT1 chr1 151566228 + KMT2E chr7 105108942 + Exonic hg38 COAD TCGA-A6-5660-01A 3 3 In-Frame Inter-chr q21.3 q22.3 88498 ChimerSeq TCGA FAWG TCGA_RNA-Seq SESTD1-CCDC141 SESTD1 chr2 179264499 - CCDC141 chr2 178961483 - Exonic hg38 COAD TCGA-A6-5661-01A 1 3 5'UTR-CDS Intra-chr q31.2 q31.2 88499 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNM2-PGD PITPNM2 chr12 123110385 - PGD chr1 10399629 + Exonic hg38 COAD TCGA-A6-5664-01A 2 8 5'UTR-5'UTR Inter-chr q24.31 p36.22 Seq+ 88500 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMYM4-BSDC1 ZMYM4 chr1 35325405 + BSDC1 chr1 32386895 - Exonic hg38 COAD TCGA-A6-5664-01A 1 9 Out-of-frame Intra-chr p34.3 p35.1 Seq+ 88501 ChimerSeq TCGA FAWG TCGA_RNA-Seq BSDC1-ZMYM4 BSDC1 chr1 32394080 - ZMYM4 chr1 35358925 + Exonic hg38 COAD TCGA-A6-5664-01A 1 8 Out-of-frame Intra-chr p35.1 p34.3 Seq+ 88502 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMIM1-FAAP20 SMIM1 chr1 3773181 + FAAP20 chr1 2201225 - Exonic hg38 COAD TCGA-A6-5664-01A 1 7 5'UTR-5'UTR Intra-chr p36.32 p36.33 88503 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF1B-RERE KIF1B chr1 10375373 + RERE chr1 8557523 - Exonic hg38 COAD TCGA-A6-5664-01A 1 3 Out-of-frame Intra-chr p36.22 Tumor suppressor gene p36.23 Seq+ 88504 ChimerSeq TCGA FAWG TCGA_RNA-Seq LYN-VPS13B LYN chr8 55880103 + VPS13B chr8 99501687 + Exonic hg38 COAD TCGA-A6-5666-01A 3 6 5'UTR-CDS Intra-chr q12.1 TK:Src q22.2 Seq+ 88505 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXN3-CDKL1 FOXN3 chr14 89411934 - CDKL1 chr14 50330181 - Exonic hg38 COAD TCGA-A6-5667-01A 15 43 In-Frame Intra-chr q32.11 Transcription factor q22.1 CMGC:CDKL Seq+ 88506 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAIAP2L1-DMTF1 BAIAP2L1 chr7 98400802 - DMTF1 chr7 87170995 + Exonic hg38 COAD TCGA-A6-5667-01A 12 14 Out-of-frame Intra-chr q22.1 q21.12 Tumor suppressor gene Transcription factor Seq+ 88507 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTI1-EFCAB8 TTI1 chr20 38033404 - EFCAB8 chr20 32958421 + Exonic hg38 COAD TCGA-A6-5667-01A 15 1 5'UTR-CDS Intra-chr q11.23 q11.21 88508 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB20-DPYSL2 ZBTB20 chr3 114693528 - DPYSL2 chr8 26634780 + Exonic hg38 COAD TCGA-A6-6137-01A 2 9 5'UTR-CDS Inter-chr q13.31 Transcription factor p21.2 Seq+ 88509 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHCY-RPLP1 AHCY chr20 34295395 - RPLP1 chr15 69453647 + Exonic hg38 COAD TCGA-A6-6648-01A 1 1 CDS-5'UTR Inter-chr q11.22 q23 88510 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD1-RGMB CHD1 chr5 98868495 - RGMB chr5 98793085 + Exonic hg38 COAD TCGA-A6-6648-01A 1 1 In-Frame Intra-chr q21.1 Tumor suppressor gene q15 Seq+ 88511 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMP2-UPF3B LAMP2 chrX 120469106 - UPF3B chrX 119851873 - Exonic hg38 COAD TCGA-A6-6650-01A 1 12 Out-of-frame Intra-chr q24 q24 88512 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRCA1-FAM134C BRCA1 chr17 43047643 - FAM134C chr17 42587864 - Exonic hg38 COAD TCGA-A6-6652-01A 2 3 Out-of-frame Intra-chr q21.31 Oncogene Tumor suppressor gene Seq+ 88513 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV6-APOLD1 ETV6 chr12 11650160 + APOLD1 chr12 12812261 + Exonic hg38 COAD TCGA-A6-6653-01A 2 21 CDS-3'UTR Intra-chr p13.2 Tumor suppressor gene Transcription factor p13.1 Seq+ 88514 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX13-PHF14 SNX13 chr7 17940284 - PHF14 chr7 11111350 + Exonic hg38 COAD TCGA-A6-6653-01A 1 1 Out-of-frame Intra-chr p21.1 p21.3 88515 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUNX1-PROS1 RUNX1 chr21 34834410 - PROS1 chr3 93927407 - Exonic hg38 COAD TCGA-A6-6654-01A 7 31 In-Frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q11.1 Seq+ 88516 ChimerSeq TCGA FAWG TCGA_RNA-Seq FMN1-COL22A1 FMN1 chr15 32964107 - COL22A1 chr8 138660480 - Exonic hg38 COAD TCGA-A6-6782-01A 1 4 5'UTR-CDS Inter-chr q24.3 88517 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCYL1-PACS1 SCYL1 chr11 65532805 + PACS1 chr11 66210362 + Exonic hg38 COAD TCGA-A6-A56B-01A 4 8 In-Frame Intra-chr q13.1 Other:SCY1 Tumor suppressor gene q13.1 88518 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUNX1-ZMAT4 RUNX1 chr21 34886843 - ZMAT4 chr8 40674931 - Exonic hg38 COAD TCGA-A6-A56B-01A 4 6 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor p11.21 Transcription factor Seq+ 88519 ChimerSeq TCGA FAWG TCGA_RNA-Seq COMMD9-CKAP5 COMMD9 chr11 36289362 - CKAP5 chr11 46790583 - Exonic hg38 COAD TCGA-A6-A56B-01A 1 2 In-Frame Intra-chr p13 p11.2 88520 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD2-DOT1L BTBD2 chr19 2013547 - DOT1L chr19 2226183 + Exonic hg38 COAD TCGA-AA-3511-01A 2 11 Out-of-frame Intra-chr p13.3 p13.3 Oncogene Transcription factor Seq+ 88521 ChimerSeq TCGA FAWG TCGA_RNA-Seq PYGB-CNBD2 PYGB chr20 25292613 + CNBD2 chr20 35987395 + Exonic hg38 COAD TCGA-AA-3660-01A 78 354 In-Frame Intra-chr p11.21 q11.23 Seq+ 88522 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRI3BP-IL22 BRI3BP chr12 124994003 + IL22 chr12 68253494 - Exonic hg38 COAD TCGA-AA-3660-01A 1 4 CDS-5'UTR Intra-chr q24.31 q15 Seq+ 88523 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPIDR-LAPTM4B SPIDR chr8 47599196 + LAPTM4B chr8 97851397 + Exonic hg38 COAD TCGA-AA-3662-01A 15 40 Out-of-frame Intra-chr q11.21 q22.1 88524 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPH3AL-ALOX15B RPH3AL chr17 319420 - ALOX15B chr17 8039386 + Exonic hg38 COAD TCGA-AA-3662-01A 6 18 5'UTR-5'UTR Intra-chr p13.1 Tumor suppressor gene Seq+ 88525 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOPEY1-RNF144B DOPEY1 chr6 83067779 + RNF144B chr6 18399499 + Exonic hg38 COAD TCGA-AA-3685-01A 4 8 Out-of-frame Intra-chr q14.1 p22.3 Seq+ 88526 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEX1-CDK6 PEX1 chr7 92528307 - CDK6 chr7 92725793 - Exonic hg38 COAD TCGA-AA-3697-01A 1 24 In-Frame Intra-chr q21.2 q21.2 CMGC:CDK Oncogene Tumor suppressor gene Seq+ 88527 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTBK2-ZNF106 TTBK2 chr15 42840360 - ZNF106 chr15 42417951 - Exonic hg38 COAD TCGA-AA-3697-01A 2 4 In-Frame Intra-chr q15.2 CK1:TTBK q15.1 88528 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP12-DIAPH3 USP12 chr13 27089883 - DIAPH3 chr13 60042820 - Exonic hg38 COAD TCGA-AA-3697-01A 1 1 Out-of-frame Intra-chr q12.13 Tumor suppressor gene q21.2 88529 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAN3-FLT3 PAN3 chr13 28177935 + FLT3 chr13 28070612 - Exonic hg38 COAD TCGA-AA-3712-01A 12 16 Out-of-frame Intra-chr q12.2 q12.2 TK:PDGFR Oncogene Tumor suppressor gene Seq+ 88530 ChimerSeq TCGA FAWG TCGA_RNA-Seq CWC25-LASP1 CWC25 chr17 38814861 - LASP1 chr17 38918605 + Exonic hg38 COAD TCGA-AA-A02K-01A 17 86 5'UTR-5'UTR Intra-chr q12 q12 Seq+ 88531 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK12-CACNB1 CDK12 chr17 39490733 + CACNB1 chr17 39191593 - Exonic hg38 COAD TCGA-AA-A02K-01A 8 27 Out-of-frame Intra-chr q12 Oncogene q12 Seq+ 88532 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAPER-CEP120 SCAPER chr15 76883812 - CEP120 chr5 123350089 - Exonic hg38 COAD TCGA-AA-A02K-01A 1 5 In-Frame Inter-chr q24.3 q23.2 Seq+ 88533 ChimerSeq TCGA FAWG TCGA_RNA-Seq DEAF1-HRAS DEAF1 chr11 680963 - HRAS chr11 532755 - Exonic hg38 COAD TCGA-AD-6888-01A 13 64 5'UTR-5'UTR Intra-chr Transcription factor p15.5 Oncogene Seq+ 88534 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC1-MARCH7 TANC1 chr2 159001189 + 2019_ 3_ 7_ chr2 159729009 + Exonic hg38 COAD TCGA-AD-6895-01A 2 6 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 88535 ChimerSeq TCGA FAWG TCGA_RNA-Seq CWC25-JUP CWC25 chr17 38825166 - JUP chr17 41758870 - Exonic hg38 COAD TCGA-AD-6899-01A 8 40 5'UTR-CDS Intra-chr q12 q21.2 Tumor suppressor gene Seq+ 88536 ChimerSeq TCGA FAWG TCGA_RNA-Seq HEPH-ZC3H12B HEPH chrX 66208246 + ZC3H12B chrX 65488646 + Exonic hg38 COAD TCGA-AD-6899-01A 4 43 5'UTR-5'UTR Intra-chr q12 q11.2 88537 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATE1-ANXA10 ATE1 chr10 121836718 - ANXA10 chr4 168139486 + Exonic hg38 COAD TCGA-AD-6899-01A 3 4 Out-of-frame Inter-chr q26.13 q32.3 Seq+ 88538 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF18-MAPKAP1 ARHGEF18 chr19 7442052 + MAPKAP1 chr9 125471415 - Exonic hg38 COAD TCGA-AD-6901-01A 3 36 CDS-3'UTR Inter-chr p13.2 q33.3 Seq+ 88539 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP3M2-PLAT AP3M2 chr8 42170059 + PLAT chr8 42176151 - Exonic hg38 COAD TCGA-AD-6901-01A 2 17 3'UTR-CDS Intra-chr p11.21 p11.21 88540 ChimerSeq TCGA FAWG TCGA_RNA-Seq VTI1A-TCF7L2 VTI1A chr10 112464657 + TCF7L2 chr10 113141184 + Exonic hg38 COAD TCGA-AD-6963-01A 4 5 In-Frame Intra-chr q25.2 q25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 88541 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC85C-SETD3 CCDC85C chr14 99603167 - SETD3 chr14 99465813 - Exonic hg38 COAD TCGA-AD-6964-01A 1 3 CDS-5'UTR Intra-chr q32.2 q32.2 88542 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCN2-THOC5 TCN2 chr22 30614501 + THOC5 chr22 29512136 - Exonic hg38 COAD TCGA-AD-6965-01A 6 10 In-Frame Intra-chr q12.2 q12.2 Seq+ 88543 ChimerSeq TCGA FAWG TCGA_RNA-Seq VTI1A-TCF7L2 VTI1A chr10 112464657 + TCF7L2 chr10 113141184 + Exonic hg38 COAD TCGA-AD-6965-01A 2 10 In-Frame Intra-chr q25.2 q25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 88544 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASP8AP2-HACE1 CASP8AP2 chr6 89857199 + HACE1 chr6 104730416 - Exonic hg38 COAD TCGA-AD-A5EJ-01A 6 18 3'UTR-3'UTR Intra-chr q15 q16.3 Tumor suppressor gene Seq+ 88545 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRHPR-ZCCHC7 GRHPR chr9 37432138 + ZCCHC7 chr9 37302188 + Exonic hg38 COAD TCGA-AD-A5EK-01A 1 3 In-Frame Intra-chr p13.2 p13.2 88546 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMD4B-SPTBN4 SAMD4B chr19 39348389 + SPTBN4 chr19 40572338 + Exonic hg38 COAD TCGA-AM-5820-01A 7 82 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 88547 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID5A-CNNM4 ARID5A chr2 96536830 + CNNM4 chr2 96797012 + Exonic hg38 COAD TCGA-AM-5820-01A 9 21 In-Frame Intra-chr q11.2 Transcription factor q11.2 Seq+ 88548 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHCHD3-ITPKA CHCHD3 chr7 132975169 - ITPKA chr15 41502402 + Exonic hg38 COAD TCGA-AM-5820-01A 3 31 In-Frame Inter-chr q33 Transcription factor q15.1 Seq+ 88549 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP6NL-LYZL1 USP6NL chr10 11597631 - LYZL1 chr10 29291843 + Exonic hg38 COAD TCGA-AM-5820-01A 1 1 CDS-5'UTR Intra-chr p14 p12.1 88550 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP1-CIR1 AGAP1 chr2 235807331 + CIR1 chr2 174387779 - Exonic hg38 COAD TCGA-AY-5543-01A 13 119 In-Frame Intra-chr q37.2 q31.1 Seq+ 88551 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A33-APIP SLC25A33 chr1 9553805 + APIP chr11 34883504 - Exonic hg38 COAD TCGA-AY-5543-01A 2 1 In-Frame Inter-chr p36.22 p13 Seq+ 88552 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0368-CARD19 KIAA0368 chr9 111383211 - CARD19 chr9 93107674 + Exonic hg38 COAD TCGA-AY-6196-01A 1 13 Out-of-frame Intra-chr q31.3 q22.31 88553 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG5-ADGRG6 ATG5 chr6 106308364 - ADGRG6 chr6 142414969 + Exonic hg38 COAD TCGA-AY-6196-01A 2 6 Out-of-frame Intra-chr q21 q24.2 88554 ChimerSeq TCGA FAWG TCGA_RNA-Seq CARD19-KIAA0368 CARD19 chr9 93107827 + KIAA0368 chr9 111390101 - Exonic hg38 COAD TCGA-AY-6196-01A 1 8 Out-of-frame Intra-chr q22.31 q31.3 88555 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L2-MAP4K1 EPB41L2 chr6 131063155 - MAP4K1 chr19 38587817 - Exonic hg38 COAD TCGA-AY-6196-01A 1 8 5'UTR-5'UTR Inter-chr q23.2 Tumor suppressor gene Seq+ 88556 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNA14-TNFSF8 GNA14 chr9 77647670 - TNFSF8 chr9 114918138 - Exonic hg38 COAD TCGA-AY-6196-01A 2 3 Out-of-frame Intra-chr q21.2 q33.1 Seq+ 88557 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPEP1-TCF25 DPEP1 chr16 89613719 + TCF25 chr16 89910591 + Exonic hg38 COAD TCGA-AY-A54L-01A 5 4 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 88558 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPHOSPH8-ATP8A2 MPHOSPH8 chr13 19633961 + ATP8A2 chr13 25961575 + Exonic hg38 COAD TCGA-AY-A54L-01A 1 5 In-Frame Intra-chr q12.11 q12.13 88559 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEK6-RASEF NEK6 chr9 124258085 + RASEF chr9 83001130 - Exonic hg38 COAD TCGA-AY-A71X-01A 3 3 5'UTR-CDS Intra-chr q33.3 Other:NEK q21.32 88560 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A11-RPTOR SLC39A11 chr17 73031556 - RPTOR chr17 80707841 + Exonic hg38 COAD TCGA-AY-A8YK-01A 4 22 In-Frame Intra-chr q25.1 q25.3 Seq+ 88561 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF2P1-CA10 SMURF2P1 chr17 30610942 + CA10 chr17 51747818 - Exonic hg38 COAD TCGA-AY-A8YK-01A 1 17 Out-of-frame Intra-chr q11.2 q22 88562 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCA-TMEM100 PRKCA chr17 66496283 + TMEM100 chr17 55727982 - Exonic hg38 COAD TCGA-AY-A8YK-01A 1 13 CDS-5'UTR Intra-chr q24.2 q22 Seq+ 88563 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK1-VMP1 TAOK1 chr17 29517656 + VMP1 chr17 59764971 + Exonic hg38 COAD TCGA-AZ-4323-01A 18 80 In-Frame Intra-chr q11.2 q23.1 Seq+ 88564 ChimerSeq TCGA FAWG TCGA_RNA-Seq MID1-DOCK11 MID1 chrX 10833554 - DOCK11 chrX 118662686 + Exonic hg38 COAD TCGA-AZ-4323-01A 7 37 5'UTR-CDS Intra-chr p22.2 q24 Seq+ 88565 ChimerSeq TCGA FAWG TCGA_RNA-Seq VMP1-6 VMP1 chr17 59738947 + 6 chr17 41140448 - Exonic hg38 COAD TCGA-AZ-4323-01A 3 39 5'UTR-5'UTR Intra-chr q23.1 88566 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX13-AUTS2 SNX13 chr7 17796827 - AUTS2 chr7 70290368 + Exonic hg38 COAD TCGA-AZ-4323-01A 3 5 Out-of-frame Intra-chr p21.1 q11.22 Seq+ 88567 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGSF3-SYCP1 IGSF3 chr1 116666284 - SYCP1 chr1 114947246 + Exonic hg38 COAD TCGA-AZ-4323-01A 1 9 Out-of-frame Intra-chr p13.1 p13.2 Seq+ 88568 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR160-SFXN5 GPR160 chr3 170039043 + SFXN5 chr2 73000487 - Exonic hg38 COAD TCGA-AZ-4684-01A 1 6 5'UTR-5'UTR Inter-chr q26.2 p13.2 88569 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACYP2-EML6 ACYP2 chr2 53973810 + EML6 chr2 54899641 + Exonic hg38 COAD TCGA-AZ-6599-01A 2 9 Out-of-frame Intra-chr p16.2 p16.1 Seq+ 88570 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYBU-NUDCD1 SYBU chr8 109586060 - NUDCD1 chr8 109245481 - Exonic hg38 COAD TCGA-AZ-6600-01A 9 17 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 88571 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-POLDIP2 NF1 chr17 31265339 + POLDIP2 chr17 28355876 - Exonic hg38 COAD TCGA-AZ-6600-01A 2 3 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 88572 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK1D-SECTM1 CSNK1D chr17 82265686 - SECTM1 chr17 82323011 - Exonic hg38 COAD TCGA-AZ-6601-01A 11 36 In-Frame Intra-chr q25.3 q25.3 Seq+ 88573 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFXL1-COPS4 NFXL1 chr4 47890613 - COPS4 chr4 83049166 + Exonic hg38 COAD TCGA-AZ-6601-01A 1 14 In-Frame Intra-chr p12 Transcription factor q21.22 Seq+ 88574 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPS4-NFXL1 COPS4 chr4 83045705 + NFXL1 chr4 47885999 - Exonic hg38 COAD TCGA-AZ-6601-01A 1 6 In-Frame Intra-chr q21.22 p12 Transcription factor 88575 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACE2-GPR143 ACE2 chrX 15578089 - GPR143 chrX 9725840 - Exonic hg38 COAD TCGA-AZ-6605-01A 31 142 In-Frame Intra-chr p22.2 p22.2 Seq+ 88576 ChimerSeq TCGA FAWG TCGA_RNA-Seq POMK-CHRNA6 POMK chr8 43103830 + CHRNA6 chr8 42765204 - Exonic hg38 COAD TCGA-AZ-6606-01A 17 31 Out-of-frame Intra-chr p11.21 p11.21 88577 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3RF1-SPOCK3 SH3RF1 chr4 169136318 - SPOCK3 chr4 166889244 - Exonic hg38 COAD TCGA-AZ-6607-01A 6 22 In-Frame Intra-chr q33 q32.3 Seq+ 88578 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRF2-C8orf86 BRF2 chr8 37848596 - C8orf86 chr8 38512639 - Exonic hg38 COAD TCGA-AZ-6607-01A 3 12 Out-of-frame Intra-chr p11.23 Tumor suppressor gene Transcription factor p11.22 Seq+ 88579 ChimerSeq TCGA FAWG TCGA_RNA-Seq BICDL1-KCNK1 BICDL1 chr12 119998736 + KCNK1 chr1 233666595 + Exonic hg38 COAD TCGA-AZ-6607-01A 3 3 Out-of-frame Inter-chr q24.23 q42.2 88580 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNK1-BICDL1 KCNK1 chr1 233614526 + BICDL1 chr12 120061694 + Exonic hg38 COAD TCGA-AZ-6607-01A 1 5 CDS-5'UTR Inter-chr q42.2 q24.23 88581 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFP36L2-C8orf86 ZFP36L2 chr8 37848596 - C8orf86 chr8 38512639 - Exonic hg38 COAD TCGA-AZ-6607-01A 1000 1000 3'UTR-3'UTR Intra-chr p21 Tumor suppressor gene p11.22 88582 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRHL2-MATN2 GRHL2 chr8 101649499 + MATN2 chr8 97978886 + Exonic hg38 COAD TCGA-AZ-6608-01A 4 5 Out-of-frame Intra-chr q22.3 Transcription factor q22.1 Seq+ 88583 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLTC-CEP95 CLTC chr17 59661643 + CEP95 chr17 64536602 + Exonic hg38 COAD TCGA-CA-5254-01A 43 235 In-Frame Intra-chr q23.1 q23.3 Seq+ 88584 ChimerSeq TCGA FAWG TCGA_RNA-Seq MXI1-TMEM254 MXI1 chr10 110208082 + TMEM254 chr10 80081841 + Exonic hg38 COAD TCGA-CA-5254-01A 11 40 Out-of-frame Intra-chr q25.2 Tumor suppressor gene Transcription factor q22.3 Seq+ 88585 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFIT5-HK1 IFIT5 chr10 89414803 + HK1 chr10 69343827 + Exonic hg38 COAD TCGA-CA-5254-01A 10 10 Out-of-frame Intra-chr q23.31 q22.1 Seq+ 88586 ChimerSeq TCGA FAWG TCGA_RNA-Seq GBF1-NT5C2 GBF1 chr10 102260116 + NT5C2 chr10 103106706 - Exonic hg38 COAD TCGA-CA-5254-01A 4 32 In-Frame Intra-chr q24.32 q24.33 Seq+ 88587 ChimerSeq TCGA FAWG TCGA_RNA-Seq RICTOR-ISL1 RICTOR chr5 39074111 - ISL1 chr5 51384541 + Exonic hg38 COAD TCGA-CA-5254-01A 2 6 In-Frame Intra-chr p13.1 q11.1 Transcription factor Seq+ 88588 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNDP2-NPC1 CNDP2 chr18 74506011 + NPC1 chr18 23506642 - Exonic hg38 COAD TCGA-CA-5256-01A 31 128 CDS-3'UTR Intra-chr q22.3 Tumor suppressor gene q11.2 88589 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOOK3-TGS1 HOOK3 chr8 42906258 + TGS1 chr8 55782748 + Exonic hg38 COAD TCGA-CA-6715-01A 5 11 In-Frame Intra-chr p11.21 Oncogene q12.1 Tumor suppressor gene Seq+ 88590 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF213-SLC26A11 RNF213 chr17 80350396 + SLC26A11 chr17 80251329 + Exonic hg38 COAD TCGA-CA-6716-01A 4 13 Out-of-frame Intra-chr q25.3 Oncogene q25.3 Pub Seq+ 88591 ChimerSeq TCGA FAWG TCGA_RNA-Seq KPNA3-DLEU2 KPNA3 chr13 49705621 - DLEU2 chr13 49997419 - Exonic hg38 COAD TCGA-CA-6716-01A 3 5 CDS-3'UTR Intra-chr q14.2 q14.2 Tumor suppressor gene Seq+ 88592 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPEP1-TCF25 DPEP1 chr16 89630514 + TCF25 chr16 89910591 + Exonic hg38 COAD TCGA-CK-4947-01B 1 8 In-Frame Intra-chr q24.3 q24.3 Seq+ 88593 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 11869969 + NTRK3 chr15 87940753 - Exonic hg38 COAD TCGA-CK-5913-01A 14 41 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 88594 ChimerSeq TCGA FAWG TCGA_RNA-Seq PXDN-MYT1L PXDN chr2 1744256 - MYT1L chr2 1840843 - Exonic hg38 COAD TCGA-CK-5913-01A 2 2 In-Frame Intra-chr p25.3 p25.3 Transcription factor Seq+ 88595 ChimerSeq TCGA FAWG TCGA_RNA-Seq MVP-TMEM219 MVP chr16 29820510 + TMEM219 chr16 29968025 + Exonic hg38 COAD TCGA-CK-5915-01A 15 8 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 88596 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 11869969 + NTRK3 chr15 87940753 - Exonic hg38 COAD TCGA-CK-5916-01A 5 15 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 88597 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPEP1-TCF25 DPEP1 chr16 89613719 + TCF25 chr16 89910591 + Exonic hg38 COAD TCGA-CK-6751-01A 1 9 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 88598 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE10A-SMOC2 PDE10A chr6 165431422 - SMOC2 chr6 168673213 + Exonic hg38 COAD TCGA-CM-4743-01A 14 8 CDS-3'UTR Intra-chr q27 q27 88599 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 59906122 - RET chr10 43116584 + Exonic hg38 COAD TCGA-CM-4743-01A 5 20 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 88600 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPCAT2-DNAJA2 LPCAT2 chr16 55509352 + DNAJA2 chr16 46957220 - Exonic hg38 COAD TCGA-CM-4743-01A 4 4 In-Frame Intra-chr q12.2 q11.2 Seq+ 88601 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJA2-LPCAT2 DNAJA2 chr16 46959003 - LPCAT2 chr16 55528377 + Exonic hg38 COAD TCGA-CM-4743-01A 1 4 Out-of-frame Intra-chr q11.2 q12.2 Seq+ 88602 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP5A1-HAUS1 ATP5A1 chr18 46104137 - HAUS1 chr18 46118181 + Exonic hg38 COAD TCGA-CM-5348-01A 3 25 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 88603 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPH6-SHC4 DPH6 chr15 35546119 - SHC4 chr15 48835022 - Exonic hg38 COAD TCGA-CM-5348-01A 8 3 Out-of-frame Intra-chr q14 q21.1 Seq+ 88604 ChimerSeq TCGA FAWG TCGA_RNA-Seq YWHAE-ERCC8 YWHAE chr17 1400047 - ERCC8 chr5 60928959 - Exonic hg38 COAD TCGA-CM-5348-01A 6 11 5'UTR-5'UTR Inter-chr p13.3 q12.1 Seq+ 88605 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLN2-LACTB TLN2 chr15 62589762 + LACTB chr15 63122636 + Exonic hg38 COAD TCGA-CM-5348-01A 4 17 5'UTR-CDS Intra-chr q22.2 q22.2 Seq+ 88606 ChimerSeq TCGA FAWG TCGA_RNA-Seq OPN3-FH OPN3 chr1 241639882 - FH chr1 241517316 - Exonic hg38 COAD TCGA-CM-5348-01A 5 8 Out-of-frame Intra-chr q43 q43 Oncogene Tumor suppressor gene Seq+ 88607 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLCO3A1-DPH6 SLCO3A1 chr15 92126259 + DPH6 chr15 35542507 - Exonic hg38 COAD TCGA-CM-5348-01A 4 10 In-Frame Intra-chr q26.1 q14 Seq+ 88608 ChimerSeq TCGA FAWG TCGA_RNA-Seq C15orf41-SLCO3A1 C15orf41 chr15 36579961 + SLCO3A1 chr15 92120465 + Exonic hg38 COAD TCGA-CM-5348-01A 2 12 Out-of-frame Intra-chr q14 q26.1 Seq+ 88609 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM170A-NUP93 TMEM170A chr16 75464232 - NUP93 chr16 56805504 + Exonic hg38 COAD TCGA-CM-5349-01A 1 42 Out-of-frame Intra-chr q23.1 q13 Seq+ 88610 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIVEP2-SMAP1 HIVEP2 chr6 142945944 - SMAP1 chr6 70798657 + Exonic hg38 COAD TCGA-CM-5349-01A 1 19 5'UTR-CDS Intra-chr q24.2 Transcription factor q13 88611 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABHD12-PPP2R2A ABHD12 chr20 25314925 - PPP2R2A chr8 26338890 + Exonic hg38 COAD TCGA-CM-5860-01A 11 43 In-Frame Inter-chr p11.21 p21.2 Seq+ 88612 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFAT5-VPS4A NFAT5 chr16 69566374 + VPS4A chr16 69316008 + Exonic hg38 COAD TCGA-CM-5860-01A 4 11 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 88613 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPALPP1-VWA8 GPALPP1 chr13 45008879 + VWA8 chr13 41568305 - Exonic hg38 COAD TCGA-CM-5862-01A 59 230 Out-of-frame Intra-chr q14.12 q14.11 Seq+ 88614 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPALPP1-MIR5006 GPALPP1 chr13 45008879 + MIR5006 chr13 41568305 - Exonic hg38 COAD TCGA-CM-5862-01A 59 55 CDS-3'UTR Intra-chr q14.12 q14.11 Seq+ 88615 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLBD1-GRIN2B PLBD1 chr12 14567582 - GRIN2B chr12 13981576 - Exonic hg38 COAD TCGA-CM-5862-01A 2 2 CDS-5'UTR Intra-chr p13.1 p13.1 88616 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO6-PEBP4 ANO6 chr12 45216391 + PEBP4 chr8 22817735 - Exonic hg38 COAD TCGA-CM-5868-01A 2 9 Out-of-frame Inter-chr q12 p21.3 Seq+ 88617 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFXN5-DYNLL2 SFXN5 chr2 73040854 - DYNLL2 chr17 58089142 + Exonic hg38 COAD TCGA-CM-5868-01A 1 4 In-Frame Inter-chr p13.2 q22 88618 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP3-ABR SENP3 chr17 7567004 + ABR chr17 1058867 - Exonic hg38 COAD TCGA-CM-6163-01A 15 41 CDS-5'UTR Intra-chr p13.1 p13.3 Seq+ 88619 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKIV2L2-PCDHGA10 SKIV2L2 chr5 55328811 + PCDHGA10 chr5 141494807 + Exonic hg38 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 Seq+ 88620 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKIV2L2-PCDHGA11 SKIV2L2 chr5 55328811 + PCDHGA11 chr5 141494807 + Exonic hg38 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 Seq+ 88621 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKIV2L2-PCDHGA12 SKIV2L2 chr5 55328811 + PCDHGA12 chr5 141494807 + Exonic hg38 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 Seq+ 88622 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKIV2L2-PCDHGA8 SKIV2L2 chr5 55328811 + PCDHGA8 chr5 141494807 + Exonic hg38 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 Seq+ 88623 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKIV2L2-PCDHGA9 SKIV2L2 chr5 55328811 + PCDHGA9 chr5 141494807 + Exonic hg38 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 Seq+ 88624 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKIV2L2-PCDHGB5 SKIV2L2 chr5 55328811 + PCDHGB5 chr5 141494807 + Exonic hg38 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 Seq+ 88625 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKIV2L2-PCDHGB6 SKIV2L2 chr5 55328811 + PCDHGB6 chr5 141494807 + Exonic hg38 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 Seq+ 88626 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKIV2L2-PCDHGB7 SKIV2L2 chr5 55328811 + PCDHGB7 chr5 141494807 + Exonic hg38 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 Seq+ 88627 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKIV2L2-PCDHGC3 SKIV2L2 chr5 55328811 + PCDHGC3 chr5 141494807 + Exonic hg38 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 Tumor suppressor gene Seq+ 88628 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKIV2L2-PCDHGC4 SKIV2L2 chr5 55328811 + PCDHGC4 chr5 141494807 + Exonic hg38 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 Seq+ 88629 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKIV2L2-PCDHGC5 SKIV2L2 chr5 55328811 + PCDHGC5 chr5 141494807 + Exonic hg38 COAD TCGA-CM-6163-01A 16 37 Out-of-frame Intra-chr q11.2 q31.3 Seq+ 88630 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF16B-SNX5 KIF16B chr20 16526092 - SNX5 chr20 17943195 - Exonic hg38 COAD TCGA-CM-6164-01A 8 14 Out-of-frame Intra-chr p12.1 p11.23 Seq+ 88631 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF170-ADAM32 RNF170 chr8 42887728 - ADAM32 chr8 39221610 + Exonic hg38 COAD TCGA-CM-6166-01A 2 8 3'UTR-3'UTR Intra-chr p11.21 Seq+ 88632 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLF11-TMEM247 KLF11 chr2 10046419 + TMEM247 chr2 46484244 + Exonic hg38 COAD TCGA-CM-6167-01A 5 25 Out-of-frame Intra-chr p25.1 Transcription factor p21 Seq+ 88633 ChimerSeq TCGA FAWG TCGA_RNA-Seq CARM1-KLF11 CARM1 chr19 10871922 + KLF11 chr2 10047650 + Exonic hg38 COAD TCGA-CM-6167-01A 1 3 Out-of-frame Inter-chr p13.2 p25.1 Transcription factor Seq+ 88634 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITCH-MANBAL ITCH chr20 34408792 + MANBAL chr20 37316308 + Exonic hg38 COAD TCGA-CM-6170-01A 4 7 Out-of-frame Intra-chr q11.22 q11.23 Seq+ 88635 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERINC3-WFDC11 SERINC3 chr20 44509891 - WFDC11 chr20 45650651 - Exonic hg38 COAD TCGA-CM-6170-01A 3 5 CDS-5'UTR Intra-chr q13.12 q13.12 Seq+ 88636 ChimerSeq TCGA FAWG TCGA_RNA-Seq HM13-ZBTB46 HM13 chr20 31550121 + ZBTB46 chr20 63775962 - Exonic hg38 COAD TCGA-CM-6170-01A 2 6 In-Frame Intra-chr q11.21 q13.33 Transcription factor Seq+ 88637 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF107-FOXP2 ZNF107 chr7 64691960 + FOXP2 chr7 114162944 + Exonic hg38 COAD TCGA-CM-6170-01A 2 4 CDS-5'UTR Intra-chr q11.21 Transcription factor q31.1 Transcription factor Seq+ 88638 ChimerSeq TCGA FAWG TCGA_RNA-Seq VTI1A-TCF7L2 VTI1A chr10 112464657 + TCF7L2 chr10 113141184 + Exonic hg38 COAD TCGA-CM-6170-01A 1 1 In-Frame Intra-chr q25.2 q25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 88639 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC12A2-C5orf58 SLC12A2 chr5 128188323 + C5orf58 chr5 170233260 + Exonic hg38 COAD TCGA-CM-6170-01A 1000 1000 Out-of-frame Intra-chr q23.3 q35.1 Seq+ 88640 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFX-GLYATL2 ZFX chrX 24152830 + GLYATL2 chr11 58844524 - Exonic hg38 COAD TCGA-CM-6172-01A 33 153 5'UTR-5'UTR Inter-chr p22.11 Transcription factor q12.1 Seq+ 88641 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD7-TOX CHD7 chr8 60743097 + TOX chr8 58960008 - Exonic hg38 COAD TCGA-CM-6172-01A 18 83 In-Frame Intra-chr q12.2 q12.1 Seq+ 88642 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTP4A3-DKFZP434K028 PTP4A3 chr8 141427824 + DKFZP434K028 chr11 61755696 - Exonic hg38 COAD TCGA-CM-6172-01A 13 17 Out-of-frame Inter-chr q24.3 q12.2 Seq+ 88643 ChimerSeq TCGA FAWG TCGA_RNA-Seq RORA-ICE2 RORA chr15 60592387 - ICE2 chr15 60442545 - Exonic hg38 COAD TCGA-CM-6172-01A 1 4 Out-of-frame Intra-chr q22.2 Transcription factor q22.2 88644 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX6-ADAMTS12 SNX6 chr14 34629907 - ADAMTS12 chr5 33751548 - Exonic hg38 COAD TCGA-CM-6172-01A 1 3 In-Frame Inter-chr q13.1 p13.2 88645 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13L-PTPRR MED13L chr12 116096669 - PTPRR chr12 70764778 - Exonic hg38 COAD TCGA-CM-6675-01A 1 33 Out-of-frame Intra-chr q24.21 q15 Seq+ 88646 ChimerSeq TCGA FAWG TCGA_RNA-Seq WBSCR22-LIMK1 WBSCR22 chr7 73697694 + LIMK1 chr7 74105875 + Exonic hg38 COAD TCGA-CM-6675-01A 3 8 Out-of-frame Intra-chr q11.23 TKL:LISK Seq+ 88647 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0319L-LRRIQ1 KIAA0319L chr1 35460305 - LRRIQ1 chr12 85262915 + Exonic hg38 COAD TCGA-CM-6677-01A 3 8 CDS-3'UTR Inter-chr p34.3 q21.31 88648 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2IRD1-RHBDD2 GTF2IRD1 chr7 74524154 + RHBDD2 chr7 75881365 + Exonic hg38 COAD TCGA-CM-6677-01A 1 5 CDS-5'UTR Intra-chr q11.23 Transcription factor q11.23 Seq+ 88649 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPEP1-TCF25 DPEP1 chr16 89613719 + TCF25 chr16 89910591 + Exonic hg38 COAD TCGA-CM-6680-01A 5 7 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 88650 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM1-RNF207 PUM1 chr1 30980062 - RNF207 chr1 6206176 + Exonic hg38 COAD TCGA-D5-5537-01A 7 10 CDS-5'UTR Intra-chr p35.2 p36.31 Seq+ 88651 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNQ1-GALNTL6 KCNQ1 chr11 2778037 + GALNTL6 chr4 173009178 + Exonic hg38 COAD TCGA-D5-5538-01A 10 36 3'UTR-CDS Inter-chr p15.5 q34.1 Seq+ 88652 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAT1-NPY1R FAT1 chr4 186726354 - NPY1R chr4 163326705 - Exonic hg38 COAD TCGA-D5-5538-01A 1 3 5'UTR-5'UTR Intra-chr q35.2 Tumor suppressor gene q32.2 Seq+ 88653 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERPINE2-FARSB SERPINE2 chr2 223984752 - FARSB chr2 222572022 - Exonic hg38 COAD TCGA-D5-5539-01A 38 129 Out-of-frame Intra-chr q36.1 q36.1 Seq+ 88654 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP13A3-DNAJC13 ATP13A3 chr3 194485794 - DNAJC13 chr3 132500794 + Exonic hg38 COAD TCGA-D5-5540-01A 6 25 5'UTR-CDS Intra-chr q29 q22.1 Seq+ 88655 ChimerSeq TCGA FAWG TCGA_RNA-Seq RGS19-RPSAP18 RGS19 chr20 64074000 - RPSAP18 chr1 160266614 - Exonic hg38 COAD TCGA-D5-5541-01A 3 27 Out-of-frame Inter-chr q13.33 q23.2 88656 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCB1-SMOX PLCB1 chr20 8733392 + SMOX chr20 4120980 + Exonic hg38 COAD TCGA-D5-5541-01A 1 5 CDS-5'UTR Intra-chr p12.3 p13 88657 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF1-TMEM120A ARHGEF1 chr19 41896482 + TMEM120A chr7 75988516 - Exonic hg38 COAD TCGA-D5-6529-01A 1 2 In-Frame Inter-chr q13.2 q11.23 88658 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM122B-PCBP2 FAM122B chrX 134797121 - PCBP2 chr12 53454726 + Exonic hg38 COAD TCGA-D5-6529-01A 1 1 5'UTR-5'UTR Inter-chr q26.3 q13.13 88659 ChimerSeq TCGA FAWG TCGA_RNA-Seq C6orf222-ETV7 C6orf222 chr6 36325283 - ETV7 chr6 36354687 - Exonic hg38 COAD TCGA-D5-6530-01A 26 250 Out-of-frame Intra-chr p21.31 p21.31 Transcription factor Seq+ 88660 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-DNAJC7 ERBB2 chr17 39688278 + DNAJC7 chr17 41982401 - Exonic hg38 COAD TCGA-D5-6531-01A 6 40 5'UTR-CDS Intra-chr q12 Oncogene q21.2 Seq+ 88661 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABHD16A-CLIC1 ABHD16A chr6 31700942 - CLIC1 chr6 31732398 - Exonic hg38 COAD TCGA-D5-6531-01A 2 13 5'UTR-5'UTR Intra-chr Seq+ 88662 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPX2-REM1 TPX2 chr20 31760179 + REM1 chr20 31484159 + Exonic hg38 COAD TCGA-D5-6531-01A 3 5 In-Frame Intra-chr q11.21 q11.21 Seq+ 88663 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAE1-FGF9 SAE1 chr19 47143605 + FGF9 chr13 21701190 + Exonic hg38 COAD TCGA-D5-6533-01A 2 4 In-Frame Inter-chr q13.32 q12.11 Seq+ 88664 ChimerSeq TCGA FAWG TCGA_RNA-Seq IPO8-TMTC1 IPO8 chr12 30695564 - TMTC1 chr12 29536317 - Exonic hg38 COAD TCGA-D5-6533-01A 2 3 Out-of-frame Intra-chr p11.21 p11.22 Seq+ 88665 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARL8B-USP4 ARL8B chr3 5122588 + USP4 chr3 49302542 - Exonic hg38 COAD TCGA-D5-6534-01A 9 29 In-Frame Intra-chr p26.1 p21.31 Seq+ 88666 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM216-KCNG3 TMEM216 chr11 61393332 + KCNG3 chr2 42444579 - Exonic hg38 COAD TCGA-D5-6534-01A 2 8 Out-of-frame Inter-chr q12.2 p21 Seq+ 88667 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP4-SCRIB USP4 chr3 49324702 - SCRIB chr8 143795530 - Exonic hg38 COAD TCGA-D5-6534-01A 2 6 CDS-5'UTR Inter-chr p21.31 Tumor suppressor gene Seq+ 88668 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFX3-TFDP1 RFX3 chr9 3525747 - TFDP1 chr13 113610996 + Exonic hg38 COAD TCGA-D5-6536-01A 1 25 5'UTR-5'UTR Inter-chr p24.2 Transcription factor q34 Transcription factor Seq+ 88669 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANK3-ACTA2 ANK3 chr10 60615186 - ACTA2 chr10 88938242 - Exonic hg38 COAD TCGA-D5-6536-01A 1 15 Out-of-frame Intra-chr q21.2 q23.31 Seq+ 88670 ChimerSeq TCGA FAWG TCGA_RNA-Seq REG3A-SERPINA1 REG3A chr2 79158648 - SERPINA1 chr14 94381141 - Exonic hg38 COAD TCGA-D5-6536-01A 1 8 CDS-5'UTR Inter-chr p12 q32.13 88671 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRPF3-KCTD20 BRPF3 chr6 36225364 + KCTD20 chr6 36470052 + Exonic hg38 COAD TCGA-D5-6539-01A 1 5 CDS-5'UTR Intra-chr p21.31 p21.31 88672 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF1-TMEM120A ARHGEF1 chr19 41896482 + TMEM120A chr7 75988516 - Exonic hg38 COAD TCGA-D5-6541-01A 1 4 In-Frame Inter-chr q13.2 q11.23 88673 ChimerSeq TCGA FAWG TCGA_RNA-Seq CANT1-MROH1 CANT1 chr17 79009664 - MROH1 chr8 144220600 + Exonic hg38 COAD TCGA-D5-6541-01A 1 2 5'UTR-CDS Inter-chr q25.3 q24.3 88674 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLLT10-ASCC1 MLLT10 chr10 21617207 + ASCC1 chr10 72133181 - Exonic hg38 COAD TCGA-D5-6922-01A 1 13 Out-of-frame Intra-chr p12.31 Oncogene q22.1 Seq+ 88675 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0319L-GNB1 KIAA0319L chr1 35462621 - GNB1 chr1 1839238 - Exonic hg38 COAD TCGA-D5-6922-01A 1 12 CDS-5'UTR Intra-chr p34.3 p36.33 88676 ChimerSeq TCGA FAWG TCGA_RNA-Seq OPN3-FH OPN3 chr1 241639882 - FH chr1 241517316 - Exonic hg38 COAD TCGA-D5-6923-01A 1 2 Out-of-frame Intra-chr q43 q43 Oncogene Tumor suppressor gene Seq+ 88677 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNL2-MRPL20 CCNL2 chr1 1398233 - MRPL20 chr1 1402256 - Exonic hg38 COAD TCGA-D5-6924-01A 42 89 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 88678 ChimerSeq TCGA FAWG TCGA_RNA-Seq NNT-PRLR NNT chr5 43628387 + PRLR chr5 35072744 - Exonic hg38 COAD TCGA-D5-6924-01A 1 3 In-Frame Intra-chr p12 p13.2 Seq+ 88679 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD3-ADAM18 NSD3 chr8 38279540 - ADAM18 chr8 39729898 + Exonic hg38 COAD TCGA-D5-6926-01A 74 103 CDS-3'UTR Intra-chr p11.23 Tumor suppressor gene 88680 ChimerSeq TCGA FAWG TCGA_RNA-Seq CKAP2-SMCO2 CKAP2 chr13 52474084 + SMCO2 chr12 27501923 + Exonic hg38 COAD TCGA-D5-6926-01A 1 8 In-Frame Inter-chr q14.3 p11.23 88681 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF24-ACAA2 ZNF24 chr18 35344370 - ACAA2 chr18 49795881 - Exonic hg38 COAD TCGA-D5-6929-01A 62 159 5'UTR-CDS Intra-chr q12.2 Transcription factor q21.1 Seq+ 88682 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNA13-ASPSCR1 GNA13 chr17 65053502 - ASPSCR1 chr17 82009037 + Exonic hg38 COAD TCGA-D5-6929-01A 31 112 In-Frame Intra-chr q24.1 q25.3 Seq+ 88683 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKAR1A-PITPNC1 PRKAR1A chr17 68515576 + PITPNC1 chr17 67532802 + Exonic hg38 COAD TCGA-D5-6929-01A 13 73 In-Frame Intra-chr q24.2 Oncogene Tumor suppressor gene q24.2 Seq+ 88684 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT9-METTL2A SEPT9 chr17 77451528 + METTL2A chr17 62444837 + Exonic hg38 COAD TCGA-D5-6929-01A 9 16 Out-of-frame Intra-chr q23.2 Seq+ 88685 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPGS2-DSG1 TPGS2 chr18 36818894 - DSG1 chr18 31326581 + Exonic hg38 COAD TCGA-D5-6929-01A 6 22 In-Frame Intra-chr q12.2 q12.1 Seq+ 88686 ChimerSeq TCGA FAWG TCGA_RNA-Seq SP6-IGKJ1 SP6 chr17 47847039 - IGKJ1 chr2 88861917 - Exonic hg38 COAD TCGA-D5-6929-01A 8 0 Out-of-frame Inter-chr q21.32 Transcription factor p11.2 88687 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACACA-GSDMB ACACA chr17 37270751 - GSDMB chr17 39912497 - Exonic hg38 COAD TCGA-D5-6929-01A 2 14 5'UTR-CDS Intra-chr q21.1 Seq+ 88688 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM1L-TSPAN11 DNM1L chr12 32679465 + TSPAN11 chr12 30953981 + Exonic hg38 COAD TCGA-D5-6929-01A 2 13 5'UTR-5'UTR Intra-chr p11.21 p11.21 Seq+ 88689 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB40B-TAF15 RAB40B chr17 82698455 - TAF15 chr17 35838424 + Exonic hg38 COAD TCGA-D5-6929-01A 3 5 CDS-3'UTR Intra-chr q25.3 q12 Seq+ 88690 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO18A-MYO1D MYO18A chr17 29082316 - MYO1D chr17 32494915 - Exonic hg38 COAD TCGA-D5-6929-01A 2 3 In-Frame Intra-chr q11.2 Oncogene q11.2 88691 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP32-STXBP4 USP32 chr17 60181324 - STXBP4 chr17 55072900 + Exonic hg38 COAD TCGA-D5-6929-01A 2 3 In-Frame Intra-chr q23.2 q22 Seq+ 88692 ChimerSeq TCGA FAWG TCGA_RNA-Seq YBX3-ATF7IP YBX3 chr12 10713211 - ATF7IP chr12 14423909 + Exonic hg38 COAD TCGA-D5-6929-01A 1 6 Out-of-frame Intra-chr p13.2 Transcription factor p13.1 88693 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTNA-LDLRAD4 DTNA chr18 34493514 + LDLRAD4 chr18 13621117 + Exonic hg38 COAD TCGA-D5-6929-01A 1 5 5'UTR-5'UTR Intra-chr q12.1 p11.21 88694 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRNAU1AP-PTPRU TRNAU1AP chr1 28553737 + PTPRU chr1 29291869 + Exonic hg38 COAD TCGA-D5-6931-01A 9 26 In-Frame Intra-chr p35.3 p35.3 Seq+ 88695 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANTXR2-OR7E94P ANTXR2 chr4 80031623 - OR7E94P chr4 79588090 - Exonic hg38 COAD TCGA-D5-6932-01A 10 25 Out-of-frame Intra-chr q21.21 q21.21 88696 ChimerSeq TCGA FAWG TCGA_RNA-Seq REL-KIAA1841 REL chr2 60918606 + KIAA1841 chr2 61115979 + Exonic hg38 COAD TCGA-D5-6932-01A 3 33 In-Frame Intra-chr p16.1 Oncogene Transcription factor p15 Seq+ 88697 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSP-HDLBP DSP chr6 7575488 + HDLBP chr2 241230944 - Exonic hg38 COAD TCGA-DM-A0X9-01A 2 43 Out-of-frame Inter-chr p24.3 Tumor suppressor gene q37.3 Seq+ 88698 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDLBP-DSP HDLBP chr2 241233820 - DSP chr6 7576294 + Exonic hg38 COAD TCGA-DM-A0X9-01A 2 18 Out-of-frame Inter-chr q37.3 p24.3 Tumor suppressor gene Seq+ 88699 ChimerSeq TCGA FAWG TCGA_RNA-Seq DZANK1-DTD1 DZANK1 chr20 18427067 - DTD1 chr20 18744100 + Exonic hg38 COAD TCGA-DM-A0XD-01A 2 24 In-Frame Intra-chr p11.23 p11.23 Seq+ 88700 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNQ1-SCT KCNQ1 chr11 2528018 + SCT chr11 626530 - Exonic hg38 COAD TCGA-DM-A0XF-01A 90 298 3'UTR-5'UTR Intra-chr p15.5 Seq+ 88701 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2CA-VDAC1 PPP2CA chr5 134225760 - VDAC1 chr5 133973848 - Exonic hg38 COAD TCGA-DM-A0XF-01A 43 209 In-Frame Intra-chr q31.1 Tumor suppressor gene q31.1 Seq+ 88702 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDAH1-TRABD2B DDAH1 chr1 85464743 - TRABD2B chr1 47801619 - Exonic hg38 COAD TCGA-DM-A0XF-01A 4 18 In-Frame Intra-chr p22.3 p33 Seq+ 88703 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXO3-GMDS FOXO3 chr6 108561829 + GMDS chr6 1960966 - Exonic hg38 COAD TCGA-DM-A0XF-01A 3 7 In-Frame Intra-chr q21 Oncogene Tumor suppressor gene Transcription factor p25.3 Seq+ 88704 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMP7-EEF1A2 BMP7 chr20 57265705 - EEF1A2 chr20 63497834 - Exonic hg38 COAD TCGA-DM-A0XF-01A 2 6 CDS-5'UTR Intra-chr q13.31 q13.33 Seq+ 88705 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBTF-CA10 UBTF chr17 44209352 - CA10 chr17 51931132 - Exonic hg38 COAD TCGA-DM-A0XF-01A 1 10 Out-of-frame Intra-chr q21.31 q22 Seq+ 88706 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMC1-ZCWPW2 CMC1 chr3 28263380 + ZCWPW2 chr3 28492127 + Exonic hg38 COAD TCGA-DM-A0XF-01A 1 9 In-Frame Intra-chr p24.1 p24.1 Seq+ 88707 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2CA-C5orf15 PPP2CA chr5 134225760 - C5orf15 chr5 133960020 - Exonic hg38 COAD TCGA-DM-A0XF-01A 1 7 Out-of-frame Intra-chr q31.1 Tumor suppressor gene q31.1 88708 ChimerSeq TCGA FAWG TCGA_RNA-Seq OTUB1-KMT5B OTUB1 chr11 64001520 + KMT5B chr11 68171709 - Exonic hg38 COAD TCGA-DM-A1D0-01A 14 183 3'UTR-3'UTR Intra-chr q13.1 q13.2 88709 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHM3-MAP2 PLEKHM3 chr2 208025389 - MAP2 chr2 209625053 + Exonic hg38 COAD TCGA-DM-A1D0-01A 2 9 5'UTR-5'UTR Intra-chr q33.3 q34 Seq+ 88710 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDRG3-BCAS4 NDRG3 chr20 36682518 - BCAS4 chr20 50818211 + Exonic hg38 COAD TCGA-DM-A1D0-01A 2 5 In-Frame Intra-chr q11.23 q13.13 Seq+ 88711 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM245-IKBKAP TMEM245 chr9 109080839 - IKBKAP chr9 108927453 - Exonic hg38 COAD TCGA-DM-A1D4-01A 2 11 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 88712 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRM-ELP4 PTPRM chr18 8143779 + ELP4 chr11 31783393 + Exonic hg38 COAD TCGA-DM-A1D6-01A 2 20 In-Frame Inter-chr p11.23 p13 Seq+ 88713 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM49B-GNAL FAM49B chr8 129871375 - GNAL chr18 11862395 + Exonic hg38 COAD TCGA-DM-A1D6-01A 1 4 Out-of-frame Inter-chr q24.21 p11.21 88714 ChimerSeq TCGA FAWG TCGA_RNA-Seq YWHAB-GLO1 YWHAB chr20 44885886 + GLO1 chr6 38686974 - Exonic hg38 COAD TCGA-DM-A1D7-01A 25 101 5'UTR-CDS Inter-chr q13.12 p21.2 Seq+ 88715 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFYA-TREML2 NFYA chr6 41090309 + TREML2 chr6 41194833 - Exonic hg38 COAD TCGA-DM-A1D7-01A 2 20 In-Frame Intra-chr p21.1 Transcription factor p21.1 Seq+ 88716 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNFSF13B-RAB20 TNFSF13B chr13 108270424 + RAB20 chr13 110524197 - Exonic hg38 COAD TCGA-DM-A1D7-01A 1 11 In-Frame Intra-chr q33.3 q34 Seq+ 88717 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFI1-OSBP2 SFI1 chr22 31508376 + OSBP2 chr22 30870429 + Exonic hg38 COAD TCGA-DM-A1D7-01A 1 7 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 88718 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLIC5-SUPT3H CLIC5 chr6 45949256 - SUPT3H chr6 45106006 - Exonic hg38 COAD TCGA-DM-A1D7-01A 1 4 In-Frame Intra-chr p21.1 p21.1 88719 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRF-ARTN PTPRF chr1 43592601 + ARTN chr1 43935655 + Exonic hg38 COAD TCGA-DM-A1D8-01A 7 38 CDS-5'UTR Intra-chr p34.2 p34.1 Seq+ 88720 ChimerSeq TCGA FAWG TCGA_RNA-Seq SND1-ARF5 SND1 chr7 127694908 + ARF5 chr7 127588404 + Exonic hg38 COAD TCGA-DM-A1D8-01A 3 14 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 88721 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP7-TMEM186 USP7 chr16 8963207 - TMEM186 chr16 8781444 - Exonic hg38 COAD TCGA-DM-A1D8-01A 2 6 CDS-3'UTR Intra-chr p13.2 p13.2 88722 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFXN1-CPLX2 SFXN1 chr5 175492267 + CPLX2 chr5 175878652 + Exonic hg38 COAD TCGA-DM-A1DA-01A 5 17 CDS-5'UTR Intra-chr q35.2 q35.2 Seq+ 88723 ChimerSeq TCGA FAWG TCGA_RNA-Seq PANK2-PAK5 PANK2 chr20 3889728 + PAK5 chr20 9644339 - Exonic hg38 COAD TCGA-DM-A1HA-01A 6 20 5'UTR-5'UTR Intra-chr p13 p12.2 STE:STE20 88724 ChimerSeq TCGA FAWG TCGA_RNA-Seq FHOD3-MTUS2 FHOD3 chr18 36760782 + MTUS2 chr13 29480150 + Exonic hg38 COAD TCGA-DM-A1HA-01A 2 10 In-Frame Inter-chr q12.2 q12.3 Seq+ 88725 ChimerSeq TCGA FAWG TCGA_RNA-Seq GUSBP11-MIF GUSBP11 chr22 23686831 - MIF chr22 23894772 + Exonic hg38 COAD TCGA-DM-A1HA-01A 1 12 3'UTR-3'UTR Intra-chr q11.23 q11.23 Tumor suppressor gene 88726 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC23A2-CDS2 SLC23A2 chr20 5001406 - CDS2 chr20 5182387 + Exonic hg38 COAD TCGA-DM-A1HA-01A 1 7 5'UTR-CDS Intra-chr p13 p12.3 Seq+ 88727 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK1-ANKRD13B TAOK1 chr17 29391024 + ANKRD13B chr17 29607742 + Exonic hg38 COAD TCGA-DM-A1HA-01A 2 1 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 88728 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM36-MCTP1 TRIM36 chr5 115144598 - MCTP1 chr5 95017484 - Exonic hg38 COAD TCGA-DM-A280-01A 2 5 In-Frame Intra-chr q22.3 q15 Seq+ 88729 ChimerSeq TCGA FAWG TCGA_RNA-Seq IPO13-EIF2B3 IPO13 chr1 43961262 + EIF2B3 chr1 44857807 - Exonic hg38 COAD TCGA-DM-A285-01A 1 9 Out-of-frame Intra-chr p34.1 p34.1 Seq+ 88730 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD1-RGMB CHD1 chr5 98879552 - RGMB chr5 98793085 + Exonic hg38 COAD TCGA-DM-A288-01A 9 39 In-Frame Intra-chr q21.1 Tumor suppressor gene q15 Seq+ 88731 ChimerSeq TCGA FAWG TCGA_RNA-Seq NT5C2-ARL3 NT5C2 chr10 103139406 - ARL3 chr10 102689943 - Exonic hg38 COAD TCGA-DM-A28A-01A 7 25 Out-of-frame Intra-chr q24.33 q24.32 Seq+ 88732 ChimerSeq TCGA FAWG TCGA_RNA-Seq ORMDL1-RALGDS ORMDL1 chr2 189784269 - RALGDS chr9 133104331 - Exonic hg38 COAD TCGA-DM-A28A-01A 7 17 5'UTR-CDS Inter-chr q32.2 q34.2 Oncogene Seq+ 88733 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKHD1-USO1 ANKHD1 chr5 140513479 + USO1 chr4 75752373 + Exonic hg38 COAD TCGA-DM-A28A-01A 4 11 In-Frame Inter-chr q31.3 q21.1 88734 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASA3-SCARA3 RASA3 chr13 113999585 - SCARA3 chr8 27670900 + Exonic hg38 COAD TCGA-DM-A28A-01A 4 5 5'UTR-CDS Inter-chr p21.1 Seq+ 88735 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRRF-TTLL11 MRRF chr9 122291840 + TTLL11 chr9 121870748 - Exonic hg38 COAD TCGA-DM-A28A-01A 3 8 In-Frame Intra-chr q33.2 q33.2 Seq+ 88736 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC171-CNTLN CCDC171 chr9 15784694 + CNTLN chr9 17457524 + Exonic hg38 COAD TCGA-DM-A28A-01A 2 2 In-Frame Intra-chr p22.3 p22.2 Seq+ 88737 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT11-WWC2 SEPT11 chr4 76949930 + WWC2 chr4 183193599 + Exonic hg38 COAD TCGA-DM-A28A-01A 1 4 Out-of-frame Intra-chr q21.1 q35.1 88738 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIPEP-MYO16 MIPEP chr13 23805950 - MYO16 chr13 108855443 + Exonic hg38 COAD TCGA-DM-A28F-01A 5 29 In-Frame Intra-chr q12.12 Seq+ 88739 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIPEP-POLR1D MIPEP chr13 23805950 - POLR1D chr13 27738707 + Exonic hg38 COAD TCGA-DM-A28F-01A 4 9 CDS-3'UTR Intra-chr q12.12 q12.2 88740 ChimerSeq TCGA FAWG TCGA_RNA-Seq BPNT1-RAB3GAP2 BPNT1 chr1 220089686 - RAB3GAP2 chr1 220154057 - Exonic hg38 COAD TCGA-DM-A28F-01A 2 12 5'UTR-CDS Intra-chr q41 q41 Seq+ 88741 ChimerSeq TCGA FAWG TCGA_RNA-Seq PROSER1-MIPEP PROSER1 chr13 39029281 - MIPEP chr13 23870195 - Exonic hg38 COAD TCGA-DM-A28F-01A 2 10 Out-of-frame Intra-chr q13.3 q12.12 Seq+ 88742 ChimerSeq TCGA FAWG TCGA_RNA-Seq CARD11-ZNRD1 CARD11 chr7 3043667 - ZNRD1 chr6 30061515 + Exonic hg38 COAD TCGA-DM-A28F-01A 1 7 5'UTR-3'UTR Inter-chr p22.2 Oncogene Seq+ 88743 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM223-SLC22A6 TMEM223 chr11 62791679 - SLC22A6 chr11 62936486 - Exonic hg38 COAD TCGA-DM-A28F-01A 1 7 CDS-3'UTR Intra-chr q12.3 q12.3 88744 ChimerSeq TCGA FAWG TCGA_RNA-Seq GBE1-MKRN2OS GBE1 chr3 81705444 - MKRN2OS chr3 12515016 - Exonic hg38 COAD TCGA-DM-A28H-01A 6 77 CDS-3'UTR Intra-chr p12.2 p25.2 88745 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED14-SRPX MED14 chrX 40688454 - SRPX chrX 38149894 - Exonic hg38 COAD TCGA-F4-6459-01A 19 80 In-Frame Intra-chr p11.4 p11.4 Tumor suppressor gene Seq+ 88746 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTUS2-PTPN14 MTUS2 chr13 28820611 + PTPN14 chr1 214402953 - Exonic hg38 COAD TCGA-F4-6459-01A 8 70 5'UTR-CDS Inter-chr q12.3 q41 88747 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K13-NSUN2 MAP3K13 chr3 185328962 + NSUN2 chr5 6625669 - Exonic hg38 COAD TCGA-F4-6459-01A 1 17 5'UTR-CDS Inter-chr q27.2 p15.31 Seq+ 88748 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF717-FOXP1 ZNF717 chr3 75783306 - FOXP1 chr3 71493555 - Exonic hg38 COAD TCGA-F4-6459-01A 3 5 5'UTR-5'UTR Intra-chr p12.3 Transcription factor p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 88749 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRYL-CORIN FRYL chr4 48570827 - CORIN chr4 47626521 - Exonic hg38 COAD TCGA-F4-6461-01A 5 39 In-Frame Intra-chr p11 p12 Seq+ 88750 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX8-PPY DHX8 chr17 43484185 + PPY chr17 43941214 - Exonic hg38 COAD TCGA-F4-6461-01A 3 6 Out-of-frame Intra-chr q21.31 q21.31 Seq+ 88751 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIN3A-SEMA7A SIN3A chr15 75451423 - SEMA7A chr15 74418952 - Exonic hg38 COAD TCGA-F4-6461-01A 1 7 5'UTR-5'UTR Intra-chr q24.2 q24.1 Seq+ 88752 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDLRAD4-DLGAP1 LDLRAD4 chr18 13621271 + DLGAP1 chr18 3582248 - Exonic hg38 COAD TCGA-F4-6461-01A 1 3 Out-of-frame Intra-chr p11.21 p11.31 88753 ChimerSeq TCGA FAWG TCGA_RNA-Seq FUCA1-TCEA3 FUCA1 chr1 23854360 - TCEA3 chr1 23418009 - Exonic hg38 COAD TCGA-F4-6570-01A 11 49 CDS-5'UTR Intra-chr p36.11 Seq+ 88754 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD7-TCF7L2 CHD7 chr8 60743097 + TCF7L2 chr10 113141184 + Exonic hg38 COAD TCGA-F4-6807-01A 15 72 In-Frame Inter-chr q12.2 q25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 88755 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF7L2-CHD7 TCF7L2 chr10 113040126 + CHD7 chr8 60781000 + Exonic hg38 COAD TCGA-F4-6807-01A 3 17 In-Frame Inter-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q12.2 Seq+ 88756 ChimerSeq TCGA FAWG TCGA_RNA-Seq FUS-PYCARD FUS chr16 31182422 + PYCARD chr16 31202203 - Exonic hg38 COAD TCGA-F4-6809-01A 2 116 Out-of-frame Intra-chr p11.2 Tumor suppressor gene p11.2 Tumor suppressor gene Seq+ 88757 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP7-OPRM1 MAP7 chr6 136411620 - OPRM1 chr6 154073515 + Exonic hg38 COAD TCGA-F4-6854-01A 2 8 5'UTR-5'UTR Intra-chr q23.3 q25.2 Seq+ 88758 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABR-YWHAE ABR chr17 1228793 - YWHAE chr17 1365058 - Exonic hg38 COAD TCGA-G4-6294-01A 1 1 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 88759 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIPE-CXCL17 LIPE chr19 42423419 - CXCL17 chr19 42433856 - Exonic hg38 COAD TCGA-G4-6295-01A 1 10 CDS-3'UTR Intra-chr q13.2 q13.2 88760 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA2026-INSL6 KIAA2026 chr9 5988345 - INSL6 chr9 5164265 - Exonic hg38 COAD TCGA-G4-6298-01A 2 27 Out-of-frame Intra-chr p24.1 p24.1 Seq+ 88761 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELSR1-RNF215 CELSR1 chr22 46533627 - RNF215 chr22 30388279 - Exonic hg38 COAD TCGA-G4-6298-01A 1 4 CDS-5'UTR Intra-chr q13.31 q12.2 88762 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPHN-ARG2 GPHN chr14 67058786 + ARG2 chr14 67646921 + Exonic hg38 COAD TCGA-G4-6299-01A 1 11 CDS-5'UTR Intra-chr q23.3 q24.1 88763 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD12-TXNDC2 ANKRD12 chr18 9275667 + TXNDC2 chr18 9885962 + Exonic hg38 COAD TCGA-G4-6299-01A 1 4 CDS-5'UTR Intra-chr p11.22 p11.22 88764 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITCH-PIGU ITCH chr20 34489926 + PIGU chr20 34560979 - Exonic hg38 COAD TCGA-G4-6303-01A 9 59 In-Frame Intra-chr q11.22 q11.22 Seq+ 88765 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF7-ATP5G2 ATF7 chr12 53626279 - ATP5G2 chr12 53669948 - Exonic hg38 COAD TCGA-G4-6304-01A 3 6 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 Seq+ 88766 ChimerSeq TCGA FAWG TCGA_RNA-Seq CALCB-INSC CALCB chr11 15080961 + INSC chr11 15149130 + Exonic hg38 COAD TCGA-G4-6306-01A 1000 1000 3'UTR-CDS Intra-chr p15.2 p15.2 88767 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD1-NHEJ1 PSMD1 chr2 231146356 + NHEJ1 chr2 219147795 - Exonic hg38 COAD TCGA-G4-6307-01A 10 82 In-Frame Intra-chr q37.1 q35 Seq+ 88768 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB14-PSMD1 GRB14 chr2 164547660 - PSMD1 chr2 231153564 + Exonic hg38 COAD TCGA-G4-6307-01A 1 8 Out-of-frame Intra-chr q24.3 q37.1 88769 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPH7-ZMYND19 DPH7 chr9 137578625 - ZMYND19 chr9 137588718 - Exonic hg38 COAD TCGA-G4-6309-01A 2 4 In-Frame Intra-chr q34.3 q34.3 88770 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFAF6-FAM92A NDUFAF6 chr8 94958179 + FAM92A chr8 93726394 + Exonic hg38 COAD TCGA-G4-6311-01A 5 15 5'UTR-5'UTR Intra-chr q22.1 q22.1 88771 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBD2-AKAIN1 MBD2 chr18 54224018 - AKAIN1 chr18 5145755 - Exonic hg38 COAD TCGA-G4-6314-01A 7 18 Out-of-frame Intra-chr q21.2 Transcription factor p11.31 88772 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPATA2-RTFDC1 SPATA2 chr20 49915380 - RTFDC1 chr20 56513315 + Exonic hg38 COAD TCGA-G4-6315-01A 2 19 Out-of-frame Intra-chr q13.13 q13.31 Seq+ 88773 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTMR2-MMP8 MTMR2 chr11 95914242 - MMP8 chr11 102725003 - Exonic hg38 COAD TCGA-G4-6317-01A 23 75 5'UTR-5'UTR Intra-chr q21 q22.2 Seq+ 88774 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIB1-MYO5B MIB1 chr18 21858646 + MYO5B chr18 49880455 - Exonic hg38 COAD TCGA-G4-6322-01A 14 45 In-Frame Intra-chr q11.2 q21.1 Seq+ 88775 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHG1-CCDC170 PLEKHG1 chr6 150650786 + CCDC170 chr6 151536318 + Exonic hg38 COAD TCGA-G4-6322-01A 4 5 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 88776 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETHE1-POU2F2 ETHE1 chr19 43527097 - POU2F2 chr19 42096243 - Exonic hg38 COAD TCGA-G4-6322-01A 2 3 In-Frame Intra-chr q13.31 q13.2 Transcription factor Seq+ 88777 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD1-TRPM8 PSMD1 chr2 231087181 + TRPM8 chr2 233980188 + Exonic hg38 COAD TCGA-G4-6322-01A 1 5 Out-of-frame Intra-chr q37.1 q37.1 88778 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCEH1-EEF1G NCEH1 chr3 172710847 - EEF1G chr11 62559837 - Exonic hg38 COAD TCGA-G4-6323-01A 8 60 In-Frame Inter-chr q26.31 q12.3 Seq+ 88779 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC42-CELA3A CDC42 chr1 22052742 + CELA3A chr1 22005447 + Exonic hg38 COAD TCGA-G4-6588-01A 2 5 5'UTR-CDS Intra-chr p36.12 p36.12 Seq+ 88780 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF3B-TOX2 KIF3B chr20 32311181 + TOX2 chr20 43973367 + Exonic hg38 COAD TCGA-G4-6625-01A 5 8 In-Frame Intra-chr q11.21 q13.12 Seq+ 88781 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC1-ATP6V0D1 ZDHHC1 chr16 67416171 - ATP6V0D1 chr16 67453715 - Exonic hg38 COAD TCGA-G4-6625-01A 1 12 5'UTR-CDS Intra-chr q22.1 q22.1 88782 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACSL5-ATE1 ACSL5 chr10 112399009 + ATE1 chr10 121790289 - Exonic hg38 COAD TCGA-G4-6625-01A 2 6 Out-of-frame Intra-chr q25.2 q26.13 Seq+ 88783 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAS2L3-SND1 GAS2L3 chr12 100601753 + SND1 chr7 127694828 + Exonic hg38 COAD TCGA-G4-6626-01A 7 27 In-Frame Inter-chr q23.1 q32.1 Seq+ 88784 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSMAF-TOX NSMAF chr8 58659573 - TOX chr8 58851805 - Exonic hg38 COAD TCGA-G4-6626-01A 3 5 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 88785 ChimerSeq TCGA FAWG TCGA_RNA-Seq C7orf50-INTS1 C7orf50 chr7 1127257 - INTS1 chr7 1496264 - Exonic hg38 COAD TCGA-G4-6626-01A 2 5 In-Frame Intra-chr p22.3 p22.3 Seq+ 88786 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENO2-PIANP ENO2 chr12 6914659 + PIANP chr12 6698104 - Exonic hg38 COAD TCGA-G4-6626-01A 1 3 5'UTR-5'UTR Intra-chr p13.31 p13.31 88787 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPEP1-TCF25 DPEP1 chr16 89613719 + TCF25 chr16 89910591 + Exonic hg38 COAD TCGA-G4-6627-01A 1 4 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 88788 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA5-FGF6 PLEKHA5 chr12 19130130 + FGF6 chr12 4445273 - Exonic hg38 COAD TCGA-NH-A50U-01A 14 74 In-Frame Intra-chr p12.3 p13.32 Seq+ 88789 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF12-FAM98B TCF12 chr15 57091891 + FAM98B chr15 38464032 + Exonic hg38 COAD TCGA-NH-A50U-01A 1 2 Out-of-frame Intra-chr q21.3 Oncogene Transcription factor q14 88790 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITCH-SRC ITCH chr20 34369470 + SRC chr20 37365204 + Exonic hg38 COAD TCGA-NH-A50V-01A 1 7 5'UTR-5'UTR Intra-chr q11.22 q11.23 TK:Src Oncogene Seq+ 88791 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM156A-IGKJ1 FAM156A chrX 52927696 - IGKJ1 chr2 88861920 - Exonic hg38 COAD TCGA-NH-A6GB-01A 12 0 Out-of-frame Inter-chr p11.22 p11.2 88792 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF774-TTLL13P ZNF774 chr15 90358957 + TTLL13P chr15 90253249 + Exonic hg38 COAD TCGA-QG-A5YV-01A 1 26 CDS-5'UTR Intra-chr q26.1 Transcription factor q26.1 88793 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGKV2D-IGKJ3 IGKV2D chr2 89986700 + IGKJ3 chr2 88861253 - Exonic hg38 COAD TCGA-QG-A5YW-01A 20 78 Out-of-frame Intra-chr p11.2 88794 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF460-C19orf18 ZNF460 chr19 57280836 + C19orf18 chr19 57958717 - Exonic hg38 COAD TCGA-QG-A5YX-01A 30 129 Out-of-frame Intra-chr q13.43 Transcription factor q13.43 Seq+ 88795 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZWILCH-IQCH ZWILCH chr15 66515644 + IQCH chr15 67465127 + Exonic hg38 COAD TCGA-QG-A5Z1-01A 1 17 Out-of-frame Intra-chr q22.31 q23 88796 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICU1-C10orf105 MICU1 chr10 72475100 - C10orf105 chr10 71716342 - Exonic hg38 COAD TCGA-QG-A5Z1-01A 2 2 CDS-5'UTR Intra-chr q22.1 q22.1 Seq+ 88797 ChimerSeq TCGA FAWG TCGA_RNA-Seq B2M-SORD2P B2M chr15 44711613 + SORD2P chr15 44850387 - Exonic hg38 COAD TCGA-QL-A97D-01A 37 78 3'UTR-5'UTR Intra-chr Oncogene 88798 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMIP-UBE2G1 CMIP chr16 81445541 + UBE2G1 chr17 4307123 - Exonic hg38 COAD TCGA-QL-A97D-01A 2 6 Out-of-frame Inter-chr q23.2 p13.2 Seq+ 88799 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK9-USH2A DOCK9 chr13 98955435 - USH2A chr1 215639238 - Exonic hg38 COAD TCGA-QL-A97D-01A 1 5 Out-of-frame Inter-chr q32.3 q41 Seq+ 88800 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRSF1-ELFN2 GRSF1 chr4 70832307 - ELFN2 chr22 37375996 - Exonic hg38 COAD TCGA-RU-A8FL-01A 1 14 CDS-5'UTR Inter-chr q13.3 q13.1 Seq+ 88801 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSPP1-TERF1 CSPP1 chr8 67103135 + TERF1 chr8 73045961 + Exonic hg38 COAD TCGA-RU-A8FL-01A 2 8 Out-of-frame Intra-chr q13.1 q21.11 Transcription factor Seq+ 88802 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKDC-CLVS1 PRKDC chr8 47912410 - CLVS1 chr8 61292318 + Exonic hg38 COAD TCGA-RU-A8FL-01A 1 10 CDS-5'UTR Intra-chr q11.21 Oncogene q12.2 Seq+ 88803 ChimerSeq TCGA FAWG TCGA_RNA-Seq UFM1-EEF1D UFM1 chr13 38350055 + EEF1D chr8 143586852 - Exonic hg38 COAD TCGA-RU-A8FL-01A 1 6 5'UTR-5'UTR Inter-chr q13.3 88804 ChimerSeq TCGA FAWG TCGA_RNA-Seq UFM1-PSPC1 UFM1 chr13 38350055 + PSPC1 chr13 19677823 - Exonic hg38 COAD TCGA-RU-A8FL-01A 1 3 In-Frame Intra-chr q13.3 q12.11 88805 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIP12-PID1 TRIP12 chr2 229813870 - PID1 chr2 229026108 - Exonic hg38 COAD TCGA-T9-A92H-01A 1 5 In-Frame Intra-chr q36.3 q36.3 Seq+ 88806 ChimerSeq TCGA FAWG TCGA_RNA-Seq LARS2-ANO10 LARS2 chr3 45500579 + ANO10 chr3 43366974 - Exonic hg38 DLBC TCGA-FA-8693-01A 5 27 Out-of-frame Intra-chr p21.31 p21.33 Seq+ 88807 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1XR1-TP73 TBL1XR1 chr3 177053773 - TP73 chr1 3707549 + Exonic hg38 DLBC TCGA-FA-A4XK-01A 14 38 In-Frame Inter-chr q26.32 p36.32 Tumor suppressor gene Transcription factor Seq+ 88808 ChimerSeq TCGA FAWG TCGA_RNA-Seq LARS2-TBL1XR1 LARS2 chr3 45419729 + TBL1XR1 chr3 177051726 - Exonic hg38 DLBC TCGA-FA-A4XK-01A 1 3 In-Frame Intra-chr p21.31 q26.32 Seq+ 88809 ChimerSeq TCGA FAWG TCGA_RNA-Seq CXCR4-CFLAR CXCR4 chr2 136118046 - CFLAR chr2 201129729 + Exonic hg38 DLBC TCGA-FA-A6HN-01A 16 111 CDS-5'UTR Intra-chr q22.1 q33.1 Seq+ 88810 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAST2-NASP MAST2 chr1 45882395 + NASP chr1 45591223 + Exonic hg38 DLBC TCGA-FA-A6HN-01A 8 24 In-Frame Intra-chr p34.1 AGC:MAST p34.1 Seq+ 88811 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGHM-SMPD4 IGHM chr14 105851840 - SMPD4 chr2 130181718 - Exonic hg38 DLBC TCGA-FA-A6HO-01A 7 1 Out-of-frame Inter-chr q32.33 q21.1 88812 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOR2-MORN3 NCOR2 chr12 124495147 - MORN3 chr12 121652808 - Exonic hg38 DLBC TCGA-FA-A7DS-01A 1 14 CDS-5'UTR Intra-chr q24.31 q24.31 Seq+ 88813 ChimerSeq TCGA FAWG TCGA_RNA-Seq UHRF1-KDM4B UHRF1 chr19 4941931 + KDM4B chr19 5047476 + Exonic hg38 DLBC TCGA-FA-A7DS-01A 2 3 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 88814 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOCS1-MYC SOCS1 chr16 11256079 - MYC chr8 127738251 + Exonic hg38 DLBC TCGA-FA-A7Q1-01A 10 30 5'UTR-CDS Inter-chr p13.13 Oncogene Tumor suppressor gene q24.21 Oncogene Transcription factor Seq+ 88815 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO46-BHMG1 FBXO46 chr19 45730849 - BHMG1 chr19 45735377 + Exonic hg38 DLBC TCGA-FA-A82F-01A 12 12 5'UTR-5'UTR Intra-chr q13.32 q13.32 88816 ChimerSeq TCGA FAWG TCGA_RNA-Seq REL-PUS10 REL chr2 60921999 + PUS10 chr2 60945108 - Exonic hg38 DLBC TCGA-FA-A82F-01A 8 27 In-Frame Intra-chr p16.1 Oncogene Transcription factor p15 Seq+ 88817 ChimerSeq TCGA FAWG TCGA_RNA-Seq CXCR4-IGHA2 CXCR4 chr2 136118046 - IGHA2 chr14 105588394 - Exonic hg38 DLBC TCGA-FA-A86F-01A 3 13 Out-of-frame Inter-chr q22.1 Seq+ 88818 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM107B-PRKCQ FAM107B chr10 14604240 - PRKCQ chr10 6498558 - Exonic hg38 DLBC TCGA-FA-A86F-01A 1 7 5'UTR-CDS Intra-chr p13 p15.1 88819 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH1L-ZNF687 ASH1L chr1 155562153 - ZNF687 chr1 151290715 + Exonic hg38 DLBC TCGA-FF-8043-01A 12 34 5'UTR-CDS Intra-chr q22 Transcription factor q21.3 Transcription factor Seq+ 88820 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R12A-EIF2S3L PPP1R12A chr12 79872808 - EIF2S3L chr12 10522603 + Exonic hg38 DLBC TCGA-FF-8043-01A 2 28 Out-of-frame Intra-chr q21.31 Seq+ 88821 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERTAD2-DEFB124 SERTAD2 chr2 64750281 - DEFB124 chr20 31473038 - Exonic hg38 DLBC TCGA-FF-8043-01A 3 10 Out-of-frame Inter-chr p14 q11.21 Seq+ 88822 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOXB3-PITPNC1 HOXB3 chr17 48604480 - PITPNC1 chr17 67532802 + Exonic hg38 DLBC TCGA-FF-8047-01A 2 18 5'UTR-CDS Intra-chr q21.32 Transcription factor q24.2 Seq+ 88823 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOXB6-PITPNC1 HOXB6 chr17 48604480 - PITPNC1 chr17 67532802 + Exonic hg38 DLBC TCGA-FF-8047-01A 2 18 5'UTR-CDS Intra-chr q21.32 Transcription factor q24.2 Seq+ 88824 ChimerSeq TCGA FAWG TCGA_RNA-Seq FHIT-KHDRBS3 FHIT chr3 61042047 - KHDRBS3 chr8 135542654 + Exonic hg38 DLBC TCGA-FF-A7CQ-01A 4 34 5'UTR-CDS Inter-chr p14.2 Tumor suppressor gene q24.23 Seq+ 88825 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD80-CFAP44 CD80 chr3 119557629 - CFAP44 chr3 113433669 - Exonic hg38 DLBC TCGA-FF-A7CQ-01A 1 8 CDS-5'UTR Intra-chr q13.33 q13.2 88826 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNNT1-TNNI3 TNNT1 chr19 55149161 - TNNI3 chr19 55154830 - Exonic hg38 DLBC TCGA-FF-A7CX-01A 5 3 5'UTR-CDS Intra-chr q13.42 q13.42 88827 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAF1-EIF3L RAF1 chr3 12611950 - EIF3L chr22 37886765 + Exonic hg38 DLBC TCGA-G8-6325-01A 7 52 Out-of-frame Inter-chr p25.2 TKL:RAF Oncogene q13.1 Seq+ 88828 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHCHD10-DRICH1 CHCHD10 chr22 23767834 - DRICH1 chr22 23626048 - Exonic hg38 DLBC TCGA-G8-6325-01A 1 6 5'UTR-CDS Intra-chr q11.23 q11.23 88829 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERPINB1-SERPINB6 SERPINB1 chr6 2837882 - SERPINB6 chr6 2953186 - Exonic hg38 DLBC TCGA-G8-6326-01A 24 247 In-Frame Intra-chr p25.2 p25.2 88830 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOX-PPA2 TOX chr8 58939302 - PPA2 chr4 105424322 - Exonic hg38 DLBC TCGA-G8-6326-01A 2 1 In-Frame Inter-chr q12.1 q24 88831 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL6-RHOH BCL6 chr3 187745410 - RHOH chr4 40242714 + Exonic hg38 DLBC TCGA-G8-6906-01A 22 31 5'UTR-5'UTR Inter-chr q27.3 Oncogene Transcription factor p14 Oncogene KB Seq+ 88832 ChimerSeq TCGA FAWG TCGA_RNA-Seq QRICH1-C3orf62 QRICH1 chr3 49032183 - C3orf62 chr3 49274140 - Exonic hg38 DLBC TCGA-G8-6909-01A 6 34 In-Frame Intra-chr p21.31 p21.31 Seq+ 88833 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAVER1-BTBD2 RAVER1 chr19 10333289 - BTBD2 chr19 1997463 - Exonic hg38 DLBC TCGA-GR-A4D4-01A 1 10 Out-of-frame Intra-chr p13.2 p13.3 88834 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPIDR-CSMD3 SPIDR chr8 47599196 + CSMD3 chr8 112556954 - Exonic hg38 DLBC TCGA-GS-A9TQ-01A 4 7 Out-of-frame Intra-chr q11.21 q23.3 Oncogene Seq+ 88835 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXP1-ACTN4 FOXP1 chr3 71198202 - ACTN4 chr19 38726957 + Exonic hg38 DLBC TCGA-GS-A9TU-01A 2 7 3'UTR-3'UTR Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 88836 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFC1-PDS5A RFC1 chr4 39326563 - PDS5A chr4 39825488 - Exonic hg38 DLBC TCGA-GS-A9TV-01A 64 137 Out-of-frame Intra-chr p14 p14 Seq+ 88837 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM53B-PROSER2 FAM53B chr10 124696158 - PROSER2 chr10 11866531 + Exonic hg38 DLBC TCGA-GS-A9TV-01A 3 12 Out-of-frame Intra-chr q26.13 p14 Seq+ 88838 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA2-ADAM9 PLEKHA2 chr8 38918070 + ADAM9 chr8 39018853 + Exonic hg38 DLBC TCGA-GS-A9TV-01A 2 4 CDS-3'UTR Intra-chr p11.22 88839 ChimerSeq TCGA FAWG TCGA_RNA-Seq AICDA-SLC9A7 AICDA chr12 8612760 - SLC9A7 chrX 46682535 - Exonic hg38 DLBC TCGA-GS-A9TW-01A 37 49 Out-of-frame Inter-chr p13.31 p11.3 Seq+ 88840 ChimerSeq TCGA FAWG TCGA_RNA-Seq VAV2-FNBP1 VAV2 chr9 133992075 - FNBP1 chr9 129994958 - Exonic hg38 DLBC TCGA-GS-A9TW-01A 19 50 In-Frame Intra-chr q34.2 q34.11 Seq+ 88841 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL6-IGHG1 BCL6 chr3 187745410 - IGHG1 chr14 105743070 - Exonic hg38 DLBC TCGA-GS-A9TY-01A 11 10 Out-of-frame Inter-chr q27.3 Oncogene Transcription factor q32.33 Seq+ 88842 ChimerSeq TCGA FAWG TCGA_RNA-Seq CIR1-AGPS CIR1 chr2 174351619 - AGPS chr2 177538074 + Exonic hg38 DLBC TCGA-GS-A9TY-01A 4 20 Out-of-frame Intra-chr q31.1 q31.2 Seq+ 88843 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM221A-KLHL7 FAM221A chr7 23691596 + KLHL7 chr7 23117834 + Exonic hg38 DLBC TCGA-GS-A9TY-01A 2 6 CDS-5'UTR Intra-chr p15.3 p15.3 Seq+ 88844 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATAD2A-GIPC1 GATAD2A chr19 19465614 + GIPC1 chr19 14492912 - Exonic hg38 DLBC TCGA-RQ-A6JB-01A 3 18 CDS-5'UTR Intra-chr p13.11 Transcription factor p13.12 Seq+ 88845 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASF1B-KLF1 ASF1B chr19 14126121 - KLF1 chr19 12885812 - Exonic hg38 DLBC TCGA-RQ-A6JB-01A 4 6 Out-of-frame Intra-chr p13.12 p13.13 Transcription factor Seq+ 88846 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1orf132-FAM72A C1orf132 chr1 207815929 - FAM72A chr1 206199884 - Exonic hg38 DLBC TCGA-RQ-A6JB-01A 2 5 Out-of-frame Intra-chr q32.2 q32.1 Seq+ 88847 ChimerSeq TCGA FAWG TCGA_RNA-Seq COMMD1-PAPOLG COMMD1 chr2 61905858 + PAPOLG chr2 60760134 + Exonic hg38 DLBC TCGA-RQ-A6JB-01A 1 5 Out-of-frame Intra-chr p15 p16.1 88848 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERLIN1-DOCK1 ERLIN1 chr10 100174208 - DOCK1 chr10 127403055 + Exonic hg38 DLBC TCGA-VB-A8QN-01A 5 20 In-Frame Intra-chr q24.31 q26.2 Seq+ 88849 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPATCH8-ATXN7L3 GPATCH8 chr17 44464472 - ATXN7L3 chr17 44198130 - Exonic hg38 DLBC TCGA-VB-A8QN-01A 4 7 5'UTR-5'UTR Intra-chr q21.31 q21.31 Seq+ 88850 ChimerSeq TCGA FAWG TCGA_RNA-Seq GMDS-PPP1R11 GMDS chr6 1930103 - PPP1R11 chr6 30068590 + Exonic hg38 DLBC TCGA-VB-A8QN-01A 2 9 CDS-3'UTR Intra-chr p25.3 Seq+ 88851 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPG1-RAB7A COPG1 chr3 129268620 + RAB7A chr3 128795360 + Exonic hg38 DLBC TCGA-VB-A8QN-01A 1 4 CDS-5'UTR Intra-chr q21.3 q21.3 Tumor suppressor gene 88852 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKP3-SORL1 PKP3 chr11 403771 + SORL1 chr11 121632016 + Exonic hg38 DLBC TCGA-VB-A8QN-01A 1 4 CDS-3'UTR Intra-chr p15.5 q24.1 88853 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD3-IKZF3 STARD3 chr17 39637231 + IKZF3 chr17 39832151 - Exonic hg38 ESCA TCGA-2H-A9GF-01A 276 170 5'UTR-5'UTR Intra-chr q12 q21.1 Tumor suppressor gene Transcription factor Seq+ 88854 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD13-CAB39L STARD13 chr13 33350290 - CAB39L chr13 49382941 - Exonic hg38 ESCA TCGA-2H-A9GF-01A 68 35 5'UTR-5'UTR Intra-chr q13.1 Tumor suppressor gene q14.2 Seq+ 88855 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNRG-DDX52 SYNRG chr17 37568791 - DDX52 chr17 37609909 - Exonic hg38 ESCA TCGA-2H-A9GF-01A 46 12 5'UTR-5'UTR Intra-chr q12 Seq+ 88856 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP1-C1orf115 AGAP1 chr2 235968623 + C1orf115 chr1 220696612 + Exonic hg38 ESCA TCGA-2H-A9GF-01A 29 10 Out-of-frame Inter-chr q37.2 q41 Seq+ 88857 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP18-ADM2 USP18 chr22 18161486 + ADM2 chr22 50481592 + Exonic hg38 ESCA TCGA-2H-A9GF-01A 8 3 Out-of-frame Intra-chr q11.21 q13.33 Seq+ 88858 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-PPP1R1B ERBB2 chr17 39715939 + PPP1R1B chr17 39633883 + Exonic hg38 ESCA TCGA-2H-A9GF-01A 1 1 In-Frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 88859 ChimerSeq TCGA FAWG TCGA_RNA-Seq DECR1-STAU2 DECR1 chr8 90001561 + STAU2 chr8 73552319 - Exonic hg38 ESCA TCGA-2H-A9GG-01A 100 86 5'UTR-CDS Intra-chr q21.3 q21.11 Seq+ 88860 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUNX1T1-ZC2HC1A RUNX1T1 chr8 92075965 - ZC2HC1A chr8 78678563 + Exonic hg38 ESCA TCGA-2H-A9GG-01A 78 68 Out-of-frame Intra-chr q21.3 Oncogene q21.13 Seq+ 88861 ChimerSeq TCGA FAWG TCGA_RNA-Seq POU2F1-MAEL POU2F1 chr1 167220958 + MAEL chr1 167004180 + Exonic hg38 ESCA TCGA-2H-A9GG-01A 86 2 In-Frame Intra-chr q24.2 Transcription factor q24.1 Seq+ 88862 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIX-DOCK6 NFIX chr19 13025552 + DOCK6 chr19 11253726 - Exonic hg38 ESCA TCGA-2H-A9GG-01A 38 9 Out-of-frame Intra-chr p13.13 Transcription factor p13.2 Seq+ 88863 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK6-NFIX DOCK6 chr19 11262397 - NFIX chr19 13073047 + Exonic hg38 ESCA TCGA-2H-A9GG-01A 21 34 Out-of-frame Intra-chr p13.2 p13.13 Transcription factor Seq+ 88864 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOXA10-CSN1S1 HOXA10 chr7 27173349 - CSN1S1 chr4 69932544 + Exonic hg38 ESCA TCGA-2H-A9GG-01A 26 13 CDS-5'UTR Inter-chr p15.2 Transcription factor q13.3 Seq+ 88865 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-TMEM67 PVT1 chr8 127794734 + TMEM67 chr8 93795901 + Exonic hg38 ESCA TCGA-2H-A9GG-01A 21 32 5'UTR-5'UTR Intra-chr q24.21 q22.1 Seq+ 88866 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOT2-RAB11FIP3 RHOT2 chr16 668699 + RAB11FIP3 chr16 471295 + Exonic hg38 ESCA TCGA-2H-A9GG-01A 16 7 CDS-3'UTR Intra-chr p13.3 Seq+ 88867 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR1204-TMEM67 MIR1204 chr8 127796008 + TMEM67 chr8 93795409 + Exonic hg38 ESCA TCGA-2H-A9GG-01A 12 11 5'UTR-5'UTR Intra-chr q24.21 q22.1 88868 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1CA-TMEM134 PPP1CA chr11 67401728 - TMEM134 chr11 67467388 - Exonic hg38 ESCA TCGA-2H-A9GG-01A 6 21 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 Seq+ 88869 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D16-CASC1 TBC1D16 chr17 80035795 - CASC1 chr12 25161197 - Exonic hg38 ESCA TCGA-2H-A9GG-01A 8 7 5'UTR-5'UTR Inter-chr q25.3 p12.1 Tumor suppressor gene Seq+ 88870 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELF2-MGARP ELF2 chr4 139058669 - MGARP chr4 139268765 - Exonic hg38 ESCA TCGA-2H-A9GG-01A 8 5 3'UTR-CDS Intra-chr q31.1 Transcription factor q31.1 88871 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-SNX31 PVT1 chr8 127794734 + SNX31 chr8 100636011 - Exonic hg38 ESCA TCGA-2H-A9GG-01A 8 4 5'UTR-CDS Intra-chr q24.21 q22.3 88872 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF19A-CASC21 RNF19A chr8 100259107 - CASC21 chr8 127339281 + Exonic hg38 ESCA TCGA-2H-A9GG-01A 6 7 CDS-5'UTR Intra-chr q22.2 q24.21 88873 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPNE8-MGST1 CPNE8 chr12 38762112 - MGST1 chr12 16354231 + Exonic hg38 ESCA TCGA-2H-A9GH-01A 35 14 CDS-5'UTR Intra-chr q12 p12.3 Seq+ 88874 ChimerSeq TCGA FAWG TCGA_RNA-Seq NLRC5-FTO NLRC5 chr16 57046641 + FTO chr16 54111762 + Exonic hg38 ESCA TCGA-2H-A9GH-01A 13 10 In-Frame Intra-chr q13 q12.2 Seq+ 88875 ChimerSeq TCGA FAWG TCGA_RNA-Seq LEPR-MEF2D LEPR chr1 65605237 + MEF2D chr1 156469020 - Exonic hg38 ESCA TCGA-2H-A9GH-01A 10 6 In-Frame Intra-chr p31.3 q22 Transcription factor Seq+ 88876 ChimerSeq TCGA FAWG TCGA_RNA-Seq YTHDC1-GAK YTHDC1 chr4 68349726 - GAK chr4 898158 - Exonic hg38 ESCA TCGA-2H-A9GI-01A 61 15 5'UTR-CDS Intra-chr p16.3 Other:NAK Seq+ 88877 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAN2B1-FBXW9 MAN2B1 chr19 12649136 - FBXW9 chr19 12691454 - Exonic hg38 ESCA TCGA-2H-A9GI-01A 22 5 In-Frame Intra-chr p13.13 p13.13 Seq+ 88878 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB5-SLC24A2 ZBTB5 chr9 37465215 - SLC24A2 chr9 19577022 - Exonic hg38 ESCA TCGA-2H-A9GI-01A 15 3 5'UTR-CDS Intra-chr p13.2 Transcription factor p22.1 Seq+ 88879 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPF2-TMEM99 WIPF2 chr17 40256522 + TMEM99 chr17 40833115 + Exonic hg38 ESCA TCGA-2H-A9GI-01A 12 3 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 88880 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOSR1-CPD GOSR1 chr17 30484770 + CPD chr17 30461180 + Exonic hg38 ESCA TCGA-2H-A9GJ-01A 72 25 In-Frame Intra-chr q11.2 q11.2 Tumor suppressor gene Seq+ 88881 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDAH2-SLC44A4 DDAH2 chr6 31730051 - SLC44A4 chr6 31865784 - Exonic hg38 ESCA TCGA-2H-A9GJ-01A 60 29 5'UTR-5'UTR Intra-chr Seq+ 88882 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASIC2-TBCD ASIC2 chr17 34174560 - TBCD chr17 82921501 + Exonic hg38 ESCA TCGA-2H-A9GJ-01A 42 11 5'UTR-5'UTR Intra-chr q12 Seq+ 88883 ChimerSeq TCGA FAWG TCGA_RNA-Seq IRF7-RCC1 IRF7 chr11 615345 - RCC1 chr1 28516725 + Exonic hg38 ESCA TCGA-2H-A9GJ-01A 37 29 5'UTR-5'UTR Inter-chr Transcription factor p35.3 Seq+ 88884 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNFRSF11A-KIAA1468 TNFRSF11A chr18 62325427 + KIAA1468 chr18 62244764 + Exonic hg38 ESCA TCGA-2H-A9GJ-01A 34 29 Out-of-frame Intra-chr q21.33 q21.33 Seq+ 88885 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4A-MPL KDM4A chr1 43704112 + MPL chr1 43339964 + Exonic hg38 ESCA TCGA-2H-A9GJ-01A 35 9 In-Frame Intra-chr p34.2 p34.2 Oncogene Seq+ 88886 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNM3-PELP1 PITPNM3 chr17 6525356 - PELP1 chr17 4691442 - Exonic hg38 ESCA TCGA-2H-A9GJ-01A 26 2 Out-of-frame Intra-chr p13.1 p13.2 Seq+ 88887 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP3M2-PCAT2 AP3M2 chr8 42165560 + PCAT2 chr8 127079133 - Exonic hg38 ESCA TCGA-2H-A9GJ-01A 19 3 CDS-3'UTR Intra-chr p11.21 q24.21 Seq+ 88888 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41-POLR2L EPB41 chr1 28887210 + POLR2L chr11 840480 - Exonic hg38 ESCA TCGA-2H-A9GJ-01A 15 17 5'UTR-CDS Inter-chr p35.3 Tumor suppressor gene p15.5 Seq+ 88889 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP4R2-KIDINS220 PPP4R2 chr3 72998158 + KIDINS220 chr2 8779814 - Exonic hg38 ESCA TCGA-2H-A9GJ-01A 15 5 Out-of-frame Inter-chr p13 p25.1 Seq+ 88890 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-SUZ12P1 NF1 chr17 31095369 + SUZ12P1 chr17 30759491 + Exonic hg38 ESCA TCGA-2H-A9GJ-01A 14 4 CDS-5'UTR Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 88891 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPX2-RIF1 TPX2 chr20 31760179 + RIF1 chr2 151458811 + Exonic hg38 ESCA TCGA-2H-A9GJ-01A 11 3 Out-of-frame Inter-chr q11.21 q23.3 Seq+ 88892 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK10-UBTD2 STK10 chr5 172117481 - UBTD2 chr5 172234358 - Exonic hg38 ESCA TCGA-2H-A9GJ-01A 6 6 In-Frame Intra-chr q35.1 Tumor suppressor gene q35.1 Seq+ 88893 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANXA5-TRMT44 ANXA5 chr4 121677894 - TRMT44 chr4 8493266 + Exonic hg38 ESCA TCGA-2H-A9GM-01A 35 8 5'UTR-3'UTR Intra-chr q27 p16.1 Seq+ 88894 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2AK4-TMOD3 EIF2AK4 chr15 39955768 + TMOD3 chr15 51931031 + Exonic hg38 ESCA TCGA-2H-A9GN-01A 74 41 CDS-3'UTR Intra-chr q15.1 q21.2 Seq+ 88895 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRFN1-DLL3 LRFN1 chr19 39313931 - DLL3 chr19 39502815 + Exonic hg38 ESCA TCGA-2H-A9GN-01A 22 5 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 88896 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPCAT4-SPRED1 LPCAT4 chr15 34362196 - SPRED1 chr15 38299373 + Exonic hg38 ESCA TCGA-2H-A9GN-01A 21 6 In-Frame Intra-chr q14 q14 Seq+ 88897 ChimerSeq TCGA FAWG TCGA_RNA-Seq MINDY4-ZNRF2 MINDY4 chr7 30782212 + ZNRF2 chr7 30366035 + Exonic hg38 ESCA TCGA-2H-A9GN-01A 18 3 CDS-3'UTR Intra-chr p14.3 p14.3 88898 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNAI3-CYB561D1 GNAI3 chr1 109586882 + CYB561D1 chr1 109495143 + Exonic hg38 ESCA TCGA-2H-A9GN-01A 13 12 In-Frame Intra-chr p13.3 p13.3 Seq+ 88899 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALYREF-CCDC57 ALYREF chr17 81888441 - CCDC57 chr17 82155628 - Exonic hg38 ESCA TCGA-2H-A9GN-01A 14 2 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 88900 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R2A-DPYSL2 PPP2R2A chr8 26338987 + DPYSL2 chr8 26581969 + Exonic hg38 ESCA TCGA-2H-A9GQ-01A 43 19 In-Frame Intra-chr p21.2 p21.2 Seq+ 88901 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD3-LSM1 NSD3 chr8 38381799 - LSM1 chr8 38163840 - Exonic hg38 ESCA TCGA-2H-A9GQ-01A 15 5 5'UTR-CDS Intra-chr p11.23 Tumor suppressor gene p11.23 88902 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF111-TLN2 RNF111 chr15 58988068 + TLN2 chr15 62792641 + Exonic hg38 ESCA TCGA-2H-A9GQ-01A 14 9 5'UTR-CDS Intra-chr q22.1 Tumor suppressor gene q22.2 Seq+ 88903 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD1-ARMC9 PSMD1 chr2 231087181 + ARMC9 chr2 231331793 + Exonic hg38 ESCA TCGA-2H-A9GQ-01A 13 5 Out-of-frame Intra-chr q37.1 q37.1 Seq+ 88904 ChimerSeq TCGA FAWG TCGA_RNA-Seq IQCH-MAP2K5 IQCH chr15 67261394 + MAP2K5 chr15 67806646 + Exonic hg38 ESCA TCGA-2H-A9GQ-01A 10 4 In-Frame Intra-chr q23 q23 STE:STE7 Seq+ 88905 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4K5-L2HGDH MAP4K5 chr14 50434394 - L2HGDH chr14 50269330 - Exonic hg38 ESCA TCGA-2H-A9GQ-01A 9 7 Out-of-frame Intra-chr q22.1 q21.3 Seq+ 88906 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA7-PRELID1P1 NCOA7 chr6 125815404 + PRELID1P1 chr6 126643570 + Exonic hg38 ESCA TCGA-2H-A9GQ-01A 8 4 Out-of-frame Intra-chr q22.31 q22.32 Seq+ 88907 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKS1B-UHRF1BP1L ANKS1B chr12 99984104 - UHRF1BP1L chr12 100050318 - Exonic hg38 ESCA TCGA-2H-A9GQ-01A 7 4 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 88908 ChimerSeq TCGA FAWG TCGA_RNA-Seq D2HGDH-MLPH D2HGDH chr2 241744944 + MLPH chr2 237554705 + Exonic hg38 ESCA TCGA-2H-A9GR-01A 13 3 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 88909 ChimerSeq TCGA FAWG TCGA_RNA-Seq KPNA3-EBPL KPNA3 chr13 49792438 - EBPL chr13 49661208 - Exonic hg38 ESCA TCGA-2H-A9GR-01A 11 10 Out-of-frame Intra-chr q14.2 q14.2 Seq+ 88910 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASP7-TRUB1 CASP7 chr10 113697603 + TRUB1 chr10 114942645 + Exonic hg38 ESCA TCGA-IC-A6RE-01A 8 5 In-Frame Intra-chr q25.3 q25.3 Seq+ 88911 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF808-PIGX ZNF808 chr19 52543347 + PIGX chr3 196727923 + Exonic hg38 ESCA TCGA-IC-A6RF-01A 8 5 In-Frame Inter-chr q13.41 Transcription factor q29 88912 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTTN-KIRREL3 CTTN chr11 70398614 + KIRREL3 chr11 126473466 - Exonic hg38 ESCA TCGA-IG-A3I8-01A 228 59 5'UTR-CDS Intra-chr q13.3 q24.2 Seq+ 88913 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCPS-CCND1 DCPS chr11 126306744 + CCND1 chr11 69647994 + Exonic hg38 ESCA TCGA-IG-A3I8-01A 74 38 In-Frame Intra-chr q24.2 q13.3 Oncogene Seq+ 88914 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST3GAL4-C11orf70 ST3GAL4 chr11 126409411 + C11orf70 chr11 102058880 + Exonic hg38 ESCA TCGA-IG-A3I8-01A 56 31 Out-of-frame Intra-chr q24.2 q22.1 Seq+ 88915 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST3GAL4-FGF19 ST3GAL4 chr11 126355842 + FGF19 chr11 69703364 - Exonic hg38 ESCA TCGA-IG-A3I8-01A 31 19 5'UTR-CDS Intra-chr q24.2 q13.3 Seq+ 88916 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCPS-YAP1 DCPS chr11 126306744 + YAP1 chr11 102162456 + Exonic hg38 ESCA TCGA-IG-A3I8-01A 29 12 Out-of-frame Intra-chr q24.2 q22.1 Tumor suppressor gene Seq+ 88917 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNRF3-SLC5A1 ZNRF3 chr22 28884066 + SLC5A1 chr22 32049943 + Exonic hg38 ESCA TCGA-IG-A3I8-01A 15 1 In-Frame Intra-chr q12.1 q12.3 Seq+ 88918 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDON-CEP126 CDON chr11 125960903 - CEP126 chr11 101978347 + Exonic hg38 ESCA TCGA-IG-A3I8-01A 11 2 3'UTR-CDS Intra-chr q24.2 q22.1 88919 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCZ-LMNTD1 PRKCZ chr1 2059591 + LMNTD1 chr12 25549546 - Exonic hg38 ESCA TCGA-IG-A4QS-01A 20 26 Out-of-frame Inter-chr p36.33 p12.1 Tumor suppressor gene 88920 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFAF6-RALYL NDUFAF6 chr8 94895927 + RALYL chr8 84529299 + Exonic hg38 ESCA TCGA-IG-A4QS-01A 5 7 5'UTR-5'UTR Intra-chr q22.1 q21.2 Seq+ 88921 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF217-MAVS ZNF217 chr20 53571721 - MAVS chr20 3861332 + Exonic hg38 ESCA TCGA-IG-A50L-01A 26 15 3'UTR-CDS Intra-chr q13.2 Oncogene Transcription factor p13 Seq+ 88922 ChimerSeq TCGA FAWG TCGA_RNA-Seq FUS-IL9R FUS chr16 31182664 + IL9R chrY 57189426 + Exonic hg38 ESCA TCGA-IG-A51D-01A 6 7 In-Frame Inter-chr p11.2 Tumor suppressor gene q28 Seq+ 88923 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAZ2B-CFAP43 BAZ2B chr2 159616242 - CFAP43 chr10 104133784 - Exonic hg38 ESCA TCGA-IG-A5B8-01A 31 19 5'UTR-CDS Inter-chr q24.2 Transcription factor q25.1 88924 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIN52-AHSA1 LIN52 chr14 74084993 + AHSA1 chr14 77462160 + Exonic hg38 ESCA TCGA-IG-A6QS-01A 97 0 In-Frame Intra-chr q24.3 q24.3 Seq+ 88925 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF526-CEACAMP10 ZNF526 chr19 42220387 + CEACAMP10 chr19 43222958 - Exonic hg38 ESCA TCGA-IG-A6QS-01A 34 9 Out-of-frame Intra-chr q13.2 Transcription factor q13.31 Seq+ 88926 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUX1-SH2B2 CUX1 chr7 102205170 + SH2B2 chr7 102308815 + Exonic hg38 ESCA TCGA-IG-A6QS-01A 11 14 Out-of-frame Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 Seq+ 88927 ChimerSeq TCGA FAWG TCGA_RNA-Seq TASP1-SEL1L2 TASP1 chr20 13623446 - SEL1L2 chr20 13850319 - Exonic hg38 ESCA TCGA-IG-A6QS-01A 11 5 In-Frame Intra-chr p12.1 p12.1 Seq+ 88928 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPC1-AKR1E2 EPC1 chr10 32346763 - AKR1E2 chr10 4830675 + Exonic hg38 ESCA TCGA-IG-A8O2-01A 47 17 In-Frame Intra-chr p11.22 p15.1 Seq+ 88929 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARD3-NRXN1 PARD3 chr10 34696318 - NRXN1 chr2 50091494 - Exonic hg38 ESCA TCGA-IG-A8O2-01A 46 13 In-Frame Inter-chr p11.21 p16.3 Seq+ 88930 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL11A-HACD1 BCL11A chr2 60545971 - HACD1 chr10 17604047 - Exonic hg38 ESCA TCGA-IG-A8O2-01A 28 8 Out-of-frame Inter-chr p16.1 Oncogene Transcription factor p12.33 88931 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF418-USP25 ZNF418 chr19 57930428 - USP25 chr21 15831401 + Exonic hg38 ESCA TCGA-IG-A8O2-01A 15 1 Out-of-frame Inter-chr q13.43 Transcription factor q21.1 Seq+ 88932 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPP7-ZEB1 MPP7 chr10 28202153 - ZEB1 chr10 31502348 + Exonic hg38 ESCA TCGA-IG-A8O2-01A 14 2 Out-of-frame Intra-chr p12.1 p11.22 Transcription factor Seq+ 88933 ChimerSeq TCGA FAWG TCGA_RNA-Seq EML4-EPHA3 EML4 chr2 42301392 + EPHA3 chr3 89449225 + Exonic hg38 ESCA TCGA-IG-A8O2-01A 13 3 In-Frame Inter-chr p21 Oncogene p11.1 Oncogene Tumor suppressor gene Seq+ 88934 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANXA4-MEIG1 ANXA4 chr2 69788141 + MEIG1 chr10 14986796 + Exonic hg38 ESCA TCGA-IG-A8O2-01A 3 11 5'UTR-5'UTR Inter-chr p13.3 p13 88935 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHMP1A-FANCA CHMP1A chr16 89657582 - FANCA chr16 89784964 - Exonic hg38 ESCA TCGA-IG-A97H-01A 14 6 Out-of-frame Intra-chr q24.3 q24.3 Oncogene Seq+ 88936 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1G-IFT172 PPM1G chr2 27409303 - IFT172 chr2 27459522 - Exonic hg38 ESCA TCGA-IG-A97H-01A 12 7 Out-of-frame Intra-chr p23.3 p23.3 Seq+ 88937 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACAP2-XXYLT1 ACAP2 chr3 195442795 - XXYLT1 chr3 195070111 - Exonic hg38 ESCA TCGA-IG-A97H-01A 8 4 In-Frame Intra-chr q29 q29 Seq+ 88938 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-ANXA13 PVT1 chr8 127794734 + ANXA13 chr8 123712753 - Exonic hg38 ESCA TCGA-JY-A6F8-01A 79 56 5'UTR-CDS Intra-chr q24.21 q24.13 Seq+ 88939 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUSD6-SLC39A9 SUSD6 chr14 69703592 + SLC39A9 chr14 69442069 + Exonic hg38 ESCA TCGA-JY-A6F8-01A 56 29 In-Frame Intra-chr q24.1 q24.1 88940 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAF1-TESK2 FAF1 chr1 50655442 - TESK2 chr1 45355449 - Exonic hg38 ESCA TCGA-JY-A6F8-01A 41 8 In-Frame Intra-chr p32.3 p34.1 TKL:LISK Seq+ 88941 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR1204-ANXA13 MIR1204 chr8 127796008 + ANXA13 chr8 123712753 - Exonic hg38 ESCA TCGA-JY-A6F8-01A 39 13 5'UTR-CDS Intra-chr q24.21 q24.13 88942 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK2-DLG1 PAK2 chr3 196740157 + DLG1 chr3 197194589 - Exonic hg38 ESCA TCGA-JY-A6F8-01A 2 0 5'UTR-CDS Intra-chr q29 STE:STE20 q29 Tumor suppressor gene Seq+ 88943 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBTPS1-TAF1C MBTPS1 chr16 84087358 - TAF1C chr16 84180344 - Exonic hg38 ESCA TCGA-JY-A6FA-01A 170 82 In-Frame Intra-chr q24.1 q24.1 Seq+ 88944 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-PSMB3 ERBB2 chr17 39719834 + PSMB3 chr17 38760431 + Exonic hg38 ESCA TCGA-JY-A6FA-01A 21 7 CDS-3'UTR Intra-chr q12 Oncogene Seq+ 88945 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH13-WFDC1 CDH13 chr16 83486655 + WFDC1 chr16 84324419 + Exonic hg38 ESCA TCGA-JY-A6FA-01A 14 3 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q24.1 Tumor suppressor gene Seq+ 88946 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOP1-LPIN3 TOP1 chr20 41029455 + LPIN3 chr20 41345796 + Exonic hg38 ESCA TCGA-JY-A6FA-01A 13 4 CDS-5'UTR Intra-chr q12 Oncogene q12 Seq+ 88947 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD2AP-FAM69A CD2AP chr6 47478248 + FAM69A chr1 92876430 - Exonic hg38 ESCA TCGA-JY-A6FB-01A 29 2 Out-of-frame Inter-chr p12.3 p22.1 Seq+ 88948 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXP4-UBR2 FOXP4 chr6 41587897 + UBR2 chr6 42605721 + Exonic hg38 ESCA TCGA-JY-A6FB-01A 18 10 In-Frame Intra-chr p21.1 Oncogene Transcription factor p21.1 Seq+ 88949 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBR1-TGM5 UBR1 chr15 42998168 - TGM5 chr15 43260579 - Exonic hg38 ESCA TCGA-JY-A6FB-01A 9 6 In-Frame Intra-chr q15.2 q15.2 Seq+ 88950 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSP-LY86 DSP chr6 7542085 + LY86 chr6 6649625 + Exonic hg38 ESCA TCGA-JY-A6FD-01A 1236 573 Out-of-frame Intra-chr p24.3 Tumor suppressor gene p25.1 Seq+ 88951 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOV-ENPP2 NOV chr8 119419345 + ENPP2 chr8 119593860 - Exonic hg38 ESCA TCGA-JY-A6FD-01A 360 120 Out-of-frame Intra-chr q24.12 Tumor suppressor gene q24.12 Seq+ 88952 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2D-ARF3 KMT2D chr12 49049682 - ARF3 chr12 48941188 - Exonic hg38 ESCA TCGA-JY-A6FD-01A 92 24 CDS-5'UTR Intra-chr q13.12 Oncogene q13.12 Seq+ 88953 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R2A-ATCAY PPP2R2A chr8 26293740 + ATCAY chr19 3913758 + Exonic hg38 ESCA TCGA-JY-A6FD-01A 41 11 Out-of-frame Inter-chr p21.2 p13.3 Seq+ 88954 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL4I1-DYRK1B IL4I1 chr19 49927694 - DYRK1B chr19 39831968 - Exonic hg38 ESCA TCGA-JY-A6FD-01A 14 8 5'UTR-5'UTR Intra-chr q13.33 CMGC:DYRK Seq+ 88955 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP62-DYRK1B NUP62 chr19 49927694 - DYRK1B chr19 39831968 - Exonic hg38 ESCA TCGA-JY-A6FD-01A 14 8 5'UTR-5'UTR Intra-chr q13.33 CMGC:DYRK Seq+ 88956 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPG-GGCX CAPG chr2 85399204 - GGCX chr2 85554306 - Exonic hg38 ESCA TCGA-JY-A6FD-01A 13 11 Out-of-frame Intra-chr p11.2 Tumor suppressor gene p11.2 Seq+ 88957 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R37-RTN2 PPP1R37 chr19 45143633 + RTN2 chr19 45486113 - Exonic hg38 ESCA TCGA-JY-A6FD-01A 10 11 In-Frame Intra-chr q13.32 q13.32 Seq+ 88958 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEA1-LRRIQ1 EEA1 chr12 92929043 - LRRIQ1 chr12 85104004 + Exonic hg38 ESCA TCGA-JY-A6FE-01A 32 10 Out-of-frame Intra-chr q22 Transcription factor q21.31 Seq+ 88959 ChimerSeq TCGA FAWG TCGA_RNA-Seq FTO-ZNF423 FTO chr16 53704229 + ZNF423 chr16 49525494 - Exonic hg38 ESCA TCGA-JY-A6FE-01A 23 4 Out-of-frame Intra-chr q12.2 q12.1 Transcription factor Seq+ 88960 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND5A-SCUBE2 DENND5A chr11 9264961 - SCUBE2 chr11 9122894 - Exonic hg38 ESCA TCGA-JY-A6FE-01A 15 6 5'UTR-5'UTR Intra-chr p15.4 p15.4 Tumor suppressor gene Seq+ 88961 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDGFRA-FIP1L1 PDGFRA chr4 54230606 + FIP1L1 chr4 53452920 + Exonic hg38 ESCA TCGA-JY-A6FE-01A 2 0 5'UTR-CDS Intra-chr q12 Oncogene q12 KB Seq+ 88962 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM1-YARS PUM1 chr1 31059204 - YARS chr1 32811057 - Exonic hg38 ESCA TCGA-JY-A6FH-01A 197 92 In-Frame Intra-chr p35.2 p35.1 Seq+ 88963 ChimerSeq TCGA FAWG TCGA_RNA-Seq U2AF2-KIR3DL2 U2AF2 chr19 55659345 + KIR3DL2 chr19 54851998 + Exonic hg38 ESCA TCGA-JY-A6FH-01A 93 34 CDS-3'UTR Intra-chr q13.42 Seq+ 88964 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAX1BP1-CHN2 TAX1BP1 chr7 27787603 + CHN2 chr7 29354625 + Exonic hg38 ESCA TCGA-JY-A6FH-01A 59 17 Out-of-frame Intra-chr p15.2 p14.3 Seq+ 88965 ChimerSeq TCGA FAWG TCGA_RNA-Seq DRAM1-SYCP3 DRAM1 chr12 101877920 + SYCP3 chr12 101735044 - Exonic hg38 ESCA TCGA-JY-A6FH-01A 50 19 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 88966 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R13B-L2HGDH PPP1R13B chr14 103847299 - L2HGDH chr14 50284033 - Exonic hg38 ESCA TCGA-JY-A6FH-01A 42 22 In-Frame Intra-chr q32.33 q21.3 Seq+ 88967 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYB561D2-SLC38A3 CYB561D2 chr3 50351560 + SLC38A3 chr3 50214149 + Exonic hg38 ESCA TCGA-JY-A6FH-01A 37 30 5'UTR-5'UTR Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 88968 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCA4-SLC44A2 SMARCA4 chr19 10996544 + SLC44A2 chr19 10634756 + Exonic hg38 ESCA TCGA-JY-A6FH-01A 25 11 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 88969 ChimerSeq TCGA FAWG TCGA_RNA-Seq URI1-PDCD5 URI1 chr19 29942664 + PDCD5 chr19 32582195 + Exonic hg38 ESCA TCGA-JY-A6FH-01A 22 22 In-Frame Intra-chr q12 q13.11 Tumor suppressor gene Seq+ 88970 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFAP1L2-GLUD1P2 AFAP1L2 chr10 114404440 - GLUD1P2 chr10 46772484 - Exonic hg38 ESCA TCGA-JY-A6FH-01A 26 5 CDS-3'UTR Intra-chr q25.3 Tumor suppressor gene q11.22 Seq+ 88971 ChimerSeq TCGA FAWG TCGA_RNA-Seq NELFB-FBXW5 NELFB chr9 137267346 + FBXW5 chr9 136941684 - Exonic hg38 ESCA TCGA-JY-A6FH-01A 21 14 In-Frame Intra-chr q34.3 q34.3 Seq+ 88972 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC16A9-CCDC6 SLC16A9 chr10 59709479 - CCDC6 chr10 59793111 - Exonic hg38 ESCA TCGA-JY-A6FH-01A 17 11 5'UTR-CDS Intra-chr q21.2 q21.2 Seq+ 88973 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHG5-KHDRBS1 PLEKHG5 chr1 6519445 - KHDRBS1 chr1 32030298 + Exonic hg38 ESCA TCGA-JY-A6FH-01A 16 10 In-Frame Intra-chr p36.31 Oncogene p35.2 Seq+ 88974 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC37B-RAB11FIP4 LRRC37B chr17 32008132 + RAB11FIP4 chr17 31517651 + Exonic hg38 ESCA TCGA-JY-A6FH-01A 16 3 5'UTR-5'UTR Intra-chr q11.2 q11.2 Seq+ 88975 ChimerSeq TCGA FAWG TCGA_RNA-Seq RABEP1-ZFP3 RABEP1 chr17 5332152 + ZFP3 chr17 5091497 + Exonic hg38 ESCA TCGA-JY-A6FH-01A 15 3 CDS-5'UTR Intra-chr p13.2 p13.2 Transcription factor Seq+ 88976 ChimerSeq TCGA FAWG TCGA_RNA-Seq TYW1-DMTF1 TYW1 chr7 67117618 + DMTF1 chr7 87166483 + Exonic hg38 ESCA TCGA-JY-A6FH-01A 15 2 Out-of-frame Intra-chr q11.21 q21.12 Tumor suppressor gene Transcription factor Seq+ 88977 ChimerSeq TCGA FAWG TCGA_RNA-Seq C3-ZNF556 C3 chr19 6690629 - ZNF556 chr19 2873496 + Exonic hg38 ESCA TCGA-JY-A938-01A 28 8 In-Frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 88978 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC2A12-SAMD3 SLC2A12 chr6 134052378 - SAMD3 chr6 130313093 - Exonic hg38 ESCA TCGA-JY-A938-01A 12 6 CDS-5'UTR Intra-chr q23.2 q23.1 Seq+ 88979 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRK-ARHGAP18 PTPRK chr6 128184432 - ARHGAP18 chr6 129618852 - Exonic hg38 ESCA TCGA-JY-A938-01A 11 2 5'UTR-CDS Intra-chr Tumor suppressor gene q22.33 Seq+ 88980 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM26-DHX16 TRIM26 chr6 30213305 - DHX16 chr6 30660242 - Exonic hg38 ESCA TCGA-JY-A939-01A 374 67 5'UTR-5'UTR Intra-chr Seq+ 88981 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPIDR-BLK SPIDR chr8 47294030 + BLK chr8 11543224 + Exonic hg38 ESCA TCGA-JY-A93E-01A 13 3 5'UTR-5'UTR Intra-chr q11.21 p23.1 TK:Src Seq+ 88982 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAGOHB-YBX3 MAGOHB chr12 10609831 - YBX3 chr12 10713333 - Exonic hg38 ESCA TCGA-L5-A43C-01A 15 3 In-Frame Intra-chr p13.2 p13.2 Transcription factor 88983 ChimerSeq TCGA FAWG TCGA_RNA-Seq IMPA2-GNAL IMPA2 chr18 11981765 + GNAL chr18 11862395 + Exonic hg38 ESCA TCGA-L5-A43C-01A 11 2 Out-of-frame Intra-chr p11.21 p11.21 Seq+ 88984 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST13-ST8SIA3 ST13 chr22 40848294 - ST8SIA3 chr18 57352476 + Exonic hg38 ESCA TCGA-L5-A43E-01A 19 3 CDS-5'UTR Inter-chr q13.2 Tumor suppressor gene q21.31 Seq+ 88985 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLRX3-SGMS1 GLRX3 chr10 130136512 + SGMS1 chr10 50519921 - Exonic hg38 ESCA TCGA-L5-A43E-01A 15 10 5'UTR-5'UTR Intra-chr q26.3 q11.23 Tumor suppressor gene Seq+ 88986 ChimerSeq TCGA FAWG TCGA_RNA-Seq FDFT1-YWHAZ FDFT1 chr8 11826215 + YWHAZ chr8 100925039 - Exonic hg38 ESCA TCGA-L5-A43I-01A 100 7 5'UTR-CDS Intra-chr p23.1 q22.3 Seq+ 88987 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEMF-SOS2 NEMF chr14 49813988 - SOS2 chr14 50145596 - Exonic hg38 ESCA TCGA-L5-A43I-01A 25 3 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 88988 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHPN2-CLASRP RHPN2 chr19 33026504 - CLASRP chr19 45070537 + Exonic hg38 ESCA TCGA-L5-A43I-01A 24 0 Out-of-frame Intra-chr q13.11 q13.32 Seq+ 88989 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNMT1-OLFM2 DNMT1 chr19 10135736 - OLFM2 chr19 9857861 - Exonic hg38 ESCA TCGA-L5-A43I-01A 22 6 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene Transcription factor p13.2 Seq+ 88990 ChimerSeq TCGA FAWG TCGA_RNA-Seq NADSYN1-SPAG9 NADSYN1 chr11 71482025 + SPAG9 chr17 50970856 - Exonic hg38 ESCA TCGA-L5-A43I-01A 22 6 In-Frame Inter-chr q13.4 q21.33 Seq+ 88991 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTR2-GGACT ACTR2 chr2 65269573 + GGACT chr13 100530469 - Exonic hg38 ESCA TCGA-L5-A43I-01A 18 1 Out-of-frame Inter-chr p14 TKL:STKR q32.3 88992 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMYM2-LATS2 ZMYM2 chr13 19960026 + LATS2 chr13 21046230 - Exonic hg38 ESCA TCGA-L5-A43I-01A 14 2 5'UTR-5'UTR Intra-chr q12.11 q12.11 AGC:NDR Tumor suppressor gene Seq+ 88993 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP5C-AP2S1 PPP5C chr19 46353989 + AP2S1 chr19 46846142 - Exonic hg38 ESCA TCGA-L5-A43J-01A 37 19 In-Frame Intra-chr q13.32 q13.32 Seq+ 88994 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIN1-PDE4C PIN1 chr19 9838648 + PDE4C chr19 18233400 - Exonic hg38 ESCA TCGA-L5-A43J-01A 17 3 5'UTR-5'UTR Intra-chr p13.2 Tumor suppressor gene Transcription factor p13.11 Seq+ 88995 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADIPOR2-CASK ADIPOR2 chr12 1691213 + CASK chrX 41524034 - Exonic hg38 ESCA TCGA-L5-A43M-01A 151 19 3'UTR-CDS Inter-chr p13.33 p11.4 CAMK:CASK Seq+ 88996 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAGP-TBC1D30 SMAGP chr12 51269245 - TBC1D30 chr12 64843380 + Exonic hg38 ESCA TCGA-L5-A43M-01A 41 15 Out-of-frame Intra-chr q13.13 q14.3 Seq+ 88997 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREBBP-ADCY9 CREBBP chr16 3879832 - ADCY9 chr16 3993510 - Exonic hg38 ESCA TCGA-L5-A43M-01A 35 8 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 88998 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASXL2-HADHA ASXL2 chr2 25878166 - HADHA chr2 26209889 - Exonic hg38 ESCA TCGA-L5-A43M-01A 27 1 In-Frame Intra-chr p23.3 p23.3 Seq+ 88999 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOC2L-CCNL2 NOC2L chr1 951127 - CCNL2 chr1 1390563 - Exonic hg38 ESCA TCGA-L5-A43M-01A 21 2 In-Frame Intra-chr p36.33 p36.33 89000 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSP2-MAGEB16 CTDSP2 chr12 57846372 - MAGEB16 chrX 35802131 + Exonic hg38 ESCA TCGA-L5-A43M-01A 20 5 CDS-5'UTR Inter-chr q14.1 p21.1 Seq+ 89001 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDIA3-MFAP1 PDIA3 chr15 43771458 + MFAP1 chr15 43809875 - Exonic hg38 ESCA TCGA-L5-A43M-01A 12 5 Out-of-frame Intra-chr q15.3 q15.3 Seq+ 89002 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERN1-MYCBPAP ERN1 chr17 64075175 - MYCBPAP chr17 50517293 + Exonic hg38 ESCA TCGA-L5-A43M-01A 12 4 Out-of-frame Intra-chr q23.3 q21.33 Seq+ 89003 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK1A1-PDE6A CSNK1A1 chr5 149505447 - PDE6A chr5 149884867 - Exonic hg38 ESCA TCGA-L5-A43M-01A 7 2 Out-of-frame Intra-chr q32 Tumor suppressor gene q32 Seq+ 89004 ChimerSeq TCGA FAWG TCGA_RNA-Seq CARS-SLC22A18AS CARS chr11 3006879 - SLC22A18AS chr11 2888635 - Exonic hg38 ESCA TCGA-L5-A4OF-01A 157 25 5'UTR-5'UTR Intra-chr Seq+ 89005 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNRPD1-OSBPL1A SNRPD1 chr18 21612443 + OSBPL1A chr18 24377535 - Exonic hg38 ESCA TCGA-L5-A4OF-01A 35 13 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 89006 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFF4-RPL34 AFF4 chr5 132879677 - RPL34 chr4 108620576 + Exonic hg38 ESCA TCGA-L5-A4OF-01A 18 31 Out-of-frame Inter-chr q31.1 q25 Seq+ 89007 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOS2-MYO18A NOS2 chr17 27798700 - MYO18A chr17 29122253 - Exonic hg38 ESCA TCGA-L5-A4OH-01A 12 7 Out-of-frame Intra-chr q11.2 q11.2 Oncogene Seq+ 89008 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATA4-TRIB1 GATA4 chr8 11708928 + TRIB1 chr8 125436006 + Exonic hg38 ESCA TCGA-L5-A4OJ-01A 17 6 5'UTR-CDS Intra-chr p23.1 Tumor suppressor gene Transcription factor q24.13 Seq+ 89009 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP8-TRPM7 USP8 chr15 50424514 + TRPM7 chr15 50592626 - Exonic hg38 ESCA TCGA-L5-A4OJ-01A 2 0 5'UTR-CDS Intra-chr q21.2 q21.2 Seq+ 89010 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF519-PKP4 ZNF519 chr18 14124350 - PKP4 chr2 158680488 + Exonic hg38 ESCA TCGA-L5-A4OM-01A 10 2 Out-of-frame Inter-chr p11.21 Transcription factor q24.1 89011 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC23B-KAT14 SEC23B chr20 18515736 + KAT14 chr20 18181710 + Exonic hg38 ESCA TCGA-L5-A4ON-01A 68 20 In-Frame Intra-chr p11.23 p11.23 89012 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAH11-IGKJ4 DNAH11 chr7 21738821 + IGKJ4 chr2 88860921 - Exonic hg38 ESCA TCGA-L5-A4OO-01A 916 0 Out-of-frame Inter-chr p15.3 p11.2 89013 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNND1-CLPB CTNND1 chr11 57810223 + CLPB chr11 72380384 - Exonic hg38 ESCA TCGA-L5-A4OO-01A 39 18 Out-of-frame Intra-chr q12.1 Tumor suppressor gene q13.4 Seq+ 89014 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP8A1-SHISA3 ATP8A1 chr4 42522160 - SHISA3 chr4 42401012 + Exonic hg38 ESCA TCGA-L5-A4OO-01A 17 5 Out-of-frame Intra-chr p13 p13 Tumor suppressor gene Seq+ 89015 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOXD11-CIR1 HOXD11 chr2 176109358 + CIR1 chr2 174351725 - Exonic hg38 ESCA TCGA-L5-A4OQ-01A 156 25 3'UTR-CDS Intra-chr q31.1 Transcription factor q31.1 89016 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOXD10-CIR1 HOXD10 chr2 176109358 + CIR1 chr2 174351725 - Exonic hg38 ESCA TCGA-L5-A4OQ-01A 156 23 5'UTR-CDS Intra-chr q31.1 Transcription factor q31.1 89017 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM102A-WDR93 FAM102A chr9 127953575 - WDR93 chr15 89743292 + Exonic hg38 ESCA TCGA-L5-A4OQ-01A 139 24 Out-of-frame Inter-chr q34.11 q26.1 Seq+ 89018 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPC4AP-RBM39 TRPC4AP chr20 35069296 - RBM39 chr20 35716805 - Exonic hg38 ESCA TCGA-L5-A4OQ-01A 130 29 In-Frame Intra-chr q11.22 q11.22 Seq+ 89019 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNNA1-EGR1 CTNNA1 chr5 138827718 + EGR1 chr5 138466757 + Exonic hg38 ESCA TCGA-L5-A4OQ-01A 128 23 Out-of-frame Intra-chr q31.2 Oncogene q31.2 Tumor suppressor gene Transcription factor Seq+ 89020 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM118A-UPK3A FAM118A chr22 45310183 + UPK3A chr22 45293181 + Exonic hg38 ESCA TCGA-L5-A4OQ-01A 97 38 5'UTR-CDS Intra-chr q13.31 q13.31 Seq+ 89021 ChimerSeq TCGA FAWG TCGA_RNA-Seq TATDN2-FANCD2 TATDN2 chr3 10249614 + FANCD2 chr3 10101188 + Exonic hg38 ESCA TCGA-L5-A4OQ-01A 55 40 In-Frame Intra-chr p25.3 p25.3 Oncogene Seq+ 89022 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPF1-CIR1 WIPF1 chr2 174597601 - CIR1 chr2 174351725 - Exonic hg38 ESCA TCGA-L5-A4OQ-01A 59 16 5'UTR-CDS Intra-chr q31.1 q31.1 89023 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHN1-AS2 CHN1 chr2 174846931 - AS2 chr2 176136999 - Exonic hg38 ESCA TCGA-L5-A4OQ-01A 50 18 Out-of-frame Intra-chr q31.1 89024 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACACA-LASP1 ACACA chr17 37179262 - LASP1 chr17 38878084 + Exonic hg38 ESCA TCGA-L5-A4OQ-01A 47 26 Out-of-frame Intra-chr q12 Seq+ 89025 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK6-C3P1 DOCK6 chr19 11213176 - C3P1 chr19 10073917 + Exonic hg38 ESCA TCGA-L5-A4OQ-01A 46 17 CDS-5'UTR Intra-chr p13.2 p13.2 89026 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACROD1-BAD MACROD1 chr11 64151239 - BAD chr11 64284376 - Exonic hg38 ESCA TCGA-L5-A4OQ-01A 40 8 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 89027 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP32-RBFOX3 USP32 chr17 60345481 - RBFOX3 chr17 79307824 - Exonic hg38 ESCA TCGA-L5-A4OQ-01A 39 5 CDS-5'UTR Intra-chr q23.2 q25.3 Seq+ 89028 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBA2-MIER2 UBA2 chr19 34450364 + MIER2 chr19 334542 - Exonic hg38 ESCA TCGA-L5-A4OQ-01A 35 9 In-Frame Intra-chr q13.11 p13.3 Seq+ 89029 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPHB2-ZBTB40 EPHB2 chr1 22785076 + ZBTB40 chr1 22517300 + Exonic hg38 ESCA TCGA-L5-A4OQ-01A 30 7 In-Frame Intra-chr p36.12 Tumor suppressor gene p36.12 Transcription factor Seq+ 89030 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPPL2B-DOT1L SPPL2B chr19 2334721 + DOT1L chr19 2232303 + Exonic hg38 ESCA TCGA-L5-A4OQ-01A 30 4 CDS-3'UTR Intra-chr p13.3 p13.3 Oncogene Transcription factor 89031 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOXD10-WIPF1 HOXD10 chr2 176119501 + WIPF1 chr2 174597668 - Exonic hg38 ESCA TCGA-L5-A4OQ-01A 30 3 Out-of-frame Intra-chr q31.1 Transcription factor q31.1 89032 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAIAP2L2-TMEM184B BAIAP2L2 chr22 38097032 - TMEM184B chr22 38231334 - Exonic hg38 ESCA TCGA-L5-A4OQ-01A 27 8 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 89033 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA6-TRPC4AP NCOA6 chr20 34825472 - TRPC4AP chr20 35049994 - Exonic hg38 ESCA TCGA-L5-A4OQ-01A 26 12 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 89034 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD54L-MAST2 RAD54L chr1 46250119 + MAST2 chr1 46032596 + Exonic hg38 ESCA TCGA-L5-A4OQ-01A 25 4 In-Frame Intra-chr p34.1 p34.1 AGC:MAST Seq+ 89035 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYH14-GPR19 MYH14 chr19 50210770 + GPR19 chr12 12695511 - Exonic hg38 ESCA TCGA-L5-A4OQ-01A 22 9 CDS-5'UTR Inter-chr q13.33 p13.1 Seq+ 89036 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHPN2-BRSK1 RHPN2 chr19 33064784 - BRSK1 chr19 55287007 + Exonic hg38 ESCA TCGA-L5-A4OQ-01A 20 13 Out-of-frame Intra-chr q13.11 q13.42 CAMK:CAMKL Tumor suppressor gene Seq+ 89037 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM222B-MYO18A FAM222B chr17 28842682 - MYO18A chr17 29082438 - Exonic hg38 ESCA TCGA-L5-A4OQ-01A 17 18 5'UTR-CDS Intra-chr q11.2 q11.2 Oncogene Seq+ 89038 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLK1-KCNH7 TLK1 chr2 171117739 - KCNH7 chr2 162537080 - Exonic hg38 ESCA TCGA-L5-A4OQ-01A 19 7 Out-of-frame Intra-chr q31.1 Other:TLK q24.2 Seq+ 89039 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS33A-ABCB9 VPS33A chr12 122249871 - ABCB9 chr12 122950565 - Exonic hg38 ESCA TCGA-L5-A4OQ-01A 18 2 In-Frame Intra-chr q24.31 q24.31 Seq+ 89040 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBFB-NAE1 CBFB chr16 67036755 + NAE1 chr16 66823600 - Exonic hg38 ESCA TCGA-L5-A4OQ-01A 17 5 In-Frame Intra-chr q22.1 q22.1 Seq+ 89041 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP214-ABL1 NUP214 chr9 131151894 + ABL1 chr9 130872129 + Exonic hg38 ESCA TCGA-L5-A4OQ-01A 15 10 In-Frame Intra-chr q34.13 Oncogene q34.12 TK:Abl Oncogene KB Pub Seq+ 89042 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOXD3-CHN1 HOXD3 chr2 176136999 + CHN1 chr2 174812482 - Exonic hg38 ESCA TCGA-L5-A4OQ-01A 16 4 5'UTR-CDS Intra-chr q31.1 Transcription factor q31.1 Seq+ 89043 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN4-CFAP221 PTPN4 chr2 119900806 + CFAP221 chr2 119549085 + Exonic hg38 ESCA TCGA-L5-A4OQ-01A 14 4 Out-of-frame Intra-chr q14.2 q14.2 89044 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX27-PIP5K1A SNX27 chr1 151683445 + PIP5K1A chr1 151239955 + Exonic hg38 ESCA TCGA-L5-A4OQ-01A 14 4 In-Frame Intra-chr q21.3 q21.3 Seq+ 89045 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL27A1-ZNF618 COL27A1 chr9 114292210 + ZNF618 chr9 113969117 + Exonic hg38 ESCA TCGA-L5-A4OQ-01A 14 2 In-Frame Intra-chr q32 q32 Transcription factor Seq+ 89046 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMC3-MXI1 SMC3 chr10 110590572 + MXI1 chr10 110279180 + Exonic hg38 ESCA TCGA-L5-A4OQ-01A 11 12 In-Frame Intra-chr q25.2 q25.2 Tumor suppressor gene Transcription factor Seq+ 89047 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBL-PHLDB1 CBL chr11 119206612 + PHLDB1 chr11 118613816 + Exonic hg38 ESCA TCGA-L5-A4OQ-01A 12 4 CDS-5'UTR Intra-chr q23.3 Oncogene Tumor suppressor gene q23.3 Seq+ 89048 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC31A-FAM175A SEC31A chr4 82891088 - FAM175A chr4 83482244 - Exonic hg38 ESCA TCGA-L5-A4OQ-01A 11 6 Out-of-frame Intra-chr q21.22 q21.23 Seq+ 89049 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASSF3-TBK1 RASSF3 chr12 64610743 + TBK1 chr12 64480012 + Exonic hg38 ESCA TCGA-L5-A4OQ-01A 4 1 Out-of-frame Intra-chr q14.2 Tumor suppressor gene q14.2 Other:IKK Seq+ 89050 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPC1-ARHGAP28 EPC1 chr10 32291163 - ARHGAP28 chr18 6873409 + Exonic hg38 ESCA TCGA-L5-A4OR-01A 127 35 In-Frame Inter-chr p11.22 p11.31 Seq+ 89051 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP28-L3MBTL4 ARHGAP28 chr18 6873775 + L3MBTL4 chr18 6301957 - Exonic hg38 ESCA TCGA-L5-A4OR-01A 105 6 In-Frame Intra-chr p11.31 p11.31 Tumor suppressor gene Transcription factor Seq+ 89052 ChimerSeq TCGA FAWG TCGA_RNA-Seq L3MBTL4-LDLRAD4 L3MBTL4 chr18 6301903 - LDLRAD4 chr18 13438244 + Exonic hg38 ESCA TCGA-L5-A4OR-01A 68 0 In-Frame Intra-chr p11.31 Tumor suppressor gene Transcription factor p11.21 89053 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTGES3-SPATS2 PTGES3 chr12 56687998 - SPATS2 chr12 49514555 + Exonic hg38 ESCA TCGA-L5-A4OR-01A 19 5 In-Frame Intra-chr q13.3 q13.12 Seq+ 89054 ChimerSeq TCGA FAWG TCGA_RNA-Seq BLM-CRAT37 BLM chr15 90717440 + CRAT37 chr15 91473221 + Exonic hg38 ESCA TCGA-L5-A4OR-01A 9 10 5'UTR-5'UTR Intra-chr q26.1 Oncogene Tumor suppressor gene q26.1 89055 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOM1-RNF32 NOM1 chr7 156954298 + RNF32 chr7 156675696 + Exonic hg38 ESCA TCGA-L5-A4OS-01A 80 40 In-Frame Intra-chr q36.3 q36.3 Seq+ 89056 ChimerSeq TCGA FAWG TCGA_RNA-Seq JUP-KLHL11 JUP chr17 41762983 - KLHL11 chr17 41855321 - Exonic hg38 ESCA TCGA-L5-A4OS-01A 58 30 Out-of-frame Intra-chr q21.2 Tumor suppressor gene q21.2 Seq+ 89057 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSMF-ZMYND19 NSMF chr9 137452365 - ZMYND19 chr9 137582686 - Exonic hg38 ESCA TCGA-L5-A4OS-01A 51 24 In-Frame Intra-chr q34.3 q34.3 Seq+ 89058 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBL-TRAPPC4 CBL chr11 119287946 + TRAPPC4 chr11 119023321 + Exonic hg38 ESCA TCGA-L5-A4OS-01A 35 32 CDS-3'UTR Intra-chr q23.3 Oncogene Tumor suppressor gene Seq+ 89059 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAT2-ANKRD52 STAT2 chr12 56360058 - ANKRD52 chr12 56248870 - Exonic hg38 ESCA TCGA-L5-A4OS-01A 37 5 5'UTR-CDS Intra-chr q13.3 Transcription factor q13.3 Seq+ 89060 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNAPC4-ABCA2 SNAPC4 chr9 136400134 - ABCA2 chr9 137024236 - Exonic hg38 ESCA TCGA-L5-A4OS-01A 37 3 5'UTR-CDS Intra-chr q34.3 Transcription factor q34.3 89061 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF1-CFLAR SMURF1 chr7 99143726 - CFLAR chr2 201129729 + Exonic hg38 ESCA TCGA-L5-A4OS-01A 32 17 CDS-5'UTR Inter-chr q33.1 Seq+ 89062 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAFF-RCOR1 MAFF chr22 38202212 + RCOR1 chr14 102681895 + Exonic hg38 ESCA TCGA-L5-A4OS-01A 20 8 5'UTR-CDS Inter-chr q13.1 Transcription factor q32.31 Seq+ 89063 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACOT7-PLEKHG5 ACOT7 chr1 6281102 - PLEKHG5 chr1 6496569 - Exonic hg38 ESCA TCGA-L5-A4OS-01A 16 11 Out-of-frame Intra-chr p36.31 p36.31 Oncogene Seq+ 89064 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0368-C9orf84 KIAA0368 chr9 111472897 - C9orf84 chr9 111748199 - Exonic hg38 ESCA TCGA-L5-A4OS-01A 17 6 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 89065 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTL8-ACOX1 ACTL8 chr1 17755504 + ACOX1 chr17 75978693 - Exonic hg38 ESCA TCGA-L5-A4OS-01A 16 8 5'UTR-5'UTR Inter-chr p36.13 q25.1 Seq+ 89066 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF21A-LEUTX PHF21A chr11 46120935 - LEUTX chr19 39784527 + Exonic hg38 ESCA TCGA-L5-A4OS-01A 16 7 3'UTR-3'UTR Inter-chr p11.2 Transcription factor Transcription factor Seq+ 89067 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRAMP1-IFT140 CRAMP1 chr16 1614985 + IFT140 chr16 1571534 - Exonic hg38 ESCA TCGA-L5-A4OS-01A 13 5 Out-of-frame Intra-chr p13.3 p13.3 89068 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKFY1-CCDC88C ANKFY1 chr17 4242256 - CCDC88C chr14 91291084 - Exonic hg38 ESCA TCGA-L5-A4OS-01A 13 3 In-Frame Inter-chr p13.2 q32.12 Seq+ 89069 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT11-GARNL3 SEPT11 chr4 77015017 + GARNL3 chr9 127243079 + Exonic hg38 ESCA TCGA-L5-A4OS-01A 12 3 Out-of-frame Inter-chr q21.1 q33.3 Seq+ 89070 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB2-PADI1 GRB2 chr17 75321659 - PADI1 chr1 17244010 + Exonic hg38 ESCA TCGA-L5-A4OS-01A 11 6 CDS-3'UTR Inter-chr q25.1 Seq+ 89071 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNA1D-GNL3 CACNA1D chr3 53770552 + GNL3 chr3 52690592 + Exonic hg38 ESCA TCGA-L5-A4OS-01A 9 11 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 89072 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSEN54-TMEM94 TSEN54 chr17 75523779 + TMEM94 chr17 75489576 + Exonic hg38 ESCA TCGA-L5-A4OS-01A 11 3 Out-of-frame Intra-chr q25.1 q25.1 89073 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM200A-CYP3A5 FAM200A chr7 99551854 - CYP3A5 chr7 99667065 - Exonic hg38 ESCA TCGA-L5-A4OS-01A 9 6 5'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 89074 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL27A1-ZNF618 COL27A1 chr9 114237715 + ZNF618 chr9 113988321 + Exonic hg38 ESCA TCGA-L5-A4OS-01A 9 3 Out-of-frame Intra-chr q32 q32 Transcription factor Seq+ 89075 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAF1-C9orf153 RAF1 chr3 12587591 - C9orf153 chr9 86235107 - Exonic hg38 ESCA TCGA-L5-A4OS-01A 5 17 CDS-5'UTR Inter-chr p25.2 TKL:RAF Oncogene q21.33 Seq+ 89076 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF3L-TRIOBP EIF3L chr22 37878171 + TRIOBP chr22 37710427 + Exonic hg38 ESCA TCGA-L5-A4OS-01A 7 6 In-Frame Intra-chr q13.1 q13.1 Seq+ 89077 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH3-C16orf70 CDH3 chr16 68645750 + C16orf70 chr16 67120112 + Exonic hg38 ESCA TCGA-L5-A4OS-01A 3 13 In-Frame Intra-chr q22.1 q22.1 Seq+ 89078 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK3-COX6C STK3 chr8 98706467 - COX6C chr8 99887618 - Exonic hg38 ESCA TCGA-L5-A4OT-01A 76 21 In-Frame Intra-chr q22.2 q22.2 Seq+ 89079 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPKAPK5-TRAFD1 MAPKAPK5 chr12 111871180 + TRAFD1 chr12 112130511 + Exonic hg38 ESCA TCGA-L5-A4OT-01A 17 12 CDS-5'UTR Intra-chr q24.12 CAMK:MAPKAPK q24.13 Transcription factor Seq+ 89080 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAD5-IKZF3 ATAD5 chr17 30869646 + IKZF3 chr17 39766493 - Exonic hg38 ESCA TCGA-L5-A4OU-01A 79 16 In-Frame Intra-chr q11.2 q21.1 Tumor suppressor gene Transcription factor Seq+ 89081 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPZA2-STYXL1 CAPZA2 chr7 116888190 + STYXL1 chr7 76028703 - Exonic hg38 ESCA TCGA-L5-A4OU-01A 19 12 In-Frame Intra-chr q31.2 q11.23 Seq+ 89082 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICALL2-ZFAND2A MICALL2 chr7 1459184 - ZFAND2A chr7 1158257 - Exonic hg38 ESCA TCGA-L5-A4OU-01A 18 7 CDS-5'UTR Intra-chr p22.3 p22.3 Seq+ 89083 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM60-HIP1 TMEM60 chr7 77798254 - HIP1 chr7 75549001 - Exonic hg38 ESCA TCGA-L5-A4OU-01A 12 2 5'UTR-CDS Intra-chr q11.23 q11.23 Seq+ 89084 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIPK2-CPSF4 HIPK2 chr7 139777605 - CPSF4 chr7 99444789 + Exonic hg38 ESCA TCGA-L5-A4OU-01A 11 1 In-Frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q22.1 Seq+ 89085 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGS1-BPTF PGS1 chr17 78404089 + BPTF chr17 67920015 + Exonic hg38 ESCA TCGA-L5-A4OW-01A 176 41 In-Frame Intra-chr q25.3 q24.2 Transcription factor Seq+ 89086 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANSL1-GAST KANSL1 chr17 46223671 - GAST chr17 41715432 + Exonic hg38 ESCA TCGA-L5-A4OW-01A 82 86 5'UTR-5'UTR Intra-chr q21.2 Seq+ 89087 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT9-BAIAP2 SEPT9 chr17 77307197 + BAIAP2 chr17 81115770 + Exonic hg38 ESCA TCGA-L5-A4OW-01A 87 27 Out-of-frame Intra-chr q25.3 Seq+ 89088 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBCD-CCDC57 TBCD chr17 82814934 + CCDC57 chr17 82101866 - Exonic hg38 ESCA TCGA-L5-A4OW-01A 86 27 5'UTR-CDS Intra-chr q25.3 Seq+ 89089 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAT3-NOS2 STAT3 chr17 42388279 - NOS2 chr17 27789688 - Exonic hg38 ESCA TCGA-L5-A4OW-01A 81 17 5'UTR-CDS Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q11.2 Seq+ 89090 ChimerSeq TCGA FAWG TCGA_RNA-Seq JUP-TTLL6 JUP chr17 41768969 - TTLL6 chr17 48787999 - Exonic hg38 ESCA TCGA-L5-A4OW-01A 66 20 In-Frame Intra-chr q21.2 Tumor suppressor gene q21.32 Seq+ 89091 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV4-TCAP ETV4 chr17 43532674 - TCAP chr17 39665716 + Exonic hg38 ESCA TCGA-L5-A4OW-01A 56 10 Out-of-frame Intra-chr q21.31 Oncogene Transcription factor q12 Seq+ 89092 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTLL6-NOS2 TTLL6 chr17 48784923 - NOS2 chr17 27789688 - Exonic hg38 ESCA TCGA-L5-A4OW-01A 32 20 Out-of-frame Intra-chr q21.32 q11.2 Seq+ 89093 ChimerSeq TCGA FAWG TCGA_RNA-Seq KRIT1-CDK6 KRIT1 chr7 92242034 - CDK6 chr7 92618207 - Exonic hg38 ESCA TCGA-L5-A4OW-01A 33 0 Out-of-frame Intra-chr q21.2 Tumor suppressor gene q21.2 CMGC:CDK Oncogene Tumor suppressor gene Seq+ 89094 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBOAT1-TPMT MBOAT1 chr6 20212136 - TPMT chr6 18149171 - Exonic hg38 ESCA TCGA-L5-A4OW-01A 17 3 CDS-5'UTR Intra-chr p22.3 p22.3 Seq+ 89095 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPMT-BTBD9 TPMT chr6 18148988 - BTBD9 chr6 38345093 - Exonic hg38 ESCA TCGA-L5-A4OW-01A 15 4 In-Frame Intra-chr p22.3 p21.2 Seq+ 89096 ChimerSeq TCGA FAWG TCGA_RNA-Seq CWC25-LPCAT1 CWC25 chr17 38806297 - LPCAT1 chr5 1489858 - Exonic hg38 ESCA TCGA-L5-A4OW-01A 14 1 5'UTR-3'UTR Inter-chr q12 Seq+ 89097 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-CDK12 FBXL20 chr17 39401361 - CDK12 chr17 39501250 + Exonic hg38 ESCA TCGA-L5-A4OW-01A 10 5 Out-of-frame Intra-chr q12 q12 Oncogene Seq+ 89098 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDXK-KLF10 PDXK chr21 43734123 + KLF10 chr8 102652397 - Exonic hg38 ESCA TCGA-L5-A4OX-01A 36 4 Out-of-frame Inter-chr q22.3 q22.3 Tumor suppressor gene Transcription factor Seq+ 89099 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAT5B-NSRP1 STAT5B chr17 42276248 - NSRP1 chr17 30172542 + Exonic hg38 ESCA TCGA-L5-A4OX-01A 28 4 5'UTR-5'UTR Intra-chr q21.2 Transcription factor q11.2 Seq+ 89100 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYRK1A-DENND3 DYRK1A chr21 37367628 + DENND3 chr8 141175200 + Exonic hg38 ESCA TCGA-L5-A4OX-01A 11 5 5'UTR-5'UTR Inter-chr q22.13 CMGC:DYRK q24.3 Seq+ 89101 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNDC3B-TNIK FNDC3B chr3 172133546 + TNIK chr3 171347218 - Exonic hg38 ESCA TCGA-L5-A88S-01A 29 16 CDS-3'UTR Intra-chr q26.31 q26.31 STE:STE20 Seq+ 89102 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHC3-NCEH1 PHC3 chr3 170113360 - NCEH1 chr3 172648114 - Exonic hg38 ESCA TCGA-L5-A88S-01A 18 8 Out-of-frame Intra-chr q26.2 Tumor suppressor gene q26.31 Seq+ 89103 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHC3-FNDC3B PHC3 chr3 170113360 - FNDC3B chr3 172397164 + Exonic hg38 ESCA TCGA-L5-A88S-01A 17 8 Out-of-frame Intra-chr q26.2 Tumor suppressor gene q26.31 Seq+ 89104 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-PSMB3 ERBB2 chr17 39719834 + PSMB3 chr17 38760431 + Exonic hg38 ESCA TCGA-L5-A88V-01A 11613 4425 CDS-3'UTR Intra-chr q12 Oncogene Seq+ 89105 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB7-PIP4K2B GRB7 chr17 39742716 + PIP4K2B chr17 38771272 - Exonic hg38 ESCA TCGA-L5-A88V-01A 1281 358 CDS-5'UTR Intra-chr q12 q12 Seq+ 89106 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD3-FBXL20 STARD3 chr17 39637231 + FBXL20 chr17 39303639 - Exonic hg38 ESCA TCGA-L5-A88V-01A 62 14 5'UTR-CDS Intra-chr q12 q12 Seq+ 89107 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK12-NEUROD2 CDK12 chr17 39492890 + NEUROD2 chr17 39608065 - Exonic hg38 ESCA TCGA-L5-A88V-01A 12 4 CDS-5'UTR Intra-chr q12 Oncogene q12 Transcription factor Seq+ 89108 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRF2-TNFRSF21 ADGRF2 chr6 47663577 + TNFRSF21 chr6 47253521 - Exonic hg38 ESCA TCGA-L5-A88Y-01A 37 25 5'UTR-CDS Intra-chr p12.3 p12.3 89109 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA1-CYP2C19 PLEKHA1 chr10 122400388 + CYP2C19 chr10 94842837 + Exonic hg38 ESCA TCGA-L5-A88Y-01A 28 12 In-Frame Intra-chr q26.13 q23.33 Oncogene Seq+ 89110 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAT1-PPP1R18 ATAT1 chr6 30628430 + PPP1R18 chr6 30686575 - Exonic hg38 ESCA TCGA-L5-A88Y-01A 13 2 3'UTR-5'UTR Intra-chr p21.33 Seq+ 89111 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP1S-CEACAM6 MAP1S chr19 17724208 + CEACAM6 chr19 41766183 + Exonic hg38 ESCA TCGA-L5-A891-01A 920 767 Out-of-frame Intra-chr p13.11 q13.2 Seq+ 89112 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID3A-PRPF31 ARID3A chr19 932742 + PRPF31 chr19 54131307 + Exonic hg38 ESCA TCGA-L5-A891-01A 289 143 CDS-3'UTR Intra-chr p13.3 Transcription factor Seq+ 89113 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO46-ZNF90 FBXO46 chr19 45730849 - ZNF90 chr19 20105221 + Exonic hg38 ESCA TCGA-L5-A891-01A 210 12 5'UTR-CDS Intra-chr q13.32 p12 Transcription factor Seq+ 89114 ChimerSeq TCGA FAWG TCGA_RNA-Seq B9D2-REEP6 B9D2 chr19 41363432 - REEP6 chr19 1495294 + Exonic hg38 ESCA TCGA-L5-A891-01A 118 63 In-Frame Intra-chr q13.2 p13.3 Seq+ 89115 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKD2-KLHL26 PRKD2 chr19 46700799 - KLHL26 chr19 18667664 + Exonic hg38 ESCA TCGA-L5-A891-01A 68 35 In-Frame Intra-chr q13.32 p13.11 Seq+ 89116 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB21-TFF1 ZBTB21 chr21 42010252 - TFF1 chr21 42363407 - Exonic hg38 ESCA TCGA-L5-A891-01A 43 114 5'UTR-CDS Intra-chr q22.3 Transcription factor q22.3 Seq+ 89117 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAZAP1-ZNF226 DAZAP1 chr19 1422396 + ZNF226 chr19 44174984 + Exonic hg38 ESCA TCGA-L5-A891-01A 60 29 In-Frame Intra-chr p13.3 q13.31 Transcription factor Seq+ 89118 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA5-OR7E28P LAMA5 chr20 62351704 - OR7E28P chr2 158862406 + Exonic hg38 ESCA TCGA-L5-A891-01A 50 32 Out-of-frame Inter-chr q13.33 q24.1 Seq+ 89119 ChimerSeq TCGA FAWG TCGA_RNA-Seq CARM1-PLA2G4C CARM1 chr19 10871922 + PLA2G4C chr19 48055049 - Exonic hg38 ESCA TCGA-L5-A891-01A 47 41 Out-of-frame Intra-chr p13.2 q13.33 Seq+ 89120 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA5-DAPL1 LAMA5 chr20 62351704 - DAPL1 chr2 158862406 + Exonic hg38 ESCA TCGA-L5-A891-01A 45 32 CDS-3'UTR Inter-chr q13.33 q24.1 Seq+ 89121 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJB1-TRPM4 DNAJB1 chr19 14527687 - TRPM4 chr19 49200300 + Exonic hg38 ESCA TCGA-L5-A891-01A 33 9 5'UTR-CDS Intra-chr p13.12 Tumor suppressor gene q13.33 Seq+ 89122 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF542P-ANGPTL6 ZNF542P chr19 56368936 + ANGPTL6 chr19 10094938 - Exonic hg38 ESCA TCGA-L5-A891-01A 28 16 5'UTR-CDS Intra-chr q13.43 p13.2 89123 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATAD2A-ZNF350 GATAD2A chr19 19386138 + ZNF350 chr19 51974531 - Exonic hg38 ESCA TCGA-L5-A891-01A 27 19 5'UTR-5'UTR Intra-chr p13.11 Transcription factor q13.41 Transcription factor Seq+ 89124 ChimerSeq TCGA FAWG TCGA_RNA-Seq GIPR-RBM42 GIPR chr19 45670734 + RBM42 chr19 35637158 + Exonic hg38 ESCA TCGA-L5-A891-01A 25 18 In-Frame Intra-chr q13.32 q13.12 Seq+ 89125 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUPT5H-ZSCAN5A SUPT5H chr19 39476313 + ZSCAN5A chr19 56225048 - Exonic hg38 ESCA TCGA-L5-A891-01A 23 18 Out-of-frame Intra-chr q13.2 q13.43 Transcription factor Seq+ 89126 ChimerSeq TCGA FAWG TCGA_RNA-Seq OLA1-GPR155 OLA1 chr2 174223033 - GPR155 chr2 174461672 - Exonic hg38 ESCA TCGA-L5-A891-01A 20 9 In-Frame Intra-chr q31.1 q31.1 Seq+ 89127 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIP5K1B-PGM5 PIP5K1B chr9 68876794 + PGM5 chr9 68479418 + Exonic hg38 ESCA TCGA-L5-A891-01A 17 7 Out-of-frame Intra-chr q21.11 q21.11 Seq+ 89128 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM4-JAK3 R3HDM4 chr19 913087 - JAK3 chr19 17843172 - Exonic hg38 ESCA TCGA-L5-A891-01A 14 15 Out-of-frame Intra-chr p13.3 p13.11 TK:JakA Oncogene Seq+ 89129 ChimerSeq TCGA FAWG TCGA_RNA-Seq LSR-NLRP2 LSR chr19 35250659 + NLRP2 chr19 54969999 + Exonic hg38 ESCA TCGA-L5-A891-01A 14 10 CDS-3'UTR Intra-chr q13.12 Seq+ 89130 ChimerSeq TCGA FAWG TCGA_RNA-Seq WASF2-FGR WASF2 chr1 27489986 - FGR chr1 27625151 - Exonic hg38 ESCA TCGA-L5-A891-01A 15 6 5'UTR-5'UTR Intra-chr p36.11 p35.3 TK:Src Seq+ 89131 ChimerSeq TCGA FAWG TCGA_RNA-Seq EVI5L-PTPRS EVI5L chr19 7850122 + PTPRS chr19 5225844 - Exonic hg38 ESCA TCGA-L5-A891-01A 15 2 In-Frame Intra-chr p13.2 p13.3 Seq+ 89132 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF417-CNFN ZNF417 chr19 57916379 - CNFN chr19 42389039 - Exonic hg38 ESCA TCGA-L5-A891-01A 14 2 CDS-5'UTR Intra-chr q13.43 Transcription factor q13.2 Seq+ 89133 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASXL1-TPX2 ASXL1 chr20 32369123 + TPX2 chr20 31771560 + Exonic hg38 ESCA TCGA-L5-A891-01A 12 7 Out-of-frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 89134 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRS-MBD3 PTPRS chr19 5211590 - MBD3 chr19 1582712 - Exonic hg38 ESCA TCGA-L5-A891-01A 12 6 Out-of-frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 89135 ChimerSeq TCGA FAWG TCGA_RNA-Seq PROSC-TTLL10 PROSC chr8 37776016 + TTLL10 chr1 1179189 + Exonic hg38 ESCA TCGA-L5-A891-01A 11 3 Out-of-frame Inter-chr p36.33 Seq+ 89136 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF541-C19orf68 ZNF541 chr19 47544126 - C19orf68 chr19 48194653 + Exonic hg38 ESCA TCGA-L5-A891-01A 10 7 Out-of-frame Intra-chr q13.33 Transcription factor q13.33 Seq+ 89137 ChimerSeq TCGA FAWG TCGA_RNA-Seq HKR1-CEACAM7 HKR1 chr19 37347872 + CEACAM7 chr19 41687221 - Exonic hg38 ESCA TCGA-L5-A891-01A 10 6 Out-of-frame Intra-chr q13.12 Transcription factor Seq+ 89138 ChimerSeq TCGA FAWG TCGA_RNA-Seq CARD8-MYH14 CARD8 chr19 48255792 - MYH14 chr19 50248987 + Exonic hg38 ESCA TCGA-L5-A891-01A 9 9 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 89139 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRL1-LGALS4 ADGRL1 chr19 14170707 - LGALS4 chr19 38813141 - Exonic hg38 ESCA TCGA-L5-A891-01A 10 4 Out-of-frame Intra-chr p13.12 89140 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIM2-MORC3 SIM2 chr21 36731151 + MORC3 chr21 36349311 + Exonic hg38 ESCA TCGA-L5-A891-01A 9 6 Out-of-frame Intra-chr q22.13 Transcription factor q22.12 Seq+ 89141 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAD3B-INTS11 ATAD3B chr1 1472089 + INTS11 chr1 1315618 - Exonic hg38 ESCA TCGA-L5-A891-01A 9 2 Out-of-frame Intra-chr p36.33 p36.33 89142 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLF9-FOXRED2 KLF9 chr9 70412859 - FOXRED2 chr22 36493803 - Exonic hg38 ESCA TCGA-L5-A891-01A 9 2 5'UTR-CDS Inter-chr q21.12 Transcription factor q12.3 Seq+ 89143 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA7-NKAIN2 NCOA7 chr6 125791067 + NKAIN2 chr6 124791339 + Exonic hg38 ESCA TCGA-L5-A891-01A 7 10 5'UTR-CDS Intra-chr q22.31 q22.31 Seq+ 89144 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF790-C19orf45 ZNF790 chr19 36850002 - C19orf45 chr19 7505324 + Exonic hg38 ESCA TCGA-L5-A891-01A 7 6 Out-of-frame Intra-chr q13.12 Transcription factor Seq+ 89145 ChimerSeq TCGA FAWG TCGA_RNA-Seq HK2-ZNF121 HK2 chr2 74874449 + ZNF121 chr19 9569082 - Exonic hg38 ESCA TCGA-L5-A891-01A 7 4 CDS-5'UTR Inter-chr p12 p13.2 Transcription factor Seq+ 89146 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HCC1-GRIK5 R3HCC1 chr8 23290469 + GRIK5 chr19 42022354 - Exonic hg38 ESCA TCGA-L5-A891-01A 6 7 In-Frame Inter-chr p21.3 q13.2 Seq+ 89147 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R13L-MBOAT7 PPP1R13L chr19 45382527 - MBOAT7 chr19 54174431 - Exonic hg38 ESCA TCGA-L5-A891-01A 5 8 CDS-5'UTR Intra-chr q13.32 Seq+ 89148 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF614-FXYD5 ZNF614 chr19 52015643 - FXYD5 chr19 35169566 + Exonic hg38 ESCA TCGA-L5-A891-01A 4 7 3'UTR-3'UTR Intra-chr q13.41 Transcription factor q13.12 Seq+ 89149 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1A-WDTC1 ARID1A chr1 26697540 + WDTC1 chr1 27260956 + Exonic hg38 ESCA TCGA-L5-A893-01A 15 7 CDS-5'UTR Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 Seq+ 89150 ChimerSeq TCGA FAWG TCGA_RNA-Seq DVL1-CCNL2 DVL1 chr1 1335620 - CCNL2 chr1 1388510 - Exonic hg38 ESCA TCGA-L5-A8NE-01A 81 65 3'UTR-3'UTR Intra-chr p36.33 p36.33 Seq+ 89151 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP170B-AUNIP CEP170B chr14 104865513 + AUNIP chr1 25837554 - Exonic hg38 ESCA TCGA-L5-A8NE-01A 81 25 5'UTR-CDS Inter-chr q32.33 p36.11 Seq+ 89152 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR762HG-PKIG MIR762HG chr16 30876118 + PKIG chr20 44589797 + Exonic hg38 ESCA TCGA-L5-A8NE-01A 59 20 5'UTR-5'UTR Inter-chr p11.2 q13.12 89153 ChimerSeq TCGA FAWG TCGA_RNA-Seq FA2H-KARS FA2H chr16 74740023 - KARS chr16 75631855 - Exonic hg38 ESCA TCGA-L5-A8NE-01A 58 13 In-Frame Intra-chr q23.1 q23.1 Seq+ 89154 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPSB3-ECI1 SPSB3 chr16 1782502 - ECI1 chr16 2243224 - Exonic hg38 ESCA TCGA-L5-A8NE-01A 55 11 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 89155 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR3H-FAM87B POLR3H chr22 41540699 - FAM87B chr1 818723 + Exonic hg38 ESCA TCGA-L5-A8NE-01A 45 7 CDS-5'UTR Inter-chr q13.2 p36.33 Seq+ 89156 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCT4-BIRC6 CCT4 chr2 61880286 - BIRC6 chr2 32531355 + Exonic hg38 ESCA TCGA-L5-A8NE-01A 39 22 In-Frame Intra-chr p15 p22.3 Seq+ 89157 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK1-CIDEA ROCK1 chr18 21111475 - CIDEA chr18 12262825 + Exonic hg38 ESCA TCGA-L5-A8NE-01A 33 6 5'UTR-5'UTR Intra-chr q11.1 AGC:DMPK p11.21 Seq+ 89158 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC3-CDCP1 ZDHHC3 chr3 44917910 - CDCP1 chr3 45089141 - Exonic hg38 ESCA TCGA-L5-A8NE-01A 29 10 5'UTR-CDS Intra-chr p21.31 Tumor suppressor gene Seq+ 89159 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA7-USH1C PLEKHA7 chr11 17013989 - USH1C chr11 17501980 - Exonic hg38 ESCA TCGA-L5-A8NE-01A 28 12 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 89160 ChimerSeq TCGA FAWG TCGA_RNA-Seq IP6K1-UBA7 IP6K1 chr3 49786354 - UBA7 chr3 49810183 - Exonic hg38 ESCA TCGA-L5-A8NE-01A 27 10 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 89161 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-XRRA1 PPFIA1 chr11 70272436 + XRRA1 chr11 74848462 - Exonic hg38 ESCA TCGA-L5-A8NE-01A 26 11 In-Frame Intra-chr q13.3 q13.4 Seq+ 89162 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM83G-B9D1 FAM83G chr17 18988247 - B9D1 chr17 19357951 - Exonic hg38 ESCA TCGA-L5-A8NE-01A 26 7 In-Frame Intra-chr p11.2 p11.2 Seq+ 89163 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA7-KHDC3L PLEKHA7 chr11 17013989 - KHDC3L chr6 73362717 + Exonic hg38 ESCA TCGA-L5-A8NE-01A 23 7 CDS-5'UTR Inter-chr p15.1 q13 Seq+ 89164 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXW5-ENTPD2 FBXW5 chr9 136941343 - ENTPD2 chr9 137052348 - Exonic hg38 ESCA TCGA-L5-A8NE-01A 22 6 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 89165 ChimerSeq TCGA FAWG TCGA_RNA-Seq AK4-NDC1 AK4 chr1 65190829 + NDC1 chr1 53828173 - Exonic hg38 ESCA TCGA-L5-A8NE-01A 20 6 In-Frame Intra-chr p31.3 p32.3 Seq+ 89166 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A20-SLC26A6 SLC25A20 chr3 48898690 - SLC26A6 chr3 48626685 - Exonic hg38 ESCA TCGA-L5-A8NE-01A 19 10 In-Frame Intra-chr p21.31 p21.31 89167 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLPP2-CDC34 PLPP2 chr19 281358 - CDC34 chr19 535837 + Exonic hg38 ESCA TCGA-L5-A8NE-01A 19 3 3'UTR-CDS Intra-chr p13.3 p13.3 89168 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMG2-OSBPL1A PSMG2 chr18 12703164 + OSBPL1A chr18 24334330 - Exonic hg38 ESCA TCGA-L5-A8NE-01A 15 10 Out-of-frame Intra-chr p11.21 q11.2 Seq+ 89169 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIA1-SNRPG TIA1 chr2 70216208 - SNRPG chr2 70281684 - Exonic hg38 ESCA TCGA-L5-A8NE-01A 14 5 In-Frame Intra-chr p13.3 p13.3 Seq+ 89170 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTNB-ASXL2 DTNB chr2 25596086 - ASXL2 chr2 25768868 - Exonic hg38 ESCA TCGA-L5-A8NE-01A 12 5 In-Frame Intra-chr p23.3 p23.3 Seq+ 89171 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNAI2-SLC38A3 GNAI2 chr3 50236453 + SLC38A3 chr3 50214149 + Exonic hg38 ESCA TCGA-L5-A8NE-01A 11 7 5'UTR-5'UTR Intra-chr p21.31 p21.31 Seq+ 89172 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGM2L1-PRNCR1 PGM2L1 chr11 74398051 - PRNCR1 chr8 127086764 + Exonic hg38 ESCA TCGA-L5-A8NE-01A 11 7 CDS-5'UTR Inter-chr q13.4 q24.21 89173 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDLIM2-SORBS3 PDLIM2 chr8 22591668 + SORBS3 chr8 22554452 + Exonic hg38 ESCA TCGA-L5-A8NE-01A 10 6 CDS-5'UTR Intra-chr p21.3 p21.3 Seq+ 89174 ChimerSeq TCGA FAWG TCGA_RNA-Seq KHDC1-SLC17A5 KHDC1 chr6 73291998 - SLC17A5 chr6 73615447 - Exonic hg38 ESCA TCGA-L5-A8NE-01A 9 8 Out-of-frame Intra-chr q13 q13 Seq+ 89175 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM39-C22orf24 RBM39 chr20 35738968 - C22orf24 chr22 31938115 - Exonic hg38 ESCA TCGA-L5-A8NF-01A 231 130 5'UTR-5'UTR Inter-chr q11.22 q12.3 Seq+ 89176 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAIAP2L1-ANKIB1 BAIAP2L1 chr7 98304196 - ANKIB1 chr7 92294889 + Exonic hg38 ESCA TCGA-L5-A8NF-01A 35 19 CDS-5'UTR Intra-chr q22.1 q21.2 Seq+ 89177 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D15-PTPRR TBC1D15 chr12 71873003 + PTPRR chr12 70892977 - Exonic hg38 ESCA TCGA-L5-A8NF-01A 20 10 Out-of-frame Intra-chr q21.1 q15 Seq+ 89178 ChimerSeq TCGA FAWG TCGA_RNA-Seq CORO2A-NCBP1 CORO2A chr9 98122653 - NCBP1 chr9 97640794 + Exonic hg38 ESCA TCGA-L5-A8NF-01A 14 8 3'UTR-CDS Intra-chr q22.33 q22.33 Seq+ 89179 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP3CB-USP54 PPP3CB chr10 73444725 - USP54 chr10 73505426 - Exonic hg38 ESCA TCGA-L5-A8NF-01A 12 3 In-Frame Intra-chr q22.2 q22.2 Seq+ 89180 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANGAP1-POLR3H RANGAP1 chr22 41284901 - POLR3H chr22 41533687 - Exonic hg38 ESCA TCGA-L5-A8NF-01A 6 11 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 89181 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA7-MSRB3 ITGA7 chr12 55715919 - MSRB3 chr12 65326826 + Exonic hg38 ESCA TCGA-L5-A8NF-01A 5 7 5'UTR-CDS Intra-chr q13.2 Tumor suppressor gene q14.3 Seq+ 89182 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM33-TMEM120A RBM33 chr7 155644919 + TMEM120A chr7 75989224 - Exonic hg38 ESCA TCGA-L5-A8NG-01A 105 41 Out-of-frame Intra-chr q36.3 q11.23 Seq+ 89183 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED24-NR1D1 MED24 chr17 40021955 - NR1D1 chr17 40097403 - Exonic hg38 ESCA TCGA-L5-A8NG-01A 38 7 In-Frame Intra-chr q21.1 q21.1 Transcription factor Seq+ 89184 ChimerSeq TCGA FAWG TCGA_RNA-Seq ECSIT-RGL3 ECSIT chr19 11513056 - RGL3 chr19 11397597 - Exonic hg38 ESCA TCGA-L5-A8NG-01A 23 10 In-Frame Intra-chr p13.2 p13.2 Seq+ 89185 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBL-ZNF829 FBL chr19 39836556 - ZNF829 chr19 36915251 - Exonic hg38 ESCA TCGA-L5-A8NG-01A 11 7 5'UTR-5'UTR Intra-chr q13.12 Transcription factor Seq+ 89186 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM134C-AP2B1 FAM134C chr17 42586765 - AP2B1 chr17 35674176 + Exonic hg38 ESCA TCGA-L5-A8NH-01A 65 23 Out-of-frame Intra-chr q12 Seq+ 89187 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPT1A-RNFT1 CPT1A chr11 68759569 - RNFT1 chr17 59954146 - Exonic hg38 ESCA TCGA-L5-A8NH-01A 63 23 In-Frame Inter-chr q13.3 q23.1 Seq+ 89188 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTP4A1-NOTCH3 PTP4A1 chr6 63572719 + NOTCH3 chr19 15170170 - Exonic hg38 ESCA TCGA-L5-A8NH-01A 18 4 5'UTR-CDS Inter-chr q12 p13.12 Oncogene Tumor suppressor gene Seq+ 89189 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP6V0A1-STAT3 ATP6V0A1 chr17 42514460 + STAT3 chr17 42346713 - Exonic hg38 ESCA TCGA-L5-A8NH-01A 14 4 In-Frame Intra-chr q21.2 q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 89190 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACP7-ACTN4 ACP7 chr19 39085390 + ACTN4 chr19 38704934 + Exonic hg38 ESCA TCGA-L5-A8NI-01A 278 79 CDS-3'UTR Intra-chr q13.2 89191 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSH2-EPCAM MSH2 chr2 47403402 + EPCAM chr2 47385166 + Exonic hg38 ESCA TCGA-L5-A8NI-01A 143 56 Out-of-frame Intra-chr p21 Oncogene Tumor suppressor gene p21 Seq+ 89192 ChimerSeq TCGA FAWG TCGA_RNA-Seq IST1-DHX38 IST1 chr16 71895589 + DHX38 chr16 72096139 + Exonic hg38 ESCA TCGA-L5-A8NI-01A 121 32 5'UTR-5'UTR Intra-chr q22.2 q22.2 Seq+ 89193 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM5A-NINJ2 KDM5A chr12 320995 - NINJ2 chr12 566178 - Exonic hg38 ESCA TCGA-L5-A8NI-01A 70 10 In-Frame Intra-chr p13.33 Tumor suppressor gene p13.33 Seq+ 89194 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT5B-RNPS1 KMT5B chr11 68213477 - RNPS1 chr16 2255726 - Exonic hg38 ESCA TCGA-L5-A8NI-01A 53 34 5'UTR-CDS Inter-chr q13.2 p13.3 89195 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLPH3-IKZF3 GOLPH3 chr5 32173810 - IKZF3 chr17 39788374 - Exonic hg38 ESCA TCGA-L5-A8NI-01A 42 22 Out-of-frame Inter-chr p13.3 q21.1 Tumor suppressor gene Transcription factor Seq+ 89196 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB6A-TPCN2 RAB6A chr11 73760566 - TPCN2 chr11 69159446 + Exonic hg38 ESCA TCGA-L5-A8NI-01A 43 18 CDS-3'UTR Intra-chr q13.4 q13.3 89197 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNK2-SUSD3 WNK2 chr9 93268746 + SUSD3 chr9 93075784 + Exonic hg38 ESCA TCGA-L5-A8NI-01A 39 18 In-Frame Intra-chr q22.31 Tumor suppressor gene q22.31 Seq+ 89198 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF292-SLC35A1 ZNF292 chr6 87155759 + SLC35A1 chr6 87500508 + Exonic hg38 ESCA TCGA-L5-A8NI-01A 40 9 Out-of-frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q15 Seq+ 89199 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM102A-EMSY FAM102A chr9 127979992 - EMSY chr11 76544259 + Exonic hg38 ESCA TCGA-L5-A8NI-01A 30 26 Out-of-frame Inter-chr q34.11 q13.5 89200 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2C-SND1 KMT2C chr7 152435626 - SND1 chr7 127807484 + Exonic hg38 ESCA TCGA-L5-A8NI-01A 34 9 Out-of-frame Intra-chr q36.1 Oncogene Tumor suppressor gene q32.1 Seq+ 89201 ChimerSeq TCGA FAWG TCGA_RNA-Seq RELB-ZNF227 RELB chr19 45028992 + ZNF227 chr19 44234702 + Exonic hg38 ESCA TCGA-L5-A8NI-01A 28 5 Out-of-frame Intra-chr q13.32 Transcription factor q13.31 Transcription factor Seq+ 89202 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM14-CORO2A TRIM14 chr9 98118982 - CORO2A chr9 98137688 - Exonic hg38 ESCA TCGA-L5-A8NI-01A 26 6 In-Frame Intra-chr q22.33 q22.33 Seq+ 89203 ChimerSeq TCGA FAWG TCGA_RNA-Seq NISCH-DNAH1 NISCH chr3 52458844 + DNAH1 chr3 52379905 + Exonic hg38 ESCA TCGA-L5-A8NI-01A 24 7 In-Frame Intra-chr p21.1 p21.1 Seq+ 89204 ChimerSeq TCGA FAWG TCGA_RNA-Seq MUC5AC-IRF8 MUC5AC chr11 1175270 + IRF8 chr16 85908990 + Exonic hg38 ESCA TCGA-L5-A8NI-01A 19 9 3'UTR-CDS Inter-chr q24.1 Tumor suppressor gene Transcription factor 89205 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R2A-MATR3 PPP2R2A chr8 26293740 + MATR3 chr5 139314675 + Exonic hg38 ESCA TCGA-L5-A8NI-01A 20 3 Out-of-frame Inter-chr p21.2 q31.2 Seq+ 89206 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETHE1-PLAUR ETHE1 chr19 43526515 - PLAUR chr19 43655573 - Exonic hg38 ESCA TCGA-L5-A8NI-01A 18 10 In-Frame Intra-chr q13.31 q13.31 Seq+ 89207 ChimerSeq TCGA FAWG TCGA_RNA-Seq USF2-ZNF30 USF2 chr19 35270003 + ZNF30 chr19 34942594 + Exonic hg38 ESCA TCGA-L5-A8NI-01A 17 8 CDS-5'UTR Intra-chr q13.12 Transcription factor q13.11 Transcription factor Seq+ 89208 ChimerSeq TCGA FAWG TCGA_RNA-Seq THRAP3-ARHGEF10L THRAP3 chr1 36224505 + ARHGEF10L chr1 17580553 + Exonic hg38 ESCA TCGA-L5-A8NI-01A 15 6 5'UTR-5'UTR Intra-chr p34.3 p36.13 Seq+ 89209 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHROOM3-LUC7L SHROOM3 chr4 76586469 + LUC7L chr16 208188 - Exonic hg38 ESCA TCGA-L5-A8NI-01A 12 6 Out-of-frame Inter-chr q21.1 p13.3 Seq+ 89210 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1671-CNIH3 KIAA1671 chr22 25049364 + CNIH3 chr1 224680958 + Exonic hg38 ESCA TCGA-L5-A8NI-01A 11 6 In-Frame Inter-chr q11.23 q42.12 Seq+ 89211 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D14-MRFAP1 TBC1D14 chr4 6924111 + MRFAP1 chr4 6640828 + Exonic hg38 ESCA TCGA-L5-A8NI-01A 10 5 CDS-5'UTR Intra-chr p16.1 p16.1 Seq+ 89212 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM160-ZC3H4 TMEM160 chr19 47046593 - ZC3H4 chr19 47082295 - Exonic hg38 ESCA TCGA-L5-A8NI-01A 10 4 Out-of-frame Intra-chr q13.32 q13.32 Seq+ 89213 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA3-APOBEC1 LAMA3 chr18 23939386 + APOBEC1 chr12 7652835 - Exonic hg38 ESCA TCGA-L5-A8NJ-01A 58 7 In-Frame Inter-chr q11.2 p13.31 Seq+ 89214 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP5-PAK2 SENP5 chr3 196868073 + PAK2 chr3 196827196 + Exonic hg38 ESCA TCGA-L5-A8NJ-01A 26 0 5'UTR-CDS Intra-chr q29 q29 STE:STE20 Seq+ 89215 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLFN13-APBA3 SLFN13 chr17 35439075 - APBA3 chr19 3751774 - Exonic hg38 ESCA TCGA-L5-A8NL-01A 21 1 Out-of-frame Inter-chr q12 p13.3 89216 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-SCN4A BCAS3 chr17 61084564 + SCN4A chr17 63961431 - Exonic hg38 ESCA TCGA-L5-A8NL-01A 14 0 In-Frame Intra-chr q23.2 q23.3 Seq+ 89217 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC2-TSHZ2 TANC2 chr17 63319090 + TSHZ2 chr20 53487144 + Exonic hg38 ESCA TCGA-L5-A8NL-01A 13 2 CDS-3'UTR Inter-chr q23.2 q13.2 Transcription factor Seq+ 89218 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN2-L3MBTL4 PTPN2 chr18 12814203 - L3MBTL4 chr18 5969562 - Exonic hg38 ESCA TCGA-L5-A8NL-01A 13 1 Out-of-frame Intra-chr p11.21 Tumor suppressor gene p11.31 Tumor suppressor gene Transcription factor Seq+ 89219 ChimerSeq TCGA FAWG TCGA_RNA-Seq REEP3-RTKN2 REEP3 chr10 63599283 + RTKN2 chr10 62246057 - Exonic hg38 ESCA TCGA-L5-A8NR-01A 9 6 Out-of-frame Intra-chr q21.3 q21.2 Seq+ 89220 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTX4-FAM111B DTX4 chr11 59199773 + FAM111B chr11 59124179 + Exonic hg38 ESCA TCGA-L5-A8NS-01A 14 5 In-Frame Intra-chr q12.1 q12.1 Seq+ 89221 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIDN-C19orf38 MIDN chr19 1255694 + C19orf38 chr19 10848441 + Exonic hg38 ESCA TCGA-L5-A8NS-01A 12 4 CDS-5'UTR Intra-chr p13.3 p13.2 Seq+ 89222 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARAP1-IL12RB2 ARAP1 chr11 72693325 - IL12RB2 chr1 67350870 + Exonic hg38 ESCA TCGA-L5-A8NS-01A 9 1 In-Frame Inter-chr q13.4 p31.3 Seq+ 89223 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAN1C1-CFAP46 MAN1C1 chr1 25749335 + CFAP46 chr10 132872824 - Exonic hg38 ESCA TCGA-L5-A8NS-01A 7 3 In-Frame Inter-chr p36.11 q26.3 89224 ChimerSeq TCGA FAWG TCGA_RNA-Seq AAMDC-TMEM135 AAMDC chr11 77821241 + TMEM135 chr11 87295782 + Exonic hg38 ESCA TCGA-L5-A8NS-01A 4 7 5'UTR-5'UTR Intra-chr q14.1 q14.2 Seq+ 89225 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRP2-KLF7 NRP2 chr2 205766803 + KLF7 chr2 207088581 - Exonic hg38 ESCA TCGA-L5-A8NT-01A 190 127 In-Frame Intra-chr q33.3 q33.3 Transcription factor Seq+ 89226 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMC5-GPRC5B TMC5 chr16 19497163 + GPRC5B chr16 19871950 - Exonic hg38 ESCA TCGA-L5-A8NU-01A 26 2 Out-of-frame Intra-chr p12.3 p12.3 Seq+ 89227 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2K4-DNAH9 MAP2K4 chr17 12021001 + DNAH9 chr17 11923814 + Exonic hg38 ESCA TCGA-L5-A8NV-01A 15 1 In-Frame Intra-chr p12 STE:STE7 Oncogene Tumor suppressor gene p12 Seq+ 89228 ChimerSeq TCGA FAWG TCGA_RNA-Seq ORC2-RPLP2 ORC2 chr2 200925836 - RPLP2 chr11 809992 + Exonic hg38 ESCA TCGA-L5-A8NW-01A 21 0 3'UTR-3'UTR Inter-chr q33.1 p15.5 Seq+ 89229 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK8-ATP8A2 CDK8 chr13 26353880 + ATP8A2 chr13 25828118 + Exonic hg38 ESCA TCGA-L5-A8NW-01A 11 4 In-Frame Intra-chr q12.13 CMGC:CDK Oncogene q12.13 Seq+ 89230 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHMP3-CD8A CHMP3 chr2 86529218 - CD8A chr2 86801657 - Exonic hg38 ESCA TCGA-L7-A6VZ-01A 42 10 CDS-5'UTR Intra-chr p11.2 p11.2 Seq+ 89231 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D12-CYP2C18 TBC1D12 chr10 94497172 + CYP2C18 chr10 94687770 + Exonic hg38 ESCA TCGA-L7-A6VZ-01A 12 2 Out-of-frame Intra-chr q23.33 q23.33 Seq+ 89232 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRFN3-FXYD7 LRFN3 chr19 35937555 + FXYD7 chr19 35148694 + Exonic hg38 ESCA TCGA-LN-A49L-01A 159 59 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 89233 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM1-SDC3 PUM1 chr1 31059204 - SDC3 chr1 30878740 - Exonic hg38 ESCA TCGA-LN-A49L-01A 109 42 In-Frame Intra-chr p35.2 p35.2 Seq+ 89234 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN12-RHBDD2 PTPN12 chr7 77537645 + RHBDD2 chr7 75881365 + Exonic hg38 ESCA TCGA-LN-A49L-01A 83 61 CDS-5'UTR Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 89235 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEDD8-NRL NEDD8 chr14 24232250 - NRL chr14 24081568 - Exonic hg38 ESCA TCGA-LN-A49L-01A 53 56 5'UTR-5'UTR Intra-chr q12 q12 Transcription factor Seq+ 89236 ChimerSeq TCGA FAWG TCGA_RNA-Seq C16orf70-DNAAF1 C16orf70 chr16 67110239 + DNAAF1 chr16 84159675 + Exonic hg38 ESCA TCGA-LN-A49L-01A 36 5 Out-of-frame Intra-chr q22.1 q24.1 Seq+ 89237 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRCC3-FAM50A BRCC3 chrX 155078703 + FAM50A chrX 154445633 + Exonic hg38 ESCA TCGA-LN-A49L-01A 29 19 Out-of-frame Intra-chr q28 q28 Seq+ 89238 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMK1D-ECHDC3 CAMK1D chr10 12349910 + ECHDC3 chr10 11747349 + Exonic hg38 ESCA TCGA-LN-A49L-01A 24 10 In-Frame Intra-chr p13 p14 Seq+ 89239 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD7-KAT6A CHD7 chr8 60679082 + KAT6A chr8 41987563 - Exonic hg38 ESCA TCGA-LN-A49L-01A 23 5 5'UTR-CDS Intra-chr q12.2 p11.21 Oncogene Seq+ 89240 ChimerSeq TCGA FAWG TCGA_RNA-Seq N4BP1-ABCC12 N4BP1 chr16 48560754 - ABCC12 chr16 48133835 - Exonic hg38 ESCA TCGA-LN-A49L-01A 21 10 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 89241 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT11-ABCB8 GALNT11 chr7 152121904 + ABCB8 chr7 151033605 + Exonic hg38 ESCA TCGA-LN-A49L-01A 9 7 3'UTR-CDS Intra-chr q36.1 q36.1 Seq+ 89242 ChimerSeq TCGA FAWG TCGA_RNA-Seq NLN-CTNNA1 NLN chr5 65785830 + CTNNA1 chr5 138930583 + Exonic hg38 ESCA TCGA-LN-A49M-01A 75 29 Out-of-frame Intra-chr q12.3 q31.2 Oncogene Seq+ 89243 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFF4-SPATA21 AFF4 chr5 132963259 - SPATA21 chr1 16431422 - Exonic hg38 ESCA TCGA-LN-A49M-01A 7 8 5'UTR-5'UTR Inter-chr q31.1 p36.13 Seq+ 89244 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBA1C-IGFBP4 TUBA1C chr12 49269976 + IGFBP4 chr17 40452985 + Exonic hg38 ESCA TCGA-LN-A49O-01A 43 9 Out-of-frame Inter-chr q13.12 q21.2 Tumor suppressor gene Seq+ 89245 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC24A3-RIN2 SLC24A3 chr20 19281087 + RIN2 chr20 19990006 + Exonic hg38 ESCA TCGA-LN-A49O-01A 30 4 In-Frame Intra-chr p11.23 p11.23 Seq+ 89246 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASP8-STRADB CASP8 chr2 201234112 + STRADB chr2 201469953 + Exonic hg38 ESCA TCGA-LN-A49O-01A 10 7 5'UTR-CDS Intra-chr q33.1 Oncogene Tumor suppressor gene q33.1 Seq+ 89247 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF16B-CCDC178 KIF16B chr20 16371665 - CCDC178 chr18 32974681 - Exonic hg38 ESCA TCGA-LN-A49P-01A 12 3 In-Frame Inter-chr p12.1 q12.1 Seq+ 89248 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNBP-UNC93B6 CNBP chr3 129183776 - UNC93B6 chr11 71605349 + Exonic hg38 ESCA TCGA-LN-A49R-01A 39 3 Out-of-frame Inter-chr q21.3 q13.4 Seq+ 89249 ChimerSeq TCGA FAWG TCGA_RNA-Seq THA1P-TP63 THA1P chr17 78250604 - TP63 chr3 189886394 + Exonic hg38 ESCA TCGA-LN-A49R-01A 20 0 Out-of-frame Inter-chr q25.3 q28 Tumor suppressor gene Transcription factor Seq+ 89250 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF217-NKAIN2 RNF217 chr6 124963426 + NKAIN2 chr6 124791339 + Exonic hg38 ESCA TCGA-LN-A49R-01A 15 2 In-Frame Intra-chr q22.31 q22.31 Seq+ 89251 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN12-GSAP PTPN12 chr7 77592256 + GSAP chr7 77406105 - Exonic hg38 ESCA TCGA-LN-A49U-01A 10 7 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 89252 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H3-LY6H ZC3H3 chr8 143465717 - LY6H chr8 143159709 - Exonic hg38 ESCA TCGA-LN-A49V-01A 43 3 5'UTR-5'UTR Intra-chr Seq+ 89253 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPH6-AQR DPH6 chr15 35538274 - AQR chr15 34857106 - Exonic hg38 ESCA TCGA-LN-A49V-01A 41 2 In-Frame Intra-chr q14 q14 Seq+ 89254 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABI2-PPP1R1C ABI2 chr2 203328631 + PPP1R1C chr2 182061442 + Exonic hg38 ESCA TCGA-LN-A49V-01A 36 3 Out-of-frame Intra-chr q33.2 Tumor suppressor gene q31.3 Seq+ 89255 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL48-PLEKHB1 MRPL48 chr11 73808350 + PLEKHB1 chr11 73649012 + Exonic hg38 ESCA TCGA-LN-A49V-01A 28 3 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 89256 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3GLB2-WDR34 SH3GLB2 chr9 129009106 - WDR34 chr9 128640939 - Exonic hg38 ESCA TCGA-LN-A49V-01A 12 3 In-Frame Intra-chr q34.11 q34.11 Seq+ 89257 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLPB-GOLGA8B CLPB chr11 72358880 - GOLGA8B chr15 34553956 - Exonic hg38 ESCA TCGA-LN-A49W-01A 26 5 CDS-3'UTR Inter-chr q13.4 q14 Seq+ 89258 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDK1-NUPR2 SDK1 chr7 3642105 + NUPR2 chr7 56114897 - Exonic hg38 ESCA TCGA-LN-A49W-01A 25 2 CDS-3'UTR Intra-chr p22.2 p11.2 89259 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLTM-ADGRL1 SLTM chr15 58932356 - ADGRL1 chr19 14177744 - Exonic hg38 ESCA TCGA-LN-A49W-01A 19 1 In-Frame Inter-chr q22.1 p13.12 89260 ChimerSeq TCGA FAWG TCGA_RNA-Seq C16orf59-CCNF C16orf59 chr16 2462479 + CCNF chr16 2458161 + Exonic hg38 ESCA TCGA-LN-A49X-01A 12 9 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 89261 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR4300HG-NRXN2 MIR4300HG chr11 82356512 - NRXN2 chr11 64668604 - Exonic hg38 ESCA TCGA-LN-A49X-01A 6 7 3'UTR-CDS Intra-chr q14.1 q13.1 89262 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPEB4-SHISA5 CPEB4 chr5 173910604 + SHISA5 chr3 48479257 - Exonic hg38 ESCA TCGA-LN-A4A1-01A 15 2 Out-of-frame Inter-chr q35.2 p21.31 Seq+ 89263 ChimerSeq TCGA FAWG TCGA_RNA-Seq BEND3-SNX3 BEND3 chr6 107115090 - SNX3 chr6 108223045 - Exonic hg38 ESCA TCGA-LN-A4A2-01A 12 5 5'UTR-CDS Intra-chr q21 q21 Seq+ 89264 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMKK2-KDM2B CAMKK2 chr12 121268638 - KDM2B chr12 121453344 - Exonic hg38 ESCA TCGA-LN-A4A2-01A 5 0 Out-of-frame Intra-chr q24.31 q24.31 Transcription factor Seq+ 89265 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF699-PCAT19 ZNF699 chr19 9296687 - PCAT19 chr19 41456084 - Exonic hg38 ESCA TCGA-LN-A4A3-01A 144 45 Out-of-frame Intra-chr p13.2 Transcription factor 89266 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTPBP10-VPS50 GTPBP10 chr7 90355230 + VPS50 chr7 93239866 + Exonic hg38 ESCA TCGA-LN-A4A3-01A 12 1 Out-of-frame Intra-chr q21.13 q21.2 89267 ChimerSeq TCGA FAWG TCGA_RNA-Seq ME1-UBE3D ME1 chr6 83315310 - UBE3D chr6 82957450 - Exonic hg38 ESCA TCGA-LN-A4A9-01A 5 6 In-Frame Intra-chr q14.2 q14.1 Seq+ 89268 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALG12-IL17REL ALG12 chr22 49909894 - IL17REL chr22 50008664 - Exonic hg38 ESCA TCGA-LN-A4MQ-01A 14 7 CDS-5'UTR Intra-chr q13.33 q13.33 Seq+ 89269 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT2-RHOH SEPT2 chr2 241337790 + RHOH chr4 40242714 + Exonic hg38 ESCA TCGA-LN-A4MQ-01A 7 5 Out-of-frame Inter-chr q37.3 p14 Oncogene Seq+ 89270 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOMO3-ABCC1 NOMO3 chr16 16270828 + ABCC1 chr16 16044450 + Exonic hg38 ESCA TCGA-LN-A4MQ-01A 6 5 3'UTR-3'UTR Intra-chr p13.11 89271 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2S1-GPHN EIF2S1 chr14 67360456 + GPHN chr14 67110140 + Exonic hg38 ESCA TCGA-LN-A5U5-01A 109 158 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 89272 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806934 + TACC3 chr4 1739702 + Exonic hg38 ESCA TCGA-LN-A5U5-01A 16 8 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 89273 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA6-MYEOV ITGA6 chr2 172427970 + MYEOV chr11 69341510 + Exonic hg38 ESCA TCGA-LN-A5U6-01A 42 23 CDS-3'UTR Inter-chr q31.1 q13.3 Seq+ 89274 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNE2-GEMIN2 SYNE2 chr14 63853143 + GEMIN2 chr14 39114829 + Exonic hg38 ESCA TCGA-LN-A5U6-01A 18 13 5'UTR-CDS Intra-chr q23.2 q21.1 Seq+ 89275 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDHA-PLEKHG4B SDHA chr5 233645 + PLEKHG4B chr5 139483 + Exonic hg38 ESCA TCGA-LN-A5U6-01A 18 6 Out-of-frame Intra-chr p15.33 Oncogene Tumor suppressor gene p15.33 89276 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLGB1-IQCB1 GOLGB1 chr3 121749632 - IQCB1 chr3 121772713 - Exonic hg38 ESCA TCGA-LN-A5U7-01A 40 36 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 89277 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIST1H2AE-CLVS2 HIST1H2AE chr6 26217053 + CLVS2 chr6 122997312 + Exonic hg38 ESCA TCGA-LN-A5U7-01A 37 23 Out-of-frame Intra-chr p22.2 q22.31 Seq+ 89278 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSH2-EPCAM MSH2 chr2 47416429 + EPCAM chr2 47368928 + Exonic hg38 ESCA TCGA-LN-A5U7-01A 17 2 CDS-5'UTR Intra-chr p21 Oncogene Tumor suppressor gene p21 Seq+ 89279 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFP3-PCCB ZFP3 chr17 5078575 + PCCB chr3 136255856 + Exonic hg38 ESCA TCGA-LN-A5U7-01A 3 13 5'UTR-CDS Inter-chr p13.2 Transcription factor q22.3 Seq+ 89280 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLMP-C1orf61 GLMP chr1 156294018 - C1orf61 chr1 156404601 - Exonic hg38 ESCA TCGA-LN-A7HV-01A 89 68 In-Frame Intra-chr q22 Transcription factor q22 89281 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST3GAL3-PTPRF ST3GAL3 chr1 43814933 + PTPRF chr1 43603416 + Exonic hg38 ESCA TCGA-LN-A7HV-01A 29 12 Out-of-frame Intra-chr p34.1 p34.2 Seq+ 89282 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDRG1-C9 NDRG1 chr8 133280234 - C9 chr5 39342198 - Exonic hg38 ESCA TCGA-LN-A7HV-01A 24 18 Out-of-frame Inter-chr q24.22 Tumor suppressor gene p13.1 Seq+ 89283 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB9A-EGFL6 RAB9A chrX 13703902 + EGFL6 chrX 13617730 + Exonic hg38 ESCA TCGA-LN-A7HV-01A 14 7 5'UTR-CDS Intra-chr p22.2 p22.2 Seq+ 89284 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKNOX1-NDUFV3 PKNOX1 chr21 43024947 + NDUFV3 chr21 42908864 + Exonic hg38 ESCA TCGA-LN-A7HV-01A 8 3 Out-of-frame Intra-chr q22.3 Tumor suppressor gene Transcription factor q22.3 Seq+ 89285 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDZD2-KCNB2 PDZD2 chr5 32053883 + KCNB2 chr8 72935935 + Exonic hg38 ESCA TCGA-LN-A7HV-01A 5 6 Out-of-frame Inter-chr p13.3 q21.11 Seq+ 89286 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP7B-KLF5 ATP7B chr13 52011287 - KLF5 chr13 73061861 + Exonic hg38 ESCA TCGA-LN-A7HX-01A 39 12 In-Frame Intra-chr q14.3 q22.1 Tumor suppressor gene Transcription factor Seq+ 89287 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF3B-LYPD8 EIF3B chr7 2364529 + LYPD8 chr1 248751130 - Exonic hg38 ESCA TCGA-LN-A7HY-01A 30 45 CDS-5'UTR Inter-chr p22.3 q44 89288 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEF2K-MFSD13B EEF2K chr16 22225975 + MFSD13B chr16 22402692 + Exonic hg38 ESCA TCGA-LN-A7HY-01A 20 9 5'UTR-5'UTR Intra-chr p12.2 89289 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK1-PI4KAP2 MAPK1 chr22 21867322 - PI4KAP2 chr22 21473405 - Exonic hg38 ESCA TCGA-LN-A7HY-01A 13 6 CDS-3'UTR Intra-chr q11.22 Oncogene q11.21 89290 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWP2-GSG1L WWP2 chr16 69799295 + GSG1L chr16 27845061 - Exonic hg38 ESCA TCGA-LN-A8HZ-01A 19 7 In-Frame Intra-chr q22.1 p12.1 Seq+ 89291 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDIPT-SEZ6L2 CDIPT chr16 29860581 - SEZ6L2 chr16 29873729 - Exonic hg38 ESCA TCGA-LN-A8I0-01A 16 5 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 89292 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK13-POU6F2 CDK13 chr7 40002031 + POU6F2 chr7 39433077 + Exonic hg38 ESCA TCGA-LN-A8I0-01A 1 1 Out-of-frame Intra-chr p14.1 p14.1 Tumor suppressor gene Transcription factor Seq+ 89293 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1XR1-DCUN1D1 TBL1XR1 chr3 177197121 - DCUN1D1 chr3 182965753 - Exonic hg38 ESCA TCGA-LN-A8I1-01A 44 17 5'UTR-5'UTR Intra-chr q26.32 q26.33 Oncogene Seq+ 89294 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1XR1-MCF2L2 TBL1XR1 chr3 177197121 - MCF2L2 chr3 183389779 - Exonic hg38 ESCA TCGA-LN-A8I1-01A 28 11 5'UTR-CDS Intra-chr q26.32 q27.1 Seq+ 89295 ChimerSeq TCGA FAWG TCGA_RNA-Seq JPX-GAGE10 JPX chrX 73944662 + GAGE10 chrX 49304852 + Exonic hg38 ESCA TCGA-LN-A8I1-01A 11 0 5'UTR-5'UTR Intra-chr q13.2 p11.23 89296 ChimerSeq TCGA FAWG TCGA_RNA-Seq JPX_2-GAGE10 JPX_2 chrX 73944662 + GAGE10 chrX 49304852 + Exonic hg38 ESCA TCGA-LN-A8I1-01A 11 0 Out-of-frame Intra-chr q13.2 p11.23 89297 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTBN2-PC SPTBN2 chr11 66721084 - PC chr11 66872159 - Exonic hg38 ESCA TCGA-LN-A8I1-01A 10 3 CDS-5'UTR Intra-chr q13.2 q13.2 Seq+ 89298 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806934 + TACC3 chr4 1735731 + Exonic hg38 ESCA TCGA-LN-A9FO-01A 444 81 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 89299 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGHMBP2-CPT1A IGHMBP2 chr11 68917883 + CPT1A chr11 68815487 - Exonic hg38 ESCA TCGA-LN-A9FO-01A 22 2 CDS-5'UTR Intra-chr q13.3 q13.3 Seq+ 89300 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXN-GNB1 TXN chr9 110244778 - GNB1 chr1 1789269 - Exonic hg38 ESCA TCGA-LN-A9FR-01A 46 11 In-Frame Inter-chr q31.3 p36.33 Seq+ 89301 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNB1-TXN GNB1 chr1 1790395 - TXN chr9 110250864 - Exonic hg38 ESCA TCGA-LN-A9FR-01A 44 9 In-Frame Inter-chr p36.33 q31.3 Seq+ 89302 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD3-RAB5C STARD3 chr17 39653750 + RAB5C chr17 42130590 - Exonic hg38 ESCA TCGA-M9-A5M8-01A 57 20 Out-of-frame Intra-chr q12 q21.2 Seq+ 89303 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM135A-LAMA2 FAM135A chr6 70452571 + LAMA2 chr6 129049918 + Exonic hg38 ESCA TCGA-M9-A5M8-01A 16 11 In-Frame Intra-chr q13 q22.33 Seq+ 89304 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPIDR-POMGNT2 SPIDR chr8 47291137 + POMGNT2 chr3 43081536 - Exonic hg38 ESCA TCGA-Q9-A6FU-01A 91 14 5'UTR-5'UTR Inter-chr q11.21 p22.1 Seq+ 89305 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEX3D-TCF3 MEX3D chr19 1567464 - TCF3 chr19 1646427 - Exonic hg38 ESCA TCGA-Q9-A6FU-01A 27 6 Out-of-frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Transcription factor Seq+ 89306 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAB1-PPP2R2C GAB1 chr4 143440382 + PPP2R2C chr4 6348010 - Exonic hg38 ESCA TCGA-Q9-A6FU-01A 23 7 In-Frame Intra-chr q31.21 p16.1 Tumor suppressor gene Seq+ 89307 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP37-TMBIM1 USP37 chr2 218474630 - TMBIM1 chr2 218282181 - Exonic hg38 ESCA TCGA-Q9-A6FU-01A 15 2 CDS-5'UTR Intra-chr q35 q35 Seq+ 89308 ChimerSeq TCGA FAWG TCGA_RNA-Seq DMBT1-ARMS2 DMBT1 chr10 122621380 + ARMS2 chr10 122456907 + Exonic hg38 ESCA TCGA-Q9-A6FW-01A 88 45 Out-of-frame Intra-chr q26.13 Tumor suppressor gene q26.13 Seq+ 89309 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEF2A-PLPPR1 MEF2A chr15 99566104 + PLPPR1 chr9 101185450 + Exonic hg38 ESCA TCGA-Q9-A6FW-01A 5 8 5'UTR-3'UTR Inter-chr q26.3 Transcription factor q31.1 89310 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHF-BDNF EHF chr11 34651606 + BDNF chr11 27658585 - Exonic hg38 ESCA TCGA-R6-A6DN-01B 9 6 Out-of-frame Intra-chr p13 Tumor suppressor gene Transcription factor p14.1 Seq+ 89311 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTBP2-TLX1NB CTBP2 chr10 125160319 - TLX1NB chr10 101127098 - Exonic hg38 ESCA TCGA-R6-A6KZ-01A 23 9 3'UTR-3'UTR Intra-chr q26.13 q24.31 Seq+ 89312 ChimerSeq TCGA FAWG TCGA_RNA-Seq APLP2-OPCML APLP2 chr11 130070082 + OPCML chr11 132437359 - Exonic hg38 ESCA TCGA-R6-A6KZ-01A 10 5 Out-of-frame Intra-chr q24.3 q25 Tumor suppressor gene Seq+ 89313 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-FARP1 PVT1 chr8 127794734 + FARP1 chr13 98424572 + Exonic hg38 ESCA TCGA-R6-A6L6-01B 11 8 5'UTR-CDS Inter-chr q24.21 q32.2 89314 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF22-PRKCB KIF22 chr16 29790829 + PRKCB chr16 24032136 + Exonic hg38 ESCA TCGA-R6-A6XG-01B 32 48 Out-of-frame Intra-chr p11.2 p12.2 Tumor suppressor gene Seq+ 89315 ChimerSeq TCGA FAWG TCGA_RNA-Seq YAP1-USP2 YAP1 chr11 102114394 + USP2 chr11 119360234 - Exonic hg38 ESCA TCGA-R6-A6XQ-01B 8 3 Out-of-frame Intra-chr q22.1 Tumor suppressor gene q23.3 Seq+ 89316 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTAN1-C9orf16 SPTAN1 chr9 128615726 + C9orf16 chr9 128161847 + Exonic hg38 ESCA TCGA-R6-A6Y0-01B 52 49 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 89317 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF24-SNRPD3 RNF24 chr20 4015437 - SNRPD3 chr22 24567984 + Exonic hg38 ESCA TCGA-R6-A6Y0-01B 12 54 5'UTR-CDS Inter-chr p13 q11.23 Seq+ 89318 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGAPB-CTNNBL1 RALGAPB chr20 38541192 + CTNNBL1 chr20 37859899 + Exonic hg38 ESCA TCGA-R6-A6Y0-01B 22 5 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 89319 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM184B-BAIAP2L2 TMEM184B chr22 38272884 - BAIAP2L2 chr22 38087264 - Exonic hg38 ESCA TCGA-R6-A6Y0-01B 14 17 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 89320 ChimerSeq TCGA FAWG TCGA_RNA-Seq TET2-ARHGEF38 TET2 chr4 105146979 + ARHGEF38 chr4 105705314 + Exonic hg38 ESCA TCGA-R6-A6Y0-01B 10 20 5'UTR-3'UTR Intra-chr q24 Oncogene Tumor suppressor gene Transcription factor q24 Seq+ 89321 ChimerSeq TCGA FAWG TCGA_RNA-Seq TET3-ACTG2 TET3 chr2 74003166 + ACTG2 chr2 73913485 + Exonic hg38 ESCA TCGA-R6-A6Y0-01B 12 9 Out-of-frame Intra-chr p13.1 Transcription factor p13.1 Seq+ 89322 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPIN2-DLGAP1 LPIN2 chr18 3013087 - DLGAP1 chr18 3582248 - Exonic hg38 ESCA TCGA-R6-A6Y0-01B 12 3 5'UTR-CDS Intra-chr p11.31 p11.31 Seq+ 89323 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPRED2-RAB1A SPRED2 chr2 65431962 - RAB1A chr2 65104806 - Exonic hg38 ESCA TCGA-R6-A6Y0-01B 10 6 In-Frame Intra-chr p14 p14 Seq+ 89324 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCA-CACNG5 PRKCA chr17 66306127 + CACNG5 chr17 66877230 + Exonic hg38 ESCA TCGA-R6-A6Y0-01B 10 3 CDS-5'UTR Intra-chr q24.2 q24.2 Seq+ 89325 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAFK-KCTD5 MAFK chr7 1530898 + KCTD5 chr16 2702353 + Exonic hg38 ESCA TCGA-R6-A6Y0-01B 7 9 5'UTR-CDS Inter-chr p22.3 Transcription factor p13.3 Seq+ 89326 ChimerSeq TCGA FAWG TCGA_RNA-Seq NR2C2-PARL NR2C2 chr3 14947906 + PARL chr3 183868060 - Exonic hg38 ESCA TCGA-R6-A6Y2-01B 125 51 5'UTR-CDS Intra-chr p25.1 Tumor suppressor gene Transcription factor q27.1 Seq+ 89327 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHM2-IGF2BP2 PLEKHM2 chr1 15719920 + IGF2BP2 chr3 185692762 - Exonic hg38 ESCA TCGA-R6-A6Y2-01B 60 19 In-Frame Inter-chr p36.21 q27.2 Seq+ 89328 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF15-ZNHIT3 TAF15 chr17 35809576 + ZNHIT3 chr17 36492813 + Exonic hg38 ESCA TCGA-R6-A6Y2-01B 43 36 3'UTR-3'UTR Intra-chr q12 q12 Seq+ 89329 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRD9-STARD3 BRD9 chr5 876101 - STARD3 chr17 39657008 + Exonic hg38 ESCA TCGA-R6-A8W5-01B 1155 338 In-Frame Inter-chr p15.33 q12 Seq+ 89330 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGRN-ZC3H18 AGRN chr1 1045523 + ZC3H18 chr16 88598178 + Exonic hg38 ESCA TCGA-R6-A8W5-01B 229 47 In-Frame Inter-chr p36.33 q24.2 Seq+ 89331 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBP-GIF OSBP chr11 59593604 - GIF chr11 59829545 - Exonic hg38 ESCA TCGA-R6-A8W5-01B 182 29 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 89332 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF13B-C20orf194 KIF13B chr8 29155726 - C20orf194 chr20 3281766 - Exonic hg38 ESCA TCGA-R6-A8W5-01B 108 21 In-Frame Inter-chr p12 p13 Seq+ 89333 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-IKZF3 ERBB2 chr17 39693325 + IKZF3 chr17 39757965 - Exonic hg38 ESCA TCGA-R6-A8W5-01B 95 32 5'UTR-3'UTR Intra-chr q12 Oncogene q21.1 Tumor suppressor gene Transcription factor Seq+ 89334 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV4-LSM12 ETV4 chr17 43532674 - LSM12 chr17 44063934 - Exonic hg38 ESCA TCGA-R6-A8W5-01B 67 3 In-Frame Intra-chr q21.31 Oncogene Transcription factor q21.31 Seq+ 89335 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNAPIN-FMNL1 SNAPIN chr1 153659566 + FMNL1 chr17 45240476 + Exonic hg38 ESCA TCGA-R6-A8W5-01B 64 11 In-Frame Inter-chr q21.3 q21.31 Seq+ 89336 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPN3-AGPAT3 EPN3 chr17 50539315 + AGPAT3 chr21 43959634 + Exonic hg38 ESCA TCGA-R6-A8W5-01B 59 18 CDS-5'UTR Inter-chr q21.33 q22.3 Seq+ 89337 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPO5-VARS XPO5 chr6 43525107 - VARS chr6 31779814 - Exonic hg38 ESCA TCGA-R6-A8W5-01B 55 20 CDS-5'UTR Intra-chr p21.1 Tumor suppressor gene Seq+ 89338 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR59-KARS WDR59 chr16 74948519 - KARS chr16 75636547 - Exonic hg38 ESCA TCGA-R6-A8W5-01B 34 42 In-Frame Intra-chr q23.1 q23.1 Seq+ 89339 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-SLCO2B1 UVRAG chr11 75852000 + SLCO2B1 chr11 75162655 + Exonic hg38 ESCA TCGA-R6-A8W5-01B 28 18 In-Frame Intra-chr q13.5 Tumor suppressor gene q13.4 Seq+ 89340 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAG3L5P-ZKSCAN1 STAG3L5P chr7 100338264 + ZKSCAN1 chr7 100030249 + Exonic hg38 ESCA TCGA-R6-A8W5-01B 24 3 5'UTR-5'UTR Intra-chr q22.1 q22.1 Transcription factor 89341 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD28-COLQ ANKRD28 chr3 15859377 - COLQ chr3 15489637 - Exonic hg38 ESCA TCGA-R6-A8W5-01B 21 2 Out-of-frame Intra-chr p25.1 p25.1 Seq+ 89342 ChimerSeq TCGA FAWG TCGA_RNA-Seq DVL3-RFX6 DVL3 chr3 184155796 + RFX6 chr6 116931331 + Exonic hg38 ESCA TCGA-R6-A8W5-01B 21 2 Out-of-frame Inter-chr q27.1 q22.1 Transcription factor Seq+ 89343 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFFO2-UBR4 IFFO2 chr1 18916903 - UBR4 chr1 19201815 - Exonic hg38 ESCA TCGA-R6-A8W5-01B 20 5 In-Frame Intra-chr p36.13 p36.13 Seq+ 89344 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC7A7-ACIN1 SLC7A7 chr14 22812900 - ACIN1 chr14 23064488 - Exonic hg38 ESCA TCGA-R6-A8W5-01B 18 9 In-Frame Intra-chr q11.2 q11.2 Seq+ 89345 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF2-WNK2 PHF2 chr9 93576871 + WNK2 chr9 93238233 + Exonic hg38 ESCA TCGA-R6-A8W5-01B 18 5 Out-of-frame Intra-chr q22.31 q22.31 Tumor suppressor gene Seq+ 89346 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPOP-TSPEAR SPOP chr17 49677933 - TSPEAR chr21 44533923 - Exonic hg38 ESCA TCGA-R6-A8W5-01B 16 3 5'UTR-CDS Inter-chr q21.33 Oncogene Tumor suppressor gene q22.3 Seq+ 89347 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH2L-CENPU ASH2L chr8 38121149 + CENPU chr4 184725062 - Exonic hg38 ESCA TCGA-R6-A8W5-01B 12 2 In-Frame Inter-chr p11.23 q35.1 89348 ChimerSeq TCGA FAWG TCGA_RNA-Seq TKT-CENPF TKT chr3 53240251 - CENPF chr1 214658871 + Exonic hg38 ESCA TCGA-R6-A8W8-01B 75 15 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q41 Seq+ 89349 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAPD7-SRD5A1 PAPD7 chr5 6714699 + SRD5A1 chr5 6662816 + Exonic hg38 ESCA TCGA-R6-A8W8-01B 31 7 Out-of-frame Intra-chr p15.31 p15.31 Seq+ 89350 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASP7-UQCRB CASP7 chr10 113730687 + UQCRB chr8 96235537 - Exonic hg38 ESCA TCGA-R6-A8W8-01B 18 11 Out-of-frame Inter-chr q25.3 q22.1 Seq+ 89351 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF318-FOXP4 ZNF318 chr6 43348324 - FOXP4 chr6 41565745 + Exonic hg38 ESCA TCGA-R6-A8W8-01B 12 3 CDS-5'UTR Intra-chr p21.1 Transcription factor p21.1 Oncogene Transcription factor Seq+ 89352 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP2B1-GAS2L2 AP2B1 chr17 35657791 + GAS2L2 chr17 35750318 - Exonic hg38 ESCA TCGA-R6-A8W8-01B 11 4 Out-of-frame Intra-chr q12 q12 Seq+ 89353 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP192-PIGU CEP192 chr18 13001582 + PIGU chr20 34588607 - Exonic hg38 ESCA TCGA-R6-A8WG-01A 18 6 Out-of-frame Inter-chr p11.21 q11.22 Seq+ 89354 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF123-CHMP2B RNF123 chr3 49714174 + CHMP2B chr3 87245714 + Exonic hg38 ESCA TCGA-R6-A8WG-01A 8 7 Out-of-frame Intra-chr p21.31 p11.2 Seq+ 89355 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKS3-SEPT12 ANKS3 chr16 4724750 - SEPT12 chr16 4779786 - Exonic hg38 ESCA TCGA-S8-A6BW-01A 19 4 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 89356 ChimerSeq TCGA FAWG TCGA_RNA-Seq UCHL3-KLF5 UCHL3 chr13 75560881 + KLF5 chr13 73062109 + Exonic hg38 ESCA TCGA-V5-A7RB-01A 74 15 In-Frame Intra-chr q22.2 q22.1 Tumor suppressor gene Transcription factor Seq+ 89357 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICALL2-CA3 MICALL2 chr7 1442192 - CA3 chr8 85442073 + Exonic hg38 ESCA TCGA-V5-A7RB-01A 65 19 In-Frame Inter-chr p22.3 q21.2 Seq+ 89358 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFE2L3-NPY NFE2L3 chr7 26153068 + NPY chr7 24285241 + Exonic hg38 ESCA TCGA-V5-A7RB-01A 43 5 CDS-5'UTR Intra-chr p15.2 Transcription factor p15.3 Seq+ 89359 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACAA2-MYO5B ACAA2 chr18 49783879 - MYO5B chr18 49826623 - Exonic hg38 ESCA TCGA-V5-A7RB-01A 32 11 In-Frame Intra-chr q21.1 q21.1 Seq+ 89360 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRFIP1-RAMP1 LRRFIP1 chr2 237760205 + RAMP1 chr2 237877224 + Exonic hg38 ESCA TCGA-V5-A7RB-01A 20 11 In-Frame Intra-chr q37.3 q37.3 Seq+ 89361 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGZ-MELTF PIGZ chr3 196968687 - MELTF chr3 197009812 - Exonic hg38 ESCA TCGA-V5-A7RB-01A 16 5 5'UTR-CDS Intra-chr q29 q29 89362 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFA13-AZIN1 NDUFA13 chr19 19516332 + AZIN1 chr8 102839823 - Exonic hg38 ESCA TCGA-V5-A7RB-01A 12 4 Out-of-frame Inter-chr p13.11 q22.3 Seq+ 89363 ChimerSeq TCGA FAWG TCGA_RNA-Seq AZIN1-NDUFA13 AZIN1 chr8 102836256 - NDUFA13 chr19 19526182 + Exonic hg38 ESCA TCGA-V5-A7RB-01A 12 3 Out-of-frame Inter-chr q22.3 p13.11 Seq+ 89364 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASAP1-FGF12 ASAP1 chr8 130358017 - FGF12 chr3 192360538 - Exonic hg38 ESCA TCGA-V5-A7RB-01A 9 4 Out-of-frame Inter-chr q24.22 q29 Seq+ 89365 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDOA-BCAR4 ALDOA chr16 30065927 + BCAR4 chr16 11820297 - Exonic hg38 ESCA TCGA-V5-A7RE-01A 139 243 5'UTR-3'UTR Intra-chr p11.2 p13.13 Seq+ 89366 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13-MYO15B MED13 chr17 62063067 - MYO15B chr17 75610166 + Exonic hg38 ESCA TCGA-V5-A7RE-01A 103 76 Out-of-frame Intra-chr q23.2 q25.1 Seq+ 89367 ChimerSeq TCGA FAWG TCGA_RNA-Seq MMD-HDAC5 MMD chr17 55421670 - HDAC5 chr17 44088598 - Exonic hg38 ESCA TCGA-V5-A7RE-01A 60 38 Out-of-frame Intra-chr q22 q21.31 Seq+ 89368 ChimerSeq TCGA FAWG TCGA_RNA-Seq LLGL2-FAM222B LLGL2 chr17 75559410 + FAM222B chr17 28766707 - Exonic hg38 ESCA TCGA-V5-A7RE-01A 33 23 CDS-5'UTR Intra-chr q25.1 q11.2 Seq+ 89369 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC27-CCT6B CDC27 chr17 47189146 - CCT6B chr17 34954599 - Exonic hg38 ESCA TCGA-V5-A7RE-01A 23 26 In-Frame Intra-chr q21.32 q12 Seq+ 89370 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K3-DBF4B MAP3K3 chr17 63652656 + DBF4B chr17 44747083 + Exonic hg38 ESCA TCGA-V5-A7RE-01A 26 12 Out-of-frame Intra-chr q23.3 STE:STE11 q21.31 Seq+ 89371 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCD2-STRADA SMARCD2 chr17 63833587 - STRADA chr17 63707418 - Exonic hg38 ESCA TCGA-V5-A7RE-01A 17 30 Out-of-frame Intra-chr q23.3 q23.3 Tumor suppressor gene Seq+ 89372 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAG9-TRIM37 SPAG9 chr17 50979746 - TRIM37 chr17 59091340 - Exonic hg38 ESCA TCGA-V5-A7RE-01A 17 21 Out-of-frame Intra-chr q21.33 q22 Seq+ 89373 ChimerSeq TCGA FAWG TCGA_RNA-Seq STRADA-GRB2 STRADA chr17 63713406 - GRB2 chr17 75332797 - Exonic hg38 ESCA TCGA-V5-A7RE-01A 20 8 In-Frame Intra-chr q23.3 Tumor suppressor gene q25.1 Seq+ 89374 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP32-FAM222B USP32 chr17 60345481 - FAM222B chr17 28790425 - Exonic hg38 ESCA TCGA-V5-A7RE-01A 11 34 CDS-5'UTR Intra-chr q23.2 q11.2 89375 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAPGEFL1-NFE2L1 RAPGEFL1 chr17 40177544 + NFE2L1 chr17 48056385 + Exonic hg38 ESCA TCGA-V5-A7RE-01A 14 2 Out-of-frame Intra-chr q21.1 q21.32 Transcription factor 89376 ChimerSeq TCGA FAWG TCGA_RNA-Seq CORO7-RMI2 CORO7 chr16 4416459 - RMI2 chr16 11316141 + Exonic hg38 ESCA TCGA-V5-A7RE-01A 10 14 5'UTR-5'UTR Intra-chr p13.3 p13.13 89377 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX40-GH1 DHX40 chr17 59588053 + GH1 chr17 63918506 - Exonic hg38 ESCA TCGA-V5-A7RE-01A 6 15 In-Frame Intra-chr q23.1 q23.3 89378 ChimerSeq TCGA FAWG TCGA_RNA-Seq HEATR6-THRA1/BTR HEATR6 chr17 60055515 - THRA1/BTR chr17 48294347 + Exonic hg38 ESCA TCGA-V5-A7RE-01A 6 9 CDS-5'UTR Intra-chr q23.1 q21.32 89379 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP36-DNAH17 USP36 chr17 78812860 - DNAH17 chr17 78437868 - Exonic hg38 ESCA TCGA-V5-AASV-01A 31 12 In-Frame Intra-chr q25.3 q25.3 Seq+ 89380 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTCF-HNRNPDL CTCF chr16 67571264 + HNRNPDL chr4 82429412 - Exonic hg38 ESCA TCGA-V5-AASV-01A 19 7 5'UTR-CDS Inter-chr q22.1 Tumor suppressor gene Transcription factor q21.22 Seq+ 89381 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP72-EXOC3 CEP72 chr5 647916 + EXOC3 chr5 453370 + Exonic hg38 ESCA TCGA-V5-AASW-01A 53 14 Out-of-frame Intra-chr p15.33 Seq+ 89382 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNAQ-FBP1 GNAQ chr9 78031100 - FBP1 chr9 94620491 - Exonic hg38 ESCA TCGA-V5-AASW-01A 15 2 Out-of-frame Intra-chr q21.2 Oncogene q22.32 Tumor suppressor gene Seq+ 89383 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABL1-APBA1 ABL1 chr9 130835525 + APBA1 chr9 69517279 - Exonic hg38 ESCA TCGA-V5-AASW-01A 13 2 CDS-3'UTR Intra-chr q34.12 TK:Abl Oncogene q21.12 Seq+ 89384 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM35A-SEZ6L2 FAM35A chr10 87096989 + SEZ6L2 chr16 29885749 - Exonic hg38 ESCA TCGA-V5-AASX-01A 12 8 Out-of-frame Inter-chr q23.2 p11.2 Seq+ 89385 ChimerSeq TCGA FAWG TCGA_RNA-Seq ME1-UBE3D ME1 chr6 83398367 - UBE3D chr6 82957450 - Exonic hg38 ESCA TCGA-VR-A8EO-01A 27 15 In-Frame Intra-chr q14.2 q14.1 Seq+ 89386 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGAPB-KCNB1 RALGAPB chr20 38499633 + KCNB1 chr20 49374992 - Exonic hg38 ESCA TCGA-VR-A8EQ-01A 82 21 Out-of-frame Intra-chr q11.23 q13.13 Seq+ 89387 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIMM22-SGSM2 TIMM22 chr17 997233 + SGSM2 chr17 2376097 + Exonic hg38 ESCA TCGA-VR-A8EQ-01A 15 13 Out-of-frame Intra-chr p13.3 Transcription factor Seq+ 89388 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFT80-TNIK IFT80 chr3 160399146 - TNIK chr3 171228221 - Exonic hg38 ESCA TCGA-VR-A8ER-01A 9 2 5'UTR-CDS Intra-chr q25.33 q26.31 STE:STE20 Seq+ 89389 ChimerSeq TCGA FAWG TCGA_RNA-Seq YWHAB-STK4 YWHAB chr20 44885886 + STK4 chr20 45075018 + Exonic hg38 ESCA TCGA-VR-A8ET-01A 40 5 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 89390 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBK1-RBM48 TBK1 chr12 64495775 + RBM48 chr7 92532404 + Exonic hg38 ESCA TCGA-VR-A8ET-01A 30 5 Out-of-frame Inter-chr q14.2 Other:IKK q21.2 Seq+ 89391 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTTN-TRGV5 CTTN chr11 70409960 + TRGV5 chr7 38349665 - Exonic hg38 ESCA TCGA-VR-A8EU-01A 26 17 Out-of-frame Inter-chr q13.3 p14.1 Seq+ 89392 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCA12-SGPP2 ABCA12 chr2 215025673 - SGPP2 chr2 222474568 + Exonic hg38 ESCA TCGA-VR-A8EU-01A 21 8 In-Frame Intra-chr q35 q36.1 Seq+ 89393 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1109-ADAD1 KIAA1109 chr4 122197274 + ADAD1 chr4 122380062 + Exonic hg38 ESCA TCGA-VR-A8EU-01A 18 9 CDS-5'UTR Intra-chr q27 q27 Seq+ 89394 ChimerSeq TCGA FAWG TCGA_RNA-Seq NLRP1-C1QBP NLRP1 chr17 5581859 - C1QBP chr17 5434966 - Exonic hg38 ESCA TCGA-VR-A8EU-01A 8 3 Out-of-frame Intra-chr p13.2 Oncogene p13.2 Seq+ 89395 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFHX3-PMFBP1 ZFHX3 chr16 73058530 - PMFBP1 chr16 72164916 - Exonic hg38 ESCA TCGA-VR-A8EU-01A 5 6 5'UTR-5'UTR Intra-chr q22.3 Tumor suppressor gene Transcription factor q22.2 Seq+ 89396 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF3C3-COL5A2 GTF3C3 chr2 196779035 - COL5A2 chr2 189052968 - Exonic hg38 ESCA TCGA-VR-A8EW-01A 23 6 Out-of-frame Intra-chr q33.1 q32.2 Seq+ 89397 ChimerSeq TCGA FAWG TCGA_RNA-Seq UPF3A-CDC16 UPF3A chr13 114286629 + CDC16 chr13 114261887 + Exonic hg38 ESCA TCGA-VR-A8EW-01A 13 9 Out-of-frame Intra-chr q34 q34 Seq+ 89398 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR44-DOCK11 WDR44 chrX 118410959 + DOCK11 chrX 118624539 + Exonic hg38 ESCA TCGA-VR-A8EW-01A 13 3 In-Frame Intra-chr q24 q24 Seq+ 89399 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D22A-TRMU TBC1D22A chr22 46997709 + TRMU chr22 46356842 + Exonic hg38 ESCA TCGA-VR-A8EX-01A 8 6 In-Frame Intra-chr q13.31 q13.31 Seq+ 89400 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPAS2-PACSIN2 NPAS2 chr2 100904786 + PACSIN2 chr22 42888798 - Exonic hg38 ESCA TCGA-VR-A8EY-01A 56 28 Out-of-frame Inter-chr q11.2 Tumor suppressor gene Transcription factor q13.2 Seq+ 89401 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF18B-MEIOC KIF18B chr17 44932912 - MEIOC chr17 44657127 + Exonic hg38 ESCA TCGA-VR-A8EY-01A 15 6 In-Frame Intra-chr q21.31 q21.31 89402 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEBPZOS-FAF1 CEBPZOS chr2 37196520 + FAF1 chr1 50491801 - Exonic hg38 ESCA TCGA-VR-A8EY-01A 12 2 5'UTR-CDS Inter-chr p22.2 p32.3 89403 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNC1LI2-NAE1 DYNC1LI2 chr16 66749197 - NAE1 chr16 66806026 - Exonic hg38 ESCA TCGA-VR-A8Q7-01A 472 76 In-Frame Intra-chr q22.1 q22.1 Seq+ 89404 ChimerSeq TCGA FAWG TCGA_RNA-Seq TYK2-TMEM205 TYK2 chr19 10379615 - TMEM205 chr19 11345628 - Exonic hg38 ESCA TCGA-VR-A8Q7-01A 102 34 5'UTR-5'UTR Intra-chr p13.2 TK:JakA p13.2 Seq+ 89405 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIC1-LARS RIC1 chr9 5757451 + LARS chr5 146135664 - Exonic hg38 ESCA TCGA-VR-A8Q7-01A 49 16 In-Frame Inter-chr p24.1 q32 89406 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL10-CTBP2 METTL10 chr10 124765392 - CTBP2 chr10 124989698 - Exonic hg38 ESCA TCGA-VR-A8Q7-01A 29 14 Out-of-frame Intra-chr q26.13 Seq+ 89407 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACSL3-KCNE4 ACSL3 chr2 222934687 + KCNE4 chr2 223052134 + Exonic hg38 ESCA TCGA-VR-A8Q7-01A 21 2 CDS-5'UTR Intra-chr q36.1 q36.1 Seq+ 89408 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA3F-RNF123 SEMA3F chr3 50159734 + RNF123 chr3 49704650 + Exonic hg38 ESCA TCGA-VR-A8Q7-01A 14 4 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 89409 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLE3-YWHAH TLE3 chr15 70053227 - YWHAH chr22 31956139 + Exonic hg38 ESCA TCGA-VR-A8Q7-01A 11 4 In-Frame Inter-chr q23 q12.3 Seq+ 89410 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACLY-NEUROD2 ACLY chr17 41883122 - NEUROD2 chr17 39606604 - Exonic hg38 ESCA TCGA-VR-AA4D-01A 66 105 CDS-5'UTR Intra-chr q21.2 q12 Transcription factor Seq+ 89411 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACAA2-MYO5B ACAA2 chr18 49813469 - MYO5B chr18 49853647 - Exonic hg38 ESCA TCGA-VR-AA4D-01A 12 2 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 89412 ChimerSeq TCGA FAWG TCGA_RNA-Seq PASD1-ZFX PASD1 chrX 151648702 + ZFX chrX 24207326 + Exonic hg38 ESCA TCGA-VR-AA7B-01A 25 8 Out-of-frame Intra-chr q28 p22.11 Transcription factor Seq+ 89413 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H7B-USP49 ZC3H7B chr22 41332227 + USP49 chr6 41807011 - Exonic hg38 ESCA TCGA-VR-AA7B-01A 13 8 CDS-5'UTR Inter-chr q13.2 p21.1 Seq+ 89414 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF420-DPF1 ZNF420 chr19 37091121 + DPF1 chr19 38213756 - Exonic hg38 ESCA TCGA-XP-A8T6-01A 38 31 In-Frame Intra-chr q13.12 Transcription factor q13.2 Transcription factor Seq+ 89415 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNF4G-TERF2 HNF4G chr8 75407964 + TERF2 chr16 69372355 - Exonic hg38 ESCA TCGA-XP-A8T6-01A 16 11 5'UTR-CDS Inter-chr q21.13 Transcription factor q22.1 Transcription factor Seq+ 89416 ChimerSeq TCGA FAWG TCGA_RNA-Seq DACH1-KLF12 DACH1 chr13 71865922 - KLF12 chr13 73695671 - Exonic hg38 ESCA TCGA-XP-A8T8-01A 21 22 Out-of-frame Intra-chr q21.33 Tumor suppressor gene Transcription factor q22.1 Transcription factor Seq+ 89417 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATAD2A-CHST1 GATAD2A chr19 19465614 + CHST1 chr11 45652606 - Exonic hg38 ESCA TCGA-XP-A8T8-01A 15 16 CDS-5'UTR Inter-chr p13.11 Transcription factor p11.2 Seq+ 89418 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTG3-OT1 BTG3 chr21 17604860 - OT1 chr21 17787210 - Exonic hg38 ESCA TCGA-XP-A8T8-01A 7 12 Out-of-frame Intra-chr Tumor suppressor gene 89419 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK1A1-FOXL2NB CSNK1A1 chr5 149550075 - FOXL2NB chr3 138949512 + Exonic hg38 ESCA TCGA-Z6-A8JE-01A 14 3 5'UTR-CDS Inter-chr q32 Tumor suppressor gene q22.3 89420 ChimerSeq TCGA FAWG TCGA_RNA-Seq NADSYN1-DHCR7 NADSYN1 chr11 71491903 + DHCR7 chr11 71444958 - Exonic hg38 ESCA TCGA-Z6-A9VB-01A 17 1 CDS-5'UTR Intra-chr q13.4 q13.4 Seq+ 89421 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXT1-TSNARE1 EXT1 chr8 118110085 - TSNARE1 chr8 142212313 - Exonic hg38 ESCA TCGA-Z6-AAPN-01A 24 6 CDS-3'UTR Intra-chr q24.11 Oncogene Tumor suppressor gene q24.3 Seq+ 89422 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTF1-NRG4 RTF1 chr15 41417313 + NRG4 chr15 75956011 - Exonic hg38 GBM TCGA-02-0055-01A 1 2 Out-of-frame Intra-chr q15.1 q24.2 89423 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM2-MARS R3HDM2 chr12 57430720 - MARS chr12 57504225 + Exonic hg38 GBM TCGA-02-2485-01A 67 5 5'UTR-CDS Intra-chr q13.3 q13.3 89424 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL21B-INHBE METTL21B chr12 57773128 + INHBE chr12 57456094 + Exonic hg38 GBM TCGA-02-2485-01A 8 8 Out-of-frame Intra-chr q13.3 Seq+ 89425 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM2-ATP23 R3HDM2 chr12 57266731 - ATP23 chr12 57945628 + Exonic hg38 GBM TCGA-02-2485-01A 7 6 CDS-5'UTR Intra-chr q13.3 89426 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55200413 + SEPT14 chr7 55819223 - Exonic hg38 GBM TCGA-02-2485-01A 2 0 Out-of-frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 89427 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF13-ESPN PHF13 chr1 6614105 + ESPN chr1 6428226 + Exonic hg38 GBM TCGA-02-2486-01A 4 2 In-Frame Intra-chr p36.31 p36.31 Seq+ 89428 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM234-CSMD2 TMEM234 chr1 32217259 - CSMD2 chr1 33792526 - Exonic hg38 GBM TCGA-02-2486-01A 4 1 Out-of-frame Intra-chr p35.2 p35.1 Seq+ 89429 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSMD2-IL2RA CSMD2 chr1 33846884 - IL2RA chr10 6018119 - Exonic hg38 GBM TCGA-02-2486-01A 2 0 In-Frame Inter-chr p35.1 p15.1 Seq+ 89430 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKIV2L2-IGF2R SKIV2L2 chr5 55308147 + IGF2R chr6 159991184 + Exonic hg38 GBM TCGA-02-2486-01A 2 0 Out-of-frame Inter-chr q11.2 q25.3 Oncogene Tumor suppressor gene Seq+ 89431 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1A-RNF31 ARID1A chr1 26767999 + RNF31 chr14 24155157 + Exonic hg38 GBM TCGA-06-0125-01A 50 20 CDS-3'UTR Inter-chr p36.11 Oncogene Tumor suppressor gene q12 Seq+ 89432 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A3-SGTA SLC39A3 chr19 2737048 - SGTA chr19 2765285 - Exonic hg38 GBM TCGA-06-0125-01A 30 14 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 89433 ChimerSeq TCGA FAWG TCGA_RNA-Seq FDX1-SLC35E2 FDX1 chr11 110457047 + SLC35E2 chr1 1734835 - Exonic hg38 GBM TCGA-06-0125-01A 12 2 Out-of-frame Inter-chr q22.3 p36.33 Seq+ 89434 ChimerSeq TCGA FAWG TCGA_RNA-Seq COX14-SPATS2 COX14 chr12 50112301 + SPATS2 chr12 49460770 + Exonic hg38 GBM TCGA-06-0125-01A 4 10 5'UTR-5'UTR Intra-chr q13.12 q13.12 Seq+ 89435 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK12-CDC6 CDK12 chr17 39463117 + CDC6 chr17 40289408 + Exonic hg38 GBM TCGA-06-0130-01A 10 5 CDS-3'UTR Intra-chr q12 Oncogene q21.2 Seq+ 89436 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSFM-OS9 TSFM chr12 57796385 + OS9 chr12 57715760 + Exonic hg38 GBM TCGA-06-0130-01A 5 2 Out-of-frame Intra-chr q14.1 q13.3 Seq+ 89437 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSAP-STYXL1 GSAP chr7 77376848 - STYXL1 chr7 76005404 - Exonic hg38 GBM TCGA-06-0130-01A 4 4 In-Frame Intra-chr q11.23 q11.23 89438 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRCAP-RPS4Y1 SRCAP chr16 30716479 + RPS4Y1 chrY 2854600 + Exonic hg38 GBM TCGA-06-0132-01A 37 18 CDS-3'UTR Inter-chr p11.2 Transcription factor p11.2 Seq+ 89439 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS4Y1-CDH13 RPS4Y1 chrY 2844257 + CDH13 chr16 83125385 + Exonic hg38 GBM TCGA-06-0132-01A 3 4 3'UTR-3'UTR Inter-chr p11.2 q23.3 Tumor suppressor gene Seq+ 89440 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC61G-VOPP1 SEC61G chr7 54759158 - VOPP1 chr7 55436174 - Exonic hg38 GBM TCGA-06-0132-01A 2 1 5'UTR-3'UTR Intra-chr p11.2 p11.2 89441 ChimerSeq TCGA FAWG TCGA_RNA-Seq YEATS4-ATP23 YEATS4 chr12 69370975 + ATP23 chr12 57945628 + Exonic hg38 GBM TCGA-06-0138-01A 669 542 CDS-5'UTR Intra-chr q15 89442 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC35E3-OS9 SLC35E3 chr12 68752190 + OS9 chr12 57715760 + Exonic hg38 GBM TCGA-06-0138-01A 61 59 In-Frame Intra-chr q15 q13.3 Seq+ 89443 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL21B-CPM METTL21B chr12 57773128 + CPM chr12 68932840 - Exonic hg38 GBM TCGA-06-0138-01A 15 11 Out-of-frame Intra-chr q15 Seq+ 89444 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL21B-LYZ METTL21B chr12 57773128 + LYZ chr12 69350108 + Exonic hg38 GBM TCGA-06-0138-01A 13 5 Out-of-frame Intra-chr q15 Seq+ 89445 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSFM-LYZ TSFM chr12 57793073 + LYZ chr12 69350108 + Exonic hg38 GBM TCGA-06-0138-01A 10 9 In-Frame Intra-chr q14.1 q15 Seq+ 89446 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSFM-GLI1 TSFM chr12 57787162 + GLI1 chr12 57464673 + Exonic hg38 GBM TCGA-06-0138-01A 2 1 Out-of-frame Intra-chr q14.1 q13.3 Tumor suppressor gene Transcription factor Seq+ 89447 ChimerSeq TCGA FAWG TCGA_RNA-Seq YEATS4-MARS YEATS4 chr12 69370975 + MARS chr12 57511698 + Exonic hg38 GBM TCGA-06-0138-01A 1000 1000 Out-of-frame Intra-chr q15 q13.3 Seq+ 89448 ChimerSeq TCGA FAWG TCGA_RNA-Seq GIGYF2-ECEL1 GIGYF2 chr2 232697392 + ECEL1 chr2 232481156 - Exonic hg38 GBM TCGA-06-0141-01A 84 4 5'UTR-CDS Intra-chr q37.1 q37.1 Seq+ 89449 ChimerSeq TCGA FAWG TCGA_RNA-Seq GBAP1-CABIN1 GBAP1 chr1 155216384 - CABIN1 chr22 24178361 + Exonic hg38 GBM TCGA-06-0141-01A 45 24 5'UTR-3'UTR Inter-chr q22 Seq+ 89450 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK1-RARA TAOK1 chr17 29391024 + RARA chr17 40348316 + Exonic hg38 GBM TCGA-06-0141-01A 10 4 5'UTR-CDS Intra-chr q11.2 q21.2 Oncogene Transcription factor Seq+ 89451 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTF1-SF3A3 MTF1 chr1 37857251 - SF3A3 chr1 37987836 - Exonic hg38 GBM TCGA-06-0141-01A 8 4 In-Frame Intra-chr p34.3 Transcription factor p34.3 Seq+ 89452 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPECC1L-SNUPN SPECC1L chr22 24270983 + SNUPN chr15 75626371 - Exonic hg38 GBM TCGA-06-0141-01A 6 6 5'UTR-5'UTR Inter-chr q11.23 q24.2 Seq+ 89453 ChimerSeq TCGA FAWG TCGA_RNA-Seq HBA2-PCBP4 HBA2 chr16 173632 + PCBP4 chr3 51957688 - Exonic hg38 GBM TCGA-06-0141-01A 4 3 Out-of-frame Inter-chr p13.3 p21.2 Seq+ 89454 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN9-ASH1L PTPN9 chr15 75578714 - ASH1L chr1 155354630 - Exonic hg38 GBM TCGA-06-0141-01A 3 1 Out-of-frame Inter-chr q24.2 q22 Transcription factor Seq+ 89455 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYL6B-VWA3A MYL6B chr12 56154092 + VWA3A chr16 22149787 + Exonic hg38 GBM TCGA-06-0156-01A 45 20 CDS-5'UTR Inter-chr q13.2 Seq+ 89456 ChimerSeq TCGA FAWG TCGA_RNA-Seq NBAS-C2orf82 NBAS chr2 15551493 - C2orf82 chr2 232870285 + Exonic hg38 GBM TCGA-06-0156-01A 42 23 Out-of-frame Intra-chr p24.3 q37.1 Seq+ 89457 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHID1-CORO7 CHID1 chr11 910775 - CORO7 chr16 4388631 - Exonic hg38 GBM TCGA-06-0156-01A 12 4 5'UTR-5'UTR Inter-chr p15.5 p13.3 Seq+ 89458 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIS3L2-NBAS DIS3L2 chr2 232300119 + NBAS chr2 15383317 - Exonic hg38 GBM TCGA-06-0156-01A 3 3 In-Frame Intra-chr q37.1 p24.3 Seq+ 89459 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDGFRA-SCFD2 PDGFRA chr4 54229415 + SCFD2 chr4 53274001 - Exonic hg38 GBM TCGA-06-0156-01A 1 2 5'UTR-CDS Intra-chr q12 Oncogene q12 Seq+ 89460 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIGAR-TSPAN9 TIGAR chr12 4321303 + TSPAN9 chr12 3201177 + Exonic hg38 GBM TCGA-06-0157-01A 131 33 CDS-5'UTR Intra-chr p13.32 p13.33 89461 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFASC-SOX13 NFASC chr1 204828782 + SOX13 chr1 204112915 + Exonic hg38 GBM TCGA-06-0157-01A 45 28 5'UTR-5'UTR Intra-chr q32.1 q32.1 Transcription factor Seq+ 89462 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBMS2-LITAF RBMS2 chr12 56522089 + LITAF chr16 11556735 - Exonic hg38 GBM TCGA-06-0157-01A 39 7 CDS-5'UTR Inter-chr q13.3 p13.13 Tumor suppressor gene Seq+ 89463 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAT8L-DBNDD1 NAT8L chr4 2061162 + DBNDD1 chr16 90009430 - Exonic hg38 GBM TCGA-06-0157-01A 27 15 In-Frame Inter-chr p16.3 q24.3 Seq+ 89464 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA6-DTX3 PLEKHA6 chr1 204241375 - DTX3 chr12 57604795 + Exonic hg38 GBM TCGA-06-0157-01A 19 11 CDS-5'UTR Inter-chr q32.1 q13.3 89465 ChimerSeq TCGA FAWG TCGA_RNA-Seq EML4-CASK EML4 chr2 42169636 + CASK chrX 41561644 - Exonic hg38 GBM TCGA-06-0158-01A 74 28 In-Frame Inter-chr p21 Oncogene p11.4 CAMK:CASK Seq+ 89466 ChimerSeq TCGA FAWG TCGA_RNA-Seq RCAN1-CD180 RCAN1 chr21 34521499 - CD180 chr5 67186017 - Exonic hg38 GBM TCGA-06-0158-01A 3 1 Out-of-frame Inter-chr q22.12 q12.3 Seq+ 89467 ChimerSeq TCGA FAWG TCGA_RNA-Seq OS9-C12orf66 OS9 chr12 57696373 + C12orf66 chr12 64194658 - Exonic hg38 GBM TCGA-06-0174-01A 803 595 Out-of-frame Intra-chr q13.3 q14.2 Seq+ 89468 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM2-PIP4K2C R3HDM2 chr12 57289009 - PIP4K2C chr12 57595888 + Exonic hg38 GBM TCGA-06-0174-01A 169 195 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 89469 ChimerSeq TCGA FAWG TCGA_RNA-Seq OS9-ATP23 OS9 chr12 57695843 + ATP23 chr12 57945628 + Exonic hg38 GBM TCGA-06-0174-01A 78 75 CDS-5'UTR Intra-chr q13.3 89470 ChimerSeq TCGA FAWG TCGA_RNA-Seq OS9-CPSF6 OS9 chr12 57696373 + CPSF6 chr12 69251129 + Exonic hg38 GBM TCGA-06-0174-01A 35 19 In-Frame Intra-chr q13.3 q15 Seq+ 89471 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEIS2-ZNF143 MEIS2 chr15 37036814 - ZNF143 chr11 9494646 + Exonic hg38 GBM TCGA-06-0174-01A 30 16 In-Frame Inter-chr q14 Transcription factor p15.4 Transcription factor Seq+ 89472 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF143-C15orf41 ZNF143 chr11 9479546 + C15orf41 chr15 36644278 + Exonic hg38 GBM TCGA-06-0174-01A 9 2 Out-of-frame Inter-chr p15.4 Transcription factor q14 Seq+ 89473 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOT1-ASIC2 RHOT1 chr17 32142729 + ASIC2 chr17 33112067 - Exonic hg38 GBM TCGA-06-0174-01A 3 1 Out-of-frame Intra-chr q11.2 q12 Seq+ 89474 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC61G-ELDR SEC61G chr7 54759158 - ELDR chr7 55238666 - Exonic hg38 GBM TCGA-06-0174-01A 3 0 5'UTR-3'UTR Intra-chr p11.2 89475 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPM-NUP107 CPM chr12 68932678 - NUP107 chr12 68741813 + Exonic hg38 GBM TCGA-06-0174-01A 1 2 Out-of-frame Intra-chr q15 q15 Seq+ 89476 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP2-TMEM67 AGAP2 chr12 57729639 - TMEM67 chr8 93815305 + Exonic hg38 GBM TCGA-06-0178-01A 59 81 In-Frame Inter-chr q14.1 q22.1 Seq+ 89477 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM2-SORBS2 R3HDM2 chr12 57310264 - SORBS2 chr4 185775366 - Exonic hg38 GBM TCGA-06-0178-01A 8 4 CDS-5'UTR Inter-chr q13.3 q35.1 Seq+ 89478 ChimerSeq TCGA FAWG TCGA_RNA-Seq SORBS2-OS9 SORBS2 chr4 185657424 - OS9 chr12 57715760 + Exonic hg38 GBM TCGA-06-0178-01A 5 4 In-Frame Inter-chr q35.1 q13.3 Seq+ 89479 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID2-LETMD1 ARID2 chr12 45731314 + LETMD1 chr12 51056350 + Exonic hg38 GBM TCGA-06-0178-01A 3 0 Out-of-frame Intra-chr q12 Oncogene Tumor suppressor gene Transcription factor q13.12 Seq+ 89480 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT1-NDRG4 CNOT1 chr16 58629728 - NDRG4 chr16 58487756 + Exonic hg38 GBM TCGA-06-0178-01A 2 1 5'UTR-5'UTR Intra-chr q21 q21 Tumor suppressor gene Seq+ 89481 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRRT-PPP1R17 SRRT chr7 100882241 + PPP1R17 chr7 31692406 + Exonic hg38 GBM TCGA-06-0184-01A 20 12 CDS-5'UTR Intra-chr q22.1 p14.3 Seq+ 89482 ChimerSeq TCGA FAWG TCGA_RNA-Seq IMMP2L-DYNC1I1 IMMP2L chr7 110886593 - DYNC1I1 chr7 96028175 + Exonic hg38 GBM TCGA-06-0184-01A 9 6 In-Frame Intra-chr q31.1 q21.3 Seq+ 89483 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM33-KCCAT333 RBM33 chr7 155745602 + KCCAT333 chr7 17450995 + Exonic hg38 GBM TCGA-06-0184-01A 7 6 CDS-5'UTR Intra-chr q36.3 89484 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGA2-NUP107 HMGA2 chr12 65838569 + NUP107 chr12 68715627 + Exonic hg38 GBM TCGA-06-0187-01A 8 4 In-Frame Intra-chr q14.3 Transcription factor q15 Seq+ 89485 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGD-CAMTA1 PGD chr1 10399704 + CAMTA1 chr1 7249491 + Exonic hg38 GBM TCGA-06-0190-01A 12 5 Out-of-frame Intra-chr p36.22 p36.31 Tumor suppressor gene Transcription factor Seq+ 89486 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEX14-CLP1 PEX14 chr1 10495321 + CLP1 chr11 57659455 + Exonic hg38 GBM TCGA-06-0190-01A 5 0 CDS-5'UTR Inter-chr p36.22 q12.1 Seq+ 89487 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIAS4-GLYATL2 PIAS4 chr19 4029036 + GLYATL2 chr11 58844524 - Exonic hg38 GBM TCGA-06-0190-01A 4 1 CDS-5'UTR Inter-chr p13.3 q12.1 Seq+ 89488 ChimerSeq TCGA FAWG TCGA_RNA-Seq DMXL2-CDKN2A DMXL2 chr15 51448458 - CDKN2A chr9 21995161 - Exonic hg38 GBM TCGA-06-0190-01A 3 3 Out-of-frame Inter-chr q21.2 p21.3 Oncogene Tumor suppressor gene 89489 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13-EPHB2 MED13 chr17 61984584 - EPHB2 chr1 22710966 + Exonic hg38 GBM TCGA-06-0190-01A 3 1 Out-of-frame Inter-chr q23.2 p36.12 Tumor suppressor gene Seq+ 89490 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZSWIM4-MRI1 ZSWIM4 chr19 13795801 + MRI1 chr19 13768561 + Exonic hg38 GBM TCGA-06-0190-01A 2 1 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 89491 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFASC-PRELP NFASC chr1 204828782 + PRELP chr1 203483169 + Exonic hg38 GBM TCGA-06-0210-01A 94 62 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 89492 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H18-CHMP1A ZC3H18 chr16 88570566 + CHMP1A chr16 89647331 - Exonic hg38 GBM TCGA-06-0210-01A 39 22 5'UTR-CDS Intra-chr q24.2 q24.3 Seq+ 89493 ChimerSeq TCGA FAWG TCGA_RNA-Seq COA1-HECW1 COA1 chr7 43729429 - HECW1 chr7 43541163 + Exonic hg38 GBM TCGA-06-0210-01A 22 9 5'UTR-CDS Intra-chr p13 p14.1 Seq+ 89494 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHMP1A-SPIRE2 CHMP1A chr16 89649351 - SPIRE2 chr16 89858338 + Exonic hg38 GBM TCGA-06-0210-01A 10 4 In-Frame Intra-chr q24.3 q24.3 Seq+ 89495 ChimerSeq TCGA FAWG TCGA_RNA-Seq HECW1-COA1 HECW1 chr7 43479744 + COA1 chr7 43609495 - Exonic hg38 GBM TCGA-06-0210-01A 3 3 CDS-3'UTR Intra-chr p14.1 p13 89496 ChimerSeq TCGA FAWG TCGA_RNA-Seq LANCL2-SEPT14 LANCL2 chr7 55412089 + SEPT14 chr7 55819223 - Exonic hg38 GBM TCGA-06-0211-01A 615 344 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 89497 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC61G-EGFR SEC61G chr7 54757495 - EGFR chr7 55156533 + Exonic hg38 GBM TCGA-06-0211-01A 25 20 In-Frame Intra-chr p11.2 p11.2 TK:EGFR Oncogene Seq+ 89498 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHB-LINGO2 SHB chr9 38016011 - LINGO2 chr9 27950706 - Exonic hg38 GBM TCGA-06-0211-01A 4 1 CDS-5'UTR Intra-chr p13.1 p21.1 Seq+ 89499 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55019365 + SEPT14 chr7 55819223 - Exonic hg38 GBM TCGA-06-0211-01A 2 1 Out-of-frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 89500 ChimerSeq TCGA FAWG TCGA_RNA-Seq STX8-TRIM16L STX8 chr17 9491829 - TRIM16L chr17 18734877 + Exonic hg38 GBM TCGA-06-0221-02A 7 5 In-Frame Intra-chr p13.1 p11.2 Seq+ 89501 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2K4-HCG18 MAP2K4 chr17 12095694 + HCG18 chr6 30296237 - Exonic hg38 GBM TCGA-06-0221-02A 4 4 CDS-5'UTR Inter-chr p12 STE:STE7 Oncogene Tumor suppressor gene Seq+ 89502 ChimerSeq TCGA FAWG TCGA_RNA-Seq HCG18-MAP2K4 HCG18 chr6 30326354 - MAP2K4 chr17 12107790 + Exonic hg38 GBM TCGA-06-0221-02A 2 5 5'UTR-CDS Inter-chr p12 STE:STE7 Oncogene Tumor suppressor gene Seq+ 89503 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNTG2-TRAPPC12 SNTG2 chr2 1210679 + TRAPPC12 chr2 3457621 + Exonic hg38 GBM TCGA-06-0221-02A 2 4 3'UTR-3'UTR Intra-chr 89504 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCND2-FGF23 CCND2 chr12 4288990 + FGF23 chr12 4372697 - Exonic hg38 GBM TCGA-06-0221-02A 1 2 Out-of-frame Intra-chr p13.32 Oncogene p13.32 89505 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLYR1-ADCY9 GLYR1 chr16 4845074 - ADCY9 chr16 4007558 - Exonic hg38 GBM TCGA-06-0221-02A 1 2 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 89506 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCTD-ECE2 DCTD chr4 182914923 - ECE2 chr3 184283785 + Exonic hg38 GBM TCGA-06-0644-01A 29 17 Out-of-frame Inter-chr q35.1 q27.1 Seq+ 89507 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAD1-KCNMA1 ATAD1 chr10 87814438 - KCNMA1 chr10 77251256 - Exonic hg38 GBM TCGA-06-0645-01A 4 4 In-Frame Intra-chr q22.3 Seq+ 89508 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN1-CDK19 ATXN1 chr6 16485972 - CDK19 chr6 110773937 - Exonic hg38 GBM TCGA-06-0646-01A 2 2 5'UTR-5'UTR Intra-chr p22.3 q21 89509 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC6A11-CAV3 SLC6A11 chr3 10875095 + CAV3 chr3 8841344 + Exonic hg38 GBM TCGA-06-0649-01B 2 5 CDS-3'UTR Intra-chr p25.3 p25.3 89510 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERI2-ZNF160 ERI2 chr16 20896308 - ZNF160 chr19 53070262 - Exonic hg38 GBM TCGA-06-0649-01B 2 3 5'UTR-CDS Inter-chr p12.3 q13.42 Transcription factor 89511 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTMR2-DPM1 MTMR2 chr11 95865601 - DPM1 chr20 50935236 - Exonic hg38 GBM TCGA-06-0649-01B 2 2 Out-of-frame Inter-chr q21 q13.13 Seq+ 89512 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYSTM1-GNPDA1 CYSTM1 chr5 140194652 + GNPDA1 chr5 142012041 - Exonic hg38 GBM TCGA-06-0649-01B 2 1 CDS-5'UTR Intra-chr q31.3 q31.3 Seq+ 89513 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1671-USP18 KIAA1671 chr22 25049364 + USP18 chr22 18176772 + Exonic hg38 GBM TCGA-06-0649-01B 2 0 Out-of-frame Intra-chr q11.23 q11.21 89514 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAP1B-CPM RAP1B chr12 68611043 + CPM chr12 68932840 - Exonic hg38 GBM TCGA-06-0686-01A 56 37 5'UTR-5'UTR Intra-chr q15 q15 Seq+ 89515 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP1-XPO5 LRP1 chr12 57145490 + XPO5 chr6 43562346 - Exonic hg38 GBM TCGA-06-0686-01A 10 5 Out-of-frame Inter-chr q13.3 p21.1 Tumor suppressor gene Seq+ 89516 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARCH9-CD2AP 2019_ 3_ 9_ chr12 57757084 + CD2AP chr6 47544606 + Exonic hg38 GBM TCGA-06-0686-01A 5 6 Out-of-frame Inter-chr q14.1 p12.3 Seq+ 89517 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1H-CAPN11 PPM1H chr12 62720171 - CAPN11 chr6 44166758 + Exonic hg38 GBM TCGA-06-0686-01A 2 0 Out-of-frame Inter-chr q14.2 p21.1 Seq+ 89518 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAP1B-MRPL14 RAP1B chr12 68611043 + MRPL14 chr6 44116629 - Exonic hg38 GBM TCGA-06-0686-01A 2 0 5'UTR-5'UTR Inter-chr q15 p21.1 Seq+ 89519 ChimerSeq TCGA FAWG TCGA_RNA-Seq GBAS-PSPHP1 GBAS chr7 55964701 + PSPHP1 chr7 55773181 + Exonic hg38 GBM TCGA-06-0743-01A 124 22 Out-of-frame Intra-chr p11.2 89520 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC4A1AP-GPN1 SLC4A1AP chr2 27669387 + GPN1 chr2 27647836 + Exonic hg38 GBM TCGA-06-0743-01A 25 21 In-Frame Intra-chr p23.3 p23.3 Seq+ 89521 ChimerSeq TCGA FAWG TCGA_RNA-Seq DFFB-SLC25A33 DFFB chr1 3868053 + SLC25A33 chr1 9567284 + Exonic hg38 GBM TCGA-06-0743-01A 1 2 Out-of-frame Intra-chr p36.32 p36.22 89522 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL50-ERP44 MRPL50 chr9 101398501 - ERP44 chr9 100060172 - Exonic hg38 GBM TCGA-06-0744-01A 317 287 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 89523 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC61G-ELDR SEC61G chr7 54752326 - ELDR chr7 55238666 - Exonic hg38 GBM TCGA-06-0744-01A 186 170 3'UTR-3'UTR Intra-chr p11.2 89524 ChimerSeq TCGA FAWG TCGA_RNA-Seq RMI1-STX17 RMI1 chr9 83980891 + STX17 chr9 99928778 + Exonic hg38 GBM TCGA-06-0744-01A 17 20 5'UTR-CDS Intra-chr q21.32 q31.1 Seq+ 89525 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM219A-POLN FAM219A chr9 34458204 - POLN chr4 2095933 - Exonic hg38 GBM TCGA-06-0744-01A 8 5 Out-of-frame Inter-chr p13.3 p16.3 Seq+ 89526 ChimerSeq TCGA FAWG TCGA_RNA-Seq EBF4-TMC2 EBF4 chr20 2693782 + TMC2 chr20 2641134 + Exonic hg38 GBM TCGA-06-0747-01A 14 7 Out-of-frame Intra-chr p13 Transcription factor p13 Seq+ 89527 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN2-RPL6 ATXN2 chr12 111598784 - RPL6 chr12 112411442 - Exonic hg38 GBM TCGA-06-0747-01A 6 5 CDS-5'UTR Intra-chr q24.12 q24.13 Seq+ 89528 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55200413 + SEPT14 chr7 55796092 - Exonic hg38 GBM TCGA-06-0750-01A 181 55 Out-of-frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 89529 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF713-LANCL2 ZNF713 chr7 55906379 + LANCL2 chr7 55391793 + Exonic hg38 GBM TCGA-06-0750-01A 21 15 5'UTR-CDS Intra-chr p11.2 Transcription factor p11.2 89530 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHDC8A-GPR37L1 KLHDC8A chr1 205336800 - GPR37L1 chr1 202127740 + Exonic hg38 GBM TCGA-06-0750-01A 3 6 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 89531 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRN2-SNRPE LRRN2 chr1 204685320 - SNRPE chr1 203865041 + Exonic hg38 GBM TCGA-06-0750-01A 1 2 5'UTR-5'UTR Intra-chr q32.1 q32.1 89532 ChimerSeq TCGA FAWG TCGA_RNA-Seq OPA3-EIF1 OPA3 chr19 45584623 - EIF1 chr17 41689778 + Exonic hg38 GBM TCGA-06-0878-01A 5 5 In-Frame Inter-chr q13.32 q21.2 Seq+ 89533 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBRSL1-SFSWAP FBRSL1 chr12 132490861 + SFSWAP chr12 131778065 + Exonic hg38 GBM TCGA-06-0882-01A 15 4 In-Frame Intra-chr q24.33 q24.33 Seq+ 89534 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF689-ZNF48 ZNF689 chr16 30605081 - ZNF48 chr16 30397855 + Exonic hg38 GBM TCGA-06-0882-01A 12 4 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Transcription factor 89535 ChimerSeq TCGA FAWG TCGA_RNA-Seq PXDN-TRIP12 PXDN chr2 1648172 - TRIP12 chr2 229774261 - Exonic hg38 GBM TCGA-06-0882-01A 10 0 Out-of-frame Intra-chr p25.3 q36.3 Seq+ 89536 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIP12-CPS1 TRIP12 chr2 229785757 - CPS1 chr2 210556719 + Exonic hg38 GBM TCGA-06-0882-01A 8 2 In-Frame Intra-chr q36.3 q34 Seq+ 89537 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP3-CEPT1 SRGAP3 chr3 9248885 - CEPT1 chr1 111174879 + Exonic hg38 GBM TCGA-06-0882-01A 3 3 Out-of-frame Inter-chr p25.3 Tumor suppressor gene p13.3 Seq+ 89538 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCARB1-SFSWAP SCARB1 chr12 124863595 - SFSWAP chr12 131725405 + Exonic hg38 GBM TCGA-06-0882-01A 3 1 In-Frame Intra-chr q24.31 q24.33 Seq+ 89539 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL27-EFCAB3 MRPL27 chr17 50370032 - EFCAB3 chr17 62377968 + Exonic hg38 GBM TCGA-06-0882-01A 2 0 Out-of-frame Intra-chr q21.33 q23.2 Seq+ 89540 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGAT1-FLT4 MGAT1 chr5 180808648 - FLT4 chr5 180631778 - Exonic hg38 GBM TCGA-06-1804-01A 26 18 5'UTR-CDS Intra-chr q35.3 q35.3 TK:VEGFR Oncogene Seq+ 89541 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIP2B-TMBIM6 DIP2B chr12 50505240 + TMBIM6 chr12 49752464 + Exonic hg38 GBM TCGA-06-1804-01A 24 12 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 89542 ChimerSeq TCGA FAWG TCGA_RNA-Seq TDRD3-ESD TDRD3 chr13 60535233 + ESD chr13 46771496 - Exonic hg38 GBM TCGA-06-1804-01A 12 8 In-Frame Intra-chr q21.2 q14.2 Seq+ 89543 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A9-BCL2L13 SLC39A9 chr14 69442266 + BCL2L13 chr22 17655662 + Exonic hg38 GBM TCGA-06-1804-01A 8 9 CDS-5'UTR Inter-chr q24.1 q11.21 Seq+ 89544 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG5-PDSS2 ATG5 chr6 106201972 - PDSS2 chr6 107154777 - Exonic hg38 GBM TCGA-06-1804-01A 5 7 Out-of-frame Intra-chr q21 q21 Tumor suppressor gene Seq+ 89545 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAVER1-DOCK6 RAVER1 chr19 10328642 - DOCK6 chr19 11245878 - Exonic hg38 GBM TCGA-06-1804-01A 4 6 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 89546 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP11-MRPS31 AKAP11 chr13 42308609 + MRPS31 chr13 40729601 - Exonic hg38 GBM TCGA-06-2558-01A 32 23 Out-of-frame Intra-chr q14.11 q14.11 Seq+ 89547 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC26A10-METTL21B SLC26A10 chr12 57620452 + METTL21B chr12 57780255 + Exonic hg38 GBM TCGA-06-2558-01A 12 3 Out-of-frame Intra-chr q13.3 Seq+ 89548 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR2A-ASAP2 POLR2A chr17 7484857 + ASAP2 chr2 9279317 + Exonic hg38 GBM TCGA-06-2558-01A 7 1 3'UTR-CDS Inter-chr p13.1 p25.1 Seq+ 89549 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB4-ACADVL ZBTB4 chr17 7479456 - ACADVL chr17 7220604 + Exonic hg38 GBM TCGA-06-2558-01A 3 1 5'UTR-5'UTR Intra-chr Tumor suppressor gene Transcription factor p13.1 Seq+ 89550 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCEA1-ALKAL1 TCEA1 chr8 54010430 - ALKAL1 chr8 52542445 - Exonic hg38 GBM TCGA-06-2558-01A 2 1 Out-of-frame Intra-chr q11.23 q11.23 89551 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIDINS220-MIR7515HG KIDINS220 chr2 8796771 - MIR7515HG chr2 6626238 - Exonic hg38 GBM TCGA-06-2558-01A 1 3 3'UTR-3'UTR Intra-chr p25.1 p25.2 89552 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF678-SMIM22 ZNF678 chr1 227563724 + SMIM22 chr16 4794952 + Exonic hg38 GBM TCGA-06-2558-01A 1 3 5'UTR-5'UTR Inter-chr q42.13 Transcription factor p13.3 89553 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIP4K2C-DCTN2 PIP4K2C chr12 57596031 + DCTN2 chr12 57535845 - Exonic hg38 GBM TCGA-06-2558-01A 1 2 In-Frame Intra-chr q13.3 q13.3 89554 ChimerSeq TCGA FAWG TCGA_RNA-Seq VWC2-RAB20 VWC2 chr7 49776131 + RAB20 chr13 110524197 - Exonic hg38 GBM TCGA-06-2558-01A 1 2 Out-of-frame Inter-chr p12.2 q34 Seq+ 89555 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOPX-PDCL2P1 HOPX chr4 56681255 - PDCL2P1 chrX 23198345 + Exonic hg38 GBM TCGA-06-2559-01A 80 1 Out-of-frame Inter-chr q12 Tumor suppressor gene p22.11 89556 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1211-NMU KIAA1211 chr4 56179430 + NMU chr4 55630460 - Exonic hg38 GBM TCGA-06-2559-01A 58 25 5'UTR-CDS Intra-chr q12 q12 Seq+ 89557 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSP2-DCUN1D4 CTDSP2 chr12 57846372 - DCUN1D4 chr4 51899270 + Exonic hg38 GBM TCGA-06-2559-01A 36 19 Out-of-frame Inter-chr q14.1 q12 Seq+ 89558 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM165-PDGFRA TMEM165 chr4 55396396 + PDGFRA chr4 54267289 + Exonic hg38 GBM TCGA-06-2559-01A 19 27 In-Frame Intra-chr q12 q12 Oncogene Seq+ 89559 ChimerSeq TCGA FAWG TCGA_RNA-Seq AASDH-LRRC66 AASDH chr4 56351342 - LRRC66 chr4 52003392 - Exonic hg38 GBM TCGA-06-2559-01A 14 10 Out-of-frame Intra-chr q12 q12 Seq+ 89560 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSFM-METTL21B TSFM chr12 57783283 + METTL21B chr12 57773017 + Exonic hg38 GBM TCGA-06-2559-01A 4 1 Out-of-frame Intra-chr q14.1 Seq+ 89561 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN31-AVIL TSPAN31 chr12 57747131 + AVIL chr12 57797995 - Exonic hg38 GBM TCGA-06-2559-01A 2 0 In-Frame Intra-chr q14.1 q14.1 Seq+ 89562 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD24-SCML4 CD24 chr6 106974578 - SCML4 chr6 107745143 - Exonic hg38 GBM TCGA-06-2559-01A 1 2 Out-of-frame Intra-chr q21 q21 Transcription factor 89563 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOPX-PDCL2 HOPX chr4 56681255 - PDCL2 chr4 55582237 - Exonic hg38 GBM TCGA-06-2559-01A 1000 1000 5'UTR-CDS Intra-chr q12 Tumor suppressor gene q12 Seq+ 89564 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP5-ATG16L2 LRP5 chr11 68439916 + ATG16L2 chr11 72828359 + Exonic hg38 GBM TCGA-06-2561-01A 6 7 Out-of-frame Intra-chr q13.2 q13.4 Seq+ 89565 ChimerSeq TCGA FAWG TCGA_RNA-Seq MFSD6-CALCRL MFSD6 chr2 190437561 + CALCRL chr2 187363502 - Exonic hg38 GBM TCGA-06-2561-01A 5 4 In-Frame Intra-chr q32.2 q32.1 Seq+ 89566 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP170-C1orf100 CEP170 chr1 243186259 - C1orf100 chr1 244364688 + Exonic hg38 GBM TCGA-06-2561-01A 5 3 5'UTR-5'UTR Intra-chr q44 Seq+ 89567 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFF3-ITSN2 AFF3 chr2 99672538 - ITSN2 chr2 24212748 - Exonic hg38 GBM TCGA-06-2561-01A 1 2 In-Frame Intra-chr q11.2 Oncogene p23.3 89568 ChimerSeq TCGA FAWG TCGA_RNA-Seq ICE2-ALDH1A2 ICE2 chr15 60476063 - ALDH1A2 chr15 58107468 - Exonic hg38 GBM TCGA-06-2562-01A 21 19 5'UTR-5'UTR Intra-chr q22.2 q21.3 Tumor suppressor gene 89569 ChimerSeq TCGA FAWG TCGA_RNA-Seq GIGYF2-NGEF GIGYF2 chr2 232756334 + NGEF chr2 232885369 - Exonic hg38 GBM TCGA-06-2562-01A 6 7 Out-of-frame Intra-chr q37.1 q37.1 Seq+ 89570 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK5RAP2-AVEN CDK5RAP2 chr9 120437295 - AVEN chr15 33875995 - Exonic hg38 GBM TCGA-06-2562-01A 7 1 In-Frame Inter-chr q33.2 q14 Seq+ 89571 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB27A-ASTN2 RAB27A chr15 55223889 - ASTN2 chr9 116863733 - Exonic hg38 GBM TCGA-06-2562-01A 7 0 In-Frame Inter-chr q21.3 q33.1 Seq+ 89572 ChimerSeq TCGA FAWG TCGA_RNA-Seq SV2B-AQP9 SV2B chr15 91128810 + AQP9 chr15 58166673 + Exonic hg38 GBM TCGA-06-2562-01A 2 4 5'UTR-5'UTR Intra-chr q26.1 q21.3 Seq+ 89573 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAS7-CHMP4A GAS7 chr17 10019777 - CHMP4A chr14 24211829 - Exonic hg38 GBM TCGA-06-2562-01A 2 0 CDS-5'UTR Inter-chr p13.1 q12 Seq+ 89574 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENTPD7-IDE ENTPD7 chr10 99679875 + IDE chr10 92490595 - Exonic hg38 GBM TCGA-06-2563-01A 7 11 In-Frame Intra-chr q24.2 q23.33 Seq+ 89575 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSTN-CCDC127 DSTN chr20 17570211 + CCDC127 chr5 205958 - Exonic hg38 GBM TCGA-06-2564-01A 9 6 Out-of-frame Inter-chr p12.1 p15.33 Seq+ 89576 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC127-TERT CCDC127 chr5 216729 - TERT chr5 1282624 - Exonic hg38 GBM TCGA-06-2564-01A 3 3 In-Frame Intra-chr p15.33 p15.33 Oncogene Seq+ 89577 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK1E-DDX17 CSNK1E chr22 38294404 - DDX17 chr22 38485118 - Exonic hg38 GBM TCGA-06-2565-01A 161 79 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 89578 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF1B-EPB41 KIF1B chr1 10324062 + EPB41 chr1 28987431 + Exonic hg38 GBM TCGA-06-2565-01A 22 18 CDS-5'UTR Intra-chr p36.22 Tumor suppressor gene p35.3 Tumor suppressor gene Seq+ 89579 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKI-SSU72 SKI chr1 2229735 + SSU72 chr1 1564916 - Exonic hg38 GBM TCGA-06-2565-01A 8 13 Out-of-frame Intra-chr p36.33 Transcription factor p36.33 Seq+ 89580 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGRN-PLCH2 AGRN chr1 1022462 + PLCH2 chr1 2430338 + Exonic hg38 GBM TCGA-06-2565-01A 6 7 CDS-3'UTR Intra-chr p36.33 p36.32 89581 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC61G-EGFR SEC61G chr7 54755779 - EGFR chr7 55142286 + Exonic hg38 GBM TCGA-06-2565-01A 1 1 Out-of-frame Intra-chr p11.2 p11.2 TK:EGFR Oncogene Seq+ 89582 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSR1-DMD SSR1 chr6 7309917 - DMD chrX 32310276 - Exonic hg38 GBM TCGA-06-2569-01A 48 20 In-Frame Inter-chr p24.3 p21.1 Tumor suppressor gene Seq+ 89583 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR59-ASB9 WDR59 chr16 74908908 - ASB9 chrX 15254844 - Exonic hg38 GBM TCGA-06-2569-01A 13 3 Out-of-frame Inter-chr q23.1 p22.2 Seq+ 89584 ChimerSeq TCGA FAWG TCGA_RNA-Seq COX14-GPD1 COX14 chr12 50112301 + GPD1 chr12 50106805 + Exonic hg38 GBM TCGA-06-2569-01A 9 0 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 89585 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM2-TSFM R3HDM2 chr12 57395749 - TSFM chr12 57783110 + Exonic hg38 GBM TCGA-06-2570-01A 51 18 5'UTR-CDS Intra-chr q13.3 q14.1 89586 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4B-SNTG1 KDM4B chr19 5047669 + SNTG1 chr8 50172561 + Exonic hg38 GBM TCGA-06-2570-01A 6 2 CDS-5'UTR Inter-chr p13.3 q11.21 Seq+ 89587 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEBPZOS-TAF7L CEBPZOS chr2 37201726 + TAF7L chrX 101275281 - Exonic hg38 GBM TCGA-06-2570-01A 2 5 5'UTR-CDS Inter-chr p22.2 q22.1 89588 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDLIM5-TIMM23 PDLIM5 chr4 94455384 + TIMM23 chr10 45982523 + Exonic hg38 GBM TCGA-06-2570-01A 2 0 In-Frame Inter-chr q22.3 q11.22 Seq+ 89589 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD1-PARK2 NSD1 chr5 177248324 + PARK2 chr6 161569416 - Exonic hg38 GBM TCGA-06-5408-01A 3 1 Out-of-frame Inter-chr q35.3 Oncogene Tumor suppressor gene Seq+ 89590 ChimerSeq TCGA FAWG TCGA_RNA-Seq RREB1-EEF1E1 RREB1 chr6 7108060 + EEF1E1 chr6 8097467 - Exonic hg38 GBM TCGA-06-5412-01A 7 7 5'UTR-CDS Intra-chr p24.3 Transcription factor p24.3 Tumor suppressor gene Seq+ 89591 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC5L-PAQR8 CDC5L chr6 44408632 + PAQR8 chr6 52403162 + Exonic hg38 GBM TCGA-06-5412-01A 6 10 3'UTR-5'UTR Intra-chr p21.1 Transcription factor p12.2 Seq+ 89592 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLIPR1L2-NDUFA12 GLIPR1L2 chr12 75391350 + NDUFA12 chr12 94897310 - Exonic hg38 GBM TCGA-06-5412-01A 3 2 CDS-3'UTR Intra-chr q21.2 q22 89593 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP6-EGLN3 AKAP6 chr14 32433817 + EGLN3 chr14 33931215 - Exonic hg38 GBM TCGA-06-5413-01A 128 56 In-Frame Intra-chr q12 q13.1 Tumor suppressor gene Seq+ 89594 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEX3C-ATP9B MEX3C chr18 51196567 - ATP9B chr18 79277054 + Exonic hg38 GBM TCGA-06-5413-01A 4 1 Out-of-frame Intra-chr q21.2 Seq+ 89595 ChimerSeq TCGA FAWG TCGA_RNA-Seq NR2F2-DCC NR2F2 chr15 96334603 + DCC chr18 53066046 + Exonic hg38 GBM TCGA-06-5413-01A 3 3 Out-of-frame Inter-chr q26.2 Transcription factor q21.2 Oncogene Tumor suppressor gene Seq+ 89596 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTTN-MAPK4 RTTN chr18 70199414 - MAPK4 chr18 50663089 + Exonic hg38 GBM TCGA-06-5413-01A 2 7 5'UTR-5'UTR Intra-chr q22.2 q21.1 Seq+ 89597 ChimerSeq TCGA FAWG TCGA_RNA-Seq RGS6-AKAP6 RGS6 chr14 72352194 + AKAP6 chr14 32577120 + Exonic hg38 GBM TCGA-06-5413-01A 1 2 Out-of-frame Intra-chr q24.2 q12 89598 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRZ1-MET PTPRZ1 chr7 121873557 + MET chr7 116699071 + Exonic hg38 GBM TCGA-06-5417-01A 2 2 5'UTR-5'UTR Intra-chr q31.32 q31.2 TK:Met Oncogene Pub Seq+ 89599 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP85L-ROS1 CEP85L chr6 118481779 - ROS1 chr6 117320030 - Exonic hg38 GBM TCGA-06-5418-01A 7 9 In-Frame Intra-chr q22.31 q22.1 Oncogene KB Pub Seq+ 89600 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUDS3-CDK4 SUDS3 chr12 118391282 + CDK4 chr12 57751736 - Exonic hg38 GBM TCGA-06-5856-01A 108 85 CDS-5'UTR Intra-chr q24.23 q14.1 CMGC:CDK Oncogene Seq+ 89601 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD1B-KDM2B SETD1B chr12 121810835 + KDM2B chr12 121575859 - Exonic hg38 GBM TCGA-06-5856-01A 115 44 Out-of-frame Intra-chr q24.31 q24.31 Transcription factor Seq+ 89602 ChimerSeq TCGA FAWG TCGA_RNA-Seq C12orf49-SRRM4 C12orf49 chr12 116737790 - SRRM4 chr12 119162671 + Exonic hg38 GBM TCGA-06-5856-01A 74 21 CDS-3'UTR Intra-chr q24.22 q24.23 Seq+ 89603 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM120B-AVIL TMEM120B chr12 121712964 + AVIL chr12 57799920 - Exonic hg38 GBM TCGA-06-5856-01A 67 29 In-Frame Intra-chr q24.31 q14.1 Seq+ 89604 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAA60-IL32 NAA60 chr16 3458181 + IL32 chr16 3065784 + Exonic hg38 GBM TCGA-06-5856-01A 52 72 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 89605 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM2B-KSR2 KDM2B chr12 121548877 - KSR2 chr12 117860431 - Exonic hg38 GBM TCGA-06-5856-01A 43 16 Out-of-frame Intra-chr q24.31 Transcription factor q24.23 TKL:RAF Seq+ 89606 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSP2-MDM2 CTDSP2 chr12 57846372 - MDM2 chr12 68809208 + Exonic hg38 GBM TCGA-06-5856-01A 40 26 Out-of-frame Intra-chr q14.1 q15 Oncogene Seq+ 89607 ChimerSeq TCGA FAWG TCGA_RNA-Seq VASN-RBFOX1 VASN chr16 4371993 + RBFOX1 chr16 7709056 + Exonic hg38 GBM TCGA-06-5856-01A 22 10 3'UTR-CDS Intra-chr p13.3 Seq+ 89608 ChimerSeq TCGA FAWG TCGA_RNA-Seq HLCS-MIR99AHG HLCS chr21 36962036 - MIR99AHG chr21 16487490 + Exonic hg38 GBM TCGA-06-5856-01A 15 8 5'UTR-5'UTR Intra-chr q22.13 q21.1 89609 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOP3B-1 TOP3B chr22 21963923 - 1 chr22 22058479 + Exonic hg38 GBM TCGA-06-5856-01A 12 6 CDS-5'UTR Intra-chr q11.22 89610 ChimerSeq TCGA FAWG TCGA_RNA-Seq C12orf49-HSPB8 C12orf49 chr12 116737790 - HSPB8 chr12 119187025 + Exonic hg38 GBM TCGA-06-5856-01A 11 9 In-Frame Intra-chr q24.22 q24.23 89611 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANBP3-PRM1 RANBP3 chr19 5927968 - PRM1 chr16 11281230 - Exonic hg38 GBM TCGA-06-5856-01A 11 5 Out-of-frame Inter-chr p13.3 p13.13 Seq+ 89612 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRACR2A-C12orf4 CRACR2A chr12 3673446 - C12orf4 chr12 4491234 - Exonic hg38 GBM TCGA-06-5856-01A 9 11 Out-of-frame Intra-chr p13.32 p13.32 89613 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUDT16L1-FAHD1 NUDT16L1 chr16 4694238 + FAHD1 chr16 1838016 + Exonic hg38 GBM TCGA-06-5856-01A 8 4 In-Frame Intra-chr p13.3 p13.3 Seq+ 89614 ChimerSeq TCGA FAWG TCGA_RNA-Seq CENPU-CFAP97 CENPU chr4 184710072 - CFAP97 chr4 185161962 - Exonic hg38 GBM TCGA-06-5856-01A 8 2 3'UTR-3'UTR Intra-chr q35.1 q35.1 89615 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP1-1 LRP1 chr12 57185205 + 1 chr22 22058479 + Exonic hg38 GBM TCGA-06-5856-01A 7 5 Out-of-frame Inter-chr q13.3 89616 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK3-ATP23 TAOK3 chr12 118372648 - ATP23 chr12 57945628 + Exonic hg38 GBM TCGA-06-5856-01A 7 0 5'UTR-5'UTR Intra-chr q24.23 89617 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT2-ERBB3 CNOT2 chr12 70278274 + ERBB3 chr12 56100174 + Exonic hg38 GBM TCGA-06-5856-01A 3 2 In-Frame Intra-chr q15 q13.2 Oncogene Seq+ 89618 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRAMP1-TVP23A CRAMP1 chr16 1641187 + TVP23A chr16 10775096 - Exonic hg38 GBM TCGA-06-5856-01A 3 2 In-Frame Intra-chr p13.3 p13.13 89619 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL41-NACA RPL41 chr12 56117211 + NACA chr12 56714687 - Exonic hg38 GBM TCGA-06-5856-01A 1 7 Out-of-frame Intra-chr q13.2 q13.3 Seq+ 89620 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3IP-ERBB3 RAB3IP chr12 69756663 + ERBB3 chr12 56083751 + Exonic hg38 GBM TCGA-06-5856-01A 2 2 Out-of-frame Intra-chr q15 q13.2 Oncogene Seq+ 89621 ChimerSeq TCGA FAWG TCGA_RNA-Seq KNTC1-METTL7A KNTC1 chr12 122539754 + METTL7A chr12 50925037 + Exonic hg38 GBM TCGA-06-5856-01A 2 1 CDS-5'UTR Intra-chr q24.31 q13.12 89622 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATR-PHF14 ATR chr3 142566121 - PHF14 chr7 11111350 + Exonic hg38 GBM TCGA-06-5856-01A 2 0 Out-of-frame Inter-chr q23 Atypical:PIKK Oncogene Tumor suppressor gene p21.3 Seq+ 89623 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSFM-IFNG TSFM chr12 57786291 + IFNG chr12 68155365 - Exonic hg38 GBM TCGA-06-5856-01A 1000 1000 In-Frame Intra-chr q14.1 q15 89624 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K13-CD37 MAP3K13 chr3 185285643 + CD37 chr19 49336909 + Exonic hg38 GBM TCGA-06-5859-01A 32 13 Out-of-frame Inter-chr q27.2 q13.33 Seq+ 89625 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAD4-CPLX4 SMAD4 chr18 51059916 + CPLX4 chr18 59276734 - Exonic hg38 GBM TCGA-06-5859-01A 14 17 CDS-3'UTR Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q21.32 89626 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAD4-RAX SMAD4 chr18 51059916 + RAX chr18 59269501 - Exonic hg38 GBM TCGA-06-5859-01A 10 4 Out-of-frame Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q21.32 Transcription factor Seq+ 89627 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDIT3-GLI1 DDIT3 chr12 57520418 - GLI1 chr12 57463665 + Exonic hg38 GBM TCGA-06-5859-01A 4 9 5'UTR-5'UTR Intra-chr q13.3 Oncogene Transcription factor q13.3 Tumor suppressor gene Transcription factor Seq+ 89628 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM2-TSFM R3HDM2 chr12 57430720 - TSFM chr12 57796177 + Exonic hg38 GBM TCGA-06-5859-01A 4 0 5'UTR-CDS Intra-chr q13.3 q14.1 89629 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLI1-DCTN2 GLI1 chr12 57460201 + DCTN2 chr12 57535845 - Exonic hg38 GBM TCGA-06-5859-01A 3 0 5'UTR-5'UTR Intra-chr q13.3 Tumor suppressor gene Transcription factor q13.3 Seq+ 89630 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARL13B-DLG1 ARL13B chr3 94003908 + DLG1 chr3 197085756 - Exonic hg38 GBM TCGA-06-A5U1-01A 10 3 In-Frame Intra-chr q11.1 q29 Tumor suppressor gene 89631 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM214B-UBE2R2 FAM214B chr9 35115671 - UBE2R2 chr9 33886881 + Exonic hg38 GBM TCGA-06-A6S0-01A 25 22 3'UTR-CDS Intra-chr p13.3 p13.3 89632 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFASC-SOX13 NFASC chr1 204920740 + SOX13 chr1 204112915 + Exonic hg38 GBM TCGA-06-A6S0-01A 2 1 5'UTR-5'UTR Intra-chr q32.1 q32.1 Transcription factor Seq+ 89633 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTSA-C1orf61 CTSA chr20 45895133 + C1orf61 chr1 156404601 - Exonic hg38 GBM TCGA-06-A6S0-01A 2 0 In-Frame Inter-chr q13.12 q22 89634 ChimerSeq TCGA FAWG TCGA_RNA-Seq VOPP1-LANCL2 VOPP1 chr7 55572271 - LANCL2 chr7 55391793 + Exonic hg38 GBM TCGA-06-A6S0-01A 2 0 In-Frame Intra-chr p11.2 p11.2 89635 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMBIM6-GLUL TMBIM6 chr12 49758762 + GLUL chr1 182388750 - Exonic hg38 GBM TCGA-06-A6S0-01A 1 3 CDS-5'UTR Inter-chr q13.12 q25.3 89636 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55200413 + SEPT14 chr7 55796092 - Exonic hg38 GBM TCGA-06-A6S1-01A 5 6 Out-of-frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 89637 ChimerSeq TCGA FAWG TCGA_RNA-Seq NELFA-QDPR NELFA chr4 2041716 - QDPR chr4 17504475 - Exonic hg38 GBM TCGA-06-A6S1-01A 4 1 5'UTR-CDS Intra-chr p16.3 p15.32 89638 ChimerSeq TCGA FAWG TCGA_RNA-Seq WASHC4-C12orf45 WASHC4 chr12 105160148 + C12orf45 chr12 105060431 + Exonic hg38 GBM TCGA-06-A6S1-01A 2 9 CDS-3'UTR Intra-chr q23.3 q23.3 89639 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKN2A-FAM124A CDKN2A chr9 21994139 - FAM124A chr13 51251468 + Exonic hg38 GBM TCGA-06-A6S1-01A 2 8 In-Frame Inter-chr p21.3 Oncogene Tumor suppressor gene q14.3 89640 ChimerSeq TCGA FAWG TCGA_RNA-Seq VBP1-BRCC3 VBP1 chrX 155216575 + BRCC3 chrX 155072327 + Exonic hg38 GBM TCGA-06-A6S1-01A 1 4 In-Frame Intra-chr q28 q28 Seq+ 89641 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNMB4-C12orf66 KCNMB4 chr12 70367070 + C12orf66 chr12 64194658 - Exonic hg38 GBM TCGA-06-A7TK-01A 724 935 Out-of-frame Intra-chr q15 q14.2 89642 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP1-SYT1 LRP1 chr12 57181291 + SYT1 chr12 79217503 + Exonic hg38 GBM TCGA-06-A7TK-01A 25 57 CDS-5'UTR Intra-chr q13.3 q21.2 89643 ChimerSeq TCGA FAWG TCGA_RNA-Seq OS9-SRGAP1 OS9 chr12 57695843 + SRGAP1 chr12 64016950 + Exonic hg38 GBM TCGA-06-A7TK-01A 36 13 Out-of-frame Intra-chr q13.3 q14.2 89644 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARP11-NINJ2 PARP11 chr12 3873212 - NINJ2 chr12 566178 - Exonic hg38 GBM TCGA-06-A7TK-01A 6 23 In-Frame Intra-chr p13.32 p13.33 89645 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL21B-CNOT2 METTL21B chr12 57773128 + CNOT2 chr12 70310895 + Exonic hg38 GBM TCGA-06-A7TK-01A 10 6 Out-of-frame Intra-chr q15 89646 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSFM-CNOT2 TSFM chr12 57783283 + CNOT2 chr12 70338443 + Exonic hg38 GBM TCGA-06-A7TK-01A 9 6 In-Frame Intra-chr q14.1 q15 89647 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDM2-CACNA1C MDM2 chr12 68809292 + CACNA1C chr12 2633629 + Exonic hg38 GBM TCGA-06-A7TK-01A 7 8 CDS-3'UTR Intra-chr q15 Oncogene p13.33 89648 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBP1-CMTM6 UBP1 chr3 33425590 - CMTM6 chr3 32491886 - Exonic hg38 GBM TCGA-06-A7TL-01A 67 72 Out-of-frame Intra-chr p22.3 Transcription factor p22.3 89649 ChimerSeq TCGA FAWG TCGA_RNA-Seq SATB1-GRM7 SATB1 chr3 18415111 - GRM7 chr3 7680049 + Exonic hg38 GBM TCGA-06-A7TL-01A 10 21 In-Frame Intra-chr p24.3 Transcription factor p26.1 89650 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC11-COLQ HDAC11 chr3 13483564 + COLQ chr3 15453931 - Exonic hg38 GBM TCGA-06-A7TL-01A 9 7 Out-of-frame Intra-chr p25.1 p25.1 89651 ChimerSeq TCGA FAWG TCGA_RNA-Seq STT3B-EMC3 STT3B chr3 31533312 + EMC3 chr3 9977446 - Exonic hg38 GBM TCGA-06-A7TL-01A 5 5 In-Frame Intra-chr p23 p25.3 89652 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRM-PPP4R3A SRM chr1 11058800 - PPP4R3A chr14 91490802 - Exonic hg38 GBM TCGA-08-0386-01A 11 7 Out-of-frame Inter-chr p36.22 TK:Src q32.12 89653 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL26A1-GGCT COL26A1 chr7 101533143 + GGCT chr7 30497235 - Exonic hg38 GBM TCGA-12-0616-01A 16 4 In-Frame Intra-chr q22.1 p14.3 Seq+ 89654 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF1-COL26A1 SMURF1 chr7 99143726 - COL26A1 chr7 101533082 + Exonic hg38 GBM TCGA-12-0616-01A 7 0 In-Frame Intra-chr q22.1 Seq+ 89655 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX13-SDK1 SNX13 chr7 17940284 - SDK1 chr7 4205879 + Exonic hg38 GBM TCGA-12-0616-01A 5 1 Out-of-frame Intra-chr p21.1 p22.2 Seq+ 89656 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE1C-VOPP1 PDE1C chr7 32051554 - VOPP1 chr7 55497690 - Exonic hg38 GBM TCGA-12-0616-01A 3 2 In-Frame Intra-chr p14.3 p11.2 Seq+ 89657 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACHE-VPS50 ACHE chr7 100893165 - VPS50 chr7 93334117 + Exonic hg38 GBM TCGA-12-0616-01A 2 2 In-Frame Intra-chr q22.1 Tumor suppressor gene q21.2 89658 ChimerSeq TCGA FAWG TCGA_RNA-Seq DKC1-ELDR DKC1 chrX 154765998 + ELDR chr7 55238666 - Exonic hg38 GBM TCGA-12-3650-01A 53 41 3'UTR-3'UTR Inter-chr q28 89659 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHM2-TMEM51 PLEKHM2 chr1 15719920 + TMEM51 chr1 15210490 + Exonic hg38 GBM TCGA-12-3650-01A 9 16 CDS-5'UTR Intra-chr p36.21 p36.21 Seq+ 89660 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFX1-C9orf24 NFX1 chr9 33295427 + C9orf24 chr9 34382869 - Exonic hg38 GBM TCGA-12-3652-01A 14 10 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 89661 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE4B-MED18 UBE4B chr1 10130813 + MED18 chr1 28330597 + Exonic hg38 GBM TCGA-12-3652-01A 1 4 CDS-3'UTR Intra-chr p36.22 Tumor suppressor gene p35.3 Seq+ 89662 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-DTX3 FRS2 chr12 69470530 + DTX3 chr12 57609077 + Exonic hg38 GBM TCGA-12-3653-01A 1 2 5'UTR-CDS Intra-chr q15 q13.3 Seq+ 89663 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDC4-SPCS1 SDC4 chr20 45348325 - SPCS1 chr3 52706644 + Exonic hg38 GBM TCGA-12-5295-01A 183 103 In-Frame Inter-chr q13.12 p21.1 Seq+ 89664 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR20-ASNA1 WDR20 chr14 102140172 + ASNA1 chr19 12745377 + Exonic hg38 GBM TCGA-14-0736-02A 101 107 Out-of-frame Inter-chr q32.31 p13.13 Seq+ 89665 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB10-EEPD1 GRB10 chr7 50669722 - EEPD1 chr7 36238985 + Exonic hg38 GBM TCGA-14-0736-02A 7 2 Out-of-frame Intra-chr p12.1 p14.2 Seq+ 89666 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL7-TMEM106B KLHL7 chr7 23152209 + TMEM106B chr7 12214809 + Exonic hg38 GBM TCGA-14-0736-02A 5 6 5'UTR-5'UTR Intra-chr p15.3 p21.3 Seq+ 89667 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH1L-C1orf61 ASH1L chr1 155415744 - C1orf61 chr1 156414753 - Exonic hg38 GBM TCGA-14-0787-01A 44 55 In-Frame Intra-chr q22 Transcription factor q22 Seq+ 89668 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP6V0A1-MB ATP6V0A1 chr17 42470218 + MB chr22 35637208 - Exonic hg38 GBM TCGA-14-0787-01A 19 12 CDS-5'UTR Inter-chr q21.2 q12.3 Seq+ 89669 ChimerSeq TCGA FAWG TCGA_RNA-Seq NISCH-CYHR1 NISCH chr3 52470907 + CYHR1 chr8 144465096 - Exonic hg38 GBM TCGA-14-0787-01A 10 2 CDS-5'UTR Inter-chr p21.1 q24.3 Seq+ 89670 ChimerSeq TCGA FAWG TCGA_RNA-Seq RERE-SLC45A1 RERE chr1 8541214 - SLC45A1 chr1 8335437 + Exonic hg38 GBM TCGA-14-0787-01A 4 3 Out-of-frame Intra-chr p36.23 p36.23 Seq+ 89671 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYTH3-RAB40B CYTH3 chr7 6272474 - RAB40B chr17 82661047 - Exonic hg38 GBM TCGA-14-0787-01A 3 0 Out-of-frame Inter-chr p22.1 q25.3 Seq+ 89672 ChimerSeq TCGA FAWG TCGA_RNA-Seq HARBI1-PTPRS HARBI1 chr11 46615568 - PTPRS chr19 5246045 - Exonic hg38 GBM TCGA-14-0789-01A 6 0 In-Frame Inter-chr p11.2 p13.3 Seq+ 89673 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-RAB11FIP4 NF1 chr17 31265339 + RAB11FIP4 chr17 31517651 + Exonic hg38 GBM TCGA-14-0789-01A 3 1 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 89674 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM65-GALK1 TRIM65 chr17 75891277 - GALK1 chr17 75751737 - Exonic hg38 GBM TCGA-14-0790-01B 6 4 Out-of-frame Intra-chr q25.1 q25.1 89675 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNC1LI1-GADL1 DYNC1LI1 chr3 32570346 - GADL1 chr3 30861765 - Exonic hg38 GBM TCGA-14-0790-01B 2 2 In-Frame Intra-chr p22.3 p23 Seq+ 89676 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUX1-DGKB CUX1 chr7 102028145 + DGKB chr7 14841450 - Exonic hg38 GBM TCGA-14-0790-01B 2 1 CDS-5'UTR Intra-chr q22.1 Tumor suppressor gene Transcription factor p21.2 Seq+ 89677 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H4-TTLL3 ZC3H4 chr19 47086384 - TTLL3 chr3 9854559 + Exonic hg38 GBM TCGA-14-0817-01A 29 10 CDS-3'UTR Inter-chr q13.32 p25.3 Seq+ 89678 ChimerSeq TCGA FAWG TCGA_RNA-Seq JAGN1-ZC3H4 JAGN1 chr3 9893026 + ZC3H4 chr19 47086538 - Exonic hg38 GBM TCGA-14-0817-01A 7 6 In-Frame Inter-chr p25.3 q13.32 Seq+ 89679 ChimerSeq TCGA FAWG TCGA_RNA-Seq FMNL3-TUBA1B FMNL3 chr12 49707055 - TUBA1B chr12 49129722 - Exonic hg38 GBM TCGA-14-0817-01A 6 2 In-Frame Intra-chr q13.12 q13.12 Seq+ 89680 ChimerSeq TCGA FAWG TCGA_RNA-Seq DANCR-PDGFRA DANCR chr4 52714238 + PDGFRA chr4 54277388 + Exonic hg38 GBM TCGA-14-0817-01A 2 5 5'UTR-CDS Intra-chr q12 q12 Oncogene 89681 ChimerSeq TCGA FAWG TCGA_RNA-Seq GDI1-TBC1D8 GDI1 chrX 154438864 + TBC1D8 chr2 101028353 - Exonic hg38 GBM TCGA-14-0871-01A 4 0 Out-of-frame Inter-chr q28 q11.2 Seq+ 89682 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDST3-ZNF483 NDST3 chr4 118143684 + ZNF483 chr9 111576365 + Exonic hg38 GBM TCGA-14-0871-01A 2 0 Out-of-frame Inter-chr q26 q31.3 Transcription factor Seq+ 89683 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXN-NDST3 TXN chr9 110250820 - NDST3 chr4 118138054 + Exonic hg38 GBM TCGA-14-0871-01A 1 2 In-Frame Inter-chr q31.3 q26 Seq+ 89684 ChimerSeq TCGA FAWG TCGA_RNA-Seq FKBP8-SLC1A6 FKBP8 chr19 18533270 - SLC1A6 chr19 14950390 - Exonic hg38 GBM TCGA-14-1034-01A 95 78 Out-of-frame Intra-chr p13.11 p13.12 Seq+ 89685 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF4A1-PHOSPHO1 EIF4A1 chr17 7575258 + PHOSPHO1 chr17 49225004 - Exonic hg38 GBM TCGA-14-1034-01A 32 45 In-Frame Intra-chr p13.1 q21.32 Seq+ 89686 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPOCD1-C1orf234 SPOCD1 chr1 31798207 - C1orf234 chr1 23011200 - Exonic hg38 GBM TCGA-14-1034-01A 1 1 Out-of-frame Intra-chr p35.2 89687 ChimerSeq TCGA FAWG TCGA_RNA-Seq XRN1-SMYD3 XRN1 chr3 142447870 - SMYD3 chr1 245929937 - Exonic hg38 GBM TCGA-14-1402-02A 21 30 In-Frame Inter-chr q23 q44 Transcription factor Seq+ 89688 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNG7-SGTA GNG7 chr19 2702646 - SGTA chr19 2769091 - Exonic hg38 GBM TCGA-14-1402-02A 20 1 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 89689 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCGRT-BCAT2 FCGRT chr19 49514486 + BCAT2 chr19 48800297 - Exonic hg38 GBM TCGA-14-1402-02A 9 7 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 89690 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC22A3-ZDHHC14 SLC22A3 chr6 160408921 + ZDHHC14 chr6 157542585 + Exonic hg38 GBM TCGA-14-1402-02A 5 3 In-Frame Intra-chr q25.3 q25.3 Seq+ 89691 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFT2D1-LPAL2 SFT2D1 chr6 166342419 - LPAL2 chr6 160461375 - Exonic hg38 GBM TCGA-14-1402-02A 4 6 3'UTR-3'UTR Intra-chr q27 q25.3 89692 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIP1-VN1R28P HIP1 chr7 75738801 - VN1R28P chr7 57423101 - Exonic hg38 GBM TCGA-14-1402-02A 4 3 Out-of-frame Intra-chr q11.23 p11.2 89693 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPAL2-NOX3 LPAL2 chr6 160519966 - NOX3 chr6 155411360 - Exonic hg38 GBM TCGA-14-1402-02A 4 3 5'UTR-CDS Intra-chr q25.3 q25.3 89694 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM4-TMEM259 R3HDM4 chr19 913087 - TMEM259 chr19 1010895 - Exonic hg38 GBM TCGA-14-1402-02A 1 10 In-Frame Intra-chr p13.3 p13.3 89695 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC14-NOX3 ZDHHC14 chr6 157593146 + NOX3 chr6 155411360 - Exonic hg38 GBM TCGA-14-1402-02A 2 5 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 89696 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R9A-CYP3A43 PPP1R9A chr7 94911508 + CYP3A43 chr7 99856833 + Exonic hg38 GBM TCGA-14-1402-02A 2 2 In-Frame Intra-chr q21.3 q22.1 Seq+ 89697 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGN3-NDUFB4 HMGN3 chr6 79234546 - NDUFB4 chr3 120601111 + Exonic hg38 GBM TCGA-14-1402-02A 2 0 In-Frame Inter-chr q14.1 Transcription factor q13.33 Seq+ 89698 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC31A-HNRNPDL SEC31A chr4 82878730 - HNRNPDL chr4 82427564 - Exonic hg38 GBM TCGA-14-1402-02A 2 0 In-Frame Intra-chr q21.22 q21.22 89699 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTERF1-VOPP1 MTERF1 chr7 91880657 - VOPP1 chr7 55473045 - Exonic hg38 GBM TCGA-14-1823-01A 22 15 5'UTR-CDS Intra-chr q21.2 Transcription factor p11.2 89700 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT2-YLPM1 CNOT2 chr12 70243480 + YLPM1 chr14 74829213 + Exonic hg38 GBM TCGA-14-1823-01A 2 0 5'UTR-CDS Inter-chr q15 q24.3 Seq+ 89701 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP9-SEC61G AKAP9 chr7 91941147 + SEC61G chr7 54757594 - Exonic hg38 GBM TCGA-14-1823-01A 1 1 CDS-5'UTR Intra-chr q21.2 Oncogene p11.2 89702 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55200413 + SEPT14 chr7 55796092 - Exonic hg38 GBM TCGA-14-1825-01A 1 1 Out-of-frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 89703 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSP2-TSPAN31 CTDSP2 chr12 57846372 - TSPAN31 chr12 57746589 + Exonic hg38 GBM TCGA-16-0846-01A 17 11 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 89704 ChimerSeq TCGA FAWG TCGA_RNA-Seq THRA-GSDMA THRA chr17 40077608 + GSDMA chr17 39965683 + Exonic hg38 GBM TCGA-16-1045-01B 84 53 CDS-5'UTR Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Seq+ 89705 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRB2-HS3ST4 ADGRB2 chr1 31755999 - HS3ST4 chr16 26135612 + Exonic hg38 GBM TCGA-16-1045-01B 13 21 Out-of-frame Inter-chr p35.2 p12.1 89706 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS15-TRABD2B EPS15 chr1 51519199 - TRABD2B chr1 47801619 - Exonic hg38 GBM TCGA-16-1045-01B 9 2 In-Frame Intra-chr p32.3 p33 Seq+ 89707 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHIC2-ADGRL3 CHIC2 chr4 54013837 - ADGRL3 chr4 61383124 + Exonic hg38 GBM TCGA-19-0957-02A 70 32 CDS-5'UTR Intra-chr q12 q13.1 Oncogene 89708 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIA-RNLS NFIA chr1 61088680 + RNLS chr10 88362725 - Exonic hg38 GBM TCGA-19-0957-02A 15 17 In-Frame Inter-chr p31.3 Transcription factor q23.31 Seq+ 89709 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB4B-EXOC4 RAB4B chr19 40778391 + EXOC4 chr7 133356330 + Exonic hg38 GBM TCGA-19-0957-02A 9 5 In-Frame Inter-chr q13.2 q33 Seq+ 89710 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC4-RAB4B EXOC4 chr7 133317390 + RAB4B chr19 40780019 + Exonic hg38 GBM TCGA-19-0957-02A 5 4 In-Frame Inter-chr q33 q13.2 Seq+ 89711 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHDC1-TMPO AHDC1 chr1 27603397 - TMPO chr12 98544230 + Exonic hg38 GBM TCGA-19-0957-02A 2 0 5'UTR-CDS Inter-chr p35.3 Transcription factor q23.1 Seq+ 89712 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM192-TMEM184C TMEM192 chr4 165100628 - TMEM184C chr4 147671867 + Exonic hg38 GBM TCGA-19-2620-01A 29 19 CDS-3'UTR Intra-chr q32.3 q31.23 89713 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAF1-TRAPPC6A SCAF1 chr19 49646830 + TRAPPC6A chr19 45164970 - Exonic hg38 GBM TCGA-19-2620-01A 18 22 Out-of-frame Intra-chr q13.33 q13.32 Seq+ 89714 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2IP4-ABCB1 GTF2IP4 chr7 73155343 + ABCB1 chr7 87520876 - Exonic hg38 GBM TCGA-19-2620-01A 4 3 5'UTR-CDS Intra-chr q11.23 q21.12 89715 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBFOX2-LGALS2 RBFOX2 chr22 36028240 - LGALS2 chr22 37571931 - Exonic hg38 GBM TCGA-19-2625-01A 28 28 5'UTR-CDS Intra-chr q13.1 Seq+ 89716 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBAP2-NCF4 UBAP2 chr9 33986760 - NCF4 chr22 36875653 + Exonic hg38 GBM TCGA-19-2625-01A 13 6 3'UTR-3'UTR Inter-chr p13.3 Seq+ 89717 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYH9-LARGE1 MYH9 chr22 36322429 - LARGE1 chr22 33922827 - Exonic hg38 GBM TCGA-19-2625-01A 12 1 CDS-5'UTR Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 89718 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNRF3-CDC42EP1 ZNRF3 chr22 28884066 + CDC42EP1 chr22 37566072 + Exonic hg38 GBM TCGA-19-2625-01A 9 1 CDS-5'UTR Intra-chr q12.1 q13.1 Seq+ 89719 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGO-CA9 PIGO chr9 35096561 - CA9 chr9 35679854 + Exonic hg38 GBM TCGA-19-2625-01A 8 0 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 89720 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRB2-RECK CRB2 chr9 123378381 + RECK chr9 36102099 + Exonic hg38 GBM TCGA-19-2625-01A 7 3 Out-of-frame Intra-chr q33.3 p13.3 Tumor suppressor gene Seq+ 89721 ChimerSeq TCGA FAWG TCGA_RNA-Seq RECK-MYO18B RECK chr9 36052323 + MYO18B chr22 26003265 + Exonic hg38 GBM TCGA-19-2625-01A 6 2 Out-of-frame Inter-chr p13.3 Tumor suppressor gene q12.1 Tumor suppressor gene Seq+ 89722 ChimerSeq TCGA FAWG TCGA_RNA-Seq DRG1-MYH9 DRG1 chr22 31427182 + MYH9 chr22 36327488 - Exonic hg38 GBM TCGA-19-2625-01A 4 2 Out-of-frame Intra-chr q12.2 Tumor suppressor gene q12.3 Oncogene Tumor suppressor gene Seq+ 89723 ChimerSeq TCGA FAWG TCGA_RNA-Seq TESK1-LARGE1 TESK1 chr9 35606285 + LARGE1 chr22 33432265 - Exonic hg38 GBM TCGA-19-2625-01A 1 2 Out-of-frame Inter-chr p13.3 TKL:LISK q12.3 89724 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLEC16A-TXNDC11 CLEC16A chr16 10982991 + TXNDC11 chr16 11684245 - Exonic hg38 GBM TCGA-19-4065-02A 1 1 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 89725 ChimerSeq TCGA FAWG TCGA_RNA-Seq NELL2-OS9 NELL2 chr12 44875225 - OS9 chr12 57715760 + Exonic hg38 GBM TCGA-19-5960-01A 17 5 Out-of-frame Intra-chr q12 q13.3 Seq+ 89726 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOBP-AIM1 SOBP chr6 107635469 + AIM1 chr6 106360851 + Exonic hg38 GBM TCGA-19-5960-01A 7 10 Out-of-frame Intra-chr q21 Seq+ 89727 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSFM-CCDC59 TSFM chr12 57787162 + CCDC59 chr12 82223694 - Exonic hg38 GBM TCGA-19-5960-01A 6 2 CDS-3'UTR Intra-chr q14.1 q21.31 89728 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL1-NELL2 METTL1 chr12 57771974 - NELL2 chr12 44610970 - Exonic hg38 GBM TCGA-19-5960-01A 1 2 Out-of-frame Intra-chr q14.1 q12 89729 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC61G-SLC26A8 SEC61G chr7 54752326 - SLC26A8 chr6 35997919 - Exonic hg38 GBM TCGA-19-A60I-01A 576 503 3'UTR-CDS Inter-chr p11.2 p21.31 89730 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGFR-TEAD3 EGFR chr7 55200413 + TEAD3 chr6 35486711 - Exonic hg38 GBM TCGA-19-A60I-01A 102 105 CDS-5'UTR Inter-chr p11.2 TK:EGFR Oncogene p21.31 Transcription factor 89731 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLG1-RUBCN DLG1 chr3 197161640 - RUBCN chr3 197681356 - Exonic hg38 GBM TCGA-19-A60I-01A 13 23 Out-of-frame Intra-chr q29 Tumor suppressor gene q29 89732 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHBDL3-CTLA4 RHBDL3 chr17 32298204 + CTLA4 chr2 203870586 + Exonic hg38 GBM TCGA-19-A60I-01A 3 5 In-Frame Inter-chr q11.2 q33.2 89733 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCUN1D2-CORT DCUN1D2 chr13 113474124 - CORT chr1 10451377 + Exonic hg38 GBM TCGA-19-A60I-01A 3 3 CDS-3'UTR Inter-chr q34 p36.22 89734 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-AMBRA1 FGFR3 chr4 1806934 + AMBRA1 chr11 46418052 - Exonic hg38 GBM TCGA-19-A6J4-01A 591 504 In-Frame Inter-chr p16.3 TK:FGFR Oncogene p11.2 89735 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOA-HMOX2 RHOA chr3 49411820 - HMOX2 chr16 4509412 + Exonic hg38 GBM TCGA-19-A6J4-01A 464 386 5'UTR-3'UTR Inter-chr p21.31 Oncogene Tumor suppressor gene p13.3 89736 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATOH8-USP39 ATOH8 chr2 85754957 + USP39 chr2 85619220 + Exonic hg38 GBM TCGA-19-A6J4-01A 49 45 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 89737 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB2-SHISA5 GRB2 chr17 75393551 - SHISA5 chr3 48479257 - Exonic hg38 GBM TCGA-19-A6J4-01A 19 8 Out-of-frame Inter-chr q25.1 p21.31 89738 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP85L-FAM184A CEP85L chr6 118632453 - FAM184A chr6 118960184 - Exonic hg38 GBM TCGA-19-A6J4-01A 14 13 Out-of-frame Intra-chr q22.31 q22.31 89739 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPEPPS-MYO18A NPEPPS chr17 47545993 + MYO18A chr17 29122253 - Exonic hg38 GBM TCGA-19-A6J4-01A 3 1 Out-of-frame Intra-chr q21.32 q11.2 Oncogene 89740 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF254-ETFB ZNF254 chr19 24087337 + ETFB chr19 51354308 - Exonic hg38 GBM TCGA-19-A6J5-01A 303 633 In-Frame Intra-chr p12 Transcription factor q13.41 89741 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKT2-BTBD2 AKT2 chr19 40285181 - BTBD2 chr19 1997463 - Exonic hg38 GBM TCGA-19-A6J5-01A 67 109 5'UTR-CDS Intra-chr q13.2 AGC:Akt Oncogene p13.3 89742 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL6A1-CIRBP COL6A1 chr21 45981947 + CIRBP chr19 1270928 + Exonic hg38 GBM TCGA-19-A6J5-01A 41 92 CDS-5'UTR Inter-chr q22.3 p13.3 89743 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBX4-COX6B1 PBX4 chr19 19599292 - COX6B1 chr19 35651233 + Exonic hg38 GBM TCGA-19-A6J5-01A 38 48 CDS-5'UTR Intra-chr p13.11 Transcription factor q13.12 89744 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R1A-ZNF665 PPP2R1A chr19 52213110 + ZNF665 chr19 53166347 - Exonic hg38 GBM TCGA-19-A6J5-01A 37 46 Out-of-frame Intra-chr q13.41 Oncogene q13.42 Transcription factor 89745 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF432-COL6A1 ZNF432 chr19 52046854 - COL6A1 chr21 45984269 + Exonic hg38 GBM TCGA-19-A6J5-01A 38 37 Out-of-frame Inter-chr q13.41 Transcription factor q22.3 89746 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRWD1-PPP2R1A BRWD1 chr21 39264460 - PPP2R1A chr19 52215779 + Exonic hg38 GBM TCGA-19-A6J5-01A 35 34 Out-of-frame Inter-chr q22.2 q13.41 Oncogene 89747 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAD1-FAM35A ATAD1 chr10 87784470 - FAM35A chr10 87170478 + Exonic hg38 GBM TCGA-19-A6J5-01A 29 15 Out-of-frame Intra-chr q23.2 89748 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTBN4-AKT2 SPTBN4 chr19 40467305 + AKT2 chr19 40265351 - Exonic hg38 GBM TCGA-19-A6J5-01A 25 13 5'UTR-5'UTR Intra-chr q13.2 q13.2 AGC:Akt Oncogene 89749 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPM-PIAS4 HNRNPM chr19 8474244 + PIAS4 chr19 4037374 + Exonic hg38 GBM TCGA-19-A6J5-01A 12 26 Out-of-frame Intra-chr p13.2 p13.3 89750 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIDN-IPO5P1 MIDN chr19 1255694 + IPO5P1 chr19 23255993 - Exonic hg38 GBM TCGA-19-A6J5-01A 12 18 CDS-3'UTR Intra-chr p13.3 p12 89751 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRTC1-HNRNPM CRTC1 chr19 18749875 + HNRNPM chr19 8483158 + Exonic hg38 GBM TCGA-19-A6J5-01A 7 7 In-Frame Intra-chr p13.11 Oncogene p13.2 89752 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRZ1-MET PTPRZ1 chr7 121928221 + MET chr7 116699071 + Exonic hg38 GBM TCGA-19-A6J5-01A 4 6 CDS-5'UTR Intra-chr q31.32 q31.2 TK:Met Oncogene Pub Seq+ 89753 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP10B-NDST1 ATP10B chr5 160851941 - NDST1 chr5 150520868 + Exonic hg38 GBM TCGA-19-A6J5-01A 1 5 5'UTR-5'UTR Intra-chr q34 q33.1 89754 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3R1-SH3TC2 PIK3R1 chr5 68227009 + SH3TC2 chr5 149052240 - Exonic hg38 GBM TCGA-19-A6J5-01A 1 2 In-Frame Intra-chr q13.1 Oncogene q32 89755 ChimerSeq TCGA FAWG TCGA_RNA-Seq PATL1-TECTA PATL1 chr11 59666853 - TECTA chr11 121187832 + Exonic hg38 GBM TCGA-26-5132-01A 128 46 Out-of-frame Intra-chr q12.1 q23.3 Seq+ 89756 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDZRN4-CPM PDZRN4 chr12 41555760 + CPM chr12 68932840 - Exonic hg38 GBM TCGA-26-5132-01A 4 6 CDS-5'UTR Intra-chr q12 q15 Seq+ 89757 ChimerSeq TCGA FAWG TCGA_RNA-Seq L2HGDH-MTX1P1 L2HGDH chr14 50294115 - MTX1P1 chr1 155233011 + Exonic hg38 GBM TCGA-26-5133-01A 22 8 Out-of-frame Inter-chr q21.3 89758 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND3-PTK2 DENND3 chr8 141144259 + PTK2 chr8 140659678 - Exonic hg38 GBM TCGA-26-5133-01A 4 2 In-Frame Intra-chr q24.3 q24.3 Seq+ 89759 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAB1-PICK1 TAB1 chr22 39421971 + PICK1 chr22 38071682 + Exonic hg38 GBM TCGA-26-5133-01A 4 2 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 89760 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX29-FLRT1 SNX29 chr16 12278036 + FLRT1 chr11 64103194 + Exonic hg38 GBM TCGA-26-5133-01A 4 1 CDS-5'UTR Inter-chr p13.13 q13.1 89761 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTK2-DENND3 PTK2 chr8 141001125 - DENND3 chr8 141136509 + Exonic hg38 GBM TCGA-26-5133-01A 3 1 5'UTR-5'UTR Intra-chr q24.3 q24.3 Seq+ 89762 ChimerSeq TCGA FAWG TCGA_RNA-Seq LNX1-USP46 LNX1 chr4 53507317 - USP46 chr4 52628163 - Exonic hg38 GBM TCGA-26-5134-01A 20 17 Out-of-frame Intra-chr q12 q12 Seq+ 89763 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAP1B-CTDSP2 RAP1B chr12 68611043 + CTDSP2 chr12 57829596 - Exonic hg38 GBM TCGA-26-5135-01A 17 6 5'UTR-CDS Intra-chr q15 q14.1 Seq+ 89764 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC1-NUP107 EXOC1 chr4 55860541 + NUP107 chr12 68741813 + Exonic hg38 GBM TCGA-26-5135-01A 3 0 In-Frame Inter-chr q12 q15 Seq+ 89765 ChimerSeq TCGA FAWG TCGA_RNA-Seq KATNBL1-TNPO3 KATNBL1 chr15 34209951 - TNPO3 chr7 128984259 - Exonic hg38 GBM TCGA-26-5135-01A 2 1 5'UTR-CDS Inter-chr q14 q32.1 Seq+ 89766 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNN3-ALG14 CNN3 chr1 94926838 - ALG14 chr1 94983306 - Exonic hg38 GBM TCGA-26-5136-01B 61 51 In-Frame Intra-chr p21.3 p21.3 Seq+ 89767 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXW9-PRDX2 FBXW9 chr19 12694594 - PRDX2 chr19 12801270 - Exonic hg38 GBM TCGA-26-5136-01B 9 13 CDS-5'UTR Intra-chr p13.13 p13.13 Seq+ 89768 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZSWIM4-UBQLN4 ZSWIM4 chr19 13809220 + UBQLN4 chr1 156042913 - Exonic hg38 GBM TCGA-26-5139-01A 2 2 In-Frame Inter-chr p13.13 q22 Seq+ 89769 ChimerSeq TCGA FAWG TCGA_RNA-Seq LANCL2-VOPP1 LANCL2 chr7 55412089 + VOPP1 chr7 55497690 - Exonic hg38 GBM TCGA-26-A7UX-01B 154 130 In-Frame Intra-chr p11.2 p11.2 89770 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPI2-NXPH1 WIPI2 chr7 5228211 + NXPH1 chr7 8751008 + Exonic hg38 GBM TCGA-26-A7UX-01B 54 56 Out-of-frame Intra-chr p22.1 p21.3 89771 ChimerSeq TCGA FAWG TCGA_RNA-Seq POU6F2-AOAH POU6F2 chr7 39464384 + AOAH chr7 36532344 - Exonic hg38 GBM TCGA-26-A7UX-01B 9 9 Out-of-frame Intra-chr p14.1 Tumor suppressor gene Transcription factor p14.2 89772 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANLN-POU6F2 ANLN chr7 36423943 + POU6F2 chr7 39460547 + Exonic hg38 GBM TCGA-26-A7UX-01B 8 4 Out-of-frame Intra-chr p14.2 p14.1 Tumor suppressor gene Transcription factor Seq+ 89773 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR31HG-HERPUD2 MIR31HG chr9 21559489 - HERPUD2 chr7 35673278 - Exonic hg38 GBM TCGA-26-A7UX-01B 3 12 3'UTR-CDS Inter-chr p21.3 p14.2 89774 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD1-DNER PSMD1 chr2 231080314 + DNER chr2 229512936 - Exonic hg38 GBM TCGA-27-1830-01A 14 9 In-Frame Intra-chr q37.1 q36.3 Seq+ 89775 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANK2-ARHGAP10 ANK2 chr4 113049812 + ARHGAP10 chr4 148023263 + Exonic hg38 GBM TCGA-27-1830-01A 5 13 In-Frame Intra-chr q25 q31.23 Seq+ 89776 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGG-SPINK2 PIGG chr4 508970 + SPINK2 chr4 56810184 - Exonic hg38 GBM TCGA-27-1830-01A 6 8 In-Frame Intra-chr p16.3 q12 Seq+ 89777 ChimerSeq TCGA FAWG TCGA_RNA-Seq DANCR-TIMMDC1 DANCR chr4 52712959 + TIMMDC1 chr3 119500695 + Exonic hg38 GBM TCGA-27-1830-01A 2 0 5'UTR-CDS Inter-chr q12 q13.33 Seq+ 89778 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3D19-ZNF721 SH3D19 chr4 151226047 - ZNF721 chr4 472701 - Exonic hg38 GBM TCGA-27-1830-01A 1 2 5'UTR-5'UTR Intra-chr q31.3 p16.3 Transcription factor 89779 ChimerSeq TCGA FAWG TCGA_RNA-Seq FREM2-MTRF1 FREM2 chr13 38864606 + MTRF1 chr13 41234007 - Exonic hg38 GBM TCGA-27-1831-01A 10 4 In-Frame Intra-chr q13.3 q14.11 Seq+ 89780 ChimerSeq TCGA FAWG TCGA_RNA-Seq NR3C1-HMHB1 NR3C1 chr5 143314002 - HMHB1 chr5 143820480 + Exonic hg38 GBM TCGA-27-1831-01A 5 6 In-Frame Intra-chr q31.3 Transcription factor q31.3 Seq+ 89781 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A12-NFASC SLC25A12 chr2 171893205 - NFASC chr1 204944226 + Exonic hg38 GBM TCGA-27-1831-01A 2 1 CDS-5'UTR Inter-chr q31.1 q32.1 Seq+ 89782 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABR-YWHAE ABR chr17 1179667 - YWHAE chr17 1369741 - Exonic hg38 GBM TCGA-27-1831-01A 2 0 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 89783 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS15-C1orf185 EPS15 chr1 51519199 - C1orf185 chr1 51112464 + Exonic hg38 GBM TCGA-27-1832-01A 6 3 Out-of-frame Intra-chr p32.3 p32.3 Seq+ 89784 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1orf185-RNF11 C1orf185 chr1 51118801 + RNF11 chr1 51236734 + Exonic hg38 GBM TCGA-27-1832-01A 3 1 CDS-5'UTR Intra-chr p32.3 p32.3 Seq+ 89785 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEGF8-CEACAMP3 MEGF8 chr19 42344833 + CEACAMP3 chr19 41604164 + Exonic hg38 GBM TCGA-27-1834-01A 51 23 Out-of-frame Intra-chr q13.2 89786 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFASC-LRRN2 NFASC chr1 204828782 + LRRN2 chr1 204620218 - Exonic hg38 GBM TCGA-27-1834-01A 15 11 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 89787 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806934 + TACC3 chr4 1739702 + Exonic hg38 GBM TCGA-27-1835-01A 10233 6034 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 89788 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMIM13-TTLL5 SMIM13 chr6 11094389 + TTLL5 chr14 75717861 + Exonic hg38 GBM TCGA-27-1835-01A 21 11 Out-of-frame Inter-chr p24.2 q24.3 Seq+ 89789 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAA30-TERT NAA30 chr14 57399883 + TERT chr5 1282624 - Exonic hg38 GBM TCGA-27-1835-01A 7 8 Out-of-frame Inter-chr q22.3 p15.33 Oncogene Seq+ 89790 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAI1-MXRA7 RAI1 chr17 17798513 + MXRA7 chr17 76688176 - Exonic hg38 GBM TCGA-27-1835-01A 6 10 In-Frame Intra-chr p11.2 q25.1 Seq+ 89791 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOJ-C6orf52 RHOJ chr14 63205047 + C6orf52 chr6 10671598 - Exonic hg38 GBM TCGA-27-1835-01A 2 24 CDS-5'UTR Inter-chr q23.2 p24.2 Seq+ 89792 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLPTM1L-PPP2R5E CLPTM1L chr5 1344351 - PPP2R5E chr14 63376108 - Exonic hg38 GBM TCGA-27-1835-01A 7 1 3'UTR-3'UTR Inter-chr p15.33 q23.2 Seq+ 89793 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG14-FUT8 ATG14 chr14 55411602 - FUT8 chr14 65669243 + Exonic hg38 GBM TCGA-27-1835-01A 6 4 Out-of-frame Intra-chr q22.3 q23.3 Seq+ 89794 ChimerSeq TCGA FAWG TCGA_RNA-Seq YARS-RNF19B YARS chr1 32810591 - RNF19B chr1 32949774 - Exonic hg38 GBM TCGA-27-1835-01A 6 4 In-Frame Intra-chr p35.1 p35.1 Seq+ 89795 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARCH9-OS9 2019_ 3_ 9_ chr12 57759020 + OS9 chr12 57716412 + Exonic hg38 GBM TCGA-27-1835-01A 4 9 Out-of-frame Intra-chr q14.1 q13.3 Seq+ 89796 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIIP-CMYA5 MIIP chr1 12030124 + CMYA5 chr5 79788971 + Exonic hg38 GBM TCGA-27-1835-01A 4 8 Out-of-frame Inter-chr p36.22 q14.1 Seq+ 89797 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMYA5-SRRM1 CMYA5 chr5 79789104 + SRRM1 chr1 24672182 + Exonic hg38 GBM TCGA-27-1835-01A 5 2 Out-of-frame Inter-chr q14.1 p36.11 Seq+ 89798 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLIC4-PLOD1 CLIC4 chr1 24814219 + PLOD1 chr1 11947976 + Exonic hg38 GBM TCGA-27-1835-01A 2 5 Out-of-frame Intra-chr p36.11 p36.22 Seq+ 89799 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTLL5-TTC6 TTLL5 chr14 75661637 + TTC6 chr14 37916498 + Exonic hg38 GBM TCGA-27-1835-01A 1 2 Out-of-frame Intra-chr q24.3 q21.1 89800 ChimerSeq TCGA FAWG TCGA_RNA-Seq TACC3-FGFR3 TACC3 chr4 1739767 + FGFR3 chr4 1806902 + Exonic hg38 GBM TCGA-27-1835-01A 1000 1000 Out-of-frame Intra-chr p16.3 p16.3 TK:FGFR Oncogene 89801 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55200413 + SEPT14 chr7 55796092 - Exonic hg38 GBM TCGA-27-1837-01A 121 115 Out-of-frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 89802 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC1-SERINC2 HDAC1 chr1 32302733 + SERINC2 chr1 31410385 + Exonic hg38 GBM TCGA-27-2519-01A 3 6 In-Frame Intra-chr p35.2 Tumor suppressor gene p35.2 Seq+ 89803 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK4-DPF1 MARK4 chr19 45251639 + DPF1 chr19 38222708 - Exonic hg38 GBM TCGA-27-2519-01A 1 2 Out-of-frame Intra-chr q13.32 CAMK:CAMKL Oncogene q13.2 Transcription factor 89804 ChimerSeq TCGA FAWG TCGA_RNA-Seq C8orf33-RPL23AP87 C8orf33 chr8 145053443 + RPL23AP87 chr17 83239924 + Exonic hg38 GBM TCGA-27-2521-01A 24 4 CDS-5'UTR Inter-chr q24.3 q25.3 89805 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD83-FAM138E CD83 chr6 14135974 + FAM138E chr15 101955907 + Exonic hg38 GBM TCGA-27-2521-01A 8 3 Out-of-frame Inter-chr p23 q26.3 Seq+ 89806 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP11B-SOX2OT_exon4 ATP11B chr3 182793786 + SOX2OT_exon4 chr3 181715185 + Exonic hg38 GBM TCGA-27-2521-01A 8 2 Out-of-frame Intra-chr q26.33 Oncogene q26.33 89807 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOCAD-MOB3B FOCAD chr9 20867012 + MOB3B chr9 27359236 - Exonic hg38 GBM TCGA-27-2521-01A 5 6 Out-of-frame Intra-chr p21.3 p21.2 Seq+ 89808 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCD5-HNRNPDL SCD5 chr4 82798306 - HNRNPDL chr4 82428446 - Exonic hg38 GBM TCGA-27-2521-01A 5 2 Out-of-frame Intra-chr q21.22 q21.22 89809 ChimerSeq TCGA FAWG TCGA_RNA-Seq LONP1-ELOF1 LONP1 chr19 5717531 - ELOF1 chr19 11552046 - Exonic hg38 GBM TCGA-27-2523-01A 42 28 Out-of-frame Intra-chr p13.3 p13.2 89810 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUDT2-GLIPR2 NUDT2 chr9 34339166 + GLIPR2 chr9 36162362 + Exonic hg38 GBM TCGA-27-2523-01A 26 17 In-Frame Intra-chr p13.3 p13.3 Seq+ 89811 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KC1-LYST RPS6KC1 chr1 213129889 + LYST chr1 235677619 - Exonic hg38 GBM TCGA-27-2523-01A 24 17 Out-of-frame Intra-chr q32.3 q42.3 Seq+ 89812 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLG1-EHHADH DLG1 chr3 197136542 - EHHADH chr3 185248517 - Exonic hg38 GBM TCGA-27-2523-01A 5 1 Out-of-frame Intra-chr q29 Tumor suppressor gene q27.2 Seq+ 89813 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL36-RANBP3 RPL36 chr19 5690327 + RANBP3 chr19 5928087 - Exonic hg38 GBM TCGA-27-2523-01A 1 3 5'UTR-CDS Intra-chr p13.3 p13.3 89814 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRC2-RND2 MRC2 chr17 62627920 + RND2 chr17 43025960 + Exonic hg38 GBM TCGA-27-2524-01A 71 10 Out-of-frame Intra-chr q23.2 q21.31 Seq+ 89815 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEF2D-ZDHHC5 MEF2D chr1 156468780 - ZDHHC5 chr11 57682422 + Exonic hg38 GBM TCGA-27-2524-01A 7 4 In-Frame Inter-chr q22 Transcription factor q12.1 Seq+ 89816 ChimerSeq TCGA FAWG TCGA_RNA-Seq WSB1-MED1 WSB1 chr17 27294435 + MED1 chr17 39419918 - Exonic hg38 GBM TCGA-27-2524-01A 4 8 Out-of-frame Intra-chr q11.1 q12 Tumor suppressor gene Seq+ 89817 ChimerSeq TCGA FAWG TCGA_RNA-Seq DBF4-GLUL DBF4 chr7 87878225 + GLUL chr1 182385887 - Exonic hg38 GBM TCGA-27-2524-01A 2 0 Out-of-frame Inter-chr q21.12 q25.3 Seq+ 89818 ChimerSeq TCGA FAWG TCGA_RNA-Seq NTPCR-LRRC28 NTPCR chr1 232956443 + LRRC28 chr15 99386030 + Exonic hg38 GBM TCGA-27-2524-01A 2 0 Out-of-frame Inter-chr q42.2 q26.3 Seq+ 89819 ChimerSeq TCGA FAWG TCGA_RNA-Seq OTUD7A-ASCC3 OTUD7A chr15 31570018 - ASCC3 chr6 100540387 - Exonic hg38 GBM TCGA-27-2526-01A 8 4 5'UTR-CDS Inter-chr q13.3 q16.3 Seq+ 89820 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCC1-ITGB4 SMARCC1 chr3 47635190 - ITGB4 chr17 75748841 + Exonic hg38 GBM TCGA-27-2526-01A 2 0 In-Frame Inter-chr p21.31 Tumor suppressor gene q25.1 Seq+ 89821 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHN2-TSPAN33 CHN2 chr7 29146960 + TSPAN33 chr7 129161679 + Exonic hg38 GBM TCGA-27-2528-01A 167 114 5'UTR-CDS Intra-chr p14.3 q32.1 89822 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREB5-KCNH2 CREB5 chr7 28570537 + KCNH2 chr7 150949049 - Exonic hg38 GBM TCGA-27-2528-01A 40 42 Out-of-frame Intra-chr p15.1 Transcription factor q36.1 Seq+ 89823 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERRFI1-VAMP3 ERRFI1 chr1 8026158 - VAMP3 chr1 7777160 + Exonic hg38 GBM TCGA-27-2528-01A 11 6 5'UTR-CDS Intra-chr p36.23 Tumor suppressor gene p36.23 Seq+ 89824 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP3-CREB5 AGAP3 chr7 151087072 + CREB5 chr7 28488175 + Exonic hg38 GBM TCGA-27-2528-01A 1 2 Out-of-frame Intra-chr q36.1 p15.1 Transcription factor 89825 ChimerSeq TCGA FAWG TCGA_RNA-Seq SP4-GPNMB SP4 chr7 21429592 + GPNMB chr7 23273521 + Exonic hg38 GBM TCGA-28-1747-01C 153 106 In-Frame Intra-chr p15.3 Transcription factor p15.3 Seq+ 89826 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55200413 + SEPT14 chr7 55796092 - Exonic hg38 GBM TCGA-28-1747-01C 79 37 Out-of-frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 89827 ChimerSeq TCGA FAWG TCGA_RNA-Seq OTUD7A-FMN1 OTUD7A chr15 31870507 - FMN1 chr15 32798953 - Exonic hg38 GBM TCGA-28-1747-01C 41 15 5'UTR-5'UTR Intra-chr q13.3 89828 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLCO1C1-ZPBP SLCO1C1 chr12 20723254 + ZPBP chr7 49901215 - Exonic hg38 GBM TCGA-28-1747-01C 9 1 CDS-3'UTR Inter-chr p12.2 p12.2 89829 ChimerSeq TCGA FAWG TCGA_RNA-Seq VOPP1-ELDR VOPP1 chr7 55572271 - ELDR chr7 55238666 - Exonic hg38 GBM TCGA-28-1747-01C 6 0 CDS-3'UTR Intra-chr p11.2 89830 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS37B-SIRT4 VPS37B chr12 122895952 - SIRT4 chr12 120303561 + Exonic hg38 GBM TCGA-28-1747-01C 2 1 CDS-5'UTR Intra-chr q24.31 q24.31 Tumor suppressor gene Seq+ 89831 ChimerSeq TCGA FAWG TCGA_RNA-Seq C11orf84-MACROD1 C11orf84 chr11 63819002 + MACROD1 chr11 64015281 - Exonic hg38 GBM TCGA-28-1753-01A 6 1 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 89832 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED27-FLRT1 MED27 chr9 132014337 - FLRT1 chr11 64103194 + Exonic hg38 GBM TCGA-28-1753-01A 4 3 CDS-5'UTR Inter-chr q34.13 q13.1 89833 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6C-C11orf84 PPP6C chr9 125171085 - C11orf84 chr11 63826928 + Exonic hg38 GBM TCGA-28-1753-01A 3 3 Out-of-frame Inter-chr q33.3 q13.1 Seq+ 89834 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGKD-SPP2 DGKD chr2 233390483 + SPP2 chr2 234058836 + Exonic hg38 GBM TCGA-28-2499-01A 25 13 In-Frame Intra-chr q37.1 Seq+ 89835 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRRT-ZAN SRRT chr7 100875712 + ZAN chr7 100779446 + Exonic hg38 GBM TCGA-28-2499-01A 7 3 In-Frame Intra-chr q22.1 q22.1 Seq+ 89836 ChimerSeq TCGA FAWG TCGA_RNA-Seq GIGYF2-THAP4 GIGYF2 chr2 232697392 + THAP4 chr2 241634079 - Exonic hg38 GBM TCGA-28-2499-01A 5 1 5'UTR-CDS Intra-chr q37.1 q37.3 Transcription factor Seq+ 89837 ChimerSeq TCGA FAWG TCGA_RNA-Seq THAP4-ANO7 THAP4 chr2 241601896 - ANO7 chr2 241212094 + Exonic hg38 GBM TCGA-28-2499-01A 1 4 Out-of-frame Intra-chr q37.3 Transcription factor q37.3 89838 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC61G-CHCHD2 SEC61G chr7 54759158 - CHCHD2 chr7 56106570 - Exonic hg38 GBM TCGA-28-2513-01A 3378 294 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 89839 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55200413 + SEPT14 chr7 55796092 - Exonic hg38 GBM TCGA-28-2513-01A 506 213 Out-of-frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 89840 ChimerSeq TCGA FAWG TCGA_RNA-Seq LANCL2-SEPT14 LANCL2 chr7 55366229 + SEPT14 chr7 55846637 - Exonic hg38 GBM TCGA-28-2513-01A 26 19 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 89841 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC61G-PHKG1 SEC61G chr7 54759158 - PHKG1 chr7 56088975 - Exonic hg38 GBM TCGA-28-2513-01A 23 0 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 89842 ChimerSeq TCGA FAWG TCGA_RNA-Seq NBPF3-EPHB2 NBPF3 chr1 21445219 + EPHB2 chr1 22863037 + Exonic hg38 GBM TCGA-28-2513-01A 14 6 In-Frame Intra-chr p36.12 p36.12 Tumor suppressor gene Seq+ 89843 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D14-HTRA3 TBC1D14 chr4 6994302 + HTRA3 chr4 8286561 + Exonic hg38 GBM TCGA-28-5204-01A 80 57 In-Frame Intra-chr p16.1 p16.1 Tumor suppressor gene Seq+ 89844 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLTA-UBE2R2 CLTA chr9 36204179 + UBE2R2 chr9 33911964 + Exonic hg38 GBM TCGA-28-5204-01A 72 43 In-Frame Intra-chr p13.3 p13.3 Seq+ 89845 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPIN1-CNTNAP3P2 SPIN1 chr9 88388538 + CNTNAP3P2 chr9 67082692 + Exonic hg38 GBM TCGA-28-5204-01A 12 2 5'UTR-5'UTR Intra-chr q22.1 q21.11 89846 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM102A-PTGES2 FAM102A chr9 127979992 - PTGES2 chr9 128125441 - Exonic hg38 GBM TCGA-28-5204-01A 10 2 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 89847 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPM3-KHDRBS2 TRPM3 chr9 70681506 - KHDRBS2 chr6 61697253 - Exonic hg38 GBM TCGA-28-5204-01A 9 0 Out-of-frame Inter-chr q21.13 q11.1 Seq+ 89848 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM13C-FAM149B1 FAM13C chr10 59251575 - FAM149B1 chr10 73174687 + Exonic hg38 GBM TCGA-28-5204-01A 7 4 In-Frame Intra-chr q21.1 q22.2 Seq+ 89849 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM149B1-ADK FAM149B1 chr10 73210438 + ADK chr10 74589282 + Exonic hg38 GBM TCGA-28-5204-01A 2 4 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 89850 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSFM-TJAP1 TSFM chr12 57797287 + TJAP1 chr6 43505296 + Exonic hg38 GBM TCGA-28-5207-01A 136 95 Out-of-frame Inter-chr q14.1 p21.1 Seq+ 89851 ChimerSeq TCGA FAWG TCGA_RNA-Seq LHFPL4-OT LHFPL4 chr3 9553685 - OT chr3 181563720 + Exonic hg38 GBM TCGA-28-5207-01A 7 7 Out-of-frame Intra-chr p25.3 89852 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXNRD2-HMOX1 TXNRD2 chr22 19941701 - HMOX1 chr22 35386685 + Exonic hg38 GBM TCGA-28-5207-01A 7 0 Out-of-frame Intra-chr q11.21 q12.3 Seq+ 89853 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTMR6-CDX2 MTMR6 chr13 25267779 - CDX2 chr13 27963369 - Exonic hg38 GBM TCGA-28-5207-01A 4 2 Out-of-frame Intra-chr q12.13 q12.2 Tumor suppressor gene Transcription factor Seq+ 89854 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHMT2-SLC26A10 SHMT2 chr12 57234110 + SLC26A10 chr12 57624866 + Exonic hg38 GBM TCGA-28-5207-01A 1 5 Out-of-frame Intra-chr q13.3 q13.3 89855 ChimerSeq TCGA FAWG TCGA_RNA-Seq LANCL2-PSPHP1 LANCL2 chr7 55366229 + PSPHP1 chr7 55773181 + Exonic hg38 GBM TCGA-28-5208-01A 76 20 Out-of-frame Intra-chr p11.2 p11.2 89856 ChimerSeq TCGA FAWG TCGA_RNA-Seq COBL-SEPT14 COBL chr7 51136158 - SEPT14 chr7 55819223 - Exonic hg38 GBM TCGA-28-5208-01A 28 13 Out-of-frame Intra-chr p12.1 p11.2 Seq+ 89857 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNT1-OS9 CCNT1 chr12 48692239 - OS9 chr12 57715760 + Exonic hg38 GBM TCGA-28-5209-01A 20 9 3'UTR-CDS Intra-chr q13.12 q13.3 Seq+ 89858 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOPX-IGFBP7 HOPX chr4 56681255 - IGFBP7 chr4 57040933 - Exonic hg38 GBM TCGA-28-5216-01A 5 1 5'UTR-CDS Intra-chr q12 Tumor suppressor gene q12 Tumor suppressor gene Seq+ 89859 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDGFRA-GRID2 PDGFRA chr4 54229415 + GRID2 chr4 92590131 + Exonic hg38 GBM TCGA-28-5216-01A 4 0 5'UTR-CDS Intra-chr q12 Oncogene q22.1 Seq+ 89860 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA9-POPDC2 ITGA9 chr3 37519354 + POPDC2 chr3 119642561 - Exonic hg38 GBM TCGA-28-5216-01A 3 3 Out-of-frame Intra-chr p22.2 Oncogene q13.33 Seq+ 89861 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK14-GATAD1 CDK14 chr7 90917724 + GATAD1 chr7 92448752 + Exonic hg38 GBM TCGA-28-5216-01A 2 2 Out-of-frame Intra-chr q21.13 q21.2 Seq+ 89862 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNB1-OMA1 GNB1 chr1 1793245 - OMA1 chr1 58481174 - Exonic hg38 GBM TCGA-28-5216-01A 2 2 Out-of-frame Intra-chr p36.33 p32.1 Seq+ 89863 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3HAV1-SGCE ZC3HAV1 chr7 139073856 - SGCE chr7 94628359 - Exonic hg38 GBM TCGA-28-5216-01A 1 3 Out-of-frame Intra-chr q34 q21.3 89864 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL7-BRAF KLHL7 chr7 23125799 + BRAF chr7 140783157 - Exonic hg38 GBM TCGA-28-5218-01A 7 3 Out-of-frame Intra-chr p15.3 q34 TKL:RAF Oncogene Seq+ 89865 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCA4-CARM1 SMARCA4 chr19 10961174 + CARM1 chr19 10904951 + Exonic hg38 GBM TCGA-28-5220-01A 5 6 5'UTR-CDS Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 89866 ChimerSeq TCGA FAWG TCGA_RNA-Seq NLGN1-NDUFB5 NLGN1 chr3 173605091 + NDUFB5 chr3 179623920 + Exonic hg38 GBM TCGA-28-5220-01A 1 2 Out-of-frame Intra-chr q26.31 q26.33 89867 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF550-CXCL17 ZNF550 chr19 57552627 - CXCL17 chr19 42433856 - Exonic hg38 GBM TCGA-32-1970-01A 178 112 In-Frame Intra-chr q13.43 Transcription factor q13.2 Seq+ 89868 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF544-AP2A1 ZNF544 chr19 58246794 + AP2A1 chr19 49781757 + Exonic hg38 GBM TCGA-32-1970-01A 51 30 In-Frame Intra-chr q13.43 Transcription factor q13.33 Seq+ 89869 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF610-RALA ZNF610 chr19 52336506 + RALA chr7 39706123 + Exonic hg38 GBM TCGA-32-1970-01A 41 13 5'UTR-CDS Inter-chr q13.41 Transcription factor p14.1 Seq+ 89870 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF773-SNRPD2 ZNF773 chr19 57504786 + SNRPD2 chr19 45687727 - Exonic hg38 GBM TCGA-32-1970-01A 26 9 Out-of-frame Intra-chr q13.43 Transcription factor q13.32 Seq+ 89871 ChimerSeq TCGA FAWG TCGA_RNA-Seq JAZF1-CPT1C JAZF1 chr7 28180463 - CPT1C chr19 49708723 + Exonic hg38 GBM TCGA-32-1970-01A 21 14 Out-of-frame Inter-chr p15.1 Transcription factor q13.33 Seq+ 89872 ChimerSeq TCGA FAWG TCGA_RNA-Seq NLGN1-CCDC155 NLGN1 chr3 173398063 + CCDC155 chr19 49412968 + Exonic hg38 GBM TCGA-32-1970-01A 7 4 5'UTR-CDS Inter-chr q26.31 q13.33 89873 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF3K-CIC EIF3K chr19 38624192 + CIC chr19 42271775 + Exonic hg38 GBM TCGA-32-1970-01A 6 7 Out-of-frame Intra-chr q13.2 Oncogene Tumor suppressor gene Transcription factor 89874 ChimerSeq TCGA FAWG TCGA_RNA-Seq AVL9-ZNF544 AVL9 chr7 32495802 + ZNF544 chr19 58260851 + Exonic hg38 GBM TCGA-32-1970-01A 5 3 Out-of-frame Inter-chr p14.3 q13.43 Transcription factor Seq+ 89875 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPLKIP-NLRP11 MPLKIP chr7 40134229 - NLRP11 chr19 55796250 - Exonic hg38 GBM TCGA-32-1970-01A 5 2 Out-of-frame Inter-chr p14.1 q13.43 Seq+ 89876 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF772-ERCC2 ZNF772 chr19 57466959 - ERCC2 chr19 45357699 - Exonic hg38 GBM TCGA-32-1970-01A 3 4 3'UTR-CDS Intra-chr q13.43 Transcription factor q13.32 Oncogene Seq+ 89877 ChimerSeq TCGA FAWG TCGA_RNA-Seq FUZ-ZNF528 FUZ chr19 49808414 - ZNF528 chr19 52401685 + Exonic hg38 GBM TCGA-32-1970-01A 3 1 CDS-5'UTR Intra-chr q13.33 q13.41 Transcription factor Seq+ 89878 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF260-HECW1 ZNF260 chr19 36528219 - HECW1 chr7 43396814 + Exonic hg38 GBM TCGA-32-1970-01A 2 4 5'UTR-CDS Inter-chr q13.12 Transcription factor p14.1 Seq+ 89879 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHPN2-CHN2 RHPN2 chr19 32990514 - CHN2 chr7 29354625 + Exonic hg38 GBM TCGA-32-1970-01A 2 3 Out-of-frame Inter-chr q13.11 p14.3 Seq+ 89880 ChimerSeq TCGA FAWG TCGA_RNA-Seq C7orf31-FKBP9 C7orf31 chr7 25151596 - FKBP9 chr7 33002676 + Exonic hg38 GBM TCGA-32-1970-01A 1 2 Out-of-frame Intra-chr p15.3 p14.3 89881 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO27-RYR1 FBXO27 chr19 39026870 - RYR1 chr19 38543347 + Exonic hg38 GBM TCGA-32-1970-01A 1 1 Out-of-frame Intra-chr q13.2 89882 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPH7-ZMYND19 DPH7 chr9 137564434 - ZMYND19 chr9 137588718 - Exonic hg38 GBM TCGA-32-1980-01A 3 2 Out-of-frame Intra-chr q34.3 q34.3 89883 ChimerSeq TCGA FAWG TCGA_RNA-Seq LUC7L-CPM LUC7L chr16 220649 - CPM chr12 68871956 - Exonic hg38 GBM TCGA-32-1980-01A 3 2 In-Frame Inter-chr p13.3 q15 Seq+ 89884 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZHX3-PDE4C ZHX3 chr20 41267463 - PDE4C chr19 18233400 - Exonic hg38 GBM TCGA-32-1980-01A 3 2 5'UTR-5'UTR Inter-chr q12 Transcription factor p13.11 89885 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC42BPA-HYOU1 CDC42BPA chr1 227213136 - HYOU1 chr11 119049837 - Exonic hg38 GBM TCGA-32-1982-01A 6 1 CDS-5'UTR Inter-chr q42.13 Seq+ 89886 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF263-SUPT6H ZNF263 chr16 3288570 + SUPT6H chr17 28695352 + Exonic hg38 GBM TCGA-32-1982-01A 1 2 Out-of-frame Inter-chr p13.3 Transcription factor q11.2 89887 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGFR-SEPT14P24 EGFR chr7 55200413 + SEPT14P24 chr7 56360538 - Exonic hg38 GBM TCGA-32-5222-01A 558 305 Out-of-frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 89888 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF713-SEPT14 ZNF713 chr7 55906379 + SEPT14 chr7 55846637 - Exonic hg38 GBM TCGA-32-5222-01A 122 148 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 89889 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTOR-CAMTA1 MTOR chr1 11253839 - CAMTA1 chr1 6820181 + Exonic hg38 GBM TCGA-32-5222-01A 70 58 In-Frame Intra-chr p36.22 Oncogene p36.31 Tumor suppressor gene Transcription factor Seq+ 89890 ChimerSeq TCGA FAWG TCGA_RNA-Seq HP1BP3-EMC1 HP1BP3 chr1 20787195 - EMC1 chr1 19242473 - Exonic hg38 GBM TCGA-32-5222-01A 11 5 5'UTR-CDS Intra-chr p36.12 p36.13 89891 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLLT3-IZUMO3 MLLT3 chr9 20620654 - IZUMO3 chr9 24545061 - Exonic hg38 GBM TCGA-32-5222-01A 10 6 In-Frame Intra-chr p21.3 p21.3 Seq+ 89892 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRU-UBIAD1 PTPRU chr1 29236717 + UBIAD1 chr1 11285644 + Exonic hg38 GBM TCGA-32-5222-01A 4 2 In-Frame Intra-chr p35.3 p36.22 Tumor suppressor gene Seq+ 89893 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS11-TEAD2 RPS11 chr19 49498046 + TEAD2 chr19 49351365 - Exonic hg38 GBM TCGA-32-5222-01A 2 0 5'UTR-CDS Intra-chr q13.33 q13.33 Transcription factor Seq+ 89894 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55200413 + SEPT14 chr7 55796092 - Exonic hg38 GBM TCGA-32-5222-01A 1000 1000 Out-of-frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 89895 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-DTX3 FRS2 chr12 69470530 + DTX3 chr12 57609077 + Exonic hg38 GBM TCGA-41-2571-01A 593 1640 5'UTR-CDS Intra-chr q15 q13.3 Seq+ 89896 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSP2-C12orf10 CTDSP2 chr12 57846372 - C12orf10 chr12 53305908 + Exonic hg38 GBM TCGA-41-2571-01A 179 140 Out-of-frame Intra-chr q14.1 q13.13 Seq+ 89897 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP15-PCBP2 USP15 chr12 62260503 + PCBP2 chr12 53454726 + Exonic hg38 GBM TCGA-41-2571-01A 63 37 5'UTR-5'UTR Intra-chr q14.1 q13.13 Seq+ 89898 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM19-TSPAN8 TMEM19 chr12 71689704 + TSPAN8 chr12 71157787 - Exonic hg38 GBM TCGA-41-2571-01A 7 7 CDS-5'UTR Intra-chr q21.1 q21.1 Seq+ 89899 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM19A2-PCBP2 FAM19A2 chr12 62191912 - PCBP2 chr12 53454726 + Exonic hg38 GBM TCGA-41-2571-01A 7 4 Out-of-frame Intra-chr q14.1 q13.13 Seq+ 89900 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMAT5-ASCC2 ZMAT5 chr22 29766872 - ASCC2 chr22 29790548 - Exonic hg38 GBM TCGA-41-2572-01A 110 32 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 89901 ChimerSeq TCGA FAWG TCGA_RNA-Seq SP3-PRCP SP3 chr2 173954873 - PRCP chr11 82853278 - Exonic hg38 GBM TCGA-41-2572-01A 12 1 Out-of-frame Inter-chr q31.1 Transcription factor q14.1 Seq+ 89902 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL18-WDR83OS FBXL18 chr7 5500488 - WDR83OS chr19 12669233 - Exonic hg38 GBM TCGA-41-2572-01A 6 3 In-Frame Inter-chr p22.1 p13.13 Seq+ 89903 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNC13D-FYN UNC13D chr17 75827957 - FYN chr6 111661947 - Exonic hg38 GBM TCGA-41-2572-01A 4 0 3'UTR-CDS Inter-chr q25.1 q21 TK:Src Seq+ 89904 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAU2-LRRC6 STAU2 chr8 73746783 - LRRC6 chr8 132661627 - Exonic hg38 GBM TCGA-41-3915-01A 4 1 5'UTR-5'UTR Intra-chr q21.11 q24.22 Seq+ 89905 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNA1A-VSTM2B CACNA1A chr19 13623878 - VSTM2B chr19 29563846 + Exonic hg38 GBM TCGA-41-3915-01A 3 1 5'UTR-CDS Intra-chr p13.13 q12 89906 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHF2-TRIQK PLEKHF2 chr8 95134030 + TRIQK chr8 92954564 - Exonic hg38 GBM TCGA-41-3915-01A 2 1 5'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 89907 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIQK-CXADR TRIQK chr8 92954406 - CXADR chr21 17547027 + Exonic hg38 GBM TCGA-41-3915-01A 1 2 5'UTR-CDS Inter-chr q22.1 q21.1 89908 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R2B-CCT3 PPP2R2B chr5 146638251 - CCT3 chr1 156325089 - Exonic hg38 GBM TCGA-41-4097-01A 35 20 In-Frame Inter-chr q32 q22 Seq+ 89909 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A26-IMMT SLC25A26 chr3 66263379 + IMMT chr2 86147833 - Exonic hg38 GBM TCGA-41-4097-01A 26 12 3'UTR-CDS Inter-chr p11.2 Seq+ 89910 ChimerSeq TCGA FAWG TCGA_RNA-Seq STIM1-MEF2D STIM1 chr11 3856409 + MEF2D chr1 156483430 - Exonic hg38 GBM TCGA-41-4097-01A 5 1 CDS-5'UTR Inter-chr p15.4 q22 Transcription factor Seq+ 89911 ChimerSeq TCGA FAWG TCGA_RNA-Seq OS9-KIF5A OS9 chr12 57696373 + KIF5A chr12 57567126 + Exonic hg38 GBM TCGA-41-5651-01A 66 45 In-Frame Intra-chr q13.3 q13.3 Seq+ 89912 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALNT1-RPS6P22 B4GALNT1 chr12 57624081 - RPS6P22 chr12 59020286 + Exonic hg38 GBM TCGA-41-5651-01A 20 6 Out-of-frame Intra-chr q13.3 89913 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSFM-INHBE TSFM chr12 57793073 + INHBE chr12 57456094 + Exonic hg38 GBM TCGA-41-5651-01A 14 10 In-Frame Intra-chr q14.1 q13.3 Seq+ 89914 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLEC16A-TXNDC11 CLEC16A chr16 10982991 + TXNDC11 chr16 11684245 - Exonic hg38 GBM TCGA-41-5651-01A 13 9 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 89915 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALNT1-TSFM B4GALNT1 chr12 57626662 - TSFM chr12 57796177 + Exonic hg38 GBM TCGA-41-5651-01A 8 5 3'UTR-CDS Intra-chr q13.3 q14.1 Seq+ 89916 ChimerSeq TCGA FAWG TCGA_RNA-Seq TDRD3-GLI1 TDRD3 chr13 60397405 + GLI1 chr12 57470317 + Exonic hg38 GBM TCGA-41-5651-01A 6 1 Out-of-frame Inter-chr q21.2 q13.3 Tumor suppressor gene Transcription factor Seq+ 89917 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEGR1-ZRANB2 NEGR1 chr1 72282319 - ZRANB2 chr1 71078708 - Exonic hg38 GBM TCGA-41-5651-01A 3 6 In-Frame Intra-chr p31.1 p31.1 Seq+ 89918 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSFM-OS9 TSFM chr12 57787162 + OS9 chr12 57716089 + Exonic hg38 GBM TCGA-41-5651-01A 2 3 Out-of-frame Intra-chr q14.1 q13.3 Seq+ 89919 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP1G1-AFG3L1P AP1G1 chr16 71738942 - AFG3L1P chr16 89984531 + Exonic hg38 GBM TCGA-4W-AA9R-01A 102 49 5'UTR-5'UTR Intra-chr q22.2 q24.3 89920 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF13-TM4SF4 RNF13 chr3 149852596 + TM4SF4 chr3 149475823 + Exonic hg38 GBM TCGA-4W-AA9R-01A 48 73 In-Frame Intra-chr q25.1 q25.1 Seq+ 89921 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0513-ANKRD11 KIAA0513 chr16 85027858 + ANKRD11 chr16 89418368 - Exonic hg38 GBM TCGA-4W-AA9R-01A 8 1 5'UTR-5'UTR Intra-chr q24.1 q24.3 89922 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNS-TSNAXIP1 GALNS chr16 88856758 - TSNAXIP1 chr16 67824583 + Exonic hg38 GBM TCGA-4W-AA9R-01A 5 4 Out-of-frame Intra-chr q24.3 q22.1 89923 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHIC2-PDGFRA CHIC2 chr4 54064182 - PDGFRA chr4 54285371 + Exonic hg38 GBM TCGA-4W-AA9R-01A 1 1 Out-of-frame Intra-chr q12 q12 Oncogene 89924 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENG-AK1 ENG chr9 127843094 - AK1 chr9 127868512 - Exonic hg38 GBM TCGA-4W-AA9S-01A 100 46 In-Frame Intra-chr q34.11 q34.11 Seq+ 89925 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC2A1-EBNA1BP2 SLC2A1 chr1 42958634 - EBNA1BP2 chr1 43215393 - Exonic hg38 GBM TCGA-4W-AA9S-01A 59 40 CDS-5'UTR Intra-chr p34.2 p34.2 89926 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARN-CACHD1 PARN chr16 14593301 - CACHD1 chr1 64550594 + Exonic hg38 GBM TCGA-4W-AA9S-01A 12 4 5'UTR-5'UTR Inter-chr p31.3 89927 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNIP4-GRK4 KCNIP4 chr4 21544390 - GRK4 chr4 3004231 + Exonic hg38 GBM TCGA-4W-AA9S-01A 5 2 5'UTR-5'UTR Intra-chr p15.2 p16.3 89928 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSRP1-EIF4G3 RSRP1 chr1 25337040 - EIF4G3 chr1 20904971 - Exonic hg38 GBM TCGA-4W-AA9S-01A 5 2 5'UTR-CDS Intra-chr p36.11 p36.12 89929 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPHB2-ASAP3 EPHB2 chr1 22865212 + ASAP3 chr1 23456194 - Exonic hg38 GBM TCGA-4W-AA9S-01A 3 3 CDS-5'UTR Intra-chr p36.12 Tumor suppressor gene 89930 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATSL2-GTF2IRD1 GATSL2 chr7 75019095 + GTF2IRD1 chr7 74508075 + Exonic hg38 GBM TCGA-4W-AA9S-01A 2 3 Out-of-frame Intra-chr q11.23 Transcription factor 89931 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP24-DHCR24 USP24 chr1 55171556 - DHCR24 chr1 54871613 - Exonic hg38 GBM TCGA-4W-AA9T-01A 28 27 In-Frame Intra-chr p32.3 p32.3 89932 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAAM1-SYNCRIP DAAM1 chr14 59291306 + SYNCRIP chr6 85619417 - Exonic hg38 GBM TCGA-4W-AA9T-01A 10 20 In-Frame Inter-chr q23.1 q14.3 89933 ChimerSeq TCGA FAWG TCGA_RNA-Seq FUT8-PCNX1 FUT8 chr14 65455718 + PCNX1 chr14 70946915 + Exonic hg38 GBM TCGA-4W-AA9T-01A 2 2 5'UTR-CDS Intra-chr q23.3 q24.2 89934 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAG2-PAK3 STAG2 chrX 124057977 + PAK3 chrX 111013828 + Exonic hg38 GBM TCGA-76-4926-01B 20 18 CDS-5'UTR Intra-chr q25 Oncogene q23 STE:STE20 Oncogene Seq+ 89935 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEMIP-ZYX CEMIP chr15 80932039 + ZYX chr7 143388219 + Exonic hg38 GBM TCGA-76-4926-01B 11 9 CDS-3'UTR Inter-chr q25.1 q34 Tumor suppressor gene 89936 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACAP3-DVL1 ACAP3 chr1 1307769 - DVL1 chr1 1342758 - Exonic hg38 GBM TCGA-76-4926-01B 6 0 In-Frame Intra-chr p36.33 p36.33 Seq+ 89937 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB40C-PRR35 RAB40C chr16 590433 + PRR35 chr16 563256 + Exonic hg38 GBM TCGA-76-4926-01B 3 7 CDS-5'UTR Intra-chr p13.3 p13.3 89938 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMPR1A-LIPA BMPR1A chr10 86756919 + LIPA chr10 89247649 - Exonic hg38 GBM TCGA-76-4926-01B 3 4 5'UTR-5'UTR Intra-chr q23.2 TKL:STKR Oncogene Tumor suppressor gene q23.31 Seq+ 89939 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCA1-PGRMC1 SMARCA1 chrX 129465520 - PGRMC1 chrX 119240309 + Exonic hg38 GBM TCGA-76-4926-01B 3 1 Out-of-frame Intra-chr q26.1 q24 Seq+ 89940 ChimerSeq TCGA FAWG TCGA_RNA-Seq JMJD1C-NRBF2 JMJD1C chr10 63264651 - NRBF2 chr10 63146209 + Exonic hg38 GBM TCGA-76-4929-01A 15 5 In-Frame Intra-chr q21.3 q21.3 Seq+ 89941 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPLD1-TDP2 GPLD1 chr6 24433187 - TDP2 chr6 24651069 - Exonic hg38 GBM TCGA-76-4929-01A 7 5 In-Frame Intra-chr p22.3 p22.3 Seq+ 89942 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPNE2-HS1BP3 CPNE2 chr16 57092790 + HS1BP3 chr2 20560515 - Exonic hg38 GBM TCGA-76-4929-01A 6 3 5'UTR-3'UTR Inter-chr q13 p24.1 89943 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF532-GMPR ZNF532 chr18 58953799 + GMPR chr6 16246842 + Exonic hg38 GBM TCGA-76-4929-01A 4 0 In-Frame Inter-chr q21.32 Transcription factor p22.3 Seq+ 89944 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD7-HS1BP3 STARD7 chr2 96187217 - HS1BP3 chr2 20624892 - Exonic hg38 GBM TCGA-76-4931-01A 3 2 Out-of-frame Intra-chr q11.2 p24.1 Seq+ 89945 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHI3L1-PTPRZ1 CHI3L1 chr1 203184576 - PTPRZ1 chr7 122028552 + Exonic hg38 GBM TCGA-76-4931-01A 2 0 5'UTR-CDS Inter-chr q32.1 q31.32 Seq+ 89946 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM200B-KHDRBS1 TMEM200B chr1 29123856 - KHDRBS1 chr1 32060163 + Exonic hg38 GBM TCGA-76-4932-01A 2 2 5'UTR-5'UTR Intra-chr p35.3 p35.2 Seq+ 89947 ChimerSeq TCGA FAWG TCGA_RNA-Seq SF3B3-RXRA SF3B3 chr16 70564050 + RXRA chr9 134401632 + Exonic hg38 GBM TCGA-OX-A56R-01A 7 11 Out-of-frame Inter-chr q22.1 q34.2 Transcription factor 89948 ChimerSeq TCGA FAWG TCGA_RNA-Seq STON2-SEL1L STON2 chr14 81370988 - SEL1L chr14 81506241 - Exonic hg38 GBM TCGA-OX-A56R-01A 4 2 In-Frame Intra-chr q31.1 q31.1 89949 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF19-PARK2 ZNF19 chr16 71494954 - PARK2 chr6 162443473 - Exonic hg38 GBM TCGA-OX-A56R-01A 1 2 Out-of-frame Inter-chr q22.2 Transcription factor Tumor suppressor gene 89950 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP23-MBD6 ATP23 chr12 57950615 + MBD6 chr12 57524264 + Exonic hg38 GBM TCGA-RR-A6KA-01A 13 44 Out-of-frame Intra-chr q13.3 Transcription factor 89951 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS11-PRAMEF2 INTS11 chr1 1324581 - PRAMEF2 chr1 12858985 + Exonic hg38 GBM TCGA-RR-A6KA-01A 15 1 CDS-3'UTR Intra-chr p36.33 89952 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAZAP1-HIVEP3 DAZAP1 chr19 1430362 + HIVEP3 chr1 41628947 - Exonic hg38 GBM TCGA-RR-A6KA-01A 1 1 CDS-5'UTR Inter-chr p13.3 p34.2 Tumor suppressor gene Transcription factor 89953 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNT1-TUBA1C CCNT1 chr12 48698138 - TUBA1C chr12 49272253 + Exonic hg38 GBM TCGA-RR-A6KB-01A 4 4 Out-of-frame Intra-chr q13.12 q13.12 89954 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC6B-CPQ EXOC6B chr2 72718103 - CPQ chr8 96879798 + Exonic hg38 GBM TCGA-RR-A6KB-01A 3 0 Out-of-frame Inter-chr p13.2 q22.1 89955 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC17-CSRP2 ZDHHC17 chr12 76764329 + CSRP2 chr12 76866261 - Exonic hg38 GBM TCGA-RR-A6KB-01A 2 1 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 89956 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAV3-ARHGAP9 NAV3 chr12 78059115 + ARHGAP9 chr12 57479424 - Exonic hg38 GBM TCGA-RR-A6KB-01A 1 1 CDS-5'UTR Intra-chr q21.2 q13.3 89957 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD12-SEC24B PSMD12 chr17 67366412 - SEC24B chr4 109506331 + Exonic hg38 GBM TCGA-RR-A6KC-01A 2 0 In-Frame Inter-chr q24.2 q25 89958 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUFU-ADK SUFU chr10 102550106 + ADK chr10 74708321 + Exonic hg38 HNSC TCGA-4P-AA8J-01A 19 38 In-Frame Intra-chr q24.32 Oncogene Tumor suppressor gene q22.2 Seq+ 89959 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMPD4P1-MED15 SMPD4P1 chr22 20626096 - MED15 chr22 20582611 + Exonic hg38 HNSC TCGA-4P-AA8J-01A 9 54 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 89960 ChimerSeq TCGA FAWG TCGA_RNA-Seq MMS19-MICU1 MMS19 chr10 97498273 - MICU1 chr10 72566794 - Exonic hg38 HNSC TCGA-4P-AA8J-01A 2 8 5'UTR-5'UTR Intra-chr q24.1 q22.1 Seq+ 89961 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1B-STAT4 MYO1B chr2 191245626 + STAT4 chr2 191148204 - Exonic hg38 HNSC TCGA-BA-4075-01A 55 68 5'UTR-5'UTR Intra-chr q32.3 q32.3 Transcription factor Seq+ 89962 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA3-TTC39C LAMA3 chr18 23949924 + TTC39C chr18 24064140 + Exonic hg38 HNSC TCGA-BA-4075-01A 2 16 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 89963 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRK5-PDZD8 GRK5 chr10 119396772 + PDZD8 chr10 117318974 - Exonic hg38 HNSC TCGA-BA-4075-01A 1 6 Out-of-frame Intra-chr q26.11 q26.11 Seq+ 89964 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1328-SUPT3H KIAA1328 chr18 36835376 + SUPT3H chr6 44829857 - Exonic hg38 HNSC TCGA-BA-4075-01A 1 3 In-Frame Inter-chr q12.2 p21.1 89965 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCCB-EPHB1 PCCB chr3 136250558 + EPHB1 chr3 135106448 + Exonic hg38 HNSC TCGA-BA-4075-01A 1 2 Out-of-frame Intra-chr q22.3 q22.2 Oncogene 89966 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHACTR2-PLAGL1 PHACTR2 chr6 143678209 + PLAGL1 chr6 143968978 - Exonic hg38 HNSC TCGA-BA-4076-01A 3 30 CDS-5'UTR Intra-chr q24.2 q24.2 Tumor suppressor gene Transcription factor Seq+ 89967 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR36-NREP WDR36 chr5 111092618 + NREP chr5 111735507 - Exonic hg38 HNSC TCGA-BA-4077-01B 2 43 In-Frame Intra-chr q22.1 q22.1 Seq+ 89968 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSMCE2-PACRG NSMCE2 chr8 125102487 + PACRG chr6 162814147 + Exonic hg38 HNSC TCGA-BA-4077-01B 1 13 Out-of-frame Inter-chr q24.13 q26 Tumor suppressor gene Seq+ 89969 ChimerSeq TCGA FAWG TCGA_RNA-Seq IRF6-C1orf21 IRF6 chr1 209796348 - C1orf21 chr1 184619518 + Exonic hg38 HNSC TCGA-BA-4077-01B 3 3 Out-of-frame Intra-chr q32.2 Transcription factor q25.3 Seq+ 89970 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDLIM1-SORBS1 PDLIM1 chr10 95290820 - SORBS1 chr10 95315126 - Exonic hg38 HNSC TCGA-BA-4077-01B 1 2 Out-of-frame Intra-chr q23.33 q24.1 Seq+ 89971 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC2A12-SGK1 SLC2A12 chr6 134052378 - SGK1 chr6 134262148 - Exonic hg38 HNSC TCGA-BA-4078-01A 20 61 Out-of-frame Intra-chr q23.2 q23.2 AGC:SGK Oncogene Seq+ 89972 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTK7-ANKS1A PTK7 chr6 43076567 + ANKS1A chr6 34967239 + Exonic hg38 HNSC TCGA-BA-4078-01A 5 38 Out-of-frame Intra-chr p21.1 p21.31 Seq+ 89973 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF6B-CMAHP ATF6B chr6 32116480 - CMAHP chr6 25115100 - Exonic hg38 HNSC TCGA-BA-4078-01A 3 33 5'UTR-3'UTR Intra-chr Transcription factor p22.3 Seq+ 89974 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKS1A-DCDC2 ANKS1A chr6 34889599 + DCDC2 chr6 24353623 - Exonic hg38 HNSC TCGA-BA-4078-01A 5 2 In-Frame Intra-chr p21.31 p22.3 Tumor suppressor gene 89975 ChimerSeq TCGA FAWG TCGA_RNA-Seq POFUT1-FDFT1 POFUT1 chr20 32208065 + FDFT1 chr8 11831518 + Exonic hg38 HNSC TCGA-BA-4078-01A 1 1 CDS-5'UTR Inter-chr q11.21 p23.1 89976 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKDC-SPIDR PRKDC chr8 47927194 - SPIDR chr8 47595811 + Exonic hg38 HNSC TCGA-BA-4078-01A 1 1 Out-of-frame Intra-chr q11.21 Oncogene q11.21 89977 ChimerSeq TCGA FAWG TCGA_RNA-Seq STIM2-TBC1D19 STIM2 chr4 26861369 + TBC1D19 chr4 26720081 + Exonic hg38 HNSC TCGA-BA-5151-01A 1 3 In-Frame Intra-chr p15.2 p15.2 89978 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBMS2-NACA RBMS2 chr12 56586926 + NACA chr12 56713190 - Exonic hg38 HNSC TCGA-BA-5152-01A 2 1 In-Frame Intra-chr q13.3 q13.3 89979 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIO-PPP2R5E TRIO chr5 14280436 + PPP2R5E chr14 63382157 - Exonic hg38 HNSC TCGA-BA-5153-01A 12 78 In-Frame Inter-chr p15.2 q23.2 Seq+ 89980 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARIH2-TRIO ARIH2 chr3 48918998 + TRIO chr5 14286871 + Exonic hg38 HNSC TCGA-BA-5153-01A 1 9 5'UTR-5'UTR Inter-chr p21.31 p15.2 Seq+ 89981 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFRC-JUP TFRC chr3 196082043 - JUP chr17 41771862 - Exonic hg38 HNSC TCGA-BA-5557-01A 1 1 5'UTR-5'UTR Inter-chr q29 q21.2 Tumor suppressor gene 89982 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRAMD2-PKM GRAMD2 chr15 72197731 - PKM chr15 72202620 - Exonic hg38 HNSC TCGA-BA-5558-01A 10 29 Out-of-frame Intra-chr q23 q23 Seq+ 89983 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMD12-SAMHD1 SAMD12 chr8 118580715 - SAMHD1 chr20 36916830 - Exonic hg38 HNSC TCGA-BA-5559-01A 21 76 Out-of-frame Inter-chr q24.12 q11.23 Seq+ 89984 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMHD1-YIF1B SAMHD1 chr20 36919364 - YIF1B chr19 38305507 - Exonic hg38 HNSC TCGA-BA-5559-01A 12 57 In-Frame Inter-chr q11.23 q13.2 Seq+ 89985 ChimerSeq TCGA FAWG TCGA_RNA-Seq YIF1B-SAMD12 YIF1B chr19 38309405 - SAMD12 chr8 118439961 - Exonic hg38 HNSC TCGA-BA-5559-01A 2 6 In-Frame Inter-chr q13.2 q24.12 89986 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMB1-PUS7 LAMB1 chr7 107986022 - PUS7 chr7 105457926 - Exonic hg38 HNSC TCGA-BA-6868-01B 86 384 In-Frame Intra-chr q31.1 q22.3 Seq+ 89987 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAMDC2-MRPS28 MAMDC2 chr9 70131612 + MRPS28 chr8 79919148 - Exonic hg38 HNSC TCGA-BA-6868-01B 58 165 3'UTR-CDS Inter-chr q21.12 q21.13 Seq+ 89988 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELAVL1-LYPLA2P2 ELAVL1 chr19 7991644 - LYPLA2P2 chr19 7879940 - Exonic hg38 HNSC TCGA-BA-6868-01B 12 28 CDS-3'UTR Intra-chr p13.2 p13.2 89989 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGMS1-GRID1 SGMS1 chr10 50466890 - GRID1 chr10 85916239 - Exonic hg38 HNSC TCGA-BA-6868-01B 3 23 5'UTR-CDS Intra-chr q11.23 Tumor suppressor gene q23.2 Seq+ 89990 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS28-MAMDC2 MRPS28 chr8 80002999 - MAMDC2 chr9 70108211 + Exonic hg38 HNSC TCGA-BA-6868-01B 3 4 CDS-3'UTR Inter-chr q21.13 q21.12 89991 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELAVL1-PRR36 ELAVL1 chr19 7973807 - PRR36 chr19 7873617 - Exonic hg38 HNSC TCGA-BA-6868-01B 1000 1000 Out-of-frame Intra-chr p13.2 p13.2 89992 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEMT-RAI1 PEMT chr17 17576920 - RAI1 chr17 17724028 + Exonic hg38 HNSC TCGA-BA-6869-01A 4 31 CDS-5'UTR Intra-chr p11.2 p11.2 Seq+ 89993 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAI1-PEMT RAI1 chr17 17724159 + PEMT chr17 17577027 - Exonic hg38 HNSC TCGA-BA-6869-01A 5 26 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 89994 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDLIM1-TNRC6A PDLIM1 chr10 95263864 - TNRC6A chr16 24789232 + Exonic hg38 HNSC TCGA-BA-6869-01A 1 7 Out-of-frame Inter-chr q23.33 p12.1 89995 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGD-CLSTN1 PGD chr1 10399704 + CLSTN1 chr1 9730705 - Exonic hg38 HNSC TCGA-BA-6869-01A 1 1 In-Frame Intra-chr p36.22 p36.22 89996 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUAK2-LEMD1 NUAK2 chr1 205311705 - LEMD1 chr1 205420574 - Exonic hg38 HNSC TCGA-BA-6871-01A 39 157 CDS-5'UTR Intra-chr q32.1 q32.1 Seq+ 89997 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAIAP2-TBCD BAIAP2 chr17 81086580 + TBCD chr17 82889668 + Exonic hg38 HNSC TCGA-BA-6871-01A 38 148 CDS-5'UTR Intra-chr q25.3 Seq+ 89998 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCNN1A-DCP1B SCNN1A chr12 6348727 - DCP1B chr12 1946286 - Exonic hg38 HNSC TCGA-BA-6871-01A 8 78 CDS-5'UTR Intra-chr p13.31 p13.33 Seq+ 89999 ChimerSeq TCGA FAWG TCGA_RNA-Seq NR4A1-IL20RB NR4A1 chr12 52041929 + IL20RB chr3 136980466 + Exonic hg38 HNSC TCGA-BA-6871-01A 9 17 In-Frame Inter-chr q13.13 Tumor suppressor gene Transcription factor q22.3 Seq+ 90000 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF76-ANKS1A ZNF76 chr6 35259727 + ANKS1A chr6 35017473 + Exonic hg38 HNSC TCGA-BA-6871-01A 1 9 5'UTR-CDS Intra-chr p21.31 Transcription factor p21.31 Seq+ 90001 ChimerSeq TCGA FAWG TCGA_RNA-Seq SELENOW-EHD2 SELENOW chr19 47778814 + EHD2 chr19 47740881 + Exonic hg38 HNSC TCGA-BA-6872-01A 21 92 Out-of-frame Intra-chr q13.33 q13.33 90002 ChimerSeq TCGA FAWG TCGA_RNA-Seq LYPD1-NCKAP5 LYPD1 chr2 132668400 - NCKAP5 chr2 132732051 - Exonic hg38 HNSC TCGA-BA-6872-01A 3 11 In-Frame Intra-chr q21.2 q21.2 Seq+ 90003 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGFR-DYM EGFR chr7 55019365 + DYM chr18 49391645 - Exonic hg38 HNSC TCGA-BA-6872-01A 1 14 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.1 Seq+ 90004 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIPK3-AS HIPK3 chr11 33257889 + AS chr11 32452021 + Exonic hg38 HNSC TCGA-BA-6872-01A 1 5 Out-of-frame Intra-chr p13 CMGC:DYRK 90005 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDH1A3-IGF1R ALDH1A3 chr15 100887712 + IGF1R chr15 98891325 + Exonic hg38 HNSC TCGA-BA-6873-01A 1 3 Out-of-frame Intra-chr q26.3 q26.3 TK:InsR Oncogene 90006 ChimerSeq TCGA FAWG TCGA_RNA-Seq LTBP3-CERS3 LTBP3 chr11 65553701 - CERS3 chr15 100402865 - Exonic hg38 HNSC TCGA-BA-6873-01A 1 3 In-Frame Inter-chr q13.1 q26.3 Seq+ 90007 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXN2-PLB1 FOXN2 chr2 48314814 + PLB1 chr2 28640927 + Exonic hg38 HNSC TCGA-BA-7269-01A 30 79 5'UTR-5'UTR Intra-chr p16.3 Transcription factor p23.2 Seq+ 90008 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK2-BPIFA2 MARK2 chr11 63839560 + BPIFA2 chr20 33178147 + Exonic hg38 HNSC TCGA-BA-7269-01A 12 36 Out-of-frame Inter-chr q13.1 CAMK:CAMKL q11.21 Seq+ 90009 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK1-PARD6G TAOK1 chr17 29467216 + PARD6G chr18 80183150 - Exonic hg38 HNSC TCGA-BA-7269-01A 6 12 Out-of-frame Inter-chr q11.2 q23 Seq+ 90010 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2K2-PSMD9 MAP2K2 chr19 4110509 - PSMD9 chr12 121915856 + Exonic hg38 HNSC TCGA-BA-A4IG-01A 40 296 In-Frame Inter-chr p13.3 STE:STE7 Oncogene q24.31 Seq+ 90011 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNS4-CCR7 TNS4 chr17 40487036 - CCR7 chr17 40555818 - Exonic hg38 HNSC TCGA-BA-A4IG-01A 1 7 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 90012 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMTM4-SULT1E1 CMTM4 chr16 66696340 - SULT1E1 chr4 69857653 - Exonic hg38 HNSC TCGA-BA-A4IG-01A 2 2 CDS-5'UTR Inter-chr q22.1 q13.3 90013 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSE1-EMC8 GSE1 chr16 85613398 + EMC8 chr16 85789050 - Exonic hg38 HNSC TCGA-BA-A4II-01A 23 113 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 90014 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK2-C11orf84 MARK2 chr11 63900678 + C11orf84 chr11 63826928 + Exonic hg38 HNSC TCGA-BA-A4II-01A 6 90 Out-of-frame Intra-chr q13.1 CAMK:CAMKL q13.1 Seq+ 90015 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP9-ANKIB1 AKAP9 chr7 91941147 + ANKIB1 chr7 92294889 + Exonic hg38 HNSC TCGA-BA-A4II-01A 3 10 CDS-5'UTR Intra-chr q21.2 Oncogene q21.2 Seq+ 90016 ChimerSeq TCGA FAWG TCGA_RNA-Seq WRAP53-MPDU1 WRAP53 chr17 7686078 + MPDU1 chr17 7591851 + Exonic hg38 HNSC TCGA-BA-A4II-01A 3 6 Out-of-frame Intra-chr p13.1 p13.1 90017 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHDC4-CA5A KLHDC4 chr16 87765792 - CA5A chr16 87902520 - Exonic hg38 HNSC TCGA-BA-A4II-01A 2 9 In-Frame Intra-chr q24.2 q24.2 Seq+ 90018 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOP2A-TLK2 TOP2A chr17 40416740 - TLK2 chr17 62560016 + Exonic hg38 HNSC TCGA-BA-A4II-01A 1 2 In-Frame Intra-chr q21.2 q23.2 Other:TLK 90019 ChimerSeq TCGA FAWG TCGA_RNA-Seq DEDD-UFC1 DEDD chr1 161130815 - UFC1 chr1 161153926 + Exonic hg38 HNSC TCGA-BA-A6D8-01A 13 39 5'UTR-5'UTR Intra-chr q23.3 q23.3 Seq+ 90020 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCNX1-TTLL5 PCNX1 chr14 71103669 + TTLL5 chr14 75954424 + Exonic hg38 HNSC TCGA-BA-A6D8-01A 6 17 Out-of-frame Intra-chr q24.2 q24.3 90021 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLG1-TMEM44 DLG1 chr3 197282679 - TMEM44 chr3 194623695 - Exonic hg38 HNSC TCGA-BA-A6DB-01A 1 3 Out-of-frame Intra-chr q29 Tumor suppressor gene q29 Seq+ 90022 ChimerSeq TCGA FAWG TCGA_RNA-Seq C18orf8-PSPC1 C18orf8 chr18 23509279 + PSPC1 chr13 19772543 - Exonic hg38 HNSC TCGA-BA-A6DE-01A 16 121 Out-of-frame Inter-chr q11.2 q12.11 Seq+ 90023 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2-ICA1L MAP2 chr2 209424276 + ICA1L chr2 202816009 - Exonic hg38 HNSC TCGA-BA-A6DE-01A 9 45 5'UTR-CDS Intra-chr q34 q33.2 Seq+ 90024 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE4B-PEX14 UBE4B chr1 10033694 + PEX14 chr1 10536213 + Exonic hg38 HNSC TCGA-BA-A6DJ-01A 12 43 In-Frame Intra-chr p36.22 Tumor suppressor gene p36.22 Seq+ 90025 ChimerSeq TCGA FAWG TCGA_RNA-Seq VMP1-TUBD1 VMP1 chr17 59817773 + TUBD1 chr17 59878334 - Exonic hg38 HNSC TCGA-BA-A6DJ-01A 5 21 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 90026 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARL-ABCC5 PARL chr3 183884722 - ABCC5 chr3 184014447 - Exonic hg38 HNSC TCGA-BA-A6DL-01A 6 13 CDS-5'UTR Intra-chr q27.1 q27.1 Seq+ 90027 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLTA-GNE CLTA chr9 36204179 + GNE chr9 36249397 - Exonic hg38 HNSC TCGA-BA-A6DL-01A 1 6 Out-of-frame Intra-chr p13.3 p13.3 90028 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPSAP2-PLLP PRPSAP2 chr17 18867334 + PLLP chr16 57258584 - Exonic hg38 HNSC TCGA-BA-A8YP-01A 16 33 Out-of-frame Inter-chr p11.2 q13 Seq+ 90029 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRIP1-GDPD1 NRIP1 chr21 15064745 - GDPD1 chr17 59245414 + Exonic hg38 HNSC TCGA-BA-A8YP-01A 11 29 5'UTR-CDS Inter-chr q21.1 q22 Seq+ 90030 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFR-PLEKHG4B ZFR chr5 32379115 - PLEKHG4B chr5 181514 + Exonic hg38 HNSC TCGA-BA-A8YP-01A 6 17 Out-of-frame Intra-chr p13.3 p15.33 Seq+ 90031 ChimerSeq TCGA FAWG TCGA_RNA-Seq KBTBD2-PDE1C KBTBD2 chr7 32891536 - PDE1C chr7 32169956 - Exonic hg38 HNSC TCGA-BA-A8YP-01A 5 8 5'UTR-CDS Intra-chr p14.3 p14.3 Seq+ 90032 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM6A-DLL1 KDM6A chrX 44974715 + DLL1 chr6 170286298 - Exonic hg38 HNSC TCGA-BA-A8YP-01A 4 10 5'UTR-5'UTR Inter-chr p11.3 Oncogene Tumor suppressor gene Seq+ 90033 ChimerSeq TCGA FAWG TCGA_RNA-Seq DANCR-GTF3C3 DANCR chr4 52712959 + GTF3C3 chr2 196770039 - Exonic hg38 HNSC TCGA-BA-A8YP-01A 5 5 5'UTR-CDS Inter-chr q12 q33.1 Seq+ 90034 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSF1-TENM4 RSF1 chr11 77820528 - TENM4 chr11 78738570 - Exonic hg38 HNSC TCGA-BA-A8YP-01A 3 5 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 90035 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBD1-INPP5D TUBD1 chr17 59886083 - INPP5D chr2 233182410 + Exonic hg38 HNSC TCGA-BB-4217-01A 5 14 CDS-3'UTR Inter-chr q23.1 Seq+ 90036 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAN3-NTRK2 PAN3 chr13 28139087 + NTRK2 chr9 84934162 + Exonic hg38 HNSC TCGA-BB-4223-01A 7 5 In-Frame Inter-chr q12.2 q21.33 Oncogene Seq+ 90037 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM69A-LRRC8D FAM69A chr1 92961376 - LRRC8D chr1 89843638 + Exonic hg38 HNSC TCGA-BB-4223-01A 4 11 Out-of-frame Intra-chr p22.1 p22.2 Seq+ 90038 ChimerSeq TCGA FAWG TCGA_RNA-Seq OBSCN-CASZ1 OBSCN chr1 228224734 + CASZ1 chr1 10665571 - Exonic hg38 HNSC TCGA-BB-4223-01A 3 15 In-Frame Intra-chr q42.13 p36.22 Transcription factor Seq+ 90039 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP11B-NAALADL2 ATP11B chr3 182869331 + NAALADL2 chr3 175655481 + Exonic hg38 HNSC TCGA-BB-4223-01A 3 10 Out-of-frame Intra-chr q26.33 Oncogene q26.31 Seq+ 90040 ChimerSeq TCGA FAWG TCGA_RNA-Seq PACS2-DIO3OS PACS2 chr14 105353733 + DIO3OS chr14 101552757 - Exonic hg38 HNSC TCGA-BB-4224-01A 16 59 Out-of-frame Intra-chr q32.33 q32.31 Seq+ 90041 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH1-SDCCAG3 NOTCH1 chr9 136544024 - SDCCAG3 chr9 136407938 - Exonic hg38 HNSC TCGA-BB-4224-01A 10 37 Out-of-frame Intra-chr q34.3 Oncogene Tumor suppressor gene q34.3 Seq+ 90042 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF7-ATP5G2 ATF7 chr12 53626280 - ATP5G2 chr12 53676660 - Exonic hg38 HNSC TCGA-BB-4224-01A 9 33 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 Seq+ 90043 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNQ1-METTL15 KCNQ1 chr11 2445484 + METTL15 chr11 28526475 + Exonic hg38 HNSC TCGA-BB-4225-01A 10 52 3'UTR-3'UTR Intra-chr p15.5 p14.1 90044 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSI2-UTP18 MSI2 chr17 57401471 + UTP18 chr17 51296965 + Exonic hg38 HNSC TCGA-BB-4227-01A 11 65 Out-of-frame Intra-chr q22 q21.33 Seq+ 90045 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLS-MYO1B GLS chr2 190924593 + MYO1B chr2 191276887 + Exonic hg38 HNSC TCGA-BB-4227-01A 12 60 CDS-5'UTR Intra-chr q32.2 Tumor suppressor gene q32.3 Seq+ 90046 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAP2B-ANAPC16 RAP2B chr3 153163057 + ANAPC16 chr10 72230366 + Exonic hg38 HNSC TCGA-BB-4227-01A 7 27 In-Frame Inter-chr q25.2 q22.1 Seq+ 90047 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAP2B-ASCC1 RAP2B chr3 153163577 + ASCC1 chr10 72216072 - Exonic hg38 HNSC TCGA-BB-4227-01A 6 16 Out-of-frame Inter-chr q25.2 q22.1 Seq+ 90048 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTLL11-NDUFA8 TTLL11 chr9 122039272 - NDUFA8 chr9 122148277 - Exonic hg38 HNSC TCGA-BB-4227-01A 2 16 Out-of-frame Intra-chr q33.2 q33.2 Seq+ 90049 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM1-KIAA1211 PUM1 chr1 30992390 - KIAA1211 chr4 56323377 + Exonic hg38 HNSC TCGA-BB-7861-01A 7 14 Out-of-frame Inter-chr p35.2 q12 Seq+ 90050 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMLHE-NEDD9 TMLHE chrX 155513986 - NEDD9 chr6 11193692 - Exonic hg38 HNSC TCGA-BB-7861-01A 2 8 Out-of-frame Inter-chr q28 p24.2 Seq+ 90051 ChimerSeq TCGA FAWG TCGA_RNA-Seq HERC4-CTNNA3 HERC4 chr10 67990211 - CTNNA3 chr10 65920617 - Exonic hg38 HNSC TCGA-BB-7861-01A 1 9 Out-of-frame Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 90052 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2S2-NCOA6 EIF2S2 chr20 34098498 - NCOA6 chr20 34743341 - Exonic hg38 HNSC TCGA-BB-7866-01A 11 29 In-Frame Intra-chr q11.22 q11.22 Seq+ 90053 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF4-STX16 TAF4 chr20 61997550 - STX16 chr20 58667490 + Exonic hg38 HNSC TCGA-BB-7866-01A 2 42 5'UTR-5'UTR Intra-chr q13.32 Seq+ 90054 ChimerSeq TCGA FAWG TCGA_RNA-Seq XRN1-GK5 XRN1 chr3 142347234 - GK5 chr3 142215692 - Exonic hg38 HNSC TCGA-BB-7866-01A 1 4 Out-of-frame Intra-chr q23 q23 90055 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLH-EZR POLH chr6 43615525 + EZR chr6 158766444 - Exonic hg38 HNSC TCGA-BB-7871-01A 5 16 Out-of-frame Intra-chr p21.1 q25.3 Seq+ 90056 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADK-TAF1D ADK chr10 74224591 + TAF1D chr11 93732291 - Exonic hg38 HNSC TCGA-BB-7871-01A 2 4 CDS-3'UTR Inter-chr q22.2 q21 90057 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBBP8-TAF4B RBBP8 chr18 22936960 + TAF4B chr18 26265170 + Exonic hg38 HNSC TCGA-BB-7872-01A 7 32 In-Frame Intra-chr q11.2 Tumor suppressor gene q11.2 Seq+ 90058 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53TG1-ABCB1 TP53TG1 chr7 87341523 - ABCB1 chr7 87553932 - Exonic hg38 HNSC TCGA-BB-7872-01A 6 21 3'UTR-CDS Intra-chr q21.12 q21.12 Seq+ 90059 ChimerSeq TCGA FAWG TCGA_RNA-Seq SF1-HRASLS2 SF1 chr11 64766900 - HRASLS2 chr11 63558660 - Exonic hg38 HNSC TCGA-BB-8596-01A 25 164 Out-of-frame Intra-chr q13.1 q12.3 Tumor suppressor gene Seq+ 90060 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTX2-ZP3 DTX2 chr7 76463709 + ZP3 chr7 76425052 + Exonic hg38 HNSC TCGA-BB-A5HY-01A 29 342 3'UTR-5'UTR Intra-chr q11.23 Seq+ 90061 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIN3A-SNUPN SIN3A chr15 75451423 - SNUPN chr15 75621056 - Exonic hg38 HNSC TCGA-BB-A5HY-01A 15 36 5'UTR-5'UTR Intra-chr q24.2 q24.2 Seq+ 90062 ChimerSeq TCGA FAWG TCGA_RNA-Seq BDP1-PMCHL2 BDP1 chr5 71483896 + PMCHL2 chr5 71377506 + Exonic hg38 HNSC TCGA-BB-A5HY-01A 9 47 3'UTR-3'UTR Intra-chr 90063 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A17-DMC1 SLC25A17 chr22 40799023 - DMC1 chr22 38569390 - Exonic hg38 HNSC TCGA-BB-A5HY-01A 1 7 3'UTR-3'UTR Intra-chr q13.2 q13.1 90064 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIN-SAV1 NIN chr14 50770388 - SAV1 chr14 50665619 - Exonic hg38 HNSC TCGA-BB-A5HY-01A 1 3 Out-of-frame Intra-chr q22.1 Oncogene q22.1 90065 ChimerSeq TCGA FAWG TCGA_RNA-Seq AK3-IL33 AK3 chr9 4740937 - IL33 chr9 6241684 + Exonic hg38 HNSC TCGA-C9-A47Z-01A 8 197 CDS-5'UTR Intra-chr p24.1 p24.1 Seq+ 90066 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDRG3-CPLX1 NDRG3 chr20 36746045 - CPLX1 chr4 792608 - Exonic hg38 HNSC TCGA-C9-A47Z-01A 5 9 5'UTR-CDS Inter-chr q11.23 p16.3 Seq+ 90067 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM1-LCN2 DNM1 chr9 128203631 + LCN2 chr9 128151638 + Exonic hg38 HNSC TCGA-CN-4723-01A 35 120 In-Frame Intra-chr q34.11 q34.11 Seq+ 90068 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0319L-DLGAP3 KIAA0319L chr1 35554350 - DLGAP3 chr1 34869089 - Exonic hg38 HNSC TCGA-CN-4723-01A 6 79 Out-of-frame Intra-chr p34.3 p34.3 Seq+ 90069 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNA2D1-NAALADL2 CACNA2D1 chr7 82335135 - NAALADL2 chr3 175737306 + Exonic hg38 HNSC TCGA-CN-4723-01A 11 15 In-Frame Inter-chr q21.11 q26.31 Seq+ 90070 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLAIN2-CWH43 SLAIN2 chr4 48383784 + CWH43 chr4 49003735 + Exonic hg38 HNSC TCGA-CN-4725-01A 20 173 In-Frame Intra-chr p11 p11 Seq+ 90071 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF236-ZNF627 ZNF236 chr18 76881512 + ZNF627 chr19 11614527 + Exonic hg38 HNSC TCGA-CN-4725-01A 2 4 Out-of-frame Inter-chr q23 Transcription factor p13.2 Transcription factor Seq+ 90072 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSG1-DSP DSG1 chr18 31331867 + DSP chr6 7567781 + Exonic hg38 HNSC TCGA-CN-4726-01A 1 7 In-Frame Inter-chr q12.1 p24.3 Tumor suppressor gene 90073 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHMP5-SPINK4 CHMP5 chr9 33276564 + SPINK4 chr9 33245112 + Exonic hg38 HNSC TCGA-CN-4726-01A 1 2 In-Frame Intra-chr p13.3 p13.3 90074 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R9B-COL1A1 PPP1R9B chr17 50149143 - COL1A1 chr17 50192850 - Exonic hg38 HNSC TCGA-CN-4726-01A 1 2 In-Frame Intra-chr q21.33 q21.33 Oncogene 90075 ChimerSeq TCGA FAWG TCGA_RNA-Seq NLGN4Y-VAMP7 NLGN4Y chrY 14622591 + VAMP7 chrY 57126221 + Exonic hg38 HNSC TCGA-CN-4728-01A 2 3 In-Frame Intra-chr q11.221 q28 Seq+ 90076 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSC22D1-LETM1 TSC22D1 chr13 44573163 - LETM1 chr4 1825683 - Exonic hg38 HNSC TCGA-CN-4728-01A 1 5 Out-of-frame Inter-chr q14.11 Tumor suppressor gene Transcription factor p16.3 Seq+ 90077 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD3-OAZ1 STARD3 chr17 39658522 + OAZ1 chr19 2271782 + Exonic hg38 HNSC TCGA-CN-4730-01A 1 2 In-Frame Inter-chr q12 p13.3 90078 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAF1-FLT3LG SCAF1 chr19 49653705 + FLT3LG chr19 49478909 + Exonic hg38 HNSC TCGA-CN-4731-01A 14 56 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 90079 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP3CC-PIWIL2 PPP3CC chr8 22475624 + PIWIL2 chr8 22281120 + Exonic hg38 HNSC TCGA-CN-4731-01A 5 31 In-Frame Intra-chr p21.3 Tumor suppressor gene p21.3 Tumor suppressor gene Seq+ 90080 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR82-NT5DC2 WDR82 chr3 52287833 - NT5DC2 chr3 52529334 - Exonic hg38 HNSC TCGA-CN-4731-01A 5 29 5'UTR-CDS Intra-chr p21.2 p21.1 Seq+ 90081 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC3A2-GNG3 SLC3A2 chr11 62856381 + GNG3 chr11 62707700 + Exonic hg38 HNSC TCGA-CN-4731-01A 4 6 CDS-5'UTR Intra-chr q12.3 q12.3 Seq+ 90082 ChimerSeq TCGA FAWG TCGA_RNA-Seq RCL1-PLGRKT RCL1 chr9 4793227 + PLGRKT chr9 5361888 - Exonic hg38 HNSC TCGA-CN-4733-01A 11 18 Out-of-frame Intra-chr p24.1 p24.1 Seq+ 90083 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L1-TGM3 EPB41L1 chr20 36092813 + TGM3 chr20 2309657 + Exonic hg38 HNSC TCGA-CN-4733-01A 7 20 5'UTR-CDS Intra-chr q11.23 p13 Tumor suppressor gene Seq+ 90084 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC42BPB-PPP4R3A CDC42BPB chr14 103003928 - PPP4R3A chr14 91461607 - Exonic hg38 HNSC TCGA-CN-4735-01A 8 36 Out-of-frame Intra-chr q32.32 q32.12 90085 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC7B-PPP2R5C TTC7B chr14 90730075 - PPP2R5C chr14 101856686 + Exonic hg38 HNSC TCGA-CN-4735-01A 1 17 Out-of-frame Intra-chr q32.11 q32.31 Tumor suppressor gene Seq+ 90086 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSD3-ANO1 PSD3 chr8 18867674 - ANO1 chr11 70087752 + Exonic hg38 HNSC TCGA-CN-4735-01A 2 6 Out-of-frame Inter-chr p22 q13.3 Seq+ 90087 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K5-ARFIP1 MAP3K5 chr6 136791710 - ARFIP1 chr4 152872452 + Exonic hg38 HNSC TCGA-CN-4736-01A 3 17 In-Frame Inter-chr q23.3 STE:STE11 q31.3 Seq+ 90088 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRG4-QSER1 PRRG4 chr11 32830632 + QSER1 chr11 32953857 + Exonic hg38 HNSC TCGA-CN-4736-01A 1 3 In-Frame Intra-chr p13 p13 90089 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D12-HELLS TBC1D12 chr10 94442019 + HELLS chr10 94588229 + Exonic hg38 HNSC TCGA-CN-4737-01A 4 15 In-Frame Intra-chr q23.33 q23.33 Seq+ 90090 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLE3-THAP10 TLE3 chr15 70094532 - THAP10 chr15 70882908 - Exonic hg38 HNSC TCGA-CN-4738-01A 20 55 In-Frame Intra-chr q23 q23 Transcription factor Seq+ 90091 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D2-GABBR2 TBC1D2 chr9 98228952 - GABBR2 chr9 98496514 - Exonic hg38 HNSC TCGA-CN-4739-01A 2 18 In-Frame Intra-chr q22.33 q22.33 Seq+ 90092 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP25-PCNT USP25 chr21 15811210 + PCNT chr21 46421970 + Exonic hg38 HNSC TCGA-CN-4739-01A 1 3 In-Frame Intra-chr q21.1 q22.3 Seq+ 90093 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIP5K1C-MATK PIP5K1C chr19 3700297 - MATK chr19 3781672 - Exonic hg38 HNSC TCGA-CN-4741-01A 7 27 In-Frame Intra-chr p13.3 p13.3 Seq+ 90094 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCKAP1-PARD3 NCKAP1 chr2 183023806 - PARD3 chr10 34696419 - Exonic hg38 HNSC TCGA-CN-4742-01A 29 116 In-Frame Inter-chr q32.1 p11.21 Seq+ 90095 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELMSAN1-ANO1 ELMSAN1 chr14 73727458 - ANO1 chr11 70111707 + Exonic hg38 HNSC TCGA-CN-4742-01A 2 11 Out-of-frame Inter-chr q24.3 q13.3 Seq+ 90096 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLF7-ALS2 KLF7 chr2 207165467 - ALS2 chr2 201768945 - Exonic hg38 HNSC TCGA-CN-4742-01A 1 3 CDS-5'UTR Intra-chr q33.3 Transcription factor q33.1 90097 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGXB3-CAPN1 HMGXB3 chr5 150001179 + CAPN1 chr11 65204683 + Exonic hg38 HNSC TCGA-CN-5355-01A 8 60 5'UTR-5'UTR Inter-chr q32 q13.1 Seq+ 90098 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMG1P3-ME1 SMG1P3 chr16 21519828 - ME1 chr6 83352139 - Exonic hg38 HNSC TCGA-CN-5355-01A 2 16 3'UTR-CDS Inter-chr p12.2 q14.2 90099 ChimerSeq TCGA FAWG TCGA_RNA-Seq BOP1-PLEC BOP1 chr8 144276224 - PLEC chr8 143938692 - Exonic hg38 HNSC TCGA-CN-5355-01A 1 2 Out-of-frame Intra-chr q24.3 q24.3 90100 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEDD4L-CDH19 NEDD4L chr18 58165861 + CDH19 chr18 66572316 - Exonic hg38 HNSC TCGA-CN-5359-01A 2 28 5'UTR-5'UTR Intra-chr q21.31 Tumor suppressor gene q22.1 Seq+ 90101 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSFM-OS9 TSFM chr12 57793073 + OS9 chr12 57695962 + Exonic hg38 HNSC TCGA-CN-5359-01A 5 4 In-Frame Intra-chr q14.1 q13.3 Seq+ 90102 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMB1-ATXN7L1 LAMB1 chr7 107986022 - ATXN7L1 chr7 105761463 - Exonic hg38 HNSC TCGA-CN-5359-01A 2 12 In-Frame Intra-chr q31.1 q22.3 Seq+ 90103 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRPK1-OT SRPK1 chr6 35920468 - OT chr3 181563720 + Exonic hg38 HNSC TCGA-CN-5361-01A 1 19 Out-of-frame Inter-chr p21.31 CMGC:SRPK 90104 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNPEP-MICALL1 RNPEP chr1 202004496 + MICALL1 chr22 37932798 + Exonic hg38 HNSC TCGA-CN-5361-01A 1 1 Out-of-frame Inter-chr q32.1 q13.1 90105 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSF-STRADA NSF chr17 46704854 + STRADA chr17 63690597 - Exonic hg38 HNSC TCGA-CN-5363-01A 3 14 3'UTR-3'UTR Intra-chr q23.3 Tumor suppressor gene 90106 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD44-TRIM44 CD44 chr11 35139370 + TRIM44 chr11 35725924 + Exonic hg38 HNSC TCGA-CN-5363-01A 1 14 Out-of-frame Intra-chr p13 Oncogene Tumor suppressor gene p13 90107 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN1-P2RX4 PTPN1 chr20 50510590 + P2RX4 chr12 121217134 + Exonic hg38 HNSC TCGA-CN-5364-01A 11 49 Out-of-frame Inter-chr q13.13 Tumor suppressor gene q24.31 Seq+ 90108 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS12-CXXC4 INTS12 chr4 105691976 - CXXC4 chr4 104472366 - Exonic hg38 HNSC TCGA-CN-5364-01A 1 13 In-Frame Intra-chr q24 q24 Tumor suppressor gene Transcription factor Seq+ 90109 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESPN-FBLIM1 ESPN chr1 6460110 + FBLIM1 chr1 15784548 + Exonic hg38 HNSC TCGA-CN-5366-01A 1 41 In-Frame Intra-chr p36.31 p36.21 Seq+ 90110 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPT1A-KMT5B CPT1A chr11 68799218 - KMT5B chr11 68167178 - Exonic hg38 HNSC TCGA-CN-5367-01A 31 88 Out-of-frame Intra-chr q13.3 q13.2 90111 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCHSD2-GUCY1A2 FCHSD2 chr11 73140031 - GUCY1A2 chr11 106986131 - Exonic hg38 HNSC TCGA-CN-5367-01A 11 85 Out-of-frame Intra-chr q13.4 q22.3 Oncogene Seq+ 90112 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAX-RUNX2 MAX chr14 65093708 - RUNX2 chr6 45437947 + Exonic hg38 HNSC TCGA-CN-5367-01A 7 40 Out-of-frame Inter-chr q23.3 Oncogene Tumor suppressor gene Transcription factor p21.1 Tumor suppressor gene Transcription factor Seq+ 90113 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP126-YAP1 CEP126 chr11 101922760 + YAP1 chr11 102162456 + Exonic hg38 HNSC TCGA-CN-5367-01A 8 12 In-Frame Intra-chr q22.1 q22.1 Tumor suppressor gene 90114 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUNX2-MAX RUNX2 chr6 45432019 + MAX chr14 65078036 - Exonic hg38 HNSC TCGA-CN-5367-01A 3 6 Out-of-frame Inter-chr p21.1 Tumor suppressor gene Transcription factor q23.3 Oncogene Tumor suppressor gene Transcription factor Seq+ 90115 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP42-FAM168A ARHGAP42 chr11 100795166 + FAM168A chr11 73468492 - Exonic hg38 HNSC TCGA-CN-5367-01A 1 4 5'UTR-5'UTR Intra-chr q22.1 q13.4 90116 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNFSF14-GRAMD1A TNFSF14 chr19 6667113 - GRAMD1A chr19 35019191 + Exonic hg38 HNSC TCGA-CN-5369-01A 1 7 In-Frame Intra-chr p13.3 q13.11 Seq+ 90117 ChimerSeq TCGA FAWG TCGA_RNA-Seq THBS1-NRG1 THBS1 chr15 39584422 + NRG1 chr8 32727949 + Exonic hg38 HNSC TCGA-CN-5370-01A 20 71 Out-of-frame Inter-chr q14 Oncogene Tumor suppressor gene p12 Seq+ 90118 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXP1-PXDNL FOXP1 chr3 71493426 - PXDNL chr8 51499770 - Exonic hg38 HNSC TCGA-CN-5370-01A 2 10 5'UTR-CDS Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor q11.23 Seq+ 90119 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXN1-PRKDC FOXN1 chr17 28506443 + PRKDC chr8 47785317 - Exonic hg38 HNSC TCGA-CN-5370-01A 3 5 5'UTR-CDS Inter-chr q11.2 Transcription factor q11.21 Oncogene 90120 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK10-CCSER1 MAPK10 chr4 86453030 - CCSER1 chr4 90308244 + Exonic hg38 HNSC TCGA-CN-6010-01A 2 19 5'UTR-5'UTR Intra-chr q21.3 Tumor suppressor gene q22.1 Seq+ 90121 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIMELESS-GLS2 TIMELESS chr12 56437466 - GLS2 chr12 56471895 - Exonic hg38 HNSC TCGA-CN-6012-01A 10 73 Out-of-frame Intra-chr q13.3 q13.3 Tumor suppressor gene Seq+ 90122 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR2B-REST POLR2B chr4 56990898 + REST chr4 56966656 + Exonic hg38 HNSC TCGA-CN-6013-01A 23 43 CDS-3'UTR Intra-chr q12 q12 Transcription factor 90123 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFYC-CTPS1 NFYC chr1 40691867 + CTPS1 chr1 41001029 + Exonic hg38 HNSC TCGA-CN-6013-01A 3 33 5'UTR-5'UTR Intra-chr p34.2 Transcription factor p34.2 Seq+ 90124 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNNT3-COL1A1 TNNT3 chr11 1934885 + COL1A1 chr17 50197994 - Exonic hg38 HNSC TCGA-CN-6017-01A 1000 1000 Out-of-frame Inter-chr p15.5 q21.33 Oncogene 90125 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF1-AZGP1 SMURF1 chr7 99143726 - AZGP1 chr7 99972006 - Exonic hg38 HNSC TCGA-CN-6018-01A 6 31 CDS-3'UTR Intra-chr q22.1 Tumor suppressor gene Seq+ 90126 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF1-GJC3 SMURF1 chr7 99143726 - GJC3 chr7 99923603 - Exonic hg38 HNSC TCGA-CN-6018-01A 1 13 In-Frame Intra-chr q22.1 Seq+ 90127 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIRLET7BHG-SCUBE1 MIRLET7BHG chr22 46103249 + SCUBE1 chr22 43339235 - Exonic hg38 HNSC TCGA-CN-6020-01A 7 39 5'UTR-CDS Intra-chr q13.31 q13.2 Seq+ 90128 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD3-ASH2L NSD3 chr8 38304587 - ASH2L chr8 38143739 + Exonic hg38 HNSC TCGA-CN-6020-01A 1 10 CDS-3'UTR Intra-chr p11.23 Tumor suppressor gene p11.23 90129 ChimerSeq TCGA FAWG TCGA_RNA-Seq IQCH-MAP2K5 IQCH chr15 67261394 + MAP2K5 chr15 67693518 + Exonic hg38 HNSC TCGA-CN-6022-01A 1 3 In-Frame Intra-chr q23 q23 STE:STE7 Seq+ 90130 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFAF6-DPY19L4 NDUFAF6 chr8 94975415 + DPY19L4 chr8 94726331 + Exonic hg38 HNSC TCGA-CN-6023-01A 2 5 5'UTR-CDS Intra-chr q22.1 q22.1 90131 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPEN-C1orf64 SPEN chr1 15848150 + C1orf64 chr1 16005919 + Exonic hg38 HNSC TCGA-CN-6024-01A 30 77 Out-of-frame Intra-chr p36.21 Transcription factor p36.13 Seq+ 90132 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBFA2T2-HM13 CBFA2T2 chr20 33490301 + HM13 chr20 31544947 + Exonic hg38 HNSC TCGA-CN-6024-01A 9 28 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 90133 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAPDH-TNC GAPDH chr12 6537010 + TNC chr9 115021267 - Exonic hg38 HNSC TCGA-CN-6024-01A 1 9 In-Frame Inter-chr p13.31 q33.1 90134 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMSB10-COL6A2 TMSB10 chr2 84905718 + COL6A2 chr21 46111450 + Exonic hg38 HNSC TCGA-CN-6989-01A 1 3 5'UTR-5'UTR Inter-chr p11.2 q22.3 90135 ChimerSeq TCGA FAWG TCGA_RNA-Seq IVNS1ABP-BAHCC1 IVNS1ABP chr1 185299710 - BAHCC1 chr17 81426800 + Exonic hg38 HNSC TCGA-CN-6992-01A 12 31 In-Frame Inter-chr q25.3 q25.3 90136 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPX2-UNC5D TPX2 chr20 31742647 + UNC5D chr8 35549292 + Exonic hg38 HNSC TCGA-CN-6992-01A 3 7 5'UTR-CDS Inter-chr q11.21 p12 Tumor suppressor gene Seq+ 90137 ChimerSeq TCGA FAWG TCGA_RNA-Seq DESI2-C1orf101 DESI2 chr1 244653355 + C1orf101 chr1 244635489 + Exonic hg38 HNSC TCGA-CN-6992-01A 1 12 Out-of-frame Intra-chr q44 90138 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13-INTS2 MED13 chr17 61962752 - INTS2 chr17 61912070 - Exonic hg38 HNSC TCGA-CN-6992-01A 1000 1000 Out-of-frame Intra-chr q23.2 q23.2 90139 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF21A-GLIS2 PHF21A chr11 45945840 - GLIS2 chr16 4336725 + Exonic hg38 HNSC TCGA-CN-6994-01A 4 29 CDS-3'UTR Inter-chr p11.2 Transcription factor p13.3 Transcription factor Seq+ 90140 ChimerSeq TCGA FAWG TCGA_RNA-Seq TYMP-ATP8B4 TYMP chr22 50529904 - ATP8B4 chr15 49987549 - Exonic hg38 HNSC TCGA-CN-6994-01A 1 10 5'UTR-CDS Inter-chr q13.33 q21.2 90141 ChimerSeq TCGA FAWG TCGA_RNA-Seq FKBP3-FANCM FKBP3 chr14 45129794 - FANCM chr14 45148837 + Exonic hg38 HNSC TCGA-CN-6994-01A 1 3 In-Frame Intra-chr q21.2 q21.2 90142 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO1-FOLR3 ANO1 chr11 70132079 + FOLR3 chr11 72135947 + Exonic hg38 HNSC TCGA-CN-6995-01A 2 25 5'UTR-5'UTR Intra-chr q13.3 q13.4 Seq+ 90143 ChimerSeq TCGA FAWG TCGA_RNA-Seq LYN-NTRK3 LYN chr8 55953984 + NTRK3 chr15 88033045 - Exonic hg38 HNSC TCGA-CN-6997-01A 24 146 In-Frame Inter-chr q12.1 TK:Src q25.3 Oncogene Tumor suppressor gene Seq+ 90144 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH1-MAPK1 NOTCH1 chr9 136511152 - MAPK1 chr22 21788808 - Exonic hg38 HNSC TCGA-CN-A498-01A 3 12 Out-of-frame Inter-chr q34.3 Oncogene Tumor suppressor gene q11.22 Oncogene Seq+ 90145 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK1-NOTCH1 MAPK1 chr22 21799012 - NOTCH1 chr9 136519565 - Exonic hg38 HNSC TCGA-CN-A498-01A 1 7 Out-of-frame Inter-chr q11.22 Oncogene q34.3 Oncogene Tumor suppressor gene Seq+ 90146 ChimerSeq TCGA FAWG TCGA_RNA-Seq VCL-SFXN2 VCL chr10 74043153 + SFXN2 chr10 102726612 + Exonic hg38 HNSC TCGA-CN-A499-01A 2 7 CDS-5'UTR Intra-chr q22.2 q24.32 Seq+ 90147 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK39-NCKAP5 STK39 chr2 168012634 - NCKAP5 chr2 132732051 - Exonic hg38 HNSC TCGA-CN-A49A-01A 8 35 In-Frame Intra-chr q24.3 q21.2 Seq+ 90148 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPHN-ATP6V1D GPHN chr14 67023675 + ATP6V1D chr14 67353040 - Exonic hg38 HNSC TCGA-CN-A49A-01A 1 7 Out-of-frame Intra-chr q23.3 q23.3 90149 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACROD1-TCN1 MACROD1 chr11 64151239 - TCN1 chr11 59854835 - Exonic hg38 HNSC TCGA-CN-A49C-01A 112 486 In-Frame Intra-chr q13.1 q12.1 Seq+ 90150 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPT1A-P4HA3 CPT1A chr11 68781771 - P4HA3 chr11 74289130 - Exonic hg38 HNSC TCGA-CN-A49C-01A 3 8 Out-of-frame Intra-chr q13.3 q13.4 Seq+ 90151 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-IKZF3 ERBB2 chr17 39717480 + IKZF3 chr17 39792933 - Exonic hg38 HNSC TCGA-CN-A49C-01A 1 9 Out-of-frame Intra-chr q12 Oncogene q21.1 Tumor suppressor gene Transcription factor Seq+ 90152 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIL1-DNAJC18 SIL1 chr5 139121035 - DNAJC18 chr5 139414272 - Exonic hg38 HNSC TCGA-CN-A63T-01A 7 13 In-Frame Intra-chr q31.2 q31.2 Seq+ 90153 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSTF3-CCDC73 CSTF3 chr11 33090532 - CCDC73 chr11 32760258 - Exonic hg38 HNSC TCGA-CN-A63T-01A 2 2 5'UTR-5'UTR Intra-chr p13 p13 Seq+ 90154 ChimerSeq TCGA FAWG TCGA_RNA-Seq OCIAD1-GLIPR2 OCIAD1 chr4 48831249 + GLIPR2 chr9 36162362 + Exonic hg38 HNSC TCGA-CN-A63U-01A 15 131 5'UTR-5'UTR Inter-chr p11 p13.3 Seq+ 90155 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A17-RBX1 SLC25A17 chr22 40792525 - RBX1 chr22 40967799 + Exonic hg38 HNSC TCGA-CN-A63U-01A 12 60 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 90156 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL17A1-CFAP43 COL17A1 chr10 104062258 - CFAP43 chr10 104167737 - Exonic hg38 HNSC TCGA-CN-A63W-01A 1 9 Out-of-frame Intra-chr q25.1 q25.1 90157 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEAK1-USP31 PEAK1 chr15 77420006 - USP31 chr16 23102463 - Exonic hg38 HNSC TCGA-CN-A63W-01A 1 9 5'UTR-CDS Inter-chr q24.3 p12.2 90158 ChimerSeq TCGA FAWG TCGA_RNA-Seq OXR1-VPS13B OXR1 chr8 106359636 + VPS13B chr8 99699525 + Exonic hg38 HNSC TCGA-CN-A63W-01A 1 3 Out-of-frame Intra-chr q23.1 q22.2 Seq+ 90159 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPRR2G-SPRR1B SPRR2G chr1 153149904 - SPRR1B chr1 153032460 + Exonic hg38 HNSC TCGA-CN-A641-01A 1000 1000 Out-of-frame Intra-chr q21.3 q21.3 90160 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOB3A-STK11 MOB3A chr19 2076811 - STK11 chr19 1216268 + Exonic hg38 HNSC TCGA-CN-A642-01A 13 71 Out-of-frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Seq+ 90161 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBFA2T2-REM1 CBFA2T2 chr20 33490301 + REM1 chr20 31476227 + Exonic hg38 HNSC TCGA-CN-A6UY-01A 1 6 CDS-5'UTR Intra-chr q11.21 q11.21 Seq+ 90162 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPT1A-SHANK2 CPT1A chr11 68773265 - SHANK2 chr11 71174844 - Exonic hg38 HNSC TCGA-CQ-5323-01A 6 55 CDS-5'UTR Intra-chr q13.3 q13.4 Seq+ 90163 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPT1A-FGF3 CPT1A chr11 68839552 - FGF3 chr11 69816423 - Exonic hg38 HNSC TCGA-CQ-5323-01A 1 17 5'UTR-CDS Intra-chr q13.3 q13.3 Seq+ 90164 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCHSD2-NUMA1 FCHSD2 chr11 72889829 - NUMA1 chr11 72006263 - Exonic hg38 HNSC TCGA-CQ-5323-01A 2 9 In-Frame Intra-chr q13.4 q13.4 Oncogene Seq+ 90165 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF121-PPFIA1 RNF121 chr11 71929124 + PPFIA1 chr11 70372212 + Exonic hg38 HNSC TCGA-CQ-5323-01A 1 10 5'UTR-5'UTR Intra-chr q13.4 q13.3 90166 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTERF1-PHTF2 MTERF1 chr7 91880055 - PHTF2 chr7 77893608 + Exonic hg38 HNSC TCGA-CQ-5326-01A 2 3 Out-of-frame Intra-chr q21.2 Transcription factor q11.23 90167 ChimerSeq TCGA FAWG TCGA_RNA-Seq RWDD4-SORBS2 RWDD4 chr4 183650984 - SORBS2 chr4 185652728 - Exonic hg38 HNSC TCGA-CQ-5326-01A 1 5 In-Frame Intra-chr q35.1 q35.1 Seq+ 90168 ChimerSeq TCGA FAWG TCGA_RNA-Seq PANX1-HEPHL1 PANX1 chr11 94129493 + HEPHL1 chr11 94111537 + Exonic hg38 HNSC TCGA-CQ-5332-01A 4 41 In-Frame Intra-chr q21 q21 Seq+ 90169 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL1A-RIOK3 OSBPL1A chr18 24225042 - RIOK3 chr18 23473429 + Exonic hg38 HNSC TCGA-CQ-5332-01A 2 15 In-Frame Intra-chr q11.2 q11.2 Atypical:RIO Seq+ 90170 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARP1-LIN9 PARP1 chr1 226374226 - LIN9 chr1 226250919 - Exonic hg38 HNSC TCGA-CQ-5332-01A 4 6 In-Frame Intra-chr q42.12 Oncogene Tumor suppressor gene q42.12 Tumor suppressor gene Seq+ 90171 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS8L2-AGPAT2 EPS8L2 chr11 709608 + AGPAT2 chr9 136674807 - Exonic hg38 HNSC TCGA-CQ-5333-01A 95 542 Out-of-frame Inter-chr p15.5 q34.3 Seq+ 90172 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE7A-NRG1 PDE7A chr8 65779720 - NRG1 chr8 32727949 + Exonic hg38 HNSC TCGA-CQ-5334-01A 4 23 In-Frame Intra-chr q13.1 p12 Seq+ 90173 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP13-RFX7 AKAP13 chr15 85380798 + RFX7 chr15 56087509 - Exonic hg38 HNSC TCGA-CQ-6219-01A 3 56 5'UTR-CDS Intra-chr q25.3 q21.3 Transcription factor Seq+ 90174 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTSA-WFDC3 CTSA chr20 45895133 + WFDC3 chr20 45789945 - Exonic hg38 HNSC TCGA-CQ-6220-01A 1 6 In-Frame Intra-chr q13.12 q13.12 90175 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGCD-LCP2 SGCD chr5 156344677 + LCP2 chr5 170297725 - Exonic hg38 HNSC TCGA-CQ-6221-01A 7 11 CDS-5'UTR Intra-chr q33.2 q35.1 Seq+ 90176 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL3A1-RPS4X COL3A1 chr2 189006259 + RPS4X chrX 72272772 - Exonic hg38 HNSC TCGA-CQ-6221-01A 1 7 CDS-3'UTR Inter-chr q32.2 q13.1 90177 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNAPC1-FLJ22447 SNAPC1 chr14 61768740 + FLJ22447 chr14 61650962 + Exonic hg38 HNSC TCGA-CQ-6223-01A 4 46 CDS-5'UTR Intra-chr q23.2 q23.1 90178 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRD-CYGB PTPRD chr9 9938507 - CYGB chr17 76528611 - Exonic hg38 HNSC TCGA-CQ-6224-01A 1 30 5'UTR-CDS Inter-chr Oncogene Tumor suppressor gene q25.1 Tumor suppressor gene Seq+ 90179 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALG8-FGF19 ALG8 chr11 78124021 - FGF19 chr11 69699576 - Exonic hg38 HNSC TCGA-CQ-6224-01A 2 7 Out-of-frame Intra-chr q14.1 q13.3 Seq+ 90180 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2AK4-EPB42 EIF2AK4 chr15 39939617 + EPB42 chr15 43203275 - Exonic hg38 HNSC TCGA-CQ-6225-01A 3 17 Out-of-frame Intra-chr q15.1 q15.2 Seq+ 90181 ChimerSeq TCGA FAWG TCGA_RNA-Seq DUS1L-CCDC57 DUS1L chr17 82060701 - CCDC57 chr17 82101866 - Exonic hg38 HNSC TCGA-CQ-6225-01A 1 6 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 90182 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1B-ZNF536 MYO1B chr2 191350225 + ZNF536 chr19 30443561 + Exonic hg38 HNSC TCGA-CQ-6225-01A 1 3 CDS-5'UTR Inter-chr q32.3 q12 Transcription factor Seq+ 90183 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP2B1-RAB20 AP2B1 chr17 35594067 + RAB20 chr13 110524197 - Exonic hg38 HNSC TCGA-CQ-6225-01A 1 2 In-Frame Inter-chr q12 q34 90184 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD6-BPIFB1 FRMD6 chr14 51570410 + BPIFB1 chr20 33286033 + Exonic hg38 HNSC TCGA-CQ-6227-01A 14 239 5'UTR-5'UTR Inter-chr q22.1 q11.21 Seq+ 90185 ChimerSeq TCGA FAWG TCGA_RNA-Seq PANX1-CEP126 PANX1 chr11 94153630 + CEP126 chr11 101944265 + Exonic hg38 HNSC TCGA-CQ-6228-01A 31 126 Out-of-frame Intra-chr q21 q22.1 90186 ChimerSeq TCGA FAWG TCGA_RNA-Seq YIPF1-YTHDF2 YIPF1 chr1 53878315 - YTHDF2 chr1 28768929 + Exonic hg38 HNSC TCGA-CQ-6228-01A 31 80 Out-of-frame Intra-chr p32.3 p35.3 Seq+ 90187 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGLN1-C1orf131 EGLN1 chr1 231420998 - C1orf131 chr1 231239188 - Exonic hg38 HNSC TCGA-CQ-6228-01A 6 28 Out-of-frame Intra-chr q42.2 Tumor suppressor gene q42.2 Seq+ 90188 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALK2-TERB2 GALK2 chr15 49292537 + TERB2 chr15 44978489 + Exonic hg38 HNSC TCGA-CQ-6228-01A 4 16 In-Frame Intra-chr q21.1 q21.1 90189 ChimerSeq TCGA FAWG TCGA_RNA-Seq LYST-DISC1 LYST chr1 235716712 - DISC1 chr1 231795242 + Exonic hg38 HNSC TCGA-CQ-6228-01A 3 7 Out-of-frame Intra-chr q42.3 q42.2 Seq+ 90190 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA2-DCUN1D5 NCOA2 chr8 70403700 - DCUN1D5 chr11 103083326 - Exonic hg38 HNSC TCGA-CQ-6228-01A 2 5 5'UTR-5'UTR Inter-chr q13.3 Oncogene Transcription factor q22.3 90191 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNE2-ITPK1 SYNE2 chr14 64020093 + ITPK1 chr14 92993997 - Exonic hg38 HNSC TCGA-CQ-6229-01A 3 39 CDS-5'UTR Intra-chr q23.2 Seq+ 90192 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKN2A-MTAP CDKN2A chr9 21974678 - MTAP chr9 21815433 + Exonic hg38 HNSC TCGA-CQ-7063-01A 18 48 In-Frame Intra-chr p21.3 Oncogene Tumor suppressor gene p21.3 Tumor suppressor gene Seq+ 90193 ChimerSeq TCGA FAWG TCGA_RNA-Seq NXN-WRAP53 NXN chr17 979319 - WRAP53 chr17 7700741 + Exonic hg38 HNSC TCGA-CQ-7065-01A 23 173 In-Frame Intra-chr p13.3 p13.1 Seq+ 90194 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH2-SPAG17 NOTCH2 chr1 120069334 - SPAG17 chr1 117981401 - Exonic hg38 HNSC TCGA-CQ-7065-01A 6 47 In-Frame Intra-chr p12 Oncogene Tumor suppressor gene p12 Seq+ 90195 ChimerSeq TCGA FAWG TCGA_RNA-Seq BACH1-DSCR3 BACH1 chr21 29329693 + DSCR3 chr21 37240639 - Exonic hg38 HNSC TCGA-CQ-7065-01A 5 25 Out-of-frame Intra-chr q21.3 Transcription factor q22.13 Seq+ 90196 ChimerSeq TCGA FAWG TCGA_RNA-Seq COLGALT1-PGLS COLGALT1 chr19 17559421 + PGLS chr19 17516173 + Exonic hg38 HNSC TCGA-CQ-7067-01A 1 17 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 90197 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF57-MRE11 ZNF57 chr19 2901048 + MRE11 chr11 94461036 - Exonic hg38 HNSC TCGA-CQ-7068-01A 1 1 Out-of-frame Inter-chr p13.3 Transcription factor q21 90198 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERTAD2-TGFA SERTAD2 chr2 64750281 - TGFA chr2 70465733 - Exonic hg38 HNSC TCGA-CQ-7069-01A 8 99 5'UTR-CDS Intra-chr p14 p13.3 Seq+ 90199 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTG1-SPRR1B ACTG1 chr17 81512232 - SPRR1B chr1 153032327 + Exonic hg38 HNSC TCGA-CQ-7071-01A 1 9 CDS-5'UTR Inter-chr q25.3 q21.3 90200 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM117-KIF16B TMEM117 chr12 43944342 + KIF16B chr20 16312418 - Exonic hg38 HNSC TCGA-CQ-7072-01A 4 24 In-Frame Inter-chr q12 p12.1 Seq+ 90201 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1X-WWC3 TBL1X chrX 9501849 + WWC3 chrX 10090771 + Exonic hg38 HNSC TCGA-CQ-7072-01A 1 6 5'UTR-CDS Intra-chr p22.31 p22.2 90202 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHSY1-PPP1CA CHSY1 chr15 101235255 - PPP1CA chr11 67401199 - Exonic hg38 HNSC TCGA-CQ-A4C6-01A 4 49 Out-of-frame Inter-chr q26.3 q13.2 Tumor suppressor gene Seq+ 90203 ChimerSeq TCGA FAWG TCGA_RNA-Seq C16orf74-EMC8 C16orf74 chr16 85750926 - EMC8 chr16 85780473 - Exonic hg38 HNSC TCGA-CQ-A4C7-01A 3 14 5'UTR-CDS Intra-chr q24.1 q24.1 Seq+ 90204 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNDC3B-KLF13 FNDC3B chr3 172133546 + KLF13 chr15 31435370 + Exonic hg38 HNSC TCGA-CQ-A4C7-01A 1 3 CDS-3'UTR Inter-chr q26.31 Transcription factor 90205 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAIP1-TMEM267 PAIP1 chr5 43555830 - TMEM267 chr5 43446557 - Exonic hg38 HNSC TCGA-CQ-A4C9-01A 2 22 In-Frame Intra-chr p12 p12 90206 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELP4-EIF3M ELP4 chr11 31650221 + EIF3M chr11 32594914 + Exonic hg38 HNSC TCGA-CQ-A4C9-01A 1 12 Out-of-frame Intra-chr p13 p13 90207 ChimerSeq TCGA FAWG TCGA_RNA-Seq UXS1-TMEM241 UXS1 chr2 106158058 - TMEM241 chr18 23399647 - Exonic hg38 HNSC TCGA-CQ-A4C9-01A 1 5 Out-of-frame Inter-chr q12.2 q11.2 90208 ChimerSeq TCGA FAWG TCGA_RNA-Seq CIR1-NFE2L2 CIR1 chr2 174395601 - NFE2L2 chr2 177283805 - Exonic hg38 HNSC TCGA-CQ-A4C9-01A 1000 1000 Out-of-frame Intra-chr q31.1 q31.2 Oncogene Transcription factor 90209 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNA12-PHC3 GNA12 chr7 2843853 - PHC3 chr3 170178938 - Exonic hg38 HNSC TCGA-CQ-A4CA-01A 2 23 Out-of-frame Inter-chr p22.2 q26.2 Tumor suppressor gene Seq+ 90210 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R2-GMNC PPP1R2 chr3 195542904 - GMNC chr3 190860858 - Exonic hg38 HNSC TCGA-CQ-A4CB-01A 1 4 Out-of-frame Intra-chr q29 q28 90211 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICU1-DNAJB12 MICU1 chr10 72475100 - DNAJB12 chr10 72336696 - Exonic hg38 HNSC TCGA-CQ-A4CG-01A 1 12 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 90212 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHBP1-MDH1 EHBP1 chr2 62874532 + MDH1 chr2 63594488 + Exonic hg38 HNSC TCGA-CQ-A4CH-01A 28 137 In-Frame Intra-chr p15 p15 Seq+ 90213 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHST10-MAP4K4 CHST10 chr2 100402564 - MAP4K4 chr2 101823928 + Exonic hg38 HNSC TCGA-CQ-A4CH-01A 19 81 In-Frame Intra-chr q11.2 Tumor suppressor gene q11.2 Seq+ 90214 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITSN1-CHODL ITSN1 chr21 33642713 + CHODL chr21 17917220 + Exonic hg38 HNSC TCGA-CQ-A4CH-01A 1 28 5'UTR-5'UTR Intra-chr q22.11 q21.1 Seq+ 90215 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAPLN-MYL4 PAPLN chr14 73274459 + MYL4 chr17 47209389 + Exonic hg38 HNSC TCGA-CQ-A4CH-01A 4 13 5'UTR-5'UTR Inter-chr q24.2 q21.32 Seq+ 90216 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC10-MDS2 TRAPPC10 chr21 44012560 + MDS2 chr1 23639680 + Exonic hg38 HNSC TCGA-CQ-A4CH-01A 2 6 Out-of-frame Inter-chr q22.3 p36.12 Seq+ 90217 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH2D3A-GPM6A SH2D3A chr19 6767387 - GPM6A chr4 175651987 - Exonic hg38 HNSC TCGA-CQ-A4CI-01A 7 38 5'UTR-CDS Inter-chr p13.3 q34.2 Seq+ 90218 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPS7A-RPLP0 COPS7A chr12 6724818 + RPLP0 chr12 120197462 - Exonic hg38 HNSC TCGA-CR-5243-01A 1 1 In-Frame Intra-chr p13.31 q24.23 90219 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLN3-C15orf32 CLN3 chr16 28484006 - C15orf32 chr15 92500358 + Exonic hg38 HNSC TCGA-CR-5247-01A 5 18 CDS-5'UTR Inter-chr p12.1 q26.1 Seq+ 90220 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFDP2-COG5 TFDP2 chr3 142093061 - COG5 chr7 107324521 - Exonic hg38 HNSC TCGA-CR-5247-01A 2 29 5'UTR-5'UTR Inter-chr q23 Transcription factor Seq+ 90221 ChimerSeq TCGA FAWG TCGA_RNA-Seq NADSYN1-GSTP1 NADSYN1 chr11 71458544 + GSTP1 chr11 67584685 + Exonic hg38 HNSC TCGA-CR-5247-01A 1 3 Out-of-frame Intra-chr q13.4 q13.2 Tumor suppressor gene 90222 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAGI1-DPH3 MAGI1 chr3 65621972 - DPH3 chr3 16260829 - Exonic hg38 HNSC TCGA-CR-5248-01A 2 3 Out-of-frame Intra-chr Oncogene p25.1 Seq+ 90223 ChimerSeq TCGA FAWG TCGA_RNA-Seq SESN1-CENPW SESN1 chr6 109093795 - CENPW chr6 126346205 + Exonic hg38 HNSC TCGA-CR-5250-01A 1 3 In-Frame Intra-chr q21 q22.32 90224 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFP36-OAZ1 ZFP36 chr19 39406928 + OAZ1 chr19 2271385 + Exonic hg38 HNSC TCGA-CR-5250-01A 1 1 Out-of-frame Intra-chr q13.2 Tumor suppressor gene p13.3 90225 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIP12-PID1 TRIP12 chr2 229879982 - PID1 chr2 229155964 - Exonic hg38 HNSC TCGA-CR-6467-01A 12 57 Out-of-frame Intra-chr q36.3 q36.3 Seq+ 90226 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCC4-ABCB4 ABCC4 chr13 95177707 - ABCB4 chr7 87409392 - Exonic hg38 HNSC TCGA-CR-6467-01A 4 73 In-Frame Inter-chr q32.1 q21.12 Seq+ 90227 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC12-LUC7L2 TTC12 chr11 113344440 + LUC7L2 chr7 139412551 + Exonic hg38 HNSC TCGA-CR-6467-01A 3 16 In-Frame Inter-chr q23.2 q34 Seq+ 90228 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTDH-MATN2 MTDH chr8 97644887 + MATN2 chr8 97961408 + Exonic hg38 HNSC TCGA-CR-6467-01A 4 5 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 90229 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLDN10-TTC12 CLDN10 chr13 95577338 + TTC12 chr11 113350073 + Exonic hg38 HNSC TCGA-CR-6467-01A 2 3 In-Frame Inter-chr q32.1 q23.2 Seq+ 90230 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA5-DCTN2 PLEKHA5 chr12 19132450 + DCTN2 chr12 57535845 - Exonic hg38 HNSC TCGA-CR-6470-01A 1 4 Out-of-frame Intra-chr p12.3 q13.3 90231 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806934 + TACC3 chr4 1737598 + Exonic hg38 HNSC TCGA-CR-6473-01A 268 1764 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 90232 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFB2M-SMYD3 TFB2M chr1 246564346 - SMYD3 chr1 246335474 - Exonic hg38 HNSC TCGA-CR-6474-01A 21 96 In-Frame Intra-chr q44 q44 Transcription factor Seq+ 90233 ChimerSeq TCGA FAWG TCGA_RNA-Seq MVP-ZNF267 MVP chr16 29831073 + ZNF267 chr16 31914476 + Exonic hg38 HNSC TCGA-CR-6474-01A 15 54 Out-of-frame Intra-chr p11.2 p11.2 Transcription factor Seq+ 90234 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMBIM4-TMEM131 TMBIM4 chr12 66169855 - TMEM131 chr2 97814388 - Exonic hg38 HNSC TCGA-CR-6478-01A 10 96 Out-of-frame Inter-chr q14.3 q11.2 Seq+ 90235 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD23-FAM178B ANKRD23 chr2 96857888 - FAM178B chr2 96902707 - Exonic hg38 HNSC TCGA-CR-6478-01A 16 44 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 90236 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF21A-TSPAN8 KIF21A chr12 39442927 - TSPAN8 chr12 71157787 - Exonic hg38 HNSC TCGA-CR-6478-01A 16 42 CDS-5'UTR Intra-chr q12 q21.1 Seq+ 90237 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPI-EYS GPI chr19 34396430 + EYS chr6 65057727 - Exonic hg38 HNSC TCGA-CR-6478-01A 9 56 In-Frame Inter-chr q12 Seq+ 90238 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSD17B12-TP53I11 HSD17B12 chr11 43816391 + TP53I11 chr11 44939190 - Exonic hg38 HNSC TCGA-CR-6478-01A 4 12 CDS-5'UTR Intra-chr p11.2 p11.2 Seq+ 90239 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAV2-TES CAV2 chr7 116500447 + TES chr7 116249020 + Exonic hg38 HNSC TCGA-CR-6478-01A 2 5 In-Frame Intra-chr q31.2 q31.2 Tumor suppressor gene 90240 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1orf174-RAD18 C1orf174 chr1 3892883 - RAD18 chr3 8881459 - Exonic hg38 HNSC TCGA-CR-6480-01A 30 106 Out-of-frame Inter-chr p36.32 p25.3 Seq+ 90241 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPARA-SLC16A7 PPARA chr22 46151970 + SLC16A7 chr12 59655152 + Exonic hg38 HNSC TCGA-CR-6480-01A 4 44 5'UTR-5'UTR Inter-chr q13.31 Tumor suppressor gene Transcription factor q14.1 Seq+ 90242 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF21A-IGKJ3 KIF21A chr12 39331730 - IGKJ3 chr2 88861257 - Exonic hg38 HNSC TCGA-CR-6481-01A 59 0 Out-of-frame Inter-chr q12 p11.2 Seq+ 90243 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMC1-ZCWPW2 CMC1 chr3 28241812 + ZCWPW2 chr3 28435110 + Exonic hg38 HNSC TCGA-CR-6481-01A 2 12 Out-of-frame Intra-chr p24.1 p24.1 Seq+ 90244 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCB9-MPHOSPH9 ABCB9 chr12 122966287 - MPHOSPH9 chr12 123166789 - Exonic hg38 HNSC TCGA-CR-6482-01A 1 7 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 90245 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKL3-IGKJ2 CDKL3 chr5 134319471 - IGKJ2 chr2 88861559 - Exonic hg38 HNSC TCGA-CR-6484-01A 28 0 Out-of-frame Inter-chr q31.1 CMGC:CDKL p11.2 90246 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP1-UBE2F AGAP1 chr2 235494849 + UBE2F chr2 237973092 + Exonic hg38 HNSC TCGA-CR-6484-01A 7 49 CDS-5'UTR Intra-chr q37.2 q37.3 Seq+ 90247 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNhg38-CSF1R SNhg38 chr16 2154860 - CSF1R chr5 150086607 - Exonic hg38 HNSC TCGA-CR-6487-01A 33 262 Out-of-frame Inter-chr p13.3 q32 Oncogene 90248 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSC1-DOLPP1 TSC1 chr9 132921363 - DOLPP1 chr9 129086709 + Exonic hg38 HNSC TCGA-CR-6487-01A 16 62 In-Frame Intra-chr q34.13 Oncogene Tumor suppressor gene q34.11 Seq+ 90249 ChimerSeq TCGA FAWG TCGA_RNA-Seq IP6K1-TRAIP IP6K1 chr3 49786354 - TRAIP chr3 49840373 - Exonic hg38 HNSC TCGA-CR-6488-01A 1 26 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 90250 ChimerSeq TCGA FAWG TCGA_RNA-Seq AATF-PCDH11X AATF chr17 37031685 + PCDH11X chrX 92618264 + Exonic hg38 HNSC TCGA-CR-6488-01A 2 12 3'UTR-3'UTR Inter-chr q21.31 Seq+ 90251 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH2L-C8orf86 ASH2L chr8 38110833 + C8orf86 chr8 38516512 - Exonic hg38 HNSC TCGA-CR-7364-01A 6 10 In-Frame Intra-chr p11.23 p11.22 Seq+ 90252 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF4EBP1-TACC1 EIF4EBP1 chr8 38030718 + TACC1 chr8 38846699 + Exonic hg38 HNSC TCGA-CR-7364-01A 4 4 Out-of-frame Intra-chr p11.23 p11.22 Seq+ 90253 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFB2M-SMYD3 TFB2M chr1 246548545 - SMYD3 chr1 245929937 - Exonic hg38 HNSC TCGA-CR-7367-01A 28 39 In-Frame Intra-chr q44 q44 Transcription factor Seq+ 90254 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIAM1-PCBP3 TIAM1 chr21 31339243 - PCBP3 chr21 45896208 + Exonic hg38 HNSC TCGA-CR-7367-01A 7 19 5'UTR-5'UTR Intra-chr q22.11 q22.3 Seq+ 90255 ChimerSeq TCGA FAWG TCGA_RNA-Seq XXYLT1-OPA1 XXYLT1 chr3 195156449 - OPA1 chr3 193614723 + Exonic hg38 HNSC TCGA-CR-7367-01A 2 2 In-Frame Intra-chr q29 q29 90256 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55019365 + SEPT14 chr7 55807258 - Exonic hg38 HNSC TCGA-CR-7368-01A 1 7 Out-of-frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 90257 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLBP-LETM1 SLBP chr4 1694774 - LETM1 chr4 1825683 - Exonic hg38 HNSC TCGA-CR-7370-01A 16 112 In-Frame Intra-chr p16.3 p16.3 Seq+ 90258 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD14-CCDC148 PSMD14 chr2 161385571 + CCDC148 chr2 158220713 - Exonic hg38 HNSC TCGA-CR-7370-01A 1 4 In-Frame Intra-chr q24.2 q24.1 90259 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK1-RPL29 ROCK1 chr18 21110818 - RPL29 chr3 51995880 - Exonic hg38 HNSC TCGA-CR-7371-01A 12 15 CDS-5'UTR Inter-chr q11.1 AGC:DMPK p21.2 Seq+ 90260 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3GL1-STAP2 SH3GL1 chr19 4400324 - STAP2 chr19 4334044 - Exonic hg38 HNSC TCGA-CR-7371-01A 1000 1000 In-Frame Intra-chr p13.3 p13.3 Seq+ 90261 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREBBP-ATG10 CREBBP chr16 3850297 - ATG10 chr5 82058495 + Exonic hg38 HNSC TCGA-CR-7374-01A 6 30 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene q14.1 Seq+ 90262 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGKC-SPSB1 IGKC chr2 88857255 - SPSB1 chr1 9356106 + Exonic hg38 HNSC TCGA-CR-7374-01A 6 1 Out-of-frame Inter-chr p11.2 p36.22 Seq+ 90263 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSDE1-CYB5B CSDE1 chr1 114737999 - CYB5B chr16 69430154 + Exonic hg38 HNSC TCGA-CR-7374-01A 4 5 Out-of-frame Inter-chr p13.2 q22.1 Seq+ 90264 ChimerSeq TCGA FAWG TCGA_RNA-Seq TYW1-SIRPB2 TYW1 chr7 67195337 + SIRPB2 chr20 1480065 - Exonic hg38 HNSC TCGA-CR-7374-01A 2 5 Out-of-frame Inter-chr q11.21 p13 Seq+ 90265 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALY-RPN2 RALY chr20 34031604 + RPN2 chr20 37223878 + Exonic hg38 HNSC TCGA-CR-7374-01A 1 8 5'UTR-CDS Intra-chr q11.22 q11.23 90266 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSD11B1L-SAFB HSD11B1L chr19 5687668 + SAFB chr19 5664022 + Exonic hg38 HNSC TCGA-CR-7374-01A 1 5 In-Frame Intra-chr p13.3 p13.3 Tumor suppressor gene Transcription factor Seq+ 90267 ChimerSeq TCGA FAWG TCGA_RNA-Seq APTX-NOL6 APTX chr9 33001567 - NOL6 chr9 33472412 - Exonic hg38 HNSC TCGA-CR-7376-01A 6 9 5'UTR-CDS Intra-chr p21.1 p13.3 Seq+ 90268 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNTFR-KIF24 CNTFR chr9 34581095 - KIF24 chr9 34297114 - Exonic hg38 HNSC TCGA-CR-7376-01A 1 19 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 90269 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHMP5-GALT CHMP5 chr9 33276564 + GALT chr9 34646677 + Exonic hg38 HNSC TCGA-CR-7376-01A 2 4 CDS-5'UTR Intra-chr p13.3 p13.3 90270 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFX1-ARHGEF39 NFX1 chr9 33319127 + ARHGEF39 chr9 35664126 - Exonic hg38 HNSC TCGA-CR-7376-01A 1 3 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 90271 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNC13B-DNAJB5 UNC13B chr9 35162305 + DNAJB5 chr9 34993200 + Exonic hg38 HNSC TCGA-CR-7376-01A 1 1 Out-of-frame Intra-chr p13.3 p13.3 90272 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARD3-ARMC4 PARD3 chr10 34814876 - ARMC4 chr10 27907777 - Exonic hg38 HNSC TCGA-CR-7377-01A 4 25 Out-of-frame Intra-chr p11.21 p12.1 Seq+ 90273 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERC1-ANKRD26 ERC1 chr12 1116033 + ANKRD26 chr10 27005723 - Exonic hg38 HNSC TCGA-CR-7377-01A 1 3 Out-of-frame Inter-chr p12.1 90274 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSG1-DSCAS DSG1 chr18 31340025 + DSCAS chr18 31150799 + Exonic hg38 HNSC TCGA-CR-7379-01A 6 12 CDS-5'UTR Intra-chr q12.1 q12.1 90275 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAS6-ATP4B GAS6 chr13 113846527 - ATP4B chr13 113654942 - Exonic hg38 HNSC TCGA-CR-7379-01A 4 10 In-Frame Intra-chr q34 Oncogene q34 Seq+ 90276 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUDT3-CDH12 NUDT3 chr6 34392264 - CDH12 chr5 21817132 - Exonic hg38 HNSC TCGA-CR-7379-01A 1 9 Out-of-frame Inter-chr p21.31 p14.3 Seq+ 90277 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H4-SAE1 ZC3H4 chr19 47081513 - SAE1 chr19 47203671 + Exonic hg38 HNSC TCGA-CR-7379-01A 1 4 Out-of-frame Intra-chr q13.32 q13.32 90278 ChimerSeq TCGA FAWG TCGA_RNA-Seq IDH3A-SH2D7 IDH3A chr15 78149430 + SH2D7 chr15 78094116 + Exonic hg38 HNSC TCGA-CR-7380-01A 4 2 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 90279 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNH1-HRAS RNH1 chr11 507113 - HRAS chr11 533944 - Exonic hg38 HNSC TCGA-CR-7382-01A 51 314 5'UTR-5'UTR Intra-chr Tumor suppressor gene p15.5 Oncogene Seq+ 90280 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFRKB-FEN1 NFRKB chr11 129892715 - FEN1 chr11 61796922 + Exonic hg38 HNSC TCGA-CR-7382-01A 1 10 CDS-3'UTR Intra-chr q24.3 q12.2 90281 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCUN1D4-GPM6B DCUN1D4 chr4 51863709 + GPM6B chrX 13785808 - Exonic hg38 HNSC TCGA-CR-7383-01A 9 49 In-Frame Inter-chr q12 p22.2 Seq+ 90282 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCMTD1-ARHGAP26 PCMTD1 chr8 51898930 - ARHGAP26 chr5 143207198 + Exonic hg38 HNSC TCGA-CR-7383-01A 2 1 In-Frame Inter-chr q11.23 q31.3 90283 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM25-TRIM37 TRIM25 chr17 56892018 - TRIM37 chr17 58982921 - Exonic hg38 HNSC TCGA-CR-7385-01A 14 43 In-Frame Intra-chr q22 q22 90284 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2K5-RAB27A MAP2K5 chr15 67543470 + RAB27A chr15 55234956 - Exonic hg38 HNSC TCGA-CR-7386-01A 1 6 CDS-5'UTR Intra-chr q23 STE:STE7 q21.3 Seq+ 90285 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAP1GDS1-GSTCD RAP1GDS1 chr4 98352601 + GSTCD chr4 105845441 + Exonic hg38 HNSC TCGA-CR-7388-01A 4 9 In-Frame Intra-chr q23 q24 Seq+ 90286 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBFB-ATP13A3 CBFB chr16 67029813 + ATP13A3 chr3 194462236 - Exonic hg38 HNSC TCGA-CR-7388-01A 1 9 CDS-5'UTR Inter-chr q22.1 q29 Seq+ 90287 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAM17-ITGB1BP1 ADAM17 chr2 9555509 - ITGB1BP1 chr2 9418732 - Exonic hg38 HNSC TCGA-CR-7389-01A 1 12 CDS-5'UTR Intra-chr p25.1 p25.1 Seq+ 90288 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHC1-EFNA3 SHC1 chr1 154965543 - EFNA3 chr1 155085091 + Exonic hg38 HNSC TCGA-CR-7390-01A 7 51 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 90289 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPIDR-SNX7 SPIDR chr8 47713641 + SNX7 chr1 98760054 + Exonic hg38 HNSC TCGA-CR-7390-01A 7 20 Out-of-frame Inter-chr q11.21 p21.3 Seq+ 90290 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC1-MLIP LRRC1 chr6 53795415 + MLIP chr6 54124473 + Exonic hg38 HNSC TCGA-CR-7392-01A 3 24 In-Frame Intra-chr p12.1 p12.1 Seq+ 90291 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUX1-CAV2 CUX1 chr7 102115273 + CAV2 chr7 116316432 + Exonic hg38 HNSC TCGA-CR-7392-01A 2 11 CDS-5'UTR Intra-chr q22.1 Tumor suppressor gene Transcription factor q31.2 90292 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK2-LPIN1 ROCK2 chr2 11192148 - LPIN1 chr2 11765533 + Exonic hg38 HNSC TCGA-CR-7392-01A 1 3 Out-of-frame Intra-chr p25.1 AGC:DMPK p25.1 90293 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNB1-NADK GNB1 chr1 1890820 - NADK chr1 1757310 - Exonic hg38 HNSC TCGA-CR-7395-01A 11 15 5'UTR-CDS Intra-chr p36.33 p36.33 Seq+ 90294 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCMH1-SHISA5 SCMH1 chr1 41186121 - SHISA5 chr3 48501293 - Exonic hg38 HNSC TCGA-CR-7397-01A 2 34 In-Frame Inter-chr p34.2 Transcription factor p21.31 Seq+ 90295 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITCH-CASS4 ITCH chr20 34424525 + CASS4 chr20 56445900 + Exonic hg38 HNSC TCGA-CR-7397-01A 2 15 Out-of-frame Intra-chr q11.22 q13.31 Seq+ 90296 ChimerSeq TCGA FAWG TCGA_RNA-Seq AK3-RCL1 AK3 chr9 4722506 - RCL1 chr9 4823548 + Exonic hg38 HNSC TCGA-CR-7399-01A 44 168 In-Frame Intra-chr p24.1 p24.1 Seq+ 90297 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGCR2-ANO1 DGCR2 chr22 19122128 - ANO1 chr11 70103066 + Exonic hg38 HNSC TCGA-CR-7399-01A 28 123 Out-of-frame Inter-chr q11.21 q13.3 Seq+ 90298 ChimerSeq TCGA FAWG TCGA_RNA-Seq VTI1B-PLEKHH1 VTI1B chr14 67656416 - PLEKHH1 chr14 67585568 + Exonic hg38 HNSC TCGA-CR-7399-01A 7 47 In-Frame Intra-chr q24.1 q24.1 Seq+ 90299 ChimerSeq TCGA FAWG TCGA_RNA-Seq APP-FRG2LP APP chr21 26021840 - FRG2LP chr18 14138856 + Exonic hg38 HNSC TCGA-CR-7401-01A 12 80 Out-of-frame Inter-chr q21.3 p11.21 90300 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSG2-DSG4 DSG2 chr18 31541314 + DSG4 chr18 31399272 + Exonic hg38 HNSC TCGA-CR-7402-01A 62 275 In-Frame Intra-chr q12.1 q12.1 90301 ChimerSeq TCGA FAWG TCGA_RNA-Seq VCL-SEC24C VCL chr10 74043153 + SEC24C chr10 73766760 + Exonic hg38 HNSC TCGA-CR-7402-01A 30 103 In-Frame Intra-chr q22.2 q22.2 Seq+ 90302 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFNA1-FLAD1 EFNA1 chr1 155128069 + FLAD1 chr1 154989560 + Exonic hg38 HNSC TCGA-CR-7404-01A 1 4 Out-of-frame Intra-chr q22 q21.3 90303 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSGIN2-RIPK2 OSGIN2 chr8 89914746 + RIPK2 chr8 89786593 + Exonic hg38 HNSC TCGA-CV-5430-01A 27 61 In-Frame Intra-chr q21.3 q21.3 TKL:RIPK Seq+ 90304 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF8-SLCO1C1 PHF8 chrX 54022259 - SLCO1C1 chr12 20717132 + Exonic hg38 HNSC TCGA-CV-5430-01A 1 7 Out-of-frame Inter-chr p11.22 p12.2 90305 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-UNC45B FBXL20 chr17 39401361 - UNC45B chr17 35171322 + Exonic hg38 HNSC TCGA-CV-5431-01A 33 117 In-Frame Intra-chr q12 q12 Seq+ 90306 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGHGP-NOTCH1 IGHGP chr14 105668254 - NOTCH1 chr9 136508977 - Exonic hg38 HNSC TCGA-CV-5431-01A 11 1 Out-of-frame Inter-chr q34.3 Oncogene Tumor suppressor gene Seq+ 90307 ChimerSeq TCGA FAWG TCGA_RNA-Seq TGFBRAP1-CCDC146 TGFBRAP1 chr2 105296356 - CCDC146 chr7 77236947 + Exonic hg38 HNSC TCGA-CV-5431-01A 1 3 In-Frame Inter-chr q12.2 q11.23 90308 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-CTTN ERBB2 chr17 39715939 + CTTN chr11 70422940 + Exonic hg38 HNSC TCGA-CV-5431-01A 1 1 In-Frame Inter-chr q12 Oncogene q13.3 Seq+ 90309 ChimerSeq TCGA FAWG TCGA_RNA-Seq PFKFB4-COL7A1 PFKFB4 chr3 48521986 - COL7A1 chr3 48571278 - Exonic hg38 HNSC TCGA-CV-5432-01A 1 5 In-Frame Intra-chr p21.31 p21.31 90310 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRZ1-TSPAN33 PTPRZ1 chr7 122055087 + TSPAN33 chr7 129161679 + Exonic hg38 HNSC TCGA-CV-5434-01A 14 83 In-Frame Intra-chr q31.32 q32.1 Seq+ 90311 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK1-DCC ROCK1 chr18 21006351 - DCC chr18 53386043 + Exonic hg38 HNSC TCGA-CV-5434-01A 10 44 In-Frame Intra-chr q11.1 AGC:DMPK q21.2 Oncogene Tumor suppressor gene Seq+ 90312 ChimerSeq TCGA FAWG TCGA_RNA-Seq NLK-RAD51D NLK chr17 28043331 + RAD51D chr17 35106481 - Exonic hg38 HNSC TCGA-CV-5434-01A 3 10 Out-of-frame Intra-chr q11.2 CMGC:MAPK q12 Seq+ 90313 ChimerSeq TCGA FAWG TCGA_RNA-Seq NLK-RFFL NLK chr17 28043331 + RFFL chr17 35106481 - Exonic hg38 HNSC TCGA-CV-5434-01A 3 10 CDS-5'UTR Intra-chr q11.2 CMGC:MAPK q12 90314 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLX4IP-SLC24A3 SLX4IP chr20 10458231 + SLC24A3 chr20 19280959 + Exonic hg38 HNSC TCGA-CV-5436-01A 2 12 Out-of-frame Intra-chr p12.2 p11.23 Seq+ 90315 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHR-TSPAN13 AHR chr7 17310123 + TSPAN13 chr7 16783417 + Exonic hg38 HNSC TCGA-CV-5436-01A 1 3 Out-of-frame Intra-chr p21.1 Tumor suppressor gene Transcription factor p21.1 Tumor suppressor gene Seq+ 90316 ChimerSeq TCGA FAWG TCGA_RNA-Seq FHOD3-MS4A15 FHOD3 chr18 36687178 + MS4A15 chr11 60763706 + Exonic hg38 HNSC TCGA-CV-5440-01A 3 12 CDS-5'UTR Inter-chr q12.2 q12.2 Seq+ 90317 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTD1-RALGAPA2 DTD1 chr20 18628233 + RALGAPA2 chr20 20546832 - Exonic hg38 HNSC TCGA-CV-5440-01A 3 6 In-Frame Intra-chr p11.23 p11.23 Seq+ 90318 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP8-MYEF2 USP8 chr15 50490525 + MYEF2 chr15 48168839 - Exonic hg38 HNSC TCGA-CV-5440-01A 2 9 In-Frame Intra-chr q21.2 q21.1 Seq+ 90319 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX1-C3orf67 DDX1 chr2 15596763 + C3orf67 chr3 58806456 - Exonic hg38 HNSC TCGA-CV-5441-01A 1 1 In-Frame Inter-chr p24.3 p14.2 90320 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKP1-JUP PKP1 chr1 201332903 + JUP chr17 41755174 - Exonic hg38 HNSC TCGA-CV-5442-01A 3 7 Out-of-frame Inter-chr q32.1 q21.2 Tumor suppressor gene 90321 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITCH-DEFB118 ITCH chr20 34471515 + DEFB118 chr20 31372857 + Exonic hg38 HNSC TCGA-CV-5443-01A 47 258 Out-of-frame Intra-chr q11.22 q11.21 Seq+ 90322 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC26A11-OAF SLC26A11 chr17 80237594 + OAF chr11 120228868 + Exonic hg38 HNSC TCGA-CV-5443-01A 2 11 In-Frame Inter-chr q25.3 q23.3 Seq+ 90323 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLGRKT-CD274 PLGRKT chr9 5431897 - CD274 chr9 5456100 + Exonic hg38 HNSC TCGA-CV-5443-01A 1 10 CDS-5'UTR Intra-chr p24.1 p24.1 Oncogene 90324 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESYT2-CNTNAP2 ESYT2 chr7 158748194 - CNTNAP2 chr7 147043907 + Exonic hg38 HNSC TCGA-CV-5444-01A 1 20 CDS-3'UTR Intra-chr q36.3 Tumor suppressor gene 90325 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRR4-SPSB2 PRR4 chr12 11121010 - SPSB2 chr12 6882287 - Exonic hg38 HNSC TCGA-CV-5444-01A 2 9 Out-of-frame Intra-chr p13.31 Seq+ 90326 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACAP2-IQCG ACAP2 chr3 195442795 - IQCG chr3 197914042 - Exonic hg38 HNSC TCGA-CV-5970-01A 1 26 Out-of-frame Intra-chr q29 q29 Seq+ 90327 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSPB11-ZCCHC11 HSPB11 chr1 53939985 - ZCCHC11 chr1 52497183 - Exonic hg38 HNSC TCGA-CV-5970-01A 1 6 Out-of-frame Intra-chr p32.3 p32.3 Seq+ 90328 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYBPC2-DES MYBPC2 chr19 50452003 + DES chr2 219421340 + Exonic hg38 HNSC TCGA-CV-5971-01A 1 9 In-Frame Inter-chr q13.33 q35 90329 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFYA-TSPO2 NFYA chr6 41094497 + TSPO2 chr6 41042966 + Exonic hg38 HNSC TCGA-CV-5973-01A 4 36 CDS-5'UTR Intra-chr p21.1 Transcription factor p21.1 Seq+ 90330 ChimerSeq TCGA FAWG TCGA_RNA-Seq OTUB1-RPS6KA4 OTUB1 chr11 63988752 + RPS6KA4 chr11 64365301 + Exonic hg38 HNSC TCGA-CV-5973-01A 3 14 In-Frame Intra-chr q13.1 q13.1 Seq+ 90331 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADD1-ADK ADD1 chr4 2844024 + ADK chr10 74394141 + Exonic hg38 HNSC TCGA-CV-5978-01A 7 30 5'UTR-5'UTR Inter-chr p16.3 q22.2 Seq+ 90332 ChimerSeq TCGA FAWG TCGA_RNA-Seq GABARAP-GPS2 GABARAP chr17 7241424 - GPS2 chr17 7314659 - Exonic hg38 HNSC TCGA-CV-5979-01A 28 63 Out-of-frame Intra-chr p13.1 Tumor suppressor gene p13.1 Seq+ 90333 ChimerSeq TCGA FAWG TCGA_RNA-Seq IPO9-CSRP1 IPO9 chr1 201871327 + CSRP1 chr1 201496304 - Exonic hg38 HNSC TCGA-CV-5979-01A 1 1 CDS-5'UTR Intra-chr q32.1 q32.1 90334 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALY-ASXL1 RALY chr20 34031604 + ASXL1 chr20 32428128 + Exonic hg38 HNSC TCGA-CV-6433-01A 3 12 5'UTR-CDS Intra-chr q11.22 q11.21 Oncogene Tumor suppressor gene Seq+ 90335 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSPB11-NDC1 HSPB11 chr1 53923904 - NDC1 chr1 53772489 - Exonic hg38 HNSC TCGA-CV-6441-01A 5 54 In-Frame Intra-chr p32.3 p32.3 Seq+ 90336 ChimerSeq TCGA FAWG TCGA_RNA-Seq OPA3-EML2 OPA3 chr19 45584623 - EML2 chr19 45642352 - Exonic hg38 HNSC TCGA-CV-6441-01A 3 30 In-Frame Intra-chr q13.32 q13.32 Seq+ 90337 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLNS1A-DCBLD1 CLNS1A chr11 77637590 - DCBLD1 chr6 117532260 + Exonic hg38 HNSC TCGA-CV-6933-01A 2 1 Out-of-frame Inter-chr q14.1 q22.1 90338 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAD2-ERBB4 ATAD2 chr8 123369058 - ERBB4 chr2 211665477 - Exonic hg38 HNSC TCGA-CV-6935-01A 5 24 Out-of-frame Inter-chr q24.13 q34 Oncogene Tumor suppressor gene Seq+ 90339 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMAN2L-FAM178B LMAN2L chr2 96734409 - FAM178B chr2 96929320 - Exonic hg38 HNSC TCGA-CV-6936-01A 2 29 In-Frame Intra-chr q11.2 q11.2 Seq+ 90340 ChimerSeq TCGA FAWG TCGA_RNA-Seq PI4KA-CCDC74BP1 PI4KA chr22 20793193 - CCDC74BP1 chr22 20592100 - Exonic hg38 HNSC TCGA-CV-6937-01A 48 193 Out-of-frame Intra-chr q11.21 q11.21 90341 ChimerSeq TCGA FAWG TCGA_RNA-Seq FKBP1A-CDS2 FKBP1A chr20 1392834 - CDS2 chr20 5189067 + Exonic hg38 HNSC TCGA-CV-6937-01A 10 64 Out-of-frame Intra-chr p13 p12.3 Seq+ 90342 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP11B-TFRC ATP11B chr3 182869331 + TFRC chr3 196058632 - Exonic hg38 HNSC TCGA-CV-6937-01A 4 30 In-Frame Intra-chr q26.33 Oncogene q29 Seq+ 90343 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMPD4P1-KLHL22 SMPD4P1 chr22 20613663 - KLHL22 chr22 20471515 - Exonic hg38 HNSC TCGA-CV-6937-01A 6 10 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 90344 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1549L-WARS2 KIAA1549L chr11 33574873 + WARS2 chr1 119076607 - Exonic hg38 HNSC TCGA-CV-6937-01A 4 10 Out-of-frame Inter-chr p13 p12 Seq+ 90345 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL22-KIAA1549L KLHL22 chr22 20464858 - KIAA1549L chr11 33656012 + Exonic hg38 HNSC TCGA-CV-6937-01A 1 5 Out-of-frame Inter-chr q11.21 p13 90346 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBD5-ACVR2A MBD5 chr2 148021684 + ACVR2A chr2 147896301 + Exonic hg38 HNSC TCGA-CV-6938-01A 1 6 5'UTR-CDS Intra-chr q23.1 q22.3 Oncogene Seq+ 90347 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF718-PLEKHG4B ZNF718 chr4 131505 + PLEKHG4B chr5 139483 + Exonic hg38 HNSC TCGA-CV-6939-01A 4 28 Out-of-frame Inter-chr p16.3 Transcription factor p15.33 90348 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAALADL1-PATL1 NAALADL1 chr11 65045822 - PATL1 chr11 59654072 - Exonic hg38 HNSC TCGA-CV-6939-01A 1 14 In-Frame Intra-chr q13.1 q12.1 90349 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP5-HSCB LRP5 chr11 68446533 + HSCB chr22 28743882 + Exonic hg38 HNSC TCGA-CV-6939-01A 1 2 In-Frame Inter-chr q13.2 q12.1 90350 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAA25-SLC25A21 NAA25 chr12 112087683 - SLC25A21 chr14 36684925 - Exonic hg38 HNSC TCGA-CV-6940-01A 18 154 In-Frame Inter-chr q24.13 q13.3 Seq+ 90351 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM234A-LUC7L FAM234A chr16 249658 + LUC7L chr16 208188 - Exonic hg38 HNSC TCGA-CV-6940-01A 2 24 5'UTR-CDS Intra-chr p13.3 p13.3 90352 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGFR-ACADM EGFR chr7 55019365 + ACADM chr1 75732644 + Exonic hg38 HNSC TCGA-CV-6941-01A 32 172 In-Frame Inter-chr p11.2 TK:EGFR Oncogene p31.1 Seq+ 90353 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D22A-GCAT TBC1D22A chr22 46997709 + GCAT chr22 37810027 + Exonic hg38 HNSC TCGA-CV-6941-01A 5 27 In-Frame Intra-chr q13.31 q13.1 Seq+ 90354 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPP-P3H2 LPP chr3 188609844 + P3H2 chr3 189995442 - Exonic hg38 HNSC TCGA-CV-6941-01A 2 32 In-Frame Intra-chr q27.3 Oncogene q28 90355 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIMK2-ATXN10 LIMK2 chr22 31258426 + ATXN10 chr22 45806959 + Exonic hg38 HNSC TCGA-CV-6941-01A 3 22 In-Frame Intra-chr q12.2 TKL:LISK q13.31 Seq+ 90356 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP63-CYTH3 TP63 chr3 189808526 + CYTH3 chr7 6190531 - Exonic hg38 HNSC TCGA-CV-6941-01A 4 16 Out-of-frame Inter-chr q28 Tumor suppressor gene Transcription factor p22.1 Seq+ 90357 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELSR1-PACSIN2 CELSR1 chr22 46463707 - PACSIN2 chr22 42912157 - Exonic hg38 HNSC TCGA-CV-6941-01A 4 12 CDS-5'UTR Intra-chr q13.31 q13.2 Seq+ 90358 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN10-TUBGCP6 ATXN10 chr22 45740538 + TUBGCP6 chr22 50228028 - Exonic hg38 HNSC TCGA-CV-6941-01A 2 13 In-Frame Intra-chr q13.31 q13.33 Seq+ 90359 ChimerSeq TCGA FAWG TCGA_RNA-Seq FUS-PRSS36 FUS chr16 31184396 + PRSS36 chr16 31149731 - Exonic hg38 HNSC TCGA-CV-6941-01A 1 11 In-Frame Intra-chr p11.2 Tumor suppressor gene p11.2 Seq+ 90360 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3BP1-CACNA1I SH3BP1 chr22 37643788 + CACNA1I chr22 39661965 + Exonic hg38 HNSC TCGA-CV-6941-01A 2 7 In-Frame Intra-chr q13.1 q13.1 Seq+ 90361 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF2-SMG5 ARHGEF2 chr1 155978067 - SMG5 chr1 156274686 - Exonic hg38 HNSC TCGA-CV-6941-01A 1 9 5'UTR-CDS Intra-chr q22 q22 Seq+ 90362 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRR14L-SOX10 PRR14L chr22 31738387 - SOX10 chr22 37983868 - Exonic hg38 HNSC TCGA-CV-6941-01A 2 5 CDS-5'UTR Intra-chr q12.2 q13.1 Transcription factor Seq+ 90363 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCB1-ACR SMARCB1 chr22 23825415 + ACR chr22 50744061 + Exonic hg38 HNSC TCGA-CV-6941-01A 1 8 3'UTR-3'UTR Intra-chr q11.23 Oncogene Tumor suppressor gene Seq+ 90364 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC38-NACAP1 TTC38 chr22 46278661 + NACAP1 chr8 101367623 + Exonic hg38 HNSC TCGA-CV-6948-01A 33 136 Out-of-frame Inter-chr q13.31 q22.3 Seq+ 90365 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF410-LIN52 ZNF410 chr14 73909430 + LIN52 chr14 74198922 + Exonic hg38 HNSC TCGA-CV-6948-01A 5 38 In-Frame Intra-chr q24.3 Transcription factor q24.3 Seq+ 90366 ChimerSeq TCGA FAWG TCGA_RNA-Seq YME1L1-ANKRD26 YME1L1 chr10 27142387 - ANKRD26 chr10 26995147 - Exonic hg38 HNSC TCGA-CV-6948-01A 4 37 CDS-3'UTR Intra-chr p12.1 p12.1 Seq+ 90367 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGCR8-SGSM1 DGCR8 chr22 20080383 + SGSM1 chr22 24844897 + Exonic hg38 HNSC TCGA-CV-6948-01A 5 30 5'UTR-CDS Intra-chr q11.21 q11.23 Seq+ 90368 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKRN2-C12orf75 MKRN2 chr3 12576741 + C12orf75 chr12 105326970 + Exonic hg38 HNSC TCGA-CV-6948-01A 2 22 CDS-5'UTR Inter-chr p25.2 q23.3 Seq+ 90369 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERC1-GRK3 ERC1 chr12 991487 + GRK3 chr22 25604377 + Exonic hg38 HNSC TCGA-CV-6948-01A 1 17 5'UTR-5'UTR Inter-chr q12.1 90370 ChimerSeq TCGA FAWG TCGA_RNA-Seq LHPP-TANGO6 LHPP chr10 124484326 + TANGO6 chr16 69022828 + Exonic hg38 HNSC TCGA-CV-6948-01A 2 11 In-Frame Inter-chr q26.13 q22.1 Seq+ 90371 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS6-MYO3A MRPS6 chr21 34073745 + MYO3A chr10 26201265 + Exonic hg38 HNSC TCGA-CV-6948-01A 2 11 In-Frame Inter-chr q22.11 p12.1 STE:STE20 Seq+ 90372 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC5A3-MYO3A SLC5A3 chr21 34073745 + MYO3A chr10 26201265 + Exonic hg38 HNSC TCGA-CV-6948-01A 2 11 5'UTR-CDS Inter-chr q22.11 p12.1 STE:STE20 Seq+ 90373 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP10D-GABRB1 ATP10D chr4 47485519 + GABRB1 chr4 47031914 + Exonic hg38 HNSC TCGA-CV-6948-01A 1 3 5'UTR-CDS Intra-chr p12 p12 Seq+ 90374 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABL1-EXOSC2 ABL1 chr9 130714455 + EXOSC2 chr9 130695492 + Exonic hg38 HNSC TCGA-CV-6950-01A 2 11 Out-of-frame Intra-chr q34.12 TK:Abl Oncogene q34.12 Seq+ 90375 ChimerSeq TCGA FAWG TCGA_RNA-Seq AAMDC-SCGB1D1 AAMDC chr11 77842628 + SCGB1D1 chr11 62192056 + Exonic hg38 HNSC TCGA-CV-6951-01A 1 4 Out-of-frame Intra-chr q14.1 q12.3 90376 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP9X-MRPS31 USP9X chrX 41162877 + MRPS31 chr13 40729601 - Exonic hg38 HNSC TCGA-CV-6953-01A 3 61 Out-of-frame Inter-chr p11.4 Oncogene q14.11 Seq+ 90377 ChimerSeq TCGA FAWG TCGA_RNA-Seq S100A9-IGHG1 S100A9 chr1 153358361 + IGHG1 chr14 105742844 - Exonic hg38 HNSC TCGA-CV-6953-01A 3 59 Out-of-frame Inter-chr q21.3 q32.33 Seq+ 90378 ChimerSeq TCGA FAWG TCGA_RNA-Seq SELENOW-EHD2 SELENOW chr19 47780749 + EHD2 chr19 47716558 + Exonic hg38 HNSC TCGA-CV-6953-01A 3 34 CDS-5'UTR Intra-chr q13.33 q13.33 90379 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK1-B4GALT6 ROCK1 chr18 21110818 - B4GALT6 chr18 31666372 - Exonic hg38 HNSC TCGA-CV-6953-01A 5 18 Out-of-frame Intra-chr q11.1 AGC:DMPK q12.1 Seq+ 90380 ChimerSeq TCGA FAWG TCGA_RNA-Seq IKBKG-GAB3 IKBKG chrX 154547745 + GAB3 chrX 154716329 - Exonic hg38 HNSC TCGA-CV-6953-01A 3 21 5'UTR-CDS Intra-chr q28 q28 Seq+ 90381 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC9-PTK2 TRAPPC9 chr8 140405577 - PTK2 chr8 140686694 - Exonic hg38 HNSC TCGA-CV-6953-01A 3 19 In-Frame Intra-chr q24.3 q24.3 Seq+ 90382 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASCC1-MICU1 ASCC1 chr10 72196811 - MICU1 chr10 72408037 - Exonic hg38 HNSC TCGA-CV-6953-01A 2 3 In-Frame Intra-chr q22.1 q22.1 Seq+ 90383 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARD3-HTRA1 PARD3 chr10 34331117 - HTRA1 chr10 122488902 + Exonic hg38 HNSC TCGA-CV-6953-01A 1 6 In-Frame Intra-chr p11.21 q26.13 Tumor suppressor gene 90384 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPRR2E-SPRR2G SPRR2E chr1 153093553 - SPRR2G chr1 153150031 - Exonic hg38 HNSC TCGA-CV-6953-01A 1000 1000 Out-of-frame Intra-chr q21.3 q21.3 90385 ChimerSeq TCGA FAWG TCGA_RNA-Seq FHOD3-MOCOS FHOD3 chr18 36372744 + MOCOS chr18 36256968 + Exonic hg38 HNSC TCGA-CV-6954-01A 2 14 In-Frame Intra-chr q12.2 q12.2 Seq+ 90386 ChimerSeq TCGA FAWG TCGA_RNA-Seq FSCN1-FBXL18 FSCN1 chr7 5605384 + FBXL18 chr7 5438651 - Exonic hg38 HNSC TCGA-CV-6956-01A 6 21 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 90387 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPX2-RALY TPX2 chr20 31778984 + RALY chr20 34072066 + Exonic hg38 HNSC TCGA-CV-6959-01A 19 81 CDS-5'UTR Intra-chr q11.21 q11.22 Seq+ 90388 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMED10-TTLL5 TMED10 chr14 75176355 - TTLL5 chr14 75820007 + Exonic hg38 HNSC TCGA-CV-6961-01A 42 164 In-Frame Intra-chr q24.3 q24.3 Seq+ 90389 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUX1-THSD7A CUX1 chr7 102070417 + THSD7A chr7 11636961 - Exonic hg38 HNSC TCGA-CV-6961-01A 1 26 In-Frame Intra-chr q22.1 Tumor suppressor gene Transcription factor p21.3 Seq+ 90390 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTLL5-TMED10 TTLL5 chr14 75793100 + TMED10 chr14 75152143 - Exonic hg38 HNSC TCGA-CV-6961-01A 3 10 In-Frame Intra-chr q24.3 q24.3 90391 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCNT-POC1A PCNT chr21 46391376 + POC1A chr3 52075985 - Exonic hg38 HNSC TCGA-CV-6961-01A 1 3 Out-of-frame Inter-chr q22.3 p21.2 Seq+ 90392 ChimerSeq TCGA FAWG TCGA_RNA-Seq EED-HIKESHI EED chr11 86250449 + HIKESHI chr11 86306246 + Exonic hg38 HNSC TCGA-CV-6961-01A 1000 1000 Out-of-frame Intra-chr q14.2 Tumor suppressor gene q14.2 90393 ChimerSeq TCGA FAWG TCGA_RNA-Seq C6orf48-TRIM40 C6orf48 chr6 31837435 + TRIM40 chr6 30136412 + Exonic hg38 HNSC TCGA-CV-6962-01A 3 5 Out-of-frame Intra-chr Seq+ 90394 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX15-RBPJ DHX15 chr4 24548855 - RBPJ chr4 26386353 + Exonic hg38 HNSC TCGA-CV-7090-01A 6 21 5'UTR-5'UTR Intra-chr p15.2 p15.2 Transcription factor Seq+ 90395 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRP2-PARD3B NRP2 chr2 205683363 + PARD3B chr2 205553324 + Exonic hg38 HNSC TCGA-CV-7090-01A 5 14 Out-of-frame Intra-chr q33.3 q33.3 Seq+ 90396 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPR1-TOR3A XPR1 chr1 180836716 + TOR3A chr1 179097828 + Exonic hg38 HNSC TCGA-CV-7091-01A 25 111 CDS-3'UTR Intra-chr q25.3 q25.2 Seq+ 90397 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCTP1-TNC MCTP1 chr5 94923962 - TNC chr9 115021267 - Exonic hg38 HNSC TCGA-CV-7097-01A 9 18 In-Frame Inter-chr q15 q33.1 Seq+ 90398 ChimerSeq TCGA FAWG TCGA_RNA-Seq HELZ2-FNDC11 HELZ2 chr20 63572108 - FNDC11 chr20 63555654 + Exonic hg38 HNSC TCGA-CV-7097-01A 3 9 CDS-5'UTR Intra-chr q13.33 q13.33 90399 ChimerSeq TCGA FAWG TCGA_RNA-Seq LINC-GNGT1 LINC chr7 131052425 - GNGT1 chr7 93886506 + Exonic hg38 HNSC TCGA-CV-7099-01A 5 3 Out-of-frame Intra-chr q21.3 90400 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLST-AHSA1 DLST chr14 74889349 + AHSA1 chr14 77464598 + Exonic hg38 HNSC TCGA-CV-7099-01A 1 1 In-Frame Intra-chr q24.3 q24.3 90401 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806934 + TACC3 chr4 1739702 + Exonic hg38 HNSC TCGA-CV-7100-01A 567 2161 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 90402 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDLR-HSH2D LDLR chr19 11089615 + HSH2D chr19 16152552 + Exonic hg38 HNSC TCGA-CV-7100-01A 89 347 Out-of-frame Intra-chr p13.2 p13.11 Seq+ 90403 ChimerSeq TCGA FAWG TCGA_RNA-Seq SART1-CNTN5 SART1 chr11 65967821 + CNTN5 chr11 99819544 + Exonic hg38 HNSC TCGA-CV-7100-01A 6 21 Out-of-frame Intra-chr q13.1 q22.1 Seq+ 90404 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIOK3-TAF4B RIOK3 chr18 23453502 + TAF4B chr18 26389845 + Exonic hg38 HNSC TCGA-CV-7101-01A 11 34 In-Frame Intra-chr q11.2 Atypical:RIO q11.2 Seq+ 90405 ChimerSeq TCGA FAWG TCGA_RNA-Seq GGCT-ZNRF2 GGCT chr7 30498803 - ZNRF2 chr7 30323642 + Exonic hg38 HNSC TCGA-CV-7101-01A 2 13 Out-of-frame Intra-chr p14.3 p14.3 90406 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1XR1-KIAA1456 TBL1XR1 chr3 177197121 - KIAA1456 chr8 13006202 + Exonic hg38 HNSC TCGA-CV-7101-01A 1 9 Out-of-frame Inter-chr q26.32 p22 Seq+ 90407 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGRN1-SNX29 MGRN1 chr16 4665151 + SNX29 chr16 12477719 + Exonic hg38 HNSC TCGA-CV-7102-01A 4 11 In-Frame Intra-chr p13.3 p13.13 Seq+ 90408 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFL1-CDADC1 EFL1 chr15 82214717 - CDADC1 chr13 49274291 + Exonic hg38 HNSC TCGA-CV-7102-01A 3 9 In-Frame Inter-chr q25.2 q14.2 90409 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTL6A-ALG3 ACTL6A chr3 179570241 + ALG3 chr3 184245812 - Exonic hg38 HNSC TCGA-CV-7103-01A 36 129 In-Frame Intra-chr q26.33 q27.1 Seq+ 90410 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC19-ADK DNAJC19 chr3 180988023 - ADK chr10 74525256 + Exonic hg38 HNSC TCGA-CV-7103-01A 19 112 In-Frame Inter-chr q26.33 q22.2 Seq+ 90411 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD6-ABHD12B FRMD6 chr14 51491534 + ABHD12B chr14 50901829 + Exonic hg38 HNSC TCGA-CV-7103-01A 2 1 5'UTR-CDS Intra-chr q22.1 q22.1 90412 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA3-SNRPD1 LAMA3 chr18 23777619 + SNRPD1 chr18 21629062 + Exonic hg38 HNSC TCGA-CV-7104-01A 34 217 In-Frame Intra-chr q11.2 q11.2 Seq+ 90413 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD72-TLN1 CD72 chr9 35646403 - TLN1 chr9 35703676 - Exonic hg38 HNSC TCGA-CV-7104-01A 1 34 5'UTR-CDS Intra-chr p13.3 p13.3 90414 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTB-COL17A1 ACTB chr7 5529535 - COL17A1 chr10 104041344 - Exonic hg38 HNSC TCGA-CV-7104-01A 1 7 5'UTR-CDS Inter-chr p22.1 q25.1 Seq+ 90415 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD1-ATP2C1 PSMD1 chr2 231146356 + ATP2C1 chr3 130940630 + Exonic hg38 HNSC TCGA-CV-7177-01A 2 33 In-Frame Inter-chr q37.1 q22.1 Seq+ 90416 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIP2C-TECTA DIP2C chr10 472439 - TECTA chr11 121125302 + Exonic hg38 HNSC TCGA-CV-7177-01A 1 8 Out-of-frame Inter-chr p15.3 q23.3 Seq+ 90417 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A6-MAST2 SLC39A6 chr18 36114097 - MAST2 chr1 46019596 + Exonic hg38 HNSC TCGA-CV-7235-01A 20 34 Out-of-frame Inter-chr q12.2 p34.1 AGC:MAST Seq+ 90418 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACF1-AKIRIN1 MACF1 chr1 39105717 + AKIRIN1 chr1 38998171 + Exonic hg38 HNSC TCGA-CV-7235-01A 18 38 Out-of-frame Intra-chr p34.3 p34.3 Seq+ 90419 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAP1-KCNQ4 CAP1 chr1 40061812 + KCNQ4 chr1 40819875 + Exonic hg38 HNSC TCGA-CV-7235-01A 19 32 In-Frame Intra-chr p34.2 p34.2 90420 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP42-YAP1 ARHGAP42 chr11 100687832 + YAP1 chr11 102205893 + Exonic hg38 HNSC TCGA-CV-7235-01A 5 25 In-Frame Intra-chr q22.1 q22.1 Tumor suppressor gene 90421 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF385B-FKBP7 ZNF385B chr2 179861101 - FKBP7 chr2 178465931 - Exonic hg38 HNSC TCGA-CV-7235-01A 4 26 5'UTR-CDS Intra-chr q31.3 Transcription factor q31.2 Seq+ 90422 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAST2-CARD16 MAST2 chr1 46023980 + CARD16 chr11 105044658 - Exonic hg38 HNSC TCGA-CV-7235-01A 1 4 In-Frame Inter-chr p34.1 AGC:MAST q22.3 90423 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF216-MTHFD1L RNF216 chr7 5725324 - MTHFD1L chr6 151009819 + Exonic hg38 HNSC TCGA-CV-7236-01A 20 63 In-Frame Inter-chr p22.1 q25.1 Seq+ 90424 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTHFD1L-RNF216 MTHFD1L chr6 150972058 + RNF216 chr7 5721172 - Exonic hg38 HNSC TCGA-CV-7236-01A 2 12 In-Frame Inter-chr q25.1 p22.1 Seq+ 90425 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H3-TOP1MT ZC3H3 chr8 143536257 - TOP1MT chr8 143331339 - Exonic hg38 HNSC TCGA-CV-7238-01A 5 30 5'UTR-5'UTR Intra-chr q24.3 Seq+ 90426 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLIPR2-GALT GLIPR2 chr9 36150949 + GALT chr9 34646677 + Exonic hg38 HNSC TCGA-CV-7238-01A 2 4 5'UTR-5'UTR Intra-chr p13.3 p13.3 90427 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL5-SLC16A2 KLHL5 chr4 39045096 + SLC16A2 chrX 74520990 + Exonic hg38 HNSC TCGA-CV-7238-01A 2 3 5'UTR-CDS Inter-chr p14 q13.2 Seq+ 90428 ChimerSeq TCGA FAWG TCGA_RNA-Seq PER3-CAMTA1 PER3 chr1 7794008 + CAMTA1 chr1 7732448 + Exonic hg38 HNSC TCGA-CV-7242-01A 1 3 Out-of-frame Intra-chr p36.23 p36.31 Tumor suppressor gene Transcription factor 90429 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPUL1-BCKDHA HNRNPUL1 chr19 41281275 + BCKDHA chr19 41410637 + Exonic hg38 HNSC TCGA-CV-7245-01A 11 194 In-Frame Intra-chr q13.2 q13.2 90430 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRRM2-PRSS33 SRRM2 chr16 2760499 + PRSS33 chr16 2786604 - Exonic hg38 HNSC TCGA-CV-7247-01A 6 48 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 90431 ChimerSeq TCGA FAWG TCGA_RNA-Seq PANX1-HEPHL1 PANX1 chr11 94129493 + HEPHL1 chr11 94093501 + Exonic hg38 HNSC TCGA-CV-7247-01A 2 15 Out-of-frame Intra-chr q21 q21 Seq+ 90432 ChimerSeq TCGA FAWG TCGA_RNA-Seq INIP-C9orf84 INIP chr9 112716461 - C9orf84 chr9 111786035 - Exonic hg38 HNSC TCGA-CV-7247-01A 3 4 Out-of-frame Intra-chr q32 q31.3 90433 ChimerSeq TCGA FAWG TCGA_RNA-Seq CENPC-STAP1 CENPC chr4 67518156 - STAP1 chr4 67558752 + Exonic hg38 HNSC TCGA-CV-7248-01A 14 98 CDS-5'UTR Intra-chr q13.2 q13.2 Seq+ 90434 ChimerSeq TCGA FAWG TCGA_RNA-Seq DST-FBLN5 DST chr6 56503997 - FBLN5 chr14 91937201 - Exonic hg38 HNSC TCGA-CV-7248-01A 20 51 Out-of-frame Inter-chr p12.1 Oncogene q32.12 Seq+ 90435 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPP6-OSBPL3 MPP6 chr7 24623784 + OSBPL3 chr7 24863599 - Exonic hg38 HNSC TCGA-CV-7248-01A 6 23 Out-of-frame Intra-chr p15.3 p15.3 Seq+ 90436 ChimerSeq TCGA FAWG TCGA_RNA-Seq SACS-PHF3 SACS chr13 23358335 - PHF3 chr6 63778066 + Exonic hg38 HNSC TCGA-CV-7248-01A 2 6 CDS-3'UTR Inter-chr q12.12 q12 Seq+ 90437 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHCR24-PCNX2 DHCR24 chr1 54854037 - PCNX2 chr1 233179175 - Exonic hg38 HNSC TCGA-CV-7253-01A 105 338 In-Frame Intra-chr p32.3 q42.2 90438 ChimerSeq TCGA FAWG TCGA_RNA-Seq PXN-MSI1 PXN chr12 120221623 - MSI1 chr12 120343105 - Exonic hg38 HNSC TCGA-CV-7253-01A 43 192 CDS-3'UTR Intra-chr q24.23 q24.31 Seq+ 90439 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOL9-DNAJC11 NOL9 chr1 6554107 - DNAJC11 chr1 6681037 - Exonic hg38 HNSC TCGA-CV-7253-01A 7 30 In-Frame Intra-chr p36.31 p36.31 Tumor suppressor gene Seq+ 90440 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRHL2-TRIM13 GRHL2 chr8 101492789 + TRIM13 chr13 49997667 + Exonic hg38 HNSC TCGA-CV-7253-01A 5 24 CDS-5'UTR Inter-chr q22.3 Transcription factor q14.2 Tumor suppressor gene Seq+ 90441 ChimerSeq TCGA FAWG TCGA_RNA-Seq RITA1-GRHL2 RITA1 chr12 113187048 + GRHL2 chr8 101543241 + Exonic hg38 HNSC TCGA-CV-7253-01A 4 11 In-Frame Inter-chr q24.13 Tumor suppressor gene q22.3 Transcription factor 90442 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCNX2-TP73 PCNX2 chr1 233198939 - TP73 chr1 3682333 + Exonic hg38 HNSC TCGA-CV-7253-01A 2 3 CDS-5'UTR Intra-chr q42.2 p36.32 Tumor suppressor gene Transcription factor 90443 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK1G1-INTS2 CSNK1G1 chr15 64300319 - INTS2 chr17 61869988 - Exonic hg38 HNSC TCGA-CV-7253-01A 1 5 Out-of-frame Inter-chr q22.31 q23.2 90444 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRHL2-KCNRG GRHL2 chr8 101492789 + KCNRG chr13 50020214 + Exonic hg38 HNSC TCGA-CV-7253-01A 1 2 In-Frame Inter-chr q22.3 Transcription factor q14.2 Tumor suppressor gene Seq+ 90445 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3D-DMBT1 RAB3D chr19 11337172 - DMBT1 chr10 122635991 + Exonic hg38 HNSC TCGA-CV-7254-01A 1 9 Out-of-frame Inter-chr p13.2 q26.13 Tumor suppressor gene Seq+ 90446 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA3-ADHFE1 LAMA3 chr18 23810503 + ADHFE1 chr8 66460308 + Exonic hg38 HNSC TCGA-CV-7254-01A 1 5 In-Frame Inter-chr q11.2 q13.1 90447 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIRA-BCL2L13 HIRA chr22 19431440 - BCL2L13 chr22 17726677 + Exonic hg38 HNSC TCGA-CV-7255-01A 16 29 In-Frame Intra-chr q11.21 Tumor suppressor gene q11.21 Seq+ 90448 ChimerSeq TCGA FAWG TCGA_RNA-Seq AAK1-GALNT14 AAK1 chr2 69556860 - GALNT14 chr2 31147110 - Exonic hg38 HNSC TCGA-CV-7255-01A 2 9 CDS-5'UTR Intra-chr p13.3 Other:NAK p23.1 90449 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELSR2-SORT1 CELSR2 chr1 109273892 + SORT1 chr1 109312131 - Exonic hg38 HNSC TCGA-CV-7255-01A 1000 1000 Out-of-frame Intra-chr p13.3 p13.3 90450 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLIM4-SLC40A1 GOLIM4 chr3 168024526 - SLC40A1 chr2 189575320 - Exonic hg38 HNSC TCGA-CV-7261-01A 18 58 In-Frame Inter-chr q26.2 q32.2 Seq+ 90451 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF2-UBQLN4 ARHGEF2 chr1 155978365 - UBQLN4 chr1 156051857 - Exonic hg38 HNSC TCGA-CV-7261-01A 1 5 In-Frame Intra-chr q22 q22 90452 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCCA-FSIP2 PCCA chr13 100157340 + FSIP2 chr2 185828156 + Exonic hg38 HNSC TCGA-CV-7261-01A 1 5 Out-of-frame Inter-chr q32.3 q32.1 Seq+ 90453 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHROOM3-COL8A1 SHROOM3 chr4 76586469 + COL8A1 chr3 99744897 + Exonic hg38 HNSC TCGA-CV-7261-01A 1 2 CDS-5'UTR Inter-chr q21.1 q12.1 90454 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1orf21-LAMC1 C1orf21 chr1 184477603 + LAMC1 chr1 183116577 + Exonic hg38 HNSC TCGA-CV-7263-01A 3 4 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 90455 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO28-LYZL2 FBXO28 chr1 224114396 + LYZL2 chr10 30612900 - Exonic hg38 HNSC TCGA-CV-7406-01A 13 50 Out-of-frame Inter-chr q42.11 p11.23 Seq+ 90456 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE5A-C4orf3 PDE5A chr4 119596523 - C4orf3 chr4 119298779 - Exonic hg38 HNSC TCGA-CV-7406-01A 2 27 Out-of-frame Intra-chr q26 q26 Seq+ 90457 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRD-IDO1 PTPRD chr9 8733780 - IDO1 chr8 39913889 + Exonic hg38 HNSC TCGA-CV-7407-01A 11 68 CDS-5'UTR Inter-chr Oncogene Tumor suppressor gene p11.21 Seq+ 90458 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSHZ3-IFNL1 TSHZ3 chr19 31349180 - IFNL1 chr19 39296805 + Exonic hg38 HNSC TCGA-CV-7407-01A 7 10 Out-of-frame Intra-chr q12 Transcription factor q13.2 Seq+ 90459 ChimerSeq TCGA FAWG TCGA_RNA-Seq HACL1-METTL6 HACL1 chr3 15571668 - METTL6 chr3 15384187 - Exonic hg38 HNSC TCGA-CV-7407-01A 2 22 3'UTR-3'UTR Intra-chr p25.1 p25.1 Seq+ 90460 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R21-GTF2A1L PPP1R21 chr2 48511468 + GTF2A1L chr2 48669722 + Exonic hg38 HNSC TCGA-CV-7407-01A 4 5 In-Frame Intra-chr p16.3 p16.3 Seq+ 90461 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNBP1-MFSD14C FNBP1 chr9 129957360 - MFSD14C chr9 96918826 - Exonic hg38 HNSC TCGA-CV-7407-01A 1 12 CDS-3'UTR Intra-chr q34.11 q22.33 90462 ChimerSeq TCGA FAWG TCGA_RNA-Seq CALD1-AKR1B15 CALD1 chr7 134843971 + AKR1B15 chr7 134564598 + Exonic hg38 HNSC TCGA-CV-7407-01A 1 7 5'UTR-5'UTR Intra-chr q33 q33 Seq+ 90463 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC42BPA-PRKG1 CDC42BPA chr1 227080893 - PRKG1 chr10 51153164 + Exonic hg38 HNSC TCGA-CV-7407-01A 1 6 In-Frame Inter-chr q42.13 q11.23 Seq+ 90464 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAK2-KCTD18 TRAK2 chr2 201420417 - KCTD18 chr2 200507091 - Exonic hg38 HNSC TCGA-CV-7409-01A 7 57 CDS-5'UTR Intra-chr q33.1 q33.1 Seq+ 90465 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPP-CLSTN2 LPP chr3 188225527 + CLSTN2 chr3 140532324 + Exonic hg38 HNSC TCGA-CV-7410-01A 6 30 5'UTR-CDS Intra-chr q27.3 Oncogene q23 Seq+ 90466 ChimerSeq TCGA FAWG TCGA_RNA-Seq APP-TMEM50B APP chr21 26089943 - TMEM50B chr21 33468926 - Exonic hg38 HNSC TCGA-CV-7410-01A 1 33 CDS-5'UTR Intra-chr q21.3 90467 ChimerSeq TCGA FAWG TCGA_RNA-Seq KPNA4-IFT80 KPNA4 chr3 160565214 - IFT80 chr3 160384646 - Exonic hg38 HNSC TCGA-CV-7413-01A 7 21 CDS-5'UTR Intra-chr q25.33 q25.33 Seq+ 90468 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUPT7L-RBKS SUPT7L chr2 27660984 - RBKS chr2 27781788 - Exonic hg38 HNSC TCGA-CV-7413-01A 4 9 Out-of-frame Intra-chr p23.3 p23.2 Seq+ 90469 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3R3-ZSWIM5 PIK3R3 chr1 46131847 - ZSWIM5 chr1 45088237 - Exonic hg38 HNSC TCGA-CV-7414-01A 2 15 In-Frame Intra-chr p34.1 p34.1 Seq+ 90470 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA2-NDUFS4 ITGA2 chr5 52989532 + NDUFS4 chr5 53646233 + Exonic hg38 HNSC TCGA-CV-7414-01A 1 4 Out-of-frame Intra-chr q11.2 q11.2 90471 ChimerSeq TCGA FAWG TCGA_RNA-Seq BICD2-ASPN BICD2 chr9 92715253 - ASPN chr9 92466571 - Exonic hg38 HNSC TCGA-CV-7414-01A 1 3 In-Frame Intra-chr q22.31 q22.31 90472 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLTSCR1-ZNF793 GLTSCR1 chr19 47673762 + ZNF793 chr19 37548362 + Exonic hg38 HNSC TCGA-CV-7415-01A 8 15 Out-of-frame Intra-chr Tumor suppressor gene q13.12 Transcription factor Seq+ 90473 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCA2-DMRT1 SMARCA2 chr9 2088613 + DMRT1 chr9 916763 + Exonic hg38 HNSC TCGA-CV-7415-01A 4 28 In-Frame Intra-chr p24.3 Tumor suppressor gene p24.3 Transcription factor Seq+ 90474 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2IRD1-HSPB1 GTF2IRD1 chr7 74454176 + HSPB1 chr7 76303802 + Exonic hg38 HNSC TCGA-CV-7415-01A 2 1 5'UTR-CDS Intra-chr q11.23 Transcription factor q11.23 90475 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBGCP3-TFDP1 TUBGCP3 chr13 112565111 - TFDP1 chr13 113610996 + Exonic hg38 HNSC TCGA-CV-7416-01A 5 151 In-Frame Intra-chr q34 Transcription factor Seq+ 90476 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHST11-HCFC2 CHST11 chr12 104457514 + HCFC2 chr12 104066167 + Exonic hg38 HNSC TCGA-CV-7416-01A 2 4 In-Frame Intra-chr q23.3 q23.3 Seq+ 90477 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSPH3-MIF4GD RSPH3 chr6 158999712 - MIF4GD chr17 75268192 - Exonic hg38 HNSC TCGA-CV-7416-01A 1000 1000 Out-of-frame Inter-chr q25.3 q25.1 90478 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP5-CLPB LRP5 chr11 68312805 + CLPB chr11 72359008 - Exonic hg38 HNSC TCGA-CV-7418-01A 6 29 In-Frame Intra-chr q13.2 q13.4 Seq+ 90479 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPBL-SPEF2 NIPBL chr5 36958231 + SPEF2 chr5 35753624 + Exonic hg38 HNSC TCGA-CV-7418-01A 6 15 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 90480 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXK2-FN3KRP FOXK2 chr17 82582934 + FN3KRP chr17 82726480 + Exonic hg38 HNSC TCGA-CV-7418-01A 4 19 Out-of-frame Intra-chr q25.3 Transcription factor q25.3 Seq+ 90481 ChimerSeq TCGA FAWG TCGA_RNA-Seq PMS1-HIBCH PMS1 chr2 189873656 + HIBCH chr2 190246212 - Exonic hg38 HNSC TCGA-CV-7418-01A 2 4 In-Frame Intra-chr q32.2 Oncogene q32.2 90482 ChimerSeq TCGA FAWG TCGA_RNA-Seq EWSR1-ABR EWSR1 chr22 29273864 + ABR chr17 1125367 - Exonic hg38 HNSC TCGA-CV-7421-01A 14 48 CDS-5'UTR Inter-chr q12.2 p13.3 Seq+ 90483 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS41-AES VPS41 chr7 38789801 - AES chr19 3054194 - Exonic hg38 HNSC TCGA-CV-7421-01A 10 37 Out-of-frame Inter-chr p14.1 p13.3 Seq+ 90484 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLAT-EFCAB8 PLAT chr8 42207494 - EFCAB8 chr20 32943636 + Exonic hg38 HNSC TCGA-CV-7421-01A 5 15 5'UTR-CDS Inter-chr p11.21 q11.21 90485 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCR-TOM1 BCR chr22 23182239 + TOM1 chr22 35327271 + Exonic hg38 HNSC TCGA-CV-7421-01A 3 12 Out-of-frame Intra-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q12.3 Seq+ 90486 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLA2G6-SCARF2 PLA2G6 chr22 38142050 - SCARF2 chr22 20426020 - Exonic hg38 HNSC TCGA-CV-7421-01A 4 7 Out-of-frame Intra-chr q13.1 q11.21 Seq+ 90487 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPX2-DUSP15 TPX2 chr20 31760179 + DUSP15 chr20 31850676 - Exonic hg38 HNSC TCGA-CV-7421-01A 2 14 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 90488 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRABD-DDR2 TRABD chr22 50185976 + DDR2 chr1 162655211 + Exonic hg38 HNSC TCGA-CV-7422-01A 5 17 5'UTR-5'UTR Inter-chr q13.33 q23.3 TK:DDR Oncogene Tumor suppressor gene Seq+ 90489 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARFIP1-DCTD ARFIP1 chr4 152780226 + DCTD chr4 182915575 - Exonic hg38 HNSC TCGA-CV-7422-01A 2 1 5'UTR-5'UTR Intra-chr q31.3 q35.1 90490 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD42-PICALM ANKRD42 chr11 83198642 + PICALM chr11 85959060 - Exonic hg38 HNSC TCGA-CV-7422-01A 1 1 In-Frame Intra-chr q14.1 q14.2 90491 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTNB-CNOT4 DTNB chr2 25451548 - CNOT4 chr7 135422353 - Exonic hg38 HNSC TCGA-CV-7424-01A 6 16 In-Frame Inter-chr p23.3 q33 Seq+ 90492 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP2A2-TRIM22 AP2A2 chr11 926088 + TRIM22 chr11 5697248 + Exonic hg38 HNSC TCGA-CV-7424-01A 4 7 3'UTR-CDS Intra-chr p15.5 p15.4 Seq+ 90493 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPIL2-KIAA1671 PPIL2 chr22 21683257 + KIAA1671 chr22 25181699 + Exonic hg38 HNSC TCGA-CV-7424-01A 1 3 In-Frame Intra-chr q11.21 q11.23 Seq+ 90494 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKIB1-GNAI1 ANKIB1 chr7 92392292 + GNAI1 chr7 80199225 + Exonic hg38 HNSC TCGA-CV-7424-01A 1 1 In-Frame Intra-chr q21.2 q21.11 90495 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIX-RALGPS1 NFIX chr19 13025552 + RALGPS1 chr9 127166069 + Exonic hg38 HNSC TCGA-CV-7428-01A 7 26 In-Frame Inter-chr p13.13 Transcription factor q33.3 Seq+ 90496 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM51-KAZN TMEM51 chr1 15153954 + KAZN chr1 15043989 + Exonic hg38 HNSC TCGA-CV-7428-01A 7 15 5'UTR-CDS Intra-chr p36.21 p36.21 Seq+ 90497 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMU1-B4GALT1 SMU1 chr9 33068824 - B4GALT1 chr9 33104781 - Exonic hg38 HNSC TCGA-CV-7428-01A 3 6 CDS-3'UTR Intra-chr p21.1 p21.1 Seq+ 90498 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNA13-BMI1 GNA13 chr17 65053502 - BMI1 chr10 22328134 + Exonic hg38 HNSC TCGA-CV-7429-01A 9 51 Out-of-frame Inter-chr q24.1 p12.2 Seq+ 90499 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELP3-MYO5C ELP3 chr8 28158633 + MYO5C chr15 52208643 - Exonic hg38 HNSC TCGA-CV-7430-01A 9 33 In-Frame Inter-chr p21.1 q21.2 Seq+ 90500 ChimerSeq TCGA FAWG TCGA_RNA-Seq IRAK2-SRGAP3 IRAK2 chr3 10165048 + SRGAP3 chr3 9124917 - Exonic hg38 HNSC TCGA-CV-7430-01A 8 36 In-Frame Intra-chr p25.3 TKL:IRAK p25.3 Tumor suppressor gene Seq+ 90501 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDLIM1-SORBS1 PDLIM1 chr10 95263864 - SORBS1 chr10 95322021 - Exonic hg38 HNSC TCGA-CV-7430-01A 2 6 Out-of-frame Intra-chr q23.33 q24.1 Seq+ 90502 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMB3-NAMPT LAMB3 chr1 209622536 - NAMPT chr7 106254504 - Exonic hg38 HNSC TCGA-CV-7433-01A 3 11 Out-of-frame Inter-chr q32.2 q22.3 Seq+ 90503 ChimerSeq TCGA FAWG TCGA_RNA-Seq MFF-COL4A3 MFF chr2 227328789 + COL4A3 chr2 227282365 + Exonic hg38 HNSC TCGA-CV-7433-01A 4 6 5'UTR-CDS Intra-chr q36.3 q36.3 Seq+ 90504 ChimerSeq TCGA FAWG TCGA_RNA-Seq PQLC1-HSBP1L1 PQLC1 chr18 79943329 - HSBP1L1 chr18 79966612 + Exonic hg38 HNSC TCGA-CV-7434-01A 28 210 Out-of-frame Intra-chr q23 q23 Seq+ 90505 ChimerSeq TCGA FAWG TCGA_RNA-Seq OPA1-ATP13A4 OPA1 chr3 193593409 + ATP13A4 chr3 193459231 - Exonic hg38 HNSC TCGA-CV-7434-01A 8 24 In-Frame Intra-chr q29 q29 Seq+ 90506 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEDD4L-UBE2G1 NEDD4L chr18 58165861 + UBE2G1 chr17 4307123 - Exonic hg38 HNSC TCGA-CV-7435-01A 8 68 Out-of-frame Inter-chr q21.31 Tumor suppressor gene p13.2 Seq+ 90507 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPY19L1-SDK1 DPY19L1 chr7 35010468 - SDK1 chr7 3821450 + Exonic hg38 HNSC TCGA-CV-7437-01A 3 21 In-Frame Intra-chr p14.2 p22.2 Seq+ 90508 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R12A-TPGS2 PPP1R12A chr12 79934695 - TPGS2 chr18 36818973 - Exonic hg38 HNSC TCGA-CV-7438-01A 1 2 Out-of-frame Inter-chr q21.31 q12.2 90509 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2C-GTF2IRD1 KMT2C chr7 152205106 - GTF2IRD1 chr7 74589851 + Exonic hg38 HNSC TCGA-CV-7440-01A 29 35 In-Frame Intra-chr q36.1 Oncogene Tumor suppressor gene q11.23 Transcription factor 90510 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARG2-IPPK ARG2 chr14 67651346 + IPPK chr9 92652639 - Exonic hg38 HNSC TCGA-CV-7446-01A 4 12 5'UTR-CDS Inter-chr q24.1 q22.31 Seq+ 90511 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA2-EIF3E NCOA2 chr8 70403700 - EIF3E chr8 108203503 - Exonic hg38 HNSC TCGA-CV-7446-01A 1 1 5'UTR-CDS Intra-chr q13.3 Oncogene Transcription factor q23.1 90512 ChimerSeq TCGA FAWG TCGA_RNA-Seq IPPK-VTI1B IPPK chr9 92656456 - VTI1B chr14 67651481 - Exonic hg38 HNSC TCGA-CV-7446-01A 1000 1000 Out-of-frame Inter-chr q22.31 q24.1 Seq+ 90513 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGAP1-ZDBF2 PGAP1 chr2 196870941 - ZDBF2 chr2 206304717 + Exonic hg38 HNSC TCGA-CV-7568-01A 9 66 CDS-3'UTR Intra-chr q33.1 Seq+ 90514 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC2-FRMD4B EXOC2 chr6 488979 - FRMD4B chr3 69336586 - Exonic hg38 HNSC TCGA-CV-A45P-01A 1 28 3'UTR-CDS Inter-chr p25.3 p14.1 90515 ChimerSeq TCGA FAWG TCGA_RNA-Seq REV1-TMEM131 REV1 chr2 99489817 - TMEM131 chr2 97776018 - Exonic hg38 HNSC TCGA-CV-A45R-01A 2 7 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 90516 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC23B-ZCCHC7 SEC23B chr20 18525932 + ZCCHC7 chr9 37349357 + Exonic hg38 HNSC TCGA-CV-A45T-01A 8 26 In-Frame Inter-chr p11.23 p13.2 Seq+ 90517 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND1A-ENG DENND1A chr9 123557570 - ENG chr9 127818832 - Exonic hg38 HNSC TCGA-CV-A45T-01A 2 8 In-Frame Intra-chr q33.3 q34.11 Seq+ 90518 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZCCHC7-SEC23B ZCCHC7 chr9 37327834 + SEC23B chr20 18542296 + Exonic hg38 HNSC TCGA-CV-A45T-01A 1 6 In-Frame Inter-chr p13.2 p11.23 90519 ChimerSeq TCGA FAWG TCGA_RNA-Seq C11orf68-DRAP1 C11orf68 chr11 65919042 - DRAP1 chr11 65920019 + Exonic hg38 HNSC TCGA-CV-A45U-01A 21 32 Out-of-frame Intra-chr q13.1 q13.1 Transcription factor Seq+ 90520 ChimerSeq TCGA FAWG TCGA_RNA-Seq C14orf2-BRF1 C14orf2 chr14 103921470 - BRF1 chr14 105252579 - Exonic hg38 HNSC TCGA-CV-A45W-01A 14 33 Out-of-frame Intra-chr q32.33 q32.33 Tumor suppressor gene Seq+ 90521 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS53-ABR VPS53 chr17 697418 - ABR chr17 1100735 - Exonic hg38 HNSC TCGA-CV-A45X-01A 6 21 5'UTR-5'UTR Intra-chr Tumor suppressor gene p13.3 Seq+ 90522 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-RBM4 PPFIA1 chr11 70272436 + RBM4 chr11 66639700 + Exonic hg38 HNSC TCGA-CV-A45X-01A 6 20 5'UTR-5'UTR Intra-chr q13.3 q13.2 Tumor suppressor gene Seq+ 90523 ChimerSeq TCGA FAWG TCGA_RNA-Seq KREMEN1-MAPK1 KREMEN1 chr22 29073227 + MAPK1 chr22 21769320 - Exonic hg38 HNSC TCGA-CV-A45X-01A 2 4 Out-of-frame Intra-chr q12.1 q11.22 Oncogene Seq+ 90524 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAM9-ERCC8 ADAM9 chr8 39091346 + ERCC8 chr5 60928959 - Exonic hg38 HNSC TCGA-CV-A45X-01A 1 2 3'UTR-CDS Inter-chr q12.1 90525 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPS2-KCNC2 CAPS2 chr12 75371079 - KCNC2 chr12 75051317 - Exonic hg38 HNSC TCGA-CV-A45Y-01A 2 4 5'UTR-CDS Intra-chr q21.2 q21.1 Seq+ 90526 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOB3A-DAND5 MOB3A chr19 2078140 - DAND5 chr19 12973389 + Exonic hg38 HNSC TCGA-CV-A461-01A 6 13 Out-of-frame Intra-chr p13.3 p13.13 Seq+ 90527 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF462-RAD23B ZNF462 chr9 106984409 + RAD23B chr9 107306379 + Exonic hg38 HNSC TCGA-CV-A464-01A 2 15 In-Frame Intra-chr q31.2 Transcription factor q31.2 Tumor suppressor gene Seq+ 90528 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF267-GPR180 ZNF267 chr16 31885256 + GPR180 chr13 94621078 + Exonic hg38 HNSC TCGA-CV-A465-01A 5 36 In-Frame Inter-chr p11.2 Transcription factor q32.1 Seq+ 90529 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL30-FAM178B MRPL30 chr2 99181249 + FAM178B chr2 96960440 - Exonic hg38 HNSC TCGA-CV-A465-01A 8 2 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 90530 ChimerSeq TCGA FAWG TCGA_RNA-Seq YWHAZ-UBA1 YWHAZ chr8 100951929 - UBA1 chrX 47198803 + Exonic hg38 HNSC TCGA-CV-A6JD-01A 2 1 5'UTR-5'UTR Inter-chr q22.3 p11.3 90531 ChimerSeq TCGA FAWG TCGA_RNA-Seq HELZ-PSMD12 HELZ chr17 67151046 - PSMD12 chr17 67341052 - Exonic hg38 HNSC TCGA-CV-A6JE-01A 8 69 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 90532 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTTN-FHIT CTTN chr11 70422995 + FHIT chr3 60014075 - Exonic hg38 HNSC TCGA-CV-A6JN-01A 2 36 In-Frame Inter-chr q13.3 p14.2 Tumor suppressor gene Seq+ 90533 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGSF3-C1orf137 IGSF3 chr1 116666284 - C1orf137 chr1 116694759 + Exonic hg38 HNSC TCGA-CV-A6JU-01A 15 48 CDS-5'UTR Intra-chr p13.1 p13.1 Seq+ 90534 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCC5-OR4G4P ABCC5 chr3 183959733 - OR4G4P chr1 53282 + Exonic hg38 HNSC TCGA-CX-7082-01A 44 105 Out-of-frame Inter-chr q27.1 90535 ChimerSeq TCGA FAWG TCGA_RNA-Seq MUM1-DOT1L MUM1 chr19 1360258 + DOT1L chr19 2220108 + Exonic hg38 HNSC TCGA-CX-7082-01A 9 25 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p13.3 Oncogene Transcription factor 90536 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLG1-HRG DLG1 chr3 197104903 - HRG chr3 186673908 + Exonic hg38 HNSC TCGA-CX-7082-01A 5 25 3'UTR-CDS Intra-chr q29 Tumor suppressor gene q27.3 Tumor suppressor gene Seq+ 90537 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2S2-LETM2 EIF2S2 chr20 34112096 - LETM2 chr8 38387950 + Exonic hg38 HNSC TCGA-CX-7082-01A 3 5 CDS-5'UTR Inter-chr q11.22 p11.23 Seq+ 90538 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLX4IP-CDS2 SLX4IP chr20 10601819 + CDS2 chr20 5173523 + Exonic hg38 HNSC TCGA-CX-7082-01A 1 12 In-Frame Intra-chr p12.2 p12.3 90539 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPRR2G-SPRR2D SPRR2G chr1 153150014 - SPRR2D chr1 153040291 - Exonic hg38 HNSC TCGA-CX-7085-01A 1000 1000 Out-of-frame Intra-chr q21.3 q21.3 90540 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D10A-POLR3H TBC1D10A chr22 30299444 - POLR3H chr22 41540795 - Exonic hg38 HNSC TCGA-CX-7086-01A 8 20 In-Frame Intra-chr q12.2 q13.2 Seq+ 90541 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBX7-VPREB1 CBX7 chr22 39149789 - VPREB1 chr22 22244946 + Exonic hg38 HNSC TCGA-CX-7086-01A 4 14 Out-of-frame Intra-chr q13.1 q11.22 Seq+ 90542 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCR-UPB1 BCR chr22 23182239 + UPB1 chr22 24500107 + Exonic hg38 HNSC TCGA-CX-7086-01A 1 14 Out-of-frame Intra-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q11.23 Seq+ 90543 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBP2-NF2 OSBP2 chr22 30870682 + NF2 chr22 29642202 + Exonic hg38 HNSC TCGA-CX-7086-01A 1 12 In-Frame Intra-chr q12.2 q12.2 Oncogene Tumor suppressor gene 90544 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRCT1-SPRR2A CRCT1 chr1 152516010 + SPRR2A chr1 153056653 - Exonic hg38 HNSC TCGA-CX-7086-01A 1000 1000 Out-of-frame Intra-chr q21.3 q21.3 90545 ChimerSeq TCGA FAWG TCGA_RNA-Seq EMP2-SORL1 EMP2 chr16 10532204 - SORL1 chr11 121590488 + Exonic hg38 HNSC TCGA-CX-7219-01A 24 0 Out-of-frame Inter-chr p13.13 Tumor suppressor gene q24.1 90546 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFA7-PRKCG NDUFA7 chr19 8316496 - PRKCG chr19 53903073 + Exonic hg38 HNSC TCGA-D6-6515-01A 22 78 Out-of-frame Intra-chr p13.2 q13.42 Seq+ 90547 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFT20-VTN IFT20 chr17 28335340 - VTN chr17 28370270 - Exonic hg38 HNSC TCGA-D6-6517-01A 12 123 5'UTR-5'UTR Intra-chr q11.2 q11.2 Seq+ 90548 ChimerSeq TCGA FAWG TCGA_RNA-Seq DST-HMGN1 DST chr6 56458370 - HMGN1 chr21 39349057 - Exonic hg38 HNSC TCGA-D6-6517-01A 6 8 Out-of-frame Inter-chr p12.1 Oncogene q22.2 Seq+ 90549 ChimerSeq TCGA FAWG TCGA_RNA-Seq F3-C11orf80 F3 chr1 94541537 - C11orf80 chr11 66816053 + Exonic hg38 HNSC TCGA-D6-6517-01A 2 2 In-Frame Inter-chr p21.3 q13.2 90550 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMB3-NAB1 LAMB3 chr1 209622536 - NAB1 chr2 190673101 + Exonic hg38 HNSC TCGA-D6-6825-01A 15 19 Out-of-frame Inter-chr q32.2 q32.2 Seq+ 90551 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP16-CNBD2 USP16 chr21 29030773 + CNBD2 chr20 35972629 + Exonic hg38 HNSC TCGA-D6-6825-01A 4 27 In-Frame Inter-chr q21.3 q11.23 Seq+ 90552 ChimerSeq TCGA FAWG TCGA_RNA-Seq VGLL4-CHL1 VGLL4 chr3 11601833 - CHL1 chr3 377818 + Exonic hg38 HNSC TCGA-D6-6826-01A 11 102 In-Frame Intra-chr p25.2 p26.3 Seq+ 90553 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF130-TBC1D9B RNF130 chr5 180013061 - TBC1D9B chr5 179904812 - Exonic hg38 HNSC TCGA-D6-6826-01A 1 5 CDS-5'UTR Intra-chr q35.3 90554 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDK2-CDC42EP4 SDK2 chr17 73365258 - CDC42EP4 chr17 73286612 - Exonic hg38 HNSC TCGA-D6-6826-01A 1000 1000 CDS-5'UTR Intra-chr q25.1 q25.1 90555 ChimerSeq TCGA FAWG TCGA_RNA-Seq RB1-HTR2C RB1 chr13 48307406 + HTR2C chrX 114906589 + Exonic hg38 HNSC TCGA-D6-6827-01A 5 28 Out-of-frame Inter-chr q14.2 Oncogene Tumor suppressor gene q23 Seq+ 90556 ChimerSeq TCGA FAWG TCGA_RNA-Seq USPL1-RB1 USPL1 chr13 30618056 + RB1 chr13 48342599 + Exonic hg38 HNSC TCGA-D6-6827-01A 4 5 5'UTR-CDS Intra-chr q12.3 q14.2 Oncogene Tumor suppressor gene Seq+ 90557 ChimerSeq TCGA FAWG TCGA_RNA-Seq NLRC5-CYB5B NLRC5 chr16 57017188 + CYB5B chr16 69459093 + Exonic hg38 HNSC TCGA-D6-8568-01A 15 62 5'UTR-CDS Intra-chr q13 q22.1 Seq+ 90558 ChimerSeq TCGA FAWG TCGA_RNA-Seq OTUB1-GBA OTUB1 chr11 64001520 + GBA chr1 155238650 - Exonic hg38 HNSC TCGA-D6-8568-01A 1 2 3'UTR-5'UTR Inter-chr q13.1 90559 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL5A1-SPATA31D3 COL5A1 chr9 134772834 + SPATA31D3 chr9 81946468 + Exonic hg38 HNSC TCGA-D6-8569-01A 9 22 Out-of-frame Intra-chr q34.3 q21.32 Seq+ 90560 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMSAP1-SDCCAG3 CAMSAP1 chr9 135907000 - SDCCAG3 chr9 136407938 - Exonic hg38 HNSC TCGA-D6-8569-01A 2 23 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 90561 ChimerSeq TCGA FAWG TCGA_RNA-Seq RXRA-PRRC2B RXRA chr9 134421805 + PRRC2B chr9 131430090 + Exonic hg38 HNSC TCGA-D6-8569-01A 2 9 CDS-5'UTR Intra-chr q34.2 Transcription factor q34.13 Seq+ 90562 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYRK1A-IFNGR2 DYRK1A chr21 37367628 + IFNGR2 chr21 33421480 + Exonic hg38 HNSC TCGA-D6-A4Z9-01A 10 15 5'UTR-3'UTR Intra-chr q22.13 CMGC:DYRK Seq+ 90563 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIP2A-NRIP1 DIP2A chr21 46509376 + NRIP1 chr21 14968526 - Exonic hg38 HNSC TCGA-D6-A4Z9-01A 3 12 CDS-5'UTR Intra-chr q22.3 q21.1 Seq+ 90564 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRMT2-WRB PRMT2 chr21 46649739 + WRB chr21 39390698 + Exonic hg38 HNSC TCGA-D6-A4ZB-01A 3 8 Out-of-frame Intra-chr q22.3 q22.2 Seq+ 90565 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1S-PTPRO C1S chr12 7063067 + PTPRO chr12 15410280 + Exonic hg38 HNSC TCGA-D6-A4ZB-01A 2 5 5'UTR-5'UTR Intra-chr p13.31 p12.3 Seq+ 90566 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAPER-TMEM266 SCAPER chr15 76404524 - TMEM266 chr15 76134168 + Exonic hg38 HNSC TCGA-D6-A4ZB-01A 2 5 CDS-5'UTR Intra-chr q24.3 q24.2 90567 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGB5-FGL1 ITGB5 chr3 124901266 - FGL1 chr8 17885571 - Exonic hg38 HNSC TCGA-D6-A6EM-01A 1 6 5'UTR-5'UTR Inter-chr q21.2 p22 90568 ChimerSeq TCGA FAWG TCGA_RNA-Seq MINK1-ALOX12 MINK1 chr17 4833640 + ALOX12 chr17 7000336 + Exonic hg38 HNSC TCGA-D6-A6EN-01A 6 25 In-Frame Intra-chr p13.2 p13.1 Seq+ 90569 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM160A1-HPF1 FAM160A1 chr4 151409465 + HPF1 chr4 169753835 - Exonic hg38 HNSC TCGA-D6-A6EO-01A 6 32 5'UTR-CDS Intra-chr q31.3 q33 90570 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMC6-KANSL2 PSMC6 chr14 52711524 + KANSL2 chr12 48655060 - Exonic hg38 HNSC TCGA-D6-A6ES-01A 3 1 In-Frame Inter-chr q22.1 q13.11 90571 ChimerSeq TCGA FAWG TCGA_RNA-Seq STIP1-UBE2G1 STIP1 chr11 64186270 + UBE2G1 chr17 4307123 - Exonic hg38 HNSC TCGA-D6-A74Q-01A 16 45 Out-of-frame Inter-chr q13.1 p13.2 Seq+ 90572 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD12-RIOK3 ANKRD12 chr18 9137873 + RIOK3 chr18 23462964 + Exonic hg38 HNSC TCGA-D6-A74Q-01A 1 3 5'UTR-5'UTR Intra-chr p11.22 q11.2 Atypical:RIO 90573 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERP44-CHRDL2 ERP44 chr9 100052417 - CHRDL2 chr11 74718832 - Exonic hg38 HNSC TCGA-DQ-5624-01A 53 246 In-Frame Inter-chr q31.1 q13.4 Seq+ 90574 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC2A11-LLPH SLC2A11 chr22 23875241 + LLPH chr12 66124018 - Exonic hg38 HNSC TCGA-DQ-5624-01A 15 99 3'UTR-CDS Inter-chr q11.23 q14.3 Seq+ 90575 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALG10B-IGFBP6 ALG10B chr12 38318458 + IGFBP6 chr12 53102045 + Exonic hg38 HNSC TCGA-DQ-5624-01A 10 36 In-Frame Intra-chr q12 q13.13 Seq+ 90576 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALG10-IGFBP6 ALG10 chr12 34024159 + IGFBP6 chr12 53102045 + Exonic hg38 HNSC TCGA-DQ-5624-01A 1000 1000 In-Frame Intra-chr p11.1 q13.13 90577 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM11-UBAP1 TMEM11 chr17 21214091 - UBAP1 chr9 34220908 + Exonic hg38 HNSC TCGA-DQ-5629-01A 2 27 Out-of-frame Inter-chr p11.2 p13.3 Seq+ 90578 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R37-ZNF225 PPP1R37 chr19 45093527 + ZNF225 chr19 44115760 + Exonic hg38 HNSC TCGA-DQ-5629-01A 2 6 CDS-5'UTR Intra-chr q13.32 q13.31 Tumor suppressor gene Transcription factor 90579 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCLRE1C-OR7E26P DCLRE1C chr10 14949036 - OR7E26P chr10 15000006 - Exonic hg38 HNSC TCGA-DQ-5630-01A 8 32 Out-of-frame Intra-chr p13 p13 Seq+ 90580 ChimerSeq TCGA FAWG TCGA_RNA-Seq SWAP70-WEE1 SWAP70 chr11 9694286 + WEE1 chr11 9581532 + Exonic hg38 HNSC TCGA-DQ-5630-01A 2 10 Out-of-frame Intra-chr p15.4 p15.4 Seq+ 90581 ChimerSeq TCGA FAWG TCGA_RNA-Seq STN1-SH3PXD2A STN1 chr10 103882645 - SH3PXD2A chr10 103801362 - Exonic hg38 HNSC TCGA-DQ-5630-01A 1000 1000 3'UTR-CDS Intra-chr q24.33 q24.33 90582 ChimerSeq TCGA FAWG TCGA_RNA-Seq VSTM2L-RPRD1B VSTM2L chr20 37933589 + RPRD1B chr20 38089726 + Exonic hg38 HNSC TCGA-DQ-5631-01A 4 24 In-Frame Intra-chr q11.23 q11.23 Seq+ 90583 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAT1-CFAP97 FAT1 chr4 186633684 - CFAP97 chr4 185164179 - Exonic hg38 HNSC TCGA-DQ-7588-01A 15 653 In-Frame Intra-chr q35.2 Tumor suppressor gene q35.1 90584 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED24-PPP1R1B MED24 chr17 40026156 - PPP1R1B chr17 39635607 + Exonic hg38 HNSC TCGA-DQ-7589-01A 9 163 Out-of-frame Intra-chr q21.1 q12 Tumor suppressor gene Seq+ 90585 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX8-1 DHX8 chr17 43484185 + 1 chr17 41185321 - Exonic hg38 HNSC TCGA-DQ-7589-01A 4 40 5'UTR-5'UTR Intra-chr q21.31 90586 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCND1-FGF4 CCND1 chr11 69643991 + FGF4 chr11 69774127 - Exonic hg38 HNSC TCGA-DQ-7589-01A 4 11 In-Frame Intra-chr q13.3 Oncogene q13.3 Seq+ 90587 ChimerSeq TCGA FAWG TCGA_RNA-Seq HAUS6-PMPCA HAUS6 chr9 19094317 - PMPCA chr9 136412490 + Exonic hg38 HNSC TCGA-DQ-7589-01A 5 7 Out-of-frame Intra-chr p22.1 q34.3 Seq+ 90588 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC21-ELAVL2 ZDHHC21 chr9 14690337 - ELAVL2 chr9 23731125 - Exonic hg38 HNSC TCGA-DQ-7589-01A 2 16 5'UTR-CDS Intra-chr p22.3 p21.3 Seq+ 90589 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK14-ORC5 CDK14 chr7 90604249 + ORC5 chr7 104204234 - Exonic hg38 HNSC TCGA-DQ-7589-01A 2 14 In-Frame Intra-chr q21.13 q22.2 Seq+ 90590 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN1-ZNF788 ATXN1 chr6 16522627 - ZNF788 chr19 12135775 + Exonic hg38 HNSC TCGA-DQ-7589-01A 4 5 Out-of-frame Inter-chr p22.3 p13.2 Transcription factor 90591 ChimerSeq TCGA FAWG TCGA_RNA-Seq HACD3-RAB11A HACD3 chr15 65530718 + RAB11A chr15 65850864 + Exonic hg38 HNSC TCGA-DQ-7589-01A 3 4 CDS-5'UTR Intra-chr q22.31 q22.31 90592 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX30-CNTLN SNX30 chr9 112751157 + CNTLN chr9 17484295 + Exonic hg38 HNSC TCGA-DQ-7589-01A 1 12 In-Frame Intra-chr q32 p22.2 Seq+ 90593 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARG-FAM21EP PARG chr10 49908455 - FAM21EP chr10 50021467 - Exonic hg38 HNSC TCGA-DQ-7589-01A 1 9 3'UTR-3'UTR Intra-chr q11.23 q11.23 90594 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF1A-SLC12A7 TAF1A chr1 222584128 - SLC12A7 chr5 1085473 - Exonic hg38 HNSC TCGA-DQ-7589-01A 1 3 CDS-5'UTR Inter-chr q41 p15.33 Seq+ 90595 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-TLK2 BCAS3 chr17 61078529 + TLK2 chr17 62596585 + Exonic hg38 HNSC TCGA-DQ-7589-01A 1 2 In-Frame Intra-chr q23.2 q23.2 Other:TLK Seq+ 90596 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITX1-P4HA2 PITX1 chr5 135033713 - P4HA2 chr5 132218644 - Exonic hg38 HNSC TCGA-DQ-7590-01A 10 27 CDS-5'UTR Intra-chr q31.1 Transcription factor q31.1 Seq+ 90597 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKRN1-BRAF MKRN1 chr7 140459007 - BRAF chr7 140781693 - Exonic hg38 HNSC TCGA-DQ-7590-01A 1 3 In-Frame Intra-chr q34 q34 TKL:RAF Oncogene KB Pub Seq+ 90598 ChimerSeq TCGA FAWG TCGA_RNA-Seq KPNA6-RHCE KPNA6 chr1 32108134 + RHCE chr1 25370540 - Exonic hg38 HNSC TCGA-DQ-7591-01A 54 74 In-Frame Intra-chr p35.2 p36.11 Seq+ 90599 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDTC1-TMEM39B WDTC1 chr1 27234951 + TMEM39B chr1 32074951 + Exonic hg38 HNSC TCGA-DQ-7591-01A 6 52 5'UTR-5'UTR Intra-chr p36.11 p35.2 Seq+ 90600 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAD1L1-SERGEF MAD1L1 chr7 2149152 - SERGEF chr11 17788413 - Exonic hg38 HNSC TCGA-DQ-7591-01A 9 23 Out-of-frame Inter-chr p22.3 Tumor suppressor gene p15.1 Seq+ 90601 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARD6G-CHST1 PARD6G chr18 80202710 - CHST1 chr11 45652606 - Exonic hg38 HNSC TCGA-DQ-7591-01A 2 22 CDS-5'UTR Inter-chr q23 p11.2 Seq+ 90602 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF3B-NINL KIF3B chr20 32316874 + NINL chr20 25526598 - Exonic hg38 HNSC TCGA-DQ-7591-01A 4 7 CDS-5'UTR Intra-chr q11.21 p11.21 Seq+ 90603 ChimerSeq TCGA FAWG TCGA_RNA-Seq CS-MUCL1 CS chr12 56291631 - MUCL1 chr12 54858193 + Exonic hg38 HNSC TCGA-DQ-7591-01A 3 6 Out-of-frame Intra-chr q13.3 q13.2 Seq+ 90604 ChimerSeq TCGA FAWG TCGA_RNA-Seq GINS1-DEFB123 GINS1 chr20 25407895 + DEFB123 chr20 31450029 + Exonic hg38 HNSC TCGA-DQ-7591-01A 1 14 Out-of-frame Intra-chr p11.21 q11.21 90605 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC8-KDF1 DNAJC8 chr1 28232921 - KDF1 chr1 26952412 - Exonic hg38 HNSC TCGA-DQ-7591-01A 1 8 5'UTR-5'UTR Intra-chr p35.3 p36.11 90606 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAV1-HN1L NAV1 chr1 201649425 + HN1L chr16 1691843 + Exonic hg38 HNSC TCGA-DQ-7591-01A 1 7 Out-of-frame Inter-chr q32.1 90607 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHB2-RBP5 PHB2 chr12 6970196 - RBP5 chr12 7124730 - Exonic hg38 HNSC TCGA-DQ-7591-01A 2 3 Out-of-frame Intra-chr p13.31 p13.31 90608 ChimerSeq TCGA FAWG TCGA_RNA-Seq TASP1-AHCY TASP1 chr20 13528446 - AHCY chr20 34295585 - Exonic hg38 HNSC TCGA-DQ-7591-01A 1 7 3'UTR-CDS Intra-chr p12.1 q11.22 90609 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNRNP40-EPB41 SNRNP40 chr1 31289254 - EPB41 chr1 29039254 + Exonic hg38 HNSC TCGA-DQ-7591-01A 1 3 Out-of-frame Intra-chr p35.2 p35.3 Tumor suppressor gene Seq+ 90610 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHTKD1-CDC123 DHTKD1 chr10 12069187 + CDC123 chr10 12230948 + Exonic hg38 HNSC TCGA-DQ-7592-01A 13 65 Out-of-frame Intra-chr p14 p14 Seq+ 90611 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-LEMD3 FRS2 chr12 69470530 + LEMD3 chr12 65210926 + Exonic hg38 HNSC TCGA-DQ-7592-01A 2 25 5'UTR-CDS Intra-chr q15 q14.3 Seq+ 90612 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMO-STRIP2 SMO chr7 129209397 + STRIP2 chr7 129464612 + Exonic hg38 HNSC TCGA-DQ-7592-01A 1 2 In-Frame Intra-chr q32.1 Oncogene q32.1 90613 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR11-PDLIM1 WDR11 chr10 120905416 + PDLIM1 chr10 95271784 - Exonic hg38 HNSC TCGA-DQ-7593-01A 4 22 In-Frame Intra-chr q26.12 Tumor suppressor gene q23.33 Seq+ 90614 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACACA-CCDC192 ACACA chr17 37406262 - CCDC192 chr5 127797103 + Exonic hg38 HNSC TCGA-DQ-7594-01A 11 45 5'UTR-CDS Inter-chr q23.2 90615 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFE2L2-RFTN2 NFE2L2 chr2 177264532 - RFTN2 chr2 197572280 - Exonic hg38 HNSC TCGA-DQ-7594-01A 8 39 In-Frame Intra-chr q31.2 Oncogene Transcription factor q33.1 Seq+ 90616 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGPS-MOB4 AGPS chr2 177513908 + MOB4 chr2 197540111 + Exonic hg38 HNSC TCGA-DQ-7594-01A 4 4 In-Frame Intra-chr q31.2 q33.1 Seq+ 90617 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL8-RFTN2 METTL8 chr2 171392043 - RFTN2 chr2 197572280 - Exonic hg38 HNSC TCGA-DQ-7594-01A 1 13 Out-of-frame Intra-chr q31.1 q33.1 Seq+ 90618 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL21-SHANK2 MRPL21 chr11 68892890 - SHANK2 chr11 70473439 - Exonic hg38 HNSC TCGA-F7-7848-01A 43 166 Out-of-frame Intra-chr q13.3 q13.4 Seq+ 90619 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KB2-PCNX3 RPS6KB2 chr11 67429240 + PCNX3 chr11 65617940 + Exonic hg38 HNSC TCGA-F7-7848-01A 11 99 Out-of-frame Intra-chr q13.2 q13.1 90620 ChimerSeq TCGA FAWG TCGA_RNA-Seq C11orf80-TSGA10IP C11orf80 chr11 66759096 + TSGA10IP chr11 65945715 + Exonic hg38 HNSC TCGA-F7-7848-01A 4 20 In-Frame Intra-chr q13.2 q13.1 Seq+ 90621 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNLL1-COQ5 DYNLL1 chr12 120470104 + COQ5 chr12 120510123 - Exonic hg38 HNSC TCGA-F7-7848-01A 1 7 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 90622 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL16-DHX8 METTL16 chr17 2473524 - DHX8 chr17 43489449 + Exonic hg38 HNSC TCGA-F7-8298-01A 8 7 In-Frame Intra-chr p13.3 q21.31 Seq+ 90623 ChimerSeq TCGA FAWG TCGA_RNA-Seq HELZ-WIPF2 HELZ chr17 67239433 - WIPF2 chr17 40256391 + Exonic hg38 HNSC TCGA-F7-8298-01A 2 21 5'UTR-5'UTR Intra-chr q24.2 q21.2 Seq+ 90624 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASP1-TTC6 CASP1 chr11 105033064 - TTC6 chr14 37802094 + Exonic hg38 HNSC TCGA-F7-8489-01A 3 23 Out-of-frame Inter-chr q22.3 q21.1 Seq+ 90625 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFHX3-PMFBP1 ZFHX3 chr16 72889731 - PMFBP1 chr16 72120089 - Exonic hg38 HNSC TCGA-F7-8489-01A 1 2 Out-of-frame Intra-chr q22.3 Tumor suppressor gene Transcription factor q22.2 Seq+ 90626 ChimerSeq TCGA FAWG TCGA_RNA-Seq AEBP2-GYS2 AEBP2 chr12 19493986 + GYS2 chr12 21546470 - Exonic hg38 HNSC TCGA-F7-A50G-01A 24 93 Out-of-frame Intra-chr p12.3 Transcription factor p12.1 Seq+ 90627 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLSTN1-AS2 CLSTN1 chr1 9773272 - AS2 chr1 9672719 - Exonic hg38 HNSC TCGA-F7-A50I-01A 4 66 Out-of-frame Intra-chr p36.22 90628 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC47-USP37 CCDC47 chr17 63760914 - USP37 chr2 218553724 - Exonic hg38 HNSC TCGA-F7-A50I-01A 1 8 In-Frame Inter-chr q23.3 q35 Seq+ 90629 ChimerSeq TCGA FAWG TCGA_RNA-Seq UTP6-BCAS3 UTP6 chr17 31887236 - BCAS3 chr17 61034666 + Exonic hg38 HNSC TCGA-F7-A50I-01A 2 3 Out-of-frame Intra-chr q11.2 q23.2 Seq+ 90630 ChimerSeq TCGA FAWG TCGA_RNA-Seq KXD1-CRLF1 KXD1 chr19 18565021 + CRLF1 chr19 18573007 - Exonic hg38 HNSC TCGA-F7-A61V-01A 1 12 CDS-3'UTR Intra-chr p13.11 p13.11 90631 ChimerSeq TCGA FAWG TCGA_RNA-Seq C10orf76-LDB1 C10orf76 chr10 102056085 - LDB1 chr10 102111536 - Exonic hg38 HNSC TCGA-F7-A61W-01A 2 13 Out-of-frame Intra-chr q24.32 q24.32 Seq+ 90632 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKR1A1-AGO3 AKR1A1 chr1 45561878 + AGO3 chr1 36004341 + Exonic hg38 HNSC TCGA-F7-A61W-01A 3 6 Out-of-frame Intra-chr p34.1 p34.3 Seq+ 90633 ChimerSeq TCGA FAWG TCGA_RNA-Seq F3-C11orf80 F3 chr1 94541537 - C11orf80 chr11 66816053 + Exonic hg38 HNSC TCGA-F7-A620-01A 1 1 In-Frame Inter-chr p21.3 q13.2 90634 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPIG-SSB PPIG chr2 169614681 + SSB chr2 169805474 + Exonic hg38 HNSC TCGA-F7-A623-01A 5 27 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 90635 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAP1-KHDC1 SMAP1 chr6 70798737 + KHDC1 chr6 73292040 - Exonic hg38 HNSC TCGA-F7-A623-01A 5 11 Out-of-frame Intra-chr q13 q13 Seq+ 90636 ChimerSeq TCGA FAWG TCGA_RNA-Seq FUT10-RNF122 FUT10 chr8 33473064 - RNF122 chr8 33558771 - Exonic hg38 HNSC TCGA-F7-A623-01A 5 8 5'UTR-CDS Intra-chr p12 p12 Seq+ 90637 ChimerSeq TCGA FAWG TCGA_RNA-Seq BECN1-GPATCH8 BECN1 chr17 42813948 - GPATCH8 chr17 44438715 - Exonic hg38 HNSC TCGA-F7-A623-01A 4 7 CDS-5'UTR Intra-chr q21.31 Tumor suppressor gene q21.31 Seq+ 90638 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF13B-SLC25A21 KIF13B chr8 29099133 - SLC25A21 chr14 36875004 - Exonic hg38 HNSC TCGA-F7-A623-01A 1 14 In-Frame Inter-chr p12 q13.3 Seq+ 90639 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC2-CEP112 TANC2 chr17 63099357 + CEP112 chr17 65961598 - Exonic hg38 HNSC TCGA-F7-A623-01A 2 8 Out-of-frame Intra-chr q23.2 q24.1 Seq+ 90640 ChimerSeq TCGA FAWG TCGA_RNA-Seq VTI1A-ACSL5 VTI1A chr10 112464657 + ACSL5 chr10 112394918 + Exonic hg38 HNSC TCGA-F7-A623-01A 1 9 Out-of-frame Intra-chr q25.2 q25.2 Seq+ 90641 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBAC2-CLYBL UBAC2 chr13 99244624 + CLYBL chr13 99772824 + Exonic hg38 HNSC TCGA-H7-A6C4-01A 1 18 In-Frame Intra-chr q32.3 q32.3 Seq+ 90642 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWC2-CCDC110 WWC2 chr4 183099622 + CCDC110 chr4 185471049 - Exonic hg38 HNSC TCGA-H7-A6C4-01A 2 7 Out-of-frame Intra-chr q35.1 q35.1 Seq+ 90643 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND1A-NDUFA8 DENND1A chr9 123609436 - NDUFA8 chr9 122152408 - Exonic hg38 HNSC TCGA-H7-A76A-01A 4 17 In-Frame Intra-chr q33.3 q33.2 Seq+ 90644 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHRM3-FMN2 CHRM3 chr1 239827378 + FMN2 chr1 240472372 + Exonic hg38 HNSC TCGA-HD-7229-01A 4 16 5'UTR-CDS Intra-chr q43 q43 Seq+ 90645 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF21A-MIR670HG PHF21A chr11 46076754 - MIR670HG chr11 43569767 + Exonic hg38 HNSC TCGA-HD-7229-01A 4 6 CDS-5'UTR Intra-chr p11.2 Transcription factor p11.2 90646 ChimerSeq TCGA FAWG TCGA_RNA-Seq JAK2-GLDC JAK2 chr9 5029906 + GLDC chr9 6565429 - Exonic hg38 HNSC TCGA-HD-7229-01A 1 2 In-Frame Intra-chr p24.1 TK:JakA Oncogene p24.1 Seq+ 90647 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD2-PIBF1 NSD2 chr4 1871542 + PIBF1 chr13 72965274 + Exonic hg38 HNSC TCGA-HD-7753-01A 65 239 5'UTR-5'UTR Inter-chr p16.3 q21.33 90648 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARD6G-RFTN2 PARD6G chr18 80247277 - RFTN2 chr2 197572280 - Exonic hg38 HNSC TCGA-HD-7753-01A 17 102 In-Frame Inter-chr q23 q33.1 Seq+ 90649 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMC2-WASHC3 LAMC2 chr1 183231103 + WASHC3 chr12 102046119 - Exonic hg38 HNSC TCGA-HD-7753-01A 11 46 In-Frame Inter-chr q25.3 q23.2 90650 ChimerSeq TCGA FAWG TCGA_RNA-Seq FILIP1L-IMPG2 FILIP1L chr3 99876072 - IMPG2 chr3 101269573 - Exonic hg38 HNSC TCGA-HD-7753-01A 8 16 5'UTR-CDS Intra-chr q12.1 q12.3 Seq+ 90651 ChimerSeq TCGA FAWG TCGA_RNA-Seq VRK1-SAMD4A VRK1 chr14 96860735 + SAMD4A chr14 54702062 + Exonic hg38 HNSC TCGA-HD-7753-01A 1 3 Out-of-frame Intra-chr q32.2 CK1:VRK q22.2 Seq+ 90652 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGKV1OR2-IGKC IGKV1OR2 chr2 97355327 + IGKC chr2 88857683 - Exonic hg38 HNSC TCGA-HD-7831-01A 3 49 Out-of-frame Intra-chr p11.2 90653 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM49B-CCDC26 FAM49B chr8 129850835 - CCDC26 chr8 129399684 - Exonic hg38 HNSC TCGA-HD-7831-01A 3 17 CDS-3'UTR Intra-chr q24.21 q24.21 Seq+ 90654 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL6A2-MYH9 COL6A2 chr21 46122158 + MYH9 chr22 36299042 - Exonic hg38 HNSC TCGA-HD-7831-01A 1 7 In-Frame Inter-chr q22.3 q12.3 Oncogene Tumor suppressor gene 90655 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC24A-PCBD2 SEC24A chr5 134692657 + PCBD2 chr5 134959040 + Exonic hg38 HNSC TCGA-HD-7832-01A 1 3 In-Frame Intra-chr q31.1 q31.1 90656 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD2-PHTF2 NSD2 chr4 1901251 + PHTF2 chr7 77893608 + Exonic hg38 HNSC TCGA-HD-8224-01A 7 49 In-Frame Inter-chr p16.3 q11.23 90657 ChimerSeq TCGA FAWG TCGA_RNA-Seq C15orf41-RYR3 C15orf41 chr15 36579961 + RYR3 chr15 33722715 + Exonic hg38 HNSC TCGA-HD-8224-01A 1 4 Out-of-frame Intra-chr q14 q13.3 Seq+ 90658 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPAL3-GRHL3 NIPAL3 chr1 24453504 + GRHL3 chr1 24364185 + Exonic hg38 HNSC TCGA-HD-8314-01A 31 64 Out-of-frame Intra-chr p36.11 p36.11 Transcription factor Seq+ 90659 ChimerSeq TCGA FAWG TCGA_RNA-Seq BPIFB2-MUC5B BPIFB2 chr20 33020587 + MUC5B chr11 1260626 + Exonic hg38 HNSC TCGA-HD-8314-01A 1 3 Out-of-frame Inter-chr q11.21 p15.5 90660 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPD2-NR4A2 GPD2 chr2 156476207 + NR4A2 chr2 156326000 - Exonic hg38 HNSC TCGA-HD-A634-01A 23 161 Out-of-frame Intra-chr q24.1 q24.1 Transcription factor Seq+ 90661 ChimerSeq TCGA FAWG TCGA_RNA-Seq NR4A2-GPD2 NR4A2 chr2 156330668 - GPD2 chr2 156476098 + Exonic hg38 HNSC TCGA-HD-A634-01A 4 30 5'UTR-5'UTR Intra-chr q24.1 Transcription factor q24.1 Seq+ 90662 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLPP1-SPEF2 PLPP1 chr5 55534572 - SPEF2 chr5 35806707 + Exonic hg38 HNSC TCGA-HD-A6HZ-01A 8 25 Out-of-frame Intra-chr q11.2 p13.2 90663 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTR3-SLC4A10 ACTR3 chr2 113955706 + SLC4A10 chr2 161620915 + Exonic hg38 HNSC TCGA-HD-A6HZ-01A 5 15 5'UTR-5'UTR Intra-chr q14.1 q24.2 90664 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRF-LRP12 PTPRF chr1 43623403 + LRP12 chr8 104509074 - Exonic hg38 HNSC TCGA-HD-A6HZ-01A 4 10 3'UTR-CDS Inter-chr p34.2 q22.3 90665 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR161-MPC2 GPR161 chr1 168136257 - MPC2 chr1 167920631 - Exonic hg38 HNSC TCGA-HD-A6HZ-01A 1 5 Out-of-frame Intra-chr q24.2 q24.2 90666 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNA2D1-CDK14 CACNA2D1 chr7 81982567 - CDK14 chr7 91045897 + Exonic hg38 HNSC TCGA-HD-A6HZ-01A 1 2 Out-of-frame Intra-chr q21.11 q21.13 90667 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF37-MIR205HG ARHGEF37 chr5 149581624 + MIR205HG chr1 209429181 + Exonic hg38 HNSC TCGA-HD-A6I0-01A 1 1 5'UTR-5'UTR Inter-chr q32 q32.2 90668 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1X-GPR143 TBL1X chrX 9501849 + GPR143 chrX 9743673 - Exonic hg38 HNSC TCGA-HL-7533-01A 15 69 5'UTR-CDS Intra-chr p22.31 p22.2 Seq+ 90669 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-RNF135 NF1 chr17 31169997 + RNF135 chr17 30997242 + Exonic hg38 HNSC TCGA-HL-7533-01A 7 24 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 90670 ChimerSeq TCGA FAWG TCGA_RNA-Seq IQGAP1-SPPL2A IQGAP1 chr15 90390873 + SPPL2A chr15 50707874 - Exonic hg38 HNSC TCGA-HL-7533-01A 8 7 Out-of-frame Intra-chr q26.1 q21.2 Seq+ 90671 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSAP-ASCC1 PSAP chr10 71851182 - ASCC1 chr10 72213331 - Exonic hg38 HNSC TCGA-IQ-7630-01A 1 12 Out-of-frame Intra-chr q22.1 q22.1 90672 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP5-ZNF317 LRP5 chr11 68312805 + ZNF317 chr19 9155925 + Exonic hg38 HNSC TCGA-IQ-7631-01A 2 11 5'UTR-5'UTR Inter-chr q13.2 p13.2 Transcription factor Seq+ 90673 ChimerSeq TCGA FAWG TCGA_RNA-Seq PWP2-TRAPPC10 PWP2 chr21 44124727 + TRAPPC10 chr21 44074324 + Exonic hg38 HNSC TCGA-IQ-7632-01A 3 5 In-Frame Intra-chr q22.3 q22.3 Seq+ 90674 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASNSD1-PMS1 ASNSD1 chr2 189661610 + PMS1 chr2 189843964 + Exonic hg38 HNSC TCGA-IQ-A61G-01A 6 32 5'UTR-CDS Intra-chr q32.2 q32.2 Oncogene Seq+ 90675 ChimerSeq TCGA FAWG TCGA_RNA-Seq EML3-INTS5 EML3 chr11 62605113 - INTS5 chr11 62649999 - Exonic hg38 HNSC TCGA-IQ-A61G-01A 2 6 In-Frame Intra-chr q12.3 q12.3 Seq+ 90676 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRHL2-CRMP1 GRHL2 chr8 101492789 + CRMP1 chr4 5828668 - Exonic hg38 HNSC TCGA-IQ-A61H-01A 74 210 Out-of-frame Inter-chr q22.3 Transcription factor p16.2 Seq+ 90677 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRHL2-SPAG1 GRHL2 chr8 101649499 + SPAG1 chr8 100162279 + Exonic hg38 HNSC TCGA-IQ-A61H-01A 1 17 CDS-5'UTR Intra-chr q22.3 Transcription factor q22.2 Seq+ 90678 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCHSD2-STARD10 FCHSD2 chr11 73083695 - STARD10 chr11 72793924 - Exonic hg38 HNSC TCGA-IQ-A61H-01A 3 5 CDS-5'UTR Intra-chr q13.4 q13.4 90679 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP6V1C1-VPS13B ATP6V1C1 chr8 103042407 + VPS13B chr8 99556450 + Exonic hg38 HNSC TCGA-IQ-A61H-01A 1 3 In-Frame Intra-chr q22.3 q22.2 90680 ChimerSeq TCGA FAWG TCGA_RNA-Seq CXCL1-AFP CXCL1 chr4 73869989 + AFP chr4 73453765 + Exonic hg38 HNSC TCGA-IQ-A61I-01A 2 14 In-Frame Intra-chr q13.3 q13.3 Seq+ 90681 ChimerSeq TCGA FAWG TCGA_RNA-Seq FANCC-ACOT11 FANCC chr9 95135346 - ACOT11 chr1 54584655 + Exonic hg38 HNSC TCGA-IQ-A61I-01A 1 8 In-Frame Inter-chr q22.32 Oncogene p32.3 90682 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM5C-HUWE1 KDM5C chrX 53216074 - HUWE1 chrX 53680186 - Exonic hg38 HNSC TCGA-KU-A66T-01A 44 200 CDS-5'UTR Intra-chr p11.22 Oncogene p11.22 Seq+ 90683 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD3-TCEA1 NSD3 chr8 38304587 - TCEA1 chr8 53970463 - Exonic hg38 HNSC TCGA-KU-A66T-01A 22 223 Out-of-frame Intra-chr p11.23 Tumor suppressor gene q11.23 90684 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1B-NCKAP1 MYO1B chr2 191245626 + NCKAP1 chr2 182964808 - Exonic hg38 HNSC TCGA-KU-A66T-01A 5 17 5'UTR-CDS Intra-chr q32.3 q32.1 Seq+ 90685 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHM-KCNIP4 CHM chrX 85873052 - KCNIP4 chr4 20850667 - Exonic hg38 HNSC TCGA-KU-A66T-01A 1 4 Out-of-frame Inter-chr q21.2 p15.2 Seq+ 90686 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM171B-ZNF75D FAM171B chr2 186694411 + ZNF75D chrX 135252011 - Exonic hg38 HNSC TCGA-KU-A66T-01A 1 2 CDS-3'UTR Inter-chr q32.1 q26.3 Transcription factor 90687 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPSF6-COL16A1 CPSF6 chr12 69262562 + COL16A1 chr1 31652853 - Exonic hg38 HNSC TCGA-KU-A6H7-01A 70 296 3'UTR-CDS Inter-chr q15 p35.2 Seq+ 90688 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL16A1-CPSF6 COL16A1 chr1 31653599 - CPSF6 chr12 69269512 + Exonic hg38 HNSC TCGA-KU-A6H7-01A 20 120 CDS-3'UTR Inter-chr p35.2 q15 Seq+ 90689 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSPA8-VSTM5 HSPA8 chr11 123060593 - VSTM5 chr11 93821323 - Exonic hg38 HNSC TCGA-KU-A6H7-01A 1 28 Out-of-frame Intra-chr q24.1 q21 Seq+ 90690 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNC13B-UBE2R2 UNC13B chr9 35231219 + UBE2R2 chr9 33886881 + Exonic hg38 HNSC TCGA-MT-A51X-01A 7 31 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 90691 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2IRD1-SEM1 GTF2IRD1 chr7 74454176 + SEM1 chr7 96637306 - Exonic hg38 HNSC TCGA-MT-A51X-01A 4 5 5'UTR-5'UTR Intra-chr q11.23 Transcription factor q21.3 90692 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCAR2-PPP3CC CCAR2 chr8 22608065 + PPP3CC chr8 22540615 + Exonic hg38 HNSC TCGA-MT-A67A-01A 2 2 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.3 Tumor suppressor gene Seq+ 90693 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM17-PRKACB RBM17 chr10 6106238 + PRKACB chr1 84179177 + Exonic hg38 HNSC TCGA-MT-A67F-01A 9 48 In-Frame Inter-chr p15.1 p31.1 Seq+ 90694 ChimerSeq TCGA FAWG TCGA_RNA-Seq NT5DC1-SEC63 NT5DC1 chr6 116115770 + SEC63 chr6 107883146 - Exonic hg38 HNSC TCGA-MT-A7BN-01A 5 20 In-Frame Intra-chr q22.1 q21 Seq+ 90695 ChimerSeq TCGA FAWG TCGA_RNA-Seq PREP-PTPRK PREP chr6 105281746 - PTPRK chr6 128322310 - Exonic hg38 HNSC TCGA-MT-A7BN-01A 1 9 CDS-5'UTR Intra-chr q21 Tumor suppressor gene Seq+ 90696 ChimerSeq TCGA FAWG TCGA_RNA-Seq BPGM-AKR1B15 BPGM chr7 134646937 + AKR1B15 chr7 134568158 + Exonic hg38 HNSC TCGA-MT-A7BN-01A 1 2 5'UTR-5'UTR Intra-chr q33 q33 90697 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF529-FAM187B ZNF529 chr19 36572333 - FAM187B chr19 35225212 - Exonic hg38 HNSC TCGA-MT-A7BN-01A 1 2 In-Frame Intra-chr q13.12 Transcription factor q13.12 Seq+ 90698 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFPM2-ANXA13 ZFPM2 chr8 105634357 + ANXA13 chr8 123681359 - Exonic hg38 HNSC TCGA-MZ-A5BI-01A 28 69 Out-of-frame Intra-chr q22.3 Transcription factor q24.13 Seq+ 90699 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFE2L3-TPST1 NFE2L3 chr7 26183784 + TPST1 chr7 66352505 + Exonic hg38 HNSC TCGA-MZ-A5BI-01A 3 25 In-Frame Intra-chr p15.2 Transcription factor q11.21 Seq+ 90700 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBR5-TRAF3 UBR5 chr8 102257632 - TRAF3 chr14 102886189 + Exonic hg38 HNSC TCGA-MZ-A5BI-01A 3 5 In-Frame Inter-chr q22.3 Oncogene q32.32 Seq+ 90701 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUZ12-LRRC37B SUZ12 chr17 31988497 + LRRC37B chr17 32053266 + Exonic hg38 HNSC TCGA-MZ-A5BI-01A 1000 1000 Out-of-frame Intra-chr q11.2 Tumor suppressor gene q11.2 90702 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSD17B12-RPS6KB1 HSD17B12 chr11 43840064 + RPS6KB1 chr17 59910562 + Exonic hg38 HNSC TCGA-MZ-A6I9-01A 1 2 In-Frame Inter-chr p11.2 q23.1 Oncogene 90703 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOP1-CA10 TOP1 chr20 41029455 + CA10 chr17 51747818 - Exonic hg38 HNSC TCGA-MZ-A7D7-01A 12 11 Out-of-frame Inter-chr q12 Oncogene q22 Seq+ 90704 ChimerSeq TCGA FAWG TCGA_RNA-Seq JARID2-HFE JARID2 chr6 15452175 + HFE chr6 26091314 + Exonic hg38 HNSC TCGA-MZ-A7D7-01A 1 11 In-Frame Intra-chr p22.3 p22.2 Seq+ 90705 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-DPP3 UVRAG chr11 75912039 + DPP3 chr11 66492716 + Exonic hg38 HNSC TCGA-MZ-A7D7-01A 1 3 Out-of-frame Intra-chr q13.5 Tumor suppressor gene q13.2 90706 ChimerSeq TCGA FAWG TCGA_RNA-Seq NELL2-MUC19 NELL2 chr12 44607169 - MUC19 chr12 40397879 + Exonic hg38 HNSC TCGA-P3-A5Q6-01A 2 5 Out-of-frame Intra-chr q12 q12 90707 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2A-ATP5L KMT2A chr11 118436944 + ATP5L chr11 118431024 + Exonic hg38 HNSC TCGA-P3-A5Q6-01A 1 1 Out-of-frame Intra-chr q23.3 Oncogene Transcription factor q23.3 90708 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYH9-RBFOX2 MYH9 chr22 36282713 - RBFOX2 chr22 35746561 - Exonic hg38 HNSC TCGA-P3-A5QA-01A 30 48 CDS-5'UTR Intra-chr q12.3 Oncogene Tumor suppressor gene Seq+ 90709 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM160A1-MYO18B FAM160A1 chr4 151482648 + MYO18B chr22 25868320 + Exonic hg38 HNSC TCGA-P3-A5QA-01A 1 6 5'UTR-CDS Inter-chr q31.3 q12.1 Tumor suppressor gene 90710 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAG7-DNAH17 SPAG7 chr17 4967720 - DNAH17 chr17 78475833 - Exonic hg38 HNSC TCGA-P3-A5QE-01A 1 17 Out-of-frame Intra-chr p13.2 q25.3 Seq+ 90711 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPSF1-VPS28 CPSF1 chr8 144399588 - VPS28 chr8 144423922 - Exonic hg38 HNSC TCGA-P3-A5QF-01A 8 20 5'UTR-5'UTR Intra-chr q24.3 q24.3 Seq+ 90712 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB49-IGKJ5 ZBTB49 chr4 4290353 + IGKJ5 chr2 88860603 - Exonic hg38 HNSC TCGA-P3-A6SW-01A 13 0 Out-of-frame Inter-chr p16.3 Transcription factor p11.2 Seq+ 90713 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIDN-HMGB2P1 MIDN chr19 1255694 + HMGB2P1 chr19 1203272 + Exonic hg38 HNSC TCGA-P3-A6SW-01A 3 4 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 90714 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS10-ITPR3 RPS10 chr6 34424669 - ITPR3 chr6 33655766 + Exonic hg38 HNSC TCGA-P3-A6SX-01A 2 10 In-Frame Intra-chr p21.31 p21.31 Seq+ 90715 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMD9-VPS50 SAMD9 chr7 93114795 - VPS50 chr7 93239866 + Exonic hg38 HNSC TCGA-P3-A6SX-01A 2 6 5'UTR-5'UTR Intra-chr q21.2 Oncogene q21.2 90716 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2L3-BID UBE2L3 chr22 21611043 + BID chr22 17739488 - Exonic hg38 HNSC TCGA-P3-A6T0-01A 1 11 In-Frame Intra-chr q11.21 q11.21 Seq+ 90717 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRP2-PARD3B NRP2 chr2 205697721 + PARD3B chr2 205615456 + Exonic hg38 HNSC TCGA-P3-A6T3-01A 2 7 In-Frame Intra-chr q33.3 q33.3 Seq+ 90718 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRSS23-LGALS12 PRSS23 chr11 86823593 + LGALS12 chr11 63510463 + Exonic hg38 HNSC TCGA-P3-A6T5-01A 7 26 5'UTR-CDS Intra-chr q14.2 q12.3 Seq+ 90719 ChimerSeq TCGA FAWG TCGA_RNA-Seq APLP2-SLC22A10 APLP2 chr11 130070082 + SLC22A10 chr11 63362380 + Exonic hg38 HNSC TCGA-P3-A6T5-01A 4 2 CDS-3'UTR Intra-chr q24.3 q12.3 90720 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRYBG3-MYBPC1 CRYBG3 chr3 97900485 + MYBPC1 chr12 101614496 + Exonic hg38 HNSC TCGA-P3-A6T7-01A 4 4 Out-of-frame Inter-chr q11.2 q23.2 Seq+ 90721 ChimerSeq TCGA FAWG TCGA_RNA-Seq P4HB-CENPX P4HB chr17 81859181 - CENPX chr17 82019219 - Exonic hg38 HNSC TCGA-P3-A6T7-01A 1 4 Out-of-frame Intra-chr q25.3 q25.3 Transcription factor 90722 ChimerSeq TCGA FAWG TCGA_RNA-Seq RGMA-GLYATL1P3 RGMA chr15 93072916 - GLYATL1P3 chr11 59093934 + Exonic hg38 HNSC TCGA-P3-A6T7-01A 1 2 Out-of-frame Inter-chr q26.1 q12.1 90723 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-HSF2BP TMPRSS2 chr21 41471806 - HSF2BP chr21 43529962 - Exonic hg38 HNSC TCGA-P3-A6T8-01A 22 47 In-Frame Intra-chr q22.3 q22.3 Seq+ 90724 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC35G2-IL20RB SLC35G2 chr3 136819214 + IL20RB chr3 136980466 + Exonic hg38 HNSC TCGA-P3-A6T8-01A 8 43 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 90725 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF3A-TBC1D1 EIF3A chr10 119049801 - TBC1D1 chr4 38089932 + Exonic hg38 HNSC TCGA-P3-A6T8-01A 7 6 Out-of-frame Inter-chr q26.11 p14 Seq+ 90726 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGO1-SLC25A3P1 AGO1 chr1 35902337 + SLC25A3P1 chr1 53415524 - Exonic hg38 HNSC TCGA-P3-A6T8-01A 3 8 CDS-3'UTR Intra-chr p34.3 p32.3 Seq+ 90727 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNK1-KDM4B WNK1 chr12 754324 + KDM4B chr19 5016257 + Exonic hg38 HNSC TCGA-P3-A6T8-01A 1 7 CDS-5'UTR Inter-chr p13.33 p13.3 Seq+ 90728 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRA2B-HRH4 TRA2B chr3 185937825 - HRH4 chr18 24468788 + Exonic hg38 HNSC TCGA-QK-A64Z-01A 6 27 Out-of-frame Inter-chr q27.2 q11.2 Seq+ 90729 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM241-RIOK3 TMEM241 chr18 23384990 - RIOK3 chr18 23466133 + Exonic hg38 HNSC TCGA-QK-A64Z-01A 5 12 In-Frame Intra-chr q11.2 q11.2 Atypical:RIO Seq+ 90730 ChimerSeq TCGA FAWG TCGA_RNA-Seq YEATS2-HTR3C YEATS2 chr3 183762279 + HTR3C chr3 184055312 + Exonic hg38 HNSC TCGA-QK-A64Z-01A 5 8 In-Frame Intra-chr q27.1 q27.1 Seq+ 90731 ChimerSeq TCGA FAWG TCGA_RNA-Seq LENG1-NIT2 LENG1 chr19 54158282 - NIT2 chr3 100341073 + Exonic hg38 HNSC TCGA-QK-A652-01A 8 25 5'UTR-CDS Inter-chr q12.2 Tumor suppressor gene Seq+ 90732 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK39-PARVA STK39 chr2 168247228 - PARVA chr11 12473745 + Exonic hg38 HNSC TCGA-QK-A6IG-01A 2 5 In-Frame Inter-chr q24.3 p15.3 Seq+ 90733 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRR12-SNRNP70 PRR12 chr19 49601918 + SNRNP70 chr19 49101390 + Exonic hg38 HNSC TCGA-QK-A6IG-01A 1 3 In-Frame Intra-chr q13.33 Transcription factor q13.33 90734 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND5B-TSPAN9 DENND5B chr12 31495810 - TSPAN9 chr12 3083653 + Exonic hg38 HNSC TCGA-QK-A6IH-01A 1 1 CDS-5'UTR Intra-chr p11.21 p13.33 90735 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALY-PXMP4 RALY chr20 33994131 + PXMP4 chr20 33714736 - Exonic hg38 HNSC TCGA-QK-A6IJ-01A 9 21 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 90736 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLSCR1-MACROD2 PLSCR1 chr3 146517006 - MACROD2 chr20 16041201 + Exonic hg38 HNSC TCGA-QK-A6V9-01A 7 18 Out-of-frame Inter-chr q24 Transcription factor p12.1 Seq+ 90737 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDB1-STX3 DDB1 chr11 61323979 - STX3 chr11 59773211 + Exonic hg38 HNSC TCGA-QK-A6VB-01A 25 79 In-Frame Intra-chr q12.2 q12.1 Seq+ 90738 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBRM1-GLT8D1 PBRM1 chr3 52678500 - GLT8D1 chr3 52700496 - Exonic hg38 HNSC TCGA-QK-A6VC-01A 10 16 CDS-5'UTR Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 Seq+ 90739 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFE2L1-COPZ2 NFE2L1 chr17 48056598 + COPZ2 chr17 48033944 - Exonic hg38 HNSC TCGA-QK-A6VC-01A 1 7 In-Frame Intra-chr q21.32 Transcription factor q21.32 90740 ChimerSeq TCGA FAWG TCGA_RNA-Seq JUP-NT5C3B JUP chr17 41758715 - NT5C3B chr17 41825657 - Exonic hg38 HNSC TCGA-QK-A8Z7-01A 5 82 In-Frame Intra-chr q21.2 Tumor suppressor gene q21.2 Seq+ 90741 ChimerSeq TCGA FAWG TCGA_RNA-Seq NMRAL2P-FBXL6 NMRAL2P chr3 185968717 + FBXL6 chr8 144357121 - Exonic hg38 HNSC TCGA-QK-A8Z7-01A 4 17 5'UTR-5'UTR Inter-chr q27.2 q24.3 90742 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXA3-RGS6 FOXA3 chr19 45864525 + RGS6 chr14 72454528 + Exonic hg38 HNSC TCGA-QK-A8Z7-01A 4 5 Out-of-frame Inter-chr q13.32 Transcription factor q24.2 Seq+ 90743 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM165-KIAA1211 TMEM165 chr4 55424643 + KIAA1211 chr4 56272321 + Exonic hg38 HNSC TCGA-QK-A8Z8-01A 19 45 5'UTR-5'UTR Intra-chr q12 q12 Seq+ 90744 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB28-STAP1 RAB28 chr4 13460699 - STAP1 chr4 67590884 + Exonic hg38 HNSC TCGA-QK-A8Z8-01A 1 9 Out-of-frame Intra-chr p15.33 q13.2 Seq+ 90745 ChimerSeq TCGA FAWG TCGA_RNA-Seq SP140L-PDE6D SP140L chr2 230392229 + PDE6D chr2 231739202 - Exonic hg38 HNSC TCGA-QK-A8Z9-01B 10 33 5'UTR-CDS Intra-chr q37.1 Transcription factor q37.1 Seq+ 90746 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMOTL1-CEP295 AMOTL1 chr11 94729055 + CEP295 chr11 93721312 + Exonic hg38 HNSC TCGA-QK-A8Z9-01B 6 27 5'UTR-CDS Intra-chr q21 q21 90747 ChimerSeq TCGA FAWG TCGA_RNA-Seq HADHA-PRKAR1B HADHA chr2 26230192 - PRKAR1B chr7 596304 - Exonic hg38 HNSC TCGA-QK-A8Z9-01B 2 1 Out-of-frame Inter-chr p23.3 p22.3 90748 ChimerSeq TCGA FAWG TCGA_RNA-Seq TENM3-NR3C2 TENM3 chr4 182449083 + NR3C2 chr4 148194862 - Exonic hg38 HNSC TCGA-QK-A8Z9-01B 1 2 CDS-3'UTR Intra-chr q34.3 q31.23 Transcription factor 90749 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESYT2-ZNF595 ESYT2 chr7 158797942 - ZNF595 chr4 59430 + Exonic hg38 HNSC TCGA-QK-A8ZA-01A 9 23 In-Frame Inter-chr q36.3 p16.3 Transcription factor Seq+ 90750 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP11A-NAXD ATP11A chr13 112690455 + NAXD chr13 110622216 + Exonic hg38 HNSC TCGA-QK-A8ZA-01A 8 18 Out-of-frame Intra-chr q34 q34 90751 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRC2B-UHRF2 PRRC2B chr9 131394263 + UHRF2 chr9 6504593 + Exonic hg38 HNSC TCGA-QK-A8ZA-01A 4 12 5'UTR-5'UTR Intra-chr q34.13 p24.1 Tumor suppressor gene Seq+ 90752 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD9-PLEKHB1 BTBD9 chr6 38577600 - PLEKHB1 chr11 73660753 + Exonic hg38 HNSC TCGA-QK-A8ZA-01A 1 9 Out-of-frame Inter-chr p21.2 q13.4 Seq+ 90753 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZCCHC14-C16orf95 ZCCHC14 chr16 87460008 - C16orf95 chr16 87141103 - Exonic hg38 HNSC TCGA-QK-A8ZA-01A 1 5 CDS-3'UTR Intra-chr q24.2 q24.2 90754 ChimerSeq TCGA FAWG TCGA_RNA-Seq HEBP1-NCK1 HEBP1 chr12 12987152 - NCK1 chr3 136948259 + Exonic hg38 HNSC TCGA-QK-A8ZB-01A 35 189 Out-of-frame Inter-chr p13.1 q22.3 Seq+ 90755 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCK1-HEBP1 NCK1 chr3 136946295 + HEBP1 chr12 12975479 - Exonic hg38 HNSC TCGA-QK-A8ZB-01A 44 96 Out-of-frame Inter-chr q22.3 p13.1 Seq+ 90756 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL20RB-HEBP1 IL20RB chr3 136946295 + HEBP1 chr12 12975479 - Exonic hg38 HNSC TCGA-QK-A8ZB-01A 44 54 5'UTR-CDS Inter-chr q22.3 p13.1 Seq+ 90757 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDIA6-DKK3 PDIA6 chr2 10812678 - DKK3 chr11 11968487 - Exonic hg38 HNSC TCGA-QK-A8ZB-01A 23 48 Out-of-frame Inter-chr p25.1 p15.3 Tumor suppressor gene Seq+ 90758 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRWD3-FAM155A BRWD3 chrX 80791854 - FAM155A chr13 107170786 - Exonic hg38 HNSC TCGA-QK-A8ZB-01A 6 39 In-Frame Inter-chr q21.1 q33.3 Seq+ 90759 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4K3-EML4 MAP4K3 chr2 39378066 - EML4 chr2 42280850 + Exonic hg38 HNSC TCGA-QK-A8ZB-01A 2 4 In-Frame Intra-chr p22.1 p21 Oncogene Seq+ 90760 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPIN1-TIMM17A LPIN1 chr2 11820514 + TIMM17A chr1 201957511 + Exonic hg38 HNSC TCGA-QK-A8ZB-01A 1 4 Out-of-frame Inter-chr p25.1 q32.1 90761 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEAT1-CNIH2 NEAT1 chr11 65424014 + CNIH2 chr11 66283035 + Exonic hg38 HNSC TCGA-RS-A6TO-01A 85 152 5'UTR-5'UTR Intra-chr q13.1 q13.2 Seq+ 90762 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEAT1_3-CNIH2 NEAT1_3 chr11 65424014 + CNIH2 chr11 66283035 + Exonic hg38 HNSC TCGA-RS-A6TO-01A 85 98 Out-of-frame Intra-chr q13.1 q13.2 90763 ChimerSeq TCGA FAWG TCGA_RNA-Seq IPPK-IARS IPPK chr9 92669908 - IARS chr9 92256800 - Exonic hg38 HNSC TCGA-RS-A6TO-01A 2 19 In-Frame Intra-chr q22.31 q22.31 Seq+ 90764 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRFN3-GMFG LRFN3 chr19 35935782 + GMFG chr19 39333126 - Exonic hg38 HNSC TCGA-RS-A6TO-01A 2 2 5'UTR-CDS Intra-chr q13.12 q13.2 90765 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLS-MYO1B GLS chr2 190902026 + MYO1B chr2 191276887 + Exonic hg38 HNSC TCGA-RS-A6TO-01A 1 5 CDS-5'UTR Intra-chr q32.2 Tumor suppressor gene q32.3 Seq+ 90766 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO9B-SPC24 MYO9B chr19 17102557 + SPC24 chr19 11146430 - Exonic hg38 HNSC TCGA-RS-A6TO-01A 1 2 In-Frame Intra-chr p13.11 p13.2 90767 ChimerSeq TCGA FAWG TCGA_RNA-Seq RCBTB2-EPSTI1 RCBTB2 chr13 48510629 - EPSTI1 chr13 42926429 - Exonic hg38 HNSC TCGA-RS-A6TP-01A 17 58 In-Frame Intra-chr q14.2 q14.11 Seq+ 90768 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2K4-PSMD12 MAP2K4 chr17 12021001 + PSMD12 chr17 67357578 - Exonic hg38 HNSC TCGA-RS-A6TP-01A 8 15 Out-of-frame Intra-chr p12 STE:STE7 Oncogene Tumor suppressor gene q24.2 Seq+ 90769 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPC4AP-SOGA1 TRPC4AP chr20 35078046 - SOGA1 chr20 36804902 - Exonic hg38 HNSC TCGA-RS-A6TP-01A 6 15 In-Frame Intra-chr q11.22 q11.23 Seq+ 90770 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF3B-PXMP4 KIF3B chr20 32316874 + PXMP4 chr20 33714736 - Exonic hg38 HNSC TCGA-RS-A6TP-01A 3 2 In-Frame Intra-chr q11.21 q11.22 90771 ChimerSeq TCGA FAWG TCGA_RNA-Seq NINL-TTLL9 NINL chr20 25489244 - TTLL9 chr20 31937396 + Exonic hg38 HNSC TCGA-RS-A6TP-01A 1 8 Out-of-frame Intra-chr p11.21 q11.21 90772 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP9X-BLVRB USP9X chrX 41219231 + BLVRB chr19 40458545 - Exonic hg38 HNSC TCGA-T2-A6WZ-01A 21 106 In-Frame Inter-chr p11.4 Oncogene q13.2 Seq+ 90773 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACROD1-BAD MACROD1 chr11 64151239 - BAD chr11 64284376 - Exonic hg38 HNSC TCGA-T2-A6WZ-01A 5 15 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 90774 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC88C-RASGEF1B CCDC88C chr14 91305765 - RASGEF1B chr4 81915358 - Exonic hg38 HNSC TCGA-T2-A6X0-01A 19 97 CDS-5'UTR Inter-chr q32.12 q21.22 Seq+ 90775 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL2L13-CUX2 BCL2L13 chr22 17655832 + CUX2 chr12 111334441 + Exonic hg38 HNSC TCGA-T2-A6X0-01A 6 17 In-Frame Inter-chr q11.21 q24.11 Transcription factor Seq+ 90776 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAPP1-COL4A3 DAPP1 chr4 99863072 + COL4A3 chr2 227311786 + Exonic hg38 HNSC TCGA-T2-A6X0-01A 4 7 Out-of-frame Inter-chr q23 q36.3 Seq+ 90777 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPS8-RIN3 COPS8 chr2 237099038 + RIN3 chr14 92684987 + Exonic hg38 HNSC TCGA-T2-A6X0-01A 4 1 3'UTR-CDS Inter-chr q37.3 q32.12 90778 ChimerSeq TCGA FAWG TCGA_RNA-Seq UFSP2-EPHA4 UFSP2 chr4 185425866 - EPHA4 chr2 221501172 - Exonic hg38 HNSC TCGA-T2-A6X0-01A 3 5 Out-of-frame Inter-chr q35.1 q36.1 Seq+ 90779 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEX14-CASZ1 PEX14 chr1 10623116 + CASZ1 chr1 10796650 - Exonic hg38 HNSC TCGA-T2-A6X0-01A 1000 1000 Out-of-frame Intra-chr p36.22 p36.22 Transcription factor Seq+ 90780 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMAT5-NIPSNAP1 ZMAT5 chr22 29766872 - NIPSNAP1 chr22 29561862 - Exonic hg38 HNSC TCGA-T3-A92M-01A 5 11 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 90781 ChimerSeq TCGA FAWG TCGA_RNA-Seq FHOD3-MOCOS FHOD3 chr18 36298000 + MOCOS chr18 36256968 + Exonic hg38 HNSC TCGA-T3-A92M-01A 4 8 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 90782 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL1A-MYO16 OSBPL1A chr18 24239220 - MYO16 chr13 109120370 + Exonic hg38 HNSC TCGA-T3-A92M-01A 3 12 Out-of-frame Inter-chr q11.2 Seq+ 90783 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC142-M1AP CCDC142 chr2 74481223 - M1AP chr2 74581847 - Exonic hg38 HNSC TCGA-T3-A92M-01A 2 5 In-Frame Intra-chr p13.1 p13.1 Seq+ 90784 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCS1-TOR1B NCS1 chr9 130223159 + TOR1B chr9 129804073 + Exonic hg38 HNSC TCGA-T3-A92M-01A 2 4 Out-of-frame Intra-chr q34.11 q34.11 90785 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL2L13-VPS8 BCL2L13 chr22 17696210 + VPS8 chr3 184898565 + Exonic hg38 HNSC TCGA-T3-A92N-01A 4 11 In-Frame Inter-chr q11.21 q27.2 Seq+ 90786 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALT1-HSPC324 B4GALT1 chr9 33120419 - HSPC324 chr9 136649065 - Exonic hg38 HNSC TCGA-TN-A7HJ-01A 7 16 CDS-3'UTR Intra-chr p21.1 q34.3 90787 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNRHR2-S100A13 GNRHR2 chr1 145919900 + S100A13 chr1 153619038 - Exonic hg38 HNSC TCGA-TN-A7HJ-01A 4 11 5'UTR-CDS Intra-chr q21.1 q21.3 Seq+ 90788 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAAF5-SMYD3 DNAAF5 chr7 770618 + SMYD3 chr1 245929937 - Exonic hg38 HNSC TCGA-TN-A7HJ-01A 2 1 Out-of-frame Inter-chr p22.3 q44 Transcription factor 90789 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP5-KCNMB3 SENP5 chr3 196930900 + KCNMB3 chr3 179244693 - Exonic hg38 HNSC TCGA-TN-A7HJ-01A 1 5 Out-of-frame Intra-chr q29 q26.32 Seq+ 90790 ChimerSeq TCGA FAWG TCGA_RNA-Seq TULP4-FNDC1 TULP4 chr6 158498812 + FNDC1 chr6 159214945 + Exonic hg38 HNSC TCGA-UF-A719-01A 8 29 In-Frame Intra-chr q25.3 q25.3 Seq+ 90791 ChimerSeq TCGA FAWG TCGA_RNA-Seq RABEP1-RNF167 RABEP1 chr17 5332152 + RNF167 chr17 4940487 + Exonic hg38 HNSC TCGA-UF-A71A-01A 6 28 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 90792 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTK-BCKDHB TTK chr6 80014586 + BCKDHB chr6 80200934 + Exonic hg38 HNSC TCGA-UF-A71A-01A 8 16 In-Frame Intra-chr q14.1 Other:TTK q14.1 Seq+ 90793 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM241-PACS1 TMEM241 chr18 23309680 - PACS1 chr11 66193486 + Exonic hg38 HNSC TCGA-UF-A71B-01A 1 5 In-Frame Inter-chr q11.2 q13.1 90794 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPC1-QPCT EPC1 chr10 32305772 - QPCT chr2 37359580 + Exonic hg38 HNSC TCGA-UF-A71E-01A 8 10 Out-of-frame Inter-chr p11.22 p22.2 Seq+ 90795 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASSF8-ARNTL2 RASSF8 chr12 26068923 + ARNTL2 chr12 27400534 + Exonic hg38 HNSC TCGA-UF-A7J9-01A 5 10 3'UTR-CDS Intra-chr p12.1 Tumor suppressor gene p11.23 Transcription factor Seq+ 90796 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERC1-HEBP1 ERC1 chr12 1408247 + HEBP1 chr12 12989415 - Exonic hg38 HNSC TCGA-UF-A7J9-01A 1 17 In-Frame Intra-chr p13.1 Seq+ 90797 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAG1-SPSB4 STAG1 chr3 136398749 - SPSB4 chr3 141147142 + Exonic hg38 HNSC TCGA-UF-A7JA-01A 4 7 Out-of-frame Intra-chr q22.3 q23 Seq+ 90798 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC11-ING2 TRAPPC11 chr4 183679486 + ING2 chr4 183510282 + Exonic hg38 HNSC TCGA-UF-A7JA-01A 3 3 Out-of-frame Intra-chr q35.1 q35.1 Tumor suppressor gene Seq+ 90799 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCD-SLC4A8 PRKCD chr3 53190001 + SLC4A8 chr12 51489700 + Exonic hg38 HNSC TCGA-UF-A7JA-01A 2 5 In-Frame Inter-chr p21.1 Tumor suppressor gene q13.13 Seq+ 90800 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNHG6-PPP1R42 SNHG6 chr8 66925437 - PPP1R42 chr8 67010831 - Exonic hg38 HNSC TCGA-UF-A7JD-01A 13 39 3'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 90801 ChimerSeq TCGA FAWG TCGA_RNA-Seq POGZ-SLC6A13 POGZ chr1 151423397 - SLC6A13 chr12 243813 - Exonic hg38 HNSC TCGA-UF-A7JD-01A 4 13 In-Frame Inter-chr q21.3 p13.33 Seq+ 90802 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLFN5-CDK5RAP3 SLFN5 chr17 35243143 + CDK5RAP3 chr17 47973519 + Exonic hg38 HNSC TCGA-UF-A7JD-01A 3 15 5'UTR-5'UTR Intra-chr q12 q21.32 Seq+ 90803 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMIM15-ELOVL7 SMIM15 chr5 61161088 - ELOVL7 chr5 60799230 - Exonic hg38 HNSC TCGA-UF-A7JD-01A 2 11 5'UTR-5'UTR Intra-chr q12.1 q12.1 Seq+ 90804 ChimerSeq TCGA FAWG TCGA_RNA-Seq LEMD3-TSPAN8 LEMD3 chr12 65171118 + TSPAN8 chr12 71282819 - Exonic hg38 HNSC TCGA-UF-A7JH-01A 1 11 CDS-5'UTR Intra-chr q14.3 q21.1 Seq+ 90805 ChimerSeq TCGA FAWG TCGA_RNA-Seq AEBP2-PIK3C2G AEBP2 chr12 19473355 + PIK3C2G chr12 18609535 + Exonic hg38 HNSC TCGA-UF-A7JJ-01A 6 2 Out-of-frame Intra-chr p12.3 Transcription factor p12.3 Seq+ 90806 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARP4-COL9A1 PARP4 chr13 24512706 - COL9A1 chr6 70283820 - Exonic hg38 HNSC TCGA-UF-A7JJ-01A 1 15 5'UTR-CDS Inter-chr q12.12 q13 Seq+ 90807 ChimerSeq TCGA FAWG TCGA_RNA-Seq POMK-ANK1 POMK chr8 43103830 + ANK1 chr8 41734069 - Exonic hg38 HNSC TCGA-UF-A7JK-01A 9 26 In-Frame Intra-chr p11.21 p11.21 Seq+ 90808 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4-ULK2 MAP4 chr3 47914817 - ULK2 chr17 19777716 - Exonic hg38 HNSC TCGA-UF-A7JK-01A 1 11 Out-of-frame Inter-chr p21.31 p11.2 Other:ULK Seq+ 90809 ChimerSeq TCGA FAWG TCGA_RNA-Seq YAP1-SHANK2 YAP1 chr11 102162571 + SHANK2 chr11 70502931 - Exonic hg38 HNSC TCGA-UF-A7JV-01A 3 4 Out-of-frame Intra-chr q22.1 Tumor suppressor gene q13.4 Seq+ 90810 ChimerSeq TCGA FAWG TCGA_RNA-Seq PACS1-FOLH1 PACS1 chr11 66193573 + FOLH1 chr11 49158043 - Exonic hg38 HNSC TCGA-UF-A7JV-01A 2 7 In-Frame Intra-chr q13.1 p11.12 Seq+ 90811 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-RRAS2 UVRAG chr11 75815524 + RRAS2 chr11 14295855 - Exonic hg38 HNSC TCGA-UF-A7JV-01A 3 1 In-Frame Intra-chr q13.5 Tumor suppressor gene p15.2 90812 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTSC-MMP12 CTSC chr11 88334937 - MMP12 chr11 102873112 - Exonic hg38 HNSC TCGA-UF-A7JV-01A 1 7 In-Frame Intra-chr q14.2 q22.2 90813 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMTOR1-UVRAG LAMTOR1 chr11 72098289 - UVRAG chr11 75851883 + Exonic hg38 HNSC TCGA-UF-A7JV-01A 1 4 In-Frame Intra-chr q13.4 q13.5 Tumor suppressor gene 90814 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYLD-UNGP1 CYLD chr16 50782466 + UNGP1 chr16 51278781 + Exonic hg38 HNSC TCGA-UP-A6WW-01A 13 17 Out-of-frame Intra-chr q12.1 Oncogene Tumor suppressor gene Seq+ 90815 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN5-MAPK10 TSPAN5 chr4 98658146 - MAPK10 chr4 86017375 - Exonic hg38 HNSC TCGA-UP-A6WW-01A 3 20 Out-of-frame Intra-chr q23 q21.3 Tumor suppressor gene Seq+ 90816 ChimerSeq TCGA FAWG TCGA_RNA-Seq C9orf3-CUEDC1 C9orf3 chr9 94956015 + CUEDC1 chr17 57885879 - Exonic hg38 HNSC TCGA-UP-A6WW-01A 1 5 Out-of-frame Inter-chr q22.32 q22 Seq+ 90817 ChimerSeq TCGA FAWG TCGA_RNA-Seq C20orf194-ADRA1D C20orf194 chr20 3407475 - ADRA1D chr20 4222130 - Exonic hg38 KICH TCGA-KL-8328-01A 2 8 Out-of-frame Intra-chr p13 p13 Seq+ 90818 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEDD4L-APCDD1 NEDD4L chr18 58252054 + APCDD1 chr18 10468469 + Exonic hg38 KICH TCGA-KL-8329-01A 1 3 Out-of-frame Intra-chr q21.31 Tumor suppressor gene p11.22 90819 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSD17B12-WT1 HSD17B12 chr11 43680987 + WT1 chr11 32428619 - Exonic hg38 KICH TCGA-KL-8335-01A 6 5 In-Frame Intra-chr p11.2 p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 90820 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD8-CBLN3 CHD8 chr14 21392551 - CBLN3 chr14 24430922 - Exonic hg38 KICH TCGA-KL-8339-01A 38 154 Out-of-frame Intra-chr q11.2 q12 90821 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOX6-BTBD10 SOX6 chr11 16318446 - BTBD10 chr11 13405856 - Exonic hg38 KICH TCGA-KL-8339-01A 7 48 In-Frame Intra-chr p15.2 Transcription factor p15.3 Seq+ 90822 ChimerSeq TCGA FAWG TCGA_RNA-Seq MMP14-RBM23 MMP14 chr14 22836925 + RBM23 chr14 22902382 - Exonic hg38 KICH TCGA-KL-8339-01A 7 30 In-Frame Intra-chr q11.2 q11.2 Seq+ 90823 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM47-NRL RBM47 chr4 40515867 - NRL chr14 24084745 - Exonic hg38 KICH TCGA-KL-8339-01A 2 33 5'UTR-5'UTR Inter-chr p14 q12 Transcription factor Seq+ 90824 ChimerSeq TCGA FAWG TCGA_RNA-Seq HECTD1-DHRS4L2 HECTD1 chr14 31144807 - DHRS4L2 chr14 23990182 + Exonic hg38 KICH TCGA-KL-8339-01A 5 16 CDS-3'UTR Intra-chr q12 q11.2 Seq+ 90825 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD10-ZC3H12C STARD10 chr11 72780975 - ZC3H12C chr11 110136663 + Exonic hg38 KICH TCGA-KL-8339-01A 6 5 In-Frame Intra-chr q13.4 q22.3 Seq+ 90826 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAS2-SOX6 GAS2 chr11 22675014 + SOX6 chr11 16341252 - Exonic hg38 KICH TCGA-KL-8339-01A 1 7 5'UTR-5'UTR Intra-chr p14.3 p15.2 Transcription factor Seq+ 90827 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAALC-EIF3E BAALC chr8 103141057 + EIF3E chr8 108203503 - Exonic hg38 KICH TCGA-KL-8341-01A 34 43 Out-of-frame Intra-chr q22.3 q23.1 Seq+ 90828 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR72-AZIN1 WDR72 chr15 53665572 - AZIN1 chr8 102887147 - Exonic hg38 KICH TCGA-KL-8341-01A 7 29 CDS-5'UTR Inter-chr q21.3 q22.3 90829 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMC1-WDR72 CMC1 chr3 28263380 + WDR72 chr15 53523322 - Exonic hg38 KICH TCGA-KL-8341-01A 5 13 In-Frame Inter-chr p24.1 q21.3 Seq+ 90830 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP12-CCL28 LRP12 chr8 104531907 - CCL28 chr5 43388476 - Exonic hg38 KICH TCGA-KL-8341-01A 4 12 In-Frame Inter-chr q22.3 p12 Seq+ 90831 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPS7A-ZDHHC11B COPS7A chr12 6729449 + ZDHHC11B chr5 716865 - Exonic hg38 KICH TCGA-KL-8341-01A 5 5 In-Frame Inter-chr p13.31 p15.33 90832 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13C-RB1CC1 VPS13C chr15 62000564 - RB1CC1 chr8 52686967 - Exonic hg38 KICH TCGA-KL-8341-01A 1 8 CDS-5'UTR Inter-chr q22.2 q11.23 Tumor suppressor gene Seq+ 90833 ChimerSeq TCGA FAWG TCGA_RNA-Seq THSD4-ZNF710 THSD4 chr15 71256715 + ZNF710 chr15 90067110 + Exonic hg38 KICH TCGA-KL-8341-01A 1 6 CDS-5'UTR Intra-chr q23 q26.1 Transcription factor Seq+ 90834 ChimerSeq TCGA FAWG TCGA_RNA-Seq STXBP5L-EPHA3 STXBP5L chr3 121381532 + EPHA3 chr3 89395837 + Exonic hg38 KICH TCGA-KL-8341-01A 1 5 In-Frame Intra-chr q13.33 p11.1 Oncogene Tumor suppressor gene Seq+ 90835 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAD3-ATP8B4 SMAD3 chr15 67066360 + ATP8B4 chr15 50107008 - Exonic hg38 KICH TCGA-KL-8341-01A 1 3 CDS-5'UTR Intra-chr q22.33 Transcription factor q21.2 90836 ChimerSeq TCGA FAWG TCGA_RNA-Seq SORD-RAB27A SORD chr15 45023349 + RAB27A chr15 55205705 - Exonic hg38 KICH TCGA-KL-8341-01A 1 3 Out-of-frame Intra-chr q21.1 q21.3 90837 ChimerSeq TCGA FAWG TCGA_RNA-Seq LNPEP-GPBP1 LNPEP chr5 96936174 + GPBP1 chr5 57249454 + Exonic hg38 KICH TCGA-KM-8443-01A 19 44 Out-of-frame Intra-chr q15 q11.2 Transcription factor Seq+ 90838 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS36-LPAR6 VPS36 chr13 52439098 - LPAR6 chr13 48389812 - Exonic hg38 KICH TCGA-KM-8443-01A 3 15 CDS-3'UTR Intra-chr q14.3 q14.2 90839 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXO1-PDGFRB FOXO1 chr13 40665583 - PDGFRB chr5 150120123 - Exonic hg38 KICH TCGA-KM-8443-01A 2 4 In-Frame Inter-chr q14.11 Oncogene Tumor suppressor gene Transcription factor q32 Oncogene Seq+ 90840 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAF3-ZNF839 TRAF3 chr14 102777675 + ZNF839 chr14 102334554 + Exonic hg38 KICH TCGA-KN-8425-01A 1 2 5'UTR-CDS Intra-chr q32.32 q32.31 90841 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF3B-AMZ1 EIF3B chr7 2377075 + AMZ1 chr7 2700234 + Exonic hg38 KICH TCGA-KN-8427-01A 1 6 CDS-5'UTR Intra-chr p22.3 p22.3 90842 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA2-C6orf58 LAMA2 chr6 128883357 + C6orf58 chr6 127578686 + Exonic hg38 KICH TCGA-KN-8428-01A 11 57 In-Frame Intra-chr q22.33 q22.33 Seq+ 90843 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHG4B-ADCY2 PLEKHG4B chr5 113448 + ADCY2 chr5 7520738 + Exonic hg38 KICH TCGA-KN-8435-01A 6 20 In-Frame Intra-chr p15.33 p15.31 90844 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDCD6-TERT PDCD6 chr5 271821 + TERT chr5 1282624 - Exonic hg38 KICH TCGA-KN-8435-01A 1 3 Out-of-frame Intra-chr p15.33 p15.33 Oncogene Seq+ 90845 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARNT-MRPL52 ARNT chr1 150846263 - MRPL52 chr14 22834172 + Exonic hg38 KICH TCGA-KO-8404-01A 2 1 Out-of-frame Inter-chr q21.3 Oncogene Transcription factor q11.2 Seq+ 90846 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFE3-MED15 TFE3 chrX 49038010 - MED15 chr22 20582611 + Exonic hg38 KIRC TCGA-6D-AA2E-01A 9 53 In-Frame Inter-chr p11.23 Oncogene Transcription factor q11.21 Seq+ 90847 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED15-TFE3 MED15 chr22 20575232 + TFE3 chrX 49034251 - Exonic hg38 KIRC TCGA-6D-AA2E-01A 3 66 In-Frame Inter-chr q11.21 p11.23 Oncogene Transcription factor Seq+ 90848 ChimerSeq TCGA FAWG TCGA_RNA-Seq FMN2-CHCHD6 FMN2 chr1 240355908 + CHCHD6 chr3 126780340 + Exonic hg38 KIRC TCGA-A3-3306-01A 1 6 Out-of-frame Inter-chr q43 q21.3 90849 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2D2-NEBL UBE2D2 chr5 139526612 + NEBL chr10 20812940 - Exonic hg38 KIRC TCGA-A3-3307-01A 1 1 5'UTR-CDS Inter-chr q31.2 p12.31 90850 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFKBIE-SLC29A1 NFKBIE chr6 44260043 - SLC29A1 chr6 44227260 + Exonic hg38 KIRC TCGA-A3-3311-01A 13 106 In-Frame Intra-chr p21.1 p21.1 Seq+ 90851 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPO5-MRPS10 XPO5 chr6 43547608 - MRPS10 chr6 42211917 - Exonic hg38 KIRC TCGA-A3-3313-01A 180 486 In-Frame Intra-chr p21.1 Tumor suppressor gene p21.1 Seq+ 90852 ChimerSeq TCGA FAWG TCGA_RNA-Seq C6orf106-LRRC1 C6orf106 chr6 34646601 - LRRC1 chr6 53920625 + Exonic hg38 KIRC TCGA-A3-3313-01A 18 114 Out-of-frame Intra-chr p21.31 p12.1 Seq+ 90853 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTCHD4-CD2AP PTCHD4 chr6 48008634 - CD2AP chr6 47503280 + Exonic hg38 KIRC TCGA-A3-3313-01A 19 64 In-Frame Intra-chr p12.3 p12.3 Seq+ 90854 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKHD1-RCAN2 PKHD1 chr6 51830861 - RCAN2 chr6 46248896 - Exonic hg38 KIRC TCGA-A3-3313-01A 11 90 Out-of-frame Intra-chr p12.2 Oncogene p12.3 Seq+ 90855 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP39A1-LEMD2 CYP39A1 chr6 46652406 - LEMD2 chr6 33781153 - Exonic hg38 KIRC TCGA-A3-3313-01A 14 48 Out-of-frame Intra-chr p12.3 p21.31 Seq+ 90856 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIST1H2AK-SCGN HIST1H2AK chr6 27837954 - SCGN chr6 25689173 + Exonic hg38 KIRC TCGA-A3-3313-01A 3 49 Out-of-frame Intra-chr p22.1 p22.2 Seq+ 90857 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMTR1-GPX6 CMTR1 chr6 37435762 + GPX6 chr6 28510904 - Exonic hg38 KIRC TCGA-A3-3313-01A 5 11 Out-of-frame Intra-chr p21.2 90858 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTN2A1-HIST1H2BC BTN2A1 chr6 26463525 + HIST1H2BC chr6 26115135 - Exonic hg38 KIRC TCGA-A3-3313-01A 4 7 CDS-3'UTR Intra-chr p22.2 p22.2 Seq+ 90859 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS18A-KIF6 MRPS18A chr6 43681089 - KIF6 chr6 39385672 - Exonic hg38 KIRC TCGA-A3-3313-01A 2 10 Out-of-frame Intra-chr p21.1 p21.2 Seq+ 90860 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZSCAN9-MRPS18A ZSCAN9 chr6 28227837 + MRPS18A chr6 43675617 - Exonic hg38 KIRC TCGA-A3-3313-01A 1 13 Out-of-frame Intra-chr p22.1 Transcription factor p21.1 90861 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRERF1-OR2H1 TRERF1 chr6 42451177 - OR2H1 chr6 29458454 + Exonic hg38 KIRC TCGA-A3-3313-01A 1 10 5'UTR-3'UTR Intra-chr p21.1 Transcription factor Seq+ 90862 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCTD20-C6orf106 KCTD20 chr6 36443111 + C6orf106 chr6 34654779 - Exonic hg38 KIRC TCGA-A3-3313-01A 1 9 Out-of-frame Intra-chr p21.31 p21.31 90863 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHD1-DGCR6 EHD1 chr11 64853214 - DGCR6 chr22 18913012 + Exonic hg38 KIRC TCGA-A3-3319-01A 17 41 Out-of-frame Inter-chr q13.1 q11.21 90864 ChimerSeq TCGA FAWG TCGA_RNA-Seq HAVCR1-TIMD4 HAVCR1 chr5 157037247 - TIMD4 chr5 156926312 - Exonic hg38 KIRC TCGA-A3-3322-01A 1 1 In-Frame Intra-chr q33.3 q33.3 90865 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOT1L-ONECUT3 DOT1L chr19 2207680 + ONECUT3 chr19 1775153 + Exonic hg38 KIRC TCGA-A3-3325-01A 3 7 Out-of-frame Intra-chr p13.3 Oncogene Transcription factor p13.3 Transcription factor Seq+ 90866 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHSA2-KIAA1841 AHSA2 chr2 61186497 + KIAA1841 chr2 61134137 + Exonic hg38 KIRC TCGA-A3-3326-01A 5 6 Out-of-frame Intra-chr p15 p15 Seq+ 90867 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R1A-CENPP PPP2R1A chr19 52190174 + CENPP chr9 92611314 + Exonic hg38 KIRC TCGA-A3-3328-01A 8 21 In-Frame Inter-chr q13.41 Oncogene q22.31 Seq+ 90868 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC23A2-TMX4 SLC23A2 chr20 4970793 - TMX4 chr20 8001541 - Exonic hg38 KIRC TCGA-A3-3328-01A 7 19 5'UTR-CDS Intra-chr p13 p12.3 Seq+ 90869 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF416-DTD1 ZNF416 chr19 57578057 - DTD1 chr20 18744100 + Exonic hg38 KIRC TCGA-A3-3328-01A 4 23 In-Frame Inter-chr q13.43 Transcription factor p11.23 Seq+ 90870 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA5A-TMX4 SEMA5A chr5 9379823 - TMX4 chr20 8010315 - Exonic hg38 KIRC TCGA-A3-3328-01A 2 2 Out-of-frame Inter-chr p15.31 p12.3 Seq+ 90871 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSGIN2-DECR1 OSGIN2 chr8 89909721 + DECR1 chr8 90017124 + Exonic hg38 KIRC TCGA-A3-3335-01A 11 44 Out-of-frame Intra-chr q21.3 q21.3 90872 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPEPPS-YWHAEP7 NPEPPS chr17 47531555 + YWHAEP7 chr17 37884015 - Exonic hg38 KIRC TCGA-A3-3362-01A 9 11 CDS-5'UTR Intra-chr q21.32 q12 90873 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR60-VIPR2 WDR60 chr7 158901816 + VIPR2 chr7 159058578 - Exonic hg38 KIRC TCGA-A3-3363-01A 11 25 In-Frame Intra-chr q36.3 q36.3 Seq+ 90874 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP3-MKLN1 AGAP3 chr7 151087072 + MKLN1 chr7 131387120 + Exonic hg38 KIRC TCGA-A3-3363-01A 4 3 Out-of-frame Intra-chr q36.1 q32.3 Seq+ 90875 ChimerSeq TCGA FAWG TCGA_RNA-Seq HES4-AFF1 HES4 chr1 999692 - AFF1 chr4 87084120 + Exonic hg38 KIRC TCGA-A3-3373-01A 4 46 Out-of-frame Inter-chr p36.33 Transcription factor q21.3 Oncogene Seq+ 90876 ChimerSeq TCGA FAWG TCGA_RNA-Seq EDNRB-COL4A1 EDNRB chr13 77918091 - COL4A1 chr13 110242734 - Exonic hg38 KIRC TCGA-A3-A8OW-01A 1 1 In-Frame Intra-chr q22.3 Tumor suppressor gene q34 90877 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO15B-SAP30BP MYO15B chr17 75596899 + SAP30BP chr17 75668516 + Exonic hg38 KIRC TCGA-AK-3426-01A 1000 1000 Out-of-frame Intra-chr q25.1 q25.1 90878 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS9-PTPRG ADAMTS9 chr3 64685338 + PTPRG chr3 62003349 + Exonic hg38 KIRC TCGA-AK-3428-01A 4 14 Out-of-frame Intra-chr p14.1 Tumor suppressor gene p14.2 90879 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTCL1-LRRC41 MTCL1 chr18 8826232 + LRRC41 chr1 46298370 - Exonic hg38 KIRC TCGA-AK-3445-01A 3 22 Out-of-frame Inter-chr p11.22 p33 90880 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBRM1-NT5DC2 PBRM1 chr3 52668498 - NT5DC2 chr3 52525295 - Exonic hg38 KIRC TCGA-AK-3455-01A 1 6 In-Frame Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 90881 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFE3-SFPQ TFE3 chrX 49043111 - SFPQ chr1 35188090 - Exonic hg38 KIRC TCGA-AK-3456-01A 68 197 In-Frame Inter-chr p11.23 Oncogene Transcription factor p34.3 KB Seq+ 90882 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFPQ-TFE3 SFPQ chr1 35189003 - TFE3 chrX 49040568 - Exonic hg38 KIRC TCGA-AK-3456-01A 75 160 In-Frame Inter-chr p34.3 p11.23 Oncogene Transcription factor KB Pub Seq+ 90883 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP19-CYB5A ARHGAP19 chr10 97292572 - CYB5A chr18 74263477 - Exonic hg38 KIRC TCGA-AS-3777-01A 35 49 Out-of-frame Inter-chr q24.1 q22.3 Tumor suppressor gene Seq+ 90884 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPT1A-ANPEP CPT1A chr11 68841775 - ANPEP chr15 89785501 - Exonic hg38 KIRC TCGA-AS-3777-01A 20 16 5'UTR-CDS Inter-chr q13.3 q26.1 Seq+ 90885 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKL1-SPIDR MKL1 chr22 40636478 - SPIDR chr8 47673801 + Exonic hg38 KIRC TCGA-AS-3777-01A 17 12 Out-of-frame Inter-chr q13.2 q11.21 90886 ChimerSeq TCGA FAWG TCGA_RNA-Seq COQ10A-NABP2 COQ10A chr12 56269561 + NABP2 chr12 56223584 + Exonic hg38 KIRC TCGA-AS-3777-01A 11 16 CDS-5'UTR Intra-chr q13.3 q13.3 90887 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPM-GOLT1B CPM chr12 68932678 - GOLT1B chr12 21506885 + Exonic hg38 KIRC TCGA-AS-3777-01A 7 23 In-Frame Intra-chr q15 p12.1 Seq+ 90888 ChimerSeq TCGA FAWG TCGA_RNA-Seq CALD1-CGN CALD1 chr7 134891673 + CGN chr1 151518506 + Exonic hg38 KIRC TCGA-AS-3777-01A 4 12 CDS-5'UTR Inter-chr q33 q21.3 Seq+ 90889 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLCO2B1-HNF4A SLCO2B1 chr11 75159872 + HNF4A chr20 44406058 + Exonic hg38 KIRC TCGA-AS-3777-01A 3 13 5'UTR-CDS Inter-chr q13.4 q13.12 Tumor suppressor gene Transcription factor Seq+ 90890 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP8B1-SLC50A1 ATP8B1 chr18 57695171 - SLC50A1 chr1 155136299 + Exonic hg38 KIRC TCGA-AS-3777-01A 4 3 Out-of-frame Inter-chr q21.31 q22 Seq+ 90891 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABHD6-FLNB ABHD6 chr3 58256705 + FLNB chr3 58118872 + Exonic hg38 KIRC TCGA-AS-3777-01A 1 8 Out-of-frame Intra-chr p14.3 p14.3 Seq+ 90892 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAS2L1-EWSR1 GAS2L1 chr22 29310998 + EWSR1 chr22 29298733 + Exonic hg38 KIRC TCGA-AS-3777-01A 1 3 Out-of-frame Intra-chr q12.2 q12.2 90893 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A30-CCDC107 SLC25A30 chr13 45408927 - CCDC107 chr9 35658576 + Exonic hg38 KIRC TCGA-AS-3777-01A 1 3 Out-of-frame Inter-chr q14.13 p13.3 Seq+ 90894 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO18-ITGA8 FBXO18 chr10 5918478 + ITGA8 chr10 15606422 - Exonic hg38 KIRC TCGA-B0-4688-01A 51 134 Out-of-frame Intra-chr p15.1 p13 Seq+ 90895 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNY-PTPRD CCNY chr10 35530243 + PTPRD chr9 10033790 - Exonic hg38 KIRC TCGA-B0-4688-01A 3 41 CDS-5'UTR Inter-chr p11.21 Oncogene Tumor suppressor gene Seq+ 90896 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1551-SOX5 KIAA1551 chr12 31970356 + SOX5 chr12 23755724 - Exonic hg38 KIRC TCGA-B0-4688-01A 4 6 Out-of-frame Intra-chr p11.21 p12.1 Transcription factor Seq+ 90897 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK32C-ADGRA1 STK32C chr10 132209034 - ADGRA1 chr10 133127233 + Exonic hg38 KIRC TCGA-B0-4688-01A 2 3 In-Frame Intra-chr q26.3 q26.3 90898 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D10A-RNF215 TBC1D10A chr22 30326673 - RNF215 chr22 30376020 - Exonic hg38 KIRC TCGA-B0-4688-01A 1 6 CDS-3'UTR Intra-chr q12.2 q12.2 90899 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-SOX6 UVRAG chr11 75912039 + SOX6 chr11 16612260 - Exonic hg38 KIRC TCGA-B0-4688-01A 2 1 CDS-5'UTR Intra-chr q13.5 Tumor suppressor gene p15.2 Transcription factor 90900 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARNT2-MS4A3 ARNT2 chr15 80581404 + MS4A3 chr11 60066951 + Exonic hg38 KIRC TCGA-B0-4688-01A 1 3 CDS-3'UTR Inter-chr q25.1 Transcription factor q12.1 Seq+ 90901 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASPH-SIPA1L1 ASPH chr8 61680968 - SIPA1L1 chr14 71587571 + Exonic hg38 KIRC TCGA-B0-4688-01A 1 1 CDS-5'UTR Inter-chr q12.3 q24.2 90902 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP205-WDR91 NUP205 chr7 135604460 + WDR91 chr7 135198151 - Exonic hg38 KIRC TCGA-B0-4690-01A 5 17 In-Frame Intra-chr q33 q33 Seq+ 90903 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHDC1-MORN1 AHDC1 chr1 27547261 - MORN1 chr1 2336850 - Exonic hg38 KIRC TCGA-B0-4690-01A 2 12 3'UTR-CDS Intra-chr p35.3 Transcription factor p36.32 Seq+ 90904 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZP3-ST7 ZP3 chr7 76429633 + ST7 chr7 117209787 + Exonic hg38 KIRC TCGA-B0-4690-01A 1 9 Out-of-frame Intra-chr q11.23 q31.2 Tumor suppressor gene 90905 ChimerSeq TCGA FAWG TCGA_RNA-Seq IQGAP1-WDR93 IQGAP1 chr15 90449643 + WDR93 chr15 89701707 + Exonic hg38 KIRC TCGA-B0-4690-01A 1 3 CDS-5'UTR Intra-chr q26.1 q26.1 90906 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF710-PLIN1 ZNF710 chr15 90001614 + PLIN1 chr15 89673414 - Exonic hg38 KIRC TCGA-B0-4690-01A 1 3 5'UTR-CDS Intra-chr q26.1 Transcription factor q26.1 90907 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPG2-CEP41 COPG2 chr7 130652869 - CEP41 chr7 130402799 - Exonic hg38 KIRC TCGA-B0-4691-01A 9 44 In-Frame Intra-chr q32.2 q32.2 Seq+ 90908 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLGA3-ZNF891 GOLGA3 chr12 132816540 - ZNF891 chr12 133122024 - Exonic hg38 KIRC TCGA-B0-4696-01A 13 108 CDS-5'UTR Intra-chr q24.33 q24.33 Transcription factor 90909 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNTLN-RFX3 CNTLN chr9 17226287 + RFX3 chr9 3248185 - Exonic hg38 KIRC TCGA-B0-4696-01A 5 27 Out-of-frame Intra-chr p22.2 p24.2 Transcription factor Seq+ 90910 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D5-HTT TBC1D5 chr3 17742481 - HTT chr4 3223406 + Exonic hg38 KIRC TCGA-B0-4696-01A 3 13 5'UTR-CDS Inter-chr p24.3 p16.3 Seq+ 90911 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4C-RFX3 KDM4C chr9 6805774 + RFX3 chr9 3225280 - Exonic hg38 KIRC TCGA-B0-4696-01A 2 5 Out-of-frame Intra-chr p24.1 p24.2 Transcription factor Seq+ 90912 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASC4-CTDSPL2 CASC4 chr15 44338317 + CTDSPL2 chr15 44496380 + Exonic hg38 KIRC TCGA-B0-4698-01A 5 1 In-Frame Intra-chr q15.3 q15.3 90913 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRU-NOS1AP PTPRU chr1 29292026 + NOS1AP chr1 162154405 + Exonic hg38 KIRC TCGA-B0-4698-01A 3 3 Out-of-frame Intra-chr p35.3 q23.3 Seq+ 90914 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGA2-CHMP1A HMGA2 chr12 65828087 + CHMP1A chr16 89647331 - Exonic hg38 KIRC TCGA-B0-4698-01A 1 2 In-Frame Inter-chr q14.3 Transcription factor q24.3 90915 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOR2-FMR1NB NCOR2 chr12 124398119 - FMR1NB chrX 148003201 + Exonic hg38 KIRC TCGA-B0-4699-01A 3 5 In-Frame Inter-chr q24.31 q27.3 Seq+ 90916 ChimerSeq TCGA FAWG TCGA_RNA-Seq VHL-TATDN2 VHL chr3 10142187 + TATDN2 chr3 10270131 + Exonic hg38 KIRC TCGA-B0-4700-01A 1 1 Out-of-frame Intra-chr p25.3 Oncogene Tumor suppressor gene p25.3 90917 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1orf106-KIF21B C1orf106 chr1 200901100 + KIF21B chr1 201001610 - Exonic hg38 KIRC TCGA-B0-4701-01A 1000 1000 Out-of-frame Intra-chr q32.1 q32.1 90918 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBD5-ACOD1 MBD5 chr2 148342336 + ACOD1 chr13 76952489 + Exonic hg38 KIRC TCGA-B0-4706-01A 2 10 5'UTR-CDS Inter-chr q23.1 q22.3 90919 ChimerSeq TCGA FAWG TCGA_RNA-Seq A2M-TMEM52B A2M chr12 9074560 - TMEM52B chr12 10175282 + Exonic hg38 KIRC TCGA-B0-4714-01A 7 8 CDS-5'UTR Intra-chr p13.31 p13.2 90920 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIMMDC1-RFESD TIMMDC1 chr3 119504021 + RFESD chr5 95656952 + Exonic hg38 KIRC TCGA-B0-4810-01A 4 36 CDS-3'UTR Inter-chr q13.33 q15 Seq+ 90921 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPK-PFKP HNRNPK chr9 83980153 - PFKP chr10 3129819 + Exonic hg38 KIRC TCGA-B0-4810-01A 2 1 5'UTR-CDS Inter-chr q21.32 p15.2 Seq+ 90922 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L1-PHF20 EPB41L1 chr20 36125527 + PHF20 chr20 35842573 + Exonic hg38 KIRC TCGA-B0-4811-01A 1 2 Out-of-frame Intra-chr q11.23 q11.22 Transcription factor Seq+ 90923 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2E2-ROBO2 GTF2E2 chr8 30657973 - ROBO2 chr3 77098014 + Exonic hg38 KIRC TCGA-B0-4816-01A 2 1 5'UTR-5'UTR Inter-chr p12 p12.3 90924 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA6-PDK1 ITGA6 chr2 172504251 + PDK1 chr2 172556000 + Exonic hg38 KIRC TCGA-B0-4816-01A 1000 1000 Out-of-frame Intra-chr q31.1 q31.1 AGC:PDK1 90925 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNPEP-TIMM17A RNPEP chr1 202003461 + TIMM17A chr1 201963616 + Exonic hg38 KIRC TCGA-B0-4819-01A 1 2 In-Frame Intra-chr q32.1 q32.1 90926 ChimerSeq TCGA FAWG TCGA_RNA-Seq HAUS6-PLIN2 HAUS6 chr9 19070219 - PLIN2 chr9 19131271 - Exonic hg38 KIRC TCGA-B0-4821-01A 4 6 CDS-5'UTR Intra-chr p22.1 p22.1 Seq+ 90927 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4-DHX30 MAP4 chr3 48088773 - DHX30 chr3 47805326 + Exonic hg38 KIRC TCGA-B0-4822-01A 1 1 5'UTR-5'UTR Intra-chr p21.31 p21.31 Seq+ 90928 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM63B-MRPL14 TMEM63B chr6 44154445 + MRPL14 chr6 44116629 - Exonic hg38 KIRC TCGA-B0-4836-01A 4 26 In-Frame Intra-chr p21.1 p21.1 Seq+ 90929 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLPTM1L-SLC6A18 CLPTM1L chr5 1334289 - SLC6A18 chr5 1232219 + Exonic hg38 KIRC TCGA-B0-4842-01A 1 7 3'UTR-CDS Intra-chr p15.33 p15.33 90930 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNPDA2-TIAM2 GNPDA2 chr4 44717113 - TIAM2 chr6 154907730 + Exonic hg38 KIRC TCGA-B0-4842-01A 2 1 CDS-5'UTR Inter-chr p12 q25.2 90931 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYM-SLC14A2 DYM chr18 49378567 - SLC14A2 chr18 45666137 + Exonic hg38 KIRC TCGA-B0-4844-01A 1 11 In-Frame Intra-chr q21.1 q12.3 Seq+ 90932 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCTP1-CBLB MCTP1 chr5 94868333 - CBLB chr3 105776542 - Exonic hg38 KIRC TCGA-B0-4849-01A 5 6 Out-of-frame Inter-chr q15 q13.11 Seq+ 90933 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELL-CISD3 ELL chr19 18465412 - CISD3 chr17 38730760 + Exonic hg38 KIRC TCGA-B0-4945-01A 17 134 CDS-3'UTR Inter-chr p13.11 Seq+ 90934 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTIF-GRM4 CTIF chr18 48670744 + GRM4 chr6 34092099 - Exonic hg38 KIRC TCGA-B0-4945-01A 2 11 3'UTR-CDS Inter-chr p21.31 Seq+ 90935 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAH11-VDAC3 DNAH11 chr7 21545149 + VDAC3 chr8 42393845 + Exonic hg38 KIRC TCGA-B0-4945-01A 1 15 CDS-5'UTR Inter-chr p15.3 p11.21 90936 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC35D1-PRKAR2B SLC35D1 chr1 67049782 - PRKAR2B chr7 107121952 + Exonic hg38 KIRC TCGA-B0-4945-01A 1 5 CDS-3'UTR Inter-chr p31.3 Seq+ 90937 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC9A3R1-RAB37 SLC9A3R1 chr17 74766976 + RAB37 chr17 74729256 + Exonic hg38 KIRC TCGA-B0-5075-01A 2 5 In-Frame Intra-chr q25.1 Tumor suppressor gene q25.1 Seq+ 90938 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF277-CEACAM19 ZNF277 chr7 112206807 + CEACAM19 chr19 44672596 + Exonic hg38 KIRC TCGA-B0-5081-01A 11 47 In-Frame Inter-chr q31.1 Transcription factor q13.31 Seq+ 90939 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELOF1-RDH8 ELOF1 chr19 11559191 - RDH8 chr19 10017057 + Exonic hg38 KIRC TCGA-B0-5084-01A 101 21 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 90940 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLLT6-AATF MLLT6 chr17 38705741 + AATF chr17 36988519 + Exonic hg38 KIRC TCGA-B0-5088-01A 2 18 3'UTR-3'UTR Intra-chr q12 Seq+ 90941 ChimerSeq TCGA FAWG TCGA_RNA-Seq GORASP2-WIPF1 GORASP2 chr2 170929403 + WIPF1 chr2 174585611 - Exonic hg38 KIRC TCGA-B0-5095-01A 2 38 CDS-5'UTR Intra-chr q31.1 q31.1 Seq+ 90942 ChimerSeq TCGA FAWG TCGA_RNA-Seq NECTIN2-GAMT NECTIN2 chr19 44874478 + GAMT chr19 1397499 - Exonic hg38 KIRC TCGA-B0-5100-01A 2 1 Out-of-frame Intra-chr q13.32 p13.3 90943 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP35-NPAS1 ARHGAP35 chr19 46922356 + NPAS1 chr19 47032278 + Exonic hg38 KIRC TCGA-B0-5107-01A 1 1 Out-of-frame Intra-chr q13.32 Transcription factor q13.32 Transcription factor 90944 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD72-DDX58 CD72 chr9 35646403 - DDX58 chr9 32459514 - Exonic hg38 KIRC TCGA-B0-5116-01A 1 3 5'UTR-CDS Intra-chr p13.3 p21.1 Tumor suppressor gene 90945 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRYL1-SPACA7 CRYL1 chr13 20489370 - SPACA7 chr13 112434485 + Exonic hg38 KIRC TCGA-B0-5117-01A 3 9 CDS-3'UTR Intra-chr q12.11 Seq+ 90946 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOL9-TRNAU1AP NOL9 chr1 6541830 - TRNAU1AP chr1 28577500 + Exonic hg38 KIRC TCGA-B0-5119-01A 18 56 In-Frame Intra-chr p36.31 p35.3 Seq+ 90947 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC6B-EP300 TNRC6B chr22 40156182 + EP300 chr22 41176247 + Exonic hg38 KIRC TCGA-B0-5692-01A 3 18 Out-of-frame Intra-chr q13.1 q13.2 Oncogene Seq+ 90948 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO7-PDPK1 FBXO7 chr22 32487828 + PDPK1 chr16 2595793 + Exonic hg38 KIRC TCGA-B0-5692-01A 1 3 Out-of-frame Inter-chr q12.3 p13.3 90949 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEC-KANSL1 PLEC chr8 143973403 - KANSL1 chr17 46067667 - Exonic hg38 KIRC TCGA-B0-5698-01A 3 6 CDS-5'UTR Inter-chr q24.3 Seq+ 90950 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-FADD PPFIA1 chr11 70272436 + FADD chr11 70206133 + Exonic hg38 KIRC TCGA-B0-5701-01A 2 4 Out-of-frame Intra-chr q13.3 q13.3 Tumor suppressor gene Seq+ 90951 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP2-FASTKD1 LRP2 chr2 169307281 - FASTKD1 chr2 169531490 - Exonic hg38 KIRC TCGA-B0-5701-01A 1 2 In-Frame Intra-chr q31.1 q31.1 Seq+ 90952 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFPQ-TFE3 SFPQ chr1 35187001 - TFE3 chrX 49034251 - Exonic hg38 KIRC TCGA-B0-5705-01A 1 5 In-Frame Inter-chr p34.3 p11.23 Oncogene Transcription factor KB Pub Seq+ 90953 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM2A-PACS1 KDM2A chr11 67121358 + PACS1 chr11 66242912 + Exonic hg38 KIRC TCGA-B0-5713-01A 1 13 Out-of-frame Intra-chr q13.2 Transcription factor q13.1 Seq+ 90954 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRIG1-SLC26A7 LRIG1 chr3 66394040 - SLC26A7 chr8 91249539 + Exonic hg38 KIRC TCGA-B0-5713-01A 2 9 5'UTR-5'UTR Inter-chr Tumor suppressor gene q21.3 Seq+ 90955 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFDN-TTLL2 AFDN chr6 167827237 + TTLL2 chr6 167338647 + Exonic hg38 KIRC TCGA-B2-3924-01A 4 38 Out-of-frame Intra-chr q27 q27 90956 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL34-ARG2 IL34 chr16 70580049 + ARG2 chr14 67620894 + Exonic hg38 KIRC TCGA-B2-4098-01A 2 8 5'UTR-5'UTR Inter-chr q22.1 q24.1 Seq+ 90957 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM172A-FHIT FAM172A chr5 93958777 - FHIT chr3 59752321 - Exonic hg38 KIRC TCGA-B2-4101-01A 21 47 In-Frame Inter-chr q15 Tumor suppressor gene p14.2 Tumor suppressor gene Seq+ 90958 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR100HG-GRAMD1B MIR100HG chr11 122367496 - GRAMD1B chr11 123577367 + Exonic hg38 KIRC TCGA-B2-5641-01A 6 14 3'UTR-CDS Intra-chr q24.1 q24.1 90959 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNFAIP8L1-SPEF2 TNFAIP8L1 chr19 4639629 + SPEF2 chr5 35691037 + Exonic hg38 KIRC TCGA-B4-5377-01A 2 6 5'UTR-CDS Inter-chr p13.3 p13.2 Seq+ 90960 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPARC-ATOX1 SPARC chr5 151686865 - ATOX1 chr5 151746449 - Exonic hg38 KIRC TCGA-B4-5838-01A 11 14 5'UTR-CDS Intra-chr q33.1 Tumor suppressor gene q33.1 Seq+ 90961 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A26-FAM19A1 SLC25A26 chr3 66346408 + FAM19A1 chr3 68538756 + Exonic hg38 KIRC TCGA-B8-4143-01A 1 8 Out-of-frame Intra-chr p14.1 Seq+ 90962 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD1-ARMC9 PSMD1 chr2 231087181 + ARMC9 chr2 231235224 + Exonic hg38 KIRC TCGA-B8-4143-01A 2 2 Out-of-frame Intra-chr q37.1 q37.1 Seq+ 90963 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC36A1-TTC37 SLC36A1 chr5 151479489 + TTC37 chr5 95467989 - Exonic hg38 KIRC TCGA-B8-4143-01A 1 6 Out-of-frame Intra-chr q33.1 q15 Seq+ 90964 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRG3-SCD NRG3 chr10 82358868 + SCD chr10 100354427 + Exonic hg38 KIRC TCGA-B8-5158-01A 3 6 Out-of-frame Intra-chr q23.1 q24.31 Seq+ 90965 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3CB-KCNAB1 PIK3CB chr3 138694786 - KCNAB1 chr3 156457453 + Exonic hg38 KIRC TCGA-B8-5163-01A 2 32 Out-of-frame Intra-chr q22.3 Oncogene q25.31 Seq+ 90966 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTF1-SERINC2 MTF1 chr1 37857251 - SERINC2 chr1 31432967 + Exonic hg38 KIRC TCGA-B8-5164-01A 8 20 Out-of-frame Intra-chr p34.3 Transcription factor p35.2 Seq+ 90967 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFPQ-TFE3 SFPQ chr1 35187001 - TFE3 chrX 49034251 - Exonic hg38 KIRC TCGA-B8-5546-01A 69 302 In-Frame Inter-chr p34.3 p11.23 Oncogene Transcription factor KB Pub Seq+ 90968 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCM1-NRG1 PCM1 chr8 17924780 + NRG1 chr8 32754372 + Exonic hg38 KIRC TCGA-B8-5553-01A 4 15 5'UTR-5'UTR Intra-chr p22 p12 Seq+ 90969 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLCO4C1-ARHGEF38 SLCO4C1 chr5 102240718 - ARHGEF38 chr4 105700188 + Exonic hg38 KIRC TCGA-B8-A54H-01A 2 20 CDS-3'UTR Inter-chr q21.1 q24 90970 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAF3-MARK3 TRAF3 chr14 102830472 + MARK3 chr14 103428387 + Exonic hg38 KIRC TCGA-B8-A54J-01A 1 5 5'UTR-CDS Intra-chr q32.32 q32.32 CAMK:CAMKL 90971 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDZRN3-ADAM19 PDZRN3 chr3 73602354 - ADAM19 chr5 157570980 - Exonic hg38 KIRC TCGA-B8-A7U6-01A 2 5 Out-of-frame Inter-chr p13 q33.3 Seq+ 90972 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCCA-DIAPH3 PCCA chr13 100209463 + DIAPH3 chr13 60042820 - Exonic hg38 KIRC TCGA-BP-4173-01A 3 5 In-Frame Intra-chr q32.3 q21.2 Seq+ 90973 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG2A-EFCAB6 ATG2A chr11 64913038 - EFCAB6 chr22 43540357 - Exonic hg38 KIRC TCGA-BP-4173-01A 2 8 In-Frame Inter-chr q13.1 q13.31 Seq+ 90974 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD1-ARMC9 PSMD1 chr2 231138850 + ARMC9 chr2 231331793 + Exonic hg38 KIRC TCGA-BP-4331-01A 1 7 In-Frame Intra-chr q37.1 q37.1 Seq+ 90975 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP160-GALNT18 NUP160 chr11 47847848 - GALNT18 chr11 11448936 - Exonic hg38 KIRC TCGA-BP-4343-01A 1 1 5'UTR-CDS Intra-chr p11.2 p15.4 90976 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB20-CD200R1 ZBTB20 chr3 114801101 - CD200R1 chr3 112947924 - Exonic hg38 KIRC TCGA-BP-4346-01A 6 30 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.2 Seq+ 90977 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP7-ZBTB20 MAP7 chr6 136466761 - ZBTB20 chr3 114900342 - Exonic hg38 KIRC TCGA-BP-4346-01A 4 11 CDS-5'UTR Inter-chr q23.3 q13.31 Transcription factor Seq+ 90978 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMS-PHEX SMS chrX 21940873 + PHEX chrX 22133523 + Exonic hg38 KIRC TCGA-BP-4352-01A 3 5 Out-of-frame Intra-chr p22.11 p22.11 90979 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTMR3-HORMAD2 MTMR3 chr22 29883359 + HORMAD2 chr22 30093916 + Exonic hg38 KIRC TCGA-BP-4352-01A 2 0 5'UTR-5'UTR Intra-chr q12.2 q12.2 Seq+ 90980 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT9-CYP27A1 CNOT9 chr2 218568978 + CYP27A1 chr2 218809577 + Exonic hg38 KIRC TCGA-BP-4354-01A 17 64 In-Frame Intra-chr q35 q35 90981 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R2A-DPYSL2 PPP2R2A chr8 26293740 + DPYSL2 chr8 26581969 + Exonic hg38 KIRC TCGA-BP-4354-01A 1 6 Out-of-frame Intra-chr p21.2 p21.2 Seq+ 90982 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFPQ-TFE3 SFPQ chr1 35189003 - TFE3 chrX 49040568 - Exonic hg38 KIRC TCGA-BP-4756-01A 203 460 In-Frame Inter-chr p34.3 p11.23 Oncogene Transcription factor KB Pub Seq+ 90983 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB20-CD200R1 ZBTB20 chr3 114801101 - CD200R1 chr3 112947924 - Exonic hg38 KIRC TCGA-BP-4756-01A 1 3 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.2 Seq+ 90984 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFPQ-TFE3 SFPQ chr1 35189003 - TFE3 chrX 49040568 - Exonic hg38 KIRC TCGA-BP-4758-01A 5 8 In-Frame Inter-chr p34.3 p11.23 Oncogene Transcription factor KB Pub Seq+ 90985 ChimerSeq TCGA FAWG TCGA_RNA-Seq TGFB1-CCDC97 TGFB1 chr19 41341883 - CCDC97 chr19 41322595 + Exonic hg38 KIRC TCGA-BP-4761-01A 22 113 In-Frame Intra-chr q13.2 Tumor suppressor gene q13.2 Seq+ 90986 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX33-NLRP1 DHX33 chr17 5460939 - NLRP1 chr17 5501872 - Exonic hg38 KIRC TCGA-BP-4761-01A 5 9 Out-of-frame Intra-chr p13.2 p13.2 Oncogene Seq+ 90987 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBX5-NFE2 CBX5 chr12 54246115 - NFE2 chr12 54295304 - Exonic hg38 KIRC TCGA-BP-4761-01A 1 14 CDS-5'UTR Intra-chr q13.13 Tumor suppressor gene q13.13 Transcription factor Seq+ 90988 ChimerSeq TCGA FAWG TCGA_RNA-Seq TET2-OSTC TET2 chr4 105190505 + OSTC chr4 108667247 + Exonic hg38 KIRC TCGA-BP-4770-01A 1 4 5'UTR-CDS Intra-chr q24 Oncogene Tumor suppressor gene Transcription factor q25 90989 ChimerSeq TCGA FAWG TCGA_RNA-Seq INPP5A-CSTA INPP5A chr10 132749845 + CSTA chr3 122337547 + Exonic hg38 KIRC TCGA-BP-4774-01A 1 6 In-Frame Inter-chr q26.3 q21.1 Seq+ 90990 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYLK-NXPH1 MYLK chr3 123648971 - NXPH1 chr7 8751008 + Exonic hg38 KIRC TCGA-BP-4781-01A 4 10 Out-of-frame Inter-chr q21.1 p21.3 Seq+ 90991 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASB1-CLVS1 ASB1 chr2 238444727 + CLVS1 chr8 61292318 + Exonic hg38 KIRC TCGA-BP-4782-01A 2 8 CDS-5'UTR Inter-chr q37.3 q12.2 Seq+ 90992 ChimerSeq TCGA FAWG TCGA_RNA-Seq IKBKE-ACSM1 IKBKE chr1 206493991 + ACSM1 chr16 20640584 - Exonic hg38 KIRC TCGA-BP-4787-01A 1 10 In-Frame Inter-chr q32.1 Oncogene p12.3 Seq+ 90993 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K7-PDGFRB MAP3K7 chr6 90556535 - PDGFRB chr5 150114461 - Exonic hg38 KIRC TCGA-BP-4790-01A 3 1 Out-of-frame Inter-chr q15 STE:STE11 Oncogene q32 Oncogene Seq+ 90994 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNFT1-VMP1 RNFT1 chr17 59962540 - VMP1 chr17 59839768 + Exonic hg38 KIRC TCGA-BP-4790-01A 2 1 In-Frame Intra-chr q23.1 q23.1 Seq+ 90995 ChimerSeq TCGA FAWG TCGA_RNA-Seq NLK-KALRN NLK chr17 28185265 + KALRN chr3 124562843 + Exonic hg38 KIRC TCGA-BP-4798-01A 5 8 In-Frame Inter-chr q11.2 CMGC:MAPK q21.1 Seq+ 90996 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACSM2A-ABCC6 ACSM2A chr16 20480921 + ABCC6 chr16 16169853 - Exonic hg38 KIRC TCGA-BP-4801-01A 3 32 CDS-5'UTR Intra-chr p12.3 90997 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTTN-CD226 RTTN chr18 70047971 - CD226 chr18 69947433 - Exonic hg38 KIRC TCGA-BP-4801-01A 1 5 CDS-5'UTR Intra-chr q22.2 q22.2 90998 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP1B-C3orf67 MAP1B chr5 72115799 + C3orf67 chr3 58753863 - Exonic hg38 KIRC TCGA-BP-4961-01A 2 11 Out-of-frame Inter-chr q13.2 p14.2 Seq+ 90999 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLF6-ARMC4 KLF6 chr10 3780106 - ARMC4 chr10 27907777 - Exonic hg38 KIRC TCGA-BP-4962-01A 2 7 In-Frame Intra-chr p15.2 Oncogene Tumor suppressor gene Transcription factor p12.1 Seq+ 91000 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNIP1-TCOF1 TNIP1 chr5 151060318 - TCOF1 chr5 150383062 + Exonic hg38 KIRC TCGA-BP-4965-01A 9 36 Out-of-frame Intra-chr q33.1 q32 91001 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNIP1-ARSI TNIP1 chr5 151060318 - ARSI chr5 150298612 - Exonic hg38 KIRC TCGA-BP-4965-01A 7 16 Out-of-frame Intra-chr q33.1 q32 91002 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNIP1-CAMK2A TNIP1 chr5 151060318 - CAMK2A chr5 150289723 - Exonic hg38 KIRC TCGA-BP-4965-01A 3 10 CDS-5'UTR Intra-chr q33.1 q32 91003 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCC-PSMD6 MCC chr5 113294329 - PSMD6 chr3 64010955 - Exonic hg38 KIRC TCGA-BP-4968-01A 56 97 Out-of-frame Inter-chr q22.2 Tumor suppressor gene p14.1 Seq+ 91004 ChimerSeq TCGA FAWG TCGA_RNA-Seq LARP1-FTL LARP1 chr5 154815348 + FTL chr19 48965563 + Exonic hg38 KIRC TCGA-BP-4972-01A 3 1 Out-of-frame Inter-chr q33.2 q13.33 Seq+ 91005 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGLN3-TERT EGLN3 chr14 34018601 - TERT chr5 1282624 - Exonic hg38 KIRC TCGA-BP-4973-01A 5 8 5'UTR-CDS Inter-chr q13.1 Tumor suppressor gene p15.33 Oncogene 91006 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIP12-SLC16A14 TRIP12 chr2 229858772 - SLC16A14 chr2 230037531 - Exonic hg38 KIRC TCGA-BP-4977-01A 17 27 In-Frame Intra-chr q36.3 q36.3 Seq+ 91007 ChimerSeq TCGA FAWG TCGA_RNA-Seq CECR2-EIF4ENIF1 CECR2 chr22 17369909 + EIF4ENIF1 chr22 31488745 - Exonic hg38 KIRC TCGA-BP-4981-01A 1 5 CDS-5'UTR Intra-chr q11.1 q12.2 91008 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLIS3-RCL1 GLIS3 chr9 4286038 - RCL1 chr9 4823548 + Exonic hg38 KIRC TCGA-BP-4983-01A 62 294 In-Frame Intra-chr p24.2 Transcription factor p24.1 Seq+ 91009 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANK1-CARM1P1 KANK1 chr9 713464 + CARM1P1 chr9 2948282 - Exonic hg38 KIRC TCGA-BP-4983-01A 43 167 Out-of-frame Intra-chr p24.3 Tumor suppressor gene p24.2 91010 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLG4-MARCH10 DLG4 chr17 7217118 - 2019_ 3_ 10_ chr17 62801752 - Exonic hg38 KIRC TCGA-BP-4983-01A 25 116 Out-of-frame Intra-chr p13.1 Tumor suppressor gene q23.2 Seq+ 91011 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANK1-TPD52L3 KANK1 chr9 540667 + TPD52L3 chr9 6330182 + Exonic hg38 KIRC TCGA-BP-4983-01A 23 70 5'UTR-CDS Intra-chr p24.3 Tumor suppressor gene p24.1 Seq+ 91012 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK8-JAK2 DOCK8 chr9 340321 + JAK2 chr9 5050686 + Exonic hg38 KIRC TCGA-BP-4983-01A 16 73 Out-of-frame Intra-chr p24.3 p24.1 TK:JakA Oncogene Seq+ 91013 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGAT5B-VMP1 MGAT5B chr17 76882298 + VMP1 chr17 59764971 + Exonic hg38 KIRC TCGA-BP-4983-01A 14 58 Out-of-frame Intra-chr q25.2 q23.1 Seq+ 91014 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2Z-TRIM37 UBE2Z chr17 48916187 + TRIM37 chr17 59012446 - Exonic hg38 KIRC TCGA-BP-4983-01A 12 48 Out-of-frame Intra-chr q21.32 q22 Seq+ 91015 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENDOV-TMEM104 ENDOV chr17 80423632 + TMEM104 chr17 74835927 + Exonic hg38 KIRC TCGA-BP-4983-01A 12 14 Out-of-frame Intra-chr q25.3 q25.1 Seq+ 91016 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNM3-STX8 PITPNM3 chr17 6503527 - STX8 chr17 9378653 - Exonic hg38 KIRC TCGA-BP-4983-01A 8 30 In-Frame Intra-chr p13.1 p13.1 Seq+ 91017 ChimerSeq TCGA FAWG TCGA_RNA-Seq AK3-DOCK8 AK3 chr9 4740937 - DOCK8 chr9 382513 + Exonic hg38 KIRC TCGA-BP-4983-01A 1 56 In-Frame Intra-chr p24.1 p24.3 Seq+ 91018 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL33-CBWD1 IL33 chr9 6256082 + CBWD1 chr9 173620 - Exonic hg38 KIRC TCGA-BP-4983-01A 8 3 Out-of-frame Intra-chr p24.1 p24.3 91019 ChimerSeq TCGA FAWG TCGA_RNA-Seq UHRF2-CBWD1 UHRF2 chr9 6421142 + CBWD1 chr9 121573 - Exonic hg38 KIRC TCGA-BP-4983-01A 1 19 Out-of-frame Intra-chr p24.1 Tumor suppressor gene p24.3 91020 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKAP1-DNAH17 SKAP1 chr17 48345905 - DNAH17 chr17 78485033 - Exonic hg38 KIRC TCGA-BP-4983-01A 4 4 In-Frame Intra-chr q21.32 q25.3 Seq+ 91021 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT7-NPLOC4 KAT7 chr17 49818011 + NPLOC4 chr17 81622278 - Exonic hg38 KIRC TCGA-BP-4983-01A 2 11 In-Frame Intra-chr q21.33 Transcription factor q25.3 Seq+ 91022 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPATA6L-GLIS3 SPATA6L chr9 4661899 - GLIS3 chr9 3937189 - Exonic hg38 KIRC TCGA-BP-4983-01A 2 9 In-Frame Intra-chr p24.1 p24.2 Transcription factor Seq+ 91023 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEPSIN-RHBDF2 TEPSIN chr17 81238514 - RHBDF2 chr17 76487909 - Exonic hg38 KIRC TCGA-BP-4983-01A 1 5 CDS-5'UTR Intra-chr q25.3 q25.1 91024 ChimerSeq TCGA FAWG TCGA_RNA-Seq C11orf95-CRTC1 C11orf95 chr11 63768484 - CRTC1 chr19 18742910 + Exonic hg38 KIRC TCGA-BP-4983-01A 1 3 Out-of-frame Inter-chr q13.1 Transcription factor p13.11 Oncogene 91025 ChimerSeq TCGA FAWG TCGA_RNA-Seq UHRF2-VLDLR UHRF2 chr9 6434173 + VLDLR chr9 2635453 + Exonic hg38 KIRC TCGA-BP-4983-01A 1 2 Out-of-frame Intra-chr p24.1 Tumor suppressor gene p24.2 91026 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD274-KANK1 CD274 chr9 5468208 + KANK1 chr9 676890 + Exonic hg38 KIRC TCGA-BP-4983-01A 1000 1000 5'UTR-5'UTR Intra-chr p24.1 Oncogene p24.3 Tumor suppressor gene 91027 ChimerSeq TCGA FAWG TCGA_RNA-Seq LLGL1-MARCH10 LLGL1 chr17 7217118 - 2019_ 3_ 10_ chr17 62801752 - Exonic hg38 KIRC TCGA-BP-4983-01A 1000 1000 Out-of-frame Intra-chr Tumor suppressor gene q23.2 91028 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMAN2-SPOCK1 LMAN2 chr5 177334284 - SPOCK1 chr5 137112561 - Exonic hg38 KIRC TCGA-BP-4986-01A 7 11 Out-of-frame Intra-chr q35.3 q31.2 Seq+ 91029 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAT2B-FBXL17 MAT2B chr5 163512196 + FBXL17 chr5 107881179 - Exonic hg38 KIRC TCGA-BP-4986-01A 1 20 Out-of-frame Intra-chr q34 q21.3 91030 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNIP1-NIPAL4 TNIP1 chr5 151062127 - NIPAL4 chr5 157463094 + Exonic hg38 KIRC TCGA-BP-4986-01A 4 6 Out-of-frame Intra-chr q33.1 q33.3 Seq+ 91031 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRDM6-NIPAL4 PRDM6 chr5 123159638 + NIPAL4 chr5 157463094 + Exonic hg38 KIRC TCGA-BP-4986-01A 3 8 In-Frame Intra-chr q23.2 Transcription factor q33.3 Seq+ 91032 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNPO1-RUFY1 TNPO1 chr5 72816752 + RUFY1 chr5 179605876 + Exonic hg38 KIRC TCGA-BP-4986-01A 1 12 CDS-3'UTR Intra-chr q13.2 91033 ChimerSeq TCGA FAWG TCGA_RNA-Seq SQSTM1-PDLIM7 SQSTM1 chr5 179824323 + PDLIM7 chr5 177496523 - Exonic hg38 KIRC TCGA-BP-4986-01A 2 7 3'UTR-3'UTR Intra-chr q35.3 q35.3 Seq+ 91034 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP3B1-DCTN4 AP3B1 chr5 78128030 - DCTN4 chr5 150756487 - Exonic hg38 KIRC TCGA-BP-4986-01A 1 4 In-Frame Intra-chr q14.1 q33.1 Seq+ 91035 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDCD6-TERT PDCD6 chr5 272772 + TERT chr5 1282624 - Exonic hg38 KIRC TCGA-BP-4991-01A 4 29 In-Frame Intra-chr p15.33 p15.33 Oncogene Seq+ 91036 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLPTM1L-PDCD6 CLPTM1L chr5 1320616 - PDCD6 chr5 304177 + Exonic hg38 KIRC TCGA-BP-4991-01A 1 20 3'UTR-CDS Intra-chr p15.33 p15.33 Seq+ 91037 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM172A-ERAP2 FAM172A chr5 94050731 - ERAP2 chr5 96915688 + Exonic hg38 KIRC TCGA-BP-5004-01A 2 14 Out-of-frame Intra-chr q15 Tumor suppressor gene q15 Seq+ 91038 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE1A-PPP1R1C PDE1A chr2 182426578 - PPP1R1C chr2 182061442 + Exonic hg38 KIRC TCGA-BP-5006-01A 6 27 Out-of-frame Intra-chr q32.1 q31.3 Seq+ 91039 ChimerSeq TCGA FAWG TCGA_RNA-Seq JMY-PAPD4 JMY chr5 79237682 + PAPD4 chr5 79619612 + Exonic hg38 KIRC TCGA-BP-5007-01A 2 4 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 91040 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK3-TKT DOCK3 chr3 50675300 + TKT chr3 53242242 - Exonic hg38 KIRC TCGA-BP-5170-01A 1 2 Out-of-frame Intra-chr p21.2 p21.1 Tumor suppressor gene 91041 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPCAT1-DAP LPCAT1 chr5 1523710 - DAP chr5 10683571 - Exonic hg38 KIRC TCGA-BP-5175-01A 19 66 3'UTR-CDS Intra-chr p15.2 Seq+ 91042 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLPTM1L-CDHR2 CLPTM1L chr5 1341671 - CDHR2 chr5 176581343 + Exonic hg38 KIRC TCGA-BP-5175-01A 13 57 3'UTR-CDS Intra-chr p15.33 q35.2 Seq+ 91043 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAIP2-CDC25C PAIP2 chr5 139341980 + CDC25C chr5 138292116 - Exonic hg38 KIRC TCGA-BP-5175-01A 8 69 5'UTR-CDS Intra-chr q31.2 Tumor suppressor gene q31.2 Seq+ 91044 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L4A-ATG10 EPB41L4A chr5 112418941 - ATG10 chr5 82252562 + Exonic hg38 KIRC TCGA-BP-5175-01A 3 29 In-Frame Intra-chr q22.2 q14.1 Seq+ 91045 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSRC1-MLF1 RSRC1 chr3 158203245 + MLF1 chr3 158592434 + Exonic hg38 KIRC TCGA-BP-5178-01A 40 54 In-Frame Intra-chr q25.32 q25.32 Seq+ 91046 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A17-EPN3 SLC25A17 chr22 40819195 - EPN3 chr17 50539187 + Exonic hg38 KIRC TCGA-BP-5186-01A 1 3 In-Frame Inter-chr q13.2 q21.33 Seq+ 91047 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLIS3-PLGRKT GLIS3 chr9 4117768 - PLGRKT chr9 5361888 - Exonic hg38 KIRC TCGA-BP-5192-01A 20 54 In-Frame Intra-chr p24.2 Transcription factor p24.1 Seq+ 91048 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTF1-CATSPER2 RTF1 chr15 41438431 + CATSPER2 chr15 43640496 - Exonic hg38 KIRC TCGA-BP-5192-01A 5 26 Out-of-frame Intra-chr q15.1 q15.3 Seq+ 91049 ChimerSeq TCGA FAWG TCGA_RNA-Seq CALCOCO2-ANKRD13A CALCOCO2 chr17 48849377 + ANKRD13A chr12 110024046 + Exonic hg38 KIRC TCGA-BP-5192-01A 6 6 Out-of-frame Inter-chr q21.32 q24.11 Seq+ 91050 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2K1-CUX1 MAP2K1 chr15 66387427 + CUX1 chr7 102227367 + Exonic hg38 KIRC TCGA-BP-5192-01A 2 14 Out-of-frame Inter-chr q22.31 STE:STE7 Oncogene q22.1 Tumor suppressor gene Transcription factor Seq+ 91051 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX19B-KCTD19 DDX19B chr16 70299354 + KCTD19 chr16 67320885 - Exonic hg38 KIRC TCGA-BP-5192-01A 1 15 In-Frame Intra-chr q22.1 q22.1 Seq+ 91052 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3IP-MYL4 RAB3IP chr12 69756663 + MYL4 chr17 47209389 + Exonic hg38 KIRC TCGA-BP-5192-01A 2 4 5'UTR-5'UTR Inter-chr q15 q21.32 Seq+ 91053 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF10-SLC26A5 RNF10 chr12 120566980 + SLC26A5 chr7 103379335 - Exonic hg38 KIRC TCGA-BP-5192-01A 1 8 Out-of-frame Inter-chr q24.31 q22.1 91054 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF213-RPTOR RNF213 chr17 80313167 + RPTOR chr17 80625691 + Exonic hg38 KIRC TCGA-BP-5198-01A 1 3 In-Frame Intra-chr q25.3 Oncogene q25.3 91055 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRLS1-NFX1 CRLS1 chr20 6015490 + NFX1 chr9 33328581 + Exonic hg38 KIRC TCGA-BP-5199-01A 2 2 In-Frame Inter-chr p12.3 p13.3 Transcription factor Seq+ 91056 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRL3-AMTN ADGRL3 chr4 61813889 + AMTN chr4 70523868 + Exonic hg38 KIRC TCGA-BP-5201-01A 2 7 Out-of-frame Intra-chr q13.1 Oncogene q13.3 91057 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERINC5-ZFYVE16 SERINC5 chr5 80202886 - ZFYVE16 chr5 80434109 + Exonic hg38 KIRC TCGA-BP-5202-01A 2 9 CDS-5'UTR Intra-chr q14.1 q14.1 Seq+ 91058 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTRC-HIF1AN BTRC chr10 101430452 + HIF1AN chr10 100536411 + Exonic hg38 KIRC TCGA-BP-5202-01A 1 8 In-Frame Intra-chr q24.32 q24.31 Seq+ 91059 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABI3BP-NBPF9 ABI3BP chr3 100774605 - NBPF9 chr1 149055899 - Exonic hg38 KIRC TCGA-CJ-4640-01A 32 104 Out-of-frame Inter-chr q12.2 q21.2 Seq+ 91060 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX33-NLRP1 DHX33 chr17 5460939 - NLRP1 chr17 5501872 - Exonic hg38 KIRC TCGA-CJ-4640-01A 5 30 Out-of-frame Intra-chr p13.2 p13.2 Oncogene Seq+ 91061 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL5-CCDC18 RPL5 chr1 92837633 + CCDC18 chr1 93221609 + Exonic hg38 KIRC TCGA-CJ-4868-01A 1 4 In-Frame Intra-chr p22.1 Tumor suppressor gene p22.1 Seq+ 91062 ChimerSeq TCGA FAWG TCGA_RNA-Seq GXYLT1-YAF2 GXYLT1 chr12 42129759 - YAF2 chr12 42161765 - Exonic hg38 KIRC TCGA-CJ-4869-01A 1 4 In-Frame Intra-chr q12 q12 91063 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJB4-NEXN DNAJB4 chr1 77979619 + NEXN chr1 77942023 + Exonic hg38 KIRC TCGA-CJ-4869-01A 1 3 5'UTR-CDS Intra-chr p31.1 Tumor suppressor gene p31.1 91064 ChimerSeq TCGA FAWG TCGA_RNA-Seq UFL1-HNRNPA1 UFL1 chr6 96521950 + HNRNPA1 chr12 54281795 + Exonic hg38 KIRC TCGA-CJ-4878-01A 4 3 Out-of-frame Inter-chr q16.1 Tumor suppressor gene q13.13 Seq+ 91065 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTWD2-SLMAP DTWD2 chr5 118928537 - SLMAP chr3 57831383 + Exonic hg38 KIRC TCGA-CJ-4884-01A 1 2 In-Frame Inter-chr q23.1 p14.3 91066 ChimerSeq TCGA FAWG TCGA_RNA-Seq APC-ALDH1L1 APC chr5 112707882 + ALDH1L1 chr3 126161002 - Exonic hg38 KIRC TCGA-CJ-4886-01A 10 49 Out-of-frame Inter-chr q22.2 Oncogene Tumor suppressor gene q21.3 Seq+ 91067 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCC-SLC9A9 MCC chr5 113294329 - SLC9A9 chr3 143832221 - Exonic hg38 KIRC TCGA-CJ-4886-01A 1 4 Out-of-frame Inter-chr q22.2 Tumor suppressor gene q24 Seq+ 91068 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS35-SMCO2 MRPS35 chr12 27724186 + SMCO2 chr12 27474786 + Exonic hg38 KIRC TCGA-CJ-4893-01A 2 6 In-Frame Intra-chr p11.22 p11.23 91069 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGD5-KPNA3 FGD5 chr3 14910929 + KPNA3 chr13 49706372 - Exonic hg38 KIRC TCGA-CJ-4895-01A 1 3 In-Frame Inter-chr p25.1 q14.2 Seq+ 91070 ChimerSeq TCGA FAWG TCGA_RNA-Seq TICAM1-VMP1 TICAM1 chr19 4831614 - VMP1 chr17 59811670 + Exonic hg38 KIRC TCGA-CJ-4901-01A 3 13 5'UTR-CDS Inter-chr p13.3 q23.1 Seq+ 91071 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS9-CFTR ADAMTS9 chr3 64867257 + CFTR chr7 117530899 + Exonic hg38 KIRC TCGA-CJ-4905-01A 7 61 5'UTR-CDS Inter-chr p14.1 Tumor suppressor gene q31.2 Tumor suppressor gene 91072 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST7-ANKRD7 ST7 chr7 116953691 + ANKRD7 chr7 118426977 + Exonic hg38 KIRC TCGA-CJ-4905-01A 1 11 CDS-3'UTR Intra-chr q31.2 Tumor suppressor gene q31.31 91073 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLMAP-ARF4 SLMAP chr3 57923023 + ARF4 chr3 57577387 - Exonic hg38 KIRC TCGA-CJ-4907-01A 1 10 In-Frame Intra-chr p14.3 p14.3 91074 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT8-MEIKIN SEPT8 chr5 132760802 - MEIKIN chr5 131911879 - Exonic hg38 KIRC TCGA-CJ-4916-01A 5 17 Out-of-frame Intra-chr q31.1 q31.1 91075 ChimerSeq TCGA FAWG TCGA_RNA-Seq BICC1-UBE2D1 BICC1 chr10 58513333 + UBE2D1 chr10 58361338 + Exonic hg38 KIRC TCGA-CJ-4918-01A 1 2 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 91076 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNF1B-ANAPC16 HNF1B chr17 37731595 - ANAPC16 chr10 72230366 + Exonic hg38 KIRC TCGA-CJ-4920-01A 2 9 5'UTR-5'UTR Inter-chr q12 Transcription factor q22.1 Seq+ 91077 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGRN-ISG15 AGRN chr1 1022462 + ISG15 chr1 1013984 + Exonic hg38 KIRC TCGA-CJ-4920-01A 2 3 Out-of-frame Intra-chr p36.33 p36.33 Tumor suppressor gene Seq+ 91078 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT1-PHKB CNOT1 chr16 58551589 - PHKB chr16 47562398 + Exonic hg38 KIRC TCGA-CJ-4923-01A 18 38 3'UTR-CDS Intra-chr q21 q12.1 91079 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIP12-SLC16A14 TRIP12 chr2 229858772 - SLC16A14 chr2 230037531 - Exonic hg38 KIRC TCGA-CJ-4923-01A 12 29 In-Frame Intra-chr q36.3 q36.3 Seq+ 91080 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPF2-RAPGEFL1 WIPF2 chr17 40219492 + RAPGEFL1 chr17 40181616 + Exonic hg38 KIRC TCGA-CJ-4923-01A 1 9 5'UTR-CDS Intra-chr q21.2 q21.1 Seq+ 91081 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB20-CMSS1 ZBTB20 chr3 114350274 - CMSS1 chr3 100146973 + Exonic hg38 KIRC TCGA-CJ-5671-01A 3 14 In-Frame Intra-chr q13.31 Transcription factor q12.1 Seq+ 91082 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASA1-PTP4A1P4 RASA1 chr5 87268990 + PTP4A1P4 chr5 86087821 + Exonic hg38 KIRC TCGA-CJ-5675-01A 7 10 Out-of-frame Intra-chr q14.3 q14.3 91083 ChimerSeq TCGA FAWG TCGA_RNA-Seq STRN3-METTL3 STRN3 chr14 30935163 - METTL3 chr14 21503881 - Exonic hg38 KIRC TCGA-CJ-5677-01A 4 25 In-Frame Intra-chr q12 q11.2 Seq+ 91084 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGLN3-SLC25A21 EGLN3 chr14 34018601 - SLC25A21 chr14 36875004 - Exonic hg38 KIRC TCGA-CJ-5678-01A 2 4 5'UTR-CDS Intra-chr q13.1 Tumor suppressor gene q13.3 91085 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC2A13-TERT SLC2A13 chr12 39951257 - TERT chr5 1282624 - Exonic hg38 KIRC TCGA-CJ-5680-01A 1 3 Out-of-frame Inter-chr q12 p15.33 Oncogene Seq+ 91086 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCX-PASD1 DCX chrX 111330904 - PASD1 chrX 151659713 + Exonic hg38 KIRC TCGA-CJ-5681-01A 98 356 Out-of-frame Intra-chr q23 q28 Seq+ 91087 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIST1H2AC-LHFPL2 HIST1H2AC chr6 26124749 + LHFPL2 chr5 78564871 - Exonic hg38 KIRC TCGA-CJ-5681-01A 19 42 3'UTR-5'UTR Inter-chr p22.2 q14.1 Seq+ 91088 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRIM1-TACR1 CRIM1 chr2 36522313 + TACR1 chr2 75120768 - Exonic hg38 KIRC TCGA-CJ-5681-01A 13 56 Out-of-frame Intra-chr p22.2 p12 Seq+ 91089 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPEAR-GABRA3 TSPEAR chr21 44517835 + GABRA3 chrX 152284735 - Exonic hg38 KIRC TCGA-CJ-5681-01A 17 39 Out-of-frame Inter-chr q22.3 q28 91090 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC10-ZCCHC16 TRAPPC10 chr21 44084263 + ZCCHC16 chrX 112454500 + Exonic hg38 KIRC TCGA-CJ-5681-01A 12 55 Out-of-frame Inter-chr q22.3 Seq+ 91091 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIP2A-THOC2 DIP2A chr21 46459222 + THOC2 chrX 123668314 - Exonic hg38 KIRC TCGA-CJ-5681-01A 18 27 Out-of-frame Inter-chr q22.3 q25 Seq+ 91092 ChimerSeq TCGA FAWG TCGA_RNA-Seq KHSRP-TFE3 KHSRP chr19 6415139 - TFE3 chrX 49038332 - Exonic hg38 KIRC TCGA-CJ-5681-01A 15 31 Out-of-frame Inter-chr p13.3 p11.23 Oncogene Transcription factor Seq+ 91093 ChimerSeq TCGA FAWG TCGA_RNA-Seq LHFPL2-HIST1H2AC LHFPL2 chr5 78632264 - HIST1H2AC chr6 26138054 + Exonic hg38 KIRC TCGA-CJ-5681-01A 6 57 5'UTR-3'UTR Inter-chr q14.1 p22.2 Seq+ 91094 ChimerSeq TCGA FAWG TCGA_RNA-Seq BACH1-TENM1 BACH1 chr21 29194260 + TENM1 chrX 124641991 - Exonic hg38 KIRC TCGA-CJ-5681-01A 10 35 5'UTR-CDS Inter-chr q21.3 Transcription factor q25 91095 ChimerSeq TCGA FAWG TCGA_RNA-Seq GABRA3-DIAPH2 GABRA3 chrX 152208001 - DIAPH2 chrX 97348081 + Exonic hg38 KIRC TCGA-CJ-5681-01A 7 44 Out-of-frame Intra-chr q28 q21.33 Seq+ 91096 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB21-PFKL ZBTB21 chr21 42010252 - PFKL chr21 44306681 + Exonic hg38 KIRC TCGA-CJ-5681-01A 12 14 5'UTR-CDS Intra-chr q22.3 Transcription factor q22.3 Seq+ 91097 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGSF1-DSCAM IGSF1 chrX 131578668 - DSCAM chr21 40189238 - Exonic hg38 KIRC TCGA-CJ-5681-01A 8 27 5'UTR-CDS Inter-chr q26.2 q22.2 91098 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLAC1-DSCAM PLAC1 chrX 134602051 - DSCAM chr21 40189238 - Exonic hg38 KIRC TCGA-CJ-5681-01A 8 20 5'UTR-CDS Inter-chr q26.3 q22.2 Seq+ 91099 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGSF1-PLAC1 IGSF1 chrX 131578668 - PLAC1 chrX 134602122 - Exonic hg38 KIRC TCGA-CJ-5681-01A 5 11 5'UTR-5'UTR Intra-chr q26.2 q26.3 91100 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB21-AIRE ZBTB21 chr21 42010252 - AIRE chr21 44296383 + Exonic hg38 KIRC TCGA-CJ-5681-01A 6 4 5'UTR-CDS Intra-chr q22.3 Transcription factor q22.3 Transcription factor Seq+ 91101 ChimerSeq TCGA FAWG TCGA_RNA-Seq CXADR-CMC4 CXADR chr21 17513172 + CMC4 chrX 155064033 - Exonic hg38 KIRC TCGA-CJ-5681-01A 3 15 CDS-5'UTR Inter-chr q21.1 q28 Seq+ 91102 ChimerSeq TCGA FAWG TCGA_RNA-Seq CXADR-MTCP1 CXADR chr21 17513172 + MTCP1 chrX 155064033 - Exonic hg38 KIRC TCGA-CJ-5681-01A 3 15 CDS-3'UTR Inter-chr q21.1 q28 91103 ChimerSeq TCGA FAWG TCGA_RNA-Seq HUNK-MAMLD1 HUNK chr21 31873935 + MAMLD1 chrX 150469745 + Exonic hg38 KIRC TCGA-CJ-5681-01A 5 7 In-Frame Inter-chr q22.11 CAMK:CAMKL q28 Seq+ 91104 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2CD2-MID2 C2CD2 chr21 41953370 - MID2 chrX 107840670 + Exonic hg38 KIRC TCGA-CJ-5681-01A 2 14 Out-of-frame Inter-chr q22.3 q22.3 Seq+ 91105 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM164-NDUFV3 TMEM164 chrX 110173453 + NDUFV3 chr21 42908864 + Exonic hg38 KIRC TCGA-CJ-5681-01A 1 13 3'UTR-CDS Inter-chr q23 q22.3 91106 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIP2A-THOC2 DIP2A chr21 46463228 + THOC2 chrX 123668314 - Exonic hg38 KIRC TCGA-CJ-5681-01A 1 12 Out-of-frame Inter-chr q22.3 q25 Seq+ 91107 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K7CL-VAMP7 MAP3K7CL chr21 29085917 + VAMP7 chrY 57082143 + Exonic hg38 KIRC TCGA-CJ-5681-01A 1 4 Out-of-frame Inter-chr q21.3 q28 91108 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFTPH-THRB AFTPH chr2 64585545 + THRB chr3 24152490 - Exonic hg38 KIRC TCGA-CJ-5681-01A 1 3 Out-of-frame Inter-chr p14 p24.2 Tumor suppressor gene Transcription factor Seq+ 91109 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKNOX1-H2BFM PKNOX1 chr21 42974664 + H2BFM chrX 104040828 + Exonic hg38 KIRC TCGA-CJ-5681-01A 1000 1000 5'UTR-CDS Inter-chr q22.3 Tumor suppressor gene Transcription factor q22.2 Seq+ 91110 ChimerSeq TCGA FAWG TCGA_RNA-Seq WSCD1-NLRP1 WSCD1 chr17 6095223 + NLRP1 chr17 5501872 - Exonic hg38 KIRC TCGA-CJ-5684-01A 4 10 Out-of-frame Intra-chr p13.2 p13.2 Oncogene Seq+ 91111 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGLN3-SLC25A21 EGLN3 chr14 34018601 - SLC25A21 chr14 36875004 - Exonic hg38 KIRC TCGA-CW-5581-01A 63 196 5'UTR-CDS Intra-chr q13.1 Tumor suppressor gene q13.3 91112 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAD3-SLC9A9 SMAD3 chr15 67066360 + SLC9A9 chr3 143268989 - Exonic hg38 KIRC TCGA-CW-5581-01A 28 115 Out-of-frame Inter-chr q22.33 Transcription factor q24 Seq+ 91113 ChimerSeq TCGA FAWG TCGA_RNA-Seq AASDH-CC2D2A AASDH chr4 56378148 - CC2D2A chr4 15563355 + Exonic hg38 KIRC TCGA-CW-5581-01A 5 19 In-Frame Intra-chr q12 p15.32 Seq+ 91114 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP8A1-LDB2 ATP8A1 chr4 42656825 - LDB2 chr4 16759260 - Exonic hg38 KIRC TCGA-CW-5581-01A 5 7 Out-of-frame Intra-chr p13 p15.32 Seq+ 91115 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPZ1-ONECUT2 COPZ1 chr12 54325181 + ONECUT2 chr18 57476437 + Exonic hg38 KIRC TCGA-CW-5581-01A 3 1 Out-of-frame Inter-chr q13.13 q21.31 Transcription factor Seq+ 91116 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCC3-BCAN ABCC3 chr17 50673658 + BCAN chr1 156657675 + Exonic hg38 KIRC TCGA-CW-5584-01A 6 11 In-Frame Inter-chr q21.33 q23.1 Seq+ 91117 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELOVL5-GSTA6P ELOVL5 chr6 53348817 - GSTA6P chr6 52806753 - Exonic hg38 KIRC TCGA-CW-5588-01A 4 6 Out-of-frame Intra-chr p12.1 p12.2 91118 ChimerSeq TCGA FAWG TCGA_RNA-Seq DMGDH-NMNAT2 DMGDH chr5 79005273 - NMNAT2 chr1 183261303 - Exonic hg38 KIRC TCGA-CW-5589-01A 16 46 In-Frame Inter-chr q14.1 q25.3 Seq+ 91119 ChimerSeq TCGA FAWG TCGA_RNA-Seq WSCD1-NLRP1 WSCD1 chr17 6095223 + NLRP1 chr17 5501872 - Exonic hg38 KIRC TCGA-CW-5590-01A 65 306 Out-of-frame Intra-chr p13.2 p13.2 Oncogene Seq+ 91120 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLGAP4-TMEM189 DLGAP4 chr20 36462599 + TMEM189 chr20 50130947 - Exonic hg38 KIRC TCGA-CW-6087-01A 4 11 In-Frame Intra-chr q11.23 q13.13 Seq+ 91121 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAD3-DLGAP4 SMAD3 chr15 67066360 + DLGAP4 chr20 36496705 + Exonic hg38 KIRC TCGA-CW-6087-01A 3 9 Out-of-frame Inter-chr q22.33 Transcription factor q11.23 Seq+ 91122 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXP1-AS3 FOXP1 chr3 71299820 - AS3 chr3 6635197 - Exonic hg38 KIRC TCGA-CW-6090-01A 2 20 Out-of-frame Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor Tumor suppressor gene 91123 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF2-AGO3 ARHGEF2 chr1 155957713 - AGO3 chr1 35966955 + Exonic hg38 KIRC TCGA-CW-6097-01A 1 7 In-Frame Intra-chr q22 p34.3 91124 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAMBP-AQP4 STAMBP chr2 73831059 + AQP4 chr18 26862596 - Exonic hg38 KIRC TCGA-CZ-4854-01A 2 1 In-Frame Inter-chr p13.1 q11.2 Seq+ 91125 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST7-EXOC4 ST7 chr7 117015014 + EXOC4 chr7 133630045 + Exonic hg38 KIRC TCGA-CZ-4860-01A 1 8 In-Frame Intra-chr q31.2 Tumor suppressor gene q33 Seq+ 91126 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFMBT1-ABHD5 SFMBT1 chr3 53018086 - ABHD5 chr3 43702215 + Exonic hg38 KIRC TCGA-CZ-4861-01A 4 31 5'UTR-5'UTR Intra-chr p21.1 p21.33 Seq+ 91127 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC41-FAM159A LRRC41 chr1 46297563 - FAM159A chr1 52642863 + Exonic hg38 KIRC TCGA-CZ-4863-01A 67 251 Out-of-frame Intra-chr p33 p32.3 Seq+ 91128 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO34-RALYL FBXO34 chr14 55271537 + RALYL chr8 84774579 + Exonic hg38 KIRC TCGA-CZ-4865-01A 3 23 5'UTR-5'UTR Inter-chr q22.3 q21.2 Seq+ 91129 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKAB2-FBP2 PRKAB2 chr1 147171989 - FBP2 chr9 94587469 - Exonic hg38 KIRC TCGA-CZ-5452-01A 3 15 Out-of-frame Inter-chr q21.1 q22.32 Seq+ 91130 ChimerSeq TCGA FAWG TCGA_RNA-Seq REEP5-ARHGEF3 REEP5 chr5 112921163 - ARHGEF3 chr3 57035176 - Exonic hg38 KIRC TCGA-CZ-5456-01A 1 15 CDS-5'UTR Inter-chr q22.2 p14.3 91131 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXNB2-NDUFA4L2 PLXNB2 chr22 50285800 - NDUFA4L2 chr12 57237335 - Exonic hg38 KIRC TCGA-CZ-5460-01A 1 1 CDS-5'UTR Inter-chr q13.33 q13.3 91132 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOMM70-IL17RD TOMM70 chr3 100400626 - IL17RD chr3 57120313 - Exonic hg38 KIRC TCGA-CZ-5467-01A 1 8 In-Frame Intra-chr q12.2 p14.3 Tumor suppressor gene 91133 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAE1-WDR18 SAE1 chr19 47155213 + WDR18 chr19 994020 + Exonic hg38 KIRC TCGA-CZ-5468-01A 16 117 In-Frame Intra-chr q13.32 p13.3 Seq+ 91134 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAS1L-MSN LAS1L chrX 65531357 - MSN chrX 65600662 + Exonic hg38 KIRC TCGA-CZ-5468-01A 6 5 CDS-5'UTR Intra-chr q12 q12 91135 ChimerSeq TCGA FAWG TCGA_RNA-Seq VHL-CFAP97 VHL chr3 10146636 + CFAP97 chr4 185207791 - Exonic hg38 KIRC TCGA-CZ-5468-01A 2 20 CDS-5'UTR Inter-chr p25.3 Oncogene Tumor suppressor gene q35.1 91136 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM13A-GAB1 FAM13A chr4 88805011 - GAB1 chr4 143415477 + Exonic hg38 KIRC TCGA-CZ-5469-01A 1 3 Out-of-frame Intra-chr q22.1 q31.21 91137 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPN15-MCRIP2 CAPN15 chr16 533998 + MCRIP2 chr16 647417 + Exonic hg38 KIRC TCGA-CZ-5470-01A 1 1 5'UTR-5'UTR Intra-chr p13.3 p13.3 91138 ChimerSeq TCGA FAWG TCGA_RNA-Seq HS3ST1-CNTN5 HS3ST1 chr4 11428699 - CNTN5 chr11 99556145 + Exonic hg38 KIRC TCGA-CZ-5982-01A 3 19 5'UTR-5'UTR Inter-chr p15.33 q22.1 Seq+ 91139 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS8L2-RIOK1 EPS8L2 chr11 709608 + RIOK1 chr6 7412889 + Exonic hg38 KIRC TCGA-DV-5567-01A 1 1 Out-of-frame Inter-chr p15.5 p24.3 Atypical:RIO 91140 ChimerSeq TCGA FAWG TCGA_RNA-Seq VHL-TATDN2 VHL chr3 10146636 + TATDN2 chr3 10270131 + Exonic hg38 KIRC TCGA-DV-5575-01A 4 26 Out-of-frame Intra-chr p25.3 Oncogene Tumor suppressor gene p25.3 91141 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0319L-GOLGA1 KIAA0319L chr1 35506612 - GOLGA1 chr9 124890478 - Exonic hg38 KIRC TCGA-DV-5576-01A 17 56 In-Frame Inter-chr p34.3 q33.3 Seq+ 91142 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLGA1-WDR38 GOLGA1 chr9 124898549 - WDR38 chr9 124854205 + Exonic hg38 KIRC TCGA-DV-5576-01A 4 11 In-Frame Intra-chr q33.3 q33.3 Seq+ 91143 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIT1-MFSD2A TRIT1 chr1 39883318 - MFSD2A chr1 39957087 + Exonic hg38 KIRC TCGA-EU-5906-01A 13 37 In-Frame Intra-chr p34.2 Tumor suppressor gene p34.2 Tumor suppressor gene Seq+ 91144 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD4B-LMOD3 FRMD4B chr3 69287752 - LMOD3 chr3 69109121 - Exonic hg38 KIRC TCGA-EU-5907-01A 3 10 In-Frame Intra-chr p14.1 p14.1 91145 ChimerSeq TCGA FAWG TCGA_RNA-Seq NMT1-HIGD1B NMT1 chr17 45061460 + HIGD1B chr17 44848102 + Exonic hg38 KIRP TCGA-2Z-A9J3-01A 7 72 CDS-5'UTR Intra-chr q21.31 q21.31 Seq+ 91146 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC2-RHOT1 TANC2 chr17 63267873 + RHOT1 chr17 32253085 + Exonic hg38 KIRP TCGA-2Z-A9JI-01A 6 208 CDS-3'UTR Intra-chr q23.2 q11.2 Seq+ 91147 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K3-BRIP1 MAP3K3 chr17 63667060 + BRIP1 chr17 61686165 - Exonic hg38 KIRP TCGA-2Z-A9JI-01A 11 10 In-Frame Intra-chr q23.3 STE:STE11 q23.2 Oncogene Seq+ 91148 ChimerSeq TCGA FAWG TCGA_RNA-Seq EML4-ALK EML4 chr2 42245687 + ALK chr2 29223528 - Exonic hg38 KIRP TCGA-2Z-A9JJ-01A 9 37 In-Frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 91149 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS1-MMP23A INTS1 chr7 1483742 - MMP23A chr1 1700461 + Exonic hg38 KIRP TCGA-2Z-A9JJ-01A 14 0 CDS-5'UTR Inter-chr p22.3 p36.33 Seq+ 91150 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTMR12-CARD6 MTMR12 chr5 32312758 - CARD6 chr5 40841474 + Exonic hg38 KIRP TCGA-2Z-A9JJ-01A 6 12 Out-of-frame Intra-chr p13.3 p13.1 Seq+ 91151 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1QTNF3-CLPTM1L C1QTNF3 chr5 34028754 - CLPTM1L chr5 1318453 - Exonic hg38 KIRP TCGA-2Z-A9JJ-01A 5 14 3'UTR-3'UTR Intra-chr p13.2 p15.33 Seq+ 91152 ChimerSeq TCGA FAWG TCGA_RNA-Seq U2AF2-TFE3 U2AF2 chr19 55669622 + TFE3 chrX 49040568 - Exonic hg38 KIRP TCGA-2Z-A9JO-01A 13 15 Out-of-frame Inter-chr q13.42 p11.23 Oncogene Transcription factor Seq+ 91153 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF420-SULT2B1 ZNF420 chr19 37008082 + SULT2B1 chr19 48575941 + Exonic hg38 KIRP TCGA-4A-A93Y-01A 2 16 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.33 Seq+ 91154 ChimerSeq TCGA FAWG TCGA_RNA-Seq VCAM1-CDC14A VCAM1 chr1 100734768 + CDC14A chr1 100518251 + Exonic hg38 KIRP TCGA-5P-A9JU-01A 1 4 Out-of-frame Intra-chr p21.2 p21.2 91155 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRPK2-PRKAR2B SRPK2 chr7 105160507 - PRKAR2B chr7 107150922 + Exonic hg38 KIRP TCGA-5P-A9JZ-01A 127 351 CDS-3'UTR Intra-chr q22.3 CMGC:SRPK Seq+ 91156 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRPK2-ZC3HC1 SRPK2 chr7 105160507 - ZC3HC1 chr7 130049144 - Exonic hg38 KIRP TCGA-5P-A9JZ-01A 9 46 Out-of-frame Intra-chr q22.3 CMGC:SRPK q32.2 Seq+ 91157 ChimerSeq TCGA FAWG TCGA_RNA-Seq SND1-AKAP9 SND1 chr7 127807573 + AKAP9 chr7 92105678 + Exonic hg38 KIRP TCGA-5P-A9JZ-01A 6 14 Out-of-frame Intra-chr q32.1 q21.2 Oncogene Seq+ 91158 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRAF-CUL1 BRAF chr7 140850111 - CUL1 chr7 148729962 + Exonic hg38 KIRP TCGA-5P-A9JZ-01A 4 9 CDS-5'UTR Intra-chr q34 TKL:RAF Oncogene q36.1 Tumor suppressor gene Seq+ 91159 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCK2-SLC26A4 ADCK2 chr7 140689725 + SLC26A4 chr7 107661639 + Exonic hg38 KIRP TCGA-5P-A9JZ-01A 1 20 CDS-5'UTR Intra-chr q34 Atypical:ABC1 q22.3 91160 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK4-NRCAM DOCK4 chr7 112206102 - NRCAM chr7 108312731 - Exonic hg38 KIRP TCGA-5P-A9JZ-01A 2 6 CDS-5'UTR Intra-chr q31.1 q31.1 Tumor suppressor gene Seq+ 91161 ChimerSeq TCGA FAWG TCGA_RNA-Seq COBL-ELDR COBL chr7 51172456 - ELDR chr7 55238666 - Exonic hg38 KIRP TCGA-5P-A9JZ-01A 1 5 CDS-3'UTR Intra-chr p12.1 91162 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACBD5-ANKRD26 ACBD5 chr10 27231748 - ANKRD26 chr10 26995147 - Exonic hg38 KIRP TCGA-5P-A9K9-01A 6 28 CDS-3'UTR Intra-chr p12.1 p12.1 Seq+ 91163 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806934 + TACC3 chr4 1739702 + Exonic hg38 KIRP TCGA-A4-7287-01A 1350 3342 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 91164 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBMS1-CCDC148 RBMS1 chr2 160367216 - CCDC148 chr2 158313894 - Exonic hg38 KIRP TCGA-A4-7585-01A 2 20 In-Frame Intra-chr q24.2 q24.1 Seq+ 91165 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUDT19-TDRD12 NUDT19 chr19 32692674 + TDRD12 chr19 32818089 + Exonic hg38 KIRP TCGA-A4-7585-01A 1 5 Out-of-frame Intra-chr q13.11 q13.11 91166 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMD4A-TIMM9 SAMD4A chr14 54568112 + TIMM9 chr14 58411971 - Exonic hg38 KIRP TCGA-A4-7997-01A 2 15 CDS-5'UTR Intra-chr q22.2 q23.1 Seq+ 91167 ChimerSeq TCGA FAWG TCGA_RNA-Seq TYW1B-VWC2 TYW1B chr7 72807066 - VWC2 chr7 49912034 + Exonic hg38 KIRP TCGA-A4-A4ZT-01A 6 2 Out-of-frame Intra-chr q11.23 p12.2 Seq+ 91168 ChimerSeq TCGA FAWG TCGA_RNA-Seq CFLAR-AGBL5 CFLAR chr2 201133134 + AGBL5 chr2 27067494 + Exonic hg38 KIRP TCGA-A4-A5Y0-01A 32 67 Out-of-frame Intra-chr q33.1 p23.3 Seq+ 91169 ChimerSeq TCGA FAWG TCGA_RNA-Seq INPP1-HECW2 INPP1 chr2 190360306 + HECW2 chr2 196433458 - Exonic hg38 KIRP TCGA-A4-A5Y0-01A 15 19 CDS-5'UTR Intra-chr q32.2 q32.3 Seq+ 91170 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2E3-CDC42EP3 UBE2E3 chr2 180984093 + CDC42EP3 chr2 37646822 - Exonic hg38 KIRP TCGA-A4-A5Y0-01A 5 20 CDS-5'UTR Intra-chr q31.3 p22.2 Seq+ 91171 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASAL1-DDX54 RASAL1 chr12 113114800 - DDX54 chr12 113166032 - Exonic hg38 KIRP TCGA-A4-A5Y0-01A 5 6 Out-of-frame Intra-chr q24.13 Tumor suppressor gene q24.13 Seq+ 91172 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC27-ARHGEF33 TTC27 chr2 32634005 + ARHGEF33 chr2 38919363 + Exonic hg38 KIRP TCGA-A4-A5Y0-01A 1 11 CDS-5'UTR Intra-chr p22.3 p22.1 Seq+ 91173 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC27-MORN2 TTC27 chr2 32634005 + MORN2 chr2 38919363 + Exonic hg38 KIRP TCGA-A4-A5Y0-01A 1 11 CDS-3'UTR Intra-chr p22.3 p22.1 91174 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD44-FASTKD1 ANKRD44 chr2 197310578 - FASTKD1 chr2 169557297 - Exonic hg38 KIRP TCGA-A4-A5Y0-01A 1 3 Out-of-frame Intra-chr q33.1 q31.1 Seq+ 91175 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK39-CCDC150 STK39 chr2 168129541 - CCDC150 chr2 196718503 + Exonic hg38 KIRP TCGA-AL-3466-01A 1 1 In-Frame Intra-chr q24.3 q33.1 91176 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKAR-PMS1 ANKAR chr2 189674830 + PMS1 chr2 189863743 + Exonic hg38 KIRP TCGA-B3-4104-01A 1 17 5'UTR-5'UTR Intra-chr q32.2 q32.2 Oncogene 91177 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP9-ZNF3 AKAP9 chr7 91941147 + ZNF3 chr7 100077433 - Exonic hg38 KIRP TCGA-B9-4116-01A 19 110 CDS-5'UTR Intra-chr q21.2 Oncogene q22.1 Transcription factor Seq+ 91178 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3HC1-ADAM22 ZC3HC1 chr7 130051221 - ADAM22 chr7 88075626 + Exonic hg38 KIRP TCGA-B9-4116-01A 3 27 In-Frame Intra-chr q32.2 q21.12 Seq+ 91179 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK4-BCAP29 DOCK4 chr7 112206102 - BCAP29 chr7 107583882 + Exonic hg38 KIRP TCGA-B9-4116-01A 2 12 CDS-3'UTR Intra-chr q31.1 Seq+ 91180 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAM22-ASB4 ADAM22 chr7 88125659 + ASB4 chr7 95537571 + Exonic hg38 KIRP TCGA-B9-4116-01A 3 3 In-Frame Intra-chr q21.12 q21.3 Seq+ 91181 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNC1I1-ZC3HAV1 DYNC1I1 chr7 95828116 + ZC3HAV1 chr7 139089759 - Exonic hg38 KIRP TCGA-B9-4116-01A 2 7 In-Frame Intra-chr q21.3 q34 Seq+ 91182 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNKS-RHOT1 TNKS chr8 9680800 + RHOT1 chr17 32253085 + Exonic hg38 KIRP TCGA-B9-4117-01A 31 180 5'UTR-3'UTR Inter-chr p23.1 q11.2 Seq+ 91183 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCA7-COL5A3 ABCA7 chr19 1059085 + COL5A3 chr19 10004145 - Exonic hg38 KIRP TCGA-B9-A44B-01A 4 80 In-Frame Intra-chr p13.3 p13.2 Seq+ 91184 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNRPA-ANKRD24 SNRPA chr19 40751481 + ANKRD24 chr19 4199683 + Exonic hg38 KIRP TCGA-B9-A44B-01A 3 25 Out-of-frame Intra-chr q13.2 p13.3 Seq+ 91185 ChimerSeq TCGA FAWG TCGA_RNA-Seq C7orf50-CD177 C7orf50 chr7 1127257 - CD177 chr19 43353853 + Exonic hg38 KIRP TCGA-B9-A44B-01A 3 17 Out-of-frame Inter-chr p22.3 q13.31 Seq+ 91186 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRUNE2-HDAC9 PRUNE2 chr9 76703337 - HDAC9 chr7 18644671 + Exonic hg38 KIRP TCGA-B9-A44B-01A 1 3 Out-of-frame Inter-chr q21.2 p21.1 Seq+ 91187 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD33B-NIPBL ANKRD33B chr5 10564833 + NIPBL chr5 37058891 + Exonic hg38 KIRP TCGA-B9-A5W9-01A 34 123 In-Frame Intra-chr p15.2 p13.2 Seq+ 91188 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMBRD2-ADAMTS12 LMBRD2 chr5 36108534 - ADAMTS12 chr5 33751548 - Exonic hg38 KIRP TCGA-B9-A5W9-01A 11 83 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 91189 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFS4-TMPRSS2 NDUFS4 chr5 53658624 + TMPRSS2 chr21 41466153 - Exonic hg38 KIRP TCGA-B9-A5W9-01A 6 52 Out-of-frame Inter-chr q11.2 q22.3 Seq+ 91190 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP5J-HCN1 ATP5J chr21 25734853 - HCN1 chr5 45462007 - Exonic hg38 KIRP TCGA-B9-A5W9-01A 13 14 Out-of-frame Inter-chr q21.3 p12 Seq+ 91191 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYRK1A-HUNK DYRK1A chr21 37420384 + HUNK chr21 31924468 + Exonic hg38 KIRP TCGA-B9-A5W9-01A 7 20 Out-of-frame Intra-chr q22.13 CMGC:DYRK q22.11 CAMK:CAMKL Seq+ 91192 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA2-RNF180 ITGA2 chr5 52989532 + RNF180 chr5 64325186 + Exonic hg38 KIRP TCGA-B9-A5W9-01A 1 26 Out-of-frame Intra-chr q11.2 q12.3 Tumor suppressor gene Seq+ 91193 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRD5A1-C1QTNF3 SRD5A1 chr5 6633869 + C1QTNF3 chr5 34035758 - Exonic hg38 KIRP TCGA-B9-A5W9-01A 3 13 Out-of-frame Intra-chr p15.31 p13.2 Seq+ 91194 ChimerSeq TCGA FAWG TCGA_RNA-Seq EVA1C-TMEM50B EVA1C chr21 32413013 + TMEM50B chr21 33432802 - Exonic hg38 KIRP TCGA-B9-A5W9-01A 4 6 5'UTR-5'UTR Intra-chr q22.11 Seq+ 91195 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCBP3-GRIK1 PCBP3 chr21 45643868 + GRIK1 chr21 29598937 - Exonic hg38 KIRP TCGA-B9-A5W9-01A 3 7 5'UTR-CDS Intra-chr q22.3 q21.3 Seq+ 91196 ChimerSeq TCGA FAWG TCGA_RNA-Seq POFUT2-SLC19A1 POFUT2 chr21 45285678 - SLC19A1 chr21 45498612 - Exonic hg38 KIRP TCGA-B9-A5W9-01A 1 12 3'UTR-3'UTR Intra-chr q22.3 q22.3 91197 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRWD1-KIF2A BRWD1 chr21 39312841 - KIF2A chr5 62347130 + Exonic hg38 KIRP TCGA-B9-A5W9-01A 1 2 Out-of-frame Inter-chr q22.2 q12.1 91198 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUL9-KIF6 CUL9 chr6 43188715 + KIF6 chr6 39343815 - Exonic hg38 KIRP TCGA-B9-A69E-01A 217 807 In-Frame Intra-chr p21.1 p21.2 Seq+ 91199 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNK5-RUNX2 KCNK5 chr6 39194169 - RUNX2 chr6 45512246 + Exonic hg38 KIRP TCGA-B9-A69E-01A 2 4 In-Frame Intra-chr p21.2 p21.1 Tumor suppressor gene Transcription factor Seq+ 91200 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFEB-CADM2 TFEB chr6 41686090 - CADM2 chr3 85802047 + Exonic hg38 KIRP TCGA-B9-A69E-01A 2 2 Out-of-frame Inter-chr p21.1 Transcription factor p12.1 Tumor suppressor gene 91201 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC22A5-RAD50 SLC22A5 chr5 132387151 + RAD50 chr5 132640672 + Exonic hg38 KIRP TCGA-BQ-5876-01A 10 23 In-Frame Intra-chr q31.1 q31.1 Oncogene Seq+ 91202 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPP1-CLU SPP1 chr4 87980434 + CLU chr8 27606524 - Exonic hg38 KIRP TCGA-BQ-5876-01A 1 7 In-Frame Inter-chr q22.1 p21.1 Tumor suppressor gene 91203 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3GAP1-LRP1B RAB3GAP1 chr2 135093693 + LRP1B chr2 140982276 - Exonic hg38 KIRP TCGA-BQ-5878-01A 5 8 Out-of-frame Intra-chr q21.3 q22.2 Oncogene Tumor suppressor gene Seq+ 91204 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBMS1-AOX3P RBMS1 chr2 160278548 - AOX3P chr2 200722978 + Exonic hg38 KIRP TCGA-BQ-5878-01A 3 10 Out-of-frame Intra-chr q24.2 q33.1 Seq+ 91205 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBMS1-AOX2P RBMS1 chr2 160278548 - AOX2P chr2 200722978 + Exonic hg38 KIRP TCGA-BQ-5878-01A 3 8 Out-of-frame Intra-chr q24.2 q33.1 91206 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC47A2-ULK2 SLC47A2 chr17 19718111 - ULK2 chr17 19771067 - Exonic hg38 KIRP TCGA-BQ-5880-01A 1 23 3'UTR-3'UTR Intra-chr p11.2 p11.2 Other:ULK Seq+ 91207 ChimerSeq TCGA FAWG TCGA_RNA-Seq REPS2-HBQ1 REPS2 chrX 17006344 + HBQ1 chr16 180666 + Exonic hg38 KIRP TCGA-BQ-5880-01A 1 3 Out-of-frame Inter-chr p22.2 p13.3 91208 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFE3-PRCC TFE3 chrX 49039107 - PRCC chr1 156782282 + Exonic hg38 KIRP TCGA-BQ-5882-01A 49 172 In-Frame Inter-chr p11.23 Oncogene Transcription factor q23.1 KB Seq+ 91209 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRCC-TFE3 PRCC chr1 156768239 + TFE3 chrX 49038442 - Exonic hg38 KIRP TCGA-BQ-5882-01A 50 142 In-Frame Inter-chr q23.1 p11.23 Oncogene Transcription factor KB Pub Seq+ 91210 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFE3-PRCC TFE3 chrX 49039107 - PRCC chr1 156786608 + Exonic hg38 KIRP TCGA-BQ-5887-01A 15 74 In-Frame Inter-chr p11.23 Oncogene Transcription factor q23.1 KB Seq+ 91211 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRCC-TFE3 PRCC chr1 156768239 + TFE3 chrX 49038442 - Exonic hg38 KIRP TCGA-BQ-5887-01A 18 43 In-Frame Inter-chr q23.1 p11.23 Oncogene Transcription factor KB Pub Seq+ 91212 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEF2K-ACSM3 EEF2K chr16 22251322 + ACSM3 chr16 20769984 + Exonic hg38 KIRP TCGA-BQ-5887-01A 3 8 5'UTR-5'UTR Intra-chr p12.2 p12.3 Seq+ 91213 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUPT7L-RBKS SUPT7L chr2 27662179 - RBKS chr2 27781788 - Exonic hg38 KIRP TCGA-BQ-5889-01A 3 19 Out-of-frame Intra-chr p23.3 p23.2 Seq+ 91214 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLCF1-PPP1CA CLCF1 chr11 67373524 - PPP1CA chr11 67401199 - Exonic hg38 KIRP TCGA-BQ-5890-01A 9 139 In-Frame Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 91215 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRI1-MYO1F MRI1 chr19 13769048 + MYO1F chr19 8522829 - Exonic hg38 KIRP TCGA-BQ-5890-01A 15 37 In-Frame Intra-chr p13.13 p13.2 Seq+ 91216 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKMYT1-CLDN6 PKMYT1 chr16 2976664 - CLDN6 chr16 3016042 - Exonic hg38 KIRP TCGA-BQ-5890-01A 6 44 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 91217 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF627-MRI1 ZNF627 chr19 11604364 + MRI1 chr19 13768561 + Exonic hg38 KIRP TCGA-BQ-5890-01A 4 22 5'UTR-5'UTR Intra-chr p13.2 Transcription factor p13.13 Seq+ 91218 ChimerSeq TCGA FAWG TCGA_RNA-Seq PNPLA7-EXD3 PNPLA7 chr9 137521636 - EXD3 chr9 137373599 - Exonic hg38 KIRP TCGA-BQ-5890-01A 4 12 In-Frame Intra-chr q34.3 q34.3 Seq+ 91219 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R18-MDC1 PPP1R18 chr6 30687114 - MDC1 chr6 30700632 - Exonic hg38 KIRP TCGA-BQ-5891-01A 16 76 5'UTR-5'UTR Intra-chr p21.33 Tumor suppressor gene Seq+ 91220 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFEB-COL21A1 TFEB chr6 41735351 - COL21A1 chr6 56182657 - Exonic hg38 KIRP TCGA-BQ-7048-01A 1000 1000 Out-of-frame Intra-chr p21.1 Transcription factor p12.1 Seq+ 91221 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAIAP2L1-MET BAIAP2L1 chr7 98310445 - MET chr7 116774881 + Exonic hg38 KIRP TCGA-BQ-7049-01A 46 173 In-Frame Intra-chr q22.1 q31.2 TK:Met Oncogene Seq+ 91222 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRCC-TFE3 PRCC chr1 156768239 + TFE3 chrX 49038442 - Exonic hg38 KIRP TCGA-BQ-7050-01A 41 78 In-Frame Inter-chr q23.1 p11.23 Oncogene Transcription factor KB Pub Seq+ 91223 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRABD2B-BEND5 TRABD2B chr1 47994034 - BEND5 chr1 48728043 - Exonic hg38 KIRP TCGA-BQ-7051-01A 100 391 Out-of-frame Intra-chr p33 p33 91224 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806934 + TACC3 chr4 1739702 + Exonic hg38 KIRP TCGA-DW-7839-01A 2 4 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 91225 ChimerSeq TCGA FAWG TCGA_RNA-Seq RICTOR-MINPP1 RICTOR chr5 38990949 - MINPP1 chr10 87552082 + Exonic hg38 KIRP TCGA-DW-7841-01A 4 8 In-Frame Inter-chr p13.1 q23.2 Seq+ 91226 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM10-TFE3 RBM10 chrX 47182326 + TFE3 chrX 49038114 - Exonic hg38 KIRP TCGA-DZ-6131-01A 2 174 In-Frame Intra-chr p11.3 p11.23 Oncogene Transcription factor KB Pub Seq+ 91227 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLASRP-ZNF524 CLASRP chr19 45053177 + ZNF524 chr19 55602075 + Exonic hg38 KIRP TCGA-F9-A4JJ-01A 6 17 5'UTR-5'UTR Intra-chr q13.32 q13.42 Transcription factor Seq+ 91228 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF106-ADGRF4 ZNF106 chr15 42421061 - ADGRF4 chr6 47721209 + Exonic hg38 KIRP TCGA-F9-A7Q0-01A 53 101 CDS-3'UTR Inter-chr q15.1 p12.3 91229 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D16-ZNF106 TBC1D16 chr17 80035795 - ZNF106 chr15 42424060 - Exonic hg38 KIRP TCGA-F9-A7Q0-01A 4 44 5'UTR-CDS Inter-chr q25.3 q15.1 Seq+ 91230 ChimerSeq TCGA FAWG TCGA_RNA-Seq PFKL-AIRE PFKL chr21 44319828 + AIRE chr21 44288568 + Exonic hg38 KIRP TCGA-F9-A97G-01A 9 29 Out-of-frame Intra-chr q22.3 q22.3 Transcription factor Seq+ 91231 ChimerSeq TCGA FAWG TCGA_RNA-Seq STRN-ALK STRN chr2 36916078 - ALK chr2 29223528 - Exonic hg38 KIRP TCGA-G7-6792-01A 32 81 In-Frame Intra-chr p22.2 p23.1 TK:ALK Oncogene KB Pub Seq+ 91232 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIDINS220-MYT1L KIDINS220 chr2 8837480 - MYT1L chr2 2284503 - Exonic hg38 KIRP TCGA-G7-6792-01A 12 73 5'UTR-5'UTR Intra-chr p25.1 p25.3 Transcription factor Seq+ 91233 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM3A-CRIM1 KDM3A chr2 86464216 + CRIM1 chr2 36464534 + Exonic hg38 KIRP TCGA-G7-6792-01A 12 53 In-Frame Intra-chr p11.2 Tumor suppressor gene p22.2 Seq+ 91234 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRIM1-HAAO CRIM1 chr2 36499347 + HAAO chr2 42770582 - Exonic hg38 KIRP TCGA-G7-6792-01A 9 31 Out-of-frame Intra-chr p22.2 p21 Seq+ 91235 ChimerSeq TCGA FAWG TCGA_RNA-Seq SELENOI-MIR3681HG SELENOI chr2 26346289 + MIR3681HG chr2 12131306 + Exonic hg38 KIRP TCGA-G7-6792-01A 3 26 5'UTR-5'UTR Intra-chr p23.3 p25.1 91236 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK2-NCOA1 ROCK2 chr2 11343996 - NCOA1 chr2 24643966 + Exonic hg38 KIRP TCGA-G7-6792-01A 3 16 CDS-5'UTR Intra-chr p25.1 AGC:DMPK p23.3 Oncogene Transcription factor Seq+ 91237 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA1-LPIN1 NCOA1 chr2 24584560 + LPIN1 chr2 11741349 + Exonic hg38 KIRP TCGA-G7-6792-01A 1 17 5'UTR-5'UTR Intra-chr p23.3 Oncogene Transcription factor p25.1 Seq+ 91238 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPY30-IMMT DPY30 chr2 31883386 - IMMT chr2 86162079 - Exonic hg38 KIRP TCGA-G7-6792-01A 1 13 3'UTR-CDS Intra-chr p22.3 p11.2 Seq+ 91239 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF3C-SNTG2 KIF3C chr2 25980373 - SNTG2 chr2 1083518 + Exonic hg38 KIRP TCGA-G7-6792-01A 4 1 CDS-3'UTR Intra-chr p23.3 91240 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEMO1-IMMT MEMO1 chr2 31883386 - IMMT chr2 86162079 - Exonic hg38 KIRP TCGA-G7-6792-01A 1 13 In-Frame Intra-chr p22.3 p11.2 Seq+ 91241 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4K3-SMC6 MAP4K3 chr2 39436892 - SMC6 chr2 17745951 - Exonic hg38 KIRP TCGA-G7-6792-01A 1 8 CDS-5'UTR Intra-chr p22.1 p24.2 Seq+ 91242 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSSC1-SLC5A6 TSSC1 chr2 3338017 - SLC5A6 chr2 27211533 - Exonic hg38 KIRP TCGA-G7-6792-01A 1 4 Out-of-frame Intra-chr p25.3 p23.3 Seq+ 91243 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNMT3A-GTF3C2 DNMT3A chr2 25235707 - GTF3C2 chr2 27343578 - Exonic hg38 KIRP TCGA-G7-6792-01A 1 3 Out-of-frame Intra-chr p23.3 Oncogene Tumor suppressor gene p23.3 Seq+ 91244 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYT1L-POMC MYT1L chr2 2053978 - POMC chr2 25164792 - Exonic hg38 KIRP TCGA-G7-6792-01A 1000 1000 5'UTR-5'UTR Intra-chr p25.3 Transcription factor p23.3 Seq+ 91245 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNDC3B-BCHE FNDC3B chr3 172133546 + BCHE chr3 165786311 - Exonic hg38 KIRP TCGA-G7-6793-01A 91 307 Out-of-frame Intra-chr q26.31 q26.1 Seq+ 91246 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3CB-HHLA2 PIK3CB chr3 138759173 - HHLA2 chr3 108351788 + Exonic hg38 KIRP TCGA-G7-6793-01A 25 139 Out-of-frame Intra-chr q22.3 Oncogene q13.13 Seq+ 91247 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPN1-MAP6D1 RPN1 chr3 128644919 - MAP6D1 chr3 183818111 - Exonic hg38 KIRP TCGA-G7-6793-01A 18 119 In-Frame Intra-chr q21.3 q27.1 Seq+ 91248 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL24-ATP11B KLHL24 chr3 183672484 + ATP11B chr3 182913861 + Exonic hg38 KIRP TCGA-G7-6793-01A 23 82 In-Frame Intra-chr q27.1 q26.33 Oncogene Seq+ 91249 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA5B-PLS1 SEMA5B chr3 122948506 - PLS1 chr3 142703868 + Exonic hg38 KIRP TCGA-G7-6793-01A 19 56 Out-of-frame Intra-chr q21.1 q23 Seq+ 91250 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3CB-SEMA5B PIK3CB chr3 138733361 - SEMA5B chr3 122948709 - Exonic hg38 KIRP TCGA-G7-6793-01A 10 45 Out-of-frame Intra-chr q22.3 Oncogene q21.1 Seq+ 91251 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB7A-PARP15 RAB7A chr3 128726359 + PARP15 chr3 122605936 + Exonic hg38 KIRP TCGA-G7-6793-01A 11 4 5'UTR-CDS Intra-chr q21.3 Tumor suppressor gene q21.1 Seq+ 91252 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF213-SLC26A11 RNF213 chr17 80358479 + SLC26A11 chr17 80248130 + Exonic hg38 KIRP TCGA-G7-6793-01A 3 25 Out-of-frame Intra-chr q25.3 Oncogene q25.3 Pub Seq+ 91253 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM117-MCCC1 TMEM117 chr12 44299739 + MCCC1 chr3 183022554 - Exonic hg38 KIRP TCGA-G7-6793-01A 2 22 In-Frame Inter-chr q12 q27.1 Seq+ 91254 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLS1-PIK3CB PLS1 chr3 142596509 + PIK3CB chr3 138737886 - Exonic hg38 KIRP TCGA-G7-6793-01A 3 16 5'UTR-CDS Intra-chr q23 q22.3 Oncogene Seq+ 91255 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNA-SLC43A2 PITPNA chr17 1538869 - SLC43A2 chr17 1616769 - Exonic hg38 KIRP TCGA-G7-6793-01A 4 11 CDS-5'UTR Intra-chr p13.3 Seq+ 91256 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMAN2-DBN1 LMAN2 chr5 177351173 - DBN1 chr5 177460703 - Exonic hg38 KIRP TCGA-G7-6793-01A 1 22 In-Frame Intra-chr q35.3 q35.3 Seq+ 91257 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDV3-KLHL24 CDV3 chr3 133575115 + KLHL24 chr3 183672296 + Exonic hg38 KIRP TCGA-G7-6793-01A 3 13 Out-of-frame Intra-chr q22.1 q27.1 Seq+ 91258 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDIA5-NLGN1 PDIA5 chr3 123102796 + NLGN1 chr3 173604279 + Exonic hg38 KIRP TCGA-G7-6793-01A 1 12 5'UTR-5'UTR Intra-chr q21.1 q26.31 91259 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL33-SLC4A1AP MRPL33 chr2 27772692 + SLC4A1AP chr2 27675532 + Exonic hg38 KIRP TCGA-G7-6793-01A 1 9 Out-of-frame Intra-chr p23.2 p23.3 91260 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPRA1-LPP TPRA1 chr3 127579740 - LPP chr3 188866200 + Exonic hg38 KIRP TCGA-G7-6793-01A 1 9 In-Frame Intra-chr q21.3 q27.3 Oncogene Seq+ 91261 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHLDB2-RAB7A PHLDB2 chr3 111939630 + RAB7A chr3 128795360 + Exonic hg38 KIRP TCGA-G7-6793-01A 1 8 CDS-5'UTR Intra-chr q13.2 q21.3 Tumor suppressor gene 91262 ChimerSeq TCGA FAWG TCGA_RNA-Seq YEATS2-PRKCI YEATS2 chr3 183697993 + PRKCI chr3 170235230 + Exonic hg38 KIRP TCGA-G7-6793-01A 2 3 5'UTR-CDS Intra-chr q27.1 q26.2 91263 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFPQ-TFE3 SFPQ chr1 35189003 - TFE3 chrX 49040568 - Exonic hg38 KIRP TCGA-G7-7501-01A 73 320 In-Frame Inter-chr p34.3 p11.23 Oncogene Transcription factor KB Pub Seq+ 91264 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN4-TALDO1 TSPAN4 chr11 847300 + TALDO1 chr11 755879 + Exonic hg38 KIRP TCGA-G7-A8LD-01A 61 172 5'UTR-CDS Intra-chr p15.5 p15.5 Seq+ 91265 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTPS1-ASB3 CTPS1 chr1 41008890 + ASB3 chr2 53670690 - Exonic hg38 KIRP TCGA-G7-A8LD-01A 29 111 In-Frame Inter-chr p34.2 p16.2 Seq+ 91266 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRBA-CHCHD3 LRBA chr4 150277853 - CHCHD3 chr7 132796577 - Exonic hg38 KIRP TCGA-G7-A8LD-01A 37 61 In-Frame Inter-chr q31.3 q33 Transcription factor Seq+ 91267 ChimerSeq TCGA FAWG TCGA_RNA-Seq OAZ2-SPAST OAZ2 chr15 64703029 - SPAST chr2 32141904 + Exonic hg38 KIRP TCGA-G7-A8LD-01A 14 36 In-Frame Inter-chr q22.31 p22.3 Seq+ 91268 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASB3-CTPS1 ASB3 chr2 53693884 - CTPS1 chr1 41007449 + Exonic hg38 KIRP TCGA-G7-A8LD-01A 1 13 Out-of-frame Inter-chr p16.2 p34.2 91269 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF609-KIAA0753 ZNF609 chr15 64681387 + KIAA0753 chr17 6579864 - Exonic hg38 KIRP TCGA-G7-A8LD-01A 1 10 3'UTR-3'UTR Inter-chr q22.31 Transcription factor p13.1 91270 ChimerSeq TCGA FAWG TCGA_RNA-Seq MET-C8orf34 MET chr7 116771989 + C8orf34 chr8 68446329 + Exonic hg38 KIRP TCGA-GL-7773-01A 46 104 In-Frame Inter-chr q31.2 TK:Met Oncogene q13.2 Seq+ 91271 ChimerSeq TCGA FAWG TCGA_RNA-Seq C8orf34-MET C8orf34 chr8 68439646 + MET chr7 116774881 + Exonic hg38 KIRP TCGA-GL-7773-01A 24 93 In-Frame Inter-chr q13.2 q31.2 TK:Met Oncogene Seq+ 91272 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIP4K2B-RPL23 PIP4K2B chr17 38777687 - RPL23 chr17 38850475 - Exonic hg38 KIRP TCGA-GL-7966-01A 4 9 5'UTR-CDS Intra-chr q12 q12 Seq+ 91273 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2K-UCHL1 UBE2K chr4 39698390 + UCHL1 chr4 41256593 + Exonic hg38 KIRP TCGA-GL-7966-01A 1 4 5'UTR-5'UTR Intra-chr p14 p13 Tumor suppressor gene 91274 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESYT2-VIPR2 ESYT2 chr7 158788004 - VIPR2 chr7 159058578 - Exonic hg38 KIRP TCGA-GL-8500-01A 75 195 In-Frame Intra-chr q36.3 q36.3 Seq+ 91275 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC47A2-ALDH3A1 SLC47A2 chr17 19712703 - ALDH3A1 chr17 19742212 - Exonic hg38 KIRP TCGA-GL-A4EM-01A 12 44 In-Frame Intra-chr p11.2 p11.2 Seq+ 91276 ChimerSeq TCGA FAWG TCGA_RNA-Seq C14orf2-ACIN1 C14orf2 chr14 103921470 - ACIN1 chr14 23090101 - Exonic hg38 KIRP TCGA-GL-A9DE-01A 2 3 Out-of-frame Intra-chr q32.33 q11.2 91277 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF791-HOOK2 ZNF791 chr19 12611082 + HOOK2 chr19 12763778 - Exonic hg38 KIRP TCGA-HE-7130-01A 11 101 In-Frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 91278 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN21-TTC8 PTPN21 chr14 88550238 - TTC8 chr14 88839452 + Exonic hg38 KIRP TCGA-HE-7130-01A 9 24 In-Frame Intra-chr q31.3 q31.3 Seq+ 91279 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPT1A-TRIM24 CPT1A chr11 68807467 - TRIM24 chr7 138551063 + Exonic hg38 KIRP TCGA-HE-7130-01A 2 31 In-Frame Inter-chr q13.3 q33 Oncogene Tumor suppressor gene Seq+ 91280 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRIPAP1-SYP GRIPAP1 chrX 48978305 - SYP chrX 49189282 - Exonic hg38 KIRP TCGA-HE-7130-01A 4 7 CDS-3'UTR Intra-chr p11.23 p11.23 Seq+ 91281 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGB4-ENDOV ITGB4 chr17 75733692 + ENDOV chr17 80429773 + Exonic hg38 KIRP TCGA-HE-7130-01A 3 10 Out-of-frame Intra-chr q25.1 q25.3 Seq+ 91282 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPRIP-COPS3 MPRIP chr17 17078076 + COPS3 chr17 17247151 - Exonic hg38 KIRP TCGA-HE-A5NK-01A 5 51 In-Frame Intra-chr p11.2 p11.2 Seq+ 91283 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACSM2B-NOTCH2 ACSM2B chr16 20575422 - NOTCH2 chr1 119922778 - Exonic hg38 KIRP TCGA-IA-A40X-01A 4 19 5'UTR-CDS Inter-chr p12.3 p12 Oncogene Tumor suppressor gene Seq+ 91284 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSR-CSMD1 GSR chr8 30684088 - CSMD1 chr8 3029513 - Exonic hg38 KIRP TCGA-J7-8537-01A 26 85 In-Frame Intra-chr p12 p23.2 Tumor suppressor gene Seq+ 91285 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFE3-DVL2 TFE3 chrX 49040455 - DVL2 chr17 7229447 - Exonic hg38 KIRP TCGA-J7-8537-01A 24 71 Out-of-frame Inter-chr p11.23 Oncogene Transcription factor p13.1 Seq+ 91286 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0319L-UBA6 KIAA0319L chr1 35506612 - UBA6 chr4 67668674 - Exonic hg38 KIRP TCGA-J7-8537-01A 18 74 In-Frame Inter-chr p34.3 q13.2 Seq+ 91287 ChimerSeq TCGA FAWG TCGA_RNA-Seq DVL2-TFE3 DVL2 chr17 7229808 - TFE3 chrX 49039410 - Exonic hg38 KIRP TCGA-J7-8537-01A 16 46 In-Frame Inter-chr p13.1 p11.23 Oncogene Transcription factor KB Pub Seq+ 91288 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSDC2-ACO2 CSDC2 chr22 41561183 + ACO2 chr22 41499726 + Exonic hg38 KIRP TCGA-J7-8537-01A 3 19 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 91289 ChimerSeq TCGA FAWG TCGA_RNA-Seq LSM1-NSD3 LSM1 chr8 38176275 - NSD3 chr8 38338607 - Exonic hg38 KIRP TCGA-J7-8537-01A 3 2 Out-of-frame Intra-chr p11.23 p11.23 Tumor suppressor gene 91290 ChimerSeq TCGA FAWG TCGA_RNA-Seq THRAP3-TRAPPC3 THRAP3 chr1 36224505 + TRAPPC3 chr1 36140166 - Exonic hg38 KIRP TCGA-J7-8537-01A 1 5 5'UTR-5'UTR Intra-chr p34.3 p34.3 Seq+ 91291 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR205HG-RPL14 MIR205HG chr1 209432330 + RPL14 chr3 40462064 + Exonic hg38 KIRP TCGA-J7-A8I2-01A 1000 1000 Out-of-frame Inter-chr q32.2 p22.1 91292 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETFA-METTL9 ETFA chr15 76311350 - METTL9 chr16 21612645 + Exonic hg38 KIRP TCGA-MH-A55Z-01A 2 1 CDS-5'UTR Inter-chr q24.3 91293 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF5-NOTCH2 EIF5 chr14 103334597 + NOTCH2 chr1 119922446 - Exonic hg38 KIRP TCGA-MH-A855-01A 4 13 5'UTR-CDS Inter-chr q32.32 p12 Oncogene Tumor suppressor gene Seq+ 91294 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABI1-LRRC37A6P ABI1 chr10 26823138 - LRRC37A6P chr10 27257950 - Exonic hg38 KIRP TCGA-O9-A75Z-01A 2 7 CDS-5'UTR Intra-chr p12.1 p12.1 Seq+ 91295 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPARA-SAMM50 PPARA chr22 46176836 + SAMM50 chr22 43989111 + Exonic hg38 KIRP TCGA-P4-A5EB-01A 39 572 5'UTR-CDS Intra-chr q13.31 Tumor suppressor gene Transcription factor q13.31 Seq+ 91296 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDHA-MIF SDHA chr5 236599 + MIF chr22 23894772 + Exonic hg38 KIRP TCGA-P4-A5EB-01A 39 173 CDS-3'UTR Inter-chr p15.33 Oncogene Tumor suppressor gene q11.23 Tumor suppressor gene Seq+ 91297 ChimerSeq TCGA FAWG TCGA_RNA-Seq PICK1-PDCD6 PICK1 chr22 38074967 + PDCD6 chr5 311293 + Exonic hg38 KIRP TCGA-P4-A5EB-01A 23 66 Out-of-frame Inter-chr q13.1 p15.33 Seq+ 91298 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL2L13-GTPBP1 BCL2L13 chr22 17638886 + GTPBP1 chr22 38730612 + Exonic hg38 KIRP TCGA-P4-A5EB-01A 6 75 Out-of-frame Intra-chr q11.21 q13.1 Seq+ 91299 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL22-RANGAP1 KLHL22 chr22 20446443 - RANGAP1 chr22 41256824 - Exonic hg38 KIRP TCGA-P4-A5EB-01A 9 42 In-Frame Intra-chr q11.21 q13.2 Seq+ 91300 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXNB2-MAST4 PLXNB2 chr22 50283602 - MAST4 chr5 66899951 + Exonic hg38 KIRP TCGA-P4-A5EB-01A 10 30 Out-of-frame Inter-chr q13.33 q12.3 AGC:MAST Seq+ 91301 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1671-NLN KIAA1671 chr22 24952772 + NLN chr5 65809515 + Exonic hg38 KIRP TCGA-P4-A5EB-01A 8 9 5'UTR-CDS Inter-chr q11.23 q12.3 Seq+ 91302 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFR-RAI14 ZFR chr5 32444229 - RAI14 chr5 34795939 + Exonic hg38 KIRP TCGA-P4-A5EB-01A 4 25 In-Frame Intra-chr p13.3 p13.2 Seq+ 91303 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLPTM1L-SCUBE1 CLPTM1L chr5 1322877 - SCUBE1 chr22 43255577 - Exonic hg38 KIRP TCGA-P4-A5EB-01A 3 26 3'UTR-CDS Inter-chr p15.33 q13.2 Seq+ 91304 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADSL-CDH18 ADSL chr22 40361342 + CDH18 chr5 19981178 - Exonic hg38 KIRP TCGA-P4-A5EB-01A 4 18 5'UTR-5'UTR Inter-chr q13.1 p14.3 Seq+ 91305 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARCH6-MTRR 2019_ 3_ 6_ chr5 10394785 + MTRR chr5 7883155 + Exonic hg38 KIRP TCGA-P4-A5EB-01A 2 18 Out-of-frame Intra-chr p15.2 p15.31 Oncogene Seq+ 91306 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC6B-BASP1 TNRC6B chr22 40156182 + BASP1 chr5 17212120 + Exonic hg38 KIRP TCGA-P4-A5EB-01A 1 22 CDS-5'UTR Inter-chr q13.1 p15.1 Tumor suppressor gene Seq+ 91307 ChimerSeq TCGA FAWG TCGA_RNA-Seq GUSBP11-SHANK3 GUSBP11 chr22 23717031 - SHANK3 chr22 50698690 + Exonic hg38 KIRP TCGA-P4-A5EB-01A 3 9 3'UTR-3'UTR Intra-chr q11.23 Seq+ 91308 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF185-EIF4ENIF1 RNF185 chr22 31160303 + EIF4ENIF1 chr22 31471917 - Exonic hg38 KIRP TCGA-P4-A5EB-01A 2 13 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 91309 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE4D-RNF180 PDE4D chr5 59768247 - RNF180 chr5 64369615 + Exonic hg38 KIRP TCGA-P4-A5EB-01A 2 12 Out-of-frame Intra-chr q12.1 q12.3 Tumor suppressor gene Seq+ 91310 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA2-MYO18B ITGA2 chr5 53058101 + MYO18B chr22 25992363 + Exonic hg38 KIRP TCGA-P4-A5EB-01A 2 9 In-Frame Inter-chr q11.2 q12.1 Tumor suppressor gene Seq+ 91311 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFCAB6-OSBP2 EFCAB6 chr22 43782180 - OSBP2 chr22 30694208 + Exonic hg38 KIRP TCGA-P4-A5EB-01A 1 11 Out-of-frame Intra-chr q13.31 q12.2 Seq+ 91312 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK12-SSTR3 MAPK12 chr22 50255197 - SSTR3 chr22 37207839 - Exonic hg38 KIRP TCGA-P4-A5EB-01A 1 10 CDS-5'UTR Intra-chr q13.33 q13.1 Seq+ 91313 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC28-KIAA1671 TTC28 chr22 28679622 - KIAA1671 chr22 25190702 + Exonic hg38 KIRP TCGA-P4-A5EB-01A 1 3 Out-of-frame Intra-chr q12.1 q11.23 91314 ChimerSeq TCGA FAWG TCGA_RNA-Seq IPO11-SLC6A19 IPO11 chr5 62476753 + SLC6A19 chr5 1218903 + Exonic hg38 KIRP TCGA-P4-A5EB-01A 1 2 In-Frame Intra-chr q12.1 p15.33 91315 ChimerSeq TCGA FAWG TCGA_RNA-Seq LTBR-PRSS3 LTBR chr12 6386444 + PRSS3 chr9 33796643 + Exonic hg38 KIRP TCGA-P4-AAVM-01A 73 301 In-Frame Inter-chr p13.31 p13.3 Seq+ 91316 ChimerSeq TCGA FAWG TCGA_RNA-Seq CALU-LAP3 CALU chr7 128767655 + LAP3 chr4 17598456 + Exonic hg38 KIRP TCGA-PJ-A5Z8-01A 2 1 In-Frame Inter-chr q32.1 p15.32 91317 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPP4-PDK1 DPP4 chr2 162045532 - PDK1 chr2 172586278 + Exonic hg38 KIRP TCGA-Q2-A5QZ-01A 25 93 In-Frame Intra-chr q24.2 Tumor suppressor gene q31.1 AGC:PDK1 Seq+ 91318 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLTSCR1L-PMS1 GLTSCR1L chr6 42782101 + PMS1 chr2 189863743 + Exonic hg38 KIRP TCGA-Q2-A5QZ-01A 5 18 Out-of-frame Inter-chr q32.2 Oncogene Seq+ 91319 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A12-ERICH2 SLC25A12 chr2 171991347 - ERICH2 chr2 170798041 + Exonic hg38 KIRP TCGA-Q2-A5QZ-01A 5 13 5'UTR-CDS Intra-chr q31.1 q31.1 Seq+ 91320 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFAT5-CSMD2 NFAT5 chr16 69566374 + CSMD2 chr1 33550350 - Exonic hg38 KIRP TCGA-SX-A71S-01A 19 71 In-Frame Inter-chr q22.1 Transcription factor p35.1 Seq+ 91321 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFPQ-TFE3 SFPQ chr1 35189003 - TFE3 chrX 49040568 - Exonic hg38 KIRP TCGA-SX-A7SO-01A 47 171 In-Frame Inter-chr p34.3 p11.23 Oncogene Transcription factor KB Pub Seq+ 91322 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM134B-TERT FAM134B chr5 16508578 - TERT chr5 1282624 - Exonic hg38 KIRP TCGA-UZ-A9PN-01A 6 53 Out-of-frame Intra-chr p15.33 Oncogene Seq+ 91323 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF318-COL21A1 ZNF318 chr6 43348324 - COL21A1 chr6 56126149 - Exonic hg38 KIRP TCGA-UZ-A9PQ-01A 9 50 In-Frame Intra-chr p21.1 Transcription factor p12.1 Seq+ 91324 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELOVL5-PFKFB3 ELOVL5 chr6 53348817 - PFKFB3 chr10 6213623 + Exonic hg38 KIRP TCGA-UZ-A9PQ-01A 4 27 5'UTR-5'UTR Inter-chr p12.1 p15.1 Seq+ 91325 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAPK1-WSCD1 DAPK1 chr9 87658127 + WSCD1 chr17 5888757 + Exonic hg38 KIRP TCGA-UZ-A9PQ-01A 9 4 CDS-5'UTR Inter-chr q21.33 CAMK:DAPK Tumor suppressor gene p13.2 Seq+ 91326 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD2AP-TRERF1 CD2AP chr6 47554766 + TRERF1 chr6 42300749 - Exonic hg38 KIRP TCGA-UZ-A9PQ-01A 2 11 CDS-5'UTR Intra-chr p12.3 p21.1 Transcription factor Seq+ 91327 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLH-PKHD1 POLH chr6 43601091 + PKHD1 chr6 51791373 - Exonic hg38 KIRP TCGA-UZ-A9PQ-01A 2 10 Out-of-frame Intra-chr p21.1 p12.2 Oncogene Seq+ 91328 ChimerSeq TCGA FAWG TCGA_RNA-Seq WSCD1-DAPK1 WSCD1 chr17 5888830 + DAPK1 chr9 87668597 + Exonic hg38 KIRP TCGA-UZ-A9PQ-01A 2 2 5'UTR-CDS Inter-chr p13.2 q21.33 CAMK:DAPK Tumor suppressor gene 91329 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPP38-GPR158 RPP38 chr10 15111786 + GPR158 chr10 25221052 + Exonic hg38 KIRP TCGA-UZ-A9PQ-01A 1 3 3'UTR-CDS Intra-chr p13 p12.1 91330 ChimerSeq TCGA FAWG TCGA_RNA-Seq APP-ITM2B APP chr21 25975070 - ITM2B chr13 48253808 + Exonic hg38 KIRP TCGA-UZ-A9PR-01A 1 3 In-Frame Inter-chr q21.3 q14.2 91331 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNMT3B-MMP9 DNMT3B chr20 32762699 + MMP9 chr20 46009866 + Exonic hg38 KIRP TCGA-Y8-A8S1-01A 3 9 5'UTR-CDS Intra-chr q11.21 Tumor suppressor gene q13.12 Seq+ 91332 ChimerSeq TCGA FAWG TCGA_RNA-Seq PML-RARA PML chr15 74033414 + RARA chr17 40348316 + Exonic hg38 LAML TCGA-AB-2803-03A 2 22 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 91333 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL32-1084A12.1 RPL32 chr3 12836198 - 1084A12.1 chr15 34086184 - Exonic hg38 LAML TCGA-AB-2803-03A 1 12 Out-of-frame Inter-chr p25.2 91334 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYRK1A-TTC3 DYRK1A chr21 37420384 + TTC3 chr21 37108392 + Exonic hg38 LAML TCGA-AB-2807-03A 1 0 Out-of-frame Intra-chr q22.13 CMGC:DYRK q22.13 Seq+ 91335 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67082339 + MYH11 chr16 15721051 - Exonic hg38 LAML TCGA-AB-2815-03A 19 23 CDS-5'UTR Intra-chr q22.1 Oncogene KB Pub Seq+ 91336 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCR-ABL1 BCR chr22 23182239 + ABL1 chr9 130854064 + Exonic hg38 LAML TCGA-AB-2817-03A 14 56 In-Frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q34.12 TK:Abl Oncogene KB Pub Seq+ 91337 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMKK2-KDM2B CAMKK2 chr12 121245140 - KDM2B chr12 121453344 - Exonic hg38 LAML TCGA-AB-2817-03A 1 0 Out-of-frame Intra-chr q24.31 q24.31 Transcription factor Seq+ 91338 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIMS1-LIMS4 LIMS1 chr2 108684114 + LIMS4 chr2 110451887 - Exonic hg38 LAML TCGA-AB-2818-03A 1 13 Out-of-frame Intra-chr q12.3 q13 91339 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUNX1-RUNX1T1 RUNX1 chr21 34859474 - RUNX1T1 chr8 92017363 - Exonic hg38 LAML TCGA-AB-2819-03A 1 159 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q21.3 Oncogene KB Pub Seq+ 91340 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR1244-PTMAP5 MIR1244 chr5 118974651 + PTMAP5 chr13 81690786 + Exonic hg38 LAML TCGA-AB-2819-03A 1 10 Out-of-frame Inter-chr q31.1 91341 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOSR1-ZNF207 GOSR1 chr17 30484770 + ZNF207 chr17 32369295 + Exonic hg38 LAML TCGA-AB-2820-03A 1 18 In-Frame Intra-chr q11.2 q11.2 Transcription factor Seq+ 91342 ChimerSeq TCGA FAWG TCGA_RNA-Seq PML-RARA PML chr15 74023408 + RARA chr17 40348316 + Exonic hg38 LAML TCGA-AB-2823-03A 9 41 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 91343 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB2A-CLVS1 RAB2A chr8 60517253 + CLVS1 chr8 61131770 + Exonic hg38 LAML TCGA-AB-2823-03A 5 6 CDS-5'UTR Intra-chr q12.1 q12.2 Seq+ 91344 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3CB-PCCB PIK3CB chr3 138834695 - PCCB chr3 136260479 + Exonic hg38 LAML TCGA-AB-2823-03A 1 0 5'UTR-CDS Intra-chr q22.3 Oncogene q22.3 Seq+ 91345 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67082339 + MYH11 chr16 15727054 - Exonic hg38 LAML TCGA-AB-2828-03A 1 52 CDS-5'UTR Intra-chr q22.1 Oncogene KB Pub Seq+ 91346 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOD2-327F22.4 NOD2 chr16 50712401 + 327F22.4 chr16 50784189 - Exonic hg38 LAML TCGA-AB-2828-03A 2 20 Out-of-frame Intra-chr q12.1 91347 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABR-YWHAE ABR chr17 1228793 - YWHAE chr17 1365058 - Exonic hg38 LAML TCGA-AB-2832-03A 1 0 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 91348 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2A-MLLT10 KMT2A chr11 118225744 + MLLT10 chr10 22248307 + Exonic hg38 LAML TCGA-AB-2832-03A 7 6 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor p12.31 Oncogene KB Pub 91349 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIK3-C11orf1 SIK3 chr11 118225744 - C11orf1 chr10 22248307 + Exonic hg38 LAML TCGA-AB-2832-03A 6 7 Out-of-frame Inter-chr q23.3 q23.1 Seq+ 91350 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2A-ELL KMT2A chr11 118473834 + ELL chr19 18450570 - Exonic hg38 LAML TCGA-AB-2834-03A 1 21 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor p13.11 KB Pub Seq+ 91351 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC37A4P-LRRC37A3 LRRC37A4P chr17 45508054 - LRRC37A3 chr17 64854471 - Exonic hg38 LAML TCGA-AB-2839-03A 1 17 Out-of-frame Intra-chr q24.1 91352 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK12-FBXL20 CDK12 chr17 39471763 + FBXL20 chr17 39343241 - Exonic hg38 LAML TCGA-AB-2839-03A 1 0 Out-of-frame Intra-chr q12 Oncogene q12 Seq+ 91353 ChimerSeq TCGA FAWG TCGA_RNA-Seq PML-RARA PML chr15 74023408 + RARA chr17 40348316 + Exonic hg38 LAML TCGA-AB-2840-03A 5 27 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 91354 ChimerSeq TCGA FAWG TCGA_RNA-Seq PML-RARA PML chr15 74024927 + RARA chr17 40348316 + Exonic hg38 LAML TCGA-AB-2841-03B 1 27 Out-of-frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 91355 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2A-MLLT10 KMT2A chr11 118223925 + MLLT10 chr10 22164152 + Exonic hg38 LAML TCGA-AB-2842-03A 15 4 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor p12.31 Oncogene KB Pub 91356 ChimerSeq TCGA FAWG TCGA_RNA-Seq LYZ-IRAK1 LYZ chr12 69348514 + IRAK1 chrX 154010742 - Exonic hg38 LAML TCGA-AB-2844-03A 1 0 Out-of-frame Inter-chr q15 q28 TKL:IRAK 91357 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2A-ELL KMT2A chr11 118223925 + ELL chr19 18687538 - Exonic hg38 LAML TCGA-AB-2844-03A 13 25 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor p13.11 KB Pub Seq+ 91358 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67029439 + MYH11 chr16 15717156 - Exonic hg38 LAML TCGA-AB-2846-03A 1 36 Out-of-frame Intra-chr q22.1 Oncogene KB Pub Seq+ 91359 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSH3-KDM2A SSH3 chr11 67306988 + KDM2A chr11 67255288 + Exonic hg38 LAML TCGA-AB-2847-03A 1 0 Out-of-frame Intra-chr q13.2 q13.2 Transcription factor Seq+ 91360 ChimerSeq TCGA FAWG TCGA_RNA-Seq PICALM-MLLT10 PICALM chr11 85981129 - MLLT10 chr10 21651673 + Exonic hg38 LAML TCGA-AB-2849-03A 2 30 In-Frame Inter-chr q14.2 p12.31 Oncogene KB Pub Seq+ 91361 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSK3B-TIAM1 GSK3B chr3 120002194 - TIAM1 chr21 31225844 - Exonic hg38 LAML TCGA-AB-2849-03A 1 0 Out-of-frame Inter-chr q13.33 CMGC:GSK Tumor suppressor gene q22.11 91362 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAN3-FLT3 PAN3 chr13 28220378 + FLT3 chr13 28070612 - Exonic hg38 LAML TCGA-AB-2853-03A 1 0 In-Frame Intra-chr q12.2 q12.2 TK:PDGFR Oncogene Tumor suppressor gene Seq+ 91363 ChimerSeq TCGA FAWG TCGA_RNA-Seq PICALM-MLLT10 PICALM chr11 85974708 - MLLT10 chr10 21661023 + Exonic hg38 LAML TCGA-AB-2855-03A 2 46 CDS-5'UTR Inter-chr q14.2 p12.31 Oncogene KB Pub Seq+ 91364 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP98-NSD1 NUP98 chr11 3744509 - NSD1 chr5 177235821 + Exonic hg38 LAML TCGA-AB-2856-03A 1 5 In-Frame Inter-chr p15.4 Oncogene Tumor suppressor gene q35.3 Oncogene KB Pub Seq+ 91365 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRMT1-TLE6 PRMT1 chr19 49677316 + TLE6 chr19 2980100 + Exonic hg38 LAML TCGA-AB-2857-03A 1 15 In-Frame Intra-chr q13.33 p13.3 Seq+ 91366 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR18-H2AFX WDR18 chr19 985975 + H2AFX chr11 118964971 - Exonic hg38 LAML TCGA-AB-2857-03A 4 13 CDS-3'UTR Inter-chr p13.3 q23.3 Tumor suppressor gene Seq+ 91367 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUNX1-RUNX1T1 RUNX1 chr21 34888217 - RUNX1T1 chr8 92005225 - Exonic hg38 LAML TCGA-AB-2858-03A 1 292 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q21.3 Oncogene KB Pub Seq+ 91368 ChimerSeq TCGA FAWG TCGA_RNA-Seq NBPF25P-NBPF1 NBPF25P chr1 145586091 - NBPF1 chr1 16574577 - Exonic hg38 LAML TCGA-AB-2859-03A 1 13 3'UTR-CDS Intra-chr q21.1 p36.13 91369 ChimerSeq TCGA FAWG TCGA_RNA-Seq PML-RARA PML chr15 74033414 + RARA chr17 40348316 + Exonic hg38 LAML TCGA-AB-2862-03A 6 82 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 91370 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAPVD1-PTGR1 GAPVD1 chr9 125261959 + PTGR1 chr9 111549799 - Exonic hg38 LAML TCGA-AB-2868-03A 3 9 5'UTR-CDS Intra-chr q33.3 q31.3 Seq+ 91371 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRN3P2-BANP RRN3P2 chr16 29096155 + BANP chr16 87981075 + Exonic hg38 LAML TCGA-AB-2868-03A 1 10 Out-of-frame Intra-chr p11.2 q24.2 Tumor suppressor gene 91372 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTSS-HP1BP3 CTSS chr1 150751560 - HP1BP3 chr1 20743407 - Exonic hg38 LAML TCGA-AB-2868-03A 1 0 Out-of-frame Intra-chr q21.3 p36.12 91373 ChimerSeq TCGA FAWG TCGA_RNA-Seq PML-RARA PML chr15 74033414 + RARA chr17 40348316 + Exonic hg38 LAML TCGA-AB-2872-03A 3 25 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 91374 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS5-MPO RPS5 chr19 58394551 + MPO chr17 58270002 - Exonic hg38 LAML TCGA-AB-2874-03A 1 7 Out-of-frame Inter-chr q13.43 q22 91375 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS8-MPO RPS8 chr1 44775909 + MPO chr17 58280911 - Exonic hg38 LAML TCGA-AB-2874-03A 1 4 Out-of-frame Inter-chr p34.1 q22 91376 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUNX1-RUNX1T1 RUNX1 chr21 34859474 - RUNX1T1 chr8 92017363 - Exonic hg38 LAML TCGA-AB-2875-03A 1 341 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q21.3 Oncogene KB Pub Seq+ 91377 ChimerSeq TCGA FAWG TCGA_RNA-Seq LYZ-SMG1 LYZ chr12 69353485 + SMG1 chr16 18807805 - Exonic hg38 LAML TCGA-AB-2875-03A 1 1 Out-of-frame Inter-chr q15 p12.3 Atypical:PIKK 91378 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK10-SNX2 STK10 chr5 172082325 - SNX2 chr5 122817348 + Exonic hg38 LAML TCGA-AB-2875-03A 1 0 Out-of-frame Intra-chr q35.1 Tumor suppressor gene q23.2 Seq+ 91379 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL13-MPO RPL13 chr16 89563433 + MPO chr17 58270004 - Exonic hg38 LAML TCGA-AB-2879-03A 1 0 Out-of-frame Inter-chr q24.3 q22 91380 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANAPC2-CEBPA ANAPC2 chr9 137180506 - CEBPA chr19 33301511 - Exonic hg38 LAML TCGA-AB-2880-03A 23 0 Out-of-frame Inter-chr q34.3 q13.11 Oncogene Tumor suppressor gene Transcription factor 91381 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67082339 + MYH11 chr16 15721051 - Exonic hg38 LAML TCGA-AB-2881-03A 20 17 CDS-5'UTR Intra-chr q22.1 Oncogene KB Pub Seq+ 91382 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHMP6-RPTOR CHMP6 chr17 80999394 + RPTOR chr17 80857789 + Exonic hg38 LAML TCGA-AB-2882-03A 1 0 Out-of-frame Intra-chr q25.3 q25.3 91383 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABR-YWHAE ABR chr17 1228793 - YWHAE chr17 1365058 - Exonic hg38 LAML TCGA-AB-2884-03A 1 0 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 91384 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUNX1-RUNX1T1 RUNX1 chr21 34859474 - RUNX1T1 chr8 92017363 - Exonic hg38 LAML TCGA-AB-2886-03A 4 482 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q21.3 Oncogene KB Pub Seq+ 91385 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSTYK-NUCKS1 DSTYK chr1 205211271 - NUCKS1 chr1 205729621 - Exonic hg38 LAML TCGA-AB-2888-03B 1 0 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 91386 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67082339 + MYH11 chr16 15721051 - Exonic hg38 LAML TCGA-AB-2888-03B 8 9 CDS-5'UTR Intra-chr q22.1 Oncogene KB Pub Seq+ 91387 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67036652 + MYH11 chr16 15720975 - Exonic hg38 LAML TCGA-AB-2889-03A 1 69 Out-of-frame Intra-chr q22.1 Oncogene KB Pub Seq+ 91388 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEF1A1-MPO EEF1A1 chr6 73519921 - MPO chr17 58269880 - Exonic hg38 LAML TCGA-AB-2889-03A 1 7 Out-of-frame Inter-chr q13 Tumor suppressor gene q22 91389 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST8SIA2-IGKJ3 ST8SIA2 chr15 92464725 + IGKJ3 chr2 88861255 - Exonic hg38 LAML TCGA-AB-2891-03A 9 0 Out-of-frame Inter-chr q26.1 p11.2 91390 ChimerSeq TCGA FAWG TCGA_RNA-Seq COX6B1-COX6B1P4 COX6B1 chr19 35651258 + COX6B1P4 chr8 26836217 - Exonic hg38 LAML TCGA-AB-2896-03B 1 8 Out-of-frame Inter-chr q13.12 p21.2 91391 ChimerSeq TCGA FAWG TCGA_RNA-Seq PML-RARA PML chr15 74033414 + RARA chr17 40348316 + Exonic hg38 LAML TCGA-AB-2897-03A 3 37 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 91392 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKNK2-RNF126 MKNK2 chr19 2041840 - RNF126 chr19 652884 - Exonic hg38 LAML TCGA-AB-2897-03A 3 6 In-Frame Intra-chr p13.3 p13.3 Seq+ 91393 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCR-ABL1 BCR chr22 23290413 + ABL1 chr9 130854064 + Exonic hg38 LAML TCGA-AB-2901-03A 3 43 In-Frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q34.12 TK:Abl Oncogene KB Pub Seq+ 91394 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNMT3B-MDM4 DNMT3B chr20 32802470 + MDM4 chr1 204525484 + Exonic hg38 LAML TCGA-AB-2904-03A 1 17 CDS-5'UTR Inter-chr q11.21 Tumor suppressor gene q32.1 Oncogene Seq+ 91395 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRSS2-PRSS1 PRSS2 chr7 142772167 + PRSS1 chr7 142751797 + Exonic hg38 LAML TCGA-AB-2908-03A 1 13 Out-of-frame Intra-chr 91396 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT6A-CREBBP KAT6A chr8 41937256 - CREBBP chr16 3851009 - Exonic hg38 LAML TCGA-AB-2910-03A 2 12 In-Frame Inter-chr p11.21 Oncogene p13.3 Oncogene Tumor suppressor gene KB Pub Seq+ 91397 ChimerSeq TCGA FAWG TCGA_RNA-Seq LILRB3-LILRB4 LILRB3 chr19 54218382 - LILRB4 chr19 54666465 + Exonic hg38 LAML TCGA-AB-2911-03A 2 13 Out-of-frame Intra-chr 91398 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2A-ELL KMT2A chr11 118484975 + ELL chr19 18458329 - Exonic hg38 LAML TCGA-AB-2911-03A 1 11 In-Frame Inter-chr q23.3 Oncogene Transcription factor p13.11 KB Pub Seq+ 91399 ChimerSeq TCGA FAWG TCGA_RNA-Seq LYZ-SMG1 LYZ chr12 69353479 + SMG1 chr16 18807811 - Exonic hg38 LAML TCGA-AB-2911-03A 1 1 Out-of-frame Inter-chr q15 p12.3 Atypical:PIKK 91400 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67082339 + MYH11 chr16 15721051 - Exonic hg38 LAML TCGA-AB-2914-03A 2 41 CDS-5'UTR Intra-chr q22.1 Oncogene KB Pub Seq+ 91401 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUNX1-MECOM RUNX1 chr21 34834410 - MECOM chr3 169381524 - Exonic hg38 LAML TCGA-AB-2915-03A 1 67 In-Frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q26.2 Transcription factor KB Pub Seq+ 91402 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPM1-GRID1 DPM1 chr20 50955186 - GRID1 chr10 85916239 - Exonic hg38 LAML TCGA-AB-2915-03A 2 16 In-Frame Inter-chr q13.13 q23.2 Seq+ 91403 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK1-SSU72 MAPK1 chr22 21760843 - SSU72 chr1 1562576 - Exonic hg38 LAML TCGA-AB-2915-03A 1 0 Out-of-frame Inter-chr q11.22 Oncogene p36.33 Seq+ 91404 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNK1-RAD52 WNK1 chr12 896455 + RAD52 chr12 916675 - Exonic hg38 LAML TCGA-AB-2915-03A 1 0 Out-of-frame Intra-chr p13.33 p13.33 Seq+ 91405 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP98-NSD1 NUP98 chr11 3744509 - NSD1 chr5 177235821 + Exonic hg38 LAML TCGA-AB-2918-03A 1 13 In-Frame Inter-chr p15.4 Oncogene Tumor suppressor gene q35.3 Oncogene KB Pub Seq+ 91406 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK8-GTF2F2 CDK8 chr13 26254769 + GTF2F2 chr13 45207424 + Exonic hg38 LAML TCGA-AB-2918-03A 1 0 Out-of-frame Intra-chr q12.13 CMGC:CDK Oncogene q14.12 Seq+ 91407 ChimerSeq TCGA FAWG TCGA_RNA-Seq KPNB1-ACE3P KPNB1 chr17 47658660 + ACE3P chr17 63507056 + Exonic hg38 LAML TCGA-AB-2920-03B 10 12 Out-of-frame Intra-chr q21.32 q23.3 Seq+ 91408 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHST11-ATP1B4 CHST11 chr12 104601991 + ATP1B4 chrX 120366525 + Exonic hg38 LAML TCGA-AB-2920-03B 4 20 In-Frame Inter-chr q23.3 q24 Seq+ 91409 ChimerSeq TCGA FAWG TCGA_RNA-Seq WSB1-NBR1 WSB1 chr17 27294435 + NBR1 chr17 43175791 + Exonic hg38 LAML TCGA-AB-2920-03B 4 6 5'UTR-5'UTR Intra-chr q11.1 q21.31 Seq+ 91410 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABR-YWHAE ABR chr17 1228793 - YWHAE chr17 1365058 - Exonic hg38 LAML TCGA-AB-2920-03B 1 0 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 91411 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806071 + TACC3 chr4 1728244 + Exonic hg38 LAML TCGA-AB-2920-03B 1 0 Out-of-frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 91412 ChimerSeq TCGA FAWG TCGA_RNA-Seq KSR1-TENM1 KSR1 chr12 25877734 + TENM1 chrX 123695667 - Exonic hg38 LAML TCGA-AB-2920-03B 4 7 Out-of-frame Inter-chr q11.2 TKL:RAF q25 91413 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRPK2-SRPK2P SRPK2 chr7 105117393 - SRPK2P chr8 62863300 - Exonic hg38 LAML TCGA-AB-2921-03A 1 10 Out-of-frame Inter-chr q22.3 CMGC:SRPK q12.3 91414 ChimerSeq TCGA FAWG TCGA_RNA-Seq GGA2-PRKCB GGA2 chr16 23467213 - PRKCB chr16 24219622 + Exonic hg38 LAML TCGA-AB-2929-03A 1 0 Out-of-frame Intra-chr p12.2 p12.2 Tumor suppressor gene Seq+ 91415 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP98-NSD1 NUP98 chr11 3753316 - NSD1 chr5 177235821 + Exonic hg38 LAML TCGA-AB-2930-03A 2 6 In-Frame Inter-chr p15.4 Oncogene Tumor suppressor gene q35.3 Oncogene KB Pub Seq+ 91416 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC29A3-UNC5B SLC29A3 chr10 71351650 + UNC5B chr10 71302559 + Exonic hg38 LAML TCGA-AB-2932-03A 1 0 Out-of-frame Intra-chr q22.1 q22.1 Tumor suppressor gene 91417 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUCB1-RUVBL2 NUCB1 chr19 48904454 + RUVBL2 chr19 49009776 + Exonic hg38 LAML TCGA-AB-2935-03A 2 17 In-Frame Intra-chr q13.33 q13.33 Seq+ 91418 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUNX1-RUNX1T1 RUNX1 chr21 34859474 - RUNX1T1 chr8 92017363 - Exonic hg38 LAML TCGA-AB-2937-03A 3 210 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q21.3 Oncogene KB Pub Seq+ 91419 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL37-228P16.1 RPL37 chr5 40830838 - 228P16.1 chr12 48055163 - Exonic hg38 LAML TCGA-AB-2937-03A 1 8 Out-of-frame Inter-chr p13.1 91420 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB7A-TNK1 ZBTB7A chr19 4055119 - TNK1 chr17 7382850 + Exonic hg38 LAML TCGA-AB-2938-03A 1 329 Out-of-frame Inter-chr p13.3 Transcription factor TK:Ack Tumor suppressor gene Seq+ 91421 ChimerSeq TCGA FAWG TCGA_RNA-Seq C20orf203-NOL4L C20orf203 chr20 32632929 - NOL4L chr20 32527913 - Exonic hg38 LAML TCGA-AB-2938-03A 1 22 3'UTR-CDS Intra-chr q11.21 q11.21 91422 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD1-MTOR CHD1 chr5 98863408 - MTOR chr1 11213566 - Exonic hg38 LAML TCGA-AB-2939-03A 10 22 Out-of-frame Inter-chr q21.1 Tumor suppressor gene p36.22 Oncogene Seq+ 91423 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCR-ABL1 BCR chr22 23290413 + ABL1 chr9 130854064 + Exonic hg38 LAML TCGA-AB-2941-03A 4 69 In-Frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q34.12 TK:Abl Oncogene KB Pub Seq+ 91424 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67082305 + MYH11 chr16 15721053 - Exonic hg38 LAML TCGA-AB-2942-03A 1 15 Out-of-frame Intra-chr q22.1 Oncogene KB Pub Seq+ 91425 ChimerSeq TCGA FAWG TCGA_RNA-Seq MECOM-RPN1 MECOM chr3 169663336 - RPN1 chr3 128644983 - Exonic hg38 LAML TCGA-AB-2944-03A 12 26 Out-of-frame Intra-chr q26.2 Transcription factor q21.3 Seq+ 91426 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCR-ABL1 BCR chr22 23182239 + ABL1 chr9 130854064 + Exonic hg38 LAML TCGA-AB-2944-03A 2 5 In-Frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q34.12 TK:Abl Oncogene KB Pub Seq+ 91427 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL10-RPL10P6 RPL10 chrX 154400877 + RPL10P6 chr2 214847401 + Exonic hg38 LAML TCGA-AB-2949-03B 1 82 Out-of-frame Inter-chr q28 Tumor suppressor gene q35 91428 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUNX1-RUNX1T1 RUNX1 chr21 34887012 - RUNX1T1 chr8 92062663 - Exonic hg38 LAML TCGA-AB-2950-03A 1 453 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q21.3 Oncogene KB Pub Seq+ 91429 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-LRRC37B NF1 chr17 31095369 + LRRC37B chr17 32045700 + Exonic hg38 LAML TCGA-AB-2952-03B 1 8 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 91430 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBFB-MYH11 CBFB chr16 67082339 + MYH11 chr16 15721051 - Exonic hg38 LAML TCGA-AB-2954-03A 1 48 CDS-5'UTR Intra-chr q22.1 Oncogene KB Pub Seq+ 91431 ChimerSeq TCGA FAWG TCGA_RNA-Seq LYZ-STK10 LYZ chr12 69353978 + STK10 chr5 172043346 - Exonic hg38 LAML TCGA-AB-2954-03A 1 0 Out-of-frame Inter-chr q15 q35.1 Tumor suppressor gene 91432 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2A-MLLT3 KMT2A chr11 118353210 + MLLT3 chr9 20365742 - Exonic hg38 LAML TCGA-AB-2956-03A 1 52 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor p21.3 KB Pub Seq+ 91433 ChimerSeq TCGA FAWG TCGA_RNA-Seq VTI1B-RDH11 VTI1B chr14 67674375 - RDH11 chr14 67693052 - Exonic hg38 LAML TCGA-AB-2956-03A 3 9 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 91434 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPSAP26-RPSAP53 RPSAP26 chr2 62146840 + RPSAP53 chr13 67266885 - Exonic hg38 LAML TCGA-AB-2964-03A 1 9 Out-of-frame Inter-chr p15 q21.32 91435 ChimerSeq TCGA FAWG TCGA_RNA-Seq FKBP15-RET FKBP15 chr9 113174562 - RET chr10 43112136 + Exonic hg38 LAML TCGA-AB-2971-03A 1 0 Out-of-frame Inter-chr q32 q11.21 TK:Ret Oncogene Seq+ 91436 ChimerSeq TCGA FAWG TCGA_RNA-Seq PML-RARA PML chr15 74023408 + RARA chr17 40348316 + Exonic hg38 LAML TCGA-AB-2980-03A 4 30 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 91437 ChimerSeq TCGA FAWG TCGA_RNA-Seq VTI1A-TCF7L2 VTI1A chr10 112538330 + TCF7L2 chr10 113141184 + Exonic hg38 LAML TCGA-AB-2981-03B 1 0 Out-of-frame Intra-chr q25.2 q25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 91438 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1A-RPS6KA1 ARID1A chr1 26779283 + RPS6KA1 chr1 26546912 + Exonic hg38 LAML TCGA-AB-2981-03B 1 0 Out-of-frame Intra-chr p36.11 Oncogene Tumor suppressor gene Seq+ 91439 ChimerSeq TCGA FAWG TCGA_RNA-Seq PML-RARA PML chr15 74033414 + RARA chr17 40348316 + Exonic hg38 LAML TCGA-AB-2982-03B 4 23 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 91440 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABR-YWHAE ABR chr17 1228793 - YWHAE chr17 1365058 - Exonic hg38 LAML TCGA-AB-2984-03A 1 0 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 91441 ChimerSeq TCGA FAWG TCGA_RNA-Seq HBG1-HBE1 HBG1 chr11 5248408 - HBE1 chr11 5269468 - Exonic hg38 LAML TCGA-AB-2985-03A 1 8 Out-of-frame Intra-chr p15.4 p15.4 91442 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2A-MLLT10 KMT2A chr11 118226405 + MLLT10 chr10 22229531 + Exonic hg38 LAML TCGA-AB-2985-03A 9 4 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor p12.31 Oncogene KB Pub 91443 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD28-FLT3 ANKRD28 chr3 15679476 - FLT3 chr13 28028288 - Exonic hg38 LAML TCGA-AB-2990-03B 1 0 Out-of-frame Inter-chr p25.1 q12.2 TK:PDGFR Oncogene Tumor suppressor gene 91444 ChimerSeq TCGA FAWG TCGA_RNA-Seq PML-RARA PML chr15 74023408 + RARA chr17 40348316 + Exonic hg38 LAML TCGA-AB-2991-03A 2 57 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 91445 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPN-MPO SPN chr16 29665434 + MPO chr17 58278190 - Exonic hg38 LAML TCGA-AB-2991-03A 1 8 Out-of-frame Inter-chr p11.2 q22 91446 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPO-NTNG2 MPO chr17 58279036 - NTNG2 chr9 132243684 + Exonic hg38 LAML TCGA-AB-2991-03A 1 6 Out-of-frame Inter-chr q22 q34.13 91447 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS8-MPO RPS8 chr1 44775906 + MPO chr17 58280915 - Exonic hg38 LAML TCGA-AB-2993-03A 1 0 Out-of-frame Inter-chr p34.1 q22 91448 ChimerSeq TCGA FAWG TCGA_RNA-Seq PML-RARA PML chr15 74033414 + RARA chr17 40348316 + Exonic hg38 LAML TCGA-AB-2994-03A 6 41 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 91449 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF18-INSR ARHGEF18 chr19 7447168 + INSR chr19 7267896 - Exonic hg38 LAML TCGA-AB-2994-03A 1 0 Out-of-frame Intra-chr p13.2 p13.2 TK:InsR Seq+ 91450 ChimerSeq TCGA FAWG TCGA_RNA-Seq PML-RARA PML chr15 74023408 + RARA chr17 40348316 + Exonic hg38 LAML TCGA-AB-2998-03A 8 55 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 91451 ChimerSeq TCGA FAWG TCGA_RNA-Seq PML-RARA PML chr15 74033414 + RARA chr17 40348316 + Exonic hg38 LAML TCGA-AB-2999-03B 2 15 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 91452 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNK1-RAD52 WNK1 chr12 868503 + RAD52 chr12 913192 - Exonic hg38 LAML TCGA-AB-2999-03B 1 0 Out-of-frame Intra-chr p13.33 p13.33 Seq+ 91453 ChimerSeq TCGA FAWG TCGA_RNA-Seq PML-RARA PML chr15 74023408 + RARA chr17 40342754 + Exonic hg38 LAML TCGA-AB-3001-03A 7 59 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 91454 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDCD6IPP1-PDCD6IPP2 PDCD6IPP1 chr15 22727172 + PDCD6IPP2 chr15 28856220 + Exonic hg38 LAML TCGA-AB-3005-03A 1 8 Out-of-frame Intra-chr q11.2 q13.1 91455 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTND2P28-CD74 MTND2P28 chr1 630642 + CD74 chr5 150401947 - Exonic hg38 LAML TCGA-AB-3005-03A 1 6 Out-of-frame Inter-chr p36.33 q33.1 91456 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2A-MLLT10 KMT2A chr11 118221668 + MLLT10 chr10 22291630 + Exonic hg38 LAML TCGA-AB-3005-03A 9 7 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor p12.31 Oncogene KB Pub 91457 ChimerSeq TCGA FAWG TCGA_RNA-Seq PML-RARA PML chr15 74023408 + RARA chr17 40348316 + Exonic hg38 LAML TCGA-AB-3007-03A 10 67 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 91458 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL13-MPO RPL13 chr16 89561671 + MPO chr17 58271859 - Exonic hg38 LAML TCGA-AB-3007-03A 1 5 Out-of-frame Inter-chr q24.3 q22 91459 ChimerSeq TCGA FAWG TCGA_RNA-Seq PML-RARA PML chr15 74024927 + RARA chr17 40348316 + Exonic hg38 LAML TCGA-AB-3012-03A 1 76 Out-of-frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 91460 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPSF6-PTPRB CPSF6 chr12 69239706 + PTPRB chr12 70581302 - Exonic hg38 LGG TCGA-CS-4941-01A 970 3430 Out-of-frame Intra-chr q15 q15 Seq+ 91461 ChimerSeq TCGA FAWG TCGA_RNA-Seq REV3L-FN3KRP REV3L chr6 111307361 - FN3KRP chr17 82726480 + Exonic hg38 LGG TCGA-CS-4942-01A 2 27 In-Frame Inter-chr q21 q25.3 Seq+ 91462 ChimerSeq TCGA FAWG TCGA_RNA-Seq FMR1-AFF2 FMR1 chrX 147921985 + AFF2 chrX 148651999 + Exonic hg38 LGG TCGA-CS-4942-01A 2 23 In-Frame Intra-chr q27.3 q28 Seq+ 91463 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K13-UTS2B MAP3K13 chr3 185363368 + UTS2B chr3 191328709 - Exonic hg38 LGG TCGA-CS-4942-01A 3 17 5'UTR-5'UTR Intra-chr q27.2 q28 Seq+ 91464 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD51AP1-ST8SIA1 RAD51AP1 chr12 4538956 + ST8SIA1 chr12 22249098 - Exonic hg38 LGG TCGA-CS-4943-01A 37 107 In-Frame Intra-chr p13.32 p12.1 Seq+ 91465 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOMM70-KCTD8 TOMM70 chr3 100400626 - KCTD8 chr4 44175250 - Exonic hg38 LGG TCGA-CS-4943-01A 24 125 Out-of-frame Inter-chr q12.2 p13 91466 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARL5B-CCDC102B ARL5B chr10 18659683 + CCDC102B chr18 68716528 + Exonic hg38 LGG TCGA-CS-4943-01A 3 11 CDS-5'UTR Inter-chr p12.31 q22.1 Seq+ 91467 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF577-GRIK5 ZNF577 chr19 51877282 - GRIK5 chr19 42006810 - Exonic hg38 LGG TCGA-CS-4943-01A 1 17 Out-of-frame Intra-chr q13.41 Transcription factor q13.2 Seq+ 91468 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2E1-ZNF385D UBE2E1 chr3 23807421 + ZNF385D chr3 21437203 - Exonic hg38 LGG TCGA-CS-4943-01A 1 3 Out-of-frame Intra-chr p24.2 p24.3 Transcription factor 91469 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTGDS-CLU PTGDS chr9 136977692 + CLU chr8 27598250 - Exonic hg38 LGG TCGA-CS-4944-01A 1 25 Out-of-frame Inter-chr q34.3 p21.1 Tumor suppressor gene 91470 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADNP2-PARD6G ADNP2 chr18 80109472 + PARD6G chr18 80202932 - Exonic hg38 LGG TCGA-CS-5393-01A 1 2 5'UTR-CDS Intra-chr q23 Transcription factor q23 Seq+ 91471 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIN9-KDM5B LIN9 chr1 226277775 - KDM5B chr1 202777094 - Exonic hg38 LGG TCGA-CS-5395-01A 7 22 Out-of-frame Intra-chr q42.12 Tumor suppressor gene q32.1 Transcription factor Seq+ 91472 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUSC2-ABAT RUSC2 chr9 35490172 + ABAT chr16 8764069 + Exonic hg38 LGG TCGA-CS-5397-01A 34 34 5'UTR-CDS Inter-chr p13.3 p13.2 Seq+ 91473 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMOX-EIF3D SMOX chr20 4148977 + EIF3D chr22 36526131 - Exonic hg38 LGG TCGA-CS-5397-01A 16 52 5'UTR-5'UTR Inter-chr p13 q12.3 Seq+ 91474 ChimerSeq TCGA FAWG TCGA_RNA-Seq AIP-LYZL6 AIP chr11 67483257 + LYZL6 chr17 35939558 - Exonic hg38 LGG TCGA-CS-5397-01A 8 48 CDS-5'UTR Inter-chr q13.2 Tumor suppressor gene q12 Seq+ 91475 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYS1-TAF15 SYS1 chr20 45363693 + TAF15 chr17 35842367 + Exonic hg38 LGG TCGA-CS-5397-01A 1 20 CDS-3'UTR Inter-chr q13.12 q12 91476 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKL2-ZNF200 MKL2 chr16 14234283 + ZNF200 chr16 3235360 - Exonic hg38 LGG TCGA-CS-5397-01A 4 4 Out-of-frame Intra-chr p13.12 p13.3 Transcription factor Seq+ 91477 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHB-GRIN2A SHB chr9 37955883 - GRIN2A chr16 9849961 - Exonic hg38 LGG TCGA-CS-5397-01A 3 6 Out-of-frame Inter-chr p13.1 p13.2 Tumor suppressor gene Seq+ 91478 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXN2-CTNNA1 TXN2 chr22 36480575 - CTNNA1 chr5 138723467 + Exonic hg38 LGG TCGA-CS-5397-01A 3 6 CDS-5'UTR Inter-chr q12.3 q31.2 Oncogene Seq+ 91479 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABAT-KIAA0430 ABAT chr16 8674711 + KIAA0430 chr16 15612777 - Exonic hg38 LGG TCGA-CS-5397-01A 1 12 Out-of-frame Intra-chr p13.2 Seq+ 91480 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM219A-MKL2 FAM219A chr9 34458204 - MKL2 chr16 14210243 + Exonic hg38 LGG TCGA-CS-5397-01A 3 4 Out-of-frame Inter-chr p13.3 p13.12 Seq+ 91481 ChimerSeq TCGA FAWG TCGA_RNA-Seq UTP6-PABPC1L UTP6 chr17 31878250 - PABPC1L chr20 44930518 + Exonic hg38 LGG TCGA-CS-5397-01A 1 10 CDS-5'UTR Inter-chr q11.2 q13.12 91482 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDIP1-SGF29 CDIP1 chr16 4538702 - SGF29 chr16 28581055 + Exonic hg38 LGG TCGA-CS-5397-01A 1 4 5'UTR-5'UTR Intra-chr p13.3 p11.2 91483 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHISA9-CCL19 SHISA9 chr16 13203549 + CCL19 chr9 34690342 - Exonic hg38 LGG TCGA-CS-5397-01A 1 4 In-Frame Inter-chr p13.12 p13.3 91484 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-ELAVL3 FGFR3 chr4 1806934 + ELAVL3 chr19 11466827 - Exonic hg38 LGG TCGA-CS-6186-01A 53 379 In-Frame Inter-chr p16.3 TK:FGFR Oncogene p13.2 Seq+ 91485 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP1-BCAN LRP1 chr12 57202537 + BCAN chr1 156657675 + Exonic hg38 LGG TCGA-CS-6186-01A 1 5 In-Frame Inter-chr q13.3 q23.1 91486 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAMP2-DBN1 SCAMP2 chr15 74873199 - DBN1 chr5 177460703 - Exonic hg38 LGG TCGA-CS-6186-01A 2 1 In-Frame Inter-chr q24.1 q35.3 91487 ChimerSeq TCGA FAWG TCGA_RNA-Seq MFSD2A-LAPTM5 MFSD2A chr1 39955385 + LAPTM5 chr1 30742549 - Exonic hg38 LGG TCGA-CS-6188-01A 27 241 In-Frame Intra-chr p34.2 Tumor suppressor gene p35.2 Seq+ 91488 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNIP1-KIF17 SNIP1 chr1 37552645 - KIF17 chr1 20666331 - Exonic hg38 LGG TCGA-CS-6188-01A 3 59 In-Frame Intra-chr p34.3 p36.12 Seq+ 91489 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC9-CPQ HDAC9 chr7 18087213 + CPQ chr8 97066009 + Exonic hg38 LGG TCGA-CS-6188-01A 1 7 5'UTR-CDS Inter-chr p21.1 q22.1 91490 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATRX-ZNF304 ATRX chrX 77785982 - ZNF304 chr19 57353725 + Exonic hg38 LGG TCGA-CS-6290-01A 10 52 Out-of-frame Inter-chr q21.1 Oncogene q13.43 Transcription factor Seq+ 91491 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP46-PDGFRA USP46 chr4 52659115 - PDGFRA chr4 54274531 + Exonic hg38 LGG TCGA-CS-6665-01A 156 720 Out-of-frame Intra-chr q12 q12 Oncogene Seq+ 91492 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCUN1D4-SGCB DCUN1D4 chr4 51843267 + SGCB chr4 52033640 - Exonic hg38 LGG TCGA-CS-6665-01A 22 93 Out-of-frame Intra-chr q12 q12 Seq+ 91493 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM165-PDGFRA TMEM165 chr4 55396396 + PDGFRA chr4 54267289 + Exonic hg38 LGG TCGA-CS-6665-01A 5 15 In-Frame Intra-chr q12 q12 Oncogene Seq+ 91494 ChimerSeq TCGA FAWG TCGA_RNA-Seq VMP1-SUZ12P1 VMP1 chr17 59738947 + SUZ12P1 chr17 30768834 + Exonic hg38 LGG TCGA-CS-6665-01A 3 10 5'UTR-5'UTR Intra-chr q23.1 q11.2 91495 ChimerSeq TCGA FAWG TCGA_RNA-Seq LNX1-DANCR LNX1 chr4 53557874 - DANCR chr4 52712824 + Exonic hg38 LGG TCGA-CS-6665-01A 2 4 CDS-5'UTR Intra-chr q12 q12 91496 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXW7-TMEM126B FBXW7 chr4 152534941 - TMEM126B chr11 85634086 + Exonic hg38 LGG TCGA-CS-6666-01A 3 9 5'UTR-5'UTR Inter-chr q31.3 Oncogene Tumor suppressor gene q14.1 Seq+ 91497 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB7C-FBXO15 ZBTB7C chr18 48338174 - FBXO15 chr18 74073730 - Exonic hg38 LGG TCGA-CS-6666-01A 3 4 5'UTR-CDS Intra-chr q21.1 Tumor suppressor gene Transcription factor q22.3 Seq+ 91498 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC4-BRAT1 HDAC4 chr2 239081095 - BRAT1 chr7 2554447 - Exonic hg38 LGG TCGA-CS-6666-01A 2 7 CDS-5'UTR Inter-chr q37.3 p22.3 Seq+ 91499 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHC2-TJP3 SHC2 chr19 440862 - TJP3 chr19 3750138 + Exonic hg38 LGG TCGA-DB-5270-01A 5 16 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 91500 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC94-MAP2K2 CCDC94 chr19 4254489 + MAP2K2 chr19 4110655 - Exonic hg38 LGG TCGA-DB-5270-01A 1 4 Out-of-frame Intra-chr p13.3 p13.3 STE:STE7 Oncogene 91501 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF704-FAM49B ZNF704 chr8 80821374 - FAM49B chr8 129842205 - Exonic hg38 LGG TCGA-DB-5270-01A 1 3 In-Frame Intra-chr q21.13 Transcription factor q24.21 91502 ChimerSeq TCGA FAWG TCGA_RNA-Seq FARP1-NME1 FARP1 chr13 98213413 + NME1 chr17 51159980 + Exonic hg38 LGG TCGA-DB-5275-01A 23 213 In-Frame Inter-chr q32.2 q21.33 Tumor suppressor gene Seq+ 91503 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAG9-CLYBL SPAG9 chr17 51120354 - CLYBL chr13 99866240 + Exonic hg38 LGG TCGA-DB-5275-01A 1 34 Out-of-frame Inter-chr q21.33 q32.3 Seq+ 91504 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRIA4-NAALAD2 GRIA4 chr11 105862208 + NAALAD2 chr11 90173824 + Exonic hg38 LGG TCGA-DB-5277-01A 28 113 CDS-3'UTR Intra-chr q22.3 q14.3 Seq+ 91505 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGDCC3-GLDN IGDCC3 chr15 65375097 - GLDN chr15 51383785 + Exonic hg38 LGG TCGA-DB-5277-01A 34 69 In-Frame Intra-chr q22.31 q21.2 Seq+ 91506 ChimerSeq TCGA FAWG TCGA_RNA-Seq BICD1-ZNF438 BICD1 chr12 32338979 + ZNF438 chr10 30849443 - Exonic hg38 LGG TCGA-DB-5277-01A 4 6 CDS-3'UTR Inter-chr p11.21 p11.23 Transcription factor Seq+ 91507 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPRED2-NAPG SPRED2 chr2 65431962 - NAPG chr18 10530770 + Exonic hg38 LGG TCGA-DB-5277-01A 2 14 In-Frame Inter-chr p14 p11.22 Seq+ 91508 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCNT-DIP2A PCNT chr21 46367139 + DIP2A chr21 46560722 + Exonic hg38 LGG TCGA-DB-5277-01A 3 9 In-Frame Intra-chr q22.3 q22.3 Seq+ 91509 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLCO3A1-HDDC3 SLCO3A1 chr15 91854088 + HDDC3 chr15 90932110 - Exonic hg38 LGG TCGA-DB-5277-01A 2 11 Out-of-frame Intra-chr q26.1 q26.1 Seq+ 91510 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBN1-THSD4 FBN1 chr15 48610728 - THSD4 chr15 71660530 + Exonic hg38 LGG TCGA-DB-5277-01A 1 6 Out-of-frame Intra-chr q21.1 q23 Seq+ 91511 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAPER-ZNF592 SCAPER chr15 76504859 - ZNF592 chr15 84778183 + Exonic hg38 LGG TCGA-DB-5277-01A 1 6 CDS-5'UTR Intra-chr q24.3 q25.3 Transcription factor 91512 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP13-NTRK3 AKAP13 chr15 85684873 + NTRK3 chr15 88033045 - Exonic hg38 LGG TCGA-DB-5277-01A 1 5 Out-of-frame Intra-chr q25.3 q25.3 Oncogene Tumor suppressor gene Seq+ 91513 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGG-SUGCT PIGG chr4 500601 + SUGCT chr7 40749434 + Exonic hg38 LGG TCGA-DB-5277-01A 1 2 In-Frame Inter-chr p16.3 p14.1 91514 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNND2-MTMR12 CTNND2 chr5 11346372 - MTMR12 chr5 32263242 - Exonic hg38 LGG TCGA-DB-5281-01A 1 21 Out-of-frame Intra-chr p15.2 p13.3 91515 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM2-PDE4A DNM2 chr19 10718403 + PDE4A chr19 10446218 + Exonic hg38 LGG TCGA-DB-A4XB-01A 3 14 In-Frame Intra-chr p13.2 p13.2 Seq+ 91516 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHKA1-HDAC8 PHKA1 chrX 72695708 - HDAC8 chrX 72351838 - Exonic hg38 LGG TCGA-DB-A4XB-01A 1 1 Out-of-frame Intra-chr q13.1 q13.1 91517 ChimerSeq TCGA FAWG TCGA_RNA-Seq MINDY3-CACNB2 MINDY3 chr10 15860206 - CACNB2 chr10 18498355 + Exonic hg38 LGG TCGA-DB-A4XE-01A 1 4 Out-of-frame Intra-chr p13 p12.33 91518 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATRX-BCL2 ATRX chrX 77785982 - BCL2 chr18 63128759 - Exonic hg38 LGG TCGA-DB-A4XF-01A 13 74 Out-of-frame Inter-chr q21.1 Oncogene q21.33 Oncogene Seq+ 91519 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-RNFT1 BCAS3 chr17 61084564 + RNFT1 chr17 59963284 - Exonic hg38 LGG TCGA-DB-A4XF-01A 3 10 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 91520 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBNO1-RILPL2 SBNO1 chr12 123364701 - RILPL2 chr12 123423157 - Exonic hg38 LGG TCGA-DB-A4XF-01A 3 6 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 91521 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNN2-C2CD4C CNN2 chr19 1031192 + C2CD4C chr19 408401 - Exonic hg38 LGG TCGA-DB-A4XH-01A 2 20 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 91522 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA7-ABCC8 PLEKHA7 chr11 17013989 - ABCC8 chr11 17463604 - Exonic hg38 LGG TCGA-DB-A4XH-01A 1 2 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 91523 ChimerSeq TCGA FAWG TCGA_RNA-Seq WASF2-TMEM222 WASF2 chr1 27489986 - TMEM222 chr1 27330720 + Exonic hg38 LGG TCGA-DB-A64O-01A 2 41 5'UTR-5'UTR Intra-chr p36.11 p36.11 Seq+ 91524 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHACTR4-FAM76A PHACTR4 chr1 28407463 + FAM76A chr1 27755195 + Exonic hg38 LGG TCGA-DB-A64P-01A 1 4 Out-of-frame Intra-chr p35.3 Tumor suppressor gene p35.3 91525 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACACA-WASIR2 ACACA chr17 37111531 - WASIR2 chr16 22958 + Exonic hg38 LGG TCGA-DB-A64Q-01A 6 14 5'UTR-5'UTR Inter-chr p13.3 Seq+ 91526 ChimerSeq TCGA FAWG TCGA_RNA-Seq C19orf24-PALM C19orf24 chr19 1275830 + PALM chr19 726138 + Exonic hg38 LGG TCGA-DB-A64U-01A 2 22 In-Frame Intra-chr p13.3 p13.3 Seq+ 91527 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRL3-GPM6A ADGRL3 chr4 61201765 + GPM6A chr4 175701767 - Exonic hg38 LGG TCGA-DB-A64V-01A 2 1 5'UTR-CDS Intra-chr q13.1 Oncogene q34.2 91528 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRL3-DBX2 ADGRL3 chr4 61587440 + DBX2 chr12 45036114 - Exonic hg38 LGG TCGA-DB-A64X-01A 1 7 Out-of-frame Inter-chr q13.1 Oncogene q12 Transcription factor 91529 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLOCK-NMU CLOCK chr4 55546482 - NMU chr4 55600575 - Exonic hg38 LGG TCGA-DB-A75O-01A 1 18 5'UTR-CDS Intra-chr q12 Transcription factor q12 Seq+ 91530 ChimerSeq TCGA FAWG TCGA_RNA-Seq NMT1-NLK NMT1 chr17 45096285 + NLK chr17 28122603 + Exonic hg38 LGG TCGA-DB-A75O-01A 1 5 In-Frame Intra-chr q21.31 q11.2 CMGC:MAPK Seq+ 91531 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF6-USP18 RNF6 chr13 26218512 - USP18 chr22 18176771 + Exonic hg38 LGG TCGA-DB-A75O-01A 1000 1000 Out-of-frame Inter-chr q12.13 q11.21 91532 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOX10-FAM168A SOX10 chr22 37977867 - FAM168A chr11 73411536 - Exonic hg38 LGG TCGA-DH-5140-01A 78 429 In-Frame Inter-chr q13.1 Transcription factor q13.4 Seq+ 91533 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMBRA1-CCDC61 AMBRA1 chr11 46593828 - CCDC61 chr19 46003008 + Exonic hg38 LGG TCGA-DH-5142-01A 8 21 5'UTR-5'UTR Inter-chr p11.2 q13.32 Seq+ 91534 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC61-CHST1 CCDC61 chr19 46003501 + CHST1 chr11 45652606 - Exonic hg38 LGG TCGA-DH-5142-01A 2 23 CDS-5'UTR Inter-chr q13.32 p11.2 Seq+ 91535 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARD3-LYAR PARD3 chr10 34814876 - LYAR chr4 4274769 - Exonic hg38 LGG TCGA-DH-A669-01A 52 214 In-Frame Inter-chr p11.21 p16.3 Seq+ 91536 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD2-CPLX1 NSD2 chr4 1918623 + CPLX1 chr4 792608 - Exonic hg38 LGG TCGA-DH-A669-01A 1 305 Out-of-frame Intra-chr p16.3 p16.3 91537 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMYND11-SORBS2 ZMYND11 chr10 247466 + SORBS2 chr4 185593935 - Exonic hg38 LGG TCGA-DH-A669-01A 14 137 In-Frame Inter-chr p15.3 Tumor suppressor gene q35.1 Seq+ 91538 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R2C-CTBP1 PPP2R2C chr4 6347846 - CTBP1 chr4 1213605 - Exonic hg38 LGG TCGA-DH-A669-01A 4 18 Out-of-frame Intra-chr p16.1 Tumor suppressor gene p16.3 Seq+ 91539 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDLIM3-ZFYVE28 PDLIM3 chr4 185535342 - ZFYVE28 chr4 2354073 - Exonic hg38 LGG TCGA-DH-A669-01A 3 20 In-Frame Intra-chr q35.1 p16.3 Seq+ 91540 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM193A-PPP2R2C FAM193A chr4 2631169 + PPP2R2C chr4 6333731 - Exonic hg38 LGG TCGA-DH-A669-01A 3 13 Out-of-frame Intra-chr p16.3 p16.1 Tumor suppressor gene Seq+ 91541 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFYVE28-CCDC149 ZFYVE28 chr4 2418285 - CCDC149 chr4 24876697 - Exonic hg38 LGG TCGA-DH-A669-01A 2 9 In-Frame Intra-chr p16.3 p15.2 Seq+ 91542 ChimerSeq TCGA FAWG TCGA_RNA-Seq C4orf19-FAM114A1 C4orf19 chr4 37454040 + FAM114A1 chr4 38922770 + Exonic hg38 LGG TCGA-DH-A669-01A 2 3 5'UTR-5'UTR Intra-chr p14 p14 91543 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND1A-ASTN2 DENND1A chr9 123557570 - ASTN2 chr9 116426088 - Exonic hg38 LGG TCGA-DH-A66B-01A 12 36 Out-of-frame Intra-chr q33.3 q33.1 Seq+ 91544 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCN8A-ATF1 SCN8A chr12 51790502 + ATF1 chr12 50795909 + Exonic hg38 LGG TCGA-DH-A66G-01A 7 6 In-Frame Intra-chr q13.13 q13.12 Oncogene Transcription factor Seq+ 91545 ChimerSeq TCGA FAWG TCGA_RNA-Seq PABPC1-KHDRBS3 PABPC1 chr8 100712652 - KHDRBS3 chr8 135542654 + Exonic hg38 LGG TCGA-DH-A66G-01A 2 4 In-Frame Intra-chr q22.3 q24.23 Seq+ 91546 ChimerSeq TCGA FAWG TCGA_RNA-Seq AACS-TMEM132B AACS chr12 125118765 + TMEM132B chr12 125583851 + Exonic hg38 LGG TCGA-DH-A66G-01A 2 2 Out-of-frame Intra-chr q24.31 q24.31 91547 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS20-C12orf43 ADAMTS20 chr12 43369290 - C12orf43 chr12 121004492 - Exonic hg38 LGG TCGA-DH-A7UT-01A 2 1 Out-of-frame Intra-chr q12 Oncogene q24.31 91548 ChimerSeq TCGA FAWG TCGA_RNA-Seq GDF11-HOXC8 GDF11 chr12 55749883 + HOXC8 chr12 54011089 + Exonic hg38 LGG TCGA-DH-A7UV-01A 1 6 3'UTR-CDS Intra-chr q13.2 q13.13 Transcription factor Seq+ 91549 ChimerSeq TCGA FAWG TCGA_RNA-Seq LANCL2-VOPP1 LANCL2 chr7 55412089 + VOPP1 chr7 55497690 - Exonic hg38 LGG TCGA-DH-A7UV-01A 1000 1000 In-Frame Intra-chr p11.2 p11.2 91550 ChimerSeq TCGA FAWG TCGA_RNA-Seq MALRD1-PIP4K2A MALRD1 chr10 19730781 + PIP4K2A chr10 22609717 - Exonic hg38 LGG TCGA-DU-5847-01A 1 4 In-Frame Intra-chr p12.31 p12.2 91551 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55202625 + SEPT14 chr7 55796092 - Exonic hg38 LGG TCGA-DU-5852-01A 1 1 Out-of-frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 91552 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53-GID4 TP53 chr17 7687377 - GID4 chr17 18045147 + Exonic hg38 LGG TCGA-DU-5853-01A 5 32 5'UTR-CDS Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p11.2 Seq+ 91553 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX30-LPAR1 SNX30 chr9 112751157 + LPAR1 chr9 110875722 - Exonic hg38 LGG TCGA-DU-5853-01A 1 4 Out-of-frame Intra-chr q32 q31.3 Seq+ 91554 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRL3-GPM6A ADGRL3 chr4 61813889 + GPM6A chr4 175701767 - Exonic hg38 LGG TCGA-DU-5854-01A 4 5 In-Frame Intra-chr q13.1 Oncogene q34.2 91555 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARK2-STRADA PARK2 chr6 161548854 - STRADA chr17 63704582 - Exonic hg38 LGG TCGA-DU-5854-01A 1 10 Out-of-frame Inter-chr Tumor suppressor gene q23.3 Tumor suppressor gene Seq+ 91556 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN12-DYNC1I1 PTPN12 chr7 77537645 + DYNC1I1 chr7 96076057 + Exonic hg38 LGG TCGA-DU-5855-01A 104 250 In-Frame Intra-chr q11.23 Tumor suppressor gene q21.3 Seq+ 91557 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMK2D-ANK2 CAMK2D chr4 113515069 - ANK2 chr4 113258050 + Exonic hg38 LGG TCGA-DU-5855-01A 11 32 In-Frame Intra-chr q26 q25 Seq+ 91558 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB44-BACE1 ZBTB44 chr11 130236110 - BACE1 chr11 117296961 - Exonic hg38 LGG TCGA-DU-5855-01A 1 13 3'UTR-CDS Intra-chr q24.3 Transcription factor q23.3 91559 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRE11-YAP1 MRE11 chr11 94429911 - YAP1 chr11 102162456 + Exonic hg38 LGG TCGA-DU-5855-01A 1 7 Out-of-frame Intra-chr q21 q22.1 Tumor suppressor gene 91560 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARCH8-DEFB119 2019_ 3_ 8_ chr10 45594235 - DEFB119 chr20 31378391 - Exonic hg38 LGG TCGA-DU-5871-01A 2 11 Out-of-frame Inter-chr q11.21 Seq+ 91561 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFMBT2-TGM2 SFMBT2 chr10 7367649 - TGM2 chr20 38161599 - Exonic hg38 LGG TCGA-DU-5871-01A 1 11 In-Frame Inter-chr p14 q11.23 Seq+ 91562 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG7-PPARG ATG7 chr3 11426926 + PPARG chr3 12433898 + Exonic hg38 LGG TCGA-DU-5871-01A 1 4 In-Frame Intra-chr p25.3 p25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 91563 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD7-CREM SETD7 chr4 139517885 - CREM chr10 35148368 + Exonic hg38 LGG TCGA-DU-5871-01A 1 3 In-Frame Inter-chr q31.1 p11.21 Tumor suppressor gene Transcription factor 91564 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPHP4-ACOT7 NPHP4 chr1 5992244 - ACOT7 chr1 6294980 - Exonic hg38 LGG TCGA-DU-6395-01A 2 19 5'UTR-CDS Intra-chr p36.31 p36.31 Seq+ 91565 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNAB2-KIF1B KCNAB2 chr1 5992788 + KIF1B chr1 10256247 + Exonic hg38 LGG TCGA-DU-6395-01A 2 3 5'UTR-CDS Intra-chr p36.31 p36.22 Tumor suppressor gene Seq+ 91566 ChimerSeq TCGA FAWG TCGA_RNA-Seq BSN-ARL8B BSN chr3 49643152 + ARL8B chr3 5170503 + Exonic hg38 LGG TCGA-DU-6396-01A 1 18 In-Frame Intra-chr p21.31 p26.1 Seq+ 91567 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST3GAL5-IMMT ST3GAL5 chr2 85844396 - IMMT chr2 86147833 - Exonic hg38 LGG TCGA-DU-6396-01A 1 3 In-Frame Intra-chr p11.2 p11.2 91568 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNGR1-TAB1 SYNGR1 chr22 39377824 + TAB1 chr22 39415006 + Exonic hg38 LGG TCGA-DU-6396-01A 1000 1000 3'UTR-CDS Intra-chr q13.1 q13.1 91569 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAD2B-SF3B6 ATAD2B chr2 23869663 - SF3B6 chr2 24067851 - Exonic hg38 LGG TCGA-DU-6397-01A 2 5 Out-of-frame Intra-chr p23.3 p23.3 91570 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTERF3-CCDC178 MTERF3 chr8 96250906 - CCDC178 chr18 32974681 - Exonic hg38 LGG TCGA-DU-6397-01A 1 7 Out-of-frame Inter-chr q22.1 Transcription factor q12.1 91571 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLL3-SUPT5H DLL3 chr19 39507914 + SUPT5H chr19 39453356 + Exonic hg38 LGG TCGA-DU-6400-01A 1000 1000 In-Frame Intra-chr q13.2 q13.2 91572 ChimerSeq TCGA FAWG TCGA_RNA-Seq GDI2-CPVL GDI2 chr10 5800598 - CPVL chr7 29121071 - Exonic hg38 LGG TCGA-DU-6401-01A 16 35 CDS-5'UTR Inter-chr p15.1 p14.3 Seq+ 91573 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABR-MAN2B1 ABR chr17 1091665 - MAN2B1 chr19 12665805 - Exonic hg38 LGG TCGA-DU-6402-01A 13 48 5'UTR-CDS Inter-chr p13.3 p13.13 Seq+ 91574 ChimerSeq TCGA FAWG TCGA_RNA-Seq XRCC6-UBE2D2 XRCC6 chr22 41637791 + UBE2D2 chr5 139614586 + Exonic hg38 LGG TCGA-DU-6402-01A 3 10 Out-of-frame Inter-chr q13.2 q31.2 Seq+ 91575 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L2-MYLIP EPB41L2 chr6 131063155 - MYLIP chr6 16130557 + Exonic hg38 LGG TCGA-DU-6402-01A 1 4 5'UTR-CDS Intra-chr q23.2 p22.3 91576 ChimerSeq TCGA FAWG TCGA_RNA-Seq BACH2-MAP3K7 BACH2 chr6 90206569 - MAP3K7 chr6 90571807 - Exonic hg38 LGG TCGA-DU-6403-01A 4 22 5'UTR-CDS Intra-chr q15 Transcription factor q15 STE:STE11 Oncogene Seq+ 91577 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD4A-OR13A1 FRMD4A chr10 14008060 - OR13A1 chr10 45304500 - Exonic hg38 LGG TCGA-DU-6403-01A 4 7 CDS-5'UTR Intra-chr p13 Seq+ 91578 ChimerSeq TCGA FAWG TCGA_RNA-Seq EP300-BCOR EP300 chr22 41177816 + BCOR chrX 40071159 - Exonic hg38 LGG TCGA-DU-6404-01A 31 274 Out-of-frame Inter-chr q13.2 Oncogene p11.4 Oncogene Seq+ 91579 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCOR-EP300 BCOR chrX 40072055 - EP300 chr22 41179153 + Exonic hg38 LGG TCGA-DU-6404-01A 26 130 Out-of-frame Inter-chr p11.4 Oncogene q13.2 Oncogene Seq+ 91580 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCOR-L3MBTL2 BCOR chrX 40072349 - L3MBTL2 chr22 41205251 + Exonic hg38 LGG TCGA-DU-6404-01A 7 142 CDS-5'UTR Inter-chr p11.4 Oncogene q13.2 Seq+ 91581 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABR-YWHAE ABR chr17 1228793 - YWHAE chr17 1345499 - Exonic hg38 LGG TCGA-DU-6404-01A 1 1 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 91582 ChimerSeq TCGA FAWG TCGA_RNA-Seq PACRG-QKI PACRG chr6 162814281 + QKI chr6 163561982 + Exonic hg38 LGG TCGA-DU-6404-01A 1 1 In-Frame Intra-chr q26 Tumor suppressor gene q26 91583 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55200413 + SEPT14 chr7 55796092 - Exonic hg38 LGG TCGA-DU-6406-01A 820 2270 Out-of-frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 91584 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIM2-KCNJ6 SIM2 chr21 36699921 + KCNJ6 chr21 37840709 - Exonic hg38 LGG TCGA-DU-6406-01A 8 58 CDS-5'UTR Intra-chr q22.13 Transcription factor q22.13 Seq+ 91585 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSCR3-NIPBL DSCR3 chr21 37267238 - NIPBL chr5 37019311 + Exonic hg38 LGG TCGA-DU-6406-01A 7 22 Out-of-frame Inter-chr q22.13 p13.2 Seq+ 91586 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMBRD2-ERG LMBRD2 chr5 36108534 - ERG chr21 38380401 - Exonic hg38 LGG TCGA-DU-6406-01A 3 14 CDS-3'UTR Inter-chr p13.2 q22.2 Oncogene Transcription factor Seq+ 91587 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC3-BRWD1 TTC3 chr21 37126143 + BRWD1 chr21 39264685 - Exonic hg38 LGG TCGA-DU-6406-01A 1 21 Out-of-frame Intra-chr q22.13 q22.2 Seq+ 91588 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGFR-SEPT14 EGFR chr7 55200413 + SEPT14 chr7 55796092 - Exonic hg38 LGG TCGA-DU-6407-01A 1 1 Out-of-frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 91589 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREBBP-ENPP7P14 CREBBP chr16 3879832 - ENPP7P14 chr16 5111430 - Exonic hg38 LGG TCGA-DU-6408-01A 24 90 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 91590 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNRIP1-ZNF638 CNRIP1 chr2 68317157 - ZNF638 chr2 71396141 + Exonic hg38 LGG TCGA-DU-6410-01A 2 1 Out-of-frame Intra-chr p14 p13.3 91591 ChimerSeq TCGA FAWG TCGA_RNA-Seq NKD1-NOD2 NKD1 chr16 50632407 + NOD2 chr16 50707854 + Exonic hg38 LGG TCGA-DU-6410-01A 1000 1000 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 91592 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLG1-CFDP1 GLG1 chr16 74606657 - CFDP1 chr16 75294042 - Exonic hg38 LGG TCGA-DU-6542-01A 7 52 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 91593 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDE2-CCDC190 SDE2 chr1 225999193 - CCDC190 chr1 162859658 - Exonic hg38 LGG TCGA-DU-6542-01A 5 18 CDS-5'UTR Intra-chr q42.12 q23.3 91594 ChimerSeq TCGA FAWG TCGA_RNA-Seq RYR2-WLS RYR2 chr1 237042569 + WLS chr1 68194227 - Exonic hg38 LGG TCGA-DU-6542-01A 7 3 5'UTR-CDS Intra-chr q43 p31.3 Seq+ 91595 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM5B-UAP1 KDM5B chr1 202808102 - UAP1 chr1 162566012 + Exonic hg38 LGG TCGA-DU-6542-01A 3 9 CDS-5'UTR Intra-chr q32.1 Transcription factor q23.3 Seq+ 91596 ChimerSeq TCGA FAWG TCGA_RNA-Seq NMNAT2-ATF6 NMNAT2 chr1 183418183 - ATF6 chr1 161778244 + Exonic hg38 LGG TCGA-DU-6542-01A 2 9 In-Frame Intra-chr q25.3 q23.3 Transcription factor Seq+ 91597 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF21B-F13B KIF21B chr1 201023343 - F13B chr1 197063057 - Exonic hg38 LGG TCGA-DU-6542-01A 1 5 Out-of-frame Intra-chr q32.1 q31.3 Seq+ 91598 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOR1AIP1-FAM20B TOR1AIP1 chr1 179914054 + FAM20B chr1 179063927 + Exonic hg38 LGG TCGA-DU-6542-01A 1 5 In-Frame Intra-chr q25.2 q25.2 91599 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIMM9-FCF1 TIMM9 chr14 58424008 - FCF1 chr14 74723272 + Exonic hg38 LGG TCGA-DU-7006-01A 28 192 5'UTR-CDS Intra-chr q23.1 q24.3 Seq+ 91600 ChimerSeq TCGA FAWG TCGA_RNA-Seq BFAR-SPNS1 BFAR chr16 14655210 + SPNS1 chr16 28982857 + Exonic hg38 LGG TCGA-DU-7006-01A 11 69 3'UTR-CDS Intra-chr p11.2 Seq+ 91601 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUFU-ZCCHC24 SUFU chr10 102550106 + ZCCHC24 chr10 79394440 - Exonic hg38 LGG TCGA-DU-7006-01A 5 19 Out-of-frame Intra-chr q24.32 Oncogene Tumor suppressor gene q22.3 Seq+ 91602 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KA2-MCHR2 RPS6KA2 chr6 166858200 - MCHR2 chr6 99956174 - Exonic hg38 LGG TCGA-DU-7006-01A 5 13 CDS-5'UTR Intra-chr q27 Oncogene Tumor suppressor gene q16.2 Seq+ 91603 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNA13-NR3C1 GNA13 chr17 65053502 - NR3C1 chr5 143282725 - Exonic hg38 LGG TCGA-DU-7006-01A 4 11 Out-of-frame Inter-chr q24.1 q31.3 Transcription factor Seq+ 91604 ChimerSeq TCGA FAWG TCGA_RNA-Seq RGS6-NPAS3 RGS6 chr14 72510279 + NPAS3 chr14 33676211 + Exonic hg38 LGG TCGA-DU-7006-01A 2 14 Out-of-frame Intra-chr q24.2 q13.1 Transcription factor Seq+ 91605 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIFR-PNPLA8 LIFR chr5 38556334 - PNPLA8 chr7 108521521 - Exonic hg38 LGG TCGA-DU-7006-01A 2 3 5'UTR-5'UTR Inter-chr p13.1 Oncogene Tumor suppressor gene q31.1 Seq+ 91606 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN1-HIGD1B ATXN1 chr6 16657776 - HIGD1B chr17 44848060 + Exonic hg38 LGG TCGA-DU-7006-01A 1 3 5'UTR-5'UTR Inter-chr p22.3 q21.31 91607 ChimerSeq TCGA FAWG TCGA_RNA-Seq C14orf37-KIAA0586 C14orf37 chr14 58297955 - KIAA0586 chr14 58508555 + Exonic hg38 LGG TCGA-DU-7006-01A 1000 1000 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 91608 ChimerSeq TCGA FAWG TCGA_RNA-Seq BICD1-SOX5 BICD1 chr12 32107544 + SOX5 chr12 23665564 - Exonic hg38 LGG TCGA-DU-7007-01A 13 168 In-Frame Intra-chr p11.21 p12.1 Transcription factor Seq+ 91609 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMTC1-CASC1 TMTC1 chr12 29512043 - CASC1 chr12 25111939 - Exonic hg38 LGG TCGA-DU-7007-01A 8 64 In-Frame Intra-chr p11.22 p12.1 Tumor suppressor gene Seq+ 91610 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNK1-STK38L WNK1 chr12 754324 + STK38L chr12 27302137 + Exonic hg38 LGG TCGA-DU-7007-01A 5 39 Out-of-frame Intra-chr p13.33 p11.23 Seq+ 91611 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGD4-CCDC91 FGD4 chr12 32502338 + CCDC91 chr12 28362438 + Exonic hg38 LGG TCGA-DU-7007-01A 3 28 5'UTR-CDS Intra-chr p11.21 p11.22 Seq+ 91612 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNDC3A-IT1 FNDC3A chr13 49145935 + IT1 chr13 102294040 - Exonic hg38 LGG TCGA-DU-7007-01A 3 8 Out-of-frame Intra-chr q14.2 91613 ChimerSeq TCGA FAWG TCGA_RNA-Seq HAUS2-SNAP23 HAUS2 chr15 42548965 + SNAP23 chr15 42545136 + Exonic hg38 LGG TCGA-DU-7007-01A 1 12 CDS-3'UTR Intra-chr q15.2 q15.1 91614 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARP11-ITPR2 PARP11 chr12 3821873 - ITPR2 chr12 26725765 - Exonic hg38 LGG TCGA-DU-7007-01A 1 8 Out-of-frame Intra-chr p13.32 p11.23 91615 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC91-TSPAN11 CCDC91 chr12 28362515 + TSPAN11 chr12 30953981 + Exonic hg38 LGG TCGA-DU-7007-01A 1 4 CDS-5'UTR Intra-chr p11.22 p11.21 91616 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERC1-PHC1 ERC1 chr12 1236904 + PHC1 chr12 8917630 + Exonic hg38 LGG TCGA-DU-7007-01A 1 4 5'UTR-5'UTR Intra-chr p13.31 91617 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOX5-MANSC1 SOX5 chr12 23604387 - MANSC1 chr12 12343414 - Exonic hg38 LGG TCGA-DU-7007-01A 1000 1000 CDS-5'UTR Intra-chr p12.1 Transcription factor Seq+ 91618 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRXN3-ADCK1 NRXN3 chr14 78170674 + ADCK1 chr14 77887091 + Exonic hg38 LGG TCGA-DU-7008-01A 3 5 5'UTR-5'UTR Intra-chr q24.3 q24.3 Atypical:ABC1 Seq+ 91619 ChimerSeq TCGA FAWG TCGA_RNA-Seq OS9-KIF5A OS9 chr12 57694926 + KIF5A chr12 57567126 + Exonic hg38 LGG TCGA-DU-7013-01A 11 69 In-Frame Intra-chr q13.3 q13.3 Seq+ 91620 ChimerSeq TCGA FAWG TCGA_RNA-Seq AVIL-MBD6 AVIL chr12 57814152 - MBD6 chr12 57527848 + Exonic hg38 LGG TCGA-DU-7013-01A 4 28 Out-of-frame Intra-chr q14.1 q13.3 Transcription factor Seq+ 91621 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCTN2-TSPAN31 DCTN2 chr12 57532015 - TSPAN31 chr12 57743240 + Exonic hg38 LGG TCGA-DU-7013-01A 1 16 CDS-5'UTR Intra-chr q13.3 q14.1 91622 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSP2-B4GALNT1 CTDSP2 chr12 57846372 - B4GALNT1 chr12 57632133 - Exonic hg38 LGG TCGA-DU-7013-01A 1 1 CDS-5'UTR Intra-chr q14.1 q13.3 Seq+ 91623 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF25-AVIL ARHGEF25 chr12 57619379 + AVIL chr12 57816361 - Exonic hg38 LGG TCGA-DU-7013-01A 1000 1000 Out-of-frame Intra-chr q13.3 q14.1 91624 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA2026-CMTM7 KIAA2026 chr9 6007195 - CMTM7 chr3 32441840 + Exonic hg38 LGG TCGA-DU-7014-01A 6 21 Out-of-frame Inter-chr p24.1 p22.3 Seq+ 91625 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH1-SDCCAG3 NOTCH1 chr9 136507955 - SDCCAG3 chr9 136405978 - Exonic hg38 LGG TCGA-DU-7014-01A 5 23 Out-of-frame Intra-chr q34.3 Oncogene Tumor suppressor gene q34.3 Seq+ 91626 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD50-CADPS RAD50 chr5 132575928 + CADPS chr3 62592748 - Exonic hg38 LGG TCGA-DU-7014-01A 3 4 In-Frame Inter-chr q31.1 Oncogene p14.2 Seq+ 91627 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBMS3-PLGRKT RBMS3 chr3 28576496 + PLGRKT chr9 5361888 - Exonic hg38 LGG TCGA-DU-7014-01A 1 9 5'UTR-CDS Inter-chr p24.1 Tumor suppressor gene p24.1 91628 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUDT3-DDR1 NUDT3 chr6 34341862 - DDR1 chr6 30888688 + Exonic hg38 LGG TCGA-DU-7015-01A 2 9 CDS-3'UTR Intra-chr p21.31 TK:DDR Seq+ 91629 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGKI-CSMD3 DGKI chr7 137846462 - CSMD3 chr8 112409032 - Exonic hg38 LGG TCGA-DU-7015-01A 2 6 Out-of-frame Inter-chr q33 q23.3 Oncogene Seq+ 91630 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAK1-CADM1 TRAK1 chr3 42087400 + CADM1 chr11 115178775 - Exonic hg38 LGG TCGA-DU-7015-01A 1 10 5'UTR-CDS Inter-chr p22.1 q23.3 Tumor suppressor gene Seq+ 91631 ChimerSeq TCGA FAWG TCGA_RNA-Seq JAM3-SEC13 JAM3 chr11 134140770 + SEC13 chr3 10305692 - Exonic hg38 LGG TCGA-DU-7015-01A 2 4 Out-of-frame Inter-chr q25 p25.3 91632 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFASC-ATP2B2 NFASC chr1 204988806 + ATP2B2 chr1 203739546 + Exonic hg38 LGG TCGA-DU-7292-01A 1000 1000 CDS-5'UTR Intra-chr q32.1 p25.3 91633 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEGF11-RPL4 MEGF11 chr15 65980778 - RPL4 chr15 66503529 - Exonic hg38 LGG TCGA-DU-7298-01A 4 5 5'UTR-CDS Intra-chr q22.31 q22.31 Seq+ 91634 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIK2-MEGF11 SIK2 chr11 111688162 + MEGF11 chr15 65982488 - Exonic hg38 LGG TCGA-DU-7298-01A 3 8 CDS-5'UTR Inter-chr q23.1 q22.31 Seq+ 91635 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM245-SLC44A1 TMEM245 chr9 109106508 - SLC44A1 chr9 105438281 + Exonic hg38 LGG TCGA-DU-7298-01A 1 7 Out-of-frame Intra-chr q31.3 q31.1 91636 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R1B-IDH2 PPP2R1B chr11 111742523 - IDH2 chr15 90091644 - Exonic hg38 LGG TCGA-DU-7298-01A 1 5 Out-of-frame Inter-chr q23.1 Tumor suppressor gene q26.1 Oncogene 91637 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHRSX-SYAP1 DHRSX chrY 2291502 - SYAP1 chrX 16735227 + Exonic hg38 LGG TCGA-DU-7299-01A 1 33 In-Frame Inter-chr p22.33 p22.2 Seq+ 91638 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPIDR-KCNB2 SPIDR chr8 47294030 + KCNB2 chr8 72567642 + Exonic hg38 LGG TCGA-DU-7299-01A 2 25 5'UTR-5'UTR Intra-chr q11.21 q21.11 Seq+ 91639 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCAM1-TTC12 NCAM1 chr11 112961664 + TTC12 chr11 113341837 + Exonic hg38 LGG TCGA-DU-7299-01A 1 3 Out-of-frame Intra-chr q23.2 q23.2 91640 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKX-CLCN4 PRKX chrX 3713088 - CLCN4 chrX 10158289 + Exonic hg38 LGG TCGA-DU-7299-01A 1 2 CDS-5'UTR Intra-chr p22.33 AGC:PKA p22.2 Seq+ 91641 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R2B-DPYSL3 PPP2R2B chr5 147055665 - DPYSL3 chr5 147424963 - Exonic hg38 LGG TCGA-DU-7299-01A 1 1 Out-of-frame Intra-chr q32 q32 Seq+ 91642 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMPD3-PRPS1 FRMPD3 chrX 107576459 + PRPS1 chrX 107639295 + Exonic hg38 LGG TCGA-DU-7301-01A 1000 1000 Out-of-frame Intra-chr q22.3 q22.3 91643 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD8-KIAA1211 CHD8 chr14 21456032 - KIAA1211 chr4 56179284 + Exonic hg38 LGG TCGA-DU-7302-01A 6 15 5'UTR-5'UTR Inter-chr q11.2 q12 Seq+ 91644 ChimerSeq TCGA FAWG TCGA_RNA-Seq RABGAP1L-DGKB RABGAP1L chr1 174221164 + DGKB chr7 14178151 - Exonic hg38 LGG TCGA-DU-7304-01A 6 25 In-Frame Inter-chr q25.1 p21.2 91645 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRZ1-MET PTPRZ1 chr7 121873557 + MET chr7 116699071 + Exonic hg38 LGG TCGA-DU-7304-01A 1 20 5'UTR-5'UTR Intra-chr q31.32 q31.2 TK:Met Oncogene Pub Seq+ 91646 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF12-FOLR1 TCF12 chr15 57134500 + FOLR1 chr11 72192166 + Exonic hg38 LGG TCGA-DU-7304-01A 2 9 5'UTR-5'UTR Inter-chr q21.3 Oncogene Transcription factor q13.4 91647 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC12-SLC38A3 CCDC12 chr3 46976637 - SLC38A3 chr3 50214149 + Exonic hg38 LGG TCGA-DU-7304-01A 3 2 CDS-5'UTR Intra-chr p21.31 p21.31 91648 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFS7-CNN2 NDUFS7 chr19 1383942 + CNN2 chr19 1031071 + Exonic hg38 LGG TCGA-DU-7306-01A 34 4 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 91649 ChimerSeq TCGA FAWG TCGA_RNA-Seq APLP1-CLU APLP1 chr19 35879497 + CLU chr8 27605168 - Exonic hg38 LGG TCGA-DU-8158-01A 1000 1000 Out-of-frame Inter-chr q13.12 p21.1 Tumor suppressor gene 91650 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP1-IGSF21 AGAP1 chr2 235750488 + IGSF21 chr1 18227898 + Exonic hg38 LGG TCGA-DU-8161-01A 13 51 In-Frame Inter-chr q37.2 p36.13 Seq+ 91651 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP1A2-CLU ATP1A2 chr1 160121251 + CLU chr8 27606524 - Exonic hg38 LGG TCGA-DU-8161-01A 2 14 In-Frame Inter-chr q23.2 p21.1 Tumor suppressor gene Seq+ 91652 ChimerSeq TCGA FAWG TCGA_RNA-Seq PER3-CELA2A PER3 chr1 7785586 + CELA2A chr1 15465999 + Exonic hg38 LGG TCGA-DU-8161-01A 3 6 In-Frame Intra-chr p36.23 p36.21 Seq+ 91653 ChimerSeq TCGA FAWG TCGA_RNA-Seq PER3-CELA2B PER3 chr1 7785586 + CELA2B chr1 15465999 + Exonic hg38 LGG TCGA-DU-8161-01A 3 6 5'UTR-5'UTR Intra-chr p36.23 p36.21 Seq+ 91654 ChimerSeq TCGA FAWG TCGA_RNA-Seq LINC-SEPT14 LINC chr7 130984053 - SEPT14 chr7 55819223 - Exonic hg38 LGG TCGA-DU-8162-01A 1 11 Out-of-frame Intra-chr p11.2 91655 ChimerSeq TCGA FAWG TCGA_RNA-Seq AUTS2-MKLN1 AUTS2 chr7 70781756 + MKLN1 chr7 131375424 + Exonic hg38 LGG TCGA-DU-8162-01A 1 6 Out-of-frame Intra-chr q11.22 q32.3 91656 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGFN1-KANK1 IGFN1 chr1 201222827 + KANK1 chr9 734748 + Exonic hg38 LGG TCGA-DU-8163-01A 10 46 Out-of-frame Inter-chr q32.1 p24.3 Tumor suppressor gene Seq+ 91657 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRB1-IGFN1 CRB1 chr1 197268482 + IGFN1 chr1 201194154 + Exonic hg38 LGG TCGA-DU-8163-01A 1 27 In-Frame Intra-chr q31.3 q32.1 Seq+ 91658 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4B-CHAF1A KDM4B chr19 5082504 + CHAF1A chr19 4418020 + Exonic hg38 LGG TCGA-DU-8163-01A 1 14 In-Frame Intra-chr p13.3 p13.3 Seq+ 91659 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF21B-ANP32B KIF21B chr1 201023343 - ANP32B chr9 97994631 + Exonic hg38 LGG TCGA-DU-8163-01A 1 1 Out-of-frame Inter-chr q32.1 q22.33 91660 ChimerSeq TCGA FAWG TCGA_RNA-Seq ORAI2-CUX1 ORAI2 chr7 102433661 + CUX1 chr7 102028098 + Exonic hg38 LGG TCGA-DU-8165-01A 2 4 5'UTR-CDS Intra-chr q22.1 q22.1 Tumor suppressor gene Transcription factor Seq+ 91661 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOVA2-LEUTX NOVA2 chr19 45961010 - LEUTX chr19 39784527 + Exonic hg38 LGG TCGA-DU-8166-01A 8 30 CDS-3'UTR Intra-chr q13.32 Transcription factor Seq+ 91662 ChimerSeq TCGA FAWG TCGA_RNA-Seq RERE-VAMP3 RERE chr1 8422727 - VAMP3 chr1 7773442 + Exonic hg38 LGG TCGA-DU-8166-01A 7 25 Out-of-frame Intra-chr p36.23 p36.23 Seq+ 91663 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPON1-SIRT3 SPON1 chr11 14041654 + SIRT3 chr11 233215 - Exonic hg38 LGG TCGA-DU-8166-01A 5 30 In-Frame Intra-chr p15.2 p15.5 Tumor suppressor gene Seq+ 91664 ChimerSeq TCGA FAWG TCGA_RNA-Seq CALM3-CCDC9 CALM3 chr19 46601437 + CCDC9 chr19 47258330 + Exonic hg38 LGG TCGA-DU-8166-01A 7 21 5'UTR-5'UTR Intra-chr q13.32 q13.32 Seq+ 91665 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYMPK-ELSPBP1 SYMPK chr19 45817959 - ELSPBP1 chr19 48008651 + Exonic hg38 LGG TCGA-DU-8166-01A 1 3 CDS-5'UTR Intra-chr q13.32 q13.33 Seq+ 91666 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKLE2-NCOR2 ANKLE2 chr12 132750643 - NCOR2 chr12 124327633 - Exonic hg38 LGG TCGA-DU-8167-01A 7 11 In-Frame Intra-chr q24.33 q24.31 Seq+ 91667 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOR2-TMEM132D NCOR2 chr12 124400501 - TMEM132D chr12 129531205 - Exonic hg38 LGG TCGA-DU-8167-01A 5 7 Out-of-frame Intra-chr q24.31 q24.33 Seq+ 91668 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM132D-GALNT9 TMEM132D chr12 129531059 - GALNT9 chr12 132248027 - Exonic hg38 LGG TCGA-DU-8167-01A 1 10 In-Frame Intra-chr q24.33 q24.33 Seq+ 91669 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC94-EBI3 CCDC94 chr19 4267774 + EBI3 chr19 4231191 + Exonic hg38 LGG TCGA-DU-8167-01A 1 8 Out-of-frame Intra-chr p13.3 p13.3 91670 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC3-KCNJ6 TTC3 chr21 37124742 + KCNJ6 chr21 37625484 - Exonic hg38 LGG TCGA-DU-8167-01A 1000 1000 Out-of-frame Intra-chr q22.13 q22.13 91671 ChimerSeq TCGA FAWG TCGA_RNA-Seq NKD1-NOD2 NKD1 chr16 50632407 + NOD2 chr16 50707854 + Exonic hg38 LGG TCGA-DU-8168-01A 1000 1000 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 91672 ChimerSeq TCGA FAWG TCGA_RNA-Seq KNTC1-WASHC3 KNTC1 chr12 122551696 + WASHC3 chr12 102039978 - Exonic hg38 LGG TCGA-DU-A5TP-01A 2 7 In-Frame Intra-chr q24.31 q23.2 91673 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPOP-PRDM16 SPOP chr17 49677933 - PRDM16 chr1 3385152 + Exonic hg38 LGG TCGA-DU-A5TP-01A 1 6 5'UTR-CDS Inter-chr q21.33 Oncogene Tumor suppressor gene p36.32 Transcription factor Seq+ 91674 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAPGEF1-MED27 RAPGEF1 chr9 131739770 - MED27 chr9 131863140 - Exonic hg38 LGG TCGA-DU-A5TT-01A 1 3 Out-of-frame Intra-chr q34.13 q34.13 Seq+ 91675 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNC79-BRF1 UNC79 chr14 93603418 + BRF1 chr14 105286376 - Exonic hg38 LGG TCGA-DU-A5TU-01A 2 9 3'UTR-CDS Intra-chr q32.33 Tumor suppressor gene Seq+ 91676 ChimerSeq TCGA FAWG TCGA_RNA-Seq C3orf70-CLDN11 C3orf70 chr3 185152628 - CLDN11 chr3 170859983 + Exonic hg38 LGG TCGA-DU-A5TW-01A 2 4 CDS-3'UTR Intra-chr q27.2 q26.2 Seq+ 91677 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D15-BMPER TBC1D15 chr12 71873003 + BMPER chr7 33937289 + Exonic hg38 LGG TCGA-DU-A5TY-01A 29 252 In-Frame Inter-chr q21.1 p14.3 Seq+ 91678 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSRB3-JAZF1 MSRB3 chr12 65328603 + JAZF1 chr7 27840867 - Exonic hg38 LGG TCGA-DU-A5TY-01A 32 86 Out-of-frame Inter-chr q14.3 p15.1 Transcription factor Seq+ 91679 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC61G-IKZF1 SEC61G chr7 54757495 - IKZF1 chr7 50368006 + Exonic hg38 LGG TCGA-DU-A5TY-01A 10 35 In-Frame Intra-chr p11.2 p12.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 91680 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOXA3-KIAA0895 HOXA3 chr7 27110726 - KIAA0895 chr7 36390027 - Exonic hg38 LGG TCGA-DU-A5TY-01A 9 32 Out-of-frame Intra-chr p15.2 Transcription factor p14.2 Seq+ 91681 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCYAP1R1-DFNA5 ADCYAP1R1 chr7 31092735 + DFNA5 chr7 24710388 - Exonic hg38 LGG TCGA-DU-A5TY-01A 6 28 Out-of-frame Intra-chr p14.3 p15.3 Tumor suppressor gene Seq+ 91682 ChimerSeq TCGA FAWG TCGA_RNA-Seq JAZF1-SNX13 JAZF1 chr7 28180463 - SNX13 chr7 17891635 - Exonic hg38 LGG TCGA-DU-A5TY-01A 7 19 Out-of-frame Intra-chr p15.1 Transcription factor p21.1 Seq+ 91683 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAND1-DPY19L2P3 CAND1 chr12 67269785 + DPY19L2P3 chr7 29742147 + Exonic hg38 LGG TCGA-DU-A5TY-01A 4 20 5'UTR-5'UTR Inter-chr q14.3 p14.3 91684 ChimerSeq TCGA FAWG TCGA_RNA-Seq AUTS2-TBC1D30 AUTS2 chr7 70134571 + TBC1D30 chr12 64827835 + Exonic hg38 LGG TCGA-DU-A5TY-01A 3 11 Out-of-frame Inter-chr q11.22 q14.3 Seq+ 91685 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRK2-GXYLT1 LRRK2 chr12 40225640 + GXYLT1 chr12 42119171 - Exonic hg38 LGG TCGA-DU-A5TY-01A 2 15 Out-of-frame Intra-chr q12 TKL:LRRK q12 Seq+ 91686 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT14-UPP1 SEPT14 chr7 55861943 - UPP1 chr7 48101824 + Exonic hg38 LGG TCGA-DU-A5TY-01A 1 14 Out-of-frame Intra-chr p11.2 p12.3 Seq+ 91687 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRR-VWC2 PTPRR chr12 70656704 - VWC2 chr7 49912034 + Exonic hg38 LGG TCGA-DU-A5TY-01A 3 4 Out-of-frame Inter-chr q15 p12.2 Seq+ 91688 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASSF3-SNX10 RASSF3 chr12 64610743 + SNX10 chr7 26346420 + Exonic hg38 LGG TCGA-DU-A5TY-01A 3 4 5'UTR-5'UTR Inter-chr q14.2 Tumor suppressor gene p15.2 Seq+ 91689 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNTN1-PDZRN4 CNTN1 chr12 40692592 + PDZRN4 chr12 41506456 + Exonic hg38 LGG TCGA-DU-A5TY-01A 3 3 5'UTR-CDS Intra-chr q12 q12 91690 ChimerSeq TCGA FAWG TCGA_RNA-Seq AVL9-TSPAN31 AVL9 chr7 32495802 + TSPAN31 chr12 57745745 + Exonic hg38 LGG TCGA-DU-A5TY-01A 2 6 In-Frame Inter-chr p14.3 q14.1 Seq+ 91691 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN31-LANCL2 TSPAN31 chr12 57745217 + LANCL2 chr7 55428375 + Exonic hg38 LGG TCGA-DU-A5TY-01A 1 9 In-Frame Inter-chr q14.1 p11.2 91692 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA8-PRR15 PLEKHA8 chr7 30055342 + PRR15 chr7 29566185 + Exonic hg38 LGG TCGA-DU-A5TY-01A 1 3 CDS-5'UTR Intra-chr p14.3 p14.3 91693 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMF1-CCDC154 LMF1 chr16 910931 - CCDC154 chr16 1439126 - Exonic hg38 LGG TCGA-DU-A6S2-01A 1 5 In-Frame Intra-chr p13.3 p13.3 Tumor suppressor gene Seq+ 91694 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF37A-MINDY3 ZNF37A chr10 38095804 + MINDY3 chr10 15796172 - Exonic hg38 LGG TCGA-DU-A6S7-01A 3 3 5'UTR-CDS Intra-chr p11.1 Transcription factor p13 91695 ChimerSeq TCGA FAWG TCGA_RNA-Seq SQSTM1-NTRK2 SQSTM1 chr5 179825226 + NTRK2 chr9 84934162 + Exonic hg38 LGG TCGA-DU-A76L-01A 13 27 3'UTR-CDS Inter-chr q35.3 q21.33 Oncogene Seq+ 91696 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK1D-RNF213 CSNK1D chr17 82273306 - RNF213 chr17 80380831 + Exonic hg38 LGG TCGA-DU-A76R-01A 2 2 Out-of-frame Intra-chr q25.3 q25.3 Oncogene 91697 ChimerSeq TCGA FAWG TCGA_RNA-Seq PICALM-PPME1 PICALM chr11 86068651 - PPME1 chr11 74203728 + Exonic hg38 LGG TCGA-DU-A7T6-01A 7 33 Out-of-frame Intra-chr q14.2 q13.4 Seq+ 91698 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPRIN1-C11orf84 CAPRIN1 chr11 34092056 + C11orf84 chr11 63817805 + Exonic hg38 LGG TCGA-DU-A7T6-01A 8 25 Out-of-frame Intra-chr p13 q13.1 Seq+ 91699 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2A-IGHMBP2 KMT2A chr11 118512025 + IGHMBP2 chr11 68917736 + Exonic hg38 LGG TCGA-DU-A7T6-01A 2 6 Out-of-frame Intra-chr q23.3 Oncogene Transcription factor q13.3 91700 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB30-CPT1A RAB30 chr11 82987587 - CPT1A chr11 68815487 - Exonic hg38 LGG TCGA-DU-A7T6-01A 2 2 CDS-5'UTR Intra-chr q14.1 q13.3 91701 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGPAT3-PRY AGPAT3 chr21 43904019 + PRY chrY 22504209 + Exonic hg38 LGG TCGA-DU-A7T8-01A 2 5 5'UTR-CDS Inter-chr q22.3 q11.223 Seq+ 91702 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITPR1-BHLHE40 ITPR1 chr3 4663206 + BHLHE40 chr3 4981392 + Exonic hg38 LGG TCGA-DU-A7TA-01A 6 15 In-Frame Intra-chr p26.1 p26.1 Transcription factor Seq+ 91703 ChimerSeq TCGA FAWG TCGA_RNA-Seq AZIN1-ITPR1 AZIN1 chr8 102858013 - ITPR1 chr3 4627763 + Exonic hg38 LGG TCGA-DU-A7TA-01A 2 8 5'UTR-CDS Inter-chr q22.3 p26.1 Seq+ 91704 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAST4-UBE2V2 MAST4 chr5 66959294 + UBE2V2 chr8 48043033 + Exonic hg38 LGG TCGA-DU-A7TA-01A 1 3 Out-of-frame Inter-chr q12.3 AGC:MAST q11.21 91705 ChimerSeq TCGA FAWG TCGA_RNA-Seq MB21D2-CEP19 MB21D2 chr3 192917630 - CEP19 chr3 196707912 - Exonic hg38 LGG TCGA-DU-A7TA-01A 1 3 In-Frame Intra-chr q29 q29 Seq+ 91706 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMC3-C15orf40 TMC3 chr15 81338655 - C15orf40 chr15 82992048 - Exonic hg38 LGG TCGA-DU-A7TC-01A 9 17 CDS-3'UTR Intra-chr q25.1 q25.2 Seq+ 91707 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2AK4-PKM EIF2AK4 chr15 40009730 + PKM chr15 72210478 - Exonic hg38 LGG TCGA-DU-A7TC-01A 5 18 In-Frame Intra-chr q15.1 q23 Seq+ 91708 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53BP1-DAPK2 TP53BP1 chr15 43479397 - DAPK2 chr15 63971561 - Exonic hg38 LGG TCGA-DU-A7TC-01A 8 5 In-Frame Intra-chr q15.3 Tumor suppressor gene q22.31 CAMK:DAPK Tumor suppressor gene Seq+ 91709 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP6V1B2-KHDRBS2 ATP6V1B2 chr8 20212905 + KHDRBS2 chr6 61901371 - Exonic hg38 LGG TCGA-DU-A7TC-01A 6 10 In-Frame Inter-chr p21.3 q11.1 Seq+ 91710 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE3A-MYO5C UBE3A chr15 25420656 - MYO5C chr15 52208643 - Exonic hg38 LGG TCGA-DU-A7TC-01A 3 18 5'UTR-CDS Intra-chr q11.2 q21.2 Seq+ 91711 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS39-LYSMD2 VPS39 chr15 42199896 - LYSMD2 chr15 51724991 - Exonic hg38 LGG TCGA-DU-A7TC-01A 3 16 Out-of-frame Intra-chr q15.1 q21.2 Seq+ 91712 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMOD2-C15orf59 TMOD2 chr15 51782828 + C15orf59 chr15 73740642 - Exonic hg38 LGG TCGA-DU-A7TC-01A 3 5 Out-of-frame Intra-chr q21.2 q24.1 Seq+ 91713 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMBOX1-CLU HMBOX1 chr8 28890678 + CLU chr8 27610600 - Exonic hg38 LGG TCGA-DU-A7TC-01A 2 6 5'UTR-5'UTR Intra-chr p21.1 Transcription factor p21.1 Tumor suppressor gene Seq+ 91714 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF12-TMC3 TCF12 chr15 57263274 + TMC3 chr15 81368328 - Exonic hg38 LGG TCGA-DU-A7TC-01A 1 10 In-Frame Intra-chr q21.3 Oncogene Transcription factor q25.1 91715 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR20-LGALS2 WDR20 chr14 102140172 + LGALS2 chr22 37571931 - Exonic hg38 LGG TCGA-DU-A7TD-01A 5 54 In-Frame Inter-chr q32.31 q13.1 Seq+ 91716 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM222B-ALDH6A1 FAM222B chr17 28834293 - ALDH6A1 chr14 74075017 - Exonic hg38 LGG TCGA-DU-A7TD-01A 3 14 5'UTR-5'UTR Inter-chr q11.2 q24.3 Seq+ 91717 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFASC-ATP2B2 NFASC chr1 204828782 + ATP2B2 chr1 203698157 + Exonic hg38 LGG TCGA-DU-A7TD-01A 1000 1000 5'UTR-5'UTR Intra-chr q32.1 p25.3 91718 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTGES3-ITPR2 PTGES3 chr12 56672740 - ITPR2 chr12 26550355 - Exonic hg38 LGG TCGA-DU-A7TI-01A 1 3 Out-of-frame Intra-chr q13.3 p11.23 91719 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHOC2-EDRF1 SHOC2 chr10 110965061 + EDRF1 chr10 125763301 + Exonic hg38 LGG TCGA-DU-A7TI-01A 1 2 Out-of-frame Intra-chr q25.2 q26.2 91720 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFTPH-KIAA1841 AFTPH chr2 64524612 + KIAA1841 chr2 61115979 + Exonic hg38 LGG TCGA-DU-A7TJ-01A 37 101 5'UTR-CDS Intra-chr p14 p15 Seq+ 91721 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPLL-SERTAD2 HNRNPLL chr2 38591530 - SERTAD2 chr2 64636875 - Exonic hg38 LGG TCGA-DU-A7TJ-01A 8 17 CDS-5'UTR Intra-chr p22.1 p14 Seq+ 91722 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMD4A-CGRRF1 SAMD4A chr14 54568112 + CGRRF1 chr14 54537722 + Exonic hg38 LGG TCGA-DU-A7TJ-01A 8 13 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 91723 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEX261-AAK1 TEX261 chr2 70989749 - AAK1 chr2 69556978 - Exonic hg38 LGG TCGA-DU-A7TJ-01A 1 10 Out-of-frame Intra-chr p13.3 p13.3 Other:NAK 91724 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUMA1-FOLR1 NUMA1 chr11 72080458 - FOLR1 chr11 72195271 + Exonic hg38 LGG TCGA-E1-5302-01A 1 34 5'UTR-CDS Intra-chr q13.4 Oncogene q13.4 Seq+ 91725 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHH2-ZBTB1 PLEKHH2 chr2 43710575 + ZBTB1 chr14 64521487 + Exonic hg38 LGG TCGA-E1-5302-01A 1 1 CDS-5'UTR Inter-chr p21 q23.3 Transcription factor 91726 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13L-MYBPC1 MED13L chr12 116006306 - MYBPC1 chr12 101667732 + Exonic hg38 LGG TCGA-E1-5303-01A 7 49 In-Frame Intra-chr q24.21 q23.2 Seq+ 91727 ChimerSeq TCGA FAWG TCGA_RNA-Seq PXN-MYBPC1 PXN chr12 120265617 - MYBPC1 chr12 101648045 + Exonic hg38 LGG TCGA-E1-5303-01A 5 17 In-Frame Intra-chr q24.23 q23.2 Seq+ 91728 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARMC8-CLDN18 ARMC8 chr3 138187599 + CLDN18 chr3 138023658 + Exonic hg38 LGG TCGA-E1-5303-01A 5 7 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 91729 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYBPC1-PXN MYBPC1 chr12 101663560 + PXN chr12 120224377 - Exonic hg38 LGG TCGA-E1-5303-01A 2 8 In-Frame Intra-chr q23.2 q24.23 Seq+ 91730 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP6-NINJ2 LRP6 chr12 12179810 - NINJ2 chr12 566178 - Exonic hg38 LGG TCGA-E1-5304-01A 92 448 5'UTR-5'UTR Intra-chr p13.33 Seq+ 91731 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNJ10-CISD2 KCNJ10 chr1 160070022 - CISD2 chr4 102885216 + Exonic hg38 LGG TCGA-E1-5304-01A 32 320 5'UTR-CDS Inter-chr q23.2 q24 Seq+ 91732 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD6-ZDHHC14 ANKRD6 chr6 89567096 + ZDHHC14 chr6 157628349 + Exonic hg38 LGG TCGA-E1-5304-01A 27 145 Out-of-frame Intra-chr q15 q25.3 Seq+ 91733 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1B-PREP ARID1B chr6 156829421 + PREP chr6 105397927 - Exonic hg38 LGG TCGA-E1-5304-01A 14 99 In-Frame Intra-chr q25.3 Oncogene q21 Seq+ 91734 ChimerSeq TCGA FAWG TCGA_RNA-Seq FYTTD1-ALDH1A3 FYTTD1 chr3 197778464 + ALDH1A3 chr15 100887572 + Exonic hg38 LGG TCGA-E1-5304-01A 15 47 In-Frame Inter-chr q29 q26.3 Seq+ 91735 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCA2-TRIM14 ABCA2 chr9 137028075 - TRIM14 chr9 98100164 - Exonic hg38 LGG TCGA-E1-5304-01A 15 44 In-Frame Intra-chr q34.3 q22.33 Seq+ 91736 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K4-METTL24 MAP3K4 chr6 161049979 + METTL24 chr6 110315481 - Exonic hg38 LGG TCGA-E1-5304-01A 10 41 In-Frame Intra-chr q26 STE:STE11 Tumor suppressor gene q21 Seq+ 91737 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCYT1B-SIAH1 PCYT1B chrX 24575130 - SIAH1 chr16 48362430 - Exonic hg38 LGG TCGA-E1-5304-01A 5 48 Out-of-frame Inter-chr p22.11 q12.1 Tumor suppressor gene Seq+ 91738 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF790-RHPN2 ZNF790 chr19 36838337 - RHPN2 chr19 33044364 - Exonic hg38 LGG TCGA-E1-5304-01A 8 34 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.11 Seq+ 91739 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCAM2-CYP4F29P NCAM2 chr21 20998618 + CYP4F29P chr21 13846141 - Exonic hg38 LGG TCGA-E1-5304-01A 2 49 CDS-3'UTR Intra-chr q21.1 Tumor suppressor gene q11.2 Seq+ 91740 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGCS1-OXCT1 HMGCS1 chr5 43307766 - OXCT1 chr5 41862750 - Exonic hg38 LGG TCGA-E1-5304-01A 3 20 5'UTR-CDS Intra-chr p12 p13.1 Seq+ 91741 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIMKLB-ITFG2 RIMKLB chr12 8700614 + ITFG2 chr12 2817223 + Exonic hg38 LGG TCGA-E1-5304-01A 3 18 5'UTR-5'UTR Intra-chr p13.31 p13.33 Seq+ 91742 ChimerSeq TCGA FAWG TCGA_RNA-Seq CKS2-PCSK5 CKS2 chr9 89315297 + PCSK5 chr9 76174986 + Exonic hg38 LGG TCGA-E1-5304-01A 2 20 In-Frame Intra-chr q22.2 q21.13 Seq+ 91743 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASCC3-SERINC1 ASCC3 chr6 100715462 - SERINC1 chr6 122447004 - Exonic hg38 LGG TCGA-E1-5304-01A 5 7 Out-of-frame Intra-chr q16.3 q22.31 Seq+ 91744 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPZ1-PPP1R1A COPZ1 chr12 54325181 + PPP1R1A chr12 54581050 - Exonic hg38 LGG TCGA-E1-5304-01A 5 3 Out-of-frame Intra-chr q13.13 q13.2 Seq+ 91745 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX58-CHRM3 DDX58 chr9 32466290 - CHRM3 chr1 239886089 + Exonic hg38 LGG TCGA-E1-5304-01A 3 6 CDS-5'UTR Inter-chr p21.1 Tumor suppressor gene q43 Seq+ 91746 ChimerSeq TCGA FAWG TCGA_RNA-Seq VCP-C9orf131 VCP chr9 35072337 - C9orf131 chr9 35042861 + Exonic hg38 LGG TCGA-E1-5304-01A 3 3 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 91747 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIMM23-PRKG1 TIMM23 chr10 45988847 + PRKG1 chr10 51804585 + Exonic hg38 LGG TCGA-E1-5304-01A 2 6 In-Frame Intra-chr q11.22 q11.23 Seq+ 91748 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPV17L-XPO6 MPV17L chr16 15396207 + XPO6 chr16 28113050 - Exonic hg38 LGG TCGA-E1-5304-01A 2 5 3'UTR-CDS Intra-chr p13.11 p12.1 Seq+ 91749 ChimerSeq TCGA FAWG TCGA_RNA-Seq LACE1-ARMC2 LACE1 chr6 108477292 + ARMC2 chr6 108973357 + Exonic hg38 LGG TCGA-E1-5304-01A 1 7 Out-of-frame Intra-chr q21 91750 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHKB-ERBIN PHKB chr16 47463993 + ERBIN chr5 66012049 + Exonic hg38 LGG TCGA-E1-5304-01A 1 6 In-Frame Inter-chr q12.1 q12.3 91751 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARK2-AKAP12 PARK2 chr6 162727662 - AKAP12 chr6 151305747 + Exonic hg38 LGG TCGA-E1-5304-01A 1 4 Out-of-frame Intra-chr Tumor suppressor gene q25.1 Tumor suppressor gene 91752 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSE-PKIB DSE chr6 116258967 + PKIB chr6 122585921 + Exonic hg38 LGG TCGA-E1-5304-01A 1 3 5'UTR-5'UTR Intra-chr q22.1 q22.31 91753 ChimerSeq TCGA FAWG TCGA_RNA-Seq WBP1L-ARL3 WBP1L chr10 102744143 + ARL3 chr10 102705489 - Exonic hg38 LGG TCGA-E1-5304-01A 1 2 In-Frame Intra-chr q24.32 q24.32 Seq+ 91754 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF22-ETV1 ZNF22 chr10 45000978 + ETV1 chr7 13909700 - Exonic hg38 LGG TCGA-E1-5304-01A 1 1 5'UTR-CDS Inter-chr q11.21 Transcription factor p21.2 Oncogene Transcription factor 91755 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNC3-ZNF530 KCNC3 chr19 50333469 - ZNF530 chr19 57612503 + Exonic hg38 LGG TCGA-E1-5305-01A 2 14 3'UTR-5'UTR Intra-chr q13.33 q13.43 Transcription factor Seq+ 91756 ChimerSeq TCGA FAWG TCGA_RNA-Seq CENPO-UBXN2A CENPO chr2 24793965 + UBXN2A chr2 23958301 + Exonic hg38 LGG TCGA-E1-5318-01A 1 4 CDS-5'UTR Intra-chr p23.3 p23.3 Seq+ 91757 ChimerSeq TCGA FAWG TCGA_RNA-Seq APOL2-RAB12 APOL2 chr22 36239441 - RAB12 chr18 8633189 + Exonic hg38 LGG TCGA-E1-5318-01A 1 1 5'UTR-CDS Inter-chr q12.3 p11.22 91758 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLUL-MBP GLUL chr1 182387131 - MBP chr18 77017055 - Exonic hg38 LGG TCGA-E1-5319-01A 1 7 In-Frame Inter-chr q25.3 q23 91759 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSFM-CYP27B1 TSFM chr12 57787162 + CYP27B1 chr12 57766197 - Exonic hg38 LGG TCGA-E1-A7YD-01A 110 362 In-Frame Intra-chr q14.1 q14.1 Seq+ 91760 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNS1-SPTBN1 TNS1 chr2 217814912 - SPTBN1 chr2 54599092 + Exonic hg38 LGG TCGA-E1-A7YD-01A 11 10 In-Frame Intra-chr q35 p16.2 Tumor suppressor gene Seq+ 91761 ChimerSeq TCGA FAWG TCGA_RNA-Seq ECE1-EIF4G3 ECE1 chr1 21345376 - EIF4G3 chr1 20817538 - Exonic hg38 LGG TCGA-E1-A7YD-01A 10 12 In-Frame Intra-chr p36.12 p36.12 Seq+ 91762 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBED6-FIP1L1 ZBED6 chr1 203818689 + FIP1L1 chr4 53425872 + Exonic hg38 LGG TCGA-E1-A7YD-01A 5 12 3'UTR-CDS Inter-chr q32.1 Transcription factor q12 91763 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H11A-FIP1L1 ZC3H11A chr1 203818689 + FIP1L1 chr4 53425872 + Exonic hg38 LGG TCGA-E1-A7YD-01A 5 12 Out-of-frame Inter-chr q32.1 q12 Seq+ 91764 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAICS-PDGFRA PAICS chr4 56436328 + PDGFRA chr4 54270633 + Exonic hg38 LGG TCGA-E1-A7YD-01A 1 4 Out-of-frame Intra-chr q12 q12 Oncogene Seq+ 91765 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR3B-TCP11L2 POLR3B chr12 106410960 + TCP11L2 chr12 106346286 + Exonic hg38 LGG TCGA-E1-A7YE-01A 1 3 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 91766 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-PCBD1 CCDC6 chr10 59906122 - PCBD1 chr10 70885929 - Exonic hg38 LGG TCGA-E1-A7YH-01A 2 7 In-Frame Intra-chr q21.2 q22.1 Seq+ 91767 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYMPK-LSM4 SYMPK chr19 45863058 - LSM4 chr19 18316065 - Exonic hg38 LGG TCGA-E1-A7YH-01A 2 4 5'UTR-CDS Intra-chr q13.32 p13.11 Seq+ 91768 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDGFRA-FIP1L1 PDGFRA chr4 54290554 + FIP1L1 chr4 53444048 + Exonic hg38 LGG TCGA-E1-A7YI-01A 2265 8541 In-Frame Intra-chr q12 Oncogene q12 KB Seq+ 91769 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1551-MLIP KIAA1551 chr12 31960871 + MLIP chr6 54230714 + Exonic hg38 LGG TCGA-E1-A7YI-01A 20 140 Out-of-frame Inter-chr p11.21 p12.1 Seq+ 91770 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUPT3H-TDRG1 SUPT3H chr6 45365201 - TDRG1 chr6 40379282 + Exonic hg38 LGG TCGA-E1-A7YI-01A 38 67 5'UTR-5'UTR Intra-chr p21.1 p21.2 Tumor suppressor gene Seq+ 91771 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGFR-C7orf72 EGFR chr7 55200413 + C7orf72 chr7 50104314 + Exonic hg38 LGG TCGA-E1-A7YJ-01A 6 13 Out-of-frame Intra-chr p11.2 TK:EGFR Oncogene p12.2 Seq+ 91772 ChimerSeq TCGA FAWG TCGA_RNA-Seq PI4KA-VPREB3 PI4KA chr22 20793193 - VPREB3 chr22 23753198 - Exonic hg38 LGG TCGA-E1-A7YJ-01A 1 2 Out-of-frame Intra-chr q11.21 q11.23 91773 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF583-CCDC106 ZNF583 chr19 56414440 + CCDC106 chr19 55651283 + Exonic hg38 LGG TCGA-E1-A7YL-01A 198 315 In-Frame Intra-chr q13.43 Transcription factor q13.42 Seq+ 91774 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZSCAN18-ATP9B ZSCAN18 chr19 58098174 - ATP9B chr18 79303604 + Exonic hg38 LGG TCGA-E1-A7YL-01A 39 42 5'UTR-5'UTR Inter-chr q13.43 Transcription factor Seq+ 91775 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF329-EPG5 ZNF329 chr19 58150752 - EPG5 chr18 45952643 - Exonic hg38 LGG TCGA-E1-A7YL-01A 20 9 5'UTR-CDS Inter-chr q13.43 Transcription factor q21.1 Seq+ 91776 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRDC-VPS53 NRDC chr1 51792377 - VPS53 chr17 537176 - Exonic hg38 LGG TCGA-E1-A7YL-01A 11 36 CDS-5'UTR Inter-chr p32.3 Tumor suppressor gene 91777 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZSCAN18-ZNF837 ZSCAN18 chr19 58118348 - ZNF837 chr19 58369928 - Exonic hg38 LGG TCGA-E1-A7YL-01A 16 8 CDS-5'UTR Intra-chr q13.43 Transcription factor q13.43 Transcription factor Seq+ 91778 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF460-HSPD1 ZNF460 chr19 57280836 + HSPD1 chr2 197498850 - Exonic hg38 LGG TCGA-E1-A7YL-01A 6 24 CDS-5'UTR Inter-chr q13.43 Transcription factor q33.1 Tumor suppressor gene Seq+ 91779 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF165-LAIR2 RNF165 chr18 46334335 + LAIR2 chr19 54503700 + Exonic hg38 LGG TCGA-E1-A7YL-01A 4 11 CDS-3'UTR Inter-chr q21.1 Seq+ 91780 ChimerSeq TCGA FAWG TCGA_RNA-Seq RYR3-BUB1B RYR3 chr15 33473538 + BUB1B chr15 40165053 + Exonic hg38 LGG TCGA-E1-A7YL-01A 4 7 Out-of-frame Intra-chr q13.3 q15.1 Oncogene Seq+ 91781 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF460-SYT4 ZNF460 chr19 57280124 + SYT4 chr18 43274394 - Exonic hg38 LGG TCGA-E1-A7YL-01A 2 13 5'UTR-CDS Inter-chr q13.43 Transcription factor q12.3 Seq+ 91782 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK4-AVIL CDK4 chr12 57750923 - AVIL chr12 57799920 - Exonic hg38 LGG TCGA-E1-A7YL-01A 1 2 In-Frame Intra-chr q14.1 CMGC:CDK Oncogene q14.1 91783 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDGFRA-FIP1L1 PDGFRA chr4 54290554 + FIP1L1 chr4 53444048 + Exonic hg38 LGG TCGA-E1-A7YM-01A 1 5 In-Frame Intra-chr q12 Oncogene q12 KB Seq+ 91784 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAD1-LIPF ATAD1 chr10 87790310 - LIPF chr10 88667287 + Exonic hg38 LGG TCGA-E1-A7YN-01A 10 31 In-Frame Intra-chr q23.31 Seq+ 91785 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIPN-MINPP1 LIPN chr10 88770991 + MINPP1 chr10 87552082 + Exonic hg38 LGG TCGA-E1-A7YN-01A 2 8 Out-of-frame Intra-chr q23.31 q23.2 Seq+ 91786 ChimerSeq TCGA FAWG TCGA_RNA-Seq LANCL2-TTC3 LANCL2 chr7 55366229 + TTC3 chr21 37172595 + Exonic hg38 LGG TCGA-E1-A7YQ-01A 1 2 In-Frame Inter-chr p11.2 q22.13 91787 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELP6-AS2 ELP6 chr3 47510184 - AS2 chr3 29615232 - Exonic hg38 LGG TCGA-E1-A7YU-01A 8 23 Out-of-frame Intra-chr p21.31 91788 ChimerSeq TCGA FAWG TCGA_RNA-Seq HKR1-BLVRB HKR1 chr19 37324265 + BLVRB chr19 40458545 - Exonic hg38 LGG TCGA-E1-A7YU-01A 7 23 Out-of-frame Intra-chr q13.12 Transcription factor q13.2 Seq+ 91789 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBP1-MAP4 UBP1 chr3 33425590 - MAP4 chr3 47998879 - Exonic hg38 LGG TCGA-E1-A7YU-01A 2 4 CDS-5'UTR Intra-chr p22.3 Transcription factor p21.31 Seq+ 91790 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF5A-ATP23 KIF5A chr12 57550400 + ATP23 chr12 57945628 + Exonic hg38 LGG TCGA-E1-A7YV-01A 2 6 CDS-5'UTR Intra-chr q13.3 91791 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARS-OS9 MARS chr12 57500522 + OS9 chr12 57715760 + Exonic hg38 LGG TCGA-E1-A7YV-01A 2 2 In-Frame Intra-chr q13.3 q13.3 91792 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYT1-ST8SIA1 MYT1 chr20 64227971 + ST8SIA1 chr12 22354783 - Exonic hg38 LGG TCGA-E1-A7YW-01A 5 10 3'UTR-5'UTR Inter-chr Other:WEE Transcription factor p12.1 Seq+ 91793 ChimerSeq TCGA FAWG TCGA_RNA-Seq EI24-FEZ1 EI24 chr11 125572569 + FEZ1 chr11 125489822 - Exonic hg38 LGG TCGA-E1-A7YW-01A 1 10 5'UTR-5'UTR Intra-chr q24.2 Tumor suppressor gene q24.2 Tumor suppressor gene Seq+ 91794 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCID2-SNRPA PCID2 chr13 113208599 - SNRPA chr19 40759431 + Exonic hg38 LGG TCGA-E1-A7Z2-01A 54 111 In-Frame Inter-chr q34 q13.2 Seq+ 91795 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKT2-ZNF576 AKT2 chr19 40265222 - ZNF576 chr19 43597094 + Exonic hg38 LGG TCGA-E1-A7Z2-01A 11 34 CDS-5'UTR Intra-chr q13.2 AGC:Akt Oncogene q13.31 Transcription factor Seq+ 91796 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKT2-SRRM5 AKT2 chr19 40265222 - SRRM5 chr19 43597094 + Exonic hg38 LGG TCGA-E1-A7Z2-01A 11 30 CDS-5'UTR Intra-chr q13.2 AGC:Akt Oncogene q13.31 Seq+ 91797 ChimerSeq TCGA FAWG TCGA_RNA-Seq KPNA6-TMEM39B KPNA6 chr1 32108134 + TMEM39B chr1 32091675 + Exonic hg38 LGG TCGA-E1-A7Z2-01A 11 16 Out-of-frame Intra-chr p35.2 p35.2 Seq+ 91798 ChimerSeq TCGA FAWG TCGA_RNA-Seq PMS2-DNAH11 PMS2 chr7 6008997 - DNAH11 chr7 21773766 + Exonic hg38 LGG TCGA-E1-A7Z2-01A 7 17 Out-of-frame Intra-chr p22.1 Oncogene p15.3 Seq+ 91799 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB40C-PTRH1 RAB40C chr16 618260 + PTRH1 chr9 127695141 - Exonic hg38 LGG TCGA-E1-A7Z2-01A 4 29 CDS-3'UTR Inter-chr p13.3 q34.11 Seq+ 91800 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAML2-ATG13 MAML2 chr11 96091892 - ATG13 chr11 46644279 + Exonic hg38 LGG TCGA-E1-A7Z2-01A 4 15 CDS-5'UTR Intra-chr q21 Oncogene p11.2 Seq+ 91801 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUMBL-CYP2F1 NUMBL chr19 40686911 - CYP2F1 chr19 41120403 + Exonic hg38 LGG TCGA-E1-A7Z2-01A 3 11 In-Frame Intra-chr q13.2 q13.2 Seq+ 91802 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG16L1-NGEF ATG16L1 chr2 233293357 + NGEF chr2 232920585 - Exonic hg38 LGG TCGA-E1-A7Z2-01A 4 5 3'UTR-CDS Intra-chr q37.1 Seq+ 91803 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2AK1-GLCCI1 EIF2AK1 chr7 6024709 - GLCCI1 chr7 8084897 + Exonic hg38 LGG TCGA-E1-A7Z2-01A 3 4 Out-of-frame Intra-chr p22.1 p21.3 Seq+ 91804 ChimerSeq TCGA FAWG TCGA_RNA-Seq DZANK1-RRBP1 DZANK1 chr20 18412646 - RRBP1 chr20 17643127 - Exonic hg38 LGG TCGA-E1-A7Z2-01A 2 4 In-Frame Intra-chr p11.23 p12.1 91805 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF19-IGSF8 PHF19 chr9 120877091 - IGSF8 chr1 160095246 - Exonic hg38 LGG TCGA-E1-A7Z2-01A 1 3 5'UTR-CDS Inter-chr q33.2 q23.2 91806 ChimerSeq TCGA FAWG TCGA_RNA-Seq LARP1-MAFF LARP1 chr5 154756193 + MAFF chr22 38213823 + Exonic hg38 LGG TCGA-E1-A7Z4-01A 30 98 CDS-5'UTR Inter-chr q33.2 q13.1 Transcription factor Seq+ 91807 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF1-GJC3 SMURF1 chr7 99143726 - GJC3 chr7 99923603 - Exonic hg38 LGG TCGA-FG-5963-01A 36 97 In-Frame Intra-chr q22.1 Seq+ 91808 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCKAP5-DYNC2H1 NCKAP5 chr2 133213716 - DYNC2H1 chr11 103435943 + Exonic hg38 LGG TCGA-FG-5963-01A 9 21 In-Frame Inter-chr q21.2 q22.3 Seq+ 91809 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTX4-ABTB2 DTX4 chr11 59204746 + ABTB2 chr11 34204689 - Exonic hg38 LGG TCGA-FG-5963-01A 5 26 Out-of-frame Intra-chr q12.1 p13 Seq+ 91810 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOX6-PTPRJ SOX6 chr11 16341012 - PTPRJ chr11 48112747 + Exonic hg38 LGG TCGA-FG-5963-01A 8 11 Out-of-frame Intra-chr p15.2 Transcription factor p11.2 Tumor suppressor gene Seq+ 91811 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPPED2-AMOTL1 MPPED2 chr11 30580246 - AMOTL1 chr11 94821530 + Exonic hg38 LGG TCGA-FG-5963-01A 8 8 In-Frame Intra-chr p14.1 q21 Seq+ 91812 ChimerSeq TCGA FAWG TCGA_RNA-Seq DMTF1-SEMA3D DMTF1 chr7 87171089 + SEMA3D chr7 85073081 - Exonic hg38 LGG TCGA-FG-5963-01A 3 14 In-Frame Intra-chr q21.12 Tumor suppressor gene Transcription factor q21.11 Seq+ 91813 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMOTL1-CCDC88B AMOTL1 chr11 94854082 + CCDC88B chr11 64351476 + Exonic hg38 LGG TCGA-FG-5963-01A 2 17 In-Frame Intra-chr q21 q13.1 Seq+ 91814 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLI3-TMEM243 GLI3 chr7 42023468 - TMEM243 chr7 87199057 - Exonic hg38 LGG TCGA-FG-5963-01A 5 4 In-Frame Intra-chr p14.1 Transcription factor q21.12 Seq+ 91815 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM135-GPD1L TMEM135 chr11 87038186 + GPD1L chr3 32128076 + Exonic hg38 LGG TCGA-FG-5963-01A 4 8 Out-of-frame Inter-chr q14.2 p22.3 Seq+ 91816 ChimerSeq TCGA FAWG TCGA_RNA-Seq CKAP5-TMEM135 CKAP5 chr11 46776255 - TMEM135 chr11 87067694 + Exonic hg38 LGG TCGA-FG-5963-01A 2 12 In-Frame Intra-chr p11.2 q14.2 Seq+ 91817 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLB1-INSC GLB1 chr3 33068230 - INSC chr11 15238919 + Exonic hg38 LGG TCGA-FG-5963-01A 2 9 In-Frame Inter-chr p22.3 p15.2 Seq+ 91818 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGF12-LAMP3 FGF12 chr3 192727181 - LAMP3 chr3 183154391 - Exonic hg38 LGG TCGA-FG-5963-01A 2 8 In-Frame Intra-chr q29 q27.1 Seq+ 91819 ChimerSeq TCGA FAWG TCGA_RNA-Seq HARBI1-TNS3 HARBI1 chr11 46615568 - TNS3 chr7 47305003 - Exonic hg38 LGG TCGA-FG-5963-01A 1 9 In-Frame Inter-chr p11.2 p12.3 Seq+ 91820 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF1-TRIM4 SMURF1 chr7 99143726 - TRIM4 chr7 99909660 - Exonic hg38 LGG TCGA-FG-5963-01A 2 4 Out-of-frame Intra-chr q22.1 Seq+ 91821 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELF1-BBOX1 CELF1 chr11 47565274 - BBOX1 chr11 27119649 + Exonic hg38 LGG TCGA-FG-5963-01A 1 5 5'UTR-CDS Intra-chr p11.2 p14.2 Seq+ 91822 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2E2-SEMA3A UBE2E2 chr3 23217312 + SEMA3A chr7 84014351 - Exonic hg38 LGG TCGA-FG-5963-01A 1 2 Out-of-frame Inter-chr p24.3 q21.11 Seq+ 91823 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFASC-PPP1R12B NFASC chr1 204988806 + PPP1R12B chr1 202562778 + Exonic hg38 LGG TCGA-FG-6688-01A 11 54 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 91824 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF7IP-CCNY ATF7IP chr12 14385400 + CCNY chr10 35483404 + Exonic hg38 LGG TCGA-FG-6691-01A 1 14 Out-of-frame Inter-chr p13.1 p11.21 91825 ChimerSeq TCGA FAWG TCGA_RNA-Seq HP1BP3-TMCO4 HP1BP3 chr1 20779812 - TMCO4 chr1 19737456 - Exonic hg38 LGG TCGA-FG-6692-01A 5 32 Out-of-frame Intra-chr p36.12 p36.13 Seq+ 91826 ChimerSeq TCGA FAWG TCGA_RNA-Seq NTRK3-LOXL2 NTRK3 chr15 88255906 - LOXL2 chr8 23333623 - Exonic hg38 LGG TCGA-FG-6692-01A 2 1 In-Frame Inter-chr q25.3 Oncogene Tumor suppressor gene p21.3 91827 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPM1-VIM NPM1 chr5 171388006 + VIM chr10 17236294 + Exonic hg38 LGG TCGA-FG-6692-01A 1 1 In-Frame Inter-chr q35.1 Oncogene Tumor suppressor gene p13 Tumor suppressor gene 91828 ChimerSeq TCGA FAWG TCGA_RNA-Seq FARS2-GCNT2 FARS2 chr6 5613320 + GCNT2 chr6 10621351 + Exonic hg38 LGG TCGA-FG-7636-01A 1 7 CDS-3'UTR Intra-chr p25.1 p24.3 Seq+ 91829 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806934 + TACC3 chr4 1739702 + Exonic hg38 LGG TCGA-FG-7643-01A 1756 5685 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 91830 ChimerSeq TCGA FAWG TCGA_RNA-Seq MINDY1-TBKBP1 MINDY1 chr1 151006312 - TBKBP1 chr17 47696079 + Exonic hg38 LGG TCGA-FG-7643-01A 2 3 5'UTR-5'UTR Inter-chr q21.3 q21.32 91831 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIMKLB-PIP4K2A RIMKLB chr12 8698297 + PIP4K2A chr10 22609717 - Exonic hg38 LGG TCGA-FG-8185-01A 10 25 5'UTR-5'UTR Inter-chr p13.31 p12.2 Seq+ 91832 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCB1-DTD1 PLCB1 chr20 8790261 + DTD1 chr20 18628127 + Exonic hg38 LGG TCGA-FG-8185-01A 3 12 Out-of-frame Intra-chr p12.3 p11.23 Seq+ 91833 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM171A1-ANKRD26 FAM171A1 chr10 15370956 - ANKRD26 chr10 27029356 - Exonic hg38 LGG TCGA-FG-8185-01A 1 7 Out-of-frame Intra-chr p13 p12.1 Seq+ 91834 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAXE-HAPLN2 NAXE chr1 156593555 + HAPLN2 chr1 156623467 + Exonic hg38 LGG TCGA-FG-8185-01A 1000 1000 CDS-5'UTR Intra-chr q22 q23.1 91835 ChimerSeq TCGA FAWG TCGA_RNA-Seq HCN2-BSG HCN2 chr19 590577 + BSG chr19 579500 + Exonic hg38 LGG TCGA-FG-8187-01A 2 36 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 91836 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAMR1-SLC1A2 PAMR1 chr11 35431989 - SLC1A2 chr11 35317516 - Exonic hg38 LGG TCGA-FG-8189-01B 1000 1000 3'UTR-CDS Intra-chr p13 p13 91837 ChimerSeq TCGA FAWG TCGA_RNA-Seq MALRD1-DTD2 MALRD1 chr10 19531351 + DTD2 chr14 31448454 - Exonic hg38 LGG TCGA-FG-A4MT-01A 1 4 Out-of-frame Inter-chr p12.31 q12 91838 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD2-OAS2 BTBD2 chr19 1993020 - OAS2 chr12 112987038 + Exonic hg38 LGG TCGA-FG-A4MU-01B 29 140 In-Frame Inter-chr p13.3 q24.13 Seq+ 91839 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC61G-GLUL SEC61G chr7 54759158 - GLUL chr1 182388750 - Exonic hg38 LGG TCGA-FG-A4MU-01B 3 10 5'UTR-5'UTR Inter-chr p11.2 q25.3 Seq+ 91840 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF1-CHIT1 ATF1 chr12 50764307 + CHIT1 chr1 203213045 - Exonic hg38 LGG TCGA-FG-A4MW-01A 6 16 5'UTR-3'UTR Inter-chr q13.12 Oncogene Transcription factor q32.1 Seq+ 91841 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHC2-R3HDM4 SHC2 chr19 430684 - R3HDM4 chr19 902130 - Exonic hg38 LGG TCGA-FG-A4MY-01A 3 17 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 91842 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDEL1-CHD3 NDEL1 chr17 8448686 + CHD3 chr17 7910847 + Exonic hg38 LGG TCGA-FG-A60L-01A 3 29 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 91843 ChimerSeq TCGA FAWG TCGA_RNA-Seq MINPP1-CFL1P1 MINPP1 chr10 87513221 + CFL1P1 chr10 87843810 + Exonic hg38 LGG TCGA-FG-A70Z-01A 17 15 CDS-3'UTR Intra-chr q23.2 Seq+ 91844 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAD1-ANKRD22 ATAD1 chr10 87790310 - ANKRD22 chr10 88823378 - Exonic hg38 LGG TCGA-FG-A70Z-01A 3 16 Out-of-frame Intra-chr q23.31 Seq+ 91845 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTEN-ATAD1 PTEN chr10 87894109 + ATAD1 chr10 87790430 - Exonic hg38 LGG TCGA-FG-A70Z-01A 2 9 3'UTR-3'UTR Intra-chr q23.31 Oncogene Tumor suppressor gene Seq+ 91846 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSP2-GLI1 CTDSP2 chr12 57846372 - GLI1 chr12 57463665 + Exonic hg38 LGG TCGA-FG-A70Z-01A 2 4 CDS-5'UTR Intra-chr q14.1 q13.3 Tumor suppressor gene Transcription factor 91847 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP15-CPSF6 USP15 chr12 62260503 + CPSF6 chr12 69251129 + Exonic hg38 LGG TCGA-FG-A70Z-01A 1 7 Out-of-frame Intra-chr q14.1 q15 Seq+ 91848 ChimerSeq TCGA FAWG TCGA_RNA-Seq NLK-ELMO1 NLK chr17 28122732 + ELMO1 chr7 37133234 - Exonic hg38 LGG TCGA-FG-A70Z-01A 1 4 In-Frame Inter-chr q11.2 CMGC:MAPK p14.1 Seq+ 91849 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL21B-INHBC METTL21B chr12 57773128 + INHBC chr12 57449277 + Exonic hg38 LGG TCGA-FG-A70Z-01A 1 2 Out-of-frame Intra-chr q13.3 91850 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED16-PALM MED16 chr19 893086 - PALM chr19 746285 + Exonic hg38 LGG TCGA-FG-A710-01A 3 19 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 91851 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASA3-KCNG2 RASA3 chr13 114052052 - KCNG2 chr18 79899040 + Exonic hg38 LGG TCGA-FG-A711-01A 13 28 5'UTR-CDS Inter-chr q23 Seq+ 91852 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBFA-XRCC5 RBFA chr18 80042219 + XRCC5 chr2 216190225 + Exonic hg38 LGG TCGA-FG-A711-01A 4 7 Out-of-frame Inter-chr q23 q35 Tumor suppressor gene Seq+ 91853 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTEN-PYGB PTEN chr10 87933251 + PYGB chr20 25269129 + Exonic hg38 LGG TCGA-FG-A87N-01A 6 18 3'UTR-CDS Inter-chr q23.31 Oncogene Tumor suppressor gene p11.21 Seq+ 91854 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLLT3-PALM2 MLLT3 chr9 20620654 - PALM2 chr9 109867491 + Exonic hg38 LGG TCGA-FG-A87N-01A 2 7 Out-of-frame Intra-chr p21.3 q31.3 Seq+ 91855 ChimerSeq TCGA FAWG TCGA_RNA-Seq PALM2-MLLT3 PALM2 chr9 109780533 + MLLT3 chr9 20456786 - Exonic hg38 LGG TCGA-FG-A87N-01A 1 8 Out-of-frame Intra-chr q31.3 p21.3 Seq+ 91856 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC35G1-SLIT1 SLC35G1 chr10 93894160 + SLIT1 chr10 97066086 - Exonic hg38 LGG TCGA-FG-A87N-01A 1 3 Out-of-frame Intra-chr q23.33 q24.1 91857 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K3-TANC2 MAP3K3 chr17 63667060 + TANC2 chr17 63388635 + Exonic hg38 LGG TCGA-FG-A87Q-01A 4 5 Out-of-frame Intra-chr q23.3 STE:STE11 q23.2 Seq+ 91858 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC2-WFDC21P TANC2 chr17 63389544 + WFDC21P chr17 60085203 - Exonic hg38 LGG TCGA-FG-A87Q-01A 1 8 CDS-3'UTR Intra-chr q23.2 q23.1 91859 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC2-TMEM104 TANC2 chr17 63074014 + TMEM104 chr17 74785482 + Exonic hg38 LGG TCGA-FG-A87Q-01A 1 5 Out-of-frame Intra-chr q23.2 q25.1 Seq+ 91860 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-TACO1 BCAS3 chr17 61084564 + TACO1 chr17 63604534 + Exonic hg38 LGG TCGA-FG-A87Q-01A 1 3 In-Frame Intra-chr q23.2 q23.3 91861 ChimerSeq TCGA FAWG TCGA_RNA-Seq HPSE2-CWF19L1 HPSE2 chr10 99144238 - CWF19L1 chr10 100243777 - Exonic hg38 LGG TCGA-FN-7833-01A 1 5 In-Frame Intra-chr q24.2 q24.31 Seq+ 91862 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR49-VEPH1 WDR49 chr3 167560064 - VEPH1 chr3 157381376 - Exonic hg38 LGG TCGA-HT-7470-01A 3 13 In-Frame Intra-chr q26.1 q25.32 Seq+ 91863 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIAPH2-F8 DIAPH2 chrX 96758258 + F8 chrX 154837752 - Exonic hg38 LGG TCGA-HT-7470-01A 1 9 In-Frame Intra-chr q21.33 q28 Seq+ 91864 ChimerSeq TCGA FAWG TCGA_RNA-Seq NLGN1-SERPINI1 NLGN1 chr3 173807832 + SERPINI1 chr3 167807244 + Exonic hg38 LGG TCGA-HT-7470-01A 2 4 Out-of-frame Intra-chr q26.31 q26.1 91865 ChimerSeq TCGA FAWG TCGA_RNA-Seq THSD7A-PRKAR1B THSD7A chr7 11417450 - PRKAR1B chr7 551470 - Exonic hg38 LGG TCGA-HT-7470-01A 1 3 In-Frame Intra-chr p21.3 p22.3 91866 ChimerSeq TCGA FAWG TCGA_RNA-Seq LARGE1-CRKL LARGE1 chr22 33564848 - CRKL chr22 20933779 + Exonic hg38 LGG TCGA-HT-7472-01A 1 10 Out-of-frame Intra-chr q12.3 q11.21 Oncogene 91867 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD2-LINGO3 BTBD2 chr19 2015297 - LINGO3 chr19 2291822 - Exonic hg38 LGG TCGA-HT-7475-01A 3 16 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 91868 ChimerSeq TCGA FAWG TCGA_RNA-Seq BOP1-NIPAL2 BOP1 chr8 144291272 - NIPAL2 chr8 98222600 - Exonic hg38 LGG TCGA-HT-7475-01A 2 8 Out-of-frame Intra-chr q24.3 q22.2 Seq+ 91869 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD2-CSNK1G1 CHD2 chr15 92949043 + CSNK1G1 chr15 64181219 - Exonic hg38 LGG TCGA-HT-7477-01B 41 33 Out-of-frame Intra-chr q26.1 q22.31 91870 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBRM1-KYNU PBRM1 chr3 52658199 - KYNU chr2 142985084 + Exonic hg38 LGG TCGA-HT-7477-01B 21 97 In-Frame Inter-chr p21.1 Oncogene Tumor suppressor gene q22.2 Seq+ 91871 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF804A-IRF2 ZNF804A chr2 184599070 + IRF2 chr4 184429070 - Exonic hg38 LGG TCGA-HT-7477-01B 20 97 CDS-5'UTR Inter-chr q32.1 Transcription factor q35.1 Transcription factor Seq+ 91872 ChimerSeq TCGA FAWG TCGA_RNA-Seq THRB-NECTIN3 THRB chr3 24297226 - NECTIN3 chr3 111112030 + Exonic hg38 LGG TCGA-HT-7477-01B 1 35 5'UTR-CDS Intra-chr p24.2 Tumor suppressor gene Transcription factor q13.13 91873 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIER3-PDE4D MIER3 chr5 56950628 - PDE4D chr5 59193536 - Exonic hg38 LGG TCGA-HT-7477-01B 9 1 Out-of-frame Intra-chr q11.2 q12.1 Seq+ 91874 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA4-UBE2E2 ITGA4 chr2 181458317 + UBE2E2 chr3 23499608 + Exonic hg38 LGG TCGA-HT-7477-01B 5 6 Out-of-frame Inter-chr q31.3 p24.3 Seq+ 91875 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBMS3-NMNAT3 RBMS3 chr3 29183129 + NMNAT3 chr3 139627761 - Exonic hg38 LGG TCGA-HT-7477-01B 3 12 5'UTR-5'UTR Intra-chr p24.1 Tumor suppressor gene q23 91876 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCFD2-SPINK2 SCFD2 chr4 53145333 - SPINK2 chr4 56820579 - Exonic hg38 LGG TCGA-HT-7477-01B 1 9 In-Frame Intra-chr q12 q12 Seq+ 91877 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A51-DCN SLC25A51 chr9 37899829 - DCN chr12 91164717 - Exonic hg38 LGG TCGA-HT-7477-01B 1 9 5'UTR-CDS Inter-chr p13.1 q21.33 Tumor suppressor gene 91878 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAGI2-VWC2 MAGI2 chr7 79453020 - VWC2 chr7 49802711 + Exonic hg38 LGG TCGA-HT-7477-01B 1 5 Out-of-frame Intra-chr q21.11 p12.2 Seq+ 91879 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJA1-GALNTL6 DNAJA1 chr9 33030667 + GALNTL6 chr4 173009178 + Exonic hg38 LGG TCGA-HT-7477-01B 1 4 Out-of-frame Inter-chr p21.1 q34.1 Seq+ 91880 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL38-BCAS3 RPL38 chr17 74204190 + BCAS3 chr17 60902620 + Exonic hg38 LGG TCGA-HT-7479-01A 4 15 Out-of-frame Intra-chr q25.1 q23.2 Seq+ 91881 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1D-NUP85 PPM1D chr17 60648082 + NUP85 chr17 75225103 + Exonic hg38 LGG TCGA-HT-7479-01A 1 8 In-Frame Intra-chr q23.2 q25.1 Seq+ 91882 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERCC6L2-GTF3C4 ERCC6L2 chr9 95941549 + GTF3C4 chr9 132677977 + Exonic hg38 LGG TCGA-HT-7483-01A 3 17 Out-of-frame Intra-chr q22.32 q34.13 Seq+ 91883 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAPGEF1-SEC16A RAPGEF1 chr9 131739770 - SEC16A chr9 136477684 - Exonic hg38 LGG TCGA-HT-7483-01A 3 4 CDS-5'UTR Intra-chr q34.13 q34.3 91884 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBR1-STARD9 UBR1 chr15 42970520 - STARD9 chr15 42634856 + Exonic hg38 LGG TCGA-HT-7483-01A 3 4 Out-of-frame Intra-chr q15.2 q15.2 91885 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLEU2-ATE1 DLEU2 chr13 50075559 - ATE1 chr10 121743858 - Exonic hg38 LGG TCGA-HT-7483-01A 2 6 3'UTR-3'UTR Inter-chr q14.2 Tumor suppressor gene q26.13 Seq+ 91886 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNJ1-PDE9A SYNJ1 chr21 32726772 - PDE9A chr21 42743776 + Exonic hg38 LGG TCGA-HT-7603-01A 6 17 In-Frame Intra-chr q22.11 q22.3 Seq+ 91887 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE9A-DHRS7 PDE9A chr21 42733426 + DHRS7 chr14 60156152 - Exonic hg38 LGG TCGA-HT-7603-01A 2 14 In-Frame Inter-chr q22.3 q23.1 Seq+ 91888 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF136-NFIX ZNF136 chr19 12163206 + NFIX chr19 13025021 + Exonic hg38 LGG TCGA-HT-7604-01A 41 88 In-Frame Intra-chr p13.2 Transcription factor p13.13 Transcription factor Seq+ 91889 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANBP9-BLOC1S5 RANBP9 chr6 13696785 - BLOC1S5 chr6 8015828 - Exonic hg38 LGG TCGA-HT-7604-01A 5 23 In-Frame Intra-chr p23 Tumor suppressor gene p24.3 Seq+ 91890 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANBP9-TXNDC5 RANBP9 chr6 13696785 - TXNDC5 chr6 7904723 - Exonic hg38 LGG TCGA-HT-7604-01A 3 5 In-Frame Intra-chr p23 Tumor suppressor gene p24.3 Seq+ 91891 ChimerSeq TCGA FAWG TCGA_RNA-Seq HCFC2-ANKS1B HCFC2 chr12 104098480 + ANKS1B chr12 99246864 - Exonic hg38 LGG TCGA-HT-7611-01A 2 7 Out-of-frame Intra-chr q23.3 q23.1 Seq+ 91892 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFAP1-NTRK2 AFAP1 chr4 7778762 - NTRK2 chr9 84741892 + Exonic hg38 LGG TCGA-HT-7680-01A 24 147 In-Frame Inter-chr p16.1 q21.33 Oncogene Seq+ 91893 ChimerSeq TCGA FAWG TCGA_RNA-Seq NTRK2-AFAP1 NTRK2 chr9 84727959 + AFAP1 chr4 7774903 - Exonic hg38 LGG TCGA-HT-7680-01A 8 16 In-Frame Inter-chr q21.33 Oncogene p16.1 Seq+ 91894 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDRG2-SPARC NDRG2 chr14 21018763 - SPARC chr5 151669784 - Exonic hg38 LGG TCGA-HT-7680-01A 1 8 In-Frame Inter-chr q11.2 Tumor suppressor gene q33.1 Tumor suppressor gene 91895 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX15-MAJIN SNX15 chr11 65027636 + MAJIN chr11 64940646 - Exonic hg38 LGG TCGA-HT-7686-01A 36 106 In-Frame Intra-chr q13.1 q13.1 91896 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICAL3-FXYD6 MICAL3 chr22 18001393 - FXYD6 chr11 117842781 - Exonic hg38 LGG TCGA-HT-7686-01A 11 143 5'UTR-5'UTR Inter-chr q11.21 q23.3 Seq+ 91897 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC6B-SLC35F2 TNRC6B chr22 40178140 + SLC35F2 chr11 107815965 - Exonic hg38 LGG TCGA-HT-7686-01A 17 110 In-Frame Inter-chr q13.1 q22.3 Seq+ 91898 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCNX3-C11orf80 PCNX3 chr11 65630604 + C11orf80 chr11 66842849 + Exonic hg38 LGG TCGA-HT-7686-01A 3 46 Out-of-frame Intra-chr q13.1 q13.2 91899 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCNX3-RCE1 PCNX3 chr11 65630604 + RCE1 chr11 66842849 + Exonic hg38 LGG TCGA-HT-7686-01A 3 46 CDS-5'UTR Intra-chr q13.1 q13.2 91900 ChimerSeq TCGA FAWG TCGA_RNA-Seq EWSR1-NCAPH2 EWSR1 chr22 29282557 + NCAPH2 chr22 50516447 + Exonic hg38 LGG TCGA-HT-7686-01A 4 35 Out-of-frame Intra-chr q12.2 q13.33 Seq+ 91901 ChimerSeq TCGA FAWG TCGA_RNA-Seq FXYD6-OSBP2 FXYD6 chr11 117876592 - OSBP2 chr22 30870429 + Exonic hg38 LGG TCGA-HT-7686-01A 4 26 5'UTR-5'UTR Inter-chr q23.3 q12.2 Seq+ 91902 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHD1-GRK3 EHD1 chr11 64859924 - GRK3 chr22 25661576 + Exonic hg38 LGG TCGA-HT-7686-01A 4 12 In-Frame Inter-chr q13.1 q12.1 91903 ChimerSeq TCGA FAWG TCGA_RNA-Seq MN1-MIR100HG MN1 chr22 27796763 - MIR100HG chr11 122091719 - Exonic hg38 LGG TCGA-HT-7686-01A 2 14 CDS-3'UTR Inter-chr q12.1 Oncogene q24.1 91904 ChimerSeq TCGA FAWG TCGA_RNA-Seq C22orf39-ZBTB16 C22orf39 chr22 19396787 - ZBTB16 chr11 114156337 + Exonic hg38 LGG TCGA-HT-7686-01A 3 6 3'UTR-CDS Inter-chr q11.21 q23.2 Tumor suppressor gene Transcription factor Seq+ 91905 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIRA-ZBTB16 HIRA chr22 19396787 - ZBTB16 chr11 114156337 + Exonic hg38 LGG TCGA-HT-7686-01A 3 6 Out-of-frame Inter-chr q11.21 Tumor suppressor gene q23.2 Tumor suppressor gene Transcription factor Seq+ 91906 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSF1-KLC2 RSF1 chr11 77820528 - KLC2 chr11 66262814 + Exonic hg38 LGG TCGA-HT-7686-01A 2 5 In-Frame Intra-chr q14.1 q13.2 Seq+ 91907 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX6-TSPAN18 DDX6 chr11 118757171 - TSPAN18 chr11 44906407 + Exonic hg38 LGG TCGA-HT-7686-01A 1 8 CDS-5'UTR Intra-chr q23.3 p11.2 Seq+ 91908 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOP3B-GRAMD1B TOP3B chr22 21960321 - GRAMD1B chr11 123480816 + Exonic hg38 LGG TCGA-HT-7686-01A 1 3 Out-of-frame Inter-chr q11.22 q24.1 91909 ChimerSeq TCGA FAWG TCGA_RNA-Seq QKI-AKAP7 QKI chr6 163562069 + AKAP7 chr6 131282399 + Exonic hg38 LGG TCGA-HT-7689-01A 2 32 CDS-3'UTR Intra-chr q26 q23.2 Seq+ 91910 ChimerSeq TCGA FAWG TCGA_RNA-Seq VKORC1-SGF29 VKORC1 chr16 31094557 - SGF29 chr16 28581055 + Exonic hg38 LGG TCGA-HT-7689-01A 2 21 CDS-5'UTR Intra-chr p11.2 p11.2 91911 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPNS1-ZNF668 SPNS1 chr16 28978044 + ZNF668 chr16 31064481 - Exonic hg38 LGG TCGA-HT-7689-01A 1 11 Out-of-frame Intra-chr p11.2 p11.2 Tumor suppressor gene Transcription factor Seq+ 91912 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM156A-XAGE2 FAM156A chrX 52995306 - XAGE2 chrX 52370007 + Exonic hg38 LGG TCGA-HT-7689-01A 1 3 5'UTR-5'UTR Intra-chr p11.22 p11.22 91913 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTGDS-INF2 PTGDS chr9 136977692 + INF2 chr14 104718795 + Exonic hg38 LGG TCGA-HT-7689-01A 1 2 Out-of-frame Inter-chr q34.3 q32.33 91914 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITPR2-ADIPOR2 ITPR2 chr12 26790157 - ADIPOR2 chr12 1772842 + Exonic hg38 LGG TCGA-HT-7690-01A 17 26 CDS-3'UTR Intra-chr p11.23 p13.33 Seq+ 91915 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF33A-PARD3 ZNF33A chr10 38017386 + PARD3 chr10 34269899 - Exonic hg38 LGG TCGA-HT-7690-01A 2 4 In-Frame Intra-chr p11.1 Transcription factor p11.21 Seq+ 91916 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRP1-CUL2 NRP1 chr10 33330708 - CUL2 chr10 35010442 - Exonic hg38 LGG TCGA-HT-7690-01A 1 6 Out-of-frame Intra-chr p11.22 p11.21 Tumor suppressor gene Seq+ 91917 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABR-YWHAE ABR chr17 1079330 - YWHAE chr17 1365058 - Exonic hg38 LGG TCGA-HT-7693-01A 63 341 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 91918 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEXN-GIPC2 NEXN chr1 77888759 + GIPC2 chr1 78119393 + Exonic hg38 LGG TCGA-HT-7695-01A 1 10 5'UTR-CDS Intra-chr p31.1 p31.1 91919 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX30-MAP4 DHX30 chr3 47829134 + MAP4 chr3 47872100 - Exonic hg38 LGG TCGA-HT-7695-01A 1 1 In-Frame Intra-chr p21.31 p21.31 91920 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOR2-GATA4 NCOR2 chr12 124378237 - GATA4 chr8 11748919 + Exonic hg38 LGG TCGA-HT-7854-01A 186 935 CDS-5'UTR Inter-chr q24.31 p23.1 Tumor suppressor gene Transcription factor Seq+ 91921 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAMR1-SLC1A2 PAMR1 chr11 35439627 - SLC1A2 chr11 35317516 - Exonic hg38 LGG TCGA-HT-7854-01A 1 3 In-Frame Intra-chr p13 p13 91922 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS9D1-ZNF827 VPS9D1 chr16 89720763 - ZNF827 chr4 145779511 - Exonic hg38 LGG TCGA-HT-7857-01A 5 12 Out-of-frame Inter-chr q24.3 q31.22 Transcription factor Seq+ 91923 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP9-TAT MAP9 chr4 155360168 - TAT chr16 71576427 - Exonic hg38 LGG TCGA-HT-7857-01A 2 8 CDS-5'UTR Inter-chr q32.1 q22.2 Tumor suppressor gene Seq+ 91924 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNBP-ALDH1L1 CNBP chr3 129183776 - ALDH1L1 chr3 126112880 - Exonic hg38 LGG TCGA-HT-7858-01A 5 40 5'UTR-CDS Intra-chr q21.3 q21.3 Seq+ 91925 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREBRF-CSNK1A1 CREBRF chr5 173056479 + CSNK1A1 chr5 149520388 - Exonic hg38 LGG TCGA-HT-7860-01A 2 17 5'UTR-CDS Intra-chr q35.1 q32 Tumor suppressor gene Seq+ 91926 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC1-LRRC42 HDAC1 chr1 32292218 + LRRC42 chr1 53951986 + Exonic hg38 LGG TCGA-HT-7860-01A 1 9 CDS-5'UTR Intra-chr p35.2 Tumor suppressor gene p32.3 Seq+ 91927 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC91-FAR2 CCDC91 chr12 28259442 + FAR2 chr12 29270412 + Exonic hg38 LGG TCGA-HT-7873-01B 17 65 5'UTR-5'UTR Intra-chr p11.22 p11.22 Seq+ 91928 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAPSS2-ATAD1 PAPSS2 chr10 87715843 + ATAD1 chr10 87814612 - Exonic hg38 LGG TCGA-HT-7873-01B 11 29 CDS-5'UTR Intra-chr q23.2 Seq+ 91929 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPSM1-NUP214 GPSM1 chr9 136358209 + NUP214 chr9 131127524 + Exonic hg38 LGG TCGA-HT-7873-01B 3 21 Out-of-frame Intra-chr q34.3 q34.13 Oncogene Seq+ 91930 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK5RAP2-GRIN1 CDK5RAP2 chr9 120518427 - GRIN1 chr9 137142013 + Exonic hg38 LGG TCGA-HT-7873-01B 3 8 In-Frame Intra-chr q33.2 q34.3 Seq+ 91931 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1161-KIF24 KIAA1161 chr9 34370433 - KIF24 chr9 34329200 - Exonic hg38 LGG TCGA-HT-7873-01B 1000 1000 Out-of-frame Intra-chr p13.3 p13.3 91932 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR20-TECPR2 WDR20 chr14 102140172 + TECPR2 chr14 102496979 + Exonic hg38 LGG TCGA-HT-7875-01A 1 15 In-Frame Intra-chr q32.31 q32.31 91933 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLIS3-PUM3 GLIS3 chr9 4286038 - PUM3 chr9 2838517 - Exonic hg38 LGG TCGA-HT-7882-01A 3 27 CDS-5'UTR Intra-chr p24.2 Transcription factor p24.2 91934 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBR1-TTBK2 UBR1 chr15 42966153 - TTBK2 chr15 42840433 - Exonic hg38 LGG TCGA-HT-7902-01A 6 15 In-Frame Intra-chr q15.2 q15.2 CK1:TTBK Seq+ 91935 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF146-KMT2B ZNF146 chr19 36215196 + KMT2B chr19 35722359 + Exonic hg38 LGG TCGA-HT-8010-01A 1 11 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.12 Oncogene Transcription factor 91936 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUAK2-CYB5R1 NUAK2 chr1 205321398 - CYB5R1 chr1 202966898 - Exonic hg38 LGG TCGA-HT-8011-01A 4 17 In-Frame Intra-chr q32.1 q32.1 Seq+ 91937 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAM10-ZNF770 ADAM10 chr15 58749480 - ZNF770 chr15 34987673 - Exonic hg38 LGG TCGA-HT-8011-01A 1 11 CDS-5'UTR Intra-chr q21.3 q14 Transcription factor Seq+ 91938 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP6V0A1-NBR1 ATP6V0A1 chr17 42507627 + NBR1 chr17 43186250 + Exonic hg38 LGG TCGA-HT-8013-01A 3 3 In-Frame Intra-chr q21.2 q21.31 91939 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSCAML1-MPZL2 DSCAML1 chr11 117776791 - MPZL2 chr11 118263097 - Exonic hg38 LGG TCGA-HT-8015-01B 1 4 In-Frame Intra-chr q23.3 q23.3 Seq+ 91940 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIP1R-KCNMB4 HIP1R chr12 122848608 + KCNMB4 chr12 70400209 + Exonic hg38 LGG TCGA-HT-8018-01A 1 2 In-Frame Intra-chr q24.31 q15 91941 ChimerSeq TCGA FAWG TCGA_RNA-Seq SWAP70-ZNF143 SWAP70 chr11 9732710 + ZNF143 chr11 9494646 + Exonic hg38 LGG TCGA-HT-8104-01A 5 49 In-Frame Intra-chr p15.4 p15.4 Transcription factor Seq+ 91942 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANK2-ALPK1 ANK2 chr4 112904514 + ALPK1 chr4 112429149 + Exonic hg38 LGG TCGA-HT-8104-01A 10 13 In-Frame Intra-chr q25 q25 Seq+ 91943 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP93-GNAO1 NUP93 chr16 56758655 + GNAO1 chr16 56275931 + Exonic hg38 LGG TCGA-HT-8104-01A 8 21 Out-of-frame Intra-chr q13 q13 Seq+ 91944 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBF2-CALM3 SBF2 chr11 10193902 - CALM3 chr19 46605827 + Exonic hg38 LGG TCGA-HT-8104-01A 5 12 In-Frame Inter-chr p15.4 q13.32 Seq+ 91945 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA6-MT3 PLEKHA6 chr1 204359694 - MT3 chr16 56590840 + Exonic hg38 LGG TCGA-HT-8104-01A 1 26 5'UTR-CDS Inter-chr q32.1 q13 91946 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCALD-LAPTM4B NCALD chr8 101915809 - LAPTM4B chr8 97805353 + Exonic hg38 LGG TCGA-HT-8106-01A 4 31 5'UTR-CDS Intra-chr q22.3 q22.1 Seq+ 91947 ChimerSeq TCGA FAWG TCGA_RNA-Seq COLEC12-CLUL1 COLEC12 chr18 480707 - CLUL1 chr18 606978 + Exonic hg38 LGG TCGA-HT-8106-01A 1 12 CDS-5'UTR Intra-chr p11.32 p11.32 Seq+ 91948 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNST-RGS7 CNST chr1 246648037 + RGS7 chr1 240827172 - Exonic hg38 LGG TCGA-HT-8108-01A 3 23 In-Frame Intra-chr q44 q43 Seq+ 91949 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF2-TECR ATF2 chr2 175168050 - TECR chr19 14562525 + Exonic hg38 LGG TCGA-HT-8111-01A 2 4 5'UTR-5'UTR Inter-chr q31.1 Transcription factor p13.12 91950 ChimerSeq TCGA FAWG TCGA_RNA-Seq PACRG-QKI PACRG chr6 162814281 + QKI chr6 163478780 + Exonic hg38 LGG TCGA-HT-8114-01A 1 4 In-Frame Intra-chr q26 Tumor suppressor gene q26 91951 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUDT22-VPS51 NUDT22 chr11 64227132 + VPS51 chr11 65109280 + Exonic hg38 LGG TCGA-HT-8114-01A 1 1 In-Frame Intra-chr q13.1 q13.1 91952 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP4-PRDM11 LRP4 chr11 46873100 - PRDM11 chr11 45204711 + Exonic hg38 LGG TCGA-HT-8563-01A 2 9 Out-of-frame Intra-chr p11.2 p11.2 Tumor suppressor gene Seq+ 91953 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM150C-SCD5 TMEM150C chr4 82561906 - SCD5 chr4 82705413 - Exonic hg38 LGG TCGA-HT-8564-01A 14 46 5'UTR-CDS Intra-chr q21.22 q21.22 Seq+ 91954 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1211-PDGFRA KIAA1211 chr4 56049299 + PDGFRA chr4 54273537 + Exonic hg38 LGG TCGA-HT-A5R7-01A 2 5 5'UTR-CDS Intra-chr q12 q12 Oncogene 91955 ChimerSeq TCGA FAWG TCGA_RNA-Seq BDH1-ZBBX BDH1 chr3 197522640 - ZBBX chr3 167242643 - Exonic hg38 LGG TCGA-HT-A5RA-01A 13 40 3'UTR-CDS Intra-chr q26.1 Seq+ 91956 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEK11-BDH1 NEK11 chr3 131170887 + BDH1 chr3 197514416 - Exonic hg38 LGG TCGA-HT-A5RA-01A 10 35 CDS-3'UTR Intra-chr q22.1 Other:NEK Seq+ 91957 ChimerSeq TCGA FAWG TCGA_RNA-Seq ISY1-MASP1 ISY1 chr3 129156633 - MASP1 chr3 187286056 - Exonic hg38 LGG TCGA-HT-A5RA-01A 4 34 Out-of-frame Intra-chr q21.3 q27.3 Seq+ 91958 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKRN1-DENND2A MKRN1 chr7 140456652 - DENND2A chr7 140519718 - Exonic hg38 LGG TCGA-HT-A5RA-01A 5 25 Out-of-frame Intra-chr q34 q34 Seq+ 91959 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDHAP1-CPNE4 SDHAP1 chr3 195971323 - CPNE4 chr3 131685958 - Exonic hg38 LGG TCGA-HT-A5RA-01A 6 6 3'UTR-CDS Intra-chr q29 q22.1 91960 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP2-LIPH SENP2 chr3 185624082 + LIPH chr3 185508877 - Exonic hg38 LGG TCGA-HT-A5RA-01A 1 23 Out-of-frame Intra-chr q27.2 q27.2 91961 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTOR-CR1 MTOR chr1 11228668 - CR1 chr1 207511569 + Exonic hg38 LGG TCGA-HT-A5RA-01A 3 11 Out-of-frame Intra-chr p36.22 Oncogene q32.2 91962 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTOR-CR1L MTOR chr1 11228668 - CR1L chr1 207683872 + Exonic hg38 LGG TCGA-HT-A5RA-01A 1000 1000 Out-of-frame Intra-chr p36.22 Oncogene q32.2 Seq+ 91963 ChimerSeq TCGA FAWG TCGA_RNA-Seq SASH1-AFDN SASH1 chr6 148519893 + AFDN chr6 167943129 + Exonic hg38 LGG TCGA-HT-A5RC-01A 9 31 In-Frame Intra-chr q24.3 Tumor suppressor gene q27 91964 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCRIB-NRBP2 SCRIB chr8 143815214 - NRBP2 chr8 143840229 - Exonic hg38 LGG TCGA-HT-A5RC-01A 4 40 5'UTR-CDS Intra-chr Tumor suppressor gene q24.3 Other:NRBP Seq+ 91965 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIAS4-ZFR2 PIAS4 chr19 4013349 + ZFR2 chr19 3823403 - Exonic hg38 LGG TCGA-HT-A5RC-01A 4 30 In-Frame Intra-chr p13.3 p13.3 Seq+ 91966 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBFD1-TMEM159 UBFD1 chr16 23559676 + TMEM159 chr16 21161085 + Exonic hg38 LGG TCGA-HT-A5RC-01A 3 27 CDS-3'UTR Intra-chr p12.2 Seq+ 91967 ChimerSeq TCGA FAWG TCGA_RNA-Seq GGA2-PRKCB GGA2 chr16 23491677 - PRKCB chr16 23988508 + Exonic hg38 LGG TCGA-HT-A5RC-01A 2 27 In-Frame Intra-chr p12.2 p12.2 Tumor suppressor gene Seq+ 91968 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFDN-SASH1 AFDN chr6 167880517 + SASH1 chr6 148390134 + Exonic hg38 LGG TCGA-HT-A5RC-01A 2 21 In-Frame Intra-chr q27 q24.3 Tumor suppressor gene 91969 ChimerSeq TCGA FAWG TCGA_RNA-Seq THBS4-PHAX THBS4 chr5 79991412 + PHAX chr5 126624575 + Exonic hg38 LGG TCGA-HT-A614-01A 1 24 5'UTR-CDS Intra-chr q14.1 q23.2 91970 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRR16-SCAMP1 PRR16 chr5 120464645 + SCAMP1 chr5 78415520 + Exonic hg38 LGG TCGA-HT-A614-01A 2 10 In-Frame Intra-chr q23.1 q14.1 Seq+ 91971 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSH3-RASGEF1C MSH3 chr5 80656531 + RASGEF1C chr5 180128610 - Exonic hg38 LGG TCGA-HT-A614-01A 2 6 Out-of-frame Intra-chr q14.1 q35.3 Seq+ 91972 ChimerSeq TCGA FAWG TCGA_RNA-Seq LHFPL2-CSNK1A1 LHFPL2 chr5 78564813 - CSNK1A1 chr5 149525171 - Exonic hg38 LGG TCGA-HT-A614-01A 1 9 5'UTR-5'UTR Intra-chr q14.1 q32 Tumor suppressor gene Seq+ 91973 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK6-SCAMP2 MAPK6 chr15 52019376 + SCAMP2 chr15 74854649 - Exonic hg38 LGG TCGA-HT-A614-01A 1 5 5'UTR-CDS Intra-chr q21.2 q24.1 Seq+ 91974 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARCH3-SRFBP1 2019_ 3_ 3_ chr5 127030350 - SRFBP1 chr5 121974196 + Exonic hg38 LGG TCGA-HT-A614-01A 1 3 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 91975 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC47A2-ALDH3A1 SLC47A2 chr17 19712703 - ALDH3A1 chr17 19743463 - Exonic hg38 LGG TCGA-HT-A617-01A 14 60 In-Frame Intra-chr p11.2 p11.2 Seq+ 91976 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPHB1-BFSP2 EPHB1 chr3 135154276 + BFSP2 chr3 133447317 + Exonic hg38 LGG TCGA-HT-A617-01A 5 28 In-Frame Intra-chr q22.2 Oncogene q22.1 Seq+ 91977 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-RHOT1 NF1 chr17 31249119 + RHOT1 chr17 32192201 + Exonic hg38 LGG TCGA-HT-A617-01A 1 10 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 91978 ChimerSeq TCGA FAWG TCGA_RNA-Seq COQ6-FLRT1 COQ6 chr14 73950495 + FLRT1 chr11 64116219 + Exonic hg38 LGG TCGA-HT-A619-01A 4 27 CDS-5'UTR Inter-chr q24.3 q13.1 Seq+ 91979 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYTH1-MACROD1 CYTH1 chr17 78698269 - MACROD1 chr11 64015281 - Exonic hg38 LGG TCGA-HT-A619-01A 2 27 In-Frame Inter-chr q25.3 q13.1 Seq+ 91980 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP4-BBOX1 USP4 chr3 49292510 - BBOX1 chr11 27057201 + Exonic hg38 LGG TCGA-HT-A619-01A 2 25 Out-of-frame Inter-chr p21.31 p14.2 Seq+ 91981 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNT2-ASZ1 WNT2 chr7 117322907 - ASZ1 chr7 117426935 - Exonic hg38 LGG TCGA-HT-A61C-01A 31 249 Out-of-frame Intra-chr q31.2 q31.2 Seq+ 91982 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST7-CFTR ST7 chr7 116953691 + CFTR chr7 117559464 + Exonic hg38 LGG TCGA-HT-A61C-01A 24 165 Out-of-frame Intra-chr q31.2 Tumor suppressor gene q31.2 Tumor suppressor gene Seq+ 91983 ChimerSeq TCGA FAWG TCGA_RNA-Seq MET-AS2 MET chr7 116731859 + AS2 chr7 117112667 - Exonic hg38 LGG TCGA-HT-A61C-01A 15 154 Out-of-frame Intra-chr q31.2 TK:Met Oncogene 91984 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNT2-ST7 WNT2 chr7 117297612 - ST7 chr7 117099762 + Exonic hg38 LGG TCGA-HT-A61C-01A 1000 1000 In-Frame Intra-chr q31.2 q31.2 Tumor suppressor gene 91985 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASZ1-WNT2 ASZ1 chr7 117420163 - WNT2 chr7 117320793 - Exonic hg38 LGG TCGA-HT-A61C-01A 1000 1000 In-Frame Intra-chr q31.2 q31.2 Seq+ 91986 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNRF3-CRYBB2 ZNRF3 chr22 28884066 + CRYBB2 chr22 25221404 + Exonic hg38 LGG TCGA-HT-A74H-01A 9 50 CDS-5'UTR Intra-chr q12.1 q11.23 Seq+ 91987 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC28-FAM19A5 TTC28 chr22 28629552 - FAM19A5 chr22 48646597 + Exonic hg38 LGG TCGA-HT-A74H-01A 2 3 Out-of-frame Intra-chr q12.1 q13.32 91988 ChimerSeq TCGA FAWG TCGA_RNA-Seq NELFB-EXD3 NELFB chr9 137257054 + EXD3 chr9 137324143 - Exonic hg38 LGG TCGA-HT-A74J-01A 9 35 In-Frame Intra-chr q34.3 q34.3 Seq+ 91989 ChimerSeq TCGA FAWG TCGA_RNA-Seq PFKL-AIRE PFKL chr21 44300190 + AIRE chr21 44297656 + Exonic hg38 LGG TCGA-HW-7490-01A 6 3 Out-of-frame Intra-chr q22.3 q22.3 Transcription factor Seq+ 91990 ChimerSeq TCGA FAWG TCGA_RNA-Seq HYOU1-NLRX1 HYOU1 chr11 119045127 - NLRX1 chr11 119171356 + Exonic hg38 LGG TCGA-HW-8321-01A 4 19 5'UTR-5'UTR Intra-chr q23.3 Seq+ 91991 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR45B-OGFOD3 WDR45B chr17 82643949 - OGFOD3 chr17 82415627 - Exonic hg38 LGG TCGA-HW-8321-01A 3 7 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 91992 ChimerSeq TCGA FAWG TCGA_RNA-Seq OGFOD3-WDR45B OGFOD3 chr17 82411455 - WDR45B chr17 82627291 - Exonic hg38 LGG TCGA-HW-8321-01A 2 10 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 91993 ChimerSeq TCGA FAWG TCGA_RNA-Seq NKD1-NOD2 NKD1 chr16 50632407 + NOD2 chr16 50707854 + Exonic hg38 LGG TCGA-HW-8322-01A 1000 1000 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 91994 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUMF2-SEPT14 SUMF2 chr7 56079608 + SEPT14 chr7 55819223 - Exonic hg38 LGG TCGA-HW-A5KK-01A 17 141 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 91995 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPS1-DEPTOR TRPS1 chr8 115668545 - DEPTOR chr8 120049576 + Exonic hg38 LGG TCGA-HW-A5KK-01A 13 47 5'UTR-CDS Intra-chr q23.3 Transcription factor q24.12 Seq+ 91996 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRB1-EXT1 ADGRB1 chr8 142511073 + EXT1 chr8 117822597 - Exonic hg38 LGG TCGA-HW-A5KK-01A 3 14 In-Frame Intra-chr q24.3 q24.11 Oncogene Tumor suppressor gene 91997 ChimerSeq TCGA FAWG TCGA_RNA-Seq CORO1C-ZNF664 CORO1C chr12 108731429 - ZNF664 chr12 124011381 + Exonic hg38 LGG TCGA-HW-A5KL-01A 8 49 5'UTR-5'UTR Intra-chr q24.11 q24.31 Transcription factor Seq+ 91998 ChimerSeq TCGA FAWG TCGA_RNA-Seq CORO1C-RFLNA CORO1C chr12 108731429 - RFLNA chr12 124149595 + Exonic hg38 LGG TCGA-HW-A5KL-01A 2 14 5'UTR-5'UTR Intra-chr q24.11 q24.31 91999 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFSWAP-MYO1H SFSWAP chr12 131766308 + MYO1H chr12 109407794 + Exonic hg38 LGG TCGA-HW-A5KL-01A 1 5 In-Frame Intra-chr q24.33 q24.11 Seq+ 92000 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSP2-COL15A1 CTDSP2 chr12 57846372 - COL15A1 chr9 98996934 + Exonic hg38 LGG TCGA-IK-7675-01A 24 44 Out-of-frame Inter-chr q14.1 q22.33 Seq+ 92001 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIP2B-RTTN DIP2B chr12 50708562 + RTTN chr18 70128546 - Exonic hg38 LGG TCGA-IK-7675-01A 4 20 Out-of-frame Inter-chr q13.12 q22.2 Seq+ 92002 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOPORS-ADAMTSL1 TOPORS chr9 32550774 - ADAMTSL1 chr9 18826284 + Exonic hg38 LGG TCGA-IK-7675-01A 1 17 Out-of-frame Intra-chr p21.1 Tumor suppressor gene Transcription factor p22.2 Seq+ 92003 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPHB2-PDZD4 EPHB2 chr1 22785076 + PDZD4 chrX 153808595 - Exonic hg38 LGG TCGA-KT-A7W1-01A 6 29 Out-of-frame Inter-chr p36.12 Tumor suppressor gene q28 Seq+ 92004 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF26B-FMN2 KIF26B chr1 245688807 + FMN2 chr1 240123179 + Exonic hg38 LGG TCGA-KT-A7W1-01A 5 29 3'UTR-CDS Intra-chr q43 Seq+ 92005 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREBBP-GOLGA6L2 CREBBP chr16 3850297 - GOLGA6L2 chr15 23445438 - Exonic hg38 LGG TCGA-KT-A7W1-01A 9 3 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene q11.2 Seq+ 92006 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAP1GAP-NSDHL RAP1GAP chr1 21649761 - NSDHL chrX 152858770 + Exonic hg38 LGG TCGA-KT-A7W1-01A 5 18 Out-of-frame Inter-chr p36.12 Tumor suppressor gene q28 Seq+ 92007 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNST-RAP1GAP CNST chr1 246566663 + RAP1GAP chr1 21626397 - Exonic hg38 LGG TCGA-KT-A7W1-01A 2 25 5'UTR-5'UTR Intra-chr q44 p36.12 Tumor suppressor gene Seq+ 92008 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCY9-VASN ADCY9 chr16 4113750 - VASN chr16 4380869 + Exonic hg38 LGG TCGA-KT-A7W1-01A 1 8 CDS-3'UTR Intra-chr p13.3 Seq+ 92009 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF846-NFIX ZNF846 chr19 9785938 - NFIX chr19 13073047 + Exonic hg38 LGG TCGA-P5-A5EU-01A 22 137 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.13 Transcription factor Seq+ 92010 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP3-VAV1 LRP3 chr19 33196777 + VAV1 chr19 6820702 + Exonic hg38 LGG TCGA-P5-A5EU-01A 4 10 Out-of-frame Intra-chr q13.11 p13.3 Seq+ 92011 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSHZ3-CEACAM7 TSHZ3 chr19 31349180 - CEACAM7 chr19 41677503 - Exonic hg38 LGG TCGA-P5-A5EU-01A 4 6 3'UTR-3'UTR Intra-chr q12 Transcription factor Seq+ 92012 ChimerSeq TCGA FAWG TCGA_RNA-Seq INPP5A-AFAP1L2 INPP5A chr10 132538171 + AFAP1L2 chr10 114340731 - Exonic hg38 LGG TCGA-P5-A5EU-01A 4 2 Out-of-frame Intra-chr q26.3 q25.3 Tumor suppressor gene Seq+ 92013 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKT2-UPF1 AKT2 chr19 40285181 - UPF1 chr19 18845980 + Exonic hg38 LGG TCGA-P5-A5EU-01A 2 7 5'UTR-CDS Intra-chr q13.2 AGC:Akt Oncogene p13.11 Seq+ 92014 ChimerSeq TCGA FAWG TCGA_RNA-Seq VWA2-IDE VWA2 chr10 114282571 + IDE chr10 92537550 - Exonic hg38 LGG TCGA-P5-A5EU-01A 2 3 Out-of-frame Intra-chr q25.3 q23.33 Seq+ 92015 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRS-POU2F2 PTPRS chr19 5340664 - POU2F2 chr19 42122576 - Exonic hg38 LGG TCGA-P5-A5EU-01A 1 5 5'UTR-CDS Intra-chr p13.3 q13.2 Transcription factor Seq+ 92016 ChimerSeq TCGA FAWG TCGA_RNA-Seq ISPD-MEOX2 ISPD chr7 16216066 - MEOX2 chr7 15626918 - Exonic hg38 LGG TCGA-P5-A5EU-01A 1 3 Out-of-frame Intra-chr p21.2 p21.2 Transcription factor 92017 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPT-AS3 MAPT chr17 46018730 + AS3 chr17 48600447 + Exonic hg38 LGG TCGA-P5-A5EV-01A 54 514 Out-of-frame Intra-chr Tumor suppressor gene 92018 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD3-UNC45B PSMD3 chr17 39986712 + UNC45B chr17 35171322 + Exonic hg38 LGG TCGA-P5-A5EV-01A 14 18 In-Frame Intra-chr q21.1 q12 Seq+ 92019 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D19-ADGRA3 TBC1D19 chr4 26584292 + ADGRA3 chr4 22346823 - Exonic hg38 LGG TCGA-P5-A5EZ-01A 6 13 CDS-3'UTR Intra-chr p15.2 p15.2 92020 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTBP1-FAM193A CTBP1 chr4 1238183 - FAM193A chr4 2625262 + Exonic hg38 LGG TCGA-P5-A5EZ-01A 3 22 In-Frame Intra-chr p16.3 p16.3 Seq+ 92021 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTBP1-RNF4 CTBP1 chr4 1238183 - RNF4 chr4 2625262 + Exonic hg38 LGG TCGA-P5-A5EZ-01A 3 12 3'UTR-3'UTR Intra-chr p16.3 p16.3 Seq+ 92022 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1A-COQ8B PPM1A chr14 60249677 + COQ8B chr19 40714397 - Exonic hg38 LGG TCGA-P5-A5F2-01A 1 9 5'UTR-CDS Inter-chr q23.1 Tumor suppressor gene q13.2 92023 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806934 + TACC3 chr4 1731172 + Exonic hg38 LGG TCGA-P5-A72U-01A 358 1324 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 92024 ChimerSeq TCGA FAWG TCGA_RNA-Seq GIGYF2-NGEF GIGYF2 chr2 232819985 + NGEF chr2 232894916 - Exonic hg38 LGG TCGA-P5-A72U-01A 33 90 In-Frame Intra-chr q37.1 q37.1 Seq+ 92025 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCTN2-DENND3 DCTN2 chr12 57532015 - DENND3 chr8 141150834 + Exonic hg38 LGG TCGA-P5-A72U-01A 6 59 In-Frame Inter-chr q13.3 q24.3 Seq+ 92026 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHCHD3-C7orf73 CHCHD3 chr7 133024546 - C7orf73 chr7 135672753 + Exonic hg38 LGG TCGA-P5-A72U-01A 10 18 Out-of-frame Intra-chr q33 Transcription factor q33 Seq+ 92027 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHCHD3-NUP205 CHCHD3 chr7 133024546 - NUP205 chr7 135648404 + Exonic hg38 LGG TCGA-P5-A72U-01A 6 14 Out-of-frame Intra-chr q33 Transcription factor q33 Seq+ 92028 ChimerSeq TCGA FAWG TCGA_RNA-Seq TACC3-FGFR3 TACC3 chr4 1735308 + FGFR3 chr4 1806858 + Exonic hg38 LGG TCGA-P5-A72U-01A 1000 1000 Out-of-frame Intra-chr p16.3 p16.3 TK:FGFR Oncogene 92029 ChimerSeq TCGA FAWG TCGA_RNA-Seq BBX-DGKG BBX chr3 107526398 + DGKG chr3 186320707 - Exonic hg38 LGG TCGA-P5-A733-01A 1 4 5'UTR-5'UTR Intra-chr q13.12 Transcription factor q27.3 Seq+ 92030 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRFN5-DPF3 LRFN5 chr14 41608562 + DPF3 chr14 72771893 - Exonic hg38 LGG TCGA-P5-A77W-01A 1 3 5'UTR-CDS Intra-chr q21.1 q24.2 Transcription factor Seq+ 92031 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF676-KANK3 ZNF676 chr19 22193016 - KANK3 chr19 8325096 - Exonic hg38 LGG TCGA-P5-A77X-01A 78 109 3'UTR-CDS Intra-chr Transcription factor p13.2 Seq+ 92032 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAKD-C1QL1 DCAKD chr17 45024311 - C1QL1 chr17 44960293 - Exonic hg38 LGG TCGA-QH-A65X-01A 1000 1000 Out-of-frame Intra-chr q21.31 q21.31 92033 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLU-PEBP1 CLU chr8 27599780 - PEBP1 chr12 118138039 + Exonic hg38 LGG TCGA-QH-A6CS-01A 1 5 In-Frame Inter-chr p21.1 Tumor suppressor gene q24.23 Tumor suppressor gene 92034 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPNT-GSTCD NPNT chr4 105898001 + GSTCD chr4 105822954 + Exonic hg38 LGG TCGA-QH-A6CV-01A 22 98 In-Frame Intra-chr q24 q24 Seq+ 92035 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRC2B-NR1H3 PRRC2B chr9 131444328 + NR1H3 chr11 47261241 + Exonic hg38 LGG TCGA-QH-A6CV-01A 16 85 In-Frame Inter-chr q34.13 p11.2 Transcription factor Seq+ 92036 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPOP-NBPF1 SPOP chr17 49611280 - NBPF1 chr1 16564186 - Exonic hg38 LGG TCGA-QH-A6CV-01A 14 19 Out-of-frame Inter-chr q21.33 Oncogene Tumor suppressor gene p36.13 Seq+ 92037 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNAI3-GPR61 GNAI3 chr1 109548838 + GPR61 chr1 109545311 + Exonic hg38 LGG TCGA-QH-A6CV-01A 5 16 CDS-3'UTR Intra-chr p13.3 p13.3 Seq+ 92038 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAF4-FASN TRAF4 chr17 28744255 + FASN chr17 82080922 - Exonic hg38 LGG TCGA-QH-A6CV-01A 4 17 Out-of-frame Intra-chr q11.2 q25.3 Seq+ 92039 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABI2-HEXIM2 ABI2 chr2 203367044 + HEXIM2 chr17 45162750 + Exonic hg38 LGG TCGA-QH-A6CV-01A 2 13 Out-of-frame Inter-chr q33.2 Tumor suppressor gene q21.31 Seq+ 92040 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTKN-M1AP RTKN chr2 74439551 - M1AP chr2 74607223 - Exonic hg38 LGG TCGA-QH-A6CW-01A 5 67 In-Frame Intra-chr p13.1 p13.1 Seq+ 92041 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHBDF1-NPRL3 RHBDF1 chr16 61385 - NPRL3 chr16 138844 - Exonic hg38 LGG TCGA-QH-A6CX-01A 1000 1000 CDS-5'UTR Intra-chr p13.3 p13.3 92042 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYCBP2-PIBF1 MYCBP2 chr13 77156058 - PIBF1 chr13 72973591 + Exonic hg38 LGG TCGA-QH-A6X9-01A 2 31 Out-of-frame Intra-chr q22.3 q21.33 Seq+ 92043 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRBP1-DROSHA NRBP1 chr2 27428731 + DROSHA chr5 31410887 - Exonic hg38 LGG TCGA-QH-A6XC-01A 30 99 5'UTR-CDS Inter-chr p23.3 Other:NRBP Tumor suppressor gene p13.3 Seq+ 92044 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNND2-NRBP1 CTNND2 chr5 11732136 - NRBP1 chr2 27433673 + Exonic hg38 LGG TCGA-QH-A6XC-01A 14 102 In-Frame Inter-chr p15.2 p23.3 Other:NRBP Tumor suppressor gene Seq+ 92045 ChimerSeq TCGA FAWG TCGA_RNA-Seq RER1-DNAH7 RER1 chr1 2403589 + DNAH7 chr2 195756285 - Exonic hg38 LGG TCGA-QH-A6XC-01A 3 23 3'UTR-CDS Inter-chr p36.32 q32.3 Seq+ 92046 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2orf42-MRPL33 C2orf42 chr2 70248405 - MRPL33 chr2 27779433 + Exonic hg38 LGG TCGA-QH-A6XC-01A 2 19 5'UTR-CDS Intra-chr p13.3 p23.2 Seq+ 92047 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIA1-MRPL33 TIA1 chr2 70248405 - MRPL33 chr2 27779433 + Exonic hg38 LGG TCGA-QH-A6XC-01A 2 19 In-Frame Intra-chr p13.3 p23.2 Seq+ 92048 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIF1A-VRK1 HIF1A chr14 61695839 + VRK1 chr14 96833467 + Exonic hg38 LGG TCGA-R8-A6MK-01A 15 62 CDS-5'UTR Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q32.2 CK1:VRK Seq+ 92049 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRAP-KLRB1 BRAP chr12 111685711 - KLRB1 chr12 9601599 - Exonic hg38 LGG TCGA-RY-A83Z-01A 9 26 In-Frame Intra-chr q24.12 p13.31 Seq+ 92050 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD1-RNF130 NSD1 chr5 177136030 + RNF130 chr5 180040647 - Exonic hg38 LGG TCGA-RY-A83Z-01A 1 3 Out-of-frame Intra-chr q35.3 Oncogene q35.3 Seq+ 92051 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABR-YWHAE ABR chr17 1179667 - YWHAE chr17 1365058 - Exonic hg38 LGG TCGA-RY-A847-01A 1 1 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 92052 ChimerSeq TCGA FAWG TCGA_RNA-Seq JAZF1-AS3 JAZF1 chr7 27991909 - AS3 chr17 48603927 + Exonic hg38 LGG TCGA-S9-A6TS-01A 8 51 Out-of-frame Inter-chr p15.1 Transcription factor Tumor suppressor gene 92053 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARN-PLA2G10 PARN chr16 14552021 - PLA2G10 chr16 14672749 - Exonic hg38 LGG TCGA-S9-A6TS-01A 1 9 5'UTR-5'UTR Intra-chr Seq+ 92054 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM208B-ZMYND11 FAM208B chr10 5685175 + ZMYND11 chr10 209889 + Exonic hg38 LGG TCGA-S9-A6TU-01A 1 2 Out-of-frame Intra-chr p15.1 p15.3 Tumor suppressor gene 92055 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMCC2-MNAT1 TMCC2 chr1 205242044 + MNAT1 chr14 60796217 + Exonic hg38 LGG TCGA-S9-A6TY-01A 1 1 Out-of-frame Inter-chr q32.1 q23.1 Seq+ 92056 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K10-SUPT5H MAP3K10 chr19 40206157 + SUPT5H chr19 39457675 + Exonic hg38 LGG TCGA-S9-A6U0-01A 11 24 In-Frame Intra-chr q13.2 q13.2 Seq+ 92057 ChimerSeq TCGA FAWG TCGA_RNA-Seq THAP4-DOCK10 THAP4 chr2 241601896 - DOCK10 chr2 224896377 - Exonic hg38 LGG TCGA-S9-A6U6-01A 1 11 In-Frame Intra-chr q37.3 Transcription factor q36.2 Seq+ 92058 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARPP21-FRMD4A ARPP21 chr3 35683815 + FRMD4A chr10 14083813 - Exonic hg38 LGG TCGA-S9-A6U6-01A 1 6 CDS-3'UTR Inter-chr p22.3 p13 92059 ChimerSeq TCGA FAWG TCGA_RNA-Seq D2HGDH-CUL3 D2HGDH chr2 241735516 + CUL3 chr2 224511582 - Exonic hg38 LGG TCGA-S9-A6U6-01A 1 6 Out-of-frame Intra-chr q37.3 q36.2 Seq+ 92060 ChimerSeq TCGA FAWG TCGA_RNA-Seq KHDRBS3-CMTM6 KHDRBS3 chr8 135557587 + CMTM6 chr3 32488036 - Exonic hg38 LGG TCGA-S9-A6U6-01A 1 5 Out-of-frame Inter-chr q24.23 p22.3 92061 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOR1A-ADD1 TOR1A chr9 129818520 - ADD1 chr4 2928171 + Exonic hg38 LGG TCGA-S9-A6U9-01A 1 1 In-Frame Inter-chr q34.11 p16.3 92062 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC127-SDHA CCDC127 chr5 216729 - SDHA chr5 233477 + Exonic hg38 LGG TCGA-S9-A6UA-01A 11 24 In-Frame Intra-chr p15.33 p15.33 Oncogene Tumor suppressor gene Seq+ 92063 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPS7A-GNB3 COPS7A chr12 6730820 + GNB3 chr12 6845586 + Exonic hg38 LGG TCGA-S9-A6UA-01A 2 13 Out-of-frame Intra-chr p13.31 p13.31 Seq+ 92064 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOB3B-SLC24A2 MOB3B chr9 27529555 - SLC24A2 chr9 19622299 - Exonic hg38 LGG TCGA-S9-A6UA-01A 3 7 5'UTR-CDS Intra-chr p21.2 p22.1 Seq+ 92065 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPLX1-GAK CPLX1 chr4 824492 - GAK chr4 851084 - Exonic hg38 LGG TCGA-S9-A6WE-01A 3 35 In-Frame Intra-chr p16.3 p16.3 Other:NAK Seq+ 92066 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP32-SPANXN4 USP32 chr17 60345481 - SPANXN4 chrX 143034025 + Exonic hg38 LGG TCGA-S9-A6WG-01A 2 11 In-Frame Inter-chr q23.2 q27.3 Seq+ 92067 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A19-EXOC7 SLC25A19 chr17 75283423 - EXOC7 chr17 76120454 - Exonic hg38 LGG TCGA-S9-A6WM-01A 21 83 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 92068 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF564-CACNA1A ZNF564 chr19 12551330 - CACNA1A chr19 13286966 - Exonic hg38 LGG TCGA-S9-A6WM-01A 4 9 Out-of-frame Intra-chr p13.2 Transcription factor p13.13 Seq+ 92069 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRELD1-FANCD2 CRELD1 chr3 9943515 + FANCD2 chr3 10092181 + Exonic hg38 LGG TCGA-S9-A6WM-01A 1 15 Out-of-frame Intra-chr p25.3 p25.3 Oncogene 92070 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBTD2-BOD1 UBTD2 chr5 172283596 - BOD1 chr5 173613255 - Exonic hg38 LGG TCGA-S9-A6WM-01A 1 4 Out-of-frame Intra-chr q35.1 q35.2 92071 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGFR-VSTM2A EGFR chr7 55202625 + VSTM2A chr7 54569131 + Exonic hg38 LGG TCGA-S9-A6WM-01A 1 2 In-Frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 Seq+ 92072 ChimerSeq TCGA FAWG TCGA_RNA-Seq BHLHE41-RERGL BHLHE41 chr12 26124718 - RERGL chr12 18143293 - Exonic hg38 LGG TCGA-S9-A6WO-01A 4 13 CDS-5'UTR Intra-chr p12.1 Tumor suppressor gene Transcription factor p12.3 Seq+ 92073 ChimerSeq TCGA FAWG TCGA_RNA-Seq LNX1-SOD3 LNX1 chr4 53557874 - SOD3 chr4 24799506 + Exonic hg38 LGG TCGA-S9-A7IS-01A 2 6 CDS-5'UTR Intra-chr q12 p15.2 92074 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHLPP1-ADAMTS13 PHLPP1 chr18 62717259 + ADAMTS13 chr9 133423101 + Exonic hg38 LGG TCGA-S9-A7J0-01A 2 12 CDS-3'UTR Inter-chr q21.33 Tumor suppressor gene Seq+ 92075 ChimerSeq TCGA FAWG TCGA_RNA-Seq UMPS-ERC2 UMPS chr3 124738239 + ERC2 chr3 56019031 - Exonic hg38 LGG TCGA-S9-A7J0-01A 2 3 Out-of-frame Intra-chr q21.2 p14.3 Seq+ 92076 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMC1-ERC2 CMC1 chr3 28263380 + ERC2 chr3 56173520 - Exonic hg38 LGG TCGA-S9-A7J0-01A 1 5 Out-of-frame Intra-chr p24.1 p14.3 Seq+ 92077 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX4-OSBPL10 SNX4 chr3 125497341 - OSBPL10 chr3 31879830 - Exonic hg38 LGG TCGA-S9-A7J0-01A 1 2 Out-of-frame Intra-chr q21.2 p22.3 92078 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4C-PHF24 KDM4C chr9 6893232 + PHF24 chr9 34976152 + Exonic hg38 LGG TCGA-S9-A7R1-01A 2 6 In-Frame Intra-chr p24.1 p13.3 92079 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP23-HIGD1C ATP23 chr12 57947076 + HIGD1C chr12 50960968 + Exonic hg38 LGG TCGA-S9-A7R2-01A 3 32 5'UTR-CDS Intra-chr q13.12 92080 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARS-OS9 MARS chr12 57515991 + OS9 chr12 57715760 + Exonic hg38 LGG TCGA-S9-A7R2-01A 3 0 In-Frame Intra-chr q13.3 q13.3 92081 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO6-HNRNPUL1 ANO6 chr12 45216391 + HNRNPUL1 chr19 41268223 + Exonic hg38 LGG TCGA-S9-A7R3-01A 11 28 In-Frame Inter-chr q12 q13.2 Seq+ 92082 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCERG1L-CNTN1 TCERG1L chr10 131308211 - CNTN1 chr12 40908357 + Exonic hg38 LGG TCGA-S9-A7R3-01A 6 11 CDS-5'UTR Inter-chr q26.3 q12 Seq+ 92083 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERCC2-C12orf40 ERCC2 chr19 45368930 - C12orf40 chr12 39716756 + Exonic hg38 LGG TCGA-S9-A7R3-01A 3 4 Out-of-frame Inter-chr q13.32 Oncogene q12 Seq+ 92084 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBFOX2-MPPED1 RBFOX2 chr22 35938847 - MPPED1 chr22 43474736 + Exonic hg38 LGG TCGA-S9-A7R7-01A 4 18 5'UTR-CDS Intra-chr q13.2 Seq+ 92085 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBFB-COG4 CBFB chr16 67066798 + COG4 chr16 70519731 - Exonic hg38 LGG TCGA-S9-A7R7-01A 2 5 In-Frame Intra-chr q22.1 q22.1 Seq+ 92086 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKTIP-COTL1 AKTIP chr16 53503147 - COTL1 chr16 84566955 - Exonic hg38 LGG TCGA-S9-A7R7-01A 2 4 5'UTR-CDS Intra-chr q12.2 q24.1 Seq+ 92087 ChimerSeq TCGA FAWG TCGA_RNA-Seq LBHD1-BSCL2 LBHD1 chr11 62669641 - BSCL2 chr11 62694711 - Exonic hg38 LGG TCGA-S9-A7R8-01A 8 14 Out-of-frame Intra-chr q12.3 q12.3 92088 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF133-MS4A4A ZNF133 chr20 18288604 + MS4A4A chr11 60292225 + Exonic hg38 LGG TCGA-S9-A89V-01A 6 13 Out-of-frame Inter-chr p11.23 Transcription factor q12.2 Seq+ 92089 ChimerSeq TCGA FAWG TCGA_RNA-Seq FASTK-GNGT1 FASTK chr7 151077310 - GNGT1 chr7 93910790 + Exonic hg38 LGG TCGA-S9-A89Z-01A 5 10 Out-of-frame Intra-chr q36.1 Atypical:FAST q21.3 Seq+ 92090 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIT-HOPX KIT chr4 54658081 + HOPX chr4 56656012 - Exonic hg38 LGG TCGA-S9-A89Z-01A 2 7 Out-of-frame Intra-chr q12 TK:PDGFR Oncogene q12 Tumor suppressor gene Seq+ 92091 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP135-POLR2B CEP135 chr4 55981379 + POLR2B chr4 56999617 + Exonic hg38 LGG TCGA-S9-A89Z-01A 2 2 In-Frame Intra-chr q12 q12 Seq+ 92092 ChimerSeq TCGA FAWG TCGA_RNA-Seq LONP2-CHRM3 LONP2 chr16 48334358 + CHRM3 chr1 239907433 + Exonic hg38 LGG TCGA-S9-A89Z-01A 1 5 CDS-5'UTR Inter-chr q12.1 q43 Seq+ 92093 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR2B-CEP135 POLR2B chr4 56995409 + CEP135 chr4 55985281 + Exonic hg38 LGG TCGA-S9-A89Z-01A 1 4 In-Frame Intra-chr q12 q12 Seq+ 92094 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMCC2-MNAT1 TMCC2 chr1 205242044 + MNAT1 chr14 60796217 + Exonic hg38 LGG TCGA-TM-A7C3-01A 7 80 Out-of-frame Inter-chr q32.1 q23.1 Seq+ 92095 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPBP1L1-PVR GPBP1L1 chr1 45659028 - PVR chr19 44649809 + Exonic hg38 LGG TCGA-TM-A7C3-01A 4 21 Out-of-frame Inter-chr p34.1 Transcription factor q13.31 Seq+ 92096 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R3C-SPTSSA PPP2R3C chr14 35099252 - SPTSSA chr14 34435304 - Exonic hg38 LGG TCGA-TM-A7C3-01A 3 17 In-Frame Intra-chr q13.2 q13.1 Seq+ 92097 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF5A-TSPAN31 KIF5A chr12 57564973 + TSPAN31 chr12 57746589 + Exonic hg38 LGG TCGA-TM-A7C3-01A 2 16 In-Frame Intra-chr q13.3 q14.1 Seq+ 92098 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOVA1-DTD2 NOVA1 chr14 26595410 - DTD2 chr14 31453344 - Exonic hg38 LGG TCGA-TM-A7C3-01A 2 11 Out-of-frame Intra-chr q12 q12 Seq+ 92099 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYT16-PRELP SYT16 chr14 61812810 + PRELP chr1 203483169 + Exonic hg38 LGG TCGA-TM-A7C3-01A 1 6 5'UTR-5'UTR Inter-chr q23.2 q32.1 92100 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF7-PKIB ARHGEF7 chr13 111153991 + PKIB chr6 122717787 + Exonic hg38 LGG TCGA-TM-A7CA-01A 1 5 Out-of-frame Inter-chr q34 q22.31 Seq+ 92101 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2-DCAF17 MAP2 chr2 209625129 + DCAF17 chr2 171448681 + Exonic hg38 LGG TCGA-TM-A7CA-01A 1 5 5'UTR-5'UTR Intra-chr q34 q31.1 92102 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOT1L-TECR DOT1L chr19 2194577 + TECR chr19 14562525 + Exonic hg38 LGG TCGA-TM-A7CF-01A 62 142 In-Frame Intra-chr p13.3 Oncogene Transcription factor p13.12 Seq+ 92103 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS52-ZNF358 VPS52 chr6 33263484 - ZNF358 chr19 7519205 + Exonic hg38 LGG TCGA-TM-A7CF-01A 7 54 5'UTR-5'UTR Inter-chr p13.2 Transcription factor Seq+ 92104 ChimerSeq TCGA FAWG TCGA_RNA-Seq COLGALT1-COPE COLGALT1 chr19 17560465 + COPE chr19 18911071 - Exonic hg38 LGG TCGA-TM-A7CF-01A 12 28 In-Frame Intra-chr p13.11 p13.11 92105 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB7A-CYP4F3 ZBTB7A chr19 4044975 - CYP4F3 chr19 15661236 + Exonic hg38 LGG TCGA-TM-A7CF-01A 5 51 Out-of-frame Intra-chr p13.3 Transcription factor p13.12 Seq+ 92106 ChimerSeq TCGA FAWG TCGA_RNA-Seq VEGFA-STK38 VEGFA chr6 43777665 + STK38 chr6 36499990 - Exonic hg38 LGG TCGA-TM-A7CF-01A 3 29 In-Frame Intra-chr p21.1 Tumor suppressor gene p21.31 Seq+ 92107 ChimerSeq TCGA FAWG TCGA_RNA-Seq FZR1-TBC1D17 FZR1 chr19 3532650 + TBC1D17 chr19 49887476 + Exonic hg38 LGG TCGA-TM-A7CF-01A 6 15 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene q13.33 Seq+ 92108 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANBP3-ALDH16A1 RANBP3 chr19 5978061 - ALDH16A1 chr19 49458486 + Exonic hg38 LGG TCGA-TM-A7CF-01A 6 7 Out-of-frame Intra-chr p13.3 q13.33 Seq+ 92109 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELF5-RDH8 CELF5 chr19 3225618 + RDH8 chr19 10017057 + Exonic hg38 LGG TCGA-TM-A7CF-01A 6 6 5'UTR-CDS Intra-chr p13.3 p13.2 Seq+ 92110 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS15L1-ZNF451 EPS15L1 chr19 16385129 - ZNF451 chr6 57153861 + Exonic hg38 LGG TCGA-TM-A7CF-01A 4 13 In-Frame Inter-chr p13.11 p12.1 Transcription factor Seq+ 92111 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAF1-ETV7 SCAF1 chr19 49652669 + ETV7 chr6 36375601 - Exonic hg38 LGG TCGA-TM-A7CF-01A 3 17 Out-of-frame Inter-chr q13.33 p21.31 Transcription factor Seq+ 92112 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF253-HSD17B14 ZNF253 chr19 19865999 + HSD17B14 chr19 48834358 - Exonic hg38 LGG TCGA-TM-A7CF-01A 5 9 Out-of-frame Intra-chr p13.11 Transcription factor q13.33 Seq+ 92113 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF292-GRM4 ZNF292 chr6 87155759 + GRM4 chr6 34133859 - Exonic hg38 LGG TCGA-TM-A7CF-01A 4 8 5'UTR-5'UTR Intra-chr q14.3 Tumor suppressor gene Transcription factor p21.31 Seq+ 92114 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNG7-LSM7 GNG7 chr19 2702646 - LSM7 chr19 2324196 - Exonic hg38 LGG TCGA-TM-A7CF-01A 4 6 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 92115 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGPAT1-HECA AGPAT1 chr6 32175814 - HECA chr6 139166284 + Exonic hg38 LGG TCGA-TM-A7CF-01A 3 9 5'UTR-CDS Intra-chr q24.1 Tumor suppressor gene Seq+ 92116 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCF1-SHC2 ABCF1 chr6 30586711 + SHC2 chr19 440932 - Exonic hg38 LGG TCGA-TM-A7CF-01A 2 12 3'UTR-CDS Inter-chr p13.3 Seq+ 92117 ChimerSeq TCGA FAWG TCGA_RNA-Seq COLGALT1-LY6G5B COLGALT1 chr19 17568713 + LY6G5B chr6 31671156 + Exonic hg38 LGG TCGA-TM-A7CF-01A 3 6 CDS-3'UTR Inter-chr p13.11 92118 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYDGF-FAM187B MYDGF chr19 4659931 - FAM187B chr19 35225212 - Exonic hg38 LGG TCGA-TM-A7CF-01A 3 5 Out-of-frame Intra-chr p13.3 q13.12 92119 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF8-COL5A3 TAF8 chr6 42077239 + COL5A3 chr19 10006231 - Exonic hg38 LGG TCGA-TM-A7CF-01A 3 4 Out-of-frame Inter-chr p21.1 p13.2 Seq+ 92120 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF433-RFX1 ZNF433 chr19 12035537 - RFX1 chr19 13980689 - Exonic hg38 LGG TCGA-TM-A7CF-01A 2 8 In-Frame Intra-chr p13.2 Transcription factor p13.12 Transcription factor Seq+ 92121 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC1-SH3GL1 LRRC1 chr6 53842227 + SH3GL1 chr19 4366994 - Exonic hg38 LGG TCGA-TM-A7CF-01A 1 10 Out-of-frame Inter-chr p12.1 p13.3 Seq+ 92122 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHERP-RHAG CHERP chr19 16541870 - RHAG chr6 49619362 - Exonic hg38 LGG TCGA-TM-A7CF-01A 1 9 In-Frame Inter-chr p13.11 p12.3 Seq+ 92123 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKIRIN2-CUL7 AKIRIN2 chr6 87701450 - CUL7 chr6 43052796 - Exonic hg38 LGG TCGA-TM-A7CF-01A 2 4 In-Frame Intra-chr q15 p21.1 Seq+ 92124 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED26-TMEM221 MED26 chr19 16627872 - TMEM221 chr19 17445284 - Exonic hg38 LGG TCGA-TM-A7CF-01A 2 4 Out-of-frame Intra-chr p13.11 p13.11 92125 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3GL1-RUVBL2 SH3GL1 chr19 4390052 - RUVBL2 chr19 49010999 + Exonic hg38 LGG TCGA-TM-A7CF-01A 1 8 CDS-5'UTR Intra-chr p13.3 q13.33 Seq+ 92126 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCSH-ZNF826P PRKCSH chr19 11442515 + ZNF826P chr19 20409045 - Exonic hg38 LGG TCGA-TM-A7CF-01A 1 7 CDS-3'UTR Intra-chr p13.2 p12 92127 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMBRD1-ZBTB45 LMBRD1 chr6 69796813 - ZBTB45 chr19 58517673 - Exonic hg38 LGG TCGA-TM-A7CF-01A 1 4 CDS-5'UTR Inter-chr q13 q13.43 Transcription factor Seq+ 92128 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF266-SMARCA4 ZNF266 chr19 9434065 - SMARCA4 chr19 11019591 + Exonic hg38 LGG TCGA-TM-A7CF-01A 1 4 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.2 Oncogene Tumor suppressor gene 92129 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGO2-DNAH10 AGO2 chr8 140547468 - DNAH10 chr12 123893233 + Exonic hg38 LGG TCGA-TM-A7CF-01A 1 3 CDS-3'UTR Inter-chr q24.3 92130 ChimerSeq TCGA FAWG TCGA_RNA-Seq NTRK3-PEAK1 NTRK3 chr15 88183418 - PEAK1 chr15 77115319 - Exonic hg38 LGG TCGA-TM-A7CF-01A 1 3 Out-of-frame Intra-chr q25.3 Oncogene Tumor suppressor gene q24.3 92131 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCA4-SMIM7 SMARCA4 chr19 10996544 + SMIM7 chr19 16647261 - Exonic hg38 LGG TCGA-TM-A7CF-01A 1 3 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.11 92132 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF527-SMIM7 ZNF527 chr19 37380372 + SMIM7 chr19 16631724 - Exonic hg38 LGG TCGA-TM-A7CF-01A 1 3 CDS-3'UTR Intra-chr q13.12 Transcription factor p13.11 92133 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF540-SIPA1L3 ZNF540 chr19 37551665 + SIPA1L3 chr19 38162253 + Exonic hg38 LGG TCGA-TM-A7CF-01A 1 3 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.13 92134 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD5-ARNT2 FRMD5 chr15 44194953 - ARNT2 chr15 80450880 + Exonic hg38 LGG TCGA-TM-A7CF-01A 1 2 Out-of-frame Intra-chr q15.3 q25.1 Transcription factor Seq+ 92135 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKHD1-ESR1 PKHD1 chr6 51847775 - ESR1 chr6 151880655 + Exonic hg38 LGG TCGA-TM-A7CF-01A 1 2 In-Frame Intra-chr p12.2 Oncogene q25.1 Oncogene Tumor suppressor gene Transcription factor 92136 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN9-CSPG4 PTPN9 chr15 75523121 - CSPG4 chr15 75683041 - Exonic hg38 LGG TCGA-TM-A7CF-01A 1 2 Out-of-frame Intra-chr q24.2 q24.2 92137 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOB3A-PRDM13 MOB3A chr19 2076811 - PRDM13 chr6 99613033 + Exonic hg38 LGG TCGA-TM-A7CF-01A 1 1 Out-of-frame Inter-chr p13.3 q16.2 Transcription factor 92138 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-FBXO28 FGFR3 chr4 1806934 + FBXO28 chr1 224153142 + Exonic hg38 LGG TCGA-TM-A84B-01A 330 1829 In-Frame Inter-chr p16.3 TK:FGFR Oncogene q42.11 Seq+ 92139 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM2-KIF5A R3HDM2 chr12 57395749 - KIF5A chr12 57563439 + Exonic hg38 LGG TCGA-TM-A84B-01A 222 786 5'UTR-CDS Intra-chr q13.3 q13.3 Seq+ 92140 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCYAP1R1-AQP1 ADCYAP1R1 chr7 31052678 + AQP1 chr7 30922066 + Exonic hg38 LGG TCGA-TM-A84B-01A 181 361 5'UTR-CDS Intra-chr p14.3 p14.3 Seq+ 92141 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL21B-GLI1 METTL21B chr12 57773128 + GLI1 chr12 57463665 + Exonic hg38 LGG TCGA-TM-A84B-01A 106 527 Out-of-frame Intra-chr q13.3 Tumor suppressor gene Transcription factor Seq+ 92142 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMOD3-TACC3 TMOD3 chr15 51869373 + TACC3 chr4 1744518 + Exonic hg38 LGG TCGA-TM-A84B-01A 127 276 Out-of-frame Inter-chr q21.2 p16.3 Seq+ 92143 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF345-LGALS13 ZNF345 chr19 36851904 + LGALS13 chr19 39605178 + Exonic hg38 LGG TCGA-TM-A84B-01A 72 322 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.2 Seq+ 92144 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF529-IGSF23 ZNF529 chr19 36605126 - IGSF23 chr19 44623703 + Exonic hg38 LGG TCGA-TM-A84B-01A 60 336 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.31 Seq+ 92145 ChimerSeq TCGA FAWG TCGA_RNA-Seq CENPBD1P1-WDR62 CENPBD1P1 chr19 58575588 + WDR62 chr19 36092689 + Exonic hg38 LGG TCGA-TM-A84B-01A 24 93 5'UTR-CDS Intra-chr q13.43 q13.12 92146 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNIK-KCNMB2 TNIK chr3 171369620 - KCNMB2 chr3 178807343 + Exonic hg38 LGG TCGA-TM-A84B-01A 10 30 CDS-5'UTR Intra-chr q26.31 STE:STE20 q26.32 Seq+ 92147 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF235-ZNF865 ZNF235 chr19 44298820 - ZNF865 chr19 55613593 + Exonic hg38 LGG TCGA-TM-A84B-01A 5 27 CDS-5'UTR Intra-chr q13.31 Transcription factor q13.42 Transcription factor 92148 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHO2-TRIP4 PLEKHO2 chr15 64861575 + TRIP4 chr15 64445006 + Exonic hg38 LGG TCGA-TM-A84B-01A 5 21 In-Frame Intra-chr q22.31 q22.31 Seq+ 92149 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR62-TRAPPC6A WDR62 chr19 36089306 + TRAPPC6A chr19 45164970 - Exonic hg38 LGG TCGA-TM-A84B-01A 5 18 In-Frame Intra-chr q13.12 q13.32 Seq+ 92150 ChimerSeq TCGA FAWG TCGA_RNA-Seq LGALS13-PTPRH LGALS13 chr19 39605388 + PTPRH chr19 55188168 - Exonic hg38 LGG TCGA-TM-A84B-01A 1 14 Out-of-frame Intra-chr q13.2 q13.42 Seq+ 92151 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNIK-DGCR8 TNIK chr3 171123596 - DGCR8 chr22 20106177 + Exonic hg38 LGG TCGA-TM-A84B-01A 2 8 Out-of-frame Inter-chr q26.31 STE:STE20 q11.21 Seq+ 92152 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAALADL2-TIGIT NAALADL2 chr3 174737746 + TIGIT chr3 114299597 + Exonic hg38 LGG TCGA-TM-A84B-01A 1 11 5'UTR-CDS Intra-chr q26.31 q13.31 Seq+ 92153 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF345-PTPRH ZNF345 chr19 36851904 + PTPRH chr19 55188168 - Exonic hg38 LGG TCGA-TM-A84B-01A 2 7 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.42 Seq+ 92154 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC7A1-USPL1 SLC7A1 chr13 29553761 - USPL1 chr13 30621764 + Exonic hg38 LGG TCGA-TM-A84B-01A 2 4 5'UTR-5'UTR Intra-chr q12.3 q12.3 Seq+ 92155 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL27-NBR1 RPL27 chr17 43000102 + NBR1 chr17 43209901 + Exonic hg38 LGG TCGA-TM-A84F-01A 1 1 Out-of-frame Intra-chr q21.31 q21.31 92156 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNB1-ZFPM2 KCNB1 chr20 49481914 - ZFPM2 chr8 105419144 + Exonic hg38 LGG TCGA-TM-A84H-01A 3 10 Out-of-frame Inter-chr q13.13 q22.3 Transcription factor Seq+ 92157 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPC4AP-KCNB1 TRPC4AP chr20 35069296 - KCNB1 chr20 49374992 - Exonic hg38 LGG TCGA-TM-A84H-01A 2 11 In-Frame Intra-chr q11.22 q13.13 Seq+ 92158 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRT-OSGIN2 PTPRT chr20 42315723 - OSGIN2 chr8 89909567 + Exonic hg38 LGG TCGA-TM-A84H-01A 1 3 Out-of-frame Inter-chr q13.11 Oncogene Tumor suppressor gene q21.3 92159 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPNE3-ANGPT1 CPNE3 chr8 86548434 + ANGPT1 chr8 107497506 - Exonic hg38 LGG TCGA-TM-A84H-01A 1000 1000 Out-of-frame Intra-chr q21.3 q23.1 92160 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCY9-TEAD4 ADCY9 chr16 4113750 - TEAD4 chr12 2994738 + Exonic hg38 LGG TCGA-TM-A84I-01A 61 263 CDS-5'UTR Inter-chr p13.3 p13.33 Transcription factor Seq+ 92161 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARCH9-SLCO1B1 2019_ 3_ 9_ chr12 57757084 + SLCO1B1 chr12 21172650 + Exonic hg38 LGG TCGA-TM-A84I-01A 36 135 Out-of-frame Intra-chr q14.1 p12.1 Seq+ 92162 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNF-NOL4 CCNF chr16 2439826 + NOL4 chr18 34093597 - Exonic hg38 LGG TCGA-TM-A84I-01A 10 144 In-Frame Inter-chr p13.3 q12.1 Seq+ 92163 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT1-TAF4B GALNT1 chr18 35654801 + TAF4B chr18 26357690 + Exonic hg38 LGG TCGA-TM-A84I-01A 31 39 Out-of-frame Intra-chr q12.2 q11.2 Seq+ 92164 ChimerSeq TCGA FAWG TCGA_RNA-Seq LYST-NARS2 LYST chr1 235866843 - NARS2 chr11 78466013 - Exonic hg38 LGG TCGA-TM-A84I-01A 32 16 5'UTR-CDS Inter-chr q42.3 q14.1 Seq+ 92165 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST8SIA1-FTO ST8SIA1 chr12 22249006 - FTO chr16 54111762 + Exonic hg38 LGG TCGA-TM-A84I-01A 7 46 In-Frame Inter-chr p12.1 q12.2 Seq+ 92166 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF4B-MIR4300HG EIF4B chr12 53022627 + MIR4300HG chr11 82356628 - Exonic hg38 LGG TCGA-TM-A84I-01A 9 9 CDS-3'UTR Inter-chr q13.13 q14.1 92167 ChimerSeq TCGA FAWG TCGA_RNA-Seq NTHL1-KLRC3 NTHL1 chr16 2047709 - KLRC3 chr12 10412616 - Exonic hg38 LGG TCGA-TM-A84I-01A 4 24 Out-of-frame Inter-chr p13.3 p13.2 Seq+ 92168 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD17-CNTN5 RAD17 chr5 69382057 + CNTN5 chr11 100356117 + Exonic hg38 LGG TCGA-TM-A84I-01A 4 23 3'UTR-CDS Inter-chr q22.1 Seq+ 92169 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAML2-ANKMY2 MAML2 chr11 96341383 - ANKMY2 chr7 16627178 - Exonic hg38 LGG TCGA-TM-A84I-01A 5 18 In-Frame Inter-chr q21 Oncogene p21.1 Seq+ 92170 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGBD2-UBE4A PGBD2 chr1 248917401 + UBE4A chr11 118382589 + Exonic hg38 LGG TCGA-TM-A84I-01A 7 6 Out-of-frame Inter-chr q44 q23.3 Seq+ 92171 ChimerSeq TCGA FAWG TCGA_RNA-Seq CORO7-TRAF7 CORO7 chr16 4387986 - TRAF7 chr16 2163883 + Exonic hg38 LGG TCGA-TM-A84I-01A 3 15 5'UTR-5'UTR Intra-chr p13.3 p13.3 Oncogene Seq+ 92172 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRIN2A-RASSF8 GRIN2A chr16 10179998 - RASSF8 chr12 26055279 + Exonic hg38 LGG TCGA-TM-A84I-01A 1 21 CDS-5'UTR Inter-chr p13.2 Tumor suppressor gene p12.1 Tumor suppressor gene Seq+ 92173 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR4300HG-MS4A4A MIR4300HG chr11 82356512 - MS4A4A chr11 60292225 + Exonic hg38 LGG TCGA-TM-A84I-01A 4 9 3'UTR-CDS Intra-chr q14.1 q12.2 92174 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTX3-PLEKHA5 DTX3 chr12 57604858 + PLEKHA5 chr12 19320562 + Exonic hg38 LGG TCGA-TM-A84I-01A 4 4 5'UTR-CDS Intra-chr q13.3 p12.3 Seq+ 92175 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETNK1-AK6P1 ETNK1 chr12 22644022 + AK6P1 chr12 34249756 + Exonic hg38 LGG TCGA-TM-A84I-01A 4 4 Out-of-frame Intra-chr p12.1 p11.1 92176 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAAF1-ALG1 PAAF1 chr11 73919032 + ALG1 chr16 5072951 + Exonic hg38 LGG TCGA-TM-A84I-01A 3 3 In-Frame Inter-chr q13.4 p13.3 92177 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB6A-B4GALNT3 RAB6A chr11 73707420 - B4GALNT3 chr12 535166 + Exonic hg38 LGG TCGA-TM-A84I-01A 1 9 Out-of-frame Inter-chr q13.4 p13.33 Seq+ 92178 ChimerSeq TCGA FAWG TCGA_RNA-Seq EP400NL-GPBP1 EP400NL chr12 132121980 + GPBP1 chr5 57230846 + Exonic hg38 LGG TCGA-TM-A84I-01A 1 5 Out-of-frame Inter-chr q24.33 q11.2 Transcription factor Seq+ 92179 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN5-EMCN TSPAN5 chr4 98658146 - EMCN chr4 100423404 - Exonic hg38 LGG TCGA-TM-A84I-01A 1 3 Out-of-frame Intra-chr q23 q24 Seq+ 92180 ChimerSeq TCGA FAWG TCGA_RNA-Seq AEBP2-FLYWCH2 AEBP2 chr12 19440370 + FLYWCH2 chr16 2899049 + Exonic hg38 LGG TCGA-TM-A84I-01A 1 2 Out-of-frame Inter-chr p12.3 Transcription factor p13.3 92181 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCD-SEC61A2 SCD chr10 100356764 + SEC61A2 chr10 12149595 + Exonic hg38 LGG TCGA-TM-A84J-01A 67 879 In-Frame Intra-chr q24.31 p14 Seq+ 92182 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDGFB-DGCR2 PDGFB chr22 39230084 - DGCR2 chr22 19089490 - Exonic hg38 LGG TCGA-TM-A84J-01A 142 514 In-Frame Intra-chr q13.1 Oncogene q11.21 Seq+ 92183 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF239-SEC31B ZNF239 chr10 43567899 - SEC31B chr10 100497280 - Exonic hg38 LGG TCGA-TM-A84J-01A 79 243 In-Frame Intra-chr q11.21 Transcription factor q24.31 Seq+ 92184 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPHB2-NTRK1 EPHB2 chr1 22785076 + NTRK1 chr1 156873633 + Exonic hg38 LGG TCGA-TM-A84J-01A 27 167 In-Frame Intra-chr p36.12 Tumor suppressor gene q23.1 Oncogene Seq+ 92185 ChimerSeq TCGA FAWG TCGA_RNA-Seq CWF19L1-HSPA12A CWF19L1 chr10 100267571 - HSPA12A chr10 116707285 - Exonic hg38 LGG TCGA-TM-A84J-01A 25 103 Out-of-frame Intra-chr q24.31 q25.3 Seq+ 92186 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCT3-ZBTB40 CCT3 chr1 156309203 - ZBTB40 chr1 22489880 + Exonic hg38 LGG TCGA-TM-A84J-01A 25 75 CDS-5'UTR Intra-chr q22 p36.12 Transcription factor Seq+ 92187 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB40-PRCC ZBTB40 chr1 22452004 + PRCC chr1 156782282 + Exonic hg38 LGG TCGA-TM-A84J-01A 26 47 5'UTR-CDS Intra-chr p36.12 Transcription factor q23.1 Seq+ 92188 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXNB2-SMPD4P1 PLXNB2 chr22 50283337 - SMPD4P1 chr22 20613735 - Exonic hg38 LGG TCGA-TM-A84J-01A 8 39 Out-of-frame Intra-chr q13.33 q11.21 Seq+ 92189 ChimerSeq TCGA FAWG TCGA_RNA-Seq LUZP1-SORL1 LUZP1 chr1 23168766 - SORL1 chr11 121470007 + Exonic hg38 LGG TCGA-TM-A84J-01A 10 17 5'UTR-CDS Inter-chr p36.12 q24.1 Seq+ 92190 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPTXR-PDXP NPTXR chr22 38843235 - PDXP chr22 37665555 + Exonic hg38 LGG TCGA-TM-A84J-01A 2 42 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 92191 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPTXR-SH3BP1 NPTXR chr22 38843235 - SH3BP1 chr22 37665555 + Exonic hg38 LGG TCGA-TM-A84J-01A 2 42 CDS-3'UTR Intra-chr q13.1 q13.1 Seq+ 92192 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEF2D-SORL1 MEF2D chr1 156500486 - SORL1 chr11 121553937 + Exonic hg38 LGG TCGA-TM-A84J-01A 4 10 5'UTR-CDS Inter-chr q22 Transcription factor q24.1 Seq+ 92193 ChimerSeq TCGA FAWG TCGA_RNA-Seq CABIN1-CHEK2P4 CABIN1 chr22 24011367 + CHEK2P4 chr22 16508162 + Exonic hg38 LGG TCGA-TM-A84J-01A 5 3 Out-of-frame Intra-chr q11.1 Seq+ 92194 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRZ1-CPED1 PTPRZ1 chr7 121873557 + CPED1 chr7 121295440 + Exonic hg38 LGG TCGA-TM-A84J-01A 1 17 Out-of-frame Intra-chr q31.32 q31.31 92195 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPTXR-LGALS1 NPTXR chr22 38843235 - LGALS1 chr22 37676986 + Exonic hg38 LGG TCGA-TM-A84J-01A 2 11 In-Frame Intra-chr q13.1 q13.1 Seq+ 92196 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMI1-SEC61A2 BMI1 chr10 22321696 + SEC61A2 chr10 12156907 + Exonic hg38 LGG TCGA-TM-A84J-01A 1 7 5'UTR-5'UTR Intra-chr p12.2 p14 92197 ChimerSeq TCGA FAWG TCGA_RNA-Seq SORL1-RHBG SORL1 chr11 121497049 + RHBG chr1 156382748 + Exonic hg38 LGG TCGA-TM-A84J-01A 1 6 Out-of-frame Inter-chr q24.1 q22 Seq+ 92198 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6R2-GRK3 PPP6R2 chr22 50343550 + GRK3 chr22 25661576 + Exonic hg38 LGG TCGA-TM-A84J-01A 2 1 5'UTR-5'UTR Intra-chr q13.33 q12.1 92199 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL24-CCT3 MRPL24 chr1 156737646 - CCT3 chr1 156325089 - Exonic hg38 LGG TCGA-TM-A84J-01A 1 4 In-Frame Intra-chr q23.1 q22 92200 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCT3-KDM1A CCT3 chr1 156333547 - KDM1A chr1 23044427 + Exonic hg38 LGG TCGA-TM-A84J-01A 1 1 In-Frame Intra-chr q22 p36.12 92201 ChimerSeq TCGA FAWG TCGA_RNA-Seq IKBKAP-CTNNAL1 IKBKAP chr9 108922842 - CTNNAL1 chr9 108999256 - Exonic hg38 LGG TCGA-TM-A84Q-01A 1 17 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 92202 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA4-TSPAN18 LAMA4 chr6 112175313 - TSPAN18 chr11 44906407 + Exonic hg38 LGG TCGA-TQ-A7RF-01A 4 8 CDS-5'UTR Inter-chr q21 p11.2 Seq+ 92203 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK3-FAM212A DOCK3 chr3 50778758 + FAM212A chr3 49804181 + Exonic hg38 LGG TCGA-TQ-A7RF-01A 3 7 Out-of-frame Intra-chr p21.2 p21.31 Seq+ 92204 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK10-IL1RN DOCK10 chr2 224931549 - IL1RN chr2 113127689 + Exonic hg38 LGG TCGA-TQ-A7RH-01A 5 16 Out-of-frame Intra-chr q36.2 q14.1 Seq+ 92205 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3IP-GYS2 RAB3IP chr12 69739031 + GYS2 chr12 21580523 - Exonic hg38 LGG TCGA-TQ-A7RH-01A 4 15 5'UTR-CDS Intra-chr q15 p12.1 Seq+ 92206 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT2-SLCO1A2 CNOT2 chr12 70278274 + SLCO1A2 chr12 21292336 - Exonic hg38 LGG TCGA-TQ-A7RH-01A 2 4 In-Frame Intra-chr q15 p12.1 Seq+ 92207 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK1-C17orf105 TAOK1 chr17 29510992 + C17orf105 chr17 43783837 + Exonic hg38 LGG TCGA-TQ-A7RJ-01A 5 49 Out-of-frame Intra-chr q11.2 q21.31 Seq+ 92208 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFT80-RARRES1 IFT80 chr3 160375812 - RARRES1 chr3 158704927 - Exonic hg38 LGG TCGA-TQ-A7RK-01A 7 30 In-Frame Intra-chr q25.33 q25.32 Seq+ 92209 ChimerSeq TCGA FAWG TCGA_RNA-Seq RGMB-CCDC112 RGMB chr5 98774206 + CCDC112 chr5 115284908 - Exonic hg38 LGG TCGA-TQ-A7RM-01A 29 231 Out-of-frame Intra-chr q15 q22.3 Seq+ 92210 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCGF3-NPTXR PCGF3 chr4 731110 + NPTXR chr22 38828512 - Exonic hg38 LGG TCGA-TQ-A7RM-01A 16 100 5'UTR-CDS Inter-chr p16.3 q13.1 Seq+ 92211 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLEU2-ARL2BPP7 DLEU2 chr13 50068097 - ARL2BPP7 chr9 102055683 - Exonic hg38 LGG TCGA-TQ-A7RM-01A 11 16 Out-of-frame Inter-chr q14.2 Tumor suppressor gene q31.1 Seq+ 92212 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L4A-SCN9A EPB41L4A chr5 112307386 - SCN9A chr2 166251885 - Exonic hg38 LGG TCGA-TQ-A7RM-01A 3 8 In-Frame Inter-chr q22.2 q24.3 92213 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK39-TMEM245 STK39 chr2 168074982 - TMEM245 chr9 109108570 - Exonic hg38 LGG TCGA-TQ-A7RM-01A 2 9 In-Frame Inter-chr q24.3 q31.3 Seq+ 92214 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPN2-STK39 RPN2 chr20 37230059 + STK39 chr2 168167407 - Exonic hg38 LGG TCGA-TQ-A7RM-01A 3 2 In-Frame Inter-chr q11.23 q24.3 92215 ChimerSeq TCGA FAWG TCGA_RNA-Seq STRIP2-CTTNBP2 STRIP2 chr7 129460372 + CTTNBP2 chr7 117810989 - Exonic hg38 LGG TCGA-TQ-A7RM-01A 2 3 In-Frame Intra-chr q32.1 q31.31 92216 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP23-CCL18 ARHGAP23 chr17 38467331 + CCL18 chr17 36070447 + Exonic hg38 LGG TCGA-TQ-A7RP-01A 1 6 3'UTR-3'UTR Intra-chr q12 q12 Seq+ 92217 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNK2-CENPP WNK2 chr9 93290047 + CENPP chr9 92611314 + Exonic hg38 LGG TCGA-TQ-A7RR-01A 2 3 Out-of-frame Intra-chr q22.31 Tumor suppressor gene q22.31 Seq+ 92218 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCH-MNAT1 PRKCH chr14 61322464 + MNAT1 chr14 60968229 + Exonic hg38 LGG TCGA-TQ-A7RS-01A 4 13 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 92219 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC22A17-BCAN SLC22A17 chr14 23352406 - BCAN chr1 156657675 + Exonic hg38 LGG TCGA-TQ-A7RS-01A 1 1 5'UTR-CDS Inter-chr q11.2 q23.1 92220 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABI1-PTP4A3 ABI1 chr10 26823138 - PTP4A3 chr8 141421388 + Exonic hg38 LGG TCGA-TQ-A7RV-01A 5 13 3'UTR-3'UTR Inter-chr p12.1 q24.3 Seq+ 92221 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1429-SYBU KIAA1429 chr8 94534839 - SYBU chr8 109619039 - Exonic hg38 LGG TCGA-TQ-A7RV-01A 3 15 Out-of-frame Intra-chr q22.1 q23.2 Seq+ 92222 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLLT10-WAC MLLT10 chr10 21617207 + WAC chr10 28535562 + Exonic hg38 LGG TCGA-TQ-A7RV-01A 2 13 In-Frame Intra-chr p12.31 Oncogene p12.1 Seq+ 92223 ChimerSeq TCGA FAWG TCGA_RNA-Seq STIM1-ANO9 STIM1 chr11 4023987 + ANO9 chr11 434098 - Exonic hg38 LGG TCGA-TQ-A7RV-01A 1 3 Out-of-frame Intra-chr p15.4 p15.5 Seq+ 92224 ChimerSeq TCGA FAWG TCGA_RNA-Seq KYAT3-DAP3 KYAT3 chr1 88992585 - DAP3 chr1 155738157 + Exonic hg38 LGG TCGA-TQ-A7RW-01A 4 4 5'UTR-CDS Intra-chr p22.2 q22 92225 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBMXL1-DAP3 RBMXL1 chr1 88992585 - DAP3 chr1 155738157 + Exonic hg38 LGG TCGA-TQ-A7RW-01A 4 4 5'UTR-CDS Intra-chr p22.2 q22 Seq+ 92226 ChimerSeq TCGA FAWG TCGA_RNA-Seq RGMA-ADAMTSL3 RGMA chr15 93088919 - ADAMTSL3 chr15 83913092 + Exonic hg38 LGG TCGA-TQ-A7RW-01A 2 9 In-Frame Intra-chr q26.1 q25.2 Seq+ 92227 ChimerSeq TCGA FAWG TCGA_RNA-Seq COMMD6-PCDH9 COMMD6 chr13 75549323 - PCDH9 chr13 66631411 - Exonic hg38 LGG TCGA-TQ-A7RW-01A 1 9 5'UTR-CDS Intra-chr q22.2 q21.32 Tumor suppressor gene 92228 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBAP1-ADAMTSL1 UBAP1 chr9 34234340 + ADAMTSL1 chr9 18504829 + Exonic hg38 LGG TCGA-TQ-A7RW-01A 1 9 In-Frame Intra-chr p13.3 p22.2 Seq+ 92229 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC2-ATP2B3 TRAPPC2 chrX 13719871 - ATP2B3 chrX 153579978 + Exonic hg38 LGG TCGA-TQ-A8XE-01A 11 48 In-Frame Intra-chr p22.2 q28 Seq+ 92230 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLLT3-TYRP1 MLLT3 chr9 20456704 - TYRP1 chr9 12693912 + Exonic hg38 LGG TCGA-VM-A8C8-01A 3 14 CDS-5'UTR Intra-chr p21.3 p23 Seq+ 92231 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC24A-KCNK7 SEC24A chr5 134649173 + KCNK7 chr11 65593874 - Exonic hg38 LGG TCGA-VM-A8CD-01A 11 140 In-Frame Inter-chr q31.1 q13.1 Seq+ 92232 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPEN-TTC34 SPEN chr1 15876678 + TTC34 chr1 2645563 - Exonic hg38 LGG TCGA-VM-A8CD-01A 3 18 CDS-5'UTR Intra-chr p36.21 Transcription factor Seq+ 92233 ChimerSeq TCGA FAWG TCGA_RNA-Seq EYA2-LHX2 EYA2 chr20 47016297 + LHX2 chr9 124013961 + Exonic hg38 LGG TCGA-VM-A8CD-01A 3 13 Out-of-frame Inter-chr q13.12 q33.3 Transcription factor Seq+ 92234 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLU-MT2A CLU chr8 27605027 - MT2A chr16 56608592 + Exonic hg38 LGG TCGA-VM-A8CD-01A 3 7 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q13 Tumor suppressor gene 92235 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAAP1-RGAG4 CAAP1 chr9 26884810 - RGAG4 chrX 72127710 - Exonic hg38 LGG TCGA-VM-A8CF-01A 2 2 Out-of-frame Inter-chr p21.2 92236 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM5C-MAGT1 KDM5C chrX 53193437 - MAGT1 chrX 77830895 - Exonic hg38 LGG TCGA-VV-A86M-01A 3 3 Out-of-frame Intra-chr p11.22 Oncogene q21.1 Seq+ 92237 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R2B-DPYSL3 PPP2R2B chr5 146878002 - DPYSL3 chr5 147424963 - Exonic hg38 LGG TCGA-VW-A8FI-01A 7 47 Out-of-frame Intra-chr q32 q32 Seq+ 92238 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSFM-DCTN2 TSFM chr12 57793073 + DCTN2 chr12 57535845 - Exonic hg38 LGG TCGA-VW-A8FI-01A 2 6 Out-of-frame Intra-chr q14.1 q13.3 Seq+ 92239 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICA-NCR3 MICA chr6 31403702 + NCR3 chr6 31590126 - Exonic hg38 LGG TCGA-WH-A86K-01A 2 27 3'UTR-5'UTR Intra-chr p21.33 Seq+ 92240 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC6B-TMEM184B TNRC6B chr22 40156182 + TMEM184B chr22 38248019 - Exonic hg38 LGG TCGA-WY-A859-01A 3 45 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 92241 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBXN2A-TPO UBXN2A chr2 23958355 + TPO chr2 1493802 + Exonic hg38 LGG TCGA-WY-A859-01A 3 24 CDS-3'UTR Intra-chr p23.3 Seq+ 92242 ChimerSeq TCGA FAWG TCGA_RNA-Seq HECTD4-CRY1 HECTD4 chr12 112381952 - CRY1 chr12 107022192 - Exonic hg38 LGG TCGA-WY-A859-01A 3 21 Out-of-frame Intra-chr q24.13 q23.3 Seq+ 92243 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR37-PCDH12 WDR37 chr10 1105267 + PCDH12 chr5 141958245 - Exonic hg38 LGG TCGA-WY-A859-01A 4 17 CDS-5'UTR Inter-chr p15.3 q31.3 Seq+ 92244 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAD5-COL5A1 SMAD5 chr5 136132962 + COL5A1 chr9 134699909 + Exonic hg38 LGG TCGA-WY-A859-01A 7 2 5'UTR-CDS Inter-chr q31.1 Transcription factor q34.3 Seq+ 92245 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK1E-CLCN3P1 CSNK1E chr22 38302861 - CLCN3P1 chr9 15048056 - Exonic hg38 LGG TCGA-WY-A859-01A 1 9 Out-of-frame Inter-chr q13.1 p22.3 92246 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD44-RFTN2 ANKRD44 chr2 197078703 - RFTN2 chr2 197572280 - Exonic hg38 LGG TCGA-WY-A859-01A 1 7 In-Frame Intra-chr q33.1 q33.1 92247 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD2-QKI NSD2 chr4 1958036 + QKI chr6 163455279 + Exonic hg38 LGG TCGA-WY-A859-01A 2 3 Out-of-frame Inter-chr p16.3 q26 92248 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF168-PCYT1A RNF168 chr3 196502873 - PCYT1A chr3 196257887 - Exonic hg38 LGG TCGA-WY-A859-01A 1 3 Out-of-frame Intra-chr q29 q29 92249 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCARB1-RIMBP2 SCARB1 chr12 124786357 - RIMBP2 chr12 130517917 - Exonic hg38 LGG TCGA-WY-A85A-01A 2 5 CDS-5'UTR Intra-chr q24.31 q24.33 Seq+ 92250 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALT4-CBLB B4GALT4 chr3 119236853 - CBLB chr3 105853664 - Exonic hg38 LGG TCGA-WY-A85C-01A 2 4 5'UTR-5'UTR Intra-chr q13.32 q13.11 Seq+ 92251 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC41A3-B4GALT4 SLC41A3 chr3 126067947 - B4GALT4 chr3 119237070 - Exonic hg38 LGG TCGA-WY-A85C-01A 1 1 CDS-5'UTR Intra-chr q21.3 q13.32 92252 ChimerSeq TCGA FAWG TCGA_RNA-Seq HAUS8-TEX101 HAUS8 chr19 17073274 - TEX101 chr19 43406223 + Exonic hg38 LGG TCGA-WY-A85E-01A 1 32 CDS-5'UTR Intra-chr p13.11 q13.31 92253 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS37B-PTPN11 VPS37B chr12 122895952 - PTPN11 chr12 112502144 + Exonic hg38 LGG TCGA-WY-A85E-01A 1 4 In-Frame Intra-chr q24.31 q24.13 Oncogene Tumor suppressor gene Seq+ 92254 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSK3A-CNFN GSK3A chr19 42232057 - CNFN chr19 42389039 - Exonic hg38 LIHC TCGA-2V-A95S-01A 8 25 CDS-5'UTR Intra-chr q13.2 CMGC:GSK q13.2 Seq+ 92255 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-GSTP1 PPFIA1 chr11 70272436 + GSTP1 chr11 67584685 + Exonic hg38 LIHC TCGA-2V-A95S-01A 1 5 In-Frame Intra-chr q13.3 q13.2 Tumor suppressor gene 92256 ChimerSeq TCGA FAWG TCGA_RNA-Seq XRRA1-SHANK2 XRRA1 chr11 74930300 - SHANK2 chr11 71110049 - Exonic hg38 LIHC TCGA-2Y-A9GS-01A 24 140 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 92257 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS6-PPP6R3 TMPRSS6 chr22 37103216 - PPP6R3 chr11 68609904 + Exonic hg38 LIHC TCGA-2Y-A9GT-01A 22 926 Out-of-frame Inter-chr q12.3 Tumor suppressor gene q13.2 Seq+ 92258 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPC3-GPC4 GPC3 chrX 133596440 - GPC4 chrX 133339341 - Exonic hg38 LIHC TCGA-2Y-A9GU-01A 5 23 In-Frame Intra-chr q26.2 Tumor suppressor gene q26.2 92259 ChimerSeq TCGA FAWG TCGA_RNA-Seq JADE2-UBE2B JADE2 chr5 134573762 + UBE2B chr5 134388325 + Exonic hg38 LIHC TCGA-2Y-A9GY-01A 1 7 In-Frame Intra-chr q31.1 q31.1 92260 ChimerSeq TCGA FAWG TCGA_RNA-Seq RXRA-WDR5 RXRA chr9 134326659 + WDR5 chr9 134151983 + Exonic hg38 LIHC TCGA-2Y-A9GZ-01A 74 46 Out-of-frame Intra-chr q34.2 Transcription factor q34.2 Seq+ 92261 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESRRA-KCNK4 ESRRA chr11 64307504 + KCNK4 chr11 64296878 + Exonic hg38 LIHC TCGA-2Y-A9GZ-01A 26 156 Out-of-frame Intra-chr q13.1 Transcription factor q13.1 Seq+ 92262 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMLR1-PHF12 SMLR1 chr6 130835034 + PHF12 chr17 28908881 - Exonic hg38 LIHC TCGA-2Y-A9GZ-01A 19 40 3'UTR-CDS Inter-chr q23.1 q11.2 Seq+ 92263 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF7-KALRN ZNF7 chr8 144829604 + KALRN chr3 124395135 + Exonic hg38 LIHC TCGA-2Y-A9GZ-01A 7 21 Out-of-frame Inter-chr q24.3 Transcription factor q21.1 Seq+ 92264 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOSC9-MAPK10 EXOSC9 chr4 121807622 + MAPK10 chr4 86031431 - Exonic hg38 LIHC TCGA-2Y-A9GZ-01A 2 15 Out-of-frame Intra-chr q27 q21.3 Tumor suppressor gene Seq+ 92265 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC12A7-SKIV2L2 SLC12A7 chr5 1057471 - SKIV2L2 chr5 55424720 + Exonic hg38 LIHC TCGA-2Y-A9H0-01A 115 228 Out-of-frame Intra-chr p15.33 q11.2 Seq+ 92266 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAG1-LARS2 DAG1 chr3 49510819 + LARS2 chr3 45547351 + Exonic hg38 LIHC TCGA-2Y-A9H0-01A 22 81 In-Frame Intra-chr p21.31 p21.31 Seq+ 92267 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM29-PAK1 TRIM29 chr11 120185250 - PAK1 chr11 77323360 - Exonic hg38 LIHC TCGA-2Y-A9H0-01A 13 114 5'UTR-CDS Intra-chr q23.3 q14.1 STE:STE20 Seq+ 92268 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDXDC1-ADGRG1 PDXDC1 chr16 15001856 + ADGRG1 chr16 57650253 + Exonic hg38 LIHC TCGA-2Y-A9H0-01A 7 57 5'UTR-5'UTR Intra-chr p13.11 q21 92269 ChimerSeq TCGA FAWG TCGA_RNA-Seq RXRA-KCNT2 RXRA chr9 134326659 + KCNT2 chr1 196492341 - Exonic hg38 LIHC TCGA-2Y-A9H0-01A 13 9 Out-of-frame Inter-chr q34.2 Transcription factor q31.3 Seq+ 92270 ChimerSeq TCGA FAWG TCGA_RNA-Seq RCBTB1-DOCK9 RCBTB1 chr13 49580505 - DOCK9 chr13 98807807 - Exonic hg38 LIHC TCGA-2Y-A9H0-01A 8 10 5'UTR-CDS Intra-chr q14.2 q32.3 Seq+ 92271 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGFR-LYST EGFR chr7 55019365 + LYST chr1 235833667 - Exonic hg38 LIHC TCGA-2Y-A9H0-01A 5 20 CDS-5'UTR Inter-chr p11.2 TK:EGFR Oncogene q42.3 Seq+ 92272 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARSB-DMGDH ARSB chr5 78955295 - DMGDH chr5 79026581 - Exonic hg38 LIHC TCGA-2Y-A9H0-01A 5 18 In-Frame Intra-chr q14.1 q14.1 Seq+ 92273 ChimerSeq TCGA FAWG TCGA_RNA-Seq UACA-PTPN6 UACA chr15 70695017 - PTPN6 chr12 6959927 + Exonic hg38 LIHC TCGA-2Y-A9H0-01A 5 9 Out-of-frame Inter-chr q23 p13.31 Tumor suppressor gene Seq+ 92274 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKL1-WFIKKN2 MKL1 chr22 40594674 - WFIKKN2 chr17 50839499 + Exonic hg38 LIHC TCGA-2Y-A9H0-01A 4 12 Out-of-frame Inter-chr q13.2 q21.33 Seq+ 92275 ChimerSeq TCGA FAWG TCGA_RNA-Seq SACM1L-TCTA SACM1L chr3 45689497 + TCTA chr3 49413056 + Exonic hg38 LIHC TCGA-2Y-A9H0-01A 6 4 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 92276 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDXDC1-RAB11FIP4 PDXDC1 chr16 15030056 + RAB11FIP4 chr17 31434034 + Exonic hg38 LIHC TCGA-2Y-A9H0-01A 1 22 5'UTR-CDS Inter-chr p13.11 q11.2 Seq+ 92277 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAHD1-KNSTRN BAHD1 chr15 40441268 + KNSTRN chr15 40386362 + Exonic hg38 LIHC TCGA-2Y-A9H0-01A 4 9 5'UTR-CDS Intra-chr q15.1 q15.1 Oncogene Seq+ 92278 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM7SF3-SNX31 TM7SF3 chr12 27014078 - SNX31 chr8 100600441 - Exonic hg38 LIHC TCGA-2Y-A9H0-01A 2 9 Out-of-frame Inter-chr p11.23 q22.3 Seq+ 92279 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPF4B-FAM50B PRPF4B chr6 4021466 + FAM50B chr6 3849789 + Exonic hg38 LIHC TCGA-2Y-A9H0-01A 3 2 5'UTR-5'UTR Intra-chr p25.2 p25.2 Seq+ 92280 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPKAPK3-HEMK1 MAPKAPK3 chr3 50617784 + HEMK1 chr3 50571710 + Exonic hg38 LIHC TCGA-2Y-A9H0-01A 1 8 In-Frame Intra-chr p21.2 CAMK:MAPKAPK p21.31 Seq+ 92281 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCA-PPP4R4 PRKCA chr17 66306127 + PPP4R4 chr14 94167544 + Exonic hg38 LIHC TCGA-2Y-A9H0-01A 1 7 CDS-3'UTR Inter-chr q24.2 q32.12 Seq+ 92282 ChimerSeq TCGA FAWG TCGA_RNA-Seq P4HB-AMBP P4HB chr17 81855142 - AMBP chr9 114062758 - Exonic hg38 LIHC TCGA-2Y-A9H0-01A 1 6 In-Frame Inter-chr q25.3 q32 92283 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS6-PPP6R3 TMPRSS6 chr22 37103216 - PPP6R3 chr11 68609904 + Exonic hg38 LIHC TCGA-2Y-A9H2-01A 5 116 Out-of-frame Inter-chr q12.3 Tumor suppressor gene q13.2 Seq+ 92284 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUMA1-CADM2 NUMA1 chr11 72080458 - CADM2 chr3 86065605 + Exonic hg38 LIHC TCGA-2Y-A9H2-01A 6 24 5'UTR-CDS Inter-chr q13.4 Oncogene p12.1 Tumor suppressor gene Seq+ 92285 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESYT3-FAIM ESYT3 chr3 138452089 + FAIM chr3 138629107 + Exonic hg38 LIHC TCGA-2Y-A9H2-01A 4 12 Out-of-frame Intra-chr q22.3 q22.3 92286 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMPR2-TEX41 BMPR2 chr2 202377550 + TEX41 chr2 145182204 + Exonic hg38 LIHC TCGA-2Y-A9H2-01A 1 13 3'UTR-3'UTR Intra-chr q33.1 TKL:STKR Tumor suppressor gene q22.3 92287 ChimerSeq TCGA FAWG TCGA_RNA-Seq NADSYN1-PAK1 NADSYN1 chr11 71458544 + PAK1 chr11 77392541 - Exonic hg38 LIHC TCGA-2Y-A9H2-01A 2 9 CDS-5'UTR Intra-chr q13.4 q14.1 STE:STE20 Seq+ 92288 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCNX4-GOLGA7 PCNX4 chr14 60147407 + GOLGA7 chr8 41505911 + Exonic hg38 LIHC TCGA-2Y-A9H2-01A 1 4 3'UTR-CDS Inter-chr q23.1 p11.21 92289 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD13B-IGHJ5 ANKRD13B chr17 29613745 + IGHJ5 chr14 105863854 - Exonic hg38 LIHC TCGA-2Y-A9H3-01A 8 0 Out-of-frame Inter-chr q11.2 92290 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPS1-MAP2 CPS1 chr2 210582709 + MAP2 chr2 209705580 + Exonic hg38 LIHC TCGA-2Y-A9H6-01A 5 13 In-Frame Intra-chr q34 q34 Seq+ 92291 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGRN1-C16orf96 MGRN1 chr16 4668312 + C16orf96 chr16 4571561 + Exonic hg38 LIHC TCGA-2Y-A9H6-01A 1 4 In-Frame Intra-chr p13.3 p13.3 Seq+ 92292 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLU-H19 CLU chr8 27610475 - H19 chr11 1995998 - Exonic hg38 LIHC TCGA-2Y-A9H7-01A 1 10 CDS-5'UTR Inter-chr p21.1 Tumor suppressor gene p15.5 Tumor suppressor gene 92293 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R3B-CSMD1 PPP1R3B chr8 9151347 - CSMD1 chr8 4032099 - Exonic hg38 LIHC TCGA-2Y-A9H8-01A 3 10 3'UTR-CDS Intra-chr p23.1 p23.2 Tumor suppressor gene Seq+ 92294 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESYT2-PPP1R3A ESYT2 chr7 158748194 - PPP1R3A chr7 113918297 - Exonic hg38 LIHC TCGA-2Y-A9H8-01A 1 9 Out-of-frame Intra-chr q36.3 q31.1 92295 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2CB-DLC1 PPP2CB chr8 30812320 - DLC1 chr8 13115657 - Exonic hg38 LIHC TCGA-2Y-A9H8-01A 1 4 CDS-5'UTR Intra-chr p12 Tumor suppressor gene p22 Tumor suppressor gene Seq+ 92296 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPLD1-FAM65B GPLD1 chr6 24486075 - FAM65B chr6 24875817 - Exonic hg38 LIHC TCGA-2Y-A9H9-01A 21 44 Out-of-frame Intra-chr p22.3 Seq+ 92297 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRYL-OCIAD2 FRYL chr4 48780078 - OCIAD2 chr4 48904611 - Exonic hg38 LIHC TCGA-2Y-A9H9-01A 4 15 5'UTR-5'UTR Intra-chr p11 p11 Seq+ 92298 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4A-SZT2 KDM4A chr1 43669299 + SZT2 chr1 43404380 + Exonic hg38 LIHC TCGA-2Y-A9H9-01A 1 2 Out-of-frame Intra-chr p34.2 p34.2 92299 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERPIND1-MICALL1 SERPIND1 chr22 20786148 + MICALL1 chr22 37937080 + Exonic hg38 LIHC TCGA-2Y-A9HA-01A 25 49 Out-of-frame Intra-chr q11.21 q13.1 Seq+ 92300 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAPPA2-ACBD6 PAPPA2 chr1 176771180 + ACBD6 chr1 180288517 - Exonic hg38 LIHC TCGA-2Y-A9HA-01A 15 57 Out-of-frame Intra-chr q25.2 q25.3 Seq+ 92301 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCF2-PAPPA2 NCF2 chr1 183569142 - PAPPA2 chr1 176670970 + Exonic hg38 LIHC TCGA-2Y-A9HA-01A 7 18 In-Frame Intra-chr q25.3 q25.2 Seq+ 92302 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN10-TBC1D22A ATXN10 chr22 45740538 + TBC1D22A chr22 47111508 + Exonic hg38 LIHC TCGA-2Y-A9HA-01A 1 17 In-Frame Intra-chr q13.31 q13.31 Seq+ 92303 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABL2-KCNH1 ABL2 chr1 179229241 - KCNH1 chr1 210684138 - Exonic hg38 LIHC TCGA-2Y-A9HA-01A 2 3 Out-of-frame Intra-chr q25.2 TK:Abl Oncogene 92304 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKAG2-ACTR3C PRKAG2 chr7 151675420 - ACTR3C chr7 150249054 - Exonic hg38 LIHC TCGA-2Y-A9HA-01A 1 2 In-Frame Intra-chr q36.1 q36.1 Seq+ 92305 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIVEP1-PTCRA HIVEP1 chr6 12015668 + PTCRA chr6 42923027 + Exonic hg38 LIHC TCGA-4R-AA8I-01A 9 27 In-Frame Intra-chr p24.1 Tumor suppressor gene Transcription factor p21.1 Seq+ 92306 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT9-MYH13 SEPT9 chr17 77307197 + MYH13 chr17 10360188 - Exonic hg38 LIHC TCGA-4R-AA8I-01A 4 15 Out-of-frame Intra-chr p13.1 Seq+ 92307 ChimerSeq TCGA FAWG TCGA_RNA-Seq FLVCR2-JDP2 FLVCR2 chr14 75635013 + JDP2 chr14 75469290 + Exonic hg38 LIHC TCGA-4R-AA8I-01A 2 17 Out-of-frame Intra-chr q24.3 q24.3 Tumor suppressor gene Transcription factor Seq+ 92308 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFXN5-SLC8A1 SFXN5 chr2 73020239 - SLC8A1 chr2 40177855 - Exonic hg38 LIHC TCGA-4R-AA8I-01A 3 8 Out-of-frame Intra-chr p13.2 p22.1 Seq+ 92309 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD9-CDC5L BTBD9 chr6 38256409 - CDC5L chr6 44445655 + Exonic hg38 LIHC TCGA-4R-AA8I-01A 1 7 CDS-3'UTR Intra-chr p21.2 p21.1 Transcription factor 92310 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0319L-CLSPN KIAA0319L chr1 35470863 - CLSPN chr1 35765326 - Exonic hg38 LIHC TCGA-5C-A9VG-01A 4 2 In-Frame Intra-chr p34.3 p34.3 Seq+ 92311 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUEDC2-ARL3 CUEDC2 chr10 102432526 - ARL3 chr10 102705489 - Exonic hg38 LIHC TCGA-5R-AA1C-01A 6 21 5'UTR-CDS Intra-chr q24.32 q24.32 Seq+ 92312 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR762HG-SEPT1 MIR762HG chr16 30876118 + SEPT1 chr16 30383014 - Exonic hg38 LIHC TCGA-5R-AA1C-01A 1 9 Out-of-frame Intra-chr p11.2 p11.2 92313 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJB1-PRKACA DNAJB1 chr19 14518139 - PRKACA chr19 14107409 - Exonic hg38 LIHC TCGA-5R-AA1D-01A 31 166 In-Frame Intra-chr p13.12 Tumor suppressor gene p13.12 KB Pub Seq+ 92314 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANXA4-PKN1 ANXA4 chr2 69781574 + PKN1 chr19 14467565 + Exonic hg38 LIHC TCGA-BC-4072-01B 471 2175 In-Frame Inter-chr p13.3 p13.12 AGC:PKN Seq+ 92315 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFFL-ADAM32 RFFL chr17 35063576 - ADAM32 chr8 39147130 + Exonic hg38 LIHC TCGA-BC-4072-01B 1 25 5'UTR-3'UTR Inter-chr q12 Seq+ 92316 ChimerSeq TCGA FAWG TCGA_RNA-Seq BID-ATP6V1E1 BID chr22 17738017 - ATP6V1E1 chr22 17613320 - Exonic hg38 LIHC TCGA-BC-4073-01B 31 139 In-Frame Intra-chr q11.21 q11.21 Seq+ 92317 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC2-VPS37A ZDHHC2 chr8 17156853 + VPS37A chr8 17286347 + Exonic hg38 LIHC TCGA-BC-4073-01B 15 32 Out-of-frame Intra-chr p22 Tumor suppressor gene p22 Seq+ 92318 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPZB-AKR7A3 CAPZB chr1 19485436 - AKR7A3 chr1 19286372 - Exonic hg38 LIHC TCGA-BC-4073-01B 15 17 Out-of-frame Intra-chr p36.13 p36.13 92319 ChimerSeq TCGA FAWG TCGA_RNA-Seq EMC1-UBR4 EMC1 chr1 19244906 - UBR4 chr1 19124690 - Exonic hg38 LIHC TCGA-BC-4073-01B 9 10 Out-of-frame Intra-chr p36.13 p36.13 92320 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRLR-AGXT2 PRLR chr5 35230268 - AGXT2 chr5 35014119 - Exonic hg38 LIHC TCGA-BC-4073-01B 6 20 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 92321 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB22A-VAPB RAB22A chr20 58311122 + VAPB chr20 58418211 + Exonic hg38 LIHC TCGA-BC-4073-01B 8 12 Out-of-frame Intra-chr q13.32 q13.32 92322 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMTN-LIMK2 SMTN chr22 31088113 + LIMK2 chr22 31225720 + Exonic hg38 LIHC TCGA-BC-4073-01B 1 6 Out-of-frame Intra-chr q12.2 q12.2 TKL:LISK 92323 ChimerSeq TCGA FAWG TCGA_RNA-Seq BHMT2-JMY BHMT2 chr5 79069815 + JMY chr5 79277910 + Exonic hg38 LIHC TCGA-BC-4073-01B 1 2 In-Frame Intra-chr q14.1 q14.1 92324 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRD4-AKAP8L BRD4 chr19 15332290 - AKAP8L chr19 15380612 - Exonic hg38 LIHC TCGA-BC-A10R-01A 24 30 5'UTR-CDS Intra-chr p13.12 Atypical:BRD p13.12 Transcription factor Seq+ 92325 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF3L-AK7 EIF3L chr22 37874524 + AK7 chr14 96456347 + Exonic hg38 LIHC TCGA-BC-A10R-01A 8 9 In-Frame Inter-chr q13.1 q32.2 Seq+ 92326 ChimerSeq TCGA FAWG TCGA_RNA-Seq VNN1-SLC18B1 VNN1 chr6 132711709 - SLC18B1 chr6 132770336 - Exonic hg38 LIHC TCGA-BC-A10R-01A 4 20 In-Frame Intra-chr q23.2 q23.2 Seq+ 92327 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK24-DOCK9 STK24 chr13 98576745 - DOCK9 chr13 98810291 - Exonic hg38 LIHC TCGA-BC-A10R-01A 4 11 In-Frame Intra-chr q32.2 q32.3 Seq+ 92328 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGFG2-COPS6 AGFG2 chr7 100554258 + COPS6 chr7 100091649 + Exonic hg38 LIHC TCGA-BC-A10R-01A 3 8 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 92329 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK2-PIGX PAK2 chr3 196782833 + PIGX chr3 196733759 + Exonic hg38 LIHC TCGA-BC-A10R-01A 1 16 Out-of-frame Intra-chr q29 STE:STE20 q29 Seq+ 92330 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM50B-GART TMEM50B chr21 33479838 - GART chr21 33511458 - Exonic hg38 LIHC TCGA-BC-A10R-01A 2 11 5'UTR-5'UTR Intra-chr Seq+ 92331 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP27A1-STK36 CYP27A1 chr2 218782437 + STK36 chr2 218673625 + Exonic hg38 LIHC TCGA-BC-A10R-01A 2 5 In-Frame Intra-chr q35 q35 Oncogene Seq+ 92332 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNK2-CARD19 WNK2 chr9 93290047 + CARD19 chr9 93107674 + Exonic hg38 LIHC TCGA-BC-A10R-01A 1 8 In-Frame Intra-chr q22.31 Tumor suppressor gene q22.31 92333 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERN1-TEX2 ERN1 chr17 64079662 - TEX2 chr17 64177471 - Exonic hg38 LIHC TCGA-BC-A10R-01A 1 3 In-Frame Intra-chr q23.3 q23.3 Seq+ 92334 ChimerSeq TCGA FAWG TCGA_RNA-Seq XRCC5-ABCB1 XRCC5 chr2 216132387 + ABCB1 chr7 87504449 - Exonic hg38 LIHC TCGA-BC-A10T-01A 111 763 In-Frame Inter-chr q35 Tumor suppressor gene q21.12 Seq+ 92335 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCC2-SMIM4 ABCC2 chr10 99810218 + SMIM4 chr3 52534803 + Exonic hg38 LIHC TCGA-BC-A10T-01A 75 458 CDS-5'UTR Inter-chr q24.2 p21.1 Seq+ 92336 ChimerSeq TCGA FAWG TCGA_RNA-Seq PC-ACTN4 PC chr11 66863774 - ACTN4 chr19 38700600 + Exonic hg38 LIHC TCGA-BC-A10T-01A 46 146 CDS-3'UTR Inter-chr q13.2 Seq+ 92337 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAG9-TEKT1 SPAG9 chr17 50982526 - TEKT1 chr17 6800945 - Exonic hg38 LIHC TCGA-BC-A10T-01A 28 79 Out-of-frame Intra-chr q21.33 p13.1 Seq+ 92338 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCC-DBN1 MCC chr5 113294329 - DBN1 chr5 177460703 - Exonic hg38 LIHC TCGA-BC-A10T-01A 14 46 In-Frame Intra-chr q22.2 Tumor suppressor gene q35.3 Seq+ 92339 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A14-FAM110B SLC39A14 chr8 22379514 + FAM110B chr8 58145907 + Exonic hg38 LIHC TCGA-BC-A10T-01A 12 43 5'UTR-5'UTR Intra-chr p21.3 q12.1 Seq+ 92340 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMBP-RAE1 AMBP chr9 114072925 - RAE1 chr20 57373475 + Exonic hg38 LIHC TCGA-BC-A10T-01A 11 44 Out-of-frame Inter-chr q32 q13.31 Seq+ 92341 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIX-RAD23A NFIX chr19 12995864 + RAD23A chr19 12952689 + Exonic hg38 LIHC TCGA-BC-A10T-01A 13 25 In-Frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 92342 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCB4-TMEM169 ABCB4 chr7 87446930 - TMEM169 chr2 216082072 + Exonic hg38 LIHC TCGA-BC-A10T-01A 7 38 Out-of-frame Inter-chr q21.12 q35 Seq+ 92343 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMAN2-MCC LMAN2 chr5 177334284 - MCC chr5 113448287 - Exonic hg38 LIHC TCGA-BC-A10T-01A 8 24 CDS-5'UTR Intra-chr q35.3 q22.2 Tumor suppressor gene 92344 ChimerSeq TCGA FAWG TCGA_RNA-Seq UGP2-MDH1 UGP2 chr2 63857936 + MDH1 chr2 63594488 + Exonic hg38 LIHC TCGA-BC-A10T-01A 6 6 In-Frame Intra-chr p15 p15 Seq+ 92345 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOGA1-UBTD1 HOGA1 chr10 97584914 + UBTD1 chr10 97570138 + Exonic hg38 LIHC TCGA-BC-A10T-01A 4 11 In-Frame Intra-chr q24.2 q24.1 Seq+ 92346 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGAPA2-ACSM1 RALGAPA2 chr20 20629363 - ACSM1 chr16 20685403 - Exonic hg38 LIHC TCGA-BC-A10T-01A 4 10 In-Frame Inter-chr p11.23 p12.3 Seq+ 92347 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXK2-GNG7 FOXK2 chr17 82563548 + GNG7 chr19 2520725 - Exonic hg38 LIHC TCGA-BC-A10T-01A 4 8 CDS-5'UTR Inter-chr q25.3 Transcription factor p13.3 Seq+ 92348 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRK-GTF2I CRK chr17 1455877 - GTF2I chr7 74698961 + Exonic hg38 LIHC TCGA-BC-A10T-01A 1 19 5'UTR-CDS Inter-chr p13.3 q11.23 Transcription factor Seq+ 92349 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPO5-EYS XPO5 chr6 43546571 - EYS chr6 63726680 - Exonic hg38 LIHC TCGA-BC-A10T-01A 4 7 Out-of-frame Intra-chr p21.1 Tumor suppressor gene q12 Seq+ 92350 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO17-NFE2L2 FBXO17 chr19 38975586 - NFE2L2 chr2 177338699 - Exonic hg38 LIHC TCGA-BC-A10T-01A 4 6 5'UTR-5'UTR Inter-chr q31.2 Oncogene Transcription factor 92351 ChimerSeq TCGA FAWG TCGA_RNA-Seq UQCC1-FER1L4 UQCC1 chr20 35366557 - FER1L4 chr20 35579114 - Exonic hg38 LIHC TCGA-BC-A10T-01A 2 9 CDS-3'UTR Intra-chr q11.22 q11.22 Tumor suppressor gene 92352 ChimerSeq TCGA FAWG TCGA_RNA-Seq REPS2-TXLNG REPS2 chrX 17103779 + TXLNG chrX 16818574 + Exonic hg38 LIHC TCGA-BC-A10T-01A 2 4 In-Frame Intra-chr p22.2 p22.2 Seq+ 92353 ChimerSeq TCGA FAWG TCGA_RNA-Seq P4HA1-CCDC102A P4HA1 chr10 73073731 - CCDC102A chr16 57521176 - Exonic hg38 LIHC TCGA-BC-A10T-01A 1 7 In-Frame Inter-chr q22.1 q21 Seq+ 92354 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFMBT1-HPS3 SFMBT1 chr3 52932062 - HPS3 chr3 149160046 + Exonic hg38 LIHC TCGA-BC-A10T-01A 2 2 Out-of-frame Intra-chr p21.1 q24 Seq+ 92355 ChimerSeq TCGA FAWG TCGA_RNA-Seq RLF-RTN4RL1 RLF chr1 40161636 + RTN4RL1 chr17 1937808 - Exonic hg38 LIHC TCGA-BC-A10T-01A 1 3 Out-of-frame Inter-chr p34.2 Transcription factor p13.3 Seq+ 92356 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFE2L2-FBXO27 NFE2L2 chr2 177264532 - FBXO27 chr19 39031320 - Exonic hg38 LIHC TCGA-BC-A10T-01A 1 2 Out-of-frame Inter-chr q31.2 Oncogene Transcription factor 92357 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKD1-RPS15A PKD1 chr16 2135475 - RPS15A chr16 18784823 - Exonic hg38 LIHC TCGA-BC-A10T-01A 1000 1000 Out-of-frame Intra-chr p13.3 CAMK:PKD Tumor suppressor gene p12.3 92358 ChimerSeq TCGA FAWG TCGA_RNA-Seq NMNAT3-CCDC50 NMNAT3 chr3 139627616 - CCDC50 chr3 191357088 + Exonic hg38 LIHC TCGA-BC-A10W-01A 5 9 In-Frame Intra-chr q23 q28 Seq+ 92359 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPARA-RAB2A PPARA chr22 46151970 + RAB2A chr8 60618580 + Exonic hg38 LIHC TCGA-BC-A10X-01A 19 48 5'UTR-CDS Inter-chr q13.31 Tumor suppressor gene Transcription factor q12.1 Seq+ 92360 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF4A2-KNG1 EIF4A2 chr3 186786273 + KNG1 chr3 186743705 + Exonic hg38 LIHC TCGA-BC-A10Y-01A 2222 12583 In-Frame Intra-chr q27.3 q27.3 Seq+ 92361 ChimerSeq TCGA FAWG TCGA_RNA-Seq OAZ1-YBX2 OAZ1 chr19 2269744 + YBX2 chr17 7292059 - Exonic hg38 LIHC TCGA-BC-A10Y-01A 200 1617 In-Frame Inter-chr p13.3 p13.1 Transcription factor Seq+ 92362 ChimerSeq TCGA FAWG TCGA_RNA-Seq F2-FOXH1 F2 chr11 46723518 + FOXH1 chr8 144475785 - Exonic hg38 LIHC TCGA-BC-A10Y-01A 121 849 CDS-5'UTR Inter-chr p11.2 q24.3 Transcription factor Seq+ 92363 ChimerSeq TCGA FAWG TCGA_RNA-Seq RXRA-ALG9 RXRA chr9 134326659 + ALG9 chr11 111786520 - Exonic hg38 LIHC TCGA-BC-A10Y-01A 183 233 Out-of-frame Inter-chr q34.2 Transcription factor q23.1 Seq+ 92364 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK38-TDRD7 STK38 chr6 36540072 - TDRD7 chr9 97487172 + Exonic hg38 LIHC TCGA-BC-A10Y-01A 16 113 In-Frame Inter-chr p21.31 q22.33 Seq+ 92365 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPSF1-AHNAK CPSF1 chr8 144395435 - AHNAK chr11 62433891 - Exonic hg38 LIHC TCGA-BC-A10Y-01A 14 93 5'UTR-CDS Inter-chr q24.3 q12.3 Tumor suppressor gene Seq+ 92366 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERICH5-MATN2 ERICH5 chr8 98064727 + MATN2 chr8 98030462 + Exonic hg38 LIHC TCGA-BC-A10Y-01A 15 78 In-Frame Intra-chr q22.2 q22.1 92367 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBXN6-ABHD6 UBXN6 chr19 4453930 - ABHD6 chr3 58293589 + Exonic hg38 LIHC TCGA-BC-A10Y-01A 13 72 Out-of-frame Inter-chr p13.3 p14.3 Seq+ 92368 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMKK2-ANAPC5 CAMKK2 chr12 121296638 - ANAPC5 chr12 121320459 - Exonic hg38 LIHC TCGA-BC-A10Y-01A 18 38 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 92369 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A5-NABP2 SLC39A5 chr12 56231188 + NABP2 chr12 56225448 + Exonic hg38 LIHC TCGA-BC-A10Y-01A 4 93 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 92370 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSD4-IL1RN PSD4 chr2 113157535 + IL1RN chr2 113127689 + Exonic hg38 LIHC TCGA-BC-A10Y-01A 12 28 5'UTR-5'UTR Intra-chr q14.1 q14.1 Seq+ 92371 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPNE6-CARMIL3 CPNE6 chr14 24073678 + CARMIL3 chr14 24059135 + Exonic hg38 LIHC TCGA-BC-A10Y-01A 4 56 3'UTR-3'UTR Intra-chr q11.2 q11.2 92372 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPCAT3-MAP3K13 LPCAT3 chr12 7018274 - MAP3K13 chr3 185285517 + Exonic hg38 LIHC TCGA-BC-A10Y-01A 8 38 CDS-5'UTR Inter-chr p13.31 q27.2 Seq+ 92373 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPN1-SPDYC CAPN1 chr11 65186338 + SPDYC chr11 65172246 + Exonic hg38 LIHC TCGA-BC-A10Y-01A 4 44 In-Frame Intra-chr q13.1 q13.1 Seq+ 92374 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K13-C1R MAP3K13 chr3 185291760 + C1R chr12 7086457 - Exonic hg38 LIHC TCGA-BC-A10Y-01A 5 37 5'UTR-CDS Inter-chr q27.2 p13.31 92375 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCS-ACTN3 CCS chr11 66600549 + ACTN3 chr11 66554045 + Exonic hg38 LIHC TCGA-BC-A10Y-01A 7 28 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 92376 ChimerSeq TCGA FAWG TCGA_RNA-Seq PICK1-SH3BP1 PICK1 chr22 38057850 + SH3BP1 chr22 37637615 + Exonic hg38 LIHC TCGA-BC-A10Y-01A 3 40 CDS-5'UTR Intra-chr q13.1 q13.1 92377 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1522-GLUD1P2 KIAA1522 chr1 32742189 + GLUD1P2 chr10 46772484 - Exonic hg38 LIHC TCGA-BC-A10Y-01A 6 27 CDS-3'UTR Inter-chr p35.1 q11.22 92378 ChimerSeq TCGA FAWG TCGA_RNA-Seq PFKFB1-ALAS2 PFKFB1 chrX 54993911 - ALAS2 chrX 55009343 - Exonic hg38 LIHC TCGA-BC-A10Y-01A 7 16 In-Frame Intra-chr p11.21 p11.21 Seq+ 92379 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP3A5-GJC3 CYP3A5 chr7 99676115 - GJC3 chr7 99923603 - Exonic hg38 LIHC TCGA-BC-A10Y-01A 2 25 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 92380 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRTP1-ADPRHL1 GRTP1 chr13 113363762 - ADPRHL1 chr13 113400880 - Exonic hg38 LIHC TCGA-BC-A10Y-01A 3 17 CDS-3'UTR Intra-chr q34 q34 92381 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM2-TTLL4 PUM2 chr2 20350597 - TTLL4 chr2 218727269 + Exonic hg38 LIHC TCGA-BC-A10Y-01A 2 19 5'UTR-5'UTR Intra-chr p24.1 q35 Seq+ 92382 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP3A5-AZGP1 CYP3A5 chr7 99676115 - AZGP1 chr7 99972006 - Exonic hg38 LIHC TCGA-BC-A10Y-01A 3 11 3'UTR-3'UTR Intra-chr q22.1 q22.1 Tumor suppressor gene Seq+ 92383 ChimerSeq TCGA FAWG TCGA_RNA-Seq GUSBP11-VPREB3 GUSBP11 chr22 23717031 - VPREB3 chr22 23753198 - Exonic hg38 LIHC TCGA-BC-A10Y-01A 2 8 3'UTR-CDS Intra-chr q11.23 q11.23 Seq+ 92384 ChimerSeq TCGA FAWG TCGA_RNA-Seq TWF2-WDR82 TWF2 chr3 52235029 - WDR82 chr3 52284591 - Exonic hg38 LIHC TCGA-BC-A10Y-01A 1 5 CDS-5'UTR Intra-chr p21.2 p21.2 Seq+ 92385 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC16A1-PTGR2 SLC16A1 chr1 112956035 - PTGR2 chr14 73858816 + Exonic hg38 LIHC TCGA-BC-A10Y-01A 1 1 5'UTR-5'UTR Inter-chr q24.3 92386 ChimerSeq TCGA FAWG TCGA_RNA-Seq HGD-RABL3 HGD chr3 120652592 - RABL3 chr3 120694224 - Exonic hg38 LIHC TCGA-BC-A10Z-01A 110 277 In-Frame Intra-chr q13.33 q13.33 Seq+ 92387 ChimerSeq TCGA FAWG TCGA_RNA-Seq COMMD9-CYP19A1 COMMD9 chr11 36289362 - CYP19A1 chr15 51242950 - Exonic hg38 LIHC TCGA-BC-A10Z-01A 9 10 5'UTR-5'UTR Inter-chr p13 q21.2 Seq+ 92388 ChimerSeq TCGA FAWG TCGA_RNA-Seq COMMD9-CDKL2 COMMD9 chr11 36289362 - CDKL2 chr4 75581898 - Exonic hg38 LIHC TCGA-BC-A10Z-01A 5 6 In-Frame Inter-chr p13 q21.1 CMGC:CDKL Seq+ 92389 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFMBT1-PBRM1 SFMBT1 chr3 53045816 - PBRM1 chr3 52589255 - Exonic hg38 LIHC TCGA-BC-A10Z-01A 1 17 5'UTR-CDS Intra-chr p21.1 p21.1 Oncogene Tumor suppressor gene 92390 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUZ12-STAP2 SUZ12 chr17 31983104 + STAP2 chr19 4325545 - Exonic hg38 LIHC TCGA-BC-A10Z-01A 1 15 Out-of-frame Inter-chr q11.2 Tumor suppressor gene p13.3 92391 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL52-TSKS MRPL52 chr14 22833482 + TSKS chr19 49762232 - Exonic hg38 LIHC TCGA-BC-A10Z-01A 1 9 Out-of-frame Inter-chr q11.2 q13.33 92392 ChimerSeq TCGA FAWG TCGA_RNA-Seq C3-SHANK3 C3 chr19 6717981 - SHANK3 chr22 50705065 + Exonic hg38 LIHC TCGA-BC-A112-01A 51 422 Out-of-frame Inter-chr p13.3 Seq+ 92393 ChimerSeq TCGA FAWG TCGA_RNA-Seq UIMC1-MXD3 UIMC1 chr5 176970742 - MXD3 chr5 177307964 - Exonic hg38 LIHC TCGA-BC-A112-01A 23 39 In-Frame Intra-chr q35.2 Tumor suppressor gene q35.3 Transcription factor Seq+ 92394 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMB2-DENND6B PSMB2 chr1 35631274 - DENND6B chr22 50312417 - Exonic hg38 LIHC TCGA-BC-A112-01A 17 61 In-Frame Inter-chr p34.3 q13.33 Seq+ 92395 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF20B-LIPJ KIF20B chr10 89745959 + LIPJ chr10 88602576 + Exonic hg38 LIHC TCGA-BC-A112-01A 10 6 Out-of-frame Intra-chr q23.31 q23.31 Seq+ 92396 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCCA-ZIC2 PCCA chr13 100209463 + ZIC2 chr13 99984946 + Exonic hg38 LIHC TCGA-BC-A112-01A 2 3 Out-of-frame Intra-chr q32.3 q32.3 Transcription factor Seq+ 92397 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT1-PSMB2 CNOT1 chr16 58629728 - PSMB2 chr1 35636432 - Exonic hg38 LIHC TCGA-BC-A112-01A 1 6 5'UTR-CDS Inter-chr q21 p34.3 92398 ChimerSeq TCGA FAWG TCGA_RNA-Seq RABL6-FAM69B RABL6 chr9 136823659 + FAM69B chr9 136717577 + Exonic hg38 LIHC TCGA-BC-A112-01A 1 3 Out-of-frame Intra-chr q34.3 q34.3 92399 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPAS1-TMEM247 EPAS1 chr2 46378767 + TMEM247 chr2 46480405 + Exonic hg38 LIHC TCGA-BC-A216-01A 16 84 Out-of-frame Intra-chr p21 Tumor suppressor gene Transcription factor p21 92400 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS6-MPST TMPRSS6 chr22 37095551 - MPST chr22 37024192 + Exonic hg38 LIHC TCGA-BC-A216-01A 3 22 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q12.3 Seq+ 92401 ChimerSeq TCGA FAWG TCGA_RNA-Seq SORBS2-FAM53B SORBS2 chr4 185811664 - FAM53B chr10 124696212 - Exonic hg38 LIHC TCGA-BC-A216-01A 5 12 5'UTR-CDS Inter-chr q35.1 q26.13 Seq+ 92402 ChimerSeq TCGA FAWG TCGA_RNA-Seq COG4-MTSS1L COG4 chr16 70480729 - MTSS1L chr16 70664176 - Exonic hg38 LIHC TCGA-BC-A216-01A 4 14 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 92403 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLIP1-RSRC2 CLIP1 chr12 122399781 - RSRC2 chr12 122515227 - Exonic hg38 LIHC TCGA-BC-A216-01A 1 20 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 92404 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR59-PTGES3L WDR59 chr16 74984964 - PTGES3L chr17 42971696 - Exonic hg38 LIHC TCGA-BC-A216-01A 3 11 In-Frame Inter-chr q23.1 q21.31 Seq+ 92405 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA5-RASGEF1C PLEKHA5 chr12 19132450 + RASGEF1C chr5 180138058 - Exonic hg38 LIHC TCGA-BC-A216-01A 1 12 CDS-5'UTR Inter-chr p12.3 q35.3 Seq+ 92406 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC8-GAREM1 TRAPPC8 chr18 31870372 - GAREM1 chr18 32136460 - Exonic hg38 LIHC TCGA-BC-A216-01A 1 12 CDS-3'UTR Intra-chr q12.1 q12.1 92407 ChimerSeq TCGA FAWG TCGA_RNA-Seq HAUS6-PLIN2 HAUS6 chr9 19094317 - PLIN2 chr9 19131271 - Exonic hg38 LIHC TCGA-BC-A216-01A 2 7 CDS-5'UTR Intra-chr p22.1 p22.1 Seq+ 92408 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBAC2-CLYBL UBAC2 chr13 99318069 + CLYBL chr13 99772824 + Exonic hg38 LIHC TCGA-BC-A216-01A 2 5 Out-of-frame Intra-chr q32.3 q32.3 Seq+ 92409 ChimerSeq TCGA FAWG TCGA_RNA-Seq WARS2-HMGCS2 WARS2 chr1 119042264 - HMGCS2 chr1 119764626 - Exonic hg38 LIHC TCGA-BC-A216-01A 1 9 In-Frame Intra-chr p12 p12 92410 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATOH8-LYG2 ATOH8 chr2 85764182 + LYG2 chr2 99246820 - Exonic hg38 LIHC TCGA-BC-A216-01A 2 2 Out-of-frame Intra-chr p11.2 Transcription factor q11.2 Seq+ 92411 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM2-PDE4A DNM2 chr19 10759811 + PDE4A chr19 10416884 + Exonic hg38 LIHC TCGA-BC-A216-01A 1 4 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 92412 ChimerSeq TCGA FAWG TCGA_RNA-Seq UGT2B4-MTHFD2L UGT2B4 chr4 69489439 - MTHFD2L chr4 74160055 + Exonic hg38 LIHC TCGA-BC-A217-01A 32 580 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 92413 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR37-AHNAK WDR37 chr10 1084538 + AHNAK chr11 62491831 - Exonic hg38 LIHC TCGA-BC-A217-01A 28 119 Out-of-frame Inter-chr p15.3 q12.3 Tumor suppressor gene Seq+ 92414 ChimerSeq TCGA FAWG TCGA_RNA-Seq CARD10-LGALS2 CARD10 chr22 37515973 - LGALS2 chr22 37571931 - Exonic hg38 LIHC TCGA-BC-A217-01A 33 96 In-Frame Intra-chr q13.1 q13.1 Seq+ 92415 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVR-IGSF23 PVR chr19 44654017 + IGSF23 chr19 44623707 + Exonic hg38 LIHC TCGA-BC-A217-01A 14 62 In-Frame Intra-chr q13.31 q13.31 Seq+ 92416 ChimerSeq TCGA FAWG TCGA_RNA-Seq OAF-APOA5 OAF chr11 120211510 + APOA5 chr11 116791892 - Exonic hg38 LIHC TCGA-BC-A217-01A 5 84 CDS-5'UTR Intra-chr q23.3 q23.3 Seq+ 92417 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATN1-ENO2 ATN1 chr12 6928384 + ENO2 chr12 6915821 + Exonic hg38 LIHC TCGA-BC-A217-01A 10 25 5'UTR-5'UTR Intra-chr p13.31 p13.31 Seq+ 92418 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERPINA11-SERPINA12 SERPINA11 chr14 94452729 - SERPINA12 chr14 94498430 - Exonic hg38 LIHC TCGA-BC-A217-01A 8 29 5'UTR-5'UTR Intra-chr q32.13 q32.13 92419 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP13-MYL5 AKAP13 chr15 85380798 + MYL5 chr4 681893 + Exonic hg38 LIHC TCGA-BC-A217-01A 3 38 5'UTR-CDS Inter-chr q25.3 p16.3 Seq+ 92420 ChimerSeq TCGA FAWG TCGA_RNA-Seq OAF-ZPR1 OAF chr11 120211510 + ZPR1 chr11 116787643 - Exonic hg38 LIHC TCGA-BC-A217-01A 7 15 In-Frame Intra-chr q23.3 q23.3 92421 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAPPA2-ASTN1 PAPPA2 chr1 176671115 + ASTN1 chr1 176894830 - Exonic hg38 LIHC TCGA-BC-A217-01A 2 18 In-Frame Intra-chr q25.2 q25.2 Seq+ 92422 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM83G-ERCC6 FAM83G chr17 18988247 - ERCC6 chr10 49461556 - Exonic hg38 LIHC TCGA-BC-A217-01A 4 2 Out-of-frame Inter-chr p11.2 q11.23 Seq+ 92423 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM29-TRIM65 TRIM29 chr11 120185210 - TRIM65 chr17 75880629 - Exonic hg38 LIHC TCGA-BC-A217-01A 1 10 Out-of-frame Inter-chr q23.3 q25.1 92424 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSEN1-ACSM1 PSEN1 chr14 73136583 + ACSM1 chr16 20697788 - Exonic hg38 LIHC TCGA-BC-A217-01A 1 8 5'UTR-5'UTR Inter-chr q24.2 p12.3 Seq+ 92425 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFR2-NCOR2 TFR2 chr7 100626763 - NCOR2 chr12 124363799 - Exonic hg38 LIHC TCGA-BC-A3KF-01A 6 13 Out-of-frame Inter-chr q22.1 q24.31 Seq+ 92426 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOR1-ZNF595 NCOR1 chr17 16215362 - ZNF595 chr4 59430 + Exonic hg38 LIHC TCGA-BC-A3KF-01A 2 4 5'UTR-5'UTR Inter-chr p11.2 Oncogene p16.3 Transcription factor Seq+ 92427 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPAM-TMIGD3 GPAM chr10 112215168 - TMIGD3 chr1 111490762 - Exonic hg38 LIHC TCGA-BC-A3KG-01A 6 178 5'UTR-CDS Inter-chr q25.2 p13.2 92428 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPAM-ADORA3 GPAM chr10 112215168 - ADORA3 chr1 111500556 - Exonic hg38 LIHC TCGA-BC-A3KG-01A 16 45 5'UTR-5'UTR Inter-chr q25.2 p13.2 92429 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF410-ANKS3 ZNF410 chr14 73898262 + ANKS3 chr16 4698062 - Exonic hg38 LIHC TCGA-BC-A3KG-01A 9 42 Out-of-frame Inter-chr q24.3 Transcription factor p13.3 Seq+ 92430 ChimerSeq TCGA FAWG TCGA_RNA-Seq CIDEB-PTEN CIDEB chr14 24306374 - PTEN chr10 87952118 + Exonic hg38 LIHC TCGA-BC-A3KG-01A 3 52 5'UTR-3'UTR Inter-chr q12 q23.31 Oncogene Tumor suppressor gene Seq+ 92431 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D22B-FGD2 TBC1D22B chr6 37291357 + FGD2 chr6 37014646 + Exonic hg38 LIHC TCGA-BC-A3KG-01A 7 26 In-Frame Intra-chr p21.2 p21.2 Seq+ 92432 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM160A1-CCNA2 FAM160A1 chr4 151482648 + CCNA2 chr4 121821091 - Exonic hg38 LIHC TCGA-BC-A3KG-01A 4 37 5'UTR-CDS Intra-chr q31.3 q27 Seq+ 92433 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6R2-CBX1 PPP6R2 chr22 50406875 + CBX1 chr17 48075100 - Exonic hg38 LIHC TCGA-BC-A3KG-01A 6 26 In-Frame Inter-chr q13.33 q21.32 Seq+ 92434 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSH1-SVOP SSH1 chr12 108852638 - SVOP chr12 108961047 - Exonic hg38 LIHC TCGA-BC-A3KG-01A 2 30 Out-of-frame Intra-chr q24.11 q24.11 Seq+ 92435 ChimerSeq TCGA FAWG TCGA_RNA-Seq ICAM1-PRR14L ICAM1 chr19 10275028 + PRR14L chr22 31684389 - Exonic hg38 LIHC TCGA-BC-A3KG-01A 4 8 CDS-3'UTR Inter-chr p13.2 q12.2 Seq+ 92436 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP4Z1-ALYREF CYP4Z1 chr1 47068763 + ALYREF chr17 81890820 - Exonic hg38 LIHC TCGA-BC-A3KG-01A 1 5 Out-of-frame Inter-chr p33 q25.3 92437 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRP8-PPFIBP2 RRP8 chr11 6603404 - PPFIBP2 chr11 7639732 + Exonic hg38 LIHC TCGA-BC-A3KG-01A 1 4 In-Frame Intra-chr p15.4 p15.4 92438 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMHD1-RBL1 SAMHD1 chr20 36946738 - RBL1 chr20 37007559 - Exonic hg38 LIHC TCGA-BC-A3KG-01A 1 3 Out-of-frame Intra-chr q11.23 q11.23 Tumor suppressor gene 92439 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPLOC4-CYP4B1 NPLOC4 chr17 81613318 - CYP4B1 chr1 46764978 + Exonic hg38 LIHC TCGA-BC-A3KG-01A 1 1 CDS-5'UTR Inter-chr q25.3 p33 92440 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBNO2-PLPPR3 SBNO2 chr19 1116021 - PLPPR3 chr19 821585 - Exonic hg38 LIHC TCGA-BC-A5W4-01A 3 10 5'UTR-5'UTR Intra-chr p13.3 92441 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRPAP1-TMEM175 LRPAP1 chr4 3509185 - TMEM175 chr4 947709 + Exonic hg38 LIHC TCGA-BC-A5W4-01A 3 4 3'UTR-5'UTR Intra-chr p16.3 p16.3 Seq+ 92442 ChimerSeq TCGA FAWG TCGA_RNA-Seq UHRF2-OLFM1 UHRF2 chr9 6421142 + OLFM1 chr9 135095864 + Exonic hg38 LIHC TCGA-BC-A5W4-01A 1 7 In-Frame Intra-chr p24.1 Tumor suppressor gene q34.3 Seq+ 92443 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4-GTF2H5 MAP4 chr3 48088773 - GTF2H5 chr6 158191977 + Exonic hg38 LIHC TCGA-BC-A69H-01A 10 78 5'UTR-CDS Inter-chr p21.31 q25.3 Seq+ 92444 ChimerSeq TCGA FAWG TCGA_RNA-Seq WHRN-AMBP WHRN chr9 114466267 - AMBP chr9 114076740 - Exonic hg38 LIHC TCGA-BC-A8YO-01A 90 272 In-Frame Intra-chr q32 q32 92445 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOSR1-CPD GOSR1 chr17 30484770 + CPD chr17 30461877 + Exonic hg38 LIHC TCGA-BC-A8YO-01A 19 130 In-Frame Intra-chr q11.2 q11.2 Tumor suppressor gene Seq+ 92446 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP42-KMO ARHGAP42 chr11 100859625 + KMO chr1 241586679 + Exonic hg38 LIHC TCGA-BC-A8YO-01A 20 69 In-Frame Inter-chr q22.1 q43 Seq+ 92447 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNK1-B4GALNT3 WNK1 chr12 830160 + B4GALNT3 chr12 548231 + Exonic hg38 LIHC TCGA-BC-A8YO-01A 23 49 In-Frame Intra-chr p13.33 p13.33 KB Pub Seq+ 92448 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A44-AKAP2 SLC25A44 chr1 156194247 + AKAP2 chr9 110156319 + Exonic hg38 LIHC TCGA-BC-A8YO-01A 4 74 Out-of-frame Inter-chr q22 q31.3 Seq+ 92449 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM25-DCAF4 RBM25 chr14 73106038 + DCAF4 chr14 72958474 + Exonic hg38 LIHC TCGA-BC-A8YO-01A 12 21 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 92450 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOP2-PIANP NOP2 chr12 6567816 - PIANP chr12 6698104 - Exonic hg38 LIHC TCGA-BC-A8YO-01A 4 48 CDS-5'UTR Intra-chr p13.31 p13.31 Seq+ 92451 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFE2L2-NEMP2 NFE2L2 chr2 177264532 - NEMP2 chr2 190525378 - Exonic hg38 LIHC TCGA-BC-A8YO-01A 8 28 Out-of-frame Intra-chr q31.2 Oncogene Transcription factor q32.2 92452 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALT5-RNF151 B4GALT5 chr20 49698198 - RNF151 chr16 1967274 + Exonic hg38 LIHC TCGA-BC-A8YO-01A 8 18 Out-of-frame Inter-chr q13.13 p13.3 Seq+ 92453 ChimerSeq TCGA FAWG TCGA_RNA-Seq XRCC5-TMEM169 XRCC5 chr2 216148276 + TMEM169 chr2 216095838 + Exonic hg38 LIHC TCGA-BC-A8YO-01A 8 16 CDS-5'UTR Intra-chr q35 Tumor suppressor gene q35 Seq+ 92454 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13L-HRK MED13L chr12 116277060 - HRK chr12 116861466 - Exonic hg38 LIHC TCGA-BC-A8YO-01A 4 24 CDS-3'UTR Intra-chr q24.21 q24.22 Seq+ 92455 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEN1-CDC42BPG MEN1 chr11 64805034 - CDC42BPG chr11 64840648 - Exonic hg38 LIHC TCGA-BC-A8YO-01A 1 14 In-Frame Intra-chr q13.1 Oncogene Tumor suppressor gene q13.1 Seq+ 92456 ChimerSeq TCGA FAWG TCGA_RNA-Seq MFSD14B-PTPDC1 MFSD14B chr9 94446936 + PTPDC1 chr9 94095317 + Exonic hg38 LIHC TCGA-BC-A8YO-01A 1 7 Out-of-frame Intra-chr q22.32 q22.32 92457 ChimerSeq TCGA FAWG TCGA_RNA-Seq OIP5-GPR176 OIP5 chr15 41313273 - GPR176 chr15 39807258 - Exonic hg38 LIHC TCGA-BC-A8YO-01A 2 3 Out-of-frame Intra-chr q15.1 q15.1 Seq+ 92458 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC22A3-CYP20A1 SLC22A3 chr6 160443742 + CYP20A1 chr2 203245846 + Exonic hg38 LIHC TCGA-BC-A8YO-01A 1 6 Out-of-frame Inter-chr q25.3 q33.2 Seq+ 92459 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALT5-TBL3 B4GALT5 chr20 49713576 - TBL3 chr16 1974056 + Exonic hg38 LIHC TCGA-BC-A8YO-01A 1 5 Out-of-frame Inter-chr q13.13 p13.3 Seq+ 92460 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARD3B-CRELD2 PARD3B chr2 204686282 + CRELD2 chr22 49919230 + Exonic hg38 LIHC TCGA-BC-A8YO-01A 1 2 In-Frame Inter-chr q33.3 q13.33 92461 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP2C18-HELLS CYP2C18 chr10 94733438 + HELLS chr10 94571388 + Exonic hg38 LIHC TCGA-BC-A8YO-01A 1 1 Out-of-frame Intra-chr q23.33 q23.33 Seq+ 92462 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSD17B11-UGT2A3 HSD17B11 chr4 87390861 - UGT2A3 chr4 68932759 - Exonic hg38 LIHC TCGA-BD-A2L6-01A 28 191 CDS-5'UTR Intra-chr q22.1 Seq+ 92463 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLLT10-MINPP1 MLLT10 chr10 21534804 + MINPP1 chr10 87552082 + Exonic hg38 LIHC TCGA-BD-A2L6-01A 4 29 In-Frame Intra-chr p12.31 Oncogene q23.2 Seq+ 92464 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGRN1-C16orf96 MGRN1 chr16 4625048 + C16orf96 chr16 4571561 + Exonic hg38 LIHC TCGA-BD-A2L6-01A 1 7 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 92465 ChimerSeq TCGA FAWG TCGA_RNA-Seq MATN2-LAPTM4B MATN2 chr8 98007601 + LAPTM4B chr8 97851397 + Exonic hg38 LIHC TCGA-BD-A3ER-01A 7 34 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 92466 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID4A-NAA30 ARID4A chr14 58299860 + NAA30 chr14 57396752 + Exonic hg38 LIHC TCGA-BD-A3ER-01A 10 17 In-Frame Intra-chr q23.1 q22.3 Seq+ 92467 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGG-HP FGG chr4 154606705 - HP chr16 72060232 + Exonic hg38 LIHC TCGA-BD-A3ER-01A 1 17 In-Frame Inter-chr q32.1 q22.2 Tumor suppressor gene 92468 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIPC-TCF12 LIPC chr15 58432120 + TCF12 chr15 57166402 + Exonic hg38 LIHC TCGA-BD-A3ER-01A 1 4 In-Frame Intra-chr q21.3 q21.3 Oncogene Transcription factor Seq+ 92469 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0319L-CIB2 KIAA0319L chr1 35557207 - CIB2 chr15 78111276 - Exonic hg38 LIHC TCGA-BW-A5NO-01A 13 64 5'UTR-5'UTR Inter-chr p34.3 q25.1 Seq+ 92470 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN23-CCDC14 PTPN23 chr3 47396217 + CCDC14 chr3 123897613 - Exonic hg38 LIHC TCGA-BW-A5NO-01A 6 36 CDS-3'UTR Intra-chr p21.31 Tumor suppressor gene q21.1 Seq+ 92471 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGCS2-NBPF7 HMGCS2 chr1 119755427 - NBPF7 chr1 119836208 - Exonic hg38 LIHC TCGA-BW-A5NO-01A 4 17 In-Frame Intra-chr p12 p12 Seq+ 92472 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYLK-TM7SF2 MYLK chr3 123799833 - TM7SF2 chr11 65113220 + Exonic hg38 LIHC TCGA-BW-A5NO-01A 3 21 5'UTR-5'UTR Inter-chr q21.1 q13.1 92473 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF148-LYPLA2 ZNF148 chr3 125375102 - LYPLA2 chr1 23792657 + Exonic hg38 LIHC TCGA-BW-A5NO-01A 5 1 5'UTR-5'UTR Inter-chr q21.2 Transcription factor p36.11 Seq+ 92474 ChimerSeq TCGA FAWG TCGA_RNA-Seq EP400-SDHC EP400 chr12 131950036 + SDHC chr1 161323614 + Exonic hg38 LIHC TCGA-BW-A5NO-01A 3 7 5'UTR-5'UTR Inter-chr q24.33 Oncogene q23.3 Oncogene Seq+ 92475 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPHL1P-TM4SF1 CPHL1P chr3 149249022 - TM4SF1 chr3 149371867 - Exonic hg38 LIHC TCGA-BW-A5NO-01A 3 2 Out-of-frame Intra-chr q25.1 q25.1 92476 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM223-SLC22A8 TMEM223 chr11 62791679 - SLC22A8 chr11 62993878 - Exonic hg38 LIHC TCGA-BW-A5NO-01A 1 4 In-Frame Intra-chr q12.3 q12.3 Seq+ 92477 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBP4-GPC3 RBP4 chr10 93600393 - GPC3 chrX 133536293 - Exonic hg38 LIHC TCGA-BW-A5NO-01A 1 3 In-Frame Inter-chr q23.33 q26.2 Tumor suppressor gene 92478 ChimerSeq TCGA FAWG TCGA_RNA-Seq IRF2-ENPP6 IRF2 chr4 184474379 - ENPP6 chr4 184112809 - Exonic hg38 LIHC TCGA-BW-A5NP-01A 7 156 5'UTR-CDS Intra-chr q35.1 Transcription factor q35.1 Seq+ 92479 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF252P-TSHZ2 ZNF252P chr8 144994479 - TSHZ2 chr20 53487144 + Exonic hg38 LIHC TCGA-BW-A5NP-01A 6 32 3'UTR-3'UTR Inter-chr q24.3 q13.2 Transcription factor Seq+ 92480 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOR3A-LYPD8 TOR3A chr1 179082387 + LYPD8 chr1 248751130 - Exonic hg38 LIHC TCGA-BW-A5NP-01A 1 14 CDS-5'UTR Intra-chr q25.2 q44 92481 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMSAP2-DHRS3 CAMSAP2 chr1 200761098 + DHRS3 chr1 12580666 - Exonic hg38 LIHC TCGA-CC-5258-01A 13 45 In-Frame Intra-chr q32.1 p36.21 Seq+ 92482 ChimerSeq TCGA FAWG TCGA_RNA-Seq NBEAL1-CYP20A1 NBEAL1 chr2 203110282 + CYP20A1 chr2 203266514 + Exonic hg38 LIHC TCGA-CC-5258-01A 4 15 In-Frame Intra-chr q33.2 q33.2 92483 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRFIP2-SETD2 LRRFIP2 chr3 37174539 - SETD2 chr3 47046621 - Exonic hg38 LIHC TCGA-CC-5258-01A 3 9 5'UTR-CDS Intra-chr p22.2 p21.31 Oncogene Tumor suppressor gene Seq+ 92484 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K13-CLPTM1L MAP3K13 chr3 185473761 + CLPTM1L chr5 1341860 - Exonic hg38 LIHC TCGA-CC-5258-01A 2 7 CDS-3'UTR Inter-chr q27.2 p15.33 Seq+ 92485 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM37-MSI2 TRIM37 chr17 59070823 - MSI2 chr17 57401379 + Exonic hg38 LIHC TCGA-CC-5258-01A 2 5 Out-of-frame Intra-chr q22 q22 Seq+ 92486 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1191-CLTB KIAA1191 chr5 176361602 - CLTB chr5 176392945 - Exonic hg38 LIHC TCGA-CC-5259-01A 1 7 5'UTR-CDS Intra-chr q35.2 q35.2 92487 ChimerSeq TCGA FAWG TCGA_RNA-Seq URI1-RYR1 URI1 chr19 29942664 + RYR1 chr19 38548233 + Exonic hg38 LIHC TCGA-CC-5260-01A 16 64 Out-of-frame Intra-chr q12 q13.2 92488 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAI1-MAN1A2 RAI1 chr17 17681793 + MAN1A2 chr1 117402186 + Exonic hg38 LIHC TCGA-CC-5260-01A 4 5 5'UTR-CDS Inter-chr p11.2 p12 Seq+ 92489 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R5E-C14orf39 PPP2R5E chr14 63539529 - C14orf39 chr14 60468536 - Exonic hg38 LIHC TCGA-CC-5261-01A 1 14 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 92490 ChimerSeq TCGA FAWG TCGA_RNA-Seq OCLN-ADGRV1 OCLN chr5 69492659 + ADGRV1 chr5 90965415 + Exonic hg38 LIHC TCGA-CC-5263-01A 15 776 5'UTR-5'UTR Intra-chr q13.2 q14.3 92491 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMCO6-CYSTM1 TMCO6 chr5 140641780 + CYSTM1 chr5 140243305 + Exonic hg38 LIHC TCGA-CC-5263-01A 52 174 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 92492 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM222B-FLOT2 FAM222B chr17 28834293 - FLOT2 chr17 28884315 - Exonic hg38 LIHC TCGA-CC-5263-01A 12 286 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 92493 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNN3-ALG14 CNN3 chr1 94926838 - ALG14 chr1 94983306 - Exonic hg38 LIHC TCGA-CC-5263-01A 37 169 In-Frame Intra-chr p21.3 p21.3 Seq+ 92494 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLMN-VTI1B CLMN chr14 95319711 - VTI1B chr14 67653498 - Exonic hg38 LIHC TCGA-CC-5263-01A 41 69 Out-of-frame Intra-chr q32.13 q24.1 Seq+ 92495 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOG-RHOD RHOG chr11 3840894 - RHOD chr11 67071435 + Exonic hg38 LIHC TCGA-CC-5263-01A 37 16 5'UTR-CDS Intra-chr p15.4 q13.2 92496 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIN-TPM1 NIN chr14 50830464 - TPM1 chr15 63056985 + Exonic hg38 LIHC TCGA-CC-5263-01A 30 32 5'UTR-CDS Inter-chr q22.1 Oncogene q22.2 Seq+ 92497 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1109-CCNA2 KIAA1109 chr4 122154112 + CCNA2 chr4 121821091 - Exonic hg38 LIHC TCGA-CC-5263-01A 11 62 5'UTR-CDS Intra-chr q27 q27 Seq+ 92498 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAST4-PLIN2 MAST4 chr5 66597018 + PLIN2 chr9 19131271 - Exonic hg38 LIHC TCGA-CC-5263-01A 15 40 CDS-5'UTR Inter-chr q12.3 AGC:MAST p22.1 Seq+ 92499 ChimerSeq TCGA FAWG TCGA_RNA-Seq NECAB3-PXMP4 NECAB3 chr20 33669375 - PXMP4 chr20 33714736 - Exonic hg38 LIHC TCGA-CC-5263-01A 13 32 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 92500 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABL1-PRDM12 ABL1 chr9 130714455 + PRDM12 chr9 130678529 + Exonic hg38 LIHC TCGA-CC-5263-01A 10 32 Out-of-frame Intra-chr q34.12 TK:Abl Oncogene q34.12 Transcription factor Seq+ 92501 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRCA1-BECN1 BRCA1 chr17 43057052 - BECN1 chr17 42816054 - Exonic hg38 LIHC TCGA-CC-5263-01A 5 11 Out-of-frame Intra-chr q21.31 Oncogene Tumor suppressor gene q21.31 Tumor suppressor gene Seq+ 92502 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF341-C20orf144 ZNF341 chr20 33732052 + C20orf144 chr20 33663532 + Exonic hg38 LIHC TCGA-CC-5263-01A 4 7 Out-of-frame Intra-chr q11.22 Transcription factor q11.22 Seq+ 92503 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHTN1-PDZD8 SHTN1 chr10 116979256 - PDZD8 chr10 117290348 - Exonic hg38 LIHC TCGA-CC-5263-01A 2 10 In-Frame Intra-chr q25.3 q26.11 92504 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEPSIN-SLC38A10 TEPSIN chr17 81233432 - SLC38A10 chr17 81272627 - Exonic hg38 LIHC TCGA-CC-5263-01A 2 10 Out-of-frame Intra-chr q25.3 q25.3 92505 ChimerSeq TCGA FAWG TCGA_RNA-Seq PMVK-FNBP1 PMVK chr1 154936591 - FNBP1 chr9 129929695 - Exonic hg38 LIHC TCGA-CC-5263-01A 1 4 Out-of-frame Inter-chr q21.3 q34.11 92506 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRG6-GJE1 ADGRG6 chr6 142302331 + GJE1 chr6 142133850 + Exonic hg38 LIHC TCGA-CC-5263-01A 1 1 Out-of-frame Intra-chr q24.2 q24.1 92507 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTMR12-SPEF2 MTMR12 chr5 32268701 - SPEF2 chr5 35628460 + Exonic hg38 LIHC TCGA-CC-5264-01A 12 29 In-Frame Intra-chr p13.3 p13.2 Seq+ 92508 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT5B-CPSF7 KMT5B chr11 68180132 - CPSF7 chr11 61404704 - Exonic hg38 LIHC TCGA-CC-5264-01A 3 28 3'UTR-3'UTR Intra-chr q13.2 q12.2 92509 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIO-ZNF131 TRIO chr5 14143882 + ZNF131 chr5 43161249 + Exonic hg38 LIHC TCGA-CC-5264-01A 3 7 Out-of-frame Intra-chr p15.2 p12 Transcription factor Seq+ 92510 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPEF2-SLC6A18 SPEF2 chr5 35649425 + SLC6A18 chr5 1242707 + Exonic hg38 LIHC TCGA-CC-5264-01A 1 5 In-Frame Intra-chr p13.2 p15.33 Seq+ 92511 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT5B-OR5M10 KMT5B chr11 68180132 - OR5M10 chr11 56577675 - Exonic hg38 LIHC TCGA-CC-5264-01A 1000 1000 Out-of-frame Intra-chr q13.2 q12.1 92512 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT5B-OR5M1 KMT5B chr11 68179535 - OR5M1 chr11 56613502 - Exonic hg38 LIHC TCGA-CC-5264-01A 1000 1000 5'UTR-5'UTR Intra-chr q13.2 q12.1 92513 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC30A10-MEX3A SLC30A10 chr1 219927028 - MEX3A chr1 156077682 - Exonic hg38 LIHC TCGA-CC-A1HT-01A 3 2 In-Frame Intra-chr q41 q22 Seq+ 92514 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAU1-PREX1 STAU1 chr20 49115782 - PREX1 chr20 48630794 - Exonic hg38 LIHC TCGA-CC-A1HT-01A 1 4 In-Frame Intra-chr q13.13 q13.13 92515 ChimerSeq TCGA FAWG TCGA_RNA-Seq RREB1-F13A1 RREB1 chr6 7108060 + F13A1 chr6 6318682 - Exonic hg38 LIHC TCGA-CC-A3M9-01A 3 16 5'UTR-5'UTR Intra-chr p24.3 Transcription factor p25.1 Seq+ 92516 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRXN3-ADCK1 NRXN3 chr14 78243802 + ADCK1 chr14 77931518 + Exonic hg38 LIHC TCGA-CC-A3M9-01A 3 12 Out-of-frame Intra-chr q24.3 q24.3 Atypical:ABC1 Seq+ 92517 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1799812 + TACC3 chr4 1744518 + Exonic hg38 LIHC TCGA-CC-A3M9-01A 1 1 Out-of-frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 92518 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC4-THAP4 HDAC4 chr2 239352678 - THAP4 chr2 241606473 - Exonic hg38 LIHC TCGA-CC-A3MA-01A 38 125 In-Frame Intra-chr q37.3 q37.3 Transcription factor Seq+ 92519 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP54-TSPAN15 USP54 chr10 73625937 - TSPAN15 chr10 69483691 + Exonic hg38 LIHC TCGA-CC-A3MA-01A 26 6 5'UTR-5'UTR Intra-chr q22.2 q22.1 Seq+ 92520 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF115-FAM72D RNF115 chr1 145784539 - FAM72D chr1 145111503 + Exonic hg38 LIHC TCGA-CC-A3MA-01A 6 9 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 92521 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGT-H19 AGT chr1 230704193 - H19 chr11 1995794 - Exonic hg38 LIHC TCGA-CC-A3MB-01A 1 11 CDS-5'UTR Inter-chr q42.2 p15.5 Tumor suppressor gene 92522 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBTD2-STK10 UBTD2 chr5 172283596 - STK10 chr5 172127421 - Exonic hg38 LIHC TCGA-CC-A3MB-01A 1 11 Out-of-frame Intra-chr q35.1 q35.1 Tumor suppressor gene 92523 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTIF2-PPP3R1 MTIF2 chr2 55262316 - PPP3R1 chr2 68188690 - Exonic hg38 LIHC TCGA-CC-A3MB-01A 1 8 In-Frame Intra-chr p16.1 p14 Seq+ 92524 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERLEC1-CHAC2 ERLEC1 chr2 53794449 + CHAC2 chr2 53774142 + Exonic hg38 LIHC TCGA-CC-A3MC-01A 2 14 In-Frame Intra-chr p16.2 p16.2 Seq+ 92525 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYBL2-IFT52 MYBL2 chr20 43692319 + IFT52 chr20 43620857 + Exonic hg38 LIHC TCGA-CC-A3MC-01A 1 5 In-Frame Intra-chr q13.12 Transcription factor q13.12 Seq+ 92526 ChimerSeq TCGA FAWG TCGA_RNA-Seq ILF3-SMARCA4 ILF3 chr19 10671535 + SMARCA4 chr19 11023518 + Exonic hg38 LIHC TCGA-CC-A7IE-01A 18 49 In-Frame Intra-chr p13.2 p13.2 Oncogene Tumor suppressor gene Seq+ 92527 ChimerSeq TCGA FAWG TCGA_RNA-Seq TESK2-PRDX1 TESK2 chr1 45490852 - PRDX1 chr1 45511414 - Exonic hg38 LIHC TCGA-CC-A7IE-01A 4 30 5'UTR-CDS Intra-chr p34.1 TKL:LISK p34.1 Seq+ 92528 ChimerSeq TCGA FAWG TCGA_RNA-Seq PXN-GCN1 PXN chr12 120265617 - GCN1 chr12 120134726 - Exonic hg38 LIHC TCGA-CC-A7IE-01A 1 7 Out-of-frame Intra-chr q24.23 q24.23 92529 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFXN2-SUFU SFXN2 chr10 102714681 + SUFU chr10 102592582 + Exonic hg38 LIHC TCGA-CC-A7IG-01A 3 3 5'UTR-CDS Intra-chr q24.32 q24.32 Oncogene Tumor suppressor gene Seq+ 92530 ChimerSeq TCGA FAWG TCGA_RNA-Seq HERC1-PCLAF HERC1 chr15 63764096 - PCLAF chr15 64381038 - Exonic hg38 LIHC TCGA-CC-A7II-01A 1 2 Out-of-frame Intra-chr q22.31 q22.31 92531 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNND1-STARD10 CTNND1 chr11 57762046 + STARD10 chr11 72793924 - Exonic hg38 LIHC TCGA-CC-A7IJ-01A 7 36 5'UTR-5'UTR Intra-chr q12.1 Tumor suppressor gene q13.4 92532 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNMA1-DOCK1 KCNMA1 chr10 77120973 - DOCK1 chr10 127451332 + Exonic hg38 LIHC TCGA-CC-A7IJ-01A 2 19 Out-of-frame Intra-chr q22.3 q26.2 Seq+ 92533 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOB3A-VCL MOB3A chr19 2096226 - VCL chr10 74118023 + Exonic hg38 LIHC TCGA-CC-A7IJ-01A 5 5 5'UTR-CDS Inter-chr p13.3 q22.2 Seq+ 92534 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK1-AP3M1 DOCK1 chr10 127127764 + AP3M1 chr10 74138382 - Exonic hg38 LIHC TCGA-CC-A7IJ-01A 1 12 CDS-5'UTR Intra-chr q26.2 q22.2 Seq+ 92535 ChimerSeq TCGA FAWG TCGA_RNA-Seq SREBF1-DHRS4 SREBF1 chr17 17836727 - DHRS4 chr14 23955035 + Exonic hg38 LIHC TCGA-CC-A7IK-01A 1 4 CDS-3'UTR Inter-chr p11.2 Transcription factor q11.2 92536 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSD11B1-EPHX1 HSD11B1 chr1 209707128 + EPHX1 chr1 225828725 + Exonic hg38 LIHC TCGA-CC-A7IL-01A 1 1 CDS-5'UTR Intra-chr q32.2 q42.12 92537 ChimerSeq TCGA FAWG TCGA_RNA-Seq SULF2-BCAS1 SULF2 chr20 47676494 - BCAS1 chr20 54028972 - Exonic hg38 LIHC TCGA-CC-A8HS-01A 1 5 Out-of-frame Intra-chr q13.12 q13.2 Seq+ 92538 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRG-C3orf14 PTPRG chr3 61562372 + C3orf14 chr3 62319721 + Exonic hg38 LIHC TCGA-CC-A8HT-01A 3 6 CDS-5'UTR Intra-chr p14.2 p14.2 Seq+ 92539 ChimerSeq TCGA FAWG TCGA_RNA-Seq FANCA-SPIRE2 FANCA chr16 89769837 - SPIRE2 chr16 89845322 + Exonic hg38 LIHC TCGA-CC-A8HT-01A 1 12 Out-of-frame Intra-chr q24.3 Oncogene q24.3 Seq+ 92540 ChimerSeq TCGA FAWG TCGA_RNA-Seq LY6G5B-MICB LY6G5B chr6 31671284 + MICB chr6 31505617 + Exonic hg38 LIHC TCGA-CC-A8HT-01A 1 5 3'UTR-3'UTR Intra-chr 92541 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLMP-CCT3 GLMP chr1 156291403 - CCT3 chr1 156325089 - Exonic hg38 LIHC TCGA-CC-A8HU-01A 10 24 3'UTR-3'UTR Intra-chr q22 Transcription factor q22 92542 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPC5-MIR4500HG GPC5 chr13 92144989 + MIR4500HG chr13 87460969 - Exonic hg38 LIHC TCGA-CC-A8HU-01A 2 6 CDS-3'UTR Intra-chr q31.3 Tumor suppressor gene q31.2 Seq+ 92543 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO18A-SSH2 MYO18A chr17 29094650 - SSH2 chr17 29793937 - Exonic hg38 LIHC TCGA-CC-A8HV-01A 6 6 In-Frame Intra-chr q11.2 Oncogene q11.2 Seq+ 92544 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMYD4-PELP1 SMYD4 chr17 1783035 - PELP1 chr17 4691442 - Exonic hg38 LIHC TCGA-CC-A8HV-01A 3 13 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p13.2 Seq+ 92545 ChimerSeq TCGA FAWG TCGA_RNA-Seq SQLE-RBFOX3 SQLE chr8 125011632 + RBFOX3 chr17 79307824 - Exonic hg38 LIHC TCGA-CC-A8HV-01A 3 11 CDS-5'UTR Inter-chr q24.13 q25.3 Seq+ 92546 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP2-COL2A1 SRGAP2 chr1 206303473 + COL2A1 chr12 47998431 - Exonic hg38 LIHC TCGA-CC-A8HV-01A 2 12 Out-of-frame Inter-chr q32.1 Tumor suppressor gene q13.11 92547 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP2D6-SULT4A1 CYP2D6 chr22 42130612 - SULT4A1 chr22 43841932 - Exonic hg38 LIHC TCGA-CC-A8HV-01A 3 7 5'UTR-CDS Intra-chr Oncogene q13.31 Seq+ 92548 ChimerSeq TCGA FAWG TCGA_RNA-Seq LYRM4-EYS LYRM4 chr6 5260648 - EYS chr6 65335146 - Exonic hg38 LIHC TCGA-CC-A8HV-01A 1 4 Out-of-frame Intra-chr p25.1 q12 Seq+ 92549 ChimerSeq TCGA FAWG TCGA_RNA-Seq RELN-ORC5 RELN chr7 103535316 - ORC5 chr7 104126893 - Exonic hg38 LIHC TCGA-CC-A8HV-01A 1 3 In-Frame Intra-chr q22.1 q22.2 Seq+ 92550 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCT3-CD5L CCT3 chr1 156310558 - CD5L chr1 157833512 - Exonic hg38 LIHC TCGA-CC-A8HV-01A 1 2 Out-of-frame Intra-chr q22 q23.1 92551 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM2D2-IDO2 TM2D2 chr8 38996213 - IDO2 chr8 40013565 + Exonic hg38 LIHC TCGA-CC-A9FU-01A 8 59 In-Frame Intra-chr p11.22 p11.21 Seq+ 92552 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFC1-CORIN RFC1 chr4 39342345 - CORIN chr4 47680251 - Exonic hg38 LIHC TCGA-CC-A9FU-01A 8 48 In-Frame Intra-chr p14 p12 Seq+ 92553 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H7B-L3MBTL2 ZC3H7B chr22 41301772 + L3MBTL2 chr22 41219419 + Exonic hg38 LIHC TCGA-CC-A9FU-01A 3 60 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 92554 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHSG-TF AHSG chr3 186613354 + TF chr3 133764182 + Exonic hg38 LIHC TCGA-CC-A9FW-01A 1 8 In-Frame Intra-chr q27.3 q22.1 92555 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIMM50-CTF1 TIMM50 chr19 39486495 + CTF1 chr16 30899415 + Exonic hg38 LIHC TCGA-DD-A113-01A 10 27 CDS-3'UTR Inter-chr q13.2 p11.2 Seq+ 92556 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGKQ-POLN DGKQ chr4 986806 - POLN chr4 2095933 - Exonic hg38 LIHC TCGA-DD-A113-01A 3 20 5'UTR-CDS Intra-chr p16.3 p16.3 Seq+ 92557 ChimerSeq TCGA FAWG TCGA_RNA-Seq POU2F1-LCE2A POU2F1 chr1 167401556 + LCE2A chr1 152698882 + Exonic hg38 LIHC TCGA-DD-A113-01A 2 9 5'UTR-5'UTR Intra-chr q24.2 Transcription factor q21.3 Seq+ 92558 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHPRH-PKIB SHPRH chr6 145919348 - PKIB chr6 122717787 + Exonic hg38 LIHC TCGA-DD-A113-01A 1 11 Out-of-frame Intra-chr q24.3 Tumor suppressor gene q22.31 Seq+ 92559 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP19-CYB5A ARHGAP19 chr10 97292572 - CYB5A chr18 74263477 - Exonic hg38 LIHC TCGA-DD-A115-01A 40 48 Out-of-frame Inter-chr q24.1 q22.3 Tumor suppressor gene Seq+ 92560 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPT1A-ANPEP CPT1A chr11 68841775 - ANPEP chr15 89785501 - Exonic hg38 LIHC TCGA-DD-A115-01A 31 66 5'UTR-CDS Inter-chr q13.3 q26.1 Seq+ 92561 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKL1-SPIDR MKL1 chr22 40636478 - SPIDR chr8 47673801 + Exonic hg38 LIHC TCGA-DD-A115-01A 19 97 Out-of-frame Inter-chr q13.2 q11.21 92562 ChimerSeq TCGA FAWG TCGA_RNA-Seq CALD1-CGN CALD1 chr7 134891673 + CGN chr1 151518506 + Exonic hg38 LIHC TCGA-DD-A115-01A 9 39 CDS-5'UTR Inter-chr q33 q21.3 Seq+ 92563 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPM-GOLT1B CPM chr12 68932678 - GOLT1B chr12 21506885 + Exonic hg38 LIHC TCGA-DD-A115-01A 8 37 In-Frame Intra-chr q15 p12.1 Seq+ 92564 ChimerSeq TCGA FAWG TCGA_RNA-Seq COQ10A-NABP2 COQ10A chr12 56269561 + NABP2 chr12 56223584 + Exonic hg38 LIHC TCGA-DD-A115-01A 7 26 CDS-5'UTR Intra-chr q13.3 q13.3 92565 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABHD6-FLNB ABHD6 chr3 58256705 + FLNB chr3 58118872 + Exonic hg38 LIHC TCGA-DD-A115-01A 5 14 Out-of-frame Intra-chr p14.3 p14.3 Seq+ 92566 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLCO2B1-HNF4A SLCO2B1 chr11 75159872 + HNF4A chr20 44402554 + Exonic hg38 LIHC TCGA-DD-A115-01A 1 26 5'UTR-CDS Inter-chr q13.4 q13.12 Tumor suppressor gene Transcription factor Seq+ 92567 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKNA-WHRN AKNA chr9 114367543 - WHRN chr9 114426413 - Exonic hg38 LIHC TCGA-DD-A115-01A 2 10 In-Frame Intra-chr q32 Transcription factor q32 92568 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A30-CCDC107 SLC25A30 chr13 45408927 - CCDC107 chr9 35658576 + Exonic hg38 LIHC TCGA-DD-A115-01A 2 7 Out-of-frame Inter-chr q14.13 p13.3 Seq+ 92569 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP8B1-SLC50A1 ATP8B1 chr18 57695171 - SLC50A1 chr1 155136299 + Exonic hg38 LIHC TCGA-DD-A115-01A 1 4 Out-of-frame Inter-chr q21.31 q22 Seq+ 92570 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNN2-WDR18 CNN2 chr19 1026724 + WDR18 chr19 994020 + Exonic hg38 LIHC TCGA-DD-A116-01A 42 196 In-Frame Intra-chr p13.3 p13.3 Seq+ 92571 ChimerSeq TCGA FAWG TCGA_RNA-Seq S1PR2-FDX2 S1PR2 chr19 10224012 - FDX2 chr19 10310940 - Exonic hg38 LIHC TCGA-DD-A116-01A 3 24 Out-of-frame Intra-chr p13.2 p13.2 92572 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT14-FHIT GALNT14 chr2 30966204 - FHIT chr3 59752321 - Exonic hg38 LIHC TCGA-DD-A116-01A 1 2 Out-of-frame Inter-chr p23.1 p14.2 Tumor suppressor gene 92573 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHC1-NUP210L SHC1 chr1 154970032 - NUP210L chr1 154100143 - Exonic hg38 LIHC TCGA-DD-A118-01A 2 12 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 92574 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF557-MBD3L2 ZNF557 chr19 7070653 + MBD3L2 chr19 7051041 + Exonic hg38 LIHC TCGA-DD-A118-01A 2 12 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.2 Seq+ 92575 ChimerSeq TCGA FAWG TCGA_RNA-Seq POC1A-TWF2 POC1A chr3 52122379 - TWF2 chr3 52230995 - Exonic hg38 LIHC TCGA-DD-A118-01A 3 3 In-Frame Intra-chr p21.2 p21.2 Seq+ 92576 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF5-ERH DCAF5 chr14 69152765 - ERH chr14 69387083 - Exonic hg38 LIHC TCGA-DD-A11A-01A 10 134 In-Frame Intra-chr q24.1 q24.1 Seq+ 92577 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGGY-HOOK1 FGGY chr1 59607910 + HOOK1 chr1 59833405 + Exonic hg38 LIHC TCGA-DD-A11A-01A 2 8 In-Frame Intra-chr p32.1 p32.1 Seq+ 92578 ChimerSeq TCGA FAWG TCGA_RNA-Seq VAV1-C1orf198 VAV1 chr19 6843166 + C1orf198 chr1 230839908 - Exonic hg38 LIHC TCGA-DD-A11A-01A 1 12 Out-of-frame Inter-chr p13.3 q42.2 Seq+ 92579 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMED10-MRPL48 TMED10 chr14 75176355 - MRPL48 chr11 73844807 + Exonic hg38 LIHC TCGA-DD-A11C-01A 225 752 In-Frame Inter-chr q24.3 q13.4 Seq+ 92580 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPHX1-RAD51B EPHX1 chr1 225844623 + RAD51B chr14 68594485 + Exonic hg38 LIHC TCGA-DD-A11C-01A 28 91 Out-of-frame Inter-chr q42.12 q24.1 Seq+ 92581 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMBRD2-NADK2 LMBRD2 chr5 36151556 - NADK2 chr5 36207265 - Exonic hg38 LIHC TCGA-DD-A11C-01A 7 18 5'UTR-CDS Intra-chr p13.2 p13.2 92582 ChimerSeq TCGA FAWG TCGA_RNA-Seq STXBP2-TRIM4 STXBP2 chr19 7639807 + TRIM4 chr7 99892746 - Exonic hg38 LIHC TCGA-DD-A11C-01A 4 15 Out-of-frame Inter-chr p13.2 q22.1 Seq+ 92583 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREBBP-NLRC3 CREBBP chr16 3767720 - NLRC3 chr16 3548753 - Exonic hg38 LIHC TCGA-DD-A11C-01A 4 11 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 92584 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC61A1-KBTBD12 SEC61A1 chr3 128052902 + KBTBD12 chr3 127984097 + Exonic hg38 LIHC TCGA-DD-A11C-01A 1 21 Out-of-frame Intra-chr q21.3 q21.3 92585 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLMAP-CUL4B SLMAP chr3 57757849 + CUL4B chrX 120574630 - Exonic hg38 LIHC TCGA-DD-A11C-01A 1 21 CDS-5'UTR Inter-chr p14.3 q24 Seq+ 92586 ChimerSeq TCGA FAWG TCGA_RNA-Seq XRCC6-ACO2 XRCC6 chr22 41628230 + ACO2 chr22 41520171 + Exonic hg38 LIHC TCGA-DD-A11C-01A 2 16 CDS-5'UTR Intra-chr q13.2 q13.2 Seq+ 92587 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF213-HSD17B14 RNF213 chr17 80313167 + HSD17B14 chr19 48815141 - Exonic hg38 LIHC TCGA-DD-A11C-01A 5 2 In-Frame Inter-chr q25.3 Oncogene q13.33 Seq+ 92588 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD8-DPF2 FRMD8 chr11 65405068 + DPF2 chr11 65351683 + Exonic hg38 LIHC TCGA-DD-A11C-01A 3 9 In-Frame Intra-chr q13.1 q13.1 Seq+ 92589 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUL4B-DAPK2 CUL4B chrX 120557924 - DAPK2 chr15 63983754 - Exonic hg38 LIHC TCGA-DD-A11C-01A 3 5 Out-of-frame Inter-chr q24 q22.31 CAMK:DAPK Tumor suppressor gene Seq+ 92590 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2B2-YLPM1 EIF2B2 chr14 75006714 + YLPM1 chr14 74835265 + Exonic hg38 LIHC TCGA-DD-A11C-01A 2 5 In-Frame Intra-chr q24.3 q24.3 Seq+ 92591 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAP1A-C1orf162 RAP1A chr1 111627559 + C1orf162 chr1 111476018 + Exonic hg38 LIHC TCGA-DD-A11C-01A 1 8 5'UTR-5'UTR Intra-chr p13.2 Tumor suppressor gene p13.2 Seq+ 92592 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANXA6-CCDC69 ANXA6 chr5 151122147 - CCDC69 chr5 151187459 - Exonic hg38 LIHC TCGA-DD-A11C-01A 1 6 Out-of-frame Intra-chr q33.1 q33.1 92593 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATA6-RBBP8 GATA6 chr18 22183043 + RBBP8 chr18 22911600 + Exonic hg38 LIHC TCGA-DD-A11C-01A 1 5 CDS-5'UTR Intra-chr q11.2 Transcription factor q11.2 Tumor suppressor gene 92594 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDHC-UFC1 SDHC chr1 161328497 + UFC1 chr1 161153926 + Exonic hg38 LIHC TCGA-DD-A11C-01A 1 4 5'UTR-5'UTR Intra-chr q23.3 Oncogene q23.3 92595 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1A-PRKCZ ARID1A chr1 26762319 + PRKCZ chr1 2135262 + Exonic hg38 LIHC TCGA-DD-A11D-01A 8 20 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p36.33 Seq+ 92596 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYLIP-KHDC1L MYLIP chr6 16130747 + KHDC1L chr6 73225421 - Exonic hg38 LIHC TCGA-DD-A11D-01A 3 4 CDS-5'UTR Intra-chr p22.3 q13 Seq+ 92597 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARS2-IP6K3 RARS2 chr6 87589922 - IP6K3 chr6 33735655 - Exonic hg38 LIHC TCGA-DD-A11D-01A 2 4 CDS-5'UTR Intra-chr q15 p21.31 Seq+ 92598 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBRM1-NT5DC2 PBRM1 chr3 52668498 - NT5DC2 chr3 52525295 - Exonic hg38 LIHC TCGA-DD-A1EA-01A 31 114 In-Frame Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 92599 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP3CB-VMP1 PPP3CB chr10 73467553 - VMP1 chr17 59731421 + Exonic hg38 LIHC TCGA-DD-A1EB-01A 4 40 CDS-5'UTR Inter-chr q22.2 q23.1 Seq+ 92600 ChimerSeq TCGA FAWG TCGA_RNA-Seq IP6K1-MON1A IP6K1 chr3 49786354 - MON1A chr3 49913359 - Exonic hg38 LIHC TCGA-DD-A1EB-01A 3 20 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 92601 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXNB1-SLC26A6 PLXNB1 chr3 48419577 - SLC26A6 chr3 48629711 - Exonic hg38 LIHC TCGA-DD-A1EB-01A 3 20 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 92602 ChimerSeq TCGA FAWG TCGA_RNA-Seq VAMP1-CHD4 VAMP1 chr12 6464890 - CHD4 chr12 6602497 - Exonic hg38 LIHC TCGA-DD-A1EB-01A 2 13 In-Frame Intra-chr p13.31 p13.31 Seq+ 92603 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBA6-TMPRSS11D UBA6 chr4 67701049 - TMPRSS11D chr4 67884025 - Exonic hg38 LIHC TCGA-DD-A1EB-01A 1000 1000 CDS-5'UTR Intra-chr q13.2 q13.2 Seq+ 92604 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJB1-PRKACA DNAJB1 chr19 14518139 - PRKACA chr19 14107409 - Exonic hg38 LIHC TCGA-DD-A1EC-01A 246 1473 In-Frame Intra-chr p13.12 Tumor suppressor gene p13.12 KB Pub Seq+ 92605 ChimerSeq TCGA FAWG TCGA_RNA-Seq UGT1A6-GLUL UGT1A6 chr2 233691820 + GLUL chr1 182386402 - Exonic hg38 LIHC TCGA-DD-A1EE-01A 1 8 5'UTR-CDS Inter-chr q37.1 q25.3 92606 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLUL-CYP3A4 GLUL chr1 182391679 - CYP3A4 chr7 99770235 - Exonic hg38 LIHC TCGA-DD-A1EE-01A 1 7 5'UTR-CDS Inter-chr q25.3 q22.1 92607 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPA1-MICU1 PPA1 chr10 70233264 - MICU1 chr10 72508269 - Exonic hg38 LIHC TCGA-DD-A1EF-01A 1 33 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 92608 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF385A-CBX5 ZNF385A chr12 54373973 - CBX5 chr12 54257692 - Exonic hg38 LIHC TCGA-DD-A1EF-01A 1 4 CDS-5'UTR Intra-chr q13.13 Transcription factor q13.13 Tumor suppressor gene 92609 ChimerSeq TCGA FAWG TCGA_RNA-Seq APOB-CLU APOB chr2 21029639 - CLU chr8 27598635 - Exonic hg38 LIHC TCGA-DD-A1EH-01A 1 10 In-Frame Inter-chr p24.1 p21.1 Tumor suppressor gene 92610 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC3-MCF2L DNAJC3 chr13 95677337 + MCF2L chr13 113024644 + Exonic hg38 LIHC TCGA-DD-A1EJ-01A 12 35 In-Frame Intra-chr q32.1 q34 Seq+ 92611 ChimerSeq TCGA FAWG TCGA_RNA-Seq STRN3-MAML3 STRN3 chr14 31025904 - MAML3 chr4 139730667 - Exonic hg38 LIHC TCGA-DD-A1EJ-01A 11 27 In-Frame Inter-chr q12 q31.1 Seq+ 92612 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITPR2-DCDC2 ITPR2 chr12 26628033 - DCDC2 chr6 24278211 - Exonic hg38 LIHC TCGA-DD-A1EJ-01A 11 15 Out-of-frame Inter-chr p11.23 p22.3 Tumor suppressor gene Seq+ 92613 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2K-SLC9B2 UBE2K chr4 39755739 + SLC9B2 chr4 103031808 - Exonic hg38 LIHC TCGA-DD-A1EJ-01A 6 14 Out-of-frame Intra-chr p14 q24 Seq+ 92614 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCF2L-GAS6 MCF2L chr13 113014846 + GAS6 chr13 113848050 - Exonic hg38 LIHC TCGA-DD-A1EJ-01A 2 8 Out-of-frame Intra-chr q34 q34 Oncogene Seq+ 92615 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBD1-USP32 TUBD1 chr17 59878103 - USP32 chr17 60223586 - Exonic hg38 LIHC TCGA-DD-A1EJ-01A 1 7 In-Frame Intra-chr q23.1 q23.2 Seq+ 92616 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1799812 + TACC3 chr4 1744518 + Exonic hg38 LIHC TCGA-DD-A1EK-01A 946 2367 Out-of-frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 92617 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIPA1L3-C1QTNF3 SIPA1L3 chr19 37907358 + C1QTNF3 chr5 34035758 - Exonic hg38 LIHC TCGA-DD-A1EK-01A 3 30 5'UTR-CDS Inter-chr q13.13 p13.2 Seq+ 92618 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1109-CCNA2 KIAA1109 chr4 122154112 + CCNA2 chr4 121821091 - Exonic hg38 LIHC TCGA-DD-A1EK-01A 3 13 5'UTR-CDS Intra-chr q27 q27 Seq+ 92619 ChimerSeq TCGA FAWG TCGA_RNA-Seq PREX2-C8orf34 PREX2 chr8 68157436 + C8orf34 chr8 68437846 + Exonic hg38 LIHC TCGA-DD-A1EL-01A 7 53 CDS-5'UTR Intra-chr q13.2 q13.2 Seq+ 92620 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKAR-MFSD6 ANKAR chr2 189696369 + MFSD6 chr2 190488657 + Exonic hg38 LIHC TCGA-DD-A1EL-01A 2 12 In-Frame Intra-chr q32.2 q32.2 Seq+ 92621 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLIC4-CCDC28B CLIC4 chr1 24745625 + CCDC28B chr1 32201913 + Exonic hg38 LIHC TCGA-DD-A39V-01A 72 233 CDS-5'UTR Intra-chr p36.11 p35.2 Seq+ 92622 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADH1B-CES1 ADH1B chr4 99311521 - CES1 chr16 55833096 - Exonic hg38 LIHC TCGA-DD-A39W-01A 1 7 CDS-5'UTR Inter-chr q23 q12.2 92623 ChimerSeq TCGA FAWG TCGA_RNA-Seq WAPL-MMRN2 WAPL chr10 86517571 - MMRN2 chr10 86937125 - Exonic hg38 LIHC TCGA-DD-A39X-01A 5 24 In-Frame Intra-chr q23.2 q23.2 92624 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAT2-NUCB1 BCAT2 chr19 48810984 - NUCB1 chr19 48911149 + Exonic hg38 LIHC TCGA-DD-A39X-01A 2 10 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 92625 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPR2-GCKR NPR2 chr9 35799731 + GCKR chr2 27507681 + Exonic hg38 LIHC TCGA-DD-A39X-01A 2 1 In-Frame Inter-chr p13.3 Tumor suppressor gene p23.3 Seq+ 92626 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEMT-CCDC103 PEMT chr17 17576920 - CCDC103 chr17 44899384 + Exonic hg38 LIHC TCGA-DD-A39Y-01A 5 12 CDS-5'UTR Intra-chr p11.2 q21.31 92627 ChimerSeq TCGA FAWG TCGA_RNA-Seq C3-RFX2 C3 chr19 6720516 - RFX2 chr19 6078334 - Exonic hg38 LIHC TCGA-DD-A3A1-01A 243 1133 CDS-5'UTR Intra-chr p13.3 p13.3 Transcription factor 92628 ChimerSeq TCGA FAWG TCGA_RNA-Seq A2M-SERPINA1 A2M chr12 9080094 - SERPINA1 chr14 94378640 - Exonic hg38 LIHC TCGA-DD-A3A3-01A 2 11 CDS-5'UTR Inter-chr p13.31 q32.13 Seq+ 92629 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGFBP2-RPL37A IGFBP2 chr2 216633965 + RPL37A chr2 216520714 + Exonic hg38 LIHC TCGA-DD-A3A5-01A 34 300 CDS-3'UTR Intra-chr q35 q35 92630 ChimerSeq TCGA FAWG TCGA_RNA-Seq FTCD-SPATC1L FTCD chr21 46154149 - SPATC1L chr21 46168658 - Exonic hg38 LIHC TCGA-DD-A3A5-01A 27 71 5'UTR-5'UTR Intra-chr Seq+ 92631 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGCS1-SLC38A9 HMGCS1 chr5 43292474 - SLC38A9 chr5 55669879 - Exonic hg38 LIHC TCGA-DD-A3A5-01A 21 61 In-Frame Intra-chr p12 q11.2 Seq+ 92632 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACVR1B-ACVRL1 ACVR1B chr12 51951834 + ACVRL1 chr12 51912470 + Exonic hg38 LIHC TCGA-DD-A3A5-01A 6 43 CDS-5'UTR Intra-chr q13.13 Oncogene q13.13 Oncogene 92633 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRMU-TMEM184B TRMU chr22 46337944 + TMEM184B chr22 38231334 - Exonic hg38 LIHC TCGA-DD-A3A5-01A 1 14 In-Frame Intra-chr q13.31 q13.1 Seq+ 92634 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLGA8A-AQR GOLGA8A chr15 34404917 - AQR chr15 34852067 - Exonic hg38 LIHC TCGA-DD-A3A5-01A 3 4 3'UTR-3'UTR Intra-chr q14 q14 92635 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPP4-THSD7B DPP4 chr2 162073399 - THSD7B chr2 137056420 + Exonic hg38 LIHC TCGA-DD-A3A5-01A 2 5 In-Frame Intra-chr q24.2 Tumor suppressor gene q22.1 Seq+ 92636 ChimerSeq TCGA FAWG TCGA_RNA-Seq AAK1-RPIA AAK1 chr2 69556860 - RPIA chr2 88729278 + Exonic hg38 LIHC TCGA-DD-A3A5-01A 1 8 In-Frame Intra-chr p13.3 Other:NAK p11.2 Seq+ 92637 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBA6-CCNA2 UBA6 chr4 67701049 - CCNA2 chr4 121821091 - Exonic hg38 LIHC TCGA-DD-A3A5-01A 2 3 Out-of-frame Intra-chr q13.2 q27 Seq+ 92638 ChimerSeq TCGA FAWG TCGA_RNA-Seq THOP1-FTCD THOP1 chr19 2799791 + FTCD chr21 46137334 - Exonic hg38 LIHC TCGA-DD-A3A8-01A 2 1 CDS-5'UTR Inter-chr p13.3 Seq+ 92639 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCA-LRRC37A17P PRKCA chr17 66306127 + LRRC37A17P chr17 47021850 + Exonic hg38 LIHC TCGA-DD-A3A9-01A 3 5 Out-of-frame Intra-chr q24.2 q21.32 92640 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHPN2-SLC7A10 RHPN2 chr19 33044249 - SLC7A10 chr19 33213002 - Exonic hg38 LIHC TCGA-DD-A4NA-01A 290 952 In-Frame Intra-chr q13.11 q13.11 Seq+ 92641 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCDC2-GPLD1 DCDC2 chr6 24301715 - GPLD1 chr6 24437289 - Exonic hg38 LIHC TCGA-DD-A4NA-01A 1 15 Out-of-frame Intra-chr p22.3 Tumor suppressor gene p22.3 Seq+ 92642 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGAPB-LBP RALGAPB chr20 38473069 + LBP chr20 38371280 + Exonic hg38 LIHC TCGA-DD-A4NA-01A 3 2 5'UTR-CDS Intra-chr q11.23 q11.23 Seq+ 92643 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJB1-PRKACA DNAJB1 chr19 14518139 - PRKACA chr19 14107409 - Exonic hg38 LIHC TCGA-DD-A4NA-01A 1 2 In-Frame Intra-chr p13.12 Tumor suppressor gene p13.12 KB Pub Seq+ 92644 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJB1-PRKACA DNAJB1 chr19 14518139 - PRKACA chr19 14107409 - Exonic hg38 LIHC TCGA-DD-A4NB-01A 116 989 In-Frame Intra-chr p13.12 Tumor suppressor gene p13.12 KB Pub Seq+ 92645 ChimerSeq TCGA FAWG TCGA_RNA-Seq FADS2-SHANK2 FADS2 chr11 61828597 + SHANK2 chr11 71056558 - Exonic hg38 LIHC TCGA-DD-A4ND-01A 20 150 In-Frame Intra-chr q12.2 q13.4 92646 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM2A-NDUFV1 KDM2A chr11 67181892 + NDUFV1 chr11 67608396 + Exonic hg38 LIHC TCGA-DD-A4ND-01A 3 68 Out-of-frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 92647 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM2A-ADAM5 KDM2A chr11 67219403 + ADAM5 chr8 39417214 + Exonic hg38 LIHC TCGA-DD-A4ND-01A 5 20 CDS-3'UTR Inter-chr q13.2 Transcription factor p11.22 92648 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO1-RPLP0P2 ANO1 chr11 70153128 + RPLP0P2 chr11 61636129 + Exonic hg38 LIHC TCGA-DD-A4ND-01A 1 14 5'UTR-5'UTR Intra-chr q13.3 q12.2 92649 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCIRG1-H19 TCIRG1 chr11 68043907 + H19 chr11 1997275 - Exonic hg38 LIHC TCGA-DD-A4ND-01A 1 12 5'UTR-5'UTR Intra-chr q13.2 p15.5 Tumor suppressor gene 92650 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB7B-ZMPSTE24 ZBTB7B chr1 155002943 + ZMPSTE24 chr1 40267786 + Exonic hg38 LIHC TCGA-DD-A4NE-01A 10 33 5'UTR-CDS Intra-chr q21.3 Transcription factor p34.2 Seq+ 92651 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFYC-ZBTB7B NFYC chr1 40691867 + ZBTB7B chr1 155014655 + Exonic hg38 LIHC TCGA-DD-A4NE-01A 8 34 5'UTR-5'UTR Intra-chr p34.2 Transcription factor q21.3 Transcription factor Seq+ 92652 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASPH-DCLK1 ASPH chr8 61525977 - DCLK1 chr13 35822875 - Exonic hg38 LIHC TCGA-DD-A4NE-01A 3 8 Out-of-frame Inter-chr q12.3 q13.3 CAMK:DCAMKL Seq+ 92653 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK38-SRSF3 STK38 chr6 36515338 - SRSF3 chr6 36596761 + Exonic hg38 LIHC TCGA-DD-A4NE-01A 2 2 CDS-5'UTR Intra-chr p21.31 p21.31 Seq+ 92654 ChimerSeq TCGA FAWG TCGA_RNA-Seq SATB1-GOLGA5 SATB1 chr3 18394462 - GOLGA5 chr14 92797408 + Exonic hg38 LIHC TCGA-DD-A4NG-01A 6 4 CDS-5'UTR Inter-chr p24.3 Transcription factor q32.12 Seq+ 92655 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A26-LGMN SLC25A26 chr3 66263379 + LGMN chr14 92732815 - Exonic hg38 LIHC TCGA-DD-A4NG-01A 1 11 3'UTR-5'UTR Inter-chr q32.12 92656 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMBP-ORM1 AMBP chr9 114072925 - ORM1 chr9 114326292 + Exonic hg38 LIHC TCGA-DD-A4NH-01A 1 5 Out-of-frame Intra-chr q32 q32 92657 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITPR2-DDX11 ITPR2 chr12 26621123 - DDX11 chr12 31103317 + Exonic hg38 LIHC TCGA-DD-A4NH-01A 1 2 In-Frame Intra-chr p11.23 p11.21 92658 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENTPD5-MICU1 ENTPD5 chr14 73970010 - MICU1 chr10 72551341 - Exonic hg38 LIHC TCGA-DD-A4NN-01A 28 114 In-Frame Inter-chr q24.3 q22.1 Seq+ 92659 ChimerSeq TCGA FAWG TCGA_RNA-Seq PC-CAT PC chr11 66863774 - CAT chr11 34449192 + Exonic hg38 LIHC TCGA-DD-A4NN-01A 8 48 In-Frame Intra-chr q13.2 p13 Tumor suppressor gene Seq+ 92660 ChimerSeq TCGA FAWG TCGA_RNA-Seq AASDHPPT-ABTB2 AASDHPPT chr11 106079692 + ABTB2 chr11 34204690 - Exonic hg38 LIHC TCGA-DD-A4NN-01A 2 7 In-Frame Intra-chr q22.3 p13 Seq+ 92661 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMOX-SLC24A3 SMOX chr20 4148977 + SLC24A3 chr20 19654062 + Exonic hg38 LIHC TCGA-DD-A4NO-01A 1 14 5'UTR-CDS Intra-chr p13 p11.23 Seq+ 92662 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB8B-TLN2 RAB8B chr15 63189748 + TLN2 chr15 62738214 + Exonic hg38 LIHC TCGA-DD-A4NO-01A 2 3 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 92663 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP2E1-REG3A CYP2E1 chr10 133527572 + REG3A chr2 79157698 - Exonic hg38 LIHC TCGA-DD-A4NP-01A 2 19 In-Frame Inter-chr q26.3 p12 92664 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERPINC1-HP SERPINC1 chr1 173914553 - HP chr16 72059117 + Exonic hg38 LIHC TCGA-DD-A4NP-01A 2 16 Out-of-frame Inter-chr q25.1 q22.2 Tumor suppressor gene 92665 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDOB-C3 ALDOB chr9 101428469 - C3 chr19 6713509 - Exonic hg38 LIHC TCGA-DD-A4NV-01A 1 35 Out-of-frame Inter-chr q31.1 p13.3 92666 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDHB-C3orf67 PDHB chr3 58429708 - C3orf67 chr3 58753863 - Exonic hg38 LIHC TCGA-DD-A73A-01A 6 74 In-Frame Intra-chr p14.3 p14.2 Seq+ 92667 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAX-VAV2 BAX chr19 48960914 + VAV2 chr9 133764109 - Exonic hg38 LIHC TCGA-DD-A73A-01A 3 10 In-Frame Inter-chr q13.33 Tumor suppressor gene q34.2 Seq+ 92668 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZHX3-CHD6 ZHX3 chr20 41202057 - CHD6 chr20 41405489 - Exonic hg38 LIHC TCGA-DD-A73B-01A 3 21 Out-of-frame Intra-chr q12 Transcription factor q12 Seq+ 92669 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP1G1-PMFBP1 AP1G1 chr16 71769623 - PMFBP1 chr16 72154459 - Exonic hg38 LIHC TCGA-DD-A73C-01A 14 37 In-Frame Intra-chr q22.2 q22.2 Seq+ 92670 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC7A2-TERT SLC7A2 chr8 17502302 + TERT chr5 1282624 - Exonic hg38 LIHC TCGA-DD-A73C-01A 8 28 5'UTR-CDS Inter-chr p22 p15.33 Oncogene Seq+ 92671 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC152-HP CCDC152 chr5 42801141 + HP chr16 72060759 + Exonic hg38 LIHC TCGA-DD-A73C-01A 3 23 Out-of-frame Inter-chr p12 q22.2 Tumor suppressor gene Seq+ 92672 ChimerSeq TCGA FAWG TCGA_RNA-Seq TF-HMGCS2 TF chr3 133754671 + HMGCS2 chr1 119750908 - Exonic hg38 LIHC TCGA-DD-A73C-01A 1 10 In-Frame Inter-chr q22.1 p12 92673 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERPINA1-TF SERPINA1 chr14 94382592 - TF chr3 133753595 + Exonic hg38 LIHC TCGA-DD-A73C-01A 1 9 5'UTR-5'UTR Inter-chr q32.13 q22.1 92674 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITPK1-SPINK4 ITPK1 chr14 93115069 - SPINK4 chr9 33218365 + Exonic hg38 LIHC TCGA-DD-A73D-01A 7 10 5'UTR-5'UTR Inter-chr p13.3 Seq+ 92675 ChimerSeq TCGA FAWG TCGA_RNA-Seq PXK-FLNB PXK chr3 58333090 + FLNB chr3 58159554 + Exonic hg38 LIHC TCGA-DD-A73F-01A 18 77 In-Frame Intra-chr p14.3 p14.3 Seq+ 92676 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEBPG-GPATCH1 CEBPG chr19 33373895 + GPATCH1 chr19 33126588 + Exonic hg38 LIHC TCGA-DD-A73F-01A 15 50 5'UTR-5'UTR Intra-chr q13.11 Transcription factor q13.11 Seq+ 92677 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIFC3-CNGB1 KIFC3 chr16 57862729 - CNGB1 chr16 57897914 - Exonic hg38 LIHC TCGA-DD-A73F-01A 8 77 5'UTR-CDS Intra-chr q21 q21 Seq+ 92678 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNB1-TXNDC11 GNB1 chr1 1890820 - TXNDC11 chr16 11684245 - Exonic hg38 LIHC TCGA-DD-A73F-01A 12 17 5'UTR-CDS Inter-chr p36.33 p13.13 Seq+ 92679 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRG4-CROT PRRG4 chr11 32840239 + CROT chr7 87398524 + Exonic hg38 LIHC TCGA-DD-A73F-01A 5 43 In-Frame Inter-chr p13 q21.12 Seq+ 92680 ChimerSeq TCGA FAWG TCGA_RNA-Seq EMP2-TVP23A EMP2 chr16 10580549 - TVP23A chr16 10775096 - Exonic hg38 LIHC TCGA-DD-A73F-01A 8 21 5'UTR-CDS Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 92681 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLASRP-TMEM217 CLASRP chr19 45060627 + TMEM217 chr6 37219041 - Exonic hg38 LIHC TCGA-DD-A73F-01A 4 17 5'UTR-5'UTR Inter-chr q13.32 p21.2 Seq+ 92682 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNC1-THUMPD1 PITPNC1 chr17 67378202 + THUMPD1 chr16 20703909 - Exonic hg38 LIHC TCGA-DD-A73F-01A 5 13 CDS-3'UTR Inter-chr q24.2 p12.3 92683 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPZA2-ABCB1 CAPZA2 chr7 116811102 + ABCB1 chr7 87539345 - Exonic hg38 LIHC TCGA-DD-A73F-01A 4 7 5'UTR-CDS Intra-chr q31.2 q21.12 Seq+ 92684 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNIP1-CYP3A4 FNIP1 chr5 131796830 - CYP3A4 chr7 99758228 - Exonic hg38 LIHC TCGA-DD-A73F-01A 1 10 Out-of-frame Inter-chr q31.1 q22.1 92685 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC73-CAV1 CCDC73 chr11 32794613 - CAV1 chr7 116558946 + Exonic hg38 LIHC TCGA-DD-A73F-01A 2 3 5'UTR-CDS Inter-chr p13 q31.2 Tumor suppressor gene Seq+ 92686 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC29A1-RABEPK SLC29A1 chr6 44227342 + RABEPK chr9 125200780 + Exonic hg38 LIHC TCGA-DD-A73F-01A 1 6 CDS-5'UTR Inter-chr p21.1 q33.3 92687 ChimerSeq TCGA FAWG TCGA_RNA-Seq CROCC2-TMEM232 CROCC2 chr2 240968262 + TMEM232 chr5 110390640 - Exonic hg38 LIHC TCGA-DD-A73F-01A 1 4 CDS-3'UTR Inter-chr q37.3 q22.1 92688 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCA-RASGRF2 PRKCA chr17 66306127 + RASGRF2 chr5 81042877 + Exonic hg38 LIHC TCGA-DD-A73F-01A 1 4 Out-of-frame Inter-chr q24.2 q14.1 92689 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP18-DAPK2 USP18 chr22 18160268 + DAPK2 chr15 63983754 - Exonic hg38 LIHC TCGA-DD-A73F-01A 1 4 In-Frame Inter-chr q11.21 q22.31 CAMK:DAPK Tumor suppressor gene 92690 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFP-SMC1A AFP chr4 73447542 + SMC1A chrX 53422646 - Exonic hg38 LIHC TCGA-DD-A73F-01A 1000 1000 Out-of-frame Inter-chr q13.3 p11.22 92691 ChimerSeq TCGA FAWG TCGA_RNA-Seq F13B-NR1I3 F13B chr1 197040670 - NR1I3 chr1 161238205 - Exonic hg38 LIHC TCGA-DD-A73F-01A 1000 1000 Out-of-frame Intra-chr q31.3 q23.3 Transcription factor 92692 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIO-SNHG18 TRIO chr5 14420021 + SNHG18 chr5 9548990 + Exonic hg38 LIHC TCGA-DD-A73G-01A 23 83 5'UTR-5'UTR Intra-chr p15.2 p15.31 92693 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLLT10-SKIDA1 MLLT10 chr10 21617207 + SKIDA1 chr10 21523871 - Exonic hg38 LIHC TCGA-DD-A73G-01A 2 9 5'UTR-5'UTR Intra-chr p12.31 Oncogene p12.31 Seq+ 92694 ChimerSeq TCGA FAWG TCGA_RNA-Seq GCN1-PLA2G1B GCN1 chr12 120190298 - PLA2G1B chr12 120326020 - Exonic hg38 LIHC TCGA-DD-A73G-01A 1 6 In-Frame Intra-chr q24.23 q24.31 92695 ChimerSeq TCGA FAWG TCGA_RNA-Seq TESK2-PRDX1 TESK2 chr1 45490852 - PRDX1 chr1 45519054 - Exonic hg38 LIHC TCGA-DD-A73G-01A 1 4 5'UTR-5'UTR Intra-chr p34.1 TKL:LISK p34.1 Seq+ 92696 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR2-SMN1 FGFR2 chr10 121483698 - SMN1 chr5 70938839 + Exonic hg38 LIHC TCGA-DD-AA3A-01A 53 99 3'UTR-3'UTR Inter-chr q26.13 TK:FGFR Oncogene Seq+ 92697 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPHA6-TSC22D2 EPHA6 chr3 96866889 + TSC22D2 chr3 150457076 + Exonic hg38 LIHC TCGA-DD-AA3A-01A 5 22 Out-of-frame Intra-chr q11.2 q25.1 Seq+ 92698 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMN1-FGFR2 SMN1 chr5 70925184 + FGFR2 chr10 121480113 - Exonic hg38 LIHC TCGA-DD-AA3A-01A 2 11 3'UTR-3'UTR Inter-chr q26.13 TK:FGFR Oncogene 92699 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIPARP-LEKR1 TIPARP chr3 156696025 + LEKR1 chr3 156888297 + Exonic hg38 LIHC TCGA-DD-AACD-01A 4 6 Out-of-frame Intra-chr q25.31 q25.31 Seq+ 92700 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP85-CLIC4 CEP85 chr1 26239838 + CLIC4 chr1 24839860 + Exonic hg38 LIHC TCGA-DD-AACD-01A 3 3 In-Frame Intra-chr p36.11 p36.11 Seq+ 92701 ChimerSeq TCGA FAWG TCGA_RNA-Seq CS-SMARCC2 CS chr12 56285916 - SMARCC2 chr12 56171937 - Exonic hg38 LIHC TCGA-DD-AACE-01A 6 27 In-Frame Intra-chr q13.3 q13.2 92702 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF1-CDRT15L2 SMURF1 chr7 99081075 - CDRT15L2 chr17 20580149 + Exonic hg38 LIHC TCGA-DD-AACH-01A 15 37 Out-of-frame Inter-chr p11.2 Seq+ 92703 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCARB1-NDUFB10P1 SCARB1 chr12 124863595 - NDUFB10P1 chr15 57325855 - Exonic hg38 LIHC TCGA-DD-AACH-01A 3 12 Out-of-frame Inter-chr q24.31 q21.3 92704 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZSCAN25-SLC47A1P1 ZSCAN25 chr7 99617016 + SLC47A1P1 chr17 19594210 + Exonic hg38 LIHC TCGA-DD-AACH-01A 1 7 Out-of-frame Inter-chr q22.1 Transcription factor p11.2 92705 ChimerSeq TCGA FAWG TCGA_RNA-Seq ICE1-TERT ICE1 chr5 5447897 + TERT chr5 1282624 - Exonic hg38 LIHC TCGA-DD-AACS-01A 1 7 In-Frame Intra-chr p15.32 p15.33 Oncogene 92706 ChimerSeq TCGA FAWG TCGA_RNA-Seq AXIN1-NPRL3 AXIN1 chr16 346148 - NPRL3 chr16 119255 - Exonic hg38 LIHC TCGA-DD-AACU-01A 1 18 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 92707 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFE2L2-GAPVD1 NFE2L2 chr2 177232392 - GAPVD1 chr9 125321433 + Exonic hg38 LIHC TCGA-DD-AACU-01A 2 5 In-Frame Inter-chr q31.2 Oncogene Transcription factor q33.3 Seq+ 92708 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTBN4-RAD51B SPTBN4 chr19 40467305 + RAD51B chr14 68291884 + Exonic hg38 LIHC TCGA-DD-AACV-01A 1 6 5'UTR-CDS Inter-chr q13.2 q24.1 Seq+ 92709 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNPTG-HAGH GNPTG chr16 1352306 + HAGH chr16 1809833 - Exonic hg38 LIHC TCGA-DD-AACX-01A 1 2 Out-of-frame Intra-chr p13.3 p13.3 92710 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA6-PSMD13 NCOA6 chr20 34741558 - PSMD13 chr11 244041 + Exonic hg38 LIHC TCGA-DD-AAD0-01A 13 27 Out-of-frame Inter-chr q11.22 p15.5 Seq+ 92711 ChimerSeq TCGA FAWG TCGA_RNA-Seq QRICH1-TRAIP QRICH1 chr3 49076709 - TRAIP chr3 49832068 - Exonic hg38 LIHC TCGA-DD-AAD0-01A 1 10 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 92712 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP2A2-PKD1L3 AP2A2 chr11 977224 + PKD1L3 chr16 71980134 - Exonic hg38 LIHC TCGA-DD-AAD0-01A 1 7 3'UTR-CDS Inter-chr p15.5 q22.2 92713 ChimerSeq TCGA FAWG TCGA_RNA-Seq WRN-NRG1 WRN chr8 31167230 + NRG1 chr8 32727949 + Exonic hg38 LIHC TCGA-DD-AAD0-01A 2 3 Out-of-frame Intra-chr p12 Oncogene p12 Seq+ 92714 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP11C-CXorf66 ATP11C chrX 139932016 - CXorf66 chrX 139958217 - Exonic hg38 LIHC TCGA-DD-AAD1-01A 2 11 Out-of-frame Intra-chr q27.1 q27.1 Seq+ 92715 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCCA-MBNL2 PCCA chr13 100157340 + MBNL2 chr13 97391322 + Exonic hg38 LIHC TCGA-DD-AAD1-01A 2 3 In-Frame Intra-chr q32.3 q32.1 Transcription factor Seq+ 92716 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP11-PACS1 AKAP11 chr13 42303863 + PACS1 chr11 66193486 + Exonic hg38 LIHC TCGA-DD-AAD1-01A 2 2 In-Frame Inter-chr q14.11 q13.1 92717 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTDSS2-IFITM2 PTDSS2 chr11 460288 + IFITM2 chr11 314922 + Exonic hg38 LIHC TCGA-DD-AAD5-01A 24 62 3'UTR-3'UTR Intra-chr p15.5 Seq+ 92718 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTDSS2-IFITM1 PTDSS2 chr11 460288 + IFITM1 chr11 314922 + Exonic hg38 LIHC TCGA-DD-AAD5-01A 24 53 3'UTR-CDS Intra-chr p15.5 Oncogene Seq+ 92719 ChimerSeq TCGA FAWG TCGA_RNA-Seq IDUA-ALS2CR12 IDUA chr4 987949 + ALS2CR12 chr2 201289785 - Exonic hg38 LIHC TCGA-DD-AAD5-01A 9 33 Out-of-frame Inter-chr p16.3 q33.1 Seq+ 92720 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF213-SLC26A11 RNF213 chr17 80348286 + SLC26A11 chr17 80251329 + Exonic hg38 LIHC TCGA-DD-AAD6-01A 2 18 In-Frame Intra-chr q25.3 Oncogene q25.3 Pub Seq+ 92721 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLSTN3-LRRC23 CLSTN3 chr12 7143311 + LRRC23 chr12 6913891 + Exonic hg38 LIHC TCGA-DD-AADA-01A 154 489 In-Frame Intra-chr p13.31 p13.31 Seq+ 92722 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2F2-GPALPP1 GTF2F2 chr13 45252970 + GPALPP1 chr13 45014952 + Exonic hg38 LIHC TCGA-DD-AADA-01A 2 7 In-Frame Intra-chr q14.12 q14.12 Seq+ 92723 ChimerSeq TCGA FAWG TCGA_RNA-Seq AXIN1-LUC7L AXIN1 chr16 304304 - LUC7L chr16 199238 - Exonic hg38 LIHC TCGA-DD-AADB-01A 2 2 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 92724 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF1AD-CATSPER1 EIF1AD chr11 65999350 - CATSPER1 chr11 66017174 - Exonic hg38 LIHC TCGA-DD-AADB-01A 1 3 In-Frame Intra-chr q13.1 q13.1 Seq+ 92725 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLTC-PRKCA CLTC chr17 59620173 + PRKCA chr17 66687111 + Exonic hg38 LIHC TCGA-DD-AADC-01A 4 21 Out-of-frame Intra-chr q23.1 q24.2 Seq+ 92726 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCA-RPS6KB1 PRKCA chr17 66687267 + RPS6KB1 chr17 59910562 + Exonic hg38 LIHC TCGA-DD-AADC-01A 3 19 Out-of-frame Intra-chr q24.2 q23.1 Oncogene Seq+ 92727 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOSC5-FCGBP EXOSC5 chr19 41387514 - FCGBP chr19 39863892 - Exonic hg38 LIHC TCGA-DD-AADC-01A 3 6 CDS-5'UTR Intra-chr q13.2 Seq+ 92728 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTRF-HEATR6 PTRF chr17 42422627 - HEATR6 chr17 60048388 - Exonic hg38 LIHC TCGA-DD-AADC-01A 3 4 Out-of-frame Intra-chr q23.1 Seq+ 92729 ChimerSeq TCGA FAWG TCGA_RNA-Seq TF-CLDN11 TF chr3 133766433 + CLDN11 chr3 170502811 + Exonic hg38 LIHC TCGA-DD-AADC-01A 3 4 CDS-3'UTR Intra-chr q22.1 q26.2 92730 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMPX-MID1 SMPX chrX 21737549 - MID1 chrX 10501559 - Exonic hg38 LIHC TCGA-DD-AADC-01A 2 2 3'UTR-CDS Intra-chr p22.12 p22.2 92731 ChimerSeq TCGA FAWG TCGA_RNA-Seq STXBP4-GRN STXBP4 chr17 54990957 + GRN chr17 44352341 + Exonic hg38 LIHC TCGA-DD-AADC-01A 2 1 In-Frame Intra-chr q22 q21.31 Seq+ 92732 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCCA-ARL4D PCCA chr13 100425731 + ARL4D chr17 43399661 + Exonic hg38 LIHC TCGA-DD-AADF-01A 1 8 5'UTR-5'UTR Inter-chr q32.3 q21.31 92733 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHMP4B-SYCP2L CHMP4B chr20 33811658 + SYCP2L chr6 10955116 + Exonic hg38 LIHC TCGA-DD-AADF-01A 1 4 In-Frame Inter-chr q11.22 p24.2 92734 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPS5-MTCO1P7 COPS5 chr8 67056568 - MTCO1P7 chr2 130275241 + Exonic hg38 LIHC TCGA-DD-AADG-01A 7 0 Out-of-frame Inter-chr q13.1 q21.1 92735 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R42-MTCO1P7 PPP1R42 chr8 67056568 - MTCO1P7 chr2 130275241 + Exonic hg38 LIHC TCGA-DD-AADG-01A 7 0 Out-of-frame Inter-chr q13.1 q21.1 92736 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KA3-EIF1AX RPS6KA3 chrX 20266564 - EIF1AX chrX 20135841 - Exonic hg38 LIHC TCGA-DD-AADJ-01A 27 40 Out-of-frame Intra-chr p22.12 p22.12 Seq+ 92737 ChimerSeq TCGA FAWG TCGA_RNA-Seq UPF3A-CDC16 UPF3A chr13 114286629 + CDC16 chr13 114261887 + Exonic hg38 LIHC TCGA-DD-AADJ-01A 2 17 Out-of-frame Intra-chr q34 q34 Seq+ 92738 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC14L2-CCDC157 SEC14L2 chr22 30416403 + CCDC157 chr22 30361961 + Exonic hg38 LIHC TCGA-DD-AADL-01A 6 45 CDS-5'UTR Intra-chr q12.2 Tumor suppressor gene q12.2 Seq+ 92739 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDH1L1-SLC41A3 ALDH1L1 chr3 126153444 - SLC41A3 chr3 126051050 - Exonic hg38 LIHC TCGA-DD-AADM-01A 16 60 In-Frame Intra-chr q21.3 q21.3 Seq+ 92740 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFMBT1-ITIH4 SFMBT1 chr3 53018086 - ITIH4 chr3 52814071 - Exonic hg38 LIHC TCGA-DD-AADM-01A 7 96 5'UTR-CDS Intra-chr p21.1 p21.1 Seq+ 92741 ChimerSeq TCGA FAWG TCGA_RNA-Seq ECD-MRPS16 ECD chr10 73134603 - MRPS16 chr10 73250991 - Exonic hg38 LIHC TCGA-DD-AADN-01A 2 3 Out-of-frame Intra-chr q22.2 q22.2 92742 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBF2-C11orf49 SBF2 chr11 10193902 - C11orf49 chr11 47052388 + Exonic hg38 LIHC TCGA-DD-AADP-01A 3 60 Out-of-frame Intra-chr p15.4 p11.2 Seq+ 92743 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSF1-CLNS1A RSF1 chr11 77740731 - CLNS1A chr11 77629899 - Exonic hg38 LIHC TCGA-DD-AADP-01A 8 17 In-Frame Intra-chr q14.1 q14.1 Seq+ 92744 ChimerSeq TCGA FAWG TCGA_RNA-Seq ISG20L2-HDGF ISG20L2 chr1 156726906 - HDGF chr1 156759219 - Exonic hg38 LIHC TCGA-DD-AADP-01A 2 8 CDS-5'UTR Intra-chr q23.1 q23.1 Seq+ 92745 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASSF3-XPOT RASSF3 chr12 64684894 + XPOT chr12 64431538 + Exonic hg38 LIHC TCGA-DD-AADP-01A 2 2 Out-of-frame Intra-chr q14.2 Tumor suppressor gene q14.2 92746 ChimerSeq TCGA FAWG TCGA_RNA-Seq DBT-SASS6 DBT chr1 100235436 - SASS6 chr1 100121549 - Exonic hg38 LIHC TCGA-DD-AADR-01A 2 5 In-Frame Intra-chr p21.2 p21.2 Seq+ 92747 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPATCH3-KDF1 GPATCH3 chr1 26893389 - KDF1 chr1 26952412 - Exonic hg38 LIHC TCGA-DD-AADV-01A 2 10 CDS-5'UTR Intra-chr p36.11 p36.11 92748 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K13-EHHADH MAP3K13 chr3 185328962 + EHHADH chr3 185235462 - Exonic hg38 LIHC TCGA-DD-AADV-01A 1 2 5'UTR-5'UTR Intra-chr q27.2 q27.2 92749 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLF15-ABI3BP KLF15 chr3 126351841 - ABI3BP chr3 100775335 - Exonic hg38 LIHC TCGA-DD-AADV-01A 1 1 Out-of-frame Intra-chr q21.3 Transcription factor q12.2 92750 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM168A-PPME1 FAM168A chr11 73597923 - PPME1 chr11 74203728 + Exonic hg38 LIHC TCGA-DD-AADY-01A 6 11 5'UTR-CDS Intra-chr q13.4 q13.4 Seq+ 92751 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF121-SLC22A8 RNF121 chr11 71960891 + SLC22A8 chr11 62996152 - Exonic hg38 LIHC TCGA-DD-AADY-01A 4 14 Out-of-frame Intra-chr q13.4 q12.3 Seq+ 92752 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACROD1-PDE2A MACROD1 chr11 64151239 - PDE2A chr11 72631139 - Exonic hg38 LIHC TCGA-DD-AADY-01A 1 3 In-Frame Intra-chr q13.1 q13.4 92753 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL48-LRP5 MRPL48 chr11 73825796 + LRP5 chr11 68347847 + Exonic hg38 LIHC TCGA-DD-AADY-01A 1 3 Out-of-frame Intra-chr q13.4 q13.2 92754 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB6A-TUT1 RAB6A chr11 73707420 - TUT1 chr11 62577291 - Exonic hg38 LIHC TCGA-DD-AADY-01A 1 3 Out-of-frame Intra-chr q13.4 q12.3 Seq+ 92755 ChimerSeq TCGA FAWG TCGA_RNA-Seq FTL-H19 FTL chr19 48965609 + H19 chr11 1995794 - Exonic hg38 LIHC TCGA-DD-AAE1-01A 1 181 CDS-5'UTR Inter-chr q13.33 p15.5 Tumor suppressor gene 92756 ChimerSeq TCGA FAWG TCGA_RNA-Seq H19_2-ORM2 H19_2 chr11 1997539 + ORM2 chr9 114329873 + Exonic hg38 LIHC TCGA-DD-AAE1-01A 3 11 Out-of-frame Inter-chr q32 92757 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL6R-TDRD10 IL6R chr1 154436110 + TDRD10 chr1 154542024 + Exonic hg38 LIHC TCGA-DD-AAE1-01A 2 3 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 92758 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPN5-HSD17B14 CAPN5 chr11 77093813 + HSD17B14 chr19 48815141 - Exonic hg38 LIHC TCGA-DD-AAE2-01A 102 245 In-Frame Inter-chr q13.5 q13.33 Seq+ 92759 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANBP10-LCAT RANBP10 chr16 67738013 - LCAT chr16 67940478 - Exonic hg38 LIHC TCGA-DD-AAE2-01A 11 65 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 92760 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL26-TMEM59L KLHL26 chr19 18668441 + TMEM59L chr19 18613872 + Exonic hg38 LIHC TCGA-DD-AAE2-01A 10 27 In-Frame Intra-chr p13.11 p13.11 Seq+ 92761 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF144B-CFAP206 RNF144B chr6 18399699 + CFAP206 chr6 87464020 + Exonic hg38 LIHC TCGA-DD-AAE2-01A 7 29 In-Frame Intra-chr p22.3 q15 92762 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB7A-WDR5 RAB7A chr3 128726359 + WDR5 chr9 134139820 + Exonic hg38 LIHC TCGA-DD-AAE2-01A 7 8 5'UTR-5'UTR Inter-chr q21.3 Tumor suppressor gene q34.2 Seq+ 92763 ChimerSeq TCGA FAWG TCGA_RNA-Seq UGT2B11-SULT1D1P UGT2B11 chr4 69214002 - SULT1D1P chr4 69800883 - Exonic hg38 LIHC TCGA-DD-AAE2-01A 2 25 Out-of-frame Intra-chr q13.2 q13.3 Seq+ 92764 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADI1-DPY30 ADI1 chr2 3519368 - DPY30 chr2 32039492 - Exonic hg38 LIHC TCGA-DD-AAE2-01A 4 10 5'UTR-5'UTR Intra-chr p22.3 Seq+ 92765 ChimerSeq TCGA FAWG TCGA_RNA-Seq GUSBP11-GGT5 GUSBP11 chr22 23700726 - GGT5 chr22 24226767 - Exonic hg38 LIHC TCGA-DD-AAE2-01A 2 10 3'UTR-CDS Intra-chr q11.23 q11.23 92766 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX19B-ST3GAL2 DDX19B chr16 70299354 + ST3GAL2 chr16 70399533 - Exonic hg38 LIHC TCGA-DD-AAE2-01A 1 4 5'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 92767 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF10L-PYCR1 ARHGEF10L chr1 17539950 + PYCR1 chr17 81936861 - Exonic hg38 LIHC TCGA-DD-AAE2-01A 1 2 5'UTR-5'UTR Inter-chr p36.13 q25.3 92768 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPECC1L-RAD51B SPECC1L chr22 24270983 + RAD51B chr14 68729808 + Exonic hg38 LIHC TCGA-DD-AAE4-01A 16 30 5'UTR-3'UTR Inter-chr q11.23 q24.1 Seq+ 92769 ChimerSeq TCGA FAWG TCGA_RNA-Seq F5-SCYL3 F5 chr1 169530786 - SCYL3 chr1 169888890 - Exonic hg38 LIHC TCGA-DD-AAE4-01A 2 8 CDS-5'UTR Intra-chr q24.2 q24.2 Other:SCY1 Seq+ 92770 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED9-NT5M MED9 chr17 17477265 + NT5M chr17 17344794 + Exonic hg38 LIHC TCGA-DD-AAE4-01A 1 3 Out-of-frame Intra-chr p11.2 p11.2 92771 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP7A-COX7B ATP7A chrX 77910835 + COX7B chrX 77899477 + Exonic hg38 LIHC TCGA-DD-AAE9-01A 5 17 5'UTR-5'UTR Intra-chr q21.1 q21.1 92772 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCC2-CTNNA3 ABCC2 chr10 99784781 + CTNNA3 chr10 65920617 - Exonic hg38 LIHC TCGA-DD-AAEA-01A 192 315 In-Frame Intra-chr q24.2 q21.3 Tumor suppressor gene Seq+ 92773 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD28-COLQ ANKRD28 chr3 15751750 - COLQ chr3 15466437 - Exonic hg38 LIHC TCGA-DD-AAEE-01A 17 29 In-Frame Intra-chr p25.1 p25.1 Seq+ 92774 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEBPZ-MAP4K3 CEBPZ chr2 37228949 - MAP4K3 chr2 39250705 - Exonic hg38 LIHC TCGA-DD-AAEG-01A 5 9 In-Frame Intra-chr p22.2 Transcription factor p22.1 Seq+ 92775 ChimerSeq TCGA FAWG TCGA_RNA-Seq HS2ST1-SH3GLB1 HS2ST1 chr1 86915160 + SH3GLB1 chr1 86719507 + Exonic hg38 LIHC TCGA-DD-AAEG-01A 2 7 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 92776 ChimerSeq TCGA FAWG TCGA_RNA-Seq HAMP-GPI HAMP chr19 35282667 + GPI chr19 34393248 + Exonic hg38 LIHC TCGA-DD-AAEG-01A 2 5 In-Frame Intra-chr q13.12 92777 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM143-DBP TMEM143 chr19 48342530 - DBP chr19 48631052 - Exonic hg38 LIHC TCGA-DD-AAEG-01A 1 4 CDS-5'UTR Intra-chr q13.33 q13.33 Transcription factor 92778 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARMCX4-BTK ARMCX4 chrX 101419000 + BTK chrX 101371701 - Exonic hg38 LIHC TCGA-DD-AAEH-01A 2 14 5'UTR-CDS Intra-chr q22.1 q22.1 TK:Tec Oncogene Tumor suppressor gene 92779 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNPTG-HAGH GNPTG chr16 1352306 + HAGH chr16 1809833 - Exonic hg38 LIHC TCGA-DD-AAEH-01A 1 1 Out-of-frame Intra-chr p13.3 p13.3 92780 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D22A-DRAIC TBC1D22A chr22 46774235 + DRAIC chr15 69548354 + Exonic hg38 LIHC TCGA-DD-AAEI-01A 1 8 5'UTR-5'UTR Inter-chr q13.31 q23 92781 ChimerSeq TCGA FAWG TCGA_RNA-Seq UFSP2-CCDC110 UFSP2 chr4 185413726 - CCDC110 chr4 185445542 - Exonic hg38 LIHC TCGA-DD-AAVP-01A 2 3 Out-of-frame Intra-chr q35.1 q35.1 Seq+ 92782 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP2C19-TBC1D12 CYP2C19 chr10 94781997 + TBC1D12 chr10 94531202 + Exonic hg38 LIHC TCGA-DD-AAVR-01A 1 3 Out-of-frame Intra-chr q23.33 Oncogene q23.33 Seq+ 92783 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGST1-ADTRP MGST1 chr12 16357699 + ADTRP chr6 11723500 - Exonic hg38 LIHC TCGA-DD-AAVR-01A 1 3 In-Frame Inter-chr p12.3 p24.1 92784 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM105A-DNAH5 FAM105A chr5 14602332 + DNAH5 chr5 13917256 - Exonic hg38 LIHC TCGA-DD-AAVV-01A 5 28 Out-of-frame Intra-chr p15.2 p15.2 Seq+ 92785 ChimerSeq TCGA FAWG TCGA_RNA-Seq APOL6-CUX2 APOL6 chr22 35648623 + CUX2 chr12 111334441 + Exonic hg38 LIHC TCGA-DD-AAVW-01A 2 7 5'UTR-CDS Inter-chr q12.3 q24.11 Transcription factor Seq+ 92786 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLG-CGNL1 POLG chr15 89323404 - CGNL1 chr15 57516780 + Exonic hg38 LIHC TCGA-DD-AAVW-01A 2 6 In-Frame Intra-chr q26.1 q21.3 Seq+ 92787 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC20A2-TMIGD3 SLC20A2 chr8 42541538 - TMIGD3 chr1 111488867 - Exonic hg38 LIHC TCGA-DD-AAVZ-01A 25 137 5'UTR-CDS Inter-chr p11.21 p13.2 92788 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOCS5-SLC8A1 SOCS5 chr2 46699449 + SLC8A1 chr2 40453349 - Exonic hg38 LIHC TCGA-DD-AAW0-01A 3 5 5'UTR-5'UTR Intra-chr p21 p22.1 Seq+ 92789 ChimerSeq TCGA FAWG TCGA_RNA-Seq HP-SAA1 HP chr16 72056243 + SAA1 chr11 18266264 + Exonic hg38 LIHC TCGA-ED-A459-01A 1 31 CDS-5'UTR Inter-chr q22.2 Tumor suppressor gene p15.1 Tumor suppressor gene 92790 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLRG1-FGG PLRG1 chr4 154545836 - FGG chr4 154604354 - Exonic hg38 LIHC TCGA-ED-A459-01A 1 8 In-Frame Intra-chr q31.3 q32.1 92791 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERMP1-PLGRKT ERMP1 chr9 5805027 - PLGRKT chr9 5361888 - Exonic hg38 LIHC TCGA-ED-A459-01A 1 5 In-Frame Intra-chr p24.1 p24.1 92792 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITIH2-TAF3 ITIH2 chr10 7713285 + TAF3 chr10 8009078 + Exonic hg38 LIHC TCGA-ED-A4XI-01A 2 6 In-Frame Intra-chr p14 p14 Seq+ 92793 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCY9-JADE3 ADCY9 chr16 4113750 - JADE3 chrX 46984884 + Exonic hg38 LIHC TCGA-ED-A4XI-01A 2 4 CDS-5'UTR Inter-chr p13.3 p11.3 92794 ChimerSeq TCGA FAWG TCGA_RNA-Seq NT5DC1-DSE NT5DC1 chr6 116117945 + DSE chr6 116399198 + Exonic hg38 LIHC TCGA-ED-A4XI-01A 1 5 In-Frame Intra-chr q22.1 q22.1 92795 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCT3-IQGAP3 CCT3 chr1 156324972 - IQGAP3 chr1 156525552 - Exonic hg38 LIHC TCGA-ED-A627-01A 2 3 3'UTR-3'UTR Intra-chr q22 q22 Seq+ 92796 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR2-BICC1 FGFR2 chr10 121483698 - BICC1 chr10 58702074 + Exonic hg38 LIHC TCGA-ED-A7PX-01A 62 109 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q21.1 Seq+ 92797 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D2B-CIB2 TBC1D2B chr15 78054034 - CIB2 chr15 78111276 - Exonic hg38 LIHC TCGA-ED-A7PX-01A 25 82 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 92798 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBAP2-KIF24 UBAP2 chr9 34048825 - KIF24 chr9 34263172 - Exonic hg38 LIHC TCGA-ED-A7PX-01A 22 12 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 92799 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMYD2-PROX1 SMYD2 chr1 214327724 + PROX1 chr1 214035649 + Exonic hg38 LIHC TCGA-ED-A7PX-01A 9 27 In-Frame Intra-chr q32.3 q32.3 Tumor suppressor gene Transcription factor Seq+ 92800 ChimerSeq TCGA FAWG TCGA_RNA-Seq SP2-KPNB1 SP2 chr17 47897927 + KPNB1 chr17 47669678 + Exonic hg38 LIHC TCGA-ED-A7PX-01A 5 11 Out-of-frame Intra-chr q21.32 Transcription factor q21.32 Seq+ 92801 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC2-MRC2 TANC2 chr17 63009626 + MRC2 chr17 62664548 + Exonic hg38 LIHC TCGA-ED-A7PX-01A 5 7 In-Frame Intra-chr q23.2 q23.2 Seq+ 92802 ChimerSeq TCGA FAWG TCGA_RNA-Seq KBTBD2-NT5C3A KBTBD2 chr7 32891536 - NT5C3A chr7 33035988 - Exonic hg38 LIHC TCGA-ED-A7PX-01A 2 5 5'UTR-5'UTR Intra-chr p14.3 p14.3 Seq+ 92803 ChimerSeq TCGA FAWG TCGA_RNA-Seq NECTIN2-CCL21 NECTIN2 chr19 44846613 + CCL21 chr9 34709897 - Exonic hg38 LIHC TCGA-ED-A7XO-01A 14 62 In-Frame Inter-chr q13.32 p13.3 92804 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCARB2-NIPSNAP1 SCARB2 chr4 76213427 - NIPSNAP1 chr22 29561862 - Exonic hg38 LIHC TCGA-ED-A7XO-01A 15 48 Out-of-frame Inter-chr q21.1 q12.2 Seq+ 92805 ChimerSeq TCGA FAWG TCGA_RNA-Seq PC-MX2 PC chr11 66952430 - MX2 chr21 41390565 + Exonic hg38 LIHC TCGA-ED-A7XO-01A 3 35 5'UTR-CDS Inter-chr q13.2 q22.3 Seq+ 92806 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABHD6-FLNB ABHD6 chr3 58237916 + FLNB chr3 58118872 + Exonic hg38 LIHC TCGA-ED-A7XO-01A 5 12 5'UTR-CDS Intra-chr p14.3 p14.3 Seq+ 92807 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPP5-FAM71D MPP5 chr14 67241533 + FAM71D chr14 67203094 + Exonic hg38 LIHC TCGA-ED-A7XO-01A 2 5 5'UTR-CDS Intra-chr q23.3 q23.3 KB Pub Seq+ 92808 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLPH-RAMP1 MLPH chr2 237493536 + RAMP1 chr2 237911528 + Exonic hg38 LIHC TCGA-ED-A7XP-01A 3 18 In-Frame Intra-chr q37.3 q37.3 Seq+ 92809 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLU-MT1G CLU chr8 27598099 - MT1G chr16 56668033 - Exonic hg38 LIHC TCGA-ED-A7XP-01A 4 11 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q13 Tumor suppressor gene Seq+ 92810 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM172A-MCTP1 FAM172A chr5 94050731 - MCTP1 chr5 95017484 - Exonic hg38 LIHC TCGA-ED-A82E-01A 7 32 In-Frame Intra-chr q15 Tumor suppressor gene q15 Seq+ 92811 ChimerSeq TCGA FAWG TCGA_RNA-Seq EDA-FAAH2 EDA chrX 69616704 + FAAH2 chrX 57292498 + Exonic hg38 LIHC TCGA-ED-A82E-01A 1 48 In-Frame Intra-chr q13.1 p11.21 Seq+ 92812 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGD4-CD4 FGD4 chr12 32611283 + CD4 chr12 6816056 + Exonic hg38 LIHC TCGA-ED-A82E-01A 9 10 Out-of-frame Intra-chr p11.21 p13.31 Tumor suppressor gene Seq+ 92813 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC38A1-UNKL SLC38A1 chr12 46229153 - UNKL chr16 1403344 - Exonic hg38 LIHC TCGA-ED-A82E-01A 3 16 In-Frame Inter-chr q13.11 p13.3 Seq+ 92814 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB2B-AZIN1 RAB2B chr14 21474867 - AZIN1 chr8 102858150 - Exonic hg38 LIHC TCGA-ED-A82E-01A 1 9 CDS-5'UTR Inter-chr q11.2 q22.3 Seq+ 92815 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR2F-EIF3L POLR2F chr22 37967170 + EIF3L chr22 37855565 + Exonic hg38 LIHC TCGA-ED-A82E-01A 2 2 In-Frame Intra-chr q13.1 q13.1 Seq+ 92816 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPYD-RGS5 DPYD chr1 97883264 - RGS5 chr1 163168368 - Exonic hg38 LIHC TCGA-ED-A97K-01A 3 10 Out-of-frame Intra-chr p21.3 Oncogene q23.3 Seq+ 92817 ChimerSeq TCGA FAWG TCGA_RNA-Seq HID1-DNAH17 HID1 chr17 74972591 - DNAH17 chr17 78510506 - Exonic hg38 LIHC TCGA-ED-A97K-01A 2 5 In-Frame Intra-chr q25.1 q25.3 Seq+ 92818 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAU2-RALYL STAU2 chr8 73746783 - RALYL chr8 84873284 + Exonic hg38 LIHC TCGA-EP-A12J-01A 23 19 5'UTR-CDS Intra-chr q21.11 q21.2 Seq+ 92819 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSSCA1-FRMD8 SSSCA1 chr11 65570970 + FRMD8 chr11 65411242 + Exonic hg38 LIHC TCGA-EP-A12J-01A 2 4 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 92820 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF25-ZC3H18 TCF25 chr16 89900794 + ZC3H18 chr16 88631489 + Exonic hg38 LIHC TCGA-EP-A2KA-01A 14 154 CDS-3'UTR Intra-chr q24.3 q24.2 Seq+ 92821 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK19-LY6G6D STK19 chr6 31979553 + LY6G6D chr6 31715502 + Exonic hg38 LIHC TCGA-EP-A2KA-01A 22 63 3'UTR-3'UTR Intra-chr Seq+ 92822 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWP1-LRRCC1 WWP1 chr8 86342930 + LRRCC1 chr8 85141382 + Exonic hg38 LIHC TCGA-EP-A2KA-01A 21 23 5'UTR-CDS Intra-chr q21.3 q21.2 Seq+ 92823 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTMR3-TSHZ2 MTMR3 chr22 29883359 + TSHZ2 chr20 53487144 + Exonic hg38 LIHC TCGA-EP-A2KA-01A 16 23 5'UTR-3'UTR Inter-chr q12.2 q13.2 Transcription factor Seq+ 92824 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST7-FOXP2 ST7 chr7 116953691 + FOXP2 chr7 114426502 + Exonic hg38 LIHC TCGA-EP-A2KA-01A 9 26 5'UTR-5'UTR Intra-chr q31.2 Tumor suppressor gene q31.1 Transcription factor Seq+ 92825 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBFOX2-RAC2 RBFOX2 chr22 35809780 - RAC2 chr22 37226803 - Exonic hg38 LIHC TCGA-EP-A2KA-01A 6 15 5'UTR-CDS Intra-chr q13.1 Seq+ 92826 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS53-SMG6 VPS53 chr17 697418 - SMG6 chr17 2085901 - Exonic hg38 LIHC TCGA-EP-A2KA-01A 8 6 5'UTR-CDS Intra-chr Tumor suppressor gene p13.3 Seq+ 92827 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R5C-CCDC28B PPP2R5C chr14 101894560 + CCDC28B chr1 32201913 + Exonic hg38 LIHC TCGA-EP-A2KA-01A 6 7 CDS-5'UTR Inter-chr q32.31 Tumor suppressor gene p35.2 Seq+ 92828 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4C-INSL4 KDM4C chr9 6814745 + INSL4 chr9 5233654 + Exonic hg38 LIHC TCGA-EP-A2KA-01A 2 19 Out-of-frame Intra-chr p24.1 p24.1 Seq+ 92829 ChimerSeq TCGA FAWG TCGA_RNA-Seq AATF-LIG3 AATF chr17 36990857 + LIG3 chr17 34998604 + Exonic hg38 LIHC TCGA-EP-A2KA-01A 3 14 3'UTR-CDS Intra-chr q12 Tumor suppressor gene Seq+ 92830 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAZ1B-MLXIPL BAZ1B chr7 73459536 - MLXIPL chr7 73599695 - Exonic hg38 LIHC TCGA-EP-A2KA-01A 2 18 Out-of-frame Intra-chr q11.23 q11.23 Transcription factor Seq+ 92831 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXNDC15-LEAP2 TXNDC15 chr5 134874530 + LEAP2 chr5 132873950 + Exonic hg38 LIHC TCGA-EP-A2KA-01A 3 12 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 92832 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZCCHC17-CCDC28B ZCCHC17 chr1 31319166 + CCDC28B chr1 32201913 + Exonic hg38 LIHC TCGA-EP-A2KA-01A 1 19 CDS-5'UTR Intra-chr p35.2 p35.2 92833 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTPBP1-CDC42EP1 GTPBP1 chr22 38706147 + CDC42EP1 chr22 37566072 + Exonic hg38 LIHC TCGA-EP-A2KA-01A 3 9 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 92834 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTIF-C18orf25 CTIF chr18 48670744 + C18orf25 chr18 46253697 + Exonic hg38 LIHC TCGA-EP-A2KA-01A 3 7 3'UTR-CDS Intra-chr q21.1 Seq+ 92835 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF23-PIAS1 KIF23 chr15 69429213 + PIAS1 chr15 68187542 + Exonic hg38 LIHC TCGA-EP-A2KA-01A 3 7 Out-of-frame Intra-chr q23 q23 Tumor suppressor gene Seq+ 92836 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZCCHC17-PPP2R5C ZCCHC17 chr1 31319166 + PPP2R5C chr14 101894507 + Exonic hg38 LIHC TCGA-EP-A2KA-01A 3 5 In-Frame Inter-chr p35.2 q32.31 Tumor suppressor gene Seq+ 92837 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNMT3A-HADHA DNMT3A chr2 25252194 - HADHA chr2 26215175 - Exonic hg38 LIHC TCGA-EP-A2KA-01A 2 7 In-Frame Intra-chr p23.3 Oncogene Tumor suppressor gene p23.3 Seq+ 92838 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCCA-FARP1 PCCA chr13 100157340 + FARP1 chr13 98343762 + Exonic hg38 LIHC TCGA-EP-A2KA-01A 2 7 In-Frame Intra-chr q32.3 q32.2 Seq+ 92839 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPN1-ACTR1A CPN1 chr10 100063614 - ACTR1A chr10 102485733 - Exonic hg38 LIHC TCGA-EP-A2KA-01A 2 6 3'UTR-CDS Intra-chr q24.2 q24.32 Seq+ 92840 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR55-PAIP2 WDR55 chr5 140665103 + PAIP2 chr5 139363759 + Exonic hg38 LIHC TCGA-EP-A2KA-01A 2 6 CDS-5'UTR Intra-chr q31.3 q31.2 Tumor suppressor gene Seq+ 92841 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACAP2-DLG1 ACAP2 chr3 195392090 - DLG1 chr3 197051668 - Exonic hg38 LIHC TCGA-EP-A2KA-01A 2 4 Out-of-frame Intra-chr q29 q29 Tumor suppressor gene Seq+ 92842 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGMT-DOCK1 MGMT chr10 129536377 + DOCK1 chr10 127439027 + Exonic hg38 LIHC TCGA-EP-A2KA-01A 2 4 In-Frame Intra-chr q26.3 q26.2 Seq+ 92843 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-MYEOV PPFIA1 chr11 70272436 + MYEOV chr11 69341510 + Exonic hg38 LIHC TCGA-EP-A2KA-01A 1 8 CDS-3'UTR Intra-chr q13.3 q13.3 92844 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCCA-CLYBL PCCA chr13 100112061 + CLYBL chr13 99772824 + Exonic hg38 LIHC TCGA-EP-A2KA-01A 2 3 Out-of-frame Intra-chr q32.3 q32.3 Seq+ 92845 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMK1D-PROSER2 CAMK1D chr10 12349910 + PROSER2 chr10 11851997 + Exonic hg38 LIHC TCGA-EP-A2KA-01A 2 1 CDS-5'UTR Intra-chr p13 p14 Seq+ 92846 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST3GAL4-HYLS1 ST3GAL4 chr11 126356302 + HYLS1 chr11 125899104 + Exonic hg38 LIHC TCGA-EP-A2KA-01A 1 4 5'UTR-5'UTR Intra-chr q24.2 q24.2 Seq+ 92847 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTF1-PABPC4 MTF1 chr1 37857251 - PABPC4 chr1 39572586 - Exonic hg38 LIHC TCGA-EP-A2KA-01A 1 3 Out-of-frame Intra-chr p34.3 Transcription factor p34.3 92848 ChimerSeq TCGA FAWG TCGA_RNA-Seq YIPF1-USP24 YIPF1 chr1 53866200 - USP24 chr1 55097717 - Exonic hg38 LIHC TCGA-EP-A2KA-01A 1 2 In-Frame Intra-chr p32.3 p32.3 Seq+ 92849 ChimerSeq TCGA FAWG TCGA_RNA-Seq C3-HP C3 chr19 6694431 - HP chr16 72059117 + Exonic hg38 LIHC TCGA-EP-A2KC-01A 1 23 In-Frame Inter-chr p13.3 q22.2 Tumor suppressor gene 92850 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERPINA1-FGG SERPINA1 chr14 94380871 - FGG chr4 154605066 - Exonic hg38 LIHC TCGA-FV-A23B-01A 1 30 5'UTR-CDS Inter-chr q32.13 q32.1 92851 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS4B-BCL2 VPS4B chr18 63399242 - BCL2 chr18 63128759 - Exonic hg38 LIHC TCGA-FV-A23B-01A 1 9 Out-of-frame Intra-chr q21.33 q21.33 Oncogene 92852 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAG9-UBBP4 SPAG9 chr17 51079584 - UBBP4 chr17 22204087 + Exonic hg38 LIHC TCGA-FV-A2QR-01A 10 36 CDS-5'UTR Intra-chr q21.33 p11.2 92853 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTNA-AQP4 DTNA chr18 34493514 + AQP4 chr18 26862596 - Exonic hg38 LIHC TCGA-FV-A3I0-01A 7 14 5'UTR-5'UTR Intra-chr q12.1 q11.2 Seq+ 92854 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1A-THSD7B ARID1A chr1 26732792 + THSD7B chr2 136882144 + Exonic hg38 LIHC TCGA-FV-A3I0-01A 1 8 CDS-5'UTR Inter-chr p36.11 Oncogene Tumor suppressor gene q22.1 Seq+ 92855 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUSC3-KCTD1 TUSC3 chr8 15417305 + KCTD1 chr18 26459925 - Exonic hg38 LIHC TCGA-FV-A3I1-01A 1 5 5'UTR-CDS Inter-chr p22 q11.2 92856 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGPS-ZNF385B AGPS chr2 177505575 + ZNF385B chr2 179544969 - Exonic hg38 LIHC TCGA-FV-A3I1-01A 1 4 Out-of-frame Intra-chr q31.2 q31.3 Transcription factor Seq+ 92857 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYF2-RHD SYF2 chr1 25232104 - RHD chr1 25284573 + Exonic hg38 LIHC TCGA-FV-A3R3-01A 2 11 Out-of-frame Intra-chr p36.11 p36.11 Seq+ 92858 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMKK2-HPD CAMKK2 chr12 121296638 - HPD chr12 121840048 - Exonic hg38 LIHC TCGA-FV-A495-01A 6 39 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 92859 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMA3-STRADA PSMA3 chr14 58257998 + STRADA chr17 63704047 - Exonic hg38 LIHC TCGA-FV-A495-01A 1 46 In-Frame Inter-chr q23.1 q23.3 Tumor suppressor gene Seq+ 92860 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHH-KNG1 SHH chr7 155803034 - KNG1 chr3 186741522 + Exonic hg38 LIHC TCGA-FV-A495-01A 4 23 Out-of-frame Inter-chr q36.3 q27.3 Seq+ 92861 ChimerSeq TCGA FAWG TCGA_RNA-Seq C16orf45-SMPDL3B C16orf45 chr16 15434759 + SMPDL3B chr1 27958476 + Exonic hg38 LIHC TCGA-FV-A495-01A 3 12 Out-of-frame Inter-chr p35.3 Seq+ 92862 ChimerSeq TCGA FAWG TCGA_RNA-Seq MASP2-EXOSC10 MASP2 chr1 11030176 - EXOSC10 chr1 11077651 - Exonic hg38 LIHC TCGA-FV-A495-01A 3 4 Out-of-frame Intra-chr p36.22 p36.22 Seq+ 92863 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP9X-ATP6AP2 USP9X chrX 41171958 + ATP6AP2 chrX 40605561 + Exonic hg38 LIHC TCGA-FV-A496-01A 8 66 Out-of-frame Intra-chr p11.4 Oncogene p11.4 Seq+ 92864 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPLOC4-ALYREF NPLOC4 chr17 81600341 - ALYREF chr17 81890820 - Exonic hg38 LIHC TCGA-FV-A496-01A 3 48 In-Frame Intra-chr q25.3 q25.3 Seq+ 92865 ChimerSeq TCGA FAWG TCGA_RNA-Seq C4BPA-MAPKAPK2 C4BPA chr1 207134592 + MAPKAPK2 chr1 206728710 + Exonic hg38 LIHC TCGA-FV-A496-01A 5 15 Out-of-frame Intra-chr q32.2 q32.1 CAMK:MAPKAPK Seq+ 92866 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHMP4B-CBFA2T2 CHMP4B chr20 33811658 + CBFA2T2 chr20 33636640 + Exonic hg38 LIHC TCGA-FV-A496-01A 7 7 In-Frame Intra-chr q11.22 q11.21 Seq+ 92867 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAST3-MAP1S MAST3 chr19 18110741 + MAP1S chr19 17720936 + Exonic hg38 LIHC TCGA-FV-A496-01A 2 15 Out-of-frame Intra-chr p13.11 AGC:MAST p13.11 92868 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYLK-PLXND1 MYLK chr3 123626818 - PLXND1 chr3 129578433 - Exonic hg38 LIHC TCGA-FV-A496-01A 2 13 In-Frame Intra-chr q21.1 q22.1 Seq+ 92869 ChimerSeq TCGA FAWG TCGA_RNA-Seq PFDN4-TSHZ2 PFDN4 chr20 54214458 + TSHZ2 chr20 53487144 + Exonic hg38 LIHC TCGA-FV-A496-01A 2 8 CDS-3'UTR Intra-chr q13.2 q13.2 Transcription factor Seq+ 92870 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNN3-PBXIP1 KCNN3 chr1 154733003 - PBXIP1 chr1 154951921 - Exonic hg38 LIHC TCGA-FV-A496-01A 1 6 In-Frame Intra-chr q21.3 q21.3 92871 ChimerSeq TCGA FAWG TCGA_RNA-Seq OGT-NONO OGT chrX 71554592 + NONO chrX 71296565 + Exonic hg38 LIHC TCGA-FV-A496-01A 1 2 In-Frame Intra-chr q13.1 q13.1 92872 ChimerSeq TCGA FAWG TCGA_RNA-Seq C22orf39-GNB1L C22orf39 chr22 19447378 - GNB1L chr22 19802216 - Exonic hg38 LIHC TCGA-FV-A4ZP-01A 4 1 In-Frame Intra-chr q11.21 q11.21 Seq+ 92873 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGHG1-RBP4 IGHG1 chr14 105742065 - RBP4 chr10 93600971 - Exonic hg38 LIHC TCGA-FV-A4ZQ-01A 1 10 Out-of-frame Inter-chr q32.33 q23.33 92874 ChimerSeq TCGA FAWG TCGA_RNA-Seq BBX-ALCAM BBX chr3 107778519 + ALCAM chr3 105520067 + Exonic hg38 LIHC TCGA-FV-A4ZQ-01A 1 3 In-Frame Intra-chr q13.12 Transcription factor q13.11 Seq+ 92875 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGK2-SERINC2 SGK2 chr20 43559159 + SERINC2 chr1 31432967 + Exonic hg38 LIHC TCGA-G3-A25S-01A 1 2 5'UTR-CDS Inter-chr q13.12 AGC:SGK p35.2 92876 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPB2-ZC3H13 CPB2 chr13 46073873 - ZC3H13 chr13 45968028 - Exonic hg38 LIHC TCGA-G3-A25U-01A 98 336 Out-of-frame Intra-chr q14.13 q14.13 92877 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPR1-NME7 XPR1 chr1 180632270 + NME7 chr1 169169554 - Exonic hg38 LIHC TCGA-G3-A25U-01A 53 249 In-Frame Intra-chr q25.3 q24.2 Seq+ 92878 ChimerSeq TCGA FAWG TCGA_RNA-Seq POFUT1-HCK POFUT1 chr20 32231061 + HCK chr20 32101317 + Exonic hg38 LIHC TCGA-G3-A25X-01A 28 87 Out-of-frame Intra-chr q11.21 q11.21 TK:Src Seq+ 92879 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF13B-SMTN KIF13B chr8 29071620 - SMTN chr22 31087965 + Exonic hg38 LIHC TCGA-G3-A25Y-01A 4 20 Out-of-frame Inter-chr p12 q12.2 Seq+ 92880 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIC-HMG20B NFIC chr19 3452666 + HMG20B chr19 3573292 + Exonic hg38 LIHC TCGA-G3-A3CG-01A 8 4 CDS-5'UTR Intra-chr p13.3 Transcription factor p13.3 Transcription factor 92881 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRCH3-TMEM41A LRCH3 chr3 197871462 + TMEM41A chr3 185483400 - Exonic hg38 LIHC TCGA-G3-A3CG-01A 1 10 CDS-3'UTR Intra-chr q29 q27.2 92882 ChimerSeq TCGA FAWG TCGA_RNA-Seq A2M-CLEC2A A2M chr12 9068183 - CLEC2A chr12 9898976 - Exonic hg38 LIHC TCGA-G3-A3CG-01A 1 7 Out-of-frame Intra-chr p13.31 p13.31 92883 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX60L-CPE DDX60L chr4 168472455 - CPE chr4 165484422 + Exonic hg38 LIHC TCGA-G3-A3CH-01A 1 5 Out-of-frame Intra-chr q32.3 q32.3 Seq+ 92884 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFPQ-TFEB SFPQ chr1 35189003 - TFEB chr6 41691235 - Exonic hg38 LIHC TCGA-G3-A3CI-01A 12 35 In-Frame Inter-chr p34.3 p21.1 Transcription factor Seq+ 92885 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGB-HP FGB chr4 154568494 + HP chr16 72059117 + Exonic hg38 LIHC TCGA-G3-A3CI-01A 1 18 In-Frame Inter-chr q31.3 q22.2 Tumor suppressor gene 92886 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMBP-RBP4 AMBP chr9 114061424 - RBP4 chr10 93594035 - Exonic hg38 LIHC TCGA-G3-A3CI-01A 1 8 In-Frame Inter-chr q32 q23.33 92887 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP295-DEUP1 CEP295 chr11 93661774 + DEUP1 chr11 93371038 + Exonic hg38 LIHC TCGA-G3-A5SL-01A 1 9 5'UTR-CDS Intra-chr q21 q21 92888 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLU-RBP4 CLU chr8 27598460 - RBP4 chr10 93594035 - Exonic hg38 LIHC TCGA-G3-A5SM-01A 1 10 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q23.33 92889 ChimerSeq TCGA FAWG TCGA_RNA-Seq C16orf62-C9 C16orf62 chr16 19601723 + C9 chr5 39285233 - Exonic hg38 LIHC TCGA-G3-A5SM-01A 1 1 Out-of-frame Inter-chr p12.3 p13.1 92890 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKAL1-CRHR2 CDKAL1 chr6 21108463 + CRHR2 chr7 30656012 - Exonic hg38 LIHC TCGA-G3-A7M5-01A 1 8 In-Frame Inter-chr p22.3 p14.3 Seq+ 92891 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDI2-C4BPB DDI2 chr1 15617808 + C4BPB chr1 207089482 + Exonic hg38 LIHC TCGA-G3-A7M7-01A 38 101 CDS-5'UTR Intra-chr p36.21 q32.1 Seq+ 92892 ChimerSeq TCGA FAWG TCGA_RNA-Seq GDA-FAM69B GDA chr9 72149682 + FAM69B chr9 136717577 + Exonic hg38 LIHC TCGA-G3-A7M7-01A 16 53 Out-of-frame Intra-chr q21.13 q34.3 Seq+ 92893 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPP-AK1 LPP chr3 188154021 + AK1 chr9 127874649 - Exonic hg38 LIHC TCGA-G3-A7M7-01A 10 59 5'UTR-5'UTR Inter-chr q27.3 Oncogene q34.11 Seq+ 92894 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREB3L3-PKN3 CREB3L3 chr19 4171175 + PKN3 chr9 128705303 + Exonic hg38 LIHC TCGA-G3-A7M7-01A 10 25 In-Frame Inter-chr p13.3 Transcription factor q34.11 AGC:PKN Seq+ 92895 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAT3-TPM3 STAT3 chr17 42345559 - TPM3 chr1 154176248 - Exonic hg38 LIHC TCGA-G3-A7M7-01A 8 25 In-Frame Inter-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q21.3 Seq+ 92896 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHKB-CDK11B CHKB chr22 50580198 - CDK11B chr1 1635662 - Exonic hg38 LIHC TCGA-G3-A7M7-01A 5 2 Out-of-frame Inter-chr q13.33 p36.33 92897 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAT3-C1orf43 STAT3 chr17 42345559 - C1orf43 chr1 154207648 - Exonic hg38 LIHC TCGA-G3-A7M7-01A 2 3 In-Frame Inter-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q21.3 Seq+ 92898 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGAPA2-PCK1 RALGAPA2 chr20 20712375 - PCK1 chr20 57561372 + Exonic hg38 LIHC TCGA-G3-A7M7-01A 1 4 CDS-5'UTR Intra-chr p11.23 q13.31 92899 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2K2-ZDHHC12 MAP2K2 chr19 4097279 - ZDHHC12 chr9 128722574 - Exonic hg38 LIHC TCGA-G3-A7M7-01A 1 3 Out-of-frame Inter-chr p13.3 STE:STE7 Oncogene q34.11 92900 ChimerSeq TCGA FAWG TCGA_RNA-Seq AR-NR4A3 AR chrX 67643407 + NR4A3 chr9 99825659 + Exonic hg38 LIHC TCGA-G3-A7M8-01A 1 8 CDS-5'UTR Inter-chr q12 Oncogene Tumor suppressor gene Transcription factor q31.1 Tumor suppressor gene Transcription factor Seq+ 92901 ChimerSeq TCGA FAWG TCGA_RNA-Seq RELN-SLC25A26 RELN chr7 103489742 - SLC25A26 chr3 66369478 + Exonic hg38 LIHC TCGA-G3-A7M9-01A 1 8 CDS-3'UTR Inter-chr q22.1 Seq+ 92902 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBAC2-ASNS UBAC2 chr13 99244624 + ASNS chr7 97869179 - Exonic hg38 LIHC TCGA-G3-A7M9-01A 1 8 5'UTR-5'UTR Inter-chr q32.3 q21.3 Seq+ 92903 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1S-NXPH4 C1S chr12 7060877 + NXPH4 chr12 57224878 + Exonic hg38 LIHC TCGA-G3-AAUZ-01A 24 40 5'UTR-CDS Intra-chr p13.31 q13.3 Seq+ 92904 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-PHF12 TMPRSS2 chr21 41488394 - PHF12 chr17 28908881 - Exonic hg38 LIHC TCGA-G3-AAUZ-01A 2 5 In-Frame Inter-chr q22.3 q11.2 Seq+ 92905 ChimerSeq TCGA FAWG TCGA_RNA-Seq METAP2-VEZT METAP2 chr12 95496098 + VEZT chr12 95296051 + Exonic hg38 LIHC TCGA-G3-AAUZ-01A 1 6 In-Frame Intra-chr q22 q22 Tumor suppressor gene Seq+ 92906 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEF2K-VWA3A EEF2K chr16 22225975 + VWA3A chr16 22146236 + Exonic hg38 LIHC TCGA-G3-AAV1-01A 3 16 5'UTR-5'UTR Intra-chr p12.2 Seq+ 92907 ChimerSeq TCGA FAWG TCGA_RNA-Seq UGT1A6-JPH3 UGT1A6 chr2 233693865 + JPH3 chr16 87689646 + Exonic hg38 LIHC TCGA-G3-AAV3-01A 2 6 Out-of-frame Inter-chr q37.1 q24.2 Seq+ 92908 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNPAT-TRIM67 GNPAT chr1 231241456 + TRIM67 chr1 231200148 + Exonic hg38 LIHC TCGA-G3-AAV7-01A 5 12 In-Frame Intra-chr q42.2 q42.2 Seq+ 92909 ChimerSeq TCGA FAWG TCGA_RNA-Seq YEATS4-CPSF6 YEATS4 chr12 69370975 + CPSF6 chr12 69269512 + Exonic hg38 LIHC TCGA-G3-AAV7-01A 1000 1000 CDS-3'UTR Intra-chr q15 q15 Seq+ 92910 ChimerSeq TCGA FAWG TCGA_RNA-Seq FDFT1-CLVS1 FDFT1 chr8 11809850 + CLVS1 chr8 61299677 + Exonic hg38 LIHC TCGA-GJ-A3OU-01A 2 5 5'UTR-5'UTR Intra-chr p23.1 q12.2 Seq+ 92911 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCXR-SIRT7 DCXR chr17 82036721 - SIRT7 chr17 81915681 - Exonic hg38 LIHC TCGA-GJ-A6C0-01A 5 33 In-Frame Intra-chr q25.3 q25.3 92912 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP8-CLPTM1L USP8 chr15 50499098 + CLPTM1L chr5 1325816 - Exonic hg38 LIHC TCGA-GJ-A6C0-01A 4 37 3'UTR-3'UTR Inter-chr q21.2 p15.33 Seq+ 92913 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNIH4-VPS39 CNIH4 chr1 224365991 + VPS39 chr15 42166913 - Exonic hg38 LIHC TCGA-GJ-A6C0-01A 5 16 Out-of-frame Inter-chr q42.11 q15.1 Seq+ 92914 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIPC-CCNA2 LIPC chr15 58410818 + CCNA2 chr4 121821091 - Exonic hg38 LIHC TCGA-GJ-A6C0-01A 4 18 5'UTR-CDS Inter-chr q21.3 q27 Seq+ 92915 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETDB1-GABPB2 SETDB1 chr1 150930118 + GABPB2 chr1 151117392 + Exonic hg38 LIHC TCGA-GJ-A6C0-01A 1 29 In-Frame Intra-chr q21.3 Transcription factor q21.3 92916 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB11FIP4-NF1 RAB11FIP4 chr17 31488272 + NF1 chr17 31374013 + Exonic hg38 LIHC TCGA-GJ-A6C0-01A 7 3 Out-of-frame Intra-chr q11.2 q11.2 Oncogene Tumor suppressor gene 92917 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMIM14-RFC1 SMIM14 chr4 39638739 - RFC1 chr4 39312931 - Exonic hg38 LIHC TCGA-GJ-A6C0-01A 3 16 5'UTR-CDS Intra-chr p14 p14 Seq+ 92918 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCYT2-RAC3 PCYT2 chr17 81902179 - RAC3 chr17 82032771 + Exonic hg38 LIHC TCGA-GJ-A6C0-01A 3 15 Out-of-frame Intra-chr q25.3 q25.3 92919 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL17RC-TTLL3 IL17RC chr3 9932703 + TTLL3 chr3 9818822 + Exonic hg38 LIHC TCGA-GJ-A6C0-01A 1 7 In-Frame Intra-chr p25.3 p25.3 Seq+ 92920 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRAT-VTI1A LRAT chr4 154636396 + VTI1A chr10 112815290 + Exonic hg38 LIHC TCGA-GJ-A6C0-01A 1 4 5'UTR-CDS Inter-chr q32.1 q25.2 Seq+ 92921 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEBPG-GPATCH1 CEBPG chr19 33373895 + GPATCH1 chr19 33113767 + Exonic hg38 LIHC TCGA-GJ-A6C0-01A 1 1 5'UTR-5'UTR Intra-chr q13.11 Transcription factor q13.11 Seq+ 92922 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSPC1-METTL21C PSPC1 chr13 19782386 - METTL21C chr13 102687057 - Exonic hg38 LIHC TCGA-GJ-A9DB-01A 17 65 In-Frame Intra-chr q12.11 q33.1 Seq+ 92923 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R5E-MBIP PPP2R5E chr14 63539529 - MBIP chr14 36314915 - Exonic hg38 LIHC TCGA-GJ-A9DB-01A 2 2 Out-of-frame Intra-chr q23.2 q13.3 Seq+ 92924 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSC1-SARDH TSC1 chr9 132921363 - SARDH chr9 133713124 - Exonic hg38 LIHC TCGA-GJ-A9DB-01A 1 5 Out-of-frame Intra-chr q34.13 Oncogene Tumor suppressor gene q34.2 Seq+ 92925 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLRG1-FGG PLRG1 chr4 154544445 - FGG chr4 154606982 - Exonic hg38 LIHC TCGA-HP-A5MZ-01A 1 1 Out-of-frame Intra-chr q31.3 q32.1 92926 ChimerSeq TCGA FAWG TCGA_RNA-Seq POP1-TATDN1 POP1 chr8 98134659 + TATDN1 chr8 124488696 - Exonic hg38 LIHC TCGA-HP-A5N0-01A 3 34 Out-of-frame Intra-chr q22.2 q24.13 Seq+ 92927 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF438-RFTN1 ZNF438 chr10 30984369 - RFTN1 chr3 16434037 - Exonic hg38 LIHC TCGA-HP-A5N0-01A 1 7 5'UTR-CDS Inter-chr p11.23 Transcription factor p24.3 Seq+ 92928 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARNTL2-PPFIBP1 ARNTL2 chr12 27368412 + PPFIBP1 chr12 27578152 + Exonic hg38 LIHC TCGA-K7-AAU7-01A 21 38 CDS-5'UTR Intra-chr p11.23 Transcription factor p11.23 Seq+ 92929 ChimerSeq TCGA FAWG TCGA_RNA-Seq MECP2-F8 MECP2 chrX 154092184 - F8 chrX 154957171 - Exonic hg38 LIHC TCGA-K7-AAU7-01A 1 6 Out-of-frame Intra-chr q28 Transcription factor q28 Seq+ 92930 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-PPP1R1B ERBB2 chr17 39727547 + PPP1R1B chr17 39635607 + Exonic hg38 LIHC TCGA-KR-A7K2-01A 8 21 In-Frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 92931 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4B-DKKL1 KDM4B chr19 5047669 + DKKL1 chr19 49374717 + Exonic hg38 LIHC TCGA-KR-A7K8-01A 46 110 Out-of-frame Intra-chr p13.3 q13.33 Seq+ 92932 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD9A-MUS81 RAD9A chr11 67393787 + MUS81 chr11 65865254 + Exonic hg38 LIHC TCGA-KR-A7K8-01A 10 77 Out-of-frame Intra-chr q13.2 q13.1 Tumor suppressor gene Seq+ 92933 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC27-SNF8 CDC27 chr17 47189146 - SNF8 chr17 48941062 - Exonic hg38 LIHC TCGA-KR-A7K8-01A 5 71 In-Frame Intra-chr q21.32 q21.32 Seq+ 92934 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM2-ANGPTL4 DNM2 chr19 10718403 + ANGPTL4 chr19 8373705 + Exonic hg38 LIHC TCGA-KR-A7K8-01A 7 49 Out-of-frame Intra-chr p13.2 p13.2 Tumor suppressor gene Seq+ 92935 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASPH-EIF4EBP1 ASPH chr8 61517528 - EIF4EBP1 chr8 38057081 + Exonic hg38 LIHC TCGA-KR-A7K8-01A 7 13 Out-of-frame Intra-chr q12.3 p11.23 Seq+ 92936 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX17-ENTHD1 DDX17 chr22 38493710 - ENTHD1 chr22 39765609 - Exonic hg38 LIHC TCGA-KR-A7K8-01A 3 25 In-Frame Intra-chr q13.1 q13.1 Seq+ 92937 ChimerSeq TCGA FAWG TCGA_RNA-Seq DUSP10-SUSD4 DUSP10 chr1 221738934 - SUSD4 chr1 223268675 - Exonic hg38 LIHC TCGA-KR-A7K8-01A 4 13 In-Frame Intra-chr q41 q41 Seq+ 92938 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFB2M-ZNF124 TFB2M chr1 246548545 - ZNF124 chr1 247123871 - Exonic hg38 LIHC TCGA-KR-A7K8-01A 6 3 Out-of-frame Intra-chr q44 q44 Transcription factor Seq+ 92939 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCL2-TSEN2 PLCL2 chr3 16885366 + TSEN2 chr3 12519059 + Exonic hg38 LIHC TCGA-KR-A7K8-01A 2 17 3'UTR-CDS Intra-chr p25.2 Seq+ 92940 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB17-HDAC4 RAB17 chr2 237585998 - HDAC4 chr2 239054833 - Exonic hg38 LIHC TCGA-KR-A7K8-01A 4 8 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 92941 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3AP1-AVPI1 PIK3AP1 chr10 96648659 - AVPI1 chr10 97678025 - Exonic hg38 LIHC TCGA-KR-A7K8-01A 4 7 Out-of-frame Intra-chr q24.1 q24.2 Seq+ 92942 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB6A-GDPD5 RAB6A chr11 73760566 - GDPD5 chr11 75490320 - Exonic hg38 LIHC TCGA-KR-A7K8-01A 2 8 CDS-5'UTR Intra-chr q13.4 q13.5 Seq+ 92943 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTIF-KATNAL2 CTIF chr18 48670744 + KATNAL2 chr18 47046457 + Exonic hg38 LIHC TCGA-KR-A7K8-01A 1 9 3'UTR-CDS Intra-chr q21.1 Seq+ 92944 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD109-IT1 CD109 chr6 73803301 + IT1 chr6 72677095 + Exonic hg38 LIHC TCGA-KR-A7K8-01A 1 7 Out-of-frame Intra-chr q13 92945 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGD4-VPS13D FGD4 chr12 32582467 + VPS13D chr1 12455998 + Exonic hg38 LIHC TCGA-KR-A7K8-01A 1 7 In-Frame Inter-chr p11.21 p36.22 Seq+ 92946 ChimerSeq TCGA FAWG TCGA_RNA-Seq S100A13-GBA S100A13 chr1 153626320 - GBA chr1 155241180 - Exonic hg38 LIHC TCGA-KR-A7K8-01A 1 5 CDS-5'UTR Intra-chr q21.3 Seq+ 92947 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM9SF3-AVPI1 TM9SF3 chr10 96559659 - AVPI1 chr10 97678025 - Exonic hg38 LIHC TCGA-KR-A7K8-01A 1 3 Out-of-frame Intra-chr q24.1 q24.2 Seq+ 92948 ChimerSeq TCGA FAWG TCGA_RNA-Seq RORC-S100A7 RORC chr1 151829429 - S100A7 chr1 153459030 - Exonic hg38 LIHC TCGA-KR-A7K8-01A 1 1 CDS-5'UTR Intra-chr q21.3 Transcription factor q21.3 92949 ChimerSeq TCGA FAWG TCGA_RNA-Seq TF-HP TF chr3 133754671 + HP chr16 72059114 + Exonic hg38 LIHC TCGA-LG-A6GG-01A 1 45 In-Frame Inter-chr q22.1 q22.2 Tumor suppressor gene 92950 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBFOX2-EEF2KMT RBFOX2 chr22 36028240 - EEF2KMT chr16 5085732 - Exonic hg38 LIHC TCGA-LG-A9QC-01A 10 31 5'UTR-CDS Inter-chr p13.3 92951 ChimerSeq TCGA FAWG TCGA_RNA-Seq DUS1L-CCDC57 DUS1L chr17 82065613 - CCDC57 chr17 82134194 - Exonic hg38 LIHC TCGA-LG-A9QC-01A 3 4 5'UTR-CDS Intra-chr q25.3 q25.3 Seq+ 92952 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPL-APOL3 PPL chr16 4888978 - APOL3 chr22 36142058 - Exonic hg38 LIHC TCGA-LG-A9QC-01A 2 6 Out-of-frame Inter-chr p13.3 q12.3 Seq+ 92953 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCA-EFNA3 PRKCA chr17 66306127 + EFNA3 chr1 155085091 + Exonic hg38 LIHC TCGA-LG-A9QC-01A 2 5 Out-of-frame Inter-chr q24.2 q21.3 Seq+ 92954 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC8B1-IQCD SLC8B1 chr12 113332723 - IQCD chr12 113200813 - Exonic hg38 LIHC TCGA-MI-A75G-01A 7 31 In-Frame Intra-chr q24.13 q24.13 92955 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFPQ-TFEB SFPQ chr1 35189003 - TFEB chr6 41691235 - Exonic hg38 LIHC TCGA-MR-A520-01A 8 51 In-Frame Inter-chr p34.3 p21.1 Transcription factor Seq+ 92956 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGB-FGA FGB chr4 154563132 + FGA chr4 154589562 - Exonic hg38 LIHC TCGA-MR-A520-01A 1 23 In-Frame Intra-chr q31.3 q31.3 92957 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFEB-AS2 TFEB chr6 41735350 - AS2 chr3 64799465 + Exonic hg38 LIHC TCGA-MR-A520-01A 2 10 Out-of-frame Inter-chr p21.1 Transcription factor 92958 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAAT-ALDOB BAAT chr9 101383470 - ALDOB chr9 101430897 - Exonic hg38 LIHC TCGA-MR-A520-01A 1 7 5'UTR-5'UTR Intra-chr q31.1 q31.1 92959 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41-USP49 EPB41 chr1 28893837 + USP49 chr6 41807011 - Exonic hg38 LIHC TCGA-MR-A520-01A 1 3 5'UTR-5'UTR Inter-chr p35.3 Tumor suppressor gene p21.1 Seq+ 92960 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJB1-PRKACA DNAJB1 chr19 14518139 - PRKACA chr19 14107409 - Exonic hg38 LIHC TCGA-MR-A8JO-01A 23 169 In-Frame Intra-chr p13.12 Tumor suppressor gene p13.12 KB Pub Seq+ 92961 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRC1-ALOX5 MRC1 chr10 17894312 + ALOX5 chr10 45382483 + Exonic hg38 LIHC TCGA-MR-A8JO-01A 27 72 CDS-3'UTR Intra-chr p12.33 Seq+ 92962 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOP3A-ANAPC16 TOP3A chr17 18282698 - ANAPC16 chr10 72230366 + Exonic hg38 LIHC TCGA-MR-A8JO-01A 4 7 5'UTR-5'UTR Inter-chr q22.1 Seq+ 92963 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPS1-MAP2 CPS1 chr2 210590234 + MAP2 chr2 209723595 + Exonic hg38 LIHC TCGA-MR-A8JO-01A 2 10 In-Frame Intra-chr q34 q34 Seq+ 92964 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC61A1-EEFSEC SEC61A1 chr3 128070706 + EEFSEC chr3 128246836 + Exonic hg38 LIHC TCGA-MR-A8JO-01A 1000 1000 3'UTR-3'UTR Intra-chr q21.3 q21.3 92965 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL13RA1-DOCK11 IL13RA1 chrX 118766976 + DOCK11 chrX 118662686 + Exonic hg38 LIHC TCGA-NI-A4U2-01A 13 54 In-Frame Intra-chr q24 q24 Seq+ 92966 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXW11-NUP210L FBXW11 chr5 171996890 - NUP210L chr1 154027597 - Exonic hg38 LIHC TCGA-NI-A4U2-01A 2 37 Out-of-frame Inter-chr q35.1 q21.3 Seq+ 92967 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC4A2-AOC1 SLC4A2 chr7 151075508 + AOC1 chr7 150856455 + Exonic hg38 LIHC TCGA-NI-A4U2-01A 1 28 CDS-5'UTR Intra-chr q36.1 q36.1 92968 ChimerSeq TCGA FAWG TCGA_RNA-Seq STRN-SULT6B1 STRN chr2 36899523 - SULT6B1 chr2 37188547 - Exonic hg38 LIHC TCGA-NI-A4U2-01A 3 6 CDS-5'UTR Intra-chr p22.2 p22.2 Seq+ 92969 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC61-DOCK4 LRRC61 chr7 150326010 + DOCK4 chr7 111989163 - Exonic hg38 LIHC TCGA-NI-A8LF-01A 3 2 5'UTR-CDS Intra-chr q36.1 q31.1 Seq+ 92970 ChimerSeq TCGA FAWG TCGA_RNA-Seq LCOR-RBM20 LCOR chr10 96833479 + RBM20 chr10 110780801 + Exonic hg38 LIHC TCGA-NI-A8LF-01A 1 6 5'UTR-CDS Intra-chr q24.1 Transcription factor q25.2 Seq+ 92971 ChimerSeq TCGA FAWG TCGA_RNA-Seq LYSMD2-MYO5A LYSMD2 chr15 51737350 - MYO5A chr15 52321509 - Exonic hg38 LIHC TCGA-NI-A8LF-01A 1 4 In-Frame Intra-chr q21.2 q21.2 Seq+ 92972 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIT1-ADH1C TRIT1 chr1 39883318 - ADH1C chr4 99347144 - Exonic hg38 LIHC TCGA-PD-A5DF-01A 17 111 In-Frame Inter-chr p34.2 Tumor suppressor gene q23 Seq+ 92973 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLIC4-ARFGAP3 CLIC4 chr1 24745625 + ARFGAP3 chr22 42847632 - Exonic hg38 LIHC TCGA-PD-A5DF-01A 14 40 In-Frame Inter-chr p36.11 q13.2 Seq+ 92974 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCCA-ZIC2 PCCA chr13 100102960 + ZIC2 chr13 99984946 + Exonic hg38 LIHC TCGA-PD-A5DF-01A 7 35 Out-of-frame Intra-chr q32.3 q32.3 Transcription factor Seq+ 92975 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1109-CCNA2 KIAA1109 chr4 122154112 + CCNA2 chr4 121821091 - Exonic hg38 LIHC TCGA-PD-A5DF-01A 5 25 5'UTR-CDS Intra-chr q27 q27 Seq+ 92976 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIT1-ADH1B TRIT1 chr1 39883318 - ADH1B chr4 99318886 - Exonic hg38 LIHC TCGA-PD-A5DF-01A 10 2 In-Frame Inter-chr p34.2 Tumor suppressor gene q23 92977 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLIC4-PACSIN2 CLIC4 chr1 24745625 + PACSIN2 chr22 42847632 - Exonic hg38 LIHC TCGA-PD-A5DF-01A 7 11 CDS-3'UTR Inter-chr p36.11 q13.2 Seq+ 92978 ChimerSeq TCGA FAWG TCGA_RNA-Seq C16orf70-GNAO1 C16orf70 chr16 67126042 + GNAO1 chr16 56328631 + Exonic hg38 LIHC TCGA-PD-A5DF-01A 3 18 In-Frame Intra-chr q22.1 q13 Seq+ 92979 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL2L2-RNF212B BCL2L2 chr14 23308199 + RNF212B chr14 23270600 + Exonic hg38 LIHC TCGA-PD-A5DF-01A 3 14 Out-of-frame Intra-chr q11.2 Oncogene q11.2 92980 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAI14-SCP2 RAI14 chr5 34656475 + SCP2 chr1 52974769 + Exonic hg38 LIHC TCGA-PD-A5DF-01A 2 16 5'UTR-CDS Inter-chr p13.2 p32.3 Seq+ 92981 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCCA-CLYBL PCCA chr13 100235878 + CLYBL chr13 99858861 + Exonic hg38 LIHC TCGA-PD-A5DF-01A 1 11 Out-of-frame Intra-chr q32.3 q32.3 Seq+ 92982 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF512B-SEPT1 ZNF512B chr20 63961309 - SEPT1 chr16 30383014 - Exonic hg38 LIHC TCGA-PD-A5DF-01A 1 4 Out-of-frame Inter-chr q13.33 Transcription factor p11.2 92983 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENTPD6-TBC1D10B ENTPD6 chr20 25218614 + TBC1D10B chr16 30365594 - Exonic hg38 LIHC TCGA-PD-A5DF-01A 1 3 Out-of-frame Inter-chr p11.21 p11.2 92984 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF341-C20orf144 ZNF341 chr20 33767041 + C20orf144 chr20 33664828 + Exonic hg38 LIHC TCGA-PD-A5DF-01A 1000 1000 CDS-3'UTR Intra-chr q11.22 Transcription factor q11.22 Seq+ 92985 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTSS1-WASHC5 MTSS1 chr8 124585087 - WASHC5 chr8 125028707 - Exonic hg38 LIHC TCGA-QA-A7B7-01A 79 628 Out-of-frame Intra-chr q24.13 Tumor suppressor gene q24.13 92986 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXO1-MRPS31 FOXO1 chr13 40665583 - MRPS31 chr13 40729601 - Exonic hg38 LIHC TCGA-QA-A7B7-01A 13 50 Out-of-frame Intra-chr q14.11 Oncogene Tumor suppressor gene Transcription factor q14.11 Seq+ 92987 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCRS1-C1QL4 MCRS1 chr12 49563001 - C1QL4 chr12 49333233 - Exonic hg38 LIHC TCGA-QA-A7B7-01A 7 21 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 92988 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJB1-PRKACA DNAJB1 chr19 14518139 - PRKACA chr19 14107409 - Exonic hg38 LIHC TCGA-RC-A6M3-01A 74 343 In-Frame Intra-chr p13.12 Tumor suppressor gene p13.12 KB Pub Seq+ 92989 ChimerSeq TCGA FAWG TCGA_RNA-Seq TGFBR1-COL15A1 TGFBR1 chr9 99147784 + COL15A1 chr9 99015417 + Exonic hg38 LIHC TCGA-RC-A6M3-01A 7 35 In-Frame Intra-chr q22.33 q22.33 Seq+ 92990 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSCR3-CTSH DSCR3 chr21 37267238 - CTSH chr15 78939171 - Exonic hg38 LIHC TCGA-RC-A6M3-01A 5 11 Out-of-frame Inter-chr q22.13 q25.1 Seq+ 92991 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPCDC-LMAN1L PPCDC chr15 75023626 + LMAN1L chr15 74812950 + Exonic hg38 LIHC TCGA-RC-A6M3-01A 6 3 5'UTR-CDS Intra-chr q24.2 q24.1 Seq+ 92992 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND4A-DPP8 DENND4A chr15 65729072 - DPP8 chr15 65512564 - Exonic hg38 LIHC TCGA-RC-A6M3-01A 3 13 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 92993 ChimerSeq TCGA FAWG TCGA_RNA-Seq ONECUT1-REC114 ONECUT1 chr15 52757086 - REC114 chr15 73540485 + Exonic hg38 LIHC TCGA-RC-A6M3-01A 3 10 3'UTR-CDS Intra-chr q21.3 Tumor suppressor gene Transcription factor q24.1 92994 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMG20A-SCAMP5 HMG20A chr15 77421004 + SCAMP5 chr15 75011792 + Exonic hg38 LIHC TCGA-RC-A6M3-01A 2 5 5'UTR-5'UTR Intra-chr q24.3 Transcription factor q24.2 Seq+ 92995 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSSK3-HDAC1 TSSK3 chr1 32353541 + HDAC1 chr1 32316665 + Exonic hg38 LIHC TCGA-RC-A6M3-01A 2 4 5'UTR-CDS Intra-chr p35.1 CAMK:TSSK p35.2 Tumor suppressor gene 92996 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIM2-GRIK1 SIM2 chr21 36699921 + GRIK1 chr21 29694063 - Exonic hg38 LIHC TCGA-RC-A6M3-01A 1 4 In-Frame Intra-chr q22.13 Transcription factor q21.3 Seq+ 92997 ChimerSeq TCGA FAWG TCGA_RNA-Seq HABP2-LAPTM4B HABP2 chr10 113553190 + LAPTM4B chr8 97805353 + Exonic hg38 LIHC TCGA-RC-A6M4-01A 60 419 In-Frame Inter-chr q25.3 q22.1 Seq+ 92998 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP4F12-PTGER1 CYP4F12 chr19 15678405 + PTGER1 chr19 14474337 - Exonic hg38 LIHC TCGA-RC-A6M4-01A 9 180 CDS-5'UTR Intra-chr p13.12 p13.12 Seq+ 92999 ChimerSeq TCGA FAWG TCGA_RNA-Seq FHIT-TKT FHIT chr3 60821919 - TKT chr3 53242242 - Exonic hg38 LIHC TCGA-RC-A6M4-01A 4 4 5'UTR-CDS Intra-chr p14.2 Tumor suppressor gene p21.1 Tumor suppressor gene Seq+ 93000 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJB1-PRKACA DNAJB1 chr19 14518139 - PRKACA chr19 14107409 - Exonic hg38 LIHC TCGA-RC-A6M5-01A 143 688 In-Frame Intra-chr p13.12 Tumor suppressor gene p13.12 KB Pub Seq+ 93001 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENPP1-CDX1 ENPP1 chr6 131860506 + CDX1 chr5 150182768 + Exonic hg38 LIHC TCGA-RC-A6M5-01A 27 94 Out-of-frame Inter-chr q23.2 q32 Transcription factor Seq+ 93002 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST7-COG5 ST7 chr7 116953691 + COG5 chr7 107412632 - Exonic hg38 LIHC TCGA-RC-A6M6-01A 70 351 5'UTR-5'UTR Intra-chr q31.2 Tumor suppressor gene Seq+ 93003 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A14-FGF17 SLC39A14 chr8 22395079 + FGF17 chr8 22042860 + Exonic hg38 LIHC TCGA-RC-A6M6-01A 12 162 Out-of-frame Intra-chr p21.3 p21.3 93004 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRCAM-CFTR NRCAM chr7 108456243 - CFTR chr7 117665459 + Exonic hg38 LIHC TCGA-RC-A6M6-01A 8 34 5'UTR-CDS Intra-chr q31.1 Tumor suppressor gene q31.2 Tumor suppressor gene Seq+ 93005 ChimerSeq TCGA FAWG TCGA_RNA-Seq PNPLA8-CFTR PNPLA8 chr7 108487759 - CFTR chr7 117642438 + Exonic hg38 LIHC TCGA-RC-A6M6-01A 7 17 In-Frame Intra-chr q31.1 q31.2 Tumor suppressor gene Seq+ 93006 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTR3C-GIMAP2 ACTR3C chr7 150293312 - GIMAP2 chr7 150687052 + Exonic hg38 LIHC TCGA-RC-A6M6-01A 5 9 5'UTR-5'UTR Intra-chr q36.1 q36.1 Seq+ 93007 ChimerSeq TCGA FAWG TCGA_RNA-Seq OXR1-MET OXR1 chr8 106726309 + MET chr7 116771498 + Exonic hg38 LIHC TCGA-RC-A6M6-01A 2 14 In-Frame Inter-chr q23.1 q31.2 TK:Met Oncogene Seq+ 93008 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTUS1-FGL1 MTUS1 chr8 17713214 - FGL1 chr8 17885571 - Exonic hg38 LIHC TCGA-RC-A6M6-01A 1 2 CDS-5'UTR Intra-chr p22 Tumor suppressor gene p22 Seq+ 93009 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEX2-ANKFN1 TEX2 chr17 64263168 - ANKFN1 chr17 56482356 + Exonic hg38 LIHC TCGA-RC-A7SB-01A 3 21 5'UTR-CDS Intra-chr q23.3 q22 Seq+ 93010 ChimerSeq TCGA FAWG TCGA_RNA-Seq DICER1-EIF5 DICER1 chr14 95157230 - EIF5 chr14 103337116 + Exonic hg38 LIHC TCGA-RC-A7SF-01A 4 4 5'UTR-CDS Intra-chr q32.13 Oncogene Tumor suppressor gene q32.32 Seq+ 93011 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBCK1-TRIB3 RBCK1 chr20 417930 + TRIB3 chr20 388011 + Exonic hg38 LIHC TCGA-RC-A7SK-01A 4 4 In-Frame Intra-chr p13 Transcription factor p13 Seq+ 93012 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASAP1-KHDRBS3 ASAP1 chr8 130358017 - KHDRBS3 chr8 135521237 + Exonic hg38 LIHC TCGA-RC-A7SK-01A 1 2 Out-of-frame Intra-chr q24.22 q24.23 Seq+ 93013 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUNX1T1-IGKJ3 RUNX1T1 chr8 92010620 - IGKJ3 chr2 88861257 - Exonic hg38 LIHC TCGA-RG-A7D4-01A 208 0 Out-of-frame Inter-chr q21.3 Oncogene p11.2 93014 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT16-RAD51B GALNT16 chr14 69260467 + RAD51B chr14 68291884 + Exonic hg38 LIHC TCGA-UB-A7MA-01A 6 32 In-Frame Intra-chr q24.1 q24.1 Seq+ 93015 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUGP1-PEPD SUGP1 chr19 19316422 - PEPD chr19 33413643 - Exonic hg38 LIHC TCGA-UB-A7MA-01A 8 18 In-Frame Intra-chr p13.11 q13.11 Seq+ 93016 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX49-NCAN DDX49 chr19 18920703 + NCAN chr19 19216947 + Exonic hg38 LIHC TCGA-UB-A7MA-01A 5 24 5'UTR-5'UTR Intra-chr p13.11 p13.11 Seq+ 93017 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBAP2L-TDRKH UBAP2L chr1 154220975 + TDRKH chr1 151783049 - Exonic hg38 LIHC TCGA-UB-A7MA-01A 6 9 5'UTR-5'UTR Intra-chr q21.3 q21.3 Seq+ 93018 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP23-TSSK6 ARHGAP23 chr17 38500628 + TSSK6 chr19 19512542 - Exonic hg38 LIHC TCGA-UB-A7MA-01A 4 6 3'UTR-3'UTR Inter-chr q12 p13.11 93019 ChimerSeq TCGA FAWG TCGA_RNA-Seq DST-EYS DST chr6 56526361 - EYS chr6 65495993 - Exonic hg38 LIHC TCGA-UB-A7MA-01A 1 6 CDS-5'UTR Intra-chr p12.1 Oncogene q12 Seq+ 93020 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGAV-IFT172 ITGAV chr2 186602151 + IFT172 chr2 27485503 - Exonic hg38 LIHC TCGA-UB-A7MA-01A 1 4 Out-of-frame Intra-chr q32.1 Tumor suppressor gene p23.3 Seq+ 93021 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1B-ITGAV MYO1B chr2 191245611 + ITGAV chr2 186622339 + Exonic hg38 LIHC TCGA-UB-A7MA-01A 1 2 5'UTR-CDS Intra-chr q32.3 q32.1 Tumor suppressor gene 93022 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP4R3B-PNPT1 PPP4R3B chr2 55603978 - PNPT1 chr2 55637599 - Exonic hg38 LIHC TCGA-UB-A7MB-01A 8 60 In-Frame Intra-chr p16.1 p16.1 93023 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLIS3-GOLM1 GLIS3 chr9 4286038 - GOLM1 chr9 86046572 - Exonic hg38 LIHC TCGA-UB-A7MB-01A 5 9 In-Frame Intra-chr p24.2 Transcription factor q21.33 Seq+ 93024 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK3-DIO3OS MARK3 chr14 103480490 + DIO3OS chr14 101552754 - Exonic hg38 LIHC TCGA-UB-A7MB-01A 4 7 CDS-3'UTR Intra-chr q32.32 CAMK:CAMKL q32.31 Seq+ 93025 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC35E1-EPS15L1 SLC35E1 chr19 16566532 - EPS15L1 chr19 16418104 - Exonic hg38 LIHC TCGA-UB-A7MB-01A 1 9 Out-of-frame Intra-chr p13.11 p13.11 93026 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP2E1-GLUL CYP2E1 chr10 133532284 + GLUL chr1 182385556 - Exonic hg38 LIHC TCGA-UB-A7MC-01A 1 43 In-Frame Inter-chr q26.3 q25.3 93027 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBXIP1-GBAP1 PBXIP1 chr1 154953671 - GBAP1 chr1 155218049 - Exonic hg38 LIHC TCGA-UB-A7MC-01A 2 27 CDS-5'UTR Intra-chr q21.3 q22 Seq+ 93028 ChimerSeq TCGA FAWG TCGA_RNA-Seq MT1G-PRKAR1A MT1G chr16 56666952 - PRKAR1A chr17 68524117 + Exonic hg38 LIHC TCGA-UB-A7MC-01A 8 1 Out-of-frame Inter-chr q13 Tumor suppressor gene q24.2 Oncogene Tumor suppressor gene 93029 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL37-TTC33 RPL37 chr5 40832442 - TTC33 chr5 40513069 - Exonic hg38 LIHC TCGA-UB-A7ME-01A 35 39 3'UTR-3'UTR Intra-chr p13.1 p13.1 93030 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARN-AS PARN chr16 14599904 - AS chr11 32452021 + Exonic hg38 LIHC TCGA-UB-A7ME-01A 5 16 Out-of-frame Inter-chr 93031 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFRC-EBNA1BP2 TFRC chr3 196060180 - EBNA1BP2 chr1 43261918 - Exonic hg38 LIHC TCGA-WJ-A86L-01A 155 88 CDS-5'UTR Inter-chr q29 p34.2 Seq+ 93032 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPS1-PLCD4 CPS1 chr2 210579770 + PLCD4 chr2 218615707 + Exonic hg38 LIHC TCGA-WJ-A86L-01A 8 65 5'UTR-5'UTR Intra-chr q34 q35 Seq+ 93033 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPAM-GUCY2GP GPAM chr10 112172182 - GUCY2GP chr10 112339186 - Exonic hg38 LIHC TCGA-WJ-A86L-01A 8 15 CDS-3'UTR Intra-chr q25.2 q25.2 Seq+ 93034 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNM2-SBNO1 PITPNM2 chr12 122983998 - SBNO1 chr12 123292567 - Exonic hg38 LIHC TCGA-WJ-A86L-01A 6 23 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 93035 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDH1A1-MIR4290HG ALDH1A1 chr9 72905958 - MIR4290HG chr9 90026099 - Exonic hg38 LIHC TCGA-WJ-A86L-01A 4 30 CDS-3'UTR Intra-chr q21.13 q22.2 93036 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDLRAD1-TMEM59 LDLRAD1 chr1 54010282 - TMEM59 chr1 54032305 - Exonic hg38 LIHC TCGA-WJ-A86L-01A 7 8 Out-of-frame Intra-chr p32.3 p32.3 Seq+ 93037 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTMR3-CABP7 MTMR3 chr22 29957088 + CABP7 chr22 29727662 + Exonic hg38 LIHC TCGA-WJ-A86L-01A 3 16 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 93038 ChimerSeq TCGA FAWG TCGA_RNA-Seq NHEJ1-DNPEP NHEJ1 chr2 219125471 - DNPEP chr2 219387163 - Exonic hg38 LIHC TCGA-WJ-A86L-01A 1 6 CDS-5'UTR Intra-chr q35 q35 93039 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABHD17A-AP3D1 ABHD17A chr19 1881235 - AP3D1 chr19 2138714 - Exonic hg38 LIHC TCGA-WJ-A86L-01A 1 1 Out-of-frame Intra-chr p13.3 p13.3 93040 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCY10-MPC2 ADCY10 chr1 167913976 - MPC2 chr1 167920631 - Exonic hg38 LIHC TCGA-WX-AA47-01A 1 2 5'UTR-CDS Intra-chr q24.2 q24.2 93041 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAP1-METTL2B ADAP1 chr7 954396 - METTL2B chr7 128501762 + Exonic hg38 LIHC TCGA-XR-A8TD-01A 3 4 In-Frame Intra-chr p22.3 q32.1 93042 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGF2-REG3A IGF2 chr11 2138761 - REG3A chr2 79157119 - Exonic hg38 LIHC TCGA-XR-A8TE-01A 3 41 Out-of-frame Inter-chr p15.5 Oncogene p12 Seq+ 93043 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAM-REG3A BCAM chr19 44821047 + REG3A chr2 79158751 - Exonic hg38 LIHC TCGA-XR-A8TE-01A 1000 1000 Out-of-frame Inter-chr q13.32 p12 93044 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGMT-SNORA31 MGMT chr10 129467296 + SNORA31 chr14 41594478 + Exonic hg38 LIHC TCGA-XR-A8TF-01A 11 20 5'UTR-3'UTR Inter-chr q26.3 q21.3 93045 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLD2-GCK POLD2 chr7 44123511 - GCK chr7 44153463 - Exonic hg38 LIHC TCGA-XR-A8TF-01A 5 1 Out-of-frame Intra-chr p13 p13 STE:STE20 Seq+ 93046 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUFT1-SCNM1 TUFT1 chr1 151540426 + SCNM1 chr1 151166471 + Exonic hg38 LIHC TCGA-XR-A8TG-01A 11 46 In-Frame Intra-chr q21.3 q21.3 Seq+ 93047 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM222B-HAO2 FAM222B chr17 28790378 - HAO2 chr1 119392110 + Exonic hg38 LIHC TCGA-XR-A8TG-01A 8 56 5'UTR-CDS Inter-chr q11.2 p12 93048 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK1-RPL23A TAOK1 chr17 29391024 + RPL23A chr17 28720707 + Exonic hg38 LIHC TCGA-XR-A8TG-01A 15 24 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 93049 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC24A-JADE2 SEC24A chr5 134718173 + JADE2 chr5 134576768 + Exonic hg38 LIHC TCGA-XR-A8TG-01A 8 46 Out-of-frame Intra-chr q31.1 q31.1 93050 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIAPH2-NRP2 DIAPH2 chrX 96685190 + NRP2 chr2 205792235 + Exonic hg38 LIHC TCGA-XR-A8TG-01A 12 20 Out-of-frame Inter-chr q21.33 q33.3 Seq+ 93051 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLF10-NUBPL KLF10 chr8 102655566 - NUBPL chr14 31526052 + Exonic hg38 LIHC TCGA-XR-A8TG-01A 7 21 CDS-5'UTR Inter-chr q22.3 Tumor suppressor gene Transcription factor q12 Seq+ 93052 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNJ2-GTF2H5 SYNJ2 chr6 158071794 + GTF2H5 chr6 158191977 + Exonic hg38 LIHC TCGA-XR-A8TG-01A 8 15 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 93053 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSPA9-DDX19A HSPA9 chr5 138566626 - DDX19A chr16 70371372 + Exonic hg38 LIHC TCGA-XR-A8TG-01A 3 34 Out-of-frame Inter-chr q31.2 q22.1 Seq+ 93054 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC2A2-EIF5A2 SLC2A2 chr3 171002576 - EIF5A2 chr3 170894423 - Exonic hg38 LIHC TCGA-XR-A8TG-01A 4 28 In-Frame Intra-chr q26.2 q26.2 93055 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAZ1B-BCL7B BAZ1B chr7 73465439 - BCL7B chr7 73552242 - Exonic hg38 LIHC TCGA-XR-A8TG-01A 5 17 In-Frame Intra-chr q11.23 q11.23 Seq+ 93056 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIFC3-CNGB1 KIFC3 chr16 57862729 - CNGB1 chr16 57940321 - Exonic hg38 LIHC TCGA-XR-A8TG-01A 4 15 5'UTR-CDS Intra-chr q21 q21 Seq+ 93057 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPL-CCER2 HNRNPL chr19 38843842 - CCER2 chr19 38909325 - Exonic hg38 LIHC TCGA-XR-A8TG-01A 2 15 5'UTR-5'UTR Intra-chr 93058 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPIPB14P-WDR88 NPIPB14P chr16 69982350 - WDR88 chr19 33137677 + Exonic hg38 LIHC TCGA-XR-A8TG-01A 3 9 Out-of-frame Inter-chr q22.1 q13.11 93059 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDXDC2P-WDR88 PDXDC2P chr16 69982350 - WDR88 chr19 33137677 + Exonic hg38 LIHC TCGA-XR-A8TG-01A 3 9 Out-of-frame Inter-chr q22.1 q13.11 Seq+ 93060 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPAS1-SYPL2 EPAS1 chr2 46297937 + SYPL2 chr1 109467059 + Exonic hg38 LIHC TCGA-XR-A8TG-01A 3 8 Out-of-frame Inter-chr p21 Tumor suppressor gene Transcription factor p13.3 Seq+ 93061 ChimerSeq TCGA FAWG TCGA_RNA-Seq CORO1C-PACRG CORO1C chr12 108731429 - PACRG chr6 163314827 + Exonic hg38 LIHC TCGA-XR-A8TG-01A 2 10 5'UTR-CDS Inter-chr q24.11 q26 Tumor suppressor gene Seq+ 93062 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM35A-PAPSS2 FAM35A chr10 87096989 + PAPSS2 chr10 87741235 + Exonic hg38 LIHC TCGA-XR-A8TG-01A 2 10 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 93063 ChimerSeq TCGA FAWG TCGA_RNA-Seq LSR-GRAMD1A LSR chr19 35262692 + GRAMD1A chr19 35009119 + Exonic hg38 LIHC TCGA-XR-A8TG-01A 2 8 Out-of-frame Intra-chr q13.12 q13.11 Seq+ 93064 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDA1-MYO9B DDA1 chr19 17315995 + MYO9B chr19 17159395 + Exonic hg38 LIHC TCGA-XR-A8TG-01A 1 10 In-Frame Intra-chr p13.11 p13.11 Seq+ 93065 ChimerSeq TCGA FAWG TCGA_RNA-Seq POMT1-PLPP7 POMT1 chr9 131511467 + PLPP7 chr9 131307923 + Exonic hg38 LIHC TCGA-XR-A8TG-01A 3 2 Out-of-frame Intra-chr q34.13 q34.13 93066 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPATS2L-AOX3P SPATS2L chr2 200306601 + AOX3P chr2 200691872 + Exonic hg38 LIHC TCGA-XR-A8TG-01A 1 9 Out-of-frame Intra-chr q33.1 q33.1 93067 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAM-IGSF23 BCAM chr19 44814760 + IGSF23 chr19 44627420 + Exonic hg38 LIHC TCGA-XR-A8TG-01A 2 4 In-Frame Intra-chr q13.32 q13.31 Seq+ 93068 ChimerSeq TCGA FAWG TCGA_RNA-Seq HTRA1-ARMS2 HTRA1 chr10 122462124 + ARMS2 chr10 122456907 + Exonic hg38 LIHC TCGA-XR-A8TG-01A 2 2 Out-of-frame Intra-chr q26.13 Tumor suppressor gene q26.13 Seq+ 93069 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-RAB11FIP4 NF1 chr17 31265339 + RAB11FIP4 chr17 31517651 + Exonic hg38 LIHC TCGA-XR-A8TG-01A 1 3 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 93070 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEC-SLC10A1 PLEC chr8 143973403 - SLC10A1 chr14 69779360 - Exonic hg38 LIHC TCGA-XR-A8TG-01A 1 2 Out-of-frame Inter-chr q24.3 q24.1 93071 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP3A43-ZSCAN25 CYP3A43 chr7 99828186 + ZSCAN25 chr7 99629370 + Exonic hg38 LIHC TCGA-XR-A8TG-01A 1000 1000 Out-of-frame Intra-chr q22.1 q22.1 Transcription factor Seq+ 93072 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLSTN3-C1S CLSTN3 chr12 7136391 + C1S chr12 7061752 + Exonic hg38 LIHC TCGA-ZP-A9CZ-01A 21 123 CDS-5'UTR Intra-chr p13.31 p13.31 Seq+ 93073 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2F2-GPC5 GTF2F2 chr13 45120721 + GPC5 chr13 92144830 + Exonic hg38 LIHC TCGA-ZP-A9CZ-01A 9 35 In-Frame Intra-chr q14.12 q31.3 Tumor suppressor gene Seq+ 93074 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP45-ASCC3 USP45 chr6 99464604 - ASCC3 chr6 100540387 - Exonic hg38 LIHC TCGA-ZP-A9D0-01A 5 24 In-Frame Intra-chr q16.2 q16.3 Seq+ 93075 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGA-CPS1 FGA chr4 154585538 - CPS1 chr2 210677887 + Exonic hg38 LIHC TCGA-ZP-A9D0-01A 1 7 Out-of-frame Inter-chr q31.3 q34 93076 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOX13-PSD2 SOX13 chr1 204073711 + PSD2 chr5 139809391 + Exonic hg38 LIHC TCGA-ZP-A9D0-01A 1 7 5'UTR-5'UTR Inter-chr q32.1 Transcription factor q31.2 93077 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYC1-FGA CYC1 chr8 144096250 + FGA chr4 154586918 - Exonic hg38 LIHC TCGA-ZP-A9D0-01A 1 1 In-Frame Inter-chr q24.3 q31.3 93078 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBLCP1-CSNK1A1 UBLCP1 chr5 159269069 + CSNK1A1 chr5 149496860 - Exonic hg38 LIHC TCGA-ZP-A9D4-01A 1 43 In-Frame Intra-chr q33.3 q32 Tumor suppressor gene Seq+ 93079 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL17-SPINK14 FBXL17 chr5 108348399 - SPINK14 chr5 148174234 + Exonic hg38 LIHC TCGA-ZP-A9D4-01A 1 3 In-Frame Intra-chr q21.3 q32 Seq+ 93080 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF23-TOM1 PHF23 chr17 7239246 - TOM1 chr22 35345725 + Exonic hg38 LIHC TCGA-ZS-A9CD-01A 6 7 Out-of-frame Inter-chr p13.1 q12.3 Seq+ 93081 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC187-INPP5E CCDC187 chr9 136292161 - INPP5E chr9 136429807 - Exonic hg38 LIHC TCGA-ZS-A9CD-01A 4 12 Out-of-frame Intra-chr q34.3 q34.3 93082 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB40B-YBX2 RAB40B chr17 82698455 - YBX2 chr17 7290535 - Exonic hg38 LIHC TCGA-ZS-A9CD-01A 2 12 Out-of-frame Intra-chr q25.3 p13.1 Transcription factor Seq+ 93083 ChimerSeq TCGA FAWG TCGA_RNA-Seq VTN-SERPINC1 VTN chr17 28369289 - SERPINC1 chr1 173909942 - Exonic hg38 LIHC TCGA-ZS-A9CE-01A 1 11 In-Frame Inter-chr q11.2 q25.1 93084 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM2-RELB DNM2 chr19 10718403 + RELB chr19 45034244 + Exonic hg38 LIHC TCGA-ZS-A9CF-01A 24 51 Out-of-frame Intra-chr p13.2 q13.32 Transcription factor Seq+ 93085 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2AK1-GCK EIF2AK1 chr7 6054546 - GCK chr7 44150064 - Exonic hg38 LIHC TCGA-ZS-A9CF-01A 15 52 Out-of-frame Intra-chr p22.1 p13 STE:STE20 Seq+ 93086 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDH1A1-FXYD1 ALDH1A1 chr9 72924019 - FXYD1 chr19 35140076 + Exonic hg38 LIHC TCGA-ZS-A9CF-01A 11 26 CDS-5'UTR Inter-chr q21.13 q13.12 Seq+ 93087 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPN12-LGALS7 CAPN12 chr19 38741777 - LGALS7 chr19 38773103 - Exonic hg38 LIHC TCGA-ZS-A9CF-01A 9 31 5'UTR-5'UTR Intra-chr q13.2 Tumor suppressor gene Seq+ 93088 ChimerSeq TCGA FAWG TCGA_RNA-Seq NMD3-USP40 NMD3 chr3 161235212 + USP40 chr2 233498612 - Exonic hg38 LIHC TCGA-ZS-A9CF-01A 4 46 In-Frame Inter-chr q26.1 q37.1 Seq+ 93089 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRR14L-POLD4 PRR14L chr22 31749993 - POLD4 chr11 67353077 - Exonic hg38 LIHC TCGA-ZS-A9CF-01A 7 30 5'UTR-CDS Inter-chr q12.2 q13.2 Seq+ 93090 ChimerSeq TCGA FAWG TCGA_RNA-Seq C19orf60-NT5DC2 C19orf60 chr19 18588900 + NT5DC2 chr3 52529334 - Exonic hg38 LIHC TCGA-ZS-A9CF-01A 2 36 Out-of-frame Inter-chr p13.11 p21.1 Seq+ 93091 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP2C18-HELLS CYP2C18 chr10 94706960 + HELLS chr10 94571388 + Exonic hg38 LIHC TCGA-ZS-A9CF-01A 4 26 In-Frame Intra-chr q23.33 q23.33 Seq+ 93092 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM7-BICDL1 TRIM7 chr5 181200534 - BICDL1 chr12 119998532 + Exonic hg38 LIHC TCGA-ZS-A9CF-01A 3 26 Out-of-frame Inter-chr q35.3 q24.23 93093 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFNA1-ADAM15 EFNA1 chr1 155131634 + ADAM15 chr1 155062460 + Exonic hg38 LIHC TCGA-ZS-A9CF-01A 5 17 Out-of-frame Intra-chr q22 q21.3 Seq+ 93094 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHACTR4-SESN2 PHACTR4 chr1 28369825 + SESN2 chr1 28269183 + Exonic hg38 LIHC TCGA-ZS-A9CF-01A 2 18 5'UTR-3'UTR Intra-chr p35.3 Tumor suppressor gene p35.3 Seq+ 93095 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX23-RND1 DDX23 chr12 48852084 - RND1 chr12 48862118 - Exonic hg38 LIHC TCGA-ZS-A9CF-01A 4 9 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 93096 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEAD1-ZCCHC8 TEAD1 chr11 12674834 + ZCCHC8 chr12 122482695 - Exonic hg38 LIHC TCGA-ZS-A9CF-01A 1 16 5'UTR-5'UTR Inter-chr p15.3 Transcription factor q24.31 Seq+ 93097 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACOT12-SSBP2 ACOT12 chr5 81335768 - SSBP2 chr5 81489309 - Exonic hg38 LIHC TCGA-ZS-A9CF-01A 2 5 Out-of-frame Intra-chr q14.1 q14.1 Tumor suppressor gene Seq+ 93098 ChimerSeq TCGA FAWG TCGA_RNA-Seq BORCS7-WBP1L BORCS7 chr10 102862932 + WBP1L chr10 102809893 + Exonic hg38 LIHC TCGA-ZS-A9CF-01A 1 9 3'UTR-CDS Intra-chr q24.32 q24.32 93099 ChimerSeq TCGA FAWG TCGA_RNA-Seq CS-DGKD CS chr12 56300160 - DGKD chr2 233434380 + Exonic hg38 LIHC TCGA-ZS-A9CF-01A 1 3 In-Frame Inter-chr q13.3 Seq+ 93100 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALY-WDR53 RALY chr20 34072205 + WDR53 chr3 196554807 - Exonic hg38 LIHC TCGA-ZS-A9CF-01A 1 2 Out-of-frame Inter-chr q11.22 q29 Seq+ 93101 ChimerSeq TCGA FAWG TCGA_RNA-Seq FLOT2-RAD51B FLOT2 chr17 28897526 - RAD51B chr14 68611006 + Exonic hg38 LIHC TCGA-ZS-A9CG-01A 1 11 In-Frame Inter-chr q11.2 q24.1 Seq+ 93102 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOP1-CDH4 TOP1 chr20 41029455 + CDH4 chr20 61743563 + Exonic hg38 LUAD TCGA-05-4244-01A 43 78 CDS-3'UTR Intra-chr q12 Oncogene q13.33 Tumor suppressor gene Seq+ 93103 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLGAP4-PROCR DLGAP4 chr20 36465367 + PROCR chr20 35215893 + Exonic hg38 LUAD TCGA-05-4244-01A 23 37 Out-of-frame Intra-chr q11.23 q11.22 93104 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA6-TCFL5 NCOA6 chr20 34736690 - TCFL5 chr20 62842097 - Exonic hg38 LUAD TCGA-05-4244-01A 2 6 Out-of-frame Intra-chr q11.22 q13.33 Transcription factor Seq+ 93105 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP11A-MCF2L ATP11A chr13 112690455 + MCF2L chr13 112902199 + Exonic hg38 LUAD TCGA-05-4249-01A 11 14 CDS-5'UTR Intra-chr q34 q34 Seq+ 93106 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMTC1-ERGIC2 TMTC1 chr12 29751666 - ERGIC2 chr12 29371670 - Exonic hg38 LUAD TCGA-05-4250-01A 6 19 CDS-5'UTR Intra-chr p11.22 p11.22 Seq+ 93107 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMYD3-EDARADD SMYD3 chr1 246507054 - EDARADD chr1 236409216 + Exonic hg38 LUAD TCGA-05-4250-01A 1 7 Out-of-frame Intra-chr q44 Transcription factor q42.3 Seq+ 93108 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK1E-SPRR3 CSNK1E chr22 38298786 - SPRR3 chr1 153001754 + Exonic hg38 LUAD TCGA-05-4382-01A 4 18 CDS-5'UTR Inter-chr q13.1 q21.3 Seq+ 93109 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNC13B-TAF7L UNC13B chr9 35162305 + TAF7L chrX 101269237 - Exonic hg38 LUAD TCGA-05-4382-01A 2 10 Out-of-frame Inter-chr p13.3 q22.1 Seq+ 93110 ChimerSeq TCGA FAWG TCGA_RNA-Seq COQ6-ACOT4 COQ6 chr14 73961903 + ACOT4 chr14 73595049 + Exonic hg38 LUAD TCGA-05-4382-01A 2 5 In-Frame Intra-chr q24.3 q24.3 Seq+ 93111 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF229-PPP1R13L ZNF229 chr19 44432222 - PPP1R13L chr19 45402124 - Exonic hg38 LUAD TCGA-05-4382-01A 1 9 CDS-5'UTR Intra-chr q13.31 Transcription factor q13.32 93112 ChimerSeq TCGA FAWG TCGA_RNA-Seq UAP1-MDM2 UAP1 chr1 162561777 + MDM2 chr12 68809208 + Exonic hg38 LUAD TCGA-05-4382-01A 1 4 5'UTR-5'UTR Inter-chr q23.3 q15 Oncogene Seq+ 93113 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF260-SCGB2B2 ZNF260 chr19 36525155 - SCGB2B2 chr19 34593599 - Exonic hg38 LUAD TCGA-05-4389-01A 11 68 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.11 Seq+ 93114 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAPGEF2-DDX60L RAPGEF2 chr4 159104231 + DDX60L chr4 168537786 - Exonic hg38 LUAD TCGA-05-4389-01A 15 12 CDS-5'UTR Intra-chr q32.1 q32.3 93115 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR4435-AFF3 MIR4435 chr2 111494885 - AFF3 chr2 100142595 - Exonic hg38 LUAD TCGA-05-4389-01A 7 10 Out-of-frame Intra-chr q11.2 Oncogene 93116 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP6V1E1-BID ATP6V1E1 chr22 17612812 - BID chr22 17744013 - Exonic hg38 LUAD TCGA-05-4389-01A 1 3 In-Frame Intra-chr q11.21 q11.21 93117 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP3CA-RASGEF1B PPP3CA chr4 101108954 - RASGEF1B chr4 81602922 - Exonic hg38 LUAD TCGA-05-4390-01A 1 20 CDS-5'UTR Intra-chr q24 q21.22 93118 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPC1-FGD4 NPC1 chr18 23544960 - FGD4 chr12 32598497 + Exonic hg38 LUAD TCGA-05-4395-01A 14 22 In-Frame Inter-chr q11.2 p11.21 Seq+ 93119 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD12-PTPRM ANKRD12 chr18 9137873 + PTPRM chr18 8394476 + Exonic hg38 LUAD TCGA-05-4395-01A 3 29 5'UTR-CDS Intra-chr p11.22 p11.23 Seq+ 93120 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEX14-KIF1B PEX14 chr1 10475002 + KIF1B chr1 10374316 + Exonic hg38 LUAD TCGA-05-4395-01A 8 4 Out-of-frame Intra-chr p36.22 p36.22 Tumor suppressor gene Seq+ 93121 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXNDC11-RORA TXNDC11 chr16 11721577 - RORA chr15 61176456 - Exonic hg38 LUAD TCGA-05-4395-01A 4 7 5'UTR-5'UTR Inter-chr p13.13 q22.2 Transcription factor 93122 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLN6-C15orf59 CLN6 chr15 68229502 - C15orf59 chr15 73740642 - Exonic hg38 LUAD TCGA-05-4395-01A 2 13 Out-of-frame Intra-chr q23 q24.1 Seq+ 93123 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALB-URM1 RALB chr2 120252980 + URM1 chr9 128387816 + Exonic hg38 LUAD TCGA-05-4395-01A 2 2 5'UTR-5'UTR Inter-chr q14.2 q34.11 Seq+ 93124 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A13-CHAMP1 SLC25A13 chr7 96131743 - CHAMP1 chr13 114321110 + Exonic hg38 LUAD TCGA-05-4395-01A 1 5 CDS-5'UTR Inter-chr q21.3 q34 Transcription factor 93125 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO10-DNAH5 MYO10 chr5 16877609 - DNAH5 chr5 13931244 - Exonic hg38 LUAD TCGA-05-4396-01A 1 6 CDS-3'UTR Intra-chr p15.1 p15.2 Seq+ 93126 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDXK-LCA5L PDXK chr21 43749080 + LCA5L chr21 39429211 - Exonic hg38 LUAD TCGA-05-4397-01A 5 27 CDS-5'UTR Intra-chr q22.3 q22.2 Seq+ 93127 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASA1-RAPGEF6 RASA1 chr5 87268990 + RAPGEF6 chr5 131446703 - Exonic hg38 LUAD TCGA-05-4397-01A 4 10 In-Frame Intra-chr q14.3 q31.1 Seq+ 93128 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAT4-ACKR3 STAT4 chr2 191146613 - ACKR3 chr2 236580440 + Exonic hg38 LUAD TCGA-05-4398-01A 32 156 CDS-5'UTR Intra-chr q32.3 Transcription factor q37.3 93129 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYPL1-AKR1D1 SYPL1 chr7 106097690 - AKR1D1 chr7 138097866 + Exonic hg38 LUAD TCGA-05-4398-01A 40 117 In-Frame Intra-chr q22.3 q33 Seq+ 93130 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2B4-ERBB4 ATP2B4 chr1 203627219 + ERBB4 chr2 212124903 - Exonic hg38 LUAD TCGA-05-4398-01A 7 33 5'UTR-CDS Inter-chr q32.1 q34 Oncogene Tumor suppressor gene Seq+ 93131 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRCC-MPTX1 PRCC chr1 156768239 + MPTX1 chr1 159276507 + Exonic hg38 LUAD TCGA-05-4398-01A 5 24 Out-of-frame Intra-chr q23.1 q23.2 93132 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC4-PTAFR EXOC4 chr7 133630141 + PTAFR chr1 28151059 - Exonic hg38 LUAD TCGA-05-4398-01A 6 18 CDS-5'UTR Inter-chr q33 p35.3 Seq+ 93133 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLPTM1-RPS5 CLPTM1 chr19 44955467 + RPS5 chr19 58393359 + Exonic hg38 LUAD TCGA-05-4398-01A 3 14 5'UTR-3'UTR Intra-chr q13.32 q13.43 Seq+ 93134 ChimerSeq TCGA FAWG TCGA_RNA-Seq FMN1-SNRPN FMN1 chr15 33008014 - SNRPN chr15 24886516 + Exonic hg38 LUAD TCGA-05-4398-01A 1 7 5'UTR-5'UTR Intra-chr q11.2 93135 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRWD1-HUNK BRWD1 chr21 39269899 - HUNK chr21 31968250 + Exonic hg38 LUAD TCGA-05-4398-01A 1 3 Out-of-frame Intra-chr q22.2 q22.11 CAMK:CAMKL Seq+ 93136 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD2AP-NFKBIE CD2AP chr6 47478248 + NFKBIE chr6 44260539 - Exonic hg38 LUAD TCGA-05-4402-01A 15 53 In-Frame Intra-chr p12.3 p21.1 Seq+ 93137 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPCAT1-TERT LPCAT1 chr5 1523710 - TERT chr5 1282624 - Exonic hg38 LUAD TCGA-05-4402-01A 8 25 3'UTR-3'UTR Intra-chr p15.33 Oncogene Seq+ 93138 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF644-PTGER3 ZNF644 chr1 91021689 - PTGER3 chr1 70852859 - Exonic hg38 LUAD TCGA-05-4402-01A 4 30 5'UTR-CDS Intra-chr p22.2 Transcription factor p31.1 Seq+ 93139 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL34-ST3GAL2 IL34 chr16 70580049 + ST3GAL2 chr16 70399533 - Exonic hg38 LUAD TCGA-05-4402-01A 3 7 5'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 93140 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTK2-UTP23 PTK2 chr8 140925661 - UTP23 chr8 116848888 + Exonic hg38 LUAD TCGA-05-4402-01A 1 6 3'UTR-3'UTR Intra-chr q24.3 q24.11 93141 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS41-C7orf72 VPS41 chr7 38869146 - C7orf72 chr7 50104314 + Exonic hg38 LUAD TCGA-05-4402-01A 1 3 Out-of-frame Intra-chr p14.1 p12.2 93142 ChimerSeq TCGA FAWG TCGA_RNA-Seq NR2F6-OCEL1 NR2F6 chr19 17240671 - OCEL1 chr19 17228256 + Exonic hg38 LUAD TCGA-05-4402-01A 1 2 Out-of-frame Intra-chr p13.11 Transcription factor p13.11 93143 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYPL1-AKR1D1 SYPL1 chr7 106097690 - AKR1D1 chr7 138097866 + Exonic hg38 LUAD TCGA-05-4403-01A 1 1 In-Frame Intra-chr q22.3 q33 Seq+ 93144 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL3A1-VMP1 COL3A1 chr2 189008142 + VMP1 chr17 59838295 + Exonic hg38 LUAD TCGA-05-4405-01A 1 3 Out-of-frame Inter-chr q32.2 q23.1 93145 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPKAPK3-HEMK1 MAPKAPK3 chr3 50617784 + HEMK1 chr3 50571710 + Exonic hg38 LUAD TCGA-05-4405-01A 1 3 In-Frame Intra-chr p21.2 CAMK:MAPKAPK p21.31 Seq+ 93146 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB10-MAD1L1 GRB10 chr7 50755887 - MAD1L1 chr7 2149238 - Exonic hg38 LUAD TCGA-05-4415-01A 6 27 Out-of-frame Intra-chr p12.1 p22.3 Tumor suppressor gene Seq+ 93147 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERC1-VWF ERC1 chr12 1263165 + VWF chr12 5976260 - Exonic hg38 LUAD TCGA-05-4415-01A 5 27 In-Frame Intra-chr p13.31 Seq+ 93148 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC91-NTSR1 CCDC91 chr12 28391411 + NTSR1 chr20 62754685 + Exonic hg38 LUAD TCGA-05-4415-01A 3 13 In-Frame Inter-chr p11.22 q13.33 Seq+ 93149 ChimerSeq TCGA FAWG TCGA_RNA-Seq URGCP-ABCA13 URGCP chr7 43887415 - ABCA13 chr7 48192959 + Exonic hg38 LUAD TCGA-05-4415-01A 2 6 Out-of-frame Intra-chr p13 p12.3 Seq+ 93150 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM131-SPATA16 TMEM131 chr2 97927426 - SPATA16 chr3 173049094 - Exonic hg38 LUAD TCGA-05-4417-01A 6 19 In-Frame Inter-chr q11.2 q26.31 Seq+ 93151 ChimerSeq TCGA FAWG TCGA_RNA-Seq UCKL1-ZBTB46 UCKL1 chr20 63944397 - ZBTB46 chr20 63747301 - Exonic hg38 LUAD TCGA-05-4418-01A 2 4 In-Frame Intra-chr q13.33 q13.33 Transcription factor Seq+ 93152 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIDN-ABCA7 MIDN chr19 1251901 + ABCA7 chr19 1061782 + Exonic hg38 LUAD TCGA-05-4418-01A 2 1 In-Frame Intra-chr p13.3 p13.3 Seq+ 93153 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIMKLB-A2ML1 RIMKLB chr12 8681818 + A2ML1 chr12 8874425 + Exonic hg38 LUAD TCGA-05-4418-01A 1000 1000 5'UTR-CDS Intra-chr p13.31 p13.31 93154 ChimerSeq TCGA FAWG TCGA_RNA-Seq TACC2-HS1BP3 TACC2 chr10 122132734 + HS1BP3 chr2 20638652 - Exonic hg38 LUAD TCGA-05-4420-01A 13 158 Out-of-frame Inter-chr q26.13 p24.1 Seq+ 93155 ChimerSeq TCGA FAWG TCGA_RNA-Seq MUT-SUPT3H MUT chr6 49463168 - SUPT3H chr6 45020632 - Exonic hg38 LUAD TCGA-05-4420-01A 16 40 Out-of-frame Intra-chr p12.3 p21.1 Seq+ 93156 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF3-DNAJC1 TAF3 chr10 7818875 + DNAJC1 chr10 21806099 - Exonic hg38 LUAD TCGA-05-4420-01A 6 28 Out-of-frame Intra-chr p14 p12.31 Seq+ 93157 ChimerSeq TCGA FAWG TCGA_RNA-Seq HAT1-EXOC6B HAT1 chr2 171979363 + EXOC6B chr2 72184187 - Exonic hg38 LUAD TCGA-05-4420-01A 6 15 In-Frame Intra-chr q31.1 p13.2 Seq+ 93158 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTK7-DLK2 PTK7 chr6 43076567 + DLK2 chr6 43454474 - Exonic hg38 LUAD TCGA-05-4420-01A 2 10 In-Frame Intra-chr p21.1 p21.1 Seq+ 93159 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNAP29-MAPK1 SNAP29 chr22 20870533 + MAPK1 chr22 21807846 - Exonic hg38 LUAD TCGA-05-4420-01A 1 3 In-Frame Intra-chr q11.21 q11.22 Oncogene 93160 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRSS12-TSPAN5 PRSS12 chr4 118352219 - TSPAN5 chr4 98574905 - Exonic hg38 LUAD TCGA-05-4420-01A 1 2 Out-of-frame Intra-chr q26 q23 93161 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAL2-ARFGEF1 MAL2 chr8 119208604 + ARFGEF1 chr8 67218138 - Exonic hg38 LUAD TCGA-05-4422-01A 123 230 In-Frame Intra-chr q24.12 q13.2 Seq+ 93162 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZHX1-RALYL ZHX1 chr8 123274217 - RALYL chr8 84774579 + Exonic hg38 LUAD TCGA-05-4422-01A 36 132 5'UTR-5'UTR Intra-chr q24.13 Transcription factor q21.2 Seq+ 93163 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDRG1-SNTB1 NDRG1 chr8 133280232 - SNTB1 chr8 120693908 - Exonic hg38 LUAD TCGA-05-4422-01A 26 106 Out-of-frame Intra-chr q24.22 Tumor suppressor gene q24.12 Seq+ 93164 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAD2-WDYHV1 ATAD2 chr8 123380529 - WDYHV1 chr8 123427924 + Exonic hg38 LUAD TCGA-05-4422-01A 1 49 In-Frame Intra-chr q24.13 q24.13 Seq+ 93165 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFR3A-CASC21 EFR3A chr8 131979422 + CASC21 chr8 127339281 + Exonic hg38 LUAD TCGA-05-4422-01A 4 32 5'UTR-5'UTR Intra-chr q24.22 q24.21 93166 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXT1-OC90 EXT1 chr8 117818435 - OC90 chr8 132033164 - Exonic hg38 LUAD TCGA-05-4422-01A 4 21 Out-of-frame Intra-chr q24.11 Oncogene Tumor suppressor gene q24.22 Seq+ 93167 ChimerSeq TCGA FAWG TCGA_RNA-Seq VASP-NDUFA3 VASP chr19 45507776 + NDUFA3 chr19 54105934 + Exonic hg38 LUAD TCGA-05-4422-01A 1 13 CDS-3'UTR Intra-chr q13.32 93168 ChimerSeq TCGA FAWG TCGA_RNA-Seq KHDRBS3-EFR3A KHDRBS3 chr8 135457954 + EFR3A chr8 131996406 + Exonic hg38 LUAD TCGA-05-4422-01A 2 8 In-Frame Intra-chr q24.23 q24.22 Seq+ 93169 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASAP1-RAD51B ASAP1 chr8 130187236 - RAD51B chr14 67823542 + Exonic hg38 LUAD TCGA-05-4422-01A 1 8 CDS-5'UTR Inter-chr q24.22 q24.1 Seq+ 93170 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO33-CNGB3 FBXO33 chr14 39432301 - CNGB3 chr8 86726657 - Exonic hg38 LUAD TCGA-05-4422-01A 1000 1000 5'UTR-CDS Inter-chr q21.1 q21.3 93171 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO10-ST6GALNAC3 MYO10 chr5 16935788 - ST6GALNAC3 chr1 76313805 + Exonic hg38 LUAD TCGA-05-4424-01A 1 11 In-Frame Inter-chr p15.1 p31.1 Seq+ 93172 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC34A2-ROS1 SLC34A2 chr4 25676702 + ROS1 chr6 117324415 - Exonic hg38 LUAD TCGA-05-4426-01A 148 1146 Out-of-frame Inter-chr p15.2 q22.1 Oncogene KB Pub Seq+ 93173 ChimerSeq TCGA FAWG TCGA_RNA-Seq TICAM1-IL12RB1 TICAM1 chr19 4831614 - IL12RB1 chr19 18069713 - Exonic hg38 LUAD TCGA-05-4426-01A 21 132 5'UTR-CDS Intra-chr p13.3 p13.11 Seq+ 93174 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICAL3-SLC25A18 MICAL3 chr22 18001393 - SLC25A18 chr22 17587136 + Exonic hg38 LUAD TCGA-05-4426-01A 8 60 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 93175 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPBL-MYO10 NIPBL chr5 37010225 + MYO10 chr5 16877707 - Exonic hg38 LUAD TCGA-05-4426-01A 8 28 In-Frame Intra-chr p13.2 p15.1 Seq+ 93176 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC37-ELL CDC37 chr19 10403378 - ELL chr19 18472882 - Exonic hg38 LUAD TCGA-05-4426-01A 5 15 In-Frame Intra-chr p13.2 p13.11 Seq+ 93177 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKH-MXD3 ANKH chr5 14741827 - MXD3 chr5 177310540 - Exonic hg38 LUAD TCGA-05-4426-01A 4 17 Out-of-frame Intra-chr p15.2 q35.3 Transcription factor Seq+ 93178 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNMT1-AP1M1 DNMT1 chr19 10143766 - AP1M1 chr19 16233493 + Exonic hg38 LUAD TCGA-05-4426-01A 3 5 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene Transcription factor p13.11 Seq+ 93179 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP1M1-CYP4F11 AP1M1 chr19 16209177 + CYP4F11 chr19 15929601 - Exonic hg38 LUAD TCGA-05-4426-01A 1 9 In-Frame Intra-chr p13.11 p13.12 Seq+ 93180 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMAT5-KIAA1671 ZMAT5 chr22 29766949 - KIAA1671 chr22 25014430 + Exonic hg38 LUAD TCGA-05-4426-01A 1 3 5'UTR-5'UTR Intra-chr q12.2 q11.23 93181 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLN1-SFTPB TLN1 chr9 35716390 - SFTPB chr2 85659682 - Exonic hg38 LUAD TCGA-05-4426-01A 1 1 CDS-3'UTR Inter-chr p13.3 p11.2 93182 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLS3-BICDL1 PLS3 chrX 115640503 + BICDL1 chr12 120061710 + Exonic hg38 LUAD TCGA-05-4427-01A 60 377 In-Frame Inter-chr q23 q24.23 93183 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH1-CDKL3 CDH1 chr16 68822225 + CDKL3 chr5 134308466 - Exonic hg38 LUAD TCGA-05-4427-01A 11 55 Out-of-frame Inter-chr q22.1 Oncogene Tumor suppressor gene q31.1 CMGC:CDKL Seq+ 93184 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSE1-NOTCH3 GSE1 chr16 85613398 + NOTCH3 chr19 15166091 - Exonic hg38 LUAD TCGA-05-4427-01A 8 50 In-Frame Inter-chr q24.1 p13.12 Oncogene Tumor suppressor gene Seq+ 93185 ChimerSeq TCGA FAWG TCGA_RNA-Seq SWAP70-WEE1 SWAP70 chr11 9664278 + WEE1 chr11 9575888 + Exonic hg38 LUAD TCGA-05-4427-01A 5 62 In-Frame Intra-chr p15.4 p15.4 Seq+ 93186 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2CA-CDH3 PPP2CA chr5 134225760 - CDH3 chr16 68676385 + Exonic hg38 LUAD TCGA-05-4427-01A 2 33 Out-of-frame Inter-chr q31.1 Tumor suppressor gene q22.1 Seq+ 93187 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPRED1-TMCO5A SPRED1 chr15 38253217 + TMCO5A chr15 37935257 + Exonic hg38 LUAD TCGA-05-4427-01A 4 20 CDS-5'UTR Intra-chr q14 q14 Seq+ 93188 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGB6-CD302 ITGB6 chr2 160123791 - CD302 chr2 159783469 - Exonic hg38 LUAD TCGA-05-4427-01A 1 19 In-Frame Intra-chr q24.2 q24.2 93189 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFMBT1-GNL3 SFMBT1 chr3 53045816 - GNL3 chr3 52686769 + Exonic hg38 LUAD TCGA-05-4427-01A 2 15 5'UTR-5'UTR Intra-chr p21.1 p21.1 Seq+ 93190 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH1L-CCT3 ASH1L chr1 155477886 - CCT3 chr1 156312221 - Exonic hg38 LUAD TCGA-05-4427-01A 3 8 Out-of-frame Intra-chr q22 Transcription factor q22 Seq+ 93191 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITCH-NBPF26 ITCH chr20 34408792 + NBPF26 chr1 120763628 + Exonic hg38 LUAD TCGA-05-4427-01A 3 7 CDS-5'UTR Inter-chr q11.22 p11.2 93192 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIC-CRB3 NFIC chr19 3452666 + CRB3 chr19 6466466 + Exonic hg38 LUAD TCGA-05-4427-01A 1 9 In-Frame Intra-chr p13.3 Transcription factor p13.3 93193 ChimerSeq TCGA FAWG TCGA_RNA-Seq RGS3-BSPRY RGS3 chr9 113463881 + BSPRY chr9 113368259 + Exonic hg38 LUAD TCGA-05-4427-01A 2 5 Out-of-frame Intra-chr q32 q32 Seq+ 93194 ChimerSeq TCGA FAWG TCGA_RNA-Seq C3orf33-PLCH1 C3orf33 chr3 155802532 - PLCH1 chr3 155596378 - Exonic hg38 LUAD TCGA-05-4427-01A 1 4 Out-of-frame Intra-chr q25.31 q25.31 93195 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF27-UBQLN1 KIF27 chr9 83880297 - UBQLN1 chr9 83686155 - Exonic hg38 LUAD TCGA-05-4427-01A 1 4 In-Frame Intra-chr q21.32 q21.32 Seq+ 93196 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC42BPA-C5 CDC42BPA chr1 227317005 - C5 chr9 121017852 - Exonic hg38 LUAD TCGA-05-4427-01A 1 3 Out-of-frame Inter-chr q42.13 q33.2 Seq+ 93197 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSPG2-NTNG1 HSPG2 chr1 21895922 - NTNG1 chr1 107324282 + Exonic hg38 LUAD TCGA-05-4430-01A 2 4 Out-of-frame Intra-chr p36.12 p13.3 Seq+ 93198 ChimerSeq TCGA FAWG TCGA_RNA-Seq TADA1-CADM3 TADA1 chr1 166869445 - CADM3 chr1 159199751 + Exonic hg38 LUAD TCGA-05-4432-01A 50 208 In-Frame Intra-chr q24.1 q23.2 Tumor suppressor gene Seq+ 93199 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTBK2-SPATA5L1 TTBK2 chr15 42920438 - SPATA5L1 chr15 45417269 + Exonic hg38 LUAD TCGA-05-4432-01A 3 13 5'UTR-5'UTR Intra-chr q15.2 CK1:TTBK q21.1 Seq+ 93200 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFF4-TH2LCRR AFF4 chr5 132927121 - TH2LCRR chr5 132630891 - Exonic hg38 LUAD TCGA-05-4432-01A 2 10 CDS-3'UTR Intra-chr q31.1 q31.1 93201 ChimerSeq TCGA FAWG TCGA_RNA-Seq NARF-OLFML2B NARF chr17 82460072 + OLFML2B chr1 162020182 - Exonic hg38 LUAD TCGA-05-4432-01A 2 4 In-Frame Inter-chr q25.3 q23.3 Seq+ 93202 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPP3-FEZ1 DPP3 chr11 66486677 + FEZ1 chr11 125463570 - Exonic hg38 LUAD TCGA-05-4432-01A 2 3 In-Frame Intra-chr q13.2 q24.2 Tumor suppressor gene Seq+ 93203 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETNK1-GLT1D1 ETNK1 chr12 22625586 + GLT1D1 chr12 128945326 + Exonic hg38 LUAD TCGA-05-4434-01A 4 23 In-Frame Intra-chr p12.1 q24.33 Seq+ 93204 ChimerSeq TCGA FAWG TCGA_RNA-Seq PI4KA-ZNF274 PI4KA chr22 20747583 - ZNF274 chr19 58206720 + Exonic hg38 LUAD TCGA-05-4434-01A 3 5 Out-of-frame Inter-chr q11.21 q13.43 Transcription factor Seq+ 93205 ChimerSeq TCGA FAWG TCGA_RNA-Seq STYX-MDGA2 STYX chr14 52730531 + MDGA2 chr14 47301550 - Exonic hg38 LUAD TCGA-05-4434-01A 1 3 Out-of-frame Intra-chr q22.1 q21.3 93206 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUS1-DCBLD1 NUS1 chr6 117676085 + DCBLD1 chr6 117569620 + Exonic hg38 LUAD TCGA-05-5423-01A 1 3 In-Frame Intra-chr q22.1 q22.1 93207 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA3-GAREM1 LAMA3 chr18 23882045 + GAREM1 chr18 32270383 - Exonic hg38 LUAD TCGA-05-5425-01A 43 237 Out-of-frame Intra-chr q11.2 q12.1 Seq+ 93208 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACER3-PPME1 ACER3 chr11 76959031 + PPME1 chr11 74222312 + Exonic hg38 LUAD TCGA-05-5425-01A 4 15 In-Frame Intra-chr q13.5 q13.4 Seq+ 93209 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM39-BPIFA4P RBM39 chr20 35716740 - BPIFA4P chr20 33201532 + Exonic hg38 LUAD TCGA-05-5425-01A 1 17 CDS-5'UTR Intra-chr q11.22 q11.21 93210 ChimerSeq TCGA FAWG TCGA_RNA-Seq TESC-ECHDC3 TESC chr12 117056806 - ECHDC3 chr10 11747349 + Exonic hg38 LUAD TCGA-05-5425-01A 2 8 In-Frame Inter-chr q24.22 p14 Seq+ 93211 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX8-PCTP DHX8 chr17 43508520 + PCTP chr17 55822761 + Exonic hg38 LUAD TCGA-05-5425-01A 1 4 In-Frame Intra-chr q21.31 q22 93212 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB3-BCAR4 ERBB3 chr12 56100029 + BCAR4 chr16 11820297 - Exonic hg38 LUAD TCGA-05-5429-01A 28 224 CDS-3'UTR Inter-chr q13.2 Oncogene p13.13 Seq+ 93213 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCA-PITPNC1 PRKCA chr17 66496283 + PITPNC1 chr17 67532802 + Exonic hg38 LUAD TCGA-05-5429-01A 3 6 In-Frame Intra-chr q24.2 q24.2 Seq+ 93214 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT9-MPO SEPT9 chr17 77307197 + MPO chr17 58273669 - Exonic hg38 LUAD TCGA-05-5429-01A 1 10 Out-of-frame Intra-chr q22 Seq+ 93215 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC9A3R1-TTYH2 SLC9A3R1 chr17 74749287 + TTYH2 chr17 74260129 + Exonic hg38 LUAD TCGA-05-5429-01A 1 5 In-Frame Intra-chr q25.1 Tumor suppressor gene q25.1 93216 ChimerSeq TCGA FAWG TCGA_RNA-Seq DROSHA-SPEF2 DROSHA chr5 31483554 - SPEF2 chr5 35628460 + Exonic hg38 LUAD TCGA-05-5715-01A 3 1 In-Frame Intra-chr p13.3 p13.2 Seq+ 93217 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMCO4-KAZN TMCO4 chr1 19747163 - KAZN chr1 14180435 + Exonic hg38 LUAD TCGA-35-3615-01A 3 20 CDS-5'UTR Intra-chr p36.13 p36.21 93218 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASAP1-SAMD12 ASAP1 chr8 130358017 - SAMD12 chr8 118197732 - Exonic hg38 LUAD TCGA-35-4122-01A 8 9 Out-of-frame Intra-chr q24.22 q24.12 Seq+ 93219 ChimerSeq TCGA FAWG TCGA_RNA-Seq IP6K1-UBA7 IP6K1 chr3 49747818 - UBA7 chr3 49813942 - Exonic hg38 LUAD TCGA-35-4122-01A 3 2 CDS-5'UTR Intra-chr p21.31 p21.31 Seq+ 93220 ChimerSeq TCGA FAWG TCGA_RNA-Seq DST-HCST DST chr6 56843055 - HCST chr19 35903351 + Exonic hg38 LUAD TCGA-35-4123-01A 18 125 In-Frame Inter-chr p12.1 Oncogene q13.12 Seq+ 93221 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF3-ANO10 ARHGEF3 chr3 56773709 - ANO10 chr3 43432727 - Exonic hg38 LUAD TCGA-35-4123-01A 13 67 In-Frame Intra-chr p14.3 p21.33 Seq+ 93222 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-RNGTT PVT1 chr8 127794734 + RNGTT chr6 88801632 - Exonic hg38 LUAD TCGA-35-4123-01A 5 12 5'UTR-CDS Inter-chr q24.21 q15 93223 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAI14-TTC23L RAI14 chr5 34686955 + TTC23L chr5 34862898 + Exonic hg38 LUAD TCGA-35-4123-01A 1 7 Out-of-frame Intra-chr p13.2 p13.2 93224 ChimerSeq TCGA FAWG TCGA_RNA-Seq CXCL17-EXOSC5 CXCL17 chr19 42432976 - EXOSC5 chr19 41391962 - Exonic hg38 LUAD TCGA-35-5375-01A 3 6 In-Frame Intra-chr q13.2 q13.2 Seq+ 93225 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRBA-DRD3 LRBA chr4 150828180 - DRD3 chr3 114128912 - Exonic hg38 LUAD TCGA-35-5375-01A 2 5 Out-of-frame Inter-chr q31.3 q13.31 Seq+ 93226 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPRIP-SREBF1 MPRIP chr17 17042971 + SREBF1 chr17 17820521 - Exonic hg38 LUAD TCGA-35-5375-01A 2 2 Out-of-frame Intra-chr p11.2 p11.2 Transcription factor Seq+ 93227 ChimerSeq TCGA FAWG TCGA_RNA-Seq FDFT1-DEFB135 FDFT1 chr8 11821878 + DEFB135 chr8 11984421 + Exonic hg38 LUAD TCGA-35-5375-01A 1 3 5'UTR-5'UTR Intra-chr p23.1 p23.1 Seq+ 93228 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBED4-SUGCT ZBED4 chr22 49853989 + SUGCT chr7 40237635 + Exonic hg38 LUAD TCGA-38-4628-01A 6 31 5'UTR-CDS Inter-chr q13.33 Transcription factor p14.1 93229 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRIP1-RPSAP52 GRIP1 chr12 66596847 - RPSAP52 chr12 65759031 - Exonic hg38 LUAD TCGA-38-4628-01A 6 18 CDS-3'UTR Intra-chr q14.3 q14.3 Seq+ 93230 ChimerSeq TCGA FAWG TCGA_RNA-Seq GEMIN4-CRTC3 GEMIN4 chr17 752618 - CRTC3 chr15 90617883 + Exonic hg38 LUAD TCGA-38-4628-01A 2 1 5'UTR-CDS Inter-chr p13.3 q26.1 93231 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF277-CPT1A ZNF277 chr7 112206807 + CPT1A chr11 68760338 - Exonic hg38 LUAD TCGA-38-4629-01A 5 41 Out-of-frame Inter-chr q31.1 Transcription factor q13.3 Seq+ 93232 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM48-PPP1R3A RBM48 chr7 92532549 + PPP1R3A chr7 113918297 - Exonic hg38 LUAD TCGA-38-4629-01A 6 19 Out-of-frame Intra-chr q21.2 q31.1 Seq+ 93233 ChimerSeq TCGA FAWG TCGA_RNA-Seq RCC1-PGA3 RCC1 chr1 28506084 + PGA3 chr11 61209842 + Exonic hg38 LUAD TCGA-38-4629-01A 2 8 5'UTR-CDS Inter-chr p35.3 q12.2 93234 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNHG3-PGA3 SNHG3 chr1 28508160 + PGA3 chr11 61209842 + Exonic hg38 LUAD TCGA-38-4629-01A 2 8 5'UTR-CDS Inter-chr p35.3 q12.2 93235 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA3A-MDFIC SEMA3A chr7 84194475 - MDFIC chr7 115015688 + Exonic hg38 LUAD TCGA-38-4629-01A 2 7 In-Frame Intra-chr q21.11 q31.1 Seq+ 93236 ChimerSeq TCGA FAWG TCGA_RNA-Seq APTX-PRSS3 APTX chr9 33025000 - PRSS3 chr9 33796643 + Exonic hg38 LUAD TCGA-38-4629-01A 2 6 5'UTR-CDS Intra-chr p21.1 p13.3 93237 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF4H-ELN EIF4H chr7 74190306 + ELN chr7 74035364 + Exonic hg38 LUAD TCGA-38-4630-01A 84 374 In-Frame Intra-chr q11.23 q11.23 Seq+ 93238 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLIC4-GRHL3 CLIC4 chr1 24745625 + GRHL3 chr1 24344897 + Exonic hg38 LUAD TCGA-38-4630-01A 96 188 In-Frame Intra-chr p36.11 p36.11 Transcription factor Seq+ 93239 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAP31-PDZD4 BCAP31 chrX 153720872 - PDZD4 chrX 153808595 - Exonic hg38 LUAD TCGA-38-4630-01A 36 137 Out-of-frame Intra-chr q28 q28 Seq+ 93240 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPEN-CERS4 SPEN chr1 15848150 + CERS4 chr19 8251076 + Exonic hg38 LUAD TCGA-38-4630-01A 31 143 CDS-5'UTR Inter-chr p36.21 Transcription factor p13.2 Seq+ 93241 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT5B-TESMIN KMT5B chr11 68213477 - TESMIN chr11 68713407 - Exonic hg38 LUAD TCGA-38-4630-01A 19 63 5'UTR-CDS Intra-chr q13.2 q13.3 93242 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZSWIM4-CCDC130 ZSWIM4 chr19 13823500 + CCDC130 chr19 13751608 + Exonic hg38 LUAD TCGA-38-4630-01A 18 60 CDS-5'UTR Intra-chr p13.13 p13.13 Seq+ 93243 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR34-ZER1 WDR34 chr9 128640691 - ZER1 chr9 128742745 - Exonic hg38 LUAD TCGA-38-4630-01A 3 119 In-Frame Intra-chr q34.11 q34.11 Seq+ 93244 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD2-FAM53A NSD2 chr4 1956188 + FAM53A chr4 1618111 - Exonic hg38 LUAD TCGA-38-4630-01A 14 69 CDS-3'UTR Intra-chr p16.3 p16.3 93245 ChimerSeq TCGA FAWG TCGA_RNA-Seq APOPT1-MARK3 APOPT1 chr14 103574170 + MARK3 chr14 103474993 + Exonic hg38 LUAD TCGA-38-4630-01A 6 97 Out-of-frame Intra-chr q32.33 q32.32 CAMK:CAMKL Seq+ 93246 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFMBT1-WNT7A SFMBT1 chr3 52969101 - WNT7A chr3 13875173 - Exonic hg38 LUAD TCGA-38-4630-01A 16 51 Out-of-frame Intra-chr p21.1 p25.1 Tumor suppressor gene Seq+ 93247 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB2-SS18L1 GRB2 chr17 75393551 - SS18L1 chr20 62172682 + Exonic hg38 LUAD TCGA-38-4630-01A 12 65 Out-of-frame Inter-chr q25.1 q13.33 Seq+ 93248 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD2-GSDMB NSD2 chr4 1956188 + GSDMB chr17 39912497 - Exonic hg38 LUAD TCGA-38-4630-01A 11 59 In-Frame Inter-chr p16.3 q21.1 93249 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL24-SLC22A16 METTL24 chr6 110298922 - SLC22A16 chr6 110457017 - Exonic hg38 LUAD TCGA-38-4630-01A 12 49 Out-of-frame Intra-chr q21 q21 Seq+ 93250 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF12-PLXDC1 PHF12 chr17 28950065 - PLXDC1 chr17 39109391 - Exonic hg38 LUAD TCGA-38-4630-01A 3 76 Out-of-frame Intra-chr q11.2 q12 Seq+ 93251 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOP3A-MYO18A TOP3A chr17 18299559 - MYO18A chr17 29103664 - Exonic hg38 LUAD TCGA-38-4630-01A 5 65 5'UTR-CDS Intra-chr q11.2 Oncogene Seq+ 93252 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC1A3-C20orf196 SLC1A3 chr5 36608604 + C20orf196 chr20 5772862 + Exonic hg38 LUAD TCGA-38-4630-01A 4 63 Out-of-frame Inter-chr p13.2 p12.3 Seq+ 93253 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS9-ULK4 ADAMTS9 chr3 64649637 - ULK4 chr3 41835971 - Exonic hg38 LUAD TCGA-38-4630-01A 8 42 In-Frame Intra-chr p14.1 Tumor suppressor gene p22.1 Other:ULK Seq+ 93254 ChimerSeq TCGA FAWG TCGA_RNA-Seq PACS2-RAD51B PACS2 chr14 105369900 + RAD51B chr14 68411424 + Exonic hg38 LUAD TCGA-38-4630-01A 6 49 Out-of-frame Intra-chr q32.33 q24.1 Seq+ 93255 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS9-ATP6V0E1P2 ADAMTS9 chr3 64649637 - ATP6V0E1P2 chr3 41859394 - Exonic hg38 LUAD TCGA-38-4630-01A 13 19 Out-of-frame Intra-chr p14.1 Tumor suppressor gene p22.1 93256 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFMID-TNRC6C AFMID chr17 78191060 + TNRC6C chr17 78064722 + Exonic hg38 LUAD TCGA-38-4630-01A 10 25 In-Frame Intra-chr q25.3 q25.3 Seq+ 93257 ChimerSeq TCGA FAWG TCGA_RNA-Seq CC2D1A-RNF207 CC2D1A chr19 13919202 + RNF207 chr1 6218289 + Exonic hg38 LUAD TCGA-38-4630-01A 9 25 Out-of-frame Inter-chr p13.12 Transcription factor p36.31 Seq+ 93258 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFCP2-BIN2 TFCP2 chr12 51095153 - BIN2 chr12 51303141 - Exonic hg38 LUAD TCGA-38-4630-01A 6 32 3'UTR-CDS Intra-chr q13.13 Transcription factor q13.13 Seq+ 93259 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP6NL-ARMC3 USP6NL chr10 11489102 - ARMC3 chr10 23008836 + Exonic hg38 LUAD TCGA-38-4630-01A 5 35 Out-of-frame Intra-chr p14 p12.2 Seq+ 93260 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGO2-MROH5 AGO2 chr8 140547468 - MROH5 chr8 141495483 - Exonic hg38 LUAD TCGA-38-4630-01A 4 38 CDS-5'UTR Intra-chr q24.3 Seq+ 93261 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNC45A-BLM UNC45A chr15 90950615 + BLM chr15 90754811 + Exonic hg38 LUAD TCGA-38-4630-01A 7 26 In-Frame Intra-chr q26.1 q26.1 Oncogene Tumor suppressor gene Seq+ 93262 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAR1A-NPFFR1 SAR1A chr10 70170413 - NPFFR1 chr10 70266391 - Exonic hg38 LUAD TCGA-38-4630-01A 5 29 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 93263 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAB2-ALG8 GAB2 chr11 78417646 - ALG8 chr11 78109581 - Exonic hg38 LUAD TCGA-38-4630-01A 4 31 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 93264 ChimerSeq TCGA FAWG TCGA_RNA-Seq MROH1-ZNF623 MROH1 chr8 144200541 + ZNF623 chr8 143649898 + Exonic hg38 LUAD TCGA-38-4630-01A 5 22 CDS-3'UTR Intra-chr q24.3 Transcription factor Seq+ 93265 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL2-HM13 OSBPL2 chr20 62273406 + HM13 chr20 31514481 + Exonic hg38 LUAD TCGA-38-4630-01A 3 30 CDS-5'UTR Intra-chr q13.33 q11.21 Seq+ 93266 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPON1-PIK3R3 SPON1 chr11 14135568 + PIK3R3 chr1 46046625 - Exonic hg38 LUAD TCGA-38-4630-01A 2 33 Out-of-frame Inter-chr p15.2 p34.1 Seq+ 93267 ChimerSeq TCGA FAWG TCGA_RNA-Seq FHOD3-ZNF271P FHOD3 chr18 36298000 + ZNF271P chr18 35326797 + Exonic hg38 LUAD TCGA-38-4630-01A 7 12 CDS-3'UTR Intra-chr q12.2 q12.2 93268 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD5-MFAP1 FRMD5 chr15 44194953 - MFAP1 chr15 43817448 - Exonic hg38 LUAD TCGA-38-4630-01A 5 15 Out-of-frame Intra-chr q15.3 q15.3 Seq+ 93269 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM189-PXMP4 TMEM189 chr20 50127975 - PXMP4 chr20 33714736 - Exonic hg38 LUAD TCGA-38-4630-01A 5 14 Out-of-frame Intra-chr q13.13 q11.22 Seq+ 93270 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0907-ACBD3 KIAA0907 chr1 155914217 - ACBD3 chr1 226146821 - Exonic hg38 LUAD TCGA-38-4630-01A 4 15 Out-of-frame Intra-chr q22 q42.12 Seq+ 93271 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC23A2-PHKB SLC23A2 chr20 4883642 - PHKB chr16 47641035 + Exonic hg38 LUAD TCGA-38-4630-01A 6 6 Out-of-frame Inter-chr p13 q12.1 Seq+ 93272 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL2-TPX2 OSBPL2 chr20 62272259 + TPX2 chr20 31742541 + Exonic hg38 LUAD TCGA-38-4630-01A 2 21 CDS-5'UTR Intra-chr q13.33 q11.21 Seq+ 93273 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGD4-DNM1L FGD4 chr12 32399959 + DNM1L chr12 32731854 + Exonic hg38 LUAD TCGA-38-4630-01A 2 17 Out-of-frame Intra-chr p11.21 p11.21 93274 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK3-SMARCC1 DOCK3 chr3 50675300 + SMARCC1 chr3 47622341 - Exonic hg38 LUAD TCGA-38-4630-01A 5 4 Out-of-frame Intra-chr p21.2 p21.31 Tumor suppressor gene Seq+ 93275 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1D-PLA2G6 MYO1D chr17 32876778 - PLA2G6 chr22 38169471 - Exonic hg38 LUAD TCGA-38-4630-01A 3 11 CDS-5'UTR Inter-chr q11.2 q13.1 Seq+ 93276 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBAC1-QSOX2 UBAC1 chr9 135947798 - QSOX2 chr9 136226874 - Exonic hg38 LUAD TCGA-38-4630-01A 3 11 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 93277 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H3-KIAA0907 ZC3H3 chr8 143536257 - KIAA0907 chr1 155933849 - Exonic hg38 LUAD TCGA-38-4630-01A 2 14 Out-of-frame Inter-chr q22 Seq+ 93278 ChimerSeq TCGA FAWG TCGA_RNA-Seq FKBP2-C11orf84 FKBP2 chr11 64242558 + C11orf84 chr11 63817805 + Exonic hg38 LUAD TCGA-38-4630-01A 3 9 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 93279 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCEH1-LRCH4 NCEH1 chr3 172645623 - LRCH4 chr7 100577912 - Exonic hg38 LUAD TCGA-38-4630-01A 2 12 Out-of-frame Inter-chr q26.31 q22.1 Seq+ 93280 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMBOX1-SCARA3 HMBOX1 chr8 28891484 + SCARA3 chr8 27649702 + Exonic hg38 LUAD TCGA-38-4630-01A 1 14 5'UTR-CDS Intra-chr p21.1 Transcription factor p21.1 Seq+ 93281 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCGB2B2-ZNF599 SCGB2B2 chr19 34675630 - ZNF599 chr19 34769555 - Exonic hg38 LUAD TCGA-38-4630-01A 3 6 5'UTR-CDS Intra-chr q13.11 q13.11 Transcription factor 93282 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1799523 + TACC3 chr4 1727708 + Exonic hg38 LUAD TCGA-38-4630-01A 1 12 Out-of-frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 93283 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD51B-SIVA1 RAD51B chr14 67887204 + SIVA1 chr14 104766790 + Exonic hg38 LUAD TCGA-38-4630-01A 2 5 CDS-3'UTR Intra-chr q24.1 q32.33 93284 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDLIM1-SORBS1 PDLIM1 chr10 95247215 - SORBS1 chr10 95441180 - Exonic hg38 LUAD TCGA-38-4630-01A 1 7 CDS-5'UTR Intra-chr q23.33 q24.1 Seq+ 93285 ChimerSeq TCGA FAWG TCGA_RNA-Seq TK2-EXOC3L1 TK2 chr16 66536964 - EXOC3L1 chr16 67189683 - Exonic hg38 LUAD TCGA-38-4630-01A 1 7 5'UTR-5'UTR Intra-chr q21 q22.1 Seq+ 93286 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIX-DAND5 NFIX chr19 13090390 + DAND5 chr19 12973389 + Exonic hg38 LUAD TCGA-38-4630-01A 1 6 In-Frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 93287 ChimerSeq TCGA FAWG TCGA_RNA-Seq FDFT1-NEIL2 FDFT1 chr8 11809850 + NEIL2 chr8 11779598 + Exonic hg38 LUAD TCGA-38-4630-01A 1 5 5'UTR-5'UTR Intra-chr p23.1 p23.1 Seq+ 93288 ChimerSeq TCGA FAWG TCGA_RNA-Seq AZIN2-RBBP4 AZIN2 chr1 33084127 + RBBP4 chr1 32668225 + Exonic hg38 LUAD TCGA-38-4630-01A 1 4 Out-of-frame Intra-chr p35.1 p35.1 93289 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMN-TNFAIP2 AMN chr14 102930086 + TNFAIP2 chr14 103124375 + Exonic hg38 LUAD TCGA-38-4630-01A 1 3 CDS-5'UTR Intra-chr q32.32 q32.32 93290 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK9-GPR183 DOCK9 chr13 99086223 - GPR183 chr13 99296163 - Exonic hg38 LUAD TCGA-38-4630-01A 1 2 CDS-5'UTR Intra-chr q32.3 q32.3 93291 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPKAPK5-PTPN11 MAPKAPK5 chr12 111842769 + PTPN11 chr12 112446276 + Exonic hg38 LUAD TCGA-38-4630-01A 1 2 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.13 Oncogene Tumor suppressor gene 93292 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM1-NKAIN1 PUM1 chr1 31059204 - NKAIN1 chr1 31188187 - Exonic hg38 LUAD TCGA-38-4631-01A 9 79 In-Frame Intra-chr p35.2 p35.2 Seq+ 93293 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFEB-CAPZA2 TFEB chr6 41735350 - CAPZA2 chr7 116888127 + Exonic hg38 LUAD TCGA-38-4631-01A 5 15 5'UTR-CDS Inter-chr p21.1 Transcription factor q31.2 Seq+ 93294 ChimerSeq TCGA FAWG TCGA_RNA-Seq COG5-CBLL1 COG5 chr7 107412502 - CBLL1 chr7 107758143 + Exonic hg38 LUAD TCGA-38-4631-01A 1 10 5'UTR-5'UTR Intra-chr q22.3 Seq+ 93295 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLOCK-PHF21A CLOCK chr4 55453054 - PHF21A chr11 45979966 - Exonic hg38 LUAD TCGA-38-4631-01A 1 8 In-Frame Inter-chr q12 Transcription factor p11.2 Transcription factor Seq+ 93296 ChimerSeq TCGA FAWG TCGA_RNA-Seq HCG20-IMMP2L HCG20 chr6 30782126 + IMMP2L chr7 110963565 - Exonic hg38 LUAD TCGA-38-4631-01A 1 3 3'UTR-CDS Inter-chr q31.1 93297 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF121-VWA5A RNF121 chr11 71929124 + VWA5A chr11 124117497 + Exonic hg38 LUAD TCGA-38-4632-01A 11 41 5'UTR-5'UTR Intra-chr q13.4 q24.2 Tumor suppressor gene Seq+ 93298 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBL-VWA5A CBL chr11 119206612 + VWA5A chr11 124117497 + Exonic hg38 LUAD TCGA-38-4632-01A 6 46 CDS-5'UTR Intra-chr q23.3 Oncogene Tumor suppressor gene q24.2 Tumor suppressor gene Seq+ 93299 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYTL2-DOK5 SYTL2 chr11 85810954 - DOK5 chr20 54610388 + Exonic hg38 LUAD TCGA-38-4632-01A 6 37 5'UTR-CDS Inter-chr q14.1 q13.2 Seq+ 93300 ChimerSeq TCGA FAWG TCGA_RNA-Seq CADM1-ARCN1 CADM1 chr11 115504271 - ARCN1 chr11 118597707 + Exonic hg38 LUAD TCGA-38-4632-01A 5 19 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Seq+ 93301 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHST8-KCNJ15 CHST8 chr19 33689391 + KCNJ15 chr21 38296926 + Exonic hg38 LUAD TCGA-38-4632-01A 2 9 CDS-5'UTR Inter-chr q13.11 q22.13 Seq+ 93302 ChimerSeq TCGA FAWG TCGA_RNA-Seq SORL1-SYTL2 SORL1 chr11 121595772 + SYTL2 chr11 85717530 - Exonic hg38 LUAD TCGA-38-4632-01A 3 5 In-Frame Intra-chr q24.1 q14.1 Seq+ 93303 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKL2-G3BP2 CDKL2 chr4 75625821 - G3BP2 chr4 75648741 - Exonic hg38 LUAD TCGA-38-4632-01A 1 8 In-Frame Intra-chr q21.1 CMGC:CDKL q21.1 Seq+ 93304 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTD1-POU2F3 DTD1 chr20 18628233 + POU2F3 chr11 120315361 + Exonic hg38 LUAD TCGA-38-4632-01A 2 2 In-Frame Inter-chr p11.23 q23.3 Tumor suppressor gene Transcription factor Seq+ 93305 ChimerSeq TCGA FAWG TCGA_RNA-Seq MINK1-USO1 MINK1 chr17 4859328 + USO1 chr4 75799622 + Exonic hg38 LUAD TCGA-38-4632-01A 1 6 5'UTR-CDS Inter-chr p13.2 q21.1 Seq+ 93306 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLGAP1-ENOSF1 DLGAP1 chr18 3534194 - ENOSF1 chr18 675402 - Exonic hg38 LUAD TCGA-38-4632-01A 1 3 Out-of-frame Intra-chr p11.31 p11.32 Seq+ 93307 ChimerSeq TCGA FAWG TCGA_RNA-Seq APMAP-ZNF337 APMAP chr20 24983903 - ZNF337 chr20 25686466 - Exonic hg38 LUAD TCGA-38-6178-01A 2 20 CDS-5'UTR Intra-chr p11.21 p11.21 Transcription factor Seq+ 93308 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRJ-FCER1G PTPRJ chr11 48112983 + FCER1G chr1 161217986 + Exonic hg38 LUAD TCGA-38-6178-01A 2 12 In-Frame Inter-chr p11.2 Tumor suppressor gene q23.3 Seq+ 93309 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTDSS1-PTK2 PTDSS1 chr8 96309622 + PTK2 chr8 140830526 - Exonic hg38 LUAD TCGA-38-6178-01A 2 3 In-Frame Intra-chr q22.1 q24.3 Seq+ 93310 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFAND3-LYRM4 ZFAND3 chr6 37929999 + LYRM4 chr6 5109491 - Exonic hg38 LUAD TCGA-44-2656-01A 42 259 Out-of-frame Intra-chr p21.2 p25.1 Seq+ 93311 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEF1A2-ZBTB46 EEF1A2 chr20 63493137 - ZBTB46 chr20 63775962 - Exonic hg38 LUAD TCGA-44-2656-01A 2 20 In-Frame Intra-chr q13.33 q13.33 Transcription factor Seq+ 93312 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K13-LIPH MAP3K13 chr3 185465805 + LIPH chr3 185552613 - Exonic hg38 LUAD TCGA-44-2656-01A 1000 1000 Out-of-frame Intra-chr q27.2 q27.2 93313 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRD4-PGLYRP1 BRD4 chr19 15332290 - PGLYRP1 chr19 46019647 - Exonic hg38 LUAD TCGA-44-2657-01A 23 3 5'UTR-CDS Intra-chr p13.12 Atypical:BRD q13.32 93314 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF302-CACNA1A ZNF302 chr19 34678813 + CACNA1A chr19 13255259 - Exonic hg38 LUAD TCGA-44-2657-01A 4 17 In-Frame Intra-chr q13.11 Transcription factor p13.13 Seq+ 93315 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARS-CTDSP2 MARS chr12 57504299 + CTDSP2 chr12 57829596 - Exonic hg38 LUAD TCGA-44-2657-01A 1 10 Out-of-frame Intra-chr q13.3 q14.1 93316 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC16A7-OS9 SLC16A7 chr12 59596236 + OS9 chr12 57715760 + Exonic hg38 LUAD TCGA-44-2657-01A 2 5 5'UTR-CDS Intra-chr q14.1 q13.3 Seq+ 93317 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTPBP1-TOMM22 GTPBP1 chr22 38728161 + TOMM22 chr22 38682879 + Exonic hg38 LUAD TCGA-44-2659-01A 11 23 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 93318 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT11-EZH2 GALNT11 chr7 152025884 + EZH2 chr7 148832750 - Exonic hg38 LUAD TCGA-44-2659-01A 5 39 Out-of-frame Intra-chr q36.1 q36.1 Oncogene Tumor suppressor gene Seq+ 93319 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK1-ZNF385C TAOK1 chr17 29451680 + ZNF385C chr17 42034335 - Exonic hg38 LUAD TCGA-44-2659-01A 2 5 In-Frame Intra-chr q11.2 q21.2 Transcription factor Seq+ 93320 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTN4-RPS16 ACTN4 chr19 38647907 + RPS16 chr19 39435708 - Exonic hg38 LUAD TCGA-44-2662-01A 13 322 3'UTR-CDS Intra-chr q13.2 Seq+ 93321 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS16-TERT ADAMTS16 chr5 5191790 + TERT chr5 1282624 - Exonic hg38 LUAD TCGA-44-2662-01A 5 10 Out-of-frame Intra-chr p15.32 p15.33 Oncogene Seq+ 93322 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOMO3-INO80E NOMO3 chr16 16256158 + INO80E chr16 30000758 + Exonic hg38 LUAD TCGA-44-2662-01A 1 9 3'UTR-CDS Intra-chr p13.11 p11.2 93323 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROS1-CLTC ROS1 chr6 117288686 - CLTC chr17 59693728 + Exonic hg38 LUAD TCGA-44-2665-01A 11 111 Out-of-frame Inter-chr q22.1 Oncogene q23.1 Seq+ 93324 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLTC-ROS1 CLTC chr17 59690711 + ROS1 chr6 117321394 - Exonic hg38 LUAD TCGA-44-2665-01A 11 109 In-Frame Inter-chr q23.1 q22.1 Oncogene Seq+ 93325 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSB-CASP8 SSB chr2 169798976 + CASP8 chr2 201266461 + Exonic hg38 LUAD TCGA-44-2665-01A 1 1 5'UTR-5'UTR Intra-chr q31.1 q33.1 Oncogene Tumor suppressor gene 93326 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN14-VDAC2 TSPAN14 chr10 80489314 + VDAC2 chr10 75229644 + Exonic hg38 LUAD TCGA-44-2666-01A 2 1 In-Frame Intra-chr q23.1 q22.2 Seq+ 93327 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEN1-TMEM94 TEN1 chr17 75979511 + TMEM94 chr17 75471800 + Exonic hg38 LUAD TCGA-44-2668-01A 5 13 5'UTR-5'UTR Intra-chr q25.1 q25.1 93328 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC16A1-SENP6 SLC16A1 chr1 112929092 - SENP6 chr6 75621532 + Exonic hg38 LUAD TCGA-44-2668-01A 3 8 5'UTR-CDS Inter-chr q14.1 Seq+ 93329 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIDN-ARID3A MIDN chr19 1250529 + ARID3A chr19 971878 + Exonic hg38 LUAD TCGA-44-2668-01A 1 8 Out-of-frame Intra-chr p13.3 p13.3 Transcription factor 93330 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSBN1L-PTPN12 RSBN1L chr7 77768803 + PTPN12 chr7 77585543 + Exonic hg38 LUAD TCGA-44-2668-01A 2 3 Out-of-frame Intra-chr q11.23 q11.23 Tumor suppressor gene Seq+ 93331 ChimerSeq TCGA FAWG TCGA_RNA-Seq AARS-COG4 AARS chr16 70254621 - COG4 chr16 70519731 - Exonic hg38 LUAD TCGA-44-2668-01A 1 4 In-Frame Intra-chr q22.1 q22.1 Seq+ 93332 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC18-RSPH10B TNRC18 chr7 5421060 - RSPH10B chr7 5928394 - Exonic hg38 LUAD TCGA-44-2668-01A 1 3 CDS-5'UTR Intra-chr p22.1 p22.1 93333 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA3-MIEN1 ITGA3 chr17 50056645 + MIEN1 chr17 39730291 - Exonic hg38 LUAD TCGA-44-3396-01A 52 152 In-Frame Intra-chr q21.33 q12 Seq+ 93334 ChimerSeq TCGA FAWG TCGA_RNA-Seq NME2-ACBD4 NME2 chr17 51166956 + ACBD4 chr17 45139021 + Exonic hg38 LUAD TCGA-44-3396-01A 6 29 In-Frame Intra-chr q21.33 Transcription factor q21.31 Seq+ 93335 ChimerSeq TCGA FAWG TCGA_RNA-Seq RECQL5-CCDC47 RECQL5 chr17 75628218 - CCDC47 chr17 63766194 - Exonic hg38 LUAD TCGA-44-3396-01A 1 7 CDS-5'UTR Intra-chr q25.1 q23.3 93336 ChimerSeq TCGA FAWG TCGA_RNA-Seq C10orf11-VCL C10orf11 chr10 75438494 + VCL chr10 74043083 + Exonic hg38 LUAD TCGA-44-3396-01A 1 5 Out-of-frame Intra-chr q22.2 Seq+ 93337 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAPSA-UQCRC2 NAPSA chr19 50365539 - UQCRC2 chr16 21962460 + Exonic hg38 LUAD TCGA-44-3398-01A 1 2 CDS-5'UTR Inter-chr q13.33 93338 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC6A9-EIF2B3 SLC6A9 chr1 44031306 - EIF2B3 chr1 44897444 - Exonic hg38 LUAD TCGA-44-3917-01A 4 8 5'UTR-CDS Intra-chr p34.1 p34.1 Seq+ 93339 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1328-QSER1 KIAA1328 chr18 36925042 + QSER1 chr11 32927157 + Exonic hg38 LUAD TCGA-44-3917-01A 3 4 5'UTR-CDS Inter-chr q12.2 p13 93340 ChimerSeq TCGA FAWG TCGA_RNA-Seq QSER1-KIAA1328 QSER1 chr11 32958086 + KIAA1328 chr18 36924912 + Exonic hg38 LUAD TCGA-44-3917-01A 1 7 CDS-5'UTR Inter-chr p13 q12.2 93341 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMK1D-ARL3 CAMK1D chr10 12791233 + ARL3 chr10 102705489 - Exonic hg38 LUAD TCGA-44-3917-01A 2 1 Out-of-frame Intra-chr p13 q24.32 Seq+ 93342 ChimerSeq TCGA FAWG TCGA_RNA-Seq IKZF1-PHF14 IKZF1 chr7 50327757 + PHF14 chr7 11111350 + Exonic hg38 LUAD TCGA-44-3917-01A 1 1 Out-of-frame Intra-chr p12.2 Oncogene Tumor suppressor gene Transcription factor p21.3 93343 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB12-PPP4R1 RAB12 chr18 8609953 + PPP4R1 chr18 9577191 - Exonic hg38 LUAD TCGA-44-3918-01A 5 14 Out-of-frame Intra-chr p11.22 p11.22 Seq+ 93344 ChimerSeq TCGA FAWG TCGA_RNA-Seq STRN3-PRKD1 STRN3 chr14 31025904 - PRKD1 chr14 29725674 - Exonic hg38 LUAD TCGA-44-3918-01A 4 6 In-Frame Intra-chr q12 q12 Seq+ 93345 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD9A-RBM14 RAD9A chr11 67330982 + RBM14 chr11 66619425 + Exonic hg38 LUAD TCGA-44-3918-01A 3 7 Out-of-frame Intra-chr q13.2 q13.2 Tumor suppressor gene 93346 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSK3B-TMEM31 GSK3B chr3 119876413 - TMEM31 chrX 103712236 + Exonic hg38 LUAD TCGA-44-3918-01A 4 2 CDS-5'UTR Inter-chr q13.33 CMGC:GSK Tumor suppressor gene q22.2 Seq+ 93347 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAPGEF5-TMEM8C RAPGEF5 chr7 22356830 - TMEM8C chr9 133520288 - Exonic hg38 LUAD TCGA-44-3918-01A 1 5 Out-of-frame Inter-chr p15.3 q34.2 Seq+ 93348 ChimerSeq TCGA FAWG TCGA_RNA-Seq PER3-GNAL PER3 chr1 7798673 + GNAL chr18 11862395 + Exonic hg38 LUAD TCGA-44-3918-01A 1 4 Out-of-frame Inter-chr p36.23 p11.21 Seq+ 93349 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF16B-RRBP1 KIF16B chr20 16526092 - RRBP1 chr20 17660528 - Exonic hg38 LUAD TCGA-44-3919-01A 4 5 CDS-5'UTR Intra-chr p12.1 p12.1 Seq+ 93350 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAPDH-NCAPD2 GAPDH chr12 6534861 + NCAPD2 chr12 6528173 + Exonic hg38 LUAD TCGA-44-4112-01A 2 174 In-Frame Intra-chr p13.31 p13.31 Seq+ 93351 ChimerSeq TCGA FAWG TCGA_RNA-Seq CIITA-VWA3A CIITA chr16 10879042 + VWA3A chr16 22140154 + Exonic hg38 LUAD TCGA-44-4112-01A 15 31 5'UTR-5'UTR Intra-chr p13.13 93352 ChimerSeq TCGA FAWG TCGA_RNA-Seq LONP2-C22orf39 LONP2 chr16 48303305 + C22orf39 chr22 19410778 - Exonic hg38 LUAD TCGA-44-4112-01A 3 19 CDS-3'UTR Inter-chr q12.1 q11.21 93353 ChimerSeq TCGA FAWG TCGA_RNA-Seq LONP2-HIRA LONP2 chr16 48303305 + HIRA chr22 19410778 - Exonic hg38 LUAD TCGA-44-4112-01A 3 19 In-Frame Inter-chr q12.1 q11.21 Tumor suppressor gene Seq+ 93354 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC42SE2-LYRM7 CDC42SE2 chr5 131264166 + LYRM7 chr5 131180095 + Exonic hg38 LUAD TCGA-44-4112-01A 4 2 5'UTR-5'UTR Intra-chr q31.1 q23.3 Seq+ 93355 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM267-PAIP1 TMEM267 chr5 43483822 - PAIP1 chr5 43555999 - Exonic hg38 LUAD TCGA-44-4112-01A 3 4 5'UTR-5'UTR Intra-chr p12 p12 93356 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS3-RSPH1 TMPRSS3 chr21 42375716 - RSPH1 chr21 42493079 - Exonic hg38 LUAD TCGA-44-4112-01A 2 3 In-Frame Intra-chr q22.3 q22.3 Seq+ 93357 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC23-CDC25C CDC23 chr5 138201107 - CDC25C chr5 138292116 - Exonic hg38 LUAD TCGA-44-4112-01A 1 3 In-Frame Intra-chr q31.2 q31.2 Seq+ 93358 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCYL1-FRMD8 SCYL1 chr11 65532805 + FRMD8 chr11 65404864 + Exonic hg38 LUAD TCGA-44-4112-01A 1 3 In-Frame Intra-chr q13.1 Other:SCY1 Tumor suppressor gene q13.1 Seq+ 93359 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPA2-TBCK PPA2 chr4 105473894 - TBCK chr4 106095641 - Exonic hg38 LUAD TCGA-44-5643-01A 3 18 Out-of-frame Intra-chr q24 q24 Other:TBCK Seq+ 93360 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPRD1B-CTNNBL1 RPRD1B chr20 38066256 + CTNNBL1 chr20 37765197 + Exonic hg38 LUAD TCGA-44-5644-01A 7 47 In-Frame Intra-chr q11.23 q11.23 Seq+ 93361 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC28-ODF1 TTC28 chr22 28629552 - ODF1 chr8 102560452 + Exonic hg38 LUAD TCGA-44-5644-01A 11 21 Out-of-frame Inter-chr q12.1 q22.3 Seq+ 93362 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-PSMD11 NF1 chr17 31169997 + PSMD11 chr17 32446945 + Exonic hg38 LUAD TCGA-44-5644-01A 12 14 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 93363 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSEN15-ACBD6 TSEN15 chr1 184051890 + ACBD6 chr1 180492365 - Exonic hg38 LUAD TCGA-44-5644-01A 3 24 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 93364 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNHG7-MCM6 SNHG7 chr9 136725055 - MCM6 chr2 135872843 - Exonic hg38 LUAD TCGA-44-5644-01A 4 16 3'UTR-CDS Inter-chr q34.3 q21.3 Seq+ 93365 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERC1-ZNF492 ERC1 chr12 1290012 + ZNF492 chr19 22663800 + Exonic hg38 LUAD TCGA-44-5644-01A 2 7 Out-of-frame Inter-chr p12 Transcription factor Seq+ 93366 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAPGEF5-CFDP1 RAPGEF5 chr7 22193367 - CFDP1 chr16 75305182 - Exonic hg38 LUAD TCGA-44-5645-01A 3 10 Out-of-frame Inter-chr p15.3 q23.1 Seq+ 93367 ChimerSeq TCGA FAWG TCGA_RNA-Seq VAC14-HYDIN VAC14 chr16 70800797 - HYDIN chr16 70879756 - Exonic hg38 LUAD TCGA-44-5645-01A 4 4 Out-of-frame Intra-chr q22.2 Seq+ 93368 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFTUD2-IGHJ4 EFTUD2 chr17 44853693 - IGHJ4 chr14 105864256 - Exonic hg38 LUAD TCGA-44-6145-01A 9 0 Out-of-frame Inter-chr q21.31 93369 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPSAP2-EEPD1 PRPSAP2 chr17 18872649 + EEPD1 chr7 36281115 + Exonic hg38 LUAD TCGA-44-6145-01A 1 11 Out-of-frame Inter-chr p11.2 p14.2 Seq+ 93370 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD30BP2-ACACA ANKRD30BP2 chr21 13060883 + ACACA chr17 37097984 - Exonic hg38 LUAD TCGA-44-6145-01A 1 4 5'UTR-5'UTR Inter-chr q11.2 Seq+ 93371 ChimerSeq TCGA FAWG TCGA_RNA-Seq MUC5AC-CAPN2 MUC5AC chr11 1193659 + CAPN2 chr1 223766367 + Exonic hg38 LUAD TCGA-44-6146-01A 1 7 3'UTR-CDS Inter-chr q41 93372 ChimerSeq TCGA FAWG TCGA_RNA-Seq FKTN-TMEM38B FKTN chr9 105604492 + TMEM38B chr9 105773865 + Exonic hg38 LUAD TCGA-44-6146-01A 1 4 Out-of-frame Intra-chr q31.2 q31.2 93373 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMDT1-NFAM1 SMDT1 chr22 42079954 + NFAM1 chr22 42387078 - Exonic hg38 LUAD TCGA-44-6147-01A 3 7 3'UTR-CDS Intra-chr q13.2 93374 ChimerSeq TCGA FAWG TCGA_RNA-Seq AK6-ADAMTS6 AK6 chr5 69366503 - ADAMTS6 chr5 65329483 - Exonic hg38 LUAD TCGA-44-6147-01A 1 6 5'UTR-CDS Intra-chr q12.3 93375 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF9-ADAMTS6 TAF9 chr5 69366503 - ADAMTS6 chr5 65329483 - Exonic hg38 LUAD TCGA-44-6147-01A 1 6 5'UTR-CDS Intra-chr q12.3 Seq+ 93376 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPECC1L-BCL2L13 SPECC1L chr22 24270983 + BCL2L13 chr22 17696141 + Exonic hg38 LUAD TCGA-44-6774-01A 1 8 5'UTR-5'UTR Intra-chr q11.23 q11.21 Seq+ 93377 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPARC-CTSD SPARC chr5 151671573 - CTSD chr11 1753880 - Exonic hg38 LUAD TCGA-44-6774-01A 1 5 In-Frame Inter-chr q33.1 Tumor suppressor gene p15.5 93378 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-BASP1 PVT1 chr8 128010444 + BASP1 chr5 17275208 + Exonic hg38 LUAD TCGA-44-6774-01A 1 3 5'UTR-5'UTR Inter-chr q24.21 p15.1 Tumor suppressor gene 93379 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK3-CPQ STK3 chr8 98596032 - CPQ chr8 96784864 + Exonic hg38 LUAD TCGA-44-6775-01A 1 11 CDS-5'UTR Intra-chr q22.2 q22.1 Seq+ 93380 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF3G-SFTPB EIF3G chr19 10118668 - SFTPB chr2 85659682 - Exonic hg38 LUAD TCGA-44-6776-01A 1 5 CDS-3'UTR Inter-chr p13.2 p11.2 93381 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC45-GNB1 LRRC45 chr17 82029185 + GNB1 chr1 1817875 - Exonic hg38 LUAD TCGA-44-6778-01A 10 29 In-Frame Inter-chr q25.3 p36.33 Seq+ 93382 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHD1-BATF2 EHD1 chr11 64874421 - BATF2 chr11 64989812 - Exonic hg38 LUAD TCGA-44-6778-01A 4 23 Out-of-frame Intra-chr q13.1 q13.1 Tumor suppressor gene Transcription factor Seq+ 93383 ChimerSeq TCGA FAWG TCGA_RNA-Seq ULK4-ANO10 ULK4 chr3 41883874 - ANO10 chr3 43366974 - Exonic hg38 LUAD TCGA-44-6778-01A 2 11 In-Frame Intra-chr p22.1 Other:ULK p21.33 Seq+ 93384 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBXN4-R3HDM1 UBXN4 chr2 135780385 + R3HDM1 chr2 135602500 + Exonic hg38 LUAD TCGA-44-6778-01A 2 5 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 93385 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC6B-FAM19A5 TNRC6B chr22 40156182 + FAM19A5 chr22 48749839 + Exonic hg38 LUAD TCGA-44-7659-01A 2 7 Out-of-frame Intra-chr q13.1 q13.32 Seq+ 93386 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC6B-ZC3H7B TNRC6B chr22 40044998 + ZC3H7B chr22 41355469 + Exonic hg38 LUAD TCGA-44-7659-01A 2 3 5'UTR-CDS Intra-chr q13.1 q13.2 Seq+ 93387 ChimerSeq TCGA FAWG TCGA_RNA-Seq MORF4L2-GLRA4 MORF4L2 chrX 103678499 - GLRA4 chrX 103719271 - Exonic hg38 LUAD TCGA-44-7660-01A 58 289 5'UTR-CDS Intra-chr q22.2 q22.2 Seq+ 93388 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1E-BNIP2 MYO1E chr15 59372498 - BNIP2 chr15 59671314 - Exonic hg38 LUAD TCGA-44-7660-01A 34 186 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 93389 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB14-STOM RAB14 chr9 121201639 - STOM chr9 121349323 - Exonic hg38 LUAD TCGA-44-7660-01A 9 12 5'UTR-CDS Intra-chr q33.2 q33.2 Seq+ 93390 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARRB1-KLHL35 ARRB1 chr11 75351588 - KLHL35 chr11 75426638 - Exonic hg38 LUAD TCGA-44-7660-01A 2 20 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 93391 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF6-PCP4L1 ATF6 chr1 161802272 + PCP4L1 chr1 161283668 + Exonic hg38 LUAD TCGA-44-7660-01A 4 9 In-Frame Intra-chr q23.3 Transcription factor q23.3 Seq+ 93392 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACVR1-CCDC148 ACVR1 chr2 157818385 - CCDC148 chr2 158178996 - Exonic hg38 LUAD TCGA-44-7660-01A 4 7 5'UTR-CDS Intra-chr q24.1 q24.1 Seq+ 93393 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMC6-DNAH17 TMC6 chr17 78123989 - DNAH17 chr17 78500461 - Exonic hg38 LUAD TCGA-44-7660-01A 5 3 In-Frame Intra-chr q25.3 q25.3 Seq+ 93394 ChimerSeq TCGA FAWG TCGA_RNA-Seq G3BP2-NAAA G3BP2 chr4 75673208 - NAAA chr4 75919975 - Exonic hg38 LUAD TCGA-44-7660-01A 2 11 5'UTR-CDS Intra-chr q21.1 q21.1 Seq+ 93395 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D22A-RIBC2 TBC1D22A chr22 46894846 + RIBC2 chr22 45430900 + Exonic hg38 LUAD TCGA-44-7660-01A 2 9 In-Frame Intra-chr q13.31 q13.31 Seq+ 93396 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1E-GTF2A2 MYO1E chr15 59372498 - GTF2A2 chr15 59642262 - Exonic hg38 LUAD TCGA-44-7660-01A 1 12 In-Frame Intra-chr q22.2 q22.2 93397 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2B3-ZBTB5 EIF2B3 chr1 44978315 - ZBTB5 chr9 37442555 - Exonic hg38 LUAD TCGA-44-7660-01A 1 11 CDS-5'UTR Inter-chr p34.1 p13.2 Transcription factor 93398 ChimerSeq TCGA FAWG TCGA_RNA-Seq SZT2-EIF2B3 SZT2 chr1 43432439 + EIF2B3 chr1 44981177 - Exonic hg38 LUAD TCGA-44-7660-01A 2 7 CDS-5'UTR Intra-chr p34.2 p34.1 Seq+ 93399 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTSC-GRM5 CTSC chr11 88334937 - GRM5 chr11 88509504 - Exonic hg38 LUAD TCGA-44-7660-01A 1 7 Out-of-frame Intra-chr q14.2 q14.3 93400 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM168A-C2CD3 FAM168A chr11 73468405 - C2CD3 chr11 74085886 - Exonic hg38 LUAD TCGA-44-7660-01A 1 4 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 93401 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMHD1-SCAND1 SAMHD1 chr20 36951615 - SCAND1 chr20 35955096 - Exonic hg38 LUAD TCGA-44-7661-01A 4 11 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 93402 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBL1-FER1L4 RBL1 chr20 37088989 - FER1L4 chr20 35584093 - Exonic hg38 LUAD TCGA-44-7661-01A 2 7 CDS-3'UTR Intra-chr q11.23 Tumor suppressor gene q11.22 Tumor suppressor gene 93403 ChimerSeq TCGA FAWG TCGA_RNA-Seq MET-WNT2 MET chr7 116777469 + WNT2 chr7 117297876 - Exonic hg38 LUAD TCGA-44-7662-01A 128 460 Out-of-frame Intra-chr q31.2 TK:Met Oncogene q31.2 Seq+ 93404 ChimerSeq TCGA FAWG TCGA_RNA-Seq SF3B3-CDH15 SF3B3 chr16 70544533 + CDH15 chr16 89179416 + Exonic hg38 LUAD TCGA-44-7667-01A 68 190 In-Frame Intra-chr q22.1 q24.3 Seq+ 93405 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC14A2-ABHD3 SLC14A2 chr18 45213191 + ABHD3 chr18 21664230 - Exonic hg38 LUAD TCGA-44-7667-01A 32 124 5'UTR-CDS Intra-chr q12.3 q11.2 Seq+ 93406 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2F2-CTIF GTF2F2 chr13 45207505 + CTIF chr18 48757919 + Exonic hg38 LUAD TCGA-44-7667-01A 10 49 CDS-3'UTR Inter-chr q14.12 Seq+ 93407 ChimerSeq TCGA FAWG TCGA_RNA-Seq TGIF1-DDX19B TGIF1 chr18 3447797 + DDX19B chr16 70314902 + Exonic hg38 LUAD TCGA-44-7667-01A 9 53 In-Frame Inter-chr p11.31 Transcription factor q22.1 Seq+ 93408 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTIF-SDHAF4 CTIF chr18 48761689 + SDHAF4 chr6 70588615 + Exonic hg38 LUAD TCGA-44-7667-01A 3 17 3'UTR-CDS Inter-chr q13 93409 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAI14-CLPTM1L RAI14 chr5 34656475 + CLPTM1L chr5 1341860 - Exonic hg38 LUAD TCGA-44-7667-01A 1 7 5'UTR-3'UTR Intra-chr p13.2 p15.33 93410 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC7A5-WWP2 SLC7A5 chr16 87868885 - WWP2 chr16 69786996 + Exonic hg38 LUAD TCGA-44-7667-01A 1 3 CDS-5'UTR Intra-chr q24.2 q22.1 93411 ChimerSeq TCGA FAWG TCGA_RNA-Seq SF3B3-CDH3 SF3B3 chr16 70544533 + CDH3 chr16 89179416 + Exonic hg38 LUAD TCGA-44-7667-01A 1000 1000 CDS-3'UTR Intra-chr q22.1 q22.1 93412 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXN3-SLC25A21 FOXN3 chr14 89190384 - SLC25A21 chr14 36875004 - Exonic hg38 LUAD TCGA-44-7669-01A 5 65 In-Frame Intra-chr q32.11 Transcription factor q13.3 Seq+ 93413 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH2-LAMA3 CDH2 chr18 28147673 - LAMA3 chr18 23813057 + Exonic hg38 LUAD TCGA-44-7669-01A 5 60 In-Frame Intra-chr q12.1 Oncogene q11.2 Seq+ 93414 ChimerSeq TCGA FAWG TCGA_RNA-Seq SARNP-PTMS SARNP chr12 55789075 - PTMS chr12 6769603 + Exonic hg38 LUAD TCGA-44-7669-01A 6 41 In-Frame Intra-chr q13.2 p13.31 Seq+ 93415 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERC1-APOLD1 ERC1 chr12 991322 + APOLD1 chr12 12812261 + Exonic hg38 LUAD TCGA-44-7669-01A 1 12 5'UTR-3'UTR Intra-chr p13.1 93416 ChimerSeq TCGA FAWG TCGA_RNA-Seq APLP2-SPCS2 APLP2 chr11 130127840 + SPCS2 chr11 74965034 + Exonic hg38 LUAD TCGA-44-7669-01A 2 2 In-Frame Intra-chr q24.3 q13.4 Seq+ 93417 ChimerSeq TCGA FAWG TCGA_RNA-Seq SART3-CORO1C SART3 chr12 108535359 - CORO1C chr12 108649020 - Exonic hg38 LUAD TCGA-44-7669-01A 2 1 In-Frame Intra-chr q23.3 q24.11 Seq+ 93418 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASXL2-SRBD1 ASXL2 chr2 25878166 - SRBD1 chr2 45488331 - Exonic hg38 LUAD TCGA-44-7670-01A 26 93 Out-of-frame Intra-chr p23.3 p21 Seq+ 93419 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPNE8-CADM2 CPNE8 chr12 38905437 - CADM2 chr3 85802047 + Exonic hg38 LUAD TCGA-44-7670-01A 16 74 Out-of-frame Inter-chr q12 p12.1 Tumor suppressor gene Seq+ 93420 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCMH1-CUL3 SCMH1 chr1 41242059 - CUL3 chr2 224478345 - Exonic hg38 LUAD TCGA-44-7670-01A 9 64 5'UTR-CDS Inter-chr p34.2 Transcription factor q36.2 Seq+ 93421 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD6-SCFD1 FRMD6 chr14 51651996 + SCFD1 chr14 30694773 + Exonic hg38 LUAD TCGA-44-7670-01A 9 50 5'UTR-CDS Intra-chr q22.1 q12 Seq+ 93422 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK6-STXBP6 CDK6 chr7 92833091 - STXBP6 chr14 24812732 - Exonic hg38 LUAD TCGA-44-7670-01A 6 29 Out-of-frame Inter-chr q21.2 CMGC:CDK Oncogene Tumor suppressor gene q12 Seq+ 93423 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM53B-KCNN1 FAM53B chr10 124681607 - KCNN1 chr19 17988415 + Exonic hg38 LUAD TCGA-44-7670-01A 4 35 In-Frame Inter-chr q26.13 p13.11 Seq+ 93424 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM133B-CDK6 FAM133B chr7 92590268 - CDK6 chr7 92833690 - Exonic hg38 LUAD TCGA-44-7670-01A 1 23 5'UTR-5'UTR Intra-chr q21.2 q21.2 CMGC:CDK Oncogene Tumor suppressor gene KB Pub Seq+ 93425 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHACTR1-BCL11A PHACTR1 chr6 12749790 + BCL11A chr2 60452666 - Exonic hg38 LUAD TCGA-44-7670-01A 1 22 In-Frame Inter-chr p16.1 Oncogene Transcription factor Seq+ 93426 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF638-PHACTR1 ZNF638 chr2 71276754 + PHACTR1 chr6 13160204 + Exonic hg38 LUAD TCGA-44-7670-01A 4 10 5'UTR-CDS Inter-chr p13.3 Seq+ 93427 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKN2A-FOCAD CDKN2A chr9 21994139 - FOCAD chr9 20881871 + Exonic hg38 LUAD TCGA-44-7670-01A 1 17 In-Frame Intra-chr p21.3 Oncogene Tumor suppressor gene p21.3 93428 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYMPK-MAP3K13 SYMPK chr19 45822756 - MAP3K13 chr3 185437447 + Exonic hg38 LUAD TCGA-44-7670-01A 1 6 In-Frame Inter-chr q13.32 q27.2 93429 ChimerSeq TCGA FAWG TCGA_RNA-Seq BICD1-CDK6 BICD1 chr12 32107544 + CDK6 chr7 92618207 - Exonic hg38 LUAD TCGA-44-7670-01A 1 4 Out-of-frame Inter-chr p11.21 q21.2 CMGC:CDK Oncogene Tumor suppressor gene Seq+ 93430 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAG16-CACHD1 SPAG16 chr2 213297357 + CACHD1 chr1 64550594 + Exonic hg38 LUAD TCGA-44-7670-01A 1 4 In-Frame Inter-chr q34 p31.3 93431 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNTA-KMT2C FNTA chr8 43083180 + KMT2C chr7 152273867 - Exonic hg38 LUAD TCGA-44-7670-01A 1 2 Out-of-frame Inter-chr p11.21 q36.1 Oncogene Tumor suppressor gene 93432 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPINT2-CYP2B7P SPINT2 chr19 38264998 + CYP2B7P chr19 40944331 + Exonic hg38 LUAD TCGA-44-7671-01A 2 7 CDS-5'UTR Intra-chr q13.2 Tumor suppressor gene q13.2 93433 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCC6-LTA4H ABCC6 chr16 16182412 - LTA4H chr12 96003920 - Exonic hg38 LUAD TCGA-44-7672-01A 2 7 5'UTR-CDS Inter-chr q23.1 Seq+ 93434 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-LIPI CCDC6 chr10 59852553 - LIPI chr21 14109080 - Exonic hg38 LUAD TCGA-44-8117-01A 8 127 Out-of-frame Inter-chr q21.2 q11.2 Seq+ 93435 ChimerSeq TCGA FAWG TCGA_RNA-Seq UQCRC1-SMARCC1 UQCRC1 chr3 48609162 - SMARCC1 chr3 47590837 - Exonic hg38 LUAD TCGA-44-8117-01A 8 44 Out-of-frame Intra-chr p21.31 p21.31 Tumor suppressor gene Seq+ 93436 ChimerSeq TCGA FAWG TCGA_RNA-Seq JARID2-HSD3B1 JARID2 chr6 15246584 + HSD3B1 chr1 119507392 + Exonic hg38 LUAD TCGA-44-8117-01A 3 11 CDS-5'UTR Inter-chr p22.3 p12 Seq+ 93437 ChimerSeq TCGA FAWG TCGA_RNA-Seq C22orf39-ADAM2 C22orf39 chr22 19405786 - ADAM2 chr8 39769575 - Exonic hg38 LUAD TCGA-44-8117-01A 2 13 3'UTR-5'UTR Inter-chr q11.21 93438 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIRA-ADAM2 HIRA chr22 19405786 - ADAM2 chr8 39769575 - Exonic hg38 LUAD TCGA-44-8117-01A 2 13 CDS-5'UTR Inter-chr q11.21 Tumor suppressor gene Seq+ 93439 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFCAB2-FKBP3 EFCAB2 chr1 245059458 + FKBP3 chr14 45130800 - Exonic hg38 LUAD TCGA-44-8117-01A 3 2 In-Frame Inter-chr q44 q21.2 Seq+ 93440 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP170-RGS7 CEP170 chr1 243221724 - RGS7 chr1 240827172 - Exonic hg38 LUAD TCGA-44-8119-01A 5 12 5'UTR-CDS Intra-chr q43 Seq+ 93441 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHC2-CREB3L3 SHC2 chr19 460529 - CREB3L3 chr19 4164503 + Exonic hg38 LUAD TCGA-44-8119-01A 1 5 In-Frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 93442 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN7L1-AGBL3 ATXN7L1 chr7 105875812 - AGBL3 chr7 135134841 + Exonic hg38 LUAD TCGA-44-A479-01A 16 18 In-Frame Intra-chr q22.3 q33 Seq+ 93443 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX6-MIPOL1 SNX6 chr14 34575756 - MIPOL1 chr14 37422855 + Exonic hg38 LUAD TCGA-44-A479-01A 3 10 In-Frame Intra-chr q13.1 q13.3 Seq+ 93444 ChimerSeq TCGA FAWG TCGA_RNA-Seq EVA1C-MROH8 EVA1C chr21 32413013 + MROH8 chr20 37115337 - Exonic hg38 LUAD TCGA-44-A479-01A 4 5 Out-of-frame Inter-chr q22.11 q11.23 Seq+ 93445 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1324L-ABCA13 KIAA1324L chr7 86918442 - ABCA13 chr7 48268980 + Exonic hg38 LUAD TCGA-44-A479-01A 2 4 Out-of-frame Intra-chr q21.12 p12.3 Seq+ 93446 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM24-KIAA1324L TRIM24 chr7 138460912 + KIAA1324L chr7 86947922 - Exonic hg38 LUAD TCGA-44-A479-01A 2 3 In-Frame Intra-chr q33 Oncogene Tumor suppressor gene q21.12 Seq+ 93447 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLGAP4-BPI DLGAP4 chr20 36500611 + BPI chr20 38288716 + Exonic hg38 LUAD TCGA-44-A47B-01A 33 157 CDS-5'UTR Intra-chr q11.23 q11.23 Seq+ 93448 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM5A-RAE1 KDM5A chr12 350621 - RAE1 chr20 57365356 + Exonic hg38 LUAD TCGA-44-A47B-01A 28 65 In-Frame Inter-chr p13.33 Tumor suppressor gene q13.31 Seq+ 93449 ChimerSeq TCGA FAWG TCGA_RNA-Seq WSB1-FN3KRP WSB1 chr17 27294435 + FN3KRP chr17 82718906 + Exonic hg38 LUAD TCGA-44-A47B-01A 13 43 Out-of-frame Intra-chr q11.1 q25.3 Seq+ 93450 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM9SF4-EYA2 TM9SF4 chr20 32160111 + EYA2 chr20 46990001 + Exonic hg38 LUAD TCGA-44-A47B-01A 4 21 CDS-5'UTR Intra-chr q11.21 q13.12 Seq+ 93451 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPOP-PECAM1 SPOP chr17 49677933 - PECAM1 chr17 64390763 - Exonic hg38 LUAD TCGA-44-A47B-01A 5 10 5'UTR-5'UTR Intra-chr q21.33 Oncogene Tumor suppressor gene q23.3 93452 ChimerSeq TCGA FAWG TCGA_RNA-Seq HEBP1-ZBTB46 HEBP1 chr12 12987152 - ZBTB46 chr20 63747301 - Exonic hg38 LUAD TCGA-44-A47B-01A 4 8 Out-of-frame Inter-chr p13.1 q13.33 Transcription factor Seq+ 93453 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYTH1-KSR1 CYTH1 chr17 78736692 - KSR1 chr17 27550568 + Exonic hg38 LUAD TCGA-44-A47B-01A 1 7 Out-of-frame Intra-chr q25.3 q11.2 TKL:RAF Seq+ 93454 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK1-GATA6 ROCK1 chr18 21110818 - GATA6 chr18 22200656 + Exonic hg38 LUAD TCGA-44-A47G-01A 3 8 In-Frame Intra-chr q11.1 AGC:DMPK q11.2 Transcription factor Seq+ 93455 ChimerSeq TCGA FAWG TCGA_RNA-Seq YY1-CCNK YY1 chr14 100239923 + CCNK chr14 99502207 + Exonic hg38 LUAD TCGA-44-A47G-01A 3 8 Out-of-frame Intra-chr q32.2 Transcription factor q32.2 Seq+ 93456 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLLT6-LASP1 MLLT6 chr17 38705741 + LASP1 chr17 38890420 + Exonic hg38 LUAD TCGA-44-A4SS-01A 26 130 3'UTR-CDS Intra-chr q12 q12 Seq+ 93457 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGAV-PDE11A ITGAV chr2 186590523 + PDE11A chr2 177905187 - Exonic hg38 LUAD TCGA-44-A4SS-01A 2 17 Out-of-frame Intra-chr q32.1 Tumor suppressor gene q31.2 Seq+ 93458 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST14-ERBB2 ST14 chr11 130189896 + ERBB2 chr17 39717320 + Exonic hg38 LUAD TCGA-44-A4SS-01A 1 2 Out-of-frame Inter-chr q24.3 q12 Oncogene 93459 ChimerSeq TCGA FAWG TCGA_RNA-Seq FXYD5-FXYD3 FXYD5 chr19 35157501 + FXYD3 chr19 35116264 + Exonic hg38 LUAD TCGA-44-A4SU-01A 4 5 5'UTR-5'UTR Intra-chr q13.12 q13.12 93460 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARAP1-FADD ARAP1 chr11 72701649 - FADD chr11 70206133 + Exonic hg38 LUAD TCGA-44-A4SU-01A 2 12 In-Frame Intra-chr q13.4 q13.3 Tumor suppressor gene Seq+ 93461 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4B-AKAP8L KDM4B chr19 5144902 + AKAP8L chr19 15380612 - Exonic hg38 LUAD TCGA-49-4486-01A 29 124 In-Frame Intra-chr p13.3 p13.12 Transcription factor Seq+ 93462 ChimerSeq TCGA FAWG TCGA_RNA-Seq CIC-COQ8B CIC chr19 42272452 + COQ8B chr19 40693037 - Exonic hg38 LUAD TCGA-49-4486-01A 23 109 Out-of-frame Intra-chr q13.2 Oncogene Tumor suppressor gene Transcription factor q13.2 93463 ChimerSeq TCGA FAWG TCGA_RNA-Seq COQ8B-AKAP8 COQ8B chr19 40695989 - AKAP8 chr19 15359062 - Exonic hg38 LUAD TCGA-49-4486-01A 19 77 In-Frame Intra-chr q13.2 p13.12 Transcription factor 93464 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATOH8-VAMP5 ATOH8 chr2 85764182 + VAMP5 chr2 85591725 + Exonic hg38 LUAD TCGA-49-4487-01A 5 23 In-Frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 93465 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAG2-RNF114 BAG2 chr6 57172810 + RNF114 chr20 49949248 + Exonic hg38 LUAD TCGA-49-4487-01A 2 19 Out-of-frame Inter-chr p12.1 q13.13 Seq+ 93466 ChimerSeq TCGA FAWG TCGA_RNA-Seq CARMIL1-SLC17A1 CARMIL1 chr6 25284909 + SLC17A1 chr6 25819915 - Exonic hg38 LUAD TCGA-49-4487-01A 2 3 In-Frame Intra-chr p22.2 p22.2 93467 ChimerSeq TCGA FAWG TCGA_RNA-Seq WASH3P-PPP1R13L WASH3P chr15 101966223 + PPP1R13L chr19 45380228 - Exonic hg38 LUAD TCGA-49-4487-01A 1 7 5'UTR-CDS Inter-chr q26.3 q13.32 93468 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPATA2-GSTA5 SPATA2 chr20 49915380 - GSTA5 chr6 52832990 - Exonic hg38 LUAD TCGA-49-4487-01A 2 2 5'UTR-CDS Inter-chr q13.13 p12.2 Seq+ 93469 ChimerSeq TCGA FAWG TCGA_RNA-Seq COX6B1-TTYH1 COX6B1 chr19 35651349 + TTYH1 chr19 54426673 + Exonic hg38 LUAD TCGA-49-4488-01A 3 27 CDS-3'UTR Intra-chr q13.12 Seq+ 93470 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2B-CEACAM16 KMT2B chr19 35737263 + CEACAM16 chr19 44710496 + Exonic hg38 LUAD TCGA-49-4488-01A 5 10 Out-of-frame Intra-chr q13.12 Oncogene Transcription factor q13.31 93471 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMP5-COL21A1 BMP5 chr6 55874376 - COL21A1 chr6 56101525 - Exonic hg38 LUAD TCGA-49-4488-01A 1 6 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 93472 ChimerSeq TCGA FAWG TCGA_RNA-Seq LARP4B-IDI2 LARP4B chr10 836405 - IDI2 chr10 1025859 - Exonic hg38 LUAD TCGA-49-4488-01A 1000 1000 CDS-5'UTR Intra-chr p15.3 p15.3 93473 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELL-MVB12A ELL chr19 18521921 - MVB12A chr19 17406077 + Exonic hg38 LUAD TCGA-49-4490-01A 1 7 CDS-5'UTR Intra-chr p13.11 p13.11 93474 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAGI1-PARD6G MAGI1 chr3 65621972 - PARD6G chr18 80202932 - Exonic hg38 LUAD TCGA-49-4490-01A 2 1 Out-of-frame Inter-chr Oncogene q23 Seq+ 93475 ChimerSeq TCGA FAWG TCGA_RNA-Seq RGS22-NIPAL2 RGS22 chr8 100047463 - NIPAL2 chr8 98254087 - Exonic hg38 LUAD TCGA-49-4490-01A 1 3 Out-of-frame Intra-chr q22.2 q22.2 93476 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCU-CNNM2 MCU chr10 72715902 + CNNM2 chr10 102927345 + Exonic hg38 LUAD TCGA-49-4494-01A 4 8 5'UTR-CDS Intra-chr q22.1 q24.32 Seq+ 93477 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-BANF1 SHANK2 chr11 71224697 - BANF1 chr11 66003626 + Exonic hg38 LUAD TCGA-49-4494-01A 3 9 5'UTR-CDS Intra-chr q13.4 q13.1 Seq+ 93478 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNTN1-TSPAN8 CNTN1 chr12 40692592 + TSPAN8 chr12 71282819 - Exonic hg38 LUAD TCGA-49-4501-01A 9 249 5'UTR-5'UTR Intra-chr q12 q21.1 Seq+ 93479 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD6-CNBD2 CHD6 chr20 41618340 - CNBD2 chr20 35972629 + Exonic hg38 LUAD TCGA-49-4501-01A 5 7 5'UTR-5'UTR Intra-chr q12 q11.23 Seq+ 93480 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC2A13-RAB3IP SLC2A13 chr12 39830103 - RAB3IP chr12 69815364 + Exonic hg38 LUAD TCGA-49-4501-01A 2 16 Out-of-frame Intra-chr q12 q15 Seq+ 93481 ChimerSeq TCGA FAWG TCGA_RNA-Seq ECE1-PCP4 ECE1 chr1 21244989 - PCP4 chr21 39898476 + Exonic hg38 LUAD TCGA-49-4501-01A 1 11 In-Frame Inter-chr p36.12 q22.2 93482 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRK2-CCT2 LRRK2 chr12 40287539 + CCT2 chr12 69592059 + Exonic hg38 LUAD TCGA-49-4501-01A 2 4 In-Frame Intra-chr q12 TKL:LRRK q15 Seq+ 93483 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHBDL2-PABPC4 RHBDL2 chr1 38941682 - PABPC4 chr1 39564542 - Exonic hg38 LUAD TCGA-49-4501-01A 1 7 5'UTR-CDS Intra-chr p34.3 p34.3 93484 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTL-AGBL4 DTL chr1 212047417 + AGBL4 chr1 49851518 - Exonic hg38 LUAD TCGA-49-4501-01A 1 3 In-Frame Intra-chr q32.3 p33 Seq+ 93485 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMC5-SYT17 TMC5 chr16 19430640 + SYT17 chr16 19223045 + Exonic hg38 LUAD TCGA-49-4501-01A 1 3 5'UTR-CDS Intra-chr p12.3 p12.3 93486 ChimerSeq TCGA FAWG TCGA_RNA-Seq WFDC3-NEURL2 WFDC3 chr20 45758392 - NEURL2 chr20 45888873 - Exonic hg38 LUAD TCGA-49-4505-01A 135 407 3'UTR-CDS Intra-chr q13.12 q13.12 93487 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF130-RASGEF1C RNF130 chr5 180071456 - RASGEF1C chr5 180111580 - Exonic hg38 LUAD TCGA-49-4505-01A 5 10 Out-of-frame Intra-chr q35.3 q35.3 Seq+ 93488 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBBP5-DSTYK RBBP5 chr1 205114789 - DSTYK chr1 205150794 - Exonic hg38 LUAD TCGA-49-4506-01A 1 15 Out-of-frame Intra-chr q32.1 q32.1 93489 ChimerSeq TCGA FAWG TCGA_RNA-Seq THRAP3-CAPZB THRAP3 chr1 36224505 + CAPZB chr1 19378653 - Exonic hg38 LUAD TCGA-49-4507-01A 89 314 5'UTR-CDS Intra-chr p34.3 p36.13 Seq+ 93490 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHID1-RRBP1 CHID1 chr11 910775 - RRBP1 chr20 17629961 - Exonic hg38 LUAD TCGA-49-4512-01A 4 2 5'UTR-CDS Inter-chr p15.5 p12.1 Seq+ 93491 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRBP1-CHID1 RRBP1 chr20 17633460 - CHID1 chr11 893519 - Exonic hg38 LUAD TCGA-49-4512-01A 1 11 Out-of-frame Inter-chr p12.1 p15.5 Seq+ 93492 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALY-CDK5RAP1 RALY chr20 34031604 + CDK5RAP1 chr20 33359123 - Exonic hg38 LUAD TCGA-49-4512-01A 2 1 5'UTR-CDS Intra-chr q11.22 q11.21 Seq+ 93493 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPN13-GALNT14 CAPN13 chr2 30787128 - GALNT14 chr2 30932194 - Exonic hg38 LUAD TCGA-49-4514-01A 4 10 Out-of-frame Intra-chr p23.1 p23.1 Seq+ 93494 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIT1-CCT3 RIT1 chr1 155910450 - CCT3 chr1 156312221 - Exonic hg38 LUAD TCGA-49-4514-01A 4 10 Out-of-frame Intra-chr q22 q22 Seq+ 93495 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFT122-HMCES IFT122 chr3 129488397 + HMCES chr3 129298354 + Exonic hg38 LUAD TCGA-49-4514-01A 1 3 In-Frame Intra-chr q21.3 q21.3 93496 ChimerSeq TCGA FAWG TCGA_RNA-Seq YARS-ST3GAL3 YARS chr1 32806482 - ST3GAL3 chr1 43814891 + Exonic hg38 LUAD TCGA-49-4514-01A 1 3 Out-of-frame Intra-chr p35.1 p34.1 93497 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCHS2-FGG DCHS2 chr4 154489304 - FGG chr4 154612201 - Exonic hg38 LUAD TCGA-49-6743-01A 45 359 5'UTR-CDS Intra-chr q32.1 Seq+ 93498 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC97-GTF2A2 CCDC97 chr19 41310356 + GTF2A2 chr15 59652326 - Exonic hg38 LUAD TCGA-49-6743-01A 30 226 CDS-5'UTR Inter-chr q13.2 q22.2 Seq+ 93499 ChimerSeq TCGA FAWG TCGA_RNA-Seq REL-MVP REL chr2 60917017 + MVP chr16 29835704 + Exonic hg38 LUAD TCGA-49-6743-01A 47 134 In-Frame Inter-chr p16.1 Oncogene Transcription factor p11.2 Seq+ 93500 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN7L1-EFCAB10 ATXN7L1 chr7 105788604 - EFCAB10 chr7 105569571 - Exonic hg38 LUAD TCGA-49-6743-01A 2 10 In-Frame Intra-chr q22.3 q22.3 93501 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS1-CYP24A1 BCAS1 chr20 54058085 - CYP24A1 chr20 54171670 - Exonic hg38 LUAD TCGA-49-6743-01A 1 6 Out-of-frame Intra-chr q13.2 q13.2 93502 ChimerSeq TCGA FAWG TCGA_RNA-Seq TARBP1-TOMM20 TARBP1 chr1 234460261 - TOMM20 chr1 235113910 - Exonic hg38 LUAD TCGA-49-6743-01A 1 1 Out-of-frame Intra-chr q42.2 q42.3 93503 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARD3B-WWOX PARD3B chr2 205125737 + WWOX chr16 79211608 + Exonic hg38 LUAD TCGA-49-6744-01A 8 8 In-Frame Inter-chr q33.3 q23.1 Tumor suppressor gene Seq+ 93504 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAZ2A-BIN2 BAZ2A chr12 56630125 - BIN2 chr12 51292344 - Exonic hg38 LUAD TCGA-49-6745-01A 25 74 5'UTR-CDS Intra-chr q13.3 Transcription factor q13.13 Seq+ 93505 ChimerSeq TCGA FAWG TCGA_RNA-Seq USF2-CLASRP USF2 chr19 35271141 + CLASRP chr19 45053098 + Exonic hg38 LUAD TCGA-49-AAQV-01A 15 48 Out-of-frame Intra-chr q13.12 Transcription factor q13.32 Seq+ 93506 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAP1L1-SLCO1B1 NAP1L1 chr12 76084567 - SLCO1B1 chr12 21141514 + Exonic hg38 LUAD TCGA-49-AAQV-01A 2 22 5'UTR-5'UTR Intra-chr q21.2 p12.1 Seq+ 93507 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNC45A-BLM UNC45A chr15 90940473 + BLM chr15 90815102 + Exonic hg38 LUAD TCGA-49-AAQV-01A 1 2 Out-of-frame Intra-chr q26.1 q26.1 Oncogene Tumor suppressor gene Seq+ 93508 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF1-SLC26A5 SMURF1 chr7 99121146 - SLC26A5 chr7 103352926 - Exonic hg38 LUAD TCGA-49-AAR0-01A 8 33 CDS-3'UTR Intra-chr q22.1 Seq+ 93509 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2IRD1-ZAN GTF2IRD1 chr7 74538760 + ZAN chr7 100791966 + Exonic hg38 LUAD TCGA-49-AAR0-01A 8 7 Out-of-frame Intra-chr q11.23 Transcription factor q22.1 Seq+ 93510 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF1-DNAJC2 SMURF1 chr7 99143726 - DNAJC2 chr7 103341954 - Exonic hg38 LUAD TCGA-49-AAR0-01A 4 21 In-Frame Intra-chr q22.1 Seq+ 93511 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE3C-GBX1 UBE3C chr7 157207935 + GBX1 chr7 151150021 - Exonic hg38 LUAD TCGA-49-AAR0-01A 1 7 Out-of-frame Intra-chr q36.3 q36.1 Transcription factor Seq+ 93512 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPF18-CCDC3 PRPF18 chr10 13587152 + CCDC3 chr10 12898679 - Exonic hg38 LUAD TCGA-49-AAR0-01A 1 3 In-Frame Intra-chr p13 p13 Seq+ 93513 ChimerSeq TCGA FAWG TCGA_RNA-Seq EYA3-GUCA1C EYA3 chr1 28088524 - GUCA1C chr3 108920585 - Exonic hg38 LUAD TCGA-49-AAR3-01A 10 49 5'UTR-CDS Inter-chr p35.3 q13.13 Seq+ 93514 ChimerSeq TCGA FAWG TCGA_RNA-Seq THOC1-TYMSOS THOC1 chr18 260186 - TYMSOS chr18 649964 - Exonic hg38 LUAD TCGA-49-AAR4-01A 2 4 CDS-3'UTR Intra-chr p11.32 p11.32 93515 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC38A10-TESPA1 SLC38A10 chr17 81294823 - TESPA1 chr12 54966151 - Exonic hg38 LUAD TCGA-49-AAR9-01A 2 7 Out-of-frame Inter-chr q25.3 q13.2 Seq+ 93516 ChimerSeq TCGA FAWG TCGA_RNA-Seq EZH2-TMEM176B EZH2 chr7 148884164 - TMEM176B chr7 150796574 - Exonic hg38 LUAD TCGA-49-AAR9-01A 1 3 5'UTR-5'UTR Intra-chr q36.1 Oncogene Tumor suppressor gene q36.1 Seq+ 93517 ChimerSeq TCGA FAWG TCGA_RNA-Seq SREBF2-MEI1 SREBF2 chr22 41868792 + MEI1 chr22 41770686 + Exonic hg38 LUAD TCGA-49-AARE-01A 13 46 In-Frame Intra-chr q13.2 Transcription factor q13.2 Seq+ 93518 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRCC-RHBG PRCC chr1 156768239 + RHBG chr1 156382748 + Exonic hg38 LUAD TCGA-49-AARE-01A 13 18 Out-of-frame Intra-chr q23.1 q22 Seq+ 93519 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA3-DNM2 NCOA3 chr20 47628023 + DNM2 chr19 10829036 + Exonic hg38 LUAD TCGA-49-AARE-01A 1 12 Out-of-frame Inter-chr q13.12 Transcription factor p13.2 93520 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL2L1-VWA5B1 BCL2L1 chr20 31721655 - VWA5B1 chr1 20310576 + Exonic hg38 LUAD TCGA-49-AARE-01A 1 7 CDS-5'UTR Inter-chr q11.21 Oncogene p36.12 93521 ChimerSeq TCGA FAWG TCGA_RNA-Seq NINL-MIR663AHG NINL chr20 25585455 - MIR663AHG chr20 26192232 - Exonic hg38 LUAD TCGA-49-AARE-01A 1 5 5'UTR-3'UTR Intra-chr p11.21 p11.1 93522 ChimerSeq TCGA FAWG TCGA_RNA-Seq KEAP1-EYA2 KEAP1 chr19 10489192 - EYA2 chr20 47169139 + Exonic hg38 LUAD TCGA-49-AARE-01A 1 4 Out-of-frame Inter-chr p13.2 Oncogene q13.12 93523 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL33-ZNF512 MRPL33 chr2 27771799 + ZNF512 chr2 27607845 + Exonic hg38 LUAD TCGA-49-AARE-01A 1 3 Out-of-frame Intra-chr p23.2 p23.3 Transcription factor Seq+ 93524 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM2-OS9 R3HDM2 chr12 57255990 - OS9 chr12 57715760 + Exonic hg38 LUAD TCGA-49-AARO-01A 2 16 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 93525 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL49-ARL2 MRPL49 chr11 65122424 + ARL2 chr11 65020419 + Exonic hg38 LUAD TCGA-49-AARQ-01A 15 49 In-Frame Intra-chr q13.1 q13.1 Seq+ 93526 ChimerSeq TCGA FAWG TCGA_RNA-Seq NECTIN4-PFDN2 NECTIN4 chr1 161089218 - PFDN2 chr1 161102375 - Exonic hg38 LUAD TCGA-49-AARQ-01A 8 31 Out-of-frame Intra-chr q23.3 q23.3 93527 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNKL-KIAA0430 UNKL chr16 1366018 - KIAA0430 chr16 15595229 - Exonic hg38 LUAD TCGA-49-AARQ-01A 5 10 Out-of-frame Intra-chr p13.3 Seq+ 93528 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAPGEF1-TTF1 RAPGEF1 chr9 131638635 - TTF1 chr9 132376168 - Exonic hg38 LUAD TCGA-4B-A93V-01A 20 52 Out-of-frame Intra-chr q34.13 q34.13 Tumor suppressor gene Transcription factor Seq+ 93529 ChimerSeq TCGA FAWG TCGA_RNA-Seq IDI1-AKR1C3 IDI1 chr10 1048864 - AKR1C3 chr10 5077900 + Exonic hg38 LUAD TCGA-4B-A93V-01A 8 13 CDS-5'UTR Intra-chr p15.3 p15.1 Seq+ 93530 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIP2C-TUBB8 DIP2C chr10 689494 - TUBB8 chr10 48912 - Exonic hg38 LUAD TCGA-4B-A93V-01A 3 5 Out-of-frame Intra-chr p15.3 p15.3 Seq+ 93531 ChimerSeq TCGA FAWG TCGA_RNA-Seq PNPLA7-SNAPC4 PNPLA7 chr9 137484587 - SNAPC4 chr9 136388591 - Exonic hg38 LUAD TCGA-4B-A93V-01A 1 9 Out-of-frame Intra-chr q34.3 q34.3 Transcription factor Seq+ 93532 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD2-POGLUT1 SETD2 chr3 47097955 - POGLUT1 chr3 119488929 + Exonic hg38 LUAD TCGA-50-5044-01A 3 8 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene q13.33 Seq+ 93533 ChimerSeq TCGA FAWG TCGA_RNA-Seq EMP2-BCAR4 EMP2 chr16 10580549 - BCAR4 chr16 11820297 - Exonic hg38 LUAD TCGA-50-5049-01A 3 19 5'UTR-3'UTR Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 93534 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC28A-CLEC16A CCDC28A chr6 138779985 + CLEC16A chr16 11166388 + Exonic hg38 LUAD TCGA-50-5049-01A 2 12 In-Frame Inter-chr q24.1 p13.13 Seq+ 93535 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAB2IP-LAMC3 DAB2IP chr9 121766730 + LAMC3 chr9 131068078 + Exonic hg38 LUAD TCGA-50-5049-01A 2 2 Out-of-frame Intra-chr q33.2 Tumor suppressor gene q34.12 Seq+ 93536 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP1-C12orf80 SENP1 chr12 48096343 - C12orf80 chr12 52212602 - Exonic hg38 LUAD TCGA-50-5051-01A 6 17 CDS-5'UTR Intra-chr q13.11 q13.13 93537 ChimerSeq TCGA FAWG TCGA_RNA-Seq TYW1-TSFM TYW1 chr7 66998954 + TSFM chr12 57783110 + Exonic hg38 LUAD TCGA-50-5055-01A 2 13 In-Frame Inter-chr q11.21 q14.1 Seq+ 93538 ChimerSeq TCGA FAWG TCGA_RNA-Seq CWC25-B4GALNT2 CWC25 chr17 38820901 - B4GALNT2 chr17 49141247 + Exonic hg38 LUAD TCGA-50-5066-01A 4 9 5'UTR-5'UTR Intra-chr q12 q21.32 Seq+ 93539 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF3-RUNDC3B ZNF3 chr7 100075135 - RUNDC3B chr7 87693908 + Exonic hg38 LUAD TCGA-50-5066-01A 4 7 In-Frame Intra-chr q22.1 Transcription factor q21.12 Seq+ 93540 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMED5-TMIGD3 TMED5 chr1 93180054 - TMIGD3 chr1 111485840 - Exonic hg38 LUAD TCGA-50-5066-01A 2 4 Out-of-frame Intra-chr p22.1 p13.2 93541 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN4-EPS8L2 TSPAN4 chr11 847300 + EPS8L2 chr11 720062 + Exonic hg38 LUAD TCGA-50-5066-01A 1 1 5'UTR-CDS Intra-chr p15.5 p15.5 Seq+ 93542 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP2B7P-EGLN2 CYP2B7P chr19 40924443 + EGLN2 chr19 40807809 + Exonic hg38 LUAD TCGA-50-5072-01A 1 12 5'UTR-CDS Intra-chr q13.2 q13.2 93543 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRBP1-TASP1 RRBP1 chr20 17633460 - TASP1 chr20 13417521 - Exonic hg38 LUAD TCGA-50-5072-01A 1 12 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 93544 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF4-TSHZ2 TAF4 chr20 61997550 - TSHZ2 chr20 53487144 + Exonic hg38 LUAD TCGA-50-5072-01A 2 6 5'UTR-3'UTR Intra-chr q13.2 Transcription factor Seq+ 93545 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM87B-MERTK TMEM87B chr2 112055756 + MERTK chr2 111994251 + Exonic hg38 LUAD TCGA-50-5072-01A 1 6 In-Frame Intra-chr q13 q13 Seq+ 93546 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNAI1-PFDN4 SNAI1 chr20 49984351 + PFDN4 chr20 54219019 + Exonic hg38 LUAD TCGA-50-5072-01A 1 5 Out-of-frame Intra-chr q13.13 Transcription factor q13.2 Seq+ 93547 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERO1B-HEATR1 ERO1B chr1 236225070 - HEATR1 chr1 236558529 - Exonic hg38 LUAD TCGA-50-5072-01A 1 1 In-Frame Intra-chr q42.3 q43 93548 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPWD1-NLN PPWD1 chr5 65579613 + NLN chr5 65780179 + Exonic hg38 LUAD TCGA-50-5930-01A 3 3 In-Frame Intra-chr q12.3 q12.3 Seq+ 93549 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF264-PIGG ZNF264 chr19 57194001 + PIGG chr4 521056 + Exonic hg38 LUAD TCGA-50-5930-01A 2 5 In-Frame Inter-chr q13.43 Transcription factor p16.3 Seq+ 93550 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNC93B1-C11orf72 UNC93B1 chr11 68003022 - C11orf72 chr11 67606011 - Exonic hg38 LUAD TCGA-50-5930-01A 1 7 CDS-3'UTR Intra-chr q13.2 q13.2 93551 ChimerSeq TCGA FAWG TCGA_RNA-Seq GANC-SNAP23 GANC chr15 42297656 + SNAP23 chr15 42528262 + Exonic hg38 LUAD TCGA-50-5930-01A 1 2 Out-of-frame Intra-chr q15.1 q15.1 93552 ChimerSeq TCGA FAWG TCGA_RNA-Seq B3GNT2-KYNU B3GNT2 chr2 62196355 + KYNU chr2 143040428 + Exonic hg38 LUAD TCGA-50-5931-01A 1 1 5'UTR-CDS Intra-chr p15 q22.2 93553 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KC1-CD34 RPS6KC1 chr1 213117410 + CD34 chr1 207900003 - Exonic hg38 LUAD TCGA-50-5932-01A 18 42 In-Frame Intra-chr q32.3 q32.2 Seq+ 93554 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND1B-RCOR3 DENND1B chr1 197715031 - RCOR3 chr1 211260108 + Exonic hg38 LUAD TCGA-50-5932-01A 1 11 Out-of-frame Intra-chr q31.3 q32.2 Seq+ 93555 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDLBP-CADM2 HDLBP chr2 241315570 - CADM2 chr3 85802047 + Exonic hg38 LUAD TCGA-50-5933-01A 1 6 5'UTR-5'UTR Inter-chr q37.3 p12.1 Tumor suppressor gene Seq+ 93556 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOOK3-TM2D2 HOOK3 chr8 42906258 + TM2D2 chr8 38995693 - Exonic hg38 LUAD TCGA-50-5933-01A 1 6 CDS-5'UTR Intra-chr p11.21 Oncogene p11.22 Seq+ 93557 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADIPOR2-ST8SIA1 ADIPOR2 chr12 1691213 + ST8SIA1 chr12 22070625 - Exonic hg38 LUAD TCGA-50-5935-01A 14 62 Out-of-frame Intra-chr p13.33 p12.1 93558 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGST1-SLCO1A2 MGST1 chr12 16347710 + SLCO1A2 chr12 21334709 - Exonic hg38 LUAD TCGA-50-5935-01A 3 3 5'UTR-5'UTR Intra-chr p12.3 p12.1 Seq+ 93559 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-SLC16A9 CCDC6 chr10 59794473 - SLC16A9 chr10 59684327 - Exonic hg38 LUAD TCGA-50-5936-01A 1 4 CDS-5'UTR Intra-chr q21.2 q21.2 93560 ChimerSeq TCGA FAWG TCGA_RNA-Seq POMT1-NUP214 POMT1 chr9 131503073 + NUP214 chr9 131215212 + Exonic hg38 LUAD TCGA-50-5941-01A 3 19 5'UTR-CDS Intra-chr q34.13 q34.13 Oncogene Seq+ 93561 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE9A-ABCG1 PDE9A chr21 42653883 + ABCG1 chr21 42225671 + Exonic hg38 LUAD TCGA-50-5941-01A 3 18 In-Frame Intra-chr q22.3 q22.3 Seq+ 93562 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R1A-TGFB1 PPP2R1A chr19 52206063 + TGFB1 chr19 41302720 - Exonic hg38 LUAD TCGA-50-5941-01A 3 12 CDS-3'UTR Intra-chr q13.41 Oncogene q13.2 Tumor suppressor gene 93563 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK24-TRIQK STK24 chr13 98576745 - TRIQK chr8 92917010 - Exonic hg38 LUAD TCGA-50-5941-01A 2 9 CDS-5'UTR Inter-chr q32.2 q22.1 Seq+ 93564 ChimerSeq TCGA FAWG TCGA_RNA-Seq LCOR-PNLIPRP3 LCOR chr10 96833479 + PNLIPRP3 chr10 116443055 + Exonic hg38 LUAD TCGA-50-5941-01A 2 5 5'UTR-CDS Intra-chr q24.1 Transcription factor q25.3 Seq+ 93565 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG13-ELP4 ATG13 chr11 46617890 + ELP4 chr11 31783393 + Exonic hg38 LUAD TCGA-50-5941-01A 1 7 5'UTR-CDS Intra-chr p11.2 p13 Seq+ 93566 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRFBP1-PRM1 SRFBP1 chr5 121994670 + PRM1 chr16 11281230 - Exonic hg38 LUAD TCGA-50-5944-01A 22 74 Out-of-frame Inter-chr q23.1 p13.13 Seq+ 93567 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRP68-RCAN1 SRP68 chr17 76063976 - RCAN1 chr21 34523710 - Exonic hg38 LUAD TCGA-50-5944-01A 5 25 In-Frame Inter-chr q25.1 q22.12 Seq+ 93568 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO10-ZNF622 MYO10 chr5 16877609 - ZNF622 chr5 16458629 - Exonic hg38 LUAD TCGA-50-5944-01A 2 16 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 93569 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF205-UBE2I ZNF205 chr16 3113487 + UBE2I chr16 1320438 + Exonic hg38 LUAD TCGA-50-5944-01A 5 1 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 93570 ChimerSeq TCGA FAWG TCGA_RNA-Seq WRB-KCNJ15 WRB chr21 39410937 + KCNJ15 chr21 38296926 + Exonic hg38 LUAD TCGA-50-5944-01A 1 12 Out-of-frame Intra-chr q22.2 q22.13 Seq+ 93571 ChimerSeq TCGA FAWG TCGA_RNA-Seq HLCS-GRIK1 HLCS chr21 36896860 - GRIK1 chr21 29598937 - Exonic hg38 LUAD TCGA-50-5944-01A 2 3 Out-of-frame Intra-chr q22.13 q21.3 Seq+ 93572 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTFDC1-ARHGAP26 RTFDC1 chr20 56468766 + ARHGAP26 chr5 142873400 + Exonic hg38 LUAD TCGA-50-5944-01A 1 6 Out-of-frame Inter-chr q13.31 q31.3 93573 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAN2A1-ATAD3C MAN2A1 chr5 109789527 + ATAD3C chr1 1468384 + Exonic hg38 LUAD TCGA-50-5944-01A 1 3 Out-of-frame Inter-chr q21.3 p36.33 93574 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC2-CRB3 TANC2 chr17 63267873 + CRB3 chr19 6465545 + Exonic hg38 LUAD TCGA-50-5946-01A 38 152 In-Frame Inter-chr q23.2 p13.3 Seq+ 93575 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFX2-EPOR RFX2 chr19 6110393 - EPOR chr19 11378778 - Exonic hg38 LUAD TCGA-50-5946-01A 8 43 5'UTR-CDS Intra-chr p13.3 Transcription factor p13.2 Seq+ 93576 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF91-CCDC88A ZNF91 chr19 23373742 - CCDC88A chr2 55296523 - Exonic hg38 LUAD TCGA-50-5946-01A 1 57 In-Frame Inter-chr p12 Transcription factor p16.1 Seq+ 93577 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNK-ZNF266 UNK chr17 75784984 + ZNF266 chr19 9420218 - Exonic hg38 LUAD TCGA-50-5946-01A 4 38 5'UTR-5'UTR Inter-chr q25.1 p13.2 Transcription factor Seq+ 93578 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD18B-SNX30 ANKRD18B chr9 33550579 + SNX30 chr9 112836214 + Exonic hg38 LUAD TCGA-50-5946-01A 4 12 In-Frame Intra-chr p13.3 q32 Seq+ 93579 ChimerSeq TCGA FAWG TCGA_RNA-Seq POFUT1-ITCH POFUT1 chr20 32216721 + ITCH chr20 34442208 + Exonic hg38 LUAD TCGA-50-6590-01A 13 34 In-Frame Intra-chr q11.21 q11.22 Seq+ 93580 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D14-BRSK2 TBC1D14 chr4 6924111 + BRSK2 chr11 1436040 + Exonic hg38 LUAD TCGA-50-6590-01A 5 1 Out-of-frame Inter-chr p16.1 p15.5 CAMK:CAMKL Seq+ 93581 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCGF3-FAM86MP PCGF3 chr4 735027 + FAM86MP chr4 9702896 + Exonic hg38 LUAD TCGA-50-6590-01A 1 12 Out-of-frame Intra-chr p16.3 p16.1 93582 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF417-BAX ZNF417 chr19 57912060 - BAX chr19 48960810 + Exonic hg38 LUAD TCGA-50-6591-01A 64 158 Out-of-frame Intra-chr q13.43 Transcription factor q13.33 Tumor suppressor gene Seq+ 93583 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLI3-HIBADH GLI3 chr7 42148226 - HIBADH chr7 27632445 - Exonic hg38 LUAD TCGA-50-6591-01A 4 38 Out-of-frame Intra-chr p14.1 Transcription factor p15.2 Seq+ 93584 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDS5B-CD3EAP PDS5B chr13 32586593 + CD3EAP chr19 45407094 + Exonic hg38 LUAD TCGA-50-6591-01A 2 17 5'UTR-CDS Inter-chr q13.1 Tumor suppressor gene q13.32 Seq+ 93585 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCA4-FOXO1 SMARCA4 chr19 11041560 + FOXO1 chr13 40474095 - Exonic hg38 LUAD TCGA-50-6591-01A 1 21 CDS-3'UTR Inter-chr p13.2 Oncogene Tumor suppressor gene q14.11 Oncogene Tumor suppressor gene Transcription factor 93586 ChimerSeq TCGA FAWG TCGA_RNA-Seq DEF8-FBXO31 DEF8 chr16 89964575 + FBXO31 chr16 87331510 - Exonic hg38 LUAD TCGA-50-6591-01A 1 7 In-Frame Intra-chr q24.3 q24.2 Tumor suppressor gene Seq+ 93587 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRERF1-GNMT TRERF1 chr6 42362997 - GNMT chr6 42962212 + Exonic hg38 LUAD TCGA-50-6591-01A 1 6 5'UTR-5'UTR Intra-chr p21.1 Transcription factor p21.1 Tumor suppressor gene Seq+ 93588 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2E2-GSR GTF2E2 chr8 30653433 - GSR chr8 30693055 - Exonic hg38 LUAD TCGA-50-6592-01A 5 38 Out-of-frame Intra-chr p12 p12 Seq+ 93589 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERCC3-MAP3K2 ERCC3 chr2 127280447 - MAP3K2 chr2 127314883 - Exonic hg38 LUAD TCGA-50-6592-01A 2 8 In-Frame Intra-chr q14.3 Oncogene q14.3 STE:STE11 Seq+ 93590 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHIC2-MANBA CHIC2 chr4 54048955 - MANBA chr4 102690771 - Exonic hg38 LUAD TCGA-50-6592-01A 1 7 Out-of-frame Intra-chr q12 q24 Seq+ 93591 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANK2-ALPK1 ANK2 chr4 112904514 + ALPK1 chr4 112438484 + Exonic hg38 LUAD TCGA-50-6592-01A 1 4 Out-of-frame Intra-chr q25 q25 Seq+ 93592 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC43-ATP11A CCDC43 chr17 44689550 - ATP11A chr13 112717322 + Exonic hg38 LUAD TCGA-50-6593-01A 13 66 Out-of-frame Inter-chr q21.31 q34 93593 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPINT2-DPF1 SPINT2 chr19 38264998 + DPF1 chr19 38222708 - Exonic hg38 LUAD TCGA-50-6594-01A 53 88 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 Transcription factor Seq+ 93594 ChimerSeq TCGA FAWG TCGA_RNA-Seq JARID2-ATM JARID2 chr6 15246584 + ATM chr11 108343222 + Exonic hg38 LUAD TCGA-50-6594-01A 1 19 In-Frame Inter-chr p22.3 q22.3 Atypical:PIKK Oncogene Tumor suppressor gene Seq+ 93595 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASPHD2-DDX17 ASPHD2 chr22 26429486 + DDX17 chr22 38492115 - Exonic hg38 LUAD TCGA-50-6594-01A 2 2 5'UTR-CDS Intra-chr q12.1 q13.1 Seq+ 93596 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBTD1-PHB MBTD1 chr17 51259143 - PHB chr17 49413291 - Exonic hg38 LUAD TCGA-50-6595-01A 2 5 5'UTR-5'UTR Intra-chr q21.33 q21.33 Tumor suppressor gene Seq+ 93597 ChimerSeq TCGA FAWG TCGA_RNA-Seq FXR1-RPH3A FXR1 chr3 180957928 + RPH3A chr12 112718006 + Exonic hg38 LUAD TCGA-50-6595-01A 1 2 CDS-5'UTR Inter-chr q26.33 q24.13 93598 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNK-B4GALNT2 UNK chr17 75784984 + B4GALNT2 chr17 49141247 + Exonic hg38 LUAD TCGA-50-6673-01A 23 126 In-Frame Intra-chr q25.1 q21.32 Seq+ 93599 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM107-WRAP53 TMEM107 chr17 8176200 - WRAP53 chr17 7700741 + Exonic hg38 LUAD TCGA-50-6673-01A 29 45 In-Frame Intra-chr p13.1 p13.1 Seq+ 93600 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM222B-UNC5D FAM222B chr17 28812209 - UNC5D chr8 35750582 + Exonic hg38 LUAD TCGA-50-6673-01A 10 61 5'UTR-CDS Inter-chr q11.2 p12 Tumor suppressor gene Seq+ 93601 ChimerSeq TCGA FAWG TCGA_RNA-Seq COBL-DUSP14 COBL chr7 51085166 - DUSP14 chr17 37510677 + Exonic hg38 LUAD TCGA-50-6673-01A 11 38 CDS-3'UTR Inter-chr p12.1 q12 Seq+ 93602 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF170-SFRP1 RNF170 chr8 42887728 - SFRP1 chr8 41265489 - Exonic hg38 LUAD TCGA-50-6673-01A 5 27 Out-of-frame Intra-chr p11.21 p11.21 Tumor suppressor gene Seq+ 93603 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR2A-NAA38 POLR2A chr17 7484857 + NAA38 chr17 7858831 - Exonic hg38 LUAD TCGA-50-6673-01A 3 16 3'UTR-CDS Intra-chr p13.1 p13.1 93604 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDIA4-TADA2A PDIA4 chr7 149003944 - TADA2A chr17 37465431 + Exonic hg38 LUAD TCGA-50-6673-01A 5 7 CDS-3'UTR Inter-chr q36.1 q12 Seq+ 93605 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP5-TPGS2 ARHGAP5 chr14 32077435 + TPGS2 chr18 36807934 - Exonic hg38 LUAD TCGA-50-6673-01A 1 6 5'UTR-CDS Inter-chr q12 q12.2 93606 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO10-NOL7 MYO10 chr5 16818009 - NOL7 chr6 13620208 + Exonic hg38 LUAD TCGA-50-7109-01A 1 5 Out-of-frame Inter-chr p15.1 p23 Tumor suppressor gene 93607 ChimerSeq TCGA FAWG TCGA_RNA-Seq MINK1-NQO2 MINK1 chr17 4833640 + NQO2 chr6 3010025 + Exonic hg38 LUAD TCGA-50-8460-01A 9 50 Out-of-frame Inter-chr p13.2 p25.2 Seq+ 93608 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHI3L1-SFTPB CHI3L1 chr1 203182731 - SFTPB chr2 85659682 - Exonic hg38 LUAD TCGA-50-8460-01A 1 38 5'UTR-3'UTR Inter-chr q32.1 p11.2 93609 ChimerSeq TCGA FAWG TCGA_RNA-Seq EML4-ALK EML4 chr2 42264951 + ALK chr2 29223528 - Exonic hg38 LUAD TCGA-50-8460-01A 5 16 Out-of-frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 93610 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM41B-TEKT1 TMEM41B chr11 9299584 - TEKT1 chr17 6815962 - Exonic hg38 LUAD TCGA-50-8460-01A 5 10 In-Frame Inter-chr p15.4 p13.1 Seq+ 93611 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA2-LEPROTL1 NCOA2 chr8 70403700 - LEPROTL1 chr8 30101898 + Exonic hg38 LUAD TCGA-53-7624-01A 3 20 5'UTR-CDS Intra-chr q13.3 Oncogene Transcription factor p12 Seq+ 93612 ChimerSeq TCGA FAWG TCGA_RNA-Seq TYMP-SYCE3 TYMP chr22 50528512 - SYCE3 chr22 50551402 - Exonic hg38 LUAD TCGA-53-7624-01A 2 6 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 93613 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAD-STX5 BAD chr11 64271613 - STX5 chr11 62807628 - Exonic hg38 LUAD TCGA-53-7813-01A 2 2 Out-of-frame Intra-chr q13.1 q12.3 Seq+ 93614 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4K4-MUCL1 MAP4K4 chr2 101698538 + MUCL1 chr12 54855116 + Exonic hg38 LUAD TCGA-53-7813-01A 1 5 Out-of-frame Inter-chr q11.2 q13.2 Seq+ 93615 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACROD1-PLA2G16 MACROD1 chr11 64151239 - PLA2G16 chr11 63614068 - Exonic hg38 LUAD TCGA-53-A4EZ-01A 19 34 Out-of-frame Intra-chr q13.1 q13.1 Tumor suppressor gene Seq+ 93616 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUMA1-TRPT1 NUMA1 chr11 72004640 - TRPT1 chr11 64225869 - Exonic hg38 LUAD TCGA-53-A4EZ-01A 8 71 CDS-5'UTR Intra-chr q13.4 Oncogene q13.1 Seq+ 93617 ChimerSeq TCGA FAWG TCGA_RNA-Seq SF1-SYT7 SF1 chr11 64778362 - SYT7 chr11 61533124 - Exonic hg38 LUAD TCGA-53-A4EZ-01A 7 64 Out-of-frame Intra-chr q13.1 q12.2 Seq+ 93618 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLA2-OOSP1 POLA2 chr11 65282521 + OOSP1 chr11 59942847 + Exonic hg38 LUAD TCGA-53-A4EZ-01A 4 40 CDS-3'UTR Intra-chr q13.1 q12.1 93619 ChimerSeq TCGA FAWG TCGA_RNA-Seq THAP12-POLD4 THAP12 chr11 76380748 - POLD4 chr11 67353077 - Exonic hg38 LUAD TCGA-53-A4EZ-01A 5 20 Out-of-frame Intra-chr q13.5 Transcription factor q13.2 93620 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMC2-PZP CMC2 chr16 81006734 - PZP chr12 9160025 - Exonic hg38 LUAD TCGA-53-A4EZ-01A 2 18 5'UTR-CDS Inter-chr q23.2 p13.31 Seq+ 93621 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC4-CDC42EP2 DNAJC4 chr11 64231964 + CDC42EP2 chr11 65320544 + Exonic hg38 LUAD TCGA-53-A4EZ-01A 1 1 CDS-5'UTR Intra-chr q13.1 q13.1 93622 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARA-STAC2 RARA chr17 40318448 + STAC2 chr17 39218173 - Exonic hg38 LUAD TCGA-55-1592-01A 23 86 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor q12 Seq+ 93623 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMP2K-SLC25A31 BMP2K chr4 78865720 + SLC25A31 chr4 127773386 + Exonic hg38 LUAD TCGA-55-1592-01A 15 56 In-Frame Intra-chr q21.21 q28.1 Seq+ 93624 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC17-CIB2 DNAJC17 chr15 40807369 - CIB2 chr15 78123739 - Exonic hg38 LUAD TCGA-55-1592-01A 1 43 In-Frame Intra-chr q15.1 q25.1 Seq+ 93625 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGF13-STK26 FGF13 chrX 139204059 - STK26 chrX 132054631 + Exonic hg38 LUAD TCGA-55-1592-01A 5 11 Out-of-frame Intra-chr q27.1 q26.2 93626 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELF1-MYOM1 CELF1 chr11 47552992 - MYOM1 chr18 3131496 - Exonic hg38 LUAD TCGA-55-1592-01A 4 12 5'UTR-CDS Inter-chr p11.2 p11.31 Seq+ 93627 ChimerSeq TCGA FAWG TCGA_RNA-Seq MNAT1-SIX1 MNAT1 chr14 60734951 + SIX1 chr14 60646577 - Exonic hg38 LUAD TCGA-55-1592-01A 1 16 In-Frame Intra-chr q23.1 q23.1 Transcription factor Seq+ 93628 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITPR2-RASSF3 ITPR2 chr12 26790157 - RASSF3 chr12 64684787 + Exonic hg38 LUAD TCGA-55-1592-01A 3 4 Out-of-frame Intra-chr p11.23 q14.2 Tumor suppressor gene Seq+ 93629 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASSF3-CCDC120 RASSF3 chr12 64691579 + CCDC120 chrX 49067176 + Exonic hg38 LUAD TCGA-55-1592-01A 1 9 Out-of-frame Inter-chr q14.2 Tumor suppressor gene p11.23 93630 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTRC-IKZF3 BTRC chr10 101462058 + IKZF3 chr17 39832151 - Exonic hg38 LUAD TCGA-55-1592-01A 1 4 Out-of-frame Inter-chr q24.32 q21.1 Tumor suppressor gene Transcription factor 93631 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFMID-IGHJ4 AFMID chr17 78190764 + IGHJ4 chr14 105864254 - Exonic hg38 LUAD TCGA-55-1594-01A 12 0 Out-of-frame Inter-chr q25.3 93632 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIPOL1-SFTA3 MIPOL1 chr14 37198104 + SFTA3 chr14 36477098 - Exonic hg38 LUAD TCGA-55-1594-01A 2 18 5'UTR-3'UTR Intra-chr q13.3 q13.3 Seq+ 93633 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLDC2-DYNLRB1 TLDC2 chr20 36889403 + DYNLRB1 chr20 34534628 + Exonic hg38 LUAD TCGA-55-1594-01A 1 2 3'UTR-CDS Intra-chr q11.23 q11.22 93634 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD2AP-SUPT3H CD2AP chr6 47533755 + SUPT3H chr6 45106006 - Exonic hg38 LUAD TCGA-55-1595-01A 2 29 Out-of-frame Intra-chr p12.3 p21.1 Seq+ 93635 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM222B-CHD7 FAM222B chr17 28812209 - CHD7 chr8 60741259 + Exonic hg38 LUAD TCGA-55-1595-01A 3 21 5'UTR-5'UTR Inter-chr q11.2 q12.2 93636 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCAPD2-VWF NCAPD2 chr12 6494154 + VWF chr12 5949883 - Exonic hg38 LUAD TCGA-55-1596-01A 82 54 5'UTR-CDS Intra-chr p13.31 p13.31 Seq+ 93637 ChimerSeq TCGA FAWG TCGA_RNA-Seq MROH2B-MRPS30 MROH2B chr5 41017850 - MRPS30 chr5 44813106 + Exonic hg38 LUAD TCGA-55-1596-01A 18 96 In-Frame Intra-chr p13.1 p12 Seq+ 93638 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K8-MROH2B MAP3K8 chr10 30434378 + MROH2B chr5 41019018 - Exonic hg38 LUAD TCGA-55-1596-01A 11 35 5'UTR-CDS Inter-chr p11.23 STE:STE11 Tumor suppressor gene p13.1 Seq+ 93639 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBA52-CACNA1C UBA52 chr19 18573748 + CACNA1C chr12 2611903 + Exonic hg38 LUAD TCGA-55-1596-01A 1 10 CDS-3'UTR Inter-chr p13.11 p13.33 93640 ChimerSeq TCGA FAWG TCGA_RNA-Seq MALRD1-GPR158 MALRD1 chr10 19283181 + GPR158 chr10 25466651 + Exonic hg38 LUAD TCGA-55-1596-01A 1 2 Out-of-frame Intra-chr p12.31 p12.1 93641 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L4A-PLAC8L1 EPB41L4A chr5 112418941 - PLAC8L1 chr5 146098292 - Exonic hg38 LUAD TCGA-55-6543-01A 11 39 Out-of-frame Intra-chr q22.2 q32 Seq+ 93642 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM33-RET TRIM33 chr1 114421436 - RET chr10 43116584 + Exonic hg38 LUAD TCGA-55-6543-01A 4 25 In-Frame Inter-chr p13.2 Oncogene q11.21 TK:Ret Oncogene KB Pub Seq+ 93643 ChimerSeq TCGA FAWG TCGA_RNA-Seq WAPL-NRP1 WAPL chr10 86446305 - NRP1 chr10 33221847 - Exonic hg38 LUAD TCGA-55-6543-01A 1000 1000 Out-of-frame Intra-chr q23.2 p11.22 93644 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUL2-PARD3 CUL2 chr10 35044566 - PARD3 chr10 34517159 - Exonic hg38 LUAD TCGA-55-6642-01A 2 27 In-Frame Intra-chr p11.21 Tumor suppressor gene p11.21 Seq+ 93645 ChimerSeq TCGA FAWG TCGA_RNA-Seq FUT10-NDUFV2 FUT10 chr8 33461372 - NDUFV2 chr18 9117838 + Exonic hg38 LUAD TCGA-55-6642-01A 2 3 In-Frame Inter-chr p12 p11.22 Seq+ 93646 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF12-CNTN5 ARHGEF12 chr11 120407823 + CNTN5 chr11 99916054 + Exonic hg38 LUAD TCGA-55-6642-01A 1 4 In-Frame Intra-chr q23.3 Tumor suppressor gene q22.1 Seq+ 93647 ChimerSeq TCGA FAWG TCGA_RNA-Seq VBP1-GABRA3 VBP1 chrX 155216575 + GABRA3 chrX 152224845 - Exonic hg38 LUAD TCGA-55-6712-01A 13 155 Out-of-frame Intra-chr q28 q28 Seq+ 93648 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKIRIN1-MEAF6 AKIRIN1 chr1 38998311 + MEAF6 chr1 37501996 - Exonic hg38 LUAD TCGA-55-6712-01A 12 60 In-Frame Intra-chr p34.3 p34.3 Seq+ 93649 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHIP-FTO PHIP chr6 79042843 - FTO chr16 54111762 + Exonic hg38 LUAD TCGA-55-6712-01A 4 79 In-Frame Inter-chr q14.1 q12.2 Seq+ 93650 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM1-SKINT1L PUM1 chr1 30945346 - SKINT1L chr1 48096590 - Exonic hg38 LUAD TCGA-55-6712-01A 8 54 CDS-3'UTR Intra-chr p35.2 p33 93651 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTM1-VBP1 MTM1 chrX 150619139 + VBP1 chrX 155220183 + Exonic hg38 LUAD TCGA-55-6712-01A 4 44 In-Frame Intra-chr q28 q28 Seq+ 93652 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARF3-CHFR ARF3 chr12 48940948 - CHFR chr12 132887340 - Exonic hg38 LUAD TCGA-55-6712-01A 1 22 CDS-5'UTR Intra-chr q13.12 q24.33 Tumor suppressor gene Seq+ 93653 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO34-NID2 FBXO34 chr14 55355222 + NID2 chr14 52042931 - Exonic hg38 LUAD TCGA-55-6712-01A 1 5 3'UTR-CDS Intra-chr q22.3 q22.1 93654 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSE1-GLYR1 GSE1 chr16 85556363 + GLYR1 chr16 4805310 - Exonic hg38 LUAD TCGA-55-6968-01A 22 81 5'UTR-CDS Intra-chr q24.1 p13.3 Transcription factor 93655 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK39-SCN3A STK39 chr2 168129541 - SCN3A chr2 165155903 - Exonic hg38 LUAD TCGA-55-6968-01A 2 3 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 93656 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBMS1-METTL8 RBMS1 chr2 160493289 - METTL8 chr2 171339554 - Exonic hg38 LUAD TCGA-55-6968-01A 2 1 Out-of-frame Intra-chr q24.2 q31.1 93657 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB11FIP1-ATP6V1H RAB11FIP1 chr8 37862737 - ATP6V1H chr8 53801896 - Exonic hg38 LUAD TCGA-55-6969-01A 4 48 3'UTR-CDS Intra-chr p11.23 q11.23 Seq+ 93658 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF229-ERCC1 ZNF229 chr19 44447513 - ERCC1 chr19 45423381 - Exonic hg38 LUAD TCGA-55-6969-01A 3 27 5'UTR-5'UTR Intra-chr q13.31 Transcription factor q13.32 Oncogene Seq+ 93659 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAM10-ALDH1A2 ADAM10 chr15 58749480 - ALDH1A2 chr15 58420105 - Exonic hg38 LUAD TCGA-55-6969-01A 3 25 CDS-5'UTR Intra-chr q21.3 q21.3 Tumor suppressor gene 93660 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCM1-TEX15 PCM1 chr8 17993619 + TEX15 chr8 30860057 - Exonic hg38 LUAD TCGA-55-6969-01A 3 13 In-Frame Intra-chr p22 p12 93661 ChimerSeq TCGA FAWG TCGA_RNA-Seq IPO7-AKIP1 IPO7 chr11 9420698 + AKIP1 chr11 8914826 + Exonic hg38 LUAD TCGA-55-6969-01A 3 10 In-Frame Intra-chr p15.4 p15.4 Seq+ 93662 ChimerSeq TCGA FAWG TCGA_RNA-Seq PACS2-C14orf180 PACS2 chr14 105355177 + C14orf180 chr14 104586415 + Exonic hg38 LUAD TCGA-55-6969-01A 2 8 CDS-3'UTR Intra-chr q32.33 q32.33 Seq+ 93663 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLOCK-NMU CLOCK chr4 55455897 - NMU chr4 55595411 - Exonic hg38 LUAD TCGA-55-6969-01A 1 8 CDS-3'UTR Intra-chr q12 Transcription factor q12 Seq+ 93664 ChimerSeq TCGA FAWG TCGA_RNA-Seq STUM-VTI1A STUM chr1 226549106 + VTI1A chr10 112527087 + Exonic hg38 LUAD TCGA-55-6969-01A 2 3 Out-of-frame Inter-chr q42.12 q25.2 93665 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBD1-TOM1L1 TUBD1 chr17 59886083 - TOM1L1 chr17 54912666 + Exonic hg38 LUAD TCGA-55-6969-01A 1 5 Out-of-frame Intra-chr q23.1 q22 Seq+ 93666 ChimerSeq TCGA FAWG TCGA_RNA-Seq NBEAL1-CARF NBEAL1 chr2 203157825 + CARF chr2 202952559 + Exonic hg38 LUAD TCGA-55-6969-01A 1 4 Out-of-frame Intra-chr q33.2 q33.2 Transcription factor 93667 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSK3A-CXCL17 GSK3A chr19 42239955 - CXCL17 chr19 42428981 - Exonic hg38 LUAD TCGA-55-6969-01A 1 2 Out-of-frame Intra-chr q13.2 CMGC:GSK q13.2 93668 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR45B-JDP2 WDR45B chr17 82643949 - JDP2 chr14 75437898 + Exonic hg38 LUAD TCGA-55-6969-01A 1 2 In-Frame Inter-chr q25.3 q24.3 Tumor suppressor gene Transcription factor 93669 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC8-ANK3 TRAPPC8 chr18 31942608 - ANK3 chr10 60205890 - Exonic hg38 LUAD TCGA-55-6971-01A 19 89 Out-of-frame Inter-chr q12.1 q21.2 Seq+ 93670 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOSR1-AP2B1 GOSR1 chr17 30492753 + AP2B1 chr17 35682695 + Exonic hg38 LUAD TCGA-55-6971-01A 11 35 In-Frame Intra-chr q11.2 q12 Seq+ 93671 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCOLN2-CDK1 MCOLN2 chr1 84996796 - CDK1 chr10 60780141 + Exonic hg38 LUAD TCGA-55-6971-01A 6 13 5'UTR-5'UTR Inter-chr p22.3 q21.2 Seq+ 93672 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFTPB-MPC1 SFTPB chr2 85666616 - MPC1 chr6 166365449 - Exonic hg38 LUAD TCGA-55-6971-01A 3 1 Out-of-frame Inter-chr p11.2 q27 Seq+ 93673 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC43A2-PRPF8 SLC43A2 chr17 1613195 - PRPF8 chr17 1662153 - Exonic hg38 LUAD TCGA-55-6971-01A 1 9 5'UTR-5'UTR Intra-chr 93674 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFTN1-DAZL RFTN1 chr3 16409375 - DAZL chr3 16598598 - Exonic hg38 LUAD TCGA-55-6972-01A 3 23 In-Frame Intra-chr p24.3 p24.3 Seq+ 93675 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF7L1-DNAH6 TCF7L1 chr2 85134450 + DNAH6 chr2 84745080 + Exonic hg38 LUAD TCGA-55-6972-01A 1 11 CDS-3'UTR Intra-chr p11.2 Oncogene Transcription factor p11.2 Seq+ 93676 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC39A-PHGDH TTC39A chr1 51321721 - PHGDH chr1 119721170 + Exonic hg38 LUAD TCGA-55-6972-01A 1 10 Out-of-frame Intra-chr p32.3 p12 Seq+ 93677 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP3R1-CNRIP1 PPP3R1 chr2 68186468 - CNRIP1 chr2 68317307 - Exonic hg38 LUAD TCGA-55-6972-01A 1 7 Out-of-frame Intra-chr p14 p14 Seq+ 93678 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDLR-C19orf38 LDLR chr19 11100345 + C19orf38 chr19 10858316 + Exonic hg38 LUAD TCGA-55-6972-01A 1 4 In-Frame Intra-chr p13.2 p13.2 Seq+ 93679 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST6GAL1-KNG1 ST6GAL1 chr3 187043310 + KNG1 chr3 186743705 + Exonic hg38 LUAD TCGA-55-6972-01A 1 4 Out-of-frame Intra-chr q27.3 q27.3 Seq+ 93680 ChimerSeq TCGA FAWG TCGA_RNA-Seq EZR-SLC22A2 EZR chr6 158783520 - SLC22A2 chr6 160171437 - Exonic hg38 LUAD TCGA-55-6972-01A 1 3 CDS-3'UTR Intra-chr q25.3 q25.3 93681 ChimerSeq TCGA FAWG TCGA_RNA-Seq E2F5-CA3 E2F5 chr8 85212204 + CA3 chr8 85439712 + Exonic hg38 LUAD TCGA-55-6975-01A 5 13 In-Frame Intra-chr q21.2 Transcription factor q21.2 Seq+ 93682 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNNA1-SLC38A9 CTNNA1 chr5 138753510 + SLC38A9 chr5 55697992 - Exonic hg38 LUAD TCGA-55-6975-01A 2 20 5'UTR-5'UTR Intra-chr q31.2 Oncogene q11.2 Seq+ 93683 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANAPC15-RAI14 ANAPC15 chr11 72110088 - RAI14 chr5 34757468 + Exonic hg38 LUAD TCGA-55-6975-01A 2 5 In-Frame Inter-chr q13.4 p13.2 Seq+ 93684 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN1-ARG1 ATXN1 chr6 16657776 - ARG1 chr6 131576663 + Exonic hg38 LUAD TCGA-55-6978-01A 3 61 5'UTR-CDS Intra-chr p22.3 q23.2 Tumor suppressor gene Seq+ 93685 ChimerSeq TCGA FAWG TCGA_RNA-Seq KHDRBS2-LMBRD1 KHDRBS2 chr6 62285858 - LMBRD1 chr6 69676541 - Exonic hg38 LUAD TCGA-55-6978-01A 4 9 In-Frame Intra-chr q11.1 q13 Seq+ 93686 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKL1-APOL4 MKL1 chr22 40636478 - APOL4 chr22 36202055 - Exonic hg38 LUAD TCGA-55-6978-01A 4 9 Out-of-frame Intra-chr q13.2 q12.3 Seq+ 93687 ChimerSeq TCGA FAWG TCGA_RNA-Seq GCNT2-OSM GCNT2 chr6 10528841 + OSM chr22 30265144 - Exonic hg38 LUAD TCGA-55-6978-01A 2 6 3'UTR-CDS Inter-chr p24.3 q12.2 Seq+ 93688 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRK3-CHEK2 GRK3 chr22 25714570 + CHEK2 chr22 28699937 - Exonic hg38 LUAD TCGA-55-6978-01A 1 2 Out-of-frame Intra-chr q12.1 q12.1 Oncogene Tumor suppressor gene 93689 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPE-TMEM59L COPE chr19 18919223 - TMEM59L chr19 18613872 + Exonic hg38 LUAD TCGA-55-6981-01A 5 41 In-Frame Intra-chr p13.11 p13.11 Seq+ 93690 ChimerSeq TCGA FAWG TCGA_RNA-Seq P3H1-ERI3 P3H1 chr1 42762323 - ERI3 chr1 44221640 - Exonic hg38 LUAD TCGA-55-6982-01A 10 39 In-Frame Intra-chr p34.2 p34.1 93691 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC12A7-TMEM117 SLC12A7 chr5 1094154 - TMEM117 chr12 44299580 + Exonic hg38 LUAD TCGA-55-6982-01A 8 30 5'UTR-CDS Inter-chr p15.33 q12 Seq+ 93692 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPRD1A-GAREM1 RPRD1A chr18 36026900 - GAREM1 chr18 32136460 - Exonic hg38 LUAD TCGA-55-6982-01A 1 4 CDS-3'UTR Intra-chr q12.2 q12.1 93693 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL5A2-SFTPB COL5A2 chr2 189032534 - SFTPB chr2 85666732 - Exonic hg38 LUAD TCGA-55-6983-01A 1000 1000 Out-of-frame Intra-chr q32.2 p11.2 93694 ChimerSeq TCGA FAWG TCGA_RNA-Seq PASK-BOK PASK chr2 241140521 - BOK chr2 241570125 + Exonic hg38 LUAD TCGA-55-6985-01A 2 7 Out-of-frame Intra-chr q37.3 CAMK:CAMKL q37.3 Seq+ 93695 ChimerSeq TCGA FAWG TCGA_RNA-Seq EZR-ROS1 EZR chr6 158770764 - ROS1 chr6 117324415 - Exonic hg38 LUAD TCGA-55-6986-01A 58 249 In-Frame Intra-chr q25.3 q22.1 Oncogene KB Pub Seq+ 93696 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM1L-ITPR2 DNM1L chr12 32679465 + ITPR2 chr12 26436346 - Exonic hg38 LUAD TCGA-55-6986-01A 5 17 Out-of-frame Intra-chr p11.21 p11.23 Seq+ 93697 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGK-SLC25A3P1 PIGK chr1 77166719 - SLC25A3P1 chr1 53417666 - Exonic hg38 LUAD TCGA-55-6987-01A 21 94 CDS-3'UTR Intra-chr p31.1 p32.3 93698 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP8-USP24 LRP8 chr1 53326873 - USP24 chr1 55097172 - Exonic hg38 LUAD TCGA-55-6987-01A 4 14 Out-of-frame Intra-chr p32.3 p32.3 Seq+ 93699 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRWD1-SMC1A BRWD1 chr21 39196498 - SMC1A chrX 53415169 - Exonic hg38 LUAD TCGA-55-6987-01A 2 6 In-Frame Inter-chr q22.2 p11.22 Seq+ 93700 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNE1-METTL24 SYNE1 chr6 152249161 - METTL24 chr6 110246260 - Exonic hg38 LUAD TCGA-55-6987-01A 3 2 In-Frame Intra-chr q25.2 Oncogene q21 Seq+ 93701 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAV1-IPO9 NAV1 chr1 201649425 + IPO9 chr1 201847279 + Exonic hg38 LUAD TCGA-55-6987-01A 1 3 In-Frame Intra-chr q32.1 q32.1 93702 ChimerSeq TCGA FAWG TCGA_RNA-Seq NQO1-JAG1 NQO1 chr16 69726433 - JAG1 chr20 10641244 - Exonic hg38 LUAD TCGA-55-6987-01A 1 2 Out-of-frame Inter-chr q22.1 p12.2 93703 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH2-ADAM30 NOTCH2 chr1 119935472 - ADAM30 chr1 119894596 - Exonic hg38 LUAD TCGA-55-7281-01A 1000 1000 Out-of-frame Intra-chr p12 Oncogene Tumor suppressor gene p12 93704 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIO-DNAH5 TRIO chr5 14390990 + DNAH5 chr5 13931244 - Exonic hg38 LUAD TCGA-55-7283-01A 2 9 CDS-3'UTR Intra-chr p15.2 p15.2 Seq+ 93705 ChimerSeq TCGA FAWG TCGA_RNA-Seq PXN-MSI1 PXN chr12 120265617 - MSI1 chr12 120364755 - Exonic hg38 LUAD TCGA-55-7570-01A 1 5 Out-of-frame Intra-chr q24.23 q24.31 Seq+ 93706 ChimerSeq TCGA FAWG TCGA_RNA-Seq PACS1-SLN PACS1 chr11 66070842 + SLN chr11 107708005 - Exonic hg38 LUAD TCGA-55-7570-01A 1 2 CDS-5'UTR Intra-chr q13.1 q22.3 93707 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF10L-TMCO4 ARHGEF10L chr1 17539950 + TMCO4 chr1 19780766 - Exonic hg38 LUAD TCGA-55-7574-01A 3 1 5'UTR-5'UTR Intra-chr p36.13 p36.13 Seq+ 93708 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBXN4-R3HDM1 UBXN4 chr2 135748369 + R3HDM1 chr2 135709433 + Exonic hg38 LUAD TCGA-55-7576-01A 12 75 In-Frame Intra-chr q21.3 q21.3 Seq+ 93709 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF6-TIPRL DCAF6 chr1 167937008 + TIPRL chr1 168196547 + Exonic hg38 LUAD TCGA-55-7576-01A 10 39 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 93710 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAV2-CNTN5 NAV2 chr11 19868997 + CNTN5 chr11 100255760 + Exonic hg38 LUAD TCGA-55-7576-01A 6 48 In-Frame Intra-chr p15.1 q22.1 Seq+ 93711 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABR-YWHAE ABR chr17 1050050 - YWHAE chr17 1354347 - Exonic hg38 LUAD TCGA-55-7576-01A 6 34 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 93712 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF6-ILDR2 DCAF6 chr1 167937008 + ILDR2 chr1 166939570 - Exonic hg38 LUAD TCGA-55-7576-01A 7 24 In-Frame Intra-chr q24.2 q24.1 Seq+ 93713 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXJ3-CLIC6 FOXJ3 chr1 42265115 - CLIC6 chr21 34707280 + Exonic hg38 LUAD TCGA-55-7576-01A 7 20 In-Frame Inter-chr p34.2 Transcription factor q22.12 Seq+ 93714 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC16A5-OTOP2 SLC16A5 chr17 75089304 + OTOP2 chr17 74927223 + Exonic hg38 LUAD TCGA-55-7576-01A 2 24 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 93715 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNRF3-EWSR1 ZNRF3 chr22 28884066 + EWSR1 chr22 29296239 + Exonic hg38 LUAD TCGA-55-7576-01A 2 11 In-Frame Intra-chr q12.1 q12.2 Seq+ 93716 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF10-SIRT4 RNF10 chr12 120560886 + SIRT4 chr12 120312456 + Exonic hg38 LUAD TCGA-55-7576-01A 1 13 Out-of-frame Intra-chr q24.31 q24.31 Tumor suppressor gene 93717 ChimerSeq TCGA FAWG TCGA_RNA-Seq LYST-NID1 LYST chr1 235770160 - NID1 chr1 235985505 - Exonic hg38 LUAD TCGA-55-7576-01A 1 7 In-Frame Intra-chr q42.3 q42.3 Seq+ 93718 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAPTM4B-ARFGEF1 LAPTM4B chr8 97776108 + ARFGEF1 chr8 67302466 - Exonic hg38 LUAD TCGA-55-7725-01A 3 1 Out-of-frame Intra-chr q22.1 q13.2 Seq+ 93719 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTBP3-SVEP1 PTBP3 chr9 112333470 - SVEP1 chr9 110377366 - Exonic hg38 LUAD TCGA-55-7726-01A 1 27 Out-of-frame Intra-chr q32 q31.3 Seq+ 93720 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALT1-FAM205C B4GALT1 chr9 33135189 - FAM205C chr9 34895084 - Exonic hg38 LUAD TCGA-55-7727-01A 12 84 In-Frame Intra-chr p21.1 p13.3 93721 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITCH-MYL9 ITCH chr20 34492597 + MYL9 chr20 36548032 + Exonic hg38 LUAD TCGA-55-7815-01A 4 18 In-Frame Intra-chr q11.22 q11.23 Seq+ 93722 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAIAP2L1-LRRC23 BAIAP2L1 chr7 98355042 - LRRC23 chr12 6883704 + Exonic hg38 LUAD TCGA-55-7815-01A 1 6 CDS-5'UTR Inter-chr q22.1 p13.31 93723 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAIAP2L1-RPL13P5 BAIAP2L1 chr7 98355042 - RPL13P5 chr12 6883704 + Exonic hg38 LUAD TCGA-55-7815-01A 1 6 CDS-5'UTR Inter-chr q22.1 p13.31 93724 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETHE1-BMP5 ETHE1 chr19 43526515 - BMP5 chr6 55774243 - Exonic hg38 LUAD TCGA-55-7815-01A 1 2 In-Frame Inter-chr q13.31 p12.1 Seq+ 93725 ChimerSeq TCGA FAWG TCGA_RNA-Seq FZR1-NCLN FZR1 chr19 3523058 + NCLN chr19 3201523 + Exonic hg38 LUAD TCGA-55-7903-01A 6 48 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 93726 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHC1-ASH1L SHC1 chr1 154974248 - ASH1L chr1 155339368 - Exonic hg38 LUAD TCGA-55-7903-01A 2 53 5'UTR-CDS Intra-chr q21.3 q22 Transcription factor Seq+ 93727 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT9-ARPC2 CNOT9 chr2 218568978 + ARPC2 chr2 218234352 + Exonic hg38 LUAD TCGA-55-7903-01A 3 20 In-Frame Intra-chr q35 q35 93728 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIB1-NSMCE2 TRIB1 chr8 125433609 + NSMCE2 chr8 125357219 + Exonic hg38 LUAD TCGA-55-7903-01A 3 12 Out-of-frame Intra-chr q24.13 q24.13 Seq+ 93729 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNC50-STARD7 UNC50 chr2 98610895 + STARD7 chr2 96193352 - Exonic hg38 LUAD TCGA-55-7907-01A 4 12 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 93730 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM132D-STX2 TMEM132D chr12 129903261 - STX2 chr12 130813031 - Exonic hg38 LUAD TCGA-55-7907-01A 2 2 In-Frame Intra-chr q24.33 q24.33 Seq+ 93731 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNND2-GPI CTNND2 chr5 11159576 - GPI chr19 34393914 + Exonic hg38 LUAD TCGA-55-7910-01A 2 6 Out-of-frame Inter-chr p15.2 Seq+ 93732 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A17-ST13 SLC25A17 chr22 40773937 - ST13 chr22 40850880 - Exonic hg38 LUAD TCGA-55-7911-01A 7 33 In-Frame Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 93733 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMPR2-KIAA2012 BMPR2 chr2 202377550 + KIAA2012 chr2 202138432 + Exonic hg38 LUAD TCGA-55-7911-01A 6 23 3'UTR-CDS Intra-chr q33.1 TKL:STKR Tumor suppressor gene q33.1 93734 ChimerSeq TCGA FAWG TCGA_RNA-Seq MMP28-KCNJ18 MMP28 chr17 35778888 - KCNJ18 chr17 21695983 + Exonic hg38 LUAD TCGA-55-7911-01A 3 10 5'UTR-5'UTR Intra-chr q12 p11.2 Seq+ 93735 ChimerSeq TCGA FAWG TCGA_RNA-Seq C6orf106-NUDT3 C6orf106 chr6 34646601 - NUDT3 chr6 34341972 - Exonic hg38 LUAD TCGA-55-7913-01B 5 84 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 93736 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPDEF-VSTM2B SPDEF chr6 34555929 - VSTM2B chr19 29563846 + Exonic hg38 LUAD TCGA-55-7913-01B 8 9 5'UTR-CDS Inter-chr p21.31 Transcription factor q12 Seq+ 93737 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAG2-GRIA3 STAG2 chrX 124031125 + GRIA3 chrX 123326026 + Exonic hg38 LUAD TCGA-55-7913-01B 3 9 Out-of-frame Intra-chr q25 Oncogene q25 Seq+ 93738 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC12A2-CSNK1A1 SLC12A2 chr5 128084710 + CSNK1A1 chr5 149520388 - Exonic hg38 LUAD TCGA-55-7913-01B 2 5 In-Frame Intra-chr q23.3 q32 Tumor suppressor gene Seq+ 93739 ChimerSeq TCGA FAWG TCGA_RNA-Seq NECTIN2-SCN1B NECTIN2 chr19 44874478 + SCN1B chr19 35032528 + Exonic hg38 LUAD TCGA-55-7913-01B 2 3 In-Frame Intra-chr q13.32 q13.11 93740 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLIC6-ITSN1 CLIC6 chr21 34670762 + ITSN1 chr21 33882243 + Exonic hg38 LUAD TCGA-55-7913-01B 1 4 In-Frame Intra-chr q22.12 q22.11 Seq+ 93741 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKL2-CXCL11 CDKL2 chr4 75625821 - CXCL11 chr4 76036064 - Exonic hg38 LUAD TCGA-55-7914-01A 11 68 CDS-5'UTR Intra-chr q21.1 CMGC:CDKL q21.1 Seq+ 93742 ChimerSeq TCGA FAWG TCGA_RNA-Seq MUC1-IGHA1 MUC1 chr1 155188411 - IGHA1 chr14 105708135 - Exonic hg38 LUAD TCGA-55-7914-01A 3 22 Out-of-frame Inter-chr q22 Oncogene 93743 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSC22D4-26 TSC22D4 chr7 100478794 - 26 chr22 22673338 + Exonic hg38 LUAD TCGA-55-7994-01A 24 82 Out-of-frame Inter-chr q22.1 93744 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKAA1-TBC1D5 PRKAA1 chr5 40798063 - TBC1D5 chr3 17214370 - Exonic hg38 LUAD TCGA-55-7994-01A 10 35 In-Frame Inter-chr p13.1 Tumor suppressor gene p24.3 Seq+ 93745 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF727-SND1 ZNF727 chr7 64045624 + SND1 chr7 128074502 + Exonic hg38 LUAD TCGA-55-7995-01A 57 89 In-Frame Intra-chr q11.21 Transcription factor q32.1 Seq+ 93746 ChimerSeq TCGA FAWG TCGA_RNA-Seq XRCC2-ACTR3C XRCC2 chr7 152676041 - ACTR3C chr7 150249054 - Exonic hg38 LUAD TCGA-55-7995-01A 6 5 In-Frame Intra-chr q36.1 Oncogene q36.1 Seq+ 93747 ChimerSeq TCGA FAWG TCGA_RNA-Seq HERC3-RASGEF1B HERC3 chr4 88606049 + RASGEF1B chr4 81602922 - Exonic hg38 LUAD TCGA-55-7995-01A 2 11 CDS-5'UTR Intra-chr q22.1 q21.22 93748 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPNPEP3-EFCAB6 XPNPEP3 chr22 40870139 + EFCAB6 chr22 43683855 - Exonic hg38 LUAD TCGA-55-7995-01A 1 8 3'UTR-CDS Intra-chr q13.2 q13.31 93749 ChimerSeq TCGA FAWG TCGA_RNA-Seq DMKN-NUMBL DMKN chr19 35510184 - NUMBL chr19 40686995 - Exonic hg38 LUAD TCGA-55-7995-01A 1 3 In-Frame Intra-chr q13.12 q13.2 93750 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIMS1-PTP4A2 LIMS1 chr2 108534594 + PTP4A2 chr1 31919658 - Exonic hg38 LUAD TCGA-55-7995-01A 1 3 CDS-5'UTR Inter-chr q12.3 p35.2 93751 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHP1-RAD51 CHP1 chr15 41270618 + RAD51 chr15 40718805 + Exonic hg38 LUAD TCGA-55-8085-01A 10 29 In-Frame Intra-chr q15.1 q15.1 Seq+ 93752 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBRM1-TMEM110 PBRM1 chr3 52550421 - TMEM110 chr3 52855444 - Exonic hg38 LUAD TCGA-55-8085-01A 7 21 Out-of-frame Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 Seq+ 93753 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KA1-LIN28A RPS6KA1 chr1 26558937 + LIN28A chr1 26425303 + Exonic hg38 LUAD TCGA-55-8085-01A 7 21 3'UTR-CDS Intra-chr p36.11 Transcription factor Seq+ 93754 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFCP2L1-CLASP1 TFCP2L1 chr2 121246818 - CLASP1 chr2 121461193 - Exonic hg38 LUAD TCGA-55-8085-01A 3 13 In-Frame Intra-chr q14.2 Transcription factor q14.3 Seq+ 93755 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPD52L2-PDZRN4 TPD52L2 chr20 63869441 + PDZRN4 chr12 41506456 + Exonic hg38 LUAD TCGA-55-8087-01A 15 188 In-Frame Inter-chr q13.33 q12 Seq+ 93756 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASXL1-RPL37P1 ASXL1 chr20 32360853 + RPL37P1 chr20 35588396 + Exonic hg38 LUAD TCGA-55-8087-01A 4 47 Out-of-frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.22 93757 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS53-ZZEF1 VPS53 chr17 697418 - ZZEF1 chr17 4124051 - Exonic hg38 LUAD TCGA-55-8087-01A 4 10 5'UTR-CDS Intra-chr Tumor suppressor gene p13.2 Seq+ 93758 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTR5-ZNF217 ACTR5 chr20 38766377 + ZNF217 chr20 53571853 - Exonic hg38 LUAD TCGA-55-8087-01A 1 4 Out-of-frame Intra-chr q11.23 q13.2 Oncogene Transcription factor 93759 ChimerSeq TCGA FAWG TCGA_RNA-Seq HAS2-HHLA1 HAS2 chr8 121640853 - HHLA1 chr8 132100134 - Exonic hg38 LUAD TCGA-55-8089-01A 26 115 5'UTR-CDS Intra-chr q24.13 q24.22 Seq+ 93760 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL7-DNAH11 KLHL7 chr7 23106146 + DNAH11 chr7 21545006 + Exonic hg38 LUAD TCGA-55-8089-01A 12 122 In-Frame Intra-chr p15.3 p15.3 Seq+ 93761 ChimerSeq TCGA FAWG TCGA_RNA-Seq VOPP1-RAPGEF5 VOPP1 chr7 55572271 - RAPGEF5 chr7 22318037 - Exonic hg38 LUAD TCGA-55-8089-01A 1 26 In-Frame Intra-chr p11.2 p15.3 Seq+ 93762 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNS3-PSPH TNS3 chr7 47582051 - PSPH chr7 56019734 - Exonic hg38 LUAD TCGA-55-8089-01A 2 8 5'UTR-CDS Intra-chr p12.3 p11.2 Seq+ 93763 ChimerSeq TCGA FAWG TCGA_RNA-Seq STEAP1B-POU6F2 STEAP1B chr7 22492565 - POU6F2 chr7 39085860 + Exonic hg38 LUAD TCGA-55-8089-01A 2 6 In-Frame Intra-chr p15.3 p14.1 Tumor suppressor gene Transcription factor Seq+ 93764 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSAP-FMNL2 GSAP chr7 77349351 - FMNL2 chr2 152521943 + Exonic hg38 LUAD TCGA-55-8090-01A 1 12 In-Frame Inter-chr q11.23 q23.3 93765 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM24-NTRK2 TRIM24 chr7 138573642 + NTRK2 chr9 84867243 + Exonic hg38 LUAD TCGA-55-8091-01A 2 18 In-Frame Inter-chr q33 Oncogene Tumor suppressor gene q21.33 Oncogene Seq+ 93766 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGB6-SH3PXD2B ITGB6 chr2 160169212 - SH3PXD2B chr5 172422496 - Exonic hg38 LUAD TCGA-55-8091-01A 1000 1000 In-Frame Inter-chr q24.2 q35.1 93767 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTUS1-FGL1 MTUS1 chr8 17713214 - FGL1 chr8 17869004 - Exonic hg38 LUAD TCGA-55-8094-01A 67 166 In-Frame Intra-chr p22 Tumor suppressor gene p22 Seq+ 93768 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNLT3-U2AF2 DYNLT3 chrX 37841028 - U2AF2 chr19 55668507 + Exonic hg38 LUAD TCGA-55-8094-01A 10 82 In-Frame Inter-chr p11.4 q13.42 Seq+ 93769 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLAUR-XRCC1 PLAUR chr19 43652225 - XRCC1 chr19 43546106 - Exonic hg38 LUAD TCGA-55-8094-01A 2 2 In-Frame Intra-chr q13.31 q13.31 Seq+ 93770 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRMT1-GCDH TRMT1 chr19 13115279 - GCDH chr19 12900234 + Exonic hg38 LUAD TCGA-55-8094-01A 1 5 CDS-3'UTR Intra-chr p13.13 p13.13 93771 ChimerSeq TCGA FAWG TCGA_RNA-Seq BICD1-NAPB BICD1 chr12 32107544 + NAPB chr20 23381317 - Exonic hg38 LUAD TCGA-55-8094-01A 1 3 In-Frame Inter-chr p11.21 p11.21 93772 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN12-GGNBP2 PTPN12 chr7 77639324 + GGNBP2 chr17 36567663 + Exonic hg38 LUAD TCGA-55-8096-01A 3 19 3'UTR-3'UTR Inter-chr q11.23 Tumor suppressor gene Tumor suppressor gene Seq+ 93773 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4K5-NIN MAP4K5 chr14 50464052 - NIN chr14 50752733 - Exonic hg38 LUAD TCGA-55-8096-01A 1 4 In-Frame Intra-chr q22.1 q22.1 Oncogene Seq+ 93774 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSS-TTI1 GSS chr20 34941713 - TTI1 chr20 37999328 - Exonic hg38 LUAD TCGA-55-8097-01A 1 9 Out-of-frame Intra-chr q11.22 q11.23 93775 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD6-TSHZ2 CHD6 chr20 41618340 - TSHZ2 chr20 53253499 + Exonic hg38 LUAD TCGA-55-8097-01A 1 1 5'UTR-CDS Intra-chr q12 q13.2 Transcription factor Seq+ 93776 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTB-RAB15 SPTB chr14 64796557 - RAB15 chr14 64948733 - Exonic hg38 LUAD TCGA-55-8205-01A 1 2 In-Frame Intra-chr q23.3 q23.3 Seq+ 93777 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF20-ZFAS1 PHF20 chr20 35801605 + ZFAS1 chr20 49289045 + Exonic hg38 LUAD TCGA-55-8206-01A 18 374 CDS-5'UTR Intra-chr q11.22 Transcription factor q13.13 Tumor suppressor gene Seq+ 93778 ChimerSeq TCGA FAWG TCGA_RNA-Seq DZANK1-DTD1 DZANK1 chr20 18448984 - DTD1 chr20 18763360 + Exonic hg38 LUAD TCGA-55-8206-01A 27 179 3'UTR-3'UTR Intra-chr p11.23 p11.23 Seq+ 93779 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSTN-DZANK1 DSTN chr20 17570211 + DZANK1 chr20 18455361 - Exonic hg38 LUAD TCGA-55-8206-01A 11 83 Out-of-frame Intra-chr p12.1 p11.23 Seq+ 93780 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPNE1-GNAS CPNE1 chr20 35664760 - GNAS chr20 58903531 + Exonic hg38 LUAD TCGA-55-8206-01A 10 33 5'UTR-CDS Intra-chr q11.22 q13.32 Oncogene Seq+ 93781 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM12-GNAS RBM12 chr20 35664760 - GNAS chr20 58903531 + Exonic hg38 LUAD TCGA-55-8206-01A 10 33 5'UTR-CDS Intra-chr q11.22 q13.32 Oncogene Seq+ 93782 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS4-PHF20 BCAS4 chr20 50841900 + PHF20 chr20 35913249 + Exonic hg38 LUAD TCGA-55-8206-01A 7 37 Out-of-frame Intra-chr q13.13 q11.22 Transcription factor Seq+ 93783 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK5RAP1-GNAS CDK5RAP1 chr20 33392143 - GNAS chr20 58903527 + Exonic hg38 LUAD TCGA-55-8206-01A 4 32 Out-of-frame Intra-chr q11.21 q13.32 Oncogene Seq+ 93784 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXD2-GMEB2 EXD2 chr14 69209803 + GMEB2 chr20 63619454 - Exonic hg38 LUAD TCGA-55-8206-01A 2 2 5'UTR-5'UTR Inter-chr q24.1 q13.33 Transcription factor Seq+ 93785 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRT-EXD2 PTPRT chr20 42756462 - EXD2 chr14 69228816 + Exonic hg38 LUAD TCGA-55-8206-01A 1 4 Out-of-frame Inter-chr q13.11 Oncogene Tumor suppressor gene q24.1 Seq+ 93786 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL26-CYSTM1 RPL26 chr17 8382143 - CYSTM1 chr5 140194446 + Exonic hg38 LUAD TCGA-55-8207-01A 80 350 CDS-5'UTR Inter-chr p13.1 q31.3 Seq+ 93787 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMAN2-F12 LMAN2 chr5 177334284 - F12 chr5 177404090 - Exonic hg38 LUAD TCGA-55-8299-01A 38 66 In-Frame Intra-chr q35.3 q35.3 Seq+ 93788 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHPN2-VSTM2B RHPN2 chr19 33064784 - VSTM2B chr19 29563846 + Exonic hg38 LUAD TCGA-55-8301-01A 2 16 Out-of-frame Intra-chr q13.11 q12 Seq+ 93789 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF1-POC1A DCAF1 chr3 51463114 - POC1A chr3 52151100 - Exonic hg38 LUAD TCGA-55-8301-01A 3 5 In-Frame Intra-chr p21.2 p21.2 93790 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCM7-TSC22D4 MCM7 chr7 100095774 - TSC22D4 chr7 100467600 - Exonic hg38 LUAD TCGA-55-8301-01A 1 4 In-Frame Intra-chr q22.1 q22.1 93791 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD2-PRSS50 SETD2 chr3 47163854 - PRSS50 chr3 46720003 - Exonic hg38 LUAD TCGA-55-8301-01A 1 4 5'UTR-5'UTR Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 93792 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCA4-DOCK6 SMARCA4 chr19 11019701 + DOCK6 chr19 11201052 - Exonic hg38 LUAD TCGA-55-8505-01A 27 108 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 93793 ChimerSeq TCGA FAWG TCGA_RNA-Seq RDH13-PPP6R1 RDH13 chr19 55056653 - PPP6R1 chr19 55247109 - Exonic hg38 LUAD TCGA-55-8505-01A 3 45 5'UTR-5'UTR Intra-chr q13.42 Seq+ 93794 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS8L2-DCDC1 EPS8L2 chr11 710486 + DCDC1 chr11 31137784 - Exonic hg38 LUAD TCGA-55-8505-01A 5 27 In-Frame Intra-chr p15.5 p13 93795 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCNX1-RAD51B PCNX1 chr14 70908003 + RAD51B chr14 68291884 + Exonic hg38 LUAD TCGA-55-8506-01A 22 312 In-Frame Intra-chr q24.2 q24.1 93796 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP107-SHD NUP107 chr12 68715740 + SHD chr19 4290447 + Exonic hg38 LUAD TCGA-55-8506-01A 6 32 Out-of-frame Inter-chr q15 p13.3 Seq+ 93797 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAMSTR-SULT2B1 MAMSTR chr19 48713716 - SULT2B1 chr19 48599135 + Exonic hg38 LUAD TCGA-55-8506-01A 2 46 In-Frame Intra-chr q13.33 q13.33 Seq+ 93798 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGSM3-TNRC6B SGSM3 chr22 40408842 + TNRC6B chr22 40300455 + Exonic hg38 LUAD TCGA-55-8506-01A 7 25 In-Frame Intra-chr q13.1 q13.1 Seq+ 93799 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR34-ZER1 WDR34 chr9 128656541 - ZER1 chr9 128733528 - Exonic hg38 LUAD TCGA-55-8506-01A 2 25 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 93800 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFI6-STPG1 IFI6 chr1 27668226 - STPG1 chr1 24391679 - Exonic hg38 LUAD TCGA-55-8507-01A 16 84 In-Frame Intra-chr p35.3 p36.11 Seq+ 93801 ChimerSeq TCGA FAWG TCGA_RNA-Seq RICTOR-DTNBP1 RICTOR chr5 39074111 - DTNBP1 chr6 15593081 - Exonic hg38 LUAD TCGA-55-8507-01A 7 38 Out-of-frame Inter-chr p13.1 p22.3 Seq+ 93802 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB40-VPS13D ZBTB40 chr1 22522463 + VPS13D chr1 12234191 + Exonic hg38 LUAD TCGA-55-8507-01A 1 6 CDS-5'UTR Intra-chr p36.12 Transcription factor p36.22 Seq+ 93803 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK38L-TMPRSS12 STK38L chr12 27319423 + TMPRSS12 chr12 50843842 + Exonic hg38 LUAD TCGA-55-8507-01A 1 2 Out-of-frame Intra-chr p11.23 q13.12 93804 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNC1-IGHJ5 PITPNC1 chr17 67552340 + IGHJ5 chr14 105863854 - Exonic hg38 LUAD TCGA-55-8508-01A 9 0 Out-of-frame Inter-chr q24.2 93805 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTUS1-FGL1 MTUS1 chr8 17713214 - FGL1 chr8 17885571 - Exonic hg38 LUAD TCGA-55-8508-01A 3 22 CDS-5'UTR Intra-chr p22 Tumor suppressor gene p22 Seq+ 93806 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIPK3-CAT HIPK3 chr11 33352265 + CAT chr11 34449192 + Exonic hg38 LUAD TCGA-55-8510-01A 2 7 In-Frame Intra-chr p13 CMGC:DYRK p13 Tumor suppressor gene Seq+ 93807 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCYL1-FRMD8 SCYL1 chr11 65532805 + FRMD8 chr11 65411242 + Exonic hg38 LUAD TCGA-55-8510-01A 1 10 Out-of-frame Intra-chr q13.1 Other:SCY1 Tumor suppressor gene q13.1 Seq+ 93808 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC12A7-ZDHHC11B SLC12A7 chr5 1073633 - ZDHHC11B chr5 745298 - Exonic hg38 LUAD TCGA-55-8510-01A 1 10 5'UTR-CDS Intra-chr p15.33 p15.33 93809 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALT3-BCAS3 B4GALT3 chr1 161177423 - BCAS3 chr17 61084467 + Exonic hg38 LUAD TCGA-55-8511-01A 16 93 5'UTR-CDS Inter-chr q23.3 q23.2 Seq+ 93810 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNF4G-TPD52 HNF4G chr8 75407964 + TPD52 chr8 80064593 - Exonic hg38 LUAD TCGA-55-8511-01A 3 6 5'UTR-CDS Intra-chr q21.13 Transcription factor q21.13 93811 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC8-GREB1L TRAPPC8 chr18 31890735 - GREB1L chr18 21434947 + Exonic hg38 LUAD TCGA-55-8511-01A 1 4 Out-of-frame Intra-chr q12.1 q11.1 93812 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALG11-ZFYVE28 ALG11 chr13 52012462 + ZFYVE28 chr4 2274216 - Exonic hg38 LUAD TCGA-55-8513-01A 2 1 In-Frame Inter-chr q14.3 p16.3 Seq+ 93813 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPNE1-ZNF618 CPNE1 chr20 35664802 - ZNF618 chr9 113969117 + Exonic hg38 LUAD TCGA-55-8614-01A 1 7 5'UTR-CDS Inter-chr q11.22 q32 Transcription factor 93814 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM12-ZNF618 RBM12 chr20 35664802 - ZNF618 chr9 113969117 + Exonic hg38 LUAD TCGA-55-8614-01A 1 7 5'UTR-CDS Inter-chr q11.22 q32 Transcription factor 93815 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEAD1-ARNTL TEAD1 chr11 12675561 + ARNTL chr11 13365500 + Exonic hg38 LUAD TCGA-55-8614-01A 1 6 5'UTR-5'UTR Intra-chr p15.3 Transcription factor p15.3 Tumor suppressor gene Transcription factor 93816 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF7L1-BRMS1L TCF7L1 chr2 85307914 + BRMS1L chr14 35871516 + Exonic hg38 LUAD TCGA-55-8615-01A 17 64 Out-of-frame Inter-chr p11.2 Oncogene Transcription factor q13.2 Seq+ 93817 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCEE-ANXA4 MCEE chr2 71129717 - ANXA4 chr2 69781520 + Exonic hg38 LUAD TCGA-55-8615-01A 6 29 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 93818 ChimerSeq TCGA FAWG TCGA_RNA-Seq YPEL2-HEATR6 YPEL2 chr17 59389468 + HEATR6 chr17 60067732 - Exonic hg38 LUAD TCGA-55-8615-01A 3 19 In-Frame Intra-chr q22 q23.1 Seq+ 93819 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB1B-MTMR2 RAB1B chr11 66268693 + MTMR2 chr11 95865676 - Exonic hg38 LUAD TCGA-55-8615-01A 4 8 Out-of-frame Intra-chr q13.2 q21 Seq+ 93820 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNS3-ELMO1 TNS3 chr7 47411727 - ELMO1 chr7 36895017 - Exonic hg38 LUAD TCGA-55-8615-01A 1 10 In-Frame Intra-chr p12.3 p14.1 Seq+ 93821 ChimerSeq TCGA FAWG TCGA_RNA-Seq FIP1L1-SORCS1 FIP1L1 chr4 53399839 + SORCS1 chr10 106730114 - Exonic hg38 LUAD TCGA-55-8615-01A 1 5 In-Frame Inter-chr q12 q25.1 Seq+ 93822 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED25-SIGLEC12 MED25 chr19 49819296 + SIGLEC12 chr19 51491829 - Exonic hg38 LUAD TCGA-55-8620-01A 26 56 Out-of-frame Intra-chr q13.33 q13.41 Seq+ 93823 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMCO3-ST7 TMCO3 chr13 113491273 + ST7 chr7 117099762 + Exonic hg38 LUAD TCGA-55-8620-01A 4 11 5'UTR-5'UTR Inter-chr q34 q31.2 Tumor suppressor gene Seq+ 93824 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAPGEF1-MED27 RAPGEF1 chr9 131739770 - MED27 chr9 131893992 - Exonic hg38 LUAD TCGA-55-8620-01A 4 6 Out-of-frame Intra-chr q34.13 q34.13 Seq+ 93825 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDC-KIAA0040 DDC chr7 50503993 - KIAA0040 chr1 175166737 - Exonic hg38 LUAD TCGA-55-8620-01A 1 11 CDS-5'UTR Inter-chr p12.1 q25.1 93826 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM132D-RALGAPA2 TMEM132D chr12 129531059 - RALGAPA2 chr20 20412148 - Exonic hg38 LUAD TCGA-55-8620-01A 2 6 In-Frame Inter-chr q24.33 p11.23 Seq+ 93827 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KC1-SDCCAG8 RPS6KC1 chr1 213071041 + SDCCAG8 chr1 243330540 + Exonic hg38 LUAD TCGA-55-8620-01A 2 4 CDS-3'UTR Intra-chr q32.3 Seq+ 93828 ChimerSeq TCGA FAWG TCGA_RNA-Seq FARS2-AKR1E2 FARS2 chr6 5261660 + AKR1E2 chr10 4830675 + Exonic hg38 LUAD TCGA-55-8620-01A 1 6 5'UTR-5'UTR Inter-chr p25.1 p15.1 Seq+ 93829 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADPRHL1-TFDP1 ADPRHL1 chr13 113407956 - TFDP1 chr13 113585774 + Exonic hg38 LUAD TCGA-55-8620-01A 1000 1000 3'UTR-5'UTR Intra-chr q34 q34 Transcription factor Seq+ 93830 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCID2-TMCO3 PCID2 chr13 113190872 - TMCO3 chr13 113547300 + Exonic hg38 LUAD TCGA-55-8620-01A 1000 1000 In-Frame Intra-chr q34 q34 Seq+ 93831 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAD1-RNLS ATAD1 chr10 87814438 - RNLS chr10 88362725 - Exonic hg38 LUAD TCGA-55-A48Y-01A 13 40 Out-of-frame Intra-chr q23.31 Seq+ 93832 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD2-QRICH1 SETD2 chr3 47163854 - QRICH1 chr3 49033228 - Exonic hg38 LUAD TCGA-55-A48Y-01A 13 34 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Seq+ 93833 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLPP1-ANKRD55 PLPP1 chr5 55441851 - ANKRD55 chr5 56127106 - Exonic hg38 LUAD TCGA-55-A48Y-01A 12 24 In-Frame Intra-chr q11.2 q11.2 93834 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTGR1-C9orf84 PTGR1 chr9 111592926 - C9orf84 chr9 111694362 - Exonic hg38 LUAD TCGA-55-A48Y-01A 7 38 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 93835 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC7-C16orf74 ZDHHC7 chr16 84977095 - C16orf74 chr16 85710285 - Exonic hg38 LUAD TCGA-55-A48Y-01A 7 37 CDS-3'UTR Intra-chr q24.1 q24.1 Seq+ 93836 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC16A3-AKAP10 SLC16A3 chr17 82229106 + AKAP10 chr17 19924517 - Exonic hg38 LUAD TCGA-55-A48Y-01A 3 8 5'UTR-CDS Intra-chr q25.3 p11.2 Seq+ 93837 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENTPD5-ALDH6A1 ENTPD5 chr14 73970010 - ALDH6A1 chr14 74075017 - Exonic hg38 LUAD TCGA-55-A48Y-01A 2 7 In-Frame Intra-chr q24.3 q24.3 Seq+ 93838 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETHE1-ZNF235 ETHE1 chr19 43526201 - ZNF235 chr19 44236729 - Exonic hg38 LUAD TCGA-55-A48Y-01A 2 4 CDS-3'UTR Intra-chr q13.31 q13.31 Transcription factor Seq+ 93839 ChimerSeq TCGA FAWG TCGA_RNA-Seq EML2-DMWD EML2 chr19 45617630 - DMWD chr19 45786871 - Exonic hg38 LUAD TCGA-55-A48Y-01A 1 5 Out-of-frame Intra-chr q13.32 q13.32 Seq+ 93840 ChimerSeq TCGA FAWG TCGA_RNA-Seq STIM2-SPIDR STIM2 chr4 27017984 + SPIDR chr8 47279862 + Exonic hg38 LUAD TCGA-55-A48Z-01A 2 7 Out-of-frame Inter-chr p15.2 q11.21 93841 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3AP1-NDRG1 PIK3AP1 chr10 96709567 - NDRG1 chr8 133284329 - Exonic hg38 LUAD TCGA-55-A490-01A 2 2 CDS-5'UTR Inter-chr q24.1 q24.22 Tumor suppressor gene 93842 ChimerSeq TCGA FAWG TCGA_RNA-Seq WARS2-DLG2 WARS2 chr1 119140555 - DLG2 chr11 85154651 - Exonic hg38 LUAD TCGA-55-A490-01A 1 4 In-Frame Inter-chr p12 q14.1 Seq+ 93843 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARVA-MICALCL PARVA chr11 12377783 + MICALCL chr11 12319696 + Exonic hg38 LUAD TCGA-55-A491-01A 2 13 In-Frame Intra-chr p15.3 p15.3 Seq+ 93844 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBF2-PDE3B SBF2 chr11 10028452 - PDE3B chr11 14771937 + Exonic hg38 LUAD TCGA-55-A491-01A 1 9 Out-of-frame Intra-chr p15.4 p15.2 Seq+ 93845 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPINT2-MAP4K1 SPINT2 chr19 38290575 + MAP4K1 chr19 38597137 - Exonic hg38 LUAD TCGA-55-A492-01A 48 190 CDS-5'UTR Intra-chr q13.2 Tumor suppressor gene Tumor suppressor gene Seq+ 93846 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFTPB-TPT1 SFTPB chr2 85661454 - TPT1 chr13 45337388 - Exonic hg38 LUAD TCGA-55-A492-01A 1 7 3'UTR-CDS Inter-chr p11.2 q14.13 Seq+ 93847 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPN5-PELI3 CAPN5 chr11 77093813 + PELI3 chr11 66472369 + Exonic hg38 LUAD TCGA-55-A492-01A 1 3 In-Frame Intra-chr q13.5 q13.2 Seq+ 93848 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMC5-HN1 TMC5 chr16 19430640 + HN1 chr17 75148671 - Exonic hg38 LUAD TCGA-55-A493-01A 30 108 Out-of-frame Inter-chr p12.3 Seq+ 93849 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2G2-GART UBE2G2 chr21 44777299 - GART chr21 33525000 - Exonic hg38 LUAD TCGA-55-A493-01A 7 49 In-Frame Intra-chr q22.3 Seq+ 93850 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBB2A-SLC22A23 TUBB2A chr6 3155625 - SLC22A23 chr6 3324002 - Exonic hg38 LUAD TCGA-55-A493-01A 5 17 In-Frame Intra-chr p25.2 p25.2 Seq+ 93851 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXNA3-TKTL1 PLXNA3 chrX 154470611 + TKTL1 chrX 154305304 + Exonic hg38 LUAD TCGA-55-A493-01A 2 12 In-Frame Intra-chr q28 q28 Seq+ 93852 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWTR1-ANKUB1 WWTR1 chr3 149656876 - ANKUB1 chr3 149761613 - Exonic hg38 LUAD TCGA-55-A493-01A 2 6 In-Frame Intra-chr q25.1 q25.1 Seq+ 93853 ChimerSeq TCGA FAWG TCGA_RNA-Seq NECTIN2-IGSF23 NECTIN2 chr19 44846613 + IGSF23 chr19 44623707 + Exonic hg38 LUAD TCGA-55-A493-01A 1 8 Out-of-frame Intra-chr q13.32 q13.31 93854 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF21A-SLC2A13 KIF21A chr12 39442927 - SLC2A13 chr12 39871961 - Exonic hg38 LUAD TCGA-55-A493-01A 2 3 In-Frame Intra-chr q12 q12 Seq+ 93855 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARP14-TASP1 PARP14 chr3 122701635 + TASP1 chr20 13559114 - Exonic hg38 LUAD TCGA-55-A493-01A 1 5 Out-of-frame Inter-chr q21.1 p12.1 Seq+ 93856 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALNT3-LMO3 B4GALNT3 chr12 460545 + LMO3 chr12 16600868 - Exonic hg38 LUAD TCGA-55-A493-01A 1 4 In-Frame Intra-chr p13.33 p12.3 93857 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA3-C18orf8 LAMA3 chr18 23714072 + C18orf8 chr18 23529179 + Exonic hg38 LUAD TCGA-55-A493-01A 1 1 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 93858 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTUS2-PIBF1 MTUS2 chr13 28839850 + PIBF1 chr13 72893784 + Exonic hg38 LUAD TCGA-55-A494-01A 1 16 5'UTR-5'UTR Intra-chr q12.3 q21.33 93859 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGB4-TSPAN10 ITGB4 chr17 75751111 + TSPAN10 chr17 81644992 + Exonic hg38 LUAD TCGA-55-A4DF-01A 3 3 Out-of-frame Intra-chr q25.1 q25.3 Seq+ 93860 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPOP-LIMA1 SPOP chr17 49618981 - LIMA1 chr12 50222485 - Exonic hg38 LUAD TCGA-55-A4DG-01A 6 28 In-Frame Inter-chr q21.33 Oncogene Tumor suppressor gene q13.12 Tumor suppressor gene Seq+ 93861 ChimerSeq TCGA FAWG TCGA_RNA-Seq THUMPD2-VSNL1 THUMPD2 chr2 39779114 - VSNL1 chr2 17649410 + Exonic hg38 LUAD TCGA-55-A4DG-01A 3 14 In-Frame Intra-chr p22.1 p24.2 Tumor suppressor gene Seq+ 93862 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP5-AKAP6 ARHGAP5 chr14 32094386 + AKAP6 chr14 32535554 + Exonic hg38 LUAD TCGA-55-A4DG-01A 1 6 In-Frame Intra-chr q12 q12 93863 ChimerSeq TCGA FAWG TCGA_RNA-Seq NR1D2-UBE2E2 NR1D2 chr3 23962605 + UBE2E2 chr3 23532554 + Exonic hg38 LUAD TCGA-55-A57B-01A 4 7 In-Frame Intra-chr p24.2 Transcription factor p24.3 Seq+ 93864 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELSR1-CD52 CELSR1 chr22 46463707 - CD52 chr1 26320171 + Exonic hg38 LUAD TCGA-62-8394-01A 81 308 Out-of-frame Inter-chr q13.31 p36.11 Seq+ 93865 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM83G-TRIM16 FAM83G chr17 18988247 - TRIM16 chr17 15642816 - Exonic hg38 LUAD TCGA-62-8394-01A 1 12 In-Frame Intra-chr p11.2 p12 Seq+ 93866 ChimerSeq TCGA FAWG TCGA_RNA-Seq NKAIN1-PFAS NKAIN1 chr1 31239494 - PFAS chr17 8254166 + Exonic hg38 LUAD TCGA-62-8394-01A 1 2 Out-of-frame Inter-chr p35.2 p13.1 Seq+ 93867 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBNL1-SGSM3 MBNL1 chr3 152432920 + SGSM3 chr22 40400696 + Exonic hg38 LUAD TCGA-62-8395-01A 11 28 CDS-5'UTR Inter-chr q25.1 q13.1 Seq+ 93868 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP45-STK11 ARHGAP45 chr19 1066163 + STK11 chr19 1218417 + Exonic hg38 LUAD TCGA-62-8395-01A 6 14 Out-of-frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene 93869 ChimerSeq TCGA FAWG TCGA_RNA-Seq YWHAE-RTN4RL1 YWHAE chr17 1400047 - RTN4RL1 chr17 1937808 - Exonic hg38 LUAD TCGA-62-8395-01A 4 21 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 93870 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK11-SRFBP1 STK11 chr19 1207203 + SRFBP1 chr5 122019260 + Exonic hg38 LUAD TCGA-62-8395-01A 5 5 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene q23.1 Seq+ 93871 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGC-UBB PGC chr6 41740575 - UBB chr17 16381114 + Exonic hg38 LUAD TCGA-62-8395-01A 3 5 Out-of-frame Inter-chr p21.1 p11.2 Seq+ 93872 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGSM3-C22orf46 SGSM3 chr22 40370688 + C22orf46 chr22 41690784 + Exonic hg38 LUAD TCGA-62-8395-01A 1 3 5'UTR-5'UTR Intra-chr q13.1 q13.2 93873 ChimerSeq TCGA FAWG TCGA_RNA-Seq YAP1-C11orf70 YAP1 chr11 102114394 + C11orf70 chr11 102081215 + Exonic hg38 LUAD TCGA-62-A46O-01A 9 17 Out-of-frame Intra-chr q22.1 Tumor suppressor gene q22.1 Seq+ 93874 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV6-PLEKHG6 ETV6 chr12 11650160 + PLEKHG6 chr12 6315005 + Exonic hg38 LUAD TCGA-62-A46O-01A 6 17 In-Frame Intra-chr p13.2 Tumor suppressor gene Transcription factor p13.31 Seq+ 93875 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM69-MAST2 TMEM69 chr1 45688275 + MAST2 chr1 45824433 + Exonic hg38 LUAD TCGA-62-A46O-01A 1 13 5'UTR-CDS Intra-chr p34.1 p34.1 AGC:MAST 93876 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBP7-NMNAT1 RBP7 chr1 10007748 + NMNAT1 chr1 9972018 + Exonic hg38 LUAD TCGA-62-A46O-01A 1 4 5'UTR-5'UTR Intra-chr p36.22 p36.22 93877 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELMO3-C16orf70 ELMO3 chr16 67200361 + C16orf70 chr16 67139984 + Exonic hg38 LUAD TCGA-62-A46O-01A 1 1 Out-of-frame Intra-chr q22.1 q22.1 93878 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFTPB-WDR13 SFTPB chr2 85665289 - WDR13 chrX 48601784 + Exonic hg38 LUAD TCGA-62-A46P-01A 1 3 In-Frame Inter-chr p11.2 p11.23 93879 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSR1-FARS2 SSR1 chr6 7303550 - FARS2 chr6 5545180 + Exonic hg38 LUAD TCGA-62-A46S-01A 110 635 In-Frame Intra-chr p24.3 p25.1 Seq+ 93880 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM64-HHLA1 TMEM64 chr8 90645111 - HHLA1 chr8 132065968 - Exonic hg38 LUAD TCGA-62-A46S-01A 15 18 Out-of-frame Intra-chr q21.3 q24.22 Seq+ 93881 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUMA1-DHCR7 NUMA1 chr11 72006035 - DHCR7 chr11 71439083 - Exonic hg38 LUAD TCGA-62-A46S-01A 12 27 Out-of-frame Intra-chr q13.4 Oncogene q13.4 Seq+ 93882 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM64-OC90 TMEM64 chr8 90645111 - OC90 chr8 132045883 - Exonic hg38 LUAD TCGA-62-A46S-01A 2 30 Out-of-frame Intra-chr q21.3 q24.22 Seq+ 93883 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATAD2B-DCAF8 GATAD2B chr1 153922733 - DCAF8 chr1 160240370 - Exonic hg38 LUAD TCGA-62-A46U-01A 4 151 5'UTR-CDS Intra-chr Transcription factor q23.2 Seq+ 93884 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFTUD2-C1QL1 EFTUD2 chr17 44867807 - C1QL1 chr17 44960367 - Exonic hg38 LUAD TCGA-62-A46U-01A 7 22 In-Frame Intra-chr q21.31 q21.31 Seq+ 93885 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTMR3-SCNN1B MTMR3 chr22 29971062 + SCNN1B chr16 23348592 + Exonic hg38 LUAD TCGA-62-A46U-01A 3 18 CDS-5'UTR Inter-chr q12.2 p12.2 Seq+ 93886 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARMC7-NUP85 ARMC7 chr17 75110606 + NUP85 chr17 75225103 + Exonic hg38 LUAD TCGA-62-A46U-01A 2 8 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 93887 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSI2-NPEPPS MSI2 chr17 57258354 + NPEPPS chr17 47590717 + Exonic hg38 LUAD TCGA-62-A46U-01A 2 6 In-Frame Intra-chr q22 q21.32 Seq+ 93888 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARVELD2-WDR19 MARVELD2 chr5 69420531 + WDR19 chr4 39285487 + Exonic hg38 LUAD TCGA-62-A46V-01A 10 35 3'UTR-3'UTR Inter-chr q13.2 p14 Seq+ 93889 ChimerSeq TCGA FAWG TCGA_RNA-Seq NECTIN2-ZMAT2 NECTIN2 chr19 44874478 + ZMAT2 chr5 140703918 + Exonic hg38 LUAD TCGA-62-A46V-01A 3 5 Out-of-frame Inter-chr q13.32 q31.3 93890 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC34A2-ROS1 SLC34A2 chr4 25676702 + ROS1 chr6 117329446 - Exonic hg38 LUAD TCGA-62-A46Y-01A 108 1064 Out-of-frame Inter-chr p15.2 q22.1 Oncogene KB Pub Seq+ 93891 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTMA-SAP30BP PTMA chr2 231711419 + SAP30BP chr17 75690671 + Exonic hg38 LUAD TCGA-62-A471-01A 1 9 In-Frame Inter-chr q37.1 q25.1 93892 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAG5-SYTL1 SPAG5 chr17 28584150 - SYTL1 chr1 27353713 + Exonic hg38 LUAD TCGA-62-A471-01A 1 1 Out-of-frame Inter-chr q11.2 p36.11 93893 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2orf42-BCL11A C2orf42 chr2 70248405 - BCL11A chr2 60516518 - Exonic hg38 LUAD TCGA-64-1676-01A 3 41 Out-of-frame Intra-chr p13.3 p16.1 Oncogene Transcription factor 93894 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIA1-BCL11A TIA1 chr2 70248405 - BCL11A chr2 60516518 - Exonic hg38 LUAD TCGA-64-1676-01A 3 41 5'UTR-CDS Intra-chr p13.3 p16.1 Oncogene Transcription factor Seq+ 93895 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYH9-ORAOV1 MYH9 chr22 36348904 - ORAOV1 chr11 69673321 - Exonic hg38 LUAD TCGA-64-1678-01A 9 76 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene q13.3 Seq+ 93896 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNAPIN-S100A1 SNAPIN chr1 153659566 + S100A1 chr1 153631698 + Exonic hg38 LUAD TCGA-64-1678-01A 11 53 In-Frame Intra-chr q21.3 q21.3 Seq+ 93897 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIOBP-UNC13C TRIOBP chr22 37769375 + UNC13C chr15 54622327 + Exonic hg38 LUAD TCGA-64-1678-01A 5 23 Out-of-frame Inter-chr q13.1 q21.3 Seq+ 93898 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGHMBP2-C22orf23 IGHMBP2 chr11 68904038 + C22orf23 chr22 37945173 - Exonic hg38 LUAD TCGA-64-1678-01A 2 11 Out-of-frame Inter-chr q13.3 q13.1 Seq+ 93899 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF3L-ORAOV1 EIF3L chr22 37878171 + ORAOV1 chr11 69654384 - Exonic hg38 LUAD TCGA-64-1678-01A 1 5 Out-of-frame Inter-chr q13.1 q13.3 93900 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF253-BAZ1A ZNF253 chr19 19865999 + BAZ1A chr14 34811036 - Exonic hg38 LUAD TCGA-64-1679-01A 2 14 Out-of-frame Inter-chr p13.11 Transcription factor q13.2 Seq+ 93901 ChimerSeq TCGA FAWG TCGA_RNA-Seq UPF2-NUDT5 UPF2 chr10 12042755 - NUDT5 chr10 12172866 - Exonic hg38 LUAD TCGA-64-1679-01A 3 5 5'UTR-CDS Intra-chr p14 p14 Seq+ 93902 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC2A1-ELOVL1 SLC2A1 chr1 42958634 - ELOVL1 chr1 43364794 - Exonic hg38 LUAD TCGA-64-1679-01A 2 7 In-Frame Intra-chr p34.2 p34.2 Seq+ 93903 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPRIN2-NPY4R GPRIN2 chr10 46550438 - NPY4R chr10 46465721 - Exonic hg38 LUAD TCGA-64-1679-01A 1000 1000 Out-of-frame Intra-chr q11.22 q11.22 93904 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2CD3-COA4 C2CD3 chr11 74090813 - COA4 chr11 73873394 - Exonic hg38 LUAD TCGA-64-1679-01A 1000 1000 CDS-5'UTR Intra-chr q13.4 q13.4 93905 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD74-ROS1 CD74 chr5 150404680 - ROS1 chr6 117324415 - Exonic hg38 LUAD TCGA-64-1680-01A 68 224 In-Frame Inter-chr q33.1 q22.1 Oncogene KB Pub Seq+ 93906 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO9-CD74 FBXO9 chr6 53095664 + CD74 chr5 150402625 - Exonic hg38 LUAD TCGA-64-1680-01A 22 110 Out-of-frame Inter-chr p12.1 q33.1 Seq+ 93907 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROS1-FBXO9 ROS1 chr6 117403139 - FBXO9 chr6 53097722 + Exonic hg38 LUAD TCGA-64-1680-01A 1 6 Out-of-frame Intra-chr q22.1 Oncogene p12.1 93908 ChimerSeq TCGA FAWG TCGA_RNA-Seq APOPT1-MARK3 APOPT1 chr14 103563124 + MARK3 chr14 103502882 + Exonic hg38 LUAD TCGA-64-1680-01A 1 3 Out-of-frame Intra-chr q32.33 q32.32 CAMK:CAMKL Seq+ 93909 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGMS1-GAB2 SGMS1 chr10 50327205 - GAB2 chr11 78280901 - Exonic hg38 LUAD TCGA-64-1681-01A 1 8 In-Frame Inter-chr q11.23 Tumor suppressor gene q14.1 Seq+ 93910 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRYL-OCIAD2 FRYL chr4 48710519 - OCIAD2 chr4 48894053 - Exonic hg38 LUAD TCGA-64-5774-01A 22 96 5'UTR-CDS Intra-chr p11 p11 Seq+ 93911 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGHG1-BPIFA1 IGHG1 chr14 105741673 - BPIFA1 chr20 33236003 + Exonic hg38 LUAD TCGA-64-5774-01A 3 18 Out-of-frame Inter-chr q32.33 q11.21 93912 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAST4-GTF2H2B MAST4 chr5 67090231 + GTF2H2B chr5 70441416 + Exonic hg38 LUAD TCGA-64-5774-01A 1 5 CDS-5'UTR Intra-chr q12.3 AGC:MAST q13.2 93913 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSFM-MARCH9 TSFM chr12 57787162 + 2019_ 3_ 9_ chr12 57758108 + Exonic hg38 LUAD TCGA-64-5775-01A 9 38 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 93914 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROR1-DNAJC6 ROR1 chr1 64177989 + DNAJC6 chr1 65364635 + Exonic hg38 LUAD TCGA-64-5775-01A 3 8 In-Frame Intra-chr p31.3 TK:Ror p31.3 KB Pub Seq+ 93915 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDXDC1-NPIPA3 PDXDC1 chr16 15030056 + NPIPA3 chr16 14724318 + Exonic hg38 LUAD TCGA-64-5778-01A 1 15 5'UTR-5'UTR Intra-chr p13.11 93916 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM60A-CD27 FAM60A chr12 31326024 - CD27 chr12 6445424 + Exonic hg38 LUAD TCGA-64-5779-01A 1 81 Out-of-frame Intra-chr p13.31 Seq+ 93917 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLK-ZFHX3 SLK chr10 103967895 + ZFHX3 chr16 72960194 - Exonic hg38 LUAD TCGA-64-5779-01A 1 2 CDS-5'UTR Inter-chr q24.33 STE:STE20 q22.3 Tumor suppressor gene Transcription factor Seq+ 93918 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4K3-HACD4 MAP4K3 chr2 39436892 - HACD4 chr9 21029398 - Exonic hg38 LUAD TCGA-67-3770-01A 1 16 Out-of-frame Inter-chr p22.1 p21.3 Tumor suppressor gene 93919 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF341-FRG1EP ZNF341 chr20 33732052 + FRG1EP chr20 29488213 - Exonic hg38 LUAD TCGA-67-3770-01A 4 3 CDS-3'UTR Intra-chr q11.22 Transcription factor q11.1 93920 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPLP2-TALDO1 RPLP2 chr11 811645 + TALDO1 chr11 755879 + Exonic hg38 LUAD TCGA-67-3771-01A 14 59 3'UTR-CDS Intra-chr p15.5 p15.5 Seq+ 93921 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLIC2-VPS39 CLIC2 chrX 155334371 - VPS39 chr15 42178338 - Exonic hg38 LUAD TCGA-67-3771-01A 10 68 5'UTR-CDS Inter-chr q28 q15.1 Seq+ 93922 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYRK1A-TTC3 DYRK1A chr21 37420384 + TTC3 chr21 37188495 + Exonic hg38 LUAD TCGA-67-3771-01A 2 20 Out-of-frame Intra-chr q22.13 CMGC:DYRK q22.13 Seq+ 93923 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARMC9-EVL ARMC9 chr2 231296253 + EVL chr14 100084687 + Exonic hg38 LUAD TCGA-67-3771-01A 1 4 Out-of-frame Inter-chr q37.1 q32.2 Seq+ 93924 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRHL2-BAALC GRHL2 chr8 101492789 + BAALC chr8 103212919 + Exonic hg38 LUAD TCGA-67-3771-01A 1 3 Out-of-frame Intra-chr q22.3 Transcription factor q22.3 93925 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL9-FGGY OSBPL9 chr1 51669512 + FGGY chr1 59625988 + Exonic hg38 LUAD TCGA-67-3772-01A 1 2 Out-of-frame Intra-chr p32.3 p32.1 93926 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGF13-DACH2 FGF13 chrX 139204059 - DACH2 chrX 86812856 + Exonic hg38 LUAD TCGA-67-3773-01A 3 13 In-Frame Intra-chr q27.1 q21.2 Transcription factor Seq+ 93927 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGA-PBX4 MGA chr15 41669958 + PBX4 chr19 19570833 - Exonic hg38 LUAD TCGA-67-3773-01A 1 9 Out-of-frame Inter-chr q15.1 Transcription factor p13.11 Transcription factor Seq+ 93928 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK2-DLAT MARK2 chr11 63839560 + DLAT chr11 112037273 + Exonic hg38 LUAD TCGA-67-3774-01A 3 42 Out-of-frame Intra-chr q13.1 CAMK:CAMKL q23.1 Seq+ 93929 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS22-SLC9A9 MRPS22 chr3 139352792 + SLC9A9 chr3 143693307 - Exonic hg38 LUAD TCGA-67-3774-01A 6 8 In-Frame Intra-chr q23 q24 Seq+ 93930 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM2-MYRFL R3HDM2 chr12 57430720 - MYRFL chr12 69909969 + Exonic hg38 LUAD TCGA-67-3774-01A 7 2 5'UTR-CDS Intra-chr q13.3 q15 Transcription factor 93931 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAZ2A-ACVR1B BAZ2A chr12 56636182 - ACVR1B chr12 51975265 + Exonic hg38 LUAD TCGA-67-3774-01A 1 23 In-Frame Intra-chr q13.3 Transcription factor q13.13 Oncogene Seq+ 93932 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE3A-CCT2 PDE3A chr12 20370244 + CCT2 chr12 69592059 + Exonic hg38 LUAD TCGA-67-3774-01A 6 3 Out-of-frame Intra-chr p12.2 q15 Seq+ 93933 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMC1-GLB1 CMC1 chr3 28241812 + GLB1 chr3 33077237 - Exonic hg38 LUAD TCGA-67-3774-01A 2 17 Out-of-frame Intra-chr p24.1 p22.3 Seq+ 93934 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOP2B-GADL1 TOP2B chr3 25604760 - GADL1 chr3 30844466 - Exonic hg38 LUAD TCGA-67-3774-01A 2 4 Out-of-frame Intra-chr p24.2 p23 Seq+ 93935 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH1-TMEM117 NOTCH1 chr9 136513021 - TMEM117 chr12 43944210 + Exonic hg38 LUAD TCGA-67-3774-01A 1000 1000 In-Frame Inter-chr q34.3 Oncogene Tumor suppressor gene q12 93936 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFTPB-SRRM2 SFTPB chr2 85661454 - SRRM2 chr16 2770352 + Exonic hg38 LUAD TCGA-67-4679-01B 1 6 3'UTR-CDS Inter-chr p11.2 p13.3 93937 ChimerSeq TCGA FAWG TCGA_RNA-Seq EML4-ALK EML4 chr2 42264731 + ALK chr2 29223528 - Exonic hg38 LUAD TCGA-67-6215-01A 28 55 In-Frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 93938 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACSF3-MYH7B ACSF3 chr16 89146049 + MYH7B chr20 34990738 + Exonic hg38 LUAD TCGA-67-6215-01A 1 9 Out-of-frame Inter-chr q24.3 q11.22 Seq+ 93939 ChimerSeq TCGA FAWG TCGA_RNA-Seq EML4-ALK EML4 chr2 42264951 + ALK chr2 29223528 - Exonic hg38 LUAD TCGA-67-6216-01A 5 13 Out-of-frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 93940 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTBP1-AP3D1 PTBP1 chr19 807902 + AP3D1 chr19 2101400 - Exonic hg38 LUAD TCGA-67-6217-01A 45 367 CDS-3'UTR Intra-chr p13.3 p13.3 Seq+ 93941 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNKS-FAM86B3P TNKS chr8 9580383 + FAM86B3P chr8 8244099 + Exonic hg38 LUAD TCGA-67-6217-01A 5 18 5'UTR-5'UTR Intra-chr p23.1 p23.1 Seq+ 93942 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEL1L-SERTAD2 SEL1L chr14 81526733 - SERTAD2 chr2 64636875 - Exonic hg38 LUAD TCGA-67-6217-01A 1 13 CDS-5'UTR Inter-chr q31.1 p14 Seq+ 93943 ChimerSeq TCGA FAWG TCGA_RNA-Seq BPTF-BCAS3 BPTF chr17 67940656 + BCAS3 chr17 61368327 + Exonic hg38 LUAD TCGA-67-6217-01A 2 8 Out-of-frame Intra-chr q24.2 Transcription factor q23.2 Seq+ 93944 ChimerSeq TCGA FAWG TCGA_RNA-Seq WBP1L-TRIM8 WBP1L chr10 102744143 + TRIM8 chr10 102654653 + Exonic hg38 LUAD TCGA-67-6217-01A 2 8 In-Frame Intra-chr q24.32 q24.32 Seq+ 93945 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC37-KMT2C CDC37 chr19 10403378 - KMT2C chr7 152139791 - Exonic hg38 LUAD TCGA-67-6217-01A 2 3 In-Frame Inter-chr p13.2 q36.1 Oncogene Tumor suppressor gene 93946 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC6B-MIA2 TRAPPC6B chr14 39170015 - MIA2 chr14 39234015 + Exonic hg38 LUAD TCGA-67-6217-01A 1 5 CDS-5'UTR Intra-chr q21.1 q21.1 Tumor suppressor gene 93947 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP3D1-MUM1 AP3D1 chr19 2108687 - MUM1 chr19 1356324 + Exonic hg38 LUAD TCGA-67-6217-01A 1 3 Out-of-frame Intra-chr p13.3 p13.3 Tumor suppressor gene Seq+ 93948 ChimerSeq TCGA FAWG TCGA_RNA-Seq G2E3-NAP1L1 G2E3 chr14 30581116 + NAP1L1 chr12 76049785 - Exonic hg38 LUAD TCGA-69-7760-01A 4 65 Out-of-frame Inter-chr q12 q21.2 Seq+ 93949 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMK2B-SPIDR CAMK2B chr7 44325357 - SPIDR chr8 47396376 + Exonic hg38 LUAD TCGA-69-7760-01A 3 35 Out-of-frame Inter-chr p13 q11.21 93950 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNTA-SPIDR FNTA chr8 43077364 + SPIDR chr8 47279862 + Exonic hg38 LUAD TCGA-69-7760-01A 5 14 Out-of-frame Intra-chr p11.21 q11.21 93951 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPIDR-FNTA SPIDR chr8 47440542 + FNTA chr8 43083118 + Exonic hg38 LUAD TCGA-69-7760-01A 1 6 In-Frame Intra-chr q11.21 p11.21 93952 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPD-ORMDL3 CPD chr17 30385236 + ORMDL3 chr17 39924220 - Exonic hg38 LUAD TCGA-69-7761-01A 7 47 5'UTR-5'UTR Intra-chr q11.2 Tumor suppressor gene q21.1 Seq+ 93953 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC7-IGKJ4 LRRC7 chr1 70039578 + IGKJ4 chr2 88860921 - Exonic hg38 LUAD TCGA-69-7761-01A 17 0 Out-of-frame Inter-chr p31.1 p11.2 93954 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPNPEP3-RTCB XPNPEP3 chr22 40886515 + RTCB chr22 32388099 - Exonic hg38 LUAD TCGA-69-7761-01A 3 34 In-Frame Intra-chr q13.2 q12.3 93955 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF197-TAF3 ZNF197 chr3 44632599 + TAF3 chr10 7963920 + Exonic hg38 LUAD TCGA-69-7761-01A 1 16 3'UTR-CDS Inter-chr Transcription factor p14 Seq+ 93956 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPD-GSDMB CPD chr17 30385236 + GSDMB chr17 39917321 - Exonic hg38 LUAD TCGA-69-7761-01A 1 5 5'UTR-5'UTR Intra-chr q11.2 Tumor suppressor gene q21.1 93957 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAF1-DCAF6 FAF1 chr1 50535369 - DCAF6 chr1 168065590 + Exonic hg38 LUAD TCGA-69-7763-01A 4 7 In-Frame Intra-chr p32.3 q24.2 Seq+ 93958 ChimerSeq TCGA FAWG TCGA_RNA-Seq POGZ-C1orf21 POGZ chr1 151427823 - C1orf21 chr1 184477386 + Exonic hg38 LUAD TCGA-69-7763-01A 4 3 CDS-5'UTR Intra-chr q21.3 q25.3 Seq+ 93959 ChimerSeq TCGA FAWG TCGA_RNA-Seq NLK-NF1 NLK chr17 28043331 + NF1 chr17 31360487 + Exonic hg38 LUAD TCGA-69-7764-01A 8 22 Out-of-frame Intra-chr q11.2 CMGC:MAPK q11.2 Oncogene Tumor suppressor gene Seq+ 93960 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUPT5H-NADSYN1 SUPT5H chr19 39459960 + NADSYN1 chr11 71463432 + Exonic hg38 LUAD TCGA-69-7764-01A 5 19 Out-of-frame Inter-chr q13.2 q13.4 Seq+ 93961 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED26-HSH2D MED26 chr19 16627872 - HSH2D chr19 16152552 + Exonic hg38 LUAD TCGA-69-7973-01A 15 30 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 93962 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDHA-CTNND2 SDHA chr5 240476 + CTNND2 chr5 11236823 - Exonic hg38 LUAD TCGA-69-7974-01A 3 9 Out-of-frame Intra-chr p15.33 Oncogene Tumor suppressor gene p15.2 Seq+ 93963 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDLIM1-SORBS1 PDLIM1 chr10 95271633 - SORBS1 chr10 95322021 - Exonic hg38 LUAD TCGA-69-7978-01A 11 49 Out-of-frame Intra-chr q23.33 q24.1 Seq+ 93964 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBD1-RPS6KB1 TUBD1 chr17 59892697 - RPS6KB1 chr17 59910562 + Exonic hg38 LUAD TCGA-69-7978-01A 19 6 5'UTR-5'UTR Intra-chr q23.1 q23.1 Oncogene Seq+ 93965 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATOH8-GNLY ATOH8 chr2 85764182 + GNLY chr2 85695320 + Exonic hg38 LUAD TCGA-69-7978-01A 4 8 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 93966 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIRT1-CELF2 SIRT1 chr10 67891554 + CELF2 chr10 11257738 + Exonic hg38 LUAD TCGA-69-7978-01A 2 6 Out-of-frame Intra-chr q21.3 Tumor suppressor gene p14 Seq+ 93967 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT7-GLI3 SEPT7 chr7 35832900 + GLI3 chr7 42076857 - Exonic hg38 LUAD TCGA-69-7978-01A 2 5 Out-of-frame Intra-chr p14.2 p14.1 Transcription factor 93968 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF91-NR1H2 ZNF91 chr19 23358430 - NR1H2 chr19 50352491 + Exonic hg38 LUAD TCGA-69-7978-01A 1 4 Out-of-frame Intra-chr p12 Transcription factor q13.33 Transcription factor 93969 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMCO3-MCF2L TMCO3 chr13 113498505 + MCF2L chr13 112909910 + Exonic hg38 LUAD TCGA-69-7979-01A 50 3071 Out-of-frame Intra-chr q34 q34 93970 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACSL3-PHGDH ACSL3 chr2 222861258 + PHGDH chr1 119721170 + Exonic hg38 LUAD TCGA-69-7979-01A 74 88 5'UTR-CDS Inter-chr q36.1 p12 Seq+ 93971 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK9-SPACA7 DOCK9 chr13 98880547 - SPACA7 chr13 112432444 + Exonic hg38 LUAD TCGA-69-7979-01A 21 165 CDS-3'UTR Intra-chr q32.3 Seq+ 93972 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF638-C2orf74 ZNF638 chr2 71418639 + C2orf74 chr2 61162842 + Exonic hg38 LUAD TCGA-69-7979-01A 20 29 In-Frame Intra-chr p13.3 p15 Seq+ 93973 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCC4-COL4A2 ABCC4 chr13 95170532 - COL4A2 chr13 110424734 + Exonic hg38 LUAD TCGA-69-7979-01A 7 55 In-Frame Intra-chr q32.1 q34 Seq+ 93974 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRTP1-COL4A2 GRTP1 chr13 113344863 - COL4A2 chr13 110501668 + Exonic hg38 LUAD TCGA-69-7979-01A 3 49 In-Frame Intra-chr q34 q34 Seq+ 93975 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMO7-ITGBL1 LMO7 chr13 75838196 + ITGBL1 chr13 101567699 + Exonic hg38 LUAD TCGA-69-7979-01A 2 53 In-Frame Intra-chr q22.2 q33.1 Seq+ 93976 ChimerSeq TCGA FAWG TCGA_RNA-Seq FARP1-UCHL3 FARP1 chr13 98143492 + UCHL3 chr13 75560753 + Exonic hg38 LUAD TCGA-69-7979-01A 9 24 5'UTR-5'UTR Intra-chr q32.2 q22.2 Seq+ 93977 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRD5A1-WASIR2 SRD5A1 chr5 6633869 + WASIR2 chr16 22958 + Exonic hg38 LUAD TCGA-69-7979-01A 11 11 5'UTR-5'UTR Inter-chr p15.31 p13.3 93978 ChimerSeq TCGA FAWG TCGA_RNA-Seq S1PR2-RAVER1 S1PR2 chr19 10231204 - RAVER1 chr19 10319240 - Exonic hg38 LUAD TCGA-69-7979-01A 9 16 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 93979 ChimerSeq TCGA FAWG TCGA_RNA-Seq C11orf49-F2 C11orf49 chr11 46987310 + F2 chr11 46725859 + Exonic hg38 LUAD TCGA-69-7979-01A 7 11 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 93980 ChimerSeq TCGA FAWG TCGA_RNA-Seq YAP1-C11orf70 YAP1 chr11 102114394 + C11orf70 chr11 102047815 + Exonic hg38 LUAD TCGA-69-7979-01A 7 9 Out-of-frame Intra-chr q22.1 Tumor suppressor gene q22.1 Seq+ 93981 ChimerSeq TCGA FAWG TCGA_RNA-Seq GORASP2-ERICH2 GORASP2 chr2 170929403 + ERICH2 chr2 170792863 + Exonic hg38 LUAD TCGA-69-7979-01A 5 12 In-Frame Intra-chr q31.1 q31.1 93982 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIOS-GTF2IRD2B MIOS chr7 7568123 + GTF2IRD2B chr7 75120891 + Exonic hg38 LUAD TCGA-69-7979-01A 5 8 5'UTR-CDS Intra-chr p21.3 q11.23 Transcription factor Seq+ 93983 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAN2A2-BLM MAN2A2 chr15 90903432 + BLM chr15 90760147 + Exonic hg38 LUAD TCGA-69-7979-01A 2 19 5'UTR-CDS Intra-chr q26.1 q26.1 Oncogene Tumor suppressor gene 93984 ChimerSeq TCGA FAWG TCGA_RNA-Seq CARS2-ATP11A CARS2 chr13 110713137 - ATP11A chr13 112854279 + Exonic hg38 LUAD TCGA-69-7979-01A 3 8 5'UTR-CDS Intra-chr q34 q34 93985 ChimerSeq TCGA FAWG TCGA_RNA-Seq CORO7-ENPP7P14 CORO7 chr16 4412356 - ENPP7P14 chr16 5120823 - Exonic hg38 LUAD TCGA-69-7979-01A 2 12 Out-of-frame Intra-chr p13.3 p13.3 93986 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF3L-VPS13B EIF3L chr22 37855644 + VPS13B chr8 99848776 + Exonic hg38 LUAD TCGA-69-7979-01A 3 6 Out-of-frame Inter-chr q13.1 q22.2 Seq+ 93987 ChimerSeq TCGA FAWG TCGA_RNA-Seq FARP1-NALCN FARP1 chr13 98213413 + NALCN chr13 101292366 - Exonic hg38 LUAD TCGA-69-7979-01A 2 9 Out-of-frame Intra-chr q32.2 q33.1 Seq+ 93988 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK1-ARHGEF7 MAPK1 chr22 21867322 - ARHGEF7 chr13 111217679 + Exonic hg38 LUAD TCGA-69-7979-01A 2 8 Out-of-frame Inter-chr q11.22 Oncogene q34 Seq+ 93989 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF21A-PACSIN3 PHF21A chr11 46076754 - PACSIN3 chr11 47183069 - Exonic hg38 LUAD TCGA-69-7979-01A 3 4 CDS-5'UTR Intra-chr p11.2 Transcription factor p11.2 Seq+ 93990 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKL1-NTNG1 MKL1 chr22 40636478 - NTNG1 chr1 107395154 + Exonic hg38 LUAD TCGA-69-7979-01A 2 7 Out-of-frame Inter-chr q13.2 p13.3 Seq+ 93991 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLOCK-PDGFRA CLOCK chr4 55509912 - PDGFRA chr4 54287430 + Exonic hg38 LUAD TCGA-69-7979-01A 2 6 5'UTR-CDS Intra-chr q12 Transcription factor q12 Oncogene Seq+ 93992 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAG2-C16orf45 STAG2 chrX 124086770 + C16orf45 chr16 15515305 + Exonic hg38 LUAD TCGA-69-7979-01A 1 8 Out-of-frame Inter-chr q25 Oncogene Seq+ 93993 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF721-RFPL3S ZNF721 chr4 435770 - RFPL3S chr22 32368567 - Exonic hg38 LUAD TCGA-69-7979-01A 2 4 3'UTR-3'UTR Inter-chr p16.3 Transcription factor q12.3 93994 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANAPC2-EXD3 ANAPC2 chr9 137180181 - EXD3 chr9 137307646 - Exonic hg38 LUAD TCGA-69-7979-01A 1 7 Out-of-frame Intra-chr q34.3 q34.3 93995 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R12B-LRRN2 PPP1R12B chr1 202349142 + LRRN2 chr1 204620218 - Exonic hg38 LUAD TCGA-69-7979-01A 1 4 CDS-5'UTR Intra-chr q32.1 q32.1 93996 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMB7-GOLGA1 PSMB7 chr9 124384598 - GOLGA1 chr9 124881257 - Exonic hg38 LUAD TCGA-69-7979-01A 1 4 In-Frame Intra-chr q33.3 q33.3 93997 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1958-HSDL2 KIAA1958 chr9 112487118 + HSDL2 chr9 112454013 + Exonic hg38 LUAD TCGA-69-7979-01A 1 3 5'UTR-5'UTR Intra-chr q32 q32 93998 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB25-ASH1L RAB25 chr1 156061443 + ASH1L chr1 155482449 - Exonic hg38 LUAD TCGA-69-7979-01A 1 2 Out-of-frame Intra-chr q22 Tumor suppressor gene q22 Transcription factor 93999 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP11A-MCF2L ATP11A chr13 112862571 + MCF2L chr13 112902195 + Exonic hg38 LUAD TCGA-69-7979-01A 1000 1000 Out-of-frame Intra-chr q34 q34 Seq+ 94000 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDH5A1-MAP3K5 ALDH5A1 chr6 24504985 + MAP3K5 chr6 136558876 - Exonic hg38 LUAD TCGA-69-7980-01A 4 12 In-Frame Intra-chr p22.3 q23.3 STE:STE11 Seq+ 94001 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHROOM4-CXorf36 SHROOM4 chrX 50813902 - CXorf36 chrX 45151992 - Exonic hg38 LUAD TCGA-69-7980-01A 5 8 Out-of-frame Intra-chr p11.22 p11.3 Seq+ 94002 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF66-MLLT3 ZNF66 chr19 20793878 + MLLT3 chr9 20448266 - Exonic hg38 LUAD TCGA-69-7980-01A 2 15 3'UTR-CDS Inter-chr Transcription factor p21.3 94003 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF216-JAZF1 RNF216 chr7 5641154 - JAZF1 chr7 27991981 - Exonic hg38 LUAD TCGA-69-7980-01A 4 6 Out-of-frame Intra-chr p22.1 p15.1 Transcription factor Seq+ 94004 ChimerSeq TCGA FAWG TCGA_RNA-Seq TARBP1-BTBD7 TARBP1 chr1 234393362 - BTBD7 chr14 93296157 - Exonic hg38 LUAD TCGA-69-7980-01A 2 8 CDS-5'UTR Inter-chr q42.2 Seq+ 94005 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFTPB-MUC1 SFTPB chr2 85665289 - MUC1 chr1 155188231 - Exonic hg38 LUAD TCGA-69-8253-01A 1 21 In-Frame Inter-chr p11.2 q22 Oncogene 94006 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF139-EIF2A RNF139 chr8 124475290 + EIF2A chr3 150552356 + Exonic hg38 LUAD TCGA-69-8254-01A 4 36 In-Frame Inter-chr q24.13 q25.1 Seq+ 94007 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCARB2-AREG SCARB2 chr4 76213427 - AREG chr4 74446534 + Exonic hg38 LUAD TCGA-69-8255-01A 10 26 Out-of-frame Intra-chr q21.1 q13.3 Seq+ 94008 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC9-C2CD5 TRAPPC9 chr8 140397620 - C2CD5 chr12 22527892 - Exonic hg38 LUAD TCGA-69-8255-01A 6 15 In-Frame Inter-chr q24.3 p12.1 Seq+ 94009 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREBBP-TP53TG3 CREBBP chr16 3850297 - TP53TG3 chr16 32674564 - Exonic hg38 LUAD TCGA-69-8255-01A 5 11 CDS-3'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p11.2 94010 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL26A1-BET1 COL26A1 chr7 101363190 + BET1 chr7 93994385 - Exonic hg38 LUAD TCGA-69-8255-01A 3 14 Out-of-frame Intra-chr q22.1 q21.3 Seq+ 94011 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP54-CXCL9 NUP54 chr4 76124649 - CXCL9 chr4 76006274 - Exonic hg38 LUAD TCGA-69-8255-01A 2 14 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 94012 ChimerSeq TCGA FAWG TCGA_RNA-Seq IKBKB-GOT1L1 IKBKB chr8 42293512 + GOT1L1 chr8 37938881 - Exonic hg38 LUAD TCGA-69-8255-01A 3 8 In-Frame Intra-chr p11.21 Oncogene p11.23 Seq+ 94013 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT6A-RAB11FIP1 KAT6A chr8 42048378 - RAB11FIP1 chr8 37877551 - Exonic hg38 LUAD TCGA-69-8255-01A 1 13 Out-of-frame Intra-chr p11.21 Oncogene p11.23 Seq+ 94014 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC10-GRIK1 TRAPPC10 chr21 44012560 + GRIK1 chr21 29694063 - Exonic hg38 LUAD TCGA-69-8453-01A 5 9 In-Frame Intra-chr q22.3 q21.3 Seq+ 94015 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPOP-GPATCH1 SPOP chr17 49677933 - GPATCH1 chr19 33119010 + Exonic hg38 LUAD TCGA-69-A59K-01A 12 65 5'UTR-5'UTR Inter-chr q21.33 Oncogene Tumor suppressor gene q13.11 Seq+ 94016 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC6A-ANKS4B TNRC6A chr16 24791034 + ANKS4B chr16 21251608 + Exonic hg38 LUAD TCGA-69-A59K-01A 3 39 Out-of-frame Intra-chr p12.1 Seq+ 94017 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFKBID-ZNF585B NFKBID chr19 35898472 - ZNF585B chr19 37207254 - Exonic hg38 LUAD TCGA-69-A59K-01A 5 29 5'UTR-5'UTR Intra-chr q13.12 q13.12 Transcription factor Seq+ 94018 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEPD-SKAP1 PEPD chr19 33462995 - SKAP1 chr17 48137337 - Exonic hg38 LUAD TCGA-69-A59K-01A 3 32 Out-of-frame Inter-chr q13.11 q21.32 Seq+ 94019 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF720-POLN ZNF720 chr16 31753900 + POLN chr4 2131290 - Exonic hg38 LUAD TCGA-69-A59K-01A 2 14 Out-of-frame Inter-chr p11.2 p16.3 Seq+ 94020 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF675-BRCA1 ZNF675 chr19 23687031 - BRCA1 chr17 43115779 - Exonic hg38 LUAD TCGA-69-A59K-01A 1 12 Out-of-frame Inter-chr p12 Transcription factor q21.31 Oncogene Tumor suppressor gene Seq+ 94021 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP6-SPTSSA AKAP6 chr14 32433817 + SPTSSA chr14 34435304 - Exonic hg38 LUAD TCGA-69-A59K-01A 2 4 Out-of-frame Intra-chr q12 q13.1 Seq+ 94022 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM102A-PTGES2 FAM102A chr9 127953575 - PTGES2 chr9 128125441 - Exonic hg38 LUAD TCGA-69-A59K-01A 1 7 In-Frame Intra-chr q34.11 q34.11 Seq+ 94023 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF585A-CACNA1G ZNF585A chr19 37169839 - CACNA1G chr17 50575543 + Exonic hg38 LUAD TCGA-69-A59K-01A 1 7 In-Frame Inter-chr q13.12 Transcription factor q21.33 94024 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM6A-DCAF7 KDM6A chrX 44873987 + DCAF7 chr17 63578470 + Exonic hg38 LUAD TCGA-71-6725-01A 5 22 In-Frame Inter-chr p11.3 Oncogene Tumor suppressor gene q23.3 Seq+ 94025 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM6A-ZNF674 KDM6A chrX 44873987 + ZNF674 chrX 46501335 - Exonic hg38 LUAD TCGA-71-6725-01A 5 21 Out-of-frame Intra-chr p11.3 Oncogene Tumor suppressor gene p11.3 Transcription factor Seq+ 94026 ChimerSeq TCGA FAWG TCGA_RNA-Seq THRAP3-ERI3 THRAP3 chr1 36224505 + ERI3 chr1 44313228 - Exonic hg38 LUAD TCGA-71-8520-01A 7 24 5'UTR-CDS Intra-chr p34.3 p34.1 Seq+ 94027 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM39B-C1orf94 TMEM39B chr1 32077318 + C1orf94 chr1 34197225 + Exonic hg38 LUAD TCGA-71-8520-01A 6 24 In-Frame Intra-chr p35.2 p35.1 Seq+ 94028 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNIP1-PUM1 SNIP1 chr1 37552645 - PUM1 chr1 31028864 - Exonic hg38 LUAD TCGA-71-8520-01A 3 17 In-Frame Intra-chr p34.3 p35.2 Seq+ 94029 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB8OS-ERI3 ZBTB8OS chr1 32627508 - ERI3 chr1 44284907 - Exonic hg38 LUAD TCGA-71-8520-01A 2 14 Out-of-frame Intra-chr p35.1 p34.1 Seq+ 94030 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNALI1-ARHGEF6 DNALI1 chr1 37559496 + ARHGEF6 chrX 136708770 - Exonic hg38 LUAD TCGA-71-8520-01A 1 4 Out-of-frame Inter-chr p34.3 q26.3 Seq+ 94031 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERI3-HTATSF1 ERI3 chr1 44308310 - HTATSF1 chrX 136497624 + Exonic hg38 LUAD TCGA-71-8520-01A 1 4 CDS-5'UTR Inter-chr p34.1 q26.3 94032 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIK3-CD3D SIK3 chr11 117098143 - CD3D chr11 118339494 - Exonic hg38 LUAD TCGA-73-4658-01A 3 5 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 94033 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMO7-MED4 LMO7 chr13 75823873 + MED4 chr13 48090418 - Exonic hg38 LUAD TCGA-73-4658-01A 1 4 Out-of-frame Intra-chr q22.2 q14.2 Seq+ 94034 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPO7-ETV4 XPO7 chr8 21980203 + ETV4 chr17 43536479 - Exonic hg38 LUAD TCGA-73-4659-01A 2 7 Out-of-frame Inter-chr p21.3 q21.31 Oncogene Transcription factor Seq+ 94035 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP6V1H-TCEA1 ATP6V1H chr8 53829444 - TCEA1 chr8 54010492 - Exonic hg38 LUAD TCGA-73-4659-01A 1 2 In-Frame Intra-chr q11.23 q11.23 Seq+ 94036 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOP1-ADGRL3 TOP1 chr20 41097341 + ADGRL3 chr4 61892656 + Exonic hg38 LUAD TCGA-73-4662-01A 5 16 Out-of-frame Inter-chr q12 Oncogene q13.1 Oncogene 94037 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHROOM2-BHLHE41 SHROOM2 chrX 9786710 + BHLHE41 chr12 26124582 - Exonic hg38 LUAD TCGA-73-4662-01A 4 14 Out-of-frame Inter-chr p22.2 p12.1 Tumor suppressor gene Transcription factor Seq+ 94038 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF664-NAP1L1 ZNF664 chr12 123988138 + NAP1L1 chr12 76060279 - Exonic hg38 LUAD TCGA-73-4668-01A 7 30 5'UTR-CDS Intra-chr q24.31 Transcription factor q21.2 94039 ChimerSeq TCGA FAWG TCGA_RNA-Seq NMD3-LRRC77P NMD3 chr3 161222057 + LRRC77P chr3 167888860 + Exonic hg38 LUAD TCGA-73-4668-01A 2 10 CDS-5'UTR Intra-chr q26.1 q26.1 94040 ChimerSeq TCGA FAWG TCGA_RNA-Seq P2RX4-ZNF664 P2RX4 chr12 121210298 + ZNF664 chr12 124011381 + Exonic hg38 LUAD TCGA-73-4668-01A 1 9 5'UTR-5'UTR Intra-chr q24.31 q24.31 Transcription factor 94041 ChimerSeq TCGA FAWG TCGA_RNA-Seq JMJD1C-TMEM178B JMJD1C chr10 63521738 - TMEM178B chr7 141212591 + Exonic hg38 LUAD TCGA-73-4668-01A 1 5 5'UTR-CDS Inter-chr q21.3 q34 94042 ChimerSeq TCGA FAWG TCGA_RNA-Seq EDC3-FAM86C2P EDC3 chr15 74671455 - FAM86C2P chr11 67799475 - Exonic hg38 LUAD TCGA-73-4670-01A 2 11 CDS-3'UTR Inter-chr q24.1 q13.2 94043 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP3R1-SPATS2L PPP3R1 chr2 68217092 - SPATS2L chr2 200440649 + Exonic hg38 LUAD TCGA-73-4676-01A 6 23 In-Frame Intra-chr p14 q33.1 Seq+ 94044 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATM-SLC30A4 GATM chr15 45401899 - SLC30A4 chr15 45490881 - Exonic hg38 LUAD TCGA-73-4676-01A 1 6 5'UTR-CDS Intra-chr q21.1 q21.1 94045 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD2AP-OPN5 CD2AP chr6 47544706 + OPN5 chr6 47811674 + Exonic hg38 LUAD TCGA-73-4677-01A 5 16 Out-of-frame Intra-chr p12.3 p12.3 Seq+ 94046 ChimerSeq TCGA FAWG TCGA_RNA-Seq C11orf80-RBM14 C11orf80 chr11 66828364 + RBM14 chr11 66624214 + Exonic hg38 LUAD TCGA-73-7499-01A 4 7 Out-of-frame Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 94047 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF763-CXorf58 ZNF763 chr19 11965211 + CXorf58 chrX 23910283 + Exonic hg38 LUAD TCGA-73-A9RS-01A 2 2 5'UTR-5'UTR Inter-chr p13.2 Transcription factor p22.11 Seq+ 94048 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRD5A1-ADAMTS16 SRD5A1 chr5 6633869 + ADAMTS16 chr5 5303572 + Exonic hg38 LUAD TCGA-75-5122-01A 2 7 Out-of-frame Intra-chr p15.31 p15.32 Seq+ 94049 ChimerSeq TCGA FAWG TCGA_RNA-Seq KRAS-SLC2A14 KRAS chr12 25245274 - SLC2A14 chr12 7832814 - Exonic hg38 LUAD TCGA-75-5122-01A 1 6 In-Frame Intra-chr p12.1 Oncogene p13.31 94050 ChimerSeq TCGA FAWG TCGA_RNA-Seq N4BP2L2-SUCLA2 N4BP2L2 chr13 32436361 - SUCLA2 chr13 47943445 - Exonic hg38 LUAD TCGA-75-5122-01A 2 2 3'UTR-CDS Intra-chr q13.1 q14.2 Seq+ 94051 ChimerSeq TCGA FAWG TCGA_RNA-Seq YEATS4-STK38L YEATS4 chr12 69362907 + STK38L chr12 27297710 + Exonic hg38 LUAD TCGA-75-5122-01A 1 4 CDS-5'UTR Intra-chr q15 p11.23 94052 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNS-CYP27B1 GNS chr12 64720022 - CYP27B1 chr12 57763255 - Exonic hg38 LUAD TCGA-75-5122-01A 1 2 Out-of-frame Intra-chr q14.3 q14.1 94053 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPM-SLC25A23 HNRNPM chr19 8445111 + SLC25A23 chr19 6438534 - Exonic hg38 LUAD TCGA-75-5125-01A 16 183 CDS-3'UTR Intra-chr p13.2 p13.3 Seq+ 94054 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCLN-ACSBG2 NCLN chr19 3193428 + ACSBG2 chr19 6187283 + Exonic hg38 LUAD TCGA-75-5125-01A 10 19 In-Frame Intra-chr p13.3 p13.3 Seq+ 94055 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF207-RHOT1 ZNF207 chr17 32362984 + RHOT1 chr17 32253085 + Exonic hg38 LUAD TCGA-75-5126-01A 1 3 CDS-3'UTR Intra-chr q11.2 Transcription factor q11.2 Seq+ 94056 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA3-SGK2 NCOA3 chr20 47583261 + SGK2 chr20 43566473 + Exonic hg38 LUAD TCGA-75-5146-01A 15 70 5'UTR-5'UTR Intra-chr q13.12 Transcription factor q13.12 AGC:SGK Seq+ 94057 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAI14-ASB4 RAI14 chr5 34686955 + ASB4 chr7 95527813 + Exonic hg38 LUAD TCGA-75-5147-01A 33 106 Out-of-frame Inter-chr p13.2 q21.3 Seq+ 94058 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERGEF-ANKRD29 SERGEF chr11 17959470 - ANKRD29 chr18 23649193 - Exonic hg38 LUAD TCGA-75-5147-01A 16 98 In-Frame Inter-chr p15.1 q11.2 Seq+ 94059 ChimerSeq TCGA FAWG TCGA_RNA-Seq ECE1-NIPAL3 ECE1 chr1 21345376 - NIPAL3 chr1 24440172 + Exonic hg38 LUAD TCGA-75-5147-01A 5 14 In-Frame Intra-chr p36.12 p36.11 Seq+ 94060 ChimerSeq TCGA FAWG TCGA_RNA-Seq SWAP70-ZNF143 SWAP70 chr11 9664278 + ZNF143 chr11 9501091 + Exonic hg38 LUAD TCGA-75-5147-01A 1 17 Out-of-frame Intra-chr p15.4 p15.4 Transcription factor Seq+ 94061 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 59906122 - RET chr10 43116584 + Exonic hg38 LUAD TCGA-75-6203-01A 6 17 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 94062 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRN4-MCM8 LRRN4 chr20 6050779 - MCM8 chr20 5993506 + Exonic hg38 LUAD TCGA-75-6205-01A 3 8 In-Frame Intra-chr p12.3 p12.3 Seq+ 94063 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLN1-SFTPB TLN1 chr9 35703560 - SFTPB chr2 85659682 - Exonic hg38 LUAD TCGA-75-6206-01A 1 3 CDS-3'UTR Inter-chr p13.3 p11.2 94064 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIC1-AARD RIC1 chr9 5690038 + AARD chr8 116942558 + Exonic hg38 LUAD TCGA-75-6207-01A 56 98 Out-of-frame Inter-chr p24.1 q24.11 94065 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIO-UHRF2 TRIO chr5 14143882 + UHRF2 chr9 6420912 + Exonic hg38 LUAD TCGA-75-6207-01A 11 16 Out-of-frame Inter-chr p15.2 p24.1 Tumor suppressor gene Seq+ 94066 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC12A7-TMEM232 SLC12A7 chr5 1057471 - TMEM232 chr5 110332925 - Exonic hg38 LUAD TCGA-75-6207-01A 5 8 5'UTR-3'UTR Intra-chr p15.33 q22.1 94067 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCTD18-SNED1 KCTD18 chr2 200497753 - SNED1 chr2 241067764 + Exonic hg38 LUAD TCGA-75-6207-01A 3 7 In-Frame Intra-chr q33.1 q37.3 Seq+ 94068 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR548XHG-EXOC5 MIR548XHG chr21 18737924 - EXOC5 chr14 57247712 - Exonic hg38 LUAD TCGA-75-6207-01A 3 4 3'UTR-CDS Inter-chr q21.1 q22.3 94069 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2R2-TMEM8B UBE2R2 chr9 33817934 + TMEM8B chr9 35841134 + Exonic hg38 LUAD TCGA-75-6207-01A 1 5 In-Frame Intra-chr p13.3 p13.3 94070 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL2-DLGAP4 OSBPL2 chr20 62238597 + DLGAP4 chr20 36524250 + Exonic hg38 LUAD TCGA-75-6211-01A 21 19 5'UTR-CDS Intra-chr q13.33 q11.23 Seq+ 94071 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX27-TARS2 SNX27 chr1 151683445 + TARS2 chr1 150504335 + Exonic hg38 LUAD TCGA-75-6211-01A 8 14 In-Frame Intra-chr q21.3 q21.2 Seq+ 94072 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM118B-ST3GAL4 FAM118B chr11 126241044 + ST3GAL4 chr11 126406096 + Exonic hg38 LUAD TCGA-75-6211-01A 4 11 In-Frame Intra-chr q24.2 q24.2 Seq+ 94073 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSRNP2-GLS2 CSRNP2 chr12 51083339 - GLS2 chr12 56480387 - Exonic hg38 LUAD TCGA-75-6211-01A 4 7 5'UTR-5'UTR Intra-chr q13.12 Transcription factor q13.3 Tumor suppressor gene Seq+ 94074 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIB-ZDHHC21 NFIB chr9 14306989 - ZDHHC21 chr9 14662326 - Exonic hg38 LUAD TCGA-75-6211-01A 3 10 In-Frame Intra-chr p22.3 Transcription factor p22.3 Seq+ 94075 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFXN5-TMEM150A SFXN5 chr2 73070460 - TMEM150A chr2 85602064 - Exonic hg38 LUAD TCGA-75-6211-01A 1 6 5'UTR-5'UTR Intra-chr p13.2 p11.2 94076 ChimerSeq TCGA FAWG TCGA_RNA-Seq OLA1-PDE11A OLA1 chr2 174223033 - PDE11A chr2 177728172 - Exonic hg38 LUAD TCGA-75-6211-01A 1 2 Out-of-frame Intra-chr q31.1 q31.2 94077 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD6-P2RY8 CHD6 chr20 41618340 - P2RY8 chrY 1466582 - Exonic hg38 LUAD TCGA-75-6211-01A 1 1 5'UTR-5'UTR Inter-chr q12 p22.33 94078 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA3-ZNF521 LAMA3 chr18 23949924 + ZNF521 chr18 25227697 - Exonic hg38 LUAD TCGA-75-6214-01A 82 270 In-Frame Intra-chr q11.2 q11.2 Oncogene Transcription factor Seq+ 94079 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALT5-TOX2 B4GALT5 chr20 49713576 - TOX2 chr20 43973367 + Exonic hg38 LUAD TCGA-75-6214-01A 16 14 Out-of-frame Intra-chr q13.13 q13.12 Seq+ 94080 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMPD3-MEIOB SMPD3 chr16 68448353 - MEIOB chr16 1862116 - Exonic hg38 LUAD TCGA-75-6214-01A 1 5 5'UTR-CDS Intra-chr q22.1 94081 ChimerSeq TCGA FAWG TCGA_RNA-Seq L3MBTL4-LAMA1 L3MBTL4 chr18 6414801 - LAMA1 chr18 6962059 - Exonic hg38 LUAD TCGA-75-6214-01A 1 3 5'UTR-CDS Intra-chr p11.31 Tumor suppressor gene Transcription factor p11.31 Seq+ 94082 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP4B1-PLA2G1B CYP4B1 chr1 46817181 + PLA2G1B chr12 120326020 - Exonic hg38 LUAD TCGA-75-7025-01A 1 29 In-Frame Inter-chr p33 q24.31 94083 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAP3-GALNS LAP3 chr4 17588977 + GALNS chr16 88826838 - Exonic hg38 LUAD TCGA-75-7027-01A 1 4 Out-of-frame Inter-chr p15.32 q24.3 94084 ChimerSeq TCGA FAWG TCGA_RNA-Seq TYMP-PPP6R2 TYMP chr22 50529904 - PPP6R2 chr22 50372020 + Exonic hg38 LUAD TCGA-75-7031-01A 5 33 5'UTR-5'UTR Intra-chr q13.33 q13.33 Seq+ 94085 ChimerSeq TCGA FAWG TCGA_RNA-Seq ODF3B-PPP6R2 ODF3B chr22 50529904 - PPP6R2 chr22 50372020 + Exonic hg38 LUAD TCGA-75-7031-01A 5 28 3'UTR-5'UTR Intra-chr q13.33 q13.33 94086 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRTG-PYGO1 PRTG chr15 55740382 - PYGO1 chr15 55548995 - Exonic hg38 LUAD TCGA-75-7031-01A 3 20 In-Frame Intra-chr q21.3 q21.3 Seq+ 94087 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEX9-CYFIP1 TEX9 chr15 56373504 + CYFIP1 chr15 22883011 - Exonic hg38 LUAD TCGA-75-7031-01A 2 12 5'UTR-5'UTR Intra-chr q21.3 q11.2 Seq+ 94088 ChimerSeq TCGA FAWG TCGA_RNA-Seq LY75-CCDC148 LY75 chr2 159886420 - CCDC148 chr2 158250912 - Exonic hg38 LUAD TCGA-75-7031-01A 1 15 Out-of-frame Intra-chr q24.2 q24.1 94089 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF12-NIPA1 TCF12 chr15 56921098 + NIPA1 chr15 22810749 + Exonic hg38 LUAD TCGA-75-7031-01A 4 1 In-Frame Intra-chr q21.3 Oncogene Transcription factor q11.2 Seq+ 94090 ChimerSeq TCGA FAWG TCGA_RNA-Seq ILVBL-SLC1A6 ILVBL chr19 15122693 - SLC1A6 chr19 14950390 - Exonic hg38 LUAD TCGA-78-7143-01A 27 67 In-Frame Intra-chr p13.12 p13.12 Seq+ 94091 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF606-GDAP1 ZNF606 chr19 57988207 - GDAP1 chr8 74488678 + Exonic hg38 LUAD TCGA-78-7143-01A 5 16 In-Frame Inter-chr q13.43 Transcription factor q21.11 94092 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-ACSS2 FRS2 chr12 69470530 + ACSS2 chr20 34923323 + Exonic hg38 LUAD TCGA-78-7143-01A 1 16 5'UTR-CDS Inter-chr q15 q11.22 Seq+ 94093 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT2-TSPAN8 CNOT2 chr12 70294294 + TSPAN8 chr12 71138230 - Exonic hg38 LUAD TCGA-78-7143-01A 1 6 5'UTR-CDS Intra-chr q15 q21.1 Seq+ 94094 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM53B-BBIP1 FAM53B chr10 124696158 - BBIP1 chr10 110901612 - Exonic hg38 LUAD TCGA-78-7145-01A 3 18 In-Frame Intra-chr q26.13 q25.2 Seq+ 94095 ChimerSeq TCGA FAWG TCGA_RNA-Seq YWHAZ-HHLA1 YWHAZ chr8 100948596 - HHLA1 chr8 132079966 - Exonic hg38 LUAD TCGA-78-7145-01A 2 9 Out-of-frame Intra-chr q22.3 q24.22 Seq+ 94096 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM67-STMN2 TMEM67 chr8 93803684 + STMN2 chr8 79664815 + Exonic hg38 LUAD TCGA-78-7145-01A 1 10 In-Frame Intra-chr q22.1 q21.13 Seq+ 94097 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF24-CDS2 RNF24 chr20 3945177 - CDS2 chr20 5173523 + Exonic hg38 LUAD TCGA-78-7145-01A 1 8 In-Frame Intra-chr p13 p12.3 Seq+ 94098 ChimerSeq TCGA FAWG TCGA_RNA-Seq F11R-NOS1AP F11R chr1 161021010 - NOS1AP chr1 162355187 + Exonic hg38 LUAD TCGA-78-7146-01A 29 220 In-Frame Intra-chr q23.3 q23.3 Seq+ 94099 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13-DDX42 MED13 chr17 62052537 - DDX42 chr17 63808820 + Exonic hg38 LUAD TCGA-78-7146-01A 36 150 Out-of-frame Intra-chr q23.2 q23.3 Seq+ 94100 ChimerSeq TCGA FAWG TCGA_RNA-Seq NARF-USP36 NARF chr17 82481211 + USP36 chr17 78787658 - Exonic hg38 LUAD TCGA-78-7146-01A 38 116 CDS-3'UTR Intra-chr q25.3 q25.3 94101 ChimerSeq TCGA FAWG TCGA_RNA-Seq HELZ-CACNG4 HELZ chr17 67120405 - CACNG4 chr17 67030466 + Exonic hg38 LUAD TCGA-78-7146-01A 16 90 In-Frame Intra-chr q24.2 q24.2 Seq+ 94102 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBF1-HELZ FBF1 chr17 75937566 - HELZ chr17 67138114 - Exonic hg38 LUAD TCGA-78-7146-01A 5 40 Out-of-frame Intra-chr q25.1 q24.2 Seq+ 94103 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAR-GPATCH4 ADAR chr1 154601041 - GPATCH4 chr1 156599104 - Exonic hg38 LUAD TCGA-78-7146-01A 1 23 5'UTR-5'UTR Intra-chr q21.3 q23.1 Seq+ 94104 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF6-GJA5 ATF6 chr1 161781999 + GJA5 chr1 147759271 - Exonic hg38 LUAD TCGA-78-7146-01A 2 15 CDS-5'UTR Intra-chr q23.3 Transcription factor q21.2 Seq+ 94105 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCN4A-TRIM47 SCN4A chr17 63957162 - TRIM47 chr17 75876492 - Exonic hg38 LUAD TCGA-78-7146-01A 2 14 In-Frame Intra-chr q23.3 q25.1 Seq+ 94106 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARMC7-CYB561 ARMC7 chr17 75110606 + CYB561 chr17 63437560 - Exonic hg38 LUAD TCGA-78-7146-01A 1 13 Out-of-frame Intra-chr q25.1 q23.3 94107 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM41-ASB9 TRIM41 chr5 181224812 + ASB9 chrX 15258945 - Exonic hg38 LUAD TCGA-78-7146-01A 3 4 Out-of-frame Inter-chr q35.3 p22.2 Seq+ 94108 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOS1AP-F5 NOS1AP chr1 162343976 + F5 chr1 169515626 - Exonic hg38 LUAD TCGA-78-7146-01A 2 4 Out-of-frame Intra-chr q23.3 q24.2 Seq+ 94109 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP9X-GLOD5 USP9X chrX 41086109 + GLOD5 chrX 48765835 + Exonic hg38 LUAD TCGA-78-7146-01A 1 7 5'UTR-CDS Intra-chr p11.4 Oncogene p11.23 94110 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC38A1-RHEBL1 SLC38A1 chr12 46229153 - RHEBL1 chr12 49069106 - Exonic hg38 LUAD TCGA-78-7146-01A 1 4 Out-of-frame Intra-chr q13.11 q13.12 94111 ChimerSeq TCGA FAWG TCGA_RNA-Seq MFSD11-HELZ MFSD11 chr17 76775171 + HELZ chr17 67087081 - Exonic hg38 LUAD TCGA-78-7146-01A 1 2 Out-of-frame Intra-chr q25.1 q24.2 94112 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNDC3B-KHDRBS3 FNDC3B chr3 172039771 + KHDRBS3 chr8 135606955 + Exonic hg38 LUAD TCGA-78-7147-01A 72 604 5'UTR-CDS Inter-chr q26.31 q24.23 Seq+ 94113 ChimerSeq TCGA FAWG TCGA_RNA-Seq KPNA1-GMPS KPNA1 chr3 122496437 - GMPS chr3 155919233 + Exonic hg38 LUAD TCGA-78-7147-01A 14 189 In-Frame Intra-chr q21.1 q25.31 Seq+ 94114 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP5-TCTEX1D2 SENP5 chr3 196868073 + TCTEX1D2 chr3 196307012 - Exonic hg38 LUAD TCGA-78-7147-01A 23 50 5'UTR-CDS Intra-chr q29 q29 Seq+ 94115 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSC22D2-SELENOT TSC22D2 chr3 150411308 + SELENOT chr3 150622385 + Exonic hg38 LUAD TCGA-78-7147-01A 9 51 In-Frame Intra-chr q25.1 q25.1 94116 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM83A-LYN FAM83A chr8 123194148 + LYN chr8 55998346 + Exonic hg38 LUAD TCGA-78-7147-01A 4 5 Out-of-frame Intra-chr q24.13 q12.1 TK:Src Seq+ 94117 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSRC1-MFSD1 RSRC1 chr3 158203245 + MFSD1 chr3 158823428 + Exonic hg38 LUAD TCGA-78-7147-01A 2 12 Out-of-frame Intra-chr q25.32 q25.32 Seq+ 94118 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL11-CHCHD6 OSBPL11 chr3 125547406 - CHCHD6 chr3 126852647 + Exonic hg38 LUAD TCGA-78-7147-01A 1 10 Out-of-frame Intra-chr q21.2 q21.3 Seq+ 94119 ChimerSeq TCGA FAWG TCGA_RNA-Seq RB1-XKR5 RB1 chr13 48307406 + XKR5 chr8 6815918 - Exonic hg38 LUAD TCGA-78-7147-01A 1 8 CDS-5'UTR Inter-chr q14.2 Oncogene Tumor suppressor gene p23.1 94120 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX40-UNC5D DHX40 chr17 59566794 + UNC5D chr8 35549292 + Exonic hg38 LUAD TCGA-78-7147-01A 1 3 In-Frame Inter-chr q23.1 p12 Tumor suppressor gene Seq+ 94121 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPIB-SFTPB PPIB chr15 64160104 - SFTPB chr2 85658855 - Exonic hg38 LUAD TCGA-78-7148-01A 1 23 Out-of-frame Inter-chr q22.31 p11.2 94122 ChimerSeq TCGA FAWG TCGA_RNA-Seq C11orf24-TRIM53AP C11orf24 chr11 68271857 - TRIM53AP chr11 89999741 - Exonic hg38 LUAD TCGA-78-7148-01A 1 9 5'UTR-3'UTR Intra-chr q13.2 q14.3 94123 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFTPB-DMTN SFTPB chr2 85665606 - DMTN chr8 22067527 + Exonic hg38 LUAD TCGA-78-7148-01A 1 5 In-Frame Inter-chr p11.2 p21.3 94124 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3A-RAD23A RAB3A chr19 18200327 - RAD23A chr19 12947848 + Exonic hg38 LUAD TCGA-78-7148-01A 1 3 Out-of-frame Intra-chr p13.11 p13.13 94125 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK10-SPATA33 CDK10 chr16 89692516 + SPATA33 chr16 89669286 + Exonic hg38 LUAD TCGA-78-7150-01A 28 82 Out-of-frame Intra-chr q24.3 CMGC:CDK q24.3 94126 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBAP2-APTX UBAP2 chr9 34017050 - APTX chr9 32988124 - Exonic hg38 LUAD TCGA-78-7150-01A 5 75 5'UTR-5'UTR Intra-chr p13.3 p21.1 Seq+ 94127 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN4-EPS8L2 TSPAN4 chr11 850367 + EPS8L2 chr11 720062 + Exonic hg38 LUAD TCGA-78-7150-01A 12 32 In-Frame Intra-chr p15.5 p15.5 Seq+ 94128 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOCS7-RSF1 SOCS7 chr17 38377842 + RSF1 chr11 77764689 - Exonic hg38 LUAD TCGA-78-7150-01A 6 33 3'UTR-CDS Inter-chr q12 q14.1 Seq+ 94129 ChimerSeq TCGA FAWG TCGA_RNA-Seq OGFOD1-CRNDE OGFOD1 chr16 56476170 + CRNDE chr16 54923650 - Exonic hg38 LUAD TCGA-78-7150-01A 5 15 In-Frame Intra-chr q13 q12.2 Seq+ 94130 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF1-GRIP1 ATF1 chr12 50780238 + GRIP1 chr12 66596927 - Exonic hg38 LUAD TCGA-78-7150-01A 2 12 Out-of-frame Intra-chr q13.12 Oncogene Transcription factor q14.3 Seq+ 94131 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF21A-TMTC2 KIF21A chr12 39442927 - TMTC2 chr12 83030798 + Exonic hg38 LUAD TCGA-78-7150-01A 2 10 Out-of-frame Intra-chr q12 q21.31 Seq+ 94132 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEF2K-KCTD1 EEF2K chr16 22257385 + KCTD1 chr18 26501250 - Exonic hg38 LUAD TCGA-78-7150-01A 1 2 5'UTR-5'UTR Inter-chr p12.2 q11.2 Seq+ 94133 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADNP-DDX27 ADNP chr20 50930826 - DDX27 chr20 49221452 + Exonic hg38 LUAD TCGA-78-7152-01A 25 11 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.13 Seq+ 94134 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRC-SNHG17 SRC chr20 37344887 + SNHG17 chr20 38421098 - Exonic hg38 LUAD TCGA-78-7152-01A 7 59 5'UTR-3'UTR Intra-chr q11.23 TK:Src Oncogene q11.23 94135 ChimerSeq TCGA FAWG TCGA_RNA-Seq GABPB2-PRUNE1 GABPB2 chr1 151070934 + PRUNE1 chr1 151024611 + Exonic hg38 LUAD TCGA-78-7152-01A 2 2 5'UTR-5'UTR Intra-chr q21.3 q21.3 94136 ChimerSeq TCGA FAWG TCGA_RNA-Seq UMAD1-C1GALT1 UMAD1 chr7 7801743 + C1GALT1 chr7 7238255 + Exonic hg38 LUAD TCGA-78-7152-01A 1 4 Out-of-frame Intra-chr p21.3 p22.1 94137 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDHB-PLN SDHB chr1 17053948 - PLN chr6 118558825 + Exonic hg38 LUAD TCGA-78-7153-01A 11 18 CDS-5'UTR Inter-chr p36.13 Oncogene Tumor suppressor gene q22.31 Seq+ 94138 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC9-PSKH2 TRAPPC9 chr8 140221459 - PSKH2 chr8 86074171 - Exonic hg38 LUAD TCGA-78-7153-01A 2 48 CDS-5'UTR Intra-chr q24.3 q21.3 CAMK:PSK Seq+ 94139 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF1B-AGTRAP KIF1B chr1 10297246 + AGTRAP chr1 11745803 + Exonic hg38 LUAD TCGA-78-7153-01A 5 23 In-Frame Intra-chr p36.22 Tumor suppressor gene p36.22 Seq+ 94140 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM49B-PREX2 FAM49B chr8 130016370 - PREX2 chr8 68191722 + Exonic hg38 LUAD TCGA-78-7153-01A 4 12 5'UTR-CDS Intra-chr q24.21 q13.2 Seq+ 94141 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARMC1-UBE2W ARMC1 chr8 65613244 - UBE2W chr8 73830472 - Exonic hg38 LUAD TCGA-78-7153-01A 1 9 In-Frame Intra-chr q13.1 q21.11 Seq+ 94142 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF4G3-NSUN4 EIF4G3 chr1 21089138 - NSUN4 chr1 46352868 + Exonic hg38 LUAD TCGA-78-7153-01A 2 5 5'UTR-5'UTR Intra-chr p36.12 p33 Seq+ 94143 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC174-ECHDC1 CCDC174 chr3 14666947 + ECHDC1 chr6 127290277 - Exonic hg38 LUAD TCGA-78-7153-01A 2 3 Out-of-frame Inter-chr p25.1 q22.33 Seq+ 94144 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRU-SBSPON PTPRU chr1 29236717 + SBSPON chr8 73071870 - Exonic hg38 LUAD TCGA-78-7153-01A 1 7 In-Frame Inter-chr p35.3 q21.11 94145 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK3-ZHX2 STK3 chr8 98749276 - ZHX2 chr8 122951292 + Exonic hg38 LUAD TCGA-78-7153-01A 2 3 CDS-5'UTR Intra-chr q22.2 q24.13 Tumor suppressor gene Transcription factor Seq+ 94146 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASAP1-LRRCC1 ASAP1 chr8 130236922 - LRRCC1 chr8 85145389 + Exonic hg38 LUAD TCGA-78-7153-01A 1 6 Out-of-frame Intra-chr q24.22 q21.2 Seq+ 94147 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4A-RYBP KDM4A chr1 43683804 + RYBP chr3 72379427 - Exonic hg38 LUAD TCGA-78-7153-01A 1 5 CDS-5'UTR Inter-chr p34.2 Seq+ 94148 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRRAP-TMEM168 TRRAP chr7 98955304 + TMEM168 chr7 112784953 - Exonic hg38 LUAD TCGA-78-7154-01A 3 28 CDS-5'UTR Intra-chr q22.1 Atypical:PIKK Oncogene q31.1 Seq+ 94149 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGFG2-ARPC1A AGFG2 chr7 100564303 + ARPC1A chr7 99363543 + Exonic hg38 LUAD TCGA-78-7154-01A 1 33 Out-of-frame Intra-chr q22.1 q22.1 94150 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIPK2-ADCK2 HIPK2 chr7 139777605 - ADCK2 chr7 140674611 + Exonic hg38 LUAD TCGA-78-7154-01A 3 15 Out-of-frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Atypical:ABC1 Seq+ 94151 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMYM5-IFT88 ZMYM5 chr13 19851355 - IFT88 chr13 20641290 + Exonic hg38 LUAD TCGA-78-7154-01A 2 15 In-Frame Intra-chr q12.11 q12.11 Tumor suppressor gene Seq+ 94152 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPATA6-BEND5 SPATA6 chr1 48305787 - BEND5 chr1 48728043 - Exonic hg38 LUAD TCGA-78-7154-01A 3 8 Out-of-frame Intra-chr p33 p33 Seq+ 94153 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAG3L5P-IMMP2L STAG3L5P chr7 100345968 + IMMP2L chr7 111521449 - Exonic hg38 LUAD TCGA-78-7154-01A 1 13 3'UTR-5'UTR Intra-chr q22.1 q31.1 94154 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC91-HCG18 CCDC91 chr12 28307749 + HCG18 chr6 30314482 - Exonic hg38 LUAD TCGA-78-7154-01A 2 8 CDS-5'UTR Inter-chr p11.22 94155 ChimerSeq TCGA FAWG TCGA_RNA-Seq EAPP-SNX6 EAPP chr14 34533444 - SNX6 chr14 34568013 - Exonic hg38 LUAD TCGA-78-7155-01A 18 38 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 94156 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC24A-DDX46 SEC24A chr5 134666996 + DDX46 chr5 134777574 + Exonic hg38 LUAD TCGA-78-7155-01A 12 34 In-Frame Intra-chr q31.1 q31.1 Seq+ 94157 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLO1-CASC15 GLO1 chr6 38702971 - CASC15 chr6 22214307 + Exonic hg38 LUAD TCGA-78-7155-01A 7 50 CDS-3'UTR Intra-chr p21.2 p22.3 94158 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM9SF1-NPAS3 TM9SF1 chr14 24192648 - NPAS3 chr14 33612405 + Exonic hg38 LUAD TCGA-78-7155-01A 3 52 5'UTR-CDS Intra-chr q12 q13.1 Transcription factor 94159 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFCAB2-SDCCAG8 EFCAB2 chr1 245059458 + SDCCAG8 chr1 243286272 + Exonic hg38 LUAD TCGA-78-7155-01A 2 12 CDS-3'UTR Intra-chr q44 Seq+ 94160 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP85-FAM110D CEP85 chr1 26244318 + FAM110D chr1 26161212 + Exonic hg38 LUAD TCGA-78-7155-01A 1 11 CDS-5'UTR Intra-chr p36.11 p36.11 94161 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK13-AMPH CDK13 chr7 40002031 + AMPH chr7 38535011 - Exonic hg38 LUAD TCGA-78-7155-01A 2 2 Out-of-frame Intra-chr p14.1 p14.1 Seq+ 94162 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1D-ASIC2 MYO1D chr17 32876778 - ASIC2 chr17 33028392 - Exonic hg38 LUAD TCGA-78-7155-01A 1 2 Out-of-frame Intra-chr q11.2 q12 94163 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUF2-TIMM17A NUF2 chr1 163347938 + TIMM17A chr1 201957281 + Exonic hg38 LUAD TCGA-78-7159-01A 3 5 In-Frame Intra-chr q23.3 q32.1 Seq+ 94164 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFV2-MIR3976HG NDUFV2 chr18 9122681 + MIR3976HG chr18 5793587 + Exonic hg38 LUAD TCGA-78-7161-01A 5 123 CDS-5'UTR Intra-chr p11.22 p11.31 94165 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK1-CNIH4 PAK1 chr11 77392331 - CNIH4 chr1 224365879 + Exonic hg38 LUAD TCGA-78-7161-01A 11 56 Out-of-frame Inter-chr q14.1 STE:STE20 q42.11 Seq+ 94166 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAPGEF6-SUSD4 RAPGEF6 chr5 131592383 - SUSD4 chr1 223235100 - Exonic hg38 LUAD TCGA-78-7161-01A 11 28 Out-of-frame Inter-chr q31.1 q41 Seq+ 94167 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYL12A-LPIN2 MYL12A chr18 3254050 + LPIN2 chr18 2960849 - Exonic hg38 LUAD TCGA-78-7161-01A 4 21 CDS-5'UTR Intra-chr p11.31 p11.31 Seq+ 94168 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFTPB-C3 SFTPB chr2 85665289 - C3 chr19 6696659 - Exonic hg38 LUAD TCGA-78-7161-01A 1 32 In-Frame Inter-chr p11.2 p13.3 94169 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSC22D1-PLEKHA5 TSC22D1 chr13 44573163 - PLEKHA5 chr12 19274516 + Exonic hg38 LUAD TCGA-78-7161-01A 3 19 In-Frame Inter-chr q14.11 Tumor suppressor gene Transcription factor p12.3 Seq+ 94170 ChimerSeq TCGA FAWG TCGA_RNA-Seq TWSG1-MYL12A TWSG1 chr18 9360071 + MYL12A chr18 3253233 + Exonic hg38 LUAD TCGA-78-7161-01A 2 21 Out-of-frame Intra-chr p11.22 p11.31 Seq+ 94171 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGM2L1-RBBP5 PGM2L1 chr11 74398051 - RBBP5 chr1 205105168 - Exonic hg38 LUAD TCGA-78-7161-01A 4 2 Out-of-frame Inter-chr q13.4 q32.1 Seq+ 94172 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLEU2-BMP4 DLEU2 chr13 50068097 - BMP4 chr14 53953400 - Exonic hg38 LUAD TCGA-78-7161-01A 2 8 3'UTR-3'UTR Inter-chr q14.2 Tumor suppressor gene q22.2 Tumor suppressor gene Seq+ 94173 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-WNT11 SHANK2 chr11 70798443 - WNT11 chr11 76191856 - Exonic hg38 LUAD TCGA-78-7161-01A 1 7 Out-of-frame Intra-chr q13.4 q13.5 Tumor suppressor gene Seq+ 94174 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPIN2-PARP4 LPIN2 chr18 2954504 - PARP4 chr13 24503777 - Exonic hg38 LUAD TCGA-78-7161-01A 1 6 CDS-5'UTR Inter-chr p11.31 q12.12 94175 ChimerSeq TCGA FAWG TCGA_RNA-Seq FANCA-CACNA2D4 FANCA chr16 89752138 - CACNA2D4 chr12 1846689 - Exonic hg38 LUAD TCGA-78-7161-01A 1 3 CDS-5'UTR Inter-chr q24.3 Oncogene p13.33 Seq+ 94176 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSNARE1-FAM49B TSNARE1 chr8 142284413 - FAM49B chr8 129879471 - Exonic hg38 LUAD TCGA-78-7161-01A 1 3 CDS-5'UTR Intra-chr q24.3 q24.21 94177 ChimerSeq TCGA FAWG TCGA_RNA-Seq IQSEC1-GSTM3 IQSEC1 chr3 12967387 - GSTM3 chr1 109739493 - Exonic hg38 LUAD TCGA-78-7161-01A 1 2 Out-of-frame Inter-chr p25.2 p13.3 Seq+ 94178 ChimerSeq TCGA FAWG TCGA_RNA-Seq EML4-ALK EML4 chr2 42295516 + ALK chr2 29223528 - Exonic hg38 LUAD TCGA-78-7163-01A 27 64 In-Frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 94179 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSPP1-MAN1A2 CSPP1 chr8 67159137 + MAN1A2 chr1 117402186 + Exonic hg38 LUAD TCGA-78-7167-01A 1 14 Out-of-frame Inter-chr q13.1 p12 Seq+ 94180 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLGA5-RIN3 GOLGA5 chr14 92833347 + RIN3 chr14 92641238 + Exonic hg38 LUAD TCGA-78-7220-01A 3 15 Out-of-frame Intra-chr q32.12 q32.12 Seq+ 94181 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNK1-B4GALNT3 WNK1 chr12 862270 + B4GALNT3 chr12 535166 + Exonic hg38 LUAD TCGA-78-7220-01A 1 16 Out-of-frame Intra-chr p13.33 p13.33 KB Pub Seq+ 94182 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC16A14-SP110 SLC16A14 chr2 230049761 - SP110 chr2 230211553 - Exonic hg38 LUAD TCGA-78-7536-01A 248 1006 In-Frame Intra-chr q36.3 q37.1 Transcription factor Seq+ 94183 ChimerSeq TCGA FAWG TCGA_RNA-Seq MVB12B-TMC1 MVB12B chr9 126395697 + TMC1 chr9 72740119 + Exonic hg38 LUAD TCGA-78-7536-01A 4 42 In-Frame Intra-chr q33.3 q21.13 Seq+ 94184 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC4-SNX18 HDAC4 chr2 239236593 - SNX18 chr5 54543179 + Exonic hg38 LUAD TCGA-78-7536-01A 4 33 In-Frame Inter-chr q37.3 q11.2 Seq+ 94185 ChimerSeq TCGA FAWG TCGA_RNA-Seq STRBP-ASTN2 STRBP chr9 123169902 - ASTN2 chr9 116651793 - Exonic hg38 LUAD TCGA-78-7536-01A 7 21 In-Frame Intra-chr q33.3 q33.1 Seq+ 94186 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS8-PRH2 EPS8 chr12 15789161 - PRH2 chr12 10930269 + Exonic hg38 LUAD TCGA-78-7536-01A 5 15 5'UTR-3'UTR Intra-chr p12.3 Seq+ 94187 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R13B-BAG5 PPP1R13B chr14 103847299 - BAG5 chr14 103561192 - Exonic hg38 LUAD TCGA-78-7536-01A 4 9 Out-of-frame Intra-chr q32.33 q32.33 Seq+ 94188 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC1-NR4A2 TANC1 chr2 159001189 + NR4A2 chr2 156330791 - Exonic hg38 LUAD TCGA-78-7536-01A 5 3 5'UTR-5'UTR Intra-chr q24.2 q24.1 Transcription factor Seq+ 94189 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLNS1A-SMIM15 CLNS1A chr11 77637590 - SMIM15 chr5 61161227 - Exonic hg38 LUAD TCGA-78-7536-01A 5 1 CDS-5'UTR Inter-chr q14.1 q12.1 Seq+ 94190 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF268-ASB1 ZNF268 chr12 133182030 + ASB1 chr2 238444342 + Exonic hg38 LUAD TCGA-78-7536-01A 2 6 Out-of-frame Inter-chr q24.33 Transcription factor q37.3 Seq+ 94191 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTD1-MACROD2 DTD1 chr20 18744271 + MACROD2 chr20 14888143 + Exonic hg38 LUAD TCGA-78-7536-01A 3 1 3'UTR-CDS Intra-chr p11.23 p12.1 94192 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMPR2-KANSL1L BMPR2 chr2 202377550 + KANSL1L chr2 210098207 - Exonic hg38 LUAD TCGA-78-7539-01A 11 38 3'UTR-CDS Intra-chr q33.1 TKL:STKR Tumor suppressor gene q34 Seq+ 94193 ChimerSeq TCGA FAWG TCGA_RNA-Seq THBS3-HDGF THBS3 chr1 155206200 - HDGF chr1 156745373 - Exonic hg38 LUAD TCGA-78-7539-01A 3 8 Out-of-frame Intra-chr q22 q23.1 Seq+ 94194 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD17-SQRDL ANKRD17 chr4 73258276 - SQRDL chr15 45658907 + Exonic hg38 LUAD TCGA-78-7539-01A 3 4 Out-of-frame Inter-chr q13.3 Seq+ 94195 ChimerSeq TCGA FAWG TCGA_RNA-Seq NINL-GBAS NINL chr20 25496663 - GBAS chr7 55983728 + Exonic hg38 LUAD TCGA-78-7539-01A 2 7 Out-of-frame Inter-chr p11.21 Seq+ 94196 ChimerSeq TCGA FAWG TCGA_RNA-Seq MET-CNTNAP5 MET chr7 116700284 + CNTNAP5 chr2 124242200 + Exonic hg38 LUAD TCGA-78-7542-01A 4 67 Out-of-frame Inter-chr q31.2 TK:Met Oncogene q14.3 Seq+ 94197 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPF4B-CDYL PRPF4B chr6 4021466 + CDYL chr6 4935515 + Exonic hg38 LUAD TCGA-78-7542-01A 8 22 Out-of-frame Intra-chr p25.2 p25.1 Seq+ 94198 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFR3A-ZFAT EFR3A chr8 131987702 + ZFAT chr8 134565421 - Exonic hg38 LUAD TCGA-78-8640-01A 13 75 In-Frame Intra-chr q24.22 q24.22 Transcription factor Seq+ 94199 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFR3A-PHF20L1 EFR3A chr8 131904322 + PHF20L1 chr8 132811046 + Exonic hg38 LUAD TCGA-78-8640-01A 7 13 In-Frame Intra-chr q24.22 q24.22 Seq+ 94200 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASAL2-GALNTL6 RASAL2 chr1 178300118 + GALNTL6 chr4 172809361 + Exonic hg38 LUAD TCGA-78-8640-01A 2 4 In-Frame Inter-chr q25.2 Tumor suppressor gene q34.1 Seq+ 94201 ChimerSeq TCGA FAWG TCGA_RNA-Seq FUOM-DOCK1 FUOM chr10 133357923 - DOCK1 chr10 127257335 + Exonic hg38 LUAD TCGA-78-8640-01A 1 7 Out-of-frame Intra-chr q26.3 q26.2 94202 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R13L-OPA3 PPP1R13L chr19 45391880 - OPA3 chr19 45529456 - Exonic hg38 LUAD TCGA-78-8640-01A 1 3 Out-of-frame Intra-chr q13.32 q13.32 Seq+ 94203 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPEPPS-KPNB1 NPEPPS chr17 47531555 + KPNB1 chr17 47663089 + Exonic hg38 LUAD TCGA-78-8648-01A 2 3 In-Frame Intra-chr q21.32 q21.32 Seq+ 94204 ChimerSeq TCGA FAWG TCGA_RNA-Seq INSR-WDR62 INSR chr19 7267345 - WDR62 chr19 36089038 + Exonic hg38 LUAD TCGA-78-8655-01A 1 3 In-Frame Intra-chr p13.2 TK:InsR q13.12 94205 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBFB-NUTF2 CBFB chr16 67036755 + NUTF2 chr16 67868340 + Exonic hg38 LUAD TCGA-78-8660-01A 47 153 In-Frame Intra-chr q22.1 q22.1 Seq+ 94206 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5394440 - RNF216 chr7 5624125 - Exonic hg38 LUAD TCGA-78-8660-01A 13 44 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 94207 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIF1A-LRRC9 HIF1A chr14 61695839 + LRRC9 chr14 59944589 + Exonic hg38 LUAD TCGA-78-8660-01A 9 54 Out-of-frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 Seq+ 94208 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2A1-KIAA0391 GTF2A1 chr14 81216413 - KIAA0391 chr14 35180670 + Exonic hg38 LUAD TCGA-78-8660-01A 15 26 Out-of-frame Intra-chr q31.1 q13.2 Seq+ 94209 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAFB2-LONP1 SAFB2 chr19 5598793 - LONP1 chr19 5708403 - Exonic hg38 LUAD TCGA-78-8660-01A 10 25 In-Frame Intra-chr p13.3 Tumor suppressor gene Transcription factor p13.3 Seq+ 94210 ChimerSeq TCGA FAWG TCGA_RNA-Seq INPP5B-SF3A3 INPP5B chr1 37872930 - SF3A3 chr1 37969735 - Exonic hg38 LUAD TCGA-78-8660-01A 8 30 In-Frame Intra-chr p34.3 p34.3 Seq+ 94211 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERCC1-CEACAM5 ERCC1 chr19 45478736 - CEACAM5 chr19 41727234 + Exonic hg38 LUAD TCGA-78-8660-01A 5 26 5'UTR-CDS Intra-chr q13.32 Oncogene q13.2 94212 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO34-HECTD1 FBXO34 chr14 55271537 + HECTD1 chr14 31169468 - Exonic hg38 LUAD TCGA-78-8660-01A 2 36 5'UTR-CDS Intra-chr q22.3 q12 Seq+ 94213 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMOX2-CDIP1 HMOX2 chr16 4476487 + CDIP1 chr16 4514664 - Exonic hg38 LUAD TCGA-78-8660-01A 5 17 3'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 94214 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALY-DEFB123 RALY chr20 33994131 + DEFB123 chr20 31450029 + Exonic hg38 LUAD TCGA-78-8660-01A 3 19 5'UTR-CDS Intra-chr q11.22 q11.21 Seq+ 94215 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAZ1A-LRRC9 BAZ1A chr14 34862044 - LRRC9 chr14 59978017 + Exonic hg38 LUAD TCGA-78-8660-01A 1 6 Out-of-frame Intra-chr q13.2 q23.1 94216 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBCK1-MACROD2 RBCK1 chr20 408779 + MACROD2 chr20 14493479 + Exonic hg38 LUAD TCGA-78-8660-01A 1 5 In-Frame Intra-chr p13 Transcription factor p12.1 94217 ChimerSeq TCGA FAWG TCGA_RNA-Seq SQRDL-SPATA5L1 SQRDL chr15 45635108 + SPATA5L1 chr15 45405320 + Exonic hg38 LUAD TCGA-78-8662-01A 1 4 Out-of-frame Intra-chr q21.1 94218 ChimerSeq TCGA FAWG TCGA_RNA-Seq YEATS4-SLC35E3 YEATS4 chr12 69365884 + SLC35E3 chr12 68759157 + Exonic hg38 LUAD TCGA-78-8662-01A 1 4 In-Frame Intra-chr q15 q15 Seq+ 94219 ChimerSeq TCGA FAWG TCGA_RNA-Seq HCG18-TINAG HCG18 chr6 30294471 - TINAG chr6 54389791 + Exonic hg38 LUAD TCGA-80-5607-01A 1 5 5'UTR-CDS Intra-chr p12.1 94220 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1B-PARK2 ARID1B chr6 156829421 + PARK2 chr6 162443473 - Exonic hg38 LUAD TCGA-80-5608-01A 2 20 Out-of-frame Intra-chr q25.3 Oncogene Tumor suppressor gene Seq+ 94221 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRK-FGF7 PTPRK chr6 128184432 - FGF7 chr15 49483151 + Exonic hg38 LUAD TCGA-80-5608-01A 6 3 5'UTR-CDS Inter-chr Tumor suppressor gene q21.2 Seq+ 94222 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDC4-TSHZ2 SDC4 chr20 45348325 - TSHZ2 chr20 53487144 + Exonic hg38 LUAD TCGA-80-5608-01A 2 14 CDS-3'UTR Intra-chr q13.12 q13.2 Transcription factor Seq+ 94223 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFTPB-RPLP0 SFTPB chr2 85662029 - RPLP0 chr12 120198631 - Exonic hg38 LUAD TCGA-80-5608-01A 2 8 In-Frame Inter-chr p11.2 q24.23 94224 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP5B-CALCA ATP5B chr12 56645837 - CALCA chr11 14971201 - Exonic hg38 LUAD TCGA-80-5608-01A 1 1 Out-of-frame Inter-chr q13.3 p15.2 94225 ChimerSeq TCGA FAWG TCGA_RNA-Seq FHDC1-ARFIP1 FHDC1 chr4 152954319 + ARFIP1 chr4 152910064 + Exonic hg38 LUAD TCGA-80-5611-01A 13 74 In-Frame Intra-chr q31.3 q31.3 Seq+ 94226 ChimerSeq TCGA FAWG TCGA_RNA-Seq YWHAE-SPNS3 YWHAE chr17 1361092 - SPNS3 chr17 4478572 + Exonic hg38 LUAD TCGA-80-5611-01A 7 12 5'UTR-CDS Intra-chr p13.3 p13.2 Seq+ 94227 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHCYL1-LRRIQ3 AHCYL1 chr1 109985172 + LRRIQ3 chr1 74109553 - Exonic hg38 LUAD TCGA-80-5611-01A 2 9 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p31.1 Seq+ 94228 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZSCAN22-ZNF418 ZSCAN22 chr19 58327114 + ZNF418 chr19 57923289 - Exonic hg38 LUAD TCGA-80-5611-01A 3 5 5'UTR-3'UTR Intra-chr q13.43 Transcription factor q13.43 Transcription factor Seq+ 94229 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPNE8-CNTN1 CPNE8 chr12 38873004 - CNTN1 chr12 41014228 + Exonic hg38 LUAD TCGA-80-5611-01A 2 6 Out-of-frame Intra-chr q12 q12 Seq+ 94230 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13-TLDC2 MED13 chr17 62052537 - TLDC2 chr20 36887455 + Exonic hg38 LUAD TCGA-83-5908-01A 22 71 Out-of-frame Inter-chr q23.2 q11.23 94231 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC2-SPAG9 TANC2 chr17 63009626 + SPAG9 chr17 51079704 - Exonic hg38 LUAD TCGA-83-5908-01A 23 62 Out-of-frame Intra-chr q23.2 q21.33 Seq+ 94232 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRD9-TPPP BRD9 chr5 886592 - TPPP chr5 666123 - Exonic hg38 LUAD TCGA-83-5908-01A 14 43 In-Frame Intra-chr p15.33 p15.33 Seq+ 94233 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK8-OSBP DOCK8 chr9 390566 + OSBP chr11 59601838 - Exonic hg38 LUAD TCGA-83-5908-01A 10 37 In-Frame Inter-chr p24.3 q12.1 Seq+ 94234 ChimerSeq TCGA FAWG TCGA_RNA-Seq EARS2-VMP1 EARS2 chr16 23544514 - VMP1 chr17 59838295 + Exonic hg38 LUAD TCGA-83-5908-01A 8 45 In-Frame Inter-chr p12.2 q23.1 Seq+ 94235 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNND1-DOCK8 CTNND1 chr11 57806983 + DOCK8 chr9 304581 + Exonic hg38 LUAD TCGA-83-5908-01A 7 19 Out-of-frame Inter-chr q12.1 Tumor suppressor gene p24.3 Seq+ 94236 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANK2-DOCK6 KANK2 chr19 11197484 - DOCK6 chr19 11204330 - Exonic hg38 LUAD TCGA-83-5908-01A 8 6 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 94237 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMHD1-RPN2 SAMHD1 chr20 36904157 - RPN2 chr20 37184180 + Exonic hg38 LUAD TCGA-83-5908-01A 6 14 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 94238 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIC1-DCAF10 RIC1 chr9 5656690 + DCAF10 chr9 37819288 + Exonic hg38 LUAD TCGA-83-5908-01A 3 25 Out-of-frame Intra-chr p24.1 p13.2 94239 ChimerSeq TCGA FAWG TCGA_RNA-Seq JAK2-CSTF3 JAK2 chr9 4986022 + CSTF3 chr11 33087141 - Exonic hg38 LUAD TCGA-83-5908-01A 1 9 5'UTR-5'UTR Inter-chr p24.1 TK:JakA Oncogene p13 Seq+ 94240 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLIS3-ARHGAP1 GLIS3 chr9 4299421 - ARHGAP1 chr11 46696156 - Exonic hg38 LUAD TCGA-83-5908-01A 1 3 5'UTR-5'UTR Inter-chr p24.2 Transcription factor p11.2 Seq+ 94241 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMED2-RFLNA TMED2 chr12 123590449 + RFLNA chr12 124311818 + Exonic hg38 LUAD TCGA-86-6851-01A 16 73 Out-of-frame Intra-chr q24.31 q24.31 94242 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC17-RNFT2 ZDHHC17 chr12 76764329 + RNFT2 chr12 116833792 + Exonic hg38 LUAD TCGA-86-6851-01A 3 4 In-Frame Intra-chr q21.2 q24.22 Seq+ 94243 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB2-SLC25A19 GRB2 chr17 75393551 - SLC25A19 chr17 75283593 - Exonic hg38 LUAD TCGA-86-6851-01A 2 1 In-Frame Intra-chr q25.1 q25.1 Seq+ 94244 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR2H-CHFR POLR2H chr3 184363565 + CHFR chr12 132833237 - Exonic hg38 LUAD TCGA-86-7701-01A 5 15 CDS-3'UTR Inter-chr q27.1 q24.33 Tumor suppressor gene 94245 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPP3-KDM2A DPP3 chr11 66497477 + KDM2A chr11 67228037 + Exonic hg38 LUAD TCGA-86-7701-01A 2 8 In-Frame Intra-chr q13.2 q13.2 Transcription factor Seq+ 94246 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP4R1-CDH7 PPP4R1 chr18 9577064 - CDH7 chr18 65880401 + Exonic hg38 LUAD TCGA-86-7711-01A 1 4 Out-of-frame Intra-chr p11.22 q22.1 94247 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSGIN2-RIPK2 OSGIN2 chr8 89909721 + RIPK2 chr8 89789321 + Exonic hg38 LUAD TCGA-86-7711-01A 1 3 In-Frame Intra-chr q21.3 q21.3 TKL:RIPK Seq+ 94248 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE4D-CRABP1 PDE4D chr5 59038859 - CRABP1 chr15 78347927 + Exonic hg38 LUAD TCGA-86-7713-01A 203 413 In-Frame Inter-chr q12.1 q25.1 Seq+ 94249 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC14A2-PCAT1 SLC14A2 chr18 45213191 + PCAT1 chr8 127006555 + Exonic hg38 LUAD TCGA-86-7713-01A 8 24 5'UTR-5'UTR Inter-chr q12.3 q24.21 94250 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAX-TEX10 MAX chr14 65093708 - TEX10 chr9 100349372 - Exonic hg38 LUAD TCGA-86-7953-01A 31 31 5'UTR-5'UTR Inter-chr q23.3 Oncogene Tumor suppressor gene Transcription factor q31.1 Seq+ 94251 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF3-RHAG ARHGEF3 chr3 56882292 - RHAG chr6 49619362 - Exonic hg38 LUAD TCGA-86-7953-01A 15 67 Out-of-frame Inter-chr p14.3 p12.3 Seq+ 94252 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRF5-ADGRF1 ADGRF5 chr6 46883559 - ADGRF1 chr6 47029104 - Exonic hg38 LUAD TCGA-86-7953-01A 11 22 CDS-5'UTR Intra-chr p12.3 p12.3 94253 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF14-STAT5A ZNF14 chr19 19732956 - STAT5A chr17 42295619 + Exonic hg38 LUAD TCGA-86-7953-01A 1 22 In-Frame Inter-chr p13.11 Transcription factor q21.2 Tumor suppressor gene Transcription factor Seq+ 94254 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIP12-BARD1 TRIP12 chr2 229879982 - BARD1 chr2 214730508 - Exonic hg38 LUAD TCGA-86-7953-01A 2 4 Out-of-frame Intra-chr q36.3 q35 Tumor suppressor gene Seq+ 94255 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDC4-NRG1 SDC4 chr20 45330366 - NRG1 chr8 32727949 + Exonic hg38 LUAD TCGA-86-7954-01A 1092 5225 In-Frame Inter-chr q13.12 p12 KB Pub Seq+ 94256 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM6A-ETFBKMT KDM6A chrX 44873987 + ETFBKMT chr12 31661841 + Exonic hg38 LUAD TCGA-86-7954-01A 57 89 5'UTR-5'UTR Inter-chr p11.3 Oncogene Tumor suppressor gene p11.21 94257 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP32-HOXB9 USP32 chr17 60255175 - HOXB9 chr17 48622099 - Exonic hg38 LUAD TCGA-86-7954-01A 9 102 CDS-3'UTR Intra-chr q23.2 q21.32 Transcription factor Seq+ 94258 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRA2A-EPDR1 TRA2A chr7 23531789 - EPDR1 chr7 37948840 + Exonic hg38 LUAD TCGA-86-7954-01A 19 49 Out-of-frame Intra-chr p15.3 p14.1 Seq+ 94259 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP9X-KDM6A USP9X chrX 41171958 + KDM6A chrX 45010961 + Exonic hg38 LUAD TCGA-86-7954-01A 22 27 Out-of-frame Intra-chr p11.4 Oncogene p11.3 Oncogene Tumor suppressor gene Seq+ 94260 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM2-PLEKHA5 R3HDM2 chr12 57395749 - PLEKHA5 chr12 19253940 + Exonic hg38 LUAD TCGA-86-7954-01A 13 17 5'UTR-5'UTR Intra-chr q13.3 p12.3 94261 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM10-CMAS RBM10 chrX 47147498 + CMAS chr12 22055149 + Exonic hg38 LUAD TCGA-86-7954-01A 8 32 In-Frame Inter-chr p11.3 p12.1 Seq+ 94262 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESYT1-MED14 ESYT1 chr12 56139013 + MED14 chrX 40655060 - Exonic hg38 LUAD TCGA-86-7954-01A 5 31 In-Frame Inter-chr q13.2 p11.4 Seq+ 94263 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM2-CAPRIN2 R3HDM2 chr12 57395749 - CAPRIN2 chr12 30751133 - Exonic hg38 LUAD TCGA-86-7954-01A 4 30 5'UTR-5'UTR Intra-chr q13.3 p11.21 Seq+ 94264 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTAP-POC1B MTAP chr9 21802781 + POC1B chr12 89492115 - Exonic hg38 LUAD TCGA-86-7954-01A 5 15 Out-of-frame Inter-chr p21.3 Tumor suppressor gene q21.33 Seq+ 94265 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST8SIA1-ABCC9 ST8SIA1 chr12 22255280 - ABCC9 chr12 21829060 - Exonic hg38 LUAD TCGA-86-7954-01A 3 13 In-Frame Intra-chr p12.1 p12.1 Seq+ 94266 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD6-ABHD12 CHD6 chr20 41512846 - ABHD12 chr20 25323430 - Exonic hg38 LUAD TCGA-86-7954-01A 2 12 Out-of-frame Intra-chr q12 p11.21 Seq+ 94267 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASC1-PLEKHA5 CASC1 chr12 25195076 - PLEKHA5 chr12 19253940 + Exonic hg38 LUAD TCGA-86-7954-01A 3 3 Out-of-frame Intra-chr p12.1 Tumor suppressor gene p12.3 Seq+ 94268 ChimerSeq TCGA FAWG TCGA_RNA-Seq COX14-USP9X COX14 chr12 50112301 + USP9X chrX 41223217 + Exonic hg38 LUAD TCGA-86-7954-01A 1 2 5'UTR-CDS Inter-chr q13.12 p11.4 Oncogene 94269 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNK-NAF1 UNK chr17 75784984 + NAF1 chr4 163164391 - Exonic hg38 LUAD TCGA-86-7955-01A 3 23 In-Frame Inter-chr q25.1 q32.2 Seq+ 94270 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD10-MYO16 ANKRD10 chr13 110893028 - MYO16 chr13 109120370 + Exonic hg38 LUAD TCGA-86-7955-01A 6 8 Out-of-frame Intra-chr q34 Seq+ 94271 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITCH-TSHZ2 ITCH chr20 34424525 + TSHZ2 chr20 53487144 + Exonic hg38 LUAD TCGA-86-7955-01A 3 15 CDS-3'UTR Intra-chr q11.22 q13.2 Transcription factor Seq+ 94272 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGSH-TBC1D16 SGSH chr17 80217032 - TBC1D16 chr17 80013609 - Exonic hg38 LUAD TCGA-86-7955-01A 3 15 CDS-5'UTR Intra-chr q25.3 q25.3 Seq+ 94273 ChimerSeq TCGA FAWG TCGA_RNA-Seq UGDH-TLR6 UGDH chr4 39527283 - TLR6 chr4 38829537 - Exonic hg38 LUAD TCGA-86-7955-01A 2 9 5'UTR-5'UTR Intra-chr p14 p14 Seq+ 94274 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAA15-STPG2 NAA15 chr4 139361937 + STPG2 chr4 98134459 - Exonic hg38 LUAD TCGA-86-7955-01A 1 11 In-Frame Intra-chr q31.1 q23 94275 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM2A-DDR2 KDM2A chr11 67240369 + DDR2 chr1 162780112 + Exonic hg38 LUAD TCGA-86-8054-01A 10 20 In-Frame Inter-chr q13.2 Transcription factor q23.3 TK:DDR Oncogene Tumor suppressor gene Seq+ 94276 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPKAPK5-ALDH2 MAPKAPK5 chr12 111842769 + ALDH2 chr12 111799906 + Exonic hg38 LUAD TCGA-86-8054-01A 4 7 In-Frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 Seq+ 94277 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMBRA1-TAGLN AMBRA1 chr11 46593828 - TAGLN chr11 117203002 + Exonic hg38 LUAD TCGA-86-8055-01A 2 23 5'UTR-5'UTR Intra-chr p11.2 q23.3 Tumor suppressor gene Seq+ 94278 ChimerSeq TCGA FAWG TCGA_RNA-Seq IMPA2-GALNT1 IMPA2 chr18 11981765 + GALNT1 chr18 35654560 + Exonic hg38 LUAD TCGA-86-8055-01A 1 2 CDS-5'UTR Intra-chr p11.21 q12.2 94279 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAB2-CCNG2 TAB2 chr6 149318015 + CCNG2 chr4 77158533 + Exonic hg38 LUAD TCGA-86-8056-01A 6 4 5'UTR-5'UTR Inter-chr q25.1 q21.1 94280 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARS-NBPF19 RARS chr5 168510686 + NBPF19 chr1 149408821 + Exonic hg38 LUAD TCGA-86-8056-01A 1 4 CDS-5'UTR Inter-chr q34 q21.2 94281 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK10-SLIT3 STK10 chr5 172156624 - SLIT3 chr5 168700679 - Exonic hg38 LUAD TCGA-86-8056-01A 1 3 In-Frame Intra-chr q35.1 Tumor suppressor gene q35.1 94282 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCFD2-NARS2 SCFD2 chr4 53352598 - NARS2 chr11 78469313 - Exonic hg38 LUAD TCGA-86-8074-01A 13 60 In-Frame Inter-chr q12 q14.1 Seq+ 94283 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-KCNE3 UVRAG chr11 75852000 + KCNE3 chr11 74462103 - Exonic hg38 LUAD TCGA-86-8074-01A 2 24 CDS-5'UTR Intra-chr q13.5 Tumor suppressor gene q13.4 Seq+ 94284 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF169-MIR4300HG RNF169 chr11 74789699 + MIR4300HG chr11 82100207 - Exonic hg38 LUAD TCGA-86-8074-01A 1 16 CDS-3'UTR Intra-chr q13.4 q14.1 94285 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYTH3-SPATA18 CYTH3 chr7 6177823 - SPATA18 chr4 52069821 + Exonic hg38 LUAD TCGA-86-8074-01A 2 6 In-Frame Inter-chr p22.1 q12 Seq+ 94286 ChimerSeq TCGA FAWG TCGA_RNA-Seq SECISBP2-NEDD4L SECISBP2 chr9 89341479 + NEDD4L chr18 58396167 + Exonic hg38 LUAD TCGA-86-8075-01A 15 64 Out-of-frame Inter-chr q22.2 q21.31 Tumor suppressor gene Seq+ 94287 ChimerSeq TCGA FAWG TCGA_RNA-Seq FHOD3-MYOM1 FHOD3 chr18 36372744 + MYOM1 chr18 3102630 - Exonic hg38 LUAD TCGA-86-8075-01A 17 36 In-Frame Intra-chr q12.2 p11.31 Seq+ 94288 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFV2-CHST9 NDUFV2 chr18 9117903 + CHST9 chr18 26944366 - Exonic hg38 LUAD TCGA-86-8075-01A 6 21 Out-of-frame Intra-chr p11.22 q11.2 Seq+ 94289 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAPK1-AGTPBP1 DAPK1 chr9 87499139 + AGTPBP1 chr9 85621285 - Exonic hg38 LUAD TCGA-86-8075-01A 7 12 In-Frame Intra-chr q21.33 CAMK:DAPK Tumor suppressor gene q21.33 Seq+ 94290 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF570-MIR548XHG ZNF570 chr19 37476434 + MIR548XHG chr21 18612293 - Exonic hg38 LUAD TCGA-86-8075-01A 2 16 CDS-3'UTR Inter-chr q13.12 Transcription factor q21.1 94291 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRA2A-POU6F2 TRA2A chr7 23505746 - POU6F2 chr7 39132378 + Exonic hg38 LUAD TCGA-86-8075-01A 2 2 Out-of-frame Intra-chr p15.3 p14.1 Tumor suppressor gene Transcription factor 94292 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD74-ROS1 CD74 chr5 150404680 - ROS1 chr6 117324415 - Exonic hg38 LUAD TCGA-86-8278-01A 92 283 In-Frame Inter-chr q33.1 q22.1 Oncogene KB Pub Seq+ 94293 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROS1-CD74 ROS1 chr6 117379059 - CD74 chr5 150402625 - Exonic hg38 LUAD TCGA-86-8278-01A 71 341 Out-of-frame Inter-chr q22.1 Oncogene q33.1 Seq+ 94294 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1429-PNLIPRP1 KIAA1429 chr8 94543827 - PNLIPRP1 chr10 116591130 + Exonic hg38 LUAD TCGA-86-8279-01A 5 9 Out-of-frame Inter-chr q22.1 q25.3 Seq+ 94295 ChimerSeq TCGA FAWG TCGA_RNA-Seq WSB1-XKR4 WSB1 chr17 27294435 + XKR4 chr8 55357678 + Exonic hg38 LUAD TCGA-86-8279-01A 2 17 Out-of-frame Inter-chr q11.1 q12.1 Seq+ 94296 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP9A-MACROD2 ATP9A chr20 51627600 - MACROD2 chr20 15862745 + Exonic hg38 LUAD TCGA-86-8280-01A 1 6 In-Frame Intra-chr q13.2 p12.1 Seq+ 94297 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF3H-ZNF596 EIF3H chr8 116755666 - ZNF596 chr8 240824 + Exonic hg38 LUAD TCGA-86-8280-01A 1 4 CDS-5'UTR Intra-chr q24.11 p23.3 Transcription factor 94298 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP1B1-RCSD1 ATP1B1 chr1 169130090 + RCSD1 chr1 167683900 + Exonic hg38 LUAD TCGA-86-8281-01A 121 456 In-Frame Intra-chr q24.2 q24.2 Seq+ 94299 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDC80-TTC39C NDC80 chr18 2610861 + TTC39C chr18 24123834 + Exonic hg38 LUAD TCGA-86-8358-01A 10 20 Out-of-frame Intra-chr p11.32 q11.2 Seq+ 94300 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2B-RPRD1A KMT2B chr19 35735333 + RPRD1A chr18 35993268 - Exonic hg38 LUAD TCGA-86-8358-01A 6 34 Out-of-frame Inter-chr q13.12 Oncogene Transcription factor q12.2 94301 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNE2-ACTN1 SYNE2 chr14 63853143 + ACTN1 chr14 68912242 - Exonic hg38 LUAD TCGA-86-8358-01A 8 21 5'UTR-CDS Intra-chr q23.2 q24.1 Seq+ 94302 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSP90AA1-IGHM HSP90AA1 chr14 102101875 - IGHM chr14 105856217 - Exonic hg38 LUAD TCGA-86-8358-01A 5 13 Out-of-frame Intra-chr q32.31 Oncogene q32.33 94303 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTDH-MATN2 MTDH chr8 97661173 + MATN2 chr8 97930953 + Exonic hg38 LUAD TCGA-86-8358-01A 4 4 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 94304 ChimerSeq TCGA FAWG TCGA_RNA-Seq APOPT1-ASPG APOPT1 chr14 103574170 + ASPG chr14 104111920 + Exonic hg38 LUAD TCGA-86-8358-01A 3 5 Out-of-frame Intra-chr q32.33 q32.33 Seq+ 94305 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB39A-TECTA RAB39A chr11 107928795 + TECTA chr11 121187832 + Exonic hg38 LUAD TCGA-86-8358-01A 2 9 In-Frame Intra-chr q22.3 q23.3 Seq+ 94306 ChimerSeq TCGA FAWG TCGA_RNA-Seq APBA2-NBEAP1 APBA2 chr15 28995806 + NBEAP1 chr15 20671268 - Exonic hg38 LUAD TCGA-86-8358-01A 2 7 3'UTR-5'UTR Intra-chr q11.2 Seq+ 94307 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK3-KIF26A MARK3 chr14 103428440 + KIF26A chr14 104152015 + Exonic hg38 LUAD TCGA-86-8358-01A 2 7 In-Frame Intra-chr q32.32 CAMK:CAMKL q32.33 Seq+ 94308 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARP6-MYO9A PARP6 chr15 72253437 - MYO9A chr15 71968125 - Exonic hg38 LUAD TCGA-86-8358-01A 2 3 In-Frame Intra-chr q23 q23 Seq+ 94309 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRKL-SLC25A18 CRKL chr22 20934244 + SLC25A18 chr22 17579745 + Exonic hg38 LUAD TCGA-86-8358-01A 2 2 5'UTR-5'UTR Intra-chr q11.21 Oncogene q11.21 Seq+ 94310 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMK1D-FRMD4A CAMK1D chr10 12666810 + FRMD4A chr10 13858912 - Exonic hg38 LUAD TCGA-86-8358-01A 1 5 Out-of-frame Intra-chr p13 p13 94311 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP192-TPTE CEP192 chr18 12999588 + TPTE chr21 10590462 + Exonic hg38 LUAD TCGA-86-8358-01A 1 2 Out-of-frame Inter-chr p11.21 p11.2 94312 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTK2-RNF139 PTK2 chr8 140686632 - RNF139 chr8 124485831 + Exonic hg38 LUAD TCGA-86-8359-01A 5 25 Out-of-frame Intra-chr q24.3 q24.13 Seq+ 94313 ChimerSeq TCGA FAWG TCGA_RNA-Seq FASN-ZNF595 FASN chr17 82095320 - ZNF595 chr4 59430 + Exonic hg38 LUAD TCGA-86-8359-01A 3 6 Out-of-frame Inter-chr q25.3 p16.3 Transcription factor Seq+ 94314 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC4-SUPT3H EXOC4 chr7 133480138 + SUPT3H chr6 44829857 - Exonic hg38 LUAD TCGA-86-8585-01A 6 35 Out-of-frame Inter-chr q33 p21.1 Seq+ 94315 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNK1-RAD52 WNK1 chr12 889223 + RAD52 chr12 933076 - Exonic hg38 LUAD TCGA-86-8585-01A 1 15 CDS-5'UTR Intra-chr p13.33 p13.33 Seq+ 94316 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRRM3-CASC16 SRRM3 chr7 76283101 + CASC16 chr16 52591067 - Exonic hg38 LUAD TCGA-86-8668-01A 1 9 CDS-3'UTR Inter-chr q11.23 q12.2 94317 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGHG1-CTSD IGHG1 chr14 105742065 - CTSD chr11 1754131 - Exonic hg38 LUAD TCGA-86-8668-01A 1 6 Out-of-frame Inter-chr q32.33 p15.5 94318 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPIDR-UBE2V2 SPIDR chr8 47702015 + UBE2V2 chr8 48043033 + Exonic hg38 LUAD TCGA-86-8668-01A 1 4 Out-of-frame Intra-chr q11.21 q11.21 94319 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPBP1-GOLGA8B GPBP1 chr5 57247215 + GOLGA8B chr15 34546982 - Exonic hg38 LUAD TCGA-86-8669-01A 7 20 CDS-3'UTR Inter-chr q11.2 Transcription factor q14 Seq+ 94320 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRK-GEMIN4 CRK chr17 1436790 - GEMIN4 chr17 748032 - Exonic hg38 LUAD TCGA-86-8669-01A 2 27 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 94321 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEF2D-INSRR MEF2D chr1 156499432 - INSRR chr1 156858693 - Exonic hg38 LUAD TCGA-86-8669-01A 3 14 Out-of-frame Intra-chr q22 Transcription factor q23.1 94322 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0391-AKAP6 KIAA0391 chr14 35180777 + AKAP6 chr14 32821402 + Exonic hg38 LUAD TCGA-86-8669-01A 1 2 Out-of-frame Intra-chr q13.2 q12 Seq+ 94323 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST7-ASZ1 ST7 chr7 116953691 + ASZ1 chr7 117384860 - Exonic hg38 LUAD TCGA-86-8672-01A 8 60 Out-of-frame Intra-chr q31.2 Tumor suppressor gene q31.2 Seq+ 94324 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST7-ASZ1 ST7 chr7 116955153 + ASZ1 chr7 117385809 - Exonic hg38 LUAD TCGA-86-8672-01A 11 35 5'UTR-CDS Intra-chr q31.2 Tumor suppressor gene q31.2 Seq+ 94325 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST7-ASZ1 ST7 chr7 116955153 + ASZ1 chr7 117385809 - Exonic hg38 LUAD TCGA-86-8672-01A 11 26 5'UTR-CDS Intra-chr q31.2 Tumor suppressor gene q31.2 Seq+ 94326 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCA-MARCH10 PRKCA chr17 66645511 + 2019_ 3_ 10_ chr17 62801752 - Exonic hg38 LUAD TCGA-86-8672-01A 1 4 Out-of-frame Intra-chr q24.2 q23.2 94327 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETDB1-PLEKHO1 SETDB1 chr1 150930118 + PLEKHO1 chr1 150156066 + Exonic hg38 LUAD TCGA-86-8672-01A 1 4 Out-of-frame Intra-chr q21.3 Transcription factor q21.2 Tumor suppressor gene Seq+ 94328 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARNT-RIIAD1 ARNT chr1 150876543 - RIIAD1 chr1 151713469 + Exonic hg38 LUAD TCGA-86-8673-01A 65 61 5'UTR-5'UTR Intra-chr q21.3 Oncogene Transcription factor q21.3 Seq+ 94329 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC7-FOXJ1 EXOC7 chr17 76097796 - FOXJ1 chr17 76138120 - Exonic hg38 LUAD TCGA-86-8673-01A 7 62 Out-of-frame Intra-chr q25.1 q25.1 Transcription factor Seq+ 94330 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDH9A1-NME7 ALDH9A1 chr1 165682107 - NME7 chr1 169237687 - Exonic hg38 LUAD TCGA-86-8673-01A 8 33 In-Frame Intra-chr q24.1 q24.2 Seq+ 94331 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R37-CACNG1 PPP1R37 chr19 45093527 + CACNG1 chr17 67044716 + Exonic hg38 LUAD TCGA-86-8673-01A 5 34 In-Frame Inter-chr q13.32 q24.2 Seq+ 94332 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPF3-CTSS PRPF3 chr1 150321592 + CTSS chr1 150765794 - Exonic hg38 LUAD TCGA-86-8673-01A 10 10 5'UTR-5'UTR Intra-chr q21.2 q21.3 Seq+ 94333 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIP5K1A-C1orf56 PIP5K1A chr1 151227400 + C1orf56 chr1 151050438 + Exonic hg38 LUAD TCGA-86-8673-01A 4 10 In-Frame Intra-chr q21.3 q21.3 Seq+ 94334 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRMT11-NCOA7 TRMT11 chr6 126013101 + NCOA7 chr6 125922682 + Exonic hg38 LUAD TCGA-86-8673-01A 1 20 Out-of-frame Intra-chr q22.32 q22.31 Seq+ 94335 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATOH8-GNLY ATOH8 chr2 85754957 + GNLY chr2 85695320 + Exonic hg38 LUAD TCGA-86-8673-01A 4 7 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 94336 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD2-KIF9 SETD2 chr3 47163854 - KIF9 chr3 47248086 - Exonic hg38 LUAD TCGA-86-8673-01A 3 11 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Seq+ 94337 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-EFCAB6 SHANK2 chr11 70659828 - EFCAB6 chr22 43540357 - Exonic hg38 LUAD TCGA-86-8673-01A 3 5 In-Frame Inter-chr q13.4 q13.31 Seq+ 94338 ChimerSeq TCGA FAWG TCGA_RNA-Seq AUTS2-CFTR AUTS2 chr7 70698620 + CFTR chr7 117504253 + Exonic hg38 LUAD TCGA-86-8673-01A 1 4 Out-of-frame Intra-chr q11.22 q31.2 Tumor suppressor gene 94339 ChimerSeq TCGA FAWG TCGA_RNA-Seq B3GNT4-BCL7A B3GNT4 chr12 122207812 + BCL7A chr12 122043886 + Exonic hg38 LUAD TCGA-86-8673-01A 1 4 3'UTR-3'UTR Intra-chr q24.31 Seq+ 94340 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF587B-ZSCAN4 ZNF587B chr19 57819945 + ZSCAN4 chr19 57676041 + Exonic hg38 LUAD TCGA-86-8674-01A 1 4 5'UTR-5'UTR Intra-chr q13.43 Transcription factor q13.43 Transcription factor Seq+ 94341 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKN3-SFTA3 CDKN3 chr14 54401579 + SFTA3 chr14 36491291 - Exonic hg38 LUAD TCGA-86-A4D0-01A 22 80 CDS-3'UTR Intra-chr q22.2 q13.3 Seq+ 94342 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCMTD1-WDR97 PCMTD1 chr8 51898930 - WDR97 chr8 144115943 + Exonic hg38 LUAD TCGA-86-A4D0-01A 5 28 In-Frame Intra-chr q11.23 q24.3 94343 ChimerSeq TCGA FAWG TCGA_RNA-Seq LCN2-KMT5B LCN2 chr9 128152284 + KMT5B chr11 68167178 - Exonic hg38 LUAD TCGA-86-A4D0-01A 3 17 Out-of-frame Inter-chr q34.11 q13.2 94344 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAM2-MTMR2 ADAM2 chr8 39746472 - MTMR2 chr11 95866486 - Exonic hg38 LUAD TCGA-86-A4D0-01A 1 13 5'UTR-5'UTR Inter-chr q21 Seq+ 94345 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2K-FAM216B UBE2K chr4 39698390 + FAM216B chr13 42786763 + Exonic hg38 LUAD TCGA-86-A4P7-01A 16 31 In-Frame Inter-chr p14 q14.11 Seq+ 94346 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPC2-LTBP2 NPC2 chr14 74493193 - LTBP2 chr14 74504054 - Exonic hg38 LUAD TCGA-86-A4P7-01A 2 62 In-Frame Intra-chr q24.3 q24.3 Seq+ 94347 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-TTC17 FBXL20 chr17 39343180 - TTC17 chr11 43490239 + Exonic hg38 LUAD TCGA-86-A4P7-01A 4 28 Out-of-frame Inter-chr q12 p12 Seq+ 94348 ChimerSeq TCGA FAWG TCGA_RNA-Seq PI4KB-SYT11 PI4KB chr1 151327271 - SYT11 chr1 155880500 + Exonic hg38 LUAD TCGA-86-A4P7-01A 1 15 5'UTR-CDS Intra-chr q21.3 q22 Seq+ 94349 ChimerSeq TCGA FAWG TCGA_RNA-Seq EML4-ALK EML4 chr2 42325554 + ALK chr2 29223528 - Exonic hg38 LUAD TCGA-86-A4P8-01A 2 4 In-Frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 94350 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTR5-RPRD1B ACTR5 chr20 38767596 + RPRD1B chr20 38089726 + Exonic hg38 LUAD TCGA-91-6828-01A 1 11 In-Frame Intra-chr q11.23 q11.23 Seq+ 94351 ChimerSeq TCGA FAWG TCGA_RNA-Seq LACTB2-ITPR2 LACTB2 chr8 70638548 - ITPR2 chr12 26483898 - Exonic hg38 LUAD TCGA-91-6828-01A 1 3 Out-of-frame Inter-chr q13.3 p11.23 94352 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRBP1-TASP1 RRBP1 chr20 17633460 - TASP1 chr20 13417521 - Exonic hg38 LUAD TCGA-91-6831-01A 15 89 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 94353 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF4-TSHZ2 TAF4 chr20 61997550 - TSHZ2 chr20 53487144 + Exonic hg38 LUAD TCGA-91-6831-01A 15 75 5'UTR-3'UTR Intra-chr q13.2 Transcription factor Seq+ 94354 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNAI1-PFDN4 SNAI1 chr20 49984351 + PFDN4 chr20 54219019 + Exonic hg38 LUAD TCGA-91-6831-01A 16 47 Out-of-frame Intra-chr q13.13 Transcription factor q13.2 Seq+ 94355 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERO1B-HEATR1 ERO1B chr1 236225070 - HEATR1 chr1 236558529 - Exonic hg38 LUAD TCGA-91-6831-01A 2 12 In-Frame Intra-chr q42.3 q43 94356 ChimerSeq TCGA FAWG TCGA_RNA-Seq CIRBP-WDR18 CIRBP chr19 1269410 + WDR18 chr19 994020 + Exonic hg38 LUAD TCGA-91-6831-01A 2 8 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 94357 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL21-LRP5 MRPL21 chr11 68896515 - LRP5 chr11 68347847 + Exonic hg38 LUAD TCGA-91-6831-01A 2 4 Out-of-frame Intra-chr q13.3 q13.2 Seq+ 94358 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTN3-HRASLS5 RTN3 chr11 63681778 + HRASLS5 chr11 63466372 - Exonic hg38 LUAD TCGA-91-6831-01A 1 8 Out-of-frame Intra-chr q13.1 q12.3 Seq+ 94359 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPC4AP-ADNP TRPC4AP chr20 35092614 - ADNP chr20 50894512 - Exonic hg38 LUAD TCGA-91-6831-01A 2 3 In-Frame Intra-chr q11.22 q13.13 Transcription factor Seq+ 94360 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF20-ADNP PHF20 chr20 35801605 + ADNP chr20 50894512 - Exonic hg38 LUAD TCGA-91-6831-01A 1 6 Out-of-frame Intra-chr q11.22 Transcription factor q13.13 Transcription factor Seq+ 94361 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOC2B-APBB2 DOC2B chr17 156220 - APBB2 chr4 41100750 - Exonic hg38 LUAD TCGA-91-6831-01A 1 5 5'UTR-5'UTR Inter-chr p13 94362 ChimerSeq TCGA FAWG TCGA_RNA-Seq ULK2-UBBP4 ULK2 chr17 19810378 - UBBP4 chr17 22204087 + Exonic hg38 LUAD TCGA-91-6835-01A 7 12 CDS-5'UTR Intra-chr p11.2 Other:ULK p11.2 94363 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM177A1-KIAA0391 FAM177A1 chr14 35053451 + KIAA0391 chr14 35180670 + Exonic hg38 LUAD TCGA-91-6836-01A 3 108 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 94364 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSH2-NUFIP2 SSH2 chr17 29929938 - NUFIP2 chr17 29267530 - Exonic hg38 LUAD TCGA-91-6836-01A 17 46 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 94365 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLK2-ASH1L CLK2 chr1 155266729 - ASH1L chr1 155343742 - Exonic hg38 LUAD TCGA-91-6836-01A 5 20 5'UTR-CDS Intra-chr q22 CMGC:CLK q22 Transcription factor Seq+ 94366 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH1-VPS4A CDH1 chr16 68738411 + VPS4A chr16 69316008 + Exonic hg38 LUAD TCGA-91-6836-01A 5 13 Out-of-frame Intra-chr q22.1 Oncogene Tumor suppressor gene q22.1 Seq+ 94367 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID4A-KIAA0586 ARID4A chr14 58301690 + KIAA0586 chr14 58540071 + Exonic hg38 LUAD TCGA-91-6836-01A 2 17 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 94368 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC1-SKIDA1 DNAJC1 chr10 21920798 - SKIDA1 chr10 21523871 - Exonic hg38 LUAD TCGA-91-6836-01A 3 11 CDS-5'UTR Intra-chr p12.31 p12.31 Seq+ 94369 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRF5-MEP1A ADGRF5 chr6 46865042 - MEP1A chr6 46834578 + Exonic hg38 LUAD TCGA-91-6840-01A 59 185 In-Frame Intra-chr p12.3 p12.3 94370 ChimerSeq TCGA FAWG TCGA_RNA-Seq LARP4-MUCL1 LARP4 chr12 50401028 + MUCL1 chr12 54856770 + Exonic hg38 LUAD TCGA-91-6840-01A 22 305 Out-of-frame Intra-chr q13.12 q13.2 Seq+ 94371 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF8-CRISP1 TAF8 chr6 42068607 + CRISP1 chr6 49852129 - Exonic hg38 LUAD TCGA-91-6840-01A 20 59 In-Frame Intra-chr p21.1 p12.3 Seq+ 94372 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPTC7-ARPC3 PPTC7 chr12 110582809 - ARPC3 chr12 110440388 - Exonic hg38 LUAD TCGA-91-6840-01A 2 16 In-Frame Intra-chr q24.11 q24.11 Seq+ 94373 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1958-WDR34 KIAA1958 chr9 112487118 + WDR34 chr9 128640939 - Exonic hg38 LUAD TCGA-91-6840-01A 1 8 5'UTR-CDS Intra-chr q32 q34.11 Seq+ 94374 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGCR2-EHBP1 DGCR2 chr22 19064848 - EHBP1 chr2 62993530 + Exonic hg38 LUAD TCGA-91-6840-01A 1 6 Out-of-frame Inter-chr q11.21 p15 Seq+ 94375 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNMB4-ALDH3B2 KCNMB4 chr12 70367070 + ALDH3B2 chr11 67667635 - Exonic hg38 LUAD TCGA-91-6840-01A 1 4 CDS-5'UTR Inter-chr q15 q13.2 Seq+ 94376 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK1-BCAS3 TAOK1 chr17 29510992 + BCAS3 chr17 60808004 + Exonic hg38 LUAD TCGA-91-6847-01A 5 28 Out-of-frame Intra-chr q11.2 q23.2 Seq+ 94377 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX19A-ABCC11 DDX19A chr16 70350605 + ABCC11 chr16 48235177 - Exonic hg38 LUAD TCGA-91-6847-01A 5 5 5'UTR-5'UTR Intra-chr q22.1 q12.1 Seq+ 94378 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKAL1-C6orf89 CDKAL1 chr6 20548705 + C6orf89 chr6 36894504 + Exonic hg38 LUAD TCGA-91-6847-01A 2 14 CDS-5'UTR Intra-chr p22.3 p21.2 Seq+ 94379 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-GIT1 BCAS3 chr17 60868683 + GIT1 chr17 29578779 - Exonic hg38 LUAD TCGA-91-6847-01A 3 8 In-Frame Intra-chr q23.2 q11.2 Seq+ 94380 ChimerSeq TCGA FAWG TCGA_RNA-Seq B9D1-SPECC1 B9D1 chr17 19343790 - SPECC1 chr17 20057677 + Exonic hg38 LUAD TCGA-91-6847-01A 1 15 CDS-5'UTR Intra-chr p11.2 p11.2 94381 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHROOM3-SCARB2 SHROOM3 chr4 76770898 + SCARB2 chr4 76195864 - Exonic hg38 LUAD TCGA-91-6847-01A 1 1 In-Frame Intra-chr q21.1 q21.1 94382 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM9-MYO5B TMEM9 chr1 201143820 - MYO5B chr18 49895174 - Exonic hg38 LUAD TCGA-91-6848-01A 6 60 In-Frame Inter-chr q32.1 q21.1 Seq+ 94383 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTK2-ANKRD11 PTK2 chr8 141001125 - ANKRD11 chr16 89418368 - Exonic hg38 LUAD TCGA-91-6848-01A 2 14 5'UTR-5'UTR Inter-chr q24.3 q24.3 Seq+ 94384 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTK2-CACNG8 PTK2 chr8 141000880 - CACNG8 chr19 53978146 + Exonic hg38 LUAD TCGA-91-6848-01A 2 13 5'UTR-CDS Inter-chr q24.3 q13.42 Seq+ 94385 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCTD10-TPCN1 KCTD10 chr12 109469515 - TPCN1 chr12 113278772 + Exonic hg38 LUAD TCGA-91-6848-01A 1 9 Out-of-frame Intra-chr q24.11 q24.13 Seq+ 94386 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPHA5-RUFY3 EPHA5 chr4 65490377 - RUFY3 chr4 70762519 + Exonic hg38 LUAD TCGA-91-6848-01A 1 8 In-Frame Intra-chr q13.2 Oncogene q13.3 Seq+ 94387 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL6-SPHKAP OSBPL6 chr2 178194674 + SPHKAP chr2 228027543 - Exonic hg38 LUAD TCGA-91-6848-01A 1 4 5'UTR-CDS Intra-chr q31.2 q36.3 94388 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNG-NEMP1 UNG chr12 109099284 + NEMP1 chr12 57070893 - Exonic hg38 LUAD TCGA-91-6848-01A 1 4 In-Frame Intra-chr q24.11 q13.3 94389 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF37A-EBF3 ZNF37A chr10 38096632 + EBF3 chr10 129877849 - Exonic hg38 LUAD TCGA-91-6848-01A 1 3 Out-of-frame Intra-chr p11.1 Transcription factor q26.3 Tumor suppressor gene Transcription factor 94390 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARMC1-SPAG11B ARMC1 chr8 65613244 - SPAG11B chr8 7451199 - Exonic hg38 LUAD TCGA-91-7771-01A 4 25 CDS-3'UTR Intra-chr q13.1 p23.1 Seq+ 94391 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPSF6-OT CPSF6 chr12 69262562 + OT chr3 181088877 + Exonic hg38 LUAD TCGA-91-7771-01A 5 18 Out-of-frame Inter-chr q15 94392 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KC1-TFPI RPS6KC1 chr1 213077816 + TFPI chr2 187503770 - Exonic hg38 LUAD TCGA-91-7771-01A 5 6 5'UTR-5'UTR Inter-chr q32.3 q32.1 Seq+ 94393 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIFC3-CNGB1 KIFC3 chr16 57779361 - CNGB1 chr16 57888074 - Exonic hg38 LUAD TCGA-91-7771-01A 1 21 5'UTR-CDS Intra-chr q21 q21 Seq+ 94394 ChimerSeq TCGA FAWG TCGA_RNA-Seq MECOM-FRMD5 MECOM chr3 169092958 - FRMD5 chr15 43888266 - Exonic hg38 LUAD TCGA-91-7771-01A 3 8 Out-of-frame Inter-chr q26.2 Transcription factor q15.3 Seq+ 94395 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLN2-RBPMS2 TLN2 chr15 62390685 + RBPMS2 chr15 64751638 - Exonic hg38 LUAD TCGA-91-7771-01A 1 8 5'UTR-CDS Intra-chr q22.2 q22.31 94396 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP1LC3A-ASIP MAP1LC3A chr20 34546916 + ASIP chr20 34260365 + Exonic hg38 LUAD TCGA-91-7771-01A 2 2 5'UTR-5'UTR Intra-chr q11.22 q11.22 Seq+ 94397 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFE2-STARD7 NFE2 chr12 54300801 - STARD7 chr2 96187301 - Exonic hg38 LUAD TCGA-91-7771-01A 1 4 5'UTR-CDS Inter-chr q13.13 Transcription factor q11.2 Seq+ 94398 ChimerSeq TCGA FAWG TCGA_RNA-Seq BBS2-ADAT1 BBS2 chr16 56505950 - ADAT1 chr16 75603171 - Exonic hg38 LUAD TCGA-91-8496-01A 1 4 Out-of-frame Intra-chr q13 q23.1 Seq+ 94399 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFAT5-HHAT NFAT5 chr16 69566374 + HHAT chr1 210387468 + Exonic hg38 LUAD TCGA-91-8497-01A 3 26 CDS-3'UTR Inter-chr q22.1 Transcription factor Seq+ 94400 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF21A-ALKBH3 PHF21A chr11 46120935 - ALKBH3 chr11 43882583 + Exonic hg38 LUAD TCGA-91-8497-01A 1 6 5'UTR-5'UTR Intra-chr p11.2 Transcription factor p11.2 Seq+ 94401 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL13RA1-WDR44 IL13RA1 chrX 118741156 + WDR44 chrX 118387340 + Exonic hg38 LUAD TCGA-91-8499-01A 40 237 In-Frame Intra-chr q24 q24 Seq+ 94402 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM162A-CASR FAM162A chr3 122384299 + CASR chr3 122261528 + Exonic hg38 LUAD TCGA-91-8499-01A 9 22 Out-of-frame Intra-chr q21.1 q13.33 Seq+ 94403 ChimerSeq TCGA FAWG TCGA_RNA-Seq GK5-PAQR9 GK5 chr3 142198802 - PAQR9 chr3 142952850 - Exonic hg38 LUAD TCGA-91-8499-01A 2 6 3'UTR-3'UTR Intra-chr q23 q23 Seq+ 94404 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYTH1-LGALS3BP CYTH1 chr17 78692417 - LGALS3BP chr17 78972704 - Exonic hg38 LUAD TCGA-91-8499-01A 1 7 Out-of-frame Intra-chr q25.3 q25.3 94405 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBLL1-SLC26A4 CBLL1 chr7 107749047 + SLC26A4 chr7 107661639 + Exonic hg38 LUAD TCGA-91-8499-01A 1 6 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 94406 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF21A-AMBRA1 PHF21A chr11 46092183 - AMBRA1 chr11 46494204 - Exonic hg38 LUAD TCGA-91-8499-01A 1 3 5'UTR-CDS Intra-chr p11.2 Transcription factor p11.2 Seq+ 94407 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDGFRL-VPS37A PDGFRL chr8 17589765 + VPS37A chr8 17274733 + Exonic hg38 LUAD TCGA-91-A4BC-01A 4 35 In-Frame Intra-chr p22 Tumor suppressor gene p22 Seq+ 94408 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS72-ROBO2 VPS72 chr1 151184317 - ROBO2 chr3 77568313 + Exonic hg38 LUAD TCGA-91-A4BC-01A 8 15 In-Frame Inter-chr q21.3 p12.3 Seq+ 94409 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH1L-INSRR ASH1L chr1 155521100 - INSRR chr1 156854303 - Exonic hg38 LUAD TCGA-91-A4BC-01A 8 11 Out-of-frame Intra-chr q22 Transcription factor q23.1 Seq+ 94410 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK3-SPRR2E STK3 chr8 98749276 - SPRR2E chr1 153093770 - Exonic hg38 LUAD TCGA-91-A4BC-01A 4 10 CDS-5'UTR Inter-chr q22.2 q21.3 Seq+ 94411 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM65A-LRRC36 FAM65A chr16 67528914 + LRRC36 chr16 67341957 + Exonic hg38 LUAD TCGA-91-A4BC-01A 2 5 Out-of-frame Intra-chr q22.1 Seq+ 94412 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNK5-PDE4DIP KCNK5 chr6 39228926 - PDE4DIP chr1 148889784 + Exonic hg38 LUAD TCGA-91-A4BC-01A 1 6 In-Frame Inter-chr p21.2 q21.2 Oncogene Seq+ 94413 ChimerSeq TCGA FAWG TCGA_RNA-Seq MUC1-PKLR MUC1 chr1 155192183 - PKLR chr1 155293590 - Exonic hg38 LUAD TCGA-91-A4BD-01A 2 3 CDS-5'UTR Intra-chr q22 Oncogene q22 Seq+ 94414 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLINT1-MARCH11 CLINT1 chr5 157858930 - 2019_ 3_ 11_ chr5 16067793 - Exonic hg38 LUAD TCGA-93-7348-01A 18 138 Out-of-frame Intra-chr q33.3 p15.1 Seq+ 94415 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNB1-IGSF8 CACNB1 chr17 39183713 - IGSF8 chr1 160095246 - Exonic hg38 LUAD TCGA-93-7348-01A 2 3 Out-of-frame Inter-chr q12 q23.2 Seq+ 94416 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC43A1-COG7 SLC43A1 chr11 57513958 - COG7 chr16 23393347 - Exonic hg38 LUAD TCGA-93-7348-01A 2 1 Out-of-frame Inter-chr q12.1 p12.2 Seq+ 94417 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARPC1B-MYH16 ARPC1B chr7 99394119 + MYH16 chr7 99303065 + Exonic hg38 LUAD TCGA-93-8067-01A 32 101 CDS-3'UTR Intra-chr q22.1 q22.1 94418 ChimerSeq TCGA FAWG TCGA_RNA-Seq FYTTD1-DNAJC7 FYTTD1 chr3 197778464 + DNAJC7 chr17 41994944 - Exonic hg38 LUAD TCGA-93-8067-01A 20 84 In-Frame Inter-chr q29 q21.2 Seq+ 94419 ChimerSeq TCGA FAWG TCGA_RNA-Seq SWAP70-PYY2 SWAP70 chr11 9694286 + PYY2 chr17 28227306 + Exonic hg38 LUAD TCGA-93-8067-01A 9 69 CDS-5'UTR Inter-chr p15.4 q11.2 Seq+ 94420 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOT1-LRRC37B RHOT1 chr17 32142729 + LRRC37B chr17 32047761 + Exonic hg38 LUAD TCGA-93-8067-01A 4 40 In-Frame Intra-chr q11.2 q11.2 Seq+ 94421 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF143-TMEM41B ZNF143 chr11 9461076 + TMEM41B chr11 9287806 - Exonic hg38 LUAD TCGA-93-8067-01A 12 4 5'UTR-CDS Intra-chr p15.4 Transcription factor p15.4 Seq+ 94422 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF20-MKL1 TCF20 chr22 42209651 - MKL1 chr22 40435554 - Exonic hg38 LUAD TCGA-93-8067-01A 6 24 Out-of-frame Intra-chr Transcription factor q13.2 Seq+ 94423 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMYM4-SSBP4 ZMYM4 chr1 35390098 + SSBP4 chr19 18427351 + Exonic hg38 LUAD TCGA-93-8067-01A 5 20 Out-of-frame Inter-chr p34.3 p13.11 Seq+ 94424 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAI1-MRGPRF RAI1 chr17 17681793 + MRGPRF chr11 69006261 - Exonic hg38 LUAD TCGA-93-8067-01A 6 6 5'UTR-CDS Inter-chr p11.2 q13.3 Seq+ 94425 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC7A6-NFATC3 SLC7A6 chr16 68275249 + NFATC3 chr16 68214329 + Exonic hg38 LUAD TCGA-93-8067-01A 1 20 In-Frame Intra-chr q22.1 q22.1 Transcription factor Seq+ 94426 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDF2-ARHGAP44 SDF2 chr17 28662046 - ARHGAP44 chr17 12928929 + Exonic hg38 LUAD TCGA-93-8067-01A 1 18 3'UTR-CDS Intra-chr q11.2 p12 94427 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPX8-TTLL1 GPX8 chr5 55160243 + TTLL1 chr22 43059527 - Exonic hg38 LUAD TCGA-93-8067-01A 2 5 In-Frame Inter-chr q11.2 q13.2 Seq+ 94428 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF5B-MET KIF5B chr10 32017143 - MET chr7 116771849 + Exonic hg38 LUAD TCGA-93-A4JN-01A 6 43 In-Frame Inter-chr p11.22 q31.2 TK:Met Oncogene KB Pub Seq+ 94429 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC20-MIPEP ZDHHC20 chr13 21413652 - MIPEP chr13 23756618 - Exonic hg38 LUAD TCGA-93-A4JO-01A 72 291 Out-of-frame Intra-chr q12.11 q12.12 Seq+ 94430 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD8-DPF2 FRMD8 chr11 65394099 + DPF2 chr11 65351683 + Exonic hg38 LUAD TCGA-93-A4JO-01A 4 51 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 94431 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD2AP-DVL1 CD2AP chr6 47478248 + DVL1 chr1 1342758 - Exonic hg38 LUAD TCGA-93-A4JO-01A 2 8 Out-of-frame Inter-chr p12.3 p36.33 Seq+ 94432 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN2-MYL12B PTPN2 chr18 12884073 - MYL12B chr18 3277253 + Exonic hg38 LUAD TCGA-93-A4JP-01A 139 1003 Out-of-frame Intra-chr p11.21 Tumor suppressor gene p11.31 Seq+ 94433 ChimerSeq TCGA FAWG TCGA_RNA-Seq STIM1-NUP98 STIM1 chr11 3856409 + NUP98 chr11 3735324 - Exonic hg38 LUAD TCGA-93-A4JP-01A 2 14 In-Frame Intra-chr p15.4 p15.4 Oncogene Tumor suppressor gene Seq+ 94434 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRMT2-STX18 PRMT2 chr21 46648619 + STX18 chr4 4471706 - Exonic hg38 LUAD TCGA-93-A4JP-01A 3 7 In-Frame Inter-chr q22.3 p16.2 Seq+ 94435 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSI2-U95743.1 MSI2 chr17 57529724 + U95743.1 chr16 13730436 - Exonic hg38 LUAD TCGA-93-A4JP-01A 1 10 Out-of-frame Inter-chr q22 p13.12 94436 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLAA-HACD4 PLAA chr9 26946897 - HACD4 chr9 21029398 - Exonic hg38 LUAD TCGA-93-A4JQ-01A 10 87 In-Frame Intra-chr p21.2 p21.3 Tumor suppressor gene 94437 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13L-COL23A1 MED13L chr12 116277060 - COL23A1 chr5 178263324 - Exonic hg38 LUAD TCGA-93-A4JQ-01A 9 55 In-Frame Inter-chr q24.21 q35.3 Seq+ 94438 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAD2-LRP12 ATAD2 chr8 123396187 - LRP12 chr8 104509074 - Exonic hg38 LUAD TCGA-93-A4JQ-01A 8 12 Out-of-frame Intra-chr q24.13 q22.3 Seq+ 94439 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFS4-UBE2D2 NDUFS4 chr5 53560760 + UBE2D2 chr5 139600372 + Exonic hg38 LUAD TCGA-93-A4JQ-01A 1 18 Out-of-frame Intra-chr q11.2 q31.2 Seq+ 94440 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEC-NCAM2 TEC chr4 48269752 - NCAM2 chr21 21373863 + Exonic hg38 LUAD TCGA-93-A4JQ-01A 2 8 5'UTR-CDS Inter-chr p11 TK:Tec Tumor suppressor gene q21.1 Tumor suppressor gene Seq+ 94441 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASP7-EDRF1 CASP7 chr10 113697603 + EDRF1 chr10 125737918 + Exonic hg38 LUAD TCGA-93-A4JQ-01A 1 11 Out-of-frame Intra-chr q25.3 q26.2 94442 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2AK4-AVEN EIF2AK4 chr15 40002788 + AVEN chr15 33867855 - Exonic hg38 LUAD TCGA-93-A4JQ-01A 1 2 Out-of-frame Intra-chr q15.1 q14 Seq+ 94443 ChimerSeq TCGA FAWG TCGA_RNA-Seq MST1R-FNDC3B MST1R chr3 49895167 - FNDC3B chr3 172186712 + Exonic hg38 LUAD TCGA-95-7039-01A 9 72 Out-of-frame Intra-chr p21.31 Tumor suppressor gene q26.31 Seq+ 94444 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC90B-CLPB CCDC90B chr11 83285873 - CLPB chr11 72302348 - Exonic hg38 LUAD TCGA-95-7039-01A 1 22 Out-of-frame Intra-chr q14.1 q13.4 Seq+ 94445 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN1-CGA ATXN1 chr6 16657776 - CGA chr6 87088207 - Exonic hg38 LUAD TCGA-95-7039-01A 3 6 5'UTR-5'UTR Intra-chr p22.3 q14.3 Seq+ 94446 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNDC3B-ATP13A4 FNDC3B chr3 172133546 + ATP13A4 chr3 193514871 - Exonic hg38 LUAD TCGA-95-7039-01A 1 9 Out-of-frame Intra-chr q26.31 q29 94447 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA3F-SLC9A9 SEMA3F chr3 50155147 + SLC9A9 chr3 143467190 - Exonic hg38 LUAD TCGA-95-7039-01A 2 4 5'UTR-CDS Intra-chr p21.31 Tumor suppressor gene q24 Seq+ 94448 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3GL1-MLLT1 SH3GL1 chr19 4400324 - MLLT1 chr19 6270759 - Exonic hg38 LUAD TCGA-95-7039-01A 1 2 In-Frame Intra-chr p13.3 p13.3 94449 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPBL-ATP2A2 NIPBL chr5 36877178 + ATP2A2 chr12 110282604 + Exonic hg38 LUAD TCGA-95-7043-01A 8 8 5'UTR-CDS Inter-chr p13.2 q24.11 Seq+ 94450 ChimerSeq TCGA FAWG TCGA_RNA-Seq THRA-PSMD3 THRA chr17 40089333 + PSMD3 chr17 39984294 + Exonic hg38 LUAD TCGA-95-7043-01A 2 5 Out-of-frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Seq+ 94451 ChimerSeq TCGA FAWG TCGA_RNA-Seq AVEN-GOLGA8B AVEN chr15 34003032 - GOLGA8B chr15 34553956 - Exonic hg38 LUAD TCGA-95-7043-01A 1 3 CDS-3'UTR Intra-chr q14 q14 94452 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2D2-SND1 UBE2D2 chr5 139561815 + SND1 chr7 128074502 + Exonic hg38 LUAD TCGA-95-7562-01A 11 76 In-Frame Inter-chr q31.2 q32.1 Seq+ 94453 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPH3-ATAD1 HNRNPH3 chr10 68332216 + ATAD1 chr10 87814612 - Exonic hg38 LUAD TCGA-95-7562-01A 9 30 5'UTR-5'UTR Intra-chr q21.3 Seq+ 94454 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP11A-MCF2L ATP11A chr13 112690455 + MCF2L chr13 113014763 + Exonic hg38 LUAD TCGA-95-7567-01A 3 4 Out-of-frame Intra-chr q34 q34 Seq+ 94455 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2E2-ACE GTF2E2 chr8 30653433 - ACE chr17 63484330 + Exonic hg38 LUAD TCGA-95-7948-01A 5 10 Out-of-frame Inter-chr p12 q23.3 Seq+ 94456 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLB-UVRAG POLB chr8 42345019 + UVRAG chr11 76008807 + Exonic hg38 LUAD TCGA-95-8039-01A 7 29 In-Frame Inter-chr p11.21 q13.5 Tumor suppressor gene Seq+ 94457 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS4-RSF1 INTS4 chr11 77994590 - RSF1 chr11 77678153 - Exonic hg38 LUAD TCGA-95-8494-01A 3 27 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 94458 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM222B-GYS2 FAM222B chr17 28842682 - GYS2 chr12 21569009 - Exonic hg38 LUAD TCGA-95-8494-01A 2 13 5'UTR-CDS Inter-chr q11.2 p12.1 Seq+ 94459 ChimerSeq TCGA FAWG TCGA_RNA-Seq UHRF1-KDM4B UHRF1 chr19 4932956 + KDM4B chr19 5071010 + Exonic hg38 LUAD TCGA-95-8494-01A 2 7 In-Frame Intra-chr p13.3 p13.3 Seq+ 94460 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPYD-TGFBR3 DPYD chr1 97679095 - TGFBR3 chr1 91683857 - Exonic hg38 LUAD TCGA-95-8494-01A 1 6 In-Frame Intra-chr p21.3 Oncogene p22.1 Tumor suppressor gene 94461 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC12A7-RASGEF1C SLC12A7 chr5 1111868 - RASGEF1C chr5 180138058 - Exonic hg38 LUAD TCGA-95-A4VK-01A 21 48 5'UTR-5'UTR Intra-chr p15.33 q35.3 Seq+ 94462 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF354A-SLC12A7 ZNF354A chr5 178725376 - SLC12A7 chr5 1089128 - Exonic hg38 LUAD TCGA-95-A4VK-01A 3 21 CDS-5'UTR Intra-chr q35.3 Transcription factor p15.33 Seq+ 94463 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPOCK1-ARHGAP26 SPOCK1 chr5 137498373 - ARHGAP26 chr5 143120988 + Exonic hg38 LUAD TCGA-95-A4VK-01A 5 5 Out-of-frame Intra-chr q31.2 q31.3 Seq+ 94464 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D9B-TENM2 TBC1D9B chr5 179907704 - TENM2 chr5 167875986 + Exonic hg38 LUAD TCGA-95-A4VK-01A 2 15 5'UTR-CDS Intra-chr q34 Seq+ 94465 ChimerSeq TCGA FAWG TCGA_RNA-Seq SQSTM1-GRIA1 SQSTM1 chr5 179806591 + GRIA1 chr5 153698044 + Exonic hg38 LUAD TCGA-95-A4VK-01A 1 18 3'UTR-CDS Intra-chr q35.3 q33.2 Seq+ 94466 ChimerSeq TCGA FAWG TCGA_RNA-Seq ULK2-ACADVL ULK2 chr17 19838501 - ACADVL chr17 7220122 + Exonic hg38 LUAD TCGA-95-A4VK-01A 4 1 Out-of-frame Intra-chr p11.2 Other:ULK p13.1 Seq+ 94467 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIP12-SLC16A14 TRIP12 chr2 229858772 - SLC16A14 chr2 230037531 - Exonic hg38 LUAD TCGA-95-A4VP-01A 5 16 In-Frame Intra-chr q36.3 q36.3 Seq+ 94468 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARFGEF2-PTP4A1 ARFGEF2 chr20 48988388 + PTP4A1 chr6 63576436 + Exonic hg38 LUAD TCGA-95-A4VP-01A 1 2 CDS-5'UTR Inter-chr q13.13 q12 94469 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYCBP2-SLC52A3 MYCBP2 chr13 77188951 - SLC52A3 chr20 768482 - Exonic hg38 LUAD TCGA-97-7546-01A 1 2 CDS-5'UTR Inter-chr q22.3 p13 94470 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLA2G10-CLEC16A PLA2G10 chr16 14694133 - CLEC16A chr16 11020193 + Exonic hg38 LUAD TCGA-97-7547-01A 3 44 5'UTR-CDS Intra-chr p13.13 Seq+ 94471 ChimerSeq TCGA FAWG TCGA_RNA-Seq BPIFB1-BPIFB4 BPIFB1 chr20 33291988 + BPIFB4 chr20 33111414 + Exonic hg38 LUAD TCGA-97-7547-01A 1 22 In-Frame Intra-chr q11.21 q11.21 94472 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK1-CABYR ROCK1 chr18 21110818 - CABYR chr18 24155701 + Exonic hg38 LUAD TCGA-97-7552-01A 12 28 Out-of-frame Intra-chr q11.1 AGC:DMPK q11.2 Seq+ 94473 ChimerSeq TCGA FAWG TCGA_RNA-Seq BICC1-DPYSL4 BICC1 chr10 58702143 + DPYSL4 chr10 132200356 + Exonic hg38 LUAD TCGA-97-7553-01A 3 10 In-Frame Intra-chr q21.1 q26.3 Seq+ 94474 ChimerSeq TCGA FAWG TCGA_RNA-Seq APBA2-C12orf60 APBA2 chr15 28886278 + C12orf60 chr12 14822912 + Exonic hg38 LUAD TCGA-97-7554-01A 13 29 3'UTR-5'UTR Inter-chr p12.3 94475 ChimerSeq TCGA FAWG TCGA_RNA-Seq NME2-CCL4L2 NME2 chr17 51168343 + CCL4L2 chr17 36211776 + Exonic hg38 LUAD TCGA-97-7554-01A 10 40 CDS-3'UTR Intra-chr q21.33 Transcription factor q12 Seq+ 94476 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS8-GYS2 EPS8 chr12 15789161 - GYS2 chr12 21580523 - Exonic hg38 LUAD TCGA-97-7554-01A 2 15 5'UTR-CDS Intra-chr p12.3 p12.1 Seq+ 94477 ChimerSeq TCGA FAWG TCGA_RNA-Seq VTI1A-C10orf90 VTI1A chr10 112538330 + C10orf90 chr10 126513939 - Exonic hg38 LUAD TCGA-97-7554-01A 2 13 In-Frame Intra-chr q25.2 q26.2 Seq+ 94478 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOSR2-UTP6 GOSR2 chr17 46923221 + UTP6 chr17 31880754 - Exonic hg38 LUAD TCGA-97-7554-01A 1 9 In-Frame Intra-chr q21.32 q11.2 94479 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAPSA-COL1A1 NAPSA chr19 50361969 - COL1A1 chr17 50192693 - Exonic hg38 LUAD TCGA-97-7554-01A 1 6 Out-of-frame Inter-chr q13.33 q21.33 Oncogene 94480 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHNAK-STIP1 AHNAK chr11 62546660 - STIP1 chr11 64193078 + Exonic hg38 LUAD TCGA-97-7937-01A 12 55 5'UTR-CDS Intra-chr q12.3 Tumor suppressor gene q13.1 Seq+ 94481 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF10-FBXO21 RNF10 chr12 120534968 + FBXO21 chr12 117177641 - Exonic hg38 LUAD TCGA-97-7937-01A 9 46 Out-of-frame Intra-chr q24.31 q24.22 Seq+ 94482 ChimerSeq TCGA FAWG TCGA_RNA-Seq PER3-DNAJC11 PER3 chr1 7801191 + DNAJC11 chr1 6636246 - Exonic hg38 LUAD TCGA-97-7937-01A 7 35 Out-of-frame Intra-chr p36.23 p36.31 Tumor suppressor gene Seq+ 94483 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAD2-C10orf90 SMAD2 chr18 47868323 - C10orf90 chr10 126513939 - Exonic hg38 LUAD TCGA-97-7937-01A 1 41 In-Frame Inter-chr q21.1 Oncogene Tumor suppressor gene q26.2 Seq+ 94484 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIN52-SYNE2 LIN52 chr14 74095985 + SYNE2 chr14 64208758 + Exonic hg38 LUAD TCGA-97-7937-01A 3 28 In-Frame Intra-chr q24.3 q23.2 Seq+ 94485 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMB6-ENO3 PSMB6 chr17 4796296 + ENO3 chr17 4951828 + Exonic hg38 LUAD TCGA-97-8171-01A 14 42 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 94486 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13B-SGCZ VPS13B chr8 99193057 + SGCZ chr8 14324204 - Exonic hg38 LUAD TCGA-97-8171-01A 3 3 Out-of-frame Intra-chr q22.2 p22 Seq+ 94487 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGC-SFTPB PGC chr6 41736964 - SFTPB chr2 85666706 - Exonic hg38 LUAD TCGA-97-8174-01A 4 257 Out-of-frame Inter-chr p21.1 p11.2 Seq+ 94488 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC22A25-PACS1 SLC22A25 chr11 63228461 - PACS1 chr11 66230548 + Exonic hg38 LUAD TCGA-97-8174-01A 33 53 Out-of-frame Intra-chr q12.3 q13.1 Seq+ 94489 ChimerSeq TCGA FAWG TCGA_RNA-Seq ECHDC1-FYN ECHDC1 chr6 127314816 - FYN chr6 111708020 - Exonic hg38 LUAD TCGA-97-8174-01A 20 57 In-Frame Intra-chr q22.33 q21 TK:Src Seq+ 94490 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2A-FYN KMT2A chr11 118512025 + FYN chr6 111704102 - Exonic hg38 LUAD TCGA-97-8174-01A 10 20 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor q21 TK:Src 94491 ChimerSeq TCGA FAWG TCGA_RNA-Seq SESN1-ECHDC1 SESN1 chr6 109093795 - ECHDC1 chr6 127290277 - Exonic hg38 LUAD TCGA-97-8174-01A 8 10 Out-of-frame Intra-chr q21 q22.33 Seq+ 94492 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFF3-NPAS2 AFF3 chr2 100006632 - NPAS2 chr2 100988079 + Exonic hg38 LUAD TCGA-97-8174-01A 2 9 In-Frame Intra-chr q11.2 Oncogene q11.2 Tumor suppressor gene Transcription factor Seq+ 94493 ChimerSeq TCGA FAWG TCGA_RNA-Seq C11orf80-FADS1 C11orf80 chr11 66828364 + FADS1 chr11 61804761 - Exonic hg38 LUAD TCGA-97-8174-01A 1 2 Out-of-frame Intra-chr q13.2 q12.2 94494 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD4-PGC CD4 chr12 6816147 + PGC chr6 41747384 - Exonic hg38 LUAD TCGA-97-8174-01A 1000 1000 Out-of-frame Inter-chr p13.31 Tumor suppressor gene p21.1 94495 ChimerSeq TCGA FAWG TCGA_RNA-Seq SREBF2-PLPP4 SREBF2 chr22 41833358 + PLPP4 chr10 120575131 + Exonic hg38 LUAD TCGA-97-8175-01A 46 184 In-Frame Inter-chr q13.2 Transcription factor q26.12 Seq+ 94496 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMC3IP-SPECC1 PSMC3IP chr17 42573311 - SPECC1 chr17 20204333 + Exonic hg38 LUAD TCGA-97-8175-01A 1 3 Out-of-frame Intra-chr q21.2 p11.2 94497 ChimerSeq TCGA FAWG TCGA_RNA-Seq LCN2-LRSAM1 LCN2 chr9 128149663 + LRSAM1 chr9 127461173 + Exonic hg38 LUAD TCGA-97-8176-01A 1 5 In-Frame Intra-chr q34.11 q33.3 94498 ChimerSeq TCGA FAWG TCGA_RNA-Seq E2F5-CA3 E2F5 chr8 85209409 + CA3 chr8 85439712 + Exonic hg38 LUAD TCGA-97-8176-01A 1 2 In-Frame Intra-chr q21.2 Transcription factor q21.2 Seq+ 94499 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1B-TMEM242 ARID1B chr6 157036876 + TMEM242 chr6 157292999 - Exonic hg38 LUAD TCGA-97-8177-01A 3 24 5'UTR-CDS Intra-chr q25.3 Oncogene q25.3 94500 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOX3-HEYL TOX3 chr16 52463934 - HEYL chr1 39632715 - Exonic hg38 LUAD TCGA-97-8177-01A 4 10 Out-of-frame Inter-chr q12.1 p34.2 Transcription factor Seq+ 94501 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCZ-TP53TG5 PRKCZ chr1 2059591 + TP53TG5 chr20 45377613 - Exonic hg38 LUAD TCGA-97-8177-01A 1 2 Out-of-frame Inter-chr p36.33 q13.12 94502 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2C-SYTL5 KMT2C chr7 152435626 - SYTL5 chrX 38054213 + Exonic hg38 LUAD TCGA-97-8179-01A 1 16 In-Frame Inter-chr q36.1 Oncogene Tumor suppressor gene p11.4 94503 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP5-OR4G4P LRP5 chr11 68414012 + OR4G4P chr1 53282 + Exonic hg38 LUAD TCGA-97-8179-01A 4 3 Out-of-frame Inter-chr q13.2 94504 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC1-IDO1 EXOC1 chr4 55902538 + IDO1 chr8 39922552 + Exonic hg38 LUAD TCGA-97-8179-01A 1 10 Out-of-frame Inter-chr q12 p11.21 Seq+ 94505 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUDCD1-MROH1 NUDCD1 chr8 109271005 - MROH1 chr8 144248877 + Exonic hg38 LUAD TCGA-97-8547-01A 9 8 In-Frame Intra-chr q23.1 q24.3 94506 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM161B-FAM81B TMEM161B chr5 88228445 - FAM81B chr5 95413947 + Exonic hg38 LUAD TCGA-97-8547-01A 3 22 In-Frame Intra-chr q14.3 q15 Seq+ 94507 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX29-NLRP1 SNX29 chr16 12403529 + NLRP1 chr17 5584500 - Exonic hg38 LUAD TCGA-97-8552-01A 3 18 CDS-5'UTR Inter-chr p13.13 p13.2 Oncogene Seq+ 94508 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF343-PRPSAP2 ZNF343 chr20 2508881 - PRPSAP2 chr17 18923914 + Exonic hg38 LUAD TCGA-97-A4LX-01A 10 7 5'UTR-CDS Inter-chr p13 Transcription factor p11.2 Seq+ 94509 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK1-MAP2K4 TAOK1 chr17 29491865 + MAP2K4 chr17 12139839 + Exonic hg38 LUAD TCGA-97-A4LX-01A 2 12 Out-of-frame Intra-chr q11.2 p12 STE:STE7 Oncogene Tumor suppressor gene Seq+ 94510 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBX4-RFK CBX4 chr17 79837837 - RFK chr9 76388656 - Exonic hg38 LUAD TCGA-97-A4M1-01A 3 39 Out-of-frame Inter-chr q25.3 q21.13 Seq+ 94511 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHLPP2-KIF22 PHLPP2 chr16 71676447 - KIF22 chr16 29796893 + Exonic hg38 LUAD TCGA-97-A4M1-01A 1 9 In-Frame Intra-chr q22.2 Tumor suppressor gene p11.2 Seq+ 94512 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDZD2-COL27A1 PDZD2 chr5 32093024 + COL27A1 chr9 114252593 + Exonic hg38 LUAD TCGA-97-A4M1-01A 1 8 In-Frame Inter-chr p13.3 q32 Seq+ 94513 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGPAT3-PFKL AGPAT3 chr21 43865345 + PFKL chr21 44306681 + Exonic hg38 LUAD TCGA-97-A4M1-01A 2 1 5'UTR-CDS Intra-chr q22.3 q22.3 94514 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKAG2-ADCK2 PRKAG2 chr7 151876507 - ADCK2 chr7 140674611 + Exonic hg38 LUAD TCGA-97-A4M1-01A 1 4 In-Frame Intra-chr q36.1 q34 Atypical:ABC1 Seq+ 94515 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF786-LANCL2 ZNF786 chr7 149090623 - LANCL2 chr7 55398423 + Exonic hg38 LUAD TCGA-97-A4M1-01A 1 3 Out-of-frame Intra-chr q36.1 Transcription factor p11.2 Seq+ 94516 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCSTN-SPRR2G NCSTN chr1 160354290 + SPRR2G chr1 153150131 - Exonic hg38 LUAD TCGA-97-A4M3-01A 427 1201 CDS-5'UTR Intra-chr q23.2 q21.3 Seq+ 94517 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPP3-FKBP2 DPP3 chr11 66504774 + FKBP2 chr11 64243841 + Exonic hg38 LUAD TCGA-97-A4M3-01A 17 186 In-Frame Intra-chr q13.2 q13.1 Seq+ 94518 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHKA-HNF1B CHKA chr11 68074717 - HNF1B chr17 37687392 - Exonic hg38 LUAD TCGA-97-A4M3-01A 20 85 5'UTR-5'UTR Inter-chr q13.2 q12 Transcription factor Seq+ 94519 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAT3-DPP3 FAT3 chr11 92355404 + DPP3 chr11 66509079 + Exonic hg38 LUAD TCGA-97-A4M3-01A 9 48 In-Frame Intra-chr q13.2 Seq+ 94520 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53BP1-STAU2 TP53BP1 chr15 43428016 - STAU2 chr8 73527804 - Exonic hg38 LUAD TCGA-97-A4M3-01A 6 54 In-Frame Inter-chr q15.3 Tumor suppressor gene q21.11 Seq+ 94521 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAT3-CDH26 FAT3 chr11 92887113 + CDH26 chr20 60006713 + Exonic hg38 LUAD TCGA-97-A4M3-01A 3 23 Out-of-frame Inter-chr q13.33 Seq+ 94522 ChimerSeq TCGA FAWG TCGA_RNA-Seq LHCGR-GTF2A1L LHCGR chr2 48694224 - GTF2A1L chr2 48679335 + Exonic hg38 LUAD TCGA-97-A4M3-01A 2 16 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 94523 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP5-CHD6 LRP5 chr11 68363943 + CHD6 chr20 41457428 - Exonic hg38 LUAD TCGA-97-A4M3-01A 2 12 Out-of-frame Inter-chr q13.2 q12 Seq+ 94524 ChimerSeq TCGA FAWG TCGA_RNA-Seq RMDN2-DRG1 RMDN2 chr2 37929729 + DRG1 chr22 31426615 + Exonic hg38 LUAD TCGA-97-A4M3-01A 1 15 In-Frame Inter-chr p22.2 q12.2 Tumor suppressor gene 94525 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNT7B-DGCR8 WNT7B chr22 45949924 - DGCR8 chr22 20106177 + Exonic hg38 LUAD TCGA-97-A4M3-01A 3 4 Out-of-frame Intra-chr q13.31 q11.21 Seq+ 94526 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBCD-RPTOR TBCD chr17 82797802 + RPTOR chr17 80957624 + Exonic hg38 LUAD TCGA-97-A4M3-01A 3 3 5'UTR-CDS Intra-chr q25.3 Seq+ 94527 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAU2-PDE7A STAU2 chr8 73552012 - PDE7A chr8 65782843 - Exonic hg38 LUAD TCGA-97-A4M3-01A 2 4 In-Frame Intra-chr q21.11 q13.1 Seq+ 94528 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATAD2B-ASH1L GATAD2B chr1 153922733 - ASH1L chr1 155380116 - Exonic hg38 LUAD TCGA-97-A4M3-01A 1 6 5'UTR-CDS Intra-chr Transcription factor q22 Transcription factor Seq+ 94529 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMX1A-LELP1 LMX1A chr1 165353076 - LELP1 chr1 153204687 + Exonic hg38 LUAD TCGA-97-A4M3-01A 1 4 CDS-5'UTR Intra-chr q23.3 Transcription factor q21.3 Seq+ 94530 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNQ1-AMPD3 KCNQ1 chr11 2662081 + AMPD3 chr11 10357275 + Exonic hg38 LUAD TCGA-97-A4M5-01A 3 18 3'UTR-5'UTR Intra-chr p15.5 p15.4 94531 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP58-CCDC169 NUP58 chr13 25337034 + CCDC169 chr13 36283702 - Exonic hg38 LUAD TCGA-97-A4M6-01A 1 8 In-Frame Intra-chr q12.13 q13.3 94532 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPG-SNRNP25 MPG chr16 83256 + SNRNP25 chr16 57086 + Exonic hg38 LUAD TCGA-97-A4M7-01A 32 116 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 94533 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMBS-FOXR1 HMBS chr11 119085066 + FOXR1 chr11 118978782 + Exonic hg38 LUAD TCGA-99-7458-01A 8 39 CDS-3'UTR Intra-chr Transcription factor Seq+ 94534 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3BGRL2-ADGRB3 SH3BGRL2 chr6 79631506 + ADGRB3 chr6 68956024 + Exonic hg38 LUAD TCGA-99-7458-01A 1 2 Out-of-frame Intra-chr q14.1 q12 Oncogene 94535 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFTPB-USP39 SFTPB chr2 85663346 - USP39 chr2 85640976 + Exonic hg38 LUAD TCGA-99-8025-01A 12 39 In-Frame Intra-chr p11.2 p11.2 Seq+ 94536 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM2A-PACS1 KDM2A chr11 67121358 + PACS1 chr11 66193486 + Exonic hg38 LUAD TCGA-99-8025-01A 6 16 Out-of-frame Intra-chr q13.2 Transcription factor q13.1 Seq+ 94537 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEC-HAX1 PLEC chr8 143937165 - HAX1 chr1 154274950 + Exonic hg38 LUAD TCGA-99-8025-01A 1 5 In-Frame Inter-chr q24.3 q21.3 94538 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLS1-TEX264 PLS1 chr3 142596509 + TEX264 chr3 51703724 + Exonic hg38 LUAD TCGA-99-8032-01A 2 14 5'UTR-5'UTR Intra-chr q23 p21.2 Seq+ 94539 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBRM1-IGSF11 PBRM1 chr3 52678500 - IGSF11 chr3 118928716 - Exonic hg38 LUAD TCGA-99-8032-01A 2 9 Out-of-frame Intra-chr p21.1 Oncogene Tumor suppressor gene q13.32 Seq+ 94540 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM39A-BBX TMEM39A chr3 119461962 - BBX chr3 107732956 + Exonic hg38 LUAD TCGA-99-8032-01A 2 5 Out-of-frame Intra-chr q13.33 q13.12 Transcription factor Seq+ 94541 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACAP3-TMEM240 ACAP3 chr1 1292419 - TMEM240 chr1 1539787 - Exonic hg38 LUAD TCGA-99-8033-01A 9 34 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 94542 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC6B-STK11 TNRC6B chr22 40301333 + STK11 chr19 1222985 + Exonic hg38 LUAD TCGA-99-8033-01A 4 14 Out-of-frame Inter-chr q13.1 p13.3 Oncogene Tumor suppressor gene Seq+ 94543 ChimerSeq TCGA FAWG TCGA_RNA-Seq MVK-SEC1P MVK chr12 109574900 + SEC1P chr19 48680025 + Exonic hg38 LUAD TCGA-99-8033-01A 3 16 CDS-5'UTR Inter-chr q24.11 q13.33 Seq+ 94544 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPI-DLGAP2 GPI chr19 34368702 + DLGAP2 chr8 907912 + Exonic hg38 LUAD TCGA-99-AA5R-01A 3 33 3'UTR-3'UTR Inter-chr p23.3 94545 ChimerSeq TCGA FAWG TCGA_RNA-Seq SREBF2-EFCAB6 SREBF2 chr22 41880992 + EFCAB6 chr22 43555096 - Exonic hg38 LUAD TCGA-99-AA5R-01A 2 7 Out-of-frame Intra-chr q13.2 Transcription factor q13.31 Seq+ 94546 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL14A1-SREBF2 COL14A1 chr8 120228769 + SREBF2 chr22 41875337 + Exonic hg38 LUAD TCGA-99-AA5R-01A 2 6 Out-of-frame Inter-chr q24.12 q13.2 Transcription factor Seq+ 94547 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAPSA-COL1A2 NAPSA chr19 50361969 - COL1A2 chr7 94420541 + Exonic hg38 LUAD TCGA-J2-8192-01A 1 2 Out-of-frame Inter-chr q13.33 q21.3 94548 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGPAT3-APP AGPAT3 chr21 43904019 + APP chr21 25911962 - Exonic hg38 LUAD TCGA-J2-8194-01A 1 1 5'UTR-CDS Intra-chr q22.3 q21.3 94549 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPRIN1-TRIM44 CAPRIN1 chr11 34052636 + TRIM44 chr11 35806358 + Exonic hg38 LUAD TCGA-J2-A4AD-01A 5 2 Out-of-frame Intra-chr p13 p13 Seq+ 94550 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA4B-CERS3 SEMA4B chr15 90201735 + CERS3 chr15 100402865 - Exonic hg38 LUAD TCGA-J2-A4AD-01A 1 15 Out-of-frame Intra-chr q26.1 q26.3 Seq+ 94551 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAH14-EPHX1 DNAH14 chr1 224929835 + EPHX1 chr1 225828725 + Exonic hg38 LUAD TCGA-J2-A4AD-01A 2 7 5'UTR-5'UTR Intra-chr q42.12 q42.12 Seq+ 94552 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPHA10-COL8A2 EPHA10 chr1 37727102 - COL8A2 chr1 36115752 - Exonic hg38 LUAD TCGA-J2-A4AD-01A 2 7 CDS-5'UTR Intra-chr p34.3 p34.3 Seq+ 94553 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSNARE1-COL22A1 TSNARE1 chr8 142284413 - COL22A1 chr8 138821411 - Exonic hg38 LUAD TCGA-J2-A4AE-01A 2 18 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 94554 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREBBP-LUC7L CREBBP chr16 3778011 - LUC7L chr16 193015 - Exonic hg38 LUAD TCGA-J2-A4AG-01A 3 2 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 94555 ChimerSeq TCGA FAWG TCGA_RNA-Seq USB1-DRC7 USB1 chr16 58002645 + DRC7 chr16 57727299 + Exonic hg38 LUAD TCGA-L4-A4E5-01A 27 102 Out-of-frame Intra-chr q21 q21 94556 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFTPB-IGHA1 SFTPB chr2 85662029 - IGHA1 chr14 105708144 - Exonic hg38 LUAD TCGA-L4-A4E6-01A 1 11 Out-of-frame Inter-chr p11.2 94557 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD40-LRRC6 ANKRD40 chr17 50696940 - LRRC6 chr8 132610261 - Exonic hg38 LUAD TCGA-L9-A443-01A 26 39 In-Frame Inter-chr q21.33 q24.22 Seq+ 94558 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAS2R41-IGHJ4 TAS2R41 chr7 143477984 + IGHJ4 chr14 105864258 - Exonic hg38 LUAD TCGA-L9-A444-01A 75 0 Out-of-frame Inter-chr q35 94559 ChimerSeq TCGA FAWG TCGA_RNA-Seq APH1A-SLAMF1 APH1A chr1 150267075 - SLAMF1 chr1 160610798 - Exonic hg38 LUAD TCGA-L9-A444-01A 9 100 In-Frame Intra-chr q21.2 q23.3 Seq+ 94560 ChimerSeq TCGA FAWG TCGA_RNA-Seq MID1-S100A2 MID1 chrX 10833554 - S100A2 chr1 153563887 - Exonic hg38 LUAD TCGA-L9-A444-01A 2 28 5'UTR-5'UTR Inter-chr p22.2 q21.3 Tumor suppressor gene Seq+ 94561 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAZ1A-1 BAZ1A chr14 34862044 - 1 chr14 36519370 - Exonic hg38 LUAD TCGA-L9-A444-01A 2 8 CDS-5'UTR Intra-chr q13.2 94562 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAST2-NDC1 MAST2 chr1 45804072 + NDC1 chr1 53772489 - Exonic hg38 LUAD TCGA-L9-A5IP-01A 15 2 In-Frame Intra-chr p34.1 AGC:MAST p32.3 Seq+ 94563 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE4D-RFWD2 PDE4D chr5 59768247 - RFWD2 chr1 175947239 - Exonic hg38 LUAD TCGA-L9-A5IP-01A 3 12 Out-of-frame Inter-chr q12.1 q25.2 Tumor suppressor gene Seq+ 94564 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGO3-PIK3CD AGO3 chr1 36014048 + PIK3CD chr1 9710424 + Exonic hg38 LUAD TCGA-L9-A5IP-01A 1 2 CDS-5'UTR Intra-chr p34.3 p36.22 Oncogene 94565 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC61A2-IGHJ4 SEC61A2 chr10 12129769 + IGHJ4 chr14 105864252 - Exonic hg38 LUAD TCGA-L9-A743-01A 14 0 Out-of-frame Inter-chr p14 Seq+ 94566 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFHD2-FHAD1 EFHD2 chr1 15410279 + FHAD1 chr1 15369370 + Exonic hg38 LUAD TCGA-L9-A7SV-01A 1 8 In-Frame Intra-chr p36.21 p36.21 Seq+ 94567 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRAMD1A-KRTDAP GRAMD1A chr19 35009329 + KRTDAP chr19 35487759 - Exonic hg38 LUAD TCGA-L9-A8F4-01A 3 9 In-Frame Intra-chr q13.11 q13.12 Seq+ 94568 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERLEC1-ACYP2 ERLEC1 chr2 53813073 + ACYP2 chr2 54050958 + Exonic hg38 LUAD TCGA-L9-A8F4-01A 3 8 In-Frame Intra-chr p16.2 p16.2 Seq+ 94569 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D5-SETD5 TBC1D5 chr3 17428450 - SETD5 chr3 9435728 + Exonic hg38 LUAD TCGA-L9-A8F4-01A 1 6 Out-of-frame Intra-chr p24.3 p25.3 Seq+ 94570 ChimerSeq TCGA FAWG TCGA_RNA-Seq ORAOV1-NARS2 ORAOV1 chr11 69673216 - NARS2 chr11 78571444 - Exonic hg38 LUAD TCGA-MN-A4N1-01A 9 38 Out-of-frame Intra-chr q13.3 q14.1 Seq+ 94571 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLD3-TENM4 POLD3 chr11 74620089 + TENM4 chr11 79070009 - Exonic hg38 LUAD TCGA-MN-A4N1-01A 9 17 5'UTR-5'UTR Intra-chr q13.4 q14.1 Seq+ 94572 ChimerSeq TCGA FAWG TCGA_RNA-Seq HLCS-STRA8 HLCS chr21 36896860 - STRA8 chr7 135240519 + Exonic hg38 LUAD TCGA-MN-A4N1-01A 1 13 CDS-5'UTR Inter-chr q22.13 q33 Seq+ 94573 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRP54-THRSP SRP54 chr14 34983215 + THRSP chr11 78067659 + Exonic hg38 LUAD TCGA-MN-A4N1-01A 1 8 5'UTR-3'UTR Inter-chr q13.2 q14.1 94574 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3D-SPC24 RAB3D chr19 11335447 - SPC24 chr19 11131607 - Exonic hg38 LUAD TCGA-MN-A4N4-01A 14 34 CDS-3'UTR Intra-chr p13.2 p13.2 94575 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP4R1-MTCL1 PPP4R1 chr18 9559419 - MTCL1 chr18 8786055 + Exonic hg38 LUAD TCGA-MN-A4N4-01A 3 17 In-Frame Intra-chr p11.22 p11.22 94576 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNED1-PPP1R7 SNED1 chr2 240999050 + PPP1R7 chr2 241163285 + Exonic hg38 LUAD TCGA-MN-A4N5-01A 39 58 In-Frame Intra-chr q37.3 q37.3 Seq+ 94577 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHKB-PDE3A PHKB chr16 47669417 + PDE3A chr12 20646490 + Exonic hg38 LUAD TCGA-MN-A4N5-01A 3 11 Out-of-frame Inter-chr q12.1 p12.2 Seq+ 94578 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF146-NCAM2 ZNF146 chr19 36215196 + NCAM2 chr21 21324383 + Exonic hg38 LUAD TCGA-MN-A4N5-01A 1 19 5'UTR-CDS Inter-chr q13.12 Transcription factor q21.1 Tumor suppressor gene Seq+ 94579 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC38A9-KCNIP1 SLC38A9 chr5 55649207 - KCNIP1 chr5 170732800 + Exonic hg38 LUAD TCGA-MN-A4N5-01A 2 11 Out-of-frame Intra-chr q11.2 q35.1 Seq+ 94580 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMMECR1-PLA2G12B AMMECR1 chrX 110264489 - PLA2G12B chr10 72942740 - Exonic hg38 LUAD TCGA-MN-A4N5-01A 1 5 Out-of-frame Inter-chr q23 q22.1 Seq+ 94581 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTK2-ANGPT1 PTK2 chr8 141001125 - ANGPT1 chr8 107497506 - Exonic hg38 LUAD TCGA-MP-A4SV-01A 11 45 5'UTR-5'UTR Intra-chr q24.3 q23.1 Seq+ 94582 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBFA2T2-DOK5 CBFA2T2 chr20 33490301 + DOK5 chr20 54643458 + Exonic hg38 LUAD TCGA-MP-A4SV-01A 8 8 Out-of-frame Intra-chr q11.21 q13.2 Seq+ 94583 ChimerSeq TCGA FAWG TCGA_RNA-Seq HEBP1-CREBL2 HEBP1 chr12 13000037 - CREBL2 chr12 12635777 + Exonic hg38 LUAD TCGA-MP-A4SV-01A 3 7 CDS-3'UTR Intra-chr p13.1 p13.1 Transcription factor Seq+ 94584 ChimerSeq TCGA FAWG TCGA_RNA-Seq KREMEN1-ENTHD1 KREMEN1 chr22 29098953 + ENTHD1 chr22 39835958 - Exonic hg38 LUAD TCGA-MP-A4SV-01A 2 5 In-Frame Intra-chr q12.1 q13.1 Seq+ 94585 ChimerSeq TCGA FAWG TCGA_RNA-Seq WFDC3-OSBPL2 WFDC3 chr20 45758392 - OSBPL2 chr20 62259981 + Exonic hg38 LUAD TCGA-MP-A4SV-01A 1 7 3'UTR-CDS Intra-chr q13.12 q13.33 94586 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM170A-ADAT1 TMEM170A chr16 75464232 - ADAT1 chr16 75603171 - Exonic hg38 LUAD TCGA-MP-A4SV-01A 1 6 Out-of-frame Intra-chr q23.1 q23.1 94587 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDI2-MTOR DDI2 chr1 15617808 + MTOR chr1 11167517 - Exonic hg38 LUAD TCGA-MP-A4SW-01A 4 26 Out-of-frame Intra-chr p36.21 p36.22 Oncogene Seq+ 94588 ChimerSeq TCGA FAWG TCGA_RNA-Seq SART3-CORO1C SART3 chr12 108560843 - CORO1C chr12 108647522 - Exonic hg38 LUAD TCGA-MP-A4SW-01A 3 22 In-Frame Intra-chr q23.3 q24.11 Seq+ 94589 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDHB-MST1L SDHB chr1 17053948 - MST1L chr1 16761102 - Exonic hg38 LUAD TCGA-MP-A4SW-01A 2 11 Out-of-frame Intra-chr p36.13 Oncogene Tumor suppressor gene p36.13 Seq+ 94590 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNNAL1-FAM206A CTNNAL1 chr9 108990726 - FAM206A chr9 108950507 + Exonic hg38 LUAD TCGA-MP-A4SW-01A 1 12 Out-of-frame Intra-chr q31.3 q31.3 94591 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHG5-TNFRSF8 PLEKHG5 chr1 6496493 - TNFRSF8 chr1 12142287 + Exonic hg38 LUAD TCGA-MP-A4SW-01A 1 11 Out-of-frame Intra-chr p36.31 Oncogene p36.22 Seq+ 94592 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRSF11-LAP3 SRSF11 chr1 70205780 + LAP3 chr4 17588819 + Exonic hg38 LUAD TCGA-MP-A4SW-01A 1 1 5'UTR-CDS Inter-chr p31.1 p15.32 94593 ChimerSeq TCGA FAWG TCGA_RNA-Seq BLOC1S3-GEMIN7 BLOC1S3 chr19 45179942 + GEMIN7 chr19 45090107 + Exonic hg38 LUAD TCGA-MP-A4T4-01A 2 6 3'UTR-5'UTR Intra-chr q13.32 q13.32 94594 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANBP10-SLC12A4 RANBP10 chr16 67744288 - SLC12A4 chr16 67952425 - Exonic hg38 LUAD TCGA-MP-A4T4-01A 1 3 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 94595 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBQLN1-KLC2 UBQLN1 chr9 83703522 - KLC2 chr11 66265964 + Exonic hg38 LUAD TCGA-MP-A4T6-01A 19 78 Out-of-frame Inter-chr q21.32 q13.2 Seq+ 94596 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSKU-SMTN TSKU chr11 76797893 + SMTN chr22 31103813 + Exonic hg38 LUAD TCGA-MP-A4T6-01A 14 20 Out-of-frame Inter-chr q13.5 q12.2 94597 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP5-KIAA0391 ARHGAP5 chr14 32117287 + KIAA0391 chr14 35273435 + Exonic hg38 LUAD TCGA-MP-A4T6-01A 1 3 Out-of-frame Intra-chr q12 q13.2 94598 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRK-MYO1C CRK chr17 1423618 - MYO1C chr17 1472228 - Exonic hg38 LUAD TCGA-MP-A4T7-01A 7 24 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 94599 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPZ1-HNRNPA1 COPZ1 chr12 54343316 + HNRNPA1 chr12 54283812 + Exonic hg38 LUAD TCGA-MP-A4T8-01A 1 15 Out-of-frame Intra-chr q13.13 q13.13 94600 ChimerSeq TCGA FAWG TCGA_RNA-Seq KHDRBS3-PCAT2 KHDRBS3 chr8 135582073 + PCAT2 chr8 127079133 - Exonic hg38 LUAD TCGA-MP-A4T8-01A 1 7 CDS-3'UTR Intra-chr q24.23 q24.21 94601 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP2A1-SCAF1 AP2A1 chr19 49793092 + SCAF1 chr19 49645021 + Exonic hg38 LUAD TCGA-MP-A4T8-01A 1 5 CDS-5'UTR Intra-chr q13.33 q13.33 94602 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPATA6-BEND5 SPATA6 chr1 48471958 - BEND5 chr1 48736452 - Exonic hg38 LUAD TCGA-MP-A4T8-01A 1 1 In-Frame Intra-chr p33 p33 Seq+ 94603 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC18-TGS1 TNRC18 chr7 5370375 - TGS1 chr8 55813055 + Exonic hg38 LUAD TCGA-MP-A4T9-01A 1 35 In-Frame Inter-chr p22.1 q12.1 Tumor suppressor gene Seq+ 94604 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCB8-NOS3 ABCB8 chr7 151028610 + NOS3 chr7 151008930 + Exonic hg38 LUAD TCGA-MP-A4TA-01A 13 112 In-Frame Intra-chr q36.1 q36.1 Seq+ 94605 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELP3-PNOC ELP3 chr8 28107976 + PNOC chr8 28339040 + Exonic hg38 LUAD TCGA-MP-A4TE-01A 16 86 In-Frame Intra-chr p21.1 p21.1 Seq+ 94606 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCLRE1B-DNAJB4 DCLRE1B chr1 113905775 + DNAJB4 chr1 78016014 + Exonic hg38 LUAD TCGA-MP-A4TE-01A 4 14 In-Frame Intra-chr p13.2 p31.1 Tumor suppressor gene Seq+ 94607 ChimerSeq TCGA FAWG TCGA_RNA-Seq CALCA-SFTPB CALCA chr11 14968826 - SFTPB chr2 85658855 - Exonic hg38 LUAD TCGA-MP-A4TE-01A 1 9 3'UTR-3'UTR Inter-chr p15.2 p11.2 94608 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPT2-HSD17B2 GPT2 chr16 46922416 + HSD17B2 chr16 82070942 + Exonic hg38 LUAD TCGA-MP-A4TF-01A 1 10 Out-of-frame Intra-chr q11.2 q23.3 Seq+ 94609 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRD1-APOL5 BRD1 chr22 49794034 - APOL5 chr22 35729354 + Exonic hg38 LUAD TCGA-MP-A4TI-01A 5 19 3'UTR-3'UTR Intra-chr q13.33 q12.3 Seq+ 94610 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEMF-SOS2 NEMF chr14 49814754 - SOS2 chr14 50120384 - Exonic hg38 LUAD TCGA-MP-A4TI-01A 1 9 In-Frame Intra-chr q21.3 q21.3 Seq+ 94611 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA9-SEC13 ITGA9 chr3 37750569 + SEC13 chr3 10305692 - Exonic hg38 LUAD TCGA-MP-A4TK-01A 75 282 In-Frame Intra-chr p22.2 Oncogene p25.3 Seq+ 94612 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF217-PTGIS ZNF217 chr20 53597631 - PTGIS chr20 49514395 - Exonic hg38 LUAD TCGA-MP-A4TK-01A 23 141 5'UTR-CDS Intra-chr q13.2 Oncogene Transcription factor q13.13 94613 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D15-MARS TBC1D15 chr12 71880607 + MARS chr12 57487386 + Exonic hg38 LUAD TCGA-MP-A4TK-01A 5 52 5'UTR-5'UTR Intra-chr q21.1 q13.3 94614 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCSK5-OSTF1 PCSK5 chr9 75891373 + OSTF1 chr9 75146683 + Exonic hg38 LUAD TCGA-MP-A4TK-01A 3 27 Out-of-frame Intra-chr q21.13 q21.13 Seq+ 94615 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC117-OSTF1 CCDC117 chr22 28773778 + OSTF1 chr9 75146683 + Exonic hg38 LUAD TCGA-MP-A4TK-01A 3 15 Out-of-frame Inter-chr q12.1 q21.13 Seq+ 94616 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPBP1-BDNF GPBP1 chr5 57236032 + BDNF chr11 27658585 - Exonic hg38 LUAD TCGA-MP-A4TK-01A 1 18 Out-of-frame Inter-chr q11.2 Transcription factor p14.1 Seq+ 94617 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKL1-SCGB1C2 MKL1 chr22 40463221 - SCGB1C2 chr17 138910 + Exonic hg38 LUAD TCGA-MP-A4TK-01A 3 4 Out-of-frame Inter-chr q13.2 94618 ChimerSeq TCGA FAWG TCGA_RNA-Seq NR2C2-KIF15 NR2C2 chr3 14962492 + KIF15 chr3 44873329 + Exonic hg38 LUAD TCGA-MP-A4TK-01A 1 8 Out-of-frame Intra-chr p25.1 Tumor suppressor gene Transcription factor 94619 ChimerSeq TCGA FAWG TCGA_RNA-Seq TGFBR2-NR2C2 TGFBR2 chr3 30606977 + NR2C2 chr3 15013589 + Exonic hg38 LUAD TCGA-MP-A4TK-01A 1 6 Out-of-frame Intra-chr p24.1 Oncogene Tumor suppressor gene p25.1 Tumor suppressor gene Transcription factor Seq+ 94620 ChimerSeq TCGA FAWG TCGA_RNA-Seq KRI1-CCDC151 KRI1 chr19 10559359 - CCDC151 chr19 11424029 - Exonic hg38 LUAD TCGA-MP-A5C7-01A 11 131 In-Frame Intra-chr p13.2 p13.2 Seq+ 94621 ChimerSeq TCGA FAWG TCGA_RNA-Seq KSR1-EFCAB5 KSR1 chr17 27560456 + EFCAB5 chr17 29968791 + Exonic hg38 LUAD TCGA-MP-A5C7-01A 3 20 5'UTR-5'UTR Intra-chr q11.2 TKL:RAF q11.2 Seq+ 94622 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCCC1-MCF2L2 MCCC1 chr3 183033991 - MCF2L2 chr3 183231212 - Exonic hg38 LUAD TCGA-MP-A5C7-01A 3 13 3'UTR-CDS Intra-chr q27.1 q27.1 94623 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM241-SNX29 TMEM241 chr18 23399566 - SNX29 chr16 12398446 + Exonic hg38 LUAD TCGA-MP-A5C7-01A 1 4 In-Frame Inter-chr q11.2 p13.13 94624 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK11-ARHGAP45 STK11 chr19 1222006 + ARHGAP45 chr19 1080255 + Exonic hg38 LUAD TCGA-NJ-A4YF-01A 18 43 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 94625 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF490-PRDX2 ZNF490 chr19 12609158 - PRDX2 chr19 12797166 - Exonic hg38 LUAD TCGA-NJ-A4YF-01A 5 49 Out-of-frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 94626 ChimerSeq TCGA FAWG TCGA_RNA-Seq C16orf52-OTOA C16orf52 chr16 22008407 + OTOA chr16 21740721 + Exonic hg38 LUAD TCGA-NJ-A4YF-01A 8 12 Out-of-frame Intra-chr p12.2 Seq+ 94627 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMG1P3-STX4 SMG1P3 chr16 21484372 - STX4 chr16 31037926 + Exonic hg38 LUAD TCGA-NJ-A4YF-01A 3 23 3'UTR-CDS Intra-chr p12.2 p11.2 94628 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR3E-C16orf52 POLR3E chr16 22318946 + C16orf52 chr16 22075487 + Exonic hg38 LUAD TCGA-NJ-A4YF-01A 1 18 Out-of-frame Intra-chr Seq+ 94629 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEMIP-ARNT2 CEMIP chr15 80922137 + ARNT2 chr15 80450880 + Exonic hg38 LUAD TCGA-NJ-A4YF-01A 2 11 Out-of-frame Intra-chr q25.1 q25.1 Transcription factor 94630 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNNA1-PLEKHG4B CTNNA1 chr5 138827718 + PLEKHG4B chr5 113251 + Exonic hg38 LUAD TCGA-NJ-A4YF-01A 1 9 In-Frame Intra-chr q31.2 Oncogene p15.33 94631 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAAH-RAD54L FAAH chr1 46406368 + RAD54L chr1 46267459 + Exonic hg38 LUAD TCGA-NJ-A4YF-01A 2 5 In-Frame Intra-chr p33 p34.1 Seq+ 94632 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPCAT3-LRRC23 LPCAT3 chr12 7018274 - LRRC23 chr12 6882196 + Exonic hg38 LUAD TCGA-NJ-A4YF-01A 1 9 CDS-5'UTR Intra-chr p13.31 p13.31 Seq+ 94633 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPCAT3-RPL13P5 LPCAT3 chr12 7018274 - RPL13P5 chr12 6882196 + Exonic hg38 LUAD TCGA-NJ-A4YF-01A 1 9 CDS-5'UTR Intra-chr p13.31 p13.31 94634 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R3F-CCDC120 PPP1R3F chrX 49282063 + CCDC120 chrX 49063861 + Exonic hg38 LUAD TCGA-NJ-A4YF-01A 1 9 In-Frame Intra-chr p11.23 p11.23 Seq+ 94635 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF1A-C2orf54 KIF1A chr2 240742929 - C2orf54 chr2 240891763 - Exonic hg38 LUAD TCGA-NJ-A4YF-01A 2 4 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 94636 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1B-ABCG8 PPM1B chr2 44218537 + ABCG8 chr2 43844507 + Exonic hg38 LUAD TCGA-NJ-A4YF-01A 2 4 In-Frame Intra-chr p21 p21 Seq+ 94637 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANBP17-GABRP RANBP17 chr5 170881896 + GABRP chr5 170811956 + Exonic hg38 LUAD TCGA-NJ-A4YF-01A 1 7 In-Frame Intra-chr q35.1 q35.1 Seq+ 94638 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2E3-WDR70 UBE2E3 chr2 180984093 + WDR70 chr5 37697655 + Exonic hg38 LUAD TCGA-NJ-A4YF-01A 1 6 Out-of-frame Inter-chr q31.3 p13.2 94639 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHCR24-TADA2B DHCR24 chr1 54865303 - TADA2B chr4 7054062 + Exonic hg38 LUAD TCGA-NJ-A4YF-01A 1 5 In-Frame Inter-chr p32.3 p16.1 94640 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCG2-WWOX PLCG2 chr16 81870935 + WWOX chr16 79211608 + Exonic hg38 LUAD TCGA-NJ-A4YF-01A 1 4 In-Frame Intra-chr q23.3 q23.1 Tumor suppressor gene Seq+ 94641 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPIRE2-CDK10 SPIRE2 chr16 89818538 + CDK10 chr16 89682314 + Exonic hg38 LUAD TCGA-NJ-A4YP-01A 4 16 Out-of-frame Intra-chr q24.3 q24.3 CMGC:CDK 94642 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS50-PPP6R3 VPS50 chr7 93297243 + PPP6R3 chr11 68544838 + Exonic hg38 LUAD TCGA-NJ-A4YQ-01A 1 6 In-Frame Inter-chr q21.2 q13.2 94643 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLAUR-ZNF576 PLAUR chr19 43665316 - ZNF576 chr19 43598831 + Exonic hg38 LUAD TCGA-NJ-A4YQ-01A 1 4 In-Frame Intra-chr q13.31 q13.31 Transcription factor Seq+ 94644 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOK-CINP MOK chr14 102304962 - CINP chr14 102359587 - Exonic hg38 LUAD TCGA-NJ-A55A-01A 1 4 In-Frame Intra-chr q32.31 CMGC:RCK q32.31 94645 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN3-CHRNA3 TSPAN3 chr15 77046789 - CHRNA3 chr15 78602264 - Exonic hg38 LUAD TCGA-NJ-A55O-01A 5 51 3'UTR-3'UTR Intra-chr q24.3 q25.1 Seq+ 94646 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEAK1-DNM1P46 PEAK1 chr15 77158503 - DNM1P46 chr15 99792899 - Exonic hg38 LUAD TCGA-NJ-A55O-01A 1 5 CDS-3'UTR Intra-chr q24.3 q26.3 94647 ChimerSeq TCGA FAWG TCGA_RNA-Seq EZR-ROS1 EZR chr6 158770764 - ROS1 chr6 117324415 - Exonic hg38 LUAD TCGA-NJ-A7XG-01A 58 242 In-Frame Intra-chr q25.3 q22.1 Oncogene KB Pub Seq+ 94648 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFNAR1-DCLRE1C IFNAR1 chr21 33341174 + DCLRE1C chr10 14909330 - Exonic hg38 LUAD TCGA-O1-A52J-01A 4 51 In-Frame Inter-chr q22.11 p13 Seq+ 94649 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITSN1-NEBL ITSN1 chr21 33642713 + NEBL chr10 20850502 - Exonic hg38 LUAD TCGA-O1-A52J-01A 4 44 5'UTR-CDS Inter-chr q22.11 p12.31 Seq+ 94650 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUNX1-CEP76 RUNX1 chr21 34834410 - CEP76 chr18 12686450 - Exonic hg38 LUAD TCGA-O1-A52J-01A 5 17 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor p11.21 Seq+ 94651 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLLT10-KCNJ6 MLLT10 chr10 21538912 + KCNJ6 chr21 37715131 - Exonic hg38 LUAD TCGA-O1-A52J-01A 2 20 Out-of-frame Inter-chr p12.31 Oncogene q22.13 Seq+ 94652 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASPH-OR13Z2P ASPH chr8 61633683 - OR13Z2P chr1 147445761 + Exonic hg38 LUAD TCGA-O1-A52J-01A 4 5 Out-of-frame Inter-chr q12.3 q21.1 94653 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTCL1-CCT8 MTCL1 chr18 8720496 + CCT8 chr21 29065105 - Exonic hg38 LUAD TCGA-O1-A52J-01A 1 16 In-Frame Inter-chr p11.22 q21.3 94654 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAS6-GPC5 GAS6 chr13 113863575 - GPC5 chr13 92866282 + Exonic hg38 LUAD TCGA-O1-A52J-01A 1 6 Out-of-frame Intra-chr q34 Oncogene q31.3 Tumor suppressor gene Seq+ 94655 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFG3L2-TIAM1 AFG3L2 chr18 12337341 - TIAM1 chr21 31130948 - Exonic hg38 LUAD TCGA-O1-A52J-01A 1 3 Out-of-frame Inter-chr p11.21 q22.11 Seq+ 94656 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKL2-GID4 MKL2 chr16 14218998 + GID4 chr17 18065180 + Exonic hg38 LUAD TCGA-S2-AA1A-01A 1 6 Out-of-frame Inter-chr p13.12 p11.2 94657 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOL12-GGA1 NOL12 chr22 37686475 + GGA1 chr22 37629998 + Exonic hg38 LUSC TCGA-18-3406-01A 2 6 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 94658 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH3-TANGO6 CDH3 chr16 68645750 + TANGO6 chr16 68974028 + Exonic hg38 LUSC TCGA-18-3409-01A 2 21 In-Frame Intra-chr q22.1 q22.1 94659 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUMA1-ABHD12 NUMA1 chr11 72069842 - ABHD12 chr20 25323430 - Exonic hg38 LUSC TCGA-18-3410-01A 8 73 5'UTR-CDS Inter-chr q13.4 Oncogene p11.21 Seq+ 94660 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFHC1-MAPK14 EFHC1 chr6 52362249 + MAPK14 chr6 36102571 + Exonic hg38 LUSC TCGA-18-3411-01A 4 6 5'UTR-5'UTR Intra-chr p12.2 p21.31 94661 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAQR8-MAPK14 PAQR8 chr6 52362249 + MAPK14 chr6 36102571 + Exonic hg38 LUSC TCGA-18-3411-01A 4 6 5'UTR-5'UTR Intra-chr p12.2 p21.31 Seq+ 94662 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDHD1-PLEKHG3 DDHD1 chr14 53072597 - PLEKHG3 chr14 64736853 + Exonic hg38 LUSC TCGA-18-3411-01A 1 6 Out-of-frame Intra-chr q22.1 q23.3 94663 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK3-ENTPD5 MARK3 chr14 103480490 + ENTPD5 chr14 74015930 - Exonic hg38 LUSC TCGA-18-3411-01A 1 2 CDS-5'UTR Intra-chr q32.32 CAMK:CAMKL q24.3 Seq+ 94664 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAN-GRM7 GAN chr16 81315280 + GRM7 chr3 7146452 + Exonic hg38 LUSC TCGA-18-3412-01A 1 4 Out-of-frame Inter-chr q23.2 p26.1 Seq+ 94665 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL35-CTNNA2 MRPL35 chr2 86207327 + CTNNA2 chr2 80544982 + Exonic hg38 LUSC TCGA-18-3414-01A 33 257 In-Frame Intra-chr p11.2 p12 Tumor suppressor gene Seq+ 94666 ChimerSeq TCGA FAWG TCGA_RNA-Seq KITLG-TNNC1 KITLG chr12 88580264 - TNNC1 chr3 52452513 - Exonic hg38 LUSC TCGA-18-3414-01A 2 6 In-Frame Inter-chr q21.32 p21.1 Seq+ 94667 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAA15-MGST2 NAA15 chr4 139344339 + MGST2 chr4 139678543 + Exonic hg38 LUSC TCGA-18-3414-01A 1 3 In-Frame Intra-chr q31.1 q31.1 Seq+ 94668 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFE2L2-ZC3H13 NFE2L2 chr2 177264532 - ZC3H13 chr13 45980004 - Exonic hg38 LUSC TCGA-18-3415-01A 172 611 Out-of-frame Inter-chr q31.2 Oncogene Transcription factor q14.13 Seq+ 94669 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOOK2-RTBDN HOOK2 chr19 12774669 - RTBDN chr19 12826871 - Exonic hg38 LUSC TCGA-18-3415-01A 89 541 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 94670 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBQLN1-2HG UBQLN1 chr9 83707500 - 2HG chr2 111429620 - Exonic hg38 LUSC TCGA-18-3415-01A 11 61 Out-of-frame Inter-chr q21.32 94671 ChimerSeq TCGA FAWG TCGA_RNA-Seq C6orf62-FAM65B C6orf62 chr6 24716148 - FAM65B chr6 24818625 - Exonic hg38 LUSC TCGA-18-3415-01A 12 42 Out-of-frame Intra-chr p22.3 Seq+ 94672 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR4435-TXNL4A MIR4435 chr2 111494885 - TXNL4A chr18 79977701 - Exonic hg38 LUSC TCGA-18-3415-01A 6 23 Out-of-frame Inter-chr q23 94673 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMTOR4-AP4M1 LAMTOR4 chr7 100149579 + AP4M1 chr7 100101708 + Exonic hg38 LUSC TCGA-18-3415-01A 4 17 5'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 94674 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP5-PAK2 SENP5 chr3 196886694 + PAK2 chr3 196827196 + Exonic hg38 LUSC TCGA-18-3415-01A 2 18 Out-of-frame Intra-chr q29 q29 STE:STE20 Seq+ 94675 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H13-NFE2L2 ZC3H13 chr13 45979813 - NFE2L2 chr2 177283804 - Exonic hg38 LUSC TCGA-18-3415-01A 2 7 CDS-5'UTR Inter-chr q14.13 q31.2 Oncogene Transcription factor Seq+ 94676 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF167-PLD2 RNF167 chr17 4942941 + PLD2 chr17 4817146 + Exonic hg38 LUSC TCGA-18-3415-01A 1 4 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 94677 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX34-C5AR1 DHX34 chr19 47349352 + C5AR1 chr19 47291978 + Exonic hg38 LUSC TCGA-18-3415-01A 1 1 5'UTR-5'UTR Intra-chr q13.32 q13.32 94678 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLS1-TFDP2 PLS1 chr3 142596509 + TFDP2 chr3 141963963 - Exonic hg38 LUSC TCGA-18-3416-01A 5 38 5'UTR-CDS Intra-chr q23 q23 Transcription factor Seq+ 94679 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLPH3-LRTM1 GOLPH3 chr5 32135572 - LRTM1 chr3 54918892 - Exonic hg38 LUSC TCGA-18-3416-01A 2 3 In-Frame Inter-chr p13.3 p14.3 Seq+ 94680 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGKV2D-IGKJ5 IGKV2D chr2 89986701 + IGKJ5 chr2 88860600 - Exonic hg38 LUSC TCGA-18-3417-01A 66 13 Out-of-frame Intra-chr p11.2 94681 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF8-NME7 DCAF8 chr1 160261285 - NME7 chr1 169310080 - Exonic hg38 LUSC TCGA-18-3417-01A 17 95 5'UTR-CDS Intra-chr q23.2 q24.2 Seq+ 94682 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3GAP1-CCNT2 RAB3GAP1 chr2 135058086 + CCNT2 chr2 134936841 + Exonic hg38 LUSC TCGA-18-3419-01A 3 14 In-Frame Intra-chr q21.3 q21.3 Seq+ 94683 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL24-SLC9A9 RPL24 chr3 101682429 - SLC9A9 chr3 143495448 - Exonic hg38 LUSC TCGA-18-3421-01A 1 57 In-Frame Intra-chr q12.3 q24 Seq+ 94684 ChimerSeq TCGA FAWG TCGA_RNA-Seq NXF1-WDR74 NXF1 chr11 62805329 - WDR74 chr11 62839659 - Exonic hg38 LUSC TCGA-18-3421-01A 3 26 CDS-5'UTR Intra-chr q12.3 q12.3 Seq+ 94685 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNS1-FAP TNS1 chr2 217978765 - FAP chr2 162243500 - Exonic hg38 LUSC TCGA-18-3421-01A 5 8 Out-of-frame Intra-chr q35 q24.2 Seq+ 94686 ChimerSeq TCGA FAWG TCGA_RNA-Seq RABEPK-PIK3R1 RABEPK chr9 125207721 + PIK3R1 chr5 68273390 + Exonic hg38 LUSC TCGA-18-3421-01A 4 3 In-Frame Inter-chr q33.3 q13.1 Oncogene Seq+ 94687 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS35-PPFIBP1 MRPS35 chr12 27737608 + PPFIBP1 chr12 27687385 + Exonic hg38 LUSC TCGA-18-3421-01A 3 6 In-Frame Intra-chr p11.22 p11.23 Seq+ 94688 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK10-UGT8 MAPK10 chr4 86453030 - UGT8 chr4 114622879 + Exonic hg38 LUSC TCGA-18-3421-01A 1 9 5'UTR-5'UTR Intra-chr q21.3 Tumor suppressor gene q26 Seq+ 94689 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPQ-COL14A1 CPQ chr8 96645402 + COL14A1 chr8 120367171 + Exonic hg38 LUSC TCGA-18-3421-01A 2 3 5'UTR-CDS Intra-chr q22.1 q24.12 94690 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLDN12-STEAP1 CLDN12 chr7 90494430 + STEAP1 chr7 90159758 + Exonic hg38 LUSC TCGA-18-3421-01A 1 5 3'UTR-5'UTR Intra-chr q21.13 q21.13 94691 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC39C-DIRC2 TTC39C chr18 24069271 + DIRC2 chr3 122872415 + Exonic hg38 LUSC TCGA-18-3421-01A 1 4 Out-of-frame Inter-chr q11.2 q21.1 94692 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS18-ZFYVE19 VPS18 chr15 40896079 + ZFYVE19 chr15 40814148 + Exonic hg38 LUSC TCGA-18-3421-01A 1 3 In-Frame Intra-chr q15.1 q15.1 94693 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRAP-FAM216A BRAP chr12 111665639 - FAM216A chr12 110490019 + Exonic hg38 LUSC TCGA-18-4083-01A 49 268 Out-of-frame Intra-chr q24.12 q24.11 Seq+ 94694 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPN3-MIR99AHG GPN3 chr12 110468156 - MIR99AHG chr21 16391614 + Exonic hg38 LUSC TCGA-18-4083-01A 2 21 CDS-5'UTR Inter-chr q24.11 q21.1 94695 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1A-NIPBL ARID1A chr1 26775707 + NIPBL chr5 36995622 + Exonic hg38 LUSC TCGA-18-4083-01A 1 11 Out-of-frame Inter-chr p36.11 Oncogene Tumor suppressor gene p13.2 Seq+ 94696 ChimerSeq TCGA FAWG TCGA_RNA-Seq OAS2-HECTD4 OAS2 chr12 112978785 + HECTD4 chr12 112319742 - Exonic hg38 LUSC TCGA-18-4083-01A 1 4 In-Frame Intra-chr q24.13 q24.13 94697 ChimerSeq TCGA FAWG TCGA_RNA-Seq PELP1-CHRNE PELP1 chr17 4703863 - CHRNE chr17 4902763 - Exonic hg38 LUSC TCGA-18-4083-01A 1 2 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 94698 ChimerSeq TCGA FAWG TCGA_RNA-Seq NADSYN1-PLET1 NADSYN1 chr11 71481404 + PLET1 chr11 112252409 - Exonic hg38 LUSC TCGA-18-4086-01A 4 8 Out-of-frame Intra-chr q13.4 q23.1 94699 ChimerSeq TCGA FAWG TCGA_RNA-Seq YWHAQ-ADAM17 YWHAQ chr2 9630159 - ADAM17 chr2 9510131 - Exonic hg38 LUSC TCGA-18-4086-01A 1 6 In-Frame Intra-chr p25.1 p25.1 94700 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLG1-ZIC1 DLG1 chr3 197282679 - ZIC1 chr3 147413354 + Exonic hg38 LUSC TCGA-18-4086-01A 1 2 In-Frame Intra-chr q29 Tumor suppressor gene q24 Tumor suppressor gene Transcription factor 94701 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITFG2-TULP3 ITFG2 chr12 2812856 + TULP3 chr12 2937631 + Exonic hg38 LUSC TCGA-18-4721-01A 9 28 In-Frame Intra-chr p13.33 p13.33 Seq+ 94702 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACIN1-HAUS4 ACIN1 chr14 23078151 - HAUS4 chr14 22955176 - Exonic hg38 LUSC TCGA-18-4721-01A 6 36 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 94703 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFX1-ACO1 NFX1 chr9 33351790 + ACO1 chr9 32440465 + Exonic hg38 LUSC TCGA-18-4721-01A 3 8 In-Frame Intra-chr p13.3 Transcription factor p21.1 Seq+ 94704 ChimerSeq TCGA FAWG TCGA_RNA-Seq PACSIN2-A4GALT PACSIN2 chr22 43015021 - A4GALT chr22 42695631 - Exonic hg38 LUSC TCGA-18-5595-01A 5 21 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 94705 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGAP1-NCKAP5 PGAP1 chr2 196926470 - NCKAP5 chr2 132673305 - Exonic hg38 LUSC TCGA-21-1070-01A 3 15 Out-of-frame Intra-chr q33.1 q21.2 Seq+ 94706 ChimerSeq TCGA FAWG TCGA_RNA-Seq YBX3-APOLD1 YBX3 chr12 10715694 - APOLD1 chr12 12829423 + Exonic hg38 LUSC TCGA-21-1070-01A 3 11 CDS-3'UTR Intra-chr p13.2 Transcription factor p13.1 Seq+ 94707 ChimerSeq TCGA FAWG TCGA_RNA-Seq YBX3-DDX47 YBX3 chr12 10715694 - DDX47 chr12 12829423 + Exonic hg38 LUSC TCGA-21-1070-01A 3 11 In-Frame Intra-chr p13.2 Transcription factor p13.1 Seq+ 94708 ChimerSeq TCGA FAWG TCGA_RNA-Seq AAAS-ITGB7 AAAS chr12 53314298 - ITGB7 chr12 53200446 - Exonic hg38 LUSC TCGA-21-1070-01A 2 3 CDS-5'UTR Intra-chr q13.13 q13.13 94709 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP17-SNRNP25 ARHGAP17 chr16 24964197 - SNRNP25 chr16 56539 + Exonic hg38 LUSC TCGA-21-1070-01A 1 7 Out-of-frame Intra-chr p12.1 p13.3 94710 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM114A1-EEPD1 FAM114A1 chr4 38878426 + EEPD1 chr7 36281115 + Exonic hg38 LUSC TCGA-21-1070-01A 1 6 In-Frame Inter-chr p14 p14.2 Seq+ 94711 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP2-ANKRD27 SENP2 chr3 185586514 + ANKRD27 chr19 32642145 - Exonic hg38 LUSC TCGA-21-1071-01A 7 15 In-Frame Inter-chr q27.2 q13.11 Seq+ 94712 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP2A2-EPS8L2 AP2A2 chr11 994245 + EPS8L2 chr11 720062 + Exonic hg38 LUSC TCGA-21-1071-01A 3 16 3'UTR-CDS Intra-chr p15.5 p15.5 Seq+ 94713 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL24-CEP89 KLHL24 chr3 183651276 + CEP89 chr19 32901412 - Exonic hg38 LUSC TCGA-21-1071-01A 3 16 In-Frame Inter-chr q27.1 q13.11 Seq+ 94714 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXW2-MEGF9 FBXW2 chr9 120771348 - MEGF9 chr9 120659575 - Exonic hg38 LUSC TCGA-21-1071-01A 3 15 Out-of-frame Intra-chr q33.2 q33.2 Seq+ 94715 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC47A2-FADS2 SLC47A2 chr17 19702605 - FADS2 chr11 61857011 + Exonic hg38 LUSC TCGA-21-1071-01A 3 6 In-Frame Inter-chr p11.2 q12.2 Seq+ 94716 ChimerSeq TCGA FAWG TCGA_RNA-Seq YEATS2-LIPH YEATS2 chr3 183697993 + LIPH chr3 185535132 - Exonic hg38 LUSC TCGA-21-1071-01A 1 9 5'UTR-CDS Intra-chr q27.1 q27.2 94717 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK38L-SMCO2 STK38L chr12 27244332 + SMCO2 chr12 27474786 + Exonic hg38 LUSC TCGA-21-1072-01A 7 5 5'UTR-CDS Intra-chr p11.23 p11.23 Seq+ 94718 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR2-EIF4A2 FGFR2 chr10 121483698 - EIF4A2 chr3 186787127 + Exonic hg38 LUSC TCGA-21-1075-01A 2 1 In-Frame Inter-chr q26.13 TK:FGFR Oncogene q27.3 94719 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARL15-MOCS2 ARL15 chr5 54307888 - MOCS2 chr5 53108643 - Exonic hg38 LUSC TCGA-21-1079-01A 1 6 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 94720 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF19A-PRSS3 RNF19A chr8 100309867 - PRSS3 chr9 33796643 + Exonic hg38 LUSC TCGA-21-1080-01A 96 212 5'UTR-CDS Inter-chr q22.2 p13.3 Seq+ 94721 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC2-SLC26A5 DNAJC2 chr7 103337736 - SLC26A5 chr7 103389114 - Exonic hg38 LUSC TCGA-21-1080-01A 20 73 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 94722 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC22A23-TRAF3 SLC22A23 chr6 3410188 - TRAF3 chr14 102870185 + Exonic hg38 LUSC TCGA-21-1081-01A 12 39 CDS-5'UTR Inter-chr p25.2 q32.32 Seq+ 94723 ChimerSeq TCGA FAWG TCGA_RNA-Seq PI4KA-RREB1 PI4KA chr22 20834562 - RREB1 chr6 7210804 + Exonic hg38 LUSC TCGA-21-1081-01A 12 36 Out-of-frame Inter-chr q11.21 p24.3 Transcription factor Seq+ 94724 ChimerSeq TCGA FAWG TCGA_RNA-Seq CXADR-FAM184B CXADR chr21 17565611 + FAM184B chr4 17664659 - Exonic hg38 LUSC TCGA-21-1081-01A 1 3 In-Frame Inter-chr q21.1 p15.31 94725 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM193A-TNIP2 FAM193A chr4 2700544 + TNIP2 chr4 2747945 - Exonic hg38 LUSC TCGA-21-1082-01A 13 68 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 94726 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM28-ZBTB45 TRIM28 chr19 58545097 + ZBTB45 chr19 58517673 - Exonic hg38 LUSC TCGA-21-1082-01A 9 44 CDS-5'UTR Intra-chr q13.43 q13.43 Transcription factor Seq+ 94727 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTSB-DEFB136 CTSB chr8 11849046 - DEFB136 chr8 11974118 - Exonic hg38 LUSC TCGA-21-1082-01A 4 33 3'UTR-3'UTR Intra-chr p23.1 p23.1 Seq+ 94728 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACVR2A-CASP8 ACVR2A chr2 147917426 + CASP8 chr2 201266461 + Exonic hg38 LUSC TCGA-21-1082-01A 3 25 Out-of-frame Intra-chr q22.3 Oncogene q33.1 Oncogene Tumor suppressor gene Seq+ 94729 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMX3-METTL4 TMX3 chr18 68711364 - METTL4 chr18 2567654 - Exonic hg38 LUSC TCGA-21-1083-01A 24 106 5'UTR-5'UTR Intra-chr q22.1 p11.32 Seq+ 94730 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAD2-CD226 SMAD2 chr18 47930361 - CD226 chr18 69896045 - Exonic hg38 LUSC TCGA-21-1083-01A 6 29 5'UTR-5'UTR Intra-chr q21.1 Oncogene Tumor suppressor gene q22.2 Seq+ 94731 ChimerSeq TCGA FAWG TCGA_RNA-Seq AAMP-MARCH4 AAMP chr2 218269382 - 2019_ 3_ 4_ chr2 216259679 - Exonic hg38 LUSC TCGA-21-1083-01A 4 22 Out-of-frame Intra-chr q35 q35 Seq+ 94732 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHLPP1-WDR12 PHLPP1 chr18 62920114 + WDR12 chr2 202894626 - Exonic hg38 LUSC TCGA-21-1083-01A 3 18 Out-of-frame Inter-chr q21.33 Tumor suppressor gene q33.2 Seq+ 94733 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS12-FBXO38 ADAMTS12 chr5 33751404 - FBXO38 chr5 148433424 + Exonic hg38 LUSC TCGA-21-5782-01A 2 1 In-Frame Intra-chr p13.2 q32 94734 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT7-SAP30 GALNT7 chr4 173168961 + SAP30 chr4 173373390 + Exonic hg38 LUSC TCGA-21-5783-01A 12 38 In-Frame Intra-chr q34.1 q34.1 Seq+ 94735 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H15-FAM171B ZC3H15 chr2 186501425 + FAM171B chr2 186740228 + Exonic hg38 LUSC TCGA-21-5783-01A 1 3 In-Frame Intra-chr q32.1 q32.1 Seq+ 94736 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBCK-PAPSS1 TBCK chr4 106171095 - PAPSS1 chr4 107631860 - Exonic hg38 LUSC TCGA-21-5783-01A 1 2 In-Frame Intra-chr q24 Other:TBCK q25 94737 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM127-ZAP70 TMEM127 chr2 96253850 - ZAP70 chr2 97732883 + Exonic hg38 LUSC TCGA-21-5786-01A 4 16 CDS-5'UTR Intra-chr q11.2 Tumor suppressor gene q11.2 TK:Syk Seq+ 94738 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPY19L1-CDKAL1 DPY19L1 chr7 34989884 - CDKAL1 chr6 21198021 + Exonic hg38 LUSC TCGA-21-5787-01A 5 22 In-Frame Inter-chr p14.2 p22.3 Seq+ 94739 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2E2-TOGARAM1 UBE2E2 chr3 23217312 + TOGARAM1 chr14 45043686 + Exonic hg38 LUSC TCGA-21-5787-01A 6 9 In-Frame Inter-chr p24.3 q21.2 94740 ChimerSeq TCGA FAWG TCGA_RNA-Seq GBAS-PSPH GBAS chr7 55964701 + PSPH chr7 56015171 - Exonic hg38 LUSC TCGA-21-A5DI-01A 44 340 Out-of-frame Intra-chr p11.2 Seq+ 94741 ChimerSeq TCGA FAWG TCGA_RNA-Seq LUC7L3-SPATA20 LUC7L3 chr17 50719831 + SPATA20 chr17 50547068 + Exonic hg38 LUSC TCGA-21-A5DI-01A 9 36 CDS-5'UTR Intra-chr q21.33 q21.33 Seq+ 94742 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS17-PSPH MRPS17 chr7 55951930 + PSPH chr7 56015171 - Exonic hg38 LUSC TCGA-21-A5DI-01A 1 9 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 94743 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRD5A1-MBTD1 SRD5A1 chr5 6633869 + MBTD1 chr17 51180694 - Exonic hg38 LUSC TCGA-21-A5DI-01A 2 1 In-Frame Inter-chr p15.31 q21.33 94744 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRGV2-TRGJP2 TRGV2 chr7 38362875 - TRGJP2 chr7 38256387 - Exonic hg38 LUSC TCGA-22-0940-01A 3 6 Out-of-frame Intra-chr p14.1 p14.1 94745 ChimerSeq TCGA FAWG TCGA_RNA-Seq HACD3-RAB11A HACD3 chr15 65530718 + RAB11A chr15 65850864 + Exonic hg38 LUSC TCGA-22-0940-01A 1 13 CDS-5'UTR Intra-chr q22.31 q22.31 94746 ChimerSeq TCGA FAWG TCGA_RNA-Seq CERS6-G6PC2 CERS6 chr2 168717978 + G6PC2 chr2 168907568 + Exonic hg38 LUSC TCGA-22-0940-01A 2 7 CDS-3'UTR Intra-chr q24.3 Seq+ 94747 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE4D-MCTP1 PDE4D chr5 59586329 - MCTP1 chr5 95017484 - Exonic hg38 LUSC TCGA-22-0940-01A 1 8 Out-of-frame Intra-chr q12.1 q15 Seq+ 94748 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNY-GJD4 CCNY chr10 35337207 + GJD4 chr10 35607578 + Exonic hg38 LUSC TCGA-22-0940-01A 1 6 In-Frame Intra-chr p11.21 p11.21 94749 ChimerSeq TCGA FAWG TCGA_RNA-Seq VTI1A-TCF7L2 VTI1A chr10 112538330 + TCF7L2 chr10 113040025 + Exonic hg38 LUSC TCGA-22-0940-01A 2 0 Out-of-frame Intra-chr q25.2 q25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 94750 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-ORMDL3 FBXL20 chr17 39401361 - ORMDL3 chr17 39924225 - Exonic hg38 LUSC TCGA-22-0944-01A 55 290 CDS-5'UTR Intra-chr q12 q21.1 Seq+ 94751 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-PPP1R1B ERBB2 chr17 39719834 + PPP1R1B chr17 39635816 + Exonic hg38 LUSC TCGA-22-0944-01A 6 10 Out-of-frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 94752 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-GSDMB FBXL20 chr17 39401361 - GSDMB chr17 39912497 - Exonic hg38 LUSC TCGA-22-0944-01A 3 19 Out-of-frame Intra-chr q12 q21.1 Seq+ 94753 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2O-PRPSAP1 UBE2O chr17 76452725 - PRPSAP1 chr17 76313891 - Exonic hg38 LUSC TCGA-22-0944-01A 3 4 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 94754 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF814-ZNF787 ZNF814 chr19 57888767 - ZNF787 chr19 56089092 - Exonic hg38 LUSC TCGA-22-1002-01A 1 7 Out-of-frame Intra-chr q13.43 Transcription factor q13.43 Transcription factor 94755 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTN4-CATSPERG ACTN4 chr19 38709476 + CATSPERG chr19 38358278 + Exonic hg38 LUSC TCGA-22-1005-01A 2 46 3'UTR-CDS Intra-chr q13.2 Seq+ 94756 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEDD9-1 NEDD9 chr6 11232504 - 1 chr6 11105630 - Exonic hg38 LUSC TCGA-22-1012-01A 6 29 CDS-3'UTR Intra-chr p24.2 94757 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEURL1-PDCD11 NEURL1 chr10 103494472 + PDCD11 chr10 103405985 + Exonic hg38 LUSC TCGA-22-1012-01A 3 9 Out-of-frame Intra-chr q24.33 Tumor suppressor gene q24.33 94758 ChimerSeq TCGA FAWG TCGA_RNA-Seq LARP4B-SMCO3 LARP4B chr10 836403 - SMCO3 chr12 14806696 - Exonic hg38 LUSC TCGA-22-1012-01A 1 9 CDS-5'UTR Inter-chr p15.3 p12.3 94759 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARFGEF3-XPO5 ARFGEF3 chr6 138170713 + XPO5 chr6 43534007 - Exonic hg38 LUSC TCGA-22-1012-01A 1 3 In-Frame Intra-chr q23.3 p21.1 Tumor suppressor gene 94760 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC12A8-BCAS1 SLC12A8 chr3 125135669 - BCAS1 chr20 53975430 - Exonic hg38 LUSC TCGA-22-1016-01A 9 21 Out-of-frame Inter-chr q21.2 q13.2 Seq+ 94761 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHG4B-AHRR PLEKHG4B chr5 144920 + AHRR chr5 343893 + Exonic hg38 LUSC TCGA-22-1016-01A 2 20 Out-of-frame Intra-chr p15.33 p15.33 Tumor suppressor gene Transcription factor Seq+ 94762 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHG4B-PDCD6 PLEKHG4B chr5 144920 + PDCD6 chr5 343893 + Exonic hg38 LUSC TCGA-22-1016-01A 2 20 CDS-3'UTR Intra-chr p15.33 p15.33 Seq+ 94763 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOP58-BMPR2 NOP58 chr2 202287724 + BMPR2 chr2 202464809 + Exonic hg38 LUSC TCGA-22-1016-01A 2 13 CDS-3'UTR Intra-chr q33.1 q33.1 TKL:STKR Tumor suppressor gene Seq+ 94764 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC61-PPP5C CCDC61 chr19 46003501 + PPP5C chr19 46383411 + Exonic hg38 LUSC TCGA-22-1016-01A 1 11 In-Frame Intra-chr q13.32 q13.32 94765 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFX1-UBE2R2 NFX1 chr9 33313793 + UBE2R2 chr9 33900174 + Exonic hg38 LUSC TCGA-22-1016-01A 3 3 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 94766 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMBL-DARS2 CMBL chr5 10307625 - DARS2 chr1 173850327 + Exonic hg38 LUSC TCGA-22-1016-01A 1 3 5'UTR-CDS Inter-chr p15.2 q25.1 Seq+ 94767 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM260-MLIP TMEM260 chr14 56585912 + MLIP chr6 54121447 + Exonic hg38 LUSC TCGA-22-1017-01A 9 116 Out-of-frame Inter-chr q22.3 p12.1 Seq+ 94768 ChimerSeq TCGA FAWG TCGA_RNA-Seq GCN1-CCND2 GCN1 chr12 120163070 - CCND2 chr12 4288842 + Exonic hg38 LUSC TCGA-22-1017-01A 4 10 In-Frame Intra-chr q24.23 p13.32 Oncogene 94769 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGKD-ATG16L1 DGKD chr2 233354674 + ATG16L1 chr2 233256102 + Exonic hg38 LUSC TCGA-22-1017-01A 2 15 CDS-3'UTR Intra-chr Seq+ 94770 ChimerSeq TCGA FAWG TCGA_RNA-Seq KITLG-CCDC6 KITLG chr12 88580264 - CCDC6 chr10 59852702 - Exonic hg38 LUSC TCGA-22-1017-01A 1 13 In-Frame Inter-chr q21.32 q21.2 Seq+ 94771 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1S-CD4 C1S chr12 6988369 + CD4 chr12 6814142 + Exonic hg38 LUSC TCGA-22-1017-01A 1 4 5'UTR-5'UTR Intra-chr p13.31 p13.31 Tumor suppressor gene 94772 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM7SF3-INTS13 TM7SF3 chr12 27014078 - INTS13 chr12 26914001 - Exonic hg38 LUSC TCGA-22-4591-01A 7 66 Out-of-frame Intra-chr p11.23 p11.23 94773 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDH2-STYXL1 MDH2 chr7 76048226 + STYXL1 chr7 76030527 - Exonic hg38 LUSC TCGA-22-4591-01A 7 63 5'UTR-5'UTR Intra-chr q11.23 q11.23 Seq+ 94774 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL22-PMM2 METTL22 chr16 8635312 + PMM2 chr16 8847724 + Exonic hg38 LUSC TCGA-22-4591-01A 3 20 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 94775 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPATA18-EXOC1 SPATA18 chr4 52051791 + EXOC1 chr4 55902344 + Exonic hg38 LUSC TCGA-22-4591-01A 4 5 In-Frame Intra-chr q12 q12 Seq+ 94776 ChimerSeq TCGA FAWG TCGA_RNA-Seq XXYLT1-TPRG1 XXYLT1 chr3 195156449 - TPRG1 chr3 189310386 + Exonic hg38 LUSC TCGA-22-4591-01A 3 4 In-Frame Intra-chr q29 q28 94777 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPDZ-ZPBP MPDZ chr9 13150511 - ZPBP chr7 49983519 - Exonic hg38 LUSC TCGA-22-4591-01A 1 6 In-Frame Inter-chr p23 p12.2 94778 ChimerSeq TCGA FAWG TCGA_RNA-Seq IPO7-WEE1 IPO7 chr11 9384847 + WEE1 chr11 9575888 + Exonic hg38 LUSC TCGA-22-4593-01A 23 40 In-Frame Intra-chr p15.4 p15.4 Seq+ 94779 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAPDH-COL3A1 GAPDH chr12 6537996 + COL3A1 chr2 188997700 + Exonic hg38 LUSC TCGA-22-4593-01A 1 20 Out-of-frame Inter-chr p13.31 q32.2 94780 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R5E-PLEKHH1 PPP2R5E chr14 63453689 - PLEKHH1 chr14 67541834 + Exonic hg38 LUSC TCGA-22-4593-01A 2 15 CDS-5'UTR Intra-chr q23.2 q24.1 Seq+ 94781 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM25-VRTN RBM25 chr14 73058705 + VRTN chr14 74337723 + Exonic hg38 LUSC TCGA-22-4593-01A 1 7 5'UTR-5'UTR Intra-chr q24.2 q24.3 Seq+ 94782 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE4B-KIF1B UBE4B chr1 10095596 + KIF1B chr1 10232250 + Exonic hg38 LUSC TCGA-22-4593-01A 1 3 CDS-5'UTR Intra-chr p36.22 Tumor suppressor gene p36.22 Tumor suppressor gene 94783 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMD12-RTN1 SAMD12 chr8 118621804 - RTN1 chr14 59607492 - Exonic hg38 LUSC TCGA-22-4594-01A 23 175 In-Frame Inter-chr q24.12 q23.1 Seq+ 94784 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPG5-ST8SIA5 EPG5 chr18 45967177 - ST8SIA5 chr18 46704664 - Exonic hg38 LUSC TCGA-22-4594-01A 2 15 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 94785 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF165-ZBTB7C RNF165 chr18 46326947 + ZBTB7C chr18 48185995 - Exonic hg38 LUSC TCGA-22-4594-01A 1 6 5'UTR-5'UTR Intra-chr q21.1 q21.1 Tumor suppressor gene Transcription factor 94786 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC14L2-HORMAD2 SEC14L2 chr22 30416087 + HORMAD2 chr22 30176063 + Exonic hg38 LUSC TCGA-22-4594-01A 1 3 Out-of-frame Intra-chr q12.2 Tumor suppressor gene q12.2 94787 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPBL-FGF10 NIPBL chr5 36962274 + FGF10 chr5 44310530 - Exonic hg38 LUSC TCGA-22-4595-01A 16 86 In-Frame Intra-chr p13.2 p12 Seq+ 94788 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC91-PDZRN4 CCDC91 chr12 28484165 + PDZRN4 chr12 41506456 + Exonic hg38 LUSC TCGA-22-4595-01A 2 11 In-Frame Intra-chr p11.22 q12 Seq+ 94789 ChimerSeq TCGA FAWG TCGA_RNA-Seq RABGGTB-FOXJ3 RABGGTB chr1 75786274 + FOXJ3 chr1 42182024 - Exonic hg38 LUSC TCGA-22-4601-01A 6 10 Out-of-frame Intra-chr p31.1 p34.2 Transcription factor Seq+ 94790 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACADM-FOXJ3 ACADM chr1 75786274 + FOXJ3 chr1 42182024 - Exonic hg38 LUSC TCGA-22-4601-01A 6 6 3'UTR-CDS Intra-chr p31.1 p34.2 Transcription factor Seq+ 94791 ChimerSeq TCGA FAWG TCGA_RNA-Seq PATJ-PRSS50 PATJ chr1 61927829 + PRSS50 chr3 46720003 - Exonic hg38 LUSC TCGA-22-4601-01A 1 6 CDS-5'UTR Inter-chr p31.3 p21.31 94792 ChimerSeq TCGA FAWG TCGA_RNA-Seq PATJ-PRSS46 PATJ chr1 61927829 + PRSS46 chr3 46720003 - Exonic hg38 LUSC TCGA-22-4601-01A 1 4 Out-of-frame Inter-chr p31.3 p21.31 94793 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFX1-TMEM8B NFX1 chr9 33354892 + TMEM8B chr9 35845975 + Exonic hg38 LUSC TCGA-22-4604-01A 4 8 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 94794 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC9A9-KCNAB1 SLC9A9 chr3 143795001 - KCNAB1 chr3 156421616 + Exonic hg38 LUSC TCGA-22-4604-01A 3 7 In-Frame Intra-chr q24 q25.31 Seq+ 94795 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTSL2-MAPKAP1 ADAMTSL2 chr9 133541001 + MAPKAP1 chr9 125506417 - Exonic hg38 LUSC TCGA-22-4604-01A 1 11 In-Frame Intra-chr q34.2 q33.3 Seq+ 94796 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO32-ANXA13 FBXO32 chr8 123540899 - ANXA13 chr8 123702736 - Exonic hg38 LUSC TCGA-22-4605-01A 1 2 Out-of-frame Intra-chr q24.13 Tumor suppressor gene q24.13 Seq+ 94797 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806934 + TACC3 chr4 1735273 + Exonic hg38 LUSC TCGA-22-4607-01A 14 282 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 94798 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPDYA-BRE SPDYA chr2 28783978 + BRE chr2 28237202 + Exonic hg38 LUSC TCGA-22-4607-01A 5 30 Out-of-frame Intra-chr p23.2 Seq+ 94799 ChimerSeq TCGA FAWG TCGA_RNA-Seq F11R-NR1I3 F11R chr1 161021010 - NR1I3 chr1 161232946 - Exonic hg38 LUSC TCGA-22-4607-01A 2 5 Out-of-frame Intra-chr q23.3 q23.3 Transcription factor Seq+ 94800 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS7-SLC16A5 MRPS7 chr17 75263507 + SLC16A5 chr17 75100007 + Exonic hg38 LUSC TCGA-22-4607-01A 1 7 Out-of-frame Intra-chr q25.1 q25.1 94801 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHB-PAX5 SHB chr9 38016011 - PAX5 chr9 37020801 - Exonic hg38 LUSC TCGA-22-4609-01A 29 154 In-Frame Intra-chr p13.1 p13.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 94802 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF38-SPINK4 RNF38 chr9 36424613 - SPINK4 chr9 33245112 + Exonic hg38 LUSC TCGA-22-4609-01A 8 21 5'UTR-CDS Intra-chr p13.2 p13.3 94803 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPOP-SLC35B1 SPOP chr17 49607250 - SLC35B1 chr17 49704226 - Exonic hg38 LUSC TCGA-22-4613-01A 6 29 In-Frame Intra-chr q21.33 Oncogene Tumor suppressor gene q21.33 Seq+ 94804 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLAA-LINGO2 PLAA chr9 26935013 - LINGO2 chr9 27950706 - Exonic hg38 LUSC TCGA-22-4613-01A 2 16 CDS-5'UTR Intra-chr p21.2 p21.1 Seq+ 94805 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXNRD1-UGT2B27P TXNRD1 chr12 104315896 + UGT2B27P chr4 69005135 - Exonic hg38 LUSC TCGA-22-4613-01A 2 13 Out-of-frame Inter-chr q23.3 94806 ChimerSeq TCGA FAWG TCGA_RNA-Seq THOC5-SPATA16 THOC5 chr22 29539330 - SPATA16 chr3 173019575 - Exonic hg38 LUSC TCGA-22-4613-01A 3 4 In-Frame Inter-chr q12.2 q26.31 Seq+ 94807 ChimerSeq TCGA FAWG TCGA_RNA-Seq LSM14A-URI1 LSM14A chr19 34172763 + URI1 chr19 29971193 + Exonic hg38 LUSC TCGA-22-5471-01A 2 9 3'UTR-CDS Intra-chr q12 Seq+ 94808 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC13-UBA5 DNAJC13 chr3 132496663 + UBA5 chr3 132668818 + Exonic hg38 LUSC TCGA-22-5471-01A 2 3 Out-of-frame Intra-chr q22.1 q22.1 94809 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFRC-CPA3 TFRC chr3 196060180 - CPA3 chr3 148896520 + Exonic hg38 LUSC TCGA-22-5474-01A 15 64 Out-of-frame Intra-chr q29 q24 Seq+ 94810 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-EXT1 PVT1 chr8 127794734 + EXT1 chr8 117837201 - Exonic hg38 LUSC TCGA-22-5474-01A 5 49 5'UTR-CDS Intra-chr q24.21 q24.11 Oncogene Tumor suppressor gene Seq+ 94811 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIKFYVE-ZNF124 PIKFYVE chr2 208277708 + ZNF124 chr1 247159813 - Exonic hg38 LUSC TCGA-22-5474-01A 4 11 Out-of-frame Inter-chr q34 q44 Transcription factor Seq+ 94812 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIKFYVE-NHEJ1 PIKFYVE chr2 208277708 + NHEJ1 chr2 219095355 - Exonic hg38 LUSC TCGA-22-5474-01A 3 5 Out-of-frame Intra-chr q34 q35 94813 ChimerSeq TCGA FAWG TCGA_RNA-Seq NHEJ1-ZNF124 NHEJ1 chr2 219095274 - ZNF124 chr1 247159813 - Exonic hg38 LUSC TCGA-22-5474-01A 2 5 Out-of-frame Inter-chr q35 q44 Transcription factor 94814 ChimerSeq TCGA FAWG TCGA_RNA-Seq COBLL1-SMYD3 COBLL1 chr2 164841156 - SMYD3 chr1 245929937 - Exonic hg38 LUSC TCGA-22-5474-01A 2 3 Out-of-frame Inter-chr q24.3 q44 Transcription factor Seq+ 94815 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYBBP1A-ANKFY1 MYBBP1A chr17 4553810 - ANKFY1 chr17 4164173 - Exonic hg38 LUSC TCGA-22-5477-01A 161 544 CDS-3'UTR Intra-chr p13.2 Tumor suppressor gene p13.2 Seq+ 94816 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITCH-HM13 ITCH chr20 34477812 + HM13 chr20 31538241 + Exonic hg38 LUSC TCGA-22-5477-01A 12 22 Out-of-frame Intra-chr q11.22 q11.21 Seq+ 94817 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITPR1-SUMF1 ITPR1 chr3 4494506 + SUMF1 chr3 4068745 - Exonic hg38 LUSC TCGA-22-5477-01A 3 7 5'UTR-3'UTR Intra-chr p26.1 p26.1 Seq+ 94818 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF8-SSBP4 ZNF8 chr19 58279147 + SSBP4 chr19 18427351 + Exonic hg38 LUSC TCGA-22-5478-01A 56 261 Out-of-frame Intra-chr q13.43 Transcription factor p13.11 Seq+ 94819 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATAD2A-RPL28 GATAD2A chr19 19406019 + RPL28 chr19 55386350 + Exonic hg38 LUSC TCGA-22-5478-01A 3 25 5'UTR-5'UTR Intra-chr p13.11 Transcription factor q13.42 Seq+ 94820 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLOCK-SRD5A3 CLOCK chr4 55442432 - SRD5A3 chr4 55359346 + Exonic hg38 LUSC TCGA-22-5478-01A 3 14 In-Frame Intra-chr q12 Transcription factor q12 Seq+ 94821 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRTC1-LYPD4 CRTC1 chr19 18749875 + LYPD4 chr19 41839024 - Exonic hg38 LUSC TCGA-22-5478-01A 1 16 In-Frame Intra-chr p13.11 Oncogene q13.2 Seq+ 94822 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM33-CDK14 RBM33 chr7 155774647 + CDK14 chr7 90984148 + Exonic hg38 LUSC TCGA-22-5478-01A 3 7 In-Frame Intra-chr q36.3 q21.13 Seq+ 94823 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHCTF1-TFB2M AHCTF1 chr1 246842694 - TFB2M chr1 246566059 - Exonic hg38 LUSC TCGA-22-5479-01A 3 7 Out-of-frame Intra-chr q44 Transcription factor q44 Seq+ 94824 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACAP2-XXYLT1 ACAP2 chr3 195381009 - XXYLT1 chr3 195070111 - Exonic hg38 LUSC TCGA-22-5479-01A 2 8 Out-of-frame Intra-chr q29 q29 Seq+ 94825 ChimerSeq TCGA FAWG TCGA_RNA-Seq MZF1-CCDC105 MZF1 chr19 58569277 - CCDC105 chr19 15020461 + Exonic hg38 LUSC TCGA-22-5479-01A 1 8 Out-of-frame Intra-chr q13.43 Transcription factor p13.12 Seq+ 94826 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAG4-FGFR1 BAG4 chr8 38192795 + FGFR1 chr8 38426245 - Exonic hg38 LUSC TCGA-22-5480-01A 8 58 In-Frame Intra-chr p11.23 p11.23 TK:FGFR Oncogene KB Pub Seq+ 94827 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUX1-AHCYL2 CUX1 chr7 101816093 + AHCYL2 chr7 129379641 + Exonic hg38 LUSC TCGA-22-5480-01A 5 30 In-Frame Intra-chr q22.1 Tumor suppressor gene Transcription factor q32.1 Seq+ 94828 ChimerSeq TCGA FAWG TCGA_RNA-Seq STKLD1-DBH STKLD1 chr9 133379122 + DBH chr9 133651634 + Exonic hg38 LUSC TCGA-22-5480-01A 6 26 3'UTR-CDS Intra-chr q34.2 94829 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASAL2-LIMK2 RASAL2 chr1 178094694 + LIMK2 chr22 31278297 + Exonic hg38 LUSC TCGA-22-5480-01A 1 11 Out-of-frame Inter-chr q25.2 Tumor suppressor gene q12.2 TKL:LISK 94830 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR1-LETM2 FGFR1 chr8 38467981 - LETM2 chr8 38387950 + Exonic hg38 LUSC TCGA-22-5480-01A 1 4 5'UTR-5'UTR Intra-chr p11.23 TK:FGFR Oncogene p11.23 94831 ChimerSeq TCGA FAWG TCGA_RNA-Seq MANBA-LIMCH1 MANBA chr4 102760718 - LIMCH1 chr4 41598920 + Exonic hg38 LUSC TCGA-22-5481-01A 5 26 In-Frame Intra-chr q24 p13 Seq+ 94832 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGSF11-IGKJ1 IGSF11 chr3 118928670 - IGKJ1 chr2 88861917 - Exonic hg38 LUSC TCGA-22-5481-01A 9 0 Out-of-frame Inter-chr q13.32 p11.2 Seq+ 94833 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPHOSPH9-CDC6 MPHOSPH9 chr12 123233075 - CDC6 chr17 40291469 + Exonic hg38 LUSC TCGA-22-5481-01A 3 21 3'UTR-3'UTR Inter-chr q24.31 q21.2 Seq+ 94834 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP32-EPHA1 USP32 chr17 60391882 - EPHA1 chr7 143397657 - Exonic hg38 LUSC TCGA-22-5481-01A 4 12 CDS-5'UTR Inter-chr q23.2 q35 Tumor suppressor gene Seq+ 94835 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-SLC46A1 NF1 chr17 31182665 + SLC46A1 chr17 28405997 - Exonic hg38 LUSC TCGA-22-5482-01A 3 16 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 94836 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP1B-HECW2 LRP1B chr2 141810279 - HECW2 chr2 196343764 - Exonic hg38 LUSC TCGA-22-5482-01A 2 11 In-Frame Intra-chr q22.2 Oncogene Tumor suppressor gene q32.3 Seq+ 94837 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCA13-CAP1 ABCA13 chr7 48219477 + CAP1 chr1 40072253 + Exonic hg38 LUSC TCGA-22-5482-01A 1000 1000 Out-of-frame Inter-chr p12.3 p34.2 94838 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALG1-SEC14L5 ALG1 chr16 5075536 + SEC14L5 chr16 5014859 + Exonic hg38 LUSC TCGA-22-5483-01A 2 13 In-Frame Intra-chr p13.3 p13.3 Seq+ 94839 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNK2-SECISBP2 WNK2 chr9 93264033 + SECISBP2 chr9 89357411 + Exonic hg38 LUSC TCGA-22-5483-01A 3 4 Out-of-frame Intra-chr q22.31 Tumor suppressor gene q22.2 Seq+ 94840 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCND3-BYSL CCND3 chr6 41940370 - BYSL chr6 41927374 + Exonic hg38 LUSC TCGA-22-5483-01A 1 9 Out-of-frame Intra-chr p21.1 p21.1 94841 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC7A1-ARHGAP35 SLC7A1 chr13 29586725 - ARHGAP35 chr19 46937264 + Exonic hg38 LUSC TCGA-22-5483-01A 1 6 5'UTR-CDS Inter-chr q12.3 q13.32 Transcription factor 94842 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF3-CDH20 ATF3 chr1 212618234 + CDH20 chr18 61490402 + Exonic hg38 LUSC TCGA-22-5483-01A 1 3 CDS-5'UTR Inter-chr q32.3 Tumor suppressor gene Transcription factor q21.33 Oncogene Seq+ 94843 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLCO3A1-BMPR2 SLCO3A1 chr15 91854088 + BMPR2 chr2 202542311 + Exonic hg38 LUSC TCGA-22-5485-01A 13 44 CDS-3'UTR Inter-chr q26.1 q33.1 TKL:STKR Tumor suppressor gene Seq+ 94844 ChimerSeq TCGA FAWG TCGA_RNA-Seq COBLL1-SCN3A COBLL1 chr2 164743687 - SCN3A chr2 165186747 - Exonic hg38 LUSC TCGA-22-5485-01A 2 12 CDS-5'UTR Intra-chr q24.3 q24.3 Seq+ 94845 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM94-NUP85 TMEM94 chr17 75471929 + NUP85 chr17 75208527 + Exonic hg38 LUSC TCGA-22-5485-01A 2 11 In-Frame Intra-chr q25.1 q25.1 94846 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHMP7-IGHJ6 CHMP7 chr8 23243735 + IGHJ6 chr14 105863240 - Exonic hg38 LUSC TCGA-22-5489-01A 59 1 Out-of-frame Inter-chr p21.3 94847 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZCCHC7-LRRC19 ZCCHC7 chr9 37126942 + LRRC19 chr9 26995849 - Exonic hg38 LUSC TCGA-22-5489-01A 15 25 In-Frame Intra-chr p13.2 p21.2 Seq+ 94848 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC19-SNAPC3 LRRC19 chr9 26996311 - SNAPC3 chr9 15453041 + Exonic hg38 LUSC TCGA-22-5489-01A 6 18 Out-of-frame Intra-chr p21.2 p22.3 Seq+ 94849 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNAPC3-LRRC19 SNAPC3 chr9 15451402 + LRRC19 chr9 26999703 - Exonic hg38 LUSC TCGA-22-5489-01A 2 11 5'UTR-5'UTR Intra-chr p22.3 p21.2 94850 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRYBG3-IL20RB CRYBG3 chr3 97881219 + IL20RB chr3 137010113 + Exonic hg38 LUSC TCGA-22-5489-01A 1 7 In-Frame Intra-chr q11.2 q22.3 Seq+ 94851 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF7L2-CASC2 TCF7L2 chr10 113040126 + CASC2 chr10 118206522 + Exonic hg38 LUSC TCGA-22-5491-01A 6 22 CDS-5'UTR Intra-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q26.11 Tumor suppressor gene Seq+ 94852 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPP-GOLIM4 LPP chr3 188225527 + GOLIM4 chr3 168048365 - Exonic hg38 LUSC TCGA-22-5491-01A 4 5 5'UTR-CDS Intra-chr q27.3 Oncogene q26.2 Seq+ 94853 ChimerSeq TCGA FAWG TCGA_RNA-Seq CH17-FKBP5 CH17 chr9 61331052 + FKBP5 chr6 35642843 - Exonic hg38 LUSC TCGA-22-5491-01A 3 8 Out-of-frame Inter-chr p21.31 94854 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL29-UBXN2A KLHL29 chr2 23642850 + UBXN2A chr2 23958301 + Exonic hg38 LUSC TCGA-22-5491-01A 2 11 CDS-5'UTR Intra-chr p24.1 p23.3 94855 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL1RAP-TMEM207 IL1RAP chr3 190609181 + TMEM207 chr3 190447827 - Exonic hg38 LUSC TCGA-22-5491-01A 1 8 In-Frame Intra-chr q28 q28 Seq+ 94856 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTR2-TSGA10 ACTR2 chr2 65227957 + TSGA10 chr2 99105697 - Exonic hg38 LUSC TCGA-22-5492-01A 17 42 In-Frame Intra-chr p14 TKL:STKR q11.2 Seq+ 94857 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA3C-CD36 SEMA3C chr7 80916679 - CD36 chr7 80486467 + Exonic hg38 LUSC TCGA-22-5492-01A 1 29 5'UTR-5'UTR Intra-chr q21.11 q21.11 Seq+ 94858 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIMCH1-OCIAD2 LIMCH1 chr4 41360936 + OCIAD2 chr4 48904611 - Exonic hg38 LUSC TCGA-22-A5C4-01A 47 218 CDS-5'UTR Intra-chr p13 p11 Seq+ 94859 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCR-MYH11 BCR chr22 23295155 + MYH11 chr16 15786732 - Exonic hg38 LUSC TCGA-22-A5C4-01A 31 85 CDS-5'UTR Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene Oncogene Seq+ 94860 ChimerSeq TCGA FAWG TCGA_RNA-Seq AAK1-WFDC13 AAK1 chr2 69505569 - WFDC13 chr20 45704444 + Exonic hg38 LUSC TCGA-22-A5C4-01A 18 57 In-Frame Inter-chr p13.3 Other:NAK q13.12 Seq+ 94861 ChimerSeq TCGA FAWG TCGA_RNA-Seq STIM2-GATAD2A STIM2 chr4 26919634 + GATAD2A chr19 19465340 + Exonic hg38 LUSC TCGA-22-A5C4-01A 14 57 CDS-5'UTR Inter-chr p15.2 p13.11 Transcription factor Seq+ 94862 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACSS1-DBNDD2 ACSS1 chr20 25057769 - DBNDD2 chr20 45408460 + Exonic hg38 LUSC TCGA-22-A5C4-01A 10 28 CDS-5'UTR Intra-chr p11.21 q13.12 Seq+ 94863 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAGED1-CYP4F2 MAGED1 chrX 51900296 + CYP4F2 chr19 15892582 - Exonic hg38 LUSC TCGA-22-A5C4-01A 5 38 CDS-5'UTR Inter-chr p11.22 p13.12 Seq+ 94864 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRA-SDAD1 PTPRA chr20 3038129 + SDAD1 chr4 75957941 - Exonic hg38 LUSC TCGA-22-A5C4-01A 8 21 Out-of-frame Inter-chr p13 q21.1 Seq+ 94865 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCB1-MCM8 PLCB1 chr20 8722421 + MCM8 chr20 5957126 + Exonic hg38 LUSC TCGA-22-A5C4-01A 2 38 In-Frame Intra-chr p12.3 p12.3 Seq+ 94866 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKKS-MMP24 MKKS chr20 10434108 - MMP24 chr20 35246840 + Exonic hg38 LUSC TCGA-22-A5C4-01A 7 10 5'UTR-CDS Intra-chr p12.2 q11.22 Seq+ 94867 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNY-VWA3B CCNY chr10 35501535 + VWA3B chr2 98290511 + Exonic hg38 LUSC TCGA-22-A5C4-01A 5 16 In-Frame Inter-chr p11.21 q11.2 Seq+ 94868 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAHD2B-DROSHA FAHD2B chr2 97090109 - DROSHA chr5 31406945 - Exonic hg38 LUSC TCGA-22-A5C4-01A 1 24 Out-of-frame Inter-chr q11.2 p13.3 Seq+ 94869 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK32B-SMIM14 STK32B chr4 5139960 + SMIM14 chr4 39605180 - Exonic hg38 LUSC TCGA-22-A5C4-01A 3 16 5'UTR-5'UTR Intra-chr p16.2 p14 Seq+ 94870 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCB1-RBL1 PLCB1 chr20 8150371 + RBL1 chr20 37022826 - Exonic hg38 LUSC TCGA-22-A5C4-01A 2 17 In-Frame Intra-chr p12.3 q11.23 Tumor suppressor gene Seq+ 94871 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCRN1-WIPF3 SCRN1 chr7 29989642 - WIPF3 chr7 29914493 + Exonic hg38 LUSC TCGA-22-A5C4-01A 1 14 5'UTR-CDS Intra-chr p14.3 p14.3 Seq+ 94872 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK11B-DMD CDK11B chr1 1641662 - DMD chrX 31836819 - Exonic hg38 LUSC TCGA-22-A5C4-01A 1 11 Out-of-frame Inter-chr p36.33 p21.1 Tumor suppressor gene 94873 ChimerSeq TCGA FAWG TCGA_RNA-Seq CXorf23-POLA1 CXorf23 chrX 19914152 - POLA1 chrX 24809898 + Exonic hg38 LUSC TCGA-22-A5C4-01A 2 7 Out-of-frame Intra-chr p22.12 p22.11 Seq+ 94874 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL17RA-SCARF2 IL17RA chr22 17085229 + SCARF2 chr22 20429833 - Exonic hg38 LUSC TCGA-22-A5C4-01A 2 5 Out-of-frame Intra-chr q11.1 q11.21 Seq+ 94875 ChimerSeq TCGA FAWG TCGA_RNA-Seq YDJC-CLEC16A YDJC chr22 21629308 - CLEC16A chr16 11060902 + Exonic hg38 LUSC TCGA-22-A5C4-01A 1 9 Out-of-frame Inter-chr q11.21 p13.13 94876 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASC20-OSER1 CASC20 chr20 6473655 + OSER1 chr20 44206998 - Exonic hg38 LUSC TCGA-22-A5C4-01A 1 8 5'UTR-5'UTR Intra-chr p12.3 q13.12 94877 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM227B-FGF7 FAM227B chr15 49371302 - FGF7 chr15 49424032 + Exonic hg38 LUSC TCGA-22-A5C4-01A 1 8 CDS-5'UTR Intra-chr q21.2 q21.2 94878 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF24-MMP24 RNF24 chr20 4015437 - MMP24 chr20 35246840 + Exonic hg38 LUSC TCGA-22-A5C4-01A 2 4 5'UTR-CDS Intra-chr p13 q11.22 94879 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACROD2-UBOX5 MACROD2 chr20 14002404 + UBOX5 chr20 3123406 - Exonic hg38 LUSC TCGA-22-A5C4-01A 1 4 CDS-5'UTR Intra-chr p12.1 p13 Seq+ 94880 ChimerSeq TCGA FAWG TCGA_RNA-Seq DRG1-MYO18B DRG1 chr22 31403204 + MYO18B chr22 25921257 + Exonic hg38 LUSC TCGA-33-4532-01A 57 175 In-Frame Intra-chr q12.2 Tumor suppressor gene q12.1 Tumor suppressor gene Seq+ 94881 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS17-CERS3 ADAMTS17 chr15 100152612 - CERS3 chr15 100402865 - Exonic hg38 LUSC TCGA-33-4532-01A 6 46 In-Frame Intra-chr q26.3 q26.3 Seq+ 94882 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANSL1-UNC45B KANSL1 chr17 46170855 - UNC45B chr17 35180559 + Exonic hg38 LUSC TCGA-33-4532-01A 8 22 5'UTR-CDS Intra-chr q12 Seq+ 94883 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC148-ACTR3 CCDC148 chr2 158456415 - ACTR3 chr2 113927345 + Exonic hg38 LUSC TCGA-33-4532-01A 1 16 Out-of-frame Intra-chr q24.1 q14.1 94884 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAI1-IFT20 RAI1 chr17 17724159 + IFT20 chr17 28331987 - Exonic hg38 LUSC TCGA-33-4533-01A 27 292 5'UTR-5'UTR Intra-chr p11.2 q11.2 Seq+ 94885 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCY9-PRKCB ADCY9 chr16 4113750 - PRKCB chr16 23988508 + Exonic hg38 LUSC TCGA-33-4533-01A 3 24 In-Frame Intra-chr p13.3 p12.2 Tumor suppressor gene Seq+ 94886 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAALADL2-ABCC5 NAALADL2 chr3 175627386 + ABCC5 chr3 183925719 - Exonic hg38 LUSC TCGA-33-4538-01A 34 95 In-Frame Intra-chr q26.31 q27.1 Seq+ 94887 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAM23-CERKL ADAM23 chr2 206560118 + CERKL chr2 181617421 - Exonic hg38 LUSC TCGA-33-4538-01A 16 71 CDS-3'UTR Intra-chr q33.3 q31.3 Seq+ 94888 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD82-TSPAN18 CD82 chr11 44605429 + TSPAN18 chr11 44764426 + Exonic hg38 LUSC TCGA-33-4538-01A 2 5 CDS-5'UTR Intra-chr p11.2 Tumor suppressor gene p11.2 94889 ChimerSeq TCGA FAWG TCGA_RNA-Seq U2AF2-NLRP9 U2AF2 chr19 55669692 + NLRP9 chr19 55709044 - Exonic hg38 LUSC TCGA-33-4547-01A 81 222 Out-of-frame Intra-chr q13.42 q13.42 Seq+ 94890 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRF1-MTMR1 NRF1 chr7 129611824 + MTMR1 chrX 150750730 + Exonic hg38 LUSC TCGA-33-4547-01A 5 22 5'UTR-5'UTR Inter-chr q32.2 Tumor suppressor gene Transcription factor q28 Seq+ 94891 ChimerSeq TCGA FAWG TCGA_RNA-Seq DEDD2-GSK3A DEDD2 chr19 42220074 - GSK3A chr19 42233383 - Exonic hg38 LUSC TCGA-33-4547-01A 2 1 5'UTR-CDS Intra-chr q13.2 q13.2 CMGC:GSK 94892 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERINC2-ZCCHC17 SERINC2 chr1 31413304 + ZCCHC17 chr1 31363848 + Exonic hg38 LUSC TCGA-33-4566-01A 17 17 Out-of-frame Intra-chr p35.2 p35.2 Seq+ 94893 ChimerSeq TCGA FAWG TCGA_RNA-Seq LITAF-CXCL17 LITAF chr16 11587151 - CXCL17 chr19 42433856 - Exonic hg38 LUSC TCGA-33-4566-01A 5 11 5'UTR-CDS Inter-chr p13.13 Tumor suppressor gene q13.2 Seq+ 94894 ChimerSeq TCGA FAWG TCGA_RNA-Seq HN1L-SLC9A3R2 HN1L chr16 1678356 + SLC9A3R2 chr16 2029582 + Exonic hg38 LUSC TCGA-33-4566-01A 1 3 Out-of-frame Intra-chr p13.3 94895 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLDC1-CYBA TLDC1 chr16 84482592 - CYBA chr16 88643571 - Exonic hg38 LUSC TCGA-33-4582-01A 11 37 Out-of-frame Intra-chr q24.1 q24.2 Seq+ 94896 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKDC-PRIM2 PRKDC chr8 47912410 - PRIM2 chr6 57379901 + Exonic hg38 LUSC TCGA-33-4582-01A 4 39 In-Frame Inter-chr q11.21 Oncogene p11.2 Seq+ 94897 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRYBB2P1-BCR CRYBB2P1 chr22 25457401 + BCR chr22 23253799 + Exonic hg38 LUSC TCGA-33-4582-01A 2 10 5'UTR-CDS Intra-chr q11.23 q11.23 Atypical:BCR Oncogene Tumor suppressor gene 94898 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC1-SKIDA1 DNAJC1 chr10 21918779 - SKIDA1 chr10 21523871 - Exonic hg38 LUSC TCGA-33-4583-01A 2 7 CDS-5'UTR Intra-chr p12.31 p12.31 Seq+ 94899 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD8-POLA2 FRMD8 chr11 65389528 + POLA2 chr11 65282479 + Exonic hg38 LUSC TCGA-33-4586-01A 3 13 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 94900 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTRH2-RNFT1 PTRH2 chr17 59707371 - RNFT1 chr17 59958444 - Exonic hg38 LUSC TCGA-33-4586-01A 2 11 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 94901 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREBBP-PRSS33 CREBBP chr16 3879832 - PRSS33 chr16 2786121 - Exonic hg38 LUSC TCGA-33-4587-01A 23 150 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 94902 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACF1-INPP5B MACF1 chr1 39455097 + INPP5B chr1 37887004 - Exonic hg38 LUSC TCGA-33-4587-01A 16 109 In-Frame Intra-chr p34.3 p34.3 Seq+ 94903 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACF1-RHBDL2 MACF1 chr1 39105717 + RHBDL2 chr1 38919337 - Exonic hg38 LUSC TCGA-33-4587-01A 3 48 CDS-5'UTR Intra-chr p34.3 p34.3 Seq+ 94904 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREBBP-ELOB CREBBP chr16 3879832 - ELOB chr16 2777127 - Exonic hg38 LUSC TCGA-33-4587-01A 5 29 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 94905 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKAL1-ASH1L CDKAL1 chr6 20846178 + ASH1L chr1 155380116 - Exonic hg38 LUSC TCGA-33-4587-01A 5 20 In-Frame Inter-chr p22.3 q22 Transcription factor Seq+ 94906 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO42-CBARP FBXO42 chr1 16255711 - CBARP chr19 1231275 - Exonic hg38 LUSC TCGA-33-4587-01A 6 16 Out-of-frame Inter-chr p36.13 p13.3 94907 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGF2BP3-PRKCA IGF2BP3 chr7 23342064 - PRKCA chr17 66641355 + Exonic hg38 LUSC TCGA-33-4587-01A 5 16 In-Frame Inter-chr p15.3 q24.2 Seq+ 94908 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCA-IGF2BP3 PRKCA chr17 66496283 + IGF2BP3 chr7 23319254 - Exonic hg38 LUSC TCGA-33-4587-01A 2 17 In-Frame Inter-chr q24.2 p15.3 Seq+ 94909 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARRB1-UVRAG ARRB1 chr11 75351588 - UVRAG chr11 75888829 + Exonic hg38 LUSC TCGA-33-4587-01A 5 3 Out-of-frame Intra-chr q13.4 q13.5 Tumor suppressor gene Seq+ 94910 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERGIC1-RANBP17 ERGIC1 chr5 172914838 + RANBP17 chr5 171293883 + Exonic hg38 LUSC TCGA-33-6737-01A 241 1164 In-Frame Intra-chr q35.1 q35.1 Seq+ 94911 ChimerSeq TCGA FAWG TCGA_RNA-Seq NKAIN2-MS4A12 NKAIN2 chr6 124658386 + MS4A12 chr11 60497313 + Exonic hg38 LUSC TCGA-33-6737-01A 18 85 CDS-5'UTR Inter-chr q22.31 q12.2 Seq+ 94912 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDH3A1-MYH9 ALDH3A1 chr17 19748259 - MYH9 chr22 36327488 - Exonic hg38 LUSC TCGA-33-6737-01A 12 22 5'UTR-CDS Inter-chr p11.2 q12.3 Oncogene Tumor suppressor gene Seq+ 94913 ChimerSeq TCGA FAWG TCGA_RNA-Seq APOL2-ULK2 APOL2 chr22 36231340 - ULK2 chr17 19826186 - Exonic hg38 LUSC TCGA-33-6737-01A 3 32 Out-of-frame Inter-chr q12.3 p11.2 Other:ULK Seq+ 94914 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKIB-HDDC2 PKIB chr6 122472041 + HDDC2 chr6 125300659 - Exonic hg38 LUSC TCGA-33-6737-01A 2 12 5'UTR-CDS Intra-chr q22.31 q22.31 94915 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERINC1-NKAIN2 SERINC1 chr6 122451664 - NKAIN2 chr6 124355267 + Exonic hg38 LUSC TCGA-33-6737-01A 2 8 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 94916 ChimerSeq TCGA FAWG TCGA_RNA-Seq HINT3-WDR70 HINT3 chr6 125967004 + WDR70 chr5 37516514 + Exonic hg38 LUSC TCGA-33-6737-01A 2 7 Out-of-frame Inter-chr q22.32 p13.2 94917 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKIB-TRDN PKIB chr6 122633367 + TRDN chr6 123530565 - Exonic hg38 LUSC TCGA-33-6737-01A 1 10 5'UTR-CDS Intra-chr q22.31 q22.31 94918 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF217-HDDC2 RNF217 chr6 124963426 + HDDC2 chr6 125300659 - Exonic hg38 LUSC TCGA-33-6737-01A 1 3 In-Frame Intra-chr q22.31 q22.31 94919 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB9A-EGFL6 RAB9A chrX 13689288 + EGFL6 chrX 13617730 + Exonic hg38 LUSC TCGA-33-6738-01A 12 29 5'UTR-CDS Intra-chr p22.2 p22.2 Seq+ 94920 ChimerSeq TCGA FAWG TCGA_RNA-Seq LSM1-NSD3 LSM1 chr8 38176275 - NSD3 chr8 38338607 - Exonic hg38 LUSC TCGA-33-6738-01A 5 20 Out-of-frame Intra-chr p11.23 p11.23 Tumor suppressor gene 94921 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERGIC1-RANBP17 ERGIC1 chr5 172914838 + RANBP17 chr5 171293883 + Exonic hg38 LUSC TCGA-33-6738-01A 2 6 In-Frame Intra-chr q35.1 q35.1 Seq+ 94922 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRP1-PDXK RRP1 chr21 43798100 + PDXK chr21 43746079 + Exonic hg38 LUSC TCGA-33-6738-01A 1 6 In-Frame Intra-chr q22.3 q22.3 94923 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH2-CWH43 NOTCH2 chr1 119963574 - CWH43 chr4 49030825 + Exonic hg38 LUSC TCGA-33-A4WN-01A 4 9 In-Frame Inter-chr p12 Oncogene Tumor suppressor gene p11 Seq+ 94924 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEKT4P2-TMEM211 TEKT4P2 chr21 9127489 - TMEM211 chr22 24939451 - Exonic hg38 LUSC TCGA-33-AAS8-01A 2 13 3'UTR-5'UTR Inter-chr p11.2 q11.23 94925 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXNRD1-GLT8D2 TXNRD1 chr12 104289040 + GLT8D2 chr12 104021491 - Exonic hg38 LUSC TCGA-33-AASB-01A 183 1387 5'UTR-5'UTR Intra-chr q23.3 q23.3 Seq+ 94926 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNL3-MANF GNL3 chr3 52686105 + MANF chr3 51386208 + Exonic hg38 LUSC TCGA-33-AASB-01A 16 93 In-Frame Intra-chr p21.1 p21.2 Seq+ 94927 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRIP3-ST5 NRIP3 chr11 9003762 - ST5 chr11 8811335 - Exonic hg38 LUSC TCGA-33-AASB-01A 1 3 CDS-5'UTR Intra-chr p15.4 p15.4 Tumor suppressor gene 94928 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNS4-CCR7 TNS4 chr17 40484484 - CCR7 chr17 40558942 - Exonic hg38 LUSC TCGA-33-AASI-01A 61 222 In-Frame Intra-chr q21.2 q21.2 Seq+ 94929 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA1-BTBD16 PLEKHA1 chr10 122400388 + BTBD16 chr10 122289909 + Exonic hg38 LUSC TCGA-33-AASJ-01A 7 77 In-Frame Intra-chr q26.13 q26.13 Seq+ 94930 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMD12-CASC8 SAMD12 chr8 118379560 - CASC8 chr8 127290060 - Exonic hg38 LUSC TCGA-33-AASJ-01A 9 40 3'UTR-3'UTR Intra-chr q24.12 q24.21 Seq+ 94931 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAP-CASC21 SCAP chr3 47442872 - CASC21 chr8 127339281 + Exonic hg38 LUSC TCGA-33-AASJ-01A 3 5 5'UTR-5'UTR Inter-chr p21.31 q24.21 94932 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP1B3-GRK7 ATP1B3 chr3 141916020 + GRK7 chr3 141816714 + Exonic hg38 LUSC TCGA-33-AASJ-01A 1 2 Out-of-frame Intra-chr q23 q23 Seq+ 94933 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA4-CD96 NCOA4 chr10 46030526 - CD96 chr3 111364513 + Exonic hg38 LUSC TCGA-33-AASL-01A 15 37 5'UTR-5'UTR Inter-chr q11.22 Oncogene Tumor suppressor gene q13.13 Seq+ 94934 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPR1-MR1 XPR1 chr1 180632270 + MR1 chr1 181050011 + Exonic hg38 LUSC TCGA-33-AASL-01A 3 19 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 94935 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLBD1-RPL30P11 PLBD1 chr12 14535659 - RPL30P11 chr12 14357586 - Exonic hg38 LUSC TCGA-33-AASL-01A 5 10 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 94936 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSD4-IL1RN PSD4 chr2 113157535 + IL1RN chr2 113111116 + Exonic hg38 LUSC TCGA-34-2600-01A 9 20 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 94937 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN9-IGKJ2 PTPN9 chr15 75463462 - IGKJ2 chr2 88861556 - Exonic hg38 LUSC TCGA-34-2608-01A 20 1 Out-of-frame Inter-chr q24.2 p11.2 94938 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806934 + TACC3 chr4 1739702 + Exonic hg38 LUSC TCGA-34-2608-01A 11 25 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 94939 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHJ1-LINGO3 PLEKHJ1 chr19 2235459 - LINGO3 chr19 2290586 - Exonic hg38 LUSC TCGA-34-5231-01A 8 30 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 94940 ChimerSeq TCGA FAWG TCGA_RNA-Seq HECTD4-PEBP1 HECTD4 chr12 112306064 - PEBP1 chr12 118138039 + Exonic hg38 LUSC TCGA-34-5232-01A 15 77 In-Frame Intra-chr q24.13 q24.23 Tumor suppressor gene Seq+ 94941 ChimerSeq TCGA FAWG TCGA_RNA-Seq ULK1-FBXW8 ULK1 chr12 131919384 + FBXW8 chr12 117024147 + Exonic hg38 LUSC TCGA-34-5232-01A 8 40 In-Frame Intra-chr q24.33 Other:ULK q24.22 Seq+ 94942 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBRSL1-CKAP4 FBRSL1 chr12 132490861 + CKAP4 chr12 106276549 - Exonic hg38 LUSC TCGA-34-5232-01A 8 25 CDS-5'UTR Intra-chr q24.33 q23.3 Seq+ 94943 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOC4L-STAB2 NOC4L chr12 132148895 + STAB2 chr12 103748963 + Exonic hg38 LUSC TCGA-34-5232-01A 7 28 In-Frame Intra-chr q24.33 q23.3 Seq+ 94944 ChimerSeq TCGA FAWG TCGA_RNA-Seq APPL2-CIT APPL2 chr12 105235959 - CIT chr12 119761055 - Exonic hg38 LUSC TCGA-34-5232-01A 6 28 In-Frame Intra-chr q23.3 q24.23 Seq+ 94945 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2A2-EP400 ATP2A2 chr12 110292124 + EP400 chr12 131979697 + Exonic hg38 LUSC TCGA-34-5232-01A 4 15 In-Frame Intra-chr q24.11 q24.33 Oncogene Seq+ 94946 ChimerSeq TCGA FAWG TCGA_RNA-Seq CIT-FAM222A CIT chr12 119767087 - FAM222A chr12 109744101 + Exonic hg38 LUSC TCGA-34-5232-01A 3 14 CDS-5'UTR Intra-chr q24.23 q24.11 Seq+ 94947 ChimerSeq TCGA FAWG TCGA_RNA-Seq B3GALT2-CFH B3GALT2 chr1 193186019 - CFH chr1 196713735 + Exonic hg38 LUSC TCGA-34-5232-01A 1 14 5'UTR-CDS Intra-chr q31.2 q31.3 94948 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM222A-MSI1 FAM222A chr12 109714897 + MSI1 chr12 120364755 - Exonic hg38 LUSC TCGA-34-5232-01A 3 3 5'UTR-CDS Intra-chr q24.11 q24.31 94949 ChimerSeq TCGA FAWG TCGA_RNA-Seq PANX1-DEUP1 PANX1 chr11 94129493 + DEUP1 chr11 93437543 + Exonic hg38 LUSC TCGA-34-5236-01A 20 77 Out-of-frame Intra-chr q21 q21 94950 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH3-DEFB132 NOTCH3 chr19 15167249 - DEFB132 chr20 259077 + Exonic hg38 LUSC TCGA-34-5236-01A 7 50 In-Frame Inter-chr p13.12 Oncogene Tumor suppressor gene p13 Seq+ 94951 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFHX4-VRK1 ZFHX4 chr8 76708048 + VRK1 chr14 96931331 + Exonic hg38 LUSC TCGA-34-5236-01A 7 8 CDS-3'UTR Inter-chr q21.13 Transcription factor q32.2 CK1:VRK Seq+ 94952 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDH3A2-SLC47A1 ALDH3A2 chr17 19655387 + SLC47A1 chr17 19549635 + Exonic hg38 LUSC TCGA-34-5236-01A 3 12 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 94953 ChimerSeq TCGA FAWG TCGA_RNA-Seq SP3-STK39 SP3 chr2 173913070 - STK39 chr2 168182090 - Exonic hg38 LUSC TCGA-34-5236-01A 2 13 In-Frame Intra-chr q31.1 Transcription factor q24.3 Seq+ 94954 ChimerSeq TCGA FAWG TCGA_RNA-Seq KPNA4-IFT80 KPNA4 chr3 160565214 - IFT80 chr3 160384646 - Exonic hg38 LUSC TCGA-34-5236-01A 2 6 CDS-5'UTR Intra-chr q25.33 q25.33 Seq+ 94955 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC148-DAPL1 CCDC148 chr2 158456415 - DAPL1 chr2 158804282 + Exonic hg38 LUSC TCGA-34-5236-01A 1 3 In-Frame Intra-chr q24.1 q24.1 94956 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPHA4-COL4A3 EPHA4 chr2 221563731 - COL4A3 chr2 227237968 + Exonic hg38 LUSC TCGA-34-5236-01A 1 3 Out-of-frame Intra-chr q36.1 q36.3 Seq+ 94957 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM1-EIF4G3 PUM1 chr1 31059204 - EIF4G3 chr1 21002808 - Exonic hg38 LUSC TCGA-34-5239-01A 2 4 CDS-5'UTR Intra-chr p35.2 p36.12 Seq+ 94958 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANGAP1-FNTA RANGAP1 chr22 41285363 - FNTA chr8 43059092 + Exonic hg38 LUSC TCGA-34-5239-01A 1 1 5'UTR-CDS Inter-chr q13.2 p11.21 94959 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP2S1-UPF1 CYP2S1 chr19 41197928 + UPF1 chr19 18865289 + Exonic hg38 LUSC TCGA-34-5240-01A 2 4 In-Frame Intra-chr q13.2 p13.11 94960 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITPRIPL1-IL36G ITPRIPL1 chr2 96328117 + IL36G chr2 112984840 + Exonic hg38 LUSC TCGA-34-5241-01A 9 115 In-Frame Intra-chr q11.2 q14.1 Seq+ 94961 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTN4-APLP1 ACTN4 chr19 38647907 + APLP1 chr19 35869667 + Exonic hg38 LUSC TCGA-34-5241-01A 2 16 3'UTR-CDS Intra-chr q13.12 Seq+ 94962 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF430-GABRB1 ZNF430 chr19 21034184 + GABRB1 chr4 47031914 + Exonic hg38 LUSC TCGA-34-5241-01A 3 5 Out-of-frame Inter-chr Transcription factor p12 Seq+ 94963 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTN4-KIRREL2 ACTN4 chr19 38647907 + KIRREL2 chr19 35864648 + Exonic hg38 LUSC TCGA-34-5241-01A 1 12 3'UTR-CDS Intra-chr q13.12 94964 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC97-SIPA1L3 CCDC97 chr19 41310356 + SIPA1L3 chr19 38029089 + Exonic hg38 LUSC TCGA-34-5241-01A 2 6 CDS-5'UTR Intra-chr q13.2 q13.13 Seq+ 94965 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST6GAL1-TBCCD1 ST6GAL1 chr3 186963926 + TBCCD1 chr3 186564372 - Exonic hg38 LUSC TCGA-34-5241-01A 1 10 5'UTR-5'UTR Intra-chr q27.3 q27.3 Seq+ 94966 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP11-DGKH AKAP11 chr13 42286399 + DGKH chr13 42252409 + Exonic hg38 LUSC TCGA-34-5928-01A 14 39 CDS-5'UTR Intra-chr q14.11 q14.11 Seq+ 94967 ChimerSeq TCGA FAWG TCGA_RNA-Seq EZH2-AUTS2 EZH2 chr7 148846497 - AUTS2 chr7 70762870 + Exonic hg38 LUSC TCGA-34-5928-01A 3 48 Out-of-frame Intra-chr q36.1 Oncogene Tumor suppressor gene q11.22 Seq+ 94968 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRC2A-COL1A1 PRRC2A chr6 31635174 + COL1A1 chr17 50189908 - Exonic hg38 LUSC TCGA-34-5928-01A 3 10 Out-of-frame Inter-chr q21.33 Oncogene Seq+ 94969 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC28-EP300 TTC28 chr22 28629552 - EP300 chr22 41135813 + Exonic hg38 LUSC TCGA-34-5929-01A 2 3 Out-of-frame Intra-chr q12.1 q13.2 Oncogene Seq+ 94970 ChimerSeq TCGA FAWG TCGA_RNA-Seq TICAM1-NFIX TICAM1 chr19 4831614 - NFIX chr19 13073047 + Exonic hg38 LUSC TCGA-34-7107-01A 2 3 5'UTR-CDS Intra-chr p13.3 p13.13 Transcription factor 94971 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNB1-CALML6 GNB1 chr1 1890820 - CALML6 chr1 1916441 + Exonic hg38 LUSC TCGA-34-8454-01A 43 33 5'UTR-CDS Intra-chr p36.33 p36.33 Seq+ 94972 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIX-DNM2 NFIX chr19 12995864 + DNM2 chr19 10786564 + Exonic hg38 LUSC TCGA-34-8456-01A 5 5 In-Frame Intra-chr p13.13 Transcription factor p13.2 Seq+ 94973 ChimerSeq TCGA FAWG TCGA_RNA-Seq TULP3-GGNBP2 TULP3 chr12 2934561 + GGNBP2 chr17 36581344 + Exonic hg38 LUSC TCGA-34-8456-01A 3 6 CDS-3'UTR Inter-chr p13.33 Tumor suppressor gene Seq+ 94974 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCCC1-OT MCCC1 chr3 183094559 - OT chr3 181056697 + Exonic hg38 LUSC TCGA-34-8456-01A 1 8 Out-of-frame Intra-chr q27.1 94975 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC7B-TUNAR TTC7B chr14 90816175 - TUNAR chr14 95922781 + Exonic hg38 LUSC TCGA-34-8456-01A 2 3 5'UTR-5'UTR Intra-chr q32.11 q32.2 94976 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT18-ST5 GALNT18 chr11 11621359 - ST5 chr11 8750725 - Exonic hg38 LUSC TCGA-34-A5IX-01A 5 16 CDS-5'UTR Intra-chr p15.4 p15.4 Tumor suppressor gene Seq+ 94977 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNRF3-NF2 ZNRF3 chr22 28987201 + NF2 chr22 29636751 + Exonic hg38 LUSC TCGA-34-A5IX-01A 3 24 In-Frame Intra-chr q12.1 q12.2 Oncogene Tumor suppressor gene Seq+ 94978 ChimerSeq TCGA FAWG TCGA_RNA-Seq APTR-GSAP APTR chr7 77695896 - GSAP chr7 77406105 - Exonic hg38 LUSC TCGA-34-A5IX-01A 5 8 3'UTR-3'UTR Intra-chr q11.23 q11.23 94979 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD1B-MLXIP SETD1B chr12 121805216 + MLXIP chr12 122132292 + Exonic hg38 LUSC TCGA-34-A5IX-01A 3 15 CDS-3'UTR Intra-chr q24.31 Transcription factor Seq+ 94980 ChimerSeq TCGA FAWG TCGA_RNA-Seq MATR3-PSD2 MATR3 chr5 139293805 + PSD2 chr5 139809391 + Exonic hg38 LUSC TCGA-34-A5IX-01A 1 14 5'UTR-5'UTR Intra-chr q31.2 q31.2 94981 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF2-MTMR3 NF2 chr22 29604112 + MTMR3 chr22 29957036 + Exonic hg38 LUSC TCGA-34-A5IX-01A 3 6 5'UTR-5'UTR Intra-chr q12.2 Oncogene Tumor suppressor gene q12.2 Seq+ 94982 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTEN-KIF20B PTEN chr10 87894109 + KIF20B chr10 89737387 + Exonic hg38 LUSC TCGA-34-A5IX-01A 3 6 3'UTR-CDS Intra-chr q23.31 Oncogene Tumor suppressor gene q23.31 Seq+ 94983 ChimerSeq TCGA FAWG TCGA_RNA-Seq STX6-TNR STX6 chr1 181002606 - TNR chr1 175406777 - Exonic hg38 LUSC TCGA-34-A5IX-01A 3 4 CDS-5'UTR Intra-chr q25.3 q25.1 Seq+ 94984 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKP4-TANC1 PKP4 chr2 158533316 + TANC1 chr2 159224232 + Exonic hg38 LUSC TCGA-34-A5IX-01A 1 9 In-Frame Intra-chr q24.1 q24.2 94985 ChimerSeq TCGA FAWG TCGA_RNA-Seq QSOX1-LHX4 QSOX1 chr1 180176034 + LHX4 chr1 180266393 + Exonic hg38 LUSC TCGA-34-A5IX-01A 1000 1000 Out-of-frame Intra-chr q25.2 q25.2 Tumor suppressor gene Transcription factor Seq+ 94986 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOMM20-DPT TOMM20 chr1 235119818 - DPT chr1 168714346 - Exonic hg38 LUSC TCGA-37-3783-01A 2 9 Out-of-frame Intra-chr q42.3 q24.2 Seq+ 94987 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFG-TMEM45A TFG chr3 100720058 + TMEM45A chr3 100555209 + Exonic hg38 LUSC TCGA-37-3783-01A 2 7 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 94988 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD51AP1-SLCO1C1 RAD51AP1 chr12 4543904 + SLCO1C1 chr12 20737107 + Exonic hg38 LUSC TCGA-37-3792-01A 15 125 In-Frame Intra-chr p13.32 p12.2 Seq+ 94989 ChimerSeq TCGA FAWG TCGA_RNA-Seq HGS-GNAO1 HGS chr17 81687095 + GNAO1 chr16 56343763 + Exonic hg38 LUSC TCGA-37-3792-01A 1 126 Out-of-frame Inter-chr q25.3 q13 Seq+ 94990 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARL16-C16orf70 ARL16 chr17 81683536 - C16orf70 chr16 67125959 + Exonic hg38 LUSC TCGA-37-3792-01A 4 25 In-Frame Inter-chr q25.3 q22.1 Seq+ 94991 ChimerSeq TCGA FAWG TCGA_RNA-Seq MORC3-FAM3B MORC3 chr21 36372531 + FAM3B chr21 41338378 + Exonic hg38 LUSC TCGA-37-3792-01A 1 16 Out-of-frame Intra-chr q22.12 q22.3 Seq+ 94992 ChimerSeq TCGA FAWG TCGA_RNA-Seq C16orf70-ARL16 C16orf70 chr16 67120194 + ARL16 chr17 81683126 - Exonic hg38 LUSC TCGA-37-3792-01A 1 11 In-Frame Inter-chr q22.1 q25.3 94993 ChimerSeq TCGA FAWG TCGA_RNA-Seq REV3L-GTF2H5 REV3L chr6 111367115 - GTF2H5 chr6 158191977 + Exonic hg38 LUSC TCGA-37-4129-01A 1 14 Out-of-frame Intra-chr q21 q25.3 94994 ChimerSeq TCGA FAWG TCGA_RNA-Seq AIG1-IL20RA AIG1 chr6 143165183 + IL20RA chr6 137038131 - Exonic hg38 LUSC TCGA-37-4129-01A 2 2 5'UTR-5'UTR Intra-chr q24.2 q23.3 94995 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBAP2L-EEFSEC UBAP2L chr1 154241565 + EEFSEC chr3 128408069 + Exonic hg38 LUSC TCGA-37-4130-01A 25 93 CDS-3'UTR Inter-chr q21.3 q21.3 Seq+ 94996 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDZD8-PCLAF PDZD8 chr10 117374356 - PCLAF chr15 64381038 - Exonic hg38 LUSC TCGA-37-4130-01A 6 17 Out-of-frame Inter-chr q26.11 q22.31 94997 ChimerSeq TCGA FAWG TCGA_RNA-Seq GINS1-SYNDIG1 GINS1 chr20 25446039 + SYNDIG1 chr20 24665346 + Exonic hg38 LUSC TCGA-37-4130-01A 5 13 5'UTR-5'UTR Intra-chr p11.21 p11.21 Seq+ 94998 ChimerSeq TCGA FAWG TCGA_RNA-Seq GART-PCP4 GART chr21 33511252 - PCP4 chr21 39928984 + Exonic hg38 LUSC TCGA-37-4130-01A 1 12 5'UTR-CDS Intra-chr q22.2 Seq+ 94999 ChimerSeq TCGA FAWG TCGA_RNA-Seq PYGL-TRIM9 PYGL chr14 50908271 - TRIM9 chr14 50977353 - Exonic hg38 LUSC TCGA-37-4130-01A 1 3 In-Frame Intra-chr q22.1 q22.1 Seq+ 95000 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBF2-PRMT3 SBF2 chr11 10294015 - PRMT3 chr11 20452130 + Exonic hg38 LUSC TCGA-37-4132-01A 14 25 Out-of-frame Intra-chr p15.4 p15.1 Transcription factor Seq+ 95001 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUX1-EHBP1L1 CUX1 chr7 101816093 + EHBP1L1 chr11 65584241 + Exonic hg38 LUSC TCGA-37-4132-01A 1 6 In-Frame Inter-chr q22.1 Tumor suppressor gene Transcription factor q13.1 Seq+ 95002 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD9-PDIA3 STARD9 chr15 42695880 + PDIA3 chr15 43753824 + Exonic hg38 LUSC TCGA-37-4132-01A 1 1 Out-of-frame Intra-chr q15.2 q15.3 95003 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL48-GDPD5 MRPL48 chr11 73808350 + GDPD5 chr11 75444495 - Exonic hg38 LUSC TCGA-37-4135-01A 8 51 Out-of-frame Intra-chr q13.4 q13.5 Seq+ 95004 ChimerSeq TCGA FAWG TCGA_RNA-Seq CP-MRAS CP chr3 149221647 - MRAS chr3 138397324 + Exonic hg38 LUSC TCGA-37-4135-01A 2 24 Out-of-frame Intra-chr q25.1 q22.3 Seq+ 95005 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3C3-TRPC6 PIK3C3 chr18 41993341 + TRPC6 chr11 101504798 - Exonic hg38 LUSC TCGA-37-4135-01A 5 11 Out-of-frame Inter-chr q12.3 q22.1 Seq+ 95006 ChimerSeq TCGA FAWG TCGA_RNA-Seq KC6-LAMA3 KC6 chr18 41632000 - LAMA3 chr18 23951684 + Exonic hg38 LUSC TCGA-37-4135-01A 3 16 5'UTR-CDS Intra-chr q12.3 q11.2 95007 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE3A-DISC1FP1 UBE3A chr15 25370566 - DISC1FP1 chr11 90852616 + Exonic hg38 LUSC TCGA-37-4135-01A 1 24 CDS-5'UTR Inter-chr q11.2 q14.3 95008 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF33B-CCPG1 ZNF33B chr10 42631929 - CCPG1 chr15 55378376 - Exonic hg38 LUSC TCGA-37-5819-01A 10 41 In-Frame Inter-chr q11.21 Transcription factor q21.3 Seq+ 95009 ChimerSeq TCGA FAWG TCGA_RNA-Seq WASHC2A-LURAP1L WASHC2A chr10 50119769 + LURAP1L chr9 12821386 + Exonic hg38 LUSC TCGA-37-5819-01A 3 9 In-Frame Inter-chr q11.23 p23 95010 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK13-YAE1D1 CDK13 chr7 40047877 + YAE1D1 chr7 39570506 + Exonic hg38 LUSC TCGA-37-5819-01A 3 4 Out-of-frame Intra-chr p14.1 p14.1 95011 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D12-EXOC6 TBC1D12 chr10 94511654 + EXOC6 chr10 92893349 + Exonic hg38 LUSC TCGA-37-5819-01A 1 3 Out-of-frame Intra-chr q23.33 q23.33 Seq+ 95012 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMC6-GPR137C PSMC6 chr14 52713968 + GPR137C chr14 52596917 + Exonic hg38 LUSC TCGA-37-A5EL-01A 7 47 5'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 95013 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF13A-F13A1 KIF13A chr6 17987054 - F13A1 chr6 6197326 - Exonic hg38 LUSC TCGA-37-A5EM-01A 83 529 In-Frame Intra-chr p22.3 p25.1 Seq+ 95014 ChimerSeq TCGA FAWG TCGA_RNA-Seq FARS2-CASC15 FARS2 chr6 5431172 + CASC15 chr6 22290878 + Exonic hg38 LUSC TCGA-37-A5EM-01A 3 20 CDS-3'UTR Intra-chr p25.1 p22.3 95015 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANBP9-NEDD9 RANBP9 chr6 13696785 - NEDD9 chr6 11306155 - Exonic hg38 LUSC TCGA-37-A5EM-01A 2 8 CDS-5'UTR Intra-chr p23 Tumor suppressor gene p24.2 Seq+ 95016 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANBP9-PHACTR1 RANBP9 chr6 13696785 - PHACTR1 chr6 12933633 + Exonic hg38 LUSC TCGA-37-A5EM-01A 2 2 CDS-5'UTR Intra-chr p23 Tumor suppressor gene 95017 ChimerSeq TCGA FAWG TCGA_RNA-Seq GMDS-CAP2 GMDS chr6 2115771 - CAP2 chr6 17421555 + Exonic hg38 LUSC TCGA-37-A5EM-01A 1 3 CDS-5'UTR Intra-chr p25.3 p22.3 95018 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTGFRN-CD2 PTGFRN chr1 116961668 + CD2 chr1 116754631 + Exonic hg38 LUSC TCGA-37-A5EN-01A 8 64 In-Frame Intra-chr p13.1 p13.1 Seq+ 95019 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNPO2-HOOK2 TNPO2 chr19 12711296 - HOOK2 chr19 12774897 - Exonic hg38 LUSC TCGA-37-A5EN-01A 3 7 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 95020 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD27-ZNF536 ANKRD27 chr19 32607635 - ZNF536 chr19 30534847 + Exonic hg38 LUSC TCGA-37-A5EN-01A 2 9 Out-of-frame Intra-chr q13.11 q12 Transcription factor Seq+ 95021 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF571-TSHZ3 ZNF571 chr19 37586668 - TSHZ3 chr19 31279752 - Exonic hg38 LUSC TCGA-37-A5EN-01A 2 1 Out-of-frame Intra-chr q13.12 Transcription factor q12 Transcription factor 95022 ChimerSeq TCGA FAWG TCGA_RNA-Seq ULK1-SFSWAP ULK1 chr12 131914477 + SFSWAP chr12 131797178 + Exonic hg38 LUSC TCGA-37-A5EN-01A 1 1 In-Frame Intra-chr q24.33 Other:ULK q24.33 Seq+ 95023 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYPL1-TMEM168 SYPL1 chr7 106097690 - TMEM168 chr7 112767744 - Exonic hg38 LUSC TCGA-39-5011-01A 54 289 Out-of-frame Intra-chr q22.3 q31.1 Seq+ 95024 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP6V1F-CPED1 ATP6V1F chr7 128863062 + CPED1 chr7 121295440 + Exonic hg38 LUSC TCGA-39-5011-01A 12 161 Out-of-frame Intra-chr q32.1 q31.31 Seq+ 95025 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIPK2-GRM8 HIPK2 chr7 139600417 - GRM8 chr7 126609498 - Exonic hg38 LUSC TCGA-39-5011-01A 12 80 Out-of-frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q31.33 Oncogene Seq+ 95026 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP9-PPP2R3B AKAP9 chr7 91941147 + PPP2R3B chrY 361590 - Exonic hg38 LUSC TCGA-39-5011-01A 4 31 CDS-5'UTR Inter-chr q21.2 Oncogene p22.33 Seq+ 95027 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM60A-COA1 FAM60A chr12 31326024 - COA1 chr7 43648652 - Exonic hg38 LUSC TCGA-39-5011-01A 1 30 Out-of-frame Inter-chr p13 95028 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZCCHC7-ZBTB7C ZCCHC7 chr9 37126942 + ZBTB7C chr18 48338398 - Exonic hg38 LUSC TCGA-39-5011-01A 1 11 CDS-5'UTR Inter-chr p13.2 q21.1 Tumor suppressor gene Transcription factor Seq+ 95029 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAPK2-WDR1 DAPK2 chr15 63930432 - WDR1 chr4 10084491 - Exonic hg38 LUSC TCGA-39-5011-01A 3 1 Out-of-frame Inter-chr q22.31 CAMK:DAPK Tumor suppressor gene p16.1 95030 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRCAM-CUX1 NRCAM chr7 108312665 - CUX1 chr7 102277949 + Exonic hg38 LUSC TCGA-39-5011-01A 1 4 5'UTR-CDS Intra-chr q31.1 Tumor suppressor gene q22.1 Tumor suppressor gene Transcription factor 95031 ChimerSeq TCGA FAWG TCGA_RNA-Seq API5-FOLH1 API5 chr11 43335994 + FOLH1 chr11 49146945 - Exonic hg38 LUSC TCGA-39-5016-01A 1000 1000 Out-of-frame Intra-chr p12 p11.12 Seq+ 95032 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFIP11-AMPD1 TFIP11 chr22 26512099 - AMPD1 chr1 114688741 - Exonic hg38 LUSC TCGA-39-5019-01A 4 24 Out-of-frame Inter-chr q12.1 p13.2 Seq+ 95033 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF653-NFIC ZNF653 chr19 11505488 - NFIC chr19 3425106 + Exonic hg38 LUSC TCGA-39-5019-01A 5 19 Out-of-frame Intra-chr p13.2 Transcription factor p13.3 Transcription factor Seq+ 95034 ChimerSeq TCGA FAWG TCGA_RNA-Seq FZR1-CNN1 FZR1 chr19 3523058 + CNN1 chr19 11541076 + Exonic hg38 LUSC TCGA-39-5019-01A 2 25 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.2 Tumor suppressor gene Seq+ 95035 ChimerSeq TCGA FAWG TCGA_RNA-Seq PQLC2L-CHRD PQLC2L chr3 157543509 + CHRD chr3 184388587 + Exonic hg38 LUSC TCGA-39-5019-01A 2 16 Out-of-frame Intra-chr q25.32 q27.1 95036 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHRS1-METTL3 DHRS1 chr14 24298957 - METTL3 chr14 21501903 - Exonic hg38 LUSC TCGA-39-5019-01A 2 14 5'UTR-CDS Intra-chr q12 q11.2 Seq+ 95037 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPP-CHRD LPP chr3 188484704 + CHRD chr3 184382818 + Exonic hg38 LUSC TCGA-39-5019-01A 1000 1000 CDS-5'UTR Intra-chr q27.3 Oncogene q27.1 95038 ChimerSeq TCGA FAWG TCGA_RNA-Seq APTX-SMU1 APTX chr9 33025000 - SMU1 chr9 33048258 - Exonic hg38 LUSC TCGA-39-5022-01A 1 10 5'UTR-CDS Intra-chr p21.1 p21.1 95039 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806934 + TACC3 chr4 1739702 + Exonic hg38 LUSC TCGA-39-5024-01A 357 1692 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 95040 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIP5K1A-TNFAIP8L2 PIP5K1A chr1 151199081 + TNFAIP8L2 chr1 151158666 + Exonic hg38 LUSC TCGA-39-5024-01A 3 4 CDS-5'UTR Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 95041 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIP5K1A-SCNM1 PIP5K1A chr1 151199081 + SCNM1 chr1 151166934 + Exonic hg38 LUSC TCGA-39-5024-01A 1 11 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 95042 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF122-IDO2 RNF122 chr8 33551044 - IDO2 chr8 39963608 + Exonic hg38 LUSC TCGA-39-5024-01A 1 10 In-Frame Intra-chr p12 p11.21 95043 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRC2C-NAA25 PRRC2C chr1 171587751 + NAA25 chr12 112033379 - Exonic hg38 LUSC TCGA-39-5024-01A 1 1 Out-of-frame Inter-chr q24.3 q24.13 95044 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK8-PARG MAPK8 chr10 48306821 + PARG chr10 49885295 - Exonic hg38 LUSC TCGA-39-5027-01A 5 7 5'UTR-CDS Intra-chr q11.22 Oncogene q11.23 Seq+ 95045 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARMC7-HN1 ARMC7 chr17 75110606 + HN1 chr17 75136250 - Exonic hg38 LUSC TCGA-39-5028-01A 7 26 Out-of-frame Intra-chr q25.1 Seq+ 95046 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCA1-ZBTB6 ABCA1 chr9 104883039 - ZBTB6 chr9 122912081 - Exonic hg38 LUSC TCGA-39-5028-01A 3 7 CDS-5'UTR Intra-chr q31.1 q33.2 Transcription factor Seq+ 95047 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPC4-IGHJ4 GPC4 chrX 133414993 - IGHJ4 chr14 105864256 - Exonic hg38 LUSC TCGA-39-5029-01A 25 0 Out-of-frame Inter-chr q26.2 Seq+ 95048 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENAH-AEBP2 ENAH chr1 225652686 - AEBP2 chr12 19462510 + Exonic hg38 LUSC TCGA-39-5029-01A 3 14 In-Frame Inter-chr q42.12 p12.3 Transcription factor Seq+ 95049 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAF3-BMP3 TRAF3 chr14 102830472 + BMP3 chr4 81045738 + Exonic hg38 LUSC TCGA-39-5030-01A 4 50 5'UTR-3'UTR Inter-chr q32.32 q21.21 Seq+ 95050 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNTB-MNAT1 FNTB chr14 65027781 + MNAT1 chr14 60968229 + Exonic hg38 LUSC TCGA-39-5031-01A 3 6 In-Frame Intra-chr q23.3 q23.1 Seq+ 95051 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4C-FGF7 KDM4C chr9 6758203 + FGF7 chr15 49483151 + Exonic hg38 LUSC TCGA-39-5031-01A 1 4 5'UTR-CDS Inter-chr p24.1 q21.2 95052 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTLL7-GNG5 TTLL7 chr1 83998931 - GNG5 chr1 84501970 - Exonic hg38 LUSC TCGA-39-5034-01A 8 32 5'UTR-CDS Intra-chr p31.1 p22.3 Seq+ 95053 ChimerSeq TCGA FAWG TCGA_RNA-Seq NKX2-SLC25A21 NKX2 chr14 36518985 - SLC25A21 chr14 36683880 - Exonic hg38 LUSC TCGA-39-5034-01A 6 8 Out-of-frame Intra-chr q13.3 95054 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP1-AANAT AGAP1 chr2 235494849 + AANAT chr17 76462316 + Exonic hg38 LUSC TCGA-39-5034-01A 2 14 CDS-5'UTR Inter-chr q37.2 q25.1 Seq+ 95055 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPN15-DECR2 CAPN15 chr16 528029 + DECR2 chr16 404956 + Exonic hg38 LUSC TCGA-39-5034-01A 3 4 5'UTR-3'UTR Intra-chr p13.3 Seq+ 95056 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPN15-NME4 CAPN15 chr16 528029 + NME4 chr16 404956 + Exonic hg38 LUSC TCGA-39-5034-01A 3 3 5'UTR-3'UTR Intra-chr p13.3 p13.3 Seq+ 95057 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX34-ARHGAP35 DHX34 chr19 47360070 + ARHGAP35 chr19 46987989 + Exonic hg38 LUSC TCGA-39-5034-01A 2 3 In-Frame Intra-chr q13.32 q13.32 Transcription factor 95058 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEK7-ATP2B4 NEK7 chr1 198157276 + ATP2B4 chr1 203682742 + Exonic hg38 LUSC TCGA-39-5034-01A 1 5 5'UTR-5'UTR Intra-chr q31.3 Other:NEK q32.1 Seq+ 95059 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFTA3-SLC25A21 SFTA3 chr14 36513113 - SLC25A21 chr14 36683881 - Exonic hg38 LUSC TCGA-39-5034-01A 1000 1000 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 95060 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBB-MDC1 TUBB chr6 30723762 + MDC1 chr6 30700573 - Exonic hg38 LUSC TCGA-39-5035-01A 143 879 Out-of-frame Intra-chr Tumor suppressor gene Seq+ 95061 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL1RAP-TP63 IL1RAP chr3 190514219 + TP63 chr3 189808272 + Exonic hg38 LUSC TCGA-39-5035-01A 42 283 5'UTR-CDS Intra-chr q28 q28 Tumor suppressor gene Transcription factor Seq+ 95062 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFA10-SGPP2 NDUFA10 chr2 239990074 - SGPP2 chr2 222521767 + Exonic hg38 LUSC TCGA-39-5035-01A 9 46 In-Frame Intra-chr q36.1 Seq+ 95063 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX8-KDELR2 SNX8 chr7 2314328 - KDELR2 chr7 6463175 - Exonic hg38 LUSC TCGA-39-5035-01A 2 13 In-Frame Intra-chr p22.3 p22.1 Seq+ 95064 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGGY-KIF2C FGGY chr1 59378837 + KIF2C chr1 44747384 + Exonic hg38 LUSC TCGA-39-5035-01A 2 5 Out-of-frame Intra-chr p32.1 p34.1 Seq+ 95065 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNT5B-NINJ2 WNT5B chr12 1530950 + NINJ2 chr12 566178 - Exonic hg38 LUSC TCGA-39-5036-01A 1 4 5'UTR-5'UTR Intra-chr p13.33 p13.33 Seq+ 95066 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB25-PMF1 RAB25 chr1 156061443 + PMF1 chr1 156232320 + Exonic hg38 LUSC TCGA-39-5037-01A 64 468 Out-of-frame Intra-chr q22 Tumor suppressor gene q22 Seq+ 95067 ChimerSeq TCGA FAWG TCGA_RNA-Seq HECTD4-FMNL2 HECTD4 chr12 112226469 - FMNL2 chr2 152649679 + Exonic hg38 LUSC TCGA-39-5037-01A 5 3 Out-of-frame Inter-chr q24.13 q23.3 Seq+ 95068 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLCO4A1-PFDN4 SLCO4A1 chr20 62657250 + PFDN4 chr20 54208013 + Exonic hg38 LUSC TCGA-39-5037-01A 3 4 CDS-5'UTR Intra-chr q13.33 q13.2 95069 ChimerSeq TCGA FAWG TCGA_RNA-Seq APTX-ARL5B APTX chr9 32987760 - ARL5B chr10 18672622 + Exonic hg38 LUSC TCGA-39-5037-01A 2 6 In-Frame Inter-chr p21.1 p12.31 Seq+ 95070 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNL2-MRPL20 CCNL2 chr1 1398233 - MRPL20 chr1 1402256 - Exonic hg38 LUSC TCGA-39-5039-01A 3 14 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 95071 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4K5-RPEL1 MAP4K5 chr14 50482361 - RPEL1 chr10 103247730 + Exonic hg38 LUSC TCGA-39-5039-01A 3 6 CDS-3'UTR Inter-chr q22.1 q24.33 95072 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R12B-SUSD4 PPP1R12B chr1 202349142 + SUSD4 chr1 223235100 - Exonic hg38 LUSC TCGA-39-5040-01A 2 9 Out-of-frame Intra-chr q32.1 q41 Seq+ 95073 ChimerSeq TCGA FAWG TCGA_RNA-Seq URI1-CCNE1 URI1 chr19 29942664 + CCNE1 chr19 29812689 + Exonic hg38 LUSC TCGA-39-5040-01A 1 13 Out-of-frame Intra-chr q12 q12 Oncogene 95074 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA6C-CERS2 SEMA6C chr1 151139425 - CERS2 chr1 150969091 - Exonic hg38 LUSC TCGA-39-5040-01A 1 3 CDS-5'UTR Intra-chr q21.3 q21.3 95075 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFT2D2-SUCO SFT2D2 chr1 168239160 + SUCO chr1 172551512 + Exonic hg38 LUSC TCGA-43-2576-01A 109 306 In-Frame Intra-chr q24.2 q24.3 Seq+ 95076 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF11-SMCP ARHGEF11 chr1 157044299 - SMCP chr1 152884403 + Exonic hg38 LUSC TCGA-43-2576-01A 3 8 CDS-5'UTR Intra-chr q23.1 q21.3 Seq+ 95077 ChimerSeq TCGA FAWG TCGA_RNA-Seq HS6ST3-EIF4EBP1 HS6ST3 chr13 96091569 + EIF4EBP1 chr8 38057081 + Exonic hg38 LUSC TCGA-43-2576-01A 2 8 Out-of-frame Inter-chr q32.1 p11.23 Seq+ 95078 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFCP2-SMAGP TFCP2 chr12 51172301 - SMAGP chr12 51246831 - Exonic hg38 LUSC TCGA-43-2576-01A 1 5 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 95079 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A1-RAB13 SLC39A1 chr1 153962220 - RAB13 chr1 153984781 - Exonic hg38 LUSC TCGA-43-2576-01A 1 4 Out-of-frame Intra-chr q21.3 Tumor suppressor gene q21.3 95080 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM155A-FGF14 FAM155A chr13 107865682 - FGF14 chr13 101726810 - Exonic hg38 LUSC TCGA-43-2576-01A 1 3 In-Frame Intra-chr q33.3 q33.1 Seq+ 95081 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLG1-CFDP1 GLG1 chr16 74532121 - CFDP1 chr16 75294042 - Exonic hg38 LUSC TCGA-43-2578-01A 31 136 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 95082 ChimerSeq TCGA FAWG TCGA_RNA-Seq GBE1-ZNF385D GBE1 chr3 81577925 - ZNF385D chr3 21437203 - Exonic hg38 LUSC TCGA-43-2578-01A 21 61 In-Frame Intra-chr p12.2 p24.3 Transcription factor Seq+ 95083 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXNRD1-HCFC2 TXNRD1 chr12 104289040 + HCFC2 chr12 104080746 + Exonic hg38 LUSC TCGA-43-2578-01A 6 69 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 95084 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPA2B1-SKAP2 HNRNPA2B1 chr7 26195847 - SKAP2 chr7 26690362 - Exonic hg38 LUSC TCGA-43-2578-01A 3 5 In-Frame Intra-chr p15.2 p15.2 Seq+ 95085 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGAV-FARP2 ITGAV chr2 186669814 + FARP2 chr2 241489962 + Exonic hg38 LUSC TCGA-43-2578-01A 2 8 In-Frame Intra-chr q32.1 Tumor suppressor gene q37.3 Seq+ 95086 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAPD5-HEATR3 PAPD5 chr16 50154259 + HEATR3 chr16 50083937 + Exonic hg38 LUSC TCGA-43-2578-01A 3 3 Out-of-frame Intra-chr q12.1 q12.1 95087 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB6B-VEPH1 RAB6B chr3 133864584 - VEPH1 chr3 157470529 - Exonic hg38 LUSC TCGA-43-2578-01A 1 3 In-Frame Intra-chr q22.1 q25.32 95088 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL21B-RASSF3 METTL21B chr12 57773128 + RASSF3 chr12 64684787 + Exonic hg38 LUSC TCGA-43-2581-01A 76 269 Out-of-frame Intra-chr q14.2 Tumor suppressor gene Seq+ 95089 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBALD2-TIMP2 UBALD2 chr17 76265969 + TIMP2 chr17 78873919 - Exonic hg38 LUSC TCGA-43-2581-01A 28 120 Out-of-frame Intra-chr q25.1 q25.3 Seq+ 95090 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBALD2-CEP295NL UBALD2 chr17 76265969 + CEP295NL chr17 78873919 - Exonic hg38 LUSC TCGA-43-2581-01A 28 117 CDS-3'UTR Intra-chr q25.1 q25.3 95091 ChimerSeq TCGA FAWG TCGA_RNA-Seq NMT1-NME1 NMT1 chr17 45061460 + NME1 chr17 51155651 + Exonic hg38 LUSC TCGA-43-2581-01A 7 82 In-Frame Intra-chr q21.31 q21.33 Tumor suppressor gene Seq+ 95092 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSI2-ARL17B MSI2 chr17 57262192 + ARL17B chr17 46275418 - Exonic hg38 LUSC TCGA-43-2581-01A 7 47 CDS-5'UTR Intra-chr q22 Seq+ 95093 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNK-AVIL UNK chr17 75784984 + AVIL chr12 57816059 - Exonic hg38 LUSC TCGA-43-2581-01A 5 31 5'UTR-5'UTR Inter-chr q25.1 q14.1 Seq+ 95094 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC2-PRKCA TANC2 chr17 63074014 + PRKCA chr17 66687111 + Exonic hg38 LUSC TCGA-43-2581-01A 7 22 In-Frame Intra-chr q23.2 q24.2 Seq+ 95095 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGKE-EPN3 DGKE chr17 56835259 + EPN3 chr17 50540793 + Exonic hg38 LUSC TCGA-43-2581-01A 3 21 Out-of-frame Intra-chr q22 q21.33 Seq+ 95096 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPSAP2-CYP27B1 PRPSAP2 chr17 18923984 + CYP27B1 chr12 57765499 - Exonic hg38 LUSC TCGA-43-2581-01A 2 4 Out-of-frame Inter-chr p11.2 q14.1 95097 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGB4-SMIM6 ITGB4 chr17 75733692 + SMIM6 chr17 75646655 + Exonic hg38 LUSC TCGA-43-3394-01A 53 266 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 95098 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCY3-HADHA ADCY3 chr2 24918313 - HADHA chr2 26194638 - Exonic hg38 LUSC TCGA-43-3394-01A 1 5 In-Frame Intra-chr p23.3 p23.3 95099 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP4R3B-GRM3 PPP4R3B chr2 55585051 - GRM3 chr7 86765006 + Exonic hg38 LUSC TCGA-43-3394-01A 1 4 CDS-5'UTR Inter-chr p16.1 q21.11 95100 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIDO1-RPS4X DIDO1 chr20 62937796 - RPS4X chrX 72275724 - Exonic hg38 LUSC TCGA-43-3920-01A 48 236 5'UTR-3'UTR Inter-chr q13.33 Tumor suppressor gene q13.1 Seq+ 95101 ChimerSeq TCGA FAWG TCGA_RNA-Seq ART3-NUP54 ART3 chr4 76103969 + NUP54 chr4 76115494 - Exonic hg38 LUSC TCGA-43-3920-01A 38 119 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 95102 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNK-DPYD UNK chr17 75784984 + DPYD chr1 97573970 - Exonic hg38 LUSC TCGA-43-3920-01A 7 67 Out-of-frame Inter-chr q25.1 p21.3 Oncogene Seq+ 95103 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFA11-ZNF846 NDUFA11 chr19 5896453 - ZNF846 chr19 9787810 - Exonic hg38 LUSC TCGA-43-3920-01A 1 7 CDS-5'UTR Intra-chr p13.3 p13.2 Transcription factor 95104 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF3L-TRIOBP EIF3L chr22 37878171 + TRIOBP chr22 37751772 + Exonic hg38 LUSC TCGA-43-5668-01A 28 214 In-Frame Intra-chr q13.1 q13.1 Seq+ 95105 ChimerSeq TCGA FAWG TCGA_RNA-Seq TC2N-LPP TC2N chr14 91813703 - LPP chr3 188866200 + Exonic hg38 LUSC TCGA-43-5668-01A 22 132 5'UTR-CDS Inter-chr q27.3 Oncogene Seq+ 95106 ChimerSeq TCGA FAWG TCGA_RNA-Seq THOC5-LYZ THOC5 chr22 29517029 - LYZ chr12 69352220 + Exonic hg38 LUSC TCGA-43-5668-01A 1 65 In-Frame Inter-chr q12.2 q15 Seq+ 95107 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTMR3-RNF215 MTMR3 chr22 29957088 + RNF215 chr22 30380401 - Exonic hg38 LUSC TCGA-43-5668-01A 6 23 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 95108 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFS4-EXTL3 NDUFS4 chr5 53603530 + EXTL3 chr8 28737519 + Exonic hg38 LUSC TCGA-43-5668-01A 5 23 Out-of-frame Inter-chr q11.2 p21.1 Tumor suppressor gene Seq+ 95109 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK3-FBLN5 MARK3 chr14 103405267 + FBLN5 chr14 91895072 - Exonic hg38 LUSC TCGA-43-5668-01A 4 25 Out-of-frame Intra-chr q32.32 CAMK:CAMKL q32.12 Seq+ 95110 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARCH1-PTPN13 2019_ 3_ 1_ chr4 163854021 - PTPN13 chr4 86635252 + Exonic hg38 LUSC TCGA-43-5668-01A 1 4 Out-of-frame Intra-chr q32.3 q21.3 Tumor suppressor gene Seq+ 95111 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK16-L3MBTL4 CDK16 chrX 47226703 + L3MBTL4 chr18 6093528 - Exonic hg38 LUSC TCGA-43-5668-01A 1 2 In-Frame Inter-chr p11.3 p11.31 Tumor suppressor gene Transcription factor 95112 ChimerSeq TCGA FAWG TCGA_RNA-Seq MXRA8-CDK11B MXRA8 chr1 1358456 - CDK11B chr1 1657498 - Exonic hg38 LUSC TCGA-43-5670-01A 41 157 CDS-5'UTR Intra-chr p36.33 p36.33 95113 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM222B-TLCD1 FAM222B chr17 28842682 - TLCD1 chr17 28724893 - Exonic hg38 LUSC TCGA-43-5670-01A 6 49 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 95114 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNPO2-DNASE2 TNPO2 chr19 12705240 - DNASE2 chr19 12876363 - Exonic hg38 LUSC TCGA-43-5670-01A 7 41 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 95115 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTIF-MOCOS CTIF chr18 48539312 + MOCOS chr18 36248922 + Exonic hg38 LUSC TCGA-43-5670-01A 4 46 3'UTR-CDS Intra-chr q12.2 Seq+ 95116 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC88B-TEX40 CCDC88B chr11 64352386 + TEX40 chr11 64304543 + Exonic hg38 LUSC TCGA-43-5670-01A 4 21 Out-of-frame Intra-chr q13.1 Seq+ 95117 ChimerSeq TCGA FAWG TCGA_RNA-Seq RELT-TEX40 RELT chr11 73394149 + TEX40 chr11 64304543 + Exonic hg38 LUSC TCGA-43-5670-01A 3 15 Out-of-frame Intra-chr q13.4 Seq+ 95118 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCG1-CCDC134 ABCG1 chr21 42294660 + CCDC134 chr22 41808875 + Exonic hg38 LUSC TCGA-43-5670-01A 4 10 CDS-5'UTR Inter-chr q22.3 q13.2 Seq+ 95119 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC88B-RELT CCDC88B chr11 64352861 + RELT chr11 73393997 + Exonic hg38 LUSC TCGA-43-5670-01A 3 14 Out-of-frame Intra-chr q13.1 q13.4 Seq+ 95120 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCG1-MEI1 ABCG1 chr21 42294660 + MEI1 chr22 41799254 + Exonic hg38 LUSC TCGA-43-5670-01A 2 6 In-Frame Inter-chr q22.3 q13.2 Seq+ 95121 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBLN1-PAK4 FBLN1 chr22 45550615 + PAK4 chr19 39169532 + Exonic hg38 LUSC TCGA-43-5670-01A 1 9 CDS-5'UTR Inter-chr q13.31 Tumor suppressor gene q13.2 STE:STE20 95122 ChimerSeq TCGA FAWG TCGA_RNA-Seq IQCK-ABCC1 IQCK chr16 19735450 + ABCC1 chr16 16033109 + Exonic hg38 LUSC TCGA-43-5670-01A 2 4 CDS-3'UTR Intra-chr p12.3 Seq+ 95123 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1456-GATA4 KIAA1456 chr8 12991031 + GATA4 chr8 11748919 + Exonic hg38 LUSC TCGA-43-6143-01A 9 39 Out-of-frame Intra-chr p22 p23.1 Tumor suppressor gene Transcription factor Seq+ 95124 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNRF3-MED15 ZNRF3 chr22 28884066 + MED15 chr22 20537117 + Exonic hg38 LUSC TCGA-43-6143-01A 5 25 Out-of-frame Intra-chr q12.1 q11.21 Seq+ 95125 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D1-RAB28 TBC1D1 chr4 38054338 + RAB28 chr4 13479526 - Exonic hg38 LUSC TCGA-43-6143-01A 2 9 Out-of-frame Intra-chr p14 p15.33 Seq+ 95126 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIB-FREM1 NFIB chr9 14146689 - FREM1 chr9 14756446 - Exonic hg38 LUSC TCGA-43-6143-01A 1 4 Out-of-frame Intra-chr p22.3 Transcription factor p22.3 Seq+ 95127 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR3E-C16orf52 POLR3E chr16 22297537 + C16orf52 chr16 22075487 + Exonic hg38 LUSC TCGA-43-6143-01A 1 3 Out-of-frame Intra-chr Seq+ 95128 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL11A-MIR4432HG BCL11A chr2 60545971 - MIR4432HG chr2 60359848 - Exonic hg38 LUSC TCGA-43-6647-01A 2 13 CDS-3'UTR Intra-chr p16.1 Oncogene Transcription factor p16.1 95129 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCGF3-FANCI PCGF3 chr4 744688 + FANCI chr15 89312904 + Exonic hg38 LUSC TCGA-43-6770-01A 191 321 In-Frame Inter-chr p16.3 q26.1 Seq+ 95130 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPAP3-ADAM32 RPAP3 chr12 47679493 - ADAM32 chr8 39283586 + Exonic hg38 LUSC TCGA-43-6770-01A 6 49 CDS-3'UTR Inter-chr q13.11 Seq+ 95131 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTN4R-SLC35G2 RTN4R chr22 20268071 - SLC35G2 chr3 136854443 + Exonic hg38 LUSC TCGA-43-6770-01A 3 7 CDS-5'UTR Inter-chr q11.21 q22.3 95132 ChimerSeq TCGA FAWG TCGA_RNA-Seq COTL1-PREX2 COTL1 chr16 84617501 - PREX2 chr8 68191722 + Exonic hg38 LUSC TCGA-43-6770-01A 1 2 Out-of-frame Inter-chr q24.1 q13.2 95133 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIPK3-LARGE2 HIPK3 chr11 33257889 + LARGE2 chr11 45926222 + Exonic hg38 LUSC TCGA-43-6771-01A 85 517 5'UTR-CDS Intra-chr p13 CMGC:DYRK p11.2 95134 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6R3-ARHGAP1 PPP6R3 chr11 68460827 + ARHGAP1 chr11 46696156 - Exonic hg38 LUSC TCGA-43-6771-01A 27 238 5'UTR-5'UTR Intra-chr q13.2 p11.2 Seq+ 95135 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL21-FAM168A MRPL21 chr11 68893403 - FAM168A chr11 73407643 - Exonic hg38 LUSC TCGA-43-6771-01A 24 149 Out-of-frame Intra-chr q13.3 q13.4 Seq+ 95136 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-ALDH3B1 PPFIA1 chr11 70343892 + ALDH3B1 chr11 68027749 + Exonic hg38 LUSC TCGA-43-6771-01A 28 83 Out-of-frame Intra-chr q13.3 q13.2 Seq+ 95137 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-ENPP7P7 SHANK2 chr11 70659828 - ENPP7P7 chr11 67812753 - Exonic hg38 LUSC TCGA-43-6771-01A 7 13 Out-of-frame Intra-chr q13.4 q13.2 95138 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-C11orf49 SHANK2 chr11 70798443 - C11orf49 chr11 46987208 + Exonic hg38 LUSC TCGA-43-6771-01A 1 5 In-Frame Intra-chr q13.4 p11.2 Seq+ 95139 ChimerSeq TCGA FAWG TCGA_RNA-Seq LYST-NID1 LYST chr1 235812971 - NID1 chr1 236012043 - Exonic hg38 LUSC TCGA-43-7656-01A 1 5 In-Frame Intra-chr q42.3 q42.3 Seq+ 95140 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP5-AKAP6 ARHGAP5 chr14 32094386 + AKAP6 chr14 32773678 + Exonic hg38 LUSC TCGA-43-7656-01A 1 3 In-Frame Intra-chr q12 q12 95141 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB4B-COQ8B RAB4B chr19 40778391 + COQ8B chr19 40696054 - Exonic hg38 LUSC TCGA-43-7657-01A 40 139 Out-of-frame Intra-chr q13.2 q13.2 95142 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELF1-CHMP4B CELF1 chr11 47552992 - CHMP4B chr20 33850952 + Exonic hg38 LUSC TCGA-43-7657-01A 17 80 5'UTR-CDS Inter-chr p11.2 q11.22 Seq+ 95143 ChimerSeq TCGA FAWG TCGA_RNA-Seq LNX1-IFT122 LNX1 chr4 53573623 - IFT122 chr3 129449871 + Exonic hg38 LUSC TCGA-43-7657-01A 19 44 In-Frame Inter-chr q12 q21.3 Seq+ 95144 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFAND3-UBQLN1 ZFAND3 chr6 37929999 + UBQLN1 chr9 83686155 - Exonic hg38 LUSC TCGA-43-7657-01A 3 15 Out-of-frame Inter-chr p21.2 q21.32 Seq+ 95145 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF599-SCN1B ZNF599 chr19 34767316 - SCN1B chr19 35032528 + Exonic hg38 LUSC TCGA-43-7657-01A 2 3 In-Frame Intra-chr q13.11 Transcription factor q13.11 Seq+ 95146 ChimerSeq TCGA FAWG TCGA_RNA-Seq CWF19L2-JAML CWF19L2 chr11 107416209 - JAML chr11 118205991 - Exonic hg38 LUSC TCGA-43-7657-01A 1 6 Out-of-frame Intra-chr q22.3 q23.3 95147 ChimerSeq TCGA FAWG TCGA_RNA-Seq TECR-PKN1 TECR chr19 14529711 + PKN1 chr19 14463667 + Exonic hg38 LUSC TCGA-43-7658-01A 67 254 In-Frame Intra-chr p13.12 p13.12 AGC:PKN Seq+ 95148 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRCAP-IL11RA SRCAP chr16 30713711 + IL11RA chr9 34655218 + Exonic hg38 LUSC TCGA-43-7658-01A 19 88 CDS-5'UTR Inter-chr p11.2 Transcription factor p13.3 Seq+ 95149 ChimerSeq TCGA FAWG TCGA_RNA-Seq ART3-SLC25A13 ART3 chr4 76075958 + SLC25A13 chr7 96146696 - Exonic hg38 LUSC TCGA-43-7658-01A 15 87 In-Frame Inter-chr q21.1 q21.3 Seq+ 95150 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP9-CDK14 AKAP9 chr7 92084703 + CDK14 chr7 91079432 + Exonic hg38 LUSC TCGA-43-7658-01A 7 43 In-Frame Intra-chr q21.2 Oncogene q21.13 Seq+ 95151 ChimerSeq TCGA FAWG TCGA_RNA-Seq UTRN-MRPL42P3 UTRN chr6 144291907 + MRPL42P3 chr6 144136472 + Exonic hg38 LUSC TCGA-43-7658-01A 3 22 Out-of-frame Intra-chr q24.2 q24.2 95152 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNC1I1-CXCL11 DYNC1I1 chr7 96080488 + CXCL11 chr4 76036064 - Exonic hg38 LUSC TCGA-43-7658-01A 4 12 CDS-5'UTR Inter-chr q21.3 q21.1 Seq+ 95153 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM73-POR TRIM73 chr7 75395503 + POR chr7 75953989 + Exonic hg38 LUSC TCGA-43-7658-01A 4 6 5'UTR-5'UTR Intra-chr q11.23 q11.23 95154 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFP90-PRMT7 ZFP90 chr16 68530334 + PRMT7 chr16 68329066 + Exonic hg38 LUSC TCGA-43-7658-01A 3 3 5'UTR-5'UTR Intra-chr q22.1 Transcription factor q22.1 95155 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEX1-AKAP9 PEX1 chr7 92491272 - AKAP9 chr7 92052726 + Exonic hg38 LUSC TCGA-43-7658-01A 1 5 Out-of-frame Intra-chr q21.2 q21.2 Oncogene Seq+ 95156 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMSAP2-CARS CAMSAP2 chr1 200854889 + CARS chr11 3001248 - Exonic hg38 LUSC TCGA-43-8115-01A 5 25 CDS-5'UTR Inter-chr q32.1 Seq+ 95157 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R12A-ATP23 PPP1R12A chr12 79845302 - ATP23 chr12 57945628 + Exonic hg38 LUSC TCGA-43-8115-01A 4 23 CDS-5'UTR Intra-chr q21.31 95158 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGLN1-PTPRF EGLN1 chr1 231420998 - PTPRF chr1 43617445 + Exonic hg38 LUSC TCGA-43-8115-01A 3 18 In-Frame Intra-chr q42.2 Tumor suppressor gene p34.2 Seq+ 95159 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT6A-CSMD1 KAT6A chr8 42048378 - CSMD1 chr8 4637558 - Exonic hg38 LUSC TCGA-43-8115-01A 3 3 Out-of-frame Intra-chr p11.21 Oncogene p23.2 Tumor suppressor gene Seq+ 95160 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP35-NCKAP1 NUP35 chr2 183124497 + NCKAP1 chr2 182989186 - Exonic hg38 LUSC TCGA-43-8115-01A 2 3 In-Frame Intra-chr q32.1 q32.1 Seq+ 95161 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM234B-YBX3 FAM234B chr12 13044440 + YBX3 chr12 10719143 - Exonic hg38 LUSC TCGA-43-8115-01A 2 2 In-Frame Intra-chr p13.1 p13.2 Transcription factor 95162 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4A-EGLN1 KDM4A chr1 43660412 + EGLN1 chr1 231374099 - Exonic hg38 LUSC TCGA-43-8115-01A 1 6 In-Frame Intra-chr p34.2 q42.2 Tumor suppressor gene 95163 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA3-C18orf8 LAMA3 chr18 23714072 + C18orf8 chr18 23515856 + Exonic hg38 LUSC TCGA-43-8115-01A 1 6 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 95164 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF518A-ATRNL1 ZNF518A chr10 96133648 + ATRNL1 chr10 115549458 + Exonic hg38 LUSC TCGA-43-8116-01A 1 26 5'UTR-CDS Intra-chr q24.1 Transcription factor q25.3 95165 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG7-ARMC3 ATG7 chr3 11364734 + ARMC3 chr10 23030596 + Exonic hg38 LUSC TCGA-43-8116-01A 4 8 Out-of-frame Inter-chr p25.3 p12.2 Seq+ 95166 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATE1-DNAJB12 ATE1 chr10 121910906 - DNAJB12 chr10 72345127 - Exonic hg38 LUSC TCGA-43-8116-01A 1 8 In-Frame Intra-chr q26.13 q22.1 Seq+ 95167 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2AK4-FEM1B EIF2AK4 chr15 40022605 + FEM1B chr15 68289607 + Exonic hg38 LUSC TCGA-43-8116-01A 2 3 Out-of-frame Intra-chr q15.1 q23 95168 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM117-TTC33 TMEM117 chr12 43844928 + TTC33 chr5 40716498 - Exonic hg38 LUSC TCGA-43-8116-01A 1 6 Out-of-frame Inter-chr q12 p13.1 Seq+ 95169 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD51B-GPHN RAD51B chr14 67887204 + GPHN chr14 67159415 + Exonic hg38 LUSC TCGA-43-A474-01A 4 22 In-Frame Intra-chr q24.1 q23.3 Seq+ 95170 ChimerSeq TCGA FAWG TCGA_RNA-Seq MECOM-ARMC8 MECOM chr3 169381187 - ARMC8 chr3 138289048 + Exonic hg38 LUSC TCGA-43-A474-01A 3 7 In-Frame Intra-chr q26.2 Transcription factor q22.3 Seq+ 95171 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF8-SLC22A16 TAF8 chr6 42056014 + SLC22A16 chr6 110442775 - Exonic hg38 LUSC TCGA-43-A475-01A 151 413 Out-of-frame Intra-chr p21.1 q21 Seq+ 95172 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL24-BYSL METTL24 chr6 110322774 - BYSL chr6 41927374 + Exonic hg38 LUSC TCGA-43-A475-01A 16 76 Out-of-frame Intra-chr q21 p21.1 Seq+ 95173 ChimerSeq TCGA FAWG TCGA_RNA-Seq SF1-EHD1 SF1 chr11 64776498 - EHD1 chr11 64860336 - Exonic hg38 LUSC TCGA-43-A56U-01A 2 24 In-Frame Intra-chr q13.1 q13.1 Seq+ 95174 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOSL2-PPDPF FOSL2 chr2 28395777 + PPDPF chr20 63520786 + Exonic hg38 LUSC TCGA-43-A56U-01A 3 8 Out-of-frame Inter-chr p23.2 Transcription factor q13.33 95175 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBBP5-SPRR4 TUBBP5 chr9 138150308 + SPRR4 chr1 152971871 + Exonic hg38 LUSC TCGA-43-A56U-01A 3 7 5'UTR-5'UTR Inter-chr q34.3 q21.3 Seq+ 95176 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A24P2-NTNG1 SLC25A24P2 chr1 108410028 - NTNG1 chr1 107395154 + Exonic hg38 LUSC TCGA-43-A56V-01A 1 6 Out-of-frame Intra-chr p13.3 p13.3 95177 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCCC1-ADAMTSL3 MCCC1 chr3 183099352 - ADAMTSL3 chr15 83890109 + Exonic hg38 LUSC TCGA-46-3765-01A 7 35 Out-of-frame Inter-chr q27.1 q25.2 Seq+ 95178 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTF2-CTNND2 MTF2 chr1 93079531 + CTNND2 chr5 11199661 - Exonic hg38 LUSC TCGA-46-3765-01A 5 27 Out-of-frame Inter-chr p22.1 Transcription factor p15.2 Seq+ 95179 ChimerSeq TCGA FAWG TCGA_RNA-Seq DUSP12-CR2 DUSP12 chr1 161750145 + CR2 chr1 207485464 + Exonic hg38 LUSC TCGA-46-3765-01A 5 23 In-Frame Intra-chr q23.3 q32.2 Seq+ 95180 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGCR8-CRKL DGCR8 chr22 20109003 + CRKL chr22 20933779 + Exonic hg38 LUSC TCGA-46-3765-01A 2 23 Out-of-frame Intra-chr q11.21 q11.21 Oncogene Seq+ 95181 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALT1-PHF24 B4GALT1 chr9 33120419 - PHF24 chr9 34971295 + Exonic hg38 LUSC TCGA-46-3765-01A 5 8 CDS-5'UTR Intra-chr p21.1 p13.3 95182 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHRM3-CASQ1 CHRM3 chr1 239827378 + CASQ1 chr1 160192802 + Exonic hg38 LUSC TCGA-46-3765-01A 2 12 5'UTR-CDS Intra-chr q43 q23.2 Seq+ 95183 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIO-FBXL7 TRIO chr5 14390990 + FBXL7 chr5 15615983 + Exonic hg38 LUSC TCGA-46-3765-01A 1 9 Out-of-frame Intra-chr p15.2 p15.1 Seq+ 95184 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMC2-OAS2 LAMC2 chr1 183218488 + OAS2 chr12 112978596 + Exonic hg38 LUSC TCGA-46-3766-01A 3 10 CDS-5'UTR Inter-chr q25.3 q24.13 Seq+ 95185 ChimerSeq TCGA FAWG TCGA_RNA-Seq SACS-MIPEP SACS chr13 23411220 - MIPEP chr13 23841488 - Exonic hg38 LUSC TCGA-46-3767-01A 4 15 In-Frame Intra-chr q12.12 q12.12 Seq+ 95186 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTK2-UBE2H PTK2 chr8 141000880 - UBE2H chr7 129839335 - Exonic hg38 LUSC TCGA-46-3767-01A 1 8 5'UTR-CDS Inter-chr q24.3 q32.2 Seq+ 95187 ChimerSeq TCGA FAWG TCGA_RNA-Seq YEATS2-TPRG1 YEATS2 chr3 183777700 + TPRG1 chr3 189207376 + Exonic hg38 LUSC TCGA-46-3767-01A 1 3 CDS-5'UTR Intra-chr q27.1 q28 95188 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASAP2-TAF1B ASAP2 chr2 9207230 + TAF1B chr2 9882706 + Exonic hg38 LUSC TCGA-46-3767-01A 1 2 Out-of-frame Intra-chr p25.1 p25.1 95189 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXP4-CCND3 FOXP4 chr6 41578081 + CCND3 chr6 41940585 - Exonic hg38 LUSC TCGA-46-3769-01A 9 162 In-Frame Intra-chr p21.1 Oncogene Transcription factor p21.1 Seq+ 95190 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC1-TINAG LRRC1 chr6 53842227 + TINAG chr6 54343226 + Exonic hg38 LUSC TCGA-46-3769-01A 18 85 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 95191 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMTA1-DHRS3 CAMTA1 chr1 6785575 + DHRS3 chr1 12580666 - Exonic hg38 LUSC TCGA-46-3769-01A 9 53 In-Frame Intra-chr p36.31 Tumor suppressor gene Transcription factor p36.21 Seq+ 95192 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFAP1-SLC45A1 AFAP1 chr4 7800442 - SLC45A1 chr1 8324306 + Exonic hg38 LUSC TCGA-46-3769-01A 8 28 In-Frame Inter-chr p16.1 p36.23 Seq+ 95193 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR146-DTNBP1 GPR146 chr7 1044658 + DTNBP1 chr6 15533395 - Exonic hg38 LUSC TCGA-46-3769-01A 4 3 5'UTR-CDS Inter-chr p22.3 p22.3 Seq+ 95194 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPC6-SMG1 GPC6 chr13 94403556 + SMG1 chr16 18804942 - Exonic hg38 LUSC TCGA-46-3769-01A 3 6 Out-of-frame Inter-chr q31.3 p12.3 Atypical:PIKK Seq+ 95195 ChimerSeq TCGA FAWG TCGA_RNA-Seq ME2-MRO ME2 chr18 50879308 + MRO chr18 50806850 - Exonic hg38 LUSC TCGA-46-3769-01A 2 8 5'UTR-CDS Intra-chr q21.2 q21.2 Seq+ 95196 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP22-CCDC144NL USP22 chr17 21019084 - CCDC144NL chr17 20866703 - Exonic hg38 LUSC TCGA-46-3769-01A 1 12 In-Frame Intra-chr p11.2 p11.2 Seq+ 95197 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELSR1-SEZ6L CELSR1 chr22 46533627 - SEZ6L chr22 26292406 + Exonic hg38 LUSC TCGA-46-6025-01A 137 521 In-Frame Intra-chr q13.31 q12.1 Seq+ 95198 ChimerSeq TCGA FAWG TCGA_RNA-Seq STX5-SNHG1 STX5 chr11 62824166 - SNHG1 chr11 62852839 - Exonic hg38 LUSC TCGA-46-6025-01A 22 177 CDS-3'UTR Intra-chr q12.3 q12.3 Seq+ 95199 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLK1-CREG2 TLK1 chr2 171046174 - CREG2 chr2 101355366 - Exonic hg38 LUSC TCGA-46-6025-01A 10 95 In-Frame Intra-chr q31.1 Other:TLK q11.2 Seq+ 95200 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNAB2-POLB KCNAB2 chr1 5992788 + POLB chr8 42344953 + Exonic hg38 LUSC TCGA-46-6025-01A 10 35 5'UTR-CDS Inter-chr p36.31 p11.21 Seq+ 95201 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB2-TCTEX1D2 GRB2 chr17 75393551 - TCTEX1D2 chr3 196296069 - Exonic hg38 LUSC TCGA-46-6025-01A 13 21 Out-of-frame Inter-chr q25.1 q29 Seq+ 95202 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB2-PCYT1A GRB2 chr17 75393551 - PCYT1A chr3 196270541 - Exonic hg38 LUSC TCGA-46-6025-01A 8 20 CDS-5'UTR Inter-chr q25.1 q29 Seq+ 95203 ChimerSeq TCGA FAWG TCGA_RNA-Seq UQCC1-GDF5 UQCC1 chr20 35411940 - GDF5 chr20 35434783 - Exonic hg38 LUSC TCGA-46-6025-01A 7 20 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 95204 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAPGEF5-MRPS22 RAPGEF5 chr7 22230846 - MRPS22 chr3 139346878 + Exonic hg38 LUSC TCGA-46-6025-01A 3 13 Out-of-frame Inter-chr p15.3 q23 Seq+ 95205 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLG2-DDX5 POLG2 chr17 64492667 - DDX5 chr17 64500326 - Exonic hg38 LUSC TCGA-46-6025-01A 2 15 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 95206 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNDC3B-SPATA16 FNDC3B chr3 172039771 + SPATA16 chr3 172889692 - Exonic hg38 LUSC TCGA-46-6025-01A 3 4 5'UTR-CDS Intra-chr q26.31 q26.31 Seq+ 95207 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFA10-TMEM207 NDUFA10 chr2 240005210 - TMEM207 chr3 190429731 - Exonic hg38 LUSC TCGA-46-6025-01A 1 7 Out-of-frame Inter-chr q28 95208 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD4-B4GALT6 SETD4 chr21 36040575 - B4GALT6 chr18 31666372 - Exonic hg38 LUSC TCGA-46-6025-01A 2 3 Out-of-frame Inter-chr q22.12 q12.1 Seq+ 95209 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAF3IP1-ITSN2 TRAF3IP1 chr2 238329342 + ITSN2 chr2 24275849 - Exonic hg38 LUSC TCGA-46-6025-01A 1 5 In-Frame Intra-chr q37.3 p23.3 95210 ChimerSeq TCGA FAWG TCGA_RNA-Seq PREP-SIM1 PREP chr6 105288758 - SIM1 chr6 100420958 - Exonic hg38 LUSC TCGA-46-6026-01A 16 96 In-Frame Intra-chr q21 q16.3 Transcription factor Seq+ 95211 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIP12-KIF1A TRIP12 chr2 229921880 - KIF1A chr2 240797812 - Exonic hg38 LUSC TCGA-46-6026-01A 6 19 5'UTR-5'UTR Intra-chr q36.3 q37.3 Seq+ 95212 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZSWIM4-SLC1A6 ZSWIM4 chr19 13799921 + SLC1A6 chr19 14972917 - Exonic hg38 LUSC TCGA-46-6026-01A 1 13 CDS-5'UTR Intra-chr p13.13 p13.12 Seq+ 95213 ChimerSeq TCGA FAWG TCGA_RNA-Seq HACE1-ASCC3 HACE1 chr6 104843223 - ASCC3 chr6 100864214 - Exonic hg38 LUSC TCGA-46-6026-01A 1 4 In-Frame Intra-chr q16.3 Tumor suppressor gene q16.3 95214 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXNRD1-GNAS TXNRD1 chr12 104287109 + GNAS chr20 58895612 + Exonic hg38 LUSC TCGA-51-4079-01A 2 1 5'UTR-5'UTR Inter-chr q23.3 q13.32 Oncogene 95215 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM83F-FST FAM83F chr22 40026046 + FST chr5 53486955 + Exonic hg38 LUSC TCGA-51-4081-01A 3 16 Out-of-frame Inter-chr q13.1 q11.2 Seq+ 95216 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNDC3B-SLC7A14 FNDC3B chr3 172039771 + SLC7A14 chr3 170486368 - Exonic hg38 LUSC TCGA-51-6867-01A 78 286 5'UTR-CDS Intra-chr q26.31 q26.2 Seq+ 95217 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFG-TFDP2 TFG chr3 100720058 + TFDP2 chr3 141945038 - Exonic hg38 LUSC TCGA-51-6867-01A 30 101 CDS-3'UTR Intra-chr q12.2 q23 Transcription factor Seq+ 95218 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK2-BDH1 PAK2 chr3 196740157 + BDH1 chr3 197533561 - Exonic hg38 LUSC TCGA-51-6867-01A 8 15 5'UTR-3'UTR Intra-chr q29 STE:STE20 Seq+ 95219 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALT5-ZFP64 B4GALT5 chr20 49713576 - ZFP64 chr20 52153428 - Exonic hg38 LUSC TCGA-51-6867-01A 6 10 In-Frame Intra-chr q13.13 q13.2 Transcription factor Seq+ 95220 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT2-EYS GALNT2 chr1 230067406 + EYS chr6 63726680 - Exonic hg38 LUSC TCGA-51-6867-01A 6 4 Out-of-frame Inter-chr q42.13 q12 Seq+ 95221 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1CB-DRAM1 PPP1CB chr2 28793997 + DRAM1 chr12 102011813 + Exonic hg38 LUSC TCGA-51-6867-01A 3 15 CDS-3'UTR Inter-chr p23.2 q23.2 Seq+ 95222 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPDYA-DRAM1 SPDYA chr2 28793997 + DRAM1 chr12 102011813 + Exonic hg38 LUSC TCGA-51-6867-01A 3 15 Out-of-frame Inter-chr p23.2 q23.2 Seq+ 95223 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPR1-FCGR3A XPR1 chr1 180632270 + FCGR3A chr1 161544958 - Exonic hg38 LUSC TCGA-51-6867-01A 4 8 Out-of-frame Intra-chr q25.3 q23.3 Seq+ 95224 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGF12-LRRC15 FGF12 chr3 192727181 - LRRC15 chr3 194361046 - Exonic hg38 LUSC TCGA-51-6867-01A 1 12 Out-of-frame Intra-chr q29 q29 Seq+ 95225 ChimerSeq TCGA FAWG TCGA_RNA-Seq RYR1-SEMA4A RYR1 chr19 38567917 + SEMA4A chr1 156172826 + Exonic hg38 LUSC TCGA-51-6867-01A 1 4 In-Frame Inter-chr q13.2 q22 95226 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMPK1-TNNT1 CMPK1 chr1 47334116 + TNNT1 chr19 55134156 - Exonic hg38 LUSC TCGA-51-6867-01A 1 1 Out-of-frame Inter-chr p33 Oncogene q13.42 95227 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLIM4-RNF175 GOLIM4 chr3 168095099 - RNF175 chr4 153715662 - Exonic hg38 LUSC TCGA-52-7622-01A 16 50 Out-of-frame Inter-chr q26.2 q31.3 Seq+ 95228 ChimerSeq TCGA FAWG TCGA_RNA-Seq FXR1-KLHL24 FXR1 chr3 180957928 + KLHL24 chr3 183643480 + Exonic hg38 LUSC TCGA-52-7622-01A 2 11 CDS-5'UTR Intra-chr q26.33 q27.1 Seq+ 95229 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1A-ZDHHC18 ARID1A chr1 26732792 + ZDHHC18 chr1 26848608 + Exonic hg38 LUSC TCGA-52-7622-01A 2 6 Out-of-frame Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 95230 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC58-MROH5 LRRC58 chr3 120334862 - MROH5 chr8 141448088 - Exonic hg38 LUSC TCGA-52-7622-01A 1 9 CDS-5'UTR Inter-chr q13.33 95231 ChimerSeq TCGA FAWG TCGA_RNA-Seq RB1-GADD45GIP1 RB1 chr13 48381443 + GADD45GIP1 chr19 12954526 - Exonic hg38 LUSC TCGA-52-7809-01A 7 20 Out-of-frame Inter-chr q14.2 Oncogene Tumor suppressor gene p13.13 Tumor suppressor gene Seq+ 95232 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM33-CSMD2 TRIM33 chr1 114405410 - CSMD2 chr1 33663092 - Exonic hg38 LUSC TCGA-52-7809-01A 3 16 In-Frame Intra-chr p13.2 Oncogene p35.1 Seq+ 95233 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPRE1-TMEM131 MAPRE1 chr20 32846770 + TMEM131 chr2 97927487 - Exonic hg38 LUSC TCGA-52-7809-01A 2 9 Out-of-frame Inter-chr q11.21 q11.2 Seq+ 95234 ChimerSeq TCGA FAWG TCGA_RNA-Seq OXSR1-MYD88 OXSR1 chr3 38190839 + MYD88 chr3 38139864 + Exonic hg38 LUSC TCGA-52-7809-01A 2 6 In-Frame Intra-chr p22.2 p22.2 Oncogene Seq+ 95235 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFR3B-NCAN EFR3B chr2 25091401 + NCAN chr19 19216947 + Exonic hg38 LUSC TCGA-52-7809-01A 1 4 5'UTR-5'UTR Inter-chr p23.3 p13.11 Seq+ 95236 ChimerSeq TCGA FAWG TCGA_RNA-Seq XRN2-TMEM40 XRN2 chr20 21354872 + TMEM40 chr3 12749840 - Exonic hg38 LUSC TCGA-52-7810-01A 8 39 In-Frame Inter-chr p11.22 p25.2 Seq+ 95237 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPF2-CDC42EP2 DPF2 chr11 65333918 + CDC42EP2 chr11 65320544 + Exonic hg38 LUSC TCGA-52-7810-01A 10 14 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 95238 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF15-C19orf57 DCAF15 chr19 13952644 + C19orf57 chr19 13895546 - Exonic hg38 LUSC TCGA-52-7810-01A 7 6 Out-of-frame Intra-chr p13.12 p13.12 Seq+ 95239 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP6-PPIL6 SENP6 chr6 75697517 + PPIL6 chr6 109431345 - Exonic hg38 LUSC TCGA-52-7810-01A 4 11 Out-of-frame Intra-chr q14.1 q21 Seq+ 95240 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHG4B-AHRR PLEKHG4B chr5 151599 + AHRR chr5 343893 + Exonic hg38 LUSC TCGA-52-7810-01A 4 7 Out-of-frame Intra-chr p15.33 p15.33 Tumor suppressor gene Transcription factor Seq+ 95241 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHG4B-PDCD6 PLEKHG4B chr5 151599 + PDCD6 chr5 343893 + Exonic hg38 LUSC TCGA-52-7810-01A 4 7 CDS-3'UTR Intra-chr p15.33 p15.33 Seq+ 95242 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R3A-SPSB4 PPP2R3A chr3 136103376 + SPSB4 chr3 141147142 + Exonic hg38 LUSC TCGA-52-7810-01A 2 12 Out-of-frame Intra-chr q22.2 q23 Seq+ 95243 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL21A1-DST COL21A1 chr6 56168124 - DST chr6 56517620 - Exonic hg38 LUSC TCGA-52-7810-01A 1 12 In-Frame Intra-chr p12.1 p12.1 Oncogene Seq+ 95244 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP32-TP53AIP1 ARHGAP32 chr11 129093621 - TP53AIP1 chr11 128936649 - Exonic hg38 LUSC TCGA-52-7810-01A 2 7 In-Frame Intra-chr q24.3 q24.3 Seq+ 95245 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTSE1-TTC38 GTSE1 chr22 46297479 + TTC38 chr22 46292203 + Exonic hg38 LUSC TCGA-52-7810-01A 1 10 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 95246 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC27-HLF CDC27 chr17 47181562 - HLF chr17 55267751 + Exonic hg38 LUSC TCGA-52-7810-01A 1 1 In-Frame Intra-chr q21.32 q22 Oncogene Tumor suppressor gene Transcription factor 95247 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL5A3-THRAP3 COL5A3 chr19 9980648 - THRAP3 chr1 36296583 + Exonic hg38 LUSC TCGA-52-7811-01A 2 1 In-Frame Inter-chr p13.2 p34.3 95248 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMSAP2-KCNH1 CAMSAP2 chr1 200815644 + KCNH1 chr1 210804166 - Exonic hg38 LUSC TCGA-52-7811-01A 1 4 Out-of-frame Intra-chr q32.1 95249 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSTN-ARPC5 DSTN chr20 17570211 + ARPC5 chr1 183630637 - Exonic hg38 LUSC TCGA-52-7812-01A 16 106 In-Frame Inter-chr p12.1 q25.3 Seq+ 95250 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2C1-COL6A6 ATP2C1 chr3 130930526 + COL6A6 chr3 130675202 + Exonic hg38 LUSC TCGA-52-7812-01A 16 50 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 95251 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHC3-FNDC3B PHC3 chr3 170145423 - FNDC3B chr3 172397164 + Exonic hg38 LUSC TCGA-56-1622-01A 27 112 In-Frame Intra-chr q26.2 Tumor suppressor gene q26.31 Seq+ 95252 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAALADL2-SMC5 NAALADL2 chr3 174864090 + SMC5 chr9 70344144 + Exonic hg38 LUSC TCGA-56-1622-01A 1 4 Out-of-frame Inter-chr q26.31 q21.12 Seq+ 95253 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC20A2-IDO1 SLC20A2 chr8 42501031 - IDO1 chr8 39927830 + Exonic hg38 LUSC TCGA-56-1622-01A 1 2 5'UTR-CDS Intra-chr p11.21 p11.21 95254 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALT4-ACSL5 B4GALT4 chr3 119226809 - ACSL5 chr10 112422325 + Exonic hg38 LUSC TCGA-56-5897-01A 17 53 In-Frame Inter-chr q13.32 q25.2 Seq+ 95255 ChimerSeq TCGA FAWG TCGA_RNA-Seq CIAO1-SERTAD2 CIAO1 chr2 96268658 + SERTAD2 chr2 64636875 - Exonic hg38 LUSC TCGA-56-5897-01A 1 4 CDS-5'UTR Intra-chr q11.2 p14 95256 ChimerSeq TCGA FAWG TCGA_RNA-Seq B3GNT5-ALG3 B3GNT5 chr3 183253472 + ALG3 chr3 184245812 - Exonic hg38 LUSC TCGA-56-5898-01A 32 211 5'UTR-CDS Intra-chr q27.1 q27.1 Seq+ 95257 ChimerSeq TCGA FAWG TCGA_RNA-Seq ECE2-HTR3C ECE2 chr3 184249890 + HTR3C chr3 184059828 + Exonic hg38 LUSC TCGA-56-5898-01A 23 71 5'UTR-CDS Intra-chr q27.1 q27.1 Seq+ 95258 ChimerSeq TCGA FAWG TCGA_RNA-Seq STRADA-LYZ STRADA chr17 63728334 - LYZ chr12 69350108 + Exonic hg38 LUSC TCGA-56-5898-01A 5 61 Out-of-frame Inter-chr q23.3 Tumor suppressor gene q15 Seq+ 95259 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSN-HTR3D MSN chrX 65667853 + HTR3D chr3 184038021 + Exonic hg38 LUSC TCGA-56-5898-01A 1 42 In-Frame Inter-chr q12 q27.1 Seq+ 95260 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCC5-ATP11B ABCC5 chr3 183987770 - ATP11B chr3 182820260 + Exonic hg38 LUSC TCGA-56-5898-01A 7 16 In-Frame Intra-chr q27.1 q26.33 Oncogene Seq+ 95261 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCC5-DCUN1D1 ABCC5 chr3 183987770 - DCUN1D1 chr3 182945173 - Exonic hg38 LUSC TCGA-56-5898-01A 2 22 Out-of-frame Intra-chr q27.1 q26.33 Oncogene Seq+ 95262 ChimerSeq TCGA FAWG TCGA_RNA-Seq UHRF1BP1-OSBPL1A UHRF1BP1 chr6 34792294 + OSBPL1A chr18 24377535 - Exonic hg38 LUSC TCGA-56-5898-01A 4 5 CDS-5'UTR Inter-chr p21.31 q11.2 Seq+ 95263 ChimerSeq TCGA FAWG TCGA_RNA-Seq PJA2-ADGRV1 PJA2 chr5 109409842 - ADGRV1 chr5 91150030 + Exonic hg38 LUSC TCGA-56-6545-01A 296 773 5'UTR-5'UTR Intra-chr q21.3 q14.3 Seq+ 95264 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANK-MNAT1 TANK chr2 161179761 + MNAT1 chr14 60968229 + Exonic hg38 LUSC TCGA-56-6545-01A 45 257 Out-of-frame Inter-chr q24.2 Tumor suppressor gene q23.1 Seq+ 95265 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHKA2-CD99P1 PHKA2 chrX 18905758 - CD99P1 chrY 2637974 + Exonic hg38 LUSC TCGA-56-6545-01A 10 27 CDS-5'UTR Inter-chr p22.13 p22.33 95266 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS15L1-ZNF473 EPS15L1 chr19 16434365 - ZNF473 chr19 50044670 + Exonic hg38 LUSC TCGA-56-6545-01A 8 16 Out-of-frame Intra-chr p13.11 q13.33 Transcription factor Seq+ 95267 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANK-SLC38A6 TANK chr2 161179761 + SLC38A6 chr14 60982508 + Exonic hg38 LUSC TCGA-56-6545-01A 8 14 In-Frame Inter-chr q24.2 Tumor suppressor gene q23.1 Seq+ 95268 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNGT1-CALCR GNGT1 chr7 93591771 + CALCR chr7 93574506 - Exonic hg38 LUSC TCGA-56-6545-01A 1 40 5'UTR-5'UTR Intra-chr q21.3 q21.3 95269 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS17-CERS3 ADAMTS17 chr15 100254136 - CERS3 chr15 100402865 - Exonic hg38 LUSC TCGA-56-6545-01A 2 7 Out-of-frame Intra-chr q26.3 q26.3 Seq+ 95270 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASAH1-WWOX ASAH1 chr8 18069792 - WWOX chr16 79211608 + Exonic hg38 LUSC TCGA-56-6545-01A 3 3 In-Frame Inter-chr p22 q23.1 Tumor suppressor gene 95271 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROBO2-ERLIN2 ROBO2 chr3 77098340 + ERLIN2 chr8 37744571 + Exonic hg38 LUSC TCGA-56-6546-01A 8 32 In-Frame Inter-chr p12.3 p11.23 Seq+ 95272 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTIF-PSTPIP2 CTIF chr18 48539312 + PSTPIP2 chr18 46040047 - Exonic hg38 LUSC TCGA-56-6546-01A 3 9 3'UTR-CDS Intra-chr q21.1 Seq+ 95273 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMCN1-RNF2 HMCN1 chr1 185735047 + RNF2 chr1 185087552 + Exonic hg38 LUSC TCGA-56-6546-01A 1 2 CDS-5'UTR Intra-chr q25.3 q25.3 Oncogene Seq+ 95274 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF18-TECR ARHGEF18 chr19 7470315 + TECR chr19 14562525 + Exonic hg38 LUSC TCGA-56-7221-01A 4 7 3'UTR-CDS Intra-chr p13.2 p13.12 Seq+ 95275 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-LRRC4C PPFIA1 chr11 70272436 + LRRC4C chr11 41223008 - Exonic hg38 LUSC TCGA-56-7221-01A 1 3 5'UTR-5'UTR Intra-chr q13.3 p12 95276 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCCC1-FXR1 MCCC1 chr3 183070999 - FXR1 chr3 180961468 + Exonic hg38 LUSC TCGA-56-7223-01A 32 55 Out-of-frame Intra-chr q27.1 q26.33 Seq+ 95277 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL24-MCF2L2 KLHL24 chr3 183643542 + MCF2L2 chr3 183231212 - Exonic hg38 LUSC TCGA-56-7223-01A 5 98 5'UTR-CDS Intra-chr q27.1 q27.1 Seq+ 95278 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOMER1-DMGDH HOMER1 chr5 79439010 - DMGDH chr5 79063787 - Exonic hg38 LUSC TCGA-56-7223-01A 13 64 In-Frame Intra-chr q14.1 q14.1 Seq+ 95279 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIRREL-PYHIN1 KIRREL chr1 158093762 + PYHIN1 chr1 158941977 + Exonic hg38 LUSC TCGA-56-7223-01A 11 20 Out-of-frame Intra-chr q23.1 q23.1 Tumor suppressor gene Seq+ 95280 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM20C-MKRN1 FAM20C chr7 208976 + MKRN1 chr7 140472011 - Exonic hg38 LUSC TCGA-56-7223-01A 3 8 3'UTR-3'UTR Intra-chr p22.3 q34 95281 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R2-CLDN1 PPP1R2 chr3 195529794 - CLDN1 chr3 190313036 - Exonic hg38 LUSC TCGA-56-7223-01A 1 7 In-Frame Intra-chr q29 q28 Tumor suppressor gene Seq+ 95282 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELF2-ICA1L ELF2 chr4 139060324 - ICA1L chr2 202829016 - Exonic hg38 LUSC TCGA-56-7579-01A 2 17 CDS-5'UTR Inter-chr q31.1 Transcription factor q33.2 Seq+ 95283 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKIL-FNDC3B SKIL chr3 170361429 + FNDC3B chr3 172346327 + Exonic hg38 LUSC TCGA-56-7580-01A 22 507 In-Frame Intra-chr q26.2 Tumor suppressor gene Transcription factor q26.31 Seq+ 95284 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLD1-TNFSF10 PLD1 chr3 171810399 - TNFSF10 chr3 172514998 - Exonic hg38 LUSC TCGA-56-7580-01A 3 9 5'UTR-CDS Intra-chr q26.31 Tumor suppressor gene q26.31 95285 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1217-THNSL1 KIAA1217 chr10 24474060 + THNSL1 chr10 25021742 + Exonic hg38 LUSC TCGA-56-7580-01A 2 7 CDS-5'UTR Intra-chr p12.2 p12.1 95286 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2R2-NFX1 UBE2R2 chr9 33817934 + NFX1 chr9 33366629 + Exonic hg38 LUSC TCGA-56-7580-01A 2 6 In-Frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 95287 ChimerSeq TCGA FAWG TCGA_RNA-Seq CENPF-EGLN1 CENPF chr1 214622281 + EGLN1 chr1 231374099 - Exonic hg38 LUSC TCGA-56-7582-01A 3 2 In-Frame Intra-chr q41 q42.2 Tumor suppressor gene 95288 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNNBIP1-UBE4B CTNNBIP1 chr1 9910095 - UBE4B chr1 10178644 + Exonic hg38 LUSC TCGA-56-7730-01A 28 18 5'UTR-CDS Intra-chr p36.22 Tumor suppressor gene p36.22 Tumor suppressor gene Seq+ 95289 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAALADL2-MCCC1 NAALADL2 chr3 175627386 + MCCC1 chr3 183034077 - Exonic hg38 LUSC TCGA-56-7730-01A 6 29 Out-of-frame Intra-chr q26.31 q27.1 Seq+ 95290 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE4B-PLEKHG5 UBE4B chr1 10033694 + PLEKHG5 chr1 6496569 - Exonic hg38 LUSC TCGA-56-7730-01A 2 8 Out-of-frame Intra-chr p36.22 Tumor suppressor gene p36.31 Oncogene Seq+ 95291 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYNN-NLGN1 MYNN chr3 169779561 + NLGN1 chr3 173807680 + Exonic hg38 LUSC TCGA-56-7730-01A 1 3 In-Frame Intra-chr q26.2 Transcription factor q26.31 Seq+ 95292 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNIK-SPATA16 TNIK chr3 171460007 - SPATA16 chr3 173117749 - Exonic hg38 LUSC TCGA-56-7730-01A 1 2 CDS-5'UTR Intra-chr q26.31 STE:STE20 q26.31 Seq+ 95293 ChimerSeq TCGA FAWG TCGA_RNA-Seq DST-AKAP6 DST chr6 56600069 - AKAP6 chr14 32678311 + Exonic hg38 LUSC TCGA-56-7822-01A 4 8 In-Frame Inter-chr p12.1 Oncogene q12 Seq+ 95294 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARP8-CRYL1 PARP8 chr5 50668125 + CRYL1 chr13 20404741 - Exonic hg38 LUSC TCGA-56-7823-01B 3 129 Out-of-frame Inter-chr q11.1 q12.11 Seq+ 95295 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP11B-FXR1 ATP11B chr3 182793786 + FXR1 chr3 180968051 + Exonic hg38 LUSC TCGA-56-7823-01B 10 48 Out-of-frame Intra-chr q26.33 Oncogene q26.33 Seq+ 95296 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP11A-F7 ATP11A chr13 112785257 + F7 chr13 113113847 + Exonic hg38 LUSC TCGA-56-7823-01B 5 56 Out-of-frame Intra-chr q34 q34 Seq+ 95297 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFDP1-ATP11A TFDP1 chr13 113585849 + ATP11A chr13 112785135 + Exonic hg38 LUSC TCGA-56-7823-01B 2 14 In-Frame Intra-chr q34 Transcription factor q34 Seq+ 95298 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL4A2-CDC16 COL4A2 chr13 110357552 + CDC16 chr13 114262879 + Exonic hg38 LUSC TCGA-56-7823-01B 2 6 Out-of-frame Intra-chr q34 q34 Seq+ 95299 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSTA-CASR CSTA chr3 122337648 + CASR chr3 122275812 + Exonic hg38 LUSC TCGA-56-8082-01A 4 17 In-Frame Intra-chr q21.1 q13.33 Seq+ 95300 ChimerSeq TCGA FAWG TCGA_RNA-Seq B3GALNT2-GNG4 B3GALNT2 chr1 235494681 - GNG4 chr1 235552237 - Exonic hg38 LUSC TCGA-56-8082-01A 1 16 5'UTR-5'UTR Intra-chr 95301 ChimerSeq TCGA FAWG TCGA_RNA-Seq DST-BMP5 DST chr6 56526361 - BMP5 chr6 55794427 - Exonic hg38 LUSC TCGA-56-8082-01A 2 8 Out-of-frame Intra-chr p12.1 Oncogene p12.1 95302 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO1-FGF3 ANO1 chr11 70126195 + FGF3 chr11 69816423 - Exonic hg38 LUSC TCGA-56-8083-01A 14 119 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 95303 ChimerSeq TCGA FAWG TCGA_RNA-Seq UGP2-PLEKHM3 UGP2 chr2 63857936 + PLEKHM3 chr2 207931119 - Exonic hg38 LUSC TCGA-56-8083-01A 11 33 In-Frame Intra-chr p15 q33.3 Seq+ 95304 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP34-ZNF2 USP34 chr2 61222619 - ZNF2 chr2 95176188 + Exonic hg38 LUSC TCGA-56-8083-01A 2 62 CDS-5'UTR Intra-chr p15 q11.1 Transcription factor Seq+ 95305 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKIB1-LMTK2 ANKIB1 chr7 92352642 + LMTK2 chr7 98185051 + Exonic hg38 LUSC TCGA-56-8083-01A 1 19 In-Frame Intra-chr q21.2 q21.3 Seq+ 95306 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGU-ACSS2 PIGU chr20 34637876 - ACSS2 chr20 34913096 + Exonic hg38 LUSC TCGA-56-8201-01A 5 11 In-Frame Intra-chr q11.22 q11.22 Seq+ 95307 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRR12-FLT3LG PRR12 chr19 49601918 + FLT3LG chr19 49480298 + Exonic hg38 LUSC TCGA-56-8304-01A 1 3 Out-of-frame Intra-chr q13.33 Transcription factor q13.33 Seq+ 95308 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHMP4B-EFCAB8 CHMP4B chr20 33811658 + EFCAB8 chr20 32943636 + Exonic hg38 LUSC TCGA-56-8305-01A 3 11 Out-of-frame Intra-chr q11.22 q11.21 95309 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLCN4-TFAP2A CLCN4 chrX 10158551 + TFAP2A chr6 10398705 - Exonic hg38 LUSC TCGA-56-8307-01A 22 78 5'UTR-CDS Inter-chr p22.2 p24.3 Tumor suppressor gene Transcription factor Seq+ 95310 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKAL1-CLCN4 CDKAL1 chr6 20535394 + CLCN4 chrX 10185022 + Exonic hg38 LUSC TCGA-56-8307-01A 7 17 5'UTR-5'UTR Inter-chr p22.3 p22.2 Seq+ 95311 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN1-FOXCUT ATXN1 chr6 16485972 - FOXCUT chr6 1606016 + Exonic hg38 LUSC TCGA-56-8307-01A 4 6 5'UTR-5'UTR Intra-chr p22.3 p25.3 95312 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDLRAD3-FLJ42102 LDLRAD3 chr11 36098461 + FLJ42102 chr11 71389515 - Exonic hg38 LUSC TCGA-56-8308-01A 4 82 CDS-3'UTR Intra-chr p13 q13.4 95313 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPG11-CD9 SPG11 chr15 44648866 - CD9 chr12 6225426 + Exonic hg38 LUSC TCGA-56-8503-01A 10 30 In-Frame Inter-chr q21.1 p13.31 Seq+ 95314 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATRN-TNKS2 ATRN chr20 3584880 + TNKS2 chr10 91812983 + Exonic hg38 LUSC TCGA-56-8503-01A 4 26 In-Frame Inter-chr p13 q23.32 Seq+ 95315 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERC1-MRPL51 ERC1 chr12 991322 + MRPL51 chr12 6492972 - Exonic hg38 LUSC TCGA-56-8622-01A 2 34 5'UTR-CDS Intra-chr p13.31 Seq+ 95316 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2C1-MBNL1 ATP2C1 chr3 130894337 + MBNL1 chr3 152299405 + Exonic hg38 LUSC TCGA-56-8622-01A 1 11 5'UTR-5'UTR Intra-chr q22.1 q25.1 Seq+ 95317 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUS1-CTNNBIP1 PUS1 chr12 131932312 + CTNNBIP1 chr1 9877989 - Exonic hg38 LUSC TCGA-56-8625-01A 2 19 CDS-5'UTR Inter-chr q24.33 p36.22 Tumor suppressor gene Seq+ 95318 ChimerSeq TCGA FAWG TCGA_RNA-Seq HADHB-CENPO HADHB chr2 26277160 + CENPO chr2 24814376 + Exonic hg38 LUSC TCGA-56-8625-01A 1 4 Out-of-frame Intra-chr p23.3 p23.3 95319 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1H-C12orf66 PPM1H chr12 62934492 - C12orf66 chr12 64215963 - Exonic hg38 LUSC TCGA-56-8625-01A 1 3 Out-of-frame Intra-chr q14.2 q14.2 Seq+ 95320 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP2M1-MAP3K13 AP2M1 chr3 184180984 + MAP3K13 chr3 185328624 + Exonic hg38 LUSC TCGA-56-8628-01A 112 637 CDS-5'UTR Intra-chr q27.1 q27.2 Seq+ 95321 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIX-WDR26 NFIX chr19 13025552 + WDR26 chr1 224394013 - Exonic hg38 LUSC TCGA-56-8628-01A 5 15 In-Frame Inter-chr p13.13 Transcription factor q42.12 Seq+ 95322 ChimerSeq TCGA FAWG TCGA_RNA-Seq DVL3-VPS8 DVL3 chr3 184170729 + VPS8 chr3 184862897 + Exonic hg38 LUSC TCGA-56-8628-01A 3 16 In-Frame Intra-chr q27.1 q27.2 Seq+ 95323 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF40-IL21R RNF40 chr16 30763559 + IL21R chr16 27430056 + Exonic hg38 LUSC TCGA-56-8629-01A 2 22 Out-of-frame Intra-chr p11.2 p12.1 Oncogene Seq+ 95324 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARVB-ATP6V1D PARVB chr22 44024451 + ATP6V1D chr14 67353040 - Exonic hg38 LUSC TCGA-56-8629-01A 1 8 Out-of-frame Inter-chr q13.31 q23.3 Seq+ 95325 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRTG-DPH6 PRTG chr15 55679286 - DPH6 chr15 35542507 - Exonic hg38 LUSC TCGA-56-8629-01A 1 7 In-Frame Intra-chr q21.3 q14 95326 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEC-HMGCLL1 TEC chr4 48228477 - HMGCLL1 chr6 55439559 - Exonic hg38 LUSC TCGA-56-A49D-01A 3 11 In-Frame Inter-chr p11 TK:Tec Tumor suppressor gene p12.1 Seq+ 95327 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK1-RNF38 ROCK1 chr18 21110818 - RNF38 chr9 36376127 - Exonic hg38 LUSC TCGA-56-A49D-01A 2 12 In-Frame Inter-chr q11.1 AGC:DMPK p13.2 Seq+ 95328 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNE-ROCK1 GNE chr9 36236832 - ROCK1 chr18 21070613 - Exonic hg38 LUSC TCGA-56-A49D-01A 2 6 Out-of-frame Inter-chr p13.3 q11.1 AGC:DMPK Seq+ 95329 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAIAP2L1-ANKIB1 BAIAP2L1 chr7 98400802 - ANKIB1 chr7 92294889 + Exonic hg38 LUSC TCGA-56-A4BW-01A 18 15 CDS-5'UTR Intra-chr q22.1 q21.2 Seq+ 95330 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE4B-PDPN UBE4B chr1 10168270 + PDPN chr1 13607173 + Exonic hg38 LUSC TCGA-56-A4BW-01A 1 10 Out-of-frame Intra-chr p36.22 Tumor suppressor gene p36.21 Seq+ 95331 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK1-LNP1 PAK1 chr11 77473552 - LNP1 chr3 100429697 + Exonic hg38 LUSC TCGA-56-A4BX-01A 17 52 5'UTR-5'UTR Inter-chr q14.1 STE:STE20 q12.2 Seq+ 95332 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS8-NLGN1 VPS8 chr3 185024389 + NLGN1 chr3 173604279 + Exonic hg38 LUSC TCGA-56-A4BX-01A 7 43 5'UTR-5'UTR Intra-chr q27.2 q26.31 Seq+ 95333 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2F2-GPALPP1 GTF2F2 chr13 45151831 + GPALPP1 chr13 45004305 + Exonic hg38 LUSC TCGA-56-A4BX-01A 6 16 In-Frame Intra-chr q14.12 q14.12 Seq+ 95334 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1XR1-AS2 TBL1XR1 chr3 177197121 - AS2 chr3 179901926 + Exonic hg38 LUSC TCGA-56-A4BX-01A 7 10 Out-of-frame Intra-chr q26.32 95335 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2F2-RSF1 GTF2F2 chr13 45151831 + RSF1 chr11 77702495 - Exonic hg38 LUSC TCGA-56-A4BX-01A 4 13 In-Frame Inter-chr q14.12 q14.1 Seq+ 95336 ChimerSeq TCGA FAWG TCGA_RNA-Seq GFM1-KLHL6 GFM1 chr3 158684668 + KLHL6 chr3 183508508 - Exonic hg38 LUSC TCGA-56-A4BX-01A 4 7 Out-of-frame Intra-chr q25.32 q27.1 95337 ChimerSeq TCGA FAWG TCGA_RNA-Seq YEATS2-GNB4 YEATS2 chr3 183718592 + GNB4 chr3 179426242 - Exonic hg38 LUSC TCGA-56-A4BX-01A 2 11 CDS-5'UTR Intra-chr q27.1 q26.33 Seq+ 95338 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL24-B3GNT5 KLHL24 chr3 183635793 + B3GNT5 chr3 183287605 + Exonic hg38 LUSC TCGA-56-A4BY-01A 268 1696 5'UTR-3'UTR Intra-chr q27.1 q27.1 95339 ChimerSeq TCGA FAWG TCGA_RNA-Seq YEATS2-ATP11B YEATS2 chr3 183777700 + ATP11B chr3 182872356 + Exonic hg38 LUSC TCGA-56-A4BY-01A 178 1006 In-Frame Intra-chr q27.1 q26.33 Oncogene Seq+ 95340 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-TCAP ERBB2 chr17 39716605 + TCAP chr17 39665716 + Exonic hg38 LUSC TCGA-56-A4BY-01A 13 91 Out-of-frame Intra-chr q12 Oncogene q12 Seq+ 95341 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC6C-PHACTR1 TNRC6C chr17 78005079 + PHACTR1 chr6 13287063 + Exonic hg38 LUSC TCGA-56-A4BY-01A 1 5 5'UTR-CDS Inter-chr q25.3 Seq+ 95342 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBD4-TMCC1 MBD4 chr3 129432503 - TMCC1 chr3 129671264 - Exonic hg38 LUSC TCGA-56-A4BY-01A 1 2 In-Frame Intra-chr q21.3 Tumor suppressor gene Transcription factor q22.1 95343 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCID2-ATP4B PCID2 chr13 113208599 - ATP4B chr13 113654942 - Exonic hg38 LUSC TCGA-56-A4ZK-01A 644 1567 Out-of-frame Intra-chr q34 q34 Seq+ 95344 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUL4A-TMEM255B CUL4A chr13 113243045 + TMEM255B chr13 113799339 + Exonic hg38 LUSC TCGA-56-A4ZK-01A 19 106 Out-of-frame Intra-chr q34 Seq+ 95345 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDIA5-OR7E29P PDIA5 chr3 123092442 + OR7E29P chr3 125712183 + Exonic hg38 LUSC TCGA-56-A4ZK-01A 19 31 Out-of-frame Intra-chr q21.1 Seq+ 95346 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPCAT4-MTMR10 LPCAT4 chr15 34361206 - MTMR10 chr15 30939493 - Exonic hg38 LUSC TCGA-56-A4ZK-01A 3 42 Out-of-frame Intra-chr q14 q13.3 Seq+ 95347 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC22A-TXNRD3 SEC22A chr3 123225297 + TXNRD3 chr3 126634051 - Exonic hg38 LUSC TCGA-56-A4ZK-01A 5 34 In-Frame Intra-chr q21.1 q21.3 Seq+ 95348 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHAMP1-UNC79 CHAMP1 chr13 114314643 + UNC79 chr14 93637216 + Exonic hg38 LUSC TCGA-56-A4ZK-01A 1 20 5'UTR-3'UTR Inter-chr q34 Transcription factor Seq+ 95349 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMYD2-PGBD2 SMYD2 chr1 214281427 + PGBD2 chr1 248913816 + Exonic hg38 LUSC TCGA-56-A4ZK-01A 3 8 CDS-5'UTR Intra-chr q32.3 q44 Seq+ 95350 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMUB1-AGAP3 TMUB1 chr7 151082175 - AGAP3 chr7 151128580 + Exonic hg38 LUSC TCGA-56-A4ZK-01A 3 8 Out-of-frame Intra-chr q36.1 q36.1 Seq+ 95351 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFDP1-ATP4B TFDP1 chr13 113611062 + ATP4B chr13 113654942 - Exonic hg38 LUSC TCGA-56-A4ZK-01A 2 7 In-Frame Intra-chr q34 Transcription factor q34 Seq+ 95352 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCID2-GRTP1 PCID2 chr13 113208599 - GRTP1 chr13 113363910 - Exonic hg38 LUSC TCGA-56-A4ZK-01A 1 2 Out-of-frame Intra-chr q34 q34 95353 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCF2L-F10 MCF2L chr13 113066170 + F10 chr13 113148916 + Exonic hg38 LUSC TCGA-56-A4ZK-01A 1000 1000 Out-of-frame Intra-chr q34 q34 Seq+ 95354 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFEB-MDFI TFEB chr6 41735350 - MDFI chr6 41649619 + Exonic hg38 LUSC TCGA-56-A5DR-01A 2 35 5'UTR-CDS Intra-chr p21.1 Transcription factor p21.1 Seq+ 95355 ChimerSeq TCGA FAWG TCGA_RNA-Seq SREBF2-RNF214 SREBF2 chr22 41885011 + RNF214 chr11 117279908 + Exonic hg38 LUSC TCGA-56-A5DR-01A 2 14 Out-of-frame Inter-chr q13.2 Transcription factor q23.3 Seq+ 95356 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2D-DDX23 KMT2D chr12 49024578 - DDX23 chr12 48845782 - Exonic hg38 LUSC TCGA-56-A62T-01A 7 11 CDS-5'UTR Intra-chr q13.12 Oncogene q13.12 95357 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRC2-VMP1 MRC2 chr17 62674170 + VMP1 chr17 59839768 + Exonic hg38 LUSC TCGA-58-8386-01A 36 165 In-Frame Intra-chr q23.2 q23.1 Seq+ 95358 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAPGEF1-MCU RAPGEF1 chr9 131739770 - MCU chr10 72834359 + Exonic hg38 LUSC TCGA-58-8386-01A 3 12 Out-of-frame Inter-chr q34.13 q22.1 Seq+ 95359 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB11FIP3-RGS11 RAB11FIP3 chr16 491268 + RGS11 chr16 275498 - Exonic hg38 LUSC TCGA-58-8386-01A 1 19 3'UTR-CDS Intra-chr p13.3 Seq+ 95360 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC61A2-CAMK1D SEC61A2 chr10 12136170 + CAMK1D chr10 12760948 + Exonic hg38 LUSC TCGA-58-8388-01A 3 12 Out-of-frame Intra-chr p14 p13 Seq+ 95361 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBRS-ZNF689 FBRS chr16 30662859 + ZNF689 chr16 30623869 - Exonic hg38 LUSC TCGA-58-8390-01A 3 9 CDS-5'UTR Intra-chr p11.2 p11.2 Transcription factor Seq+ 95362 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-CTTN ERBB2 chr17 39715939 + CTTN chr11 70422940 + Exonic hg38 LUSC TCGA-58-8391-01A 1 3 In-Frame Inter-chr q12 Oncogene q13.3 Seq+ 95363 ChimerSeq TCGA FAWG TCGA_RNA-Seq MFSD2A-SLC5A9 MFSD2A chr1 39958825 + SLC5A9 chr1 48237679 + Exonic hg38 LUSC TCGA-58-8392-01A 6 16 In-Frame Intra-chr p34.2 Tumor suppressor gene p33 Seq+ 95364 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGD-NTSR1 PGD chr1 10399704 + NTSR1 chr20 62754685 + Exonic hg38 LUSC TCGA-58-A46K-01A 7 60 In-Frame Inter-chr p36.22 q13.33 Seq+ 95365 ChimerSeq TCGA FAWG TCGA_RNA-Seq MREG-ARL4D MREG chr2 215996306 - ARL4D chr17 43399661 + Exonic hg38 LUSC TCGA-58-A46K-01A 1 10 CDS-5'UTR Inter-chr q35 q21.31 Seq+ 95366 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCKAP5L-PRKAG1 NCKAP5L chr12 49828322 - PRKAG1 chr12 49013110 - Exonic hg38 LUSC TCGA-58-A46K-01A 1 6 5'UTR-5'UTR Intra-chr q13.12 q13.12 95367 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPM1-PSMD10P1 DPM1 chr20 50955186 - PSMD10P1 chr20 50913775 + Exonic hg38 LUSC TCGA-58-A46L-01A 3 8 Out-of-frame Intra-chr q13.13 q13.13 Seq+ 95368 ChimerSeq TCGA FAWG TCGA_RNA-Seq C3orf52-CD86 C3orf52 chr3 112102965 + CD86 chr3 122118048 + Exonic hg38 LUSC TCGA-58-A46L-01A 1 7 3'UTR-CDS Intra-chr q13.2 q13.33 Seq+ 95369 ChimerSeq TCGA FAWG TCGA_RNA-Seq YEATS2-ABCC5 YEATS2 chr3 183762279 + ABCC5 chr3 184001251 - Exonic hg38 LUSC TCGA-58-A46L-01A 1 1 CDS-5'UTR Intra-chr q27.1 q27.1 95370 ChimerSeq TCGA FAWG TCGA_RNA-Seq RB1-CNIH3 RB1 chr13 48307406 + CNIH3 chr1 224680958 + Exonic hg38 LUSC TCGA-60-2695-01A 14 49 In-Frame Inter-chr q14.2 Oncogene Tumor suppressor gene q42.12 Seq+ 95371 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBX1-HOXB8 CBX1 chr17 48101268 - HOXB8 chr17 48613506 - Exonic hg38 LUSC TCGA-60-2695-01A 1 11 5'UTR-CDS Intra-chr q21.32 q21.32 Transcription factor 95372 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSI2-AKAP1 MSI2 chr17 57529724 + AKAP1 chr17 57105441 + Exonic hg38 LUSC TCGA-60-2695-01A 1 9 CDS-5'UTR Intra-chr q22 q22 Seq+ 95373 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBNL1-DCUN1D1 MBNL1 chr3 152300367 + DCUN1D1 chr3 182965753 - Exonic hg38 LUSC TCGA-60-2696-01A 6 55 In-Frame Intra-chr q25.1 q26.33 Oncogene Seq+ 95374 ChimerSeq TCGA FAWG TCGA_RNA-Seq STX16-GNAS STX16 chr20 58670603 + GNAS chr20 58888549 + Exonic hg38 LUSC TCGA-60-2696-01A 10 37 5'UTR-5'UTR Intra-chr q13.32 q13.32 Oncogene Seq+ 95375 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED20-TLL2 MED20 chr6 41916785 - TLL2 chr10 96480459 - Exonic hg38 LUSC TCGA-60-2698-01A 5 26 In-Frame Inter-chr p21.1 q24.1 Seq+ 95376 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZSWIM4-CCDC130 ZSWIM4 chr19 13819492 + CCDC130 chr19 13754289 + Exonic hg38 LUSC TCGA-60-2703-01A 1 9 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 95377 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL1A1-BGN COL1A1 chr17 50191788 - BGN chrX 153505863 + Exonic hg38 LUSC TCGA-60-2703-01A 2 4 In-Frame Inter-chr q21.33 Oncogene q28 Seq+ 95378 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCBLD2-KALRN DCBLD2 chr3 98849461 - KALRN chr3 124474663 + Exonic hg38 LUSC TCGA-60-2704-01A 2 3 Out-of-frame Intra-chr q12.1 q21.1 Seq+ 95379 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPD-NF1 CPD chr17 30439077 + NF1 chr17 31349120 + Exonic hg38 LUSC TCGA-60-2704-01A 1 3 In-Frame Intra-chr q11.2 Tumor suppressor gene q11.2 Oncogene Tumor suppressor gene 95380 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCNX1-TTC9 PCNX1 chr14 70908003 + TTC9 chr14 70667564 + Exonic hg38 LUSC TCGA-60-2706-01A 4 30 Out-of-frame Intra-chr q24.2 q24.2 95381 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXO1-ELF1 FOXO1 chr13 40665583 - ELF1 chr13 40959016 - Exonic hg38 LUSC TCGA-60-2706-01A 6 13 In-Frame Intra-chr q14.11 Oncogene Tumor suppressor gene Transcription factor q14.11 Transcription factor Seq+ 95382 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSH6-TEKT4P2 MSH6 chr2 47783493 + TEKT4P2 chr21 9127547 - Exonic hg38 LUSC TCGA-60-2706-01A 6 11 CDS-3'UTR Inter-chr p16.3 Oncogene p11.2 Seq+ 95383 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM12B-RSPO2 RBM12B chr8 93740629 - RSPO2 chr8 107989244 - Exonic hg38 LUSC TCGA-60-2706-01A 2 26 5'UTR-5'UTR Intra-chr q22.1 q23.1 Seq+ 95384 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF557-SIGLECL1 ZNF557 chr19 7076507 + SIGLECL1 chr19 51268571 + Exonic hg38 LUSC TCGA-60-2706-01A 4 13 Out-of-frame Intra-chr p13.2 Transcription factor q13.41 Seq+ 95385 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABRACL-MAP3K5 ABRACL chr6 139028875 + MAP3K5 chr6 136720589 - Exonic hg38 LUSC TCGA-60-2706-01A 3 13 5'UTR-CDS Intra-chr q24.1 q23.3 STE:STE11 Seq+ 95386 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM65-SRP68 TRIM65 chr17 75891813 - SRP68 chr17 76057543 - Exonic hg38 LUSC TCGA-60-2706-01A 3 8 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 95387 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF19A-TRIQK RNF19A chr8 100287501 - TRIQK chr8 92917010 - Exonic hg38 LUSC TCGA-60-2706-01A 3 7 CDS-5'UTR Intra-chr q22.2 q22.1 Seq+ 95388 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD11-RHOT1 PSMD11 chr17 32454619 + RHOT1 chr17 32253085 + Exonic hg38 LUSC TCGA-60-2706-01A 2 9 CDS-3'UTR Intra-chr q11.2 q11.2 Seq+ 95389 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPX2-EYS TPX2 chr20 31760179 + EYS chr6 64082002 - Exonic hg38 LUSC TCGA-60-2706-01A 2 5 In-Frame Inter-chr q11.21 q12 Seq+ 95390 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERP29-NHSL1 ERP29 chr12 112013609 + NHSL1 chr6 138572061 - Exonic hg38 LUSC TCGA-60-2706-01A 1 5 CDS-5'UTR Inter-chr q24.13 q24.1 95391 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF557-ZNF714 ZNF557 chr19 7076506 + ZNF714 chr19 21083977 + Exonic hg38 LUSC TCGA-60-2706-01A 1000 1000 Out-of-frame Intra-chr p13.2 Transcription factor p12 Transcription factor 95392 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC20A2-ZMAT4 SLC20A2 chr8 42501031 - ZMAT4 chr8 40532238 - Exonic hg38 LUSC TCGA-60-2708-01A 28 83 5'UTR-CDS Intra-chr p11.21 p11.21 Transcription factor Seq+ 95393 ChimerSeq TCGA FAWG TCGA_RNA-Seq DERA-MGST1 DERA chr12 15962947 + MGST1 chr12 16589528 + Exonic hg38 LUSC TCGA-60-2708-01A 6 3 CDS-3'UTR Intra-chr p12.3 p12.3 Seq+ 95394 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMC1A-UBQLN2 SMC1A chrX 53404992 - UBQLN2 chrX 56564789 + Exonic hg38 LUSC TCGA-60-2709-01A 8 43 Out-of-frame Intra-chr p11.22 p11.21 Seq+ 95395 ChimerSeq TCGA FAWG TCGA_RNA-Seq FARP1-GPC6 FARP1 chr13 98385814 + GPC6 chr13 93830154 + Exonic hg38 LUSC TCGA-60-2709-01A 2 2 Out-of-frame Intra-chr q32.2 q31.3 Seq+ 95396 ChimerSeq TCGA FAWG TCGA_RNA-Seq ECT2-KALRN ECT2 chr3 172774022 + KALRN chr3 124347143 + Exonic hg38 LUSC TCGA-60-2710-01A 8 23 In-Frame Intra-chr q26.31 Tumor suppressor gene q21.1 Seq+ 95397 ChimerSeq TCGA FAWG TCGA_RNA-Seq OXSR1-SLC22A14 OXSR1 chr3 38165946 + SLC22A14 chr3 38306304 + Exonic hg38 LUSC TCGA-60-2710-01A 1 15 Out-of-frame Intra-chr p22.2 p22.2 95398 ChimerSeq TCGA FAWG TCGA_RNA-Seq ME1-UBE3D ME1 chr6 83346173 - UBE3D chr6 82893042 - Exonic hg38 LUSC TCGA-60-2710-01A 1 12 In-Frame Intra-chr q14.2 q14.1 Seq+ 95399 ChimerSeq TCGA FAWG TCGA_RNA-Seq RABEP1-RPAIN RABEP1 chr17 5308822 + RPAIN chr17 5421296 + Exonic hg38 LUSC TCGA-60-2711-01A 10 30 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 95400 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1L-B3GNT5 PPM1L chr3 160756707 + B3GNT5 chr3 183287605 + Exonic hg38 LUSC TCGA-60-2711-01A 3 15 CDS-3'UTR Intra-chr q25.33 Tumor suppressor gene q27.1 Seq+ 95401 ChimerSeq TCGA FAWG TCGA_RNA-Seq DST-TRIM38 DST chr6 56843055 - TRIM38 chr6 25963049 + Exonic hg38 LUSC TCGA-60-2711-01A 1 15 CDS-5'UTR Intra-chr p12.1 Oncogene p22.2 Seq+ 95402 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF200-COLEC12 ZNF200 chr16 3232421 - COLEC12 chr18 480757 - Exonic hg38 LUSC TCGA-60-2712-01A 5 9 In-Frame Inter-chr p13.3 Transcription factor p11.32 Seq+ 95403 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK19-FAM96B CDK19 chr6 110746126 - FAM96B chr16 66933739 - Exonic hg38 LUSC TCGA-60-2712-01A 2 2 Out-of-frame Inter-chr q21 q22.1 95404 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSCP1-OT OSCP1 chr1 36432422 - OT chr3 181715185 + Exonic hg38 LUSC TCGA-60-2713-01A 19 130 Out-of-frame Inter-chr p34.3 Tumor suppressor gene 95405 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSCP1-SOX2OT_exon4 OSCP1 chr1 36432422 - SOX2OT_exon4 chr3 181715185 + Exonic hg38 LUSC TCGA-60-2713-01A 19 44 Out-of-frame Inter-chr p34.3 Tumor suppressor gene q26.33 95406 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF41-ANKRD52 RNF41 chr12 56213958 - ANKRD52 chr12 56245596 - Exonic hg38 LUSC TCGA-60-2713-01A 1 2 In-Frame Intra-chr q13.3 q13.3 95407 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREBBP-HCN1 CREBBP chr16 3850297 - HCN1 chr5 45645608 - Exonic hg38 LUSC TCGA-60-2714-01A 4 64 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene p12 Seq+ 95408 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC20A2-FBXW7 SLC20A2 chr8 42540915 - FBXW7 chr4 152326231 - Exonic hg38 LUSC TCGA-60-2714-01A 1 14 5'UTR-CDS Inter-chr p11.21 q31.3 Oncogene Tumor suppressor gene Seq+ 95409 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC31A-SCD5 SEC31A chr4 82874611 - SCD5 chr4 82705413 - Exonic hg38 LUSC TCGA-60-2714-01A 2 2 Out-of-frame Intra-chr q21.22 q21.22 Seq+ 95410 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEX13-CHMP3 PEX13 chr2 61017851 + CHMP3 chr2 86510479 - Exonic hg38 LUSC TCGA-60-2715-01A 112 614 Out-of-frame Intra-chr p15 p11.2 Seq+ 95411 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKN2A-SRGAP2 CDKN2A chr9 21994139 - SRGAP2 chr1 206461037 + Exonic hg38 LUSC TCGA-60-2715-01A 21 114 Out-of-frame Inter-chr p21.3 Oncogene Tumor suppressor gene q32.1 Tumor suppressor gene Seq+ 95412 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSL1-SHANK2 MSL1 chr17 40123380 + SHANK2 chr11 70896567 - Exonic hg38 LUSC TCGA-60-2715-01A 13 42 In-Frame Inter-chr q21.1 q13.4 Seq+ 95413 ChimerSeq TCGA FAWG TCGA_RNA-Seq KATNBL1-EMC7 KATNBL1 chr15 34209951 - EMC7 chr15 34096014 - Exonic hg38 LUSC TCGA-60-2715-01A 1 31 5'UTR-CDS Intra-chr q14 q14 Seq+ 95414 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBBP8-ANXA4 RBBP8 chr18 22949713 + ANXA4 chr2 69781520 + Exonic hg38 LUSC TCGA-60-2715-01A 3 17 CDS-5'UTR Inter-chr q11.2 Tumor suppressor gene p13.3 Seq+ 95415 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXN2-SPTBN1 FOXN2 chr2 48346751 + SPTBN1 chr2 54622300 + Exonic hg38 LUSC TCGA-60-2715-01A 3 10 In-Frame Intra-chr p16.3 Transcription factor p16.2 Tumor suppressor gene Seq+ 95416 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP10-MSL1 LRP10 chr14 22877053 + MSL1 chr17 40126183 + Exonic hg38 LUSC TCGA-60-2715-01A 2 11 In-Frame Inter-chr q11.2 q21.1 Seq+ 95417 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-GRB7 FBXL20 chr17 39402173 - GRB7 chr17 39742252 + Exonic hg38 LUSC TCGA-60-2715-01A 3 3 Out-of-frame Intra-chr q12 q12 Seq+ 95418 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM3A-PUS10 KDM3A chr2 86491275 + PUS10 chr2 61011905 - Exonic hg38 LUSC TCGA-60-2715-01A 1 8 CDS-5'UTR Intra-chr p11.2 Tumor suppressor gene p15 Seq+ 95419 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC27-SPAST TTC27 chr2 32678922 + SPAST chr2 32141904 + Exonic hg38 LUSC TCGA-60-2715-01A 1 3 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 95420 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD3-NUTM1 NSD3 chr8 38326730 - NUTM1 chr15 34347969 + Exonic hg38 LUSC TCGA-60-2716-01A 41 160 In-Frame Inter-chr p11.23 Tumor suppressor gene q14 KB Pub 95421 ChimerSeq TCGA FAWG TCGA_RNA-Seq PELP1-CHRNE PELP1 chr17 4676357 - CHRNE chr17 4902763 - Exonic hg38 LUSC TCGA-60-2719-01A 1 11 In-Frame Intra-chr p13.2 p13.2 Seq+ 95422 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNMBP-TPTE2 DNMBP chr10 100009838 - TPTE2 chr13 19438153 - Exonic hg38 LUSC TCGA-60-2720-01A 5 11 5'UTR-CDS Inter-chr q24.2 q12.11 Tumor suppressor gene Seq+ 95423 ChimerSeq TCGA FAWG TCGA_RNA-Seq PNRC2-BSDC1 PNRC2 chr1 23961134 + BSDC1 chr1 32376741 - Exonic hg38 LUSC TCGA-60-2721-01A 5 66 5'UTR-CDS Intra-chr p36.11 p35.1 Seq+ 95424 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBOAT7-TARM1 MBOAT7 chr19 54178765 - TARM1 chr19 54070160 - Exonic hg38 LUSC TCGA-60-2721-01A 1 1 5'UTR-5'UTR Intra-chr 95425 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0100-ALKBH5 KIAA0100 chr17 28643610 - ALKBH5 chr17 18206815 + Exonic hg38 LUSC TCGA-60-2722-01A 18 198 In-Frame Intra-chr q11.2 p11.2 Seq+ 95426 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARL4D-DNAJC7 ARL4D chr17 43399093 + DNAJC7 chr17 41983636 - Exonic hg38 LUSC TCGA-60-2722-01A 3 10 5'UTR-CDS Intra-chr q21.31 q21.2 Seq+ 95427 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNQ5-DST KCNQ5 chr6 72622587 + DST chr6 56477488 - Exonic hg38 LUSC TCGA-60-2722-01A 2 6 Out-of-frame Intra-chr q13 p12.1 Oncogene Seq+ 95428 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNA13-CCDC171 GNA13 chr17 65053502 - CCDC171 chr9 15846702 + Exonic hg38 LUSC TCGA-60-2722-01A 2 4 In-Frame Inter-chr q24.1 p22.3 95429 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGB4-OTOP2 ITGB4 chr17 75721563 + OTOP2 chr17 74930279 + Exonic hg38 LUSC TCGA-60-2722-01A 1 8 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 95430 ChimerSeq TCGA FAWG TCGA_RNA-Seq THTPA-IGHJ5 THTPA chr14 23556470 + IGHJ5 chr14 105863860 - Exonic hg38 LUSC TCGA-60-2723-01A 12 0 Out-of-frame Intra-chr q11.2 Seq+ 95431 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1H-TSPAN8 PPM1H chr12 62934492 - TSPAN8 chr12 71441587 - Exonic hg38 LUSC TCGA-60-2723-01A 1 3 CDS-5'UTR Intra-chr q14.2 q21.1 95432 ChimerSeq TCGA FAWG TCGA_RNA-Seq RABEP1-PIGL RABEP1 chr17 5354490 + PIGL chr17 16299888 + Exonic hg38 LUSC TCGA-60-2724-01A 4 8 Out-of-frame Intra-chr p13.2 p11.2 Seq+ 95433 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK3-VSIG10 TAOK3 chr12 118372648 - VSIG10 chr12 118082429 - Exonic hg38 LUSC TCGA-60-2724-01A 4 8 5'UTR-CDS Intra-chr q24.23 q24.23 Seq+ 95434 ChimerSeq TCGA FAWG TCGA_RNA-Seq WARS2-PHGDH WARS2 chr1 119076350 - PHGDH chr1 119721170 + Exonic hg38 LUSC TCGA-60-2725-01A 2 11 In-Frame Intra-chr p12 p12 Seq+ 95435 ChimerSeq TCGA FAWG TCGA_RNA-Seq REL-MAN1A2 REL chr2 60920642 + MAN1A2 chr1 117493147 + Exonic hg38 LUSC TCGA-60-2726-01A 2 9 In-Frame Inter-chr p16.1 Oncogene Transcription factor p12 Seq+ 95436 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNASEH2A-BEST2 RNASEH2A chr19 12807506 + BEST2 chr19 12757651 + Exonic hg38 LUSC TCGA-63-5128-01A 10 49 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 95437 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSMD1-C15orf41 CSMD1 chr8 4994332 - C15orf41 chr15 36808324 + Exonic hg38 LUSC TCGA-63-5131-01A 27 80 In-Frame Inter-chr p23.2 Tumor suppressor gene q14 Seq+ 95438 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPSB1-RANBP1 SPSB1 chr1 9368196 + RANBP1 chr22 20127156 + Exonic hg38 LUSC TCGA-63-5131-01A 7 27 Out-of-frame Inter-chr p36.22 q11.21 Seq+ 95439 ChimerSeq TCGA FAWG TCGA_RNA-Seq OXCT1-TMEM17 OXCT1 chr5 41870281 - TMEM17 chr2 62502794 - Exonic hg38 LUSC TCGA-63-5131-01A 2 6 Out-of-frame Inter-chr p13.1 p15 Seq+ 95440 ChimerSeq TCGA FAWG TCGA_RNA-Seq UQCR10-KALRN UQCR10 chr22 29767548 + KALRN chr3 124413470 + Exonic hg38 LUSC TCGA-63-5131-01A 1 4 In-Frame Inter-chr q12.2 q21.1 95441 ChimerSeq TCGA FAWG TCGA_RNA-Seq HECTD4-BRAP HECTD4 chr12 112162283 - BRAP chr12 111642692 - Exonic hg38 LUSC TCGA-63-6202-01A 12 54 Out-of-frame Intra-chr q24.13 q24.12 Seq+ 95442 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB40-TCEA3 ZBTB40 chr1 22452004 + TCEA3 chr1 23397955 - Exonic hg38 LUSC TCGA-63-6202-01A 5 58 5'UTR-5'UTR Intra-chr p36.12 Transcription factor Seq+ 95443 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAZ1A-RNF115 BAZ1A chr14 34874492 - RNF115 chr1 145788966 - Exonic hg38 LUSC TCGA-63-6202-01A 7 30 Out-of-frame Inter-chr q13.2 q21.1 Seq+ 95444 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC6-FFAR4 EXOC6 chr10 92834824 + FFAR4 chr10 93587220 + Exonic hg38 LUSC TCGA-63-7021-01A 2 36 Out-of-frame Intra-chr q23.33 q23.33 Seq+ 95445 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF11-FFAR4 KIF11 chr10 92639900 + FFAR4 chr10 93587220 + Exonic hg38 LUSC TCGA-63-7021-01A 2 9 Out-of-frame Intra-chr q23.33 q23.33 Seq+ 95446 ChimerSeq TCGA FAWG TCGA_RNA-Seq YES1-METTL4 YES1 chr18 751705 - METTL4 chr18 2567654 - Exonic hg38 LUSC TCGA-63-7021-01A 1 2 CDS-5'UTR Intra-chr p11.32 p11.32 95447 ChimerSeq TCGA FAWG TCGA_RNA-Seq HGSNAT-GPAT4 HGSNAT chr8 43169242 + GPAT4 chr8 41609416 + Exonic hg38 LUSC TCGA-63-7022-01A 3 10 In-Frame Intra-chr p11.21 p11.21 95448 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERG-MAPK11 ERG chr21 38575662 - MAPK11 chr22 50267949 - Exonic hg38 LUSC TCGA-63-7022-01A 3 3 Out-of-frame Inter-chr q22.2 Oncogene Transcription factor q13.33 95449 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806934 + TACC3 chr4 1744518 + Exonic hg38 LUSC TCGA-63-7022-01A 1 2 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 95450 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-MARCH10 BCAS3 chr17 60947352 + 2019_ 3_ 10_ chr17 62760006 - Exonic hg38 LUSC TCGA-63-7023-01A 19 99 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 95451 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARK2-LANCL1 PARK2 chr6 162727662 - LANCL1 chr2 210472076 - Exonic hg38 LUSC TCGA-63-7023-01A 1 3 Out-of-frame Inter-chr Tumor suppressor gene q34 95452 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTTN-MRGPRF CTTN chr11 70409960 + MRGPRF chr11 69009957 - Exonic hg38 LUSC TCGA-63-A5M9-01A 11 63 CDS-5'UTR Intra-chr q13.3 q13.3 Seq+ 95453 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA2-CEACAM21 ITGA2 chr5 53083453 + CEACAM21 chr19 41577200 + Exonic hg38 LUSC TCGA-63-A5M9-01A 14 36 5'UTR-5'UTR Inter-chr q11.2 Seq+ 95454 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-TESMIN PPFIA1 chr11 70362488 + TESMIN chr11 68738788 - Exonic hg38 LUSC TCGA-63-A5M9-01A 6 27 In-Frame Intra-chr q13.3 q13.3 95455 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPCN2-MRPL21 TPCN2 chr11 69073001 + MRPL21 chr11 68900605 - Exonic hg38 LUSC TCGA-63-A5M9-01A 3 20 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 95456 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED12L-GOLIM4 MED12L chr3 151193666 + GOLIM4 chr3 168025095 - Exonic hg38 LUSC TCGA-63-A5M9-01A 2 12 In-Frame Intra-chr q25.1 q26.2 Seq+ 95457 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPT1A-MRPL21 CPT1A chr11 68781771 - MRPL21 chr11 68900605 - Exonic hg38 LUSC TCGA-63-A5M9-01A 2 6 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 95458 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNHG3-ADAM23 SNHG3 chr1 28510104 + ADAM23 chr2 206573121 + Exonic hg38 LUSC TCGA-63-A5MB-01A 3 11 Out-of-frame Inter-chr p35.3 q33.3 Seq+ 95459 ChimerSeq TCGA FAWG TCGA_RNA-Seq RCC1-ADAM23 RCC1 chr1 28510104 + ADAM23 chr2 206573121 + Exonic hg38 LUSC TCGA-63-A5MB-01A 3 7 Out-of-frame Inter-chr p35.3 q33.3 Seq+ 95460 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNQ3-LRRC6 KCNQ3 chr8 132480147 - LRRC6 chr8 132583779 - Exonic hg38 LUSC TCGA-63-A5MB-01A 1 5 CDS-3'UTR Intra-chr q24.22 q24.22 Seq+ 95461 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC94-ANKRD24 CCDC94 chr19 4262114 + ANKRD24 chr19 4212475 + Exonic hg38 LUSC TCGA-63-A5MB-01A 1 3 Out-of-frame Intra-chr p13.3 p13.3 95462 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMTK2-IMMP2L LMTK2 chr7 98171674 + IMMP2L chr7 110963565 - Exonic hg38 LUSC TCGA-63-A5MG-01A 4 6 In-Frame Intra-chr q21.3 q31.1 Seq+ 95463 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEX14-PRG4 PEX14 chr1 10495321 + PRG4 chr1 186312769 + Exonic hg38 LUSC TCGA-63-A5MH-01A 5 31 Out-of-frame Intra-chr p36.22 q31.1 Seq+ 95464 ChimerSeq TCGA FAWG TCGA_RNA-Seq ECHDC1-MYO6 ECHDC1 chr6 127330910 - MYO6 chr6 75890058 + Exonic hg38 LUSC TCGA-63-A5MH-01A 3 22 Out-of-frame Intra-chr q22.33 q14.1 Seq+ 95465 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDCD2L-KIAA0355 PDCD2L chr19 34404990 + KIAA0355 chr19 34352647 + Exonic hg38 LUSC TCGA-63-A5MH-01A 1 8 CDS-3'UTR Intra-chr q13.11 Seq+ 95466 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR3K-EMC10 POLR3K chr16 53476 - EMC10 chr19 50477929 + Exonic hg38 LUSC TCGA-63-A5MI-01A 2 9 In-Frame Inter-chr p13.3 q13.33 Seq+ 95467 ChimerSeq TCGA FAWG TCGA_RNA-Seq GHR-C6 GHR chr5 42424598 + C6 chr5 41203250 - Exonic hg38 LUSC TCGA-63-A5MI-01A 1 8 5'UTR-5'UTR Intra-chr p13.1 p13.1 95468 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIMM8A-TRPC5 TIMM8A chrX 101348533 - TRPC5 chrX 111782138 - Exonic hg38 LUSC TCGA-63-A5MI-01A 1000 1000 In-Frame Intra-chr q22.1 q23 95469 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-RGS20 PVT1 chr8 127794734 + RGS20 chr8 53913497 + Exonic hg38 LUSC TCGA-63-A5MJ-01A 90 535 5'UTR-5'UTR Intra-chr q24.21 q11.23 Seq+ 95470 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAT1-IRF2 FAT1 chr4 186609183 - IRF2 chr4 184429070 - Exonic hg38 LUSC TCGA-63-A5MJ-01A 35 136 CDS-5'UTR Intra-chr q35.2 Tumor suppressor gene q35.1 Transcription factor Seq+ 95471 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR1204-RGS20 MIR1204 chr8 127796008 + RGS20 chr8 53913497 + Exonic hg38 LUSC TCGA-63-A5MJ-01A 9 47 5'UTR-5'UTR Intra-chr q24.21 q11.23 95472 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIAM1-NRP2 TIAM1 chr21 31558927 - NRP2 chr2 205683091 + Exonic hg38 LUSC TCGA-63-A5MJ-01A 3 3 5'UTR-5'UTR Inter-chr q22.11 q33.3 95473 ChimerSeq TCGA FAWG TCGA_RNA-Seq FKBP10-JUP FKBP10 chr17 41820714 + JUP chr17 41754863 - Exonic hg38 LUSC TCGA-63-A5ML-01A 14 58 Out-of-frame Intra-chr q21.2 q21.2 Tumor suppressor gene Seq+ 95474 ChimerSeq TCGA FAWG TCGA_RNA-Seq EML1-ADAMDEC1 EML1 chr14 99793543 + ADAMDEC1 chr8 24384459 + Exonic hg38 LUSC TCGA-63-A5ML-01A 5 6 CDS-5'UTR Inter-chr q32.2 p21.2 Seq+ 95475 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP4S1-HEATR5A AP4S1 chr14 31080644 + HEATR5A chr14 31309182 - Exonic hg38 LUSC TCGA-63-A5ML-01A 1 3 Out-of-frame Intra-chr q12 q12 95476 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCTN3-LINGO2 DCTN3 chr9 34618676 - LINGO2 chr9 28670280 - Exonic hg38 LUSC TCGA-63-A5MM-01A 5 30 CDS-5'UTR Intra-chr p13.3 p21.1 Seq+ 95477 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTAP-EEF1A2 MTAP chr9 21802781 + EEF1A2 chr20 63496035 - Exonic hg38 LUSC TCGA-63-A5MM-01A 3 31 In-Frame Inter-chr p21.3 Tumor suppressor gene q13.33 Seq+ 95478 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOCAD-ELAVL2 FOCAD chr9 20823115 + ELAVL2 chr9 23762249 - Exonic hg38 LUSC TCGA-63-A5MM-01A 2 14 In-Frame Intra-chr p21.3 p21.3 Seq+ 95479 ChimerSeq TCGA FAWG TCGA_RNA-Seq YWHAE-MYH3 YWHAE chr17 1400047 - MYH3 chr17 10630458 - Exonic hg38 LUSC TCGA-63-A5MN-01A 8 25 5'UTR-CDS Intra-chr p13.3 p13.1 Seq+ 95480 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC38A10-SEZ6 SLC38A10 chr17 81270918 - SEZ6 chr17 28969952 - Exonic hg38 LUSC TCGA-63-A5MN-01A 1 5 In-Frame Intra-chr q25.3 q11.2 95481 ChimerSeq TCGA FAWG TCGA_RNA-Seq THSD4-WARS THSD4 chr15 71547481 + WARS chr14 100337202 - Exonic hg38 LUSC TCGA-63-A5MP-01A 40 172 In-Frame Inter-chr q23 q32.2 Seq+ 95482 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAD4-NRG1 SMAD4 chr18 51030623 + NRG1 chr8 32727949 + Exonic hg38 LUSC TCGA-63-A5MP-01A 7 18 5'UTR-5'UTR Inter-chr q21.2 Oncogene Tumor suppressor gene Transcription factor p12 Seq+ 95483 ChimerSeq TCGA FAWG TCGA_RNA-Seq LSG1-EIF2B5 LSG1 chr3 194650890 - EIF2B5 chr3 184144884 + Exonic hg38 LUSC TCGA-63-A5MP-01A 4 29 In-Frame Intra-chr q29 q27.1 Seq+ 95484 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLGAP1-LRRC23 DLGAP1 chr18 4455006 - LRRC23 chr12 6883704 + Exonic hg38 LUSC TCGA-63-A5MP-01A 3 13 5'UTR-5'UTR Inter-chr p11.31 p13.31 Seq+ 95485 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLGAP1-RPL13P5 DLGAP1 chr18 4455006 - RPL13P5 chr12 6883704 + Exonic hg38 LUSC TCGA-63-A5MP-01A 3 13 5'UTR-5'UTR Inter-chr p11.31 p13.31 Seq+ 95486 ChimerSeq TCGA FAWG TCGA_RNA-Seq THAP7-NRG1 THAP7 chr22 21000647 - NRG1 chr8 32595828 + Exonic hg38 LUSC TCGA-63-A5MP-01A 1 18 Out-of-frame Inter-chr q11.21 Transcription factor p12 Seq+ 95487 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARNTL2-STK38L ARNTL2 chr12 27333103 + STK38L chr12 27297710 + Exonic hg38 LUSC TCGA-63-A5MP-01A 1 2 CDS-5'UTR Intra-chr p11.23 Transcription factor p11.23 95488 ChimerSeq TCGA FAWG TCGA_RNA-Seq LYSMD2-SCG3 LYSMD2 chr15 51737350 - SCG3 chr15 51719408 + Exonic hg38 LUSC TCGA-63-A5MR-01A 4 10 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 95489 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSL2-OPRM1 MSL2 chr3 136194972 - OPRM1 chr6 154089826 + Exonic hg38 LUSC TCGA-63-A5MT-01A 1 8 Out-of-frame Inter-chr q22.3 q25.2 Seq+ 95490 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK1-CAMK2B ROCK1 chr18 21039472 - CAMK2B chr7 44284225 - Exonic hg38 LUSC TCGA-63-A5MT-01A 1 3 Out-of-frame Inter-chr q11.1 AGC:DMPK p13 95491 ChimerSeq TCGA FAWG TCGA_RNA-Seq FXR1-FGF10 FXR1 chr3 180912736 + FGF10 chr5 44389056 - Exonic hg38 LUSC TCGA-63-A5MV-01A 24 36 5'UTR-5'UTR Inter-chr q26.33 p12 Seq+ 95492 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP11B-TPRG1 ATP11B chr3 182848557 + TPRG1 chr3 189023750 + Exonic hg38 LUSC TCGA-63-A5MV-01A 8 20 CDS-5'UTR Intra-chr q26.33 Oncogene q28 Seq+ 95493 ChimerSeq TCGA FAWG TCGA_RNA-Seq POMK-ST6GAL1 POMK chr8 43103830 + ST6GAL1 chr3 186963785 + Exonic hg38 LUSC TCGA-63-A5MV-01A 3 10 CDS-5'UTR Inter-chr p11.21 q27.3 Seq+ 95494 ChimerSeq TCGA FAWG TCGA_RNA-Seq OAZ2-FAM96A OAZ2 chr15 64703029 - FAM96A chr15 64073028 - Exonic hg38 LUSC TCGA-63-A5MV-01A 3 3 Out-of-frame Intra-chr q22.31 q22.31 95495 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMU1-AFAP1 SMU1 chr9 33068824 - AFAP1 chr4 7872080 - Exonic hg38 LUSC TCGA-63-A5MV-01A 1 7 CDS-5'UTR Inter-chr p21.1 p16.1 Seq+ 95496 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP9X-NXF2 USP9X chrX 41086109 + NXF2 chrX 102307026 + Exonic hg38 LUSC TCGA-63-A5MV-01A 1 6 5'UTR-5'UTR Intra-chr p11.4 Oncogene q22.1 Seq+ 95497 ChimerSeq TCGA FAWG TCGA_RNA-Seq BOC-SIDT1 BOC chr3 113278783 + SIDT1 chr3 113601588 + Exonic hg38 LUSC TCGA-63-A5MW-01A 10 83 In-Frame Intra-chr q13.2 q13.2 Seq+ 95498 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPBL-STK24 NIPBL chr5 36877178 + STK24 chr13 98519473 - Exonic hg38 LUSC TCGA-63-A5MW-01A 12 38 5'UTR-CDS Inter-chr p13.2 q32.2 Seq+ 95499 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC44A1-FSD1L SLC44A1 chr9 105335699 + FSD1L chr9 105546358 + Exonic hg38 LUSC TCGA-63-A5MW-01A 7 29 Out-of-frame Intra-chr q31.1 q31.2 Seq+ 95500 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN9-TTC38 TSPAN9 chr12 3083719 + TTC38 chr22 46292791 + Exonic hg38 LUSC TCGA-63-A5MW-01A 2 36 5'UTR-CDS Inter-chr p13.33 q13.31 Seq+ 95501 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2S1-PLEKHH1 EIF2S1 chr14 67376590 + PLEKHH1 chr14 67559608 + Exonic hg38 LUSC TCGA-63-A5MW-01A 6 12 Out-of-frame Intra-chr q23.3 q24.1 Seq+ 95502 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB30-CCDC90B RAB30 chr11 83071691 - CCDC90B chr11 83265979 - Exonic hg38 LUSC TCGA-63-A5MW-01A 4 8 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 95503 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM126A-EED TMEM126A chr11 85648089 + EED chr11 86250296 + Exonic hg38 LUSC TCGA-63-A5MW-01A 2 13 5'UTR-CDS Intra-chr q14.1 q14.2 Tumor suppressor gene Seq+ 95504 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNRF3-EWSR1 ZNRF3 chr22 28884066 + EWSR1 chr22 29278030 + Exonic hg38 LUSC TCGA-63-A5MW-01A 4 1 Out-of-frame Intra-chr q12.1 q12.2 Seq+ 95505 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHC3-IFT122 PHC3 chr3 170145423 - IFT122 chr3 129463560 + Exonic hg38 LUSC TCGA-63-A5MW-01A 2 1 Out-of-frame Intra-chr q26.2 Tumor suppressor gene q21.3 95506 ChimerSeq TCGA FAWG TCGA_RNA-Seq DISC1FP1-SPON1 DISC1FP1 chr11 90546895 + SPON1 chr11 13982847 + Exonic hg38 LUSC TCGA-63-A5MW-01A 1 2 5'UTR-CDS Intra-chr q14.3 p15.2 95507 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE4D-KHDRBS3 PDE4D chr5 59180595 - KHDRBS3 chr8 135521237 + Exonic hg38 LUSC TCGA-63-A5MY-01A 31 92 In-Frame Inter-chr q12.1 q24.23 Seq+ 95508 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF180-GPX8 RNF180 chr5 64217396 + GPX8 chr5 55164055 + Exonic hg38 LUSC TCGA-63-A5MY-01A 3 10 In-Frame Intra-chr q12.3 Tumor suppressor gene q11.2 Seq+ 95509 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXN2-MYH9 TXN2 chr22 36480575 - MYH9 chr22 36349255 - Exonic hg38 LUSC TCGA-63-A5MY-01A 3 6 CDS-5'UTR Intra-chr q12.3 q12.3 Oncogene Tumor suppressor gene Seq+ 95510 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASP8-TTLL7 CASP8 chr2 201234112 + TTLL7 chr1 83870082 - Exonic hg38 LUSC TCGA-66-2727-01A 9 76 5'UTR-CDS Inter-chr q33.1 Oncogene Tumor suppressor gene p31.1 Seq+ 95511 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCTA-DSCR3 TCTA chr3 49412640 + DSCR3 chr21 37240639 - Exonic hg38 LUSC TCGA-66-2727-01A 4 6 Out-of-frame Inter-chr p21.31 q22.13 Seq+ 95512 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAP30BP-TSEN54 SAP30BP chr17 75671863 + TSEN54 chr17 75516746 + Exonic hg38 LUSC TCGA-66-2727-01A 1 13 Out-of-frame Intra-chr q25.1 q25.1 95513 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNB1L-CTSC GNB1L chr22 19802001 - CTSC chr11 88300645 - Exonic hg38 LUSC TCGA-66-2727-01A 2 5 Out-of-frame Inter-chr q11.21 q14.2 95514 ChimerSeq TCGA FAWG TCGA_RNA-Seq KPNA4-ATR KPNA4 chr3 160565214 - ATR chr3 142568154 - Exonic hg38 LUSC TCGA-66-2727-01A 1 4 Out-of-frame Intra-chr q25.33 q23 Atypical:PIKK Oncogene Tumor suppressor gene 95515 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHLDB2-RIMS2 PHLDB2 chr3 111732703 + RIMS2 chr8 104148607 + Exonic hg38 LUSC TCGA-66-2742-01A 4 18 5'UTR-CDS Inter-chr q13.2 q22.3 Seq+ 95516 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCXD2-RIMS2 PLCXD2 chr3 111732703 + RIMS2 chr8 104148607 + Exonic hg38 LUSC TCGA-66-2742-01A 4 18 3'UTR-CDS Inter-chr q13.2 q22.3 Seq+ 95517 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD27-ZFP14 ANKRD27 chr19 32643123 - ZFP14 chr19 36341590 - Exonic hg38 LUSC TCGA-66-2742-01A 1 16 Out-of-frame Intra-chr q13.11 q13.12 Transcription factor Seq+ 95518 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMYM2-DMRT2 ZMYM2 chr13 20036909 + DMRT2 chr9 1051570 + Exonic hg38 LUSC TCGA-66-2744-01A 2 12 5'UTR-5'UTR Inter-chr q12.11 p24.3 Transcription factor Seq+ 95519 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBF2-EIF4G2 SBF2 chr11 10294015 - EIF4G2 chr11 10807381 - Exonic hg38 LUSC TCGA-66-2744-01A 2 5 CDS-5'UTR Intra-chr p15.4 p15.4 Seq+ 95520 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTRR-NMD3 MTRR chr5 7897247 + NMD3 chr3 161247258 + Exonic hg38 LUSC TCGA-66-2753-01A 6 42 In-Frame Inter-chr p15.31 Oncogene q26.1 Seq+ 95521 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCALD-NSMCE2 NCALD chr8 101790862 - NSMCE2 chr8 125357219 + Exonic hg38 LUSC TCGA-66-2754-01A 27 97 5'UTR-5'UTR Intra-chr q22.3 q24.13 Seq+ 95522 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD51D-SLCO6A1 RAD51D chr17 35106386 - SLCO6A1 chr5 102413143 - Exonic hg38 LUSC TCGA-66-2754-01A 3 13 Out-of-frame Inter-chr q12 q21.1 Seq+ 95523 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD51L3-SLCO6A1 RAD51L3 chr17 35106386 - SLCO6A1 chr5 102413143 - Exonic hg38 LUSC TCGA-66-2754-01A 3 7 Out-of-frame Inter-chr q21.1 95524 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIP5K1A-SLC20A2 PIP5K1A chr1 151199081 + SLC20A2 chr8 42472654 - Exonic hg38 LUSC TCGA-66-2754-01A 1 6 CDS-5'UTR Inter-chr q21.3 p11.21 Seq+ 95525 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBP-AEBP2 MBP chr18 77066298 - AEBP2 chr12 19552853 + Exonic hg38 LUSC TCGA-66-2754-01A 1 2 CDS-3'UTR Inter-chr q23 p12.3 Transcription factor 95526 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSTF3-HSP90AA1 CSTF3 chr11 33141667 - HSP90AA1 chr14 102081821 - Exonic hg38 LUSC TCGA-66-2754-01A 1 1 5'UTR-CDS Inter-chr p13 q32.31 Oncogene 95527 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABL1-KYAT1 ABL1 chr9 130714455 + KYAT1 chr9 128845411 - Exonic hg38 LUSC TCGA-66-2755-01A 1 8 Out-of-frame Intra-chr q34.12 TK:Abl Oncogene q34.11 95528 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS20-LYN RPS20 chr8 56073178 - LYN chr8 56013588 + Exonic hg38 LUSC TCGA-66-2756-01A 221 900 Out-of-frame Intra-chr q12.1 q12.1 TK:Src 95529 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3CB-BFSP2 PIK3CB chr3 138733361 - BFSP2 chr3 133466828 + Exonic hg38 LUSC TCGA-66-2756-01A 66 172 In-Frame Intra-chr q22.3 Oncogene q22.1 Seq+ 95530 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACYP2-PPP1CB ACYP2 chr2 53973810 + PPP1CB chr2 28781738 + Exonic hg38 LUSC TCGA-66-2756-01A 23 65 Out-of-frame Intra-chr p16.2 p23.2 Seq+ 95531 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCP110-GOLPH3L CCP110 chr16 19528022 + GOLPH3L chr1 150648748 - Exonic hg38 LUSC TCGA-66-2756-01A 10 62 Out-of-frame Inter-chr p12.3 q21.3 Seq+ 95532 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC25A-SPINK8 CDC25A chr3 48164307 - SPINK8 chr3 48309946 - Exonic hg38 LUSC TCGA-66-2756-01A 6 52 In-Frame Intra-chr p21.31 p21.31 Seq+ 95533 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTN4-MITD1 RTN4 chr2 55049745 - MITD1 chr2 99174016 - Exonic hg38 LUSC TCGA-66-2756-01A 9 37 In-Frame Intra-chr p16.1 Tumor suppressor gene q11.2 Seq+ 95534 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK2-ECE2 PAK2 chr3 196740157 + ECE2 chr3 184257473 + Exonic hg38 LUSC TCGA-66-2756-01A 5 24 5'UTR-5'UTR Intra-chr q29 STE:STE20 q27.1 Seq+ 95535 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBR1-TGM5 UBR1 chr15 42983897 - TGM5 chr15 43235837 - Exonic hg38 LUSC TCGA-66-2756-01A 5 17 In-Frame Intra-chr q15.2 q15.2 Seq+ 95536 ChimerSeq TCGA FAWG TCGA_RNA-Seq DISP2-PHGR1 DISP2 chr15 40358440 + PHGR1 chr15 40356073 + Exonic hg38 LUSC TCGA-66-2756-01A 4 16 Out-of-frame Intra-chr q15.1 q15.1 Seq+ 95537 ChimerSeq TCGA FAWG TCGA_RNA-Seq THADA-EML4 THADA chr2 43344122 - EML4 chr2 42328886 + Exonic hg38 LUSC TCGA-66-2756-01A 1 23 Out-of-frame Intra-chr p21 p21 Oncogene Seq+ 95538 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDIA4-SCHIP1 PDIA4 chr7 149028321 - SCHIP1 chr3 159866163 + Exonic hg38 LUSC TCGA-66-2756-01A 5 5 Out-of-frame Inter-chr q36.1 q25.33 Seq+ 95539 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLAA-RUSC2 PLAA chr9 26946897 - RUSC2 chr9 35546430 + Exonic hg38 LUSC TCGA-66-2756-01A 2 17 CDS-5'UTR Intra-chr p21.2 p13.3 Seq+ 95540 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANGO6-CLEC2L TANGO6 chr16 69040421 + CLEC2L chr7 139536274 + Exonic hg38 LUSC TCGA-66-2756-01A 5 2 Out-of-frame Inter-chr q22.1 q34 Seq+ 95541 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESYT3-RPN1 ESYT3 chr3 138435125 + RPN1 chr3 128644983 - Exonic hg38 LUSC TCGA-66-2756-01A 2 6 In-Frame Intra-chr q22.3 q21.3 Seq+ 95542 ChimerSeq TCGA FAWG TCGA_RNA-Seq PNMA5-BCAP31 PNMA5 chrX 152991916 - BCAP31 chrX 153700975 - Exonic hg38 LUSC TCGA-66-2756-01A 2 6 5'UTR-CDS Intra-chr q28 q28 Seq+ 95543 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP2A2-PSMD13 AP2A2 chr11 977224 + PSMD13 chr11 252505 + Exonic hg38 LUSC TCGA-66-2758-01A 62 593 3'UTR-CDS Intra-chr p15.5 p15.5 Seq+ 95544 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD1-MRPL46 BTBD1 chr15 83056389 - MRPL46 chr15 88465773 - Exonic hg38 LUSC TCGA-66-2758-01A 43 253 In-Frame Intra-chr q25.2 q25.3 Seq+ 95545 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERINC2-ZCCHC17 SERINC2 chr1 31429538 + ZCCHC17 chr1 31364032 + Exonic hg38 LUSC TCGA-66-2758-01A 10 232 In-Frame Intra-chr p35.2 p35.2 Seq+ 95546 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF664-DDX55 ZNF664 chr12 123988138 + DDX55 chr12 123619432 + Exonic hg38 LUSC TCGA-66-2758-01A 10 74 5'UTR-5'UTR Intra-chr q24.31 Transcription factor q24.31 Seq+ 95547 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFLNA-DDX55 RFLNA chr12 123988138 + DDX55 chr12 123619432 + Exonic hg38 LUSC TCGA-66-2758-01A 7 46 5'UTR-5'UTR Intra-chr q24.31 q24.31 95548 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0100-SEZ6 KIAA0100 chr17 28618791 - SEZ6 chr17 28969952 - Exonic hg38 LUSC TCGA-66-2758-01A 5 38 In-Frame Intra-chr q11.2 q11.2 Seq+ 95549 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCA4-ZNF791 SMARCA4 chr19 10996544 + ZNF791 chr19 12633591 + Exonic hg38 LUSC TCGA-66-2758-01A 8 18 CDS-3'UTR Intra-chr p13.2 Oncogene Tumor suppressor gene p13.13 Transcription factor 95550 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM45A-CMSS1 TMEM45A chr3 100519608 + CMSS1 chr3 100146973 + Exonic hg38 LUSC TCGA-66-2758-01A 1 26 Out-of-frame Intra-chr q12.2 q12.1 Seq+ 95551 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPIN1-FUT9 SPIN1 chr9 88388538 + FUT9 chr6 96114039 + Exonic hg38 LUSC TCGA-66-2758-01A 6 5 5'UTR-5'UTR Inter-chr q22.1 q16.1 Seq+ 95552 ChimerSeq TCGA FAWG TCGA_RNA-Seq STX12-TMEM222 STX12 chr1 27789631 + TMEM222 chr1 27330720 + Exonic hg38 LUSC TCGA-66-2758-01A 4 7 In-Frame Intra-chr p35.3 p36.11 Seq+ 95553 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP13-CHD2 AKAP13 chr15 85533880 + CHD2 chr15 93012345 + Exonic hg38 LUSC TCGA-66-2758-01A 1 12 CDS-5'UTR Intra-chr q25.3 q26.1 Seq+ 95554 ChimerSeq TCGA FAWG TCGA_RNA-Seq LATS1-LACE1 LATS1 chr6 149717849 - LACE1 chr6 108401996 + Exonic hg38 LUSC TCGA-66-2759-01A 18 112 Out-of-frame Intra-chr q25.1 AGC:NDR Tumor suppressor gene Seq+ 95555 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGLN2-PLD3 EGLN2 chr19 40801415 + PLD3 chr19 40371673 + Exonic hg38 LUSC TCGA-66-2759-01A 15 54 In-Frame Intra-chr q13.2 q13.2 Seq+ 95556 ChimerSeq TCGA FAWG TCGA_RNA-Seq WASF2-FGR WASF2 chr1 27489986 - FGR chr1 27625151 - Exonic hg38 LUSC TCGA-66-2759-01A 3 70 5'UTR-5'UTR Intra-chr p36.11 p35.3 TK:Src Seq+ 95557 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K5-NKAIN2 MAP3K5 chr6 136720450 - NKAIN2 chr6 124791339 + Exonic hg38 LUSC TCGA-66-2759-01A 4 23 In-Frame Intra-chr q23.3 STE:STE11 q22.31 Seq+ 95558 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYMPK-ZNF573 SYMPK chr19 45827510 - ZNF573 chr19 37740194 - Exonic hg38 LUSC TCGA-66-2759-01A 3 26 Out-of-frame Intra-chr q13.32 q13.13 Transcription factor Seq+ 95559 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM242-GTF2H5 TMEM242 chr6 157318782 - GTF2H5 chr6 158170470 + Exonic hg38 LUSC TCGA-66-2759-01A 3 10 CDS-5'UTR Intra-chr q25.3 q25.3 Seq+ 95560 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFT74-WNK2 IFT74 chr9 26962087 + WNK2 chr9 93317520 + Exonic hg38 LUSC TCGA-66-2759-01A 3 6 In-Frame Intra-chr p21.2 q22.31 Tumor suppressor gene Seq+ 95561 ChimerSeq TCGA FAWG TCGA_RNA-Seq SESN1-EYS SESN1 chr6 109093795 - EYS chr6 63788249 - Exonic hg38 LUSC TCGA-66-2759-01A 2 8 In-Frame Intra-chr q21 q12 Seq+ 95562 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKR1C3-AKR1E2 AKR1C3 chr10 5102650 + AKR1E2 chr10 4835675 + Exonic hg38 LUSC TCGA-66-2759-01A 1 4 In-Frame Intra-chr p15.1 p15.1 95563 ChimerSeq TCGA FAWG TCGA_RNA-Seq NADSYN1-10 NADSYN1 chr11 71521204 + 10 chr11 71566120 + Exonic hg38 LUSC TCGA-66-2759-01A 1000 1000 Out-of-frame Intra-chr q13.4 95564 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF5-ERH DCAF5 chr14 69089948 - ERH chr14 69394912 - Exonic hg38 LUSC TCGA-66-2763-01A 3 26 3'UTR-CDS Intra-chr q24.1 q24.1 Seq+ 95565 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOSC7-ZDHHC3 EXOSC7 chr3 44976334 + ZDHHC3 chr3 44933984 - Exonic hg38 LUSC TCGA-66-2763-01A 1 1 5'UTR-5'UTR Intra-chr p21.31 Seq+ 95566 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD3-LSM1 NSD3 chr8 38295796 - LSM1 chr8 38169917 - Exonic hg38 LUSC TCGA-66-2763-01A 1000 1000 Out-of-frame Intra-chr p11.23 Tumor suppressor gene p11.23 95567 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCAR2-FGFR2 CCAR2 chr8 22604842 + FGFR2 chr10 121480021 - Exonic hg38 LUSC TCGA-66-2765-01A 12 28 5'UTR-CDS Inter-chr p21.3 Tumor suppressor gene q26.13 TK:FGFR Oncogene Seq+ 95568 ChimerSeq TCGA FAWG TCGA_RNA-Seq WASF2-FAM65B WASF2 chr1 27428761 - FAM65B chr6 24875817 - Exonic hg38 LUSC TCGA-66-2765-01A 14 17 Out-of-frame Inter-chr p36.11 Seq+ 95569 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR2-CCAR2 FGFR2 chr10 121483698 - CCAR2 chr8 22606607 + Exonic hg38 LUSC TCGA-66-2765-01A 2 49 In-Frame Inter-chr q26.13 TK:FGFR Oncogene p21.3 Tumor suppressor gene Seq+ 95570 ChimerSeq TCGA FAWG TCGA_RNA-Seq GMPS-PQLC2L GMPS chr3 155870897 + PQLC2L chr3 157553230 + Exonic hg38 LUSC TCGA-66-2766-01A 117 825 Out-of-frame Intra-chr q25.31 q25.32 Seq+ 95571 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK3-SULT1A3 STK3 chr8 98706467 - SULT1A3 chr16 30202690 + Exonic hg38 LUSC TCGA-66-2766-01A 17 29 In-Frame Inter-chr q22.2 p11.2 Seq+ 95572 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFMBT2-AKR1C4 SFMBT2 chr10 7367649 - AKR1C4 chr10 5195465 + Exonic hg38 LUSC TCGA-66-2766-01A 3 26 CDS-5'UTR Intra-chr p14 p15.1 Seq+ 95573 ChimerSeq TCGA FAWG TCGA_RNA-Seq HCK-CCM2L HCK chr20 32052486 + CCM2L chr20 32031001 + Exonic hg38 LUSC TCGA-66-2766-01A 1 18 Out-of-frame Intra-chr q11.21 TK:Src q11.21 95574 ChimerSeq TCGA FAWG TCGA_RNA-Seq STIM1-VHL STIM1 chr11 3856409 + VHL chr3 10149787 + Exonic hg38 LUSC TCGA-66-2766-01A 1 16 In-Frame Inter-chr p15.4 p25.3 Oncogene Tumor suppressor gene Seq+ 95575 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFATC3-SLC7A6 NFATC3 chr16 68183366 + SLC7A6 chr16 68294705 + Exonic hg38 LUSC TCGA-66-2766-01A 3 5 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 95576 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESCO1-LAMA3 ESCO1 chr18 21560859 - LAMA3 chr18 23773497 + Exonic hg38 LUSC TCGA-66-2766-01A 1 12 In-Frame Intra-chr q11.2 q11.2 Seq+ 95577 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDH3A1-ULK2 ALDH3A1 chr17 19739508 - ULK2 chr17 19771067 - Exonic hg38 LUSC TCGA-66-2766-01A 2 5 CDS-3'UTR Intra-chr p11.2 p11.2 Other:ULK 95578 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK3-SULT1A4 STK3 chr8 98706467 - SULT1A4 chr16 29463345 + Exonic hg38 LUSC TCGA-66-2766-01A 1000 1000 CDS-5'UTR Inter-chr q22.2 p11.2 95579 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTBP1-IGHJ6 CTBP1 chr4 1235595 - IGHJ6 chr14 105863246 - Exonic hg38 LUSC TCGA-66-2767-01A 14 0 Out-of-frame Inter-chr p16.3 Seq+ 95580 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBD1-PTRH2 TUBD1 chr17 59886083 - PTRH2 chr17 59697978 - Exonic hg38 LUSC TCGA-66-2768-01A 4 20 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 95581 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIAPH1-CYSTM1 DIAPH1 chr5 141618798 - CYSTM1 chr5 140243305 + Exonic hg38 LUSC TCGA-66-2768-01A 5 12 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 95582 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABR-GAS7 ABR chr17 1179667 - GAS7 chr17 10019897 - Exonic hg38 LUSC TCGA-66-2769-01A 11 15 5'UTR-5'UTR Intra-chr p13.3 p13.1 Seq+ 95583 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCRN1-WDR53 SCRN1 chr7 29989642 - WDR53 chr3 196554807 - Exonic hg38 LUSC TCGA-66-2769-01A 2 12 5'UTR-5'UTR Inter-chr p14.3 q29 Seq+ 95584 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUN1-ICA1 SUN1 chr7 853618 + ICA1 chr7 8236005 - Exonic hg38 LUSC TCGA-66-2770-01A 1 11 5'UTR-5'UTR Intra-chr p22.3 p21.3 Seq+ 95585 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFNA3-FLAD1 EFNA3 chr1 155079069 + FLAD1 chr1 154992713 + Exonic hg38 LUSC TCGA-66-2771-01A 8 21 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 95586 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLPTM1-CEACAM16 CLPTM1 chr19 44963761 + CEACAM16 chr19 44710496 + Exonic hg38 LUSC TCGA-66-2771-01A 3 22 5'UTR-CDS Intra-chr q13.32 q13.31 Seq+ 95587 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFNA4-FLAD1 EFNA4 chr1 155067440 + FLAD1 chr1 154992713 + Exonic hg38 LUSC TCGA-66-2771-01A 3 7 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 95588 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG13-AMBRA1 ATG13 chr11 46650317 + AMBRA1 chr11 46548500 - Exonic hg38 LUSC TCGA-66-2771-01A 3 6 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 95589 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP1B3-GRK7 ATP1B3 chr3 141876910 + GRK7 chr3 141780374 + Exonic hg38 LUSC TCGA-66-2771-01A 1 9 Out-of-frame Intra-chr q23 q23 Seq+ 95590 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCA4-C19orf38 SMARCA4 chr19 10991323 + C19orf38 chr19 10869218 + Exonic hg38 LUSC TCGA-66-2771-01A 2 4 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 95591 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT9-WNT6 CNOT9 chr2 218587695 + WNT6 chr2 218871027 + Exonic hg38 LUSC TCGA-66-2771-01A 1 5 Out-of-frame Intra-chr q35 q35 95592 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF625-SCAMP4 ZNF625 chr19 12156556 - SCAMP4 chr19 1914979 + Exonic hg38 LUSC TCGA-66-2773-01A 2 23 CDS-5'UTR Intra-chr p13.2 Transcription factor p13.3 Seq+ 95593 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDH18A1-PDLIM1 ALDH18A1 chr10 95656597 - PDLIM1 chr10 95271784 - Exonic hg38 LUSC TCGA-66-2781-01A 19 108 5'UTR-CDS Intra-chr q24.1 q23.33 Seq+ 95594 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROBO1-MED12L ROBO1 chr3 78938601 - MED12L chr3 151193490 + Exonic hg38 LUSC TCGA-66-2781-01A 2 2 Out-of-frame Intra-chr p12.3 Tumor suppressor gene q25.1 Seq+ 95595 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC42EP4-SEPT10 CDC42EP4 chr17 73311893 - SEPT10 chr2 109593119 - Exonic hg38 LUSC TCGA-66-2782-01A 10 44 Out-of-frame Inter-chr q25.1 q13 Seq+ 95596 ChimerSeq TCGA FAWG TCGA_RNA-Seq CISD1-GABRA1 CISD1 chr10 58269304 + GABRA1 chr5 161895666 + Exonic hg38 LUSC TCGA-66-2782-01A 8 26 In-Frame Inter-chr q21.1 q34 Seq+ 95597 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSI2-ICAM2 MSI2 chr17 57627303 + ICAM2 chr17 64003964 - Exonic hg38 LUSC TCGA-66-2783-01A 135 364 In-Frame Intra-chr q22 q23.3 Seq+ 95598 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNGR2-MSI2 SYNGR2 chr17 78171054 + MSI2 chr17 57401379 + Exonic hg38 LUSC TCGA-66-2783-01A 28 231 Out-of-frame Intra-chr q25.3 q22 Seq+ 95599 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK1D-SCPEP1 CSNK1D chr17 82273306 - SCPEP1 chr17 56995507 + Exonic hg38 LUSC TCGA-66-2783-01A 26 125 Out-of-frame Intra-chr q25.3 q22 Seq+ 95600 ChimerSeq TCGA FAWG TCGA_RNA-Seq VEZF1-DDX42 VEZF1 chr17 57988079 - DDX42 chr17 63787034 + Exonic hg38 LUSC TCGA-66-2783-01A 16 72 5'UTR-5'UTR Intra-chr q22 Transcription factor q23.3 Seq+ 95601 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC14L1-SPOP SEC14L1 chr17 77093347 + SPOP chr17 49622876 - Exonic hg38 LUSC TCGA-66-2783-01A 1 16 5'UTR-5'UTR Intra-chr q25.2 q21.33 Oncogene Tumor suppressor gene Seq+ 95602 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNHG20-SPOP SNHG20 chr17 77093347 + SPOP chr17 49622876 - Exonic hg38 LUSC TCGA-66-2783-01A 1 16 5'UTR-5'UTR Intra-chr q25.2 q21.33 Oncogene Tumor suppressor gene 95603 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFE2L1-LRRC46 NFE2L1 chr17 48051628 + LRRC46 chr17 47834425 + Exonic hg38 LUSC TCGA-66-2783-01A 1 11 Out-of-frame Intra-chr q21.32 Transcription factor q21.32 95604 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAPDH-ACTB GAPDH chr12 6534569 + ACTB chr7 5529663 - Exonic hg38 LUSC TCGA-66-2783-01A 1 6 5'UTR-5'UTR Inter-chr p13.31 p22.1 95605 ChimerSeq TCGA FAWG TCGA_RNA-Seq MROH1-TCTEX1D2 MROH1 chr8 144163848 + TCTEX1D2 chr3 196316231 - Exonic hg38 LUSC TCGA-66-2785-01A 18 49 Out-of-frame Inter-chr q24.3 q29 Seq+ 95606 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD4B-PPP2R3A FRMD4B chr3 69221858 - PPP2R3A chr3 136145043 + Exonic hg38 LUSC TCGA-66-2785-01A 1 7 In-Frame Intra-chr p14.1 q22.2 Seq+ 95607 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806934 + TACC3 chr4 1739702 + Exonic hg38 LUSC TCGA-66-2786-01A 2351 6102 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 95608 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD8-TOX4 CHD8 chr14 21399602 - TOX4 chr14 21487451 + Exonic hg38 LUSC TCGA-66-2786-01A 1 3 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 95609 ChimerSeq TCGA FAWG TCGA_RNA-Seq TACC3-FGFR3 TACC3 chr4 1739728 + FGFR3 chr4 1806646 + Exonic hg38 LUSC TCGA-66-2786-01A 1000 1000 Out-of-frame Intra-chr p16.3 p16.3 TK:FGFR Oncogene 95610 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGCB-SPATA18 SGCB chr4 52033431 - SPATA18 chr4 52060419 + Exonic hg38 LUSC TCGA-66-2787-01A 2 4 In-Frame Intra-chr q12 q12 Seq+ 95611 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMAN2L-FER1L5 LMAN2L chr2 96733519 - FER1L5 chr2 96704468 + Exonic hg38 LUSC TCGA-66-2787-01A 1 6 In-Frame Intra-chr q11.2 q11.2 Seq+ 95612 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFG-CD46 TFG chr3 100728858 + CD46 chr1 207767779 + Exonic hg38 LUSC TCGA-66-2787-01A 1 1 In-Frame Inter-chr q12.2 q32.2 95613 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAP1-IGHJ3 BAP1 chr3 52409937 - IGHJ3 chr14 105864630 - Exonic hg38 LUSC TCGA-66-2788-01A 37 0 Out-of-frame Inter-chr p21.1 Oncogene Tumor suppressor gene q32.33 Seq+ 95614 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG5-SYNJ2 ATG5 chr6 106316101 - SYNJ2 chr6 158081109 + Exonic hg38 LUSC TCGA-66-2788-01A 5 34 In-Frame Intra-chr q21 q25.3 Seq+ 95615 ChimerSeq TCGA FAWG TCGA_RNA-Seq TULP4-ESR1 TULP4 chr6 158314268 + ESR1 chr6 151880655 + Exonic hg38 LUSC TCGA-66-2788-01A 9 14 Out-of-frame Intra-chr q25.3 q25.1 Oncogene Tumor suppressor gene Transcription factor Seq+ 95616 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESR1-TFB1M ESR1 chr6 151944508 + TFB1M chr6 155260400 - Exonic hg38 LUSC TCGA-66-2788-01A 5 14 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.3 Seq+ 95617 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPTOR-STXBP4 RPTOR chr17 80908929 + STXBP4 chr17 55078078 + Exonic hg38 LUSC TCGA-66-2788-01A 3 7 In-Frame Intra-chr q25.3 q22 Seq+ 95618 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L2-LAMA2 EPB41L2 chr6 130926605 - LAMA2 chr6 129383122 + Exonic hg38 LUSC TCGA-66-2788-01A 1 4 In-Frame Intra-chr q23.2 q22.33 Seq+ 95619 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM9SF4-HM13 TM9SF4 chr20 32160111 + HM13 chr20 31566210 + Exonic hg38 LUSC TCGA-66-2789-01A 21 130 In-Frame Intra-chr q11.21 q11.21 Seq+ 95620 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPC1-ANKFN1 GPC1 chr2 240436084 + ANKFN1 chr17 56350766 + Exonic hg38 LUSC TCGA-66-2789-01A 5 11 Out-of-frame Inter-chr q37.3 q22 Seq+ 95621 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGB1BP1-COL5A1 ITGB1BP1 chr2 9423373 - COL5A1 chr9 134767000 + Exonic hg38 LUSC TCGA-66-2789-01A 1 10 Out-of-frame Inter-chr p25.1 q34.3 95622 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAG4-LETM2 BAG4 chr8 38192795 + LETM2 chr8 38400272 + Exonic hg38 LUSC TCGA-66-2789-01A 1 2 In-Frame Intra-chr p11.23 p11.23 95623 ChimerSeq TCGA FAWG TCGA_RNA-Seq APOO-CNKSR2 APOO chrX 23878915 - CNKSR2 chrX 21470766 + Exonic hg38 LUSC TCGA-66-2790-01A 7 29 In-Frame Intra-chr p22.11 p22.12 Seq+ 95624 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAZN-FGF12 KAZN chr1 14180592 + FGF12 chr3 192170656 - Exonic hg38 LUSC TCGA-66-2790-01A 2 37 5'UTR-CDS Inter-chr p36.21 q29 95625 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNBP1L-NAV2 FNBP1L chr1 93524323 + NAV2 chr11 19832484 + Exonic hg38 LUSC TCGA-66-2790-01A 2 5 In-Frame Inter-chr p22.1 p15.1 95626 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICALCL-HS2ST1 MICALCL chr11 12294857 + HS2ST1 chr1 87072934 + Exonic hg38 LUSC TCGA-66-2790-01A 1 3 In-Frame Inter-chr p15.3 p22.3 Seq+ 95627 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCTN1-CCDC63 TCTN1 chr12 110619956 + CCDC63 chr12 110858586 + Exonic hg38 LUSC TCGA-66-2791-01A 2 13 In-Frame Intra-chr q24.11 q24.11 Seq+ 95628 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP1B3-GRK7 ATP1B3 chr3 141876910 + GRK7 chr3 141807645 + Exonic hg38 LUSC TCGA-66-2792-01A 5 32 Out-of-frame Intra-chr q23 q23 Seq+ 95629 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED15-PI4KA MED15 chr22 20500836 + PI4KA chr22 20749994 - Exonic hg38 LUSC TCGA-66-2793-01A 87 542 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 95630 ChimerSeq TCGA FAWG TCGA_RNA-Seq PQBP1-ERAS PQBP1 chrX 48898014 + ERAS chrX 48829081 + Exonic hg38 LUSC TCGA-66-2793-01A 28 191 5'UTR-5'UTR Intra-chr p11.23 p11.23 Seq+ 95631 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H3-PYCRL ZC3H3 chr8 143536257 - PYCRL chr8 143608126 - Exonic hg38 LUSC TCGA-66-2793-01A 8 31 Out-of-frame Intra-chr Seq+ 95632 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL22-ZNF74 KLHL22 chr22 20488985 - ZNF74 chr22 20400632 + Exonic hg38 LUSC TCGA-66-2793-01A 2 29 Out-of-frame Intra-chr q11.21 q11.21 Transcription factor Seq+ 95633 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN2-FTL PTPN2 chr18 12859164 - FTL chr19 48965350 + Exonic hg38 LUSC TCGA-66-2793-01A 3 11 CDS-5'UTR Inter-chr p11.21 Tumor suppressor gene q13.33 Seq+ 95634 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPN2-MYL9 RPN2 chr20 37213865 + MYL9 chr20 36549077 + Exonic hg38 LUSC TCGA-66-2793-01A 3 6 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 95635 ChimerSeq TCGA FAWG TCGA_RNA-Seq JDP2-FLVCR2 JDP2 chr14 75432336 + FLVCR2 chr14 75622079 + Exonic hg38 LUSC TCGA-66-2793-01A 3 4 Out-of-frame Intra-chr q24.3 Tumor suppressor gene Transcription factor q24.3 Seq+ 95636 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIMS2-PVT1 RIMS2 chr8 103501062 + PVT1 chr8 127855155 + Exonic hg38 LUSC TCGA-66-2793-01A 1 6 5'UTR-5'UTR Intra-chr q22.3 q24.21 95637 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAX1BP3-NCBP3 TAX1BP3 chr17 3668488 - NCBP3 chr17 3816270 - Exonic hg38 LUSC TCGA-66-2795-01A 11 53 Out-of-frame Intra-chr p13.2 p13.2 95638 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP5-NUBPL ARHGAP5 chr14 32117287 + NUBPL chr14 31673355 + Exonic hg38 LUSC TCGA-66-2795-01A 2 17 In-Frame Intra-chr q12 q12 Seq+ 95639 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEPD-NME7 PEPD chr19 33462995 - NME7 chr1 169324500 - Exonic hg38 LUSC TCGA-66-2795-01A 2 10 Out-of-frame Inter-chr q13.11 q24.2 Seq+ 95640 ChimerSeq TCGA FAWG TCGA_RNA-Seq CANX-CCT4 CANX chr5 179709059 + CCT4 chr2 61872588 - Exonic hg38 LUSC TCGA-66-2795-01A 1 1 3'UTR-CDS Inter-chr p15 95641 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUB1-ABCB8 NUB1 chr7 151345466 + ABCB8 chr7 151045209 + Exonic hg38 LUSC TCGA-66-2800-01A 17 100 In-Frame Intra-chr q36.1 q36.1 Seq+ 95642 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1B-ENPP4 ARID1B chr6 157084905 + ENPP4 chr6 46139551 + Exonic hg38 LUSC TCGA-66-2800-01A 11 43 5'UTR-5'UTR Intra-chr q25.3 Oncogene p21.1 Seq+ 95643 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1QL1-SLC16A5 C1QL1 chr17 44967452 - SLC16A5 chr17 75098038 + Exonic hg38 LUSC TCGA-66-2800-01A 2 29 Out-of-frame Intra-chr q21.31 q25.1 Seq+ 95644 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM98-GPATCH8 TMEM98 chr17 32934324 + GPATCH8 chr17 44406051 - Exonic hg38 LUSC TCGA-66-2800-01A 2 12 In-Frame Intra-chr q11.2 q21.31 Seq+ 95645 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGF2R-SYTL3 IGF2R chr6 159969395 + SYTL3 chr6 158708322 + Exonic hg38 LUSC TCGA-66-2800-01A 2 7 In-Frame Intra-chr q25.3 Oncogene Tumor suppressor gene q25.3 Seq+ 95646 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF5A-MKS1 EIF5A chr17 7309800 + MKS1 chr17 58208583 - Exonic hg38 LUSC TCGA-66-2800-01A 2 5 Out-of-frame Intra-chr p13.1 q22 Seq+ 95647 ChimerSeq TCGA FAWG TCGA_RNA-Seq NMD3-PRKRA NMD3 chr3 161225064 + PRKRA chr2 178443384 - Exonic hg38 LUSC TCGA-66-2800-01A 1 7 Out-of-frame Inter-chr q26.1 q31.2 95648 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDR2L-KSR1 CDR2L chr17 74988122 + KSR1 chr17 27483658 + Exonic hg38 LUSC TCGA-66-2800-01A 1 5 CDS-5'UTR Intra-chr q25.1 q11.2 TKL:RAF Seq+ 95649 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC16A5-DCAF7 SLC16A5 chr17 75098181 + DCAF7 chr17 63578470 + Exonic hg38 LUSC TCGA-66-2800-01A 1 2 Out-of-frame Intra-chr q25.1 q23.3 95650 ChimerSeq TCGA FAWG TCGA_RNA-Seq OTUD7B-CTSS OTUD7B chr1 149977426 - CTSS chr1 150733145 - Exonic hg38 LUSC TCGA-68-7755-01A 99 322 Out-of-frame Intra-chr q21.2 q21.3 Seq+ 95651 ChimerSeq TCGA FAWG TCGA_RNA-Seq NBEAL1-MLLT3 NBEAL1 chr2 203202781 + MLLT3 chr9 20365744 - Exonic hg38 LUSC TCGA-68-7755-01A 6 10 In-Frame Inter-chr q33.2 p21.3 Seq+ 95652 ChimerSeq TCGA FAWG TCGA_RNA-Seq OTUD7B-HORMAD1 OTUD7B chr1 149977426 - HORMAD1 chr1 150719538 - Exonic hg38 LUSC TCGA-68-7755-01A 4 13 CDS-5'UTR Intra-chr q21.2 q21.3 Seq+ 95653 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWTR1-OT WWTR1 chr3 149572864 - OT chr3 181563720 + Exonic hg38 LUSC TCGA-68-7755-01A 1 10 Out-of-frame Intra-chr q25.1 95654 ChimerSeq TCGA FAWG TCGA_RNA-Seq URB2-1562D12.1 URB2 chr1 229627759 + 1562D12.1 chr8 101461617 - Exonic hg38 LUSC TCGA-68-8250-01A 39 215 Out-of-frame Inter-chr q42.13 95655 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIFR-BCAS3 LIFR chr5 38496382 - BCAS3 chr17 61368327 + Exonic hg38 LUSC TCGA-68-8250-01A 17 111 In-Frame Inter-chr p13.1 Oncogene Tumor suppressor gene q23.2 Seq+ 95656 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP3-RELN AGAP3 chr7 151087072 + RELN chr7 103551296 - Exonic hg38 LUSC TCGA-68-8250-01A 5 19 Out-of-frame Intra-chr q36.1 q22.1 Seq+ 95657 ChimerSeq TCGA FAWG TCGA_RNA-Seq GIGYF2-ATG16L1 GIGYF2 chr2 232697392 + ATG16L1 chr2 233256102 + Exonic hg38 LUSC TCGA-68-8250-01A 3 15 5'UTR-3'UTR Intra-chr q37.1 Seq+ 95658 ChimerSeq TCGA FAWG TCGA_RNA-Seq RELN-CHRM2 RELN chr7 103551067 - CHRM2 chr7 136951003 + Exonic hg38 LUSC TCGA-68-8250-01A 3 11 CDS-5'UTR Intra-chr q22.1 q33 Seq+ 95659 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF7L1-TMEM182 TCF7L1 chr2 85283578 + TMEM182 chr2 102932885 + Exonic hg38 LUSC TCGA-68-8250-01A 2 7 CDS-3'UTR Intra-chr p11.2 Oncogene Transcription factor q12.1 95660 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB20-CFAP44 ZBTB20 chr3 115071219 - CFAP44 chr3 113304117 - Exonic hg38 LUSC TCGA-68-8250-01A 2 5 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.2 95661 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAG1-STK3 SPAG1 chr8 100233537 + STK3 chr8 98707311 - Exonic hg38 LUSC TCGA-68-8250-01A 1 4 In-Frame Intra-chr q22.2 q22.2 Seq+ 95662 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSTF3-CCDC73 CSTF3 chr11 33161299 - CCDC73 chr11 32683574 - Exonic hg38 LUSC TCGA-68-8251-01A 3 37 In-Frame Intra-chr p13 p13 Seq+ 95663 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNND1-LARGE2 CTNND1 chr11 57804780 + LARGE2 chr11 45922821 + Exonic hg38 LUSC TCGA-68-8251-01A 5 9 CDS-5'UTR Intra-chr q12.1 Tumor suppressor gene p11.2 95664 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOT1-RHBDL3 RHOT1 chr17 32201056 + RHBDL3 chr17 32316232 + Exonic hg38 LUSC TCGA-68-8251-01A 1 17 In-Frame Intra-chr q11.2 q11.2 95665 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL10-CNN3 OSBPL10 chr3 31830040 - CNN3 chr1 94903524 - Exonic hg38 LUSC TCGA-68-8251-01A 2 4 In-Frame Inter-chr p22.3 p21.3 95666 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL22-RER1 RPL22 chr1 6197652 - RER1 chr1 2395784 + Exonic hg38 LUSC TCGA-68-8251-01A 1 7 CDS-5'UTR Intra-chr p36.31 p36.32 95667 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMG2-PTPN2 PSMG2 chr18 12724619 + PTPN2 chr18 12825944 - Exonic hg38 LUSC TCGA-68-8251-01A 1 4 In-Frame Intra-chr p11.21 p11.21 Tumor suppressor gene Seq+ 95668 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-RHOT1 NF1 chr17 31095369 + RHOT1 chr17 32171043 + Exonic hg38 LUSC TCGA-68-8251-01A 1 2 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 95669 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNRF3-ZC3H7B ZNRF3 chr22 28987201 + ZC3H7B chr22 41320655 + Exonic hg38 LUSC TCGA-68-A59I-01A 66 297 CDS-5'UTR Intra-chr q12.1 q13.2 Seq+ 95670 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATS-TSC22D4 GATS chr7 100271838 - TSC22D4 chr7 100467600 - Exonic hg38 LUSC TCGA-68-A59I-01A 7 27 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 95671 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCB1-BCRP4 SMARCB1 chr22 23816936 + BCRP4 chr22 22630065 + Exonic hg38 LUSC TCGA-68-A59I-01A 3 6 Out-of-frame Intra-chr q11.23 Oncogene Tumor suppressor gene q11.22 95672 ChimerSeq TCGA FAWG TCGA_RNA-Seq JAZF1-SFRP4 JAZF1 chr7 27991909 - SFRP4 chr7 37926774 - Exonic hg38 LUSC TCGA-68-A59I-01A 2 8 CDS-5'UTR Intra-chr p15.1 Transcription factor p14.1 Tumor suppressor gene Seq+ 95673 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC9-C8orf34 HDAC9 chr7 18648683 + C8orf34 chr8 68640376 + Exonic hg38 LUSC TCGA-68-A59I-01A 1 10 Out-of-frame Inter-chr p21.1 q13.2 Seq+ 95674 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC28-TUG1 TTC28 chr22 28296198 - TUG1 chr22 30972855 + Exonic hg38 LUSC TCGA-68-A59I-01A 1 8 CDS-5'UTR Intra-chr q12.1 q12.2 95675 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS29-MGME1 VPS29 chr12 110502049 - MGME1 chr20 17988166 + Exonic hg38 LUSC TCGA-68-A59I-01A 2 1 Out-of-frame Inter-chr q24.11 p11.23 95676 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTSL1-1 ADAMTSL1 chr9 18504956 + 1 chr7 64993414 - Exonic hg38 LUSC TCGA-68-A59I-01A 1 4 CDS-3'UTR Inter-chr p22.2 95677 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKR1C3-AKR1E2 AKR1C3 chr10 5097550 + AKR1E2 chr10 4830675 + Exonic hg38 LUSC TCGA-68-A59J-01A 13 90 In-Frame Intra-chr p15.1 p15.1 95678 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO1-SLC7A8 ANO1 chr11 70171039 + SLC7A8 chr14 23166540 - Exonic hg38 LUSC TCGA-68-A59J-01A 11 52 In-Frame Inter-chr q13.3 q11.2 Seq+ 95679 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF217-HDDC2 RNF217 chr6 125058106 + HDDC2 chr6 125277240 - Exonic hg38 LUSC TCGA-68-A59J-01A 1 1 In-Frame Intra-chr q22.31 q22.31 95680 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCA5-C17orf67 ABCA5 chr17 69283953 - C17orf67 chr17 56795180 - Exonic hg38 LUSC TCGA-6A-AB49-01A 8 60 Out-of-frame Intra-chr q24.3 q22 Seq+ 95681 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA3-GGT7 NCOA3 chr20 47502019 + GGT7 chr20 34863548 - Exonic hg38 LUSC TCGA-6A-AB49-01A 1 13 5'UTR-CDS Intra-chr q13.12 Transcription factor q11.22 Seq+ 95682 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOP1-SLC2A10 TOP1 chr20 41118296 + SLC2A10 chr20 46729353 + Exonic hg38 LUSC TCGA-6A-AB49-01A 1 10 Out-of-frame Intra-chr q12 Oncogene q13.12 Seq+ 95683 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM177A1-AP4S1 FAM177A1 chr14 35046628 + AP4S1 chr14 31080573 + Exonic hg38 LUSC TCGA-70-6722-01A 4 30 In-Frame Intra-chr q13.2 q12 Seq+ 95684 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRG-MCM3AP PTPRG chr3 61748982 + MCM3AP chr21 46280137 - Exonic hg38 LUSC TCGA-70-6722-01A 1 15 In-Frame Inter-chr p14.2 q22.3 Seq+ 95685 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAALADL2-NCKAP5 NAALADL2 chr3 175471758 + NCKAP5 chr2 132868974 - Exonic hg38 LUSC TCGA-70-6722-01A 1 11 In-Frame Inter-chr q26.31 q21.2 Seq+ 95686 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARD3B-VWC2L PARD3B chr2 204965323 + VWC2L chr2 214575672 + Exonic hg38 LUSC TCGA-70-6722-01A 1 6 In-Frame Intra-chr q33.3 q34 Seq+ 95687 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF121-PCDH9 RNF121 chr11 71960891 + PCDH9 chr13 66305028 - Exonic hg38 LUSC TCGA-70-6723-01A 10 44 Out-of-frame Inter-chr q13.4 q21.32 Tumor suppressor gene Seq+ 95688 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTG1-CCNC ACTG1 chr17 81510686 - CCNC chr6 99568651 - Exonic hg38 LUSC TCGA-70-6723-01A 5 25 Out-of-frame Inter-chr q25.3 q16.2 Tumor suppressor gene Seq+ 95689 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF98-CPAMD8 ZNF98 chr19 22532339 - CPAMD8 chr19 16925372 - Exonic hg38 LUSC TCGA-70-6723-01A 2 14 5'UTR-CDS Intra-chr p12 Transcription factor p13.11 Seq+ 95690 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCEA1-EGFR TCEA1 chr8 54022063 - EGFR chr7 55142286 + Exonic hg38 LUSC TCGA-70-6723-01A 1 2 Out-of-frame Inter-chr q11.23 p11.2 TK:EGFR Oncogene Seq+ 95691 ChimerSeq TCGA FAWG TCGA_RNA-Seq VDAC3-DKK4 VDAC3 chr8 42395133 + DKK4 chr8 42377172 - Exonic hg38 LUSC TCGA-77-6842-01A 12 484 CDS-5'UTR Intra-chr p11.21 p11.21 Seq+ 95692 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELMO1-SCIN ELMO1 chr7 37096619 - SCIN chr7 12644584 + Exonic hg38 LUSC TCGA-77-6842-01A 27 165 In-Frame Intra-chr p14.1 p21.3 Seq+ 95693 ChimerSeq TCGA FAWG TCGA_RNA-Seq PI4KA-PRODH PI4KA chr22 20858570 - PRODH chr22 18925722 - Exonic hg38 LUSC TCGA-77-6842-01A 1 9 CDS-5'UTR Intra-chr q11.21 q11.21 Tumor suppressor gene Seq+ 95694 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT6A-SLC20A2 KAT6A chr8 42048378 - SLC20A2 chr8 42535335 - Exonic hg38 LUSC TCGA-77-6842-01A 1 6 CDS-5'UTR Intra-chr p11.21 Oncogene p11.21 95695 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARCH8-MSMB 2019_ 3_ 8_ chr10 45489367 - MSMB chr10 46040091 - Exonic hg38 LUSC TCGA-77-6843-01A 1 5 Out-of-frame Intra-chr q11.22 Tumor suppressor gene Seq+ 95696 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRIPT-GAS5 CRIPT chr2 46619681 + GAS5 chr1 173866567 - Exonic hg38 LUSC TCGA-77-6845-01A 3 16 CDS-3'UTR Inter-chr p21 q25.1 Tumor suppressor gene Seq+ 95697 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEF2K-C10orf35 EEF2K chr16 22206679 + C10orf35 chr10 69631480 + Exonic hg38 LUSC TCGA-77-6845-01A 4 11 Out-of-frame Inter-chr p12.2 q22.1 Seq+ 95698 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRD9-CBFB BRD9 chr5 883938 - CBFB chr16 67029727 + Exonic hg38 LUSC TCGA-77-7138-01A 2 5 In-Frame Inter-chr p15.33 q22.1 Seq+ 95699 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBAP2-SLC26A7 UBAP2 chr9 33960826 - SLC26A7 chr8 91289136 + Exonic hg38 LUSC TCGA-77-7138-01A 1 5 Out-of-frame Inter-chr p13.3 q21.3 Seq+ 95700 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1A-RPL4 ARID1A chr1 26732792 + RPL4 chr15 66500347 - Exonic hg38 LUSC TCGA-77-7139-01A 45 318 Out-of-frame Inter-chr p36.11 Oncogene Tumor suppressor gene q22.31 Seq+ 95701 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK3-TDRD9 MARK3 chr14 103492034 + TDRD9 chr14 104040196 + Exonic hg38 LUSC TCGA-77-7139-01A 31 59 In-Frame Intra-chr q32.32 CAMK:CAMKL q32.33 Seq+ 95702 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYB561-AMZ2P1 CYB561 chr17 63446245 - AMZ2P1 chr17 64968381 - Exonic hg38 LUSC TCGA-77-7140-01A 23 181 5'UTR-3'UTR Intra-chr q23.3 q24.1 Seq+ 95703 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADNP-PCIF1 ADNP chr20 50928651 - PCIF1 chr20 45941053 + Exonic hg38 LUSC TCGA-77-7140-01A 13 40 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.12 Seq+ 95704 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF519-C16orf97 ZNF519 chr18 14132275 - C16orf97 chr16 52005634 - Exonic hg38 LUSC TCGA-77-7140-01A 10 46 3'UTR-3'UTR Inter-chr p11.21 Transcription factor q12.1 Seq+ 95705 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMG20A-RCN2 HMG20A chr15 77421004 + RCN2 chr15 76932361 + Exonic hg38 LUSC TCGA-77-7140-01A 9 43 5'UTR-CDS Intra-chr q24.3 Transcription factor q24.3 Seq+ 95706 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARD3-NSUN6 PARD3 chr10 34269657 - NSUN6 chr10 18616293 - Exonic hg38 LUSC TCGA-77-7140-01A 13 27 In-Frame Intra-chr p11.21 p12.31 Seq+ 95707 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB2A-PLEKHA6 RAB2A chr8 60584815 + PLEKHA6 chr1 204274809 - Exonic hg38 LUSC TCGA-77-7140-01A 4 33 CDS-5'UTR Inter-chr q12.1 q32.1 Seq+ 95708 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM131-BAGE2 TMEM131 chr2 97888052 - BAGE2 chr21 10454134 + Exonic hg38 LUSC TCGA-77-7140-01A 2 8 In-Frame Inter-chr q11.2 p11.2 Seq+ 95709 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNBP1L-EFCAB8 FNBP1L chr1 93499583 + EFCAB8 chr20 32943636 + Exonic hg38 LUSC TCGA-77-7140-01A 2 5 Out-of-frame Inter-chr p22.1 q11.21 95710 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD12-EPB41L3 ANKRD12 chr18 9182519 + EPB41L3 chr18 5489161 - Exonic hg38 LUSC TCGA-77-7141-01A 4 7 CDS-5'UTR Intra-chr p11.22 p11.31 Tumor suppressor gene Seq+ 95711 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERINC5-THBS4 SERINC5 chr5 80174954 - THBS4 chr5 80076855 + Exonic hg38 LUSC TCGA-77-7142-01A 42 163 In-Frame Intra-chr q14.1 q14.1 Seq+ 95712 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDIA5-DIRC2 PDIA5 chr3 123124343 + DIRC2 chr3 122879263 + Exonic hg38 LUSC TCGA-77-7142-01A 41 115 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 95713 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-RNF135 NF1 chr17 31095369 + RNF135 chr17 30997242 + Exonic hg38 LUSC TCGA-77-7142-01A 24 26 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 95714 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE4D-RAB3C PDE4D chr5 59768247 - RAB3C chr5 58825038 + Exonic hg38 LUSC TCGA-77-7142-01A 6 40 In-Frame Intra-chr q12.1 q11.2 Seq+ 95715 ChimerSeq TCGA FAWG TCGA_RNA-Seq HN1-NUP85 HN1 chr17 75154342 - NUP85 chr17 75208527 + Exonic hg38 LUSC TCGA-77-7142-01A 5 19 Out-of-frame Intra-chr q25.1 Seq+ 95716 ChimerSeq TCGA FAWG TCGA_RNA-Seq RCOR1-LSAMP RCOR1 chr14 102708583 + LSAMP chr3 115852617 - Exonic hg38 LUSC TCGA-77-7142-01A 4 5 Out-of-frame Inter-chr q32.31 q13.31 Tumor suppressor gene Seq+ 95717 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHNAK-EEF1G AHNAK chr11 62533661 - EEF1G chr11 62567528 - Exonic hg38 LUSC TCGA-77-7142-01A 3 7 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q12.3 Seq+ 95718 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUDT3-DNAH8 NUDT3 chr6 34392264 - DNAH8 chr6 38828184 + Exonic hg38 LUSC TCGA-77-7142-01A 1 12 In-Frame Intra-chr p21.31 p21.2 Seq+ 95719 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKAL1-OR2H1 CDKAL1 chr6 20781265 + OR2H1 chr6 29458454 + Exonic hg38 LUSC TCGA-77-7142-01A 2 6 CDS-3'UTR Intra-chr p22.3 Seq+ 95720 ChimerSeq TCGA FAWG TCGA_RNA-Seq GART-TMEM50B GART chr21 33542065 - TMEM50B chr21 33439297 - Exonic hg38 LUSC TCGA-77-7337-01A 7 3 5'UTR-5'UTR Intra-chr Seq+ 95721 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPRR1A-SPRR2E SPRR1A chr1 152985451 + SPRR2E chr1 153093666 - Exonic hg38 LUSC TCGA-77-7337-01A 1000 1000 Out-of-frame Intra-chr q21.3 q21.3 95722 ChimerSeq TCGA FAWG TCGA_RNA-Seq ICAM1-HNRNPM ICAM1 chr19 10275028 + HNRNPM chr19 8485603 + Exonic hg38 LUSC TCGA-77-7338-01A 43 94 In-Frame Intra-chr p13.2 p13.2 Seq+ 95723 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF3K-PPP2R2A EIF3K chr19 38626102 + PPP2R2A chr8 26370134 + Exonic hg38 LUSC TCGA-77-7338-01A 20 44 3'UTR-CDS Inter-chr p21.2 Seq+ 95724 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERPINB13-SERPINB5 SERPINB13 chr18 63595184 + SERPINB5 chr18 63503330 + Exonic hg38 LUSC TCGA-77-7338-01A 2 16 In-Frame Intra-chr q21.33 q21.33 Tumor suppressor gene 95725 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICALL1-EIF3L MICALL1 chr22 37927826 + EIF3L chr22 37870176 + Exonic hg38 LUSC TCGA-77-7338-01A 2 4 In-Frame Intra-chr q13.1 q13.1 Seq+ 95726 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE7A-ARMC1 PDE7A chr8 65779720 - ARMC1 chr8 65627433 - Exonic hg38 LUSC TCGA-77-7338-01A 2 2 CDS-5'UTR Intra-chr q13.1 q13.1 95727 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLCO2A1-SLC25A36 SLCO2A1 chr3 133973663 - SLC25A36 chr3 140970927 + Exonic hg38 LUSC TCGA-77-7338-01A 2 1 In-Frame Intra-chr q22.2 q23 95728 ChimerSeq TCGA FAWG TCGA_RNA-Seq EMP2-TERF2 EMP2 chr16 10543570 - TERF2 chr16 69385486 - Exonic hg38 LUSC TCGA-77-7463-01A 22 28 In-Frame Intra-chr p13.13 Tumor suppressor gene q22.1 Transcription factor Seq+ 95729 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLI3-CROT GLI3 chr7 42076752 - CROT chr7 87346340 + Exonic hg38 LUSC TCGA-77-7465-01A 7 28 CDS-5'UTR Intra-chr p14.1 Transcription factor q21.12 Seq+ 95730 ChimerSeq TCGA FAWG TCGA_RNA-Seq NINL-GINS1 NINL chr20 25526408 - GINS1 chr20 25417104 + Exonic hg38 LUSC TCGA-77-7465-01A 5 30 Out-of-frame Intra-chr p11.21 p11.21 Seq+ 95731 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC11A2-ATP8B1 SLC11A2 chr12 51026315 - ATP8B1 chr18 57697867 - Exonic hg38 LUSC TCGA-77-8007-01A 1 3 5'UTR-CDS Inter-chr q13.12 q21.31 95732 ChimerSeq TCGA FAWG TCGA_RNA-Seq AXIN1-TMEM207 AXIN1 chr16 304304 - TMEM207 chr3 190447827 - Exonic hg38 LUSC TCGA-77-8008-01A 1 3 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene q28 Seq+ 95733 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPCN2-TMEM179B TPCN2 chr11 69049106 + TMEM179B chr11 62789023 + Exonic hg38 LUSC TCGA-77-8009-01A 21 47 Out-of-frame Intra-chr q13.3 q12.3 Seq+ 95734 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRM2B-ZNF704 RRM2B chr8 102218814 - ZNF704 chr8 80643129 - Exonic hg38 LUSC TCGA-77-8009-01A 16 38 In-Frame Intra-chr q22.3 q21.13 Transcription factor Seq+ 95735 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPD52-RALYL TPD52 chr8 80171425 - RALYL chr8 84873284 + Exonic hg38 LUSC TCGA-77-8009-01A 14 20 In-Frame Intra-chr q21.13 q21.2 Seq+ 95736 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB40C-MYH11 RAB40C chr16 618260 + MYH11 chr16 15823411 - Exonic hg38 LUSC TCGA-77-8009-01A 5 5 CDS-5'UTR Intra-chr p13.3 Oncogene Seq+ 95737 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF130-DNAJC19 RNF130 chr5 180040453 - DNAJC19 chr3 180988229 - Exonic hg38 LUSC TCGA-77-8009-01A 4 4 Out-of-frame Inter-chr q35.3 q26.33 Seq+ 95738 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF10-PAX5 DCAF10 chr9 37801405 + PAX5 chr9 37020801 - Exonic hg38 LUSC TCGA-77-8009-01A 3 3 Out-of-frame Intra-chr p13.2 p13.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 95739 ChimerSeq TCGA FAWG TCGA_RNA-Seq C10orf76-MGEA5 C10orf76 chr10 101956597 - MGEA5 chr10 101804019 - Exonic hg38 LUSC TCGA-77-8009-01A 1 4 Out-of-frame Intra-chr q24.32 q24.32 Seq+ 95740 ChimerSeq TCGA FAWG TCGA_RNA-Seq REL-RAB1A REL chr2 60901083 + RAB1A chr2 65104806 - Exonic hg38 LUSC TCGA-77-8009-01A 1 4 Out-of-frame Intra-chr p16.1 Oncogene Transcription factor p14 95741 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH1-CHST9 NOTCH1 chr9 136506527 - CHST9 chr18 26944366 - Exonic hg38 LUSC TCGA-77-8130-01A 2 2 Out-of-frame Inter-chr q34.3 Oncogene Tumor suppressor gene q11.2 95742 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPO6-HIRIP3 XPO6 chr16 28211366 - HIRIP3 chr16 29995810 - Exonic hg38 LUSC TCGA-77-8130-01A 1000 1000 5'UTR-5'UTR Intra-chr p12.1 p11.2 95743 ChimerSeq TCGA FAWG TCGA_RNA-Seq MNAT1-SPSB1 MNAT1 chr14 60879835 + SPSB1 chr1 9367448 + Exonic hg38 LUSC TCGA-77-8131-01A 2 15 Out-of-frame Inter-chr q23.1 p36.22 Seq+ 95744 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABL2-GPR161 ABL2 chr1 179229241 - GPR161 chr1 168114549 - Exonic hg38 LUSC TCGA-77-8131-01A 1 5 CDS-5'UTR Intra-chr q25.2 TK:Abl Oncogene q24.2 95745 ChimerSeq TCGA FAWG TCGA_RNA-Seq GMDS-CASC15 GMDS chr6 1930103 - CASC15 chr6 22173998 + Exonic hg38 LUSC TCGA-77-8136-01A 5 40 CDS-5'UTR Intra-chr p25.3 p22.3 Seq+ 95746 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM10-SEC16B RBM10 chrX 47145516 + SEC16B chr1 177968039 - Exonic hg38 LUSC TCGA-77-8136-01A 1 23 CDS-5'UTR Inter-chr p11.3 q25.2 95747 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX39B-NCR3 DDX39B chr6 31535367 - NCR3 chr6 31589899 - Exonic hg38 LUSC TCGA-77-8136-01A 3 3 5'UTR-5'UTR Intra-chr Seq+ 95748 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF13A-CCHCR1 KIF13A chr6 17849377 - CCHCR1 chr6 31145808 - Exonic hg38 LUSC TCGA-77-8138-01A 8 59 CDS-5'UTR Intra-chr p22.3 Seq+ 95749 ChimerSeq TCGA FAWG TCGA_RNA-Seq UAP1-NOS1AP UAP1 chr1 162566348 + NOS1AP chr1 162287344 + Exonic hg38 LUSC TCGA-77-8139-01A 1 11 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 95750 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP3-HERC1 USP3 chr15 63504830 + HERC1 chr15 63663204 - Exonic hg38 LUSC TCGA-77-8139-01A 1 11 In-Frame Intra-chr q22.31 q22.31 Seq+ 95751 ChimerSeq TCGA FAWG TCGA_RNA-Seq VRK3-PTOV1 VRK3 chr19 49998677 - PTOV1 chr19 49857743 + Exonic hg38 LUSC TCGA-77-8140-01A 35 102 Out-of-frame Intra-chr q13.33 CK1:VRK q13.33 Seq+ 95752 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGRN1-C16orf96 MGRN1 chr16 4625048 + C16orf96 chr16 4571561 + Exonic hg38 LUSC TCGA-77-8140-01A 4 22 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 95753 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM259-SBNO2 TMEM259 chr19 1020772 - SBNO2 chr19 1127765 - Exonic hg38 LUSC TCGA-77-8140-01A 3 14 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 95754 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYT1-TCEA2 MYT1 chr20 64151910 + TCEA2 chr20 64062430 + Exonic hg38 LUSC TCGA-77-8140-01A 2 11 3'UTR-5'UTR Intra-chr Other:WEE Transcription factor q13.33 Seq+ 95755 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS11-AURKAIP1 INTS11 chr1 1324581 - AURKAIP1 chr1 1374445 - Exonic hg38 LUSC TCGA-77-8140-01A 1 10 In-Frame Intra-chr p36.33 p36.33 95756 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD3-TACC1 NSD3 chr8 38318895 - TACC1 chr8 38847955 + Exonic hg38 LUSC TCGA-77-8143-01A 3 17 Out-of-frame Intra-chr p11.23 Tumor suppressor gene p11.22 95757 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETNK1-CMAS ETNK1 chr12 22659154 + CMAS chr12 22055149 + Exonic hg38 LUSC TCGA-77-8143-01A 3 13 In-Frame Intra-chr p12.1 p12.1 Seq+ 95758 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A13-MAGI2 SLC25A13 chr7 96184927 - MAGI2 chr7 78369213 - Exonic hg38 LUSC TCGA-77-8144-01A 7 9 In-Frame Intra-chr q21.3 q21.11 Seq+ 95759 ChimerSeq TCGA FAWG TCGA_RNA-Seq C9orf3-WDR53 C9orf3 chr9 95005616 + WDR53 chr3 196554807 - Exonic hg38 LUSC TCGA-77-8145-01A 14 110 Out-of-frame Inter-chr q22.32 q29 Seq+ 95760 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM104A-CDC42EP4 FAM104A chr17 73232086 - CDC42EP4 chr17 73286612 - Exonic hg38 LUSC TCGA-77-8146-01A 6 30 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 95761 ChimerSeq TCGA FAWG TCGA_RNA-Seq STIP1-PC STIP1 chr11 64200293 + PC chr11 66954436 - Exonic hg38 LUSC TCGA-77-8148-01A 1 19 CDS-5'UTR Intra-chr q13.1 q13.2 Seq+ 95762 ChimerSeq TCGA FAWG TCGA_RNA-Seq RLF-CAP1 RLF chr1 40202614 + CAP1 chr1 40064227 + Exonic hg38 LUSC TCGA-77-8148-01A 1 4 In-Frame Intra-chr p34.2 Transcription factor p34.2 95763 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF10-OASL RNF10 chr12 120552698 + OASL chr12 121020786 - Exonic hg38 LUSC TCGA-77-8148-01A 1000 1000 Out-of-frame Intra-chr q24.31 q24.31 95764 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB14-C5 RAB14 chr9 121201639 - C5 chr9 120991280 - Exonic hg38 LUSC TCGA-77-8150-01A 6 33 5'UTR-CDS Intra-chr q33.2 q33.2 Seq+ 95765 ChimerSeq TCGA FAWG TCGA_RNA-Seq INCENP-CCS INCENP chr11 62141044 + CCS chr11 66605339 + Exonic hg38 LUSC TCGA-77-8153-01A 12 64 In-Frame Intra-chr q12.3 q13.2 Seq+ 95766 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPBL-MAPRE1 NIPBL chr5 36877178 + MAPRE1 chr20 32825925 + Exonic hg38 LUSC TCGA-77-8153-01A 10 50 5'UTR-5'UTR Inter-chr p13.2 q11.21 Seq+ 95767 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFS6-C7 NDUFS6 chr5 1802374 + C7 chr5 40928580 + Exonic hg38 LUSC TCGA-77-8153-01A 3 12 In-Frame Intra-chr p15.33 p13.1 Tumor suppressor gene Seq+ 95768 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF14-DDX59 KIF14 chr1 200615355 - DDX59 chr1 200644517 - Exonic hg38 LUSC TCGA-77-8153-01A 1 16 Out-of-frame Intra-chr q32.1 q32.1 95769 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF768-LAT ZNF768 chr16 30525005 - LAT chr16 28989527 + Exonic hg38 LUSC TCGA-77-8154-01A 7 32 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 95770 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNB1-NADK GNB1 chr1 1890820 - NADK chr1 1765446 - Exonic hg38 LUSC TCGA-77-8154-01A 8 5 5'UTR-5'UTR Intra-chr p36.33 p36.33 Seq+ 95771 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC7B-RUNX1 TTC7B chr14 90644048 - RUNX1 chr21 34892963 - Exonic hg38 LUSC TCGA-77-8154-01A 3 3 Out-of-frame Inter-chr q32.11 q22.12 Oncogene Tumor suppressor gene Transcription factor Seq+ 95772 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCTD20-PNPLA1 KCTD20 chr6 36470257 + PNPLA1 chr6 36291320 + Exonic hg38 LUSC TCGA-77-8156-01A 4 26 In-Frame Intra-chr p21.31 p21.31 Seq+ 95773 ChimerSeq TCGA FAWG TCGA_RNA-Seq PANK3-IGHJ4 PANK3 chr5 168552535 - IGHJ4 chr14 105864251 - Exonic hg38 LUSC TCGA-77-A5FZ-01A 33 0 Out-of-frame Inter-chr q34 95774 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC2A3P1-IGHJ4 SLC2A3P1 chr5 168552535 - IGHJ4 chr14 105864251 - Exonic hg38 LUSC TCGA-77-A5FZ-01A 33 0 Out-of-frame Inter-chr q34 95775 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLF12-COMMD6 KLF12 chr13 73845827 - COMMD6 chr13 75537675 - Exonic hg38 LUSC TCGA-77-A5G3-01A 1 9 Out-of-frame Intra-chr q22.1 Transcription factor q22.2 95776 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP25-CAPN3 USP25 chr21 15831629 + CAPN3 chr15 42384483 + Exonic hg38 LUSC TCGA-77-A5G3-01A 2 4 Out-of-frame Inter-chr q21.1 q15.1 Seq+ 95777 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHH-PLCB1 SHH chr7 155811823 - PLCB1 chr20 8716264 + Exonic hg38 LUSC TCGA-77-A5G3-01A 1 4 Out-of-frame Inter-chr q36.3 p12.3 Seq+ 95778 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG5-NTM ATG5 chr6 106248150 - NTM chr11 131660929 + Exonic hg38 LUSC TCGA-77-A5G6-01A 4 61 CDS-5'UTR Inter-chr q21 q25 Seq+ 95779 ChimerSeq TCGA FAWG TCGA_RNA-Seq EML1-TTLL5 EML1 chr14 99793543 + TTLL5 chr14 75882685 + Exonic hg38 LUSC TCGA-77-A5G6-01A 12 13 Out-of-frame Intra-chr q32.2 q24.3 Seq+ 95780 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD51B-MARK3 RAD51B chr14 67887204 + MARK3 chr14 103480387 + Exonic hg38 LUSC TCGA-77-A5G6-01A 8 15 In-Frame Intra-chr q24.1 q32.32 CAMK:CAMKL Seq+ 95781 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARAP2-PDS5A ARAP2 chr4 36091881 - PDS5A chr4 39869462 - Exonic hg38 LUSC TCGA-77-A5G6-01A 3 13 In-Frame Intra-chr p14 p14 Seq+ 95782 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTLL5-RGS6 TTLL5 chr14 75783530 + RGS6 chr14 72454528 + Exonic hg38 LUSC TCGA-77-A5G6-01A 3 11 In-Frame Intra-chr q24.3 q24.2 Seq+ 95783 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB18-ZBTB20 RAB18 chr10 27526889 + ZBTB20 chr3 114693575 - Exonic hg38 LUSC TCGA-77-A5G6-01A 1 8 CDS-5'UTR Inter-chr p12.1 q13.31 Transcription factor 95784 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTN4IP1-QRSL1 RTN4IP1 chr6 106628748 - QRSL1 chr6 106640349 + Exonic hg38 LUSC TCGA-77-A5G6-01A 1 6 Out-of-frame Intra-chr q21 Tumor suppressor gene q21 95785 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK1G1-PPIB CSNK1G1 chr15 64300319 - PPIB chr15 64156909 - Exonic hg38 LUSC TCGA-77-A5G7-01B 3 17 In-Frame Intra-chr q22.31 q22.31 Seq+ 95786 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA3D-KCNU1 SEMA3D chr7 85121741 - KCNU1 chr8 36864404 + Exonic hg38 LUSC TCGA-77-A5G7-01B 1 5 In-Frame Inter-chr q21.11 p11.23 Seq+ 95787 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFX1-NOL6 NFX1 chr9 33332502 + NOL6 chr9 33470191 - Exonic hg38 LUSC TCGA-77-A5GA-01A 2 4 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 95788 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIGAR-PRR4 TIGAR chr12 4331317 + PRR4 chr12 10848407 - Exonic hg38 LUSC TCGA-77-A5GB-01B 12 68 CDS-5'UTR Intra-chr p13.32 95789 ChimerSeq TCGA FAWG TCGA_RNA-Seq BICD1P1-IGHJ4 BICD1P1 chr2 200844312 + IGHJ4 chr14 105864258 - Exonic hg38 LUSC TCGA-77-A5GB-01B 22 0 Out-of-frame Inter-chr q33.1 95790 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAPSS2-BID PAPSS2 chr10 87709313 + BID chr22 17739488 - Exonic hg38 LUSC TCGA-77-A5GH-01A 10 16 In-Frame Inter-chr q23.2 q11.21 Seq+ 95791 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGAT3-SYNGR1 MGAT3 chr22 39457557 + SYNGR1 chr22 39374316 + Exonic hg38 LUSC TCGA-77-A5GH-01A 5 15 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 95792 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRABD2A-CHMP3 TRABD2A chr2 84832055 - CHMP3 chr2 86507593 - Exonic hg38 LUSC TCGA-77-A5GH-01A 5 9 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 95793 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATRX-LPAR4 ATRX chrX 77785982 - LPAR4 chrX 78751210 + Exonic hg38 LUSC TCGA-77-A5GH-01A 2 17 CDS-5'UTR Intra-chr q21.1 Oncogene q21.1 Seq+ 95794 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOL9-DNAJC11 NOL9 chr1 6549571 - DNAJC11 chr1 6654039 - Exonic hg38 LUSC TCGA-77-A5GH-01A 3 7 In-Frame Intra-chr p36.31 p36.31 Tumor suppressor gene Seq+ 95795 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLT1B-IAPP GOLT1B chr12 21508561 + IAPP chr12 21373337 + Exonic hg38 LUSC TCGA-77-A5GH-01A 2 7 CDS-5'UTR Intra-chr p12.1 p12.1 Seq+ 95796 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK8IP3-TMEM204 MAPK8IP3 chr16 1729578 + TMEM204 chr16 1554782 + Exonic hg38 LUSC TCGA-77-A5GH-01A 1 11 Out-of-frame Intra-chr p13.3 p13.3 95797 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANSL1-PARD3B KANSL1 chr17 46082441 - PARD3B chr2 205401013 + Exonic hg38 LUSC TCGA-77-A5GH-01A 1 10 5'UTR-CDS Inter-chr q33.3 95798 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBNL2-GLI3 MBNL2 chr13 97366553 + GLI3 chr7 42148468 - Exonic hg38 LUSC TCGA-77-A5GH-01A 2 6 Out-of-frame Inter-chr q32.1 Transcription factor p14.1 Transcription factor Seq+ 95799 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCYL3-KIFAP3 SCYL3 chr1 169873696 - KIFAP3 chr1 169954110 - Exonic hg38 LUSC TCGA-77-A5GH-01A 2 6 Out-of-frame Intra-chr q24.2 Other:SCY1 q24.2 Seq+ 95800 ChimerSeq TCGA FAWG TCGA_RNA-Seq POU2AF1-BTG4 POU2AF1 chr11 111379162 - BTG4 chr11 111498802 - Exonic hg38 LUSC TCGA-77-A5GH-01A 2 5 CDS-5'UTR Intra-chr q23.1 Transcription factor q23.1 Tumor suppressor gene Seq+ 95801 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLCO2A1-RYK SLCO2A1 chr3 134029707 - RYK chr3 134188923 - Exonic hg38 LUSC TCGA-77-A5GH-01A 2 5 Out-of-frame Intra-chr q22.2 q22.2 TK:Ryk Seq+ 95802 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID4B-SOX5 ARID4B chr1 235213769 - SOX5 chr12 23896024 - Exonic hg38 LUSC TCGA-77-A5GH-01A 1 7 In-Frame Inter-chr q42.3 p12.1 Transcription factor Seq+ 95803 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP39-GGCX USP39 chr2 85641118 + GGCX chr2 85559075 - Exonic hg38 LUSC TCGA-77-A5GH-01A 1 4 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 95804 ChimerSeq TCGA FAWG TCGA_RNA-Seq DESI2-C1orf101 DESI2 chr1 244689342 + C1orf101 chr1 244635489 + Exonic hg38 LUSC TCGA-77-A5GH-01A 1 3 Out-of-frame Intra-chr q44 95805 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOP58-KIAA2012 NOP58 chr2 202291270 + KIAA2012 chr2 202193301 + Exonic hg38 LUSC TCGA-77-A5GH-01A 1 3 In-Frame Intra-chr q33.1 q33.1 95806 ChimerSeq TCGA FAWG TCGA_RNA-Seq E2F5-LRRCC1 E2F5 chr8 85177654 + LRRCC1 chr8 85109595 + Exonic hg38 LUSC TCGA-77-A5GH-01A 1 2 Out-of-frame Intra-chr q21.2 Transcription factor q21.2 95807 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0355-C19orf47 KIAA0355 chr19 34300968 + C19orf47 chr19 40341890 - Exonic hg38 LUSC TCGA-77-A5GH-01A 1 2 3'UTR-3'UTR Intra-chr q13.2 95808 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRX2-NTMT1 PRRX2 chr9 129666126 + NTMT1 chr9 129632650 + Exonic hg38 LUSC TCGA-77-A5GH-01A 1 2 CDS-5'UTR Intra-chr q34.11 Transcription factor q34.11 95809 ChimerSeq TCGA FAWG TCGA_RNA-Seq SREK1-ST6GAL1 SREK1 chr5 66153596 + ST6GAL1 chr3 187038742 + Exonic hg38 LUSC TCGA-79-5596-01A 5 16 5'UTR-5'UTR Inter-chr q12.3 q27.3 Seq+ 95810 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL10-UBP1 OSBPL10 chr3 31980899 - UBP1 chr3 33425741 - Exonic hg38 LUSC TCGA-79-5596-01A 1 13 In-Frame Intra-chr p22.3 p22.3 Transcription factor 95811 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDIA6-FBRSL1 PDIA6 chr2 10793096 - FBRSL1 chr12 132525734 + Exonic hg38 LUSC TCGA-79-5596-01A 2 6 In-Frame Inter-chr p25.1 q24.33 95812 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCTN2-DDX23 DCTN2 chr12 57546028 - DDX23 chr12 48836266 - Exonic hg38 LUSC TCGA-85-6175-01A 106 378 In-Frame Intra-chr q13.3 q13.12 Seq+ 95813 ChimerSeq TCGA FAWG TCGA_RNA-Seq BORCS5-PTPRR BORCS5 chr12 12361349 + PTPRR chr12 70701323 - Exonic hg38 LUSC TCGA-85-6175-01A 10 61 3'UTR-CDS Intra-chr q15 95814 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A36-PEX5L SLC25A36 chr3 140942095 + PEX5L chr3 179816004 - Exonic hg38 LUSC TCGA-85-6175-01A 7 31 Out-of-frame Intra-chr q23 q26.33 Seq+ 95815 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSC22D2-ADCY5 TSC22D2 chr3 150411308 + ADCY5 chr3 123352581 - Exonic hg38 LUSC TCGA-85-6175-01A 3 8 Out-of-frame Intra-chr q25.1 q21.1 Seq+ 95816 ChimerSeq TCGA FAWG TCGA_RNA-Seq P4HB-COL1A2 P4HB chr17 81845871 - COL1A2 chr7 94411056 + Exonic hg38 LUSC TCGA-85-6175-01A 1 12 Out-of-frame Inter-chr q25.3 q21.3 95817 ChimerSeq TCGA FAWG TCGA_RNA-Seq TARS2-VPS45 TARS2 chr1 150492489 + VPS45 chr1 150144709 + Exonic hg38 LUSC TCGA-85-6560-01A 25 129 In-Frame Intra-chr q21.2 q21.2 Seq+ 95818 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABHD12B-RNASE1 ABHD12B chr14 50881626 + RNASE1 chr14 20803004 - Exonic hg38 LUSC TCGA-85-6560-01A 27 43 CDS-5'UTR Intra-chr q22.1 q11.2 Seq+ 95819 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2H1-PSMA1 GTF2H1 chr11 18339657 + PSMA1 chr11 14505248 - Exonic hg38 LUSC TCGA-85-6560-01A 5 26 Out-of-frame Intra-chr p15.1 p15.2 Seq+ 95820 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR99AHG-MIR548XHG MIR99AHG chr21 16391685 + MIR548XHG chr21 18589620 - Exonic hg38 LUSC TCGA-85-6560-01A 1 12 5'UTR-3'UTR Intra-chr q21.1 q21.1 95821 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIAS2-IGKJ1 PIAS2 chr18 46808092 - IGKJ1 chr2 88861923 - Exonic hg38 LUSC TCGA-85-6561-01A 135 0 Out-of-frame Inter-chr q21.1 p11.2 95822 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP1B-PTCD2 MAP1B chr5 72115799 + PTCD2 chr5 72322172 + Exonic hg38 LUSC TCGA-85-6798-01A 2 9 In-Frame Intra-chr q13.2 q13.2 Seq+ 95823 ChimerSeq TCGA FAWG TCGA_RNA-Seq CENPQ-MUT CENPQ chr6 49488684 + MUT chr6 49459505 - Exonic hg38 LUSC TCGA-85-6798-01A 2 6 Out-of-frame Intra-chr p12.3 p12.3 Seq+ 95824 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNPEP-TNKS DNPEP chr2 219386286 - TNKS chr8 9734865 + Exonic hg38 LUSC TCGA-85-7696-01A 8 40 CDS-5'UTR Inter-chr q35 p23.1 Seq+ 95825 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF3D-MYH9 EIF3D chr22 36529076 - MYH9 chr22 36286846 - Exonic hg38 LUSC TCGA-85-7696-01A 4 40 5'UTR-CDS Intra-chr q12.3 q12.3 Oncogene Tumor suppressor gene Seq+ 95826 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOMO1-CSNK1A1 NOMO1 chr16 14896114 + CSNK1A1 chr5 149507133 - Exonic hg38 LUSC TCGA-85-7696-01A 4 10 5'UTR-CDS Inter-chr q32 Tumor suppressor gene Seq+ 95827 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTSS1-FBXO32 MTSS1 chr8 124699526 - FBXO32 chr8 123506574 - Exonic hg38 LUSC TCGA-85-7696-01A 2 3 Out-of-frame Intra-chr q24.13 Tumor suppressor gene q24.13 Tumor suppressor gene 95828 ChimerSeq TCGA FAWG TCGA_RNA-Seq GIPC1-UBE2D2 GIPC1 chr19 14491656 - UBE2D2 chr5 139600372 + Exonic hg38 LUSC TCGA-85-7696-01A 1 1 5'UTR-5'UTR Inter-chr p13.12 q31.2 95829 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK1-SSU72 MAPK1 chr22 21867322 - SSU72 chr1 1545002 - Exonic hg38 LUSC TCGA-85-7697-01A 9 31 In-Frame Inter-chr q11.22 Oncogene p36.33 Seq+ 95830 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP1A1-SORT1 ATP1A1 chr1 116387491 + SORT1 chr1 109369589 - Exonic hg38 LUSC TCGA-85-7697-01A 5 14 In-Frame Intra-chr p13.1 p13.3 Seq+ 95831 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGSF3-PARL IGSF3 chr1 116579392 - PARL chr3 183829709 - Exonic hg38 LUSC TCGA-85-7698-01A 9 28 Out-of-frame Inter-chr p13.1 q27.1 Seq+ 95832 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO1-FGF19 ANO1 chr11 70180056 + FGF19 chr11 69703364 - Exonic hg38 LUSC TCGA-85-7699-01A 10 50 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 95833 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIRREL-CD1A KIRREL chr1 157993728 + CD1A chr1 158255084 + Exonic hg38 LUSC TCGA-85-7710-01A 10 64 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 95834 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND1A-RRAGB DENND1A chr9 123878951 - RRAGB chrX 55719314 + Exonic hg38 LUSC TCGA-85-7710-01A 2 12 Out-of-frame Inter-chr q33.3 p11.21 Seq+ 95835 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASA1-RGS18 RASA1 chr5 87378538 + RGS18 chr1 192158631 + Exonic hg38 LUSC TCGA-85-7710-01A 1 2 CDS-5'UTR Inter-chr q14.3 q31.2 95836 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASSF7-DEAF1 RASSF7 chr11 561033 + DEAF1 chr11 654051 - Exonic hg38 LUSC TCGA-85-7843-01A 13 18 3'UTR-5'UTR Intra-chr p15.5 Transcription factor Seq+ 95837 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED29-ADAM18 MED29 chr19 39393637 + ADAM18 chr8 39692600 + Exonic hg38 LUSC TCGA-85-7843-01A 4 39 CDS-3'UTR Inter-chr q13.2 Seq+ 95838 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK11-IL13RA1 DOCK11 chrX 118496073 + IL13RA1 chrX 118741017 + Exonic hg38 LUSC TCGA-85-7843-01A 7 4 Out-of-frame Intra-chr q24 q24 Seq+ 95839 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASCC3-SIM1 ASCC3 chr6 100589634 - SIM1 chr6 100453844 - Exonic hg38 LUSC TCGA-85-7843-01A 1 6 Out-of-frame Intra-chr q16.3 q16.3 Transcription factor 95840 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D8-EPB41L5 TBC1D8 chr2 101090254 - EPB41L5 chr2 120127688 + Exonic hg38 LUSC TCGA-85-7843-01A 2 2 Out-of-frame Intra-chr q11.2 q14.2 95841 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHNAK2-CD244 AHNAK2 chr14 104970456 - CD244 chr1 160841901 - Exonic hg38 LUSC TCGA-85-7844-01A 10 4 5'UTR-CDS Inter-chr q32.33 q23.3 Seq+ 95842 ChimerSeq TCGA FAWG TCGA_RNA-Seq RELT-PAAF1 RELT chr11 73392468 + PAAF1 chr11 73909399 + Exonic hg38 LUSC TCGA-85-7950-01A 12 42 In-Frame Intra-chr q13.4 q13.4 Seq+ 95843 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNPO2-HOOK2 TNPO2 chr19 12710621 - HOOK2 chr19 12766240 - Exonic hg38 LUSC TCGA-85-7950-01A 2 2 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 95844 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDC4-NRG1 SDC4 chr20 45330366 - NRG1 chr8 32727949 + Exonic hg38 LUSC TCGA-85-7950-01A 1 4 In-Frame Inter-chr q13.12 p12 KB Pub Seq+ 95845 ChimerSeq TCGA FAWG TCGA_RNA-Seq GZMM-HNRNPM GZMM chr19 547436 + HNRNPM chr19 8488691 + Exonic hg38 LUSC TCGA-85-8048-01A 4 11 Out-of-frame Intra-chr p13.3 p13.2 Seq+ 95846 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMAT5-HIRA ZMAT5 chr22 29738330 - HIRA chr22 19331556 - Exonic hg38 LUSC TCGA-85-8048-01A 2 7 Out-of-frame Intra-chr q12.2 q11.21 Tumor suppressor gene Seq+ 95847 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF2-MORC2 NF2 chr22 29604112 + MORC2 chr22 30950445 - Exonic hg38 LUSC TCGA-85-8048-01A 1 8 Out-of-frame Intra-chr q12.2 Oncogene Tumor suppressor gene q12.2 95848 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK1-ABHD3 ROCK1 chr18 21110818 - ABHD3 chr18 21664230 - Exonic hg38 LUSC TCGA-85-8048-01A 1 3 In-Frame Intra-chr q11.1 AGC:DMPK q11.2 Seq+ 95849 ChimerSeq TCGA FAWG TCGA_RNA-Seq KHSRP-ZNF441 KHSRP chr19 6421278 - ZNF441 chr19 11778330 + Exonic hg38 LUSC TCGA-85-8052-01A 1 3 Out-of-frame Intra-chr p13.3 p13.2 Transcription factor 95850 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP39-GNLY USP39 chr2 85641012 + GNLY chr2 85683172 + Exonic hg38 LUSC TCGA-85-8052-01A 1000 1000 Out-of-frame Intra-chr p11.2 p11.2 95851 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP48-MAN1C1 USP48 chr1 21782824 - MAN1C1 chr1 25783663 + Exonic hg38 LUSC TCGA-85-8070-01A 133 943 In-Frame Intra-chr p36.12 p36.11 Seq+ 95852 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP48-SELENON USP48 chr1 21782824 - SELENON chr1 25805142 + Exonic hg38 LUSC TCGA-85-8070-01A 10 77 Out-of-frame Intra-chr p36.12 p36.11 95853 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDHD2-EIF4EBP1 DDHD2 chr8 38253718 + EIF4EBP1 chr8 38057081 + Exonic hg38 LUSC TCGA-85-8070-01A 4 36 Out-of-frame Intra-chr p11.23 p11.23 Seq+ 95854 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAPP1-SLC4A4 DAPP1 chr4 99853348 + SLC4A4 chr4 71534227 + Exonic hg38 LUSC TCGA-85-8070-01A 6 23 In-Frame Intra-chr q23 q13.3 Seq+ 95855 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC186-GFRA1 CCDC186 chr10 114134913 - GFRA1 chr10 116125557 - Exonic hg38 LUSC TCGA-85-8070-01A 1 7 Out-of-frame Intra-chr q25.3 q25.3 95856 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHST9-DLGAP3 CHST9 chr18 27024116 - DLGAP3 chr1 34907437 - Exonic hg38 LUSC TCGA-85-8071-01A 5 19 CDS-5'UTR Inter-chr q11.2 p34.3 Seq+ 95857 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL17A1-CFAP43 COL17A1 chr10 104043501 - CFAP43 chr10 104225557 - Exonic hg38 LUSC TCGA-85-8071-01A 2 30 In-Frame Intra-chr q25.1 q25.1 95858 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTAF1-MARCH5 BTAF1 chr10 91924090 + 2019_ 3_ 5_ chr10 92311135 + Exonic hg38 LUSC TCGA-85-8071-01A 3 4 Out-of-frame Intra-chr q23.32 q23.32 Seq+ 95859 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF2-CHRNA1 ATF2 chr2 175080660 - CHRNA1 chr2 174759633 - Exonic hg38 LUSC TCGA-85-8072-01A 1 6 In-Frame Intra-chr q31.1 Transcription factor q31.1 95860 ChimerSeq TCGA FAWG TCGA_RNA-Seq PNO1-SHROOM3 PNO1 chr2 68158529 + SHROOM3 chr4 76555609 + Exonic hg38 LUSC TCGA-85-8072-01A 1 4 In-Frame Inter-chr p14 q21.1 95861 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPD1L-CMTM7 GPD1L chr3 32146734 + CMTM7 chr3 32441840 + Exonic hg38 LUSC TCGA-85-8276-01A 8 36 In-Frame Intra-chr p22.3 p22.3 Seq+ 95862 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHNAK-DPF2 AHNAK chr11 62491732 - DPF2 chr11 65348850 + Exonic hg38 LUSC TCGA-85-8276-01A 4 20 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q13.1 Seq+ 95863 ChimerSeq TCGA FAWG TCGA_RNA-Seq PACS1-CHKA PACS1 chr11 66070842 + CHKA chr11 68054047 - Exonic hg38 LUSC TCGA-85-8276-01A 5 8 Out-of-frame Intra-chr q13.1 q13.2 Seq+ 95864 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGHG3-COL1A1 IGHG3 chr14 105770293 - COL1A1 chr17 50190380 - Exonic hg38 LUSC TCGA-85-8276-01A 1 17 Out-of-frame Inter-chr q21.33 Oncogene 95865 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R12A-TBC1D30 PPP1R12A chr12 79934695 - TBC1D30 chr12 64785881 + Exonic hg38 LUSC TCGA-85-8276-01A 2 4 CDS-5'UTR Intra-chr q21.31 q14.3 Seq+ 95866 ChimerSeq TCGA FAWG TCGA_RNA-Seq PROSC-ZNF622 PROSC chr8 37766355 + ZNF622 chr5 16463270 - Exonic hg38 LUSC TCGA-85-8276-01A 1 8 Out-of-frame Inter-chr p15.1 95867 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTPBP1-FAM227A GTPBP1 chr22 38730881 + FAM227A chr22 38638822 - Exonic hg38 LUSC TCGA-85-8276-01A 1 7 3'UTR-CDS Intra-chr q13.1 q13.1 95868 ChimerSeq TCGA FAWG TCGA_RNA-Seq LTV1-EPM2A LTV1 chr6 143846224 + EPM2A chr6 145502575 - Exonic hg38 LUSC TCGA-85-8276-01A 1 7 CDS-3'UTR Intra-chr q24.2 q24.3 95869 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD8-PACS1 FRMD8 chr11 65399859 + PACS1 chr11 66210362 + Exonic hg38 LUSC TCGA-85-8276-01A 1 6 In-Frame Intra-chr q13.1 q13.1 95870 ChimerSeq TCGA FAWG TCGA_RNA-Seq TENM4-NOX4 TENM4 chr11 79215808 - NOX4 chr11 89498187 - Exonic hg38 LUSC TCGA-85-8276-01A 1 3 5'UTR-5'UTR Intra-chr q14.1 q14.3 95871 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHGDH-HMGCS2 PHGDH chr1 119740518 + HMGCS2 chr1 119752674 - Exonic hg38 LUSC TCGA-85-8277-01A 54 279 In-Frame Intra-chr p12 p12 Seq+ 95872 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIRT6-CREB3L3 SIRT6 chr19 4180782 - CREB3L3 chr19 4156998 + Exonic hg38 LUSC TCGA-85-8277-01A 6 71 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p13.3 Transcription factor Seq+ 95873 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH2-SEC22B NOTCH2 chr1 119996997 - SEC22B chr1 120157192 - Exonic hg38 LUSC TCGA-85-8277-01A 1 41 In-Frame Intra-chr p12 Oncogene Tumor suppressor gene p12 Seq+ 95874 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASA2-KALRN RASA2 chr3 141487216 + KALRN chr3 124298791 + Exonic hg38 LUSC TCGA-85-8277-01A 2 14 Out-of-frame Intra-chr q23 q21.1 Seq+ 95875 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF335-NCOA5 ZNF335 chr20 45948903 - NCOA5 chr20 46065228 - Exonic hg38 LUSC TCGA-85-8277-01A 3 4 3'UTR-CDS Intra-chr q13.12 Transcription factor q13.12 Tumor suppressor gene Seq+ 95876 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIT-SLC4A4 KIT chr4 54733192 + SLC4A4 chr4 71236576 + Exonic hg38 LUSC TCGA-85-8287-01A 2 32 CDS-5'UTR Intra-chr q12 TK:PDGFR Oncogene q13.3 Seq+ 95877 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGLV1-IGLC6 IGLV1 chr22 22327671 + IGLC6 chr22 22919535 + Exonic hg38 LUSC TCGA-85-8350-01A 3 4 Out-of-frame Intra-chr q11.22 95878 ChimerSeq TCGA FAWG TCGA_RNA-Seq PATJ-ELDR PATJ chr1 61742555 + ELDR chr7 55238666 - Exonic hg38 LUSC TCGA-85-8351-01A 23 223 5'UTR-3'UTR Inter-chr p31.3 95879 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNI-MRPL1 CCNI chr4 77075472 - MRPL1 chr4 77949797 + Exonic hg38 LUSC TCGA-85-8351-01A 12 107 In-Frame Intra-chr q21.1 q21.1 Seq+ 95880 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGGY-CASC11 FGGY chr1 59457076 + CASC11 chr8 127689423 - Exonic hg38 LUSC TCGA-85-8351-01A 2 15 CDS-3'UTR Inter-chr p32.1 q24.21 Seq+ 95881 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRPK2-LRP5 SRPK2 chr7 105388648 - LRP5 chr11 68446436 + Exonic hg38 LUSC TCGA-85-8352-01A 25 80 Out-of-frame Inter-chr q22.3 CMGC:SRPK q13.2 Seq+ 95882 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHB-SLC22A20 SHB chr9 37974622 - SLC22A20 chr11 65241990 + Exonic hg38 LUSC TCGA-85-8352-01A 12 46 Out-of-frame Inter-chr p13.1 q13.1 Seq+ 95883 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB20-SH3BGRL ZBTB20 chr3 114801101 - SH3BGRL chrX 81276984 + Exonic hg38 LUSC TCGA-85-8352-01A 2 4 5'UTR-CDS Inter-chr q13.31 Transcription factor q21.1 Seq+ 95884 ChimerSeq TCGA FAWG TCGA_RNA-Seq TYMS-YES1 TYMS chr18 662320 + YES1 chr18 732965 - Exonic hg38 LUSC TCGA-85-8353-01A 28 147 In-Frame Intra-chr p11.32 p11.32 Seq+ 95885 ChimerSeq TCGA FAWG TCGA_RNA-Seq TJAP1-ABCC10 TJAP1 chr6 43478718 + ABCC10 chr6 43441862 + Exonic hg38 LUSC TCGA-85-8353-01A 6 27 5'UTR-5'UTR Intra-chr p21.1 p21.1 Seq+ 95886 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX30-RPLP1 DHX30 chr3 47843255 + RPLP1 chr15 69452831 + Exonic hg38 LUSC TCGA-85-8354-01A 30 72 CDS-5'UTR Inter-chr p21.31 q23 Seq+ 95887 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNQ5-AMPH KCNQ5 chr6 73105367 + AMPH chr7 38394214 - Exonic hg38 LUSC TCGA-85-8354-01A 7 37 In-Frame Inter-chr q13 p14.1 Seq+ 95888 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXT2-PRMT9 EXT2 chr11 44130138 + PRMT9 chr4 147680471 - Exonic hg38 LUSC TCGA-85-8354-01A 6 17 In-Frame Inter-chr p11.2 Oncogene Tumor suppressor gene q31.23 95889 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZPBP-SUGCT ZPBP chr7 50081774 - SUGCT chr7 40749434 + Exonic hg38 LUSC TCGA-85-8354-01A 1 27 Out-of-frame Intra-chr p12.2 p14.1 95890 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRIP1-XCL1 GRIP1 chr12 66539078 - XCL1 chr1 168581052 + Exonic hg38 LUSC TCGA-85-8354-01A 5 5 Out-of-frame Inter-chr q14.3 q24.2 Seq+ 95891 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIBP1-ZNF329 PPFIBP1 chr12 27660945 + ZNF329 chr19 58132676 - Exonic hg38 LUSC TCGA-85-8354-01A 1 10 CDS-5'UTR Inter-chr p11.23 q13.43 Transcription factor 95892 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAF1-OSBPL9 FAF1 chr1 50959767 - OSBPL9 chr1 51765822 + Exonic hg38 LUSC TCGA-85-8355-01A 2 13 Out-of-frame Intra-chr p32.3 p32.3 Seq+ 95893 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIN-STXBP6 NIN chr14 50735516 - STXBP6 chr14 24857157 - Exonic hg38 LUSC TCGA-85-8355-01A 2 2 Out-of-frame Intra-chr q22.1 Oncogene q12 Seq+ 95894 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAV1-PELI2 SAV1 chr14 50644744 - PELI2 chr14 56178335 + Exonic hg38 LUSC TCGA-85-8355-01A 1 4 In-Frame Intra-chr q22.1 q22.3 95895 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHMP3-REEP1 CHMP3 chr2 86563304 - REEP1 chr2 86232802 - Exonic hg38 LUSC TCGA-85-8355-01A 1 3 In-Frame Intra-chr p11.2 p11.2 95896 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPPL3-ACADS SPPL3 chr12 120903845 - ACADS chr12 120727026 + Exonic hg38 LUSC TCGA-85-8479-01A 14 29 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 95897 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGA-SPTBN5 MGA chr15 41760529 + SPTBN5 chr15 41857710 - Exonic hg38 LUSC TCGA-85-8479-01A 10 34 In-Frame Intra-chr q15.1 Transcription factor q15.1 Seq+ 95898 ChimerSeq TCGA FAWG TCGA_RNA-Seq THRA-PSMD3 THRA chr17 40084815 + PSMD3 chr17 39986575 + Exonic hg38 LUSC TCGA-85-8479-01A 2 39 In-Frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Seq+ 95899 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPPL3-UNC119B SPPL3 chr12 120903845 - UNC119B chr12 120719920 + Exonic hg38 LUSC TCGA-85-8479-01A 5 11 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 95900 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBQLN4-MEF2D UBQLN4 chr1 156053594 - MEF2D chr1 156483430 - Exonic hg38 LUSC TCGA-85-8479-01A 1 13 CDS-5'UTR Intra-chr q22 q22 Transcription factor Seq+ 95901 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTBN5-MGA SPTBN5 chr15 41861419 - MGA chr15 41761739 + Exonic hg38 LUSC TCGA-85-8479-01A 1 3 In-Frame Intra-chr q15.1 q15.1 Transcription factor 95902 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPBL-KHDC1 NIPBL chr5 37049301 + KHDC1 chr6 73292040 - Exonic hg38 LUSC TCGA-85-8479-01A 1000 1000 Out-of-frame Inter-chr p13.2 q13 95903 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM175-IDUA TMEM175 chr4 932540 + IDUA chr4 1000612 + Exonic hg38 LUSC TCGA-85-8479-01A 1000 1000 5'UTR-5'UTR Intra-chr p16.3 p16.3 95904 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD6-CASP8AP2 ANKRD6 chr6 89433375 + CASP8AP2 chr6 89871289 + Exonic hg38 LUSC TCGA-85-8481-01A 1 8 5'UTR-3'UTR Intra-chr q15 q15 95905 ChimerSeq TCGA FAWG TCGA_RNA-Seq FXR1-MCCC1 FXR1 chr3 180912736 + MCCC1 chr3 183072487 - Exonic hg38 LUSC TCGA-85-8580-01A 85 101 In-Frame Intra-chr q26.33 q27.1 Seq+ 95906 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM10-ERAS RBM10 chrX 47147498 + ERAS chrX 48829081 + Exonic hg38 LUSC TCGA-85-8580-01A 5 38 CDS-5'UTR Intra-chr p11.3 p11.23 Seq+ 95907 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPIPP1-GAREM1 NPIPP1 chr16 15118926 - GAREM1 chr18 32393035 - Exonic hg38 LUSC TCGA-85-8582-01A 10 7 Out-of-frame Inter-chr p13.11 q12.1 95908 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDXK-EYS PDXK chr21 43756054 + EYS chr6 64307082 - Exonic hg38 LUSC TCGA-85-8582-01A 4 31 Out-of-frame Inter-chr q22.3 q12 Seq+ 95909 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM2A-TEKT4P2 KDM2A chr11 67121358 + TEKT4P2 chr21 9070444 - Exonic hg38 LUSC TCGA-85-8582-01A 2 9 CDS-3'UTR Inter-chr q13.2 Transcription factor p11.2 Seq+ 95910 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGK-TGFBR3 PIGK chr1 77122275 - TGFBR3 chr1 91722144 - Exonic hg38 LUSC TCGA-85-8582-01A 3 3 In-Frame Intra-chr p31.1 p22.1 Tumor suppressor gene Seq+ 95911 ChimerSeq TCGA FAWG TCGA_RNA-Seq C11orf80-PPP6R3 C11orf80 chr11 66744919 + PPP6R3 chr11 68519501 + Exonic hg38 LUSC TCGA-85-8582-01A 1 3 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 95912 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1551-ITPR2 KIAA1551 chr12 31960871 + ITPR2 chr12 26387594 - Exonic hg38 LUSC TCGA-85-8584-01A 5 61 Out-of-frame Intra-chr p11.21 p11.23 Seq+ 95913 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPSB2-DYRK4 SPSB2 chr12 6872275 - DYRK4 chr12 4562254 + Exonic hg38 LUSC TCGA-85-8584-01A 8 18 Out-of-frame Intra-chr p13.31 p13.32 CMGC:DYRK Seq+ 95914 ChimerSeq TCGA FAWG TCGA_RNA-Seq PC-KDM2A PC chr11 66952430 - KDM2A chr11 67245189 + Exonic hg38 LUSC TCGA-85-8584-01A 4 31 5'UTR-5'UTR Intra-chr q13.2 q13.2 Transcription factor Seq+ 95915 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIST4H4-CLEC1A HIST4H4 chr12 14770679 - CLEC1A chr12 10081413 - Exonic hg38 LUSC TCGA-85-8584-01A 2 21 3'UTR-CDS Intra-chr p12.3 p13.2 Seq+ 95916 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD51AP1-ATN1 RAD51AP1 chr12 4548836 + ATN1 chr12 6937845 + Exonic hg38 LUSC TCGA-85-8584-01A 2 9 Out-of-frame Intra-chr p13.32 p13.31 Seq+ 95917 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC23-LPCAT3 LRRC23 chr12 6906662 + LPCAT3 chr12 6983539 - Exonic hg38 LUSC TCGA-85-8584-01A 2 5 In-Frame Intra-chr p13.31 p13.31 Seq+ 95918 ChimerSeq TCGA FAWG TCGA_RNA-Seq IRAK2-GHRL IRAK2 chr3 10219789 + GHRL chr3 10290990 - Exonic hg38 LUSC TCGA-85-8584-01A 1000 1000 CDS-5'UTR Intra-chr p25.3 TKL:IRAK p25.3 95919 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGAPB-CTCFL RALGAPB chr20 38539958 + CTCFL chr20 57519377 - Exonic hg38 LUSC TCGA-85-8664-01A 7 14 Out-of-frame Intra-chr q11.23 q13.31 Tumor suppressor gene Transcription factor Seq+ 95920 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC2A10-ACSS2 SLC2A10 chr20 46709740 + ACSS2 chr20 34913096 + Exonic hg38 LUSC TCGA-85-8664-01A 6 14 Out-of-frame Intra-chr q13.12 q11.22 Seq+ 95921 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMP7-PIGU BMP7 chr20 57265705 - PIGU chr20 34588607 - Exonic hg38 LUSC TCGA-85-8664-01A 4 11 Out-of-frame Intra-chr q13.31 q11.22 Seq+ 95922 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM65-EXT1 TMEM65 chr8 124371854 - EXT1 chr8 117837201 - Exonic hg38 LUSC TCGA-85-8664-01A 4 5 Out-of-frame Intra-chr q24.13 q24.11 Oncogene Tumor suppressor gene Seq+ 95923 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYEOV-IFITM9P MYEOV chr11 69294576 + IFITM9P chr11 69303766 - Exonic hg38 LUSC TCGA-85-8664-01A 3 6 Out-of-frame Intra-chr q13.3 q13.3 95924 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKM-CELF6 PKM chr15 72231116 - CELF6 chr15 72290255 - Exonic hg38 LUSC TCGA-85-8664-01A 1 7 5'UTR-CDS Intra-chr q23 q23 95925 ChimerSeq TCGA FAWG TCGA_RNA-Seq FYTTD1-RPL35A FYTTD1 chr3 197777001 + RPL35A chr3 197954003 + Exonic hg38 LUSC TCGA-85-8664-01A 1 3 In-Frame Intra-chr q29 q29 95926 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLLT3-PLGRKT MLLT3 chr9 20620654 - PLGRKT chr9 5361888 - Exonic hg38 LUSC TCGA-85-A4CL-01A 4 2 Out-of-frame Intra-chr p21.3 p24.1 95927 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASC15-CAP2 CASC15 chr6 22020542 + CAP2 chr6 17462996 + Exonic hg38 LUSC TCGA-85-A4CL-01A 1 8 5'UTR-CDS Intra-chr p22.3 p22.3 95928 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRK-STX8 CRK chr17 1455877 - STX8 chr17 9250645 - Exonic hg38 LUSC TCGA-85-A4CN-01A 5 14 5'UTR-CDS Intra-chr p13.3 p13.1 Seq+ 95929 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBX1-EIF4A1 RBX1 chr22 40967884 + EIF4A1 chr17 7578227 + Exonic hg38 LUSC TCGA-85-A4CN-01A 2 10 Out-of-frame Inter-chr q13.2 p13.1 Seq+ 95930 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMKK1-ITGAE CAMKK1 chr17 3892939 - ITGAE chr17 3759553 - Exonic hg38 LUSC TCGA-85-A4CN-01A 3 2 5'UTR-CDS Intra-chr p13.2 p13.2 95931 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM83B-COL21A1 FAM83B chr6 54870690 + COL21A1 chr6 56101525 - Exonic hg38 LUSC TCGA-85-A4CN-01A 1 4 In-Frame Intra-chr p12.1 p12.1 Seq+ 95932 ChimerSeq TCGA FAWG TCGA_RNA-Seq COG5-C7orf66 COG5 chr7 107298142 - C7orf66 chr7 108884584 - Exonic hg38 LUSC TCGA-85-A4JB-01A 8 19 5'UTR-5'UTR Intra-chr q31.1 Seq+ 95933 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPIG-FAM117B PPIG chr2 169633247 + FAM117B chr2 202724917 + Exonic hg38 LUSC TCGA-85-A4JB-01A 3 20 In-Frame Intra-chr q31.1 q33.2 Seq+ 95934 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAZ2B-CYBRD1 BAZ2B chr2 159615394 - CYBRD1 chr2 171541585 + Exonic hg38 LUSC TCGA-85-A4JB-01A 1 14 5'UTR-CDS Intra-chr q24.2 Transcription factor q31.1 Seq+ 95935 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K5-PERP MAP3K5 chr6 136791710 - PERP chr6 138096494 - Exonic hg38 LUSC TCGA-85-A4JB-01A 1 1 In-Frame Intra-chr q23.3 STE:STE11 q23.3 Seq+ 95936 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUFIP1-FAAH NUFIP1 chr13 44959381 - FAAH chr1 46413447 + Exonic hg38 LUSC TCGA-85-A4JC-01A 9 23 Out-of-frame Inter-chr q14.12 p33 Seq+ 95937 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-RBFOX2 PPFIA1 chr11 70272436 + RBFOX2 chr22 35768349 - Exonic hg38 LUSC TCGA-85-A4QQ-01A 14 121 5'UTR-5'UTR Inter-chr q13.3 Seq+ 95938 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-SHANK2 PPFIA1 chr11 70339304 + SHANK2 chr11 71110051 - Exonic hg38 LUSC TCGA-85-A4QQ-01A 16 97 Out-of-frame Intra-chr q13.3 q13.4 Seq+ 95939 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2D2-ARHGAP26 UBE2D2 chr5 139614966 + ARHGAP26 chr5 143054439 + Exonic hg38 LUSC TCGA-85-A4QQ-01A 3 21 In-Frame Intra-chr q31.2 q31.3 Seq+ 95940 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAF7-LRRC1 TRAF7 chr16 2165936 + LRRC1 chr6 53878993 + Exonic hg38 LUSC TCGA-85-A4QR-01A 33 181 In-Frame Inter-chr p13.3 Oncogene p12.1 Seq+ 95941 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFAS1-CNTNAP2 ZFAS1 chr20 49280964 + CNTNAP2 chr7 147485935 + Exonic hg38 LUSC TCGA-85-A4QR-01A 4 7 5'UTR-3'UTR Inter-chr q13.13 Tumor suppressor gene Tumor suppressor gene Seq+ 95942 ChimerSeq TCGA FAWG TCGA_RNA-Seq C19orf12-ZNF749 C19orf12 chr19 29701174 - ZNF749 chr19 57438374 + Exonic hg38 LUSC TCGA-85-A4QR-01A 3 5 Out-of-frame Intra-chr q12 q13.43 Transcription factor Seq+ 95943 ChimerSeq TCGA FAWG TCGA_RNA-Seq ECD-PCDH15 ECD chr10 73134603 - PCDH15 chr10 54236931 - Exonic hg38 LUSC TCGA-85-A4QR-01A 2 4 Out-of-frame Intra-chr q22.2 q21.1 Seq+ 95944 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIRT1-DNAJC12 SIRT1 chr10 67891554 + DNAJC12 chr10 67823392 - Exonic hg38 LUSC TCGA-85-A50M-01A 31 204 In-Frame Intra-chr q21.3 Tumor suppressor gene q21.3 Seq+ 95945 ChimerSeq TCGA FAWG TCGA_RNA-Seq G3BP1-PCDH9 G3BP1 chr5 151786715 + PCDH9 chr13 66305028 - Exonic hg38 LUSC TCGA-85-A50M-01A 22 106 Out-of-frame Inter-chr q33.1 q21.32 Tumor suppressor gene Seq+ 95946 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD1-C11orf58 NSD1 chr5 177239865 + C11orf58 chr11 16744601 + Exonic hg38 LUSC TCGA-85-A50M-01A 12 94 In-Frame Inter-chr q35.3 Oncogene p15.2 Seq+ 95947 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDHAF2-FNBP4 SDHAF2 chr11 61430182 + FNBP4 chr11 47723316 - Exonic hg38 LUSC TCGA-85-A50M-01A 15 39 CDS-5'UTR Intra-chr q12.2 p11.2 Seq+ 95948 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D22A-FBLN1 TBC1D22A chr22 46797620 + FBLN1 chr22 45550492 + Exonic hg38 LUSC TCGA-85-A50M-01A 7 31 In-Frame Intra-chr q13.31 q13.31 Tumor suppressor gene Seq+ 95949 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDLRAD3-SNCB LDLRAD3 chr11 36098461 + SNCB chr5 176626761 - Exonic hg38 LUSC TCGA-85-A50M-01A 4 31 In-Frame Inter-chr p13 q35.2 Seq+ 95950 ChimerSeq TCGA FAWG TCGA_RNA-Seq LINGO2-TLN1 LINGO2 chr9 28475940 - TLN1 chr9 35708484 - Exonic hg38 LUSC TCGA-85-A50M-01A 1 8 5'UTR-CDS Intra-chr p21.1 p13.3 Seq+ 95951 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRMT3-TCN1 PRMT3 chr11 20464546 + TCN1 chr11 59861682 - Exonic hg38 LUSC TCGA-85-A50M-01A 2 4 Out-of-frame Intra-chr p15.1 Transcription factor q12.1 95952 ChimerSeq TCGA FAWG TCGA_RNA-Seq P4HA1-MSS51 P4HA1 chr10 73072029 - MSS51 chr10 73428301 - Exonic hg38 LUSC TCGA-85-A50M-01A 1 3 CDS-5'UTR Intra-chr q22.1 q22.2 95953 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDH2-LRBA ALDH2 chr12 111800063 + LRBA chr4 150872755 - Exonic hg38 LUSC TCGA-85-A50Z-01A 2 6 In-Frame Inter-chr q24.12 q31.3 Seq+ 95954 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFNA3-CKS1B EFNA3 chr1 155087469 + CKS1B chr1 154978797 + Exonic hg38 LUSC TCGA-85-A50Z-01A 1000 1000 Out-of-frame Intra-chr q21.3 q21.3 Oncogene 95955 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K10-C19orf47 MAP3K10 chr19 40209219 + C19orf47 chr19 40341890 - Exonic hg38 LUSC TCGA-85-A510-01A 72 217 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 95956 ChimerSeq TCGA FAWG TCGA_RNA-Seq C19orf47-MAP3K10 C19orf47 chr19 40322028 - MAP3K10 chr19 40205911 + Exonic hg38 LUSC TCGA-85-A510-01A 1 5 In-Frame Intra-chr q13.2 q13.2 95957 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM87B-MERTK TMEM87B chr2 112055756 + MERTK chr2 111994251 + Exonic hg38 LUSC TCGA-85-A511-01A 7 26 In-Frame Intra-chr q13 q13 Seq+ 95958 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF121-PPP6R3 RNF121 chr11 71929124 + PPP6R3 chr11 68567014 + Exonic hg38 LUSC TCGA-85-A511-01A 3 8 In-Frame Intra-chr q13.4 q13.2 Seq+ 95959 ChimerSeq TCGA FAWG TCGA_RNA-Seq MON2-RCC1L MON2 chr12 62501698 + RCC1L chr7 75057616 - Exonic hg38 LUSC TCGA-85-A513-01A 15 71 In-Frame Inter-chr q14.1 q11.23 95960 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGC27382-DAB1 MGC27382 chr1 78229729 + DAB1 chr1 57145429 - Exonic hg38 LUSC TCGA-85-A513-01A 3 23 5'UTR-CDS Intra-chr p31.1 p32.1 95961 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK3-EIF5 MARK3 chr14 103405267 + EIF5 chr14 103335653 + Exonic hg38 LUSC TCGA-85-A53L-01A 10 70 CDS-5'UTR Intra-chr q32.32 CAMK:CAMKL q32.32 Seq+ 95962 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELL-LDLRAD1 ELL chr19 18461578 - LDLRAD1 chr1 54010410 - Exonic hg38 LUSC TCGA-85-A53L-01A 4 42 In-Frame Inter-chr p13.11 p32.3 Seq+ 95963 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM6-IDH2 RBM6 chr3 49940225 + IDH2 chr15 90091644 - Exonic hg38 LUSC TCGA-85-A53L-01A 6 21 5'UTR-5'UTR Inter-chr p21.31 Tumor suppressor gene q26.1 Oncogene Seq+ 95964 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPHN-DCAF5 GPHN chr14 66681185 + DCAF5 chr14 69091887 - Exonic hg38 LUSC TCGA-85-A53L-01A 4 9 In-Frame Intra-chr q23.3 q24.1 Seq+ 95965 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUX1-SH2B2 CUX1 chr7 102195603 + SH2B2 chr7 102314336 + Exonic hg38 LUSC TCGA-85-A53L-01A 2 14 Out-of-frame Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 Seq+ 95966 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCA4-CARM1 SMARCA4 chr19 11013112 + CARM1 chr19 10904951 + Exonic hg38 LUSC TCGA-85-A53L-01A 1 14 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 95967 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMTOR4-AP4M1 LAMTOR4 chr7 100149565 + AP4M1 chr7 100110191 + Exonic hg38 LUSC TCGA-85-A53L-01A 1 11 5'UTR-3'UTR Intra-chr q22.1 q22.1 Seq+ 95968 ChimerSeq TCGA FAWG TCGA_RNA-Seq LETM2-ERCC2 LETM2 chr8 38404506 + ERCC2 chr19 45369147 - Exonic hg38 LUSC TCGA-85-A53L-01A 1 2 In-Frame Inter-chr p11.23 q13.32 Oncogene Seq+ 95969 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR45B-B3GNTL1 WDR45B chr17 82643949 - B3GNTL1 chr17 82946983 - Exonic hg38 LUSC TCGA-90-6837-01A 57 466 CDS-3'UTR Intra-chr q25.3 Seq+ 95970 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRD9-CEP72 BRD9 chr5 891154 - CEP72 chr5 647806 + Exonic hg38 LUSC TCGA-90-6837-01A 6 52 Out-of-frame Intra-chr p15.33 Seq+ 95971 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF13B-ADAM3A KIF13B chr8 29245346 - ADAM3A chr8 39455504 - Exonic hg38 LUSC TCGA-90-7766-01A 7 24 CDS-3'UTR Intra-chr p12 p11.22 Seq+ 95972 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP5A1-PIEZO2 ATP5A1 chr18 46097836 - PIEZO2 chr18 10803994 - Exonic hg38 LUSC TCGA-90-7766-01A 1 3 Out-of-frame Intra-chr q21.1 p11.21 95973 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCAPH-KCNIP3 NCAPH chr2 96335848 + KCNIP3 chr2 95374296 + Exonic hg38 LUSC TCGA-90-7767-01A 10 9 In-Frame Intra-chr q11.2 q11.1 Transcription factor Seq+ 95974 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCA13-BLVRA ABCA13 chr7 48171552 + BLVRA chr7 43803676 + Exonic hg38 LUSC TCGA-90-7769-01A 8 18 Out-of-frame Intra-chr p12.3 p13 Seq+ 95975 ChimerSeq TCGA FAWG TCGA_RNA-Seq AK1-ST6GALNAC4 AK1 chr9 127871823 - ST6GALNAC4 chr9 127912338 - Exonic hg38 LUSC TCGA-90-7769-01A 6 10 In-Frame Intra-chr q34.11 q34.11 Seq+ 95976 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASXL2-MINPP1 ASXL2 chr2 25845481 - MINPP1 chr10 87513124 + Exonic hg38 LUSC TCGA-90-7769-01A 1 15 Out-of-frame Inter-chr p23.3 q23.2 Seq+ 95977 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSMCE1-PEX11G NSMCE1 chr16 27268706 - PEX11G chr19 7482211 - Exonic hg38 LUSC TCGA-90-7964-01A 2 5 5'UTR-CDS Inter-chr p12.1 p13.2 Seq+ 95978 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAF7-LRRC1 TRAF7 chr16 2165936 + LRRC1 chr6 53878993 + Exonic hg38 LUSC TCGA-90-A4ED-01A 1 1 In-Frame Inter-chr p13.3 Oncogene p12.1 Seq+ 95979 ChimerSeq TCGA FAWG TCGA_RNA-Seq RABGAP1-TTLL11 RABGAP1 chr9 123020459 + TTLL11 chr9 122039368 - Exonic hg38 LUSC TCGA-90-A59Q-01A 6 27 In-Frame Intra-chr q33.2 q33.2 Seq+ 95980 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP93-MT1H NUP93 chr16 56730211 + MT1H chr16 56670506 + Exonic hg38 LUSC TCGA-92-7340-01A 2 9 5'UTR-CDS Intra-chr q13 q13 95981 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHCG-ANXA2 RHCG chr15 89496361 - ANXA2 chr15 60364523 - Exonic hg38 LUSC TCGA-92-7340-01A 1 1 In-Frame Intra-chr q26.1 q22.2 95982 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCBLD2-ABI3BP DCBLD2 chr3 98901122 - ABI3BP chr3 100780209 - Exonic hg38 LUSC TCGA-92-7341-01A 13 26 In-Frame Intra-chr q12.1 q12.2 Seq+ 95983 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1958-HSDL2 KIAA1958 chr9 112487118 + HSDL2 chr9 112459449 + Exonic hg38 LUSC TCGA-92-7341-01A 5 29 5'UTR-5'UTR Intra-chr q32 q32 95984 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMTK2-BRI3 LMTK2 chr7 98159425 + BRI3 chr7 98282351 + Exonic hg38 LUSC TCGA-92-7341-01A 4 22 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 95985 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRL3-BBS9 ADGRL3 chr4 61497348 + BBS9 chr7 33604865 + Exonic hg38 LUSC TCGA-92-7341-01A 2 12 In-Frame Inter-chr q13.1 Oncogene p14.3 95986 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDH3B2-PLA2G16 ALDH3B2 chr11 67666906 - PLA2G16 chr11 63590368 - Exonic hg38 LUSC TCGA-92-7341-01A 1 10 Out-of-frame Intra-chr q13.2 q13.1 Tumor suppressor gene Seq+ 95987 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC62-ATG3 SEC62 chr3 169985865 + ATG3 chr3 112553329 - Exonic hg38 LUSC TCGA-92-7341-01A 2 5 Out-of-frame Intra-chr q26.2 q13.2 95988 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLG1-PAK2 DLG1 chr3 197282679 - PAK2 chr3 196782626 + Exonic hg38 LUSC TCGA-92-7341-01A 1 2 CDS-5'UTR Intra-chr q29 Tumor suppressor gene q29 STE:STE20 Seq+ 95989 ChimerSeq TCGA FAWG TCGA_RNA-Seq THBS4-SCFD2 THBS4 chr5 79991412 + SCFD2 chr4 53145582 - Exonic hg38 LUSC TCGA-92-7341-01A 1 2 5'UTR-CDS Inter-chr q14.1 q12 95990 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-AGTR1 NF1 chr17 31335031 + AGTR1 chr3 148707944 + Exonic hg38 LUSC TCGA-92-8063-01A 6 9 CDS-5'UTR Inter-chr q11.2 Oncogene Tumor suppressor gene q24 Tumor suppressor gene Seq+ 95991 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARL5B-NSUN6 ARL5B chr10 18668677 + NSUN6 chr10 18551971 - Exonic hg38 LUSC TCGA-92-8064-01A 3 26 Out-of-frame Intra-chr p12.31 p12.31 Seq+ 95992 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSTA-CASR CSTA chr3 122337648 + CASR chr3 122275812 + Exonic hg38 LUSC TCGA-92-8065-01A 46 183 In-Frame Intra-chr q21.1 q13.33 Seq+ 95993 ChimerSeq TCGA FAWG TCGA_RNA-Seq LTBP3-TSPAN32 LTBP3 chr11 65538959 - TSPAN32 chr11 2317399 + Exonic hg38 LUSC TCGA-92-8065-01A 22 70 Out-of-frame Intra-chr q13.1 p15.5 Tumor suppressor gene Seq+ 95994 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGLYRP4-S100A2 PGLYRP4 chr1 153337181 - S100A2 chr1 153563887 - Exonic hg38 LUSC TCGA-92-8065-01A 12 85 CDS-5'UTR Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 95995 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806934 + TACC3 chr4 1739702 + Exonic hg38 LUSC TCGA-92-8065-01A 10 44 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 95996 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC1A3-MAPKAP1 SLC1A3 chr5 36608604 + MAPKAP1 chr9 125657799 - Exonic hg38 LUSC TCGA-92-8065-01A 3 6 In-Frame Inter-chr p13.2 q33.3 Seq+ 95997 ChimerSeq TCGA FAWG TCGA_RNA-Seq S100A7A-S100A9 S100A7A chr1 153418223 + S100A9 chr1 153360644 + Exonic hg38 LUSC TCGA-92-8065-01A 1 9 In-Frame Intra-chr q21.3 q21.3 95998 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRPK1-CEP57L1 SRPK1 chr6 35842535 - CEP57L1 chr6 109160572 + Exonic hg38 LUSC TCGA-94-7033-01A 30 78 Out-of-frame Intra-chr p21.31 CMGC:SRPK q21 Seq+ 95999 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTTN-DSG1 CTTN chr11 70422995 + DSG1 chr18 31326581 + Exonic hg38 LUSC TCGA-94-7033-01A 14 61 In-Frame Inter-chr q13.3 q12.1 Seq+ 96000 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIK2-CARD17 SIK2 chr11 111620402 + CARD17 chr11 105099421 - Exonic hg38 LUSC TCGA-94-7557-01A 30 76 In-Frame Intra-chr q23.1 q22.3 Seq+ 96001 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWP2-TANGO6 WWP2 chr16 69888249 + TANGO6 chr16 68902328 + Exonic hg38 LUSC TCGA-94-7557-01A 11 53 In-Frame Intra-chr q22.1 q22.1 Seq+ 96002 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK2-BUB1B MARK2 chr11 63839560 + BUB1B chr15 40176477 + Exonic hg38 LUSC TCGA-94-7557-01A 8 21 In-Frame Inter-chr q13.1 CAMK:CAMKL q15.1 Oncogene Seq+ 96003 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFAT5-CDH3 NFAT5 chr16 69670288 + CDH3 chr16 68698191 + Exonic hg38 LUSC TCGA-94-7557-01A 6 27 In-Frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 96004 ChimerSeq TCGA FAWG TCGA_RNA-Seq STIP1-PAK1 STIP1 chr11 64186270 + PAK1 chr11 77332867 - Exonic hg38 LUSC TCGA-94-7557-01A 4 5 In-Frame Intra-chr q13.1 q14.1 STE:STE20 Seq+ 96005 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC186-EMX2OS CCDC186 chr10 114157554 - EMX2OS chr10 117492109 - Exonic hg38 LUSC TCGA-94-7557-01A 2 10 3'UTR-3'UTR Intra-chr q25.3 q26.11 96006 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2H5-SNX9 GTF2H5 chr6 158170538 + SNX9 chr6 157766385 + Exonic hg38 LUSC TCGA-94-7557-01A 2 4 CDS-5'UTR Intra-chr q25.3 q25.3 96007 ChimerSeq TCGA FAWG TCGA_RNA-Seq C11orf84-BUB1B C11orf84 chr11 63813813 + BUB1B chr15 40176477 + Exonic hg38 LUSC TCGA-94-7557-01A 1 3 Out-of-frame Inter-chr q13.1 q15.1 Oncogene Seq+ 96008 ChimerSeq TCGA FAWG TCGA_RNA-Seq OPA1-PPP2R3A OPA1 chr3 193667280 + PPP2R3A chr3 136145043 + Exonic hg38 LUSC TCGA-94-7943-01A 13 21 Out-of-frame Intra-chr q29 q22.2 Seq+ 96009 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERICH1-IYD ERICH1 chr8 668598 - IYD chr6 150389352 + Exonic hg38 LUSC TCGA-94-7943-01A 10 18 In-Frame Inter-chr q25.1 Seq+ 96010 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHBP1L1-FRMD8 EHBP1L1 chr11 65585591 + FRMD8 chr11 65411242 + Exonic hg38 LUSC TCGA-94-7943-01A 6 4 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 96011 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID2-SPSB2 ARID2 chr12 45811551 + SPSB2 chr12 6882287 - Exonic hg38 LUSC TCGA-94-7943-01A 3 6 CDS-5'UTR Intra-chr q12 Oncogene Tumor suppressor gene Transcription factor p13.31 Seq+ 96012 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSR-OTOA GSR chr8 30692969 - OTOA chr16 21760470 + Exonic hg38 LUSC TCGA-94-7943-01A 3 4 CDS-3'UTR Inter-chr p12 p12.2 Seq+ 96013 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLPB-FCHSD2 CLPB chr11 72294620 - FCHSD2 chr11 72902638 - Exonic hg38 LUSC TCGA-94-7943-01A 1 11 In-Frame Intra-chr q13.4 q13.4 Seq+ 96014 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF653-CNN1 ZNF653 chr19 11505488 - CNN1 chr19 11541076 + Exonic hg38 LUSC TCGA-94-7943-01A 1 8 Out-of-frame Intra-chr p13.2 Transcription factor p13.2 Tumor suppressor gene Seq+ 96015 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGPS2-RASAL2 RALGPS2 chr1 178725419 + RASAL2 chr1 178420511 + Exonic hg38 LUSC TCGA-94-7943-01A 1 5 5'UTR-CDS Intra-chr q25.2 q25.2 Tumor suppressor gene Seq+ 96016 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPR-E2F2 HNRNPR chr1 23333518 - E2F2 chr1 23524488 - Exonic hg38 LUSC TCGA-94-8035-01A 6 14 5'UTR-5'UTR Intra-chr Tumor suppressor gene Transcription factor Seq+ 96017 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPP-SEC62 LPP chr3 188609844 + SEC62 chr3 169975608 + Exonic hg38 LUSC TCGA-94-8035-01A 1 5 In-Frame Intra-chr q27.3 Oncogene q26.2 96018 ChimerSeq TCGA FAWG TCGA_RNA-Seq IRF6-SRGAP2 IRF6 chr1 209805947 - SRGAP2 chr1 206436965 + Exonic hg38 LUSC TCGA-94-8490-01A 3 13 5'UTR-CDS Intra-chr q32.2 Transcription factor q32.1 Tumor suppressor gene Seq+ 96019 ChimerSeq TCGA FAWG TCGA_RNA-Seq GCSH-PKD1L2 GCSH chr16 81096131 - PKD1L2 chr16 81123784 - Exonic hg38 LUSC TCGA-94-8490-01A 1 8 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 96020 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1191-NOP16 KIAA1191 chr5 176350613 - NOP16 chr5 176384374 - Exonic hg38 LUSC TCGA-94-8491-01A 32 118 In-Frame Intra-chr q35.2 q35.2 Seq+ 96021 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM157B-CCDC155 FAM157B chr9 138231103 + CCDC155 chr19 49394476 + Exonic hg38 LUSC TCGA-94-8491-01A 10 36 5'UTR-CDS Inter-chr q34.3 q13.33 Seq+ 96022 ChimerSeq TCGA FAWG TCGA_RNA-Seq STIP1-MS4A18 STIP1 chr11 64197974 + MS4A18 chr11 60729304 + Exonic hg38 LUSC TCGA-94-8491-01A 8 34 CDS-5'UTR Intra-chr q13.1 Seq+ 96023 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAXIP1-NCAPG2 PAXIP1 chr7 154998650 - NCAPG2 chr7 158631717 - Exonic hg38 LUSC TCGA-94-8491-01A 7 26 Out-of-frame Intra-chr q36.2 q36.3 Seq+ 96024 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1C-SMG6 MYO1C chr17 1474610 - SMG6 chr17 2085901 - Exonic hg38 LUSC TCGA-94-8491-01A 6 14 In-Frame Intra-chr p13.3 p13.3 Seq+ 96025 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP42-SBF2 ARHGAP42 chr11 100687832 + SBF2 chr11 9790683 - Exonic hg38 LUSC TCGA-94-8491-01A 2 9 In-Frame Intra-chr q22.1 p15.4 Seq+ 96026 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2orf42-FAM136A C2orf42 chr2 70248405 - FAM136A chr2 70301603 - Exonic hg38 LUSC TCGA-94-8491-01A 1 13 5'UTR-5'UTR Intra-chr p13.3 p13.3 96027 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN23-STAT4 PTPN23 chr3 47381180 + STAT4 chr2 191076325 - Exonic hg38 LUSC TCGA-94-8491-01A 1 13 In-Frame Inter-chr p21.31 Tumor suppressor gene q32.3 Transcription factor 96028 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL28-GSE1 RPL28 chr19 55386438 + GSE1 chr16 85357463 + Exonic hg38 LUSC TCGA-94-8491-01A 3 4 CDS-5'UTR Inter-chr q13.42 q24.1 96029 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEK7-RAB3GAP2 NEK7 chr1 198157276 + RAB3GAP2 chr1 220213979 - Exonic hg38 LUSC TCGA-94-8491-01A 2 7 5'UTR-CDS Intra-chr q31.3 Other:NEK q41 Seq+ 96030 ChimerSeq TCGA FAWG TCGA_RNA-Seq PANK4-RGS6 PANK4 chr1 2511338 - RGS6 chr14 72352095 + Exonic hg38 LUSC TCGA-94-8491-01A 1 7 5'UTR-5'UTR Inter-chr p36.32 q24.2 Seq+ 96031 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3GAP2-NEK7 RAB3GAP2 chr1 220232799 - NEK7 chr1 198232553 + Exonic hg38 LUSC TCGA-94-8491-01A 1 5 CDS-5'UTR Intra-chr q41 q31.3 Other:NEK Seq+ 96032 ChimerSeq TCGA FAWG TCGA_RNA-Seq N4BP1-DDX19B N4BP1 chr16 48609775 - DDX19B chr16 70324585 + Exonic hg38 LUSC TCGA-94-A4VJ-01A 25 110 Out-of-frame Intra-chr q12.1 q22.1 Seq+ 96033 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-CTTN ERBB2 chr17 39715939 + CTTN chr11 70422940 + Exonic hg38 LUSC TCGA-94-A4VJ-01A 4 22 In-Frame Inter-chr q12 Oncogene q13.3 Seq+ 96034 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF562-RFX2 ZNF562 chr19 9659379 - RFX2 chr19 6047504 - Exonic hg38 LUSC TCGA-94-A4VJ-01A 2 10 CDS-5'UTR Intra-chr p13.2 Transcription factor p13.3 Transcription factor Seq+ 96035 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A16-NDUFA9 SLC25A16 chr10 68487144 - NDUFA9 chr12 4682205 + Exonic hg38 LUSC TCGA-94-A4VJ-01A 2 9 In-Frame Inter-chr q21.3 p13.32 Seq+ 96036 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPT1A-LPXN CPT1A chr11 68799218 - LPXN chr11 58570713 - Exonic hg38 LUSC TCGA-94-A5I6-01A 2 9 Out-of-frame Intra-chr q13.3 q12.1 Seq+ 96037 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNBP4-NECTIN1 FNBP4 chr11 47765270 - NECTIN1 chr11 119677857 - Exonic hg38 LUSC TCGA-96-7544-01A 48 128 5'UTR-CDS Intra-chr p11.2 q23.3 96038 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIC1-EPYC RIC1 chr9 5690038 + EPYC chr12 90978262 - Exonic hg38 LUSC TCGA-96-7544-01A 14 50 Out-of-frame Inter-chr p24.1 q21.33 96039 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC127-SDHA CCDC127 chr5 218093 - SDHA chr5 223482 + Exonic hg38 LUSC TCGA-96-7544-01A 5 13 5'UTR-CDS Intra-chr p15.33 p15.33 Oncogene Tumor suppressor gene Seq+ 96040 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R5D-GLTSCR1L PPP2R5D chr6 42989688 + GLTSCR1L chr6 42852092 + Exonic hg38 LUSC TCGA-96-7544-01A 2 9 Out-of-frame Intra-chr p21.1 Seq+ 96041 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRC2C-FMO1 PRRC2C chr1 171485735 + FMO1 chr1 171267543 + Exonic hg38 LUSC TCGA-96-8169-01A 26 88 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 96042 ChimerSeq TCGA FAWG TCGA_RNA-Seq NADSYN1-MYEOV NADSYN1 chr11 71464142 + MYEOV chr11 69341510 + Exonic hg38 LUSC TCGA-96-8169-01A 6 52 CDS-3'UTR Intra-chr q13.4 q13.3 Seq+ 96043 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC85C-IGHA1 CCDC85C chr14 99509323 - IGHA1 chr14 105708665 - Exonic hg38 LUSC TCGA-96-8170-01A 24 0 Out-of-frame Intra-chr q32.2 96044 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D9B-RNF130 TBC1D9B chr5 179904702 - RNF130 chr5 179920426 - Exonic hg38 LUSC TCGA-96-A4JK-01A 33 143 5'UTR-3'UTR Intra-chr q35.3 Seq+ 96045 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3PXD2A-PDLIM1 SH3PXD2A chr10 103801282 - PDLIM1 chr10 95271784 - Exonic hg38 LUSC TCGA-96-A4JK-01A 22 72 In-Frame Intra-chr q24.33 q23.33 Seq+ 96046 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPYSL2-BNIP3L DPYSL2 chr8 26583983 + BNIP3L chr8 26505307 + Exonic hg38 LUSC TCGA-96-A4JK-01A 4 14 CDS-3'UTR Intra-chr p21.2 p21.2 Tumor suppressor gene Seq+ 96047 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTN4R-DNAH2 RTN4R chr22 20268071 - DNAH2 chr17 7816571 + Exonic hg38 LUSC TCGA-96-A4JK-01A 4 6 Out-of-frame Inter-chr q11.21 p13.1 Seq+ 96048 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACAP3-DVL1 ACAP3 chr1 1307769 - DVL1 chr1 1342758 - Exonic hg38 LUSC TCGA-96-A4JK-01A 3 7 In-Frame Intra-chr p36.33 p36.33 Seq+ 96049 ChimerSeq TCGA FAWG TCGA_RNA-Seq VARS-HSPA1L VARS chr6 31795546 - HSPA1L chr6 31811985 - Exonic hg38 LUSC TCGA-96-A4JK-01A 1 14 5'UTR-5'UTR Intra-chr Seq+ 96050 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPA-CORO2A XPA chr9 97687096 - CORO2A chr9 98157660 - Exonic hg38 LUSC TCGA-96-A4JK-01A 2 5 CDS-5'UTR Intra-chr q22.33 Oncogene Transcription factor q22.33 Seq+ 96051 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATR-XRN1 ATR chr3 142535080 - XRN1 chr3 142405076 - Exonic hg38 LUSC TCGA-96-A4JK-01A 1 7 In-Frame Intra-chr q23 Atypical:PIKK Oncogene Tumor suppressor gene q23 96052 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPG5-IGHJ1 EPG5 chr18 45851700 - IGHJ1 chr14 105865452 - Exonic hg38 LUSC TCGA-96-A4JL-01A 7 0 Out-of-frame Inter-chr q21.1 Seq+ 96053 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFHX3-WWP2 ZFHX3 chr16 73058530 - WWP2 chr16 69840126 + Exonic hg38 LUSC TCGA-96-A4JL-01A 1 13 5'UTR-5'UTR Intra-chr q22.3 Tumor suppressor gene Transcription factor q22.1 Seq+ 96054 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL16-RFLNB METTL16 chr17 2441490 - RFLNB chr17 443494 - Exonic hg38 LUSC TCGA-98-8020-01A 2 34 CDS-5'UTR Intra-chr p13.3 96055 ChimerSeq TCGA FAWG TCGA_RNA-Seq NARS2-ALG8 NARS2 chr11 78559539 - ALG8 chr11 78114392 - Exonic hg38 LUSC TCGA-98-8020-01A 2 15 In-Frame Intra-chr q14.1 q14.1 Seq+ 96056 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD3-MACF1 BTBD3 chr20 11890954 + MACF1 chr1 39250014 + Exonic hg38 LUSC TCGA-98-8021-01A 4 21 Out-of-frame Inter-chr p12.2 p34.3 Seq+ 96057 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC24A3-MACROD2 SLC24A3 chr20 19585544 + MACROD2 chr20 15862745 + Exonic hg38 LUSC TCGA-98-8021-01A 2 6 In-Frame Intra-chr p11.23 p12.1 Seq+ 96058 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGF2BP2-ST6GAL1 IGF2BP2 chr3 185823153 - ST6GAL1 chr3 187072849 + Exonic hg38 LUSC TCGA-98-8021-01A 2 4 Out-of-frame Intra-chr q27.2 q27.3 Seq+ 96059 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNM2-KCTD3 PITPNM2 chr12 123034513 - KCTD3 chr1 215618886 + Exonic hg38 LUSC TCGA-98-8021-01A 1 3 Out-of-frame Inter-chr q24.31 q41 Seq+ 96060 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4A-PTCH2 KDM4A chr1 43671875 + PTCH2 chr1 44820704 - Exonic hg38 LUSC TCGA-98-8022-01A 6 21 Out-of-frame Intra-chr p34.2 p34.1 Tumor suppressor gene Seq+ 96061 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZYG11B-FGGY ZYG11B chr1 52816629 + FGGY chr1 59767190 + Exonic hg38 LUSC TCGA-98-8022-01A 2 14 CDS-3'UTR Intra-chr p32.3 p32.1 Seq+ 96062 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZHX2-LELP1 ZHX2 chr8 122781946 + LELP1 chr1 153204687 + Exonic hg38 LUSC TCGA-98-8023-01A 5 74 5'UTR-5'UTR Inter-chr q24.13 Tumor suppressor gene Transcription factor q21.3 Seq+ 96063 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFTPH-GLYATL3 AFTPH chr2 64569679 + GLYATL3 chr6 49511952 + Exonic hg38 LUSC TCGA-98-8023-01A 10 43 CDS-5'UTR Inter-chr p14 p12.3 Seq+ 96064 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L1-CNBD2 EPB41L1 chr20 36212376 + CNBD2 chr20 35995038 + Exonic hg38 LUSC TCGA-98-A538-01A 11 114 In-Frame Intra-chr q11.23 q11.23 Seq+ 96065 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1429-FAM49B KIAA1429 chr8 94499374 - FAM49B chr8 129970995 - Exonic hg38 LUSC TCGA-98-A539-01A 1 3 Out-of-frame Intra-chr q22.1 q24.21 Seq+ 96066 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN10-WNT7B ATXN10 chr22 45740538 + WNT7B chr22 45950146 - Exonic hg38 LUSC TCGA-98-A539-01A 1 1 Out-of-frame Intra-chr q13.31 q13.31 96067 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM104A-CDC42EP4 FAM104A chr17 73227165 - CDC42EP4 chr17 73286612 - Exonic hg38 LUSC TCGA-98-A53A-01A 7 81 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 96068 ChimerSeq TCGA FAWG TCGA_RNA-Seq LUC7L-AXIN1 LUC7L chr16 227242 - AXIN1 chr16 314683 - Exonic hg38 LUSC TCGA-98-A53A-01A 12 55 Out-of-frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Seq+ 96069 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM104-PCYT2 TMEM104 chr17 74785603 + PCYT2 chr17 81909602 - Exonic hg38 LUSC TCGA-98-A53A-01A 10 59 In-Frame Intra-chr q25.1 q25.3 Seq+ 96070 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF12-TPRG1 TAF12 chr1 28617953 - TPRG1 chr3 189310386 + Exonic hg38 LUSC TCGA-98-A53A-01A 12 35 Out-of-frame Inter-chr p35.3 q28 Seq+ 96071 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAPG-PIEZO2 NAPG chr18 10534496 + PIEZO2 chr18 10682292 - Exonic hg38 LUSC TCGA-98-A53A-01A 7 25 In-Frame Intra-chr p11.22 p11.21 Seq+ 96072 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPPL2A-TNFAIP8L3 SPPL2A chr15 50736101 - TNFAIP8L3 chr15 51058443 - Exonic hg38 LUSC TCGA-98-A53A-01A 3 25 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 96073 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXNRD1-LAMTOR3 TXNRD1 chr12 104313317 + LAMTOR3 chr4 99882067 - Exonic hg38 LUSC TCGA-98-A53A-01A 3 23 In-Frame Inter-chr q23.3 q23 Seq+ 96074 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP37-DIRC3 USP37 chr2 218529956 - DIRC3 chr2 217434116 - Exonic hg38 LUSC TCGA-98-A53A-01A 3 17 CDS-3'UTR Intra-chr q35 q35 Seq+ 96075 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMK2D-ANK2 CAMK2D chr4 113509638 - ANK2 chr4 113381457 + Exonic hg38 LUSC TCGA-98-A53A-01A 4 9 In-Frame Intra-chr q26 q25 Seq+ 96076 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFE2L2-GPR37L1 NFE2L2 chr2 177264532 - GPR37L1 chr1 202127741 + Exonic hg38 LUSC TCGA-98-A53A-01A 1 4 In-Frame Inter-chr q31.2 Oncogene Transcription factor q32.1 96077 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG5-EPHA7 ATG5 chr6 106308364 - EPHA7 chr6 93272422 - Exonic hg38 LUSC TCGA-98-A53B-01A 21 97 Out-of-frame Intra-chr q21 q16.1 Oncogene Seq+ 96078 ChimerSeq TCGA FAWG TCGA_RNA-Seq PREP-POPDC3 PREP chr6 105397853 - POPDC3 chr6 105162160 - Exonic hg38 LUSC TCGA-98-A53B-01A 9 34 CDS-5'UTR Intra-chr q21 q21 Seq+ 96079 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL1RAP-COL6A5 IL1RAP chr3 190564353 + COL6A5 chr3 130373611 + Exonic hg38 LUSC TCGA-98-A53B-01A 4 22 5'UTR-5'UTR Intra-chr q28 q22.1 Seq+ 96080 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT6A-SMIM19 KAT6A chr8 42048378 - SMIM19 chr8 42548656 + Exonic hg38 LUSC TCGA-98-A53B-01A 4 16 Out-of-frame Intra-chr p11.21 Oncogene p11.21 Seq+ 96081 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG7-RSPH3 ATG7 chr3 11299416 + RSPH3 chr6 158982688 - Exonic hg38 LUSC TCGA-98-A53B-01A 2 9 Out-of-frame Inter-chr p25.3 q25.3 Seq+ 96082 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC3A1-CAMKMT SLC3A1 chr2 44286157 + CAMKMT chr2 44390241 + Exonic hg38 LUSC TCGA-98-A53B-01A 1 6 Out-of-frame Intra-chr p21 p21 96083 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMCO3-SPACA7 TMCO3 chr13 113510424 + SPACA7 chr13 112393021 + Exonic hg38 LUSC TCGA-98-A53C-01A 3 38 CDS-3'UTR Intra-chr q34 Seq+ 96084 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJB6-AGT DNAJB6 chr7 157385611 + AGT chr1 230706200 - Exonic hg38 LUSC TCGA-98-A53H-01A 4 14 In-Frame Inter-chr q36.3 q42.2 Seq+ 96085 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKACA-ASF1B PRKACA chr19 14093136 - ASF1B chr19 14126238 - Exonic hg38 LUSC TCGA-98-A53I-01A 4 20 Out-of-frame Intra-chr p13.12 p13.12 Seq+ 96086 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETMAR-EYS SETMAR chr3 4303526 + EYS chr6 65405367 - Exonic hg38 LUSC TCGA-98-A53I-01A 1 5 Out-of-frame Inter-chr p26.1 q12 Seq+ 96087 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP192-AFG3L2 CEP192 chr18 13001582 + AFG3L2 chr18 12329783 - Exonic hg38 LUSC TCGA-J1-A4AH-01A 4 29 Out-of-frame Intra-chr p11.21 p11.21 Seq+ 96088 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCKAP5-ARHGEF4 NCKAP5 chr2 133517458 - ARHGEF4 chr2 131027945 + Exonic hg38 LUSC TCGA-J1-A4AH-01A 1 6 Out-of-frame Intra-chr q21.2 q21.1 96089 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM38-FRMD4B RBM38 chr20 57393333 + FRMD4B chr3 69218379 - Exonic hg38 LUSC TCGA-L3-A524-01A 139 853 In-Frame Inter-chr q13.31 Tumor suppressor gene p14.1 Seq+ 96090 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXNC1-CRADD PLXNC1 chr12 94265225 + CRADD chr12 93849970 + Exonic hg38 LUSC TCGA-L3-A524-01A 18 67 Out-of-frame Intra-chr q22 Tumor suppressor gene q22 Seq+ 96091 ChimerSeq TCGA FAWG TCGA_RNA-Seq F11R-PFDN2 F11R chr1 160998827 - PFDN2 chr1 161102375 - Exonic hg38 LUSC TCGA-L3-A524-01A 5 113 3'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 96092 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNB-TANGO2 PITPNB chr22 27858387 - TANGO2 chr22 20036760 + Exonic hg38 LUSC TCGA-L3-A524-01A 21 42 CDS-5'UTR Intra-chr q12.1 q11.21 Seq+ 96093 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2K-LIAS UBE2K chr4 39737511 + LIAS chr4 39470017 + Exonic hg38 LUSC TCGA-L3-A524-01A 10 54 Out-of-frame Intra-chr p14 p14 Seq+ 96094 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM25-CD3G TMEM25 chr11 118534129 + CD3G chr11 118349743 + Exonic hg38 LUSC TCGA-L3-A524-01A 10 50 In-Frame Intra-chr q23.3 q23.3 Seq+ 96095 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS8-MED21 EPS8 chr12 15789161 - MED21 chr12 27046154 + Exonic hg38 LUSC TCGA-L3-A524-01A 9 51 5'UTR-3'UTR Intra-chr p12.3 p11.23 Seq+ 96096 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHRS4L2-OVAAL DHRS4L2 chr14 23989075 + OVAAL chr1 180566178 + Exonic hg38 LUSC TCGA-L3-A524-01A 7 49 3'UTR-5'UTR Inter-chr q11.2 q25.3 96097 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSI2-SYNPO2 MSI2 chr17 57401471 + SYNPO2 chr4 119023430 + Exonic hg38 LUSC TCGA-L3-A524-01A 5 23 In-Frame Inter-chr q22 q26 Tumor suppressor gene Seq+ 96098 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM6-FAM212A RBM6 chr3 49940225 + FAM212A chr3 49804181 + Exonic hg38 LUSC TCGA-L3-A524-01A 5 10 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 96099 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB25-TPRG1 ZBTB25 chr14 64503661 - TPRG1 chr3 189238733 + Exonic hg38 LUSC TCGA-L3-A524-01A 2 21 5'UTR-CDS Inter-chr q23.3 Transcription factor q28 Seq+ 96100 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASC3-ERBB2 CASC3 chr17 40141607 + ERBB2 chr17 39688696 + Exonic hg38 LUSC TCGA-L3-A524-01A 4 12 CDS-5'UTR Intra-chr q21.1 q12 Oncogene Seq+ 96101 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGPS1-LMX1B RALGPS1 chr9 126965951 + LMX1B chr9 126690836 + Exonic hg38 LUSC TCGA-L3-A524-01A 2 9 Out-of-frame Intra-chr q33.3 q33.3 Transcription factor Seq+ 96102 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3CA-YLPM1 PIK3CA chr3 179148603 + YLPM1 chr14 74835265 + Exonic hg38 LUSC TCGA-L3-A524-01A 3 1 5'UTR-CDS Inter-chr q26.32 Oncogene q24.3 96103 ChimerSeq TCGA FAWG TCGA_RNA-Seq F11R-SPTA1 F11R chr1 161021010 - SPTA1 chr1 158661409 - Exonic hg38 LUSC TCGA-L3-A524-01A 1 8 In-Frame Intra-chr q23.3 q23.1 96104 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUMB-IFI16 NUMB chr14 73297211 - IFI16 chr1 159045297 + Exonic hg38 LUSC TCGA-L3-A524-01A 1 5 In-Frame Inter-chr q24.3 Tumor suppressor gene q23.1 Tumor suppressor gene 96105 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABI2-MAIP1 ABI2 chr2 203367044 + MAIP1 chr2 199955497 + Exonic hg38 LUSC TCGA-L3-A524-01A 1 2 5'UTR-5'UTR Intra-chr q33.2 Tumor suppressor gene q33.1 96106 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADPGK-BBS4 ADPGK chr15 72760407 - BBS4 chr15 72722794 + Exonic hg38 LUSC TCGA-L3-A524-01A 1 2 Out-of-frame Intra-chr q24.1 q24.1 96107 ChimerSeq TCGA FAWG TCGA_RNA-Seq MFN1-KMT2C MFN1 chr3 179352035 + KMT2C chr7 152224179 - Exonic hg38 LUSC TCGA-L3-A524-01A 1 1 In-Frame Inter-chr q26.33 q36.1 Oncogene Tumor suppressor gene 96108 ChimerSeq TCGA FAWG TCGA_RNA-Seq HCFC1-EPHA5 HCFC1 chrX 153970648 - EPHA5 chr4 65324219 - Exonic hg38 LUSC TCGA-LA-A446-01A 2 6 Out-of-frame Inter-chr q28 q13.2 Oncogene Seq+ 96109 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPC6-ITGBL1 GPC6 chr13 93545421 + ITGBL1 chr13 101567699 + Exonic hg38 LUSC TCGA-LA-A446-01A 1 2 In-Frame Intra-chr q31.3 q33.1 96110 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM98C-BLVRB FAM98C chr19 38403694 + BLVRB chr19 40458545 - Exonic hg38 LUSC TCGA-LA-A7SW-01A 85 146 In-Frame Intra-chr q13.2 q13.2 Seq+ 96111 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLBP-LETM1 SLBP chr4 1711874 - LETM1 chr4 1815802 - Exonic hg38 LUSC TCGA-LA-A7SW-01A 19 61 In-Frame Intra-chr p16.3 p16.3 Seq+ 96112 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK1-CDH2 ROCK1 chr18 20991176 - CDH2 chr18 27952359 - Exonic hg38 LUSC TCGA-LA-A7SW-01A 18 61 Out-of-frame Intra-chr q11.1 AGC:DMPK q12.1 Oncogene Seq+ 96113 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCNX3-PACS1 PCNX3 chr11 65623644 + PACS1 chr11 66238804 + Exonic hg38 LUSC TCGA-LA-A7SW-01A 16 54 In-Frame Intra-chr q13.1 q13.1 96114 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP5L-UBE4A ATP5L chr11 118407097 + UBE4A chr11 118396314 + Exonic hg38 LUSC TCGA-LA-A7SW-01A 14 59 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 96115 ChimerSeq TCGA FAWG TCGA_RNA-Seq URM1-C9orf3 URM1 chr9 128371415 + C9orf3 chr9 95060694 + Exonic hg38 LUSC TCGA-LA-A7SW-01A 12 22 Out-of-frame Intra-chr q34.11 q22.32 Seq+ 96116 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD10-PTH BTBD10 chr11 13463092 - PTH chr11 13496173 - Exonic hg38 LUSC TCGA-LA-A7SW-01A 7 41 5'UTR-5'UTR Intra-chr p15.3 p15.3 Seq+ 96117 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2S2-ADRA1D EIF2S2 chr20 34090517 - ADRA1D chr20 4222130 - Exonic hg38 LUSC TCGA-LA-A7SW-01A 10 23 In-Frame Intra-chr q11.22 p13 Seq+ 96118 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTCF-E2F4 CTCF chr16 67571264 + E2F4 chr16 67194686 + Exonic hg38 LUSC TCGA-LA-A7SW-01A 6 19 5'UTR-CDS Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 Transcription factor Seq+ 96119 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIGA1-IFI44L MIGA1 chr1 77815231 + IFI44L chr1 78641021 + Exonic hg38 LUSC TCGA-LA-A7SW-01A 2 35 In-Frame Intra-chr p31.1 p31.1 96120 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSC2-MAPK8IP3 TSC2 chr16 2086871 + MAPK8IP3 chr16 1759958 + Exonic hg38 LUSC TCGA-LA-A7SW-01A 7 9 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 96121 ChimerSeq TCGA FAWG TCGA_RNA-Seq CERS5-LIMA1 CERS5 chr12 50167101 - LIMA1 chr12 50182037 - Exonic hg38 LUSC TCGA-LA-A7SW-01A 4 19 Out-of-frame Intra-chr q13.12 q13.12 Tumor suppressor gene Seq+ 96122 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4K5-ATP5S MAP4K5 chr14 50475077 - ATP5S chr14 50321483 + Exonic hg38 LUSC TCGA-LA-A7SW-01A 1 28 Out-of-frame Intra-chr q22.1 q21.3 Seq+ 96123 ChimerSeq TCGA FAWG TCGA_RNA-Seq MNAT1-AP5M1 MNAT1 chr14 60879835 + AP5M1 chr14 57274244 + Exonic hg38 LUSC TCGA-LA-A7SW-01A 4 13 In-Frame Intra-chr q23.1 q22.3 Seq+ 96124 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST6GALNAC3-AK5 ST6GALNAC3 chr1 76074884 + AK5 chr1 77483317 + Exonic hg38 LUSC TCGA-LA-A7SW-01A 3 10 In-Frame Intra-chr p31.1 p31.1 Seq+ 96125 ChimerSeq TCGA FAWG TCGA_RNA-Seq KPNA6-ZCCHC17 KPNA6 chr1 32108134 + ZCCHC17 chr1 31319109 + Exonic hg38 LUSC TCGA-LA-A7SW-01A 3 9 Out-of-frame Intra-chr p35.2 p35.2 Seq+ 96126 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALOX12P2-FBXO39 ALOX12P2 chr17 6899985 + FBXO39 chr17 6786780 + Exonic hg38 LUSC TCGA-LA-A7SW-01A 4 4 5'UTR-CDS Intra-chr p13.1 p13.1 Seq+ 96127 ChimerSeq TCGA FAWG TCGA_RNA-Seq LUC7L3-FLJ40194 LUC7L3 chr17 50746702 + FLJ40194 chr17 49252246 + Exonic hg38 LUSC TCGA-LA-A7SW-01A 3 7 CDS-5'UTR Intra-chr q21.33 q21.32 96128 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF21A-CKAP5 PHF21A chr11 45965315 - CKAP5 chr11 46783368 - Exonic hg38 LUSC TCGA-LA-A7SW-01A 2 8 In-Frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 96129 ChimerSeq TCGA FAWG TCGA_RNA-Seq YIF1A-CTSF YIF1A chr11 66287598 - CTSF chr11 66568082 - Exonic hg38 LUSC TCGA-LA-A7SW-01A 1 6 Out-of-frame Intra-chr q13.2 q13.2 96130 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF652-PHB ZNF652 chr17 49362413 - PHB chr17 49413291 - Exonic hg38 LUSC TCGA-LA-A7SW-01A 1 6 5'UTR-5'UTR Intra-chr q21.33 Transcription factor q21.33 Tumor suppressor gene Seq+ 96131 ChimerSeq TCGA FAWG TCGA_RNA-Seq ODF2-URM1 ODF2 chr9 128460554 + URM1 chr9 128371319 + Exonic hg38 LUSC TCGA-LA-A7SW-01A 1000 1000 5'UTR-5'UTR Intra-chr q34.11 q34.11 96132 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK3-EIF5 MARK3 chr14 103386080 + EIF5 chr14 103335653 + Exonic hg38 LUSC TCGA-LA-A7SW-01A 1000 1000 CDS-5'UTR Intra-chr q32.32 CAMK:CAMKL q32.32 Seq+ 96133 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARL13B-NSUN3 ARL13B chr3 94003908 + NSUN3 chr3 94126211 + Exonic hg38 LUSC TCGA-NC-A5HD-01A 1 8 In-Frame Intra-chr q11.1 q11.2 Seq+ 96134 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHEK2-C22orf31 CHEK2 chr22 28734403 - C22orf31 chr22 29060843 - Exonic hg38 LUSC TCGA-NC-A5HD-01A 1 5 Out-of-frame Intra-chr q12.1 Oncogene Tumor suppressor gene q12.1 Seq+ 96135 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR18-HN1L WDR18 chr19 985975 + HN1L chr16 1697834 + Exonic hg38 LUSC TCGA-NC-A5HE-01A 8 11 Out-of-frame Inter-chr p13.3 Seq+ 96136 ChimerSeq TCGA FAWG TCGA_RNA-Seq HN1L-WDR18 HN1L chr16 1699047 + WDR18 chr19 989762 + Exonic hg38 LUSC TCGA-NC-A5HE-01A 3 21 Out-of-frame Inter-chr p13.3 Seq+ 96137 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAB1-GULP1 NAB1 chr2 190673152 + GULP1 chr2 188584265 + Exonic hg38 LUSC TCGA-NC-A5HE-01A 2 5 In-Frame Intra-chr q32.2 q32.1 Seq+ 96138 ChimerSeq TCGA FAWG TCGA_RNA-Seq P4HB-L3MBTL4 P4HB chr17 81855142 - L3MBTL4 chr18 6093528 - Exonic hg38 LUSC TCGA-NC-A5HF-01A 7 74 Out-of-frame Inter-chr q25.3 p11.31 Tumor suppressor gene Transcription factor Seq+ 96139 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPAS1-CRIPT EPAS1 chr2 46297937 + CRIPT chr2 46618773 + Exonic hg38 LUSC TCGA-NC-A5HG-01A 5 7 Out-of-frame Intra-chr p21 Tumor suppressor gene Transcription factor p21 Seq+ 96140 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHNAK-NXF1 AHNAK chr11 62533661 - NXF1 chr11 62792701 - Exonic hg38 LUSC TCGA-NC-A5HH-01A 18 77 In-Frame Intra-chr q12.3 Tumor suppressor gene q12.3 Seq+ 96141 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED23-RNF217 MED23 chr6 131587709 - RNF217 chr6 125045211 + Exonic hg38 LUSC TCGA-NC-A5HH-01A 6 11 In-Frame Intra-chr q23.2 q22.31 Seq+ 96142 ChimerSeq TCGA FAWG TCGA_RNA-Seq FLNA-MTCP1 FLNA chrX 154367397 - MTCP1 chrX 155064033 - Exonic hg38 LUSC TCGA-NC-A5HH-01A 2 25 CDS-3'UTR Intra-chr q28 Tumor suppressor gene q28 Seq+ 96143 ChimerSeq TCGA FAWG TCGA_RNA-Seq FLNA-CMC4 FLNA chrX 154367397 - CMC4 chrX 155064033 - Exonic hg38 LUSC TCGA-NC-A5HH-01A 2 16 CDS-5'UTR Intra-chr q28 Tumor suppressor gene q28 Seq+ 96144 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPATA2L-FANCA SPATA2L chr16 89698195 - FANCA chr16 89745071 - Exonic hg38 LUSC TCGA-NC-A5HH-01A 2 13 Out-of-frame Intra-chr q24.3 q24.3 Oncogene Seq+ 96145 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC42BPB-ZFYVE1 CDC42BPB chr14 102986487 - ZFYVE1 chr14 72998315 - Exonic hg38 LUSC TCGA-NC-A5HI-01A 9 38 In-Frame Intra-chr q32.32 q24.2 Seq+ 96146 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA9-CTDSPL ITGA9 chr3 37629336 + CTDSPL chr3 37947057 + Exonic hg38 LUSC TCGA-NC-A5HI-01A 1 8 Out-of-frame Intra-chr p22.2 Oncogene p22.2 Tumor suppressor gene 96147 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCF1-FOXN3 FCF1 chr14 74713552 + FOXN3 chr14 89350808 - Exonic hg38 LUSC TCGA-NC-A5HI-01A 1 4 Out-of-frame Intra-chr q24.3 q32.11 Transcription factor Seq+ 96148 ChimerSeq TCGA FAWG TCGA_RNA-Seq C6orf132-TRERF1 C6orf132 chr6 42101852 - TRERF1 chr6 42232892 - Exonic hg38 LUSC TCGA-NC-A5HJ-01A 14 229 3'UTR-CDS Intra-chr p21.1 p21.1 Transcription factor Seq+ 96149 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPN13-GALNT14 CAPN13 chr2 30758046 - GALNT14 chr2 30924823 - Exonic hg38 LUSC TCGA-NC-A5HJ-01A 31 105 In-Frame Intra-chr p23.1 p23.1 Seq+ 96150 ChimerSeq TCGA FAWG TCGA_RNA-Seq WSB1-TRIM80P WSB1 chr17 27304911 + TRIM80P chr17 75074604 + Exonic hg38 LUSC TCGA-NC-A5HJ-01A 3 13 Out-of-frame Intra-chr q11.1 q25.1 96151 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC1A1-SMARCA2 SLC1A1 chr9 4490770 + SMARCA2 chr9 2096657 + Exonic hg38 LUSC TCGA-NC-A5HJ-01A 2 15 Out-of-frame Intra-chr p24.2 p24.3 Tumor suppressor gene Seq+ 96152 ChimerSeq TCGA FAWG TCGA_RNA-Seq FADS1-TMEM138 FADS1 chr11 61813243 - TMEM138 chr11 61367923 + Exonic hg38 LUSC TCGA-NC-A5HJ-01A 1 17 In-Frame Intra-chr q12.2 q12.2 96153 ChimerSeq TCGA FAWG TCGA_RNA-Seq GON4L-MEX3A GON4L chr1 155853276 - MEX3A chr1 156077682 - Exonic hg38 LUSC TCGA-NC-A5HJ-01A 2 10 In-Frame Intra-chr q22 q22 Seq+ 96154 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRF1-ADAD2 NRF1 chr7 129611824 + ADAD2 chr16 84194442 + Exonic hg38 LUSC TCGA-NC-A5HJ-01A 1 12 5'UTR-CDS Inter-chr q32.2 Tumor suppressor gene Transcription factor q24.1 96155 ChimerSeq TCGA FAWG TCGA_RNA-Seq YTHDF2-RAB42 YTHDF2 chr1 28743986 + RAB42 chr1 28593694 + Exonic hg38 LUSC TCGA-NC-A5HJ-01A 4 0 Out-of-frame Intra-chr p35.3 p35.3 Seq+ 96156 ChimerSeq TCGA FAWG TCGA_RNA-Seq C12orf65-SLC11A2 C12orf65 chr12 123233531 + SLC11A2 chr12 51010766 - Exonic hg38 LUSC TCGA-NC-A5HJ-01A 2 2 5'UTR-5'UTR Intra-chr q24.31 q13.12 Seq+ 96157 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF11-SETDB2 PHF11 chr13 49524216 + SETDB2 chr13 49480219 + Exonic hg38 LUSC TCGA-NC-A5HJ-01A 1 6 Out-of-frame Intra-chr q14.2 q14.2 Transcription factor Seq+ 96158 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLKL-TMEM231 MLKL chr16 74672268 - TMEM231 chr16 75539884 - Exonic hg38 LUSC TCGA-NC-A5HK-01A 7 47 Out-of-frame Intra-chr q23.1 TKL:TKL-Unique q23.1 Seq+ 96159 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLCF1-PPP1CA CLCF1 chr11 67373524 - PPP1CA chr11 67401199 - Exonic hg38 LUSC TCGA-NC-A5HK-01A 2 36 In-Frame Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 96160 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABHD16A-LY6G6F ABHD16A chr6 31700942 - LY6G6F chr6 31707458 + Exonic hg38 LUSC TCGA-NC-A5HK-01A 4 18 5'UTR-3'UTR Intra-chr p21.33 Seq+ 96161 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSD3-INTS10 PSD3 chr8 18936034 - INTS10 chr8 19819573 + Exonic hg38 LUSC TCGA-NC-A5HK-01A 1 12 Out-of-frame Intra-chr p22 p21.3 Seq+ 96162 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2CD5-CMAS C2CD5 chr12 22544061 - CMAS chr12 22055149 + Exonic hg38 LUSC TCGA-NC-A5HK-01A 1 2 Out-of-frame Intra-chr p12.1 p12.1 96163 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGUOK-STAMBP DGUOK chr2 73946906 + STAMBP chr2 73870143 + Exonic hg38 LUSC TCGA-NC-A5HL-01A 36 264 5'UTR-5'UTR Intra-chr p13.1 p13.1 Seq+ 96164 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPF2-CFL1 DPF2 chr11 65333918 + CFL1 chr11 65826609 - Exonic hg38 LUSC TCGA-NC-A5HL-01A 11 18 CDS-3'UTR Intra-chr q13.1 q13.1 Seq+ 96165 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNS1-MIR6513 TNS1 chr2 217907210 - MIR6513 chr2 218280126 - Exonic hg38 LUSC TCGA-NC-A5HL-01A 10 12 5'UTR-3'UTR Intra-chr q35 q35 96166 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC8D-TMEM9 LRRC8D chr1 89821291 + TMEM9 chr1 201146848 - Exonic hg38 LUSC TCGA-NC-A5HL-01A 5 21 5'UTR-CDS Intra-chr p22.2 q32.1 Seq+ 96167 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIL1-SMC1B SIL1 chr5 139196441 - SMC1B chr22 45383613 - Exonic hg38 LUSC TCGA-NC-A5HL-01A 3 7 5'UTR-CDS Inter-chr q31.2 q13.31 Seq+ 96168 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL4-STXBP5L METTL4 chr18 2544195 - STXBP5L chr3 121223003 + Exonic hg38 LUSC TCGA-NC-A5HL-01A 2 4 Out-of-frame Inter-chr p11.32 q13.33 Seq+ 96169 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASA2-SPSB4 RASA2 chr3 141540609 + SPSB4 chr3 141147142 + Exonic hg38 LUSC TCGA-NC-A5HL-01A 1 5 Out-of-frame Intra-chr q23 q23 Seq+ 96170 ChimerSeq TCGA FAWG TCGA_RNA-Seq COX7B2-PIP4K2A COX7B2 chr4 46909160 - PIP4K2A chr10 22609717 - Exonic hg38 LUSC TCGA-NC-A5HM-01A 2 3 5'UTR-5'UTR Inter-chr p12 p12.2 Seq+ 96171 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCA4-KDM4B SMARCA4 chr19 10989443 + KDM4B chr19 5071010 + Exonic hg38 LUSC TCGA-NC-A5HM-01A 1 6 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.3 Seq+ 96172 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN4-GRID1 PTPN4 chr2 119809991 + GRID1 chr10 85729614 - Exonic hg38 LUSC TCGA-NC-A5HM-01A 1 5 In-Frame Inter-chr q14.2 q23.2 Seq+ 96173 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNB1-NADK GNB1 chr1 1890820 - NADK chr1 1765446 - Exonic hg38 LUSC TCGA-NC-A5HN-01A 21 4 5'UTR-5'UTR Intra-chr p36.33 p36.33 Seq+ 96174 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO17-ACTN4 FBXO17 chr19 38975586 - ACTN4 chr19 38700600 + Exonic hg38 LUSC TCGA-NC-A5HN-01A 2 38 5'UTR-3'UTR Intra-chr Seq+ 96175 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTKN-CTF1 RTKN chr2 74441706 - CTF1 chr16 30899415 + Exonic hg38 LUSC TCGA-NC-A5HN-01A 2 21 CDS-3'UTR Inter-chr p13.1 p11.2 Seq+ 96176 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHBP1-VAV2 EHBP1 chr2 62874532 + VAV2 chr9 133861432 - Exonic hg38 LUSC TCGA-NC-A5HN-01A 3 12 In-Frame Inter-chr p15 q34.2 Seq+ 96177 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMCC1-QSOX2 TMCC1 chr3 129827803 - QSOX2 chr9 136224909 - Exonic hg38 LUSC TCGA-NC-A5HN-01A 2 8 In-Frame Inter-chr q22.1 q34.3 Seq+ 96178 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1217-LPP KIAA1217 chr10 24239337 + LPP chr3 188524665 + Exonic hg38 LUSC TCGA-NC-A5HP-01A 1 7 5'UTR-CDS Inter-chr p12.2 q27.3 Oncogene Seq+ 96179 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM86JP-POPDC2 FAM86JP chr3 125920905 + POPDC2 chr3 119654613 - Exonic hg38 LUSC TCGA-NC-A5HP-01A 1 4 5'UTR-CDS Intra-chr q21.2 q13.33 96180 ChimerSeq TCGA FAWG TCGA_RNA-Seq SARNP-VAMP8 SARNP chr12 55789075 - VAMP8 chr2 85579009 + Exonic hg38 LUSC TCGA-NC-A5HQ-01A 30 99 In-Frame Inter-chr q13.2 p11.2 Seq+ 96181 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDH3A1-ULK2 ALDH3A1 chr17 19748259 - ULK2 chr17 19826186 - Exonic hg38 LUSC TCGA-NC-A5HQ-01A 1 4 5'UTR-CDS Intra-chr p11.2 p11.2 Other:ULK 96182 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC35A3-C1orf194 SLC35A3 chr1 99970162 + C1orf194 chr1 109106659 - Exonic hg38 LUSC TCGA-NC-A5HR-01A 1 37 5'UTR-CDS Intra-chr p21.2 p13.3 Seq+ 96183 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF521-PVT1 ZNF521 chr18 25224345 - PVT1 chr8 128096518 + Exonic hg38 LUSC TCGA-NC-A5HR-01A 1 9 CDS-5'UTR Inter-chr q11.2 Oncogene Transcription factor q24.21 96184 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMP2K-CDS1 BMP2K chr4 78776721 + CDS1 chr4 84631819 + Exonic hg38 LUSC TCGA-NC-A5HT-01A 6 5 In-Frame Intra-chr q21.21 q21.23 Tumor suppressor gene Seq+ 96185 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMO-TSPAN33 SMO chr7 129189482 + TSPAN33 chr7 129161679 + Exonic hg38 LUSC TCGA-NC-A5HT-01A 1 10 Out-of-frame Intra-chr q32.1 Oncogene q32.1 Seq+ 96186 ChimerSeq TCGA FAWG TCGA_RNA-Seq INPP4B-NAA15 INPP4B chr4 142402938 - NAA15 chr4 139334174 + Exonic hg38 LUSC TCGA-NC-A5HT-01A 1 6 In-Frame Intra-chr q31.21 Tumor suppressor gene q31.1 96187 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDHD1-GCH1 WDHD1 chr14 55026711 - GCH1 chr14 54865436 - Exonic hg38 LUSC TCGA-NC-A5HT-01A 1 5 Out-of-frame Intra-chr q22.3 q22.2 96188 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGF12-ZNF595 FGF12 chr3 192727181 - ZNF595 chr4 59430 + Exonic hg38 LUSC TCGA-NK-A5CR-01A 4 3 Out-of-frame Inter-chr q29 p16.3 Transcription factor Seq+ 96189 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K4-FRMD1 MAP3K4 chr6 160992083 + FRMD1 chr6 168079024 - Exonic hg38 LUSC TCGA-NK-A5CR-01A 1 4 CDS-3'UTR Intra-chr q26 STE:STE11 Tumor suppressor gene q27 Seq+ 96190 ChimerSeq TCGA FAWG TCGA_RNA-Seq TACC1-ADAM9 TACC1 chr8 38788819 + ADAM9 chr8 39041946 + Exonic hg38 LUSC TCGA-NK-A5CR-01A 1 4 CDS-3'UTR Intra-chr p11.22 Seq+ 96191 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT2B-TACC1P1 KAT2B chr3 20072459 + TACC1P1 chr10 37523011 + Exonic hg38 LUSC TCGA-NK-A5CT-01A 1 5 Out-of-frame Inter-chr p24.3 p11.21 96192 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL22-DENND5A KLHL22 chr22 20495760 - DENND5A chr11 9207632 - Exonic hg38 LUSC TCGA-NK-A5CX-01A 1 8 5'UTR-5'UTR Inter-chr q11.21 p15.4 Seq+ 96193 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR548XHG-CXADR MIR548XHG chr21 18589527 - CXADR chr21 17558976 + Exonic hg38 LUSC TCGA-NK-A5D1-01A 2 17 3'UTR-CDS Intra-chr q21.1 q21.1 96194 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KA3-FAM156B RPS6KA3 chrX 20266564 - FAM156B chrX 52899059 + Exonic hg38 LUSC TCGA-NK-A5D1-01A 3 11 CDS-5'UTR Intra-chr p22.12 p11.22 96195 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP85-NR5A2 NUP85 chr17 75205794 + NR5A2 chr1 200111202 + Exonic hg38 LUSC TCGA-NK-A5D1-01A 2 8 In-Frame Inter-chr q25.1 q32.1 Transcription factor Seq+ 96196 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF180-YWHAE ZNF180 chr19 44479283 - YWHAE chr17 1345499 - Exonic hg38 LUSC TCGA-NK-A5D1-01A 1 12 5'UTR-5'UTR Inter-chr q13.31 Transcription factor p13.3 96197 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLPTM1-OPA3 CLPTM1 chr19 44962075 + OPA3 chr19 45553911 - Exonic hg38 LUSC TCGA-NK-A5D1-01A 2 3 Out-of-frame Intra-chr q13.32 q13.32 Seq+ 96198 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD27-DPY19L3 ANKRD27 chr19 32675071 - DPY19L3 chr19 32453145 + Exonic hg38 LUSC TCGA-NK-A5D1-01A 1 3 5'UTR-CDS Intra-chr q13.11 q13.11 Seq+ 96199 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS5-C11orf98 INTS5 chr11 62653170 - C11orf98 chr11 62663333 - Exonic hg38 LUSC TCGA-NK-A7XE-01A 8 78 In-Frame Intra-chr q12.3 q12.3 96200 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS5-LBHD1 INTS5 chr11 62653170 - LBHD1 chr11 62663333 - Exonic hg38 LUSC TCGA-NK-A7XE-01A 8 78 Out-of-frame Intra-chr q12.3 q12.3 96201 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBP1-NMNAT3 RBP1 chr3 139518421 - NMNAT3 chr3 139579055 - Exonic hg38 LUSC TCGA-O2-A52N-01A 4 10 Out-of-frame Intra-chr q23 Tumor suppressor gene q23 Seq+ 96202 ChimerSeq TCGA FAWG TCGA_RNA-Seq HARS-TMCO6 HARS chr5 140676654 - TMCO6 chr5 140639739 + Exonic hg38 LUSC TCGA-O2-A52N-01A 4 6 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 96203 ChimerSeq TCGA FAWG TCGA_RNA-Seq URGCP-UPP1 URGCP chr7 43926132 - UPP1 chr7 48094763 + Exonic hg38 LUSC TCGA-O2-A52N-01A 2 13 5'UTR-5'UTR Intra-chr p13 p12.3 Seq+ 96204 ChimerSeq TCGA FAWG TCGA_RNA-Seq LANCL2-CHODL LANCL2 chr7 55366229 + CHODL chr21 18256509 + Exonic hg38 LUSC TCGA-O2-A52N-01A 1 6 Out-of-frame Inter-chr p11.2 q21.1 Seq+ 96205 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGFR-CHODL EGFR chr7 55019365 + CHODL chr21 18256509 + Exonic hg38 LUSC TCGA-O2-A52N-01A 1 5 In-Frame Inter-chr p11.2 TK:EGFR Oncogene q21.1 96206 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF3G-ZNF560 EIF3G chr19 10116800 - ZNF560 chr19 9475369 - Exonic hg38 LUSC TCGA-O2-A52Q-01A 1 10 CDS-5'UTR Intra-chr p13.2 p13.2 Transcription factor Seq+ 96207 ChimerSeq TCGA FAWG TCGA_RNA-Seq DUSP14-ATP6V0A1 DUSP14 chr17 37489952 + ATP6V0A1 chr17 42477638 + Exonic hg38 LUSC TCGA-O2-A52S-01A 20 298 Out-of-frame Intra-chr q12 q21.2 Seq+ 96208 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3AP1-TM9SF3 PIK3AP1 chr10 96709567 - TM9SF3 chr10 96565426 - Exonic hg38 LUSC TCGA-O2-A52S-01A 4 11 In-Frame Intra-chr q24.1 q24.1 Seq+ 96209 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K3-FCHSD2 MAP3K3 chr17 63632802 + FCHSD2 chr11 73015885 - Exonic hg38 LUSC TCGA-O2-A52S-01A 3 14 In-Frame Inter-chr q23.3 STE:STE11 q13.4 Seq+ 96210 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC6A-METTL9 TNRC6A chr16 24729846 + METTL9 chr16 21655227 + Exonic hg38 LUSC TCGA-O2-A52S-01A 1 20 CDS-5'UTR Intra-chr p12.1 96211 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHLDB2-TAGLN3 PHLDB2 chr3 111920419 + TAGLN3 chr3 112011763 + Exonic hg38 LUSC TCGA-O2-A52S-01A 1000 1000 Out-of-frame Intra-chr q13.2 q13.2 96212 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP10D-GABRA2 ATP10D chr4 47525642 + GABRA2 chr4 46250604 - Exonic hg38 LUSC TCGA-O2-A52V-01A 20 79 Out-of-frame Intra-chr p12 p12 Seq+ 96213 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUL3-SPAG16 CUL3 chr2 224495832 - SPAG16 chr2 213310059 + Exonic hg38 LUSC TCGA-O2-A52V-01A 12 72 In-Frame Intra-chr q36.2 q34 Seq+ 96214 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAG16-CUL3 SPAG16 chr2 213297357 + CUL3 chr2 224482078 - Exonic hg38 LUSC TCGA-O2-A52V-01A 7 59 In-Frame Intra-chr q34 q36.2 Seq+ 96215 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRIM2-NKAIN2 PRIM2 chr6 57326045 + NKAIN2 chr6 124355267 + Exonic hg38 LUSC TCGA-O2-A52V-01A 3 24 In-Frame Intra-chr p11.2 q22.31 Seq+ 96216 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACIN1-SHTN1 ACIN1 chr14 23090522 - SHTN1 chr10 116940612 - Exonic hg38 LUSC TCGA-O2-A52V-01A 4 17 Out-of-frame Inter-chr q11.2 q25.3 96217 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOSC7-ZDHHC3 EXOSC7 chr3 44976334 + ZDHHC3 chr3 44959460 - Exonic hg38 LUSC TCGA-O2-A5IB-01A 26 70 5'UTR-5'UTR Intra-chr p21.31 Seq+ 96218 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF75D-UBR2 ZNF75D chrX 135341768 - UBR2 chr6 42659656 + Exonic hg38 LUSC TCGA-O2-A5IB-01A 7 65 5'UTR-CDS Inter-chr q26.3 Transcription factor p21.1 Seq+ 96219 ChimerSeq TCGA FAWG TCGA_RNA-Seq BUB1B-PCM1 BUB1B chr15 40176673 + PCM1 chr8 17985447 + Exonic hg38 LUSC TCGA-O2-A5IB-01A 2 22 Out-of-frame Inter-chr q15.1 Oncogene p22 Seq+ 96220 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBAP1-UNC13B UBAP1 chr9 34220948 + UNC13B chr9 35258993 + Exonic hg38 LUSC TCGA-O2-A5IB-01A 2 16 In-Frame Intra-chr p13.3 p13.3 Seq+ 96221 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6R3-MGAM PPP6R3 chr11 68519651 + MGAM chr7 142005529 + Exonic hg38 LUSC TCGA-O2-A5IB-01A 1 12 5'UTR-3'UTR Inter-chr q13.2 Seq+ 96222 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBA6-TMPRSS11D UBA6 chr4 67629071 - TMPRSS11D chr4 67859678 - Exonic hg38 LUSC TCGA-XC-AA0X-01A 2 5 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 96223 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF850-WTIP ZNF850 chr19 36762305 - WTIP chr19 34490376 + Exonic hg38 LUSC TCGA-XC-AA0X-01A 1 7 In-Frame Intra-chr q13.12 Transcription factor q13.11 Seq+ 96224 ChimerSeq TCGA FAWG TCGA_RNA-Seq INO80C-POLA1 INO80C chr18 35497719 - POLA1 chrX 24888006 + Exonic hg38 MESO TCGA-3H-AB3L-01A 2 1 In-Frame Inter-chr q12.2 p22.11 Seq+ 96225 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT9-COL7A1 SEPT9 chr17 77307197 + COL7A1 chr3 48586689 - Exonic hg38 MESO TCGA-3H-AB3M-01A 36 166 Out-of-frame Inter-chr p21.31 Seq+ 96226 ChimerSeq TCGA FAWG TCGA_RNA-Seq VCAN-GABRA5 VCAN chr5 83553522 + GABRA5 chr15 26943215 + Exonic hg38 MESO TCGA-3H-AB3M-01A 18 108 In-Frame Inter-chr q14.2 q12 Seq+ 96227 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLXIP-APTR MLXIP chr12 122079266 + APTR chr7 77661333 - Exonic hg38 MESO TCGA-3H-AB3M-01A 13 48 3'UTR-3'UTR Inter-chr Transcription factor q11.23 96228 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB42-RPUSD2 EPB42 chr15 43203115 - RPUSD2 chr15 40571604 + Exonic hg38 MESO TCGA-3H-AB3M-01A 9 10 In-Frame Intra-chr q15.2 q15.1 Seq+ 96229 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPKBP1-EPB42 MAPKBP1 chr15 41775389 + EPB42 chr15 43203275 - Exonic hg38 MESO TCGA-3H-AB3M-01A 5 16 Out-of-frame Intra-chr q15.1 q15.2 Seq+ 96230 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZCCHC8-PTPN12 ZCCHC8 chr12 122480190 - PTPN12 chr7 77632348 + Exonic hg38 MESO TCGA-3H-AB3M-01A 4 7 Out-of-frame Inter-chr q24.31 q11.23 Tumor suppressor gene Seq+ 96231 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPKBP1-RPUSD2 MAPKBP1 chr15 41775389 + RPUSD2 chr15 40571604 + Exonic hg38 MESO TCGA-3H-AB3M-01A 3 10 In-Frame Intra-chr q15.1 q15.1 Seq+ 96232 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGM1-CHN1 PGM1 chr1 63651852 + CHN1 chr2 174811588 - Exonic hg38 MESO TCGA-3H-AB3M-01A 1 6 Out-of-frame Inter-chr p31.3 q31.1 Seq+ 96233 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKIV2L2-CKS1B SKIV2L2 chr5 55340184 + CKS1B chr1 154977987 + Exonic hg38 MESO TCGA-3H-AB3M-01A 2 2 Out-of-frame Inter-chr q11.2 q21.3 Oncogene 96234 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP63-AGPS CEP63 chr3 134552012 + AGPS chr2 177538074 + Exonic hg38 MESO TCGA-3H-AB3S-01A 6 26 Out-of-frame Inter-chr q22.2 q31.2 Seq+ 96235 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF10-ADGB ARHGEF10 chr8 1843436 + ADGB chr6 146700941 + Exonic hg38 MESO TCGA-3H-AB3S-01A 4 10 3'UTR-CDS Inter-chr q24.3 96236 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGA-WDR66 MGA chr15 41757839 + WDR66 chr12 121942534 + Exonic hg38 MESO TCGA-3H-AB3S-01A 2 8 Out-of-frame Inter-chr q15.1 Transcription factor q24.31 Seq+ 96237 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSL2-MECOM MSL2 chr3 136194972 - MECOM chr3 169149755 - Exonic hg38 MESO TCGA-3H-AB3U-01A 1 6 CDS-5'UTR Intra-chr q22.3 q26.2 Transcription factor 96238 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP11A-COL14A1 ATP11A chr13 112690455 + COL14A1 chr8 120147806 + Exonic hg38 MESO TCGA-3U-A98D-01A 7 16 CDS-5'UTR Inter-chr q34 q24.12 Seq+ 96239 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBAP2L-AQP10 UBAP2L chr1 154228725 + AQP10 chr1 154322982 + Exonic hg38 MESO TCGA-3U-A98D-01A 1000 1000 Out-of-frame Intra-chr q21.3 q21.3 96240 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM19A4-COL8A1 FAM19A4 chr3 68932240 - COL8A1 chr3 99744897 + Exonic hg38 MESO TCGA-3U-A98F-01A 2 2 Out-of-frame Intra-chr p14.1 q12.1 96241 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPAP1-IGKJ4 RPAP1 chr15 41522907 - IGKJ4 chr2 88860920 - Exonic hg38 MESO TCGA-3U-A98H-01A 13 0 Out-of-frame Inter-chr q15.1 p11.2 96242 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA9-NDUFA8 ITGA9 chr3 37732798 + NDUFA8 chr9 122144378 - Exonic hg38 MESO TCGA-3U-A98H-01A 1 12 In-Frame Inter-chr p22.2 Oncogene q33.2 96243 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD51D-MAP2K4 RAD51D chr17 35101201 - MAP2K4 chr17 12081356 + Exonic hg38 MESO TCGA-3U-A98I-01A 4 1 Out-of-frame Intra-chr q12 p12 STE:STE7 Oncogene Tumor suppressor gene Seq+ 96244 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD51L3-MAP2K4 RAD51L3 chr17 35101201 - MAP2K4 chr17 12081356 + Exonic hg38 MESO TCGA-3U-A98I-01A 4 1 Out-of-frame Intra-chr p12 STE:STE7 Oncogene Tumor suppressor gene 96245 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNA2D1-HGF CACNA2D1 chr7 82005423 - HGF chr7 81758804 - Exonic hg38 MESO TCGA-3U-A98I-01A 1 3 Out-of-frame Intra-chr q21.11 q21.11 Oncogene 96246 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP13-CASC4 AKAP13 chr15 85585823 + CASC4 chr15 44331988 + Exonic hg38 MESO TCGA-LK-A4NY-01A 13 19 Out-of-frame Intra-chr q25.3 q15.3 Seq+ 96247 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEL-IGHJ4 CEL chr9 133071611 + IGHJ4 chr14 105864250 - Exonic hg38 MESO TCGA-LK-A4NY-01A 9 0 Out-of-frame Inter-chr q34.13 96248 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALPK1-GALNTL6 ALPK1 chr4 112297469 + GALNTL6 chr4 172882790 + Exonic hg38 MESO TCGA-LK-A4NY-01A 3 6 5'UTR-CDS Intra-chr q25 q34.1 Seq+ 96249 ChimerSeq TCGA FAWG TCGA_RNA-Seq TENM2-RALGPS1 TENM2 chr5 167993182 + RALGPS1 chr9 127210695 + Exonic hg38 MESO TCGA-LK-A4NY-01A 1 3 Out-of-frame Inter-chr q34 q33.3 96250 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRIM1-AFF3 CRIM1 chr2 36442735 + AFF3 chr2 99752301 - Exonic hg38 MESO TCGA-LK-A4O0-01A 1 7 Out-of-frame Intra-chr p22.2 q11.2 Oncogene Seq+ 96251 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACY1-BAP1 ACY1 chr3 51987624 + BAP1 chr3 52407460 - Exonic hg38 MESO TCGA-LK-A4O5-01A 9 15 In-Frame Intra-chr p21.2 Tumor suppressor gene p21.1 Oncogene Tumor suppressor gene Seq+ 96252 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFT74-HECTD4 IFT74 chr9 26962087 + HECTD4 chr12 112183266 - Exonic hg38 MESO TCGA-LK-A4O5-01A 7 6 In-Frame Inter-chr p21.2 q24.13 Seq+ 96253 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTAP-LINGO2 MTAP chr9 21854870 + LINGO2 chr9 28476025 - Exonic hg38 MESO TCGA-LK-A4O5-01A 1 18 CDS-5'UTR Intra-chr p21.3 Tumor suppressor gene p21.1 Seq+ 96254 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLLT3-SYT10 MLLT3 chr9 20620654 - SYT10 chr12 33407356 - Exonic hg38 MESO TCGA-LK-A4O5-01A 1 17 Out-of-frame Inter-chr p21.3 p11.1 Seq+ 96255 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBX3-SH3GL2 PBX3 chr9 125748623 + SH3GL2 chr9 17747066 + Exonic hg38 MESO TCGA-LK-A4O5-01A 2 13 Out-of-frame Intra-chr q33.3 Transcription factor p22.2 Seq+ 96256 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF2-PIAS1 NF2 chr22 29604112 + PIAS1 chr15 68086306 + Exonic hg38 MESO TCGA-LK-A4O7-01A 2 12 In-Frame Inter-chr q12.2 Oncogene Tumor suppressor gene q23 Tumor suppressor gene Seq+ 96257 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD6-GNG2 FRMD6 chr14 51651996 + GNG2 chr14 51950650 + Exonic hg38 MESO TCGA-LK-A4O7-01A 1 6 5'UTR-5'UTR Intra-chr q22.1 q22.1 96258 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRAMD2-SENP8 GRAMD2 chr15 72162273 - SENP8 chr15 72139577 + Exonic hg38 MESO TCGA-LK-A4O7-01A 1 2 Out-of-frame Intra-chr q23 q23 96259 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO6-CRYL1 MYO6 chr6 75749423 + CRYL1 chr13 20413387 - Exonic hg38 MESO TCGA-MQ-A4KX-01A 6 8 5'UTR-CDS Inter-chr q14.1 q12.11 Seq+ 96260 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAP1-TCEA3 BAP1 chr3 52405765 - TCEA3 chr1 23419139 - Exonic hg38 MESO TCGA-MQ-A4LC-01A 5 55 CDS-5'UTR Inter-chr p21.1 Oncogene Tumor suppressor gene Seq+ 96261 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRR15L-CDK5RAP3 PRR15L chr17 47957657 - CDK5RAP3 chr17 47973519 + Exonic hg38 MESO TCGA-MQ-A4LC-01A 10 28 5'UTR-5'UTR Intra-chr q21.32 q21.32 Seq+ 96262 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD9-MMP2 CHD9 chr16 53055077 + MMP2 chr16 55464552 + Exonic hg38 MESO TCGA-MQ-A4LJ-01A 5 20 5'UTR-5'UTR Intra-chr q12.2 q12.2 Oncogene 96263 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFP1-TERF2IP ZFP1 chr16 75148643 + TERF2IP chr16 75760050 + Exonic hg38 MESO TCGA-MQ-A4LM-01A 4 17 3'UTR-3'UTR Intra-chr q23.1 Transcription factor q23.1 96264 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF589-LRRFIP2 ZNF589 chr3 48260939 + LRRFIP2 chr3 37149038 - Exonic hg38 MESO TCGA-MQ-A4LM-01A 2 4 CDS-5'UTR Intra-chr p21.31 Transcription factor p22.2 Seq+ 96265 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBRM1-FBXW12 PBRM1 chr3 52558249 - FBXW12 chr3 48375354 + Exonic hg38 MESO TCGA-MQ-A4LM-01A 1 4 In-Frame Intra-chr p21.1 Oncogene Tumor suppressor gene p21.31 Seq+ 96266 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1orf112-OR5H14 C1orf112 chr1 169683625 + OR5H14 chr3 98149368 + Exonic hg38 MESO TCGA-MQ-A4LM-01A 1000 1000 Out-of-frame Inter-chr q24.2 q11.2 96267 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATRX-ARHGEF9 ATRX chrX 77785982 - ARHGEF9 chrX 63655737 - Exonic hg38 MESO TCGA-MQ-A4LP-01A 16 74 Out-of-frame Intra-chr q21.1 Oncogene q11.2 Seq+ 96268 ChimerSeq TCGA FAWG TCGA_RNA-Seq C19orf25-PEPD C19orf25 chr19 1478774 - PEPD chr19 33391479 - Exonic hg38 MESO TCGA-MQ-A4LP-01A 8 24 In-Frame Intra-chr p13.3 q13.11 Seq+ 96269 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF780A-SAMD4B ZNF780A chr19 40081819 - SAMD4B chr19 39369655 + Exonic hg38 MESO TCGA-MQ-A4LP-01A 3 4 5'UTR-CDS Intra-chr Transcription factor q13.2 Seq+ 96270 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST5-HBG2 ST5 chr11 8910821 - HBG2 chr11 5255165 - Exonic hg38 MESO TCGA-MQ-A4LV-01A 2 5 5'UTR-5'UTR Intra-chr p15.4 Tumor suppressor gene p15.4 96271 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL19-ITLN1 RPL19 chr17 39201319 + ITLN1 chr1 160876816 - Exonic hg38 MESO TCGA-MQ-A6BR-01A 1 1 Out-of-frame Inter-chr q12 q23.3 96272 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTRF-TUBBP9 PTRF chr17 42422627 - TUBBP9 chr6 39999492 + Exonic hg38 MESO TCGA-NQ-A638-01A 5 30 Out-of-frame Inter-chr p21.2 96273 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHG1-GJA1 PLEKHG1 chr6 150768738 + GJA1 chr6 121446832 + Exonic hg38 MESO TCGA-SC-A6LM-01A 7 13 CDS-5'UTR Intra-chr q25.1 q22.31 Tumor suppressor gene Seq+ 96274 ChimerSeq TCGA FAWG TCGA_RNA-Seq TASP1-TRDN TASP1 chr20 13629934 - TRDN chr6 123279082 - Exonic hg38 MESO TCGA-SC-A6LM-01A 3 4 In-Frame Inter-chr p12.1 q22.31 Seq+ 96275 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAN1A1-MCM9 MAN1A1 chr6 119179857 - MCM9 chr6 118934990 - Exonic hg38 MESO TCGA-SC-A6LM-01A 3 3 Out-of-frame Intra-chr q22.31 q22.31 Tumor suppressor gene Seq+ 96276 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD2-MACROD2 SETD2 chr3 47083720 - MACROD2 chr20 14085621 + Exonic hg38 MESO TCGA-SC-A6LM-01A 2 5 Out-of-frame Inter-chr p21.31 Oncogene Tumor suppressor gene p12.1 Seq+ 96277 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARK2-SMOX PARK2 chr6 161548854 - SMOX chr20 4175030 + Exonic hg38 MESO TCGA-SC-A6LM-01A 1 5 Out-of-frame Inter-chr Tumor suppressor gene p13 Seq+ 96278 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV6-CIDEA ETV6 chr12 11650160 + CIDEA chr18 12274093 + Exonic hg38 MESO TCGA-SC-A6LN-01A 70 171 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor p11.21 Seq+ 96279 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTTN-DOK6 RTTN chr18 70166062 - DOK6 chr18 69757756 + Exonic hg38 MESO TCGA-SC-A6LN-01A 2 9 In-Frame Intra-chr q22.2 q22.2 Seq+ 96280 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC1-HSP90AB1 LRRC1 chr6 53795415 + HSP90AB1 chr6 44248630 + Exonic hg38 MESO TCGA-SC-A6LQ-01A 2 3 CDS-5'UTR Intra-chr p12.1 p21.1 Oncogene Seq+ 96281 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITLN1-C3 ITLN1 chr1 160883428 - C3 chr19 6702579 - Exonic hg38 MESO TCGA-SC-A6LR-01A 1 42 In-Frame Inter-chr q23.3 p13.3 96282 ChimerSeq TCGA FAWG TCGA_RNA-Seq VLDLR-SLC1A1 VLDLR chr9 2622271 + SLC1A1 chr9 4544567 + Exonic hg38 MESO TCGA-SH-A7BC-01A 8 11 In-Frame Intra-chr p24.2 p24.2 Seq+ 96283 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP12-SLC25A32 LRP12 chr8 104588819 - SLC25A32 chr8 103407784 - Exonic hg38 MESO TCGA-SH-A7BC-01A 4 1 In-Frame Intra-chr q22.3 q22.3 Seq+ 96284 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAP1-RILP BAP1 chr3 52409554 - RILP chr17 1648495 - Exonic hg38 MESO TCGA-SH-A7BD-01A 98 197 CDS-5'UTR Inter-chr p21.1 Oncogene Tumor suppressor gene Tumor suppressor gene Seq+ 96285 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCTN1-WDR54 DCTN1 chr2 74391794 - WDR54 chr2 74422870 + Exonic hg38 MESO TCGA-SH-A7BD-01A 12 11 5'UTR-CDS Intra-chr p13.1 p13.1 Seq+ 96286 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC123-HK1 CDC123 chr10 12198776 + HK1 chr10 69376934 + Exonic hg38 MESO TCGA-SH-A7BD-01A 7 7 In-Frame Intra-chr p14 q22.1 Seq+ 96287 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNXB-DDR1 TNXB chr6 32061397 - DDR1 chr6 30897379 + Exonic hg38 MESO TCGA-SH-A7BD-01A 3 21 5'UTR-3'UTR Intra-chr TK:DDR Seq+ 96288 ChimerSeq TCGA FAWG TCGA_RNA-Seq CATSPERG-RASSF1 CATSPERG chr19 38337504 + RASSF1 chr3 50332154 - Exonic hg38 MESO TCGA-SH-A7BD-01A 2 9 In-Frame Inter-chr q13.2 p21.31 Tumor suppressor gene Seq+ 96289 ChimerSeq TCGA FAWG TCGA_RNA-Seq C4A-TNXB C4A chr6 31984408 + TNXB chr6 32058390 - Exonic hg38 MESO TCGA-SH-A7BD-01A 1 6 3'UTR-5'UTR Intra-chr 96290 ChimerSeq TCGA FAWG TCGA_RNA-Seq CFAP54-CCDC60 CFAP54 chr12 96522189 + CCDC60 chr12 119488759 + Exonic hg38 MESO TCGA-SH-A9CT-01A 1 3 Out-of-frame Intra-chr q23.1 q24.23 96291 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIPA1L2-NTPCR SIPA1L2 chr1 232493527 - NTPCR chr1 232978163 + Exonic hg38 MESO TCGA-SH-A9CU-01A 4 15 In-Frame Intra-chr q42.2 q42.2 Seq+ 96292 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBCE-SIPA1L2 TBCE chr1 235367504 + SIPA1L2 chr1 232493660 - Exonic hg38 MESO TCGA-SH-A9CU-01A 4 5 3'UTR-CDS Intra-chr q42.2 Seq+ 96293 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF111-MAPKAP1 RNF111 chr15 58988068 + MAPKAP1 chr9 125585727 - Exonic hg38 MESO TCGA-SH-A9CU-01A 3 8 5'UTR-5'UTR Inter-chr q22.1 Tumor suppressor gene q33.3 Seq+ 96294 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC40-MINOS1 LRRC40 chr1 70205390 - MINOS1 chr1 19623474 + Exonic hg38 MESO TCGA-TS-A7OY-01A 2 33 Out-of-frame Intra-chr p31.1 p36.13 Seq+ 96295 ChimerSeq TCGA FAWG TCGA_RNA-Seq APBA2-OCA2 APBA2 chr15 28921749 + OCA2 chr15 27851475 - Exonic hg38 MESO TCGA-TS-A7OY-01A 3 19 3'UTR-5'UTR Intra-chr q13.1 Seq+ 96296 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE4D-PLK2 PDE4D chr5 59038859 - PLK2 chr5 58459092 - Exonic hg38 MESO TCGA-TS-A7OY-01A 1 4 In-Frame Intra-chr q12.1 q11.2 Other:PLK Tumor suppressor gene 96297 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRIP1-IGSF8 NRIP1 chr21 15014344 - IGSF8 chr1 160092695 - Exonic hg38 MESO TCGA-TS-A7OZ-01A 6 15 5'UTR-CDS Inter-chr q21.1 q23.2 Seq+ 96298 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPKBP1-EHD4 MAPKBP1 chr15 41799914 + EHD4 chr15 41909863 - Exonic hg38 MESO TCGA-TS-A7OZ-01A 5 13 Out-of-frame Intra-chr q15.1 q15.1 Seq+ 96299 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK33-CHRNB4 STK33 chr11 8440678 - CHRNB4 chr15 78708105 - Exonic hg38 MESO TCGA-TS-A7OZ-01A 4 10 CDS-5'UTR Inter-chr p15.4 CAMK:CAMK-Unique q25.1 Seq+ 96300 ChimerSeq TCGA FAWG TCGA_RNA-Seq EVA1C-TCP10L EVA1C chr21 32413013 + TCP10L chr21 32582415 - Exonic hg38 MESO TCGA-TS-A7OZ-01A 2 7 Out-of-frame Intra-chr q22.11 q22.11 Seq+ 96301 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGA-PLA2G4D MGA chr15 41750615 + PLA2G4D chr15 42081133 - Exonic hg38 MESO TCGA-TS-A7OZ-01A 2 3 In-Frame Intra-chr q15.1 Transcription factor q15.1 Seq+ 96302 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNC5B-ADAP2 UNC5B chr10 71287765 + ADAP2 chr17 30944907 + Exonic hg38 MESO TCGA-TS-A7OZ-01A 1 5 Out-of-frame Inter-chr q22.1 Tumor suppressor gene q11.2 Seq+ 96303 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRC2A-FKBPL PRRC2A chr6 31634557 + FKBPL chr6 32129854 - Exonic hg38 MESO TCGA-TS-A7P0-01A 3 72 3'UTR-5'UTR Intra-chr Seq+ 96304 ChimerSeq TCGA FAWG TCGA_RNA-Seq EML3-INTS5 EML3 chr11 62605113 - INTS5 chr11 62649999 - Exonic hg38 MESO TCGA-TS-A7P0-01A 6 8 In-Frame Intra-chr q12.3 q12.3 Seq+ 96305 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC35A4-MTSS1 SLC35A4 chr5 140565971 + MTSS1 chr8 124591235 - Exonic hg38 MESO TCGA-TS-A7P0-01A 6 8 5'UTR-CDS Inter-chr q31.3 q24.13 Tumor suppressor gene Seq+ 96306 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIOK3-C18orf8 RIOK3 chr18 23463079 + C18orf8 chr18 23531625 + Exonic hg38 MESO TCGA-TS-A7P0-01A 1000 1000 Out-of-frame Intra-chr q11.2 Atypical:RIO q11.2 96307 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHB-CDKN2A SHB chr9 38067929 - CDKN2A chr9 21968242 - Exonic hg38 MESO TCGA-TS-A7P1-01A 37 83 Out-of-frame Intra-chr p13.1 p21.3 Oncogene Tumor suppressor gene Seq+ 96308 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC14-FKBP5 ZDHHC14 chr6 157382266 + FKBP5 chr6 35720548 - Exonic hg38 MESO TCGA-TS-A7P1-01A 4 9 CDS-5'UTR Intra-chr q25.3 p21.31 Seq+ 96309 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKN2A-FASTKD3 CDKN2A chr9 21994139 - FASTKD3 chr5 7865983 - Exonic hg38 MESO TCGA-TS-A7P1-01A 2 7 In-Frame Inter-chr p21.3 Oncogene Tumor suppressor gene p15.31 Seq+ 96310 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAPD7-MTRR PAPD7 chr5 6714699 + MTRR chr5 7889095 + Exonic hg38 MESO TCGA-TS-A7P1-01A 1 3 Out-of-frame Intra-chr p15.31 p15.31 Oncogene Seq+ 96311 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLDND1-ARPP21 CLDND1 chr3 98522849 - ARPP21 chr3 35679787 + Exonic hg38 MESO TCGA-TS-A7P3-01A 4 7 5'UTR-5'UTR Intra-chr q11.2 p22.3 Seq+ 96312 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTBP1-SCGB1C1 PTBP1 chr19 799443 + SCGB1C1 chr11 193712 + Exonic hg38 MESO TCGA-TS-A7P6-01A 1 10 Out-of-frame Inter-chr p13.3 p15.5 Seq+ 96313 ChimerSeq TCGA FAWG TCGA_RNA-Seq C16orf70-SLC9A5 C16orf70 chr16 67145419 + SLC9A5 chr16 67262212 + Exonic hg38 MESO TCGA-TS-A7P6-01A 1 7 CDS-5'UTR Intra-chr q22.1 q22.1 96314 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZHX3-SMG9 ZHX3 chr20 41267463 - SMG9 chr19 43738217 - Exonic hg38 MESO TCGA-TS-A7P7-01A 13 70 5'UTR-CDS Inter-chr q12 Transcription factor q13.31 Seq+ 96315 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP3CC-PIWIL2 PPP3CC chr8 22513432 + PIWIL2 chr8 22352959 + Exonic hg38 MESO TCGA-TS-A7P7-01A 2 11 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.3 Tumor suppressor gene Seq+ 96316 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNM2-UBE3B PITPNM2 chr12 123034513 - UBE3B chr12 109497818 + Exonic hg38 MESO TCGA-TS-A7P7-01A 2 6 Out-of-frame Intra-chr q24.31 q24.11 Seq+ 96317 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELMO2-MYBL2 ELMO2 chr20 46394405 - MYBL2 chr20 43681784 + Exonic hg38 MESO TCGA-TS-A7P7-01A 1 7 In-Frame Intra-chr q13.12 q13.12 Transcription factor Seq+ 96318 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF578-MYH14 ZNF578 chr19 52456958 + MYH14 chr19 50263312 + Exonic hg38 MESO TCGA-TS-A7P7-01A 1 7 5'UTR-CDS Intra-chr q13.41 Transcription factor q13.33 96319 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXP1-AS4 FOXP1 chr3 71299820 - AS4 chr3 9256759 + Exonic hg38 MESO TCGA-TS-A7P8-01A 6 26 Out-of-frame Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor 96320 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACOX3-STAT1 ACOX3 chr4 8440648 - STAT1 chr2 190998308 - Exonic hg38 MESO TCGA-TS-A7P8-01A 3 22 5'UTR-CDS Inter-chr p16.1 q32.2 Tumor suppressor gene Transcription factor Seq+ 96321 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD44-ANKAR ANKRD44 chr2 197310578 - ANKAR chr2 189706938 + Exonic hg38 MESO TCGA-TS-A7P8-01A 1 5 Out-of-frame Intra-chr q33.1 q32.2 Seq+ 96322 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPD-PRKG2 HNRNPD chr4 82371528 - PRKG2 chr4 81110611 - Exonic hg38 MESO TCGA-TS-A8AF-01A 6 14 Out-of-frame Intra-chr q21.22 q21.21 Seq+ 96323 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBN1-TEX9 FBN1 chr15 48613010 - TEX9 chr15 56394165 + Exonic hg38 MESO TCGA-TS-A8AF-01A 4 8 In-Frame Intra-chr q21.1 q21.3 Seq+ 96324 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK14-SAV1 CDK14 chr7 91045960 + SAV1 chr14 50645014 - Exonic hg38 MESO TCGA-TS-A8AF-01A 1 3 In-Frame Inter-chr q21.13 q22.1 Seq+ 96325 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD4A-FAM107B FRMD4A chr10 14330058 - FAM107B chr10 14530515 - Exonic hg38 MESO TCGA-TS-A8AI-01A 7 22 Out-of-frame Intra-chr p13 p13 Seq+ 96326 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF2-CABP7 NF2 chr22 29604112 + CABP7 chr22 29727662 + Exonic hg38 MESO TCGA-TS-A8AI-01A 2 4 Out-of-frame Intra-chr q12.2 Oncogene Tumor suppressor gene q12.2 Seq+ 96327 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARPC2-RNASEH2B ARPC2 chr2 218249921 + RNASEH2B chr13 50945427 + Exonic hg38 MESO TCGA-TS-A8AV-01A 6 21 Out-of-frame Inter-chr q35 q14.3 Seq+ 96328 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM124A-SPRYD7 FAM124A chr13 51222569 + SPRYD7 chr13 49928085 - Exonic hg38 MESO TCGA-TS-A8AV-01A 1 4 Out-of-frame Intra-chr q14.3 q14.2 96329 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABO-HTR3B ABO chr9 133252478 - HTR3B chr11 113931384 + Exonic hg38 MESO TCGA-TS-A8AY-01A 15 89 5'UTR-CDS Inter-chr q23.2 Seq+ 96330 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM216A-IGF1 FAM216A chr12 110473118 + IGF1 chr12 102419690 - Exonic hg38 MESO TCGA-TS-A8AY-01A 12 66 In-Frame Intra-chr q24.11 q23.2 Tumor suppressor gene Seq+ 96331 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAX1BP1-RABGEF1 TAX1BP1 chr7 27769834 + RABGEF1 chr7 66795511 + Exonic hg38 MESO TCGA-TS-A8AY-01A 9 40 In-Frame Intra-chr p15.2 q11.21 Seq+ 96332 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSDL2-TEX10 HSDL2 chr9 112380180 + TEX10 chr9 100349372 - Exonic hg38 MESO TCGA-TS-A8AY-01A 13 15 5'UTR-5'UTR Intra-chr q32 q31.1 Seq+ 96333 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEX10-HSDL2 TEX10 chr9 100352772 - HSDL2 chr9 112403995 + Exonic hg38 MESO TCGA-TS-A8AY-01A 4 40 5'UTR-CDS Intra-chr q31.1 q32 Seq+ 96334 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIPK3-DPAGT1 HIPK3 chr11 33257889 + DPAGT1 chr11 119100408 - Exonic hg38 MESO TCGA-TS-A8AY-01A 2 20 5'UTR-CDS Intra-chr p13 CMGC:DYRK q23.3 Seq+ 96335 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLT1D1-CTNNA2 GLT1D1 chr12 128853649 + CTNNA2 chr2 80544982 + Exonic hg38 MESO TCGA-TS-A8AY-01A 2 7 Out-of-frame Inter-chr q24.33 p12 Tumor suppressor gene Seq+ 96336 ChimerSeq TCGA FAWG TCGA_RNA-Seq JAZF1-GTF2IRD1P1 JAZF1 chr7 27991909 - GTF2IRD1P1 chr7 66839934 - Exonic hg38 MESO TCGA-TS-A8AY-01A 1 8 CDS-3'UTR Intra-chr p15.1 Transcription factor q11.21 96337 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF1B-SGCZ TAF1B chr2 9845318 + SGCZ chr8 14554926 - Exonic hg38 MESO TCGA-TS-A8AY-01A 2 3 In-Frame Inter-chr p25.1 p22 Seq+ 96338 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL7L1-HIPK3 RPL7L1 chr6 42880966 + HIPK3 chr11 33347293 + Exonic hg38 MESO TCGA-TS-A8AY-01A 2 2 Out-of-frame Inter-chr p21.1 p13 CMGC:DYRK Seq+ 96339 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBR2-MED20 UBR2 chr6 42679832 + MED20 chr6 41909522 - Exonic hg38 MESO TCGA-TS-A8AY-01A 1 5 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 96340 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLT8D1-PLXNB1 GLT8D1 chr3 52695190 - PLXNB1 chr3 48404590 - Exonic hg38 MESO TCGA-UD-AABY-01A 4 9 Out-of-frame Intra-chr p21.1 p21.31 Seq+ 96341 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXNB1-ITIH3 PLXNB1 chr3 48429253 - ITIH3 chr3 52806103 + Exonic hg38 MESO TCGA-UD-AABY-01A 1 19 5'UTR-CDS Intra-chr p21.31 p21.1 Seq+ 96342 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOSC4-NEIL2 EXOSC4 chr8 144078900 + NEIL2 chr8 11779599 + Exonic hg38 MESO TCGA-UD-AAC4-01A 11 55 Out-of-frame Intra-chr q24.3 p23.1 Seq+ 96343 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSCP1-NF1 OSCP1 chr1 36450258 - NF1 chr17 31374013 + Exonic hg38 MESO TCGA-UD-AAC4-01A 9 36 In-Frame Inter-chr p34.3 Tumor suppressor gene q11.2 Oncogene Tumor suppressor gene Seq+ 96344 ChimerSeq TCGA FAWG TCGA_RNA-Seq NASP-EDN2 NASP chr1 45615400 + EDN2 chr1 41483275 - Exonic hg38 MESO TCGA-UD-AAC4-01A 4 18 Out-of-frame Intra-chr p34.1 p34.2 Seq+ 96345 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIAPH3-PCDH9 DIAPH3 chr13 59774189 - PCDH9 chr13 66903605 - Exonic hg38 MESO TCGA-UD-AAC5-01A 1 3 Out-of-frame Intra-chr q21.2 q21.32 Tumor suppressor gene 96346 ChimerSeq TCGA FAWG TCGA_RNA-Seq CARMIL1-DCDC2 CARMIL1 chr6 25540078 + DCDC2 chr6 24353623 - Exonic hg38 MESO TCGA-UD-AAC6-01A 3 6 Out-of-frame Intra-chr p22.2 p22.3 Tumor suppressor gene 96347 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAG7-KIF1C SPAG7 chr17 4967720 - KIF1C chr17 5006915 + Exonic hg38 MESO TCGA-UD-AAC7-01A 2 4 In-Frame Intra-chr p13.2 p13.2 96348 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKAG2-WASL PRKAG2 chr7 151595345 - WASL chr7 123709223 - Exonic hg38 MESO TCGA-UT-A88C-01B 11 57 In-Frame Intra-chr q36.1 q31.32 Seq+ 96349 ChimerSeq TCGA FAWG TCGA_RNA-Seq EOGT-SYNPR EOGT chr3 68998011 - SYNPR chr3 63480832 + Exonic hg38 MESO TCGA-UT-A88C-01B 1 8 In-Frame Intra-chr p14.1 p14.2 96350 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK39-SCN7A STK39 chr2 168012634 - SCN7A chr2 166477710 - Exonic hg38 MESO TCGA-UT-A88D-01B 1 6 CDS-5'UTR Intra-chr q24.3 q24.3 Seq+ 96351 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKT3-HEATR1 AKT3 chr1 243637611 - HEATR1 chr1 236550990 - Exonic hg38 MESO TCGA-UT-A88E-01B 36 113 5'UTR-CDS Intra-chr AGC:Akt Oncogene q43 Seq+ 96352 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALG9-PDGFD ALG9 chr11 111836165 - PDGFD chr11 103947724 - Exonic hg38 MESO TCGA-UT-A88E-01B 29 73 In-Frame Intra-chr q23.1 q22.3 Seq+ 96353 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNA2D3-SCAF11 CACNA2D3 chr3 54570104 + SCAF11 chr12 45964188 - Exonic hg38 MESO TCGA-UT-A88E-01B 4 7 CDS-5'UTR Inter-chr p21.1 Tumor suppressor gene q12 Seq+ 96354 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANK1-KCNV2 KANK1 chr9 504754 + KCNV2 chr9 2729446 + Exonic hg38 MESO TCGA-UT-A97Y-01A 2 2 5'UTR-CDS Intra-chr p24.3 Tumor suppressor gene p24.2 96355 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICA-NCR3 MICA chr6 31400763 + NCR3 chr6 31589899 - Exonic hg38 MESO TCGA-XT-AASU-01A 52 717 3'UTR-5'UTR Intra-chr p21.33 Seq+ 96356 ChimerSeq TCGA FAWG TCGA_RNA-Seq HCP5-NCR3 HCP5 chr6 31400763 + NCR3 chr6 31589899 - Exonic hg38 MESO TCGA-XT-AASU-01A 52 600 Out-of-frame Intra-chr p21.33 Seq+ 96357 ChimerSeq TCGA FAWG TCGA_RNA-Seq KPNA1-NCK1 KPNA1 chr3 122496437 - NCK1 chr3 136927984 + Exonic hg38 MESO TCGA-XT-AASU-01A 30 97 CDS-5'UTR Intra-chr q21.1 q22.3 Seq+ 96358 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPTXR-CHEK2 NPTXR chr22 38843235 - CHEK2 chr22 28734727 - Exonic hg38 MESO TCGA-XT-AASU-01A 4 9 CDS-5'UTR Intra-chr q13.1 q12.1 Oncogene Tumor suppressor gene 96359 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF197-OSBPL10 ZNF197 chr3 44586213 + OSBPL10 chr3 32046603 - Exonic hg38 MESO TCGA-XT-AASU-01A 2 11 Out-of-frame Intra-chr Transcription factor p22.3 Seq+ 96360 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF660-OSBPL10 ZNF660 chr3 44586213 + OSBPL10 chr3 32046603 - Exonic hg38 MESO TCGA-XT-AASU-01A 2 11 3'UTR-5'UTR Intra-chr Transcription factor p22.3 Seq+ 96361 ChimerSeq TCGA FAWG TCGA_RNA-Seq FXYD5-FXYD3 FXYD5 chr19 35154809 + FXYD3 chr19 35119363 + Exonic hg38 MESO TCGA-XT-AASU-01A 1 13 5'UTR-5'UTR Intra-chr q13.12 q13.12 96362 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC50-TBC1D5 CCDC50 chr3 191370036 + TBC1D5 chr3 17623913 - Exonic hg38 MESO TCGA-XT-AASU-01A 1 7 CDS-5'UTR Intra-chr q28 p24.3 96363 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPATS2L-SGO2 SPATS2L chr2 200389283 + SGO2 chr2 200526136 + Exonic hg38 MESO TCGA-YS-A95B-01A 4 5 CDS-5'UTR Intra-chr q33.1 q33.1 96364 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNNB1-DOCK3 CTNNB1 chr3 41239354 + DOCK3 chr3 50890026 + Exonic hg38 MESO TCGA-YS-A95C-01A 2 11 3'UTR-CDS Intra-chr p22.1 Oncogene p21.2 Seq+ 96365 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFAT5-NUP93 NFAT5 chr16 69566374 + NUP93 chr16 56798476 + Exonic hg38 MESO TCGA-YS-AA4M-01A 9 24 Out-of-frame Intra-chr q22.1 Transcription factor q13 Seq+ 96366 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBB3-RSPRY1 TUBB3 chr16 89923458 + RSPRY1 chr16 57204504 + Exonic hg38 MESO TCGA-YS-AA4M-01A 3 43 CDS-5'UTR Intra-chr q24.3 q13 Seq+ 96367 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF319-KCTD19 ZNF319 chr16 57997607 - KCTD19 chr16 67303339 - Exonic hg38 MESO TCGA-YS-AA4M-01A 3 13 Out-of-frame Intra-chr q21 Transcription factor q22.1 96368 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIEZO1-KCTD19 PIEZO1 chr16 88725416 - KCTD19 chr16 67303337 - Exonic hg38 MESO TCGA-YS-AA4M-01A 1 3 In-Frame Intra-chr q24.3 q22.1 96369 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD2-NISCH SETD2 chr3 47083720 - NISCH chr3 52470859 + Exonic hg38 MESO TCGA-ZN-A9VO-01A 1 13 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.1 Seq+ 96370 ChimerSeq TCGA FAWG TCGA_RNA-Seq IMPDH1-GRM8 IMPDH1 chr7 128403706 - GRM8 chr7 126904683 - Exonic hg38 MESO TCGA-ZN-A9VO-01A 1 4 Out-of-frame Intra-chr q32.1 q31.33 Oncogene 96371 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFATC3-PRMT7 NFATC3 chr16 68191775 + PRMT7 chr16 68352248 + Exonic hg38 MESO TCGA-ZN-A9VO-01A 1 4 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 96372 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDCA7L-PASD1 CDCA7L chr7 21916754 - PASD1 chrX 151659713 + Exonic hg38 MESO TCGA-ZN-A9VP-01A 153 416 In-Frame Inter-chr p15.3 q28 Seq+ 96373 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCK2-NUP93 NCK2 chr2 105855289 + NUP93 chr16 56748234 + Exonic hg38 MESO TCGA-ZN-A9VP-01A 23 126 CDS-5'UTR Inter-chr q12.2 q13 Seq+ 96374 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPUL1-DAB1 HNRNPUL1 chr19 41262582 + DAB1 chr1 57970865 - Exonic hg38 MESO TCGA-ZN-A9VP-01A 8 17 5'UTR-5'UTR Inter-chr q13.2 p32.1 Seq+ 96375 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41-PRAMEF12 EPB41 chr1 28887210 + PRAMEF12 chr1 12774867 + Exonic hg38 MESO TCGA-ZN-A9VP-01A 3 8 5'UTR-5'UTR Intra-chr p35.3 Tumor suppressor gene p36.21 96376 ChimerSeq TCGA FAWG TCGA_RNA-Seq GFER-TRAF7 GFER chr16 1984476 + TRAF7 chr16 2168077 + Exonic hg38 MESO TCGA-ZN-A9VP-01A 2 7 Out-of-frame Intra-chr p13.3 p13.3 Oncogene 96377 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41-C1orf158 EPB41 chr1 28887208 + C1orf158 chr1 12746456 + Exonic hg38 MESO TCGA-ZN-A9VP-01A 1000 1000 Out-of-frame Intra-chr p35.3 Tumor suppressor gene p36.21 96378 ChimerSeq TCGA FAWG TCGA_RNA-Seq NT5C2-LRIT1 NT5C2 chr10 103139406 - LRIT1 chr10 84234378 - Exonic hg38 MESO TCGA-ZN-A9VQ-01A 8 52 In-Frame Intra-chr q24.33 q23.1 Seq+ 96379 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIOK3-C10orf76 RIOK3 chr18 23453502 + C10orf76 chr10 101975300 - Exonic hg38 MESO TCGA-ZN-A9VQ-01A 5 25 Out-of-frame Inter-chr q11.2 Atypical:RIO q24.32 Seq+ 96380 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM241-TTC39C TMEM241 chr18 23399566 - TTC39C chr18 24114554 + Exonic hg38 MESO TCGA-ZN-A9VQ-01A 2 2 In-Frame Intra-chr q11.2 q11.2 Seq+ 96381 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFMBT1-ZDHHC3 SFMBT1 chr3 53045816 - ZDHHC3 chr3 44959460 - Exonic hg38 MESO TCGA-ZN-A9VU-01A 4 34 5'UTR-5'UTR Intra-chr p21.1 Seq+ 96382 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD2-SPATA12 SETD2 chr3 47113876 - SPATA12 chr3 57073366 + Exonic hg38 MESO TCGA-ZN-A9VW-01A 29 121 CDS-5'UTR Intra-chr p21.31 Oncogene Tumor suppressor gene p14.3 Seq+ 96383 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOSIP-TSKS NOSIP chr19 49580515 - TSKS chr19 49762232 - Exonic hg38 OV TCGA-04-1331-01A 16 0 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 96384 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGA-RTF1 MGA chr15 41736698 + RTF1 chr15 41438321 + Exonic hg38 OV TCGA-04-1337-01A 22 7 In-Frame Intra-chr q15.1 Transcription factor q15.1 Seq+ 96385 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGN2-WDTC1 HMGN2 chr1 26474667 + WDTC1 chr1 27287674 + Exonic hg38 OV TCGA-04-1337-01A 17 19 In-Frame Intra-chr p36.11 p36.11 Seq+ 96386 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPLP1-DRAIC RPLP1 chr15 69453020 + DRAIC chr15 69563116 + Exonic hg38 OV TCGA-04-1338-01A 6 3 5'UTR-5'UTR Intra-chr q23 q23 96387 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D5-AIG1 TBC1D5 chr3 17742481 - AIG1 chr6 143284110 + Exonic hg38 OV TCGA-04-1338-01A 5 4 5'UTR-5'UTR Inter-chr p24.3 q24.2 Seq+ 96388 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEC-TNNI1 PLEC chr8 143926784 - TNNI1 chr1 201421726 - Exonic hg38 OV TCGA-04-1338-01A 4 3 CDS-5'UTR Inter-chr q24.3 q32.1 Seq+ 96389 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNAS-IGF2 GNAS chr20 58911094 + IGF2 chr11 2132782 - Exonic hg38 OV TCGA-04-1338-01A 3 6 Out-of-frame Inter-chr q13.32 Oncogene p15.5 Oncogene Seq+ 96390 ChimerSeq TCGA FAWG TCGA_RNA-Seq EMID1-CBY1 EMID1 chr22 29234349 + CBY1 chr22 38673159 + Exonic hg38 OV TCGA-04-1341-01A 219 122 In-Frame Intra-chr q12.2 q13.1 Seq+ 96391 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF11-C8A RNF11 chr1 51236879 + C8A chr1 56881445 + Exonic hg38 OV TCGA-04-1341-01A 162 78 Out-of-frame Intra-chr p32.3 p32.2 Seq+ 96392 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF680-INTS4P1 ZNF680 chr7 64562925 - INTS4P1 chr7 65231541 + Exonic hg38 OV TCGA-04-1341-01A 144 22 CDS-5'UTR Intra-chr q11.21 Transcription factor q11.21 96393 ChimerSeq TCGA FAWG TCGA_RNA-Seq EMSY-CAPN5 EMSY chr11 76528466 + CAPN5 chr11 77084852 + Exonic hg38 OV TCGA-04-1341-01A 15 6 CDS-5'UTR Intra-chr q13.5 q13.5 96394 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC20-RRAGC CDC20 chr1 43361245 + RRAGC chr1 38846087 - Exonic hg38 OV TCGA-04-1341-01A 16 1 5'UTR-CDS Intra-chr p34.2 p34.3 Seq+ 96395 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM33-ABCA4 TRIM33 chr1 114510551 - ABCA4 chr1 93993242 - Exonic hg38 OV TCGA-04-1347-01A 15 5 Out-of-frame Intra-chr p13.2 Oncogene p22.1 Seq+ 96396 ChimerSeq TCGA FAWG TCGA_RNA-Seq STXBP6-PLEKHA4 STXBP6 chr14 24855936 - PLEKHA4 chr19 48838129 - Exonic hg38 OV TCGA-04-1347-01A 12 2 Out-of-frame Inter-chr q12 q13.33 Seq+ 96397 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDPK1-PRSS21 PDPK1 chr16 2586893 + PRSS21 chr16 2825970 + Exonic hg38 OV TCGA-04-1347-01A 8 0 CDS-3'UTR Intra-chr p13.3 Seq+ 96398 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDLR-LRPAP1 LDLR chr19 11089615 + LRPAP1 chr4 3513036 - Exonic hg38 OV TCGA-04-1348-01A 156 35 Out-of-frame Inter-chr p13.2 p16.3 Seq+ 96399 ChimerSeq TCGA FAWG TCGA_RNA-Seq DEPDC5-OSBP2 DEPDC5 chr22 31768863 + OSBP2 chr22 30905837 + Exonic hg38 OV TCGA-04-1348-01A 79 20 In-Frame Intra-chr q12.2 q12.2 Seq+ 96400 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIFR-TTC33 LIFR chr5 38523419 - TTC33 chr5 40613381 - Exonic hg38 OV TCGA-04-1348-01A 52 12 CDS-3'UTR Intra-chr p13.1 Oncogene Tumor suppressor gene p13.1 96401 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBLN2-LMCD1 FBLN2 chr3 13549208 + LMCD1 chr3 8532737 + Exonic hg38 OV TCGA-04-1348-01A 45 11 5'UTR-5'UTR Intra-chr p25.1 p25.3 Seq+ 96402 ChimerSeq TCGA FAWG TCGA_RNA-Seq RYBP-ARL13B RYBP chr3 72446496 - ARL13B chr3 93995874 + Exonic hg38 OV TCGA-04-1348-01A 30 12 5'UTR-5'UTR Intra-chr q11.1 Seq+ 96403 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB11B-HAUS3 RAB11B chr19 8402565 + HAUS3 chr4 2239043 - Exonic hg38 OV TCGA-04-1348-01A 15 4 Out-of-frame Inter-chr p13.2 p16.3 Seq+ 96404 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRL1-C19orf43 ADGRL1 chr19 14205985 - C19orf43 chr19 12731421 - Exonic hg38 OV TCGA-04-1350-01A 47 1 Out-of-frame Intra-chr p13.12 p13.13 96405 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANGAP1-DESI1 RANGAP1 chr22 41280933 - DESI1 chr22 41607861 - Exonic hg38 OV TCGA-04-1356-01A 33 18 In-Frame Intra-chr q13.2 q13.2 Seq+ 96406 ChimerSeq TCGA FAWG TCGA_RNA-Seq INSR-EIF6 INSR chr19 7267345 - EIF6 chr20 35280829 - Exonic hg38 OV TCGA-04-1356-01A 31 6 In-Frame Inter-chr p13.2 TK:InsR q11.22 Seq+ 96407 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAR1A-NODAL SAR1A chr10 70161004 - NODAL chr10 70435983 - Exonic hg38 OV TCGA-04-1356-01A 27 4 In-Frame Intra-chr q22.1 q22.1 Seq+ 96408 ChimerSeq TCGA FAWG TCGA_RNA-Seq TKFC-TMEM109 TKFC chr11 61345946 + TMEM109 chr11 60919686 + Exonic hg38 OV TCGA-04-1356-01A 18 2 CDS-5'UTR Intra-chr q12.2 q12.2 96409 ChimerSeq TCGA FAWG TCGA_RNA-Seq CARD10-POLR2F CARD10 chr22 37515973 - POLR2F chr22 38041068 + Exonic hg38 OV TCGA-04-1356-01A 16 3 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 96410 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCEL-LMO7 SCEL chr13 77556713 + LMO7 chr13 75853092 + Exonic hg38 OV TCGA-04-1356-01A 12 3 In-Frame Intra-chr q22.3 q22.2 Seq+ 96411 ChimerSeq TCGA FAWG TCGA_RNA-Seq UST-MYB UST chr6 148887029 + MYB chr6 135217864 + Exonic hg38 OV TCGA-04-1356-01A 9 4 In-Frame Intra-chr q25.1 q23.3 Oncogene Transcription factor Seq+ 96412 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF3-REXO1 TCF3 chr19 1619111 - REXO1 chr19 1815486 - Exonic hg38 OV TCGA-04-1357-01A 60 12 CDS-3'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p13.3 Seq+ 96413 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB7C-SCFD2 ZBTB7C chr18 48185934 - SCFD2 chr4 53274001 - Exonic hg38 OV TCGA-04-1361-01A 34 10 5'UTR-CDS Inter-chr q21.1 Tumor suppressor gene Transcription factor q12 Seq+ 96414 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRC2C-FRG2FP PRRC2C chr1 171524965 + FRG2FP chr3 198110284 + Exonic hg38 OV TCGA-04-1361-01A 29 13 Out-of-frame Inter-chr q24.3 q29 96415 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNHG12-ESRP1 SNHG12 chr1 28581590 - ESRP1 chr8 94678203 + Exonic hg38 OV TCGA-04-1361-01A 24 11 3'UTR-CDS Inter-chr p35.3 q22.1 Tumor suppressor gene Seq+ 96416 ChimerSeq TCGA FAWG TCGA_RNA-Seq NADK-MROH1 NADK chr1 1765228 - MROH1 chr8 144190784 + Exonic hg38 OV TCGA-04-1361-01A 20 7 Out-of-frame Inter-chr p36.33 q24.3 Seq+ 96417 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3IL1-NRG1 RAB3IL1 chr11 61899314 - NRG1 chr8 32727949 + Exonic hg38 OV TCGA-04-1362-01A 73 31 In-Frame Inter-chr q12.3 p12 Seq+ 96418 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEA1-MPG EEA1 chr12 92891629 - MPG chr16 79425 + Exonic hg38 OV TCGA-04-1362-01A 35 23 In-Frame Inter-chr q22 Transcription factor p13.3 Seq+ 96419 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOR2-CABLES2 NCOR2 chr12 124354093 - CABLES2 chr20 62396592 - Exonic hg38 OV TCGA-04-1362-01A 28 17 Out-of-frame Inter-chr q24.31 q13.33 Seq+ 96420 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA5-NCOR2 LAMA5 chr20 62351704 - NCOR2 chr12 124356806 - Exonic hg38 OV TCGA-04-1362-01A 27 19 Out-of-frame Inter-chr q13.33 q24.31 Seq+ 96421 ChimerSeq TCGA FAWG TCGA_RNA-Seq INPP5A-FRMD4A INPP5A chr10 132538171 + FRMD4A chr10 14330183 - Exonic hg38 OV TCGA-04-1362-01A 16 12 CDS-5'UTR Intra-chr q26.3 p13 Seq+ 96422 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD4A-TMEM45B FRMD4A chr10 14330058 - TMEM45B chr11 129852475 + Exonic hg38 OV TCGA-04-1362-01A 12 8 CDS-5'UTR Inter-chr p13 q24.3 Seq+ 96423 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPC-RIOK2 HNRNPC chr14 21262601 - RIOK2 chr5 97177848 - Exonic hg38 OV TCGA-04-1364-01A 17 2 5'UTR-CDS Inter-chr q11.2 q15 Atypical:RIO Seq+ 96424 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A42-GATAD2A SLC25A42 chr19 19106385 + GATAD2A chr19 19505344 + Exonic hg38 OV TCGA-04-1364-01A 15 3 Out-of-frame Intra-chr p13.11 p13.11 Transcription factor Seq+ 96425 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASGEF1A-SFTA1P RASGEF1A chr10 43198933 - SFTA1P chr10 10786755 - Exonic hg38 OV TCGA-04-1364-01A 7 3 CDS-3'UTR Intra-chr q11.21 p14 Seq+ 96426 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAST3-PDE4C MAST3 chr19 18142015 + PDE4C chr19 18252161 - Exonic hg38 OV TCGA-04-1365-01A 145 40 CDS-5'UTR Intra-chr p13.11 AGC:MAST p13.11 Seq+ 96427 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC42BPB-SYNJ2BP CDC42BPB chr14 102947721 - SYNJ2BP chr14 70375771 - Exonic hg38 OV TCGA-04-1365-01A 28 18 In-Frame Intra-chr q32.32 q24.2 Seq+ 96428 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX21-STOX1 DDX21 chr10 68956312 + STOX1 chr10 68881958 + Exonic hg38 OV TCGA-04-1365-01A 21 7 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 96429 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLVS1-RAB2A CLVS1 chr8 61057230 + RAB2A chr8 60618580 + Exonic hg38 OV TCGA-04-1365-01A 18 9 5'UTR-CDS Intra-chr q12.2 q12.1 Seq+ 96430 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF846-DNMT1 ZNF846 chr19 9785938 - DNMT1 chr19 10166685 - Exonic hg38 OV TCGA-04-1365-01A 13 8 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 96431 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF217-NKAIN2 RNF217 chr6 125045444 + NKAIN2 chr6 124791339 + Exonic hg38 OV TCGA-04-1365-01A 14 1 In-Frame Intra-chr q22.31 q22.31 Seq+ 96432 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRIK4-SESN1 GRIK4 chr11 120875243 + SESN1 chr6 109002343 - Exonic hg38 OV TCGA-04-1514-01A 11 1 In-Frame Inter-chr q23.3 q21 Seq+ 96433 ChimerSeq TCGA FAWG TCGA_RNA-Seq UTP18-ITGB3 UTP18 chr17 51260926 + ITGB3 chr17 47274419 + Exonic hg38 OV TCGA-04-1514-01A 7 4 Out-of-frame Intra-chr q21.33 q21.32 Oncogene Tumor suppressor gene Seq+ 96434 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIDN-MAP7D1 MIDN chr19 1255694 + MAP7D1 chr1 36177873 + Exonic hg38 OV TCGA-04-1517-01A 56 36 Out-of-frame Inter-chr p13.3 p34.3 Seq+ 96435 ChimerSeq TCGA FAWG TCGA_RNA-Seq EVPL-SRP68 EVPL chr17 76023292 - SRP68 chr17 76045386 - Exonic hg38 OV TCGA-04-1517-01A 29 22 In-Frame Intra-chr q25.1 q25.1 Seq+ 96436 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB40C-RAD51B RAB40C chr16 590433 + RAD51B chr14 68291884 + Exonic hg38 OV TCGA-04-1517-01A 29 20 Out-of-frame Inter-chr p13.3 q24.1 Seq+ 96437 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF2-GON4L ARHGEF2 chr1 155954902 - GON4L chr1 155785374 - Exonic hg38 OV TCGA-04-1517-01A 27 3 In-Frame Intra-chr q22 q22 Seq+ 96438 ChimerSeq TCGA FAWG TCGA_RNA-Seq THRAP3-STK11 THRAP3 chr1 36224505 + STK11 chr19 1218417 + Exonic hg38 OV TCGA-04-1517-01A 20 9 5'UTR-CDS Inter-chr p34.3 p13.3 Oncogene Tumor suppressor gene Seq+ 96439 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR66-JUP WDR66 chr12 121962162 + JUP chr17 41756214 - Exonic hg38 OV TCGA-04-1517-01A 16 9 Out-of-frame Inter-chr q24.31 q21.2 Tumor suppressor gene Seq+ 96440 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB2-CKB GRB2 chr17 75393551 - CKB chr14 103522505 - Exonic hg38 OV TCGA-04-1517-01A 12 9 CDS-5'UTR Inter-chr q25.1 q32.33 Seq+ 96441 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCNN1A-PKNOX1 SCNN1A chr12 6374368 - PKNOX1 chr21 43004326 + Exonic hg38 OV TCGA-04-1517-01A 10 13 CDS-5'UTR Inter-chr p13.31 q22.3 Tumor suppressor gene Transcription factor Seq+ 96442 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K6-AHDC1 MAP3K6 chr1 27363917 - AHDC1 chr1 27534916 - Exonic hg38 OV TCGA-04-1517-01A 9 13 CDS-3'UTR Intra-chr p36.11 STE:STE11 p35.3 Transcription factor Seq+ 96443 ChimerSeq TCGA FAWG TCGA_RNA-Seq GS1-MIIP GS1 chr7 66480394 - MIIP chr1 12022095 + Exonic hg38 OV TCGA-04-1517-01A 9 10 Out-of-frame Inter-chr p36.22 96444 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX8-ARL4D DHX8 chr17 43500103 + ARL4D chr17 43399661 + Exonic hg38 OV TCGA-04-1517-01A 8 7 5'UTR-5'UTR Intra-chr q21.31 q21.31 Seq+ 96445 ChimerSeq TCGA FAWG TCGA_RNA-Seq POFUT1-HCK POFUT1 chr20 32208065 + HCK chr20 32083894 + Exonic hg38 OV TCGA-04-1517-01A 5 0 In-Frame Intra-chr q11.21 q11.21 TK:Src Seq+ 96446 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJB1-EPS15L1 DNAJB1 chr19 14518139 - EPS15L1 chr19 16361984 - Exonic hg38 OV TCGA-04-1519-01A 201 157 In-Frame Intra-chr p13.12 Tumor suppressor gene p13.11 Seq+ 96447 ChimerSeq TCGA FAWG TCGA_RNA-Seq TENM4-ZDHHC18 TENM4 chr11 79440509 - ZDHHC18 chr1 26832447 + Exonic hg38 OV TCGA-04-1530-01A 11 1 5'UTR-CDS Inter-chr q14.1 p36.11 Seq+ 96448 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIBP1-SNU13 PPFIBP1 chr12 27650141 + SNU13 chr22 41680364 - Exonic hg38 OV TCGA-04-1536-01A 8 2 In-Frame Inter-chr p11.23 q13.2 96449 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSBP2-SERINC5 SSBP2 chr5 81466974 - SERINC5 chr5 80111702 - Exonic hg38 OV TCGA-04-1542-01A 65 6 CDS-3'UTR Intra-chr q14.1 Tumor suppressor gene q14.1 Seq+ 96450 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCBE1-SKAP1 CCBE1 chr18 59696629 - SKAP1 chr17 48363814 - Exonic hg38 OV TCGA-04-1648-01A 5 8 In-Frame Inter-chr q21.32 q21.32 Seq+ 96451 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD12-CCDC178 ANKRD12 chr18 9136965 + CCDC178 chr18 32974681 - Exonic hg38 OV TCGA-04-1651-01A 53 6 5'UTR-CDS Intra-chr p11.22 q12.1 Seq+ 96452 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRG-BRD8 PTPRG chr3 61748982 + BRD8 chr5 138145878 - Exonic hg38 OV TCGA-04-1651-01A 14 1 Out-of-frame Inter-chr p14.2 q31.2 Seq+ 96453 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDR2L-HID1 CDR2L chr17 74988122 + HID1 chr17 74964632 - Exonic hg38 OV TCGA-09-0364-01A 85 35 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 96454 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCF2L-GRK1 MCF2L chr13 112902371 + GRK1 chr13 113732884 + Exonic hg38 OV TCGA-09-0364-01A 5 12 5'UTR-3'UTR Intra-chr q34 Seq+ 96455 ChimerSeq TCGA FAWG TCGA_RNA-Seq OLFM2-TMEM205 OLFM2 chr19 9936304 - TMEM205 chr19 11345628 - Exonic hg38 OV TCGA-09-0366-01A 221 164 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 96456 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPAMD8-SMIM7 CPAMD8 chr19 16989643 - SMIM7 chr19 16631062 - Exonic hg38 OV TCGA-09-0366-01A 171 58 CDS-3'UTR Intra-chr p13.11 p13.11 Seq+ 96457 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAB2-LRRC32 GAB2 chr11 78417646 - LRRC32 chr11 76665958 - Exonic hg38 OV TCGA-09-0366-01A 118 62 CDS-5'UTR Intra-chr q14.1 q13.5 Seq+ 96458 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEK6-PTGS1 NEK6 chr9 124258085 + PTGS1 chr9 122381371 + Exonic hg38 OV TCGA-09-0366-01A 46 101 5'UTR-CDS Intra-chr q33.3 Other:NEK q33.2 Seq+ 96459 ChimerSeq TCGA FAWG TCGA_RNA-Seq C19orf12-GLYATL2 C19orf12 chr19 29708254 - GLYATL2 chr11 58844524 - Exonic hg38 OV TCGA-09-0366-01A 26 37 5'UTR-5'UTR Inter-chr q12 q12.1 Seq+ 96460 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD33B-SNHG18 ANKRD33B chr5 10564833 + SNHG18 chr5 9548990 + Exonic hg38 OV TCGA-09-0367-01A 239 74 CDS-5'UTR Intra-chr p15.2 p15.31 Seq+ 96461 ChimerSeq TCGA FAWG TCGA_RNA-Seq EYA3-SPCS2P4 EYA3 chr1 28088524 - SPCS2P4 chr1 28095988 - Exonic hg38 OV TCGA-09-0367-01A 37 10 Out-of-frame Intra-chr p35.3 p35.3 Seq+ 96462 ChimerSeq TCGA FAWG TCGA_RNA-Seq MUC16-RNASEH2B MUC16 chr19 8969775 - RNASEH2B chr13 50927407 + Exonic hg38 OV TCGA-09-0367-01A 24 10 In-Frame Inter-chr p13.2 q14.3 Seq+ 96463 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTN4RL2-CTNND1 RTN4RL2 chr11 57468090 + CTNND1 chr11 57794010 + Exonic hg38 OV TCGA-09-0367-01A 19 8 In-Frame Intra-chr q12.1 q12.1 Tumor suppressor gene Seq+ 96464 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF20-NFAM1 TCF20 chr22 42343479 - NFAM1 chr22 42397956 - Exonic hg38 OV TCGA-09-0367-01A 14 9 5'UTR-CDS Intra-chr Transcription factor q13.2 Seq+ 96465 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMD8-C10orf11 SAMD8 chr10 75168658 + C10orf11 chr10 76557209 + Exonic hg38 OV TCGA-09-0367-01A 12 2 Out-of-frame Intra-chr q22.2 Seq+ 96466 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB18-ZNF669 RAB18 chr10 27504437 + ZNF669 chr1 247102113 - Exonic hg38 OV TCGA-09-0367-01A 10 9 Out-of-frame Inter-chr p12.1 q44 Transcription factor Seq+ 96467 ChimerSeq TCGA FAWG TCGA_RNA-Seq WBP2NL-SEPT3 WBP2NL chr22 41998880 + SEPT3 chr22 41992664 + Exonic hg38 OV TCGA-09-0367-01A 4 9 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 96468 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERI2-CRYM ERI2 chr16 20896308 - CRYM chr16 21244068 - Exonic hg38 OV TCGA-09-0369-01A 29 31 Out-of-frame Intra-chr p12.3 Seq+ 96469 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP4R2-AHRR PPP4R2 chr3 72998158 + AHRR chr5 422729 + Exonic hg38 OV TCGA-09-0369-01A 25 2 Out-of-frame Inter-chr p13 p15.33 Tumor suppressor gene Transcription factor Seq+ 96470 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRS-RGS6 PTPRS chr19 5286050 - RGS6 chr14 72352095 + Exonic hg38 OV TCGA-09-0369-01A 21 4 Out-of-frame Inter-chr p13.3 q24.2 Seq+ 96471 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF138-VWC2 RNF138 chr18 32092235 + VWC2 chr7 49802711 + Exonic hg38 OV TCGA-09-0369-01A 14 9 5'UTR-5'UTR Inter-chr q12.1 p12.2 Seq+ 96472 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCUN1D3-CRYM DCUN1D3 chr16 20896308 - CRYM chr16 21244068 - Exonic hg38 OV TCGA-09-0369-01A 11 14 Out-of-frame Intra-chr p12.3 Tumor suppressor gene Seq+ 96473 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK2A1-SNRPB CSNK2A1 chr20 543672 - SNRPB chr20 2467758 - Exonic hg38 OV TCGA-09-0369-01A 2 1 5'UTR-CDS Intra-chr p13 Oncogene p13 Seq+ 96474 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACO2-UBE2A ACO2 chr22 41469182 + UBE2A chrX 119582588 + Exonic hg38 OV TCGA-09-1659-01B 114 8 5'UTR-CDS Inter-chr q13.2 q24 Seq+ 96475 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM222B-C16orf62 FAM222B chr17 28842682 - C16orf62 chr16 19616114 + Exonic hg38 OV TCGA-09-1659-01B 50 14 Out-of-frame Inter-chr q11.2 p12.3 Seq+ 96476 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBLC-NPIPB14P CBLC chr19 44800450 + NPIPB14P chr16 69986509 - Exonic hg38 OV TCGA-09-1659-01B 32 21 Out-of-frame Inter-chr q13.32 q22.1 96477 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBLC-PDXDC2P CBLC chr19 44800450 + PDXDC2P chr16 69986509 - Exonic hg38 OV TCGA-09-1659-01B 32 21 Out-of-frame Inter-chr q13.32 q22.1 Seq+ 96478 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRK-PITPNA CRK chr17 1455877 - PITPNA chr17 1538952 - Exonic hg38 OV TCGA-09-1659-01B 24 9 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 96479 ChimerSeq TCGA FAWG TCGA_RNA-Seq HS2ST1-NXNL2 HS2ST1 chr1 86915160 + NXNL2 chr9 88575087 + Exonic hg38 OV TCGA-09-1659-01B 20 17 CDS-3'UTR Inter-chr p22.3 q22.1 Seq+ 96480 ChimerSeq TCGA FAWG TCGA_RNA-Seq SP3-GPR155 SP3 chr2 173954873 - GPR155 chr2 174453841 - Exonic hg38 OV TCGA-09-1662-01A 37 17 In-Frame Intra-chr q31.1 Transcription factor q31.1 Seq+ 96481 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2D-RHEBL1 KMT2D chr12 49045920 - RHEBL1 chr12 49067035 - Exonic hg38 OV TCGA-09-1662-01A 27 22 In-Frame Intra-chr q13.12 Oncogene q13.12 Seq+ 96482 ChimerSeq TCGA FAWG TCGA_RNA-Seq HK2-ONECUT3 HK2 chr2 74874449 + ONECUT3 chr19 1775153 + Exonic hg38 OV TCGA-09-1662-01A 26 12 Out-of-frame Inter-chr p12 p13.3 Transcription factor Seq+ 96483 ChimerSeq TCGA FAWG TCGA_RNA-Seq STYX-C14orf166 STYX chr14 52730531 + C14orf166 chr14 51991317 + Exonic hg38 OV TCGA-09-1662-01A 13 8 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 96484 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPP-MBNL1 LPP chr3 188341719 + MBNL1 chr3 152414941 + Exonic hg38 OV TCGA-09-1662-01A 12 2 5'UTR-CDS Intra-chr q27.3 Oncogene q25.1 Seq+ 96485 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHL1-RAD18 CHL1 chr3 399148 + RAD18 chr3 8775664 - Exonic hg38 OV TCGA-09-1665-01B 19 13 CDS-3'UTR Intra-chr p26.3 p25.3 Seq+ 96486 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF321P-EVI5L ZNF321P chr19 52942541 - EVI5L chr19 7862972 + Exonic hg38 OV TCGA-09-1665-01B 19 1 3'UTR-CDS Intra-chr q13.41 p13.2 96487 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L4A-REEP5 EPB41L4A chr5 112184016 - REEP5 chr5 112902518 - Exonic hg38 OV TCGA-09-1665-01B 15 6 In-Frame Intra-chr q22.2 q22.2 Seq+ 96488 ChimerSeq TCGA FAWG TCGA_RNA-Seq PFKFB4-TMEM89 PFKFB4 chr3 48550687 - TMEM89 chr3 48621532 - Exonic hg38 OV TCGA-09-1665-01B 14 5 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 96489 ChimerSeq TCGA FAWG TCGA_RNA-Seq NADK2-FOXP1 NADK2 chr5 36227477 - FOXP1 chr3 71198392 - Exonic hg38 OV TCGA-09-1665-01B 13 5 5'UTR-5'UTR Inter-chr p13.2 p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 96490 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNRF3-PREPL ZNRF3 chr22 28884066 + PREPL chr2 44329112 - Exonic hg38 OV TCGA-09-1665-01B 13 2 In-Frame Inter-chr q12.1 p21 Seq+ 96491 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHEK1-EXOC6 CHEK1 chr11 125637544 + EXOC6 chr10 92997474 + Exonic hg38 OV TCGA-09-1665-01B 1 4 Out-of-frame Inter-chr q24.2 Oncogene Tumor suppressor gene q23.33 Seq+ 96492 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTCH2-AGBL2 MTCH2 chr11 47638699 - AGBL2 chr11 47660346 - Exonic hg38 OV TCGA-09-1666-01A 89 6 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 96493 ChimerSeq TCGA FAWG TCGA_RNA-Seq SARNP-KCNN4 SARNP chr12 55817666 - KCNN4 chr19 43776636 - Exonic hg38 OV TCGA-09-1666-01A 25 2 In-Frame Inter-chr q13.2 q13.31 Seq+ 96494 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKNK2-AP3D1 MKNK2 chr19 2050801 - AP3D1 chr19 2102268 - Exonic hg38 OV TCGA-09-1666-01A 15 0 In-Frame Intra-chr p13.3 p13.3 Seq+ 96495 ChimerSeq TCGA FAWG TCGA_RNA-Seq SULF1-RPS29 SULF1 chr8 69600753 + RPS29 chr14 49586049 - Exonic hg38 OV TCGA-09-1667-01C 73 49 Out-of-frame Inter-chr q13.2 q21.3 Seq+ 96496 ChimerSeq TCGA FAWG TCGA_RNA-Seq CERS2-GOLPH3L CERS2 chr1 150968918 - GOLPH3L chr1 150648748 - Exonic hg38 OV TCGA-09-1667-01C 21 12 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 96497 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAM9-CRB1 ADAM9 chr8 38997160 + CRB1 chr1 197328422 + Exonic hg38 OV TCGA-09-1667-01C 14 12 3'UTR-CDS Inter-chr q31.3 Seq+ 96498 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWP1-C8orf34 WWP1 chr8 86430751 + C8orf34 chr8 68776399 + Exonic hg38 OV TCGA-09-1667-01C 14 8 Out-of-frame Intra-chr q21.3 q13.2 Seq+ 96499 ChimerSeq TCGA FAWG TCGA_RNA-Seq JAK1-HSD11B1 JAK1 chr1 64966333 - HSD11B1 chr1 209704917 + Exonic hg38 OV TCGA-09-1667-01C 11 4 5'UTR-5'UTR Intra-chr p31.3 TK:JakA Oncogene q32.2 Seq+ 96500 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUDCD1-OR10J1 NUDCD1 chr8 109271005 - OR10J1 chr1 159439776 + Exonic hg38 OV TCGA-09-1667-01C 8 5 CDS-5'UTR Inter-chr q23.1 q23.2 Seq+ 96501 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIMS4-AKAP10 RIMS4 chr20 44810175 - AKAP10 chr17 19968461 - Exonic hg38 OV TCGA-09-1667-01C 7 5 In-Frame Inter-chr q13.12 p11.2 Seq+ 96502 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHPS-CACNA1A DHPS chr19 12681560 - CACNA1A chr19 13214608 - Exonic hg38 OV TCGA-09-1667-01C 7 1 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 96503 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATAD2A-ZNF93 GATAD2A chr19 19406019 + ZNF93 chr19 19933182 + Exonic hg38 OV TCGA-09-1667-01C 3 5 5'UTR-CDS Intra-chr p13.11 Transcription factor p12 Transcription factor Seq+ 96504 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOOK2-MAST1 HOOK2 chr19 12770932 - MAST1 chr19 12847848 + Exonic hg38 OV TCGA-09-1668-01B 15 12 Out-of-frame Intra-chr p13.13 p13.13 AGC:MAST Seq+ 96505 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASA2-SUCNR1 RASA2 chr3 141516431 + SUCNR1 chr3 151879852 + Exonic hg38 OV TCGA-09-1669-01A 56 24 CDS-5'UTR Intra-chr q23 q25.1 Seq+ 96506 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK1-KCTD21 PAK1 chr11 77355668 - KCTD21 chr11 78174583 - Exonic hg38 OV TCGA-09-1669-01A 6 5 CDS-5'UTR Intra-chr q14.1 STE:STE20 q14.1 Seq+ 96507 ChimerSeq TCGA FAWG TCGA_RNA-Seq MUC16-SBNO2 MUC16 chr19 8858204 - SBNO2 chr19 1127765 - Exonic hg38 OV TCGA-09-1670-01A 17 0 CDS-5'UTR Intra-chr p13.2 p13.3 Seq+ 96508 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCCA-MBNL2 PCCA chr13 100209463 + MBNL2 chr13 97334276 + Exonic hg38 OV TCGA-09-1673-01A 36 21 In-Frame Intra-chr q32.3 q32.1 Transcription factor Seq+ 96509 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2A2-CASC18 ATP2A2 chr12 110282795 + CASC18 chr12 105737256 + Exonic hg38 OV TCGA-09-1673-01A 22 18 CDS-5'UTR Intra-chr q24.11 q23.3 96510 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSBN1L-RHBDD2 RSBN1L chr7 77697055 + RHBDD2 chr7 75881829 + Exonic hg38 OV TCGA-09-1673-01A 21 20 In-Frame Intra-chr q11.23 q11.23 Seq+ 96511 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARD3-ARHGAP24 PARD3 chr10 34516979 - ARHGAP24 chr4 85570522 + Exonic hg38 OV TCGA-09-1673-01A 21 11 CDS-5'UTR Inter-chr p11.21 q21.23 Seq+ 96512 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALBP1-RAB31 RALBP1 chr18 9475691 + RAB31 chr18 9775278 + Exonic hg38 OV TCGA-09-1673-01A 18 23 5'UTR-CDS Intra-chr p11.22 p11.22 Seq+ 96513 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD6-NCOA5 CHD6 chr20 41618340 - NCOA5 chr20 46062889 - Exonic hg38 OV TCGA-09-1673-01A 22 5 5'UTR-CDS Intra-chr q12 q13.12 Tumor suppressor gene Seq+ 96514 ChimerSeq TCGA FAWG TCGA_RNA-Seq CORO1C-ATXN2 CORO1C chr12 108701124 - ATXN2 chr12 111488780 - Exonic hg38 OV TCGA-09-1673-01A 19 12 In-Frame Intra-chr q24.11 q24.12 Seq+ 96515 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCTD21-NARS2 KCTD21 chr11 78188573 - NARS2 chr11 78443758 - Exonic hg38 OV TCGA-09-1673-01A 20 5 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 96516 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF512-KCNK3 ZNF512 chr2 27617571 + KCNK3 chr2 26727667 + Exonic hg38 OV TCGA-09-1673-01A 17 11 Out-of-frame Intra-chr p23.3 Transcription factor p23.3 Seq+ 96517 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPECC1L-TMEM62 SPECC1L chr22 24347176 + TMEM62 chr15 43169593 + Exonic hg38 OV TCGA-09-1673-01A 14 16 Out-of-frame Inter-chr q11.23 q15.2 Seq+ 96518 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK12-SMG6 CDK12 chr17 39501439 + SMG6 chr17 2081956 - Exonic hg38 OV TCGA-09-1673-01A 12 16 Out-of-frame Intra-chr q12 Oncogene p13.3 Seq+ 96519 ChimerSeq TCGA FAWG TCGA_RNA-Seq UHRF1BP1-HCG22 UHRF1BP1 chr6 34792294 + HCG22 chr6 31055710 + Exonic hg38 OV TCGA-09-1673-01A 12 14 CDS-3'UTR Intra-chr p21.31 Seq+ 96520 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADD2-ANTXR1 ADD2 chr2 70767886 - ANTXR1 chr2 69102842 + Exonic hg38 OV TCGA-09-1673-01A 13 6 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 96521 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL14-CCDC178 KLHL14 chr18 32680169 - CCDC178 chr18 32974681 - Exonic hg38 OV TCGA-09-1673-01A 9 12 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 96522 ChimerSeq TCGA FAWG TCGA_RNA-Seq FARP1-IPO5 FARP1 chr13 98368195 + IPO5 chr13 97969723 + Exonic hg38 OV TCGA-09-1673-01A 7 18 CDS-5'UTR Intra-chr q32.2 q32.2 96523 ChimerSeq TCGA FAWG TCGA_RNA-Seq ECE1-SRSF10 ECE1 chr1 21247221 - SRSF10 chr1 23978817 - Exonic hg38 OV TCGA-09-1673-01A 8 9 In-Frame Intra-chr p36.12 p36.11 Seq+ 96524 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC1-PTPRU HDAC1 chr1 32302733 + PTPRU chr1 29255275 + Exonic hg38 OV TCGA-09-1673-01A 7 6 Out-of-frame Intra-chr p35.2 Tumor suppressor gene p35.3 Seq+ 96525 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF428-ETHE1 ZNF428 chr19 43619558 - ETHE1 chr19 43511566 - Exonic hg38 OV TCGA-09-1674-01A 51 7 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.31 Seq+ 96526 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHACTR4-SCMH1 PHACTR4 chr1 28369825 + SCMH1 chr1 41075451 - Exonic hg38 OV TCGA-09-1674-01A 32 8 5'UTR-CDS Intra-chr p35.3 Tumor suppressor gene p34.2 Transcription factor Seq+ 96527 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF420-SIPA1L3 ZNF420 chr19 37091121 + SIPA1L3 chr19 38099962 + Exonic hg38 OV TCGA-09-1674-01A 14 2 Out-of-frame Intra-chr q13.12 Transcription factor q13.13 Seq+ 96528 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCT7-ALMS1 CCT7 chr2 73234384 + ALMS1 chr2 73489634 + Exonic hg38 OV TCGA-09-1674-01A 13 2 In-Frame Intra-chr p13.2 p13.1 Seq+ 96529 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPICE1-MORC1 SPICE1 chr3 113488945 - MORC1 chr3 108971402 - Exonic hg38 OV TCGA-09-2044-01B 65 13 In-Frame Intra-chr q13.2 q13.13 Seq+ 96530 ChimerSeq TCGA FAWG TCGA_RNA-Seq KPNA6-TMEM39B KPNA6 chr1 32108134 + TMEM39B chr1 32074951 + Exonic hg38 OV TCGA-09-2044-01B 50 8 In-Frame Intra-chr p35.2 p35.2 Seq+ 96531 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNK1-EIF3G WNK1 chr12 830160 + EIF3G chr19 10119700 - Exonic hg38 OV TCGA-09-2044-01B 20 11 Out-of-frame Inter-chr p13.33 p13.2 Seq+ 96532 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUMO3-FAM83E SUMO3 chr21 44813976 - FAM83E chr19 48603911 - Exonic hg38 OV TCGA-09-2044-01B 20 3 Out-of-frame Inter-chr q22.3 q13.33 Seq+ 96533 ChimerSeq TCGA FAWG TCGA_RNA-Seq THOC5-ASCC2 THOC5 chr22 29543429 - ASCC2 chr22 29816073 - Exonic hg38 OV TCGA-09-2044-01B 16 0 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 96534 ChimerSeq TCGA FAWG TCGA_RNA-Seq E2F6-STK36 E2F6 chr2 11465772 - STK36 chr2 218680603 + Exonic hg38 OV TCGA-09-2044-01B 10 7 Out-of-frame Intra-chr p25.1 Transcription factor q35 Oncogene Seq+ 96535 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC4-TRUB2 EXOC4 chr7 133480138 + TRUB2 chr9 128317226 - Exonic hg38 OV TCGA-09-2045-01A 12 2 In-Frame Inter-chr q33 q34.11 Seq+ 96536 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOX6-ARV1 SOX6 chr11 16183886 - ARV1 chr1 230988320 + Exonic hg38 OV TCGA-09-2045-01A 6 0 In-Frame Inter-chr p15.2 Transcription factor q42.2 Seq+ 96537 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRIK5-HECTD4 GRIK5 chr19 42053602 - HECTD4 chr12 112244009 - Exonic hg38 OV TCGA-09-2045-01A 3 2 Out-of-frame Inter-chr q13.2 q24.13 Seq+ 96538 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2CD3-SYTL1 C2CD3 chr11 74138720 - SYTL1 chr1 27345297 + Exonic hg38 OV TCGA-09-2048-01A 34 5 CDS-5'UTR Inter-chr q13.4 p36.11 Seq+ 96539 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPOT-C12orf56 XPOT chr12 64410095 + C12orf56 chr12 64353056 - Exonic hg38 OV TCGA-09-2051-01A 66 10 In-Frame Intra-chr q14.2 q14.2 Seq+ 96540 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPIDR-TGFB1 SPIDR chr8 47294030 + TGFB1 chr19 41332281 - Exonic hg38 OV TCGA-09-2051-01A 61 7 In-Frame Inter-chr q11.21 q13.2 Tumor suppressor gene Seq+ 96541 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC85A-EYA2 CCDC85A chr2 56342955 + EYA2 chr20 47143059 + Exonic hg38 OV TCGA-09-2051-01A 20 0 In-Frame Inter-chr p16.1 q13.12 Seq+ 96542 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTX4-MS4A1 DTX4 chr11 59182462 + MS4A1 chr11 60462359 + Exonic hg38 OV TCGA-09-2051-01A 13 3 CDS-5'UTR Intra-chr q12.1 q12.2 Seq+ 96543 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBED8-SLU7 ZBED8 chr5 160399639 - SLU7 chr5 160403464 - Exonic hg38 OV TCGA-09-2053-01C 24 2 5'UTR-CDS Intra-chr q33.3 q33.3 96544 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF567-GADD45GIP1 ZNF567 chr19 36689497 + GADD45GIP1 chr19 12954526 - Exonic hg38 OV TCGA-09-2054-01A 39 9 5'UTR-CDS Intra-chr q13.12 Transcription factor p13.13 Tumor suppressor gene Seq+ 96545 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRG2-MAP3K15 ADGRG2 chrX 19068717 - MAP3K15 chrX 19400663 - Exonic hg38 OV TCGA-09-2054-01A 21 7 Out-of-frame Intra-chr p22.13 p22.12 96546 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIMM44-DAND5 TIMM44 chr19 7943607 - DAND5 chr19 12973389 + Exonic hg38 OV TCGA-09-2054-01A 13 2 In-Frame Intra-chr p13.2 p13.13 Seq+ 96547 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIMM29-PDE4A TIMM29 chr19 10929597 + PDE4A chr19 10463793 + Exonic hg38 OV TCGA-09-2054-01A 9 4 In-Frame Intra-chr p13.2 p13.2 96548 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOCAD-FBXO10 FOCAD chr9 20885230 + FBXO10 chr9 37529260 - Exonic hg38 OV TCGA-09-2054-01A 7 0 In-Frame Intra-chr p21.3 p13.2 Seq+ 96549 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF727-STRIP2 ZNF727 chr7 64069609 + STRIP2 chr7 129440022 + Exonic hg38 OV TCGA-09-2054-01A 5 2 Out-of-frame Intra-chr q11.21 Transcription factor q32.1 Seq+ 96550 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNPO-NFYC SYNPO chr5 150624907 + NFYC chr1 40762888 + Exonic hg38 OV TCGA-09-2054-01A 4 4 5'UTR-CDS Inter-chr q33.1 p34.2 Transcription factor Seq+ 96551 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITPK1-GON7 ITPK1 chr14 93115069 - GON7 chr14 93203782 - Exonic hg38 OV TCGA-09-2054-01A 4 1 5'UTR-5'UTR Intra-chr 96552 ChimerSeq TCGA FAWG TCGA_RNA-Seq MINDY1-POGZ MINDY1 chr1 151001250 - POGZ chr1 151408828 - Exonic hg38 OV TCGA-09-2054-01A 2 4 In-Frame Intra-chr q21.3 q21.3 96553 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD11-TBCD ANKRD11 chr16 89418284 - TBCD chr17 82870224 + Exonic hg38 OV TCGA-09-2056-01B 95 12 5'UTR-5'UTR Inter-chr q24.3 Seq+ 96554 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHMP1A-VPS9D1 CHMP1A chr16 89651262 - VPS9D1 chr16 89708956 - Exonic hg38 OV TCGA-09-2056-01B 72 4 3'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 96555 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNRNP70-TIMM44 SNRNP70 chr19 49086561 + TIMM44 chr19 7941197 - Exonic hg38 OV TCGA-10-0926-01A 70 9 In-Frame Intra-chr q13.33 p13.2 Seq+ 96556 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4B-MPND KDM4B chr19 5082504 + MPND chr19 4345745 + Exonic hg38 OV TCGA-10-0926-01A 26 15 In-Frame Intra-chr p13.3 p13.3 Seq+ 96557 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB11B-GEMIN7 RAB11B chr19 8390456 + GEMIN7 chr19 45090107 + Exonic hg38 OV TCGA-10-0926-01A 9 14 CDS-5'UTR Intra-chr p13.2 q13.32 Seq+ 96558 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK4-LSM4 PAK4 chr19 39125919 + LSM4 chr19 18316065 - Exonic hg38 OV TCGA-10-0927-01A 20 50 5'UTR-CDS Intra-chr q13.2 STE:STE20 p13.11 Seq+ 96559 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXTL3-PNOC EXTL3 chr8 28622810 + PNOC chr8 28329135 + Exonic hg38 OV TCGA-10-0927-01A 28 4 5'UTR-5'UTR Intra-chr p21.1 Tumor suppressor gene p21.1 Seq+ 96560 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAPGEF6-POU4F3 RAPGEF6 chr5 131634962 - POU4F3 chr5 146339103 + Exonic hg38 OV TCGA-10-0927-01A 9 3 CDS-5'UTR Intra-chr q31.1 q32 Transcription factor Seq+ 96561 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPOP-SLC35B1 SPOP chr17 49677933 - SLC35B1 chr17 49706334 - Exonic hg38 OV TCGA-10-0928-01A 70 24 5'UTR-CDS Intra-chr q21.33 Oncogene Tumor suppressor gene q21.33 Seq+ 96562 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAX8-ZNF512 PAX8 chr2 113278370 - ZNF512 chr2 27598067 + Exonic hg38 OV TCGA-10-0928-01A 58 10 Out-of-frame Intra-chr q14.1 Oncogene Transcription factor p23.3 Transcription factor Seq+ 96563 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRJ-TAF3 PTPRJ chr11 48156119 + TAF3 chr10 7963920 + Exonic hg38 OV TCGA-10-0928-01A 14 5 Out-of-frame Inter-chr p11.2 Tumor suppressor gene p14 Seq+ 96564 ChimerSeq TCGA FAWG TCGA_RNA-Seq LSM2-HSPA1L LSM2 chr6 31806075 - HSPA1L chr6 31811985 - Exonic hg38 OV TCGA-10-0928-01A 12 8 5'UTR-5'UTR Intra-chr Seq+ 96565 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYRIP-S100A2 MYRIP chr3 40044271 + S100A2 chr1 153563887 - Exonic hg38 OV TCGA-10-0928-01A 8 4 5'UTR-5'UTR Inter-chr p22.1 q21.3 Tumor suppressor gene Seq+ 96566 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUCLA2-CTTNBP2NL SUCLA2 chr13 48001180 - CTTNBP2NL chr1 112448942 + Exonic hg38 OV TCGA-10-0928-01A 8 3 In-Frame Inter-chr q14.2 p13.2 Seq+ 96567 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTTNBP2NL-SUCLA2 CTTNBP2NL chr1 112416264 + SUCLA2 chr13 47997023 - Exonic hg38 OV TCGA-10-0928-01A 6 1 In-Frame Inter-chr p13.2 q14.2 Seq+ 96568 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL32-WNT7A RPL32 chr3 12839349 - WNT7A chr3 13854803 - Exonic hg38 OV TCGA-10-0934-01A 143 70 Out-of-frame Intra-chr p25.2 p25.1 Tumor suppressor gene Seq+ 96569 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXNDC11-GSPT1 TXNDC11 chr16 11742477 - GSPT1 chr16 11886931 - Exonic hg38 OV TCGA-10-0934-01A 95 51 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 96570 ChimerSeq TCGA FAWG TCGA_RNA-Seq NECAP2-PCBP1 NECAP2 chr1 16456944 + PCBP1 chr2 70087637 + Exonic hg38 OV TCGA-10-0934-01A 79 38 Out-of-frame Inter-chr p36.13 p13.3 Seq+ 96571 ChimerSeq TCGA FAWG TCGA_RNA-Seq WBP1L-HOXC8 WBP1L chr10 102744107 + HOXC8 chr12 54009598 + Exonic hg38 OV TCGA-10-0934-01A 72 30 Out-of-frame Inter-chr q24.32 q13.13 Transcription factor Seq+ 96572 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB11FIP5-UBE2E3 RAB11FIP5 chr2 73075993 - UBE2E3 chr2 181060665 + Exonic hg38 OV TCGA-10-0934-01A 69 19 In-Frame Intra-chr p13.2 q31.3 Seq+ 96573 ChimerSeq TCGA FAWG TCGA_RNA-Seq MECOM-LMAN2L MECOM chr3 169663336 - LMAN2L chr2 96734526 - Exonic hg38 OV TCGA-10-0934-01A 25 15 Out-of-frame Inter-chr q26.2 Transcription factor q11.2 Seq+ 96574 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZCCHC7-PRSS3 ZCCHC7 chr9 37302231 + PRSS3 chr9 33797829 + Exonic hg38 OV TCGA-10-0934-01A 24 3 Out-of-frame Intra-chr p13.2 p13.3 Seq+ 96575 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL32P3-EFCAB12 RPL32P3 chr3 129399008 - EFCAB12 chr3 129421803 - Exonic hg38 OV TCGA-10-0934-01A 23 5 3'UTR-CDS Intra-chr q21.3 q21.3 Seq+ 96576 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-COQ6 PVT1 chr8 127794734 + COQ6 chr14 73953435 + Exonic hg38 OV TCGA-10-0934-01A 17 7 5'UTR-CDS Inter-chr q24.21 q24.3 Seq+ 96577 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFAF6-BCAS4 NDUFAF6 chr8 94958179 + BCAS4 chr20 50876486 + Exonic hg38 OV TCGA-10-0937-01A 10 5 5'UTR-CDS Inter-chr q22.1 q13.13 Seq+ 96578 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLBP-TMEM129 SLBP chr4 1711874 - TMEM129 chr4 1718626 - Exonic hg38 OV TCGA-10-0937-01A 9 6 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 96579 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMIM13-C7orf49 SMIM13 chr6 11094389 + C7orf49 chr7 135094582 - Exonic hg38 OV TCGA-10-0937-01A 5 1 Out-of-frame Inter-chr p24.2 q33 Seq+ 96580 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCHSD2-TCIRG1 FCHSD2 chr11 73083696 - TCIRG1 chr11 68039036 + Exonic hg38 OV TCGA-10-0938-01A 236 101 Out-of-frame Intra-chr q13.4 q13.2 Seq+ 96581 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDRG1-OC90 NDRG1 chr8 133280231 - OC90 chr8 132024775 - Exonic hg38 OV TCGA-10-0938-01A 52 33 Out-of-frame Intra-chr q24.22 Tumor suppressor gene q24.22 Seq+ 96582 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL48-CHKA MRPL48 chr11 73808350 + CHKA chr11 68089880 - Exonic hg38 OV TCGA-10-0938-01A 8 2 5'UTR-5'UTR Intra-chr q13.4 q13.2 Seq+ 96583 ChimerSeq TCGA FAWG TCGA_RNA-Seq SORL1-CNTN5 SORL1 chr11 121522989 + CNTN5 chr11 99819544 + Exonic hg38 OV TCGA-10-0938-01A 5 2 Out-of-frame Intra-chr q24.1 q22.1 96584 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-TPMT NF1 chr17 31095369 + TPMT chr6 18149171 - Exonic hg38 OV TCGA-13-0714-01A 13 4 CDS-5'UTR Inter-chr q11.2 Oncogene Tumor suppressor gene p22.3 Seq+ 96585 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAF3-IFNL1 TRAF3 chr14 102777675 + IFNL1 chr19 39296805 + Exonic hg38 OV TCGA-13-0724-01A 17 2 5'UTR-CDS Inter-chr q32.32 q13.2 Seq+ 96586 ChimerSeq TCGA FAWG TCGA_RNA-Seq UACA-ANKRD13D UACA chr15 70695017 - ANKRD13D chr11 67290078 + Exonic hg38 OV TCGA-13-0724-01A 5 2 Out-of-frame Inter-chr q23 q13.2 96587 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD2-KLF16 BTBD2 chr19 2015297 - KLF16 chr19 1854760 - Exonic hg38 OV TCGA-13-0726-01A 17 14 Out-of-frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 96588 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK2A1-SNRPB CSNK2A1 chr20 543672 - SNRPB chr20 2467758 - Exonic hg38 OV TCGA-13-0727-01A 68 30 5'UTR-CDS Intra-chr p13 Oncogene p13 Seq+ 96589 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTD1-SEC23B DTD1 chr20 18567596 + SEC23B chr20 18560651 + Exonic hg38 OV TCGA-13-0727-01A 53 4 5'UTR-CDS Intra-chr p11.23 p11.23 96590 ChimerSeq TCGA FAWG TCGA_RNA-Seq DMTN-NPM2 DMTN chr8 22073835 + NPM2 chr8 22033130 + Exonic hg38 OV TCGA-13-0730-01A 7 1 Out-of-frame Intra-chr p21.3 p21.3 Seq+ 96591 ChimerSeq TCGA FAWG TCGA_RNA-Seq TKT-GPBP1 TKT chr3 53240251 - GPBP1 chr5 57261180 + Exonic hg38 OV TCGA-13-0762-01A 26 10 In-Frame Inter-chr p21.1 Tumor suppressor gene q11.2 Transcription factor Seq+ 96592 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC6A-LCMT1 TNRC6A chr16 24730300 + LCMT1 chr16 25128475 + Exonic hg38 OV TCGA-13-0765-01A 18 22 In-Frame Intra-chr p12.1 p12.1 Seq+ 96593 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM122B-PHYKPL FAM122B chrX 134789223 - PHYKPL chr5 178214885 - Exonic hg38 OV TCGA-13-0766-01A 15 2 In-Frame Inter-chr q26.3 q35.3 Seq+ 96594 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNLRB1-ITCH DYNLRB1 chr20 34534795 + ITCH chr20 34504331 + Exonic hg38 OV TCGA-13-0766-01A 13 5 In-Frame Intra-chr q11.22 q11.22 Seq+ 96595 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF1-CD79A ARHGEF1 chr19 41883289 + CD79A chr19 41878990 + Exonic hg38 OV TCGA-13-0766-01A 3 21 5'UTR-CDS Intra-chr q13.2 q13.2 Oncogene Seq+ 96596 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D22A-TTC38 TBC1D22A chr22 46797620 + TTC38 chr22 46292791 + Exonic hg38 OV TCGA-13-0766-01A 3 2 Out-of-frame Intra-chr q13.31 q13.31 96597 ChimerSeq TCGA FAWG TCGA_RNA-Seq URI1-FAM156A URI1 chr19 29986417 + FAM156A chrX 52926617 - Exonic hg38 OV TCGA-13-0768-01A 97 14 CDS-3'UTR Inter-chr q12 p11.22 96598 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR82-ARHGAP39 WDR82 chr3 52278201 - ARHGAP39 chr8 144534202 - Exonic hg38 OV TCGA-13-0768-01A 42 5 Out-of-frame Inter-chr p21.2 q24.3 Seq+ 96599 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKL1-MCHR1 MKL1 chr22 40594674 - MCHR1 chr22 40679217 + Exonic hg38 OV TCGA-13-0768-01A 32 16 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 96600 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHERP-CPAMD8 CHERP chr19 16541870 - CPAMD8 chr19 16907117 - Exonic hg38 OV TCGA-13-0768-01A 12 4 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 96601 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADSL-MKL1 ADSL chr22 40354327 + MKL1 chr22 40411907 - Exonic hg38 OV TCGA-13-0768-01A 8 4 Out-of-frame Intra-chr q13.1 q13.2 Seq+ 96602 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELMSAN1-MKL1 ELMSAN1 chr14 73787102 - MKL1 chr22 40411907 - Exonic hg38 OV TCGA-13-0768-01A 5 5 Out-of-frame Inter-chr q24.3 q13.2 Seq+ 96603 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF799-WDR83OS ZNF799 chr19 12401068 - WDR83OS chr19 12670297 - Exonic hg38 OV TCGA-13-0768-01A 5 4 5'UTR-5'UTR Intra-chr p13.2 Transcription factor p13.13 Seq+ 96604 ChimerSeq TCGA FAWG TCGA_RNA-Seq SWI5-RINT1 SWI5 chr9 128286033 + RINT1 chr7 105567119 + Exonic hg38 OV TCGA-13-0797-01A 58 19 Out-of-frame Inter-chr q34.11 q22.3 Tumor suppressor gene Seq+ 96605 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLF3-FAM114A1 KLF3 chr4 38680682 + FAM114A1 chr4 38922770 + Exonic hg38 OV TCGA-13-0797-01A 42 10 In-Frame Intra-chr p14 Transcription factor p14 Seq+ 96606 ChimerSeq TCGA FAWG TCGA_RNA-Seq DEDD2-LIPE DEDD2 chr19 42209699 - LIPE chr19 42408116 - Exonic hg38 OV TCGA-13-0797-01A 11 5 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 96607 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITM2B-MATR3 ITM2B chr13 48233477 + MATR3 chr5 139329345 + Exonic hg38 OV TCGA-13-0799-01A 365 77 In-Frame Inter-chr q14.2 q31.2 Seq+ 96608 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP350-TDRD5 CEP350 chr1 180041248 + TDRD5 chr1 179690696 + Exonic hg38 OV TCGA-13-0799-01A 35 11 Out-of-frame Intra-chr q25.2 q25.2 Seq+ 96609 ChimerSeq TCGA FAWG TCGA_RNA-Seq FKBP8-DAND5 FKBP8 chr19 18543485 - DAND5 chr19 12973390 + Exonic hg38 OV TCGA-13-0800-01A 87 36 Out-of-frame Intra-chr p13.11 p13.13 Seq+ 96610 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF227-PDCD5 ZNF227 chr19 44212585 + PDCD5 chr19 32582195 + Exonic hg38 OV TCGA-13-0800-01A 44 0 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.11 Tumor suppressor gene Seq+ 96611 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNPO2-ASNA1 TNPO2 chr19 12723249 - ASNA1 chr19 12747197 + Exonic hg38 OV TCGA-13-0800-01A 31 19 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 96612 ChimerSeq TCGA FAWG TCGA_RNA-Seq AK9-PDSS2 AK9 chr6 109690472 - PDSS2 chr6 107274227 - Exonic hg38 OV TCGA-13-0800-01A 24 4 5'UTR-CDS Intra-chr q21 q21 Tumor suppressor gene Seq+ 96613 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL54-TJP3 MRPL54 chr19 3767386 + TJP3 chr19 3750138 + Exonic hg38 OV TCGA-13-0801-01A 104 23 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 96614 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN31-OS9 TSPAN31 chr12 57749216 + OS9 chr12 57715760 + Exonic hg38 OV TCGA-13-0801-01A 56 16 3'UTR-CDS Intra-chr q14.1 q13.3 Seq+ 96615 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFX1-CCDC107 RFX1 chr19 13993525 - CCDC107 chr9 35658576 + Exonic hg38 OV TCGA-13-0801-01A 46 23 In-Frame Inter-chr p13.12 Transcription factor p13.3 Seq+ 96616 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4-LRRC43 MAP4 chr3 48088773 - LRRC43 chr12 122190130 + Exonic hg38 OV TCGA-13-0801-01A 40 12 5'UTR-CDS Inter-chr p21.31 q24.31 Seq+ 96617 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM3A-LTBP1 KDM3A chr2 86466883 + LTBP1 chr2 33389184 + Exonic hg38 OV TCGA-13-0801-01A 41 5 In-Frame Intra-chr p11.2 Tumor suppressor gene p22.3 Seq+ 96618 ChimerSeq TCGA FAWG TCGA_RNA-Seq MECOM-LRRC31 MECOM chr3 169663336 - LRRC31 chr3 169869872 - Exonic hg38 OV TCGA-13-0801-01A 25 3 5'UTR-5'UTR Intra-chr q26.2 Transcription factor q26.2 Seq+ 96619 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOT1L-OAZ1 DOT1L chr19 2164265 + OAZ1 chr19 2271782 + Exonic hg38 OV TCGA-13-0801-01A 23 6 In-Frame Intra-chr p13.3 Oncogene Transcription factor p13.3 Seq+ 96620 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHCHD3-BDH1 CHCHD3 chr7 133024546 - BDH1 chr3 197522781 - Exonic hg38 OV TCGA-13-0801-01A 21 1 3'UTR-3'UTR Inter-chr q33 Transcription factor Seq+ 96621 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAST2-CLDN14 MAST2 chr1 45829581 + CLDN14 chr21 36510500 - Exonic hg38 OV TCGA-13-0801-01A 17 9 CDS-5'UTR Inter-chr p34.1 AGC:MAST q22.13 Seq+ 96622 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNKS-KHDRBS3 TNKS chr8 9764790 + KHDRBS3 chr8 135606955 + Exonic hg38 OV TCGA-13-0884-01B 19 9 5'UTR-CDS Intra-chr p23.1 q24.23 Seq+ 96623 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT1-HERPUD1 CNOT1 chr16 58629728 - HERPUD1 chr16 56943982 + Exonic hg38 OV TCGA-13-0885-01A 19 17 3'UTR-3'UTR Intra-chr q21 q13 96624 ChimerSeq TCGA FAWG TCGA_RNA-Seq EDC3-COX5A EDC3 chr15 74674961 - COX5A chr15 74938036 - Exonic hg38 OV TCGA-13-0885-01A 20 7 5'UTR-5'UTR Intra-chr q24.1 q24.2 Seq+ 96625 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT1-CETP CNOT1 chr16 58629728 - CETP chr16 56969386 + Exonic hg38 OV TCGA-13-0885-01A 20 3 5'UTR-CDS Intra-chr q21 q13 Seq+ 96626 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP3-PTTG1 SRGAP3 chr3 9248885 - PTTG1 chr5 160422302 + Exonic hg38 OV TCGA-13-0885-01A 19 5 CDS-5'UTR Inter-chr p25.3 Tumor suppressor gene q33.3 Seq+ 96627 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIMA1-RGL1 LIMA1 chr12 50283420 - RGL1 chr1 183880616 + Exonic hg38 OV TCGA-13-0888-01A 14 6 5'UTR-CDS Inter-chr q13.12 Tumor suppressor gene q25.3 Seq+ 96628 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXJ3-SVBP FOXJ3 chr1 42335059 - SVBP chr1 42816580 - Exonic hg38 OV TCGA-13-0890-01A 114 21 5'UTR-5'UTR Intra-chr p34.2 Transcription factor p34.2 96629 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM201-RBP7 TMEM201 chr1 9597053 + RBP7 chr1 10015782 + Exonic hg38 OV TCGA-13-0890-01A 12 6 In-Frame Intra-chr p36.22 p36.22 Seq+ 96630 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK13-POU6F2 CDK13 chr7 39951852 + POU6F2 chr7 39433077 + Exonic hg38 OV TCGA-13-0890-01A 2 6 Out-of-frame Intra-chr p14.1 p14.1 Tumor suppressor gene Transcription factor Seq+ 96631 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC20B-DHX29 CDC20B chr5 55172588 - DHX29 chr5 55256540 - Exonic hg38 OV TCGA-13-0893-01B 86 40 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 96632 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC10-GRID1 TRAPPC10 chr21 44012560 + GRID1 chr10 85869180 - Exonic hg38 OV TCGA-13-0893-01B 58 6 Out-of-frame Inter-chr q22.3 q23.2 Seq+ 96633 ChimerSeq TCGA FAWG TCGA_RNA-Seq PXK-RPP14 PXK chr3 58333090 + RPP14 chr3 58310309 + Exonic hg38 OV TCGA-13-0893-01B 39 11 5'UTR-5'UTR Intra-chr p14.3 p14.3 Seq+ 96634 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC39C-CABLES1 TTC39C chr18 24015038 + CABLES1 chr18 23257227 + Exonic hg38 OV TCGA-13-0893-01B 26 4 Out-of-frame Intra-chr q11.2 q11.2 Tumor suppressor gene Seq+ 96635 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2D-LMBR1L KMT2D chr12 49045920 - LMBR1L chr12 49107045 - Exonic hg38 OV TCGA-13-0893-01B 24 5 Out-of-frame Intra-chr q13.12 Oncogene q13.12 Seq+ 96636 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOB3C-ATPAF1 MOB3C chr1 46616711 - ATPAF1 chr1 46665364 - Exonic hg38 OV TCGA-13-0893-01B 15 11 5'UTR-5'UTR Intra-chr p33 p33 Seq+ 96637 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAPER-LINGO1 SCAPER chr15 76883812 - LINGO1 chr15 77615900 - Exonic hg38 OV TCGA-13-0893-01B 15 7 In-Frame Intra-chr q24.3 q24.3 Seq+ 96638 ChimerSeq TCGA FAWG TCGA_RNA-Seq UIMC1-LILRB1 UIMC1 chr5 176982469 - LILRB1 chr19 54631026 + Exonic hg38 OV TCGA-13-0893-01B 15 4 3'UTR-3'UTR Inter-chr q35.2 Tumor suppressor gene Seq+ 96639 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMB3-CISD3 PSMB3 chr17 38762505 + CISD3 chr17 38731320 + Exonic hg38 OV TCGA-13-0893-01B 12 4 3'UTR-3'UTR Intra-chr Seq+ 96640 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF7IP2-IQCK ATF7IP2 chr16 10440462 + IQCK chr16 19763848 + Exonic hg38 OV TCGA-13-0893-01B 7 5 In-Frame Intra-chr p13.2 p12.3 Seq+ 96641 ChimerSeq TCGA FAWG TCGA_RNA-Seq WASF2-FGR WASF2 chr1 27489986 - FGR chr1 27625151 - Exonic hg38 OV TCGA-13-0893-01B 2 1 5'UTR-5'UTR Intra-chr p36.11 p35.3 TK:Src Seq+ 96642 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAZ1B-BCL7B BAZ1B chr7 73459536 - BCL7B chr7 73552242 - Exonic hg38 OV TCGA-13-0893-01B 1 2 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 96643 ChimerSeq TCGA FAWG TCGA_RNA-Seq QKI-MRPL14 QKI chr6 163478896 + MRPL14 chr6 44116629 - Exonic hg38 OV TCGA-13-0897-01A 29 4 In-Frame Intra-chr q26 p21.1 Seq+ 96644 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMPD2-STXBP3 AMPD2 chr1 109620278 + STXBP3 chr1 108796234 + Exonic hg38 OV TCGA-13-0897-01A 10 2 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 96645 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNRF3-EWSR1 ZNRF3 chr22 28987201 + EWSR1 chr22 29273741 + Exonic hg38 OV TCGA-13-0900-01B 25 8 In-Frame Intra-chr q12.1 q12.2 Seq+ 96646 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM6A-YEATS4 KDM6A chrX 45061419 + YEATS4 chr12 69390147 + Exonic hg38 OV TCGA-13-0901-01B 95 24 Out-of-frame Inter-chr p11.3 Oncogene Tumor suppressor gene q15 Seq+ 96647 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF721-CPLX1 ZNF721 chr4 499056 - CPLX1 chr4 824601 - Exonic hg38 OV TCGA-13-0901-01B 19 12 5'UTR-5'UTR Intra-chr p16.3 Transcription factor p16.3 Seq+ 96648 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP214-SEC14L2 NUP214 chr9 131135226 + SEC14L2 chr22 30422295 + Exonic hg38 OV TCGA-13-0901-01B 18 0 Out-of-frame Inter-chr q34.13 Oncogene q12.2 Tumor suppressor gene Seq+ 96649 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC17-RAB10 DNAJC17 chr15 40807369 - RAB10 chr2 26127144 + Exonic hg38 OV TCGA-13-0906-01A 18 16 In-Frame Inter-chr q15.1 p23.3 Seq+ 96650 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB10-DNAJC17 RAB10 chr2 26109906 + DNAJC17 chr15 40779997 - Exonic hg38 OV TCGA-13-0906-01A 17 5 In-Frame Inter-chr p23.3 q15.1 Seq+ 96651 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF564-POLN ZNF564 chr19 12551330 - POLN chr4 2095933 - Exonic hg38 OV TCGA-13-0906-01A 13 0 Out-of-frame Inter-chr p13.2 Transcription factor p16.3 Seq+ 96652 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCGF5-RPP30 PCGF5 chr10 91261424 + RPP30 chr10 90895880 + Exonic hg38 OV TCGA-13-0911-01A 71 1 In-Frame Intra-chr q23.32 q23.31 Seq+ 96653 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHISA5-LRRC6 SHISA5 chr3 48501137 - LRRC6 chr8 132583779 - Exonic hg38 OV TCGA-13-0911-01A 10 0 CDS-3'UTR Inter-chr p21.31 q24.22 Seq+ 96654 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5423441 - RNF216 chr7 5652510 - Exonic hg38 OV TCGA-13-0911-01A 5 2 5'UTR-CDS Intra-chr p22.1 p22.1 Seq+ 96655 ChimerSeq TCGA FAWG TCGA_RNA-Seq KPNA6-C6orf48 KPNA6 chr1 32108134 + C6orf48 chr6 31835411 + Exonic hg38 OV TCGA-13-0913-01A 62 18 Out-of-frame Inter-chr p35.2 Seq+ 96656 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA3-OSBPL6 PLEKHA3 chr2 178480909 + OSBPL6 chr2 178372126 + Exonic hg38 OV TCGA-13-0913-01A 57 26 Out-of-frame Intra-chr q31.2 q31.2 Seq+ 96657 ChimerSeq TCGA FAWG TCGA_RNA-Seq RABL6-TMEM141 RABL6 chr9 136808326 + TMEM141 chr9 136792251 + Exonic hg38 OV TCGA-13-0913-01A 38 23 In-Frame Intra-chr q34.3 q34.3 Seq+ 96658 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1XR1-DHX30 TBL1XR1 chr3 177197121 - DHX30 chr3 47805326 + Exonic hg38 OV TCGA-13-0920-01A 6 12 5'UTR-5'UTR Intra-chr q26.32 p21.31 Seq+ 96659 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTD1-TTC29 DTD1 chr20 18628233 + TTC29 chr4 146707551 - Exonic hg38 OV TCGA-13-0920-01A 7 2 Out-of-frame Inter-chr p11.23 q31.22 Seq+ 96660 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS37C-AHNAK VPS37C chr11 61161391 - AHNAK chr11 62491831 - Exonic hg38 OV TCGA-13-0920-01A 4 2 5'UTR-CDS Intra-chr q12.2 q12.3 Tumor suppressor gene Seq+ 96661 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF15-BCL2L1 KIF15 chr3 44761884 + BCL2L1 chr20 31666086 - Exonic hg38 OV TCGA-13-0920-01A 1 6 3'UTR-3'UTR Inter-chr q11.21 Oncogene 96662 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPM1-CYP4F12 DPM1 chr20 50955186 - CYP4F12 chr19 15696430 + Exonic hg38 OV TCGA-13-0923-01A 183 63 In-Frame Inter-chr q13.13 p13.12 Seq+ 96663 ChimerSeq TCGA FAWG TCGA_RNA-Seq IP6K2-PRKAR2A IP6K2 chr3 48717157 - PRKAR2A chr3 48765349 - Exonic hg38 OV TCGA-13-0923-01A 19 0 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 96664 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC7A2-BAZ2B SLC7A2 chr8 17544606 + BAZ2B chr2 159555865 - Exonic hg38 OV TCGA-13-0923-01A 7 0 CDS-5'UTR Inter-chr p22 q24.2 Transcription factor Seq+ 96665 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL2L1-RHAG BCL2L1 chr20 31721655 - RHAG chr6 49615771 - Exonic hg38 OV TCGA-13-0924-01A 4 3 In-Frame Inter-chr q11.21 Oncogene p12.3 Seq+ 96666 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX10-ATM DDX10 chr11 108852209 + ATM chr11 108365082 + Exonic hg38 OV TCGA-13-1403-01A 20 14 In-Frame Intra-chr q22.3 q22.3 Atypical:PIKK Oncogene Tumor suppressor gene Seq+ 96667 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R37-IGSF23 PPP1R37 chr19 45093527 + IGSF23 chr19 44623703 + Exonic hg38 OV TCGA-13-1403-01A 12 7 Out-of-frame Intra-chr q13.32 q13.31 Seq+ 96668 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0100-FAM222B KIAA0100 chr17 28631479 - FAM222B chr17 28766707 - Exonic hg38 OV TCGA-13-1403-01A 8 4 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 96669 ChimerSeq TCGA FAWG TCGA_RNA-Seq LYAR-CORO1B LYAR chr4 4290036 - CORO1B chr11 67441514 - Exonic hg38 OV TCGA-13-1403-01A 5 13 5'UTR-CDS Inter-chr p16.3 q13.2 Seq+ 96670 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAZ2B-PLA2R1 BAZ2B chr2 159428311 - PLA2R1 chr2 159969359 - Exonic hg38 OV TCGA-13-1403-01A 5 5 Out-of-frame Intra-chr q24.2 Transcription factor q24.2 Tumor suppressor gene Seq+ 96671 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBOAT7-LILRB5 MBOAT7 chr19 54178765 - LILRB5 chr19 54257244 - Exonic hg38 OV TCGA-13-1404-01A 10 3 5'UTR-5'UTR Intra-chr Seq+ 96672 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF317-AP3D1 ZNF317 chr19 9140592 + AP3D1 chr19 2115613 - Exonic hg38 OV TCGA-13-1405-01A 270 34 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.3 Seq+ 96673 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATAD2B-CRTC2 GATAD2B chr1 153922733 - CRTC2 chr1 153949384 - Exonic hg38 OV TCGA-13-1405-01A 130 67 5'UTR-CDS Intra-chr Transcription factor q21.3 Seq+ 96674 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETHE1-UPK3A ETHE1 chr19 43526515 - UPK3A chr22 45295560 + Exonic hg38 OV TCGA-13-1405-01A 109 54 Out-of-frame Inter-chr q13.31 q13.31 Seq+ 96675 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCHSD2-CHRM1 FCHSD2 chr11 73140031 - CHRM1 chr11 62911178 - Exonic hg38 OV TCGA-13-1405-01A 77 35 CDS-5'UTR Intra-chr q13.4 q12.3 Seq+ 96676 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALY-TMEM248 RALY chr20 33994131 + TMEM248 chr7 66941848 + Exonic hg38 OV TCGA-13-1405-01A 62 18 5'UTR-5'UTR Inter-chr q11.22 q11.21 Seq+ 96677 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM248-RALY TMEM248 chr7 66921461 + RALY chr20 34031522 + Exonic hg38 OV TCGA-13-1405-01A 60 17 5'UTR-5'UTR Inter-chr q11.21 q11.22 Seq+ 96678 ChimerSeq TCGA FAWG TCGA_RNA-Seq MUC16-THADA MUC16 chr19 8953894 - THADA chr2 43505735 - Exonic hg38 OV TCGA-13-1405-01A 51 46 Out-of-frame Inter-chr p13.2 p21 Seq+ 96679 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3IL1-AHNAK RAB3IL1 chr11 61902442 - AHNAK chr11 62436483 - Exonic hg38 OV TCGA-13-1405-01A 42 28 CDS-3'UTR Intra-chr q12.3 q12.3 Tumor suppressor gene Seq+ 96680 ChimerSeq TCGA FAWG TCGA_RNA-Seq POU2F1-MAEL POU2F1 chr1 167220958 + MAEL chr1 166991378 + Exonic hg38 OV TCGA-13-1405-01A 31 3 Out-of-frame Intra-chr q24.2 Transcription factor q24.1 Seq+ 96681 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L1-HTR3C EPB41L1 chr20 36112480 + HTR3C chr3 184055312 + Exonic hg38 OV TCGA-13-1405-01A 11 36 5'UTR-CDS Inter-chr q11.23 q27.1 Seq+ 96682 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSHZ2-PIGU TSHZ2 chr20 53256444 + PIGU chr20 34657244 - Exonic hg38 OV TCGA-13-1405-01A 16 8 Out-of-frame Intra-chr q13.2 Transcription factor q11.22 Seq+ 96683 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF115-HFE2 RNF115 chr1 145784539 - HFE2 chr1 146036745 - Exonic hg38 OV TCGA-13-1405-01A 14 1 Out-of-frame Intra-chr q21.1 q21.1 96684 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFITM10-CFL1 IFITM10 chr11 1747667 - CFL1 chr11 65826609 - Exonic hg38 OV TCGA-13-1405-01A 12 4 5'UTR-3'UTR Intra-chr q13.1 Seq+ 96685 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP13-NOX5 AKAP13 chr15 85380798 + NOX5 chr15 69026528 + Exonic hg38 OV TCGA-13-1405-01A 12 1 5'UTR-5'UTR Intra-chr q25.3 q23 Seq+ 96686 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC17-INO80 DNAJC17 chr15 40773727 - INO80 chr15 41005687 - Exonic hg38 OV TCGA-13-1405-01A 10 2 In-Frame Intra-chr q15.1 q15.1 Seq+ 96687 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAB1-SMG9 TAB1 chr22 39421971 + SMG9 chr19 43750747 - Exonic hg38 OV TCGA-13-1405-01A 9 3 CDS-5'UTR Inter-chr q13.1 q13.31 Seq+ 96688 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R15B-PIK3C2B PPP1R15B chr1 204409492 - PIK3C2B chr1 204469886 - Exonic hg38 OV TCGA-13-1405-01A 8 6 CDS-5'UTR Intra-chr q32.1 q32.1 Oncogene Seq+ 96689 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP33-FUBP1 USP33 chr1 77759643 - FUBP1 chr1 77970015 - Exonic hg38 OV TCGA-13-1405-01A 7 8 5'UTR-CDS Intra-chr p31.1 Tumor suppressor gene p31.1 Oncogene Seq+ 96690 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLA1-TSPAN7 POLA1 chrX 24748992 + TSPAN7 chrX 38666121 + Exonic hg38 OV TCGA-13-1407-01A 14 14 In-Frame Intra-chr p22.11 p11.4 Seq+ 96691 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBFB-PLEKHG4 CBFB chr16 67082308 + PLEKHG4 chr16 67278741 + Exonic hg38 OV TCGA-13-1407-01A 8 9 CDS-5'UTR Intra-chr q22.1 q22.1 Seq+ 96692 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDH3A2-IFNK ALDH3A2 chr17 19671956 + IFNK chr9 27526007 + Exonic hg38 OV TCGA-13-1408-01A 11 11 CDS-3'UTR Inter-chr p11.2 p21.2 Seq+ 96693 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF561-MED16 ZNF561 chr19 9617045 - MED16 chr19 871253 - Exonic hg38 OV TCGA-13-1409-01A 23 2 CDS-5'UTR Intra-chr p13.2 Transcription factor p13.3 Seq+ 96694 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUPT5H-CALR3 SUPT5H chr19 39445965 + CALR3 chr19 16490570 - Exonic hg38 OV TCGA-13-1410-01A 36 21 Out-of-frame Intra-chr q13.2 p13.11 Seq+ 96695 ChimerSeq TCGA FAWG TCGA_RNA-Seq RCOR1-PPP2R5C RCOR1 chr14 102593325 + PPP2R5C chr14 101925141 + Exonic hg38 OV TCGA-13-1410-01A 35 21 Out-of-frame Intra-chr q32.31 q32.31 Tumor suppressor gene Seq+ 96696 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2K2-INSR MAP2K2 chr19 4110509 - INSR chr19 7132317 - Exonic hg38 OV TCGA-13-1410-01A 34 17 In-Frame Intra-chr p13.3 STE:STE7 Oncogene p13.2 TK:InsR Seq+ 96697 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTLL9-HM13 TTLL9 chr20 31879897 + HM13 chr20 31538179 + Exonic hg38 OV TCGA-13-1410-01A 9 6 In-Frame Intra-chr q11.21 q11.21 Seq+ 96698 ChimerSeq TCGA FAWG TCGA_RNA-Seq BISPR-NWD1 BISPR chr19 17413305 + NWD1 chr19 16799886 + Exonic hg38 OV TCGA-13-1410-01A 8 9 5'UTR-CDS Intra-chr p13.11 p13.11 96699 ChimerSeq TCGA FAWG TCGA_RNA-Seq MVB12A-NWD1 MVB12A chr19 17413305 + NWD1 chr19 16799886 + Exonic hg38 OV TCGA-13-1410-01A 8 9 5'UTR-CDS Intra-chr p13.11 p13.11 Seq+ 96700 ChimerSeq TCGA FAWG TCGA_RNA-Seq QARS-C3orf84 QARS chr3 49101355 - C3orf84 chr3 49178538 - Exonic hg38 OV TCGA-13-1411-01A 341 104 In-Frame Intra-chr p21.31 p21.31 Seq+ 96701 ChimerSeq TCGA FAWG TCGA_RNA-Seq FARP1-SLC15A1 FARP1 chr13 98412034 + SLC15A1 chr13 98688577 - Exonic hg38 OV TCGA-13-1411-01A 25 7 In-Frame Intra-chr q32.2 q32.3 96702 ChimerSeq TCGA FAWG TCGA_RNA-Seq NACA2-LSR NACA2 chr17 61590813 - LSR chr19 35266429 + Exonic hg38 OV TCGA-13-1411-01A 17 8 Out-of-frame Inter-chr q23.2 q13.12 Seq+ 96703 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDR1-PAK1 DDR1 chr6 30893423 + PAK1 chr11 77359017 - Exonic hg38 OV TCGA-13-1477-01A 109 34 3'UTR-CDS Inter-chr TK:DDR q14.1 STE:STE20 Seq+ 96704 ChimerSeq TCGA FAWG TCGA_RNA-Seq FUS-KAT8 FUS chr16 31180227 + KAT8 chr16 31127035 + Exonic hg38 OV TCGA-13-1481-01A 22 22 Out-of-frame Intra-chr p11.2 Tumor suppressor gene p11.2 Seq+ 96705 ChimerSeq TCGA FAWG TCGA_RNA-Seq C6orf223-SCAND1 C6orf223 chr6 44000700 + SCAND1 chr20 35954691 - Exonic hg38 OV TCGA-13-1481-01A 18 17 5'UTR-5'UTR Inter-chr p21.1 q11.23 Seq+ 96706 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAE1-GRAP2 SAE1 chr19 47131028 + GRAP2 chr22 39955819 + Exonic hg38 OV TCGA-13-1481-01A 15 5 Out-of-frame Inter-chr q13.32 q13.1 Seq+ 96707 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM198B-IGKJ1 FAM198B chr4 158125635 - IGKJ1 chr2 88861919 - Exonic hg38 OV TCGA-13-1481-01A 14 0 Out-of-frame Inter-chr q32.1 p11.2 96708 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCRIB-EEF1D SCRIB chr8 143808609 - EEF1D chr8 143590081 - Exonic hg38 OV TCGA-13-1481-01A 8 14 5'UTR-5'UTR Intra-chr Tumor suppressor gene Seq+ 96709 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1522-RBBP4 KIAA1522 chr1 32742189 + RBBP4 chr1 32668225 + Exonic hg38 OV TCGA-13-1483-01A 25 5 In-Frame Intra-chr p35.1 p35.1 Seq+ 96710 ChimerSeq TCGA FAWG TCGA_RNA-Seq EZR-C1orf50 EZR chr6 158818082 - C1orf50 chr1 42773563 + Exonic hg38 OV TCGA-13-1487-01A 131 14 In-Frame Inter-chr q25.3 p34.2 Seq+ 96711 ChimerSeq TCGA FAWG TCGA_RNA-Seq LONP1-CATSPERD LONP1 chr19 5719704 - CATSPERD chr19 5727268 + Exonic hg38 OV TCGA-13-1487-01A 22 3 In-Frame Intra-chr p13.3 p13.3 Seq+ 96712 ChimerSeq TCGA FAWG TCGA_RNA-Seq COA6-SLC35F3 COA6 chr1 234374389 + SLC35F3 chr1 234309101 + Exonic hg38 OV TCGA-13-1487-01A 16 8 Out-of-frame Intra-chr q42.2 q42.2 Seq+ 96713 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRCC3-CLIC2 BRCC3 chrX 155090839 + CLIC2 chrX 155280068 - Exonic hg38 OV TCGA-13-1487-01A 9 2 CDS-5'UTR Intra-chr q28 q28 Seq+ 96714 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOP1-FAM193B TOP1 chr20 41029455 + FAM193B chr5 177525205 - Exonic hg38 OV TCGA-13-1487-01A 8 3 Out-of-frame Inter-chr q12 Oncogene q35.3 Seq+ 96715 ChimerSeq TCGA FAWG TCGA_RNA-Seq QRICH1-MDGA1 QRICH1 chr3 49093912 - MDGA1 chr6 37658419 - Exonic hg38 OV TCGA-13-1487-01A 6 0 5'UTR-CDS Inter-chr p21.31 p21.2 Seq+ 96716 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA4A-DAP3 SEMA4A chr1 156163094 + DAP3 chr1 155729042 + Exonic hg38 OV TCGA-13-1487-01A 6 0 In-Frame Intra-chr q22 q22 Seq+ 96717 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD1-ARSG PSMD1 chr2 231057041 + ARSG chr17 68420189 + Exonic hg38 OV TCGA-13-1487-01A 4 2 In-Frame Inter-chr q37.1 q24.2 Seq+ 96718 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEAT1-POLA2 NEAT1 chr11 65434178 + POLA2 chr11 65280954 + Exonic hg38 OV TCGA-13-1488-01A 73 13 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 96719 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSRC1-MYBPHL PSRC1 chr1 109282680 - MYBPHL chr1 109298257 - Exonic hg38 OV TCGA-13-1488-01A 61 24 In-Frame Intra-chr p13.3 p13.3 Seq+ 96720 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM1-LAPTM5 PUM1 chr1 31059204 - LAPTM5 chr1 30742549 - Exonic hg38 OV TCGA-13-1488-01A 24 13 In-Frame Intra-chr p35.2 p35.2 Seq+ 96721 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEAT1_1-POLA2 NEAT1_1 chr11 65423383 + POLA2 chr11 65280992 + Exonic hg38 OV TCGA-13-1488-01A 10 2 Out-of-frame Intra-chr q13.1 q13.1 96722 ChimerSeq TCGA FAWG TCGA_RNA-Seq UQCRH-SLC48A1 UQCRH chr1 46303820 + SLC48A1 chr12 47779028 + Exonic hg38 OV TCGA-13-1488-01A 6 16 Out-of-frame Inter-chr p33 q13.11 Seq+ 96723 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK2-CARD19 ROCK2 chr2 11343996 - CARD19 chr9 93107674 + Exonic hg38 OV TCGA-13-1488-01A 9 1 Out-of-frame Inter-chr p25.1 AGC:DMPK q22.31 96724 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNK2-SUSD3 WNK2 chr9 93239976 + SUSD3 chr9 93084537 + Exonic hg38 OV TCGA-13-1488-01A 8 1 Out-of-frame Intra-chr q22.31 Tumor suppressor gene q22.31 Seq+ 96725 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPAN-GIPC2 PPAN chr19 10106412 + GIPC2 chr1 78135592 + Exonic hg38 OV TCGA-13-1488-01A 6 3 Out-of-frame Inter-chr p13.2 p31.1 Seq+ 96726 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF7-ATP5G2 ATF7 chr12 53600953 - ATP5G2 chr12 53672645 - Exonic hg38 OV TCGA-13-1488-01A 3 7 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 Seq+ 96727 ChimerSeq TCGA FAWG TCGA_RNA-Seq SF1-CST6 SF1 chr11 64778362 - CST6 chr11 66012186 + Exonic hg38 OV TCGA-13-1489-01A 89 52 CDS-3'UTR Intra-chr q13.1 q13.1 Tumor suppressor gene Seq+ 96728 ChimerSeq TCGA FAWG TCGA_RNA-Seq HEATR6-WFDC21P HEATR6 chr17 60076130 - WFDC21P chr17 60088301 - Exonic hg38 OV TCGA-13-1489-01A 26 3 CDS-3'UTR Intra-chr q23.1 q23.1 96729 ChimerSeq TCGA FAWG TCGA_RNA-Seq HPS3-CPB1 HPS3 chr3 149129940 + CPB1 chr3 148857457 + Exonic hg38 OV TCGA-13-1495-01A 296 104 Out-of-frame Intra-chr q24 q24 Seq+ 96730 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP13A3-TMEM14B ATP13A3 chr3 194485794 - TMEM14B chr6 10829007 + Exonic hg38 OV TCGA-13-1495-01A 141 40 5'UTR-3'UTR Inter-chr q29 p24.2 Seq+ 96731 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPSAP1-SRSF2 PRPSAP1 chr17 76348529 - SRSF2 chr17 76735158 - Exonic hg38 OV TCGA-13-1495-01A 50 17 CDS-3'UTR Intra-chr q25.1 q25.1 Oncogene Seq+ 96732 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF13-TM4SF4 RNF13 chr3 149813353 + TM4SF4 chr3 149474975 + Exonic hg38 OV TCGA-13-1495-01A 11 11 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 96733 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTXN1-BLVRB CTXN1 chr19 7925967 - BLVRB chr19 40458545 - Exonic hg38 OV TCGA-13-1495-01A 9 1 5'UTR-CDS Intra-chr p13.2 q13.2 Seq+ 96734 ChimerSeq TCGA FAWG TCGA_RNA-Seq KBTBD2-NT5C3A KBTBD2 chr7 32879435 - NT5C3A chr7 33017601 - Exonic hg38 OV TCGA-13-1496-01A 13 2 In-Frame Intra-chr p14.3 p14.3 Seq+ 96735 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTMA-AS2 PTMA chr2 231708751 + AS2 chr3 64799465 + Exonic hg38 OV TCGA-13-1496-01A 2 6 Out-of-frame Inter-chr q37.1 96736 ChimerSeq TCGA FAWG TCGA_RNA-Seq LONRF1-TRDC LONRF1 chr8 12740874 - TRDC chr14 22462932 + Exonic hg38 OV TCGA-13-1497-01A 22 9 Out-of-frame Inter-chr p23.1 q11.2 Seq+ 96737 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARD3-MTA1 PARD3 chr10 34696318 - MTA1 chr14 105463493 + Exonic hg38 OV TCGA-13-1497-01A 17 12 In-Frame Inter-chr p11.21 q32.33 Seq+ 96738 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB33B-SEC24D RAB33B chr4 139454444 + SEC24D chr4 118745060 - Exonic hg38 OV TCGA-13-1497-01A 15 6 In-Frame Intra-chr q31.1 q26 Seq+ 96739 ChimerSeq TCGA FAWG TCGA_RNA-Seq DUXAP9-ST7L DUXAP9 chr14 19062466 + ST7L chr1 112526111 - Exonic hg38 OV TCGA-13-1497-01A 12 3 5'UTR-CDS Inter-chr q11.2 p13.2 96740 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF6-LETM1 DCAF6 chr1 167937008 + LETM1 chr4 1849209 - Exonic hg38 OV TCGA-13-1497-01A 11 4 In-Frame Inter-chr q24.2 p16.3 Seq+ 96741 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPC-ZBTB7C HNRNPC chr14 21269298 - ZBTB7C chr18 48185995 - Exonic hg38 OV TCGA-13-1497-01A 9 12 5'UTR-5'UTR Inter-chr q11.2 q21.1 Tumor suppressor gene Transcription factor 96742 ChimerSeq TCGA FAWG TCGA_RNA-Seq SP3-NDUFB3 SP3 chr2 173954873 - NDUFB3 chr2 201078881 + Exonic hg38 OV TCGA-13-1497-01A 7 12 CDS-5'UTR Intra-chr q31.1 Transcription factor q33.1 Seq+ 96743 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAF2-METTL2A FAF2 chr5 176448470 + METTL2A chr17 62444837 + Exonic hg38 OV TCGA-13-1497-01A 6 12 Out-of-frame Inter-chr q35.2 q23.2 Seq+ 96744 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKAG2-NUB1 PRKAG2 chr7 151632069 - NUB1 chr7 151345348 + Exonic hg38 OV TCGA-13-1497-01A 7 7 In-Frame Intra-chr q36.1 q36.1 Seq+ 96745 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNCRIP-SEMA3A SYNCRIP chr6 85636967 - SEMA3A chr7 84110589 - Exonic hg38 OV TCGA-13-1497-01A 5 11 In-Frame Inter-chr q14.3 q21.11 Seq+ 96746 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUCO-DNM3 SUCO chr1 172570730 + DNM3 chr1 172379018 + Exonic hg38 OV TCGA-13-1497-01A 4 6 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 96747 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGRN1-C16orf96 MGRN1 chr16 4652824 + C16orf96 chr16 4593224 + Exonic hg38 OV TCGA-13-1498-01A 10 2 In-Frame Intra-chr p13.3 p13.3 Seq+ 96748 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGAT4B-MRNIP MGAT4B chr5 179806487 - MRNIP chr5 179835336 - Exonic hg38 OV TCGA-13-1498-01A 8 9 5'UTR-5'UTR Intra-chr 96749 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATAD2B-IGSF8 GATAD2B chr1 153922733 - IGSF8 chr1 160095246 - Exonic hg38 OV TCGA-13-1498-01A 9 3 5'UTR-CDS Intra-chr Transcription factor q23.2 Seq+ 96750 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCC1-DAD1 SMARCC1 chr3 47772817 - DAD1 chr14 22575233 - Exonic hg38 OV TCGA-13-1501-01A 47 14 Out-of-frame Inter-chr p21.31 Tumor suppressor gene q11.2 Seq+ 96751 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPM4-ELOF1 TRPM4 chr19 49158259 + ELOF1 chr19 11554365 - Exonic hg38 OV TCGA-13-1501-01A 36 30 Out-of-frame Intra-chr q13.33 p13.2 Seq+ 96752 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAT10-CAPRIN1 NAT10 chr11 34105792 + CAPRIN1 chr11 34096479 + Exonic hg38 OV TCGA-13-1501-01A 17 3 5'UTR-CDS Intra-chr p13 p13 Seq+ 96753 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC2-GMDS EXOC2 chr6 572520 - GMDS chr6 1742586 - Exonic hg38 OV TCGA-13-1501-01A 11 5 In-Frame Intra-chr p25.3 p25.3 Seq+ 96754 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO9B-TECR MYO9B chr19 17075874 + TECR chr19 14562525 + Exonic hg38 OV TCGA-13-1505-01A 13 16 5'UTR-5'UTR Intra-chr p13.11 p13.12 Seq+ 96755 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEX6-PPP2R5D PEX6 chr6 42978269 - PPP2R5D chr6 42989611 + Exonic hg38 OV TCGA-13-1505-01A 9 5 In-Frame Intra-chr p21.1 p21.1 Seq+ 96756 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCND3-PPP2R5D CCND3 chr6 42048501 - PPP2R5D chr6 42989611 + Exonic hg38 OV TCGA-13-1505-01A 9 4 5'UTR-5'UTR Intra-chr p21.1 p21.1 Seq+ 96757 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRF1-TRERF1 ADGRF1 chr6 47025854 - TRERF1 chr6 42236411 - Exonic hg38 OV TCGA-13-1505-01A 7 6 Out-of-frame Intra-chr p12.3 p21.1 Transcription factor 96758 ChimerSeq TCGA FAWG TCGA_RNA-Seq TGFBRAP1-CNOT9 TGFBRAP1 chr2 105296356 - CNOT9 chr2 218582971 + Exonic hg38 OV TCGA-13-1505-01A 7 1 In-Frame Intra-chr q12.2 q35 96759 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP107-MDM2 NUP107 chr12 68690746 + MDM2 chr12 68848676 + Exonic hg38 OV TCGA-13-1505-01A 5 3 CDS-3'UTR Intra-chr q15 q15 Oncogene 96760 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPM3-FAM193A TPM3 chr1 154182988 - FAM193A chr4 2731775 + Exonic hg38 OV TCGA-13-1506-01A 89 20 In-Frame Inter-chr q21.3 p16.3 Seq+ 96761 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAIP1-DAB2 PAIP1 chr5 43555830 - DAB2 chr5 39375084 - Exonic hg38 OV TCGA-13-1506-01A 76 22 In-Frame Intra-chr p12 p13.1 Tumor suppressor gene Seq+ 96762 ChimerSeq TCGA FAWG TCGA_RNA-Seq FLOT2-MYO18A FLOT2 chr17 28897526 - MYO18A chr17 29095059 - Exonic hg38 OV TCGA-13-1506-01A 28 8 Out-of-frame Intra-chr q11.2 q11.2 Oncogene Seq+ 96763 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFIT1-LIPA IFIT1 chr10 89392717 + LIPA chr10 89247649 - Exonic hg38 OV TCGA-13-1506-01A 14 51 5'UTR-5'UTR Intra-chr q23.31 q23.31 96764 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM2-ARFIP1 TRIM2 chr4 153204560 + ARFIP1 chr4 152910064 + Exonic hg38 OV TCGA-13-1506-01A 19 10 In-Frame Intra-chr q31.3 q31.3 Seq+ 96765 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPZB-TMCO4 CAPZB chr1 19485436 - TMCO4 chr1 19683444 - Exonic hg38 OV TCGA-13-1506-01A 16 9 In-Frame Intra-chr p36.13 p36.13 Seq+ 96766 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK1A1-PDE6A CSNK1A1 chr5 149520290 - PDE6A chr5 149863266 - Exonic hg38 OV TCGA-13-1506-01A 13 6 In-Frame Intra-chr q32 Tumor suppressor gene q32 Seq+ 96767 ChimerSeq TCGA FAWG TCGA_RNA-Seq ECE1-SLC48A1 ECE1 chr1 21290070 - SLC48A1 chr12 47772170 + Exonic hg38 OV TCGA-13-1506-01A 13 5 CDS-5'UTR Inter-chr p36.12 q13.11 Seq+ 96768 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP54-PCDH15 USP54 chr10 73571421 - PCDH15 chr10 55166651 - Exonic hg38 OV TCGA-13-1507-01A 30 15 CDS-5'UTR Intra-chr q22.2 q21.1 Seq+ 96769 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF144A-HDLBP RNF144A chr2 6917622 + HDLBP chr2 241268541 - Exonic hg38 OV TCGA-13-1507-01A 7 2 5'UTR-5'UTR Intra-chr p25.1 Tumor suppressor gene q37.3 Seq+ 96770 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPYD-CSNK1G1 DPYD chr1 97920884 - CSNK1G1 chr15 64259241 - Exonic hg38 OV TCGA-13-1510-01A 62 19 Out-of-frame Inter-chr p21.3 Oncogene q22.31 Seq+ 96771 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKAL1-SMARCA2 CDKAL1 chr6 20548705 + SMARCA2 chr9 2192704 + Exonic hg38 OV TCGA-13-1510-01A 30 18 Out-of-frame Inter-chr p22.3 p24.3 Tumor suppressor gene Seq+ 96772 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXNRD1-SDS TXNRD1 chr12 104289040 + SDS chr12 113425820 - Exonic hg38 OV TCGA-13-1510-01A 11 3 5'UTR-5'UTR Intra-chr q23.3 q24.13 Seq+ 96773 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAC3D1-SNX15 SAC3D1 chr11 65041866 + SNX15 chr11 65039686 + Exonic hg38 OV TCGA-13-1511-01A 184 46 In-Frame Intra-chr q13.1 q13.1 Seq+ 96774 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS18C-ENOPH1 MRPS18C chr4 83456958 + ENOPH1 chr4 82447920 + Exonic hg38 OV TCGA-13-1511-01A 75 22 In-Frame Intra-chr q21.23 q21.22 Seq+ 96775 ChimerSeq TCGA FAWG TCGA_RNA-Seq LTBP1-BRE LTBP1 chr2 32948945 + BRE chr2 28129271 + Exonic hg38 OV TCGA-13-1511-01A 51 9 Out-of-frame Intra-chr p22.3 Seq+ 96776 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLN2-FOXB1 TLN2 chr15 62657898 + FOXB1 chr15 60036110 + Exonic hg38 OV TCGA-13-1511-01A 40 16 CDS-3'UTR Intra-chr q22.2 q22.2 Transcription factor Seq+ 96777 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS26A-LRRTM3 VPS26A chr10 69124280 + LRRTM3 chr10 67097587 + Exonic hg38 OV TCGA-13-1511-01A 22 13 In-Frame Intra-chr q22.1 q21.3 Seq+ 96778 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN9-SCAPER PTPN9 chr15 75578714 - SCAPER chr15 76434310 - Exonic hg38 OV TCGA-13-1511-01A 22 4 In-Frame Intra-chr q24.2 q24.3 Seq+ 96779 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP6NL-FRMD4A USP6NL chr10 11597631 - FRMD4A chr10 13858912 - Exonic hg38 OV TCGA-13-1511-01A 21 6 Out-of-frame Intra-chr p14 p13 Seq+ 96780 ChimerSeq TCGA FAWG TCGA_RNA-Seq KRAS-LMNTD1 KRAS chr12 25245274 - LMNTD1 chr12 25503800 - Exonic hg38 OV TCGA-13-1511-01A 19 13 Out-of-frame Intra-chr p12.1 Oncogene p12.1 Tumor suppressor gene 96781 ChimerSeq TCGA FAWG TCGA_RNA-Seq LUC7L-AXIN1 LUC7L chr16 199062 - AXIN1 chr16 314683 - Exonic hg38 OV TCGA-13-1511-01A 18 5 Out-of-frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Seq+ 96782 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN4-VPREB3 TSPAN4 chr11 850367 + VPREB3 chr22 23753198 - Exonic hg38 OV TCGA-13-1511-01A 15 7 Out-of-frame Inter-chr p15.5 q11.23 Seq+ 96783 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC26A2-ARHGEF37 SLC26A2 chr5 149960979 + ARHGEF37 chr5 149624012 + Exonic hg38 OV TCGA-13-1511-01A 15 3 5'UTR-CDS Intra-chr q32 q32 Seq+ 96784 ChimerSeq TCGA FAWG TCGA_RNA-Seq HACD3-ANKDD1A HACD3 chr15 65530718 + ANKDD1A chr15 64930822 + Exonic hg38 OV TCGA-13-1511-01A 10 3 In-Frame Intra-chr q22.31 q22.31 96785 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGPL1-ADAMTS14 SGPL1 chr10 70816880 + ADAMTS14 chr10 70757962 + Exonic hg38 OV TCGA-13-1511-01A 8 6 In-Frame Intra-chr q22.1 q22.1 Seq+ 96786 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID4B-GNPAT ARID4B chr1 235326914 - GNPAT chr1 231262723 + Exonic hg38 OV TCGA-13-1512-01A 46 9 In-Frame Intra-chr q42.3 q42.2 Seq+ 96787 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAN1A2-CD101 MAN1A2 chr1 117502970 + CD101 chr1 117033860 + Exonic hg38 OV TCGA-13-1512-01A 22 10 Out-of-frame Intra-chr p12 p13.1 Seq+ 96788 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK3-PAQR3 STK3 chr8 98526742 - PAQR3 chr4 78906161 - Exonic hg38 OV TCGA-13-1512-01A 22 3 CDS-3'UTR Inter-chr q22.2 q21.21 Seq+ 96789 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNA2D3-SRP68 CACNA2D3 chr3 54123594 + SRP68 chr17 76067330 - Exonic hg38 OV TCGA-13-1512-01A 3 7 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q25.1 Seq+ 96790 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC38A1-HDAC7 SLC38A1 chr12 46206080 - HDAC7 chr12 47802274 - Exonic hg38 OV TCGA-13-2060-01A 23 2 In-Frame Intra-chr q13.11 q13.11 Seq+ 96791 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED16-POLR2E MED16 chr19 879937 - POLR2E chr19 1089551 - Exonic hg38 OV TCGA-13-A5FT-01A 192 137 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 96792 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOR2-PIP4K2B NCOR2 chr12 124567308 - PIP4K2B chr17 38786920 - Exonic hg38 OV TCGA-13-A5FT-01A 79 23 5'UTR-5'UTR Inter-chr q24.31 q12 Seq+ 96793 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPF31-CACNG7 PRPF31 chr19 54118633 + CACNG7 chr19 53942036 + Exonic hg38 OV TCGA-13-A5FT-01A 67 33 3'UTR-CDS Intra-chr q13.42 Seq+ 96794 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCT3-ARHGEF11 CCT3 chr1 156334713 - ARHGEF11 chr1 156961775 - Exonic hg38 OV TCGA-13-A5FT-01A 46 13 In-Frame Intra-chr q22 q23.1 Seq+ 96795 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRK-SLC43A2 CRK chr17 1455877 - SLC43A2 chr17 1593279 - Exonic hg38 OV TCGA-13-A5FT-01A 36 23 5'UTR-5'UTR Intra-chr p13.3 Seq+ 96796 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDXDC2P-NOB1 PDXDC2P chr16 70065756 - NOB1 chr16 69754726 - Exonic hg38 OV TCGA-13-A5FT-01A 28 15 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 96797 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-SERPINH1 UVRAG chr11 75912039 + SERPINH1 chr11 75566316 + Exonic hg38 OV TCGA-13-A5FT-01A 29 9 CDS-5'UTR Intra-chr q13.5 Tumor suppressor gene q13.5 Seq+ 96798 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R37-NECTIN2 PPP1R37 chr19 45147635 + NECTIN2 chr19 44873916 + Exonic hg38 OV TCGA-13-A5FT-01A 24 6 3'UTR-CDS Intra-chr q13.32 q13.32 96799 ChimerSeq TCGA FAWG TCGA_RNA-Seq SP1-C12orf10 SP1 chr12 53411435 + C12orf10 chr12 53305908 + Exonic hg38 OV TCGA-13-A5FT-01A 16 7 3'UTR-CDS Intra-chr q13.13 Transcription factor q13.13 Seq+ 96800 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRK6-ZNF346 GRK6 chr5 177436530 + ZNF346 chr5 177044389 + Exonic hg38 OV TCGA-13-A5FT-01A 14 8 In-Frame Intra-chr q35.3 q35.2 Transcription factor Seq+ 96801 ChimerSeq TCGA FAWG TCGA_RNA-Seq XRCC6-L3MBTL2 XRCC6 chr22 41658352 + L3MBTL2 chr22 41225794 + Exonic hg38 OV TCGA-13-A5FT-01A 14 7 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 96802 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP4-CELF1 LRP4 chr11 46883871 - CELF1 chr11 47489024 - Exonic hg38 OV TCGA-13-A5FT-01A 12 6 In-Frame Intra-chr p11.2 p11.2 Seq+ 96803 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSTYK-INTS3 DSTYK chr1 205211271 - INTS3 chr1 153757572 + Exonic hg38 OV TCGA-13-A5FT-01A 10 5 CDS-3'UTR Intra-chr q32.1 q21.3 Seq+ 96804 ChimerSeq TCGA FAWG TCGA_RNA-Seq EZH1-MAP3K14 EZH1 chr17 42709849 - MAP3K14 chr17 45290768 - Exonic hg38 OV TCGA-13-A5FT-01A 10 4 Out-of-frame Intra-chr q21.2 Tumor suppressor gene q21.31 Seq+ 96805 ChimerSeq TCGA FAWG TCGA_RNA-Seq EDC3-CYP11A1 EDC3 chr15 74655733 - CYP11A1 chr15 74348055 - Exonic hg38 OV TCGA-13-A5FT-01A 9 4 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 96806 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTPS1-NFYC CTPS1 chr1 40991845 + NFYC chr1 40738836 + Exonic hg38 OV TCGA-13-A5FT-01A 8 7 5'UTR-5'UTR Intra-chr p34.2 p34.2 Transcription factor Seq+ 96807 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF123-ARIH2 RNF123 chr3 49706898 + ARIH2 chr3 48973699 + Exonic hg38 OV TCGA-13-A5FT-01A 9 3 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 96808 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX35-VSTM2L DHX35 chr20 39002868 + VSTM2L chr20 37931635 + Exonic hg38 OV TCGA-13-A5FT-01A 8 4 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 96809 ChimerSeq TCGA FAWG TCGA_RNA-Seq EML4-HNRNPA1P57 EML4 chr2 42169636 + HNRNPA1P57 chr2 41156597 + Exonic hg38 OV TCGA-13-A5FT-01A 7 5 Out-of-frame Intra-chr p21 Oncogene p22.1 Seq+ 96810 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUCB1-FAM83E NUCB1 chr19 48913564 + FAM83E chr19 48601369 - Exonic hg38 OV TCGA-20-0987-01A 73 28 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 96811 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM129B-PTRH1 FAM129B chr9 127516857 - PTRH1 chr9 127695141 - Exonic hg38 OV TCGA-20-0987-01A 55 15 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 96812 ChimerSeq TCGA FAWG TCGA_RNA-Seq PMVK-PBXIP1 PMVK chr1 154932352 - PBXIP1 chr1 154953757 - Exonic hg38 OV TCGA-20-0987-01A 20 13 5'UTR-5'UTR Intra-chr q21.3 q21.3 Seq+ 96813 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRPK1-CPNE5 SRPK1 chr6 35920468 - CPNE5 chr6 36765376 - Exonic hg38 OV TCGA-20-0987-01A 15 24 In-Frame Intra-chr p21.31 CMGC:SRPK p21.2 Seq+ 96814 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A11-CDC42EP4 SLC39A11 chr17 73031556 - CDC42EP4 chr17 73286612 - Exonic hg38 OV TCGA-20-0987-01A 7 1 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 96815 ChimerSeq TCGA FAWG TCGA_RNA-Seq DERL2-NLRP1 DERL2 chr17 5480054 - NLRP1 chr17 5533988 - Exonic hg38 OV TCGA-20-0987-01A 6 2 In-Frame Intra-chr p13.2 p13.2 Oncogene Seq+ 96816 ChimerSeq TCGA FAWG TCGA_RNA-Seq AREL1-SYNDIG1L AREL1 chr14 74684454 - SYNDIG1L chr14 74409801 - Exonic hg38 OV TCGA-20-0987-01A 4 8 CDS-5'UTR Intra-chr q24.3 q24.3 Seq+ 96817 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGPAT3-AGO3 AGPAT3 chr21 43865345 + AGO3 chr1 36027114 + Exonic hg38 OV TCGA-20-0987-01A 5 2 5'UTR-CDS Inter-chr q22.3 p34.3 Seq+ 96818 ChimerSeq TCGA FAWG TCGA_RNA-Seq PICALM-ME3 PICALM chr11 86068651 - ME3 chr11 86559823 - Exonic hg38 OV TCGA-20-0987-01A 5 1 Out-of-frame Intra-chr q14.2 q14.2 Seq+ 96819 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPM4-RPL18A TPM4 chr19 16089120 + RPL18A chr19 17861293 + Exonic hg38 OV TCGA-20-0991-01A 110 61 In-Frame Intra-chr p13.12 p13.11 Seq+ 96820 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBFA2T2-TOX2 CBFA2T2 chr20 33490301 + TOX2 chr20 44051306 + Exonic hg38 OV TCGA-20-0991-01A 32 3 Out-of-frame Intra-chr q11.21 q13.12 Seq+ 96821 ChimerSeq TCGA FAWG TCGA_RNA-Seq RLF-EBNA1BP2 RLF chr1 40222710 + EBNA1BP2 chr1 43261918 - Exonic hg38 OV TCGA-20-0991-01A 28 11 CDS-5'UTR Intra-chr p34.2 Transcription factor p34.2 Seq+ 96822 ChimerSeq TCGA FAWG TCGA_RNA-Seq HUWE1-CLCN5 HUWE1 chrX 53573750 - CLCN5 chrX 50042316 + Exonic hg38 OV TCGA-20-0991-01A 15 9 Out-of-frame Intra-chr p11.22 p11.23 Seq+ 96823 ChimerSeq TCGA FAWG TCGA_RNA-Seq EYA2-SERINC3 EYA2 chr20 47016297 + SERINC3 chr20 44514040 - Exonic hg38 OV TCGA-20-0991-01A 9 9 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 96824 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDH7A1-PIP ALDH7A1 chr5 126575420 - PIP chr7 143135194 + Exonic hg38 OV TCGA-20-1682-01A 29 16 In-Frame Inter-chr q23.2 q34 Seq+ 96825 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIPA1L3-NF1P3 SIPA1L3 chr19 38088851 + NF1P3 chr21 14000927 + Exonic hg38 OV TCGA-20-1682-01A 7 2 Out-of-frame Inter-chr q13.13 q11.2 Seq+ 96826 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D8B-RNF128 TBC1D8B chrX 106802805 + RNF128 chrX 106791066 + Exonic hg38 OV TCGA-20-1682-01A 5 7 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 96827 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM135-ELOVL1 TMEM135 chr11 87236684 + ELOVL1 chr1 43365623 - Exonic hg38 OV TCGA-20-1682-01A 4 3 5'UTR-5'UTR Inter-chr q14.2 p34.2 Seq+ 96828 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGKV2D-IGKJ5 IGKV2D chr2 90053363 + IGKJ5 chr2 88860599 - Exonic hg38 OV TCGA-20-1683-01A 366 0 Out-of-frame Intra-chr p11.2 96829 ChimerSeq TCGA FAWG TCGA_RNA-Seq WTIP-SCGB2B2 WTIP chr19 34495771 + SCGB2B2 chr19 34632640 - Exonic hg38 OV TCGA-20-1683-01A 25 20 CDS-5'UTR Intra-chr q13.11 q13.11 Seq+ 96830 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCGRT-PRMT1 FCGRT chr19 49514486 + PRMT1 chr19 49680487 + Exonic hg38 OV TCGA-20-1683-01A 25 11 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 96831 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE3C-DNAJB6 UBE3C chr7 157139338 + DNAJB6 chr7 157358547 + Exonic hg38 OV TCGA-20-1683-01A 18 4 CDS-5'UTR Intra-chr q36.3 q36.3 Seq+ 96832 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLX4IP-CEP89 SLX4IP chr20 10458231 + CEP89 chr19 32887841 - Exonic hg38 OV TCGA-20-1683-01A 14 3 In-Frame Inter-chr p12.2 q13.11 Seq+ 96833 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREBBP-ZNF597 CREBBP chr16 3850297 - ZNF597 chr16 3443206 - Exonic hg38 OV TCGA-20-1683-01A 13 6 CDS-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Transcription factor Seq+ 96834 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAG4-ZNF672 BAG4 chr8 38192795 + ZNF672 chr1 248844483 + Exonic hg38 OV TCGA-20-1683-01A 10 6 CDS-5'UTR Inter-chr p11.23 q44 Transcription factor Seq+ 96835 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF6-SDHC ATF6 chr1 161853323 + SDHC chr1 161362329 + Exonic hg38 OV TCGA-20-1683-01A 9 5 In-Frame Intra-chr q23.3 Transcription factor q23.3 Oncogene Seq+ 96836 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITCH-CBFA2T2 ITCH chr20 34393881 + CBFA2T2 chr20 33644347 + Exonic hg38 OV TCGA-20-1684-01A 75 38 Out-of-frame Intra-chr q11.22 q11.21 Seq+ 96837 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2G1-PELP1 UBE2G1 chr17 4366271 - PELP1 chr17 4676812 - Exonic hg38 OV TCGA-20-1684-01A 60 42 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 96838 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERGIC1-KCNIP1 ERGIC1 chr5 172834433 + KCNIP1 chr5 170718758 + Exonic hg38 OV TCGA-20-1684-01A 52 62 Out-of-frame Intra-chr q35.1 q35.1 Seq+ 96839 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLG1-CFDP1 GLG1 chr16 74467756 - CFDP1 chr16 75305182 - Exonic hg38 OV TCGA-20-1684-01A 46 22 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 96840 ChimerSeq TCGA FAWG TCGA_RNA-Seq C9orf3-MFSD14B C9orf3 chr9 95082719 + MFSD14B chr9 94429189 + Exonic hg38 OV TCGA-20-1684-01A 27 21 Out-of-frame Intra-chr q22.32 q22.32 96841 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNA2D3-DAP3 CACNA2D3 chr3 54642241 + DAP3 chr1 155738157 + Exonic hg38 OV TCGA-20-1684-01A 29 13 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q22 Seq+ 96842 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSF1-KCTD21 RSF1 chr11 77820528 - KCTD21 chr11 78174583 - Exonic hg38 OV TCGA-20-1684-01A 28 12 CDS-5'UTR Intra-chr q14.1 q14.1 Seq+ 96843 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF276-JPH3 ZNF276 chr16 89723709 + JPH3 chr16 87696580 + Exonic hg38 OV TCGA-20-1684-01A 22 14 Out-of-frame Intra-chr q24.3 Transcription factor q24.2 Seq+ 96844 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMF1-ABRA PSMF1 chr20 1118902 + ABRA chr8 106761514 - Exonic hg38 OV TCGA-20-1684-01A 17 9 Out-of-frame Inter-chr p13 q23.1 Seq+ 96845 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRK-TARID PTPRK chr6 128322039 - TARID chr6 133845951 - Exonic hg38 OV TCGA-20-1684-01A 13 16 5'UTR-3'UTR Intra-chr Tumor suppressor gene q23.2 96846 ChimerSeq TCGA FAWG TCGA_RNA-Seq JMJD1C-CTNNA3 JMJD1C chr10 63380318 - CTNNA3 chr10 66775524 - Exonic hg38 OV TCGA-20-1684-01A 15 5 In-Frame Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 96847 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNC2H1-YAP1 DYNC2H1 chr11 103283085 + YAP1 chr11 102162456 + Exonic hg38 OV TCGA-20-1684-01A 12 10 Out-of-frame Intra-chr q22.3 q22.1 Tumor suppressor gene Seq+ 96848 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXJ3-LRRC41 FOXJ3 chr1 42227883 - LRRC41 chr1 46298370 - Exonic hg38 OV TCGA-20-1684-01A 13 5 Out-of-frame Intra-chr p34.2 Transcription factor p33 Seq+ 96849 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHIC2-SPINK2 CHIC2 chr4 54048955 - SPINK2 chr4 56820579 - Exonic hg38 OV TCGA-20-1684-01A 9 12 Out-of-frame Intra-chr q12 q12 Seq+ 96850 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRG4-LINGO1 NRG4 chr15 76009200 - LINGO1 chr15 77796053 - Exonic hg38 OV TCGA-20-1684-01A 10 7 CDS-5'UTR Intra-chr q24.2 q24.3 Seq+ 96851 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG4C-NFIA ATG4C chr1 62805255 + NFIA chr1 61332512 + Exonic hg38 OV TCGA-20-1684-01A 10 6 In-Frame Intra-chr p31.3 p31.3 Transcription factor Seq+ 96852 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSP90B1-TEX261 HSP90B1 chr12 103930564 + TEX261 chr2 70991983 - Exonic hg38 OV TCGA-20-1685-01A 113 6 Out-of-frame Inter-chr q23.3 Tumor suppressor gene p13.3 Seq+ 96853 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK2AP1-KCNQ1 CDK2AP1 chr12 123271564 - KCNQ1 chr11 2768844 + Exonic hg38 OV TCGA-20-1685-01A 35 8 CDS-3'UTR Inter-chr q24.31 Tumor suppressor gene p15.5 Seq+ 96854 ChimerSeq TCGA FAWG TCGA_RNA-Seq PML-AGBL3 PML chr15 73994941 + AGBL3 chr7 135134841 + Exonic hg38 OV TCGA-20-1685-01A 34 4 In-Frame Inter-chr q24.1 Oncogene Tumor suppressor gene q33 Seq+ 96855 ChimerSeq TCGA FAWG TCGA_RNA-Seq MID1-SPAG17 MID1 chrX 10482480 - SPAG17 chr1 118055914 - Exonic hg38 OV TCGA-20-1685-01A 21 4 In-Frame Inter-chr p22.2 p12 Seq+ 96856 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC6B-SCGB1B2P TNRC6B chr22 40212060 + SCGB1B2P chr19 34577695 - Exonic hg38 OV TCGA-20-1686-01A 88 8 Out-of-frame Inter-chr q13.1 q13.11 Seq+ 96857 ChimerSeq TCGA FAWG TCGA_RNA-Seq LYPLA1-TPD52 LYPLA1 chr8 54100908 - TPD52 chr8 80042668 - Exonic hg38 OV TCGA-20-1686-01A 72 7 In-Frame Intra-chr q11.23 q21.13 Seq+ 96858 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOS2-AATF NOS2 chr17 27780767 - AATF chr17 37056601 + Exonic hg38 OV TCGA-20-1686-01A 48 1 CDS-3'UTR Intra-chr q11.2 Seq+ 96859 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD3-LSM1 NSD3 chr8 38381799 - LSM1 chr8 38163840 - Exonic hg38 OV TCGA-20-1686-01A 13 0 5'UTR-CDS Intra-chr p11.23 Tumor suppressor gene p11.23 96860 ChimerSeq TCGA FAWG TCGA_RNA-Seq TADA2A-SPACA3 TADA2A chr17 37423615 + SPACA3 chr17 32975827 + Exonic hg38 OV TCGA-20-1686-01A 12 1 3'UTR-5'UTR Intra-chr q12 q11.2 Seq+ 96861 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKAP1-NQO2 SKAP1 chr17 48345905 - NQO2 chr6 2993931 + Exonic hg38 OV TCGA-20-1687-01A 29 11 CDS-5'UTR Inter-chr q21.32 p25.2 Seq+ 96862 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTYH2-APOO TTYH2 chr17 74230999 + APOO chrX 23840377 - Exonic hg38 OV TCGA-20-1687-01A 21 2 In-Frame Inter-chr q25.1 p22.11 Seq+ 96863 ChimerSeq TCGA FAWG TCGA_RNA-Seq C19orf43-ASNA1 C19orf43 chr19 12734313 - ASNA1 chr19 12745377 + Exonic hg38 OV TCGA-20-1687-01A 8 1 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 96864 ChimerSeq TCGA FAWG TCGA_RNA-Seq YWHAH-DEPDC5 YWHAH chr22 31944820 + DEPDC5 chr22 31901742 + Exonic hg38 OV TCGA-23-1022-01A 59 16 Out-of-frame Intra-chr q12.3 q12.2 Seq+ 96865 ChimerSeq TCGA FAWG TCGA_RNA-Seq YPEL1-MAPK1 YPEL1 chr22 21735615 - MAPK1 chr22 21807846 - Exonic hg38 OV TCGA-23-1022-01A 16 1 5'UTR-CDS Intra-chr q11.22 q11.22 Oncogene Seq+ 96866 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM266-SMAD6 TMEM266 chr15 76160168 + SMAD6 chr15 66780997 + Exonic hg38 OV TCGA-23-1022-01A 14 3 Out-of-frame Intra-chr q24.2 q22.31 96867 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARPC3-APAF1 ARPC3 chr12 110445452 - APAF1 chr12 98732420 + Exonic hg38 OV TCGA-23-1022-01A 11 2 In-Frame Intra-chr q24.11 q23.1 Tumor suppressor gene Seq+ 96868 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM61-PHLDA3 TMEM61 chr1 54981080 + PHLDA3 chr1 201466178 - Exonic hg38 OV TCGA-23-1024-01A 38 15 CDS-3'UTR Intra-chr p32.3 q32.1 Tumor suppressor gene Seq+ 96869 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF350-SLC12A5 ZNF350 chr19 51974346 - SLC12A5 chr20 46040373 + Exonic hg38 OV TCGA-23-1024-01A 13 20 In-Frame Inter-chr q13.41 Transcription factor q13.12 Seq+ 96870 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC6A6-TMEM43 SLC6A6 chr3 14402847 + TMEM43 chr3 14130822 + Exonic hg38 OV TCGA-23-1024-01A 15 7 Out-of-frame Intra-chr p25.1 p25.1 96871 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOA-AS2 RHOA chr3 49375434 - AS2 chr3 49551442 - Exonic hg38 OV TCGA-23-1024-01A 13 12 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene 96872 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOA-ARCN1 RHOA chr3 49411820 - ARCN1 chr11 118581246 + Exonic hg38 OV TCGA-23-1024-01A 9 5 5'UTR-CDS Inter-chr p21.31 Oncogene Tumor suppressor gene q23.3 Seq+ 96873 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALT1-STRA8 B4GALT1 chr9 33166758 - STRA8 chr7 135240519 + Exonic hg38 OV TCGA-23-1026-01B 44 9 CDS-5'UTR Inter-chr p21.1 q33 Seq+ 96874 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L1-CNBD2 EPB41L1 chr20 36112480 + CNBD2 chr20 36030357 + Exonic hg38 OV TCGA-23-1026-01B 22 5 5'UTR-5'UTR Intra-chr q11.23 q11.23 Seq+ 96875 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-CACNG6 BCAS3 chr17 60947352 + CACNG6 chr19 54011951 + Exonic hg38 OV TCGA-23-1026-01B 20 8 Out-of-frame Inter-chr q23.2 q13.42 Seq+ 96876 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1109-FSIP2 KIAA1109 chr4 122289192 + FSIP2 chr2 185828156 + Exonic hg38 OV TCGA-23-1028-01A 28 6 In-Frame Inter-chr q27 q32.1 Seq+ 96877 ChimerSeq TCGA FAWG TCGA_RNA-Seq NECTIN2-BCAM NECTIN2 chr19 44846613 + BCAM chr19 44811225 + Exonic hg38 OV TCGA-23-1028-01A 24 8 In-Frame Intra-chr q13.32 q13.32 96878 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHST11-HSP90B1 CHST11 chr12 104601991 + HSP90B1 chr12 103939509 + Exonic hg38 OV TCGA-23-1028-01A 11 6 In-Frame Intra-chr q23.3 q23.3 Tumor suppressor gene Seq+ 96879 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-TRIM29 UVRAG chr11 75861780 + TRIM29 chr11 120112476 - Exonic hg38 OV TCGA-23-1030-01A 494 180 In-Frame Intra-chr q13.5 Tumor suppressor gene q23.3 Seq+ 96880 ChimerSeq TCGA FAWG TCGA_RNA-Seq MROH1-XRCC5 MROH1 chr8 144200541 + XRCC5 chr2 216190225 + Exonic hg38 OV TCGA-23-1030-01A 87 20 In-Frame Inter-chr q24.3 q35 Tumor suppressor gene Seq+ 96881 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5370375 - RNF216 chr7 5652510 - Exonic hg38 OV TCGA-23-1030-01A 17 5 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 96882 ChimerSeq TCGA FAWG TCGA_RNA-Seq HELZ2-GMEB2 HELZ2 chr20 63566084 - GMEB2 chr20 63590429 - Exonic hg38 OV TCGA-23-1030-01A 16 8 Out-of-frame Intra-chr q13.33 q13.33 Transcription factor Seq+ 96883 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP6-HEBP1 LRP6 chr12 12148942 - HEBP1 chr12 12975479 - Exonic hg38 OV TCGA-23-1030-01A 16 5 5'UTR-CDS Intra-chr p13.1 Seq+ 96884 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBFOX2-CACNG2 RBFOX2 chr22 35938847 - CACNG2 chr22 36587548 - Exonic hg38 OV TCGA-23-1030-01A 16 3 5'UTR-CDS Intra-chr q12.3 Seq+ 96885 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGB4-RECQL5 ITGB4 chr17 75730947 + RECQL5 chr17 75630486 - Exonic hg38 OV TCGA-23-1030-01A 11 5 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 96886 ChimerSeq TCGA FAWG TCGA_RNA-Seq MUC16-ZC3H4 MUC16 chr19 8961775 - ZC3H4 chr19 47065502 - Exonic hg38 OV TCGA-23-1032-01A 343 114 Out-of-frame Intra-chr p13.2 q13.32 Seq+ 96887 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCBP2-TIMELESS PCBP2 chr12 53460659 + TIMELESS chr12 56430304 - Exonic hg38 OV TCGA-23-1032-01A 66 5 Out-of-frame Intra-chr q13.13 q13.3 Seq+ 96888 ChimerSeq TCGA FAWG TCGA_RNA-Seq HPN-ABCG1 HPN chr19 35049516 + ABCG1 chr21 42284560 + Exonic hg38 OV TCGA-23-1032-01A 25 14 Out-of-frame Inter-chr q13.11 q22.3 Seq+ 96889 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN17-SFXN1 TSPAN17 chr5 176656956 + SFXN1 chr5 175511451 + Exonic hg38 OV TCGA-23-1032-01A 24 12 In-Frame Intra-chr q35.2 q35.2 Seq+ 96890 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP7A-COX7B ATP7A chrX 77910835 + COX7B chrX 77899477 + Exonic hg38 OV TCGA-23-1032-01A 22 15 5'UTR-5'UTR Intra-chr q21.1 q21.1 96891 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEAT1-TIGD3 NEAT1 chr11 65436666 + TIGD3 chr11 65355793 + Exonic hg38 OV TCGA-23-1107-01A 41 22 5'UTR-5'UTR Intra-chr q13.1 q13.1 Transcription factor Seq+ 96892 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGM2L1-C1orf61 PGM2L1 chr11 74368492 - C1orf61 chr1 156414753 - Exonic hg38 OV TCGA-23-1107-01A 32 16 Out-of-frame Inter-chr q13.4 q22 Seq+ 96893 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM129B-C9orf50 FAM129B chr9 127568820 - C9orf50 chr9 129613251 - Exonic hg38 OV TCGA-23-1107-01A 20 15 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 96894 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAST2-PSMA5 MAST2 chr1 45882395 + PSMA5 chr1 109402090 - Exonic hg38 OV TCGA-23-1107-01A 17 7 Out-of-frame Intra-chr p34.1 AGC:MAST p13.3 Seq+ 96895 ChimerSeq TCGA FAWG TCGA_RNA-Seq HTT-ZFYVE28 HTT chr4 3182470 + ZFYVE28 chr4 2343203 - Exonic hg38 OV TCGA-23-1109-01A 29 8 CDS-5'UTR Intra-chr p16.3 p16.3 Seq+ 96896 ChimerSeq TCGA FAWG TCGA_RNA-Seq IP6K2-COL7A1 IP6K2 chr3 48715389 - COL7A1 chr3 48585975 - Exonic hg38 OV TCGA-23-1110-01A 9 5 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 96897 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEF1D-TSNARE1 EEF1D chr8 143597348 - TSNARE1 chr8 142232001 - Exonic hg38 OV TCGA-23-1110-01A 3 3 5'UTR-CDS Intra-chr q24.3 Seq+ 96898 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDT-PAK1 DDT chr22 23973768 - PAK1 chr11 77355842 - Exonic hg38 OV TCGA-23-1110-01A 1 3 5'UTR-CDS Inter-chr q14.1 STE:STE20 Seq+ 96899 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCBP2-TNFRSF1A PCBP2 chr12 53465973 + TNFRSF1A chr12 6334244 - Exonic hg38 OV TCGA-23-1111-01A 36 15 In-Frame Intra-chr q13.13 p13.31 Seq+ 96900 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD3-ZPBP2 PSMD3 chr17 39986712 + ZPBP2 chr17 39870694 + Exonic hg38 OV TCGA-23-1111-01A 26 0 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 96901 ChimerSeq TCGA FAWG TCGA_RNA-Seq POC1A-TNNC1 POC1A chr3 52122379 - TNNC1 chr3 52452513 - Exonic hg38 OV TCGA-23-1111-01A 24 2 In-Frame Intra-chr p21.2 p21.1 Seq+ 96902 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPECC1L-MKL1 SPECC1L chr22 24347176 + MKL1 chr22 40424381 - Exonic hg38 OV TCGA-23-1111-01A 21 6 Out-of-frame Intra-chr q11.23 q13.2 Seq+ 96903 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS6-DCBLD2 INTS6 chr13 51451025 - DCBLD2 chr3 98881767 - Exonic hg38 OV TCGA-23-1114-01B 66 11 Out-of-frame Inter-chr q14.3 Tumor suppressor gene q12.1 Seq+ 96904 ChimerSeq TCGA FAWG TCGA_RNA-Seq ORC2-CPEB1 ORC2 chr2 200963490 - CPEB1 chr15 82571532 - Exonic hg38 OV TCGA-23-1114-01B 13 0 5'UTR-5'UTR Inter-chr q33.1 q25.2 Transcription factor Seq+ 96905 ChimerSeq TCGA FAWG TCGA_RNA-Seq RYBP-ROBO2 RYBP chr3 72446496 - ROBO2 chr3 77477414 + Exonic hg38 OV TCGA-23-1114-01B 8 7 5'UTR-5'UTR Intra-chr p12.3 Seq+ 96906 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP1G1-NT5DC1 AP1G1 chr16 71808763 - NT5DC1 chr6 116221054 + Exonic hg38 OV TCGA-23-1116-01A 15 1 5'UTR-CDS Inter-chr q22.2 q22.1 Seq+ 96907 ChimerSeq TCGA FAWG TCGA_RNA-Seq EVPL-SRP68 EVPL chr17 76017739 - SRP68 chr17 76050526 - Exonic hg38 OV TCGA-23-1116-01A 14 2 In-Frame Intra-chr q25.1 q25.1 Seq+ 96908 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPPL3-IL31 SPPL3 chr12 120810809 - IL31 chr12 122172741 - Exonic hg38 OV TCGA-23-1116-01A 5 3 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 96909 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPTC7-GPN3 PPTC7 chr12 110582809 - GPN3 chr12 110465214 - Exonic hg38 OV TCGA-23-1116-01A 4 2 Out-of-frame Intra-chr q24.11 q24.11 Seq+ 96910 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK4-CACNG6 PAK4 chr19 39125919 + CACNG6 chr19 53998239 + Exonic hg38 OV TCGA-23-1118-01A 9 5 5'UTR-5'UTR Intra-chr q13.2 STE:STE20 q13.42 Seq+ 96911 ChimerSeq TCGA FAWG TCGA_RNA-Seq ILF3-WNT5B ILF3 chr19 10681130 + WNT5B chr12 1574668 + Exonic hg38 OV TCGA-23-1118-01A 9 1 CDS-5'UTR Inter-chr p13.2 p13.33 Seq+ 96912 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF7-MAP3K3 DCAF7 chr17 63550815 + MAP3K3 chr17 63652557 + Exonic hg38 OV TCGA-23-1118-01A 7 1 Out-of-frame Intra-chr q23.3 q23.3 STE:STE11 Seq+ 96913 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKACA-ASF1B PRKACA chr19 14117502 - ASF1B chr19 14126237 - Exonic hg38 OV TCGA-23-1118-01A 5 3 In-Frame Intra-chr p13.12 p13.12 Seq+ 96914 ChimerSeq TCGA FAWG TCGA_RNA-Seq VTCN1-DNM2 VTCN1 chr1 117210824 - DNM2 chr19 10772479 + Exonic hg38 OV TCGA-23-1119-01A 20 46 Out-of-frame Inter-chr p12 p13.2 Seq+ 96915 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBCK1-MYO18A RBCK1 chr20 408779 + MYO18A chr17 29074914 - Exonic hg38 OV TCGA-23-1120-01A 195 68 In-Frame Inter-chr p13 Transcription factor q11.2 Oncogene Seq+ 96916 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBCK1-TIAF1 RBCK1 chr20 408779 + TIAF1 chr17 29074914 - Exonic hg38 OV TCGA-23-1120-01A 195 64 5'UTR-5'UTR Inter-chr p13 Transcription factor q11.2 Oncogene Seq+ 96917 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRMT1-PTOV1 PRMT1 chr19 49680588 + PTOV1 chr19 49858549 + Exonic hg38 OV TCGA-23-1120-01A 185 57 In-Frame Intra-chr q13.33 q13.33 Seq+ 96918 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL35A-LPP RPL35A chr3 197954147 + LPP chr3 188484592 + Exonic hg38 OV TCGA-23-1120-01A 49 28 Out-of-frame Intra-chr q29 q27.3 Oncogene Seq+ 96919 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPP-CASR LPP chr3 188484704 + CASR chr3 122253948 + Exonic hg38 OV TCGA-23-1120-01A 41 7 CDS-5'UTR Intra-chr q27.3 Oncogene q13.33 Seq+ 96920 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAP-ELP6 SCAP chr3 47475799 - ELP6 chr3 47511226 - Exonic hg38 OV TCGA-23-1120-01A 11 2 5'UTR-5'UTR Intra-chr p21.31 p21.31 Seq+ 96921 ChimerSeq TCGA FAWG TCGA_RNA-Seq LGR6-RNPEP LGR6 chr1 202194201 + RNPEP chr1 201996147 + Exonic hg38 OV TCGA-23-1122-01A 42 19 In-Frame Intra-chr q32.1 q32.1 Seq+ 96922 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN14-ANKRD44 PTPN14 chr1 214364512 - ANKRD44 chr2 196967446 - Exonic hg38 OV TCGA-23-1122-01A 40 15 CDS-3'UTR Inter-chr q41 q33.1 Seq+ 96923 ChimerSeq TCGA FAWG TCGA_RNA-Seq UTRN-TBC1D31 UTRN chr6 144840832 + TBC1D31 chr8 123150036 + Exonic hg38 OV TCGA-23-1122-01A 32 18 In-Frame Inter-chr q24.2 q24.13 Seq+ 96924 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM94-TTYH2 TMEM94 chr17 75456751 + TTYH2 chr17 74230888 + Exonic hg38 OV TCGA-23-1122-01A 21 21 5'UTR-CDS Intra-chr q25.1 q25.1 96925 ChimerSeq TCGA FAWG TCGA_RNA-Seq IKBIP-NR2C1 IKBIP chr12 98634296 - NR2C1 chr12 95051943 - Exonic hg38 OV TCGA-23-1122-01A 12 4 In-Frame Intra-chr q23.1 q22 Transcription factor Seq+ 96926 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM3A-SUCLG2 KDM3A chr2 86442233 + SUCLG2 chr3 67609596 - Exonic hg38 OV TCGA-23-1122-01A 9 7 In-Frame Inter-chr p11.2 Tumor suppressor gene p14.1 Seq+ 96927 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD1-PCDHB15 NSD1 chr5 177239865 + PCDHB15 chr5 141245483 + Exonic hg38 OV TCGA-23-1122-01A 7 12 CDS-5'UTR Intra-chr q35.3 Oncogene q31.3 96928 ChimerSeq TCGA FAWG TCGA_RNA-Seq LSM7-GNG7 LSM7 chr19 2328387 - GNG7 chr19 2520725 - Exonic hg38 OV TCGA-23-1123-01A 113 135 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 96929 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP3-RAD18 SRGAP3 chr3 9248885 - RAD18 chr3 8941804 - Exonic hg38 OV TCGA-23-1123-01A 45 12 Out-of-frame Intra-chr p25.3 Tumor suppressor gene p25.3 Seq+ 96930 ChimerSeq TCGA FAWG TCGA_RNA-Seq PANK2-HSPA12B PANK2 chr20 3889728 + HSPA12B chr20 3738658 + Exonic hg38 OV TCGA-23-1123-01A 34 17 5'UTR-5'UTR Intra-chr p13 p13 Seq+ 96931 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD2-YIPF7 NSD2 chr4 1961151 + YIPF7 chr4 44650101 - Exonic hg38 OV TCGA-23-1123-01A 21 16 Out-of-frame Intra-chr p16.3 p12 96932 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A42-SUGP2 SLC25A42 chr19 19064115 + SUGP2 chr19 19008428 - Exonic hg38 OV TCGA-23-1123-01A 11 9 5'UTR-CDS Intra-chr p13.11 p13.11 Seq+ 96933 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH1-SPTAN1 NOTCH1 chr9 136496230 - SPTAN1 chr9 128624328 + Exonic hg38 OV TCGA-23-1123-01A 11 2 In-Frame Intra-chr q34.3 Oncogene Tumor suppressor gene q34.11 Seq+ 96934 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPLOC4-FASN NPLOC4 chr17 81597245 - FASN chr17 82084953 - Exonic hg38 OV TCGA-23-1123-01A 10 6 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 96935 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC1-PTP4A1P1 TANC1 chr2 159227965 + PTP4A1P1 chr2 158065863 + Exonic hg38 OV TCGA-23-1809-01A 9 8 Out-of-frame Intra-chr q24.2 q24.1 Seq+ 96936 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTCH2-FHIT MTCH2 chr11 47638699 - FHIT chr3 59752321 - Exonic hg38 OV TCGA-23-2077-01A 422 80 5'UTR-CDS Inter-chr p11.2 p14.2 Tumor suppressor gene Seq+ 96937 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP9X-DDX3X USP9X chrX 41086109 + DDX3X chrX 41364274 + Exonic hg38 OV TCGA-23-2077-01A 98 9 5'UTR-5'UTR Intra-chr p11.4 Oncogene p11.4 Tumor suppressor gene KB Pub Seq+ 96938 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM160A2-APBB1 FAM160A2 chr11 6234544 - APBB1 chr11 6411361 - Exonic hg38 OV TCGA-23-2077-01A 37 34 5'UTR-5'UTR Intra-chr p15.4 p15.4 Seq+ 96939 ChimerSeq TCGA FAWG TCGA_RNA-Seq E2F3-WRNIP1 E2F3 chr6 20403832 + WRNIP1 chr6 2779263 + Exonic hg38 OV TCGA-23-2077-01A 20 2 Out-of-frame Intra-chr p22.3 Tumor suppressor gene Transcription factor p25.2 Seq+ 96940 ChimerSeq TCGA FAWG TCGA_RNA-Seq NR2F6-ABHD8 NR2F6 chr19 17244943 - ABHD8 chr19 17301624 - Exonic hg38 OV TCGA-23-2077-01A 14 6 CDS-5'UTR Intra-chr p13.11 Transcription factor p13.11 Seq+ 96941 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO2-DCP1B ANO2 chr12 5827769 - DCP1B chr12 1967910 - Exonic hg38 OV TCGA-23-2077-01A 9 0 CDS-5'UTR Intra-chr p13.31 p13.33 Seq+ 96942 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK2-BTNL2 ROCK2 chr2 11211681 - BTNL2 chr6 32401805 - Exonic hg38 OV TCGA-23-2077-01A 9 0 CDS-3'UTR Inter-chr p25.1 AGC:DMPK 96943 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNG12-CYP4X1 GNG12 chr1 67777458 - CYP4X1 chr1 47029990 + Exonic hg38 OV TCGA-23-2077-01A 7 2 5'UTR-5'UTR Intra-chr p31.3 p33 96944 ChimerSeq TCGA FAWG TCGA_RNA-Seq WASF2-FGR WASF2 chr1 27489986 - FGR chr1 27625151 - Exonic hg38 OV TCGA-23-2078-01A 48 8 5'UTR-5'UTR Intra-chr p36.11 p35.3 TK:Src Seq+ 96945 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC3-IL10RB TTC3 chr21 37073473 + IL10RB chr21 33283094 + Exonic hg38 OV TCGA-23-2078-01A 20 8 5'UTR-CDS Intra-chr q22.13 q22.11 Seq+ 96946 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAPTM4B-CPQ LAPTM4B chr8 97776108 + CPQ chr8 97143020 + Exonic hg38 OV TCGA-23-2078-01A 17 4 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 96947 ChimerSeq TCGA FAWG TCGA_RNA-Seq MORC3-IL10RB MORC3 chr21 36338921 + IL10RB chr21 33283094 + Exonic hg38 OV TCGA-23-2078-01A 14 4 Out-of-frame Intra-chr q22.12 q22.11 Seq+ 96948 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPM-KDM4B HNRNPM chr19 8474244 + KDM4B chr19 5016257 + Exonic hg38 OV TCGA-23-2078-01A 10 3 CDS-5'UTR Intra-chr p13.2 p13.3 Seq+ 96949 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP5C1-TAF3 ATP5C1 chr10 7788263 + TAF3 chr10 7963920 + Exonic hg38 OV TCGA-23-2081-01A 64 9 Out-of-frame Intra-chr p14 p14 Seq+ 96950 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTAN1-SLC34A3 SPTAN1 chr9 128627044 + SLC34A3 chr9 137236346 + Exonic hg38 OV TCGA-23-2084-01A 80 44 Out-of-frame Intra-chr q34.11 q34.3 Seq+ 96951 ChimerSeq TCGA FAWG TCGA_RNA-Seq JADE1-C4orf33 JADE1 chr4 128852268 + C4orf33 chr4 129102602 + Exonic hg38 OV TCGA-23-2084-01A 16 7 CDS-5'UTR Intra-chr q28.2 q28.2 96952 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBFB-GSE1 CBFB chr16 67082308 + GSE1 chr16 85171589 + Exonic hg38 OV TCGA-23-2084-01A 16 3 CDS-5'UTR Intra-chr q22.1 q24.1 96953 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIXDC1-ARCN1 DIXDC1 chr11 111937559 + ARCN1 chr11 118592709 + Exonic hg38 OV TCGA-23-2084-01A 14 4 In-Frame Intra-chr q23.1 q23.3 Seq+ 96954 ChimerSeq TCGA FAWG TCGA_RNA-Seq DVL2-TMEM256 DVL2 chr17 7226421 - TMEM256 chr17 7403689 - Exonic hg38 OV TCGA-24-0966-01A 8 5 CDS-5'UTR Intra-chr p13.1 Seq+ 96955 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRCH3-SLC16A13 LRCH3 chr3 197791540 + SLC16A13 chr17 7039763 + Exonic hg38 OV TCGA-24-0968-01A 42 3 In-Frame Inter-chr q29 p13.1 Seq+ 96956 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPLOC4-RBPMS2 NPLOC4 chr17 81629725 - RBPMS2 chr15 64741242 - Exonic hg38 OV TCGA-24-0968-01A 38 5 In-Frame Inter-chr q25.3 q22.31 Seq+ 96957 ChimerSeq TCGA FAWG TCGA_RNA-Seq AREL1-TMED10 AREL1 chr14 74692041 - TMED10 chr14 75135886 - Exonic hg38 OV TCGA-24-0968-01A 13 4 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 96958 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLPH3L-THEM4 GOLPH3L chr1 150661814 - THEM4 chr1 151889373 - Exonic hg38 OV TCGA-24-0968-01A 12 1 In-Frame Intra-chr q21.3 q21.3 Seq+ 96959 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0907-CCT3 KIAA0907 chr1 155916625 - CCT3 chr1 156319017 - Exonic hg38 OV TCGA-24-0968-01A 8 4 Out-of-frame Intra-chr q22 q22 96960 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO3B-TSHZ2 MYO3B chr2 170236136 + TSHZ2 chr20 53487144 + Exonic hg38 OV TCGA-24-0968-01A 3 0 CDS-3'UTR Inter-chr q31.1 STE:STE20 q13.2 Transcription factor Seq+ 96961 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYT7-AHNAK SYT7 chr11 61580790 - AHNAK chr11 62491831 - Exonic hg38 OV TCGA-24-0970-01B 238 68 Out-of-frame Intra-chr q12.2 q12.3 Tumor suppressor gene Seq+ 96962 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1XR1-MAST3 TBL1XR1 chr3 177197121 - MAST3 chr19 18134579 + Exonic hg38 OV TCGA-24-0970-01B 45 29 5'UTR-CDS Inter-chr q26.32 p13.11 AGC:MAST Seq+ 96963 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-FAM168A UVRAG chr11 75861780 + FAM168A chr11 73468492 - Exonic hg38 OV TCGA-24-0970-01B 21 14 CDS-5'UTR Intra-chr q13.5 Tumor suppressor gene q13.4 Seq+ 96964 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2Z-NPEPPS UBE2Z chr17 48916187 + NPEPPS chr17 47596353 + Exonic hg38 OV TCGA-24-0970-01B 19 9 Out-of-frame Intra-chr q21.32 q21.32 Seq+ 96965 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOLLIP-AP2A2 TOLLIP chr11 1309466 - AP2A2 chr11 972062 + Exonic hg38 OV TCGA-24-0970-01B 19 7 CDS-3'UTR Intra-chr p15.5 p15.5 Seq+ 96966 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACADS-PRKAB1 ACADS chr12 120727189 + PRKAB1 chr12 119673964 + Exonic hg38 OV TCGA-24-0970-01B 16 12 Out-of-frame Intra-chr q24.31 q24.23 Seq+ 96967 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNK1-IQSEC3 WNK1 chr12 754324 + IQSEC3 chr12 138267 + Exonic hg38 OV TCGA-24-0970-01B 17 7 In-Frame Intra-chr p13.33 Seq+ 96968 ChimerSeq TCGA FAWG TCGA_RNA-Seq LLGL2-TMEM104 LLGL2 chr17 75572064 + TMEM104 chr17 74835927 + Exonic hg38 OV TCGA-24-0970-01B 13 5 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 96969 ChimerSeq TCGA FAWG TCGA_RNA-Seq CALML4-ITGA11 CALML4 chr15 68197440 - ITGA11 chr15 68321503 - Exonic hg38 OV TCGA-24-0970-01B 12 5 Out-of-frame Intra-chr q23 q23 Seq+ 96970 ChimerSeq TCGA FAWG TCGA_RNA-Seq NECTIN2-BCAM NECTIN2 chr19 44865660 + BCAM chr19 44818522 + Exonic hg38 OV TCGA-24-0970-01B 10 4 In-Frame Intra-chr q13.32 q13.32 96971 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK4-PKIG STK4 chr20 45001353 + PKIG chr20 44614534 + Exonic hg38 OV TCGA-24-0970-01B 8 6 CDS-5'UTR Intra-chr q13.12 q13.12 Seq+ 96972 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD11-PARVA ANKRD11 chr16 89418284 - PARVA chr11 12473745 + Exonic hg38 OV TCGA-24-0982-01A 8 2 5'UTR-CDS Inter-chr q24.3 p15.3 Seq+ 96973 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMYM4-AP2S1 ZMYM4 chr1 35399576 + AP2S1 chr19 46846142 - Exonic hg38 OV TCGA-24-1103-01A 44 14 In-Frame Inter-chr p34.3 q13.32 Seq+ 96974 ChimerSeq TCGA FAWG TCGA_RNA-Seq HRH1-SLC6A11 HRH1 chr3 11154554 + SLC6A11 chr3 10912090 + Exonic hg38 OV TCGA-24-1103-01A 29 0 5'UTR-CDS Intra-chr p25.3 p25.3 Seq+ 96975 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARSG-AP2B1 ARSG chr17 68370524 + AP2B1 chr17 35717195 + Exonic hg38 OV TCGA-24-1103-01A 13 2 In-Frame Intra-chr q24.2 q12 Seq+ 96976 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHSY3-NINJ2 CHSY3 chr5 129908360 + NINJ2 chr12 566178 - Exonic hg38 OV TCGA-24-1104-01A 392 111 In-Frame Inter-chr q23.3 p13.33 Seq+ 96977 ChimerSeq TCGA FAWG TCGA_RNA-Seq PNKD-ARPC2 PNKD chr2 218272681 + ARPC2 chr2 218228737 + Exonic hg38 OV TCGA-24-1104-01A 20 8 Out-of-frame Intra-chr q35 q35 Seq+ 96978 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPN2-KDF1 GPN2 chr1 26888969 - KDF1 chr1 26950151 - Exonic hg38 OV TCGA-24-1104-01A 16 4 In-Frame Intra-chr p36.11 p36.11 96979 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSNARE1-LY6D TSNARE1 chr8 142403104 - LY6D chr8 142785687 - Exonic hg38 OV TCGA-24-1105-01A 83 14 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 96980 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF41-MYO1C RNF41 chr12 56216429 - MYO1C chr17 1482558 - Exonic hg38 OV TCGA-24-1105-01A 38 16 5'UTR-CDS Inter-chr q13.3 p13.3 Seq+ 96981 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB34-NUFIP2 RAB34 chr17 28717213 - NUFIP2 chr17 29267530 - Exonic hg38 OV TCGA-24-1416-01A 10 3 In-Frame Intra-chr q11.2 q11.2 Seq+ 96982 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC148-GCG CCDC148 chr2 158456415 - GCG chr2 162149187 - Exonic hg38 OV TCGA-24-1417-01A 16 9 5'UTR-5'UTR Intra-chr q24.1 q24.2 Seq+ 96983 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHDC10-SND1 KLHDC10 chr7 130129576 + SND1 chr7 127807484 + Exonic hg38 OV TCGA-24-1417-01A 16 4 In-Frame Intra-chr q32.2 q32.1 Seq+ 96984 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF578-SIGLEC20P ZNF578 chr19 52456958 + SIGLEC20P chr19 51184963 + Exonic hg38 OV TCGA-24-1417-01A 10 24 Out-of-frame Intra-chr q13.41 Transcription factor q13.41 Seq+ 96985 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAP1L4-CFTR NAP1L4 chr11 2951259 - CFTR chr7 117587739 + Exonic hg38 OV TCGA-24-1417-01A 8 10 5'UTR-CDS Inter-chr q31.2 Tumor suppressor gene Seq+ 96986 ChimerSeq TCGA FAWG TCGA_RNA-Seq MFSD6-PMS1 MFSD6 chr2 190469855 + PMS1 chr2 189873496 + Exonic hg38 OV TCGA-24-1417-01A 5 5 In-Frame Intra-chr q32.2 q32.2 Oncogene Seq+ 96987 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP3-ATP2B2 SRGAP3 chr3 9248885 - ATP2B2 chr3 10534133 - Exonic hg38 OV TCGA-24-1417-01A 5 5 CDS-5'UTR Intra-chr p25.3 Tumor suppressor gene p25.3 Seq+ 96988 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWC1-RARS WWC1 chr5 168292271 + RARS chr5 168500591 + Exonic hg38 OV TCGA-24-1418-01A 7 4 Out-of-frame Intra-chr q34 q34 Seq+ 96989 ChimerSeq TCGA FAWG TCGA_RNA-Seq AAK1-C2orf42 AAK1 chr2 69556860 - C2orf42 chr2 70150564 - Exonic hg38 OV TCGA-24-1423-01A 335 134 Out-of-frame Intra-chr p13.3 Other:NAK p13.3 Seq+ 96990 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICU1-TSPAN15 MICU1 chr10 72475100 - TSPAN15 chr10 69483691 + Exonic hg38 OV TCGA-24-1423-01A 24 10 In-Frame Intra-chr q22.1 q22.1 Seq+ 96991 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMFR-BBS2 AMFR chr16 56401733 - BBS2 chr16 56484867 - Exonic hg38 OV TCGA-24-1423-01A 11 7 Out-of-frame Intra-chr q13 q13 Seq+ 96992 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR2-USP10 FGFR2 chr10 121593709 - USP10 chr16 84758716 + Exonic hg38 OV TCGA-24-1424-01A 249 86 In-Frame Inter-chr q26.13 TK:FGFR Oncogene q24.1 Seq+ 96993 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUPL2-EPCAM NUPL2 chr7 23182206 + EPCAM chr2 47377014 + Exonic hg38 OV TCGA-24-1424-01A 52 50 Out-of-frame Inter-chr p15.3 p21 Seq+ 96994 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAH17-NCAN DNAH17 chr17 78507278 - NCAN chr19 19216947 + Exonic hg38 OV TCGA-24-1424-01A 37 32 CDS-5'UTR Inter-chr q25.3 p13.11 Seq+ 96995 ChimerSeq TCGA FAWG TCGA_RNA-Seq HELZ-RBFOX3 HELZ chr17 67215899 - RBFOX3 chr17 79482598 - Exonic hg38 OV TCGA-24-1424-01A 38 8 CDS-5'UTR Intra-chr q24.2 q25.3 Seq+ 96996 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPATCH8-MYO1D GPATCH8 chr17 44503326 - MYO1D chr17 32494915 - Exonic hg38 OV TCGA-24-1424-01A 35 18 Out-of-frame Intra-chr q21.31 q11.2 Seq+ 96997 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGRN-NDUFS5 AGRN chr1 1035324 + NDUFS5 chr1 39028723 + Exonic hg38 OV TCGA-24-1424-01A 35 16 CDS-5'UTR Intra-chr p36.33 p34.3 Seq+ 96998 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBOAT2-YWHAE MBOAT2 chr2 9003540 - YWHAE chr17 1345499 - Exonic hg38 OV TCGA-24-1424-01A 28 26 5'UTR-5'UTR Inter-chr p25.1 p13.3 Seq+ 96999 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF675-DNAH17 ZNF675 chr19 23687031 - DNAH17 chr17 78507805 - Exonic hg38 OV TCGA-24-1424-01A 26 11 In-Frame Inter-chr p12 Transcription factor q25.3 Seq+ 97000 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP18-BAG6 USP18 chr22 18157820 + BAG6 chr6 31639226 - Exonic hg38 OV TCGA-24-1424-01A 22 15 CDS-5'UTR Inter-chr q11.21 p21.33 Seq+ 97001 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF234-CEACAM20 ZNF234 chr19 44150505 + CEACAM20 chr19 44525244 - Exonic hg38 OV TCGA-24-1424-01A 19 8 In-Frame Intra-chr q13.31 Transcription factor q13.31 Seq+ 97002 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZCCHC17-NDP ZCCHC17 chr1 31348974 + NDP chrX 43958852 - Exonic hg38 OV TCGA-24-1424-01A 15 2 CDS-5'UTR Inter-chr p35.2 p11.3 Seq+ 97003 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMIZ1-C10orf107 ZMIZ1 chr10 79162133 + C10orf107 chr10 61686041 + Exonic hg38 OV TCGA-24-1424-01A 13 8 Out-of-frame Intra-chr q22.3 q21.2 Seq+ 97004 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLF13-DTX2 KLF13 chr15 31327789 + DTX2 chr7 76480421 + Exonic hg38 OV TCGA-24-1425-01A 13 5 3'UTR-3'UTR Inter-chr Transcription factor Seq+ 97005 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSP90AA1-SENP8 HSP90AA1 chr14 102083546 - SENP8 chr15 72143649 + Exonic hg38 OV TCGA-24-1425-01A 13 2 CDS-3'UTR Inter-chr q32.31 Oncogene q23 97006 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST6GALNAC1-ZMAT5 ST6GALNAC1 chr17 76643508 - ZMAT5 chr22 29742480 - Exonic hg38 OV TCGA-24-1425-01A 7 8 Out-of-frame Inter-chr q25.1 q12.2 Seq+ 97007 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARD3-ZNF521 PARD3 chr10 34516979 - ZNF521 chr18 25092081 - Exonic hg38 OV TCGA-24-1426-01A 103 19 In-Frame Inter-chr p11.21 q11.2 Oncogene Transcription factor Seq+ 97008 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNPO3-DYM TNPO3 chr7 129054651 - DYM chr18 49163787 - Exonic hg38 OV TCGA-24-1426-01A 52 11 Out-of-frame Inter-chr q32.1 q21.1 Seq+ 97009 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL1A-SSBP1 OSBPL1A chr18 24196125 - SSBP1 chr7 141750311 + Exonic hg38 OV TCGA-24-1426-01A 12 8 CDS-3'UTR Inter-chr q11.2 Seq+ 97010 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADK-FAM149B1 ADK chr10 74176886 + FAM149B1 chr10 73228060 + Exonic hg38 OV TCGA-24-1426-01A 9 9 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 97011 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGS1-SYNGR2 PGS1 chr17 78378808 + SYNGR2 chr17 78171739 + Exonic hg38 OV TCGA-24-1427-01A 12 9 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 97012 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEO1-THSD4 NEO1 chr15 73178427 + THSD4 chr15 71411687 + Exonic hg38 OV TCGA-24-1428-01A 161 31 In-Frame Intra-chr q24.1 q23 Seq+ 97013 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACAP2-DOCK8 ACAP2 chr3 195392090 - DOCK8 chr9 340159 + Exonic hg38 OV TCGA-24-1428-01A 37 6 Out-of-frame Inter-chr q29 p24.3 Seq+ 97014 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC19-TMEM45A TTC19 chr17 16026702 + TMEM45A chr3 100568822 + Exonic hg38 OV TCGA-24-1428-01A 34 10 Out-of-frame Inter-chr p12 q12.2 Seq+ 97015 ChimerSeq TCGA FAWG TCGA_RNA-Seq TET3-C2orf78 TET3 chr2 74003166 + C2orf78 chr2 73813477 + Exonic hg38 OV TCGA-24-1428-01A 22 2 Out-of-frame Intra-chr p13.1 Transcription factor p13.1 Seq+ 97016 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM171A1-DCLRE1CP1 FAM171A1 chr10 15370956 - DCLRE1CP1 chr10 15021863 - Exonic hg38 OV TCGA-24-1430-01A 37 15 CDS-3'UTR Intra-chr p13 p13 Seq+ 97017 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF292-SLIRP ZNF292 chr6 87155759 + SLIRP chr14 77710838 + Exonic hg38 OV TCGA-24-1430-01A 30 7 Out-of-frame Inter-chr q14.3 Tumor suppressor gene Transcription factor q24.3 Seq+ 97018 ChimerSeq TCGA FAWG TCGA_RNA-Seq WFDC2-PIGT WFDC2 chr20 45470532 + PIGT chr20 45447635 + Exonic hg38 OV TCGA-24-1430-01A 17 6 CDS-3'UTR Intra-chr q13.12 q13.12 97019 ChimerSeq TCGA FAWG TCGA_RNA-Seq OXR1-CLEC18C OXR1 chr8 106519139 + CLEC18C chr16 70181850 + Exonic hg38 OV TCGA-24-1430-01A 7 3 Out-of-frame Inter-chr q23.1 q22.1 Seq+ 97020 ChimerSeq TCGA FAWG TCGA_RNA-Seq AJUBA-SLC7A8 AJUBA chr14 22974047 - SLC7A8 chr14 23183038 - Exonic hg38 OV TCGA-24-1430-01A 6 4 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 97021 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUL7-USP10 CUL7 chr6 43045986 - USP10 chr16 84775160 + Exonic hg38 OV TCGA-24-1430-01A 1 9 Out-of-frame Inter-chr p21.1 q24.1 Seq+ 97022 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM222B-NEK8 FAM222B chr17 28766586 - NEK8 chr17 28733983 + Exonic hg38 OV TCGA-24-1431-01A 486 280 Out-of-frame Intra-chr q11.2 q11.2 Other:NEK Seq+ 97023 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP2A1-FCGRT AP2A1 chr19 49803453 + FCGRT chr19 49526010 + Exonic hg38 OV TCGA-24-1431-01A 257 148 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 97024 ChimerSeq TCGA FAWG TCGA_RNA-Seq SORL1-SC5D SORL1 chr11 121522989 + SC5D chr11 121307057 + Exonic hg38 OV TCGA-24-1431-01A 117 68 In-Frame Intra-chr q24.1 q23.3 Seq+ 97025 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP5H-LTBP3 ATP5H chr17 75039031 - LTBP3 chr11 65539505 - Exonic hg38 OV TCGA-24-1431-01A 62 101 Out-of-frame Inter-chr q25.1 q13.1 97026 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCYL1-FRMD8 SCYL1 chr11 65532805 + FRMD8 chr11 65404864 + Exonic hg38 OV TCGA-24-1431-01A 62 47 In-Frame Intra-chr q13.1 Other:SCY1 Tumor suppressor gene q13.1 Seq+ 97027 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA6-AS3 NCOA6 chr20 34825472 - AS3 chr17 48600447 + Exonic hg38 OV TCGA-24-1431-01A 23 24 Out-of-frame Inter-chr q11.22 Tumor suppressor gene 97028 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAX1BP3-PMP22 TAX1BP3 chr17 3664195 - PMP22 chr17 15231080 - Exonic hg38 OV TCGA-24-1431-01A 14 36 Out-of-frame Intra-chr p13.2 p12 Seq+ 97029 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP170B-ADSSL1 CEP170B chr14 104893849 + ADSSL1 chr14 104746236 + Exonic hg38 OV TCGA-24-1431-01A 13 9 Out-of-frame Intra-chr q32.33 q32.33 Seq+ 97030 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKAP1-RBM6 SKAP1 chr17 48345905 - RBM6 chr3 49999440 + Exonic hg38 OV TCGA-24-1431-01A 11 17 In-Frame Inter-chr q21.32 p21.31 Tumor suppressor gene Seq+ 97031 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIGIRR-DEAF1 SIGIRR chr11 407062 - DEAF1 chr11 644654 - Exonic hg38 OV TCGA-24-1431-01A 11 9 CDS-5'UTR Intra-chr p15.5 Transcription factor Seq+ 97032 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBA3-RBM6 UBA3 chr3 69061814 - RBM6 chr3 50054335 + Exonic hg38 OV TCGA-24-1431-01A 11 5 Out-of-frame Intra-chr p14.1 p21.31 Tumor suppressor gene Seq+ 97033 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBNO2-PIAS4 SBNO2 chr19 1174172 - PIAS4 chr19 4012923 + Exonic hg38 OV TCGA-24-1431-01A 5 13 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 97034 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D22A-POLDIP3 TBC1D22A chr22 46797620 + POLDIP3 chr22 42587572 - Exonic hg38 OV TCGA-24-1434-01A 34 11 In-Frame Intra-chr q13.31 q13.2 Seq+ 97035 ChimerSeq TCGA FAWG TCGA_RNA-Seq ILK-PLPPR1 ILK chr11 6608211 + PLPPR1 chr9 101312798 + Exonic hg38 OV TCGA-24-1434-01A 18 4 CDS-3'UTR Inter-chr p15.4 TKL:MLK Tumor suppressor gene q31.1 97036 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC3A2-DLGAP4 SLC3A2 chr11 62856381 + DLGAP4 chr20 36524250 + Exonic hg38 OV TCGA-24-1435-01A 32 28 In-Frame Inter-chr q12.3 q11.23 Seq+ 97037 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBP2-CHCHD3 OSBP2 chr22 30870682 + CHCHD3 chr7 132785660 - Exonic hg38 OV TCGA-24-1435-01A 24 6 In-Frame Inter-chr q12.2 q33 Transcription factor Seq+ 97038 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGAM5-CCL28 PGAM5 chr12 132711067 + CCL28 chr5 43388476 - Exonic hg38 OV TCGA-24-1435-01A 22 9 Out-of-frame Inter-chr q24.33 p12 Seq+ 97039 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF589-HMCES ZNF589 chr3 48241214 + HMCES chr3 129298354 + Exonic hg38 OV TCGA-24-1436-01A 14 22 Out-of-frame Intra-chr p21.31 Transcription factor q21.3 Seq+ 97040 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD2-SBNO2 BTBD2 chr19 2013547 - SBNO2 chr19 1127765 - Exonic hg38 OV TCGA-24-1436-01A 9 13 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 97041 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDHD1-LGALS3 WDHD1 chr14 55026711 - LGALS3 chr14 55140275 + Exonic hg38 OV TCGA-24-1464-01A 28 1 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 97042 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAP-SLC25A20 SCAP chr3 47475799 - SLC25A20 chr3 48892072 - Exonic hg38 OV TCGA-24-1467-01A 21 7 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 97043 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKAP1-ZNF74 SKAP1 chr17 48396680 - ZNF74 chr22 20400632 + Exonic hg38 OV TCGA-24-1467-01A 19 6 Out-of-frame Inter-chr q21.32 q11.21 Transcription factor Seq+ 97044 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC57-RAB40B CCDC57 chr17 82188219 - RAB40B chr17 82664556 - Exonic hg38 OV TCGA-24-1467-01A 11 3 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 97045 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC9-SAE1 CCDC9 chr19 47256609 + SAE1 chr19 47169818 + Exonic hg38 OV TCGA-24-1467-01A 11 3 5'UTR-5'UTR Intra-chr q13.32 q13.32 Seq+ 97046 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF2-DEPTOR TAF2 chr8 119819346 - DEPTOR chr8 119928400 + Exonic hg38 OV TCGA-24-1467-01A 6 8 In-Frame Intra-chr q24.12 q24.12 Seq+ 97047 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4-CCDC85B MAP4 chr3 47998638 - CCDC85B chr11 65890857 + Exonic hg38 OV TCGA-24-1467-01A 4 4 Out-of-frame Inter-chr p21.31 q13.1 Seq+ 97048 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3PXD2A-RB1 SH3PXD2A chr10 103611581 - RB1 chr13 48464998 + Exonic hg38 OV TCGA-24-1469-01A 92 54 In-Frame Inter-chr q24.33 q14.2 Oncogene Tumor suppressor gene Seq+ 97049 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCL1-CTSS MCL1 chr1 150578843 - CTSS chr1 150747879 - Exonic hg38 OV TCGA-24-1469-01A 34 23 In-Frame Intra-chr q21.2 Oncogene q21.3 Seq+ 97050 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTN4-SUMO2P17 ACTN4 chr19 38647907 + SUMO2P17 chr17 48879345 - Exonic hg38 OV TCGA-24-1469-01A 33 11 Out-of-frame Inter-chr q21.32 97051 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS4-LGALS3BP INTS4 chr11 77994590 - LGALS3BP chr17 78972704 - Exonic hg38 OV TCGA-24-1469-01A 26 33 Out-of-frame Inter-chr q14.1 q25.3 Seq+ 97052 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOB3B-CAAP1 MOB3B chr9 27529555 - CAAP1 chr9 26861139 - Exonic hg38 OV TCGA-24-1469-01A 23 4 5'UTR-CDS Intra-chr p21.2 p21.2 Seq+ 97053 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2I-POM121 GTF2I chr7 74700634 + POM121 chr7 72948918 + Exonic hg38 OV TCGA-24-1469-01A 16 1 CDS-3'UTR Intra-chr q11.23 Transcription factor q11.23 Seq+ 97054 ChimerSeq TCGA FAWG TCGA_RNA-Seq MECOM-LRRC31 MECOM chr3 169663336 - LRRC31 chr3 169869872 - Exonic hg38 OV TCGA-24-1469-01A 15 3 5'UTR-5'UTR Intra-chr q26.2 Transcription factor q26.2 Seq+ 97055 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAG1-MAP4 DAG1 chr3 49533680 + MAP4 chr3 47877523 - Exonic hg38 OV TCGA-24-1469-01A 10 10 3'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 97056 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRB2-PTP4A2 ADGRB2 chr1 31755999 - PTP4A2 chr1 31919658 - Exonic hg38 OV TCGA-24-1469-01A 9 6 CDS-5'UTR Intra-chr p35.2 p35.2 97057 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMP1-FAM160B2 BMP1 chr8 22180483 + FAM160B2 chr8 22094440 + Exonic hg38 OV TCGA-24-1469-01A 10 1 In-Frame Intra-chr p21.3 p21.3 Seq+ 97058 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSDL1-CORO1A HSDL1 chr16 84145080 - CORO1A chr16 30185209 + Exonic hg38 OV TCGA-24-1469-01A 5 6 5'UTR-5'UTR Intra-chr q24.1 p11.2 Seq+ 97059 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC44A4-TNXB SLC44A4 chr6 31869155 - TNXB chr6 32042362 - Exonic hg38 OV TCGA-24-1470-01A 250 181 5'UTR-5'UTR Intra-chr Seq+ 97060 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFR-SND1 ZFR chr5 32444229 - SND1 chr7 127887902 + Exonic hg38 OV TCGA-24-1470-01A 105 22 In-Frame Inter-chr p13.3 q32.1 Seq+ 97061 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHBP1L1-POLA2 EHBP1L1 chr11 65576406 + POLA2 chr11 65294153 + Exonic hg38 OV TCGA-24-1470-01A 76 40 In-Frame Intra-chr q13.1 q13.1 Seq+ 97062 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT5A-RILPL2 KMT5A chr12 123396432 + RILPL2 chr12 123430659 - Exonic hg38 OV TCGA-24-1470-01A 56 25 In-Frame Intra-chr q24.31 q24.31 97063 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRRM2-KCTD5 SRRM2 chr16 2760499 + KCTD5 chr16 2695935 + Exonic hg38 OV TCGA-24-1470-01A 19 10 In-Frame Intra-chr p13.3 p13.3 Seq+ 97064 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC5A1-DEPDC5 SLC5A1 chr22 32091762 + DEPDC5 chr22 31870590 + Exonic hg38 OV TCGA-24-1470-01A 18 3 Out-of-frame Intra-chr q12.3 q12.2 Seq+ 97065 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNIP1-ACSL6 FNIP1 chr5 131698917 - ACSL6 chr5 131994251 - Exonic hg38 OV TCGA-24-1470-01A 16 6 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 97066 ChimerSeq TCGA FAWG TCGA_RNA-Seq RB1-TRIM13 RB1 chr13 48364971 + TRIM13 chr13 50018370 + Exonic hg38 OV TCGA-24-1470-01A 13 9 CDS-3'UTR Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Tumor suppressor gene Seq+ 97067 ChimerSeq TCGA FAWG TCGA_RNA-Seq RB1-KCNRG RB1 chr13 48364971 + KCNRG chr13 50018823 + Exonic hg38 OV TCGA-24-1470-01A 11 10 Out-of-frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.2 Tumor suppressor gene Seq+ 97068 ChimerSeq TCGA FAWG TCGA_RNA-Seq STRIP1-CSF1 STRIP1 chr1 110043270 + CSF1 chr1 109929581 + Exonic hg38 OV TCGA-24-1470-01A 3 9 CDS-3'UTR Intra-chr p13.3 p13.3 Seq+ 97069 ChimerSeq TCGA FAWG TCGA_RNA-Seq YWHAG-GPR37L1 YWHAG chr7 76358722 - GPR37L1 chr1 202127741 + Exonic hg38 OV TCGA-24-1471-01A 182 22 In-Frame Inter-chr q11.23 q32.1 Seq+ 97070 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF28-SEZ6 ARHGEF28 chr5 73684884 + SEZ6 chr17 28969952 - Exonic hg38 OV TCGA-24-1471-01A 49 0 In-Frame Inter-chr q13.2 q11.2 Seq+ 97071 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4-HADHA MAP4 chr3 48088773 - HADHA chr2 26239143 - Exonic hg38 OV TCGA-24-1471-01A 48 2 5'UTR-CDS Inter-chr p21.31 p23.3 Seq+ 97072 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH2-MNDA NOTCH2 chr1 119935472 - MNDA chr1 158845587 + Exonic hg38 OV TCGA-24-1474-01A 432 201 Out-of-frame Intra-chr p12 Oncogene Tumor suppressor gene q23.1 Seq+ 97073 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP5I-NSD2 ATP5I chr4 673912 - NSD2 chr4 1935144 + Exonic hg38 OV TCGA-24-1474-01A 151 234 Out-of-frame Intra-chr p16.3 p16.3 97074 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAA25-ATXN2 NAA25 chr12 112060270 - ATXN2 chr12 111453845 - Exonic hg38 OV TCGA-24-1474-01A 64 40 Out-of-frame Intra-chr q24.13 q24.12 Seq+ 97075 ChimerSeq TCGA FAWG TCGA_RNA-Seq HCP5-LY6G6C HCP5 chr6 31400763 + LY6G6C chr6 31719310 - Exonic hg38 OV TCGA-24-1474-01A 55 5 3'UTR-5'UTR Intra-chr p21.33 Seq+ 97076 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICA-LY6G6C MICA chr6 31400763 + LY6G6C chr6 31719310 - Exonic hg38 OV TCGA-24-1474-01A 55 5 3'UTR-5'UTR Intra-chr p21.33 Seq+ 97077 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF93-CYP4F22 ZNF93 chr19 19901091 + CYP4F22 chr19 15523693 + Exonic hg38 OV TCGA-24-1474-01A 46 21 CDS-5'UTR Intra-chr p12 Transcription factor p13.12 Seq+ 97078 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53-SLC6A4 TP53 chr17 7687377 - SLC6A4 chr17 30222915 - Exonic hg38 OV TCGA-24-1474-01A 28 81 5'UTR-5'UTR Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor q11.2 Seq+ 97079 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS15L1-CIB3 EPS15L1 chr19 16471913 - CIB3 chr19 16169722 - Exonic hg38 OV TCGA-24-1474-01A 37 3 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 97080 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE4B-OR4G4P UBE4B chr1 10072214 + OR4G4P chr1 53282 + Exonic hg38 OV TCGA-24-1474-01A 16 4 Out-of-frame Intra-chr p36.22 Tumor suppressor gene 97081 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-MLLT10 FGFR3 chr4 1805904 + MLLT10 chr10 21740030 + Exonic hg38 OV TCGA-24-1474-01A 15 6 In-Frame Inter-chr p16.3 TK:FGFR Oncogene p12.31 Oncogene Seq+ 97082 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST3GAL1-GPR39 ST3GAL1 chr8 133571693 - GPR39 chr2 132645101 + Exonic hg38 OV TCGA-24-1474-01A 14 9 5'UTR-CDS Inter-chr q24.22 q21.2 Seq+ 97083 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1orf21-PCAT1 C1orf21 chr1 184387368 + PCAT1 chr8 126877672 + Exonic hg38 OV TCGA-24-1474-01A 12 6 5'UTR-5'UTR Inter-chr q25.3 q24.21 Seq+ 97084 ChimerSeq TCGA FAWG TCGA_RNA-Seq APBB2-ZFYVE28 APBB2 chr4 41214405 - ZFYVE28 chr4 2354073 - Exonic hg38 OV TCGA-24-1474-01A 9 9 5'UTR-5'UTR Intra-chr p13 p16.3 Seq+ 97085 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF587B-LHFPL4 ZNF587B chr19 57839149 + LHFPL4 chr3 9506203 - Exonic hg38 OV TCGA-24-1474-01A 8 3 In-Frame Inter-chr q13.43 Transcription factor p25.3 Seq+ 97086 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC7A2-DHTKD1 SLC7A2 chr8 17502302 + DHTKD1 chr10 12112900 + Exonic hg38 OV TCGA-24-1474-01A 8 2 5'UTR-CDS Inter-chr p22 p14 Seq+ 97087 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK3-KIF26A MARK3 chr14 103457212 + KIF26A chr14 104166859 + Exonic hg38 OV TCGA-24-1474-01A 6 8 Out-of-frame Intra-chr q32.32 CAMK:CAMKL q32.33 Seq+ 97088 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF18-INSR ARHGEF18 chr19 7395247 + INSR chr19 7267896 - Exonic hg38 OV TCGA-24-1474-01A 1 1 5'UTR-CDS Intra-chr p13.2 p13.2 TK:InsR Seq+ 97089 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRSK1-COX6B1 BRSK1 chr19 55305586 + COX6B1 chr19 35658594 + Exonic hg38 OV TCGA-24-1544-01A 72 23 In-Frame Intra-chr q13.42 CAMK:CAMKL Tumor suppressor gene q13.12 Seq+ 97090 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHPN2-GRIN2D RHPN2 chr19 32990514 - GRIN2D chr19 48416002 + Exonic hg38 OV TCGA-24-1544-01A 54 13 In-Frame Intra-chr q13.11 q13.33 Seq+ 97091 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP1-PINX1 AGAP1 chr2 235494849 + PINX1 chr8 10826244 - Exonic hg38 OV TCGA-24-1544-01A 30 4 CDS-3'UTR Inter-chr q37.2 p23.1 Tumor suppressor gene Seq+ 97092 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR70-AS4 WDR70 chr5 37396570 + AS4 chr5 38286361 - Exonic hg38 OV TCGA-24-1544-01A 9 2 Out-of-frame Intra-chr p13.2 97093 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK4-ZNF837 PAK4 chr19 39125919 + ZNF837 chr19 58369928 - Exonic hg38 OV TCGA-24-1544-01A 6 3 5'UTR-5'UTR Intra-chr q13.2 STE:STE20 q13.43 Transcription factor Seq+ 97094 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41-TRNAU1AP EPB41 chr1 28914768 + TRNAU1AP chr1 28553640 + Exonic hg38 OV TCGA-24-1544-01A 6 0 5'UTR-5'UTR Intra-chr p35.3 Tumor suppressor gene p35.3 97095 ChimerSeq TCGA FAWG TCGA_RNA-Seq WASF2-SLC9A1 WASF2 chr1 27489986 - SLC9A1 chr1 27103312 - Exonic hg38 OV TCGA-24-1545-01A 135 62 5'UTR-CDS Intra-chr p36.11 p36.11 Seq+ 97096 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB11FIP3-CAPN15 RAB11FIP3 chr16 426720 + CAPN15 chr16 546817 + Exonic hg38 OV TCGA-24-1545-01A 24 13 3'UTR-5'UTR Intra-chr p13.3 Seq+ 97097 ChimerSeq TCGA FAWG TCGA_RNA-Seq MFSD6-C2orf88 MFSD6 chr2 190437561 + C2orf88 chr2 190199697 + Exonic hg38 OV TCGA-24-1545-01A 8 11 CDS-5'UTR Intra-chr q32.2 q32.2 Seq+ 97098 ChimerSeq TCGA FAWG TCGA_RNA-Seq EP300-PCBP3 EP300 chr22 41162779 + PCBP3 chr21 45910902 + Exonic hg38 OV TCGA-24-1546-01A 35 9 Out-of-frame Inter-chr q13.2 Oncogene q22.3 Seq+ 97099 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIPK2-DENND2A HIPK2 chr7 139777605 - DENND2A chr7 140587780 - Exonic hg38 OV TCGA-24-1546-01A 10 6 Out-of-frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 Seq+ 97100 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGK1-ATP7A PGK1 chrX 78109917 + ATP7A chrX 78038836 + Exonic hg38 OV TCGA-24-1548-01A 78 14 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 97101 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGK3-DNAJC5B SGK3 chr8 66798625 + DNAJC5B chr8 66080377 + Exonic hg38 OV TCGA-24-1548-01A 33 18 In-Frame Intra-chr q13.1 AGC:SGK q13.1 Seq+ 97102 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-RAB11FIP4 NF1 chr17 31095369 + RAB11FIP4 chr17 31431813 + Exonic hg38 OV TCGA-24-1549-01A 48 24 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 97103 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKAP1-SP2 SKAP1 chr17 48345905 - SP2 chr17 47915312 + Exonic hg38 OV TCGA-24-1549-01A 26 8 In-Frame Intra-chr q21.32 q21.32 Transcription factor Seq+ 97104 ChimerSeq TCGA FAWG TCGA_RNA-Seq METAP1D-HAT1 METAP1D chr2 172000009 + HAT1 chr2 171976157 + Exonic hg38 OV TCGA-24-1549-01A 25 0 In-Frame Intra-chr q31.1 q31.1 Seq+ 97105 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1958-SETD4 KIAA1958 chr9 112487118 + SETD4 chr21 36058924 - Exonic hg38 OV TCGA-24-1549-01A 19 8 5'UTR-5'UTR Inter-chr q32 q22.12 Seq+ 97106 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMTM7-METTL2B CMTM7 chr3 32392065 + METTL2B chr7 128479158 + Exonic hg38 OV TCGA-24-1549-01A 19 4 Out-of-frame Inter-chr p22.3 q32.1 Seq+ 97107 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIVEP2-PREP HIVEP2 chr6 142945944 - PREP chr6 105285580 - Exonic hg38 OV TCGA-24-1549-01A 13 14 5'UTR-CDS Intra-chr q24.2 Transcription factor q21 97108 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAGI3-DENND5A MAGI3 chr1 113391349 + DENND5A chr11 9139854 - Exonic hg38 OV TCGA-24-1549-01A 10 3 In-Frame Inter-chr p13.2 p15.4 Seq+ 97109 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFYC-CAP1 NFYC chr1 40691867 + CAP1 chr1 40059337 + Exonic hg38 OV TCGA-24-1550-01A 69 41 5'UTR-5'UTR Intra-chr p34.2 Transcription factor p34.2 Seq+ 97110 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLSTN1-SPA17 CLSTN1 chr1 9823643 - SPA17 chr11 124691696 + Exonic hg38 OV TCGA-24-1550-01A 53 28 Out-of-frame Inter-chr p36.22 q24.2 Seq+ 97111 ChimerSeq TCGA FAWG TCGA_RNA-Seq RCC1-CHEK2P5 RCC1 chr1 28508160 + CHEK2P5 chr10 38713197 + Exonic hg38 OV TCGA-24-1550-01A 15 0 Out-of-frame Inter-chr p35.3 p11.1 Seq+ 97112 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNHG3-CHEK2P5 SNHG3 chr1 28508160 + CHEK2P5 chr10 38713197 + Exonic hg38 OV TCGA-24-1550-01A 15 0 Out-of-frame Inter-chr p35.3 p11.1 Seq+ 97113 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP8A2-CRYL1 ATP8A2 chr13 25862408 + CRYL1 chr13 20413387 - Exonic hg38 OV TCGA-24-1550-01A 12 5 In-Frame Intra-chr q12.13 q12.11 Seq+ 97114 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF805-ETFB ZNF805 chr19 57240921 + ETFB chr19 51354308 - Exonic hg38 OV TCGA-24-1551-01A 148 32 In-Frame Intra-chr q13.43 Transcription factor q13.41 Seq+ 97115 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC5-SMTNL1 ZDHHC5 chr11 57668187 + SMTNL1 chr11 57545881 + Exonic hg38 OV TCGA-24-1551-01A 134 33 5'UTR-CDS Intra-chr q12.1 q12.1 Seq+ 97116 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC10-RRP1 TRAPPC10 chr21 44012560 + RRP1 chr21 43791350 + Exonic hg38 OV TCGA-24-1551-01A 66 4 In-Frame Intra-chr q22.3 q22.3 Seq+ 97117 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTCFL-POLR3H CTCFL chr20 57524203 - POLR3H chr22 41528826 - Exonic hg38 OV TCGA-24-1551-01A 28 4 Out-of-frame Inter-chr q13.31 Tumor suppressor gene Transcription factor q13.2 Seq+ 97118 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC2-SLC26A5 DNAJC2 chr7 103341764 - SLC26A5 chr7 103352926 - Exonic hg38 OV TCGA-24-1551-01A 25 10 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 97119 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTK2-TSTA3 PTK2 chr8 140674298 - TSTA3 chr8 143616723 - Exonic hg38 OV TCGA-24-1551-01A 10 6 CDS-5'UTR Intra-chr q24.3 Seq+ 97120 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGPL1-ADAMTS14 SGPL1 chr10 70816880 + ADAMTS14 chr10 70732254 + Exonic hg38 OV TCGA-24-1551-01A 8 2 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 97121 ChimerSeq TCGA FAWG TCGA_RNA-Seq SET-GLE1 SET chr9 128684007 + GLE1 chr9 128522668 + Exonic hg38 OV TCGA-24-1551-01A 8 1 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 97122 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEDD4L-TBC1D17 NEDD4L chr18 58252054 + TBC1D17 chr19 49878498 + Exonic hg38 OV TCGA-24-1551-01A 7 2 In-Frame Inter-chr q21.31 Tumor suppressor gene q13.33 Seq+ 97123 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAB1-MFSD6 NAB1 chr2 190673152 + MFSD6 chr2 190488657 + Exonic hg38 OV TCGA-24-1551-01A 6 3 Out-of-frame Intra-chr q32.2 q32.2 Seq+ 97124 ChimerSeq TCGA FAWG TCGA_RNA-Seq C7orf49-C7orf73 C7orf49 chr7 135167732 - C7orf73 chr7 135688904 + Exonic hg38 OV TCGA-24-1551-01A 6 2 Out-of-frame Intra-chr q33 q33 97125 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUDT19-SLC7A9 NUDT19 chr19 32692674 + SLC7A9 chr19 32833323 - Exonic hg38 OV TCGA-24-1552-01A 56 26 In-Frame Intra-chr q13.11 q13.11 Seq+ 97126 ChimerSeq TCGA FAWG TCGA_RNA-Seq NNT-NIM1K NNT chr5 43628387 + NIM1K chr5 43277057 + Exonic hg38 OV TCGA-24-1552-01A 21 13 In-Frame Intra-chr p12 p12 97127 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO36-ALCAM FBXO36 chr2 229922606 + ALCAM chr3 105571849 + Exonic hg38 OV TCGA-24-1552-01A 11 5 Out-of-frame Inter-chr q36.3 q13.11 Seq+ 97128 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMSAP1-KCNT1 CAMSAP1 chr9 135866456 - KCNT1 chr9 135765031 + Exonic hg38 OV TCGA-24-1553-01A 31 11 In-Frame Intra-chr q34.3 q34.3 Seq+ 97129 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAN2-MIP PAN2 chr12 56332813 - MIP chr12 56453755 - Exonic hg38 OV TCGA-24-1553-01A 15 5 In-Frame Intra-chr q13.3 q13.3 Seq+ 97130 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF12-DNM2 PHF12 chr17 28913879 - DNM2 chr19 10772479 + Exonic hg38 OV TCGA-24-1553-01A 15 4 Out-of-frame Inter-chr q11.2 p13.2 Seq+ 97131 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXK1-RNPEP FOXK1 chr7 4682868 + RNPEP chr1 201988904 + Exonic hg38 OV TCGA-24-1553-01A 14 4 Out-of-frame Inter-chr p22.1 Transcription factor q32.1 Seq+ 97132 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFAND3-DSCAM ZFAND3 chr6 37820016 + DSCAM chr21 40369245 - Exonic hg38 OV TCGA-24-1553-01A 14 1 Out-of-frame Inter-chr p21.2 q22.2 Seq+ 97133 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH1L-C1orf87 ASH1L chr1 155380043 - C1orf87 chr1 60055438 - Exonic hg38 OV TCGA-24-1553-01A 10 7 Out-of-frame Intra-chr q22 Transcription factor p32.1 Seq+ 97134 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF149-MAP4K4 RNF149 chr2 101294014 - MAP4K4 chr2 101790720 + Exonic hg38 OV TCGA-24-1553-01A 11 1 In-Frame Intra-chr q11.2 q11.2 Seq+ 97135 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0907-SMG5 KIAA0907 chr1 155933633 - SMG5 chr1 156272398 - Exonic hg38 OV TCGA-24-1553-01A 7 7 Out-of-frame Intra-chr q22 q22 Seq+ 97136 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP3-OXTR SRGAP3 chr3 9248885 - OXTR chr3 8768591 - Exonic hg38 OV TCGA-24-1555-01A 44 19 CDS-5'UTR Intra-chr p25.3 Tumor suppressor gene p25.3 Seq+ 97137 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCD5-PLAC8 SCD5 chr4 82798306 - PLAC8 chr4 83105020 - Exonic hg38 OV TCGA-24-1555-01A 35 15 In-Frame Intra-chr q21.22 q21.22 Seq+ 97138 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESCO1-FAM65C ESCO1 chr18 21600623 - FAM65C chr20 50630856 - Exonic hg38 OV TCGA-24-1555-01A 14 14 Out-of-frame Inter-chr q11.2 Seq+ 97139 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM135-MIPEP TMEM135 chr11 87038186 + MIPEP chr13 23730445 - Exonic hg38 OV TCGA-24-1556-01A 101 15 Out-of-frame Inter-chr q14.2 q12.12 Seq+ 97140 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRC1-VPS33B PRC1 chr15 90980242 - VPS33B chr15 90999054 - Exonic hg38 OV TCGA-24-1556-01A 52 1 In-Frame Intra-chr q26.1 q26.1 Seq+ 97141 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKAR-ASNSD1 ANKAR chr2 189674830 + ASNSD1 chr2 189670441 + Exonic hg38 OV TCGA-24-1556-01A 36 5 5'UTR-CDS Intra-chr q32.2 q32.2 Seq+ 97142 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACF1-CMTM4 MACF1 chr1 39388658 + CMTM4 chr16 66636581 - Exonic hg38 OV TCGA-24-1556-01A 27 2 In-Frame Inter-chr p34.3 q22.1 Seq+ 97143 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP6V1H-ALKAL1 ATP6V1H chr8 53743577 - ALKAL1 chr8 52534600 - Exonic hg38 OV TCGA-24-1556-01A 13 3 CDS-3'UTR Intra-chr q11.23 q11.23 97144 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHTN1-YTHDF1 SHTN1 chr10 117005022 - YTHDF1 chr20 63196734 - Exonic hg38 OV TCGA-24-1556-01A 12 3 Out-of-frame Inter-chr q25.3 q13.33 97145 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGB4-SMIM6 ITGB4 chr17 75724782 + SMIM6 chr17 75646655 + Exonic hg38 OV TCGA-24-1557-01A 22 15 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 97146 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUBPL-DOCK2 NUBPL chr14 31673574 + DOCK2 chr5 170008497 + Exonic hg38 OV TCGA-24-1557-01A 13 16 In-Frame Inter-chr q12 q35.1 Seq+ 97147 ChimerSeq TCGA FAWG TCGA_RNA-Seq RLF-MFSD2A RLF chr1 40161636 + MFSD2A chr1 39957087 + Exonic hg38 OV TCGA-24-1557-01A 10 11 In-Frame Intra-chr p34.2 Transcription factor p34.2 Tumor suppressor gene Seq+ 97148 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSMD2-FYB CSMD2 chr1 33825697 - FYB chr5 39153604 - Exonic hg38 OV TCGA-24-1557-01A 8 13 Out-of-frame Inter-chr p35.1 p13.1 Seq+ 97149 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUDCD1-VWA8 NUDCD1 chr8 109271005 - VWA8 chr13 41615084 - Exonic hg38 OV TCGA-24-1557-01A 8 8 In-Frame Inter-chr q23.1 q14.11 Seq+ 97150 ChimerSeq TCGA FAWG TCGA_RNA-Seq INPP5D-PKNOX2 INPP5D chr2 233139929 + PKNOX2 chr11 125331819 + Exonic hg38 OV TCGA-24-1557-01A 7 4 3'UTR-5'UTR Inter-chr q24.2 Transcription factor 97151 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAP2-CAP1 SMAP2 chr1 40374223 + CAP1 chr1 40061735 + Exonic hg38 OV TCGA-24-1557-01A 7 4 Out-of-frame Intra-chr p34.2 p34.2 Seq+ 97152 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB20-CPNE4 ZBTB20 chr3 114900304 - CPNE4 chr3 131905444 - Exonic hg38 OV TCGA-24-1557-01A 5 12 5'UTR-5'UTR Intra-chr q13.31 Transcription factor q22.1 Seq+ 97153 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD7-RGS9 BTBD7 chr14 93332820 - RGS9 chr17 65153422 + Exonic hg38 OV TCGA-24-1557-01A 7 1 5'UTR-CDS Inter-chr q24.1 Seq+ 97154 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB10-SCIN GRB10 chr7 50669722 - SCIN chr7 12622801 + Exonic hg38 OV TCGA-24-1557-01A 6 4 In-Frame Intra-chr p12.1 p21.3 Seq+ 97155 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R3E-MYH6 PPP1R3E chr14 23296756 - MYH6 chr14 23404822 - Exonic hg38 OV TCGA-24-1557-01A 6 3 3'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 97156 ChimerSeq TCGA FAWG TCGA_RNA-Seq STUB1-RHOT2 STUB1 chr16 681603 + RHOT2 chr16 672084 + Exonic hg38 OV TCGA-24-1557-01A 2 10 In-Frame Intra-chr p13.3 Tumor suppressor gene p13.3 Seq+ 97157 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD12-PTPRM ANKRD12 chr18 9136965 + PTPRM chr18 8296368 + Exonic hg38 OV TCGA-24-1557-01A 1 6 5'UTR-CDS Intra-chr p11.22 p11.23 Seq+ 97158 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF791-ETHE1 ZNF791 chr19 12611082 + ETHE1 chr19 43511566 - Exonic hg38 OV TCGA-24-1558-01A 281 229 In-Frame Intra-chr p13.13 Transcription factor q13.31 Seq+ 97159 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF20-DAND5 ZNF20 chr19 12140180 - DAND5 chr19 12973389 + Exonic hg38 OV TCGA-24-1558-01A 191 118 In-Frame Intra-chr p13.2 Transcription factor p13.13 Seq+ 97160 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF7IP2-STYXL1 ATF7IP2 chr16 10386122 + STYXL1 chr7 76005404 - Exonic hg38 OV TCGA-24-1558-01A 155 17 5'UTR-CDS Inter-chr p13.2 q11.23 Seq+ 97161 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD11-KLHL32 ANKRD11 chr16 89490245 - KLHL32 chr6 97041492 + Exonic hg38 OV TCGA-24-1558-01A 88 50 5'UTR-5'UTR Inter-chr q24.3 q16.1 Seq+ 97162 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF607-ARMC5 ZNF607 chr19 37707914 - ARMC5 chr16 31461922 + Exonic hg38 OV TCGA-24-1558-01A 84 26 In-Frame Inter-chr q13.12 Transcription factor p11.2 Tumor suppressor gene Seq+ 97163 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R37-RHPN2 PPP1R37 chr19 45093527 + RHPN2 chr19 33044364 - Exonic hg38 OV TCGA-24-1558-01A 75 55 Out-of-frame Intra-chr q13.32 q13.11 Seq+ 97164 ChimerSeq TCGA FAWG TCGA_RNA-Seq URI1-L34079.2 URI1 chr19 29942664 + L34079.2 chr19 43561020 - Exonic hg38 OV TCGA-24-1558-01A 77 46 Out-of-frame Intra-chr q12 q13.31 97165 ChimerSeq TCGA FAWG TCGA_RNA-Seq URI1-XRCC1 URI1 chr19 29942664 + XRCC1 chr19 43561020 - Exonic hg38 OV TCGA-24-1558-01A 77 46 In-Frame Intra-chr q12 q13.31 Seq+ 97166 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R37-PAFAH1B3 PPP1R37 chr19 45093527 + PAFAH1B3 chr19 42302325 - Exonic hg38 OV TCGA-24-1558-01A 55 23 CDS-5'UTR Intra-chr q13.32 q13.2 Seq+ 97167 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZSWIM4-HSH2D ZSWIM4 chr19 13831029 + HSH2D chr19 16143632 + Exonic hg38 OV TCGA-24-1558-01A 42 70 CDS-5'UTR Intra-chr p13.13 p13.11 Seq+ 97168 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLAUR-BABAM1 PLAUR chr19 43670066 - BABAM1 chr19 17267402 + Exonic hg38 OV TCGA-24-1558-01A 36 65 CDS-5'UTR Intra-chr q13.31 p13.11 Seq+ 97169 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTPAP-ALKBH3 MTPAP chr10 30322391 - ALKBH3 chr11 43919038 + Exonic hg38 OV TCGA-24-1558-01A 36 22 Out-of-frame Inter-chr p11.23 p11.2 Seq+ 97170 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDH9A1-TMCO1 ALDH9A1 chr1 165698250 - TMCO1 chr1 165728121 - Exonic hg38 OV TCGA-24-1558-01A 34 11 5'UTR-CDS Intra-chr q24.1 q24.1 Seq+ 97171 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLD3-CD79A PLD3 chr19 40367879 + CD79A chr19 41878990 + Exonic hg38 OV TCGA-24-1558-01A 25 29 Out-of-frame Intra-chr q13.2 q13.2 Oncogene Seq+ 97172 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF20-NFIX ZNF20 chr19 12140180 - NFIX chr19 13025021 + Exonic hg38 OV TCGA-24-1558-01A 21 17 In-Frame Intra-chr p13.2 Transcription factor p13.13 Transcription factor Seq+ 97173 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZSWIM4-ZNF540 ZSWIM4 chr19 13805148 + ZNF540 chr19 37598376 + Exonic hg38 OV TCGA-24-1558-01A 16 23 CDS-5'UTR Intra-chr p13.13 q13.12 Transcription factor Seq+ 97174 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIP1-STYXL1 HIP1 chr7 75738801 - STYXL1 chr7 76005404 - Exonic hg38 OV TCGA-24-1558-01A 16 14 In-Frame Intra-chr q11.23 q11.23 Seq+ 97175 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF709-CD177 ZNF709 chr19 12513744 - CD177 chr19 43354207 + Exonic hg38 OV TCGA-24-1558-01A 7 27 5'UTR-CDS Intra-chr p13.2 Transcription factor q13.31 Seq+ 97176 ChimerSeq TCGA FAWG TCGA_RNA-Seq HAUS8-ZNF846 HAUS8 chr19 17055861 - ZNF846 chr19 9762168 - Exonic hg38 OV TCGA-24-1558-01A 4 12 In-Frame Intra-chr p13.11 p13.2 Transcription factor Seq+ 97177 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSRP1-MED19 SSRP1 chr11 57334463 - MED19 chr11 57705229 - Exonic hg38 OV TCGA-24-1560-01A 41 6 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 97178 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLYR1-SRL GLYR1 chr16 4845074 - SRL chr16 4195786 - Exonic hg38 OV TCGA-24-1560-01A 11 5 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 97179 ChimerSeq TCGA FAWG TCGA_RNA-Seq SORL1-TBCEL SORL1 chr11 121627767 + TBCEL chr11 121086778 + Exonic hg38 OV TCGA-24-1560-01A 7 6 Out-of-frame Intra-chr q24.1 q23.3 Seq+ 97180 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFAP1-KCNIP4 AFAP1 chr4 7786194 - KCNIP4 chr4 20730129 - Exonic hg38 OV TCGA-24-1562-01A 57 20 In-Frame Intra-chr p16.1 p15.2 Seq+ 97181 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREBBP-SRL CREBBP chr16 3744894 - SRL chr16 4204634 - Exonic hg38 OV TCGA-24-1562-01A 34 1 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 97182 ChimerSeq TCGA FAWG TCGA_RNA-Seq STT3A-MIR4300HG STT3A chr11 125597119 + MIR4300HG chr11 82356628 - Exonic hg38 OV TCGA-24-1562-01A 12 1 CDS-3'UTR Intra-chr q24.2 q14.1 97183 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACAP2-ATP5J2 ACAP2 chr3 195285796 - ATP5J2 chr7 99460193 - Exonic hg38 OV TCGA-24-1563-01A 16 16 Out-of-frame Inter-chr q29 q22.1 97184 ChimerSeq TCGA FAWG TCGA_RNA-Seq THSD4-NR2E3 THSD4 chr15 71547481 + NR2E3 chr15 71807018 + Exonic hg38 OV TCGA-24-1563-01A 6 13 CDS-5'UTR Intra-chr q23 q23 Transcription factor Seq+ 97185 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0753-PER1 KIAA0753 chr17 6635011 - PER1 chr17 8150845 - Exonic hg38 OV TCGA-24-1564-01A 29 21 5'UTR-5'UTR Intra-chr p13.1 p13.1 Oncogene Seq+ 97186 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSMCE2-PBX3 NSMCE2 chr8 125182256 + PBX3 chr9 125915686 + Exonic hg38 OV TCGA-24-1567-01A 11 3 In-Frame Inter-chr q24.13 q33.3 Transcription factor Seq+ 97187 ChimerSeq TCGA FAWG TCGA_RNA-Seq LACE1-SNX3 LACE1 chr6 108295218 + SNX3 chr6 108223045 - Exonic hg38 OV TCGA-24-1603-01A 16 5 Out-of-frame Intra-chr q21 Seq+ 97188 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNA1D-DNAH1 CACNA1D chr3 53501720 + DNAH1 chr3 52357614 + Exonic hg38 OV TCGA-24-1603-01A 15 5 In-Frame Intra-chr p21.1 p21.1 Seq+ 97189 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAH1-PRKCD DNAH1 chr3 52357735 + PRKCD chr3 53187340 + Exonic hg38 OV TCGA-24-1603-01A 13 8 In-Frame Intra-chr p21.1 p21.1 Tumor suppressor gene Seq+ 97190 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC2B-ZNF550 TRAPPC2B chr19 57363943 + ZNF550 chr19 57535270 - Exonic hg38 OV TCGA-24-1603-01A 9 4 Out-of-frame Intra-chr q13.43 Transcription factor 97191 ChimerSeq TCGA FAWG TCGA_RNA-Seq DERL1-C6orf132 DERL1 chr8 123041970 - C6orf132 chr6 42110291 - Exonic hg38 OV TCGA-24-1604-01A 48 33 In-Frame Inter-chr q24.13 p21.1 Seq+ 97192 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD7-NSD3 CHD7 chr8 60679082 + NSD3 chr8 38305445 - Exonic hg38 OV TCGA-24-1604-01A 34 22 5'UTR-CDS Intra-chr q12.2 p11.23 Tumor suppressor gene 97193 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD3-DUSP26 NSD3 chr8 38304587 - DUSP26 chr8 33599765 - Exonic hg38 OV TCGA-24-1604-01A 22 15 CDS-5'UTR Intra-chr p11.23 Tumor suppressor gene p12 Tumor suppressor gene 97194 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANK1-FUT10 ANK1 chr8 41696363 - FUT10 chr8 33389798 - Exonic hg38 OV TCGA-24-1604-01A 15 13 Out-of-frame Intra-chr p11.21 p12 Seq+ 97195 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUL3-PCMTD1 CUL3 chr2 224584944 - PCMTD1 chr8 51845763 - Exonic hg38 OV TCGA-24-1604-01A 12 2 Out-of-frame Inter-chr q36.2 q11.23 Seq+ 97196 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD7-ANK1 CHD7 chr8 60809384 + ANK1 chr8 41725946 - Exonic hg38 OV TCGA-24-1604-01A 5 10 Out-of-frame Intra-chr q12.2 p11.21 Seq+ 97197 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADIPOR2-NINJ2 ADIPOR2 chr12 1691213 + NINJ2 chr12 566178 - Exonic hg38 OV TCGA-24-1616-01A 192 87 3'UTR-3'UTR Intra-chr p13.33 p13.33 Seq+ 97198 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKN1-ADGRE3 PKN1 chr19 14433542 + ADGRE3 chr19 14638340 - Exonic hg38 OV TCGA-24-1616-01A 134 53 In-Frame Intra-chr p13.12 AGC:PKN p13.12 97199 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHROOM3-MTHFD2L SHROOM3 chr4 76586469 + MTHFD2L chr4 74199794 + Exonic hg38 OV TCGA-24-1616-01A 33 19 CDS-5'UTR Intra-chr q21.1 q13.3 Seq+ 97200 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF195-FAM160A2 ZNF195 chr11 3379038 - FAM160A2 chr11 6219050 - Exonic hg38 OV TCGA-24-1842-01A 113 32 In-Frame Intra-chr p15.4 Transcription factor p15.4 Seq+ 97201 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK3-BCAS3 MARK3 chr14 103386080 + BCAS3 chr17 61368327 + Exonic hg38 OV TCGA-24-1842-01A 77 12 Out-of-frame Inter-chr q32.32 CAMK:CAMKL q23.2 Seq+ 97202 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLE2-RPS29 POLE2 chr14 49688136 - RPS29 chr14 49586049 - Exonic hg38 OV TCGA-24-1842-01A 75 11 In-Frame Intra-chr q21.3 q21.3 Seq+ 97203 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSBP3-DHCR24 SSBP3 chr1 54401861 - DHCR24 chr1 54876047 - Exonic hg38 OV TCGA-24-1842-01A 66 19 In-Frame Intra-chr p32.3 p32.3 Seq+ 97204 ChimerSeq TCGA FAWG TCGA_RNA-Seq MECOM-LRRC31 MECOM chr3 169663336 - LRRC31 chr3 169869872 - Exonic hg38 OV TCGA-24-1842-01A 55 3 5'UTR-5'UTR Intra-chr q26.2 Transcription factor q26.2 Seq+ 97205 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRK-SMG6 CRK chr17 1455877 - SMG6 chr17 2061622 - Exonic hg38 OV TCGA-24-1842-01A 36 5 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 97206 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXT2-TTC17 EXT2 chr11 44130138 + TTC17 chr11 43414590 + Exonic hg38 OV TCGA-24-1842-01A 33 9 In-Frame Intra-chr p11.2 Oncogene Tumor suppressor gene p12 Seq+ 97207 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYBBP1A-CAMTA2 MYBBP1A chr17 4548524 - CAMTA2 chr17 4983043 - Exonic hg38 OV TCGA-24-1842-01A 21 5 Out-of-frame Intra-chr p13.2 Tumor suppressor gene p13.2 Transcription factor Seq+ 97208 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMC2-RABGAP1L LAMC2 chr1 183236604 + RABGAP1L chr1 174637375 + Exonic hg38 OV TCGA-24-1842-01A 19 3 In-Frame Intra-chr q25.3 q25.1 Seq+ 97209 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEX6-MBD3L1 PEX6 chr6 42965681 - MBD3L1 chr19 8840912 + Exonic hg38 OV TCGA-24-1842-01A 14 3 CDS-5'UTR Inter-chr p21.1 p13.2 Seq+ 97210 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPZA1-CTTNBP2NL CAPZA1 chr1 112659779 + CTTNBP2NL chr1 112448942 + Exonic hg38 OV TCGA-24-1842-01A 12 0 In-Frame Intra-chr p13.2 p13.2 Seq+ 97211 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEPD-ZNF829 PEPD chr19 33512593 - ZNF829 chr19 36892471 - Exonic hg38 OV TCGA-24-1842-01A 10 6 Out-of-frame Intra-chr q13.11 q13.12 Transcription factor Seq+ 97212 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWOX-NUDT7 WWOX chr16 78115154 + NUDT7 chr16 77741582 + Exonic hg38 OV TCGA-24-1842-01A 11 2 In-Frame Intra-chr q23.1 Tumor suppressor gene q23.1 Seq+ 97213 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKL2-RBFOX1 MKL2 chr16 14140760 + RBFOX1 chr16 7518147 + Exonic hg38 OV TCGA-24-1842-01A 8 3 Out-of-frame Intra-chr p13.12 p13.3 Seq+ 97214 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-RCC1 CCDC6 chr10 59906122 - RCC1 chr1 28529858 + Exonic hg38 OV TCGA-24-1843-01A 64 3 CDS-5'UTR Inter-chr q21.2 p35.3 Seq+ 97215 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGB5-PDLIM5 ITGB5 chr3 124859242 - PDLIM5 chr4 94586408 + Exonic hg38 OV TCGA-24-1843-01A 24 4 In-Frame Inter-chr q21.2 q22.3 97216 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTN4-CIB3 ACTN4 chr19 38647907 + CIB3 chr19 16164913 - Exonic hg38 OV TCGA-24-1843-01A 16 7 3'UTR-CDS Intra-chr p13.11 97217 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL22-UBE2L3 KLHL22 chr22 20488985 - UBE2L3 chr22 21592861 + Exonic hg38 OV TCGA-24-1845-01A 34 1 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 97218 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED1-CLPB MED1 chr17 39451038 - CLPB chr11 72329804 - Exonic hg38 OV TCGA-24-1845-01A 31 2 In-Frame Inter-chr q12 Tumor suppressor gene q13.4 Seq+ 97219 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLASRP-TOMM40 CLASRP chr19 45068480 + TOMM40 chr19 44903030 + Exonic hg38 OV TCGA-24-1845-01A 22 0 In-Frame Intra-chr q13.32 q13.32 Seq+ 97220 ChimerSeq TCGA FAWG TCGA_RNA-Seq CFDP1-CHST6 CFDP1 chr16 75411825 - CHST6 chr16 75473467 - Exonic hg38 OV TCGA-24-1845-01A 16 1 CDS-3'UTR Intra-chr q23.1 q23.1 97221 ChimerSeq TCGA FAWG TCGA_RNA-Seq EDC3-SCAMP2 EDC3 chr15 74695880 - SCAMP2 chr15 74848701 - Exonic hg38 OV TCGA-24-1846-01A 73 5 5'UTR-CDS Intra-chr q24.1 q24.1 Seq+ 97222 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPHOSPH10-ATP6V1B1 MPHOSPH10 chr2 71134797 + ATP6V1B1 chr2 70958046 + Exonic hg38 OV TCGA-24-1846-01A 20 4 In-Frame Intra-chr p13.3 p13.3 Seq+ 97223 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGS-SPAG5 PIGS chr17 28560049 - SPAG5 chr17 28586499 - Exonic hg38 OV TCGA-24-1847-01A 43 12 In-Frame Intra-chr q11.2 q11.2 Seq+ 97224 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF12-TIAF1 PHF12 chr17 28921688 - TIAF1 chr17 29074914 - Exonic hg38 OV TCGA-24-1847-01A 21 21 CDS-5'UTR Intra-chr q11.2 q11.2 Oncogene Seq+ 97225 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKAR1B-GNA12 PRKAR1B chr7 606193 - GNA12 chr7 2733501 - Exonic hg38 OV TCGA-24-1847-01A 8 3 In-Frame Intra-chr p22.3 p22.2 Seq+ 97226 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP214-CACNA1B NUP214 chr9 131164144 + CACNA1B chr9 138112398 + Exonic hg38 OV TCGA-24-1849-01A 14 5 In-Frame Intra-chr q34.13 Oncogene q34.3 Seq+ 97227 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEKT4P2-ERAS TEKT4P2 chr21 9127489 - ERAS chrX 48829081 + Exonic hg38 OV TCGA-24-1850-01A 40 1 3'UTR-5'UTR Inter-chr p11.2 p11.23 97228 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLD3-RPS9 PLD3 chr19 40348768 + RPS9 chr19 54231741 + Exonic hg38 OV TCGA-24-1850-01A 24 8 5'UTR-3'UTR Intra-chr q13.2 Seq+ 97229 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIRREL-HMMR KIRREL chr1 157993728 + HMMR chr5 163463856 + Exonic hg38 OV TCGA-24-1850-01A 17 1 Out-of-frame Inter-chr q23.1 q34 Seq+ 97230 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHMT1-SPATA17 EHMT1 chr9 137619049 + SPATA17 chr1 217683258 + Exonic hg38 OV TCGA-24-1924-01A 37 1 In-Frame Inter-chr q34.3 q41 Seq+ 97231 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP3-RAD18 SRGAP3 chr3 9047391 - RAD18 chr3 8890451 - Exonic hg38 OV TCGA-24-1924-01A 12 4 Out-of-frame Intra-chr p25.3 Tumor suppressor gene p25.3 Seq+ 97232 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK2-RTN3 MARK2 chr11 63839560 + RTN3 chr11 63749991 + Exonic hg38 OV TCGA-24-1924-01A 2 0 Out-of-frame Intra-chr q13.1 CAMK:CAMKL q13.1 Seq+ 97233 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1A-NUDC ARID1A chr1 26732792 + NUDC chr1 26941457 + Exonic hg38 OV TCGA-24-1928-01A 103 20 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 Seq+ 97234 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCA4-CARM1 SMARCA4 chr19 10961174 + CARM1 chr19 10912184 + Exonic hg38 OV TCGA-24-1928-01A 45 9 5'UTR-CDS Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 97235 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM47E-TMEM184B FAM47E chr4 76263843 + TMEM184B chr22 38248019 - Exonic hg38 OV TCGA-24-1928-01A 37 3 CDS-5'UTR Inter-chr q21.1 q13.1 Seq+ 97236 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSC2-NINL DSC2 chr18 31086576 - NINL chr20 25526598 - Exonic hg38 OV TCGA-24-1928-01A 14 0 CDS-5'UTR Inter-chr q12.1 Tumor suppressor gene p11.21 Seq+ 97237 ChimerSeq TCGA FAWG TCGA_RNA-Seq JMJD1C-EGR2 JMJD1C chr10 63521738 - EGR2 chr10 62815969 - Exonic hg38 OV TCGA-24-1928-01A 12 7 5'UTR-5'UTR Intra-chr q21.3 q21.3 Tumor suppressor gene Transcription factor 97238 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYMPK-CRYL1 SYMPK chr19 45848750 - CRYL1 chr13 20413387 - Exonic hg38 OV TCGA-24-1928-01A 11 1 In-Frame Inter-chr q13.32 q12.11 Seq+ 97239 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXNL1-GRP TXNL1 chr18 56610993 - GRP chr18 59225492 + Exonic hg38 OV TCGA-24-1928-01A 10 4 Out-of-frame Intra-chr q21.31 q21.32 Seq+ 97240 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB7C-RAB12 ZBTB7C chr18 48137007 - RAB12 chr18 8624938 + Exonic hg38 OV TCGA-24-1928-01A 9 5 5'UTR-CDS Intra-chr q21.1 Tumor suppressor gene Transcription factor p11.22 Seq+ 97241 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARCH6-UVRAG 2019_ 3_ 6_ chr5 10411537 + UVRAG chr11 76115924 + Exonic hg38 OV TCGA-24-1930-01A 49 4 Out-of-frame Inter-chr p15.2 q13.5 Tumor suppressor gene Seq+ 97242 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOG-STIM1 RHOG chr11 3840894 - STIM1 chr11 3967552 + Exonic hg38 OV TCGA-24-1930-01A 25 3 5'UTR-CDS Intra-chr p15.4 p15.4 Seq+ 97243 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNAZ-MIF GNAZ chr22 23070570 + MIF chr22 23894772 + Exonic hg38 OV TCGA-24-2019-01A 129 14 5'UTR-3'UTR Intra-chr q11.22 q11.23 Tumor suppressor gene Seq+ 97244 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPIN2-RFPL1 LPIN2 chr18 3003431 - RFPL1 chr22 29438945 + Exonic hg38 OV TCGA-24-2019-01A 63 36 Out-of-frame Inter-chr p11.31 q12.2 Seq+ 97245 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST3GAL2-CATSPERB ST3GAL2 chr16 70438949 - CATSPERB chr14 91581107 - Exonic hg38 OV TCGA-24-2019-01A 65 16 5'UTR-5'UTR Inter-chr q22.1 Seq+ 97246 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC21-PSIP1 ZDHHC21 chr9 14680033 - PSIP1 chr9 15472750 - Exonic hg38 OV TCGA-24-2019-01A 40 8 5'UTR-CDS Intra-chr p22.3 p22.3 Oncogene Seq+ 97247 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOB2-PRR33 MOB2 chr11 1471295 - PRR33 chr11 1890593 - Exonic hg38 OV TCGA-24-2019-01A 39 9 Out-of-frame Intra-chr p15.5 97248 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSPL2-CASC4 CTDSPL2 chr15 44459200 + CASC4 chr15 44379690 + Exonic hg38 OV TCGA-24-2019-01A 33 5 Out-of-frame Intra-chr q15.3 q15.3 Seq+ 97249 ChimerSeq TCGA FAWG TCGA_RNA-Seq NXN-WWOX NXN chr17 979319 - WWOX chr16 79211608 + Exonic hg38 OV TCGA-24-2019-01A 19 4 In-Frame Inter-chr p13.3 q23.1 Tumor suppressor gene Seq+ 97250 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT3-KMT2B CNOT3 chr19 54141479 + KMT2B chr19 35723141 + Exonic hg38 OV TCGA-24-2019-01A 14 5 Out-of-frame Intra-chr Tumor suppressor gene q13.12 Oncogene Transcription factor 97251 ChimerSeq TCGA FAWG TCGA_RNA-Seq OAZ1-ONECUT3 OAZ1 chr19 2269744 + ONECUT3 chr19 1776269 + Exonic hg38 OV TCGA-24-2020-01A 174 31 CDS-3'UTR Intra-chr p13.3 p13.3 Transcription factor Seq+ 97252 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNPO2-PRDX2 TNPO2 chr19 12715439 - PRDX2 chr19 12799875 - Exonic hg38 OV TCGA-24-2020-01A 155 41 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 97253 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRBP1-YWHAE RRBP1 chr20 17679999 - YWHAE chr17 1365058 - Exonic hg38 OV TCGA-24-2020-01A 71 35 5'UTR-5'UTR Inter-chr p12.1 p13.3 Seq+ 97254 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLF6-CREM KLF6 chr10 3784913 - CREM chr10 35148368 + Exonic hg38 OV TCGA-24-2020-01A 68 20 Out-of-frame Intra-chr p15.2 Oncogene Tumor suppressor gene Transcription factor p11.21 Tumor suppressor gene Transcription factor Seq+ 97255 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNTB1-FGGY SNTB1 chr8 120811273 - FGGY chr1 59554124 + Exonic hg38 OV TCGA-24-2020-01A 14 3 In-Frame Inter-chr q24.12 p32.1 Seq+ 97256 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTBP2-KCNMA1 CTBP2 chr10 125160319 - KCNMA1 chr10 77251256 - Exonic hg38 OV TCGA-24-2020-01A 13 3 5'UTR-5'UTR Intra-chr q26.13 q22.3 Seq+ 97257 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNY-ADARB2 CCNY chr10 35337207 + ADARB2 chr10 1379160 - Exonic hg38 OV TCGA-24-2020-01A 9 5 In-Frame Intra-chr p11.21 p15.3 Seq+ 97258 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNC45A-IQGAP1 UNC45A chr15 90940473 + IQGAP1 chr15 90486030 + Exonic hg38 OV TCGA-24-2023-01A 110 17 In-Frame Intra-chr q26.1 q26.1 Seq+ 97259 ChimerSeq TCGA FAWG TCGA_RNA-Seq INPP5A-C10orf91 INPP5A chr10 132538171 + C10orf91 chr10 132445696 + Exonic hg38 OV TCGA-24-2023-01A 45 11 CDS-5'UTR Intra-chr q26.3 q26.3 Seq+ 97260 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF214-PAFAH1B2 RNF214 chr11 117244585 + PAFAH1B2 chr11 117171622 + Exonic hg38 OV TCGA-24-2023-01A 42 9 In-Frame Intra-chr q23.3 q23.3 Seq+ 97261 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP32-NPTN USP32 chr17 60391882 - NPTN chr15 73573795 - Exonic hg38 OV TCGA-24-2023-01A 34 8 In-Frame Inter-chr q23.2 q24.1 Seq+ 97262 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP13A3-IQCG ATP13A3 chr3 194450145 - IQCG chr3 197892759 - Exonic hg38 OV TCGA-24-2023-01A 33 9 Out-of-frame Intra-chr q29 q29 Seq+ 97263 ChimerSeq TCGA FAWG TCGA_RNA-Seq GBX1-PRKAG2 GBX1 chr7 151167011 - PRKAG2 chr7 151675637 - Exonic hg38 OV TCGA-24-2023-01A 21 2 In-Frame Intra-chr q36.1 Transcription factor q36.1 Seq+ 97264 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDIA5-CASR PDIA5 chr3 123111004 + CASR chr3 122253948 + Exonic hg38 OV TCGA-24-2023-01A 15 3 5'UTR-5'UTR Intra-chr q21.1 q13.33 Seq+ 97265 ChimerSeq TCGA FAWG TCGA_RNA-Seq GON4L-RIT1 GON4L chr1 155820606 - RIT1 chr1 155904804 - Exonic hg38 OV TCGA-24-2023-01A 14 0 Out-of-frame Intra-chr q22 q22 Seq+ 97266 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3R3-RDH10 PIK3R3 chr1 46131847 - RDH10 chr8 73297194 + Exonic hg38 OV TCGA-24-2023-01A 11 7 In-Frame Inter-chr p34.1 q21.11 Seq+ 97267 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM1-YARS PUM1 chr1 31028796 - YARS chr1 32811057 - Exonic hg38 OV TCGA-24-2023-01A 10 2 In-Frame Intra-chr p35.2 p35.1 Seq+ 97268 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIAS3-REN PIAS3 chr1 145859665 - REN chr1 204162163 - Exonic hg38 OV TCGA-24-2024-01A 96 19 5'UTR-CDS Intra-chr q21.1 q32.1 Seq+ 97269 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL23A1-FAM193B COL23A1 chr5 178560682 - FAM193B chr5 177520181 - Exonic hg38 OV TCGA-24-2024-01A 65 13 CDS-3'UTR Intra-chr q35.3 q35.3 Seq+ 97270 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM179B-SCGB1D1 TMEM179B chr11 62787527 + SCGB1D1 chr11 62192056 + Exonic hg38 OV TCGA-24-2026-01A 84 18 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 97271 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWP2-TANGO6 WWP2 chr16 69787080 + TANGO6 chr16 68974028 + Exonic hg38 OV TCGA-24-2026-01A 52 16 In-Frame Intra-chr q22.1 q22.1 Seq+ 97272 ChimerSeq TCGA FAWG TCGA_RNA-Seq C10orf11-MIEN1 C10orf11 chr10 75438494 + MIEN1 chr17 39730291 - Exonic hg38 OV TCGA-24-2026-01A 28 0 Out-of-frame Inter-chr q12 97273 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD33B-ADAMTS16 ANKRD33B chr5 10564833 + ADAMTS16 chr5 5232368 + Exonic hg38 OV TCGA-24-2026-01A 21 4 In-Frame Intra-chr p15.2 p15.32 Seq+ 97274 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRSS23-CCDC81 PRSS23 chr11 86950499 + CCDC81 chr11 86407614 + Exonic hg38 OV TCGA-24-2026-01A 21 2 5'UTR-CDS Intra-chr q14.2 q14.2 Seq+ 97275 ChimerSeq TCGA FAWG TCGA_RNA-Seq PILRB-SLC22A20 PILRB chr7 100353123 + SLC22A20 chr11 65241990 + Exonic hg38 OV TCGA-24-2026-01A 19 2 Out-of-frame Inter-chr q22.1 q13.1 Seq+ 97276 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE4B-PIK3CD UBE4B chr1 10033694 + PIK3CD chr1 9691467 + Exonic hg38 OV TCGA-24-2026-01A 18 6 CDS-5'UTR Intra-chr p36.22 Tumor suppressor gene p36.22 Oncogene Seq+ 97277 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVRIG2P-SLC22A20 PVRIG2P chr7 100353123 + SLC22A20 chr11 65241990 + Exonic hg38 OV TCGA-24-2026-01A 19 1 Out-of-frame Inter-chr q22.1 q13.1 Seq+ 97278 ChimerSeq TCGA FAWG TCGA_RNA-Seq HTT-CFAP99 HTT chr4 3215211 + CFAP99 chr4 2458723 + Exonic hg38 OV TCGA-24-2026-01A 18 3 Out-of-frame Intra-chr p16.3 p16.3 97279 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS37B-MPHOSPH9 VPS37B chr12 122895952 - MPHOSPH9 chr12 123181210 - Exonic hg38 OV TCGA-24-2026-01A 17 3 In-Frame Intra-chr q24.31 q24.31 Seq+ 97280 ChimerSeq TCGA FAWG TCGA_RNA-Seq SS18-CHST9 SS18 chr18 26039289 - CHST9 chr18 26944366 - Exonic hg38 OV TCGA-24-2026-01A 13 10 In-Frame Intra-chr q11.2 q11.2 Seq+ 97281 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM12-NFS1 RBM12 chr20 35664760 - NFS1 chr20 35669685 - Exonic hg38 OV TCGA-24-2026-01A 10 0 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 97282 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC41-TAL1 LRRC41 chr1 46297563 - TAL1 chr1 47229351 - Exonic hg38 OV TCGA-24-2026-01A 7 3 CDS-5'UTR Intra-chr p33 p33 Oncogene Transcription factor Seq+ 97283 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L1-ROMO1 EPB41L1 chr20 36208346 + ROMO1 chr20 35699518 + Exonic hg38 OV TCGA-24-2026-01A 5 6 Out-of-frame Intra-chr q11.23 q11.22 Seq+ 97284 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHP1-RAD51B CHP1 chr15 41256990 + RAD51B chr14 68291884 + Exonic hg38 OV TCGA-24-2027-01A 18 8 Out-of-frame Inter-chr q15.1 q24.1 Seq+ 97285 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSUN6-ARMS2 NSUN6 chr10 18651129 - ARMS2 chr10 122456907 + Exonic hg38 OV TCGA-24-2027-01A 17 0 In-Frame Intra-chr p12.31 q26.13 Seq+ 97286 ChimerSeq TCGA FAWG TCGA_RNA-Seq INSR-ERCC1 INSR chr19 7293792 - ERCC1 chr19 45423381 - Exonic hg38 OV TCGA-24-2027-01A 15 6 CDS-5'UTR Intra-chr p13.2 TK:InsR q13.32 Oncogene Seq+ 97287 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEA1-THSD4 MEA1 chr6 43012926 - THSD4 chr15 71411687 + Exonic hg38 OV TCGA-24-2027-01A 12 3 In-Frame Inter-chr p21.1 q23 Seq+ 97288 ChimerSeq TCGA FAWG TCGA_RNA-Seq NTN1-PKD2L2 NTN1 chr17 9182969 + PKD2L2 chr5 137942384 + Exonic hg38 OV TCGA-24-2027-01A 10 3 CDS-3'UTR Inter-chr p13.1 q31.2 Seq+ 97289 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA3-PARD3B NCOA3 chr20 47583261 + PARD3B chr2 204965152 + Exonic hg38 OV TCGA-24-2027-01A 6 4 5'UTR-CDS Inter-chr q13.12 Transcription factor q33.3 Seq+ 97290 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK1-NARS2 PAK1 chr11 77473552 - NARS2 chr11 78478683 - Exonic hg38 OV TCGA-24-2033-01A 64 9 5'UTR-CDS Intra-chr q14.1 STE:STE20 q14.1 Seq+ 97291 ChimerSeq TCGA FAWG TCGA_RNA-Seq GADD45GIP1-DAND5 GADD45GIP1 chr19 12956863 - DAND5 chr19 12973389 + Exonic hg38 OV TCGA-24-2033-01A 26 1 Out-of-frame Intra-chr p13.13 Tumor suppressor gene p13.13 Seq+ 97292 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX39A-ADGRE3 DDX39A chr19 14413013 - ADGRE3 chr19 14651204 - Exonic hg38 OV TCGA-24-2033-01A 23 4 In-Frame Intra-chr p13.12 p13.12 97293 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL14-CCDC178 KLHL14 chr18 32769645 - CCDC178 chr18 32938091 - Exonic hg38 OV TCGA-24-2033-01A 23 3 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 97294 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS13-NIPAL2 TMPRSS13 chr11 117929287 - NIPAL2 chr8 98236214 - Exonic hg38 OV TCGA-24-2033-01A 14 1 Out-of-frame Inter-chr q23.3 q22.2 Seq+ 97295 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP53-SYNPO2 USP53 chr4 119217673 + SYNPO2 chr4 119023430 + Exonic hg38 OV TCGA-24-2033-01A 7 1 5'UTR-CDS Intra-chr q26 q26 Tumor suppressor gene Seq+ 97296 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-PPP1R1B ERBB2 chr17 39700311 + PPP1R1B chr17 39629170 + Exonic hg38 OV TCGA-24-2033-01A 2 0 Out-of-frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 97297 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPY19L4-SNTG1 DPY19L4 chr8 94726441 + SNTG1 chr8 50792671 + Exonic hg38 OV TCGA-24-2035-01A 17 3 Out-of-frame Intra-chr q22.1 q11.21 Seq+ 97298 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLD-BCAP29 DLD chr7 107906368 + BCAP29 chr7 107600397 + Exonic hg38 OV TCGA-24-2035-01A 16 2 CDS-3'UTR Intra-chr q31.1 Seq+ 97299 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNC2H1-CCDC60 DYNC2H1 chr11 103259977 + CCDC60 chr12 119505069 + Exonic hg38 OV TCGA-24-2036-01A 18 4 In-Frame Inter-chr q22.3 q24.23 Seq+ 97300 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAREM1-DNAH9 GAREM1 chr18 32392895 - DNAH9 chr17 11869134 + Exonic hg38 OV TCGA-24-2036-01A 10 0 Out-of-frame Inter-chr q12.1 p12 97301 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3GL1-MGAT5B SH3GL1 chr19 4361679 - MGAT5B chr17 76937988 + Exonic hg38 OV TCGA-24-2036-01A 9 3 In-Frame Inter-chr p13.3 q25.2 Seq+ 97302 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D9-PAPSS1 TBC1D9 chr4 140755916 - PAPSS1 chr4 107614387 - Exonic hg38 OV TCGA-24-2261-01A 27 2 Out-of-frame Intra-chr q31.21 q25 Seq+ 97303 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACAP2-APOD ACAP2 chr3 195381009 - APOD chr3 195573971 - Exonic hg38 OV TCGA-24-2262-01A 323 36 In-Frame Intra-chr q29 q29 Seq+ 97304 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDHAF2-CD5 SDHAF2 chr11 61430182 + CD5 chr11 61123884 + Exonic hg38 OV TCGA-24-2262-01A 78 2 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 97305 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2O-RHBDF2 UBE2O chr17 76452725 - RHBDF2 chr17 76481545 - Exonic hg38 OV TCGA-24-2262-01A 57 4 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 97306 ChimerSeq TCGA FAWG TCGA_RNA-Seq VTI1A-GTF2H5 VTI1A chr10 112538330 + GTF2H5 chr6 158191977 + Exonic hg38 OV TCGA-24-2262-01A 28 2 Out-of-frame Inter-chr q25.2 q25.3 Seq+ 97307 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP54-CASC2 USP54 chr10 73536269 - CASC2 chr10 118098196 + Exonic hg38 OV TCGA-24-2262-01A 28 1 CDS-5'UTR Intra-chr q22.2 q26.11 Tumor suppressor gene Seq+ 97308 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK2-C11orf84 MARK2 chr11 63905043 + C11orf84 chr11 63826928 + Exonic hg38 OV TCGA-24-2262-01A 17 9 Out-of-frame Intra-chr q13.1 CAMK:CAMKL q13.1 Seq+ 97309 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRADD-GFOD2 TRADD chr16 67159838 - GFOD2 chr16 67685802 - Exonic hg38 OV TCGA-24-2262-01A 11 1 5'UTR-5'UTR Intra-chr q22.1 q22.1 Seq+ 97310 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH1L-C1orf61 ASH1L chr1 155521100 - C1orf61 chr1 156430119 - Exonic hg38 OV TCGA-24-2262-01A 10 3 CDS-5'UTR Intra-chr q22 Transcription factor q22 Seq+ 97311 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANBP2-SULT1C3 RANBP2 chr2 108758548 + SULT1C3 chr2 108253345 + Exonic hg38 OV TCGA-24-2262-01A 9 0 In-Frame Intra-chr q13 q12.3 Seq+ 97312 ChimerSeq TCGA FAWG TCGA_RNA-Seq DVL2-CST6 DVL2 chr17 7230728 - CST6 chr11 66012186 + Exonic hg38 OV TCGA-24-2262-01A 8 3 CDS-3'UTR Inter-chr p13.1 q13.1 Tumor suppressor gene Seq+ 97313 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAM10-MYO1E ADAM10 chr15 58717577 - MYO1E chr15 59188216 - Exonic hg38 OV TCGA-24-2262-01A 7 2 In-Frame Intra-chr q21.3 q22.2 Seq+ 97314 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR2C-HS3ST4 POLR2C chr16 57463078 + HS3ST4 chr16 26135612 + Exonic hg38 OV TCGA-24-2262-01A 7 2 Out-of-frame Intra-chr q21 p12.1 Seq+ 97315 ChimerSeq TCGA FAWG TCGA_RNA-Seq USB1-MAPKAPK5 USB1 chr16 58017439 + MAPKAPK5 chr12 111871085 + Exonic hg38 OV TCGA-24-2262-01A 6 2 In-Frame Inter-chr q21 q24.12 CAMK:MAPKAPK Seq+ 97316 ChimerSeq TCGA FAWG TCGA_RNA-Seq APAF1-TMPO APAF1 chr12 98662806 + TMPO chr12 98537475 + Exonic hg38 OV TCGA-24-2262-01A 5 4 In-Frame Intra-chr q23.1 Tumor suppressor gene q23.1 Seq+ 97317 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF19A-KHDRBS2 RNF19A chr8 100309867 - KHDRBS2 chr6 62177312 - Exonic hg38 OV TCGA-24-2262-01A 5 3 5'UTR-CDS Inter-chr q22.2 q11.1 Seq+ 97318 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2K2-PSMA1 MAP2K2 chr19 4110509 - PSMA1 chr11 14505248 - Exonic hg38 OV TCGA-24-2267-01A 127 3 In-Frame Inter-chr p13.3 STE:STE7 Oncogene p15.2 Seq+ 97319 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1orf186-SRGAP2 C1orf186 chr1 206060449 + SRGAP2 chr1 206430162 + Exonic hg38 OV TCGA-24-2267-01A 79 13 Out-of-frame Intra-chr q32.1 q32.1 Tumor suppressor gene Seq+ 97320 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR74-SNHG1 WDR74 chr11 62839114 - SNHG1 chr11 62854064 - Exonic hg38 OV TCGA-24-2267-01A 21 1 3'UTR-3'UTR Intra-chr q12.3 q12.3 Seq+ 97321 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP40-PMVK USP40 chr2 233540662 - PMVK chr1 154926483 - Exonic hg38 OV TCGA-24-2267-01A 17 2 In-Frame Inter-chr q37.1 q21.3 Seq+ 97322 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNLRB1-ITCH DYNLRB1 chr20 34516461 + ITCH chr20 34504331 + Exonic hg38 OV TCGA-24-2267-01A 17 0 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 97323 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2-DEPTOR MAP2 chr2 209424276 + DEPTOR chr8 120049576 + Exonic hg38 OV TCGA-24-2267-01A 13 4 5'UTR-CDS Inter-chr q34 q24.12 Seq+ 97324 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX16-MDC1 DHX16 chr6 30659472 - MDC1 chr6 30706098 - Exonic hg38 OV TCGA-24-2267-01A 12 2 5'UTR-5'UTR Intra-chr Tumor suppressor gene Seq+ 97325 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD5-GXYLT2 SETD5 chr3 9397977 + GXYLT2 chr3 72922204 + Exonic hg38 OV TCGA-24-2267-01A 9 2 5'UTR-5'UTR Intra-chr p25.3 p13 Seq+ 97326 ChimerSeq TCGA FAWG TCGA_RNA-Seq ME3-SYTL2 ME3 chr11 86671762 - SYTL2 chr11 85700593 - Exonic hg38 OV TCGA-24-2267-01A 7 0 In-Frame Intra-chr q14.2 q14.1 Seq+ 97327 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM91A1-TRMT12 FAM91A1 chr8 123780542 + TRMT12 chr8 124462027 + Exonic hg38 OV TCGA-24-2271-01A 6 1 CDS-3'UTR Intra-chr q24.13 q24.13 Seq+ 97328 ChimerSeq TCGA FAWG TCGA_RNA-Seq MECOM-LRRC31 MECOM chr3 169663336 - LRRC31 chr3 169856872 - Exonic hg38 OV TCGA-24-2271-01A 6 0 In-Frame Intra-chr q26.2 Transcription factor q26.2 Seq+ 97329 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF3-LINGO3 ARHGEF3 chr3 57035088 - LINGO3 chr19 2291822 - Exonic hg38 OV TCGA-24-2271-01A 5 2 CDS-5'UTR Inter-chr p14.3 p13.3 Seq+ 97330 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4-DNAH12 MAP4 chr3 48088773 - DNAH12 chr3 57357348 - Exonic hg38 OV TCGA-24-2271-01A 3 4 5'UTR-CDS Intra-chr p21.31 p14.3 97331 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1XR1-CTNNB1 TBL1XR1 chr3 177197121 - CTNNB1 chr3 41233341 + Exonic hg38 OV TCGA-24-2280-01A 42 18 5'UTR-CDS Intra-chr q26.32 p22.1 Oncogene Seq+ 97332 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANGAP1-PMM1 RANGAP1 chr22 41268097 - PMM1 chr22 41578881 - Exonic hg38 OV TCGA-24-2280-01A 35 5 In-Frame Intra-chr q13.2 q13.2 Seq+ 97333 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLSTN1-SERTAD1 CLSTN1 chr1 9823643 - SERTAD1 chr19 40423546 - Exonic hg38 OV TCGA-24-2280-01A 20 1 CDS-5'UTR Inter-chr p36.22 q13.2 Seq+ 97334 ChimerSeq TCGA FAWG TCGA_RNA-Seq GGT7-SLA2 GGT7 chr20 34872647 - SLA2 chr20 36615374 - Exonic hg38 OV TCGA-24-2280-01A 11 0 In-Frame Intra-chr q11.22 q11.23 Seq+ 97335 ChimerSeq TCGA FAWG TCGA_RNA-Seq RDH13-EXOC3L2 RDH13 chr19 55042307 - EXOC3L2 chr19 45234715 - Exonic hg38 OV TCGA-24-2280-01A 9 5 Out-of-frame Intra-chr q13.32 97336 ChimerSeq TCGA FAWG TCGA_RNA-Seq HN1-ARMC7 HN1 chr17 75146666 - ARMC7 chr17 75128677 + Exonic hg38 OV TCGA-24-2280-01A 9 2 Out-of-frame Intra-chr q25.1 Seq+ 97337 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACVR1-NFATC1 ACVR1 chr2 157818385 - NFATC1 chr18 79486248 + Exonic hg38 OV TCGA-24-2281-01A 310 31 5'UTR-CDS Inter-chr q24.1 q23 Transcription factor Seq+ 97338 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPL-RPS19BP1 HNRNPL chr19 38843842 - RPS19BP1 chr22 39529917 - Exonic hg38 OV TCGA-24-2281-01A 46 9 5'UTR-CDS Inter-chr q13.1 Seq+ 97339 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIBCH-DLX1 HIBCH chr2 190294546 - DLX1 chr2 172088003 + Exonic hg38 OV TCGA-24-2281-01A 33 3 In-Frame Intra-chr q32.2 q31.1 Transcription factor Seq+ 97340 ChimerSeq TCGA FAWG TCGA_RNA-Seq TARDBP-ATAD3A TARDBP chr1 11012743 + ATAD3A chr1 1533926 + Exonic hg38 OV TCGA-24-2281-01A 7 24 5'UTR-CDS Intra-chr p36.22 p36.33 Seq+ 97341 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP42-HIBCH ARHGAP42 chr11 100795166 + HIBCH chr2 190213075 - Exonic hg38 OV TCGA-24-2281-01A 10 0 In-Frame Inter-chr q22.1 q32.2 Seq+ 97342 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMP7-RBM38 BMP7 chr20 57174931 - RBM38 chr20 57407543 + Exonic hg38 OV TCGA-24-2288-01A 414 55 Out-of-frame Intra-chr q13.31 q13.31 Tumor suppressor gene Seq+ 97343 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPON1-STXBP6 SPON1 chr11 13963142 + STXBP6 chr14 24857157 - Exonic hg38 OV TCGA-24-2288-01A 188 14 In-Frame Inter-chr p15.2 q12 Seq+ 97344 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOR1AIP2-ACBD6 TOR1AIP2 chr1 179877239 - ACBD6 chr1 180314722 - Exonic hg38 OV TCGA-24-2288-01A 71 6 5'UTR-CDS Intra-chr q25.2 q25.3 Seq+ 97345 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD5-CIDEC SETD5 chr3 9424526 + CIDEC chr3 9878511 - Exonic hg38 OV TCGA-24-2288-01A 55 10 5'UTR-5'UTR Intra-chr p25.3 p25.3 Seq+ 97346 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNS3-SUN3 TNS3 chr7 47582427 - SUN3 chr7 47996146 - Exonic hg38 OV TCGA-24-2288-01A 29 2 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 97347 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R2A-DHTKD1 PPP2R2A chr8 26293740 + DHTKD1 chr10 12081472 + Exonic hg38 OV TCGA-24-2288-01A 15 0 In-Frame Inter-chr p21.2 p14 Seq+ 97348 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA3-LRRC49 NCOA3 chr20 47502019 + LRRC49 chr15 71009807 + Exonic hg38 OV TCGA-24-2288-01A 11 0 5'UTR-CDS Inter-chr q13.12 Transcription factor q23 Seq+ 97349 ChimerSeq TCGA FAWG TCGA_RNA-Seq C10orf11-MYO1D C10orf11 chr10 76058783 + MYO1D chr17 32494915 - Exonic hg38 OV TCGA-24-2288-01A 10 2 Out-of-frame Inter-chr q11.2 Seq+ 97350 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF20-EPB41L1 PHF20 chr20 35801605 + EPB41L1 chr20 36197859 + Exonic hg38 OV TCGA-24-2288-01A 9 0 Out-of-frame Intra-chr q11.22 Transcription factor q11.23 Seq+ 97351 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMK1D-BNIP3L CAMK1D chr10 12349910 + BNIP3L chr8 26391243 + Exonic hg38 OV TCGA-24-2288-01A 8 1 Out-of-frame Inter-chr p13 p21.2 Tumor suppressor gene Seq+ 97352 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2IP4-TYW1B GTF2IP4 chr7 73155343 + TYW1B chr7 72744601 - Exonic hg38 OV TCGA-24-2288-01A 7 0 5'UTR-CDS Intra-chr q11.23 q11.23 97353 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERP27-IGF2 ERP27 chr12 14914623 - IGF2 chr11 2131861 - Exonic hg38 OV TCGA-24-2288-01A 3 5 Out-of-frame Inter-chr p12.3 p15.5 Oncogene Seq+ 97354 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS37B-ABCB9 VPS37B chr12 122895952 - ABCB9 chr12 122932328 - Exonic hg38 OV TCGA-24-2289-01A 44 1 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 97355 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRWD1-DSCAM BRWD1 chr21 39269899 - DSCAM chr21 40013386 - Exonic hg38 OV TCGA-24-2289-01A 36 8 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 97356 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELF1-STK32A CELF1 chr11 47486750 - STK32A chr5 147323898 + Exonic hg38 OV TCGA-24-2289-01A 10 3 Out-of-frame Inter-chr p11.2 q32 Seq+ 97357 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP3CC-PIWIL2 PPP3CC chr8 22441458 + PIWIL2 chr8 22314328 + Exonic hg38 OV TCGA-24-2289-01A 9 3 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.3 Tumor suppressor gene Seq+ 97358 ChimerSeq TCGA FAWG TCGA_RNA-Seq SF3B3-CTCF SF3B3 chr16 70544533 + CTCF chr16 67626555 + Exonic hg38 OV TCGA-24-2289-01A 8 7 Out-of-frame Intra-chr q22.1 q22.1 Tumor suppressor gene Transcription factor Seq+ 97359 ChimerSeq TCGA FAWG TCGA_RNA-Seq EBAG9-PKHD1L1 EBAG9 chr8 109553943 + PKHD1L1 chr8 109526784 + Exonic hg38 OV TCGA-24-2289-01A 8 2 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 97360 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2A-ANKUB1 EIF2A chr3 150552425 + ANKUB1 chr3 149761613 - Exonic hg38 OV TCGA-24-2290-01A 75 19 In-Frame Intra-chr q25.1 q25.1 Seq+ 97361 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNIP1-MEIKIN FNIP1 chr5 131796830 - MEIKIN chr5 131818863 - Exonic hg38 OV TCGA-24-2290-01A 59 8 Out-of-frame Intra-chr q31.1 q31.1 97362 ChimerSeq TCGA FAWG TCGA_RNA-Seq GANAB-SSRP1 GANAB chr11 62646562 - SSRP1 chr11 57335240 - Exonic hg38 OV TCGA-24-2290-01A 48 0 5'UTR-5'UTR Intra-chr q12.3 Tumor suppressor gene q12.1 Seq+ 97363 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP160-AGBL2 NUP160 chr11 47847848 - AGBL2 chr11 47704728 - Exonic hg38 OV TCGA-24-2290-01A 13 5 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 97364 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A25-CIZ1 SLC25A25 chr9 128068580 + CIZ1 chr9 128170107 - Exonic hg38 OV TCGA-24-2293-01A 38 14 Out-of-frame Intra-chr q34.11 q34.11 Tumor suppressor gene Seq+ 97365 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCC1-SPINK8 SMARCC1 chr3 47680437 - SPINK8 chr3 48309946 - Exonic hg38 OV TCGA-24-2293-01A 19 2 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 97366 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP4R4-UNC79 PPP4R4 chr14 94176127 + UNC79 chr14 93688665 + Exonic hg38 OV TCGA-24-2293-01A 13 8 3'UTR-3'UTR Intra-chr q32.12 Seq+ 97367 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPR1-DRC3 XPR1 chr1 180632270 + DRC3 chr17 18016064 + Exonic hg38 OV TCGA-24-2297-01A 493 27 In-Frame Inter-chr q25.3 p11.2 97368 ChimerSeq TCGA FAWG TCGA_RNA-Seq SORL1-TBCEL SORL1 chr11 121522989 + TBCEL chr11 121086778 + Exonic hg38 OV TCGA-24-2297-01A 54 3 Out-of-frame Intra-chr q24.1 q23.3 Seq+ 97369 ChimerSeq TCGA FAWG TCGA_RNA-Seq GORASP2-MYO3B GORASP2 chr2 170929403 + MYO3B chr2 170651628 + Exonic hg38 OV TCGA-24-2297-01A 41 1 Out-of-frame Intra-chr q31.1 q31.1 STE:STE20 Seq+ 97370 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB4-RBM33 ERBB4 chr2 212538449 - RBM33 chr7 155774559 + Exonic hg38 OV TCGA-24-2297-01A 32 5 Out-of-frame Inter-chr q34 Oncogene Tumor suppressor gene q36.3 Seq+ 97371 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R9A-FBXO16 PPP1R9A chr7 94911508 + FBXO16 chr8 28452476 - Exonic hg38 OV TCGA-24-2297-01A 31 2 In-Frame Inter-chr q21.3 p21.1 Seq+ 97372 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN14-ADARB2 TSPAN14 chr10 80489314 + ADARB2 chr10 1379160 - Exonic hg38 OV TCGA-24-2297-01A 30 1 Out-of-frame Intra-chr q23.1 p15.3 Seq+ 97373 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCAR2-PPP3CC CCAR2 chr8 22613136 + PPP3CC chr8 22511086 + Exonic hg38 OV TCGA-24-2297-01A 17 2 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.3 Tumor suppressor gene Seq+ 97374 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUMA1-PDE2A NUMA1 chr11 72069842 - PDE2A chr11 72642326 - Exonic hg38 OV TCGA-24-2297-01A 17 1 5'UTR-CDS Intra-chr q13.4 Oncogene q13.4 Seq+ 97375 ChimerSeq TCGA FAWG TCGA_RNA-Seq UCP2-AHNAK UCP2 chr11 73982721 - AHNAK chr11 62433891 - Exonic hg38 OV TCGA-24-2298-01A 135 6 5'UTR-CDS Intra-chr q13.4 q12.3 Tumor suppressor gene Seq+ 97376 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOMER2-BTBD1 HOMER2 chr15 82952531 - BTBD1 chr15 83018225 - Exonic hg38 OV TCGA-24-2298-01A 87 8 Out-of-frame Intra-chr q25.2 Tumor suppressor gene q25.2 Seq+ 97377 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBOAT1-C1orf210 MBOAT1 chr6 20212136 - C1orf210 chr1 43283368 - Exonic hg38 OV TCGA-24-2298-01A 39 4 CDS-5'UTR Inter-chr p22.3 p34.2 Seq+ 97378 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK1-SARM1 TAOK1 chr17 29391024 + SARM1 chr17 28395905 + Exonic hg38 OV TCGA-24-2298-01A 24 2 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 97379 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP1-IFIH1 AGAP1 chr2 235494849 + IFIH1 chr2 162310933 - Exonic hg38 OV TCGA-24-2298-01A 15 2 Out-of-frame Intra-chr q37.2 q24.2 Seq+ 97380 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRAMD4-RIBC2 GRAMD4 chr22 46577290 + RIBC2 chr22 45430900 + Exonic hg38 OV TCGA-24-2298-01A 14 0 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 97381 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 59906122 - RET chr10 43100459 + Exonic hg38 OV TCGA-24-2298-01A 2 0 Out-of-frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 97382 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENOX1-RAD51B ENOX1 chr13 43786652 - RAD51B chr14 68468172 + Exonic hg38 OV TCGA-25-1312-01A 11 5 5'UTR-CDS Inter-chr q14.11 q24.1 Seq+ 97383 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAST1-TNFRSF19 MAST1 chr19 12841066 + TNFRSF19 chr13 23615867 + Exonic hg38 OV TCGA-25-1312-01A 11 2 Out-of-frame Inter-chr p13.13 AGC:MAST q12.12 Seq+ 97384 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRIP1-SH3BGR NRIP1 chr21 15014344 - SH3BGR chr21 39462375 + Exonic hg38 OV TCGA-25-1312-01A 9 1 5'UTR-5'UTR Intra-chr q21.1 q22.2 Seq+ 97385 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIDO1-LRRC4B DIDO1 chr20 62911190 - LRRC4B chr19 50519415 - Exonic hg38 OV TCGA-25-1313-01A 26 9 Out-of-frame Inter-chr q13.33 Tumor suppressor gene q13.33 Seq+ 97386 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF433-DNAH17 ZNF433 chr19 12035537 - DNAH17 chr17 78551638 - Exonic hg38 OV TCGA-25-1313-01A 22 19 Out-of-frame Inter-chr p13.2 Transcription factor q25.3 Seq+ 97387 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTLL11-VWCE TTLL11 chr9 122039272 - VWCE chr11 61282905 - Exonic hg38 OV TCGA-25-1313-01A 18 4 In-Frame Inter-chr q33.2 q12.2 Seq+ 97388 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPIN2-TRAT1 LPIN2 chr18 3013087 - TRAT1 chr3 108847068 + Exonic hg38 OV TCGA-25-1313-01A 17 5 5'UTR-CDS Inter-chr p11.31 q13.13 Seq+ 97389 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK9-UBL7 MAPK9 chr5 180291848 - UBL7 chr15 74456671 - Exonic hg38 OV TCGA-25-1314-01A 118 29 5'UTR-CDS Inter-chr q35.3 Tumor suppressor gene q24.1 Seq+ 97390 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK26-SAGE3P STK26 chrX 132023659 + SAGE3P chrX 135642375 - Exonic hg38 OV TCGA-25-1314-01A 41 9 Out-of-frame Intra-chr q26.2 q26.3 97391 ChimerSeq TCGA FAWG TCGA_RNA-Seq STRBP-SLC35D2 STRBP chr9 123268436 - SLC35D2 chr9 96368305 - Exonic hg38 OV TCGA-25-1314-01A 20 3 5'UTR-CDS Intra-chr q33.3 q22.32 Seq+ 97392 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBL7-MAPK9 UBL7 chr15 74458684 - MAPK9 chr5 180280608 - Exonic hg38 OV TCGA-25-1314-01A 15 4 CDS-5'UTR Inter-chr q24.1 q35.3 Tumor suppressor gene Seq+ 97393 ChimerSeq TCGA FAWG TCGA_RNA-Seq JUP-SCGB2B2 JUP chr17 41768969 - SCGB2B2 chr19 34632640 - Exonic hg38 OV TCGA-25-1315-01A 73 35 CDS-5'UTR Inter-chr q21.2 Tumor suppressor gene q13.11 Seq+ 97394 ChimerSeq TCGA FAWG TCGA_RNA-Seq UCK2-PBX1 UCK2 chr1 165827932 + PBX1 chr1 164792494 + Exonic hg38 OV TCGA-25-1315-01A 36 32 Out-of-frame Intra-chr q24.1 q23.3 Oncogene Transcription factor Seq+ 97395 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPC-CHD8 HNRNPC chr14 21269298 - CHD8 chr14 21431858 - Exonic hg38 OV TCGA-25-1315-01A 36 7 5'UTR-5'UTR Intra-chr q11.2 q11.2 Seq+ 97396 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD13C-OR5V1 ANKRD13C chr1 70300764 - OR5V1 chr6 29356277 - Exonic hg38 OV TCGA-25-1315-01A 19 12 CDS-5'UTR Inter-chr p31.1 Seq+ 97397 ChimerSeq TCGA FAWG TCGA_RNA-Seq LTBP2-NEK9 LTBP2 chr14 74532426 - NEK9 chr14 75091478 - Exonic hg38 OV TCGA-25-1315-01A 12 1 In-Frame Intra-chr q24.3 q24.3 Other:NEK Seq+ 97398 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELOVL5-GLO1 ELOVL5 chr6 53348817 - GLO1 chr6 38686974 - Exonic hg38 OV TCGA-25-1318-01A 13 18 5'UTR-CDS Intra-chr p12.1 p21.2 Seq+ 97399 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALT5-SPATA2 B4GALT5 chr20 49640478 - SPATA2 chr20 49908592 - Exonic hg38 OV TCGA-25-1318-01A 6 4 CDS-5'UTR Intra-chr q13.13 q13.13 Seq+ 97400 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASNA1-RLN3 ASNA1 chr19 12738658 + RLN3 chr19 14030710 + Exonic hg38 OV TCGA-25-1319-01A 153 72 Out-of-frame Intra-chr p13.13 p13.12 Seq+ 97401 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF791-RNASEH2A ZNF791 chr19 12611082 + RNASEH2A chr19 12807008 + Exonic hg38 OV TCGA-25-1319-01A 97 42 Out-of-frame Intra-chr p13.13 Transcription factor p13.13 Seq+ 97402 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF443-MYO9B ZNF443 chr19 12440912 - MYO9B chr19 17192746 + Exonic hg38 OV TCGA-25-1319-01A 40 35 In-Frame Intra-chr p13.2 Transcription factor p13.11 Seq+ 97403 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK1-POU5F1B PAK1 chr11 77473552 - POU5F1B chr8 127414888 + Exonic hg38 OV TCGA-25-1319-01A 20 14 5'UTR-5'UTR Inter-chr q14.1 STE:STE20 q24.21 Transcription factor Seq+ 97404 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBBP4-HIVEP3 RBBP4 chr1 32672901 + HIVEP3 chr1 41628947 - Exonic hg38 OV TCGA-25-1319-01A 19 6 CDS-5'UTR Intra-chr p35.1 p34.2 Tumor suppressor gene Transcription factor Seq+ 97405 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOOK2-ZC3H8 HOOK2 chr19 12763127 - ZC3H8 chr2 112214711 - Exonic hg38 OV TCGA-25-1319-01A 15 4 Out-of-frame Inter-chr p13.13 q14.1 Transcription factor Seq+ 97406 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF684-CPA6 ZNF684 chr1 40533181 + CPA6 chr8 67624251 - Exonic hg38 OV TCGA-25-1319-01A 12 8 Out-of-frame Inter-chr p34.2 Transcription factor q13.2 Seq+ 97407 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJB1-MED26 DNAJB1 chr19 14516466 - MED26 chr19 16578409 - Exonic hg38 OV TCGA-25-1319-01A 10 11 In-Frame Intra-chr p13.12 Tumor suppressor gene p13.11 Seq+ 97408 ChimerSeq TCGA FAWG TCGA_RNA-Seq ILVBL-TECR ILVBL chr19 15115850 - TECR chr19 14562525 + Exonic hg38 OV TCGA-25-1319-01A 6 5 In-Frame Intra-chr p13.12 p13.12 Seq+ 97409 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCHSD2-ZNF564 FCHSD2 chr11 72867865 - ZNF564 chr19 12528696 - Exonic hg38 OV TCGA-25-1319-01A 5 6 In-Frame Inter-chr q13.4 p13.2 Transcription factor Seq+ 97410 ChimerSeq TCGA FAWG TCGA_RNA-Seq TECR-ILVBL TECR chr19 14529711 + ILVBL chr19 15116522 - Exonic hg38 OV TCGA-25-1319-01A 4 7 Out-of-frame Intra-chr p13.12 p13.12 Seq+ 97411 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBLC-PPP1R13L CBLC chr19 44784401 + PPP1R13L chr19 45398339 - Exonic hg38 OV TCGA-25-1320-01A 91 33 CDS-5'UTR Intra-chr q13.32 q13.32 Seq+ 97412 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAT2-ZNF544 BCAT2 chr19 48799675 - ZNF544 chr19 58277183 + Exonic hg38 OV TCGA-25-1320-01A 38 16 Out-of-frame Intra-chr q13.33 q13.43 Transcription factor Seq+ 97413 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN2-STAT6 ATXN2 chr12 111464662 - STAT6 chr12 57099440 - Exonic hg38 OV TCGA-25-1320-01A 35 18 In-Frame Intra-chr q24.12 q13.3 Transcription factor 97414 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGAP3-PTPN12 PGAP3 chr17 39687834 - PTPN12 chr7 77597842 + Exonic hg38 OV TCGA-25-1320-01A 34 7 Out-of-frame Inter-chr q12 Oncogene q11.23 Tumor suppressor gene Seq+ 97415 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF235-DBP ZNF235 chr19 44303390 - DBP chr19 48631052 - Exonic hg38 OV TCGA-25-1320-01A 29 18 CDS-5'UTR Intra-chr q13.31 Transcription factor q13.33 Transcription factor Seq+ 97416 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAT5A-VAC14 STAT5A chr17 42309484 + VAC14 chr16 70692971 - Exonic hg38 OV TCGA-25-1320-01A 21 6 Out-of-frame Inter-chr q21.2 Tumor suppressor gene Transcription factor q22.2 Seq+ 97417 ChimerSeq TCGA FAWG TCGA_RNA-Seq JMJD7-RTF1 JMJD7 chr15 41828188 + RTF1 chr15 41452901 + Exonic hg38 OV TCGA-25-1320-01A 16 14 Out-of-frame Intra-chr q15.1 q15.1 Seq+ 97418 ChimerSeq TCGA FAWG TCGA_RNA-Seq C16orf70-MDFI C16orf70 chr16 67134467 + MDFI chr6 41649619 + Exonic hg38 OV TCGA-25-1320-01A 15 5 In-Frame Inter-chr q22.1 p21.1 Seq+ 97419 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF525-VAV1 ZNF525 chr19 53365759 + VAV1 chr19 6821791 + Exonic hg38 OV TCGA-25-1320-01A 16 0 5'UTR-CDS Intra-chr q13.42 Transcription factor p13.3 Seq+ 97420 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-AS2 ERBB2 chr17 39717480 + AS2 chr7 79012084 + Exonic hg38 OV TCGA-25-1320-01A 13 11 Out-of-frame Inter-chr q12 Oncogene 97421 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC23A2-TEAD4 SLC23A2 chr20 4867770 - TEAD4 chr12 3037968 + Exonic hg38 OV TCGA-25-1320-01A 13 2 In-Frame Inter-chr p13 p13.33 Transcription factor Seq+ 97422 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6R3-APTR PPP6R3 chr11 68558679 + APTR chr7 77661333 - Exonic hg38 OV TCGA-25-1320-01A 5 6 CDS-3'UTR Inter-chr q13.2 q11.23 97423 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTF2-BRDT MTF2 chr1 93079531 + BRDT chr1 91962718 + Exonic hg38 OV TCGA-25-1320-01A 3 0 5'UTR-5'UTR Intra-chr p22.1 Transcription factor p22.1 Atypical:BRD Seq+ 97424 ChimerSeq TCGA FAWG TCGA_RNA-Seq ULK1-SFSWAP ULK1 chr12 131895824 + SFSWAP chr12 131778065 + Exonic hg38 OV TCGA-25-1320-01A 2 1 In-Frame Intra-chr q24.33 Other:ULK q24.33 Seq+ 97425 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-IKZF3 ERBB2 chr17 39717480 + IKZF3 chr17 39757965 - Exonic hg38 OV TCGA-25-1320-01A 1000 1000 CDS-3'UTR Intra-chr q12 Oncogene q21.1 Tumor suppressor gene Transcription factor Seq+ 97426 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTN4-SUPT5H ACTN4 chr19 38647907 + SUPT5H chr19 39453356 + Exonic hg38 OV TCGA-25-1321-01A 83 61 3'UTR-CDS Intra-chr q13.2 Seq+ 97427 ChimerSeq TCGA FAWG TCGA_RNA-Seq HKR1-ATP1A3 HKR1 chr19 37324265 + ATP1A3 chr19 41988562 - Exonic hg38 OV TCGA-25-1321-01A 34 17 Out-of-frame Intra-chr q13.12 Transcription factor q13.2 Seq+ 97428 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDIA5-DIRC2 PDIA5 chr3 123102796 + DIRC2 chr3 122856307 + Exonic hg38 OV TCGA-25-1322-01A 103 33 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 97429 ChimerSeq TCGA FAWG TCGA_RNA-Seq GHITM-NRG3 GHITM chr10 84142754 + NRG3 chr10 82951469 + Exonic hg38 OV TCGA-25-1322-01A 60 17 In-Frame Intra-chr q23.1 q23.1 Seq+ 97430 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOB1B-MUC7 MOB1B chr4 70902550 + MUC7 chr4 70472215 + Exonic hg38 OV TCGA-25-1322-01A 59 10 5'UTR-5'UTR Intra-chr q13.3 Tumor suppressor gene q13.3 Seq+ 97431 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLIN3-BRSK1 PLIN3 chr19 4867609 - BRSK1 chr19 55301512 + Exonic hg38 OV TCGA-25-1322-01A 19 1 5'UTR-CDS Intra-chr p13.3 q13.42 CAMK:CAMKL Tumor suppressor gene Seq+ 97432 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL22-P2RX6P KLHL22 chr22 20488985 - P2RX6P chr22 21035436 - Exonic hg38 OV TCGA-25-1322-01A 16 2 3'UTR-3'UTR Intra-chr q11.21 q11.21 Seq+ 97433 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH2NL-UBE2H NOTCH2NL chr1 146228709 - UBE2H chr7 129858941 - Exonic hg38 OV TCGA-25-1323-01A 58 3 Out-of-frame Inter-chr q21.1 q32.2 Seq+ 97434 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP6NL-RNF216 USP6NL chr10 11597631 - RNF216 chr7 5624125 - Exonic hg38 OV TCGA-25-1323-01A 29 12 Out-of-frame Inter-chr p14 p22.1 Seq+ 97435 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP3-SPP2 AGAP3 chr7 151128684 + SPP2 chr2 234069928 + Exonic hg38 OV TCGA-25-1323-01A 27 4 Out-of-frame Inter-chr q36.1 q37.1 Seq+ 97436 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL2L11-CCDC170 BCL2L11 chr2 111150147 + CCDC170 chr6 151573174 + Exonic hg38 OV TCGA-25-1323-01A 22 2 In-Frame Inter-chr q13 Tumor suppressor gene q25.1 Seq+ 97437 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFE2L1-SP2 NFE2L1 chr17 48057502 + SP2 chr17 47922962 + Exonic hg38 OV TCGA-25-1323-01A 18 4 In-Frame Intra-chr q21.32 Transcription factor q21.32 Transcription factor Seq+ 97438 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATAD2B-S100A8 GATAD2B chr1 153922733 - S100A8 chr1 153390557 - Exonic hg38 OV TCGA-25-1323-01A 12 13 5'UTR-5'UTR Intra-chr Transcription factor q21.3 Seq+ 97439 ChimerSeq TCGA FAWG TCGA_RNA-Seq OVOL2-DZANK1 OVOL2 chr20 18056657 - DZANK1 chr20 18390459 - Exonic hg38 OV TCGA-25-1323-01A 10 1 In-Frame Intra-chr p11.23 Transcription factor p11.23 Seq+ 97440 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFXN2-SUFU SFXN2 chr10 102714681 + SUFU chr10 102592582 + Exonic hg38 OV TCGA-25-1323-01A 8 6 5'UTR-CDS Intra-chr q24.32 q24.32 Oncogene Tumor suppressor gene Seq+ 97441 ChimerSeq TCGA FAWG TCGA_RNA-Seq KNSTRN-BUB1B KNSTRN chr15 40392023 + BUB1B chr15 40206184 + Exonic hg38 OV TCGA-25-1323-01A 7 5 In-Frame Intra-chr q15.1 Oncogene q15.1 Oncogene Seq+ 97442 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF786-ABCF2 ZNF786 chr7 149090623 - ABCF2 chr7 151216029 - Exonic hg38 OV TCGA-25-1323-01A 5 5 In-Frame Intra-chr q36.1 Transcription factor q36.1 Seq+ 97443 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP8A1-CRMP1 ATP8A1 chr4 42624536 - CRMP1 chr4 5843161 - Exonic hg38 OV TCGA-25-1324-01A 122 29 In-Frame Intra-chr p13 p16.2 Seq+ 97444 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVR-HPN PVR chr19 44658765 + HPN chr19 35065250 + Exonic hg38 OV TCGA-25-1324-01A 21 39 In-Frame Intra-chr q13.31 q13.11 Seq+ 97445 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRABD2B-OLFM3 TRABD2B chr1 47994034 - OLFM3 chr1 101837025 - Exonic hg38 OV TCGA-25-1324-01A 25 3 In-Frame Intra-chr p33 p21.1 Seq+ 97446 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX30-NT5DC2 DHX30 chr3 47829134 + NT5DC2 chr3 52528311 - Exonic hg38 OV TCGA-25-1326-01A 227 125 In-Frame Intra-chr p21.31 p21.1 Seq+ 97447 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEO1-CNRIP1 NEO1 chr15 73136027 + CNRIP1 chr2 68294026 - Exonic hg38 OV TCGA-25-1326-01A 111 56 Out-of-frame Inter-chr q24.1 p14 Seq+ 97448 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB8A-TPM4 RAB8A chr19 16129604 + TPM4 chr19 16101264 + Exonic hg38 OV TCGA-25-1326-01A 46 16 Out-of-frame Intra-chr p13.11 p13.12 Seq+ 97449 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC44A1-NIPSNAP3A SLC44A1 chr9 105244904 + NIPSNAP3A chr9 104750956 + Exonic hg38 OV TCGA-25-1326-01A 6 5 In-Frame Intra-chr q31.1 q31.1 Seq+ 97450 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTBP1-FGF22 PTBP1 chr19 808762 + FGF22 chr19 643235 + Exonic hg38 OV TCGA-25-1326-01A 5 8 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 97451 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCRN2-SP6 SCRN2 chr17 47840670 - SP6 chr17 47848486 - Exonic hg38 OV TCGA-25-1326-01A 6 3 CDS-5'UTR Intra-chr q21.32 q21.32 Transcription factor Seq+ 97452 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLG1-PAK2 DLG1 chr3 197282679 - PAK2 chr3 196807782 + Exonic hg38 OV TCGA-25-1328-01A 17 8 In-Frame Intra-chr q29 Tumor suppressor gene q29 STE:STE20 Seq+ 97453 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK2-DLG1 PAK2 chr3 196805383 + DLG1 chr3 197149796 - Exonic hg38 OV TCGA-25-1328-01A 7 8 In-Frame Intra-chr q29 STE:STE20 q29 Tumor suppressor gene Seq+ 97454 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCM5-LYN MCM5 chr22 35403542 + LYN chr8 55998346 + Exonic hg38 OV TCGA-25-1329-01A 69 19 In-Frame Inter-chr q12.3 q12.1 TK:Src Seq+ 97455 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTLC3-PLPP1 SPTLC3 chr20 13110217 + PLPP1 chr5 55441908 - Exonic hg38 OV TCGA-25-1329-01A 38 13 In-Frame Inter-chr p12.1 q11.2 97456 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITPR2-MRPS35 ITPR2 chr12 26621123 - MRPS35 chr12 27735447 + Exonic hg38 OV TCGA-25-1329-01A 36 8 In-Frame Intra-chr p11.23 p11.22 Seq+ 97457 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARRDC2-KCNN1 ARRDC2 chr19 18001573 + KCNN1 chr19 17973808 + Exonic hg38 OV TCGA-25-1329-01A 25 5 CDS-5'UTR Intra-chr p13.11 p13.11 Seq+ 97458 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBX5-GTSF1 CBX5 chr12 54252041 - GTSF1 chr12 54471277 - Exonic hg38 OV TCGA-25-1329-01A 13 17 CDS-5'UTR Intra-chr q13.13 Tumor suppressor gene q13.13 Seq+ 97459 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNN1-SLC27A1 KCNN1 chr19 17989818 + SLC27A1 chr19 17483882 + Exonic hg38 OV TCGA-25-1329-01A 8 8 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 97460 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS15-TTC39A EPS15 chr1 51446960 - TTC39A chr1 51321825 - Exonic hg38 OV TCGA-25-1623-01A 130 61 In-Frame Intra-chr p32.3 p32.3 Seq+ 97461 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNASE2-MAST1 DNASE2 chr19 12880802 - MAST1 chr19 12873609 + Exonic hg38 OV TCGA-25-1623-01A 31 12 In-Frame Intra-chr p13.13 p13.13 AGC:MAST Seq+ 97462 ChimerSeq TCGA FAWG TCGA_RNA-Seq KRI1-DNM2 KRI1 chr19 10561667 - DNM2 chr19 10805916 + Exonic hg38 OV TCGA-25-1626-01A 31 17 In-Frame Intra-chr p13.2 p13.2 Seq+ 97463 ChimerSeq TCGA FAWG TCGA_RNA-Seq IDH2-ZNF710 IDH2 chr15 90102276 - ZNF710 chr15 90067110 + Exonic hg38 OV TCGA-25-1626-01A 13 0 5'UTR-5'UTR Intra-chr q26.1 Oncogene q26.1 Transcription factor Seq+ 97464 ChimerSeq TCGA FAWG TCGA_RNA-Seq SF3B2-TRMT112 SF3B2 chr11 66052517 + TRMT112 chr11 64317672 - Exonic hg38 OV TCGA-25-1627-01A 298 9 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 97465 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC18-RADIL TNRC18 chr7 5351819 - RADIL chr7 4836605 - Exonic hg38 OV TCGA-25-1627-01A 105 5 In-Frame Intra-chr p22.1 p22.1 Seq+ 97466 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM135-KCTD21 TMEM135 chr11 87091395 + KCTD21 chr11 78174583 - Exonic hg38 OV TCGA-25-1627-01A 51 8 CDS-5'UTR Intra-chr q14.2 q14.1 97467 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLPB-MRPL21 CLPB chr11 72301803 - MRPL21 chr11 68898012 - Exonic hg38 OV TCGA-25-1627-01A 24 4 Out-of-frame Intra-chr q13.4 q13.3 Seq+ 97468 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDC4-TP53TG5 SDC4 chr20 45348325 - TP53TG5 chr20 45377613 - Exonic hg38 OV TCGA-25-1627-01A 23 3 In-Frame Intra-chr q13.12 q13.12 Seq+ 97469 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGKV1OR2-IGKJ3 IGKV1OR2 chr2 113406869 + IGKJ3 chr2 88861258 - Exonic hg38 OV TCGA-25-1627-01A 13 0 Out-of-frame Intra-chr p11.2 97470 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF17-CLPB ARHGEF17 chr11 73311830 + CLPB chr11 72317220 - Exonic hg38 OV TCGA-25-1627-01A 11 0 In-Frame Intra-chr q13.4 q13.4 Seq+ 97471 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMPSTE24-RNF220 ZMPSTE24 chr1 40268535 + RNF220 chr1 44419304 + Exonic hg38 OV TCGA-25-1628-01A 77 31 CDS-5'UTR Intra-chr p34.2 p34.1 Seq+ 97472 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK7-ANGPTL3 DOCK7 chr1 62688227 - ANGPTL3 chr1 62597607 + Exonic hg38 OV TCGA-25-1630-01A 8 3 Out-of-frame Intra-chr p31.3 p31.3 97473 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCBP2-PFDN5 PCBP2 chr12 53462567 + PFDN5 chr12 53297850 + Exonic hg38 OV TCGA-25-1631-01A 161 41 In-Frame Intra-chr q13.13 q13.13 Seq+ 97474 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNRPA-GRIK5 SNRPA chr19 40750977 + GRIK5 chr19 42065820 - Exonic hg38 OV TCGA-25-1631-01A 37 16 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 97475 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN10-PRPF19 ATXN10 chr22 45740538 + PRPF19 chr11 60901540 - Exonic hg38 OV TCGA-25-1631-01A 14 1 In-Frame Inter-chr q13.31 q12.2 Seq+ 97476 ChimerSeq TCGA FAWG TCGA_RNA-Seq CC2D1A-ZSWIM4 CC2D1A chr19 13930585 + ZSWIM4 chr19 13823346 + Exonic hg38 OV TCGA-25-1631-01A 12 5 3'UTR-CDS Intra-chr p13.12 Transcription factor p13.13 Seq+ 97477 ChimerSeq TCGA FAWG TCGA_RNA-Seq FLOT2-PHF12 FLOT2 chr17 28897526 - PHF12 chr17 28908881 - Exonic hg38 OV TCGA-25-1631-01A 11 2 In-Frame Intra-chr q11.2 q11.2 Seq+ 97478 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R2A-ZDHHC2 PPP2R2A chr8 26293740 + ZDHHC2 chr8 17217172 + Exonic hg38 OV TCGA-25-1632-01A 178 84 In-Frame Intra-chr p21.2 p22 Tumor suppressor gene Seq+ 97479 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPAS3-RB1 NPAS3 chr14 32935003 + RB1 chr13 48464998 + Exonic hg38 OV TCGA-25-1632-01A 83 55 5'UTR-CDS Inter-chr q13.1 Transcription factor q14.2 Oncogene Tumor suppressor gene Seq+ 97480 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKFY1-SPINT2 ANKFY1 chr17 4173909 - SPINT2 chr19 38283627 + Exonic hg38 OV TCGA-25-1632-01A 19 12 In-Frame Inter-chr p13.2 q13.2 Tumor suppressor gene Seq+ 97481 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCI-SAMD7 PRKCI chr3 170222770 + SAMD7 chr3 169911733 + Exonic hg38 OV TCGA-25-1632-01A 14 6 CDS-5'UTR Intra-chr q26.2 q26.2 Seq+ 97482 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF7-PPIE ZNF7 chr8 144837507 + PPIE chr1 39740165 + Exonic hg38 OV TCGA-25-1633-01A 26 7 In-Frame Inter-chr q24.3 Transcription factor p34.2 Seq+ 97483 ChimerSeq TCGA FAWG TCGA_RNA-Seq VTCN1-AGBL4 VTCN1 chr1 117210824 - AGBL4 chr1 49697437 - Exonic hg38 OV TCGA-25-1633-01A 16 15 Out-of-frame Intra-chr p12 p33 Seq+ 97484 ChimerSeq TCGA FAWG TCGA_RNA-Seq INPP5B-TRIT1 INPP5B chr1 37885638 - TRIT1 chr1 39847660 - Exonic hg38 OV TCGA-25-1633-01A 11 4 In-Frame Intra-chr p34.3 p34.2 Tumor suppressor gene Seq+ 97485 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACF1-FAM129A MACF1 chr1 39105717 + FAM129A chr1 184899309 - Exonic hg38 OV TCGA-25-1633-01A 6 3 Out-of-frame Intra-chr p34.3 q25.3 97486 ChimerSeq TCGA FAWG TCGA_RNA-Seq AIM1-BEND3 AIM1 chr6 106361081 + BEND3 chr6 107099296 - Exonic hg38 OV TCGA-25-1634-01A 17 1 Out-of-frame Intra-chr q21 97487 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKT2-CXCL11 AKT2 chr19 40285181 - CXCL11 chr4 76036064 - Exonic hg38 OV TCGA-25-1635-01A 23 7 5'UTR-5'UTR Inter-chr q13.2 AGC:Akt Oncogene q21.1 Seq+ 97488 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARD3-CAMK1D PARD3 chr10 34450317 - CAMK1D chr10 12666736 + Exonic hg38 OV TCGA-25-1635-01A 22 6 Out-of-frame Intra-chr p11.21 p13 Seq+ 97489 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD22-CADPS CD22 chr19 35329230 + CADPS chr3 62765984 - Exonic hg38 OV TCGA-25-1870-01A 77 35 5'UTR-CDS Inter-chr q13.12 p14.2 Seq+ 97490 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOX5-FFAR2 SOX5 chr12 23665444 - FFAR2 chr19 35449714 + Exonic hg38 OV TCGA-25-1870-01A 61 22 CDS-5'UTR Inter-chr p12.1 Transcription factor q13.12 Seq+ 97491 ChimerSeq TCGA FAWG TCGA_RNA-Seq GIPC1-UBL3 GIPC1 chr19 14491656 - UBL3 chr13 29777263 - Exonic hg38 OV TCGA-25-1870-01A 62 6 5'UTR-CDS Inter-chr p13.12 q12.3 Seq+ 97492 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRACR2A-SOX5 CRACR2A chr12 3713237 - SOX5 chr12 23665564 - Exonic hg38 OV TCGA-25-1870-01A 57 22 5'UTR-CDS Intra-chr p13.32 p12.1 Transcription factor 97493 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCC9-DMKN ABCC9 chr12 21875654 - DMKN chr19 35505986 - Exonic hg38 OV TCGA-25-1870-01A 53 20 Out-of-frame Inter-chr p12.1 q13.12 Seq+ 97494 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELL-GRIN2B ELL chr19 18521921 - GRIN2B chr12 13866226 - Exonic hg38 OV TCGA-25-1870-01A 11 0 CDS-5'UTR Inter-chr p13.11 p13.1 Seq+ 97495 ChimerSeq TCGA FAWG TCGA_RNA-Seq LUC7L-STX8 LUC7L chr16 189229 - STX8 chr17 9557528 - Exonic hg38 OV TCGA-25-1871-01A 39 0 Out-of-frame Inter-chr p13.3 p13.1 97496 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOK4-PLLP DOK4 chr16 57479442 - PLLP chr16 57262070 - Exonic hg38 OV TCGA-25-1871-01A 37 2 In-Frame Intra-chr q21 q13 Seq+ 97497 ChimerSeq TCGA FAWG TCGA_RNA-Seq C19orf47-SCN1B C19orf47 chr19 40341839 - SCN1B chr19 35032528 + Exonic hg38 OV TCGA-25-1877-01A 30 6 In-Frame Intra-chr q13.2 q13.11 Seq+ 97498 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBA2-ZNF146 UBA2 chr19 34464131 + ZNF146 chr19 36235659 + Exonic hg38 OV TCGA-25-1877-01A 31 2 CDS-5'UTR Intra-chr q13.11 q13.12 Transcription factor Seq+ 97499 ChimerSeq TCGA FAWG TCGA_RNA-Seq FXYD5-HNRNPUL1 FXYD5 chr19 35157501 + HNRNPUL1 chr19 41268223 + Exonic hg38 OV TCGA-25-1877-01A 29 3 In-Frame Intra-chr q13.12 q13.2 Seq+ 97500 ChimerSeq TCGA FAWG TCGA_RNA-Seq AXL-ZNF565 AXL chr19 41256611 + ZNF565 chr19 36195156 - Exonic hg38 OV TCGA-25-1877-01A 20 5 In-Frame Intra-chr q13.2 TK:Axl Oncogene q13.12 Transcription factor Seq+ 97501 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPUL1-IFNL4 HNRNPUL1 chr19 41262582 + IFNL4 chr19 39248587 - Exonic hg38 OV TCGA-25-1877-01A 11 0 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 97502 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLIM4-SPATA16 GOLIM4 chr3 168095099 - SPATA16 chr3 173117749 - Exonic hg38 OV TCGA-25-1877-01A 10 0 CDS-5'UTR Intra-chr q26.2 q26.31 Seq+ 97503 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF622-FAM134B ZNF622 chr5 16463108 - FAM134B chr5 16477788 - Exonic hg38 OV TCGA-25-2042-01A 6 4 Out-of-frame Intra-chr p15.1 Seq+ 97504 ChimerSeq TCGA FAWG TCGA_RNA-Seq LYAR-CTBP1 LYAR chr4 4283621 - CTBP1 chr4 1228343 - Exonic hg38 OV TCGA-25-2391-01A 63 2 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 97505 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP35-KCNH7 NUP35 chr2 183151649 + KCNH7 chr2 162435597 - Exonic hg38 OV TCGA-25-2392-01A 32 1 Out-of-frame Intra-chr q32.1 q24.2 Seq+ 97506 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO3B-TSHZ2 MYO3B chr2 170236136 + TSHZ2 chr20 53487144 + Exonic hg38 OV TCGA-25-2392-01A 31 4 CDS-3'UTR Inter-chr q31.1 STE:STE20 q13.2 Transcription factor Seq+ 97507 ChimerSeq TCGA FAWG TCGA_RNA-Seq KTN1-LGALS3 KTN1 chr14 55580354 + LGALS3 chr14 55137370 + Exonic hg38 OV TCGA-25-2392-01A 24 9 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 97508 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEF1D-PUF60 EEF1D chr8 143597348 - PUF60 chr8 143821913 - Exonic hg38 OV TCGA-25-2392-01A 13 1 5'UTR-5'UTR Intra-chr Seq+ 97509 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPECC1L-BCRP3 SPECC1L chr22 24276803 + BCRP3 chr22 24644740 + Exonic hg38 OV TCGA-25-2392-01A 12 2 5'UTR-5'UTR Intra-chr q11.23 q11.23 97510 ChimerSeq TCGA FAWG TCGA_RNA-Seq SS18-UBE2I SS18 chr18 26052624 - UBE2I chr16 1326832 + Exonic hg38 OV TCGA-25-2393-01A 477 89 CDS-3'UTR Inter-chr q11.2 p13.3 Seq+ 97511 ChimerSeq TCGA FAWG TCGA_RNA-Seq BEND7-PHYH BEND7 chr10 13526138 - PHYH chr10 13281110 - Exonic hg38 OV TCGA-25-2393-01A 131 14 Out-of-frame Intra-chr p13 p13 Seq+ 97512 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGA2-HNRNPM HMGA2 chr12 65828087 + HNRNPM chr19 8455405 + Exonic hg38 OV TCGA-25-2393-01A 14 0 Out-of-frame Inter-chr q14.3 Transcription factor p13.2 Seq+ 97513 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNB1-NADK GNB1 chr1 1890820 - NADK chr1 1765446 - Exonic hg38 OV TCGA-25-2396-01A 31 1 5'UTR-5'UTR Intra-chr p36.33 p36.33 Seq+ 97514 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRD4-CYP4F22 BRD4 chr19 15332290 - CYP4F22 chr19 15523693 + Exonic hg38 OV TCGA-25-2396-01A 19 3 5'UTR-5'UTR Intra-chr p13.12 Atypical:BRD p13.12 Seq+ 97515 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAP2-CAP1 SMAP2 chr1 40374223 + CAP1 chr1 40059337 + Exonic hg38 OV TCGA-25-2396-01A 10 1 CDS-5'UTR Intra-chr p34.2 p34.2 Seq+ 97516 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHNAK-MACROD1 AHNAK chr11 62518965 - MACROD1 chr11 64000295 - Exonic hg38 OV TCGA-25-2397-01A 263 65 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q13.1 Seq+ 97517 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRC2B-NUP155 PRRC2B chr9 131394263 + NUP155 chr5 37292985 - Exonic hg38 OV TCGA-25-2397-01A 249 38 5'UTR-CDS Inter-chr q34.13 p13.2 Seq+ 97518 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXNB1-COL7A1 PLXNB1 chr3 48413197 - COL7A1 chr3 48587932 - Exonic hg38 OV TCGA-25-2397-01A 54 30 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 97519 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1CB-SSPN PPP1CB chr2 28779039 + SSPN chr12 26179996 + Exonic hg38 OV TCGA-25-2397-01A 30 17 CDS-5'UTR Inter-chr p23.2 p12.1 Seq+ 97520 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRC1-VPS33B PRC1 chr15 90984693 - VPS33B chr15 91017885 - Exonic hg38 OV TCGA-25-2397-01A 17 5 In-Frame Intra-chr q26.1 q26.1 Seq+ 97521 ChimerSeq TCGA FAWG TCGA_RNA-Seq STRN4-2 STRN4 chr19 46738785 - 2 chr19 53048867 + Exonic hg38 OV TCGA-25-2398-01A 47 25 Out-of-frame Intra-chr q13.32 97522 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYH9-EMID1 MYH9 chr22 36348904 - EMID1 chr22 29214926 + Exonic hg38 OV TCGA-25-2398-01A 47 5 Out-of-frame Intra-chr q12.3 Oncogene Tumor suppressor gene q12.2 Seq+ 97523 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC22A3-PVT1 SLC22A3 chr6 160348848 + PVT1 chr8 128096518 + Exonic hg38 OV TCGA-25-2398-01A 23 5 CDS-5'UTR Inter-chr q25.3 q24.21 Seq+ 97524 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCK5-INPP5B ADCK5 chr8 144379490 + INPP5B chr1 37862430 - Exonic hg38 OV TCGA-25-2398-01A 14 3 3'UTR-3'UTR Inter-chr q24.3 Atypical:ABC1 p34.3 Seq+ 97525 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF529-CLEC11A ZNF529 chr19 36589615 - CLEC11A chr19 50723905 + Exonic hg38 OV TCGA-25-2398-01A 6 1 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.33 Seq+ 97526 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM2-PRKCSH DNM2 chr19 10718403 + PRKCSH chr19 11436041 + Exonic hg38 OV TCGA-25-2399-01A 112 16 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 97527 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF826P-NUMBL ZNF826P chr19 20408950 - NUMBL chr19 40677421 - Exonic hg38 OV TCGA-25-2399-01A 73 10 3'UTR-CDS Intra-chr p12 q13.2 Seq+ 97528 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF18-INSR ARHGEF18 chr19 7395247 + INSR chr19 7267896 - Exonic hg38 OV TCGA-25-2399-01A 23 4 5'UTR-CDS Intra-chr p13.2 p13.2 TK:InsR Seq+ 97529 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCMH1-TRAPPC3 SCMH1 chr1 41242059 - TRAPPC3 chr1 36140166 - Exonic hg38 OV TCGA-25-2400-01A 245 29 5'UTR-5'UTR Intra-chr p34.2 Transcription factor p34.3 Seq+ 97530 ChimerSeq TCGA FAWG TCGA_RNA-Seq NECAP2-EPHA2 NECAP2 chr1 16449201 + EPHA2 chr1 16130419 - Exonic hg38 OV TCGA-25-2400-01A 44 14 In-Frame Intra-chr p36.13 p36.13 Tumor suppressor gene Seq+ 97531 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP34-FAM178B USP34 chr2 61470650 - FAM178B chr2 96947902 - Exonic hg38 OV TCGA-25-2400-01A 43 6 Out-of-frame Intra-chr p15 q11.2 Seq+ 97532 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH6-SKP2 CDH6 chr5 31193886 + SKP2 chr5 36152771 + Exonic hg38 OV TCGA-25-2400-01A 31 4 5'UTR-5'UTR Intra-chr p13.3 p13.2 Tumor suppressor gene Seq+ 97533 ChimerSeq TCGA FAWG TCGA_RNA-Seq TULP4-SYTL3 TULP4 chr6 158232303 + SYTL3 chr6 158745480 + Exonic hg38 OV TCGA-25-2400-01A 22 12 5'UTR-CDS Intra-chr q25.3 q25.3 97534 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPF40B-AS2 PRPF40B chr12 49632880 + AS2 chr5 38401221 - Exonic hg38 OV TCGA-25-2400-01A 20 6 Out-of-frame Inter-chr q13.12 97535 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERGIC1-RANBP17 ERGIC1 chr5 172924109 + RANBP17 chr5 171161407 + Exonic hg38 OV TCGA-25-2400-01A 13 1 Out-of-frame Intra-chr q35.1 q35.1 Seq+ 97536 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCB1-AS2 PLCB1 chr20 8150371 + AS2 chr4 85004230 + Exonic hg38 OV TCGA-25-2400-01A 10 0 Out-of-frame Inter-chr p12.3 97537 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR1-TTLL1 FGFR1 chr8 38457356 - TTLL1 chr22 43039905 - Exonic hg38 OV TCGA-25-2401-01A 26 4 Out-of-frame Inter-chr p11.23 TK:FGFR Oncogene q13.2 97538 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP34-PLEKHG1 USP34 chr2 61420746 - PLEKHG1 chr6 150786390 + Exonic hg38 OV TCGA-25-2401-01A 15 4 In-Frame Inter-chr p15 q25.1 Seq+ 97539 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC149-C9orf3 CCDC149 chr4 24876536 - C9orf3 chr9 95060694 + Exonic hg38 OV TCGA-25-2401-01A 13 2 Out-of-frame Inter-chr p15.2 q22.32 Seq+ 97540 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGB3-MYL4 ITGB3 chr17 47253940 + MYL4 chr17 47209389 + Exonic hg38 OV TCGA-25-2401-01A 13 1 CDS-5'UTR Intra-chr q21.32 Oncogene Tumor suppressor gene q21.32 Seq+ 97541 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACADS-GTPBP10 ACADS chr12 120737135 + GTPBP10 chr7 90352816 + Exonic hg38 OV TCGA-25-2401-01A 10 1 In-Frame Inter-chr q24.31 q21.13 Seq+ 97542 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAT1-AKT2 BCAT1 chr12 24894275 - AKT2 chr19 40265351 - Exonic hg38 OV TCGA-25-2404-01A 17 2 CDS-5'UTR Inter-chr p12.1 q13.2 AGC:Akt Oncogene 97543 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPM3-GPR37L1 TPM3 chr1 154170400 - GPR37L1 chr1 202127741 + Exonic hg38 OV TCGA-25-2409-01A 86 35 Out-of-frame Intra-chr q21.3 q32.1 Seq+ 97544 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX42-ACE DDX42 chr17 63774376 + ACE chr17 63479769 + Exonic hg38 OV TCGA-25-2409-01A 12 4 5'UTR-CDS Intra-chr q23.3 q23.3 Seq+ 97545 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF3L-CDC42EP1 EIF3L chr22 37878171 + CDC42EP1 chr22 37566072 + Exonic hg38 OV TCGA-29-1688-01A 12 2 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 97546 ChimerSeq TCGA FAWG TCGA_RNA-Seq COA1-POLR2J4 COA1 chr7 43729429 - POLR2J4 chr7 43973323 - Exonic hg38 OV TCGA-29-1688-01A 10 1 3'UTR-3'UTR Intra-chr p13 p13 97547 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNAPC1-PRKCH SNAPC1 chr14 61778910 + PRKCH chr14 61391225 + Exonic hg38 OV TCGA-29-1688-01A 4 3 In-Frame Intra-chr q23.2 q23.1 97548 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD17-AK2 ANKRD17 chr4 73258274 - AK2 chr1 33014592 - Exonic hg38 OV TCGA-29-1691-01A 65 29 Out-of-frame Inter-chr q13.3 p35.1 Seq+ 97549 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK2-MEIS1 ROCK2 chr2 11343996 - MEIS1 chr2 66547943 + Exonic hg38 OV TCGA-29-1691-01A 28 6 In-Frame Intra-chr p25.1 AGC:DMPK p14 Transcription factor Seq+ 97550 ChimerSeq TCGA FAWG TCGA_RNA-Seq IPPK-IARS IPPK chr9 92634386 - IARS chr9 92210889 - Exonic hg38 OV TCGA-29-1691-01A 27 7 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 97551 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPAL2-EBAG9 NIPAL2 chr8 98294003 - EBAG9 chr8 109564439 + Exonic hg38 OV TCGA-29-1691-01A 24 6 Out-of-frame Intra-chr q22.2 q23.2 Seq+ 97552 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP133-PARPBP NUP133 chr1 229498136 - PARPBP chr12 102195951 + Exonic hg38 OV TCGA-29-1691-01A 22 3 Out-of-frame Inter-chr q42.13 q23.2 Seq+ 97553 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSP-FARS2 DSP chr6 7542085 + FARS2 chr6 5545180 + Exonic hg38 OV TCGA-29-1691-01A 17 7 Out-of-frame Intra-chr p24.3 Tumor suppressor gene p25.1 Seq+ 97554 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRK3-NBPF14 GRK3 chr22 25604453 + NBPF14 chr1 148640097 - Exonic hg38 OV TCGA-29-1691-01A 14 0 5'UTR-5'UTR Inter-chr q12.1 q21.2 97555 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDAH2-MSH5 DDAH2 chr6 31730051 - MSH5 chr6 31758165 + Exonic hg38 OV TCGA-29-1691-01A 8 3 5'UTR-3'UTR Intra-chr Seq+ 97556 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIL1-ECSCR SIL1 chr5 139121035 - ECSCR chr5 139454923 - Exonic hg38 OV TCGA-29-1693-01A 56 24 In-Frame Intra-chr q31.2 q31.2 97557 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNE4-THAP8 SYNE4 chr19 36006523 - THAP8 chr19 36039564 - Exonic hg38 OV TCGA-29-1693-01A 32 6 Out-of-frame Intra-chr q13.12 q13.12 Transcription factor Seq+ 97558 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUAK2-LEMD1 NUAK2 chr1 205311705 - LEMD1 chr1 205381856 - Exonic hg38 OV TCGA-29-1693-01A 2 0 In-Frame Intra-chr q32.1 q32.1 Seq+ 97559 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBN1-SRRM2 UBN1 chr16 4847339 + SRRM2 chr16 2769932 + Exonic hg38 OV TCGA-29-1694-01A 136 11 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 97560 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSP90AB1-CAPN11 HSP90AB1 chr6 44247195 + CAPN11 chr6 44166758 + Exonic hg38 OV TCGA-29-1694-01A 14 2 5'UTR-CDS Intra-chr p21.1 Oncogene p21.1 Seq+ 97561 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTK7-KLHDC3 PTK7 chr6 43076567 + KLHDC3 chr6 43017134 + Exonic hg38 OV TCGA-29-1694-01A 11 5 5'UTR-5'UTR Intra-chr p21.1 p21.1 Seq+ 97562 ChimerSeq TCGA FAWG TCGA_RNA-Seq SWI5-DNM1 SWI5 chr9 128286033 + DNM1 chr9 128218231 + Exonic hg38 OV TCGA-29-1694-01A 10 2 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 97563 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSF1-GSTM5 CSF1 chr1 109925202 + GSTM5 chr1 109775072 + Exonic hg38 OV TCGA-29-1695-01A 70 7 3'UTR-3'UTR Intra-chr p13.3 p13.3 Seq+ 97564 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRIG1-PPM1L LRIG1 chr3 66500190 - PPM1L chr3 160961736 + Exonic hg38 OV TCGA-29-1695-01A 14 4 5'UTR-5'UTR Intra-chr Tumor suppressor gene q25.33 Tumor suppressor gene Seq+ 97565 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPIA-OGDH PPIA chr7 44799874 + OGDH chr7 44693825 + Exonic hg38 OV TCGA-29-1697-01A 79 16 Out-of-frame Intra-chr p13 p13 Seq+ 97566 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIER2-RPL26 MIER2 chr19 325635 - RPL26 chr17 8382315 - Exonic hg38 OV TCGA-29-1697-01A 45 1 CDS-5'UTR Inter-chr p13.3 p13.1 Seq+ 97567 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBFB-CES4A CBFB chr16 67036755 + CES4A chr16 66995628 + Exonic hg38 OV TCGA-29-1697-01A 34 7 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 97568 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBX1-SKAP1 CBX1 chr17 48076865 - SKAP1 chr17 48137337 - Exonic hg38 OV TCGA-29-1697-01A 24 4 Out-of-frame Intra-chr q21.32 q21.32 Seq+ 97569 ChimerSeq TCGA FAWG TCGA_RNA-Seq MX2-FAM3B MX2 chr21 41380151 + FAM3B chr21 41344476 + Exonic hg38 OV TCGA-29-1697-01A 22 10 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 97570 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K12-ATF7 MAP3K12 chr12 53483101 - ATF7 chr12 53514201 - Exonic hg38 OV TCGA-29-1697-01A 16 5 Out-of-frame Intra-chr q13.13 q13.13 Transcription factor Seq+ 97571 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFX5-POGZ RFX5 chr1 151344197 - POGZ chr1 151442205 - Exonic hg38 OV TCGA-29-1697-01A 13 4 CDS-5'UTR Intra-chr q21.3 Transcription factor q21.3 Seq+ 97572 ChimerSeq TCGA FAWG TCGA_RNA-Seq MALAT1-DPF2 MALAT1 chr11 65503569 + DPF2 chr11 65345642 + Exonic hg38 OV TCGA-29-1697-01A 11 3 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 97573 ChimerSeq TCGA FAWG TCGA_RNA-Seq PYM1-SARNP PYM1 chr12 55927725 - SARNP chr12 55790592 - Exonic hg38 OV TCGA-29-1698-01A 36 5 In-Frame Intra-chr q13.2 q13.2 97574 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCDC2-GPLD1 DCDC2 chr6 24301715 - GPLD1 chr6 24429118 - Exonic hg38 OV TCGA-29-1698-01A 14 4 Out-of-frame Intra-chr p22.3 Tumor suppressor gene p22.3 Seq+ 97575 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPPK1-ZC3H3 EPPK1 chr8 143858063 - ZC3H3 chr8 143507899 - Exonic hg38 OV TCGA-29-1698-01A 13 6 CDS-5'UTR Intra-chr q24.3 Seq+ 97576 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF3C-RBKS KIF3C chr2 25980373 - RBKS chr2 27781788 - Exonic hg38 OV TCGA-29-1699-01A 87 29 In-Frame Intra-chr p23.3 p23.2 Seq+ 97577 ChimerSeq TCGA FAWG TCGA_RNA-Seq GYS1-HOMER3 GYS1 chr19 48991302 - HOMER3 chr19 18934410 - Exonic hg38 OV TCGA-29-1699-01A 63 25 In-Frame Intra-chr q13.33 p13.11 Seq+ 97578 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAZ2A-ATP5B BAZ2A chr12 56630776 - ATP5B chr12 56638423 - Exonic hg38 OV TCGA-29-1701-01A 29 1 Out-of-frame Intra-chr q13.3 Transcription factor q13.3 Seq+ 97579 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF850-COX6B1 ZNF850 chr19 36761643 - COX6B1 chr19 35658594 + Exonic hg38 OV TCGA-29-1701-01A 11 2 Out-of-frame Intra-chr q13.12 Transcription factor q13.12 Seq+ 97580 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF136-CALR ZNF136 chr19 12163206 + CALR chr19 12939134 + Exonic hg38 OV TCGA-29-1701-01A 8 3 Out-of-frame Intra-chr p13.2 Transcription factor p13.13 Seq+ 97581 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD3-MUCL1 NSD3 chr8 38381799 - MUCL1 chr12 54855116 + Exonic hg38 OV TCGA-29-1702-01A 169 75 5'UTR-CDS Inter-chr p11.23 Tumor suppressor gene q13.2 97582 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC17-ANO4 ZDHHC17 chr12 76764329 + ANO4 chr12 100901646 + Exonic hg38 OV TCGA-29-1702-01A 119 20 CDS-5'UTR Intra-chr q21.2 q23.1 Seq+ 97583 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAFAH1B1-SMYD4 PAFAH1B1 chr17 2594006 + SMYD4 chr17 1828006 - Exonic hg38 OV TCGA-29-1702-01A 82 21 5'UTR-5'UTR Intra-chr p13.3 Tumor suppressor gene p13.3 Tumor suppressor gene Seq+ 97584 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0319L-CASC18 KIAA0319L chr1 35554350 - CASC18 chr12 105737256 + Exonic hg38 OV TCGA-29-1702-01A 77 18 CDS-5'UTR Inter-chr p34.3 q23.3 97585 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHP1-SMAD3 CHP1 chr15 41262883 + SMAD3 chr15 67190413 + Exonic hg38 OV TCGA-29-1702-01A 67 5 Out-of-frame Intra-chr q15.1 q22.33 Transcription factor Seq+ 97586 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGO4-CASC18 AGO4 chr1 35826835 + CASC18 chr12 105737256 + Exonic hg38 OV TCGA-29-1702-01A 45 7 5'UTR-5'UTR Inter-chr p34.3 q23.3 97587 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPTC7-IGF1 PPTC7 chr12 110582809 - IGF1 chr12 102475799 - Exonic hg38 OV TCGA-29-1702-01A 44 8 Out-of-frame Intra-chr q24.11 q23.2 Tumor suppressor gene Seq+ 97588 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAU2-PAWR STAU2 chr8 73738284 - PAWR chr12 79621207 - Exonic hg38 OV TCGA-29-1702-01A 41 11 In-Frame Inter-chr q21.11 q21.2 Tumor suppressor gene Seq+ 97589 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAP1GAP2-TEKT1 RAP1GAP2 chr17 2800550 + TEKT1 chr17 6815962 - Exonic hg38 OV TCGA-29-1702-01A 30 4 In-Frame Intra-chr p13.3 p13.1 Seq+ 97590 ChimerSeq TCGA FAWG TCGA_RNA-Seq INO80-THSD4 INO80 chr15 41020900 - THSD4 chr15 71728549 + Exonic hg38 OV TCGA-29-1702-01A 28 8 In-Frame Intra-chr q15.1 q23 Seq+ 97591 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH2B3-FBXO21 SH2B3 chr12 111406277 + FBXO21 chr12 117146277 - Exonic hg38 OV TCGA-29-1702-01A 27 1 5'UTR-CDS Intra-chr q24.12 Tumor suppressor gene q24.22 Seq+ 97592 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS53-RTN4RL1 VPS53 chr17 601795 - RTN4RL1 chr17 1937808 - Exonic hg38 OV TCGA-29-1702-01A 18 3 5'UTR-CDS Intra-chr Tumor suppressor gene p13.3 Seq+ 97593 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCTP2-CPEB1 MCTP2 chr15 94370180 + CPEB1 chr15 82627367 - Exonic hg38 OV TCGA-29-1702-01A 15 4 CDS-5'UTR Intra-chr q26.2 q25.2 Transcription factor Seq+ 97594 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTBK2-EMC7 TTBK2 chr15 42920438 - EMC7 chr15 34096014 - Exonic hg38 OV TCGA-29-1702-01A 14 6 5'UTR-CDS Intra-chr q15.2 CK1:TTBK q14 Seq+ 97595 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRY1-SVOP CRY1 chr12 107092804 - SVOP chr12 108983761 - Exonic hg38 OV TCGA-29-1702-01A 12 3 In-Frame Intra-chr q23.3 q24.11 97596 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID4A-KIAA0586 ARID4A chr14 58298700 + KIAA0586 chr14 58540071 + Exonic hg38 OV TCGA-29-1703-01A 76 6 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 97597 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO19-SLC11A1 MYO19 chr17 36498266 - SLC11A1 chr2 218394925 + Exonic hg38 OV TCGA-29-1703-01A 21 6 5'UTR-CDS Inter-chr q12 q35 97598 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF626-RERG ZNF626 chr19 20645684 - RERG chr12 15337470 - Exonic hg38 OV TCGA-29-1703-01A 13 9 CDS-5'UTR Inter-chr p12 Transcription factor p12.3 Seq+ 97599 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAT1-VPS72 BCAT1 chr12 24878530 - VPS72 chr1 151178145 - Exonic hg38 OV TCGA-29-1703-01A 3 7 Out-of-frame Inter-chr p12.1 q21.3 Seq+ 97600 ChimerSeq TCGA FAWG TCGA_RNA-Seq LSM12-HDAC5 LSM12 chr17 44066504 - HDAC5 chr17 44084675 - Exonic hg38 OV TCGA-29-1707-02A 35 15 In-Frame Intra-chr q21.31 q21.31 Seq+ 97601 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMLG-AUTS2 CAMLG chr5 134738792 + AUTS2 chr7 70698569 + Exonic hg38 OV TCGA-29-1707-02A 18 6 Out-of-frame Inter-chr q31.1 q11.22 Seq+ 97602 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEX2-PDLIM3 TEX2 chr17 64263168 - PDLIM3 chr4 185525171 - Exonic hg38 OV TCGA-29-1707-02A 19 1 5'UTR-CDS Inter-chr q23.3 q35.1 97603 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFX1-CEACAMP3 RFX1 chr19 13972743 - CEACAMP3 chr19 41604841 + Exonic hg38 OV TCGA-29-1710-01A 51 9 Out-of-frame Intra-chr p13.12 Transcription factor Seq+ 97604 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFP28-SLC35E1 ZFP28 chr19 56539716 + SLC35E1 chr19 16568169 - Exonic hg38 OV TCGA-29-1710-01A 32 4 In-Frame Intra-chr q13.43 Transcription factor p13.11 Seq+ 97605 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2G1-PELP1 UBE2G1 chr17 4366271 - PELP1 chr17 4682952 - Exonic hg38 OV TCGA-29-1710-01A 13 4 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 97606 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL14-CCDC178 KLHL14 chr18 32741928 - CCDC178 chr18 32974681 - Exonic hg38 OV TCGA-29-1710-01A 13 2 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 97607 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSLN-MCRIP2 MSLN chr16 761174 + MCRIP2 chr16 647417 + Exonic hg38 OV TCGA-29-1711-01A 125 36 5'UTR-5'UTR Intra-chr p13.3 p13.3 97608 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSRP1-SLC6A13 NSRP1 chr17 30116863 + SLC6A13 chr12 238010 - Exonic hg38 OV TCGA-29-1711-01A 46 7 Out-of-frame Inter-chr q11.2 p13.33 Seq+ 97609 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUL5-ELMOD1 CUL5 chr11 108054955 + ELMOD1 chr11 107647468 + Exonic hg38 OV TCGA-29-1711-01A 19 4 In-Frame Intra-chr q22.3 Tumor suppressor gene q22.3 Seq+ 97610 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM79-SMG5 TMEM79 chr1 156285755 + SMG5 chr1 156249279 - Exonic hg38 OV TCGA-29-1711-01A 19 0 Out-of-frame Intra-chr q22 q22 Seq+ 97611 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPF6-DCAF5 PRPF6 chr20 63985025 + DCAF5 chr14 69062511 - Exonic hg38 OV TCGA-29-1711-01A 11 5 Out-of-frame Inter-chr q13.33 q24.1 Seq+ 97612 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC1-RINL TANC1 chr2 159097834 + RINL chr19 38871870 - Exonic hg38 OV TCGA-29-1711-01A 10 2 CDS-5'UTR Inter-chr q24.2 Seq+ 97613 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMG1-LRRK1 SMG1 chr16 18896052 - LRRK1 chr15 100988634 + Exonic hg38 OV TCGA-29-1711-01A 6 1 In-Frame Inter-chr p12.3 Atypical:PIKK q26.3 TKL:LRRK 97614 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPRIN2-TIMM23 GPRIN2 chr10 46554585 - TIMM23 chr10 45988737 + Exonic hg38 OV TCGA-29-1711-01A 5 2 5'UTR-5'UTR Intra-chr q11.22 q11.22 Seq+ 97615 ChimerSeq TCGA FAWG TCGA_RNA-Seq OTUD5-PCSK1N OTUD5 chrX 48934464 - PCSK1N chrX 48832341 - Exonic hg38 OV TCGA-29-1761-01A 44 0 In-Frame Intra-chr p11.23 p11.23 Seq+ 97616 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGPL1-COL13A1 SGPL1 chr10 70857690 + COL13A1 chr10 69895550 + Exonic hg38 OV TCGA-29-1761-01A 24 0 In-Frame Intra-chr q22.1 q22.1 Seq+ 97617 ChimerSeq TCGA FAWG TCGA_RNA-Seq LVCAT5-EPG5 LVCAT5 chr7 119782284 - EPG5 chr18 45952643 - Exonic hg38 OV TCGA-29-1761-01A 16 0 Out-of-frame Inter-chr q21.1 97618 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP1M2-TMED1 AP1M2 chr19 10587190 - TMED1 chr19 10833213 - Exonic hg38 OV TCGA-29-1761-01A 15 0 In-Frame Intra-chr p13.2 p13.2 Seq+ 97619 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTBN4-TDP1 SPTBN4 chr19 40534343 + TDP1 chr14 90019316 + Exonic hg38 OV TCGA-29-1762-01A 284 25 Out-of-frame Inter-chr q13.2 q32.11 Seq+ 97620 ChimerSeq TCGA FAWG TCGA_RNA-Seq PI4KB-SELENBP1 PI4KB chr1 151310211 - SELENBP1 chr1 151369769 - Exonic hg38 OV TCGA-29-1763-01A 3 0 Out-of-frame Intra-chr q21.3 q21.3 Tumor suppressor gene Seq+ 97621 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUPT5H-CATSPERG SUPT5H chr19 39445942 + CATSPERG chr19 38364943 + Exonic hg38 OV TCGA-29-1766-01A 26 0 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 97622 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBFA2T2-COMMD7 CBFA2T2 chr20 33490301 + COMMD7 chr20 32706760 - Exonic hg38 OV TCGA-29-1768-01A 13 3 In-Frame Intra-chr q11.21 q11.21 Seq+ 97623 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUDT7-IFT57 NUDT7 chr16 77725584 + IFT57 chr3 108167864 - Exonic hg38 OV TCGA-29-1769-01A 57 3 In-Frame Inter-chr q23.1 q13.13 Seq+ 97624 ChimerSeq TCGA FAWG TCGA_RNA-Seq LINC-SDK1 LINC chr7 131052425 - SDK1 chr7 4265124 + Exonic hg38 OV TCGA-29-1769-01A 35 11 Out-of-frame Intra-chr p22.2 97625 ChimerSeq TCGA FAWG TCGA_RNA-Seq VASP-PPM1N VASP chr19 45507776 + PPM1N chr19 45502017 + Exonic hg38 OV TCGA-29-1769-01A 18 3 Out-of-frame Intra-chr q13.32 q13.32 Seq+ 97626 ChimerSeq TCGA FAWG TCGA_RNA-Seq STX2-GRIN2B STX2 chr12 130839070 - GRIN2B chr12 13981576 - Exonic hg38 OV TCGA-29-1769-01A 15 2 5'UTR-5'UTR Intra-chr q24.33 p13.1 97627 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A32-SMYD3 SLC25A32 chr8 103407634 - SMYD3 chr1 246355094 - Exonic hg38 OV TCGA-29-1770-01A 15 7 In-Frame Inter-chr q22.3 q44 Transcription factor Seq+ 97628 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC8P1-NCAPH2 ZDHHC8P1 chr22 23400540 - NCAPH2 chr22 50520872 + Exonic hg38 OV TCGA-29-1774-01A 20 13 Out-of-frame Intra-chr q11.23 q13.33 97629 ChimerSeq TCGA FAWG TCGA_RNA-Seq NT5C-HN1 NT5C chr17 75131181 - HN1 chr17 75136250 - Exonic hg38 OV TCGA-29-1776-01A 8 3 Out-of-frame Intra-chr q25.1 Seq+ 97630 ChimerSeq TCGA FAWG TCGA_RNA-Seq CC2D1A-HCRT CC2D1A chr19 13906501 + HCRT chr17 42184528 - Exonic hg38 OV TCGA-29-1777-01A 72 2 In-Frame Inter-chr p13.12 Transcription factor q21.2 Seq+ 97631 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDH2-ATXN2 ALDH2 chr12 111767096 + ATXN2 chr12 111470742 - Exonic hg38 OV TCGA-29-1777-01A 8 0 Out-of-frame Intra-chr q24.12 q24.12 Seq+ 97632 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPG5-RAB38 EPG5 chr18 45887751 - RAB38 chr11 88114140 - Exonic hg38 OV TCGA-29-1778-01A 28 4 In-Frame Inter-chr q21.1 q14.2 Seq+ 97633 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP6NL-AHCY USP6NL chr10 11597631 - AHCY chr20 34295585 - Exonic hg38 OV TCGA-29-1778-01A 23 3 In-Frame Inter-chr p14 q11.22 Seq+ 97634 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTPBP2-VEGFA GTPBP2 chr6 43624510 - VEGFA chr6 43784541 + Exonic hg38 OV TCGA-29-1778-01A 22 1 In-Frame Intra-chr p21.1 p21.1 Tumor suppressor gene Seq+ 97635 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB20-RERE ZBTB20 chr3 114900304 - RERE chr1 8614686 - Exonic hg38 OV TCGA-29-1778-01A 16 3 5'UTR-CDS Inter-chr q13.31 Transcription factor p36.23 Seq+ 97636 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM165-DACH1 TMEM165 chr4 55424643 + DACH1 chr13 71489148 - Exonic hg38 OV TCGA-29-1778-01A 16 0 In-Frame Inter-chr q12 q21.33 Tumor suppressor gene Transcription factor Seq+ 97637 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAP1-NARS2 CAP1 chr1 40060170 + NARS2 chr11 78443758 - Exonic hg38 OV TCGA-29-1778-01A 11 0 In-Frame Inter-chr p34.2 q14.1 Seq+ 97638 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACF1-LSAMP MACF1 chr1 39382152 + LSAMP chr3 116444955 - Exonic hg38 OV TCGA-29-1778-01A 11 0 In-Frame Inter-chr p34.3 q13.31 Tumor suppressor gene Seq+ 97639 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOK5-SLC2A1 DOK5 chr20 54476012 + SLC2A1 chr1 42943321 - Exonic hg38 OV TCGA-29-1781-01A 41 1 In-Frame Inter-chr q13.2 p34.2 Seq+ 97640 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBA3-LMOD3 UBA3 chr3 69071535 - LMOD3 chr3 69109121 - Exonic hg38 OV TCGA-29-1781-01A 33 3 Out-of-frame Intra-chr p14.1 p14.1 Seq+ 97641 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPD52L1-NKAIN2 TPD52L1 chr6 125220193 + NKAIN2 chr6 124791339 + Exonic hg38 OV TCGA-29-1781-01A 27 2 In-Frame Intra-chr q22.31 q22.31 Seq+ 97642 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEX2-POLG2 TEX2 chr17 64212574 - POLG2 chr17 64485868 - Exonic hg38 OV TCGA-29-1781-01A 22 1 In-Frame Intra-chr q23.3 q23.3 Seq+ 97643 ChimerSeq TCGA FAWG TCGA_RNA-Seq MECOM-LRRC31 MECOM chr3 169663336 - LRRC31 chr3 169869872 - Exonic hg38 OV TCGA-29-1781-01A 16 0 5'UTR-5'UTR Intra-chr q26.2 Transcription factor q26.2 Seq+ 97644 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM4-PLEKHA4 R3HDM4 chr19 913087 - PLEKHA4 chr19 48841310 - Exonic hg38 OV TCGA-29-1783-01A 97 103 Out-of-frame Intra-chr p13.3 q13.33 Seq+ 97645 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADNP-KCNG1 ADNP chr20 50930826 - KCNG1 chr20 51012416 - Exonic hg38 OV TCGA-29-1783-01A 52 38 5'UTR-5'UTR Intra-chr q13.13 Transcription factor q13.13 Seq+ 97646 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSD17B14-SAFB HSD17B14 chr19 48834276 - SAFB chr19 5661558 + Exonic hg38 OV TCGA-29-1783-01A 17 4 Out-of-frame Intra-chr q13.33 p13.3 Tumor suppressor gene Transcription factor Seq+ 97647 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBXN6-GRM4 UBXN6 chr19 4452364 - GRM4 chr6 34040748 - Exonic hg38 OV TCGA-29-1783-01A 9 4 Out-of-frame Inter-chr p13.3 p21.31 Seq+ 97648 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMYD2-KCNK2 SMYD2 chr1 214281427 + KCNK2 chr1 215086368 + Exonic hg38 OV TCGA-29-1783-01A 7 7 Out-of-frame Intra-chr q32.3 q41 Seq+ 97649 ChimerSeq TCGA FAWG TCGA_RNA-Seq FLOT2-SUPT6H FLOT2 chr17 28897526 - SUPT6H chr17 28686339 + Exonic hg38 OV TCGA-29-1784-01A 37 4 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 97650 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD1-NCKIPSD NSD1 chr5 177136030 + NCKIPSD chr3 48680229 - Exonic hg38 OV TCGA-29-1784-01A 11 2 In-Frame Inter-chr q35.3 Oncogene p21.31 97651 ChimerSeq TCGA FAWG TCGA_RNA-Seq VTCN1-PTGFRN VTCN1 chr1 117210824 - PTGFRN chr1 116941715 + Exonic hg38 OV TCGA-29-1785-01A 105 24 Out-of-frame Intra-chr p12 p13.1 Seq+ 97652 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPG20-SOHLH2 SPG20 chr13 36346225 - SOHLH2 chr13 36202093 - Exonic hg38 OV TCGA-29-1785-01A 39 14 Out-of-frame Intra-chr q13.3 q13.3 Transcription factor Seq+ 97653 ChimerSeq TCGA FAWG TCGA_RNA-Seq TULP3-ITFG2 TULP3 chr12 2877282 + ITFG2 chr12 2822794 + Exonic hg38 OV TCGA-29-1785-01A 27 3 5'UTR-5'UTR Intra-chr p13.33 p13.33 Seq+ 97654 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFTUD2-PLCD3 EFTUD2 chr17 44852409 - PLCD3 chr17 45120414 - Exonic hg38 OV TCGA-29-1785-01A 23 7 Out-of-frame Intra-chr q21.31 q21.31 97655 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L1-DEFB123 EPB41L1 chr20 36222394 + DEFB123 chr20 31450029 + Exonic hg38 OV TCGA-29-1785-01A 10 2 Out-of-frame Intra-chr q11.23 q11.21 Seq+ 97656 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMP7-DYNC2LI1 BMP7 chr20 57202475 - DYNC2LI1 chr2 43804642 + Exonic hg38 OV TCGA-29-2414-01A 21 4 In-Frame Inter-chr q13.31 p21 Seq+ 97657 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLK1-PRPF40A TLK1 chr2 171061081 - PRPF40A chr2 152681336 - Exonic hg38 OV TCGA-29-2425-01A 20 1 Out-of-frame Intra-chr q31.1 Other:TLK q23.3 Seq+ 97658 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF277-TERB2 ZNF277 chr7 112296311 + TERB2 chr15 44973867 + Exonic hg38 OV TCGA-29-2425-01A 18 1 Out-of-frame Inter-chr q31.1 Transcription factor q21.1 97659 ChimerSeq TCGA FAWG TCGA_RNA-Seq GID4-DRC3 GID4 chr17 18039902 + DRC3 chr17 18004363 + Exonic hg38 OV TCGA-29-2425-01A 8 4 In-Frame Intra-chr p11.2 p11.2 97660 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBX1-FMO7P PBX1 chr1 164563311 + FMO7P chr1 166476136 + Exonic hg38 OV TCGA-29-2425-01A 7 2 Out-of-frame Intra-chr q23.3 Oncogene Transcription factor q24.1 97661 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCMTD1-KLHDC8A PCMTD1 chr8 51898930 - KLHDC8A chr1 205343793 - Exonic hg38 OV TCGA-29-2427-01A 51 14 5'UTR-5'UTR Inter-chr q11.23 q32.1 Seq+ 97662 ChimerSeq TCGA FAWG TCGA_RNA-Seq COASY-HSD17B1 COASY chr17 42562288 + HSD17B1 chr17 42552883 + Exonic hg38 OV TCGA-29-2427-01A 12 0 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 97663 ChimerSeq TCGA FAWG TCGA_RNA-Seq MUC16-RARA MUC16 chr19 8934888 - RARA chr17 40330857 + Exonic hg38 OV TCGA-29-2428-01A 6 2 CDS-5'UTR Inter-chr p13.2 q21.2 Oncogene Transcription factor Seq+ 97664 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHACTR4-LRRC42 PHACTR4 chr1 28407463 + LRRC42 chr1 53960356 + Exonic hg38 OV TCGA-29-A5NZ-01A 54 25 Out-of-frame Intra-chr p35.3 Tumor suppressor gene p32.3 Seq+ 97665 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF5-RAD51B DCAF5 chr14 69091674 - RAD51B chr14 68468172 + Exonic hg38 OV TCGA-29-A5NZ-01A 52 12 In-Frame Intra-chr q24.1 q24.1 KB Seq+ 97666 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRAS1-MGST2 FRAS1 chr4 78400887 + MGST2 chr4 139695197 + Exonic hg38 OV TCGA-29-A5NZ-01A 49 15 Out-of-frame Intra-chr q21.21 q31.1 Seq+ 97667 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLN3-SIVA1 CLN3 chr16 28486347 - SIVA1 chr14 104759219 + Exonic hg38 OV TCGA-29-A5NZ-01A 22 13 Out-of-frame Inter-chr p12.1 q32.33 Seq+ 97668 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3C2B-C1orf116 PIK3C2B chr1 204464012 - C1orf116 chr1 207027679 - Exonic hg38 OV TCGA-29-A5NZ-01A 25 1 CDS-5'UTR Intra-chr q32.1 Oncogene q32.1 Seq+ 97669 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPF-ZNF33B HNRNPF chr10 43396456 - ZNF33B chr10 42632439 - Exonic hg38 OV TCGA-29-A5NZ-01A 19 8 5'UTR-5'UTR Intra-chr q11.21 q11.21 Transcription factor Seq+ 97670 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELMSAN1-VSX2 ELMSAN1 chr14 73787102 - VSX2 chr14 74241182 + Exonic hg38 OV TCGA-29-A5NZ-01A 16 7 5'UTR-CDS Intra-chr q24.3 q24.3 Transcription factor Seq+ 97671 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPECC1L-XPNPEP3 SPECC1L chr22 24313466 + XPNPEP3 chr22 40922333 + Exonic hg38 OV TCGA-29-A5NZ-01A 15 8 Out-of-frame Intra-chr q11.23 q13.2 Seq+ 97672 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIVA1-PTBP1P SIVA1 chr14 104753319 + PTBP1P chr14 65279347 + Exonic hg38 OV TCGA-29-A5NZ-01A 15 7 Out-of-frame Intra-chr q32.33 q23.3 Seq+ 97673 ChimerSeq TCGA FAWG TCGA_RNA-Seq JDP2-PLEKHH1 JDP2 chr14 75438121 + PLEKHH1 chr14 67541834 + Exonic hg38 OV TCGA-29-A5NZ-01A 14 5 CDS-5'UTR Intra-chr q24.3 Tumor suppressor gene Transcription factor q24.1 Seq+ 97674 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF4-IFT140 DCAF4 chr14 72938066 + IFT140 chr16 1526800 - Exonic hg38 OV TCGA-29-A5NZ-01A 11 4 Out-of-frame Inter-chr q24.2 p13.3 Seq+ 97675 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOCS1-LEMD3 MOCS1 chr6 39925678 - LEMD3 chr12 65238502 + Exonic hg38 OV TCGA-29-A5NZ-01A 11 3 Out-of-frame Inter-chr p21.2 q14.3 Seq+ 97676 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPHB2-MAST2 EPHB2 chr1 22711043 + MAST2 chr1 46002805 + Exonic hg38 OV TCGA-29-A5NZ-01A 10 6 Out-of-frame Intra-chr p36.12 Tumor suppressor gene p34.1 AGC:MAST Seq+ 97677 ChimerSeq TCGA FAWG TCGA_RNA-Seq SARNP-PTGES3 SARNP chr12 55817666 - PTGES3 chr12 56671847 - Exonic hg38 OV TCGA-30-1714-01A 111 0 In-Frame Intra-chr q13.2 q13.3 Seq+ 97678 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPA-PHYHD1 PTPA chr9 129120610 + PHYHD1 chr9 128927038 + Exonic hg38 OV TCGA-30-1714-01A 19 3 In-Frame Intra-chr q34.11 Tumor suppressor gene q34.11 97679 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACVR1-GNLY ACVR1 chr2 157875796 - GNLY chr2 85695320 + Exonic hg38 OV TCGA-30-1714-01A 15 5 5'UTR-CDS Intra-chr q24.1 p11.2 Seq+ 97680 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNNM2-RBP4 CNNM2 chr10 102920101 + RBP4 chr10 93594035 - Exonic hg38 OV TCGA-30-1714-01A 14 1 In-Frame Intra-chr q24.32 q23.33 Seq+ 97681 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPECC1L-CDH4 SPECC1L chr22 24369320 + CDH4 chr20 61852754 + Exonic hg38 OV TCGA-30-1714-01A 7 4 CDS-3'UTR Inter-chr q11.23 q13.33 Tumor suppressor gene Seq+ 97682 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF115-NOTCH2NL RNF115 chr1 145784539 - NOTCH2NL chr1 146156815 - Exonic hg38 OV TCGA-30-1714-01A 7 0 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 97683 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMNA-FLAD1 LMNA chr1 156115274 + FLAD1 chr1 154992713 + Exonic hg38 OV TCGA-30-1714-01A 6 3 Out-of-frame Intra-chr q22 q21.3 Seq+ 97684 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM32A-TPM4 FAM32A chr19 16185765 + TPM4 chr19 16076047 + Exonic hg38 OV TCGA-30-1718-01A 118 34 In-Frame Intra-chr p13.11 p13.12 Seq+ 97685 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2K-ENOPH1 UBE2K chr4 39755739 + ENOPH1 chr4 82454722 + Exonic hg38 OV TCGA-30-1718-01A 113 15 In-Frame Intra-chr p14 q21.22 Seq+ 97686 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP6NL-SVBP USP6NL chr10 11597631 - SVBP chr1 42816580 - Exonic hg38 OV TCGA-30-1718-01A 25 1 CDS-5'UTR Inter-chr p14 p34.2 97687 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC1-LCK HDAC1 chr1 32316782 + LCK chr1 32274325 + Exonic hg38 OV TCGA-30-1718-01A 24 1 CDS-5'UTR Intra-chr p35.2 Tumor suppressor gene p35.2 TK:Src Oncogene Seq+ 97688 ChimerSeq TCGA FAWG TCGA_RNA-Seq VAPA-SLC28A3 VAPA chr18 9914335 + SLC28A3 chr9 84313454 - Exonic hg38 OV TCGA-30-1718-01A 12 3 Out-of-frame Inter-chr p11.22 q21.33 Seq+ 97689 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANXA11-MAT1A ANXA11 chr10 80205343 - MAT1A chr10 80289678 - Exonic hg38 OV TCGA-30-1718-01A 12 0 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 97690 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2I-EIF4H GTF2I chr7 74716950 + EIF4H chr7 74189673 + Exonic hg38 OV TCGA-30-1718-01A 11 3 In-Frame Intra-chr q11.23 Transcription factor q11.23 97691 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLIC4-UBAP2L CLIC4 chr1 24745625 + UBAP2L chr1 154254836 + Exonic hg38 OV TCGA-30-1718-01A 11 0 In-Frame Intra-chr p36.11 q21.3 Seq+ 97692 ChimerSeq TCGA FAWG TCGA_RNA-Seq MUC16-ZSWIM4 MUC16 chr19 8902098 - ZSWIM4 chr19 13825550 + Exonic hg38 OV TCGA-30-1718-01A 6 5 Out-of-frame Intra-chr p13.2 p13.13 Seq+ 97693 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIEN1-WIPF2 MIEN1 chr17 39730194 - WIPF2 chr17 40256391 + Exonic hg38 OV TCGA-30-1853-01A 12 3 CDS-5'UTR Intra-chr q12 q21.2 Seq+ 97694 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGRN1-MSI2 MGRN1 chr16 4683932 + MSI2 chr17 57676987 + Exonic hg38 OV TCGA-30-1853-01A 8 3 Out-of-frame Inter-chr p13.3 q22 Seq+ 97695 ChimerSeq TCGA FAWG TCGA_RNA-Seq GGA3-NUP85 GGA3 chr17 75261548 - NUP85 chr17 75234637 + Exonic hg38 OV TCGA-30-1855-01A 34 4 In-Frame Intra-chr q25.1 q25.1 Seq+ 97696 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPARA-POLDIP3 PPARA chr22 46151970 + POLDIP3 chr22 42587572 - Exonic hg38 OV TCGA-30-1857-01A 17 0 5'UTR-CDS Intra-chr q13.31 Tumor suppressor gene Transcription factor q13.2 Seq+ 97697 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA5-CYSTM1 LAMA5 chr20 62329138 - CYSTM1 chr5 140243305 + Exonic hg38 OV TCGA-30-1857-01A 8 2 Out-of-frame Inter-chr q13.33 q31.3 Seq+ 97698 ChimerSeq TCGA FAWG TCGA_RNA-Seq FDFT1-DEFB135 FDFT1 chr8 11838573 + DEFB135 chr8 11984421 + Exonic hg38 OV TCGA-30-1860-01A 178 49 5'UTR-5'UTR Intra-chr p23.1 p23.1 Seq+ 97699 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATRX-CYSLTR1 ATRX chrX 77785982 - CYSLTR1 chrX 78283540 - Exonic hg38 OV TCGA-30-1860-01A 57 8 CDS-5'UTR Intra-chr q21.1 Oncogene q21.1 Seq+ 97700 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A9-SEC23IP SLC39A9 chr14 69399465 + SEC23IP chr10 119929607 + Exonic hg38 OV TCGA-30-1860-01A 27 8 In-Frame Inter-chr q24.1 q26.11 Seq+ 97701 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADNP-PSMD10P1 ADNP chr20 50928651 - PSMD10P1 chr20 50913775 + Exonic hg38 OV TCGA-30-1860-01A 25 6 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 97702 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADM2-PPP6R2 ADM2 chr22 50483080 + PPP6R2 chr22 50443866 + Exonic hg38 OV TCGA-30-1860-01A 17 1 3'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 97703 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATRX-FNDC3CP ATRX chrX 77785982 - FNDC3CP chrX 78170137 - Exonic hg38 OV TCGA-30-1860-01A 10 3 Out-of-frame Intra-chr q21.1 Oncogene q21.1 Seq+ 97704 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPLOC4-HEXDC NPLOC4 chr17 81622166 - HEXDC chr17 82428558 + Exonic hg38 OV TCGA-30-1861-01A 53 2 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 97705 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOPEY1-SMIM8 DOPEY1 chr6 83067779 + SMIM8 chr6 87337009 + Exonic hg38 OV TCGA-30-1861-01A 44 13 Out-of-frame Intra-chr q14.1 q15 Seq+ 97706 ChimerSeq TCGA FAWG TCGA_RNA-Seq TGFBR3-LRTM1 TGFBR3 chr1 91708663 - LRTM1 chr3 54925215 - Exonic hg38 OV TCGA-30-1861-01A 24 2 In-Frame Inter-chr p22.1 Tumor suppressor gene p14.3 Seq+ 97707 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD2-MRPL44 SETD2 chr3 47163854 - MRPL44 chr2 223959534 + Exonic hg38 OV TCGA-30-1861-01A 20 1 In-Frame Inter-chr p21.31 Oncogene Tumor suppressor gene q36.1 Seq+ 97708 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOK5-TSHZ2 DOK5 chr20 54476012 + TSHZ2 chr20 53487144 + Exonic hg38 OV TCGA-30-1861-01A 11 0 CDS-3'UTR Intra-chr q13.2 q13.2 Transcription factor Seq+ 97709 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXK2-PTPRN2 FOXK2 chr17 82520307 + PTPRN2 chr7 157898737 - Exonic hg38 OV TCGA-30-1861-01A 6 3 Out-of-frame Inter-chr q25.3 Transcription factor q36.3 Seq+ 97710 ChimerSeq TCGA FAWG TCGA_RNA-Seq TGFA-FAM136A TGFA chr2 70514859 - FAM136A chr2 70300980 - Exonic hg38 OV TCGA-30-1862-01A 7 2 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 97711 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1A-FAM76A ARID1A chr1 26697540 + FAM76A chr1 27727472 + Exonic hg38 OV TCGA-30-1862-01A 6 3 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p35.3 Seq+ 97712 ChimerSeq TCGA FAWG TCGA_RNA-Seq EMC6-CEACAM19 EMC6 chr17 3668899 + CEACAM19 chr19 44682567 + Exonic hg38 OV TCGA-30-1866-01A 136 210 5'UTR-CDS Inter-chr p13.2 q13.31 Seq+ 97713 ChimerSeq TCGA FAWG TCGA_RNA-Seq YIPF2-ELP5 YIPF2 chr19 10925686 - ELP5 chr17 7256857 + Exonic hg38 OV TCGA-30-1866-01A 20 8 In-Frame Inter-chr p13.2 p13.1 Seq+ 97714 ChimerSeq TCGA FAWG TCGA_RNA-Seq MUC16-OR7G3 MUC16 chr19 8961992 - OR7G3 chr19 9126895 - Exonic hg38 OV TCGA-30-1866-01A 10 1 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 97715 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTLC2-ATP5S SPTLC2 chr14 77570384 - ATP5S chr14 50322511 + Exonic hg38 OV TCGA-30-1866-01A 10 1 Out-of-frame Intra-chr q24.3 q21.3 Seq+ 97716 ChimerSeq TCGA FAWG TCGA_RNA-Seq APPL1-ABHD6 APPL1 chr3 57260774 + ABHD6 chr3 58293589 + Exonic hg38 OV TCGA-30-1866-01A 6 1 In-Frame Intra-chr p14.3 p14.3 Seq+ 97717 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC27-THCAT158 CDC27 chr17 47169917 - THCAT158 chr17 47303782 - Exonic hg38 OV TCGA-30-1866-01A 5 3 CDS-3'UTR Intra-chr q21.32 q21.32 97718 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXJ3-PGM1 FOXJ3 chr1 42199102 - PGM1 chr1 63629425 + Exonic hg38 OV TCGA-30-1891-01A 50 3 In-Frame Intra-chr p34.2 Transcription factor p31.3 Seq+ 97719 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBR5-CADM2 UBR5 chr8 102412173 - CADM2 chr3 85883291 + Exonic hg38 OV TCGA-31-1944-01A 22 3 Out-of-frame Inter-chr q22.3 Oncogene p12.1 Tumor suppressor gene Seq+ 97720 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGKV1OR10-IGKJ3 IGKV1OR10 chr10 42185788 + IGKJ3 chr2 88861255 - Exonic hg38 OV TCGA-31-1944-01A 13 0 Out-of-frame Inter-chr p11.2 97721 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD4-SPSB2 CHD4 chr12 6606274 - SPSB2 chr12 6882287 - Exonic hg38 OV TCGA-31-1946-01A 90 17 CDS-5'UTR Intra-chr p13.31 p13.31 Seq+ 97722 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSDE1-RBFOX1 CSDE1 chr1 114749821 - RBFOX1 chr16 7518147 + Exonic hg38 OV TCGA-31-1946-01A 80 15 5'UTR-CDS Inter-chr p13.2 p13.3 Seq+ 97723 ChimerSeq TCGA FAWG TCGA_RNA-Seq LGALS3-KIR2DL3 LGALS3 chr14 55129300 + KIR2DL3 chr19 54741980 + Exonic hg38 OV TCGA-31-1946-01A 21 1 5'UTR-3'UTR Inter-chr q22.3 Seq+ 97724 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERI2-DNAH3 ERI2 chr16 20896308 - DNAH3 chr16 20944663 - Exonic hg38 OV TCGA-31-1946-01A 20 2 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 97725 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIEF1-TAB1 MIEF1 chr22 39504534 + TAB1 chr22 39436490 + Exonic hg38 OV TCGA-31-1946-01A 20 2 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 97726 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP25-CROCC2 USP25 chr21 15730438 + CROCC2 chr2 240946060 + Exonic hg38 OV TCGA-31-1946-01A 15 3 In-Frame Inter-chr q21.1 q37.3 97727 ChimerSeq TCGA FAWG TCGA_RNA-Seq CALHM2-CALHM1 CALHM2 chr10 103447148 - CALHM1 chr10 103455747 - Exonic hg38 OV TCGA-31-1946-01A 10 8 3'UTR-CDS Intra-chr q24.33 q24.33 97728 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCUN1D3-DNAH3 DCUN1D3 chr16 20896308 - DNAH3 chr16 20944663 - Exonic hg38 OV TCGA-31-1946-01A 9 1 5'UTR-CDS Intra-chr p12.3 Tumor suppressor gene p12.3 Seq+ 97729 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACVR1-NFATC1 ACVR1 chr2 157818385 - NFATC1 chr18 79486248 + Exonic hg38 OV TCGA-31-1946-01A 2 0 5'UTR-CDS Inter-chr q24.1 q23 Transcription factor Seq+ 97730 ChimerSeq TCGA FAWG TCGA_RNA-Seq HGSNAT-VSTM2B HGSNAT chr8 43182260 + VSTM2B chr19 29563846 + Exonic hg38 OV TCGA-31-1950-01A 278 149 Out-of-frame Inter-chr p11.21 q12 Seq+ 97731 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF181-PEPD ZNF181 chr19 34735046 + PEPD chr19 33493337 - Exonic hg38 OV TCGA-31-1950-01A 52 14 In-Frame Intra-chr q13.11 Transcription factor q13.11 Seq+ 97732 ChimerSeq TCGA FAWG TCGA_RNA-Seq LGR6-RNF152 LGR6 chr1 202235993 + RNF152 chr18 61816598 - Exonic hg38 OV TCGA-31-1950-01A 31 5 CDS-5'UTR Inter-chr q32.1 q21.33 Seq+ 97733 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNS1-SNX1 TNS1 chr2 217978765 - SNX1 chr15 64112573 + Exonic hg38 OV TCGA-31-1951-01A 160 15 5'UTR-CDS Inter-chr q35 q22.31 Seq+ 97734 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAP30BP-LLGL2 SAP30BP chr17 75671863 + LLGL2 chr17 75563016 + Exonic hg38 OV TCGA-31-1951-01A 62 11 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 97735 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANAPC7-PDE11A ANAPC7 chr12 110395101 - PDE11A chr2 177728172 - Exonic hg38 OV TCGA-31-1951-01A 62 8 In-Frame Inter-chr q24.11 q31.2 Seq+ 97736 ChimerSeq TCGA FAWG TCGA_RNA-Seq PERP-TULP1 PERP chr6 138107127 - TULP1 chr6 35509928 - Exonic hg38 OV TCGA-31-1951-01A 49 4 In-Frame Intra-chr q23.3 p21.31 Seq+ 97737 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT11-ORAI1 GALNT11 chr7 152025884 + ORAI1 chr12 121641041 + Exonic hg38 OV TCGA-31-1951-01A 37 4 CDS-3'UTR Inter-chr q36.1 q24.31 Seq+ 97738 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC23B-DTD1 SEC23B chr20 18507990 + DTD1 chr20 18744100 + Exonic hg38 OV TCGA-31-1951-01A 29 1 5'UTR-CDS Intra-chr p11.23 p11.23 Seq+ 97739 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAF3IP1-GALNTL5 TRAF3IP1 chr2 238349408 + GALNTL5 chr7 152019646 + Exonic hg38 OV TCGA-31-1951-01A 27 4 Out-of-frame Inter-chr q37.3 q36.1 Seq+ 97740 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK5RAP1-TMEM248 CDK5RAP1 chr20 33379461 - TMEM248 chr7 66941848 + Exonic hg38 OV TCGA-31-1951-01A 22 6 CDS-5'UTR Inter-chr q11.21 q11.21 Seq+ 97741 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENGASE-TNRC6C ENGASE chr17 79080364 + TNRC6C chr17 78086503 + Exonic hg38 OV TCGA-31-1951-01A 21 3 In-Frame Intra-chr q25.3 q25.3 Seq+ 97742 ChimerSeq TCGA FAWG TCGA_RNA-Seq POR-CTTNBP2 POR chr7 75954180 + CTTNBP2 chr7 117728267 - Exonic hg38 OV TCGA-31-1951-01A 17 1 Out-of-frame Intra-chr q11.23 q31.31 Seq+ 97743 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM171A1-ITGA8 FAM171A1 chr10 15370956 - ITGA8 chr10 15644221 - Exonic hg38 OV TCGA-31-1951-01A 11 3 In-Frame Intra-chr p13 p13 Seq+ 97744 ChimerSeq TCGA FAWG TCGA_RNA-Seq STRIP1-LITAF STRIP1 chr1 110038757 + LITAF chr16 11633637 - Exonic hg38 OV TCGA-31-1951-01A 8 2 5'UTR-5'UTR Inter-chr p13.3 p13.13 Tumor suppressor gene 97745 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB7A-CHCHD6 RAB7A chr3 128726359 + CHCHD6 chr3 126852647 + Exonic hg38 OV TCGA-31-1953-01A 76 11 5'UTR-CDS Intra-chr q21.3 Tumor suppressor gene q21.3 Seq+ 97746 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASXL1-HCK ASXL1 chr20 32358832 + HCK chr20 32071662 + Exonic hg38 OV TCGA-31-1953-01A 27 9 Out-of-frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 TK:Src Seq+ 97747 ChimerSeq TCGA FAWG TCGA_RNA-Seq DVL1-ITPA DVL1 chr1 1337977 - ITPA chr20 3221841 + Exonic hg38 OV TCGA-31-1953-01A 16 13 Out-of-frame Inter-chr p36.33 p13 Seq+ 97748 ChimerSeq TCGA FAWG TCGA_RNA-Seq LTBR-ITFG2 LTBR chr12 6385379 + ITFG2 chr12 2817223 + Exonic hg38 OV TCGA-31-1953-01A 12 3 Out-of-frame Intra-chr p13.31 p13.33 Seq+ 97749 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAMBP-SPR STAMBP chr2 73831059 + SPR chr2 72888314 + Exonic hg38 OV TCGA-31-1953-01A 8 3 Out-of-frame Intra-chr p13.1 p13.2 Seq+ 97750 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDC1-YIPF1 NDC1 chr1 53787158 - YIPF1 chr1 53860153 - Exonic hg38 OV TCGA-31-1956-01A 13 2 In-Frame Intra-chr p32.3 p32.3 Seq+ 97751 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHN2-SKAP2 CHN2 chr7 29194990 + SKAP2 chr7 26739964 - Exonic hg38 OV TCGA-31-1956-01A 12 0 In-Frame Intra-chr p14.3 p15.2 Seq+ 97752 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1XR1-MIPEP TBL1XR1 chr3 177197121 - MIPEP chr13 23756618 - Exonic hg38 OV TCGA-31-1959-01A 138 44 5'UTR-CDS Inter-chr q26.32 q12.12 Seq+ 97753 ChimerSeq TCGA FAWG TCGA_RNA-Seq DICER1-UVRAG DICER1 chr14 95157230 - UVRAG chr11 76115924 + Exonic hg38 OV TCGA-31-1959-01A 24 3 5'UTR-CDS Inter-chr q32.13 Oncogene Tumor suppressor gene q13.5 Tumor suppressor gene Seq+ 97754 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN2-PTPRD PTPN2 chr18 12859164 - PTPRD chr9 8341978 - Exonic hg38 OV TCGA-31-1959-01A 21 0 Out-of-frame Inter-chr p11.21 Tumor suppressor gene Oncogene Tumor suppressor gene 97755 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFKBID-TYROBP NFKBID chr19 35895980 - TYROBP chr19 35904634 - Exonic hg38 OV TCGA-31-1959-01A 13 3 In-Frame Intra-chr q13.12 q13.12 Seq+ 97756 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMKK2-ANAPC5 CAMKK2 chr12 121296638 - ANAPC5 chr12 121309863 - Exonic hg38 OV TCGA-31-1959-01A 4 0 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 97757 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPPL3-OASL SPPL3 chr12 120903845 - OASL chr12 121021058 - Exonic hg38 OV TCGA-36-1568-01A 69 15 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 97758 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIPK1-TTC27 RIPK1 chr6 3064059 + TTC27 chr2 32702807 + Exonic hg38 OV TCGA-36-1568-01A 10 2 5'UTR-CDS Inter-chr p25.2 TKL:RIPK p22.3 Seq+ 97759 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAZN-FHAD1 KAZN chr1 14960875 + FHAD1 chr1 15289399 + Exonic hg38 OV TCGA-36-1568-01A 7 6 Out-of-frame Intra-chr p36.21 p36.21 Seq+ 97760 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNS3-FGF10 TNS3 chr7 47529036 - FGF10 chr5 44389056 - Exonic hg38 OV TCGA-36-1569-01A 84 6 5'UTR-5'UTR Inter-chr p12.3 p12 Seq+ 97761 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNC5A-TTC38 UNC5A chr5 176810820 + TTC38 chr22 46285241 + Exonic hg38 OV TCGA-36-1570-01A 38 10 Out-of-frame Inter-chr q35.2 Tumor suppressor gene q13.31 Seq+ 97762 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP8-UTS2 ARHGAP8 chr22 44752627 + UTS2 chr1 7853505 - Exonic hg38 OV TCGA-36-1570-01A 36 17 5'UTR-5'UTR Inter-chr q13.31 p36.23 Seq+ 97763 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASS1-HMCN2 ASS1 chr9 130454373 + HMCN2 chr9 130418772 + Exonic hg38 OV TCGA-36-1570-01A 28 13 Out-of-frame Intra-chr q34.11 Tumor suppressor gene q34.11 Seq+ 97764 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICALL1-EIF3L MICALL1 chr22 37942343 + EIF3L chr22 37863005 + Exonic hg38 OV TCGA-36-1570-01A 26 11 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 97765 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFAF5-ESF1 NDUFAF5 chr20 13794941 + ESF1 chr20 13776270 - Exonic hg38 OV TCGA-36-1570-01A 12 14 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 97766 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM47-EXOC1 RBM47 chr4 40544422 - EXOC1 chr4 55877917 + Exonic hg38 OV TCGA-36-1571-01A 95 38 5'UTR-CDS Intra-chr p14 q12 Seq+ 97767 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOK5-CLEC17A DOK5 chr20 54643578 + CLEC17A chr19 14606993 + Exonic hg38 OV TCGA-36-1571-01A 6 7 Out-of-frame Inter-chr q13.2 p13.12 Seq+ 97768 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC1-XKR3 EXOC1 chr4 55871233 + XKR3 chr22 16808083 - Exonic hg38 OV TCGA-36-1571-01A 6 6 CDS-5'UTR Inter-chr q12 q11.1 Seq+ 97769 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH2-PSMA5 NOTCH2 chr1 120069334 - PSMA5 chr1 109421926 - Exonic hg38 OV TCGA-36-1574-01A 70 34 Out-of-frame Intra-chr p12 Oncogene Tumor suppressor gene p13.3 Seq+ 97770 ChimerSeq TCGA FAWG TCGA_RNA-Seq EZH1-ZC3H3 EZH1 chr17 42728825 - ZC3H3 chr8 143441120 - Exonic hg38 OV TCGA-36-1574-01A 45 58 CDS-5'UTR Inter-chr q21.2 Tumor suppressor gene Seq+ 97771 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX60L-DSCAM DDX60L chr4 168453124 - DSCAM chr21 40187987 - Exonic hg38 OV TCGA-36-1574-01A 31 22 In-Frame Inter-chr q32.3 q22.2 Seq+ 97772 ChimerSeq TCGA FAWG TCGA_RNA-Seq LARGE1-OPA3 LARGE1 chr22 33564848 - OPA3 chr19 45553911 - Exonic hg38 OV TCGA-36-1574-01A 25 13 In-Frame Inter-chr q12.3 q13.32 97773 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD8-SLC22A20 FRMD8 chr11 65405068 + SLC22A20 chr11 65236409 + Exonic hg38 OV TCGA-36-1574-01A 14 17 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 97774 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC25A-PRKAR2A CDC25A chr3 48174284 - PRKAR2A chr3 48783092 - Exonic hg38 OV TCGA-36-1575-01A 17 7 In-Frame Intra-chr p21.31 p21.31 Seq+ 97775 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTMR3-ZNRF3 MTMR3 chr22 29883359 + ZNRF3 chr22 28987076 + Exonic hg38 OV TCGA-36-1575-01A 14 3 5'UTR-5'UTR Intra-chr q12.2 q12.1 Seq+ 97776 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANSL3-ANKRD36 KANSL3 chr2 96631312 - ANKRD36 chr2 97264329 + Exonic hg38 OV TCGA-36-1575-01A 12 6 3'UTR-3'UTR Intra-chr q11.2 q11.2 Seq+ 97777 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD81-KCNQ1 CD81 chr11 2377615 + KCNQ1 chr11 2661961 + Exonic hg38 OV TCGA-36-1576-01A 16 7 CDS-3'UTR Intra-chr p15.5 p15.5 Seq+ 97778 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAM9-C17orf51 ADAM9 chr8 39055772 + C17orf51 chr17 21535538 - Exonic hg38 OV TCGA-36-1576-01A 9 4 Out-of-frame Inter-chr p11.2 Seq+ 97779 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHPN2-SLC7A10 RHPN2 chr19 33064784 - SLC7A10 chr19 33215973 - Exonic hg38 OV TCGA-36-1576-01A 6 6 Out-of-frame Intra-chr q13.11 q13.11 Seq+ 97780 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRC2B-NTNG2 PRRC2B chr9 131394263 + NTNG2 chr9 132197966 + Exonic hg38 OV TCGA-36-1576-01A 6 5 5'UTR-CDS Intra-chr q34.13 q34.13 Seq+ 97781 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3D-SMARCA4 RAB3D chr19 11335447 - SMARCA4 chr19 10980777 + Exonic hg38 OV TCGA-36-1576-01A 5 7 CDS-5'UTR Intra-chr p13.2 p13.2 Oncogene Tumor suppressor gene 97782 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANK3-SPC24 KANK3 chr19 8334500 - SPC24 chr19 11149238 - Exonic hg38 OV TCGA-36-1576-01A 5 5 In-Frame Intra-chr p13.2 p13.2 Seq+ 97783 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKRN1-MRPS33 MKRN1 chr7 140479160 - MRPS33 chr7 141010660 - Exonic hg38 OV TCGA-36-1577-01A 181 122 5'UTR-5'UTR Intra-chr q34 q34 Seq+ 97784 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHML-RGS7 CHML chr1 241639882 - RGS7 chr1 241098762 - Exonic hg38 OV TCGA-36-1577-01A 32 11 5'UTR-5'UTR Intra-chr q43 q43 97785 ChimerSeq TCGA FAWG TCGA_RNA-Seq OPN3-RGS7 OPN3 chr1 241639882 - RGS7 chr1 241098762 - Exonic hg38 OV TCGA-36-1577-01A 32 11 Out-of-frame Intra-chr q43 q43 Seq+ 97786 ChimerSeq TCGA FAWG TCGA_RNA-Seq FYTTD1-DDOST FYTTD1 chr3 197756557 + DDOST chr1 20656187 - Exonic hg38 OV TCGA-36-1577-01A 28 12 In-Frame Inter-chr q29 p36.12 Seq+ 97787 ChimerSeq TCGA FAWG TCGA_RNA-Seq RLF-C2orf81 RLF chr1 40202614 + C2orf81 chr2 74398701 - Exonic hg38 OV TCGA-36-1577-01A 20 16 CDS-3'UTR Inter-chr p34.2 Transcription factor p13.1 97788 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF27-C9orf64 KIF27 chr9 83908452 - C9orf64 chr9 83955640 - Exonic hg38 OV TCGA-36-1577-01A 14 4 In-Frame Intra-chr q21.32 q21.32 Seq+ 97789 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC28-UBE2L3 TTC28 chr22 28629552 - UBE2L3 chr22 21592861 + Exonic hg38 OV TCGA-36-1577-01A 13 4 In-Frame Intra-chr q12.1 q11.21 Seq+ 97790 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM63B-ACTL10 TMEM63B chr6 44141098 + ACTL10 chr20 33667708 + Exonic hg38 OV TCGA-36-1577-01A 10 12 Out-of-frame Inter-chr p21.1 q11.22 Seq+ 97791 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPP-DDX51 LPP chr3 188760282 + DDX51 chr12 132142878 - Exonic hg38 OV TCGA-36-1577-01A 11 5 In-Frame Inter-chr q27.3 Oncogene q24.33 Seq+ 97792 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPIDR-DSCAM SPIDR chr8 47294030 + DSCAM chr21 40187987 - Exonic hg38 OV TCGA-36-1577-01A 9 7 In-Frame Inter-chr q11.21 q22.2 Seq+ 97793 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEF1G-SLC22A6 EEF1G chr11 62566806 - SLC22A6 chr11 62936486 - Exonic hg38 OV TCGA-36-1578-01A 128 68 CDS-3'UTR Intra-chr q12.3 q12.3 Seq+ 97794 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUPV3L1-VPS26A SUPV3L1 chr10 69203043 + VPS26A chr10 69155812 + Exonic hg38 OV TCGA-36-1578-01A 47 18 In-Frame Intra-chr q22.1 q22.1 Seq+ 97795 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHERP-MED26 CHERP chr19 16541870 - MED26 chr19 16578409 - Exonic hg38 OV TCGA-36-1578-01A 24 11 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 97796 ChimerSeq TCGA FAWG TCGA_RNA-Seq URI1-TYW1B URI1 chr19 29971227 + TYW1B chr7 72616839 - Exonic hg38 OV TCGA-36-1578-01A 16 23 Out-of-frame Inter-chr q12 q11.23 Seq+ 97797 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF721-YAP1 ZNF721 chr4 499056 - YAP1 chr11 102186018 + Exonic hg38 OV TCGA-36-1578-01A 2 21 5'UTR-CDS Inter-chr p16.3 Transcription factor q22.1 Tumor suppressor gene Seq+ 97798 ChimerSeq TCGA FAWG TCGA_RNA-Seq C4A-SAPCD1 C4A chr6 31984408 + SAPCD1 chr6 31764436 + Exonic hg38 OV TCGA-36-1581-01A 20 5 3'UTR-3'UTR Intra-chr 97799 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2D2-OR7A5 UBE2D2 chr5 139600435 + OR7A5 chr19 14800764 - Exonic hg38 OV TCGA-36-1581-01A 13 2 CDS-3'UTR Inter-chr q31.2 p13.12 Seq+ 97800 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPZB-TMCO4 CAPZB chr1 19485436 - TMCO4 chr1 19700885 - Exonic hg38 OV TCGA-36-1581-01A 10 12 Out-of-frame Intra-chr p36.13 p36.13 Seq+ 97801 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH1-LCN15 NOTCH1 chr9 136544024 - LCN15 chr9 136763965 - Exonic hg38 OV TCGA-36-1581-01A 9 3 Out-of-frame Intra-chr q34.3 Oncogene Tumor suppressor gene q34.3 Seq+ 97802 ChimerSeq TCGA FAWG TCGA_RNA-Seq G2E3-AP4S1 G2E3 chr14 30559272 + AP4S1 chr14 31066126 + Exonic hg38 OV TCGA-36-1581-01A 3 11 5'UTR-5'UTR Intra-chr q12 q12 Seq+ 97803 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARA-CDK12 RARA chr17 40348464 + CDK12 chr17 39530604 + Exonic hg38 OV TCGA-3P-A9WA-01A 48 24 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q12 Oncogene Seq+ 97804 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0232-MAN2B2 KIAA0232 chr4 6876757 + MAN2B2 chr4 6609107 + Exonic hg38 OV TCGA-3P-A9WA-01A 41 11 Out-of-frame Intra-chr p16.1 p16.1 Seq+ 97805 ChimerSeq TCGA FAWG TCGA_RNA-Seq STX18-LYAR STX18 chr4 4438394 - LYAR chr4 4286572 - Exonic hg38 OV TCGA-3P-A9WA-01A 25 6 CDS-5'UTR Intra-chr p16.2 p16.3 Seq+ 97806 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPF2-CDK12 WIPF2 chr17 40265146 + CDK12 chr17 39564760 + Exonic hg38 OV TCGA-3P-A9WA-01A 14 2 CDS-3'UTR Intra-chr q21.2 q12 Oncogene Seq+ 97807 ChimerSeq TCGA FAWG TCGA_RNA-Seq STUB1-MECP2 STUB1 chr16 680684 + MECP2 chrX 154032557 - Exonic hg38 OV TCGA-57-1582-01A 24 8 Out-of-frame Inter-chr p13.3 Tumor suppressor gene q28 Transcription factor Seq+ 97808 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC20-UQCRC2 ZDHHC20 chr13 21459054 - UQCRC2 chr16 21968628 + Exonic hg38 OV TCGA-57-1582-01A 8 10 5'UTR-5'UTR Inter-chr q12.11 Seq+ 97809 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAM10-BLVRB ADAM10 chr15 58749480 - BLVRB chr19 40458545 - Exonic hg38 OV TCGA-57-1582-01A 9 5 In-Frame Inter-chr q21.3 q13.2 Seq+ 97810 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKMY1-PDE11A ANKMY1 chr2 240499958 - PDE11A chr2 177769373 - Exonic hg38 OV TCGA-57-1582-01A 10 0 Out-of-frame Intra-chr q37.3 q31.2 Seq+ 97811 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM168A-DCAF8 FAM168A chr11 73468405 - DCAF8 chr1 160244034 - Exonic hg38 OV TCGA-57-1582-01A 9 4 CDS-5'UTR Inter-chr q13.4 q23.2 Seq+ 97812 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAF2-KIAA1191 FAF2 chr5 176448470 + KIAA1191 chr5 176355749 - Exonic hg38 OV TCGA-57-1582-01A 5 16 Out-of-frame Intra-chr q35.2 q35.2 Seq+ 97813 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAF7-RAB26 TRAF7 chr16 2155858 + RAB26 chr16 2151569 + Exonic hg38 OV TCGA-57-1582-01A 9 0 5'UTR-CDS Intra-chr p13.3 Oncogene p13.3 Seq+ 97814 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF43-MRPS23 RNF43 chr17 58415325 - MRPS23 chr17 57849409 - Exonic hg38 OV TCGA-57-1582-01A 7 7 Out-of-frame Intra-chr q22 Oncogene q22 Seq+ 97815 ChimerSeq TCGA FAWG TCGA_RNA-Seq CGREF1-TRMT44 CGREF1 chr2 27104287 - TRMT44 chr4 8493266 + Exonic hg38 OV TCGA-57-1582-01A 7 6 CDS-3'UTR Inter-chr p23.3 p16.1 Seq+ 97816 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC30A6-BRE SLC30A6 chr2 32175361 + BRE chr2 28237202 + Exonic hg38 OV TCGA-57-1583-01A 90 34 Out-of-frame Intra-chr p22.3 Seq+ 97817 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2B3-CNTNAP2 EIF2B3 chr1 44926628 - CNTNAP2 chr7 147643387 + Exonic hg38 OV TCGA-57-1583-01A 23 6 CDS-3'UTR Inter-chr p34.1 Tumor suppressor gene 97818 ChimerSeq TCGA FAWG TCGA_RNA-Seq THRA-GSDMA THRA chr17 40077608 + GSDMA chr17 39965683 + Exonic hg38 OV TCGA-57-1583-01A 20 9 CDS-5'UTR Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Seq+ 97819 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF235-ACTN4 ZNF235 chr19 44298808 - ACTN4 chr19 38700600 + Exonic hg38 OV TCGA-57-1583-01A 7 5 CDS-3'UTR Intra-chr q13.31 Transcription factor Seq+ 97820 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD10-COLEC10 BTBD10 chr11 13445024 - COLEC10 chr8 119089680 + Exonic hg38 OV TCGA-57-1584-01A 5 7 Out-of-frame Inter-chr p15.3 q24.12 Seq+ 97821 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPZA2-C7orf33 CAPZA2 chr7 116898835 + C7orf33 chr7 148614042 + Exonic hg38 OV TCGA-57-1585-01A 23 8 In-Frame Intra-chr q31.2 q36.1 Seq+ 97822 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPO7-NBN XPO7 chr8 21919788 + NBN chr8 89971290 - Exonic hg38 OV TCGA-57-1585-01A 17 1 Out-of-frame Intra-chr p21.3 q21.3 Oncogene Tumor suppressor gene Seq+ 97823 ChimerSeq TCGA FAWG TCGA_RNA-Seq FMNL1-NMT1 FMNL1 chr17 45222253 + NMT1 chr17 45081644 + Exonic hg38 OV TCGA-57-1585-01A 16 2 Out-of-frame Intra-chr q21.31 q21.31 Seq+ 97824 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFAP1-EVC2 AFAP1 chr4 7939656 - EVC2 chr4 5568640 - Exonic hg38 OV TCGA-57-1585-01A 15 3 5'UTR-CDS Intra-chr p16.1 p16.2 Seq+ 97825 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLF2-LPCAT3 MLF2 chr12 6752285 - LPCAT3 chr12 6977262 - Exonic hg38 OV TCGA-57-1585-01A 15 1 Out-of-frame Intra-chr p13.31 p13.31 Seq+ 97826 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMK1D-PROSER2 CAMK1D chr10 12553356 + PROSER2 chr10 11851997 + Exonic hg38 OV TCGA-57-1585-01A 14 3 5'UTR-5'UTR Intra-chr p13 p14 Seq+ 97827 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALT2-JAK1 B4GALT2 chr1 43981924 + JAK1 chr1 64886341 - Exonic hg38 OV TCGA-57-1586-01A 39 4 CDS-5'UTR Intra-chr p34.1 p31.3 TK:JakA Oncogene Seq+ 97828 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHRF1-RASSF7 PHRF1 chr11 591467 + RASSF7 chr11 561762 + Exonic hg38 OV TCGA-57-1586-01A 16 3 3'UTR-3'UTR Intra-chr p15.5 p15.5 Seq+ 97829 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF1-FAM200A SMURF1 chr7 99143726 - FAM200A chr7 99548506 - Exonic hg38 OV TCGA-57-1586-01A 9 2 CDS-5'UTR Intra-chr q22.1 Seq+ 97830 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTAN1-TBC1D13 SPTAN1 chr9 128568897 + TBC1D13 chr9 128803250 + Exonic hg38 OV TCGA-57-1993-01A 75 23 In-Frame Intra-chr q34.11 q34.11 Seq+ 97831 ChimerSeq TCGA FAWG TCGA_RNA-Seq FASTKD5-LZTS3 FASTKD5 chr20 3159766 - LZTS3 chr20 3167961 - Exonic hg38 OV TCGA-57-1993-01A 35 45 5'UTR-5'UTR Intra-chr p13 p13 Seq+ 97832 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBOX5-LZTS3 UBOX5 chr20 3159766 - LZTS3 chr20 3167961 - Exonic hg38 OV TCGA-57-1993-01A 35 45 5'UTR-5'UTR Intra-chr p13 p13 Seq+ 97833 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF3M-CSTF3 EIF3M chr11 32583929 + CSTF3 chr11 33141986 - Exonic hg38 OV TCGA-57-1993-01A 15 26 In-Frame Intra-chr p13 p13 Seq+ 97834 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPNE2-YWHAEP7 CPNE2 chr16 57127903 + YWHAEP7 chr17 37828964 - Exonic hg38 OV TCGA-57-1993-01A 18 7 CDS-5'UTR Inter-chr q13 q12 97835 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS4-NARS2 INTS4 chr11 77955942 - NARS2 chr11 78466013 - Exonic hg38 OV TCGA-57-1993-01A 15 4 In-Frame Intra-chr q14.1 q14.1 Seq+ 97836 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0753-HSBP1L1 KIAA0753 chr17 6640637 - HSBP1L1 chr18 79970440 + Exonic hg38 OV TCGA-57-1993-01A 11 3 5'UTR-CDS Inter-chr p13.1 q23 Seq+ 97837 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASSF8-LRMP RASSF8 chr12 25995130 + LRMP chr12 25011371 + Exonic hg38 OV TCGA-57-1993-01A 9 5 5'UTR-5'UTR Intra-chr p12.1 Tumor suppressor gene p12.1 Tumor suppressor gene 97838 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYL12A-MYOM1 MYL12A chr18 3254050 + MYOM1 chr18 3219878 - Exonic hg38 OV TCGA-57-1993-01A 9 1 CDS-5'UTR Intra-chr p11.31 p11.31 Seq+ 97839 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPIN2-COPS3 LPIN2 chr18 3013087 - COPS3 chr17 17249039 - Exonic hg38 OV TCGA-57-1993-01A 3 5 5'UTR-CDS Inter-chr p11.31 p11.2 Seq+ 97840 ChimerSeq TCGA FAWG TCGA_RNA-Seq DVL3-ECE2 DVL3 chr3 184168065 + ECE2 chr3 184292062 + Exonic hg38 OV TCGA-57-1994-01A 38 9 Out-of-frame Intra-chr q27.1 q27.1 Seq+ 97841 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH3-HOXD11 NOTCH3 chr19 15192048 - HOXD11 chr2 176104557 + Exonic hg38 OV TCGA-57-1994-01A 11 10 Out-of-frame Inter-chr p13.12 Oncogene Tumor suppressor gene q31.1 Transcription factor Seq+ 97842 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH3-HOXD10 NOTCH3 chr19 15197500 - HOXD10 chr2 176108907 + Exonic hg38 OV TCGA-57-1994-01A 9 3 CDS-5'UTR Inter-chr p13.12 Oncogene Tumor suppressor gene q31.1 Transcription factor Seq+ 97843 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPINT2-TYROBP SPINT2 chr19 38264998 + TYROBP chr19 35907580 - Exonic hg38 OV TCGA-57-1994-01A 4 7 In-Frame Intra-chr q13.2 Tumor suppressor gene q13.12 Seq+ 97844 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF83-TARM1 ZNF83 chr19 52655561 - TARM1 chr19 54070160 - Exonic hg38 OV TCGA-59-2348-01A 254 38 5'UTR-5'UTR Intra-chr q13.41 Transcription factor Seq+ 97845 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC48A1-HECA SLC48A1 chr12 47773440 + HECA chr6 139166284 + Exonic hg38 OV TCGA-59-2348-01A 30 4 In-Frame Inter-chr q13.11 q24.1 Tumor suppressor gene Seq+ 97846 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM118A-NUP50 FAM118A chr22 45310183 + NUP50 chr22 45181286 + Exonic hg38 OV TCGA-59-2348-01A 17 3 5'UTR-CDS Intra-chr q13.31 q13.31 Seq+ 97847 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN2-FOXA1 PTPN2 chr18 12884073 - FOXA1 chr14 37592711 - Exonic hg38 OV TCGA-59-2348-01A 17 3 In-Frame Inter-chr p11.21 Tumor suppressor gene q21.1 Tumor suppressor gene Transcription factor Seq+ 97848 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD28-TBC1D5 ANKRD28 chr3 15677517 - TBC1D5 chr3 17160486 - Exonic hg38 OV TCGA-59-2348-01A 14 3 Out-of-frame Intra-chr p25.1 p24.3 Seq+ 97849 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRP36-PPP2R5D RRP36 chr6 43021784 + PPP2R5D chr6 43006463 + Exonic hg38 OV TCGA-59-2348-01A 12 1 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 97850 ChimerSeq TCGA FAWG TCGA_RNA-Seq PFKFB2-GDAP1L1 PFKFB2 chr1 207065160 + GDAP1L1 chr20 44263230 + Exonic hg38 OV TCGA-59-2348-01A 12 0 Out-of-frame Inter-chr q32.1 q13.12 Seq+ 97851 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC38A2-C12orf4 SLC38A2 chr12 46364389 - C12orf4 chr12 4525583 - Exonic hg38 OV TCGA-59-2348-01A 10 5 Out-of-frame Intra-chr q13.11 p13.32 Seq+ 97852 ChimerSeq TCGA FAWG TCGA_RNA-Seq POR-MDH2 POR chr7 75915179 + MDH2 chr7 76054830 + Exonic hg38 OV TCGA-59-2348-01A 11 0 5'UTR-CDS Intra-chr q11.23 q11.23 Seq+ 97853 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAD3-MAP2K1 SMAD3 chr15 67066360 + MAP2K1 chr15 66435027 + Exonic hg38 OV TCGA-59-2351-01A 21 9 In-Frame Intra-chr q22.33 Transcription factor q22.31 STE:STE7 Oncogene Seq+ 97854 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC31A-SCD5 SEC31A chr4 82891088 - SCD5 chr4 82636823 - Exonic hg38 OV TCGA-59-2352-01A 69 4 Out-of-frame Intra-chr q21.22 q21.22 Seq+ 97855 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAFAH1B1-NTN1 PAFAH1B1 chr17 2594006 + NTN1 chr17 9162813 + Exonic hg38 OV TCGA-59-2352-01A 16 4 5'UTR-CDS Intra-chr p13.3 Tumor suppressor gene p13.1 Seq+ 97856 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2G1-MFSD1P1 UBE2G1 chr17 4296717 - MFSD1P1 chr17 4302202 + Exonic hg38 OV TCGA-59-2352-01A 9 1 Out-of-frame Intra-chr p13.2 p13.2 97857 ChimerSeq TCGA FAWG TCGA_RNA-Seq CERS5-LIMA1 CERS5 chr12 50134546 - LIMA1 chr12 50206068 - Exonic hg38 OV TCGA-59-2354-01A 34 4 In-Frame Intra-chr q13.12 q13.12 Tumor suppressor gene Seq+ 97858 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDCD10-CNKSR2 PDCD10 chr3 167734806 - CNKSR2 chrX 21648831 + Exonic hg38 OV TCGA-59-2354-01A 31 4 5'UTR-CDS Inter-chr q26.1 p22.12 Seq+ 97859 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC82-KCCAT333 CCDC82 chr11 96358993 - KCCAT333 chr7 17448881 + Exonic hg38 OV TCGA-59-2354-01A 23 6 CDS-5'UTR Inter-chr q21 97860 ChimerSeq TCGA FAWG TCGA_RNA-Seq AUTS2-BPI AUTS2 chr7 69599962 + BPI chr20 38288716 + Exonic hg38 OV TCGA-59-2354-01A 12 3 CDS-5'UTR Inter-chr q11.22 q11.23 Seq+ 97861 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-RAB11FIP4 NF1 chr17 31265339 + RAB11FIP4 chr17 31431813 + Exonic hg38 OV TCGA-59-2354-01A 6 0 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 97862 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMB2-C1orf94 PSMB2 chr1 35631274 - C1orf94 chr1 34208157 + Exonic hg38 OV TCGA-59-2355-01A 549 70 In-Frame Intra-chr p34.3 p35.1 Seq+ 97863 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOMER2-TM6SF1 HOMER2 chr15 82952531 - TM6SF1 chr15 83112797 + Exonic hg38 OV TCGA-59-2363-01A 42 10 In-Frame Intra-chr q25.2 Tumor suppressor gene q25.2 Seq+ 97864 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAG1-POLR2K SPAG1 chr8 100158118 + POLR2K chr8 100151347 + Exonic hg38 OV TCGA-59-2363-01A 22 5 5'UTR-5'UTR Intra-chr q22.2 q22.2 Seq+ 97865 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAST4-PPWD1 MAST4 chr5 67090231 + PPWD1 chr5 65567513 + Exonic hg38 OV TCGA-59-2363-01A 22 1 Out-of-frame Intra-chr q12.3 AGC:MAST q12.3 Seq+ 97866 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDOA-PANK2 ALDOA chr16 30068536 + PANK2 chr20 3929347 + Exonic hg38 OV TCGA-59-2363-01A 9 0 Out-of-frame Inter-chr p11.2 p13 97867 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHNAK-EEF1G AHNAK chr11 62533661 - EEF1G chr11 62560454 - Exonic hg38 OV TCGA-59-2363-01A 7 2 In-Frame Intra-chr q12.3 Tumor suppressor gene q12.3 Seq+ 97868 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXT1-PTK2 EXT1 chr8 117804722 - PTK2 chr8 140764290 - Exonic hg38 OV TCGA-59-2363-01A 6 2 Out-of-frame Intra-chr q24.11 Oncogene Tumor suppressor gene q24.3 Seq+ 97869 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEL1L-MIOS SEL1L chr14 81533675 - MIOS chr7 7585636 + Exonic hg38 OV TCGA-59-A5PD-01A 92 14 In-Frame Inter-chr q31.1 p21.3 Seq+ 97870 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D1-NMU TBC1D1 chr4 38054338 + NMU chr4 55600575 - Exonic hg38 OV TCGA-59-A5PD-01A 37 6 Out-of-frame Intra-chr p14 q12 Seq+ 97871 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLK1-ADK TLK1 chr2 171082781 - ADK chr10 74670183 + Exonic hg38 OV TCGA-59-A5PD-01A 18 18 Out-of-frame Inter-chr q31.1 Other:TLK q22.2 Seq+ 97872 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF3C-ADCY3 KIF3C chr2 25980373 - ADCY3 chr2 24872719 - Exonic hg38 OV TCGA-59-A5PD-01A 14 13 In-Frame Intra-chr p23.3 p23.3 Seq+ 97873 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAT1-SLCO1A2 BCAT1 chr12 24829823 - SLCO1A2 chr12 21334704 - Exonic hg38 OV TCGA-5X-AA5U-01A 37 10 CDS-5'UTR Intra-chr p12.1 p12.1 Seq+ 97874 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIPA1L3-ERC1 SIPA1L3 chr19 38088851 + ERC1 chr12 1083164 + Exonic hg38 OV TCGA-5X-AA5U-01A 26 4 In-Frame Inter-chr q13.13 Seq+ 97875 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGN-TMEM241 PIGN chr18 62161133 - TMEM241 chr18 23421444 - Exonic hg38 OV TCGA-5X-AA5U-01A 19 6 In-Frame Intra-chr q21.33 q11.2 Seq+ 97876 ChimerSeq TCGA FAWG TCGA_RNA-Seq BICD1-CYP2F2P BICD1 chr12 32107544 + CYP2F2P chr19 40818899 - Exonic hg38 OV TCGA-5X-AA5U-01A 18 0 Out-of-frame Inter-chr p11.21 q13.2 97877 ChimerSeq TCGA FAWG TCGA_RNA-Seq SARS2-SIPA1L3 SARS2 chr19 38926205 - SIPA1L3 chr19 38029089 + Exonic hg38 OV TCGA-5X-AA5U-01A 13 6 5'UTR-5'UTR Intra-chr q13.13 Seq+ 97878 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP54-MYOZ1 USP54 chr10 73571421 - MYOZ1 chr10 73637922 - Exonic hg38 OV TCGA-61-1724-01A 225 29 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 97879 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP3CC-SLC39A14 PPP3CC chr8 22475624 + SLC39A14 chr8 22404696 + Exonic hg38 OV TCGA-61-1724-01A 61 9 In-Frame Intra-chr p21.3 Tumor suppressor gene p21.3 Seq+ 97880 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC124-COL28A1 CCDC124 chr19 17936579 + COL28A1 chr7 7381612 - Exonic hg38 OV TCGA-61-1724-01A 55 7 In-Frame Inter-chr p13.11 p21.3 Seq+ 97881 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK1-NPS DOCK1 chr10 126981973 + NPS chr10 127552460 + Exonic hg38 OV TCGA-61-1724-01A 49 13 Out-of-frame Intra-chr q26.2 q26.2 Seq+ 97882 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGPAT4-CASC17 AGPAT4 chr6 161232036 - CASC17 chr17 71185655 - Exonic hg38 OV TCGA-61-1724-01A 25 3 CDS-3'UTR Inter-chr q26 q24.3 Seq+ 97883 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGPS1-GAPVD1 RALGPS1 chr9 127069356 + GAPVD1 chr9 125346819 + Exonic hg38 OV TCGA-61-1724-01A 23 4 In-Frame Intra-chr q33.3 q33.3 Seq+ 97884 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA3-ANO2 LAMA3 chr18 23714072 + ANO2 chr12 5532114 - Exonic hg38 OV TCGA-61-1724-01A 13 0 CDS-3'UTR Inter-chr q11.2 p13.31 Seq+ 97885 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO9A-PARP6 MYO9A chr15 71903929 - PARP6 chr15 72242699 - Exonic hg38 OV TCGA-61-1724-01A 11 4 Out-of-frame Intra-chr q23 q23 Seq+ 97886 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK13-POU6F2 CDK13 chr7 40002031 + POU6F2 chr7 39460547 + Exonic hg38 OV TCGA-61-1724-01A 8 4 In-Frame Intra-chr p14.1 p14.1 Tumor suppressor gene Transcription factor Seq+ 97887 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBXN4-R3HDM1 UBXN4 chr2 135769823 + R3HDM1 chr2 135602500 + Exonic hg38 OV TCGA-61-1724-01A 7 4 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 97888 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM7A-BRAF KDM7A chr7 140176744 - BRAF chr7 140726516 - Exonic hg38 OV TCGA-61-1724-01A 4 0 Out-of-frame Intra-chr q34 q34 TKL:RAF Oncogene 97889 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM87B-MERTK TMEM87B chr2 112064253 + MERTK chr2 112019413 + Exonic hg38 OV TCGA-61-1725-01A 22 0 In-Frame Intra-chr q13 q13 Seq+ 97890 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPNE2-FAM192A CPNE2 chr16 57092790 + FAM192A chr16 57164065 - Exonic hg38 OV TCGA-61-1728-01A 111 5 5'UTR-CDS Intra-chr q13 q13 Seq+ 97891 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAB2IP-SLC44A4 DAB2IP chr9 121770724 + SLC44A4 chr6 31869637 - Exonic hg38 OV TCGA-61-1728-01A 94 16 CDS-5'UTR Inter-chr q33.2 Tumor suppressor gene Seq+ 97892 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO9B-ZNF430 MYO9B chr19 17075874 + ZNF430 chr19 21056631 + Exonic hg38 OV TCGA-61-1728-01A 64 11 5'UTR-CDS Intra-chr p13.11 Transcription factor Seq+ 97893 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED26-SLC1A6 MED26 chr19 16627872 - SLC1A6 chr19 14972917 - Exonic hg38 OV TCGA-61-1728-01A 48 8 CDS-5'UTR Intra-chr p13.11 p13.12 Seq+ 97894 ChimerSeq TCGA FAWG TCGA_RNA-Seq AURKA-SOGA1 AURKA chr20 56381433 - SOGA1 chr20 36817469 - Exonic hg38 OV TCGA-61-1728-01A 45 5 In-Frame Intra-chr q13.2 Oncogene q11.23 Seq+ 97895 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYSTM1-MATR3 CYSTM1 chr5 140175285 + MATR3 chr5 139318908 + Exonic hg38 OV TCGA-61-1728-01A 20 13 5'UTR-CDS Intra-chr q31.3 q31.2 Seq+ 97896 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM29-CBL TRIM29 chr11 120118223 - CBL chr11 119313418 + Exonic hg38 OV TCGA-61-1728-01A 17 9 CDS-3'UTR Intra-chr q23.3 q23.3 Oncogene Tumor suppressor gene 97897 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFHX3-DLG2 ZFHX3 chr16 73058530 - DLG2 chr11 84534731 - Exonic hg38 OV TCGA-61-1728-01A 15 3 5'UTR-CDS Inter-chr q22.3 Tumor suppressor gene Transcription factor q14.1 Seq+ 97898 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHMT1-ATP13A1 EHMT1 chr9 137717182 + ATP13A1 chr19 19659987 - Exonic hg38 OV TCGA-61-1733-01A 18 1 In-Frame Inter-chr q34.3 p13.11 Seq+ 97899 ChimerSeq TCGA FAWG TCGA_RNA-Seq PELP1-CAMTA2 PELP1 chr17 4674510 - CAMTA2 chr17 4974500 - Exonic hg38 OV TCGA-61-1733-01A 17 0 In-Frame Intra-chr p13.2 p13.2 Transcription factor Seq+ 97900 ChimerSeq TCGA FAWG TCGA_RNA-Seq C10orf11-PLEKHG6 C10orf11 chr10 75438494 + PLEKHG6 chr12 6312159 + Exonic hg38 OV TCGA-61-1733-01A 13 0 Out-of-frame Inter-chr p13.31 97901 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSX2IP-LPAR3 SSX2IP chr1 84690154 - LPAR3 chr1 84814171 - Exonic hg38 OV TCGA-61-1736-01B 93 34 5'UTR-CDS Intra-chr p22.3 p22.3 Seq+ 97902 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMPSTE24-CAP1 ZMPSTE24 chr1 40272035 + CAP1 chr1 40069690 + Exonic hg38 OV TCGA-61-1736-01B 89 12 In-Frame Intra-chr p34.2 p34.2 Seq+ 97903 ChimerSeq TCGA FAWG TCGA_RNA-Seq YY1AP1-ARHGEF2 YY1AP1 chr1 155668627 - ARHGEF2 chr1 155969300 - Exonic hg38 OV TCGA-61-1736-01B 15 5 In-Frame Intra-chr q22 q22 Seq+ 97904 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB7-CDK12 GRB7 chr17 39738133 + CDK12 chr17 39564760 + Exonic hg38 OV TCGA-61-1736-01B 10 1 5'UTR-3'UTR Intra-chr q12 q12 Oncogene Seq+ 97905 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARD3-PARD6G PARD3 chr10 34696318 - PARD6G chr18 80202932 - Exonic hg38 OV TCGA-61-1737-01A 31 2 In-Frame Inter-chr p11.21 q23 97906 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2D2-PAIP2 UBE2D2 chr5 139526612 + PAIP2 chr5 139363759 + Exonic hg38 OV TCGA-61-1738-01A 538 69 5'UTR-5'UTR Intra-chr q31.2 q31.2 Tumor suppressor gene Seq+ 97907 ChimerSeq TCGA FAWG TCGA_RNA-Seq GDF15-MAST3 GDF15 chr19 18386466 + MAST3 chr19 18149191 + Exonic hg38 OV TCGA-61-1738-01A 95 16 In-Frame Intra-chr p13.11 p13.11 AGC:MAST Seq+ 97908 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-RBX1 NF1 chr17 31095369 + RBX1 chr22 40953555 + Exonic hg38 OV TCGA-61-1738-01A 94 17 In-Frame Inter-chr q11.2 Oncogene Tumor suppressor gene q13.2 Seq+ 97909 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA6-SLC10A1 NCOA6 chr20 34825472 - SLC10A1 chr14 69786307 - Exonic hg38 OV TCGA-61-1738-01A 75 14 5'UTR-CDS Inter-chr q11.22 q24.1 Seq+ 97910 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUMO2-POLR2K SUMO2 chr17 75182814 - POLR2K chr8 100151347 + Exonic hg38 OV TCGA-61-1738-01A 25 6 CDS-5'UTR Inter-chr q25.1 q22.2 Seq+ 97911 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHDC1-IFI6 AHDC1 chr1 27547261 - IFI6 chr1 27666475 - Exonic hg38 OV TCGA-61-1738-01A 25 0 3'UTR-CDS Intra-chr p35.3 Transcription factor p35.3 Seq+ 97912 ChimerSeq TCGA FAWG TCGA_RNA-Seq ISM2-SPTLC2 ISM2 chr14 77498653 - SPTLC2 chr14 77597380 - Exonic hg38 OV TCGA-61-1738-01A 18 6 In-Frame Intra-chr q24.3 q24.3 Seq+ 97913 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATSL2-GTF2IRD1 GATSL2 chr7 75020149 + GTF2IRD1 chr7 74555174 + Exonic hg38 OV TCGA-61-1738-01A 16 2 Out-of-frame Intra-chr q11.23 Transcription factor 97914 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM2-PDE4A DNM2 chr19 10718403 + PDE4A chr19 10446218 + Exonic hg38 OV TCGA-61-1738-01A 13 3 In-Frame Intra-chr p13.2 p13.2 Seq+ 97915 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOSL2-SNX17 FOSL2 chr2 28393822 + SNX17 chr2 27371269 + Exonic hg38 OV TCGA-61-1738-01A 13 3 In-Frame Intra-chr p23.2 Transcription factor p23.3 Seq+ 97916 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCSER2-GHITM CCSER2 chr10 84328808 + GHITM chr10 84150709 + Exonic hg38 OV TCGA-61-1738-01A 10 2 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 97917 ChimerSeq TCGA FAWG TCGA_RNA-Seq FHOD1-AS2 FHOD1 chr16 67239348 - AS2 chr1 9681135 - Exonic hg38 OV TCGA-61-1738-01A 9 6 Out-of-frame Inter-chr q22.1 97918 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTCF-SPSB1 CTCF chr16 67621591 + SPSB1 chr1 9355743 + Exonic hg38 OV TCGA-61-1738-01A 9 5 CDS-5'UTR Inter-chr q22.1 Tumor suppressor gene Transcription factor p36.22 Seq+ 97919 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC7-ACHE EXOC7 chr17 76087654 - ACHE chr7 100894255 - Exonic hg38 OV TCGA-61-1738-01A 6 2 In-Frame Inter-chr q25.1 q22.1 Tumor suppressor gene Seq+ 97920 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCC3-KAT7 ABCC3 chr17 50634981 + KAT7 chr17 49815803 + Exonic hg38 OV TCGA-61-1738-01A 4 4 In-Frame Intra-chr q21.33 q21.33 Transcription factor Seq+ 97921 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPR1-AHNAK XPR1 chr1 180632270 + AHNAK chr11 62491831 - Exonic hg38 OV TCGA-61-1740-01A 492 107 In-Frame Inter-chr q25.3 q12.3 Tumor suppressor gene Seq+ 97922 ChimerSeq TCGA FAWG TCGA_RNA-Seq FDXACB1-CRYAB FDXACB1 chr11 111878961 - CRYAB chr11 111911922 - Exonic hg38 OV TCGA-61-1740-01A 89 35 CDS-5'UTR Intra-chr q23.1 q23.1 Seq+ 97923 ChimerSeq TCGA FAWG TCGA_RNA-Seq C11orf52-C11orf1 C11orf52 chr11 111919004 + C11orf1 chr11 111882368 + Exonic hg38 OV TCGA-61-1740-01A 50 7 Out-of-frame Intra-chr q23.1 q23.1 97924 ChimerSeq TCGA FAWG TCGA_RNA-Seq YME1L1-ZNF438 YME1L1 chr10 27148906 - ZNF438 chr10 30909015 - Exonic hg38 OV TCGA-61-1740-01A 31 16 CDS-5'UTR Intra-chr p12.1 p11.23 Transcription factor Seq+ 97925 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFXN5-M1AP SFXN5 chr2 72998949 - M1AP chr2 74562423 - Exonic hg38 OV TCGA-61-1740-01A 27 7 In-Frame Intra-chr p13.2 p13.1 Seq+ 97926 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKD2-HPSE2 PRKD2 chr19 46678396 - HPSE2 chr10 98490196 - Exonic hg38 OV TCGA-61-1740-01A 22 6 Out-of-frame Inter-chr q13.32 q24.2 Seq+ 97927 ChimerSeq TCGA FAWG TCGA_RNA-Seq EML2-FBXO46 EML2 chr19 45617630 - FBXO46 chr19 45713573 - Exonic hg38 OV TCGA-61-1740-01A 15 7 CDS-5'UTR Intra-chr q13.32 q13.32 Seq+ 97928 ChimerSeq TCGA FAWG TCGA_RNA-Seq EP300-CARD8 EP300 chr22 41093098 + CARD8 chr19 48215384 - Exonic hg38 OV TCGA-61-1740-01A 12 5 In-Frame Inter-chr q13.2 Oncogene q13.33 Seq+ 97929 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPP5-SRGAP2 MPP5 chr14 67241533 + SRGAP2 chr1 206450386 + Exonic hg38 OV TCGA-61-1740-01A 10 8 5'UTR-CDS Inter-chr q23.3 q32.1 Tumor suppressor gene Seq+ 97930 ChimerSeq TCGA FAWG TCGA_RNA-Seq USF2-P3H2 USF2 chr19 35271141 + P3H2 chr3 189995442 - Exonic hg38 OV TCGA-61-1741-01A 12 2 Out-of-frame Inter-chr q13.12 Transcription factor q28 97931 ChimerSeq TCGA FAWG TCGA_RNA-Seq UQCC1-MMP24 UQCC1 chr20 35306666 - MMP24 chr20 35246840 + Exonic hg38 OV TCGA-61-1741-01A 9 3 In-Frame Intra-chr q11.22 q11.22 Seq+ 97932 ChimerSeq TCGA FAWG TCGA_RNA-Seq VCL-ZSWIM8 VCL chr10 73998375 + ZSWIM8 chr10 73793588 + Exonic hg38 OV TCGA-61-1743-01A 38 2 In-Frame Intra-chr q22.2 q22.2 Seq+ 97933 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPEG-MIRLET7BHG SPEG chr2 219464608 + MIRLET7BHG chr22 46097926 + Exonic hg38 OV TCGA-61-1743-01A 20 5 CDS-5'UTR Inter-chr q35 CAMK:Trio q13.31 Seq+ 97934 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASGRP1-TBC1D3G RASGRP1 chr15 38559821 - TBC1D3G chr17 36325411 + Exonic hg38 OV TCGA-61-1743-01A 15 4 CDS-5'UTR Inter-chr q14 q12 97935 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D10A-OSBP2 TBC1D10A chr22 30326673 - OSBP2 chr22 30870429 + Exonic hg38 OV TCGA-61-1743-01A 12 5 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 97936 ChimerSeq TCGA FAWG TCGA_RNA-Seq NMRAL1-PRKCB NMRAL1 chr16 4466153 - PRKCB chr16 24219961 + Exonic hg38 OV TCGA-61-1907-01A 16 6 5'UTR-CDS Intra-chr p13.3 p12.2 Tumor suppressor gene Seq+ 97937 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC7-GHDC DNAJC7 chr17 42017340 - GHDC chr17 42193850 - Exonic hg38 OV TCGA-61-1910-01A 44 2 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 97938 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNC3-NAPSA KCNC3 chr19 50328213 - NAPSA chr19 50362313 - Exonic hg38 OV TCGA-61-1910-01A 23 3 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 97939 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSPL2-CASC4 CTDSPL2 chr15 44459200 + CASC4 chr15 44413336 + Exonic hg38 OV TCGA-61-1910-01A 22 1 Out-of-frame Intra-chr q15.3 q15.3 Seq+ 97940 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAT1-HCG20 ATAT1 chr6 30628430 + HCG20 chr6 30788691 + Exonic hg38 OV TCGA-61-1910-01A 11 0 3'UTR-3'UTR Intra-chr Seq+ 97941 ChimerSeq TCGA FAWG TCGA_RNA-Seq CIITA-FCHSD2 CIITA chr16 10902801 + FCHSD2 chr11 72921950 - Exonic hg38 OV TCGA-61-1910-01A 7 2 Out-of-frame Inter-chr p13.13 q13.4 Seq+ 97942 ChimerSeq TCGA FAWG TCGA_RNA-Seq MROH1-PPM1E MROH1 chr8 144168440 + PPM1E chr17 58955649 + Exonic hg38 OV TCGA-61-1910-01A 6 1 Out-of-frame Inter-chr q24.3 q22 Seq+ 97943 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENDOV-RNF213 ENDOV chr17 80429831 + RNF213 chr17 80388612 + Exonic hg38 OV TCGA-61-1910-01A 5 0 Out-of-frame Intra-chr q25.3 q25.3 Oncogene Seq+ 97944 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHRS13-PHF12 DHRS13 chr17 28902583 - PHF12 chr17 28914037 - Exonic hg38 OV TCGA-61-1910-01A 3 2 In-Frame Intra-chr q11.2 q11.2 Seq+ 97945 ChimerSeq TCGA FAWG TCGA_RNA-Seq MECOM-LRRC31 MECOM chr3 169663336 - LRRC31 chr3 169869872 - Exonic hg38 OV TCGA-61-1911-01A 6 0 5'UTR-5'UTR Intra-chr q26.2 Transcription factor q26.2 Seq+ 97946 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSFL1C-EPSTI1 NSFL1C chr20 1454967 - EPSTI1 chr13 42954021 - Exonic hg38 OV TCGA-61-1911-01A 4 0 In-Frame Inter-chr p13 q14.11 Seq+ 97947 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2K4-MYH3 MAP2K4 chr17 12021001 + MYH3 chr17 10635853 - Exonic hg38 OV TCGA-61-1914-01A 69 13 In-Frame Intra-chr p12 STE:STE7 Oncogene Tumor suppressor gene p13.1 Seq+ 97948 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMC6-TK1 TMC6 chr17 78128612 - TK1 chr17 78175618 - Exonic hg38 OV TCGA-61-1917-01A 101 12 5'UTR-CDS Intra-chr q25.3 q25.3 Seq+ 97949 ChimerSeq TCGA FAWG TCGA_RNA-Seq SF1-MAJIN SF1 chr11 64773430 - MAJIN chr11 64938573 - Exonic hg38 OV TCGA-61-1917-01A 97 15 In-Frame Intra-chr q13.1 q13.1 97950 ChimerSeq TCGA FAWG TCGA_RNA-Seq TET3-ACTG2 TET3 chr2 74003166 + ACTG2 chr2 73901276 + Exonic hg38 OV TCGA-61-1917-01A 68 8 CDS-5'UTR Intra-chr p13.1 Transcription factor p13.1 Seq+ 97951 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGPAT3-SOAT2 AGPAT3 chr21 43904019 + SOAT2 chr12 53116097 + Exonic hg38 OV TCGA-61-1917-01A 57 3 5'UTR-CDS Inter-chr q22.3 q13.13 Seq+ 97952 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB10-CSTF3 GRB10 chr7 50703821 - CSTF3 chr11 33087141 - Exonic hg38 OV TCGA-61-1917-01A 55 6 5'UTR-5'UTR Inter-chr p12.1 p13 Seq+ 97953 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF185-INPP5J RNF185 chr22 31160303 + INPP5J chr22 31133098 + Exonic hg38 OV TCGA-61-1917-01A 44 14 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 97954 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPNS1-TBCB CAPNS1 chr19 36140582 + TBCB chr19 36115052 + Exonic hg38 OV TCGA-61-1917-01A 24 2 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 97955 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEMIP-LRRC49 CEMIP chr15 80932039 + LRRC49 chr15 70936761 + Exonic hg38 OV TCGA-61-1917-01A 24 1 In-Frame Intra-chr q25.1 q23 97956 ChimerSeq TCGA FAWG TCGA_RNA-Seq MECOM-SLC7A14 MECOM chr3 169663336 - SLC7A14 chr3 170501345 - Exonic hg38 OV TCGA-61-1917-01A 14 0 In-Frame Intra-chr q26.2 Transcription factor q26.2 Seq+ 97957 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP13-INTS14 AKAP13 chr15 85380798 + INTS14 chr15 65584888 - Exonic hg38 OV TCGA-61-1917-01A 13 2 5'UTR-CDS Intra-chr q25.3 q22.31 97958 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2Q2-ABHD17C UBE2Q2 chr15 75843846 + ABHD17C chr15 80749513 + Exonic hg38 OV TCGA-61-1917-01A 12 3 Out-of-frame Intra-chr q24.2 q25.1 Seq+ 97959 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK2-C11orf84 MARK2 chr11 63839560 + C11orf84 chr11 63826928 + Exonic hg38 OV TCGA-61-1917-01A 9 1 Out-of-frame Intra-chr q13.1 CAMK:CAMKL q13.1 Seq+ 97960 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP2-MAPKAPK2 SRGAP2 chr1 206206037 + MAPKAPK2 chr1 206731138 + Exonic hg38 OV TCGA-61-1917-01A 9 0 Out-of-frame Intra-chr q32.1 Tumor suppressor gene q32.1 CAMK:MAPKAPK 97961 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2C-GALNTL5 KMT2C chr7 152435626 - GALNTL5 chr7 152002714 + Exonic hg38 OV TCGA-61-1917-01A 7 5 Out-of-frame Intra-chr q36.1 Oncogene Tumor suppressor gene q36.1 Seq+ 97962 ChimerSeq TCGA FAWG TCGA_RNA-Seq LATS1-NUP43 LATS1 chr6 149701779 - NUP43 chr6 149727198 - Exonic hg38 OV TCGA-61-1917-01A 2 1 Out-of-frame Intra-chr q25.1 AGC:NDR Tumor suppressor gene q25.1 Seq+ 97963 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANP32E-CTSK ANP32E chr1 150230571 - CTSK chr1 150796898 - Exonic hg38 OV TCGA-61-1918-01A 44 9 Out-of-frame Intra-chr q21.2 q21.3 Seq+ 97964 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX27-CDKN3 SNX27 chr1 151612512 + CDKN3 chr14 54415899 + Exonic hg38 OV TCGA-61-1918-01A 28 11 In-Frame Inter-chr q21.3 q22.2 Seq+ 97965 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPSF7-BSCL2 CPSF7 chr11 61429182 - BSCL2 chr11 62702549 - Exonic hg38 OV TCGA-61-1918-01A 24 2 Out-of-frame Intra-chr q12.2 q12.3 Seq+ 97966 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASZ1-FBXO2 CASZ1 chr1 10705492 - FBXO2 chr1 11650834 - Exonic hg38 OV TCGA-61-1918-01A 19 7 5'UTR-CDS Intra-chr p36.22 Transcription factor p36.22 Seq+ 97967 ChimerSeq TCGA FAWG TCGA_RNA-Seq NBPF19-UBE2Q1 NBPF19 chr1 149390922 + UBE2Q1 chr1 154555964 - Exonic hg38 OV TCGA-61-1918-01A 18 0 5'UTR-CDS Intra-chr q21.2 q21.3 97968 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRADD-MRPL42 CRADD chr12 93679072 + MRPL42 chr12 93501176 + Exonic hg38 OV TCGA-61-1918-01A 13 3 Out-of-frame Intra-chr q22 q22 Seq+ 97969 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF7L2-EIF3D TCF7L2 chr10 113040126 + EIF3D chr22 36526131 - Exonic hg38 OV TCGA-61-1918-01A 8 0 CDS-5'UTR Inter-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q12.3 Seq+ 97970 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUDT19-LSM14A NUDT19 chr19 32692674 + LSM14A chr19 34194478 + Exonic hg38 OV TCGA-61-1918-01A 7 1 CDS-3'UTR Intra-chr q13.11 Seq+ 97971 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOXO1-ECI1 NOXO1 chr16 1979246 - ECI1 chr16 2246986 - Exonic hg38 OV TCGA-61-1918-01A 6 2 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 97972 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0319L-TPMT KIAA0319L chr1 35554350 - TPMT chr6 18149171 - Exonic hg38 OV TCGA-61-1918-01A 4 4 CDS-5'UTR Inter-chr p34.3 p22.3 Seq+ 97973 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC102A-CNGB1 CCDC102A chr16 57536500 - CNGB1 chr16 57955368 - Exonic hg38 OV TCGA-61-1918-01A 3 6 5'UTR-CDS Intra-chr q21 q21 Seq+ 97974 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK3-GLIS3 MARK3 chr14 103428440 + GLIS3 chr9 3856184 - Exonic hg38 OV TCGA-61-1919-01A 18 0 Out-of-frame Inter-chr q32.32 CAMK:CAMKL p24.2 Transcription factor Seq+ 97975 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H12C-VPS52 ZC3H12C chr11 110137414 + VPS52 chr6 33264900 - Exonic hg38 OV TCGA-61-1919-01A 6 1 CDS-5'UTR Inter-chr q22.3 Seq+ 97976 ChimerSeq TCGA FAWG TCGA_RNA-Seq CARD19-TMOD1 CARD19 chr9 93107827 + TMOD1 chr9 97524141 + Exonic hg38 OV TCGA-61-1998-01A 14 2 5'UTR-5'UTR Intra-chr q22.31 q22.33 97977 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNK2-SH2B2 WNK2 chr9 93247834 + SH2B2 chr7 102314336 + Exonic hg38 OV TCGA-61-1998-01A 11 1 Out-of-frame Inter-chr q22.31 Tumor suppressor gene q22.1 97978 ChimerSeq TCGA FAWG TCGA_RNA-Seq JKAMP-DAAM1 JKAMP chr14 59486804 + DAAM1 chr14 59340074 + Exonic hg38 OV TCGA-61-1998-01A 10 1 In-Frame Intra-chr q23.1 q23.1 Seq+ 97979 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC1A3-FYB SLC1A3 chr5 36608604 + FYB chr5 39110389 - Exonic hg38 OV TCGA-61-1998-01A 8 0 Out-of-frame Intra-chr p13.2 p13.1 Seq+ 97980 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA7-SERGEF PLEKHA7 chr11 17013989 - SERGEF chr11 17788413 - Exonic hg38 OV TCGA-61-2000-01A 62 9 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 97981 ChimerSeq TCGA FAWG TCGA_RNA-Seq FKBP8-MEF2B FKBP8 chr19 18538216 - MEF2B chr19 19147832 - Exonic hg38 OV TCGA-61-2000-01A 38 4 Out-of-frame Intra-chr p13.11 p13.11 Transcription factor Seq+ 97982 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXO1-WDR64 EXO1 chr1 241850586 + WDR64 chr1 241787849 + Exonic hg38 OV TCGA-61-2000-01A 32 0 In-Frame Intra-chr q43 q43 Seq+ 97983 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF135-RAB11FIP4 RNF135 chr17 30971445 + RAB11FIP4 chr17 31517651 + Exonic hg38 OV TCGA-61-2000-01A 27 3 In-Frame Intra-chr q11.2 q11.2 Seq+ 97984 ChimerSeq TCGA FAWG TCGA_RNA-Seq BIRC6-BRE BIRC6 chr2 32357486 + BRE chr2 28129271 + Exonic hg38 OV TCGA-61-2000-01A 17 3 Out-of-frame Intra-chr p22.3 Seq+ 97985 ChimerSeq TCGA FAWG TCGA_RNA-Seq HBP1-LHFPL3 HBP1 chr7 107169027 + LHFPL3 chr7 104736675 + Exonic hg38 OV TCGA-61-2000-01A 10 1 3'UTR-CDS Intra-chr Tumor suppressor gene Transcription factor q22.2 Seq+ 97986 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYL9-AAR2 MYL9 chr20 36545068 + AAR2 chr20 36270533 + Exonic hg38 OV TCGA-61-2002-01A 62 21 CDS-3'UTR Intra-chr q11.23 q11.23 Seq+ 97987 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMCR8-ALKBH5 SMCR8 chr17 18323033 + ALKBH5 chr17 18206815 + Exonic hg38 OV TCGA-61-2002-01A 27 5 3'UTR-CDS Intra-chr p11.2 Seq+ 97988 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF772-CYP4F2 ZNF772 chr19 57476634 - CYP4F2 chr19 15892582 - Exonic hg38 OV TCGA-61-2003-01A 10 0 5'UTR-5'UTR Intra-chr q13.43 Transcription factor p13.12 Seq+ 97989 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMIZ1-PXYLP1 ZMIZ1 chr10 79216274 + PXYLP1 chr3 141260123 + Exonic hg38 OV TCGA-61-2003-01A 8 3 CDS-5'UTR Inter-chr q22.3 q23 97990 ChimerSeq TCGA FAWG TCGA_RNA-Seq GORASP2-GAD1 GORASP2 chr2 170948430 + GAD1 chr2 170847676 + Exonic hg38 OV TCGA-61-2009-01A 102 8 In-Frame Intra-chr q31.1 q31.1 Seq+ 97991 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBA2-ZNF536 UBA2 chr19 34450364 + ZNF536 chr19 30710757 + Exonic hg38 OV TCGA-61-2012-01A 24 7 CDS-3'UTR Intra-chr q13.11 q12 Transcription factor Seq+ 97992 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM1-ADGRB2 PUM1 chr1 31059204 - ADGRB2 chr1 31756815 - Exonic hg38 OV TCGA-61-2012-01A 11 2 In-Frame Intra-chr p35.2 p35.2 97993 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAFAH1B1-VPS53 PAFAH1B1 chr17 2638320 + VPS53 chr17 601896 - Exonic hg38 OV TCGA-61-2012-01A 8 1 CDS-5'UTR Intra-chr p13.3 Tumor suppressor gene Tumor suppressor gene Seq+ 97994 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRMT1-CCDC155 PRMT1 chr19 49682259 + CCDC155 chr19 49406886 + Exonic hg38 OV TCGA-61-2012-01A 8 0 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 97995 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK1-ZNF595 PAK1 chr11 77473552 - ZNF595 chr4 59430 + Exonic hg38 OV TCGA-61-2012-01A 6 3 5'UTR-5'UTR Inter-chr q14.1 STE:STE20 p16.3 Transcription factor Seq+ 97996 ChimerSeq TCGA FAWG TCGA_RNA-Seq FXR1-ST6GAL1 FXR1 chr3 180912736 + ST6GAL1 chr3 187038742 + Exonic hg38 OV TCGA-61-2016-01A 32 0 5'UTR-5'UTR Intra-chr q26.33 q27.3 Seq+ 97997 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD9-SUPT3H BTBD9 chr6 38577600 - SUPT3H chr6 44829857 - Exonic hg38 OV TCGA-61-2088-01A 27 2 Out-of-frame Intra-chr p21.2 p21.1 Seq+ 97998 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUDT3-MOCS1 NUDT3 chr6 34341862 - MOCS1 chr6 39916232 - Exonic hg38 OV TCGA-61-2088-01A 24 3 Out-of-frame Intra-chr p21.31 p21.2 Seq+ 97999 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLX4IP-DEFB126 SLX4IP chr20 10458231 + DEFB126 chr20 145415 + Exonic hg38 OV TCGA-61-2088-01A 20 6 Out-of-frame Intra-chr p12.2 p13 Seq+ 98000 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNASE2-GADD45GIP1 DNASE2 chr19 12878382 - GADD45GIP1 chr19 12954526 - Exonic hg38 OV TCGA-61-2088-01A 12 0 Out-of-frame Intra-chr p13.13 p13.13 Tumor suppressor gene Seq+ 98001 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED24-TMED10 MED24 chr17 40053298 - TMED10 chr14 75135886 - Exonic hg38 OV TCGA-61-2092-01A 97 35 In-Frame Inter-chr q21.1 q24.3 Seq+ 98002 ChimerSeq TCGA FAWG TCGA_RNA-Seq RC3H2-NRF1 RC3H2 chr9 122892909 - NRF1 chr7 129630078 + Exonic hg38 OV TCGA-61-2092-01A 93 22 CDS-5'UTR Inter-chr q33.2 q32.2 Tumor suppressor gene Transcription factor Seq+ 98003 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF5-NOXRED1 DCAF5 chr14 69062384 - NOXRED1 chr14 77394805 - Exonic hg38 OV TCGA-61-2092-01A 67 27 Out-of-frame Intra-chr q24.1 q24.3 Seq+ 98004 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFA13-NCAN NDUFA13 chr19 19526260 + NCAN chr19 19226486 + Exonic hg38 OV TCGA-61-2092-01A 16 3 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 98005 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM2-SBNO2 DNM2 chr19 10759811 + SBNO2 chr19 1149442 - Exonic hg38 OV TCGA-61-2092-01A 16 2 CDS-5'UTR Intra-chr p13.2 p13.3 Seq+ 98006 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYTH3-ATP8B3 CYTH3 chr7 6272474 - ATP8B3 chr19 1802645 - Exonic hg38 OV TCGA-61-2092-01A 11 2 In-Frame Inter-chr p22.1 p13.3 Seq+ 98007 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBFOX2-TEX33 RBFOX2 chr22 35809780 - TEX33 chr22 37004025 - Exonic hg38 OV TCGA-61-2092-01A 11 1 5'UTR-5'UTR Intra-chr q12.3 Seq+ 98008 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERC2-ARHGEF3 ERC2 chr3 56468248 - ARHGEF3 chr3 56958889 - Exonic hg38 OV TCGA-61-2092-01A 9 2 5'UTR-CDS Intra-chr p14.3 p14.3 Seq+ 98009 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53BP2-GRHL2 TP53BP2 chr1 223814240 - GRHL2 chr8 101619539 + Exonic hg38 OV TCGA-61-2092-01A 9 2 Out-of-frame Inter-chr q41 Tumor suppressor gene q22.3 Transcription factor Seq+ 98010 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLPX-PARP16 CLPX chr15 65148548 - PARP16 chr15 65259397 - Exonic hg38 OV TCGA-61-2092-01A 8 1 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 98011 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBMS2-ERBB3 RBMS2 chr12 56522089 + ERBB3 chr12 56083751 + Exonic hg38 OV TCGA-61-2092-01A 7 4 Out-of-frame Intra-chr q13.3 q13.2 Oncogene Seq+ 98012 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-IKZF3 FBXL20 chr17 39343180 - IKZF3 chr17 39788374 - Exonic hg38 OV TCGA-61-2092-01A 7 1 Out-of-frame Intra-chr q12 q21.1 Tumor suppressor gene Transcription factor Seq+ 98013 ChimerSeq TCGA FAWG TCGA_RNA-Seq SORL1-TBCEL SORL1 chr11 121478243 + TBCEL chr11 121086778 + Exonic hg38 OV TCGA-61-2094-01A 66 14 Out-of-frame Intra-chr q24.1 q23.3 Seq+ 98014 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM98C-SPINT2 FAM98C chr19 38403694 + SPINT2 chr19 38283627 + Exonic hg38 OV TCGA-61-2094-01A 18 5 In-Frame Intra-chr q13.2 q13.2 Tumor suppressor gene 98015 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAAP1-TNNI3K CAAP1 chr9 26861066 - TNNI3K chr1 74367256 + Exonic hg38 OV TCGA-61-2095-01A 39 3 In-Frame Inter-chr p21.2 p31.1 Seq+ 98016 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRYZ-VPS13D CRYZ chr1 74719209 - VPS13D chr1 12415087 + Exonic hg38 OV TCGA-61-2095-01A 21 1 Out-of-frame Intra-chr p31.1 p36.22 Seq+ 98017 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF20-TOX2 PHF20 chr20 35847434 + TOX2 chr20 44051306 + Exonic hg38 OV TCGA-61-2098-01A 66 10 Out-of-frame Intra-chr q11.22 Transcription factor q13.12 Seq+ 98018 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITPR2-BHLHE41 ITPR2 chr12 26790157 - BHLHE41 chr12 26124582 - Exonic hg38 OV TCGA-61-2098-01A 26 8 Out-of-frame Intra-chr p11.23 p12.1 Tumor suppressor gene Transcription factor Seq+ 98019 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4K5-SOS2 MAP4K5 chr14 50531942 - SOS2 chr14 50161609 - Exonic hg38 OV TCGA-61-2098-01A 21 3 In-Frame Intra-chr q22.1 q21.3 Seq+ 98020 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYRK1A-PHF6 DYRK1A chr21 37367628 + PHF6 chrX 134377572 + Exonic hg38 OV TCGA-61-2101-01A 34 11 5'UTR-5'UTR Inter-chr q22.13 CMGC:DYRK q26.2 Oncogene Tumor suppressor gene Seq+ 98021 ChimerSeq TCGA FAWG TCGA_RNA-Seq EWSR1-SMTN EWSR1 chr22 29278216 + SMTN chr22 31080450 + Exonic hg38 OV TCGA-61-2101-01A 27 2 CDS-5'UTR Intra-chr q12.2 q12.2 Seq+ 98022 ChimerSeq TCGA FAWG TCGA_RNA-Seq LARGE1-CBX7 LARGE1 chr22 33761371 - CBX7 chr22 39149832 - Exonic hg38 OV TCGA-61-2101-01A 11 9 Out-of-frame Intra-chr q12.3 q13.1 98023 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBFOX2-SELENOM RBFOX2 chr22 35938847 - SELENOM chr22 31119946 - Exonic hg38 OV TCGA-61-2101-01A 10 5 5'UTR-5'UTR Intra-chr q12.2 98024 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS8-PLEKHA5 EPS8 chr12 15789161 - PLEKHA5 chr12 19336515 + Exonic hg38 OV TCGA-61-2102-01A 217 59 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 98025 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO9B-ATP13A1 MYO9B chr19 17102557 + ATP13A1 chr19 19647528 - Exonic hg38 OV TCGA-61-2102-01A 20 18 In-Frame Intra-chr p13.11 p13.11 Seq+ 98026 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBRSL1-GALNT9 FBRSL1 chr12 132490861 + GALNT9 chr12 132286430 - Exonic hg38 OV TCGA-61-2102-01A 12 6 Out-of-frame Intra-chr q24.33 q24.33 Seq+ 98027 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM135A-LMO3 FAM135A chr6 70502791 + LMO3 chr12 16560538 - Exonic hg38 OV TCGA-61-2102-01A 11 5 Out-of-frame Inter-chr q13 p12.3 Seq+ 98028 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS41-VOPP1 VPS41 chr7 38862545 - VOPP1 chr7 55497690 - Exonic hg38 OV TCGA-61-2102-01A 10 4 In-Frame Intra-chr p14.1 p11.2 Seq+ 98029 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA5-SLCO1B1 PLEKHA5 chr12 19132450 + SLCO1B1 chr12 21172650 + Exonic hg38 OV TCGA-61-2102-01A 5 5 Out-of-frame Intra-chr p12.3 p12.1 Seq+ 98030 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOOK1-FGGY HOOK1 chr1 59835412 + FGGY chr1 59607803 + Exonic hg38 OV TCGA-61-2102-01A 5 1 In-Frame Intra-chr p32.1 p32.1 Seq+ 98031 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPEN-TMEM51 SPEN chr1 15876678 + TMEM51 chr1 15210490 + Exonic hg38 OV TCGA-61-2104-01A 20 16 CDS-5'UTR Intra-chr p36.21 Transcription factor p36.21 Seq+ 98032 ChimerSeq TCGA FAWG TCGA_RNA-Seq THRAP3-INSL5 THRAP3 chr1 36224505 + INSL5 chr1 66801166 - Exonic hg38 OV TCGA-61-2104-01A 17 5 5'UTR-CDS Intra-chr p34.3 p31.3 Seq+ 98033 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACROD1-TBC1D22A MACROD1 chr11 64151239 - TBC1D22A chr22 46878653 + Exonic hg38 OV TCGA-61-2104-01A 14 3 In-Frame Inter-chr q13.1 q13.31 Seq+ 98034 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBCD-FN3K TBCD chr17 82752328 + FN3K chr17 82740842 + Exonic hg38 OV TCGA-61-2104-01A 11 2 Out-of-frame Intra-chr q25.3 Seq+ 98035 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO31-TTC28 FBXO31 chr16 87360295 - TTC28 chr22 28163599 - Exonic hg38 OV TCGA-61-2104-01A 9 4 Out-of-frame Inter-chr q24.2 Tumor suppressor gene q12.1 Seq+ 98036 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGSM3-PLAUR SGSM3 chr22 40370688 + PLAUR chr19 43656640 - Exonic hg38 OV TCGA-61-2104-01A 10 0 5'UTR-CDS Inter-chr q13.1 q13.31 Seq+ 98037 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM69A-TGFBR3 FAM69A chr1 92961376 - TGFBR3 chr1 91899697 - Exonic hg38 OV TCGA-61-2104-01A 9 1 Out-of-frame Intra-chr p22.1 p22.1 Tumor suppressor gene 98038 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBAP2-C15orf41 UBAP2 chr9 33923186 - C15orf41 chr15 36808324 + Exonic hg38 OV TCGA-61-2109-01A 18 8 In-Frame Inter-chr p13.3 q14 Seq+ 98039 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOP3B-MAPK1 TOP3B chr22 21974357 - MAPK1 chr22 21807846 - Exonic hg38 OV TCGA-61-2109-01A 13 3 Out-of-frame Intra-chr q11.22 q11.22 Oncogene Seq+ 98040 ChimerSeq TCGA FAWG TCGA_RNA-Seq AXIN1-BBX AXIN1 chr16 346148 - BBX chr3 107747965 + Exonic hg38 OV TCGA-61-2109-01A 11 6 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene q13.12 Transcription factor Seq+ 98041 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13C-ENKD1 VPS13C chr15 61929501 - ENKD1 chr16 67664062 - Exonic hg38 OV TCGA-61-2109-01A 6 5 Out-of-frame Inter-chr q22.2 q22.1 Seq+ 98042 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAG1-ZNF148 STAG1 chr3 136752195 - ZNF148 chr3 125234329 - Exonic hg38 OV TCGA-61-2110-01A 14 0 5'UTR-CDS Intra-chr q22.3 q21.2 Transcription factor Seq+ 98043 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPD-MYL4 CPD chr17 30385236 + MYL4 chr17 47209389 + Exonic hg38 OV TCGA-61-2111-01A 40 9 5'UTR-5'UTR Intra-chr q11.2 Tumor suppressor gene q21.32 Seq+ 98044 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H7B-SLC9A8 ZC3H7B chr22 41346208 + SLC9A8 chr20 49887829 + Exonic hg38 OV TCGA-61-2111-01A 38 10 In-Frame Inter-chr q13.2 q13.13 Seq+ 98045 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADSL-PVALB ADSL chr22 40346711 + PVALB chr22 36800918 - Exonic hg38 OV TCGA-61-2111-01A 35 9 5'UTR-5'UTR Intra-chr q13.1 Seq+ 98046 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRF-PHF20 PTPRF chr1 43578920 + PHF20 chr20 35899370 + Exonic hg38 OV TCGA-61-2111-01A 19 7 In-Frame Inter-chr p34.2 q11.22 Transcription factor Seq+ 98047 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMDHD2-COG7 AMDHD2 chr16 2521123 + COG7 chr16 23398129 - Exonic hg38 OV TCGA-61-2111-01A 10 3 In-Frame Intra-chr p13.3 p12.2 Seq+ 98048 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM170B-ADTRP TMEM170B chr6 11538374 + ADTRP chr6 11723500 - Exonic hg38 OV TCGA-61-2111-01A 10 2 Out-of-frame Intra-chr p24.2 p24.1 Seq+ 98049 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBL1-CSTA RBL1 chr20 37088989 - CSTA chr3 122337547 + Exonic hg38 OV TCGA-61-2111-01A 10 0 Out-of-frame Inter-chr q11.23 Tumor suppressor gene q21.1 Seq+ 98050 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSBP3-TOX2 SSBP3 chr1 54401861 - TOX2 chr20 44051306 + Exonic hg38 OV TCGA-61-2111-01A 8 3 In-Frame Inter-chr p32.3 q13.12 Seq+ 98051 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNN-LITAF SNN chr16 11668540 + LITAF chr16 11556735 - Exonic hg38 OV TCGA-61-2111-01A 7 6 5'UTR-5'UTR Intra-chr p13.13 p13.13 Tumor suppressor gene Seq+ 98052 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGF2BP3-P2RY14 IGF2BP3 chr7 23317639 - P2RY14 chr3 151219642 - Exonic hg38 OV TCGA-61-2111-01A 6 1 CDS-5'UTR Inter-chr p15.3 q25.1 Seq+ 98053 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKDCC-CXXC5 PKDCC chr2 42057397 + CXXC5 chr5 139682880 + Exonic hg38 OV TCGA-61-2111-01A 5 4 Out-of-frame Inter-chr p21 q31.2 Tumor suppressor gene Transcription factor 98054 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTR3-POLR1B ACTR3 chr2 113890323 + POLR1B chr2 112559293 + Exonic hg38 OV TCGA-61-2111-01A 5 3 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 98055 ChimerSeq TCGA FAWG TCGA_RNA-Seq FARP1-ABCC2 FARP1 chr13 98143492 + ABCC2 chr10 99807384 + Exonic hg38 OV TCGA-61-2111-01A 5 2 5'UTR-CDS Inter-chr q32.2 q24.2 98056 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRHL2-FLJ42969 GRHL2 chr8 101649499 + FLJ42969 chr8 101054498 + Exonic hg38 OV TCGA-61-2111-01A 4 6 CDS-5'UTR Intra-chr q22.3 Transcription factor q22.3 98057 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBWD1-INSL6 CBWD1 chr9 175698 - INSL6 chr9 5164265 - Exonic hg38 OV TCGA-61-2111-01A 5 1 In-Frame Intra-chr p24.3 p24.1 Seq+ 98058 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRA2B-NMRAL2P TRA2B chr3 185937825 - NMRAL2P chr3 185971615 + Exonic hg38 OV TCGA-61-2111-01A 5 1 5'UTR-5'UTR Intra-chr q27.2 q27.2 98059 ChimerSeq TCGA FAWG TCGA_RNA-Seq HECTD4-ZRSR1 HECTD4 chr12 112265175 - ZRSR1 chr5 112891603 + Exonic hg38 OV TCGA-61-2111-01A 4 2 Out-of-frame Inter-chr q24.13 q22.2 Seq+ 98060 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC6B-MKL1 TNRC6B chr22 40178140 + MKL1 chr22 40594735 - Exonic hg38 OV TCGA-61-2113-01A 9 4 Out-of-frame Intra-chr q13.1 q13.2 Seq+ 98061 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPAS3-ARHGAP5 NPAS3 chr14 32935003 + ARHGAP5 chr14 32117143 + Exonic hg38 OV TCGA-61-2113-01A 7 5 5'UTR-5'UTR Intra-chr q13.1 Transcription factor q12 Seq+ 98062 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAFB-RFX2 SAFB chr19 5626489 + RFX2 chr19 6047504 - Exonic hg38 OV TCGA-OY-A56P-01A 39 11 CDS-5'UTR Intra-chr p13.3 Tumor suppressor gene Transcription factor p13.3 Transcription factor Seq+ 98063 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETNK1-MYO9B ETNK1 chr12 22625586 + MYO9B chr19 17187935 + Exonic hg38 OV TCGA-OY-A56P-01A 35 18 In-Frame Inter-chr p12.1 p13.11 Seq+ 98064 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO6-PKP2 ANO6 chr12 45378113 + PKP2 chr12 32802556 - Exonic hg38 OV TCGA-OY-A56P-01A 14 4 Out-of-frame Intra-chr q12 p11.21 Seq+ 98065 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOGA1-GPI SOGA1 chr20 36793249 - GPI chr19 34393248 + Exonic hg38 OV TCGA-OY-A56P-01A 14 2 In-Frame Inter-chr q11.23 Seq+ 98066 ChimerSeq TCGA FAWG TCGA_RNA-Seq HECTD4-HSPB8 HECTD4 chr12 112190786 - HSPB8 chr12 119187025 + Exonic hg38 OV TCGA-OY-A56P-01A 9 8 In-Frame Intra-chr q24.13 q24.23 Seq+ 98067 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBNO1-DDX55 SBNO1 chr12 123304582 - DDX55 chr12 123615185 + Exonic hg38 OV TCGA-OY-A56P-01A 8 7 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 98068 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R37-CEACAM19 PPP1R37 chr19 45093527 + CEACAM19 chr19 44682567 + Exonic hg38 OV TCGA-OY-A56Q-01A 283 129 Out-of-frame Intra-chr q13.32 q13.31 Seq+ 98069 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6R3-RACK1 PPP6R3 chr11 68519651 + RACK1 chr5 181238239 - Exonic hg38 OV TCGA-OY-A56Q-01A 55 14 5'UTR-CDS Inter-chr q13.2 q35.3 Tumor suppressor gene 98070 ChimerSeq TCGA FAWG TCGA_RNA-Seq SORL1-CEP164 SORL1 chr11 121497049 + CEP164 chr11 117380614 + Exonic hg38 OV TCGA-VG-A8LO-01A 183 59 In-Frame Intra-chr q24.1 q23.3 Seq+ 98071 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLDN7-TMEM256 CLDN7 chr17 7261821 - TMEM256 chr17 7403689 - Exonic hg38 OV TCGA-VG-A8LO-01A 91 58 5'UTR-5'UTR Intra-chr p13.1 Seq+ 98072 ChimerSeq TCGA FAWG TCGA_RNA-Seq PICALM-ME3 PICALM chr11 85996826 - ME3 chr11 86487440 - Exonic hg38 OV TCGA-VG-A8LO-01A 49 22 Out-of-frame Intra-chr q14.2 q14.2 Seq+ 98073 ChimerSeq TCGA FAWG TCGA_RNA-Seq FN3K-HEXDC FN3K chr17 82735777 + HEXDC chr17 82439631 + Exonic hg38 OV TCGA-VG-A8LO-01A 36 12 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 98074 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPSF1-RECQL4 CPSF1 chr8 144399276 - RECQL4 chr8 144516764 - Exonic hg38 OV TCGA-VG-A8LO-01A 31 24 5'UTR-CDS Intra-chr q24.3 q24.3 Oncogene Seq+ 98075 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF784-NLRP9 ZNF784 chr19 55621766 - NLRP9 chr19 55708738 - Exonic hg38 OV TCGA-VG-A8LO-01A 12 2 Out-of-frame Intra-chr q13.42 Transcription factor q13.42 Seq+ 98076 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIR-ACE2 PIR chrX 15459657 - ACE2 chrX 15595003 - Exonic hg38 OV TCGA-VG-A8LO-01A 10 8 In-Frame Intra-chr p22.2 p22.2 Seq+ 98077 ChimerSeq TCGA FAWG TCGA_RNA-Seq CIAO1-TMEM127 CIAO1 chr2 96266489 + TMEM127 chr2 96254997 - Exonic hg38 OV TCGA-WR-A838-01A 114 27 In-Frame Intra-chr q11.2 q11.2 Tumor suppressor gene Seq+ 98078 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLB-ASH2L POLB chr8 42369988 + ASH2L chr8 38119270 + Exonic hg38 OV TCGA-WR-A838-01A 12 1 In-Frame Intra-chr p11.21 p11.23 Seq+ 98079 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK1-CHST9 ROCK1 chr18 20959840 - CHST9 chr18 27142905 - Exonic hg38 PAAD TCGA-2J-AAB4-01A 3 5 CDS-5'UTR Intra-chr q11.1 AGC:DMPK q11.2 Seq+ 98080 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2D-PTPRR KMT2D chr12 49059613 - PTPRR chr12 70764778 - Exonic hg38 PAAD TCGA-2J-AAB4-01A 2 5 5'UTR-CDS Intra-chr q13.12 Oncogene q15 Seq+ 98081 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNG12-SPATA6 GNG12 chr1 67777458 - SPATA6 chr1 48385349 - Exonic hg38 PAAD TCGA-2J-AABF-01A 2 12 5'UTR-CDS Intra-chr p31.3 p33 Seq+ 98082 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC9-MROH5 TRAPPC9 chr8 140221459 - MROH5 chr8 141495483 - Exonic hg38 PAAD TCGA-2J-AABH-01A 2 15 CDS-5'UTR Intra-chr q24.3 Seq+ 98083 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAM15-CHD1L ADAM15 chr1 155059974 + CHD1L chr1 147267426 + Exonic hg38 PAAD TCGA-2J-AABK-01A 15 17 In-Frame Intra-chr q21.3 q21.1 Seq+ 98084 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUBPL-PSMA6 NUBPL chr14 31599379 + PSMA6 chr14 35312881 + Exonic hg38 PAAD TCGA-2J-AABO-01A 1 3 In-Frame Intra-chr q12 q13.2 98085 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIPA1L3-CCDC58 SIPA1L3 chr19 38029156 + CCDC58 chr3 122371800 - Exonic hg38 PAAD TCGA-2J-AABO-01A 1 3 5'UTR-CDS Inter-chr q13.13 q21.1 Seq+ 98086 ChimerSeq TCGA FAWG TCGA_RNA-Seq TGFB1-TRPC6 TGFB1 chr19 41332128 - TRPC6 chr11 101872382 - Exonic hg38 PAAD TCGA-2J-AABP-01A 10 21 CDS-5'UTR Inter-chr q13.2 Tumor suppressor gene q22.1 Seq+ 98087 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM44-CCDC86 TRIM44 chr11 35685336 + CCDC86 chr11 60849940 + Exonic hg38 PAAD TCGA-2J-AABP-01A 8 17 In-Frame Intra-chr p13 q12.2 Seq+ 98088 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSPBP1-ZNF418 HSPBP1 chr19 55277642 - ZNF418 chr19 57922629 - Exonic hg38 PAAD TCGA-2J-AABP-01A 5 10 CDS-3'UTR Intra-chr q13.42 q13.43 Transcription factor Seq+ 98089 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL4A1-ZNF675 COL4A1 chr13 110306944 - ZNF675 chr19 23663158 - Exonic hg38 PAAD TCGA-2J-AABP-01A 1 8 In-Frame Inter-chr q34 p12 Transcription factor Seq+ 98090 ChimerSeq TCGA FAWG TCGA_RNA-Seq IKZF3-PNMT IKZF3 chr17 39864120 - PNMT chr17 39669629 + Exonic hg38 PAAD TCGA-2J-AABP-01A 2 3 In-Frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q12 Seq+ 98091 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF670-CNIH3 ZNF670 chr1 247078594 - CNIH3 chr1 224680958 + Exonic hg38 PAAD TCGA-2J-AABP-01A 1 5 In-Frame Intra-chr q44 Transcription factor q42.12 98092 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKMY1-GPR35 ANKMY1 chr2 240552914 - GPR35 chr2 240629949 + Exonic hg38 PAAD TCGA-2J-AABR-01A 2 4 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 98093 ChimerSeq TCGA FAWG TCGA_RNA-Seq SREBF2-C22orf42 SREBF2 chr22 41833358 + C22orf42 chr22 32159222 - Exonic hg38 PAAD TCGA-2J-AABT-01A 7 15 5'UTR-5'UTR Intra-chr q13.2 Transcription factor q12.3 Seq+ 98094 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBAP2-HMGB3P23 UBAP2 chr9 33973183 - HMGB3P23 chr9 31645051 - Exonic hg38 PAAD TCGA-2J-AABU-01A 14 11 Out-of-frame Intra-chr p13.3 p21.1 Seq+ 98095 ChimerSeq TCGA FAWG TCGA_RNA-Seq WBP1L-SFXN2 WBP1L chr10 102810054 + SFXN2 chr10 102726612 + Exonic hg38 PAAD TCGA-2J-AABU-01A 1 3 CDS-5'UTR Intra-chr q24.32 q24.32 98096 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTRC-PRSS2 CTRC chr1 15443534 + PRSS2 chr7 142773490 + Exonic hg38 PAAD TCGA-2J-AABV-01A 3 44 Out-of-frame Inter-chr p36.21 98097 ChimerSeq TCGA FAWG TCGA_RNA-Seq PNLIP-CELA2A PNLIP chr10 116551232 + CELA2A chr1 15471990 + Exonic hg38 PAAD TCGA-2J-AABV-01A 1 23 In-Frame Inter-chr q25.3 p36.21 98098 ChimerSeq TCGA FAWG TCGA_RNA-Seq LINC-AS2 LINC chr7 130984053 - AS2 chr7 157006877 + Exonic hg38 PAAD TCGA-2J-AABV-01A 1 5 Out-of-frame Intra-chr 98099 ChimerSeq TCGA FAWG TCGA_RNA-Seq P4HB-CELA3A P4HB chr17 81855142 - CELA3A chr1 22012450 + Exonic hg38 PAAD TCGA-2J-AABV-01A 1 5 In-Frame Inter-chr q25.3 p36.12 98100 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSTN-KIZ DSTN chr20 17601045 + KIZ chr20 21229011 + Exonic hg38 PAAD TCGA-2L-AAQE-01A 16 31 Out-of-frame Intra-chr p12.1 p11.23 98101 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNC13B-FAM201A UNC13B chr9 35259050 + FAM201A chr9 38621832 + Exonic hg38 PAAD TCGA-2L-AAQE-01A 3 12 CDS-5'UTR Intra-chr p13.3 p13.1 Seq+ 98102 ChimerSeq TCGA FAWG TCGA_RNA-Seq NME2-TEX14 NME2 chr17 51170049 + TEX14 chr17 58652002 - Exonic hg38 PAAD TCGA-2L-AAQE-01A 2 9 CDS-5'UTR Intra-chr q21.33 Transcription factor q22 Seq+ 98103 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOCS7-PLXDC1 SOCS7 chr17 38377842 + PLXDC1 chr17 39109391 - Exonic hg38 PAAD TCGA-2L-AAQE-01A 1 8 3'UTR-CDS Intra-chr q12 q12 Seq+ 98104 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUSC2-RASSF1 TUSC2 chr3 50327954 - RASSF1 chr3 50332154 - Exonic hg38 PAAD TCGA-2L-AAQI-01A 6 19 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene Seq+ 98105 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUSC3-ASAH1 TUSC3 chr8 15748465 + ASAH1 chr8 18075587 - Exonic hg38 PAAD TCGA-2L-AAQI-01A 1 3 Out-of-frame Intra-chr p22 p22 98106 ChimerSeq TCGA FAWG TCGA_RNA-Seq MATN3-PUM2 MATN3 chr2 19997134 - PUM2 chr2 20263460 - Exonic hg38 PAAD TCGA-2L-AAQJ-01A 2 4 In-Frame Intra-chr p24.1 p24.1 98107 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP1B1-NRG1 ATP1B1 chr1 169111498 + NRG1 chr8 32595828 + Exonic hg38 PAAD TCGA-3A-A9I5-01A 31 78 In-Frame Inter-chr q24.2 p12 KB Pub Seq+ 98108 ChimerSeq TCGA FAWG TCGA_RNA-Seq STYK1-GPR162 STYK1 chr12 10621876 - GPR162 chr12 6825484 + Exonic hg38 PAAD TCGA-3A-A9I9-01A 6 11 Out-of-frame Intra-chr p13.2 p13.31 Seq+ 98109 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANGO6-WWP2 TANGO6 chr16 68974168 + WWP2 chr16 69871804 + Exonic hg38 PAAD TCGA-3A-A9IB-01A 1 3 Out-of-frame Intra-chr q22.1 q22.1 98110 ChimerSeq TCGA FAWG TCGA_RNA-Seq SELENON-TMEM59 SELENON chr1 25812792 + TMEM59 chr1 54040837 - Exonic hg38 PAAD TCGA-3A-A9IH-01A 38 101 In-Frame Intra-chr p36.11 p32.3 98111 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF2-ZMAT5 NF2 chr22 29678323 + ZMAT5 chr22 29742480 - Exonic hg38 PAAD TCGA-3A-A9IH-01A 3 5 Out-of-frame Intra-chr q12.2 Oncogene Tumor suppressor gene q12.2 Seq+ 98112 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRC2-VEZF1 MRC2 chr17 62627920 + VEZF1 chr17 57983393 - Exonic hg38 PAAD TCGA-3A-A9IH-01A 1 4 Out-of-frame Intra-chr q23.2 q22 Transcription factor 98113 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAM-SST BCAM chr19 44821321 + SST chr3 187669027 - Exonic hg38 PAAD TCGA-3A-A9IJ-01A 1000 1000 Out-of-frame Inter-chr q13.32 q27.3 98114 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCA2-BEND2 SMARCA2 chr9 2039900 + BEND2 chrX 18195442 - Exonic hg38 PAAD TCGA-3A-A9IR-01A 13 62 In-Frame Inter-chr p24.3 Tumor suppressor gene p22.13 Seq+ 98115 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPE-GNAS CPE chr4 165379528 + GNAS chr20 58895612 + Exonic hg38 PAAD TCGA-3A-A9IS-01A 1 36 In-Frame Inter-chr q32.3 q13.32 Oncogene 98116 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRN2-GNAS PTPRN2 chr7 157898673 - GNAS chr20 58895612 + Exonic hg38 PAAD TCGA-3A-A9IS-01A 1 8 Out-of-frame Inter-chr q36.3 q13.32 Oncogene 98117 ChimerSeq TCGA FAWG TCGA_RNA-Seq GC-CPE GC chr4 71763408 - CPE chr4 165467688 + Exonic hg38 PAAD TCGA-3A-A9IS-01A 1 6 Out-of-frame Intra-chr q13.3 q32.3 98118 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC9-NECTIN2 CCDC9 chr19 47260839 + NECTIN2 chr19 44865271 + Exonic hg38 PAAD TCGA-3A-A9IU-01A 1000 1000 Out-of-frame Intra-chr q13.32 q13.32 98119 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASZ1-SLC9A1 CASZ1 chr1 10693874 - SLC9A1 chr1 27109777 - Exonic hg38 PAAD TCGA-3A-A9J0-01A 1 55 Out-of-frame Intra-chr p36.22 Transcription factor p36.11 Seq+ 98120 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB2A-STMN2 RAB2A chr8 60517253 + STMN2 chr8 79636802 + Exonic hg38 PAAD TCGA-3A-A9J0-01A 5 35 In-Frame Intra-chr q12.1 q21.13 Seq+ 98121 ChimerSeq TCGA FAWG TCGA_RNA-Seq STX8-RTN1 STX8 chr17 9378552 - RTN1 chr14 59607492 - Exonic hg38 PAAD TCGA-3A-A9J0-01A 5 20 In-Frame Inter-chr p13.1 q23.1 Seq+ 98122 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-IKZF3 NF1 chr17 31236021 + IKZF3 chr17 39832151 - Exonic hg38 PAAD TCGA-3A-A9J0-01A 3 19 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q21.1 Tumor suppressor gene Transcription factor Seq+ 98123 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKN2A-IFNA22P CDKN2A chr9 21994139 - IFNA22P chr9 21278427 - Exonic hg38 PAAD TCGA-3A-A9J0-01A 3 4 CDS-3'UTR Intra-chr p21.3 Oncogene Tumor suppressor gene p21.3 Seq+ 98124 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-CTTN ERBB2 chr17 39715939 + CTTN chr11 70422940 + Exonic hg38 PAAD TCGA-3A-A9J0-01A 1 3 In-Frame Inter-chr q12 Oncogene q13.3 Seq+ 98125 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2G2-ABCG1 UBE2G2 chr21 44787920 - ABCG1 chr21 42284560 + Exonic hg38 PAAD TCGA-3E-AAAY-01A 12 45 In-Frame Intra-chr q22.3 q22.3 Seq+ 98126 ChimerSeq TCGA FAWG TCGA_RNA-Seq WRB-ERG WRB chr21 39380486 + ERG chr21 38445621 - Exonic hg38 PAAD TCGA-3E-AAAY-01A 5 15 Out-of-frame Intra-chr q22.2 q22.2 Oncogene Transcription factor Seq+ 98127 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCG1-BTG3 ABCG1 chr21 42225914 + BTG3 chr21 17609152 - Exonic hg38 PAAD TCGA-3E-AAAY-01A 1 7 CDS-5'UTR Intra-chr q22.3 Tumor suppressor gene Seq+ 98128 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRWD1-WRB BRWD1 chr21 39200219 - WRB chr21 39390698 + Exonic hg38 PAAD TCGA-3E-AAAY-01A 1 5 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 98129 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP6-PTPRO LRP6 chr12 12179810 - PTPRO chr12 15580697 + Exonic hg38 PAAD TCGA-F2-6879-01A 11 62 5'UTR-CDS Intra-chr p12.3 Seq+ 98130 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANK-MARCH7 TANK chr2 161204793 + 2019_ 3_ 7_ chr2 159767284 + Exonic hg38 PAAD TCGA-F2-6879-01A 2 14 Out-of-frame Intra-chr q24.2 Tumor suppressor gene q24.2 Seq+ 98131 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIST4H4-RERG HIST4H4 chr12 14768939 - RERG chr12 15121119 - Exonic hg38 PAAD TCGA-F2-6879-01A 1 10 3'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 98132 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPM7-TNFAIP8L3 TRPM7 chr15 50657781 - TNFAIP8L3 chr15 51058443 - Exonic hg38 PAAD TCGA-F2-6879-01A 1 3 Out-of-frame Intra-chr q21.2 q21.2 98133 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEL-CPA1 CEL chr9 133062068 + CPA1 chr7 130387824 + Exonic hg38 PAAD TCGA-F2-6880-01A 1 181 Out-of-frame Inter-chr q34.13 q32.2 Seq+ 98134 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRSS2-CPA1 PRSS2 chr7 142771022 + CPA1 chr7 130385146 + Exonic hg38 PAAD TCGA-F2-6880-01A 1 178 3'UTR-CDS Intra-chr q32.2 98135 ChimerSeq TCGA FAWG TCGA_RNA-Seq GP2-PRSS2 GP2 chr16 20322869 - PRSS2 chr7 142772049 + Exonic hg38 PAAD TCGA-F2-6880-01A 2 77 CDS-3'UTR Inter-chr p12.3 98136 ChimerSeq TCGA FAWG TCGA_RNA-Seq REG1B-CPA1 REG1B chr2 79085215 - CPA1 chr7 130385902 + Exonic hg38 PAAD TCGA-F2-6880-01A 1000 1000 Out-of-frame Inter-chr p12 q32.2 98137 ChimerSeq TCGA FAWG TCGA_RNA-Seq REG3G-CEL REG3G chr2 79027155 + CEL chr9 133066596 + Exonic hg38 PAAD TCGA-F2-7273-01A 1000 1000 Out-of-frame Inter-chr p12 q34.13 98138 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUX1-BRAF CUX1 chr7 102115273 + BRAF chr7 140794467 - Exonic hg38 PAAD TCGA-F2-A44H-01A 2 4 In-Frame Intra-chr q22.1 Tumor suppressor gene Transcription factor q34 TKL:RAF Oncogene Seq+ 98139 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHRSX-RPS4Y1 DHRSX chrY 2291502 - RPS4Y1 chrY 2865088 + Exonic hg38 PAAD TCGA-F2-A7TX-01A 5 21 CDS-3'UTR Intra-chr p22.33 p11.2 Seq+ 98140 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM63A-LEFTY1 TMEM63A chr1 225865897 - LEFTY1 chr1 225888032 - Exonic hg38 PAAD TCGA-F2-A7TX-01A 2 8 Out-of-frame Intra-chr q42.12 q42.12 Tumor suppressor gene Seq+ 98141 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPSF6-DCN CPSF6 chr12 69262562 + DCN chr12 91146252 - Exonic hg38 PAAD TCGA-FB-A7DR-01A 2 1 3'UTR-CDS Intra-chr q15 q21.33 Tumor suppressor gene 98142 ChimerSeq TCGA FAWG TCGA_RNA-Seq EML4-NTRK3 EML4 chr2 42264731 + NTRK3 chr15 88033045 - Exonic hg38 PAAD TCGA-FB-AAPP-01A 4 26 In-Frame Inter-chr p21 Oncogene q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 98143 ChimerSeq TCGA FAWG TCGA_RNA-Seq ORAI2-SLC47A2 ORAI2 chr7 102439181 + SLC47A2 chr17 19681670 - Exonic hg38 PAAD TCGA-FB-AAPZ-01A 7 17 In-Frame Inter-chr q22.1 p11.2 Seq+ 98144 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPS7B-PTMA COPS7B chr2 231781883 + PTMA chr2 231711348 + Exonic hg38 PAAD TCGA-FB-AAPZ-01A 2 5 In-Frame Intra-chr q37.1 q37.1 Seq+ 98145 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGSF11-UPK1B IGSF11 chr3 119034531 - UPK1B chr3 119186714 + Exonic hg38 PAAD TCGA-FB-AAQ1-01A 2 3 5'UTR-5'UTR Intra-chr q13.32 q13.32 Seq+ 98146 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSMCE2-TBC1D31 NSMCE2 chr8 125182256 + TBC1D31 chr8 123140761 + Exonic hg38 PAAD TCGA-FB-AAQ2-01A 1 14 Out-of-frame Intra-chr q24.13 q24.13 98147 ChimerSeq TCGA FAWG TCGA_RNA-Seq CIRBP-APC2 CIRBP chr19 1272051 + APC2 chr19 1465155 + Exonic hg38 PAAD TCGA-FB-AAQ2-01A 1 8 Out-of-frame Intra-chr p13.3 p13.3 98148 ChimerSeq TCGA FAWG TCGA_RNA-Seq LASP1-RBX1 LASP1 chr17 38890504 + RBX1 chr22 40953555 + Exonic hg38 PAAD TCGA-FB-AAQ3-01A 6 2 In-Frame Inter-chr q12 q13.2 Seq+ 98149 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2IRD1-CCDC146 GTF2IRD1 chr7 74454176 + CCDC146 chr7 77167658 + Exonic hg38 PAAD TCGA-H6-8124-01A 3 10 5'UTR-5'UTR Intra-chr q11.23 Transcription factor q11.23 Seq+ 98150 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXW7-SH3D19 FBXW7 chr4 152328208 - SH3D19 chr4 151226086 - Exonic hg38 PAAD TCGA-H8-A6C1-01A 10 27 CDS-5'UTR Intra-chr q31.3 Oncogene Tumor suppressor gene q31.3 Seq+ 98151 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0922-LRAT KIAA0922 chr4 153473888 + LRAT chr4 154728703 + Exonic hg38 PAAD TCGA-H8-A6C1-01A 1 5 Out-of-frame Intra-chr q31.3 q32.1 98152 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFC3H1-PTPRR ZFC3H1 chr12 71623360 - PTPRR chr12 70746086 - Exonic hg38 PAAD TCGA-HV-A5A3-01A 4 17 Out-of-frame Intra-chr q21.1 q15 98153 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSHZ3-CDH2 TSHZ3 chr19 31349180 - CDH2 chr18 28013909 - Exonic hg38 PAAD TCGA-HV-A5A3-01A 2 7 In-Frame Inter-chr q12 Transcription factor q12.1 Oncogene Seq+ 98154 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARF3-WNT10B ARF3 chr12 48957310 - WNT10B chr12 48970569 - Exonic hg38 PAAD TCGA-HV-A5A5-01A 3 19 5'UTR-5'UTR Intra-chr q13.12 q13.12 Seq+ 98155 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIPA1L3-CATSPERG SIPA1L3 chr19 37932692 + CATSPERG chr19 38370159 + Exonic hg38 PAAD TCGA-HV-A5A5-01A 1 11 5'UTR-CDS Intra-chr q13.13 q13.2 98156 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBF1-MLC1 SBF1 chr22 50474786 - MLC1 chr22 50068555 - Exonic hg38 PAAD TCGA-HV-A5A6-01A 12 15 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 98157 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL1A-ZNF521 OSBPL1A chr18 24225042 - ZNF521 chr18 25062741 - Exonic hg38 PAAD TCGA-HV-AA8X-01A 10 30 Out-of-frame Intra-chr q11.2 q11.2 Oncogene Transcription factor Seq+ 98158 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRYL1-GJB6 CRYL1 chr13 20489370 - GJB6 chr13 20223495 - Exonic hg38 PAAD TCGA-HZ-7289-01A 19 48 CDS-5'UTR Intra-chr q12.11 q12.11 Seq+ 98159 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEL-NTRK1 CEL chr9 133067205 + NTRK1 chr1 156873633 + Exonic hg38 PAAD TCGA-HZ-7918-01A 80 61 In-Frame Inter-chr q34.13 q23.1 Oncogene Seq+ 98160 ChimerSeq TCGA FAWG TCGA_RNA-Seq CERS5-MYRFL CERS5 chr12 50167101 - MYRFL chr12 69855280 + Exonic hg38 PAAD TCGA-HZ-7922-01A 2 5 Out-of-frame Intra-chr q13.12 q15 Transcription factor Seq+ 98161 ChimerSeq TCGA FAWG TCGA_RNA-Seq HADH-ZP2 HADH chr4 107990064 + ZP2 chr16 21203251 - Exonic hg38 PAAD TCGA-HZ-7925-01A 7 9 CDS-5'UTR Inter-chr q25 Seq+ 98162 ChimerSeq TCGA FAWG TCGA_RNA-Seq TYK2-CDC37 TYK2 chr19 10378214 - CDC37 chr19 10393441 - Exonic hg38 PAAD TCGA-HZ-7926-01A 5 37 Out-of-frame Intra-chr p13.2 TK:JakA p13.2 Seq+ 98163 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF292-DLGAP1 ZNF292 chr6 87218731 + DLGAP1 chr18 4151287 - Exonic hg38 PAAD TCGA-HZ-7926-01A 2 3 CDS-5'UTR Inter-chr q14.3 Tumor suppressor gene Transcription factor p11.31 98164 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA5-ACRBP PLEKHA5 chr12 19132450 + ACRBP chr12 6646577 - Exonic hg38 PAAD TCGA-HZ-8002-01A 1 3 Out-of-frame Intra-chr p12.3 p13.31 Seq+ 98165 ChimerSeq TCGA FAWG TCGA_RNA-Seq REG3G-PRSS1 REG3G chr2 79027909 + PRSS1 chr7 142751964 + Exonic hg38 PAAD TCGA-HZ-8003-01A 1000 1000 Out-of-frame Inter-chr p12 98166 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFHD2-CTRB2 EFHD2 chr1 15429395 + CTRB2 chr16 75206111 - Exonic hg38 PAAD TCGA-HZ-8003-01A 1000 1000 Out-of-frame Inter-chr p36.21 q23.1 98167 ChimerSeq TCGA FAWG TCGA_RNA-Seq REG3G-CPA1 REG3G chr2 79028428 + CPA1 chr7 130382113 + Exonic hg38 PAAD TCGA-HZ-8003-01A 1000 1000 Out-of-frame Inter-chr p12 q32.2 98168 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASC21-CASC11 CASC21 chr8 127339435 + CASC11 chr8 127733959 - Exonic hg38 PAAD TCGA-HZ-8005-01A 3 15 5'UTR-3'UTR Intra-chr q24.21 q24.21 98169 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC57-SECTM1 CCDC57 chr17 82212785 - SECTM1 chr17 82327292 - Exonic hg38 PAAD TCGA-HZ-8005-01A 1 1 5'UTR-5'UTR Intra-chr q25.3 q25.3 98170 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK1E-MB CSNK1E chr22 38398438 - MB chr22 35637208 - Exonic hg38 PAAD TCGA-HZ-8005-01A 1000 1000 Out-of-frame Intra-chr q13.1 q12.3 Seq+ 98171 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R13L-CCDC9 PPP1R13L chr19 45404999 - CCDC9 chr19 47266611 + Exonic hg38 PAAD TCGA-HZ-8315-01A 38 154 5'UTR-CDS Intra-chr q13.32 q13.32 Seq+ 98172 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM49B-CASC8 FAM49B chr8 129903312 - CASC8 chr8 127420963 - Exonic hg38 PAAD TCGA-HZ-8317-01A 5 23 5'UTR-3'UTR Intra-chr q24.21 q24.21 Seq+ 98173 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHST6-FA2H CHST6 chr16 75481817 - FA2H chr16 74740115 - Exonic hg38 PAAD TCGA-HZ-8317-01A 4 10 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 98174 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD4B-OXCT1 FRMD4B chr3 69218322 - OXCT1 chr5 41801070 - Exonic hg38 PAAD TCGA-HZ-8636-01A 6 21 In-Frame Inter-chr p14.1 p13.1 Seq+ 98175 ChimerSeq TCGA FAWG TCGA_RNA-Seq CABLES1-MYO5B CABLES1 chr18 23194540 + MYO5B chr18 50055378 - Exonic hg38 PAAD TCGA-HZ-8636-01A 1 3 Out-of-frame Intra-chr q11.2 Tumor suppressor gene q21.1 98176 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H7B-RBX1 ZC3H7B chr22 41356808 + RBX1 chr22 40972476 + Exonic hg38 PAAD TCGA-HZ-8637-01A 5 33 In-Frame Intra-chr q13.2 q13.2 Seq+ 98177 ChimerSeq TCGA FAWG TCGA_RNA-Seq REV1-AFF3 REV1 chr2 99449336 - AFF3 chr2 99568915 - Exonic hg38 PAAD TCGA-HZ-8637-01A 6 10 In-Frame Intra-chr q11.2 q11.2 Oncogene Seq+ 98178 ChimerSeq TCGA FAWG TCGA_RNA-Seq TACC2-MAP3K5 TACC2 chr10 122019881 + MAP3K5 chr6 136611387 - Exonic hg38 PAAD TCGA-HZ-A49G-01A 2 7 5'UTR-CDS Inter-chr q26.13 q23.3 STE:STE11 Seq+ 98179 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRIG3-ATF7 LRIG3 chr12 58913982 - ATF7 chr12 53601021 - Exonic hg38 PAAD TCGA-HZ-A49I-01A 31 116 CDS-5'UTR Intra-chr q14.1 Tumor suppressor gene q13.13 Transcription factor Seq+ 98180 ChimerSeq TCGA FAWG TCGA_RNA-Seq AXL-CDRT1 AXL chr19 41231298 + CDRT1 chr17 15566353 - Exonic hg38 PAAD TCGA-HZ-A49I-01A 21 23 CDS-3'UTR Inter-chr q13.2 TK:Axl Oncogene p12 Seq+ 98181 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPHLN1-TIMELESS PPHLN1 chr12 42393689 + TIMELESS chr12 56425152 - Exonic hg38 PAAD TCGA-HZ-A49I-01A 6 34 In-Frame Intra-chr q12 q13.3 Seq+ 98182 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEL1L3-HSD17B13 SEL1L3 chr4 25833448 - HSD17B13 chr4 87318436 - Exonic hg38 PAAD TCGA-HZ-A49I-01A 1 25 Out-of-frame Intra-chr p15.2 q22.1 Seq+ 98183 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-MMP19 FRS2 chr12 69470530 + MMP19 chr12 55842438 - Exonic hg38 PAAD TCGA-HZ-A49I-01A 1 11 5'UTR-CDS Intra-chr q15 q13.2 Seq+ 98184 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2CD5-BCAT1 C2CD5 chr12 22474751 - BCAT1 chr12 24849949 - Exonic hg38 PAAD TCGA-HZ-A49I-01A 1 7 In-Frame Intra-chr p12.1 p12.1 98185 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1H-DYRK2 PPM1H chr12 62788226 - DYRK2 chr12 67657106 + Exonic hg38 PAAD TCGA-HZ-A49I-01A 1 3 Out-of-frame Intra-chr q14.2 q15 CMGC:DYRK Seq+ 98186 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPAT-IGFBP7 PPAT chr4 56401330 - IGFBP7 chr4 57040933 - Exonic hg38 PAAD TCGA-HZ-A4BH-01A 1 25 In-Frame Intra-chr q12 q12 Tumor suppressor gene 98187 ChimerSeq TCGA FAWG TCGA_RNA-Seq YPEL2-BPTF YPEL2 chr17 59353526 + BPTF chr17 67853940 + Exonic hg38 PAAD TCGA-HZ-A4BH-01A 1 13 Out-of-frame Intra-chr q22 q24.2 Transcription factor Seq+ 98188 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTN4-NOVA2 ACTN4 chr19 38647907 + NOVA2 chr19 45961153 - Exonic hg38 PAAD TCGA-HZ-A4BH-01A 1 8 3'UTR-CDS Intra-chr q13.32 98189 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX8-MSI2 DHX8 chr17 43490463 + MSI2 chr17 57596868 + Exonic hg38 PAAD TCGA-HZ-A4BK-01A 5 9 In-Frame Intra-chr q21.31 q22 Seq+ 98190 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRIG3-ATF7 LRIG3 chr12 58913982 - ATF7 chr12 53601021 - Exonic hg38 PAAD TCGA-HZ-A4BK-01A 1 1 CDS-5'UTR Intra-chr q14.1 Tumor suppressor gene q13.13 Transcription factor Seq+ 98191 ChimerSeq TCGA FAWG TCGA_RNA-Seq TDP2-DCDC2 TDP2 chr6 24652983 - DCDC2 chr6 24302044 - Exonic hg38 PAAD TCGA-HZ-A77P-01A 9 22 In-Frame Intra-chr p22.3 p22.3 Tumor suppressor gene Seq+ 98192 ChimerSeq TCGA FAWG TCGA_RNA-Seq IKBKB-LETM2 IKBKB chr8 42272205 + LETM2 chr8 38400272 + Exonic hg38 PAAD TCGA-HZ-A77P-01A 5 18 In-Frame Intra-chr p11.21 Oncogene p11.23 Seq+ 98193 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCMTD1-MRPL15 PCMTD1 chr8 51898930 - MRPL15 chr8 54136511 + Exonic hg38 PAAD TCGA-HZ-A77P-01A 6 5 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 98194 ChimerSeq TCGA FAWG TCGA_RNA-Seq STEAP2-GTPBP10 STEAP2 chr7 90227498 + GTPBP10 chr7 90372155 + Exonic hg38 PAAD TCGA-HZ-A77P-01A 1 3 Out-of-frame Intra-chr q21.13 q21.13 98195 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITPR3-CARMIL1 ITPR3 chr6 33674265 + CARMIL1 chr6 25619447 + Exonic hg38 PAAD TCGA-HZ-A77P-01A 1 1 Out-of-frame Intra-chr p21.31 p22.2 98196 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP5-L2HGDH ARHGAP5 chr14 32094386 + L2HGDH chr14 50294246 - Exonic hg38 PAAD TCGA-IB-7646-01A 4 12 In-Frame Intra-chr q12 q21.3 Seq+ 98197 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBXN8-NRG1 UBXN8 chr8 30756887 + NRG1 chr8 32287101 + Exonic hg38 PAAD TCGA-IB-7646-01A 2 9 CDS-5'UTR Intra-chr p12 p12 98198 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSI2-HEATR6 MSI2 chr17 57529724 + HEATR6 chr17 60070807 - Exonic hg38 PAAD TCGA-IB-7646-01A 1 6 Out-of-frame Intra-chr q22 q23.1 98199 ChimerSeq TCGA FAWG TCGA_RNA-Seq GMDS-VAPB GMDS chr6 1930103 - VAPB chr20 58444077 + Exonic hg38 PAAD TCGA-IB-7647-01A 118 310 In-Frame Inter-chr p25.3 q13.32 Seq+ 98200 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPIL2-TBX1 PPIL2 chr22 21675115 + TBX1 chr22 19779220 + Exonic hg38 PAAD TCGA-IB-7647-01A 1 10 In-Frame Intra-chr q11.21 q11.21 Transcription factor Seq+ 98201 ChimerSeq TCGA FAWG TCGA_RNA-Seq B3GNT4-BCL7A B3GNT4 chr12 122203801 + BCL7A chr12 122030700 + Exonic hg38 PAAD TCGA-IB-7647-01A 1 9 5'UTR-3'UTR Intra-chr q24.31 Seq+ 98202 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLPH3L-HORMAD1 GOLPH3L chr1 150694656 - HORMAD1 chr1 150703393 - Exonic hg38 PAAD TCGA-IB-7652-01A 11 76 In-Frame Intra-chr q21.3 q21.3 Seq+ 98203 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCF1-PRR3 ABCF1 chr6 30571560 + PRR3 chr6 30561834 + Exonic hg38 PAAD TCGA-IB-7652-01A 5 29 3'UTR-3'UTR Intra-chr Seq+ 98204 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDSS2-CCDC178 PDSS2 chr6 107334198 - CCDC178 chr18 32974681 - Exonic hg38 PAAD TCGA-IB-7652-01A 3 27 Out-of-frame Inter-chr q21 Tumor suppressor gene q12.1 Seq+ 98205 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC20-GJB6 ZDHHC20 chr13 21459054 - GJB6 chr13 20223495 - Exonic hg38 PAAD TCGA-IB-7652-01A 1 9 5'UTR-5'UTR Intra-chr q12.11 q12.11 Seq+ 98206 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEL-CPA1 CEL chr9 133064762 + CPA1 chr7 130385146 + Exonic hg38 PAAD TCGA-IB-7652-01A 1 6 In-Frame Inter-chr q34.13 q32.2 Seq+ 98207 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC35F2-AMPD3 SLC35F2 chr11 107803001 - AMPD3 chr11 10461515 + Exonic hg38 PAAD TCGA-IB-7652-01A 1 4 Out-of-frame Intra-chr q22.3 p15.4 Seq+ 98208 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6R3-SSH3 PPP6R3 chr11 68519651 + SSH3 chr11 67306838 + Exonic hg38 PAAD TCGA-IB-7654-01A 21 61 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 98209 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM8A1-CAP2 FAM8A1 chr6 17601121 + CAP2 chr6 17540973 + Exonic hg38 PAAD TCGA-IB-7654-01A 3 19 In-Frame Intra-chr p22.3 p22.3 Seq+ 98210 ChimerSeq TCGA FAWG TCGA_RNA-Seq EMILIN2-SMCHD1 EMILIN2 chr18 2909819 + SMCHD1 chr18 2802528 + Exonic hg38 PAAD TCGA-IB-7654-01A 4 5 Out-of-frame Intra-chr p11.32 p11.32 Tumor suppressor gene Seq+ 98211 ChimerSeq TCGA FAWG TCGA_RNA-Seq CENPBD1P1-RPS5 CENPBD1P1 chr19 58575588 + RPS5 chr19 58392976 + Exonic hg38 PAAD TCGA-IB-7885-01A 3 23 5'UTR-3'UTR Intra-chr q13.43 q13.43 98212 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND4C-ANP32B DENND4C chr9 19230833 + ANP32B chr9 98011271 + Exonic hg38 PAAD TCGA-IB-7890-01A 1 34 5'UTR-CDS Intra-chr p22.1 q22.33 Seq+ 98213 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIBP1-TSPAN11 PPFIBP1 chr12 27524365 + TSPAN11 chr12 30953981 + Exonic hg38 PAAD TCGA-IB-7890-01A 2 4 5'UTR-5'UTR Intra-chr p11.23 p11.21 Seq+ 98214 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1A-WDTC1 ARID1A chr1 26775707 + WDTC1 chr1 27282239 + Exonic hg38 PAAD TCGA-IB-7893-01A 13 71 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 Seq+ 98215 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA4-PSAP LAMA4 chr6 112172611 - PSAP chr10 71822007 - Exonic hg38 PAAD TCGA-IB-7893-01A 2 1 In-Frame Inter-chr q21 q22.1 98216 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD4-ASTN2 STARD4 chr5 111501002 - ASTN2 chr9 117008259 - Exonic hg38 PAAD TCGA-IB-7893-01A 1 2 In-Frame Inter-chr q22.1 q33.1 Seq+ 98217 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIB1-GREB1L MIB1 chr18 21741812 + GREB1L chr18 21505412 + Exonic hg38 PAAD TCGA-IB-A5SQ-01A 1 3 In-Frame Intra-chr q11.2 q11.1 Seq+ 98218 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERPINE1-COL1A2 SERPINE1 chr7 101128664 + COL1A2 chr7 94430247 + Exonic hg38 PAAD TCGA-IB-A5SS-01A 2 1 Out-of-frame Intra-chr q22.1 q21.3 98219 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREB3-TMEM8B CREB3 chr9 35733485 + TMEM8B chr9 35845975 + Exonic hg38 PAAD TCGA-IB-A5ST-01A 53 164 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 98220 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGO2-CHRAC1 AGO2 chr8 140635485 - CHRAC1 chr8 140514369 + Exonic hg38 PAAD TCGA-IB-A6UF-01A 4 28 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 98221 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIS3L2-EFHD1 DIS3L2 chr2 232163632 + EFHD1 chr2 232662802 + Exonic hg38 PAAD TCGA-IB-A6UF-01A 2 16 In-Frame Intra-chr q37.1 q37.1 Seq+ 98222 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKP2-MRPS35 PKP2 chr12 32796109 - MRPS35 chr12 27735447 + Exonic hg38 PAAD TCGA-IB-A6UF-01A 2 10 Out-of-frame Intra-chr p11.21 p11.22 Seq+ 98223 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCTD5-CCNF KCTD5 chr16 2696043 + CCNF chr16 2443649 + Exonic hg38 PAAD TCGA-IB-A6UF-01A 2 4 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 98224 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKL1-ENTHD1 MKL1 chr22 40552106 - ENTHD1 chr22 39765609 - Exonic hg38 PAAD TCGA-IB-A6UG-01A 4 13 Out-of-frame Intra-chr q13.2 q13.1 Seq+ 98225 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRSS2-CELA3A PRSS2 chr7 142774055 + CELA3A chr1 22009705 + Exonic hg38 PAAD TCGA-IB-A6UG-01A 1 23 3'UTR-CDS Inter-chr p36.12 98226 ChimerSeq TCGA FAWG TCGA_RNA-Seq REG3A-CTRB2 REG3A chr2 79157572 - CTRB2 chr16 75204322 - Exonic hg38 PAAD TCGA-IB-A6UG-01A 1 4 CDS-3'UTR Inter-chr p12 q23.1 98227 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUPT5H-SAMD4B SUPT5H chr19 39459960 + SAMD4B chr19 39380990 + Exonic hg38 PAAD TCGA-IB-A7LX-01A 18 126 In-Frame Intra-chr q13.2 q13.2 Seq+ 98228 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHI1-HBS1L AHI1 chr6 135394776 - HBS1L chr6 134966473 - Exonic hg38 PAAD TCGA-IB-A7LX-01A 3 15 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 98229 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEH1L-IMPA2 SEH1L chr18 12951905 + IMPA2 chr18 11999054 + Exonic hg38 PAAD TCGA-IB-A7M4-01A 17 53 In-Frame Intra-chr p11.21 p11.21 Seq+ 98230 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK1-ANKRD29 ROCK1 chr18 21015431 - ANKRD29 chr18 23601309 - Exonic hg38 PAAD TCGA-IB-A7M4-01A 2 3 In-Frame Intra-chr q11.1 AGC:DMPK q11.2 Seq+ 98231 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELA3A-PRSS2 CELA3A chr1 22006993 + PRSS2 chr7 142773490 + Exonic hg38 PAAD TCGA-IB-AAUM-01A 5 96 Out-of-frame Inter-chr p36.12 98232 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRSS1-PNLIP PRSS1 chr7 142749524 + PNLIP chr10 116555178 + Exonic hg38 PAAD TCGA-IB-AAUM-01A 1 93 3'UTR-CDS Inter-chr q25.3 Seq+ 98233 ChimerSeq TCGA FAWG TCGA_RNA-Seq PNLIP-PLA2G1B PNLIP chr10 116556118 + PLA2G1B chr12 120322317 - Exonic hg38 PAAD TCGA-IB-AAUM-01A 1 8 Out-of-frame Inter-chr q25.3 q24.31 98234 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP153-C6orf10 NUP153 chr6 17706277 - C6orf10 chr6 32369983 - Exonic hg38 PAAD TCGA-IB-AAUN-01A 2 11 Out-of-frame Intra-chr p22.3 Seq+ 98235 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNGAP1-COL11A2 SYNGAP1 chr6 33425903 + COL11A2 chr6 33166206 - Exonic hg38 PAAD TCGA-IB-AAUN-01A 3 4 3'UTR-5'UTR Intra-chr Seq+ 98236 ChimerSeq TCGA FAWG TCGA_RNA-Seq AXIN2-VWA3B AXIN2 chr17 65557806 - VWA3B chr2 98256124 + Exonic hg38 PAAD TCGA-IB-AAUP-01A 6 21 In-Frame Inter-chr q24.1 Tumor suppressor gene q11.2 Seq+ 98237 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACAP3-SCNN1D ACAP3 chr1 1294529 - SCNN1D chr1 1280625 + Exonic hg38 PAAD TCGA-IB-AAUQ-01A 4 6 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 98238 ChimerSeq TCGA FAWG TCGA_RNA-Seq MUC4-PCYT1A MUC4 chr3 195811736 - PCYT1A chr3 196214373 - Exonic hg38 PAAD TCGA-IB-AAUQ-01A 3 4 3'UTR-3'UTR Intra-chr q29 Seq+ 98239 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG5-RTN4IP1 ATG5 chr6 106201972 - RTN4IP1 chr6 106592300 - Exonic hg38 PAAD TCGA-IB-AAUQ-01A 2 4 Out-of-frame Intra-chr q21 q21 Tumor suppressor gene Seq+ 98240 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNPEP-TIMM17A RNPEP chr1 201983113 + TIMM17A chr1 201957511 + Exonic hg38 PAAD TCGA-IB-AAUR-01A 2 3 In-Frame Intra-chr q32.1 q32.1 98241 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNTNAP3B-SHB CNTNAP3B chr9 42076869 - SHB chr9 38016131 - Exonic hg38 PAAD TCGA-IB-AAUS-01A 4 11 In-Frame Intra-chr p11.2 p13.1 98242 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKIB1-CYP3A4 ANKIB1 chr7 92392292 + CYP3A4 chr7 99762267 - Exonic hg38 PAAD TCGA-IB-AAUS-01A 1 8 In-Frame Intra-chr q21.2 q22.1 Seq+ 98243 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNCAIP-CSNK1G3 SNCAIP chr5 122403865 + CSNK1G3 chr5 123545417 + Exonic hg38 PAAD TCGA-IB-AAUU-01A 3 8 5'UTR-5'UTR Intra-chr q23.2 q23.2 Seq+ 98244 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFNGR2-NUDCD3 IFNGR2 chr21 33432871 + NUDCD3 chr7 44404583 - Exonic hg38 PAAD TCGA-L1-A7W4-01A 98 227 3'UTR-CDS Inter-chr p13 Seq+ 98245 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK4-B9D1 PAK4 chr19 39125919 + B9D1 chr17 19347880 - Exonic hg38 PAAD TCGA-L1-A7W4-01A 1 83 5'UTR-5'UTR Inter-chr q13.2 STE:STE20 p11.2 Seq+ 98246 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPINT2-ZNF260 SPINT2 chr19 38264998 + ZNF260 chr19 36515699 - Exonic hg38 PAAD TCGA-L1-A7W4-01A 11 27 CDS-5'UTR Intra-chr q13.2 Tumor suppressor gene q13.12 Transcription factor Seq+ 98247 ChimerSeq TCGA FAWG TCGA_RNA-Seq GUCD1-TMEM211 GUCD1 chr22 24555615 - TMEM211 chr22 24939552 - Exonic hg38 PAAD TCGA-L1-A7W4-01A 4 40 CDS-5'UTR Intra-chr q11.23 q11.23 Seq+ 98248 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUDCD3-IFNGR2 NUDCD3 chr7 44425900 - IFNGR2 chr21 33436828 + Exonic hg38 PAAD TCGA-L1-A7W4-01A 3 26 CDS-3'UTR Inter-chr p13 Seq+ 98249 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAXC-ASCC3 FAXC chr6 99342898 - ASCC3 chr6 100512918 - Exonic hg38 PAAD TCGA-L1-A7W4-01A 3 13 In-Frame Intra-chr q16.2 q16.3 Seq+ 98250 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3BP4-LANCL1 SH3BP4 chr2 234995376 + LANCL1 chr2 210476412 - Exonic hg38 PAAD TCGA-L1-A7W4-01A 2 10 5'UTR-5'UTR Intra-chr q37.2 q34 Seq+ 98251 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF26B-C1orf101 KIF26B chr1 245367367 + C1orf101 chr1 244610240 + Exonic hg38 PAAD TCGA-LB-A7SX-01A 16 28 Out-of-frame Intra-chr Seq+ 98252 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM170B-SMIM13 TMEM170B chr6 11538374 + SMIM13 chr6 11134403 + Exonic hg38 PAAD TCGA-LB-A7SX-01A 3 13 In-Frame Intra-chr p24.2 p24.2 Seq+ 98253 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-PPP1R1B ERBB2 chr17 39727547 + PPP1R1B chr17 39635607 + Exonic hg38 PAAD TCGA-LB-A7SX-01A 3 8 In-Frame Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 98254 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEMF-L2HGDH NEMF chr14 49825867 - L2HGDH chr14 50237725 - Exonic hg38 PAAD TCGA-LB-A7SX-01A 4 3 CDS-3'UTR Intra-chr q21.3 q21.3 Seq+ 98255 ChimerSeq TCGA FAWG TCGA_RNA-Seq ICAM3-TYK2 ICAM3 chr19 10334528 - TYK2 chr19 10358138 - Exonic hg38 PAAD TCGA-LB-A7SX-01A 3 3 Out-of-frame Intra-chr p13.2 p13.2 TK:JakA Seq+ 98256 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTRB2-IGF2 CTRB2 chr16 75205773 - IGF2 chr11 2130750 - Exonic hg38 PAAD TCGA-LB-A8F3-01A 1000 1000 Out-of-frame Inter-chr q23.1 p15.5 Oncogene 98257 ChimerSeq TCGA FAWG TCGA_RNA-Seq REG1B-IGF2 REG1B chr2 79085050 - IGF2 chr11 2131667 - Exonic hg38 PAAD TCGA-LB-A8F3-01A 1000 1000 Out-of-frame Inter-chr p12 p15.5 Oncogene 98258 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF12-ATAD3C TAF12 chr1 28642992 - ATAD3C chr1 1468384 + Exonic hg38 PAAD TCGA-Q3-AA2A-01A 3 25 5'UTR-CDS Intra-chr p35.3 p36.33 Seq+ 98259 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKT2-NSMAF AKT2 chr19 40235890 - NSMAF chr8 58595659 - Exonic hg38 PAAD TCGA-RB-AA9M-01A 1 7 Out-of-frame Inter-chr q13.2 AGC:Akt Oncogene q12.1 Seq+ 98260 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC52A2-HSF1 SLC52A2 chr8 144359423 + HSF1 chr8 144311505 + Exonic hg38 PAAD TCGA-RB-AA9M-01A 1 3 3'UTR-3'UTR Intra-chr q24.3 q24.3 Transcription factor 98261 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK11-AZU1 STK11 chr19 1207203 + AZU1 chr19 828230 + Exonic hg38 PAAD TCGA-RL-AAAS-01A 4 3 CDS-3'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 98262 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLG1-FA2H GLG1 chr16 74474546 - FA2H chr16 74714269 - Exonic hg38 PAAD TCGA-RL-AAAS-01A 1 9 Out-of-frame Intra-chr q23.1 q23.1 98263 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC17-CNTN5 TTC17 chr11 43379322 + CNTN5 chr11 99556145 + Exonic hg38 PAAD TCGA-S4-A8RO-01A 1 2 CDS-5'UTR Intra-chr p12 q22.1 98264 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB9A-EGFL6 RAB9A chrX 13689288 + EGFL6 chrX 13589556 + Exonic hg38 PAAD TCGA-S4-A8RP-01A 13 35 5'UTR-CDS Intra-chr p22.2 p22.2 Seq+ 98265 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC6B-CBY1 TNRC6B chr22 40156182 + CBY1 chr22 38665546 + Exonic hg38 PAAD TCGA-S4-A8RP-01A 2 5 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 98266 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF493-RPL13A ZNF493 chr19 21397267 + RPL13A chr19 49489850 + Exonic hg38 PAAD TCGA-US-A776-01A 3 3 In-Frame Intra-chr p12 Transcription factor q13.33 Seq+ 98267 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTAP-PTPRD MTAP chr9 21838010 + PTPRD chr9 9766851 - Exonic hg38 PAAD TCGA-US-A779-01A 24 34 CDS-5'UTR Intra-chr p21.3 Tumor suppressor gene Oncogene Tumor suppressor gene Seq+ 98268 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGO2-PCAT1 AGO2 chr8 140535468 - PCAT1 chr8 127006555 + Exonic hg38 PAAD TCGA-US-A779-01A 11 27 CDS-5'UTR Intra-chr q24.3 q24.21 Seq+ 98269 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAD2-TATDN1 ATAD2 chr8 123396187 - TATDN1 chr8 124495542 - Exonic hg38 PAAD TCGA-US-A779-01A 6 11 Out-of-frame Intra-chr q24.13 q24.13 98270 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD11-DYNLRB2 ANKRD11 chr16 89490245 - DYNLRB2 chr16 80549484 + Exonic hg38 PAAD TCGA-XD-AAUI-01A 15 4 5'UTR-5'UTR Intra-chr q24.3 q23.2 Seq+ 98271 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX52-STAT5B DDX52 chr17 37628561 - STAT5B chr17 42202808 - Exonic hg38 PAAD TCGA-XD-AAUI-01A 2 8 5'UTR-CDS Intra-chr q12 q21.2 Transcription factor Seq+ 98272 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFRKB-CRTAM NFRKB chr11 129876721 - CRTAM chr11 122850068 + Exonic hg38 PAAD TCGA-XD-AAUI-01A 1 3 In-Frame Intra-chr q24.3 q24.1 98273 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPOP-CDK12 SPOP chr17 49677933 - CDK12 chr17 39490557 + Exonic hg38 PAAD TCGA-XD-AAUI-01A 1 2 5'UTR-CDS Intra-chr q21.33 Oncogene Tumor suppressor gene q12 Oncogene 98274 ChimerSeq TCGA FAWG TCGA_RNA-Seq SS18-NPC1 SS18 chr18 26078076 - NPC1 chr18 23506642 - Exonic hg38 PAAD TCGA-XN-A8T3-01A 8 20 CDS-3'UTR Intra-chr q11.2 q11.2 Seq+ 98275 ChimerSeq TCGA FAWG TCGA_RNA-Seq UHRF1BP1-DAXX UHRF1BP1 chr6 34859571 + DAXX chr6 33324030 - Exonic hg38 PAAD TCGA-XN-A8T3-01A 5 6 CDS-5'UTR Intra-chr p21.31 Oncogene Seq+ 98276 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK1-OSBPL1A ROCK1 chr18 21023620 - OSBPL1A chr18 24303718 - Exonic hg38 PAAD TCGA-XN-A8T3-01A 1 7 In-Frame Intra-chr q11.1 AGC:DMPK q11.2 Seq+ 98277 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF8-HIST1H2AC RNF8 chr6 37360574 + HIST1H2AC chr6 26138054 + Exonic hg38 PAAD TCGA-XN-A8T5-01A 2 21 CDS-3'UTR Intra-chr p21.2 Tumor suppressor gene p22.2 Seq+ 98278 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX39B-ETV7 DDX39B chr6 31535367 - ETV7 chr6 36385669 - Exonic hg38 PAAD TCGA-XN-A8T5-01A 4 12 5'UTR-5'UTR Intra-chr p21.31 Transcription factor Seq+ 98279 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCTD20-ZNF311 KCTD20 chr6 36470257 + ZNF311 chr6 29004214 - Exonic hg38 PAAD TCGA-XN-A8T5-01A 1 4 5'UTR-5'UTR Intra-chr p21.31 p22.1 Transcription factor Seq+ 98280 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK1-THNSL1 ROCK1 chr18 21110818 - THNSL1 chr10 25021742 + Exonic hg38 PAAD TCGA-XN-A8T5-01A 1 4 CDS-5'UTR Inter-chr q11.1 AGC:DMPK p12.1 Seq+ 98281 ChimerSeq TCGA FAWG TCGA_RNA-Seq ISCA1-LINGO2 ISCA1 chr9 86282378 - LINGO2 chr9 28670280 - Exonic hg38 PCPG TCGA-P7-A5NX-01A 6 2 CDS-5'UTR Intra-chr q21.33 p21.1 Seq+ 98282 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM245-SDHAP1 TMEM245 chr9 109064477 - SDHAP1 chr3 195963421 - Exonic hg38 PCPG TCGA-P7-A5NX-01A 5 3 CDS-3'UTR Inter-chr q31.3 q29 Seq+ 98283 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSK3B-WNK2 GSK3B chr3 120093347 - WNK2 chr9 93308328 + Exonic hg38 PCPG TCGA-P7-A5NX-01A 2 10 In-Frame Inter-chr q13.33 CMGC:GSK Tumor suppressor gene q22.31 Tumor suppressor gene Seq+ 98284 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOBP-NHSL2 SOBP chr6 107533610 + NHSL2 chrX 72159837 + Exonic hg38 PCPG TCGA-P7-A5NX-01A 4 2 CDS-3'UTR Inter-chr q21 q13.1 98285 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGF2-ASCL2 IGF2 chr11 2130225 - ASCL2 chr11 2270589 - Exonic hg38 PCPG TCGA-P8-A5KC-01A 240 487 Out-of-frame Intra-chr p15.5 Oncogene p15.5 Transcription factor Seq+ 98286 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCYAP1R1-GHRHR ADCYAP1R1 chr7 31100210 + GHRHR chr7 30974971 + Exonic hg38 PCPG TCGA-P8-A5KC-01A 5 25 In-Frame Intra-chr p14.3 p14.3 Seq+ 98287 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBTF-MAML3 UBTF chr17 44210124 - MAML3 chr4 139890967 - Exonic hg38 PCPG TCGA-P8-A5KC-01A 4 17 In-Frame Inter-chr q21.31 q31.1 Seq+ 98288 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAML3-SLC25A39 MAML3 chr4 139889357 - SLC25A39 chr17 44323343 - Exonic hg38 PCPG TCGA-P8-A5KC-01A 1 3 Out-of-frame Inter-chr q31.1 q21.31 98289 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCT2-CPM CCT2 chr12 69585524 + CPM chr12 68859071 - Exonic hg38 PCPG TCGA-PR-A5PF-01A 8 33 Out-of-frame Intra-chr q15 q15 Seq+ 98290 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBTF-MAML3 UBTF chr17 44209352 - MAML3 chr4 139890967 - Exonic hg38 PCPG TCGA-PR-A5PF-01A 1 15 In-Frame Inter-chr q21.31 q31.1 Seq+ 98291 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNC5B-IGF2 UNC5B chr10 71300746 + IGF2 chr11 2132146 - Exonic hg38 PCPG TCGA-PR-A5PG-01A 1000 1000 Out-of-frame Inter-chr q22.1 Tumor suppressor gene p15.5 Oncogene 98292 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBTF-MAML3 UBTF chr17 44209352 - MAML3 chr4 139890967 - Exonic hg38 PCPG TCGA-PR-A5PH-01A 8 21 In-Frame Inter-chr q21.31 q31.1 Seq+ 98293 ChimerSeq TCGA FAWG TCGA_RNA-Seq CC2D1A-ZSWIM4 CC2D1A chr19 13927265 + ZSWIM4 chr19 13828645 + Exonic hg38 PCPG TCGA-PR-A5PH-01A 4 19 In-Frame Intra-chr p13.12 Transcription factor p13.13 Seq+ 98294 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHOX2A-CLPB PHOX2A chr11 72241102 - CLPB chr11 72359008 - Exonic hg38 PCPG TCGA-PR-A5PH-01A 3 3 Out-of-frame Intra-chr q13.4 Tumor suppressor gene Transcription factor q13.4 Seq+ 98295 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAML3-MED24 MAML3 chr4 140152860 - MED24 chr17 40053380 - Exonic hg38 PCPG TCGA-PR-A5PH-01A 1 6 Out-of-frame Inter-chr q31.1 q21.1 Seq+ 98296 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF12-OAF ARHGEF12 chr11 120337275 + OAF chr11 120225661 + Exonic hg38 PCPG TCGA-QR-A6GR-01A 1 7 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Seq+ 98297 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAKD-ADAMTS7 DCAKD chr17 45060888 - ADAMTS7 chr15 78791223 - Exonic hg38 PCPG TCGA-QR-A6GS-01A 2 6 5'UTR-CDS Inter-chr q21.31 q25.1 Seq+ 98298 ChimerSeq TCGA FAWG TCGA_RNA-Seq GON4L-ARHGEF2 GON4L chr1 155853276 - ARHGEF2 chr1 155962718 - Exonic hg38 PCPG TCGA-QR-A6GS-01A 2 1 Out-of-frame Intra-chr q22 q22 Seq+ 98299 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLD3-GNAS PLD3 chr19 40376774 + GNAS chr20 58898941 + Exonic hg38 PCPG TCGA-QR-A6GT-01A 1 4 Out-of-frame Inter-chr q13.2 q13.32 Oncogene 98300 ChimerSeq TCGA FAWG TCGA_RNA-Seq USB1-CX3CL1 USB1 chr16 58014326 + CX3CL1 chr16 57379634 + Exonic hg38 PCPG TCGA-QR-A6GW-01A 5 14 Out-of-frame Intra-chr q21 q21 Seq+ 98301 ChimerSeq TCGA FAWG TCGA_RNA-Seq FTSJ1-QTRT1 FTSJ1 chrX 48479116 + QTRT1 chr19 10712161 + Exonic hg38 PCPG TCGA-QR-A6GW-01A 1 2 In-Frame Inter-chr p11.23 p13.2 98302 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAST2-OMA1 MAST2 chr1 45959477 + OMA1 chr1 58481174 - Exonic hg38 PCPG TCGA-QR-A6H2-01A 4 13 Out-of-frame Intra-chr p34.1 AGC:MAST p32.1 Seq+ 98303 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTIF-CCDC107 CTIF chr18 48817376 + CCDC107 chr9 35658576 + Exonic hg38 PCPG TCGA-QR-A6H4-01A 3 3 3'UTR-CDS Inter-chr p13.3 Seq+ 98304 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS35-ST6GALNAC5 MRPS35 chr12 27724186 + ST6GALNAC5 chr1 77044204 + Exonic hg38 PCPG TCGA-QR-A6H4-01A 1 4 In-Frame Inter-chr p11.22 p31.1 Seq+ 98305 ChimerSeq TCGA FAWG TCGA_RNA-Seq IRF2BP2-SP2 IRF2BP2 chr1 234608668 - SP2 chr17 47924917 + Exonic hg38 PCPG TCGA-QR-A700-01A 20 227 Out-of-frame Inter-chr q42.3 q21.32 Transcription factor Seq+ 98306 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF12-MCAM ARHGEF12 chr11 120337275 + MCAM chr11 119317915 - Exonic hg38 PCPG TCGA-QR-A700-01A 2 5 CDS-5'UTR Intra-chr q23.3 Tumor suppressor gene q23.3 98307 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-RAB11FIP4 NF1 chr17 31214585 + RAB11FIP4 chr17 31517651 + Exonic hg38 PCPG TCGA-QR-A707-01A 2 16 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 98308 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNPO2-METTL14 SYNPO2 chr4 118889141 + METTL14 chr4 118700550 + Exonic hg38 PCPG TCGA-QR-A707-01A 3 5 In-Frame Intra-chr q26 Tumor suppressor gene q26 Seq+ 98309 ChimerSeq TCGA FAWG TCGA_RNA-Seq IRF2BP2-SP2 IRF2BP2 chr1 234608447 - SP2 chr17 47924919 + Exonic hg38 PCPG TCGA-QR-A708-01A 2 37 In-Frame Inter-chr q42.3 q21.32 Transcription factor Seq+ 98310 ChimerSeq TCGA FAWG TCGA_RNA-Seq VSTM2L-CTNNBL1 VSTM2L chr20 37933589 + CTNNBL1 chr20 37840102 + Exonic hg38 PCPG TCGA-QR-A70A-01A 2 4 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 98311 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOCAD-HABP4 FOCAD chr9 20789608 + HABP4 chr9 96488089 + Exonic hg38 PCPG TCGA-QR-A70C-01A 1 3 In-Frame Intra-chr p21.3 q22.32 98312 ChimerSeq TCGA FAWG TCGA_RNA-Seq APPBP2-RAB5C APPBP2 chr17 60494466 - RAB5C chr17 42128800 - Exonic hg38 PCPG TCGA-QR-A70G-01B 27 67 In-Frame Intra-chr q23.2 q21.2 Seq+ 98313 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF21A-TTC25 PHF21A chr11 46076754 - TTC25 chr17 41964993 + Exonic hg38 PCPG TCGA-QR-A70G-01B 8 79 Out-of-frame Inter-chr p11.2 Transcription factor q21.2 Seq+ 98314 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNDC3A-C14orf159 FNDC3A chr13 48976917 + C14orf159 chr14 91167225 + Exonic hg38 PCPG TCGA-QR-A70G-01B 2 7 Out-of-frame Inter-chr q14.2 q32.11 Seq+ 98315 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF21A-CNP PHF21A chr11 46076754 - CNP chr17 41968068 + Exonic hg38 PCPG TCGA-QR-A70G-01B 1 7 In-Frame Inter-chr p11.2 Transcription factor q21.2 Seq+ 98316 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-PHF21A BCAS3 chr17 60684036 + PHF21A chr11 46092223 - Exonic hg38 PCPG TCGA-QR-A70G-01B 1 2 CDS-5'UTR Inter-chr q23.2 p11.2 Transcription factor Seq+ 98317 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBTF-MAML3 UBTF chr17 44209352 - MAML3 chr4 139890967 - Exonic hg38 PCPG TCGA-QR-A70H-01A 4 11 In-Frame Inter-chr q21.31 q31.1 Seq+ 98318 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAML3-GPATCH8 MAML3 chr4 139889357 - GPATCH8 chr17 44406051 - Exonic hg38 PCPG TCGA-QR-A70H-01A 1 2 In-Frame Inter-chr q31.1 q21.31 Seq+ 98319 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAM16-PITPNM3 PAM16 chr16 4351232 - PITPNM3 chr17 6484292 - Exonic hg38 PCPG TCGA-QR-A70I-01A 6 14 5'UTR-CDS Inter-chr p13.3 p13.1 Seq+ 98320 ChimerSeq TCGA FAWG TCGA_RNA-Seq EML1-MEG3 EML1 chr14 99897294 + MEG3 chr14 100845458 + Exonic hg38 PCPG TCGA-QR-A70J-01A 44 130 CDS-5'UTR Intra-chr q32.2 q32.2 Tumor suppressor gene Seq+ 98321 ChimerSeq TCGA FAWG TCGA_RNA-Seq EML1-MEG8 EML1 chr14 99897294 + MEG8 chr14 100845458 + Exonic hg38 PCPG TCGA-QR-A70J-01A 44 83 CDS-5'UTR Intra-chr q32.2 q32.2 98322 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF251-COMMD5 ZNF251 chr8 144753683 - COMMD5 chr8 144841743 - Exonic hg38 PCPG TCGA-QR-A70X-01A 3 8 5'UTR-3'UTR Intra-chr Transcription factor q24.3 98323 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM33-SHC1 TRIM33 chr1 114420380 - SHC1 chr1 154970199 - Exonic hg38 PCPG TCGA-QR-A70X-01A 1 6 CDS-5'UTR Intra-chr p13.2 Oncogene q21.3 Seq+ 98324 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICAL3-PTGER3 MICAL3 chr22 18001393 - PTGER3 chr1 70852859 - Exonic hg38 PCPG TCGA-QT-A5XJ-01A 23 147 5'UTR-CDS Inter-chr q11.21 p31.1 Seq+ 98325 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSIP1-TBL1X PSIP1 chr9 15486006 - TBL1X chrX 9653545 + Exonic hg38 PCPG TCGA-QT-A5XJ-01A 11 37 CDS-5'UTR Inter-chr p22.3 Oncogene p22.31 Seq+ 98326 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOCT-MGST2 NOCT chr4 139016171 + MGST2 chr4 139678543 + Exonic hg38 PCPG TCGA-QT-A5XJ-01A 6 28 In-Frame Intra-chr q31.1 q31.1 98327 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPPL3-B3GALT4 SPPL3 chr12 120903845 - B3GALT4 chr6 33284346 + Exonic hg38 PCPG TCGA-QT-A5XJ-01A 6 7 CDS-3'UTR Inter-chr q24.31 p21.32 98328 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNAPC3-FOCAD SNAPC3 chr9 15461805 + FOCAD chr9 20923660 + Exonic hg38 PCPG TCGA-QT-A5XJ-01A 3 8 5'UTR-CDS Intra-chr p22.3 p21.3 98329 ChimerSeq TCGA FAWG TCGA_RNA-Seq B3GALT4-SPPL3 B3GALT4 chr6 33279000 + SPPL3 chr12 120810886 - Exonic hg38 PCPG TCGA-QT-A5XJ-01A 3 6 3'UTR-CDS Inter-chr p21.32 q24.31 98330 ChimerSeq TCGA FAWG TCGA_RNA-Seq CIPC-NGFR CIPC chr14 77098361 + NGFR chr17 49502063 + Exonic hg38 PCPG TCGA-QT-A5XN-01A 9 20 5'UTR-CDS Inter-chr q24.3 q21.33 Tumor suppressor gene 98331 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAAM1-HS6ST3 DAAM1 chr14 59188768 + HS6ST3 chr13 96755855 + Exonic hg38 PCPG TCGA-QT-A5XN-01A 3 18 5'UTR-CDS Inter-chr q23.1 q32.1 Seq+ 98332 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC39A-FGGY TTC39A chr1 51321721 - FGGY chr1 59512311 + Exonic hg38 PCPG TCGA-QT-A5XN-01A 4 12 Out-of-frame Intra-chr p32.3 p32.1 Seq+ 98333 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEGF9-TTLL5 MEGF9 chr9 120713758 - TTLL5 chr14 75764615 + Exonic hg38 PCPG TCGA-QT-A5XN-01A 3 14 Out-of-frame Inter-chr q33.2 q24.3 Seq+ 98334 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREB5-APH1A CREB5 chr7 28724332 + APH1A chr1 150269329 - Exonic hg38 PCPG TCGA-QT-A5XO-01A 23 73 CDS-5'UTR Inter-chr p15.1 Transcription factor q21.2 Seq+ 98335 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN9-FGD4 TSPAN9 chr12 3201256 + FGD4 chr12 32644594 + Exonic hg38 PCPG TCGA-QT-A5XO-01A 9 72 CDS-3'UTR Intra-chr p13.33 p11.21 Seq+ 98336 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT6-RPL39 SEPT6 chrX 119629318 - RPL39 chrX 119790011 - Exonic hg38 PCPG TCGA-QT-A5XO-01A 13 50 Out-of-frame Intra-chr q24 q24 Seq+ 98337 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT6-UPF3B SEPT6 chrX 119629318 - UPF3B chrX 119807581 - Exonic hg38 PCPG TCGA-QT-A5XO-01A 6 50 Out-of-frame Intra-chr q24 q24 98338 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP35-PGPEP1L ARHGAP35 chr19 46937408 + PGPEP1L chr15 98969651 - Exonic hg38 PCPG TCGA-QT-A5XO-01A 3 26 Out-of-frame Inter-chr q13.32 Transcription factor q26.3 Seq+ 98339 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN9-DNM1L TSPAN9 chr12 3201256 + DNM1L chr12 32701415 + Exonic hg38 PCPG TCGA-QT-A5XO-01A 3 19 In-Frame Intra-chr p13.33 p11.21 Seq+ 98340 ChimerSeq TCGA FAWG TCGA_RNA-Seq NBEA-COLGALT2 NBEA chr13 35472536 + COLGALT2 chr1 183978520 - Exonic hg38 PCPG TCGA-QT-A5XO-01A 3 10 Out-of-frame Inter-chr q13.3 q25.3 Seq+ 98341 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A13-SH2D3C SLC25A13 chr7 96184277 - SH2D3C chr9 127741959 - Exonic hg38 PCPG TCGA-QT-A5XO-01A 2 10 Out-of-frame Inter-chr q21.3 q34.11 Seq+ 98342 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNAB1-LRTM1 KCNAB1 chr3 156515220 + LRTM1 chr3 54918892 - Exonic hg38 PCPG TCGA-QT-A5XO-01A 1 4 In-Frame Intra-chr q25.31 p14.3 Seq+ 98343 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM2-MIPOL1 PUM2 chr2 20307978 - MIPOL1 chr14 37499908 + Exonic hg38 PCPG TCGA-QT-A5XP-01A 4 17 Out-of-frame Inter-chr p24.1 q13.3 Seq+ 98344 ChimerSeq TCGA FAWG TCGA_RNA-Seq RGS4-DLK1 RGS4 chr1 163076540 + DLK1 chr14 100734313 + Exonic hg38 PCPG TCGA-QT-A7U0-01A 1000 1000 Out-of-frame Inter-chr q23.3 q32.2 Tumor suppressor gene 98345 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC6A17-IGF2 SLC6A17 chr1 110200800 + IGF2 chr11 2132078 - Exonic hg38 PCPG TCGA-QT-A7U0-01A 1000 1000 Out-of-frame Inter-chr p13.3 p15.5 Oncogene 98346 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB20-FOCAD ZBTB20 chr3 114900304 - FOCAD chr9 20916893 + Exonic hg38 PCPG TCGA-RT-A6YC-01A 15 51 5'UTR-CDS Inter-chr q13.31 Transcription factor p21.3 Seq+ 98347 ChimerSeq TCGA FAWG TCGA_RNA-Seq SORBS2-PDLIM3 SORBS2 chr4 185775227 - PDLIM3 chr4 185525171 - Exonic hg38 PCPG TCGA-RT-A6YC-01A 13 30 5'UTR-CDS Intra-chr q35.1 q35.1 Seq+ 98348 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC17-ATP1A1 ZDHHC17 chr12 76822531 + ATP1A1 chr1 116395110 + Exonic hg38 PCPG TCGA-RT-A6YC-01A 1 9 Out-of-frame Inter-chr q21.2 p13.1 98349 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF21A-TTC25 PHF21A chr11 46076754 - TTC25 chr17 41964993 + Exonic hg38 PCPG TCGA-RW-A67W-01A 1 3 Out-of-frame Inter-chr p11.2 Transcription factor q21.2 Seq+ 98350 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACF1-MSTO2P MACF1 chr1 39105717 + MSTO2P chr1 155746619 + Exonic hg38 PCPG TCGA-RW-A67Y-01A 5 3 CDS-5'UTR Intra-chr p34.3 q22 98351 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPH1-RPA1 DPH1 chr17 2030230 + RPA1 chr17 1842803 + Exonic hg38 PCPG TCGA-RW-A681-01A 1 3 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p13.3 Tumor suppressor gene Seq+ 98352 ChimerSeq TCGA FAWG TCGA_RNA-Seq APIP-S100A13 APIP chr11 34916228 - S100A13 chr1 153626533 - Exonic hg38 PCPG TCGA-RW-A686-01A 7 18 CDS-5'UTR Inter-chr p13 q21.3 Seq+ 98353 ChimerSeq TCGA FAWG TCGA_RNA-Seq BPHL-UQCC2 BPHL chr6 3118847 + UQCC2 chr6 33697750 - Exonic hg38 PCPG TCGA-RW-A686-01A 7 12 Out-of-frame Intra-chr p25.2 p21.31 98354 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBTF-MAML3 UBTF chr17 44210124 - MAML3 chr4 139890967 - Exonic hg38 PCPG TCGA-RW-A686-01A 3 3 In-Frame Inter-chr q21.31 q31.1 Seq+ 98355 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTPBP1-CD101 GTPBP1 chr22 38730881 + CD101 chr1 117025509 + Exonic hg38 PCPG TCGA-RW-A686-01A 1 8 3'UTR-CDS Inter-chr q13.1 p13.1 98356 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K5-NDUFB9 MAP3K5 chr6 136791710 - NDUFB9 chr8 124567647 + Exonic hg38 PCPG TCGA-RW-A686-01A 1 3 CDS-3'UTR Inter-chr q23.3 STE:STE11 q24.13 Seq+ 98357 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP7-MAP3K5 MAP7 chr6 136550342 - MAP3K5 chr6 136583740 - Exonic hg38 PCPG TCGA-RW-A688-01A 13 42 Out-of-frame Intra-chr q23.3 q23.3 STE:STE11 Seq+ 98358 ChimerSeq TCGA FAWG TCGA_RNA-Seq TECTA-FOXN3 TECTA chr11 121130211 + FOXN3 chr14 89162969 - Exonic hg38 PCPG TCGA-RW-A688-01A 2 3 Out-of-frame Inter-chr q23.3 q32.11 Transcription factor Seq+ 98359 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC30A6-ALDH3A2 SLC30A6 chr2 32193983 + ALDH3A2 chr17 19661127 + Exonic hg38 PCPG TCGA-RW-A68A-01A 1 7 Out-of-frame Inter-chr p22.3 p11.2 98360 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNA1C-PIAS4 CACNA1C chr12 2053611 + PIAS4 chr19 4033100 + Exonic hg38 PCPG TCGA-RW-A68B-01A 2 4 3'UTR-CDS Inter-chr p13.33 p13.3 Seq+ 98361 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD3-U2AF1 FRMD3 chr9 83281550 - U2AF1 chr21 43104402 - Exonic hg38 PCPG TCGA-RW-A8AZ-01A 14 27 5'UTR-5'UTR Inter-chr q21.32 q22.3 Oncogene 98362 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBTF-MAML3 UBTF chr17 44210124 - MAML3 chr4 139890967 - Exonic hg38 PCPG TCGA-RW-A8AZ-01A 6 17 In-Frame Inter-chr q21.31 q31.1 Seq+ 98363 ChimerSeq TCGA FAWG TCGA_RNA-Seq EML4-PKDCC EML4 chr2 42169636 + PKDCC chr2 42053239 + Exonic hg38 PCPG TCGA-RW-A8AZ-01A 4 6 Out-of-frame Intra-chr p21 Oncogene p21 Seq+ 98364 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM168A-C5 FAM168A chr11 73597923 - C5 chr9 121046383 - Exonic hg38 PCPG TCGA-RW-A8AZ-01A 1 2 5'UTR-CDS Inter-chr q13.4 q33.2 98365 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1614-XPR1 KIAA1614 chr1 180928573 + XPR1 chr1 180824753 + Exonic hg38 PCPG TCGA-S7-A7WL-01A 13 38 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 98366 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNH2-TMEM176B KCNH2 chr7 150946877 - TMEM176B chr7 150796574 - Exonic hg38 PCPG TCGA-S7-A7WL-01A 1 3 Out-of-frame Intra-chr q36.1 q36.1 98367 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAF3-ITPK1 TRAF3 chr14 102876525 + ITPK1 chr14 92958366 - Exonic hg38 PCPG TCGA-S7-A7WM-01A 42 126 CDS-5'UTR Intra-chr q32.32 Seq+ 98368 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHDC1-ST3GAL3 AHDC1 chr1 27534762 - ST3GAL3 chr1 43898235 + Exonic hg38 PCPG TCGA-S7-A7WM-01A 4 9 3'UTR-CDS Intra-chr p35.3 Transcription factor p34.1 Seq+ 98369 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEZ6L-POMGNT1 SEZ6L chr22 26313902 + POMGNT1 chr1 46197871 - Exonic hg38 PCPG TCGA-S7-A7WM-01A 2 3 CDS-5'UTR Inter-chr q12.1 p34.1 Seq+ 98370 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF91-ASF1B ZNF91 chr19 23395325 - ASF1B chr19 14121708 - Exonic hg38 PCPG TCGA-S7-A7WP-01A 11 42 In-Frame Intra-chr p12 Transcription factor p13.12 Seq+ 98371 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDTC1-FNBP1L WDTC1 chr1 27287861 + FNBP1L chr1 93534705 + Exonic hg38 PCPG TCGA-S7-A7WT-01A 6 9 Out-of-frame Intra-chr p36.11 p22.1 Seq+ 98372 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT18-TH GALNT18 chr11 11372515 - TH chr11 2169871 - Exonic hg38 PCPG TCGA-S7-A7WT-01A 1 5 In-Frame Intra-chr p15.4 p15.5 98373 ChimerSeq TCGA FAWG TCGA_RNA-Seq HS6ST3-ACTR1A HS6ST3 chr13 96091569 + ACTR1A chr10 102481898 - Exonic hg38 PCPG TCGA-SP-A6QF-01A 1 2 Out-of-frame Inter-chr q32.1 q24.32 Seq+ 98374 ChimerSeq TCGA FAWG TCGA_RNA-Seq HAND2-SLC30A9 HAND2 chr4 173528735 - SLC30A9 chr4 42038986 + Exonic hg38 PCPG TCGA-SP-A6QI-01A 180 482 In-Frame Intra-chr q34.1 Transcription factor p13 Seq+ 98375 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLK1-PENK DLK1 chr14 100735046 + PENK chr8 56446734 - Exonic hg38 PCPG TCGA-SQ-A6I4-01A 1000 1000 Out-of-frame Inter-chr q32.2 Tumor suppressor gene q12.1 98376 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A11-SLC6A4 SLC39A11 chr17 72947752 - SLC6A4 chr17 30211424 - Exonic hg38 PCPG TCGA-SR-A6MP-01A 4 68 In-Frame Intra-chr q25.1 q11.2 Seq+ 98377 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDC2-C8orf88 SDC2 chr8 96494331 + C8orf88 chr8 90980461 - Exonic hg38 PCPG TCGA-SR-A6MP-01A 5 20 CDS-5'UTR Intra-chr q22.1 q21.3 98378 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEGR1-NSF NEGR1 chr1 72282319 - NSF chr17 46674414 + Exonic hg38 PCPG TCGA-SR-A6MP-01A 5 9 CDS-3'UTR Inter-chr p31.1 98379 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFR3A-SLFN12L EFR3A chr8 131946633 + SLFN12L chr17 35478185 - Exonic hg38 PCPG TCGA-SR-A6MP-01A 4 8 Out-of-frame Inter-chr q24.22 q12 Seq+ 98380 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGK-CSGALNACT1 PIGK chr1 77206640 - CSGALNACT1 chr8 19506130 - Exonic hg38 PCPG TCGA-SR-A6MP-01A 3 6 CDS-5'UTR Inter-chr p31.1 p21.3 Seq+ 98381 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF2-TEKT3 SMURF2 chr17 64586086 - TEKT3 chr17 15331614 - Exonic hg38 PCPG TCGA-SR-A6MP-01A 3 3 CDS-5'UTR Intra-chr q24.1 p12 Seq+ 98382 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP33-CDK12 USP33 chr1 77759643 - CDK12 chr17 39470882 + Exonic hg38 PCPG TCGA-SR-A6MP-01A 2 6 5'UTR-CDS Inter-chr p31.1 Tumor suppressor gene q12 Oncogene Seq+ 98383 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A11-HTT SLC39A11 chr17 72947752 - HTT chr17 30211424 - Exonic hg38 PCPG TCGA-SR-A6MP-01A 1000 1000 CDS-3'UTR Intra-chr q25.1 p16.3 98384 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP1B-NDFIP1 MAP1B chr5 72115799 + NDFIP1 chr5 142131808 + Exonic hg38 PCPG TCGA-SR-A6MR-01A 2 6 Out-of-frame Intra-chr q13.2 q31.3 Seq+ 98385 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPY-IGF2 NPY chr7 24289580 + IGF2 chr11 2129298 - Exonic hg38 PCPG TCGA-SR-A6MS-01A 3 30 Out-of-frame Inter-chr p15.3 p15.5 Oncogene Seq+ 98386 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC18A2-IGF2 SLC18A2 chr10 117244167 + IGF2 chr11 2131710 - Exonic hg38 PCPG TCGA-SR-A6MS-01A 1000 1000 Out-of-frame Inter-chr q25.3 p15.5 Oncogene 98387 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRN-IGF2 PTPRN chr2 219289769 - IGF2 chr11 2130467 - Exonic hg38 PCPG TCGA-SR-A6MS-01A 1000 1000 Out-of-frame Inter-chr q35 p15.5 Oncogene 98388 ChimerSeq TCGA FAWG TCGA_RNA-Seq APLP1-DBH APLP1 chr19 35874869 + DBH chr9 133658316 + Exonic hg38 PCPG TCGA-SR-A6MT-01A 1 1 In-Frame Inter-chr q13.12 q34.2 98389 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF483-DNAJC25 ZNF483 chr9 111525262 + DNAJC25 chr9 111642839 + Exonic hg38 PCPG TCGA-SR-A6MT-01A 1 1 5'UTR-5'UTR Intra-chr q31.3 Transcription factor q31.3 98390 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYT2-KDM5B SYT2 chr1 202710258 - KDM5B chr1 202731939 - Exonic hg38 PCPG TCGA-TT-A6YJ-01A 1 27 5'UTR-CDS Intra-chr q32.1 q32.1 Transcription factor Seq+ 98391 ChimerSeq TCGA FAWG TCGA_RNA-Seq GFRA3-TTC8 GFRA3 chr5 138253287 - TTC8 chr14 88875026 + Exonic hg38 PCPG TCGA-TT-A6YN-01A 76 690 In-Frame Inter-chr q31.2 q31.3 Seq+ 98392 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC6A-LIX1L TNRC6A chr16 24797966 + LIX1L chr1 145942853 - Exonic hg38 PCPG TCGA-TT-A6YN-01A 14 25 Out-of-frame Inter-chr p12.1 q21.1 Seq+ 98393 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP17A1-MTATP6P1 CYP17A1 chr10 102830630 - MTATP6P1 chr1 633988 + Exonic hg38 PCPG TCGA-TT-A6YO-01A 3 6 Out-of-frame Inter-chr q24.32 p36.33 Seq+ 98394 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3R1-GINS3 PIK3R1 chr5 68227009 + GINS3 chr16 58386621 + Exonic hg38 PCPG TCGA-W2-A7HB-01A 6 34 CDS-5'UTR Inter-chr q13.1 Oncogene q21 Seq+ 98395 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARL8B-CLASP2 ARL8B chr3 5122588 + CLASP2 chr3 33696933 - Exonic hg38 PCPG TCGA-W2-A7HB-01A 6 14 In-Frame Intra-chr p26.1 p22.3 Seq+ 98396 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPAP3-SYT1 RPAP3 chr12 47696276 - SYT1 chr12 79353502 + Exonic hg38 PCPG TCGA-W2-A7HB-01A 1 4 Out-of-frame Intra-chr q13.11 q21.2 98397 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOCS5-ADCY2 SOCS5 chr2 46699449 + ADCY2 chr5 7520738 + Exonic hg38 PCPG TCGA-W2-A7HC-01A 10 14 5'UTR-CDS Inter-chr p21 p15.31 Seq+ 98398 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF216-RSPH10B2 RNF216 chr7 5739276 - RSPH10B2 chr7 6798363 + Exonic hg38 PCPG TCGA-W2-A7HD-01A 6 9 In-Frame Intra-chr p22.1 p22.1 Seq+ 98399 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBTF-MAML3 UBTF chr17 44209352 - MAML3 chr4 139890967 - Exonic hg38 PCPG TCGA-WB-A80K-01A 24 70 In-Frame Inter-chr q21.31 q31.1 Seq+ 98400 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAML3-FAM171A2 MAML3 chr4 140152860 - FAM171A2 chr17 44356588 - Exonic hg38 PCPG TCGA-WB-A80K-01A 6 53 Out-of-frame Inter-chr q31.1 q21.31 Seq+ 98401 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGRN1-RNPS1 MGRN1 chr16 4625048 + RNPS1 chr16 2264760 - Exonic hg38 PCPG TCGA-WB-A80K-01A 8 15 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 98402 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4B-PHYHIPL KDM4B chr19 5082504 + PHYHIPL chr10 59245057 + Exonic hg38 PCPG TCGA-WB-A80M-01A 32 122 Out-of-frame Inter-chr p13.3 q21.1 Seq+ 98403 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF4-MAML3 TCF4 chr18 55254497 - MAML3 chr4 139890967 - Exonic hg38 PCPG TCGA-WB-A80Y-01A 11 38 In-Frame Inter-chr q21.2 Tumor suppressor gene Transcription factor q31.1 Seq+ 98404 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF7L2-MAML3 TCF7L2 chr18 55254497 - MAML3 chr4 139890967 - Exonic hg38 PCPG TCGA-WB-A80Y-01A 1000 1000 5'UTR-CDS Inter-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q31.1 98405 ChimerSeq TCGA FAWG TCGA_RNA-Seq CC2D1A-ZMYND8 CC2D1A chr19 13919202 + ZMYND8 chr20 47310204 - Exonic hg38 PCPG TCGA-WB-A818-01A 4 11 In-Frame Inter-chr p13.12 Transcription factor q13.12 Seq+ 98406 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGAPA2-BSCL2 RALGAPA2 chr20 20629363 - BSCL2 chr11 62694711 - Exonic hg38 PCPG TCGA-WB-A81D-01A 26 102 In-Frame Inter-chr p11.23 q12.3 Seq+ 98407 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM178B-DPP6 TMEM178B chr7 141212704 + DPP6 chr7 154769417 + Exonic hg38 PCPG TCGA-WB-A81D-01A 15 107 In-Frame Intra-chr q34 Seq+ 98408 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSH2-SLCO6A1 MSH2 chr2 47445657 + SLCO6A1 chr5 102373494 - Exonic hg38 PCPG TCGA-WB-A81D-01A 6 19 Out-of-frame Inter-chr p21 Oncogene Tumor suppressor gene q21.1 Seq+ 98409 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB4-RARA ZBTB4 chr17 7462419 - RARA chr17 40330857 + Exonic hg38 PCPG TCGA-WB-A81E-01A 4 20 5'UTR-5'UTR Intra-chr Tumor suppressor gene Transcription factor q21.2 Oncogene Transcription factor Seq+ 98410 ChimerSeq TCGA FAWG TCGA_RNA-Seq EZH1-PDSS2 EZH1 chr17 42727635 - PDSS2 chr6 107274227 - Exonic hg38 PCPG TCGA-WB-A81F-01A 8 23 Out-of-frame Inter-chr q21.2 Tumor suppressor gene q21 Tumor suppressor gene Seq+ 98411 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-ABRACL FBXL20 chr17 39343180 - ABRACL chr6 139034155 + Exonic hg38 PCPG TCGA-WB-A81F-01A 4 24 CDS-5'UTR Inter-chr q12 q24.1 Seq+ 98412 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBFOX2-MB RBFOX2 chr22 35938847 - MB chr22 35637208 - Exonic hg38 PCPG TCGA-WB-A81F-01A 5 16 5'UTR-5'UTR Intra-chr q12.3 98413 ChimerSeq TCGA FAWG TCGA_RNA-Seq OPRD1-PTP4A2 OPRD1 chr1 28812610 + PTP4A2 chr1 31919658 - Exonic hg38 PCPG TCGA-WB-A81F-01A 4 9 CDS-5'UTR Intra-chr p35.3 p35.2 Seq+ 98414 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNC5B-IGF2 UNC5B chr10 71300064 + IGF2 chr11 2132777 - Exonic hg38 PCPG TCGA-WB-A81F-01A 1000 1000 Out-of-frame Inter-chr q22.1 Tumor suppressor gene p15.5 Oncogene 98415 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMPD3-ANKH AMPD3 chr11 10501590 + ANKH chr5 14711310 - Exonic hg38 PCPG TCGA-WB-A81H-01A 15 39 In-Frame Inter-chr p15.4 p15.2 Seq+ 98416 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYB561-GNAS CYB561 chr17 63440727 - GNAS chr20 58895612 + Exonic hg38 PCPG TCGA-WB-A81I-01A 1 9 5'UTR-5'UTR Inter-chr q23.3 q13.32 Oncogene 98417 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM5B-ITPKB KDM5B chr1 202773118 - ITPKB chr1 226648771 - Exonic hg38 PCPG TCGA-WB-A81J-01A 8 33 In-Frame Intra-chr q32.1 Transcription factor q42.12 Seq+ 98418 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARMC9-SSR2 ARMC9 chr2 231296253 + SSR2 chr1 156018368 - Exonic hg38 PCPG TCGA-WB-A81J-01A 2 17 Out-of-frame Inter-chr q37.1 q22 Seq+ 98419 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPE-PRDM5 RPE chr2 210002783 + PRDM5 chr4 120821345 - Exonic hg38 PCPG TCGA-WB-A81J-01A 1 9 Out-of-frame Inter-chr q34 q27 Tumor suppressor gene Transcription factor Seq+ 98420 ChimerSeq TCGA FAWG TCGA_RNA-Seq NVL-C2orf72 NVL chr1 224330071 - C2orf72 chr2 231041296 + Exonic hg38 PCPG TCGA-WB-A81J-01A 1 7 Out-of-frame Inter-chr q42.11 q37.1 Seq+ 98421 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAML2-BCAS4 MAML2 chr11 96091892 - BCAS4 chr20 50841766 + Exonic hg38 PCPG TCGA-WB-A81K-01A 1 13 In-Frame Inter-chr q21 Oncogene q13.13 Seq+ 98422 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST3GAL3-GLCCI1 ST3GAL3 chr1 43736380 + GLCCI1 chr7 8084897 + Exonic hg38 PCPG TCGA-WB-A81P-01A 5 27 In-Frame Inter-chr p34.1 p21.3 Seq+ 98423 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIP12-SLC16A14 TRIP12 chr2 229858772 - SLC16A14 chr2 230037531 - Exonic hg38 PCPG TCGA-WB-A81S-01A 7 24 In-Frame Intra-chr q36.3 q36.3 Seq+ 98424 ChimerSeq TCGA FAWG TCGA_RNA-Seq LTBP4-POU2F2 LTBP4 chr19 40600177 + POU2F2 chr19 42160392 - Exonic hg38 PCPG TCGA-WB-A81S-01A 2 16 CDS-5'UTR Intra-chr q13.2 q13.2 Transcription factor 98425 ChimerSeq TCGA FAWG TCGA_RNA-Seq RGS4-SERPINF2 RGS4 chr1 163069528 + SERPINF2 chr17 1744992 + Exonic hg38 PCPG TCGA-WB-A81S-01A 1 9 CDS-3'UTR Inter-chr q23.3 p13.3 Seq+ 98426 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPP6-GGNBP2 DPP6 chr7 154475037 + GGNBP2 chr17 36581344 + Exonic hg38 PCPG TCGA-WB-A81W-01A 13 26 3'UTR-3'UTR Inter-chr Tumor suppressor gene Seq+ 98427 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN21-EML5 PTPN21 chr14 88496413 - EML5 chr14 88644511 - Exonic hg38 PCPG TCGA-WB-A81W-01A 4 3 In-Frame Intra-chr q31.3 q31.3 Seq+ 98428 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNB4-YWHAZ CACNB4 chr2 151971545 - YWHAZ chr8 100925039 - Exonic hg38 PCPG TCGA-WB-A81W-01A 3 2 In-Frame Inter-chr q23.3 q22.3 98429 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRIP1-NR2E3 GRIP1 chr12 66539078 - NR2E3 chr15 71807018 + Exonic hg38 PCPG TCGA-WB-A81W-01A 3 2 CDS-5'UTR Inter-chr q14.3 q23 Transcription factor Seq+ 98430 ChimerSeq TCGA FAWG TCGA_RNA-Seq EP400-DPYSL5 EP400 chr12 131994956 + DPYSL5 chr2 26898496 + Exonic hg38 PCPG TCGA-WB-A81W-01A 1 5 CDS-5'UTR Inter-chr q24.33 Oncogene p23.3 Seq+ 98431 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-EZH2 NF1 chr17 31265339 + EZH2 chr7 148847305 - Exonic hg38 PCPG TCGA-WB-A820-01A 8 8 CDS-5'UTR Inter-chr q11.2 Oncogene Tumor suppressor gene q36.1 Oncogene Tumor suppressor gene Seq+ 98432 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKHD1-SLC4A9 ANKHD1 chr5 140402273 + SLC4A9 chr5 140361808 + Exonic hg38 PCPG TCGA-WB-A820-01A 2 10 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 98433 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCORL1-UTP14A BCORL1 chrX 130039282 + UTP14A chrX 129907367 + Exonic hg38 PCPG TCGA-WB-A820-01A 2 4 Out-of-frame Intra-chr q26.1 Tumor suppressor gene q26.1 Seq+ 98434 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLGA4-ACAA1 GOLGA4 chr3 37273601 + ACAA1 chr3 38103793 - Exonic hg38 PRAD TCGA-2A-A8VL-01A 7 89 CDS-3'UTR Intra-chr p22.2 p22.2 Seq+ 98435 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM2-MTFR1L PUM2 chr2 20350597 - MTFR1L chr1 25831921 + Exonic hg38 PRAD TCGA-2A-A8VL-01A 9 44 5'UTR-CDS Inter-chr p24.1 p36.11 Seq+ 98436 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND5A-SCUBE2 DENND5A chr11 9150081 - SCUBE2 chr11 9021955 - Exonic hg38 PRAD TCGA-2A-A8VL-01A 3 4 Out-of-frame Intra-chr p15.4 p15.4 Tumor suppressor gene Seq+ 98437 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF69-CFAP52 ZNF69 chr19 11887986 + CFAP52 chr17 9628672 + Exonic hg38 PRAD TCGA-2A-A8VL-01A 2 5 Out-of-frame Inter-chr p13.2 Transcription factor p13.1 98438 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR20-LRP10 WDR20 chr14 102140172 + LRP10 chr14 22872738 + Exonic hg38 PRAD TCGA-2A-A8VT-01A 11 45 Out-of-frame Intra-chr q32.31 q11.2 Seq+ 98439 ChimerSeq TCGA FAWG TCGA_RNA-Seq GCN1-METTL1 GCN1 chr12 120194680 - METTL1 chr12 57771257 - Exonic hg38 PRAD TCGA-2A-A8VT-01A 7 0 Out-of-frame Intra-chr q24.23 q14.1 98440 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2C-NDUFAF4 KMT2C chr7 152157761 - NDUFAF4 chr6 96896847 - Exonic hg38 PRAD TCGA-2A-A8VT-01A 4 9 Out-of-frame Inter-chr q36.1 Oncogene Tumor suppressor gene q16.1 Seq+ 98441 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABHD17A-TCF3 ABHD17A chr19 1881235 - TCF3 chr19 1646427 - Exonic hg38 PRAD TCGA-2A-A8VT-01A 2 11 Out-of-frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Transcription factor Seq+ 98442 ChimerSeq TCGA FAWG TCGA_RNA-Seq RERE-ZNF345 RERE chr1 8422727 - ZNF345 chr19 36876785 + Exonic hg38 PRAD TCGA-2A-A8VT-01A 3 7 5'UTR-5'UTR Inter-chr p36.23 q13.12 Transcription factor Seq+ 98443 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLPP1-CNTLN PLPP1 chr5 55534572 - CNTLN chr9 17484295 + Exonic hg38 PRAD TCGA-2A-A8VV-01A 29 75 Out-of-frame Inter-chr q11.2 p22.2 98444 ChimerSeq TCGA FAWG TCGA_RNA-Seq BDP1-LINS1 BDP1 chr5 71458855 + LINS1 chr15 100575128 - Exonic hg38 PRAD TCGA-2A-A8VV-01A 1 6 3'UTR-3'UTR Inter-chr q26.3 98445 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWC1-FMN2 WWC1 chr5 168371533 + FMN2 chr1 240177921 + Exonic hg38 PRAD TCGA-2A-A8VX-01A 11 27 Out-of-frame Inter-chr q34 q43 Seq+ 98446 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOB2-MRPS18B TOB2 chr22 41446379 - MRPS18B chr6 30624883 + Exonic hg38 PRAD TCGA-2A-A8W1-01A 95 270 5'UTR-3'UTR Inter-chr q13.2 Seq+ 98447 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3GLB2-GTSE1 SH3GLB2 chr9 129028092 - GTSE1 chr22 46326436 + Exonic hg38 PRAD TCGA-2A-A8W1-01A 17 34 Out-of-frame Inter-chr q34.11 q13.31 Seq+ 98448 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2E2-ZNF385D UBE2E2 chr3 23217312 + ZNF385D chr3 21665028 - Exonic hg38 PRAD TCGA-2A-A8W1-01A 10 30 Out-of-frame Intra-chr p24.3 p24.3 Transcription factor Seq+ 98449 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST7-PTPRZ1 ST7 chr7 116953691 + PTPRZ1 chr7 121928156 + Exonic hg38 PRAD TCGA-2A-A8W1-01A 7 28 In-Frame Intra-chr q31.2 Tumor suppressor gene q31.32 Seq+ 98450 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM114A1-KCNIP4 FAM114A1 chr4 38868546 + KCNIP4 chr4 21763032 - Exonic hg38 PRAD TCGA-2A-A8W1-01A 3 15 5'UTR-5'UTR Intra-chr p14 p15.2 Seq+ 98451 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMS-PPARGC1A SMS chrX 21940873 + PPARGC1A chr4 23884931 - Exonic hg38 PRAD TCGA-2A-A8W1-01A 2 4 Out-of-frame Inter-chr p22.11 p15.2 Seq+ 98452 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASTN2-CC2D1A ASTN2 chr9 116725771 - CC2D1A chr19 13918070 + Exonic hg38 PRAD TCGA-2A-A8W1-01A 2 3 In-Frame Inter-chr q33.1 p13.12 Transcription factor 98453 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-BRCA1 NF1 chr17 31326252 + BRCA1 chr17 43063951 - Exonic hg38 PRAD TCGA-2A-A8W1-01A 1 6 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q21.31 Oncogene Tumor suppressor gene Seq+ 98454 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-EPHA1 NF1 chr17 31337880 + EPHA1 chr7 143391775 - Exonic hg38 PRAD TCGA-2A-A8W1-01A 1 6 CDS-5'UTR Inter-chr q11.2 Oncogene Tumor suppressor gene q35 Tumor suppressor gene 98455 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRCA1-NF1 BRCA1 chr17 43047643 - NF1 chr17 31327499 + Exonic hg38 PRAD TCGA-2A-A8W1-01A 1 5 Out-of-frame Intra-chr q21.31 Oncogene Tumor suppressor gene q11.2 Oncogene Tumor suppressor gene Seq+ 98456 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRMU-EMC1 TRMU chr22 46331732 + EMC1 chr1 19245030 - Exonic hg38 PRAD TCGA-2A-A8W1-01A 1 5 5'UTR-CDS Inter-chr q13.31 p36.13 98457 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205680394 - ETV1 chr7 13939246 - Exonic hg38 PRAD TCGA-2A-A8W3-01A 301 1142 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 98458 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPF2-RAMP2 WIPF2 chr17 40219492 + RAMP2 chr17 42758447 + Exonic hg38 PRAD TCGA-2A-A8W3-01A 17 61 5'UTR-5'UTR Intra-chr q21.2 q21.2 Seq+ 98459 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATAD2B-KCNN3 GATAD2B chr1 153922733 - KCNN3 chr1 154772393 - Exonic hg38 PRAD TCGA-2A-A8W3-01A 14 53 5'UTR-CDS Intra-chr Transcription factor q21.3 Seq+ 98460 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALG12-CDT1 ALG12 chr22 49918263 - CDT1 chr16 88807051 + Exonic hg38 PRAD TCGA-2A-A8W3-01A 11 56 5'UTR-CDS Inter-chr q13.33 q24.3 Seq+ 98461 ChimerSeq TCGA FAWG TCGA_RNA-Seq PER1-ENOPH1 PER1 chr17 8142649 - ENOPH1 chr4 82447920 + Exonic hg38 PRAD TCGA-2A-A8W3-01A 4 29 Out-of-frame Inter-chr p13.1 Oncogene q21.22 Seq+ 98462 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP43-TMEM116 USP43 chr17 9656534 + TMEM116 chr12 111934030 - Exonic hg38 PRAD TCGA-2A-A8W3-01A 3 8 In-Frame Inter-chr p13.1 q24.13 Seq+ 98463 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNLL1-RNF10 DYNLL1 chr12 120470104 + RNF10 chr12 120575631 + Exonic hg38 PRAD TCGA-2A-A8W3-01A 3 0 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 98464 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2IRD1-CCDC146 GTF2IRD1 chr7 74454176 + CCDC146 chr7 77167658 + Exonic hg38 PRAD TCGA-2A-A8W3-01A 1 1 5'UTR-5'UTR Intra-chr q11.23 Transcription factor q11.23 Seq+ 98465 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG2A-LBHD1 ATG2A chr11 64896462 - LBHD1 chr11 62669803 - Exonic hg38 PRAD TCGA-2A-AAYF-01A 1 11 In-Frame Intra-chr q13.1 q12.3 98466 ChimerSeq TCGA FAWG TCGA_RNA-Seq EP400NL-ATF7IP EP400NL chr12 132090943 + ATF7IP chr12 14496231 + Exonic hg38 PRAD TCGA-2A-AAYU-01A 3 13 Out-of-frame Intra-chr q24.33 p13.1 Seq+ 98467 ChimerSeq TCGA FAWG TCGA_RNA-Seq VDAC2-NEO1 VDAC2 chr10 75211189 + NEO1 chr15 73116540 + Exonic hg38 PRAD TCGA-2A-AAYU-01A 2 17 In-Frame Inter-chr q22.2 q24.1 Seq+ 98468 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGM1-SLC16A12 PGM1 chr1 63593734 + SLC16A12 chr10 89462624 - Exonic hg38 PRAD TCGA-2A-AAYU-01A 2 5 CDS-5'UTR Inter-chr p31.3 q23.31 Seq+ 98469 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACP6-INTS7 ACP6 chr1 147648246 - INTS7 chr1 212017023 - Exonic hg38 PRAD TCGA-2A-AAYU-01A 1 5 Out-of-frame Intra-chr q21.2 q32.3 Seq+ 98470 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM178B-LHPP TMEM178B chr7 141212704 + LHPP chr10 124484139 + Exonic hg38 PRAD TCGA-2A-AAYU-01A 1 5 Out-of-frame Inter-chr q34 q26.13 98471 ChimerSeq TCGA FAWG TCGA_RNA-Seq SORBS2-MRPS35 SORBS2 chr4 185649467 - MRPS35 chr12 27755181 + Exonic hg38 PRAD TCGA-4L-AA1F-01A 21 62 Out-of-frame Inter-chr q35.1 p11.22 Seq+ 98472 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPECC1L-CPNE4 SPECC1L chr22 24270983 + CPNE4 chr3 132284170 - Exonic hg38 PRAD TCGA-4L-AA1F-01A 6 48 5'UTR-5'UTR Inter-chr q11.23 q22.1 Seq+ 98473 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC9A9-PDLIM3 SLC9A9 chr3 143795001 - PDLIM3 chr4 185506652 - Exonic hg38 PRAD TCGA-4L-AA1F-01A 7 20 In-Frame Inter-chr q24 q35.1 Seq+ 98474 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACPP-BCR ACPP chr3 132337554 + BCR chr22 23311697 + Exonic hg38 PRAD TCGA-4L-AA1F-01A 3 11 Out-of-frame Inter-chr q22.1 q11.23 Atypical:BCR Oncogene Tumor suppressor gene 98475 ChimerSeq TCGA FAWG TCGA_RNA-Seq C16orf74-ATAD1 C16orf74 chr16 85735190 - ATAD1 chr10 87792755 - Exonic hg38 PRAD TCGA-4L-AA1F-01A 1 5 Out-of-frame Inter-chr q24.1 Seq+ 98476 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAP1-CGA SMAP1 chr6 70773425 + CGA chr6 87088207 - Exonic hg38 PRAD TCGA-CH-5737-01A 4 6 CDS-5'UTR Intra-chr q13 q14.3 Seq+ 98477 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM7A-BRAF KDM7A chr7 140111095 - BRAF chr7 140781693 - Exonic hg38 PRAD TCGA-CH-5737-01A 1 11 In-Frame Intra-chr q34 q34 TKL:RAF Oncogene 98478 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGGF1-RAF1 AGGF1 chr5 77039719 + RAF1 chr3 12600415 - Exonic hg38 PRAD TCGA-CH-5737-01A 1 6 In-Frame Inter-chr q13.3 p25.2 TKL:RAF Oncogene Seq+ 98479 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSRP1-TRIP12 RSRP1 chr1 25245150 - TRIP12 chr2 229767750 - Exonic hg38 PRAD TCGA-CH-5737-01A 1 1 Out-of-frame Inter-chr p36.11 q36.3 98480 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIRPA-CWF19L2 SIRPA chr20 1934754 + CWF19L2 chr11 107392895 - Exonic hg38 PRAD TCGA-CH-5738-01A 1 1 In-Frame Inter-chr p13 q22.3 98481 ChimerSeq TCGA FAWG TCGA_RNA-Seq CADM1-SORL1 CADM1 chr11 115504271 - SORL1 chr11 121553937 + Exonic hg38 PRAD TCGA-CH-5739-01A 3 11 In-Frame Intra-chr q23.3 Tumor suppressor gene q24.1 Seq+ 98482 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERG-PLEKHH1 ERG chr21 38575662 - PLEKHH1 chr14 67555825 + Exonic hg38 PRAD TCGA-CH-5739-01A 2 10 In-Frame Inter-chr q22.2 Oncogene Transcription factor q24.1 Seq+ 98483 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPATCH8-PYY GPATCH8 chr17 44503326 - PYY chr17 43966532 - Exonic hg38 PRAD TCGA-CH-5739-01A 1 13 5'UTR-5'UTR Intra-chr q21.31 q21.31 98484 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTF1-EHD4 RTF1 chr15 41457876 + EHD4 chr15 41953940 - Exonic hg38 PRAD TCGA-CH-5739-01A 2 7 In-Frame Intra-chr q15.1 q15.1 Seq+ 98485 ChimerSeq TCGA FAWG TCGA_RNA-Seq HLCS-KIAA1755 HLCS chr21 36896860 - KIAA1755 chr20 38228240 - Exonic hg38 PRAD TCGA-CH-5739-01A 2 6 In-Frame Inter-chr q22.13 q11.23 Seq+ 98486 ChimerSeq TCGA FAWG TCGA_RNA-Seq UHRF1BP1-RIOK1 UHRF1BP1 chr6 34857917 + RIOK1 chr6 7417331 + Exonic hg38 PRAD TCGA-CH-5740-01A 16 40 In-Frame Intra-chr p21.31 p24.3 Atypical:RIO Seq+ 98487 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPD-PIGW CPD chr17 30379726 + PIGW chr17 36537094 + Exonic hg38 PRAD TCGA-CH-5740-01A 11 34 5'UTR-3'UTR Intra-chr q11.2 Tumor suppressor gene q12 Seq+ 98488 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPH2-TMEM27 HNRNPH2 chrX 101412524 + TMEM27 chrX 15639756 - Exonic hg38 PRAD TCGA-CH-5740-01A 8 30 Out-of-frame Intra-chr q22.1 p22.2 Seq+ 98489 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIA-CYP2J2 NFIA chr1 61088680 + CYP2J2 chr1 59893829 - Exonic hg38 PRAD TCGA-CH-5740-01A 3 10 In-Frame Intra-chr p31.3 Transcription factor p32.1 Seq+ 98490 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPTE2P5-LMO7 TPTE2P5 chr13 40826506 - LMO7 chr13 75836397 + Exonic hg38 PRAD TCGA-CH-5740-01A 2 12 3'UTR-CDS Intra-chr q14.11 q22.2 Seq+ 98491 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM13B-CDC25C FAM13B chr5 138032782 - CDC25C chr5 138292116 - Exonic hg38 PRAD TCGA-CH-5740-01A 2 6 5'UTR-CDS Intra-chr q31.2 q31.2 Seq+ 98492 ChimerSeq TCGA FAWG TCGA_RNA-Seq THRAP3-RPN1 THRAP3 chr1 36224505 + RPN1 chr3 128644983 - Exonic hg38 PRAD TCGA-CH-5740-01A 2 6 5'UTR-CDS Inter-chr p34.3 q21.3 Seq+ 98493 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTPS2-TMSB15A CTPS2 chrX 16667514 - TMSB15A chrX 102515180 - Exonic hg38 PRAD TCGA-CH-5740-01A 1 2 CDS-5'UTR Intra-chr p22.2 q22.1 98494 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIST4H4-ERP27 HIST4H4 chr12 14770679 - ERP27 chr12 14917303 - Exonic hg38 PRAD TCGA-CH-5740-01A 1 2 3'UTR-CDS Intra-chr p12.3 p12.3 98495 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIO-IQUB TRIO chr5 14304592 + IQUB chr7 123457566 - Exonic hg38 PRAD TCGA-CH-5741-01A 27 75 In-Frame Inter-chr p15.2 q31.32 Seq+ 98496 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACPP-NPY ACPP chr3 132356855 + NPY chr7 24291663 + Exonic hg38 PRAD TCGA-CH-5741-01A 1 9 Out-of-frame Inter-chr q22.1 p15.3 98497 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFF4-DTWD2 AFF4 chr5 132963259 - DTWD2 chr5 118848218 - Exonic hg38 PRAD TCGA-CH-5744-01A 15 60 5'UTR-CDS Intra-chr q31.1 q23.1 Seq+ 98498 ChimerSeq TCGA FAWG TCGA_RNA-Seq COX14-LIMA1 COX14 chr12 50112301 + LIMA1 chr12 50192561 - Exonic hg38 PRAD TCGA-CH-5744-01A 12 59 5'UTR-CDS Intra-chr q13.12 q13.12 Tumor suppressor gene Seq+ 98499 ChimerSeq TCGA FAWG TCGA_RNA-Seq GFOD2-TMEM241 GFOD2 chr16 67719163 - TMEM241 chr18 23356663 - Exonic hg38 PRAD TCGA-CH-5744-01A 8 22 5'UTR-CDS Inter-chr q22.1 q11.2 Seq+ 98500 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF5-RDH11 DCAF5 chr14 69116366 - RDH11 chr14 67693052 - Exonic hg38 PRAD TCGA-CH-5744-01A 6 25 In-Frame Intra-chr q24.1 q24.1 Seq+ 98501 ChimerSeq TCGA FAWG TCGA_RNA-Seq ECSIT-RGL3 ECSIT chr19 11513056 - RGL3 chr19 11406864 - Exonic hg38 PRAD TCGA-CH-5744-01A 8 16 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 98502 ChimerSeq TCGA FAWG TCGA_RNA-Seq NT5DC1-RDH11 NT5DC1 chr6 116101023 + RDH11 chr14 67692593 - Exonic hg38 PRAD TCGA-CH-5744-01A 4 32 Out-of-frame Inter-chr q22.1 q24.1 Seq+ 98503 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF10-AFDN PHF10 chr6 169710236 - AFDN chr6 167925005 + Exonic hg38 PRAD TCGA-CH-5744-01A 9 11 In-Frame Intra-chr q27 q27 98504 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTWD2-AFF4 DTWD2 chr5 118928537 - AFF4 chr5 132899141 - Exonic hg38 PRAD TCGA-CH-5744-01A 3 8 In-Frame Intra-chr q23.1 q31.1 98505 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPHA7-PIGH EPHA7 chr6 93356717 - PIGH chr14 67593952 - Exonic hg38 PRAD TCGA-CH-5744-01A 3 7 Out-of-frame Inter-chr q16.1 Oncogene q24.1 98506 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERG-CDHR2 ERG chr21 38575662 - CDHR2 chr5 176565338 + Exonic hg38 PRAD TCGA-CH-5744-01A 3 3 5'UTR-5'UTR Inter-chr q22.2 Oncogene Transcription factor q35.2 Seq+ 98507 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK19-AMD1 CDK19 chr6 110667434 - AMD1 chr6 110887505 + Exonic hg38 PRAD TCGA-CH-5744-01A 1 1 Out-of-frame Intra-chr q21 q21 Seq+ 98508 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPA-STAC2 COPA chr1 160343131 - STAC2 chr17 39218173 - Exonic hg38 PRAD TCGA-CH-5745-01A 11 54 Out-of-frame Inter-chr q23.2 q12 Seq+ 98509 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO42-RSG1 FBXO42 chr1 16352255 - RSG1 chr1 16233764 - Exonic hg38 PRAD TCGA-CH-5745-01A 8 41 Out-of-frame Intra-chr p36.13 p36.13 Seq+ 98510 ChimerSeq TCGA FAWG TCGA_RNA-Seq LUC7L2-ETV1 LUC7L2 chr7 139360322 + ETV1 chr7 13939246 - Exonic hg38 PRAD TCGA-CH-5745-01A 6 32 In-Frame Intra-chr q34 p21.2 Oncogene Transcription factor Seq+ 98511 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRP1B-FAM207A RRP1B chr21 43690440 + FAM207A chr21 44943684 + Exonic hg38 PRAD TCGA-CH-5745-01A 4 36 In-Frame Intra-chr q22.3 q22.3 Seq+ 98512 ChimerSeq TCGA FAWG TCGA_RNA-Seq YTHDF2-ARSB YTHDF2 chr1 28743986 + ARSB chr5 78781974 - Exonic hg38 PRAD TCGA-CH-5745-01A 3 15 Out-of-frame Inter-chr p35.3 q14.1 Seq+ 98513 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGF2R-AFDN IGF2R chr6 159969395 + AFDN chr6 167864551 + Exonic hg38 PRAD TCGA-CH-5745-01A 4 4 Out-of-frame Intra-chr q25.3 Oncogene Tumor suppressor gene q27 98514 ChimerSeq TCGA FAWG TCGA_RNA-Seq UTRN-MSRA UTRN chr6 144479982 + MSRA chr8 10428148 + Exonic hg38 PRAD TCGA-CH-5746-01A 1 9 CDS-5'UTR Inter-chr q24.2 p23.1 98515 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIST4H4-LRP6 HIST4H4 chr12 14770679 - LRP6 chr12 12203400 - Exonic hg38 PRAD TCGA-CH-5748-01A 7 21 3'UTR-5'UTR Intra-chr p12.3 Seq+ 98516 ChimerSeq TCGA FAWG TCGA_RNA-Seq TYW1-WBSCR17 TYW1 chr7 67117618 + WBSCR17 chr7 71677211 + Exonic hg38 PRAD TCGA-CH-5750-01A 3 17 Out-of-frame Intra-chr q11.21 q11.22 Seq+ 98517 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACSL3-SGPP2 ACSL3 chr2 222861258 + SGPP2 chr2 222521767 + Exonic hg38 PRAD TCGA-CH-5750-01A 5 5 5'UTR-5'UTR Intra-chr q36.1 q36.1 Seq+ 98518 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC23B-KAT14 SEC23B chr20 18515736 + KAT14 chr20 18181710 + Exonic hg38 PRAD TCGA-CH-5750-01A 3 6 In-Frame Intra-chr p11.23 p11.23 98519 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4A-CFAP57 KDM4A chr1 43692311 + CFAP57 chr1 43243227 + Exonic hg38 PRAD TCGA-CH-5750-01A 2 1 Out-of-frame Intra-chr p34.2 p34.2 98520 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNAQ-VEPH1 GNAQ chr9 77794463 - VEPH1 chr3 157265662 - Exonic hg38 PRAD TCGA-CH-5750-01A 1 3 Out-of-frame Inter-chr q21.2 Oncogene q25.32 Seq+ 98521 ChimerSeq TCGA FAWG TCGA_RNA-Seq TARS2-MRPS21 TARS2 chr1 150490725 + MRPS21 chr1 150308048 + Exonic hg38 PRAD TCGA-CH-5750-01A 1 3 In-Frame Intra-chr q21.2 q21.2 Seq+ 98522 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACSL3-SGPP2 ACSL3 chr2 222861258 + SGPP2 chr2 222521767 + Exonic hg38 PRAD TCGA-CH-5751-01A 15 22 5'UTR-5'UTR Intra-chr q36.1 q36.1 Seq+ 98523 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC23B-KAT14 SEC23B chr20 18515736 + KAT14 chr20 18181710 + Exonic hg38 PRAD TCGA-CH-5751-01A 15 22 In-Frame Intra-chr p11.23 p11.23 98524 ChimerSeq TCGA FAWG TCGA_RNA-Seq TARS2-MRPS21 TARS2 chr1 150490725 + MRPS21 chr1 150308048 + Exonic hg38 PRAD TCGA-CH-5751-01A 10 12 In-Frame Intra-chr q21.2 q21.2 Seq+ 98525 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXK1-SDK1 FOXK1 chr7 4682868 + SDK1 chr7 3821450 + Exonic hg38 PRAD TCGA-CH-5751-01A 3 9 In-Frame Intra-chr p22.1 Transcription factor p22.2 Seq+ 98526 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL23-BRD2 RPL23 chr17 38852604 - BRD2 chr6 32971595 + Exonic hg38 PRAD TCGA-CH-5751-01A 4 3 CDS-3'UTR Inter-chr q12 Atypical:BRD Seq+ 98527 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP3B2-HOMER2 AP3B2 chr15 82709594 - HOMER2 chr15 82892841 - Exonic hg38 PRAD TCGA-CH-5751-01A 2 9 In-Frame Intra-chr q25.2 q25.2 Tumor suppressor gene Seq+ 98528 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4A-CFAP57 KDM4A chr1 43692311 + CFAP57 chr1 43243227 + Exonic hg38 PRAD TCGA-CH-5751-01A 1 12 Out-of-frame Intra-chr p34.2 p34.2 98529 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIRLET7BHG-WNT7B MIRLET7BHG chr22 46053920 + WNT7B chr22 45950146 - Exonic hg38 PRAD TCGA-CH-5751-01A 2 8 5'UTR-CDS Intra-chr q13.31 q13.31 98530 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNAQ-VEPH1 GNAQ chr9 77794463 - VEPH1 chr3 157265662 - Exonic hg38 PRAD TCGA-CH-5751-01A 1 11 Out-of-frame Inter-chr q21.2 Oncogene q25.32 Seq+ 98531 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERCC6L2-ATP8A1 ERCC6L2 chr9 95956013 + ATP8A1 chr4 42524847 - Exonic hg38 PRAD TCGA-CH-5751-01A 2 6 In-Frame Inter-chr q22.32 p13 Seq+ 98532 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNG2-SLC4A4 CCNG2 chr4 77164479 + SLC4A4 chr4 71236576 + Exonic hg38 PRAD TCGA-CH-5751-01A 2 3 CDS-5'UTR Intra-chr q21.1 q13.3 98533 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMTM8-STT3B CMTM8 chr3 32239119 + STT3B chr3 31596798 + Exonic hg38 PRAD TCGA-CH-5751-01A 1 5 In-Frame Intra-chr p22.3 p23 Seq+ 98534 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF7L1-MEX3D TCF7L1 chr19 1615286 - MEX3D chr19 1556924 - Exonic hg38 PRAD TCGA-CH-5751-01A 1000 1000 Out-of-frame Intra-chr p11.2 Oncogene Transcription factor p13.3 98535 ChimerSeq TCGA FAWG TCGA_RNA-Seq NET1-ACSM3 NET1 chr10 5429229 + ACSM3 chr16 20796370 + Exonic hg38 PRAD TCGA-CH-5752-01A 6 30 In-Frame Inter-chr p15.1 p12.3 Seq+ 98536 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMIZ1-DENND2A ZMIZ1 chr10 79216274 + DENND2A chr7 140602542 - Exonic hg38 PRAD TCGA-CH-5752-01A 2 3 CDS-5'UTR Inter-chr q22.3 q34 Seq+ 98537 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC30A6-GNA11 SLC30A6 chr2 32171373 + GNA11 chr19 3110149 + Exonic hg38 PRAD TCGA-CH-5754-01A 15 50 Out-of-frame Inter-chr p22.3 p13.3 Oncogene Seq+ 98538 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNA11-SLC30A6 GNA11 chr19 3094787 + SLC30A6 chr2 32175319 + Exonic hg38 PRAD TCGA-CH-5754-01A 6 46 In-Frame Inter-chr p13.3 Oncogene p22.3 Seq+ 98539 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM268-GADD45GIP1 TMEM268 chr9 114617301 + GADD45GIP1 chr19 12954526 - Exonic hg38 PRAD TCGA-CH-5754-01A 3 5 Out-of-frame Inter-chr q32 p13.13 Tumor suppressor gene 98540 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2C-C7orf77 KMT2C chr7 152195907 - C7orf77 chr7 124787872 - Exonic hg38 PRAD TCGA-CH-5761-01A 12 42 Out-of-frame Intra-chr q36.1 Oncogene Tumor suppressor gene q31.33 98541 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPT-RPL26 MAPT chr17 45962470 + RPL26 chr17 8382315 - Exonic hg38 PRAD TCGA-CH-5761-01A 4 62 3'UTR-5'UTR Intra-chr p13.1 98542 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAN2C1-MESP2 MAN2C1 chr15 75356793 - MESP2 chr15 89777148 + Exonic hg38 PRAD TCGA-CH-5761-01A 8 35 Out-of-frame Intra-chr q24.2 q26.1 Transcription factor Seq+ 98543 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGN2P46-CASC21 HMGN2P46 chr15 45513963 + CASC21 chr8 127392504 + Exonic hg38 PRAD TCGA-CH-5761-01A 4 12 5'UTR-5'UTR Inter-chr q21.1 q24.21 98544 ChimerSeq TCGA FAWG TCGA_RNA-Seq PMEPA1-ETV4 PMEPA1 chr20 57709474 - ETV4 chr17 43536479 - Exonic hg38 PRAD TCGA-CH-5762-01A 108 815 In-Frame Inter-chr q13.31 q21.31 Oncogene Transcription factor Seq+ 98545 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX8-NKILA DHX8 chr17 43536479 + NKILA chr20 57711324 + Exonic hg38 PRAD TCGA-CH-5762-01A 20 80 Out-of-frame Inter-chr q21.31 q13.31 98546 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-MORC3 TMPRSS2 chr21 41498119 - MORC3 chr21 36333646 + Exonic hg38 PRAD TCGA-CH-5762-01A 18 32 In-Frame Intra-chr q22.3 q22.12 Seq+ 98547 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLE3-CT62 TLE3 chr15 70094532 - CT62 chr15 71111426 - Exonic hg38 PRAD TCGA-CH-5762-01A 1 5 Out-of-frame Intra-chr q23 q23 98548 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 41508081 - ETV4 chr17 43545367 - Exonic hg38 PRAD TCGA-CH-5763-01A 35 9 5'UTR-5'UTR Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 98549 ChimerSeq TCGA FAWG TCGA_RNA-Seq TGM4-EEF2 TGM4 chr3 44903987 + EEF2 chr19 3984350 - Exonic hg38 PRAD TCGA-CH-5763-01A 1 26 3'UTR-CDS Inter-chr p13.3 98550 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFF1-PAQR3 AFF1 chr4 87094969 + PAQR3 chr4 78887309 - Exonic hg38 PRAD TCGA-CH-5763-01A 2 10 CDS-3'UTR Intra-chr q21.3 Oncogene q21.21 Seq+ 98551 ChimerSeq TCGA FAWG TCGA_RNA-Seq UTRN-EIF4G3 UTRN chr6 144789279 + EIF4G3 chr1 20813239 - Exonic hg38 PRAD TCGA-CH-5763-01A 2 5 Out-of-frame Inter-chr q24.2 p36.12 Seq+ 98552 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF4G3-SNX9 EIF4G3 chr1 20817392 - SNX9 chr6 157921531 + Exonic hg38 PRAD TCGA-CH-5763-01A 1 2 Out-of-frame Inter-chr p36.12 q25.3 98553 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCD3-DPYD ABCD3 chr1 94491247 + DPYD chr1 97515941 - Exonic hg38 PRAD TCGA-CH-5764-01A 3 19 In-Frame Intra-chr p21.3 p21.3 Oncogene Seq+ 98554 ChimerSeq TCGA FAWG TCGA_RNA-Seq IRF2-ENPP6 IRF2 chr4 184474379 - ENPP6 chr4 184124272 - Exonic hg38 PRAD TCGA-CH-5764-01A 4 12 5'UTR-CDS Intra-chr q35.1 Transcription factor q35.1 Seq+ 98555 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC30A4-PDE2A SLC30A4 chr15 45511138 - PDE2A chr11 72631139 - Exonic hg38 PRAD TCGA-CH-5765-01A 4 10 In-Frame Inter-chr q21.1 q13.4 Seq+ 98556 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRCC1-ZC2HC1A LRRCC1 chr8 85113099 + ZC2HC1A chr8 78715221 + Exonic hg38 PRAD TCGA-CH-5765-01A 3 9 Out-of-frame Intra-chr q21.2 q21.13 Seq+ 98557 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLPP1-CDC20B PLPP1 chr5 55441851 - CDC20B chr5 55146856 - Exonic hg38 PRAD TCGA-CH-5766-01A 349 1831 In-Frame Intra-chr q11.2 q11.2 Seq+ 98558 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMK2G-NDUFA13 CAMK2G chr10 73815003 - NDUFA13 chr19 19526182 + Exonic hg38 PRAD TCGA-CH-5766-01A 4 27 3'UTR-CDS Inter-chr q22.2 p13.11 Seq+ 98559 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTEN-RALGAPA2 PTEN chr10 87894109 + RALGAPA2 chr20 20643549 - Exonic hg38 PRAD TCGA-CH-5766-01A 2 22 3'UTR-CDS Inter-chr q23.31 Oncogene Tumor suppressor gene p11.23 Seq+ 98560 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATAD2B-NENF GATAD2B chr1 153922733 - NENF chr1 212442565 + Exonic hg38 PRAD TCGA-CH-5766-01A 3 13 5'UTR-CDS Intra-chr Transcription factor q32.3 Seq+ 98561 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4K4-TSSK6 MAP4K4 chr2 101698538 + TSSK6 chr19 19512542 - Exonic hg38 PRAD TCGA-CH-5766-01A 1 19 CDS-3'UTR Inter-chr q11.2 p13.11 98562 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPM8-UGT1A6 TRPM8 chr2 233985865 + UGT1A6 chr2 233754690 + Exonic hg38 PRAD TCGA-CH-5766-01A 1 15 Out-of-frame Intra-chr q37.1 q37.1 Seq+ 98563 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNA1C-DDX55 CACNA1C chr12 2601960 + DDX55 chr12 123619964 + Exonic hg38 PRAD TCGA-CH-5766-01A 3 4 3'UTR-CDS Intra-chr p13.33 q24.31 Seq+ 98564 ChimerSeq TCGA FAWG TCGA_RNA-Seq VTI1A-SUGP2 VTI1A chr10 112668998 + SUGP2 chr19 19031082 - Exonic hg38 PRAD TCGA-CH-5766-01A 1 3 Out-of-frame Inter-chr q25.2 p13.11 Seq+ 98565 ChimerSeq TCGA FAWG TCGA_RNA-Seq AZIN1-ZFPM2 AZIN1 chr8 102858013 - ZFPM2 chr8 105444280 + Exonic hg38 PRAD TCGA-CH-5767-01A 12 62 5'UTR-5'UTR Intra-chr q22.3 q22.3 Transcription factor Seq+ 98566 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF841-ZNF615 ZNF841 chr19 52088937 - ZNF615 chr19 52003900 - Exonic hg38 PRAD TCGA-CH-5767-01A 1000 1000 5'UTR-5'UTR Intra-chr q13.41 Transcription factor q13.41 Transcription factor 98567 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEX14-HMOX2 PEX14 chr1 10536297 + HMOX2 chr16 4505484 + Exonic hg38 PRAD TCGA-CH-5768-01A 13 70 CDS-3'UTR Inter-chr p36.22 p13.3 Seq+ 98568 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX8-MYO18A DHX8 chr17 43484185 + MYO18A chr17 29167021 - Exonic hg38 PRAD TCGA-CH-5768-01A 6 18 5'UTR-5'UTR Intra-chr q21.31 q11.2 Oncogene Seq+ 98569 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO6-CADM2 MYO6 chr6 75749423 + CADM2 chr3 85802047 + Exonic hg38 PRAD TCGA-CH-5768-01A 2 4 5'UTR-5'UTR Inter-chr q14.1 p12.1 Tumor suppressor gene 98570 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2AK4-BUB1B EIF2AK4 chr15 40017242 + BUB1B chr15 40212499 + Exonic hg38 PRAD TCGA-CH-5771-01A 24 166 In-Frame Intra-chr q15.1 q15.1 Oncogene Seq+ 98571 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERINC5-TTC39A SERINC5 chr5 80166383 - TTC39A chr1 51321825 - Exonic hg38 PRAD TCGA-CH-5771-01A 13 97 Out-of-frame Inter-chr q14.1 p32.3 Seq+ 98572 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC39A-CDC42 TTC39A chr1 51330437 - CDC42 chr1 22078429 + Exonic hg38 PRAD TCGA-CH-5771-01A 9 4 CDS-5'UTR Intra-chr p32.3 p36.12 Seq+ 98573 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL13-EIF4G3 METTL13 chr1 171784499 + EIF4G3 chr1 20904971 - Exonic hg38 PRAD TCGA-CH-5771-01A 2 23 Out-of-frame Intra-chr q24.3 p36.12 Seq+ 98574 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERINC5-CDYL2 SERINC5 chr5 80255896 - CDYL2 chr16 80685129 - Exonic hg38 PRAD TCGA-CH-5771-01A 4 3 In-Frame Inter-chr q14.1 q23.2 Seq+ 98575 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL9-SERINC5 OSBPL9 chr1 51617221 + SERINC5 chr5 80158962 - Exonic hg38 PRAD TCGA-CH-5771-01A 1 12 Out-of-frame Inter-chr p32.3 q14.1 Seq+ 98576 ChimerSeq TCGA FAWG TCGA_RNA-Seq P4HA1-CTNNA3 P4HA1 chr10 73072029 - CTNNA3 chr10 67539669 - Exonic hg38 PRAD TCGA-CH-5771-01A 2 4 In-Frame Intra-chr q22.1 q21.3 Tumor suppressor gene Seq+ 98577 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPN2-RERE RPN2 chr20 37213865 + RERE chr1 8557523 - Exonic hg38 PRAD TCGA-CH-5771-01A 1 8 In-Frame Inter-chr q11.23 p36.23 98578 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED12-RPL14 MED12 chrX 71141286 + RPL14 chr3 40462069 + Exonic hg38 PRAD TCGA-CH-5772-01A 1000 1000 Out-of-frame Inter-chr q13.1 Oncogene p22.1 98579 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA3D-RBM28 SEMA3D chr7 85153608 - RBM28 chr7 128339791 - Exonic hg38 PRAD TCGA-CH-5788-01A 7 14 5'UTR-CDS Intra-chr q21.11 q32.1 Seq+ 98580 ChimerSeq TCGA FAWG TCGA_RNA-Seq APC-KIAA0825 APC chr5 112792529 + KIAA0825 chr5 94154124 - Exonic hg38 PRAD TCGA-CH-5788-01A 3 5 Out-of-frame Intra-chr q22.2 Oncogene Tumor suppressor gene q15 Seq+ 98581 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPD2-GALNT5 GPD2 chr2 156435804 + GALNT5 chr2 157284282 + Exonic hg38 PRAD TCGA-CH-5788-01A 2 6 5'UTR-CDS Intra-chr q24.1 q24.1 Seq+ 98582 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPBP1L1-ZMPSTE24 GPBP1L1 chr1 45654543 - ZMPSTE24 chr1 40267786 + Exonic hg38 PRAD TCGA-CH-5788-01A 1 5 In-Frame Intra-chr p34.1 Transcription factor p34.2 Seq+ 98583 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM110B-SNTG1 FAM110B chr8 58031703 + SNTG1 chr8 50590879 + Exonic hg38 PRAD TCGA-CH-5788-01A 1 3 5'UTR-5'UTR Intra-chr q12.1 q11.21 98584 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACPP-RDH11 ACPP chr3 132356855 + RDH11 chr14 67690421 - Exonic hg38 PRAD TCGA-CH-5789-01A 1 7 In-Frame Inter-chr q22.1 q24.1 98585 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM170A-USP22 TMEM170A chr16 75451738 - USP22 chr17 21028674 - Exonic hg38 PRAD TCGA-CH-5790-01A 1 3 Out-of-frame Inter-chr q23.1 p11.2 98586 ChimerSeq TCGA FAWG TCGA_RNA-Seq CXADR-APP CXADR chr21 17513172 + APP chr21 26053348 - Exonic hg38 PRAD TCGA-CH-5792-01A 123 653 In-Frame Intra-chr q21.1 q21.3 Seq+ 98587 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMTC3-LIN7A TMTC3 chr12 88148504 + LIN7A chr12 80811683 - Exonic hg38 PRAD TCGA-CH-5792-01A 5 56 In-Frame Intra-chr q21.32 q21.31 Seq+ 98588 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASP8-NRP2 CASP8 chr2 201234112 + NRP2 chr2 205683091 + Exonic hg38 PRAD TCGA-CH-5792-01A 8 15 5'UTR-5'UTR Intra-chr q33.1 Oncogene Tumor suppressor gene q33.3 Seq+ 98589 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1A-PRKCH PPM1A chr14 60249677 + PRKCH chr14 61443111 + Exonic hg38 PRAD TCGA-CH-5792-01A 5 4 5'UTR-CDS Intra-chr q23.1 Tumor suppressor gene q23.1 98590 ChimerSeq TCGA FAWG TCGA_RNA-Seq APOLD1-CREBL2 APOLD1 chr12 12814224 + CREBL2 chr12 12635777 + Exonic hg38 PRAD TCGA-CH-5792-01A 1 14 3'UTR-3'UTR Intra-chr p13.1 p13.1 Transcription factor 98591 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX47-CREBL2 DDX47 chr12 12814224 + CREBL2 chr12 12635777 + Exonic hg38 PRAD TCGA-CH-5792-01A 1 14 CDS-3'UTR Intra-chr p13.1 p13.1 Transcription factor Seq+ 98592 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNC2H1-CARD17 DYNC2H1 chr11 103358359 + CARD17 chr11 105099421 - Exonic hg38 PRAD TCGA-CH-5792-01A 2 1 Out-of-frame Intra-chr q22.3 q22.3 98593 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHB2-BIRC6 PLEKHB2 chr2 131140275 + BIRC6 chr2 32490041 + Exonic hg38 PRAD TCGA-CH-5792-01A 1 3 In-Frame Intra-chr q21.1 p22.3 98594 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM2-FAM49A PUM2 chr2 20294376 - FAM49A chr2 16588129 - Exonic hg38 PRAD TCGA-CH-5794-01A 1 10 CDS-5'UTR Intra-chr p24.1 p24.2 Seq+ 98595 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK3-AGTPBP1 TAOK3 chr12 118372648 - AGTPBP1 chr9 85712566 - Exonic hg38 PRAD TCGA-CH-5794-01A 1 5 5'UTR-5'UTR Inter-chr q24.23 q21.33 Seq+ 98596 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIK3-TMPRSS2 SIK3 chr11 117098143 - TMPRSS2 chr21 41498189 - Exonic hg38 PRAD TCGA-EJ-5495-01A 3 4 Out-of-frame Inter-chr q23.3 q22.3 Seq+ 98597 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLPH3-SLC6A19 GOLPH3 chr5 32173810 - SLC6A19 chr5 1218903 + Exonic hg38 PRAD TCGA-EJ-5496-01A 7 10 In-Frame Intra-chr p13.3 p15.33 Seq+ 98598 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM9SF3-RPP30 TM9SF3 chr10 96586734 - RPP30 chr10 90895880 + Exonic hg38 PRAD TCGA-EJ-5497-01A 12 11 In-Frame Intra-chr q24.1 q23.31 Seq+ 98599 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA4-C10orf25 NCOA4 chr10 46030526 - C10orf25 chr10 45000416 - Exonic hg38 PRAD TCGA-EJ-5497-01A 6 12 5'UTR-CDS Intra-chr q11.22 Oncogene Tumor suppressor gene q11.21 Seq+ 98600 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE4D-FGF14 PDE4D chr5 60487942 - FGF14 chr13 101726810 - Exonic hg38 PRAD TCGA-EJ-5497-01A 5 13 5'UTR-CDS Inter-chr q12.1 q33.1 Seq+ 98601 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAF1-GXYLT2 RAF1 chr3 12663813 - GXYLT2 chr3 72908367 + Exonic hg38 PRAD TCGA-EJ-5497-01A 3 9 5'UTR-5'UTR Intra-chr p25.2 TKL:RAF Oncogene p13 Seq+ 98602 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS1-GET4 INTS1 chr7 1470846 - GET4 chr7 890928 + Exonic hg38 PRAD TCGA-EJ-5497-01A 2 6 In-Frame Intra-chr p22.3 p22.3 Seq+ 98603 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS1-SUN1 INTS1 chr7 1470846 - SUN1 chr7 890928 + Exonic hg38 PRAD TCGA-EJ-5497-01A 2 6 CDS-3'UTR Intra-chr p22.3 p22.3 Seq+ 98604 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPP30-PYHIN1 RPP30 chr10 90903276 + PYHIN1 chr1 158973647 + Exonic hg38 PRAD TCGA-EJ-5497-01A 1 6 3'UTR-CDS Inter-chr q23.31 q23.1 Tumor suppressor gene 98605 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNRNP200-NAALADL2 SNRNP200 chr2 96305393 - NAALADL2 chr3 175447229 + Exonic hg38 PRAD TCGA-EJ-5497-01A 2 1 Out-of-frame Inter-chr q11.2 q26.31 98606 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPATA13-MIPEP SPATA13 chr13 24224582 + MIPEP chr13 23809924 - Exonic hg38 PRAD TCGA-EJ-5497-01A 1 4 In-Frame Intra-chr q12.12 q12.12 98607 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDRG1-DACT3 NDRG1 chr8 133280231 - DACT3 chr19 46653074 - Exonic hg38 PRAD TCGA-EJ-5498-01A 15 186 Out-of-frame Inter-chr q24.22 Tumor suppressor gene q13.32 Seq+ 98608 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASB7-DEXI ASB7 chr15 100612427 + DEXI chr16 10929559 - Exonic hg38 PRAD TCGA-EJ-5498-01A 3 15 CDS-3'UTR Inter-chr q26.3 p13.13 Seq+ 98609 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPARD-WDR27 PPARD chr6 35347150 + WDR27 chr6 169602321 - Exonic hg38 PRAD TCGA-EJ-5498-01A 2 17 Out-of-frame Intra-chr p21.31 Transcription factor q27 Seq+ 98610 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL2-GALNTL6 KLHL2 chr4 165220059 + GALNTL6 chr4 172931161 + Exonic hg38 PRAD TCGA-EJ-5498-01A 1 9 Out-of-frame Intra-chr q32.3 q34.1 Seq+ 98611 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF20-EPB41L1 PHF20 chr20 35801605 + EPB41L1 chr20 36175551 + Exonic hg38 PRAD TCGA-EJ-5499-01A 9 47 Out-of-frame Intra-chr q11.22 Transcription factor q11.23 Seq+ 98612 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARP8-EIF5A2 PARP8 chr5 50668125 + EIF5A2 chr3 170907093 - Exonic hg38 PRAD TCGA-EJ-5501-01A 11 25 Out-of-frame Inter-chr q11.1 q26.2 Seq+ 98613 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARB-FAM19A4 RARB chr3 25501323 + FAM19A4 chr3 68753018 - Exonic hg38 PRAD TCGA-EJ-5501-01A 1 3 Out-of-frame Intra-chr p24.2 Tumor suppressor gene Transcription factor p14.1 Seq+ 98614 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFDN-CCDC162P AFDN chr6 167902386 + CCDC162P chr6 109348427 + Exonic hg38 PRAD TCGA-EJ-5502-01A 12 16 CDS-5'UTR Intra-chr q27 q21 98615 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEAD1-MICAL2 TEAD1 chr11 12675561 + MICAL2 chr11 12208023 + Exonic hg38 PRAD TCGA-EJ-5503-01A 20 74 5'UTR-5'UTR Intra-chr p15.3 Transcription factor p15.3 Seq+ 98616 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSC1-CEL TSC1 chr9 132921363 - CEL chr9 133070461 + Exonic hg38 PRAD TCGA-EJ-5503-01A 5 14 In-Frame Intra-chr q34.13 Oncogene Tumor suppressor gene q34.13 Seq+ 98617 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL2A1-ZNF609 COL2A1 chr12 48004237 - ZNF609 chr15 64622827 + Exonic hg38 PRAD TCGA-EJ-5503-01A 1 5 Out-of-frame Inter-chr q13.11 q22.31 Transcription factor Seq+ 98618 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM39A-EPHA6 TMEM39A chr3 119452447 - EPHA6 chr3 96987330 + Exonic hg38 PRAD TCGA-EJ-5505-01A 10 17 In-Frame Intra-chr q13.33 q11.2 Seq+ 98619 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGA-ZFAND6 MGA chr15 41621298 + ZFAND6 chr15 80120328 + Exonic hg38 PRAD TCGA-EJ-5506-01A 1 3 5'UTR-5'UTR Intra-chr q15.1 Transcription factor q25.1 98620 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANTXR2-CHMP1A ANTXR2 chr4 79977621 - CHMP1A chr16 89647331 - Exonic hg38 PRAD TCGA-EJ-5506-01A 1 2 In-Frame Inter-chr q21.21 q24.3 98621 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP11B-CARS ATP11B chr3 182845522 + CARS chr11 3005433 - Exonic hg38 PRAD TCGA-EJ-5507-01A 66 534 CDS-5'UTR Inter-chr q26.33 Oncogene Seq+ 98622 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1XR1-PIK3CA TBL1XR1 chr3 177197121 - PIK3CA chr3 179198750 + Exonic hg38 PRAD TCGA-EJ-5507-01A 10 17 5'UTR-5'UTR Intra-chr q26.32 q26.32 Oncogene Seq+ 98623 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS15-INTS8 TMPRSS15 chr21 18379283 - INTS8 chr8 94831992 + Exonic hg38 PRAD TCGA-EJ-5507-01A 5 4 Out-of-frame Inter-chr q21.1 q22.1 Seq+ 98624 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSI2-CCDC178 MSI2 chr17 57262192 + CCDC178 chr18 33440081 - Exonic hg38 PRAD TCGA-EJ-5507-01A 2 10 CDS-5'UTR Inter-chr q22 q12.1 Seq+ 98625 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL5-GALNT18 RPL5 chr1 92834913 + GALNT18 chr11 11476452 - Exonic hg38 PRAD TCGA-EJ-5507-01A 1000 1000 Out-of-frame Inter-chr p22.1 Tumor suppressor gene p15.4 98626 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAB2-PCMT1 TAB2 chr6 149318015 + PCMT1 chr6 149789954 + Exonic hg38 PRAD TCGA-EJ-5508-01A 4 5 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 98627 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF43-EFHB ZNF43 chr19 21850938 - EFHB chr3 19920567 - Exonic hg38 PRAD TCGA-EJ-5508-01A 1 6 5'UTR-CDS Inter-chr p12 Transcription factor p24.3 Seq+ 98628 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC9-JPH1 TRAPPC9 chr8 140023937 - JPH1 chr8 74259503 - Exonic hg38 PRAD TCGA-EJ-5509-01A 8 31 In-Frame Intra-chr q24.3 q21.11 Seq+ 98629 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMKK2-KDM2B CAMKK2 chr12 121274056 - KDM2B chr12 121494665 - Exonic hg38 PRAD TCGA-EJ-5509-01A 2 31 In-Frame Intra-chr q24.31 q24.31 Transcription factor Seq+ 98630 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3RF1-TLL1 SH3RF1 chr4 169155480 - TLL1 chr4 166025316 + Exonic hg38 PRAD TCGA-EJ-5509-01A 2 14 Out-of-frame Intra-chr q33 q32.3 Seq+ 98631 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGFG2-GJC3 AGFG2 chr7 100548915 + GJC3 chr7 99923603 - Exonic hg38 PRAD TCGA-EJ-5509-01A 4 3 Out-of-frame Intra-chr q22.1 q22.1 98632 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXP2-CAV2 FOXP2 chr7 114426679 + CAV2 chr7 116427322 + Exonic hg38 PRAD TCGA-EJ-5509-01A 1 12 5'UTR-5'UTR Intra-chr q31.1 Transcription factor q31.2 98633 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHCR24-ZCCHC11 DHCR24 chr1 54875093 - ZCCHC11 chr1 52423913 - Exonic hg38 PRAD TCGA-EJ-5509-01A 2 3 Out-of-frame Intra-chr p32.3 p32.3 98634 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP9-CDK14 AKAP9 chr7 91941147 + CDK14 chr7 90563735 + Exonic hg38 PRAD TCGA-EJ-5509-01A 2 2 CDS-5'UTR Intra-chr q21.2 Oncogene q21.13 Seq+ 98635 ChimerSeq TCGA FAWG TCGA_RNA-Seq LUC7L2-ETV1 LUC7L2 chr7 139360322 + ETV1 chr7 13939246 - Exonic hg38 PRAD TCGA-EJ-5510-01A 24 84 In-Frame Intra-chr q34 p21.2 Oncogene Transcription factor Seq+ 98636 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAM9-RGS20 ADAM9 chr8 38997160 + RGS20 chr8 53879258 + Exonic hg38 PRAD TCGA-EJ-5510-01A 5 28 3'UTR-CDS Intra-chr q11.23 Seq+ 98637 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF7-PTEN ARHGEF7 chr13 111244294 + PTEN chr10 87925513 + Exonic hg38 PRAD TCGA-EJ-5510-01A 1 11 CDS-3'UTR Inter-chr q34 q23.31 Oncogene Tumor suppressor gene Seq+ 98638 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTAF1-PTPRR BTAF1 chr10 91966757 + PTPRR chr12 70701323 - Exonic hg38 PRAD TCGA-EJ-5510-01A 1 9 Out-of-frame Inter-chr q23.32 q15 Seq+ 98639 ChimerSeq TCGA FAWG TCGA_RNA-Seq VWA8-COG5 VWA8 chr13 41949936 - COG5 chr7 107362420 - Exonic hg38 PRAD TCGA-EJ-5510-01A 2 4 CDS-5'UTR Inter-chr q14.11 98640 ChimerSeq TCGA FAWG TCGA_RNA-Seq COG5-CCDC122 COG5 chr7 107412502 - CCDC122 chr13 43874927 - Exonic hg38 PRAD TCGA-EJ-5510-01A 2 3 5'UTR-5'UTR Inter-chr q14.11 Seq+ 98641 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC122-LHFP CCDC122 chr13 43874842 - LHFP chr13 39601390 - Exonic hg38 PRAD TCGA-EJ-5510-01A 1 2 Out-of-frame Intra-chr q14.11 q14.11 Seq+ 98642 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM2D3-PTRF TM2D3 chr15 101650004 - PTRF chr17 42405388 - Exonic hg38 PRAD TCGA-EJ-5511-01A 175 915 Out-of-frame Inter-chr q26.3 Seq+ 98643 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAT3-ETV4 STAT3 chr17 42316789 - ETV4 chr17 43533985 - Exonic hg38 PRAD TCGA-EJ-5511-01A 118 455 In-Frame Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q21.31 Oncogene Transcription factor Seq+ 98644 ChimerSeq TCGA FAWG TCGA_RNA-Seq CFAP97-AADAT CFAP97 chr4 185190143 - AADAT chr4 170087248 - Exonic hg38 PRAD TCGA-EJ-5511-01A 1 20 Out-of-frame Intra-chr q35.1 q33 98645 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSAP-AGK GSAP chr7 77396982 - AGK chr7 141601205 + Exonic hg38 PRAD TCGA-EJ-5511-01A 1 2 3'UTR-3'UTR Intra-chr q11.23 98646 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL32-ATP5G2 RPL32 chr3 12841494 - ATP5G2 chr12 53676398 - Exonic hg38 PRAD TCGA-EJ-5511-01A 1 1 Out-of-frame Inter-chr p25.2 q13.13 98647 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCAM2-CRYL1 NCAM2 chr21 20998618 + CRYL1 chr13 20404741 - Exonic hg38 PRAD TCGA-EJ-5512-01A 6 29 In-Frame Inter-chr q21.1 Tumor suppressor gene q12.11 Seq+ 98648 ChimerSeq TCGA FAWG TCGA_RNA-Seq IKZF2-MICU2 IKZF2 chr2 213049713 - MICU2 chr13 21495318 - Exonic hg38 PRAD TCGA-EJ-5512-01A 4 5 In-Frame Inter-chr q34 Tumor suppressor gene Transcription factor q12.11 Seq+ 98649 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRD-C9orf92 PTPRD chr9 8633317 - C9orf92 chr9 16215899 - Exonic hg38 PRAD TCGA-EJ-5514-01A 12 16 Out-of-frame Intra-chr Oncogene Tumor suppressor gene p22.3 Seq+ 98650 ChimerSeq TCGA FAWG TCGA_RNA-Seq JMJD1C-RPL5 JMJD1C chr10 63380318 - RPL5 chr1 92840551 + Exonic hg38 PRAD TCGA-EJ-5514-01A 3 16 In-Frame Inter-chr q21.3 p22.1 Tumor suppressor gene Seq+ 98651 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM39-WFDC13 RBM39 chr20 35713019 - WFDC13 chr20 45704444 + Exonic hg38 PRAD TCGA-EJ-5514-01A 3 16 In-Frame Intra-chr q11.22 q13.12 Seq+ 98652 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP9A-TRPC4AP ATP9A chr20 51768302 - TRPC4AP chr20 35035308 - Exonic hg38 PRAD TCGA-EJ-5514-01A 2 6 Out-of-frame Intra-chr q13.2 q11.22 Seq+ 98653 ChimerSeq TCGA FAWG TCGA_RNA-Seq HKR1-FECH HKR1 chr19 37347872 + FECH chr18 57551374 - Exonic hg38 PRAD TCGA-EJ-5514-01A 2 6 Out-of-frame Inter-chr q13.12 Transcription factor q21.31 Seq+ 98654 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARMC8-TF ARMC8 chr3 138187599 + TF chr3 133764182 + Exonic hg38 PRAD TCGA-EJ-5514-01A 1 5 In-Frame Intra-chr q22.3 q22.1 Seq+ 98655 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNHG4-KDM3B SNHG4 chr5 139278408 + KDM3B chr5 138391013 + Exonic hg38 PRAD TCGA-EJ-5515-01A 9 43 5'UTR-CDS Intra-chr q31.2 q31.2 Tumor suppressor gene Seq+ 98656 ChimerSeq TCGA FAWG TCGA_RNA-Seq BLVRA-SUGCT BLVRA chr7 43758734 + SUGCT chr7 40860316 + Exonic hg38 PRAD TCGA-EJ-5515-01A 6 2 5'UTR-CDS Intra-chr p13 p14.1 98657 ChimerSeq TCGA FAWG TCGA_RNA-Seq WTAP-SOCS2 WTAP chr6 159739045 + SOCS2 chr12 93572685 + Exonic hg38 PRAD TCGA-EJ-5515-01A 1 8 CDS-5'UTR Inter-chr q25.3 q22 Seq+ 98658 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAFB2-KHSRP SAFB2 chr19 5616132 - KHSRP chr19 6418079 - Exonic hg38 PRAD TCGA-EJ-5515-01A 1 4 In-Frame Intra-chr p13.3 Tumor suppressor gene Transcription factor p13.3 Seq+ 98659 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERLEC1-ACYP2 ERLEC1 chr2 53801842 + ACYP2 chr2 54304688 + Exonic hg38 PRAD TCGA-EJ-5515-01A 1 3 Out-of-frame Intra-chr p16.2 p16.2 Seq+ 98660 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEA1-UBL3 EEA1 chr12 92787867 - UBL3 chr13 29777263 - Exonic hg38 PRAD TCGA-EJ-5516-01A 23 29 In-Frame Inter-chr q22 Transcription factor q12.3 Seq+ 98661 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS27-HIST1H2BN MRPS27 chr5 72314081 - HIST1H2BN chr6 27841564 + Exonic hg38 PRAD TCGA-EJ-5516-01A 7 24 CDS-3'UTR Inter-chr q13.2 p22.1 Seq+ 98662 ChimerSeq TCGA FAWG TCGA_RNA-Seq MFAP1-STRC MFAP1 chr15 43812987 - STRC chr15 43605399 - Exonic hg38 PRAD TCGA-EJ-5516-01A 4 10 In-Frame Intra-chr q15.3 q15.3 Seq+ 98663 ChimerSeq TCGA FAWG TCGA_RNA-Seq ING2-IDH1 ING2 chr4 183505367 + IDH1 chr2 208255589 - Exonic hg38 PRAD TCGA-EJ-5516-01A 3 10 CDS-5'UTR Inter-chr q35.1 Tumor suppressor gene q34 Oncogene Tumor suppressor gene Seq+ 98664 ChimerSeq TCGA FAWG TCGA_RNA-Seq HGD-CACNA1D HGD chr3 120670427 - CACNA1D chr3 53743011 + Exonic hg38 PRAD TCGA-EJ-5516-01A 1 11 In-Frame Intra-chr q13.33 p21.1 Seq+ 98665 ChimerSeq TCGA FAWG TCGA_RNA-Seq UTRN-SLC22A23 UTRN chr6 144577288 + SLC22A23 chr6 3324002 - Exonic hg38 PRAD TCGA-EJ-5516-01A 2 7 Out-of-frame Intra-chr q24.2 p25.2 Seq+ 98666 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPATCH8-MEOX1 GPATCH8 chr17 44503326 - MEOX1 chr17 43661393 - Exonic hg38 PRAD TCGA-EJ-5516-01A 1 10 5'UTR-5'UTR Intra-chr q21.31 q21.31 Transcription factor 98667 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPB1-TLDC2 COPB1 chr11 14481050 - TLDC2 chr20 36876121 + Exonic hg38 PRAD TCGA-EJ-5516-01A 1000 1000 CDS-5'UTR Inter-chr p15.2 q11.23 Seq+ 98668 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPUL1-SLC8A2 HNRNPUL1 chr19 41281275 + SLC8A2 chr19 47457594 - Exonic hg38 PRAD TCGA-EJ-5518-01A 49 111 In-Frame Intra-chr q13.2 q13.32 Seq+ 98669 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOR1AIP2-IFI16 TOR1AIP2 chr1 179877239 - IFI16 chr1 159049432 + Exonic hg38 PRAD TCGA-EJ-5518-01A 28 150 5'UTR-CDS Intra-chr q25.2 q23.1 Tumor suppressor gene Seq+ 98670 ChimerSeq TCGA FAWG TCGA_RNA-Seq USF1-UCK2 USF1 chr1 161045858 - UCK2 chr1 165896190 + Exonic hg38 PRAD TCGA-EJ-5518-01A 26 131 5'UTR-CDS Intra-chr q23.3 Transcription factor q24.1 Seq+ 98671 ChimerSeq TCGA FAWG TCGA_RNA-Seq STX6-PRRC2C STX6 chr1 181002606 - PRRC2C chr1 171591587 + Exonic hg38 PRAD TCGA-EJ-5518-01A 10 69 In-Frame Intra-chr q25.3 q24.3 Seq+ 98672 ChimerSeq TCGA FAWG TCGA_RNA-Seq EDEM3-HHAT EDEM3 chr1 184708153 - HHAT chr1 210674288 + Exonic hg38 PRAD TCGA-EJ-5518-01A 14 50 3'UTR-3'UTR Intra-chr q25.3 Seq+ 98673 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASAL2-RABGAP1L RASAL2 chr1 178390206 + RABGAP1L chr1 174231145 + Exonic hg38 PRAD TCGA-EJ-5518-01A 10 57 Out-of-frame Intra-chr q25.2 Tumor suppressor gene q25.1 Seq+ 98674 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUCO-RASAL2 SUCO chr1 172551626 + RASAL2 chr1 178390100 + Exonic hg38 PRAD TCGA-EJ-5518-01A 10 50 Out-of-frame Intra-chr q24.3 q25.2 Tumor suppressor gene Seq+ 98675 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR89B-FCGR2C GPR89B chr1 147928578 + FCGR2C chr1 161581371 + Exonic hg38 PRAD TCGA-EJ-5518-01A 3 59 5'UTR-5'UTR Intra-chr q21.2 q23.3 Seq+ 98676 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1orf132-SMYD3 C1orf132 chr1 207815929 - SMYD3 chr1 245764149 - Exonic hg38 PRAD TCGA-EJ-5518-01A 7 30 Out-of-frame Intra-chr q32.2 q44 Transcription factor Seq+ 98677 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHRM3-SYT14 CHRM3 chr1 239632286 + SYT14 chr1 210094322 + Exonic hg38 PRAD TCGA-EJ-5518-01A 3 45 5'UTR-5'UTR Intra-chr q43 q32.2 Seq+ 98678 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMYD3-COPA SMYD3 chr1 245764041 - COPA chr1 160335322 - Exonic hg38 PRAD TCGA-EJ-5518-01A 2 28 In-Frame Intra-chr q44 Transcription factor q23.2 Seq+ 98679 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP350-GPR161 CEP350 chr1 179955142 + GPR161 chr1 168104894 - Exonic hg38 PRAD TCGA-EJ-5518-01A 2 17 5'UTR-5'UTR Intra-chr q25.2 q24.2 Seq+ 98680 ChimerSeq TCGA FAWG TCGA_RNA-Seq POU2F1-RPRD2 POU2F1 chr1 167220958 + RPRD2 chr1 150440923 + Exonic hg38 PRAD TCGA-EJ-5518-01A 2 17 Out-of-frame Intra-chr q24.2 Transcription factor q21.2 Seq+ 98681 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R5A-CHRM3 PPP2R5A chr1 212286291 + CHRM3 chr1 239492709 + Exonic hg38 PRAD TCGA-EJ-5518-01A 1 21 CDS-5'UTR Intra-chr q32.3 q43 Seq+ 98682 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIP5K1A-ITLN1 PIP5K1A chr1 151232365 + ITLN1 chr1 160884883 - Exonic hg38 PRAD TCGA-EJ-5518-01A 1 19 CDS-5'UTR Intra-chr q21.3 q23.3 Seq+ 98683 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH1L-NSL1 ASH1L chr1 155521100 - NSL1 chr1 212787637 - Exonic hg38 PRAD TCGA-EJ-5518-01A 2 14 In-Frame Intra-chr q22 Transcription factor q32.3 Seq+ 98684 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC73-KIFAP3 CDC73 chr1 193212477 + KIFAP3 chr1 170039288 - Exonic hg38 PRAD TCGA-EJ-5518-01A 1 5 Out-of-frame Intra-chr q31.2 Oncogene Tumor suppressor gene q24.2 98685 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEF2D-ADAMTS4 MEF2D chr1 156500486 - ADAMTS4 chr1 161196880 - Exonic hg38 PRAD TCGA-EJ-5518-01A 1 4 5'UTR-CDS Intra-chr q22 Transcription factor q23.3 98686 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUFT1-ZBTB18 TUFT1 chr1 151540426 + ZBTB18 chr1 244053788 + Exonic hg38 PRAD TCGA-EJ-5518-01A 1000 1000 Out-of-frame Intra-chr q21.3 q44 Tumor suppressor gene Transcription factor 98687 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKIV2L2-SCCPDH SKIV2L2 chr5 55416132 + SCCPDH chr1 246726892 + Exonic hg38 PRAD TCGA-EJ-5519-01A 24 167 Out-of-frame Inter-chr q11.2 q44 Seq+ 98688 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1orf132-CHRM3 C1orf132 chr1 207867926 - CHRM3 chr1 239907433 + Exonic hg38 PRAD TCGA-EJ-5519-01A 4 55 Out-of-frame Intra-chr q32.2 q43 Seq+ 98689 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK14-DLD CDK14 chr7 90604249 + DLD chr7 107901738 + Exonic hg38 PRAD TCGA-EJ-5519-01A 5 31 Out-of-frame Intra-chr q21.13 q31.1 Seq+ 98690 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP29-DNAJC6 ARHGAP29 chr1 94231407 - DNAJC6 chr1 65364635 + Exonic hg38 PRAD TCGA-EJ-5519-01A 3 34 In-Frame Intra-chr p22.1 Tumor suppressor gene p31.3 Seq+ 98691 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNPO1-ENC1 TNPO1 chr5 72872720 + ENC1 chr5 74637618 - Exonic hg38 PRAD TCGA-EJ-5519-01A 3 19 CDS-5'UTR Intra-chr q13.2 q13.3 Seq+ 98692 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCYL3-PDZRN4 SCYL3 chr1 169862613 - PDZRN4 chr12 41506456 + Exonic hg38 PRAD TCGA-EJ-5519-01A 1 18 In-Frame Inter-chr q24.2 Other:SCY1 q12 Seq+ 98693 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFXL1-ERAP2 NFXL1 chr4 47875127 - ERAP2 chr5 96879564 + Exonic hg38 PRAD TCGA-EJ-5519-01A 2 6 CDS-5'UTR Inter-chr p12 Transcription factor q15 98694 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPS1-NCBP2L PRPS1 chrX 107647765 + NCBP2L chrX 107794149 + Exonic hg38 PRAD TCGA-EJ-5519-01A 1000 1000 CDS-5'UTR Intra-chr q22.3 q22.3 98695 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSR-RBPMS GSR chr8 30727530 - RBPMS chr8 30558887 + Exonic hg38 PRAD TCGA-EJ-5521-01A 63 143 In-Frame Intra-chr p12 p12 Seq+ 98696 ChimerSeq TCGA FAWG TCGA_RNA-Seq PICALM-GLYATL1P2 PICALM chr11 86068651 - GLYATL1P2 chr11 58884906 + Exonic hg38 PRAD TCGA-EJ-5521-01A 2 39 Out-of-frame Intra-chr q14.2 q12.1 Seq+ 98697 ChimerSeq TCGA FAWG TCGA_RNA-Seq UGGT2-ANKRD16 UGGT2 chr13 96053155 - ANKRD16 chr10 5862691 - Exonic hg38 PRAD TCGA-EJ-5521-01A 1 18 CDS-3'UTR Inter-chr q32.1 p15.1 Seq+ 98698 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTEN-CTNNA3 PTEN chr10 87931089 + CTNNA3 chr10 67279078 - Exonic hg38 PRAD TCGA-EJ-5521-01A 3 7 3'UTR-CDS Intra-chr q23.31 Oncogene Tumor suppressor gene q21.3 Tumor suppressor gene Seq+ 98699 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPAT4-ADAM9 GPAT4 chr8 41599304 + ADAM9 chr8 39041946 + Exonic hg38 PRAD TCGA-EJ-5522-01A 25 43 CDS-3'UTR Intra-chr p11.21 98700 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBGCP2-UBE4A TUBGCP2 chr10 133302792 - UBE4A chr11 118390657 + Exonic hg38 PRAD TCGA-EJ-5522-01A 3 6 Out-of-frame Inter-chr q26.3 q23.3 Seq+ 98701 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLYCD-MGRN1 MLYCD chr16 83912367 + MGRN1 chr16 4668265 + Exonic hg38 PRAD TCGA-EJ-5524-01A 4 44 In-Frame Intra-chr q23.3 p13.3 Seq+ 98702 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMMECR1L-TNFRSF10C AMMECR1L chr2 127884203 - TNFRSF10C chr8 23111720 + Exonic hg38 PRAD TCGA-EJ-5524-01A 3 26 5'UTR-CDS Inter-chr q14.3 p21.3 Seq+ 98703 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD17-SEC24A RAD17 chr5 69374711 + SEC24A chr5 134715024 + Exonic hg38 PRAD TCGA-EJ-5524-01A 6 14 3'UTR-CDS Intra-chr q31.1 Seq+ 98704 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1H-FAM234B PPM1H chr12 62737502 - FAM234B chr12 13061575 + Exonic hg38 PRAD TCGA-EJ-5524-01A 5 11 Out-of-frame Intra-chr q14.2 p13.1 98705 ChimerSeq TCGA FAWG TCGA_RNA-Seq LCOR-CC2D2B LCOR chr10 96833479 + CC2D2B chr10 95922016 + Exonic hg38 PRAD TCGA-EJ-5524-01A 4 13 5'UTR-CDS Intra-chr q24.1 Transcription factor q24.1 98706 ChimerSeq TCGA FAWG TCGA_RNA-Seq OR51E2-RRM1 OR51E2 chr11 4697653 - RRM1 chr11 4101993 + Exonic hg38 PRAD TCGA-EJ-5524-01A 4 9 5'UTR-5'UTR Intra-chr p15.4 p15.4 Oncogene Seq+ 98707 ChimerSeq TCGA FAWG TCGA_RNA-Seq CORO7-CLEC16A CORO7 chr16 4412356 - CLEC16A chr16 11020193 + Exonic hg38 PRAD TCGA-EJ-5524-01A 2 13 5'UTR-CDS Intra-chr p13.3 p13.13 Seq+ 98708 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53-KIAA0753 TP53 chr17 7687377 - KIAA0753 chr17 6595053 - Exonic hg38 PRAD TCGA-EJ-5525-01A 13 55 5'UTR-CDS Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.1 Seq+ 98709 ChimerSeq TCGA FAWG TCGA_RNA-Seq WLS-TBX3 WLS chr1 68137780 - TBX3 chr12 114672302 - Exonic hg38 PRAD TCGA-EJ-5525-01A 7 13 Out-of-frame Inter-chr p31.3 q24.21 Transcription factor Seq+ 98710 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK2-PIGX PAK2 chr3 196740157 + PIGX chr3 196716858 + Exonic hg38 PRAD TCGA-EJ-5525-01A 8 5 5'UTR-CDS Intra-chr q29 STE:STE20 q29 Seq+ 98711 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOPEY2-ELF2 DOPEY2 chr21 36200501 + ELF2 chr4 139062057 - Exonic hg38 PRAD TCGA-EJ-5525-01A 3 16 Out-of-frame Inter-chr q22.12 q31.1 Transcription factor Seq+ 98712 ChimerSeq TCGA FAWG TCGA_RNA-Seq MESDC2-TMPRSS2 MESDC2 chr15 80978766 - TMPRSS2 chr21 41470743 - Exonic hg38 PRAD TCGA-EJ-5525-01A 3 7 Out-of-frame Inter-chr q25.1 q22.3 Seq+ 98713 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCB8-IQCA1L ABCB8 chr7 151028610 + IQCA1L chr7 151192829 - Exonic hg38 PRAD TCGA-EJ-5525-01A 1 14 In-Frame Intra-chr q36.1 q36.1 98714 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLN6-ALDH1A2 CLN6 chr15 68218536 - ALDH1A2 chr15 58166796 - Exonic hg38 PRAD TCGA-EJ-5525-01A 2 4 CDS-5'UTR Intra-chr q23 q21.3 Tumor suppressor gene Seq+ 98715 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD4A-MCM10 FRMD4A chr10 13858847 - MCM10 chr10 13172376 + Exonic hg38 PRAD TCGA-EJ-5525-01A 2 2 Out-of-frame Intra-chr p13 p13 98716 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM110B-DIABLO FAM110B chr8 57994806 + DIABLO chr12 122218397 - Exonic hg38 PRAD TCGA-EJ-5526-01A 10 77 5'UTR-5'UTR Inter-chr q12.1 q24.31 Tumor suppressor gene Seq+ 98717 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-DIAPH1 TMPRSS2 chr21 41470648 - DIAPH1 chr5 141534433 - Exonic hg38 PRAD TCGA-EJ-5526-01A 4 7 In-Frame Inter-chr q22.3 q31.3 Seq+ 98718 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGF13-CSE1L FGF13 chrX 139204059 - CSE1L chr20 49067190 + Exonic hg38 PRAD TCGA-EJ-5526-01A 1 2 Out-of-frame Inter-chr q27.1 q13.13 98719 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFS3-ERO1B NDUFS3 chr11 47582468 + ERO1B chr1 236218576 - Exonic hg38 PRAD TCGA-EJ-5527-01A 16 34 3'UTR-CDS Inter-chr p11.2 q42.3 98720 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBPJ-C16orf46 RBPJ chr4 26415640 + C16orf46 chr16 81054094 - Exonic hg38 PRAD TCGA-EJ-5527-01A 3 14 In-Frame Inter-chr p15.2 Transcription factor q23.2 Seq+ 98721 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM1-SDCCAG8 PUM1 chr1 31028796 - SDCCAG8 chr1 243330540 + Exonic hg38 PRAD TCGA-EJ-5527-01A 2 17 CDS-3'UTR Intra-chr p35.2 Seq+ 98722 ChimerSeq TCGA FAWG TCGA_RNA-Seq C16orf46-RBPJ C16orf46 chr16 81061206 - RBPJ chr4 26420551 + Exonic hg38 PRAD TCGA-EJ-5527-01A 1 8 In-Frame Inter-chr q23.2 p15.2 Transcription factor 98723 ChimerSeq TCGA FAWG TCGA_RNA-Seq EZR-ZNF596 EZR chr6 158818082 - ZNF596 chr8 240824 + Exonic hg38 PRAD TCGA-EJ-5527-01A 1 7 CDS-5'UTR Inter-chr q25.3 p23.3 Transcription factor 98724 ChimerSeq TCGA FAWG TCGA_RNA-Seq CENPN-C16orf62 CENPN chr16 81020276 + C16orf62 chr16 19633092 + Exonic hg38 PRAD TCGA-EJ-5530-01A 6 55 Out-of-frame Intra-chr q23.2 p12.3 Seq+ 98725 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAA60-IST1 NAA60 chr16 3447620 + IST1 chr16 71915626 + Exonic hg38 PRAD TCGA-EJ-5530-01A 3 29 5'UTR-5'UTR Intra-chr p13.3 q22.2 Seq+ 98726 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAE1-BAX SAE1 chr19 47143605 + BAX chr19 48960810 + Exonic hg38 PRAD TCGA-EJ-5532-01A 35 130 In-Frame Intra-chr q13.32 q13.33 Tumor suppressor gene Seq+ 98727 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAX-WRAP53 BAX chr19 48956333 + WRAP53 chr17 7686634 + Exonic hg38 PRAD TCGA-EJ-5532-01A 12 95 5'UTR-5'UTR Inter-chr q13.33 Tumor suppressor gene p13.1 Seq+ 98728 ChimerSeq TCGA FAWG TCGA_RNA-Seq FKBP5-VPS54 FKBP5 chr6 35575749 - VPS54 chr2 63897590 - Exonic hg38 PRAD TCGA-EJ-5532-01A 10 50 3'UTR-CDS Inter-chr p21.31 p14 Seq+ 98729 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL30-CCDC57 MRPL30 chr2 99181249 + CCDC57 chr17 82157948 - Exonic hg38 PRAD TCGA-EJ-5532-01A 12 12 5'UTR-CDS Inter-chr q11.2 q25.3 Seq+ 98730 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC186-DCLRE1A CCDC186 chr10 114174015 - DCLRE1A chr10 113853847 - Exonic hg38 PRAD TCGA-EJ-5542-01A 4 9 5'UTR-5'UTR Intra-chr q25.3 q25.3 Tumor suppressor gene 98731 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARRDC3-SGCD ARRDC3 chr5 91376621 - SGCD chr5 156344489 + Exonic hg38 PRAD TCGA-EJ-5542-01A 1 3 In-Frame Intra-chr q14.3 q33.2 Seq+ 98732 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMTM4-PLA2G15 CMTM4 chr16 66622062 - PLA2G15 chr16 68259146 + Exonic hg38 PRAD TCGA-EJ-5542-01A 1 2 In-Frame Intra-chr q22.1 q22.1 98733 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT7-SPCS3 GALNT7 chr4 173248440 + SPCS3 chr4 176322170 + Exonic hg38 PRAD TCGA-EJ-7123-01A 1 39 In-Frame Intra-chr q34.1 q34.2 Seq+ 98734 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPON2-EEF2 SPON2 chr4 1207880 - EEF2 chr19 3984350 - Exonic hg38 PRAD TCGA-EJ-7125-01A 1 10 5'UTR-CDS Inter-chr p16.3 p13.3 98735 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS15-DLGAP5 RPS15 chr19 1438892 + DLGAP5 chr14 55150848 - Exonic hg38 PRAD TCGA-EJ-7125-01A 1 3 Out-of-frame Inter-chr p13.3 q22.3 98736 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANTXR2-CHMP1A ANTXR2 chr4 79977621 - CHMP1A chr16 89647331 - Exonic hg38 PRAD TCGA-EJ-7125-01A 1 1 In-Frame Inter-chr q21.21 q24.3 98737 ChimerSeq TCGA FAWG TCGA_RNA-Seq MINDY4-SUGCT MINDY4 chr7 30771556 + SUGCT chr7 40684056 + Exonic hg38 PRAD TCGA-EJ-7218-01B 1 7 In-Frame Intra-chr p14.3 p14.1 98738 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO31-USP10 FBXO31 chr16 87383405 - USP10 chr16 84764086 + Exonic hg38 PRAD TCGA-EJ-7218-01B 1 1 In-Frame Intra-chr q24.2 Tumor suppressor gene q24.1 98739 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC30A6-ACTR2 SLC30A6 chr2 32174147 + ACTR2 chr2 65265043 + Exonic hg38 PRAD TCGA-EJ-7312-01B 3 10 Out-of-frame Intra-chr p22.3 p14 TKL:STKR Seq+ 98740 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDRG1-ERG NDRG1 chr8 133280235 - ERG chr21 38445624 - Exonic hg38 PRAD TCGA-EJ-7314-01A 47 229 Out-of-frame Inter-chr q24.22 Tumor suppressor gene q22.2 Oncogene Transcription factor KB Pub Seq+ 98741 ChimerSeq TCGA FAWG TCGA_RNA-Seq IDE-CAMK1D IDE chr10 92483255 - CAMK1D chr10 12760948 + Exonic hg38 PRAD TCGA-EJ-7314-01A 3 15 In-Frame Intra-chr q23.33 p13 Seq+ 98742 ChimerSeq TCGA FAWG TCGA_RNA-Seq OXR1-1562D12.1 OXR1 chr8 106658185 + 1562D12.1 chr8 101461617 - Exonic hg38 PRAD TCGA-EJ-7314-01A 2 12 Out-of-frame Intra-chr q23.1 98743 ChimerSeq TCGA FAWG TCGA_RNA-Seq YBX3-MRPL42 YBX3 chr12 10722850 - MRPL42 chr12 93501176 + Exonic hg38 PRAD TCGA-EJ-7315-01A 9 92 Out-of-frame Intra-chr p13.2 Transcription factor q22 Seq+ 98744 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICAL3-ATAD1 MICAL3 chr22 18001393 - ATAD1 chr10 87814612 - Exonic hg38 PRAD TCGA-EJ-7315-01A 3 22 5'UTR-5'UTR Inter-chr q11.21 Seq+ 98745 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIP12-PID1 TRIP12 chr2 229777315 - PID1 chr2 228850648 - Exonic hg38 PRAD TCGA-EJ-7315-01A 1000 1000 CDS-3'UTR Intra-chr q36.3 q36.3 Seq+ 98746 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2orf76-MARCO C2orf76 chr2 119339827 - MARCO chr2 118982156 + Exonic hg38 PRAD TCGA-EJ-7317-01A 2 3 In-Frame Intra-chr q14.2 q14.2 98747 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC9A3R1-FBXO18 SLC9A3R1 chr17 74749287 + FBXO18 chr10 5936456 + Exonic hg38 PRAD TCGA-EJ-7318-01B 8 31 Out-of-frame Inter-chr q25.1 Tumor suppressor gene p15.1 Seq+ 98748 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM104-LIN52 TMEM104 chr17 74777375 + LIN52 chr14 74091232 + Exonic hg38 PRAD TCGA-EJ-7318-01B 8 26 Out-of-frame Inter-chr q25.1 q24.3 Seq+ 98749 ChimerSeq TCGA FAWG TCGA_RNA-Seq VIPAS39-BBOF1 VIPAS39 chr14 77433842 - BBOF1 chr14 74078196 + Exonic hg38 PRAD TCGA-EJ-7318-01B 3 12 CDS-3'UTR Intra-chr q24.3 q24.3 98750 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEFF2-CHMP1A TMEFF2 chr2 192179668 - CHMP1A chr16 89647331 - Exonic hg38 PRAD TCGA-EJ-7318-01B 1 1 In-Frame Inter-chr q32.3 Tumor suppressor gene q24.3 98751 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R21-DNAH6 PPP1R21 chr2 48465642 + DNAH6 chr2 84819305 + Exonic hg38 PRAD TCGA-EJ-7321-01A 10 55 CDS-3'UTR Intra-chr p16.3 p11.2 Seq+ 98752 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHCR24-FKBP5 DHCR24 chr1 54875093 - FKBP5 chr6 35587117 - Exonic hg38 PRAD TCGA-EJ-7321-01A 5 16 In-Frame Inter-chr p32.3 p21.31 98753 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPUL1-ATG10 HNRNPUL1 chr19 41294686 + ATG10 chr5 82252562 + Exonic hg38 PRAD TCGA-EJ-7321-01A 3 13 In-Frame Inter-chr q13.2 q14.1 Seq+ 98754 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRG-CADPS PTPRG chr3 61562372 + CADPS chr3 62592748 - Exonic hg38 PRAD TCGA-EJ-7321-01A 3 3 Out-of-frame Intra-chr p14.2 p14.2 98755 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD11-PSMB1 ANKRD11 chr16 89490245 - PSMB1 chr6 170549113 - Exonic hg38 PRAD TCGA-EJ-7321-01A 2 3 5'UTR-CDS Inter-chr q24.3 98756 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGB1-WDFY4 ITGB1 chr10 32958145 - WDFY4 chr10 48897454 + Exonic hg38 PRAD TCGA-EJ-7321-01A 2 2 5'UTR-CDS Intra-chr p11.22 Tumor suppressor gene q11.23 98757 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1orf174-SNAP47 C1orf174 chr1 3900172 - SNAP47 chr1 227758995 + Exonic hg38 PRAD TCGA-EJ-7321-01A 1 3 Out-of-frame Intra-chr p36.32 q42.13 Seq+ 98758 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBOAT2-ADI1 MBOAT2 chr2 9003540 - ADI1 chr2 3500993 - Exonic hg38 PRAD TCGA-EJ-7325-01B 23 74 5'UTR-5'UTR Intra-chr p25.1 Seq+ 98759 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC7-SCGB2A2 DNAJC7 chr17 41990264 - SCGB2A2 chr11 62272957 + Exonic hg38 PRAD TCGA-EJ-7325-01B 1 5 Out-of-frame Inter-chr q21.2 q12.3 Seq+ 98760 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPBP1-MTRR GPBP1 chr5 57231321 + MTRR chr5 7889095 + Exonic hg38 PRAD TCGA-EJ-7327-01A 12 73 In-Frame Intra-chr q11.2 Transcription factor p15.31 Oncogene Seq+ 98761 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERG-SKOR2 ERG chr21 38575662 - SKOR2 chr18 47249230 - Exonic hg38 PRAD TCGA-EJ-7327-01A 1 6 5'UTR-5'UTR Inter-chr q22.2 Oncogene Transcription factor q21.1 Transcription factor 98762 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDK3-CADPS PDK3 chrX 24498900 + CADPS chr3 62662394 - Exonic hg38 PRAD TCGA-EJ-7327-01A 1 4 Out-of-frame Inter-chr p22.11 p14.2 Seq+ 98763 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNPDA1-RNGTT GNPDA1 chr5 142004932 - RNGTT chr6 88906440 - Exonic hg38 PRAD TCGA-EJ-7327-01A 1 3 Out-of-frame Inter-chr q31.3 q15 Seq+ 98764 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R2A-MTUS1 PPP2R2A chr8 26293740 + MTUS1 chr8 17647079 - Exonic hg38 PRAD TCGA-EJ-7328-01A 14 62 Out-of-frame Intra-chr p21.2 p22 Tumor suppressor gene Seq+ 98765 ChimerSeq TCGA FAWG TCGA_RNA-Seq CGRRF1-WDHD1 CGRRF1 chr14 54510063 + WDHD1 chr14 54984860 - Exonic hg38 PRAD TCGA-EJ-7328-01A 1 21 Out-of-frame Intra-chr q22.2 q22.3 Seq+ 98766 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDH1A3-USP25 ALDH1A3 chr15 100915274 + USP25 chr21 15833348 + Exonic hg38 PRAD TCGA-EJ-7328-01A 1000 1000 3'UTR-CDS Inter-chr q26.3 q21.1 Seq+ 98767 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL11A1-DPH5 COL11A1 chr1 102886910 - DPH5 chr1 101026061 - Exonic hg38 PRAD TCGA-EJ-7330-01A 4 20 Out-of-frame Intra-chr p21.1 p21.2 Seq+ 98768 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP8B4-OCA2 ATP8B4 chr15 49876278 - OCA2 chr15 28081895 - Exonic hg38 PRAD TCGA-EJ-7330-01A 4 9 CDS-5'UTR Intra-chr q21.2 q13.1 Seq+ 98769 ChimerSeq TCGA FAWG TCGA_RNA-Seq CADPS2-DNAH11 CADPS2 chr7 122393441 - DNAH11 chr7 21615114 + Exonic hg38 PRAD TCGA-EJ-7330-01A 3 4 Out-of-frame Intra-chr q31.32 p15.3 Seq+ 98770 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2D3-CA10 UBE2D3 chr4 102826485 - CA10 chr17 51649254 - Exonic hg38 PRAD TCGA-EJ-7781-01A 30 349 In-Frame Inter-chr q24 q22 Seq+ 98771 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNG4-SH3D19 GNG4 chr1 235649662 - SH3D19 chr4 151165696 - Exonic hg38 PRAD TCGA-EJ-7781-01A 9 13 5'UTR-CDS Inter-chr q31.3 Seq+ 98772 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHRS4-MANBA DHRS4 chr14 23953916 + MANBA chr4 102726683 - Exonic hg38 PRAD TCGA-EJ-7781-01A 1 8 3'UTR-CDS Inter-chr q11.2 q24 Seq+ 98773 ChimerSeq TCGA FAWG TCGA_RNA-Seq LYPD6B-LRBA LYPD6B chr2 149119163 + LRBA chr4 150798142 - Exonic hg38 PRAD TCGA-EJ-7782-01A 7 26 5'UTR-CDS Inter-chr q23.2 q31.3 Seq+ 98774 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL1RAPL2-STK39 IL1RAPL2 chrX 105234004 + STK39 chr2 167964726 - Exonic hg38 PRAD TCGA-EJ-7782-01A 5 15 Out-of-frame Inter-chr q22.3 q24.3 Seq+ 98775 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXNDC5-RREB1 TXNDC5 chr6 7895106 - RREB1 chr6 7176655 + Exonic hg38 PRAD TCGA-EJ-7782-01A 3 20 CDS-5'UTR Intra-chr p24.3 p24.3 Transcription factor Seq+ 98776 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKHD1-CAGE1 PKHD1 chr6 52010309 - CAGE1 chr6 7334090 - Exonic hg38 PRAD TCGA-EJ-7782-01A 4 5 Out-of-frame Intra-chr p12.2 Oncogene p24.3 Seq+ 98777 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKHD1-SSR1 PKHD1 chr6 52010309 - SSR1 chr6 7334090 - Exonic hg38 PRAD TCGA-EJ-7782-01A 4 3 CDS-5'UTR Intra-chr p12.2 Oncogene p24.3 98778 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL23-PTCHD3P2 KLHL23 chr2 169697531 + PTCHD3P2 chr2 169767302 - Exonic hg38 PRAD TCGA-EJ-7782-01A 1 8 Out-of-frame Intra-chr q31.1 q31.1 98779 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCAR2-CERNA1 CCAR2 chr8 22606176 + CERNA1 chr15 52204889 + Exonic hg38 PRAD TCGA-EJ-7783-01A 5 21 5'UTR-5'UTR Inter-chr p21.3 Tumor suppressor gene q21.2 98780 ChimerSeq TCGA FAWG TCGA_RNA-Seq LEO1-FBN1 LEO1 chr15 51971688 - FBN1 chr15 48537808 - Exonic hg38 PRAD TCGA-EJ-7783-01A 5 14 In-Frame Intra-chr q21.2 q21.1 Seq+ 98781 ChimerSeq TCGA FAWG TCGA_RNA-Seq IREB2-LEO1 IREB2 chr15 78488771 + LEO1 chr15 51966504 - Exonic hg38 PRAD TCGA-EJ-7783-01A 4 6 Out-of-frame Intra-chr q25.1 q21.2 Seq+ 98782 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSK3B-ARNT GSK3B chr3 119863419 - ARNT chr1 150818030 - Exonic hg38 PRAD TCGA-EJ-7783-01A 1 5 Out-of-frame Inter-chr q13.33 CMGC:GSK Tumor suppressor gene q21.3 Oncogene Transcription factor 98783 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ATF7IP TMPRSS2 chr21 41498119 - ATF7IP chr12 14460495 + Exonic hg38 PRAD TCGA-EJ-7784-01A 197 894 Out-of-frame Inter-chr q22.3 p13.1 Seq+ 98784 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF7IP-TMPRSS2 ATF7IP chr12 14457295 + TMPRSS2 chr21 41489593 - Exonic hg38 PRAD TCGA-EJ-7784-01A 35 127 In-Frame Inter-chr p13.1 q22.3 Seq+ 98785 ChimerSeq TCGA FAWG TCGA_RNA-Seq RLF-GPATCH8 RLF chr1 40161636 + GPATCH8 chr17 44474903 - Exonic hg38 PRAD TCGA-EJ-7784-01A 7 25 In-Frame Inter-chr p34.2 Transcription factor q21.31 Seq+ 98786 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDE2-SLC22A15 SDE2 chr1 225995266 - SLC22A15 chr1 116019582 + Exonic hg38 PRAD TCGA-EJ-7784-01A 3 9 Out-of-frame Intra-chr q42.12 p13.1 98787 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC14A-PGM1 CDC14A chr1 100455492 + PGM1 chr1 63648517 + Exonic hg38 PRAD TCGA-EJ-7784-01A 1 6 In-Frame Intra-chr p21.2 p31.3 98788 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPATCH8-ZMYM4 GPATCH8 chr17 44503326 - ZMYM4 chr1 35295927 + Exonic hg38 PRAD TCGA-EJ-7784-01A 1 4 5'UTR-5'UTR Inter-chr q21.31 p34.3 Seq+ 98789 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPRE1-USP28 MAPRE1 chr20 32839856 + USP28 chr11 113834335 - Exonic hg38 PRAD TCGA-EJ-7785-01A 7 52 In-Frame Inter-chr q11.21 q23.2 Seq+ 98790 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND4C-RHOBTB2 DENND4C chr9 19357154 + RHOBTB2 chr8 23004425 + Exonic hg38 PRAD TCGA-EJ-7785-01A 3 10 In-Frame Inter-chr p22.1 p21.3 Tumor suppressor gene Seq+ 98791 ChimerSeq TCGA FAWG TCGA_RNA-Seq SATB1-STAC SATB1 chr3 18378170 - STAC chr3 36443364 + Exonic hg38 PRAD TCGA-EJ-7785-01A 1 13 In-Frame Intra-chr p24.3 Transcription factor p22.3 Seq+ 98792 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA7-MMP9 PLEKHA7 chr11 16851191 - MMP9 chr20 46009866 + Exonic hg38 PRAD TCGA-EJ-7785-01A 1 10 In-Frame Inter-chr p15.1 q13.12 Seq+ 98793 ChimerSeq TCGA FAWG TCGA_RNA-Seq TET1-EFHC2 TET1 chr10 68682973 + EFHC2 chrX 44312756 - Exonic hg38 PRAD TCGA-EJ-7785-01A 1 8 In-Frame Inter-chr q21.3 Oncogene Transcription factor p11.3 Seq+ 98794 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITPR2-CLEC2A ITPR2 chr12 26550247 - CLEC2A chr12 9922232 - Exonic hg38 PRAD TCGA-EJ-7788-01A 14 60 Out-of-frame Intra-chr p11.23 p13.31 Seq+ 98795 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLEC12A-CLEC2A CLEC12A chr12 9971687 + CLEC2A chr12 9916803 - Exonic hg38 PRAD TCGA-EJ-7788-01A 3 5 Out-of-frame Intra-chr p13.31 p13.31 Seq+ 98796 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK9-DGKB MAPK9 chr5 180264781 - DGKB chr7 14621494 - Exonic hg38 PRAD TCGA-EJ-7789-01A 11 54 Out-of-frame Inter-chr q35.3 Tumor suppressor gene p21.2 Seq+ 98797 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMYD3-TRIM58 SMYD3 chr1 246327201 - TRIM58 chr1 247860617 + Exonic hg38 PRAD TCGA-EJ-7789-01A 4 13 In-Frame Intra-chr q44 Transcription factor q44 Seq+ 98798 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM56-SNX7 TMEM56 chr1 95151419 + SNX7 chr1 98760054 + Exonic hg38 PRAD TCGA-EJ-7789-01A 2 16 Out-of-frame Intra-chr p21.3 p21.3 98799 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNAP91-BCKDHB SNAP91 chr6 83575010 - BCKDHB chr6 80273135 + Exonic hg38 PRAD TCGA-EJ-7789-01A 3 10 In-Frame Intra-chr q14.2 q14.1 Seq+ 98800 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCKDHB-ME1 BCKDHB chr6 80203212 + ME1 chr6 83407901 - Exonic hg38 PRAD TCGA-EJ-7789-01A 3 5 In-Frame Intra-chr q14.1 q14.2 Seq+ 98801 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLGAP1-ARHGAP28 DLGAP1 chr18 4455006 - ARHGAP28 chr18 6824762 + Exonic hg38 PRAD TCGA-EJ-7791-01A 3 17 5'UTR-CDS Intra-chr p11.31 p11.31 Seq+ 98802 ChimerSeq TCGA FAWG TCGA_RNA-Seq CADM2-ROBO1 CADM2 chr3 84959668 + ROBO1 chr3 78627569 - Exonic hg38 PRAD TCGA-EJ-7791-01A 3 7 Out-of-frame Intra-chr p12.1 Tumor suppressor gene p12.3 Tumor suppressor gene Seq+ 98803 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBNL1-NMNAT3 MBNL1 chr3 152269092 + NMNAT3 chr3 139579055 - Exonic hg38 PRAD TCGA-EJ-7792-01A 8 79 5'UTR-5'UTR Intra-chr q25.1 q23 Seq+ 98804 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIGA1-PIGU MIGA1 chr1 77783351 + PIGU chr20 34637985 - Exonic hg38 PRAD TCGA-EJ-7792-01A 1 5 In-Frame Inter-chr p31.1 q11.22 98805 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERG-TMPRSS2 ERG chr21 38575662 - TMPRSS2 chr21 41494578 - Exonic hg38 PRAD TCGA-EJ-7793-01A 2 13 In-Frame Intra-chr q22.2 Oncogene Transcription factor q22.3 Seq+ 98806 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIMCH1-DNM1L LIMCH1 chr4 41360936 + DNM1L chr12 32722427 + Exonic hg38 PRAD TCGA-EJ-7793-01A 1 10 Out-of-frame Inter-chr p13 p11.21 Seq+ 98807 ChimerSeq TCGA FAWG TCGA_RNA-Seq HBS1L-IL9 HBS1L chr6 135050582 - IL9 chr5 135892510 - Exonic hg38 PRAD TCGA-EJ-7794-01A 23 171 Out-of-frame Inter-chr q23.3 q31.1 Seq+ 98808 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDLIM3-ENPP6 PDLIM3 chr4 185535342 - ENPP6 chr4 184153733 - Exonic hg38 PRAD TCGA-EJ-7794-01A 1 3 Out-of-frame Intra-chr q35.1 q35.1 98809 ChimerSeq TCGA FAWG TCGA_RNA-Seq RABEP2-SRCAP RABEP2 chr16 28919786 - SRCAP chr16 30728966 + Exonic hg38 PRAD TCGA-EJ-7794-01A 1 1 In-Frame Intra-chr p11.2 p11.2 Transcription factor 98810 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGZ-PRPSAP2 PIGZ chr3 196968687 - PRPSAP2 chr17 18889822 + Exonic hg38 PRAD TCGA-EJ-7797-01A 8 1 5'UTR-CDS Inter-chr q29 p11.2 Seq+ 98811 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERG-TAF8 ERG chr21 38575662 - TAF8 chr6 42051357 + Exonic hg38 PRAD TCGA-EJ-7797-01A 2 6 In-Frame Inter-chr q22.2 Oncogene Transcription factor p21.1 Seq+ 98812 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRCP-RAB30 PRCP chr11 82900235 - RAB30 chr11 82994122 - Exonic hg38 PRAD TCGA-EJ-8468-01A 5 11 In-Frame Intra-chr q14.1 q14.1 Seq+ 98813 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP39A1-FGGY CYP39A1 chr6 46642163 - FGGY chr1 59757931 + Exonic hg38 PRAD TCGA-EJ-8468-01A 1 8 In-Frame Inter-chr p12.3 p32.1 Seq+ 98814 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-MRPS6 TMPRSS2 chr21 41473325 - MRPS6 chr21 34125341 + Exonic hg38 PRAD TCGA-EJ-8469-01A 180 662 Out-of-frame Intra-chr q22.3 q22.11 Seq+ 98815 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM6A-ARHGAP6 KDM6A chrX 45059466 + ARHGAP6 chrX 11254707 - Exonic hg38 PRAD TCGA-EJ-8469-01A 20 63 In-Frame Intra-chr p11.3 Oncogene Tumor suppressor gene p22.2 Seq+ 98816 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLIM4-ZBBX GOLIM4 chr3 168095099 - ZBBX chr3 167282495 - Exonic hg38 PRAD TCGA-EJ-8469-01A 12 37 In-Frame Intra-chr q26.2 q26.1 Seq+ 98817 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1XR1-ADAM33 TBL1XR1 chr3 177197121 - ADAM33 chr20 3677143 - Exonic hg38 PRAD TCGA-EJ-8469-01A 7 47 5'UTR-CDS Inter-chr q26.32 p13 Seq+ 98818 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHTN1-DZANK1 SHTN1 chr10 117005022 - DZANK1 chr20 18415449 - Exonic hg38 PRAD TCGA-EJ-8469-01A 6 38 Out-of-frame Inter-chr q25.3 p11.23 98819 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRD4-AKAP8L BRD4 chr19 15332290 - AKAP8L chr19 15404042 - Exonic hg38 PRAD TCGA-EJ-8469-01A 5 9 5'UTR-CDS Intra-chr p13.12 Atypical:BRD p13.12 Transcription factor Seq+ 98820 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP6-KDM6A ARHGAP6 chrX 11427548 - KDM6A chrX 45061324 + Exonic hg38 PRAD TCGA-EJ-8469-01A 2 12 In-Frame Intra-chr p22.2 p11.3 Oncogene Tumor suppressor gene Seq+ 98821 ChimerSeq TCGA FAWG TCGA_RNA-Seq HK1-CTNNA3 HK1 chr10 69319010 + CTNNA3 chr10 66775524 - Exonic hg38 PRAD TCGA-EJ-8469-01A 2 11 In-Frame Intra-chr q22.1 q21.3 Tumor suppressor gene Seq+ 98822 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTD1-KIF16B DTD1 chr20 18628233 + KIF16B chr20 16515664 - Exonic hg38 PRAD TCGA-EJ-8469-01A 3 6 In-Frame Intra-chr p11.23 p12.1 Seq+ 98823 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEDD4L-ZC3H7A NEDD4L chr18 58252054 + ZC3H7A chr16 11782388 - Exonic hg38 PRAD TCGA-EJ-8470-01A 28 132 5'UTR-5'UTR Inter-chr q21.31 Tumor suppressor gene p13.13 Seq+ 98824 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEDD4L-BCAR4 NEDD4L chr18 58252054 + BCAR4 chr16 11828391 - Exonic hg38 PRAD TCGA-EJ-8470-01A 15 92 CDS-3'UTR Inter-chr q21.31 Tumor suppressor gene p13.13 Seq+ 98825 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMBRA1-TRPC6 AMBRA1 chr11 46593828 - TRPC6 chr11 101504798 - Exonic hg38 PRAD TCGA-EJ-8470-01A 9 18 5'UTR-CDS Intra-chr p11.2 q22.1 Seq+ 98826 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRYL-CNGA1 FRYL chr4 48684673 - CNGA1 chr4 48010893 - Exonic hg38 PRAD TCGA-EJ-8470-01A 1 8 5'UTR-5'UTR Intra-chr p11 p12 98827 ChimerSeq TCGA FAWG TCGA_RNA-Seq SORL1-NEK4 SORL1 chr11 121612832 + NEK4 chr3 52709935 - Exonic hg38 PRAD TCGA-EJ-8472-01A 25 167 CDS-3'UTR Inter-chr q24.1 p21.1 Other:NEK 98828 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUZ12-NF1 SUZ12 chr17 31966196 + NF1 chr17 31381873 + Exonic hg38 PRAD TCGA-EJ-8472-01A 1 13 CDS-3'UTR Intra-chr q11.2 Tumor suppressor gene q11.2 Oncogene Tumor suppressor gene Seq+ 98829 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-SARS TMPRSS2 chr21 41488394 - SARS chr1 109223978 + Exonic hg38 PRAD TCGA-EJ-8474-01A 45 240 In-Frame Inter-chr q22.3 p13.3 Seq+ 98830 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM13C-S100P FAM13C chr10 59352270 - S100P chr4 6696893 + Exonic hg38 PRAD TCGA-EJ-8474-01A 36 173 In-Frame Inter-chr q21.1 p16.1 Seq+ 98831 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCEA3-PRR16 TCEA3 chr1 23417249 - PRR16 chr5 120685954 + Exonic hg38 PRAD TCGA-EJ-8474-01A 1 14 5'UTR-5'UTR Inter-chr q23.1 98832 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSTO1-INA GSTO1 chr10 104263077 + INA chr10 103287035 + Exonic hg38 PRAD TCGA-EJ-8474-01A 2 1 In-Frame Intra-chr q25.1 q24.33 98833 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMKK2-KDM2B CAMKK2 chr12 121269528 - KDM2B chr12 121494665 - Exonic hg38 PRAD TCGA-EJ-A46B-01A 3 3 In-Frame Intra-chr q24.31 q24.31 Transcription factor Seq+ 98834 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACPP-ARFIP1 ACPP chr3 132317576 + ARFIP1 chr4 152863606 + Exonic hg38 PRAD TCGA-EJ-A46D-01A 1 4 In-Frame Inter-chr q22.1 q31.3 98835 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTN4-MGST2 ACTN4 chr19 38647907 + MGST2 chr4 139695197 + Exonic hg38 PRAD TCGA-EJ-A46E-01A 2 6 3'UTR-CDS Inter-chr q31.1 Seq+ 98836 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSGALNACT1-TMEM150A CSGALNACT1 chr8 19458426 - TMEM150A chr2 85599702 - Exonic hg38 PRAD TCGA-EJ-A46F-01A 7 26 Out-of-frame Inter-chr p21.3 p11.2 Seq+ 98837 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRL2-AK5 ADGRL2 chr1 81837057 + AK5 chr1 77293793 + Exonic hg38 PRAD TCGA-EJ-A46G-01A 54 189 In-Frame Intra-chr p31.1 p31.1 Seq+ 98838 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEF2-SLC25A23 EEF2 chr19 3983110 - SLC25A23 chr19 6436464 - Exonic hg38 PRAD TCGA-EJ-A46G-01A 26 259 CDS-3'UTR Intra-chr p13.3 p13.3 Seq+ 98839 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRYL-OCIAD2 FRYL chr4 48684673 - OCIAD2 chr4 48885565 - Exonic hg38 PRAD TCGA-EJ-A46G-01A 14 179 5'UTR-CDS Intra-chr p11 p11 Seq+ 98840 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM160B1-VTI1A FAM160B1 chr10 114836246 + VTI1A chr10 112668218 + Exonic hg38 PRAD TCGA-EJ-A46G-01A 10 35 Out-of-frame Intra-chr q25.3 q25.2 Seq+ 98841 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK1-NARS2 PAK1 chr11 77473552 - NARS2 chr11 78571444 - Exonic hg38 PRAD TCGA-EJ-A46G-01A 8 29 5'UTR-5'UTR Intra-chr q14.1 STE:STE20 q14.1 Seq+ 98842 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK2-NTSR2 ROCK2 chr2 11343996 - NTSR2 chr2 11658722 - Exonic hg38 PRAD TCGA-EJ-A46G-01A 4 30 Out-of-frame Intra-chr p25.1 AGC:DMPK p25.1 Seq+ 98843 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARPC1A-TRRAP ARPC1A chr7 99333417 + TRRAP chr7 98981769 + Exonic hg38 PRAD TCGA-EJ-A46G-01A 6 12 In-Frame Intra-chr q22.1 q22.1 Atypical:PIKK Oncogene Seq+ 98844 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEDD4L-SPINT2 NEDD4L chr18 58165861 + SPINT2 chr19 38283627 + Exonic hg38 PRAD TCGA-EJ-A46G-01A 1 23 Out-of-frame Inter-chr q21.31 Tumor suppressor gene q13.2 Tumor suppressor gene 98845 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC6-FAM177A1 TTC6 chr14 37606742 + FAM177A1 chr14 35053278 + Exonic hg38 PRAD TCGA-EJ-A46G-01A 3 14 In-Frame Intra-chr q21.1 q13.2 Seq+ 98846 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC6-KIAA0391 TTC6 chr14 37606742 + KIAA0391 chr14 35266727 + Exonic hg38 PRAD TCGA-EJ-A46G-01A 2 15 Out-of-frame Intra-chr q21.1 q13.2 Seq+ 98847 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP5H-GRB2 ATP5H chr17 75042181 - GRB2 chr17 75332797 - Exonic hg38 PRAD TCGA-EJ-A46G-01A 4 6 Out-of-frame Intra-chr q25.1 q25.1 98848 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC10-UBASH3A TRAPPC10 chr21 44084263 + UBASH3A chr21 42413024 + Exonic hg38 PRAD TCGA-EJ-A46G-01A 4 3 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 98849 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHST8-PDCD5 CHST8 chr19 33622296 + PDCD5 chr19 32582195 + Exonic hg38 PRAD TCGA-EJ-A46G-01A 1 10 5'UTR-CDS Intra-chr q13.11 q13.11 Tumor suppressor gene Seq+ 98850 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIMCH1-UCHL1 LIMCH1 chr4 41524478 + UCHL1 chr4 41256593 + Exonic hg38 PRAD TCGA-EJ-A46G-01A 2 3 5'UTR-5'UTR Intra-chr p13 p13 Tumor suppressor gene Seq+ 98851 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKAG2-KMT2C PRKAG2 chr7 151675420 - KMT2C chr7 152163826 - Exonic hg38 PRAD TCGA-EJ-A46G-01A 1 4 In-Frame Intra-chr q36.1 q36.1 Oncogene Tumor suppressor gene 98852 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBLB-KIAA1524 CBLB chr3 105853414 - KIAA1524 chr3 108585212 - Exonic hg38 PRAD TCGA-EJ-A46G-01A 1 2 Out-of-frame Intra-chr q13.11 q13.13 Seq+ 98853 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTN1-C14orf39 RTN1 chr14 59745708 - C14orf39 chr14 60442131 - Exonic hg38 PRAD TCGA-EJ-A46G-01A 1 2 Out-of-frame Intra-chr q23.1 q23.1 98854 ChimerSeq TCGA FAWG TCGA_RNA-Seq FIP1L1-SLC38A8 FIP1L1 chr4 53440608 + SLC38A8 chr16 84013052 - Exonic hg38 PRAD TCGA-EJ-A65B-01A 42 151 In-Frame Inter-chr q12 q23.3 Seq+ 98855 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALG11-JPH3 ALG11 chr13 52024937 + JPH3 chr16 87696580 + Exonic hg38 PRAD TCGA-EJ-A65B-01A 1 7 Out-of-frame Inter-chr q14.3 q24.2 98856 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1671-SNRPD3 KIAA1671 chr22 25049364 + SNRPD3 chr22 24557657 + Exonic hg38 PRAD TCGA-EJ-A65B-01A 2 2 CDS-5'UTR Intra-chr q11.23 q11.23 98857 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERG-TMPRSS2 ERG chr21 38575662 - TMPRSS2 chr21 41480602 - Exonic hg38 PRAD TCGA-EJ-A65D-01A 5 7 Out-of-frame Intra-chr q22.2 Oncogene Transcription factor q22.3 Seq+ 98858 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP7-POLR2J MAP7 chr6 136365735 - POLR2J chr7 102476270 - Exonic hg38 PRAD TCGA-EJ-A65D-01A 3 3 Out-of-frame Inter-chr q23.3 q22.1 98859 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC58-LSAMP LRRC58 chr3 120348744 - LSAMP chr3 116086556 - Exonic hg38 PRAD TCGA-EJ-A65D-01A 1 3 In-Frame Intra-chr q13.33 q13.31 Tumor suppressor gene Seq+ 98860 ChimerSeq TCGA FAWG TCGA_RNA-Seq DUSP22-PTK7 DUSP22 chr6 348841 + PTK7 chr6 43138849 + Exonic hg38 PRAD TCGA-EJ-A65E-01A 4 16 In-Frame Intra-chr p25.3 Tumor suppressor gene p21.1 Seq+ 98861 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP7-CITED2 MAP7 chr6 136550342 - CITED2 chr6 139373952 - Exonic hg38 PRAD TCGA-EJ-A65F-01A 1 42 In-Frame Intra-chr q23.3 q24.1 Tumor suppressor gene Seq+ 98862 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC38A10-CYB5D2 SLC38A10 chr17 81289691 - CYB5D2 chr17 4149891 + Exonic hg38 PRAD TCGA-EJ-A65G-01A 2 1 In-Frame Intra-chr q25.3 p13.2 98863 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL12A1-TDRD3 COL12A1 chr6 75091490 - TDRD3 chr13 60567525 + Exonic hg38 PRAD TCGA-EJ-A65G-01A 1 1 In-Frame Inter-chr q14.1 q21.2 98864 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMKK2-KDM2B CAMKK2 chr12 121270898 - KDM2B chr12 121453344 - Exonic hg38 PRAD TCGA-EJ-A65J-01A 3 54 In-Frame Intra-chr q24.31 q24.31 Transcription factor Seq+ 98865 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP18-THEMIS ARHGAP18 chr6 129710024 - THEMIS chr6 127901081 - Exonic hg38 PRAD TCGA-EJ-A65J-01A 5 20 CDS-5'UTR Intra-chr q22.33 Seq+ 98866 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRA10AC1-PDE6C FRA10AC1 chr10 93670770 - PDE6C chr10 93658901 + Exonic hg38 PRAD TCGA-EJ-A65J-01A 4 15 In-Frame Intra-chr q23.33 q23.33 Seq+ 98867 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLPP5-SARAF PLPP5 chr8 38267267 - SARAF chr8 30070059 - Exonic hg38 PRAD TCGA-EJ-A65M-01A 2 7 Out-of-frame Intra-chr p11.23 p12 98868 ChimerSeq TCGA FAWG TCGA_RNA-Seq ORC5-FGGY ORC5 chr7 104183943 - FGGY chr1 59757931 + Exonic hg38 PRAD TCGA-EJ-A65M-01A 1 4 Out-of-frame Inter-chr q22.2 p32.1 98869 ChimerSeq TCGA FAWG TCGA_RNA-Seq BBS7-PLA1A BBS7 chr4 121867981 - PLA1A chr3 119608770 + Exonic hg38 PRAD TCGA-EJ-A65M-01A 1 3 Out-of-frame Inter-chr q27 q13.33 98870 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM193A-PLPP5 FAM193A chr4 2716104 + PLPP5 chr8 38266311 - Exonic hg38 PRAD TCGA-EJ-A65M-01A 1 3 Out-of-frame Inter-chr p16.3 p11.23 98871 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLM1-ZCCHC6 GOLM1 chr9 86033282 - ZCCHC6 chr9 86288744 - Exonic hg38 PRAD TCGA-EJ-A6RA-01A 3 5 Out-of-frame Intra-chr q21.33 q21.33 Seq+ 98872 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABRACL-PERP ABRACL chr6 139034221 + PERP chr6 138096494 - Exonic hg38 PRAD TCGA-EJ-A6RA-01A 2 1 In-Frame Intra-chr q24.1 q23.3 98873 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC26A4-NNMT SLC26A4 chr7 107702057 + NNMT chr11 114262848 + Exonic hg38 PRAD TCGA-EJ-A6RC-01A 5 7 CDS-5'UTR Inter-chr q22.3 q23.2 Seq+ 98874 ChimerSeq TCGA FAWG TCGA_RNA-Seq MALT1-SLC26A4 MALT1 chr18 58735329 + SLC26A4 chr7 107698042 + Exonic hg38 PRAD TCGA-EJ-A6RC-01A 2 2 Out-of-frame Inter-chr q21.32 Oncogene q22.3 98875 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFDN-EXOC6B AFDN chr6 167902386 + EXOC6B chr2 72575668 - Exonic hg38 PRAD TCGA-EJ-A7NF-01A 2 8 In-Frame Inter-chr q27 p13.2 98876 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACER2-C8orf37 ACER2 chr9 19435084 + C8orf37 chr8 95263774 - Exonic hg38 PRAD TCGA-EJ-A7NF-01A 1 5 In-Frame Inter-chr p22.1 q22.1 Seq+ 98877 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIRC2-DDT DIRC2 chr3 122806950 + DDT chr22 23971623 - Exonic hg38 PRAD TCGA-EJ-A7NH-01A 4 30 Out-of-frame Inter-chr q21.1 Seq+ 98878 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDT-ACPP DDT chr22 23973768 - ACPP chr3 132356686 + Exonic hg38 PRAD TCGA-EJ-A7NH-01A 1 8 5'UTR-CDS Inter-chr q22.1 Seq+ 98879 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUL4A-DLEU7 CUL4A chr13 113210088 + DLEU7 chr13 50823520 - Exonic hg38 PRAD TCGA-EJ-A7NH-01A 1 3 In-Frame Intra-chr q34 q14.3 98880 ChimerSeq TCGA FAWG TCGA_RNA-Seq PATJ-SGIP1 PATJ chr1 61808530 + SGIP1 chr1 66625847 + Exonic hg38 PRAD TCGA-EJ-A7NK-01A 5 2 Out-of-frame Intra-chr p31.3 p31.3 98881 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMD1-MBOAT2 AMD1 chr6 110888983 + MBOAT2 chr2 8864234 - Exonic hg38 PRAD TCGA-EJ-A7NK-01A 2 8 In-Frame Inter-chr q21 p25.1 Seq+ 98882 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-AES FGFR3 chr4 1806934 + AES chr19 3061257 - Exonic hg38 PRAD TCGA-EJ-A7NM-01A 69 494 Out-of-frame Inter-chr p16.3 TK:FGFR Oncogene p13.3 Seq+ 98883 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEFF2-SRPK2 TMEFF2 chr2 191998262 - SRPK2 chr7 105268869 - Exonic hg38 PRAD TCGA-EJ-A7NM-01A 2 4 In-Frame Inter-chr q32.3 Tumor suppressor gene q22.3 CMGC:SRPK 98884 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBOAT2-BRAT1 MBOAT2 chr2 9003540 - BRAT1 chr7 2547478 - Exonic hg38 PRAD TCGA-EJ-A7NM-01A 2 3 Out-of-frame Inter-chr p25.1 p22.3 Seq+ 98885 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC37A3-FLYWCH2 SLC37A3 chr7 140343412 - FLYWCH2 chr16 2895220 + Exonic hg38 PRAD TCGA-EJ-A7NN-01A 16 35 CDS-5'UTR Inter-chr q34 p13.3 Seq+ 98886 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUFU-CYP26A1 SUFU chr10 102617428 + CYP26A1 chr10 93075826 + Exonic hg38 PRAD TCGA-EJ-A7NN-01A 2 24 In-Frame Intra-chr q24.32 Oncogene Tumor suppressor gene q23.33 Seq+ 98887 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCB1-HRASLS2 SMARCB1 chr22 23816936 + HRASLS2 chr11 63553065 - Exonic hg38 PRAD TCGA-EJ-A7NN-01A 1 18 Out-of-frame Inter-chr q11.23 Oncogene Tumor suppressor gene q12.3 Tumor suppressor gene Seq+ 98888 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELK4-ZNF350 ELK4 chr1 205618957 - ZNF350 chr19 51974531 - Exonic hg38 PRAD TCGA-EJ-A7NN-01A 1 17 CDS-5'UTR Inter-chr q32.1 Transcription factor q13.41 Transcription factor Seq+ 98889 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-CALB1 TMPRSS2 chr21 41476577 - CALB1 chr8 90060700 - Exonic hg38 PRAD TCGA-EJ-A7NN-01A 2 8 Out-of-frame Inter-chr q22.3 q21.3 Seq+ 98890 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHCHD1-SUFU CHCHD1 chr10 73782441 + SUFU chr10 102627175 + Exonic hg38 PRAD TCGA-EJ-A7NN-01A 3 3 In-Frame Intra-chr q22.2 q24.32 Oncogene Tumor suppressor gene 98891 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF142-POLR1B ZNF142 chr2 218658980 - POLR1B chr2 112550866 + Exonic hg38 PRAD TCGA-EJ-A7NN-01A 1 6 5'UTR-5'UTR Intra-chr q35 Transcription factor q14.1 Seq+ 98892 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSBP1-PON1 SSBP1 chr7 141738410 + PON1 chr7 95318393 - Exonic hg38 PRAD TCGA-EJ-A8FN-01A 8 3 3'UTR-CDS Intra-chr q21.3 Seq+ 98893 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRPK2-INTS4P1 SRPK2 chr7 105388648 - INTS4P1 chr7 65200618 + Exonic hg38 PRAD TCGA-EJ-A8FN-01A 3 11 5'UTR-5'UTR Intra-chr q22.3 CMGC:SRPK q11.21 98894 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP3S1-C1orf100 AP3S1 chr5 115842106 + C1orf100 chr1 244375372 + Exonic hg38 PRAD TCGA-EJ-A8FN-01A 1 2 Out-of-frame Inter-chr q22.3 q44 98895 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF12-NPAS1 TCF12 chr15 56921098 + NPAS1 chr19 47039036 + Exonic hg38 PRAD TCGA-EJ-A8FO-01A 6 28 In-Frame Inter-chr q21.3 Oncogene Transcription factor q13.32 Transcription factor Seq+ 98896 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFAT5-PLCG2 NFAT5 chr16 69566374 + PLCG2 chr16 81755870 + Exonic hg38 PRAD TCGA-EJ-A8FO-01A 3 9 5'UTR-5'UTR Intra-chr q22.1 Transcription factor q23.3 98897 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF618-MTAP ZNF618 chr9 113876413 + MTAP chr9 21815433 + Exonic hg38 PRAD TCGA-EJ-A8FO-01A 1 4 In-Frame Intra-chr q32 Transcription factor p21.3 Tumor suppressor gene Seq+ 98898 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNA1C-WWP2 CACNA1C chr12 2120430 + WWP2 chr16 69786996 + Exonic hg38 PRAD TCGA-EJ-A8FO-01A 1 3 3'UTR-5'UTR Inter-chr p13.33 q22.1 Seq+ 98899 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLPX-IGDCC4 CLPX chr15 65185075 - IGDCC4 chr15 65394548 - Exonic hg38 PRAD TCGA-EJ-A8FS-01A 9 29 In-Frame Intra-chr q22.31 q22.31 Seq+ 98900 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEK7-CD1C NEK7 chr1 198157276 + CD1C chr1 158291134 + Exonic hg38 PRAD TCGA-EJ-A8FS-01A 4 24 5'UTR-CDS Intra-chr q31.3 Other:NEK q23.1 Seq+ 98901 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRF1-PDIA4 NRF1 chr7 129727365 + PDIA4 chr7 149021147 - Exonic hg38 PRAD TCGA-EJ-A8FU-01A 1 2 In-Frame Intra-chr q32.2 Tumor suppressor gene Transcription factor q36.1 98902 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTAR1-ABHD17B PTAR1 chr9 69741792 - ABHD17B chr9 71862607 - Exonic hg38 PRAD TCGA-EJ-AB27-01A 9 27 Out-of-frame Intra-chr q21.12 q21.13 Seq+ 98903 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV3-C1orf61 ETV3 chr1 157134112 - C1orf61 chr1 156430119 - Exonic hg38 PRAD TCGA-EJ-AB27-01A 1 7 CDS-5'UTR Intra-chr q23.1 Transcription factor q22 98904 ChimerSeq TCGA FAWG TCGA_RNA-Seq PMPCB-PRKAR2B PMPCB chr7 103312131 + PRKAR2B chr7 107121952 + Exonic hg38 PRAD TCGA-FC-7708-01A 7 26 CDS-3'UTR Intra-chr q22.1 Seq+ 98905 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP1-OS9 LRP1 chr12 57129031 + OS9 chr12 57694750 + Exonic hg38 PRAD TCGA-FC-7708-01A 2 7 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 98906 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPDU1-GLP2R MPDU1 chr17 7583965 + GLP2R chr17 9833807 + Exonic hg38 PRAD TCGA-FC-7708-01A 2 7 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 98907 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP3CC-GPR141 PPP3CC chr8 22441458 + GPR141 chr7 37740380 + Exonic hg38 PRAD TCGA-FC-7708-01A 3 3 CDS-5'UTR Inter-chr p21.3 Tumor suppressor gene p14.1 98908 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSK3B-COX17 GSK3B chr3 119863419 - COX17 chr3 119675233 - Exonic hg38 PRAD TCGA-FC-7708-01A 1 6 Out-of-frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q13.33 Seq+ 98909 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KC1-VASH2 RPS6KC1 chr1 213176492 + VASH2 chr1 212988512 + Exonic hg38 PRAD TCGA-FC-7961-01A 2 26 Out-of-frame Intra-chr q32.3 q32.3 Seq+ 98910 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDS5B-PSPC1 PDS5B chr13 32586593 + PSPC1 chr13 19677823 - Exonic hg38 PRAD TCGA-FC-7961-01A 1 1 5'UTR-CDS Intra-chr q13.1 Tumor suppressor gene q12.11 98911 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM68-DPYS TMEM68 chr8 55743481 - DPYS chr8 104424389 - Exonic hg38 PRAD TCGA-FC-A4JI-01A 82 288 In-Frame Intra-chr q12.1 q22.3 Seq+ 98912 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRG1-STMN2 NRG1 chr8 32605683 + STMN2 chr8 79636802 + Exonic hg38 PRAD TCGA-FC-A4JI-01A 17 71 In-Frame Intra-chr p12 q21.13 Seq+ 98913 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAP1L4-ATP11B NAP1L4 chr11 2964680 - ATP11B chr3 182913861 + Exonic hg38 PRAD TCGA-FC-A4JI-01A 8 101 5'UTR-CDS Inter-chr q26.33 Oncogene Seq+ 98914 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA2-EIF4EBP1 NCOA2 chr8 70403700 - EIF4EBP1 chr8 38057081 + Exonic hg38 PRAD TCGA-FC-A4JI-01A 11 84 5'UTR-CDS Intra-chr q13.3 Oncogene Transcription factor p11.23 Seq+ 98915 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPIDR-SLA SPIDR chr8 47407961 + SLA chr8 133075130 - Exonic hg38 PRAD TCGA-FC-A4JI-01A 13 53 5'UTR-5'UTR Intra-chr q11.21 q24.22 Seq+ 98916 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC21B-COBLL1 TTC21B chr2 165858215 - COBLL1 chr2 164743875 - Exonic hg38 PRAD TCGA-FC-A4JI-01A 6 34 3'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 98917 ChimerSeq TCGA FAWG TCGA_RNA-Seq CADM2-UBE2E2 CADM2 chr3 84959668 + UBE2E2 chr3 23532554 + Exonic hg38 PRAD TCGA-FC-A4JI-01A 6 16 Out-of-frame Intra-chr p12.1 Tumor suppressor gene p24.3 Seq+ 98918 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53TG1-SLC4A4 TP53TG1 chr7 87341523 - SLC4A4 chr4 71339370 + Exonic hg38 PRAD TCGA-FC-A4JI-01A 4 8 3'UTR-CDS Inter-chr q21.12 q13.3 Seq+ 98919 ChimerSeq TCGA FAWG TCGA_RNA-Seq COBLL1-FIGN COBLL1 chr2 164779655 - FIGN chr2 163593796 - Exonic hg38 PRAD TCGA-FC-A4JI-01A 1 17 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 98920 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPZA2-CMSS1 CAPZA2 chr7 116888190 + CMSS1 chr3 100146973 + Exonic hg38 PRAD TCGA-FC-A4JI-01A 2 9 In-Frame Inter-chr q31.2 q12.1 Seq+ 98921 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCGEM1-KBTBD12 PCGEM1 chr2 192750872 + KBTBD12 chr3 127927764 + Exonic hg38 PRAD TCGA-FC-A4JI-01A 2 8 5'UTR-CDS Inter-chr q32.3 q21.3 Seq+ 98922 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUL5-OPCML CUL5 chr11 108009372 + OPCML chr11 132437359 - Exonic hg38 PRAD TCGA-FC-A4JI-01A 2 7 Out-of-frame Intra-chr q22.3 Tumor suppressor gene q25 Tumor suppressor gene Seq+ 98923 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP7-ABI3BP SENP7 chr3 101493873 - ABI3BP chr3 100834773 - Exonic hg38 PRAD TCGA-FC-A4JI-01A 1 9 Out-of-frame Intra-chr q12.3 q12.2 98924 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSK3B-TSC22D2 GSK3B chr3 119905755 - TSC22D2 chr3 150457076 + Exonic hg38 PRAD TCGA-FC-A4JI-01A 1 8 Out-of-frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q25.1 Seq+ 98925 ChimerSeq TCGA FAWG TCGA_RNA-Seq RB1CC1-MMP16 RB1CC1 chr8 52683549 - MMP16 chr8 88074743 - Exonic hg38 PRAD TCGA-FC-A4JI-01A 2 3 In-Frame Intra-chr q11.23 Tumor suppressor gene q21.3 Seq+ 98926 ChimerSeq TCGA FAWG TCGA_RNA-Seq MMP16-ZFHX4 MMP16 chr8 88074605 - ZFHX4 chr8 76833338 + Exonic hg38 PRAD TCGA-FC-A4JI-01A 1 5 In-Frame Intra-chr q21.3 q21.13 Transcription factor 98927 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A3-ZBTB7B SLC45A3 chr1 205680394 - ZBTB7B chr1 155014655 + Exonic hg38 PRAD TCGA-FC-A5OB-01A 50 254 5'UTR-5'UTR Intra-chr q32.1 q21.3 Transcription factor Seq+ 98928 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB7B-NUCKS1 ZBTB7B chr1 155002943 + NUCKS1 chr1 205729621 - Exonic hg38 PRAD TCGA-FC-A5OB-01A 4 71 5'UTR-CDS Intra-chr q21.3 Transcription factor q32.1 Seq+ 98929 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAST2-COQ6 MAST2 chr1 46008371 + COQ6 chr14 73958971 + Exonic hg38 PRAD TCGA-FC-A5OB-01A 5 7 In-Frame Inter-chr p34.1 AGC:MAST q24.3 Seq+ 98930 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALNT3-CCDC77 B4GALNT3 chr12 460545 + CCDC77 chr12 438335 + Exonic hg38 PRAD TCGA-FC-A66V-01A 1 1 Out-of-frame Intra-chr p13.33 p13.33 Seq+ 98931 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-BRAF TMPRSS2 chr21 41494356 - BRAF chr7 140781693 - Exonic hg38 PRAD TCGA-FC-A6HD-01A 29 141 Out-of-frame Inter-chr q22.3 q34 TKL:RAF Oncogene Seq+ 98932 ChimerSeq TCGA FAWG TCGA_RNA-Seq LETM1-FMC1 LETM1 chr4 1832744 - FMC1 chr7 139345501 + Exonic hg38 PRAD TCGA-FC-A6HD-01A 4 69 In-Frame Inter-chr p16.3 q34 98933 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAAF5-PLCXD2 DNAAF5 chr7 729847 + PLCXD2 chr3 111778268 + Exonic hg38 PRAD TCGA-FC-A6HD-01A 8 47 5'UTR-CDS Inter-chr p22.3 q13.2 98934 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53-CD68 TP53 chr17 7687377 - CD68 chr17 7580711 + Exonic hg38 PRAD TCGA-G9-6329-01A 22 297 5'UTR-CDS Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.1 Seq+ 98935 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA3-COX8C LAMA3 chr18 23847668 + COX8C chr14 93348028 + Exonic hg38 PRAD TCGA-G9-6329-01A 2 17 CDS-3'UTR Inter-chr q11.2 Seq+ 98936 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEFF2-CHMP1A TMEFF2 chr2 192179668 - CHMP1A chr16 89647331 - Exonic hg38 PRAD TCGA-G9-6332-01A 1 3 In-Frame Inter-chr q32.3 Tumor suppressor gene q24.3 98937 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC1-MLIP LRRC1 chr6 53913969 + MLIP chr6 54257308 + Exonic hg38 PRAD TCGA-G9-6333-01A 2 62 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 98938 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSK3B-ATP11B GSK3B chr3 120002046 - ATP11B chr3 182913861 + Exonic hg38 PRAD TCGA-G9-6333-01A 3 13 In-Frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q26.33 Oncogene Seq+ 98939 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMKK2-KDM2B CAMKK2 chr12 121270898 - KDM2B chr12 121453344 - Exonic hg38 PRAD TCGA-G9-6333-01A 2 12 In-Frame Intra-chr q24.31 q24.31 Transcription factor Seq+ 98940 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNS3-NUDCD3 TNS3 chr7 47396800 - NUDCD3 chr7 44383756 - Exonic hg38 PRAD TCGA-G9-6333-01A 1 12 CDS-3'UTR Intra-chr p12.3 p13 98941 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3R3-TRPM8 PIK3R3 chr1 46043654 - TRPM8 chr2 234017299 + Exonic hg38 PRAD TCGA-G9-6333-01A 1000 1000 3'UTR-3'UTR Inter-chr p34.1 q37.1 98942 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205680394 - ETV1 chr7 13935896 - Exonic hg38 PRAD TCGA-G9-6336-01A 2 3 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 98943 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRAP-SLC35A4 NRAP chr10 113588969 - SLC35A4 chr5 140568158 + Exonic hg38 PRAD TCGA-G9-6338-01A 8 1 Out-of-frame Inter-chr q25.3 q31.3 Seq+ 98944 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUDT3-MAPK8 NUDT3 chr6 34392264 - MAPK8 chr10 48431193 + Exonic hg38 PRAD TCGA-G9-6338-01A 1 1 Out-of-frame Inter-chr p21.31 q11.22 Oncogene 98945 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4-CCDC12 MAP4 chr3 47870813 - CCDC12 chr3 46941065 - Exonic hg38 PRAD TCGA-G9-6339-01A 4 76 In-Frame Intra-chr p21.31 p21.31 Seq+ 98946 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX15-ETV1 DHX15 chr4 24584323 - ETV1 chr7 13935896 - Exonic hg38 PRAD TCGA-G9-6339-01A 9 35 5'UTR-CDS Inter-chr p15.2 p21.2 Oncogene Transcription factor Seq+ 98947 ChimerSeq TCGA FAWG TCGA_RNA-Seq RYBP-CNTN4 RYBP chr3 72446496 - CNTN4 chr3 2736215 + Exonic hg38 PRAD TCGA-G9-6339-01A 2 11 5'UTR-CDS Intra-chr p26.3 Seq+ 98948 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALCAM-NRROS ALCAM chr3 105524508 + NRROS chr3 196654527 + Exonic hg38 PRAD TCGA-G9-6339-01A 1 8 CDS-5'UTR Intra-chr q13.11 q29 98949 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG4C-LEPR ATG4C chr1 62841547 + LEPR chr1 65633152 + Exonic hg38 PRAD TCGA-G9-6342-01A 5 7 In-Frame Intra-chr p31.3 p31.3 Seq+ 98950 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC30A4-CLRN2 SLC30A4 chr15 45521964 - CLRN2 chr4 17526817 + Exonic hg38 PRAD TCGA-G9-6342-01A 1 11 In-Frame Inter-chr q21.1 p15.32 98951 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRR15L-KCNH4 PRR15L chr17 47957657 - KCNH4 chr17 42157118 - Exonic hg38 PRAD TCGA-G9-6348-01A 30 205 5'UTR-3'UTR Intra-chr q21.32 q21.2 Seq+ 98952 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRR15L-RAB5C PRR15L chr17 47957657 - RAB5C chr17 42130590 - Exonic hg38 PRAD TCGA-G9-6348-01A 17 149 5'UTR-5'UTR Intra-chr q21.32 q21.2 Seq+ 98953 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACVR2A-AKT3 ACVR2A chr2 147845207 + AKT3 chr1 243664883 - Exonic hg38 PRAD TCGA-G9-6348-01A 5 9 CDS-5'UTR Inter-chr q22.3 Oncogene AGC:Akt Oncogene Seq+ 98954 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM217B-CDH12 FAM217B chr20 59942512 + CDH12 chr5 21975385 - Exonic hg38 PRAD TCGA-G9-6348-01A 5 9 5'UTR-CDS Inter-chr q13.33 p14.3 Seq+ 98955 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP1B-SLC27A2 MAP1B chr5 72115799 + SLC27A2 chr15 50197500 + Exonic hg38 PRAD TCGA-G9-6348-01A 2 8 In-Frame Inter-chr q13.2 q21.2 Seq+ 98956 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H15-SERINC1 ZC3H15 chr2 186486457 + SERINC1 chr6 122458681 - Exonic hg38 PRAD TCGA-G9-6348-01A 2 3 In-Frame Inter-chr q32.1 q22.31 Seq+ 98957 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0141-NMI KIAA0141 chr5 141934586 + NMI chr2 151282954 - Exonic hg38 PRAD TCGA-G9-6348-01A 2 1 Out-of-frame Inter-chr q31.3 q23.3 98958 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-HDLBP TMPRSS2 chr21 41476577 - HDLBP chr2 241228410 - Exonic hg38 PRAD TCGA-G9-6351-01A 338 2627 Out-of-frame Inter-chr q22.3 q37.3 Seq+ 98959 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205680394 - ERG chr21 38445621 - Exonic hg38 PRAD TCGA-G9-6351-01A 36 193 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 98960 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP45-RIOK1 USP45 chr6 99508610 - RIOK1 chr6 7417331 + Exonic hg38 PRAD TCGA-G9-6351-01A 7 46 In-Frame Intra-chr q16.2 p24.3 Atypical:RIO Seq+ 98961 ChimerSeq TCGA FAWG TCGA_RNA-Seq NINL-NAA20 NINL chr20 25526408 - NAA20 chr20 20026784 + Exonic hg38 PRAD TCGA-G9-6351-01A 8 22 Out-of-frame Intra-chr p11.21 p11.23 Seq+ 98962 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDLBP-TMPRSS2 HDLBP chr2 241233820 - TMPRSS2 chr21 41473496 - Exonic hg38 PRAD TCGA-G9-6351-01A 2 15 Out-of-frame Inter-chr q37.3 q22.3 98963 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 41494356 - ETV4 chr17 43530181 - Exonic hg38 PRAD TCGA-G9-6351-01A 1 5 In-Frame Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 98964 ChimerSeq TCGA FAWG TCGA_RNA-Seq GMDS-CCND3 GMDS chr6 2245321 - CCND3 chr6 41937394 - Exonic hg38 PRAD TCGA-G9-6353-01A 1 11 In-Frame Intra-chr p25.3 p21.1 Seq+ 98965 ChimerSeq TCGA FAWG TCGA_RNA-Seq WRB-BACE2 WRB chr21 39391836 + BACE2 chr21 41275371 + Exonic hg38 PRAD TCGA-G9-6353-01A 1 5 Out-of-frame Intra-chr q22.2 q22.2 98966 ChimerSeq TCGA FAWG TCGA_RNA-Seq RREB1-GABARAPL1 RREB1 chr6 7231907 + GABARAPL1 chr12 10218063 + Exonic hg38 PRAD TCGA-G9-6353-01A 1 3 Out-of-frame Inter-chr p24.3 Transcription factor p13.2 Seq+ 98967 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNC1LI1-MRPS11 DYNC1LI1 chr3 32541037 - MRPS11 chr15 88476989 + Exonic hg38 PRAD TCGA-G9-6354-01A 6 50 In-Frame Inter-chr p22.3 q25.3 Seq+ 98968 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN2-TRIM37 ATXN2 chr12 111485271 - TRIM37 chr17 59001714 - Exonic hg38 PRAD TCGA-G9-6354-01A 4 31 In-Frame Inter-chr q24.12 q22 Seq+ 98969 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCAT14-TRIOBP PCAT14 chr22 23538838 + TRIOBP chr22 37765670 + Exonic hg38 PRAD TCGA-G9-6356-01A 221 822 5'UTR-CDS Intra-chr q11.23 q13.1 98970 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF207-ETV4 ZNF207 chr17 32365398 + ETV4 chr17 43536479 - Exonic hg38 PRAD TCGA-G9-6356-01A 25 73 Out-of-frame Intra-chr q11.2 Transcription factor q21.31 Oncogene Transcription factor 98971 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAREM1-NEDD4L GAREM1 chr18 32470308 - NEDD4L chr18 58165788 + Exonic hg38 PRAD TCGA-G9-6356-01A 1 4 Out-of-frame Intra-chr q12.1 q21.31 Tumor suppressor gene 98972 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-PCBD1 UVRAG chr11 75912039 + PCBD1 chr10 70884048 - Exonic hg38 PRAD TCGA-G9-6361-01A 9 87 Out-of-frame Inter-chr q13.5 Tumor suppressor gene q22.1 Seq+ 98973 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIK2-PIR SIK2 chr11 111712375 + PIR chrX 15459740 - Exonic hg38 PRAD TCGA-G9-6361-01A 9 86 In-Frame Inter-chr q23.1 p22.2 Seq+ 98974 ChimerSeq TCGA FAWG TCGA_RNA-Seq EMSY-CDH23 EMSY chr11 76447008 + CDH23 chr10 71730469 + Exonic hg38 PRAD TCGA-G9-6361-01A 4 14 Out-of-frame Inter-chr q13.5 q22.1 98975 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTR1A-ARMC4 ACTR1A chr10 102502600 - ARMC4 chr10 27812625 - Exonic hg38 PRAD TCGA-G9-6361-01A 3 13 In-Frame Intra-chr q24.32 p12.1 Seq+ 98976 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP48-PSMA8 USP48 chr1 21751507 - PSMA8 chr18 26144559 + Exonic hg38 PRAD TCGA-G9-6361-01A 2 15 In-Frame Inter-chr p36.12 q11.2 Seq+ 98977 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC10A7-FKBP15 SLC10A7 chr4 146442783 - FKBP15 chr9 113170629 - Exonic hg38 PRAD TCGA-G9-6361-01A 3 6 In-Frame Inter-chr q31.22 q32 Seq+ 98978 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAP1GDS1-ASTN2 RAP1GDS1 chr4 98421394 + ASTN2 chr9 116651793 - Exonic hg38 PRAD TCGA-G9-6361-01A 3 5 Out-of-frame Inter-chr q23 q33.1 Seq+ 98979 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAI2-PPP2R1B RAI2 chrX 17860509 - PPP2R1B chr11 111755450 - Exonic hg38 PRAD TCGA-G9-6361-01A 2 7 3'UTR-CDS Inter-chr p22.13 q23.1 Tumor suppressor gene Seq+ 98980 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPALPP1-MEF2A GPALPP1 chr13 44989742 + MEF2A chr15 99671323 + Exonic hg38 PRAD TCGA-G9-6361-01A 2 5 Out-of-frame Inter-chr q14.12 q26.3 Transcription factor 98981 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAML3-LSG1 MAML3 chr4 140152860 - LSG1 chr3 194666572 - Exonic hg38 PRAD TCGA-G9-6361-01A 1 2 Out-of-frame Inter-chr q31.1 q29 98982 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK1-ABHD15 TAOK1 chr17 29502723 + ABHD15 chr17 29563086 - Exonic hg38 PRAD TCGA-G9-6363-01A 4 13 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 98983 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAP3-ATP8B2 DAP3 chr1 155689174 + ATP8B2 chr1 154344971 + Exonic hg38 PRAD TCGA-G9-6363-01A 1 5 5'UTR-CDS Intra-chr q22 q21.3 98984 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC35F5-WIPF1 SLC35F5 chr2 113750425 - WIPF1 chr2 174677124 - Exonic hg38 PRAD TCGA-G9-6364-01A 13 121 CDS-5'UTR Intra-chr q14.1 q31.1 Seq+ 98985 ChimerSeq TCGA FAWG TCGA_RNA-Seq WBP1L-PTEN WBP1L chr10 102798095 + PTEN chr10 87933013 + Exonic hg38 PRAD TCGA-G9-6364-01A 11 1 CDS-3'UTR Intra-chr q24.32 q23.31 Oncogene Tumor suppressor gene Seq+ 98986 ChimerSeq TCGA FAWG TCGA_RNA-Seq FYTTD1-IFIT1 FYTTD1 chr3 197750074 + IFIT1 chr10 89402281 + Exonic hg38 PRAD TCGA-G9-6364-01A 4 18 Out-of-frame Inter-chr q29 q23.31 Seq+ 98987 ChimerSeq TCGA FAWG TCGA_RNA-Seq GBF1-WBP1L GBF1 chr10 102344182 + WBP1L chr10 102809893 + Exonic hg38 PRAD TCGA-G9-6364-01A 3 9 In-Frame Intra-chr q24.32 q24.32 Seq+ 98988 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPNE4-MRPL3 CPNE4 chr3 132034567 - MRPL3 chr3 131500521 - Exonic hg38 PRAD TCGA-G9-6364-01A 1 4 5'UTR-CDS Intra-chr q22.1 q22.1 98989 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF3-FAM208A ARHGEF3 chr3 57035088 - FAM208A chr3 56663572 - Exonic hg38 PRAD TCGA-G9-6364-01A 1 3 Out-of-frame Intra-chr p14.3 p14.3 98990 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACPP-MYC ACPP chr3 132332344 + MYC chr8 127738248 + Exonic hg38 PRAD TCGA-G9-6366-01A 35 148 In-Frame Inter-chr q22.1 q24.21 Oncogene Transcription factor Seq+ 98991 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A21-FOXA1 SLC25A21 chr14 36874955 - FOXA1 chr14 37592710 - Exonic hg38 PRAD TCGA-G9-6366-01A 1000 1000 Out-of-frame Intra-chr q13.3 q21.1 Tumor suppressor gene Transcription factor 98992 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 41508081 - ETV4 chr17 43545367 - Exonic hg38 PRAD TCGA-G9-6371-01A 567 359 5'UTR-5'UTR Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 98993 ChimerSeq TCGA FAWG TCGA_RNA-Seq REXO2-NXPE1 REXO2 chr11 114439675 + NXPE1 chr11 114552880 - Exonic hg38 PRAD TCGA-G9-6371-01A 3 7 CDS-5'UTR Intra-chr q23.2 q23.2 Seq+ 98994 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYB561D1-CYMP CYB561D1 chr1 109494287 + CYMP chr1 110482775 + Exonic hg38 PRAD TCGA-G9-6373-01A 2 10 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 98995 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAPGEF2-C4orf45 RAPGEF2 chr4 159346998 + C4orf45 chr4 158893717 - Exonic hg38 PRAD TCGA-G9-6373-01A 2 6 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 98996 ChimerSeq TCGA FAWG TCGA_RNA-Seq UQCC1-MRPS35 UQCC1 chr20 35314688 - MRPS35 chr12 27735447 + Exonic hg38 PRAD TCGA-G9-6377-01A 5 14 In-Frame Inter-chr q11.22 p11.22 Seq+ 98997 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFKB1-LHFPL3 NFKB1 chr4 102525557 + LHFPL3 chr7 104906187 + Exonic hg38 PRAD TCGA-G9-6377-01A 3 5 Out-of-frame Inter-chr q24 Oncogene Tumor suppressor gene Transcription factor q22.2 Seq+ 98998 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLF15-SLC41A3 KLF15 chr3 126351841 - SLC41A3 chr3 126033678 - Exonic hg38 PRAD TCGA-G9-6377-01A 2 2 Out-of-frame Intra-chr q21.3 Transcription factor q21.3 98999 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIEZO1-TMEM219 PIEZO1 chr16 88719574 - TMEM219 chr16 29963110 + Exonic hg38 PRAD TCGA-G9-6377-01A 1 5 CDS-5'UTR Intra-chr q24.3 p11.2 99000 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGN2P46-AGAP1 HMGN2P46 chr15 45515892 + AGAP1 chr2 235750354 + Exonic hg38 PRAD TCGA-G9-6379-01A 2 4 5'UTR-CDS Inter-chr q21.1 q37.2 Seq+ 99001 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFF3-TMPRSS2 AFF3 chr2 100006632 - TMPRSS2 chr21 41498189 - Exonic hg38 PRAD TCGA-G9-6384-01A 2 15 Out-of-frame Inter-chr q11.2 Oncogene q22.3 99002 ChimerSeq TCGA FAWG TCGA_RNA-Seq HAUS6-MORC1 HAUS6 chr9 19102524 - MORC1 chr3 109007091 - Exonic hg38 PRAD TCGA-G9-6384-01A 1 2 Out-of-frame Inter-chr p22.1 q13.13 99003 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A39-EFCAB13 SLC25A39 chr17 44321058 - EFCAB13 chr17 47361378 + Exonic hg38 PRAD TCGA-G9-6494-01A 7 53 In-Frame Intra-chr q21.31 q21.32 Seq+ 99004 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDH3A2-PITPNM2 ALDH3A2 chr17 19665047 + PITPNM2 chr12 122992669 - Exonic hg38 PRAD TCGA-G9-6494-01A 4 18 In-Frame Inter-chr p11.2 q24.31 Seq+ 99005 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF5-MYO1D DCAF5 chr14 69091674 - MYO1D chr17 32780784 - Exonic hg38 PRAD TCGA-G9-6494-01A 1 11 Out-of-frame Inter-chr q24.1 q11.2 Seq+ 99006 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM120B-UBTF TMEM120B chr12 121712964 + UBTF chr17 44218296 - Exonic hg38 PRAD TCGA-G9-6494-01A 2 2 CDS-5'UTR Inter-chr q24.31 q21.31 Seq+ 99007 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIPK2-ARHGEF5 HIPK2 chr7 139626601 - ARHGEF5 chr7 144362658 + Exonic hg38 PRAD TCGA-G9-6496-01A 1 8 CDS-3'UTR Intra-chr q34 CMGC:DYRK Tumor suppressor gene q35 Seq+ 99008 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC1-ARL9 EXOC1 chr4 55860541 + ARL9 chr4 56523697 + Exonic hg38 PRAD TCGA-G9-6496-01A 1 6 In-Frame Intra-chr q12 q12 99009 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACPP-ZNF462 ACPP chr3 132317576 + ZNF462 chr9 106923354 + Exonic hg38 PRAD TCGA-G9-6498-01A 3 5 CDS-5'UTR Inter-chr q22.1 q31.2 Transcription factor Seq+ 99010 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPZL1-ILDR2 MPZL1 chr1 167776166 + ILDR2 chr1 166908104 - Exonic hg38 PRAD TCGA-G9-6499-01A 1 18 CDS-3'UTR Intra-chr q24.2 q24.1 99011 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1B-SPAG16 MYO1B chr2 191277030 + SPAG16 chr2 214410140 + Exonic hg38 PRAD TCGA-G9-6499-01A 2 11 Out-of-frame Intra-chr q32.3 q34 Seq+ 99012 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF12-LIG3 PHF12 chr17 28950065 - LIG3 chr17 34997738 + Exonic hg38 PRAD TCGA-G9-7509-01A 1 11 In-Frame Intra-chr q11.2 q12 Tumor suppressor gene Seq+ 99013 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDZRN3-FOXP1 PDZRN3 chr3 73602354 - FOXP1 chr3 71053773 - Exonic hg38 PRAD TCGA-G9-7509-01A 1 4 In-Frame Intra-chr p13 p13 Oncogene Tumor suppressor gene Transcription factor 99014 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTEL1-STMN3 RTEL1 chr20 63674093 + STMN3 chr20 63644309 - Exonic hg38 PRAD TCGA-G9-7510-01A 26 49 In-Frame Intra-chr q13.33 q13.33 Seq+ 99015 ChimerSeq TCGA FAWG TCGA_RNA-Seq VGLL3-RBMS3 VGLL3 chr3 86968590 - RBMS3 chr3 29587114 + Exonic hg38 PRAD TCGA-G9-7510-01A 8 30 In-Frame Intra-chr p12.1 p24.1 Tumor suppressor gene Seq+ 99016 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2AK3-32 EIF2AK3 chr2 88570874 - 32 chr2 89253842 - Exonic hg38 PRAD TCGA-G9-7510-01A 6 4 Out-of-frame Intra-chr p11.2 transporter 99017 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV3-MNDA ETV3 chr1 157134112 - MNDA chr1 158842134 + Exonic hg38 PRAD TCGA-G9-7510-01A 4 4 CDS-5'UTR Intra-chr q23.1 Transcription factor q23.1 Seq+ 99018 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL2-CPE KLHL2 chr4 165220059 + CPE chr4 165464390 + Exonic hg38 PRAD TCGA-G9-7510-01A 1 11 Out-of-frame Intra-chr q32.3 q32.3 Seq+ 99019 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0825-MCTP1 KIAA0825 chr5 94618500 - MCTP1 chr5 94714886 - Exonic hg38 PRAD TCGA-G9-7521-01A 3 10 5'UTR-CDS Intra-chr q15 q15 Seq+ 99020 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC41A2-ANAPC7 SLC41A2 chr12 104886293 - ANAPC7 chr12 110387892 - Exonic hg38 PRAD TCGA-G9-7521-01A 2 4 In-Frame Intra-chr q23.3 q24.11 Seq+ 99021 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205680394 - ERG chr21 38445621 - Exonic hg38 PRAD TCGA-G9-7522-01A 53 253 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 99022 ChimerSeq TCGA FAWG TCGA_RNA-Seq RERE-OOEP RERE chr1 8422727 - OOEP chr6 73369385 - Exonic hg38 PRAD TCGA-G9-7522-01A 5 95 Out-of-frame Inter-chr p36.23 q13 Seq+ 99023 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFHX3-ZMAT4 ZFHX3 chr16 72811577 - ZMAT4 chr8 40581261 - Exonic hg38 PRAD TCGA-G9-7522-01A 3 13 Out-of-frame Inter-chr q22.3 Tumor suppressor gene Transcription factor p11.21 Transcription factor Seq+ 99024 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX9-RASAL2 DHX9 chr1 182839456 + RASAL2 chr1 178390100 + Exonic hg38 PRAD TCGA-G9-7522-01A 1 7 5'UTR-CDS Intra-chr q25.3 q25.2 Tumor suppressor gene Seq+ 99025 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC8-PHKA1 HDAC8 chrX 72567889 - PHKA1 chrX 72584302 - Exonic hg38 PRAD TCGA-G9-7523-01A 3 11 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 99026 ChimerSeq TCGA FAWG TCGA_RNA-Seq YBX3-BORCS5 YBX3 chr12 10722850 - BORCS5 chr12 12435628 + Exonic hg38 PRAD TCGA-G9-7525-01A 1 12 CDS-3'UTR Intra-chr p13.2 Transcription factor 99027 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCK2-KDM4C NCK2 chr2 105745138 + KDM4C chr9 7165238 + Exonic hg38 PRAD TCGA-G9-7525-01A 2 6 5'UTR-5'UTR Inter-chr q12.2 p24.1 Seq+ 99028 ChimerSeq TCGA FAWG TCGA_RNA-Seq RORA-STARD9 RORA chr15 60592387 - STARD9 chr15 42716677 + Exonic hg38 PRAD TCGA-G9-7525-01A 1 3 Out-of-frame Intra-chr q22.2 Transcription factor q15.2 Seq+ 99029 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSU1-ZMYND11 RSU1 chr10 16782034 - ZMYND11 chr10 248336 + Exonic hg38 PRAD TCGA-G9-7525-01A 1 3 Out-of-frame Intra-chr p13 p15.3 Tumor suppressor gene 99030 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF6-MPZL1 DCAF6 chr1 168004793 + MPZL1 chr1 167765583 + Exonic hg38 PRAD TCGA-G9-A9S0-01A 3 16 In-Frame Intra-chr q24.2 q24.2 KB Seq+ 99031 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB11FIP4-ARHGAP23 RAB11FIP4 chr17 31525230 + ARHGAP23 chr17 38458102 + Exonic hg38 PRAD TCGA-G9-A9S0-01A 3 3 CDS-3'UTR Intra-chr q11.2 q12 Seq+ 99032 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP23-ZSCAN2 ARHGAP23 chr17 38460932 + ZSCAN2 chr15 84616309 + Exonic hg38 PRAD TCGA-G9-A9S0-01A 2 6 3'UTR-CDS Inter-chr q12 q25.2 Transcription factor Seq+ 99033 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZCCHC8-DIABLO ZCCHC8 chr12 122498827 - DIABLO chr12 122218397 - Exonic hg38 PRAD TCGA-G9-A9S0-01A 1 5 Out-of-frame Intra-chr q24.31 q24.31 Tumor suppressor gene 99034 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUFU-KCNH2 SUFU chr10 102550106 + KCNH2 chr7 150974941 - Exonic hg38 PRAD TCGA-G9-A9S4-01A 9 23 In-Frame Inter-chr q24.32 Oncogene Tumor suppressor gene q36.1 Seq+ 99035 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSTF3-THEM7P CSTF3 chr11 33161299 - THEM7P chr11 32230361 - Exonic hg38 PRAD TCGA-G9-A9S4-01A 4 7 Out-of-frame Intra-chr p13 p13 99036 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFT122-PITPNB IFT122 chr3 129464781 + PITPNB chr22 27854939 - Exonic hg38 PRAD TCGA-G9-A9S4-01A 2 8 Out-of-frame Inter-chr q21.3 q12.1 Seq+ 99037 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMTC3-CPNE4 TMTC3 chr12 88176319 + CPNE4 chr3 132040321 - Exonic hg38 PRAD TCGA-G9-A9S4-01A 1 12 5'UTR-5'UTR Inter-chr q21.32 q22.1 Seq+ 99038 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIS3L2-DNM1 DIS3L2 chr2 232263440 + DNM1 chr9 128234021 + Exonic hg38 PRAD TCGA-G9-A9S7-01A 11 24 Out-of-frame Inter-chr q37.1 q34.11 Seq+ 99039 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH1-CA1 CDH1 chr16 68738411 + CA1 chr8 85333620 - Exonic hg38 PRAD TCGA-G9-A9S7-01A 6 30 Out-of-frame Inter-chr q22.1 Oncogene Tumor suppressor gene q21.2 Seq+ 99040 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-KLF4 TMPRSS2 chr21 41488394 - KLF4 chr9 107489338 - Exonic hg38 PRAD TCGA-G9-A9S7-01A 5 34 CDS-5'UTR Inter-chr q22.3 q31.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 99041 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4B-ASTN2 KDM4B chr19 4969230 + ASTN2 chr9 116620443 - Exonic hg38 PRAD TCGA-G9-A9S7-01A 9 11 5'UTR-CDS Inter-chr p13.3 q33.1 Seq+ 99042 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHDC4-MAF KLHDC4 chr16 87765792 - MAF chr16 79594553 - Exonic hg38 PRAD TCGA-G9-A9S7-01A 6 14 Out-of-frame Intra-chr q24.2 q23.2 Oncogene Transcription factor Seq+ 99043 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFRC-BLOC1S5 TFRC chr3 196077064 - BLOC1S5 chr6 8041268 - Exonic hg38 PRAD TCGA-G9-A9S7-01A 2 12 In-Frame Inter-chr q29 p24.3 Seq+ 99044 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFS4-BASP1 NDUFS4 chr5 53560760 + BASP1 chr5 17275208 + Exonic hg38 PRAD TCGA-G9-A9S7-01A 1 3 5'UTR-5'UTR Intra-chr q11.2 p15.1 Tumor suppressor gene 99045 ChimerSeq TCGA FAWG TCGA_RNA-Seq HBP1-ATXN7L1 HBP1 chr7 107169027 + ATXN7L1 chr7 105761463 - Exonic hg38 PRAD TCGA-H9-7775-01A 2 9 3'UTR-CDS Intra-chr Tumor suppressor gene Transcription factor q22.3 Seq+ 99046 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGN2P46-ST14 HMGN2P46 chr15 45513963 + ST14 chr11 130188114 + Exonic hg38 PRAD TCGA-H9-7775-01A 1 13 5'UTR-CDS Inter-chr q21.1 q24.3 99047 ChimerSeq TCGA FAWG TCGA_RNA-Seq FLNA-ACTG2 FLNA chrX 154367397 - ACTG2 chr2 73913485 + Exonic hg38 PRAD TCGA-H9-A6BX-01A 1 5 In-Frame Inter-chr q28 Tumor suppressor gene p13.1 99048 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP1-OS9 LRP1 chr12 57158638 + OS9 chr12 57720406 + Exonic hg38 PRAD TCGA-H9-A6BY-01A 72 383 In-Frame Intra-chr q13.3 q13.3 Seq+ 99049 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 41508081 - ETV4 chr17 43545367 - Exonic hg38 PRAD TCGA-HC-7077-01A 419 1317 5'UTR-5'UTR Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 99050 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF10-SPATA17 ZNF10 chr12 133131014 + SPATA17 chr1 217862774 + Exonic hg38 PRAD TCGA-HC-7077-01A 11 139 5'UTR-CDS Inter-chr q24.33 Transcription factor q41 Seq+ 99051 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD8-AP1S1 CHD8 chr14 21409851 - AP1S1 chr7 101160519 + Exonic hg38 PRAD TCGA-HC-7077-01A 13 78 CDS-3'UTR Inter-chr q11.2 q22.1 Seq+ 99052 ChimerSeq TCGA FAWG TCGA_RNA-Seq EP300-NXPE2 EP300 chr22 41150198 + NXPE2 chr11 114698045 + Exonic hg38 PRAD TCGA-HC-7077-01A 9 28 In-Frame Inter-chr q13.2 Oncogene q23.3 Seq+ 99053 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR2J2-DAD1 POLR2J2 chr7 102671552 - DAD1 chr14 22575233 - Exonic hg38 PRAD TCGA-HC-7077-01A 1 19 Out-of-frame Inter-chr q22.1 q11.2 Seq+ 99054 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLG5-TMPRSS2 DLG5 chr10 77833914 - TMPRSS2 chr21 41470743 - Exonic hg38 PRAD TCGA-HC-7077-01A 1 15 5'UTR-CDS Inter-chr q22.3 q22.3 99055 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRBP1-VDAC3 RRBP1 chr20 17629823 - VDAC3 chr8 42399651 + Exonic hg38 PRAD TCGA-HC-7077-01A 2 9 Out-of-frame Inter-chr p12.1 p11.21 Seq+ 99056 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMIZ1-ZCCHC24 ZMIZ1 chr10 79216274 + ZCCHC24 chr10 79432758 - Exonic hg38 PRAD TCGA-HC-7077-01A 1 9 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 99057 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN23-ICA1L PTPN23 chr3 47381180 + ICA1L chr2 202796964 - Exonic hg38 PRAD TCGA-HC-7078-01A 8 21 Out-of-frame Inter-chr p21.31 Tumor suppressor gene q33.2 Seq+ 99058 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTPS1-HIVEP3 CTPS1 chr1 40979829 + HIVEP3 chr1 41918524 - Exonic hg38 PRAD TCGA-HC-7078-01A 2 3 5'UTR-3'UTR Intra-chr p34.2 p34.2 Tumor suppressor gene Transcription factor Seq+ 99059 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 41498119 - ETV4 chr17 43545668 - Exonic hg38 PRAD TCGA-HC-7079-01A 1 8 CDS-5'UTR Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 99060 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCMTD2-MACROD2 PCMTD2 chr20 64260272 + MACROD2 chr20 15229940 + Exonic hg38 PRAD TCGA-HC-7080-01A 5 15 3'UTR-CDS Intra-chr p12.1 Seq+ 99061 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGPAT5-PRSS55 AGPAT5 chr8 6708887 + PRSS55 chr8 10529507 + Exonic hg38 PRAD TCGA-HC-7080-01A 3 15 3'UTR-5'UTR Intra-chr p23.1 p23.1 Seq+ 99062 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLSTN1-IFFO2 CLSTN1 chr1 9823643 - IFFO2 chr1 18921121 - Exonic hg38 PRAD TCGA-HC-7080-01A 2 4 Out-of-frame Intra-chr p36.22 p36.13 Seq+ 99063 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF827-ABCE1 ZNF827 chr4 145938365 - ABCE1 chr4 145104386 + Exonic hg38 PRAD TCGA-HC-7080-01A 2 3 CDS-5'UTR Intra-chr q31.22 Transcription factor q31.21 99064 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSRA-AGPAT5 MSRA chr8 10319989 + AGPAT5 chr8 6755051 + Exonic hg38 PRAD TCGA-HC-7080-01A 1 3 5'UTR-3'UTR Intra-chr p23.1 p23.1 Seq+ 99065 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRIQ1-UHRF1BP1L LRRIQ1 chr12 85047470 + UHRF1BP1L chr12 100072813 - Exonic hg38 PRAD TCGA-HC-7080-01A 1 1 In-Frame Intra-chr q21.31 q23.1 99066 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRWD1-RAPGEF4 BRWD1 chr21 39298432 - RAPGEF4 chr2 173048600 + Exonic hg38 PRAD TCGA-HC-7081-01A 31 60 Out-of-frame Inter-chr q22.2 q31.1 Seq+ 99067 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKRA-SEC31A PRKRA chr2 178450966 - SEC31A chr4 82881940 - Exonic hg38 PRAD TCGA-HC-7081-01A 4 22 5'UTR-5'UTR Inter-chr q31.2 q21.22 Seq+ 99068 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF292-PTPRO ZNF292 chr6 87155759 + PTPRO chr12 15499442 + Exonic hg38 PRAD TCGA-HC-7081-01A 2 9 Out-of-frame Inter-chr q14.3 Tumor suppressor gene Transcription factor p12.3 Seq+ 99069 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF144B-PPP3CA RNF144B chr6 18399699 + PPP3CA chr4 101196116 - Exonic hg38 PRAD TCGA-HC-7209-01A 222 751 Out-of-frame Inter-chr p22.3 q24 Seq+ 99070 ChimerSeq TCGA FAWG TCGA_RNA-Seq STX3-MS4A15 STX3 chr11 59755635 + MS4A15 chr11 60767567 + Exonic hg38 PRAD TCGA-HC-7209-01A 20 136 CDS-5'UTR Intra-chr q12.1 q12.2 Seq+ 99071 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNMA1-FARP1 KCNMA1 chr10 77637265 - FARP1 chr13 98213220 + Exonic hg38 PRAD TCGA-HC-7209-01A 15 61 CDS-5'UTR Inter-chr q22.3 q32.2 Seq+ 99072 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPLD1-BANK1 GPLD1 chr6 24486075 - BANK1 chr4 101855035 + Exonic hg38 PRAD TCGA-HC-7209-01A 6 53 Out-of-frame Inter-chr p22.3 q24 Seq+ 99073 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFAT5-TCF7L2 NFAT5 chr16 69566374 + TCF7L2 chr10 113141184 + Exonic hg38 PRAD TCGA-HC-7209-01A 12 19 Out-of-frame Inter-chr q22.1 Transcription factor q25.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 99074 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFTUD2-DUSP3 EFTUD2 chr17 44883649 - DUSP3 chr17 43769814 - Exonic hg38 PRAD TCGA-HC-7209-01A 5 15 Out-of-frame Intra-chr q21.31 q21.31 Seq+ 99075 ChimerSeq TCGA FAWG TCGA_RNA-Seq AARSD1-CCR7 AARSD1 chr17 42961192 - CCR7 chr17 40558942 - Exonic hg38 PRAD TCGA-HC-7209-01A 2 26 In-Frame Intra-chr q21.31 q21.2 Seq+ 99076 ChimerSeq TCGA FAWG TCGA_RNA-Seq CECR2-C22orf31 CECR2 chr22 17369909 + C22orf31 chr22 29060843 - Exonic hg38 PRAD TCGA-HC-7209-01A 1 4 In-Frame Intra-chr q11.1 q12.1 99077 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMPR1A-FGFBP3 BMPR1A chr10 86756919 + FGFBP3 chr10 91909478 - Exonic hg38 PRAD TCGA-HC-7209-01A 1000 1000 5'UTR-5'UTR Intra-chr q23.2 TKL:STKR Oncogene Tumor suppressor gene q23.32 99078 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP6-OOEP SENP6 chr6 75634811 + OOEP chr6 73369385 - Exonic hg38 PRAD TCGA-HC-7210-01A 12 137 Out-of-frame Intra-chr q14.1 q13 Seq+ 99079 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUSC3-LOXL2 TUSC3 chr8 15743612 + LOXL2 chr8 23368434 - Exonic hg38 PRAD TCGA-HC-7210-01A 8 25 CDS-5'UTR Intra-chr p22 p21.3 Seq+ 99080 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACPP-NEDD4L ACPP chr3 132337554 + NEDD4L chr18 58165788 + Exonic hg38 PRAD TCGA-HC-7210-01A 1 8 In-Frame Inter-chr q22.1 q21.31 Tumor suppressor gene 99081 ChimerSeq TCGA FAWG TCGA_RNA-Seq DARS-THSD7B DARS chr2 135932783 - THSD7B chr2 137405613 + Exonic hg38 PRAD TCGA-HC-7210-01A 1 4 Out-of-frame Intra-chr q21.3 q22.1 Seq+ 99082 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A3-EPB41L4B SLC45A3 chr1 205659489 - EPB41L4B chr9 109279921 - Exonic hg38 PRAD TCGA-HC-7211-01A 27 188 In-Frame Inter-chr q32.1 q31.3 Seq+ 99083 ChimerSeq TCGA FAWG TCGA_RNA-Seq C19orf48-ZBTB25 C19orf48 chr19 50803629 - ZBTB25 chr14 64504946 - Exonic hg38 PRAD TCGA-HC-7211-01A 36 82 Out-of-frame Inter-chr q13.33 q23.3 Transcription factor 99084 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB20-CLDN11 ZBTB20 chr3 114350274 - CLDN11 chr3 170423163 + Exonic hg38 PRAD TCGA-HC-7211-01A 2 8 In-Frame Intra-chr q13.31 Transcription factor q26.2 Seq+ 99085 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPCN2-ZBTB1 TPCN2 chr11 69087206 + ZBTB1 chr14 64521487 + Exonic hg38 PRAD TCGA-HC-7211-01A 2 4 CDS-5'UTR Inter-chr q13.3 q23.3 Transcription factor 99086 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASA2-ACPP RASA2 chr3 141610066 + ACPP chr3 132344927 + Exonic hg38 PRAD TCGA-HC-7211-01A 1 7 Out-of-frame Intra-chr q23 q22.1 99087 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAP1GDS1-SCD5 RAP1GDS1 chr4 98404602 + SCD5 chr4 82636823 - Exonic hg38 PRAD TCGA-HC-7212-01A 5 7 Out-of-frame Intra-chr q23 q21.22 Seq+ 99088 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCD5-STAP1 SCD5 chr4 82636591 - STAP1 chr4 67606296 + Exonic hg38 PRAD TCGA-HC-7212-01A 2 10 In-Frame Intra-chr q21.22 q13.2 Seq+ 99089 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHSA1-TMEM67 AHSA1 chr14 77464686 + TMEM67 chr8 93758483 + Exonic hg38 PRAD TCGA-HC-7212-01A 1 4 In-Frame Inter-chr q24.3 q22.1 99090 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC27-MYL4 CDC27 chr17 47189146 - MYL4 chr17 47209389 + Exonic hg38 PRAD TCGA-HC-7213-01A 10 220 5'UTR-5'UTR Intra-chr q21.32 q21.32 Seq+ 99091 ChimerSeq TCGA FAWG TCGA_RNA-Seq JMJD1C-LIPF JMJD1C chr10 63521738 - LIPF chr10 88667287 + Exonic hg38 PRAD TCGA-HC-7213-01A 13 95 5'UTR-5'UTR Intra-chr q21.3 q23.31 99092 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELAC2-COX10 ELAC2 chr17 13015768 - COX10 chr17 14159877 + Exonic hg38 PRAD TCGA-HC-7213-01A 19 63 CDS-3'UTR Intra-chr p12 p12 Seq+ 99093 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A3-PHYKPL SLC45A3 chr1 205659489 - PHYKPL chr5 178211970 - Exonic hg38 PRAD TCGA-HC-7213-01A 3 73 Out-of-frame Inter-chr q32.1 q35.3 Seq+ 99094 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMCO4-ERRFI1 TMCO4 chr1 19755634 - ERRFI1 chr1 8015692 - Exonic hg38 PRAD TCGA-HC-7213-01A 1 2 CDS-5'UTR Intra-chr p36.13 p36.23 Tumor suppressor gene Seq+ 99095 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAA25-WSCD2 NAA25 chr12 112108716 - WSCD2 chr12 108226990 + Exonic hg38 PRAD TCGA-HC-7230-01A 9 18 Out-of-frame Intra-chr q24.13 q23.3 Seq+ 99096 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAB39L-USP12 CAB39L chr13 49331947 - USP12 chr13 27075388 - Exonic hg38 PRAD TCGA-HC-7230-01A 5 4 Out-of-frame Intra-chr q14.2 q12.13 Tumor suppressor gene Seq+ 99097 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERG-SON ERG chr21 38575662 - SON chr21 33546213 + Exonic hg38 PRAD TCGA-HC-7230-01A 3 11 Out-of-frame Intra-chr q22.2 Oncogene Transcription factor q22.11 Transcription factor Seq+ 99098 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMPR1A-ENTPD1 BMPR1A chr10 86900126 + ENTPD1 chr10 95844476 + Exonic hg38 PRAD TCGA-HC-7231-01A 2 49 In-Frame Intra-chr q23.2 TKL:STKR Oncogene Tumor suppressor gene q24.1 Seq+ 99099 ChimerSeq TCGA FAWG TCGA_RNA-Seq TET3-MNS1 TET3 chr2 74003166 + MNS1 chr15 56464247 - Exonic hg38 PRAD TCGA-HC-7231-01A 2 2 In-Frame Inter-chr p13.1 Transcription factor q21.3 99100 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX19-USP28 SNX19 chr11 130914266 - USP28 chr11 113805046 - Exonic hg38 PRAD TCGA-HC-7232-01A 24 131 In-Frame Intra-chr q25 q23.2 Seq+ 99101 ChimerSeq TCGA FAWG TCGA_RNA-Seq UTRN-MMADHC UTRN chr6 144523188 + MMADHC chr2 149587149 - Exonic hg38 PRAD TCGA-HC-7232-01A 5 41 CDS-5'UTR Inter-chr q24.2 q23.2 Seq+ 99102 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPHN-SLC8A3 GPHN chr14 67122377 + SLC8A3 chr14 70060939 - Exonic hg38 PRAD TCGA-HC-7232-01A 9 21 In-Frame Intra-chr q23.3 q24.2 Seq+ 99103 ChimerSeq TCGA FAWG TCGA_RNA-Seq REPS2-SMARCA1 REPS2 chrX 17029623 + SMARCA1 chrX 129481185 - Exonic hg38 PRAD TCGA-HC-7232-01A 4 7 In-Frame Intra-chr p22.2 q26.1 Seq+ 99104 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFE2L1-CARM1 NFE2L1 chr17 48057502 + CARM1 chr19 10912184 + Exonic hg38 PRAD TCGA-HC-7232-01A 3 10 In-Frame Inter-chr q21.32 Transcription factor p13.2 Seq+ 99105 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEFF2-UBE2E3 TMEFF2 chr2 192179668 - UBE2E3 chr2 181057693 + Exonic hg38 PRAD TCGA-HC-7232-01A 2 14 Out-of-frame Intra-chr q32.3 Tumor suppressor gene q31.3 Seq+ 99106 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFHX3-ALS2CR11 ZFHX3 chr16 72950469 - ALS2CR11 chr2 201575326 - Exonic hg38 PRAD TCGA-HC-7232-01A 2 14 Out-of-frame Inter-chr q22.3 Tumor suppressor gene Transcription factor Seq+ 99107 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCHP-IFT81 TCHP chr12 109908937 + IFT81 chr12 110203864 + Exonic hg38 PRAD TCGA-HC-7232-01A 2 13 In-Frame Intra-chr q24.11 Tumor suppressor gene q24.11 99108 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACPP-SAFB2 ACPP chr3 132317576 + SAFB2 chr19 5616335 - Exonic hg38 PRAD TCGA-HC-7233-01A 151 508 In-Frame Inter-chr q22.1 p13.3 Tumor suppressor gene Transcription factor Seq+ 99109 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXNDC16-ARG2 TXNDC16 chr14 52542371 - ARG2 chr14 67642186 + Exonic hg38 PRAD TCGA-HC-7233-01A 8 32 CDS-5'UTR Intra-chr q22.1 q24.1 Seq+ 99110 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD5-MCM7 SETD5 chr3 9397977 + MCM7 chr7 100098715 - Exonic hg38 PRAD TCGA-HC-7233-01A 2 12 5'UTR-CDS Inter-chr p25.3 q22.1 Seq+ 99111 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIPOL1-SKIL MIPOL1 chr14 37422949 + SKIL chr3 170359699 + Exonic hg38 PRAD TCGA-HC-7233-01A 1 12 CDS-5'UTR Inter-chr q13.3 q26.2 Tumor suppressor gene Transcription factor 99112 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM216-PGM3 TMEM216 chr11 61393976 + PGM3 chr6 83188798 - Exonic hg38 PRAD TCGA-HC-7233-01A 1 9 Out-of-frame Inter-chr q12.2 q14.1 99113 ChimerSeq TCGA FAWG TCGA_RNA-Seq EBPL-MIPEP EBPL chr13 49691254 - MIPEP chr13 23760217 - Exonic hg38 PRAD TCGA-HC-7233-01A 1 8 In-Frame Intra-chr q14.2 q12.12 Seq+ 99114 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSC22D2-SDCCAG8 TSC22D2 chr3 150411308 + SDCCAG8 chr1 243330540 + Exonic hg38 PRAD TCGA-HC-7233-01A 1 8 CDS-3'UTR Inter-chr q25.1 Seq+ 99115 ChimerSeq TCGA FAWG TCGA_RNA-Seq RERE-USP5 RERE chr1 8703055 - USP5 chr12 6863186 + Exonic hg38 PRAD TCGA-HC-7233-01A 2 3 5'UTR-CDS Inter-chr p36.23 p13.31 99116 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRBP1-MACROD2 RRBP1 chr20 17682028 - MACROD2 chr20 15862745 + Exonic hg38 PRAD TCGA-HC-7736-01A 12 247 5'UTR-5'UTR Intra-chr p12.1 p12.1 Seq+ 99117 ChimerSeq TCGA FAWG TCGA_RNA-Seq LINC-FGF14 LINC chr7 130945720 - FGF14 chr13 101875296 - Exonic hg38 PRAD TCGA-HC-7736-01A 10 32 Out-of-frame Inter-chr q33.1 99118 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCCA-COPG2 PCCA chr13 100368574 + COPG2 chr7 130564393 - Exonic hg38 PRAD TCGA-HC-7736-01A 3 11 Out-of-frame Inter-chr q32.3 q32.2 99119 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPNE4-ABCC5 CPNE4 chr3 132034567 - ABCC5 chr3 183982624 - Exonic hg38 PRAD TCGA-HC-7736-01A 1 13 5'UTR-5'UTR Intra-chr q22.1 q27.1 99120 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN1-GLDN ATXN1 chr6 16753233 - GLDN chr15 51377449 + Exonic hg38 PRAD TCGA-HC-7736-01A 1 6 5'UTR-5'UTR Inter-chr p22.3 q21.2 99121 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENOX2-SMARCA1 ENOX2 chrX 130703120 - SMARCA1 chrX 129471326 - Exonic hg38 PRAD TCGA-HC-7736-01A 1 5 Out-of-frame Intra-chr q26.1 q26.1 Seq+ 99122 ChimerSeq TCGA FAWG TCGA_RNA-Seq LEPROT-SGIP1 LEPROT chr1 65420740 + SGIP1 chr1 66719294 + Exonic hg38 PRAD TCGA-HC-7737-01A 5 5 In-Frame Intra-chr p31.3 p31.3 Seq+ 99123 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP1AR-NDST4 AP1AR chr4 112232174 + NDST4 chr4 114870950 - Exonic hg38 PRAD TCGA-HC-7738-01A 7 32 Out-of-frame Intra-chr q25 q26 Tumor suppressor gene Seq+ 99124 ChimerSeq TCGA FAWG TCGA_RNA-Seq COLEC12-ORM1 COLEC12 chr18 346771 - ORM1 chr9 114323659 + Exonic hg38 PRAD TCGA-HC-7740-01A 23 1 Out-of-frame Inter-chr p11.32 q32 Seq+ 99125 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM97-BLMH TMEM97 chr17 28319365 + BLMH chr17 30274197 - Exonic hg38 PRAD TCGA-HC-7742-01A 9 27 In-Frame Intra-chr q11.2 q11.2 Seq+ 99126 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDYL2-VEPH1 CDYL2 chr16 80804150 - VEPH1 chr3 157364512 - Exonic hg38 PRAD TCGA-HC-7744-01A 28 93 Out-of-frame Inter-chr q23.2 q25.32 Seq+ 99127 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC21B-SLC38A11 TTC21B chr2 165953685 - SLC38A11 chr2 164945727 - Exonic hg38 PRAD TCGA-HC-7744-01A 6 73 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 99128 ChimerSeq TCGA FAWG TCGA_RNA-Seq MINPP1-LIPJ MINPP1 chr10 87521169 + LIPJ chr10 88605633 + Exonic hg38 PRAD TCGA-HC-7744-01A 9 15 Out-of-frame Intra-chr q23.2 q23.31 Seq+ 99129 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF395-SLC25A44 ZNF395 chr8 28386004 - SLC25A44 chr1 156207886 + Exonic hg38 PRAD TCGA-HC-7744-01A 6 20 5'UTR-5'UTR Inter-chr p21.1 Transcription factor q22 Seq+ 99130 ChimerSeq TCGA FAWG TCGA_RNA-Seq AAK1-KCMF1 AAK1 chr2 69642878 - KCMF1 chr2 85027889 + Exonic hg38 PRAD TCGA-HC-7744-01A 4 20 In-Frame Intra-chr p13.3 Other:NAK p11.2 Transcription factor Seq+ 99131 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF618-PARP4 ZNF618 chr9 113876413 + PARP4 chr13 24453654 - Exonic hg38 PRAD TCGA-HC-7744-01A 1 20 Out-of-frame Inter-chr q32 Transcription factor q12.12 Seq+ 99132 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRCC-NUGGC PRCC chr1 156768239 + NUGGC chr8 28056054 - Exonic hg38 PRAD TCGA-HC-7744-01A 4 1 In-Frame Inter-chr q23.1 p21.1 99133 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDHA-PLA2G2A LDHA chr11 18403811 + PLA2G2A chr1 19978879 - Exonic hg38 PRAD TCGA-HC-7744-01A 1 1 5'UTR-5'UTR Inter-chr p15.1 p36.13 Tumor suppressor gene 99134 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRHL2-ANKRD46 GRHL2 chr8 101664518 + ANKRD46 chr8 100533311 - Exonic hg38 PRAD TCGA-HC-7745-01A 2 2 CDS-5'UTR Intra-chr q22.3 Transcription factor q22.3 99135 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERG-TMPRSS2 ERG chr21 38575662 - TMPRSS2 chr21 41489593 - Exonic hg38 PRAD TCGA-HC-7747-01A 2 7 Out-of-frame Intra-chr q22.2 Oncogene Transcription factor q22.3 Seq+ 99136 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205680394 - ERG chr21 38445621 - Exonic hg38 PRAD TCGA-HC-7748-01A 89 592 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 99137 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTBP2-METTL10 CTBP2 chr10 125038997 - METTL10 chr10 124774782 - Exonic hg38 PRAD TCGA-HC-7748-01A 13 70 Out-of-frame Intra-chr q26.13 Seq+ 99138 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOR1A-COG4 TOR1A chr9 129814083 - COG4 chr16 70490392 - Exonic hg38 PRAD TCGA-HC-7748-01A 5 21 Out-of-frame Inter-chr q34.11 q22.1 Seq+ 99139 ChimerSeq TCGA FAWG TCGA_RNA-Seq SORBS2-ARHGAP27 SORBS2 chr4 185956196 - ARHGAP27 chr17 45398047 - Exonic hg38 PRAD TCGA-HC-7748-01A 3 18 5'UTR-5'UTR Inter-chr q35.1 Seq+ 99140 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK7-SLC45A3 DOCK7 chr1 62552732 - SLC45A3 chr1 205664886 - Exonic hg38 PRAD TCGA-HC-7748-01A 1 5 CDS-5'UTR Intra-chr p31.3 q32.1 99141 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC120-ERAS CCDC120 chrX 49059095 + ERAS chrX 48829081 + Exonic hg38 PRAD TCGA-HC-7749-01A 7 52 5'UTR-5'UTR Intra-chr p11.23 p11.23 Seq+ 99142 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATMIN-GPR19 ATMIN chr16 81036206 + GPR19 chr12 12684507 - Exonic hg38 PRAD TCGA-HC-7749-01A 1 40 CDS-5'UTR Inter-chr q23.2 Tumor suppressor gene Transcription factor p13.1 Seq+ 99143 ChimerSeq TCGA FAWG TCGA_RNA-Seq BZW1-WDR12 BZW1 chr2 200815761 + WDR12 chr2 202907959 - Exonic hg38 PRAD TCGA-HC-7749-01A 1 24 Out-of-frame Intra-chr q33.1 q33.2 99144 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED26-C19orf44 MED26 chr19 16627872 - C19orf44 chr19 16520094 + Exonic hg38 PRAD TCGA-HC-7749-01A 1 12 CDS-3'UTR Intra-chr p13.11 p13.11 99145 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITCH-PIGU ITCH chr20 34440344 + PIGU chr20 34560979 - Exonic hg38 PRAD TCGA-HC-7752-01A 5 23 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 99146 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGU-MAP1LC3A PIGU chr20 34575104 - MAP1LC3A chr20 34559347 + Exonic hg38 PRAD TCGA-HC-7752-01A 1 6 In-Frame Intra-chr q11.22 q11.22 Seq+ 99147 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205680394 - ERG chr21 38445621 - Exonic hg38 PRAD TCGA-HC-7752-01A 1 3 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 99148 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB4A-WDR47 RAB4A chr1 229288843 + WDR47 chr1 108991329 - Exonic hg38 PRAD TCGA-HC-7817-01B 9 27 In-Frame Intra-chr q42.13 p13.3 Seq+ 99149 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4K3-TMEM178A MAP4K3 chr2 39436892 - TMEM178A chr2 39665087 + Exonic hg38 PRAD TCGA-HC-7817-01B 3 20 CDS-5'UTR Intra-chr p22.1 p22.1 Seq+ 99150 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR3B-PDS5B POLR3B chr12 106357951 + PDS5B chr13 32741080 + Exonic hg38 PRAD TCGA-HC-7817-01B 1 7 In-Frame Inter-chr q23.3 q13.1 Tumor suppressor gene Seq+ 99151 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACYP2-CFAP36 ACYP2 chr2 54057360 + CFAP36 chr2 55522102 + Exonic hg38 PRAD TCGA-HC-7817-01B 1 4 In-Frame Intra-chr p16.2 p16.1 99152 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF329-EPN1 ZNF329 chr19 58142557 - EPN1 chr19 55678527 + Exonic hg38 PRAD TCGA-HC-7818-01A 3 54 5'UTR-5'UTR Intra-chr q13.43 Transcription factor q13.42 Seq+ 99153 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGO2-DOCK5 AGO2 chr8 140532021 - DOCK5 chr8 25415525 + Exonic hg38 PRAD TCGA-HC-7818-01A 4 46 Out-of-frame Intra-chr q24.3 p21.2 Seq+ 99154 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMYND11-LYZL1 ZMYND11 chr10 135559 + LYZL1 chr10 29310110 + Exonic hg38 PRAD TCGA-HC-7818-01A 10 14 5'UTR-CDS Intra-chr p15.3 Tumor suppressor gene p12.1 Seq+ 99155 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMYND8-EPPIN ZMYND8 chr20 47276314 - EPPIN chr20 45542867 - Exonic hg38 PRAD TCGA-HC-7818-01A 1 10 In-Frame Intra-chr q13.12 q13.12 99156 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMYND8-WFDC6 ZMYND8 chr20 47276314 - WFDC6 chr20 45542867 - Exonic hg38 PRAD TCGA-HC-7818-01A 1 9 CDS-5'UTR Intra-chr q13.12 q13.12 99157 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBX3-RRM1 TBX3 chr12 114680879 - RRM1 chr11 4106046 + Exonic hg38 PRAD TCGA-HC-7818-01A 1 8 CDS-5'UTR Inter-chr q24.21 Transcription factor p15.4 Oncogene 99158 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMTM4-KLHL24 CMTM4 chr16 66622062 - KLHL24 chr3 183643480 + Exonic hg38 PRAD TCGA-HC-7818-01A 2 2 CDS-5'UTR Inter-chr q22.1 q27.1 Seq+ 99159 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP3S1-ARL14EPL AP3S1 chr5 115842106 + ARL14EPL chr5 116054014 + Exonic hg38 PRAD TCGA-HC-7818-01A 1 5 In-Frame Intra-chr q22.3 q23.1 99160 ChimerSeq TCGA FAWG TCGA_RNA-Seq HECTD4-ANAPC5 HECTD4 chr12 112381952 - ANAPC5 chr12 121337392 - Exonic hg38 PRAD TCGA-HC-7818-01A 1 3 In-Frame Intra-chr q24.13 q24.31 99161 ChimerSeq TCGA FAWG TCGA_RNA-Seq ULK2-B9D1 ULK2 chr17 19864803 - B9D1 chr17 19347880 - Exonic hg38 PRAD TCGA-HC-7819-01A 1 9 In-Frame Intra-chr p11.2 Other:ULK p11.2 99162 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205680394 - ERG chr21 38445621 - Exonic hg38 PRAD TCGA-HC-7820-01A 47 257 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 99163 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPD-C4orf22 HNRNPD chr4 82371528 - C4orf22 chr4 80944810 + Exonic hg38 PRAD TCGA-HC-7820-01A 1 19 Out-of-frame Intra-chr q21.22 q21.21 Seq+ 99164 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205680394 - ERG chr21 38445621 - Exonic hg38 PRAD TCGA-HC-7821-01A 42 176 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 99165 ChimerSeq TCGA FAWG TCGA_RNA-Seq RABGAP1-NIPSNAP3B RABGAP1 chr9 122998766 + NIPSNAP3B chr9 104772822 + Exonic hg38 PRAD TCGA-HC-7821-01A 12 95 Out-of-frame Intra-chr q33.2 q31.1 Seq+ 99166 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGAPA2-RSRP1 RALGAPA2 chr20 20472756 - RSRP1 chr1 25247029 - Exonic hg38 PRAD TCGA-HC-7821-01A 13 30 CDS-5'UTR Inter-chr p11.23 p36.11 99167 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHEB-PINT RHEB chr7 151484737 - PINT chr7 131108803 - Exonic hg38 PRAD TCGA-HC-7821-01A 5 17 Out-of-frame Intra-chr q36.1 Oncogene Tumor suppressor gene 99168 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE4D-PLPP1 PDE4D chr5 59180595 - PLPP1 chr5 55441908 - Exonic hg38 PRAD TCGA-HC-7821-01A 2 21 Out-of-frame Intra-chr q12.1 q11.2 99169 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKLN1-AMTN MKLN1 chr7 131202974 + AMTN chr4 70528723 + Exonic hg38 PRAD TCGA-HC-7821-01A 2 15 5'UTR-CDS Inter-chr q32.3 q13.3 Seq+ 99170 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIRLET7BHG-DMC1 MIRLET7BHG chr22 46053920 + DMC1 chr22 38568289 - Exonic hg38 PRAD TCGA-HC-7821-01A 1 12 5'UTR-5'UTR Intra-chr q13.31 q13.1 99171 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1A-SEC11A ARID1A chr1 26767999 + SEC11A chr15 84691644 - Exonic hg38 PRAD TCGA-HC-7821-01A 1 9 In-Frame Inter-chr p36.11 Oncogene Tumor suppressor gene q25.3 Seq+ 99172 ChimerSeq TCGA FAWG TCGA_RNA-Seq C5-BRINP1 C5 chr9 121032113 - BRINP1 chr9 119168224 - Exonic hg38 PRAD TCGA-HC-7821-01A 1 9 Out-of-frame Intra-chr q33.2 q33.1 Tumor suppressor gene 99173 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEK1-CBR4 NEK1 chr4 169507037 - CBR4 chr4 168894765 - Exonic hg38 PRAD TCGA-HC-7821-01A 1 7 CDS-3'UTR Intra-chr q33 Other:NEK q32.3 99174 ChimerSeq TCGA FAWG TCGA_RNA-Seq AATK-FOXP1 AATK chr17 81119380 - FOXP1 chr3 71299880 - Exonic hg38 PRAD TCGA-HC-7821-01A 1 5 CDS-5'UTR Inter-chr q25.3 p13 Oncogene Tumor suppressor gene Transcription factor 99175 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A8-RHEB SLC39A8 chr4 102344444 - RHEB chr7 151477415 - Exonic hg38 PRAD TCGA-HC-7821-01A 2 1 In-Frame Inter-chr q24 q36.1 Oncogene 99176 ChimerSeq TCGA FAWG TCGA_RNA-Seq TDRD7-GNA14 TDRD7 chr9 97432238 + GNA14 chr9 77529253 - Exonic hg38 PRAD TCGA-HC-7821-01A 1 3 Out-of-frame Intra-chr q22.33 q21.2 Seq+ 99177 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-TMEM109 TMPRSS2 chr21 41488394 - TMEM109 chr11 60919686 + Exonic hg38 PRAD TCGA-HC-8213-01A 1 20 CDS-5'UTR Inter-chr q22.3 q12.2 Seq+ 99178 ChimerSeq TCGA FAWG TCGA_RNA-Seq SORD-ADPGK SORD chr15 45023349 + ADPGK chr15 72785846 - Exonic hg38 PRAD TCGA-HC-8216-01A 5 18 5'UTR-5'UTR Intra-chr q21.1 q24.1 Seq+ 99179 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-TMEM109 TMPRSS2 chr21 41488394 - TMEM109 chr11 60919686 + Exonic hg38 PRAD TCGA-HC-8216-01A 4 11 CDS-5'UTR Inter-chr q22.3 q12.2 Seq+ 99180 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF18B-TUBG1 KIF18B chr17 44947628 - TUBG1 chr17 42612075 + Exonic hg38 PRAD TCGA-HC-8216-01A 3 13 5'UTR-CDS Intra-chr q21.31 q21.2 Seq+ 99181 ChimerSeq TCGA FAWG TCGA_RNA-Seq MITF-ARL6IP5 MITF chr3 69739701 + ARL6IP5 chr3 69101839 + Exonic hg38 PRAD TCGA-HC-8216-01A 3 7 In-Frame Intra-chr p13 Oncogene Transcription factor p14.1 Tumor suppressor gene Seq+ 99182 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL17RE-SLC3A2 IL17RE chr3 9909283 + SLC3A2 chr11 62882908 + Exonic hg38 PRAD TCGA-HC-8216-01A 4 1 In-Frame Inter-chr p25.3 q12.3 99183 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIPEP-C1QTNF9B MIPEP chr13 23756545 - C1QTNF9B chr13 23897226 - Exonic hg38 PRAD TCGA-HC-8216-01A 2 1 CDS-3'UTR Intra-chr q12.12 q12.12 99184 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF2-DEDD2 SMURF2 chr17 64661829 - DEDD2 chr19 42217045 - Exonic hg38 PRAD TCGA-HC-8216-01A 1 4 CDS-5'UTR Inter-chr q24.1 q13.2 Seq+ 99185 ChimerSeq TCGA FAWG TCGA_RNA-Seq JMJD1C-YWHAZ JMJD1C chr10 63200476 - YWHAZ chr8 100925039 - Exonic hg38 PRAD TCGA-HC-8216-01A 1 1 Out-of-frame Inter-chr q21.3 q22.3 Seq+ 99186 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAPD7-RAF1 PAPD7 chr5 6751197 + RAF1 chr3 12599808 - Exonic hg38 PRAD TCGA-HC-8256-01A 12 34 Out-of-frame Inter-chr p15.31 p25.2 TKL:RAF Oncogene Seq+ 99187 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAF1-PHC3 RAF1 chr3 12599691 - PHC3 chr3 170097384 - Exonic hg38 PRAD TCGA-HC-8256-01A 7 22 In-Frame Intra-chr p25.2 TKL:RAF Oncogene q26.2 Tumor suppressor gene Seq+ 99188 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC7-RRP15 LRRC7 chr1 69568641 + RRP15 chr1 218330948 + Exonic hg38 PRAD TCGA-HC-8257-01A 9 21 Out-of-frame Intra-chr p31.1 q41 Seq+ 99189 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNLRB1-CNBD2 DYNLRB1 chr20 34526343 + CNBD2 chr20 36008297 + Exonic hg38 PRAD TCGA-HC-8257-01A 3 15 In-Frame Intra-chr q11.22 q11.23 Seq+ 99190 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMPR2-MARCH4 BMPR2 chr2 202542447 + 2019_ 3_ 4_ chr2 216259679 - Exonic hg38 PRAD TCGA-HC-8258-01A 9 36 Out-of-frame Intra-chr q33.1 TKL:STKR Tumor suppressor gene q35 Seq+ 99191 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC30A7-CMTM8 SLC30A7 chr1 100896671 + CMTM8 chr3 32367872 + Exonic hg38 PRAD TCGA-HC-8259-01A 2 24 Out-of-frame Inter-chr p21.2 p22.3 Seq+ 99192 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETF1-TRAPPC13 ETF1 chr5 138542833 - TRAPPC13 chr5 65658368 + Exonic hg38 PRAD TCGA-HC-8259-01A 1 11 Out-of-frame Intra-chr q31.2 q12.3 99193 ChimerSeq TCGA FAWG TCGA_RNA-Seq YEATS2-LRCH3 YEATS2 chr3 183762279 + LRCH3 chr3 197883541 + Exonic hg38 PRAD TCGA-HC-8259-01A 1 2 In-Frame Intra-chr q27.1 q29 99194 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLPP1-CDC42SE2 PLPP1 chr5 55467869 - CDC42SE2 chr5 131359209 + Exonic hg38 PRAD TCGA-HC-8260-01A 33 97 CDS-5'UTR Intra-chr q11.2 q31.1 99195 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB4-SLC22A4 ZBTB4 chr17 7462419 - SLC22A4 chr5 132334718 + Exonic hg38 PRAD TCGA-HC-8260-01A 3 17 5'UTR-CDS Inter-chr Tumor suppressor gene Transcription factor q31.1 99196 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A3-CPNE4 SLC45A3 chr1 205661861 - CPNE4 chr3 132040321 - Exonic hg38 PRAD TCGA-HC-8260-01A 2 13 CDS-5'UTR Inter-chr q32.1 q22.1 99197 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATM-DDX10 ATM chr11 108354874 + DDX10 chr11 108838446 + Exonic hg38 PRAD TCGA-HC-8260-01A 2 12 In-Frame Intra-chr q22.3 Atypical:PIKK Oncogene Tumor suppressor gene q22.3 99198 ChimerSeq TCGA FAWG TCGA_RNA-Seq COG6-DNAJC15 COG6 chr13 39724561 + DNAJC15 chr13 43085768 + Exonic hg38 PRAD TCGA-HC-8260-01A 1 3 Out-of-frame Intra-chr q14.11 q14.11 Seq+ 99199 ChimerSeq TCGA FAWG TCGA_RNA-Seq H2AFV-UBASH3A H2AFV chr7 44847969 - UBASH3A chr21 42403916 + Exonic hg38 PRAD TCGA-HC-8260-01A 1 2 CDS-5'UTR Inter-chr p13 q22.3 99200 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTRR-SLC30A5 MTRR chr5 7878322 + SLC30A5 chr5 69117239 + Exonic hg38 PRAD TCGA-HC-8260-01A 1 2 In-Frame Intra-chr p15.31 Oncogene q13.1 Seq+ 99201 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPAT-SLN NPAT chr11 108222500 - SLN chr11 107712162 - Exonic hg38 PRAD TCGA-HC-8261-01A 3 108 CDS-5'UTR Intra-chr q22.3 q22.3 Seq+ 99202 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHOC2-TMEM178A SHOC2 chr10 110919657 + TMEM178A chr2 39704081 + Exonic hg38 PRAD TCGA-HC-8262-01A 93 22 5'UTR-5'UTR Inter-chr q25.2 p22.1 Seq+ 99203 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCT3-GON4L CCT3 chr1 156333547 - GON4L chr1 155832950 - Exonic hg38 PRAD TCGA-HC-8262-01A 6 32 3'UTR-CDS Intra-chr q22 q22 Seq+ 99204 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO6-NEGR1 MYO6 chr6 75848531 + NEGR1 chr1 71698139 - Exonic hg38 PRAD TCGA-HC-8262-01A 4 13 In-Frame Inter-chr q14.1 p31.1 Seq+ 99205 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHH2-VSNL1 PLEKHH2 chr2 43644796 + VSNL1 chr2 17567380 + Exonic hg38 PRAD TCGA-HC-8262-01A 1 10 CDS-5'UTR Intra-chr p21 p24.2 Tumor suppressor gene Seq+ 99206 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF821-CHD9 ZNF821 chr16 71879907 - CHD9 chr16 53235185 + Exonic hg38 PRAD TCGA-HC-8262-01A 1 6 Out-of-frame Intra-chr q22.2 Transcription factor q12.2 Seq+ 99207 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRRM1-NFYC SRRM1 chr1 24646073 + NFYC chr1 40738836 + Exonic hg38 PRAD TCGA-HC-8262-01A 1 4 5'UTR-5'UTR Intra-chr p36.11 p34.2 Transcription factor Seq+ 99208 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHGDH-NEGR1 PHGDH chr1 119737266 + NEGR1 chr1 71776297 - Exonic hg38 PRAD TCGA-HC-8262-01A 1 3 Out-of-frame Intra-chr p12 p31.1 99209 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFYC-SLC4A4 NFYC chr1 40691867 + SLC4A4 chr4 71236576 + Exonic hg38 PRAD TCGA-HC-8262-01A 1 1 5'UTR-5'UTR Inter-chr p34.2 Transcription factor q13.3 99210 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3B-NRDC RAB3B chr1 51933318 - NRDC chr1 51840514 - Exonic hg38 PRAD TCGA-HC-8262-01A 1000 1000 Out-of-frame Intra-chr p32.3 p32.3 99211 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD63-PKP2 CD63 chr12 55725570 - PKP2 chr12 32802556 - Exonic hg38 PRAD TCGA-HC-8264-01B 31 219 Out-of-frame Intra-chr q13.2 p11.21 Seq+ 99212 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKP2-SARNP PKP2 chr12 32802403 - SARNP chr12 55760640 - Exonic hg38 PRAD TCGA-HC-8264-01B 2 3 Out-of-frame Intra-chr p11.21 q13.2 Seq+ 99213 ChimerSeq TCGA FAWG TCGA_RNA-Seq SND1-LEP SND1 chr7 127707647 + LEP chr7 128251991 + Exonic hg38 PRAD TCGA-HC-8264-01B 1 4 CDS-5'UTR Intra-chr q32.1 q32.1 99214 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNE3-GSC SYNE3 chr14 95475678 - GSC chr14 94769217 - Exonic hg38 PRAD TCGA-HC-8264-01B 1 1 Out-of-frame Intra-chr q32.13 q32.13 Transcription factor 99215 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCC1-SPINK8 SMARCC1 chr3 47736034 - SPINK8 chr3 48309946 - Exonic hg38 PRAD TCGA-HC-8265-01A 64 376 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 99216 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAZ1B-POMZP3 BAZ1B chr7 73459536 - POMZP3 chr7 76611813 - Exonic hg38 PRAD TCGA-HC-8265-01A 15 30 CDS-5'UTR Intra-chr q11.23 Seq+ 99217 ChimerSeq TCGA FAWG TCGA_RNA-Seq GABRG3-SNHG14 GABRG3 chr15 27026821 + SNHG14 chr15 25338011 + Exonic hg38 PRAD TCGA-HC-8265-01A 7 40 CDS-5'UTR Intra-chr q12 q11.2 Seq+ 99218 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPEN-TNFRSF1B SPEN chr1 15916279 + TNFRSF1B chr1 12201967 + Exonic hg38 PRAD TCGA-HC-8265-01A 3 29 In-Frame Intra-chr p36.21 Transcription factor p36.22 Seq+ 99219 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-RASSF3 FRS2 chr12 69470530 + RASSF3 chr12 64684787 + Exonic hg38 PRAD TCGA-HC-8265-01A 2 14 5'UTR-5'UTR Intra-chr q15 q14.2 Tumor suppressor gene Seq+ 99220 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANBP3-MLLT1 RANBP3 chr19 5924827 - MLLT1 chr19 6270759 - Exonic hg38 PRAD TCGA-HC-8265-01A 2 14 In-Frame Intra-chr p13.3 p13.3 Seq+ 99221 ChimerSeq TCGA FAWG TCGA_RNA-Seq SS18-DOCK2 SS18 chr18 26032399 - DOCK2 chr5 169840757 + Exonic hg38 PRAD TCGA-HC-8265-01A 2 13 In-Frame Inter-chr q11.2 q35.1 Seq+ 99222 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK8IP3-TELO2 MAPK8IP3 chr16 1763006 + TELO2 chr16 1501663 + Exonic hg38 PRAD TCGA-HC-8265-01A 1 15 In-Frame Intra-chr p13.3 p13.3 Seq+ 99223 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELK4-SLC26A9 ELK4 chr1 205623676 - SLC26A9 chr1 205935838 - Exonic hg38 PRAD TCGA-HC-8265-01A 3 5 CDS-5'UTR Intra-chr q32.1 Transcription factor q32.1 Seq+ 99224 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRA-PSMF1 PTPRA chr20 2988474 + PSMF1 chr20 1135121 + Exonic hg38 PRAD TCGA-HC-8265-01A 2 5 Out-of-frame Intra-chr p13 p13 Seq+ 99225 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIP2A-COL6A2 DIP2A chr21 46541895 + COL6A2 chr21 46111450 + Exonic hg38 PRAD TCGA-HC-8265-01A 1 8 CDS-5'UTR Intra-chr q22.3 q22.3 99226 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC5-SLC35F4 EXOC5 chr14 57268622 - SLC35F4 chr14 57594124 - Exonic hg38 PRAD TCGA-HC-8265-01A 1 5 Out-of-frame Intra-chr q22.3 q23.1 Seq+ 99227 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATAD2B-KCNN3 GATAD2B chr1 153922733 - KCNN3 chr1 154772393 - Exonic hg38 PRAD TCGA-HC-8265-01A 1 3 5'UTR-CDS Intra-chr Transcription factor q21.3 Seq+ 99228 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITCH-DEFB123 ITCH chr20 34369470 + DEFB123 chr20 31450029 + Exonic hg38 PRAD TCGA-HC-8265-01A 1 3 5'UTR-CDS Intra-chr q11.22 q11.21 99229 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC58-FSTL1 LRRC58 chr3 120348744 - FSTL1 chr3 120416027 - Exonic hg38 PRAD TCGA-HC-8265-01A 1 1 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 99230 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAZ1B-ZP3 BAZ1B chr7 73459536 - ZP3 chr7 76440250 + Exonic hg38 PRAD TCGA-HC-8265-01A 1000 1000 In-Frame Intra-chr q11.23 q11.23 Seq+ 99231 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAK-INTS12 MAK chr6 10791675 - INTS12 chr4 105683317 - Exonic hg38 PRAD TCGA-HC-8266-01A 3 16 Out-of-frame Inter-chr p24.2 CMGC:RCK q24 Seq+ 99232 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM2B-SLC9A5 KDM2B chr12 121574547 - SLC9A5 chr16 67270738 + Exonic hg38 PRAD TCGA-HC-8266-01A 4 9 In-Frame Inter-chr q24.31 Transcription factor q22.1 Seq+ 99233 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP3CA-INTS12 PPP3CA chr4 101195916 - INTS12 chr4 105683317 - Exonic hg38 PRAD TCGA-HC-8266-01A 2 11 Out-of-frame Intra-chr q24 q24 Seq+ 99234 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP3CA-PPIL1 PPP3CA chr4 101346739 - PPIL1 chr6 36871872 - Exonic hg38 PRAD TCGA-HC-8266-01A 2 6 Out-of-frame Inter-chr q24 p21.2 Seq+ 99235 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP3CA-MAK PPP3CA chr4 101195916 - MAK chr6 10796309 - Exonic hg38 PRAD TCGA-HC-8266-01A 1 6 Out-of-frame Inter-chr q24 p24.2 CMGC:RCK 99236 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53-DHX33 TP53 chr17 7675121 - DHX33 chr17 5443834 - Exonic hg38 PRAD TCGA-HC-A48F-01A 27 85 Out-of-frame Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.2 Seq+ 99237 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRP1-PTEN NRP1 chr10 33330708 - PTEN chr10 87957853 + Exonic hg38 PRAD TCGA-HC-A48F-01A 1 30 3'UTR-3'UTR Intra-chr p11.22 q23.31 Oncogene Tumor suppressor gene Seq+ 99238 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLHC1-FAM98A CLHC1 chr2 55228032 - FAM98A chr2 33587320 - Exonic hg38 PRAD TCGA-HC-A48F-01A 3 9 5'UTR-5'UTR Intra-chr p16.1 p22.3 Seq+ 99239 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBXN6-STOX2 UBXN6 chr19 4452364 - STOX2 chr4 184001325 + Exonic hg38 PRAD TCGA-HC-A48F-01A 2 4 Out-of-frame Inter-chr p13.3 q35.1 99240 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIX-CAPN12 NFIX chr19 13081855 + CAPN12 chr19 38742528 - Exonic hg38 PRAD TCGA-HC-A4ZV-01A 43 277 CDS-5'UTR Intra-chr p13.13 Transcription factor q13.2 Seq+ 99241 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFHX3-PMFBP1 ZFHX3 chr16 73058530 - PMFBP1 chr16 72120089 - Exonic hg38 PRAD TCGA-HC-A4ZV-01A 2 11 5'UTR-CDS Intra-chr q22.3 Tumor suppressor gene Transcription factor q22.2 Seq+ 99242 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSK3B-LSAMP GSK3B chr3 119947268 - LSAMP chr3 116019640 - Exonic hg38 PRAD TCGA-HC-A4ZV-01A 2 7 Out-of-frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q13.31 Tumor suppressor gene Seq+ 99243 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC2-GPM6B TRAPPC2 chrX 13734525 - GPM6B chrX 13785808 - Exonic hg38 PRAD TCGA-HC-A4ZV-01A 1 6 5'UTR-CDS Intra-chr p22.2 p22.2 99244 ChimerSeq TCGA FAWG TCGA_RNA-Seq ODF2-COQ4 ODF2 chr9 128482887 + COQ4 chr9 128332850 + Exonic hg38 PRAD TCGA-HC-A4ZV-01A 1 1 Out-of-frame Intra-chr q34.11 q34.11 99245 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR34-PCA3 WDR34 chr9 128640691 - PCA3 chr9 76784283 + Exonic hg38 PRAD TCGA-HC-A631-01A 160 744 CDS-5'UTR Intra-chr q34.11 q21.2 Seq+ 99246 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDLBP-TMC1 HDLBP chr2 241247056 - TMC1 chr9 72830451 + Exonic hg38 PRAD TCGA-HC-A631-01A 61 643 Out-of-frame Inter-chr q37.3 q21.13 Seq+ 99247 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC32-HDLBP TTC32 chr2 19901476 - HDLBP chr2 241230944 - Exonic hg38 PRAD TCGA-HC-A631-01A 26 302 Out-of-frame Intra-chr p24.1 q37.3 Seq+ 99248 ChimerSeq TCGA FAWG TCGA_RNA-Seq CKB-CYB5R3 CKB chr14 103522301 - CYB5R3 chr22 42630988 - Exonic hg38 PRAD TCGA-HC-A631-01A 2 1 In-Frame Inter-chr q32.33 q13.2 99249 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX9-FBXO7 DHX9 chr1 182867043 + FBXO7 chr22 32478981 + Exonic hg38 PRAD TCGA-HC-A631-01A 1 4 5'UTR-5'UTR Inter-chr q25.3 q12.3 Seq+ 99250 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPEB3-PRIM1 CPEB3 chr10 92081320 - PRIM1 chr12 56747032 - Exonic hg38 PRAD TCGA-HC-A631-01A 1 3 In-Frame Inter-chr q23.32 q13.3 99251 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC22A23-CAMTA1 SLC22A23 chr6 3410188 - CAMTA1 chr1 6820181 + Exonic hg38 PRAD TCGA-HC-A632-01A 15 104 Out-of-frame Inter-chr p25.2 p36.31 Tumor suppressor gene Transcription factor Seq+ 99252 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM9SF4-ZNF423 TM9SF4 chr20 32136173 + ZNF423 chr16 49789546 - Exonic hg38 PRAD TCGA-HC-A632-01A 13 57 In-Frame Inter-chr q11.21 q12.1 Transcription factor Seq+ 99253 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP7-MAP3K5 MAP7 chr6 136356692 - MAP3K5 chr6 136639638 - Exonic hg38 PRAD TCGA-HC-A632-01A 5 30 In-Frame Intra-chr q23.3 q23.3 STE:STE11 Seq+ 99254 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS29-SVOP VPS29 chr12 110502049 - SVOP chr12 108912741 - Exonic hg38 PRAD TCGA-HC-A632-01A 6 24 In-Frame Intra-chr q24.11 q24.11 Seq+ 99255 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC10A7-EYS SLC10A7 chr4 146521618 - EYS chr6 65057727 - Exonic hg38 PRAD TCGA-HC-A632-01A 2 7 In-Frame Inter-chr q31.22 q12 Seq+ 99256 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC61-TFCP2 LRRC61 chr7 150326010 + TFCP2 chr12 51118772 - Exonic hg38 PRAD TCGA-HC-A632-01A 1 1 5'UTR-CDS Inter-chr q36.1 q13.13 Transcription factor 99257 ChimerSeq TCGA FAWG TCGA_RNA-Seq BANK1-AGMO BANK1 chr4 102043907 + AGMO chr7 15201359 - Exonic hg38 PRAD TCGA-HC-A6AL-01A 8 40 Out-of-frame Inter-chr q24 p21.2 Seq+ 99258 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205680394 - ERG chr21 38445621 - Exonic hg38 PRAD TCGA-HC-A6AN-01A 37 216 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 99259 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERCC6L2-IPPK ERCC6L2 chr9 95970656 + IPPK chr9 92635308 - Exonic hg38 PRAD TCGA-HC-A6AN-01A 3 3 Out-of-frame Intra-chr q22.32 q22.31 99260 ChimerSeq TCGA FAWG TCGA_RNA-Seq LARP4B-WASHC2C LARP4B chr10 863743 - WASHC2C chr10 45784565 + Exonic hg38 PRAD TCGA-HC-A6AN-01A 2 4 Out-of-frame Intra-chr p15.3 q11.22 99261 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP22-ATP2A3 USP22 chr17 21042665 - ATP2A3 chr17 3945148 - Exonic hg38 PRAD TCGA-HC-A6AN-01A 2 2 In-Frame Intra-chr p11.2 p13.2 Seq+ 99262 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHCR24-ERCC6L2 DHCR24 chr1 54875942 - ERCC6L2 chr9 95970576 + Exonic hg38 PRAD TCGA-HC-A6AN-01A 1 5 Out-of-frame Inter-chr p32.3 q22.32 99263 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBD5-GRM7 MBD5 chr2 148021684 + GRM7 chr3 7146452 + Exonic hg38 PRAD TCGA-HC-A6AN-01A 1 3 5'UTR-CDS Inter-chr q23.1 p26.1 99264 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD1-SLCO6A1 CHD1 chr5 98892525 - SLCO6A1 chr5 102413143 - Exonic hg38 PRAD TCGA-HC-A6AP-01A 17 26 In-Frame Intra-chr q21.1 Tumor suppressor gene q21.1 Seq+ 99265 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLO1-KIF6 GLO1 chr6 38702971 - KIF6 chr6 39420003 - Exonic hg38 PRAD TCGA-HC-A6AP-01A 3 5 Out-of-frame Intra-chr p21.2 p21.2 Seq+ 99266 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHCHD6-MYLK CHCHD6 chr3 126704399 + MYLK chr3 123831670 - Exonic hg38 PRAD TCGA-HC-A6AP-01A 2 4 CDS-5'UTR Intra-chr q21.3 q21.1 Seq+ 99267 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC31A-ANAPC10 SEC31A chr4 82878730 - ANAPC10 chr4 144995603 - Exonic hg38 PRAD TCGA-HC-A6AP-01A 1 7 In-Frame Intra-chr q21.22 q31.21 Seq+ 99268 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205680394 - ETV1 chr7 13939246 - Exonic hg38 PRAD TCGA-HC-A6AQ-01A 11 33 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 99269 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERINC5-PLPP1 SERINC5 chr5 80255896 - PLPP1 chr5 55426039 - Exonic hg38 PRAD TCGA-HC-A6AS-01A 46 69 In-Frame Intra-chr q14.1 q11.2 99270 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN1-BCAS4 PTPN1 chr20 50510590 + BCAS4 chr20 50818211 + Exonic hg38 PRAD TCGA-HC-A6HY-01A 6 26 In-Frame Intra-chr q13.13 Tumor suppressor gene q13.13 Seq+ 99271 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP28-TMPRSS2 USP28 chr11 113804673 - TMPRSS2 chr21 41468538 - Exonic hg38 PRAD TCGA-HC-A6HY-01A 1 3 Out-of-frame Inter-chr q23.2 q22.3 99272 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA4C-IGFBP2 SEMA4C chr2 96863926 - IGFBP2 chr2 216660557 + Exonic hg38 PRAD TCGA-HC-A76W-01A 2 12 In-Frame Intra-chr q11.2 q35 99273 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCMF1-GGCX KCMF1 chr2 84971467 + GGCX chr2 85556260 - Exonic hg38 PRAD TCGA-HC-A76X-01A 1 6 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Seq+ 99274 ChimerSeq TCGA FAWG TCGA_RNA-Seq GGCX-KCMF1 GGCX chr2 85560815 - KCMF1 chr2 85027889 + Exonic hg38 PRAD TCGA-HC-A76X-01A 1 2 In-Frame Intra-chr p11.2 p11.2 Transcription factor 99275 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205680394 - ETV1 chr7 13939246 - Exonic hg38 PRAD TCGA-HC-A8CY-01A 275 914 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 99276 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAI1-PEX1 RAI1 chr17 17810855 + PEX1 chr7 92518918 - Exonic hg38 PRAD TCGA-HC-A8CY-01A 3 35 Out-of-frame Inter-chr p11.2 q21.2 Seq+ 99277 ChimerSeq TCGA FAWG TCGA_RNA-Seq BANP-SF3A3 BANP chr16 88027650 + SF3A3 chr1 37984779 - Exonic hg38 PRAD TCGA-HC-A8CY-01A 4 6 Out-of-frame Inter-chr q24.2 Tumor suppressor gene p34.3 Seq+ 99278 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNIP2-SLC35A3 FNIP2 chr4 158895865 + SLC35A3 chr1 99993537 + Exonic hg38 PRAD TCGA-HC-A8CY-01A 2 5 Out-of-frame Inter-chr q32.1 p21.2 Seq+ 99279 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRC2B-SPACA9 PRRC2B chr9 131394263 + SPACA9 chr9 132883911 + Exonic hg38 PRAD TCGA-HC-A8D0-01A 6 6 5'UTR-5'UTR Intra-chr q34.13 q34.13 99280 ChimerSeq TCGA FAWG TCGA_RNA-Seq PER2-SEPT2 PER2 chr2 238246291 - SEPT2 chr2 241315570 + Exonic hg38 PRAD TCGA-HC-A8D0-01A 3 14 Out-of-frame Intra-chr q37.3 Tumor suppressor gene q37.3 Seq+ 99281 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAT5B-PFAS STAT5B chr17 42210171 - PFAS chr17 8262920 + Exonic hg38 PRAD TCGA-HC-A8D0-01A 4 9 In-Frame Intra-chr q21.2 Transcription factor p13.1 Seq+ 99282 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGAPA1-SLC25A21 RALGAPA1 chr14 35808730 - SLC25A21 chr14 36875004 - Exonic hg38 PRAD TCGA-HC-A8D0-01A 1 2 In-Frame Intra-chr q13.2 q13.3 Seq+ 99283 ChimerSeq TCGA FAWG TCGA_RNA-Seq DROSHA-UGT3A2 DROSHA chr5 31526079 - UGT3A2 chr5 36064350 - Exonic hg38 PRAD TCGA-HC-A9TE-01A 5 7 Out-of-frame Intra-chr p13.3 p13.2 Seq+ 99284 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF3-AKR1C1 PHF3 chr6 63636150 + AKR1C1 chr10 4965914 + Exonic hg38 PRAD TCGA-HC-A9TE-01A 1 3 5'UTR-3'UTR Inter-chr q12 p15.1 99285 ChimerSeq TCGA FAWG TCGA_RNA-Seq URB1-CRYZL1 URB1 chr21 32373647 - CRYZL1 chr21 33631557 - Exonic hg38 PRAD TCGA-HC-A9TE-01A 1 3 CDS-5'UTR Intra-chr q22.11 q22.11 99286 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1671-SEC14L2 KIAA1671 chr22 25049364 + SEC14L2 chr22 30399643 + Exonic hg38 PRAD TCGA-HC-A9TH-01A 4 10 In-Frame Intra-chr q11.23 q12.2 Tumor suppressor gene Seq+ 99287 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPND-RABEP1 MPND chr19 4343600 + RABEP1 chr17 5361208 + Exonic hg38 PRAD TCGA-HC-A9TH-01A 1 12 Out-of-frame Inter-chr p13.3 p13.2 Seq+ 99288 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRG-FRMD4B PTPRG chr3 61748982 + FRMD4B chr3 69176656 - Exonic hg38 PRAD TCGA-HC-A9TH-01A 1 11 In-Frame Intra-chr p14.2 p14.1 Seq+ 99289 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL2L13-GAB4 BCL2L13 chr22 17655832 + GAB4 chr22 16965268 - Exonic hg38 PRAD TCGA-HI-7168-01A 66 310 In-Frame Intra-chr q11.21 q11.1 Seq+ 99290 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2R2-ITLN1 UBE2R2 chr9 33900271 + ITLN1 chr1 160876816 - Exonic hg38 PRAD TCGA-HI-7168-01A 9 29 Out-of-frame Inter-chr p13.3 q23.3 Seq+ 99291 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-IRS2 TMPRSS2 chr21 41488394 - IRS2 chr13 109756308 - Exonic hg38 PRAD TCGA-HI-7171-01A 142 1091 In-Frame Inter-chr q22.3 q34 Oncogene Seq+ 99292 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPK-SLC16A11 HNRNPK chr9 83974241 - SLC16A11 chr17 7041728 - Exonic hg38 PRAD TCGA-HI-7171-01A 43 373 Out-of-frame Inter-chr q21.32 p13.1 Seq+ 99293 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUX2-ANAPC11 CUX2 chr12 111034240 + ANAPC11 chr17 81894467 + Exonic hg38 PRAD TCGA-HI-7171-01A 6 45 CDS-5'UTR Inter-chr q24.11 Transcription factor q25.3 Seq+ 99294 ChimerSeq TCGA FAWG TCGA_RNA-Seq PART1-NDUFAF2 PART1 chr5 60488423 + NDUFAF2 chr5 61073125 + Exonic hg38 PRAD TCGA-HI-7171-01A 8 33 5'UTR-CDS Intra-chr q12.1 q12.1 Seq+ 99295 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAH2-WRAP53 DNAH2 chr17 7823967 + WRAP53 chr17 7687377 + Exonic hg38 PRAD TCGA-HI-7171-01A 3 41 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 99296 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF4G2-RSPO2 EIF4G2 chr11 10807255 - RSPO2 chr8 108082807 - Exonic hg38 PRAD TCGA-HI-7171-01A 5 17 CDS-5'UTR Inter-chr p15.4 q23.1 Seq+ 99297 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPS2-RBFOX3 GPS2 chr17 7314488 - RBFOX3 chr17 79307824 - Exonic hg38 PRAD TCGA-HI-7171-01A 3 16 CDS-5'UTR Intra-chr p13.1 q25.3 Seq+ 99298 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO7-PKNOX1 ANO7 chr2 241218381 + PKNOX1 chr21 43004326 + Exonic hg38 PRAD TCGA-HI-7171-01A 3 7 CDS-5'UTR Inter-chr q37.3 q22.3 Tumor suppressor gene Transcription factor 99299 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND1A-PBX3 DENND1A chr9 123583169 - PBX3 chr9 125929655 + Exonic hg38 PRAD TCGA-HI-7171-01A 1 7 In-Frame Intra-chr q33.3 q33.3 Transcription factor 99300 ChimerSeq TCGA FAWG TCGA_RNA-Seq EED-TPCN2 EED chr11 86245343 + TPCN2 chr11 69067503 + Exonic hg38 PRAD TCGA-HI-7171-01A 1 6 In-Frame Intra-chr q14.2 Tumor suppressor gene q13.3 99301 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC25-ARHGDIA TTC25 chr17 41930837 + ARHGDIA chr17 81869957 - Exonic hg38 PRAD TCGA-HI-7171-01A 1 3 5'UTR-5'UTR Intra-chr q21.2 q25.3 99302 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPNE4-MRPL3 CPNE4 chr3 132034567 - MRPL3 chr3 131501715 - Exonic hg38 PRAD TCGA-HI-7171-01A 1 2 5'UTR-CDS Intra-chr q22.1 q22.1 99303 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBX3-MVB12B PBX3 chr9 125748623 + MVB12B chr9 126340508 + Exonic hg38 PRAD TCGA-HI-7171-01A 1 2 Out-of-frame Intra-chr q33.3 Transcription factor q33.3 99304 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABR-GEMIN4 ABR chr17 1050050 - GEMIN4 chr17 748032 - Exonic hg38 PRAD TCGA-HI-7171-01A 1 1 5'UTR-CDS Intra-chr p13.3 p13.3 99305 ChimerSeq TCGA FAWG TCGA_RNA-Seq SORBS2-ELK4 SORBS2 chr4 185811664 - ELK4 chr1 205598649 - Exonic hg38 PRAD TCGA-J4-8198-01A 4 19 5'UTR-3'UTR Inter-chr q35.1 q32.1 Transcription factor Seq+ 99306 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPATCH8-NAGS GPATCH8 chr17 44474829 - NAGS chr17 44004701 + Exonic hg38 PRAD TCGA-J4-8198-01A 3 8 In-Frame Intra-chr q21.31 q21.31 Seq+ 99307 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTR2-SORBS2 ACTR2 chr2 65255694 + SORBS2 chr4 185775366 - Exonic hg38 PRAD TCGA-J4-8198-01A 1 6 CDS-5'UTR Inter-chr p14 TKL:STKR q35.1 Seq+ 99308 ChimerSeq TCGA FAWG TCGA_RNA-Seq THAP4-BOK THAP4 chr2 241601896 - BOK chr2 241570125 + Exonic hg38 PRAD TCGA-J4-8200-01A 1 19 Out-of-frame Intra-chr q37.3 Transcription factor q37.3 99309 ChimerSeq TCGA FAWG TCGA_RNA-Seq LINC-ORC5 LINC chr7 131052425 - ORC5 chr7 104168525 - Exonic hg38 PRAD TCGA-J4-A67K-01A 8 24 Out-of-frame Intra-chr q22.2 99310 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED4-DCLK1 MED4 chr13 48077153 - DCLK1 chr13 35947457 - Exonic hg38 PRAD TCGA-J4-A67K-01A 5 7 In-Frame Intra-chr q14.2 q13.3 CAMK:DCAMKL Seq+ 99311 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX30-ZDHHC3 DHX30 chr3 47841737 + ZDHHC3 chr3 44959460 - Exonic hg38 PRAD TCGA-J4-A67K-01A 3 13 CDS-5'UTR Intra-chr p21.31 Seq+ 99312 ChimerSeq TCGA FAWG TCGA_RNA-Seq XBP1-MIR22HG XBP1 chr22 28800298 - MIR22HG chr17 1716272 - Exonic hg38 PRAD TCGA-J4-A67K-01A 4 4 CDS-5'UTR Inter-chr q12.1 Transcription factor Seq+ 99313 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF1C-NDEL1 KIF1C chr17 5014837 + NDEL1 chr17 8444260 + Exonic hg38 PRAD TCGA-J4-A67K-01A 2 7 CDS-5'UTR Intra-chr p13.2 p13.1 Seq+ 99314 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDEL1-DHX30 NDEL1 chr17 8448686 + DHX30 chr3 47827347 + Exonic hg38 PRAD TCGA-J4-A67K-01A 2 5 In-Frame Inter-chr p13.1 p21.31 Seq+ 99315 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFP64-NDRG3 ZFP64 chr20 52186832 - NDRG3 chr20 36656532 - Exonic hg38 PRAD TCGA-J4-A67K-01A 1 5 Out-of-frame Intra-chr q13.2 Transcription factor q11.23 99316 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDEL1-KIF1C NDEL1 chr17 8436045 + KIF1C chr17 5014743 + Exonic hg38 PRAD TCGA-J4-A67K-01A 1 4 5'UTR-CDS Intra-chr p13.1 p13.2 99317 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAD4-SKAP1 SMAD4 chr18 51067187 + SKAP1 chr17 48396785 - Exonic hg38 PRAD TCGA-J4-A67L-01A 3 9 Out-of-frame Inter-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q21.32 Seq+ 99318 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFTUD2-SIN3A EFTUD2 chr17 44854269 - SIN3A chr15 75372209 - Exonic hg38 PRAD TCGA-J4-A67M-01A 3 8 Out-of-frame Inter-chr q21.31 q24.2 Seq+ 99319 ChimerSeq TCGA FAWG TCGA_RNA-Seq OS9-C12orf10 OS9 chr12 57696373 + C12orf10 chr12 53306680 + Exonic hg38 PRAD TCGA-J4-A67M-01A 2 1 In-Frame Intra-chr q13.3 q13.13 99320 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLPP1-ARL15 PLPP1 chr5 55534572 - ARL15 chr5 54171928 - Exonic hg38 PRAD TCGA-J4-A67N-01A 3 6 Out-of-frame Intra-chr q11.2 q11.2 99321 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOX2-EIF5A TOX2 chr20 44006792 + EIF5A chr17 7309615 + Exonic hg38 PRAD TCGA-J4-A67N-01A 1 12 In-Frame Inter-chr q13.12 p13.1 99322 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLPP1-MAPK1 PLPP1 chr5 55534572 - MAPK1 chr22 21788808 - Exonic hg38 PRAD TCGA-J4-A67N-01A 2 4 Out-of-frame Inter-chr q11.2 q11.22 Oncogene 99323 ChimerSeq TCGA FAWG TCGA_RNA-Seq FDPS-IPO9 FDPS chr1 155312395 + IPO9 chr1 201871161 + Exonic hg38 PRAD TCGA-J4-A67Q-01A 2 5 In-Frame Intra-chr q22 q32.1 Seq+ 99324 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST6GAL1-PSMC3 ST6GAL1 chr3 186963926 + PSMC3 chr11 47426282 - Exonic hg38 PRAD TCGA-J4-A67R-01A 11 52 5'UTR-5'UTR Inter-chr q27.3 p11.2 Seq+ 99325 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF41-SARNP RNF41 chr12 56221760 - SARNP chr12 55752840 - Exonic hg38 PRAD TCGA-J4-A67S-01A 119 596 3'UTR-3'UTR Intra-chr q13.3 q13.2 Seq+ 99326 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASZ1-PRKD2 CASZ1 chr1 10650692 - PRKD2 chr19 46681748 - Exonic hg38 PRAD TCGA-J4-A67S-01A 3 14 In-Frame Inter-chr p36.22 Transcription factor q13.32 Seq+ 99327 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASB8-DGKA ASB8 chr12 48153368 - DGKA chr12 55936423 + Exonic hg38 PRAD TCGA-J4-A67S-01A 1 12 In-Frame Intra-chr q13.11 q13.2 Seq+ 99328 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERG-TMPRSS2 ERG chr21 38575662 - TMPRSS2 chr21 41498189 - Exonic hg38 PRAD TCGA-J4-A67S-01A 3 4 Out-of-frame Intra-chr q22.2 Oncogene Transcription factor q22.3 Seq+ 99329 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFAF2-UBC NDUFAF2 chr5 60945382 + UBC chr12 124913774 - Exonic hg38 PRAD TCGA-J4-A67S-01A 3 1 CDS-5'UTR Inter-chr q12.1 q24.31 99330 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKD2-GLUD1 PRKD2 chr19 46689537 - GLUD1 chr10 87059273 - Exonic hg38 PRAD TCGA-J4-A67S-01A 2 1 In-Frame Inter-chr q13.32 q23.2 99331 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPD-HDAC5 CPD chr17 30385236 + HDAC5 chr17 44093834 - Exonic hg38 PRAD TCGA-J4-A67T-01A 77 126 In-Frame Intra-chr q11.2 Tumor suppressor gene q21.31 Seq+ 99332 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIMCH1-HOPX LIMCH1 chr4 41360936 + HOPX chr4 56656012 - Exonic hg38 PRAD TCGA-J4-A67T-01A 7 39 In-Frame Intra-chr p13 q12 Tumor suppressor gene Seq+ 99333 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSFA2-PTPN4 SSFA2 chr2 181922412 + PTPN4 chr2 119862536 + Exonic hg38 PRAD TCGA-J4-A67T-01A 1 3 Out-of-frame Intra-chr q31.3 q14.2 Seq+ 99334 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNBP4-MYBPC3 FNBP4 chr11 47731374 - MYBPC3 chr11 47351505 - Exonic hg38 PRAD TCGA-J4-A6G1-01A 3 12 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 99335 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLUAP1-NAA60 CLUAP1 chr16 3501089 + NAA60 chr16 3479471 + Exonic hg38 PRAD TCGA-J4-A6G1-01A 2 7 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 99336 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACPP-AXL ACPP chr3 132356855 + AXL chr19 41242883 + Exonic hg38 PRAD TCGA-J4-A6G3-01A 42 108 In-Frame Inter-chr q22.1 q13.2 TK:Axl Oncogene Seq+ 99337 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOL10-HDAC1 NOL10 chr2 10654481 - HDAC1 chr1 32316665 + Exonic hg38 PRAD TCGA-J4-A6G3-01A 1 1 Out-of-frame Inter-chr p25.1 p35.2 Tumor suppressor gene 99338 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM179B-SLC22A10 TMEM179B chr11 62789426 + SLC22A10 chr11 63297303 + Exonic hg38 PRAD TCGA-J4-A6M7-01A 4 61 In-Frame Intra-chr q12.3 q12.3 Seq+ 99339 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASZ1-DLEU1 CASZ1 chr1 10693874 - DLEU1 chr13 50527866 + Exonic hg38 PRAD TCGA-J4-A83I-01A 53 185 CDS-5'UTR Inter-chr p36.22 Transcription factor q14.2 Tumor suppressor gene Seq+ 99340 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAD1-JMJD1C ATAD1 chr10 87770952 - JMJD1C chr10 63209235 - Exonic hg38 PRAD TCGA-J4-A83I-01A 8 6 In-Frame Intra-chr q21.3 Seq+ 99341 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCT7-WDPCP CCT7 chr2 73244715 + WDPCP chr2 63711591 - Exonic hg38 PRAD TCGA-J4-A83I-01A 3 18 5'UTR-5'UTR Intra-chr p13.2 p15 Seq+ 99342 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNMB4-RTKN2 KCNMB4 chr12 70367070 + RTKN2 chr10 62236263 - Exonic hg38 PRAD TCGA-J4-A83I-01A 2 21 Out-of-frame Inter-chr q15 q21.2 Seq+ 99343 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGA-SCD MGA chr15 41621298 + SCD chr10 100348064 + Exonic hg38 PRAD TCGA-J4-A83I-01A 1 18 5'UTR-CDS Inter-chr q15.1 Transcription factor q24.31 Seq+ 99344 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDIA3-RPAP1 PDIA3 chr15 43746706 + RPAP1 chr15 41537201 - Exonic hg38 PRAD TCGA-J4-A83I-01A 2 9 CDS-5'UTR Intra-chr q15.3 q15.1 99345 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS17-RTKN2 ADAMTS17 chr15 99997385 - RTKN2 chr10 62262821 - Exonic hg38 PRAD TCGA-J4-A83I-01A 2 8 In-Frame Inter-chr q26.3 q21.2 Seq+ 99346 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTEN-KCNMB4 PTEN chr10 87961118 + KCNMB4 chr12 70400209 + Exonic hg38 PRAD TCGA-J4-A83I-01A 2 8 3'UTR-CDS Inter-chr q23.31 Oncogene Tumor suppressor gene q15 Seq+ 99347 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRM7-MBD2 GRM7 chr3 7146668 + MBD2 chr18 54189011 - Exonic hg38 PRAD TCGA-J4-A83I-01A 1 9 Out-of-frame Inter-chr p26.1 q21.2 Transcription factor Seq+ 99348 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP3-LSM14A LRP3 chr19 33194858 + LSM14A chr19 34194478 + Exonic hg38 PRAD TCGA-J4-A83I-01A 2 5 CDS-3'UTR Intra-chr q13.11 Seq+ 99349 ChimerSeq TCGA FAWG TCGA_RNA-Seq FUT10-TDRP FUT10 chr8 33453216 - TDRP chr8 494597 - Exonic hg38 PRAD TCGA-J4-A83I-01A 1 3 Out-of-frame Intra-chr p12 p23.3 99350 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWC1-SNTG2 WWC1 chr5 168414590 + SNTG2 chr2 1165548 + Exonic hg38 PRAD TCGA-J4-A83J-01A 16 41 CDS-3'UTR Inter-chr q34 Seq+ 99351 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCKAP1-LYPD6B NCKAP1 chr2 183023806 - LYPD6B chr2 149130883 + Exonic hg38 PRAD TCGA-J4-A83J-01A 16 40 CDS-5'UTR Intra-chr q32.1 q23.2 Seq+ 99352 ChimerSeq TCGA FAWG TCGA_RNA-Seq GULP1-NCKAP1 GULP1 chr2 188383889 + NCKAP1 chr2 182989186 - Exonic hg38 PRAD TCGA-J4-A83J-01A 5 23 5'UTR-CDS Intra-chr q32.1 q32.1 Seq+ 99353 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS9-SYNPR ADAMTS9 chr3 64594258 - SYNPR chr3 63556543 + Exonic hg38 PRAD TCGA-J4-A83J-01A 3 11 Out-of-frame Intra-chr p14.1 Tumor suppressor gene p14.2 Seq+ 99354 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205680394 - ETV1 chr7 13977480 - Exonic hg38 PRAD TCGA-J4-A83M-01A 100 563 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 99355 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO18-FRMD4A FBXO18 chr10 5890346 + FRMD4A chr10 13675044 - Exonic hg38 PRAD TCGA-J4-A83M-01A 2 3 Out-of-frame Intra-chr p15.1 p13 Seq+ 99356 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205680394 - ERG chr21 38445621 - Exonic hg38 PRAD TCGA-J4-A83N-01A 41 248 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 99357 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXP1-COQ10B FOXP1 chr3 71041328 - COQ10B chr2 197470070 + Exonic hg38 PRAD TCGA-J4-A83N-01A 1 8 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor q33.1 Seq+ 99358 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A3-FAF1 SLC45A3 chr1 205680394 - FAF1 chr1 50475679 - Exonic hg38 PRAD TCGA-J4-AATV-01A 3 18 5'UTR-CDS Intra-chr q32.1 p32.3 Seq+ 99359 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV6-PDE6H ETV6 chr12 11650160 + PDE6H chr12 14977972 + Exonic hg38 PRAD TCGA-J4-AATZ-01A 39 91 CDS-5'UTR Intra-chr p13.2 Tumor suppressor gene Transcription factor p12.3 Seq+ 99360 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEL1L-ANGEL1 SEL1L chr14 81485672 - ANGEL1 chr14 76809643 - Exonic hg38 PRAD TCGA-J4-AATZ-01A 10 49 In-Frame Intra-chr q31.1 q24.3 Seq+ 99361 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERINC5-ATP8B5P SERINC5 chr5 80255896 - ATP8B5P chr9 35444385 + Exonic hg38 PRAD TCGA-J4-AATZ-01A 7 24 CDS-5'UTR Inter-chr q14.1 p13.3 Seq+ 99362 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAD9-CCNA1 SMAD9 chr13 36853419 - CCNA1 chr13 36433033 + Exonic hg38 PRAD TCGA-J4-AATZ-01A 5 25 In-Frame Intra-chr q13.3 Transcription factor q13.3 Seq+ 99363 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM7A-AGK KDM7A chr7 140176744 - AGK chr7 141649263 + Exonic hg38 PRAD TCGA-J4-AATZ-01A 3 25 CDS-3'UTR Intra-chr q34 99364 ChimerSeq TCGA FAWG TCGA_RNA-Seq GGT1-PRODH GGT1 chr22 24594886 + PRODH chr22 18931198 - Exonic hg38 PRAD TCGA-J4-AATZ-01A 3 20 5'UTR-5'UTR Intra-chr q11.23 q11.21 Tumor suppressor gene Seq+ 99365 ChimerSeq TCGA FAWG TCGA_RNA-Seq TESK1-ATP8B5P TESK1 chr9 35606285 + ATP8B5P chr9 35433707 + Exonic hg38 PRAD TCGA-J4-AATZ-01A 5 9 5'UTR-5'UTR Intra-chr p13.3 TKL:LISK p13.3 Seq+ 99366 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGL-ARHGDIB AGL chr1 99916731 + ARHGDIB chr12 14950724 - Exonic hg38 PRAD TCGA-J4-AATZ-01A 1 20 CDS-5'UTR Inter-chr p21.2 p12.3 Seq+ 99367 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRR15L-GPATCH8 PRR15L chr17 47957657 - GPATCH8 chr17 44406051 - Exonic hg38 PRAD TCGA-J4-AATZ-01A 3 10 5'UTR-CDS Intra-chr q21.32 q21.31 Seq+ 99368 ChimerSeq TCGA FAWG TCGA_RNA-Seq CORO2A-KBTBD4 CORO2A chr9 98192559 - KBTBD4 chr11 47578028 - Exonic hg38 PRAD TCGA-J4-AATZ-01A 2 13 5'UTR-5'UTR Inter-chr q22.33 p11.2 Seq+ 99369 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK1-C1orf115 MARK1 chr1 220581118 + C1orf115 chr1 220696612 + Exonic hg38 PRAD TCGA-J4-AATZ-01A 2 8 In-Frame Intra-chr q41 CAMK:CAMKL Oncogene q41 Seq+ 99370 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITCH-EYA2 ITCH chr20 34369470 + EYA2 chr20 47143059 + Exonic hg38 PRAD TCGA-J4-AATZ-01A 2 4 5'UTR-CDS Intra-chr q11.22 q13.12 99371 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRK3-ZNRF3 GRK3 chr22 25565153 + ZNRF3 chr22 28987076 + Exonic hg38 PRAD TCGA-J4-AATZ-01A 1 6 Out-of-frame Intra-chr q12.1 q12.1 99372 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF12-C14orf1 TCF12 chr15 57063823 + C14orf1 chr14 75651889 - Exonic hg38 PRAD TCGA-J4-AATZ-01A 1 2 Out-of-frame Inter-chr q21.3 Oncogene Transcription factor q24.3 99373 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYB561-PHB CYB561 chr17 63446245 - PHB chr17 49405204 - Exonic hg38 PRAD TCGA-J9-A52B-01A 7 22 5'UTR-CDS Intra-chr q23.3 q21.33 Tumor suppressor gene Seq+ 99374 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHM1-NT5C3B PLEKHM1 chr17 45468209 - NT5C3B chr17 41828952 - Exonic hg38 PRAD TCGA-J9-A52B-01A 2 8 5'UTR-CDS Intra-chr q21.2 Seq+ 99375 ChimerSeq TCGA FAWG TCGA_RNA-Seq CERK-NSMAF CERK chr22 46720086 - NSMAF chr8 58584200 - Exonic hg38 PRAD TCGA-J9-A52C-01A 1 2 In-Frame Inter-chr q13.31 q12.1 99376 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF2A-RNF180 KIF2A chr5 62306536 + RNF180 chr5 64369615 + Exonic hg38 PRAD TCGA-J9-A52D-01A 10 25 In-Frame Intra-chr q12.1 q12.3 Tumor suppressor gene Seq+ 99377 ChimerSeq TCGA FAWG TCGA_RNA-Seq UGGT2-TRPC4 UGGT2 chr13 96023040 - TRPC4 chr13 37783360 - Exonic hg38 PRAD TCGA-J9-A52D-01A 5 35 CDS-5'UTR Intra-chr q32.1 q13.3 Seq+ 99378 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZSWIM6-CWC27 ZSWIM6 chr5 61332948 + CWC27 chr5 64971703 + Exonic hg38 PRAD TCGA-J9-A52D-01A 2 14 In-Frame Intra-chr q12.1 q12.3 Seq+ 99379 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACROD2-C9orf3 MACROD2 chr20 14684959 + C9orf3 chr9 95086682 + Exonic hg38 PRAD TCGA-J9-A52D-01A 2 1 Out-of-frame Inter-chr p12.1 q22.32 99380 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELOA-ZCCHC11 ELOA chr1 23757125 + ZCCHC11 chr1 52408460 - Exonic hg38 PRAD TCGA-J9-A52E-01A 1 20 Out-of-frame Intra-chr p36.11 p32.3 99381 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF589-ALS2CL ZNF589 chr3 48257022 + ALS2CL chr3 46689465 - Exonic hg38 PRAD TCGA-J9-A52E-01A 1 6 CDS-5'UTR Intra-chr p21.31 Transcription factor p21.31 Seq+ 99382 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGF13-DYM FGF13 chrX 138857512 - DYM chr18 49163787 - Exonic hg38 PRAD TCGA-J9-A52E-01A 2 1 Out-of-frame Inter-chr q27.1 q21.1 99383 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAN2C1-GAMT MAN2C1 chr15 75355567 - GAMT chr19 1397499 - Exonic hg38 PRAD TCGA-J9-A8CK-01A 16 28 3'UTR-CDS Inter-chr q24.2 p13.3 99384 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMG6-C10orf11 SMG6 chr17 2172658 - C10orf11 chr10 76557209 + Exonic hg38 PRAD TCGA-J9-A8CK-01A 7 37 Out-of-frame Inter-chr p13.3 Seq+ 99385 ChimerSeq TCGA FAWG TCGA_RNA-Seq PI4K2A-AS3MT PI4K2A chr10 97667120 + AS3MT chr10 102890544 + Exonic hg38 PRAD TCGA-J9-A8CK-01A 10 15 In-Frame Intra-chr q24.2 q24.32 Seq+ 99386 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP1-EFCAB7 USP1 chr1 62437400 + EFCAB7 chr1 63561709 + Exonic hg38 PRAD TCGA-J9-A8CK-01A 3 27 5'UTR-CDS Intra-chr p31.3 p31.3 Seq+ 99387 ChimerSeq TCGA FAWG TCGA_RNA-Seq VKORC1L1-RABGEF1 VKORC1L1 chr7 65873565 + RABGEF1 chr7 66805140 + Exonic hg38 PRAD TCGA-J9-A8CK-01A 2 7 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 99388 ChimerSeq TCGA FAWG TCGA_RNA-Seq LINC-ATP6V0A4 LINC chr7 131107720 - ATP6V0A4 chr7 138745280 - Exonic hg38 PRAD TCGA-J9-A8CK-01A 1 10 Out-of-frame Intra-chr q34 99389 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPC-WRN HNRNPC chr14 21230319 - WRN chr8 31172995 + Exonic hg38 PRAD TCGA-J9-A8CK-01A 2 4 Out-of-frame Inter-chr q11.2 p12 Oncogene Seq+ 99390 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOB1B-AMBN MOB1B chr4 70902550 + AMBN chr4 70592317 + Exonic hg38 PRAD TCGA-J9-A8CL-01A 30 84 5'UTR-5'UTR Intra-chr q13.3 Tumor suppressor gene q13.3 Seq+ 99391 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR107-GARNL3 GPR107 chr9 130099532 + GARNL3 chr9 127393083 + Exonic hg38 PRAD TCGA-J9-A8CL-01A 9 50 Out-of-frame Intra-chr q34.11 q33.3 Seq+ 99392 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABHD18-SLC25A31 ABHD18 chr4 127989821 + SLC25A31 chr4 127773386 + Exonic hg38 PRAD TCGA-J9-A8CL-01A 14 12 Out-of-frame Intra-chr q28.2 q28.1 99393 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP1-SP140L AGAP1 chr2 235494849 + SP140L chr2 230396757 + Exonic hg38 PRAD TCGA-J9-A8CL-01A 7 29 Out-of-frame Intra-chr q37.2 q37.1 Transcription factor Seq+ 99394 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIAS1-ZNF609 PIAS1 chr15 68054350 + ZNF609 chr15 64678116 + Exonic hg38 PRAD TCGA-J9-A8CL-01A 5 6 In-Frame Intra-chr q23 Tumor suppressor gene q22.31 Transcription factor Seq+ 99395 ChimerSeq TCGA FAWG TCGA_RNA-Seq FIG4-CCDC162P FIG4 chr6 109691501 + CCDC162P chr6 109227446 + Exonic hg38 PRAD TCGA-J9-A8CL-01A 2 12 CDS-5'UTR Intra-chr q21 q21 99396 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBL-CXCR5 CBL chr11 119232695 + CXCR5 chr11 118893596 + Exonic hg38 PRAD TCGA-J9-A8CL-01A 2 6 Out-of-frame Intra-chr q23.3 Oncogene Tumor suppressor gene q23.3 Seq+ 99397 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO9A-PARP6 MYO9A chr15 72027731 - PARP6 chr15 72258132 - Exonic hg38 PRAD TCGA-J9-A8CL-01A 1 3 Out-of-frame Intra-chr q23 q23 Seq+ 99398 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOCAD-C10orf90 FOCAD chr9 20990374 + C10orf90 chr10 126505085 - Exonic hg38 PRAD TCGA-J9-A8CM-01A 1 6 In-Frame Inter-chr p21.3 q26.2 99399 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD6-SNX21 CHD6 chr20 41415185 - SNX21 chr20 45840433 + Exonic hg38 PRAD TCGA-J9-A8CN-01A 9 51 Out-of-frame Intra-chr q12 q13.12 Seq+ 99400 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPRE1-TM9SF4 MAPRE1 chr20 32839856 + TM9SF4 chr20 32133013 + Exonic hg38 PRAD TCGA-J9-A8CN-01A 11 27 In-Frame Intra-chr q11.21 q11.21 Seq+ 99401 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFCAB8-TNNC2 EFCAB8 chr20 32896527 + TNNC2 chr20 45824834 - Exonic hg38 PRAD TCGA-J9-A8CN-01A 5 13 In-Frame Intra-chr q11.21 q13.12 Seq+ 99402 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF716-C7orf72 ZNF716 chr7 57450327 + C7orf72 chr7 50151450 + Exonic hg38 PRAD TCGA-J9-A8CP-01A 23 148 Out-of-frame Intra-chr p11.2 Transcription factor p12.2 Seq+ 99403 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOCAD-PDZRN4 FOCAD chr9 20789608 + PDZRN4 chr12 41552656 + Exonic hg38 PRAD TCGA-J9-A8CP-01A 3 15 In-Frame Inter-chr p21.3 q12 Seq+ 99404 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRR16-MALRD1 PRR16 chr5 120464645 + MALRD1 chr10 19066719 + Exonic hg38 PRAD TCGA-J9-A8CP-01A 4 7 Out-of-frame Inter-chr q23.1 p12.31 99405 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLPP1-HCN1 PLPP1 chr5 55534572 - HCN1 chr5 45353246 - Exonic hg38 PRAD TCGA-KC-A4BL-01A 4 5 Out-of-frame Intra-chr q11.2 p12 99406 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTLL1-MCAT TTLL1 chr22 43051801 - MCAT chr22 43141249 - Exonic hg38 PRAD TCGA-KC-A4BL-01A 1 3 In-Frame Intra-chr q13.2 q13.2 Seq+ 99407 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS17-CHAF1B RPS17 chr15 82538306 - CHAF1B chr21 36387598 + Exonic hg38 PRAD TCGA-KC-A4BN-01A 5 15 5'UTR-CDS Inter-chr q25.2 q22.12 Seq+ 99408 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGN2P46-TMPRSS2 HMGN2P46 chr15 45515892 + TMPRSS2 chr21 41498189 - Exonic hg38 PRAD TCGA-KC-A4BN-01A 2 26 5'UTR-5'UTR Inter-chr q21.1 q22.3 99409 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-GUCA2A TMPRSS2 chr21 41508081 - GUCA2A chr1 42163610 - Exonic hg38 PRAD TCGA-KC-A4BR-01A 106 120 5'UTR-CDS Inter-chr q22.3 p34.2 Seq+ 99410 ChimerSeq TCGA FAWG TCGA_RNA-Seq GUCA2A-ERG GUCA2A chr1 42163403 - ERG chr21 38445621 - Exonic hg38 PRAD TCGA-KC-A4BR-01A 41 62 Out-of-frame Inter-chr p34.2 q22.2 Oncogene Transcription factor Seq+ 99411 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD2-HIVEP3 SETD2 chr3 47163854 - HIVEP3 chr1 41918524 - Exonic hg38 PRAD TCGA-KC-A4BR-01A 2 3 3'UTR-3'UTR Inter-chr p21.31 Oncogene Tumor suppressor gene p34.2 Tumor suppressor gene Transcription factor 99412 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFF1-RBFOX1 AFF1 chr4 87047594 + RBFOX1 chr16 7052057 + Exonic hg38 PRAD TCGA-KC-A4BV-01A 6 22 In-Frame Inter-chr q21.3 Oncogene p13.3 Seq+ 99413 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT9-CRAT SEPT9 chr17 77307197 + CRAT chr9 129104306 - Exonic hg38 PRAD TCGA-KC-A4BV-01A 3 15 Out-of-frame Inter-chr q34.11 Seq+ 99414 ChimerSeq TCGA FAWG TCGA_RNA-Seq BACE2-TMPRSS2 BACE2 chr21 41257326 + TMPRSS2 chr21 41476620 - Exonic hg38 PRAD TCGA-KC-A4BV-01A 5 6 Out-of-frame Intra-chr q22.2 q22.3 Seq+ 99415 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSRP1-CAPZA1 RSRP1 chr1 25337040 - CAPZA1 chr1 112647210 + Exonic hg38 PRAD TCGA-KC-A4BV-01A 1 4 5'UTR-CDS Intra-chr p36.11 p13.2 99416 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRIM1-VIT CRIM1 chr2 36356623 + VIT chr2 36754921 + Exonic hg38 PRAD TCGA-KC-A7F3-01A 2 14 Out-of-frame Intra-chr p22.2 p22.2 Seq+ 99417 ChimerSeq TCGA FAWG TCGA_RNA-Seq ISOC1-CCDC192 ISOC1 chr5 129107062 + CCDC192 chr5 127941182 + Exonic hg38 PRAD TCGA-KC-A7F3-01A 3 9 Out-of-frame Intra-chr q23.3 q23.2 99418 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H15-CPS1 ZC3H15 chr2 186486457 + CPS1 chr2 210590106 + Exonic hg38 PRAD TCGA-KC-A7F3-01A 2 6 In-Frame Intra-chr q32.1 q34 Seq+ 99419 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHML-SLC39A11 CHML chr1 241639882 - SLC39A11 chr17 72947875 - Exonic hg38 PRAD TCGA-KC-A7F5-01A 3 9 5'UTR-CDS Inter-chr q43 q25.1 99420 ChimerSeq TCGA FAWG TCGA_RNA-Seq OPN3-SLC39A11 OPN3 chr1 241639882 - SLC39A11 chr17 72947875 - Exonic hg38 PRAD TCGA-KC-A7F5-01A 3 9 Out-of-frame Inter-chr q43 q25.1 Seq+ 99421 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC6-PAX9 TTC6 chr14 37596008 + PAX9 chr14 36662897 + Exonic hg38 PRAD TCGA-KC-A7F5-01A 2 6 5'UTR-CDS Intra-chr q21.1 q13.3 Transcription factor Seq+ 99422 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A11-OPN3 SLC39A11 chr17 73031556 - OPN3 chr1 241597997 - Exonic hg38 PRAD TCGA-KC-A7F5-01A 1 3 In-Frame Inter-chr q25.1 q43 Seq+ 99423 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBX5-HNRNPA1 CBX5 chr12 54280008 - HNRNPA1 chr12 54286662 + Exonic hg38 PRAD TCGA-KC-A7F6-01A 11 53 5'UTR-5'UTR Intra-chr q13.13 Tumor suppressor gene q13.13 Seq+ 99424 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADNP-SCCPDH ADNP chr20 50902017 - SCCPDH chr1 246735975 + Exonic hg38 PRAD TCGA-KC-A7F6-01A 13 38 In-Frame Inter-chr q13.13 Transcription factor q44 Seq+ 99425 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOM1L2-PECAM1 TOM1L2 chr17 17972262 - PECAM1 chr17 64378117 - Exonic hg38 PRAD TCGA-KC-A7F6-01A 5 10 In-Frame Intra-chr p11.2 Tumor suppressor gene q23.3 99426 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK12-APRT CDK12 chr17 39557058 + APRT chr16 88810148 - Exonic hg38 PRAD TCGA-KC-A7F6-01A 3 6 3'UTR-CDS Inter-chr q12 Oncogene q24.3 Seq+ 99427 ChimerSeq TCGA FAWG TCGA_RNA-Seq IQSEC1-SCCPDH IQSEC1 chr3 12911629 - SCCPDH chr1 246740172 + Exonic hg38 PRAD TCGA-KC-A7F6-01A 2 7 Out-of-frame Inter-chr p25.2 q44 Seq+ 99428 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP21-PDCD11 ARHGAP21 chr10 24721837 - PDCD11 chr10 103424984 + Exonic hg38 PRAD TCGA-KC-A7F6-01A 1 6 In-Frame Intra-chr p12.1 q24.33 Seq+ 99429 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPAS2-GNLY NPAS2 chr2 100949480 + GNLY chr2 85695320 + Exonic hg38 PRAD TCGA-KC-A7FA-01A 6 7 In-Frame Intra-chr q11.2 Tumor suppressor gene Transcription factor p11.2 Seq+ 99430 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG4C-AKAIN1 ATG4C chr1 62784225 + AKAIN1 chr18 5145755 - Exonic hg38 PRAD TCGA-KC-A7FA-01A 2 3 5'UTR-CDS Inter-chr p31.3 p11.31 99431 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM35A-DOCK1 FAM35A chr10 87170974 + DOCK1 chr10 127403055 + Exonic hg38 PRAD TCGA-KC-A7FA-01A 1 3 Out-of-frame Intra-chr q23.2 q26.2 Seq+ 99432 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 41508081 - ETV4 chr17 43545367 - Exonic hg38 PRAD TCGA-KC-A7FD-01A 160 557 5'UTR-5'UTR Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 99433 ChimerSeq TCGA FAWG TCGA_RNA-Seq FXR2-TARBP1 FXR2 chr17 7605645 - TARBP1 chr1 234430301 - Exonic hg38 PRAD TCGA-KC-A7FD-01A 7 8 In-Frame Inter-chr p13.1 q42.2 Seq+ 99434 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL39-SLC35G6 MRPL39 chr21 25599799 - SLC35G6 chr17 7481988 + Exonic hg38 PRAD TCGA-KC-A7FD-01A 3 3 CDS-3'UTR Inter-chr q21.3 Seq+ 99435 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF170-CSMD1 RNF170 chr8 42887728 - CSMD1 chr8 3616797 - Exonic hg38 PRAD TCGA-KC-A7FD-01A 1 9 Out-of-frame Intra-chr p11.21 p23.2 Tumor suppressor gene Seq+ 99436 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTERF4-SPAG16 MTERF4 chr2 241089188 - SPAG16 chr2 213364076 + Exonic hg38 PRAD TCGA-KK-A59V-01A 1 6 3'UTR-CDS Intra-chr q37.3 Transcription factor q34 99437 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCKAP5-MZT2A NCKAP5 chr2 133303037 - MZT2A chr2 131484218 - Exonic hg38 PRAD TCGA-KK-A59X-01A 2 31 Out-of-frame Intra-chr q21.2 q21.1 Seq+ 99438 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPHA6-CNTN6 EPHA6 chr3 96866889 + CNTN6 chr3 1401433 + Exonic hg38 PRAD TCGA-KK-A59X-01A 4 14 Out-of-frame Intra-chr q11.2 p26.3 Seq+ 99439 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLG1-CRYBG3 DLG1 chr3 197194425 - CRYBG3 chr3 97912167 + Exonic hg38 PRAD TCGA-KK-A59X-01A 4 13 In-Frame Intra-chr q29 Tumor suppressor gene q11.2 Seq+ 99440 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBR2-XPO5 UBR2 chr6 42683111 + XPO5 chr6 43534007 - Exonic hg38 PRAD TCGA-KK-A59X-01A 1 24 In-Frame Intra-chr p21.1 p21.1 Tumor suppressor gene Seq+ 99441 ChimerSeq TCGA FAWG TCGA_RNA-Seq THSD7B-DARS THSD7B chr2 136765687 + DARS chr2 135983454 - Exonic hg38 PRAD TCGA-KK-A59X-01A 4 4 5'UTR-5'UTR Intra-chr q22.1 q21.3 Seq+ 99442 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCYT1A-EPHA6 PCYT1A chr3 196287532 - EPHA6 chr3 97405150 + Exonic hg38 PRAD TCGA-KK-A59X-01A 2 6 5'UTR-CDS Intra-chr q29 q11.2 Seq+ 99443 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARGLU1-CXCR4 ARGLU1 chr13 106567573 - CXCR4 chr2 136115912 - Exonic hg38 PRAD TCGA-KK-A59X-01A 1 4 Out-of-frame Inter-chr q33.3 q22.1 Seq+ 99444 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-TMEFF2 TMPRSS2 chr21 41480476 - TMEFF2 chr2 191999208 - Exonic hg38 PRAD TCGA-KK-A59Y-01A 22 70 In-Frame Inter-chr q22.3 q32.3 Tumor suppressor gene Seq+ 99445 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAALADL2-CCDC39 NAALADL2 chr3 174441032 + CCDC39 chr3 180679799 - Exonic hg38 PRAD TCGA-KK-A59Y-01A 4 5 Out-of-frame Intra-chr q26.31 q26.33 Seq+ 99446 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLPP1-DIAPH1 PLPP1 chr5 55534572 - DIAPH1 chr5 141587197 - Exonic hg38 PRAD TCGA-KK-A59Y-01A 3 5 Out-of-frame Intra-chr q11.2 q31.3 99447 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCFD1-GPHN SCFD1 chr14 30673347 + GPHN chr14 66681107 + Exonic hg38 PRAD TCGA-KK-A59Y-01A 1 4 Out-of-frame Intra-chr q12 q23.3 99448 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEFF2-TMPRSS2 TMEFF2 chr2 192184354 - TMPRSS2 chr21 41479282 - Exonic hg38 PRAD TCGA-KK-A59Y-01A 1 2 Out-of-frame Inter-chr q32.3 Tumor suppressor gene q22.3 99449 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANTR-PAGE5 KANTR chrX 53094284 + PAGE5 chrX 55221375 + Exonic hg38 PRAD TCGA-KK-A59Z-01A 19 35 5'UTR-5'UTR Intra-chr p11.22 p11.21 99450 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYRIP-MLH1 MYRIP chr3 39900926 + MLH1 chr3 37047519 + Exonic hg38 PRAD TCGA-KK-A5A1-01A 14 77 Out-of-frame Intra-chr p22.1 p22.2 Oncogene Tumor suppressor gene Seq+ 99451 ChimerSeq TCGA FAWG TCGA_RNA-Seq EYA2-SYS1 EYA2 chr20 47097168 + SYS1 chr20 45365619 + Exonic hg38 PRAD TCGA-KK-A5A1-01A 4 14 In-Frame Intra-chr q13.12 q13.12 Seq+ 99452 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRC2C-PRRX1 PRRC2C chr1 171485735 + PRRX1 chr1 170719726 + Exonic hg38 PRAD TCGA-KK-A5A1-01A 3 15 5'UTR-CDS Intra-chr q24.3 q24.2 Transcription factor Seq+ 99453 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL22-DNAJC11 RPL22 chr1 6197652 - DNAJC11 chr1 6654039 - Exonic hg38 PRAD TCGA-KK-A5A1-01A 3 14 In-Frame Intra-chr p36.31 p36.31 Tumor suppressor gene Seq+ 99454 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPN2-SLC5A10 EPN2 chr17 19237531 + SLC5A10 chr17 19013410 + Exonic hg38 PRAD TCGA-KK-A5A1-01A 4 7 5'UTR-CDS Intra-chr p11.2 p11.2 Seq+ 99455 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRUNE2-GNA14 PRUNE2 chr9 76823632 - GNA14 chr9 77434522 - Exonic hg38 PRAD TCGA-KK-A5A1-01A 1 13 In-Frame Intra-chr q21.2 q21.2 Seq+ 99456 ChimerSeq TCGA FAWG TCGA_RNA-Seq RELN-ORC5 RELN chr7 103629940 - ORC5 chr7 104126893 - Exonic hg38 PRAD TCGA-KK-A5A1-01A 2 4 In-Frame Intra-chr q22.1 q22.2 Seq+ 99457 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF1-H3F3A SMURF1 chr7 99143726 - H3F3A chr1 226071351 + Exonic hg38 PRAD TCGA-KK-A5A1-01A 2 1 Out-of-frame Inter-chr q42.12 Oncogene 99458 ChimerSeq TCGA FAWG TCGA_RNA-Seq HS3ST4-CACNG3 HS3ST4 chr16 25693151 + CACNG3 chr16 24346734 + Exonic hg38 PRAD TCGA-KK-A5A1-01A 1 4 Out-of-frame Intra-chr p12.1 p12.1 99459 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCA4-SLC44A2 SMARCA4 chr19 11003397 + SLC44A2 chr19 10626253 + Exonic hg38 PRAD TCGA-KK-A5A1-01A 1 3 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 99460 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF4G1-PTH2R EIF4G1 chr3 184328990 + PTH2R chr2 208824195 + Exonic hg38 PRAD TCGA-KK-A6DY-01A 3 24 CDS-3'UTR Inter-chr q27.1 q34 Seq+ 99461 ChimerSeq TCGA FAWG TCGA_RNA-Seq CARM1-CASP14 CARM1 chr19 10916497 + CASP14 chr19 15052206 + Exonic hg38 PRAD TCGA-KK-A6DY-01A 1 3 CDS-5'UTR Intra-chr p13.2 p13.12 Seq+ 99462 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD29-KC6 ANKRD29 chr18 23629853 - KC6 chr18 41467780 - Exonic hg38 PRAD TCGA-KK-A6E0-01A 4 23 CDS-3'UTR Intra-chr q11.2 q12.3 99463 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP24-MAPK10 ARHGAP24 chr4 85778965 + MAPK10 chr4 86194407 - Exonic hg38 PRAD TCGA-KK-A6E0-01A 1 3 5'UTR-5'UTR Intra-chr q21.23 q21.3 Tumor suppressor gene Seq+ 99464 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMYD2-MGST2 SMYD2 chr1 214281427 + MGST2 chr4 139695197 + Exonic hg38 PRAD TCGA-KK-A6E0-01A 1 2 In-Frame Inter-chr q32.3 q31.1 99465 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARF1-HSPA9 ARF1 chr1 228082765 + HSPA9 chr5 138569049 - Exonic hg38 PRAD TCGA-KK-A6E1-01A 93 172 5'UTR-CDS Inter-chr q42.13 Tumor suppressor gene q31.2 Seq+ 99466 ChimerSeq TCGA FAWG TCGA_RNA-Seq RYK-KALRN RYK chr3 134188837 - KALRN chr3 124430656 + Exonic hg38 PRAD TCGA-KK-A6E1-01A 63 276 Out-of-frame Intra-chr q22.2 TK:Ryk q21.1 Seq+ 99467 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLA2G16-SNHG1 PLA2G16 chr11 63598061 - SNHG1 chr11 62853833 - Exonic hg38 PRAD TCGA-KK-A6E1-01A 15 115 Out-of-frame Intra-chr q13.1 Tumor suppressor gene q12.3 Seq+ 99468 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERG-KCNJ6 ERG chr21 38575662 - KCNJ6 chr21 37625484 - Exonic hg38 PRAD TCGA-KK-A6E1-01A 15 42 Out-of-frame Intra-chr q22.2 Oncogene Transcription factor q22.13 Seq+ 99469 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D25-HSPA9 TBC1D25 chrX 48545023 + HSPA9 chr5 138561789 - Exonic hg38 PRAD TCGA-KK-A6E1-01A 6 70 Out-of-frame Inter-chr p11.23 q31.2 Seq+ 99470 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRRM1-FAU SRRM1 chr1 24647802 + FAU chr11 65120774 - Exonic hg38 PRAD TCGA-KK-A6E1-01A 11 38 Out-of-frame Inter-chr p36.11 q13.1 Seq+ 99471 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTBP1-UBE3C PTBP1 chr19 804438 + UBE3C chr7 157216867 + Exonic hg38 PRAD TCGA-KK-A6E1-01A 2 65 In-Frame Inter-chr p13.3 q36.3 Seq+ 99472 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAU-SRRM1 FAU chr11 65120722 - SRRM1 chr1 24647591 + Exonic hg38 PRAD TCGA-KK-A6E1-01A 3 45 Out-of-frame Inter-chr q13.1 p36.11 Seq+ 99473 ChimerSeq TCGA FAWG TCGA_RNA-Seq EVA1C-CBR3 EVA1C chr21 32453508 + CBR3 chr21 36146076 + Exonic hg38 PRAD TCGA-KK-A6E1-01A 6 26 Out-of-frame Intra-chr q22.11 q22.12 Seq+ 99474 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOX3-C16orf97 TOX3 chr16 52546637 - C16orf97 chr16 52058428 - Exonic hg38 PRAD TCGA-KK-A6E1-01A 4 9 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 99475 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE4D-PCCB PDE4D chr5 59988488 - PCCB chr3 136255856 + Exonic hg38 PRAD TCGA-KK-A6E1-01A 1 20 Out-of-frame Inter-chr q12.1 q22.3 99476 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTLL7-SAMD13 TTLL7 chr1 83904079 - SAMD13 chr1 84325637 + Exonic hg38 PRAD TCGA-KK-A6E1-01A 4 8 Out-of-frame Intra-chr p31.1 p31.1 Seq+ 99477 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARMC8-IFT57 ARMC8 chr3 138274544 + IFT57 chr3 108191643 - Exonic hg38 PRAD TCGA-KK-A6E1-01A 1 9 In-Frame Intra-chr q22.3 q13.13 Seq+ 99478 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETS2-WRB ETS2 chr21 38806120 + WRB chr21 39393166 + Exonic hg38 PRAD TCGA-KK-A6E1-01A 2 5 Out-of-frame Intra-chr q22.2 Tumor suppressor gene Transcription factor q22.2 Seq+ 99479 ChimerSeq TCGA FAWG TCGA_RNA-Seq U2SURP-PARP9 U2SURP chr3 143038960 + PARP9 chr3 122537073 - Exonic hg38 PRAD TCGA-KK-A6E1-01A 2 5 Out-of-frame Intra-chr q23 q21.1 Seq+ 99480 ChimerSeq TCGA FAWG TCGA_RNA-Seq MNAT1-RASGEF1B MNAT1 chr14 60734951 + RASGEF1B chr4 81459514 - Exonic hg38 PRAD TCGA-KK-A6E1-01A 1 5 CDS-5'UTR Inter-chr q23.1 q21.22 Seq+ 99481 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXNA1-DZIP1L PLXNA1 chr3 126989787 + DZIP1L chr3 138092544 - Exonic hg38 PRAD TCGA-KK-A6E1-01A 1 2 In-Frame Intra-chr q21.3 q22.3 Seq+ 99482 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOB1A-DUSP11 MOB1A chr2 74178661 - DUSP11 chr2 73778376 - Exonic hg38 PRAD TCGA-KK-A6E2-01A 10 64 In-Frame Intra-chr p13.1 Tumor suppressor gene p13.1 Seq+ 99483 ChimerSeq TCGA FAWG TCGA_RNA-Seq THRA-CDC6 THRA chr17 40063092 + CDC6 chr17 40300828 + Exonic hg38 PRAD TCGA-KK-A6E2-01A 3 2 5'UTR-3'UTR Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.2 99484 ChimerSeq TCGA FAWG TCGA_RNA-Seq WASL-FEZF1 WASL chr7 123748618 - FEZF1 chr7 122304511 - Exonic hg38 PRAD TCGA-KK-A6E2-01A 1 9 CDS-5'UTR Intra-chr q31.32 q31.32 Transcription factor Seq+ 99485 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH3-SNTB2 CDH3 chr16 68645750 + SNTB2 chr16 69299590 + Exonic hg38 PRAD TCGA-KK-A6E2-01A 1 4 In-Frame Intra-chr q22.1 Seq+ 99486 ChimerSeq TCGA FAWG TCGA_RNA-Seq RERE-EXOSC7 RERE chr1 8655973 - EXOSC7 chr3 44989140 + Exonic hg38 PRAD TCGA-KK-A6E3-01A 2 3 Out-of-frame Inter-chr p36.23 p21.31 Seq+ 99487 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPHN-RAD51B GPHN chr14 66776521 + RAD51B chr14 67835080 + Exonic hg38 PRAD TCGA-KK-A6E4-01A 3 4 In-Frame Intra-chr q23.3 q24.1 Seq+ 99488 ChimerSeq TCGA FAWG TCGA_RNA-Seq RYK-KALRN RYK chr3 134188837 - KALRN chr3 124430656 + Exonic hg38 PRAD TCGA-KK-A6E5-01A 1 1 Out-of-frame Intra-chr q22.2 TK:Ryk q21.1 Seq+ 99489 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDIA4-HACE1 PDIA4 chr7 149028321 - HACE1 chr6 104784485 - Exonic hg38 PRAD TCGA-KK-A6E6-01A 2 19 Out-of-frame Inter-chr q36.1 q16.3 Tumor suppressor gene Seq+ 99490 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK1-RBM47 ROCK1 chr18 21070532 - RBM47 chr4 40544506 - Exonic hg38 PRAD TCGA-KK-A6E6-01A 2 10 CDS-5'UTR Inter-chr q11.1 AGC:DMPK p14 Seq+ 99491 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERG-SRPK2 ERG chr21 38575662 - SRPK2 chr7 105399253 - Exonic hg38 PRAD TCGA-KK-A6E6-01A 3 4 5'UTR-5'UTR Inter-chr q22.2 Oncogene Transcription factor q22.3 CMGC:SRPK Seq+ 99492 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATM-CARD18 ATM chr11 108347365 + CARD18 chr11 105139078 - Exonic hg38 PRAD TCGA-KK-A6E8-01A 1 13 In-Frame Intra-chr q22.3 Atypical:PIKK Oncogene Tumor suppressor gene q22.3 Seq+ 99493 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205680394 - ETV1 chr7 13939246 - Exonic hg38 PRAD TCGA-KK-A7AP-01A 191 828 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 99494 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIA1-ACTR2 TIA1 chr2 70236079 - ACTR2 chr2 65251027 + Exonic hg38 PRAD TCGA-KK-A7AP-01A 19 44 In-Frame Intra-chr p13.3 p14 TKL:STKR Seq+ 99495 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2orf42-ACTR2 C2orf42 chr2 70236079 - ACTR2 chr2 65251027 + Exonic hg38 PRAD TCGA-KK-A7AP-01A 7 10 5'UTR-CDS Intra-chr p13.3 p14 TKL:STKR Seq+ 99496 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHLDB1-RNF121 PHLDB1 chr11 118613450 + RNF121 chr11 71960750 + Exonic hg38 PRAD TCGA-KK-A7AP-01A 1 18 5'UTR-5'UTR Intra-chr q23.3 q13.4 Seq+ 99497 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASGRF1-HOMER2 RASGRF1 chr15 79090223 - HOMER2 chr15 82892841 - Exonic hg38 PRAD TCGA-KK-A7AP-01A 2 9 Out-of-frame Intra-chr q25.1 q25.2 Tumor suppressor gene Seq+ 99498 ChimerSeq TCGA FAWG TCGA_RNA-Seq COX7A2-USP18 COX7A2 chr6 75243717 - USP18 chr22 18176772 + Exonic hg38 PRAD TCGA-KK-A7AP-01A 1 1 Out-of-frame Inter-chr q14.1 q11.21 99499 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4C-PTPRD KDM4C chr9 6990524 + PTPRD chr9 10341017 - Exonic hg38 PRAD TCGA-KK-A7AQ-01A 2 4 5'UTR-5'UTR Intra-chr p24.1 Oncogene Tumor suppressor gene Seq+ 99500 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANSL1L-RAPGEF4 KANSL1L chr2 210171149 - RAPGEF4 chr2 172917802 + Exonic hg38 PRAD TCGA-KK-A7AQ-01A 1 3 5'UTR-5'UTR Intra-chr q34 q31.1 99501 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSTN-DTD1 DSTN chr20 17570211 + DTD1 chr20 18744100 + Exonic hg38 PRAD TCGA-KK-A7AU-01A 2 36 In-Frame Intra-chr p12.1 p11.23 Seq+ 99502 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMS1-PHYHIPL BMS1 chr10 42802218 + PHYHIPL chr10 59236483 + Exonic hg38 PRAD TCGA-KK-A7AU-01A 6 12 Out-of-frame Intra-chr q11.21 q21.1 Seq+ 99503 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCARB1-SUB1 SCARB1 chr12 124863595 - SUB1 chr5 32598961 + Exonic hg38 PRAD TCGA-KK-A7AU-01A 1 31 In-Frame Inter-chr q24.31 p13.3 Seq+ 99504 ChimerSeq TCGA FAWG TCGA_RNA-Seq GBAS-PHYHIPL GBAS chr7 55964701 + PHYHIPL chr10 59238588 + Exonic hg38 PRAD TCGA-KK-A7AU-01A 1 4 Out-of-frame Inter-chr q21.1 Seq+ 99505 ChimerSeq TCGA FAWG TCGA_RNA-Seq TASP1-MACROD2 TASP1 chr20 13580897 - MACROD2 chr20 14684843 + Exonic hg38 PRAD TCGA-KK-A7AU-01A 1 4 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 99506 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSR-STMN2 GSR chr8 30700081 - STMN2 chr8 79636802 + Exonic hg38 PRAD TCGA-KK-A7AV-01A 4 6 Out-of-frame Intra-chr p12 q21.13 Seq+ 99507 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM39A-MAATS1 TMEM39A chr3 119452447 - MAATS1 chr3 119715562 + Exonic hg38 PRAD TCGA-KK-A7AV-01A 1 5 Out-of-frame Intra-chr q13.33 q13.33 99508 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 41508081 - ETV4 chr17 43545367 - Exonic hg38 PRAD TCGA-KK-A7AW-01A 8 14 5'UTR-5'UTR Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 99509 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC39A-MRPL37 TTC39A chr1 51305977 - MRPL37 chr1 54216141 + Exonic hg38 PRAD TCGA-KK-A7AW-01A 7 9 In-Frame Intra-chr p32.3 p32.3 Seq+ 99510 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT6A-TRAPPC9 KAT6A chr8 42048378 - TRAPPC9 chr8 140024079 - Exonic hg38 PRAD TCGA-KK-A7AW-01A 3 5 In-Frame Intra-chr p11.21 Oncogene q24.3 Seq+ 99511 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKD3-CEBPZ PRKD3 chr2 37324681 - CEBPZ chr2 37203008 - Exonic hg38 PRAD TCGA-KK-A7AW-01A 1 4 5'UTR-CDS Intra-chr p22.2 p22.2 Transcription factor 99512 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-EIF3E PVT1 chr8 127794734 + EIF3E chr8 108203503 - Exonic hg38 PRAD TCGA-KK-A7AZ-01A 237 1689 5'UTR-CDS Intra-chr q24.21 q23.1 Seq+ 99513 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ETV5 TMPRSS2 chr21 41489507 - ETV5 chr3 186105942 - Exonic hg38 PRAD TCGA-KK-A7AZ-01A 58 170 CDS-5'UTR Inter-chr q22.3 q27.2 Oncogene Transcription factor KB Pub Seq+ 99514 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-DGKG TMPRSS2 chr21 41489507 - DGKG chr3 186105942 - Exonic hg38 PRAD TCGA-KK-A7AZ-01A 58 160 CDS-3'UTR Inter-chr q22.3 q27.3 Seq+ 99515 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR1204-EIF3E MIR1204 chr8 127796008 + EIF3E chr8 108203503 - Exonic hg38 PRAD TCGA-KK-A7AZ-01A 27 116 5'UTR-CDS Intra-chr q24.21 q23.1 99516 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPM8-SLC4A4 TRPM8 chr2 233996516 + SLC4A4 chr4 71440616 + Exonic hg38 PRAD TCGA-KK-A7AZ-01A 13 22 Out-of-frame Inter-chr q37.1 q13.3 Seq+ 99517 ChimerSeq TCGA FAWG TCGA_RNA-Seq AUNIP-TRPM8 AUNIP chr1 25859280 - TRPM8 chr2 233996326 + Exonic hg38 PRAD TCGA-KK-A7AZ-01A 9 9 Out-of-frame Inter-chr p36.11 q37.1 Seq+ 99518 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC4A4-AUNIP SLC4A4 chr4 71397653 + AUNIP chr1 25835846 - Exonic hg38 PRAD TCGA-KK-A7AZ-01A 2 12 Out-of-frame Inter-chr q13.3 p36.11 Seq+ 99519 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFLNA-EIF2S2 RFLNA chr12 123974020 + EIF2S2 chr20 34105545 - Exonic hg38 PRAD TCGA-KK-A7B0-01A 4 5 5'UTR-CDS Inter-chr q24.31 q11.22 99520 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF664-EIF2S2 ZNF664 chr12 123974020 + EIF2S2 chr20 34105545 - Exonic hg38 PRAD TCGA-KK-A7B0-01A 4 5 5'UTR-CDS Inter-chr q24.31 Transcription factor q11.22 Seq+ 99521 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIAS1-HMCN2 PIAS1 chr15 68086750 + HMCN2 chr9 130422577 + Exonic hg38 PRAD TCGA-KK-A7B1-01A 13 57 In-Frame Inter-chr q23 Tumor suppressor gene q34.11 Seq+ 99522 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF38-LMOD2 RNF38 chr9 36400554 - LMOD2 chr7 123661860 + Exonic hg38 PRAD TCGA-KK-A7B1-01A 3 31 5'UTR-CDS Inter-chr p13.2 q31.32 Seq+ 99523 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPD1L-CNOT10 GPD1L chr3 32146734 + CNOT10 chr3 32708670 + Exonic hg38 PRAD TCGA-KK-A7B1-01A 5 14 In-Frame Intra-chr p22.3 p22.3 Seq+ 99524 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLB1-PSD2 GLB1 chr3 33053491 - PSD2 chr5 139835723 + Exonic hg38 PRAD TCGA-KK-A7B1-01A 3 17 In-Frame Inter-chr p22.3 q31.2 Seq+ 99525 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMCD1-ZNF589 LMCD1 chr3 8501980 + ZNF589 chr3 48260813 + Exonic hg38 PRAD TCGA-KK-A7B1-01A 5 8 In-Frame Intra-chr p25.3 p21.31 Transcription factor Seq+ 99526 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDZRN3-THRB PDZRN3 chr3 73602354 - THRB chr3 24337371 - Exonic hg38 PRAD TCGA-KK-A7B1-01A 4 8 CDS-5'UTR Intra-chr p13 p24.2 Tumor suppressor gene Transcription factor Seq+ 99527 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED15-GPATCH2L MED15 chr22 20507746 + GPATCH2L chr14 76171843 + Exonic hg38 PRAD TCGA-KK-A7B1-01A 2 6 Out-of-frame Inter-chr q11.21 q24.3 Seq+ 99528 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASXL2-POMC ASXL2 chr2 25799385 - POMC chr2 25164792 - Exonic hg38 PRAD TCGA-KK-A7B2-01A 1 3 CDS-5'UTR Intra-chr p23.3 p23.3 99529 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDM2-BRI3BP MDM2 chr12 68820374 + BRI3BP chr12 125025344 + Exonic hg38 PRAD TCGA-KK-A7B2-01A 1000 1000 In-Frame Intra-chr q15 Oncogene q24.31 Seq+ 99530 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRAS2-FHIT RRAS2 chr11 14358763 - FHIT chr3 59922414 - Exonic hg38 PRAD TCGA-KK-A7B3-01A 19 157 In-Frame Inter-chr p15.2 p14.2 Tumor suppressor gene Seq+ 99531 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA8-OSBPL3 PLEKHA8 chr7 30060942 + OSBPL3 chr7 24809951 - Exonic hg38 PRAD TCGA-KK-A7B3-01A 2 4 In-Frame Intra-chr p14.3 p15.3 99532 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXA1-AIMP1 FOXA1 chr14 37591400 - AIMP1 chr4 106336869 + Exonic hg38 PRAD TCGA-KK-A7B4-01A 20 52 Out-of-frame Inter-chr q21.1 Tumor suppressor gene Transcription factor q24 Tumor suppressor gene Seq+ 99533 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLASRP-EXOC3L2 CLASRP chr19 45053177 + EXOC3L2 chr19 45234826 - Exonic hg38 PRAD TCGA-KK-A7B4-01A 5 110 5'UTR-5'UTR Intra-chr q13.32 q13.32 99534 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRF1-MLXIPL NRF1 chr7 129611824 + MLXIPL chr7 73616177 - Exonic hg38 PRAD TCGA-KK-A7B4-01A 10 73 5'UTR-CDS Intra-chr q32.2 Tumor suppressor gene Transcription factor q11.23 Transcription factor Seq+ 99535 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13B-AKAP7 VPS13B chr8 99136752 + AKAP7 chr6 131281530 + Exonic hg38 PRAD TCGA-KK-A7B4-01A 9 32 In-Frame Inter-chr q22.2 q23.2 Seq+ 99536 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR2J3-LGALS4 POLR2J3 chr7 102566997 - LGALS4 chr19 38806595 - Exonic hg38 PRAD TCGA-KK-A7B4-01A 4 19 3'UTR-5'UTR Inter-chr q22.1 Seq+ 99537 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZRANB3-TMEM163 ZRANB3 chr2 135531127 - TMEM163 chr2 134552091 - Exonic hg38 PRAD TCGA-KK-A7B4-01A 5 9 5'UTR-CDS Intra-chr q21.3 q21.3 Seq+ 99538 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNHG6-EPHX1 SNHG6 chr8 66925437 - EPHX1 chr1 225828725 + Exonic hg38 PRAD TCGA-KK-A7B4-01A 3 12 3'UTR-5'UTR Inter-chr q13.1 q42.12 Seq+ 99539 ChimerSeq TCGA FAWG TCGA_RNA-Seq GIGYF2-TMEM163 GIGYF2 chr2 232703489 + TMEM163 chr2 134552091 - Exonic hg38 PRAD TCGA-KK-A7B4-01A 1 17 5'UTR-CDS Intra-chr q37.1 q21.3 Seq+ 99540 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF19A-FAM177A1 RNF19A chr8 100309867 - FAM177A1 chr14 35102681 + Exonic hg38 PRAD TCGA-KK-A8I4-01A 27 49 5'UTR-3'UTR Inter-chr q22.2 q13.2 Seq+ 99541 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF3-R3HCC1 PHF3 chr6 63636150 + R3HCC1 chr8 23288506 + Exonic hg38 PRAD TCGA-KK-A8I4-01A 6 58 5'UTR-5'UTR Inter-chr q12 p21.3 Seq+ 99542 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAF3IP2-KIAA1324 TRAF3IP2 chr6 111575643 - KIAA1324 chr1 109185045 + Exonic hg38 PRAD TCGA-KK-A8I4-01A 2 8 In-Frame Inter-chr q21 p13.3 Seq+ 99543 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205680394 - ERG chr21 38445621 - Exonic hg38 PRAD TCGA-KK-A8I5-01A 21 133 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 99544 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRYL1-GJB6 CRYL1 chr13 20489370 - GJB6 chr13 20223495 - Exonic hg38 PRAD TCGA-KK-A8I5-01A 13 46 CDS-5'UTR Intra-chr q12.11 q12.11 Seq+ 99545 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOP14-CDK18 NOP14 chr4 2963125 - CDK18 chr1 205523147 + Exonic hg38 PRAD TCGA-KK-A8I5-01A 8 9 CDS-5'UTR Inter-chr p16.3 q32.1 Seq+ 99546 ChimerSeq TCGA FAWG TCGA_RNA-Seq SARAF-TNKS SARAF chr8 30082847 - TNKS chr8 9679951 + Exonic hg38 PRAD TCGA-KK-A8I5-01A 3 3 5'UTR-5'UTR Intra-chr p12 p23.1 99547 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARMC8-MRAS ARMC8 chr3 138188530 + MRAS chr3 138372866 + Exonic hg38 PRAD TCGA-KK-A8I5-01A 1 7 5'UTR-5'UTR Intra-chr q22.3 q22.3 99548 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDRG1-ERG NDRG1 chr8 133280235 - ERG chr21 38445624 - Exonic hg38 PRAD TCGA-KK-A8I6-01A 49 145 Out-of-frame Inter-chr q24.22 Tumor suppressor gene q22.2 Oncogene Transcription factor KB Pub Seq+ 99549 ChimerSeq TCGA FAWG TCGA_RNA-Seq EDEM1-GPD1L EDEM1 chr3 5188314 + GPD1L chr3 32128076 + Exonic hg38 PRAD TCGA-KK-A8I6-01A 9 40 In-Frame Intra-chr p26.1 p22.3 Seq+ 99550 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCT3-RAB13 CCT3 chr1 156333547 - RAB13 chr1 153984781 - Exonic hg38 PRAD TCGA-KK-A8I6-01A 6 44 In-Frame Intra-chr q22 q21.3 Seq+ 99551 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSA2-FIS1 NSA2 chr5 74774060 + FIS1 chr7 101240906 - Exonic hg38 PRAD TCGA-KK-A8I6-01A 5 13 In-Frame Inter-chr q13.3 q22.1 Seq+ 99552 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASEF-OSTF1 RASEF chr9 82990391 - OSTF1 chr9 75117504 + Exonic hg38 PRAD TCGA-KK-A8I6-01A 5 13 Out-of-frame Intra-chr q21.32 q21.13 Seq+ 99553 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF13B-PNOC KIF13B chr8 29165662 - PNOC chr8 28329135 + Exonic hg38 PRAD TCGA-KK-A8I6-01A 2 5 CDS-5'UTR Intra-chr p12 p21.1 Seq+ 99554 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNAP91-SMPX SNAP91 chr6 83593478 - SMPX chrX 21743836 - Exonic hg38 PRAD TCGA-KK-A8I6-01A 1 7 Out-of-frame Inter-chr q14.2 p22.12 Seq+ 99555 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC30A4-PVT1 SLC30A4 chr15 45521964 - PVT1 chr8 128070160 + Exonic hg38 PRAD TCGA-KK-A8I7-01A 2 16 CDS-5'UTR Inter-chr q21.1 q24.21 99556 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKL2-SCNN1B MKL2 chr16 14218998 + SCNN1B chr16 23352801 + Exonic hg38 PRAD TCGA-KK-A8I7-01A 1 4 Out-of-frame Intra-chr p13.12 p12.2 Seq+ 99557 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLX4-LITAF SLX4 chr16 3594453 - LITAF chr16 11556735 - Exonic hg38 PRAD TCGA-KK-A8I7-01A 1 3 CDS-5'UTR Intra-chr p13.3 Tumor suppressor gene p13.13 Tumor suppressor gene 99558 ChimerSeq TCGA FAWG TCGA_RNA-Seq C12orf29-IRAK4 C12orf29 chr12 88035738 + IRAK4 chr12 43768103 + Exonic hg38 PRAD TCGA-KK-A8I8-01A 7 22 CDS-5'UTR Intra-chr q21.32 q12 TKL:IRAK Seq+ 99559 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPU-SLC36A4 HNRNPU chr1 244858011 - SLC36A4 chr11 93185814 - Exonic hg38 PRAD TCGA-KK-A8I8-01A 3 8 Out-of-frame Inter-chr q44 q21 Seq+ 99560 ChimerSeq TCGA FAWG TCGA_RNA-Seq APBA1-RAD23B APBA1 chr9 69672153 - RAD23B chr9 107306379 + Exonic hg38 PRAD TCGA-KK-A8I9-01A 5 5 3'UTR-CDS Intra-chr q21.12 q31.2 Tumor suppressor gene Seq+ 99561 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHKA2-ADGRG2 PHKA2 chrX 18983855 - ADGRG2 chrX 18999960 - Exonic hg38 PRAD TCGA-KK-A8IA-01A 17 34 Out-of-frame Intra-chr p22.13 p22.13 99562 ChimerSeq TCGA FAWG TCGA_RNA-Seq HKR1-CHMP2A HKR1 chr19 37335257 + CHMP2A chr19 58552185 - Exonic hg38 PRAD TCGA-KK-A8IA-01A 3 6 Out-of-frame Intra-chr q13.12 Transcription factor q13.43 Seq+ 99563 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKDC-UBE2V2 PRKDC chr8 47953620 - UBE2V2 chr8 48043033 + Exonic hg38 PRAD TCGA-KK-A8IB-01A 3 9 In-Frame Intra-chr q11.21 Oncogene q11.21 Seq+ 99564 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSMAF-CLVS1 NSMAF chr8 58594232 - CLVS1 chr8 61458307 + Exonic hg38 PRAD TCGA-KK-A8IB-01A 1 3 Out-of-frame Intra-chr q12.1 q12.2 Seq+ 99565 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPATCH8-AS2 GPATCH8 chr17 44464472 - AS2 chr3 6894019 - Exonic hg38 PRAD TCGA-KK-A8IC-01A 53 100 Out-of-frame Inter-chr q21.31 99566 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53-FARP2 TP53 chr17 7687377 - FARP2 chr2 241373084 + Exonic hg38 PRAD TCGA-KK-A8IC-01A 10 29 5'UTR-5'UTR Inter-chr p13.1 Oncogene Tumor suppressor gene Transcription factor q37.3 Seq+ 99567 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBTD1-SYBU MBTD1 chr17 51206888 - SYBU chr8 109619039 - Exonic hg38 PRAD TCGA-KK-A8IC-01A 4 16 In-Frame Inter-chr q21.33 q23.2 Seq+ 99568 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRC2-PHYHIPL MRC2 chr17 62627920 + PHYHIPL chr10 59245057 + Exonic hg38 PRAD TCGA-KK-A8IC-01A 4 15 Out-of-frame Inter-chr q23.2 q21.1 Seq+ 99569 ChimerSeq TCGA FAWG TCGA_RNA-Seq OGT-POLA1 OGT chrX 71538072 + POLA1 chrX 24809898 + Exonic hg38 PRAD TCGA-KK-A8IC-01A 3 5 In-Frame Intra-chr q13.1 p22.11 Seq+ 99570 ChimerSeq TCGA FAWG TCGA_RNA-Seq LLGL2-CPNE4 LLGL2 chr17 75563463 + CPNE4 chr3 132040321 - Exonic hg38 PRAD TCGA-KK-A8IC-01A 1 12 CDS-5'UTR Inter-chr q25.1 q22.1 Seq+ 99571 ChimerSeq TCGA FAWG TCGA_RNA-Seq C19orf48-CCDC9 C19orf48 chr19 50802217 - CCDC9 chr19 47256523 + Exonic hg38 PRAD TCGA-KK-A8IC-01A 1 8 5'UTR-5'UTR Intra-chr q13.33 q13.32 99572 ChimerSeq TCGA FAWG TCGA_RNA-Seq SF3A2-AZU1 SF3A2 chr19 2243544 + AZU1 chr19 828230 + Exonic hg38 PRAD TCGA-KK-A8ID-01A 21 250 CDS-3'UTR Intra-chr p13.3 p13.3 Seq+ 99573 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDK1-CHST12 SDK1 chr7 3821583 + CHST12 chr7 2432563 + Exonic hg38 PRAD TCGA-KK-A8ID-01A 8 32 CDS-5'UTR Intra-chr p22.2 p22.3 Seq+ 99574 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUSD6-SMOC1 SUSD6 chr14 69658713 + SMOC1 chr14 69864162 + Exonic hg38 PRAD TCGA-KK-A8ID-01A 4 33 CDS-5'UTR Intra-chr q24.1 q24.2 99575 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAXC-ASCC3 FAXC chr6 99349107 - ASCC3 chr6 100540387 - Exonic hg38 PRAD TCGA-KK-A8ID-01A 6 13 Out-of-frame Intra-chr q16.2 q16.3 Seq+ 99576 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC7A1-RIDA SLC7A1 chr13 29530538 - RIDA chr8 98108751 - Exonic hg38 PRAD TCGA-KK-A8ID-01A 5 16 In-Frame Inter-chr q12.3 q22.2 99577 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC35C2-B4GALT5 SLC35C2 chr20 46364371 - B4GALT5 chr20 49656702 - Exonic hg38 PRAD TCGA-KK-A8ID-01A 8 3 5'UTR-CDS Intra-chr q13.12 q13.13 Seq+ 99578 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXP4-DNAH8 FOXP4 chr6 41546867 + DNAH8 chr6 38982346 + Exonic hg38 PRAD TCGA-KK-A8ID-01A 7 4 5'UTR-CDS Intra-chr p21.1 Oncogene Transcription factor p21.2 Seq+ 99579 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMC6-UACA TMC6 chr17 78122605 - UACA chr15 70678206 - Exonic hg38 PRAD TCGA-KK-A8ID-01A 5 11 In-Frame Inter-chr q25.3 q23 Seq+ 99580 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPTOR-IQCH RPTOR chr17 80855547 + IQCH chr15 67400114 + Exonic hg38 PRAD TCGA-KK-A8ID-01A 2 22 In-Frame Inter-chr q25.3 q23 Seq+ 99581 ChimerSeq TCGA FAWG TCGA_RNA-Seq RABEP1-MINK1 RABEP1 chr17 5378232 + MINK1 chr17 4878317 + Exonic hg38 PRAD TCGA-KK-A8ID-01A 3 16 In-Frame Intra-chr p13.2 p13.2 Seq+ 99582 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFCP2-RNF41 TFCP2 chr12 51172601 - RNF41 chr12 56216613 - Exonic hg38 PRAD TCGA-KK-A8ID-01A 3 10 5'UTR-5'UTR Intra-chr q13.13 Transcription factor q13.3 Seq+ 99583 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRYL1-GJA3 CRYL1 chr13 20432102 - GJA3 chr13 20143305 - Exonic hg38 PRAD TCGA-KK-A8ID-01A 2 11 CDS-5'UTR Intra-chr q12.11 q12.11 Seq+ 99584 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSPL2-CASC4 CTDSPL2 chr15 44427772 + CASC4 chr15 44289159 + Exonic hg38 PRAD TCGA-KK-A8ID-01A 1 14 5'UTR-5'UTR Intra-chr q15.3 q15.3 Seq+ 99585 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE9A-SLC37A1 PDE9A chr21 42754064 + SLC37A1 chr21 42502296 + Exonic hg38 PRAD TCGA-KK-A8ID-01A 3 6 CDS-5'UTR Intra-chr q22.3 q22.3 Seq+ 99586 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTK7-VEGFA PTK7 chr6 43076567 + VEGFA chr6 43774341 + Exonic hg38 PRAD TCGA-KK-A8ID-01A 2 9 Out-of-frame Intra-chr p21.1 p21.1 Tumor suppressor gene Seq+ 99587 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB7A-EEFSEC RAB7A chr3 128798069 + EEFSEC chr3 128408069 + Exonic hg38 PRAD TCGA-KK-A8ID-01A 3 4 CDS-3'UTR Intra-chr q21.3 Tumor suppressor gene q21.3 99588 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13B-RASL11A VPS13B chr8 99721047 + RASL11A chr13 27271484 + Exonic hg38 PRAD TCGA-KK-A8ID-01A 2 8 Out-of-frame Inter-chr q22.2 q12.2 Tumor suppressor gene Seq+ 99589 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRNIP-RNF130 MRNIP chr5 179841907 - RNF130 chr5 180013311 - Exonic hg38 PRAD TCGA-KK-A8ID-01A 2 7 5'UTR-CDS Intra-chr q35.3 99590 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIG1-C19orf48 LIG1 chr19 48149763 - C19orf48 chr19 50802257 - Exonic hg38 PRAD TCGA-KK-A8ID-01A 1 10 CDS-5'UTR Intra-chr q13.33 Tumor suppressor gene q13.33 99591 ChimerSeq TCGA FAWG TCGA_RNA-Seq BICD1-CCDC91 BICD1 chr12 32107544 + CCDC91 chr12 28450161 + Exonic hg38 PRAD TCGA-KK-A8ID-01A 1 6 In-Frame Intra-chr p11.21 p11.22 Seq+ 99592 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFT81-ACACB IFT81 chr12 110209216 + ACACB chr12 109187999 + Exonic hg38 PRAD TCGA-KK-A8ID-01A 1 5 CDS-3'UTR Intra-chr q24.11 q24.11 Seq+ 99593 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF532-NEDD4L ZNF532 chr18 58920633 + NEDD4L chr18 58165788 + Exonic hg38 PRAD TCGA-KK-A8ID-01A 1 5 In-Frame Intra-chr q21.32 Transcription factor q21.31 Tumor suppressor gene Seq+ 99594 ChimerSeq TCGA FAWG TCGA_RNA-Seq RILPL1-NCOR2 RILPL1 chr12 123523495 - NCOR2 chr12 124437996 - Exonic hg38 PRAD TCGA-KK-A8ID-01A 1 3 Out-of-frame Intra-chr q24.31 q24.31 99595 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTBN4-SIPA1L3 SPTBN4 chr19 40534343 + SIPA1L3 chr19 38182519 + Exonic hg38 PRAD TCGA-KK-A8ID-01A 1 2 Out-of-frame Intra-chr q13.2 q13.13 Seq+ 99596 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM160B1-TECTB FAM160B1 chr10 114833461 + TECTB chr10 112283735 + Exonic hg38 PRAD TCGA-KK-A8ID-01A 1000 1000 Out-of-frame Intra-chr q25.3 q25.2 99597 ChimerSeq TCGA FAWG TCGA_RNA-Seq GABRG3-NBPF22P GABRG3 chr15 27480787 + NBPF22P chr5 86282731 + Exonic hg38 PRAD TCGA-KK-A8IF-01A 7 10 CDS-5'UTR Inter-chr q12 q14.3 Seq+ 99598 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPD52L1-SAMD3 TPD52L1 chr6 125153970 + SAMD3 chr6 130313093 - Exonic hg38 PRAD TCGA-KK-A8IF-01A 2 13 CDS-5'UTR Intra-chr q22.31 q23.1 Seq+ 99599 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX10-OTUD4 DDX10 chr11 108706837 + OTUD4 chr4 145111128 - Exonic hg38 PRAD TCGA-KK-A8IF-01A 1 6 CDS-3'UTR Inter-chr q22.3 q31.21 99600 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD9-CASC16 CHD9 chr16 53288014 + CASC16 chr16 52591067 - Exonic hg38 PRAD TCGA-KK-A8IG-01A 3 12 CDS-3'UTR Intra-chr q12.2 q12.2 Seq+ 99601 ChimerSeq TCGA FAWG TCGA_RNA-Seq XRCC5-ACADL XRCC5 chr2 216194986 + ACADL chr2 210195338 - Exonic hg38 PRAD TCGA-KK-A8IH-01A 3 88 In-Frame Intra-chr q35 Tumor suppressor gene q34 Seq+ 99602 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUEDC1-ROPN1B CUEDC1 chr17 57955225 - ROPN1B chr3 125977004 + Exonic hg38 PRAD TCGA-KK-A8IH-01A 5 5 5'UTR-CDS Inter-chr q22 q21.2 99603 ChimerSeq TCGA FAWG TCGA_RNA-Seq HYDIN-PSMD11 HYDIN chr16 71018129 - PSMD11 chr17 32464049 + Exonic hg38 PRAD TCGA-KK-A8IH-01A 4 7 Out-of-frame Inter-chr q11.2 Seq+ 99604 ChimerSeq TCGA FAWG TCGA_RNA-Seq CIC-CD177 CIC chr19 42268594 + CD177 chr19 43353853 + Exonic hg38 PRAD TCGA-KK-A8IH-01A 3 9 5'UTR-CDS Intra-chr q13.2 Oncogene Tumor suppressor gene Transcription factor q13.31 Seq+ 99605 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANK3-USP9Y ANK3 chr10 60055658 - USP9Y chrY 12856340 + Exonic hg38 PRAD TCGA-KK-A8IH-01A 3 4 Out-of-frame Inter-chr q21.2 q11.221 Seq+ 99606 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADK-KCNMA1 ADK chr10 74224591 + KCNMA1 chr10 77019099 - Exonic hg38 PRAD TCGA-KK-A8IH-01A 1 6 In-Frame Intra-chr q22.2 q22.3 Seq+ 99607 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSK3A-ZNF564 GSK3A chr19 42239955 - ZNF564 chr19 12528696 - Exonic hg38 PRAD TCGA-KK-A8IH-01A 1 6 In-Frame Intra-chr q13.2 CMGC:GSK p13.2 Transcription factor Seq+ 99608 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTBN1-ECI2 SPTBN1 chr2 54599243 + ECI2 chr6 4133701 - Exonic hg38 PRAD TCGA-KK-A8II-01A 23 148 CDS-5'UTR Inter-chr p16.2 Tumor suppressor gene p25.2 Seq+ 99609 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAGI1-TBC1D30 MAGI1 chr3 66037996 - TBC1D30 chr12 64827835 + Exonic hg38 PRAD TCGA-KK-A8II-01A 3 20 In-Frame Inter-chr Oncogene q14.3 Seq+ 99610 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP32-CWF19L2 ARHGAP32 chr11 129062280 - CWF19L2 chr11 107455776 - Exonic hg38 PRAD TCGA-KK-A8II-01A 4 9 In-Frame Intra-chr q24.3 q22.3 Seq+ 99611 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL6A3-DDX3X COL6A3 chr2 237343576 - DDX3X chrX 41349901 + Exonic hg38 PRAD TCGA-KK-A8II-01A 5 5 Out-of-frame Inter-chr q37.3 p11.4 Tumor suppressor gene 99612 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP34-CAPN13 USP34 chr2 61283244 - CAPN13 chr2 30754364 - Exonic hg38 PRAD TCGA-KK-A8II-01A 1000 1000 Out-of-frame Intra-chr p15 p23.1 99613 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDS5B-CRYBB1 PDS5B chr13 32586593 + CRYBB1 chr22 26616338 - Exonic hg38 PRAD TCGA-KK-A8IJ-01A 33 124 5'UTR-5'UTR Inter-chr q13.1 Tumor suppressor gene q12.1 Seq+ 99614 ChimerSeq TCGA FAWG TCGA_RNA-Seq RB1CC1-PTPN3 RB1CC1 chr8 52668021 - PTPN3 chr9 109391561 - Exonic hg38 PRAD TCGA-KK-A8IJ-01A 11 51 In-Frame Inter-chr q11.23 Tumor suppressor gene q31.3 Seq+ 99615 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF292-PRSS54 ZNF292 chr6 87155759 + PRSS54 chr16 58284721 - Exonic hg38 PRAD TCGA-KK-A8IJ-01A 1 6 In-Frame Inter-chr q14.3 Tumor suppressor gene Transcription factor q21 Seq+ 99616 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDFY3-FOSL1 WDFY3 chr4 84932270 - FOSL1 chr11 65897006 - Exonic hg38 PRAD TCGA-KK-A8IJ-01A 1 2 5'UTR-CDS Inter-chr q21.23 q13.1 Transcription factor 99617 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A3-SKIL SLC45A3 chr1 205680394 - SKIL chr3 170359699 + Exonic hg38 PRAD TCGA-KK-A8IL-01A 5 68 5'UTR-5'UTR Inter-chr q32.1 q26.2 Tumor suppressor gene Transcription factor Seq+ 99618 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKT3-PPP2R2A AKT3 chr1 243843125 - PPP2R2A chr8 26354468 + Exonic hg38 PRAD TCGA-KK-A8IL-01A 3 23 5'UTR-CDS Inter-chr AGC:Akt Oncogene p21.2 Seq+ 99619 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEDD4L-MORC3 NEDD4L chr18 58165861 + MORC3 chr21 36356620 + Exonic hg38 PRAD TCGA-KK-A8IL-01A 5 7 In-Frame Inter-chr q21.31 Tumor suppressor gene q22.12 Seq+ 99620 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4K3-TMEM178A MAP4K3 chr2 39286852 - TMEM178A chr2 39707049 + Exonic hg38 PRAD TCGA-KK-A8IL-01A 2 8 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 99621 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSTN-MYO5C DSTN chr20 17570211 + MYO5C chr15 52261127 - Exonic hg38 PRAD TCGA-KK-A8IM-01A 2 27 In-Frame Inter-chr p12.1 q21.2 Seq+ 99622 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM68-ZNF821 TMEM68 chr8 55773269 - ZNF821 chr16 71880023 - Exonic hg38 PRAD TCGA-KK-A8IM-01A 5 11 5'UTR-5'UTR Inter-chr q12.1 q22.2 Transcription factor Seq+ 99623 ChimerSeq TCGA FAWG TCGA_RNA-Seq DERA-NT5DC1 DERA chr12 15911414 + NT5DC1 chr6 116221054 + Exonic hg38 PRAD TCGA-KK-A8IM-01A 1 6 In-Frame Inter-chr p12.3 q22.1 99624 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A3-ETV1 SLC45A3 chr1 205680394 - ETV1 chr7 13939246 - Exonic hg38 PRAD TCGA-M7-A71Y-01A 31 165 5'UTR-CDS Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 99625 ChimerSeq TCGA FAWG TCGA_RNA-Seq GDAP2-SLAIN1 GDAP2 chr1 117929448 - SLAIN1 chr13 77760828 + Exonic hg38 PRAD TCGA-M7-A71Y-01A 1 13 5'UTR-CDS Inter-chr p12 q22.3 Seq+ 99626 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF704-TPD52 ZNF704 chr8 80821374 - TPD52 chr8 80064593 - Exonic hg38 PRAD TCGA-M7-A71Y-01A 2 6 Out-of-frame Intra-chr q21.13 Transcription factor q21.13 Seq+ 99627 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHJ1-TCF3 PLEKHJ1 chr19 2235923 - TCF3 chr19 1622415 - Exonic hg38 PRAD TCGA-M7-A71Z-01A 10 83 In-Frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Transcription factor Seq+ 99628 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR6789-TCF3 MIR6789 chr19 2235923 - TCF3 chr19 1622415 - Exonic hg38 PRAD TCGA-M7-A71Z-01A 10 17 3'UTR-CDS Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Transcription factor 99629 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIOK3-ZNF521 RIOK3 chr18 23467526 + ZNF521 chr18 25345347 - Exonic hg38 PRAD TCGA-M7-A71Z-01A 4 7 5'UTR-5'UTR Intra-chr q11.2 Atypical:RIO q11.2 Oncogene Transcription factor Seq+ 99630 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAF8-SAMD5 SCAF8 chr6 154778045 + SAMD5 chr6 147564394 + Exonic hg38 PRAD TCGA-M7-A71Z-01A 1 5 In-Frame Intra-chr q25.2 q24.3 Seq+ 99631 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHJ1-TCF7L1 PLEKHJ1 chr19 2235923 - TCF7L1 chr19 1622415 - Exonic hg38 PRAD TCGA-M7-A71Z-01A 1000 1000 CDS-5'UTR Intra-chr p13.3 p11.2 Oncogene Transcription factor 99632 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREB1-SUCNR1 CREB1 chr2 207561160 + SUCNR1 chr3 151879852 + Exonic hg38 PRAD TCGA-M7-A720-01A 1 4 5'UTR-5'UTR Inter-chr q33.3 Oncogene Transcription factor q25.1 Seq+ 99633 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX23-NMNAT2 DDX23 chr12 48852084 - NMNAT2 chr1 183293793 - Exonic hg38 PRAD TCGA-M7-A720-01A 1 4 5'UTR-CDS Inter-chr q13.12 q25.3 Seq+ 99634 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRBP1-RPS16 NRBP1 chr2 27437360 + RPS16 chr19 39433761 - Exonic hg38 PRAD TCGA-M7-A720-01A 1 1 In-Frame Inter-chr p23.3 Other:NRBP Tumor suppressor gene q13.2 99635 ChimerSeq TCGA FAWG TCGA_RNA-Seq GULP1-TFPI GULP1 chr2 188529195 + TFPI chr2 187529485 - Exonic hg38 PRAD TCGA-M7-A724-01A 7 15 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 99636 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXW7-SETD7 FBXW7 chr4 152534941 - SETD7 chr4 139496521 - Exonic hg38 PRAD TCGA-M7-A724-01A 1 20 5'UTR-CDS Intra-chr q31.3 Oncogene Tumor suppressor gene q31.1 99637 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFATC3-SPATA33 NFATC3 chr16 68191775 + SPATA33 chr16 89669286 + Exonic hg38 PRAD TCGA-M7-A724-01A 4 7 In-Frame Intra-chr q22.1 Transcription factor q24.3 Seq+ 99638 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC15A4-TMEM132D SLC15A4 chr12 128814775 - TMEM132D chr12 129700698 - Exonic hg38 PRAD TCGA-M7-A724-01A 3 5 Out-of-frame Intra-chr q24.33 q24.33 Seq+ 99639 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL5-RAB28 FBXL5 chr4 15655204 - RAB28 chr4 13479526 - Exonic hg38 PRAD TCGA-M7-A724-01A 1000 1000 In-Frame Intra-chr p15.32 p15.33 Seq+ 99640 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ETV4 TMPRSS2 chr21 41508081 - ETV4 chr17 43545367 - Exonic hg38 PRAD TCGA-M7-A725-01A 193 298 5'UTR-5'UTR Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 99641 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1671-MYO18B KIAA1671 chr22 25112462 + MYO18B chr22 25921257 + Exonic hg38 PRAD TCGA-M7-A725-01A 36 93 Out-of-frame Intra-chr q11.23 q12.1 Tumor suppressor gene 99642 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFHX3-ZNF821 ZFHX3 chr16 72889731 - ZNF821 chr16 71868037 - Exonic hg38 PRAD TCGA-M7-A725-01A 13 73 In-Frame Intra-chr q22.3 Tumor suppressor gene Transcription factor q22.2 Transcription factor Seq+ 99643 ChimerSeq TCGA FAWG TCGA_RNA-Seq C21orf2-UMODL1 C21orf2 chr21 44339118 - UMODL1 chr21 42142096 + Exonic hg38 PRAD TCGA-M7-A725-01A 6 80 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 99644 ChimerSeq TCGA FAWG TCGA_RNA-Seq BBS4-CSNK1G1 BBS4 chr15 72735966 + CSNK1G1 chr15 64180454 - Exonic hg38 PRAD TCGA-M7-A725-01A 8 69 In-Frame Intra-chr q24.1 q22.31 Seq+ 99645 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC4A4-ARHGAP6 SLC4A4 chr4 71397653 + ARHGAP6 chrX 11254707 - Exonic hg38 PRAD TCGA-M7-A725-01A 9 20 In-Frame Inter-chr q13.3 p22.2 Seq+ 99646 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF170-CRYBB1 RNF170 chr8 42873931 - CRYBB1 chr22 26616338 - Exonic hg38 PRAD TCGA-M7-A725-01A 2 29 5'UTR-5'UTR Inter-chr p11.21 q12.1 Seq+ 99647 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBCK-WDHD1 TBCK chr4 106171095 - WDHD1 chr14 54967394 - Exonic hg38 PRAD TCGA-M7-A725-01A 4 3 Out-of-frame Inter-chr q24 Other:TBCK q22.3 Seq+ 99648 ChimerSeq TCGA FAWG TCGA_RNA-Seq TYW1B-BAZ1B TYW1B chr7 72694687 - BAZ1B chr7 73478569 - Exonic hg38 PRAD TCGA-M7-A725-01A 1 12 In-Frame Intra-chr q11.23 q11.23 Seq+ 99649 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPNS1-UPK1A CAPNS1 chr19 36146312 + UPK1A chr19 35677812 + Exonic hg38 PRAD TCGA-M7-A725-01A 1 10 Out-of-frame Intra-chr q13.12 q13.12 99650 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF12-DSCAM TCF12 chr15 57091891 + DSCAM chr21 40369245 - Exonic hg38 PRAD TCGA-M7-A725-01A 2 4 In-Frame Inter-chr q21.3 Oncogene Transcription factor q22.2 Seq+ 99651 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM5-CYB561D2 RBM5 chr3 50105709 + CYB561D2 chr3 50353241 + Exonic hg38 PRAD TCGA-MG-AAMC-01A 13 26 In-Frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene Seq+ 99652 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSD3-NEFL PSD3 chr8 19013563 - NEFL chr8 24954305 - Exonic hg38 PRAD TCGA-MG-AAMC-01A 9 13 In-Frame Intra-chr p22 p21.2 Seq+ 99653 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC20A2-FAAHP1 SLC20A2 chr8 42436989 - FAAHP1 chr1 46482210 + Exonic hg38 PRAD TCGA-QU-A6IN-01A 20 72 CDS-3'UTR Inter-chr p11.21 p33 99654 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMPR1B-ETV1 BMPR1B chr4 94758068 + ETV1 chr7 13989139 - Exonic hg38 PRAD TCGA-SU-A7E7-01A 16 34 3'UTR-3'UTR Inter-chr q22.3 TKL:STKR p21.2 Oncogene Transcription factor Seq+ 99655 ChimerSeq TCGA FAWG TCGA_RNA-Seq NBPF26-RASSF5 NBPF26 chr1 120724250 + RASSF5 chr1 206538172 + Exonic hg38 PRAD TCGA-SU-A7E7-01A 7 14 5'UTR-CDS Intra-chr p11.2 q32.1 Tumor suppressor gene 99656 ChimerSeq TCGA FAWG TCGA_RNA-Seq FASN-NUCKS1 FASN chr17 82080931 - NUCKS1 chr1 205718005 - Exonic hg38 PRAD TCGA-TK-A8OK-01A 7 29 Out-of-frame Inter-chr q25.3 q32.1 Seq+ 99657 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFF4-SNTG2 AFF4 chr5 132892164 - SNTG2 chr2 1209103 + Exonic hg38 PRAD TCGA-TK-A8OK-01A 7 23 CDS-3'UTR Inter-chr q31.1 Seq+ 99658 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX9-PRELID1 DHX9 chr1 182881647 + PRELID1 chr5 177306422 + Exonic hg38 PRAD TCGA-TK-A8OK-01A 2 42 5'UTR-CDS Inter-chr q25.3 q35.3 Seq+ 99659 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPTXR-GTPBP1 NPTXR chr22 38823083 - GTPBP1 chr22 38708845 + Exonic hg38 PRAD TCGA-TK-A8OK-01A 3 6 In-Frame Intra-chr q13.1 q13.1 Seq+ 99660 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPATCH8-COMTD1 GPATCH8 chr17 44503326 - COMTD1 chr10 75234743 - Exonic hg38 PRAD TCGA-TK-A8OK-01A 1 11 Out-of-frame Inter-chr q21.31 q22.2 Seq+ 99661 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASP7-LRRC27 CASP7 chr10 113679978 + LRRC27 chr10 132351607 + Exonic hg38 PRAD TCGA-TP-A8TT-01A 20 36 In-Frame Intra-chr q25.3 q26.3 Seq+ 99662 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCSER1-WDFY3 CCSER1 chr4 90127831 + WDFY3 chr4 84775138 - Exonic hg38 PRAD TCGA-TP-A8TT-01A 3 8 5'UTR-CDS Intra-chr q22.1 q21.23 Seq+ 99663 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK1-GANC DOCK1 chr10 127127764 + GANC chr15 42329306 + Exonic hg38 PRAD TCGA-TP-A8TT-01A 1 11 In-Frame Inter-chr q26.2 q15.1 Seq+ 99664 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSI2-SMYD3 MSI2 chr17 57529724 + SMYD3 chr1 246355094 - Exonic hg38 PRAD TCGA-TP-A8TT-01A 1 5 Out-of-frame Inter-chr q22 q44 Transcription factor Seq+ 99665 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNHG14-FUNDC1 SNHG14 chr15 25267044 + FUNDC1 chrX 44527365 - Exonic hg38 PRAD TCGA-TP-A8TT-01A 1 5 5'UTR-CDS Inter-chr q11.2 p11.3 99666 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMIM13-TM6SF1 SMIM13 chr6 11094389 + TM6SF1 chr15 83112797 + Exonic hg38 PRAD TCGA-TP-A8TT-01A 1 4 Out-of-frame Inter-chr p24.2 q25.2 99667 ChimerSeq TCGA FAWG TCGA_RNA-Seq COA1-AMPH COA1 chr7 43729429 - AMPH chr7 38535011 - Exonic hg38 PRAD TCGA-TP-A8TV-01A 10 36 5'UTR-CDS Intra-chr p13 p14.1 Seq+ 99668 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1B-MTA3 PPM1B chr2 44169274 + MTA3 chr2 42753374 + Exonic hg38 PRAD TCGA-TP-A8TV-01A 5 8 5'UTR-CDS Intra-chr p21 p21 Seq+ 99669 ChimerSeq TCGA FAWG TCGA_RNA-Seq POU2F1-FMO1 POU2F1 chr1 167383951 + FMO1 chr1 171258082 + Exonic hg38 PRAD TCGA-TP-A8TV-01A 1 4 5'UTR-5'UTR Intra-chr q24.2 Transcription factor q24.3 Seq+ 99670 ChimerSeq TCGA FAWG TCGA_RNA-Seq IMPA1-RSPO2 IMPA1 chr8 81686252 - RSPO2 chr8 108082807 - Exonic hg38 PRAD TCGA-TP-A8TV-01A 1 3 5'UTR-5'UTR Intra-chr q21.13 q23.1 Seq+ 99671 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLCO5A1-CASC9 SLCO5A1 chr8 69738040 - CASC9 chr8 75224358 - Exonic hg38 PRAD TCGA-V1-A8MF-01A 3 8 CDS-3'UTR Intra-chr q13.3 q21.13 Seq+ 99672 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCAPG2-ERGIC1 NCAPG2 chr7 158692842 - ERGIC1 chr5 172935188 + Exonic hg38 PRAD TCGA-V1-A8MF-01A 1 4 Out-of-frame Inter-chr q36.3 q35.1 99673 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGAPA1-FOXA1 RALGAPA1 chr14 35808730 - FOXA1 chr14 37592711 - Exonic hg38 PRAD TCGA-V1-A8MF-01A 1 2 Out-of-frame Intra-chr q13.2 q21.1 Tumor suppressor gene Transcription factor 99674 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX39B-PPP1R18 DDX39B chr6 31538763 - PPP1R18 chr6 30679389 - Exonic hg38 PRAD TCGA-V1-A8MG-01A 11 36 5'UTR-5'UTR Intra-chr p21.33 Seq+ 99675 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCTD20-STK38 KCTD20 chr6 36470257 + STK38 chr6 36525642 - Exonic hg38 PRAD TCGA-V1-A8MG-01A 4 8 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 99676 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXN3-KCNQ1 FOXN3 chr14 89280950 - KCNQ1 chr11 2768844 + Exonic hg38 PRAD TCGA-V1-A8MG-01A 1 8 CDS-3'UTR Inter-chr q32.11 Transcription factor p15.5 Seq+ 99677 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLPP1-SMN1 PLPP1 chr5 55534572 - SMN1 chr5 70951941 + Exonic hg38 PRAD TCGA-V1-A8MJ-01A 16 6 3'UTR-3'UTR Intra-chr q11.2 99678 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4K3-SRGAP2 MAP4K3 chr2 39436892 - SRGAP2 chr1 206384014 + Exonic hg38 PRAD TCGA-V1-A8MJ-01A 2 5 In-Frame Inter-chr p22.1 q32.1 Tumor suppressor gene Seq+ 99679 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205680394 - ERG chr21 38445621 - Exonic hg38 PRAD TCGA-V1-A8MJ-01A 1 1 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 99680 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACACA-MMP28 ACACA chr17 37097830 - MMP28 chr17 35779323 - Exonic hg38 PRAD TCGA-V1-A8ML-01A 4 23 5'UTR-5'UTR Intra-chr q12 Seq+ 99681 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA4-ARHGAP44 NCOA4 chr10 46030526 - ARHGAP44 chr17 12958717 + Exonic hg38 PRAD TCGA-V1-A8ML-01A 1 13 5'UTR-5'UTR Inter-chr q11.22 Oncogene Tumor suppressor gene p12 Seq+ 99682 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP44-C17orf78 ARHGAP44 chr17 12958897 + C17orf78 chr17 37389246 + Exonic hg38 PRAD TCGA-V1-A8ML-01A 1 11 CDS-3'UTR Intra-chr p12 Seq+ 99683 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP22-RNF167 USP22 chr17 21042665 - RNF167 chr17 4944558 + Exonic hg38 PRAD TCGA-V1-A8ML-01A 1 6 Out-of-frame Intra-chr p11.2 p13.2 Seq+ 99684 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEDD4L-DCLK2 NEDD4L chr18 58373269 + DCLK2 chr4 150102478 + Exonic hg38 PRAD TCGA-V1-A8MM-01A 1 6 Out-of-frame Inter-chr q21.31 Tumor suppressor gene q31.23 CAMK:DCAMKL 99685 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIEZO1-MNS1 PIEZO1 chr16 88784901 - MNS1 chr15 56464247 - Exonic hg38 PRAD TCGA-V1-A8WL-01A 18 24 Out-of-frame Inter-chr q24.3 q21.3 Seq+ 99686 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO34-ATG7 FBXO34 chr14 55271537 + ATG7 chr3 11554811 + Exonic hg38 PRAD TCGA-V1-A8WL-01A 10 10 5'UTR-CDS Inter-chr q22.3 p25.3 Seq+ 99687 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASSF3-GYS2 RASSF3 chr12 64610743 + GYS2 chr12 21576057 - Exonic hg38 PRAD TCGA-V1-A8WL-01A 1 7 In-Frame Intra-chr q14.2 Tumor suppressor gene p12.1 Seq+ 99688 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1orf132-TSC22D3 C1orf132 chr1 207815929 - TSC22D3 chrX 107715950 - Exonic hg38 PRAD TCGA-V1-A8WN-01A 80 177 Out-of-frame Inter-chr q32.2 q22.3 Seq+ 99689 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERF2-GPN2 SERF2 chr15 43799107 + GPN2 chr1 26884290 - Exonic hg38 PRAD TCGA-V1-A8WN-01A 2 27 3'UTR-CDS Inter-chr q15.3 p36.11 Seq+ 99690 ChimerSeq TCGA FAWG TCGA_RNA-Seq MMP11-GAS2L1 MMP11 chr22 23772978 + GAS2L1 chr22 29310439 + Exonic hg38 PRAD TCGA-V1-A8WN-01A 2 6 3'UTR-CDS Intra-chr q11.23 q12.2 Seq+ 99691 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHTF8-TBC1D22A CHTF8 chr16 69132089 - TBC1D22A chr22 47173498 + Exonic hg38 PRAD TCGA-V1-A8WS-01A 35 46 5'UTR-5'UTR Inter-chr q22.1 q13.31 Seq+ 99692 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-INPP4B TMPRSS2 chr21 41508081 - INPP4B chr4 142270774 - Exonic hg38 PRAD TCGA-V1-A8WS-01A 29 54 5'UTR-CDS Inter-chr q22.3 q31.21 Tumor suppressor gene Seq+ 99693 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2D3-GSTCD UBE2D3 chr4 102826485 - GSTCD chr4 105822954 + Exonic hg38 PRAD TCGA-V1-A8WS-01A 22 79 Out-of-frame Intra-chr q24 q24 Seq+ 99694 ChimerSeq TCGA FAWG TCGA_RNA-Seq HERC2-TMEM145 HERC2 chr15 28299402 - TMEM145 chr19 42314272 + Exonic hg38 PRAD TCGA-V1-A8WS-01A 12 12 5'UTR-CDS Inter-chr q13.2 Seq+ 99695 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELP5-ZNF614 ELP5 chr17 7257038 + ZNF614 chr19 52013246 - Exonic hg38 PRAD TCGA-V1-A8WS-01A 4 38 CDS-3'UTR Inter-chr p13.1 q13.41 Transcription factor Seq+ 99696 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERG-TMPRSS2 ERG chr21 38575662 - TMPRSS2 chr21 41480602 - Exonic hg38 PRAD TCGA-V1-A8WS-01A 5 6 Out-of-frame Intra-chr q22.2 Oncogene Transcription factor q22.3 Seq+ 99697 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYM-KATNAL2 DYM chr18 49363161 - KATNAL2 chr18 47052880 + Exonic hg38 PRAD TCGA-V1-A8WS-01A 2 10 In-Frame Intra-chr q21.1 q21.1 Seq+ 99698 ChimerSeq TCGA FAWG TCGA_RNA-Seq BORCS5-HDAC7 BORCS5 chr12 12357509 + HDAC7 chr12 47792004 - Exonic hg38 PRAD TCGA-V1-A8WS-01A 1 12 3'UTR-CDS Intra-chr q13.11 99699 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF12-TTC23 TCF12 chr15 56921098 + TTC23 chr15 99221864 - Exonic hg38 PRAD TCGA-V1-A8WS-01A 3 4 Out-of-frame Intra-chr q21.3 Oncogene Transcription factor q26.3 Seq+ 99700 ChimerSeq TCGA FAWG TCGA_RNA-Seq ECI1-CDKN3 ECI1 chr16 2251316 - CDKN3 chr14 54401524 + Exonic hg38 PRAD TCGA-V1-A8WS-01A 3 3 Out-of-frame Inter-chr p13.3 q22.2 Seq+ 99701 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNRF3-DCAF11 ZNRF3 chr22 28884066 + DCAF11 chr14 24117266 + Exonic hg38 PRAD TCGA-V1-A8WS-01A 1 7 CDS-3'UTR Inter-chr q12.1 q12 99702 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTR3-ZRANB3 ACTR3 chr2 113942359 + ZRANB3 chr2 135230927 - Exonic hg38 PRAD TCGA-V1-A8WS-01A 1 6 In-Frame Intra-chr q14.1 q21.3 99703 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2AK1-MAP2K5 EIF2AK1 chr7 6037424 - MAP2K5 chr15 67806646 + Exonic hg38 PRAD TCGA-V1-A8WV-01A 8 21 In-Frame Inter-chr p22.1 q23 STE:STE7 Seq+ 99704 ChimerSeq TCGA FAWG TCGA_RNA-Seq BEND7-FRMD4A BEND7 chr10 13499739 - FRMD4A chr10 13858912 - Exonic hg38 PRAD TCGA-V1-A8WV-01A 5 5 Out-of-frame Intra-chr p13 p13 Seq+ 99705 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL3-MYCBP2 FBXL3 chr13 77015409 - MYCBP2 chr13 77051162 - Exonic hg38 PRAD TCGA-V1-A8WV-01A 2 16 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 99706 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC10-MORN5 HDAC10 chr22 50246679 - MORN5 chr9 122199885 + Exonic hg38 PRAD TCGA-V1-A8WV-01A 1 7 Out-of-frame Inter-chr q13.33 q33.2 Seq+ 99707 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK12-MORN5 MAPK12 chr22 50246679 - MORN5 chr9 122199885 + Exonic hg38 PRAD TCGA-V1-A8WV-01A 1 7 3'UTR-3'UTR Inter-chr q13.33 q33.2 99708 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDRG1-ERG NDRG1 chr8 133280231 - ERG chr21 38445620 - Exonic hg38 PRAD TCGA-V1-A8WW-01A 50 160 Out-of-frame Inter-chr q24.22 Tumor suppressor gene q22.2 Oncogene Transcription factor KB Pub Seq+ 99709 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR2L-TSPAN4 POLR2L chr11 842414 - TSPAN4 chr11 847201 + Exonic hg38 PRAD TCGA-V1-A8WW-01A 1 6 CDS-5'UTR Intra-chr p15.5 p15.5 99710 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRRM2-SNRPE SRRM2 chr16 2760499 + SNRPE chr1 203869877 + Exonic hg38 PRAD TCGA-V1-A8X3-01A 10 39 Out-of-frame Inter-chr p13.3 q32.1 Seq+ 99711 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPATS2-PPM1H SPATS2 chr12 49461037 + PPM1H chr12 62832279 - Exonic hg38 PRAD TCGA-V1-A8X3-01A 3 7 Out-of-frame Intra-chr q13.12 q14.2 Seq+ 99712 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA2022-PBDC1 KIAA2022 chrX 74924883 - PBDC1 chrX 76172950 + Exonic hg38 PRAD TCGA-V1-A9O5-01A 4 12 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 99713 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP70-TNFSF10 CEP70 chr3 138498031 - TNFSF10 chr3 172509321 - Exonic hg38 PRAD TCGA-V1-A9O5-01A 2 11 In-Frame Intra-chr q22.3 q26.31 Seq+ 99714 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACPP-ATP2C1 ACPP chr3 132317576 + ATP2C1 chr3 130930416 + Exonic hg38 PRAD TCGA-V1-A9O9-01A 69 338 In-Frame Intra-chr q22.1 q22.1 Seq+ 99715 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC30A4-VPS53 SLC30A4 chr15 45521964 - VPS53 chr17 661895 - Exonic hg38 PRAD TCGA-V1-A9O9-01A 29 121 CDS-5'UTR Inter-chr q21.1 Tumor suppressor gene Seq+ 99716 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMTC3-ACSS3 TMTC3 chr12 88142487 + ACSS3 chr12 81253307 + Exonic hg38 PRAD TCGA-V1-A9O9-01A 16 37 5'UTR-CDS Intra-chr q21.32 q21.31 Seq+ 99717 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSFP1-NMT1 NSFP1 chr17 46372866 + NMT1 chr17 45099405 + Exonic hg38 PRAD TCGA-V1-A9O9-01A 14 3 3'UTR-CDS Intra-chr q21.31 99718 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF13B-CSGALNACT1 KIF13B chr8 29108139 - CSGALNACT1 chr8 19408694 - Exonic hg38 PRAD TCGA-V1-A9O9-01A 7 23 In-Frame Intra-chr p12 p21.3 Seq+ 99719 ChimerSeq TCGA FAWG TCGA_RNA-Seq BLOC1S6-SCMH1 BLOC1S6 chr15 45592276 + SCMH1 chr1 41048890 - Exonic hg38 PRAD TCGA-V1-A9O9-01A 6 22 Out-of-frame Inter-chr q21.1 p34.2 Transcription factor Seq+ 99720 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGN2P46-EBNA1BP2 HMGN2P46 chr15 45536209 + EBNA1BP2 chr1 43175045 - Exonic hg38 PRAD TCGA-V1-A9O9-01A 3 33 5'UTR-5'UTR Inter-chr q21.1 p34.2 Seq+ 99721 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAF8-GREB1 SCAF8 chr6 154827240 + GREB1 chr2 11629948 + Exonic hg38 PRAD TCGA-V1-A9O9-01A 8 9 Out-of-frame Inter-chr q25.2 p25.1 Seq+ 99722 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCMH1-SQRDL SCMH1 chr1 41070595 - SQRDL chr15 45658907 + Exonic hg38 PRAD TCGA-V1-A9O9-01A 4 20 Out-of-frame Inter-chr p34.2 Transcription factor Seq+ 99723 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOT1L-LSM7 DOT1L chr19 2180756 + LSM7 chr19 2328477 - Exonic hg38 PRAD TCGA-V1-A9O9-01A 3 15 Out-of-frame Intra-chr p13.3 Oncogene Transcription factor p13.3 Seq+ 99724 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2C1-CPNE4 ATP2C1 chr3 130956179 + CPNE4 chr3 132040321 - Exonic hg38 PRAD TCGA-V1-A9O9-01A 2 12 CDS-5'UTR Intra-chr q22.1 q22.1 Seq+ 99725 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGN2P46-VPS53 HMGN2P46 chr15 45512449 + VPS53 chr17 661895 - Exonic hg38 PRAD TCGA-V1-A9O9-01A 2 9 5'UTR-5'UTR Inter-chr q21.1 Tumor suppressor gene 99726 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPO5-KIF6 XPO5 chr6 43573480 - KIF6 chr6 39346526 - Exonic hg38 PRAD TCGA-V1-A9O9-01A 1 7 In-Frame Intra-chr p21.1 Tumor suppressor gene p21.2 Seq+ 99727 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAGLA-INCENP DAGLA chr11 61723572 + INCENP chr11 62150057 + Exonic hg38 PRAD TCGA-V1-A9O9-01A 1 3 Out-of-frame Intra-chr q12.2 q12.3 99728 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF121-VASP RNF121 chr11 71957264 + VASP chr19 45517663 + Exonic hg38 PRAD TCGA-V1-A9OA-01A 1 15 In-Frame Inter-chr q13.4 q13.32 Seq+ 99729 ChimerSeq TCGA FAWG TCGA_RNA-Seq HTT-WDR19 HTT chr4 3189093 + WDR19 chr4 39255848 + Exonic hg38 PRAD TCGA-V1-A9OL-01A 29 85 In-Frame Intra-chr p16.3 p14 Seq+ 99730 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM110B-PREX2 FAM110B chr8 57994806 + PREX2 chr8 68191722 + Exonic hg38 PRAD TCGA-V1-A9OL-01A 15 34 5'UTR-CDS Intra-chr q12.1 q13.2 Seq+ 99731 ChimerSeq TCGA FAWG TCGA_RNA-Seq PREX2-FAM110B PREX2 chr8 68192525 + FAM110B chr8 58189318 + Exonic hg38 PRAD TCGA-V1-A9OL-01A 9 35 CDS-3'UTR Intra-chr q13.2 q12.1 Seq+ 99732 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCP1A-HYAL3 DCP1A chr3 53285476 - HYAL3 chr3 50295362 - Exonic hg38 PRAD TCGA-V1-A9OL-01A 7 15 Out-of-frame Intra-chr p21.1 p21.31 Seq+ 99733 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEMP1-SMARCC2 NEMP1 chr12 57063119 - SMARCC2 chr12 56174764 - Exonic hg38 PRAD TCGA-V1-A9OL-01A 2 30 In-Frame Intra-chr q13.3 q13.2 99734 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAB1-ITGB3BP DAB1 chr1 58506060 - ITGB3BP chr1 63454968 - Exonic hg38 PRAD TCGA-V1-A9OL-01A 2 14 5'UTR-CDS Intra-chr p32.1 p31.3 Seq+ 99735 ChimerSeq TCGA FAWG TCGA_RNA-Seq OMA1-ITGB3BP OMA1 chr1 58506060 - ITGB3BP chr1 63454968 - Exonic hg38 PRAD TCGA-V1-A9OL-01A 2 14 Out-of-frame Intra-chr p32.1 p31.3 Seq+ 99736 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGB3BP-TTC39A ITGB3BP chr1 63478764 - TTC39A chr1 51294511 - Exonic hg38 PRAD TCGA-V1-A9OL-01A 2 8 In-Frame Intra-chr p31.3 p32.3 Seq+ 99737 ChimerSeq TCGA FAWG TCGA_RNA-Seq MALAT1-SPZ1 MALAT1 chr11 65500814 + SPZ1 chr5 80320137 + Exonic hg38 PRAD TCGA-V1-A9OT-01A 3 41 Out-of-frame Inter-chr q13.1 q14.1 Transcription factor Seq+ 99738 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRHL2-ERG GRHL2 chr8 101558812 + ERG chr21 38423561 - Exonic hg38 PRAD TCGA-V1-A9OT-01A 1 6 Out-of-frame Inter-chr q22.3 Transcription factor q22.2 Oncogene Transcription factor Seq+ 99739 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK6-SF3A1 DOCK6 chr19 11253639 - SF3A1 chr22 30346519 - Exonic hg38 PRAD TCGA-V1-A9OT-01A 1 2 Out-of-frame Inter-chr p13.2 q12.2 99740 ChimerSeq TCGA FAWG TCGA_RNA-Seq GULP1-KCNJ13 GULP1 chr2 188483492 + KCNJ13 chr2 232771378 - Exonic hg38 PRAD TCGA-V1-A9OY-01A 2 5 5'UTR-5'UTR Intra-chr q32.1 q37.1 Seq+ 99741 ChimerSeq TCGA FAWG TCGA_RNA-Seq RB1CC1-ST18 RB1CC1 chr8 52714075 - ST18 chr8 52230077 - Exonic hg38 PRAD TCGA-V1-A9Z7-01A 5 34 5'UTR-5'UTR Intra-chr q11.23 Tumor suppressor gene q11.23 Transcription factor Seq+ 99742 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIAPH2-MAGEA11 DIAPH2 chrX 96738762 + MAGEA11 chrX 149688838 + Exonic hg38 PRAD TCGA-V1-A9Z7-01A 1 5 CDS-5'UTR Intra-chr q21.33 q28 Seq+ 99743 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUDT4-ATAD5 NUDT4 chr12 93381031 + ATAD5 chr17 30860433 + Exonic hg38 PRAD TCGA-V1-A9Z8-01A 2 10 5'UTR-CDS Inter-chr q22 q11.2 Seq+ 99744 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT3-TTC21B GALNT3 chr2 165794015 - TTC21B chr2 165901910 - Exonic hg38 PRAD TCGA-V1-A9Z8-01A 2 5 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 99745 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH2D4A-AP3M2 SH2D4A chr8 19313823 + AP3M2 chr8 42157941 + Exonic hg38 PRAD TCGA-V1-A9Z8-01A 2 3 Out-of-frame Intra-chr p21.3 p11.21 Seq+ 99746 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCP2-NCAM1 SCP2 chr1 52927465 + NCAM1 chr11 113255874 + Exonic hg38 PRAD TCGA-V1-A9ZG-01A 2 7 Out-of-frame Inter-chr p32.3 q23.2 Seq+ 99747 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBB3-TRPM5 TUBB3 chr16 89923458 + TRPM5 chr11 2418591 - Exonic hg38 PRAD TCGA-V1-A9ZI-01A 3 15 Out-of-frame Inter-chr q24.3 p15.5 Seq+ 99748 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOR1-TFDP2 NCOR1 chr17 16057514 - TFDP2 chr3 141974191 - Exonic hg38 PRAD TCGA-V1-A9ZI-01A 4 2 Out-of-frame Inter-chr p11.2 Oncogene q23 Transcription factor Seq+ 99749 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUL2-CYP2C18 CUL2 chr10 35090430 - CYP2C18 chr10 94687770 + Exonic hg38 PRAD TCGA-V1-A9ZK-01A 5 13 5'UTR-CDS Intra-chr p11.21 Tumor suppressor gene q23.33 Seq+ 99750 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXP2-ENKUR FOXP2 chr7 114366640 + ENKUR chr10 24999546 - Exonic hg38 PRAD TCGA-V1-A9ZK-01A 2 7 5'UTR-CDS Inter-chr q31.1 Transcription factor p12.1 Seq+ 99751 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAP1GDS1-H2AFZ RAP1GDS1 chr4 98293515 + H2AFZ chr4 99949740 - Exonic hg38 PRAD TCGA-V1-A9ZK-01A 2 1 Out-of-frame Intra-chr q23 q23 Seq+ 99752 ChimerSeq TCGA FAWG TCGA_RNA-Seq GABARAP-NUP205 GABARAP chr17 7240398 - NUP205 chr7 135648325 + Exonic hg38 PRAD TCGA-V1-A9ZR-01A 35 157 Out-of-frame Inter-chr p13.1 Tumor suppressor gene q33 Seq+ 99753 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLTC-ETV4 CLTC chr17 59666977 + ETV4 chr17 43536479 - Exonic hg38 PRAD TCGA-V1-A9ZR-01A 9 30 In-Frame Intra-chr q23.1 q21.31 Oncogene Transcription factor Seq+ 99754 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP205-DVL2 NUP205 chr7 135646231 + DVL2 chr17 7230155 - Exonic hg38 PRAD TCGA-V1-A9ZR-01A 5 6 Out-of-frame Inter-chr q33 p13.1 Seq+ 99755 ChimerSeq TCGA FAWG TCGA_RNA-Seq C16orf62-CDR2 C16orf62 chr16 19610415 + CDR2 chr16 22349849 - Exonic hg38 PRAD TCGA-V1-A9ZR-01A 5 5 Out-of-frame Intra-chr p12.3 p12.2 Seq+ 99756 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSME3-TM9SF2 PSME3 chr17 42839380 + TM9SF2 chr13 99562691 + Exonic hg38 PRAD TCGA-V1-A9ZR-01A 1 16 Out-of-frame Inter-chr q21.31 q32.3 99757 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF4-RGS12 RNF4 chr4 2500738 + RGS12 chr4 3378170 + Exonic hg38 PRAD TCGA-V1-A9ZR-01A 1 9 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 99758 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCD4-ELMSAN1 ABCD4 chr14 74292551 - ELMSAN1 chr14 73722847 - Exonic hg38 PRAD TCGA-V1-A9ZR-01A 2 4 Out-of-frame Intra-chr q24.3 q24.3 99759 ChimerSeq TCGA FAWG TCGA_RNA-Seq EP400-WHAMM EP400 chr12 131994956 + WHAMM chr15 82819323 + Exonic hg38 PRAD TCGA-V1-A9ZR-01A 2 3 Out-of-frame Inter-chr q24.33 Oncogene q25.2 99760 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNNA1-COTL1 CTNNA1 chr5 138783372 + COTL1 chr16 84566955 - Exonic hg38 PRAD TCGA-V1-A9ZR-01A 1 5 Out-of-frame Inter-chr q31.2 Oncogene q24.1 Seq+ 99761 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP85-IL34 NUP85 chr17 75226157 + IL34 chr16 70646548 + Exonic hg38 PRAD TCGA-V1-A9ZR-01A 1 4 CDS-5'UTR Inter-chr q25.1 q22.1 Seq+ 99762 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK7-RIN3 CDK7 chr5 69235453 + RIN3 chr14 92641238 + Exonic hg38 PRAD TCGA-VN-A88K-01A 9 33 3'UTR-CDS Inter-chr CMGC:CDK q32.12 Seq+ 99763 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLPP1-SREK1IP1 PLPP1 chr5 55534572 - SREK1IP1 chr5 64754362 - Exonic hg38 PRAD TCGA-VN-A88K-01A 1 8 In-Frame Intra-chr q11.2 q12.3 99764 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERG-RPS18 ERG chr21 38575662 - RPS18 chr6 33272628 + Exonic hg38 PRAD TCGA-VN-A88L-01A 21 60 3'UTR-3'UTR Inter-chr q22.2 Oncogene Transcription factor Seq+ 99765 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLD-SCEL DLD chr7 107891289 + SCEL chr13 77597545 + Exonic hg38 PRAD TCGA-VN-A88L-01A 12 85 Out-of-frame Inter-chr q31.1 q22.3 Seq+ 99766 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF5B-HHAT KIF5B chr10 32048464 - HHAT chr1 210464505 + Exonic hg38 PRAD TCGA-VN-A88L-01A 4 32 CDS-3'UTR Inter-chr p11.22 Seq+ 99767 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHROOM3-NNMT SHROOM3 chr4 76689702 + NNMT chr11 114297951 + Exonic hg38 PRAD TCGA-VN-A88L-01A 3 19 Out-of-frame Inter-chr q21.1 q23.2 Seq+ 99768 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC5-PPY HDAC5 chr17 44110729 - PPY chr17 43941214 - Exonic hg38 PRAD TCGA-VN-A88L-01A 1 5 Out-of-frame Intra-chr q21.31 q21.31 99769 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIPK2-MYCBP2 HIPK2 chr7 139715932 - MYCBP2 chr13 77158109 - Exonic hg38 PRAD TCGA-VN-A88L-01A 1 3 Out-of-frame Inter-chr q34 CMGC:DYRK Tumor suppressor gene q22.3 Seq+ 99770 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWTR1-ATR WWTR1 chr3 149656876 - ATR chr3 142449602 - Exonic hg38 PRAD TCGA-VN-A88M-01A 29 116 Out-of-frame Intra-chr q25.1 q23 Atypical:PIKK Oncogene Tumor suppressor gene Seq+ 99771 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRBA-HFE2 LRBA chr4 150735258 - HFE2 chr1 146019734 - Exonic hg38 PRAD TCGA-VN-A88N-01A 4 13 Out-of-frame Inter-chr q31.3 q21.1 Seq+ 99772 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD1-LIX1 CHD1 chr5 98926334 - LIX1 chr5 97124629 - Exonic hg38 PRAD TCGA-VN-A88O-01A 2 1 Out-of-frame Intra-chr q21.1 Tumor suppressor gene q15 99773 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF148-MYLK ZNF148 chr3 125323309 - MYLK chr3 123793844 - Exonic hg38 PRAD TCGA-VN-A88P-01A 4 3 5'UTR-5'UTR Intra-chr q21.2 Transcription factor q21.1 Seq+ 99774 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R12A-IMMT PPP1R12A chr12 79934695 - IMMT chr2 86181372 - Exonic hg38 PRAD TCGA-VN-A88P-01A 3 3 In-Frame Inter-chr q21.31 p11.2 Seq+ 99775 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFHX3-PMFBP1 ZFHX3 chr16 72950469 - PMFBP1 chr16 72140582 - Exonic hg38 PRAD TCGA-VN-A88R-01A 1 10 In-Frame Intra-chr q22.3 Tumor suppressor gene Transcription factor q22.2 Seq+ 99776 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3CB-CEP70 PIK3CB chr3 138733361 - CEP70 chr3 138508544 - Exonic hg38 PRAD TCGA-VN-A88R-01A 1 7 Out-of-frame Intra-chr q22.3 Oncogene q22.3 99777 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSK3B-CD80 GSK3B chr3 120002046 - CD80 chr3 119537418 - Exonic hg38 PRAD TCGA-VN-A88R-01A 1 3 Out-of-frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q13.33 99778 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT7-GAB1 GALNT7 chr4 173168961 + GAB1 chr4 143415477 + Exonic hg38 PRAD TCGA-VN-A943-01A 8 8 In-Frame Intra-chr q34.1 q31.21 Seq+ 99779 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF3-USH2A ATF3 chr1 212618234 + USH2A chr1 215838103 - Exonic hg38 PRAD TCGA-VN-A943-01A 4 5 In-Frame Intra-chr q32.3 Tumor suppressor gene Transcription factor q41 Seq+ 99780 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARP8-ELL2 PARP8 chr5 50668125 + ELL2 chr5 95943049 - Exonic hg38 PRAD TCGA-VN-A943-01A 3 9 Out-of-frame Intra-chr q11.1 q15 Seq+ 99781 ChimerSeq TCGA FAWG TCGA_RNA-Seq TET3-PATL1 TET3 chr2 74003166 + PATL1 chr11 59659469 - Exonic hg38 PRAD TCGA-VN-A943-01A 3 2 Out-of-frame Inter-chr p13.1 Transcription factor q12.1 99782 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUX2-CABP1 CUX2 chr12 111263839 + CABP1 chr12 120659878 + Exonic hg38 PRAD TCGA-VP-A872-01A 4 50 Out-of-frame Intra-chr q24.11 Transcription factor q24.31 Seq+ 99783 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFKBIA-TTC6 NFKBIA chr14 35403243 - TTC6 chr14 37790717 + Exonic hg38 PRAD TCGA-VP-A872-01A 4 37 In-Frame Intra-chr q13.2 q21.1 Seq+ 99784 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC6-ERCC6L2 TTC6 chr14 37737734 + ERCC6L2 chr9 95880869 + Exonic hg38 PRAD TCGA-VP-A872-01A 1 2 Out-of-frame Inter-chr q21.1 q22.32 99785 ChimerSeq TCGA FAWG TCGA_RNA-Seq TROVE2-CACNA1S TROVE2 chr1 193059776 + CACNA1S chr1 201070404 - Exonic hg38 PRAD TCGA-VP-A875-01A 10 60 Out-of-frame Intra-chr q31.2 q32.1 Seq+ 99786 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPM8-RAP1GAP TRPM8 chr2 233954019 + RAP1GAP chr1 21611800 - Exonic hg38 PRAD TCGA-VP-A875-01A 16 1 Out-of-frame Inter-chr q37.1 p36.12 Tumor suppressor gene 99787 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSKIP-CLDN6 GSKIP chr14 96379788 + CLDN6 chr16 3015181 - Exonic hg38 PRAD TCGA-VP-A875-01A 6 24 5'UTR-3'UTR Inter-chr q32.2 p13.3 Seq+ 99788 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC4A4-GOLGA4 SLC4A4 chr4 71547720 + GOLGA4 chr3 37355101 + Exonic hg38 PRAD TCGA-VP-A875-01A 4 13 In-Frame Inter-chr q13.3 p22.2 Seq+ 99789 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMD1-EPG5 AMD1 chr6 110875215 + EPG5 chr18 45899566 - Exonic hg38 PRAD TCGA-VP-A875-01A 2 18 In-Frame Inter-chr q21 q21.1 Seq+ 99790 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT6B-SH3BP5L KAT6B chr10 74843478 + SH3BP5L chr1 248826521 - Exonic hg38 PRAD TCGA-VP-A875-01A 3 12 3'UTR-5'UTR Inter-chr Oncogene q44 Seq+ 99791 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K5-CLVS2 MAP3K5 chr6 136650984 - CLVS2 chr6 123048622 + Exonic hg38 PRAD TCGA-VP-A875-01A 3 9 In-Frame Intra-chr q23.3 STE:STE11 q22.31 Seq+ 99792 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP1B1-CLTCL1 AP1B1 chr22 29388424 - CLTCL1 chr22 19234706 - Exonic hg38 PRAD TCGA-VP-A875-01A 2 12 5'UTR-CDS Intra-chr q12.2 q11.21 Seq+ 99793 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLASP2-NMNAT3 CLASP2 chr3 33644757 - NMNAT3 chr3 139579055 - Exonic hg38 PRAD TCGA-VP-A875-01A 2 9 In-Frame Intra-chr p22.3 q23 Seq+ 99794 ChimerSeq TCGA FAWG TCGA_RNA-Seq EZR-SNX9 EZR chr6 158818082 - SNX9 chr6 157896827 + Exonic hg38 PRAD TCGA-VP-A875-01A 2 9 In-Frame Intra-chr q25.3 q25.3 Seq+ 99795 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP3D1-KCTD19 AP3D1 chr19 2138619 - KCTD19 chr16 67320885 - Exonic hg38 PRAD TCGA-VP-A875-01A 2 7 In-Frame Inter-chr p13.3 q22.1 Seq+ 99796 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFNGR1-SMCHD1 IFNGR1 chr6 137219243 - SMCHD1 chr18 2760652 + Exonic hg38 PRAD TCGA-VP-A875-01A 1 7 Out-of-frame Inter-chr q23.3 p11.32 Tumor suppressor gene Seq+ 99797 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1B-RAET1G ARID1B chr6 156779471 + RAET1G chr6 149919816 - Exonic hg38 PRAD TCGA-VP-A875-01A 1 2 Out-of-frame Intra-chr q25.3 Oncogene q25.1 99798 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT6A-FCGR1B KAT6A chr8 42048378 - FCGR1B chr1 121092996 + Exonic hg38 PRAD TCGA-VP-A875-01A 1 2 Out-of-frame Inter-chr p11.21 Oncogene p11.2 99799 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR160-PDCD10 GPR160 chr3 170039043 + PDCD10 chr3 167687316 - Exonic hg38 PRAD TCGA-VP-A876-01A 4 11 5'UTR-CDS Intra-chr q26.2 q26.1 Seq+ 99800 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDT-TPST2 DDT chr22 23973768 - TPST2 chr22 26544675 - Exonic hg38 PRAD TCGA-VP-A876-01A 3 7 5'UTR-5'UTR Intra-chr q12.1 Seq+ 99801 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCC4-CCDC169 ABCC4 chr13 95186701 - CCDC169 chr13 36227381 - Exonic hg38 PRAD TCGA-VP-A876-01A 2 5 Out-of-frame Intra-chr q32.1 q13.3 Seq+ 99802 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIPA1L2-TRIM11 SIPA1L2 chr1 232490874 - TRIM11 chr1 228402161 - Exonic hg38 PRAD TCGA-VP-A876-01A 2 3 In-Frame Intra-chr q42.2 q42.13 Seq+ 99803 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF326-NEGR1 ZNF326 chr1 90005092 + NEGR1 chr1 71698139 - Exonic hg38 PRAD TCGA-VP-A876-01A 2 3 5'UTR-CDS Intra-chr p22.2 Transcription factor p31.1 Seq+ 99804 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOR1-CCDC144A NCOR1 chr17 16061401 - CCDC144A chr17 16761425 + Exonic hg38 PRAD TCGA-VP-A876-01A 2 1 Out-of-frame Intra-chr p11.2 Oncogene p11.2 Seq+ 99805 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCMTD1-ST18 PCMTD1 chr8 51898930 - ST18 chr8 52230077 - Exonic hg38 PRAD TCGA-VP-A878-01A 2 8 5'UTR-5'UTR Intra-chr q11.23 q11.23 Transcription factor Seq+ 99806 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH1-TRHDE CDH1 chr16 68801893 + TRHDE chr12 72377995 + Exonic hg38 PRAD TCGA-VP-A879-01A 4 12 In-Frame Inter-chr q22.1 Oncogene Tumor suppressor gene q21.1 Seq+ 99807 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGMS1-VSTM4 SGMS1 chr10 50433476 - VSTM4 chr10 49019775 - Exonic hg38 PRAD TCGA-VP-A87B-01A 4 19 5'UTR-CDS Intra-chr q11.23 Tumor suppressor gene q11.23 Seq+ 99808 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUMO1-MBD5 SUMO1 chr2 202220032 - MBD5 chr2 148054391 + Exonic hg38 PRAD TCGA-VP-A87B-01A 5 2 CDS-5'UTR Intra-chr q33.1 q23.1 Seq+ 99809 ChimerSeq TCGA FAWG TCGA_RNA-Seq UAP1-LIX1L UAP1 chr1 162566348 + LIX1L chr1 145947782 - Exonic hg38 PRAD TCGA-VP-A87B-01A 4 6 In-Frame Intra-chr q23.3 q21.1 Seq+ 99810 ChimerSeq TCGA FAWG TCGA_RNA-Seq SREBF1-STAT3 SREBF1 chr17 17823518 - STAT3 chr17 42348539 - Exonic hg38 PRAD TCGA-VP-A87C-01A 22 67 CDS-5'UTR Intra-chr p11.2 Transcription factor q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 99811 ChimerSeq TCGA FAWG TCGA_RNA-Seq C14orf37-KIR2DL1 C14orf37 chr14 58131512 - KIR2DL1 chr19 54778612 + Exonic hg38 PRAD TCGA-VP-A87D-01A 8 38 Out-of-frame Inter-chr q23.1 Seq+ 99812 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2E2-FBXO16 GTF2E2 chr8 30635032 - FBXO16 chr8 28428736 - Exonic hg38 PRAD TCGA-VP-A87D-01A 7 20 Out-of-frame Intra-chr p12 p21.1 Seq+ 99813 ChimerSeq TCGA FAWG TCGA_RNA-Seq OCLN-CDK14 OCLN chr5 69509819 + CDK14 chr7 91207165 + Exonic hg38 PRAD TCGA-VP-A87D-01A 2 18 CDS-3'UTR Inter-chr q13.2 q21.13 Seq+ 99814 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYLD-FAM49B CYLD chr16 50742841 + FAM49B chr8 129970995 - Exonic hg38 PRAD TCGA-VP-A87D-01A 3 5 5'UTR-5'UTR Inter-chr q12.1 Oncogene Tumor suppressor gene q24.21 Seq+ 99815 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO11-INTS9 FBXO11 chr2 47905489 - INTS9 chr8 28813612 - Exonic hg38 PRAD TCGA-VP-A87D-01A 2 7 Out-of-frame Inter-chr p16.3 p21.1 Seq+ 99816 ChimerSeq TCGA FAWG TCGA_RNA-Seq FKBP1A-CTDP1 FKBP1A chr20 1392834 - CTDP1 chr18 79695225 + Exonic hg38 PRAD TCGA-VP-A87D-01A 2 6 CDS-3'UTR Inter-chr p13 Seq+ 99817 ChimerSeq TCGA FAWG TCGA_RNA-Seq NME7-KMO NME7 chr1 169230718 - KMO chr1 241586679 + Exonic hg38 PRAD TCGA-VP-A87D-01A 1 2 In-Frame Intra-chr q24.2 q43 Seq+ 99818 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPD52-C15orf65 TPD52 chr8 80064478 - C15orf65 chr15 55418223 + Exonic hg38 PRAD TCGA-VP-A87D-01A 1 1 In-Frame Inter-chr q21.13 q21.3 99819 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF12-GRIK4 ARHGEF12 chr11 120337275 + GRIK4 chr11 120940347 + Exonic hg38 PRAD TCGA-VP-A87J-01A 7 69 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Seq+ 99820 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTEN-C1orf226 PTEN chr10 87894109 + C1orf226 chr1 162383182 + Exonic hg38 PRAD TCGA-VP-A87J-01A 5 52 3'UTR-CDS Inter-chr q23.31 Oncogene Tumor suppressor gene q23.3 Seq+ 99821 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0907-ASH1L KIAA0907 chr1 155933633 - ASH1L chr1 155459898 - Exonic hg38 PRAD TCGA-VP-A87J-01A 4 18 Out-of-frame Intra-chr q22 q22 Transcription factor Seq+ 99822 ChimerSeq TCGA FAWG TCGA_RNA-Seq PI4KA-FAM175A PI4KA chr22 20793193 - FAM175A chr4 83482244 - Exonic hg38 PRAD TCGA-VP-A87J-01A 6 9 Out-of-frame Inter-chr q11.21 q21.23 Seq+ 99823 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOPEY2-MYOSLID DOPEY2 chr21 36251284 + MYOSLID chr2 207245289 + Exonic hg38 PRAD TCGA-VP-A87K-01A 37 85 Out-of-frame Inter-chr q22.12 q33.3 99824 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZZZ3-CXCL11 ZZZ3 chr1 77683262 - CXCL11 chr4 76036064 - Exonic hg38 PRAD TCGA-VP-A87K-01A 16 38 5'UTR-5'UTR Inter-chr p31.1 Transcription factor q21.1 Seq+ 99825 ChimerSeq TCGA FAWG TCGA_RNA-Seq WBP1L-ADTRP WBP1L chr10 102798095 + ADTRP chr6 11768383 - Exonic hg38 PRAD TCGA-VP-A87K-01A 6 24 Out-of-frame Inter-chr q24.32 p24.1 Seq+ 99826 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP3CA-SEPT11 PPP3CA chr4 101346739 - SEPT11 chr4 76996425 + Exonic hg38 PRAD TCGA-VP-A87K-01A 4 13 Out-of-frame Intra-chr q24 q21.1 Seq+ 99827 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF38-COL25A1 ARHGEF38 chr4 105613507 + COL25A1 chr4 108846219 - Exonic hg38 PRAD TCGA-VP-A87K-01A 4 12 Out-of-frame Intra-chr q24 q25 Seq+ 99828 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTR1A-STN1 ACTR1A chr10 102502600 - STN1 chr10 103882841 - Exonic hg38 PRAD TCGA-VP-A87K-01A 4 10 Out-of-frame Intra-chr q24.32 q24.33 99829 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC16B-EGF SEC16B chr1 177958134 - EGF chr4 109993245 + Exonic hg38 PRAD TCGA-VP-A87K-01A 3 5 Out-of-frame Inter-chr q25.2 q25 Seq+ 99830 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDZRN3-EIF4E3 PDZRN3 chr3 73602354 - EIF4E3 chr3 71728623 - Exonic hg38 PRAD TCGA-VP-A87K-01A 1 12 CDS-5'UTR Intra-chr p13 p13 Seq+ 99831 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM19-CLK2 RBM19 chr12 113927054 - CLK2 chr1 155270977 - Exonic hg38 PRAD TCGA-VP-A87K-01A 2 7 CDS-5'UTR Inter-chr q24.21 q22 CMGC:CLK Seq+ 99832 ChimerSeq TCGA FAWG TCGA_RNA-Seq UGGT1-FOXP1 UGGT1 chr2 128182290 + FOXP1 chr3 70978029 - Exonic hg38 PRAD TCGA-VP-A87K-01A 2 2 Out-of-frame Inter-chr q14.3 p13 Oncogene Tumor suppressor gene Transcription factor Seq+ 99833 ChimerSeq TCGA FAWG TCGA_RNA-Seq BICDL2-TP53 BICDL2 chr16 3028348 - TP53 chr17 7675236 - Exonic hg38 PRAD TCGA-VP-A87K-01A 1 4 In-Frame Inter-chr p13.3 p13.1 Oncogene Tumor suppressor gene Transcription factor 99834 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGPL1-BTBD9 SGPL1 chr10 70816880 + BTBD9 chr6 38192597 - Exonic hg38 PRAD TCGA-VP-A87K-01A 1 4 Out-of-frame Inter-chr q22.1 p21.2 Seq+ 99835 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT7-CEP44 GALNT7 chr4 173304118 + CEP44 chr4 174331482 + Exonic hg38 PRAD TCGA-VP-AA1N-01A 60 310 In-Frame Intra-chr q34.1 q34.1 Seq+ 99836 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB4A-CNIH3 RAB4A chr1 229299072 + CNIH3 chr1 224521000 + Exonic hg38 PRAD TCGA-WW-A8ZI-01A 164 546 5'UTR-5'UTR Intra-chr q42.13 q42.12 Seq+ 99837 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACPP-ZNF462 ACPP chr3 132317576 + ZNF462 chr9 106923354 + Exonic hg38 PRAD TCGA-WW-A8ZI-01A 12 44 CDS-5'UTR Inter-chr q22.1 q31.2 Transcription factor Seq+ 99838 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53-ECSIT TP53 chr17 7673535 - ECSIT chr19 11519193 - Exonic hg38 PRAD TCGA-WW-A8ZI-01A 3 7 CDS-5'UTR Inter-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.2 Seq+ 99839 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD2-DOK7 NSD2 chr4 1939778 + DOK7 chr4 3485539 + Exonic hg38 PRAD TCGA-WW-A8ZI-01A 1 3 Out-of-frame Intra-chr p16.3 p16.3 99840 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX23-SLC25A10 DDX23 chr12 48835527 - SLC25A10 chr17 81717788 + Exonic hg38 PRAD TCGA-X4-A8KQ-01A 6 36 Out-of-frame Inter-chr q13.12 q25.3 Seq+ 99841 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC11A2-CDC27 SLC11A2 chr12 51026315 - CDC27 chr17 47129521 - Exonic hg38 PRAD TCGA-X4-A8KQ-01A 5 3 5'UTR-5'UTR Inter-chr q13.12 q21.32 Seq+ 99842 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRBA-AS2 LRBA chr4 151014427 - AS2 chr3 189238956 - Exonic hg38 PRAD TCGA-XA-A8JR-01A 1 17 Out-of-frame Inter-chr q31.3 99843 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A3-TMPRSS2 SLC45A3 chr1 205659489 - TMPRSS2 chr21 41494578 - Exonic hg38 PRAD TCGA-XJ-A83F-01A 1000 1000 In-Frame Inter-chr q32.1 q22.3 99844 ChimerSeq TCGA FAWG TCGA_RNA-Seq IRS2-MYO16 IRS2 chr13 109782042 - MYO16 chr13 109206609 + Exonic hg38 PRAD TCGA-XJ-A83G-01A 1 3 Out-of-frame Intra-chr q34 Oncogene 99845 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNK1-CHD3 TNK1 chr17 7387457 + CHD3 chr17 7911464 + Exonic hg38 PRAD TCGA-XJ-A83H-01A 4 6 3'UTR-CDS Intra-chr TK:Ack Tumor suppressor gene p13.1 Seq+ 99846 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMUG1-PPP2R5A SMUG1 chr12 54182504 - PPP2R5A chr1 212333497 + Exonic hg38 PRAD TCGA-XJ-A83H-01A 1 2 In-Frame Inter-chr q13.13 Oncogene q32.3 Seq+ 99847 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFF3-IL1B AFF3 chr2 99727077 - IL1B chr2 112836858 - Exonic hg38 PRAD TCGA-XJ-A9DI-01A 9 38 CDS-5'UTR Intra-chr q11.2 Oncogene q14.1 Seq+ 99848 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAU1-CYP26B1 STAU1 chr20 49151582 - CYP26B1 chr2 72135419 - Exonic hg38 PRAD TCGA-XJ-A9DI-01A 1 4 In-Frame Inter-chr q13.13 p13.2 Seq+ 99849 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMG1-SNF8 SMG1 chr16 18925950 - SNF8 chr17 48941062 - Exonic hg38 PRAD TCGA-XJ-A9DK-01A 7 26 Out-of-frame Inter-chr p12.3 Atypical:PIKK q21.32 Seq+ 99850 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1XR1-C7orf72 TBL1XR1 chr3 177197121 - C7orf72 chr7 50104314 + Exonic hg38 PRAD TCGA-XJ-A9DK-01A 7 2 Out-of-frame Inter-chr q26.32 p12.2 Seq+ 99851 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1XR1-AKR1E2 TBL1XR1 chr3 177098466 - AKR1E2 chr10 4830675 + Exonic hg38 PRAD TCGA-XJ-A9DK-01A 1 13 5'UTR-5'UTR Inter-chr q26.32 p15.1 99852 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASXL2-IDH1 ASXL2 chr2 25878166 - IDH1 chr2 208251567 - Exonic hg38 PRAD TCGA-XJ-A9DK-01A 1 9 CDS-5'UTR Intra-chr p23.3 q34 Oncogene Tumor suppressor gene 99853 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205680394 - ERG chr21 38445621 - Exonic hg38 PRAD TCGA-XJ-A9DQ-01A 8 91 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 99854 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOV10-ZNHIT6 MOV10 chr1 112675049 + ZNHIT6 chr1 85680904 - Exonic hg38 PRAD TCGA-XJ-A9DQ-01A 5 13 In-Frame Intra-chr p13.2 p22.3 Seq+ 99855 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGPAT3-ELK4 AGPAT3 chr21 43971490 + ELK4 chr1 205600794 - Exonic hg38 PRAD TCGA-XJ-A9DQ-01A 3 9 CDS-3'UTR Inter-chr q22.3 q32.1 Transcription factor Seq+ 99856 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELOVL5-CRYL1 ELOVL5 chr6 53348817 - CRYL1 chr13 20489496 - Exonic hg38 PRAD TCGA-XJ-A9DQ-01A 2 2 5'UTR-CDS Inter-chr p12.1 q12.11 99857 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D23-TMEM45A TBC1D23 chr3 100279760 + TMEM45A chr3 100568822 + Exonic hg38 PRAD TCGA-XJ-A9DX-01A 16 23 In-Frame Intra-chr q12.1 q12.2 Seq+ 99858 ChimerSeq TCGA FAWG TCGA_RNA-Seq BBS9-DPY19L2P3 BBS9 chr7 33534176 + DPY19L2P3 chr7 29742147 + Exonic hg38 PRAD TCGA-XJ-A9DX-01A 9 29 5'UTR-5'UTR Intra-chr p14.3 p14.3 99859 ChimerSeq TCGA FAWG TCGA_RNA-Seq FZR1-CELF5 FZR1 chr19 3506474 + CELF5 chr19 3293319 + Exonic hg38 PRAD TCGA-XJ-A9DX-01A 10 22 5'UTR-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 99860 ChimerSeq TCGA FAWG TCGA_RNA-Seq REPS2-TXLNG REPS2 chrX 17133907 + TXLNG chrX 16834283 + Exonic hg38 PRAD TCGA-XJ-A9DX-01A 9 25 In-Frame Intra-chr p22.2 p22.2 Seq+ 99861 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1H-WIF1 PPM1H chr12 62737502 - WIF1 chr12 65068904 - Exonic hg38 PRAD TCGA-XJ-A9DX-01A 8 27 Out-of-frame Intra-chr q14.2 q14.3 Tumor suppressor gene Seq+ 99862 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABHD17B-CCL25 ABHD17B chr9 71910634 - CCL25 chr19 8053000 + Exonic hg38 PRAD TCGA-XJ-A9DX-01A 1 51 5'UTR-5'UTR Inter-chr q21.13 p13.2 Seq+ 99863 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP11B-HECW1 ATP11B chr3 182842122 + HECW1 chr7 43507137 + Exonic hg38 PRAD TCGA-XJ-A9DX-01A 6 10 Out-of-frame Inter-chr q26.33 Oncogene p14.1 Seq+ 99864 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEMIP-KATNAL2 CEMIP chr15 80909306 + KATNAL2 chr18 47046457 + Exonic hg38 PRAD TCGA-XJ-A9DX-01A 4 5 In-Frame Inter-chr q25.1 q21.1 99865 ChimerSeq TCGA FAWG TCGA_RNA-Seq MMP15-DRC7 MMP15 chr16 58043627 + DRC7 chr16 57726068 + Exonic hg38 PRAD TCGA-XJ-A9DX-01A 1 8 Out-of-frame Intra-chr q21 q21 99866 ChimerSeq TCGA FAWG TCGA_RNA-Seq CARMIL1-CDKAL1 CARMIL1 chr6 25556850 + CDKAL1 chr6 21198021 + Exonic hg38 PRAD TCGA-XJ-A9DX-01A 1 7 In-Frame Intra-chr p22.2 p22.3 99867 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM208A-ASB14 FAM208A chr3 56633044 - ASB14 chr3 57289123 - Exonic hg38 PRAD TCGA-XJ-A9DX-01A 2 2 Out-of-frame Intra-chr p14.3 p14.3 99868 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGAPA1-SLC25A21 RALGAPA1 chr14 35595634 - SLC25A21 chr14 36875004 - Exonic hg38 PRAD TCGA-XJ-A9DX-01A 1 6 Out-of-frame Intra-chr q13.2 q13.3 Seq+ 99869 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R37-BCL3 PPP1R37 chr19 45093527 + BCL3 chr19 44751227 + Exonic hg38 PRAD TCGA-XJ-A9DX-01A 1 1 In-Frame Intra-chr q13.32 q13.32 Oncogene 99870 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-EML4 TMPRSS2 chr21 41487240 - EML4 chr2 42331691 + Exonic hg38 PRAD TCGA-XK-AAIV-01A 137 878 Out-of-frame Inter-chr q22.3 p21 Oncogene Seq+ 99871 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDRG1-MYC NDRG1 chr8 133280235 - MYC chr8 127738248 + Exonic hg38 PRAD TCGA-XK-AAIV-01A 24 99 In-Frame Intra-chr q24.22 Tumor suppressor gene q24.21 Oncogene Transcription factor Seq+ 99872 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD22-MSMB ANKRD22 chr10 88826038 - MSMB chr10 46040091 - Exonic hg38 PRAD TCGA-XK-AAIV-01A 31 50 In-Frame Intra-chr q23.31 q11.22 Tumor suppressor gene Seq+ 99873 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA2-SGSM3 NCOA2 chr8 70403700 - SGSM3 chr22 40400696 + Exonic hg38 PRAD TCGA-XK-AAIV-01A 24 75 5'UTR-5'UTR Inter-chr q13.3 Oncogene Transcription factor q13.1 Seq+ 99874 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-INTS4 PPFIA1 chr11 70355811 + INTS4 chr11 77883952 - Exonic hg38 PRAD TCGA-XK-AAIV-01A 18 42 Out-of-frame Intra-chr q13.3 q14.1 Seq+ 99875 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD8-PSMD9 FRMD8 chr11 65405068 + PSMD9 chr12 121915856 + Exonic hg38 PRAD TCGA-XK-AAIV-01A 15 27 Out-of-frame Inter-chr q13.1 q24.31 Seq+ 99876 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSF1-MICALL1 HSF1 chr8 144291874 + MICALL1 chr22 37911952 + Exonic hg38 PRAD TCGA-XK-AAIV-01A 15 9 3'UTR-CDS Inter-chr q24.3 Transcription factor q13.1 Seq+ 99877 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM47-LEF1 RBM47 chr4 40629396 - LEF1 chr4 108048751 - Exonic hg38 PRAD TCGA-XK-AAIV-01A 8 37 5'UTR-CDS Intra-chr p14 q25 Transcription factor Seq+ 99878 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM168B-ANKRD42 FAM168B chr2 131082577 - ANKRD42 chr11 83224855 + Exonic hg38 PRAD TCGA-XK-AAIV-01A 4 29 In-Frame Inter-chr q21.1 q14.1 Seq+ 99879 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAT2B-SFXN1 MAT2B chr5 163505749 + SFXN1 chr5 175492095 + Exonic hg38 PRAD TCGA-XK-AAIV-01A 3 14 CDS-5'UTR Intra-chr q34 q35.2 Seq+ 99880 ChimerSeq TCGA FAWG TCGA_RNA-Seq NTPCR-SMIM22 NTPCR chr1 232956443 + SMIM22 chr16 4794952 + Exonic hg38 PRAD TCGA-XK-AAIV-01A 2 9 5'UTR-5'UTR Inter-chr q42.2 p13.3 Seq+ 99881 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTFR1-PEX2 MTFR1 chr8 65708011 + PEX2 chr8 76984195 - Exonic hg38 PRAD TCGA-XK-AAIV-01A 2 3 CDS-5'UTR Intra-chr q13.1 q21.13 Seq+ 99882 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF4ENIF1-C22orf24 EIF4ENIF1 chr22 31471844 - C22orf24 chr22 31934449 - Exonic hg38 PRAD TCGA-XK-AAIV-01A 2 2 Out-of-frame Intra-chr q12.2 q12.3 Seq+ 99883 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAL2-FER1L6 MAL2 chr8 119208604 + FER1L6 chr8 123955992 + Exonic hg38 PRAD TCGA-XK-AAIV-01A 1 2 CDS-5'UTR Intra-chr q24.12 q24.13 99884 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGD4-MRPS35 FGD4 chr12 32399959 + MRPS35 chr12 27714780 + Exonic hg38 PRAD TCGA-XK-AAJ3-01A 9 14 In-Frame Intra-chr p11.21 p11.22 Seq+ 99885 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXA1-MIPOL1 FOXA1 chr14 37591400 - MIPOL1 chr14 37499908 + Exonic hg38 PRAD TCGA-XK-AAJ3-01A 8 9 Out-of-frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q13.3 Seq+ 99886 ChimerSeq TCGA FAWG TCGA_RNA-Seq TARSL2-CERS3 TARSL2 chr15 101684075 - CERS3 chr15 100456046 - Exonic hg38 PRAD TCGA-XK-AAJ3-01A 1 8 Out-of-frame Intra-chr q26.3 q26.3 99887 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL2L14-GPR19 BCL2L14 chr12 12087386 + GPR19 chr12 12695511 - Exonic hg38 PRAD TCGA-XK-AAJA-01A 2 22 3'UTR-5'UTR Intra-chr p13.1 Seq+ 99888 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT14-NRXN1 GALNT14 chr2 31137958 - NRXN1 chr2 49943791 - Exonic hg38 PRAD TCGA-XK-AAJA-01A 3 10 In-Frame Intra-chr p23.1 p16.3 Seq+ 99889 ChimerSeq TCGA FAWG TCGA_RNA-Seq UCK2-FAM78B UCK2 chr1 165827932 + FAM78B chr1 166060663 - Exonic hg38 PRAD TCGA-XK-AAJA-01A 4 5 Out-of-frame Intra-chr q24.1 q24.1 99890 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYRK1A-KCNJ6 DYRK1A chr21 37420384 + KCNJ6 chr21 37715131 - Exonic hg38 PRAD TCGA-XK-AAJA-01A 3 7 In-Frame Intra-chr q22.13 CMGC:DYRK q22.13 Seq+ 99891 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCE-QPCT PRKCE chr2 45652448 + QPCT chr2 37352789 + Exonic hg38 PRAD TCGA-XK-AAJA-01A 2 11 In-Frame Intra-chr p21 Tumor suppressor gene p22.2 Seq+ 99892 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSK3B-PLA1A GSK3B chr3 119905755 - PLA1A chr3 119628701 + Exonic hg38 PRAD TCGA-XK-AAJA-01A 2 9 Out-of-frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q13.33 Seq+ 99893 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANAPC4-RBPJ ANAPC4 chr4 25396899 + RBPJ chr4 26406175 + Exonic hg38 PRAD TCGA-XK-AAJA-01A 2 5 In-Frame Intra-chr p15.2 p15.2 Transcription factor 99894 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPS7A-CLSTN3 COPS7A chr12 6730820 + CLSTN3 chr12 7157489 + Exonic hg38 PRAD TCGA-XK-AAJA-01A 2 3 Out-of-frame Intra-chr p13.31 p13.31 99895 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPEB2-LDB2 CPEB2 chr4 15007586 + LDB2 chr4 16512104 - Exonic hg38 PRAD TCGA-XK-AAJA-01A 2 3 3'UTR-3'UTR Intra-chr p15.32 Seq+ 99896 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A40-ADAM22 SLC25A40 chr7 87846949 - ADAM22 chr7 88193116 + Exonic hg38 PRAD TCGA-XK-AAJA-01A 1 7 Out-of-frame Intra-chr q21.12 q21.12 Seq+ 99897 ChimerSeq TCGA FAWG TCGA_RNA-Seq EVI5-HFM1 EVI5 chr1 92563642 - HFM1 chr1 91277062 - Exonic hg38 PRAD TCGA-XK-AAJA-01A 1 3 Out-of-frame Intra-chr p22.1 p22.2 99898 ChimerSeq TCGA FAWG TCGA_RNA-Seq APC-MCC APC chr5 112707882 + MCC chr5 113151422 - Exonic hg38 PRAD TCGA-XK-AAJA-01A 1 1 In-Frame Intra-chr q22.2 Oncogene Tumor suppressor gene q22.2 Tumor suppressor gene 99899 ChimerSeq TCGA FAWG TCGA_RNA-Seq BANK1-C4orf22 BANK1 chr4 101918189 + C4orf22 chr4 80963517 + Exonic hg38 PRAD TCGA-XK-AAJT-01A 14 32 Out-of-frame Intra-chr q24 q21.21 Seq+ 99900 ChimerSeq TCGA FAWG TCGA_RNA-Seq VAV2-COL27A1 VAV2 chr9 133939103 - COL27A1 chr9 114284724 + Exonic hg38 PRAD TCGA-XQ-A8TA-01A 63 251 In-Frame Intra-chr q34.2 q32 Seq+ 99901 ChimerSeq TCGA FAWG TCGA_RNA-Seq RGS3-ABCA1 RGS3 chr9 113463881 + ABCA1 chr9 104840519 - Exonic hg38 PRAD TCGA-XQ-A8TA-01A 20 47 Out-of-frame Intra-chr q32 q31.1 Seq+ 99902 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC14B-AUH CDC14B chr9 96619219 - AUH chr9 91298076 - Exonic hg38 PRAD TCGA-XQ-A8TA-01A 9 69 In-Frame Intra-chr q22.33 q22.31 Seq+ 99903 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM8A-YBX3 TMEM8A chr16 381701 - YBX3 chr12 10704148 - Exonic hg38 PRAD TCGA-XQ-A8TA-01A 9 32 Out-of-frame Inter-chr p13.3 p13.2 Transcription factor Seq+ 99904 ChimerSeq TCGA FAWG TCGA_RNA-Seq USPL1-ANKRD7 USPL1 chr13 30618056 + ANKRD7 chr7 118259837 + Exonic hg38 PRAD TCGA-XQ-A8TA-01A 7 21 5'UTR-3'UTR Inter-chr q12.3 q31.31 99905 ChimerSeq TCGA FAWG TCGA_RNA-Seq STX17-DAB2IP STX17 chr9 99906706 + DAB2IP chr9 121757013 + Exonic hg38 PRAD TCGA-XQ-A8TA-01A 11 3 5'UTR-5'UTR Intra-chr q31.1 q33.2 Tumor suppressor gene Seq+ 99906 ChimerSeq TCGA FAWG TCGA_RNA-Seq YBX3-TMEM8A YBX3 chr12 10709908 - TMEM8A chr16 377848 - Exonic hg38 PRAD TCGA-XQ-A8TA-01A 3 26 Out-of-frame Inter-chr p13.2 Transcription factor p13.3 Seq+ 99907 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX30-ALDOB SNX30 chr9 112880594 + ALDOB chr9 101421904 - Exonic hg38 PRAD TCGA-XQ-A8TA-01A 4 16 3'UTR-CDS Intra-chr q32 q31.1 Seq+ 99908 ChimerSeq TCGA FAWG TCGA_RNA-Seq EZH1-IGFBP5 EZH1 chr17 42727635 - IGFBP5 chr2 216679079 - Exonic hg38 PRAD TCGA-XQ-A8TA-01A 4 14 Out-of-frame Inter-chr q21.2 Tumor suppressor gene q35 Tumor suppressor gene Seq+ 99909 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANAPC7-PAH ANAPC7 chr12 110403527 - PAH chr12 102877550 - Exonic hg38 PRAD TCGA-XQ-A8TA-01A 4 10 Out-of-frame Intra-chr q24.11 q23.2 Seq+ 99910 ChimerSeq TCGA FAWG TCGA_RNA-Seq FANCC-ROR2 FANCC chr9 95240649 - ROR2 chr9 91775818 - Exonic hg38 PRAD TCGA-XQ-A8TA-01A 3 13 Out-of-frame Intra-chr q22.32 Oncogene q22.31 TK:Ror Tumor suppressor gene Seq+ 99911 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM134B-TPPP FAM134B chr5 16565763 - TPPP chr5 678064 - Exonic hg38 PRAD TCGA-XQ-A8TA-01A 4 6 Out-of-frame Intra-chr p15.33 Seq+ 99912 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLPH3L-CTSS GOLPH3L chr1 150661814 - CTSS chr1 150755150 - Exonic hg38 PRAD TCGA-XQ-A8TA-01A 1 12 Out-of-frame Intra-chr q21.3 q21.3 99913 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH2-SEC22B NOTCH2 chr1 119996997 - SEC22B chr1 120168949 - Exonic hg38 PRAD TCGA-XQ-A8TA-01A 1 3 Out-of-frame Intra-chr p12 Oncogene Tumor suppressor gene p12 Seq+ 99914 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD22-LRRTM3 ANKRD22 chr10 88851587 - LRRTM3 chr10 67097587 + Exonic hg38 PRAD TCGA-XQ-A8TB-01A 7 23 In-Frame Intra-chr q23.31 q21.3 Seq+ 99915 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERG-ABCC4 ERG chr21 38575662 - ABCC4 chr13 95247753 - Exonic hg38 PRAD TCGA-XQ-A8TB-01A 3 15 Out-of-frame Inter-chr q22.2 Oncogene Transcription factor q32.1 Seq+ 99916 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRJ-PPP2CB PTPRJ chr11 48146963 + PPP2CB chr8 30791315 - Exonic hg38 PRAD TCGA-XQ-A8TB-01A 4 2 Out-of-frame Inter-chr p11.2 Tumor suppressor gene p12 Tumor suppressor gene Seq+ 99917 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF12-RNF111 TCF12 chr15 57234107 + RNF111 chr15 59030804 + Exonic hg38 PRAD TCGA-XQ-A8TB-01A 1 7 CDS-5'UTR Intra-chr q21.3 Oncogene Transcription factor q22.1 Tumor suppressor gene 99918 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA4-SRSF7 NCOA4 chr10 46030526 - SRSF7 chr2 38750194 - Exonic hg38 PRAD TCGA-Y6-A9XI-01A 24 91 5'UTR-CDS Inter-chr q11.22 Oncogene Tumor suppressor gene p22.1 Seq+ 99919 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2B-ODF2L GTF2B chr1 88891483 - ODF2L chr1 86360536 - Exonic hg38 PRAD TCGA-Y6-A9XI-01A 5 28 Out-of-frame Intra-chr p22.2 Transcription factor p22.3 Seq+ 99920 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID5B-KAT6A ARID5B chr10 62092701 + KAT6A chr8 41981954 - Exonic hg38 PRAD TCGA-Y6-A9XI-01A 4 19 Out-of-frame Inter-chr q21.2 Transcription factor p11.21 Oncogene Seq+ 99921 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP1-RHOU AGAP1 chr2 235494849 + RHOU chr1 228743285 + Exonic hg38 PRAD TCGA-Y6-A9XI-01A 3 11 CDS-3'UTR Inter-chr q37.2 q42.13 Seq+ 99922 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLD1-LMBR1 PLD1 chr3 171771195 - LMBR1 chr7 156836885 - Exonic hg38 PRAD TCGA-Y6-A9XI-01A 2 14 5'UTR-5'UTR Inter-chr q26.31 Tumor suppressor gene q36.3 Seq+ 99923 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT6A-VDAC3 KAT6A chr8 41987455 - VDAC3 chr8 42393845 + Exonic hg38 PRAD TCGA-Y6-A9XI-01A 1 13 CDS-5'UTR Intra-chr p11.21 Oncogene p11.21 Seq+ 99924 ChimerSeq TCGA FAWG TCGA_RNA-Seq AXIN1-PDCD2 AXIN1 chr16 346148 - PDCD2 chr6 170578970 - Exonic hg38 PRAD TCGA-Y6-A9XI-01A 1 8 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene q27 99925 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNTNAP2-GSTK1 CNTNAP2 chr7 146839904 + GSTK1 chr7 143263148 + Exonic hg38 PRAD TCGA-YJ-A8SW-01A 44 119 3'UTR-5'UTR Intra-chr Tumor suppressor gene q34 Seq+ 99926 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDLBP-NSRP1 HDLBP chr2 241229833 - NSRP1 chr17 30172542 + Exonic hg38 PRAD TCGA-YJ-A8SW-01A 20 80 In-Frame Inter-chr q37.3 q11.2 Seq+ 99927 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS15L1-CPAMD8 EPS15L1 chr19 16471913 - CPAMD8 chr19 16938446 - Exonic hg38 PRAD TCGA-YJ-A8SW-01A 25 34 In-Frame Intra-chr p13.11 p13.11 Seq+ 99928 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNC1H1-EVL DYNC1H1 chr14 102012470 + EVL chr14 100084687 + Exonic hg38 PRAD TCGA-YJ-A8SW-01A 16 62 Out-of-frame Intra-chr q32.31 q32.2 Seq+ 99929 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO7-RALBP1 ANO7 chr2 241218381 + RALBP1 chr18 9530834 + Exonic hg38 PRAD TCGA-YJ-A8SW-01A 12 62 Out-of-frame Inter-chr q37.3 p11.22 Seq+ 99930 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRUNE1-RAB7A PRUNE1 chr1 151008671 + RAB7A chr3 128795360 + Exonic hg38 PRAD TCGA-YJ-A8SW-01A 7 66 5'UTR-5'UTR Inter-chr q21.3 q21.3 Tumor suppressor gene 99931 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM49A-RAD51AP2 FAM49A chr2 16623864 - RAD51AP2 chr2 17510955 - Exonic hg38 PRAD TCGA-YJ-A8SW-01A 5 39 5'UTR-CDS Intra-chr p24.2 p24.2 Seq+ 99932 ChimerSeq TCGA FAWG TCGA_RNA-Seq LUC7L2-MRPS33 LUC7L2 chr7 139376156 + MRPS33 chr7 141010660 - Exonic hg38 PRAD TCGA-YJ-A8SW-01A 7 27 CDS-5'UTR Intra-chr q34 q34 Seq+ 99933 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCMTD1-ST18 PCMTD1 chr8 51845661 - ST18 chr8 52230077 - Exonic hg38 PRAD TCGA-YJ-A8SW-01A 4 30 5'UTR-5'UTR Intra-chr q11.23 q11.23 Transcription factor Seq+ 99934 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-RNF139 PVT1 chr8 127794734 + RNF139 chr8 124485831 + Exonic hg38 PRAD TCGA-YJ-A8SW-01A 7 11 5'UTR-CDS Intra-chr q24.21 q24.13 Seq+ 99935 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRYL-OCIAD2 FRYL chr4 48780078 - OCIAD2 chr4 48904611 - Exonic hg38 PRAD TCGA-YJ-A8SW-01A 6 12 5'UTR-5'UTR Intra-chr p11 p11 Seq+ 99936 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMOX-PANK2 SMOX chr20 4148977 + PANK2 chr20 3907926 + Exonic hg38 PRAD TCGA-YJ-A8SW-01A 8 4 5'UTR-5'UTR Intra-chr p13 p13 Seq+ 99937 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSRP1-CDK12 NSRP1 chr17 30116863 + CDK12 chr17 39490557 + Exonic hg38 PRAD TCGA-YJ-A8SW-01A 3 23 In-Frame Intra-chr q11.2 q12 Oncogene Seq+ 99938 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF417-KIR2DL3 ZNF417 chr19 57909386 - KIR2DL3 chr19 54739507 + Exonic hg38 PRAD TCGA-YJ-A8SW-01A 3 23 CDS-3'UTR Intra-chr q13.43 Transcription factor 99939 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX30-LIMD1 DHX30 chr3 47803212 + LIMD1 chr3 45665650 + Exonic hg38 PRAD TCGA-YJ-A8SW-01A 4 13 5'UTR-CDS Intra-chr p21.31 p21.31 Tumor suppressor gene Seq+ 99940 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAQR3-ANTXR2 PAQR3 chr4 78926521 - ANTXR2 chr4 79984863 - Exonic hg38 PRAD TCGA-YJ-A8SW-01A 5 9 In-Frame Intra-chr q21.21 q21.21 Seq+ 99941 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCSER1-AFF1 CCSER1 chr4 90127831 + AFF1 chr4 87046166 + Exonic hg38 PRAD TCGA-YJ-A8SW-01A 3 15 5'UTR-CDS Intra-chr q22.1 q21.3 Oncogene Seq+ 99942 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFT43-RBM25 IFT43 chr14 75988977 + RBM25 chr14 73076319 + Exonic hg38 PRAD TCGA-YJ-A8SW-01A 3 9 Out-of-frame Intra-chr q24.3 q24.2 Seq+ 99943 ChimerSeq TCGA FAWG TCGA_RNA-Seq FARS2-RIPK1 FARS2 chr6 5545340 + RIPK1 chr6 3076764 + Exonic hg38 PRAD TCGA-YJ-A8SW-01A 1 12 CDS-5'UTR Intra-chr p25.1 p25.2 TKL:RIPK Seq+ 99944 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMTM8-ZNF385D CMTM8 chr3 32239119 + ZNF385D chr3 22169035 - Exonic hg38 PRAD TCGA-YJ-A8SW-01A 3 3 CDS-5'UTR Intra-chr p22.3 p24.3 Transcription factor 99945 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCHSD2-C2CD3 FCHSD2 chr11 73140031 - C2CD3 chr11 74139828 - Exonic hg38 PRAD TCGA-YJ-A8SW-01A 2 6 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 99946 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFB5-NAALADL2 NDUFB5 chr3 179618521 + NAALADL2 chr3 175233931 + Exonic hg38 PRAD TCGA-YJ-A8SW-01A 3 2 In-Frame Intra-chr q26.33 q26.31 99947 ChimerSeq TCGA FAWG TCGA_RNA-Seq SASH1-ADGB SASH1 chr6 148343223 + ADGB chr6 146644773 + Exonic hg38 PRAD TCGA-YJ-A8SW-01A 2 5 In-Frame Intra-chr q24.3 Tumor suppressor gene q24.3 99948 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLK-INA SLK chr10 103967895 + INA chr10 103287035 + Exonic hg38 PRAD TCGA-YJ-A8SW-01A 2 4 In-Frame Intra-chr q24.33 STE:STE20 q24.33 Seq+ 99949 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNIP2-LRAT FNIP2 chr4 158769319 + LRAT chr4 154728703 + Exonic hg38 PRAD TCGA-YJ-A8SW-01A 1 6 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 99950 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF19A-RRM2B RNF19A chr8 100309867 - RRM2B chr8 102218947 - Exonic hg38 PRAD TCGA-YJ-A8SW-01A 1 5 5'UTR-CDS Intra-chr q22.2 q22.3 99951 ChimerSeq TCGA FAWG TCGA_RNA-Seq BEND7-FRMD4A BEND7 chr10 13526138 - FRMD4A chr10 13796588 - Exonic hg38 PRAD TCGA-YJ-A8SW-01A 1 4 Out-of-frame Intra-chr p13 p13 Seq+ 99952 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLG1-BCAR1 GLG1 chr16 74606657 - BCAR1 chr16 75243090 - Exonic hg38 PRAD TCGA-YJ-A8SW-01A 1 3 CDS-5'UTR Intra-chr q23.1 q23.1 99953 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL40-TMCC3 MRPL40 chr22 19433348 + TMCC3 chr12 94582538 - Exonic hg38 PRAD TCGA-YL-A8HK-01A 1 12 Out-of-frame Inter-chr q11.21 q22 Seq+ 99954 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARFGAP2-FBRSL1 ARFGAP2 chr11 47166268 - FBRSL1 chr12 132567481 + Exonic hg38 PRAD TCGA-YL-A8HL-01A 5 16 In-Frame Inter-chr p11.2 q24.33 Seq+ 99955 ChimerSeq TCGA FAWG TCGA_RNA-Seq HAUS8-SGTA HAUS8 chr19 17073274 - SGTA chr19 2759294 - Exonic hg38 PRAD TCGA-YL-A8HL-01A 1 21 Out-of-frame Intra-chr p13.11 p13.3 Seq+ 99956 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT6B-CORO7 KAT6B chr10 75025249 + CORO7 chr16 4395339 - Exonic hg38 PRAD TCGA-YL-A8HL-01A 1 20 3'UTR-5'UTR Inter-chr Oncogene p13.3 Seq+ 99957 ChimerSeq TCGA FAWG TCGA_RNA-Seq CORO7-GFOD2 CORO7 chr16 4405491 - GFOD2 chr16 67676053 - Exonic hg38 PRAD TCGA-YL-A8HL-01A 1 14 5'UTR-CDS Intra-chr p13.3 q22.1 Seq+ 99958 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRF1-PPP2R5A NRF1 chr7 129717376 + PPP2R5A chr1 212329135 + Exonic hg38 PRAD TCGA-YL-A8HL-01A 2 5 Out-of-frame Inter-chr q32.2 Tumor suppressor gene Transcription factor q32.3 Seq+ 99959 ChimerSeq TCGA FAWG TCGA_RNA-Seq C11orf49-NUP98 C11orf49 chr11 47161190 + NUP98 chr11 3713995 - Exonic hg38 PRAD TCGA-YL-A8HL-01A 2 3 In-Frame Intra-chr p11.2 p15.4 Oncogene Tumor suppressor gene Seq+ 99960 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP170-IFI16 CEP170 chr1 243255040 - IFI16 chr1 159010003 + Exonic hg38 PRAD TCGA-YL-A8HM-01A 6 16 5'UTR-5'UTR Intra-chr q23.1 Tumor suppressor gene Seq+ 99961 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELAVL2-CFTR ELAVL2 chr9 23825806 - CFTR chr7 117664688 + Exonic hg38 PRAD TCGA-YL-A8HM-01A 2 22 5'UTR-CDS Inter-chr p21.3 q31.2 Tumor suppressor gene Seq+ 99962 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMED10-PSMD11 TMED10 chr14 75147664 - PSMD11 chr17 32446945 + Exonic hg38 PRAD TCGA-YL-A8HM-01A 4 3 Out-of-frame Inter-chr q24.3 q11.2 Seq+ 99963 ChimerSeq TCGA FAWG TCGA_RNA-Seq MFGE8-RLBP1 MFGE8 chr15 88905757 - RLBP1 chr15 89210809 - Exonic hg38 PRAD TCGA-YL-A8HM-01A 2 9 Out-of-frame Intra-chr q26.1 q26.1 Seq+ 99964 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHC2-HSP90AA1 PHC2 chr1 33328870 - HSP90AA1 chr14 102102085 - Exonic hg38 PRAD TCGA-YL-A8HM-01A 3 4 Out-of-frame Inter-chr p35.1 q32.31 Oncogene Seq+ 99965 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDLRAD4-NOVA1 LDLRAD4 chr18 13278188 + NOVA1 chr14 26480143 - Exonic hg38 PRAD TCGA-YL-A8HM-01A 1 9 5'UTR-5'UTR Inter-chr p11.21 q12 Seq+ 99966 ChimerSeq TCGA FAWG TCGA_RNA-Seq LARP4-HPD LARP4 chr12 50430570 + HPD chr12 121847214 - Exonic hg38 PRAD TCGA-YL-A8HO-01A 6 9 In-Frame Intra-chr q13.12 q24.31 Seq+ 99967 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFF3-HDAC5 AFF3 chr2 100006632 - HDAC5 chr17 44117704 - Exonic hg38 PRAD TCGA-YL-A8HO-01A 1 2 CDS-5'UTR Inter-chr q11.2 Oncogene q21.31 Seq+ 99968 ChimerSeq TCGA FAWG TCGA_RNA-Seq BANK1-GSTCD BANK1 chr4 102043907 + GSTCD chr4 105822954 + Exonic hg38 PRAD TCGA-YL-A8S8-01A 41 204 In-Frame Intra-chr q24 q24 Seq+ 99969 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM171B-KYNU FAM171B chr2 186694411 + KYNU chr2 142885349 + Exonic hg38 PRAD TCGA-YL-A8S8-01A 6 40 CDS-5'UTR Intra-chr q32.1 q22.2 Seq+ 99970 ChimerSeq TCGA FAWG TCGA_RNA-Seq YTHDC1-TMPRSS11F YTHDC1 chr4 68338283 - TMPRSS11F chr4 68074009 - Exonic hg38 PRAD TCGA-YL-A8S8-01A 5 17 5'UTR-CDS Intra-chr q13.2 Seq+ 99971 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLG2-CARD17 DLG2 chr11 83541682 - CARD17 chr11 105099421 - Exonic hg38 PRAD TCGA-YL-A8S8-01A 3 7 Out-of-frame Intra-chr q14.1 q22.3 Seq+ 99972 ChimerSeq TCGA FAWG TCGA_RNA-Seq TERF2IP-AMY1C TERF2IP chr16 75648552 + AMY1C chr1 103758469 + Exonic hg38 PRAD TCGA-YL-A8S9-01A 74 186 Out-of-frame Inter-chr q23.1 p21.1 99973 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR89B-HOOK3 GPR89B chr1 147944098 + HOOK3 chr8 42925557 + Exonic hg38 PRAD TCGA-YL-A8S9-01A 6 12 Out-of-frame Inter-chr q21.2 p11.21 Oncogene 99974 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC24A-C10orf11 SEC24A chr5 134649173 + C10orf11 chr10 76036008 + Exonic hg38 PRAD TCGA-YL-A8SA-01A 13 23 Out-of-frame Inter-chr q31.1 Seq+ 99975 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTEN-GRID1 PTEN chr10 87931089 + GRID1 chr10 85729614 - Exonic hg38 PRAD TCGA-YL-A8SA-01A 12 19 3'UTR-CDS Intra-chr q23.31 Oncogene Tumor suppressor gene q23.2 Seq+ 99976 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD9-LASP1 BTBD9 chr6 38639800 - LASP1 chr17 38878086 + Exonic hg38 PRAD TCGA-YL-A8SA-01A 4 15 5'UTR-5'UTR Inter-chr p21.2 q12 Seq+ 99977 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXP1-HRH1 FOXP1 chr3 71198202 - HRH1 chr3 11259003 + Exonic hg38 PRAD TCGA-YL-A8SA-01A 1 3 CDS-5'UTR Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor p25.3 Seq+ 99978 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP12-SVIL ARHGAP12 chr10 31826304 - SVIL chr10 29686651 - Exonic hg38 PRAD TCGA-YL-A8SA-01A 1 2 CDS-5'UTR Intra-chr p11.22 p11.23 Seq+ 99979 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCX-ZNF627 SCX chr8 144268444 + ZNF627 chr19 11617054 + Exonic hg38 PRAD TCGA-YL-A8SB-01A 16 38 Out-of-frame Inter-chr q24.3 Transcription factor p13.2 Transcription factor 99980 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAF1-TMEM205 MAF1 chr8 144106464 + TMEM205 chr19 11345628 - Exonic hg38 PRAD TCGA-YL-A8SB-01A 9 33 CDS-5'UTR Inter-chr q24.3 p13.2 Seq+ 99981 ChimerSeq TCGA FAWG TCGA_RNA-Seq MINK1-SIGLEC17P MINK1 chr17 4833640 + SIGLEC17P chr19 51167375 + Exonic hg38 PRAD TCGA-YL-A8SB-01A 4 21 5'UTR-5'UTR Inter-chr p13.2 q13.41 Seq+ 99982 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCP2-TMPRSS2 SCP2 chr1 53039046 + TMPRSS2 chr21 41489593 - Exonic hg38 PRAD TCGA-YL-A8SC-01A 2 23 In-Frame Inter-chr p32.3 q22.3 Seq+ 99983 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYOZ2-PNKD MYOZ2 chr4 119136601 + PNKD chr2 218317955 + Exonic hg38 PRAD TCGA-YL-A8SC-01A 2 5 CDS-5'UTR Inter-chr q26 q35 99984 ChimerSeq TCGA FAWG TCGA_RNA-Seq FUBP1-DNAJB4 FUBP1 chr1 77978885 - DNAJB4 chr1 78013051 + Exonic hg38 PRAD TCGA-YL-A8SF-01A 15 5 Out-of-frame Intra-chr p31.1 Oncogene p31.1 Tumor suppressor gene Seq+ 99985 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFWD2-MSH4 RFWD2 chr1 176149006 - MSH4 chr1 75912696 + Exonic hg38 PRAD TCGA-YL-A8SF-01A 1 5 Out-of-frame Intra-chr q25.2 Tumor suppressor gene p31.1 Seq+ 99986 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASKIN2-PDE2A CASKIN2 chr17 75513711 - PDE2A chr11 72642326 - Exonic hg38 PRAD TCGA-YL-A8SF-01A 1 2 Out-of-frame Inter-chr q25.1 q13.4 99987 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRC1-SPINK6 PRRC1 chr5 127517776 + SPINK6 chr5 148214905 + Exonic hg38 PRAD TCGA-YL-A8SH-01B 8 21 5'UTR-CDS Intra-chr q23.2 q32 Seq+ 99988 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF3E-PHF20L1 EIF3E chr8 108228267 - PHF20L1 chr8 132794410 + Exonic hg38 PRAD TCGA-YL-A8SH-01B 2 6 In-Frame Intra-chr q23.1 q24.22 Seq+ 99989 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNND1-DTX4 CTNND1 chr11 57762046 + DTX4 chr11 59181739 + Exonic hg38 PRAD TCGA-YL-A8SH-01B 1 4 5'UTR-5'UTR Intra-chr q12.1 Tumor suppressor gene q12.1 Seq+ 99990 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGN2P46-PRKCI HMGN2P46 chr15 45513963 + PRKCI chr3 170291854 + Exonic hg38 PRAD TCGA-YL-A8SJ-01B 19 273 5'UTR-CDS Inter-chr q21.1 q26.2 Seq+ 99991 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53INP1-CCDC144B TP53INP1 chr8 94930540 - CCDC144B chr17 18554266 - Exonic hg38 PRAD TCGA-YL-A8SJ-01B 9 11 3'UTR-3'UTR Inter-chr q22.1 Tumor suppressor gene p11.2 99992 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARPC1A-VAMP4 ARPC1A chr7 99326004 + VAMP4 chr1 171738463 - Exonic hg38 PRAD TCGA-YL-A8SJ-01B 3 9 5'UTR-5'UTR Inter-chr q22.1 q24.3 Seq+ 99993 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP32-PRDM10 ARHGAP32 chr11 129093621 - PRDM10 chr11 129912225 - Exonic hg38 PRAD TCGA-YL-A8SK-01B 5 4 In-Frame Intra-chr q24.3 q24.3 Transcription factor Seq+ 99994 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD13C-FZR1 ANKRD13C chr1 70324853 - FZR1 chr19 3522956 + Exonic hg38 PRAD TCGA-YL-A8SK-01B 1 4 CDS-5'UTR Inter-chr p31.1 p13.3 Oncogene Tumor suppressor gene Seq+ 99995 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP350-LEPROT CEP350 chr1 180078674 + LEPROT chr1 65431803 + Exonic hg38 PRAD TCGA-YL-A8SL-01B 4 13 In-Frame Intra-chr q25.2 p31.3 Seq+ 99996 ChimerSeq TCGA FAWG TCGA_RNA-Seq CR1L-C1orf116 CR1L chr1 207701618 + C1orf116 chr1 207027679 - Exonic hg38 PRAD TCGA-YL-A8SL-01B 1 13 CDS-5'UTR Intra-chr q32.2 q32.1 Seq+ 99997 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELP3-FZD3 ELP3 chr8 28093233 + FZD3 chr8 28520638 + Exonic hg38 PRAD TCGA-YL-A8SO-01B 8 11 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 99998 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFX7-DYX1C1 RFX7 chr15 56243125 - DYX1C1 chr15 55450367 - Exonic hg38 PRAD TCGA-YL-A8SO-01B 3 7 Out-of-frame Intra-chr q21.3 Transcription factor Seq+ 99999 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2C-FUT9 KMT2C chr7 152251939 - FUT9 chr6 96203148 + Exonic hg38 PRAD TCGA-YL-A8SP-01B 4 17 CDS-5'UTR Inter-chr q36.1 Oncogene Tumor suppressor gene q16.1 Seq+ 100000 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYB5R4-FNDC1 CYB5R4 chr6 83864328 + FNDC1 chr6 159197431 + Exonic hg38 PRAD TCGA-YL-A8SP-01B 2 2 In-Frame Intra-chr q14.2 q25.3 Seq+ 100001 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRYL-OCIAD2 FRYL chr4 48684673 - OCIAD2 chr4 48904611 - Exonic hg38 PRAD TCGA-YL-A8SP-01B 1 6 5'UTR-5'UTR Intra-chr p11 p11 Seq+ 100002 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2N-APPL2 UBE2N chr12 93441855 - APPL2 chr12 105229223 - Exonic hg38 PRAD TCGA-YL-A8SP-01B 1 6 In-Frame Intra-chr q22 q23.3 Seq+ 100003 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZSCAN22-NOSIP ZSCAN22 chr19 58327114 + NOSIP chr19 49560692 - Exonic hg38 PRAD TCGA-YL-A8SP-01B 1 5 5'UTR-5'UTR Intra-chr q13.43 Transcription factor q13.33 100004 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP11A-DHRS12 ATP11A chr13 112862575 + DHRS12 chr13 51791257 - Exonic hg38 PRAD TCGA-YL-A8SQ-01B 4 10 In-Frame Intra-chr q34 q14.3 Seq+ 100005 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM47-IDO2 RBM47 chr4 40514516 - IDO2 chr8 39949149 + Exonic hg38 PRAD TCGA-YL-A8SR-01B 8 57 5'UTR-CDS Inter-chr p14 p11.21 Seq+ 100006 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF292-EYS ZNF292 chr6 87155759 + EYS chr6 65495993 - Exonic hg38 PRAD TCGA-YL-A8SR-01B 6 24 5'UTR-5'UTR Intra-chr q14.3 Tumor suppressor gene Transcription factor q12 Seq+ 100007 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATAD2B-LELP1 GATAD2B chr1 153922733 - LELP1 chr1 153204687 + Exonic hg38 PRAD TCGA-YL-A8SR-01B 4 11 5'UTR-5'UTR Intra-chr Transcription factor q21.3 Seq+ 100008 ChimerSeq TCGA FAWG TCGA_RNA-Seq EYS-ADGRB3 EYS chr6 65295863 - ADGRB3 chr6 69324872 + Exonic hg38 PRAD TCGA-YL-A8SR-01B 1 6 Out-of-frame Intra-chr q12 q12 Oncogene 100009 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC6-HOXA1 TTC6 chr14 37596008 + HOXA1 chr7 27095355 - Exonic hg38 PRAD TCGA-YL-A9WH-01A 28 79 5'UTR-CDS Inter-chr q21.1 p15.2 Transcription factor Seq+ 100010 ChimerSeq TCGA FAWG TCGA_RNA-Seq HERC1-SNX6 HERC1 chr15 63833827 - SNX6 chr14 34563175 - Exonic hg38 PRAD TCGA-YL-A9WH-01A 3 31 5'UTR-CDS Inter-chr q22.31 q13.1 Seq+ 100011 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNKS2-HECTD2 TNKS2 chr10 91842391 + HECTD2 chr10 91460427 + Exonic hg38 PRAD TCGA-YL-A9WH-01A 4 17 In-Frame Intra-chr q23.32 q23.32 Seq+ 100012 ChimerSeq TCGA FAWG TCGA_RNA-Seq VWDE-HOTAIRM1 VWDE chr7 12367357 - HOTAIRM1 chr7 27099779 + Exonic hg38 PRAD TCGA-YL-A9WH-01A 2 12 CDS-5'UTR Intra-chr p21.3 p15.2 Seq+ 100013 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP6-ACACB SENP6 chr6 75623958 + ACACB chr12 109242435 + Exonic hg38 PRAD TCGA-YL-A9WJ-01A 20 46 Out-of-frame Inter-chr q14.1 q24.11 Seq+ 100014 ChimerSeq TCGA FAWG TCGA_RNA-Seq TESC-ASAH1 TESC chr12 117099225 - ASAH1 chr8 18075587 - Exonic hg38 PRAD TCGA-YL-A9WJ-01A 20 35 Out-of-frame Inter-chr q24.22 p22 Seq+ 100015 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCNP-ATR PCNP chr3 101580004 + ATR chr3 142466533 - Exonic hg38 PRAD TCGA-YL-A9WK-01A 23 68 In-Frame Intra-chr q12.3 q23 Atypical:PIKK Oncogene Tumor suppressor gene Seq+ 100016 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHD1-BATF2 EHD1 chr11 64874421 - BATF2 chr11 64994549 - Exonic hg38 PRAD TCGA-YL-A9WK-01A 2 7 Out-of-frame Intra-chr q13.1 q13.1 Tumor suppressor gene Transcription factor Seq+ 100017 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFHX3-ENY2 ZFHX3 chr16 72811577 - ENY2 chr8 109343405 + Exonic hg38 PRAD TCGA-YL-A9WL-01A 28 459 Out-of-frame Inter-chr q22.3 Tumor suppressor gene Transcription factor q23.1 Seq+ 100018 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBD3-GAK MBD3 chr19 1592618 - GAK chr4 877809 - Exonic hg38 PRAD TCGA-YL-A9WL-01A 46 76 In-Frame Inter-chr p13.3 Transcription factor p16.3 Other:NAK Seq+ 100019 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF38-ZNF622 ARHGEF38 chr4 105552961 + ZNF622 chr5 16463742 - Exonic hg38 PRAD TCGA-YL-A9WL-01A 17 62 In-Frame Inter-chr q24 p15.1 Seq+ 100020 ChimerSeq TCGA FAWG TCGA_RNA-Seq URI1-WDR88 URI1 chr19 29942664 + WDR88 chr19 33164197 + Exonic hg38 PRAD TCGA-YL-A9WL-01A 14 58 In-Frame Intra-chr q12 q13.11 Seq+ 100021 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAK-MEX3D GAK chr4 881907 - MEX3D chr19 1556923 - Exonic hg38 PRAD TCGA-YL-A9WL-01A 14 30 Out-of-frame Inter-chr p16.3 Other:NAK p13.3 Seq+ 100022 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENY2-NSF ENY2 chr8 109340563 + NSF chr17 46674414 + Exonic hg38 PRAD TCGA-YL-A9WL-01A 4 14 CDS-3'UTR Inter-chr q23.1 Seq+ 100023 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL6ST-LAMC2 IL6ST chr5 55951464 - LAMC2 chr1 183207881 + Exonic hg38 PRAD TCGA-YL-A9WL-01A 6 5 In-Frame Inter-chr q11.2 Oncogene q25.3 Seq+ 100024 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCD5-ANTXR2 SCD5 chr4 82798306 - ANTXR2 chr4 80018976 - Exonic hg38 PRAD TCGA-YL-A9WL-01A 4 7 Out-of-frame Intra-chr q21.22 q21.21 Seq+ 100025 ChimerSeq TCGA FAWG TCGA_RNA-Seq BIRC6-EML4 BIRC6 chr2 32549481 + EML4 chr2 42288227 + Exonic hg38 PRAD TCGA-YL-A9WL-01A 2 9 Out-of-frame Intra-chr p22.3 p21 Oncogene Seq+ 100026 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKIV2L2-BASP1 SKIV2L2 chr5 55416132 + BASP1 chr5 17275208 + Exonic hg38 PRAD TCGA-YL-A9WL-01A 1 7 Out-of-frame Intra-chr q11.2 p15.1 Tumor suppressor gene Seq+ 100027 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF7IP-TXNRD1 ATF7IP chr12 14385400 + TXNRD1 chr12 104251527 + Exonic hg38 PRAD TCGA-YL-A9WL-01A 1 5 Out-of-frame Intra-chr p13.1 q23.3 Seq+ 100028 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND6A-FHIT DENND6A chr3 57692782 - FHIT chr3 59922414 - Exonic hg38 PRAD TCGA-YL-A9WL-01A 1 3 In-Frame Intra-chr p14.3 p14.2 Tumor suppressor gene 100029 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A3-ERG SLC45A3 chr1 205680394 - ERG chr21 38445621 - Exonic hg38 PRAD TCGA-YL-A9WX-01A 4 15 5'UTR-CDS Inter-chr q32.1 q22.2 Oncogene Transcription factor KB Pub Seq+ 100030 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSPP1-CPA6 CSPP1 chr8 67064496 + CPA6 chr8 67434240 - Exonic hg38 PRAD TCGA-YL-A9WY-01A 12 117 Out-of-frame Intra-chr q13.1 q13.2 Seq+ 100031 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP6NL-ANKRD16 USP6NL chr10 11597631 - ANKRD16 chr10 5862691 - Exonic hg38 PRAD TCGA-YL-A9WY-01A 11 33 3'UTR-3'UTR Intra-chr p14 p15.1 Seq+ 100032 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSFP1-ATP6V0E1 NSFP1 chr17 46412870 + ATP6V0E1 chr5 173020238 + Exonic hg38 PRAD TCGA-YL-A9WY-01A 5 28 3'UTR-CDS Inter-chr q35.1 100033 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP10-GID4 AKAP10 chr17 19936286 - GID4 chr17 18058868 + Exonic hg38 PRAD TCGA-YL-A9WY-01A 4 16 In-Frame Intra-chr p11.2 p11.2 Seq+ 100034 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKIB1-CDK14 ANKIB1 chr7 92246519 + CDK14 chr7 91207165 + Exonic hg38 PRAD TCGA-YL-A9WY-01A 4 16 5'UTR-3'UTR Intra-chr q21.2 q21.13 Seq+ 100035 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3R1-MRPL42 PIK3R1 chr5 68227009 + MRPL42 chr12 93469189 + Exonic hg38 PRAD TCGA-YL-A9WY-01A 1 15 CDS-5'UTR Inter-chr q13.1 Oncogene q22 Seq+ 100036 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP6NL-GDI2 USP6NL chr10 11597631 - GDI2 chr10 5800705 - Exonic hg38 PRAD TCGA-YL-A9WY-01A 2 8 Out-of-frame Intra-chr p14 p15.1 Seq+ 100037 ChimerSeq TCGA FAWG TCGA_RNA-Seq JADE2-SGCD JADE2 chr5 134538083 + SGCD chr5 156329534 + Exonic hg38 PRAD TCGA-YL-A9WY-01A 2 5 CDS-5'UTR Intra-chr q31.1 q33.2 100038 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-TNFRSF19 PVT1 chr8 127890998 + TNFRSF19 chr13 23667980 + Exonic hg38 PRAD TCGA-ZG-A8QW-01A 3 10 5'UTR-CDS Inter-chr q24.21 q12.12 Seq+ 100039 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAPGEF2-RAB3IP RAPGEF2 chr4 159193256 + RAB3IP chr12 69794437 + Exonic hg38 PRAD TCGA-ZG-A8QW-01A 1 9 Out-of-frame Inter-chr q32.1 q15 Seq+ 100040 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS26A-AGBL4 VPS26A chr10 69158211 + AGBL4 chr1 49045800 - Exonic hg38 PRAD TCGA-ZG-A8QW-01A 1 8 In-Frame Inter-chr q22.1 p33 Seq+ 100041 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASA1-FAM174A RASA1 chr5 87353235 + FAM174A chr5 100562054 + Exonic hg38 PRAD TCGA-ZG-A8QX-01A 7 20 Out-of-frame Intra-chr q14.3 q21.1 Seq+ 100042 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB10-ZPBP GRB10 chr7 50732272 - ZPBP chr7 49937622 - Exonic hg38 PRAD TCGA-ZG-A8QX-01A 5 22 Out-of-frame Intra-chr p12.1 p12.2 Seq+ 100043 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYB561D2-ERC2 CYB561D2 chr3 50350982 + ERC2 chr3 56019033 - Exonic hg38 PRAD TCGA-ZG-A8QY-01A 3 25 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p14.3 Seq+ 100044 ChimerSeq TCGA FAWG TCGA_RNA-Seq UTP20-SCYL2 UTP20 chr12 101319635 + SCYL2 chr12 100334166 + Exonic hg38 PRAD TCGA-ZG-A8QY-01A 4 3 In-Frame Intra-chr q23.2 q23.1 Other:SCY1 Seq+ 100045 ChimerSeq TCGA FAWG TCGA_RNA-Seq RLIM-FTX RLIM chrX 74614422 - FTX chrX 74130947 - Exonic hg38 PRAD TCGA-ZG-A8QY-01A 1 8 5'UTR-3'UTR Intra-chr q13.2 q13.2 100046 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERC2-ELP6 ERC2 chr3 55992057 - ELP6 chr3 47498432 - Exonic hg38 PRAD TCGA-ZG-A8QY-01A 2 2 Out-of-frame Intra-chr p14.3 p21.31 100047 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD5-GADL1 SETD5 chr3 9397977 + GADL1 chr3 30857141 - Exonic hg38 PRAD TCGA-ZG-A8QZ-01A 23 47 5'UTR-CDS Intra-chr p25.3 p23 Seq+ 100048 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNLT1-DUSP15 DYNLT1 chr6 158641319 - DUSP15 chr20 31869597 - Exonic hg38 PRAD TCGA-ZG-A8QZ-01A 5 26 In-Frame Inter-chr q25.3 q11.21 Seq+ 100049 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHRS12-TSC22D1 DHRS12 chr13 51804054 - TSC22D1 chr13 44436095 - Exonic hg38 PRAD TCGA-ZG-A8QZ-01A 3 10 In-Frame Intra-chr q14.3 q14.11 Tumor suppressor gene Transcription factor Seq+ 100050 ChimerSeq TCGA FAWG TCGA_RNA-Seq ORC5-R3HDM2 ORC5 chr7 104195143 - R3HDM2 chr12 57395818 - Exonic hg38 PRAD TCGA-ZG-A8QZ-01A 3 8 CDS-5'UTR Inter-chr q22.2 q13.3 Seq+ 100051 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNJ2-KIF25 SYNJ2 chr6 157982088 + KIF25 chr6 168038553 + Exonic hg38 PRAD TCGA-ZG-A8QZ-01A 2 9 Out-of-frame Intra-chr q25.3 q27 Seq+ 100052 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSC22D1-CCDC122 TSC22D1 chr13 44573163 - CCDC122 chr13 43874927 - Exonic hg38 PRAD TCGA-ZG-A8QZ-01A 2 8 CDS-5'UTR Intra-chr q14.11 Tumor suppressor gene Transcription factor q14.11 Seq+ 100053 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD6-PTPRT CHD6 chr20 41618340 - PTPRT chr20 42248822 - Exonic hg38 PRAD TCGA-ZG-A9KY-01A 14 9 5'UTR-CDS Intra-chr q12 q13.11 Oncogene Tumor suppressor gene Seq+ 100054 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAST2-ST3GAL3 MAST2 chr1 45882395 + ST3GAL3 chr1 43899541 + Exonic hg38 PRAD TCGA-ZG-A9KY-01A 9 28 In-Frame Intra-chr p34.1 AGC:MAST p34.1 Seq+ 100055 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSK3B-SEMA5B GSK3B chr3 119863419 - SEMA5B chr3 122948709 - Exonic hg38 PRAD TCGA-ZG-A9KY-01A 6 38 In-Frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q21.1 Seq+ 100056 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM2-ANKRD24 R3HDM2 chr12 57395749 - ANKRD24 chr19 4212475 + Exonic hg38 PRAD TCGA-ZG-A9KY-01A 10 22 5'UTR-CDS Inter-chr q13.3 p13.3 Seq+ 100057 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC22-KRBOX4 CCDC22 chrX 49243462 + KRBOX4 chrX 46450431 + Exonic hg38 PRAD TCGA-ZG-A9KY-01A 10 16 CDS-5'UTR Intra-chr p11.23 p11.3 Seq+ 100058 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKT3-ADSS AKT3 chr1 243843125 - ADSS chr1 244437768 - Exonic hg38 PRAD TCGA-ZG-A9KY-01A 6 21 5'UTR-5'UTR Intra-chr AGC:Akt Oncogene q44 Seq+ 100059 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4B-ATCAY KDM4B chr19 5047669 + ATCAY chr19 3902487 + Exonic hg38 PRAD TCGA-ZG-A9KY-01A 5 18 In-Frame Intra-chr p13.3 p13.3 Seq+ 100060 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAF1-TTC39A FAF1 chr1 50655442 - TTC39A chr1 51296170 - Exonic hg38 PRAD TCGA-ZG-A9KY-01A 4 18 In-Frame Intra-chr p32.3 p32.3 Seq+ 100061 ChimerSeq TCGA FAWG TCGA_RNA-Seq EME2-CLUAP1 EME2 chr16 1780667 + CLUAP1 chr16 3530568 + Exonic hg38 PRAD TCGA-ZG-A9KY-01A 4 10 3'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 100062 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-CA4 BCAS3 chr17 60924500 + CA4 chr17 60170551 + Exonic hg38 PRAD TCGA-ZG-A9KY-01A 2 13 CDS-5'UTR Intra-chr q23.2 q23.1 Seq+ 100063 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC57-RAB40B CCDC57 chr17 82151560 - RAB40B chr17 82664556 - Exonic hg38 PRAD TCGA-ZG-A9KY-01A 1 13 In-Frame Intra-chr q25.3 q25.3 Seq+ 100064 ChimerSeq TCGA FAWG TCGA_RNA-Seq GABRB3-TJP1 GABRB3 chr15 26772402 - TJP1 chr15 29800702 - Exonic hg38 PRAD TCGA-ZG-A9KY-01A 2 7 5'UTR-5'UTR Intra-chr q12 Seq+ 100065 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEMT-TOP3A PEMT chr17 17576920 - TOP3A chr17 18280658 - Exonic hg38 PRAD TCGA-ZG-A9KY-01A 1 9 CDS-5'UTR Intra-chr p11.2 Seq+ 100066 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGPS2-RASAL2 RALGPS2 chr1 178821704 + RASAL2 chr1 178390100 + Exonic hg38 PRAD TCGA-ZG-A9KY-01A 2 5 Out-of-frame Intra-chr q25.2 q25.2 Tumor suppressor gene Seq+ 100067 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRCA1-LSM12 BRCA1 chr17 43115726 - LSM12 chr17 44036300 - Exonic hg38 PRAD TCGA-ZG-A9KY-01A 1 6 Out-of-frame Intra-chr q21.31 Oncogene Tumor suppressor gene q21.31 Seq+ 100068 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA4B-PIAS1 SEMA4B chr15 90185081 + PIAS1 chr15 68187542 + Exonic hg38 PRAD TCGA-ZG-A9KY-01A 1 3 5'UTR-CDS Intra-chr q26.1 q23 Tumor suppressor gene Seq+ 100069 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTX2-POR DTX2 chr7 76463709 + POR chr7 75953989 + Exonic hg38 PRAD TCGA-ZG-A9KY-01A 1000 1000 3'UTR-5'UTR Intra-chr q11.23 Seq+ 100070 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTMR2-TCP11L1 MTMR2 chr11 95914242 - TCP11L1 chr11 33072474 + Exonic hg38 PRAD TCGA-ZG-A9L0-01A 2 21 5'UTR-CDS Intra-chr q21 p13 Seq+ 100071 ChimerSeq TCGA FAWG TCGA_RNA-Seq PERP-CASK PERP chr6 138107127 - CASK chrX 41787283 - Exonic hg38 PRAD TCGA-ZG-A9L1-01A 10 9 In-Frame Inter-chr q23.3 p11.4 CAMK:CASK Seq+ 100072 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUX1-YEATS2 CUX1 chr7 101816093 + YEATS2 chr3 183772305 + Exonic hg38 PRAD TCGA-ZG-A9L1-01A 1 35 In-Frame Inter-chr q22.1 Tumor suppressor gene Transcription factor q27.1 Seq+ 100073 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAF4-TTC6 SCAF4 chr21 31731663 - TTC6 chr14 37968445 + Exonic hg38 PRAD TCGA-ZG-A9L1-01A 1 3 CDS-3'UTR Inter-chr q22.11 q21.1 100074 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-PDE9A TMPRSS2 chr21 41494356 - PDE9A chr21 42743776 + Exonic hg38 PRAD TCGA-ZG-A9L2-01A 22 56 In-Frame Intra-chr q22.3 q22.3 Seq+ 100075 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE9A-TMPRSS2 PDE9A chr21 42733426 + TMPRSS2 chr21 41498189 - Exonic hg38 PRAD TCGA-ZG-A9L2-01A 17 40 In-Frame Intra-chr q22.3 q22.3 Seq+ 100076 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM210A-PSMG2 FAM210A chr18 13726329 - PSMG2 chr18 12712702 + Exonic hg38 PRAD TCGA-ZG-A9L2-01A 9 20 5'UTR-CDS Intra-chr p11.21 p11.21 Seq+ 100077 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMG2-SETMAR PSMG2 chr18 12706721 + SETMAR chr3 4312898 + Exonic hg38 PRAD TCGA-ZG-A9L2-01A 6 26 Out-of-frame Inter-chr p11.21 p26.1 Seq+ 100078 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL6ST-DDX4 IL6ST chr5 55976215 - DDX4 chr5 55738950 + Exonic hg38 PRAD TCGA-ZG-A9L2-01A 3 34 5'UTR-5'UTR Intra-chr q11.2 Oncogene q11.2 Seq+ 100079 ChimerSeq TCGA FAWG TCGA_RNA-Seq IP6K1-HYAL3 IP6K1 chr3 49786354 - HYAL3 chr3 50293515 - Exonic hg38 PRAD TCGA-ZG-A9L2-01A 2 24 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 100080 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC45A2-CCDC125 SLC45A2 chr5 33982236 - CCDC125 chr5 69285467 - Exonic hg38 PRAD TCGA-ZG-A9L4-01A 7 13 5'UTR-5'UTR Intra-chr p13.2 Seq+ 100081 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITFG1-SLC45A2 ITFG1 chr16 47311240 - SLC45A2 chr5 33964016 - Exonic hg38 PRAD TCGA-ZG-A9L4-01A 1 18 CDS-5'UTR Inter-chr q12.1 p13.2 Seq+ 100082 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYL6-WDR13 MYL6 chr12 56160320 + WDR13 chrX 48601784 + Exonic hg38 PRAD TCGA-ZG-A9L4-01A 1 2 Out-of-frame Inter-chr q13.2 p11.23 100083 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ETV5 TMPRSS2 chr21 41494356 - ETV5 chr3 186105942 - Exonic hg38 PRAD TCGA-ZG-A9L5-01A 433 1532 CDS-5'UTR Inter-chr q22.3 q27.2 Oncogene Transcription factor KB Pub Seq+ 100084 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-DGKG TMPRSS2 chr21 41494356 - DGKG chr3 186105942 - Exonic hg38 PRAD TCGA-ZG-A9L5-01A 433 1441 CDS-3'UTR Inter-chr q22.3 q27.3 Seq+ 100085 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1E-C9orf3 MYO1E chr15 59256284 - C9orf3 chr9 95060694 + Exonic hg38 PRAD TCGA-ZG-A9L5-01A 19 70 Out-of-frame Inter-chr q22.2 q22.32 Seq+ 100086 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYL6-TPM3P9 MYL6 chr12 56162331 + TPM3P9 chr19 53439828 + Exonic hg38 PRAD TCGA-ZG-A9L5-01A 9 64 Out-of-frame Inter-chr q13.2 q13.42 Seq+ 100087 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2A2-MYO1E GTF2A2 chr15 59657406 - MYO1E chr15 59236672 - Exonic hg38 PRAD TCGA-ZG-A9L5-01A 2 56 5'UTR-CDS Intra-chr q22.2 q22.2 Seq+ 100088 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCC2-RHPN2 SMARCC2 chr12 56163580 - RHPN2 chr19 33026632 - Exonic hg38 PRAD TCGA-ZG-A9L5-01A 8 13 3'UTR-CDS Inter-chr q13.2 q13.11 100089 ChimerSeq TCGA FAWG TCGA_RNA-Seq MROH1-PKMYT1 MROH1 chr8 144200541 + PKMYT1 chr16 2977031 - Exonic hg38 PRAD TCGA-ZG-A9L5-01A 2 19 In-Frame Inter-chr q24.3 p13.3 Seq+ 100090 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF761-SARNP ZNF761 chr19 53449638 + SARNP chr12 55803728 - Exonic hg38 PRAD TCGA-ZG-A9L5-01A 2 12 Out-of-frame Inter-chr q13.42 Transcription factor q13.2 100091 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMP2-NKAP LAMP2 chrX 120469106 - NKAP chrX 119930165 - Exonic hg38 PRAD TCGA-ZG-A9L5-01A 2 11 Out-of-frame Intra-chr q24 q24 Seq+ 100092 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK3-SLC9A5 DOCK3 chr3 50841715 + SLC9A5 chr16 67270738 + Exonic hg38 PRAD TCGA-ZG-A9L5-01A 1 3 In-Frame Inter-chr p21.2 q22.1 Seq+ 100093 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYL6-ZNF761 MYL6 chr12 56162331 + ZNF761 chr19 53445001 + Exonic hg38 PRAD TCGA-ZG-A9L5-01A 1 2 3'UTR-5'UTR Inter-chr q13.2 q13.42 Transcription factor 100094 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF140-ZNF268 ZNF140 chr12 133106866 + ZNF268 chr12 133209693 + Exonic hg38 PRAD TCGA-ZG-A9L5-01A 1000 1000 Out-of-frame Intra-chr q24.33 Transcription factor q24.33 Transcription factor 100095 ChimerSeq TCGA FAWG TCGA_RNA-Seq COA1-GCK COA1 chr7 43729429 - GCK chr7 44153463 - Exonic hg38 PRAD TCGA-ZG-A9L6-01A 1 9 5'UTR-CDS Intra-chr p13 p13 STE:STE20 100096 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFAP2A-CDK5RAP1 TFAP2A chr6 10402492 - CDK5RAP1 chr20 33370629 - Exonic hg38 PRAD TCGA-ZG-A9L9-01A 3 5 In-Frame Inter-chr p24.3 Tumor suppressor gene Transcription factor q11.21 Seq+ 100097 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM35A-PTEN FAM35A chr10 87095248 + PTEN chr10 87925513 + Exonic hg38 PRAD TCGA-ZG-A9L9-01A 3 3 Out-of-frame Intra-chr q23.2 q23.31 Oncogene Tumor suppressor gene Seq+ 100098 ChimerSeq TCGA FAWG TCGA_RNA-Seq LSM1-ASH2L LSM1 chr8 38171965 - ASH2L chr8 38106378 + Exonic hg38 PRAD TCGA-ZG-A9LB-01A 1 4 Out-of-frame Intra-chr p11.23 p11.23 100099 ChimerSeq TCGA FAWG TCGA_RNA-Seq OAT-CDYL OAT chr10 124400840 - CDYL chr6 4943546 + Exonic hg38 PRAD TCGA-ZG-A9LB-01A 1 1 Out-of-frame Inter-chr q26.13 p25.1 100100 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K10-ALDH16A1 MAP3K10 chr19 40192713 + ALDH16A1 chr19 49468381 + Exonic hg38 PRAD TCGA-ZG-A9LM-01A 22 35 Out-of-frame Intra-chr q13.2 q13.33 Seq+ 100101 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEFF2-TMPRSS11B TMEFF2 chr2 192179668 - TMPRSS11B chr4 68232416 - Exonic hg38 PRAD TCGA-ZG-A9LM-01A 13 52 In-Frame Inter-chr q32.3 Tumor suppressor gene q13.2 Seq+ 100102 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTI1-C3orf67 TTI1 chr20 38002628 - C3orf67 chr3 58884709 - Exonic hg38 PRAD TCGA-ZG-A9LM-01A 5 5 Out-of-frame Inter-chr q11.23 p14.2 Seq+ 100103 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACPP-RPL7P16 ACPP chr3 132317576 + RPL7P16 chr3 132244259 - Exonic hg38 PRAD TCGA-ZG-A9LN-01A 7 56 Out-of-frame Intra-chr q22.1 q22.1 100104 ChimerSeq TCGA FAWG TCGA_RNA-Seq EYA2-PI3 EYA2 chr20 46894987 + PI3 chr20 45175861 + Exonic hg38 PRAD TCGA-ZG-A9LN-01A 3 13 5'UTR-CDS Intra-chr q13.12 q13.12 Seq+ 100105 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL2L12-FLT3LG BCL2L12 chr19 49670488 + FLT3LG chr19 49486015 + Exonic hg38 PRAD TCGA-ZG-A9LN-01A 3 7 CDS-3'UTR Intra-chr q13.33 q13.33 Seq+ 100106 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERVK3-ZSCAN4 ERVK3 chr19 58306216 + ZSCAN4 chr19 57676041 + Exonic hg38 PRAD TCGA-ZG-A9LN-01A 2 6 Out-of-frame Intra-chr q13.43 Transcription factor 100107 ChimerSeq TCGA FAWG TCGA_RNA-Seq PELP1-YBX2 PELP1 chr17 4703863 - YBX2 chr17 7293538 - Exonic hg38 PRAD TCGA-ZG-A9LN-01A 1 10 Out-of-frame Intra-chr p13.2 p13.1 Transcription factor 100108 ChimerSeq TCGA FAWG TCGA_RNA-Seq NANS-WNK2 NANS chr9 98060997 + WNK2 chr9 93256948 + Exonic hg38 PRAD TCGA-ZG-A9LN-01A 1 9 In-Frame Intra-chr q22.33 q22.31 Tumor suppressor gene 100109 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFL1-CACNA2D3 EFL1 chr15 82252691 - CACNA2D3 chr3 54752599 + Exonic hg38 PRAD TCGA-ZG-A9LN-01A 1 3 Out-of-frame Inter-chr q25.2 p21.1 Tumor suppressor gene 100110 ChimerSeq TCGA FAWG TCGA_RNA-Seq RREB1-WRAP53 RREB1 chr6 7108702 + WRAP53 chr17 7688648 + Exonic hg38 PRAD TCGA-ZG-A9LU-01A 1 9 5'UTR-5'UTR Inter-chr p24.3 Transcription factor p13.1 Seq+ 100111 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF6-VCL ATF6 chr1 161766442 + VCL chr10 74094271 + Exonic hg38 PRAD TCGA-ZG-A9LY-01A 16 20 Out-of-frame Inter-chr q23.3 Transcription factor q22.2 Seq+ 100112 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAB39L-FNDC3A CAB39L chr13 49401133 - FNDC3A chr13 49172043 + Exonic hg38 PRAD TCGA-ZG-A9LY-01A 4 24 5'UTR-5'UTR Intra-chr q14.2 q14.2 Seq+ 100113 ChimerSeq TCGA FAWG TCGA_RNA-Seq VCL-ATF6 VCL chr10 74095855 + ATF6 chr1 161778244 + Exonic hg38 PRAD TCGA-ZG-A9LY-01A 5 5 Out-of-frame Inter-chr q22.2 q23.3 Transcription factor Seq+ 100114 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELK4-VCL ELK4 chr1 205623676 - VCL chr10 74095656 + Exonic hg38 PRAD TCGA-ZG-A9LY-01A 4 7 Out-of-frame Inter-chr q32.1 Transcription factor q22.2 Seq+ 100115 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAU2-C8orf89 STAU2 chr8 73738284 - C8orf89 chr8 73241605 - Exonic hg38 PRAD TCGA-ZG-A9LY-01A 1 17 Out-of-frame Intra-chr q21.11 q21.11 100116 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF6-VMP1 ATF6 chr1 161778320 + VMP1 chr17 59707527 + Exonic hg38 PRAD TCGA-ZG-A9LY-01A 1 11 CDS-5'UTR Inter-chr q23.3 Transcription factor q23.1 100117 ChimerSeq TCGA FAWG TCGA_RNA-Seq LINC-DEPDC1B LINC chr7 131052425 - DEPDC1B chr5 60605856 - Exonic hg38 PRAD TCGA-ZG-A9LZ-01A 57 133 Out-of-frame Inter-chr q12.1 100118 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHQ1-PSMB7 SHQ1 chr3 72848197 - PSMB7 chr9 124405431 - Exonic hg38 PRAD TCGA-ZG-A9LZ-01A 29 182 Out-of-frame Inter-chr p13 Tumor suppressor gene q33.3 Seq+ 100119 ChimerSeq TCGA FAWG TCGA_RNA-Seq CIR1-SCRN3 CIR1 chr2 174395551 - SCRN3 chr2 174399922 + Exonic hg38 PRAD TCGA-ZG-A9LZ-01A 12 43 In-Frame Intra-chr q31.1 q31.1 Seq+ 100120 ChimerSeq TCGA FAWG TCGA_RNA-Seq URI1-PEPD URI1 chr19 29971227 + PEPD chr19 33413643 - Exonic hg38 PRAD TCGA-ZG-A9LZ-01A 3 28 In-Frame Intra-chr q12 q13.11 Seq+ 100121 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF21A-ACSL6 PHF21A chr11 46076754 - ACSL6 chr5 131973400 - Exonic hg38 PRAD TCGA-ZG-A9LZ-01A 5 9 In-Frame Inter-chr p11.2 Transcription factor q31.1 Seq+ 100122 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNFAIP8-CCNB1IP1 TNFAIP8 chr5 119268907 + CCNB1IP1 chr14 20329373 - Exonic hg38 PRAD TCGA-ZG-A9LZ-01A 1 12 5'UTR-5'UTR Inter-chr q23.1 q11.2 Seq+ 100123 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMYND8-RNF43 ZMYND8 chr20 47347856 - RNF43 chr17 58371033 - Exonic hg38 PRAD TCGA-ZG-A9LZ-01A 1 11 Out-of-frame Inter-chr q13.12 q22 Oncogene Seq+ 100124 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPA2-SORCS2 PPA2 chr4 105456681 - SORCS2 chr4 7396288 + Exonic hg38 PRAD TCGA-ZG-A9LZ-01A 1 10 In-Frame Intra-chr q24 p16.1 Seq+ 100125 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIER3-ABCC12 MIER3 chr5 56933247 - ABCC12 chr16 48096932 - Exonic hg38 PRAD TCGA-ZG-A9LZ-01A 2 5 Out-of-frame Inter-chr q11.2 q12.1 Seq+ 100126 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYCBP2-TAF6L MYCBP2 chr13 77326474 - TAF6L chr11 62782113 + Exonic hg38 PRAD TCGA-ZG-A9LZ-01A 1 3 Out-of-frame Inter-chr q22.3 q12.3 Seq+ 100127 ChimerSeq TCGA FAWG TCGA_RNA-Seq CXADR-HERC1 CXADR chr21 17565611 + HERC1 chr15 63616682 - Exonic hg38 PRAD TCGA-ZG-A9M4-01A 4 12 Out-of-frame Inter-chr q21.1 q22.31 Seq+ 100128 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZCCHC14-IMPA2 ZCCHC14 chr16 87460008 - IMPA2 chr18 11999054 + Exonic hg38 PRAD TCGA-ZG-A9M4-01A 3 7 Out-of-frame Inter-chr q24.2 p11.21 Seq+ 100129 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDLRAD4-CD226 LDLRAD4 chr18 13438384 + CD226 chr18 69873246 - Exonic hg38 PRAD TCGA-ZG-A9M4-01A 2 9 In-Frame Intra-chr p11.21 q22.2 Seq+ 100130 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3R3-MYO18A PIK3R3 chr1 46077515 - MYO18A chr17 29096915 - Exonic hg38 PRAD TCGA-ZG-A9M4-01A 2 2 Out-of-frame Inter-chr p34.1 q11.2 Oncogene Seq+ 100131 ChimerSeq TCGA FAWG TCGA_RNA-Seq JAK1-PDE4B JAK1 chr1 64966333 - PDE4B chr1 65913245 + Exonic hg38 PRAD TCGA-ZG-A9M4-01A 1 2 5'UTR-5'UTR Intra-chr p31.3 TK:JakA Oncogene p31.3 100132 ChimerSeq TCGA FAWG TCGA_RNA-Seq SP3-SLC8A1 SP3 chr2 173954873 - SLC8A1 chr2 40115629 - Exonic hg38 PRAD TCGA-ZG-A9MC-01A 5 25 In-Frame Intra-chr q31.1 Transcription factor p22.1 Seq+ 100133 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC6-POLR3A TTC6 chr14 37596008 + POLR3A chr10 78004888 - Exonic hg38 PRAD TCGA-ZG-A9N3-01A 12 14 5'UTR-CDS Inter-chr q21.1 q22.3 Seq+ 100134 ChimerSeq TCGA FAWG TCGA_RNA-Seq GDE1-TIAL1 GDE1 chr16 19517014 - TIAL1 chr10 119588248 - Exonic hg38 PRAD TCGA-ZG-A9N3-01A 7 25 In-Frame Inter-chr p12.3 q26.11 Seq+ 100135 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR3A-TTC6 POLR3A chr10 78007702 - TTC6 chr14 37841445 + Exonic hg38 PRAD TCGA-ZG-A9N3-01A 6 10 Out-of-frame Inter-chr q22.3 q21.1 Seq+ 100136 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF789-RPL37A ZNF789 chr7 99479787 + RPL37A chr2 216519332 + Exonic hg38 PRAD TCGA-ZG-A9N3-01A 2 16 CDS-3'UTR Inter-chr q22.1 Transcription factor q35 Seq+ 100137 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFB1-PPP4R3A NDUFB1 chr14 92121642 - PPP4R3A chr14 91475966 - Exonic hg38 PRAD TCGA-ZG-A9N3-01A 1 2 5'UTR-CDS Intra-chr q32.12 q32.12 100138 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSG2-TTR DSG2 chr18 31498295 + TTR chr18 31592895 + Exonic hg38 PRAD TCGA-ZG-A9N3-01A 1000 1000 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 100139 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0825-ADGRV1 KIAA0825 chr5 94582433 - ADGRV1 chr5 90828944 + Exonic hg38 PRAD TCGA-ZG-A9ND-01A 3 6 5'UTR-5'UTR Intra-chr q15 q14.3 100140 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC2A13-FAM19A2 SLC2A13 chr12 39830103 - FAM19A2 chr12 61867426 - Exonic hg38 PRAD TCGA-ZG-A9ND-01A 1 2 Out-of-frame Intra-chr q12 q14.1 100141 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK7-SH3BGR CDK7 chr5 69235453 + SH3BGR chr21 39499823 + Exonic hg38 PRAD TCGA-ZG-A9NI-01A 5 9 3'UTR-CDS Inter-chr CMGC:CDK q22.2 Seq+ 100142 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEFF2-RLIM TMEFF2 chr2 192179668 - RLIM chrX 74596000 - Exonic hg38 PRAD TCGA-ZG-A9NI-01A 3 7 CDS-5'UTR Inter-chr q32.3 Tumor suppressor gene q13.2 Seq+ 100143 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAB39-PSMD1 CAB39 chr2 230760115 + PSMD1 chr2 231138736 + Exonic hg38 READ TCGA-AF-2687-01A 8 45 Out-of-frame Intra-chr q37.1 q37.1 Seq+ 100144 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPP5-CEP128 MPP5 chr14 67269783 + CEP128 chr14 80580423 - Exonic hg38 READ TCGA-AF-2690-01A 5 16 5'UTR-CDS Intra-chr q23.3 q31.1 Seq+ 100145 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE4A-INSC UBE4A chr11 118381523 + INSC chr11 15175741 + Exonic hg38 READ TCGA-AF-2690-01A 2 9 In-Frame Intra-chr q23.3 p15.2 Seq+ 100146 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRF-DHRS4 PTPRF chr1 43598913 + DHRS4 chr14 23959902 + Exonic hg38 READ TCGA-AF-2693-01A 13 34 CDS-3'UTR Inter-chr p34.2 q11.2 Seq+ 100147 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRCH1-NUDT15 LRCH1 chr13 46553703 + NUDT15 chr13 48040920 + Exonic hg38 READ TCGA-AF-2693-01A 9 7 Out-of-frame Intra-chr q14.13 q14.2 Seq+ 100148 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13L-COX6A1 MED13L chr12 116237468 - COX6A1 chr12 120438379 + Exonic hg38 READ TCGA-AF-4110-01A 3 11 In-Frame Intra-chr q24.21 q24.31 Seq+ 100149 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF43-HSF5 RNF43 chr17 58415326 - HSF5 chr17 58422430 - Exonic hg38 READ TCGA-AF-5654-01A 1 23 Out-of-frame Intra-chr q22 Oncogene q22 Transcription factor Seq+ 100150 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPUSD2-ZFYVE19 RPUSD2 chr15 40569943 + ZFYVE19 chr15 40812699 + Exonic hg38 READ TCGA-AF-5654-01A 2 5 Out-of-frame Intra-chr q15.1 q15.1 Seq+ 100151 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATB-SH3D19 GATB chr4 151758772 - SH3D19 chr4 151226086 - Exonic hg38 READ TCGA-AF-5654-01A 1 5 CDS-5'UTR Intra-chr q31.3 q31.3 100152 ChimerSeq TCGA FAWG TCGA_RNA-Seq CIB2-ACSBG1 CIB2 chr15 78120568 - ACSBG1 chr15 78208102 - Exonic hg38 READ TCGA-AF-5654-01A 1 3 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 100153 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPLOC4-ALYREF NPLOC4 chr17 81622166 - ALYREF chr17 81888145 - Exonic hg38 READ TCGA-AF-6655-01A 2 12 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 100154 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGD4-CNTN5 FGD4 chr12 32502338 + CNTN5 chr11 99556145 + Exonic hg38 READ TCGA-AF-6655-01A 1 5 5'UTR-5'UTR Inter-chr p11.21 q22.1 Seq+ 100155 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNS4-FBXL20 TNS4 chr17 40501534 - FBXL20 chr17 39343241 - Exonic hg38 READ TCGA-AF-A56L-01A 91 278 5'UTR-CDS Intra-chr q21.2 q12 Seq+ 100156 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-GRB7 FBXL20 chr17 39402173 - GRB7 chr17 39742252 + Exonic hg38 READ TCGA-AF-A56L-01A 62 275 Out-of-frame Intra-chr q12 q12 Seq+ 100157 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOP2A-IKZF3 TOP2A chr17 40411109 - IKZF3 chr17 39766493 - Exonic hg38 READ TCGA-AF-A56L-01A 45 239 Out-of-frame Intra-chr q21.2 q21.1 Tumor suppressor gene Transcription factor Seq+ 100158 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB7-CDK12 GRB7 chr17 39746202 + CDK12 chr17 39544249 + Exonic hg38 READ TCGA-AF-A56L-01A 29 177 3'UTR-3'UTR Intra-chr q12 q12 Oncogene Seq+ 100159 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPNE1-MROH8 CPNE1 chr20 35664760 - MROH8 chr20 37147909 - Exonic hg38 READ TCGA-AF-A56L-01A 24 63 5'UTR-CDS Intra-chr q11.22 q11.23 Seq+ 100160 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM12-MROH8 RBM12 chr20 35664760 - MROH8 chr20 37147909 - Exonic hg38 READ TCGA-AF-A56L-01A 24 63 5'UTR-CDS Intra-chr q11.22 q11.23 Seq+ 100161 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK12-1 CDK12 chr17 39526316 + 1 chr17 41185321 - Exonic hg38 READ TCGA-AF-A56L-01A 17 46 CDS-3'UTR Intra-chr q12 Oncogene 100162 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D16-GOSR2 TBC1D16 chr17 80010160 - GOSR2 chr17 46929520 + Exonic hg38 READ TCGA-AF-A56L-01A 1 45 In-Frame Intra-chr q25.3 q21.32 Seq+ 100163 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPF2-CACNB1 WIPF2 chr17 40219492 + CACNB1 chr17 39187601 - Exonic hg38 READ TCGA-AF-A56L-01A 5 20 5'UTR-CDS Intra-chr q21.2 q12 Seq+ 100164 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMPD3-ATP6V0D1 SMPD3 chr16 68363496 - ATP6V0D1 chr16 67439351 - Exonic hg38 READ TCGA-AF-A56L-01A 5 14 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 100165 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPAA1-GRINA GPAA1 chr8 144084330 + GRINA chr8 143991200 + Exonic hg38 READ TCGA-AG-3731-01A 74 133 CDS-5'UTR Intra-chr q24.3 q24.3 Seq+ 100166 ChimerSeq TCGA FAWG TCGA_RNA-Seq LGALS3-SOCS4 LGALS3 chr14 55142749 + SOCS4 chr14 55048796 + Exonic hg38 READ TCGA-AG-3731-01A 33 230 CDS-3'UTR Intra-chr q22.3 q22.3 100167 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1XR1-STAT3 TBL1XR1 chr3 177197121 - STAT3 chr17 42348539 - Exonic hg38 READ TCGA-AG-3731-01A 38 139 5'UTR-5'UTR Inter-chr q26.32 q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 100168 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAD6-FAM96A SMAD6 chr15 66716498 + FAM96A chr15 64081151 - Exonic hg38 READ TCGA-AG-3731-01A 45 110 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 100169 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL37-SLC52A1 MRPL37 chr1 54205410 + SLC52A1 chr17 5033169 - Exonic hg38 READ TCGA-AG-3731-01A 11 47 Out-of-frame Inter-chr p32.3 p13.2 100170 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT5B-STXBP1 KMT5B chr11 68213477 - STXBP1 chr9 127651603 + Exonic hg38 READ TCGA-AG-3731-01A 14 23 5'UTR-CDS Inter-chr q13.2 q34.11 100171 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM222B-STXBP4 FAM222B chr17 28812209 - STXBP4 chr17 54999345 + Exonic hg38 READ TCGA-AG-3731-01A 14 21 5'UTR-CDS Intra-chr q11.2 q22 100172 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSH1-SVOP SSH1 chr12 108852638 - SVOP chr12 108938955 - Exonic hg38 READ TCGA-AG-3731-01A 10 32 Out-of-frame Intra-chr q24.11 q24.11 Seq+ 100173 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMTA2-LCK CAMTA2 chr17 4987593 - LCK chr1 32279671 + Exonic hg38 READ TCGA-AG-3731-01A 12 16 In-Frame Inter-chr p13.2 Transcription factor p35.2 TK:Src Oncogene Seq+ 100174 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAE1-GRIN2D SAE1 chr19 47131028 + GRIN2D chr19 48441769 + Exonic hg38 READ TCGA-AG-3731-01A 7 31 In-Frame Intra-chr q13.32 q13.33 Seq+ 100175 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAPSS2-SFRP5 PAPSS2 chr10 87745231 + SFRP5 chr10 97769745 - Exonic hg38 READ TCGA-AG-3731-01A 2 14 Out-of-frame Intra-chr q23.2 q24.2 Tumor suppressor gene Seq+ 100176 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPBL-ARNTL2 NIPBL chr5 36972041 + ARNTL2 chr12 27368262 + Exonic hg38 READ TCGA-AG-3731-01A 2 7 In-Frame Inter-chr p13.2 p11.23 Transcription factor Seq+ 100177 ChimerSeq TCGA FAWG TCGA_RNA-Seq POP1-ERICH5 POP1 chr8 98136954 + ERICH5 chr8 98089076 + Exonic hg38 READ TCGA-AG-3731-01A 1 9 Out-of-frame Intra-chr q22.2 q22.2 100178 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL3-NPVF OSBPL3 chr7 24979886 - NPVF chr7 25228357 - Exonic hg38 READ TCGA-AG-3731-01A 1000 1000 5'UTR-CDS Intra-chr p15.3 p15.3 100179 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHG6-TMBIM1 PLEKHG6 chr12 6319108 + TMBIM1 chr2 218282181 - Exonic hg38 READ TCGA-AG-3732-01A 2 35 CDS-5'UTR Inter-chr p13.31 q35 Seq+ 100180 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDR2L-HID1 CDR2L chr17 74988122 + HID1 chr17 74964632 - Exonic hg38 READ TCGA-AG-3732-01A 3 13 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 100181 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53I13-CEP112 TP53I13 chr17 29572057 + CEP112 chr17 66177020 - Exonic hg38 READ TCGA-AG-3732-01A 3 11 Out-of-frame Intra-chr q11.2 q24.1 Seq+ 100182 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-CACNA2D2 PVT1 chr8 127796008 + CACNA2D2 chr3 50384337 - Exonic hg38 READ TCGA-AG-3732-01A 3 8 5'UTR-CDS Inter-chr q24.21 p21.31 Seq+ 100183 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR1204-CACNA2D2 MIR1204 chr8 127796008 + CACNA2D2 chr3 50384337 - Exonic hg38 READ TCGA-AG-3732-01A 3 4 5'UTR-CDS Inter-chr q24.21 p21.31 100184 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGT-SRSF6 PIGT chr20 45419395 + SRSF6 chr20 43463344 + Exonic hg38 READ TCGA-AG-3742-01A 99 374 5'UTR-5'UTR Intra-chr q13.12 q13.11 100185 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIEN1-TEX2 MIEN1 chr17 39730194 - TEX2 chr17 64160933 - Exonic hg38 READ TCGA-AG-3902-01A 4 24 In-Frame Intra-chr q12 q23.3 Seq+ 100186 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFE2L1-FBXL20 NFE2L1 chr17 48048462 + FBXL20 chr17 39343241 - Exonic hg38 READ TCGA-AG-3902-01A 3 3 5'UTR-CDS Intra-chr q21.32 Transcription factor q12 100187 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIC1-KANK1 RIC1 chr9 5629453 + KANK1 chr9 676890 + Exonic hg38 READ TCGA-AG-3902-01A 2 7 CDS-5'UTR Intra-chr p24.1 p24.3 Tumor suppressor gene 100188 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACACA-MED1 ACACA chr17 37358999 - MED1 chr17 39432016 - Exonic hg38 READ TCGA-AG-3902-01A 1 8 5'UTR-CDS Intra-chr q12 Tumor suppressor gene Seq+ 100189 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOMM6-GCLC TOMM6 chr6 41789336 + GCLC chr6 53564889 - Exonic hg38 READ TCGA-AG-4021-01A 6 47 3'UTR-5'UTR Intra-chr p21.1 p12.1 Seq+ 100190 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM33-BCAR3 TRIM33 chr1 114510551 - BCAR3 chr1 93706142 - Exonic hg38 READ TCGA-AG-4021-01A 7 15 CDS-5'UTR Intra-chr p13.2 Oncogene p22.1 Seq+ 100191 ChimerSeq TCGA FAWG TCGA_RNA-Seq GIGYF2-C6orf52 GIGYF2 chr2 232796221 + C6orf52 chr6 10672636 - Exonic hg38 READ TCGA-AH-6544-01A 11 130 5'UTR-5'UTR Inter-chr q37.1 p24.2 Seq+ 100192 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFAT5-CRYM NFAT5 chr16 69566374 + CRYM chr16 21269891 - Exonic hg38 READ TCGA-AH-6549-01A 8 43 5'UTR-5'UTR Intra-chr q22.1 Transcription factor Seq+ 100193 ChimerSeq TCGA FAWG TCGA_RNA-Seq KPNA6-RAB11FIP4 KPNA6 chr1 32108134 + RAB11FIP4 chr17 31517651 + Exonic hg38 READ TCGA-AH-6549-01A 4 15 Out-of-frame Inter-chr p35.2 q11.2 Seq+ 100194 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL20-TPTE KLHL20 chr1 173715654 + TPTE chr21 10602058 + Exonic hg38 READ TCGA-AH-6549-01A 4 2 5'UTR-CDS Inter-chr q25.1 p11.2 100195 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13A-KIF13A VPS13A chr9 77177804 + KIF13A chr6 17987144 - Exonic hg38 READ TCGA-AH-6549-01A 1 7 In-Frame Inter-chr q21.2 p22.3 Seq+ 100196 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIP2A-YBEY DIP2A chr21 46534687 + YBEY chr21 46286870 + Exonic hg38 READ TCGA-AH-6549-01A 1 5 CDS-5'UTR Intra-chr q22.3 q22.3 Seq+ 100197 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNPY3-RPL7L1 CNPY3 chr6 42934598 + RPL7L1 chr6 42883451 + Exonic hg38 READ TCGA-AH-6549-01A 1 2 Out-of-frame Intra-chr p21.1 p21.1 100198 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPARC-HSP90B1 SPARC chr5 151674612 - HSP90B1 chr12 103947374 + Exonic hg38 READ TCGA-AH-6549-01A 1 1 In-Frame Inter-chr q33.1 Tumor suppressor gene q23.3 Tumor suppressor gene 100199 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCE1-RARA SMARCE1 chr17 40635931 - RARA chr17 40355263 + Exonic hg38 READ TCGA-AH-6643-01A 168 733 In-Frame Intra-chr q21.2 q21.2 Oncogene Transcription factor Seq+ 100200 ChimerSeq TCGA FAWG TCGA_RNA-Seq FANCI-CRAT37 FANCI chr15 89295094 + CRAT37 chr15 91473221 + Exonic hg38 READ TCGA-AH-6643-01A 1 6 CDS-5'UTR Intra-chr q26.1 q26.1 100201 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS9-CASC16 INTS9 chr8 28812327 - CASC16 chr16 52591067 - Exonic hg38 READ TCGA-AH-6644-01A 3 33 3'UTR-3'UTR Inter-chr p21.1 q12.2 Seq+ 100202 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC9A1-PEX10 SLC9A1 chr1 27153983 - PEX10 chr1 2410451 - Exonic hg38 READ TCGA-AH-6644-01A 2 2 In-Frame Intra-chr p36.11 p36.32 100203 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP4-CFL1 LRP4 chr11 46918328 - CFL1 chr11 65856242 - Exonic hg38 READ TCGA-AH-6903-01A 1 2 Out-of-frame Intra-chr p11.2 q13.1 100204 ChimerSeq TCGA FAWG TCGA_RNA-Seq GMDS-TMTC2 GMDS chr6 2245321 - TMTC2 chr12 82930431 + Exonic hg38 READ TCGA-BM-6198-01A 8 20 Out-of-frame Inter-chr p25.3 q21.31 Seq+ 100205 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUL4A-TFDP1 CUL4A chr13 113210088 + TFDP1 chr13 113610996 + Exonic hg38 READ TCGA-CI-6619-01B 1 5 In-Frame Intra-chr q34 q34 Transcription factor Seq+ 100206 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGF2BP1-BAIAP2 IGF2BP1 chr17 49031973 + BAIAP2 chr17 81099928 + Exonic hg38 READ TCGA-CI-6619-01B 1 4 Out-of-frame Intra-chr q21.32 q25.3 Seq+ 100207 ChimerSeq TCGA FAWG TCGA_RNA-Seq VKORC1L1-ACHE VKORC1L1 chr7 65873565 + ACHE chr7 100891338 - Exonic hg38 READ TCGA-CI-6621-01A 33 46 In-Frame Intra-chr q11.21 q22.1 Tumor suppressor gene Seq+ 100208 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTX2P1-SRRT DTX2P1 chr7 76978876 + SRRT chr7 100886247 + Exonic hg38 READ TCGA-CI-6621-01A 3 20 Out-of-frame Intra-chr q11.23 q22.1 Seq+ 100209 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPRED1-AP3B2 SPRED1 chr15 38299547 + AP3B2 chr15 82689453 - Exonic hg38 READ TCGA-CI-6621-01A 2 5 Out-of-frame Intra-chr q14 q25.2 Seq+ 100210 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTX2-SRRT DTX2 chr7 76480777 + SRRT chr7 100886247 + Exonic hg38 READ TCGA-CI-6621-01A 1000 1000 3'UTR-CDS Intra-chr q22.1 Seq+ 100211 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPEP1-TCF25 DPEP1 chr16 89630514 + TCF25 chr16 89910591 + Exonic hg38 READ TCGA-CI-6622-01A 4 10 In-Frame Intra-chr q24.3 q24.3 Seq+ 100212 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM193B-SGCD FAM193B chr5 177531282 - SGCD chr5 156508601 + Exonic hg38 READ TCGA-CI-6622-01A 1 5 In-Frame Intra-chr q35.3 q33.2 Seq+ 100213 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICALL2-UCKL1 MICALL2 chr7 1446713 - UCKL1 chr20 63941208 - Exonic hg38 READ TCGA-CI-6622-01A 1 1 In-Frame Inter-chr p22.3 q13.33 Seq+ 100214 ChimerSeq TCGA FAWG TCGA_RNA-Seq STN1-TM9SF3 STN1 chr10 103917462 - TM9SF3 chr10 96576829 - Exonic hg38 READ TCGA-CI-6624-01C 2 5 Out-of-frame Intra-chr q24.33 q24.1 100215 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP54-DNAJB12 USP54 chr10 73571421 - DNAJB12 chr10 72345127 - Exonic hg38 READ TCGA-CI-6624-01C 1 6 Out-of-frame Intra-chr q22.2 q22.1 Seq+ 100216 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX30-FBXW12 DHX30 chr3 47810711 + FBXW12 chr3 48378317 + Exonic hg38 READ TCGA-CL-4957-01A 3 18 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 100217 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLK-SKIV2L2 POLK chr5 75587058 + SKIV2L2 chr5 55340010 + Exonic hg38 READ TCGA-CL-5918-01A 1 6 Out-of-frame Intra-chr q13.3 q11.2 Seq+ 100218 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC3-CBS TTC3 chr21 37073473 + CBS chr21 43073341 - Exonic hg38 READ TCGA-DC-4745-01A 4 8 5'UTR-5'UTR Intra-chr q22.13 q22.3 Seq+ 100219 ChimerSeq TCGA FAWG TCGA_RNA-Seq APP-TSPEAR APP chr21 25954590 - TSPEAR chr21 44568005 - Exonic hg38 READ TCGA-DC-4745-01A 4 5 In-Frame Intra-chr q21.3 q22.3 Seq+ 100220 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSPN-PKP2 SSPN chr12 26122152 + PKP2 chr12 32796298 - Exonic hg38 READ TCGA-DC-4745-01A 1 8 5'UTR-CDS Intra-chr p12.1 p11.21 Seq+ 100221 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCB1-PSMF1 PLCB1 chr20 8150371 + PSMF1 chr20 1125498 + Exonic hg38 READ TCGA-DC-4749-01A 1 3 In-Frame Intra-chr p12.3 p13 100222 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMX4-PKIG TMX4 chr20 8010200 - PKIG chr20 44614534 + Exonic hg38 READ TCGA-DC-4749-01A 1 3 CDS-5'UTR Intra-chr p12.3 q13.12 100223 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF4G3-CFAP74 EIF4G3 chr1 21050866 - CFAP74 chr1 1947054 - Exonic hg38 READ TCGA-DC-5337-01A 6 16 5'UTR-CDS Intra-chr p36.12 p36.33 100224 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLA2G6-BAIAP2L2 PLA2G6 chr22 38169218 - BAIAP2L2 chr22 38087264 - Exonic hg38 READ TCGA-DC-5337-01A 1000 1000 In-Frame Intra-chr q13.1 q13.1 100225 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAN3-LATS2 PAN3 chr13 28139087 + LATS2 chr13 20983806 - Exonic hg38 READ TCGA-DC-6154-01A 11 17 Out-of-frame Intra-chr q12.2 q12.11 AGC:NDR Tumor suppressor gene Seq+ 100226 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAN3-KATNAL1 PAN3 chr13 28177935 + KATNAL1 chr13 30283791 - Exonic hg38 READ TCGA-DC-6154-01A 7 8 CDS-5'UTR Intra-chr q12.2 q12.3 Seq+ 100227 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2C-LMTK3 KMT2C chr7 152148033 - LMTK3 chr19 48494109 - Exonic hg38 READ TCGA-DC-6154-01A 3 10 In-Frame Inter-chr q36.1 Oncogene Tumor suppressor gene q13.33 Seq+ 100228 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNAS-LRCH1 GNAS chr20 58905480 + LRCH1 chr13 46681741 + Exonic hg38 READ TCGA-DC-6156-01A 2 6 Out-of-frame Inter-chr q13.32 Oncogene q14.13 Seq+ 100229 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAPB-CST9L NAPB chr20 23394922 - CST9L chr20 23566087 - Exonic hg38 READ TCGA-DC-6157-01A 3 16 In-Frame Intra-chr p11.21 p11.21 Seq+ 100230 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2CD3-VPS37C C2CD3 chr11 74042054 - VPS37C chr11 61138835 - Exonic hg38 READ TCGA-DC-6158-01A 4 21 CDS-5'UTR Intra-chr q13.4 q12.2 Seq+ 100231 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNQ1-MMP26 KCNQ1 chr11 2588854 + MMP26 chr11 4767270 + Exonic hg38 READ TCGA-DC-6160-01A 4 9 3'UTR-5'UTR Intra-chr p15.5 p15.4 Seq+ 100232 ChimerSeq TCGA FAWG TCGA_RNA-Seq PATJ-MAP2K5 PATJ chr1 61808530 + MAP2K5 chr15 67748231 + Exonic hg38 READ TCGA-DC-6683-01A 8 41 In-Frame Inter-chr p31.3 q23 STE:STE7 100233 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPCN2-AS2 TPCN2 chr11 69063967 + AS2 chr11 70647341 + Exonic hg38 READ TCGA-DT-5265-01A 2 18 Out-of-frame Intra-chr q13.3 100234 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-SYT7 SHANK2 chr11 71224697 - SYT7 chr11 61556207 - Exonic hg38 READ TCGA-DT-5265-01A 4 3 5'UTR-CDS Intra-chr q13.4 q12.2 Seq+ 100235 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLB-HOOK3 POLB chr8 42345019 + HOOK3 chr8 42906173 + Exonic hg38 READ TCGA-DY-A0XA-01A 1 5 In-Frame Intra-chr p11.21 p11.21 Oncogene 100236 ChimerSeq TCGA FAWG TCGA_RNA-Seq GMEB2-RALY GMEB2 chr20 63602965 - RALY chr20 34072066 + Exonic hg38 READ TCGA-DY-A1DD-01A 9 77 CDS-5'UTR Intra-chr q13.33 Transcription factor q11.22 Seq+ 100237 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD52-KDM5A RAD52 chr12 949602 - KDM5A chr12 356537 - Exonic hg38 READ TCGA-DY-A1DD-01A 4 9 5'UTR-CDS Intra-chr p13.33 p13.33 Tumor suppressor gene Seq+ 100238 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD2-RALY BTBD2 chr19 2013547 - RALY chr20 34072066 + Exonic hg38 READ TCGA-DY-A1DE-01A 2 13 CDS-5'UTR Inter-chr p13.3 q11.22 Seq+ 100239 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANGO6-PRMT7 TANGO6 chr16 69040421 + PRMT7 chr16 68345675 + Exonic hg38 READ TCGA-DY-A1DE-01A 1 11 In-Frame Intra-chr q22.1 q22.1 100240 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF714-STAP2 ZNF714 chr19 21084069 + STAP2 chr19 4338944 - Exonic hg38 READ TCGA-DY-A1DF-01A 15 53 5'UTR-5'UTR Intra-chr p12 Transcription factor p13.3 Seq+ 100241 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRR12-SYMPK PRR12 chr19 49616219 + SYMPK chr19 45854507 - Exonic hg38 READ TCGA-DY-A1DF-01A 7 24 CDS-5'UTR Intra-chr q13.33 Transcription factor q13.32 Seq+ 100242 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASSF3-TBK1 RASSF3 chr12 64610743 + TBK1 chr12 64495483 + Exonic hg38 READ TCGA-EF-5830-01A 8 39 In-Frame Intra-chr q14.2 Tumor suppressor gene q14.2 Other:IKK Seq+ 100243 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAL2-B2M MAL2 chr8 119208604 + B2M chr15 44715423 + Exonic hg38 READ TCGA-EF-5830-01A 3 8 CDS-3'UTR Inter-chr q24.12 Oncogene Seq+ 100244 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR1A-CTNNA2 POLR1A chr2 86038700 - CTNNA2 chr2 80604074 + Exonic hg38 READ TCGA-EF-5831-01A 25 123 In-Frame Intra-chr p11.2 p12 Tumor suppressor gene Seq+ 100245 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNA13-SLC39A11 GNA13 chr17 65053502 - SLC39A11 chr17 73031714 - Exonic hg38 READ TCGA-EF-5831-01A 2 16 In-Frame Intra-chr q24.1 q25.1 Seq+ 100246 ChimerSeq TCGA FAWG TCGA_RNA-Seq HECTD4-TMEM241 HECTD4 chr12 112319225 - TMEM241 chr18 23421444 - Exonic hg38 READ TCGA-EF-5831-01A 1 13 In-Frame Inter-chr q24.13 q11.2 100247 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM241-RIOK3 TMEM241 chr18 23421367 - RIOK3 chr18 23486108 + Exonic hg38 READ TCGA-EF-5831-01A 1 13 3'UTR-3'UTR Intra-chr q11.2 q11.2 Atypical:RIO Seq+ 100248 ChimerSeq TCGA FAWG TCGA_RNA-Seq YEATS4-CPSF6 YEATS4 chr12 69370975 + CPSF6 chr12 69269512 + Exonic hg38 READ TCGA-EI-6506-01A 10 39 CDS-3'UTR Intra-chr q15 q15 Seq+ 100249 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR55-ANKHD1 WDR55 chr5 140672946 + ANKHD1 chr5 140504819 + Exonic hg38 READ TCGA-EI-6506-01A 3 5 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 100250 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUAK2-DSTYK NUAK2 chr1 205321398 - DSTYK chr1 205169832 - Exonic hg38 READ TCGA-EI-6506-01A 1 8 In-Frame Intra-chr q32.1 q32.1 100251 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFYVE9-BTF3L4 ZFYVE9 chr1 52142403 + BTF3L4 chr1 52064825 + Exonic hg38 READ TCGA-EI-6506-01A 1 2 5'UTR-5'UTR Intra-chr p32.3 p32.3 Seq+ 100252 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNMT-SPOPL HNMT chr2 137970217 + SPOPL chr2 138559022 + Exonic hg38 READ TCGA-EI-6508-01A 2 3 Out-of-frame Intra-chr q22.1 q22.1 100253 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOCS7-MIEN1 SOCS7 chr17 38368050 + MIEN1 chr17 39730291 - Exonic hg38 READ TCGA-EI-6509-01A 278 1295 3'UTR-CDS Intra-chr q12 q12 Seq+ 100254 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRCIN1-LASP1 SRCIN1 chr17 38605633 - LASP1 chr17 38914325 + Exonic hg38 READ TCGA-EI-6509-01A 17 380 5'UTR-5'UTR Intra-chr q12 q12 Seq+ 100255 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL45-ARHGAP23 MRPL45 chr17 38299468 + ARHGAP23 chr17 38458102 + Exonic hg38 READ TCGA-EI-6509-01A 46 177 3'UTR-3'UTR Intra-chr q12 q12 Seq+ 100256 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIA-ZNF253 NFIA chr1 61088680 + ZNF253 chr19 19891474 + Exonic hg38 READ TCGA-EI-6509-01A 1 8 In-Frame Inter-chr p31.3 Transcription factor p13.11 Transcription factor Seq+ 100257 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOA-EMC3 RHOA chr3 49368428 - EMC3 chr3 9969801 - Exonic hg38 READ TCGA-EI-6510-01A 211 639 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene p25.3 Seq+ 100258 ChimerSeq TCGA FAWG TCGA_RNA-Seq EMC3-RHOA EMC3 chr3 9970582 - RHOA chr3 49362626 - Exonic hg38 READ TCGA-EI-6510-01A 157 403 In-Frame Intra-chr p25.3 p21.31 Oncogene Tumor suppressor gene Seq+ 100259 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD2AP-SLC25A13 CD2AP chr6 47533755 + SLC25A13 chr7 96171524 - Exonic hg38 READ TCGA-EI-6510-01A 37 95 In-Frame Inter-chr p12.3 q21.3 Seq+ 100260 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A13-CD2AP SLC25A13 chr7 96184277 - CD2AP chr6 47544606 + Exonic hg38 READ TCGA-EI-6510-01A 2 17 In-Frame Inter-chr q21.3 p12.3 Seq+ 100261 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP7D2-SH3KBP1 MAP7D2 chrX 20116750 - SH3KBP1 chrX 19706984 - Exonic hg38 READ TCGA-EI-6511-01A 3 17 In-Frame Intra-chr p22.12 p22.12 Seq+ 100262 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGAPA2-BTBD3 RALGAPA2 chr20 20676236 - BTBD3 chr20 11918334 + Exonic hg38 READ TCGA-EI-6514-01A 1 12 Out-of-frame Intra-chr p11.23 p12.2 Seq+ 100263 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOV10-SYCP1 MOV10 chr1 112690098 + SYCP1 chr1 114895448 + Exonic hg38 READ TCGA-EI-6883-01A 1 5 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 100264 ChimerSeq TCGA FAWG TCGA_RNA-Seq LATS1-NUP43 LATS1 chr6 149717849 - NUP43 chr6 149731735 - Exonic hg38 READ TCGA-EI-6884-01A 7 20 5'UTR-CDS Intra-chr q25.1 AGC:NDR Tumor suppressor gene q25.1 Seq+ 100265 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCAR2-PDLIM2 CCAR2 chr8 22608065 + PDLIM2 chr8 22584821 + Exonic hg38 READ TCGA-EI-6884-01A 3 11 In-Frame Intra-chr p21.3 Tumor suppressor gene p21.3 Seq+ 100266 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLIM4-PRDX1 GOLIM4 chr3 168041392 - PRDX1 chr1 45511414 - Exonic hg38 READ TCGA-EI-6885-01A 96 437 Out-of-frame Inter-chr q26.2 p34.1 Seq+ 100267 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNKS-MSRA TNKS chr8 9615677 + MSRA chr8 10207833 + Exonic hg38 READ TCGA-EI-6885-01A 21 103 5'UTR-5'UTR Intra-chr p23.1 p23.1 Seq+ 100268 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRK-IL20RA PTPRK chr6 128520259 - IL20RA chr6 137017103 - Exonic hg38 READ TCGA-EI-7002-01A 18 82 5'UTR-5'UTR Intra-chr Tumor suppressor gene q23.3 Seq+ 100269 ChimerSeq TCGA FAWG TCGA_RNA-Seq LHFPL2-PTPRK LHFPL2 chr5 78509784 - PTPRK chr6 128089992 - Exonic hg38 READ TCGA-EI-7002-01A 8 62 CDS-5'UTR Inter-chr q14.1 Tumor suppressor gene Seq+ 100270 ChimerSeq TCGA FAWG TCGA_RNA-Seq OPA3-TNPO1 OPA3 chr19 45584623 - TNPO1 chr5 72848385 + Exonic hg38 READ TCGA-EI-7002-01A 2 6 Out-of-frame Inter-chr q13.32 q13.2 Seq+ 100271 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYH9-SORCS1 MYH9 chr22 36305033 - SORCS1 chr10 106730114 - Exonic hg38 READ TCGA-EI-7004-01A 6 16 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene q25.1 Seq+ 100272 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM24-BRAF TRIM24 chr7 138571003 + BRAF chr7 140850212 - Exonic hg38 READ TCGA-F5-6464-01A 2 8 In-Frame Intra-chr q33 Oncogene Tumor suppressor gene q34 TKL:RAF Oncogene Pub Seq+ 100273 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM122B-UCKL1 FAM122B chrX 134797121 - UCKL1 chr20 63941208 - Exonic hg38 READ TCGA-F5-6465-01A 2 4 5'UTR-CDS Inter-chr q26.3 q13.33 100274 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRCH4-ACOT12 LRCH4 chr7 100581777 - ACOT12 chr5 81360038 - Exonic hg38 READ TCGA-F5-6465-01A 1 5 Out-of-frame Inter-chr q22.1 q14.1 Seq+ 100275 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBCK1-ANO9 RBCK1 chr20 419731 + ANO9 chr11 428826 - Exonic hg38 READ TCGA-F5-6465-01A 1 3 In-Frame Inter-chr p13 Transcription factor p15.5 100276 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK8-AS2 CDK8 chr13 26254769 + AS2 chr13 27182834 + Exonic hg38 READ TCGA-F5-6571-01A 6 32 Out-of-frame Intra-chr q12.13 CMGC:CDK Oncogene 100277 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPATA13-TPTE2P1 SPATA13 chr13 24251862 + TPTE2P1 chr13 24951488 - Exonic hg38 READ TCGA-F5-6571-01A 4 13 CDS-3'UTR Intra-chr q12.12 q12.13 Seq+ 100278 ChimerSeq TCGA FAWG TCGA_RNA-Seq C21orf58-IFNGR2 C21orf58 chr21 46311456 - IFNGR2 chr21 33432177 + Exonic hg38 READ TCGA-F5-6810-01A 5 26 CDS-3'UTR Intra-chr q22.3 Seq+ 100279 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCEANC2-MICU1 TCEANC2 chr1 54068897 + MICU1 chr10 72477256 - Exonic hg38 READ TCGA-F5-6810-01A 3 27 In-Frame Inter-chr p32.3 q22.1 Seq+ 100280 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH3-SPECC1 NOTCH3 chr19 15186878 - SPECC1 chr17 20204333 + Exonic hg38 READ TCGA-F5-6810-01A 4 13 In-Frame Inter-chr p13.12 Oncogene Tumor suppressor gene p11.2 Seq+ 100281 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNKL-STX1B UNKL chr16 1390632 - STX1B chr16 31001603 - Exonic hg38 READ TCGA-F5-6811-01A 2 7 In-Frame Intra-chr p13.3 p11.2 Seq+ 100282 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAU2-PLEKHF2 STAU2 chr8 73673107 - PLEKHF2 chr8 95154031 + Exonic hg38 READ TCGA-F5-6813-01A 5 11 CDS-5'UTR Intra-chr q21.11 q22.1 Seq+ 100283 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF1-RPS19 ARHGEF1 chr19 41893303 + RPS19 chr19 41869031 + Exonic hg38 READ TCGA-F5-6814-01A 12 81 In-Frame Intra-chr q13.2 q13.2 Seq+ 100284 ChimerSeq TCGA FAWG TCGA_RNA-Seq KPNA6-TMEM39B KPNA6 chr1 32108134 + TMEM39B chr1 32100442 + Exonic hg38 READ TCGA-F5-6814-01A 11 38 Out-of-frame Intra-chr p35.2 p35.2 Seq+ 100285 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF130-MGAT4B RNF130 chr5 180040453 - MGAT4B chr5 179799636 - Exonic hg38 READ TCGA-F5-6814-01A 9 26 CDS-5'UTR Intra-chr q35.3 Seq+ 100286 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPEP1-TCF25 DPEP1 chr16 89613719 + TCF25 chr16 89910591 + Exonic hg38 READ TCGA-F5-6861-01A 1 4 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 100287 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICALL2-UCKL1 MICALL2 chr7 1446713 - UCKL1 chr20 63941208 - Exonic hg38 READ TCGA-F5-6861-01A 1 3 In-Frame Inter-chr p22.3 q13.33 Seq+ 100288 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUDT4-MRPL42 NUDT4 chr12 93398855 + MRPL42 chr12 93501176 + Exonic hg38 READ TCGA-F5-6863-01A 1 2 Out-of-frame Intra-chr q22 q22 100289 ChimerSeq TCGA FAWG TCGA_RNA-Seq SV2C-NMU SV2C chr5 76209887 + NMU chr4 55609179 - Exonic hg38 READ TCGA-F5-6863-01A 1 2 Out-of-frame Inter-chr q13.3 q12 100290 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHMP4B-FER1L4 CHMP4B chr20 33811658 + FER1L4 chr20 35579114 - Exonic hg38 READ TCGA-F5-6864-01A 13 52 CDS-3'UTR Intra-chr q11.22 q11.22 Tumor suppressor gene Seq+ 100291 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMK2D-TLL2 CAMK2D chr4 113500463 - TLL2 chr10 96432962 - Exonic hg38 READ TCGA-F5-6864-01A 3 22 In-Frame Inter-chr q26 q24.1 Seq+ 100292 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP4R3B-ALK PPP4R3B chr2 55577315 - ALK chr2 29717697 - Exonic hg38 READ TCGA-F5-6864-01A 4 6 In-Frame Intra-chr p16.1 p23.1 TK:ALK Oncogene 100293 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R5E-STRN3 PPP2R5E chr14 63539529 - STRN3 chr14 30956242 - Exonic hg38 READ TCGA-F5-6864-01A 1 6 Out-of-frame Intra-chr q23.2 q12 100294 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD17-RPL9P9 ANKRD17 chr4 73258277 - RPL9P9 chr15 82372631 - Exonic hg38 READ TCGA-G5-6233-01A 10 28 Out-of-frame Inter-chr q13.3 q25.2 100295 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOL11-CMBL NOL11 chr17 67718088 + CMBL chr5 10282288 - Exonic hg38 READ TCGA-G5-6233-01A 1 4 Out-of-frame Inter-chr q24.2 p15.2 100296 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPC5-CMBL GPC5 chr13 92144989 + CMBL chr5 10282288 - Exonic hg38 READ TCGA-G5-6233-01A 1 3 In-Frame Inter-chr q31.3 Tumor suppressor gene p15.2 100297 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFTPH-ELF1 AFTPH chr2 64569679 + ELF1 chr13 40982282 - Exonic hg38 READ TCGA-G5-6235-01A 2 6 CDS-5'UTR Inter-chr p14 q14.11 Transcription factor Seq+ 100298 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPEP1-TCF25 DPEP1 chr16 89613719 + TCF25 chr16 89910591 + Exonic hg38 READ TCGA-G5-6572-01A 1 20 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 100299 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA5-CLCN7 LAMA5 chr20 62325316 - CLCN7 chr16 1459187 - Exonic hg38 READ TCGA-G5-6572-01A 2 3 In-Frame Inter-chr q13.33 p13.3 Seq+ 100300 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCB4-RASA3 PLCB4 chr20 9444243 + RASA3 chr13 113996739 - Exonic hg38 READ TCGA-G5-6641-01A 3 6 CDS-5'UTR Inter-chr p12.3 Seq+ 100301 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM94-LRRC52 TMEM94 chr17 75471929 + LRRC52 chr1 165563505 + Exonic hg38 SARC TCGA-3B-A9HI-01A 8 17 Out-of-frame Inter-chr q25.1 q24.1 100302 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARVA-USP47 PARVA chr11 12377783 + USP47 chr11 11952741 + Exonic hg38 SARC TCGA-3B-A9HI-01A 1 2 In-Frame Intra-chr p15.3 p15.3 Seq+ 100303 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM38-LSM7 RBM38 chr20 57393333 + LSM7 chr19 2324196 - Exonic hg38 SARC TCGA-3B-A9HJ-01A 17 67 Out-of-frame Inter-chr q13.31 Tumor suppressor gene p13.3 Seq+ 100304 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-CDK4 FRS2 chr12 69537983 + CDK4 chr12 57751736 - Exonic hg38 SARC TCGA-3B-A9HJ-01A 3 23 5'UTR-5'UTR Intra-chr q15 q14.1 CMGC:CDK Oncogene 100305 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-ADGRE1 FRS2 chr12 69470530 + ADGRE1 chr19 6928145 + Exonic hg38 SARC TCGA-3B-A9HJ-01A 2 22 5'UTR-CDS Inter-chr q15 p13.3 100306 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-FBRSL1 FRS2 chr12 69470530 + FBRSL1 chr12 132548003 + Exonic hg38 SARC TCGA-3B-A9HJ-01A 2 6 5'UTR-CDS Intra-chr q15 q24.33 Seq+ 100307 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCBLD1-CCT2 DCBLD1 chr6 117503979 + CCT2 chr12 69592059 + Exonic hg38 SARC TCGA-3B-A9HL-01A 250 927 In-Frame Inter-chr q22.1 q15 Seq+ 100308 ChimerSeq TCGA FAWG TCGA_RNA-Seq TDG-CDK17 TDG chr12 103966060 + CDK17 chr12 96289287 - Exonic hg38 SARC TCGA-3B-A9HL-01A 43 157 Out-of-frame Intra-chr q23.3 q23.1 Seq+ 100309 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCN8A-ANO2 SCN8A chr12 51663093 + ANO2 chr12 5647801 - Exonic hg38 SARC TCGA-3B-A9HL-01A 21 58 In-Frame Intra-chr q13.13 p13.31 Seq+ 100310 ChimerSeq TCGA FAWG TCGA_RNA-Seq FYN-CDK19 FYN chr6 111872968 - CDK19 chr6 110632161 - Exonic hg38 SARC TCGA-3B-A9HL-01A 15 72 5'UTR-CDS Intra-chr q21 TK:Src q21 Seq+ 100311 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLEC2B-MYRFL CLEC2B chr12 9869205 - MYRFL chr12 69952113 + Exonic hg38 SARC TCGA-3B-A9HL-01A 17 53 5'UTR-CDS Intra-chr p13.31 q15 Transcription factor 100312 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST3GAL4-ZW10 ST3GAL4 chr11 126355842 + ZW10 chr11 113748420 - Exonic hg38 SARC TCGA-3B-A9HL-01A 13 33 5'UTR-CDS Intra-chr q24.2 q23.2 Seq+ 100313 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA2-GRIP1 PPFIA2 chr12 81676791 - GRIP1 chr12 66432628 - Exonic hg38 SARC TCGA-3B-A9HL-01A 9 35 Out-of-frame Intra-chr q21.31 q14.3 Seq+ 100314 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGA2-NELL2 HMGA2 chr12 65838569 + NELL2 chr12 44703854 - Exonic hg38 SARC TCGA-3B-A9HL-01A 7 26 Out-of-frame Intra-chr q14.3 Transcription factor q12 Seq+ 100315 ChimerSeq TCGA FAWG TCGA_RNA-Seq NELL2-MUC21 NELL2 chr12 44665484 - MUC21 chr6 30986237 + Exonic hg38 SARC TCGA-3B-A9HL-01A 6 19 CDS-3'UTR Inter-chr q12 Seq+ 100316 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2A2-COL2A1 ATP2A2 chr12 110334143 + COL2A1 chr12 47984599 - Exonic hg38 SARC TCGA-3B-A9HL-01A 6 10 In-Frame Intra-chr q24.11 q13.11 Seq+ 100317 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFA12-NUP107 NDUFA12 chr12 95002739 - NUP107 chr12 68688962 + Exonic hg38 SARC TCGA-3B-A9HL-01A 3 22 Out-of-frame Intra-chr q22 q15 Seq+ 100318 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL8-CTDSP2 OSBPL8 chr12 76559397 - CTDSP2 chr12 57829596 - Exonic hg38 SARC TCGA-3B-A9HL-01A 2 22 5'UTR-CDS Intra-chr q21.2 q14.1 100319 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF21A-COPS7B KIF21A chr12 39319906 - COPS7B chr2 231791733 + Exonic hg38 SARC TCGA-3B-A9HL-01A 1 22 Out-of-frame Inter-chr q12 q37.1 Seq+ 100320 ChimerSeq TCGA FAWG TCGA_RNA-Seq EYA4-MAP3K5 EYA4 chr6 133241749 + MAP3K5 chr6 136705133 - Exonic hg38 SARC TCGA-3B-A9HL-01A 4 5 5'UTR-CDS Intra-chr q23.2 Tumor suppressor gene q23.3 STE:STE11 Seq+ 100321 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGF1R-MAP7 IGF1R chr15 98708107 + MAP7 chr6 136421799 - Exonic hg38 SARC TCGA-3B-A9HL-01A 3 6 In-Frame Inter-chr q26.3 TK:InsR Oncogene q23.3 Seq+ 100322 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRIP1-TSPAN31 GRIP1 chr12 66394208 - TSPAN31 chr12 57745745 + Exonic hg38 SARC TCGA-3B-A9HL-01A 1 13 Out-of-frame Intra-chr q14.3 q14.1 100323 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEDD1-PPFIA2 NEDD1 chr12 96912817 + PPFIA2 chr12 81754223 - Exonic hg38 SARC TCGA-3B-A9HL-01A 2 9 CDS-5'UTR Intra-chr q23.1 q21.31 Seq+ 100324 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFA12-ARMC2 NDUFA12 chr12 94994170 - ARMC2 chr6 108928088 + Exonic hg38 SARC TCGA-3B-A9HL-01A 1 7 Out-of-frame Inter-chr q22 q21 100325 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLLT1-CRLF1 MLLT1 chr19 6230570 - CRLF1 chr19 18599846 - Exonic hg38 SARC TCGA-3B-A9HL-01A 1 5 Out-of-frame Intra-chr p13.3 p13.11 Seq+ 100326 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE7B-KIF21A PDE7B chr6 136151255 + KIF21A chr12 39332744 - Exonic hg38 SARC TCGA-3B-A9HL-01A 1 5 Out-of-frame Inter-chr q23.3 q12 Seq+ 100327 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3B-MYSM1 RAB3B chr1 51933318 - MYSM1 chr1 58665631 - Exonic hg38 SARC TCGA-3B-A9HL-01A 1 5 Out-of-frame Intra-chr p32.3 p32.1 Transcription factor Seq+ 100328 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIGAR-ZNF827 TIGAR chr12 4321303 + ZNF827 chr4 145823525 - Exonic hg38 SARC TCGA-3B-A9HL-01A 1 4 In-Frame Inter-chr p13.32 q31.22 Transcription factor 100329 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMSAP1-STAU2 CAMSAP1 chr9 135907000 - STAU2 chr8 73617451 - Exonic hg38 SARC TCGA-3B-A9HL-01A 1 3 Out-of-frame Inter-chr q34.3 q21.11 Seq+ 100330 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAV3-E2F7 NAV3 chr12 78197401 + E2F7 chr12 77028138 - Exonic hg38 SARC TCGA-3B-A9HL-01A 1 2 Out-of-frame Intra-chr q21.2 q21.2 Transcription factor 100331 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL6A1-RBM19 COL6A1 chr21 45994229 + RBM19 chr12 113823321 - Exonic hg38 SARC TCGA-3B-A9HO-01A 840 1732 Out-of-frame Inter-chr q22.3 q24.21 100332 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARCH6-NDUFA6 2019_ 3_ 6_ chr5 10353917 + NDUFA6 chr22 42087175 - Exonic hg38 SARC TCGA-3B-A9HO-01A 211 803 Out-of-frame Inter-chr p15.2 Seq+ 100333 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-AVIL FRS2 chr12 69537983 + AVIL chr12 57799920 - Exonic hg38 SARC TCGA-3B-A9HO-01A 41 970 5'UTR-CDS Intra-chr q15 q14.1 Seq+ 100334 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMC4-FRS2 PSMC4 chr19 39980717 + FRS2 chr12 69486202 + Exonic hg38 SARC TCGA-3B-A9HO-01A 103 285 3'UTR-5'UTR Inter-chr q15 Seq+ 100335 ChimerSeq TCGA FAWG TCGA_RNA-Seq ULK1-BCRP3 ULK1 chr12 131895824 + BCRP3 chr22 24653006 + Exonic hg38 SARC TCGA-3B-A9HO-01A 119 114 CDS-5'UTR Inter-chr q24.33 Other:ULK q11.23 100336 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPKAPK5-CCDC38 MAPKAPK5 chr12 111842769 + CCDC38 chr12 95872460 - Exonic hg38 SARC TCGA-3B-A9HO-01A 31 115 In-Frame Intra-chr q24.12 CAMK:MAPKAPK q23.1 Seq+ 100337 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC41A2-LIN7A SLC41A2 chr12 104958088 - LIN7A chr12 80848322 - Exonic hg38 SARC TCGA-3B-A9HO-01A 15 108 5'UTR-5'UTR Intra-chr q23.3 q21.31 Seq+ 100338 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMTC3-RILPL1 TMTC3 chr12 88160851 + RILPL1 chr12 123485805 - Exonic hg38 SARC TCGA-3B-A9HO-01A 23 58 Out-of-frame Intra-chr q21.32 q24.31 Seq+ 100339 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAH10-LIN7A DNAH10 chr12 123838689 + LIN7A chr12 80845939 - Exonic hg38 SARC TCGA-3B-A9HO-01A 16 56 3'UTR-3'UTR Intra-chr q21.31 Seq+ 100340 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPATC1L-IGF1 SPATC1L chr21 46184356 - IGF1 chr12 102419690 - Exonic hg38 SARC TCGA-3B-A9HO-01A 12 43 5'UTR-CDS Inter-chr q23.2 Tumor suppressor gene 100341 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC28-EWSR1 TTC28 chr22 28629552 - EWSR1 chr22 29298733 + Exonic hg38 SARC TCGA-3B-A9HO-01A 8 33 Out-of-frame Intra-chr q12.1 q12.2 Seq+ 100342 ChimerSeq TCGA FAWG TCGA_RNA-Seq GUCD1-SGSM1 GUCD1 chr22 24555615 - SGSM1 chr22 24806441 + Exonic hg38 SARC TCGA-3B-A9HO-01A 11 17 In-Frame Intra-chr q11.23 q11.23 100343 ChimerSeq TCGA FAWG TCGA_RNA-Seq CIT-LYZ CIT chr12 119822820 - LYZ chr12 69350108 + Exonic hg38 SARC TCGA-3B-A9HO-01A 6 30 In-Frame Intra-chr q24.23 q15 Seq+ 100344 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK4-PICSAR CDK4 chr12 57752175 - PICSAR chr21 44999656 - Exonic hg38 SARC TCGA-3B-A9HO-01A 5 27 5'UTR-3'UTR Inter-chr q14.1 CMGC:CDK Oncogene q22.3 100345 ChimerSeq TCGA FAWG TCGA_RNA-Seq ULK1-TCTN1 ULK1 chr12 131915421 + TCTN1 chr12 110628767 + Exonic hg38 SARC TCGA-3B-A9HO-01A 8 15 In-Frame Intra-chr q24.33 Other:ULK q24.11 Seq+ 100346 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAIM2-C12orf40 FAIM2 chr12 49887386 - C12orf40 chr12 39716756 + Exonic hg38 SARC TCGA-3B-A9HO-01A 7 17 Out-of-frame Intra-chr q13.12 q12 100347 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2B1-C8orf34 ATP2B1 chr12 89709219 - C8orf34 chr8 68708994 + Exonic hg38 SARC TCGA-3B-A9HO-01A 4 26 5'UTR-5'UTR Inter-chr q21.33 q13.2 Seq+ 100348 ChimerSeq TCGA FAWG TCGA_RNA-Seq C12orf40-MTERF3 C12orf40 chr12 39754332 + MTERF3 chr8 96258700 - Exonic hg38 SARC TCGA-3B-A9HO-01A 7 9 5'UTR-5'UTR Inter-chr q12 q22.1 Transcription factor 100349 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTERF3-HSD17B6 MTERF3 chr8 96250906 - HSD17B6 chr12 56773834 + Exonic hg38 SARC TCGA-3B-A9HO-01A 7 9 CDS-5'UTR Inter-chr q22.1 Transcription factor q13.3 100350 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPQ-KSR2 CPQ chr8 96645402 + KSR2 chr12 117860431 - Exonic hg38 SARC TCGA-3B-A9HO-01A 7 8 5'UTR-CDS Inter-chr q22.1 q24.23 TKL:RAF 100351 ChimerSeq TCGA FAWG TCGA_RNA-Seq KSR2-CEP290 KSR2 chr12 117761011 - CEP290 chr12 88050433 - Exonic hg38 SARC TCGA-3B-A9HO-01A 7 8 Out-of-frame Intra-chr q24.23 TKL:RAF q21.32 Seq+ 100352 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXW8-ATP23 FBXW8 chr12 116928127 + ATP23 chr12 57951758 + Exonic hg38 SARC TCGA-3B-A9HO-01A 5 15 CDS-5'UTR Intra-chr q24.22 100353 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAR-SUMO3 ADAR chr1 154627855 - SUMO3 chr21 44809118 - Exonic hg38 SARC TCGA-3B-A9HO-01A 6 9 5'UTR-CDS Inter-chr q21.3 q22.3 100354 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDR2-CHD1L DDR2 chr1 162655374 + CHD1L chr1 147252623 + Exonic hg38 SARC TCGA-3B-A9HO-01A 3 11 5'UTR-5'UTR Intra-chr q23.3 TK:DDR Oncogene Tumor suppressor gene q21.1 Seq+ 100355 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM5-PTDSS1 TMEM5 chr12 63785072 + PTDSS1 chr8 96273299 + Exonic hg38 SARC TCGA-3B-A9HO-01A 3 11 Out-of-frame Inter-chr q14.2 q22.1 Seq+ 100356 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAP-MTERF3 DAP chr5 10761014 - MTERF3 chr8 96239685 - Exonic hg38 SARC TCGA-3B-A9HO-01A 2 13 Out-of-frame Inter-chr p15.2 q22.1 Transcription factor 100357 ChimerSeq TCGA FAWG TCGA_RNA-Seq RILPL1-CDK4 RILPL1 chr12 123484180 - CDK4 chr12 57748617 - Exonic hg38 SARC TCGA-3B-A9HO-01A 3 8 Out-of-frame Intra-chr q24.31 q14.1 CMGC:CDK Oncogene 100358 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELK3-MPTX1 ELK3 chr12 96223773 + MPTX1 chr1 159276507 + Exonic hg38 SARC TCGA-3B-A9HO-01A 3 3 Out-of-frame Inter-chr q23.1 Transcription factor q23.2 100359 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGSM1-GAL3ST1 SGSM1 chr22 24859840 + GAL3ST1 chr22 30557401 - Exonic hg38 SARC TCGA-3B-A9HO-01A 3 3 Out-of-frame Intra-chr q11.23 q12.2 Seq+ 100360 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR3B-SLC35E3 POLR3B chr12 106410960 + SLC35E3 chr12 68793288 + Exonic hg38 SARC TCGA-3B-A9HO-01A 1 10 CDS-3'UTR Intra-chr q23.3 q15 100361 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDC2-TMEM132D SDC2 chr8 96494331 + TMEM132D chr12 129084702 - Exonic hg38 SARC TCGA-3B-A9HO-01A 1 10 In-Frame Inter-chr q22.1 q24.33 100362 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA5A-DAP SEMA5A chr5 9054087 - DAP chr5 10683571 - Exonic hg38 SARC TCGA-3B-A9HO-01A 2 4 Out-of-frame Intra-chr p15.31 p15.2 100363 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF641-MYRFL ZNF641 chr12 48347252 - MYRFL chr12 69855280 + Exonic hg38 SARC TCGA-3B-A9HO-01A 1 8 Out-of-frame Intra-chr q13.11 Transcription factor q15 Transcription factor 100364 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPQ-CORO1C CPQ chr8 96645402 + CORO1C chr12 108701323 - Exonic hg38 SARC TCGA-3B-A9HO-01A 1 6 5'UTR-5'UTR Inter-chr q22.1 q24.11 100365 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSFM-C8orf34 TSFM chr12 57787162 + C8orf34 chr8 68815886 + Exonic hg38 SARC TCGA-3B-A9HO-01A 1 6 Out-of-frame Inter-chr q14.1 q13.2 100366 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPS5-HVCN1 COPS5 chr8 67045812 - HVCN1 chr12 110661448 - Exonic hg38 SARC TCGA-3B-A9HO-01A 1 5 Out-of-frame Inter-chr q13.1 q24.11 100367 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSTB-PDE9A CSTB chr21 43776204 - PDE9A chr21 42768188 + Exonic hg38 SARC TCGA-3B-A9HO-01A 1 5 In-Frame Intra-chr q22.3 q22.3 100368 ChimerSeq TCGA FAWG TCGA_RNA-Seq RILPL1-SDSL RILPL1 chr12 123484180 - SDSL chr12 113428420 + Exonic hg38 SARC TCGA-3B-A9HO-01A 1 5 Out-of-frame Intra-chr q24.31 q24.13 100369 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSFM-CPM TSFM chr12 57793073 + CPM chr12 68871956 - Exonic hg38 SARC TCGA-3B-A9HO-01A 2 1 Out-of-frame Intra-chr q14.1 q15 Seq+ 100370 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM4B-FADD RBM4B chr11 66676668 - FADD chr11 70206133 + Exonic hg38 SARC TCGA-3B-A9HR-01A 29 89 In-Frame Intra-chr q13.2 q13.3 Tumor suppressor gene Seq+ 100371 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNDC3A-LPAR6 FNDC3A chr13 49114731 + LPAR6 chr13 48389812 - Exonic hg38 SARC TCGA-3B-A9HR-01A 7 90 CDS-3'UTR Intra-chr q14.2 q14.2 Seq+ 100372 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53-FAM196B TP53 chr17 7687377 - FAM196B chr5 169884816 - Exonic hg38 SARC TCGA-3B-A9HR-01A 11 50 Out-of-frame Inter-chr p13.1 Oncogene Tumor suppressor gene Transcription factor q35.1 100373 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD1-ARHGAP26 NSD1 chr5 177212195 + ARHGAP26 chr5 142907704 + Exonic hg38 SARC TCGA-3B-A9HR-01A 4 63 In-Frame Intra-chr q35.3 Oncogene q31.3 Seq+ 100374 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYH11-MYLK MYH11 chr16 15715164 - MYLK chr3 123664258 - Exonic hg38 SARC TCGA-3B-A9HR-01A 1 36 5'UTR-CDS Inter-chr Oncogene q21.1 100375 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYLK-FLNA MYLK chr3 123620207 - FLNA chrX 154350207 - Exonic hg38 SARC TCGA-3B-A9HR-01A 1 25 In-Frame Inter-chr q21.1 q28 Tumor suppressor gene 100376 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRUNE2-MYH11 PRUNE2 chr9 76905928 - MYH11 chr16 15704123 - Exonic hg38 SARC TCGA-3B-A9HR-01A 1 4 CDS-5'UTR Inter-chr q21.2 Oncogene 100377 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP1-DAZAP2 LRP1 chr12 57175926 + DAZAP2 chr12 51242467 + Exonic hg38 SARC TCGA-3B-A9HS-01A 12 2740 Out-of-frame Intra-chr q13.3 q13.13 100378 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSP2-TSPAN8 CTDSP2 chr12 57846372 - TSPAN8 chr12 71157787 - Exonic hg38 SARC TCGA-3B-A9HS-01A 213 552 CDS-5'UTR Intra-chr q14.1 q21.1 100379 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF18-ACACB ARHGEF18 chr19 7395247 + ACACB chr12 109197008 + Exonic hg38 SARC TCGA-3B-A9HS-01A 136 614 5'UTR-3'UTR Inter-chr p13.2 q24.11 Seq+ 100380 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACACA-GLIPR1L2 ACACA chr17 37330173 - GLIPR1L2 chr12 75422904 + Exonic hg38 SARC TCGA-3B-A9HS-01A 164 343 5'UTR-5'UTR Inter-chr q21.2 Seq+ 100381 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP1-FAM19A2 LRP1 chr12 57175705 + FAM19A2 chr12 61710417 - Exonic hg38 SARC TCGA-3B-A9HS-01A 62 214 Out-of-frame Intra-chr q13.3 q14.1 Seq+ 100382 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAP1L1-ELK3 NAP1L1 chr12 76084567 - ELK3 chr12 96223565 + Exonic hg38 SARC TCGA-3B-A9HS-01A 34 133 5'UTR-5'UTR Intra-chr q21.2 q23.1 Transcription factor 100383 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPDL1-SCGB3A2 SPDL1 chr5 169583889 + SCGB3A2 chr5 147881446 + Exonic hg38 SARC TCGA-3B-A9HS-01A 33 123 5'UTR-CDS Intra-chr q35.1 q32 100384 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFT81-INSR IFT81 chr12 110136860 + INSR chr19 7184637 - Exonic hg38 SARC TCGA-3B-A9HS-01A 27 99 In-Frame Inter-chr q24.11 p13.2 TK:InsR Seq+ 100385 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPH1-INSR HNRNPH1 chr5 179617984 - INSR chr19 7184637 - Exonic hg38 SARC TCGA-3B-A9HS-01A 14 92 5'UTR-CDS Inter-chr q35.3 p13.2 TK:InsR Seq+ 100386 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKLE2-MGAT1 ANKLE2 chr12 132747832 - MGAT1 chr5 180793097 - Exonic hg38 SARC TCGA-3B-A9HS-01A 18 70 CDS-5'UTR Inter-chr q24.33 q35.3 Seq+ 100387 ChimerSeq TCGA FAWG TCGA_RNA-Seq COG1-TK1 COG1 chr17 73201313 + TK1 chr17 78182686 - Exonic hg38 SARC TCGA-3B-A9HS-01A 18 53 Out-of-frame Intra-chr q25.1 q25.3 100388 ChimerSeq TCGA FAWG TCGA_RNA-Seq BEST3-CCT2 BEST3 chr12 69643689 - CCT2 chr12 69601295 + Exonic hg38 SARC TCGA-3B-A9HS-01A 7 70 3'UTR-CDS Intra-chr q15 q15 100389 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP16-ACSS3 USP16 chr21 29024777 + ACSS3 chr12 81151844 + Exonic hg38 SARC TCGA-3B-A9HS-01A 10 47 5'UTR-5'UTR Inter-chr q21.3 q21.31 Seq+ 100390 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLIPR1-CDK17 GLIPR1 chr12 75482079 + CDK17 chr12 96334865 - Exonic hg38 SARC TCGA-3B-A9HS-01A 6 43 CDS-5'UTR Intra-chr q21.2 Tumor suppressor gene q23.1 Seq+ 100391 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFXN1-LYZ SFXN1 chr5 175492267 + LYZ chr12 69352220 + Exonic hg38 SARC TCGA-3B-A9HS-01A 7 36 In-Frame Inter-chr q35.2 q15 100392 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCSK5-DENND1A PCSK5 chr9 76027037 + DENND1A chr9 123879021 - Exonic hg38 SARC TCGA-3B-A9HS-01A 2 47 In-Frame Intra-chr q21.13 q33.3 Seq+ 100393 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACACB-MARCH9 ACACB chr12 109237380 + 2019_ 3_ 9_ chr12 57756929 + Exonic hg38 SARC TCGA-3B-A9HS-01A 6 30 Out-of-frame Intra-chr q24.11 q14.1 Seq+ 100394 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC35E3-L3MBTL3 SLC35E3 chr12 68752190 + L3MBTL3 chr6 130133452 + Exonic hg38 SARC TCGA-3B-A9HS-01A 4 35 Out-of-frame Inter-chr q15 q23.1 Transcription factor Seq+ 100395 ChimerSeq TCGA FAWG TCGA_RNA-Seq BACH1-OSBPL8 BACH1 chr21 29329693 + OSBPL8 chr12 76358811 - Exonic hg38 SARC TCGA-3B-A9HS-01A 7 21 In-Frame Inter-chr q21.3 Transcription factor q21.2 Seq+ 100396 ChimerSeq TCGA FAWG TCGA_RNA-Seq GFPT2-PPFIA2 GFPT2 chr5 180330700 - PPFIA2 chr12 81353339 - Exonic hg38 SARC TCGA-3B-A9HS-01A 3 32 In-Frame Inter-chr q35.3 q21.31 Seq+ 100397 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA2-NUP107 LAMA2 chr6 129320655 + NUP107 chr12 68741813 + Exonic hg38 SARC TCGA-3B-A9HS-01A 4 25 In-Frame Inter-chr q22.33 q15 Seq+ 100398 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACSS3-METTL21B ACSS3 chr12 81109704 + METTL21B chr12 57773017 + Exonic hg38 SARC TCGA-3B-A9HS-01A 5 16 Out-of-frame Intra-chr q21.31 100399 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTFR2-GFPT2 MTFR2 chr6 136250264 - GFPT2 chr5 180338600 - Exonic hg38 SARC TCGA-3B-A9HS-01A 4 14 5'UTR-CDS Inter-chr q23.3 q35.3 100400 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEX3-SLC35F1 PEX3 chr6 143474856 + SLC35F1 chr6 118314028 + Exonic hg38 SARC TCGA-3B-A9HS-01A 4 14 Out-of-frame Intra-chr q24.2 q22.2 Seq+ 100401 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM167B-LYPLA1 TMEM167B chr1 109093021 + LYPLA1 chr8 54055133 - Exonic hg38 SARC TCGA-3B-A9HS-01A 3 18 In-Frame Inter-chr p13.3 q11.23 Seq+ 100402 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2C1-TMEM241 ATP2C1 chr3 130941699 + TMEM241 chr18 23309744 - Exonic hg38 SARC TCGA-3B-A9HS-01A 4 11 In-Frame Inter-chr q22.1 q11.2 100403 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGAT4C-METTL25 MGAT4C chr12 86838666 - METTL25 chr12 82477281 + Exonic hg38 SARC TCGA-3B-A9HS-01A 3 14 5'UTR-5'UTR Intra-chr q21.31 100404 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGAT4C-PPFIA2 MGAT4C chr12 86334065 - PPFIA2 chr12 81263390 - Exonic hg38 SARC TCGA-3B-A9HS-01A 3 12 5'UTR-CDS Intra-chr q21.31 Seq+ 100405 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEDD1-TMTC2 NEDD1 chr12 96920125 + TMTC2 chr12 82895818 + Exonic hg38 SARC TCGA-3B-A9HS-01A 3 11 In-Frame Intra-chr q23.1 q21.31 Seq+ 100406 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP2-RAB21 AGAP2 chr12 57729639 - RAB21 chr12 71785531 + Exonic hg38 SARC TCGA-3B-A9HS-01A 4 6 In-Frame Intra-chr q14.1 q21.1 Seq+ 100407 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF557-TCHP ZNF557 chr19 7070653 + TCHP chr12 109980905 + Exonic hg38 SARC TCGA-3B-A9HS-01A 3 9 5'UTR-3'UTR Inter-chr p13.2 Transcription factor q24.11 Tumor suppressor gene 100408 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT6-ACSS3 CNOT6 chr5 180567242 + ACSS3 chr12 81109560 + Exonic hg38 SARC TCGA-3B-A9HS-01A 1 16 In-Frame Inter-chr q35.3 q21.31 100409 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMTC3-OSBPL8 TMTC3 chr12 88176319 + OSBPL8 chr12 76358811 - Exonic hg38 SARC TCGA-3B-A9HS-01A 1 16 Out-of-frame Intra-chr q21.32 q21.2 Seq+ 100410 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNK-SPOP UNK chr17 75784984 + SPOP chr17 49622876 - Exonic hg38 SARC TCGA-3B-A9HS-01A 1 15 5'UTR-5'UTR Intra-chr q25.1 q21.33 Oncogene Tumor suppressor gene Seq+ 100411 ChimerSeq TCGA FAWG TCGA_RNA-Seq LTA4H-LAMA2 LTA4H chr12 96035361 - LAMA2 chr6 129250112 + Exonic hg38 SARC TCGA-3B-A9HS-01A 2 6 In-Frame Inter-chr q23.1 q22.33 100412 ChimerSeq TCGA FAWG TCGA_RNA-Seq TK1-ENDOV TK1 chr17 78185055 - ENDOV chr17 80436133 + Exonic hg38 SARC TCGA-3B-A9HS-01A 1 10 Out-of-frame Intra-chr q25.3 q25.3 100413 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF13-LYPLA1 TAF13 chr1 109074987 - LYPLA1 chr8 54055133 - Exonic hg38 SARC TCGA-3B-A9HS-01A 2 5 In-Frame Inter-chr p13.3 q11.23 Seq+ 100414 ChimerSeq TCGA FAWG TCGA_RNA-Seq BEST3-PTPRR BEST3 chr12 69671428 - PTPRR chr12 70764778 - Exonic hg38 SARC TCGA-3B-A9HS-01A 2 4 Out-of-frame Intra-chr q15 q15 Seq+ 100415 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT6-TSPAN8 CNOT6 chr5 180550117 + TSPAN8 chr12 71157787 - Exonic hg38 SARC TCGA-3B-A9HS-01A 1 8 5'UTR-5'UTR Inter-chr q35.3 q21.1 Seq+ 100416 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPDL1-ANXA6 SPDL1 chr5 169583889 + ANXA6 chr5 151101507 - Exonic hg38 SARC TCGA-3B-A9HS-01A 1 6 5'UTR-CDS Intra-chr q35.1 q33.1 100417 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTPS1-FOXO6 CTPS1 chr1 41010254 + FOXO6 chr1 41381616 + Exonic hg38 SARC TCGA-3B-A9HS-01A 1 2 3'UTR-3'UTR Intra-chr p34.2 Tumor suppressor gene Transcription factor 100418 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLIT3-PPARGC1B SLIT3 chr5 169244705 - PPARGC1B chr5 149845760 + Exonic hg38 SARC TCGA-3B-A9HS-01A 1 1 In-Frame Intra-chr q35.1 q32 100419 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDM1-INSR MDM1 chr12 68302620 - INSR chr19 7152927 - Exonic hg38 SARC TCGA-3B-A9HS-01A 1000 1000 In-Frame Inter-chr q15 p13.2 TK:InsR Seq+ 100420 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT10-SAP30L GALNT10 chr5 154218149 + SAP30L chr5 154453402 + Exonic hg38 SARC TCGA-3B-A9HU-01A 1 10 CDS-5'UTR Intra-chr q33.2 q33.2 100421 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL4A1-GABBR2 COL4A1 chr13 110187204 - GABBR2 chr9 98309784 - Exonic hg38 SARC TCGA-3B-A9HV-01A 26 79 Out-of-frame Inter-chr q34 q22.33 100422 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV1-CACNA2D1 ETV1 chr7 13977427 - CACNA2D1 chr7 82066524 - Exonic hg38 SARC TCGA-3B-A9HV-01A 19 80 In-Frame Intra-chr p21.2 Oncogene Transcription factor q21.11 Seq+ 100423 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF165-PHLPP1 RNF165 chr18 46334335 + PHLPP1 chr18 62941718 + Exonic hg38 SARC TCGA-3B-A9HV-01A 10 42 Out-of-frame Intra-chr q21.1 q21.33 Tumor suppressor gene Seq+ 100424 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF462-ZBED2 ZNF462 chr9 106939107 + ZBED2 chr3 111595066 - Exonic hg38 SARC TCGA-3B-A9HV-01A 3 21 CDS-5'UTR Inter-chr q31.2 Transcription factor q13.13 Transcription factor Seq+ 100425 ChimerSeq TCGA FAWG TCGA_RNA-Seq KBTBD11-MYOM2 KBTBD11 chr8 1973935 + MYOM2 chr8 2115960 + Exonic hg38 SARC TCGA-3B-A9HV-01A 5 10 3'UTR-3'UTR Intra-chr p23.3 100426 ChimerSeq TCGA FAWG TCGA_RNA-Seq C9orf3-ZNF462 C9orf3 chr9 95060810 + ZNF462 chr9 106923354 + Exonic hg38 SARC TCGA-3B-A9HV-01A 2 18 Out-of-frame Intra-chr q22.32 q31.2 Transcription factor Seq+ 100427 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK3-CSNK1A1 DOCK3 chr3 50778758 + CSNK1A1 chr5 149525171 - Exonic hg38 SARC TCGA-3B-A9HV-01A 3 13 Out-of-frame Inter-chr p21.2 q32 Tumor suppressor gene Seq+ 100428 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPM2-CNTROB TPM2 chr9 35685064 - CNTROB chr17 7949385 + Exonic hg38 SARC TCGA-3B-A9HV-01A 3 5 In-Frame Inter-chr p13.3 p13.1 100429 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERCC6L2-CDC14B ERCC6L2 chr9 96004701 + CDC14B chr9 96541892 - Exonic hg38 SARC TCGA-3B-A9HV-01A 3 4 In-Frame Intra-chr q22.32 q22.33 100430 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM35A-SLC25A43 TMEM35A chrX 101079122 + SLC25A43 chrX 119452009 + Exonic hg38 SARC TCGA-3B-A9HV-01A 1 5 In-Frame Intra-chr q22.1 q24 100431 ChimerSeq TCGA FAWG TCGA_RNA-Seq LSM4-OVOL3 LSM4 chr19 18323018 - OVOL3 chr19 36111369 + Exonic hg38 SARC TCGA-3B-A9HX-01A 20 487 Out-of-frame Intra-chr p13.11 q13.12 Transcription factor 100432 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIAS4-ZNF787 PIAS4 chr19 4033580 + ZNF787 chr19 56103227 - Exonic hg38 SARC TCGA-3B-A9HX-01A 49 137 CDS-5'UTR Intra-chr p13.3 q13.43 Transcription factor Seq+ 100433 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIN3B-TBC1D17 SIN3B chr19 16876578 + TBC1D17 chr19 49880279 + Exonic hg38 SARC TCGA-3B-A9HX-01A 29 215 In-Frame Intra-chr p13.11 q13.33 Seq+ 100434 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPM4-IGFL2 TPM4 chr19 16067738 + IGFL2 chr19 46160415 + Exonic hg38 SARC TCGA-3B-A9HX-01A 33 103 Out-of-frame Intra-chr p13.12 q13.32 Seq+ 100435 ChimerSeq TCGA FAWG TCGA_RNA-Seq FHL2-UNC93B5 FHL2 chr2 105386361 - UNC93B5 chr11 67716005 - Exonic hg38 SARC TCGA-3B-A9HX-01A 9 9 Out-of-frame Inter-chr q12.2 q13.2 100436 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H4-KANK3 ZC3H4 chr19 47110895 - KANK3 chr19 8325096 - Exonic hg38 SARC TCGA-3B-A9HX-01A 7 14 Out-of-frame Intra-chr q13.32 p13.2 Seq+ 100437 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPM-ZNF788 HNRNPM chr19 8455574 + ZNF788 chr19 12111246 + Exonic hg38 SARC TCGA-3B-A9HX-01A 1 32 Out-of-frame Intra-chr p13.2 p13.2 Transcription factor 100438 ChimerSeq TCGA FAWG TCGA_RNA-Seq TGFB1-CCDC97 TGFB1 chr19 41332128 - CCDC97 chr19 41316384 + Exonic hg38 SARC TCGA-3B-A9HX-01A 5 16 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 Seq+ 100439 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF431-SIGLEC6 ZNF431 chr19 21143643 + SIGLEC6 chr19 51531519 - Exonic hg38 SARC TCGA-3B-A9HX-01A 5 14 Out-of-frame Intra-chr p12 Transcription factor q13.41 Seq+ 100440 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF569-ZNF497 ZNF569 chr19 37444907 - ZNF497 chr19 58358585 - Exonic hg38 SARC TCGA-3B-A9HX-01A 5 14 5'UTR-5'UTR Intra-chr q13.12 Transcription factor q13.43 Transcription factor 100441 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF416-ACTN4 ZNF416 chr19 57578057 - ACTN4 chr19 38700600 + Exonic hg38 SARC TCGA-3B-A9HX-01A 2 16 CDS-3'UTR Intra-chr q13.43 Transcription factor 100442 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF17-ARHGAP35 ZNF17 chr19 57411406 + ARHGAP35 chr19 46987989 + Exonic hg38 SARC TCGA-3B-A9HX-01A 1 5 Out-of-frame Intra-chr q13.43 Transcription factor q13.32 Transcription factor 100443 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF799-SIGLECL1 ZNF799 chr19 12401068 - SIGLECL1 chr19 51263883 + Exonic hg38 SARC TCGA-3B-A9HX-01A 1 4 5'UTR-5'UTR Intra-chr p13.2 Transcription factor q13.41 100444 ChimerSeq TCGA FAWG TCGA_RNA-Seq SORBS1-FAM135B SORBS1 chr10 95346406 - FAM135B chr8 138243068 - Exonic hg38 SARC TCGA-3B-A9HY-01A 44 126 In-Frame Inter-chr q24.1 q24.23 Seq+ 100445 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPL-MAP4K1 HNRNPL chr19 38852296 - MAP4K1 chr19 38597384 - Exonic hg38 SARC TCGA-3B-A9HY-01A 7 8 5'UTR-5'UTR Intra-chr Tumor suppressor gene 100446 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM20B-RALGPS2 FAM20B chr1 179026098 + RALGPS2 chr1 178889642 + Exonic hg38 SARC TCGA-3B-A9HY-01A 2 1 5'UTR-CDS Intra-chr q25.2 q25.2 Seq+ 100447 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF217-RSPO3 RNF217 chr6 124963426 + RSPO3 chr6 127195823 + Exonic hg38 SARC TCGA-3B-A9HZ-01A 3 55 Out-of-frame Intra-chr q22.31 q22.33 Seq+ 100448 ChimerSeq TCGA FAWG TCGA_RNA-Seq REV3L-C4B REV3L chr6 111405470 - C4B chr6 32034514 + Exonic hg38 SARC TCGA-3B-A9HZ-01A 2 11 CDS-3'UTR Intra-chr q21 100449 ChimerSeq TCGA FAWG TCGA_RNA-Seq INPP5A-TUBGCP2 INPP5A chr10 132607956 + TUBGCP2 chr10 133302980 - Exonic hg38 SARC TCGA-3B-A9I1-01A 1 5 CDS-5'UTR Intra-chr q26.3 q26.3 100450 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM126A-STEAP1B FAM126A chr7 22976210 - STEAP1B chr7 22419836 - Exonic hg38 SARC TCGA-3B-A9I3-01A 36 252 Out-of-frame Intra-chr p15.3 p15.3 100451 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R18-TNXB PPP1R18 chr6 30684408 - TNXB chr6 32053711 - Exonic hg38 SARC TCGA-3B-A9I3-01A 7 20 5'UTR-5'UTR Intra-chr p21.33 100452 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDB1-SDHA DDB1 chr11 61313499 - SDHA chr5 235144 + Exonic hg38 SARC TCGA-3R-A8YX-01A 9 48 In-Frame Inter-chr q12.2 p15.33 Oncogene Tumor suppressor gene Seq+ 100453 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT2-SSH3 CNOT2 chr12 70243480 + SSH3 chr11 67307371 + Exonic hg38 SARC TCGA-3R-A8YX-01A 13 11 5'UTR-CDS Inter-chr q15 q13.2 Seq+ 100454 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-MS4A8 UVRAG chr11 76007621 + MS4A8 chr11 60703378 + Exonic hg38 SARC TCGA-3R-A8YX-01A 6 23 In-Frame Intra-chr q13.5 Tumor suppressor gene q12.2 Seq+ 100455 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEXN-PTGFR NEXN chr1 77888759 + PTGFR chr1 78492672 + Exonic hg38 SARC TCGA-3R-A8YX-01A 6 14 5'UTR-5'UTR Intra-chr p31.1 p31.1 Seq+ 100456 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACSS3-AVIL ACSS3 chr12 81078431 + AVIL chr12 57811127 - Exonic hg38 SARC TCGA-3R-A8YX-01A 5 11 In-Frame Intra-chr q21.31 q14.1 Seq+ 100457 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT2-CPM CNOT2 chr12 70278274 + CPM chr12 68932840 - Exonic hg38 SARC TCGA-3R-A8YX-01A 1 4 5'UTR-5'UTR Intra-chr q15 q15 100458 ChimerSeq TCGA FAWG TCGA_RNA-Seq YEATS4-NME7 YEATS4 chr12 69365884 + NME7 chr1 169132817 - Exonic hg38 SARC TCGA-DX-A1KU-01A 53 434 In-Frame Inter-chr q15 q24.2 Seq+ 100459 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAP1B-DPT RAP1B chr12 68611043 + DPT chr1 168714346 - Exonic hg38 SARC TCGA-DX-A1KU-01A 55 258 5'UTR-CDS Inter-chr q15 q24.2 Seq+ 100460 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAS5-ACP6 GAS5 chr1 173866528 - ACP6 chr1 147631065 - Exonic hg38 SARC TCGA-DX-A1KU-01A 16 270 3'UTR-3'UTR Intra-chr q25.1 Tumor suppressor gene q21.2 100461 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND1B-TSPAN31 DENND1B chr1 197772868 - TSPAN31 chr12 57746589 + Exonic hg38 SARC TCGA-DX-A1KU-01A 10 126 Out-of-frame Inter-chr q31.3 q14.1 Seq+ 100462 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPM-CCT2 CPM chr12 68885792 - CCT2 chr12 69592976 + Exonic hg38 SARC TCGA-DX-A1KU-01A 16 96 In-Frame Intra-chr q15 q15 Seq+ 100463 ChimerSeq TCGA FAWG TCGA_RNA-Seq UEVLD-PRMT3 UEVLD chr11 18588613 - PRMT3 chr11 20452130 + Exonic hg38 SARC TCGA-DX-A1KU-01A 15 100 In-Frame Intra-chr p15.1 p15.1 Transcription factor Seq+ 100464 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF3M-UEVLD EIF3M chr11 32596047 + UEVLD chr11 18570377 - Exonic hg38 SARC TCGA-DX-A1KU-01A 6 128 In-Frame Intra-chr p13 p15.1 Seq+ 100465 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRIG3-SLC16A7 LRIG3 chr12 58874055 - SLC16A7 chr12 59771219 + Exonic hg38 SARC TCGA-DX-A1KU-01A 6 58 In-Frame Intra-chr q14.1 Tumor suppressor gene q14.1 Seq+ 100466 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSP2-RALB CTDSP2 chr12 57846372 - RALB chr2 120278618 + Exonic hg38 SARC TCGA-DX-A1KU-01A 13 26 CDS-5'UTR Inter-chr q14.1 q14.2 100467 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDM1-RBMS2 MDM1 chr12 68332228 - RBMS2 chr12 56581184 + Exonic hg38 SARC TCGA-DX-A1KU-01A 8 37 Out-of-frame Intra-chr q15 q13.3 Seq+ 100468 ChimerSeq TCGA FAWG TCGA_RNA-Seq UCHL5-C1orf112 UCHL5 chr1 193021097 - C1orf112 chr1 169849500 + Exonic hg38 SARC TCGA-DX-A1KU-01A 4 48 In-Frame Intra-chr q31.2 q24.2 Seq+ 100469 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRG4-ZNF215 PRRG4 chr11 32840239 + ZNF215 chr11 6932094 + Exonic hg38 SARC TCGA-DX-A1KU-01A 4 37 CDS-5'UTR Intra-chr p13 p15.4 Transcription factor Seq+ 100470 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARCH6-GALNT18 2019_ 3_ 6_ chr5 10411537 + GALNT18 chr11 11379264 - Exonic hg38 SARC TCGA-DX-A1KU-01A 8 18 Out-of-frame Inter-chr p15.2 p15.4 100471 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB37-FSD1L ZBTB37 chr1 173888764 + FSD1L chr9 105549091 + Exonic hg38 SARC TCGA-DX-A1KU-01A 8 18 Out-of-frame Inter-chr q25.1 Transcription factor q31.2 100472 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASPM-PIGC ASPM chr1 197146141 - PIGC chr1 172415374 - Exonic hg38 SARC TCGA-DX-A1KU-01A 4 31 CDS-3'UTR Intra-chr q31.3 q24.3 100473 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICAL2-NELL1 MICAL2 chr11 12162419 + NELL1 chr11 21370853 + Exonic hg38 SARC TCGA-DX-A1KU-01A 5 25 Out-of-frame Intra-chr p15.3 p15.1 Seq+ 100474 ChimerSeq TCGA FAWG TCGA_RNA-Seq CFH-ASPM CFH chr1 196726940 + ASPM chr1 197142429 - Exonic hg38 SARC TCGA-DX-A1KU-01A 4 25 Out-of-frame Intra-chr q31.3 q31.3 100475 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLGAP1-METTL4 DLGAP1 chr18 3814059 - METTL4 chr18 2567654 - Exonic hg38 SARC TCGA-DX-A1KU-01A 3 11 CDS-5'UTR Intra-chr p11.31 p11.32 Seq+ 100476 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF8-CD1C DCAF8 chr1 160237135 - CD1C chr1 158291134 + Exonic hg38 SARC TCGA-DX-A1KU-01A 2 13 Out-of-frame Intra-chr q23.2 q23.1 100477 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT18-PARVA GALNT18 chr11 11621359 - PARVA chr11 12527849 + Exonic hg38 SARC TCGA-DX-A1KU-01A 2 12 In-Frame Intra-chr p15.4 p15.3 100478 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDM2-DDR2 MDM2 chr12 68820374 + DDR2 chr1 162655211 + Exonic hg38 SARC TCGA-DX-A1KU-01A 3 7 CDS-5'UTR Inter-chr q15 Oncogene q23.3 TK:DDR Oncogene Tumor suppressor gene 100479 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUCO-GLIPR1L1 SUCO chr1 172585948 + GLIPR1L1 chr12 75363102 + Exonic hg38 SARC TCGA-DX-A1KU-01A 1 13 In-Frame Inter-chr q24.3 q21.2 100480 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNS-SLC16A7 GNS chr12 64752698 - SLC16A7 chr12 59779423 + Exonic hg38 SARC TCGA-DX-A1KU-01A 2 5 Out-of-frame Intra-chr q14.3 q14.1 Seq+ 100481 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP1B1-IL26 ATP1B1 chr1 169111498 + IL26 chr12 68225283 - Exonic hg38 SARC TCGA-DX-A1KU-01A 1 8 Out-of-frame Inter-chr q24.2 q15 Seq+ 100482 ChimerSeq TCGA FAWG TCGA_RNA-Seq NME7-CCDC181 NME7 chr1 169367708 - CCDC181 chr1 169424950 - Exonic hg38 SARC TCGA-DX-A1KU-01A 1 8 5'UTR-5'UTR Intra-chr q24.2 q24.2 100483 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDM1-RAP1B MDM1 chr12 68313443 - RAP1B chr12 68650400 + Exonic hg38 SARC TCGA-DX-A1KU-01A 2 2 In-Frame Intra-chr q15 q15 100484 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP15-TPH2 USP15 chr12 62306058 + TPH2 chr12 72105648 + Exonic hg38 SARC TCGA-DX-A1KU-01A 1 6 5'UTR-3'UTR Intra-chr q14.1 q21.1 100485 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA3-PTPRT NCOA3 chr20 47502019 + PTPRT chr20 42472562 - Exonic hg38 SARC TCGA-DX-A1KU-01A 1 4 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.11 Oncogene Tumor suppressor gene Seq+ 100486 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARVA-HBG2 PARVA chr11 12377783 + HBG2 chr11 5345899 - Exonic hg38 SARC TCGA-DX-A1KU-01A 1 4 CDS-5'UTR Intra-chr p15.3 p15.4 100487 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERGEF-HBE1 SERGEF chr11 17988597 - HBE1 chr11 5270156 - Exonic hg38 SARC TCGA-DX-A1KU-01A 1 4 CDS-5'UTR Intra-chr p15.1 p15.4 Seq+ 100488 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM2-RAP1B R3HDM2 chr12 57430720 - RAP1B chr12 68650400 + Exonic hg38 SARC TCGA-DX-A1KU-01A 1000 1000 5'UTR-CDS Intra-chr q13.3 q15 100489 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN11-EPYC PTPN11 chr12 112456063 + EPYC chr12 90978262 - Exonic hg38 SARC TCGA-DX-A1KW-01A 518 1140 In-Frame Intra-chr q24.13 Oncogene Tumor suppressor gene q21.33 Seq+ 100490 ChimerSeq TCGA FAWG TCGA_RNA-Seq PWP1-CCDC63 PWP1 chr12 107704747 + CCDC63 chr12 110893076 + Exonic hg38 SARC TCGA-DX-A1KW-01A 228 546 In-Frame Intra-chr q23.3 q24.11 Seq+ 100491 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNS-NUP107 GNS chr12 64737004 - NUP107 chr12 68709238 + Exonic hg38 SARC TCGA-DX-A1KW-01A 97 337 In-Frame Intra-chr q14.3 q15 Seq+ 100492 ChimerSeq TCGA FAWG TCGA_RNA-Seq HECTD4-AMDHD1 HECTD4 chr12 112381952 - AMDHD1 chr12 95966348 + Exonic hg38 SARC TCGA-DX-A1KW-01A 43 108 In-Frame Intra-chr q24.13 q23.1 Seq+ 100493 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMKK2-DIP2B CAMKK2 chr12 121296638 - DIP2B chr12 50625976 + Exonic hg38 SARC TCGA-DX-A1KW-01A 14 70 5'UTR-CDS Intra-chr q24.31 q13.12 Seq+ 100494 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHPT1-ATXN2 CHPT1 chr12 101698134 + ATXN2 chr12 111510582 - Exonic hg38 SARC TCGA-DX-A1KW-01A 10 82 Out-of-frame Intra-chr q23.2 q24.12 Seq+ 100495 ChimerSeq TCGA FAWG TCGA_RNA-Seq KRR1-CDK17 KRR1 chr12 75499813 - CDK17 chr12 96313454 - Exonic hg38 SARC TCGA-DX-A1KW-01A 8 24 Out-of-frame Intra-chr q21.2 q23.1 Seq+ 100496 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC17-CSRP2 ZDHHC17 chr12 76764329 + CSRP2 chr12 76866261 - Exonic hg38 SARC TCGA-DX-A1KW-01A 4 32 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 100497 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCT2-OR8S1 CCT2 chr12 69586818 + OR8S1 chr12 48528503 + Exonic hg38 SARC TCGA-DX-A1KW-01A 4 31 CDS-3'UTR Intra-chr q15 q13.11 Seq+ 100498 ChimerSeq TCGA FAWG TCGA_RNA-Seq KNTC1-BTBD11 KNTC1 chr12 122580670 + BTBD11 chr12 107659361 + Exonic hg38 SARC TCGA-DX-A1KW-01A 7 18 CDS-3'UTR Intra-chr q24.31 q23.3 Seq+ 100499 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM120B-GRIP1 TMEM120B chr12 121773513 + GRIP1 chr12 66379436 - Exonic hg38 SARC TCGA-DX-A1KW-01A 6 21 In-Frame Intra-chr q24.31 q14.3 Seq+ 100500 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLIP1-MORN3 CLIP1 chr12 122332987 - MORN3 chr12 121669512 - Exonic hg38 SARC TCGA-DX-A1KW-01A 1 4 CDS-5'UTR Intra-chr q24.31 q24.31 100501 ChimerSeq TCGA FAWG TCGA_RNA-Seq FMNL3-HECTD4 FMNL3 chr12 49707057 - HECTD4 chr12 112283304 - Exonic hg38 SARC TCGA-DX-A1KW-01A 1000 1000 Out-of-frame Intra-chr q13.12 q24.13 100502 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN11-MYRFL PTPN11 chr12 112419124 + MYRFL chr12 69903643 + Exonic hg38 SARC TCGA-DX-A1KW-01A 1000 1000 Out-of-frame Intra-chr q24.13 Oncogene Tumor suppressor gene q15 Transcription factor 100503 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL9L-DGKI BCL9L chr11 118925238 - DGKI chr7 137690002 - Exonic hg38 SARC TCGA-DX-A1KX-01A 9 53 5'UTR-5'UTR Inter-chr q23.3 q33 Seq+ 100504 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHRDL1-SLC25A5 CHRDL1 chrX 110719835 - SLC25A5 chrX 119468523 + Exonic hg38 SARC TCGA-DX-A1KX-01A 4 45 Out-of-frame Intra-chr q23 q24 100505 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF98-ACTR5 ZNF98 chr19 22514364 - ACTR5 chr20 38771559 + Exonic hg38 SARC TCGA-DX-A1KX-01A 7 22 5'UTR-CDS Inter-chr p12 Transcription factor q11.23 100506 ChimerSeq TCGA FAWG TCGA_RNA-Seq STEAP4-PON1 STEAP4 chr7 88306792 - PON1 chr7 95316789 - Exonic hg38 SARC TCGA-DX-A1KX-01A 1 35 5'UTR-CDS Intra-chr q21.12 q21.3 100507 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM180A-AHCYL2 FAM180A chr7 135737099 - AHCYL2 chr7 129379638 + Exonic hg38 SARC TCGA-DX-A1KX-01A 3 21 In-Frame Intra-chr q33 q32.1 Seq+ 100508 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNF4A-MYBL2 HNF4A chr20 44407475 + MYBL2 chr20 43711488 + Exonic hg38 SARC TCGA-DX-A1KX-01A 4 11 Out-of-frame Intra-chr q13.12 Tumor suppressor gene Transcription factor q13.12 Transcription factor Seq+ 100509 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARL15-PARP8 ARL15 chr5 54310432 - PARP8 chr5 50750151 + Exonic hg38 SARC TCGA-DX-A1KX-01A 1 20 Out-of-frame Intra-chr q11.2 q11.1 Seq+ 100510 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLIC2-MAMLD1 CLIC2 chrX 155334371 - MAMLD1 chrX 150469745 + Exonic hg38 SARC TCGA-DX-A1KX-01A 3 9 5'UTR-CDS Intra-chr q28 q28 Seq+ 100511 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRD-MTERF4 PTPRD chr9 8633317 - MTERF4 chr2 241075682 - Exonic hg38 SARC TCGA-DX-A1KX-01A 2 8 CDS-3'UTR Inter-chr Oncogene Tumor suppressor gene q37.3 Transcription factor 100512 ChimerSeq TCGA FAWG TCGA_RNA-Seq YAP1-REG4 YAP1 chr11 102114394 + REG4 chr1 119798602 - Exonic hg38 SARC TCGA-DX-A1KX-01A 2 6 Out-of-frame Inter-chr q22.1 Tumor suppressor gene p12 100513 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEKT4P2-TMLHE TEKT4P2 chr21 9127489 - TMLHE chrX 155545277 - Exonic hg38 SARC TCGA-DX-A1KX-01A 1 9 3'UTR-5'UTR Inter-chr p11.2 q28 100514 ChimerSeq TCGA FAWG TCGA_RNA-Seq PFKFB3-PALM2 PFKFB3 chr10 6226365 + PALM2 chr9 109867491 + Exonic hg38 SARC TCGA-DX-A1KX-01A 1 6 Out-of-frame Inter-chr p15.1 q31.3 100515 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC6A8-PREP SLC6A8 chrX 153688836 + PREP chr6 105397927 - Exonic hg38 SARC TCGA-DX-A1KX-01A 1 4 Out-of-frame Inter-chr q28 q21 Seq+ 100516 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARFGEF2-HNF4A ARFGEF2 chr20 48922010 + HNF4A chr20 44406058 + Exonic hg38 SARC TCGA-DX-A1KX-01A 1 3 In-Frame Intra-chr q13.13 q13.12 Tumor suppressor gene Transcription factor Seq+ 100517 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUCO-CXorf21 SUCO chr1 172557794 + CXorf21 chrX 30576866 - Exonic hg38 SARC TCGA-DX-A1KY-01A 23 387 5'UTR-5'UTR Inter-chr q24.3 p21.2 Seq+ 100518 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM220A-SCGB1A1 FAM220A chr7 6348573 - SCGB1A1 chr11 62422221 + Exonic hg38 SARC TCGA-DX-A1KY-01A 14 271 5'UTR-CDS Inter-chr p22.1 q12.3 Seq+ 100519 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDBF2-PSMD1 ZDBF2 chr2 206281909 + PSMD1 chr2 231138736 + Exonic hg38 SARC TCGA-DX-A1KY-01A 28 112 3'UTR-CDS Intra-chr q37.1 Seq+ 100520 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB5A-PLCL2 RAB5A chr3 19951061 + PLCL2 chr3 17009674 + Exonic hg38 SARC TCGA-DX-A1KY-01A 17 147 CDS-3'UTR Intra-chr p24.3 Seq+ 100521 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH1L-SELL ASH1L chr1 155562153 - SELL chr1 169696553 - Exonic hg38 SARC TCGA-DX-A1KY-01A 18 123 5'UTR-CDS Intra-chr q22 Transcription factor q24.2 Seq+ 100522 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUF2-PHEX NUF2 chr1 163340426 + PHEX chrX 22133523 + Exonic hg38 SARC TCGA-DX-A1KY-01A 15 83 In-Frame Inter-chr q23.3 p22.11 Seq+ 100523 ChimerSeq TCGA FAWG TCGA_RNA-Seq SP3-CYBRD1 SP3 chr2 173963761 - CYBRD1 chr2 171553346 + Exonic hg38 SARC TCGA-DX-A1KY-01A 19 18 In-Frame Intra-chr q31.1 Transcription factor q31.1 Seq+ 100524 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDFY1-PARD3B WDFY1 chr2 223945148 - PARD3B chr2 205499896 + Exonic hg38 SARC TCGA-DX-A1KY-01A 9 57 In-Frame Intra-chr q36.1 q33.3 Seq+ 100525 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP24-STAC ARHGAP24 chr4 85475559 + STAC chr3 36528696 + Exonic hg38 SARC TCGA-DX-A1KY-01A 10 43 5'UTR-CDS Inter-chr q21.23 p22.3 Seq+ 100526 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF558-CERS4 ZNF558 chr19 8831318 - CERS4 chr19 8261688 + Exonic hg38 SARC TCGA-DX-A1KY-01A 6 55 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.2 Seq+ 100527 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBBP7-TTC24 RBBP7 chrX 16870038 - TTC24 chr1 156582231 + Exonic hg38 SARC TCGA-DX-A1KY-01A 11 33 In-Frame Inter-chr p22.2 Tumor suppressor gene q22 Seq+ 100528 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL11RA-WDR72 IL11RA chr9 34652233 + WDR72 chr15 53597274 - Exonic hg38 SARC TCGA-DX-A1KY-01A 6 49 5'UTR-CDS Inter-chr p13.3 q21.3 Seq+ 100529 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRK-ABR CRK chr17 1436790 - ABR chr17 1125367 - Exonic hg38 SARC TCGA-DX-A1KY-01A 8 32 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 100530 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRIP1-DAZL GRIP1 chr12 66377174 - DAZL chr3 16592148 - Exonic hg38 SARC TCGA-DX-A1KY-01A 4 43 In-Frame Inter-chr q14.3 p24.3 Seq+ 100531 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP4R2-FBXW7 PPP4R2 chr3 72998158 + FBXW7 chr4 152412529 - Exonic hg38 SARC TCGA-DX-A1KY-01A 5 39 5'UTR-5'UTR Inter-chr p13 q31.3 Oncogene Tumor suppressor gene Seq+ 100532 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCF2-WDR86 ABCF2 chr7 151214879 - WDR86 chr7 151396196 - Exonic hg38 SARC TCGA-DX-A1KY-01A 4 38 Out-of-frame Intra-chr q36.1 q36.1 Seq+ 100533 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRDX6-FAM78B PRDX6 chr1 173477492 + FAM78B chr1 166070763 - Exonic hg38 SARC TCGA-DX-A1KY-01A 5 30 In-Frame Intra-chr q25.1 q24.1 Seq+ 100534 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEF2A-SV2B MEF2A chr15 99690428 + SV2B chr15 91251819 + Exonic hg38 SARC TCGA-DX-A1KY-01A 5 27 Out-of-frame Intra-chr q26.3 Transcription factor q26.1 Seq+ 100535 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR89B-DNM3 GPR89B chr1 147928578 + DNM3 chr1 172253573 + Exonic hg38 SARC TCGA-DX-A1KY-01A 3 32 In-Frame Intra-chr q21.2 q24.3 Seq+ 100536 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIEZO2-1 PIEZO2 chr18 10979535 - 1 chr14 106293807 - Exonic hg38 SARC TCGA-DX-A1KY-01A 5 22 Out-of-frame Inter-chr p11.21 100537 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIAS1-MEF2A PIAS1 chr15 68054350 + MEF2A chr15 99671323 + Exonic hg38 SARC TCGA-DX-A1KY-01A 9 2 In-Frame Intra-chr q23 Tumor suppressor gene q26.3 Transcription factor Seq+ 100538 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALT-WDR72 GALT chr9 34648456 + WDR72 chr15 53597274 - Exonic hg38 SARC TCGA-DX-A1KY-01A 2 28 In-Frame Inter-chr p13.3 q21.3 Seq+ 100539 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARMC9-PARD3B ARMC9 chr2 231240041 + PARD3B chr2 205440370 + Exonic hg38 SARC TCGA-DX-A1KY-01A 4 16 Out-of-frame Intra-chr q37.1 q33.3 Seq+ 100540 ChimerSeq TCGA FAWG TCGA_RNA-Seq DMD-LIX1L DMD chrX 31260955 - LIX1L chr1 145947782 - Exonic hg38 SARC TCGA-DX-A1KY-01A 6 6 In-Frame Inter-chr p21.1 Tumor suppressor gene q21.1 Seq+ 100541 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNT5B-CD163 WNT5B chr12 1646297 + CD163 chr12 7471397 - Exonic hg38 SARC TCGA-DX-A1KY-01A 5 9 3'UTR-3'UTR Intra-chr p13.33 p13.31 Seq+ 100542 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRS-ERLEC1 PTPRS chr19 5293141 - ERLEC1 chr2 53801397 + Exonic hg38 SARC TCGA-DX-A1KY-01A 1 24 5'UTR-CDS Inter-chr p13.3 p16.2 100543 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIN7A-GRIP1 LIN7A chr12 80889251 - GRIP1 chr12 66465422 - Exonic hg38 SARC TCGA-DX-A1KY-01A 2 19 Out-of-frame Intra-chr q21.31 q14.3 Seq+ 100544 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL23AP82-ABCC8 RPL23AP82 chr22 50785293 + ABCC8 chr11 17408517 - Exonic hg38 SARC TCGA-DX-A1KY-01A 1 23 5'UTR-CDS Inter-chr p15.1 100545 ChimerSeq TCGA FAWG TCGA_RNA-Seq APOO-ACOT9 APOO chrX 23907694 - ACOT9 chrX 23736016 - Exonic hg38 SARC TCGA-DX-A1KY-01A 2 13 Out-of-frame Intra-chr p22.11 p22.11 Seq+ 100546 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA11-DRAIC ITGA11 chr15 68339500 - DRAIC chr15 69563116 + Exonic hg38 SARC TCGA-DX-A1KY-01A 1 16 CDS-5'UTR Intra-chr q23 q23 100547 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEF2D-SYAP1 MEF2D chr1 156500486 - SYAP1 chrX 16754945 + Exonic hg38 SARC TCGA-DX-A1KY-01A 1 15 5'UTR-5'UTR Inter-chr q22 Transcription factor p22.2 100548 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL13-NUP210L METTL13 chr1 171814023 + NUP210L chr1 154012370 - Exonic hg38 SARC TCGA-DX-A1KY-01A 1 15 Out-of-frame Intra-chr q24.3 q21.3 100549 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM150C-TYW1 TMEM150C chr4 82561906 - TYW1 chr7 67083430 + Exonic hg38 SARC TCGA-DX-A1KY-01A 3 7 5'UTR-5'UTR Inter-chr q21.22 q11.21 Seq+ 100550 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABHD17A-NDUFA7 ABHD17A chr19 1879921 - NDUFA7 chr19 8316645 - Exonic hg38 SARC TCGA-DX-A1KY-01A 1 12 In-Frame Intra-chr p13.3 p13.2 100551 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFX-SYAP1 ZFX chrX 24149253 + SYAP1 chrX 16757162 + Exonic hg38 SARC TCGA-DX-A1KY-01A 1 10 5'UTR-5'UTR Intra-chr p22.11 Transcription factor p22.2 100552 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMNA-COL1A1 LMNA chr1 156138757 + COL1A1 chr17 50196367 - Exonic hg38 SARC TCGA-DX-A1KY-01A 1 9 In-Frame Inter-chr q22 q21.33 Oncogene 100553 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D15-SLC6A6 TBC1D15 chr12 71872168 + SLC6A6 chr3 14443624 + Exonic hg38 SARC TCGA-DX-A1KY-01A 1 9 5'UTR-5'UTR Inter-chr q21.1 p25.1 100554 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDK3-EIF2S3 PDK3 chrX 24465561 + EIF2S3 chrX 24055615 + Exonic hg38 SARC TCGA-DX-A1KY-01A 1 8 Out-of-frame Intra-chr p22.11 p22.11 100555 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPRD2-LCE1C RPRD2 chr1 150417725 + LCE1C chr1 152805498 - Exonic hg38 SARC TCGA-DX-A1KY-01A 1 7 CDS-5'UTR Intra-chr q21.2 q21.3 Seq+ 100556 ChimerSeq TCGA FAWG TCGA_RNA-Seq OTUD7B-POLR3GL OTUD7B chr1 149959684 - POLR3GL chr1 145977483 + Exonic hg38 SARC TCGA-DX-A1KY-01A 1 6 Out-of-frame Intra-chr q21.2 q21.1 100557 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARB-PRDM8 RARB chr3 25174575 + PRDM8 chr4 80191472 + Exonic hg38 SARC TCGA-DX-A1KY-01A 1 6 CDS-5'UTR Inter-chr p24.2 Tumor suppressor gene Transcription factor q21.21 Transcription factor Seq+ 100558 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCA4-CARM1 SMARCA4 chr19 10961174 + CARM1 chr19 10904951 + Exonic hg38 SARC TCGA-DX-A1KY-01A 1 6 5'UTR-CDS Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 100559 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP44-SHMT1 ARHGAP44 chr17 12896511 + SHMT1 chr17 18356000 - Exonic hg38 SARC TCGA-DX-A1KY-01A 1 4 5'UTR-5'UTR Intra-chr p12 p11.2 Seq+ 100560 ChimerSeq TCGA FAWG TCGA_RNA-Seq GUCY1B3-PTPRG GUCY1B3 chr4 155759860 + PTPRG chr3 61989625 + Exonic hg38 SARC TCGA-DX-A1KY-01A 1 4 Out-of-frame Inter-chr q32.1 p14.2 Seq+ 100561 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF558-OSBPL6 ZNF558 chr19 8831318 - OSBPL6 chr2 178284927 + Exonic hg38 SARC TCGA-DX-A1KY-01A 1 2 5'UTR-5'UTR Inter-chr p13.2 Transcription factor q31.2 100562 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACAN-MYOM1 ACAN chr15 88849732 + MYOM1 chr18 3168850 - Exonic hg38 SARC TCGA-DX-A1KY-01A 1000 1000 Out-of-frame Inter-chr q26.1 p11.31 100563 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D15-CPM TBC1D15 chr12 71839811 + CPM chr12 68859071 - Exonic hg38 SARC TCGA-DX-A1KZ-01A 53 56 Out-of-frame Intra-chr q21.1 q15 Seq+ 100564 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSP2-LGR5 CTDSP2 chr12 57823904 - LGR5 chr12 71553073 + Exonic hg38 SARC TCGA-DX-A1KZ-01A 26 147 Out-of-frame Intra-chr q14.1 q21.1 Seq+ 100565 ChimerSeq TCGA FAWG TCGA_RNA-Seq PALM-TISP43 PALM chr19 740483 + TISP43 chr2 130582258 + Exonic hg38 SARC TCGA-DX-A1KZ-01A 13 176 Out-of-frame Inter-chr p13.3 q21.1 Seq+ 100566 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL7-MRPL51 FBXL7 chr5 15500713 + MRPL51 chr12 6492972 - Exonic hg38 SARC TCGA-DX-A1KZ-01A 17 87 In-Frame Inter-chr p15.1 p13.31 Seq+ 100567 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM7SF3-KCNC2 TM7SF3 chr12 26990450 - KCNC2 chr12 75051317 - Exonic hg38 SARC TCGA-DX-A1KZ-01A 13 82 Out-of-frame Intra-chr p11.23 q21.1 Seq+ 100568 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRIN2B-MYF6 GRIN2B chr12 13979928 - MYF6 chr12 80707855 + Exonic hg38 SARC TCGA-DX-A1KZ-01A 12 76 5'UTR-CDS Intra-chr p13.1 q21.31 Transcription factor Seq+ 100569 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSE-PLEKHG1 DSE chr6 116399662 + PLEKHG1 chr6 150809105 + Exonic hg38 SARC TCGA-DX-A1KZ-01A 10 83 5'UTR-CDS Intra-chr q22.1 q25.1 Seq+ 100570 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL21B-PTPRR METTL21B chr12 57773128 + PTPRR chr12 70764778 - Exonic hg38 SARC TCGA-DX-A1KZ-01A 17 51 Out-of-frame Intra-chr q15 Seq+ 100571 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKH-STEAP3 ANKH chr5 14871352 - STEAP3 chr2 119245489 + Exonic hg38 SARC TCGA-DX-A1KZ-01A 15 44 Out-of-frame Inter-chr p15.2 q14.2 Seq+ 100572 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHB2-GABRR1 PLEKHB2 chr2 131105398 + GABRR1 chr6 89201265 - Exonic hg38 SARC TCGA-DX-A1KZ-01A 4 72 5'UTR-5'UTR Inter-chr q21.1 q15 Seq+ 100573 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN31-ITPR2 TSPAN31 chr12 57746756 + ITPR2 chr12 26495260 - Exonic hg38 SARC TCGA-DX-A1KZ-01A 8 54 Out-of-frame Intra-chr q14.1 p11.23 Seq+ 100574 ChimerSeq TCGA FAWG TCGA_RNA-Seq FHL1-TSPAN31 FHL1 chrX 136169980 + TSPAN31 chr12 57746589 + Exonic hg38 SARC TCGA-DX-A1KZ-01A 9 27 5'UTR-CDS Inter-chr q26.3 Tumor suppressor gene q14.1 Seq+ 100575 ChimerSeq TCGA FAWG TCGA_RNA-Seq WBP11-LGR5 WBP11 chr12 14800752 - LGR5 chr12 71504614 + Exonic hg38 SARC TCGA-DX-A1KZ-01A 5 41 Out-of-frame Intra-chr p12.3 q21.1 Seq+ 100576 ChimerSeq TCGA FAWG TCGA_RNA-Seq ISCA1-WWP1 ISCA1 chr9 86282378 - WWP1 chr8 86435452 + Exonic hg38 SARC TCGA-DX-A1KZ-01A 5 32 Out-of-frame Inter-chr q21.33 q21.3 Seq+ 100577 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPF40B-CDH4 PRPF40B chr12 49568723 + CDH4 chr20 61873728 + Exonic hg38 SARC TCGA-DX-A1KZ-01A 10 11 5'UTR-3'UTR Inter-chr q13.12 q13.33 Tumor suppressor gene Seq+ 100578 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXLNB-PDLIM1 TXLNB chr6 139288478 - PDLIM1 chr10 95238687 - Exonic hg38 SARC TCGA-DX-A1KZ-01A 4 35 Out-of-frame Inter-chr q24.1 q23.33 Seq+ 100579 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLIT3-ITPR2 SLIT3 chr5 169193479 - ITPR2 chr12 26790227 - Exonic hg38 SARC TCGA-DX-A1KZ-01A 5 22 In-Frame Inter-chr q35.1 p11.23 Seq+ 100580 ChimerSeq TCGA FAWG TCGA_RNA-Seq DMXL1-NANS DMXL1 chr5 119071656 + NANS chr9 98080816 + Exonic hg38 SARC TCGA-DX-A1KZ-01A 2 32 In-Frame Inter-chr q23.1 q22.33 Seq+ 100581 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTCH1-IPPK PTCH1 chr9 95506407 - IPPK chr9 92619565 - Exonic hg38 SARC TCGA-DX-A1KZ-01A 6 16 Out-of-frame Intra-chr q22.32 Oncogene Tumor suppressor gene q22.31 Seq+ 100582 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSRA-SPAG11B MSRA chr8 10054658 + SPAG11B chr8 7462859 - Exonic hg38 SARC TCGA-DX-A1KZ-01A 4 21 5'UTR-3'UTR Intra-chr p23.1 p23.1 Seq+ 100583 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPK-NR6A1 HNRNPK chr9 83977689 - NR6A1 chr9 124554570 - Exonic hg38 SARC TCGA-DX-A1KZ-01A 5 16 Out-of-frame Intra-chr q21.32 q33.3 Transcription factor Seq+ 100584 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEAD4-MAP3K12 TEAD4 chr12 2960040 + MAP3K12 chr12 53487145 - Exonic hg38 SARC TCGA-DX-A1KZ-01A 3 24 5'UTR-CDS Intra-chr p13.33 Transcription factor q13.13 Seq+ 100585 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED21-PIP5K1C MED21 chr12 27022621 + PIP5K1C chr19 3662001 - Exonic hg38 SARC TCGA-DX-A1KZ-01A 4 19 In-Frame Inter-chr p11.23 p13.3 Seq+ 100586 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3C2G-CTDSP2 PIK3C2G chr12 18282759 + CTDSP2 chr12 57824319 - Exonic hg38 SARC TCGA-DX-A1KZ-01A 5 10 In-Frame Intra-chr p12.3 q14.1 Seq+ 100587 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCSTAMP-TSPAN31 DCSTAMP chr8 104340440 + TSPAN31 chr12 57746589 + Exonic hg38 SARC TCGA-DX-A1KZ-01A 2 21 5'UTR-CDS Inter-chr q22.3 q14.1 Seq+ 100588 ChimerSeq TCGA FAWG TCGA_RNA-Seq TULP3-CCSER2 TULP3 chr12 2934561 + CCSER2 chr10 84417771 + Exonic hg38 SARC TCGA-DX-A1KZ-01A 3 17 In-Frame Inter-chr p13.33 q23.1 Seq+ 100589 ChimerSeq TCGA FAWG TCGA_RNA-Seq FKBP4-GAPDH FKBP4 chr12 2797871 + GAPDH chr12 6534810 + Exonic hg38 SARC TCGA-DX-A1KZ-01A 1 24 CDS-5'UTR Intra-chr p13.33 p13.31 100590 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH4-DPPA3 CDH4 chr20 61873900 + DPPA3 chr12 7715183 + Exonic hg38 SARC TCGA-DX-A1KZ-01A 2 19 3'UTR-CDS Inter-chr q13.33 Tumor suppressor gene p13.31 Seq+ 100591 ChimerSeq TCGA FAWG TCGA_RNA-Seq FHL1-DCSTAMP FHL1 chrX 136169980 + DCSTAMP chr8 104339806 + Exonic hg38 SARC TCGA-DX-A1KZ-01A 2 17 5'UTR-5'UTR Inter-chr q26.3 Tumor suppressor gene q22.3 Seq+ 100592 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNMB4-GDF3 KCNMB4 chr12 70400336 + GDF3 chr12 7690704 - Exonic hg38 SARC TCGA-DX-A1KZ-01A 1 20 Out-of-frame Intra-chr q15 p13.31 Seq+ 100593 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD33B-ANKH ANKRD33B chr5 10564833 + ANKH chr5 14769191 - Exonic hg38 SARC TCGA-DX-A1KZ-01A 3 10 In-Frame Intra-chr p15.2 p15.2 Seq+ 100594 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCT5-SVEP1 CCT5 chr5 10258535 + SVEP1 chr9 110436504 - Exonic hg38 SARC TCGA-DX-A1KZ-01A 2 14 Out-of-frame Inter-chr p15.2 q31.3 Seq+ 100595 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP54-ADK USP54 chr10 73625937 - ADK chr10 74525256 + Exonic hg38 SARC TCGA-DX-A1KZ-01A 4 6 5'UTR-5'UTR Intra-chr q22.2 q22.2 Seq+ 100596 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELF2-GABRR1 CELF2 chr10 11018163 + GABRR1 chr6 89203485 - Exonic hg38 SARC TCGA-DX-A1KZ-01A 3 9 In-Frame Inter-chr p14 q15 Seq+ 100597 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPIL4-DCTN2 PPIL4 chr6 149521060 - DCTN2 chr12 57535845 - Exonic hg38 SARC TCGA-DX-A1KZ-01A 2 12 Out-of-frame Inter-chr q25.1 q13.3 Seq+ 100598 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT12-ROR2 GALNT12 chr9 98808069 + ROR2 chr9 91563329 - Exonic hg38 SARC TCGA-DX-A1KZ-01A 3 7 CDS-3'UTR Intra-chr q22.33 q22.31 TK:Ror Tumor suppressor gene Seq+ 100599 ChimerSeq TCGA FAWG TCGA_RNA-Seq KATNA1-RALYL KATNA1 chr6 149648469 - RALYL chr8 84529299 + Exonic hg38 SARC TCGA-DX-A1KZ-01A 2 6 5'UTR-5'UTR Inter-chr q25.1 q21.2 Seq+ 100600 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIP5K1C-PPM1H PIP5K1C chr19 3700297 - PPM1H chr12 62832279 - Exonic hg38 SARC TCGA-DX-A1KZ-01A 1 10 Out-of-frame Inter-chr p13.3 q14.2 Seq+ 100601 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSFM-DOCK2 TSFM chr12 57793073 + DOCK2 chr5 169747396 + Exonic hg38 SARC TCGA-DX-A1KZ-01A 1 10 Out-of-frame Inter-chr q14.1 q35.1 Seq+ 100602 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCY2-HSDL2 ADCY2 chr5 7773101 + HSDL2 chr9 112416841 + Exonic hg38 SARC TCGA-DX-A1KZ-01A 1 9 In-Frame Inter-chr p15.31 q32 100603 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM208B-OAZ1 FAM208B chr10 5685175 + OAZ1 chr19 2271782 + Exonic hg38 SARC TCGA-DX-A1KZ-01A 1 9 Out-of-frame Inter-chr p15.1 p13.3 100604 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L5-FZR1 EPB41L5 chr2 120042110 + FZR1 chr19 3522956 + Exonic hg38 SARC TCGA-DX-A1KZ-01A 1 8 5'UTR-5'UTR Inter-chr q14.2 p13.3 Oncogene Tumor suppressor gene Seq+ 100605 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDLIM1-MINDY3 PDLIM1 chr10 95247215 - MINDY3 chr10 15796172 - Exonic hg38 SARC TCGA-DX-A1KZ-01A 1 8 Out-of-frame Intra-chr q23.33 p13 100606 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN3-SEMA5A PTPN3 chr9 109498219 - SEMA5A chr5 9437852 - Exonic hg38 SARC TCGA-DX-A1KZ-01A 2 3 5'UTR-5'UTR Inter-chr q31.3 p15.31 100607 ChimerSeq TCGA FAWG TCGA_RNA-Seq WBP11-SYT10 WBP11 chr12 14800752 - SYT10 chr12 33426495 - Exonic hg38 SARC TCGA-DX-A1KZ-01A 1 6 Out-of-frame Intra-chr p12.3 p11.1 100608 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSP2-UST CTDSP2 chr12 57823904 - UST chr6 149073833 + Exonic hg38 SARC TCGA-DX-A1KZ-01A 1 5 Out-of-frame Inter-chr q14.1 q25.1 100609 ChimerSeq TCGA FAWG TCGA_RNA-Seq PI4K2B-INSR PI4K2B chr4 25234431 + INSR chr19 7267896 - Exonic hg38 SARC TCGA-DX-A1KZ-01A 1 3 In-Frame Inter-chr p15.2 p13.2 TK:InsR Seq+ 100610 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF169-SEMA5A ZNF169 chr9 94293069 + SEMA5A chr5 9318417 - Exonic hg38 SARC TCGA-DX-A1KZ-01A 1 3 Out-of-frame Inter-chr q22.32 Transcription factor p15.31 100611 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSAT1-DAB2IP PSAT1 chr9 78304940 + DAB2IP chr9 121678678 + Exonic hg38 SARC TCGA-DX-A1KZ-01A 1 2 In-Frame Intra-chr q21.2 q33.2 Tumor suppressor gene 100612 ChimerSeq TCGA FAWG TCGA_RNA-Seq TULP3-UGCG TULP3 chr12 2934561 + UGCG chr9 111914605 + Exonic hg38 SARC TCGA-DX-A1KZ-01A 1 2 Out-of-frame Inter-chr p13.33 q31.3 Seq+ 100613 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRIN2B-MYF5 GRIN2B chr12 13979928 - MYF5 chr12 80717040 + Exonic hg38 SARC TCGA-DX-A1KZ-01A 1000 1000 5'UTR-5'UTR Intra-chr p13.1 q21.31 Transcription factor 100614 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC16A7-NUP107 SLC16A7 chr12 59596236 + NUP107 chr12 68733452 + Exonic hg38 SARC TCGA-DX-A1L0-01A 63 359 5'UTR-CDS Intra-chr q14.1 q15 Seq+ 100615 ChimerSeq TCGA FAWG TCGA_RNA-Seq NHSL1-CDIP1 NHSL1 chr6 138545623 - CDIP1 chr16 4514664 - Exonic hg38 SARC TCGA-DX-A1L0-01A 45 209 5'UTR-5'UTR Inter-chr q24.1 p13.3 Seq+ 100616 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLFN5-TBC1D15 SLFN5 chr17 35243143 + TBC1D15 chr12 71913826 + Exonic hg38 SARC TCGA-DX-A1L0-01A 42 142 5'UTR-5'UTR Inter-chr q12 q21.1 Seq+ 100617 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMBOX1-BNIP3L HMBOX1 chr8 29018913 + BNIP3L chr8 26505307 + Exonic hg38 SARC TCGA-DX-A1L0-01A 25 137 CDS-3'UTR Intra-chr p21.1 Transcription factor p21.2 Tumor suppressor gene Seq+ 100618 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFC3H1-MON2 ZFC3H1 chr12 71656885 - MON2 chr12 62578445 + Exonic hg38 SARC TCGA-DX-A1L0-01A 23 113 Out-of-frame Intra-chr q21.1 q14.1 Seq+ 100619 ChimerSeq TCGA FAWG TCGA_RNA-Seq LGR5-TSPAN8 LGR5 chr12 71440292 + TSPAN8 chr12 71282819 - Exonic hg38 SARC TCGA-DX-A1L0-01A 6 63 5'UTR-5'UTR Intra-chr q21.1 q21.1 Seq+ 100620 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1orf21-INTS7 C1orf21 chr1 184598461 + INTS7 chr1 211952701 - Exonic hg38 SARC TCGA-DX-A1L0-01A 11 42 Out-of-frame Intra-chr q25.3 q32.3 Seq+ 100621 ChimerSeq TCGA FAWG TCGA_RNA-Seq MON2-TBC1D15 MON2 chr12 62566450 + TBC1D15 chr12 71872070 + Exonic hg38 SARC TCGA-DX-A1L0-01A 5 44 In-Frame Intra-chr q14.1 q21.1 Seq+ 100622 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPM-MON2 CPM chr12 68932678 - MON2 chr12 62532438 + Exonic hg38 SARC TCGA-DX-A1L0-01A 5 40 Out-of-frame Intra-chr q15 q14.1 Seq+ 100623 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARS-MSRB3 MARS chr12 57504299 + MSRB3 chr12 65488004 + Exonic hg38 SARC TCGA-DX-A1L0-01A 5 40 CDS-3'UTR Intra-chr q13.3 q14.3 Seq+ 100624 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP9B-LUC7L ATP9B chr18 79193263 + LUC7L chr16 208188 - Exonic hg38 SARC TCGA-DX-A1L0-01A 5 36 In-Frame Inter-chr p13.3 Seq+ 100625 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB21-FRS2 RAB21 chr12 71774022 + FRS2 chr12 69562180 + Exonic hg38 SARC TCGA-DX-A1L0-01A 4 30 CDS-5'UTR Intra-chr q21.1 q15 Seq+ 100626 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIAPH2-RAB3IP DIAPH2 chrX 96685190 + RAB3IP chr12 69755384 + Exonic hg38 SARC TCGA-DX-A1L0-01A 4 25 Out-of-frame Inter-chr q21.33 q15 Seq+ 100627 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGA2-ARFGAP2 HMGA2 chr12 65825381 + ARFGAP2 chr11 47172333 - Exonic hg38 SARC TCGA-DX-A1L0-01A 3 28 Out-of-frame Inter-chr q14.3 Transcription factor p11.2 Seq+ 100628 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKH-DNAH5 ANKH chr5 14871352 - DNAH5 chr5 13737495 - Exonic hg38 SARC TCGA-DX-A1L0-01A 5 19 CDS-3'UTR Intra-chr p15.2 p15.2 Seq+ 100629 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP9B-ATRX ATP9B chr18 79096649 + ATRX chrX 77654200 - Exonic hg38 SARC TCGA-DX-A1L0-01A 4 20 In-Frame Inter-chr q21.1 Oncogene Seq+ 100630 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIC-IL4I1 NFIC chr19 3382243 + IL4I1 chr19 49891107 - Exonic hg38 SARC TCGA-DX-A1L0-01A 3 24 Out-of-frame Intra-chr p13.3 Transcription factor q13.33 Seq+ 100631 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGA2-RHBG HMGA2 chr12 65828087 + RHBG chr1 156371185 + Exonic hg38 SARC TCGA-DX-A1L0-01A 6 0 In-Frame Inter-chr q14.3 Transcription factor q22 Seq+ 100632 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPR1-TNR XPR1 chr1 180632270 + TNR chr1 175528369 - Exonic hg38 SARC TCGA-DX-A1L0-01A 3 9 5'UTR-5'UTR Intra-chr q25.3 q25.1 Seq+ 100633 ChimerSeq TCGA FAWG TCGA_RNA-Seq EML1-BASP1 EML1 chr14 99851035 + BASP1 chr5 17275208 + Exonic hg38 SARC TCGA-DX-A1L0-01A 2 11 CDS-5'UTR Inter-chr q32.2 p15.1 Tumor suppressor gene Seq+ 100634 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBFA-MRPS35 RBFA chr18 80036710 + MRPS35 chr12 27737539 + Exonic hg38 SARC TCGA-DX-A1L0-01A 4 2 In-Frame Inter-chr q23 p11.22 Seq+ 100635 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC9A8-B4GALT5 SLC9A8 chr20 49815189 + B4GALT5 chr20 49656702 - Exonic hg38 SARC TCGA-DX-A1L0-01A 1 13 In-Frame Intra-chr q13.13 q13.13 Seq+ 100636 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANK1-DNAH5 KANK1 chr9 504754 + DNAH5 chr5 13931244 - Exonic hg38 SARC TCGA-DX-A1L0-01A 2 3 5'UTR-3'UTR Inter-chr p24.3 Tumor suppressor gene p15.2 Seq+ 100637 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIAM2-PPIL4 TIAM2 chr6 155165409 + PPIL4 chr6 149505704 - Exonic hg38 SARC TCGA-DX-A1L0-01A 2 3 In-Frame Intra-chr q25.2 q25.1 Seq+ 100638 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS12-COL3A1 RPS12 chr6 132816563 + COL3A1 chr2 188994541 + Exonic hg38 SARC TCGA-DX-A1L0-01A 1 6 In-Frame Inter-chr q23.2 q32.2 100639 ChimerSeq TCGA FAWG TCGA_RNA-Seq RMND1-TIAM2 RMND1 chr6 151421245 - TIAM2 chr6 155127490 + Exonic hg38 SARC TCGA-DX-A1L0-01A 1 5 CDS-5'UTR Intra-chr q25.1 q25.2 Seq+ 100640 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL21B-MARS METTL21B chr12 57773128 + MARS chr12 57487937 + Exonic hg38 SARC TCGA-DX-A1L0-01A 1 4 Out-of-frame Intra-chr q13.3 100641 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP43-SHPRH NUP43 chr6 149738643 - SHPRH chr6 145894977 - Exonic hg38 SARC TCGA-DX-A1L0-01A 1 2 Out-of-frame Intra-chr q25.1 q24.3 Tumor suppressor gene Seq+ 100642 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D15-SLC16A7 TBC1D15 chr12 71873003 + SLC16A7 chr12 59771219 + Exonic hg38 SARC TCGA-DX-A1L0-01A 1000 1000 Out-of-frame Intra-chr q21.1 q14.1 Seq+ 100643 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGF2-FREM3 FGF2 chr4 122827352 + FREM3 chr4 143627760 - Exonic hg38 SARC TCGA-DX-A1L1-01A 8 55 In-Frame Intra-chr q28.1 q31.21 Seq+ 100644 ChimerSeq TCGA FAWG TCGA_RNA-Seq AUTS2-SEMA3A AUTS2 chr7 70698620 + SEMA3A chr7 84060558 - Exonic hg38 SARC TCGA-DX-A1L1-01A 3 21 Out-of-frame Intra-chr q11.22 q21.11 Seq+ 100645 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIMK1-TYW1 LIMK1 chr7 74111998 + TYW1 chr7 67024900 + Exonic hg38 SARC TCGA-DX-A1L1-01A 6 7 In-Frame Intra-chr q11.23 TKL:LISK q11.21 100646 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSN1-MROH8 DSN1 chr20 36754763 - MROH8 chr20 37141314 - Exonic hg38 SARC TCGA-DX-A1L1-01A 2 8 Out-of-frame Intra-chr q11.23 q11.23 100647 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATAD2B-GRM8 GATAD2B chr1 153922733 - GRM8 chr7 126446372 - Exonic hg38 SARC TCGA-DX-A1L2-01A 86 330 5'UTR-CDS Inter-chr Transcription factor q31.33 Oncogene Seq+ 100648 ChimerSeq TCGA FAWG TCGA_RNA-Seq LINC-C1orf61 LINC chr7 131052425 - C1orf61 chr1 156429548 - Exonic hg38 SARC TCGA-DX-A1L2-01A 28 407 Out-of-frame Inter-chr q22 100649 ChimerSeq TCGA FAWG TCGA_RNA-Seq TGFBR2-XPC TGFBR2 chr3 30606977 + XPC chr3 14173062 - Exonic hg38 SARC TCGA-DX-A1L2-01A 38 102 In-Frame Intra-chr p24.1 Oncogene Tumor suppressor gene p25.1 Oncogene Seq+ 100650 ChimerSeq TCGA FAWG TCGA_RNA-Seq LINC-FMO3 LINC chr7 131052425 - FMO3 chr1 171092653 + Exonic hg38 SARC TCGA-DX-A1L2-01A 12 148 Out-of-frame Inter-chr q24.3 100651 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF11-CD48 ARHGEF11 chr1 157044299 - CD48 chr1 160685189 - Exonic hg38 SARC TCGA-DX-A1L2-01A 14 72 Out-of-frame Intra-chr q23.1 q23.3 Seq+ 100652 ChimerSeq TCGA FAWG TCGA_RNA-Seq INPP4A-EEF1E1 INPP4A chr2 98577143 + EEF1E1 chr6 8080030 - Exonic hg38 SARC TCGA-DX-A1L2-01A 9 27 Out-of-frame Inter-chr q11.2 p24.3 Tumor suppressor gene Seq+ 100653 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC38A10-TMEM207 SLC38A10 chr17 81270918 - TMEM207 chr3 190429731 - Exonic hg38 SARC TCGA-DX-A1L2-01A 3 31 Out-of-frame Inter-chr q25.3 q28 Seq+ 100654 ChimerSeq TCGA FAWG TCGA_RNA-Seq POU2F1-ATP6V1F POU2F1 chr1 167220958 + ATP6V1F chr7 128865377 + Exonic hg38 SARC TCGA-DX-A1L2-01A 1 31 Out-of-frame Inter-chr q24.2 Transcription factor q32.1 100655 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEX11B-PDZK1 PEX11B chr1 145918633 - PDZK1 chr1 145682636 - Exonic hg38 SARC TCGA-DX-A1L2-01A 4 16 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 100656 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTD-BCAS3 BTD chr3 15644931 + BCAS3 chr17 61368327 + Exonic hg38 SARC TCGA-DX-A1L2-01A 3 15 In-Frame Inter-chr p25.1 q23.2 Seq+ 100657 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKLN1-DNM3 MKLN1 chr7 131327997 + DNM3 chr1 171987656 + Exonic hg38 SARC TCGA-DX-A1L2-01A 2 16 Out-of-frame Inter-chr q32.3 q24.3 Seq+ 100658 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBX19-PCP4L1 TBX19 chr1 168308877 + PCP4L1 chr1 161283668 + Exonic hg38 SARC TCGA-DX-A1L2-01A 3 11 Out-of-frame Intra-chr q24.2 Transcription factor q23.3 Seq+ 100659 ChimerSeq TCGA FAWG TCGA_RNA-Seq HP1BP3-ZMYM4 HP1BP3 chr1 20776597 - ZMYM4 chr1 35358925 + Exonic hg38 SARC TCGA-DX-A1L2-01A 2 13 Out-of-frame Intra-chr p36.12 p34.3 Seq+ 100660 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPCAT1-MED13 LPCAT1 chr5 1501461 - MED13 chr17 61947017 - Exonic hg38 SARC TCGA-DX-A1L2-01A 2 13 3'UTR-CDS Inter-chr q23.2 Seq+ 100661 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK1D-GSDMA CSNK1D chr17 82252434 - GSDMA chr17 39965683 + Exonic hg38 SARC TCGA-DX-A1L2-01A 1 11 CDS-5'UTR Intra-chr q25.3 q21.1 Seq+ 100662 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBMS3-LPCAT1 RBMS3 chr3 29281756 + LPCAT1 chr5 1501603 - Exonic hg38 SARC TCGA-DX-A1L2-01A 1 9 CDS-3'UTR Inter-chr p24.1 Tumor suppressor gene 100663 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP15-STAT6 USP15 chr12 62260503 + STAT6 chr12 57108299 - Exonic hg38 SARC TCGA-DX-A1L2-01A 1 6 5'UTR-5'UTR Intra-chr q14.1 q13.3 Transcription factor 100664 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREB3L4-FCER1A CREB3L4 chr1 153969455 + FCER1A chr1 159302854 + Exonic hg38 SARC TCGA-DX-A1L2-01A 1 4 Out-of-frame Intra-chr q21.3 Transcription factor q23.2 Seq+ 100665 ChimerSeq TCGA FAWG TCGA_RNA-Seq UCK2-TBX19 UCK2 chr1 165827932 + TBX19 chr1 168308742 + Exonic hg38 SARC TCGA-DX-A1L2-01A 1 4 Out-of-frame Intra-chr q24.1 q24.2 Transcription factor Seq+ 100666 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB25-MB21D2 ZBTB25 chr14 64487114 - MB21D2 chr3 192799650 - Exonic hg38 SARC TCGA-DX-A1L2-01A 1 4 In-Frame Inter-chr q23.3 Transcription factor q29 100667 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP8L-EPS15L1 AKAP8L chr19 15418911 - EPS15L1 chr19 16421476 - Exonic hg38 SARC TCGA-DX-A1L2-01A 1 1 Out-of-frame Intra-chr p13.12 Transcription factor p13.11 100668 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRTC2-SH2D1B CRTC2 chr1 153952876 - SH2D1B chr1 162412138 - Exonic hg38 SARC TCGA-DX-A1L2-01A 1000 1000 Out-of-frame Intra-chr q21.3 q23.3 100669 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-ATXN1 FRS2 chr12 69470530 + ATXN1 chr6 16522688 - Exonic hg38 SARC TCGA-DX-A1L3-01A 14 230 5'UTR-5'UTR Inter-chr q15 p22.3 Seq+ 100670 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA5-CPM PLEKHA5 chr12 19322667 + CPM chr12 68957678 - Exonic hg38 SARC TCGA-DX-A1L3-01A 46 92 CDS-5'UTR Intra-chr p12.3 q15 Seq+ 100671 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIO-TERT TRIO chr5 14420021 + TERT chr5 1282624 - Exonic hg38 SARC TCGA-DX-A1L3-01A 31 134 In-Frame Intra-chr p15.2 p15.33 Oncogene Seq+ 100672 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN1-DNM3 ATXN1 chr6 16485972 - DNM3 chr1 172379018 + Exonic hg38 SARC TCGA-DX-A1L3-01A 24 107 5'UTR-5'UTR Inter-chr p22.3 q24.3 Seq+ 100673 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN1-SLC24A1 ATXN1 chr6 16485972 - SLC24A1 chr15 65618880 + Exonic hg38 SARC TCGA-DX-A1L3-01A 14 113 5'UTR-5'UTR Inter-chr p22.3 q22.31 Seq+ 100674 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT2-CRADD CNOT2 chr12 70243480 + CRADD chr12 93849970 + Exonic hg38 SARC TCGA-DX-A1L3-01A 25 31 5'UTR-CDS Intra-chr q15 q22 Seq+ 100675 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUCO-CDH18 SUCO chr1 172533497 + CDH18 chr5 19981178 - Exonic hg38 SARC TCGA-DX-A1L3-01A 9 87 5'UTR-5'UTR Inter-chr q24.3 p14.3 Seq+ 100676 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDM2-FMO6P MDM2 chr12 68835984 + FMO6P chr1 171143181 + Exonic hg38 SARC TCGA-DX-A1L3-01A 15 56 CDS-5'UTR Inter-chr q15 Oncogene q24.3 Seq+ 100677 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2K5-MYRFL MAP2K5 chr15 67600749 + MYRFL chr12 69879028 + Exonic hg38 SARC TCGA-DX-A1L3-01A 10 66 In-Frame Inter-chr q23 STE:STE7 q15 Transcription factor Seq+ 100678 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC17-RAB3IP ZDHHC17 chr12 76764329 + RAB3IP chr12 69755384 + Exonic hg38 SARC TCGA-DX-A1L3-01A 6 77 Out-of-frame Intra-chr q21.2 q15 Seq+ 100679 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM78B-RAB3IP FAM78B chr1 166165986 - RAB3IP chr12 69812964 + Exonic hg38 SARC TCGA-DX-A1L3-01A 6 69 In-Frame Inter-chr q24.1 q15 Seq+ 100680 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUCO-MYRFL SUCO chr1 172533497 + MYRFL chr12 69855280 + Exonic hg38 SARC TCGA-DX-A1L3-01A 8 39 Out-of-frame Inter-chr q24.3 q15 Transcription factor Seq+ 100681 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL7-CCT5 FBXL7 chr5 15616072 + CCT5 chr5 10254145 + Exonic hg38 SARC TCGA-DX-A1L3-01A 6 40 Out-of-frame Intra-chr p15.1 p15.2 Seq+ 100682 ChimerSeq TCGA FAWG TCGA_RNA-Seq IQCH-CTNND2 IQCH chr15 67261394 + CTNND2 chr5 11199661 - Exonic hg38 SARC TCGA-DX-A1L3-01A 5 15 In-Frame Inter-chr q23 p15.2 Seq+ 100683 ChimerSeq TCGA FAWG TCGA_RNA-Seq UHRF1-PEX11G UHRF1 chr19 4947211 + PEX11G chr19 7478376 - Exonic hg38 SARC TCGA-DX-A1L3-01A 2 25 In-Frame Intra-chr p13.3 p13.2 Seq+ 100684 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D30-SYT1 TBC1D30 chr12 64786045 + SYT1 chr12 78977799 + Exonic hg38 SARC TCGA-DX-A1L3-01A 1 26 5'UTR-5'UTR Intra-chr q14.3 q21.2 Seq+ 100685 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIFAP3-C1orf112 KIFAP3 chr1 170016462 - C1orf112 chr1 169836927 + Exonic hg38 SARC TCGA-DX-A1L3-01A 2 21 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 100686 ChimerSeq TCGA FAWG TCGA_RNA-Seq JARID2-DNM3 JARID2 chr6 15246584 + DNM3 chr1 171921748 + Exonic hg38 SARC TCGA-DX-A1L3-01A 1 19 Out-of-frame Inter-chr p22.3 q24.3 Seq+ 100687 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC35E3-MYRFL SLC35E3 chr12 68752190 + MYRFL chr12 69952113 + Exonic hg38 SARC TCGA-DX-A1L3-01A 2 13 Out-of-frame Intra-chr q15 q15 Transcription factor Seq+ 100688 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM3-UHRF1 DNM3 chr1 171921821 + UHRF1 chr19 4941528 + Exonic hg38 SARC TCGA-DX-A1L3-01A 1 11 Out-of-frame Inter-chr q24.3 p13.3 Seq+ 100689 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBX1-ELK3 PBX1 chr1 164821626 + ELK3 chr12 96223565 + Exonic hg38 SARC TCGA-DX-A1L3-01A 1 11 CDS-5'UTR Inter-chr q23.3 Oncogene Transcription factor q23.1 Transcription factor 100690 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDZD2-KIFAP3 PDZD2 chr5 31855168 + KIFAP3 chr1 169961235 - Exonic hg38 SARC TCGA-DX-A1L3-01A 1 9 Out-of-frame Inter-chr p13.3 q24.2 100691 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMDHD1-ACSS3 AMDHD1 chr12 95956962 + ACSS3 chr12 81174788 + Exonic hg38 SARC TCGA-DX-A1L3-01A 1 8 Out-of-frame Intra-chr q23.1 q21.31 Seq+ 100692 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPZL1-SELP MPZL1 chr1 167765749 + SELP chr1 169617414 - Exonic hg38 SARC TCGA-DX-A1L3-01A 2 3 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 100693 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAS2L3-OS9 GAS2L3 chr12 100601753 + OS9 chr12 57715760 + Exonic hg38 SARC TCGA-DX-A1L4-01A 67 159 In-Frame Intra-chr q23.1 q13.3 Seq+ 100694 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-THEMIS FRS2 chr12 69470530 + THEMIS chr6 127719823 - Exonic hg38 SARC TCGA-DX-A1L4-01A 29 166 5'UTR-5'UTR Inter-chr q15 Seq+ 100695 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL8-FAM186A OSBPL8 chr12 76559397 - FAM186A chr12 50334103 - Exonic hg38 SARC TCGA-DX-A1L4-01A 20 58 5'UTR-CDS Intra-chr q21.2 q13.12 Seq+ 100696 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM2-SASH1 R3HDM2 chr12 57395749 - SASH1 chr6 148546015 + Exonic hg38 SARC TCGA-DX-A1L4-01A 22 40 5'UTR-CDS Inter-chr q13.3 q24.3 Tumor suppressor gene 100697 ChimerSeq TCGA FAWG TCGA_RNA-Seq FYN-TUBA1C FYN chr6 111780566 - TUBA1C chr12 49272253 + Exonic hg38 SARC TCGA-DX-A1L4-01A 18 44 5'UTR-CDS Inter-chr q21 TK:Src q13.12 100698 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO4-NTS ANO4 chr12 100987670 + NTS chr12 85878345 + Exonic hg38 SARC TCGA-DX-A1L4-01A 12 53 5'UTR-CDS Intra-chr q23.1 q21.31 Seq+ 100699 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBK1-CDK19 TBK1 chr12 64485513 + CDK19 chr6 110614666 - Exonic hg38 SARC TCGA-DX-A1L4-01A 14 35 In-Frame Inter-chr q14.2 Other:IKK q21 Seq+ 100700 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBA1C-NT5DC3 TUBA1C chr12 49265184 + NT5DC3 chr12 103771329 - Exonic hg38 SARC TCGA-DX-A1L4-01A 7 55 CDS-3'UTR Intra-chr q13.12 q23.3 100701 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAV3-ANO4 NAV3 chr12 77968702 + ANO4 chr12 100852368 + Exonic hg38 SARC TCGA-DX-A1L4-01A 4 57 CDS-5'UTR Intra-chr q21.2 q23.1 100702 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAM-EPYC STAM chr10 17644379 + EPYC chr12 90978262 - Exonic hg38 SARC TCGA-DX-A1L4-01A 12 25 In-Frame Inter-chr p12.33 q21.33 Seq+ 100703 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTHFD1L-IFT81 MTHFD1L chr6 150877826 + IFT81 chr12 110162919 + Exonic hg38 SARC TCGA-DX-A1L4-01A 6 32 In-Frame Inter-chr q25.1 q24.11 Seq+ 100704 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBA1C-TMEM116 TUBA1C chr12 49265184 + TMEM116 chr12 111943369 - Exonic hg38 SARC TCGA-DX-A1L4-01A 5 36 In-Frame Intra-chr q13.12 q24.13 Seq+ 100705 ChimerSeq TCGA FAWG TCGA_RNA-Seq SASH1-STAB2 SASH1 chr6 148546146 + STAB2 chr12 103759133 + Exonic hg38 SARC TCGA-DX-A1L4-01A 7 20 In-Frame Inter-chr q24.3 Tumor suppressor gene q23.3 Seq+ 100706 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK19-CPM CDK19 chr6 110746126 - CPM chr12 68871956 - Exonic hg38 SARC TCGA-DX-A1L4-01A 6 19 In-Frame Inter-chr q21 q15 100707 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC38A4-TSFM SLC38A4 chr12 46779611 - TSFM chr12 57786163 + Exonic hg38 SARC TCGA-DX-A1L4-01A 2 33 In-Frame Intra-chr q13.11 q14.1 100708 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBLN1-CDK19 FBLN1 chr22 45518787 + CDK19 chr6 110773937 - Exonic hg38 SARC TCGA-DX-A1L4-01A 5 13 CDS-5'UTR Inter-chr q13.31 Tumor suppressor gene q21 100709 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSU1-FANCI RSU1 chr10 16816973 - FANCI chr15 89273377 + Exonic hg38 SARC TCGA-DX-A1L4-01A 4 17 Out-of-frame Inter-chr p13 q26.1 Seq+ 100710 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM117-PRIM1 TMEM117 chr12 43844928 + PRIM1 chr12 56751195 - Exonic hg38 SARC TCGA-DX-A1L4-01A 4 17 In-Frame Intra-chr q12 q13.3 Seq+ 100711 ChimerSeq TCGA FAWG TCGA_RNA-Seq KITLG-ST8SIA6 KITLG chr12 88580264 - ST8SIA6 chr10 17331552 - Exonic hg38 SARC TCGA-DX-A1L4-01A 3 13 Out-of-frame Inter-chr q21.32 p12.33 Seq+ 100712 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-STAB2 FRS2 chr12 69470530 + STAB2 chr12 103650496 + Exonic hg38 SARC TCGA-DX-A1L4-01A 1 16 5'UTR-CDS Intra-chr q15 q23.3 100713 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMTC2-HERC1 TMTC2 chr12 82687669 + HERC1 chr15 63664594 - Exonic hg38 SARC TCGA-DX-A1L4-01A 3 8 In-Frame Inter-chr q21.31 q22.31 Seq+ 100714 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC17-MALRD1 ZDHHC17 chr12 76764329 + MALRD1 chr10 19257684 + Exonic hg38 SARC TCGA-DX-A1L4-01A 3 7 In-Frame Inter-chr q21.2 p12.31 100715 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM186A-IRAK4 FAM186A chr12 50330573 - IRAK4 chr12 43771220 + Exonic hg38 SARC TCGA-DX-A1L4-01A 3 5 In-Frame Intra-chr q13.12 q12 TKL:IRAK 100716 ChimerSeq TCGA FAWG TCGA_RNA-Seq REV3L-TMEM117 REV3L chr6 111322569 - TMEM117 chr12 43844624 + Exonic hg38 SARC TCGA-DX-A1L4-01A 1 9 CDS-5'UTR Inter-chr q21 q12 Seq+ 100717 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC17-METTL25 ZDHHC17 chr12 76822531 + METTL25 chr12 82476644 + Exonic hg38 SARC TCGA-DX-A1L4-01A 1 9 In-Frame Intra-chr q21.2 q21.31 100718 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPF2-USP3 RPF2 chr6 110997264 + USP3 chr15 63532647 + Exonic hg38 SARC TCGA-DX-A1L4-01A 1 4 In-Frame Inter-chr q21 q22.31 100719 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCHP-GLIPR1L1 TCHP chr12 109904793 + GLIPR1L1 chr12 75369960 + Exonic hg38 SARC TCGA-DX-A1L4-01A 1 4 Out-of-frame Intra-chr q24.11 Tumor suppressor gene q21.2 100720 ChimerSeq TCGA FAWG TCGA_RNA-Seq FYN-HSD17B6 FYN chr6 111780566 - HSD17B6 chr12 56763198 + Exonic hg38 SARC TCGA-DX-A1L4-01A 1 3 5'UTR-5'UTR Inter-chr q21 TK:Src q13.3 100721 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRIP1-REV3L GRIP1 chr12 66353539 - REV3L chr6 111483665 - Exonic hg38 SARC TCGA-DX-A1L4-01A 1000 1000 Out-of-frame Inter-chr q14.3 q21 100722 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD4-CPM CHD4 chr12 6591466 - CPM chr12 68871956 - Exonic hg38 SARC TCGA-DX-A23R-01A 179 582 Out-of-frame Intra-chr p13.31 q15 Seq+ 100723 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNA1C-EEA1 CACNA1C chr12 2120430 + EEA1 chr12 92826285 - Exonic hg38 SARC TCGA-DX-A23R-01A 15 93 3'UTR-CDS Intra-chr p13.33 q22 Transcription factor Seq+ 100724 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHG7-MRPL42 PLEKHG7 chr12 92741592 + MRPL42 chr12 93501176 + Exonic hg38 SARC TCGA-DX-A23R-01A 17 73 Out-of-frame Intra-chr q22 q22 Seq+ 100725 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHKB-SCN8A PHKB chr16 47696488 + SCN8A chr12 51684174 + Exonic hg38 SARC TCGA-DX-A23R-01A 14 82 In-Frame Inter-chr q12.1 q13.13 Seq+ 100726 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-PLEKHG7 FRS2 chr12 69470530 + PLEKHG7 chr12 92740853 + Exonic hg38 SARC TCGA-DX-A23R-01A 11 79 5'UTR-CDS Intra-chr q15 q22 Seq+ 100727 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCTN2-NAV3 DCTN2 chr12 57546028 - NAV3 chr12 78128706 + Exonic hg38 SARC TCGA-DX-A23R-01A 8 87 Out-of-frame Intra-chr q13.3 q21.2 100728 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS7-PEAK1 ADAMTS7 chr15 78788231 - PEAK1 chr15 77115319 - Exonic hg38 SARC TCGA-DX-A23R-01A 13 25 Out-of-frame Intra-chr q25.1 q24.3 100729 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC73-SWT1 CDC73 chr1 193236356 + SWT1 chr1 185184243 + Exonic hg38 SARC TCGA-DX-A23R-01A 7 31 In-Frame Intra-chr q31.2 Oncogene Tumor suppressor gene q25.3 Seq+ 100730 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAV3-SLC6A15 NAV3 chr12 78181045 + SLC6A15 chr12 84885561 - Exonic hg38 SARC TCGA-DX-A23R-01A 5 39 Out-of-frame Intra-chr q21.2 q21.31 100731 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNA1C-SLC6A15 CACNA1C chr12 2120430 + SLC6A15 chr12 84870670 - Exonic hg38 SARC TCGA-DX-A23R-01A 9 22 3'UTR-CDS Intra-chr p13.33 q21.31 Seq+ 100732 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRADD-GRIP1 CRADD chr12 93679072 + GRIP1 chr12 66465422 - Exonic hg38 SARC TCGA-DX-A23R-01A 4 35 In-Frame Intra-chr q22 q14.3 Seq+ 100733 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF385A-NAV3 ZNF385A chr12 54384428 - NAV3 chr12 78159203 + Exonic hg38 SARC TCGA-DX-A23R-01A 5 23 In-Frame Intra-chr q13.13 Transcription factor q21.2 Seq+ 100734 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSP2-NFE2 CTDSP2 chr12 57846372 - NFE2 chr12 54295304 - Exonic hg38 SARC TCGA-DX-A23R-01A 6 15 CDS-5'UTR Intra-chr q14.1 q13.13 Transcription factor 100735 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF7-EXOC4 ARHGEF7 chr13 111115691 + EXOC4 chr7 133895599 + Exonic hg38 SARC TCGA-DX-A23R-01A 6 11 In-Frame Inter-chr q34 q33 Seq+ 100736 ChimerSeq TCGA FAWG TCGA_RNA-Seq DERA-DNAJA2 DERA chr12 15911414 + DNAJA2 chr16 46971955 - Exonic hg38 SARC TCGA-DX-A23R-01A 5 15 Out-of-frame Inter-chr p12.3 q11.2 Seq+ 100737 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP1-MARS LRP1 chr12 57173980 + MARS chr12 57514720 + Exonic hg38 SARC TCGA-DX-A23R-01A 2 27 Out-of-frame Intra-chr q13.3 q13.3 100738 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCBP2-RCN2 PCBP2 chr12 53471807 + RCN2 chr15 76943758 + Exonic hg38 SARC TCGA-DX-A23R-01A 4 19 Out-of-frame Inter-chr q13.13 q24.3 100739 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP20A1-ABI2 CYP20A1 chr2 203280113 + ABI2 chr2 203402576 + Exonic hg38 SARC TCGA-DX-A23R-01A 5 13 In-Frame Intra-chr q33.2 q33.2 Tumor suppressor gene 100740 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNA1C-TSPAN8 CACNA1C chr12 2120430 + TSPAN8 chr12 71282819 - Exonic hg38 SARC TCGA-DX-A23R-01A 4 15 3'UTR-5'UTR Intra-chr p13.33 q21.1 Seq+ 100741 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIN7A-TWF1P1 LIN7A chr12 80845730 - TWF1P1 chr17 29204449 - Exonic hg38 SARC TCGA-DX-A23R-01A 7 3 Out-of-frame Inter-chr q21.31 100742 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC35E3-COPZ1 SLC35E3 chr12 68752190 + COPZ1 chr12 54342206 + Exonic hg38 SARC TCGA-DX-A23R-01A 4 14 In-Frame Intra-chr q15 q13.13 100743 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPHB3-PAX2 EPHB3 chr3 184573176 + PAX2 chr10 100806430 + Exonic hg38 SARC TCGA-DX-A23R-01A 3 14 In-Frame Inter-chr q27.1 Tumor suppressor gene q24.31 Transcription factor Seq+ 100744 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIAH1-SLC6A15 SIAH1 chr16 48416816 - SLC6A15 chr12 84873328 - Exonic hg38 SARC TCGA-DX-A23R-01A 2 18 5'UTR-CDS Inter-chr q12.1 Tumor suppressor gene q21.31 100745 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKRN1-NLGN1 MKRN1 chr7 140471883 - NLGN1 chr3 174275315 + Exonic hg38 SARC TCGA-DX-A23R-01A 1 19 Out-of-frame Inter-chr q34 q26.31 Seq+ 100746 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM9SF2-CPM TM9SF2 chr13 99501777 + CPM chr12 68859071 - Exonic hg38 SARC TCGA-DX-A23R-01A 4 6 Out-of-frame Inter-chr q32.3 q15 100747 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSP2-LRP1 CTDSP2 chr12 57846372 - LRP1 chr12 57165805 + Exonic hg38 SARC TCGA-DX-A23R-01A 2 12 In-Frame Intra-chr q14.1 q13.3 100748 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4K4-IL1R2 MAP4K4 chr2 101698538 + IL1R2 chr2 102008515 + Exonic hg38 SARC TCGA-DX-A23R-01A 1 15 CDS-5'UTR Intra-chr q11.2 q11.2 100749 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD1-FAH BTBD1 chr15 83030136 - FAH chr15 80158060 + Exonic hg38 SARC TCGA-DX-A23R-01A 1 14 Out-of-frame Intra-chr q25.2 q25.1 100750 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSP2-CPM CTDSP2 chr12 57846372 - CPM chr12 68859071 - Exonic hg38 SARC TCGA-DX-A23R-01A 2 7 In-Frame Intra-chr q14.1 q15 100751 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPHLN1-TBC1D15 PPHLN1 chr12 42398994 + TBC1D15 chr12 71872070 + Exonic hg38 SARC TCGA-DX-A23R-01A 2 6 In-Frame Intra-chr q12 q21.1 100752 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAWR-DCN PAWR chr12 79689729 - DCN chr12 91178585 - Exonic hg38 SARC TCGA-DX-A23R-01A 1 9 CDS-5'UTR Intra-chr q21.2 Tumor suppressor gene q21.33 Tumor suppressor gene 100753 ChimerSeq TCGA FAWG TCGA_RNA-Seq POMGNT2-FAM19A1 POMGNT2 chr3 43105836 - FAM19A1 chr3 68417280 + Exonic hg38 SARC TCGA-DX-A23R-01A 2 5 Out-of-frame Intra-chr p22.1 p14.1 100754 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRK-PEX5L PTPRK chr6 128184432 - PEX5L chr3 179887784 - Exonic hg38 SARC TCGA-DX-A23R-01A 1 7 5'UTR-5'UTR Inter-chr Tumor suppressor gene q26.33 Seq+ 100755 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFX3-TYRP1 RFX3 chr9 3346667 - TYRP1 chr9 12693912 + Exonic hg38 SARC TCGA-DX-A23R-01A 2 1 CDS-5'UTR Intra-chr p24.2 Transcription factor p23 100756 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHKA1-BIN1 PHKA1 chrX 72652544 - BIN1 chr2 127062197 - Exonic hg38 SARC TCGA-DX-A23R-01A 1 4 In-Frame Inter-chr q13.1 q14.3 Tumor suppressor gene 100757 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGU-AHCY PIGU chr20 34616042 - AHCY chr20 34285634 - Exonic hg38 SARC TCGA-DX-A23R-01A 1 3 In-Frame Intra-chr q11.22 q11.22 100758 ChimerSeq TCGA FAWG TCGA_RNA-Seq BACE2-TACR1 BACE2 chr21 41257326 + TACR1 chr2 75051447 - Exonic hg38 SARC TCGA-DX-A23R-01A 1 2 Out-of-frame Inter-chr q22.2 p12 Seq+ 100759 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYT1-PHKB SYT1 chr12 78865109 + PHKB chr16 47689041 + Exonic hg38 SARC TCGA-DX-A23R-01A 1000 1000 5'UTR-CDS Inter-chr q21.2 q12.1 Seq+ 100760 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNMT1-IGF2 DNMT1 chr19 10151409 - IGF2 chr11 2130664 - Exonic hg38 SARC TCGA-DX-A23R-01A 1000 1000 Out-of-frame Inter-chr p13.2 Oncogene Tumor suppressor gene Transcription factor p15.5 Oncogene 100761 ChimerSeq TCGA FAWG TCGA_RNA-Seq GBF1-CTDSP2 GBF1 chr10 102245781 + CTDSP2 chr12 57824319 - Exonic hg38 SARC TCGA-DX-A23T-01A 27 138 5'UTR-CDS Inter-chr q24.32 q14.1 Seq+ 100762 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSD3-FGL1 PSD3 chr8 18854098 - FGL1 chr8 17885571 - Exonic hg38 SARC TCGA-DX-A23T-01A 4 92 5'UTR-5'UTR Intra-chr p22 p22 Seq+ 100763 ChimerSeq TCGA FAWG TCGA_RNA-Seq GBF1-TRPC6 GBF1 chr10 102245781 + TRPC6 chr11 101504798 - Exonic hg38 SARC TCGA-DX-A23T-01A 6 44 5'UTR-CDS Inter-chr q24.32 q22.1 Seq+ 100764 ChimerSeq TCGA FAWG TCGA_RNA-Seq UTRN-HEBP2 UTRN chr6 144291907 + HEBP2 chr6 138405145 + Exonic hg38 SARC TCGA-DX-A23T-01A 6 43 Out-of-frame Intra-chr q24.2 q24.1 Seq+ 100765 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBPL1-TDRG1 TBPL1 chr6 133982880 + TDRG1 chr6 40379282 + Exonic hg38 SARC TCGA-DX-A23T-01A 5 33 CDS-5'UTR Intra-chr q23.2 Transcription factor p21.2 Tumor suppressor gene Seq+ 100766 ChimerSeq TCGA FAWG TCGA_RNA-Seq YAP1-RNF130 YAP1 chr11 102114394 + RNF130 chr5 180040647 - Exonic hg38 SARC TCGA-DX-A23T-01A 3 31 Out-of-frame Inter-chr q22.1 Tumor suppressor gene q35.3 Seq+ 100767 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLI3-PGC GLI3 chr7 42148226 - PGC chr6 41737004 - Exonic hg38 SARC TCGA-DX-A23T-01A 5 21 Out-of-frame Inter-chr p14.1 Transcription factor p21.1 Seq+ 100768 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN31-OS9 TSPAN31 chr12 57745217 + OS9 chr12 57715760 + Exonic hg38 SARC TCGA-DX-A23T-01A 1 22 In-Frame Intra-chr q14.1 q13.3 Seq+ 100769 ChimerSeq TCGA FAWG TCGA_RNA-Seq UST-BIRC3 UST chr6 148747677 + BIRC3 chr11 102336760 + Exonic hg38 SARC TCGA-DX-A23T-01A 2 7 In-Frame Inter-chr q25.1 q22.2 Oncogene Seq+ 100770 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSMD1-PPP3CC CSMD1 chr8 4994332 - PPP3CC chr8 22527392 + Exonic hg38 SARC TCGA-DX-A23T-01A 2 4 In-Frame Intra-chr p23.2 Tumor suppressor gene p21.3 Tumor suppressor gene Seq+ 100771 ChimerSeq TCGA FAWG TCGA_RNA-Seq EYA4-ANGPTL5 EYA4 chr6 133274813 + ANGPTL5 chr11 101908001 - Exonic hg38 SARC TCGA-DX-A23T-01A 1 5 CDS-5'UTR Inter-chr q23.2 Tumor suppressor gene q22.1 100772 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARCH9-ASAH1 2019_ 3_ 9_ chr12 57755885 + ASAH1 chr8 18063230 - Exonic hg38 SARC TCGA-DX-A23T-01A 1 3 Out-of-frame Inter-chr q14.1 p22 100773 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP8-HYDIN LRP8 chr1 53326873 - HYDIN chr16 71093935 - Exonic hg38 SARC TCGA-DX-A23U-01A 34 90 In-Frame Inter-chr p32.3 Seq+ 100774 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEA15-SNX27 PEA15 chr1 160205522 + SNX27 chr1 151658235 + Exonic hg38 SARC TCGA-DX-A23U-01A 7 41 5'UTR-CDS Intra-chr q23.2 Tumor suppressor gene q21.3 Seq+ 100775 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPA-SLAMF1 COPA chr1 160305433 - SLAMF1 chr1 160634897 - Exonic hg38 SARC TCGA-DX-A23U-01A 6 39 Out-of-frame Intra-chr q23.2 q23.3 Seq+ 100776 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3B-PKN2 RAB3B chr1 51976890 - PKN2 chr1 88740988 + Exonic hg38 SARC TCGA-DX-A23U-01A 5 36 In-Frame Intra-chr p32.3 p22.2 AGC:PKN Seq+ 100777 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPF3-OTUD7B PRPF3 chr1 150346491 + OTUD7B chr1 149971251 - Exonic hg38 SARC TCGA-DX-A23U-01A 1 47 In-Frame Intra-chr q21.2 q21.2 Seq+ 100778 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRDX6-SLC9C2 PRDX6 chr1 173481482 + SLC9C2 chr1 173526714 - Exonic hg38 SARC TCGA-DX-A23U-01A 8 12 In-Frame Intra-chr q25.1 q25.1 100779 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGGY-ATP2B4 FGGY chr1 59457076 + ATP2B4 chr1 203707862 + Exonic hg38 SARC TCGA-DX-A23U-01A 3 31 Out-of-frame Intra-chr p32.1 q32.1 Seq+ 100780 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFYVE9-DNM3OS ZFYVE9 chr1 52142403 + DNM3OS chr1 172144437 - Exonic hg38 SARC TCGA-DX-A23U-01A 5 22 5'UTR-3'UTR Intra-chr p32.3 q24.3 100781 ChimerSeq TCGA FAWG TCGA_RNA-Seq HYDIN2-SSBP3 HYDIN2 chr1 146650451 + SSBP3 chr1 54281527 - Exonic hg38 SARC TCGA-DX-A23U-01A 1 37 5'UTR-CDS Intra-chr q21.1 p32.3 100782 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUFT1-PKN2 TUFT1 chr1 151540426 + PKN2 chr1 88740988 + Exonic hg38 SARC TCGA-DX-A23U-01A 5 17 In-Frame Intra-chr q21.3 p22.2 AGC:PKN Seq+ 100783 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFX5-GOLPH3L RFX5 chr1 151343074 - GOLPH3L chr1 150648748 - Exonic hg38 SARC TCGA-DX-A23U-01A 5 13 In-Frame Intra-chr q21.3 Transcription factor q21.3 100784 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX27-CPT2 SNX27 chr1 151612512 + CPT2 chr1 53200719 + Exonic hg38 SARC TCGA-DX-A23U-01A 4 11 In-Frame Intra-chr q21.3 p32.3 100785 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDK1-BRAT1 SDK1 chr7 3821583 + BRAT1 chr7 2543962 - Exonic hg38 SARC TCGA-DX-A23U-01A 3 9 In-Frame Intra-chr p22.2 p22.3 Seq+ 100786 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBGCP5-ZCCHC11 TUBGCP5 chr15 23003065 - ZCCHC11 chr1 52436978 - Exonic hg38 SARC TCGA-DX-A23U-01A 1 15 Out-of-frame Inter-chr q11.2 p32.3 Seq+ 100787 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFYVE9-ECHDC2 ZFYVE9 chr1 52303925 + ECHDC2 chr1 52899224 - Exonic hg38 SARC TCGA-DX-A23U-01A 1 6 In-Frame Intra-chr p32.3 p32.3 Seq+ 100788 ChimerSeq TCGA FAWG TCGA_RNA-Seq HYDIN-SSBP3 HYDIN chr16 71060504 - SSBP3 chr1 54281527 - Exonic hg38 SARC TCGA-DX-A23U-01A 1000 1000 In-Frame Inter-chr p32.3 Seq+ 100789 ChimerSeq TCGA FAWG TCGA_RNA-Seq YEATS4-PARPBP YEATS4 chr12 69362907 + PARPBP chr12 102195951 + Exonic hg38 SARC TCGA-DX-A23V-01A 64 354 Out-of-frame Intra-chr q15 q23.2 Seq+ 100790 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN31-WIF1 TSPAN31 chr12 57747131 + WIF1 chr12 65077854 - Exonic hg38 SARC TCGA-DX-A23V-01A 49 251 In-Frame Intra-chr q14.1 q14.3 Tumor suppressor gene Seq+ 100791 ChimerSeq TCGA FAWG TCGA_RNA-Seq DRAM1-NTN4 DRAM1 chr12 101877920 + NTN4 chr12 95670146 - Exonic hg38 SARC TCGA-DX-A23V-01A 17 107 Out-of-frame Intra-chr q23.2 q22 Seq+ 100792 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCYL2-GIT2 SCYL2 chr12 100338584 + GIT2 chr12 109961685 - Exonic hg38 SARC TCGA-DX-A23V-01A 16 92 In-Frame Intra-chr q23.1 Other:SCY1 q24.11 100793 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCTN1-FGGY TCTN1 chr12 110614402 + FGGY chr1 59321536 + Exonic hg38 SARC TCGA-DX-A23V-01A 10 74 5'UTR-5'UTR Inter-chr q24.11 p32.1 Seq+ 100794 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNPTAB-FGD6 GNPTAB chr12 101749101 - FGD6 chr12 95172744 - Exonic hg38 SARC TCGA-DX-A23V-01A 9 39 Out-of-frame Intra-chr q23.2 q22 100795 ChimerSeq TCGA FAWG TCGA_RNA-Seq OMA1-CDK4 OMA1 chr1 58506060 - CDK4 chr12 57748617 - Exonic hg38 SARC TCGA-DX-A23V-01A 6 44 In-Frame Inter-chr p32.1 q14.1 CMGC:CDK Oncogene Seq+ 100796 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAB1-CDK4 DAB1 chr1 58506060 - CDK4 chr12 57748617 - Exonic hg38 SARC TCGA-DX-A23V-01A 6 42 5'UTR-CDS Inter-chr p32.1 q14.1 CMGC:CDK Oncogene 100797 ChimerSeq TCGA FAWG TCGA_RNA-Seq YEATS4-USP15 YEATS4 chr12 69362907 + USP15 chr12 62325872 + Exonic hg38 SARC TCGA-DX-A23V-01A 6 27 In-Frame Intra-chr q15 q14.1 100798 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL21B-LTA4H METTL21B chr12 57773128 + LTA4H chr12 96024547 - Exonic hg38 SARC TCGA-DX-A23V-01A 4 34 Out-of-frame Intra-chr q23.1 Seq+ 100799 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGD6-TBC1D30 FGD6 chr12 95134739 - TBC1D30 chr12 64838683 + Exonic hg38 SARC TCGA-DX-A23V-01A 4 31 In-Frame Intra-chr q22 q14.3 Seq+ 100800 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYDE2-TCTN1 SYDE2 chr1 85200252 - TCTN1 chr12 110619836 + Exonic hg38 SARC TCGA-DX-A23V-01A 4 6 In-Frame Inter-chr p22.3 q24.11 Seq+ 100801 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTLL7-TTC41P TTLL7 chr1 83937852 - TTC41P chr12 103916083 - Exonic hg38 SARC TCGA-DX-A23V-01A 1 11 CDS-3'UTR Inter-chr p31.1 q23.3 100802 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRHDE-ANKS1B TRHDE chr12 72563040 + ANKS1B chr12 98751522 - Exonic hg38 SARC TCGA-DX-A23V-01A 1 9 Out-of-frame Intra-chr q21.1 q23.1 Seq+ 100803 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP15-ANKS1B USP15 chr12 62325933 + ANKS1B chr12 98751522 - Exonic hg38 SARC TCGA-DX-A23V-01A 1 3 Out-of-frame Intra-chr q14.1 q23.1 100804 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPSF6-TSPAN31 CPSF6 chr12 69239706 + TSPAN31 chr12 57746589 + Exonic hg38 SARC TCGA-DX-A23Y-01A 256 2016 In-Frame Intra-chr q15 q14.1 Seq+ 100805 ChimerSeq TCGA FAWG TCGA_RNA-Seq NHSL1-PRDM1 NHSL1 chr6 138496219 - PRDM1 chr6 106088201 + Exonic hg38 SARC TCGA-DX-A23Y-01A 71 247 CDS-5'UTR Intra-chr q24.1 q21 Oncogene Tumor suppressor gene Transcription factor Seq+ 100806 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCT2-DEPDC4 CCT2 chr12 69593613 + DEPDC4 chr12 100252536 - Exonic hg38 SARC TCGA-DX-A23Y-01A 30 181 In-Frame Intra-chr q15 q23.1 Seq+ 100807 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS18A-TRAF3IP2 MRPS18A chr6 43671840 - TRAF3IP2 chr6 111572983 - Exonic hg38 SARC TCGA-DX-A23Y-01A 24 81 In-Frame Intra-chr p21.1 q21 100808 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRMT61A-NDUFA12 TRMT61A chr14 103532848 + NDUFA12 chr12 94994257 - Exonic hg38 SARC TCGA-DX-A23Y-01A 20 90 In-Frame Inter-chr q32.33 q22 Seq+ 100809 ChimerSeq TCGA FAWG TCGA_RNA-Seq POP4-CLEC2B POP4 chr19 29606325 + CLEC2B chr12 9857637 - Exonic hg38 SARC TCGA-DX-A23Y-01A 28 1 In-Frame Inter-chr q12 p13.31 Seq+ 100810 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1CC-KCNC2 PPP1CC chr12 110742653 - KCNC2 chr12 75041206 - Exonic hg38 SARC TCGA-DX-A23Y-01A 6 62 In-Frame Intra-chr q24.11 q21.1 Seq+ 100811 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTK-TMEM63B TTK chr6 80011548 + TMEM63B chr6 44151846 + Exonic hg38 SARC TCGA-DX-A23Y-01A 9 30 In-Frame Intra-chr q14.1 Other:TTK p21.1 Seq+ 100812 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDM2-C12orf50 MDM2 chr12 68813628 + C12orf50 chr12 88030237 - Exonic hg38 SARC TCGA-DX-A23Y-01A 7 37 CDS-5'UTR Intra-chr q15 Oncogene q21.32 100813 ChimerSeq TCGA FAWG TCGA_RNA-Seq NT5E-MDM2 NT5E chr6 85450478 + MDM2 chr12 68813554 + Exonic hg38 SARC TCGA-DX-A23Y-01A 4 44 In-Frame Inter-chr q14.3 q15 Oncogene 100814 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTK7-CNOT2 PTK7 chr6 43076567 + CNOT2 chr12 70353829 + Exonic hg38 SARC TCGA-DX-A23Y-01A 7 30 Out-of-frame Inter-chr p21.1 q15 Seq+ 100815 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPIL4-CLEC4A PPIL4 chr6 149525143 - CLEC4A chr12 8135585 + Exonic hg38 SARC TCGA-DX-A23Y-01A 4 41 Out-of-frame Inter-chr q25.1 p13.31 Seq+ 100816 ChimerSeq TCGA FAWG TCGA_RNA-Seq ORC6-SHCBP1 ORC6 chr16 46696085 + SHCBP1 chr16 46621409 - Exonic hg38 SARC TCGA-DX-A23Y-01A 8 21 5'UTR-5'UTR Intra-chr q11.2 q11.2 100817 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA2-MRPL14 PPFIA2 chr12 81676791 - MRPL14 chr6 44116629 - Exonic hg38 SARC TCGA-DX-A23Y-01A 10 7 In-Frame Inter-chr q21.31 p21.1 Seq+ 100818 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSFM-FRS2 TSFM chr12 57793073 + FRS2 chr12 69486202 + Exonic hg38 SARC TCGA-DX-A23Y-01A 6 18 CDS-5'UTR Intra-chr q14.1 q15 Seq+ 100819 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFDP2-LONP2 TFDP2 chr3 142149183 - LONP2 chr16 48262778 + Exonic hg38 SARC TCGA-DX-A23Y-01A 6 16 5'UTR-CDS Inter-chr q23 Transcription factor q12.1 Seq+ 100820 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLH-C12orf71 POLH chr6 43605319 + C12orf71 chr12 27081467 - Exonic hg38 SARC TCGA-DX-A23Y-01A 5 18 In-Frame Inter-chr p21.1 p11.23 Seq+ 100821 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNRD1ASP-TRIM40 ZNRD1ASP chr6 30060741 - TRIM40 chr6 30136412 + Exonic hg38 SARC TCGA-DX-A23Y-01A 3 23 5'UTR-3'UTR Intra-chr 100822 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV6-EPB41L2 ETV6 chr12 11650160 + EPB41L2 chr6 130901180 - Exonic hg38 SARC TCGA-DX-A23Y-01A 4 14 Out-of-frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q23.2 Seq+ 100823 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF354C-PRSS3 ZNF354C chr5 179062095 + PRSS3 chr9 33796643 + Exonic hg38 SARC TCGA-DX-A23Y-01A 5 7 Out-of-frame Inter-chr q35.3 Transcription factor p13.3 Seq+ 100824 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPPL3-KRR1 SPPL3 chr12 120903845 - KRR1 chr12 75508446 - Exonic hg38 SARC TCGA-DX-A23Y-01A 3 12 Out-of-frame Intra-chr q24.31 q21.2 100825 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-CAPS2 FRS2 chr12 69470530 + CAPS2 chr12 75321576 - Exonic hg38 SARC TCGA-DX-A23Y-01A 2 12 5'UTR-5'UTR Intra-chr q15 q21.2 100826 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFA12-43 NDUFA12 chr12 94994170 - 43 chr14 106470571 - Exonic hg38 SARC TCGA-DX-A23Y-01A 4 3 Out-of-frame Inter-chr q22 transporter 100827 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF13-DECR1 DCAF13 chr8 103427252 + DECR1 chr8 90036841 + Exonic hg38 SARC TCGA-DX-A23Y-01A 1 11 Out-of-frame Intra-chr q22.3 q21.3 100828 ChimerSeq TCGA FAWG TCGA_RNA-Seq HVCN1-CPM HVCN1 chr12 110688625 - CPM chr12 68885889 - Exonic hg38 SARC TCGA-DX-A23Y-01A 2 4 5'UTR-CDS Intra-chr q24.11 q15 100829 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAG1-ANKS1B STAG1 chr3 136464881 - ANKS1B chr12 99154395 - Exonic hg38 SARC TCGA-DX-A23Y-01A 1 8 Out-of-frame Inter-chr q22.3 q23.1 Seq+ 100830 ChimerSeq TCGA FAWG TCGA_RNA-Seq BEST3-MYRFL BEST3 chr12 69699205 - MYRFL chr12 69903644 + Exonic hg38 SARC TCGA-DX-A23Y-01A 2 2 5'UTR-CDS Intra-chr q15 q15 Transcription factor 100831 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRYBG3-FRS2 CRYBG3 chr3 97881219 + FRS2 chr12 69530865 + Exonic hg38 SARC TCGA-DX-A23Y-01A 1 6 CDS-5'UTR Inter-chr q11.2 q15 100832 ChimerSeq TCGA FAWG TCGA_RNA-Seq SC5D-SPA17 SC5D chr11 121292816 + SPA17 chr11 124675238 + Exonic hg38 SARC TCGA-DX-A23Z-01A 179 173 5'UTR-5'UTR Intra-chr q23.3 q24.2 Seq+ 100833 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAB2-SIK2 TAB2 chr6 149398062 + SIK2 chr11 111730257 + Exonic hg38 SARC TCGA-DX-A23Z-01A 56 432 CDS-3'UTR Inter-chr q25.1 q23.1 Seq+ 100834 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM27-PTPRR TRIM27 chr6 28911696 - PTPRR chr12 70656817 - Exonic hg38 SARC TCGA-DX-A23Z-01A 29 121 5'UTR-CDS Inter-chr q15 Seq+ 100835 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMBIM4-PBX3 TMBIM4 chr12 66169855 - PBX3 chr9 125929655 + Exonic hg38 SARC TCGA-DX-A23Z-01A 4 114 In-Frame Inter-chr q14.3 q33.3 Transcription factor Seq+ 100836 ChimerSeq TCGA FAWG TCGA_RNA-Seq CIZ1-SWI5 CIZ1 chr9 128185547 - SWI5 chr9 128284510 + Exonic hg38 SARC TCGA-DX-A23Z-01A 4 38 In-Frame Intra-chr q34.11 Tumor suppressor gene q34.11 Seq+ 100837 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARFGEF1-CCDC94 ARFGEF1 chr8 67211483 - CCDC94 chr19 4261994 + Exonic hg38 SARC TCGA-DX-A23Z-01A 6 11 Out-of-frame Inter-chr q13.2 p13.3 Seq+ 100838 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSPH3-NOTCH4 RSPH3 chr6 158999435 - NOTCH4 chr6 32203882 - Exonic hg38 SARC TCGA-DX-A23Z-01A 5 14 CDS-5'UTR Intra-chr q25.3 Oncogene Seq+ 100839 ChimerSeq TCGA FAWG TCGA_RNA-Seq SWI5-ATG16L2 SWI5 chr9 128286033 + ATG16L2 chr11 72842617 + Exonic hg38 SARC TCGA-DX-A23Z-01A 4 16 CDS-3'UTR Inter-chr q34.11 q13.4 Seq+ 100840 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB6A-MICA RAB6A chr11 73730765 - MICA chr6 31410543 + Exonic hg38 SARC TCGA-DX-A23Z-01A 1 23 CDS-3'UTR Inter-chr q13.4 p21.33 Seq+ 100841 ChimerSeq TCGA FAWG TCGA_RNA-Seq SASH1-MSANTD2 SASH1 chr6 148544818 + MSANTD2 chr11 124779139 - Exonic hg38 SARC TCGA-DX-A23Z-01A 3 14 CDS-5'UTR Inter-chr q24.3 Tumor suppressor gene q24.2 100842 ChimerSeq TCGA FAWG TCGA_RNA-Seq SASH1-POLR3A SASH1 chr6 148440407 + POLR3A chr10 77980273 - Exonic hg38 SARC TCGA-DX-A23Z-01A 6 1 Out-of-frame Inter-chr q24.3 Tumor suppressor gene q22.3 Seq+ 100843 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAAF1-NCR3 PAAF1 chr11 73877068 + NCR3 chr6 31589899 - Exonic hg38 SARC TCGA-DX-A23Z-01A 3 12 5'UTR-5'UTR Inter-chr q13.4 Seq+ 100844 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSP2-FRS2 CTDSP2 chr12 57846372 - FRS2 chr12 69530865 + Exonic hg38 SARC TCGA-DX-A23Z-01A 4 6 CDS-5'UTR Intra-chr q14.1 q15 Seq+ 100845 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRHDE-DPY19L2 TRHDE chr12 72286954 + DPY19L2 chr12 63621337 - Exonic hg38 SARC TCGA-DX-A23Z-01A 1 17 Out-of-frame Intra-chr q21.1 q14.2 Seq+ 100846 ChimerSeq TCGA FAWG TCGA_RNA-Seq UST-FOXP2 UST chr6 148747677 + FOXP2 chr7 114534617 + Exonic hg38 SARC TCGA-DX-A23Z-01A 3 6 Out-of-frame Inter-chr q25.1 q31.1 Transcription factor Seq+ 100847 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP1-PTPRR SRGAP1 chr12 63844883 + PTPRR chr12 70764778 - Exonic hg38 SARC TCGA-DX-A23Z-01A 2 9 Out-of-frame Intra-chr q14.2 q15 Seq+ 100848 ChimerSeq TCGA FAWG TCGA_RNA-Seq HECTD4-YAP1 HECTD4 chr12 112381952 - YAP1 chr11 102205893 + Exonic hg38 SARC TCGA-DX-A23Z-01A 2 6 Out-of-frame Inter-chr q24.13 q22.1 Tumor suppressor gene Seq+ 100849 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX10-RAB6A DDX10 chr11 108852209 + RAB6A chr11 73677962 - Exonic hg38 SARC TCGA-DX-A23Z-01A 2 2 Out-of-frame Intra-chr q22.3 q13.4 100850 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS4-STAT4 INTS4 chr11 77883832 - STAT4 chr2 191146757 - Exonic hg38 SARC TCGA-DX-A23Z-01A 1 4 Out-of-frame Inter-chr q14.1 q32.3 Transcription factor 100851 ChimerSeq TCGA FAWG TCGA_RNA-Seq NECTIN1-KDELC2 NECTIN1 chr11 119728475 - KDELC2 chr11 108491167 - Exonic hg38 SARC TCGA-DX-A23Z-01A 1 3 Out-of-frame Intra-chr q23.3 q22.3 100852 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL1RAPL1-KERA IL1RAPL1 chrX 29668504 + KERA chr12 91057794 - Exonic hg38 SARC TCGA-DX-A240-01A 151 675 CDS-5'UTR Inter-chr p21.3 q21.33 100853 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGC-KERA PIGC chr1 172443988 - KERA chr12 91057794 - Exonic hg38 SARC TCGA-DX-A240-01A 30 291 5'UTR-5'UTR Inter-chr q24.3 q21.33 100854 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC2A13-ARHGDIB SLC2A13 chr12 40028301 - ARHGDIB chr12 14947949 - Exonic hg38 SARC TCGA-DX-A240-01A 19 87 In-Frame Intra-chr q12 p12.3 Seq+ 100855 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF6-UFC1 DCAF6 chr1 167951861 + UFC1 chr1 161153926 + Exonic hg38 SARC TCGA-DX-A240-01A 21 65 5'UTR-5'UTR Intra-chr q24.2 q23.3 100856 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADIPOR2-SLC2A13 ADIPOR2 chr12 1754514 + SLC2A13 chr12 40048210 - Exonic hg38 SARC TCGA-DX-A240-01A 10 72 3'UTR-CDS Intra-chr p13.33 q12 Seq+ 100857 ChimerSeq TCGA FAWG TCGA_RNA-Seq OS9-CD48 OS9 chr12 57696373 + CD48 chr1 160681468 - Exonic hg38 SARC TCGA-DX-A240-01A 13 29 Out-of-frame Inter-chr q13.3 q23.3 100858 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBBP7-NDUFAF4 RBBP7 chrX 16869076 - NDUFAF4 chr6 96896847 - Exonic hg38 SARC TCGA-DX-A240-01A 5 52 Out-of-frame Inter-chr p22.2 Tumor suppressor gene q16.1 Seq+ 100859 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDM2-SLAMF9 MDM2 chr12 68836749 + SLAMF9 chr1 159953653 - Exonic hg38 SARC TCGA-DX-A240-01A 10 19 Out-of-frame Inter-chr q15 Oncogene q23.2 Seq+ 100860 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAP1B-IGSF8 RAP1B chr12 68654252 + IGSF8 chr1 160095246 - Exonic hg38 SARC TCGA-DX-A240-01A 5 27 Out-of-frame Inter-chr q15 q23.2 100861 ChimerSeq TCGA FAWG TCGA_RNA-Seq NHS-F11R NHS chrX 17376322 + F11R chr1 161001353 - Exonic hg38 SARC TCGA-DX-A240-01A 4 29 In-Frame Inter-chr p22.2 q23.3 Seq+ 100862 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIGAR-CRP TIGAR chr12 4321303 + CRP chr1 159714528 - Exonic hg38 SARC TCGA-DX-A240-01A 4 21 CDS-5'UTR Inter-chr p13.32 q23.2 100863 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPNE8-PRMT8 CPNE8 chr12 38873004 - PRMT8 chr12 3540606 + Exonic hg38 SARC TCGA-DX-A240-01A 2 10 In-Frame Intra-chr q12 p13.32 Seq+ 100864 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIT1-TIGAR NIT1 chr1 161120232 + TIGAR chr12 4349819 + Exonic hg38 SARC TCGA-DX-A240-01A 2 6 In-Frame Inter-chr q23.3 p13.32 100865 ChimerSeq TCGA FAWG TCGA_RNA-Seq BICD1-OS9 BICD1 chr12 32334667 + OS9 chr12 57715760 + Exonic hg38 SARC TCGA-DX-A240-01A 2 4 Out-of-frame Intra-chr p11.21 q13.3 100866 ChimerSeq TCGA FAWG TCGA_RNA-Seq DMD-TMEM117 DMD chrX 32518008 - TMEM117 chr12 44211290 + Exonic hg38 SARC TCGA-DX-A240-01A 2 4 In-Frame Inter-chr p21.1 Tumor suppressor gene q12 Seq+ 100867 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC2A13-HSD17B6 SLC2A13 chr12 40105253 - HSD17B6 chr12 56773834 + Exonic hg38 SARC TCGA-DX-A240-01A 2 2 CDS-5'UTR Intra-chr q12 q13.3 Seq+ 100868 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDH2-FGL2 MDH2 chr7 76048226 + FGL2 chr7 77196985 - Exonic hg38 SARC TCGA-DX-A240-01A 1 4 Out-of-frame Intra-chr q11.23 q11.23 100869 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSP90B1-TMEM19 HSP90B1 chr12 103934287 + TMEM19 chr12 71689591 + Exonic hg38 SARC TCGA-DX-A2IZ-01A 107 520 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q21.1 Seq+ 100870 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL7-NRDC FBXL7 chr5 15616072 + NRDC chr1 51834170 - Exonic hg38 SARC TCGA-DX-A2IZ-01A 53 441 In-Frame Inter-chr p15.1 p32.3 100871 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOK-MUCL1 MOK chr14 102304962 - MUCL1 chr12 54855116 + Exonic hg38 SARC TCGA-DX-A2IZ-01A 39 369 In-Frame Inter-chr q32.31 CMGC:RCK q13.2 Seq+ 100872 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-CPM FRS2 chr12 69470530 + CPM chr12 68885889 - Exonic hg38 SARC TCGA-DX-A2IZ-01A 17 402 5'UTR-CDS Intra-chr q15 q15 Seq+ 100873 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLT8D2-YY1 GLT8D2 chr12 104003135 - YY1 chr14 100274698 + Exonic hg38 SARC TCGA-DX-A2IZ-01A 54 249 In-Frame Inter-chr q23.3 q32.2 Transcription factor Seq+ 100874 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R13B-PYM1 PPP1R13B chr14 103847299 - PYM1 chr12 55903480 - Exonic hg38 SARC TCGA-DX-A2IZ-01A 30 66 Out-of-frame Inter-chr q32.33 q13.2 100875 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDCD6-FRS2 PDCD6 chr5 272772 + FRS2 chr12 69571276 + Exonic hg38 SARC TCGA-DX-A2IZ-01A 12 133 In-Frame Inter-chr p15.33 q15 Seq+ 100876 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAP1B-SCYL2 RAP1B chr12 68611052 + SCYL2 chr12 100317803 + Exonic hg38 SARC TCGA-DX-A2IZ-01A 3 167 5'UTR-CDS Intra-chr q15 q23.1 Other:SCY1 Seq+ 100877 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPRYD4-MDM1 SPRYD4 chr12 56472089 + MDM1 chr12 68326908 - Exonic hg38 SARC TCGA-DX-A2IZ-01A 16 93 Out-of-frame Intra-chr q13.3 q15 Seq+ 100878 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNPTAB-TRHDE GNPTAB chr12 101830559 - TRHDE chr12 72286681 + Exonic hg38 SARC TCGA-DX-A2IZ-01A 20 65 Out-of-frame Intra-chr q23.2 q21.1 Seq+ 100879 ChimerSeq TCGA FAWG TCGA_RNA-Seq YY1-TESPA1 YY1 chr14 100239923 + TESPA1 chr12 54950390 - Exonic hg38 SARC TCGA-DX-A2IZ-01A 12 62 CDS-3'UTR Inter-chr q32.2 Transcription factor q13.2 Seq+ 100880 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHST11-PTPRR CHST11 chr12 104601991 + PTPRR chr12 70764778 - Exonic hg38 SARC TCGA-DX-A2IZ-01A 4 80 In-Frame Intra-chr q23.3 q15 Seq+ 100881 ChimerSeq TCGA FAWG TCGA_RNA-Seq APPL2-TUBA1C APPL2 chr12 105229125 - TUBA1C chr12 49269465 + Exonic hg38 SARC TCGA-DX-A2IZ-01A 9 44 In-Frame Intra-chr q23.3 q13.12 Seq+ 100882 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAT2-B4GALNT1 STAT2 chr12 56360058 - B4GALNT1 chr12 57632133 - Exonic hg38 SARC TCGA-DX-A2IZ-01A 7 33 5'UTR-5'UTR Intra-chr q13.3 Transcription factor q13.3 Seq+ 100883 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC127-MUCL1 CCDC127 chr5 216729 - MUCL1 chr12 54856770 + Exonic hg38 SARC TCGA-DX-A2IZ-01A 3 48 In-Frame Inter-chr p15.33 q13.2 Seq+ 100884 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPRED1-TMCO5B SPRED1 chr15 38253217 + TMCO5B chr15 33246613 - Exonic hg38 SARC TCGA-DX-A2IZ-01A 12 9 CDS-3'UTR Intra-chr q14 q13.3 Seq+ 100885 ChimerSeq TCGA FAWG TCGA_RNA-Seq YEATS4-AGAP2 YEATS4 chr12 69365884 + AGAP2 chr12 57734173 - Exonic hg38 SARC TCGA-DX-A2IZ-01A 3 38 In-Frame Intra-chr q15 q14.1 Seq+ 100886 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB21-MYBPC1 RAB21 chr12 71755288 + MYBPC1 chr12 101614496 + Exonic hg38 SARC TCGA-DX-A2IZ-01A 3 32 Out-of-frame Intra-chr q21.1 q23.2 Seq+ 100887 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRHDE-TBC1D15 TRHDE chr12 72378121 + TBC1D15 chr12 71893222 + Exonic hg38 SARC TCGA-DX-A2IZ-01A 5 22 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 100888 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHPT1-TXNRD1 CHPT1 chr12 101698134 + TXNRD1 chr12 104313245 + Exonic hg38 SARC TCGA-DX-A2IZ-01A 4 23 In-Frame Intra-chr q23.2 q23.3 Seq+ 100889 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHRR-AVIL AHRR chr5 376716 + AVIL chr12 57799920 - Exonic hg38 SARC TCGA-DX-A2IZ-01A 3 23 In-Frame Inter-chr p15.33 Tumor suppressor gene Transcription factor q14.1 Seq+ 100890 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAN2-LYZ PAN2 chr12 56324294 - LYZ chr12 69350108 + Exonic hg38 SARC TCGA-DX-A2IZ-01A 1 24 Out-of-frame Intra-chr q13.3 q15 100891 ChimerSeq TCGA FAWG TCGA_RNA-Seq YEATS4-ARHGEF25 YEATS4 chr12 69370975 + ARHGEF25 chr12 57614331 + Exonic hg38 SARC TCGA-DX-A2IZ-01A 2 17 Out-of-frame Intra-chr q15 q13.3 Seq+ 100892 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM19A2-TMBIM4 FAM19A2 chr12 61753622 - TMBIM4 chr12 66153448 - Exonic hg38 SARC TCGA-DX-A2IZ-01A 4 5 Out-of-frame Intra-chr q14.1 q14.3 Seq+ 100893 ChimerSeq TCGA FAWG TCGA_RNA-Seq SARNP-NT5DC3 SARNP chr12 55794359 - NT5DC3 chr12 103806929 - Exonic hg38 SARC TCGA-DX-A2IZ-01A 2 13 Out-of-frame Intra-chr q13.2 q23.3 Seq+ 100894 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA7-MYRFL ITGA7 chr12 55695522 - MYRFL chr12 69955363 + Exonic hg38 SARC TCGA-DX-A2IZ-01A 3 7 In-Frame Intra-chr q13.2 Tumor suppressor gene q15 Transcription factor Seq+ 100895 ChimerSeq TCGA FAWG TCGA_RNA-Seq NT5DC3-PTPRR NT5DC3 chr12 103814937 - PTPRR chr12 70764778 - Exonic hg38 SARC TCGA-DX-A2IZ-01A 2 7 In-Frame Intra-chr q23.3 q15 Seq+ 100896 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC35E3-TMEM132B SLC35E3 chr12 68752190 + TMEM132B chr12 125583851 + Exonic hg38 SARC TCGA-DX-A2IZ-01A 2 6 In-Frame Intra-chr q15 q24.31 Seq+ 100897 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBD6-CPM MBD6 chr12 57524416 + CPM chr12 68957678 - Exonic hg38 SARC TCGA-DX-A2IZ-01A 1 7 CDS-5'UTR Intra-chr q13.3 Transcription factor q15 100898 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFYB-HCFC2 NFYB chr12 104128424 - HCFC2 chr12 104087986 + Exonic hg38 SARC TCGA-DX-A2IZ-01A 1 7 In-Frame Intra-chr q23.3 Transcription factor q23.3 100899 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAP-ESYT1 DAP chr5 10748175 - ESYT1 chr12 56142578 + Exonic hg38 SARC TCGA-DX-A2IZ-01A 1 6 Out-of-frame Inter-chr p15.2 q13.2 100900 ChimerSeq TCGA FAWG TCGA_RNA-Seq RYR3-LRRC57 RYR3 chr15 33311096 + LRRC57 chr15 42545262 - Exonic hg38 SARC TCGA-DX-A2IZ-01A 1 1 In-Frame Intra-chr q13.3 q15.2 100901 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPZL1-TNFSF4 MPZL1 chr1 167776166 + TNFSF4 chr1 173188569 - Exonic hg38 SARC TCGA-DX-A2J0-01A 16 175 In-Frame Intra-chr q24.2 q25.1 Seq+ 100902 ChimerSeq TCGA FAWG TCGA_RNA-Seq C21orf91-COLGALT2 C21orf91 chr21 17818192 - COLGALT2 chr1 183945564 - Exonic hg38 SARC TCGA-DX-A2J0-01A 11 104 Out-of-frame Inter-chr q21.1 q25.3 Seq+ 100903 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPSF6-MYF6 CPSF6 chr12 69239706 + MYF6 chr12 80707855 + Exonic hg38 SARC TCGA-DX-A2J0-01A 10 40 Out-of-frame Intra-chr q15 q21.31 Transcription factor Seq+ 100904 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSFM-RCSD1 TSFM chr12 57783283 + RCSD1 chr1 167630243 + Exonic hg38 SARC TCGA-DX-A2J0-01A 5 50 CDS-5'UTR Inter-chr q14.1 q24.2 Seq+ 100905 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL25-GALNT9 METTL25 chr12 82403130 + GALNT9 chr12 132286430 - Exonic hg38 SARC TCGA-DX-A2J0-01A 7 37 In-Frame Intra-chr q21.31 q24.33 Seq+ 100906 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIO-TERT TRIO chr5 14406672 + TERT chr5 1282624 - Exonic hg38 SARC TCGA-DX-A2J0-01A 7 33 Out-of-frame Intra-chr p15.2 p15.33 Oncogene Seq+ 100907 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELK3-CDK17 ELK3 chr12 96223773 + CDK17 chr12 96300360 - Exonic hg38 SARC TCGA-DX-A2J0-01A 5 24 In-Frame Intra-chr q23.1 Transcription factor q23.1 Seq+ 100908 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBX15-FMN2 TBX15 chr1 118987591 - FMN2 chr1 240257945 + Exonic hg38 SARC TCGA-DX-A2J0-01A 6 17 Out-of-frame Intra-chr p12 Transcription factor q43 Seq+ 100909 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAGI3-MROH3P MAGI3 chr1 113590658 + MROH3P chr1 200948092 + Exonic hg38 SARC TCGA-DX-A2J0-01A 5 14 CDS-5'UTR Intra-chr p13.2 q32.1 Seq+ 100910 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMBIM4-NAV3 TMBIM4 chr12 66169855 - NAV3 chr12 78127167 + Exonic hg38 SARC TCGA-DX-A2J0-01A 3 19 Out-of-frame Intra-chr q14.3 q21.2 Seq+ 100911 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD244-DDR2 CD244 chr1 160838451 - DDR2 chr1 162741579 + Exonic hg38 SARC TCGA-DX-A2J0-01A 3 14 Out-of-frame Intra-chr q23.3 q23.3 TK:DDR Oncogene Tumor suppressor gene Seq+ 100912 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBX15-MAGI3 TBX15 chr1 118987591 - MAGI3 chr1 113580542 + Exonic hg38 SARC TCGA-DX-A2J0-01A 2 14 In-Frame Intra-chr p12 Transcription factor p13.2 Seq+ 100913 ChimerSeq TCGA FAWG TCGA_RNA-Seq BROX-SUSD4 BROX chr1 222712942 + SUSD4 chr1 223359121 - Exonic hg38 SARC TCGA-DX-A2J0-01A 2 13 5'UTR-CDS Intra-chr q41 q41 Seq+ 100914 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUCO-C12orf42 SUCO chr1 172533497 + C12orf42 chr12 103302559 - Exonic hg38 SARC TCGA-DX-A2J0-01A 1 17 Out-of-frame Inter-chr q24.3 q23.2 100915 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOAT1-AGAP2 SOAT1 chr1 179347697 + AGAP2 chr12 57735427 - Exonic hg38 SARC TCGA-DX-A2J0-01A 1 14 Out-of-frame Inter-chr q25.2 q14.1 Seq+ 100916 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUCO-LIN7A SUCO chr1 172533497 + LIN7A chr12 80811683 - Exonic hg38 SARC TCGA-DX-A2J0-01A 3 6 Out-of-frame Inter-chr q24.3 q21.31 Seq+ 100917 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC17-NAV3 ZDHHC17 chr12 76764329 + NAV3 chr12 78146369 + Exonic hg38 SARC TCGA-DX-A2J0-01A 2 7 In-Frame Intra-chr q21.2 q21.2 Seq+ 100918 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC59-KCNMB4 CCDC59 chr12 82354495 - KCNMB4 chr12 70430485 + Exonic hg38 SARC TCGA-DX-A2J0-01A 1 10 Out-of-frame Intra-chr q21.31 q15 100919 ChimerSeq TCGA FAWG TCGA_RNA-Seq IRAK3-DYRK2 IRAK3 chr12 66228370 + DYRK2 chr12 67657106 + Exonic hg38 SARC TCGA-DX-A2J0-01A 1 6 Out-of-frame Intra-chr q14.3 TKL:IRAK q15 CMGC:DYRK Seq+ 100920 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX59-CEPT1 DDX59 chr1 200648439 - CEPT1 chr1 111182187 + Exonic hg38 SARC TCGA-DX-A2J0-01A 1 3 In-Frame Intra-chr q32.1 p13.3 100921 ChimerSeq TCGA FAWG TCGA_RNA-Seq NR4A1-SARNP NR4A1 chr12 52043911 + SARNP chr12 55757553 - Exonic hg38 SARC TCGA-DX-A2J1-01A 276 2200 5'UTR-CDS Intra-chr q13.13 Tumor suppressor gene Transcription factor q13.2 100922 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGA2-SARNP HMGA2 chr12 65951415 + SARNP chr12 55752840 - Exonic hg38 SARC TCGA-DX-A2J1-01A 123 1331 CDS-3'UTR Intra-chr q14.3 Transcription factor q13.2 Seq+ 100923 ChimerSeq TCGA FAWG TCGA_RNA-Seq ORMDL2-NR4A1 ORMDL2 chr12 55818112 + NR4A1 chr12 52043694 + Exonic hg38 SARC TCGA-DX-A2J1-01A 36 71 5'UTR-5'UTR Intra-chr q13.2 q13.13 Tumor suppressor gene Transcription factor 100924 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP1-TMEM5 SRGAP1 chr12 63844883 + TMEM5 chr12 63808675 + Exonic hg38 SARC TCGA-DX-A2J1-01A 13 63 Out-of-frame Intra-chr q14.2 q14.2 Seq+ 100925 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDM2-NAV3 MDM2 chr12 68813628 + NAV3 chr12 77571859 + Exonic hg38 SARC TCGA-DX-A2J1-01A 7 40 CDS-5'UTR Intra-chr q15 Oncogene q21.2 100926 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC17-MMP27 ZDHHC17 chr12 76764812 + MMP27 chr11 102703118 - Exonic hg38 SARC TCGA-DX-A2J1-01A 7 40 Out-of-frame Inter-chr q21.2 q22.2 Seq+ 100927 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGA2-CD63 HMGA2 chr12 65951415 + CD63 chr12 55727339 - Exonic hg38 SARC TCGA-DX-A2J1-01A 6 31 In-Frame Intra-chr q14.3 Transcription factor q13.2 100928 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGST1-COL27A1 MGST1 chr12 16347710 + COL27A1 chr9 114282277 + Exonic hg38 SARC TCGA-DX-A2J1-01A 3 6 5'UTR-CDS Inter-chr p12.3 q32 Seq+ 100929 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPATS2-ATP5G2 SPATS2 chr12 49371290 + ATP5G2 chr12 53665428 - Exonic hg38 SARC TCGA-DX-A2J1-01A 1 11 Out-of-frame Intra-chr q13.12 q13.13 100930 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB24-BEST3 ZBTB24 chr6 109481075 - BEST3 chr12 69655813 - Exonic hg38 SARC TCGA-DX-A2J1-01A 2 7 Out-of-frame Inter-chr q21 Transcription factor q15 Seq+ 100931 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK19-LYZ CDK19 chr6 110667434 - LYZ chr12 69350108 + Exonic hg38 SARC TCGA-DX-A2J1-01A 1 6 Out-of-frame Inter-chr q21 q15 Seq+ 100932 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPF2-SLC16A10 RPF2 chr6 111008137 + SLC16A10 chr6 111172695 + Exonic hg38 SARC TCGA-DX-A2J1-01A 1 1 In-Frame Intra-chr q21 q21 100933 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF562-DTX3 ZNF562 chr19 9675015 - DTX3 chr12 57604795 + Exonic hg38 SARC TCGA-DX-A2J4-01A 11 50 5'UTR-5'UTR Inter-chr p13.2 Transcription factor q13.3 Seq+ 100934 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF44-MYRFL ZNF44 chr19 12294692 - MYRFL chr12 69952799 + Exonic hg38 SARC TCGA-DX-A2J4-01A 15 26 Out-of-frame Inter-chr p13.2 Transcription factor q15 Transcription factor 100935 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN19-CPSF6 TSPAN19 chr12 85014320 - CPSF6 chr12 69273864 + Exonic hg38 SARC TCGA-DX-A2J4-01A 6 18 Out-of-frame Intra-chr q21.31 q15 100936 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA1-L3MBTL4 LAMA1 chr18 6980521 - L3MBTL4 chr18 6138296 - Exonic hg38 SARC TCGA-DX-A2J4-01A 1 16 In-Frame Intra-chr p11.31 p11.31 Tumor suppressor gene Transcription factor 100937 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPAP3-AVIL RPAP3 chr12 47679493 - AVIL chr12 57803669 - Exonic hg38 SARC TCGA-DX-A2J4-01A 1 11 In-Frame Intra-chr q13.11 q14.1 Seq+ 100938 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA2-SYT1 PPFIA2 chr12 81457765 - SYT1 chr12 79047297 + Exonic hg38 SARC TCGA-DX-A2J4-01A 1 3 5'UTR-5'UTR Intra-chr q21.31 q21.2 100939 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTN4-NIPAL2 ACTN4 chr19 38724616 + NIPAL2 chr8 98193094 - Exonic hg38 SARC TCGA-DX-A3LS-01A 69 681 Out-of-frame Inter-chr q22.2 Seq+ 100940 ChimerSeq TCGA FAWG TCGA_RNA-Seq C12orf65-EIF4EBP1 C12orf65 chr12 123233531 + EIF4EBP1 chr8 38057081 + Exonic hg38 SARC TCGA-DX-A3LS-01A 90 332 5'UTR-CDS Inter-chr q24.31 p11.23 Seq+ 100941 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA6-LSM1 NCOA6 chr20 34768464 - LSM1 chr8 38172033 - Exonic hg38 SARC TCGA-DX-A3LS-01A 66 174 In-Frame Inter-chr q11.22 p11.23 Seq+ 100942 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMKK2-PMCH CAMKK2 chr12 121296638 - PMCH chr12 102197171 - Exonic hg38 SARC TCGA-DX-A3LS-01A 36 102 5'UTR-CDS Intra-chr q24.31 q23.2 Seq+ 100943 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNM2-ARHGEF25 PITPNM2 chr12 123149776 - ARHGEF25 chr12 57612930 + Exonic hg38 SARC TCGA-DX-A3LS-01A 3 168 5'UTR-CDS Intra-chr q24.31 q13.3 Seq+ 100944 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC4-LTA4H LRRC4 chr7 128028867 - LTA4H chr12 96018903 - Exonic hg38 SARC TCGA-DX-A3LS-01A 17 85 In-Frame Inter-chr q32.1 Tumor suppressor gene q23.1 Seq+ 100945 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLXIP-ASH2L MLXIP chr12 122079266 + ASH2L chr8 38138816 + Exonic hg38 SARC TCGA-DX-A3LS-01A 8 115 3'UTR-CDS Inter-chr Transcription factor p11.23 Seq+ 100946 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC4-AKR1B1 EXOC4 chr7 133253187 + AKR1B1 chr7 134451753 - Exonic hg38 SARC TCGA-DX-A3LS-01A 1 138 Out-of-frame Intra-chr q33 q33 Tumor suppressor gene 100947 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM2B-LRRIQ1 KDM2B chr12 121574547 - LRRIQ1 chr12 85244789 + Exonic hg38 SARC TCGA-DX-A3LS-01A 19 37 Out-of-frame Intra-chr q24.31 Transcription factor q21.31 Seq+ 100948 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLXIP-TSPAN8 MLXIP chr12 122079266 + TSPAN8 chr12 71282819 - Exonic hg38 SARC TCGA-DX-A3LS-01A 2 101 3'UTR-5'UTR Intra-chr Transcription factor q21.1 Seq+ 100949 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELK3-SBNO1 ELK3 chr12 96194705 + SBNO1 chr12 123350441 - Exonic hg38 SARC TCGA-DX-A3LS-01A 9 68 5'UTR-5'UTR Intra-chr q23.1 Transcription factor q24.31 Seq+ 100950 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN8-ASH2L TSPAN8 chr12 71282716 - ASH2L chr8 38138816 + Exonic hg38 SARC TCGA-DX-A3LS-01A 7 64 5'UTR-CDS Inter-chr q21.1 p11.23 Seq+ 100951 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCT2-KCNC2 CCT2 chr12 69586344 + KCNC2 chr12 75043813 - Exonic hg38 SARC TCGA-DX-A3LS-01A 9 49 Out-of-frame Intra-chr q15 q21.1 Seq+ 100952 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF71-HSPB8 ZNF71 chr19 56601591 + HSPB8 chr12 119187025 + Exonic hg38 SARC TCGA-DX-A3LS-01A 14 27 Out-of-frame Inter-chr q13.43 Transcription factor q24.23 Seq+ 100953 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC11-CDH18 HDAC11 chr3 13483564 + CDH18 chr5 19981178 - Exonic hg38 SARC TCGA-DX-A3LS-01A 10 41 CDS-5'UTR Inter-chr p25.1 p14.3 Seq+ 100954 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCRS1-SRRM4 MCRS1 chr12 49563001 - SRRM4 chr12 119156495 + Exonic hg38 SARC TCGA-DX-A3LS-01A 7 47 Out-of-frame Intra-chr q13.12 q24.23 Seq+ 100955 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPZ1-GNPTAB COPZ1 chr12 54325181 + GNPTAB chr12 101796762 - Exonic hg38 SARC TCGA-DX-A3LS-01A 15 8 In-Frame Intra-chr q13.13 q23.2 Seq+ 100956 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRHDE-C12orf75 TRHDE chr12 72286954 + C12orf75 chr12 105395632 + Exonic hg38 SARC TCGA-DX-A3LS-01A 11 23 CDS-3'UTR Intra-chr q21.1 q23.3 Seq+ 100957 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH2L-CASS4 ASH2L chr8 38133546 + CASS4 chr20 56445900 + Exonic hg38 SARC TCGA-DX-A3LS-01A 7 31 In-Frame Inter-chr p11.23 q13.31 Seq+ 100958 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB3-TMEM198B ERBB3 chr12 56088868 + TMEM198B chr12 55834851 + Exonic hg38 SARC TCGA-DX-A3LS-01A 6 32 CDS-5'UTR Intra-chr q13.2 Oncogene q13.2 Seq+ 100959 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLIPR1L1-RAB3IP GLIPR1L1 chr12 75334902 + RAB3IP chr12 69755384 + Exonic hg38 SARC TCGA-DX-A3LS-01A 9 11 Out-of-frame Intra-chr q21.2 q15 Seq+ 100960 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC16A-RXRA SEC16A chr9 136459134 - RXRA chr9 134401632 + Exonic hg38 SARC TCGA-DX-A3LS-01A 4 27 Out-of-frame Intra-chr q34.3 q34.2 Transcription factor Seq+ 100961 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOR2-NUP37 NCOR2 chr12 124419957 - NUP37 chr12 102118583 - Exonic hg38 SARC TCGA-DX-A3LS-01A 6 16 CDS-5'UTR Intra-chr q24.31 q23.2 Seq+ 100962 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPHOSPH9-ELK3 MPHOSPH9 chr12 123210056 - ELK3 chr12 96246940 + Exonic hg38 SARC TCGA-DX-A3LS-01A 6 14 In-Frame Intra-chr q24.31 q23.1 Transcription factor Seq+ 100963 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCCAT198-CPM KCCAT198 chr12 105326904 - CPM chr12 68871956 - Exonic hg38 SARC TCGA-DX-A3LS-01A 6 11 3'UTR-CDS Intra-chr q23.3 q15 100964 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGD5-SLC6A6 FGD5 chr3 14821596 + SLC6A6 chr3 14484867 + Exonic hg38 SARC TCGA-DX-A3LS-01A 3 22 Out-of-frame Intra-chr p25.1 p25.1 Seq+ 100965 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-SBNO1 FRS2 chr12 69470530 + SBNO1 chr12 123350441 - Exonic hg38 SARC TCGA-DX-A3LS-01A 2 24 5'UTR-5'UTR Intra-chr q15 q24.31 Seq+ 100966 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSFM-CPM TSFM chr12 57793073 + CPM chr12 68885889 - Exonic hg38 SARC TCGA-DX-A3LS-01A 4 16 In-Frame Intra-chr q14.1 q15 Seq+ 100967 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNPTAB-DRAM1 GNPTAB chr12 101830626 - DRAM1 chr12 101897863 + Exonic hg38 SARC TCGA-DX-A3LS-01A 4 13 Out-of-frame Intra-chr q23.2 q23.2 Seq+ 100968 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMSAP1-LCN8 CAMSAP1 chr9 135881633 - LCN8 chr9 136757168 - Exonic hg38 SARC TCGA-DX-A3LS-01A 3 15 In-Frame Intra-chr q34.3 q34.3 Seq+ 100969 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC4-ELK3 EXOC4 chr7 133253331 + ELK3 chr12 96247684 + Exonic hg38 SARC TCGA-DX-A3LS-01A 5 7 Out-of-frame Inter-chr q33 q23.1 Transcription factor 100970 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA5A-TGIF2 SEMA5A chr5 9545584 - TGIF2 chr20 36578741 + Exonic hg38 SARC TCGA-DX-A3LS-01A 3 15 5'UTR-5'UTR Inter-chr p15.31 q11.23 Transcription factor Seq+ 100971 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF71-MYRFL ZNF71 chr19 56601591 + MYRFL chr12 69855280 + Exonic hg38 SARC TCGA-DX-A3LS-01A 2 15 Out-of-frame Inter-chr q13.43 Transcription factor q15 Transcription factor Seq+ 100972 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF20-MROH8 PHF20 chr20 35927879 + MROH8 chr20 37172057 - Exonic hg38 SARC TCGA-DX-A3LS-01A 3 10 In-Frame Intra-chr q11.22 Transcription factor q11.23 Seq+ 100973 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHCHD3-CSMD1 CHCHD3 chr7 132885662 - CSMD1 chr8 3348161 - Exonic hg38 SARC TCGA-DX-A3LS-01A 2 13 Out-of-frame Inter-chr q33 Transcription factor p23.2 Tumor suppressor gene Seq+ 100974 ChimerSeq TCGA FAWG TCGA_RNA-Seq B3GNT4-TSPAN31 B3GNT4 chr12 122207812 + TSPAN31 chr12 57745745 + Exonic hg38 SARC TCGA-DX-A3LS-01A 1 16 3'UTR-CDS Intra-chr q24.31 q14.1 100975 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSPB8-MYRFL HSPB8 chr12 119193865 + MYRFL chr12 69855280 + Exonic hg38 SARC TCGA-DX-A3LS-01A 4 3 3'UTR-CDS Intra-chr q24.23 q15 Transcription factor Seq+ 100976 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAK1-FAM83C BAK1 chr6 33575298 - FAM83C chr20 35288958 - Exonic hg38 SARC TCGA-DX-A3LS-01A 2 10 Out-of-frame Inter-chr p21.31 q11.22 Seq+ 100977 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLIS3-TERT GLIS3 chr9 4117768 - TERT chr5 1282624 - Exonic hg38 SARC TCGA-DX-A3LS-01A 1 13 Out-of-frame Inter-chr p24.2 Transcription factor p15.33 Oncogene Seq+ 100978 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT5A-ARHGEF25 KMT5A chr12 123405074 + ARHGEF25 chr12 57614967 + Exonic hg38 SARC TCGA-DX-A3LS-01A 1 12 Out-of-frame Intra-chr q24.31 q13.3 100979 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANAPC5-LTA4H ANAPC5 chr12 121318277 - LTA4H chr12 96009148 - Exonic hg38 SARC TCGA-DX-A3LS-01A 1 10 Out-of-frame Intra-chr q24.31 q23.1 100980 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARMC12-ERGIC3 ARMC12 chr6 35738518 + ERGIC3 chr20 35555044 + Exonic hg38 SARC TCGA-DX-A3LS-01A 2 6 Out-of-frame Inter-chr p21.31 q11.22 Seq+ 100981 ChimerSeq TCGA FAWG TCGA_RNA-Seq INPP5E-GLT6D1 INPP5E chr9 136438608 - GLT6D1 chr9 135631478 - Exonic hg38 SARC TCGA-DX-A3LS-01A 1 8 In-Frame Intra-chr q34.3 q34.3 100982 ChimerSeq TCGA FAWG TCGA_RNA-Seq HVCN1-GOLGA3 HVCN1 chr12 110689726 - GOLGA3 chr12 132808549 - Exonic hg38 SARC TCGA-DX-A3LS-01A 2 2 5'UTR-CDS Intra-chr q24.11 q24.33 Seq+ 100983 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP10-EDNRA ARHGAP10 chr4 147966839 + EDNRA chr4 147519851 + Exonic hg38 SARC TCGA-DX-A3LS-01A 1 5 In-Frame Intra-chr q31.23 q31.22 Seq+ 100984 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2B1-EXOC4 ATP2B1 chr12 89655679 - EXOC4 chr7 134064291 + Exonic hg38 SARC TCGA-DX-A3LS-01A 1 3 Out-of-frame Inter-chr q21.33 q33 Seq+ 100985 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP85L-WASHC3 CEP85L chr6 118565529 - WASHC3 chr12 102061346 - Exonic hg38 SARC TCGA-DX-A3LS-01A 1000 1000 In-Frame Inter-chr q22.31 q23.2 100986 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC7-SRGAP1 HDAC7 chr12 47788045 - SRGAP1 chr12 64142295 + Exonic hg38 SARC TCGA-DX-A3LT-01A 104 673 In-Frame Intra-chr q13.11 q14.2 Seq+ 100987 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAR1-PQLC2L FAR1 chr11 13700492 + PQLC2L chr3 157553230 + Exonic hg38 SARC TCGA-DX-A3LT-01A 26 204 Out-of-frame Inter-chr p15.3 q25.32 100988 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARNTL-RIC8B ARNTL chr11 13360424 + RIC8B chr12 106825726 + Exonic hg38 SARC TCGA-DX-A3LT-01A 41 129 In-Frame Inter-chr p15.3 Tumor suppressor gene Transcription factor q23.3 Seq+ 100989 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAP1L1-PTPRR NAP1L1 chr12 76084567 - PTPRR chr12 70764778 - Exonic hg38 SARC TCGA-DX-A3LT-01A 29 86 5'UTR-CDS Intra-chr q21.2 q15 Seq+ 100990 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDLRAD3-MOB2 LDLRAD3 chr11 35944144 + MOB2 chr11 1480885 - Exonic hg38 SARC TCGA-DX-A3LT-01A 9 103 Out-of-frame Intra-chr p13 p15.5 Seq+ 100991 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC13-MGAT4C ZDHHC13 chr11 19152684 + MGAT4C chr12 85989552 - Exonic hg38 SARC TCGA-DX-A3LT-01A 3 56 In-Frame Inter-chr p15.1 Seq+ 100992 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRR-SLC6A15 PTPRR chr12 70754191 - SLC6A15 chr12 84892308 - Exonic hg38 SARC TCGA-DX-A3LT-01A 4 50 CDS-5'UTR Intra-chr q15 q21.31 Seq+ 100993 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC6A15-MYRFL SLC6A15 chr12 84912523 - MYRFL chr12 69903644 + Exonic hg38 SARC TCGA-DX-A3LT-01A 4 23 5'UTR-CDS Intra-chr q21.31 q15 Transcription factor Seq+ 100994 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOB2-KIAA1549L MOB2 chr11 1480393 - KIAA1549L chr11 33645686 + Exonic hg38 SARC TCGA-DX-A3LT-01A 4 10 Out-of-frame Intra-chr p15.5 p13 Seq+ 100995 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNRF3-FAM19A5 ZNRF3 chr22 28987201 + FAM19A5 chr22 48646597 + Exonic hg38 SARC TCGA-DX-A3LT-01A 2 10 Out-of-frame Intra-chr q12.1 q13.32 Seq+ 100996 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIWIL4-THRSP PIWIL4 chr11 94577492 + THRSP chr11 78067659 + Exonic hg38 SARC TCGA-DX-A3LT-01A 1 12 CDS-3'UTR Intra-chr q21 q14.1 Seq+ 100997 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARCH9-YEATS4 2019_ 3_ 9_ chr12 57757084 + YEATS4 chr12 69362788 + Exonic hg38 SARC TCGA-DX-A3LT-01A 1 11 Out-of-frame Intra-chr q14.1 q15 Seq+ 100998 ChimerSeq TCGA FAWG TCGA_RNA-Seq OASL-NUPL2 OASL chr12 121038774 - NUPL2 chr7 23199458 + Exonic hg38 SARC TCGA-DX-A3LT-01A 1 1 Out-of-frame Inter-chr q24.31 p15.3 100999 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC17-NCR2 ZDHHC17 chr12 76764329 + NCR2 chr6 41335831 + Exonic hg38 SARC TCGA-DX-A3LU-01A 49 245 CDS-5'UTR Inter-chr q21.2 p21.1 Seq+ 101000 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF318-CD2AP ZNF318 chr6 43368967 - CD2AP chr6 47580864 + Exonic hg38 SARC TCGA-DX-A3LU-01A 40 112 In-Frame Intra-chr p21.1 Transcription factor p12.3 Seq+ 101001 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX15-CCND3 DHX15 chr4 24541873 - CCND3 chr6 41940585 - Exonic hg38 SARC TCGA-DX-A3LU-01A 1 12 5'UTR-5'UTR Inter-chr p15.2 p21.1 101002 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP49-DAAM2 USP49 chr6 41798875 - DAAM2 chr6 39883962 + Exonic hg38 SARC TCGA-DX-A3LU-01A 2 4 In-Frame Intra-chr p21.1 p21.2 Seq+ 101003 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBR2-BYSL UBR2 chr6 42652645 + BYSL chr6 41927374 + Exonic hg38 SARC TCGA-DX-A3LU-01A 1 5 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 101004 ChimerSeq TCGA FAWG TCGA_RNA-Seq BLOC1S1-CPM BLOC1S1 chr12 55717005 + CPM chr12 68885889 - Exonic hg38 SARC TCGA-DX-A3LW-01A 5 45 Out-of-frame Intra-chr q13.2 q15 Seq+ 101005 ChimerSeq TCGA FAWG TCGA_RNA-Seq FIGNL2-SMIM20 FIGNL2 chr12 51848540 - SMIM20 chr4 25928313 + Exonic hg38 SARC TCGA-DX-A3LW-01A 9 29 5'UTR-CDS Inter-chr q13.13 p15.2 101006 ChimerSeq TCGA FAWG TCGA_RNA-Seq OR10AE3P-CD63 OR10AE3P chr12 55646614 - CD63 chr12 55729072 - Exonic hg38 SARC TCGA-DX-A3LW-01A 11 3 Out-of-frame Intra-chr q13.2 Seq+ 101007 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM39-CRYZL1 RBM39 chr20 35716740 - CRYZL1 chr21 33603537 - Exonic hg38 SARC TCGA-DX-A3LW-01A 1 25 Out-of-frame Inter-chr q11.22 q22.11 Seq+ 101008 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK2-PAN2 CDK2 chr12 55969576 + PAN2 chr12 56325454 - Exonic hg38 SARC TCGA-DX-A3LW-01A 2 9 In-Frame Intra-chr q13.2 CMGC:CDK Tumor suppressor gene q13.3 Seq+ 101009 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPSAP52-TSPAN8 RPSAP52 chr12 65826843 - TSPAN8 chr12 71157787 - Exonic hg38 SARC TCGA-DX-A3LW-01A 1 10 3'UTR-5'UTR Intra-chr q14.3 q21.1 101010 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT2-ANO6 CNOT2 chr12 70311017 + ANO6 chr12 45367688 + Exonic hg38 SARC TCGA-DX-A3LW-01A 3 1 Out-of-frame Intra-chr q15 q12 101011 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP15-CNOT2 USP15 chr12 62349307 + CNOT2 chr12 70353829 + Exonic hg38 SARC TCGA-DX-A3LW-01A 1 7 Out-of-frame Intra-chr q14.1 q15 101012 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEL1L3-COQ10A SEL1L3 chr4 25802283 - COQ10A chr12 56267794 + Exonic hg38 SARC TCGA-DX-A3LW-01A 1 1 Out-of-frame Inter-chr p15.2 q13.3 101013 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCTN2-SRGAP1 DCTN2 chr12 57547028 - SRGAP1 chr12 63983947 + Exonic hg38 SARC TCGA-DX-A3LY-01B 129 1017 Out-of-frame Intra-chr q13.3 q14.2 Seq+ 101014 ChimerSeq TCGA FAWG TCGA_RNA-Seq PA2G4-MARK1 PA2G4 chr12 56104825 + MARK1 chr1 220579354 + Exonic hg38 SARC TCGA-DX-A3LY-01B 11 40 Out-of-frame Inter-chr q13.2 Transcription factor q41 CAMK:CAMKL Oncogene Seq+ 101015 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD55-RGS21 CD55 chr1 207339417 + RGS21 chr1 192365921 + Exonic hg38 SARC TCGA-DX-A3LY-01B 9 41 Out-of-frame Intra-chr q32.2 q31.2 Seq+ 101016 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX46-TPO DDX46 chr5 134777725 + TPO chr2 1542421 + Exonic hg38 SARC TCGA-DX-A3LY-01B 7 40 CDS-3'UTR Inter-chr q31.1 Seq+ 101017 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAA10-TBC1D30 NAA10 chrX 153934884 - TBC1D30 chr12 64864668 + Exonic hg38 SARC TCGA-DX-A3LY-01B 2 24 In-Frame Inter-chr q28 q14.3 Seq+ 101018 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP4-TBC1D30 ARHGAP4 chrX 153934884 - TBC1D30 chr12 64864668 + Exonic hg38 SARC TCGA-DX-A3LY-01B 2 21 5'UTR-CDS Inter-chr q28 q14.3 Seq+ 101019 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK40-OSCP1 STK40 chr1 36385723 - OSCP1 chr1 36438910 - Exonic hg38 SARC TCGA-DX-A3LY-01B 4 12 5'UTR-CDS Intra-chr p34.3 p34.3 Tumor suppressor gene Seq+ 101020 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK2-ERBB3 CDK2 chr12 55967124 + ERBB3 chr12 56086531 + Exonic hg38 SARC TCGA-DX-A3LY-01B 4 9 Out-of-frame Intra-chr q13.2 CMGC:CDK Tumor suppressor gene q13.2 Oncogene Seq+ 101021 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGKD-NDUFA10 DGKD chr2 233390483 + NDUFA10 chr2 240022340 - Exonic hg38 SARC TCGA-DX-A3LY-01B 2 17 In-Frame Intra-chr Seq+ 101022 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP12-NXF3 USP12 chr13 27089883 - NXF3 chrX 103084495 - Exonic hg38 SARC TCGA-DX-A3LY-01B 3 10 In-Frame Inter-chr q12.13 Tumor suppressor gene q22.1 Seq+ 101023 ChimerSeq TCGA FAWG TCGA_RNA-Seq TYK2-CIB3 TYK2 chr19 10378214 - CIB3 chr19 16164913 - Exonic hg38 SARC TCGA-DX-A3LY-01B 5 1 In-Frame Intra-chr p13.2 TK:JakA p13.11 Seq+ 101024 ChimerSeq TCGA FAWG TCGA_RNA-Seq NTRK1-DYNC2H1 NTRK1 chr1 156880157 + DYNC2H1 chr11 103435943 + Exonic hg38 SARC TCGA-DX-A3LY-01B 1 10 In-Frame Inter-chr q23.1 Oncogene q22.3 Seq+ 101025 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDX-ERICH1 HDX chrX 84502342 - ERICH1 chr8 664676 - Exonic hg38 SARC TCGA-DX-A3LY-01B 2 5 5'UTR-CDS Inter-chr q21.1 Transcription factor Seq+ 101026 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL8-ZDHHC17 OSBPL8 chr12 76559397 - ZDHHC17 chr12 76805317 + Exonic hg38 SARC TCGA-DX-A3LY-01B 1 9 5'UTR-CDS Intra-chr q21.2 q21.2 Seq+ 101027 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM2-LRIG3 R3HDM2 chr12 57395749 - LRIG3 chr12 58890796 - Exonic hg38 SARC TCGA-DX-A3LY-01B 1 8 5'UTR-CDS Intra-chr q13.3 q14.1 Tumor suppressor gene 101028 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTNB-EXOC4 DTNB chr2 25673386 - EXOC4 chr7 133475328 + Exonic hg38 SARC TCGA-DX-A3LY-01B 2 3 5'UTR-CDS Inter-chr p23.3 q33 Seq+ 101029 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTGS2-GLRX2 PTGS2 chr1 186680239 - GLRX2 chr1 193101204 - Exonic hg38 SARC TCGA-DX-A3LY-01B 1 3 Out-of-frame Intra-chr q31.1 Oncogene q31.2 101030 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDM2-SYK MDM2 chr12 68809292 + SYK chr9 90895528 + Exonic hg38 SARC TCGA-DX-A3M1-01A 235 998 Out-of-frame Inter-chr q15 Oncogene q22.2 TK:Syk Oncogene Tumor suppressor gene Seq+ 101031 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRAT-IT1 CRAT chr9 129097250 - IT1 chr9 121885575 - Exonic hg38 SARC TCGA-DX-A3M1-01A 194 506 Out-of-frame Intra-chr q34.11 101032 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSP2-AUH CTDSP2 chr12 57846372 - AUH chr9 91214425 - Exonic hg38 SARC TCGA-DX-A3M1-01A 150 442 Out-of-frame Inter-chr q14.1 q22.31 Seq+ 101033 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-CFAP54 FRS2 chr12 69470530 + CFAP54 chr12 96704743 + Exonic hg38 SARC TCGA-DX-A3M1-01A 37 492 5'UTR-CDS Intra-chr q15 q23.1 101034 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPOT-LYZ XPOT chr12 64445131 + LYZ chr12 69350108 + Exonic hg38 SARC TCGA-DX-A3M1-01A 27 262 Out-of-frame Intra-chr q14.2 q15 Seq+ 101035 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST6GALNAC6-NUP107 ST6GALNAC6 chr9 127887484 - NUP107 chr12 68741813 + Exonic hg38 SARC TCGA-DX-A3M1-01A 4 344 Out-of-frame Inter-chr q34.11 q15 Seq+ 101036 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEDD1-TMTC2 NEDD1 chr12 96937393 + TMTC2 chr12 82965024 + Exonic hg38 SARC TCGA-DX-A3M1-01A 34 183 Out-of-frame Intra-chr q23.1 q21.31 Seq+ 101037 ChimerSeq TCGA FAWG TCGA_RNA-Seq NTN4-NUP107 NTN4 chr12 95737866 - NUP107 chr12 68741813 + Exonic hg38 SARC TCGA-DX-A3M1-01A 22 104 In-Frame Intra-chr q22 q15 Seq+ 101038 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRAT-TTLL11 CRAT chr9 129097250 - TTLL11 chr9 121870748 - Exonic hg38 SARC TCGA-DX-A3M1-01A 19 62 Out-of-frame Intra-chr q34.11 q33.2 Seq+ 101039 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPQ-MATN2 CPQ chr8 96785330 + MATN2 chr8 97930953 + Exonic hg38 SARC TCGA-DX-A3M1-01A 19 59 In-Frame Intra-chr q22.1 q22.1 Seq+ 101040 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC2-CASC17 TANC2 chr17 63151380 + CASC17 chr17 71185655 - Exonic hg38 SARC TCGA-DX-A3M1-01A 16 54 CDS-3'UTR Intra-chr q23.2 q24.3 Seq+ 101041 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPRIP-TNFRSF13B MPRIP chr17 17042971 + TNFRSF13B chr17 16952583 - Exonic hg38 SARC TCGA-DX-A3M1-01A 10 75 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 101042 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGA2-NR2C1 HMGA2 chr12 65838569 + NR2C1 chr12 95067391 - Exonic hg38 SARC TCGA-DX-A3M1-01A 20 31 CDS-5'UTR Intra-chr q14.3 Transcription factor q22 Transcription factor Seq+ 101043 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-HMGA2 FRS2 chr12 69470530 + HMGA2 chr12 65838519 + Exonic hg38 SARC TCGA-DX-A3M1-01A 12 34 5'UTR-CDS Intra-chr q15 q14.3 Transcription factor Seq+ 101044 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASC3-HNF1B CASC3 chr17 40141607 + HNF1B chr17 37687392 - Exonic hg38 SARC TCGA-DX-A3M1-01A 8 45 CDS-5'UTR Intra-chr q21.1 q12 Transcription factor Seq+ 101045 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFA12-ST6GALNAC6 NDUFA12 chr12 94994170 - ST6GALNAC6 chr9 127896332 - Exonic hg38 SARC TCGA-DX-A3M1-01A 6 53 In-Frame Inter-chr q22 q34.11 Seq+ 101046 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTCH1-GAS1RR PTCH1 chr9 95476034 - GAS1RR chr9 86981770 + Exonic hg38 SARC TCGA-DX-A3M1-01A 10 29 CDS-5'UTR Intra-chr q22.32 Oncogene Tumor suppressor gene q21.33 101047 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM129B-C16orf62 FAM129B chr9 127523679 - C16orf62 chr16 19691353 + Exonic hg38 SARC TCGA-DX-A3M1-01A 8 36 Out-of-frame Inter-chr q34.11 p12.3 Seq+ 101048 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA2-UQCRB LAMA2 chr6 129369990 + UQCRB chr8 96233227 - Exonic hg38 SARC TCGA-DX-A3M1-01A 3 48 Out-of-frame Inter-chr q22.33 q22.1 Seq+ 101049 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13B-STAU2 VPS13B chr8 99038566 + STAU2 chr8 73422702 - Exonic hg38 SARC TCGA-DX-A3M1-01A 2 46 In-Frame Intra-chr q22.2 q21.11 Seq+ 101050 ChimerSeq TCGA FAWG TCGA_RNA-Seq VEZT-C12orf29 VEZT chr12 95252071 + C12orf29 chr12 88040148 + Exonic hg38 SARC TCGA-DX-A3M1-01A 3 40 In-Frame Intra-chr q22 Tumor suppressor gene q21.32 Seq+ 101051 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP290-VEZT CEP290 chr12 88092681 - VEZT chr12 95251940 + Exonic hg38 SARC TCGA-DX-A3M1-01A 6 27 Out-of-frame Intra-chr q21.32 q22 Tumor suppressor gene Seq+ 101052 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIN7A-RPSAP52 LIN7A chr12 80889251 - RPSAP52 chr12 65759031 - Exonic hg38 SARC TCGA-DX-A3M1-01A 8 18 3'UTR-3'UTR Intra-chr q21.31 q14.3 Seq+ 101053 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWP1-UTP23 WWP1 chr8 86431743 + UTP23 chr8 116848888 + Exonic hg38 SARC TCGA-DX-A3M1-01A 3 37 CDS-3'UTR Intra-chr q21.3 q24.11 Seq+ 101054 ChimerSeq TCGA FAWG TCGA_RNA-Seq EDA-TEX11 EDA chrX 69616704 + TEX11 chrX 70873307 - Exonic hg38 SARC TCGA-DX-A3M1-01A 3 31 In-Frame Intra-chr q13.1 q13.1 Seq+ 101055 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNFRSF13B-MPRIP TNFRSF13B chr17 16948738 - MPRIP chr17 17057636 + Exonic hg38 SARC TCGA-DX-A3M1-01A 2 35 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 101056 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS53-TXNDC17 VPS53 chr17 655838 - TXNDC17 chr17 6641753 + Exonic hg38 SARC TCGA-DX-A3M1-01A 7 10 5'UTR-CDS Intra-chr Tumor suppressor gene p13.1 Seq+ 101057 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST6GALNAC6-PAWR ST6GALNAC6 chr9 127894512 - PAWR chr12 79596658 - Exonic hg38 SARC TCGA-DX-A3M1-01A 4 19 Out-of-frame Inter-chr q34.11 q21.2 Tumor suppressor gene Seq+ 101058 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC28-TEF TTC28 chr22 28096190 - TEF chr22 41398839 + Exonic hg38 SARC TCGA-DX-A3M1-01A 4 19 CDS-3'UTR Intra-chr q12.1 q13.2 Transcription factor Seq+ 101059 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKA2-HEATR6 SKA2 chr17 59154956 - HEATR6 chr17 60060096 - Exonic hg38 SARC TCGA-DX-A3M1-01A 1 26 Out-of-frame Intra-chr q22 q23.1 Seq+ 101060 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZHX2-GPRC6A ZHX2 chr8 122781946 + GPRC6A chr6 116828956 - Exonic hg38 SARC TCGA-DX-A3M1-01A 3 17 5'UTR-CDS Inter-chr q24.13 Tumor suppressor gene Transcription factor q22.1 Seq+ 101061 ChimerSeq TCGA FAWG TCGA_RNA-Seq NTN4-TRHDE NTN4 chr12 95710441 - TRHDE chr12 72286681 + Exonic hg38 SARC TCGA-DX-A3M1-01A 4 12 Out-of-frame Intra-chr q22 q21.1 Seq+ 101062 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL42-NTN4 MRPL42 chr12 93467554 + NTN4 chr12 95738144 - Exonic hg38 SARC TCGA-DX-A3M1-01A 5 5 5'UTR-CDS Intra-chr q22 q22 Seq+ 101063 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFB9-CSMD3 NDUFB9 chr8 124543279 + CSMD3 chr8 113314793 - Exonic hg38 SARC TCGA-DX-A3M1-01A 4 8 Out-of-frame Intra-chr q24.13 q23.3 Oncogene Seq+ 101064 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCA9-CEP112 ABCA9 chr17 69024214 - CEP112 chr17 65689218 - Exonic hg38 SARC TCGA-DX-A3M1-01A 3 9 Out-of-frame Intra-chr q24.2 q24.1 Seq+ 101065 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCTN2-SYT1 DCTN2 chr12 57547028 - SYT1 chr12 79353502 + Exonic hg38 SARC TCGA-DX-A3M1-01A 1 17 In-Frame Intra-chr q13.3 q21.2 101066 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMTC3-SLC35E3 TMTC3 chr12 88142487 + SLC35E3 chr12 68759157 + Exonic hg38 SARC TCGA-DX-A3M1-01A 2 13 5'UTR-5'UTR Intra-chr q21.32 q15 Seq+ 101067 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMTC2-BTBD11 TMTC2 chr12 82896646 + BTBD11 chr12 107635285 + Exonic hg38 SARC TCGA-DX-A3M1-01A 2 12 Out-of-frame Intra-chr q21.31 q23.3 Seq+ 101068 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMTC3-SLC6A15 TMTC3 chr12 88142487 + SLC6A15 chr12 84892308 - Exonic hg38 SARC TCGA-DX-A3M1-01A 1 10 5'UTR-5'UTR Intra-chr q21.32 q21.31 Seq+ 101069 ChimerSeq TCGA FAWG TCGA_RNA-Seq C12orf56-APPL2 C12orf56 chr12 64390314 - APPL2 chr12 105199531 - Exonic hg38 SARC TCGA-DX-A3M1-01A 2 5 Out-of-frame Intra-chr q14.2 q23.3 Seq+ 101070 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP126-SHANK2 CEP126 chr11 101948142 + SHANK2 chr11 71224796 - Exonic hg38 SARC TCGA-DX-A3M1-01A 1 9 5'UTR-5'UTR Intra-chr q22.1 q13.4 101071 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D15-MARS TBC1D15 chr12 71880607 + MARS chr12 57487937 + Exonic hg38 SARC TCGA-DX-A3M1-01A 1 9 5'UTR-5'UTR Intra-chr q21.1 q13.3 101072 ChimerSeq TCGA FAWG TCGA_RNA-Seq AUH-CPM AUH chr9 91296021 - CPM chr12 68871956 - Exonic hg38 SARC TCGA-DX-A3M1-01A 2 4 Out-of-frame Inter-chr q22.31 q15 Seq+ 101073 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPD-TMEM132E CPD chr17 30385236 + TMEM132E chr17 34626127 + Exonic hg38 SARC TCGA-DX-A3M1-01A 1 7 In-Frame Intra-chr q11.2 Tumor suppressor gene q12 Seq+ 101074 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAT5B-TENM4 STAT5B chr17 42216014 - TENM4 chr11 79215909 - Exonic hg38 SARC TCGA-DX-A3M1-01A 1 7 CDS-5'UTR Inter-chr q21.2 Transcription factor q14.1 101075 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTLL11-C12orf42 TTLL11 chr9 121860337 - C12orf42 chr12 103263371 - Exonic hg38 SARC TCGA-DX-A3M1-01A 2 3 CDS-3'UTR Inter-chr q33.2 q23.2 Seq+ 101076 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF292-MAP3K4 ZNF292 chr6 87155759 + MAP3K4 chr6 161070608 + Exonic hg38 SARC TCGA-DX-A3M1-01A 1 7 In-Frame Intra-chr q14.3 Tumor suppressor gene Transcription factor q26 STE:STE11 Tumor suppressor gene Seq+ 101077 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUNX1T1-E2F5 RUNX1T1 chr8 92102857 - E2F5 chr8 85202147 + Exonic hg38 SARC TCGA-DX-A3M1-01A 1 5 Out-of-frame Intra-chr q21.3 Oncogene q21.2 Transcription factor Seq+ 101078 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRWD3-RNF19A BRWD3 chrX 80791854 - RNF19A chr8 100313372 - Exonic hg38 SARC TCGA-DX-A3M1-01A 1 4 CDS-5'UTR Inter-chr q21.1 q22.2 101079 ChimerSeq TCGA FAWG TCGA_RNA-Seq THRB-SLC6A1 THRB chr3 24494687 - SLC6A1 chr3 11015672 + Exonic hg38 SARC TCGA-DX-A3M1-01A 1 4 5'UTR-5'UTR Intra-chr p24.2 Tumor suppressor gene Transcription factor p25.3 101080 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPOT-UTP20 XPOT chr12 64439315 + UTP20 chr12 101327081 + Exonic hg38 SARC TCGA-DX-A3M1-01A 1 1 Out-of-frame Intra-chr q14.2 q23.2 101081 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-ASIC2 NF1 chr17 31233213 + ASIC2 chr17 33112067 - Exonic hg38 SARC TCGA-DX-A3M1-01A 1000 1000 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q12 KB 101082 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRAMP1-TMEM204 CRAMP1 chr16 1626166 + TMEM204 chr16 1554782 + Exonic hg38 SARC TCGA-DX-A3M2-01A 12 20 Out-of-frame Intra-chr p13.3 p13.3 101083 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRIP1-TMLHE NRIP1 chr21 15014344 - TMLHE chrX 155492495 - Exonic hg38 SARC TCGA-DX-A3M2-01A 12 9 5'UTR-CDS Inter-chr q21.1 q28 Seq+ 101084 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN11-OAS1 PTPN11 chr12 112450512 + OAS1 chr12 112916509 + Exonic hg38 SARC TCGA-DX-A3U5-01A 139 823 Out-of-frame Intra-chr q24.13 Oncogene Tumor suppressor gene q24.13 Seq+ 101085 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXNC1-TXNRD1 PLXNC1 chr12 94282401 + TXNRD1 chr12 104348353 + Exonic hg38 SARC TCGA-DX-A3U5-01A 79 351 In-Frame Intra-chr q22 Tumor suppressor gene q23.3 Seq+ 101086 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF4G3-SPSB1 EIF4G3 chr1 21050866 - SPSB1 chr1 9369273 + Exonic hg38 SARC TCGA-DX-A3U5-01A 38 316 5'UTR-3'UTR Intra-chr p36.12 p36.22 Seq+ 101087 ChimerSeq TCGA FAWG TCGA_RNA-Seq TULP3-TEAD4 TULP3 chr12 2909580 + TEAD4 chr12 3011004 + Exonic hg38 SARC TCGA-DX-A3U5-01A 25 156 Out-of-frame Intra-chr p13.33 p13.33 Transcription factor Seq+ 101088 ChimerSeq TCGA FAWG TCGA_RNA-Seq LTA4H-BTBD11 LTA4H chr12 96002960 - BTBD11 chr12 107520487 + Exonic hg38 SARC TCGA-DX-A3U5-01A 19 98 Out-of-frame Intra-chr q23.1 q23.3 Seq+ 101089 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSRP2-SNRPF CSRP2 chr12 76878938 - SNRPF chr12 95861168 + Exonic hg38 SARC TCGA-DX-A3U5-01A 5 146 3'UTR-CDS Intra-chr q21.2 q23.1 Seq+ 101090 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-SBF2 FRS2 chr12 69537983 + SBF2 chr11 9795957 - Exonic hg38 SARC TCGA-DX-A3U5-01A 5 143 5'UTR-CDS Inter-chr q15 p15.4 Seq+ 101091 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMTC2-LYZ TMTC2 chr12 82986046 + LYZ chr12 69350108 + Exonic hg38 SARC TCGA-DX-A3U5-01A 14 93 Out-of-frame Intra-chr q21.31 q15 Seq+ 101092 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSF1-PRRC2C RSF1 chr11 77685105 - PRRC2C chr1 171566233 + Exonic hg38 SARC TCGA-DX-A3U5-01A 19 48 In-Frame Inter-chr q14.1 q24.3 Seq+ 101093 ChimerSeq TCGA FAWG TCGA_RNA-Seq SART3-PAH SART3 chr12 108547887 - PAH chr12 102894918 - Exonic hg38 SARC TCGA-DX-A3U5-01A 6 58 Out-of-frame Intra-chr q23.3 q23.2 Seq+ 101094 ChimerSeq TCGA FAWG TCGA_RNA-Seq HECTD4-LTA4H HECTD4 chr12 112381952 - LTA4H chr12 96006409 - Exonic hg38 SARC TCGA-DX-A3U5-01A 10 39 In-Frame Intra-chr q24.13 q23.1 Seq+ 101095 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRR-SNRPF PTPRR chr12 70920333 - SNRPF chr12 95861168 + Exonic hg38 SARC TCGA-DX-A3U5-01A 6 51 Out-of-frame Intra-chr q15 q23.1 Seq+ 101096 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD2-KIAA1109 BTBD2 chr19 1990004 - KIAA1109 chr4 122186036 + Exonic hg38 SARC TCGA-DX-A3U5-01A 11 22 In-Frame Inter-chr p13.3 q27 Seq+ 101097 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD11-CMKLR1 BTBD11 chr12 107581304 + CMKLR1 chr12 108293664 - Exonic hg38 SARC TCGA-DX-A3U5-01A 8 27 CDS-5'UTR Intra-chr q23.3 q23.3 Seq+ 101098 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2B1-DCDC2 ATP2B1 chr12 89709219 - DCDC2 chr6 24302044 - Exonic hg38 SARC TCGA-DX-A3U5-01A 3 25 5'UTR-CDS Inter-chr q21.33 p22.3 Tumor suppressor gene Seq+ 101099 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNL1-REPS1 GNL1 chr6 30552467 - REPS1 chr6 138921124 - Exonic hg38 SARC TCGA-DX-A3U5-01A 4 19 5'UTR-CDS Intra-chr q24.1 Seq+ 101100 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAV3-AVIL NAV3 chr12 77325214 + AVIL chr12 57816059 - Exonic hg38 SARC TCGA-DX-A3U5-01A 3 23 Out-of-frame Intra-chr q21.2 q14.1 101101 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRM1-CNOT2 GRM1 chr6 146399699 + CNOT2 chr12 70319298 + Exonic hg38 SARC TCGA-DX-A3U5-01A 6 5 Out-of-frame Inter-chr q24.3 q15 Seq+ 101102 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFA9-C12orf4 NDUFA9 chr12 4662635 + C12orf4 chr12 4491234 - Exonic hg38 SARC TCGA-DX-A3U5-01A 2 19 Out-of-frame Intra-chr p13.32 p13.32 Seq+ 101103 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1109-NFKB1 KIAA1109 chr4 122154112 + NFKB1 chr4 102525512 + Exonic hg38 SARC TCGA-DX-A3U5-01A 3 8 5'UTR-5'UTR Intra-chr q27 q24 Oncogene Tumor suppressor gene Transcription factor Seq+ 101104 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK1G2-PDE5A CSNK1G2 chr19 1969959 + PDE5A chr4 119607297 - Exonic hg38 SARC TCGA-DX-A3U5-01A 1 14 5'UTR-5'UTR Inter-chr p13.3 q26 Seq+ 101105 ChimerSeq TCGA FAWG TCGA_RNA-Seq HECTD4-BTBD11 HECTD4 chr12 112381952 - BTBD11 chr12 107520487 + Exonic hg38 SARC TCGA-DX-A3U5-01A 1 14 Out-of-frame Intra-chr q24.13 q23.3 101106 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE5A-NBAT1 PDE5A chr4 119596523 - NBAT1 chr6 22136669 - Exonic hg38 SARC TCGA-DX-A3U5-01A 1 13 3'UTR-3'UTR Inter-chr q26 p22.3 101107 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPN3-ATXN2 GPN3 chr12 110468156 - ATXN2 chr12 111555919 - Exonic hg38 SARC TCGA-DX-A3U5-01A 2 6 Out-of-frame Intra-chr q24.11 q24.12 Seq+ 101108 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHPRH-B4GALNT1 SHPRH chr6 145964157 - B4GALNT1 chr12 57632133 - Exonic hg38 SARC TCGA-DX-A3U5-01A 2 6 5'UTR-5'UTR Inter-chr q24.3 Tumor suppressor gene q13.3 Seq+ 101109 ChimerSeq TCGA FAWG TCGA_RNA-Seq C4orf32-ARHGEF38 C4orf32 chr4 112145733 + ARHGEF38 chr4 105706303 + Exonic hg38 SARC TCGA-DX-A3U5-01A 1 9 Out-of-frame Intra-chr q25 q24 101110 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAS2L3-PRDM1 GAS2L3 chr12 100618587 + PRDM1 chr6 106104825 + Exonic hg38 SARC TCGA-DX-A3U5-01A 1 9 Out-of-frame Inter-chr q23.1 q21 Oncogene Tumor suppressor gene Transcription factor 101111 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFT81-TSPAN8 IFT81 chr12 110136860 + TSPAN8 chr12 71282819 - Exonic hg38 SARC TCGA-DX-A3U5-01A 1 7 5'UTR-5'UTR Intra-chr q24.11 q21.1 Seq+ 101112 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAPSS1-GRID2 PAPSS1 chr4 107644802 - GRID2 chr4 93515216 + Exonic hg38 SARC TCGA-DX-A3U5-01A 1 2 Out-of-frame Intra-chr q25 q22.1 101113 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSRP2-PTPRR CSRP2 chr12 76878938 - PTPRR chr12 70920567 - Exonic hg38 SARC TCGA-DX-A3U5-01A 1000 1000 3'UTR-5'UTR Intra-chr q21.2 q15 101114 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM2-TPH2 R3HDM2 chr12 57395749 - TPH2 chr12 71972519 + Exonic hg38 SARC TCGA-DX-A3U6-01A 15 62 5'UTR-CDS Intra-chr q13.3 q21.1 Seq+ 101115 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNTN2-PKP1 CNTN2 chr1 205053255 + PKP1 chr1 201293942 + Exonic hg38 SARC TCGA-DX-A3U6-01A 1 91 In-Frame Intra-chr q32.1 q32.1 Seq+ 101116 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYRK2-CNTN2 DYRK2 chr12 67649945 + CNTN2 chr1 205053100 + Exonic hg38 SARC TCGA-DX-A3U6-01A 7 44 CDS-5'UTR Inter-chr q15 CMGC:DYRK q32.1 Seq+ 101117 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP1-CAND1 LRP1 chr12 57202537 + CAND1 chr12 67292622 + Exonic hg38 SARC TCGA-DX-A3U6-01A 10 32 Out-of-frame Intra-chr q13.3 q14.3 Seq+ 101118 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM3-TPH2 DNM3 chr1 172253682 + TPH2 chr12 71994439 + Exonic hg38 SARC TCGA-DX-A3U6-01A 7 28 In-Frame Inter-chr q24.3 q21.1 Seq+ 101119 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP107-PAAF1 NUP107 chr12 68722152 + PAAF1 chr11 73909399 + Exonic hg38 SARC TCGA-DX-A3U6-01A 3 24 Out-of-frame Inter-chr q15 q13.4 Seq+ 101120 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSRB3-ACTR5 MSRB3 chr12 65369026 + ACTR5 chr20 38771559 + Exonic hg38 SARC TCGA-DX-A3U6-01A 2 15 Out-of-frame Inter-chr q14.3 q11.23 Seq+ 101121 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D32-RPF2 TBC1D32 chr6 121303617 - RPF2 chr6 111024183 + Exonic hg38 SARC TCGA-DX-A3U6-01A 3 7 Out-of-frame Intra-chr q22.31 q21 Seq+ 101122 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM2-MAMDC2 R3HDM2 chr12 57395749 - MAMDC2 chr9 70218337 + Exonic hg38 SARC TCGA-DX-A3U6-01A 2 3 5'UTR-3'UTR Inter-chr q13.3 q21.12 Seq+ 101123 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSRB3-ATP23 MSRB3 chr12 65369026 + ATP23 chr12 57951758 + Exonic hg38 SARC TCGA-DX-A3U6-01A 1 6 CDS-5'UTR Intra-chr q14.3 101124 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSRB3-CCDC57 MSRB3 chr12 65453825 + CCDC57 chr17 82101866 - Exonic hg38 SARC TCGA-DX-A3U6-01A 1 6 Out-of-frame Inter-chr q14.3 q25.3 101125 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROBO2-TNNT2 ROBO2 chr3 77040846 + TNNT2 chr1 201359663 - Exonic hg38 SARC TCGA-DX-A3U6-01A 1 4 Out-of-frame Inter-chr p12.3 q32.1 Seq+ 101126 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCTN2-CHRNA1 DCTN2 chr12 57547028 - CHRNA1 chr2 174754414 - Exonic hg38 SARC TCGA-DX-A3U6-01A 1 2 Out-of-frame Inter-chr q13.3 q31.1 101127 ChimerSeq TCGA FAWG TCGA_RNA-Seq PID1-MRPS6 PID1 chr2 229155818 - MRPS6 chr21 34125341 + Exonic hg38 SARC TCGA-DX-A3U7-01A 45 361 In-Frame Inter-chr q36.3 q22.11 Seq+ 101128 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP1-ATG4B AGAP1 chr2 235494849 + ATG4B chr2 241651010 + Exonic hg38 SARC TCGA-DX-A3U7-01A 4 24 In-Frame Intra-chr q37.2 q37.3 Seq+ 101129 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF793-ST3GAL6 ZNF793 chr19 37523454 + ST3GAL6 chr3 98820788 + Exonic hg38 SARC TCGA-DX-A3U7-01A 3 10 CDS-3'UTR Inter-chr q13.12 Transcription factor q12.1 Seq+ 101130 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK4-L3MBTL4 PAK4 chr19 39125919 + L3MBTL4 chr18 6356807 - Exonic hg38 SARC TCGA-DX-A3U7-01A 1 15 5'UTR-5'UTR Inter-chr q13.2 STE:STE20 p11.31 Tumor suppressor gene Transcription factor 101131 ChimerSeq TCGA FAWG TCGA_RNA-Seq UPF1-DDX49 UPF1 chr19 18850242 + DDX49 chr19 18920651 + Exonic hg38 SARC TCGA-DX-A3U7-01A 1000 1000 CDS-5'UTR Intra-chr p13.11 p13.11 101132 ChimerSeq TCGA FAWG TCGA_RNA-Seq UPF1-COPE UPF1 chr19 18850217 + COPE chr19 18913043 - Exonic hg38 SARC TCGA-DX-A3U7-01A 1000 1000 Out-of-frame Intra-chr p13.11 p13.11 101133 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC61A1-INPP4B SEC61A1 chr3 128068059 + INPP4B chr4 142028914 - Exonic hg38 SARC TCGA-DX-A3UA-01A 25 141 In-Frame Inter-chr q21.3 q31.21 Tumor suppressor gene Seq+ 101134 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPM3-NTRK1 TPM3 chr1 154170400 - NTRK1 chr1 156875520 + Exonic hg38 SARC TCGA-DX-A3UA-01A 12 113 In-Frame Intra-chr q21.3 q23.1 Oncogene KB Pub Seq+ 101135 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD7-ACAD11 SETD7 chr4 139517885 - ACAD11 chr3 132644896 - Exonic hg38 SARC TCGA-DX-A3UA-01A 10 24 In-Frame Inter-chr q31.1 q22.1 Seq+ 101136 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITSN1-HNRNPUL1 ITSN1 chr21 33755397 + HNRNPUL1 chr19 41302665 + Exonic hg38 SARC TCGA-DX-A3UA-01A 4 46 In-Frame Inter-chr q22.11 q13.2 Seq+ 101137 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACAD11-ABCE1 ACAD11 chr3 132641972 - ABCE1 chr4 145104386 + Exonic hg38 SARC TCGA-DX-A3UA-01A 6 27 CDS-5'UTR Inter-chr q22.1 q31.21 Seq+ 101138 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF283-CEACAMP3 ZNF283 chr19 43835592 + CEACAMP3 chr19 41602502 + Exonic hg38 SARC TCGA-DX-A3UA-01A 5 27 Out-of-frame Intra-chr q13.31 Transcription factor 101139 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP3CA-HMGXB3 PPP3CA chr4 101346739 - HMGXB3 chr5 150030741 + Exonic hg38 SARC TCGA-DX-A3UA-01A 1 6 Out-of-frame Inter-chr q24 q32 Seq+ 101140 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD63-COL1A2 CD63 chr12 55726700 - COL1A2 chr7 94425750 + Exonic hg38 SARC TCGA-DX-A3UA-01A 1 4 In-Frame Inter-chr q13.2 q21.3 101141 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIAM1-BACH1 TIAM1 chr21 31339243 - BACH1 chr21 29321221 + Exonic hg38 SARC TCGA-DX-A3UA-01A 1 2 5'UTR-5'UTR Intra-chr q22.11 q21.3 Transcription factor 101142 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KA3-KDM6A RPS6KA3 chrX 20266564 - KDM6A chrX 45107410 + Exonic hg38 SARC TCGA-DX-A3UC-01A 13 53 Out-of-frame Intra-chr p22.12 p11.3 Oncogene Tumor suppressor gene Seq+ 101143 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR62-LRFN3 WDR62 chr19 36083241 + LRFN3 chr19 35939410 + Exonic hg38 SARC TCGA-DX-A3UC-01A 1000 1000 CDS-5'UTR Intra-chr q13.12 q13.12 Seq+ 101144 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R3B-ERI1 PPP1R3B chr8 9150563 - ERI1 chr8 9099859 + Exonic hg38 SARC TCGA-DX-A3UF-01A 15 43 3'UTR-5'UTR Intra-chr p23.1 p23.1 Seq+ 101145 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2G2-MIR99AHG UBE2G2 chr21 44801706 - MIR99AHG chr21 16537379 + Exonic hg38 SARC TCGA-DX-A3UF-01A 14 41 5'UTR-5'UTR Intra-chr q22.3 q21.1 101146 ChimerSeq TCGA FAWG TCGA_RNA-Seq RB1-CLEC2B RB1 chr13 48307406 + CLEC2B chr12 9862573 - Exonic hg38 SARC TCGA-DX-A3UF-01A 9 38 CDS-5'UTR Inter-chr q14.2 Oncogene Tumor suppressor gene p13.31 Seq+ 101147 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM126B-COQ10B FAM126B chr2 201045496 - COQ10B chr2 197459932 + Exonic hg38 SARC TCGA-DX-A3UF-01A 2 23 5'UTR-5'UTR Intra-chr q33.1 q33.1 Seq+ 101148 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNG7-PAQR5 GNG7 chr19 2520608 - PAQR5 chr15 69399974 + Exonic hg38 SARC TCGA-DX-A3UF-01A 5 6 In-Frame Inter-chr p13.3 q23 Seq+ 101149 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPAR6-TM4SF1 LPAR6 chr13 48404181 - TM4SF1 chr3 149375769 - Exonic hg38 SARC TCGA-DX-A3UF-01A 1 16 3'UTR-CDS Inter-chr q14.2 q25.1 101150 ChimerSeq TCGA FAWG TCGA_RNA-Seq SORBS1-CYP2C8 SORBS1 chr10 95491035 - CYP2C8 chr10 95067691 - Exonic hg38 SARC TCGA-DX-A48J-01A 1 12 5'UTR-5'UTR Intra-chr q24.1 q23.33 101151 ChimerSeq TCGA FAWG TCGA_RNA-Seq NBEA-BRCA2 NBEA chr13 35196302 + BRCA2 chr13 32325076 + Exonic hg38 SARC TCGA-DX-A48J-01A 1 5 Out-of-frame Intra-chr q13.3 q13.1 Oncogene Tumor suppressor gene Seq+ 101152 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL4A1-FLNA COL4A1 chr13 110173900 - FLNA chrX 154350207 - Exonic hg38 SARC TCGA-DX-A48J-01A 1 4 In-Frame Inter-chr q34 q28 Tumor suppressor gene 101153 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRYL-AS2 FRYL chr4 48573186 - AS2 chr1 9681135 - Exonic hg38 SARC TCGA-DX-A48K-01A 9 57 Out-of-frame Inter-chr p11 101154 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAS7-USP12 GAS7 chr17 10198208 - USP12 chr13 27116596 - Exonic hg38 SARC TCGA-DX-A48K-01A 3 7 In-Frame Inter-chr p13.1 q12.13 Tumor suppressor gene 101155 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL4I1-P4HB IL4I1 chr19 49927694 - P4HB chr17 81847347 - Exonic hg38 SARC TCGA-DX-A48K-01A 1 8 5'UTR-CDS Inter-chr q13.33 q25.3 101156 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP62-P4HB NUP62 chr19 49927694 - P4HB chr17 81847347 - Exonic hg38 SARC TCGA-DX-A48K-01A 1 8 5'UTR-CDS Inter-chr q13.33 q25.3 101157 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF126-GNG7 RNF126 chr19 652233 - GNG7 chr19 2555188 - Exonic hg38 SARC TCGA-DX-A48K-01A 1 5 CDS-5'UTR Intra-chr p13.3 p13.3 101158 ChimerSeq TCGA FAWG TCGA_RNA-Seq WRAP53-PITPNA WRAP53 chr17 7689701 + PITPNA chr17 1518031 - Exonic hg38 SARC TCGA-DX-A48L-01A 3 14 CDS-3'UTR Intra-chr p13.1 p13.3 Seq+ 101159 ChimerSeq TCGA FAWG TCGA_RNA-Seq GGACT-INCA1 GGACT chr13 100583825 - INCA1 chr17 4990265 - Exonic hg38 SARC TCGA-DX-A48L-01A 1 20 5'UTR-CDS Inter-chr q32.3 p13.2 101160 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP14-NOL4 USP14 chr18 180339 + NOL4 chr18 33883424 - Exonic hg38 SARC TCGA-DX-A48L-01A 1 16 Out-of-frame Intra-chr p11.32 q12.1 Seq+ 101161 ChimerSeq TCGA FAWG TCGA_RNA-Seq C17orf49-STK39 C17orf49 chr17 7015156 + STK39 chr2 168161842 - Exonic hg38 SARC TCGA-DX-A48L-01A 3 5 In-Frame Inter-chr p13.1 q24.3 Seq+ 101162 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX33-KIF1C DHX33 chr17 5468571 - KIF1C chr17 5014743 + Exonic hg38 SARC TCGA-DX-A48L-01A 1 10 Out-of-frame Intra-chr p13.2 p13.2 101163 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL25-ATP2B1 METTL25 chr12 82399394 + ATP2B1 chr12 89611372 - Exonic hg38 SARC TCGA-DX-A48N-01A 80 458 In-Frame Intra-chr q21.31 q21.33 101164 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMTC2-GNA14 TMTC2 chr12 82896646 + GNA14 chr9 77529253 - Exonic hg38 SARC TCGA-DX-A48N-01A 44 356 In-Frame Inter-chr q21.31 q21.2 Seq+ 101165 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC35E3-ACAD10 SLC35E3 chr12 68746779 + ACAD10 chr12 111747049 + Exonic hg38 SARC TCGA-DX-A48N-01A 38 184 In-Frame Intra-chr q15 q24.12 101166 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSTF1-SMARCA4 OSTF1 chr9 75088726 + SMARCA4 chr19 11030730 + Exonic hg38 SARC TCGA-DX-A48N-01A 36 168 In-Frame Inter-chr q21.13 p13.2 Oncogene Tumor suppressor gene Seq+ 101167 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMTC1-YEATS4 TMTC1 chr12 29556857 - YEATS4 chr12 69390147 + Exonic hg38 SARC TCGA-DX-A48N-01A 16 75 Out-of-frame Intra-chr p11.22 q15 Seq+ 101168 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC59-CHST11 CCDC59 chr12 82358223 - CHST11 chr12 104756949 + Exonic hg38 SARC TCGA-DX-A48N-01A 11 87 Out-of-frame Intra-chr q21.31 q23.3 101169 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF493-TMBIM4 ZNF493 chr19 21413649 + TMBIM4 chr12 66153448 - Exonic hg38 SARC TCGA-DX-A48N-01A 8 61 5'UTR-CDS Inter-chr p12 Transcription factor q14.3 Seq+ 101170 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTAR1-PIP5K1B PTAR1 chr9 69732139 - PIP5K1B chr9 68888981 + Exonic hg38 SARC TCGA-DX-A48N-01A 10 41 In-Frame Intra-chr q21.12 q21.11 Seq+ 101171 ChimerSeq TCGA FAWG TCGA_RNA-Seq EDEM3-ZNF66 EDEM3 chr1 184734531 - ZNF66 chr19 20792512 + Exonic hg38 SARC TCGA-DX-A48N-01A 3 38 3'UTR-3'UTR Inter-chr q25.3 Transcription factor 101172 ChimerSeq TCGA FAWG TCGA_RNA-Seq UTRN-OSTF1 UTRN chr6 144730486 + OSTF1 chr9 75117504 + Exonic hg38 SARC TCGA-DX-A48N-01A 3 33 In-Frame Inter-chr q24.2 q21.13 Seq+ 101173 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT2-TMEM2 CNOT2 chr12 70311017 + TMEM2 chr9 71704803 - Exonic hg38 SARC TCGA-DX-A48N-01A 6 18 Out-of-frame Inter-chr q15 q21.13 101174 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM2-TRPM3 TMEM2 chr9 71768357 - TRPM3 chr9 70864511 - Exonic hg38 SARC TCGA-DX-A48N-01A 3 28 Out-of-frame Intra-chr q21.13 q21.13 101175 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIVEP2-MAP7 HIVEP2 chr6 142836935 - MAP7 chr6 136421799 - Exonic hg38 SARC TCGA-DX-A48N-01A 4 22 5'UTR-5'UTR Intra-chr q24.2 Transcription factor q23.3 Seq+ 101176 ChimerSeq TCGA FAWG TCGA_RNA-Seq SWT1-COLGALT2 SWT1 chr1 185231708 + COLGALT2 chr1 183978520 - Exonic hg38 SARC TCGA-DX-A48N-01A 2 30 In-Frame Intra-chr q25.3 q25.3 101177 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF2-DNM3 RNF2 chr1 185093276 + DNM3 chr1 171987656 + Exonic hg38 SARC TCGA-DX-A48N-01A 2 27 Out-of-frame Intra-chr q25.3 Oncogene q24.3 101178 ChimerSeq TCGA FAWG TCGA_RNA-Seq C12orf45-TXNRD1 C12orf45 chr12 104991848 + TXNRD1 chr12 104327515 + Exonic hg38 SARC TCGA-DX-A48N-01A 4 18 Out-of-frame Intra-chr q23.3 q23.3 101179 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM114A1-FRS2 FAM114A1 chr4 38891830 + FRS2 chr12 69530865 + Exonic hg38 SARC TCGA-DX-A48N-01A 3 19 5'UTR-5'UTR Inter-chr p14 q15 101180 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAV3-CHST11 NAV3 chr12 77831704 + CHST11 chr12 104601906 + Exonic hg38 SARC TCGA-DX-A48N-01A 1 27 Out-of-frame Intra-chr q21.2 q23.3 101181 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM2-HMCN1 TMEM2 chr9 71694509 - HMCN1 chr1 185909337 + Exonic hg38 SARC TCGA-DX-A48N-01A 4 11 Out-of-frame Inter-chr q21.13 q25.3 Seq+ 101182 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBQLN1-NAV3 UBQLN1 chr9 83707500 - NAV3 chr12 77998337 + Exonic hg38 SARC TCGA-DX-A48N-01A 4 10 Out-of-frame Inter-chr q21.32 q21.2 Seq+ 101183 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPC1-ATP23 GPC1 chr2 240436084 + ATP23 chr12 57945628 + Exonic hg38 SARC TCGA-DX-A48N-01A 2 17 CDS-5'UTR Inter-chr q37.3 101184 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC91-PTK2 CCDC91 chr12 28452654 + PTK2 chr8 140686694 - Exonic hg38 SARC TCGA-DX-A48N-01A 2 16 In-Frame Inter-chr p11.22 q24.3 Seq+ 101185 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF407-CYB5A ZNF407 chr18 74641122 + CYB5A chr18 74255775 - Exonic hg38 SARC TCGA-DX-A48N-01A 2 15 Out-of-frame Intra-chr q22.3 Transcription factor q22.3 Tumor suppressor gene Seq+ 101186 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUAK1-UHRF1BP1L NUAK1 chr12 106106405 - UHRF1BP1L chr12 100039789 - Exonic hg38 SARC TCGA-DX-A48N-01A 2 12 In-Frame Intra-chr q23.3 Tumor suppressor gene q23.1 Seq+ 101187 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAV3-RGL1 NAV3 chr12 78190219 + RGL1 chr1 183847566 + Exonic hg38 SARC TCGA-DX-A48N-01A 4 3 In-Frame Inter-chr q21.2 q25.3 101188 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM134C-KIAA0100 FAM134C chr17 42609086 - KIAA0100 chr17 28638094 - Exonic hg38 SARC TCGA-DX-A48N-01A 2 10 Out-of-frame Intra-chr q11.2 Seq+ 101189 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCA4-BRD4 SMARCA4 chr19 10961174 + BRD4 chr19 15257173 - Exonic hg38 SARC TCGA-DX-A48N-01A 4 2 5'UTR-CDS Intra-chr p13.2 Oncogene Tumor suppressor gene p13.12 Atypical:BRD 101190 ChimerSeq TCGA FAWG TCGA_RNA-Seq GABPB2-C12orf45 GABPB2 chr1 151070934 + C12orf45 chr12 104991712 + Exonic hg38 SARC TCGA-DX-A48N-01A 2 9 5'UTR-CDS Inter-chr q21.3 q23.3 101191 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIP5K1B-CTDSP2 PIP5K1B chr9 68876794 + CTDSP2 chr12 57829596 - Exonic hg38 SARC TCGA-DX-A48N-01A 1 13 Out-of-frame Inter-chr q21.11 q14.1 101192 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA5-UHRF1 PLEKHA5 chr12 19269885 + UHRF1 chr19 4941528 + Exonic hg38 SARC TCGA-DX-A48N-01A 1 12 In-Frame Inter-chr p12.3 p13.3 Seq+ 101193 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTLL5-TCP11L2 TTLL5 chr14 75752955 + TCP11L2 chr12 106340826 + Exonic hg38 SARC TCGA-DX-A48N-01A 2 5 In-Frame Inter-chr q24.3 q23.3 Seq+ 101194 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT2-PIP5K1B CNOT2 chr12 70243480 + PIP5K1B chr9 68863837 + Exonic hg38 SARC TCGA-DX-A48N-01A 2 3 5'UTR-CDS Inter-chr q15 q21.11 101195 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL3A1-VIM COL3A1 chr2 189008142 + VIM chr10 17236294 + Exonic hg38 SARC TCGA-DX-A48N-01A 1 7 Out-of-frame Inter-chr q32.2 p13 Tumor suppressor gene 101196 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENTPD5-TSHR ENTPD5 chr14 73986814 - TSHR chr14 81092531 + Exonic hg38 SARC TCGA-DX-A48N-01A 2 2 Out-of-frame Intra-chr q24.3 q31.1 Oncogene Seq+ 101197 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDM2-POLR3B MDM2 chr12 68836749 + POLR3B chr12 106427197 + Exonic hg38 SARC TCGA-DX-A48N-01A 1 6 In-Frame Intra-chr q15 Oncogene q23.3 101198 ChimerSeq TCGA FAWG TCGA_RNA-Seq C12orf45-TCP11L2 C12orf45 chr12 104996026 + TCP11L2 chr12 106311041 + Exonic hg38 SARC TCGA-DX-A48N-01A 1 3 3'UTR-5'UTR Intra-chr q23.3 q23.3 101199 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF2-PTPRR RNF2 chr1 185099962 + PTPRR chr12 70662605 - Exonic hg38 SARC TCGA-DX-A48N-01A 1 1 In-Frame Inter-chr q25.3 Oncogene q15 101200 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAIP2-SIL1 PAIP2 chr5 139341980 + SIL1 chr5 139051046 - Exonic hg38 SARC TCGA-DX-A48P-01A 22 174 5'UTR-CDS Intra-chr q31.2 Tumor suppressor gene q31.2 Seq+ 101201 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIL1-PAIP2 SIL1 chr5 139121035 - PAIP2 chr5 139363759 + Exonic hg38 SARC TCGA-DX-A48P-01A 2 13 CDS-5'UTR Intra-chr q31.2 q31.2 Tumor suppressor gene Seq+ 101202 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R12A-ZZEF1 PPP1R12A chr12 79820774 - ZZEF1 chr17 4117166 - Exonic hg38 SARC TCGA-DX-A48P-01A 2 1 In-Frame Inter-chr q21.31 p13.2 101203 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRK5-SUMF1 GRK5 chr10 119431527 + SUMF1 chr3 4068745 - Exonic hg38 SARC TCGA-DX-A48R-01A 4 20 CDS-3'UTR Inter-chr q26.11 p26.1 Seq+ 101204 ChimerSeq TCGA FAWG TCGA_RNA-Seq UHRF1-KDM4B UHRF1 chr19 4950996 + KDM4B chr19 5077367 + Exonic hg38 SARC TCGA-DX-A48R-01A 2 9 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 101205 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2K3-TVP23B MAP2K3 chr17 21300658 + TVP23B chr17 18797579 + Exonic hg38 SARC TCGA-DX-A48R-01A 1 5 In-Frame Intra-chr p11.2 STE:STE7 p11.2 101206 ChimerSeq TCGA FAWG TCGA_RNA-Seq PER1-CNTROB PER1 chr17 8145958 - CNTROB chr17 7949385 + Exonic hg38 SARC TCGA-DX-A48R-01A 1 3 In-Frame Intra-chr p13.1 Oncogene p13.1 101207 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC186-TECTB CCDC186 chr10 114163060 - TECTB chr10 112283735 + Exonic hg38 SARC TCGA-DX-A48R-01A 1000 1000 Out-of-frame Intra-chr q25.3 q25.2 101208 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIPOL1-TRIM38 MIPOL1 chr14 37422949 + TRIM38 chr6 25971869 + Exonic hg38 SARC TCGA-DX-A48U-01A 1 5 Out-of-frame Inter-chr q13.3 p22.2 101209 ChimerSeq TCGA FAWG TCGA_RNA-Seq COBLL1-FMNL2 COBLL1 chr2 164841156 - FMNL2 chr2 152521943 + Exonic hg38 SARC TCGA-DX-A6B8-01A 5 3 Out-of-frame Intra-chr q24.3 q23.3 Seq+ 101210 ChimerSeq TCGA FAWG TCGA_RNA-Seq UQCRFS1-VSTM2B UQCRFS1 chr19 29212905 - VSTM2B chr19 29563846 + Exonic hg38 SARC TCGA-DX-A6B9-01A 30 90 In-Frame Intra-chr q12 q12 Seq+ 101211 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOT1L-PSG11 DOT1L chr19 2164265 + PSG11 chr19 43019048 - Exonic hg38 SARC TCGA-DX-A6B9-01A 34 55 Out-of-frame Intra-chr p13.3 Oncogene Transcription factor q13.31 Seq+ 101212 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT9-C17orf97 SEPT9 chr17 77307197 + C17orf97 chr17 423480 + Exonic hg38 SARC TCGA-DX-A6B9-01A 3 21 Out-of-frame Intra-chr Seq+ 101213 ChimerSeq TCGA FAWG TCGA_RNA-Seq PYCR1-BRI3BP PYCR1 chr17 81936748 - BRI3BP chr12 125012534 + Exonic hg38 SARC TCGA-DX-A6B9-01A 2 11 Out-of-frame Inter-chr q25.3 q24.31 Seq+ 101214 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP1M1-PYCR1 AP1M1 chr19 16209177 + PYCR1 chr17 81936193 - Exonic hg38 SARC TCGA-DX-A6B9-01A 1 10 Out-of-frame Inter-chr p13.11 q25.3 Seq+ 101215 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHFR-ZNF565 CHFR chr12 132853431 - ZNF565 chr19 36195156 - Exonic hg38 SARC TCGA-DX-A6B9-01A 2 4 Out-of-frame Inter-chr q24.33 Tumor suppressor gene q13.12 Transcription factor Seq+ 101216 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTCH1-TPM1 PTCH1 chr9 95461856 - TPM1 chr15 63056985 + Exonic hg38 SARC TCGA-DX-A6B9-01A 1 1 In-Frame Inter-chr q22.32 Oncogene Tumor suppressor gene q22.2 101217 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAP1L1-OSTF1 NAP1L1 chr12 76074203 - OSTF1 chr9 75137538 + Exonic hg38 SARC TCGA-DX-A6BE-01A 44 980 Out-of-frame Inter-chr q21.2 q21.13 Seq+ 101218 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCSK5-RAB3IP PCSK5 chr9 75891373 + RAB3IP chr12 69784720 + Exonic hg38 SARC TCGA-DX-A6BE-01A 79 198 In-Frame Inter-chr q21.13 q15 Seq+ 101219 ChimerSeq TCGA FAWG TCGA_RNA-Seq LEMD3-LYZ LEMD3 chr12 65171118 + LYZ chr12 69350108 + Exonic hg38 SARC TCGA-DX-A6BE-01A 63 105 In-Frame Intra-chr q14.3 q15 Seq+ 101220 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPZ1-ITGA7 COPZ1 chr12 54325181 + ITGA7 chr12 55712134 - Exonic hg38 SARC TCGA-DX-A6BE-01A 9 1 Out-of-frame Intra-chr q13.13 q13.2 Tumor suppressor gene Seq+ 101221 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZCCHC6-WIF1 ZCCHC6 chr9 86325334 - WIF1 chr12 65062576 - Exonic hg38 SARC TCGA-DX-A6BE-01A 5 6 Out-of-frame Inter-chr q21.33 q14.3 Tumor suppressor gene Seq+ 101222 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID2-PTPRB ARID2 chr12 45731314 + PTPRB chr12 70540022 - Exonic hg38 SARC TCGA-DX-A6BE-01A 2 17 In-Frame Intra-chr q12 Oncogene Tumor suppressor gene Transcription factor q15 Seq+ 101223 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF562-SARNP ZNF562 chr19 9675015 - SARNP chr12 55752840 - Exonic hg38 SARC TCGA-DX-A6BE-01A 2 15 5'UTR-3'UTR Inter-chr p13.2 Transcription factor q13.2 Seq+ 101224 ChimerSeq TCGA FAWG TCGA_RNA-Seq CARNMT1-KIF21A CARNMT1 chr9 75028012 - KIF21A chr12 39370261 - Exonic hg38 SARC TCGA-DX-A6BE-01A 2 2 In-Frame Inter-chr q21.13 q12 101225 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGA2-C1orf87 HMGA2 chr12 65838569 + C1orf87 chr1 59997816 - Exonic hg38 SARC TCGA-DX-A6BE-01A 1 6 In-Frame Inter-chr q14.3 Transcription factor p32.1 Seq+ 101226 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF562-TEP1 ZNF562 chr19 9674632 - TEP1 chr14 20408463 - Exonic hg38 SARC TCGA-DX-A6BE-01A 1 2 5'UTR-5'UTR Inter-chr p13.2 Transcription factor q11.2 Tumor suppressor gene 101227 ChimerSeq TCGA FAWG TCGA_RNA-Seq KRR1-KCNC2 KRR1 chr12 75506782 - KCNC2 chr12 75051317 - Exonic hg38 SARC TCGA-DX-A6BF-01A 57 175 In-Frame Intra-chr q21.2 q21.1 101228 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-GLIPR1L2 FRS2 chr12 69470530 + GLIPR1L2 chr12 75422904 + Exonic hg38 SARC TCGA-DX-A6BF-01A 38 91 5'UTR-5'UTR Intra-chr q15 q21.2 Seq+ 101229 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACVR2A-CPQ ACVR2A chr2 147845207 + CPQ chr8 96834973 + Exonic hg38 SARC TCGA-DX-A6BF-01A 13 48 In-Frame Inter-chr q22.3 Oncogene q22.1 101230 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNK-ZNF365 CCNK chr14 99495629 + ZNF365 chr10 62666129 + Exonic hg38 SARC TCGA-DX-A6BF-01A 6 16 Out-of-frame Inter-chr q32.2 q21.2 Transcription factor Seq+ 101231 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMTC3-C12orf29 TMTC3 chr12 88176319 + C12orf29 chr12 88040148 + Exonic hg38 SARC TCGA-DX-A6BF-01A 2 30 Out-of-frame Intra-chr q21.32 q21.32 Seq+ 101232 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARL1-UBE2N ARL1 chr12 101407642 - UBE2N chr12 93411299 - Exonic hg38 SARC TCGA-DX-A6BF-01A 1 31 Out-of-frame Intra-chr q23.2 q22 Seq+ 101233 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYRK2-KCNC2 DYRK2 chr12 67658851 + KCNC2 chr12 75051317 - Exonic hg38 SARC TCGA-DX-A6BF-01A 4 8 3'UTR-CDS Intra-chr q15 CMGC:DYRK q21.1 101234 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3IP-BEST3 RAB3IP chr12 69756663 + BEST3 chr12 69684608 - Exonic hg38 SARC TCGA-DX-A6BF-01A 2 8 Out-of-frame Intra-chr q15 q15 Seq+ 101235 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-C1orf141 FRS2 chr12 69537983 + C1orf141 chr1 67111644 - Exonic hg38 SARC TCGA-DX-A6BF-01A 2 7 5'UTR-CDS Inter-chr q15 p31.3 Seq+ 101236 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYRFL-BEST3 MYRFL chr12 69855370 + BEST3 chr12 69643787 - Exonic hg38 SARC TCGA-DX-A6BF-01A 2 2 In-Frame Intra-chr q15 Transcription factor q15 101237 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRIG3-FRS2 LRIG3 chr12 58913982 - FRS2 chr12 69530865 + Exonic hg38 SARC TCGA-DX-A6BF-01A 1 3 CDS-5'UTR Intra-chr q14.1 Tumor suppressor gene q15 101238 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCT2-CACNG3 CCT2 chr12 69585524 + CACNG3 chr16 24361352 + Exonic hg38 SARC TCGA-DX-A6BG-01A 248 760 Out-of-frame Inter-chr q15 p12.1 Seq+ 101239 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGA2-DAB1 HMGA2 chr12 65838569 + DAB1 chr1 56998128 - Exonic hg38 SARC TCGA-DX-A6BG-01A 172 439 CDS-3'UTR Inter-chr q14.3 Transcription factor p32.1 Seq+ 101240 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFC3H1-ITGB6 ZFC3H1 chr12 71610180 - ITGB6 chr2 160142071 - Exonic hg38 SARC TCGA-DX-A6BG-01A 48 199 3'UTR-CDS Inter-chr q21.1 q24.2 Seq+ 101241 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-ZFC3H1 FRS2 chr12 69532056 + ZFC3H1 chr12 71611887 - Exonic hg38 SARC TCGA-DX-A6BG-01A 2 282 5'UTR-CDS Intra-chr q15 q21.1 Seq+ 101242 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIPRL-EFL1 TIPRL chr1 168179181 + EFL1 chr15 82163984 - Exonic hg38 SARC TCGA-DX-A6BG-01A 27 145 Out-of-frame Inter-chr q24.2 q25.2 101243 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF6-PIGC DCAF6 chr1 167987608 + PIGC chr1 172394410 - Exonic hg38 SARC TCGA-DX-A6BG-01A 6 160 CDS-3'UTR Intra-chr q24.2 q24.3 Seq+ 101244 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM3-CD247 DNM3 chr1 172131288 + CD247 chr1 167440767 - Exonic hg38 SARC TCGA-DX-A6BG-01A 20 95 Out-of-frame Intra-chr q24.3 q24.2 Seq+ 101245 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSMR-DNM3 OSMR chr5 38869117 + DNM3 chr1 172081832 + Exonic hg38 SARC TCGA-DX-A6BG-01A 12 92 Out-of-frame Inter-chr p13.1 q24.3 Seq+ 101246 ChimerSeq TCGA FAWG TCGA_RNA-Seq UHRF1BP1L-TSFM UHRF1BP1L chr12 100128580 - TSFM chr12 57796177 + Exonic hg38 SARC TCGA-DX-A6BG-01A 15 73 Out-of-frame Intra-chr q23.1 q14.1 Seq+ 101247 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPC2-DNM3 MPC2 chr1 167935733 - DNM3 chr1 172387133 + Exonic hg38 SARC TCGA-DX-A6BG-01A 10 28 Out-of-frame Intra-chr q24.2 q24.3 Seq+ 101248 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPC2-NUDT12 MPC2 chr1 167935733 - NUDT12 chr5 103560254 - Exonic hg38 SARC TCGA-DX-A6BG-01A 5 34 CDS-5'UTR Inter-chr q24.2 q21.2 Seq+ 101249 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGGY-GOLGA2P5 FGGY chr1 59378837 + GOLGA2P5 chr12 100159968 - Exonic hg38 SARC TCGA-DX-A6BG-01A 2 35 CDS-3'UTR Inter-chr p32.1 q23.1 101250 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL25-CPM METTL25 chr12 82456820 + CPM chr12 68932840 - Exonic hg38 SARC TCGA-DX-A6BG-01A 5 18 5'UTR-5'UTR Intra-chr q21.31 q15 Seq+ 101251 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYLK-VAMP4 MYLK chr3 123793677 - VAMP4 chr1 171710814 - Exonic hg38 SARC TCGA-DX-A6BG-01A 6 9 Out-of-frame Inter-chr q21.1 q24.3 Seq+ 101252 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP2-CNOT2 AGAP2 chr12 57731366 - CNOT2 chr12 70335438 + Exonic hg38 SARC TCGA-DX-A6BG-01A 4 8 Out-of-frame Intra-chr q14.1 q15 Seq+ 101253 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOP1-LYZ TOP1 chr20 41101353 + LYZ chr12 69350108 + Exonic hg38 SARC TCGA-DX-A6BG-01A 3 8 Out-of-frame Inter-chr q12 Oncogene q15 Seq+ 101254 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D15-CNOT2 TBC1D15 chr12 71896780 + CNOT2 chr12 70337389 + Exonic hg38 SARC TCGA-DX-A6BG-01A 3 7 Out-of-frame Intra-chr q21.1 q15 Seq+ 101255 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZEB1-SYT1 ZEB1 chr10 31319292 + SYT1 chr12 78864998 + Exonic hg38 SARC TCGA-DX-A6BG-01A 3 7 5'UTR-5'UTR Inter-chr p11.22 Transcription factor q21.2 Seq+ 101256 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFT2D2-GPR161 SFT2D2 chr1 168226142 + GPR161 chr1 168104894 - Exonic hg38 SARC TCGA-DX-A6BG-01A 1 9 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 101257 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR161-EFL1 GPR161 chr1 168136010 - EFL1 chr15 82230971 - Exonic hg38 SARC TCGA-DX-A6BG-01A 1 5 5'UTR-5'UTR Inter-chr q24.2 q25.2 101258 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT2-LINGO1 CNOT2 chr12 70243480 + LINGO1 chr15 77735053 - Exonic hg38 SARC TCGA-DX-A6BG-01A 1 4 5'UTR-5'UTR Inter-chr q15 q24.3 101259 ChimerSeq TCGA FAWG TCGA_RNA-Seq UHRF1BP1L-CACNG3 UHRF1BP1L chr12 100142592 - CACNG3 chr16 24361352 + Exonic hg38 SARC TCGA-DX-A6BG-01A 1000 1000 Out-of-frame Inter-chr q23.1 p12.1 Seq+ 101260 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRI-PIP4K2C SRI chr7 88210882 - PIP4K2C chr12 57594025 + Exonic hg38 SARC TCGA-DX-A6BH-01A 256 545 In-Frame Inter-chr q21.12 q13.3 Seq+ 101261 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMB1-SELE LAMB1 chr7 107962905 - SELE chr1 169734123 - Exonic hg38 SARC TCGA-DX-A6BH-01A 84 147 CDS-5'UTR Inter-chr q31.1 q24.2 101262 ChimerSeq TCGA FAWG TCGA_RNA-Seq CADPS2-ATP23 CADPS2 chr7 122885999 - ATP23 chr12 57951758 + Exonic hg38 SARC TCGA-DX-A6BH-01A 23 219 5'UTR-5'UTR Inter-chr q31.32 101263 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-RFWD2 FRS2 chr12 69470530 + RFWD2 chr1 176027688 - Exonic hg38 SARC TCGA-DX-A6BH-01A 15 210 Out-of-frame Inter-chr q15 q25.2 Tumor suppressor gene Seq+ 101264 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-AKAP12 FRS2 chr12 69532056 + AKAP12 chr6 151305747 + Exonic hg38 SARC TCGA-DX-A6BH-01A 32 107 5'UTR-CDS Inter-chr q15 q25.1 Tumor suppressor gene Seq+ 101265 ChimerSeq TCGA FAWG TCGA_RNA-Seq AASS-DNM3 AASS chr7 122091703 - DNM3 chr1 172131175 + Exonic hg38 SARC TCGA-DX-A6BH-01A 15 67 In-Frame Inter-chr q31.32 q24.3 Seq+ 101266 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNFAIP3-IL26 TNFAIP3 chr6 137871522 + IL26 chr12 68202083 - Exonic hg38 SARC TCGA-DX-A6BH-01A 16 55 Out-of-frame Inter-chr q23.3 Oncogene Tumor suppressor gene q15 Seq+ 101267 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPSF6-GRM8 CPSF6 chr12 69262562 + GRM8 chr7 127106712 - Exonic hg38 SARC TCGA-DX-A6BH-01A 14 27 3'UTR-3'UTR Inter-chr q15 q31.33 Oncogene Seq+ 101268 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRERF1-ADGRF2 TRERF1 chr6 42451177 - ADGRF2 chr6 47673391 + Exonic hg38 SARC TCGA-DX-A6BH-01A 14 27 5'UTR-5'UTR Intra-chr p21.1 Transcription factor p12.3 101269 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLAGL1-MYRFL PLAGL1 chr6 143960473 - MYRFL chr12 69955363 + Exonic hg38 SARC TCGA-DX-A6BH-01A 1 69 5'UTR-CDS Inter-chr q24.2 Tumor suppressor gene Transcription factor q15 Transcription factor Seq+ 101270 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFWD2-GRM1 RFWD2 chr1 176184633 - GRM1 chr6 146352250 + Exonic hg38 SARC TCGA-DX-A6BH-01A 10 25 Out-of-frame Inter-chr q25.2 Tumor suppressor gene q24.3 Seq+ 101271 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP12-CCND3 AKAP12 chr6 151240724 + CCND3 chr6 41940585 - Exonic hg38 SARC TCGA-DX-A6BH-01A 8 17 In-Frame Intra-chr q25.1 Tumor suppressor gene p21.1 Seq+ 101272 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLAGL1-CPM PLAGL1 chr6 143960469 - CPM chr12 68957678 - Exonic hg38 SARC TCGA-DX-A6BH-01A 6 22 5'UTR-5'UTR Inter-chr q24.2 Tumor suppressor gene Transcription factor q15 101273 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLD-SHPRH DLD chr7 107902393 + SHPRH chr6 145864491 - Exonic hg38 SARC TCGA-DX-A6BH-01A 4 21 CDS-3'UTR Inter-chr q31.1 q24.3 Tumor suppressor gene Seq+ 101274 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXP2-EPM2A FOXP2 chr7 114163088 + EPM2A chr6 145502575 - Exonic hg38 SARC TCGA-DX-A6BH-01A 3 24 Out-of-frame Inter-chr q31.1 Transcription factor q24.3 Seq+ 101275 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM3-SHISA9 DNM3 chr1 172253682 + SHISA9 chr16 13235030 + Exonic hg38 SARC TCGA-DX-A6BH-01A 2 20 Out-of-frame Inter-chr q24.3 p13.12 Seq+ 101276 ChimerSeq TCGA FAWG TCGA_RNA-Seq AASS-ADGRF2 AASS chr7 122113118 - ADGRF2 chr6 47680206 + Exonic hg38 SARC TCGA-DX-A6BH-01A 3 15 In-Frame Inter-chr q31.32 p12.3 101277 ChimerSeq TCGA FAWG TCGA_RNA-Seq REPS1-KCNMB4 REPS1 chr6 138920215 - KCNMB4 chr12 70400209 + Exonic hg38 SARC TCGA-DX-A6BH-01A 2 8 Out-of-frame Inter-chr q24.1 q15 101278 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARFGEF3-RFWD2 ARFGEF3 chr6 138242994 + RFWD2 chr1 176176007 - Exonic hg38 SARC TCGA-DX-A6BH-01A 2 6 Out-of-frame Inter-chr q23.3 q25.2 Tumor suppressor gene 101279 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARFGEF3-MED20 ARFGEF3 chr6 138242994 + MED20 chr6 41909522 - Exonic hg38 SARC TCGA-DX-A6BH-01A 2 4 In-Frame Intra-chr q23.3 p21.1 101280 ChimerSeq TCGA FAWG TCGA_RNA-Seq UTRN-LAMB4 UTRN chr6 144448769 + LAMB4 chr7 108037595 - Exonic hg38 SARC TCGA-DX-A6BH-01A 1000 1000 Out-of-frame Inter-chr q24.2 q31.1 Seq+ 101281 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-AHCYL2 FRS2 chr12 69574085 + AHCYL2 chr7 129379641 + Exonic hg38 SARC TCGA-DX-A6BH-01A 1000 1000 In-Frame Inter-chr q15 q32.1 Seq+ 101282 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP3-ARHGAP27 SENP3 chr17 7571649 + ARHGAP27 chr17 45395201 - Exonic hg38 SARC TCGA-DX-A6YQ-01A 11 86 Out-of-frame Intra-chr p13.1 101283 ChimerSeq TCGA FAWG TCGA_RNA-Seq RGS17-PDLIM5 RGS17 chr6 153043900 - PDLIM5 chr4 94662422 + Exonic hg38 SARC TCGA-DX-A6YQ-01A 5 49 Out-of-frame Inter-chr q25.2 q22.3 Seq+ 101284 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAAF5-LAMA5 DNAAF5 chr7 729847 + LAMA5 chr20 62311094 - Exonic hg38 SARC TCGA-DX-A6YQ-01A 5 30 Out-of-frame Inter-chr p22.3 q13.33 101285 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBLN7-ALOXE3 FBLN7 chr2 112185339 + ALOXE3 chr17 8109254 - Exonic hg38 SARC TCGA-DX-A6YQ-01A 3 6 Out-of-frame Inter-chr q13 p13.1 101286 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED26-ABHD8 MED26 chr19 16627872 - ABHD8 chr19 17301624 - Exonic hg38 SARC TCGA-DX-A6YQ-01A 3 4 CDS-5'UTR Intra-chr p13.11 p13.11 101287 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO9B-CPAMD8 MYO9B chr19 17206152 + CPAMD8 chr19 16980686 - Exonic hg38 SARC TCGA-DX-A6YQ-01A 2 4 Out-of-frame Intra-chr p13.11 p13.11 101288 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDA1-TMEM38A DDA1 chr19 17314389 + TMEM38A chr19 16679984 + Exonic hg38 SARC TCGA-DX-A6YQ-01A 2 3 In-Frame Intra-chr p13.11 p13.11 101289 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP38-RIT2 USP38 chr4 143187961 + RIT2 chr18 42743720 - Exonic hg38 SARC TCGA-DX-A6YR-01A 23 69 Out-of-frame Inter-chr q31.21 q12.3 Seq+ 101290 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMBOX1-MCM3 HMBOX1 chr8 28890678 + MCM3 chr6 52269226 - Exonic hg38 SARC TCGA-DX-A6YR-01A 19 54 5'UTR-CDS Inter-chr p21.1 Transcription factor p12.2 Seq+ 101291 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBQLN1-NLRP5 UBQLN1 chr9 83677727 - NLRP5 chr19 56020375 + Exonic hg38 SARC TCGA-DX-A6YR-01A 6 20 In-Frame Inter-chr q21.32 q13.43 Seq+ 101292 ChimerSeq TCGA FAWG TCGA_RNA-Seq ICK-GSTA9P ICK chr6 53041136 - GSTA9P chr6 52940016 - Exonic hg38 SARC TCGA-DX-A6YR-01A 5 20 Out-of-frame Intra-chr p12.1 CMGC:RCK Oncogene p12.2 101293 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRIP1-DSCAM NRIP1 chr21 15014344 - DSCAM chr21 40084006 - Exonic hg38 SARC TCGA-DX-A6YR-01A 6 9 5'UTR-CDS Intra-chr q21.1 q22.2 Seq+ 101294 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBX1-RFWD2 PBX1 chr1 164563311 + RFWD2 chr1 175989479 - Exonic hg38 SARC TCGA-DX-A6YR-01A 3 12 Out-of-frame Intra-chr q23.3 Oncogene Transcription factor q25.2 Tumor suppressor gene Seq+ 101295 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM98A-BRE FAM98A chr2 33595489 - BRE chr2 28241323 + Exonic hg38 SARC TCGA-DX-A6YR-01A 2 13 Out-of-frame Intra-chr p22.3 Seq+ 101296 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRID1-AFAP1L2 GRID1 chr10 86363941 - AFAP1L2 chr10 114340731 - Exonic hg38 SARC TCGA-DX-A6YR-01A 2 5 In-Frame Intra-chr q23.2 q25.3 Tumor suppressor gene Seq+ 101297 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC28-PIWIL3 TTC28 chr22 28679622 - PIWIL3 chr22 24719588 - Exonic hg38 SARC TCGA-DX-A6YR-01A 1 9 In-Frame Intra-chr q12.1 q11.23 101298 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLIM4-WDR49 GOLIM4 chr3 168095099 - WDR49 chr3 167576151 - Exonic hg38 SARC TCGA-DX-A6YR-01A 1 5 Out-of-frame Intra-chr q26.2 q26.1 101299 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6R2-AURKC PPP6R2 chr22 50423614 + AURKC chr19 57231742 + Exonic hg38 SARC TCGA-DX-A6YR-01A 1 5 Out-of-frame Inter-chr q13.33 q13.43 Oncogene Seq+ 101300 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS5-CYYR1 ADAMTS5 chr21 26943380 - CYYR1 chr21 26480429 - Exonic hg38 SARC TCGA-DX-A6YS-01A 36 50 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 101301 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT11-TMEM196 SEPT11 chr4 77020818 + TMEM196 chr7 19719879 - Exonic hg38 SARC TCGA-DX-A6YS-01A 15 13 Out-of-frame Inter-chr q21.1 p21.1 Seq+ 101302 ChimerSeq TCGA FAWG TCGA_RNA-Seq APPBP2-SETD2 APPBP2 chr17 60494466 - SETD2 chr3 47019840 - Exonic hg38 SARC TCGA-DX-A6YS-01A 10 18 Out-of-frame Inter-chr q23.2 p21.31 Oncogene Tumor suppressor gene Seq+ 101303 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD36-ELMO1 CD36 chr7 80487781 + ELMO1 chr7 37133234 - Exonic hg38 SARC TCGA-DX-A6YS-01A 9 6 5'UTR-CDS Intra-chr q21.11 p14.1 101304 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB10-SCMH1 GRB10 chr7 50614770 - SCMH1 chr1 41028726 - Exonic hg38 SARC TCGA-DX-A6YS-01A 8 4 Out-of-frame Inter-chr p12.1 p34.2 Transcription factor Seq+ 101305 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXO5-MTF1 EXO5 chr1 40508877 + MTF1 chr1 37857709 - Exonic hg38 SARC TCGA-DX-A6YS-01A 2 16 5'UTR-5'UTR Intra-chr p34.2 p34.3 Transcription factor Seq+ 101306 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF5-CTAGE5 EIF5 chr14 103341125 + CTAGE5 chr14 39326864 + Exonic hg38 SARC TCGA-DX-A6YS-01A 5 3 Out-of-frame Intra-chr q32.32 q21.1 101307 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP5L-ARCN1 ATP5L chr11 118401717 + ARCN1 chr11 118581246 + Exonic hg38 SARC TCGA-DX-A6YS-01A 2 10 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 101308 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBNL2-MADD MBNL2 chr13 97276409 + MADD chr11 47308591 + Exonic hg38 SARC TCGA-DX-A6YS-01A 1 10 In-Frame Inter-chr q32.1 Transcription factor p11.2 Tumor suppressor gene Seq+ 101309 ChimerSeq TCGA FAWG TCGA_RNA-Seq STX5-TAF6L STX5 chr11 62824166 - TAF6L chr11 62775771 + Exonic hg38 SARC TCGA-DX-A6YS-01A 1 5 CDS-5'UTR Intra-chr q12.3 q12.3 Seq+ 101310 ChimerSeq TCGA FAWG TCGA_RNA-Seq UPRT-GPR141 UPRT chrX 75299896 + GPR141 chr7 37729916 + Exonic hg38 SARC TCGA-DX-A6YS-01A 1 3 5'UTR-5'UTR Inter-chr q13.3 p14.1 101311 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM25-ACOT6 RBM25 chr14 73083551 + ACOT6 chr14 73616990 + Exonic hg38 SARC TCGA-DX-A6YT-01A 15 96 CDS-5'UTR Intra-chr q24.2 q24.3 Seq+ 101312 ChimerSeq TCGA FAWG TCGA_RNA-Seq STXBP6-ZNF410 STXBP6 chr14 24974665 - ZNF410 chr14 73903960 + Exonic hg38 SARC TCGA-DX-A6YT-01A 17 38 In-Frame Intra-chr q12 q24.3 Transcription factor Seq+ 101313 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZCCHC4-SMIM20 ZCCHC4 chr4 25315400 + SMIM20 chr4 25928313 + Exonic hg38 SARC TCGA-DX-A6YT-01A 8 14 Out-of-frame Intra-chr p15.2 p15.2 Seq+ 101314 ChimerSeq TCGA FAWG TCGA_RNA-Seq UTP6-SLC13A5 UTP6 chr17 31892260 - SLC13A5 chr17 6707156 - Exonic hg38 SARC TCGA-DX-A6YT-01A 4 5 Out-of-frame Intra-chr q11.2 p13.1 Seq+ 101315 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACOT2-ZNF320 ACOT2 chr14 73569883 + ZNF320 chr19 52881983 - Exonic hg38 SARC TCGA-DX-A6YT-01A 1 6 In-Frame Inter-chr q24.3 q13.41 Transcription factor Seq+ 101316 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAN2A1-HTR4 MAN2A1 chr5 109789527 + HTR4 chr5 148451272 - Exonic hg38 SARC TCGA-DX-A6YU-01A 1 18 In-Frame Intra-chr q21.3 q32 Seq+ 101317 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFI16-UAP1 IFI16 chr1 159016700 + UAP1 chr1 162576777 + Exonic hg38 SARC TCGA-DX-A6YV-01A 20 98 Out-of-frame Intra-chr q23.1 Tumor suppressor gene q23.3 Seq+ 101318 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLI2-SPOP GLI2 chr2 120927466 + SPOP chr17 49622876 - Exonic hg38 SARC TCGA-DX-A6YV-01A 6 123 CDS-5'UTR Inter-chr q14.2 Transcription factor q21.33 Oncogene Tumor suppressor gene Seq+ 101319 ChimerSeq TCGA FAWG TCGA_RNA-Seq URI1-RHPN2 URI1 chr19 29942664 + RHPN2 chr19 32994053 - Exonic hg38 SARC TCGA-DX-A6YV-01A 7 19 Out-of-frame Intra-chr q12 q13.11 101320 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHC2-MFSD11 PHC2 chr1 33349597 - MFSD11 chr17 76767386 + Exonic hg38 SARC TCGA-DX-A6YV-01A 4 13 5'UTR-5'UTR Inter-chr p35.1 q25.1 Seq+ 101321 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRK6-B4GALT7 GRK6 chr5 177426897 + B4GALT7 chr5 177607302 + Exonic hg38 SARC TCGA-DX-A6YV-01A 4 12 Out-of-frame Intra-chr q35.3 q35.3 Seq+ 101322 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYH10-FXR2 MYH10 chr17 8487433 - FXR2 chr17 7592894 - Exonic hg38 SARC TCGA-DX-A6YV-01A 5 8 Out-of-frame Intra-chr p13.1 p13.1 101323 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSTF1-MED13 CSTF1 chr20 56403798 + MED13 chr17 61972888 - Exonic hg38 SARC TCGA-DX-A6YV-01A 3 6 5'UTR-CDS Inter-chr q13.2 q23.2 101324 ChimerSeq TCGA FAWG TCGA_RNA-Seq BOP1-NECAB1 BOP1 chr8 144276224 - NECAB1 chr8 90801691 + Exonic hg38 SARC TCGA-DX-A6YX-01A 38 88 In-Frame Intra-chr q24.3 q21.3 Seq+ 101325 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-RAB11FIP4 NF1 chr17 31249119 + RAB11FIP4 chr17 31517651 + Exonic hg38 SARC TCGA-DX-A6YX-01A 15 140 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 101326 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFHX4-TRAM1 ZFHX4 chr8 76778439 + TRAM1 chr8 70575005 - Exonic hg38 SARC TCGA-DX-A6YX-01A 9 54 In-Frame Intra-chr q21.13 Transcription factor q13.3 Seq+ 101327 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP8-TSPAN3 USP8 chr15 50471795 + TSPAN3 chr15 77056255 - Exonic hg38 SARC TCGA-DX-A6YZ-01A 41 97 In-Frame Intra-chr q21.2 q24.3 Seq+ 101328 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC23B-NAPB SEC23B chr20 18507990 + NAPB chr20 23381317 - Exonic hg38 SARC TCGA-DX-A6YZ-01A 4 3 5'UTR-CDS Intra-chr p11.23 p11.21 Seq+ 101329 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC6B-SEMA6D TNRC6B chr22 40156182 + SEMA6D chr15 47470474 + Exonic hg38 SARC TCGA-DX-A6YZ-01A 3 4 CDS-5'UTR Inter-chr q13.1 q21.1 Seq+ 101330 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRS-ZNF627 PTPRS chr19 5274199 - ZNF627 chr19 11614527 + Exonic hg38 SARC TCGA-DX-A6Z0-01A 5 23 In-Frame Intra-chr p13.3 p13.2 Transcription factor Seq+ 101331 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRK-NAP1L4P2 NRK chrX 105831119 + NAP1L4P2 chrX 106466688 - Exonic hg38 SARC TCGA-DX-A6Z0-01A 5 14 Out-of-frame Intra-chr q22.3 STE:STE20 q22.3 Seq+ 101332 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM135-HK1 TMEM135 chr11 87157406 + HK1 chr10 69398595 + Exonic hg38 SARC TCGA-DX-A6Z0-01A 4 3 Out-of-frame Inter-chr q14.2 q22.1 Seq+ 101333 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN18-TEX13B TSPAN18 chr11 44860469 + TEX13B chrX 107982159 - Exonic hg38 SARC TCGA-DX-A6Z0-01A 2 4 5'UTR-5'UTR Inter-chr p11.2 q22.3 Seq+ 101334 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D2B-INTS4 TBC1D2B chr15 77998195 - INTS4 chr11 77883952 - Exonic hg38 SARC TCGA-DX-A6Z2-01A 9 64 Out-of-frame Inter-chr q25.1 q14.1 Seq+ 101335 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIO-TERT TRIO chr5 14420021 + TERT chr5 1282624 - Exonic hg38 SARC TCGA-DX-A7EF-01A 9 62 In-Frame Intra-chr p15.2 p15.33 Oncogene Seq+ 101336 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRMT7-EXOC4 PRMT7 chr16 68346280 + EXOC4 chr7 133895599 + Exonic hg38 SARC TCGA-DX-A7EF-01A 8 27 In-Frame Inter-chr q22.1 q33 Seq+ 101337 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNMT-SNCAIP RNMT chr18 13726729 + SNCAIP chr5 122440629 + Exonic hg38 SARC TCGA-DX-A7EF-01A 11 5 5'UTR-5'UTR Inter-chr p11.21 q23.2 101338 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53-PXDNL TP53 chr17 7674181 - PXDNL chr8 51654760 - Exonic hg38 SARC TCGA-DX-A7EF-01A 3 5 In-Frame Inter-chr p13.1 Oncogene Tumor suppressor gene Transcription factor q11.23 101339 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP72-CDH9 CEP72 chr5 639224 + CDH9 chr5 26902729 - Exonic hg38 SARC TCGA-DX-A7EF-01A 1 10 Out-of-frame Intra-chr p14.1 Seq+ 101340 ChimerSeq TCGA FAWG TCGA_RNA-Seq HERC2P2-CACNA2D1 HERC2P2 chr15 22579723 + CACNA2D1 chr7 82335251 - Exonic hg38 SARC TCGA-DX-A7EF-01A 1 6 3'UTR-CDS Inter-chr q11.2 q21.11 101341 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-PARP1 FRS2 chr12 69470530 + PARP1 chr1 226370517 - Exonic hg38 SARC TCGA-DX-A7EI-01A 139 601 5'UTR-CDS Inter-chr q15 q42.12 Oncogene Tumor suppressor gene Seq+ 101342 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL42-FGD6 MRPL42 chr12 93487660 + FGD6 chr12 95081556 - Exonic hg38 SARC TCGA-DX-A7EI-01A 164 252 In-Frame Intra-chr q22 q22 Seq+ 101343 ChimerSeq TCGA FAWG TCGA_RNA-Seq LSM14A-TMTC2 LSM14A chr19 34209051 + TMTC2 chr12 83132210 + Exonic hg38 SARC TCGA-DX-A7EI-01A 58 364 3'UTR-CDS Inter-chr q21.31 Seq+ 101344 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSP2-LSM14A CTDSP2 chr12 57846372 - LSM14A chr19 34208929 + Exonic hg38 SARC TCGA-DX-A7EI-01A 100 187 CDS-3'UTR Inter-chr q14.1 Seq+ 101345 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-TBK1 FRS2 chr12 69470530 + TBK1 chr12 64466901 + Exonic hg38 SARC TCGA-DX-A7EI-01A 39 231 5'UTR-CDS Intra-chr q15 q14.2 Other:IKK Seq+ 101346 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEA1-HOTAIR EEA1 chr12 92929043 - HOTAIR chr12 53968756 - Exonic hg38 SARC TCGA-DX-A7EI-01A 28 215 CDS-5'UTR Intra-chr q22 Transcription factor q13.13 Seq+ 101347 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRICKLE1-LRIG3 PRICKLE1 chr12 42589465 - LRIG3 chr12 58890796 - Exonic hg38 SARC TCGA-DX-A7EI-01A 45 93 5'UTR-CDS Intra-chr q12 Tumor suppressor gene q14.1 Tumor suppressor gene Seq+ 101348 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSP2-TMTC2 CTDSP2 chr12 57846372 - TMTC2 chr12 83132210 + Exonic hg38 SARC TCGA-DX-A7EI-01A 5 79 Out-of-frame Intra-chr q14.1 q21.31 Seq+ 101349 ChimerSeq TCGA FAWG TCGA_RNA-Seq NR2C1-BCL7A NR2C1 chr12 95067331 - BCL7A chr12 122030700 + Exonic hg38 SARC TCGA-DX-A7EI-01A 16 35 CDS-3'UTR Intra-chr q22 Transcription factor Seq+ 101350 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF5A-NAV3 KIF5A chr12 57583215 + NAV3 chr12 78200473 + Exonic hg38 SARC TCGA-DX-A7EI-01A 12 24 3'UTR-CDS Intra-chr q13.3 q21.2 Seq+ 101351 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL7-CDH10 FBXL7 chr5 15616072 + CDH10 chr5 24593613 - Exonic hg38 SARC TCGA-DX-A7EI-01A 5 37 5'UTR-5'UTR Intra-chr p15.1 p14.1 Seq+ 101352 ChimerSeq TCGA FAWG TCGA_RNA-Seq DISC1-MDM1 DISC1 chr1 231818517 + MDM1 chr12 68321628 - Exonic hg38 SARC TCGA-DX-A7EI-01A 9 17 Out-of-frame Inter-chr q42.2 q15 Seq+ 101353 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAWR-MARC1 PAWR chr12 79689729 - MARC1 chr1 220796643 + Exonic hg38 SARC TCGA-DX-A7EI-01A 8 21 Out-of-frame Inter-chr q21.2 Tumor suppressor gene q41 Seq+ 101354 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDHAF1-TSPAN8 SDHAF1 chr19 35995708 + TSPAN8 chr12 71132824 - Exonic hg38 SARC TCGA-DX-A7EI-01A 7 25 3'UTR-CDS Inter-chr q13.12 q21.1 Seq+ 101355 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARC1-VPS33A MARC1 chr1 220798014 + VPS33A chr12 122264199 - Exonic hg38 SARC TCGA-DX-A7EI-01A 9 16 In-Frame Inter-chr q41 q24.31 Seq+ 101356 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM105A-AR FAM105A chr5 14609017 + AR chrX 67728674 + Exonic hg38 SARC TCGA-DX-A7EI-01A 6 8 Out-of-frame Inter-chr p15.2 q12 Oncogene Tumor suppressor gene Transcription factor Seq+ 101357 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAV3-SLC25A27 NAV3 chr12 77325214 + SLC25A27 chr6 46668709 + Exonic hg38 SARC TCGA-DX-A7EI-01A 4 15 5'UTR-CDS Inter-chr q21.2 p12.3 101358 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARFGEF1-SHC1 ARFGEF1 chr8 67299209 - SHC1 chr1 154970199 - Exonic hg38 SARC TCGA-DX-A7EI-01A 4 12 CDS-5'UTR Inter-chr q13.2 q21.3 Seq+ 101359 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCAM2-PAWR NCAM2 chr21 21374013 + PAWR chr12 79668408 - Exonic hg38 SARC TCGA-DX-A7EI-01A 5 7 Out-of-frame Inter-chr q21.1 Tumor suppressor gene q21.2 Tumor suppressor gene Seq+ 101360 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAV1-CPM NAV1 chr1 201740076 + CPM chr12 68885889 - Exonic hg38 SARC TCGA-DX-A7EI-01A 3 13 Out-of-frame Inter-chr q32.1 q15 Seq+ 101361 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS33A-GLTSCR1L VPS33A chr12 122232326 - GLTSCR1L chr6 42855856 + Exonic hg38 SARC TCGA-DX-A7EI-01A 4 8 Out-of-frame Inter-chr q24.31 Seq+ 101362 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF25-NTRK1 ARHGEF25 chr12 57615017 + NTRK1 chr1 156871623 + Exonic hg38 SARC TCGA-DX-A7EI-01A 2 15 In-Frame Inter-chr q13.3 q23.1 Oncogene Seq+ 101363 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA11-NBPF13P ITGA11 chr15 68339500 - NBPF13P chr1 147099893 - Exonic hg38 SARC TCGA-DX-A7EI-01A 2 10 CDS-3'UTR Inter-chr q23 q21.1 101364 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEF2D-CD55 MEF2D chr1 156500486 - CD55 chr1 207359546 + Exonic hg38 SARC TCGA-DX-A7EI-01A 3 4 5'UTR-5'UTR Intra-chr q22 Transcription factor q32.2 Seq+ 101365 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIP13-GPATCH2 TRIP13 chr5 914577 + GPATCH2 chr1 217431365 - Exonic hg38 SARC TCGA-DX-A7EI-01A 2 7 Out-of-frame Inter-chr p15.33 q41 Seq+ 101366 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL1A1-VIM COL1A1 chr17 50194130 - VIM chr10 17236294 + Exonic hg38 SARC TCGA-DX-A7EI-01A 1 8 Out-of-frame Inter-chr q21.33 Oncogene p13 Tumor suppressor gene 101367 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP39A1-VPS33A CYP39A1 chr6 46630963 - VPS33A chr12 122261447 - Exonic hg38 SARC TCGA-DX-A7EI-01A 1 8 Out-of-frame Inter-chr p12.3 q24.31 Seq+ 101368 ChimerSeq TCGA FAWG TCGA_RNA-Seq PMEPA1-COX6B1 PMEPA1 chr20 57711324 - COX6B1 chr19 35654571 + Exonic hg38 SARC TCGA-DX-A7EI-01A 1 8 5'UTR-CDS Inter-chr q13.31 q13.12 101369 ChimerSeq TCGA FAWG TCGA_RNA-Seq LGR5-PPFIA2 LGR5 chr12 71535186 + PPFIA2 chr12 81457866 - Exonic hg38 SARC TCGA-DX-A7EI-01A 1 5 Out-of-frame Intra-chr q21.1 q21.31 Seq+ 101370 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF1A-RRP15 TAF1A chr1 222589727 - RRP15 chr1 218330948 + Exonic hg38 SARC TCGA-DX-A7EI-01A 1 5 5'UTR-CDS Intra-chr q41 q41 101371 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACSS3-CYP39A1 ACSS3 chr12 81078431 + CYP39A1 chr6 46550437 - Exonic hg38 SARC TCGA-DX-A7EI-01A 1000 1000 Out-of-frame Inter-chr q21.31 p12.3 Seq+ 101372 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC38A2-RAB3IP SLC38A2 chr12 46372509 - RAB3IP chr12 69784720 + Exonic hg38 SARC TCGA-DX-A7EI-01A 1000 1000 5'UTR-5'UTR Intra-chr q13.11 q15 Seq+ 101373 ChimerSeq TCGA FAWG TCGA_RNA-Seq CARMN-ARHGEF37 CARMN chr5 149431624 + ARHGEF37 chr5 149618861 + Exonic hg38 SARC TCGA-DX-A7EL-01A 3 39 Out-of-frame Intra-chr q32 q32 101374 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF540-ZNF536 ZNF540 chr19 37601105 + ZNF536 chr19 30710757 + Exonic hg38 SARC TCGA-DX-A7EN-01A 2 8 CDS-3'UTR Intra-chr q13.12 Transcription factor q12 Transcription factor 101375 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H3-TRAPPC9 ZC3H3 chr8 143536257 - TRAPPC9 chr8 140451383 - Exonic hg38 SARC TCGA-DX-A7EN-01A 2 6 5'UTR-5'UTR Intra-chr q24.3 Seq+ 101376 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHIP-MYO6 PHIP chr6 79060478 - MYO6 chr6 75817501 + Exonic hg38 SARC TCGA-DX-A7EN-01A 2 4 CDS-5'UTR Intra-chr q14.1 q14.1 Seq+ 101377 ChimerSeq TCGA FAWG TCGA_RNA-Seq SS18-SSX2 SS18 chr18 26032399 - SSX2 chrX 52700578 - Exonic hg38 SARC TCGA-DX-A7EO-01A 40 53 CDS-5'UTR Inter-chr q11.2 p11.22 KB Pub Seq+ 101378 ChimerSeq TCGA FAWG TCGA_RNA-Seq SS18-SSX2 SS18 chr18 26032399 - SSX2 chrX 52700578 - Exonic hg38 SARC TCGA-DX-A7ER-01A 33 44 CDS-5'UTR Inter-chr q11.2 p11.22 KB Pub Seq+ 101379 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAND1-IL22 CAND1 chr12 67292776 + IL22 chr12 68248876 - Exonic hg38 SARC TCGA-DX-A7ES-01A 46 180 Out-of-frame Intra-chr q14.3 q15 Seq+ 101380 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMB7-NR6A1 PSMB7 chr9 124405317 - NR6A1 chr9 124554570 - Exonic hg38 SARC TCGA-DX-A7ES-01A 21 88 In-Frame Intra-chr q33.3 q33.3 Transcription factor Seq+ 101381 ChimerSeq TCGA FAWG TCGA_RNA-Seq SULF1-TERF1 SULF1 chr8 69621251 + TERF1 chr8 73045961 + Exonic hg38 SARC TCGA-DX-A7ET-01A 2 19 Out-of-frame Intra-chr q13.2 q21.11 Transcription factor Seq+ 101382 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENO1-TAS1R1 ENO1 chr1 8867988 - TAS1R1 chr1 6579042 + Exonic hg38 SARC TCGA-DX-A7EU-01A 48 260 In-Frame Intra-chr p36.23 p36.31 Seq+ 101383 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1G-KATNA1 PPM1G chr2 27409303 - KATNA1 chr6 149598350 - Exonic hg38 SARC TCGA-DX-A7EU-01A 11 31 In-Frame Inter-chr p23.3 q25.1 Seq+ 101384 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKI-CAPZB SKI chr1 2229735 + CAPZB chr1 19419750 - Exonic hg38 SARC TCGA-DX-A7EU-01A 9 28 In-Frame Intra-chr p36.33 Transcription factor p36.13 Seq+ 101385 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARRB1-LY9 ARRB1 chr11 75351588 - LY9 chr1 160813636 + Exonic hg38 SARC TCGA-DX-A7EU-01A 4 20 Out-of-frame Inter-chr q13.4 q23.3 Seq+ 101386 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEG3-AKAP6 MEG3 chr14 100836300 + AKAP6 chr14 32535554 + Exonic hg38 SARC TCGA-DX-A7EU-01A 6 11 5'UTR-CDS Intra-chr q32.2 Tumor suppressor gene q12 101387 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEG8-AKAP6 MEG8 chr14 100836300 + AKAP6 chr14 32535554 + Exonic hg38 SARC TCGA-DX-A7EU-01A 6 7 5'UTR-CDS Intra-chr q32.2 q12 101388 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOVA1-IFNGR2 NOVA1 chr14 26472320 - IFNGR2 chr21 33410836 + Exonic hg38 SARC TCGA-DX-A7EU-01A 1 12 CDS-3'UTR Inter-chr q12 101389 ChimerSeq TCGA FAWG TCGA_RNA-Seq CA6-RER1 CA6 chr1 8949442 + RER1 chr1 2403035 + Exonic hg38 SARC TCGA-DX-A7EU-01A 3 2 Out-of-frame Intra-chr p36.23 p36.32 Seq+ 101390 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPP3-FAM163A DPP3 chr11 66482470 + FAM163A chr1 179807798 + Exonic hg38 SARC TCGA-DX-A7EU-01A 2 4 CDS-5'UTR Inter-chr q13.2 q25.2 Seq+ 101391 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPS1-SGO2 CPS1 chr2 210650438 + SGO2 chr2 200583449 + Exonic hg38 SARC TCGA-DX-A7EU-01A 1 4 Out-of-frame Intra-chr q34 q33.1 101392 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLGA4-FAM135B GOLGA4 chr3 37251484 + FAM135B chr8 138265842 - Exonic hg38 SARC TCGA-DX-A7EU-01A 1 3 Out-of-frame Inter-chr p22.2 q24.23 Seq+ 101393 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPON1-SBF2 SPON1 chr11 13963142 + SBF2 chr11 10042981 - Exonic hg38 SARC TCGA-DX-A7EU-01A 1 3 Out-of-frame Intra-chr p15.2 p15.4 Seq+ 101394 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNB2-SALL2 KCNB2 chr8 72568313 + SALL2 chr14 21525654 - Exonic hg38 SARC TCGA-DX-A7EU-01A 1 1 Out-of-frame Inter-chr q21.11 q11.2 Tumor suppressor gene Transcription factor 101395 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAT1-SUMO1 STAT1 chr2 190974830 - SUMO1 chr2 202210806 - Exonic hg38 SARC TCGA-DX-A8BG-01A 300 427 In-Frame Intra-chr q32.2 Tumor suppressor gene Transcription factor q33.1 Seq+ 101396 ChimerSeq TCGA FAWG TCGA_RNA-Seq AATF-AP2B1 AATF chr17 36953907 + AP2B1 chr17 35710234 + Exonic hg38 SARC TCGA-DX-A8BG-01A 19 46 3'UTR-3'UTR Intra-chr q12 Seq+ 101397 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDGFA-GET4 PDGFA chr7 518939 - GET4 chr7 886056 + Exonic hg38 SARC TCGA-DX-A8BG-01A 7 18 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 101398 ChimerSeq TCGA FAWG TCGA_RNA-Seq OGFOD3-TTC25 OGFOD3 chr17 82415398 - TTC25 chr17 41961382 + Exonic hg38 SARC TCGA-DX-A8BG-01A 2 21 In-Frame Intra-chr q25.3 q21.2 101399 ChimerSeq TCGA FAWG TCGA_RNA-Seq FER-COMMD10 FER chr5 108835807 + COMMD10 chr5 116291517 + Exonic hg38 SARC TCGA-DX-A8BG-01A 3 9 Out-of-frame Intra-chr q21.3 TK:Fer q23.1 Seq+ 101400 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYM-CFAP53 DYM chr18 49097402 - CFAP53 chr18 50227609 - Exonic hg38 SARC TCGA-DX-A8BG-01A 1 13 Out-of-frame Intra-chr q21.1 q21.1 101401 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGO3-ISG20 AGO3 chr1 36009594 + ISG20 chr15 88639343 + Exonic hg38 SARC TCGA-DX-A8BG-01A 1 3 CDS-5'UTR Inter-chr p34.3 q26.1 101402 ChimerSeq TCGA FAWG TCGA_RNA-Seq MFSD1-CLDN11 MFSD1 chr3 158814067 + CLDN11 chr3 170754389 + Exonic hg38 SARC TCGA-DX-A8BH-01A 152 544 CDS-3'UTR Intra-chr q25.32 q26.2 Seq+ 101403 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF38-CCL19 RNF38 chr9 36487308 - CCL19 chr9 34690342 - Exonic hg38 SARC TCGA-DX-A8BH-01A 26 32 5'UTR-CDS Intra-chr p13.2 p13.3 101404 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLG1-FAIM DLG1 chr3 197194425 - FAIM chr3 138621407 + Exonic hg38 SARC TCGA-DX-A8BH-01A 3 37 Out-of-frame Intra-chr q29 Tumor suppressor gene q22.3 Seq+ 101405 ChimerSeq TCGA FAWG TCGA_RNA-Seq MFSD1-SPTSSB MFSD1 chr3 158814067 + SPTSSB chr3 161359894 - Exonic hg38 SARC TCGA-DX-A8BH-01A 4 5 5'UTR-5'UTR Intra-chr q25.32 q26.1 Seq+ 101406 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZCCHC7-UNC13B ZCCHC7 chr9 37126942 + UNC13B chr9 35366947 + Exonic hg38 SARC TCGA-DX-A8BH-01A 2 9 Out-of-frame Intra-chr p13.2 p13.3 Seq+ 101407 ChimerSeq TCGA FAWG TCGA_RNA-Seq PALLD-ANXA10 PALLD chr4 168631900 + ANXA10 chr4 168162528 + Exonic hg38 SARC TCGA-DX-A8BJ-01A 1 11 5'UTR-CDS Intra-chr q32.3 q32.3 Seq+ 101408 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF16-PLEKHA4 ZNF16 chr8 144946011 - PLEKHA4 chr19 48852326 - Exonic hg38 SARC TCGA-DX-A8BJ-01A 2 4 Out-of-frame Inter-chr q24.3 Transcription factor q13.33 Seq+ 101409 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDZD4-CMC4 PDZD4 chrX 153830239 - CMC4 chrX 155064033 - Exonic hg38 SARC TCGA-DX-A8BK-01A 9 27 5'UTR-5'UTR Intra-chr q28 q28 101410 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDZD4-MTCP1 PDZD4 chrX 153830239 - MTCP1 chrX 155064033 - Exonic hg38 SARC TCGA-DX-A8BK-01A 9 27 CDS-3'UTR Intra-chr q28 q28 101411 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHD4-TEX41 EHD4 chr15 41972259 - TEX41 chr2 145182204 + Exonic hg38 SARC TCGA-DX-A8BK-01A 3 7 CDS-3'UTR Inter-chr q15.1 q22.3 101412 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATRX-CRACR2A ATRX chrX 77785982 - CRACR2A chr12 3713317 - Exonic hg38 SARC TCGA-DX-A8BK-01A 2 10 CDS-5'UTR Inter-chr q21.1 Oncogene p13.32 101413 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTUS2-SIRT7 MTUS2 chr13 29480364 + SIRT7 chr17 81917967 - Exonic hg38 SARC TCGA-DX-A8BK-01A 2 4 In-Frame Inter-chr q12.3 q25.3 Seq+ 101414 ChimerSeq TCGA FAWG TCGA_RNA-Seq URI1-CHD4 URI1 chr19 29986417 + CHD4 chr12 6573269 - Exonic hg38 SARC TCGA-DX-A8BK-01A 1 6 Out-of-frame Inter-chr q12 p13.31 101415 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4-RBM42 MAP4 chr3 47914817 - RBM42 chr19 35633098 + Exonic hg38 SARC TCGA-DX-A8BL-01A 28 157 In-Frame Inter-chr p21.31 q13.12 Seq+ 101416 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF226-EIF3K ZNF226 chr19 44165807 + EIF3K chr19 38620337 + Exonic hg38 SARC TCGA-DX-A8BL-01A 11 122 5'UTR-3'UTR Intra-chr q13.31 Transcription factor Seq+ 101417 ChimerSeq TCGA FAWG TCGA_RNA-Seq HAUS8-QTRT1 HAUS8 chr19 17073274 - QTRT1 chr19 10712161 + Exonic hg38 SARC TCGA-DX-A8BL-01A 5 106 In-Frame Intra-chr p13.11 p13.2 Seq+ 101418 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPE-TMED1 COPE chr19 18912984 - TMED1 chr19 10835353 - Exonic hg38 SARC TCGA-DX-A8BL-01A 9 27 In-Frame Intra-chr p13.11 p13.2 Seq+ 101419 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC50-LSAMP CCDC50 chr3 191370036 + LSAMP chr3 116444955 - Exonic hg38 SARC TCGA-DX-A8BL-01A 6 28 Out-of-frame Intra-chr q28 q13.31 Tumor suppressor gene Seq+ 101420 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLEC3B-POMGNT2 CLEC3B chr3 45030925 + POMGNT2 chr3 43081536 - Exonic hg38 SARC TCGA-DX-A8BL-01A 2 36 CDS-5'UTR Intra-chr p21.31 p22.1 101421 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM6A-SSX1 KDM6A chrX 44873987 + SSX1 chrX 48257222 + Exonic hg38 SARC TCGA-DX-A8BL-01A 4 13 5'UTR-5'UTR Intra-chr p11.3 Oncogene Tumor suppressor gene p11.23 Oncogene 101422 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAP-FAM198A SCAP chr3 47435008 - FAM198A chr3 43032267 + Exonic hg38 SARC TCGA-DX-A8BL-01A 3 15 Out-of-frame Intra-chr p21.31 p22.1 101423 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID3A-RFX2 ARID3A chr19 929277 + RFX2 chr19 6093947 - Exonic hg38 SARC TCGA-DX-A8BL-01A 4 4 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Transcription factor 101424 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATAD2A-KXD1 GATAD2A chr19 19406019 + KXD1 chr19 18562036 + Exonic hg38 SARC TCGA-DX-A8BL-01A 2 10 5'UTR-5'UTR Intra-chr p13.11 Transcription factor p13.11 101425 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM161A-TIMM44 TMEM161A chr19 19130156 - TIMM44 chr19 7935145 - Exonic hg38 SARC TCGA-DX-A8BL-01A 3 3 Out-of-frame Intra-chr p13.11 p13.2 Seq+ 101426 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIVEP2-RSPO3 HIVEP2 chr6 142945944 - RSPO3 chr6 127148648 + Exonic hg38 SARC TCGA-DX-A8BL-01A 2 3 5'UTR-CDS Intra-chr q24.2 Transcription factor q22.33 101427 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGPEP1-GTF2F1 PGPEP1 chr19 18356011 + GTF2F1 chr19 6389637 - Exonic hg38 SARC TCGA-DX-A8BL-01A 1 6 In-Frame Intra-chr p13.11 p13.3 101428 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUGP1-TMEM221 SUGP1 chr19 19296989 - TMEM221 chr19 17436927 - Exonic hg38 SARC TCGA-DX-A8BL-01A 1 5 In-Frame Intra-chr p13.11 p13.11 Seq+ 101429 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKIG-TOP1 PKIG chr20 44598890 + TOP1 chr20 41112782 + Exonic hg38 SARC TCGA-DX-A8BL-01A 1 2 5'UTR-CDS Intra-chr q13.12 q12 Oncogene 101430 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF586-AATF ZNF586 chr19 57769878 + AATF chr17 37056601 + Exonic hg38 SARC TCGA-DX-A8BM-01A 48 310 CDS-3'UTR Inter-chr q13.43 Transcription factor Seq+ 101431 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF704-RPS18 ZNF704 chr8 80873544 - RPS18 chr6 33272628 + Exonic hg38 SARC TCGA-DX-A8BM-01A 28 88 CDS-3'UTR Inter-chr q21.13 Transcription factor 101432 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNRNP70-CTNNA2 SNRNP70 chr19 49090520 + CTNNA2 chr2 79339720 + Exonic hg38 SARC TCGA-DX-A8BM-01A 13 52 CDS-5'UTR Inter-chr q13.33 p12 Tumor suppressor gene 101433 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT10-LRCH1 SEPT10 chr2 109585721 - LRCH1 chr13 46681741 + Exonic hg38 SARC TCGA-DX-A8BM-01A 10 23 Out-of-frame Inter-chr q13 q14.13 Seq+ 101434 ChimerSeq TCGA FAWG TCGA_RNA-Seq PMP22-TEKT3 PMP22 chr17 15239471 - TEKT3 chr17 15304152 - Exonic hg38 SARC TCGA-DX-A8BM-01A 9 20 Out-of-frame Intra-chr p12 p12 101435 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPPL2A-FAM81A SPPL2A chr15 50765468 - FAM81A chr15 59492271 + Exonic hg38 SARC TCGA-DX-A8BM-01A 3 35 In-Frame Intra-chr q21.2 q22.2 101436 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIO-CTNNA2 TRIO chr5 14336727 + CTNNA2 chr2 79293187 + Exonic hg38 SARC TCGA-DX-A8BM-01A 5 19 5'UTR-5'UTR Inter-chr p15.2 p12 Tumor suppressor gene 101437 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBGCP2-SORBS1 TUBGCP2 chr10 133297952 - SORBS1 chr10 95384285 - Exonic hg38 SARC TCGA-DX-A8BM-01A 5 12 In-Frame Intra-chr q26.3 q24.1 Seq+ 101438 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA11-ADAMTSL3 ITGA11 chr15 68313779 - ADAMTSL3 chr15 83961573 + Exonic hg38 SARC TCGA-DX-A8BM-01A 3 16 Out-of-frame Intra-chr q23 q25.2 Seq+ 101439 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP1B2-SLC37A3 ATP1B2 chr17 7651630 + SLC37A3 chr7 140337349 - Exonic hg38 SARC TCGA-DX-A8BM-01A 2 10 In-Frame Inter-chr p13.1 q34 Seq+ 101440 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF511-PLPP4 ZNF511 chr10 133311841 + PLPP4 chr10 120503818 + Exonic hg38 SARC TCGA-DX-A8BM-01A 3 5 In-Frame Intra-chr q26.3 Transcription factor q26.12 101441 ChimerSeq TCGA FAWG TCGA_RNA-Seq CORO2B-APH1B CORO2B chr15 68719552 + APH1B chr15 63279161 + Exonic hg38 SARC TCGA-DX-A8BM-01A 3 4 Out-of-frame Intra-chr q23 q22.2 101442 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASAL2-RHBDF1 RASAL2 chr1 178300118 + RHBDF1 chr16 65039 - Exonic hg38 SARC TCGA-DX-A8BM-01A 3 4 CDS-5'UTR Inter-chr q25.2 Tumor suppressor gene p13.3 Seq+ 101443 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN9-SLC12A1 PTPN9 chr15 75578714 - SLC12A1 chr15 48249575 + Exonic hg38 SARC TCGA-DX-A8BM-01A 2 5 Out-of-frame Intra-chr q24.2 q21.1 Seq+ 101444 ChimerSeq TCGA FAWG TCGA_RNA-Seq MREG-DNAH2 MREG chr2 216013233 - DNAH2 chr17 7830300 + Exonic hg38 SARC TCGA-DX-A8BM-01A 1 8 Out-of-frame Inter-chr q35 p13.1 Seq+ 101445 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPBL-SPEF2 NIPBL chr5 36976402 + SPEF2 chr5 35628460 + Exonic hg38 SARC TCGA-DX-A8BM-01A 2 3 In-Frame Intra-chr p13.2 p13.2 Seq+ 101446 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANBP2-RAPGEF4 RANBP2 chr2 108719678 + RAPGEF4 chr2 172795025 + Exonic hg38 SARC TCGA-DX-A8BM-01A 2 2 Out-of-frame Intra-chr q13 q31.1 101447 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRAF-MED4 BRAF chr7 140801412 - MED4 chr13 48090418 - Exonic hg38 SARC TCGA-DX-A8BM-01A 2 1 In-Frame Inter-chr q34 TKL:RAF Oncogene q14.2 101448 ChimerSeq TCGA FAWG TCGA_RNA-Seq BBS9-ALG6 BBS9 chr7 33155702 + ALG6 chr1 63370771 + Exonic hg38 SARC TCGA-DX-A8BM-01A 1 2 5'UTR-5'UTR Inter-chr p14.3 p31.3 101449 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL4R-ACMSD IL4R chr16 27314020 + ACMSD chr2 134898341 + Exonic hg38 SARC TCGA-DX-A8BN-01A 2 402 5'UTR-CDS Inter-chr p12.1 q21.3 Seq+ 101450 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0355-SLC7A9 KIAA0355 chr19 34349153 + SLC7A9 chr19 32833323 - Exonic hg38 SARC TCGA-DX-A8BN-01A 28 82 3'UTR-CDS Intra-chr q13.11 Seq+ 101451 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAA38-ITFG1 NAA38 chr17 7883235 - ITFG1 chr16 47375940 - Exonic hg38 SARC TCGA-DX-A8BN-01A 15 43 5'UTR-CDS Inter-chr p13.1 q12.1 101452 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL22-ITFG1 METTL22 chr16 8647790 + ITFG1 chr16 47375940 - Exonic hg38 SARC TCGA-DX-A8BN-01A 11 25 3'UTR-CDS Intra-chr p13.2 q12.1 101453 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF771-VKORC1 ZNF771 chr16 30408194 + VKORC1 chr16 31093482 - Exonic hg38 SARC TCGA-DX-A8BN-01A 1 6 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 101454 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBA2-LRP3 UBA2 chr19 34467014 + LRP3 chr19 33196730 + Exonic hg38 SARC TCGA-DX-A8BN-01A 1 5 In-Frame Intra-chr q13.11 q13.11 101455 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTMR3-HORMAD2 MTMR3 chr22 30013473 + HORMAD2 chr22 30080174 + Exonic hg38 SARC TCGA-DX-A8BN-01A 1000 1000 Out-of-frame Intra-chr q12.2 q12.2 Seq+ 101456 ChimerSeq TCGA FAWG TCGA_RNA-Seq FLCN-COPS3 FLCN chr17 17236912 - COPS3 chr17 17249039 - Exonic hg38 SARC TCGA-DX-A8BO-01A 2 7 5'UTR-CDS Intra-chr p11.2 Oncogene Tumor suppressor gene p11.2 Seq+ 101457 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF2-KAT8 SMURF2 chr17 64593440 - KAT8 chr16 31117463 + Exonic hg38 SARC TCGA-DX-A8BQ-01A 30 174 CDS-5'UTR Inter-chr q24.1 p11.2 101458 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP3-EXOSC9 AGAP3 chr7 151087072 + EXOSC9 chr4 121801827 + Exonic hg38 SARC TCGA-DX-A8BR-01A 38 106 Out-of-frame Inter-chr q36.1 q27 Seq+ 101459 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP205-GIMAP8 NUP205 chr7 135607371 + GIMAP8 chr7 150474012 + Exonic hg38 SARC TCGA-DX-A8BR-01A 2 22 Out-of-frame Intra-chr q33 q36.1 Seq+ 101460 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNIP2-EXOC4 FNIP2 chr4 158769319 + EXOC4 chr7 133937891 + Exonic hg38 SARC TCGA-DX-A8BR-01A 2 16 In-Frame Inter-chr q32.1 q33 Seq+ 101461 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPCS3-SKAP2 SPCS3 chr4 176324257 + SKAP2 chr7 26690362 - Exonic hg38 SARC TCGA-DX-A8BR-01A 1 20 Out-of-frame Inter-chr q34.2 p15.2 101462 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL3-AOC1 OSBPL3 chr7 24979886 - AOC1 chr7 150856455 + Exonic hg38 SARC TCGA-DX-A8BR-01A 1 19 5'UTR-5'UTR Intra-chr p15.3 q36.1 101463 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGSM3-PPP6R2 SGSM3 chr22 40370688 + PPP6R2 chr22 50432265 + Exonic hg38 SARC TCGA-DX-A8BR-01A 2 11 5'UTR-CDS Intra-chr q13.1 q13.33 Seq+ 101464 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRID2-TRPC2 GRID2 chr4 93085279 + TRPC2 chr11 3609904 + Exonic hg38 SARC TCGA-DX-A8BR-01A 3 6 CDS-5'UTR Inter-chr q22.1 p15.4 101465 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP5-DLEU7 ARHGAP5 chr14 32117287 + DLEU7 chr13 50713240 - Exonic hg38 SARC TCGA-DX-A8BR-01A 2 6 Out-of-frame Inter-chr q12 q14.3 101466 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC14-RNF212B CCDC14 chr3 123931102 - RNF212B chr14 23193325 + Exonic hg38 SARC TCGA-DX-A8BR-01A 2 6 CDS-5'UTR Inter-chr q21.1 q11.2 101467 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP98-AKR1C7P NUP98 chr11 3679554 - AKR1C7P chr10 5286012 - Exonic hg38 SARC TCGA-DX-A8BR-01A 1 9 Out-of-frame Inter-chr p15.4 Oncogene Tumor suppressor gene p15.1 101468 ChimerSeq TCGA FAWG TCGA_RNA-Seq HECTD1-NSUN3 HECTD1 chr14 31148721 - NSUN3 chr3 94081609 + Exonic hg38 SARC TCGA-DX-A8BR-01A 1 8 Out-of-frame Inter-chr q12 q11.2 101469 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL3-TMEM176A OSBPL3 chr7 24979886 - TMEM176A chr7 150804827 + Exonic hg38 SARC TCGA-DX-A8BR-01A 2 4 5'UTR-CDS Intra-chr p15.3 q36.1 101470 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEFSEC-CD96 EEFSEC chr3 128264781 + CD96 chr3 111567523 + Exonic hg38 SARC TCGA-DX-A8BR-01A 2 3 3'UTR-CDS Intra-chr q21.3 q13.13 Seq+ 101471 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL9-DCAF6 BCL9 chr1 147612977 + DCAF6 chr1 168019545 + Exonic hg38 SARC TCGA-DX-A8BR-01A 1 3 CDS-5'UTR Intra-chr q21.2 Oncogene q24.2 101472 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLG1-CBFA2T2 DLG1 chr3 197282679 - CBFA2T2 chr20 33644347 + Exonic hg38 SARC TCGA-DX-A8BS-01A 26 39 In-Frame Inter-chr q29 Tumor suppressor gene q11.21 Seq+ 101473 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBFA2T2-BCL2L1 CBFA2T2 chr20 33490301 + BCL2L1 chr20 31666086 - Exonic hg38 SARC TCGA-DX-A8BS-01A 8 19 Out-of-frame Intra-chr q11.21 q11.21 Oncogene Seq+ 101474 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPM7-TEPP TRPM7 chr15 50662967 - TEPP chr16 57984303 + Exonic hg38 SARC TCGA-DX-A8BS-01A 6 25 Out-of-frame Inter-chr q21.2 q21 Seq+ 101475 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUPT16H-BRMS1 SUPT16H chr14 21374702 - BRMS1 chr11 66340866 - Exonic hg38 SARC TCGA-DX-A8BS-01A 6 23 Out-of-frame Inter-chr q11.2 q13.2 Tumor suppressor gene Seq+ 101476 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPP-FRG2FP LPP chr3 188225527 + FRG2FP chr3 198110284 + Exonic hg38 SARC TCGA-DX-A8BS-01A 3 30 Out-of-frame Intra-chr q27.3 Oncogene q29 101477 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYRF-STX5 MYRF chr11 61752790 + STX5 chr11 62807628 - Exonic hg38 SARC TCGA-DX-A8BS-01A 6 12 Out-of-frame Intra-chr q12.2 Transcription factor q12.3 Seq+ 101478 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPPL3-HVCN1 SPPL3 chr12 120903845 - HVCN1 chr12 110683264 - Exonic hg38 SARC TCGA-DX-A8BS-01A 8 2 CDS-5'UTR Intra-chr q24.31 q24.11 Seq+ 101479 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL2L1-TPX2 BCL2L1 chr20 31721844 - TPX2 chr20 31757407 + Exonic hg38 SARC TCGA-DX-A8BS-01A 2 8 3'UTR-5'UTR Intra-chr q11.21 Oncogene q11.21 Seq+ 101480 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC91-TRDN CCDC91 chr12 28362515 + TRDN chr6 123274670 - Exonic hg38 SARC TCGA-DX-A8BS-01A 2 4 Out-of-frame Inter-chr p11.22 q22.31 Seq+ 101481 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK1-STK32C DOCK1 chr10 126905563 + STK32C chr10 132245955 - Exonic hg38 SARC TCGA-DX-A8BT-01A 26 90 In-Frame Intra-chr q26.2 q26.3 Seq+ 101482 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD2-FBN1 NSD2 chr4 1904378 + FBN1 chr15 48422068 - Exonic hg38 SARC TCGA-DX-A8BT-01A 8 20 In-Frame Inter-chr p16.3 q21.1 101483 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53-PFKL TP53 chr17 7687377 - PFKL chr21 44306681 + Exonic hg38 SARC TCGA-DX-A8BT-01A 7 20 5'UTR-CDS Inter-chr p13.1 Oncogene Tumor suppressor gene Transcription factor q22.3 101484 ChimerSeq TCGA FAWG TCGA_RNA-Seq CENPI-LANCL3 CENPI chrX 101148161 + LANCL3 chrX 37655688 + Exonic hg38 SARC TCGA-DX-A8BT-01A 5 24 In-Frame Intra-chr q22.1 p21.1 101485 ChimerSeq TCGA FAWG TCGA_RNA-Seq IDH3A-DHX32 IDH3A chr15 78160206 + DHX32 chr10 125838387 - Exonic hg38 SARC TCGA-DX-A8BT-01A 2 10 Out-of-frame Inter-chr q25.1 q26.2 Seq+ 101486 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRMS1L-NPAS3 BRMS1L chr14 35834923 + NPAS3 chr14 33560121 + Exonic hg38 SARC TCGA-DX-A8BT-01A 1 5 In-Frame Intra-chr q13.2 q13.1 Transcription factor Seq+ 101487 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF224-CYP2S1 ZNF224 chr19 44097888 + CYP2S1 chr19 41205958 + Exonic hg38 SARC TCGA-DX-A8BU-01A 11 56 In-Frame Intra-chr q13.31 Transcription factor q13.2 Seq+ 101488 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAE1-HAS1 SAE1 chr19 47131028 + HAS1 chr19 51719895 - Exonic hg38 SARC TCGA-DX-A8BU-01A 9 52 Out-of-frame Intra-chr q13.32 q13.41 Seq+ 101489 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEAD3-ZFAND3 TEAD3 chr6 35496898 - ZFAND3 chr6 38116572 + Exonic hg38 SARC TCGA-DX-A8BU-01A 9 24 5'UTR-CDS Intra-chr p21.31 Transcription factor p21.2 Seq+ 101490 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFKB1-BANK1 NFKB1 chr4 102594981 + BANK1 chr4 102063075 + Exonic hg38 SARC TCGA-DX-A8BU-01A 5 18 Out-of-frame Intra-chr q24 Oncogene Tumor suppressor gene Transcription factor q24 Seq+ 101491 ChimerSeq TCGA FAWG TCGA_RNA-Seq TGFBRAP1-DPP10 TGFBRAP1 chr2 105296356 - DPP10 chr2 114707117 + Exonic hg38 SARC TCGA-DX-A8BU-01A 3 12 Out-of-frame Intra-chr q12.2 q14.1 Seq+ 101492 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFF1-GPRIN3 AFF1 chr4 87007424 + GPRIN3 chr4 89250233 - Exonic hg38 SARC TCGA-DX-A8BU-01A 2 14 5'UTR-5'UTR Intra-chr q21.3 Oncogene q22.1 Seq+ 101493 ChimerSeq TCGA FAWG TCGA_RNA-Seq LSM14A-ZNF221 LSM14A chr19 34196763 + ZNF221 chr19 43962725 + Exonic hg38 SARC TCGA-DX-A8BU-01A 2 14 3'UTR-5'UTR Intra-chr q13.31 Transcription factor Seq+ 101494 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF13A-UBE2K KIF13A chr6 17987054 - UBE2K chr4 39774834 + Exonic hg38 SARC TCGA-DX-A8BU-01A 3 8 In-Frame Inter-chr p22.3 p14 Seq+ 101495 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDLRAD3-DEPDC7 LDLRAD3 chr11 36098461 + DEPDC7 chr11 33033262 + Exonic hg38 SARC TCGA-DX-A8BU-01A 2 12 In-Frame Intra-chr p13 p13 Seq+ 101496 ChimerSeq TCGA FAWG TCGA_RNA-Seq HM13-DLGAP4 HM13 chr20 31527582 + DLGAP4 chr20 36442727 + Exonic hg38 SARC TCGA-DX-A8BU-01A 1 9 In-Frame Intra-chr q11.21 q11.23 101497 ChimerSeq TCGA FAWG TCGA_RNA-Seq SVIL-STAM SVIL chr10 29657969 - STAM chr10 17660464 + Exonic hg38 SARC TCGA-DX-A8BU-01A 1 8 5'UTR-5'UTR Intra-chr p11.23 p12.33 Seq+ 101498 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDLIM5-STPG2 PDLIM5 chr4 94640450 + STPG2 chr4 97187833 - Exonic hg38 SARC TCGA-DX-A8BU-01A 1 5 CDS-3'UTR Intra-chr q22.3 q23 101499 ChimerSeq TCGA FAWG TCGA_RNA-Seq FECH-WDR7 FECH chr18 57585864 - WDR7 chr18 56962430 + Exonic hg38 SARC TCGA-DX-A8BU-01A 1 3 Out-of-frame Intra-chr q21.31 q21.31 101500 ChimerSeq TCGA FAWG TCGA_RNA-Seq UQCC1-ASXL1 UQCC1 chr20 35347164 - ASXL1 chr20 32428128 + Exonic hg38 SARC TCGA-DX-A8BU-01A 1 3 In-Frame Intra-chr q11.22 q11.21 Oncogene Tumor suppressor gene 101501 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMYD3-PIP SMYD3 chr1 246507054 - PIP chr7 143135194 + Exonic hg38 SARC TCGA-DX-A8BU-01A 1 2 In-Frame Inter-chr q44 Transcription factor q34 101502 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCLK1-CLDN10 DCLK1 chr13 36111869 - CLDN10 chr13 95560132 + Exonic hg38 SARC TCGA-DX-A8BV-01A 2 28 Out-of-frame Intra-chr q13.3 CAMK:DCAMKL q32.1 Seq+ 101503 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHM2-ECE1 PLEKHM2 chr1 15718625 + ECE1 chr1 21247363 - Exonic hg38 SARC TCGA-DX-A8BV-01A 1 28 In-Frame Intra-chr p36.21 p36.12 101504 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM5B-PPP1R12B KDM5B chr1 202773118 - PPP1R12B chr1 202567778 + Exonic hg38 SARC TCGA-DX-A8BV-01A 3 16 In-Frame Intra-chr q32.1 Transcription factor q32.1 Seq+ 101505 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID4B-KLHL12 ARID4B chr1 235326914 - KLHL12 chr1 202925207 - Exonic hg38 SARC TCGA-DX-A8BV-01A 2 6 In-Frame Intra-chr q42.3 q32.1 Seq+ 101506 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC28-YPEL1 TTC28 chr22 28629552 - YPEL1 chr22 21701218 - Exonic hg38 SARC TCGA-DX-A8BV-01A 2 6 In-Frame Intra-chr q12.1 q11.22 101507 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRRF-NR4A1 MRRF chr9 122264938 + NR4A1 chr12 52054327 + Exonic hg38 SARC TCGA-DX-A8BV-01A 1 3 5'UTR-5'UTR Inter-chr q33.2 q13.13 Tumor suppressor gene Transcription factor Seq+ 101508 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIP12-ITM2C TRIP12 chr2 229858772 - ITM2C chr2 230873417 + Exonic hg38 SARC TCGA-DX-A8BX-01A 22 53 Out-of-frame Intra-chr q36.3 q37.1 Seq+ 101509 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAB39-RHBDD1 CAB39 chr2 230760115 + RHBDD1 chr2 226995431 + Exonic hg38 SARC TCGA-DX-A8BX-01A 5 55 Out-of-frame Intra-chr q37.1 q36.3 Seq+ 101510 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC92-RPL7 CCDC92 chr12 123972529 - RPL7 chr8 73292797 - Exonic hg38 SARC TCGA-DX-A8BX-01A 11 16 5'UTR-5'UTR Inter-chr q21.11 101511 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFPM2-SLC27A2 ZFPM2 chr8 105318981 + SLC27A2 chr15 50197500 + Exonic hg38 SARC TCGA-DX-A8BX-01A 11 16 In-Frame Inter-chr q22.3 Transcription factor q21.2 Seq+ 101512 ChimerSeq TCGA FAWG TCGA_RNA-Seq HAUS2-TMPRSS12 HAUS2 chr15 42548965 + TMPRSS12 chr12 50885246 + Exonic hg38 SARC TCGA-DX-A8BX-01A 6 18 Out-of-frame Inter-chr q15.2 q13.12 101513 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUSC2-TCAF1P1 RUSC2 chr9 35490172 + TCAF1P1 chr7 143602774 + Exonic hg38 SARC TCGA-DX-A8BX-01A 10 0 Out-of-frame Inter-chr p13.3 q35 101514 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL11-ARMC9 RPL11 chr1 23694791 + ARMC9 chr2 231360754 + Exonic hg38 SARC TCGA-DX-A8BX-01A 3 7 Out-of-frame Inter-chr p36.11 Tumor suppressor gene q37.1 101515 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAIP2-QKI PAIP2 chr5 139364743 + QKI chr6 163563420 + Exonic hg38 SARC TCGA-DX-A8BX-01A 2 9 Out-of-frame Inter-chr q31.2 Tumor suppressor gene q26 101516 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13B-SPAG1 VPS13B chr8 99275254 + SPAG1 chr8 100191390 + Exonic hg38 SARC TCGA-DX-A8BX-01A 1 7 In-Frame Intra-chr q22.2 q22.2 Seq+ 101517 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIAPH2-PLAC1 DIAPH2 chrX 96758258 + PLAC1 chrX 134602122 - Exonic hg38 SARC TCGA-DX-A8BZ-01A 1 4 CDS-5'UTR Intra-chr q21.33 q26.3 Seq+ 101518 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP6-ADGRB3 SENP6 chr6 75602576 + ADGRB3 chr6 69354233 + Exonic hg38 SARC TCGA-DX-AATS-01A 4 28 Out-of-frame Intra-chr q14.1 q12 Oncogene 101519 ChimerSeq TCGA FAWG TCGA_RNA-Seq AACS-ADGRA1 AACS chr12 125091523 + ADGRA1 chr10 133131269 + Exonic hg38 SARC TCGA-DX-AATS-01A 5 13 CDS-3'UTR Inter-chr q24.31 q26.3 101520 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACSF3-ZNF483 ACSF3 chr16 89146049 + ZNF483 chr9 111576365 + Exonic hg38 SARC TCGA-DX-AATS-01A 5 9 Out-of-frame Inter-chr q24.3 q31.3 Transcription factor Seq+ 101521 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM120A-SUSD1 FAM120A chr9 93527242 + SUSD1 chr9 112041960 - Exonic hg38 SARC TCGA-DX-AATS-01A 2 16 In-Frame Intra-chr q22.31 q32 Seq+ 101522 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLG1-WDR60 DLG1 chr3 197081051 - WDR60 chr7 158918740 + Exonic hg38 SARC TCGA-DX-AATS-01A 2 15 In-Frame Inter-chr q29 Tumor suppressor gene q36.3 Seq+ 101523 ChimerSeq TCGA FAWG TCGA_RNA-Seq SS18-ZNF521 SS18 chr18 26087501 - ZNF521 chr18 25092081 - Exonic hg38 SARC TCGA-DX-AATS-01A 2 13 Out-of-frame Intra-chr q11.2 q11.2 Oncogene Transcription factor Seq+ 101524 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM135A-GRM1 FAM135A chr6 70502791 + GRM1 chr6 146027648 + Exonic hg38 SARC TCGA-DX-AATS-01A 3 8 5'UTR-5'UTR Intra-chr q13 q24.3 Seq+ 101525 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYM-OAS3 DYM chr18 49460398 - OAS3 chr12 112941570 + Exonic hg38 SARC TCGA-DX-AATS-01A 2 11 5'UTR-CDS Inter-chr q21.1 q24.13 Seq+ 101526 ChimerSeq TCGA FAWG TCGA_RNA-Seq APP-MIR548XHG APP chr21 25954590 - MIR548XHG chr21 18589620 - Exonic hg38 SARC TCGA-DX-AATS-01A 1 14 CDS-3'UTR Intra-chr q21.3 q21.1 101527 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFYC-FAF1 NFYC chr1 40691867 + FAF1 chr1 50491801 - Exonic hg38 SARC TCGA-DX-AATS-01A 1 13 5'UTR-CDS Intra-chr p34.2 Transcription factor p32.3 Seq+ 101528 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAK2-AP1S3 TRAK2 chr2 201420417 - AP1S3 chr2 223777869 - Exonic hg38 SARC TCGA-DX-AATS-01A 4 1 Out-of-frame Intra-chr q33.1 q36.1 Seq+ 101529 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBR2-CDKAL1 UBR2 chr6 42658824 + CDKAL1 chr6 20548593 + Exonic hg38 SARC TCGA-DX-AATS-01A 1 12 In-Frame Intra-chr p21.1 p22.3 Seq+ 101530 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4A-FAF1 KDM4A chr1 43698013 + FAF1 chr1 50491801 - Exonic hg38 SARC TCGA-DX-AATS-01A 3 3 In-Frame Intra-chr p34.2 p32.3 Seq+ 101531 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEO1-BBS4 NEO1 chr15 73136027 + BBS4 chr15 72709700 + Exonic hg38 SARC TCGA-DX-AATS-01A 2 6 In-Frame Intra-chr q24.1 q24.1 Seq+ 101532 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPA-MUSK PTPA chr9 129142552 + MUSK chr9 110747641 + Exonic hg38 SARC TCGA-DX-AATS-01A 2 5 In-Frame Intra-chr q34.11 Tumor suppressor gene q31.3 TK:Musk 101533 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSPB8-INIP HSPB8 chr12 119179679 + INIP chr9 112694233 - Exonic hg38 SARC TCGA-DX-AATS-01A 2 4 In-Frame Inter-chr q24.23 q32 Seq+ 101534 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPS1-PLEKHM3 CPS1 chr2 210616541 + PLEKHM3 chr2 207828496 - Exonic hg38 SARC TCGA-DX-AATS-01A 2 3 In-Frame Intra-chr q34 q33.3 Seq+ 101535 ChimerSeq TCGA FAWG TCGA_RNA-Seq AK4-WLS AK4 chr1 65148552 + WLS chr1 68159247 - Exonic hg38 SARC TCGA-DX-AATS-01A 1 5 In-Frame Intra-chr p31.3 p31.3 101536 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLF7-PLEKHM3 KLF7 chr2 207165467 - PLEKHM3 chr2 207828496 - Exonic hg38 SARC TCGA-DX-AATS-01A 1 4 Out-of-frame Intra-chr q33.3 Transcription factor q33.3 101537 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFLNA-SH3BP4 RFLNA chr12 123974020 + SH3BP4 chr2 234995303 + Exonic hg38 SARC TCGA-DX-AATS-01A 1 4 5'UTR-5'UTR Inter-chr q24.31 q37.2 101538 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF664-SH3BP4 ZNF664 chr12 123974020 + SH3BP4 chr2 234995303 + Exonic hg38 SARC TCGA-DX-AATS-01A 1 4 5'UTR-5'UTR Inter-chr q24.31 Transcription factor q37.2 Seq+ 101539 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDFY1-NYAP2 WDFY1 chr2 223945148 - NYAP2 chr2 225651432 + Exonic hg38 SARC TCGA-DX-AATS-01A 1 3 Out-of-frame Intra-chr q36.1 q36.3 101540 ChimerSeq TCGA FAWG TCGA_RNA-Seq MFSD14A-SEC22B MFSD14A chr1 100038316 + SEC22B chr1 120168949 - Exonic hg38 SARC TCGA-DX-AATS-01A 1 2 In-Frame Intra-chr p21.2 p12 101541 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANGPT1-TNFRSF11B ANGPT1 chr8 107497262 - TNFRSF11B chr8 118933300 - Exonic hg38 SARC TCGA-DX-AB2E-01A 31 116 In-Frame Intra-chr q23.1 q24.12 Seq+ 101542 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEC-JPH1 PLEC chr8 143938151 - JPH1 chr8 74259503 - Exonic hg38 SARC TCGA-DX-AB2E-01A 4 12 Out-of-frame Intra-chr q24.3 q21.11 Seq+ 101543 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-SPATC1 PVT1 chr8 127796008 + SPATC1 chr8 144041232 + Exonic hg38 SARC TCGA-DX-AB2E-01A 1 22 5'UTR-CDS Intra-chr q24.21 q24.3 101544 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLLT3-BNC2 MLLT3 chr9 20620654 - BNC2 chr9 16437524 - Exonic hg38 SARC TCGA-DX-AB2E-01A 4 6 Out-of-frame Intra-chr p21.3 p22.2 Transcription factor Seq+ 101545 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAPGEF1-REXO4 RAPGEF1 chr9 131739770 - REXO4 chr9 133412921 - Exonic hg38 SARC TCGA-DX-AB2E-01A 4 6 CDS-5'UTR Intra-chr q34.13 Transcription factor Seq+ 101546 ChimerSeq TCGA FAWG TCGA_RNA-Seq BNC2-UHRF2 BNC2 chr9 16870646 - UHRF2 chr9 6420912 + Exonic hg38 SARC TCGA-DX-AB2E-01A 1 2 In-Frame Intra-chr p22.2 Transcription factor p24.1 Tumor suppressor gene 101547 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELK3-TSPAN8 ELK3 chr12 96194705 + TSPAN8 chr12 71282819 - Exonic hg38 SARC TCGA-DX-AB2F-01A 191 1907 5'UTR-5'UTR Intra-chr q23.1 Transcription factor q21.1 Seq+ 101548 ChimerSeq TCGA FAWG TCGA_RNA-Seq OS9-COX7B OS9 chr12 57696373 + COX7B chrX 77899477 + Exonic hg38 SARC TCGA-DX-AB2F-01A 95 272 CDS-5'UTR Inter-chr q13.3 q21.1 101549 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM2-RAP1B R3HDM2 chr12 57395749 - RAP1B chr12 68648699 + Exonic hg38 SARC TCGA-DX-AB2F-01A 38 136 5'UTR-5'UTR Intra-chr q13.3 q15 101550 ChimerSeq TCGA FAWG TCGA_RNA-Seq UHRF1BP1L-TRHDE UHRF1BP1L chr12 100142592 - TRHDE chr12 72286681 + Exonic hg38 SARC TCGA-DX-AB2F-01A 23 63 In-Frame Intra-chr q23.1 q21.1 Seq+ 101551 ChimerSeq TCGA FAWG TCGA_RNA-Seq LEMD3-KCNC2 LEMD3 chr12 65218619 + KCNC2 chr12 75051317 - Exonic hg38 SARC TCGA-DX-AB2F-01A 18 78 In-Frame Intra-chr q14.3 q21.1 Seq+ 101552 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAV3-CYSLTR1 NAV3 chr12 78059115 + CYSLTR1 chrX 78327439 - Exonic hg38 SARC TCGA-DX-AB2F-01A 17 38 CDS-5'UTR Inter-chr q21.2 q21.1 101553 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNDC3B-FGF12 FNDC3B chr3 172133546 + FGF12 chr3 192360538 - Exonic hg38 SARC TCGA-DX-AB2F-01A 11 50 In-Frame Intra-chr q26.31 q29 Seq+ 101554 ChimerSeq TCGA FAWG TCGA_RNA-Seq CFAP54-NAV3 CFAP54 chr12 96598767 + NAV3 chr12 78146369 + Exonic hg38 SARC TCGA-DX-AB2F-01A 9 44 In-Frame Intra-chr q23.1 q21.2 101555 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAV3-CDH4 NAV3 chr12 78159286 + CDH4 chr20 61894910 + Exonic hg38 SARC TCGA-DX-AB2F-01A 8 41 CDS-3'UTR Inter-chr q21.2 q13.33 Tumor suppressor gene 101556 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC14-TSPAN8 ZDHHC14 chr6 157382266 + TSPAN8 chr12 71282819 - Exonic hg38 SARC TCGA-DX-AB2F-01A 6 27 CDS-5'UTR Inter-chr q25.3 q21.1 Seq+ 101557 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIVEP2-MYRFL HIVEP2 chr6 142836935 - MYRFL chr12 69926571 + Exonic hg38 SARC TCGA-DX-AB2F-01A 6 22 5'UTR-CDS Inter-chr q24.2 Transcription factor q15 Transcription factor 101558 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDM2-FRS2 MDM2 chr12 68824651 + FRS2 chr12 69530865 + Exonic hg38 SARC TCGA-DX-AB2F-01A 7 12 CDS-5'UTR Intra-chr q15 Oncogene q15 101559 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAN1A1-MAGT1 MAN1A1 chr6 119290683 - MAGT1 chrX 77830895 - Exonic hg38 SARC TCGA-DX-AB2F-01A 7 8 Out-of-frame Inter-chr q22.31 q21.1 Seq+ 101560 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMM50-PIP4K2C SAMM50 chr22 43964553 + PIP4K2C chr12 57594025 + Exonic hg38 SARC TCGA-DX-AB2F-01A 6 9 In-Frame Inter-chr q13.31 q13.3 Seq+ 101561 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-CFAP54 FRS2 chr12 69532056 + CFAP54 chr12 96540837 + Exonic hg38 SARC TCGA-DX-AB2F-01A 1 22 5'UTR-CDS Intra-chr q15 q23.1 101562 ChimerSeq TCGA FAWG TCGA_RNA-Seq UST-PGK1 UST chr6 148964563 + PGK1 chrX 78096653 + Exonic hg38 SARC TCGA-DX-AB2F-01A 4 10 CDS-5'UTR Inter-chr q25.1 q21.1 101563 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP7A-PTPRR ATP7A chrX 77910835 + PTPRR chr12 70639277 - Exonic hg38 SARC TCGA-DX-AB2F-01A 2 17 5'UTR-CDS Inter-chr q21.1 q15 Seq+ 101564 ChimerSeq TCGA FAWG TCGA_RNA-Seq LGR5-TSPAN8 LGR5 chr12 71440292 + TSPAN8 chr12 71282819 - Exonic hg38 SARC TCGA-DX-AB2F-01A 1 14 5'UTR-5'UTR Intra-chr q21.1 q21.1 Seq+ 101565 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAN1A1-COX7B MAN1A1 chr6 119290683 - COX7B chrX 77905184 + Exonic hg38 SARC TCGA-DX-AB2F-01A 2 4 In-Frame Inter-chr q22.31 q21.1 101566 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D15-PDE10A TBC1D15 chr12 71880607 + PDE10A chr6 165396459 - Exonic hg38 SARC TCGA-DX-AB2F-01A 1 4 Out-of-frame Inter-chr q21.1 q27 101567 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE10A-DDX23 PDE10A chr6 165661947 - DDX23 chr12 48845782 - Exonic hg38 SARC TCGA-DX-AB2F-01A 1 3 5'UTR-5'UTR Inter-chr q27 q13.12 Seq+ 101568 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNY-FLT3LG CCNY chr10 35337207 + FLT3LG chr19 49476145 + Exonic hg38 SARC TCGA-DX-AB2F-01A 1 2 Out-of-frame Inter-chr p11.21 q13.33 101569 ChimerSeq TCGA FAWG TCGA_RNA-Seq MROH1-PARP10 MROH1 chr8 144200541 + PARP10 chr8 143986438 - Exonic hg38 SARC TCGA-DX-AB2F-01A 1 2 CDS-5'UTR Intra-chr q24.3 q24.3 101570 ChimerSeq TCGA FAWG TCGA_RNA-Seq SP1-NPFF SP1 chr12 53383622 + NPFF chr12 53507142 - Exonic hg38 SARC TCGA-DX-AB2G-01A 46 110 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 Seq+ 101571 ChimerSeq TCGA FAWG TCGA_RNA-Seq OS9-YEATS4 OS9 chr12 57696373 + YEATS4 chr12 69370706 + Exonic hg38 SARC TCGA-DX-AB2G-01A 31 114 In-Frame Intra-chr q13.3 q15 101572 ChimerSeq TCGA FAWG TCGA_RNA-Seq SP1-ATF7 SP1 chr12 53383622 + ATF7 chr12 53508027 - Exonic hg38 SARC TCGA-DX-AB2G-01A 18 120 CDS-3'UTR Intra-chr q13.13 Transcription factor q13.13 Transcription factor Seq+ 101573 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA2-KCNMB4 PPFIA2 chr12 81325777 - KCNMB4 chr12 70430485 + Exonic hg38 SARC TCGA-DX-AB2G-01A 16 75 In-Frame Intra-chr q21.31 q15 Seq+ 101574 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGA2-PCBP2 HMGA2 chr12 65838569 + PCBP2 chr12 53462493 + Exonic hg38 SARC TCGA-DX-AB2G-01A 7 68 In-Frame Intra-chr q14.3 Transcription factor q13.13 Seq+ 101575 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCN8A-FLJ12825 SCN8A chr12 51591359 + FLJ12825 chr12 54118604 + Exonic hg38 SARC TCGA-DX-AB2G-01A 13 19 5'UTR-5'UTR Intra-chr q13.13 q13.13 101576 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF1-PTPRR ATF1 chr12 50764307 + PTPRR chr12 70662605 - Exonic hg38 SARC TCGA-DX-AB2G-01A 12 14 5'UTR-CDS Intra-chr q13.12 Oncogene Transcription factor q15 101577 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAT6-PTPRQ STAT6 chr12 57104464 - PTPRQ chr12 80613592 + Exonic hg38 SARC TCGA-DX-AB2G-01A 3 19 Out-of-frame Intra-chr q13.3 Transcription factor q21.31 101578 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIO-CDH18 TRIO chr5 14420021 + CDH18 chr5 19612601 - Exonic hg38 SARC TCGA-DX-AB2G-01A 2 18 In-Frame Intra-chr p15.2 p14.3 Seq+ 101579 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP1-ATF1 LRP1 chr12 57145490 + ATF1 chr12 50795909 + Exonic hg38 SARC TCGA-DX-AB2G-01A 2 16 Out-of-frame Intra-chr q13.3 q13.12 Oncogene Transcription factor Seq+ 101580 ChimerSeq TCGA FAWG TCGA_RNA-Seq NTN4-LETMD1 NTN4 chr12 95786939 - LETMD1 chr12 51056350 + Exonic hg38 SARC TCGA-DX-AB2G-01A 4 7 In-Frame Intra-chr q22 q13.12 Seq+ 101581 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDM2-DIP2B MDM2 chr12 68813628 + DIP2B chr12 50660194 + Exonic hg38 SARC TCGA-DX-AB2G-01A 2 7 Out-of-frame Intra-chr q15 Oncogene q13.12 Seq+ 101582 ChimerSeq TCGA FAWG TCGA_RNA-Seq OS9-FRS2 OS9 chr12 57694323 + FRS2 chr12 69530865 + Exonic hg38 SARC TCGA-DX-AB2G-01A 2 6 CDS-5'UTR Intra-chr q13.3 q15 101583 ChimerSeq TCGA FAWG TCGA_RNA-Seq OTOGL-ACSS3 OTOGL chr12 80305695 + ACSS3 chr12 81216901 + Exonic hg38 SARC TCGA-DX-AB2G-01A 2 5 Out-of-frame Intra-chr q21.31 q21.31 101584 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH18-TERT CDH18 chr5 19612434 - TERT chr5 1282624 - Exonic hg38 SARC TCGA-DX-AB2G-01A 2 4 In-Frame Intra-chr p14.3 p15.33 Oncogene Seq+ 101585 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2B1-GRIP1 ATP2B1 chr12 89603043 - GRIP1 chr12 66541950 - Exonic hg38 SARC TCGA-DX-AB2G-01A 1 7 Out-of-frame Intra-chr q21.33 q14.3 Seq+ 101586 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHACTR2-IL26 PHACTR2 chr6 143678209 + IL26 chr12 68202083 - Exonic hg38 SARC TCGA-DX-AB2G-01A 2 3 Out-of-frame Inter-chr q24.2 q15 101587 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCN8A-PPFIA2 SCN8A chr12 51751593 + PPFIA2 chr12 81457866 - Exonic hg38 SARC TCGA-DX-AB2G-01A 1 6 In-Frame Intra-chr q13.13 q21.31 Seq+ 101588 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL21B-METTL7A METTL21B chr12 57773128 + METTL7A chr12 50924667 + Exonic hg38 SARC TCGA-DX-AB2G-01A 1 5 Out-of-frame Intra-chr q13.12 101589 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSRB3-CNOT2 MSRB3 chr12 65278865 + CNOT2 chr12 70335438 + Exonic hg38 SARC TCGA-DX-AB2H-01A 339 1479 In-Frame Intra-chr q14.3 q15 Seq+ 101590 ChimerSeq TCGA FAWG TCGA_RNA-Seq THAP2-YEATS4 THAP2 chr12 71664580 + YEATS4 chr12 69390147 + Exonic hg38 SARC TCGA-DX-AB2H-01A 217 361 Out-of-frame Intra-chr q21.1 Transcription factor q15 Seq+ 101591 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALNT1-TSFM B4GALNT1 chr12 57631915 - TSFM chr12 57792986 + Exonic hg38 SARC TCGA-DX-AB2H-01A 37 251 Out-of-frame Intra-chr q13.3 q14.1 Seq+ 101592 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF25-CPNE8 ARHGEF25 chr12 57614400 + CPNE8 chr12 38654070 - Exonic hg38 SARC TCGA-DX-AB2H-01A 51 177 In-Frame Intra-chr q13.3 q12 Seq+ 101593 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM2-KIF21A R3HDM2 chr12 57395749 - KIF21A chr12 39311553 - Exonic hg38 SARC TCGA-DX-AB2H-01A 32 81 5'UTR-CDS Intra-chr q13.3 q12 Seq+ 101594 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADSS-CAPRIN2 ADSS chr1 244415981 - CAPRIN2 chr12 30711629 - Exonic hg38 SARC TCGA-DX-AB2H-01A 31 38 Out-of-frame Inter-chr q44 p11.21 Seq+ 101595 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGA2-OSBPL8 HMGA2 chr12 65963372 + OSBPL8 chr12 76487618 - Exonic hg38 SARC TCGA-DX-AB2H-01A 17 76 3'UTR-5'UTR Intra-chr q14.3 Transcription factor q21.2 101596 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLG2-ATP23 DLG2 chr11 84163461 - ATP23 chr12 57945628 + Exonic hg38 SARC TCGA-DX-AB2H-01A 8 35 CDS-5'UTR Inter-chr q14.1 101597 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDK2-TMTC2 SDK2 chr17 73379177 - TMTC2 chr12 82857010 + Exonic hg38 SARC TCGA-DX-AB2H-01A 6 28 Out-of-frame Inter-chr q25.1 q21.31 Seq+ 101598 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNMB4-MUC19 KCNMB4 chr12 70400336 + MUC19 chr12 40493947 + Exonic hg38 SARC TCGA-DX-AB2H-01A 5 22 Out-of-frame Intra-chr q15 q12 101599 ChimerSeq TCGA FAWG TCGA_RNA-Seq B3GALNT2-LBR B3GALNT2 chr1 235470850 - LBR chr1 225424089 - Exonic hg38 SARC TCGA-DX-AB2H-01A 5 18 5'UTR-5'UTR Intra-chr q42.12 Seq+ 101600 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCYL3-TSPAN8 SCYL3 chr1 169888676 - TSPAN8 chr12 71157787 - Exonic hg38 SARC TCGA-DX-AB2H-01A 3 18 CDS-5'UTR Inter-chr q24.2 Other:SCY1 q21.1 Seq+ 101601 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRHDE-SFSWAP TRHDE chr12 72575542 + SFSWAP chr12 131764456 + Exonic hg38 SARC TCGA-DX-AB2H-01A 2 19 Out-of-frame Intra-chr q21.1 q24.33 Seq+ 101602 ChimerSeq TCGA FAWG TCGA_RNA-Seq THAP2-RAPGEF3 THAP2 chr12 71664580 + RAPGEF3 chr12 47751969 - Exonic hg38 SARC TCGA-DX-AB2H-01A 3 7 Out-of-frame Intra-chr q21.1 Transcription factor q13.11 Seq+ 101603 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF496-WIF1 ZNF496 chr1 247328683 - WIF1 chr12 65077854 - Exonic hg38 SARC TCGA-DX-AB2H-01A 2 10 Out-of-frame Inter-chr q44 Transcription factor q14.3 Tumor suppressor gene Seq+ 101604 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYRFL-KCNMB4 MYRFL chr12 69927748 + KCNMB4 chr12 70430485 + Exonic hg38 SARC TCGA-DX-AB2H-01A 1 13 Out-of-frame Intra-chr q15 Transcription factor q15 101605 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBD5-RAPGEF4 MBD5 chr2 148021684 + RAPGEF4 chr2 172996466 + Exonic hg38 SARC TCGA-DX-AB2H-01A 1 6 5'UTR-CDS Intra-chr q23.1 q31.1 101606 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFC3H1-CDK4 ZFC3H1 chr12 71660289 - CDK4 chr12 57751736 - Exonic hg38 SARC TCGA-DX-AB2H-01A 1 6 CDS-5'UTR Intra-chr q21.1 q14.1 CMGC:CDK Oncogene 101607 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLG2-NELL2 DLG2 chr11 84251238 - NELL2 chr12 44881839 - Exonic hg38 SARC TCGA-DX-AB2H-01A 1 3 CDS-5'UTR Inter-chr q14.1 q12 101608 ChimerSeq TCGA FAWG TCGA_RNA-Seq SESTD1-FGGY SESTD1 chr2 179264499 - FGGY chr1 59607803 + Exonic hg38 SARC TCGA-DX-AB2O-01A 57 103 5'UTR-5'UTR Inter-chr q31.2 p32.1 Seq+ 101609 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPYSL2-HMBOX1 DPYSL2 chr8 26583983 + HMBOX1 chr8 28980071 + Exonic hg38 SARC TCGA-DX-AB2O-01A 28 108 Out-of-frame Intra-chr p21.2 p21.1 Transcription factor Seq+ 101610 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D14-EVC TBC1D14 chr4 6987349 + EVC chr4 5783552 + Exonic hg38 SARC TCGA-DX-AB2O-01A 37 55 In-Frame Intra-chr p16.1 p16.2 Seq+ 101611 ChimerSeq TCGA FAWG TCGA_RNA-Seq STYX-DAD1 STYX chr14 52759754 + DAD1 chr14 22565137 - Exonic hg38 SARC TCGA-DX-AB2O-01A 19 97 CDS-3'UTR Intra-chr q22.1 q11.2 Seq+ 101612 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBR4-C1QC UBR4 chr1 19121189 - C1QC chr1 22647227 + Exonic hg38 SARC TCGA-DX-AB2O-01A 22 57 In-Frame Intra-chr p36.13 p36.12 Seq+ 101613 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPRD1A-CHMP2B RPRD1A chr18 36067254 - CHMP2B chr3 87245714 + Exonic hg38 SARC TCGA-DX-AB2O-01A 12 51 Out-of-frame Inter-chr q12.2 p11.2 Seq+ 101614 ChimerSeq TCGA FAWG TCGA_RNA-Seq INSR-CEP89 INSR chr19 7267345 - CEP89 chr19 32879378 - Exonic hg38 SARC TCGA-DX-AB2O-01A 13 45 Out-of-frame Intra-chr p13.2 TK:InsR q13.11 Seq+ 101615 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMBOX1-FSTL5 HMBOX1 chr8 28980156 + FSTL5 chr4 161587575 - Exonic hg38 SARC TCGA-DX-AB2O-01A 7 26 Out-of-frame Inter-chr p21.1 Transcription factor q32.2 Seq+ 101616 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF5C-GULP1 KIF5C chr2 149011683 + GULP1 chr2 188593940 + Exonic hg38 SARC TCGA-DX-AB2O-01A 7 25 3'UTR-CDS Intra-chr q32.1 Seq+ 101617 ChimerSeq TCGA FAWG TCGA_RNA-Seq EVC-ZDHHC2 EVC chr4 5787624 + ZDHHC2 chr8 17207960 + Exonic hg38 SARC TCGA-DX-AB2O-01A 4 27 3'UTR-CDS Inter-chr p16.2 p22 Tumor suppressor gene 101618 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPYSL2-FSTL5 DPYSL2 chr8 26583983 + FSTL5 chr4 161587575 - Exonic hg38 SARC TCGA-DX-AB2O-01A 2 31 Out-of-frame Inter-chr p21.2 q32.2 Seq+ 101619 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNPTAB-CCDC60 GNPTAB chr12 101830559 - CCDC60 chr12 119488759 + Exonic hg38 SARC TCGA-DX-AB2O-01A 5 18 Out-of-frame Intra-chr q23.2 q24.23 Seq+ 101620 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK2-LPP PAK2 chr3 196740157 + LPP chr3 188760113 + Exonic hg38 SARC TCGA-DX-AB2O-01A 6 6 5'UTR-CDS Intra-chr q29 STE:STE20 q27.3 Oncogene 101621 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAB2-KCNU1 TAB2 chr6 149342833 + KCNU1 chr8 36864404 + Exonic hg38 SARC TCGA-DX-AB2O-01A 5 9 5'UTR-5'UTR Inter-chr q25.1 p11.23 Seq+ 101622 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOK-C1orf141 MOK chr14 102250812 - C1orf141 chr1 67131227 - Exonic hg38 SARC TCGA-DX-AB2O-01A 3 5 CDS-5'UTR Inter-chr q32.31 CMGC:RCK p31.3 101623 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXJ3-RCOR1 FOXJ3 chr1 42265115 - RCOR1 chr14 102721007 + Exonic hg38 SARC TCGA-DX-AB2O-01A 1 12 In-Frame Inter-chr p34.2 Transcription factor q32.31 Seq+ 101624 ChimerSeq TCGA FAWG TCGA_RNA-Seq NBPF26-C1orf137 NBPF26 chr1 120763709 + C1orf137 chr1 116694759 + Exonic hg38 SARC TCGA-DX-AB2O-01A 1 12 5'UTR-5'UTR Intra-chr p11.2 p13.1 101625 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLI2-MARCO GLI2 chr2 120797468 + MARCO chr2 118969160 + Exonic hg38 SARC TCGA-DX-AB2O-01A 2 7 In-Frame Intra-chr q14.2 Transcription factor q14.2 Seq+ 101626 ChimerSeq TCGA FAWG TCGA_RNA-Seq RABIF-MKNK1 RABIF chr1 202888973 - MKNK1 chr1 46594280 - Exonic hg38 SARC TCGA-DX-AB2O-01A 1 11 CDS-5'UTR Intra-chr q32.1 p33 101627 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAB2-PAX7 TAB2 chr6 149318015 + PAX7 chr1 18735632 + Exonic hg38 SARC TCGA-DX-AB2O-01A 2 7 5'UTR-CDS Inter-chr q25.1 p36.13 Oncogene Transcription factor Seq+ 101628 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR137C-LRFN5 GPR137C chr14 52553591 + LRFN5 chr14 41766854 + Exonic hg38 SARC TCGA-DX-AB2O-01A 3 2 5'UTR-5'UTR Intra-chr q22.1 q21.1 101629 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS37A-WDR78 VPS37A chr8 17247369 + WDR78 chr1 66871509 - Exonic hg38 SARC TCGA-DX-AB2O-01A 1 8 In-Frame Inter-chr p22 p31.3 Seq+ 101630 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEDD1-GPHN NEDD1 chr12 96907300 + GPHN chr14 66965191 + Exonic hg38 SARC TCGA-DX-AB2O-01A 2 3 5'UTR-CDS Inter-chr q23.1 q23.3 Seq+ 101631 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF10-DENR RNF10 chr12 120552698 + DENR chr12 122753693 + Exonic hg38 SARC TCGA-DX-AB2O-01A 2 3 CDS-5'UTR Intra-chr q24.31 q24.31 101632 ChimerSeq TCGA FAWG TCGA_RNA-Seq TGFBRAP1-ARHGAP15 TGFBRAP1 chr2 105269272 - ARHGAP15 chr2 143435601 + Exonic hg38 SARC TCGA-DX-AB2O-01A 2 3 In-Frame Intra-chr q12.2 q22.2 Seq+ 101633 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCTD8-WDR19 KCTD8 chr4 44447563 - WDR19 chr4 39266063 + Exonic hg38 SARC TCGA-DX-AB2O-01A 1 2 Out-of-frame Intra-chr p13 p14 Seq+ 101634 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEBP1-CCDC60 PEBP1 chr12 118139551 + CCDC60 chr12 119488759 + Exonic hg38 SARC TCGA-DX-AB2O-01A 1 2 Out-of-frame Intra-chr q24.23 Tumor suppressor gene q24.23 101635 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAZN-SPATA9 KAZN chr1 14599223 + SPATA9 chr5 95664048 - Exonic hg38 SARC TCGA-DX-AB2O-01A 1 1 Out-of-frame Inter-chr p36.21 q15 101636 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYL12A-AKAIN1 MYL12A chr18 3254050 + AKAIN1 chr18 5145755 - Exonic hg38 SARC TCGA-DX-AB2P-01A 16 100 In-Frame Intra-chr p11.31 p11.31 101637 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEL1L-CHURC1 SEL1L chr14 81484225 - CHURC1 chr14 64923991 + Exonic hg38 SARC TCGA-DX-AB2P-01A 16 52 In-Frame Intra-chr q31.1 q23.3 101638 ChimerSeq TCGA FAWG TCGA_RNA-Seq SULF2-WFDC3 SULF2 chr20 47736703 - WFDC3 chr20 45775602 - Exonic hg38 SARC TCGA-DX-AB2P-01A 11 46 In-Frame Intra-chr q13.12 q13.12 Seq+ 101639 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAZN-PHGDH KAZN chr1 14180592 + PHGDH chr1 119721170 + Exonic hg38 SARC TCGA-DX-AB2P-01A 4 17 5'UTR-CDS Intra-chr p36.21 p12 101640 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCCA-DNAJC3 PCCA chr13 100235878 + DNAJC3 chr13 95790873 + Exonic hg38 SARC TCGA-DX-AB2P-01A 2 8 In-Frame Intra-chr q32.3 q32.1 Seq+ 101641 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELF1-XKR5 CELF1 chr11 47472191 - XKR5 chr8 6812339 - Exonic hg38 SARC TCGA-DX-AB2Q-01A 7 22 3'UTR-5'UTR Inter-chr p11.2 p23.1 Seq+ 101642 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD3-MIR99AHG NSD3 chr8 38318895 - MIR99AHG chr21 16231056 + Exonic hg38 SARC TCGA-DX-AB2Q-01A 4 13 CDS-5'UTR Inter-chr p11.23 Tumor suppressor gene q21.1 101643 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNMBP-RFWD2 DNMBP chr10 100009838 - RFWD2 chr1 176135086 - Exonic hg38 SARC TCGA-DX-AB2Q-01A 2 17 Out-of-frame Inter-chr q24.2 q25.2 Tumor suppressor gene Seq+ 101644 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-SYTL2 BCAS3 chr17 61084564 + SYTL2 chr11 85714507 - Exonic hg38 SARC TCGA-DX-AB2Q-01A 3 6 In-Frame Inter-chr q23.2 q14.1 Seq+ 101645 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD6-MYH7B CHD6 chr20 41440000 - MYH7B chr20 34995336 + Exonic hg38 SARC TCGA-DX-AB2Q-01A 3 6 Out-of-frame Intra-chr q12 q11.22 Seq+ 101646 ChimerSeq TCGA FAWG TCGA_RNA-Seq AXIN1-SYVN1 AXIN1 chr16 346148 - SYVN1 chr11 65133618 - Exonic hg38 SARC TCGA-DX-AB2Q-01A 1 7 CDS-5'UTR Inter-chr p13.3 Oncogene Tumor suppressor gene q13.1 101647 ChimerSeq TCGA FAWG TCGA_RNA-Seq LARGE1-EIF4ENIF1 LARGE1 chr22 33277060 - EIF4ENIF1 chr22 31444690 - Exonic hg38 SARC TCGA-DX-AB2Q-01A 1 2 Out-of-frame Intra-chr q12.3 q12.2 101648 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCHSD2-FAM35A FCHSD2 chr11 72984088 - FAM35A chr10 87175889 + Exonic hg38 SARC TCGA-DX-AB2Q-01A 1 1 Out-of-frame Inter-chr q13.4 q23.2 101649 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD11-SYT15 ANKRD11 chr16 89490245 - SYT15 chr10 46580231 + Exonic hg38 SARC TCGA-DX-AB2Q-01A 1000 1000 3'UTR-3'UTR Inter-chr q24.3 q11.22 Seq+ 101650 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIT1-C1orf105 NIT1 chr1 161120232 + C1orf105 chr1 172462178 + Exonic hg38 SARC TCGA-DX-AB2S-01A 81 244 In-Frame Intra-chr q23.3 q24.3 Seq+ 101651 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAP3-RPRD2 DAP3 chr1 155725411 + RPRD2 chr1 150464527 + Exonic hg38 SARC TCGA-DX-AB2S-01A 8 116 In-Frame Intra-chr q22 q21.2 Seq+ 101652 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN8-IL26 TSPAN8 chr12 71277351 - IL26 chr12 68202083 - Exonic hg38 SARC TCGA-DX-AB2S-01A 5 26 5'UTR-CDS Intra-chr q21.1 q15 Seq+ 101653 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH1L-RC3H1 ASH1L chr1 155562153 - RC3H1 chr1 173993135 - Exonic hg38 SARC TCGA-DX-AB2S-01A 3 13 5'UTR-5'UTR Intra-chr q22 Transcription factor q25.1 Seq+ 101654 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCL1-GRIP1 MCL1 chr1 150578843 - GRIP1 chr12 66596927 - Exonic hg38 SARC TCGA-DX-AB2S-01A 3 9 In-Frame Inter-chr q21.2 Oncogene q14.3 101655 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAV3-PPFIA2 NAV3 chr12 78159286 + PPFIA2 chr12 81445720 - Exonic hg38 SARC TCGA-DX-AB2S-01A 1 11 In-Frame Intra-chr q21.2 q21.31 101656 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCT2-TSPAN8 CCT2 chr12 69593103 + TSPAN8 chr12 71282819 - Exonic hg38 SARC TCGA-DX-AB2S-01A 1000 1000 CDS-5'UTR Intra-chr q15 q21.1 101657 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53-HIGD1B TP53 chr17 7687377 - HIGD1B chr17 44848102 + Exonic hg38 SARC TCGA-DX-AB2T-01A 22 176 5'UTR-5'UTR Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor q21.31 101658 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNC-MICAL1 CCNC chr6 99568496 - MICAL1 chr6 109446772 - Exonic hg38 SARC TCGA-DX-AB2T-01A 3 8 Out-of-frame Intra-chr q16.2 Tumor suppressor gene q21 Seq+ 101659 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAT1-C1R BCAT1 chr12 24878530 - C1R chr12 7086457 - Exonic hg38 SARC TCGA-DX-AB2T-01A 1 8 In-Frame Intra-chr p12.1 p13.31 101660 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKIRIN2-GAREM1 AKIRIN2 chr6 87701450 - GAREM1 chr18 32270383 - Exonic hg38 SARC TCGA-DX-AB2T-01A 1 6 Out-of-frame Inter-chr q15 q12.1 101661 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOCOS-MEI4 MOCOS chr18 36205276 + MEI4 chr6 77923089 + Exonic hg38 SARC TCGA-DX-AB2T-01A 1 6 In-Frame Inter-chr q12.2 q14.1 101662 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNXB-VIM TNXB chr6 32048363 - VIM chr10 17236294 + Exonic hg38 SARC TCGA-DX-AB2T-01A 1 5 5'UTR-CDS Inter-chr p13 Tumor suppressor gene 101663 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNTLN-RAB12 CNTLN chr9 17143376 + RAB12 chr18 8624938 + Exonic hg38 SARC TCGA-DX-AB2T-01A 1 3 Out-of-frame Inter-chr p22.2 p11.22 101664 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAX-ACTN1 MAX chr14 65093708 - ACTN1 chr14 68925672 - Exonic hg38 SARC TCGA-DX-AB2V-01A 72 486 In-Frame Intra-chr q23.3 Oncogene Tumor suppressor gene Transcription factor q24.1 Seq+ 101665 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIRREL-CD1C KIRREL chr1 157993728 + CD1C chr1 158291134 + Exonic hg38 SARC TCGA-DX-AB2V-01A 24 115 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 101666 ChimerSeq TCGA FAWG TCGA_RNA-Seq RGL1-NMNAT2 RGL1 chr1 183636501 + NMNAT2 chr1 183278629 - Exonic hg38 SARC TCGA-DX-AB2V-01A 9 28 5'UTR-CDS Intra-chr q25.3 q25.3 Seq+ 101667 ChimerSeq TCGA FAWG TCGA_RNA-Seq LY96-GDAP1 LY96 chr8 73991554 + GDAP1 chr8 74488678 + Exonic hg38 SARC TCGA-DX-AB2V-01A 7 34 In-Frame Intra-chr q21.11 q21.11 Seq+ 101668 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF26A-CEP170B KIF26A chr14 104139288 + CEP170B chr14 104893523 + Exonic hg38 SARC TCGA-DX-AB2V-01A 5 17 In-Frame Intra-chr q32.33 q32.33 Seq+ 101669 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF11-SHC1 ARHGEF11 chr1 157044299 - SHC1 chr1 154970199 - Exonic hg38 SARC TCGA-DX-AB2V-01A 2 5 CDS-5'UTR Intra-chr q23.1 q21.3 Seq+ 101670 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAD2-WDYHV1 ATAD2 chr8 123372637 - WDYHV1 chr8 123436453 + Exonic hg38 SARC TCGA-DX-AB2V-01A 1 6 Out-of-frame Intra-chr q24.13 q24.13 Seq+ 101671 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSG101-PPFIA1 TSG101 chr11 18514678 - PPFIA1 chr11 70383003 + Exonic hg38 SARC TCGA-DX-AB2V-01A 1 5 CDS-5'UTR Intra-chr p15.1 Tumor suppressor gene q13.3 101672 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIRREL-CD1A KIRREL chr1 157993728 + CD1A chr1 158256786 + Exonic hg38 SARC TCGA-DX-AB2V-01A 1000 1000 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 101673 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO5A-GALK2 MYO5A chr15 52528780 - GALK2 chr15 49281987 + Exonic hg38 SARC TCGA-DX-AB2W-01A 1 13 In-Frame Intra-chr q21.2 q21.1 101674 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPBL-L3MBTL4 NIPBL chr5 36877178 + L3MBTL4 chr18 6171942 - Exonic hg38 SARC TCGA-DX-AB2W-01A 2 5 5'UTR-CDS Inter-chr p13.2 p11.31 Tumor suppressor gene Transcription factor Seq+ 101675 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTDSS2-B4GALNT4 PTDSS2 chr11 460288 + B4GALNT4 chr11 372109 + Exonic hg38 SARC TCGA-DX-AB2W-01A 2 3 3'UTR-CDS Intra-chr p15.5 101676 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL22-PRDM16 RPL22 chr1 6197652 - PRDM16 chr1 3425581 + Exonic hg38 SARC TCGA-DX-AB2X-01A 40 249 Out-of-frame Intra-chr p36.31 p36.32 Transcription factor Seq+ 101677 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM222B-ALDOC FAM222B chr17 28842682 - ALDOC chr17 28575544 - Exonic hg38 SARC TCGA-DX-AB2X-01A 26 79 5'UTR-5'UTR Intra-chr q11.2 q11.2 101678 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHLDB1-ACTN1 PHLDB1 chr11 118621538 + ACTN1 chr14 68925672 - Exonic hg38 SARC TCGA-DX-AB2Z-01A 61 98 CDS-3'UTR Inter-chr q23.3 q24.1 101679 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTIF-AJUBA CTIF chr18 48539312 + AJUBA chr14 22978445 - Exonic hg38 SARC TCGA-DX-AB2Z-01A 26 133 3'UTR-CDS Inter-chr q11.2 Seq+ 101680 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP5-FAM193A SENP5 chr3 196930900 + FAM193A chr4 2672121 + Exonic hg38 SARC TCGA-DX-AB2Z-01A 2 6 Out-of-frame Inter-chr q29 p16.3 Seq+ 101681 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMAN1-NBEAL1 LMAN1 chr18 59345919 - NBEAL1 chr2 203226123 + Exonic hg38 SARC TCGA-DX-AB32-01A 166 476 CDS-3'UTR Inter-chr q21.32 q33.2 Seq+ 101682 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF407-TFAP4 ZNF407 chr18 74597937 + TFAP4 chr16 4262701 - Exonic hg38 SARC TCGA-DX-AB32-01A 2 2 5'UTR-CDS Inter-chr q22.3 Transcription factor p13.3 Transcription factor 101683 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM5-FAM19A2 TMEM5 chr12 63802405 + FAM19A2 chr12 62192243 - Exonic hg38 SARC TCGA-DX-AB35-01A 170 744 Out-of-frame Intra-chr q14.2 q14.1 101684 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPY19L2-NUP107 DPY19L2 chr12 63665835 - NUP107 chr12 68731110 + Exonic hg38 SARC TCGA-DX-AB35-01A 137 837 Out-of-frame Intra-chr q14.2 q15 Seq+ 101685 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBK1-TMBIM4 TBK1 chr12 64455957 + TMBIM4 chr12 66153448 - Exonic hg38 SARC TCGA-DX-AB35-01A 58 191 Out-of-frame Intra-chr q14.2 Other:IKK q14.3 Seq+ 101686 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBK1-TMTC2 TBK1 chr12 64455957 + TMTC2 chr12 83061768 + Exonic hg38 SARC TCGA-DX-AB35-01A 37 61 Out-of-frame Intra-chr q14.2 Other:IKK q21.31 Seq+ 101687 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRR-KCNC2 PTPRR chr12 70698265 - KCNC2 chr12 75051317 - Exonic hg38 SARC TCGA-DX-AB35-01A 17 55 Out-of-frame Intra-chr q15 q21.1 Seq+ 101688 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT2-TMTC2 CNOT2 chr12 70311017 + TMTC2 chr12 82965024 + Exonic hg38 SARC TCGA-DX-AB35-01A 8 70 Out-of-frame Intra-chr q15 q21.31 101689 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-PTPRR FRS2 chr12 69532056 + PTPRR chr12 70701323 - Exonic hg38 SARC TCGA-DX-AB35-01A 4 42 5'UTR-CDS Intra-chr q15 q15 Seq+ 101690 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC17-MYRFL ZDHHC17 chr12 76764329 + MYRFL chr12 69952113 + Exonic hg38 SARC TCGA-DX-AB35-01A 2 16 Out-of-frame Intra-chr q21.2 q15 Transcription factor 101691 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFF1-WWOX AFF1 chr4 87115299 + WWOX chr16 79211608 + Exonic hg38 SARC TCGA-DX-AB35-01A 2 10 In-Frame Inter-chr q21.3 Oncogene q23.1 Tumor suppressor gene Seq+ 101692 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL25-PTPRQ METTL25 chr12 82403130 + PTPRQ chr12 80632192 + Exonic hg38 SARC TCGA-DX-AB35-01A 2 4 In-Frame Intra-chr q21.31 q21.31 101693 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAV3-FAM19A2 NAV3 chr12 78059115 + FAM19A2 chr12 61755024 - Exonic hg38 SARC TCGA-DX-AB35-01A 2 3 Out-of-frame Intra-chr q21.2 q14.1 101694 ChimerSeq TCGA FAWG TCGA_RNA-Seq MVK-CPM MVK chr12 109586125 + CPM chr12 68856679 - Exonic hg38 SARC TCGA-DX-AB36-01A 41 207 Out-of-frame Intra-chr q24.11 q15 Seq+ 101695 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCTD10-SLC26A10 KCTD10 chr12 109456906 - SLC26A10 chr12 57625786 + Exonic hg38 SARC TCGA-DX-AB36-01A 27 76 Out-of-frame Intra-chr q24.11 q13.3 101696 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R12A-METTL25 PPP1R12A chr12 79872808 - METTL25 chr12 82456727 + Exonic hg38 SARC TCGA-DX-AB36-01A 13 115 In-Frame Intra-chr q21.31 q21.31 101697 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGGY-CC2D1B FGGY chr1 59626049 + CC2D1B chr1 52362746 - Exonic hg38 SARC TCGA-DX-AB36-01A 15 63 Out-of-frame Intra-chr p32.1 p32.3 Seq+ 101698 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-SLC26A10 FRS2 chr12 69574908 + SLC26A10 chr12 57620342 + Exonic hg38 SARC TCGA-DX-AB36-01A 19 47 Out-of-frame Intra-chr q15 q13.3 101699 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK4-ANO5 CDK4 chr12 57752175 - ANO5 chr11 22270312 + Exonic hg38 SARC TCGA-DX-AB36-01A 4 53 5'UTR-CDS Inter-chr q14.1 CMGC:CDK Oncogene p14.3 101700 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM44-LDLRAD3 TRIM44 chr11 35735445 + LDLRAD3 chr11 36227085 + Exonic hg38 SARC TCGA-DX-AB36-01A 9 33 Out-of-frame Intra-chr p13 p13 101701 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEGR1-ZFYVE9 NEGR1 chr1 72282319 - ZFYVE9 chr1 52216369 + Exonic hg38 SARC TCGA-DX-AB36-01A 6 30 CDS-5'UTR Intra-chr p31.1 p32.3 Seq+ 101702 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK17-MSRB3 CDK17 chr12 96399986 - MSRB3 chr12 65368998 + Exonic hg38 SARC TCGA-DX-AB36-01A 8 3 5'UTR-CDS Intra-chr q23.1 q14.3 101703 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO5-CPM ANO5 chr11 22276199 + CPM chr12 68859071 - Exonic hg38 SARC TCGA-DX-AB36-01A 2 26 Out-of-frame Inter-chr p14.3 q15 Seq+ 101704 ChimerSeq TCGA FAWG TCGA_RNA-Seq OTOGL-TRPV4 OTOGL chr12 80323840 + TRPV4 chr12 109814827 - Exonic hg38 SARC TCGA-DX-AB36-01A 5 14 CDS-5'UTR Intra-chr q21.31 q24.11 Seq+ 101705 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCM1-VEZT PCM1 chr8 18011827 + VEZT chr12 95266357 + Exonic hg38 SARC TCGA-DX-AB36-01A 4 6 Out-of-frame Inter-chr p22 q22 Tumor suppressor gene 101706 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGD6-RPSAP52 FGD6 chr12 95089569 - RPSAP52 chr12 65759031 - Exonic hg38 SARC TCGA-DX-AB36-01A 1 16 CDS-3'UTR Intra-chr q22 q14.3 101707 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC2-FGD6 ZDHHC2 chr8 17156853 + FGD6 chr12 95085908 - Exonic hg38 SARC TCGA-DX-AB36-01A 1 13 Out-of-frame Inter-chr p22 Tumor suppressor gene q22 Seq+ 101708 ChimerSeq TCGA FAWG TCGA_RNA-Seq YEATS4-ZFYVE9 YEATS4 chr12 69360023 + ZFYVE9 chr1 52216369 + Exonic hg38 SARC TCGA-DX-AB36-01A 2 6 CDS-5'UTR Inter-chr q15 p32.3 101709 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK17-USP30 CDK17 chr12 96311052 - USP30 chr12 109067524 + Exonic hg38 SARC TCGA-DX-AB36-01A 1 5 Out-of-frame Intra-chr q23.1 q24.11 Seq+ 101710 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC2-RPSAP52 ZDHHC2 chr8 17156853 + RPSAP52 chr12 65759031 - Exonic hg38 SARC TCGA-DX-AB36-01A 1 5 CDS-3'UTR Inter-chr p22 Tumor suppressor gene q14.3 101711 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL5A2-OS9 COL5A2 chr2 189032737 - OS9 chr12 57716699 + Exonic hg38 SARC TCGA-DX-AB36-01A 1000 1000 Out-of-frame Inter-chr q32.2 q13.3 101712 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXND1-NEK11 PLXND1 chr3 129585952 - NEK11 chr3 131349557 + Exonic hg38 SARC TCGA-DX-AB37-01A 11 57 Out-of-frame Intra-chr q22.1 q22.1 Other:NEK Seq+ 101713 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT2-MBD4 CNOT2 chr12 70319364 + MBD4 chr3 129434136 - Exonic hg38 SARC TCGA-DX-AB37-01A 8 19 In-Frame Inter-chr q15 q21.3 Tumor suppressor gene Transcription factor 101714 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST7-TBXAS1 ST7 chr7 116953691 + TBXAS1 chr7 140007091 + Exonic hg38 SARC TCGA-DX-AB37-01A 5 15 Out-of-frame Intra-chr q31.2 Tumor suppressor gene q34 Seq+ 101715 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGD6-PTPRR FGD6 chr12 95089569 - PTPRR chr12 70639277 - Exonic hg38 SARC TCGA-DX-AB37-01A 7 5 Out-of-frame Intra-chr q22 q15 Seq+ 101716 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT2-TRMT10C CNOT2 chr12 70319364 + TRMT10C chr3 101564770 + Exonic hg38 SARC TCGA-DX-AB37-01A 4 12 5'UTR-5'UTR Inter-chr q15 q12.3 101717 ChimerSeq TCGA FAWG TCGA_RNA-Seq MUC3A-IGHJ2 MUC3A chr7 100957106 + IGHJ2 chr14 105865247 - Exonic hg38 SARC TCGA-DX-AB37-01A 7 0 Out-of-frame Inter-chr q22.1 101718 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH2B3-RBM19 SH2B3 chr12 111418877 + RBM19 chr12 113937136 - Exonic hg38 SARC TCGA-DX-AB37-01A 3 11 In-Frame Intra-chr q24.12 Tumor suppressor gene q24.21 101719 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB20-CPM ZBTB20 chr3 114500352 - CPM chr12 68859071 - Exonic hg38 SARC TCGA-DX-AB37-01A 1 7 5'UTR-CDS Inter-chr q13.31 Transcription factor q15 Seq+ 101720 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDM2-FGF18 MDM2 chr12 68820374 + FGF18 chr5 171456539 + Exonic hg38 SARC TCGA-DX-AB3A-01A 65 124 Out-of-frame Inter-chr q15 Oncogene q35.1 Seq+ 101721 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSP2-LGR5 CTDSP2 chr12 57846372 - LGR5 chr12 71504614 + Exonic hg38 SARC TCGA-DX-AB3A-01A 27 51 Out-of-frame Intra-chr q14.1 q21.1 Seq+ 101722 ChimerSeq TCGA FAWG TCGA_RNA-Seq FKBP5-CPM FKBP5 chr6 35642720 - CPM chr12 68867048 - Exonic hg38 SARC TCGA-DX-AB3A-01A 16 25 Out-of-frame Inter-chr p21.31 q15 101723 ChimerSeq TCGA FAWG TCGA_RNA-Seq COMMD10-NUP107 COMMD10 chr5 116092700 + NUP107 chr12 68741813 + Exonic hg38 SARC TCGA-DX-AB3A-01A 12 35 In-Frame Inter-chr q23.1 q15 Seq+ 101724 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL9-FKBP5 OSBPL9 chr1 51617221 + FKBP5 chr6 35642843 - Exonic hg38 SARC TCGA-DX-AB3A-01A 11 37 5'UTR-5'UTR Inter-chr p32.3 p21.31 Seq+ 101725 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEN1-CYP2J2 TEN1 chr17 75979511 + CYP2J2 chr1 59916100 - Exonic hg38 SARC TCGA-DX-AB3A-01A 9 35 5'UTR-CDS Inter-chr q25.1 p32.1 101726 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSP2-COMMD10 CTDSP2 chr12 57846372 - COMMD10 chr5 116091079 + Exonic hg38 SARC TCGA-DX-AB3A-01A 10 28 Out-of-frame Inter-chr q14.1 q23.1 101727 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRS2-LRRIQ1 MRS2 chr6 24418578 + LRRIQ1 chr12 85262915 + Exonic hg38 SARC TCGA-DX-AB3A-01A 4 30 CDS-3'UTR Inter-chr p22.3 q21.31 101728 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPRIN1-TM2D1 GPRIN1 chr5 176609999 - TM2D1 chr1 61701025 - Exonic hg38 SARC TCGA-DX-AB3A-01A 6 17 5'UTR-CDS Inter-chr q35.2 p31.3 Seq+ 101729 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-AS2 BCAS3 chr17 60709325 + AS2 chr1 71463331 + Exonic hg38 SARC TCGA-DX-AB3A-01A 4 15 Out-of-frame Inter-chr q23.2 101730 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACP6-PIAS3 ACP6 chr1 147669830 - PIAS3 chr1 145857006 - Exonic hg38 SARC TCGA-DX-AB3A-01A 5 5 In-Frame Intra-chr q21.2 q21.1 Seq+ 101731 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB10-PIP4K2C GRB10 chr7 50669722 - PIP4K2C chr12 57594025 + Exonic hg38 SARC TCGA-DX-AB3A-01A 4 9 In-Frame Inter-chr p12.1 q13.3 Seq+ 101732 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD1-FGF18 NSD1 chr5 177257151 + FGF18 chr5 171449147 + Exonic hg38 SARC TCGA-DX-AB3A-01A 2 17 In-Frame Intra-chr q35.3 Oncogene q35.1 Seq+ 101733 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACHD1-USP32 CACHD1 chr1 64641969 + USP32 chr17 60345608 - Exonic hg38 SARC TCGA-DX-AB3A-01A 4 8 In-Frame Inter-chr p31.3 q23.2 Seq+ 101734 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM159-NDUFAB1 TMEM159 chr16 21161278 + NDUFAB1 chr16 23587319 - Exonic hg38 SARC TCGA-DX-AB3A-01A 2 16 3'UTR-CDS Intra-chr p12.2 Seq+ 101735 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUEDC1-LRP8 CUEDC1 chr17 57879611 - LRP8 chr1 53280715 - Exonic hg38 SARC TCGA-DX-AB3A-01A 3 10 Out-of-frame Inter-chr q22 p32.3 Seq+ 101736 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP32-NIFKP2 USP32 chr17 60345481 - NIFKP2 chr5 174923641 + Exonic hg38 SARC TCGA-DX-AB3A-01A 3 6 Out-of-frame Inter-chr q23.2 q35.2 101737 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMED7-PDE4B TMED7 chr5 115625601 - PDE4B chr1 66247460 + Exonic hg38 SARC TCGA-DX-AB3A-01A 2 9 Out-of-frame Inter-chr q22.3 p31.3 101738 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX40-CEP112 DHX40 chr17 59570663 + CEP112 chr17 66070001 - Exonic hg38 SARC TCGA-DX-AB3A-01A 3 2 In-Frame Intra-chr q23.1 q24.1 Seq+ 101739 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-CAPS2 FRS2 chr12 69532056 + CAPS2 chr12 75371482 - Exonic hg38 SARC TCGA-DX-AB3A-01A 2 4 5'UTR-5'UTR Intra-chr q15 q21.2 101740 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLK2-TSPOAP1 TLK2 chr17 62586226 + TSPOAP1 chr17 58307941 - Exonic hg38 SARC TCGA-DX-AB3A-01A 2 4 Out-of-frame Intra-chr q23.2 Other:TLK q22 101741 ChimerSeq TCGA FAWG TCGA_RNA-Seq RGL1-POU2F1 RGL1 chr1 183806485 + POU2F1 chr1 167415500 + Exonic hg38 SARC TCGA-DX-AB3A-01A 2 3 Out-of-frame Intra-chr q25.3 q24.2 Transcription factor Seq+ 101742 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZCCHC11-NFIA ZCCHC11 chr1 52552931 - NFIA chr1 61359147 + Exonic hg38 SARC TCGA-DX-AB3A-01A 2 2 Out-of-frame Intra-chr p32.3 p31.3 Transcription factor Seq+ 101743 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC44A5-GLIS1 SLC44A5 chr1 75339582 - GLIS1 chr1 53529952 - Exonic hg38 SARC TCGA-DX-AB3A-01A 1 5 Out-of-frame Intra-chr p31.1 p32.3 Transcription factor 101744 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSFM-RFWD2 TSFM chr12 57793073 + RFWD2 chr1 175947239 - Exonic hg38 SARC TCGA-DX-AB3A-01A 2 1 Out-of-frame Inter-chr q14.1 q25.2 Tumor suppressor gene 101745 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPEB4-CEP112 CPEB4 chr5 173910604 + CEP112 chr17 66183307 - Exonic hg38 SARC TCGA-DX-AB3A-01A 1 4 CDS-5'UTR Inter-chr q35.2 q24.1 101746 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF44-MILR1 RNF44 chr5 176537731 - MILR1 chr17 64467565 + Exonic hg38 SARC TCGA-DX-AB3A-01A 1 2 5'UTR-CDS Inter-chr q35.2 q23.3 101747 ChimerSeq TCGA FAWG TCGA_RNA-Seq SS18-SSX1 SS18 chr18 26032399 - SSX1 chrX 48263782 + Exonic hg38 SARC TCGA-DX-AB3B-01A 100 404 In-Frame Inter-chr q11.2 p11.23 Oncogene KB Pub Seq+ 101748 ChimerSeq TCGA FAWG TCGA_RNA-Seq SS18-SSX2 SS18 chr18 26032399 - SSX2 chrX 52700578 - Exonic hg38 SARC TCGA-DX-AB3C-01A 48 105 CDS-5'UTR Inter-chr q11.2 p11.22 KB Pub Seq+ 101749 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-TMTC2 FRS2 chr12 69532056 + TMTC2 chr12 82985925 + Exonic hg38 SARC TCGA-FX-A2QS-01A 174 475 5'UTR-CDS Intra-chr q15 q21.31 Seq+ 101750 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASSF3-STK10 RASSF3 chr12 64610743 + STK10 chr5 172064812 - Exonic hg38 SARC TCGA-FX-A2QS-01A 98 346 In-Frame Inter-chr q14.2 Tumor suppressor gene q35.1 Tumor suppressor gene Seq+ 101751 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPSF6-COL9A1 CPSF6 chr12 69239706 + COL9A1 chr6 70217081 - Exonic hg38 SARC TCGA-FX-A2QS-01A 24 534 Out-of-frame Inter-chr q15 q13 Seq+ 101752 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETS1-UBE2V2 ETS1 chr11 128521913 - UBE2V2 chr8 48043033 + Exonic hg38 SARC TCGA-FX-A2QS-01A 25 337 In-Frame Inter-chr q24.3 Oncogene Transcription factor q11.21 Seq+ 101753 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNN3-YEATS4 KCNN3 chr1 154733003 - YEATS4 chr12 69362788 + Exonic hg38 SARC TCGA-FX-A2QS-01A 26 129 In-Frame Inter-chr q21.3 q15 Seq+ 101754 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAP-SEMA5A DAP chr5 10761014 - SEMA5A chr5 9066646 - Exonic hg38 SARC TCGA-FX-A2QS-01A 22 90 Out-of-frame Intra-chr p15.2 p15.31 Seq+ 101755 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA5A-SLC6A19 SEMA5A chr5 9066421 - SLC6A19 chr5 1208746 + Exonic hg38 SARC TCGA-FX-A2QS-01A 14 111 In-Frame Intra-chr p15.31 p15.33 Seq+ 101756 ChimerSeq TCGA FAWG TCGA_RNA-Seq JAZF1-EVX1 JAZF1 chr7 28180463 - EVX1 chr7 27245048 + Exonic hg38 SARC TCGA-FX-A2QS-01A 18 64 In-Frame Intra-chr p15.1 Transcription factor p15.2 Transcription factor Seq+ 101757 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACVR2A-SUMO1 ACVR2A chr2 147923111 + SUMO1 chr2 202207321 - Exonic hg38 SARC TCGA-FX-A2QS-01A 18 61 Out-of-frame Intra-chr q22.3 Oncogene q33.1 Seq+ 101758 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF6-YEATS4 DCAF6 chr1 168045227 + YEATS4 chr12 69390147 + Exonic hg38 SARC TCGA-FX-A2QS-01A 21 42 Out-of-frame Inter-chr q24.2 q15 Seq+ 101759 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF6-HMCN1 DCAF6 chr1 168045227 + HMCN1 chr1 185846026 + Exonic hg38 SARC TCGA-FX-A2QS-01A 11 59 Out-of-frame Intra-chr q24.2 q25.3 Seq+ 101760 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA2-OTOGL PPFIA2 chr12 81753973 - OTOGL chr12 80296827 + Exonic hg38 SARC TCGA-FX-A2QS-01A 6 77 In-Frame Intra-chr q21.31 q21.31 Seq+ 101761 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO4-C12orf66 ANO4 chr12 100717547 + C12orf66 chr12 64215963 - Exonic hg38 SARC TCGA-FX-A2QS-01A 19 10 5'UTR-CDS Intra-chr q23.1 q14.2 Seq+ 101762 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFS2-SLC24A2 NDUFS2 chr1 161202480 + SLC24A2 chr9 19597279 - Exonic hg38 SARC TCGA-FX-A2QS-01A 9 34 Out-of-frame Inter-chr q23.3 p22.1 Seq+ 101763 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCA9-TANC2 ABCA9 chr17 68982562 - TANC2 chr17 63267748 + Exonic hg38 SARC TCGA-FX-A2QS-01A 6 43 In-Frame Intra-chr q24.2 q23.2 Seq+ 101764 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB44-FRS2 ZBTB44 chr11 130314375 - FRS2 chr12 69562180 + Exonic hg38 SARC TCGA-FX-A2QS-01A 13 9 5'UTR-5'UTR Inter-chr q24.3 Transcription factor q15 Seq+ 101765 ChimerSeq TCGA FAWG TCGA_RNA-Seq C12orf66-CPM C12orf66 chr12 64215678 - CPM chr12 68957678 - Exonic hg38 SARC TCGA-FX-A2QS-01A 7 28 CDS-5'UTR Intra-chr q14.2 q15 Seq+ 101766 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL9-BEST3 BCL9 chr1 147541674 + BEST3 chr12 69655813 - Exonic hg38 SARC TCGA-FX-A2QS-01A 8 19 5'UTR-CDS Inter-chr q21.2 Oncogene q15 Seq+ 101767 ChimerSeq TCGA FAWG TCGA_RNA-Seq FXN-FPR2 FXN chr9 69065035 + FPR2 chr19 51760032 + Exonic hg38 SARC TCGA-FX-A2QS-01A 7 23 CDS-5'UTR Inter-chr q21.11 Tumor suppressor gene q13.41 Seq+ 101768 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALT3-ERO1B B4GALT3 chr1 161173605 - ERO1B chr1 236243495 - Exonic hg38 SARC TCGA-FX-A2QS-01A 8 18 In-Frame Intra-chr q23.3 q42.3 101769 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM255A-FPR2 TMEM255A chrX 120304349 - FPR2 chr19 51760032 + Exonic hg38 SARC TCGA-FX-A2QS-01A 4 29 CDS-5'UTR Inter-chr q24 q13.41 Seq+ 101770 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNS3-ALG13 TNS3 chr7 47582051 - ALG13 chrX 111682132 + Exonic hg38 SARC TCGA-FX-A2QS-01A 10 5 5'UTR-5'UTR Inter-chr p12.3 q23 Seq+ 101771 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF146-ABCA9 ZNF146 chr19 36218195 + ABCA9 chr17 68996014 - Exonic hg38 SARC TCGA-FX-A2QS-01A 3 30 5'UTR-CDS Inter-chr q13.12 Transcription factor q24.2 Seq+ 101772 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLK2-MARS CLK2 chr1 155268293 - MARS chr12 57488030 + Exonic hg38 SARC TCGA-FX-A2QS-01A 5 21 5'UTR-5'UTR Inter-chr q22 CMGC:CLK q13.3 Seq+ 101773 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF665-RANBP3L ZNF665 chr19 53175445 - RANBP3L chr5 36271311 - Exonic hg38 SARC TCGA-FX-A2QS-01A 2 31 In-Frame Inter-chr q13.42 Transcription factor p13.2 Seq+ 101774 ChimerSeq TCGA FAWG TCGA_RNA-Seq OTOGL-HMGA2 OTOGL chr12 80305695 + HMGA2 chr12 65828001 + Exonic hg38 SARC TCGA-FX-A2QS-01A 4 22 In-Frame Intra-chr q21.31 q14.3 Transcription factor Seq+ 101775 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC7A5-NOS1AP SLC7A5 chr16 87868885 - NOS1AP chr1 162154405 + Exonic hg38 SARC TCGA-FX-A2QS-01A 8 4 Out-of-frame Inter-chr q24.2 q23.3 Seq+ 101776 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD2AP-MGAT4C CD2AP chr6 47554766 + MGAT4C chr12 86838880 - Exonic hg38 SARC TCGA-FX-A2QS-01A 4 16 CDS-5'UTR Inter-chr p12.3 Seq+ 101777 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM2-GDF15 DNM2 chr19 10718403 + GDF15 chr19 18382350 + Exonic hg38 SARC TCGA-FX-A2QS-01A 2 23 CDS-5'UTR Intra-chr p13.2 p13.11 Seq+ 101778 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF216-ABCB5 RNF216 chr7 5711761 - ABCB5 chr7 20623265 + Exonic hg38 SARC TCGA-FX-A2QS-01A 3 18 CDS-5'UTR Intra-chr p22.1 p21.1 Seq+ 101779 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM65C-TMEM189 FAM65C chr20 50691126 - TMEM189 chr20 50143621 - Exonic hg38 SARC TCGA-FX-A2QS-01A 5 9 Out-of-frame Intra-chr q13.13 Seq+ 101780 ChimerSeq TCGA FAWG TCGA_RNA-Seq MB21D2-CTLA4 MB21D2 chr3 192917630 - CTLA4 chr2 203870586 + Exonic hg38 SARC TCGA-FX-A2QS-01A 3 14 In-Frame Inter-chr q29 q33.2 Seq+ 101781 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLIT3-TBC1D30 SLIT3 chr5 169193479 - TBC1D30 chr12 64864668 + Exonic hg38 SARC TCGA-FX-A2QS-01A 4 10 Out-of-frame Inter-chr q35.1 q14.3 Seq+ 101782 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC2-ARHGEF12 TANC2 chr17 63074014 + ARHGEF12 chr11 120446403 + Exonic hg38 SARC TCGA-FX-A2QS-01A 3 13 In-Frame Inter-chr q23.2 q23.3 Tumor suppressor gene Seq+ 101783 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLIT3-KCNMB4 SLIT3 chr5 169244705 - KCNMB4 chr12 70398729 + Exonic hg38 SARC TCGA-FX-A2QS-01A 5 3 Out-of-frame Inter-chr q35.1 q15 Seq+ 101784 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF613-UGGT1 ZNF613 chr19 51929896 + UGGT1 chr2 128145803 + Exonic hg38 SARC TCGA-FX-A2QS-01A 1 17 5'UTR-5'UTR Inter-chr q13.41 Transcription factor q14.3 101785 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAX1BP1-SYT1 TAX1BP1 chr7 27787603 + SYT1 chr12 79217503 + Exonic hg38 SARC TCGA-FX-A2QS-01A 1 16 CDS-5'UTR Inter-chr p15.2 q21.2 Seq+ 101786 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL25-GTPBP10 METTL25 chr12 82358824 + GTPBP10 chr7 90372155 + Exonic hg38 SARC TCGA-FX-A2QS-01A 3 7 Out-of-frame Inter-chr q21.31 q21.13 Seq+ 101787 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV1-BTBD9 ETV1 chr7 13931502 - BTBD9 chr6 38256516 - Exonic hg38 SARC TCGA-FX-A2QS-01A 2 9 Out-of-frame Inter-chr p21.2 Oncogene Transcription factor p21.2 Seq+ 101788 ChimerSeq TCGA FAWG TCGA_RNA-Seq RCAN2-DOCK2 RCAN2 chr6 46246748 - DOCK2 chr5 169840757 + Exonic hg38 SARC TCGA-FX-A2QS-01A 1 13 Out-of-frame Inter-chr p12.3 q35.1 101789 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH1L-SLIT3 ASH1L chr1 155562153 - SLIT3 chr5 169251459 - Exonic hg38 SARC TCGA-FX-A2QS-01A 1 11 5'UTR-CDS Inter-chr q22 Transcription factor q35.1 101790 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXW11-LMAN2 FBXW11 chr5 172006458 - LMAN2 chr5 177338605 - Exonic hg38 SARC TCGA-FX-A2QS-01A 1 10 In-Frame Intra-chr q35.1 q35.3 101791 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMC2-TENM1 SMC2 chr9 104120162 + TENM1 chrX 124963817 - Exonic hg38 SARC TCGA-FX-A2QS-01A 2 6 CDS-5'UTR Inter-chr q31.1 q25 Seq+ 101792 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO6-MSRB3 ANO6 chr12 45367793 + MSRB3 chr12 65453728 + Exonic hg38 SARC TCGA-FX-A2QS-01A 3 1 Out-of-frame Intra-chr q12 q14.3 Seq+ 101793 ChimerSeq TCGA FAWG TCGA_RNA-Seq DBF4-VAMP4 DBF4 chr7 87888059 + VAMP4 chr1 171738463 - Exonic hg38 SARC TCGA-FX-A2QS-01A 1 9 5'UTR-5'UTR Inter-chr q21.12 q24.3 101794 ChimerSeq TCGA FAWG TCGA_RNA-Seq BORCS5-SPAG9 BORCS5 chr12 12361349 + SPAG9 chr17 50998617 - Exonic hg38 SARC TCGA-FX-A2QS-01A 1 8 3'UTR-CDS Inter-chr q21.33 101795 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLDN12-EBF1 CLDN12 chr7 90494430 + EBF1 chr5 158699142 - Exonic hg38 SARC TCGA-FX-A2QS-01A 1 8 3'UTR-3'UTR Inter-chr q21.13 q33.3 Transcription factor 101796 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDCD6-COQ8B PDCD6 chr5 272772 + COQ8B chr19 40710136 - Exonic hg38 SARC TCGA-FX-A2QS-01A 1 8 In-Frame Inter-chr p15.33 q13.2 101797 ChimerSeq TCGA FAWG TCGA_RNA-Seq UMAD1-BEX5 UMAD1 chr7 7673453 + BEX5 chrX 102154810 - Exonic hg38 SARC TCGA-FX-A2QS-01A 1 8 5'UTR-5'UTR Inter-chr p21.3 q22.1 101798 ChimerSeq TCGA FAWG TCGA_RNA-Seq VAMP4-MYRFL VAMP4 chr1 171738349 - MYRFL chr12 69926571 + Exonic hg38 SARC TCGA-FX-A2QS-01A 2 4 In-Frame Inter-chr q24.3 q15 Transcription factor 101799 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF383-TEX14 ZNF383 chr19 37236074 + TEX14 chr17 58652002 - Exonic hg38 SARC TCGA-FX-A2QS-01A 1 8 CDS-5'UTR Inter-chr q13.12 Transcription factor q22 Seq+ 101800 ChimerSeq TCGA FAWG TCGA_RNA-Seq N4BP1-GPATCH2 N4BP1 chr16 48609775 - GPATCH2 chr1 217620499 - Exonic hg38 SARC TCGA-FX-A2QS-01A 2 3 Out-of-frame Inter-chr q12.1 q41 Seq+ 101801 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAP1A-MAML1 RAP1A chr1 111627563 + MAML1 chr5 179771147 + Exonic hg38 SARC TCGA-FX-A2QS-01A 1 7 5'UTR-3'UTR Inter-chr p13.2 Tumor suppressor gene 101802 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMCN1-ZSWIM4 HMCN1 chr1 186082961 + ZSWIM4 chr19 13799720 + Exonic hg38 SARC TCGA-FX-A2QS-01A 1 3 Out-of-frame Inter-chr q25.3 p13.13 Seq+ 101803 ChimerSeq TCGA FAWG TCGA_RNA-Seq HERPUD2-SCAF11 HERPUD2 chr7 35694184 - SCAF11 chr12 45964188 - Exonic hg38 SARC TCGA-FX-A2QS-01A 1 2 CDS-5'UTR Inter-chr p14.2 q12 101804 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3IP-HEPH RAB3IP chr12 69756663 + HEPH chrX 66170558 + Exonic hg38 SARC TCGA-FX-A2QS-01A 1 2 Out-of-frame Inter-chr q15 q12 101805 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMTC2-MYRFL TMTC2 chr12 82687668 + MYRFL chr12 69893763 + Exonic hg38 SARC TCGA-FX-A2QS-01A 1000 1000 Out-of-frame Intra-chr q21.31 q15 Transcription factor 101806 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRR-NAV3 PTPRR chr12 70684127 - NAV3 chr12 77966229 + Exonic hg38 SARC TCGA-FX-A2QS-01A 1000 1000 In-Frame Intra-chr q15 q21.2 Seq+ 101807 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPSF6-MYRFL CPSF6 chr12 69262561 + MYRFL chr12 69903643 + Exonic hg38 SARC TCGA-FX-A2QS-01A 1000 1000 Out-of-frame Intra-chr q15 q15 Transcription factor 101808 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAV3-EVX1 NAV3 chr12 77831704 + EVX1 chr7 27245048 + Exonic hg38 SARC TCGA-FX-A2QS-01A 1000 1000 Out-of-frame Inter-chr q21.2 p15.2 Transcription factor Seq+ 101809 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-TMTC2 FRS2 chr12 69532056 + TMTC2 chr12 82985925 + Exonic hg38 SARC TCGA-FX-A3NJ-01A 1 1 5'UTR-CDS Intra-chr q15 q21.31 Seq+ 101810 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPM-MYRFL CPM chr12 68932678 - MYRFL chr12 69952113 + Exonic hg38 SARC TCGA-FX-A3NK-01A 122 860 In-Frame Intra-chr q15 q15 Transcription factor Seq+ 101811 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRS-ANGPTL4 PTPRS chr19 5286050 - ANGPTL4 chr19 8364206 + Exonic hg38 SARC TCGA-FX-A3NK-01A 74 400 CDS-5'UTR Intra-chr p13.3 p13.2 Tumor suppressor gene Seq+ 101812 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSP2-ZDHHC17 CTDSP2 chr12 57829448 - ZDHHC17 chr12 76848233 + Exonic hg38 SARC TCGA-FX-A3NK-01A 37 229 Out-of-frame Intra-chr q14.1 q21.2 Seq+ 101813 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-PTPRQ FRS2 chr12 69470530 + PTPRQ chr12 80678602 + Exonic hg38 SARC TCGA-FX-A3NK-01A 30 229 5'UTR-CDS Intra-chr q15 q21.31 Seq+ 101814 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-DNM2 FRS2 chr12 69470530 + DNM2 chr19 10793720 + Exonic hg38 SARC TCGA-FX-A3NK-01A 12 179 5'UTR-CDS Inter-chr q15 p13.2 Seq+ 101815 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSP2-TMEM200A CTDSP2 chr12 57824029 - TMEM200A chr6 130440407 + Exonic hg38 SARC TCGA-FX-A3NK-01A 28 105 CDS-5'UTR Inter-chr q14.1 q23.1 Seq+ 101816 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPSF6-TMTC2 CPSF6 chr12 69239706 + TMTC2 chr12 82857010 + Exonic hg38 SARC TCGA-FX-A3NK-01A 18 71 Out-of-frame Intra-chr q15 q21.31 Seq+ 101817 ChimerSeq TCGA FAWG TCGA_RNA-Seq SESN1-METTL1 SESN1 chr6 108992787 - METTL1 chr12 57771257 - Exonic hg38 SARC TCGA-FX-A3NK-01A 23 45 Out-of-frame Inter-chr q21 q14.1 Seq+ 101818 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLGAP4-HM13 DLGAP4 chr20 36500611 + HM13 chr20 31514481 + Exonic hg38 SARC TCGA-FX-A3NK-01A 13 70 CDS-5'UTR Intra-chr q11.23 q11.21 Seq+ 101819 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL8-CSRP2 OSBPL8 chr12 76450851 - CSRP2 chr12 76866261 - Exonic hg38 SARC TCGA-FX-A3NK-01A 13 39 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 101820 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDM2-MYRFL MDM2 chr12 68824651 + MYRFL chr12 69855280 + Exonic hg38 SARC TCGA-FX-A3NK-01A 12 39 In-Frame Intra-chr q15 Oncogene q15 Transcription factor Seq+ 101821 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA2-TRHDE PPFIA2 chr12 81753973 - TRHDE chr12 72377995 + Exonic hg38 SARC TCGA-FX-A3NK-01A 8 44 In-Frame Intra-chr q21.31 q21.1 Seq+ 101822 ChimerSeq TCGA FAWG TCGA_RNA-Seq WASF1-SLC41A3 WASF1 chr6 110113326 - SLC41A3 chr3 126012749 - Exonic hg38 SARC TCGA-FX-A3NK-01A 9 31 In-Frame Inter-chr q21 q21.3 Seq+ 101823 ChimerSeq TCGA FAWG TCGA_RNA-Seq OS9-ZNF560 OS9 chr12 57696373 + ZNF560 chr19 9498215 - Exonic hg38 SARC TCGA-FX-A3NK-01A 5 24 CDS-5'UTR Inter-chr q13.3 p13.2 Transcription factor Seq+ 101824 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM2-PTH2R DNM2 chr19 10718403 + PTH2R chr2 208428201 + Exonic hg38 SARC TCGA-FX-A3NK-01A 7 12 Out-of-frame Inter-chr p13.2 q34 Seq+ 101825 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCA4-MYF5 SMARCA4 chr19 10961174 + MYF5 chr12 80717040 + Exonic hg38 SARC TCGA-FX-A3NK-01A 6 14 5'UTR-5'UTR Inter-chr p13.2 Oncogene Tumor suppressor gene q21.31 Transcription factor Seq+ 101826 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH3-CACNA1A NOTCH3 chr19 15197500 - CACNA1A chr19 13371779 - Exonic hg38 SARC TCGA-FX-A3NK-01A 5 12 In-Frame Intra-chr p13.12 Oncogene Tumor suppressor gene p13.13 Seq+ 101827 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC44A2-CDK19 SLC44A2 chr19 10602561 + CDK19 chr6 110670541 - Exonic hg38 SARC TCGA-FX-A3NK-01A 3 17 Out-of-frame Inter-chr p13.2 q21 Seq+ 101828 ChimerSeq TCGA FAWG TCGA_RNA-Seq VTA1-PPIL4 VTA1 chr6 142170421 + PPIL4 chr6 149505704 - Exonic hg38 SARC TCGA-FX-A3NK-01A 2 21 In-Frame Intra-chr q24.1 q25.1 Seq+ 101829 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAV3-CSRP2 NAV3 chr12 77325214 + CSRP2 chr12 76866261 - Exonic hg38 SARC TCGA-FX-A3NK-01A 3 16 5'UTR-5'UTR Intra-chr q21.2 q21.2 101830 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP8B4-LINGO1 ATP8B4 chr15 50038768 - LINGO1 chr15 77615900 - Exonic hg38 SARC TCGA-FX-A3NK-01A 3 13 Out-of-frame Intra-chr q21.2 q24.3 Seq+ 101831 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM39-OCA2 RBM39 chr20 35740824 - OCA2 chr15 27926254 - Exonic hg38 SARC TCGA-FX-A3NK-01A 3 13 5'UTR-5'UTR Inter-chr q11.22 q13.1 Seq+ 101832 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53BP1-ATP8B4 TP53BP1 chr15 43469858 - ATP8B4 chr15 50074185 - Exonic hg38 SARC TCGA-FX-A3NK-01A 3 5 Out-of-frame Intra-chr q15.3 Tumor suppressor gene q21.2 Seq+ 101833 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF560-OS9 ZNF560 chr19 9498128 - OS9 chr12 57715760 + Exonic hg38 SARC TCGA-FX-A3NK-01A 3 2 5'UTR-CDS Inter-chr p13.2 Transcription factor q13.3 101834 ChimerSeq TCGA FAWG TCGA_RNA-Seq OCA2-C20orf203 OCA2 chr15 27871154 - C20orf203 chr20 32651981 - Exonic hg38 SARC TCGA-FX-A3NK-01A 1 8 5'UTR-5'UTR Inter-chr q13.1 q11.21 101835 ChimerSeq TCGA FAWG TCGA_RNA-Seq THOP1-NOTCH3 THOP1 chr19 2785678 + NOTCH3 chr19 15197578 - Exonic hg38 SARC TCGA-FX-A3NK-01A 1 8 In-Frame Intra-chr p13.3 p13.12 Oncogene Tumor suppressor gene Seq+ 101836 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE4A-MBD3L2 PDE4A chr19 10431086 + MBD3L2 chr19 7051041 + Exonic hg38 SARC TCGA-FX-A3NK-01A 1 4 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 101837 ChimerSeq TCGA FAWG TCGA_RNA-Seq UST-TRIML1 UST chr6 148887029 + TRIML1 chr4 188142252 + Exonic hg38 SARC TCGA-FX-A3NK-01A 1 4 In-Frame Inter-chr q25.1 q35.2 101838 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEK11-FBN3 NEK11 chr3 131080588 + FBN3 chr19 8133106 - Exonic hg38 SARC TCGA-FX-A3NK-01A 1 2 Out-of-frame Inter-chr q22.1 Other:NEK p13.2 101839 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPM-BEST3 CPM chr12 68932678 - BEST3 chr12 69655813 - Exonic hg38 SARC TCGA-FX-A3NK-01A 1000 1000 Out-of-frame Intra-chr q15 q15 Seq+ 101840 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRR-COL5A3 PTPRR chr12 80619448 + COL5A3 chr19 10004063 - Exonic hg38 SARC TCGA-FX-A3NK-01A 1000 1000 Out-of-frame Inter-chr q15 p13.2 101841 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRS2-PTPRR FRS2 chr12 69470530 + PTPRR chr12 80678602 + Exonic hg38 SARC TCGA-FX-A3NK-01A 1000 1000 5'UTR-5'UTR Intra-chr q15 q15 Seq+ 101842 ChimerSeq TCGA FAWG TCGA_RNA-Seq SND1-IMMP2L SND1 chr7 127929329 + IMMP2L chr7 110663721 - Exonic hg38 SARC TCGA-FX-A3RE-01A 43 265 Out-of-frame Intra-chr q32.1 q31.1 Seq+ 101843 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R2A-SMIM19 PPP2R2A chr8 26293740 + SMIM19 chr8 42546469 + Exonic hg38 SARC TCGA-FX-A3RE-01A 6 33 Out-of-frame Intra-chr p21.2 p11.21 101844 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1QTNF6-RAC2 C1QTNF6 chr22 37185218 - RAC2 chr22 37226803 - Exonic hg38 SARC TCGA-FX-A3RE-01A 6 31 In-Frame Intra-chr q12.3 q13.1 Seq+ 101845 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKHD1-MASP2 ANKHD1 chr5 140402273 + MASP2 chr1 11030250 - Exonic hg38 SARC TCGA-FX-A3RE-01A 2 17 Out-of-frame Inter-chr q31.3 p36.22 101846 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK4-SND1 DOCK4 chr7 111736917 - SND1 chr7 128074502 + Exonic hg38 SARC TCGA-FX-A3RE-01A 2 4 Out-of-frame Intra-chr q31.1 q32.1 101847 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPM-MYRFL CPM chr12 68932678 - MYRFL chr12 69952113 + Exonic hg38 SARC TCGA-FX-A3RE-01A 2 3 In-Frame Intra-chr q15 q15 Transcription factor Seq+ 101848 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK2-NCAM1 MARK2 chr11 63895633 + NCAM1 chr11 113133449 + Exonic hg38 SARC TCGA-FX-A3TO-01A 45 298 Out-of-frame Intra-chr q13.1 CAMK:CAMKL q23.2 101849 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLAUR-WDR45 PLAUR chr19 43665316 - WDR45 chrX 49078112 - Exonic hg38 SARC TCGA-FX-A3TO-01A 32 145 CDS-5'UTR Inter-chr q13.31 p11.23 Seq+ 101850 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAG5-SDF2 SPAG5 chr17 28591698 - SDF2 chr17 28649276 - Exonic hg38 SARC TCGA-FX-A3TO-01A 19 97 In-Frame Intra-chr q11.2 q11.2 Seq+ 101851 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC17-TRIP4 DNAJC17 chr15 40807369 - TRIP4 chr15 64454997 + Exonic hg38 SARC TCGA-FX-A3TO-01A 14 80 Out-of-frame Intra-chr q15.1 q22.31 Seq+ 101852 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPRIP-OAZ2 MPRIP chr17 17042971 + OAZ2 chr15 64691591 - Exonic hg38 SARC TCGA-FX-A3TO-01A 7 66 Out-of-frame Inter-chr p11.2 q22.31 Seq+ 101853 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP10-CCL3 AKAP10 chr17 19977592 - CCL3 chr17 36089297 - Exonic hg38 SARC TCGA-FX-A3TO-01A 10 38 CDS-5'UTR Intra-chr p11.2 Seq+ 101854 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD2-CCPG1 CHD2 chr15 92901299 + CCPG1 chr15 55385714 - Exonic hg38 SARC TCGA-FX-A3TO-01A 8 43 Out-of-frame Intra-chr q26.1 q21.3 Seq+ 101855 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDIA3-EFCAB5 PDIA3 chr15 43746706 + EFCAB5 chr17 30091871 + Exonic hg38 SARC TCGA-FX-A3TO-01A 2 62 Out-of-frame Inter-chr q15.3 q11.2 101856 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEAD1-INSC TEAD1 chr11 12883125 + INSC chr11 15200824 + Exonic hg38 SARC TCGA-FX-A3TO-01A 7 27 In-Frame Intra-chr p15.3 Transcription factor p15.2 Seq+ 101857 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCPG1-YWHAE CCPG1 chr15 55356312 - YWHAE chr17 1365058 - Exonic hg38 SARC TCGA-FX-A3TO-01A 2 46 CDS-5'UTR Inter-chr q21.3 p13.3 101858 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPP8-TRPM1 DPP8 chr15 65474209 - TRPM1 chr15 31035674 - Exonic hg38 SARC TCGA-FX-A3TO-01A 6 27 CDS-5'UTR Intra-chr q22.31 q13.3 101859 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLN2-VPS13C TLN2 chr15 62390685 + VPS13C chr15 61967447 - Exonic hg38 SARC TCGA-FX-A3TO-01A 7 22 5'UTR-CDS Intra-chr q22.2 q22.2 101860 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13C-EHD4 VPS13C chr15 61964699 - EHD4 chr15 41953940 - Exonic hg38 SARC TCGA-FX-A3TO-01A 5 27 Out-of-frame Intra-chr q22.2 q15.1 101861 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-BTBD1 FBXL20 chr17 39343180 - BTBD1 chr15 83056545 - Exonic hg38 SARC TCGA-FX-A3TO-01A 8 12 In-Frame Inter-chr q12 q25.2 Seq+ 101862 ChimerSeq TCGA FAWG TCGA_RNA-Seq PYGO1-FBN1 PYGO1 chr15 55587835 - FBN1 chr15 48499038 - Exonic hg38 SARC TCGA-FX-A3TO-01A 3 28 In-Frame Intra-chr q21.3 q21.1 Seq+ 101863 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIGAR-PTPN6 TIGAR chr12 4321303 + PTPN6 chr12 6951609 + Exonic hg38 SARC TCGA-FX-A3TO-01A 4 22 In-Frame Intra-chr p13.32 p13.31 Tumor suppressor gene 101864 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPSAP2-EPN2 PRPSAP2 chr17 18877870 + EPN2 chr17 19274051 + Exonic hg38 SARC TCGA-FX-A3TO-01A 4 16 CDS-5'UTR Intra-chr p11.2 p11.2 101865 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP1-SNX1 AGAP1 chr2 236049281 + SNX1 chr15 64112573 + Exonic hg38 SARC TCGA-FX-A3TO-01A 5 7 Out-of-frame Inter-chr q37.2 q22.31 Seq+ 101866 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXDC1-ACE PLXDC1 chr17 39152546 - ACE chr17 63488648 + Exonic hg38 SARC TCGA-FX-A3TO-01A 1 18 5'UTR-CDS Intra-chr q12 q23.3 Seq+ 101867 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNAP23-CCDC144NL SNAP23 chr15 42495713 + CCDC144NL chr17 20893462 - Exonic hg38 SARC TCGA-FX-A3TO-01A 4 6 5'UTR-CDS Inter-chr q15.1 p11.2 101868 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYDGF-MAP2K3 MYDGF chr19 4659931 - MAP2K3 chr17 21298413 + Exonic hg38 SARC TCGA-FX-A3TO-01A 2 9 In-Frame Inter-chr p13.3 p11.2 STE:STE7 101869 ChimerSeq TCGA FAWG TCGA_RNA-Seq B2M-RASGRF1 B2M chr15 44711613 + RASGRF1 chr15 78973420 - Exonic hg38 SARC TCGA-FX-A3TO-01A 1 12 3'UTR-CDS Intra-chr Oncogene q25.1 101870 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC2-GCNT2 EXOC2 chr6 532469 - GCNT2 chr6 10509087 + Exonic hg38 SARC TCGA-FX-A3TO-01A 3 4 3'UTR-3'UTR Intra-chr p25.3 p24.3 Seq+ 101871 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBN1-MYO5A FBN1 chr15 48452562 - MYO5A chr15 52433285 - Exonic hg38 SARC TCGA-FX-A3TO-01A 2 8 Out-of-frame Intra-chr q21.1 q21.2 101872 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTN4RL2-P2RX3 RTN4RL2 chr11 57468090 + P2RX3 chr11 57368009 + Exonic hg38 SARC TCGA-FX-A3TO-01A 1 12 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 101873 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOX5-SPSB2 SOX5 chr12 23845983 - SPSB2 chr12 6882287 - Exonic hg38 SARC TCGA-FX-A3TO-01A 2 7 CDS-5'UTR Intra-chr p12.1 Transcription factor p13.31 Seq+ 101874 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCA1-NIPSNAP3B ABCA1 chr9 104927935 - NIPSNAP3B chr9 104770849 + Exonic hg38 SARC TCGA-FX-A3TO-01A 2 6 5'UTR-5'UTR Intra-chr q31.1 q31.1 101875 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKRIP1-TMEM248 PRKRIP1 chr7 102366076 + TMEM248 chr7 66941848 + Exonic hg38 SARC TCGA-FX-A3TO-01A 2 6 5'UTR-5'UTR Intra-chr q22.1 q11.21 101876 ChimerSeq TCGA FAWG TCGA_RNA-Seq IQGAP1-RASGRF1 IQGAP1 chr15 90390873 + RASGRF1 chr15 79006434 - Exonic hg38 SARC TCGA-FX-A3TO-01A 1 9 In-Frame Intra-chr q26.1 q25.1 Seq+ 101877 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEAD4-ERC1 TEAD4 chr12 2960196 + ERC1 chr12 1444562 + Exonic hg38 SARC TCGA-FX-A3TO-01A 1 9 5'UTR-5'UTR Intra-chr p13.33 Transcription factor Seq+ 101878 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGMS1-AGAP6 SGMS1 chr10 50433476 - AGAP6 chr10 50004685 + Exonic hg38 SARC TCGA-FX-A3TO-01A 1 8 5'UTR-5'UTR Intra-chr q11.23 Tumor suppressor gene q11.23 101879 ChimerSeq TCGA FAWG TCGA_RNA-Seq HS3ST3B1-TMEM92 HS3ST3B1 chr17 14302072 + TMEM92 chr17 50278556 + Exonic hg38 SARC TCGA-FX-A3TO-01A 2 3 In-Frame Intra-chr p12 q21.33 Seq+ 101880 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLIS3-TOP1 GLIS3 chr9 4286038 - TOP1 chr20 41061394 + Exonic hg38 SARC TCGA-FX-A3TO-01A 2 1 In-Frame Inter-chr p24.2 Transcription factor q12 Oncogene 101881 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSPG4-MYO1D CSPG4 chr15 75712668 - MYO1D chr17 32755662 - Exonic hg38 SARC TCGA-FX-A3TO-01A 1 4 Out-of-frame Inter-chr q24.2 q11.2 Seq+ 101882 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAPER-GLCE SCAPER chr15 76800248 - GLCE chr15 69255794 + Exonic hg38 SARC TCGA-FX-A3TO-01A 1 4 5'UTR-5'UTR Intra-chr q24.3 q23 Seq+ 101883 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOR1-UNC45B NCOR1 chr17 16117888 - UNC45B chr17 35148264 + Exonic hg38 SARC TCGA-FX-A3TO-01A 1 3 CDS-5'UTR Intra-chr p11.2 Oncogene q12 101884 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASGRF1-HCN4 RASGRF1 chr15 78971866 - HCN4 chr15 73343808 - Exonic hg38 SARC TCGA-FX-A3TO-01A 1 3 Out-of-frame Intra-chr q25.1 q24.1 101885 ChimerSeq TCGA FAWG TCGA_RNA-Seq SND1-IMMP2L SND1 chr7 127929329 + IMMP2L chr7 110663721 - Exonic hg38 SARC TCGA-FX-A3TO-01A 1 1 Out-of-frame Intra-chr q32.1 q31.1 Seq+ 101886 ChimerSeq TCGA FAWG TCGA_RNA-Seq POM121C-TMEM248 POM121C chr7 75484198 - TMEM248 chr7 66941848 + Exonic hg38 SARC TCGA-FX-A3TO-01A 1000 1000 3'UTR-5'UTR Intra-chr q11.23 q11.21 101887 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD2-RBM6 SETD2 chr3 47163854 - RBM6 chr3 50075201 + Exonic hg38 SARC TCGA-FX-A48G-01A 301 641 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Tumor suppressor gene Seq+ 101888 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFX2-ADK RFX2 chr19 6199476 - ADK chr10 74670183 + Exonic hg38 SARC TCGA-FX-A48G-01A 3 11 5'UTR-5'UTR Inter-chr p13.3 Transcription factor q22.2 101889 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPTOR-GPC3 RPTOR chr17 80545791 + GPC3 chrX 133953211 - Exonic hg38 SARC TCGA-FX-A48G-01A 2 15 Out-of-frame Inter-chr q25.3 q26.2 Tumor suppressor gene Seq+ 101890 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNTNAP3P2-PRUNE2 CNTNAP3P2 chr9 67059643 + PRUNE2 chr9 76826732 - Exonic hg38 SARC TCGA-FX-A48G-01A 2 6 5'UTR-CDS Intra-chr q21.11 q21.2 101891 ChimerSeq TCGA FAWG TCGA_RNA-Seq NT5C2-DLEU1 NT5C2 chr10 103139406 - DLEU1 chr13 50104704 + Exonic hg38 SARC TCGA-FX-A76Y-01A 21 116 5'UTR-5'UTR Inter-chr q24.33 q14.2 Tumor suppressor gene Seq+ 101892 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTR10-MKX ACTR10 chr14 58200294 + MKX chr10 27675554 - Exonic hg38 SARC TCGA-FX-A76Y-01A 12 34 Out-of-frame Inter-chr q23.1 p12.1 Transcription factor Seq+ 101893 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXDC2-PDCD11 PLXDC2 chr10 20177409 + PDCD11 chr10 103422988 + Exonic hg38 SARC TCGA-FX-A76Y-01A 5 20 Out-of-frame Intra-chr p12.31 q24.33 Seq+ 101894 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNMA1-ESD KCNMA1 chr10 77403862 - ESD chr13 46793444 - Exonic hg38 SARC TCGA-FX-A76Y-01A 3 14 CDS-5'UTR Inter-chr q22.3 q14.2 Seq+ 101895 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYPN-PLXDC2 MYPN chr10 68158627 + PLXDC2 chr10 20164468 + Exonic hg38 SARC TCGA-FX-A76Y-01A 3 10 Out-of-frame Intra-chr q21.3 p12.31 Seq+ 101896 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENTPD7-CYSLTR2 ENTPD7 chr10 99688750 + CYSLTR2 chr13 48691212 + Exonic hg38 SARC TCGA-FX-A76Y-01A 4 5 CDS-5'UTR Inter-chr q24.2 q14.2 101897 ChimerSeq TCGA FAWG TCGA_RNA-Seq AS3MT-HERC4 AS3MT chr10 102877035 + HERC4 chr10 67956976 - Exonic hg38 SARC TCGA-FX-A76Y-01A 1 12 Out-of-frame Intra-chr q24.32 q21.3 Seq+ 101898 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRTP1-SH3PXD2A GRTP1 chr13 113344863 - SH3PXD2A chr10 103767169 - Exonic hg38 SARC TCGA-FX-A76Y-01A 2 4 Out-of-frame Inter-chr q34 q24.33 Seq+ 101899 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF404-DMKN ZNF404 chr19 43883956 - DMKN chr19 35506185 - Exonic hg38 SARC TCGA-FX-A76Y-01A 1 3 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.12 101900 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHCHD1-R3HCC1L CHCHD1 chr10 73782441 + R3HCC1L chr10 98156093 + Exonic hg38 SARC TCGA-FX-A76Y-01A 1 2 CDS-5'UTR Intra-chr q22.2 q24.2 101901 ChimerSeq TCGA FAWG TCGA_RNA-Seq SS18-SSX2 SS18 chr18 26032399 - SSX2 chrX 52700578 - Exonic hg38 SARC TCGA-FX-A8OO-01A 65 124 CDS-5'UTR Inter-chr q11.2 p11.22 KB Pub Seq+ 101902 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPAIN-STX8 RPAIN chr17 5422829 + STX8 chr17 9250645 - Exonic hg38 SARC TCGA-HB-A2OT-01A 13 175 In-Frame Intra-chr p13.2 p13.1 Seq+ 101903 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM212B-DHRS3 FAM212B chr1 111739186 - DHRS3 chr1 12580666 - Exonic hg38 SARC TCGA-HB-A2OT-01A 22 90 Out-of-frame Intra-chr p13.2 p36.21 Seq+ 101904 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYH10-TEKT3 MYH10 chr17 8589081 - TEKT3 chr17 15314230 - Exonic hg38 SARC TCGA-HB-A2OT-01A 14 59 In-Frame Intra-chr p13.1 p12 Seq+ 101905 ChimerSeq TCGA FAWG TCGA_RNA-Seq C6orf89-SOD2 C6orf89 chr6 36926861 + SOD2 chr6 159679807 - Exonic hg38 SARC TCGA-HB-A2OT-01A 5 33 Out-of-frame Intra-chr p21.2 q25.3 Tumor suppressor gene Seq+ 101906 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREBBP-WRAP53 CREBBP chr16 3810603 - WRAP53 chr17 7688648 + Exonic hg38 SARC TCGA-HB-A2OT-01A 1 23 CDS-5'UTR Inter-chr p13.3 Oncogene Tumor suppressor gene p13.1 Seq+ 101907 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGFBPL1-FAM214B IGFBPL1 chr9 38413237 - FAM214B chr9 35108737 - Exonic hg38 SARC TCGA-HB-A2OT-01A 3 3 CDS-5'UTR Intra-chr p13.1 Tumor suppressor gene p13.3 Seq+ 101908 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA5-MMP9 ITGA5 chr12 54411834 - MMP9 chr20 46014124 + Exonic hg38 SARC TCGA-HB-A2OT-01A 1 2 In-Frame Inter-chr q13.13 Tumor suppressor gene q13.12 101909 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXW2-NXNL2 FBXW2 chr9 120787769 - NXNL2 chr9 88575087 + Exonic hg38 SARC TCGA-HB-A3L4-01A 5 14 CDS-3'UTR Intra-chr q33.2 q22.1 Seq+ 101910 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCY9-SPG20 ADCY9 chr16 3983232 - SPG20 chr13 36329517 - Exonic hg38 SARC TCGA-HB-A3L4-01A 3 13 Out-of-frame Inter-chr p13.3 q13.3 Seq+ 101911 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFT88-FAM114A1 IFT88 chr13 20583019 + FAM114A1 chr4 38905522 + Exonic hg38 SARC TCGA-HB-A3L4-01A 1 4 Out-of-frame Inter-chr q12.11 Tumor suppressor gene p14 101912 ChimerSeq TCGA FAWG TCGA_RNA-Seq RMND1-MTHFD1L RMND1 chr6 151452016 - MTHFD1L chr6 150905650 + Exonic hg38 SARC TCGA-HB-A3YV-01A 14 476 5'UTR-5'UTR Intra-chr q25.1 q25.1 Seq+ 101913 ChimerSeq TCGA FAWG TCGA_RNA-Seq YEATS4-ARFGEF3 YEATS4 chr12 69360023 + ARFGEF3 chr6 138291733 + Exonic hg38 SARC TCGA-HB-A3YV-01A 46 174 Out-of-frame Inter-chr q15 q23.3 101914 ChimerSeq TCGA FAWG TCGA_RNA-Seq VMP1-TK1 VMP1 chr17 59707748 + TK1 chr17 78175618 - Exonic hg38 SARC TCGA-HB-A3YV-01A 30 99 5'UTR-CDS Intra-chr q23.1 q25.3 Seq+ 101915 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRIK2-RNF217 GRIK2 chr6 101928632 + RNF217 chr6 125045211 + Exonic hg38 SARC TCGA-HB-A3YV-01A 33 53 In-Frame Intra-chr q16.3 q22.31 Seq+ 101916 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNA11-TMCO3 GNA11 chr19 3094787 + TMCO3 chr13 113520616 + Exonic hg38 SARC TCGA-HB-A3YV-01A 12 58 In-Frame Inter-chr p13.3 Oncogene q34 Seq+ 101917 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP12-ASCC3 AKAP12 chr6 151240724 + ASCC3 chr6 100590059 - Exonic hg38 SARC TCGA-HB-A3YV-01A 16 40 Out-of-frame Intra-chr q25.1 Tumor suppressor gene q16.3 Seq+ 101918 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDFY3-PLAGL1 WDFY3 chr4 84966209 - PLAGL1 chr6 143968978 - Exonic hg38 SARC TCGA-HB-A3YV-01A 15 34 5'UTR-5'UTR Inter-chr q21.23 q24.2 Tumor suppressor gene Transcription factor Seq+ 101919 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA2-GRIK2 LAMA2 chr6 129192853 + GRIK2 chr6 101676623 + Exonic hg38 SARC TCGA-HB-A3YV-01A 12 33 Out-of-frame Intra-chr q22.33 q16.3 Seq+ 101920 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNC-1 CCNC chr6 99568496 - 1 chr7 92468945 - Exonic hg38 SARC TCGA-HB-A3YV-01A 18 0 CDS-3'UTR Inter-chr q16.2 Tumor suppressor gene 101921 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPSF6-LAMA2 CPSF6 chr12 69239706 + LAMA2 chr6 129177706 + Exonic hg38 SARC TCGA-HB-A3YV-01A 4 50 Out-of-frame Inter-chr q15 q22.33 Seq+ 101922 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRIP1-TMEM5 GRIP1 chr12 66596847 - TMEM5 chr12 63805234 + Exonic hg38 SARC TCGA-HB-A3YV-01A 4 46 Out-of-frame Intra-chr q14.3 q14.2 Seq+ 101923 ChimerSeq TCGA FAWG TCGA_RNA-Seq OPRM1-TCEAL1 OPRM1 chr6 154246760 + TCEAL1 chrX 103629472 + Exonic hg38 SARC TCGA-HB-A3YV-01A 9 16 Out-of-frame Inter-chr q25.2 q22.2 Seq+ 101924 ChimerSeq TCGA FAWG TCGA_RNA-Seq OPRM1-TCEAL3 OPRM1 chr6 154246760 + TCEAL3 chrX 103629472 + Exonic hg38 SARC TCGA-HB-A3YV-01A 9 16 Out-of-frame Inter-chr q25.2 q22.2 Seq+ 101925 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC17-SYT1 ZDHHC17 chr12 76805439 + SYT1 chr12 78955462 + Exonic hg38 SARC TCGA-HB-A3YV-01A 4 33 CDS-5'UTR Intra-chr q21.2 q21.2 Seq+ 101926 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYT1-PPFIA2 SYT1 chr12 79047362 + PPFIA2 chr12 81457866 - Exonic hg38 SARC TCGA-HB-A3YV-01A 7 15 5'UTR-5'UTR Intra-chr q21.2 q21.31 Seq+ 101927 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYNE1-ESR1 SYNE1 chr6 152244537 - ESR1 chr6 152094385 + Exonic hg38 SARC TCGA-HB-A3YV-01A 4 25 Out-of-frame Intra-chr q25.2 Oncogene q25.1 Oncogene Tumor suppressor gene Transcription factor Seq+ 101928 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP15-DPY19L2 USP15 chr12 62325933 + DPY19L2 chr12 63591127 - Exonic hg38 SARC TCGA-HB-A3YV-01A 2 31 5'UTR-CDS Intra-chr q14.1 q14.2 Seq+ 101929 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLP1-CBARP PLP1 chrX 103776999 + CBARP chr19 1236121 - Exonic hg38 SARC TCGA-HB-A3YV-01A 3 18 CDS-5'UTR Inter-chr q22.2 p13.3 101930 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNASEH2B-AGXT2 RNASEH2B chr13 50910140 + AGXT2 chr5 35014119 - Exonic hg38 SARC TCGA-HB-A3YV-01A 4 12 Out-of-frame Inter-chr q14.3 p13.2 Seq+ 101931 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAML3-CCDC170 MAML3 chr4 139889357 - CCDC170 chr6 151548304 + Exonic hg38 SARC TCGA-HB-A3YV-01A 4 11 In-Frame Inter-chr q31.1 q25.1 Seq+ 101932 ChimerSeq TCGA FAWG TCGA_RNA-Seq RGS17-SYNE1 RGS17 chr6 153131124 - SYNE1 chr6 152488503 - Exonic hg38 SARC TCGA-HB-A3YV-01A 4 11 5'UTR-CDS Intra-chr q25.2 q25.2 Oncogene Seq+ 101933 ChimerSeq TCGA FAWG TCGA_RNA-Seq C12orf66-NXF3 C12orf66 chr12 64215678 - NXF3 chrX 103084883 - Exonic hg38 SARC TCGA-HB-A3YV-01A 4 8 Out-of-frame Inter-chr q14.2 q22.1 Seq+ 101934 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL24-REPS1 METTL24 chr6 110357955 - REPS1 chr6 138930098 - Exonic hg38 SARC TCGA-HB-A3YV-01A 4 8 Out-of-frame Intra-chr q21 q24.1 Seq+ 101935 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDP1-INA PDP1 chr8 93917079 + INA chr10 103287035 + Exonic hg38 SARC TCGA-HB-A3YV-01A 4 8 5'UTR-CDS Inter-chr q22.1 q24.33 Seq+ 101936 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXNRD2-EVX1 TXNRD2 chr22 19931030 - EVX1 chr7 27245048 + Exonic hg38 SARC TCGA-HB-A3YV-01A 5 4 In-Frame Inter-chr q11.21 p15.2 Transcription factor Seq+ 101937 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEF1DP3-BLVRB EEF1DP3 chr13 31846939 + BLVRB chr19 40458545 - Exonic hg38 SARC TCGA-HB-A3YV-01A 3 9 5'UTR-CDS Inter-chr q13.1 q13.2 Seq+ 101938 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEX3D-DOCK11 MEX3D chr19 1567464 - DOCK11 chrX 118542725 + Exonic hg38 SARC TCGA-HB-A3YV-01A 2 13 Out-of-frame Inter-chr p13.3 q24 Seq+ 101939 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESR1-SIM1 ESR1 chr6 151702005 + SIM1 chr6 100393889 - Exonic hg38 SARC TCGA-HB-A3YV-01A 2 10 5'UTR-CDS Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q16.3 Transcription factor Seq+ 101940 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAXC-MYRFL FAXC chr6 99333351 - MYRFL chr12 69855280 + Exonic hg38 SARC TCGA-HB-A3YV-01A 1 11 Out-of-frame Inter-chr q16.2 q15 Transcription factor 101941 ChimerSeq TCGA FAWG TCGA_RNA-Seq JAM3-ACAD8 JAM3 chr11 134069159 + ACAD8 chr11 134256548 + Exonic hg38 SARC TCGA-HB-A3YV-01A 1 9 In-Frame Intra-chr q25 q25 101942 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTHFD1L-ARMT1 MTHFD1L chr6 150866049 + ARMT1 chr6 151454548 + Exonic hg38 SARC TCGA-HB-A3YV-01A 2 5 In-Frame Intra-chr q25.1 q25.1 101943 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIL3-AUH NFIL3 chr9 91423640 - AUH chr9 91220992 - Exonic hg38 SARC TCGA-HB-A3YV-01A 2 5 5'UTR-CDS Intra-chr q22.31 Transcription factor q22.31 101944 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBPJ-SEL1L3 RBPJ chr4 26321048 + SEL1L3 chr4 25833569 - Exonic hg38 SARC TCGA-HB-A3YV-01A 1 8 In-Frame Intra-chr p15.2 Transcription factor p15.2 Seq+ 101945 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALX4-LMX1A ALX4 chr11 44309597 - LMX1A chr1 165213813 - Exonic hg38 SARC TCGA-HB-A3YV-01A 1 6 In-Frame Inter-chr p11.2 Transcription factor q23.3 Transcription factor Seq+ 101946 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS18A-METTL7A MRPS18A chr6 43681089 - METTL7A chr12 50924667 + Exonic hg38 SARC TCGA-HB-A3YV-01A 1 6 CDS-5'UTR Inter-chr p21.1 q13.12 101947 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFNGR1-NHSL1 IFNGR1 chr6 137219243 - NHSL1 chr6 138447193 - Exonic hg38 SARC TCGA-HB-A3YV-01A 1 5 Out-of-frame Intra-chr q23.3 q24.1 101948 ChimerSeq TCGA FAWG TCGA_RNA-Seq FLNC-COL3A1 FLNC chr7 128842698 + COL3A1 chr2 189006345 + Exonic hg38 SARC TCGA-HB-A3YV-01A 1 3 Out-of-frame Inter-chr q32.1 q32.2 101949 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB49-SUPT3H ZBTB49 chr4 4315970 + SUPT3H chr6 45020632 - Exonic hg38 SARC TCGA-HB-A3YV-01A 1 3 Out-of-frame Inter-chr p16.3 Transcription factor p21.1 101950 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMBIM4-PALLD TMBIM4 chr12 66169855 - PALLD chr4 168711581 + Exonic hg38 SARC TCGA-HB-A3YV-01A 1 2 In-Frame Inter-chr q14.3 q32.3 101951 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR13-PBX3 WDR13 chrX 48604390 + PBX3 chr9 125929655 + Exonic hg38 SARC TCGA-HB-A3YV-01A 1 2 Out-of-frame Inter-chr p11.23 q33.3 Transcription factor 101952 ChimerSeq TCGA FAWG TCGA_RNA-Seq UTRN-TNFAIP3 UTRN chr6 144426330 + TNFAIP3 chr6 137867406 + Exonic hg38 SARC TCGA-HB-A3YV-01A 1000 1000 Out-of-frame Intra-chr q24.2 q23.3 Oncogene Tumor suppressor gene 101953 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATRX-ABCB7 ATRX chrX 77785846 - ABCB7 chrX 75099062 - Exonic hg38 SARC TCGA-HB-A3YV-01A 1000 1000 Out-of-frame Intra-chr q21.1 Oncogene q13.3 Seq+ 101954 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBCD-HLCS TBCD chr17 82930643 + HLCS chr21 36767285 - Exonic hg38 SARC TCGA-HB-A43Z-01A 18 109 5'UTR-CDS Inter-chr q22.13 Seq+ 101955 ChimerSeq TCGA FAWG TCGA_RNA-Seq MATN2-POP1 MATN2 chr8 97961530 + POP1 chr8 98123336 + Exonic hg38 SARC TCGA-HB-A43Z-01A 7 51 CDS-5'UTR Intra-chr q22.1 q22.2 Seq+ 101956 ChimerSeq TCGA FAWG TCGA_RNA-Seq SARNP-MMP19 SARNP chr12 55817666 - MMP19 chr12 55842438 - Exonic hg38 SARC TCGA-HB-A43Z-01A 14 13 In-Frame Intra-chr q13.2 q13.2 Seq+ 101957 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRAF-DENND2A BRAF chr7 140834609 - DENND2A chr7 140519718 - Exonic hg38 SARC TCGA-HB-A43Z-01A 5 36 Out-of-frame Intra-chr q34 TKL:RAF Oncogene q34 Seq+ 101958 ChimerSeq TCGA FAWG TCGA_RNA-Seq VDAC2-C10orf11 VDAC2 chr10 75214070 + C10orf11 chr10 76036008 + Exonic hg38 SARC TCGA-HB-A43Z-01A 4 29 Out-of-frame Intra-chr q22.2 Seq+ 101959 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC8A1-SRSF7 SLC8A1 chr2 40428473 - SRSF7 chr2 38750194 - Exonic hg38 SARC TCGA-HB-A43Z-01A 3 10 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 101960 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBAP2-FGF7P8 UBAP2 chr9 33986760 - FGF7P8 chr9 62888535 + Exonic hg38 SARC TCGA-HB-A43Z-01A 1 8 Out-of-frame Intra-chr p13.3 q13 101961 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANK1-ZMAT4 ANK1 chr8 41708778 - ZMAT4 chr8 40697401 - Exonic hg38 SARC TCGA-HB-A43Z-01A 1 5 In-Frame Intra-chr p11.21 p11.21 Transcription factor 101962 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCMH1-HOOK3 SCMH1 chr1 41113283 - HOOK3 chr8 42906173 + Exonic hg38 SARC TCGA-HB-A5W3-01A 1 12 Out-of-frame Inter-chr p34.2 Transcription factor p11.21 Oncogene Seq+ 101963 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIT1-NNMT RIT1 chr1 155904311 - NNMT chr11 114312045 + Exonic hg38 SARC TCGA-HB-A5W3-01A 1 1 Out-of-frame Inter-chr q22 q23.2 101964 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT6B-KANSL1 KAT6B chr10 74843478 + KANSL1 chr17 46034285 - Exonic hg38 SARC TCGA-HS-A5N8-01A 7 35 3'UTR-5'UTR Inter-chr Oncogene KB Pub 101965 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM168A-SYT12 FAM168A chr11 73411394 - SYT12 chr11 67039811 + Exonic hg38 SARC TCGA-HS-A5N8-01A 4 12 In-Frame Intra-chr q13.4 q13.2 Seq+ 101966 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARL15-ITGA1 ARL15 chr5 54113202 - ITGA1 chr5 52947345 + Exonic hg38 SARC TCGA-HS-A5N8-01A 1 6 In-Frame Intra-chr q11.2 q11.2 Seq+ 101967 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF700-RAD23A ZNF700 chr19 11925273 + RAD23A chr19 12952689 + Exonic hg38 SARC TCGA-HS-A5N9-01A 180 568 In-Frame Intra-chr p13.2 Transcription factor p13.13 Seq+ 101968 ChimerSeq TCGA FAWG TCGA_RNA-Seq KPNA6-TRAIP KPNA6 chr1 32108134 + TRAIP chr3 49848200 - Exonic hg38 SARC TCGA-HS-A5N9-01A 38 24 Out-of-frame Inter-chr p35.2 p21.31 Seq+ 101969 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPC-DAG1 XPC chr3 14178466 - DAG1 chr3 49510419 + Exonic hg38 SARC TCGA-HS-A5N9-01A 8 56 5'UTR-5'UTR Intra-chr p25.1 Oncogene p21.31 Seq+ 101970 ChimerSeq TCGA FAWG TCGA_RNA-Seq SVIL-KIAA1217 SVIL chr10 29686553 - KIAA1217 chr10 24219626 + Exonic hg38 SARC TCGA-HS-A5N9-01A 2 10 5'UTR-5'UTR Intra-chr p11.23 p12.2 Seq+ 101971 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAG1-KPNA6 DAG1 chr3 49470433 + KPNA6 chr1 32154588 + Exonic hg38 SARC TCGA-HS-A5N9-01A 1 12 5'UTR-CDS Inter-chr p21.31 p35.2 101972 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASPM-F13B ASPM chr1 197142331 - F13B chr1 197039411 - Exonic hg38 SARC TCGA-HS-A5NA-01A 2 13 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 101973 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAN3-FLT3 PAN3 chr13 28139087 + FLT3 chr13 28062069 - Exonic hg38 SARC TCGA-HS-A5NA-01A 2 7 Out-of-frame Intra-chr q12.2 q12.2 TK:PDGFR Oncogene Tumor suppressor gene Seq+ 101974 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1G-LPAR1 PPM1G chr2 27387089 - LPAR1 chr9 110973558 - Exonic hg38 SARC TCGA-HS-A5NA-01A 1 8 CDS-5'UTR Inter-chr p23.3 q31.3 Seq+ 101975 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXK2-SPECC1 FOXK2 chr17 82571870 + SPECC1 chr17 20096631 + Exonic hg38 SARC TCGA-IE-A3OV-01A 21 105 CDS-5'UTR Intra-chr q25.3 Transcription factor p11.2 Seq+ 101976 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACACA-CCL5 ACACA chr17 37121355 - CCL5 chr17 35872464 - Exonic hg38 SARC TCGA-IE-A3OV-01A 8 65 5'UTR-5'UTR Intra-chr q12 Seq+ 101977 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL24-MARCH7 KLHL24 chr3 183651276 + 2019_ 3_ 7_ chr2 159762880 + Exonic hg38 SARC TCGA-IE-A3OV-01A 9 46 Out-of-frame Inter-chr q27.1 q24.2 Seq+ 101978 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIMM22-C17orf51 TIMM22 chr17 999584 + C17orf51 chr17 21535538 - Exonic hg38 SARC TCGA-IE-A3OV-01A 7 37 Out-of-frame Intra-chr p11.2 Seq+ 101979 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53-FOXK2 TP53 chr17 7687377 - FOXK2 chr17 82585904 + Exonic hg38 SARC TCGA-IE-A3OV-01A 7 37 5'UTR-CDS Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor q25.3 Transcription factor Seq+ 101980 ChimerSeq TCGA FAWG TCGA_RNA-Seq FXR2-CAB39L FXR2 chr17 7602909 - CAB39L chr13 49382941 - Exonic hg38 SARC TCGA-IE-A3OV-01A 3 42 CDS-5'UTR Inter-chr p13.1 q14.2 Seq+ 101981 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXK2-ABR FOXK2 chr17 82587272 + ABR chr17 1083627 - Exonic hg38 SARC TCGA-IE-A3OV-01A 7 16 CDS-5'UTR Intra-chr q25.3 Transcription factor p13.3 Seq+ 101982 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP11B-CCDC39 ATP11B chr3 182859359 + CCDC39 chr3 180782124 - Exonic hg38 SARC TCGA-IE-A3OV-01A 3 27 CDS-5'UTR Intra-chr q26.33 Oncogene q26.33 Seq+ 101983 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAD7-CTIF SMAD7 chr18 48948384 - CTIF chr18 48636614 + Exonic hg38 SARC TCGA-IE-A3OV-01A 2 25 CDS-3'UTR Intra-chr q21.1 Seq+ 101984 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDSUB1-FYTTD1 WDSUB1 chr2 159275546 - FYTTD1 chr3 197756426 + Exonic hg38 SARC TCGA-IE-A3OV-01A 2 23 In-Frame Inter-chr q24.2 q29 Seq+ 101985 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETDB2-AATF SETDB2 chr13 49444857 + AATF chr17 37056601 + Exonic hg38 SARC TCGA-IE-A3OV-01A 2 17 5'UTR-3'UTR Inter-chr q14.2 Transcription factor Seq+ 101986 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCTP-BRIP1 PCTP chr17 55751244 + BRIP1 chr17 61784424 - Exonic hg38 SARC TCGA-IE-A3OV-01A 5 3 In-Frame Intra-chr q22 q23.2 Oncogene 101987 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KA2-KIFC1 RPS6KA2 chr6 166626921 - KIFC1 chr6 33398029 + Exonic hg38 SARC TCGA-IE-A3OV-01A 2 12 CDS-3'UTR Intra-chr q27 Oncogene Tumor suppressor gene Seq+ 101988 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEGF8-ITPKC MEGF8 chr19 42371482 + ITPKC chr19 40725340 + Exonic hg38 SARC TCGA-IE-A3OV-01A 3 5 In-Frame Intra-chr q13.2 q13.2 Seq+ 101989 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAA38-AKAP10 NAA38 chr17 7883235 - AKAP10 chr17 19920118 - Exonic hg38 SARC TCGA-IE-A3OV-01A 3 2 5'UTR-CDS Intra-chr p13.1 p11.2 101990 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC39-PECR CCDC39 chr3 180870047 - PECR chr2 216051545 - Exonic hg38 SARC TCGA-IE-A3OV-01A 1 7 5'UTR-CDS Inter-chr q26.33 q35 Seq+ 101991 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZKSCAN8-SELENOV ZKSCAN8 chr6 28149624 + SELENOV chr19 39520146 + Exonic hg38 SARC TCGA-IE-A3OV-01A 1 7 5'UTR-5'UTR Inter-chr p22.1 Transcription factor q13.2 101992 ChimerSeq TCGA FAWG TCGA_RNA-Seq AATF-DNAH2 AATF chr17 37031685 + DNAH2 chr17 7830300 + Exonic hg38 SARC TCGA-IE-A3OV-01A 1 6 3'UTR-CDS Intra-chr p13.1 101993 ChimerSeq TCGA FAWG TCGA_RNA-Seq CIZ1-SLC16A3 CIZ1 chr9 128176351 - SLC16A3 chr17 82235983 + Exonic hg38 SARC TCGA-IE-A3OV-01A 1 6 CDS-5'UTR Inter-chr q34.11 Tumor suppressor gene q25.3 Seq+ 101994 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53-RGS9 TP53 chr17 7687377 - RGS9 chr17 65190175 + Exonic hg38 SARC TCGA-IE-A3OV-01A 1 6 5'UTR-CDS Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor q24.1 101995 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAPA-PLAC1 NAPA chr19 47514843 - PLAC1 chrX 134566740 - Exonic hg38 SARC TCGA-IE-A4EH-01A 48 151 CDS-5'UTR Inter-chr q13.33 q26.3 Seq+ 101996 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA8-MINDY3 ITGA8 chr10 15671603 - MINDY3 chr10 15847943 - Exonic hg38 SARC TCGA-IE-A4EH-01A 3 41 In-Frame Intra-chr p13 p13 101997 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPO4-PCAT19 XPO4 chr13 20799165 - PCAT19 chr19 41495427 - Exonic hg38 SARC TCGA-IE-A4EH-01A 2 18 CDS-3'UTR Inter-chr q12.11 101998 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCUN1D4-IKZF1 DCUN1D4 chr4 51891851 + IKZF1 chr7 50376533 + Exonic hg38 SARC TCGA-IE-A4EJ-01A 6 31 Out-of-frame Inter-chr q12 p12.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 101999 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIR-ZNF138 PIR chrX 15397449 - ZNF138 chr7 64831451 + Exonic hg38 SARC TCGA-IE-A4EJ-01A 4 4 In-Frame Inter-chr p22.2 q11.21 Transcription factor Seq+ 102000 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3KBP1-ZNF92 SH3KBP1 chrX 19683823 - ZNF92 chr7 65387902 + Exonic hg38 SARC TCGA-IE-A4EJ-01A 3 2 In-Frame Inter-chr p22.12 q11.21 Transcription factor Seq+ 102001 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIX-ANHX NFIX chr19 13025552 + ANHX chr12 133234378 - Exonic hg38 SARC TCGA-IE-A4EK-01A 1 3 CDS-5'UTR Inter-chr p13.13 Transcription factor q24.33 Transcription factor Seq+ 102002 ChimerSeq TCGA FAWG TCGA_RNA-Seq COX14-FBN1 COX14 chr12 50112301 + FBN1 chr15 48470756 - Exonic hg38 SARC TCGA-IE-A6BZ-01A 62 169 5'UTR-CDS Inter-chr q13.12 q21.1 Seq+ 102003 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBPMS2-FAM96A RBPMS2 chr15 64748419 - FAM96A chr15 64075537 - Exonic hg38 SARC TCGA-IE-A6BZ-01A 18 157 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 102004 ChimerSeq TCGA FAWG TCGA_RNA-Seq VEGFA-NRDC VEGFA chr6 43771312 + NRDC chr1 51840514 - Exonic hg38 SARC TCGA-IE-A6BZ-01A 18 112 Out-of-frame Inter-chr p21.1 Tumor suppressor gene p32.3 102005 ChimerSeq TCGA FAWG TCGA_RNA-Seq DUSP22-BEND6 DUSP22 chr6 311962 + BEND6 chr6 56981711 + Exonic hg38 SARC TCGA-IE-A6BZ-01A 10 68 5'UTR-5'UTR Intra-chr p25.3 Tumor suppressor gene p12.1 Seq+ 102006 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF2-CLVS1 TAF2 chr8 119831677 - CLVS1 chr8 61499455 + Exonic hg38 SARC TCGA-IE-A6BZ-01A 7 72 Out-of-frame Intra-chr q24.12 q12.2 Seq+ 102007 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAV1-TIMM17A NAV1 chr1 201718755 + TIMM17A chr1 201957281 + Exonic hg38 SARC TCGA-IE-A6BZ-01A 11 53 In-Frame Intra-chr q32.1 q32.1 Seq+ 102008 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL16-FXR2 METTL16 chr17 2502204 - FXR2 chr17 7604080 - Exonic hg38 SARC TCGA-IE-A6BZ-01A 1 26 Out-of-frame Intra-chr p13.3 p13.1 Seq+ 102009 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDLR-TNPO2 LDLR chr19 11123344 + TNPO2 chr19 12706795 - Exonic hg38 SARC TCGA-IE-A6BZ-01A 1 19 In-Frame Intra-chr p13.2 p13.13 Seq+ 102010 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCT2-CACNG3 CCT2 chr12 69585524 + CACNG3 chr16 24361352 + Exonic hg38 SARC TCGA-IE-A6BZ-01A 1 1 Out-of-frame Inter-chr q15 p12.1 Seq+ 102011 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT2-ZDHHC17 CNOT2 chr12 70278274 + ZDHHC17 chr12 76845709 + Exonic hg38 SARC TCGA-IF-A3RQ-01A 8 121 In-Frame Intra-chr q15 q21.2 Seq+ 102012 ChimerSeq TCGA FAWG TCGA_RNA-Seq NHSL1-ARFGEF3 NHSL1 chr6 138496219 - ARFGEF3 chr6 138170662 + Exonic hg38 SARC TCGA-IF-A3RQ-01A 28 37 In-Frame Intra-chr q24.1 q23.3 102013 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSP2-HMGA2 CTDSP2 chr12 57846372 - HMGA2 chr12 65951383 + Exonic hg38 SARC TCGA-IF-A3RQ-01A 11 35 Out-of-frame Intra-chr q14.1 q14.3 Transcription factor Seq+ 102014 ChimerSeq TCGA FAWG TCGA_RNA-Seq UTRN-HMGA2 UTRN chr6 144700243 + HMGA2 chr12 65838519 + Exonic hg38 SARC TCGA-IF-A3RQ-01A 2 25 In-Frame Inter-chr q24.2 q14.3 Transcription factor Seq+ 102015 ChimerSeq TCGA FAWG TCGA_RNA-Seq AXDND1-UNC79 AXDND1 chr1 179534962 + UNC79 chr14 93704625 + Exonic hg38 SARC TCGA-IF-A3RQ-01A 6 1 CDS-3'UTR Inter-chr q25.2 102016 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3IP-AVIL RAB3IP chr12 69795344 + AVIL chr12 57814226 - Exonic hg38 SARC TCGA-IF-A3RQ-01A 2 5 In-Frame Intra-chr q15 q14.1 Seq+ 102017 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K13-FETUB MAP3K13 chr3 185285643 + FETUB chr3 186651218 + Exonic hg38 SARC TCGA-IF-A3RQ-01A 1 7 Out-of-frame Intra-chr q27.2 q27.3 Seq+ 102018 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L2-PTPRK EPB41L2 chr6 130955105 - PTPRK chr6 128009268 - Exonic hg38 SARC TCGA-IF-A3RQ-01A 1 6 CDS-5'UTR Intra-chr q23.2 Tumor suppressor gene Seq+ 102019 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRK-SYT1 FRK chr6 115967551 - SYT1 chr12 79217503 + Exonic hg38 SARC TCGA-IF-A3RQ-01A 1 5 CDS-5'UTR Inter-chr q22.1 TK:Src Tumor suppressor gene q21.2 Seq+ 102020 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDM2-ZCCHC5 MDM2 chr12 68836749 + ZCCHC5 chrX 78658648 - Exonic hg38 SARC TCGA-IF-A3RQ-01A 1 5 Out-of-frame Inter-chr q15 Oncogene 102021 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRD-TRHDE PTPRD chr9 8857638 - TRHDE chr12 72499498 + Exonic hg38 SARC TCGA-IF-A3RQ-01A 1 5 5'UTR-CDS Inter-chr Oncogene Tumor suppressor gene q21.1 Seq+ 102022 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1orf132-CD34 C1orf132 chr1 207806005 - CD34 chr1 207889621 - Exonic hg38 SARC TCGA-IF-A4AK-01A 6 20 Out-of-frame Intra-chr q32.2 q32.2 102023 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRTP1-SPATC1L GRTP1 chr13 113355323 - SPATC1L chr21 46162067 - Exonic hg38 SARC TCGA-IF-A4AK-01A 2 15 CDS-5'UTR Inter-chr q34 102024 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK7-NMT2 DOCK7 chr1 62688227 - NMT2 chr10 15141557 - Exonic hg38 SARC TCGA-IF-A4AK-01A 3 6 In-Frame Inter-chr p31.3 p13 Seq+ 102025 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPF38A-CDNF PRPF38A chr1 52411200 + CDNF chr10 14825620 - Exonic hg38 SARC TCGA-IF-A4AK-01A 3 5 In-Frame Inter-chr p32.3 p13 Seq+ 102026 ChimerSeq TCGA FAWG TCGA_RNA-Seq LSS-EIF4ENIF1 LSS chr21 46205836 - EIF4ENIF1 chr22 31463967 - Exonic hg38 SARC TCGA-IF-A4AK-01A 2 4 5'UTR-CDS Inter-chr q22.3 q12.2 Seq+ 102027 ChimerSeq TCGA FAWG TCGA_RNA-Seq RB1-FRYL RB1 chr13 48465368 + FRYL chr4 48634490 - Exonic hg38 SARC TCGA-IF-A4AK-01A 1 7 CDS-5'UTR Inter-chr q14.2 Oncogene Tumor suppressor gene p11 Seq+ 102028 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIC-MPND NFIC chr19 3366666 + MPND chr19 4357253 + Exonic hg38 SARC TCGA-IF-A4AK-01A 1 3 In-Frame Intra-chr p13.3 Transcription factor p13.3 102029 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3CB-CEP70 PIK3CB chr3 138834695 - CEP70 chr3 138532570 - Exonic hg38 SARC TCGA-IS-A3K6-01A 1 44 5'UTR-CDS Intra-chr q22.3 Oncogene q22.3 102030 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPM3-KCNN3 TPM3 chr1 154169305 - KCNN3 chr1 154822184 - Exonic hg38 SARC TCGA-IS-A3K6-01A 2 11 Out-of-frame Intra-chr q21.3 q21.3 102031 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACBD6-CCDC122 ACBD6 chr1 180314692 - CCDC122 chr13 43837429 - Exonic hg38 SARC TCGA-IS-A3K6-01A 1 8 Out-of-frame Inter-chr q25.3 q14.11 Seq+ 102032 ChimerSeq TCGA FAWG TCGA_RNA-Seq MREG-SPAG17 MREG chr2 216013233 - SPAG17 chr1 117954049 - Exonic hg38 SARC TCGA-IS-A3K7-01A 6 38 CDS-3'UTR Inter-chr q35 p12 Seq+ 102033 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTN-CHRNA1 TTN chr2 178729288 - CHRNA1 chr2 174784869 - Exonic hg38 SARC TCGA-IS-A3K7-01A 2 26 CDS-5'UTR Intra-chr q31.2 CAMK:MLCK q31.1 102034 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANBP10-USP10 RANBP10 chr16 67772034 - USP10 chr16 84716195 + Exonic hg38 SARC TCGA-IS-A3K7-01A 4 8 5'UTR-5'UTR Intra-chr q22.1 q24.1 Seq+ 102035 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM2B-CORO1C KDM2B chr12 121439857 - CORO1C chr12 108701323 - Exonic hg38 SARC TCGA-IS-A3K7-01A 4 5 In-Frame Intra-chr q24.31 Transcription factor q24.11 Seq+ 102036 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLC1-APOPT1 KLC1 chr14 103629494 + APOPT1 chr14 103590181 + Exonic hg38 SARC TCGA-IS-A3KA-01A 4 4 Out-of-frame Intra-chr q32.33 q32.33 Seq+ 102037 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMTR1-KIF6 CMTR1 chr6 37453312 + KIF6 chr6 39691862 - Exonic hg38 SARC TCGA-IS-A3KA-01A 2 10 Out-of-frame Intra-chr p21.2 p21.2 102038 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF638-EIF3B ZNF638 chr2 71388723 + EIF3B chr7 2376950 + Exonic hg38 SARC TCGA-IS-A3KA-01A 2 1 Out-of-frame Inter-chr p13.3 p22.3 102039 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP20-CDRT4 USP20 chr9 129858112 + CDRT4 chr17 15440285 - Exonic hg38 SARC TCGA-IW-A3M4-01A 1 20 CDS-5'UTR Inter-chr q34.11 p12 102040 ChimerSeq TCGA FAWG TCGA_RNA-Seq TVP23C-USP20 TVP23C chr17 15545785 - USP20 chr9 129858050 + Exonic hg38 SARC TCGA-IW-A3M4-01A 3 8 In-Frame Inter-chr p12 q34.11 102041 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZCRB1-YAF2 ZCRB1 chr12 42325924 - YAF2 chr12 42210619 - Exonic hg38 SARC TCGA-IW-A3M4-01A 1 8 5'UTR-CDS Intra-chr q12 q12 102042 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDRT4-USP20 CDRT4 chr17 15503098 - USP20 chr9 129858050 + Exonic hg38 SARC TCGA-IW-A3M4-01A 1 7 5'UTR-CDS Inter-chr p12 q34.11 102043 ChimerSeq TCGA FAWG TCGA_RNA-Seq DST-RBM24 DST chr6 56489490 - RBM24 chr6 17291756 + Exonic hg38 SARC TCGA-IW-A3M4-01A 1 6 Out-of-frame Intra-chr p12.1 Oncogene p22.3 102044 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTG2-ALK ACTG2 chr2 73901437 + ALK chr2 29227074 - Exonic hg38 SARC TCGA-IW-A3M6-01A 204 1535 Out-of-frame Intra-chr p13.1 p23.1 TK:ALK Oncogene Seq+ 102045 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP205-SERPINA12 NUP205 chr7 135597418 + SERPINA12 chr14 94498430 - Exonic hg38 SARC TCGA-IW-A3M6-01A 15 73 CDS-5'UTR Inter-chr q33 q32.13 Seq+ 102046 ChimerSeq TCGA FAWG TCGA_RNA-Seq TARSL2-NET1 TARSL2 chr15 101664170 - NET1 chr10 5451830 + Exonic hg38 SARC TCGA-IW-A3M6-01A 3 3 CDS-5'UTR Inter-chr q26.3 p15.1 102047 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLOD4-NPLOC4 GLOD4 chr17 769869 - NPLOC4 chr17 81622278 - Exonic hg38 SARC TCGA-JV-A5VE-01A 5 22 In-Frame Intra-chr p13.3 q25.3 Seq+ 102048 ChimerSeq TCGA FAWG TCGA_RNA-Seq AEBP2-LMO3 AEBP2 chr12 19493986 + LMO3 chr12 16600868 - Exonic hg38 SARC TCGA-JV-A5VE-01A 4 18 In-Frame Intra-chr p12.3 Transcription factor p12.3 Seq+ 102049 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTDH-MAL2 MTDH chr8 97661173 + MAL2 chr8 119221587 + Exonic hg38 SARC TCGA-JV-A5VE-01A 1 15 In-Frame Intra-chr q22.1 q24.12 102050 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL3-PPP5C BCL3 chr19 44751380 + PPP5C chr19 46375604 + Exonic hg38 SARC TCGA-JV-A5VF-01A 3 7 Out-of-frame Intra-chr q13.32 Oncogene q13.32 102051 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO10-RB1 MYO10 chr5 16689824 - RB1 chr13 48360017 + Exonic hg38 SARC TCGA-JV-A5VF-01A 1 5 Out-of-frame Inter-chr p15.1 q14.2 Oncogene Tumor suppressor gene 102052 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBA2-SMIM17 UBA2 chr19 34464131 + SMIM17 chr19 56655103 + Exonic hg38 SARC TCGA-JV-A75J-01A 1 132 Out-of-frame Intra-chr q13.11 q13.43 102053 ChimerSeq TCGA FAWG TCGA_RNA-Seq PANK1-CRYBB1 PANK1 chr10 89644600 - CRYBB1 chr22 26612190 - Exonic hg38 SARC TCGA-JV-A75J-01A 18 37 Out-of-frame Inter-chr q23.31 q12.1 Seq+ 102054 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUBP2-RHOT2 NUBP2 chr16 1783036 + RHOT2 chr16 672686 + Exonic hg38 SARC TCGA-JV-A75J-01A 11 51 5'UTR-5'UTR Intra-chr p13.3 p13.3 102055 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-RPTOR NF1 chr17 31095369 + RPTOR chr17 80625691 + Exonic hg38 SARC TCGA-JV-A75J-01A 13 30 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q25.3 Seq+ 102056 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2AK1-PHF14 EIF2AK1 chr7 6054546 - PHF14 chr7 11051612 + Exonic hg38 SARC TCGA-JV-A75J-01A 13 26 Out-of-frame Intra-chr p22.1 p21.3 Seq+ 102057 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNA12-CUL1 GNA12 chr7 2794928 - CUL1 chr7 148729962 + Exonic hg38 SARC TCGA-JV-A75J-01A 5 37 CDS-5'UTR Intra-chr p22.2 q36.1 Tumor suppressor gene Seq+ 102058 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSMCE2-COL22A1 NSMCE2 chr8 125182256 + COL22A1 chr8 138844158 - Exonic hg38 SARC TCGA-JV-A75J-01A 10 17 In-Frame Intra-chr q24.13 q24.3 Seq+ 102059 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCR-1572G7.5 BCR chr22 23295155 + 1572G7.5 chr22 23607042 + Exonic hg38 SARC TCGA-JV-A75J-01A 7 12 Out-of-frame Intra-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene 102060 ChimerSeq TCGA FAWG TCGA_RNA-Seq FSCN1-CLIC2 FSCN1 chr7 5593768 + CLIC2 chrX 155299145 - Exonic hg38 SARC TCGA-JV-A75J-01A 5 14 CDS-5'UTR Inter-chr p22.1 q28 102061 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUBP2-RHBDL1 NUBP2 chr16 1783036 + RHBDL1 chr16 676971 + Exonic hg38 SARC TCGA-JV-A75J-01A 7 6 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 102062 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOM1-UVRAG NOM1 chr7 156950724 + UVRAG chr11 76065710 + Exonic hg38 SARC TCGA-JV-A75J-01A 4 16 Out-of-frame Inter-chr q36.3 q13.5 Tumor suppressor gene Seq+ 102063 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANSL1-WRAP53 KANSL1 chr17 46223671 - WRAP53 chr17 7688648 + Exonic hg38 SARC TCGA-JV-A75J-01A 1 27 5'UTR-5'UTR Intra-chr p13.1 102064 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC7A1-AKNA SLC7A1 chr13 29595416 - AKNA chr9 114381446 - Exonic hg38 SARC TCGA-JV-A75J-01A 3 12 5'UTR-5'UTR Inter-chr q12.3 q32 Transcription factor Seq+ 102065 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSMCE2-EXT1 NSMCE2 chr8 125156098 + EXT1 chr8 117804893 - Exonic hg38 SARC TCGA-JV-A75J-01A 1 19 5'UTR-CDS Intra-chr q24.13 q24.11 Oncogene Tumor suppressor gene Seq+ 102066 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUZ12P1-GID4 SUZ12P1 chr17 30784892 + GID4 chr17 18065180 + Exonic hg38 SARC TCGA-JV-A75J-01A 1 19 5'UTR-CDS Intra-chr q11.2 p11.2 102067 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTAF1-HOGA1 BTAF1 chr10 91953873 + HOGA1 chr10 97601857 + Exonic hg38 SARC TCGA-JV-A75J-01A 1 15 Out-of-frame Intra-chr q23.32 q24.2 Seq+ 102068 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSK3A-ZSCAN5A GSK3A chr19 42239955 - ZSCAN5A chr19 56274908 - Exonic hg38 SARC TCGA-JV-A75J-01A 3 6 CDS-5'UTR Intra-chr q13.2 CMGC:GSK q13.43 Transcription factor 102069 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCNT-NSMCE2 PCNT chr21 46351540 + NSMCE2 chr8 125151171 + Exonic hg38 SARC TCGA-JV-A75J-01A 1 13 In-Frame Inter-chr q22.3 q24.13 Seq+ 102070 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCRIB-FER1L6 SCRIB chr8 143809551 - FER1L6 chr8 124082288 + Exonic hg38 SARC TCGA-JV-A75J-01A 1 10 5'UTR-CDS Intra-chr Tumor suppressor gene q24.13 102071 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKNA-ENOX1 AKNA chr9 114387860 - ENOX1 chr13 43667544 - Exonic hg38 SARC TCGA-JV-A75J-01A 1 9 5'UTR-5'UTR Inter-chr q32 Transcription factor q14.11 Seq+ 102072 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP35-SAE1 ARHGAP35 chr19 46937408 + SAE1 chr19 47143494 + Exonic hg38 SARC TCGA-K1-A3PN-01A 1 9 Out-of-frame Intra-chr q13.32 Transcription factor q13.32 Seq+ 102073 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOT1L-SSBP3 DOT1L chr19 2164265 + SSBP3 chr1 54228826 - Exonic hg38 SARC TCGA-K1-A3PO-01A 8 44 In-Frame Inter-chr p13.3 Oncogene Transcription factor p32.3 Seq+ 102074 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCMH1-CASP9 SCMH1 chr1 41242059 - CASP9 chr1 15518395 - Exonic hg38 SARC TCGA-K1-A3PO-01A 12 20 5'UTR-5'UTR Intra-chr p34.2 Transcription factor p36.21 Seq+ 102075 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKD3-TMEM51 PRKD3 chr2 37293133 - TMEM51 chr1 15210490 + Exonic hg38 SARC TCGA-K1-A3PO-01A 2 17 CDS-5'UTR Inter-chr p22.2 p36.21 Seq+ 102076 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP35-C2orf61 ARHGAP35 chr19 46937408 + C2orf61 chr2 47170764 - Exonic hg38 SARC TCGA-K1-A3PO-01A 3 4 Out-of-frame Inter-chr q13.32 Transcription factor 102077 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP35-CALM2 ARHGAP35 chr19 46937408 + CALM2 chr2 47170764 - Exonic hg38 SARC TCGA-K1-A3PO-01A 3 4 Out-of-frame Inter-chr q13.32 Transcription factor p21 Seq+ 102078 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPSB1-TAF12 SPSB1 chr1 9293071 + TAF12 chr1 28622165 - Exonic hg38 SARC TCGA-K1-A3PO-01A 1000 1000 5'UTR-5'UTR Intra-chr p36.22 p35.3 Seq+ 102079 ChimerSeq TCGA FAWG TCGA_RNA-Seq NTMT1-ZNF208 NTMT1 chr9 129626295 + ZNF208 chr19 21988909 - Exonic hg38 SARC TCGA-K1-A42W-01A 1 4 5'UTR-CDS Inter-chr q34.11 p12 Transcription factor 102080 ChimerSeq TCGA FAWG TCGA_RNA-Seq LATS2-MYLK LATS2 chr13 21061346 - MYLK chr3 123667187 - Exonic hg38 SARC TCGA-K1-A42X-01A 28 190 5'UTR-CDS Inter-chr q12.11 AGC:NDR Tumor suppressor gene q21.1 Seq+ 102081 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF236-QRSL1 ZNF236 chr18 76851939 + QRSL1 chr6 106640349 + Exonic hg38 SARC TCGA-K1-A42X-01A 17 48 In-Frame Inter-chr q23 Transcription factor q21 Seq+ 102082 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATRN-UQCRB ATRN chr20 3560905 + UQCRB chr8 96233227 - Exonic hg38 SARC TCGA-K1-A42X-01A 8 52 In-Frame Inter-chr p13 q22.1 Seq+ 102083 ChimerSeq TCGA FAWG TCGA_RNA-Seq PALM2-PCP4 PALM2 chr9 109932028 + PCP4 chr21 39898476 + Exonic hg38 SARC TCGA-K1-A42X-01A 3 45 Out-of-frame Inter-chr q31.3 q22.2 Seq+ 102084 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOPBP1-SPDEF TOPBP1 chr3 133623091 - SPDEF chr6 34544484 - Exonic hg38 SARC TCGA-K1-A42X-01A 6 23 CDS-5'UTR Inter-chr q22.1 p21.31 Transcription factor Seq+ 102085 ChimerSeq TCGA FAWG TCGA_RNA-Seq HHIPL1-CCNK HHIPL1 chr14 99645462 + CCNK chr14 99507076 + Exonic hg38 SARC TCGA-K1-A42X-01A 2 7 Out-of-frame Intra-chr q32.2 q32.2 Seq+ 102086 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDLIM1-PLCE1 PDLIM1 chr10 95263864 - PLCE1 chr10 94227306 + Exonic hg38 SARC TCGA-K1-A42X-01A 2 7 Out-of-frame Intra-chr q23.33 q23.33 Tumor suppressor gene Seq+ 102087 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOCS7-SMIM25 SOCS7 chr17 38368050 + SMIM25 chr20 50275646 + Exonic hg38 SARC TCGA-K1-A42X-01A 1 3 3'UTR-5'UTR Inter-chr q12 q13.13 102088 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS45-PSMB4 VPS45 chr1 150072226 + PSMB4 chr1 151401817 + Exonic hg38 SARC TCGA-K1-A6RT-01A 4 19 Out-of-frame Intra-chr q21.2 q21.3 Seq+ 102089 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6R3-ATP6V0D2 PPP6R3 chr11 68460827 + ATP6V0D2 chr8 86098904 + Exonic hg38 SARC TCGA-K1-A6RT-01A 2 9 5'UTR-5'UTR Inter-chr q13.2 q21.3 Seq+ 102090 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK1-YPEL1 MAPK1 chr22 21867322 - YPEL1 chr22 21710908 - Exonic hg38 SARC TCGA-K1-A6RT-01A 2 6 CDS-5'UTR Intra-chr q11.22 Oncogene q11.22 Seq+ 102091 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGPS1-NUP210L RALGPS1 chr9 126915012 + NUP210L chr1 153995180 - Exonic hg38 SARC TCGA-K1-A6RT-01A 2 6 5'UTR-CDS Inter-chr q33.3 q21.3 Seq+ 102092 ChimerSeq TCGA FAWG TCGA_RNA-Seq P2RX5-TRPV1 P2RX5 chr17 3679590 - TRPV1 chr17 3572249 - Exonic hg38 SARC TCGA-K1-A6RU-01A 28 103 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 102093 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM102A-RAD23B FAM102A chr9 127979992 - RAD23B chr9 107318752 + Exonic hg38 SARC TCGA-K1-A6RU-01A 26 40 Out-of-frame Intra-chr q34.11 q31.2 Tumor suppressor gene Seq+ 102094 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTAN1-TBC1D13 SPTAN1 chr9 128552696 + TBC1D13 chr9 128788334 + Exonic hg38 SARC TCGA-K1-A6RU-01A 15 32 5'UTR-CDS Intra-chr q34.11 q34.11 Seq+ 102095 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53-ELL TP53 chr17 7687377 - ELL chr19 18450975 - Exonic hg38 SARC TCGA-K1-A6RU-01A 12 31 5'UTR-CDS Inter-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.11 102096 ChimerSeq TCGA FAWG TCGA_RNA-Seq SVEP1-TJP2 SVEP1 chr9 110512926 - TJP2 chr9 69249375 + Exonic hg38 SARC TCGA-K1-A6RU-01A 9 36 Out-of-frame Intra-chr q31.3 q21.11 Seq+ 102097 ChimerSeq TCGA FAWG TCGA_RNA-Seq RMI1-LCN2 RMI1 chr9 83980891 + LCN2 chr9 128151638 + Exonic hg38 SARC TCGA-K1-A6RU-01A 4 45 5'UTR-CDS Intra-chr q21.32 q34.11 Seq+ 102098 ChimerSeq TCGA FAWG TCGA_RNA-Seq CORO1C-RBFOX1 CORO1C chr12 108701124 - RBFOX1 chr16 7518147 + Exonic hg38 SARC TCGA-K1-A6RU-01A 6 13 In-Frame Inter-chr q24.11 p13.3 Seq+ 102099 ChimerSeq TCGA FAWG TCGA_RNA-Seq SULF2-TSHZ2 SULF2 chr20 47736703 - TSHZ2 chr20 53487144 + Exonic hg38 SARC TCGA-K1-A6RU-01A 3 21 CDS-3'UTR Intra-chr q13.12 q13.2 Transcription factor Seq+ 102100 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKT2-SMIM17 AKT2 chr19 40256926 - SMIM17 chr19 56645568 + Exonic hg38 SARC TCGA-K1-A6RU-01A 7 3 5'UTR-5'UTR Intra-chr q13.2 AGC:Akt Oncogene q13.43 102101 ChimerSeq TCGA FAWG TCGA_RNA-Seq APBA1-SUSD1 APBA1 chr9 69456247 - SUSD1 chr9 112041960 - Exonic hg38 SARC TCGA-K1-A6RU-01A 3 17 3'UTR-CDS Intra-chr q21.12 q32 Seq+ 102102 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP188-APBA1 NUP188 chr9 128952846 + APBA1 chr9 69517279 - Exonic hg38 SARC TCGA-K1-A6RU-01A 2 17 CDS-3'UTR Intra-chr q34.11 q21.12 102103 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPBP1-DERL2 GPBP1 chr5 57261282 + DERL2 chr17 5477999 - Exonic hg38 SARC TCGA-K1-A6RU-01A 2 10 CDS-3'UTR Inter-chr q11.2 Transcription factor p13.2 102104 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP2-AGTPBP1 AKAP2 chr9 110048855 + AGTPBP1 chr9 85712566 - Exonic hg38 SARC TCGA-K1-A6RU-01A 3 2 Out-of-frame Intra-chr q31.3 q21.33 Seq+ 102105 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM207A-FER FAM207A chr21 44960168 + FER chr5 109100396 + Exonic hg38 SARC TCGA-K1-A6RU-01A 2 4 In-Frame Inter-chr q22.3 q21.3 TK:Fer 102106 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGTPBP1-DAPK1 AGTPBP1 chr9 85741775 - DAPK1 chr9 87637943 + Exonic hg38 SARC TCGA-K1-A6RU-01A 1 4 In-Frame Intra-chr q21.33 q21.33 CAMK:DAPK Tumor suppressor gene Seq+ 102107 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKIV2L2-GPBP1 SKIV2L2 chr5 55308147 + GPBP1 chr5 57214074 + Exonic hg38 SARC TCGA-K1-A6RU-01A 1 4 Out-of-frame Intra-chr q11.2 q11.2 Transcription factor Seq+ 102108 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR1-SLC2A9 WDR1 chr4 10077304 - SLC2A9 chr4 9835008 - Exonic hg38 SARC TCGA-K1-A6RV-01A 93 476 In-Frame Intra-chr p16.1 p16.1 Seq+ 102109 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT13-SMYD1 GALNT13 chr2 154140505 + SMYD1 chr2 88084316 + Exonic hg38 SARC TCGA-K1-A6RV-01A 15 44 In-Frame Intra-chr q23.3 p11.2 Seq+ 102110 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDCD11-FBXL15 PDCD11 chr10 103406790 + FBXL15 chr10 102421052 + Exonic hg38 SARC TCGA-K1-A6RV-01A 13 41 CDS-5'UTR Intra-chr q24.33 q24.32 Seq+ 102111 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPAT3-COPS4 GPAT3 chr4 83544602 + COPS4 chr4 83066438 + Exonic hg38 SARC TCGA-K1-A6RV-01A 10 46 In-Frame Intra-chr q21.23 q21.22 102112 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPAS2-EXT2 NPAS2 chr2 100820414 + EXT2 chr11 44232353 + Exonic hg38 SARC TCGA-K1-A6RV-01A 10 12 5'UTR-CDS Inter-chr q11.2 Tumor suppressor gene Transcription factor p11.2 Oncogene Tumor suppressor gene Seq+ 102113 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB20-TESMIN ZBTB20 chr3 114500352 - TESMIN chr11 68708500 - Exonic hg38 SARC TCGA-K1-A6RV-01A 3 26 5'UTR-CDS Inter-chr q13.31 Transcription factor q13.3 102114 ChimerSeq TCGA FAWG TCGA_RNA-Seq NTM-SORL1 NTM chr11 131911648 + SORL1 chr11 121605113 + Exonic hg38 SARC TCGA-K1-A6RV-01A 2 25 Out-of-frame Intra-chr q25 q24.1 Seq+ 102115 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIP2C-ORC4 DIP2C chr10 689494 - ORC4 chr2 147975975 - Exonic hg38 SARC TCGA-K1-A6RV-01A 4 9 CDS-5'UTR Inter-chr p15.3 q23.1 Seq+ 102116 ChimerSeq TCGA FAWG TCGA_RNA-Seq LTN1-RPL39P40 LTN1 chr21 28982316 - RPL39P40 chr21 17500804 - Exonic hg38 SARC TCGA-K1-A6RV-01A 4 5 Out-of-frame Intra-chr q21.3 q21.1 Seq+ 102117 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASA1-XRCC4 RASA1 chr5 87349364 + XRCC4 chr5 83353125 + Exonic hg38 SARC TCGA-K1-A6RV-01A 1 9 In-Frame Intra-chr q14.3 q14.2 Seq+ 102118 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANXA7-DNAJC9 ANXA7 chr10 73387689 - DNAJC9 chr10 73183576 - Exonic hg38 SARC TCGA-K1-A6RV-01A 1 5 CDS-3'UTR Intra-chr q22.2 Tumor suppressor gene q22.2 102119 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHSY3-RBM22 CHSY3 chr5 129908360 + RBM22 chr5 150698631 - Exonic hg38 SARC TCGA-KD-A5QS-01A 10 67 In-Frame Intra-chr q23.3 q33.1 Seq+ 102120 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM118A-VAPB FAM118A chr22 45310183 + VAPB chr20 58434602 + Exonic hg38 SARC TCGA-KD-A5QS-01A 2 25 5'UTR-CDS Inter-chr q13.31 q13.32 Seq+ 102121 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGB1P10-CCNA1 HMGB1P10 chr22 26560994 + CCNA1 chr13 36437627 + Exonic hg38 SARC TCGA-KD-A5QS-01A 3 16 Out-of-frame Inter-chr q12.1 q13.3 Seq+ 102122 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMOTL1-PIWIL4 AMOTL1 chr11 94768560 + PIWIL4 chr11 94607439 + Exonic hg38 SARC TCGA-KD-A5QS-01A 2 4 Out-of-frame Intra-chr q21 q21 Seq+ 102123 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP26-PRMT8 ARHGAP26 chr5 142770915 + PRMT8 chr12 3549936 + Exonic hg38 SARC TCGA-KD-A5QS-01A 1 7 Out-of-frame Inter-chr q31.3 p13.32 102124 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSRP1-ATG13 CSRP1 chr1 201496192 - ATG13 chr11 46630045 + Exonic hg38 SARC TCGA-KD-A5QS-01A 1 7 CDS-5'UTR Inter-chr q32.1 p11.2 102125 ChimerSeq TCGA FAWG TCGA_RNA-Seq HEATR6-STXBP4 HEATR6 chr17 60076130 - STXBP4 chr17 55031168 + Exonic hg38 SARC TCGA-KD-A5QS-01A 1 7 In-Frame Intra-chr q23.1 q22 Seq+ 102126 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIBF1-ELDR PIBF1 chr13 72854155 + ELDR chr7 55238666 - Exonic hg38 SARC TCGA-KD-A5QS-01A 1 7 CDS-3'UTR Inter-chr q21.33 102127 ChimerSeq TCGA FAWG TCGA_RNA-Seq WASHC4-PRDM4 WASHC4 chr12 105121204 + PRDM4 chr12 107754109 - Exonic hg38 SARC TCGA-KD-A5QS-01A 2 3 Out-of-frame Intra-chr q23.3 q23.3 Tumor suppressor gene Transcription factor 102128 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3GL1-ZIC1 SH3GL1 chr19 4400324 - ZIC1 chr3 147412518 + Exonic hg38 SARC TCGA-KD-A5QS-01A 2 1 Out-of-frame Inter-chr p13.3 q24 Tumor suppressor gene Transcription factor Seq+ 102129 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPST1-TRIM24 TPST1 chr7 66286709 + TRIM24 chr7 138504290 + Exonic hg38 SARC TCGA-KD-A5QS-01A 1 5 Out-of-frame Intra-chr q11.21 q33 Oncogene Tumor suppressor gene 102130 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC22A17-MYH7 SLC22A17 chr14 23352646 - MYH7 chr14 23420234 - Exonic hg38 SARC TCGA-KD-A5QS-01A 1 3 5'UTR-CDS Intra-chr q11.2 q11.2 102131 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF7-RTTN ARHGEF7 chr13 111153991 + RTTN chr18 70150733 - Exonic hg38 SARC TCGA-KD-A5QS-01A 1 1 In-Frame Inter-chr q34 q22.2 102132 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGB1-CCNA1 HMGB1 chr13 30462538 - CCNA1 chr13 36437629 + Exonic hg38 SARC TCGA-KD-A5QS-01A 1000 1000 In-Frame Intra-chr q12.3 q13.3 102133 ChimerSeq TCGA FAWG TCGA_RNA-Seq HS6ST3-FAM155A HS6ST3 chr13 96091569 + FAM155A chr13 107170786 - Exonic hg38 SARC TCGA-KD-A5QT-01A 8 40 Out-of-frame Intra-chr q32.1 q33.3 Seq+ 102134 ChimerSeq TCGA FAWG TCGA_RNA-Seq YPEL1-DIAPH3 YPEL1 chr22 21735615 - DIAPH3 chr13 59666846 - Exonic hg38 SARC TCGA-KD-A5QT-01A 6 4 5'UTR-CDS Inter-chr q11.22 q21.2 Seq+ 102135 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP44-ZSWIM7 ARHGAP44 chr17 12929046 + ZSWIM7 chr17 15981144 - Exonic hg38 SARC TCGA-KD-A5QT-01A 1000 1000 In-Frame Intra-chr p12 p12 Seq+ 102136 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53-DUS3L TP53 chr17 7687377 - DUS3L chr19 5788398 - Exonic hg38 SARC TCGA-KD-A5QU-01A 7 56 5'UTR-CDS Inter-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.3 Seq+ 102137 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAST2-NASP MAST2 chr1 45829581 + NASP chr1 45613169 + Exonic hg38 SARC TCGA-KD-A5QU-01A 2 20 Out-of-frame Intra-chr p34.1 AGC:MAST p34.1 Seq+ 102138 ChimerSeq TCGA FAWG TCGA_RNA-Seq DACH1-TNFSF11 DACH1 chr13 71630556 - TNFSF11 chr13 42606497 + Exonic hg38 SARC TCGA-KD-A5QU-01A 1 13 In-Frame Intra-chr q21.33 Tumor suppressor gene Transcription factor q14.11 Seq+ 102139 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE4D-NOA1 PDE4D chr5 59180595 - NOA1 chr4 56974022 - Exonic hg38 SARC TCGA-KD-A5QU-01A 1 8 In-Frame Inter-chr q12.1 q12 102140 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD21-TPM2 RAD21 chr8 116850618 - TPM2 chr9 35685551 - Exonic hg38 SARC TCGA-KD-A5QU-01A 1 1 Out-of-frame Inter-chr q24.11 p13.3 102141 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIMM8A-CAST TIMM8A chrX 101348533 - CAST chr5 96675539 + Exonic hg38 SARC TCGA-KD-A5QU-01A 1 1 In-Frame Inter-chr q22.1 q15 102142 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMCO3-ATP11A TMCO3 chr13 113539507 + ATP11A chr13 112717322 + Exonic hg38 SARC TCGA-KF-A41W-01A 80 570 5'UTR-CDS Intra-chr q34 q34 Seq+ 102143 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUL4A-F7 CUL4A chr13 113239551 + F7 chr13 113117473 + Exonic hg38 SARC TCGA-KF-A41W-01A 7 31 In-Frame Intra-chr q34 q34 Seq+ 102144 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A14-IL4I1 SLC39A14 chr8 22367408 + IL4I1 chr19 49896053 - Exonic hg38 SARC TCGA-KF-A41W-01A 2 13 5'UTR-CDS Inter-chr p21.3 q13.33 Seq+ 102145 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMP1-F7 LAMP1 chr13 113297495 + F7 chr13 113113847 + Exonic hg38 SARC TCGA-KF-A41W-01A 1 14 In-Frame Intra-chr q34 Oncogene q34 102146 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSHZ1-RNASEH2B TSHZ1 chr18 75211916 + RNASEH2B chr13 50927407 + Exonic hg38 SARC TCGA-KF-A41W-01A 2 10 In-Frame Inter-chr q22.3 Transcription factor q14.3 Seq+ 102147 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMD11-PROZ SAMD11 chr1 926013 + PROZ chr13 113170413 + Exonic hg38 SARC TCGA-KF-A41W-01A 2 2 In-Frame Inter-chr p36.33 q34 Seq+ 102148 ChimerSeq TCGA FAWG TCGA_RNA-Seq VMP1-BRCA1 VMP1 chr17 59773885 + BRCA1 chr17 43082575 - Exonic hg38 SARC TCGA-KF-A41W-01A 1 6 In-Frame Intra-chr q23.1 q21.31 Oncogene Tumor suppressor gene Seq+ 102149 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCF2L-PCID2 MCF2L chr13 113045361 + PCID2 chr13 113200516 - Exonic hg38 SARC TCGA-KF-A41W-01A 1 5 In-Frame Intra-chr q34 q34 102150 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3C3-CTIF PIK3C3 chr18 41955359 + CTIF chr18 48636614 + Exonic hg38 SARC TCGA-KF-A41W-01A 1 2 CDS-3'UTR Intra-chr q12.3 102151 ChimerSeq TCGA FAWG TCGA_RNA-Seq AUTS2-ACTR1A AUTS2 chr7 69899498 + ACTR1A chr10 102490613 - Exonic hg38 SARC TCGA-LI-A67I-01A 5 13 In-Frame Inter-chr q11.22 q24.32 Seq+ 102152 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF4EBP1-ADAM18 EIF4EBP1 chr8 38030718 + ADAM18 chr8 39706790 + Exonic hg38 SARC TCGA-LI-A67I-01A 2 6 CDS-3'UTR Intra-chr p11.23 Seq+ 102153 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD2-CCRL2 SETD2 chr3 47097955 - CCRL2 chr3 46407389 + Exonic hg38 SARC TCGA-LI-A9QH-01A 58 142 CDS-5'UTR Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Seq+ 102154 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBN1-URI1 FBN1 chr15 48644606 - URI1 chr19 29985223 + Exonic hg38 SARC TCGA-LI-A9QH-01A 34 86 In-Frame Inter-chr q21.1 q12 Seq+ 102155 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF507-FXYD1 ZNF507 chr19 32360618 + FXYD1 chr19 35140076 + Exonic hg38 SARC TCGA-LI-A9QH-01A 6 28 CDS-5'UTR Intra-chr q13.11 Transcription factor q13.12 Seq+ 102156 ChimerSeq TCGA FAWG TCGA_RNA-Seq RB1-DIAPH3 RB1 chr13 48307406 + DIAPH3 chr13 60132989 - Exonic hg38 SARC TCGA-LI-A9QH-01A 7 21 In-Frame Intra-chr q14.2 Oncogene Tumor suppressor gene q21.2 Seq+ 102157 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPN2-PIBF1 EPN2 chr17 19237531 + PIBF1 chr13 72893784 + Exonic hg38 SARC TCGA-LI-A9QH-01A 5 14 5'UTR-5'UTR Inter-chr p11.2 q21.33 Seq+ 102158 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDELC2-TAF1D KDELC2 chr11 108498165 - TAF1D chr11 93742898 - Exonic hg38 SARC TCGA-LI-A9QH-01A 4 17 Out-of-frame Intra-chr q22.3 q21 Seq+ 102159 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX10-AIPL1 DDX10 chr11 108723462 + AIPL1 chr17 6428506 - Exonic hg38 SARC TCGA-LI-A9QH-01A 2 24 In-Frame Inter-chr q22.3 p13.2 Seq+ 102160 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESD-FAM124A ESD chr13 46793397 - FAM124A chr13 51251468 + Exonic hg38 SARC TCGA-LI-A9QH-01A 4 10 5'UTR-CDS Intra-chr q14.2 q14.3 Seq+ 102161 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIF1A-C14orf37 HIF1A chr14 61695839 + C14orf37 chr14 58139414 - Exonic hg38 SARC TCGA-LI-A9QH-01A 4 10 Out-of-frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 Seq+ 102162 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLF12-USP32P1 KLF12 chr13 73943981 - USP32P1 chr17 16791827 + Exonic hg38 SARC TCGA-LI-A9QH-01A 2 10 CDS-5'UTR Inter-chr q22.1 Transcription factor p11.2 Seq+ 102163 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS17-SLC12A1 ADAMTS17 chr15 100330889 - SLC12A1 chr15 48255811 + Exonic hg38 SARC TCGA-LI-A9QH-01A 2 8 In-Frame Intra-chr q26.3 q21.1 Seq+ 102164 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIPIN-ATP8B4 TIPIN chr15 66356639 - ATP8B4 chr15 49934182 - Exonic hg38 SARC TCGA-LI-A9QH-01A 3 3 5'UTR-CDS Intra-chr q22.31 q21.2 Seq+ 102165 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-ACER3 UVRAG chr11 76016980 + ACER3 chr11 77015016 + Exonic hg38 SARC TCGA-LI-A9QH-01A 2 6 In-Frame Intra-chr q13.5 Tumor suppressor gene q13.5 Seq+ 102166 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLASP2-STT3B CLASP2 chr3 33684359 - STT3B chr3 31576396 + Exonic hg38 SARC TCGA-LI-A9QH-01A 1 6 In-Frame Intra-chr p22.3 p23 Seq+ 102167 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS2-C5orf60 ADAMTS2 chr5 179272911 - C5orf60 chr5 179643490 - Exonic hg38 SARC TCGA-LI-A9QH-01A 1 2 CDS-3'UTR Intra-chr q35.3 102168 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDSR-ZNF565 KDSR chr18 63331534 - ZNF565 chr19 36195156 - Exonic hg38 SARC TCGA-LI-A9QH-01A 1000 1000 3'UTR-CDS Inter-chr q21.33 q13.12 Transcription factor 102169 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKIV2L2-MACROD2 SKIV2L2 chr5 55422982 + MACROD2 chr20 15885764 + Exonic hg38 SARC TCGA-MB-A5Y9-01A 4 3 Out-of-frame Inter-chr q11.2 p12.1 Seq+ 102170 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNC1H1-MARCH11 DYNC1H1 chr14 102028141 + 2019_ 3_ 11_ chr5 16091081 - Exonic hg38 SARC TCGA-MB-A5Y9-01A 3 6 Out-of-frame Inter-chr q32.31 p15.1 Seq+ 102171 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPAR6-RNASEH2B LPAR6 chr13 48412421 - RNASEH2B chr13 50927407 + Exonic hg38 SARC TCGA-MB-A5YA-01A 11 51 In-Frame Intra-chr q14.2 q14.3 102172 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNASEH2B-LPAR6 RNASEH2B chr13 50910140 + LPAR6 chr13 48389812 - Exonic hg38 SARC TCGA-MB-A5YA-01A 1 28 CDS-3'UTR Intra-chr q14.3 q14.2 102173 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBR5-PSMB1 UBR5 chr8 102412173 - PSMB1 chr6 170549113 - Exonic hg38 SARC TCGA-MB-A5YA-01A 2 1 In-Frame Inter-chr q22.3 Oncogene 102174 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEO1-ZFAT NEO1 chr15 73136027 + ZFAT chr8 134657737 - Exonic hg38 SARC TCGA-MB-A8JK-01A 9 32 In-Frame Inter-chr q24.1 q24.22 Transcription factor Seq+ 102175 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIX-SEMA3A NFIX chr19 13025552 + SEMA3A chr7 83985477 - Exonic hg38 SARC TCGA-MB-A8JK-01A 3 7 Out-of-frame Inter-chr p13.13 Transcription factor q21.11 Seq+ 102176 ChimerSeq TCGA FAWG TCGA_RNA-Seq OXCT1-OR4F17 OXCT1 chr5 41840451 - OR4F17 chr19 110625 + Exonic hg38 SARC TCGA-MB-A8JK-01A 2 9 CDS-5'UTR Inter-chr p13.1 p13.3 Seq+ 102177 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKN1-DDX39A PKN1 chr19 14452023 + DDX39A chr19 14413224 - Exonic hg38 SARC TCGA-MB-A8JK-01A 1 10 CDS-5'UTR Intra-chr p13.12 AGC:PKN p13.12 102178 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRTAP-EOMES CRTAP chr3 33134265 + EOMES chr3 27720325 - Exonic hg38 SARC TCGA-MB-A8JK-01A 1 8 Out-of-frame Intra-chr p22.3 p24.1 Transcription factor 102179 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRIG3-ATP23 LRIG3 chr12 58913982 - ATP23 chr12 57945628 + Exonic hg38 SARC TCGA-MB-A8JL-01A 61 220 CDS-5'UTR Intra-chr q14.1 Tumor suppressor gene 102180 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBMS1-SLC20A1 RBMS1 chr2 160493289 - SLC20A1 chr2 112662864 + Exonic hg38 SARC TCGA-MB-A8JL-01A 4 54 In-Frame Intra-chr q24.2 q14.1 Seq+ 102181 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGA-STRC MGA chr15 41621298 + STRC chr15 43605399 - Exonic hg38 SARC TCGA-MB-A8JL-01A 5 15 5'UTR-CDS Intra-chr q15.1 Transcription factor q15.3 102182 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPM1H-PDZRN4 PPM1H chr12 62693936 - PDZRN4 chr12 41506456 + Exonic hg38 SARC TCGA-MB-A8JL-01A 3 15 In-Frame Intra-chr q14.2 q12 Seq+ 102183 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBMS1-NT5DC4 RBMS1 chr2 160493289 - NT5DC4 chr2 112721818 + Exonic hg38 SARC TCGA-MB-A8JL-01A 3 7 Out-of-frame Intra-chr q24.2 q14.1 Seq+ 102184 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAL-TERB2 ADAL chr15 43345980 + TERB2 chr15 44956896 + Exonic hg38 SARC TCGA-MB-A8JL-01A 1 11 Out-of-frame Intra-chr q15.3 q21.1 102185 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIEZO1-KLHDC4 PIEZO1 chr16 88749384 - KLHDC4 chr16 87714573 - Exonic hg38 SARC TCGA-MB-A8JL-01A 1 11 Out-of-frame Intra-chr q24.3 q24.2 102186 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHF-MYO18A SHF chr15 45171883 - MYO18A chr17 29167021 - Exonic hg38 SARC TCGA-MB-A8JL-01A 1 2 CDS-5'UTR Inter-chr q21.1 q11.2 Oncogene 102187 ChimerSeq TCGA FAWG TCGA_RNA-Seq CILP-IGF2 CILP chr15 65199062 - IGF2 chr11 2139029 - Exonic hg38 SARC TCGA-MB-A8JL-01A 1000 1000 Out-of-frame Inter-chr q22.31 p15.5 Oncogene 102188 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH2-EPB41L3 CDH2 chr18 28147673 - EPB41L3 chr18 5489194 - Exonic hg38 SARC TCGA-MJ-A68H-01A 13 59 CDS-5'UTR Intra-chr q12.1 Oncogene p11.31 Tumor suppressor gene Seq+ 102189 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIF3A-DNMT1 HIF3A chr19 46334986 + DNMT1 chr19 10166685 - Exonic hg38 SARC TCGA-MJ-A68H-01A 7 10 Out-of-frame Intra-chr q13.32 Transcription factor p13.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 102190 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF846-UNC13A ZNF846 chr19 9785926 - UNC13A chr19 17610099 - Exonic hg38 SARC TCGA-MJ-A68H-01A 1 20 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.11 102191 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS5-SLC27A5 RPS5 chr19 58388245 + SLC27A5 chr19 58501410 - Exonic hg38 SARC TCGA-MJ-A68H-01A 1 15 3'UTR-CDS Intra-chr q13.43 q13.43 102192 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIN3B-C19orf57 SIN3B chr19 16841968 + C19orf57 chr19 13886055 - Exonic hg38 SARC TCGA-MJ-A68H-01A 2 5 In-Frame Intra-chr p13.11 p13.12 Seq+ 102193 ChimerSeq TCGA FAWG TCGA_RNA-Seq SS18-SSX1 SS18 chr18 26032399 - SSX1 chrX 48263782 + Exonic hg38 SARC TCGA-MJ-A850-01A 115 434 In-Frame Inter-chr q11.2 p11.23 Oncogene KB Pub Seq+ 102194 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2R2-ATP5O UBE2R2 chr9 33817934 + ATP5O chr21 33904021 - Exonic hg38 SARC TCGA-MO-A47P-01A 2 1 Out-of-frame Inter-chr p13.3 q22.11 102195 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF71-SNX4 ZNF71 chr19 56601591 + SNX4 chr3 125469519 - Exonic hg38 SARC TCGA-MO-A47P-01A 2 1 Out-of-frame Inter-chr q13.43 Transcription factor q21.2 102196 ChimerSeq TCGA FAWG TCGA_RNA-Seq HELZ-OAZ1 HELZ chr17 67203319 - OAZ1 chr19 2272735 + Exonic hg38 SARC TCGA-N1-A6IA-01A 7 65 Out-of-frame Inter-chr q24.2 p13.3 Seq+ 102197 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNPO1-ZNF366 TNPO1 chr5 72861914 + ZNF366 chr5 72461510 - Exonic hg38 SARC TCGA-N1-A6IA-01A 10 32 CDS-5'UTR Intra-chr q13.2 q13.2 Tumor suppressor gene Transcription factor Seq+ 102198 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARMC7-TRIM80P ARMC7 chr17 75110606 + TRIM80P chr17 75074604 + Exonic hg38 SARC TCGA-N1-A6IA-01A 5 7 Out-of-frame Intra-chr q25.1 q25.1 102199 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPATCH8-METTL16 GPATCH8 chr17 44435065 - METTL16 chr17 2477885 - Exonic hg38 SARC TCGA-N1-A6IA-01A 3 12 Out-of-frame Intra-chr q21.31 p13.3 Seq+ 102200 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGAT4B-RNF130 MGAT4B chr5 179798165 - RNF130 chr5 179920426 - Exonic hg38 SARC TCGA-N1-A6IA-01A 2 7 5'UTR-3'UTR Intra-chr q35.3 Seq+ 102201 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL1-HNRNPF KLHL1 chr13 69796738 - HNRNPF chr10 43396590 - Exonic hg38 SARC TCGA-PC-A5DK-01A 2 8 CDS-5'UTR Inter-chr q21.33 q11.21 Seq+ 102202 ChimerSeq TCGA FAWG TCGA_RNA-Seq FLNA-COL6A1 FLNA chrX 154359484 - COL6A1 chr21 45994167 + Exonic hg38 SARC TCGA-PC-A5DK-01A 1 6 Out-of-frame Inter-chr q28 Tumor suppressor gene q22.3 102203 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1D-ASIC2 MYO1D chr17 32876778 - ASIC2 chr17 33028392 - Exonic hg38 SARC TCGA-PC-A5DL-01A 1 6 Out-of-frame Intra-chr q11.2 q12 102204 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP22-EPN2 USP22 chr17 21028542 - EPN2 chr17 19309885 + Exonic hg38 SARC TCGA-PC-A5DL-01A 1 4 In-Frame Intra-chr p11.2 p11.2 102205 ChimerSeq TCGA FAWG TCGA_RNA-Seq FSTL1-CPOX FSTL1 chr3 120409532 - CPOX chr3 98585659 - Exonic hg38 SARC TCGA-PC-A5DM-01A 7 28 Out-of-frame Intra-chr q13.33 q11.2 Seq+ 102206 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDR2L-PRKAR1A CDR2L chr17 75002228 + PRKAR1A chr17 68551084 + Exonic hg38 SARC TCGA-PC-A5DM-01A 2 27 Out-of-frame Intra-chr q25.1 q24.2 Oncogene Tumor suppressor gene 102207 ChimerSeq TCGA FAWG TCGA_RNA-Seq STXBP5-TNFRSF19 STXBP5 chr6 147339384 + TNFRSF19 chr13 23673372 + Exonic hg38 SARC TCGA-PC-A5DM-01A 2 14 Out-of-frame Inter-chr q24.3 q12.12 Seq+ 102208 ChimerSeq TCGA FAWG TCGA_RNA-Seq SACS-MYO16 SACS chr13 23411220 - MYO16 chr13 109179542 + Exonic hg38 SARC TCGA-PC-A5DM-01A 2 6 Out-of-frame Intra-chr q12.12 Seq+ 102209 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D16-PGS1 TBC1D16 chr17 80010160 - PGS1 chr17 78414952 + Exonic hg38 SARC TCGA-PC-A5DM-01A 1 8 CDS-5'UTR Intra-chr q25.3 q25.3 102210 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC7A1-FOXO1 SLC7A1 chr13 29553761 - FOXO1 chr13 40560860 - Exonic hg38 SARC TCGA-PC-A5DM-01A 2 3 5'UTR-CDS Intra-chr q12.3 q14.11 Oncogene Tumor suppressor gene Transcription factor 102211 ChimerSeq TCGA FAWG TCGA_RNA-Seq FSTL1-CPO FSTL1 chr3 120409532 - CPO chr3 98585659 - Exonic hg38 SARC TCGA-PC-A5DM-01A 1000 1000 CDS-5'UTR Intra-chr q13.33 q33.3 102212 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS29-HSPB8 VPS29 chr12 110496012 - HSPB8 chr12 119220714 + Exonic hg38 SARC TCGA-PC-A5DN-01A 236 566 3'UTR-3'UTR Intra-chr q24.11 q24.23 Seq+ 102213 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNMB4-GLIPR1L2 KCNMB4 chr12 70367070 + GLIPR1L2 chr12 75422904 + Exonic hg38 SARC TCGA-PC-A5DN-01A 56 245 Out-of-frame Intra-chr q15 q21.2 Seq+ 102214 ChimerSeq TCGA FAWG TCGA_RNA-Seq BEST3-MYRFL BEST3 chr12 69671428 - MYRFL chr12 69855280 + Exonic hg38 SARC TCGA-PC-A5DN-01A 15 53 Out-of-frame Intra-chr q15 q15 Transcription factor 102215 ChimerSeq TCGA FAWG TCGA_RNA-Seq COX6A1-PPP1R12A COX6A1 chr12 120438229 + PPP1R12A chr12 79872938 - Exonic hg38 SARC TCGA-PC-A5DN-01A 8 81 Out-of-frame Intra-chr q24.31 q21.31 Seq+ 102216 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF7IP-FAM83B ATF7IP chr12 14385400 + FAM83B chr6 54939706 + Exonic hg38 SARC TCGA-PC-A5DN-01A 10 53 In-Frame Inter-chr p13.1 p12.1 Seq+ 102217 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSP90B1-MDM2 HSP90B1 chr12 103947430 + MDM2 chr12 68835829 + Exonic hg38 SARC TCGA-PC-A5DN-01A 15 29 In-Frame Intra-chr q23.3 Tumor suppressor gene q15 Oncogene 102218 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO2-NUDT3 ANO2 chr12 5806052 - NUDT3 chr6 34295685 - Exonic hg38 SARC TCGA-PC-A5DN-01A 14 28 In-Frame Inter-chr p13.31 p21.31 Seq+ 102219 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUAK1-C12orf65 NUAK1 chr12 106083864 - C12orf65 chr12 123253647 + Exonic hg38 SARC TCGA-PC-A5DN-01A 3 46 CDS-5'UTR Intra-chr q23.3 Tumor suppressor gene q24.31 Seq+ 102220 ChimerSeq TCGA FAWG TCGA_RNA-Seq YEATS4-PTPRR YEATS4 chr12 69370975 + PTPRR chr12 70662605 - Exonic hg38 SARC TCGA-PC-A5DN-01A 9 13 Out-of-frame Intra-chr q15 q15 102221 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPKAPK5-UNC119B MAPKAPK5 chr12 111888618 + UNC119B chr12 120719920 + Exonic hg38 SARC TCGA-PC-A5DN-01A 5 12 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.31 Seq+ 102222 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2B1-DIABLO EIF2B1 chr12 123620779 - DIABLO chr12 122218258 - Exonic hg38 SARC TCGA-PC-A5DN-01A 3 16 Out-of-frame Intra-chr q24.31 q24.31 Tumor suppressor gene 102223 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM63B-HCG23 TMEM63B chr6 44141098 + HCG23 chr6 32390692 + Exonic hg38 SARC TCGA-PC-A5DN-01A 5 7 CDS-5'UTR Intra-chr p21.1 102224 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2H3-NUAK1 GTF2H3 chr12 123633872 + NUAK1 chr12 106072843 - Exonic hg38 SARC TCGA-PC-A5DN-01A 5 6 Out-of-frame Intra-chr q24.31 q23.3 Tumor suppressor gene Seq+ 102225 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP1-ETV6 LRP1 chr12 57145490 + ETV6 chr12 11884445 + Exonic hg38 SARC TCGA-PC-A5DN-01A 2 13 In-Frame Intra-chr q13.3 p13.2 Tumor suppressor gene Transcription factor 102226 ChimerSeq TCGA FAWG TCGA_RNA-Seq C6orf52-DST C6orf52 chr6 10694494 - DST chr6 56900621 - Exonic hg38 SARC TCGA-PC-A5DN-01A 3 6 5'UTR-CDS Intra-chr p24.2 p12.1 Oncogene Seq+ 102227 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSR1-NTF3 SSR1 chr6 7289868 - NTF3 chr12 5494194 + Exonic hg38 SARC TCGA-PC-A5DN-01A 2 6 In-Frame Inter-chr p24.3 p13.31 Seq+ 102228 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPKAPK5-PAWR MAPKAPK5 chr12 111888618 + PAWR chr12 79613609 - Exonic hg38 SARC TCGA-PC-A5DN-01A 1 8 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q21.2 Tumor suppressor gene 102229 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAT1-APP FAT1 chr4 186706563 - APP chr21 26000182 - Exonic hg38 SARC TCGA-PC-A5DN-01A 1 2 In-Frame Inter-chr q35.2 Tumor suppressor gene q21.3 102230 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP7B1-EPS15 CYP7B1 chr8 64604682 - EPS15 chr1 51481314 - Exonic hg38 SARC TCGA-PC-A5DO-01A 2 21 In-Frame Inter-chr q12.3 p32.3 Seq+ 102231 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOP2A-TNS4 TOP2A chr17 40389516 - TNS4 chr17 40484609 - Exonic hg38 SARC TCGA-PC-A5DO-01A 1 12 3'UTR-CDS Intra-chr q21.2 q21.2 102232 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA10-PEX11B ITGA10 chr1 145904052 - PEX11B chr1 145912566 - Exonic hg38 SARC TCGA-PC-A5DO-01A 2 4 In-Frame Intra-chr q21.1 Oncogene q21.1 Seq+ 102233 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLRA4-MORF4L2 GLRA4 chrX 103707224 - MORF4L2 chrX 103686685 - Exonic hg38 SARC TCGA-PC-A5DO-01A 1000 1000 Out-of-frame Intra-chr q22.2 q22.2 102234 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF69-RTN4 ZNF69 chr19 11887986 + RTN4 chr2 54987698 - Exonic hg38 SARC TCGA-PC-A5DP-01A 1 1 Out-of-frame Inter-chr p13.2 Transcription factor p16.1 Tumor suppressor gene 102235 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM1-PLAG1 PUM1 chr1 31065616 - PLAG1 chr8 56179513 - Exonic hg38 SARC TCGA-PT-A8TR-01A 18 49 5'UTR-5'UTR Inter-chr p35.2 q12.1 Oncogene Transcription factor Seq+ 102236 ChimerSeq TCGA FAWG TCGA_RNA-Seq XYLT1-EEF2KMT XYLT1 chr16 17470434 - EEF2KMT chr16 5095514 - Exonic hg38 SARC TCGA-QC-A6FX-01A 7 22 5'UTR-CDS Intra-chr p12.3 p13.3 102237 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKFN1-PRR11 ANKFN1 chr17 56499098 + PRR11 chr17 59169748 + Exonic hg38 SARC TCGA-QC-A6FX-01A 8 15 CDS-5'UTR Intra-chr q22 q22 Seq+ 102238 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL18-C6orf118 MRPL18 chr6 159791126 + C6orf118 chr6 165290067 - Exonic hg38 SARC TCGA-QC-A6FX-01A 4 20 Out-of-frame Intra-chr q25.3 q27 Seq+ 102239 ChimerSeq TCGA FAWG TCGA_RNA-Seq STXBP5-SASH1 STXBP5 chr6 147239270 + SASH1 chr6 148468545 + Exonic hg38 SARC TCGA-QC-A6FX-01A 7 6 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene Seq+ 102240 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTRH2-ANKFN1 PTRH2 chr17 59707371 - ANKFN1 chr17 56227917 + Exonic hg38 SARC TCGA-QC-A6FX-01A 6 2 5'UTR-5'UTR Intra-chr q23.1 q22 Seq+ 102241 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF730-CEP89 ZNF730 chr19 23117176 + CEP89 chr19 32901412 - Exonic hg38 SARC TCGA-QC-A6FX-01A 3 13 Out-of-frame Intra-chr p12 Transcription factor q13.11 Seq+ 102242 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOA-C3orf84 RHOA chr3 49375434 - C3orf84 chr3 49178538 - Exonic hg38 SARC TCGA-QC-A6FX-01A 3 9 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Seq+ 102243 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L2-ADGB EPB41L2 chr6 131063155 - ADGB chr6 146635375 + Exonic hg38 SARC TCGA-QC-A6FX-01A 3 7 5'UTR-CDS Intra-chr q23.2 q24.3 Seq+ 102244 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOA-CCDC71 RHOA chr3 49375434 - CCDC71 chr3 49164260 - Exonic hg38 SARC TCGA-QC-A6FX-01A 2 8 5'UTR-5'UTR Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Seq+ 102245 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT9-LGALS3BP SEPT9 chr17 77402703 + LGALS3BP chr17 78972574 - Exonic hg38 SARC TCGA-QC-A6FX-01A 3 4 Out-of-frame Intra-chr q25.3 Seq+ 102246 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT9-DNAI2 SEPT9 chr17 77402703 + DNAI2 chr17 74289594 + Exonic hg38 SARC TCGA-QC-A6FX-01A 2 6 Out-of-frame Intra-chr q25.1 Seq+ 102247 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX9-SERAC1 SNX9 chr6 157928702 + SERAC1 chr6 158158364 - Exonic hg38 SARC TCGA-QC-A6FX-01A 1 6 CDS-5'UTR Intra-chr q25.3 q25.3 Seq+ 102248 ChimerSeq TCGA FAWG TCGA_RNA-Seq LACTB-RAB8B LACTB chr15 63129650 + RAB8B chr15 63244756 + Exonic hg38 SARC TCGA-QC-A6FX-01A 1 1 Out-of-frame Intra-chr q22.2 q22.2 102249 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDS5B-COL4A1 PDS5B chr13 32586593 + COL4A1 chr13 110242734 - Exonic hg38 SARC TCGA-QC-AA9N-01A 41 74 5'UTR-CDS Intra-chr q13.1 Tumor suppressor gene q34 Seq+ 102250 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARCH8-NCAM2 2019_ 3_ 8_ chr10 45594235 - NCAM2 chr21 21324383 + Exonic hg38 SARC TCGA-QC-AA9N-01A 19 55 Out-of-frame Inter-chr q21.1 Tumor suppressor gene Seq+ 102251 ChimerSeq TCGA FAWG TCGA_RNA-Seq RORA-FSTL1 RORA chr15 60592387 - FSTL1 chr3 120404971 - Exonic hg38 SARC TCGA-QC-AA9N-01A 15 39 Out-of-frame Inter-chr q22.2 Transcription factor q13.33 Seq+ 102252 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRIP1-CSNK1G1 NRIP1 chr21 15043495 - CSNK1G1 chr15 64216713 - Exonic hg38 SARC TCGA-QC-AA9N-01A 5 23 5'UTR-CDS Inter-chr q21.1 q22.31 Seq+ 102253 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53-EFCAB5 TP53 chr17 7687377 - EFCAB5 chr17 29993165 + Exonic hg38 SARC TCGA-QC-AA9N-01A 3 30 5'UTR-5'UTR Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor q11.2 102254 ChimerSeq TCGA FAWG TCGA_RNA-Seq FSTL1-RORA FSTL1 chr3 120409532 - RORA chr15 60531851 - Exonic hg38 SARC TCGA-QC-AA9N-01A 6 5 Out-of-frame Inter-chr q13.33 q22.2 Transcription factor 102255 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIAM1-NCAM2 TIAM1 chr21 31558927 - NCAM2 chr21 21324383 + Exonic hg38 SARC TCGA-QC-AA9N-01A 4 8 5'UTR-CDS Intra-chr q22.11 q21.1 Tumor suppressor gene Seq+ 102256 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCAM2-CBR1 NCAM2 chr21 21374013 + CBR1 chr21 36070092 + Exonic hg38 SARC TCGA-QC-AA9N-01A 4 7 CDS-5'UTR Intra-chr q21.1 Tumor suppressor gene q22.12 102257 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNTN1-TMEM117 CNTN1 chr12 41029219 + TMEM117 chr12 44376595 + Exonic hg38 SARC TCGA-QC-AA9N-01A 1 5 Out-of-frame Intra-chr q12 q12 Seq+ 102258 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK1-LAMP5 ROCK1 chr18 21039472 - LAMP5 chr20 9529642 + Exonic hg38 SARC TCGA-QQ-A5V9-01A 21 40 In-Frame Inter-chr q11.1 AGC:DMPK p12.2 Seq+ 102259 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPAT-OAF NPAT chr11 108222500 - OAF chr11 120225661 + Exonic hg38 SARC TCGA-QQ-A5VA-01A 3 104 Out-of-frame Intra-chr q22.3 q23.3 Seq+ 102260 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANLN-TMEM135 ANLN chr7 36439290 + TMEM135 chr11 87157341 + Exonic hg38 SARC TCGA-QQ-A5VA-01A 11 34 In-Frame Inter-chr p14.2 q14.2 Seq+ 102261 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB24-STK32C ZBTB24 chr6 109476175 - STK32C chr10 132245955 - Exonic hg38 SARC TCGA-QQ-A5VA-01A 9 36 In-Frame Inter-chr q21 Transcription factor q26.3 Seq+ 102262 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMPX-PDHA1 SMPX chrX 21743750 - PDHA1 chrX 19349312 + Exonic hg38 SARC TCGA-QQ-A5VA-01A 11 26 In-Frame Intra-chr p22.12 p22.12 Seq+ 102263 ChimerSeq TCGA FAWG TCGA_RNA-Seq MELTF-DLEU2 MELTF chr3 197003901 - DLEU2 chr13 49997419 - Exonic hg38 SARC TCGA-QQ-A5VA-01A 10 17 CDS-3'UTR Inter-chr q29 q14.2 Tumor suppressor gene 102264 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF12-CEP164 ARHGEF12 chr11 120337275 + CEP164 chr11 117338566 + Exonic hg38 SARC TCGA-QQ-A5VA-01A 5 35 CDS-5'UTR Intra-chr q23.3 Tumor suppressor gene q23.3 Seq+ 102265 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAFF-OSBP2 MAFF chr22 38202212 + OSBP2 chr22 30870429 + Exonic hg38 SARC TCGA-QQ-A5VA-01A 9 16 5'UTR-5'UTR Intra-chr q13.1 Transcription factor q12.2 Seq+ 102266 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO6-EDA ANO6 chr12 45403536 + EDA chrX 69860857 + Exonic hg38 SARC TCGA-QQ-A5VA-01A 3 23 Out-of-frame Inter-chr q12 q13.1 Seq+ 102267 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPECC1L-TM6SF1 SPECC1L chr22 24369320 + TM6SF1 chr15 83127358 + Exonic hg38 SARC TCGA-QQ-A5VA-01A 3 23 In-Frame Inter-chr q11.23 q25.2 Seq+ 102268 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAMP2-CHRNA9 SCAMP2 chr15 74845473 - CHRNA9 chr4 40348882 + Exonic hg38 SARC TCGA-QQ-A5VA-01A 3 16 Out-of-frame Inter-chr q24.1 p14 Seq+ 102269 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFC3H1-TSPAN8 ZFC3H1 chr12 71619315 - TSPAN8 chr12 71282819 - Exonic hg38 SARC TCGA-QQ-A5VA-01A 2 17 CDS-5'UTR Intra-chr q21.1 q21.1 Seq+ 102270 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANLN-DGKB ANLN chr7 36396419 + DGKB chr7 14478225 - Exonic hg38 SARC TCGA-QQ-A5VA-01A 1 20 Out-of-frame Intra-chr p14.2 p21.2 Seq+ 102271 ChimerSeq TCGA FAWG TCGA_RNA-Seq XKR6-DLGAP2 XKR6 chr8 11200576 - DLGAP2 chr8 907912 + Exonic hg38 SARC TCGA-QQ-A5VA-01A 1 16 3'UTR-3'UTR Intra-chr p23.1 p23.3 102272 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKAP2-CEP126 SKAP2 chr7 26844030 - CEP126 chr11 101944265 + Exonic hg38 SARC TCGA-QQ-A5VA-01A 2 10 Out-of-frame Inter-chr p15.2 q22.1 102273 ChimerSeq TCGA FAWG TCGA_RNA-Seq BLMH-ABCA9 BLMH chr17 30285388 - ABCA9 chr17 68996014 - Exonic hg38 SARC TCGA-QQ-A5VA-01A 2 3 In-Frame Intra-chr q11.2 q24.2 Seq+ 102274 ChimerSeq TCGA FAWG TCGA_RNA-Seq ISPD-ANKMY2 ISPD chr7 16216066 - ANKMY2 chr7 16636455 - Exonic hg38 SARC TCGA-QQ-A5VA-01A 1 2 Out-of-frame Intra-chr p21.2 p21.1 102275 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED26-PLCB1 MED26 chr19 16627872 - PLCB1 chr20 8628294 + Exonic hg38 SARC TCGA-QQ-A5VB-01A 14 34 In-Frame Inter-chr p13.11 p12.3 Seq+ 102276 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERC1-MRPS9 ERC1 chr12 1371977 + MRPS9 chr2 105099670 + Exonic hg38 SARC TCGA-QQ-A5VC-01A 25 190 Out-of-frame Inter-chr q12.1 Seq+ 102277 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEK7-SMYD3 NEK7 chr1 198232637 + SMYD3 chr1 245929937 - Exonic hg38 SARC TCGA-QQ-A5VC-01A 7 26 In-Frame Intra-chr q31.3 Other:NEK q44 Transcription factor Seq+ 102278 ChimerSeq TCGA FAWG TCGA_RNA-Seq EP400-NOC4L EP400 chr12 131961954 + NOC4L chr12 132150981 + Exonic hg38 SARC TCGA-QQ-A5VC-01A 2 4 Out-of-frame Intra-chr q24.33 Oncogene q24.33 Seq+ 102279 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM3-KCNV2 PUM3 chr9 2828675 - KCNV2 chr9 2729446 + Exonic hg38 SARC TCGA-QQ-A5VC-01A 1 8 Out-of-frame Intra-chr p24.2 p24.2 102280 ChimerSeq TCGA FAWG TCGA_RNA-Seq NARS2-RSF1 NARS2 chr11 78528842 - RSF1 chr11 77667491 - Exonic hg38 SARC TCGA-QQ-A5VC-01A 1 6 Out-of-frame Intra-chr q14.1 q14.1 102281 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZEB1-MSRB2 ZEB1 chr10 31319292 + MSRB2 chr10 23110242 + Exonic hg38 SARC TCGA-QQ-A5VC-01A 2 2 Out-of-frame Intra-chr p11.22 Transcription factor p12.2 Seq+ 102282 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT2-TBC1D30 CNOT2 chr12 70243480 + TBC1D30 chr12 64843380 + Exonic hg38 SARC TCGA-QQ-A8VB-01A 5 4 5'UTR-CDS Intra-chr q15 q14.3 Seq+ 102283 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHC1-COL1A2 SHC1 chr1 154963329 - COL1A2 chr7 94413690 + Exonic hg38 SARC TCGA-QQ-A8VD-01A 1 3 3'UTR-CDS Inter-chr q21.3 q21.3 102284 ChimerSeq TCGA FAWG TCGA_RNA-Seq HTRA1-COL1A1 HTRA1 chr10 122514489 + COL1A1 chr17 50197997 - Exonic hg38 SARC TCGA-QQ-A8VD-01A 1000 1000 Out-of-frame Inter-chr q26.13 Tumor suppressor gene q21.33 Oncogene 102285 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R37-ZNF383 PPP1R37 chr19 45093527 + ZNF383 chr19 37230409 + Exonic hg38 SARC TCGA-QQ-A8VF-01A 10 50 CDS-5'UTR Intra-chr q13.32 q13.12 Transcription factor Seq+ 102286 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF223-AP2A1 ZNF223 chr19 44055191 + AP2A1 chr19 49795630 + Exonic hg38 SARC TCGA-QQ-A8VF-01A 7 19 In-Frame Intra-chr q13.31 Transcription factor q13.33 Seq+ 102287 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLIP1-RSRC2 CLIP1 chr12 122340753 - RSRC2 chr12 122508447 - Exonic hg38 SARC TCGA-QQ-A8VF-01A 4 15 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 102288 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIPE-CALM3 LIPE chr19 42412365 - CALM3 chr19 46605827 + Exonic hg38 SARC TCGA-QQ-A8VF-01A 3 2 CDS-5'UTR Intra-chr q13.2 q13.32 102289 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF383-CEBPG ZNF383 chr19 37218274 + CEBPG chr19 33379144 + Exonic hg38 SARC TCGA-QQ-A8VF-01A 1 9 5'UTR-5'UTR Intra-chr q13.12 Transcription factor q13.11 Transcription factor Seq+ 102290 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUVBL2-CLASRP RUVBL2 chr19 48993902 + CLASRP chr19 45056450 + Exonic hg38 SARC TCGA-QQ-A8VF-01A 2 4 5'UTR-5'UTR Intra-chr q13.33 q13.32 102291 ChimerSeq TCGA FAWG TCGA_RNA-Seq UACA-ISLR2 UACA chr15 70660151 - ISLR2 chr15 74131207 + Exonic hg38 SARC TCGA-QQ-A8VF-01A 1 3 CDS-5'UTR Intra-chr q23 q24.1 102292 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEG3-SIVA1 MEG3 chr14 100831534 + SIVA1 chr14 104766790 + Exonic hg38 SARC TCGA-QQ-A8VH-01A 2 463 5'UTR-3'UTR Intra-chr q32.2 Tumor suppressor gene q32.33 102293 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP1B1-DCAF6 ATP1B1 chr1 169111498 + DCAF6 chr1 167951800 + Exonic hg38 SARC TCGA-QQ-A8VH-01A 5 2 In-Frame Intra-chr q24.2 q24.2 102294 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC40-PRKG1 CCDC40 chr17 80038186 + PRKG1 chr10 52288726 + Exonic hg38 SARC TCGA-QQ-A8VH-01A 1 8 Out-of-frame Inter-chr q25.3 q11.23 Seq+ 102295 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUX1-POP7 CUX1 chr7 102158608 + POP7 chr7 100706821 + Exonic hg38 SARC TCGA-RN-AAAQ-01A 26 132 CDS-5'UTR Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 Seq+ 102296 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE3C-TYW1B UBE3C chr7 157187019 + TYW1B chr7 72694824 - Exonic hg38 SARC TCGA-RN-AAAQ-01A 12 15 Out-of-frame Intra-chr q36.3 q11.23 102297 ChimerSeq TCGA FAWG TCGA_RNA-Seq EML1-GPI EML1 chr14 99793543 + GPI chr19 34393728 + Exonic hg38 SARC TCGA-RN-AAAQ-01A 3 12 In-Frame Inter-chr q32.2 Seq+ 102298 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFE2L3-POU6F2 NFE2L3 chr7 26178122 + POU6F2 chr7 39339642 + Exonic hg38 SARC TCGA-RN-AAAQ-01A 1 8 Out-of-frame Intra-chr p15.2 Transcription factor p14.1 Tumor suppressor gene Transcription factor 102299 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL26-GATAD2A KLHL26 chr19 18637137 + GATAD2A chr19 19492306 + Exonic hg38 SARC TCGA-SG-A6Z4-01A 2 8 In-Frame Intra-chr p13.11 p13.11 Transcription factor 102300 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM214A-CCDC102B FAM214A chr15 52593578 - CCDC102B chr18 69054030 + Exonic hg38 SARC TCGA-SG-A6Z4-01A 3 2 In-Frame Inter-chr q21.3 q22.1 102301 ChimerSeq TCGA FAWG TCGA_RNA-Seq NARS2-TENM4 NARS2 chr11 78559539 - TENM4 chr11 78771138 - Exonic hg38 SARC TCGA-SG-A6Z4-01A 1 1 Out-of-frame Intra-chr q14.1 q14.1 102302 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB21-DNM3 RAB21 chr12 71755288 + DNM3 chr1 172081832 + Exonic hg38 SARC TCGA-SG-A6Z7-01A 54 532 In-Frame Inter-chr q21.1 q24.3 Seq+ 102303 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYT1-EPYC SYT1 chr12 79047362 + EPYC chr12 91002578 - Exonic hg38 SARC TCGA-SG-A6Z7-01A 78 278 5'UTR-5'UTR Intra-chr q21.2 q21.33 Seq+ 102304 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNMB4-ARHGAP9 KCNMB4 chr12 70367070 + ARHGAP9 chr12 57477269 - Exonic hg38 SARC TCGA-SG-A6Z7-01A 90 167 In-Frame Intra-chr q15 q13.3 Seq+ 102305 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC16A7-SYT1 SLC16A7 chr12 59596236 + SYT1 chr12 79047297 + Exonic hg38 SARC TCGA-SG-A6Z7-01A 20 116 5'UTR-5'UTR Intra-chr q14.1 q21.2 Seq+ 102306 ChimerSeq TCGA FAWG TCGA_RNA-Seq YY1AP1-ARHGEF2 YY1AP1 chr1 155668627 - ARHGEF2 chr1 155983200 - Exonic hg38 SARC TCGA-SG-A6Z7-01A 17 76 CDS-5'UTR Intra-chr q22 q22 Seq+ 102307 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB21-SLC4A8 RAB21 chr12 71774022 + SLC4A8 chr12 51469614 + Exonic hg38 SARC TCGA-SG-A6Z7-01A 12 43 Out-of-frame Intra-chr q21.1 q13.13 Seq+ 102308 ChimerSeq TCGA FAWG TCGA_RNA-Seq LINC-MDM2 LINC chr7 131107720 - MDM2 chr12 68824363 + Exonic hg38 SARC TCGA-SG-A6Z7-01A 10 31 Out-of-frame Inter-chr q15 Oncogene 102309 ChimerSeq TCGA FAWG TCGA_RNA-Seq LGR5-FAM19A2 LGR5 chr12 71535186 + FAM19A2 chr12 61867426 - Exonic hg38 SARC TCGA-SG-A6Z7-01A 11 26 Out-of-frame Intra-chr q21.1 q14.1 Seq+ 102310 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSFM-LRRIQ1 TSFM chr12 57787162 + LRRIQ1 chr12 85124070 + Exonic hg38 SARC TCGA-SG-A6Z7-01A 5 28 Out-of-frame Intra-chr q14.1 q21.31 Seq+ 102311 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF251-CHMP4C ZNF251 chr8 144753683 - CHMP4C chr8 81753064 + Exonic hg38 SARC TCGA-SG-A6Z7-01A 5 18 5'UTR-CDS Intra-chr Transcription factor q21.13 Seq+ 102312 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSFM-METTL11B TSFM chr12 57787162 + METTL11B chr1 170157969 + Exonic hg38 SARC TCGA-SG-A6Z7-01A 2 18 Out-of-frame Inter-chr q14.1 q24.2 Seq+ 102313 ChimerSeq TCGA FAWG TCGA_RNA-Seq RWDD1-CEP85L RWDD1 chr6 116584857 + CEP85L chr6 118523920 - Exonic hg38 SARC TCGA-SG-A6Z7-01A 1 16 In-Frame Intra-chr q22.1 q22.31 Seq+ 102314 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB21-MGAT4C RAB21 chr12 71774022 + MGAT4C chr12 86049723 - Exonic hg38 SARC TCGA-SG-A6Z7-01A 3 5 CDS-5'UTR Intra-chr q21.1 Seq+ 102315 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPM-DNM3 CPM chr12 68932678 - DNM3 chr1 172308728 + Exonic hg38 SARC TCGA-SG-A6Z7-01A 1 12 Out-of-frame Inter-chr q15 q24.3 Seq+ 102316 ChimerSeq TCGA FAWG TCGA_RNA-Seq CERK-CELSR1 CERK chr22 46738007 - CELSR1 chr22 46439411 - Exonic hg38 SARC TCGA-SG-A6Z7-01A 3 1 In-Frame Intra-chr q13.31 q13.31 102317 ChimerSeq TCGA FAWG TCGA_RNA-Seq POC1B-TNR POC1B chr12 89491936 - TNR chr1 175406777 - Exonic hg38 SARC TCGA-SG-A6Z7-01A 1 9 CDS-5'UTR Inter-chr q21.33 q25.1 Seq+ 102318 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXNA4-TRHDE PLXNA4 chr7 132576422 - TRHDE chr12 72286681 + Exonic hg38 SARC TCGA-SG-A6Z7-01A 1 8 5'UTR-CDS Inter-chr q32.3 q21.1 Seq+ 102319 ChimerSeq TCGA FAWG TCGA_RNA-Seq QSOX1-EDARADD QSOX1 chr1 180184050 + EDARADD chr1 236468231 + Exonic hg38 SARC TCGA-SG-A6Z7-01A 1 8 Out-of-frame Intra-chr q25.2 q42.3 102320 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC4A8-MGAT4C SLC4A8 chr12 51471532 + MGAT4C chr12 86049723 - Exonic hg38 SARC TCGA-SG-A6Z7-01A 2 4 CDS-5'UTR Intra-chr q13.13 Seq+ 102321 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM157B-RNMT FAM157B chr9 138231103 + RNMT chr18 13762039 + Exonic hg38 SARC TCGA-SG-A6Z7-01A 1 7 5'UTR-CDS Inter-chr q34.3 p11.21 102322 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM1L-FGD4 DNM1L chr12 32679465 + FGD4 chr12 32624422 + Exonic hg38 SARC TCGA-SG-A6Z7-01A 2 2 Out-of-frame Intra-chr p11.21 p11.21 Seq+ 102323 ChimerSeq TCGA FAWG TCGA_RNA-Seq NKAIN2-DCBLD1 NKAIN2 chr6 123804254 + DCBLD1 chr6 117503767 + Exonic hg38 SARC TCGA-SG-A6Z7-01A 1 2 Out-of-frame Intra-chr q22.31 q22.1 102324 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC16A7-EPYC SLC16A7 chr12 59655208 + EPYC chr12 91002535 - Exonic hg38 SARC TCGA-SG-A6Z7-01A 1000 1000 Out-of-frame Intra-chr q14.1 q21.33 102325 ChimerSeq TCGA FAWG TCGA_RNA-Seq YKT6-EIF3B YKT6 chr7 44201239 + EIF3B chr7 2379394 + Exonic hg38 SARC TCGA-SG-A849-01A 63 174 Out-of-frame Intra-chr p13 p22.3 Seq+ 102326 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBN1-EIF3B FBN1 chr15 48465568 - EIF3B chr7 2375389 + Exonic hg38 SARC TCGA-SG-A849-01A 12 42 Out-of-frame Inter-chr q21.1 p22.3 Seq+ 102327 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF3B-GDI2 EIF3B chr7 2379242 + GDI2 chr10 5786050 - Exonic hg38 SARC TCGA-SG-A849-01A 8 7 In-Frame Inter-chr p22.3 p15.1 102328 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAS7-ATP8B4 GAS7 chr17 10198208 - ATP8B4 chr15 49981294 - Exonic hg38 SARC TCGA-SG-A849-01A 3 6 Out-of-frame Inter-chr p13.1 q21.2 Seq+ 102329 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK7-ADAM32 DOCK7 chr1 62552732 - ADAM32 chr8 39223040 + Exonic hg38 SARC TCGA-SG-A849-01A 1 10 CDS-3'UTR Inter-chr p31.3 Seq+ 102330 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R2A-TM2D2 PPP2R2A chr8 26293740 + TM2D2 chr8 38995794 - Exonic hg38 SARC TCGA-SG-A849-01A 1 6 CDS-5'UTR Intra-chr p21.2 p11.22 102331 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS23-FAM117A MRPS23 chr17 57849240 - FAM117A chr17 49732720 - Exonic hg38 SARC TCGA-SI-A71O-01A 24 27 Out-of-frame Intra-chr q22 q21.33 Seq+ 102332 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL1A2-CPOX COL1A2 chr7 94430220 + CPOX chr3 98580152 - Exonic hg38 SARC TCGA-SI-A71O-01A 23 0 Out-of-frame Inter-chr q21.3 q11.2 102333 ChimerSeq TCGA FAWG TCGA_RNA-Seq NTM-CTNNA2 NTM chr11 132212147 + CTNNA2 chr2 79858013 + Exonic hg38 SARC TCGA-SI-A71O-01A 8 26 In-Frame Inter-chr q25 p12 Tumor suppressor gene Seq+ 102334 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT7-F10 KAT7 chr17 49798558 + F10 chr13 113138457 + Exonic hg38 SARC TCGA-SI-A71O-01A 7 21 Out-of-frame Inter-chr q21.33 Transcription factor q34 Seq+ 102335 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALY-ATRN RALY chr20 34031604 + ATRN chr20 3535253 + Exonic hg38 SARC TCGA-SI-A71O-01A 5 14 5'UTR-CDS Intra-chr q11.22 p13 Seq+ 102336 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM2A-SLC5A4 KDM2A chr11 67180217 + SLC5A4 chr22 32254213 - Exonic hg38 SARC TCGA-SI-A71O-01A 3 5 Out-of-frame Inter-chr q13.2 Transcription factor q12.3 Seq+ 102337 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDHC-F10 SDHC chr1 161328497 + F10 chr13 113129452 + Exonic hg38 SARC TCGA-SI-A71O-01A 3 3 Out-of-frame Inter-chr q23.3 Oncogene q34 102338 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL1A2-POSTN COL1A2 chr7 94399084 + POSTN chr13 37587986 - Exonic hg38 SARC TCGA-SI-A71O-01A 1 8 In-Frame Inter-chr q21.3 q13.3 102339 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF3-SYT4 PHF3 chr6 63646795 + SYT4 chr18 43274394 - Exonic hg38 SARC TCGA-SI-A71O-01A 1 8 In-Frame Inter-chr q12 q12.3 Seq+ 102340 ChimerSeq TCGA FAWG TCGA_RNA-Seq YLPM1-KHDRBS2 YLPM1 chr14 74824307 + KHDRBS2 chr6 61732764 - Exonic hg38 SARC TCGA-SI-A71O-01A 1 6 Out-of-frame Inter-chr q24.3 q11.1 102341 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A4-APBB1IP SLC39A4 chr8 144412563 - APBB1IP chr10 26492327 + Exonic hg38 SARC TCGA-SI-A71O-01A 1 3 5'UTR-5'UTR Inter-chr q24.3 Tumor suppressor gene p12.1 102342 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2D1-MFSD11 UBE2D1 chr10 58335225 + MFSD11 chr17 76774997 + Exonic hg38 SARC TCGA-SI-A71O-01A 1 2 Out-of-frame Inter-chr q21.1 q25.1 Seq+ 102343 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYH10-CDKN2A MYH10 chr17 8622902 - CDKN2A chr9 21971208 - Exonic hg38 SARC TCGA-SI-A71P-01A 133 231 In-Frame Inter-chr p13.1 p21.3 Oncogene Tumor suppressor gene Seq+ 102344 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKN2A-MYH10 CDKN2A chr9 21994139 - MYH10 chr17 8604982 - Exonic hg38 SARC TCGA-SI-A71P-01A 3 11 Out-of-frame Inter-chr p21.3 Oncogene Tumor suppressor gene p13.1 Seq+ 102345 ChimerSeq TCGA FAWG TCGA_RNA-Seq IQCE-TIMP2 IQCE chr7 2590106 + TIMP2 chr17 78857646 - Exonic hg38 SARC TCGA-SI-A71P-01A 1 4 Out-of-frame Inter-chr p22.3 q25.3 102346 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMB1-HBP1 LAMB1 chr7 107961206 - HBP1 chr7 107179879 + Exonic hg38 SARC TCGA-SI-A71Q-01A 62 186 CDS-3'UTR Intra-chr q31.1 Tumor suppressor gene Transcription factor Seq+ 102347 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL30-PPHLN1 RPL30 chr8 98044943 - PPHLN1 chr12 42374863 + Exonic hg38 SARC TCGA-SI-A71Q-01A 10 181 In-Frame Inter-chr q22.2 q12 102348 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPM-DMD HNRNPM chr19 8465515 + DMD chrX 31968514 - Exonic hg38 SARC TCGA-SI-A71Q-01A 22 56 In-Frame Inter-chr p13.2 p21.1 Tumor suppressor gene Seq+ 102349 ChimerSeq TCGA FAWG TCGA_RNA-Seq LONP1-FZR1 LONP1 chr19 5694650 - FZR1 chr19 3535150 + Exonic hg38 SARC TCGA-SI-A71Q-01A 7 60 Out-of-frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Seq+ 102350 ChimerSeq TCGA FAWG TCGA_RNA-Seq C19orf24-CREB3L3 C19orf24 chr19 1277299 + CREB3L3 chr19 4168351 + Exonic hg38 SARC TCGA-SI-A71Q-01A 7 27 Out-of-frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 102351 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP31-CFAP100 ARHGAP31 chr3 119295004 + CFAP100 chr3 126407172 + Exonic hg38 SARC TCGA-SI-A71Q-01A 6 24 In-Frame Intra-chr q13.32 q21.3 102352 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERC1-TEKT4P2 ERC1 chr12 1083580 + TEKT4P2 chr21 9127547 - Exonic hg38 SARC TCGA-SI-A71Q-01A 5 18 CDS-3'UTR Inter-chr p11.2 Seq+ 102353 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMIM7-EPS15L1 SMIM7 chr19 16647120 - EPS15L1 chr19 16418104 - Exonic hg38 SARC TCGA-SI-A71Q-01A 4 17 3'UTR-3'UTR Intra-chr p13.11 p13.11 Seq+ 102354 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD83-EHF CD83 chr6 14118065 + EHF chr11 34642628 + Exonic hg38 SARC TCGA-SI-A71Q-01A 5 10 In-Frame Inter-chr p23 p13 Tumor suppressor gene Transcription factor Seq+ 102355 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIB1-MAU2 MIB1 chr18 21705123 + MAU2 chr19 19335718 + Exonic hg38 SARC TCGA-SI-A71Q-01A 1 9 5'UTR-CDS Inter-chr q11.2 p13.11 102356 ChimerSeq TCGA FAWG TCGA_RNA-Seq VCAN-EDIL3 VCAN chr5 83493931 + EDIL3 chr5 83963360 - Exonic hg38 SARC TCGA-SI-A71Q-01A 3 1 Out-of-frame Intra-chr q14.2 q14.3 Seq+ 102357 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF268-LPAR1 ZNF268 chr12 133182030 + LPAR1 chr9 110942168 - Exonic hg38 SARC TCGA-SI-A71Q-01A 2 4 In-Frame Inter-chr q24.33 Transcription factor q31.3 102358 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAT10-METTL15 NAT10 chr11 34123855 + METTL15 chr11 28398788 + Exonic hg38 SARC TCGA-SI-A71Q-01A 2 1 CDS-3'UTR Intra-chr p13 p14.1 102359 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRCC1-SAYSD1 LRRCC1 chr8 85110180 + SAYSD1 chr6 39105776 - Exonic hg38 SARC TCGA-SI-A71Q-01A 1 3 Out-of-frame Inter-chr q21.2 p21.2 102360 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUBCNL-CUBN RUBCNL chr13 46387677 - CUBN chr10 16851443 - Exonic hg38 SARC TCGA-SI-AA8B-01A 21 115 5'UTR-3'UTR Inter-chr q14.13 p13 102361 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRM-AS5 PTPRM chr18 7955414 + AS5 chr18 4293160 + Exonic hg38 SARC TCGA-SI-AA8B-01A 17 38 Out-of-frame Intra-chr p11.23 102362 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK8-GCNT7 CDK8 chr13 26353880 + GCNT7 chr20 56495297 - Exonic hg38 SARC TCGA-SI-AA8B-01A 8 38 Out-of-frame Inter-chr q12.13 CMGC:CDK Oncogene q13.31 Seq+ 102363 ChimerSeq TCGA FAWG TCGA_RNA-Seq RORA-PTPN9 RORA chr15 60592387 - PTPN9 chr15 75506003 - Exonic hg38 SARC TCGA-SI-AA8B-01A 4 9 Out-of-frame Intra-chr q22.2 Transcription factor q24.2 Seq+ 102364 ChimerSeq TCGA FAWG TCGA_RNA-Seq COMMD7-DUSP15 COMMD7 chr20 32743308 - DUSP15 chr20 31869597 - Exonic hg38 SARC TCGA-SI-AA8B-01A 1 20 In-Frame Intra-chr q11.21 q11.21 102365 ChimerSeq TCGA FAWG TCGA_RNA-Seq RB1-RUBCNL RB1 chr13 48381443 + RUBCNL chr13 46344831 - Exonic hg38 SARC TCGA-SI-AA8B-01A 2 15 In-Frame Intra-chr q14.2 Oncogene Tumor suppressor gene q14.13 102366 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1orf21-ANGPTL1 C1orf21 chr1 184477603 + ANGPTL1 chr1 178853787 - Exonic hg38 SARC TCGA-SI-AA8B-01A 3 10 In-Frame Intra-chr q25.3 q25.2 Seq+ 102367 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHACTR3-BCAS1 PHACTR3 chr20 59577617 + BCAS1 chr20 54058723 - Exonic hg38 SARC TCGA-SI-AA8B-01A 3 5 CDS-5'UTR Intra-chr q13.32 q13.2 Seq+ 102368 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAD1L1-RPA3 MAD1L1 chr7 2014502 - RPA3 chr7 7641175 - Exonic hg38 SARC TCGA-SI-AA8B-01A 1 3 CDS-5'UTR Intra-chr p22.3 Tumor suppressor gene p21.3 Seq+ 102369 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR45B-SEPT9 WDR45B chr17 82643949 - SEPT9 chr17 77482144 + Exonic hg38 SARC TCGA-SI-AA8B-01A 1 2 Out-of-frame Intra-chr q25.3 102370 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R2D-RGS10 PPP2R2D chr10 131901330 + RGS10 chr10 119527424 - Exonic hg38 SARC TCGA-SI-AA8C-01A 34 80 In-Frame Intra-chr q26.3 q26.11 102371 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMF1-CHST8 PSMF1 chr20 1125650 + CHST8 chr19 33689176 + Exonic hg38 SARC TCGA-SI-AA8C-01A 19 47 CDS-5'UTR Inter-chr p13 q13.11 Seq+ 102372 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP24-MAPK10 ARHGAP24 chr4 85942273 + MAPK10 chr4 86017370 - Exonic hg38 SARC TCGA-SI-AA8C-01A 3 18 Out-of-frame Intra-chr q21.23 q21.3 Tumor suppressor gene Seq+ 102373 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP5L-SGSM3 LRP5L chr22 25375813 - SGSM3 chr22 40400696 + Exonic hg38 SARC TCGA-SI-AA8C-01A 3 13 5'UTR-5'UTR Intra-chr q11.23 q13.1 Seq+ 102374 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLF12-UCHL3 KLF12 chr13 73943981 - UCHL3 chr13 75560753 + Exonic hg38 SARC TCGA-SI-AA8C-01A 1 6 In-Frame Intra-chr q22.1 Transcription factor q22.2 Seq+ 102375 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITM2C-COL1A2 ITM2C chr2 230875808 + COL1A2 chr7 94414222 + Exonic hg38 SARC TCGA-SI-AA8C-01A 1 2 In-Frame Inter-chr q37.1 q21.3 102376 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNL3L-GABRB3 GNL3L chrX 54532585 + GABRB3 chr15 26583414 - Exonic hg38 SARC TCGA-UE-A6QU-01A 13 85 Out-of-frame Inter-chr p11.22 q12 Seq+ 102377 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBP1-SLC24A3 UBP1 chr3 33409236 - SLC24A3 chr20 19584971 + Exonic hg38 SARC TCGA-VT-A80G-01A 19 57 In-Frame Inter-chr p22.3 Transcription factor p11.23 Seq+ 102378 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP4R1-NUP93 PPP4R1 chr18 9614226 - NUP93 chr16 56823707 + Exonic hg38 SARC TCGA-VT-A80G-01A 9 79 Out-of-frame Inter-chr p11.22 q13 Seq+ 102379 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUPT20H-POSTN SUPT20H chr13 37029765 - POSTN chr13 37564560 - Exonic hg38 SARC TCGA-VT-A80G-01A 12 34 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 102380 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM9B-PSIP1 TMEM9B chr11 8962092 - PSIP1 chr9 15490124 - Exonic hg38 SARC TCGA-VT-A80G-01A 7 51 In-Frame Inter-chr p15.4 p22.3 Oncogene Seq+ 102381 ChimerSeq TCGA FAWG TCGA_RNA-Seq XXYLT1-ETV5 XXYLT1 chr3 195156449 - ETV5 chr3 186066072 - Exonic hg38 SARC TCGA-VT-A80G-01A 7 6 In-Frame Intra-chr q29 q27.2 Oncogene Transcription factor Seq+ 102382 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRAT-NAALADL2 LRAT chr4 154636396 + NAALADL2 chr3 175096790 + Exonic hg38 SARC TCGA-VT-A80G-01A 3 21 5'UTR-CDS Inter-chr q32.1 q26.31 Seq+ 102383 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATRX-SNTB2 ATRX chrX 77697583 - SNTB2 chr16 69270143 + Exonic hg38 SARC TCGA-VT-A80G-01A 5 10 Out-of-frame Inter-chr q21.1 Oncogene Seq+ 102384 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGAV-ARHGAP15 ITGAV chr2 186669814 + ARHGAP15 chr2 143228581 + Exonic hg38 SARC TCGA-VT-A80G-01A 1 18 Out-of-frame Intra-chr q32.1 Tumor suppressor gene q22.2 Seq+ 102385 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNTB2-NUP93 SNTB2 chr16 69270285 + NUP93 chr16 56818664 + Exonic hg38 SARC TCGA-VT-A80G-01A 1 5 Out-of-frame Intra-chr q13 Seq+ 102386 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLIS3-IL17REL GLIS3 chr9 3932360 - IL17REL chr22 50001231 - Exonic hg38 SARC TCGA-VT-A80G-01A 1 4 CDS-5'UTR Inter-chr p24.2 Transcription factor q13.33 Seq+ 102387 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF721-CHL1 ZNF721 chr4 435770 - CHL1 chr3 244613 + Exonic hg38 SARC TCGA-VT-A80G-01A 1 3 3'UTR-5'UTR Inter-chr p16.3 Transcription factor p26.3 102388 ChimerSeq TCGA FAWG TCGA_RNA-Seq PNPLA8-SEM1 PNPLA8 chr7 108526029 - SEM1 chr7 96694891 - Exonic hg38 SARC TCGA-VT-A80J-01A 12 138 5'UTR-5'UTR Intra-chr q31.1 q21.3 102389 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF6-TENM3 ATF6 chr1 161792327 + TENM3 chr4 182600924 + Exonic hg38 SARC TCGA-VT-A80J-01A 12 12 In-Frame Inter-chr q23.3 Transcription factor q34.3 102390 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-BBOX1 PPFIA1 chr11 70356254 + BBOX1 chr11 27115452 + Exonic hg38 SARC TCGA-VT-A80J-01A 7 12 In-Frame Intra-chr q13.3 p14.2 Seq+ 102391 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO5A-NEDD4 MYO5A chr15 52340196 - NEDD4 chr15 55924699 - Exonic hg38 SARC TCGA-VT-A80J-01A 5 14 In-Frame Intra-chr q21.2 q21.3 Tumor suppressor gene Seq+ 102392 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAD3-INTS14 SMAD3 chr15 67066360 + INTS14 chr15 65584888 - Exonic hg38 SARC TCGA-VT-A80J-01A 5 14 Out-of-frame Intra-chr q22.33 Transcription factor q22.31 102393 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNG12-PLXNA2 GNG12 chr1 67833344 - PLXNA2 chr1 208084580 - Exonic hg38 SARC TCGA-VT-A80J-01A 2 5 5'UTR-CDS Intra-chr p31.3 q32.2 Seq+ 102394 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGA-CHP1 MGA chr15 41621298 + CHP1 chr15 41270557 + Exonic hg38 SARC TCGA-VT-A80J-01A 1 6 5'UTR-CDS Intra-chr q15.1 Transcription factor q15.1 102395 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOSPD2-ARHGAP6 MOSPD2 chrX 14873758 + ARHGAP6 chrX 11182118 - Exonic hg38 SARC TCGA-VT-A80J-01A 1 3 In-Frame Intra-chr p22.2 p22.2 Seq+ 102396 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSPB11-CACHD1 HSPB11 chr1 53939985 - CACHD1 chr1 64679595 + Exonic hg38 SARC TCGA-VT-A80J-01A 1 2 Out-of-frame Intra-chr p32.3 p31.3 102397 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL9-C1orf21 BCL9 chr1 147615902 + C1orf21 chr1 184619518 + Exonic hg38 SARC TCGA-VT-AB3D-01A 3 12 In-Frame Intra-chr q21.2 Oncogene q25.3 Seq+ 102398 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMTC3-PRRC2C TMTC3 chr12 88176319 + PRRC2C chr1 171591587 + Exonic hg38 SARC TCGA-WK-A8XO-01A 22 105 Out-of-frame Inter-chr q21.32 q24.3 Seq+ 102399 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP6-AKIRIN2 SENP6 chr6 75678927 + AKIRIN2 chr6 87675607 - Exonic hg38 SARC TCGA-WK-A8XO-01A 15 55 Out-of-frame Intra-chr q14.1 q15 Seq+ 102400 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP290-FGGY CEP290 chr12 88089032 - FGGY chr1 59625988 + Exonic hg38 SARC TCGA-WK-A8XO-01A 8 61 In-Frame Inter-chr q21.32 p32.1 Seq+ 102401 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF418-MYO9B ZNF418 chr19 57927977 - MYO9B chr19 17209586 + Exonic hg38 SARC TCGA-WK-A8XO-01A 4 18 In-Frame Intra-chr q13.43 Transcription factor p13.11 102402 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT2-CEP290 CNOT2 chr12 70278274 + CEP290 chr12 88089487 - Exonic hg38 SARC TCGA-WK-A8XO-01A 3 20 In-Frame Intra-chr q15 q21.32 102403 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3IP-NUCB2 RAB3IP chr12 69739031 + NUCB2 chr11 17282789 + Exonic hg38 SARC TCGA-WK-A8XO-01A 4 13 5'UTR-5'UTR Inter-chr q15 p15.1 Seq+ 102404 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALNT1-EPYC B4GALNT1 chr12 57631915 - EPYC chr12 91002578 - Exonic hg38 SARC TCGA-WK-A8XO-01A 4 9 CDS-5'UTR Intra-chr q13.3 q21.33 Seq+ 102405 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDM2-PTPRR MDM2 chr12 68813628 + PTPRR chr12 70684783 - Exonic hg38 SARC TCGA-WK-A8XO-01A 1 10 Out-of-frame Intra-chr q15 Oncogene q15 Seq+ 102406 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDM2-IL22 MDM2 chr12 68828931 + IL22 chr12 68248876 - Exonic hg38 SARC TCGA-WK-A8XO-01A 1 7 In-Frame Intra-chr q15 Oncogene q15 102407 ChimerSeq TCGA FAWG TCGA_RNA-Seq NTN4-CCT2 NTN4 chr12 95713212 - CCT2 chr12 69597156 + Exonic hg38 SARC TCGA-WK-A8XO-01A 2 1 In-Frame Intra-chr q22 q15 102408 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELK3-NUP107 ELK3 chr12 96247734 + NUP107 chr12 68731110 + Exonic hg38 SARC TCGA-WK-A8XO-01A 1 4 In-Frame Intra-chr q23.1 Transcription factor q15 102409 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2CA-PDLIM4 PPP2CA chr5 134225760 - PDLIM4 chr5 132262609 + Exonic hg38 SARC TCGA-WK-A8XO-01A 1 3 In-Frame Intra-chr q31.1 Tumor suppressor gene q31.1 Tumor suppressor gene 102410 ChimerSeq TCGA FAWG TCGA_RNA-Seq CALCOCO2-WRAP53 CALCOCO2 chr17 48856187 + WRAP53 chr17 7700741 + Exonic hg38 SARC TCGA-WK-A8XS-01A 44 153 In-Frame Intra-chr q21.32 p13.1 Seq+ 102411 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFCAB13-NPEPPS EFCAB13 chr17 47374966 + NPEPPS chr17 47612460 + Exonic hg38 SARC TCGA-WK-A8XS-01A 7 24 In-Frame Intra-chr q21.32 q21.32 102412 ChimerSeq TCGA FAWG TCGA_RNA-Seq COG4-PMFBP1 COG4 chr16 70512239 - PMFBP1 chr16 72154459 - Exonic hg38 SARC TCGA-WK-A8XS-01A 7 14 In-Frame Intra-chr q22.1 q22.2 Seq+ 102413 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX30-SEC16A SNX30 chr9 112804967 + SEC16A chr9 136443900 - Exonic hg38 SARC TCGA-WK-A8XS-01A 4 7 In-Frame Intra-chr q32 q34.3 Seq+ 102414 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRYL1-MLNR CRYL1 chr13 20525754 - MLNR chr13 49222040 + Exonic hg38 SARC TCGA-WK-A8XS-01A 2 12 Out-of-frame Intra-chr q12.11 q14.2 Seq+ 102415 ChimerSeq TCGA FAWG TCGA_RNA-Seq SS18-SSX2 SS18 chr18 26032399 - SSX2 chrX 52700578 - Exonic hg38 SARC TCGA-WK-A8XT-01A 63 114 CDS-5'UTR Inter-chr q11.2 p11.22 KB Pub Seq+ 102416 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPDU1-SPEM1 MPDU1 chr17 7583965 + SPEM1 chr17 7420627 + Exonic hg38 SARC TCGA-WK-A8XX-01A 8 24 CDS-3'UTR Intra-chr p13.1 Seq+ 102417 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF217-ANKRD6 RNF217 chr6 124963426 + ANKRD6 chr6 89629112 + Exonic hg38 SARC TCGA-WK-A8XX-01A 8 21 In-Frame Intra-chr q22.31 q15 Seq+ 102418 ChimerSeq TCGA FAWG TCGA_RNA-Seq JPH2-RNF20 JPH2 chr20 44159618 - RNF20 chr9 101535398 + Exonic hg38 SARC TCGA-WK-A8XX-01A 3 10 CDS-5'UTR Inter-chr q13.12 q31.1 102419 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPARA-NFIC PPARA chr22 46151970 + NFIC chr19 3456550 + Exonic hg38 SARC TCGA-WK-A8XX-01A 3 7 5'UTR-CDS Inter-chr q13.31 Tumor suppressor gene Transcription factor p13.3 Transcription factor Seq+ 102420 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP58-SPATA13 NUP58 chr13 25315467 + SPATA13 chr13 24222819 + Exonic hg38 SARC TCGA-WK-A8XX-01A 2 6 Out-of-frame Intra-chr q12.13 q12.12 102421 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM147-LLGL1 TMEM147 chr19 35545816 + LLGL1 chr17 18229941 + Exonic hg38 SARC TCGA-WK-A8XX-01A 2 4 CDS-3'UTR Inter-chr q13.12 Tumor suppressor gene 102422 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM16-TBC1D26 TRIM16 chr17 15651091 - TBC1D26 chr17 15744243 + Exonic hg38 SARC TCGA-WK-A8XZ-01A 1 7 CDS-3'UTR Intra-chr p12 p12 102423 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX8-SPACA3 DHX8 chr17 43484185 + SPACA3 chr17 32996843 + Exonic hg38 SARC TCGA-WK-A8Y0-01A 130 579 In-Frame Intra-chr q21.31 q11.2 Seq+ 102424 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACLY-TAF15 ACLY chr17 41897749 - TAF15 chr17 35836132 + Exonic hg38 SARC TCGA-WK-A8Y0-01A 84 526 CDS-3'UTR Intra-chr q21.2 q12 Seq+ 102425 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALKBH5-NUF2 ALKBH5 chr17 18185013 + NUF2 chr1 163336751 + Exonic hg38 SARC TCGA-WK-A8Y0-01A 2 24 Out-of-frame Inter-chr p11.2 q23.3 Seq+ 102426 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOCS6-PMS1 SOCS6 chr18 70289090 + PMS1 chr2 189873496 + Exonic hg38 SARC TCGA-WK-A8Y0-01A 2 6 5'UTR-5'UTR Inter-chr q22.2 q32.2 Oncogene Seq+ 102427 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP6V0A1-THCAT158 ATP6V0A1 chr17 42501304 + THCAT158 chr17 47303782 - Exonic hg38 SARC TCGA-WK-A8Y0-01A 1 6 CDS-3'UTR Intra-chr q21.2 q21.32 102428 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNS1-DIRC3 TNS1 chr2 217978765 - DIRC3 chr2 217284863 - Exonic hg38 SARC TCGA-WP-A9GB-01A 17 81 5'UTR-3'UTR Intra-chr q35 q35 102429 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNAO1-FTO GNAO1 chr16 56192616 + FTO chr16 53933985 + Exonic hg38 SARC TCGA-WP-A9GB-01A 1 55 Out-of-frame Intra-chr q13 q12.2 Seq+ 102430 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP48-KALRN USP48 chr1 21701498 - KALRN chr3 124562843 + Exonic hg38 SARC TCGA-WP-A9GB-01A 6 16 In-Frame Inter-chr p36.12 q21.1 Seq+ 102431 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEIS2-BBS2 MEIS2 chr15 36950324 - BBS2 chr16 56511284 - Exonic hg38 SARC TCGA-WP-A9GB-01A 5 14 Out-of-frame Inter-chr q14 Transcription factor q13 Seq+ 102432 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLPTM1-NECTIN2 CLPTM1 chr19 44955467 + NECTIN2 chr19 44865271 + Exonic hg38 SARC TCGA-WP-A9GB-01A 2 13 5'UTR-CDS Intra-chr q13.32 q13.32 102433 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPNPEP1-FAM13B XPNPEP1 chr10 109915011 - FAM13B chr5 137962469 - Exonic hg38 SARC TCGA-WP-A9GB-01A 2 11 Out-of-frame Inter-chr q25.1 q31.2 Seq+ 102434 ChimerSeq TCGA FAWG TCGA_RNA-Seq BBS2-C15orf41 BBS2 chr16 56519746 - C15orf41 chr15 36654098 + Exonic hg38 SARC TCGA-WP-A9GB-01A 3 5 Out-of-frame Inter-chr q13 q14 Seq+ 102435 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAAM1-MNAT1 DAAM1 chr14 59331920 + MNAT1 chr14 60879714 + Exonic hg38 SARC TCGA-WP-A9GB-01A 1 13 In-Frame Intra-chr q23.1 q23.1 Seq+ 102436 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYLK-USP48 MYLK chr3 123793677 - USP48 chr1 21690099 - Exonic hg38 SARC TCGA-WP-A9GB-01A 3 5 In-Frame Inter-chr q21.1 p36.12 Seq+ 102437 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC1-MED4 TTC1 chr5 160010858 + MED4 chr13 48090418 - Exonic hg38 SARC TCGA-WP-A9GB-01A 1 10 Out-of-frame Inter-chr q33.3 q14.2 102438 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYSTM1-MYLK CYSTM1 chr5 140194652 + MYLK chr3 123752538 - Exonic hg38 SARC TCGA-WP-A9GB-01A 2 3 Out-of-frame Inter-chr q31.3 q21.1 102439 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMFR-FTO AMFR chr16 56367444 - FTO chr16 53933985 + Exonic hg38 SARC TCGA-WP-A9GB-01A 1 4 In-Frame Intra-chr q13 q12.2 102440 ChimerSeq TCGA FAWG TCGA_RNA-Seq INO80-CYSTM1 INO80 chr15 41044905 - CYSTM1 chr5 140281496 + Exonic hg38 SARC TCGA-WP-A9GB-01A 1000 1000 Out-of-frame Inter-chr q15.1 q31.3 102441 ChimerSeq TCGA FAWG TCGA_RNA-Seq RB1-TEX21P RB1 chr13 48381443 + TEX21P chr14 64346428 - Exonic hg38 SARC TCGA-X2-A95T-01A 7 29 CDS-3'UTR Inter-chr q14.2 Oncogene Tumor suppressor gene q23.3 102442 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC4A1AP-ZNF512 SLC4A1AP chr2 27675692 + ZNF512 chr2 27615168 + Exonic hg38 SARC TCGA-X2-A95T-01A 2 37 In-Frame Intra-chr p23.3 p23.3 Transcription factor 102443 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM98C-PPP5C FAM98C chr19 38403694 + PPP5C chr19 46375604 + Exonic hg38 SARC TCGA-X2-A95T-01A 4 9 Out-of-frame Intra-chr q13.2 q13.32 Seq+ 102444 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3YL1-MTHFD1L SH3YL1 chr2 229966 - MTHFD1L chr6 150922205 + Exonic hg38 SARC TCGA-X2-A95T-01A 3 11 Out-of-frame Inter-chr p25.3 q25.1 Seq+ 102445 ChimerSeq TCGA FAWG TCGA_RNA-Seq RB1-ESR2 RB1 chr13 48381443 + ESR2 chr14 64283075 - Exonic hg38 SARC TCGA-X2-A95T-01A 1 3 CDS-5'UTR Inter-chr q14.2 Oncogene Tumor suppressor gene q23.3 Tumor suppressor gene Transcription factor Seq+ 102446 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM222B-PRPSAP1 FAM222B chr17 28842682 - PRPSAP1 chr17 76313891 - Exonic hg38 SARC TCGA-X6-A7W8-01A 12 41 5'UTR-CDS Intra-chr q11.2 q25.1 Seq+ 102447 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAN3-MICU2 PAN3 chr13 28220378 + MICU2 chr13 21522650 - Exonic hg38 SARC TCGA-X6-A7W8-01A 9 5 In-Frame Intra-chr q12.2 q12.11 Seq+ 102448 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIEZO2-IMPA2 PIEZO2 chr18 10672690 - IMPA2 chr18 12030343 + Exonic hg38 SARC TCGA-X6-A7W8-01A 5 19 Out-of-frame Intra-chr p11.21 p11.21 Seq+ 102449 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARFGEF2-TTLL9 ARFGEF2 chr20 49017550 + TTLL9 chr20 31922963 + Exonic hg38 SARC TCGA-X6-A7W8-01A 6 8 In-Frame Intra-chr q13.13 q11.21 Seq+ 102450 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K14-SRP68 MAP3K14 chr17 45284812 - SRP68 chr17 76067330 - Exonic hg38 SARC TCGA-X6-A7W8-01A 2 8 Out-of-frame Intra-chr q21.31 q25.1 Seq+ 102451 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACACA-PARD6G ACACA chr17 37358999 - PARD6G chr18 80202932 - Exonic hg38 SARC TCGA-X6-A7W8-01A 2 5 5'UTR-CDS Inter-chr q23 Seq+ 102452 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA1-CAP1P2 PLEKHA1 chr10 122413047 + CAP1P2 chr10 43605699 - Exonic hg38 SARC TCGA-X6-A7WA-01A 15 54 Out-of-frame Intra-chr q26.13 q11.21 Seq+ 102453 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDZD8-CACUL1 PDZD8 chr10 117318872 - CACUL1 chr10 118674460 - Exonic hg38 SARC TCGA-X6-A7WA-01A 14 28 CDS-3'UTR Intra-chr q26.11 q26.11 Seq+ 102454 ChimerSeq TCGA FAWG TCGA_RNA-Seq S1PR5-CDC37 S1PR5 chr19 10517398 - CDC37 chr19 10396203 - Exonic hg38 SARC TCGA-X6-A7WA-01A 1 4 5'UTR-CDS Intra-chr p13.2 p13.2 102455 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHS1-BTBD16 PLEKHS1 chr10 113769900 + BTBD16 chr10 122329480 + Exonic hg38 SARC TCGA-X6-A7WA-01A 1 2 Out-of-frame Intra-chr q25.3 q26.13 102456 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF239-ARMS2 ZNF239 chr10 43567899 - ARMS2 chr10 122456907 + Exonic hg38 SARC TCGA-X6-A7WA-01A 1 2 Out-of-frame Intra-chr q11.21 Transcription factor q26.13 102457 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLF12-CAMK2G KLF12 chr13 73943981 - CAMK2G chr10 73817554 - Exonic hg38 SARC TCGA-X6-A7WB-01A 14 26 In-Frame Inter-chr q22.1 Transcription factor q22.2 Seq+ 102458 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMK2G-BMS1P4 CAMK2G chr10 73847225 - BMS1P4 chr10 73705078 - Exonic hg38 SARC TCGA-X6-A7WB-01A 11 24 3'UTR-3'UTR Intra-chr q22.2 q22.2 102459 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDFY2-STK26 WDFY2 chr13 51584824 + STK26 chrX 132054631 + Exonic hg38 SARC TCGA-X6-A7WB-01A 5 33 Out-of-frame Inter-chr q14.3 q26.2 102460 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLTSCR1L-TMEM217 GLTSCR1L chr6 42782101 + TMEM217 chr6 37219041 - Exonic hg38 SARC TCGA-X6-A7WB-01A 8 6 Out-of-frame Intra-chr p21.2 Seq+ 102461 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPARD-SLC22A7 PPARD chr6 35411217 + SLC22A7 chr6 43299898 + Exonic hg38 SARC TCGA-X6-A7WB-01A 3 16 In-Frame Intra-chr p21.31 Transcription factor p21.1 Seq+ 102462 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEURL4-SOX15 NEURL4 chr17 7326255 - SOX15 chr17 7589738 - Exonic hg38 SARC TCGA-X6-A7WC-01A 15 27 CDS-5'UTR Intra-chr p13.1 p13.1 Tumor suppressor gene Transcription factor Seq+ 102463 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF17-AAMDC ARHGEF17 chr11 73311830 + AAMDC chr11 77842479 + Exonic hg38 SARC TCGA-X6-A7WC-01A 12 14 In-Frame Intra-chr q13.4 q14.1 102464 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP3-NLGN2 SENP3 chr17 7565764 + NLGN2 chr17 7405034 + Exonic hg38 SARC TCGA-X6-A7WC-01A 9 22 CDS-3'UTR Intra-chr p13.1 102465 ChimerSeq TCGA FAWG TCGA_RNA-Seq WRN-WDR70 WRN chr8 31083779 + WDR70 chr5 37697655 + Exonic hg38 SARC TCGA-X6-A7WC-01A 3 20 In-Frame Inter-chr p12 Oncogene p13.2 102466 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNIP1-SGCD TNIP1 chr5 151039097 - SGCD chr5 156123856 + Exonic hg38 SARC TCGA-X6-A7WC-01A 2 13 CDS-5'UTR Intra-chr q33.1 q33.2 Seq+ 102467 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF431-EPS15L1 ZNF431 chr19 21143643 + EPS15L1 chr19 16417637 - Exonic hg38 SARC TCGA-X6-A7WC-01A 3 7 In-Frame Intra-chr p12 Transcription factor p13.11 Seq+ 102468 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTLL4-DHRSX TTLL4 chr2 218711037 + DHRSX chrY 2291603 - Exonic hg38 SARC TCGA-X6-A7WC-01A 2 3 5'UTR-CDS Inter-chr q35 p22.33 102469 ChimerSeq TCGA FAWG TCGA_RNA-Seq VWCE-SH3D19 VWCE chr11 61280624 - SH3D19 chr4 151176955 - Exonic hg38 SARC TCGA-X6-A7WC-01A 1 7 CDS-5'UTR Inter-chr q12.2 q31.3 Seq+ 102470 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF131-GHR ZNF131 chr5 43068217 + GHR chr5 42688890 + Exonic hg38 SARC TCGA-X6-A7WC-01A 2 3 5'UTR-CDS Intra-chr p12 Transcription factor p13.1 Seq+ 102471 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGCD-HMMR SGCD chr5 156595051 + HMMR chr5 163463856 + Exonic hg38 SARC TCGA-X6-A7WC-01A 1 3 In-Frame Intra-chr q33.2 q34 102472 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF398-TPK1 ZNF398 chr7 149147766 + TPK1 chr7 144835618 - Exonic hg38 SARC TCGA-X6-A7WC-01A 1 2 CDS-5'UTR Intra-chr q36.1 Transcription factor q35 Seq+ 102473 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLTC-DNAH17 CLTC chr17 59620173 + DNAH17 chr17 78515022 - Exonic hg38 SARC TCGA-X6-A8C2-01A 17 62 In-Frame Intra-chr q23.1 q25.3 Seq+ 102474 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTMR12-MAEL MTMR12 chr5 32312758 - MAEL chr1 166992686 + Exonic hg38 SARC TCGA-X6-A8C2-01A 9 39 Out-of-frame Inter-chr p13.3 q24.1 Seq+ 102475 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRC2A-TREM2 PRRC2A chr6 31620858 + TREM2 chr6 41159882 - Exonic hg38 SARC TCGA-X6-A8C2-01A 3 32 3'UTR-CDS Intra-chr p21.1 Seq+ 102476 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTFR1-LIG1 MTFR1 chr8 65693759 + LIG1 chr19 48143963 - Exonic hg38 SARC TCGA-X6-A8C2-01A 4 19 In-Frame Inter-chr q13.1 q13.33 Tumor suppressor gene Seq+ 102477 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNFAIP6-ORC4 TNFAIP6 chr2 151357760 + ORC4 chr2 147938393 - Exonic hg38 SARC TCGA-X6-A8C2-01A 4 17 In-Frame Intra-chr q23.3 q23.1 Seq+ 102478 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF595-RAB28 ZNF595 chr4 53491 + RAB28 chr4 13381594 - Exonic hg38 SARC TCGA-X6-A8C2-01A 6 7 Out-of-frame Intra-chr p16.3 Transcription factor p15.33 Seq+ 102479 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPH6-COX5A DPH6 chr15 35410835 - COX5A chr15 74920442 - Exonic hg38 SARC TCGA-X6-A8C2-01A 1 19 CDS-3'UTR Intra-chr q14 q24.2 102480 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAMP2-SLCO3A1 SCAMP2 chr15 74873199 - SLCO3A1 chr15 92094881 + Exonic hg38 SARC TCGA-X6-A8C2-01A 1 11 Out-of-frame Intra-chr q24.1 q26.1 Seq+ 102481 ChimerSeq TCGA FAWG TCGA_RNA-Seq LYRM7-SLC6A7 LYRM7 chr5 131171038 + SLC6A7 chr5 150194728 + Exonic hg38 SARC TCGA-X6-A8C2-01A 3 2 In-Frame Intra-chr q23.3 q32 102482 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANK-CACNB4 TANK chr2 161160486 + CACNB4 chr2 151883370 - Exonic hg38 SARC TCGA-X6-A8C2-01A 2 6 5'UTR-5'UTR Intra-chr q24.2 Tumor suppressor gene q23.3 Seq+ 102483 ChimerSeq TCGA FAWG TCGA_RNA-Seq BACH2-BIVM BACH2 chr6 90206569 - BIVM chr13 102816428 + Exonic hg38 SARC TCGA-X6-A8C2-01A 2 4 5'UTR-5'UTR Inter-chr q15 Transcription factor q33.1 102484 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFATC2IP-KIAA0556 NFATC2IP chr16 28952204 + KIAA0556 chr16 27749584 + Exonic hg38 SARC TCGA-X6-A8C2-01A 2 4 In-Frame Intra-chr p11.2 p12.1 Seq+ 102485 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF6-NDC1 ARHGEF6 chrX 136732102 - NDC1 chr1 53809746 - Exonic hg38 SARC TCGA-X6-A8C2-01A 1 6 Out-of-frame Inter-chr q26.3 p32.3 102486 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIF1-TNFAIP6 RIF1 chr2 151469864 + TNFAIP6 chr2 151363943 + Exonic hg38 SARC TCGA-X6-A8C2-01A 1 4 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 102487 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4C-PSPH KDM4C chr9 7049200 + PSPH chr7 56034103 - Exonic hg38 SARC TCGA-X6-A8C2-01A 1 3 CDS-5'UTR Inter-chr p24.1 p11.2 102488 ChimerSeq TCGA FAWG TCGA_RNA-Seq RORA-LOXL1 RORA chr15 60592387 - LOXL1 chr15 73942854 + Exonic hg38 SARC TCGA-X6-A8C3-01A 23 92 In-Frame Intra-chr q22.2 Transcription factor q24.1 Seq+ 102489 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENOSF1-PPT1 ENOSF1 chr18 706470 - PPT1 chr1 40092507 - Exonic hg38 SARC TCGA-X6-A8C3-01A 14 121 In-Frame Inter-chr p11.32 p34.2 Seq+ 102490 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPF19-NLRP14 PRPF19 chr11 60900582 - NLRP14 chr11 7038566 + Exonic hg38 SARC TCGA-X6-A8C3-01A 6 10 CDS-5'UTR Intra-chr q12.2 p15.4 Seq+ 102491 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACF1-SHISA6 MACF1 chr1 39258028 + SHISA6 chr17 11379414 + Exonic hg38 SARC TCGA-X6-A8C3-01A 3 11 Out-of-frame Inter-chr p34.3 p12 Seq+ 102492 ChimerSeq TCGA FAWG TCGA_RNA-Seq RABGEF1-CPED1 RABGEF1 chr7 66712224 + CPED1 chr7 121015665 + Exonic hg38 SARC TCGA-X6-A8C3-01A 3 11 5'UTR-CDS Intra-chr q11.21 q31.31 102493 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDHAF2-TPH1 SDHAF2 chr11 61438113 + TPH1 chr11 18040788 - Exonic hg38 SARC TCGA-X6-A8C3-01A 2 8 CDS-5'UTR Intra-chr q12.2 p15.1 Seq+ 102494 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM168A-OSBPL5 FAM168A chr11 73468405 - OSBPL5 chr11 3119631 - Exonic hg38 SARC TCGA-X6-A8C3-01A 1 6 Out-of-frame Intra-chr q13.4 p15.4 Seq+ 102495 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA4-UBE2E3 ITGA4 chr2 181482651 + UBE2E3 chr2 181060665 + Exonic hg38 SARC TCGA-X6-A8C3-01A 1 2 In-Frame Intra-chr q31.3 q31.3 102496 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPDU1-DNAH9 MPDU1 chr17 7583965 + DNAH9 chr17 11886825 + Exonic hg38 SARC TCGA-X6-A8C4-01A 6 39 Out-of-frame Intra-chr p13.1 p12 Seq+ 102497 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT11-PTPRN2 GALNT11 chr7 152025884 + PTPRN2 chr7 158489785 - Exonic hg38 SARC TCGA-X6-A8C4-01A 2 10 In-Frame Intra-chr q36.1 q36.3 Seq+ 102498 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBGCP6-TCF7L1 TUBGCP6 chr22 50229404 - TCF7L1 chr2 85302484 + Exonic hg38 SARC TCGA-X6-A8C4-01A 2 6 In-Frame Inter-chr q13.33 p11.2 Oncogene Transcription factor Seq+ 102499 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB21-CRADD RAB21 chr12 71782658 + CRADD chr12 93859319 + Exonic hg38 SARC TCGA-X6-A8C4-01A 2 4 CDS-5'UTR Intra-chr q21.1 q22 Seq+ 102500 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53-MYH2 TP53 chr17 7687377 - MYH2 chr17 10549417 - Exonic hg38 SARC TCGA-X6-A8C4-01A 1 8 5'UTR-5'UTR Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.1 102501 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX40-UNC45B DHX40 chr17 59588053 + UNC45B chr17 35148261 + Exonic hg38 SARC TCGA-X6-A8C4-01A 1 7 CDS-5'UTR Intra-chr q23.1 q12 102502 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF177-TECR ZNF177 chr19 9364948 + TECR chr19 14562525 + Exonic hg38 SARC TCGA-X6-A8C5-01A 16 46 5'UTR-5'UTR Intra-chr p13.2 Transcription factor p13.12 Seq+ 102503 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFYVE28-CRMP1 ZFYVE28 chr4 2418285 - CRMP1 chr4 5856307 - Exonic hg38 SARC TCGA-X6-A8C5-01A 4 17 Out-of-frame Intra-chr p16.3 p16.2 Seq+ 102504 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYH10-OLFM4 MYH10 chr17 8630654 - OLFM4 chr13 53034348 + Exonic hg38 SARC TCGA-X6-A8C5-01A 5 12 5'UTR-CDS Inter-chr p13.1 q14.3 Tumor suppressor gene Seq+ 102505 ChimerSeq TCGA FAWG TCGA_RNA-Seq EVC2-TMED11P EVC2 chr4 5663107 - TMED11P chr4 1116410 - Exonic hg38 SARC TCGA-X6-A8C5-01A 5 10 CDS-3'UTR Intra-chr p16.2 p16.3 102506 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53-DNAH2 TP53 chr17 7687377 - DNAH2 chr17 7830300 + Exonic hg38 SARC TCGA-X6-A8C6-01A 12 135 5'UTR-CDS Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.1 Seq+ 102507 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD44-EXT2 CD44 chr11 35139370 + EXT2 chr11 44244149 + Exonic hg38 SARC TCGA-X6-A8C6-01A 30 40 Out-of-frame Intra-chr p13 Oncogene Tumor suppressor gene p11.2 Oncogene Tumor suppressor gene Seq+ 102508 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMB1-NRCAM LAMB1 chr7 107986022 - NRCAM chr7 108160492 - Exonic hg38 SARC TCGA-X6-A8C6-01A 11 26 In-Frame Intra-chr q31.1 q31.1 Tumor suppressor gene Seq+ 102509 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIDINS220-COLEC11 KIDINS220 chr2 8750112 - COLEC11 chr2 3604315 + Exonic hg38 SARC TCGA-X6-A8C6-01A 7 18 Out-of-frame Intra-chr p25.1 p25.3 Seq+ 102510 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASC4-LRRC8D CASC4 chr15 44338317 + LRRC8D chr1 89933067 + Exonic hg38 SARC TCGA-X6-A8C6-01A 6 17 5'UTR-5'UTR Inter-chr q15.3 p22.2 Seq+ 102511 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTPS2-RGN CTPS2 chrX 16698238 - RGN chrX 47081128 + Exonic hg38 SARC TCGA-X6-A8C6-01A 3 29 Out-of-frame Intra-chr p22.2 p11.3 Seq+ 102512 ChimerSeq TCGA FAWG TCGA_RNA-Seq EMC7-CD27 EMC7 chr15 34095895 - CD27 chr12 6445424 + Exonic hg38 SARC TCGA-X6-A8C6-01A 6 16 CDS-3'UTR Inter-chr q14 p13.31 Seq+ 102513 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO8-PALLD FBXO8 chr4 174283410 - PALLD chr4 168668190 + Exonic hg38 SARC TCGA-X6-A8C6-01A 7 9 5'UTR-5'UTR Intra-chr q34.1 q32.3 Seq+ 102514 ChimerSeq TCGA FAWG TCGA_RNA-Seq REPS2-GLRA2 REPS2 chrX 17103779 + GLRA2 chrX 14690710 + Exonic hg38 SARC TCGA-X6-A8C6-01A 4 12 In-Frame Intra-chr p22.2 p22.2 Seq+ 102515 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIRA-NSMCE2 HIRA chr22 19431440 - NSMCE2 chr8 125357219 + Exonic hg38 SARC TCGA-X6-A8C6-01A 3 15 In-Frame Inter-chr q11.21 Tumor suppressor gene q24.13 Seq+ 102516 ChimerSeq TCGA FAWG TCGA_RNA-Seq DERA-CA3 DERA chr12 15911414 + CA3 chr8 85439712 + Exonic hg38 SARC TCGA-X6-A8C6-01A 2 16 In-Frame Inter-chr p12.3 q21.2 Seq+ 102517 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIMK1-SEM1 LIMK1 chr7 74109036 + SEM1 chr7 96694891 - Exonic hg38 SARC TCGA-X6-A8C6-01A 3 12 Out-of-frame Intra-chr q11.23 TKL:LISK q21.3 102518 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIMK1-GNAT3 LIMK1 chr7 74115958 + GNAT3 chr7 80494647 - Exonic hg38 SARC TCGA-X6-A8C6-01A 4 6 In-Frame Intra-chr q11.23 TKL:LISK q21.11 Seq+ 102519 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM2-NTN4 R3HDM2 chr12 57395749 - NTN4 chr12 95683711 - Exonic hg38 SARC TCGA-X6-A8C6-01A 3 9 5'UTR-CDS Intra-chr q13.3 q22 Seq+ 102520 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUCO-DENND1B SUCO chr1 172578389 + DENND1B chr1 197772932 - Exonic hg38 SARC TCGA-X6-A8C6-01A 3 7 Out-of-frame Intra-chr q24.3 q31.3 Seq+ 102521 ChimerSeq TCGA FAWG TCGA_RNA-Seq COLEC11-PINX1 COLEC11 chr2 3604470 + PINX1 chr8 10834775 - Exonic hg38 SARC TCGA-X6-A8C6-01A 2 8 CDS-3'UTR Inter-chr p25.3 p23.1 Tumor suppressor gene Seq+ 102522 ChimerSeq TCGA FAWG TCGA_RNA-Seq FSD1L-OTUD7B FSD1L chr9 105448235 + OTUD7B chr1 149977576 - Exonic hg38 SARC TCGA-X6-A8C6-01A 2 5 CDS-5'UTR Inter-chr q31.2 q21.2 Seq+ 102523 ChimerSeq TCGA FAWG TCGA_RNA-Seq UCK2-PBX1 UCK2 chr1 165891322 + PBX1 chr1 164563238 + Exonic hg38 SARC TCGA-X6-A8C6-01A 2 4 In-Frame Intra-chr q24.1 q23.3 Oncogene Transcription factor Seq+ 102524 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIDINS220-PINX1 KIDINS220 chr2 8750112 - PINX1 chr8 10834775 - Exonic hg38 SARC TCGA-X6-A8C6-01A 1 6 3'UTR-3'UTR Inter-chr p25.1 p23.1 Tumor suppressor gene 102525 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRACR2A-SYT10 CRACR2A chr12 3696772 - SYT10 chr12 33426495 - Exonic hg38 SARC TCGA-X6-A8C6-01A 1 5 Out-of-frame Intra-chr p13.32 p11.1 102526 ChimerSeq TCGA FAWG TCGA_RNA-Seq SS18-SSX1 SS18 chr18 26032399 - SSX1 chrX 48263782 + Exonic hg38 SARC TCGA-X6-A8C7-01A 84 344 In-Frame Inter-chr q11.2 p11.23 Oncogene KB Pub Seq+ 102527 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSE1-LBP GSE1 chr16 85171807 + LBP chr20 38376625 + Exonic hg38 SARC TCGA-X6-A8C7-01A 10 38 5'UTR-CDS Inter-chr q24.1 q11.23 102528 ChimerSeq TCGA FAWG TCGA_RNA-Seq NKD1-SPATC1L NKD1 chr16 50549555 + SPATC1L chr21 46168658 - Exonic hg38 SARC TCGA-X9-A971-01A 6 39 CDS-5'UTR Inter-chr q12.1 Seq+ 102529 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEAK1-ZBTB25 PEAK1 chr15 77420006 - ZBTB25 chr14 64449638 - Exonic hg38 SARC TCGA-X9-A971-01A 8 13 5'UTR-CDS Inter-chr q24.3 q23.3 Transcription factor Seq+ 102530 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFP3-DGCR2 ZFP3 chr17 5078575 + DGCR2 chr22 19068225 - Exonic hg38 SARC TCGA-X9-A971-01A 3 10 5'UTR-CDS Inter-chr p13.2 Transcription factor q11.21 Seq+ 102531 ChimerSeq TCGA FAWG TCGA_RNA-Seq PELI2-FOXN3 PELI2 chr14 56118737 + FOXN3 chr14 89412490 - Exonic hg38 SARC TCGA-X9-A971-01A 3 7 CDS-5'UTR Intra-chr q22.3 q32.11 Transcription factor Seq+ 102532 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEAK1-TEX21P PEAK1 chr15 77420006 - TEX21P chr14 64354922 - Exonic hg38 SARC TCGA-X9-A971-01A 1 7 5'UTR-5'UTR Inter-chr q24.3 q23.3 102533 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBFA2T2-SNTA1 CBFA2T2 chr20 33490301 + SNTA1 chr20 33439026 - Exonic hg38 SARC TCGA-X9-A971-01A 1 6 In-Frame Intra-chr q11.21 q11.21 Seq+ 102534 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL6A2-PSMD4 COL6A2 chr21 46122148 + PSMD4 chr1 151267191 + Exonic hg38 SARC TCGA-Z4-A8JB-01A 7 1 Out-of-frame Inter-chr q22.3 q21.3 102535 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF469-COL1A1 ZNF469 chr16 88440091 + COL1A1 chr17 50197033 - Exonic hg38 SARC TCGA-Z4-A8JB-01A 1000 1000 Out-of-frame Inter-chr q24.2 Transcription factor q21.33 Oncogene 102536 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDIT3-FUS DDIT3 chr12 57520418 - FUS chr16 31189665 + Exonic hg38 SARC TCGA-Z4-A9VC-01A 3 23 5'UTR-5'UTR Inter-chr q13.3 Oncogene Transcription factor p11.2 Tumor suppressor gene KB Pub 102537 ChimerSeq TCGA FAWG TCGA_RNA-Seq SS18-SSX2 SS18 chr18 26032399 - SSX2 chrX 52700578 - Exonic hg38 SARC TCGA-Z4-AAPF-01A 47 83 CDS-5'UTR Inter-chr q11.2 p11.22 KB Pub Seq+ 102538 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDGFRA-USP8 PDGFRA chr4 54290554 + USP8 chr15 50459000 + Exonic hg38 SARC TCGA-Z4-AAPG-01A 15 66 In-Frame Inter-chr q12 Oncogene q21.2 Seq+ 102539 ChimerSeq TCGA FAWG TCGA_RNA-Seq GARS-HOXA13 GARS chr7 30612245 + HOXA13 chr7 27198442 - Exonic hg38 SKCM TCGA-3N-A9WB-06A 5 33 Out-of-frame Intra-chr p14.3 p15.2 Transcription factor Seq+ 102540 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP2C-NTNG1 SRGAP2C chr1 121324640 + NTNG1 chr1 107324282 + Exonic hg38 SKCM TCGA-3N-A9WB-06A 4 3 In-Frame Intra-chr p11.2 p13.3 102541 ChimerSeq TCGA FAWG TCGA_RNA-Seq AIF1L-NRSN2 AIF1L chr9 131096863 + NRSN2 chr20 349249 + Exonic hg38 SKCM TCGA-3N-A9WC-06A 12 30 5'UTR-5'UTR Inter-chr q34.12 p13 Tumor suppressor gene Seq+ 102542 ChimerSeq TCGA FAWG TCGA_RNA-Seq DESI2-PGBD5 DESI2 chr1 244653355 + PGBD5 chr1 230357321 - Exonic hg38 SKCM TCGA-3N-A9WC-06A 12 15 Out-of-frame Intra-chr q44 q42.13 Seq+ 102543 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXK2-MS4A12 FOXK2 chr17 82563548 + MS4A12 chr11 60497313 + Exonic hg38 SKCM TCGA-3N-A9WC-06A 11 18 CDS-5'UTR Inter-chr q25.3 Transcription factor q12.2 Seq+ 102544 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK32A-PDXDC1 STK32A chr5 147361614 + PDXDC1 chr16 15016129 + Exonic hg38 SKCM TCGA-3N-A9WC-06A 2 5 CDS-5'UTR Inter-chr q32 p13.11 102545 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRSN2-OSBPL1A NRSN2 chr20 347142 + OSBPL1A chr18 24196200 - Exonic hg38 SKCM TCGA-3N-A9WC-06A 2 3 5'UTR-CDS Inter-chr p13 Tumor suppressor gene q11.2 Seq+ 102546 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK13-YAE1D1 CDK13 chr7 40002031 + YAE1D1 chr7 39570506 + Exonic hg38 SKCM TCGA-3N-A9WC-06A 1 5 Out-of-frame Intra-chr p14.1 p14.1 102547 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1E-ADAM10 MYO1E chr15 59372498 - ADAM10 chr15 58717727 - Exonic hg38 SKCM TCGA-3N-A9WC-06A 1 1 Out-of-frame Intra-chr q22.2 q21.3 102548 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIP2B-TBC1D15 DIP2B chr12 50505240 + TBC1D15 chr12 71921368 + Exonic hg38 SKCM TCGA-BF-A1PU-01A 22 33 Out-of-frame Intra-chr q13.12 q21.1 Seq+ 102549 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR2F-PSMD3 POLR2F chr22 37986312 + PSMD3 chr17 39984294 + Exonic hg38 SKCM TCGA-BF-A1PU-01A 1 2 Out-of-frame Inter-chr q13.1 q21.1 102550 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2C-XRCC2 KMT2C chr7 152309966 - XRCC2 chr7 152660782 - Exonic hg38 SKCM TCGA-BF-A1PV-01A 1 15 In-Frame Intra-chr q36.1 Oncogene Tumor suppressor gene q36.1 Oncogene 102551 ChimerSeq TCGA FAWG TCGA_RNA-Seq AZIN1-ATP6V1C1 AZIN1 chr8 102858013 - ATP6V1C1 chr8 103040798 + Exonic hg38 SKCM TCGA-BF-A1PX-01A 4 10 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 102552 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATL3-ZDHHC14 ATL3 chr11 63671290 - ZDHHC14 chr6 157647259 + Exonic hg38 SKCM TCGA-BF-A1Q0-01A 23 85 Out-of-frame Inter-chr q13.1 q25.3 Seq+ 102553 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRLF3-OPA3 CRLF3 chr17 30824523 - OPA3 chr19 45553911 - Exonic hg38 SKCM TCGA-BF-A1Q0-01A 16 51 Out-of-frame Inter-chr q11.2 q13.32 Seq+ 102554 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEF-PLEKHO2 TEF chr22 41395903 + PLEKHO2 chr15 64848593 + Exonic hg38 SKCM TCGA-BF-A1Q0-01A 14 36 In-Frame Inter-chr q13.2 Transcription factor q22.31 Seq+ 102555 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSMCE1-IL4R NSMCE1 chr16 27257435 - IL4R chr16 27355808 + Exonic hg38 SKCM TCGA-BF-A1Q0-01A 7 44 In-Frame Intra-chr p12.1 p12.1 Seq+ 102556 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHI1-C12orf50 AHI1 chr6 135427167 - C12orf50 chr12 87994743 - Exonic hg38 SKCM TCGA-BF-A1Q0-01A 12 20 In-Frame Inter-chr q23.3 q21.32 Seq+ 102557 ChimerSeq TCGA FAWG TCGA_RNA-Seq RGL1-HMCN1 RGL1 chr1 183806485 + HMCN1 chr1 185846026 + Exonic hg38 SKCM TCGA-BF-A1Q0-01A 8 11 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 102558 ChimerSeq TCGA FAWG TCGA_RNA-Seq UTP20-ANKS1B UTP20 chr12 101317663 + ANKS1B chr12 99053309 - Exonic hg38 SKCM TCGA-BF-A1Q0-01A 3 9 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 102559 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAM-MRC1 STAM chr10 17660548 + MRC1 chr10 17833675 + Exonic hg38 SKCM TCGA-BF-A1Q0-01A 2 3 Out-of-frame Intra-chr p12.33 p12.33 102560 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM178B-NR5A2 TMEM178B chr7 141212704 + NR5A2 chr1 200111202 + Exonic hg38 SKCM TCGA-BF-A1Q0-01A 2 3 Out-of-frame Inter-chr q34 q32.1 Transcription factor Seq+ 102561 ChimerSeq TCGA FAWG TCGA_RNA-Seq EVC2-STK32B EVC2 chr4 5640522 - STK32B chr4 5139905 + Exonic hg38 SKCM TCGA-BF-A3DM-01A 4 16 Out-of-frame Intra-chr p16.2 p16.2 Seq+ 102562 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSPG4-DNM1P49 CSPG4 chr15 75693070 - DNM1P49 chr15 75791758 - Exonic hg38 SKCM TCGA-BF-A5EO-01A 2 20 Out-of-frame Intra-chr q24.2 q24.2 102563 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRAF-ATG7 BRAF chr7 140807960 - ATG7 chr3 11554811 + Exonic hg38 SKCM TCGA-BF-A5EP-01A 56 133 In-Frame Inter-chr q34 TKL:RAF Oncogene p25.3 Seq+ 102564 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIBADH-BRAF HIBADH chr7 27629371 - BRAF chr7 140801560 - Exonic hg38 SKCM TCGA-BF-A5EP-01A 6 10 Out-of-frame Intra-chr p15.2 q34 TKL:RAF Oncogene Seq+ 102565 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRAF-HIBADH BRAF chr7 140800362 - HIBADH chr7 27543100 - Exonic hg38 SKCM TCGA-BF-A5EP-01A 5 2 Out-of-frame Intra-chr q34 TKL:RAF Oncogene p15.2 Seq+ 102566 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A1-SMTN SLC25A1 chr22 19178133 - SMTN chr22 31104316 + Exonic hg38 SKCM TCGA-BF-A5EP-01A 1 12 Out-of-frame Intra-chr q11.21 q12.2 102567 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT11-LMBR1 GALNT11 chr7 152025884 + LMBR1 chr7 156836885 - Exonic hg38 SKCM TCGA-BF-A5EP-01A 2 5 Out-of-frame Intra-chr q36.1 q36.3 Seq+ 102568 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG7-BRAF ATG7 chr3 11426926 + BRAF chr7 140787584 - Exonic hg38 SKCM TCGA-BF-A5EP-01A 1 8 In-Frame Inter-chr p25.3 q34 TKL:RAF Oncogene Seq+ 102569 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPAB-SAMM50 HNRNPAB chr5 178207225 + SAMM50 chr22 43976055 + Exonic hg38 SKCM TCGA-BF-A5EQ-01A 124 590 In-Frame Inter-chr q35.3 q13.31 Seq+ 102570 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRAME-ACO2 PRAME chr22 22556812 - ACO2 chr22 41507791 + Exonic hg38 SKCM TCGA-BF-A5EQ-01A 26 146 5'UTR-5'UTR Intra-chr q13.2 Seq+ 102571 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSBP2-LGALS2 SSBP2 chr5 81615473 - LGALS2 chr22 37571931 - Exonic hg38 SKCM TCGA-BF-A5EQ-01A 8 15 In-Frame Inter-chr q14.1 Tumor suppressor gene q13.1 Seq+ 102572 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC6B-ATXN10 TNRC6B chr22 40178140 + ATXN10 chr22 45729425 + Exonic hg38 SKCM TCGA-BF-A5EQ-01A 6 14 In-Frame Intra-chr q13.1 q13.31 Seq+ 102573 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACO2-TANGO2 ACO2 chr22 41469182 + TANGO2 chr22 20036760 + Exonic hg38 SKCM TCGA-BF-A5EQ-01A 3 18 5'UTR-5'UTR Intra-chr q13.2 q11.21 Seq+ 102574 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERF1B-RNF111 SERF1B chr5 70026515 + RNF111 chr15 59066764 + Exonic hg38 SKCM TCGA-BF-A5EQ-01A 3 6 3'UTR-CDS Inter-chr q22.1 Tumor suppressor gene Seq+ 102575 ChimerSeq TCGA FAWG TCGA_RNA-Seq GFPT2-BRD8 GFPT2 chr5 180353211 - BRD8 chr5 138157267 - Exonic hg38 SKCM TCGA-BF-A5EQ-01A 3 4 Out-of-frame Intra-chr q35.3 q31.2 Seq+ 102576 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF253-SLC1A6 ZNF253 chr19 19865999 + SLC1A6 chr19 14972917 - Exonic hg38 SKCM TCGA-BF-A5EQ-01A 2 8 5'UTR-5'UTR Intra-chr p13.11 Transcription factor p13.12 Seq+ 102577 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM19A5-ZNF354B FAM19A5 chr22 48707844 + ZNF354B chr5 178887621 + Exonic hg38 SKCM TCGA-BF-A5EQ-01A 1 7 Out-of-frame Inter-chr q13.32 q35.3 Transcription factor 102578 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG10-EMC7 ATG10 chr5 81976327 + EMC7 chr15 34096014 - Exonic hg38 SKCM TCGA-BF-A5EQ-01A 1 4 5'UTR-CDS Inter-chr q14.1 q14 102579 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN10-ZNF354A ATXN10 chr22 45740538 + ZNF354A chr5 178727125 - Exonic hg38 SKCM TCGA-BF-A5EQ-01A 1 3 In-Frame Inter-chr q13.31 q35.3 Transcription factor 102580 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP6V0D1-GFOD2 ATP6V0D1 chr16 67480957 - GFOD2 chr16 67685802 - Exonic hg38 SKCM TCGA-BF-A5ER-01A 1 5 CDS-5'UTR Intra-chr q22.1 q22.1 102581 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBG1-URGCP TUBG1 chr17 42615222 + URGCP chr7 43926187 - Exonic hg38 SKCM TCGA-BF-A5ER-01A 1000 1000 Out-of-frame Inter-chr q21.2 p13 102582 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP155-ANKH NUP155 chr5 37370821 - ANKH chr5 14741922 - Exonic hg38 SKCM TCGA-BF-A5ES-01A 11 47 Out-of-frame Intra-chr p13.2 p15.2 Seq+ 102583 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-NADSYN1 PPFIA1 chr11 70362488 + NADSYN1 chr11 71497483 + Exonic hg38 SKCM TCGA-BF-A9VF-01A 76 140 In-Frame Intra-chr q13.3 q13.4 Seq+ 102584 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2CD3-OR7E128P C2CD3 chr11 74161399 - OR7E128P chr11 71894107 + Exonic hg38 SKCM TCGA-BF-A9VF-01A 7 10 Out-of-frame Intra-chr q13.4 q13.4 102585 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIAH1-FAM65A SIAH1 chr16 48385204 - FAM65A chr16 67538424 + Exonic hg38 SKCM TCGA-BF-A9VF-01A 1 8 Out-of-frame Intra-chr q12.1 Tumor suppressor gene Seq+ 102586 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPARA-BCL2L13 PPARA chr22 46151970 + BCL2L13 chr22 17683214 + Exonic hg38 SKCM TCGA-BF-AAOX-01A 3 22 5'UTR-5'UTR Intra-chr q13.31 Tumor suppressor gene Transcription factor q11.21 Seq+ 102587 ChimerSeq TCGA FAWG TCGA_RNA-Seq MFSD12-NPEPPS MFSD12 chr19 3538541 - NPEPPS chr17 47569417 + Exonic hg38 SKCM TCGA-BF-AAOX-01A 3 7 3'UTR-CDS Inter-chr p13.3 q21.32 Seq+ 102588 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLGA2-TULP1 GOLGA2 chr9 128275893 - TULP1 chr6 35512690 - Exonic hg38 SKCM TCGA-BF-AAOX-01A 1 1 Out-of-frame Inter-chr q34.11 p21.31 102589 ChimerSeq TCGA FAWG TCGA_RNA-Seq MALSU1-GPNMB MALSU1 chr7 23307949 + GPNMB chr7 23266517 + Exonic hg38 SKCM TCGA-BF-AAP1-01A 107 323 In-Frame Intra-chr p15.3 p15.3 Seq+ 102590 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNE-BICC1 GNE chr9 36246031 - BICC1 chr10 58620855 + Exonic hg38 SKCM TCGA-BF-AAP1-01A 1 16 In-Frame Inter-chr p13.3 q21.1 Seq+ 102591 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF106-CNTLN ZNF106 chr15 42456958 - CNTLN chr9 17415788 + Exonic hg38 SKCM TCGA-BF-AAP2-01A 6 4 Out-of-frame Inter-chr q15.1 p22.2 102592 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP2-RALY SRGAP2 chr1 206206037 + RALY chr20 34076702 + Exonic hg38 SKCM TCGA-BF-AAP4-01A 18 49 In-Frame Inter-chr q32.1 Tumor suppressor gene q11.22 102593 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASAL2-KIF14 RASAL2 chr1 178283691 + KIF14 chr1 200575691 - Exonic hg38 SKCM TCGA-BF-AAP4-01A 4 34 In-Frame Intra-chr q25.2 Tumor suppressor gene q32.1 Seq+ 102594 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLIC1-NUDT3 CLIC1 chr6 31733566 - NUDT3 chr6 34295685 - Exonic hg38 SKCM TCGA-BF-AAP4-01A 6 9 5'UTR-CDS Intra-chr p21.31 Seq+ 102595 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITCH-JMJD4 ITCH chr20 34445461 + JMJD4 chr1 227734816 - Exonic hg38 SKCM TCGA-BF-AAP4-01A 5 5 Out-of-frame Inter-chr q11.22 q42.13 Seq+ 102596 ChimerSeq TCGA FAWG TCGA_RNA-Seq ECSIT-ELOF1 ECSIT chr19 11513056 - ELOF1 chr19 11554365 - Exonic hg38 SKCM TCGA-BF-AAP4-01A 2 12 In-Frame Intra-chr p13.2 p13.2 Seq+ 102597 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFWD2-DDR2 RFWD2 chr1 176027572 - DDR2 chr1 162753095 + Exonic hg38 SKCM TCGA-BF-AAP4-01A 3 3 Out-of-frame Intra-chr q25.2 Tumor suppressor gene q23.3 TK:DDR Oncogene Tumor suppressor gene 102598 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCP2-C8orf34 DCP2 chr5 112976986 + C8orf34 chr8 68815886 + Exonic hg38 SKCM TCGA-BF-AAP6-01A 73 299 Out-of-frame Inter-chr q22.2 q13.2 Seq+ 102599 ChimerSeq TCGA FAWG TCGA_RNA-Seq APC-SLC27A6 APC chr5 112707882 + SLC27A6 chr5 129028345 + Exonic hg38 SKCM TCGA-BF-AAP6-01A 21 72 Out-of-frame Intra-chr q22.2 Oncogene Tumor suppressor gene q23.3 Seq+ 102600 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCA1-ZNF483 ABCA1 chr9 104883039 - ZNF483 chr9 111576365 + Exonic hg38 SKCM TCGA-BF-AAP6-01A 17 58 In-Frame Intra-chr q31.1 q31.3 Transcription factor Seq+ 102601 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCY2-PARP8 ADCY2 chr5 7784449 + PARP8 chr5 50759643 + Exonic hg38 SKCM TCGA-BF-AAP6-01A 3 65 Out-of-frame Intra-chr p15.31 q11.1 Seq+ 102602 ChimerSeq TCGA FAWG TCGA_RNA-Seq IRX1-ADAMTS16 IRX1 chr5 3596381 + ADAMTS16 chr5 5182044 + Exonic hg38 SKCM TCGA-BF-AAP6-01A 2 12 In-Frame Intra-chr p15.33 Tumor suppressor gene Transcription factor p15.32 Seq+ 102603 ChimerSeq TCGA FAWG TCGA_RNA-Seq RABGAP1-HCN1 RABGAP1 chr9 123020459 + HCN1 chr5 45267253 - Exonic hg38 SKCM TCGA-BF-AAP6-01A 4 3 Out-of-frame Inter-chr q33.2 p12 102604 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK24-MPC2 STK24 chr13 98576745 - MPC2 chr1 167924537 - Exonic hg38 SKCM TCGA-BF-AAP7-01A 26 29 Out-of-frame Inter-chr q32.2 q24.2 Seq+ 102605 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP10-ATP2C2 USP10 chr16 84740369 + ATP2C2 chr16 84408405 + Exonic hg38 SKCM TCGA-D3-A1Q1-06A 22 32 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 102606 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG101-CSRNP2 ATG101 chr12 52070483 + CSRNP2 chr12 51076647 - Exonic hg38 SKCM TCGA-D3-A1Q1-06A 11 25 5'UTR-5'UTR Intra-chr q13.13 q13.12 Transcription factor 102607 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIMKLB-ELP3 RIMKLB chr12 8714041 + ELP3 chr8 28097219 + Exonic hg38 SKCM TCGA-D3-A1Q1-06A 7 26 In-Frame Inter-chr p13.31 p21.1 Seq+ 102608 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR70-AGXT2 WDR70 chr5 37396570 + AGXT2 chr5 35014119 - Exonic hg38 SKCM TCGA-D3-A1Q3-06A 13 108 In-Frame Intra-chr p13.2 p13.2 Seq+ 102609 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAI14-MAPK9 RAI14 chr5 34757598 + MAPK9 chr5 180269409 - Exonic hg38 SKCM TCGA-D3-A1Q3-06A 18 67 In-Frame Intra-chr p13.2 q35.3 Tumor suppressor gene Seq+ 102610 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED15-AHRR MED15 chr22 20555148 + AHRR chr5 376610 + Exonic hg38 SKCM TCGA-D3-A1Q3-06A 9 85 In-Frame Inter-chr q11.21 p15.33 Tumor suppressor gene Transcription factor Seq+ 102611 ChimerSeq TCGA FAWG TCGA_RNA-Seq PI4KA-CDH10 PI4KA chr22 20793193 - CDH10 chr5 24537674 - Exonic hg38 SKCM TCGA-D3-A1Q3-06A 16 34 In-Frame Inter-chr q11.21 p14.1 Seq+ 102612 ChimerSeq TCGA FAWG TCGA_RNA-Seq UFD1L-PLEKHG4B UFD1L chr22 19479083 - PLEKHG4B chr5 181514 + Exonic hg38 SKCM TCGA-D3-A1Q3-06A 6 32 Out-of-frame Inter-chr p15.33 Seq+ 102613 ChimerSeq TCGA FAWG TCGA_RNA-Seq PI4KA-MYO18B PI4KA chr22 20761304 - MYO18B chr22 25781734 + Exonic hg38 SKCM TCGA-D3-A1Q3-06A 2 26 Out-of-frame Intra-chr q11.21 q12.1 Tumor suppressor gene Seq+ 102614 ChimerSeq TCGA FAWG TCGA_RNA-Seq C5orf42-SEMA5A C5orf42 chr5 37165539 - SEMA5A chr5 9237890 - Exonic hg38 SKCM TCGA-D3-A1Q3-06A 4 11 Out-of-frame Intra-chr p13.2 p15.31 Seq+ 102615 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX17-CDH10 DDX17 chr22 38492056 - CDH10 chr5 24498519 - Exonic hg38 SKCM TCGA-D3-A1Q3-06A 1 22 In-Frame Inter-chr q13.1 p14.1 102616 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGCR2-IRX4 DGCR2 chr22 19122128 - IRX4 chr5 1882747 - Exonic hg38 SKCM TCGA-D3-A1Q3-06A 3 7 CDS-5'UTR Inter-chr q11.21 p15.33 Transcription factor Seq+ 102617 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPBL-ROPN1L NIPBL chr5 36976402 + ROPN1L chr5 10442127 + Exonic hg38 SKCM TCGA-D3-A1Q3-06A 2 10 CDS-5'UTR Intra-chr p13.2 p15.2 Seq+ 102618 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK3-MAPK1 SHANK3 chr22 50676693 + MAPK1 chr22 21799128 - Exonic hg38 SKCM TCGA-D3-A1Q3-06A 1 13 3'UTR-CDS Intra-chr q11.22 Oncogene 102619 ChimerSeq TCGA FAWG TCGA_RNA-Seq OXCT1-GHR OXCT1 chr5 41840451 - GHR chr5 42565864 + Exonic hg38 SKCM TCGA-D3-A1Q3-06A 1 7 Out-of-frame Intra-chr p13.1 p13.1 Seq+ 102620 ChimerSeq TCGA FAWG TCGA_RNA-Seq HCN1-SPEF2 HCN1 chr5 45645185 - SPEF2 chr5 35667072 + Exonic hg38 SKCM TCGA-D3-A1Q3-06A 1 6 In-Frame Intra-chr p12 p13.2 Seq+ 102621 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAP-CDH12 DAP chr5 10748175 - CDH12 chr5 22212639 - Exonic hg38 SKCM TCGA-D3-A1Q3-06A 1 4 CDS-5'UTR Intra-chr p15.2 p14.3 102622 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA3C-PPP1R12C SEMA3C chr7 80789306 - PPP1R12C chr19 55103568 - Exonic hg38 SKCM TCGA-D3-A1Q4-06A 8 174 In-Frame Inter-chr q21.11 q13.42 Seq+ 102623 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWP1-ESRP1 WWP1 chr8 86342930 + ESRP1 chr8 94662501 + Exonic hg38 SKCM TCGA-D3-A1Q4-06A 20 36 5'UTR-CDS Intra-chr q21.3 q22.1 Tumor suppressor gene Seq+ 102624 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFAF6-LRRCC1 NDUFAF6 chr8 94980973 + LRRCC1 chr8 85129919 + Exonic hg38 SKCM TCGA-D3-A1Q4-06A 4 39 Out-of-frame Intra-chr q22.1 q21.2 Seq+ 102625 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R12C-RPL28 PPP1R12C chr19 55112467 - RPL28 chr19 55402943 + Exonic hg38 SKCM TCGA-D3-A1Q4-06A 1 22 Out-of-frame Intra-chr q13.42 q13.42 Seq+ 102626 ChimerSeq TCGA FAWG TCGA_RNA-Seq C10orf90-ADAM12 C10orf90 chr10 126670241 - ADAM12 chr10 126330509 - Exonic hg38 SKCM TCGA-D3-A1Q4-06A 1 1 Out-of-frame Intra-chr q26.2 q26.2 102627 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBIN-ARL15 ERBIN chr5 66014725 + ARL15 chr5 53886713 - Exonic hg38 SKCM TCGA-D3-A1Q5-06A 1 47 Out-of-frame Intra-chr q12.3 q11.2 102628 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXDC2-THNSL1 PLXDC2 chr10 19817191 + THNSL1 chr10 25021742 + Exonic hg38 SKCM TCGA-D3-A1Q5-06A 1 11 CDS-5'UTR Intra-chr p12.31 p12.1 Seq+ 102629 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLLT3-DENND4C MLLT3 chr9 20620654 - DENND4C chr9 19276158 + Exonic hg38 SKCM TCGA-D3-A1Q6-06A 2 16 CDS-5'UTR Intra-chr p21.3 p22.1 Seq+ 102630 ChimerSeq TCGA FAWG TCGA_RNA-Seq WTAP-MAS1 WTAP chr6 159739045 + MAS1 chr6 159906920 + Exonic hg38 SKCM TCGA-D3-A1Q7-06A 5 22 CDS-5'UTR Intra-chr q25.3 q25.3 Seq+ 102631 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERC1-METTL4 ERC1 chr12 1236904 + METTL4 chr18 2567654 - Exonic hg38 SKCM TCGA-D3-A1Q9-06A 57 230 5'UTR-5'UTR Inter-chr p11.32 Seq+ 102632 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM39-EDEM2 RBM39 chr20 35738968 - EDEM2 chr20 35131783 - Exonic hg38 SKCM TCGA-D3-A1Q9-06A 9 111 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 102633 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM5A-IQSEC3 KDM5A chr12 333487 - IQSEC3 chr12 157025 + Exonic hg38 SKCM TCGA-D3-A1Q9-06A 2 34 In-Frame Intra-chr p13.33 Tumor suppressor gene Seq+ 102634 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2S2-KCNB1 EIF2S2 chr20 34093675 - KCNB1 chr20 49310799 - Exonic hg38 SKCM TCGA-D3-A1Q9-06A 4 18 CDS-3'UTR Intra-chr q11.22 q13.13 102635 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRIK4-EHBP1L1 GRIK4 chr11 120511887 + EHBP1L1 chr11 65589751 + Exonic hg38 SKCM TCGA-D3-A1Q9-06A 6 6 5'UTR-CDS Intra-chr q23.3 q13.1 102636 ChimerSeq TCGA FAWG TCGA_RNA-Seq POFUT1-PRICKLE2 POFUT1 chr20 32216721 + PRICKLE2 chr3 64198967 - Exonic hg38 SKCM TCGA-D3-A1Q9-06A 3 13 CDS-5'UTR Inter-chr q11.21 p14.1 Seq+ 102637 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD9-C6 CD9 chr12 6225534 + C6 chr5 41186208 - Exonic hg38 SKCM TCGA-D3-A1Q9-06A 2 5 Out-of-frame Inter-chr p13.31 p13.1 Seq+ 102638 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK1-IGHJ6 SHANK1 chr19 50668011 - IGHJ6 chr14 105863239 - Exonic hg38 SKCM TCGA-D3-A1QB-06A 9 0 Out-of-frame Inter-chr q13.33 Seq+ 102639 ChimerSeq TCGA FAWG TCGA_RNA-Seq DBT-CCDC18 DBT chr1 100218644 - CCDC18 chr1 93180054 + Exonic hg38 SKCM TCGA-D3-A2J6-06A 135 201 Out-of-frame Intra-chr p21.2 p22.1 102640 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFAND6-KCNRG ZFAND6 chr15 80098578 + KCNRG chr13 50020214 + Exonic hg38 SKCM TCGA-D3-A2J6-06A 12 69 5'UTR-CDS Inter-chr q25.1 q14.2 Tumor suppressor gene Seq+ 102641 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFAND6-TRIM13 ZFAND6 chr15 80098578 + TRIM13 chr13 50020214 + Exonic hg38 SKCM TCGA-D3-A2J6-06A 12 69 5'UTR-3'UTR Inter-chr q25.1 q14.2 Tumor suppressor gene 102642 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP37-ACSS3 NUP37 chr12 102099106 - ACSS3 chr12 81109560 + Exonic hg38 SKCM TCGA-D3-A2J6-06A 2 24 In-Frame Intra-chr q23.2 q21.31 Seq+ 102643 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYL6B-RAB5B MYL6B chr12 56155592 + RAB5B chr12 55979372 + Exonic hg38 SKCM TCGA-D3-A2J6-06A 3 18 CDS-5'UTR Intra-chr q13.2 q13.2 Seq+ 102644 ChimerSeq TCGA FAWG TCGA_RNA-Seq IREB2-C6orf52 IREB2 chr15 78494264 + C6orf52 chr6 10687164 - Exonic hg38 SKCM TCGA-D3-A2J6-06A 1 23 CDS-5'UTR Inter-chr q25.1 p24.2 102645 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK18-CNTN2 CDK18 chr1 205504796 + CNTN2 chr1 205057921 + Exonic hg38 SKCM TCGA-D3-A2J6-06A 1 14 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 102646 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFAND6-DLEU1 ZFAND6 chr15 80059809 + DLEU1 chr13 50083142 + Exonic hg38 SKCM TCGA-D3-A2J6-06A 1 3 5'UTR-5'UTR Inter-chr q25.1 q14.2 Tumor suppressor gene 102647 ChimerSeq TCGA FAWG TCGA_RNA-Seq KPNA4-WWTR1 KPNA4 chr3 160515452 - WWTR1 chr3 149657309 - Exonic hg38 SKCM TCGA-D3-A2J8-06A 40 323 CDS-5'UTR Intra-chr q25.33 q25.1 Seq+ 102648 ChimerSeq TCGA FAWG TCGA_RNA-Seq BBX-KPNA4 BBX chr3 107748039 + KPNA4 chr3 160509871 - Exonic hg38 SKCM TCGA-D3-A2J8-06A 24 57 In-Frame Intra-chr q13.12 Transcription factor q25.33 Seq+ 102649 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZIC1-BBX ZIC1 chr3 147393942 + BBX chr3 107772628 + Exonic hg38 SKCM TCGA-D3-A2J8-06A 5 10 5'UTR-CDS Intra-chr q24 Tumor suppressor gene Transcription factor q13.12 Transcription factor Seq+ 102650 ChimerSeq TCGA FAWG TCGA_RNA-Seq FARS2-LYRM4 FARS2 chr6 5613320 + LYRM4 chr6 5216738 - Exonic hg38 SKCM TCGA-D3-A2J9-06A 1 21 In-Frame Intra-chr p25.1 p25.1 Seq+ 102651 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPSF6-SEC61B CPSF6 chr12 69262562 + SEC61B chr9 99230337 + Exonic hg38 SKCM TCGA-D3-A2J9-06A 2 1 3'UTR-CDS Inter-chr q15 q22.33 102652 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTBN1-STX8 SPTBN1 chr2 54526566 + STX8 chr17 9378653 - Exonic hg38 SKCM TCGA-D3-A2JA-06A 15 49 In-Frame Inter-chr p16.2 Tumor suppressor gene p13.1 Seq+ 102653 ChimerSeq TCGA FAWG TCGA_RNA-Seq C3orf67-CRTAP C3orf67 chr3 59039557 - CRTAP chr3 33142395 + Exonic hg38 SKCM TCGA-D3-A2JA-06A 2 8 Out-of-frame Intra-chr p14.2 p22.3 Seq+ 102654 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHC2-PTEN SHC2 chr19 438718 - PTEN chr10 87894025 + Exonic hg38 SKCM TCGA-D3-A2JA-06A 1 7 CDS-3'UTR Inter-chr p13.3 q23.31 Oncogene Tumor suppressor gene Seq+ 102655 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KA5-BMP4 RPS6KA5 chr14 91060332 - BMP4 chr14 53953400 - Exonic hg38 SKCM TCGA-D3-A2JA-06A 1 5 Out-of-frame Intra-chr q32.11 q22.2 Tumor suppressor gene Seq+ 102656 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNND1-PACS1 CTNND1 chr11 57762046 + PACS1 chr11 66193486 + Exonic hg38 SKCM TCGA-D3-A2JB-06A 18 112 5'UTR-CDS Intra-chr q12.1 Tumor suppressor gene q13.1 Seq+ 102657 ChimerSeq TCGA FAWG TCGA_RNA-Seq GDPD5-ACER3 GDPD5 chr11 75456757 - ACER3 chr11 77011330 + Exonic hg38 SKCM TCGA-D3-A2JB-06A 4 30 5'UTR-CDS Intra-chr q13.5 q13.5 102658 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMYD2-LPGAT1 SMYD2 chr1 214324708 + LPGAT1 chr1 211751067 - Exonic hg38 SKCM TCGA-D3-A2JB-06A 5 9 In-Frame Intra-chr q32.3 q32.3 Seq+ 102659 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM48-ADAMTS16 TRIM48 chr11 55262311 + ADAMTS16 chr5 5262657 + Exonic hg38 SKCM TCGA-D3-A2JB-06A 4 11 Out-of-frame Inter-chr q11 p15.32 Seq+ 102660 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSF1-OR5AP2 RSF1 chr11 77698487 - OR5AP2 chr11 56642447 - Exonic hg38 SKCM TCGA-D3-A2JB-06A 3 10 CDS-5'UTR Intra-chr q14.1 q12.1 102661 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO10-C5orf38 MYO10 chr5 16877609 - C5orf38 chr5 2755029 + Exonic hg38 SKCM TCGA-D3-A2JC-06A 200 952 In-Frame Intra-chr p15.1 p15.33 Seq+ 102662 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR3H-CTNND2 POLR3H chr22 41540699 - CTNND2 chr5 11732272 - Exonic hg38 SKCM TCGA-D3-A2JC-06A 21 88 In-Frame Inter-chr q13.2 p15.2 Seq+ 102663 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAX1BP1-BRAF TAX1BP1 chr7 27787603 + BRAF chr7 140781693 - Exonic hg38 SKCM TCGA-D3-A2JC-06A 20 78 In-Frame Intra-chr p15.2 q34 TKL:RAF Oncogene Seq+ 102664 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR4458HG-GRAP2 MIR4458HG chr5 8457766 + GRAP2 chr22 39947093 + Exonic hg38 SKCM TCGA-D3-A2JC-06A 22 52 5'UTR-5'UTR Inter-chr p15.31 q13.1 Seq+ 102665 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIP12-MAFF TRIP12 chr2 229921880 - MAFF chr22 38213823 + Exonic hg38 SKCM TCGA-D3-A2JC-06A 6 13 5'UTR-5'UTR Inter-chr q36.3 q13.1 Transcription factor Seq+ 102666 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRMU-ST13 TRMU chr22 46352330 + ST13 chr22 40835887 - Exonic hg38 SKCM TCGA-D3-A2JC-06A 2 26 In-Frame Intra-chr q13.31 q13.2 Tumor suppressor gene Seq+ 102667 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR1A-ACO2 POLR1A chr2 86032272 - ACO2 chr22 41499726 + Exonic hg38 SKCM TCGA-D3-A2JC-06A 1 23 CDS-5'UTR Inter-chr p11.2 q13.2 Seq+ 102668 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNU13-ATXN10 SNU13 chr22 41680244 - ATXN10 chr22 45702689 + Exonic hg38 SKCM TCGA-D3-A2JC-06A 3 7 Out-of-frame Intra-chr q13.2 q13.31 102669 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHISA9-CREB5 SHISA9 chr16 12916815 + CREB5 chr7 28488175 + Exonic hg38 SKCM TCGA-D3-A2JC-06A 2 6 Out-of-frame Inter-chr p13.12 p15.1 Transcription factor Seq+ 102670 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDPK1-HN1L PDPK1 chr16 2577500 + HN1L chr16 1685439 + Exonic hg38 SKCM TCGA-D3-A2JD-06A 1 1 Out-of-frame Intra-chr p13.3 102671 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZSCAN5A-DKKL1 ZSCAN5A chr19 56313283 - DKKL1 chr19 49374717 + Exonic hg38 SKCM TCGA-D3-A2JE-06A 3 271 In-Frame Intra-chr q13.43 Transcription factor q13.33 Seq+ 102672 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF544-GRIN2D ZNF544 chr19 58230462 + GRIN2D chr19 48404734 + Exonic hg38 SKCM TCGA-D3-A2JE-06A 7 24 5'UTR-CDS Intra-chr q13.43 Transcription factor q13.33 Seq+ 102673 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPIDR-UBE2V2 SPIDR chr8 47713641 + UBE2V2 chr8 48043033 + Exonic hg38 SKCM TCGA-D3-A2JE-06A 2 20 In-Frame Intra-chr q11.21 q11.21 102674 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTPBP3-RBM42 GTPBP3 chr19 17339599 + RBM42 chr19 35631140 + Exonic hg38 SKCM TCGA-D3-A2JE-06A 2 4 Out-of-frame Intra-chr p13.11 q13.12 Seq+ 102675 ChimerSeq TCGA FAWG TCGA_RNA-Seq GXYLT2-PRICKLE2 GXYLT2 chr3 72908559 + PRICKLE2 chr3 64163129 - Exonic hg38 SKCM TCGA-D3-A2JG-06A 49 223 In-Frame Intra-chr p13 p14.1 Seq+ 102676 ChimerSeq TCGA FAWG TCGA_RNA-Seq SS18L1-JAM2 SS18L1 chr20 62165514 + JAM2 chr21 25683883 + Exonic hg38 SKCM TCGA-D3-A2JG-06A 36 155 In-Frame Inter-chr q13.33 q21.3 Seq+ 102677 ChimerSeq TCGA FAWG TCGA_RNA-Seq CADPS-FAM19A1 CADPS chr3 62465367 - FAM19A1 chr3 68417280 + Exonic hg38 SKCM TCGA-D3-A2JG-06A 7 37 Out-of-frame Intra-chr p14.2 p14.1 Seq+ 102678 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM4-NLRP1 R3HDM4 chr19 900829 - NLRP1 chr17 5501872 - Exonic hg38 SKCM TCGA-D3-A2JG-06A 3 22 In-Frame Inter-chr p13.3 p13.2 Oncogene Seq+ 102679 ChimerSeq TCGA FAWG TCGA_RNA-Seq MITF-PSMD6 MITF chr3 69739701 + PSMD6 chr3 64022523 - Exonic hg38 SKCM TCGA-D3-A2JG-06A 4 5 Out-of-frame Intra-chr p13 Oncogene Transcription factor p14.1 Seq+ 102680 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC25A-RBM6 CDC25A chr3 48182929 - RBM6 chr3 50048245 + Exonic hg38 SKCM TCGA-D3-A2JG-06A 1 13 In-Frame Intra-chr p21.31 p21.31 Tumor suppressor gene Seq+ 102681 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBIN-TMEM232 ERBIN chr5 66054951 + TMEM232 chr5 110424916 - Exonic hg38 SKCM TCGA-D3-A2JH-06A 8 110 Out-of-frame Intra-chr q12.3 q22.1 102682 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAFB2-AP2A1 SAFB2 chr19 5598793 - AP2A1 chr19 49791935 + Exonic hg38 SKCM TCGA-D3-A2JN-06A 2 2 Out-of-frame Intra-chr p13.3 Tumor suppressor gene Transcription factor q13.33 Seq+ 102683 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP2A1-VRK3 AP2A1 chr19 49792064 + VRK3 chr19 49979242 - Exonic hg38 SKCM TCGA-D3-A2JN-06A 1 3 Out-of-frame Intra-chr q13.33 q13.33 CK1:VRK Seq+ 102684 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELSR1-KIAA1644 CELSR1 chr22 46533627 - KIAA1644 chr22 44300977 - Exonic hg38 SKCM TCGA-D3-A2JO-06A 1 8 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 102685 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-ZNF717 PPFIA1 chr11 70272436 + ZNF717 chr3 75741865 - Exonic hg38 SKCM TCGA-D3-A2JO-06A 1 1 5'UTR-5'UTR Inter-chr q13.3 p12.3 Transcription factor 102686 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRIK2-GPC1 GRIK2 chr6 101399392 + GPC1 chr2 240459030 + Exonic hg38 SKCM TCGA-D3-A2JP-06A 5 5 In-Frame Inter-chr q16.3 q37.3 Seq+ 102687 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM19-PTPRQ RBM19 chr12 113914969 - PTPRQ chr12 80588129 + Exonic hg38 SKCM TCGA-D3-A3BZ-06A 25 109 Out-of-frame Intra-chr q24.21 q21.31 Seq+ 102688 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPRIP-TRAT1 MPRIP chr17 17078076 + TRAT1 chr3 108830670 + Exonic hg38 SKCM TCGA-D3-A3BZ-06A 4 29 Out-of-frame Inter-chr p11.2 q13.13 Seq+ 102689 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGK3-NCK1 SGK3 chr8 66843547 + NCK1 chr3 136948259 + Exonic hg38 SKCM TCGA-D3-A3BZ-06A 5 25 In-Frame Inter-chr q13.1 AGC:SGK q22.3 Seq+ 102690 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFT81-GLIPR1L2 IFT81 chr12 110180571 + GLIPR1L2 chr12 75410434 + Exonic hg38 SKCM TCGA-D3-A3BZ-06A 3 17 In-Frame Intra-chr q24.11 q21.2 Seq+ 102691 ChimerSeq TCGA FAWG TCGA_RNA-Seq NMNAT3-SELENOT NMNAT3 chr3 139677705 - SELENOT chr3 150622385 + Exonic hg38 SKCM TCGA-D3-A3BZ-06A 2 11 5'UTR-CDS Intra-chr q23 q25.1 102692 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK1-RAB8B TAOK1 chr17 29510992 + RAB8B chr15 63244756 + Exonic hg38 SKCM TCGA-D3-A3BZ-06A 2 2 Out-of-frame Inter-chr q11.2 q22.2 102693 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD63-C12orf10 CD63 chr12 55726700 - C12orf10 chr12 53300150 + Exonic hg38 SKCM TCGA-D3-A3C1-06A 551 2084 In-Frame Intra-chr q13.2 q13.13 Seq+ 102694 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIPK2-ARPC1A HIPK2 chr7 139777605 - ARPC1A chr7 99338181 + Exonic hg38 SKCM TCGA-D3-A3C1-06A 55 129 In-Frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q22.1 Seq+ 102695 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2C-LHFPL3 KMT2C chr7 152435626 - LHFPL3 chr7 104736675 + Exonic hg38 SKCM TCGA-D3-A3C1-06A 8 120 Out-of-frame Intra-chr q36.1 Oncogene Tumor suppressor gene q22.2 Seq+ 102696 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCBP2-HMGA2 PCBP2 chr12 53452376 + HMGA2 chr12 65828001 + Exonic hg38 SKCM TCGA-D3-A3C1-06A 17 38 5'UTR-CDS Intra-chr q13.13 q14.3 Transcription factor Seq+ 102697 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT4-AKR1B10 CNOT4 chr7 135509889 - AKR1B10 chr7 134530643 + Exonic hg38 SKCM TCGA-D3-A3C1-06A 6 74 5'UTR-CDS Intra-chr q33 q33 Seq+ 102698 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2H3-NCOR2 GTF2H3 chr12 123645561 + NCOR2 chr12 124378384 - Exonic hg38 SKCM TCGA-D3-A3C1-06A 3 19 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 102699 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM7A-ATP5J2 KDM7A chr7 140127442 - ATP5J2 chr7 99460193 - Exonic hg38 SKCM TCGA-D3-A3C1-06A 2 23 Out-of-frame Intra-chr q34 q22.1 102700 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPF1-PRKACB RPF1 chr1 84479509 + PRKACB chr1 84235180 + Exonic hg38 SKCM TCGA-D3-A3C1-06A 2 10 In-Frame Intra-chr p22.3 Tumor suppressor gene p31.1 Seq+ 102701 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB40C-IRF3 RAB40C chr16 590433 + IRF3 chr19 49663258 - Exonic hg38 SKCM TCGA-D3-A3C1-06A 1 1 In-Frame Inter-chr p13.3 q13.33 Tumor suppressor gene Transcription factor 102702 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2C-IRF5 KMT2C chr7 152282983 - IRF5 chr7 128942071 + Exonic hg38 SKCM TCGA-D3-A3C3-06A 3 13 CDS-5'UTR Intra-chr q36.1 Oncogene Tumor suppressor gene q32.1 Tumor suppressor gene Transcription factor Seq+ 102703 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRF1-RHEB NRF1 chr7 129717376 + RHEB chr7 151484804 - Exonic hg38 SKCM TCGA-D3-A3C3-06A 1 2 Out-of-frame Intra-chr q32.2 Tumor suppressor gene Transcription factor q36.1 Oncogene 102704 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNMT3A-DTNB DNMT3A chr2 25341826 - DTNB chr2 25379323 - Exonic hg38 SKCM TCGA-D3-A3C7-06A 18 29 5'UTR-CDS Intra-chr p23.3 Oncogene Tumor suppressor gene p23.3 Seq+ 102705 ChimerSeq TCGA FAWG TCGA_RNA-Seq ING4-A2ML1 ING4 chr12 6663065 - A2ML1 chr12 8874425 + Exonic hg38 SKCM TCGA-D3-A3CC-06A 251 45 Out-of-frame Intra-chr p13.31 Oncogene Tumor suppressor gene p13.31 Seq+ 102706 ChimerSeq TCGA FAWG TCGA_RNA-Seq CENPBD1P1-PEPD CENPBD1P1 chr19 58575588 + PEPD chr19 33413643 - Exonic hg38 SKCM TCGA-D3-A3CC-06A 38 192 5'UTR-CDS Intra-chr q13.43 q13.11 102707 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP9X-RBBP7 USP9X chrX 41086109 + RBBP7 chrX 16863100 - Exonic hg38 SKCM TCGA-D3-A3CC-06A 29 96 5'UTR-CDS Intra-chr p11.4 Oncogene p22.2 Tumor suppressor gene Seq+ 102708 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1551-A2ML1 KIAA1551 chr12 31960871 + A2ML1 chr12 8851784 + Exonic hg38 SKCM TCGA-D3-A3CC-06A 26 60 Out-of-frame Intra-chr p11.21 p13.31 Seq+ 102709 ChimerSeq TCGA FAWG TCGA_RNA-Seq AEBP2-PRLR AEBP2 chr12 19493986 + PRLR chr5 35118122 - Exonic hg38 SKCM TCGA-D3-A3CC-06A 13 41 CDS-5'UTR Inter-chr p12.3 Transcription factor p13.2 Seq+ 102710 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPRIN2-R3HDM2 CAPRIN2 chr12 30741020 - R3HDM2 chr12 57305663 - Exonic hg38 SKCM TCGA-D3-A3CC-06A 10 39 In-Frame Intra-chr p11.21 q13.3 Seq+ 102711 ChimerSeq TCGA FAWG TCGA_RNA-Seq LONP1-CARD8 LONP1 chr19 5719704 - CARD8 chr19 48215384 - Exonic hg38 SKCM TCGA-D3-A3CC-06A 8 42 In-Frame Intra-chr p13.3 q13.33 Seq+ 102712 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHC1-FGF10 PHC1 chr12 8917791 + FGF10 chr5 44310530 - Exonic hg38 SKCM TCGA-D3-A3CC-06A 11 19 Out-of-frame Inter-chr p13.31 p12 Seq+ 102713 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEPD-GRAMD1A PEPD chr19 33462995 - GRAMD1A chr19 35009119 + Exonic hg38 SKCM TCGA-D3-A3CC-06A 2 26 In-Frame Intra-chr q13.11 q13.11 Seq+ 102714 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYH14-SIGLEC16 MYH14 chr19 50217771 + SIGLEC16 chr19 49973043 + Exonic hg38 SKCM TCGA-D3-A3CC-06A 3 21 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 102715 ChimerSeq TCGA FAWG TCGA_RNA-Seq GIPR-LGALS7 GIPR chr19 45678226 + LGALS7 chr19 38772030 - Exonic hg38 SKCM TCGA-D3-A3CC-06A 4 14 CDS-5'UTR Intra-chr q13.32 Tumor suppressor gene 102716 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF283-DPRX ZNF283 chr19 43837179 + DPRX chr19 53634531 + Exonic hg38 SKCM TCGA-D3-A3CC-06A 1 20 In-Frame Intra-chr q13.31 Transcription factor q13.42 Transcription factor Seq+ 102717 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO9B-DOCK6 MYO9B chr19 17102557 + DOCK6 chr19 11253726 - Exonic hg38 SKCM TCGA-D3-A3CC-06A 2 13 Out-of-frame Intra-chr p13.11 p13.2 Seq+ 102718 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIG1-NTF4 LIG1 chr19 48161372 - NTF4 chr19 49063862 - Exonic hg38 SKCM TCGA-D3-A3CC-06A 2 9 CDS-5'UTR Intra-chr q13.33 Tumor suppressor gene q13.33 Seq+ 102719 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC27A1-KMT5C SLC27A1 chr19 17470707 + KMT5C chr19 55346213 + Exonic hg38 SKCM TCGA-D3-A3CC-06A 1 13 Out-of-frame Intra-chr p13.11 q13.42 102720 ChimerSeq TCGA FAWG TCGA_RNA-Seq RGS17-LAMA2 RGS17 chr6 153131124 - LAMA2 chr6 129049918 + Exonic hg38 SKCM TCGA-D3-A3CC-06A 2 6 5'UTR-CDS Intra-chr q25.2 q22.33 Seq+ 102721 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEAD4-CPM TEAD4 chr12 2960196 + CPM chr12 68932840 - Exonic hg38 SKCM TCGA-D3-A3CC-06A 1 8 5'UTR-5'UTR Intra-chr p13.33 Transcription factor q15 102722 ChimerSeq TCGA FAWG TCGA_RNA-Seq UACA-PHF20 UACA chr15 70695017 - PHF20 chr20 35847350 + Exonic hg38 SKCM TCGA-D3-A3CC-06A 1 5 Out-of-frame Inter-chr q23 q11.22 Transcription factor 102723 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO10-FAM134B MYO10 chr5 16935788 - FAM134B chr5 16572102 - Exonic hg38 SKCM TCGA-D3-A3CC-06A 1 4 Out-of-frame Intra-chr p15.1 102724 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC26A11-RPTOR SLC26A11 chr17 80220496 + RPTOR chr17 80707841 + Exonic hg38 SKCM TCGA-D3-A3CE-06A 5 7 5'UTR-CDS Intra-chr q25.3 q25.3 Seq+ 102725 ChimerSeq TCGA FAWG TCGA_RNA-Seq LBH-FLT4 LBH chr2 30234507 + FLT4 chr5 180631778 - Exonic hg38 SKCM TCGA-D3-A3CF-06A 56 262 Out-of-frame Inter-chr p23.1 q35.3 TK:VEGFR Oncogene Seq+ 102726 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLIP4-TMEM18 CLIP4 chr2 29121521 + TMEM18 chr2 675630 - Exonic hg38 SKCM TCGA-D3-A3CF-06A 24 164 Out-of-frame Intra-chr p23.2 p25.3 Seq+ 102727 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITSN2-MYO10 ITSN2 chr2 24360304 - MYO10 chr5 16818167 - Exonic hg38 SKCM TCGA-D3-A3CF-06A 11 44 5'UTR-CDS Inter-chr p23.3 p15.1 Seq+ 102728 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNTG2-RBKS SNTG2 chr2 1316375 + RBKS chr2 27832777 - Exonic hg38 SKCM TCGA-D3-A3CF-06A 12 33 3'UTR-CDS Intra-chr p23.2 Seq+ 102729 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL7-FOSL2 FBXL7 chr5 15500713 + FOSL2 chr2 28404107 + Exonic hg38 SKCM TCGA-D3-A3CF-06A 5 27 Out-of-frame Inter-chr p15.1 p23.2 Transcription factor Seq+ 102730 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM228B-SNTG2 FAM228B chr2 24135187 + SNTG2 chr2 1308494 + Exonic hg38 SKCM TCGA-D3-A3CF-06A 4 28 CDS-3'UTR Intra-chr p23.3 Seq+ 102731 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA1-GUSBP1 NCOA1 chr2 24683128 + GUSBP1 chr5 21585530 + Exonic hg38 SKCM TCGA-D3-A3CF-06A 6 20 CDS-3'UTR Inter-chr p23.3 Oncogene Transcription factor p14.3 Seq+ 102732 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITSN2-KIDINS220 ITSN2 chr2 24275713 - KIDINS220 chr2 8786357 - Exonic hg38 SKCM TCGA-D3-A3CF-06A 4 24 In-Frame Intra-chr p23.3 p25.1 Seq+ 102733 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLOD1-FBXL7 PLOD1 chr1 11965593 + FBXL7 chr5 15615983 + Exonic hg38 SKCM TCGA-D3-A3CF-06A 3 16 Out-of-frame Inter-chr p36.22 p15.1 Seq+ 102734 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBKS-FAM228B RBKS chr2 27827567 - FAM228B chr2 24164198 + Exonic hg38 SKCM TCGA-D3-A3CF-06A 3 4 Out-of-frame Intra-chr p23.2 p23.3 102735 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKT3-CDC14A AKT3 chr1 243843125 - CDC14A chr1 100390732 + Exonic hg38 SKCM TCGA-D3-A3ML-06A 10 24 5'UTR-5'UTR Intra-chr AGC:Akt Oncogene p21.2 Seq+ 102736 ChimerSeq TCGA FAWG TCGA_RNA-Seq MINOS1-DENND2C MINOS1 chr1 19597109 + DENND2C chr1 114587952 - Exonic hg38 SKCM TCGA-D3-A3MO-06A 76 224 Out-of-frame Intra-chr p36.13 p13.2 Seq+ 102737 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHDDS-FAAHP1 DHDDS chr1 26433008 + FAAHP1 chr1 46482210 + Exonic hg38 SKCM TCGA-D3-A3MO-06A 41 273 CDS-3'UTR Intra-chr p36.11 p33 102738 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFAT5-DENND2C NFAT5 chr16 69566374 + DENND2C chr1 114587952 - Exonic hg38 SKCM TCGA-D3-A3MO-06A 13 70 In-Frame Inter-chr q22.1 Transcription factor p13.2 Seq+ 102739 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP12-RALGPS1 LRP12 chr8 104588819 - RALGPS1 chr9 126962225 + Exonic hg38 SKCM TCGA-D3-A3MO-06A 4 28 CDS-5'UTR Inter-chr q22.3 q33.3 Seq+ 102740 ChimerSeq TCGA FAWG TCGA_RNA-Seq C9orf3-VCAN C9orf3 chr9 94979427 + VCAN chr5 83572416 + Exonic hg38 SKCM TCGA-D3-A3MO-06A 1 16 Out-of-frame Inter-chr q22.32 q14.2 102741 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPAT4-LY6H GPAT4 chr8 41584917 + LY6H chr8 143159709 - Exonic hg38 SKCM TCGA-D3-A3MO-06A 2 7 5'UTR-5'UTR Intra-chr p11.21 102742 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC9-PLEKHA2 TRAPPC9 chr8 140023937 - PLEKHA2 chr8 38935994 + Exonic hg38 SKCM TCGA-D3-A3MO-06A 1 2 Out-of-frame Intra-chr q24.3 p11.22 102743 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALG14-HACD1 ALG14 chr1 95041493 - HACD1 chr10 17599411 - Exonic hg38 SKCM TCGA-D3-A3MR-06A 1 24 3'UTR-CDS Inter-chr p21.3 p12.33 102744 ChimerSeq TCGA FAWG TCGA_RNA-Seq RCC1-RPL22 RCC1 chr1 28508160 + RPL22 chr1 6197756 - Exonic hg38 SKCM TCGA-D3-A3MV-06A 1 1 5'UTR-CDS Intra-chr p35.3 p36.31 Seq+ 102745 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFASC-CCNDBP1 NFASC chr1 204828782 + CCNDBP1 chr15 43189199 + Exonic hg38 SKCM TCGA-D3-A51E-06A 8 42 5'UTR-5'UTR Inter-chr q32.1 q15.2 Tumor suppressor gene Seq+ 102746 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT2-RGS7 GALNT2 chr1 230067406 + RGS7 chr1 240983129 - Exonic hg38 SKCM TCGA-D3-A51E-06A 2 9 Out-of-frame Intra-chr q42.13 q43 Seq+ 102747 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNFRSF1B-FBXO6 TNFRSF1B chr1 12167169 + FBXO6 chr1 11673277 + Exonic hg38 SKCM TCGA-D3-A51E-06A 2 1 Out-of-frame Intra-chr p36.22 p36.22 102748 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUMA1-CNTNAP3 NUMA1 chr11 72035902 - CNTNAP3 chr9 39074011 - Exonic hg38 SKCM TCGA-D3-A51E-06A 1 1 Out-of-frame Inter-chr q13.4 Oncogene p12 102749 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP13-KCNMB2 USP13 chr3 179742350 + KCNMB2 chr3 178842653 + Exonic hg38 SKCM TCGA-D3-A51G-06A 310 1059 Out-of-frame Intra-chr q26.33 q26.32 Seq+ 102750 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMYD3-KIF28P SMYD3 chr1 246507054 - KIF28P chr1 246781057 - Exonic hg38 SKCM TCGA-D3-A51G-06A 1 16 Out-of-frame Intra-chr q44 Transcription factor q44 102751 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBOAT1-F13A1 MBOAT1 chr6 20112876 - F13A1 chr6 6224860 - Exonic hg38 SKCM TCGA-D3-A51G-06A 2 4 In-Frame Intra-chr p22.3 p25.1 Seq+ 102752 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM117-KCNC2 TMEM117 chr12 43844928 + KCNC2 chr12 75051317 - Exonic hg38 SKCM TCGA-D3-A51H-06A 50 152 Out-of-frame Intra-chr q12 q21.1 Seq+ 102753 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLIP1-RSRC2 CLIP1 chr12 122422521 - RSRC2 chr12 122508447 - Exonic hg38 SKCM TCGA-D3-A51H-06A 5 15 5'UTR-CDS Intra-chr q24.31 q24.31 Seq+ 102754 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSRP2-NAV3 CSRP2 chr12 76878938 - NAV3 chr12 77940319 + Exonic hg38 SKCM TCGA-D3-A51H-06A 1 4 3'UTR-CDS Intra-chr q21.2 q21.2 102755 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLK-HSD17B4 POLK chr5 75552591 + HSD17B4 chr5 119456315 + Exonic hg38 SKCM TCGA-D3-A51N-06A 36 252 Out-of-frame Intra-chr q13.3 q23.1 Seq+ 102756 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXW11-TTC33 FBXW11 chr5 172006458 - TTC33 chr5 40513069 - Exonic hg38 SKCM TCGA-D3-A51N-06A 30 110 CDS-3'UTR Intra-chr q35.1 p13.1 102757 ChimerSeq TCGA FAWG TCGA_RNA-Seq G3BP1-PDE4D G3BP1 chr5 151791062 + PDE4D chr5 59988717 - Exonic hg38 SKCM TCGA-D3-A51N-06A 20 83 In-Frame Intra-chr q33.1 q12.1 Seq+ 102758 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCCC2-NNT MCCC2 chr5 71604468 + NNT chr5 43675511 + Exonic hg38 SKCM TCGA-D3-A51N-06A 12 42 In-Frame Intra-chr q13.2 p12 Seq+ 102759 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK32A-SPINK5 STK32A chr5 147239686 + SPINK5 chr5 148070323 + Exonic hg38 SKCM TCGA-D3-A51N-06A 5 19 Out-of-frame Intra-chr q32 q32 Seq+ 102760 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRFBP1-MGC32805 SRFBP1 chr5 121962068 + MGC32805 chr5 122454509 - Exonic hg38 SKCM TCGA-D3-A51N-06A 4 14 CDS-3'UTR Intra-chr q23.1 q23.2 102761 ChimerSeq TCGA FAWG TCGA_RNA-Seq SREK1IP1-CCDC112 SREK1IP1 chr5 64764975 - CCDC112 chr5 115277054 - Exonic hg38 SKCM TCGA-D3-A51N-06A 3 16 Out-of-frame Intra-chr q12.3 q22.3 Seq+ 102762 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPINK5-DNAJC21 SPINK5 chr5 148125850 + DNAJC21 chr5 34945761 + Exonic hg38 SKCM TCGA-D3-A51N-06A 2 19 In-Frame Intra-chr q32 p13.2 Seq+ 102763 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM114A2-FBN2 FAM114A2 chr5 154033791 - FBN2 chr5 128273968 - Exonic hg38 SKCM TCGA-D3-A51N-06A 2 14 In-Frame Intra-chr q33.2 q23.3 Seq+ 102764 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM161B-CTNND2 TMEM161B chr5 88268721 - CTNND2 chr5 11117567 - Exonic hg38 SKCM TCGA-D3-A51N-06A 1 18 Out-of-frame Intra-chr q14.3 p15.2 Seq+ 102765 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP3B1-IPO11 AP3B1 chr5 78294452 - IPO11 chr5 62467131 + Exonic hg38 SKCM TCGA-D3-A51N-06A 2 7 Out-of-frame Intra-chr q14.1 q12.1 Seq+ 102766 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARL15-STK32A ARL15 chr5 54171784 - STK32A chr5 147323898 + Exonic hg38 SKCM TCGA-D3-A51N-06A 1 4 Out-of-frame Intra-chr q11.2 q32 102767 ChimerSeq TCGA FAWG TCGA_RNA-Seq FMN1-AVEN FMN1 chr15 32798804 - AVEN chr15 33875995 - Exonic hg38 SKCM TCGA-D3-A5GL-06A 17 65 5'UTR-CDS Intra-chr q14 Seq+ 102768 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKS1B-ERP29 ANKS1B chr12 98773042 - ERP29 chr12 112019756 + Exonic hg38 SKCM TCGA-D3-A5GL-06A 2 18 In-Frame Intra-chr q23.1 q24.13 Seq+ 102769 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP18-YWHAH USP18 chr22 18150223 + YWHAH chr22 31956140 + Exonic hg38 SKCM TCGA-D3-A5GN-06A 6 9 Out-of-frame Intra-chr q11.21 q12.3 Seq+ 102770 ChimerSeq TCGA FAWG TCGA_RNA-Seq TDRD3-CUL4A TDRD3 chr13 60397405 + CUL4A chr13 113253082 + Exonic hg38 SKCM TCGA-D3-A5GR-06A 354 973 Out-of-frame Intra-chr q21.2 q34 Seq+ 102771 ChimerSeq TCGA FAWG TCGA_RNA-Seq KATNAL1-CUL4A KATNAL1 chr13 30283616 - CUL4A chr13 113253082 + Exonic hg38 SKCM TCGA-D3-A5GR-06A 97 447 In-Frame Intra-chr q12.3 q34 Seq+ 102772 ChimerSeq TCGA FAWG TCGA_RNA-Seq KATNAL1-UBE2L5P KATNAL1 chr13 30283616 - UBE2L5P chr13 30426725 + Exonic hg38 SKCM TCGA-D3-A5GR-06A 45 231 Out-of-frame Intra-chr q12.3 q12.3 102773 ChimerSeq TCGA FAWG TCGA_RNA-Seq WARS2-NTNG1 WARS2 chr1 119076350 - NTNG1 chr1 107480611 + Exonic hg38 SKCM TCGA-D3-A5GS-06A 5 33 Out-of-frame Intra-chr p12 p13.3 Seq+ 102774 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH2-REG4 NOTCH2 chr1 120069334 - REG4 chr1 119803165 - Exonic hg38 SKCM TCGA-D3-A5GU-06A 21 71 In-Frame Intra-chr p12 Oncogene Tumor suppressor gene p12 Seq+ 102775 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUZ12-VANGL1 SUZ12 chr17 31996877 + VANGL1 chr1 115659641 + Exonic hg38 SKCM TCGA-D3-A5GU-06A 1 7 In-Frame Inter-chr q11.2 Tumor suppressor gene p13.1 Seq+ 102776 ChimerSeq TCGA FAWG TCGA_RNA-Seq XRRA1-EMSY XRRA1 chr11 74948928 - EMSY chr11 76463821 + Exonic hg38 SKCM TCGA-D3-A8GB-06A 25 123 5'UTR-CDS Intra-chr q13.4 q13.5 102777 ChimerSeq TCGA FAWG TCGA_RNA-Seq LSM4-GRK2 LSM4 chr19 18323018 - GRK2 chr11 67279200 + Exonic hg38 SKCM TCGA-D3-A8GB-06A 29 43 Out-of-frame Inter-chr p13.11 q13.2 102778 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTSF-RANBP3 CTSF chr11 66568274 - RANBP3 chr19 5921321 - Exonic hg38 SKCM TCGA-D3-A8GB-06A 19 48 In-Frame Inter-chr q13.2 p13.3 Seq+ 102779 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM129B-SNRNP25 FAM129B chr9 127516857 - SNRNP25 chr16 55777 + Exonic hg38 SKCM TCGA-D3-A8GC-06A 6 35 Out-of-frame Inter-chr q34.11 p13.3 Seq+ 102780 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMSS1-AXIN1 CMSS1 chr3 99818043 + AXIN1 chr16 298251 - Exonic hg38 SKCM TCGA-D3-A8GC-06A 2 2 Out-of-frame Inter-chr q12.1 p13.3 Oncogene Tumor suppressor gene 102781 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMNA-NTRK1 LMNA chr1 156130773 + NTRK1 chr1 156874906 + Exonic hg38 SKCM TCGA-D3-A8GE-06A 245 1022 In-Frame Intra-chr q22 q23.1 Oncogene KB Pub Seq+ 102782 ChimerSeq TCGA FAWG TCGA_RNA-Seq AXIN1-NPRL3 AXIN1 chr16 346148 - NPRL3 chr16 119255 - Exonic hg38 SKCM TCGA-D3-A8GI-06A 2 9 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 102783 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTMR3-EMID1 MTMR3 chr22 29883359 + EMID1 chr22 29214926 + Exonic hg38 SKCM TCGA-D3-A8GJ-06A 13 11 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 102784 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBX15-AP4B1 TBX15 chr1 118987591 - AP4B1 chr1 113904793 - Exonic hg38 SKCM TCGA-D3-A8GJ-06A 1 5 CDS-5'UTR Intra-chr p12 Transcription factor p13.2 Seq+ 102785 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAKD-SMAP1 DCAKD chr17 45060888 - SMAP1 chr6 70754980 + Exonic hg38 SKCM TCGA-D3-A8GN-06A 5 31 5'UTR-CDS Inter-chr q21.31 q13 Seq+ 102786 ChimerSeq TCGA FAWG TCGA_RNA-Seq LNPEP-FLT4 LNPEP chr5 96936174 + FLT4 chr5 180621904 - Exonic hg38 SKCM TCGA-D3-A8GN-06A 8 10 In-Frame Intra-chr q15 q35.3 TK:VEGFR Oncogene Seq+ 102787 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM13A-ABCG2 FAM13A chr4 88822976 - ABCG2 chr4 88132635 - Exonic hg38 SKCM TCGA-D3-A8GO-06A 9 16 In-Frame Intra-chr q22.1 q22.1 Tumor suppressor gene Seq+ 102788 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK1-PRAMENP MAPK1 chr22 21799012 - PRAMENP chr22 22026327 - Exonic hg38 SKCM TCGA-D3-A8GR-06A 1 8 CDS-3'UTR Intra-chr q11.22 Oncogene q11.22 102789 ChimerSeq TCGA FAWG TCGA_RNA-Seq TACC3-TMEM129 TACC3 chr4 1737702 + TMEM129 chr4 1718626 - Exonic hg38 SKCM TCGA-D3-A8GR-06A 1 5 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 102790 ChimerSeq TCGA FAWG TCGA_RNA-Seq YWHAG-OPA3 YWHAG chr7 76358722 - OPA3 chr19 45553911 - Exonic hg38 SKCM TCGA-D9-A149-06A 24 66 Out-of-frame Inter-chr q11.23 q13.32 Seq+ 102791 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB2-VMP1 GRB2 chr17 75393551 - VMP1 chr17 59764971 + Exonic hg38 SKCM TCGA-D9-A1JW-06A 9 54 In-Frame Intra-chr q25.1 q23.1 Seq+ 102792 ChimerSeq TCGA FAWG TCGA_RNA-Seq FMN1-TRPM1 FMN1 chr15 33008014 - TRPM1 chr15 31061514 - Exonic hg38 SKCM TCGA-D9-A1JX-06A 91 561 5'UTR-5'UTR Intra-chr q13.3 Seq+ 102793 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF280B-BPIFC ZNF280B chr22 22507810 - BPIFC chr22 32447340 - Exonic hg38 SKCM TCGA-D9-A1JX-06A 8 39 5'UTR-CDS Intra-chr Transcription factor q12.3 Seq+ 102794 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKL1-FAM19A5 MKL1 chr22 40636478 - FAM19A5 chr22 48646597 + Exonic hg38 SKCM TCGA-D9-A1JX-06A 10 0 Out-of-frame Intra-chr q13.2 q13.32 Seq+ 102795 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEX26-RTCB PEX26 chr22 18085258 + RTCB chr22 32388099 - Exonic hg38 SKCM TCGA-D9-A1JX-06A 2 27 Out-of-frame Intra-chr q11.21 q12.3 102796 ChimerSeq TCGA FAWG TCGA_RNA-Seq THOC5-ISX THOC5 chr22 29528078 - ISX chr22 35066752 + Exonic hg38 SKCM TCGA-D9-A1JX-06A 5 5 CDS-5'UTR Intra-chr q12.2 q12.3 Transcription factor Seq+ 102797 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK2-SENP5 PAK2 chr3 196782833 + SENP5 chr3 196899666 + Exonic hg38 SKCM TCGA-D9-A1JX-06A 1 15 In-Frame Intra-chr q29 STE:STE20 q29 102798 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM193A-FGFR3 FAM193A chr4 2537170 + FGFR3 chr4 1801620 + Exonic hg38 SKCM TCGA-D9-A1X3-06A 65 22 In-Frame Intra-chr p16.3 p16.3 TK:FGFR Oncogene 102799 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT2-YEATS4 CNOT2 chr12 70342307 + YEATS4 chr12 69362788 + Exonic hg38 SKCM TCGA-D9-A1X3-06A 6 15 In-Frame Intra-chr q15 q15 Seq+ 102800 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAND1-DYRK2 CAND1 chr12 67299095 + DYRK2 chr12 67657106 + Exonic hg38 SKCM TCGA-D9-A1X3-06A 5 12 Out-of-frame Intra-chr q14.3 q15 CMGC:DYRK Seq+ 102801 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLNK-WDR70 CLNK chr4 10540494 - WDR70 chr5 37437922 + Exonic hg38 SKCM TCGA-D9-A1X3-06A 5 10 Out-of-frame Inter-chr p16.1 p13.2 Seq+ 102802 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIO-CLNK TRIO chr5 14401064 + CLNK chr4 10584955 - Exonic hg38 SKCM TCGA-D9-A1X3-06A 5 3 Out-of-frame Inter-chr p15.2 p16.1 Seq+ 102803 ChimerSeq TCGA FAWG TCGA_RNA-Seq VAV2-CLNK VAV2 chr9 133992075 - CLNK chr4 10598049 - Exonic hg38 SKCM TCGA-D9-A1X3-06A 1 3 Out-of-frame Inter-chr q34.2 p16.1 102804 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJA4-CLIC4 DNAJA4 chr15 78264393 + CLIC4 chr1 24797742 + Exonic hg38 SKCM TCGA-D9-A1X3-06A 1 2 Out-of-frame Inter-chr q25.1 p36.11 102805 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARAP3-DIAPH1 ARAP3 chr5 141679545 - DIAPH1 chr5 141534433 - Exonic hg38 SKCM TCGA-D9-A3Z1-06A 2 2 Out-of-frame Intra-chr q31.3 q31.3 102806 ChimerSeq TCGA FAWG TCGA_RNA-Seq NADSYN1-PPP6R3 NADSYN1 chr11 71478469 + PPP6R3 chr11 68554145 + Exonic hg38 SKCM TCGA-D9-A3Z3-06A 8 25 In-Frame Intra-chr q13.4 q13.2 Seq+ 102807 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF121-MRPL21 RNF121 chr11 71960891 + MRPL21 chr11 68900605 - Exonic hg38 SKCM TCGA-D9-A3Z3-06A 5 20 Out-of-frame Intra-chr q13.4 q13.3 Seq+ 102808 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHKA-NADSYN1 CHKA chr11 68068879 - NADSYN1 chr11 71480755 + Exonic hg38 SKCM TCGA-D9-A3Z3-06A 1 28 Out-of-frame Intra-chr q13.2 q13.4 Seq+ 102809 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTGDS-NOC4L PTGDS chr9 136977692 + NOC4L chr12 132150981 + Exonic hg38 SKCM TCGA-D9-A3Z3-06A 1 1 Out-of-frame Inter-chr q34.3 q24.33 Seq+ 102810 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP72-TAS2R1 CEP72 chr5 620261 + TAS2R1 chr5 9629992 - Exonic hg38 SKCM TCGA-D9-A4Z2-01A 4 49 In-Frame Intra-chr p15.31 Seq+ 102811 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKI-CA6 SKI chr1 2229735 + CA6 chr1 8967659 + Exonic hg38 SKCM TCGA-D9-A4Z2-01A 1 6 Out-of-frame Intra-chr p36.33 Transcription factor p36.23 Seq+ 102812 ChimerSeq TCGA FAWG TCGA_RNA-Seq MORF4L2-CHMP1B2P MORF4L2 chrX 103684681 - CHMP1B2P chrX 80291024 - Exonic hg38 SKCM TCGA-D9-A4Z3-01A 14 85 5'UTR-3'UTR Intra-chr q22.2 q21.1 102813 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSH2-AOC4P SSH2 chr17 29848849 - AOC4P chr17 42868578 + Exonic hg38 SKCM TCGA-D9-A4Z3-01A 8 74 CDS-5'UTR Intra-chr q11.2 q21.31 Seq+ 102814 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANC2-TBC1D3G TANC2 chr17 63319090 + TBC1D3G chr17 36328498 + Exonic hg38 SKCM TCGA-D9-A4Z3-01A 3 25 CDS-5'UTR Intra-chr q23.2 q12 Seq+ 102815 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3GL2-FREM1 SH3GL2 chr9 17579287 + FREM1 chr9 14750276 - Exonic hg38 SKCM TCGA-D9-A4Z3-01A 2 4 Out-of-frame Intra-chr p22.2 p22.3 Seq+ 102816 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC35F2-PIWIL4 SLC35F2 chr11 107858658 - PIWIL4 chr11 94607439 + Exonic hg38 SKCM TCGA-D9-A4Z3-01A 1 6 Out-of-frame Intra-chr q22.3 q21 Seq+ 102817 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBR5-RIMS4 UBR5 chr8 102293605 - RIMS4 chr20 44771416 - Exonic hg38 SKCM TCGA-D9-A4Z3-01A 1 5 Out-of-frame Inter-chr q22.3 Oncogene q13.12 Seq+ 102818 ChimerSeq TCGA FAWG TCGA_RNA-Seq GS1-TECPR2 GS1 chrX 14244509 + TECPR2 chr14 102496976 + Exonic hg38 SKCM TCGA-D9-A4Z5-01A 12 23 Out-of-frame Inter-chr q32.31 102819 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL17D-IFT88 IL17D chr13 20704291 + IFT88 chr13 20625750 + Exonic hg38 SKCM TCGA-D9-A4Z5-01A 4 14 In-Frame Intra-chr q12.11 q12.11 Tumor suppressor gene Seq+ 102820 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM19A5-SYNE3 FAM19A5 chr22 48646746 + SYNE3 chr14 95440075 - Exonic hg38 SKCM TCGA-D9-A4Z5-01A 5 8 Out-of-frame Inter-chr q13.32 q32.13 Seq+ 102821 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCA2-BHMG1 SMARCA2 chr9 2123937 + BHMG1 chr19 45735377 + Exonic hg38 SKCM TCGA-D9-A4Z5-01A 3 5 CDS-5'UTR Inter-chr p24.3 Tumor suppressor gene q13.32 102822 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAB1-STEAP3 NAB1 chr2 190649360 + STEAP3 chr2 119263057 + Exonic hg38 SKCM TCGA-D9-A4Z5-01A 2 7 5'UTR-CDS Intra-chr q32.2 q14.2 Seq+ 102823 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNIH2-MS4A4A CNIH2 chr11 66278537 + MS4A4A chr11 60292225 + Exonic hg38 SKCM TCGA-D9-A4Z5-01A 1 9 Out-of-frame Intra-chr q13.2 q12.2 Seq+ 102824 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM102B-TRAPPC8 FAM102B chr1 108606252 + TRAPPC8 chr18 31839457 - Exonic hg38 SKCM TCGA-D9-A4Z5-01A 1 6 In-Frame Inter-chr p13.3 q12.1 Seq+ 102825 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM38A-CHERP TMEM38A chr19 16661341 + CHERP chr19 16535636 - Exonic hg38 SKCM TCGA-D9-A4Z5-01A 1 6 In-Frame Intra-chr p13.11 p13.11 102826 ChimerSeq TCGA FAWG TCGA_RNA-Seq NTNG1-CALN1 NTNG1 chr1 107148839 + CALN1 chr7 71787902 - Exonic hg38 SKCM TCGA-D9-A4Z5-01A 1 3 Out-of-frame Inter-chr p13.3 q11.22 Seq+ 102827 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF12-TPM1 TCF12 chr15 56921098 + TPM1 chr15 63044027 + Exonic hg38 SKCM TCGA-D9-A4Z5-01A 1 2 Out-of-frame Intra-chr q21.3 Oncogene Transcription factor q22.2 102828 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2E3-TECPR2 UBE2E3 chr2 180984090 + TECPR2 chr14 102496976 + Exonic hg38 SKCM TCGA-D9-A4Z5-01A 1000 1000 Out-of-frame Inter-chr q31.3 q32.31 Seq+ 102829 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM126A-TRA2A FAM126A chr7 22983944 - TRA2A chr7 23507535 - Exonic hg38 SKCM TCGA-D9-A4Z6-06A 20 67 In-Frame Intra-chr p15.3 p15.3 Seq+ 102830 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPRIP-RAF1 MPRIP chr17 17180088 + RAF1 chr3 12600415 - Exonic hg38 SKCM TCGA-D9-A4Z6-06A 6 49 In-Frame Inter-chr p11.2 p25.2 TKL:RAF Oncogene 102831 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZCRB1-LIMA1 ZCRB1 chr12 42324019 - LIMA1 chr12 50222485 - Exonic hg38 SKCM TCGA-D9-A6E9-06A 18 64 In-Frame Intra-chr q12 q13.12 Tumor suppressor gene Seq+ 102832 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCBP3-ATP2A3 NCBP3 chr17 3814322 - ATP2A3 chr17 3953710 - Exonic hg38 SKCM TCGA-D9-A6E9-06A 4 5 In-Frame Intra-chr p13.2 p13.2 102833 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAP30BP-PPY SAP30BP chr17 75671863 + PPY chr17 43941654 - Exonic hg38 SKCM TCGA-D9-A6E9-06A 1 3 In-Frame Intra-chr q25.1 q21.31 102834 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF101-NDUFA13 ZNF101 chr19 19668966 + NDUFA13 chr19 19526182 + Exonic hg38 SKCM TCGA-D9-A6EA-06A 2 19 Out-of-frame Intra-chr p13.11 Transcription factor p13.11 Seq+ 102835 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXNA1-TNK2 PLXNA1 chr3 126991566 + TNK2 chr3 195888606 - Exonic hg38 SKCM TCGA-D9-A6EA-06A 1 3 In-Frame Intra-chr q21.3 q29 Oncogene 102836 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL5-CTBP1 OSBPL5 chr11 3165216 - CTBP1 chr4 1241519 - Exonic hg38 SKCM TCGA-D9-A6EA-06A 1 2 5'UTR-5'UTR Inter-chr p15.4 p16.3 102837 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROBO1-THAP4 ROBO1 chr3 78714392 - THAP4 chr2 241606477 - Exonic hg38 SKCM TCGA-D9-A6EC-06A 53 212 Out-of-frame Inter-chr p12.3 Tumor suppressor gene q37.3 Transcription factor Seq+ 102838 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC11A-VPS33B SEC11A chr15 84716025 - VPS33B chr15 91003131 - Exonic hg38 SKCM TCGA-DA-A1HW-06A 126 632 Out-of-frame Intra-chr q25.3 q26.1 Seq+ 102839 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTY2D1-SERGEF SPTY2D1 chr11 18634198 - SERGEF chr11 17788413 - Exonic hg38 SKCM TCGA-DA-A1HW-06A 20 117 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 102840 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE8A-SLCO3A1 PDE8A chr15 84982348 + SLCO3A1 chr15 92094881 + Exonic hg38 SKCM TCGA-DA-A1HW-06A 13 24 Out-of-frame Intra-chr q25.3 q26.1 Seq+ 102841 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERGEF-KCNC1 SERGEF chr11 17959470 - KCNC1 chr11 17771665 + Exonic hg38 SKCM TCGA-DA-A1HW-06A 6 12 In-Frame Intra-chr p15.1 p15.1 Seq+ 102842 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAALADL2-VPS13C NAALADL2 chr3 174441032 + VPS13C chr15 62013992 - Exonic hg38 SKCM TCGA-DA-A1HW-06A 3 17 5'UTR-CDS Inter-chr q26.31 q22.2 Seq+ 102843 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL19-ZNF720 FBXL19 chr16 30930584 + ZNF720 chr16 31792630 + Exonic hg38 SKCM TCGA-DA-A1HW-06A 4 10 CDS-3'UTR Intra-chr p11.2 Transcription factor p11.2 Seq+ 102844 ChimerSeq TCGA FAWG TCGA_RNA-Seq BDH2-MANBA BDH2 chr4 103099783 - MANBA chr4 102674070 - Exonic hg38 SKCM TCGA-DA-A1HW-06A 4 4 5'UTR-CDS Intra-chr q24 q24 102845 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC18-HDAC9 TNRC18 chr7 5361897 - HDAC9 chr7 18325512 + Exonic hg38 SKCM TCGA-DA-A1HW-06A 2 11 CDS-5'UTR Intra-chr p22.1 p21.1 Seq+ 102846 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCC4-PTPN4 ABCC4 chr13 95301241 - PTPN4 chr2 119926598 + Exonic hg38 SKCM TCGA-DA-A1HW-06A 2 9 In-Frame Inter-chr q32.1 q14.2 Seq+ 102847 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMA1-SERGEF PSMA1 chr11 14610966 - SERGEF chr11 17959636 - Exonic hg38 SKCM TCGA-DA-A1HW-06A 3 5 Out-of-frame Intra-chr p15.2 p15.1 Seq+ 102848 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC9-LINGO2 HDAC9 chr7 18585522 + LINGO2 chr9 28476025 - Exonic hg38 SKCM TCGA-DA-A1HW-06A 1 5 CDS-5'UTR Inter-chr p21.1 p21.1 Seq+ 102849 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC42-ALPL CDC42 chr1 22052742 + ALPL chr1 21553978 + Exonic hg38 SKCM TCGA-DA-A1HW-06A 1 4 5'UTR-5'UTR Intra-chr p36.12 p36.12 Tumor suppressor gene 102850 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4K4-MBNL2 MAP4K4 chr2 101698538 + MBNL2 chr13 97391322 + Exonic hg38 SKCM TCGA-DA-A1HW-06A 1 4 In-Frame Inter-chr q11.2 q32.1 Transcription factor 102851 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUN1-SI SUN1 chr7 843520 + SI chr3 165076012 - Exonic hg38 SKCM TCGA-DA-A1HW-06A 1 4 5'UTR-5'UTR Inter-chr p22.3 q26.1 102852 ChimerSeq TCGA FAWG TCGA_RNA-Seq OLMALINC-CALCOCO2 OLMALINC chr10 100374012 + CALCOCO2 chr17 48848064 + Exonic hg38 SKCM TCGA-DA-A1HY-06A 8 33 5'UTR-5'UTR Inter-chr q24.31 q21.32 102853 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESYT2-NCAPG2 ESYT2 chr7 158759486 - NCAPG2 chr7 158658408 - Exonic hg38 SKCM TCGA-DA-A1I0-06A 13 112 In-Frame Intra-chr q36.3 q36.3 102854 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF136-XAB2 ZNF136 chr19 12163206 + XAB2 chr19 7628298 - Exonic hg38 SKCM TCGA-DA-A1I0-06A 18 46 In-Frame Intra-chr p13.2 Transcription factor p13.2 Seq+ 102855 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF20-TINCR ZNF20 chr19 12140180 - TINCR chr19 5562211 - Exonic hg38 SKCM TCGA-DA-A1I0-06A 11 40 CDS-3'UTR Intra-chr p13.2 Transcription factor p13.3 Seq+ 102856 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF57-NANOS3 ZNF57 chr19 2901048 + NANOS3 chr19 13880442 + Exonic hg38 SKCM TCGA-DA-A1I0-06A 11 34 Out-of-frame Intra-chr p13.3 Transcription factor p13.12 Seq+ 102857 ChimerSeq TCGA FAWG TCGA_RNA-Seq FZR1-MAN2B1 FZR1 chr19 3536976 + MAN2B1 chr19 12657558 - Exonic hg38 SKCM TCGA-DA-A1I0-06A 4 56 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.13 102858 ChimerSeq TCGA FAWG TCGA_RNA-Seq DST-MLIP DST chr6 56506443 - MLIP chr6 54121447 + Exonic hg38 SKCM TCGA-DA-A1I0-06A 9 18 In-Frame Intra-chr p12.1 Oncogene p12.1 Seq+ 102859 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A3-DDX39A SLC39A3 chr19 2737048 - DDX39A chr19 14411598 - Exonic hg38 SKCM TCGA-DA-A1I0-06A 1 32 In-Frame Intra-chr p13.3 p13.12 Seq+ 102860 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP8L-GAS5 AKAP8L chr19 15397150 - GAS5 chr1 173864506 - Exonic hg38 SKCM TCGA-DA-A1I0-06A 1 1 3'UTR-3'UTR Inter-chr p13.12 Transcription factor q25.1 Tumor suppressor gene 102861 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHG1-DTYMK PLEKHG1 chr6 150819774 + DTYMK chr2 241685877 - Exonic hg38 SKCM TCGA-DA-A1I0-06A 1 1 In-Frame Inter-chr q25.1 q37.3 102862 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB12-TWSG1 RAB12 chr18 8609953 + TWSG1 chr18 9337193 + Exonic hg38 SKCM TCGA-DA-A1I4-06A 1 8 CDS-5'UTR Intra-chr p11.22 p11.22 102863 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEURL4-MSI2 NEURL4 chr17 7317788 - MSI2 chr17 57432586 + Exonic hg38 SKCM TCGA-DA-A1I7-06A 22 20 Out-of-frame Intra-chr p13.1 q22 102864 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMYM4-SMYD3 ZMYM4 chr1 35361789 + SMYD3 chr1 245929937 - Exonic hg38 SKCM TCGA-DA-A1I7-06A 5 24 In-Frame Intra-chr p34.3 q44 Transcription factor Seq+ 102865 ChimerSeq TCGA FAWG TCGA_RNA-Seq HAPLN1-EDIL3 HAPLN1 chr5 83720789 - EDIL3 chr5 83943568 - Exonic hg38 SKCM TCGA-DA-A1I7-06A 5 10 5'UTR-CDS Intra-chr q14.3 q14.3 Seq+ 102866 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMYD3-ZMYM4 SMYD3 chr1 246327201 - ZMYM4 chr1 35370029 + Exonic hg38 SKCM TCGA-DA-A1I7-06A 2 16 In-Frame Intra-chr q44 Transcription factor p34.3 Seq+ 102867 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO10-MARCH11 MYO10 chr5 16935788 - 2019_ 3_ 11_ chr5 16177881 - Exonic hg38 SKCM TCGA-DA-A1I7-06A 2 13 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 102868 ChimerSeq TCGA FAWG TCGA_RNA-Seq CERK-KIAA1644 CERK chr22 46720086 - KIAA1644 chr22 44249685 - Exonic hg38 SKCM TCGA-DA-A1I7-06A 3 5 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 102869 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDZD8-ENO4 PDZD8 chr10 117318872 - ENO4 chr10 116855623 + Exonic hg38 SKCM TCGA-DA-A1I8-06A 21 62 In-Frame Intra-chr q26.11 q25.3 Seq+ 102870 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM104A-SLC39A11 FAM104A chr17 73232086 - SLC39A11 chr17 73088775 - Exonic hg38 SKCM TCGA-DA-A1I8-06A 2 24 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 102871 ChimerSeq TCGA FAWG TCGA_RNA-Seq DUSP22-HDHD5 DUSP22 chr6 311962 + HDHD5 chr22 17149745 - Exonic hg38 SKCM TCGA-DA-A1I8-06A 3 13 In-Frame Inter-chr p25.3 Tumor suppressor gene q11.1 102872 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRFIP1-DBF4B LRRFIP1 chr2 237627740 + DBF4B chr17 44722880 + Exonic hg38 SKCM TCGA-DA-A1IA-06A 9 25 Out-of-frame Inter-chr q37.3 q21.31 Seq+ 102873 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGK-BRAF AGK chr7 141555567 + BRAF chr7 140794467 - Exonic hg38 SKCM TCGA-DA-A1IA-06A 1 4 3'UTR-3'UTR Intra-chr q34 TKL:RAF Oncogene KB Pub Seq+ 102874 ChimerSeq TCGA FAWG TCGA_RNA-Seq PFDN2-RXRG PFDN2 chr1 161117952 - RXRG chr1 165428966 - Exonic hg38 SKCM TCGA-DA-A1IA-06A 1 3 Out-of-frame Intra-chr q23.3 q23.3 Transcription factor 102875 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMBR1L-SSU72 LMBR1L chr12 49101250 - SSU72 chr1 1545002 - Exonic hg38 SKCM TCGA-DA-A1IA-06A 1 1 In-Frame Inter-chr q13.12 p36.33 102876 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC21-PHGDH ZDHHC21 chr9 14639896 - PHGDH chr1 119734634 + Exonic hg38 SKCM TCGA-DA-A3F3-06A 26 115 In-Frame Inter-chr p22.3 p12 Seq+ 102877 ChimerSeq TCGA FAWG TCGA_RNA-Seq RECK-ACER3 RECK chr9 36052323 + ACER3 chr11 76976289 + Exonic hg38 SKCM TCGA-DA-A3F3-06A 10 71 In-Frame Inter-chr p13.3 Tumor suppressor gene q13.5 Seq+ 102878 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL4A3BP-ELOVL7 COL4A3BP chr5 75505982 - ELOVL7 chr5 60787431 - Exonic hg38 SKCM TCGA-DA-A3F3-06A 19 28 CDS-5'UTR Intra-chr q13.3 q12.1 Seq+ 102879 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLPB-KIAA2026 CLPB chr11 72430312 - KIAA2026 chr9 5881675 - Exonic hg38 SKCM TCGA-DA-A3F3-06A 14 32 CDS-3'UTR Inter-chr q13.4 p24.1 102880 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFS4-HMGCR NDUFS4 chr5 53658624 + HMGCR chr5 75342583 + Exonic hg38 SKCM TCGA-DA-A3F3-06A 5 26 5'UTR-5'UTR Intra-chr q11.2 q13.3 Seq+ 102881 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-TSKU PPFIA1 chr11 70356254 + TSKU chr11 76795609 + Exonic hg38 SKCM TCGA-DA-A3F3-06A 2 12 Out-of-frame Intra-chr q13.3 q13.5 Seq+ 102882 ChimerSeq TCGA FAWG TCGA_RNA-Seq ISL2-PEAK1 ISL2 chr15 76336941 + PEAK1 chr15 77182040 - Exonic hg38 SKCM TCGA-DA-A3F5-06A 11 83 CDS-5'UTR Intra-chr q24.3 Transcription factor q24.3 Seq+ 102883 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEAK1-PSTPIP1 PEAK1 chr15 77178790 - PSTPIP1 chr15 77025284 + Exonic hg38 SKCM TCGA-DA-A3F5-06A 12 59 In-Frame Intra-chr q24.3 q24.3 Seq+ 102884 ChimerSeq TCGA FAWG TCGA_RNA-Seq RUNX1-IFNAR1 RUNX1 chr21 34834410 - IFNAR1 chr21 33352758 + Exonic hg38 SKCM TCGA-DA-A3F5-06A 2 33 Out-of-frame Intra-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q22.11 Seq+ 102885 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPTN-HMG20A NPTN chr15 73633125 - HMG20A chr15 77458404 + Exonic hg38 SKCM TCGA-DA-A3F5-06A 4 16 CDS-5'UTR Intra-chr q24.1 q24.3 Transcription factor Seq+ 102886 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRCAM-SEM1 NRCAM chr7 108456243 - SEM1 chr7 96694891 - Exonic hg38 SKCM TCGA-DA-A3F5-06A 3 10 5'UTR-5'UTR Intra-chr q31.1 Tumor suppressor gene q21.3 102887 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETFA-IMP3 ETFA chr15 76274412 - IMP3 chr15 75640268 - Exonic hg38 SKCM TCGA-DA-A3F5-06A 2 7 CDS-5'UTR Intra-chr q24.3 q24.2 102888 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM168A-MYEOV FAM168A chr11 73597923 - MYEOV chr11 69341510 + Exonic hg38 SKCM TCGA-DA-A95V-06A 7 54 5'UTR-3'UTR Intra-chr q13.4 q13.3 Seq+ 102889 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUMA1-C2CD3 NUMA1 chr11 72069842 - C2CD3 chr11 74013525 - Exonic hg38 SKCM TCGA-DA-A95V-06A 6 54 5'UTR-CDS Intra-chr q13.4 Oncogene q13.4 Seq+ 102890 ChimerSeq TCGA FAWG TCGA_RNA-Seq C7orf57-SUGCT C7orf57 chr7 48049977 + SUGCT chr7 40496284 + Exonic hg38 SKCM TCGA-DA-A95V-06A 1 6 In-Frame Intra-chr p12.3 p14.1 102891 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF682-CRLF1 ZNF682 chr19 20039343 - CRLF1 chr19 18599846 - Exonic hg38 SKCM TCGA-DA-A95V-06A 1 3 Out-of-frame Intra-chr p12 Transcription factor p13.11 102892 ChimerSeq TCGA FAWG TCGA_RNA-Seq FMN1-SNAP23 FMN1 chr15 32964107 - SNAP23 chr15 42511833 + Exonic hg38 SKCM TCGA-DA-A95W-06A 1 46 5'UTR-5'UTR Intra-chr q15.1 102893 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2AK3-NBAS EIF2AK3 chr2 88626967 - NBAS chr2 15427794 - Exonic hg38 SKCM TCGA-DA-A95Y-06A 16 63 In-Frame Intra-chr p11.2 p24.3 Seq+ 102894 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF144A-MSH2 RNF144A chr2 6941147 + MSH2 chr2 47408401 + Exonic hg38 SKCM TCGA-DA-A95Y-06A 8 21 5'UTR-CDS Intra-chr p25.1 Tumor suppressor gene p21 Oncogene Tumor suppressor gene Seq+ 102895 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL21-GDPD4 MRPL21 chr11 68892890 - GDPD4 chr11 77287420 - Exonic hg38 SKCM TCGA-DA-A95Y-06A 6 3 CDS-5'UTR Intra-chr q13.3 q13.5 102896 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID2-C12orf56 ARID2 chr12 45731314 + C12orf56 chr12 64353056 - Exonic hg38 SKCM TCGA-DA-A95Y-06A 2 13 Out-of-frame Intra-chr q12 Oncogene Tumor suppressor gene Transcription factor q14.2 Seq+ 102897 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNASEH1-DYSF RNASEH1 chr2 3552144 - DYSF chr2 71643965 + Exonic hg38 SKCM TCGA-DA-A95Y-06A 2 12 Out-of-frame Intra-chr p25.3 p13.2 Seq+ 102898 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLG1-FBXW8 GLG1 chr16 74472349 - FBXW8 chr12 116945364 + Exonic hg38 SKCM TCGA-EB-A1NK-01A 36 103 In-Frame Inter-chr q23.1 q24.22 Seq+ 102899 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13L-METTL9 MED13L chr12 116237468 - METTL9 chr16 21617865 + Exonic hg38 SKCM TCGA-EB-A1NK-01A 7 58 CDS-5'UTR Inter-chr q24.21 Seq+ 102900 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF821-RMI2 ZNF821 chr16 71879907 - RMI2 chr16 11316141 + Exonic hg38 SKCM TCGA-EB-A1NK-01A 1 7 5'UTR-5'UTR Intra-chr q22.2 Transcription factor p13.13 102901 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSH1-SART3 SSH1 chr12 108805056 - SART3 chr12 108539089 - Exonic hg38 SKCM TCGA-EB-A1NK-01A 1 2 In-Frame Intra-chr q24.11 q23.3 102902 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTAN1-MAPKAP1 SPTAN1 chr9 128594373 + MAPKAP1 chr9 125506417 - Exonic hg38 SKCM TCGA-EB-A24D-01A 22 138 Out-of-frame Intra-chr q34.11 q33.3 Seq+ 102903 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRG-SYNPR PTPRG chr3 61748982 + SYNPR chr3 63480832 + Exonic hg38 SKCM TCGA-EB-A24D-01A 6 55 Out-of-frame Intra-chr p14.2 p14.2 Seq+ 102904 ChimerSeq TCGA FAWG TCGA_RNA-Seq MVB12B-MED27 MVB12B chr9 126340630 + MED27 chr9 132014467 - Exonic hg38 SKCM TCGA-EB-A24D-01A 1 14 In-Frame Intra-chr q33.3 q34.13 Seq+ 102905 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGA2-GNS HMGA2 chr12 65838569 + GNS chr12 64752757 - Exonic hg38 SKCM TCGA-EB-A3HV-01A 12 39 In-Frame Intra-chr q14.3 Transcription factor q14.3 Seq+ 102906 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC20A2-CORO6 SLC20A2 chr8 42421239 - CORO6 chr17 29616183 - Exonic hg38 SKCM TCGA-EB-A3HV-01A 5 37 Out-of-frame Inter-chr p11.21 q11.2 Seq+ 102907 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDAH-RTN4 LDAH chr2 20739971 - RTN4 chr2 54987698 - Exonic hg38 SKCM TCGA-EB-A3XC-01A 2 26 In-Frame Intra-chr p24.1 p16.1 Tumor suppressor gene 102908 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAP130-BIN1 SAP130 chr2 127977985 - BIN1 chr2 127076706 - Exonic hg38 SKCM TCGA-EB-A3XC-01A 3 4 Out-of-frame Intra-chr q14.3 q14.3 Tumor suppressor gene Seq+ 102909 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM33-ASB17 TRIM33 chr1 114430798 - ASB17 chr1 75919158 - Exonic hg38 SKCM TCGA-EB-A3XE-01A 2 12 In-Frame Intra-chr p13.2 Oncogene p31.1 Seq+ 102910 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSRA-CSGALNACT1 MSRA chr8 10319989 + CSGALNACT1 chr8 19408694 - Exonic hg38 SKCM TCGA-EB-A3XF-01A 7 17 5'UTR-CDS Intra-chr p23.1 p21.3 Seq+ 102911 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTCB-FAM83F RTCB chr22 32406662 - FAM83F chr22 40029516 + Exonic hg38 SKCM TCGA-EB-A3Y6-01A 7 48 In-Frame Intra-chr q12.3 q13.1 102912 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKL1-ARAP1 MKL1 chr22 40594674 - ARAP1 chr11 72707374 - Exonic hg38 SKCM TCGA-EB-A3Y6-01A 1 17 Out-of-frame Inter-chr q13.2 q13.4 Seq+ 102913 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL12-RABGAP1L KLHL12 chr1 202909010 - RABGAP1L chr1 174637375 + Exonic hg38 SKCM TCGA-EB-A3Y6-01A 1 5 Out-of-frame Intra-chr q32.1 q25.1 102914 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD10-CLTCL1 STARD10 chr11 72780975 - CLTCL1 chr22 19275830 - Exonic hg38 SKCM TCGA-EB-A3Y6-01A 1 3 In-Frame Inter-chr q13.4 q11.21 Seq+ 102915 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLTCL1-DGCR8 CLTCL1 chr22 19291600 - DGCR8 chr22 20111386 + Exonic hg38 SKCM TCGA-EB-A3Y6-01A 1000 1000 CDS-3'UTR Intra-chr q11.21 q11.21 102916 ChimerSeq TCGA FAWG TCGA_RNA-Seq DUS2-HSD11B2 DUS2 chr16 68071108 + HSD11B2 chr16 67436249 + Exonic hg38 SKCM TCGA-EB-A3Y7-01A 28 99 Out-of-frame Intra-chr q22.1 q22.1 102917 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP6V0D1-DUS2 ATP6V0D1 chr16 67480957 - DUS2 chr16 68070138 + Exonic hg38 SKCM TCGA-EB-A3Y7-01A 13 135 Out-of-frame Intra-chr q22.1 q22.1 102918 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF578-NRDC ZNF578 chr19 52456958 + NRDC chr1 51789433 - Exonic hg38 SKCM TCGA-EB-A3Y7-01A 1 2 5'UTR-CDS Inter-chr q13.41 Transcription factor p32.3 102919 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPME1-UVRAG PPME1 chr11 74204445 + UVRAG chr11 76004005 + Exonic hg38 SKCM TCGA-EB-A41B-01A 1 9 Out-of-frame Intra-chr q13.4 q13.5 Tumor suppressor gene Seq+ 102920 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRD9-OSMR BRD9 chr5 889021 - OSMR chr5 38903882 + Exonic hg38 SKCM TCGA-EB-A42Y-01A 2 12 Out-of-frame Intra-chr p15.33 p13.1 Seq+ 102921 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYTH3-GRID1 CYTH3 chr7 6272474 - GRID1 chr10 86206648 - Exonic hg38 SKCM TCGA-EB-A42Z-01A 16 76 In-Frame Inter-chr p22.1 q23.2 Seq+ 102922 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBP2-MRPL43 OSBP2 chr22 30741369 + MRPL43 chr10 100983817 - Exonic hg38 SKCM TCGA-EB-A42Z-01A 8 39 In-Frame Inter-chr q12.2 q24.31 Seq+ 102923 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTF1-GANC RTF1 chr15 41475819 + GANC chr15 42287691 + Exonic hg38 SKCM TCGA-EB-A42Z-01A 5 28 In-Frame Intra-chr q15.1 q15.1 Seq+ 102924 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNG7-PLA2G2A GNG7 chr19 2646224 - PLA2G2A chr1 19978879 - Exonic hg38 SKCM TCGA-EB-A42Z-01A 3 31 5'UTR-5'UTR Inter-chr p13.3 p36.13 Tumor suppressor gene Seq+ 102925 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRID1-HECTD2 GRID1 chr10 86363941 - HECTD2 chr10 91425281 + Exonic hg38 SKCM TCGA-EB-A42Z-01A 6 12 Out-of-frame Intra-chr q23.2 q23.32 Seq+ 102926 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP295-METTL4 CEP295 chr11 93675666 + METTL4 chr18 2544759 - Exonic hg38 SKCM TCGA-EB-A42Z-01A 3 22 In-Frame Inter-chr q21 p11.32 102927 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIVEP3-DOT1L HIVEP3 chr1 41628749 - DOT1L chr19 2180713 + Exonic hg38 SKCM TCGA-EB-A42Z-01A 2 16 5'UTR-CDS Inter-chr p34.2 Tumor suppressor gene Transcription factor p13.3 Oncogene Transcription factor Seq+ 102928 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX9-ZBTB37 DHX9 chr1 182860184 + ZBTB37 chr1 173870197 + Exonic hg38 SKCM TCGA-EB-A42Z-01A 3 4 5'UTR-5'UTR Intra-chr q25.3 q25.1 Transcription factor Seq+ 102929 ChimerSeq TCGA FAWG TCGA_RNA-Seq UCHL5-TARS2 UCHL5 chr1 193021097 - TARS2 chr1 150496482 + Exonic hg38 SKCM TCGA-EB-A42Z-01A 1 3 In-Frame Intra-chr q31.2 q21.2 102930 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRM-C19orf25 SRM chr1 11055073 - C19orf25 chr19 1479556 - Exonic hg38 SKCM TCGA-EB-A42Z-01A 1000 1000 Out-of-frame Inter-chr p36.22 TK:Src p13.3 102931 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDR2-FMO4 DDR2 chr1 162655374 + FMO4 chr1 171324138 + Exonic hg38 SKCM TCGA-EB-A430-01A 9 91 5'UTR-CDS Intra-chr q23.3 TK:DDR Oncogene Tumor suppressor gene q24.3 Seq+ 102932 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR1OP-ABCC4 FGFR1OP chr6 167003811 + ABCC4 chr13 95194937 - Exonic hg38 SKCM TCGA-EB-A431-01A 7 26 In-Frame Inter-chr q27 q32.1 Seq+ 102933 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP2-TBC1D22A SRGAP2 chr1 206206037 + TBC1D22A chr22 46792520 + Exonic hg38 SKCM TCGA-EB-A431-01A 2 10 Out-of-frame Inter-chr q32.1 Tumor suppressor gene q13.31 102934 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIT-UGT2B7 KIT chr4 54658081 + UGT2B7 chr4 69089472 + Exonic hg38 SKCM TCGA-EB-A44O-01A 1 21 CDS-5'UTR Intra-chr q12 TK:PDGFR Oncogene q13.2 Seq+ 102935 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4B-SLC25A42 KDM4B chr19 5138070 + SLC25A42 chr19 19096091 + Exonic hg38 SKCM TCGA-EB-A44O-01A 2 9 CDS-5'UTR Intra-chr p13.3 p13.11 Seq+ 102936 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF430-BRD4 ZNF430 chr19 21034184 + BRD4 chr19 15273133 - Exonic hg38 SKCM TCGA-EB-A44O-01A 1 8 CDS-5'UTR Intra-chr Transcription factor p13.12 Atypical:BRD 102937 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIO-ADAMTS12 TRIO chr5 14381252 + ADAMTS12 chr5 33881480 - Exonic hg38 SKCM TCGA-EB-A44Q-06A 15 110 Out-of-frame Intra-chr p15.2 p13.2 Seq+ 102938 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT2-FBXO4 CNOT2 chr12 70243480 + FBXO4 chr5 41929697 + Exonic hg38 SKCM TCGA-EB-A44Q-06A 34 27 5'UTR-CDS Inter-chr q15 p13.1 Seq+ 102939 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM2-PRDM9 R3HDM2 chr12 57430720 - PRDM9 chr5 23493471 + Exonic hg38 SKCM TCGA-EB-A44Q-06A 31 39 5'UTR-5'UTR Inter-chr q13.3 p14.2 Transcription factor Seq+ 102940 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO10-FAM186A MYO10 chr5 16818009 - FAM186A chr12 50356248 - Exonic hg38 SKCM TCGA-EB-A44Q-06A 4 43 Out-of-frame Inter-chr p15.1 q13.12 Seq+ 102941 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM2B-SNRNP35 KDM2B chr12 121532806 - SNRNP35 chr12 123458021 + Exonic hg38 SKCM TCGA-EB-A44Q-06A 5 24 CDS-5'UTR Intra-chr q24.31 Transcription factor q24.31 102942 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK14-SIN3A MAPK14 chr6 36028273 + SIN3A chr15 75430408 - Exonic hg38 SKCM TCGA-EB-A44Q-06A 4 14 5'UTR-5'UTR Inter-chr p21.31 q24.2 Seq+ 102943 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS12-RAI14 ADAMTS12 chr5 33881119 - RAI14 chr5 34757468 + Exonic hg38 SKCM TCGA-EB-A44Q-06A 4 11 In-Frame Intra-chr p13.2 p13.2 Seq+ 102944 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOS1-UBC NOS1 chr12 117285241 - UBC chr12 124913774 - Exonic hg38 SKCM TCGA-EB-A44Q-06A 3 14 CDS-5'UTR Intra-chr q24.22 q24.31 Seq+ 102945 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC16A7-GOLPH3 SLC16A7 chr12 59596236 + GOLPH3 chr5 32135686 - Exonic hg38 SKCM TCGA-EB-A44Q-06A 4 9 5'UTR-CDS Inter-chr q14.1 p13.3 Seq+ 102946 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDHAF4-SH3BGRL2 SDHAF4 chr6 70579566 + SH3BGRL2 chr6 79673614 + Exonic hg38 SKCM TCGA-EB-A44Q-06A 3 9 Out-of-frame Intra-chr q13 q14.1 102947 ChimerSeq TCGA FAWG TCGA_RNA-Seq GABPB1-C15orf52 GABPB1 chr15 50354985 - C15orf52 chr15 40337893 - Exonic hg38 SKCM TCGA-EB-A44Q-06A 1 15 Out-of-frame Intra-chr q21.2 q15.1 Seq+ 102948 ChimerSeq TCGA FAWG TCGA_RNA-Seq MITF-FRMD4B MITF chr3 69739701 + FRMD4B chr3 69432761 - Exonic hg38 SKCM TCGA-EB-A44Q-06A 3 5 5'UTR-5'UTR Intra-chr p13 Oncogene Transcription factor p14.1 Seq+ 102949 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC12A7-LACE1 SLC12A7 chr5 1065283 - LACE1 chr6 108356690 + Exonic hg38 SKCM TCGA-EB-A44Q-06A 1 6 Out-of-frame Inter-chr p15.33 102950 ChimerSeq TCGA FAWG TCGA_RNA-Seq BASP1-C5orf17 BASP1 chr5 17089161 + C5orf17 chr5 24177837 + Exonic hg38 SKCM TCGA-EB-A44R-06A 43 461 5'UTR-5'UTR Intra-chr p15.1 Tumor suppressor gene p14.2 102951 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUB1-ELMO1 SUB1 chr5 32585625 + ELMO1 chr7 37133234 - Exonic hg38 SKCM TCGA-EB-A44R-06A 34 80 5'UTR-CDS Inter-chr p13.3 p14.1 Seq+ 102952 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAAF5-BRAT1 DNAAF5 chr7 729847 + BRAT1 chr7 2547478 - Exonic hg38 SKCM TCGA-EB-A44R-06A 14 62 Out-of-frame Intra-chr p22.3 p22.3 102953 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEK3-GXYLT2 NEK3 chr13 52148415 - GXYLT2 chr3 72957229 + Exonic hg38 SKCM TCGA-EB-A44R-06A 11 46 In-Frame Inter-chr q14.3 Other:NEK p13 Seq+ 102954 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXK1-THSD7A FOXK1 chr7 4741023 + THSD7A chr7 11382616 - Exonic hg38 SKCM TCGA-EB-A44R-06A 4 37 Out-of-frame Intra-chr p22.1 Transcription factor p21.3 Seq+ 102955 ChimerSeq TCGA FAWG TCGA_RNA-Seq NBPF26-PHTF1 NBPF26 chr1 120793496 + PHTF1 chr1 113698387 - Exonic hg38 SKCM TCGA-EB-A44R-06A 5 18 5'UTR-CDS Intra-chr p11.2 p13.2 102956 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRAT1-GUSBP1 BRAT1 chr7 2554305 - GUSBP1 chr5 21459678 + Exonic hg38 SKCM TCGA-EB-A44R-06A 4 17 3'UTR-3'UTR Inter-chr p22.3 p14.3 Seq+ 102957 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA5A-BASP1 SEMA5A chr5 9545584 - BASP1 chr5 17089073 + Exonic hg38 SKCM TCGA-EB-A44R-06A 4 14 5'UTR-5'UTR Intra-chr p15.31 p15.1 Tumor suppressor gene 102958 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICALL2-HDAC9 MICALL2 chr7 1444652 - HDAC9 chr7 18644671 + Exonic hg38 SKCM TCGA-EB-A44R-06A 3 9 Out-of-frame Intra-chr p22.3 p21.1 Seq+ 102959 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLCCI1-DGKB GLCCI1 chr7 7969807 + DGKB chr7 14841450 - Exonic hg38 SKCM TCGA-EB-A44R-06A 2 7 CDS-5'UTR Intra-chr p21.3 p21.2 Seq+ 102960 ChimerSeq TCGA FAWG TCGA_RNA-Seq GXYLT2-NEK3 GXYLT2 chr3 72922335 + NEK3 chr13 52144891 - Exonic hg38 SKCM TCGA-EB-A44R-06A 1 6 In-Frame Inter-chr p13 q14.3 Other:NEK Seq+ 102961 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLAT-C12orf66 PLAT chr8 42207494 - C12orf66 chr12 64215963 - Exonic hg38 SKCM TCGA-EB-A4IQ-01A 25 127 5'UTR-CDS Inter-chr p11.21 q14.2 Seq+ 102962 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROBO1-SEMA5B ROBO1 chr3 78639744 - SEMA5B chr3 122915890 - Exonic hg38 SKCM TCGA-EB-A4IQ-01A 1 11 Out-of-frame Intra-chr p12.3 Tumor suppressor gene q21.1 Seq+ 102963 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPY19L3-GPR68 DPY19L3 chr19 32439910 + GPR68 chr14 91235179 - Exonic hg38 SKCM TCGA-EB-A4IQ-01A 2 6 CDS-5'UTR Inter-chr q13.11 q32.11 Seq+ 102964 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT18-PRDM2 GALNT18 chr11 11621359 - PRDM2 chr1 13816427 + Exonic hg38 SKCM TCGA-EB-A4OY-01A 17 90 In-Frame Inter-chr p15.4 p36.21 Tumor suppressor gene Transcription factor Seq+ 102965 ChimerSeq TCGA FAWG TCGA_RNA-Seq LONRF1-PSMB7 LONRF1 chr8 12754700 - PSMB7 chr9 124384656 - Exonic hg38 SKCM TCGA-EB-A4OY-01A 6 32 5'UTR-CDS Inter-chr p23.1 q33.3 Seq+ 102966 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNN-BCAR4 SNN chr16 11668540 + BCAR4 chr16 11820297 - Exonic hg38 SKCM TCGA-EB-A4OY-01A 5 7 5'UTR-3'UTR Intra-chr p13.13 p13.13 Seq+ 102967 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDK3-NAV3 PDK3 chrX 24505298 + NAV3 chr12 78185601 + Exonic hg38 SKCM TCGA-EB-A4OY-01A 1 18 In-Frame Inter-chr p22.11 q21.2 Seq+ 102968 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST3GAL4-FAT3 ST3GAL4 chr11 126355842 + FAT3 chr11 92831622 + Exonic hg38 SKCM TCGA-EB-A4OY-01A 5 1 5'UTR-CDS Intra-chr q24.2 Seq+ 102969 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSEN1-NT5DC3 PSEN1 chr14 73136583 + NT5DC3 chr12 103771329 - Exonic hg38 SKCM TCGA-EB-A4OY-01A 2 4 5'UTR-3'UTR Inter-chr q24.2 q23.3 102970 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUBP2-P4HB NUBP2 chr16 1783036 + P4HB chr17 81855586 - Exonic hg38 SKCM TCGA-EB-A4OY-01A 1 6 In-Frame Inter-chr p13.3 q25.3 102971 ChimerSeq TCGA FAWG TCGA_RNA-Seq COG3-PSMB7 COG3 chr13 45465210 + PSMB7 chr9 124356915 - Exonic hg38 SKCM TCGA-EB-A4OZ-01A 2 1 In-Frame Inter-chr q14.13 q33.3 Seq+ 102972 ChimerSeq TCGA FAWG TCGA_RNA-Seq C10orf88-PLPP4 C10orf88 chr10 122948649 - PLPP4 chr10 120575131 + Exonic hg38 SKCM TCGA-EB-A4P0-01A 5 35 In-Frame Intra-chr q26.13 q26.12 102973 ChimerSeq TCGA FAWG TCGA_RNA-Seq AIF1L-SYN2 AIF1L chr9 131111663 + SYN2 chr3 12161546 + Exonic hg38 SKCM TCGA-EB-A4P0-01A 2 28 Out-of-frame Inter-chr q34.12 p25.2 Seq+ 102974 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPP14-ABHD6 RPP14 chr3 58310591 + ABHD6 chr3 58267189 + Exonic hg38 SKCM TCGA-EB-A4P0-01A 4 12 Out-of-frame Intra-chr p14.3 p14.3 Seq+ 102975 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC7-USP10 ZDHHC7 chr16 84977924 - USP10 chr16 84758716 + Exonic hg38 SKCM TCGA-EB-A4XL-01A 18 108 In-Frame Intra-chr q24.1 q24.1 Seq+ 102976 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCA-PITPNC1 PRKCA chr17 66306127 + PITPNC1 chr17 67669508 + Exonic hg38 SKCM TCGA-EB-A4XL-01A 16 47 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 102977 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOX5-RASA4 SOX5 chr12 23895898 - RASA4 chr7 102611142 - Exonic hg38 SKCM TCGA-EB-A4XL-01A 12 42 Out-of-frame Inter-chr p12.1 Transcription factor q22.1 Seq+ 102978 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRISPLD2-MPZL2 CRISPLD2 chr16 84889363 + MPZL2 chr11 118255233 - Exonic hg38 SKCM TCGA-EB-A4XL-01A 7 35 CDS-3'UTR Inter-chr q24.1 q23.3 Seq+ 102979 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFE2L1-SLC39A11 NFE2L1 chr17 48057502 + SLC39A11 chr17 72947875 - Exonic hg38 SKCM TCGA-EB-A4XL-01A 6 14 In-Frame Intra-chr q21.32 Transcription factor q25.1 Seq+ 102980 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41-ITPR1 EPB41 chr1 29109437 + ITPR1 chr3 4733088 + Exonic hg38 SKCM TCGA-EB-A4XL-01A 4 11 In-Frame Inter-chr p35.3 Tumor suppressor gene p26.1 Seq+ 102981 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2A-ZDHHC7 KMT2A chr11 118436944 + ZDHHC7 chr16 84977225 - Exonic hg38 SKCM TCGA-EB-A4XL-01A 2 14 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor q24.1 102982 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKAP1-CALCOCO2 SKAP1 chr17 48345905 - CALCOCO2 chr17 48841698 + Exonic hg38 SKCM TCGA-EB-A4XL-01A 2 7 CDS-5'UTR Intra-chr q21.32 q21.32 Seq+ 102983 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 11869969 + NTRK3 chr15 87940753 - Exonic hg38 SKCM TCGA-EB-A51B-01A 9 26 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 102984 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2F1-ACP5 GTF2F1 chr19 6383311 - ACP5 chr19 11575252 - Exonic hg38 SKCM TCGA-EB-A550-01A 31 83 Out-of-frame Intra-chr p13.3 p13.2 Seq+ 102985 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACP5-GTF2F1 ACP5 chr19 11577593 - GTF2F1 chr19 6389637 - Exonic hg38 SKCM TCGA-EB-A550-01A 10 51 5'UTR-CDS Intra-chr p13.2 p13.3 Seq+ 102986 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM2-ZGLP1 DNM2 chr19 10718403 + ZGLP1 chr19 10308550 - Exonic hg38 SKCM TCGA-EB-A550-01A 3 21 Out-of-frame Intra-chr p13.2 p13.2 Transcription factor Seq+ 102987 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHD4-GPR176 EHD4 chr15 41972259 - GPR176 chr15 39807258 - Exonic hg38 SKCM TCGA-EB-A550-01A 2 5 Out-of-frame Intra-chr q15.1 q15.1 Seq+ 102988 ChimerSeq TCGA FAWG TCGA_RNA-Seq LCLAT1-EPHA3 LCLAT1 chr2 30533314 + EPHA3 chr3 89340916 + Exonic hg38 SKCM TCGA-EB-A550-01A 1 6 In-Frame Inter-chr p23.1 p11.1 Oncogene Tumor suppressor gene Seq+ 102989 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF786-DENND6B ZNF786 chr7 149074386 - DENND6B chr22 50319003 - Exonic hg38 SKCM TCGA-EB-A551-01A 19 21 Out-of-frame Inter-chr q36.1 Transcription factor q13.33 Seq+ 102990 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRF-CFAP74 PTPRF chr1 43538277 + CFAP74 chr1 1930336 - Exonic hg38 SKCM TCGA-EB-A551-01A 5 36 5'UTR-CDS Intra-chr p34.2 p36.33 102991 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGDCC4-ORAI3 IGDCC4 chr15 65400806 - ORAI3 chr16 30956200 + Exonic hg38 SKCM TCGA-EB-A551-01A 2 9 CDS-3'UTR Inter-chr q22.31 p11.2 Seq+ 102992 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPRS-USH2A EPRS chr1 220040185 - USH2A chr1 215680376 - Exonic hg38 SKCM TCGA-EB-A551-01A 1 7 Out-of-frame Intra-chr q41 q41 Seq+ 102993 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPF38A-ABCD3 PRPF38A chr1 52405839 + ABCD3 chr1 94458607 + Exonic hg38 SKCM TCGA-EB-A551-01A 1 7 In-Frame Intra-chr p32.3 p21.3 Seq+ 102994 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPATA6-CRYZ SPATA6 chr1 48471958 - CRYZ chr1 74724834 - Exonic hg38 SKCM TCGA-EB-A551-01A 1 7 CDS-5'UTR Intra-chr p33 p31.1 Seq+ 102995 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNN3-CACHD1 CNN3 chr1 94926838 - CACHD1 chr1 64582156 + Exonic hg38 SKCM TCGA-EB-A551-01A 1 3 In-Frame Intra-chr p21.3 p31.3 Seq+ 102996 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP5-UVRAG LRP5 chr11 68439916 + UVRAG chr11 76065710 + Exonic hg38 SKCM TCGA-EB-A57M-01A 3 5 Out-of-frame Intra-chr q13.2 q13.5 Tumor suppressor gene Seq+ 102997 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYNC2H1-NARS2 DYNC2H1 chr11 103117863 + NARS2 chr11 78528936 - Exonic hg38 SKCM TCGA-EB-A57M-01A 2 8 In-Frame Intra-chr q22.3 q14.1 Seq+ 102998 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARRB1-CCDC90B ARRB1 chr11 75276839 - CCDC90B chr11 83280260 - Exonic hg38 SKCM TCGA-EB-A57M-01A 2 3 Out-of-frame Intra-chr q13.4 q14.1 Seq+ 102999 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H15-GULP1 ZC3H15 chr2 186486457 + GULP1 chr2 188477659 + Exonic hg38 SKCM TCGA-EB-A57M-01A 2 3 CDS-5'UTR Intra-chr q32.1 q32.1 Seq+ 103000 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPIP5K2-PRODH PPIP5K2 chr5 103173972 + PRODH chr22 18919798 - Exonic hg38 SKCM TCGA-EB-A5KH-06A 8 53 CDS-5'UTR Inter-chr q21.1 q11.21 Tumor suppressor gene Seq+ 103001 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA5A-RBFOX2 SEMA5A chr5 9545584 - RBFOX2 chr22 35761468 - Exonic hg38 SKCM TCGA-EB-A5KH-06A 3 65 5'UTR-5'UTR Inter-chr p15.31 Seq+ 103002 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPECC1L-MED15 SPECC1L chr22 24412707 + MED15 chr22 20551436 + Exonic hg38 SKCM TCGA-EB-A5KH-06A 8 18 In-Frame Intra-chr q11.23 q11.21 Seq+ 103003 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM167A-PAM TMEM167A chr5 83061877 - PAM chr5 102959875 + Exonic hg38 SKCM TCGA-EB-A5KH-06A 7 22 Out-of-frame Intra-chr q14.2 q21.1 Seq+ 103004 ChimerSeq TCGA FAWG TCGA_RNA-Seq COMT-ZDHHC8 COMT chr22 19941897 + ZDHHC8 chr22 20139194 + Exonic hg38 SKCM TCGA-EB-A5KH-06A 6 23 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 103005 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBFOX2-MED15 RBFOX2 chr22 36028240 - MED15 chr22 20551436 + Exonic hg38 SKCM TCGA-EB-A5KH-06A 5 16 5'UTR-CDS Intra-chr q11.21 Seq+ 103006 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOB2-MPPED1 TOB2 chr22 41446379 - MPPED1 chr22 43424908 + Exonic hg38 SKCM TCGA-EB-A5KH-06A 6 12 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 103007 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACO2-AHRR ACO2 chr22 41469182 + AHRR chr5 422729 + Exonic hg38 SKCM TCGA-EB-A5KH-06A 7 5 5'UTR-CDS Inter-chr q13.2 p15.33 Tumor suppressor gene Transcription factor Seq+ 103008 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPYSL3-IL17B DPYSL3 chr5 147509478 - IL17B chr5 149377025 - Exonic hg38 SKCM TCGA-EB-A5KH-06A 4 9 In-Frame Intra-chr q32 q32 Seq+ 103009 ChimerSeq TCGA FAWG TCGA_RNA-Seq UFSP2-ZNF621 UFSP2 chr4 185425866 - ZNF621 chr3 40574383 + Exonic hg38 SKCM TCGA-EB-A5KH-06A 5 5 3'UTR-3'UTR Inter-chr q35.1 p22.1 Transcription factor Seq+ 103010 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGXB3-PAM HMGXB3 chr5 150006647 + PAM chr5 102901356 + Exonic hg38 SKCM TCGA-EB-A5KH-06A 2 15 In-Frame Intra-chr q32 q21.1 Seq+ 103011 ChimerSeq TCGA FAWG TCGA_RNA-Seq L3MBTL2-EFCAB6 L3MBTL2 chr22 41214026 + EFCAB6 chr22 43678163 - Exonic hg38 SKCM TCGA-EB-A5KH-06A 3 4 In-Frame Intra-chr q13.2 q13.31 Seq+ 103012 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM167A-ABLIM3 TMEM167A chr5 83077321 - ABLIM3 chr5 149216959 + Exonic hg38 SKCM TCGA-EB-A5KH-06A 1 12 In-Frame Intra-chr q14.2 q32 Seq+ 103013 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIC2-SNX2 HIC2 chr22 21442857 + SNX2 chr5 122795266 + Exonic hg38 SKCM TCGA-EB-A5KH-06A 2 0 Out-of-frame Inter-chr q11.21 Transcription factor q23.2 103014 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM167A-NUDT12 TMEM167A chr5 83077321 - NUDT12 chr5 103560254 - Exonic hg38 SKCM TCGA-EB-A5KH-06A 1 4 CDS-5'UTR Intra-chr q14.2 q21.2 103015 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSBN1L-HGF RSBN1L chr7 77697055 + HGF chr7 81745120 - Exonic hg38 SKCM TCGA-EB-A5SE-01A 5 35 In-Frame Intra-chr q11.23 q21.11 Oncogene Seq+ 103016 ChimerSeq TCGA FAWG TCGA_RNA-Seq OBSCN-DISC1 OBSCN chr1 228245688 + DISC1 chr1 231693826 + Exonic hg38 SKCM TCGA-EB-A5SE-01A 4 22 In-Frame Intra-chr q42.13 q42.2 Seq+ 103017 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBRM1-NEK4 PBRM1 chr3 52603521 - NEK4 chr3 52739634 - Exonic hg38 SKCM TCGA-EB-A5SE-01A 3 14 Out-of-frame Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 Other:NEK Seq+ 103018 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMNA-RAF1 LMNA chr1 156137743 + RAF1 chr3 12600415 - Exonic hg38 SKCM TCGA-EB-A5SF-01A 5 29 In-Frame Inter-chr q22 p25.2 TKL:RAF Oncogene Seq+ 103019 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE4DIP-OSMR PDE4DIP chr1 149017879 + OSMR chr5 38932463 + Exonic hg38 SKCM TCGA-EB-A5SF-01A 1 3 Out-of-frame Inter-chr q21.2 Oncogene p13.1 Seq+ 103020 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHRR-PLEKHG4B AHRR chr5 376716 + PLEKHG4B chr5 181514 + Exonic hg38 SKCM TCGA-EB-A5SF-01A 1 2 Out-of-frame Intra-chr p15.33 Tumor suppressor gene Transcription factor p15.33 103021 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAB2-NUDC GAB2 chr11 78417646 - NUDC chr1 26924089 + Exonic hg38 SKCM TCGA-EB-A5SH-06A 123 258 In-Frame Inter-chr q14.1 p36.11 Seq+ 103022 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBNO2-RAP1GAP SBNO2 chr19 1154184 - RAP1GAP chr1 21649796 - Exonic hg38 SKCM TCGA-EB-A5SH-06A 46 235 5'UTR-5'UTR Inter-chr p13.3 p36.12 Tumor suppressor gene Seq+ 103023 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHERP-HSH2D CHERP chr19 16532598 - HSH2D chr19 16157210 + Exonic hg38 SKCM TCGA-EB-A5SH-06A 34 223 In-Frame Intra-chr p13.11 p13.11 Seq+ 103024 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAP2-NLRX1 SMAP2 chr1 40374223 + NLRX1 chr11 119171356 + Exonic hg38 SKCM TCGA-EB-A5SH-06A 23 40 CDS-5'UTR Inter-chr p34.2 q23.3 Seq+ 103025 ChimerSeq TCGA FAWG TCGA_RNA-Seq C6orf106-PRAMEF19 C6orf106 chr6 34646601 - PRAMEF19 chr1 13369640 - Exonic hg38 SKCM TCGA-EB-A5SH-06A 5 67 Out-of-frame Inter-chr p21.31 p36.21 103026 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD2AP-FKBP5 CD2AP chr6 47533755 + FKBP5 chr6 35720548 - Exonic hg38 SKCM TCGA-EB-A5SH-06A 8 33 CDS-5'UTR Intra-chr p12.3 p21.31 Seq+ 103027 ChimerSeq TCGA FAWG TCGA_RNA-Seq DUSP16-PDE2A DUSP16 chr12 12562117 - PDE2A chr11 72631139 - Exonic hg38 SKCM TCGA-EB-A5SH-06A 1 14 5'UTR-CDS Inter-chr q13.4 103028 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANO1-KIF21A ANO1 chr11 70078714 + KIF21A chr12 39311553 - Exonic hg38 SKCM TCGA-EB-A5SH-06A 2 9 Out-of-frame Inter-chr q13.3 q12 Seq+ 103029 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HCC1L-PCBP2 R3HCC1L chr10 98186563 + PCBP2 chr12 53479406 + Exonic hg38 SKCM TCGA-EB-A5UL-06A 2 21 5'UTR-CDS Inter-chr q24.2 q13.13 Seq+ 103030 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCBP2-R3HCC1L PCBP2 chr12 53471807 + R3HCC1L chr10 98208101 + Exonic hg38 SKCM TCGA-EB-A5UL-06A 3 6 CDS-5'UTR Inter-chr q13.13 q24.2 Seq+ 103031 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNDC3B-SUCNR1 FNDC3B chr3 172133546 + SUCNR1 chr3 151879852 + Exonic hg38 SKCM TCGA-EB-A5UL-06A 2 6 CDS-5'UTR Intra-chr q26.31 q25.1 Seq+ 103032 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHCHD6-MYO1A CHCHD6 chr3 126780430 + MYO1A chr12 57031174 - Exonic hg38 SKCM TCGA-EB-A5UL-06A 2 4 Out-of-frame Inter-chr q21.3 q13.3 Tumor suppressor gene Seq+ 103033 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNDC3B-PGM5 FNDC3B chr3 172133546 + PGM5 chr9 68479418 + Exonic hg38 SKCM TCGA-EB-A5UL-06A 1 7 In-Frame Inter-chr q26.31 q21.11 Seq+ 103034 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC167-RRP7A CCDC167 chr6 37499822 - RRP7A chr22 42518147 - Exonic hg38 SKCM TCGA-EB-A5UM-01A 6 23 Out-of-frame Inter-chr p21.2 q13.2 Seq+ 103035 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPC1-DIP2C EPC1 chr10 32378491 - DIP2C chr10 419199 - Exonic hg38 SKCM TCGA-EB-A5UN-06A 1 33 Out-of-frame Intra-chr p11.22 p15.3 Seq+ 103036 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTF1-JMJD7 RTF1 chr15 41417313 + JMJD7 chr15 41834740 + Exonic hg38 SKCM TCGA-EB-A5VU-01A 4 28 Out-of-frame Intra-chr q15.1 q15.1 Seq+ 103037 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX27-ATP9A DDX27 chr20 49219541 + ATP9A chr20 51670109 - Exonic hg38 SKCM TCGA-EB-A5VU-01A 2 12 Out-of-frame Intra-chr q13.13 q13.2 Seq+ 103038 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPM1-KIF16B DPM1 chr20 50955186 - KIF16B chr20 16371761 - Exonic hg38 SKCM TCGA-EB-A5VU-01A 1 9 Out-of-frame Intra-chr q13.13 p12.1 103039 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAE1-ADNP RAE1 chr20 57356538 + ADNP chr20 50904001 - Exonic hg38 SKCM TCGA-EB-A5VU-01A 1 5 CDS-5'UTR Intra-chr q13.31 q13.13 Transcription factor 103040 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRBD1-C2orf91 SRBD1 chr2 45562653 - C2orf91 chr2 41938613 - Exonic hg38 SKCM TCGA-EB-A6L9-06A 16 49 CDS-3'UTR Intra-chr p21 p21 Seq+ 103041 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCE-ADGRG6 PRKCE chr2 45843063 + ADGRG6 chr6 142437434 + Exonic hg38 SKCM TCGA-EB-A6L9-06A 2 36 In-Frame Inter-chr p21 Tumor suppressor gene q24.2 103042 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF404-LYPD5 ZNF404 chr19 43900868 - LYPD5 chr19 43799834 - Exonic hg38 SKCM TCGA-EB-A6L9-06A 6 9 5'UTR-5'UTR Intra-chr q13.31 Transcription factor q13.31 103043 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEX19-AIG1 PEX19 chr1 160282944 - AIG1 chr6 143165082 + Exonic hg38 SKCM TCGA-EB-A6L9-06A 3 16 Out-of-frame Inter-chr q23.2 q24.2 Seq+ 103044 ChimerSeq TCGA FAWG TCGA_RNA-Seq YWHAE-TXLNB YWHAE chr17 1400047 - TXLNB chr6 139247909 - Exonic hg38 SKCM TCGA-EB-A6L9-06A 2 11 5'UTR-CDS Inter-chr p13.3 q24.1 Seq+ 103045 ChimerSeq TCGA FAWG TCGA_RNA-Seq UTRN-PITPNA UTRN chr6 144474759 + PITPNA chr17 1548387 - Exonic hg38 SKCM TCGA-EB-A6L9-06A 1 3 Out-of-frame Inter-chr q24.2 p13.3 103046 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTSS-TDRD10 CTSS chr1 150747777 - TDRD10 chr1 154547409 + Exonic hg38 SKCM TCGA-EB-A6QY-01A 18 91 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 103047 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNQ5-ALK KCNQ5 chr6 72622587 + ALK chr2 29275496 - Exonic hg38 SKCM TCGA-EB-A6QY-01A 3 9 In-Frame Inter-chr q13 p23.1 TK:ALK Oncogene Seq+ 103048 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KA4-TEX40 RPS6KA4 chr11 64359449 + TEX40 chr11 64303482 + Exonic hg38 SKCM TCGA-EB-A82B-01A 223 835 Out-of-frame Intra-chr q13.1 Seq+ 103049 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHDC1-DNAJC8 AHDC1 chr1 27603397 - DNAJC8 chr1 28210637 - Exonic hg38 SKCM TCGA-EB-A82B-01A 18 128 5'UTR-5'UTR Intra-chr p35.3 Transcription factor p35.3 Seq+ 103050 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB6A-IFITM9P RAB6A chr11 73716251 - IFITM9P chr11 69303766 - Exonic hg38 SKCM TCGA-EB-A82B-01A 14 92 Out-of-frame Intra-chr q13.4 q13.3 103051 ChimerSeq TCGA FAWG TCGA_RNA-Seq RGS20-MCPH1 RGS20 chr8 53881084 + MCPH1 chr8 6477594 + Exonic hg38 SKCM TCGA-EB-A82B-01A 10 47 CDS-3'UTR Intra-chr q11.23 p23.1 Tumor suppressor gene Seq+ 103052 ChimerSeq TCGA FAWG TCGA_RNA-Seq YAP1-MRPL48 YAP1 chr11 102162571 + MRPL48 chr11 73863172 + Exonic hg38 SKCM TCGA-EB-A82B-01A 3 66 Out-of-frame Intra-chr q22.1 Tumor suppressor gene q13.4 Seq+ 103053 ChimerSeq TCGA FAWG TCGA_RNA-Seq FEN1-GDPD4 FEN1 chr11 61793028 + GDPD4 chr11 77229232 - Exonic hg38 SKCM TCGA-EB-A82B-01A 5 20 5'UTR-CDS Intra-chr q12.2 q13.5 Seq+ 103054 ChimerSeq TCGA FAWG TCGA_RNA-Seq FADS2-GDPD4 FADS2 chr11 61793028 + GDPD4 chr11 77229232 - Exonic hg38 SKCM TCGA-EB-A82B-01A 5 17 5'UTR-CDS Intra-chr q12.2 q13.5 103055 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN12-ADGRB1 PTPN12 chr7 77637048 + ADGRB1 chr8 142518138 + Exonic hg38 SKCM TCGA-EB-A82B-01A 4 18 Out-of-frame Inter-chr q11.23 Tumor suppressor gene q24.3 103056 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK1-RAD9A PAK1 chr11 77473552 - RAD9A chr11 67387535 + Exonic hg38 SKCM TCGA-EB-A82B-01A 5 8 5'UTR-5'UTR Intra-chr q14.1 STE:STE20 q13.2 103057 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOT2-MMP2 GOT2 chr16 58718196 - MMP2 chr16 55482909 + Exonic hg38 SKCM TCGA-EB-A82B-01A 3 9 In-Frame Intra-chr q21 q12.2 Oncogene Seq+ 103058 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCTD21-RSF1 KCTD21 chr11 78188573 - RSF1 chr11 77764689 - Exonic hg38 SKCM TCGA-EB-A82B-01A 4 2 5'UTR-CDS Intra-chr q14.1 q14.1 103059 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK1-EYS PAK1 chr11 77473552 - EYS chr6 63999183 - Exonic hg38 SKCM TCGA-EB-A82B-01A 1 5 5'UTR-CDS Inter-chr q14.1 STE:STE20 q12 103060 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACER3-ZNF451 ACER3 chr11 76861079 + ZNF451 chr6 57090811 + Exonic hg38 SKCM TCGA-EB-A82B-01A 1 2 Out-of-frame Inter-chr q13.5 p12.1 Transcription factor 103061 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTBP3-SVEP1 PTBP3 chr9 112333470 - SVEP1 chr9 110379517 - Exonic hg38 SKCM TCGA-EB-A82C-01A 41 237 Out-of-frame Intra-chr q32 q31.3 Seq+ 103062 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL17-TMEM232 FBXL17 chr5 108186117 - TMEM232 chr5 110606287 - Exonic hg38 SKCM TCGA-EB-A82C-01A 15 95 In-Frame Intra-chr q21.3 q22.1 Seq+ 103063 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP47-RRAS2 USP47 chr11 11842224 + RRAS2 chr11 14295855 - Exonic hg38 SKCM TCGA-EB-A82C-01A 11 56 In-Frame Intra-chr p15.3 p15.2 Seq+ 103064 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABI1-CUBN ABI1 chr10 26860747 - CUBN chr10 16990515 - Exonic hg38 SKCM TCGA-EB-A82C-01A 4 58 3'UTR-3'UTR Intra-chr p12.1 p13 Seq+ 103065 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1orf159-ATAD3C C1orf159 chr1 1116060 - ATAD3C chr1 1450681 + Exonic hg38 SKCM TCGA-EB-A82C-01A 18 2 5'UTR-5'UTR Intra-chr p36.33 p36.33 Seq+ 103066 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM1-HS2ST1 PUM1 chr1 31059204 - HS2ST1 chr1 87072934 + Exonic hg38 SKCM TCGA-EB-A82C-01A 2 25 Out-of-frame Intra-chr p35.2 p22.3 Seq+ 103067 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS15-C1orf159 EPS15 chr1 51463673 - C1orf159 chr1 1092103 - Exonic hg38 SKCM TCGA-EB-A82C-01A 3 19 CDS-5'UTR Intra-chr p32.3 p36.33 Seq+ 103068 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMIM1-DLGAP3 SMIM1 chr1 3773181 + DLGAP3 chr1 34900273 - Exonic hg38 SKCM TCGA-EB-A82C-01A 3 16 5'UTR-CDS Intra-chr p36.32 p34.3 Seq+ 103069 ChimerSeq TCGA FAWG TCGA_RNA-Seq FER-FBXL17 FER chr5 108897848 + FBXL17 chr5 107861860 - Exonic hg38 SKCM TCGA-EB-A82C-01A 2 15 In-Frame Intra-chr q21.3 TK:Fer q21.3 Seq+ 103070 ChimerSeq TCGA FAWG TCGA_RNA-Seq TGFBR3-NRDC TGFBR3 chr1 91861471 - NRDC chr1 51840514 - Exonic hg38 SKCM TCGA-EB-A82C-01A 1 18 Out-of-frame Intra-chr p22.1 Tumor suppressor gene p32.3 103071 ChimerSeq TCGA FAWG TCGA_RNA-Seq PJA2-TMEM232 PJA2 chr5 109409842 - TMEM232 chr5 110332925 - Exonic hg38 SKCM TCGA-EB-A82C-01A 1 17 5'UTR-3'UTR Intra-chr q21.3 q22.1 103072 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIA-AGBL4 NFIA chr1 61383365 + AGBL4 chr1 48867230 - Exonic hg38 SKCM TCGA-EB-A82C-01A 4 3 Out-of-frame Intra-chr p31.3 Transcription factor p33 Seq+ 103073 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHDC1-CACHD1 AHDC1 chr1 27603397 - CACHD1 chr1 64647801 + Exonic hg38 SKCM TCGA-EB-A82C-01A 1 11 5'UTR-CDS Intra-chr p35.3 Transcription factor p31.3 Seq+ 103074 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD1-SPEF2 RAD1 chr5 34914695 - SPEF2 chr5 35691037 + Exonic hg38 SKCM TCGA-EB-A82C-01A 2 7 In-Frame Intra-chr p13.2 p13.2 Seq+ 103075 ChimerSeq TCGA FAWG TCGA_RNA-Seq RABGAP1-PBX3 RABGAP1 chr9 123020459 + PBX3 chr9 125929655 + Exonic hg38 SKCM TCGA-EB-A82C-01A 1 5 In-Frame Intra-chr q33.2 q33.3 Transcription factor Seq+ 103076 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPQ-RABGEF1 CPQ chr8 97029494 + RABGEF1 chr7 66712167 + Exonic hg38 SKCM TCGA-EB-A85I-01A 2 16 CDS-5'UTR Inter-chr q22.1 q11.21 103077 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEDD9-DTNBP1 NEDD9 chr6 11232504 - DTNBP1 chr6 15533395 - Exonic hg38 SKCM TCGA-EB-A85J-01A 18 85 Out-of-frame Intra-chr p24.2 p22.3 Seq+ 103078 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLGA5-RIN3 GOLGA5 chr14 92809519 + RIN3 chr14 92555751 + Exonic hg38 SKCM TCGA-EB-A85J-01A 12 30 In-Frame Intra-chr q32.12 q32.12 Seq+ 103079 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOR4A-UAP1L1 TOR4A chr9 137279830 + UAP1L1 chr9 137080002 + Exonic hg38 SKCM TCGA-EB-A85J-01A 6 16 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 103080 ChimerSeq TCGA FAWG TCGA_RNA-Seq WRNIP1-SERPINB6 WRNIP1 chr6 2770361 + SERPINB6 chr6 2959342 - Exonic hg38 SKCM TCGA-EB-A85J-01A 3 4 In-Frame Intra-chr p25.2 p25.2 Seq+ 103081 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSTYK-BRAF DSTYK chr1 205211271 - BRAF chr7 140783157 - Exonic hg38 SKCM TCGA-EB-A97M-01A 7 30 In-Frame Inter-chr q32.1 q34 TKL:RAF Oncogene Seq+ 103082 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAI1-NOS2 RAI1 chr17 17724159 + NOS2 chr17 27767837 - Exonic hg38 SKCM TCGA-EE-A17Y-06A 2 3 5'UTR-CDS Intra-chr p11.2 q11.2 Seq+ 103083 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1A-DGKA ARID1A chr1 26780231 + DGKA chr12 55952905 + Exonic hg38 SKCM TCGA-EE-A17Z-06A 98 355 Out-of-frame Inter-chr p36.11 Oncogene Tumor suppressor gene q13.2 Seq+ 103084 ChimerSeq TCGA FAWG TCGA_RNA-Seq YAP1-MAML2 YAP1 chr11 102206074 + MAML2 chr11 96093517 - Exonic hg38 SKCM TCGA-EE-A17Z-06A 3 18 In-Frame Intra-chr q22.1 Tumor suppressor gene q21 Oncogene KB Pub Seq+ 103085 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASB1-SH3BP4 ASB1 chr2 238436009 + SH3BP4 chr2 235034867 + Exonic hg38 SKCM TCGA-EE-A17Z-06A 4 12 Out-of-frame Intra-chr q37.3 q37.2 Seq+ 103086 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED15-BCL2L13 MED15 chr22 20568631 + BCL2L13 chr22 17638102 + Exonic hg38 SKCM TCGA-EE-A17Z-06A 2 16 CDS-5'UTR Intra-chr q11.21 q11.21 Seq+ 103087 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIP1-SLC30A5 HIP1 chr7 75581237 - SLC30A5 chr5 69129447 + Exonic hg38 SKCM TCGA-EE-A17Z-06A 4 7 Out-of-frame Inter-chr q11.23 q13.1 Seq+ 103088 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAML2-YAP1 MAML2 chr11 96341383 - YAP1 chr11 102223622 + Exonic hg38 SKCM TCGA-EE-A17Z-06A 2 6 In-Frame Intra-chr q21 Oncogene q22.1 Tumor suppressor gene Seq+ 103089 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZCWPW2-OSBPL10 ZCWPW2 chr3 28349203 + OSBPL10 chr3 31879830 - Exonic hg38 SKCM TCGA-EE-A17Z-06A 2 2 5'UTR-CDS Intra-chr p24.1 p22.3 103090 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP6-PRKD1 AKAP6 chr14 32600792 + PRKD1 chr14 29626556 - Exonic hg38 SKCM TCGA-EE-A181-06A 39 295 In-Frame Intra-chr q12 q12 Seq+ 103091 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR63-NPC1L1 GPR63 chr6 96837268 - NPC1L1 chr7 44522242 - Exonic hg38 SKCM TCGA-EE-A181-06A 2 4 5'UTR-CDS Inter-chr q16.1 p13 103092 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOGA3-NPC1L1 SOGA3 chr6 127475293 - NPC1L1 chr7 44522242 - Exonic hg38 SKCM TCGA-EE-A181-06A 1 2 In-Frame Inter-chr q22.33 p13 103093 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR33-LRP1B WDR33 chr2 127763062 - LRP1B chr2 141810401 - Exonic hg38 SKCM TCGA-EE-A181-06A 1 1 In-Frame Intra-chr q14.3 q22.2 Oncogene Tumor suppressor gene 103094 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF11-PLEKHA6 ARHGEF11 chr1 157044299 - PLEKHA6 chr1 204274809 - Exonic hg38 SKCM TCGA-EE-A182-06A 4 37 CDS-5'UTR Intra-chr q23.1 q32.1 Seq+ 103095 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPN2-SH2D1B CAPN2 chr1 223766416 + SH2D1B chr1 162399087 - Exonic hg38 SKCM TCGA-EE-A182-06A 3 13 In-Frame Intra-chr q41 q23.3 Seq+ 103096 ChimerSeq TCGA FAWG TCGA_RNA-Seq THEM4-ARHGEF11 THEM4 chr1 151888273 - ARHGEF11 chr1 156940425 - Exonic hg38 SKCM TCGA-EE-A182-06A 2 4 Out-of-frame Intra-chr q21.3 q23.1 103097 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPRED1-FRG1CP SPRED1 chr15 38253217 + FRG1CP chr20 28600461 - Exonic hg38 SKCM TCGA-EE-A183-06A 13 12 CDS-3'UTR Inter-chr q14 q11.1 103098 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF3L-CECR1 EIF3L chr22 37878171 + CECR1 chr22 17191810 - Exonic hg38 SKCM TCGA-EE-A184-06A 65 364 Out-of-frame Intra-chr q13.1 Seq+ 103099 ChimerSeq TCGA FAWG TCGA_RNA-Seq FREM2-SNAP29 FREM2 chr13 38697787 + SNAP29 chr22 20887679 + Exonic hg38 SKCM TCGA-EE-A184-06A 13 209 In-Frame Inter-chr q13.3 q11.21 Seq+ 103100 ChimerSeq TCGA FAWG TCGA_RNA-Seq COMT-ZDHHC11 COMT chr22 19941897 + ZDHHC11 chr5 825251 - Exonic hg38 SKCM TCGA-EE-A184-06A 36 59 5'UTR-CDS Inter-chr q11.21 p15.33 Seq+ 103101 ChimerSeq TCGA FAWG TCGA_RNA-Seq C5orf42-1639H6.2 C5orf42 chr5 37173785 - 1639H6.2 chr8 103021225 - Exonic hg38 SKCM TCGA-EE-A184-06A 28 41 Out-of-frame Inter-chr p13.2 103102 ChimerSeq TCGA FAWG TCGA_RNA-Seq RICTOR-LHFP RICTOR chr5 38966641 - LHFP chr13 39378526 - Exonic hg38 SKCM TCGA-EE-A184-06A 3 4 Out-of-frame Inter-chr p13.1 q14.11 Seq+ 103103 ChimerSeq TCGA FAWG TCGA_RNA-Seq VWA8-RICTOR VWA8 chr13 41960853 - RICTOR chr5 38964892 - Exonic hg38 SKCM TCGA-EE-A184-06A 1 3 Out-of-frame Inter-chr q14.11 p13.1 103104 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFR-RPL3 ZFR chr5 32444229 - RPL3 chr22 39318592 - Exonic hg38 SKCM TCGA-EE-A184-06A 1 2 Out-of-frame Inter-chr p13.3 q13.1 103105 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL5-SLC22A18AS OSBPL5 chr11 3165216 - SLC22A18AS chr11 2888635 - Exonic hg38 SKCM TCGA-EE-A20C-06A 7 13 5'UTR-5'UTR Intra-chr p15.4 Seq+ 103106 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLD3-ENC1 POLD3 chr11 74613010 + ENC1 chr5 74637701 - Exonic hg38 SKCM TCGA-EE-A20C-06A 1 4 5'UTR-5'UTR Inter-chr q13.4 q13.3 Seq+ 103107 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLPTM1L-VARS CLPTM1L chr5 1337904 - VARS chr6 31795250 - Exonic hg38 SKCM TCGA-EE-A20F-06A 269 767 3'UTR-5'UTR Inter-chr p15.33 Seq+ 103108 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEF1G-NXF1 EEF1G chr11 62566806 - NXF1 chr11 62796345 - Exonic hg38 SKCM TCGA-EE-A20F-06A 66 248 In-Frame Intra-chr q12.3 q12.3 Seq+ 103109 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGRN1-C16orf96 MGRN1 chr16 4625048 + C16orf96 chr16 4571561 + Exonic hg38 SKCM TCGA-EE-A20F-06A 16 50 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 103110 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCYL3-CLPTM1L SCYL3 chr1 169888676 - CLPTM1L chr5 1325816 - Exonic hg38 SKCM TCGA-EE-A20F-06A 4 10 CDS-3'UTR Inter-chr q24.2 Other:SCY1 p15.33 Seq+ 103111 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPHP4-CDKN2A NPHP4 chr1 5986155 - CDKN2A chr9 21971208 - Exonic hg38 SKCM TCGA-EE-A20H-06A 51 218 In-Frame Inter-chr p36.31 p21.3 Oncogene Tumor suppressor gene Seq+ 103112 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR158-KIAA1217 GPR158 chr10 25221157 + KIAA1217 chr10 24513259 + Exonic hg38 SKCM TCGA-EE-A20I-06A 91 306 In-Frame Intra-chr p12.1 p12.2 Seq+ 103113 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRP2-PARD3B NRP2 chr2 205792285 + PARD3B chr2 205553324 + Exonic hg38 SKCM TCGA-EE-A20I-06A 14 45 Out-of-frame Intra-chr q33.3 q33.3 Seq+ 103114 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMBRD2-CTNND2 LMBRD2 chr5 36108534 - CTNND2 chr5 11364890 - Exonic hg38 SKCM TCGA-EE-A20I-06A 16 30 In-Frame Intra-chr p13.2 p15.2 Seq+ 103115 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKLN1-CDK14 MKLN1 chr7 131397376 + CDK14 chr7 90747681 + Exonic hg38 SKCM TCGA-EE-A20I-06A 9 35 In-Frame Intra-chr q32.3 q21.13 Seq+ 103116 ChimerSeq TCGA FAWG TCGA_RNA-Seq BBX-TBC1D23 BBX chr3 107526398 + TBC1D23 chr3 100283607 + Exonic hg38 SKCM TCGA-EE-A20I-06A 5 30 5'UTR-CDS Intra-chr q13.12 Transcription factor q12.1 Seq+ 103117 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHCHD3-MKLN1 CHCHD3 chr7 133070142 - MKLN1 chr7 131411306 + Exonic hg38 SKCM TCGA-EE-A20I-06A 4 18 In-Frame Intra-chr q33 Transcription factor q32.3 Seq+ 103118 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKLN1-GRM8 MKLN1 chr7 131411383 + GRM8 chr7 127243515 - Exonic hg38 SKCM TCGA-EE-A20I-06A 3 21 CDS-5'UTR Intra-chr q32.3 q31.33 Oncogene Seq+ 103119 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPBL-BASP1 NIPBL chr5 37001078 + BASP1 chr5 17275208 + Exonic hg38 SKCM TCGA-EE-A20I-06A 2 18 CDS-5'UTR Intra-chr p13.2 p15.1 Tumor suppressor gene Seq+ 103120 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK14-TFEC CDK14 chr7 90899353 + TFEC chr7 115984513 - Exonic hg38 SKCM TCGA-EE-A20I-06A 1 19 CDS-5'UTR Intra-chr q21.13 q31.2 Transcription factor Seq+ 103121 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMBRD2-ICE1 LMBRD2 chr5 36109945 - ICE1 chr5 5457680 + Exonic hg38 SKCM TCGA-EE-A20I-06A 4 5 Out-of-frame Intra-chr p13.2 p15.32 103122 ChimerSeq TCGA FAWG TCGA_RNA-Seq SP110-TPTE2P2 SP110 chr2 230207991 - TPTE2P2 chr13 52227096 - Exonic hg38 SKCM TCGA-EE-A20I-06A 1 13 Out-of-frame Inter-chr q37.1 Transcription factor q14.3 103123 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASTN2-AKAP2 ASTN2 chr9 116618324 - AKAP2 chr9 110136127 + Exonic hg38 SKCM TCGA-EE-A29A-06A 8 29 Out-of-frame Intra-chr q33.1 q31.3 Seq+ 103124 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP58-KL NUP58 chr13 25301880 + KL chr13 33053767 + Exonic hg38 SKCM TCGA-EE-A29C-06A 5 15 Out-of-frame Intra-chr q12.13 q13.1 Tumor suppressor gene 103125 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP3-FXR2 SENP3 chr17 7567004 + FXR2 chr17 7595994 - Exonic hg38 SKCM TCGA-EE-A29D-06A 44 96 In-Frame Intra-chr p13.1 p13.1 Seq+ 103126 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAPER-TSPAN3 SCAPER chr15 76841734 - TSPAN3 chr15 77056255 - Exonic hg38 SKCM TCGA-EE-A29D-06A 42 101 In-Frame Intra-chr q24.3 q24.3 Seq+ 103127 ChimerSeq TCGA FAWG TCGA_RNA-Seq FANCD2-ARPC4 FANCD2 chr3 10028721 + ARPC4 chr3 9800185 + Exonic hg38 SKCM TCGA-EE-A29D-06A 8 18 Out-of-frame Intra-chr p25.3 Oncogene p25.3 Seq+ 103128 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK1-RHOU MARK1 chr1 220653352 + RHOU chr1 228737673 + Exonic hg38 SKCM TCGA-EE-A29D-06A 4 29 CDS-3'UTR Intra-chr q41 CAMK:CAMKL Oncogene q42.13 Seq+ 103129 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM44-CD44 TRIM44 chr11 35735445 + CD44 chr11 35176575 + Exonic hg38 SKCM TCGA-EE-A29D-06A 1 13 Out-of-frame Intra-chr p13 p13 Oncogene Tumor suppressor gene Seq+ 103130 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACROD2-SPTLC3 MACROD2 chr20 14085728 + SPTLC3 chr20 13110112 + Exonic hg38 SKCM TCGA-EE-A29D-06A 2 5 In-Frame Intra-chr p12.1 p12.1 Seq+ 103131 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYM-RPL17 DYM chr18 49460398 - RPL17 chr18 49491584 - Exonic hg38 SKCM TCGA-EE-A29E-06A 3 27 5'UTR-5'UTR Intra-chr q21.1 q21.1 Seq+ 103132 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFAND3-RPTOR ZFAND3 chr6 37820016 + RPTOR chr17 80891720 + Exonic hg38 SKCM TCGA-EE-A29L-06A 9 25 Out-of-frame Inter-chr p21.2 q25.3 Seq+ 103133 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF2-UBAC2 SMURF2 chr17 64583461 - UBAC2 chr13 99314097 + Exonic hg38 SKCM TCGA-EE-A29L-06A 9 24 In-Frame Inter-chr q24.1 q32.3 Seq+ 103134 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICU3-TGFBR3 MICU3 chr8 17027660 + TGFBR3 chr1 91734959 - Exonic hg38 SKCM TCGA-EE-A29L-06A 4 34 In-Frame Inter-chr p22 p22.1 Tumor suppressor gene Seq+ 103135 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP25-SLITRK6 USP25 chr21 15791664 + SLITRK6 chr13 85798986 - Exonic hg38 SKCM TCGA-EE-A29L-06A 3 25 5'UTR-5'UTR Inter-chr q21.1 q31.1 Seq+ 103136 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPTX1-FBXO7 NPTX1 chr17 80475511 - FBXO7 chr22 32479133 + Exonic hg38 SKCM TCGA-EE-A29L-06A 2 10 In-Frame Inter-chr q25.3 q12.3 Seq+ 103137 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHEB-IFNAR1 RHEB chr7 151470571 - IFNAR1 chr21 33335524 + Exonic hg38 SKCM TCGA-EE-A29L-06A 1 5 Out-of-frame Inter-chr q36.1 Oncogene q22.11 103138 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBX1-ZNF442 RBX1 chr22 40967884 + ZNF442 chr19 12353114 - Exonic hg38 SKCM TCGA-EE-A29M-06A 2 8 Out-of-frame Inter-chr q13.2 p13.2 Transcription factor Seq+ 103139 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO5A-FAM214A MYO5A chr15 52375304 - FAM214A chr15 52678122 - Exonic hg38 SKCM TCGA-EE-A29P-06A 1 2 CDS-5'UTR Intra-chr q21.2 q21.3 103140 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKN1-RPLP0 PKN1 chr19 14467967 + RPLP0 chr12 120198739 - Exonic hg38 SKCM TCGA-EE-A29Q-06A 1 1 Out-of-frame Inter-chr p13.12 AGC:PKN q24.23 103141 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERF1B-ANKRD55 SERF1B chr5 70026515 + ANKRD55 chr5 56143929 - Exonic hg38 SKCM TCGA-EE-A29S-06A 3 10 3'UTR-CDS Intra-chr q11.2 103142 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELSR1-CFAP46 CELSR1 chr22 46533627 - CFAP46 chr10 132814914 - Exonic hg38 SKCM TCGA-EE-A29V-06A 38 150 In-Frame Inter-chr q13.31 q26.3 103143 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRFIP2-DEPTOR LRRFIP2 chr3 37174539 - DEPTOR chr8 120049576 + Exonic hg38 SKCM TCGA-EE-A29V-06A 17 85 5'UTR-CDS Inter-chr p22.2 q24.12 Seq+ 103144 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN9-KLRG1 TSPAN9 chr12 3083719 + KLRG1 chr12 9008975 + Exonic hg38 SKCM TCGA-EE-A29V-06A 6 48 5'UTR-5'UTR Intra-chr p13.33 p13.31 Seq+ 103145 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL52-C14orf93 MRPL52 chr14 22830254 + C14orf93 chr14 22999156 - Exonic hg38 SKCM TCGA-EE-A29V-06A 8 28 5'UTR-5'UTR Intra-chr q11.2 q11.2 Seq+ 103146 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPTOR-RAB34 RPTOR chr17 80545791 + RAB34 chr17 28715901 - Exonic hg38 SKCM TCGA-EE-A29V-06A 4 25 Out-of-frame Intra-chr q25.3 q11.2 Seq+ 103147 ChimerSeq TCGA FAWG TCGA_RNA-Seq MID1-C6orf106 MID1 chrX 10620290 - C6orf106 chr6 34654779 - Exonic hg38 SKCM TCGA-EE-A29X-06A 1 17 Out-of-frame Inter-chr p22.2 p21.31 103148 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX29-HS3ST4 SNX29 chr16 12129758 + HS3ST4 chr16 26135612 + Exonic hg38 SKCM TCGA-EE-A29X-06A 2 5 In-Frame Intra-chr p13.13 p12.1 Seq+ 103149 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNGTT-AHI1 RNGTT chr6 88769774 - AHI1 chr6 135285647 - Exonic hg38 SKCM TCGA-EE-A2A0-06A 1 10 In-Frame Intra-chr q15 q23.3 Seq+ 103150 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXNA1-TNK2 PLXNA1 chr3 126991566 + TNK2 chr3 195888606 - Exonic hg38 SKCM TCGA-EE-A2A1-06A 1 1 In-Frame Intra-chr q21.3 q29 Oncogene 103151 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDB2-LRRC9 DDB2 chr11 47217049 + LRRC9 chr14 60063323 + Exonic hg38 SKCM TCGA-EE-A2A6-06A 40 173 Out-of-frame Inter-chr p11.2 Oncogene Tumor suppressor gene q23.1 Seq+ 103152 ChimerSeq TCGA FAWG TCGA_RNA-Seq CALD1-AKR1B10 CALD1 chr7 134891673 + AKR1B10 chr7 134530643 + Exonic hg38 SKCM TCGA-EE-A2A6-06A 3 61 Out-of-frame Intra-chr q33 q33 Seq+ 103153 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAAM1-C12orf10 DAAM1 chr14 59331920 + C12orf10 chr12 53305908 + Exonic hg38 SKCM TCGA-EE-A2A6-06A 5 37 In-Frame Inter-chr q23.1 q13.13 Seq+ 103154 ChimerSeq TCGA FAWG TCGA_RNA-Seq CKAP5-DAAM1 CKAP5 chr11 46821175 - DAAM1 chr14 59331209 + Exonic hg38 SKCM TCGA-EE-A2A6-06A 1 7 In-Frame Inter-chr p11.2 q23.1 Seq+ 103155 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAREM1-PTPRM GAREM1 chr18 32392895 - PTPRM chr18 7888106 + Exonic hg38 SKCM TCGA-EE-A2GB-06A 8 35 In-Frame Intra-chr q12.1 p11.23 103156 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL21B-PIP4K2C METTL21B chr12 57773128 + PIP4K2C chr12 57594025 + Exonic hg38 SKCM TCGA-EE-A2GB-06A 8 32 Out-of-frame Intra-chr q13.3 Seq+ 103157 ChimerSeq TCGA FAWG TCGA_RNA-Seq POMK-LSS POMK chr8 43103830 + LSS chr21 46196267 - Exonic hg38 SKCM TCGA-EE-A2GH-06A 2 8 CDS-5'UTR Inter-chr p11.21 q22.3 Seq+ 103158 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K14-HDAC5 MAP3K14 chr17 45265163 - HDAC5 chr17 44093834 - Exonic hg38 SKCM TCGA-EE-A2GI-06A 1 4 Out-of-frame Intra-chr q21.31 q21.31 103159 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDST1-FAM114A2 NDST1 chr5 150486023 + FAM114A2 chr5 154034967 - Exonic hg38 SKCM TCGA-EE-A2GJ-06A 17 72 5'UTR-5'UTR Intra-chr q33.1 q33.2 Seq+ 103160 ChimerSeq TCGA FAWG TCGA_RNA-Seq LCP2-SLC34A1 LCP2 chr5 170274301 - SLC34A1 chr5 177393694 + Exonic hg38 SKCM TCGA-EE-A2GJ-06A 20 49 In-Frame Intra-chr q35.1 q35.3 Seq+ 103161 ChimerSeq TCGA FAWG TCGA_RNA-Seq BIRC7-ZNF200 BIRC7 chr20 63239610 + ZNF200 chr16 3235360 - Exonic hg38 SKCM TCGA-EE-A2GK-06A 2 12 3'UTR-5'UTR Inter-chr q13.33 p13.3 Transcription factor Seq+ 103162 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIVEP3-C1orf168 HIVEP3 chr1 42035807 - C1orf168 chr1 56767938 - Exonic hg38 SKCM TCGA-EE-A2GL-06A 2 11 Out-of-frame Intra-chr p34.2 Tumor suppressor gene Transcription factor p32.2 Seq+ 103163 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABR-YWHAE ABR chr17 1179667 - YWHAE chr17 1365058 - Exonic hg38 SKCM TCGA-EE-A2GN-06A 1 1 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 103164 ChimerSeq TCGA FAWG TCGA_RNA-Seq C6orf62-MRS2 C6orf62 chr6 24714318 - MRS2 chr6 24423584 + Exonic hg38 SKCM TCGA-EE-A2GP-06A 22 78 In-Frame Intra-chr p22.3 p22.3 Seq+ 103165 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRS2-C6orf62 MRS2 chr6 24423050 + C6orf62 chr6 24708911 - Exonic hg38 SKCM TCGA-EE-A2GP-06A 3 79 In-Frame Intra-chr p22.3 p22.3 Seq+ 103166 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP1A1-ATG4C ATP1A1 chr1 116373523 + ATG4C chr1 62863992 + Exonic hg38 SKCM TCGA-EE-A2GP-06A 12 33 In-Frame Intra-chr p13.1 p31.3 Seq+ 103167 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP39-REEP1 USP39 chr2 85619289 + REEP1 chr2 86282242 - Exonic hg38 SKCM TCGA-EE-A2GP-06A 3 3 In-Frame Intra-chr p11.2 p11.2 Seq+ 103168 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBF2-CNTN5 SBF2 chr11 10193902 - CNTN5 chr11 100191126 + Exonic hg38 SKCM TCGA-EE-A2GR-06A 8 25 Out-of-frame Intra-chr p15.4 q22.1 Seq+ 103169 ChimerSeq TCGA FAWG TCGA_RNA-Seq TATDN2-IRAK2 TATDN2 chr3 10271015 + IRAK2 chr3 10238748 + Exonic hg38 SKCM TCGA-EE-A2GR-06A 3 30 In-Frame Intra-chr p25.3 p25.3 TKL:IRAK Seq+ 103170 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARRB1-PRCP ARRB1 chr11 75351588 - PRCP chr11 82838574 - Exonic hg38 SKCM TCGA-EE-A2GR-06A 1 21 Out-of-frame Intra-chr q13.4 q14.1 Seq+ 103171 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAN1A2-ZNF697 MAN1A2 chr1 117368485 + ZNF697 chr1 119626137 - Exonic hg38 SKCM TCGA-EE-A2GR-06A 1 5 CDS-5'UTR Intra-chr p12 p12 Transcription factor 103172 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD9A-CLPB RAD9A chr11 67392078 + CLPB chr11 72430363 - Exonic hg38 SKCM TCGA-EE-A2GR-06A 1 3 In-Frame Intra-chr q13.2 q13.4 Seq+ 103173 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53-CHD3 TP53 chr17 7687377 - CHD3 chr17 7895339 + Exonic hg38 SKCM TCGA-EE-A2GU-06A 34 182 5'UTR-CDS Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p13.1 Seq+ 103174 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRS-TMEM8A PTPRS chr19 5293141 - TMEM8A chr16 384396 - Exonic hg38 SKCM TCGA-EE-A2GU-06A 17 56 Out-of-frame Inter-chr p13.3 p13.3 Seq+ 103175 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBMS1-ORC4 RBMS1 chr2 160367216 - ORC4 chr2 147943522 - Exonic hg38 SKCM TCGA-EE-A2GU-06A 12 74 Out-of-frame Intra-chr q24.2 q23.1 Seq+ 103176 ChimerSeq TCGA FAWG TCGA_RNA-Seq ORC4-MAPK4 ORC4 chr2 147952373 - MAPK4 chr18 50729158 + Exonic hg38 SKCM TCGA-EE-A2GU-06A 11 26 Out-of-frame Inter-chr q23.1 q21.1 Seq+ 103177 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNIK-STXBP5L TNIK chr3 171084155 - STXBP5L chr3 121378716 + Exonic hg38 SKCM TCGA-EE-A2M6-06A 1 13 In-Frame Intra-chr q26.31 STE:STE20 q13.33 Seq+ 103178 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD4B-DAZL FRMD4B chr3 69542206 - DAZL chr3 16598598 - Exonic hg38 SKCM TCGA-EE-A2M6-06A 1 8 5'UTR-5'UTR Intra-chr p14.1 p24.3 103179 ChimerSeq TCGA FAWG TCGA_RNA-Seq NMNAT3-PLA1A NMNAT3 chr3 139627616 - PLA1A chr3 119618019 + Exonic hg38 SKCM TCGA-EE-A2M6-06A 2 4 In-Frame Intra-chr q23 q13.33 Seq+ 103180 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM248-SBDS TMEM248 chr7 66951135 + SBDS chr7 66995390 - Exonic hg38 SKCM TCGA-EE-A2M7-06A 20 255 Out-of-frame Intra-chr q11.21 q11.21 Oncogene Seq+ 103181 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGAT4B-ETF1 MGAT4B chr5 179806487 - ETF1 chr5 138518867 - Exonic hg38 SKCM TCGA-EE-A2M7-06A 11 51 5'UTR-5'UTR Intra-chr q31.2 Seq+ 103182 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF145-PDE4D RNF145 chr5 159169679 - PDE4D chr5 59215968 - Exonic hg38 SKCM TCGA-EE-A2M7-06A 5 43 In-Frame Intra-chr q33.3 q12.1 Seq+ 103183 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGAM2-TTC26 MGAM2 chr7 142159343 + TTC26 chr7 139165132 + Exonic hg38 SKCM TCGA-EE-A2M7-06A 6 16 3'UTR-CDS Intra-chr q34 103184 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRIA1-RAD17 GRIA1 chr5 153706067 + RAD17 chr5 69381901 + Exonic hg38 SKCM TCGA-EE-A2M7-06A 2 16 CDS-3'UTR Intra-chr q33.2 Seq+ 103185 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCP2-STXBP3 SCP2 chr1 53015043 + STXBP3 chr1 108793582 + Exonic hg38 SKCM TCGA-EE-A2M8-06A 4 23 Out-of-frame Intra-chr p32.3 p13.3 Seq+ 103186 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMB7-PID1 PSMB7 chr9 124384598 - PID1 chr2 229026108 - Exonic hg38 SKCM TCGA-EE-A2MC-06A 49 88 In-Frame Inter-chr q33.3 q36.3 Seq+ 103187 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSEN1-STK4 PSEN1 chr14 73198129 + STK4 chr20 45075018 + Exonic hg38 SKCM TCGA-EE-A2MC-06A 3 33 Out-of-frame Inter-chr q24.2 q13.12 Seq+ 103188 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKAA2-USP24 PRKAA2 chr1 56645481 + USP24 chr1 55075523 - Exonic hg38 SKCM TCGA-EE-A2MD-06A 4 15 Out-of-frame Intra-chr p32.2 Tumor suppressor gene p32.3 Seq+ 103189 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK1E-PHF5A CSNK1E chr22 38314082 - PHF5A chr22 41468147 - Exonic hg38 SKCM TCGA-EE-A2ME-06A 34 86 In-Frame Intra-chr q13.1 q13.2 Seq+ 103190 ChimerSeq TCGA FAWG TCGA_RNA-Seq CENPM-SNU13 CENPM chr22 41943610 - SNU13 chr22 41680364 - Exonic hg38 SKCM TCGA-EE-A2ME-06A 13 160 In-Frame Intra-chr q13.2 q13.2 103191 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D22A-ARFGAP3 TBC1D22A chr22 46762848 + ARFGAP3 chr22 42799160 - Exonic hg38 SKCM TCGA-EE-A2ME-06A 5 23 Out-of-frame Intra-chr q13.31 q13.2 Seq+ 103192 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACO2-C1QTNF7 ACO2 chr22 41469182 + C1QTNF7 chr4 15435736 + Exonic hg38 SKCM TCGA-EE-A2ME-06A 2 1 5'UTR-5'UTR Inter-chr q13.2 p15.32 103193 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANGAP1-FAM53A RANGAP1 chr22 41280933 - FAM53A chr4 1641607 - Exonic hg38 SKCM TCGA-EE-A2ME-06A 1 5 In-Frame Inter-chr q13.2 p16.3 103194 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENTHD1-RNF212 ENTHD1 chr22 39861765 - RNF212 chr4 1073662 - Exonic hg38 SKCM TCGA-EE-A2ME-06A 1 4 Out-of-frame Inter-chr q13.1 p16.3 Seq+ 103195 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP5L-AHCYL2 ATP5L chr11 118401717 + AHCYL2 chr7 129379641 + Exonic hg38 SKCM TCGA-EE-A2MF-06A 61 237 Out-of-frame Inter-chr q23.3 q32.1 Seq+ 103196 ChimerSeq TCGA FAWG TCGA_RNA-Seq PNPLA6-ATP13A1 PNPLA6 chr19 7543084 + ATP13A1 chr19 19645532 - Exonic hg38 SKCM TCGA-EE-A2MG-06A 33 333 In-Frame Intra-chr p13.2 p13.11 Seq+ 103197 ChimerSeq TCGA FAWG TCGA_RNA-Seq VAPB-PKIA VAPB chr20 58389517 + PKIA chr8 78572811 + Exonic hg38 SKCM TCGA-EE-A2MH-06A 6 31 5'UTR-5'UTR Inter-chr q13.32 q21.13 Seq+ 103198 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWP1-ZNF704 WWP1 chr8 86402203 + ZNF704 chr8 80821615 - Exonic hg38 SKCM TCGA-EE-A2MH-06A 6 8 Out-of-frame Intra-chr q21.3 q21.13 Transcription factor Seq+ 103199 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFATC2-PHACTR3 NFATC2 chr20 51432067 - PHACTR3 chr20 59845189 + Exonic hg38 SKCM TCGA-EE-A2MH-06A 3 11 Out-of-frame Intra-chr q13.2 Tumor suppressor gene Transcription factor q13.32 Seq+ 103200 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAU2-OSBPL2 STAU2 chr8 73595166 - OSBPL2 chr20 62256057 + Exonic hg38 SKCM TCGA-EE-A2MH-06A 3 6 CDS-5'UTR Inter-chr q21.11 q13.33 Seq+ 103201 ChimerSeq TCGA FAWG TCGA_RNA-Seq RB1CC1-SNX16 RB1CC1 chr8 52656008 - SNX16 chr8 81823940 - Exonic hg38 SKCM TCGA-EE-A2MH-06A 1 13 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q21.13 Seq+ 103202 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCMTD1-SLCO5A1 PCMTD1 chr8 51845661 - SLCO5A1 chr8 69761875 - Exonic hg38 SKCM TCGA-EE-A2MH-06A 2 7 Out-of-frame Intra-chr q11.23 q13.3 Seq+ 103203 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFATC2-DOK5 NFATC2 chr20 51516784 - DOK5 chr20 54554933 + Exonic hg38 SKCM TCGA-EE-A2MH-06A 1 3 In-Frame Intra-chr q13.2 Tumor suppressor gene Transcription factor q13.2 Seq+ 103204 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASSF3-TBK1 RASSF3 chr12 64610743 + TBK1 chr12 64495483 + Exonic hg38 SKCM TCGA-EE-A2MH-06A 1 1 In-Frame Intra-chr q14.2 Tumor suppressor gene q14.2 Other:IKK Seq+ 103205 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAK1-RAF1 TRAK1 chr3 42193898 + RAF1 chr3 12600415 - Exonic hg38 SKCM TCGA-EE-A2MI-06A 22 102 In-Frame Intra-chr p22.1 p25.2 TKL:RAF Oncogene Seq+ 103206 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAF1-TRAK1 RAF1 chr3 12604136 - TRAK1 chr3 42194804 + Exonic hg38 SKCM TCGA-EE-A2MI-06A 21 76 In-Frame Intra-chr p25.2 TKL:RAF Oncogene p22.1 Seq+ 103207 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSH2-VSIR SSH2 chr17 29929938 - VSIR chr10 71762026 - Exonic hg38 SKCM TCGA-EE-A2MI-06A 8 25 Out-of-frame Inter-chr q11.2 q22.1 103208 ChimerSeq TCGA FAWG TCGA_RNA-Seq AEBP1-CSRP1 AEBP1 chr7 44107931 + CSRP1 chr1 201507123 - Exonic hg38 SKCM TCGA-EE-A2MK-06A 1 6 3'UTR-5'UTR Inter-chr p13 Transcription factor q32.1 103209 ChimerSeq TCGA FAWG TCGA_RNA-Seq RXRG-FAM78B RXRG chr1 165417041 - FAM78B chr1 166070763 - Exonic hg38 SKCM TCGA-EE-A2ML-06A 4 14 Out-of-frame Intra-chr q23.3 Transcription factor q24.1 Seq+ 103210 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR181A1HG-CDC42BPA MIR181A1HG chr1 198937226 - CDC42BPA chr1 227091991 - Exonic hg38 SKCM TCGA-EE-A2ML-06A 4 7 3'UTR-CDS Intra-chr q32.1 q42.13 103211 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6C-DENND1A PPP6C chr9 125171090 - DENND1A chr9 123523293 - Exonic hg38 SKCM TCGA-EE-A2MM-06A 3 13 Out-of-frame Intra-chr q33.3 q33.3 Seq+ 103212 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR1OP2-TEC FGFR1OP2 chr12 26938710 + TEC chr4 48156734 - Exonic hg38 SKCM TCGA-EE-A2MM-06A 1 14 5'UTR-CDS Inter-chr p11.23 p11 TK:Tec Tumor suppressor gene Seq+ 103213 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM192A-CES2 FAM192A chr16 57173728 - CES2 chr16 66938037 + Exonic hg38 SKCM TCGA-EE-A2MM-06A 1 3 In-Frame Intra-chr q13 q22.1 103214 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH11-KIFC3 CDH11 chr16 64948609 - KIFC3 chr16 57761536 - Exonic hg38 SKCM TCGA-EE-A2MN-06A 5 32 Out-of-frame Intra-chr q21 Oncogene Tumor suppressor gene q21 Seq+ 103215 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR59-KIFC3 WDR59 chr16 74984964 - KIFC3 chr16 57761171 - Exonic hg38 SKCM TCGA-EE-A2MN-06A 4 19 In-Frame Intra-chr q23.1 q21 Seq+ 103216 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR59-CDH11 WDR59 chr16 74984964 - CDH11 chr16 64948787 - Exonic hg38 SKCM TCGA-EE-A2MN-06A 6 8 Out-of-frame Intra-chr q23.1 q21 Oncogene Tumor suppressor gene Seq+ 103217 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCGF5-RNLS PCGF5 chr10 91264520 + RNLS chr10 88573061 - Exonic hg38 SKCM TCGA-EE-A2MP-06A 1 3 Out-of-frame Intra-chr q23.32 q23.31 Seq+ 103218 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNA1C-DERA CACNA1C chr12 2512984 + DERA chr12 15956936 + Exonic hg38 SKCM TCGA-EE-A2MR-06A 18 48 3'UTR-CDS Intra-chr p13.33 p12.3 Seq+ 103219 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACAP2-OT ACAP2 chr3 195333028 - OT chr3 181790673 + Exonic hg38 SKCM TCGA-EE-A2MR-06A 9 49 Out-of-frame Intra-chr q29 103220 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSK-TMEM266 CSK chr15 74782720 + TMEM266 chr15 76134168 + Exonic hg38 SKCM TCGA-EE-A2MR-06A 5 34 5'UTR-5'UTR Intra-chr q24.1 TK:Csk q24.2 103221 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF609-3HG ZNF609 chr15 64680862 + 3HG chr15 89388501 + Exonic hg38 SKCM TCGA-EE-A2MR-06A 4 17 Out-of-frame Intra-chr q22.31 Transcription factor 103222 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTPBP2-USP49 GTPBP2 chr6 43625756 - USP49 chr6 41798929 - Exonic hg38 SKCM TCGA-EE-A2MR-06A 2 5 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 103223 ChimerSeq TCGA FAWG TCGA_RNA-Seq KHDRBS3-ANXA13 KHDRBS3 chr8 135457954 + ANXA13 chr8 123702736 - Exonic hg38 SKCM TCGA-EE-A2MR-06A 1 3 In-Frame Intra-chr q24.23 q24.13 Seq+ 103224 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC17-GLIPR1L1 ZDHHC17 chr12 76764329 + GLIPR1L1 chr12 75363102 + Exonic hg38 SKCM TCGA-EE-A2MS-06A 57 125 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 103225 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM2-INHBE R3HDM2 chr12 57266731 - INHBE chr12 57455744 + Exonic hg38 SKCM TCGA-EE-A2MS-06A 15 133 In-Frame Intra-chr q13.3 q13.3 Seq+ 103226 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERGIC1-ADGRV1 ERGIC1 chr5 172932536 + ADGRV1 chr5 90788071 + Exonic hg38 SKCM TCGA-EE-A2MS-06A 17 74 In-Frame Intra-chr q35.1 q14.3 103227 ChimerSeq TCGA FAWG TCGA_RNA-Seq LYST-NID1 LYST chr1 235787200 - NID1 chr1 236048989 - Exonic hg38 SKCM TCGA-EE-A2MS-06A 14 79 Out-of-frame Intra-chr q42.3 q42.3 Seq+ 103228 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3KBP1-VSIG1 SH3KBP1 chrX 19836125 - VSIG1 chrX 108058038 + Exonic hg38 SKCM TCGA-EE-A2MS-06A 17 37 Out-of-frame Intra-chr p22.12 q22.3 Seq+ 103229 ChimerSeq TCGA FAWG TCGA_RNA-Seq DMXL2-PTPRR DMXL2 chr15 51622459 - PTPRR chr12 70764778 - Exonic hg38 SKCM TCGA-EE-A2MS-06A 4 23 In-Frame Inter-chr q21.2 q15 Seq+ 103230 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRR-C12orf54 PTPRR chr12 70764665 - C12orf54 chr12 48486688 + Exonic hg38 SKCM TCGA-EE-A2MS-06A 3 27 In-Frame Intra-chr q15 q13.11 Seq+ 103231 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM117-MCRS1 TMEM117 chr12 43844928 + MCRS1 chr12 49566215 - Exonic hg38 SKCM TCGA-EE-A2MS-06A 3 6 In-Frame Intra-chr q12 q13.12 Seq+ 103232 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARL16-RAB37 ARL16 chr17 81683536 - RAB37 chr17 74729256 + Exonic hg38 SKCM TCGA-EE-A2MS-06A 2 9 In-Frame Intra-chr q25.3 q25.1 Seq+ 103233 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARD3-FAM83B PARD3 chr10 34814876 - FAM83B chr6 54870187 + Exonic hg38 SKCM TCGA-EE-A2MS-06A 1 7 CDS-5'UTR Inter-chr p11.21 p12.1 Seq+ 103234 ChimerSeq TCGA FAWG TCGA_RNA-Seq UQCRH-TSPAN1 UQCRH chr1 46309127 + TSPAN1 chr1 46184191 + Exonic hg38 SKCM TCGA-EE-A2MS-06A 1 7 In-Frame Intra-chr p33 p34.1 103235 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIPE-CEACAM1 LIPE chr19 42423419 - CEACAM1 chr19 42512479 - Exonic hg38 SKCM TCGA-EE-A2MS-06A 2 1 Out-of-frame Intra-chr q13.2 q13.2 Tumor suppressor gene 103236 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX17-CPT1B DDX17 chr22 38498085 - CPT1B chr22 50572122 - Exonic hg38 SKCM TCGA-EE-A2MU-06A 7 22 In-Frame Intra-chr q13.1 q13.33 Seq+ 103237 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNB1-CASZ1 GNB1 chr1 1890820 - CASZ1 chr1 10705544 - Exonic hg38 SKCM TCGA-EE-A3AA-06A 8 8 5'UTR-5'UTR Intra-chr p36.33 p36.22 Transcription factor Seq+ 103238 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCBLD1-NUS1 DCBLD1 chr6 117503979 + NUS1 chr6 117693042 + Exonic hg38 SKCM TCGA-EE-A3AB-06A 1 6 In-Frame Intra-chr q22.1 q22.1 103239 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHC1-IQGAP3 SHC1 chr1 154968204 - IQGAP3 chr1 156529082 - Exonic hg38 SKCM TCGA-EE-A3AD-06A 127 243 In-Frame Intra-chr q21.3 q22 Seq+ 103240 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTGIS-IFT52 PTGIS chr20 49539570 - IFT52 chr20 43604183 + Exonic hg38 SKCM TCGA-EE-A3AD-06A 13 44 In-Frame Intra-chr q13.13 q13.12 Seq+ 103241 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOL4L-EFCAB8 NOL4L chr20 32456118 - EFCAB8 chr20 32906843 + Exonic hg38 SKCM TCGA-EE-A3AG-06A 1 29 Out-of-frame Intra-chr q11.21 q11.21 103242 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMBR1-KIAA0825 LMBR1 chr7 156796389 - KIAA0825 chr5 94537127 - Exonic hg38 SKCM TCGA-EE-A3AG-06A 2 9 5'UTR-5'UTR Inter-chr q36.3 q15 Seq+ 103243 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPATS2L-KCTD18 SPATS2L chr2 200329480 + KCTD18 chr2 200493274 - Exonic hg38 SKCM TCGA-EE-A3AG-06A 1 9 Out-of-frame Intra-chr q33.1 q33.1 103244 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC90B-DLG2 CCDC90B chr11 83285873 - DLG2 chr11 83874488 - Exonic hg38 SKCM TCGA-EE-A3AG-06A 2 4 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 103245 ChimerSeq TCGA FAWG TCGA_RNA-Seq HEATR5B-NCALD HEATR5B chr2 37053502 - NCALD chr8 101692896 - Exonic hg38 SKCM TCGA-EE-A3AG-06A 2 4 In-Frame Inter-chr p22.2 q22.3 Seq+ 103246 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIFAP3-COPA KIFAP3 chr1 169954011 - COPA chr1 160314125 - Exonic hg38 SKCM TCGA-EE-A3AH-06A 2 4 Out-of-frame Intra-chr q24.2 q23.2 Seq+ 103247 ChimerSeq TCGA FAWG TCGA_RNA-Seq PACSIN2-SGSM3 PACSIN2 chr22 42959799 - SGSM3 chr22 40400696 + Exonic hg38 SKCM TCGA-EE-A3AH-06A 1 1 5'UTR-5'UTR Intra-chr q13.2 q13.1 103248 ChimerSeq TCGA FAWG TCGA_RNA-Seq PACSIN2-EEFSEC PACSIN2 chr22 42946897 - EEFSEC chr3 128408069 + Exonic hg38 SKCM TCGA-EE-A3J4-06A 2 10 5'UTR-3'UTR Inter-chr q13.2 q21.3 Seq+ 103249 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF157-RHBDF2 RNF157 chr17 76212364 - RHBDF2 chr17 76487909 - Exonic hg38 SKCM TCGA-EE-A3J4-06A 2 3 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 103250 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM5B-RASAL2 KDM5B chr1 202808102 - RASAL2 chr1 178420511 + Exonic hg38 SKCM TCGA-EE-A3J5-06A 1 4 In-Frame Intra-chr q32.1 Transcription factor q25.2 Tumor suppressor gene Seq+ 103251 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A36-CLSTN2 SLC25A36 chr3 140963227 + CLSTN2 chr3 140175951 + Exonic hg38 SKCM TCGA-EE-A3J7-06A 13 79 In-Frame Intra-chr q23 q23 Seq+ 103252 ChimerSeq TCGA FAWG TCGA_RNA-Seq CFL1-LRRC41 CFL1 chr11 65858097 - LRRC41 chr1 46286499 - Exonic hg38 SKCM TCGA-EE-A3JB-06A 39 108 In-Frame Inter-chr q13.1 p33 Seq+ 103253 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL16A1-TSGA10IP COL16A1 chr1 31662334 - TSGA10IP chr11 65946880 + Exonic hg38 SKCM TCGA-EE-A3JB-06A 6 58 In-Frame Inter-chr p35.2 q13.1 Seq+ 103254 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBNL1-CPHL1P MBNL1 chr3 152269092 + CPHL1P chr3 149247496 - Exonic hg38 SKCM TCGA-EE-A3JB-06A 5 18 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 103255 ChimerSeq TCGA FAWG TCGA_RNA-Seq HPS3-P2RY14 HPS3 chr3 149129940 + P2RY14 chr3 151219642 - Exonic hg38 SKCM TCGA-EE-A3JB-06A 1 3 CDS-5'UTR Intra-chr q24 q25.1 103256 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF644-DPYD ZNF644 chr1 91021990 - DPYD chr1 97234994 - Exonic hg38 SKCM TCGA-EE-A3JH-06A 12 4 5'UTR-CDS Intra-chr p22.2 Transcription factor p21.3 Oncogene Seq+ 103257 ChimerSeq TCGA FAWG TCGA_RNA-Seq FARS2-SYCP2L FARS2 chr6 5261660 + SYCP2L chr6 10930370 + Exonic hg38 SKCM TCGA-EE-A3JI-06A 6 60 5'UTR-CDS Intra-chr p25.1 p24.2 Seq+ 103258 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDYL-EEF1E1 CDYL chr6 4892379 + EEF1E1 chr6 8097467 - Exonic hg38 SKCM TCGA-EE-A3JI-06A 8 41 Out-of-frame Intra-chr p25.1 p24.3 Tumor suppressor gene Seq+ 103259 ChimerSeq TCGA FAWG TCGA_RNA-Seq LYRM4-PHACTR1 LYRM4 chr6 5260648 - PHACTR1 chr6 13278268 + Exonic hg38 SKCM TCGA-EE-A3JI-06A 2 15 Out-of-frame Intra-chr p25.1 Seq+ 103260 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTK2B-ICA1L PTK2B chr8 27420073 + ICA1L chr2 202829016 - Exonic hg38 SKCM TCGA-EE-A3JI-06A 1 4 CDS-5'UTR Inter-chr p21.2 q33.2 Seq+ 103261 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIP2B-BCAT1 DIP2B chr12 50505240 + BCAT1 chr12 24829897 - Exonic hg38 SKCM TCGA-ER-A193-06A 25 98 Out-of-frame Intra-chr q13.12 p12.1 Seq+ 103262 ChimerSeq TCGA FAWG TCGA_RNA-Seq TULP3-PRMT8 TULP3 chr12 2890988 + PRMT8 chr12 3568706 + Exonic hg38 SKCM TCGA-ER-A193-06A 14 45 Out-of-frame Intra-chr p13.33 p13.32 Seq+ 103263 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMBIM6-FKBP11 TMBIM6 chr12 49741611 + FKBP11 chr12 48925678 - Exonic hg38 SKCM TCGA-ER-A193-06A 6 39 5'UTR-5'UTR Intra-chr q13.12 q13.12 103264 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM117-UBC TMEM117 chr12 44376724 + UBC chr12 124913774 - Exonic hg38 SKCM TCGA-ER-A193-06A 5 35 CDS-5'UTR Intra-chr q12 q24.31 Seq+ 103265 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST8SIA1-AEBP2 ST8SIA1 chr12 22249006 - AEBP2 chr12 19512398 + Exonic hg38 SKCM TCGA-ER-A193-06A 7 11 Out-of-frame Intra-chr p12.1 p12.3 Transcription factor Seq+ 103266 ChimerSeq TCGA FAWG TCGA_RNA-Seq AEBP2-ST8SIA1 AEBP2 chr12 19500221 + ST8SIA1 chr12 22202038 - Exonic hg38 SKCM TCGA-ER-A193-06A 1 27 Out-of-frame Intra-chr p12.3 Transcription factor p12.1 Seq+ 103267 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSP2-ARHGAP9 CTDSP2 chr12 57846372 - ARHGAP9 chr12 57480834 - Exonic hg38 SKCM TCGA-ER-A193-06A 2 14 CDS-5'UTR Intra-chr q14.1 q13.3 103268 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXT2-ALKBH3 EXT2 chr11 44114301 + ALKBH3 chr11 43919038 + Exonic hg38 SKCM TCGA-ER-A194-01A 2 36 Out-of-frame Intra-chr p11.2 Oncogene Tumor suppressor gene p11.2 Seq+ 103269 ChimerSeq TCGA FAWG TCGA_RNA-Seq APC-NREP APC chr5 112707882 + NREP chr5 111735507 - Exonic hg38 SKCM TCGA-ER-A195-06A 12 51 In-Frame Intra-chr q22.2 Oncogene Tumor suppressor gene q22.1 Seq+ 103270 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD1-POLK CHD1 chr5 98928539 - POLK chr5 75552472 + Exonic hg38 SKCM TCGA-ER-A195-06A 1 34 5'UTR-5'UTR Intra-chr q21.1 Tumor suppressor gene q13.3 103271 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF615-SLC17A7 ZNF615 chr19 52008141 - SLC17A7 chr19 49432960 - Exonic hg38 SKCM TCGA-ER-A195-06A 1 7 In-Frame Intra-chr q13.41 Transcription factor q13.33 103272 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELF2-MALRD1 CELF2 chr10 11165682 + MALRD1 chr10 19048959 + Exonic hg38 SKCM TCGA-ER-A196-01A 57 178 Out-of-frame Intra-chr p14 p12.31 103273 ChimerSeq TCGA FAWG TCGA_RNA-Seq APBB1IP-DNAJC1 APBB1IP chr10 26541692 + DNAJC1 chr10 21929141 - Exonic hg38 SKCM TCGA-ER-A196-01A 22 54 In-Frame Intra-chr p12.1 p12.31 Seq+ 103274 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD4A-APBB1IP FRMD4A chr10 13674911 - APBB1IP chr10 26511747 + Exonic hg38 SKCM TCGA-ER-A196-01A 13 60 In-Frame Intra-chr p13 p12.1 Seq+ 103275 ChimerSeq TCGA FAWG TCGA_RNA-Seq VAC14-CDH8 VAC14 chr16 70731495 - CDH8 chr16 61901473 - Exonic hg38 SKCM TCGA-ER-A196-01A 9 36 Out-of-frame Intra-chr q22.2 q21 Seq+ 103276 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSTF1-BLM CSTF1 chr20 56392713 + BLM chr15 90809137 + Exonic hg38 SKCM TCGA-ER-A196-01A 6 25 5'UTR-CDS Inter-chr q13.2 q26.1 Oncogene Tumor suppressor gene Seq+ 103277 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADNP-BMP7 ADNP chr20 50930826 - BMP7 chr20 57228421 - Exonic hg38 SKCM TCGA-ER-A196-01A 9 5 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.31 Seq+ 103278 ChimerSeq TCGA FAWG TCGA_RNA-Seq PFKFB3-ZNF831 PFKFB3 chr10 6217191 + ZNF831 chr20 59252978 + Exonic hg38 SKCM TCGA-ER-A196-01A 3 23 Out-of-frame Inter-chr p15.1 q13.32 Transcription factor Seq+ 103279 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYM-TMC7 DYM chr18 49257010 - TMC7 chr16 19040289 + Exonic hg38 SKCM TCGA-ER-A196-01A 3 16 Out-of-frame Inter-chr q21.1 p12.3 Seq+ 103280 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWP2-ZNF629 WWP2 chr16 69787080 + ZNF629 chr16 30784515 - Exonic hg38 SKCM TCGA-ER-A196-01A 1 3 CDS-5'UTR Intra-chr q22.1 p11.2 Transcription factor Seq+ 103281 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUMB-SLC39A9 NUMB chr14 73409937 - SLC39A9 chr14 69424094 + Exonic hg38 SKCM TCGA-ER-A196-01A 1 2 5'UTR-5'UTR Intra-chr q24.3 Tumor suppressor gene q24.1 103282 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD2-ACSBG1 CHD2 chr15 92901299 + ACSBG1 chr15 78173839 - Exonic hg38 SKCM TCGA-ER-A197-06A 38 92 Out-of-frame Intra-chr q26.1 q25.1 Seq+ 103283 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCAT-GTSE1 MCAT chr22 43137081 - GTSE1 chr22 46312141 + Exonic hg38 SKCM TCGA-ER-A197-06A 26 101 In-Frame Intra-chr q13.2 q13.31 Seq+ 103284 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAFAH1B1-CTDNEP1 PAFAH1B1 chr17 2594006 + CTDNEP1 chr17 7247343 - Exonic hg38 SKCM TCGA-ER-A197-06A 10 66 5'UTR-CDS Intra-chr p13.3 Tumor suppressor gene p13.1 Seq+ 103285 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D2B-LUC7L2 TBC1D2B chr15 77998187 - LUC7L2 chr7 139398599 + Exonic hg38 SKCM TCGA-ER-A197-06A 6 63 Out-of-frame Inter-chr q25.1 q34 Seq+ 103286 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSA2-PCDHA13 NSA2 chr5 74767363 + PCDHA13 chr5 140978949 + Exonic hg38 SKCM TCGA-ER-A197-06A 4 69 In-Frame Intra-chr q13.3 q31.3 Seq+ 103287 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSA2-PCDHAC1 NSA2 chr5 74767363 + PCDHAC1 chr5 140978949 + Exonic hg38 SKCM TCGA-ER-A197-06A 4 69 In-Frame Intra-chr q13.3 q31.3 Seq+ 103288 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSA2-PCDHAC2 NSA2 chr5 74767363 + PCDHAC2 chr5 140978949 + Exonic hg38 SKCM TCGA-ER-A197-06A 4 69 In-Frame Intra-chr q13.3 q31.3 Seq+ 103289 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZEB2-AKT3 ZEB2 chr2 144424796 - AKT3 chr1 243545597 - Exonic hg38 SKCM TCGA-ER-A197-06A 11 34 CDS-5'UTR Inter-chr q22.3 Transcription factor AGC:Akt Oncogene Seq+ 103290 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEX41-GRM1 TEX41 chr2 145172131 + GRM1 chr6 146027648 + Exonic hg38 SKCM TCGA-ER-A197-06A 8 45 Out-of-frame Inter-chr q22.3 q24.3 103291 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDCCAG8-TFB2M SDCCAG8 chr1 243274656 + TFB2M chr1 246551302 - Exonic hg38 SKCM TCGA-ER-A197-06A 14 18 3'UTR-CDS Intra-chr q44 Seq+ 103292 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAP1B-SNUPN RAP1B chr12 68611043 + SNUPN chr15 75605227 - Exonic hg38 SKCM TCGA-ER-A197-06A 2 61 5'UTR-CDS Inter-chr q15 q24.2 Seq+ 103293 ChimerSeq TCGA FAWG TCGA_RNA-Seq TJP1-SLC20A1 TJP1 chr15 29822002 - SLC20A1 chr2 112647653 + Exonic hg38 SKCM TCGA-ER-A197-06A 7 40 5'UTR-CDS Inter-chr q14.1 Seq+ 103294 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGFBP7-SPATA22 IGFBP7 chr4 57040824 - SPATA22 chr17 3446601 - Exonic hg38 SKCM TCGA-ER-A197-06A 11 20 In-Frame Inter-chr q12 Tumor suppressor gene p13.2 Seq+ 103295 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTMR3-MB MTMR3 chr22 29883359 + MB chr22 35637208 - Exonic hg38 SKCM TCGA-ER-A197-06A 9 16 5'UTR-5'UTR Intra-chr q12.2 q12.3 Seq+ 103296 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDGFA-OCA2 PDGFA chr7 517394 - OCA2 chr15 28032163 - Exonic hg38 SKCM TCGA-ER-A197-06A 4 34 CDS-5'UTR Inter-chr p22.3 q13.1 Seq+ 103297 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACVR1-CDK4 ACVR1 chr2 157875796 - CDK4 chr12 57751736 - Exonic hg38 SKCM TCGA-ER-A197-06A 6 21 5'UTR-5'UTR Inter-chr q24.1 q14.1 CMGC:CDK Oncogene Seq+ 103298 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCKAP5-ARHGAP15 NCKAP5 chr2 133213716 - ARHGAP15 chr2 143487373 + Exonic hg38 SKCM TCGA-ER-A197-06A 7 12 Out-of-frame Intra-chr q21.2 q22.2 Seq+ 103299 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1B-RCN2 ARID1B chr6 156829421 + RCN2 chr15 76932361 + Exonic hg38 SKCM TCGA-ER-A197-06A 2 30 In-Frame Inter-chr q25.3 Oncogene q24.3 Seq+ 103300 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKT3-PTPRR AKT3 chr1 243613671 - PTPRR chr12 70684264 - Exonic hg38 SKCM TCGA-ER-A197-06A 5 17 5'UTR-CDS Inter-chr AGC:Akt Oncogene q15 Seq+ 103301 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL22-SMCR2 KLHL22 chr22 20488985 - SMCR2 chr17 17675522 - Exonic hg38 SKCM TCGA-ER-A197-06A 1 32 3'UTR-3'UTR Inter-chr q11.21 p11.2 103302 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLD5-PLA2R1 PLD5 chr1 242524088 - PLA2R1 chr2 159949776 - Exonic hg38 SKCM TCGA-ER-A197-06A 3 18 In-Frame Inter-chr q43 q24.2 Tumor suppressor gene Seq+ 103303 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNST-LNX1 CNST chr1 246591941 + LNX1 chr4 53507469 - Exonic hg38 SKCM TCGA-ER-A197-06A 4 13 In-Frame Inter-chr q44 q12 Seq+ 103304 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGFBP7-CNST IGFBP7 chr4 57040824 - CNST chr1 246591512 + Exonic hg38 SKCM TCGA-ER-A197-06A 4 12 CDS-5'UTR Inter-chr q12 Tumor suppressor gene q44 Seq+ 103305 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITCH-CFAP47 ITCH chr20 34369470 + CFAP47 chrX 36188620 + Exonic hg38 SKCM TCGA-ER-A197-06A 3 16 5'UTR-CDS Inter-chr q11.22 p21.1 103306 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB49-SLC23A2 ZBTB49 chr4 4290352 + SLC23A2 chr20 4970915 - Exonic hg38 SKCM TCGA-ER-A197-06A 3 7 5'UTR-5'UTR Inter-chr p16.3 Transcription factor p13 Seq+ 103307 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1B-SAMD5 ARID1B chr6 156829421 + SAMD5 chr6 147564394 + Exonic hg38 SKCM TCGA-ER-A197-06A 3 5 In-Frame Intra-chr q25.3 Oncogene q24.3 Seq+ 103308 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID4B-SCCPDH ARID4B chr1 235194013 - SCCPDH chr1 246764246 + Exonic hg38 SKCM TCGA-ER-A197-06A 3 5 Out-of-frame Intra-chr q42.3 q44 Seq+ 103309 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACSF2-ABCA9 ACSF2 chr17 50426389 + ABCA9 chr17 69024353 - Exonic hg38 SKCM TCGA-ER-A197-06A 3 4 In-Frame Intra-chr q21.33 q24.2 Seq+ 103310 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEMT-SCUBE1 PEMT chr17 17576920 - SCUBE1 chr22 43258335 - Exonic hg38 SKCM TCGA-ER-A197-06A 2 7 Out-of-frame Inter-chr p11.2 q13.2 Seq+ 103311 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD2-ZNF880 CHD2 chr15 92901299 + ZNF880 chr19 52383849 + Exonic hg38 SKCM TCGA-ER-A197-06A 3 2 Out-of-frame Inter-chr q26.1 q13.41 Transcription factor Seq+ 103312 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGAT2-TMEM126A DGAT2 chr11 75769112 + TMEM126A chr11 85654063 + Exonic hg38 SKCM TCGA-ER-A197-06A 2 5 Out-of-frame Intra-chr q13.5 q14.1 Seq+ 103313 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFX3-ARID4B RFX3 chr9 3525747 - ARID4B chr1 235196115 - Exonic hg38 SKCM TCGA-ER-A197-06A 2 5 5'UTR-CDS Inter-chr p24.2 Transcription factor q42.3 Seq+ 103314 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHST12-PLA2G4E CHST12 chr7 2403645 + PLA2G4E chr15 41984619 - Exonic hg38 SKCM TCGA-ER-A197-06A 2 4 5'UTR-CDS Inter-chr p22.3 q15.1 Seq+ 103315 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCMT1-CCT2 PCMT1 chr6 149773169 + CCT2 chr12 69587505 + Exonic hg38 SKCM TCGA-ER-A197-06A 1 8 In-Frame Inter-chr q25.1 q15 103316 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D22A-SMYD3 TBC1D22A chr22 46762848 + SMYD3 chr1 246335474 - Exonic hg38 SKCM TCGA-ER-A197-06A 1 6 Out-of-frame Inter-chr q13.31 q44 Transcription factor Seq+ 103317 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTGDS-NOC4L PTGDS chr9 136977692 + NOC4L chr12 132150981 + Exonic hg38 SKCM TCGA-ER-A197-06A 2 1 Out-of-frame Inter-chr q34.3 q24.33 Seq+ 103318 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1B-SASH1 ARID1B chr6 156829421 + SASH1 chr6 148390134 + Exonic hg38 SKCM TCGA-ER-A197-06A 1 4 In-Frame Intra-chr q25.3 Oncogene q24.3 Tumor suppressor gene Seq+ 103319 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP135-TRIM58 CEP135 chr4 55981379 + TRIM58 chr1 247860617 + Exonic hg38 SKCM TCGA-ER-A197-06A 1 3 In-Frame Inter-chr q12 q44 103320 ChimerSeq TCGA FAWG TCGA_RNA-Seq B2M-PPP4R1 B2M chr15 44711613 + PPP4R1 chr18 9562075 - Exonic hg38 SKCM TCGA-ER-A198-06A 27 467 3'UTR-3'UTR Inter-chr Oncogene p11.22 Seq+ 103321 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCUN1D4-USP46 DCUN1D4 chr4 51886638 + USP46 chr4 52610617 - Exonic hg38 SKCM TCGA-ER-A19B-06A 5 34 In-Frame Intra-chr q12 q12 Seq+ 103322 ChimerSeq TCGA FAWG TCGA_RNA-Seq C15orf41-RAC2 C15orf41 chr15 36709961 + RAC2 chr22 37232918 - Exonic hg38 SKCM TCGA-ER-A19C-06A 26 113 In-Frame Inter-chr q14 q13.1 Seq+ 103323 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAB1-PHF21B TAB1 chr22 39417849 + PHF21B chr22 44885938 - Exonic hg38 SKCM TCGA-ER-A19C-06A 8 33 Out-of-frame Intra-chr q13.1 q13.31 Seq+ 103324 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS17-NCF4 ADAMTS17 chr15 99993048 - NCF4 chr22 36864045 + Exonic hg38 SKCM TCGA-ER-A19C-06A 2 28 CDS-3'UTR Inter-chr q26.3 Seq+ 103325 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPATCH11-DYM GPATCH11 chr2 37088440 + DYM chr18 49163787 - Exonic hg38 SKCM TCGA-ER-A19E-06A 13 96 In-Frame Inter-chr p22.2 q21.1 Seq+ 103326 ChimerSeq TCGA FAWG TCGA_RNA-Seq XRCC2-WASL XRCC2 chr7 152676041 - WASL chr7 123692378 - Exonic hg38 SKCM TCGA-ER-A19E-06A 8 76 Out-of-frame Intra-chr q36.1 Oncogene q31.32 Seq+ 103327 ChimerSeq TCGA FAWG TCGA_RNA-Seq MVB12B-MAMDC2 MVB12B chr9 126421948 + MAMDC2 chr9 70218337 + Exonic hg38 SKCM TCGA-ER-A19E-06A 10 37 CDS-3'UTR Intra-chr q33.3 q21.12 Seq+ 103328 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM1L-BICD1 DNM1L chr12 32679465 + BICD1 chr12 32334516 + Exonic hg38 SKCM TCGA-ER-A19E-06A 9 18 In-Frame Intra-chr p11.21 p11.21 Seq+ 103329 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF38-LCE5A RNF38 chr9 36424613 - LCE5A chr1 152511514 + Exonic hg38 SKCM TCGA-ER-A19E-06A 4 27 5'UTR-5'UTR Inter-chr p13.2 q21.3 103330 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMC2-AKNA SMC2 chr9 104111814 + AKNA chr9 114364619 - Exonic hg38 SKCM TCGA-ER-A19E-06A 2 4 In-Frame Intra-chr q31.1 q32 Transcription factor Seq+ 103331 ChimerSeq TCGA FAWG TCGA_RNA-Seq CORO2A-C9orf3 CORO2A chr9 98157460 - C9orf3 chr9 95005158 + Exonic hg38 SKCM TCGA-ER-A19E-06A 1 7 Out-of-frame Intra-chr q22.33 q22.32 Seq+ 103332 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARV1-CAPN9 ARV1 chr1 230990263 + CAPN9 chr1 230778973 + Exonic hg38 SKCM TCGA-ER-A19E-06A 1 5 Out-of-frame Intra-chr q42.2 q42.2 Seq+ 103333 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM19A4-UBA3 FAM19A4 chr3 68880730 - UBA3 chr3 69056283 - Exonic hg38 SKCM TCGA-ER-A19E-06A 1 5 Out-of-frame Intra-chr p14.1 p14.1 Seq+ 103334 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC4-PTPRN2 EXOC4 chr7 134007835 + PTPRN2 chr7 158489785 - Exonic hg38 SKCM TCGA-ER-A19E-06A 1 3 Out-of-frame Intra-chr q33 q36.3 Seq+ 103335 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM9SF2-HSP90B1 TM9SF2 chr13 99520129 + HSP90B1 chr12 103938340 + Exonic hg38 SKCM TCGA-ER-A19E-06A 1 1 In-Frame Inter-chr q32.3 q23.3 Tumor suppressor gene 103336 ChimerSeq TCGA FAWG TCGA_RNA-Seq XRN1-RUVBL1 XRN1 chr3 142380082 - RUVBL1 chr3 128119414 - Exonic hg38 SKCM TCGA-ER-A19F-06A 25 54 In-Frame Intra-chr q23 q21.3 Seq+ 103337 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPL-LAMC1 NPL chr1 182816806 + LAMC1 chr1 183110488 + Exonic hg38 SKCM TCGA-ER-A19F-06A 1 7 Out-of-frame Intra-chr q25.3 q25.3 103338 ChimerSeq TCGA FAWG TCGA_RNA-Seq MINOS1-PQLC2 MINOS1 chr1 19597109 + PQLC2 chr1 19324633 + Exonic hg38 SKCM TCGA-ER-A19G-06A 46 152 Out-of-frame Intra-chr p36.13 p36.13 Seq+ 103339 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPSF6-NUP107 CPSF6 chr12 69262562 + NUP107 chr12 68732637 + Exonic hg38 SKCM TCGA-ER-A19G-06A 2 20 3'UTR-CDS Intra-chr q15 q15 Seq+ 103340 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCLK2-UST DCLK2 chr4 150079448 + UST chr6 149073833 + Exonic hg38 SKCM TCGA-ER-A19H-06A 7 16 In-Frame Inter-chr q31.23 CAMK:DCAMKL q25.1 Seq+ 103341 ChimerSeq TCGA FAWG TCGA_RNA-Seq NELL1-SMCO4 NELL1 chr11 20885540 + SMCO4 chr11 93499348 - Exonic hg38 SKCM TCGA-ER-A19H-06A 4 24 CDS-5'UTR Intra-chr p15.1 q21 103342 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCSH-PGPEP1 PRKCSH chr19 11445473 + PGPEP1 chr19 18355895 + Exonic hg38 SKCM TCGA-ER-A19H-06A 2 15 Out-of-frame Intra-chr p13.2 p13.11 Seq+ 103343 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK32B-GINS1 STK32B chr4 5139960 + GINS1 chr20 25417104 + Exonic hg38 SKCM TCGA-ER-A19H-06A 1 4 Out-of-frame Inter-chr p16.2 p11.21 103344 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK2-LMAN2 DOCK2 chr5 169840852 + LMAN2 chr5 177334403 - Exonic hg38 SKCM TCGA-ER-A19J-06A 1 5 Out-of-frame Intra-chr q35.1 q35.3 103345 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMAN2-DOCK2 LMAN2 chr5 177351173 - DOCK2 chr5 169747396 + Exonic hg38 SKCM TCGA-ER-A19J-06A 1 5 Out-of-frame Intra-chr q35.3 q35.1 Seq+ 103346 ChimerSeq TCGA FAWG TCGA_RNA-Seq NBR1-PALB2 NBR1 chr17 43197106 + PALB2 chr16 23614091 - Exonic hg38 SKCM TCGA-ER-A19K-01A 1 12 Out-of-frame Inter-chr q21.31 p12.2 Oncogene Tumor suppressor gene 103347 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLCN6-RAF1 CLCN6 chr1 11807190 + RAF1 chr3 12600415 - Exonic hg38 SKCM TCGA-ER-A19L-06A 30 98 In-Frame Inter-chr p36.22 p25.2 TKL:RAF Oncogene Seq+ 103348 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX5-PCSK2 SNX5 chr20 17952587 - PCSK2 chr20 17358327 + Exonic hg38 SKCM TCGA-ER-A19L-06A 21 102 In-Frame Intra-chr p11.23 p12.1 Seq+ 103349 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYSLTR2-DLEU1 CYSLTR2 chr13 48696626 + DLEU1 chr13 50104704 + Exonic hg38 SKCM TCGA-ER-A19L-06A 2 20 5'UTR-5'UTR Intra-chr q14.2 q14.2 Tumor suppressor gene 103350 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF79-SLC2A8 ZNF79 chr9 127436003 + SLC2A8 chr9 127399907 + Exonic hg38 SKCM TCGA-ER-A19L-06A 4 7 Out-of-frame Intra-chr q33.3 Transcription factor q33.3 Seq+ 103351 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF667-ZNF837 ZNF667 chr19 56462338 - ZNF837 chr19 58369928 - Exonic hg38 SKCM TCGA-ER-A19M-06A 17 79 5'UTR-5'UTR Intra-chr q13.43 Transcription factor q13.43 Transcription factor Seq+ 103352 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBCB-SCGB1B2P TBCB chr19 36115674 + SCGB1B2P chr19 34577456 - Exonic hg38 SKCM TCGA-ER-A19M-06A 1 20 3'UTR-3'UTR Intra-chr q13.12 q13.11 103353 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC27A1-RASGRP4 SLC27A1 chr19 17470707 + RASGRP4 chr19 38420262 - Exonic hg38 SKCM TCGA-ER-A19M-06A 2 14 In-Frame Intra-chr p13.11 q13.2 Seq+ 103354 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFMBT1-PTPRG SFMBT1 chr3 53046460 - PTPRG chr3 61989625 + Exonic hg38 SKCM TCGA-ER-A19M-06A 1 10 5'UTR-CDS Intra-chr p21.1 p14.2 Seq+ 103355 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS15L1-ZNF568 EPS15L1 chr19 16413773 - ZNF568 chr19 36922586 + Exonic hg38 SKCM TCGA-ER-A19M-06A 2 4 CDS-5'UTR Intra-chr p13.11 q13.12 Transcription factor Seq+ 103356 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAG9-RDX SPAG9 chr17 51079584 - RDX chr11 110232033 - Exonic hg38 SKCM TCGA-ER-A19N-06A 59 125 Out-of-frame Inter-chr q21.33 q22.3 Seq+ 103357 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGHG1-HSP90AB1 IGHG1 chr14 105741635 - HSP90AB1 chr6 44253211 + Exonic hg38 SKCM TCGA-ER-A19N-06A 3 7 Out-of-frame Inter-chr q32.33 p21.1 Oncogene Seq+ 103358 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIAS2-SKOR2 PIAS2 chr18 46917322 - SKOR2 chr18 47212151 - Exonic hg38 SKCM TCGA-ER-A19O-06A 2 8 In-Frame Intra-chr q21.1 q21.1 Transcription factor 103359 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD9-RBL2 CHD9 chr16 53297158 + RBL2 chr16 53439016 + Exonic hg38 SKCM TCGA-ER-A19S-06A 1 4 Out-of-frame Intra-chr q12.2 q12.2 Tumor suppressor gene 103360 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPPL2A-TENM4 SPPL2A chr15 50719940 - TENM4 chr11 79070009 - Exonic hg38 SKCM TCGA-ER-A19T-01A 35 269 CDS-5'UTR Inter-chr q21.2 q14.1 Seq+ 103361 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAB2-FGF7 GAB2 chr11 78250157 - FGF7 chr15 49424032 + Exonic hg38 SKCM TCGA-ER-A19T-01A 26 263 CDS-5'UTR Inter-chr q14.1 q21.2 Seq+ 103362 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM168A-PXDNL FAM168A chr11 73597923 - PXDNL chr8 51426758 - Exonic hg38 SKCM TCGA-ER-A19T-01A 15 118 5'UTR-CDS Inter-chr q13.4 q11.23 Seq+ 103363 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM168A-RNF121 FAM168A chr11 73597923 - RNF121 chr11 71957227 + Exonic hg38 SKCM TCGA-ER-A19T-01A 20 49 5'UTR-CDS Intra-chr q13.4 q13.4 Seq+ 103364 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-TPCN2 PVT1 chr8 127794734 + TPCN2 chr11 69062884 + Exonic hg38 SKCM TCGA-ER-A19T-01A 8 60 5'UTR-CDS Inter-chr q24.21 q13.3 Seq+ 103365 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF121-PXDNL RNF121 chr11 71957264 + PXDNL chr8 51426758 - Exonic hg38 SKCM TCGA-ER-A19T-01A 14 24 Out-of-frame Inter-chr q13.4 q11.23 Seq+ 103366 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBAC1-SHANK2 UBAC1 chr9 135961025 - SHANK2 chr11 71224796 - Exonic hg38 SKCM TCGA-ER-A19T-01A 9 41 CDS-5'UTR Inter-chr q34.3 q13.4 Seq+ 103367 ChimerSeq TCGA FAWG TCGA_RNA-Seq PXDNL-USP8 PXDNL chr8 51339624 - USP8 chr15 50477276 + Exonic hg38 SKCM TCGA-ER-A19T-01A 5 53 Out-of-frame Inter-chr q11.23 q21.2 Seq+ 103368 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHC2-RNF126 SHC2 chr19 460529 - RNF126 chr19 652884 - Exonic hg38 SKCM TCGA-ER-A19T-01A 9 34 In-Frame Intra-chr p13.3 p13.3 Seq+ 103369 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD55-PLD5 CD55 chr1 207339417 + PLD5 chr1 242220115 - Exonic hg38 SKCM TCGA-ER-A19T-01A 10 26 In-Frame Intra-chr q32.2 q43 Seq+ 103370 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCHSD2-ATP6V1H FCHSD2 chr11 73140031 - ATP6V1H chr8 53769743 - Exonic hg38 SKCM TCGA-ER-A19T-01A 2 44 In-Frame Inter-chr q13.4 q11.23 Seq+ 103371 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB6A-RP1 RAB6A chr11 73760566 - RP1 chr8 54857028 + Exonic hg38 SKCM TCGA-ER-A19T-01A 4 29 CDS-3'UTR Inter-chr q13.4 q11.23 103372 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF704-IMPA1 ZNF704 chr8 80687226 - IMPA1 chr8 81671047 - Exonic hg38 SKCM TCGA-ER-A19T-01A 3 30 Out-of-frame Intra-chr q21.13 Transcription factor q21.13 Seq+ 103373 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNA2D2-THRSP CACNA2D2 chr3 50503218 - THRSP chr11 78067659 + Exonic hg38 SKCM TCGA-ER-A19T-01A 4 12 CDS-3'UTR Inter-chr p21.31 q14.1 Seq+ 103374 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCYL2-ANKS1B SCYL2 chr12 100267792 + ANKS1B chr12 99825389 - Exonic hg38 SKCM TCGA-ER-A19T-01A 2 12 5'UTR-CDS Intra-chr q23.1 Other:SCY1 q23.1 Seq+ 103375 ChimerSeq TCGA FAWG TCGA_RNA-Seq NLGN4Y-TXLNGY NLGN4Y chrY 14524708 + TXLNGY chrY 19587210 + Exonic hg38 SKCM TCGA-ER-A19T-01A 2 7 5'UTR-5'UTR Intra-chr q11.221 q11.222 103376 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBL-RASGRP4 FBL chr19 39846291 - RASGRP4 chr19 38410096 - Exonic hg38 SKCM TCGA-ER-A19T-01A 2 6 5'UTR-CDS Intra-chr q13.2 Seq+ 103377 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC9A1-WASF2 SLC9A1 chr1 27153983 - WASF2 chr1 27428933 - Exonic hg38 SKCM TCGA-ER-A19T-01A 1 7 CDS-5'UTR Intra-chr p36.11 p36.11 103378 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAD3-LRP5 SMAD3 chr15 67066360 + LRP5 chr11 68347847 + Exonic hg38 SKCM TCGA-ER-A19T-01A 2 3 Out-of-frame Inter-chr q22.33 Transcription factor q13.2 103379 ChimerSeq TCGA FAWG TCGA_RNA-Seq C12orf76-IFT81 C12orf76 chr12 110073422 - IFT81 chr12 110180422 + Exonic hg38 SKCM TCGA-ER-A19W-06A 80 415 3'UTR-CDS Intra-chr q24.11 q24.11 Seq+ 103380 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO5A-TRPM1 MYO5A chr15 52405287 - TRPM1 chr15 31042243 - Exonic hg38 SKCM TCGA-ER-A19W-06A 31 195 CDS-5'UTR Intra-chr q21.2 q13.3 Seq+ 103381 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCHSD2-TPCN2 FCHSD2 chr11 72902543 - TPCN2 chr11 69057578 + Exonic hg38 SKCM TCGA-ER-A19W-06A 13 80 In-Frame Intra-chr q13.4 q13.3 Seq+ 103382 ChimerSeq TCGA FAWG TCGA_RNA-Seq WASF2-FGR WASF2 chr1 27489986 - FGR chr1 27625151 - Exonic hg38 SKCM TCGA-ER-A19W-06A 4 61 5'UTR-5'UTR Intra-chr p36.11 p35.3 TK:Src Seq+ 103383 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPT1A-KMT5B CPT1A chr11 68841775 - KMT5B chr11 68175183 - Exonic hg38 SKCM TCGA-ER-A19W-06A 7 14 5'UTR-5'UTR Intra-chr q13.3 q13.2 103384 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM118B-DCPS FAM118B chr11 126211830 + DCPS chr11 126331405 + Exonic hg38 SKCM TCGA-ER-A19W-06A 7 9 5'UTR-CDS Intra-chr q24.2 q24.2 Seq+ 103385 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCK5-HSF1 ADCK5 chr8 144383230 + HSF1 chr8 144313511 + Exonic hg38 SKCM TCGA-ER-A19W-06A 5 16 3'UTR-3'UTR Intra-chr q24.3 Atypical:ABC1 q24.3 Transcription factor Seq+ 103386 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBNL1-SERP1 MBNL1 chr3 152432920 + SERP1 chr3 150567106 - Exonic hg38 SKCM TCGA-ER-A19W-06A 4 18 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 103387 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLMN-SOS2 CLMN chr14 95319711 - SOS2 chr14 50120384 - Exonic hg38 SKCM TCGA-ER-A19W-06A 4 10 In-Frame Intra-chr q32.13 q21.3 Seq+ 103388 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC38A10-NPLOC4 SLC38A10 chr17 81289691 - NPLOC4 chr17 81622278 - Exonic hg38 SKCM TCGA-ER-A19W-06A 3 8 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 103389 ChimerSeq TCGA FAWG TCGA_RNA-Seq BANP-JPH3 BANP chr16 88018667 + JPH3 chr16 87644258 + Exonic hg38 SKCM TCGA-ER-A1A1-06A 15 17 In-Frame Intra-chr q24.2 Tumor suppressor gene q24.2 Seq+ 103390 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMSS1-LNP1 CMSS1 chr3 99818043 + LNP1 chr3 100429697 + Exonic hg38 SKCM TCGA-ER-A1A1-06A 2 9 CDS-5'UTR Intra-chr q12.1 q12.2 Seq+ 103391 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF791-KMT2E ZNF791 chr19 12611082 + KMT2E chr7 105073619 + Exonic hg38 SKCM TCGA-ER-A1A1-06A 1 4 Out-of-frame Inter-chr p13.13 Transcription factor q22.3 103392 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAM19-FNDC9 ADAM19 chr5 157492973 - FNDC9 chr5 157343543 - Exonic hg38 SKCM TCGA-ER-A2NC-06A 5 11 CDS-5'UTR Intra-chr q33.3 q33.3 103393 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP33-WASHC3 USP33 chr1 77711747 - WASHC3 chr12 102013192 - Exonic hg38 SKCM TCGA-ER-A2ND-06A 19 204 Out-of-frame Inter-chr p31.1 Tumor suppressor gene q23.2 103394 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFE2L2-USP33 NFE2L2 chr2 177334393 - USP33 chr1 77701471 - Exonic hg38 SKCM TCGA-ER-A2ND-06A 7 15 5'UTR-CDS Inter-chr q31.2 Oncogene Transcription factor p31.1 Tumor suppressor gene Seq+ 103395 ChimerSeq TCGA FAWG TCGA_RNA-Seq AVIL-TRHDE AVIL chr12 57808194 - TRHDE chr12 72286681 + Exonic hg38 SKCM TCGA-ER-A2NE-06A 23 55 Out-of-frame Intra-chr q14.1 q21.1 Seq+ 103396 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED31-FBXW10 MED31 chr17 6650356 - FBXW10 chr17 18747941 + Exonic hg38 SKCM TCGA-ER-A2NE-06A 7 23 In-Frame Intra-chr p13.1 p11.2 Seq+ 103397 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXNDC17-YBX2 TXNDC17 chr17 6641227 + YBX2 chr17 7290535 - Exonic hg38 SKCM TCGA-ER-A2NE-06A 4 32 Out-of-frame Intra-chr p13.1 p13.1 Transcription factor Seq+ 103398 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOXB6-EPHA5 HOXB6 chr17 48604480 - EPHA5 chr4 65643427 - Exonic hg38 SKCM TCGA-ER-A2NE-06A 2 12 5'UTR-5'UTR Inter-chr q21.32 Transcription factor q13.2 Oncogene Seq+ 103399 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOXB3-EPHA5 HOXB3 chr17 48604480 - EPHA5 chr4 65643427 - Exonic hg38 SKCM TCGA-ER-A2NE-06A 2 7 5'UTR-5'UTR Inter-chr q21.32 Transcription factor q13.2 Oncogene 103400 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERICH1-PTPRR ERICH1 chr8 692478 - PTPRR chr12 70892977 - Exonic hg38 SKCM TCGA-ER-A2NE-06A 1 8 In-Frame Inter-chr q15 Seq+ 103401 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBR4-GALNTL6 CBR4 chr4 169002071 - GALNTL6 chr4 172809361 + Exonic hg38 SKCM TCGA-ER-A2NF-01A 2 3 In-Frame Intra-chr q32.3 q34.1 Seq+ 103402 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL12RB2-SDC3 IL12RB2 chr1 67351089 + SDC3 chr1 30877165 - Exonic hg38 SKCM TCGA-ER-A2NG-06A 4 19 In-Frame Intra-chr p31.3 p35.2 Seq+ 103403 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNAB2-ACOT7 KCNAB2 chr1 6040645 + ACOT7 chr1 6349866 - Exonic hg38 SKCM TCGA-ER-A2NG-06A 3 8 In-Frame Intra-chr p36.31 p36.31 Seq+ 103404 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKL3-SIL1 CDKL3 chr5 134370998 - SIL1 chr5 139127853 - Exonic hg38 SKCM TCGA-ER-A2NH-06A 12 4 5'UTR-5'UTR Intra-chr q31.1 CMGC:CDKL q31.2 Seq+ 103405 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLF7-PARD3B KLF7 chr2 207123774 - PARD3B chr2 205047581 + Exonic hg38 SKCM TCGA-ER-A2NH-06A 2 5 In-Frame Intra-chr q33.3 Transcription factor q33.3 Seq+ 103406 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAP1-PBRM1 BAP1 chr3 52404453 - PBRM1 chr3 52629035 - Exonic hg38 SKCM TCGA-ER-A3ES-06A 1 6 In-Frame Intra-chr p21.1 Oncogene Tumor suppressor gene p21.1 Oncogene Tumor suppressor gene Seq+ 103407 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRR12-FDX2 PRR12 chr19 49601918 + FDX2 chr19 10310940 - Exonic hg38 SKCM TCGA-ER-A3ET-06A 16 91 Out-of-frame Intra-chr q13.33 Transcription factor p13.2 103408 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGLN2-SIGLEC20P EGLN2 chr19 40801415 + SIGLEC20P chr19 51190623 + Exonic hg38 SKCM TCGA-ER-A3ET-06A 7 105 Out-of-frame Intra-chr q13.2 q13.41 Seq+ 103409 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALY-PAK5 RALY chr20 34031604 + PAK5 chr20 9557734 - Exonic hg38 SKCM TCGA-ER-A3ET-06A 21 46 5'UTR-CDS Intra-chr q11.22 p12.2 STE:STE20 103410 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAMP2-PLAUR SCAMP2 chr15 74873199 - PLAUR chr19 43656640 - Exonic hg38 SKCM TCGA-ER-A3ET-06A 1 28 Out-of-frame Inter-chr q24.1 q13.31 Seq+ 103411 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEGR1-CYP2J2 NEGR1 chr1 72282319 - CYP2J2 chr1 59916100 - Exonic hg38 SKCM TCGA-ER-A3ET-06A 4 11 Out-of-frame Intra-chr p31.1 p32.1 Seq+ 103412 ChimerSeq TCGA FAWG TCGA_RNA-Seq OTUB1-DLG2 OTUB1 chr11 63986514 + DLG2 chr11 84534731 - Exonic hg38 SKCM TCGA-ER-A3ET-06A 4 5 Out-of-frame Intra-chr q13.1 q14.1 Seq+ 103413 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF134-RYR1 ZNF134 chr19 57614503 + RYR1 chr19 38543347 + Exonic hg38 SKCM TCGA-ER-A3ET-06A 3 8 5'UTR-CDS Intra-chr q13.43 Transcription factor q13.2 Seq+ 103414 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1orf87-FGGY C1orf87 chr1 59997609 - FGGY chr1 59757931 + Exonic hg38 SKCM TCGA-ER-A3ET-06A 1 10 In-Frame Intra-chr p32.1 p32.1 Seq+ 103415 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS7-TMEM135 ADAMTS7 chr15 78811121 - TMEM135 chr11 87236638 + Exonic hg38 SKCM TCGA-ER-A3ET-06A 2 5 Out-of-frame Inter-chr q25.1 q14.2 Seq+ 103416 ChimerSeq TCGA FAWG TCGA_RNA-Seq XXYLT1-CEACAM7 XXYLT1 chr3 195156449 - CEACAM7 chr19 41684063 - Exonic hg38 SKCM TCGA-ER-A3ET-06A 1 5 CDS-3'UTR Inter-chr q29 103417 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFAND2A-PHF14 ZFAND2A chr7 1159964 - PHF14 chr7 11169416 + Exonic hg38 SKCM TCGA-ER-A3EV-06A 11 45 5'UTR-5'UTR Intra-chr p22.3 p21.3 Seq+ 103418 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUBN-ALDH16A1 CUBN chr10 16982484 - ALDH16A1 chr19 49458486 + Exonic hg38 SKCM TCGA-ER-A3EV-06A 14 25 3'UTR-CDS Inter-chr p13 q13.33 Seq+ 103419 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF8-ETV3 DCAF8 chr1 160237135 - ETV3 chr1 157136365 - Exonic hg38 SKCM TCGA-ER-A3EV-06A 9 20 CDS-5'UTR Intra-chr q23.2 q23.1 Transcription factor Seq+ 103420 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMIZ1-BTD ZMIZ1 chr10 79162133 + BTD chr3 15635424 + Exonic hg38 SKCM TCGA-ER-A3EV-06A 4 38 5'UTR-5'UTR Inter-chr q22.3 p25.1 Seq+ 103421 ChimerSeq TCGA FAWG TCGA_RNA-Seq JARID2-NEDD9 JARID2 chr6 15246584 + NEDD9 chr6 11306155 - Exonic hg38 SKCM TCGA-ER-A3EV-06A 4 6 CDS-5'UTR Intra-chr p22.3 p24.2 Seq+ 103422 ChimerSeq TCGA FAWG TCGA_RNA-Seq C10orf90-ADAM12 C10orf90 chr10 126646565 - ADAM12 chr10 126049669 - Exonic hg38 SKCM TCGA-ER-A3EV-06A 3 8 In-Frame Intra-chr q26.2 q26.2 103423 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPF3-TARS2 PRPF3 chr1 150335241 + TARS2 chr1 150496482 + Exonic hg38 SKCM TCGA-ER-A3EV-06A 1 13 In-Frame Intra-chr q21.2 q21.2 103424 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF144B-KDM1B RNF144B chr6 18427685 + KDM1B chr6 18197057 + Exonic hg38 SKCM TCGA-ER-A3EV-06A 3 4 In-Frame Intra-chr p22.3 p22.3 Seq+ 103425 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL5-MERTK METTL5 chr2 169819561 - MERTK chr2 112028351 + Exonic hg38 SKCM TCGA-ER-A3EV-06A 2 5 Out-of-frame Intra-chr q31.1 q13 Seq+ 103426 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROBO1-HMCN1 ROBO1 chr3 78938601 - HMCN1 chr1 185997429 + Exonic hg38 SKCM TCGA-ER-A3EV-06A 1 9 In-Frame Inter-chr p12.3 Tumor suppressor gene q25.3 Seq+ 103427 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED25-ST8SIA6 MED25 chr19 49819296 + ST8SIA6 chr10 17390620 - Exonic hg38 SKCM TCGA-ER-A3EV-06A 2 4 In-Frame Inter-chr q13.33 p12.33 Seq+ 103428 ChimerSeq TCGA FAWG TCGA_RNA-Seq CABIN1-LRRC41 CABIN1 chr22 24043084 + LRRC41 chr1 46261404 - Exonic hg38 SKCM TCGA-ER-A3EV-06A 1 6 CDS-3'UTR Inter-chr p33 103429 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV3-SEC22B ETV3 chr1 157135471 - SEC22B chr1 120163370 - Exonic hg38 SKCM TCGA-ER-A3EV-06A 2 1 In-Frame Intra-chr q23.1 Transcription factor p12 Seq+ 103430 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC2-MDGA1 EXOC2 chr6 693019 - MDGA1 chr6 37644649 - Exonic hg38 SKCM TCGA-ER-A3EV-06A 1 5 5'UTR-CDS Intra-chr p25.3 p21.2 Seq+ 103431 ChimerSeq TCGA FAWG TCGA_RNA-Seq JARID2-MRS2 JARID2 chr6 15246584 + MRS2 chr6 24405168 + Exonic hg38 SKCM TCGA-ER-A3EV-06A 1 4 Out-of-frame Intra-chr p22.3 p22.3 103432 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARAP1-DYNC2H1 ARAP1 chr11 72721850 - DYNC2H1 chr11 103191517 + Exonic hg38 SKCM TCGA-ER-A3EV-06A 1 2 5'UTR-CDS Intra-chr q13.4 q22.3 Seq+ 103433 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAG1-FAM13C PAG1 chr8 81070112 - FAM13C chr10 59247737 - Exonic hg38 SKCM TCGA-ER-A3EV-06A 1 2 5'UTR-CDS Inter-chr q21.13 q21.1 103434 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDYL-TBC1D22B CDYL chr6 4776807 + TBC1D22B chr6 37282185 + Exonic hg38 SKCM TCGA-ER-A3EV-06A 1 1 Out-of-frame Intra-chr p25.1 p21.2 103435 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM86C1-STX8 FAM86C1 chr11 71796166 + STX8 chr17 9378653 - Exonic hg38 SKCM TCGA-ER-A3PL-06A 1 4 Out-of-frame Inter-chr q13.4 p13.1 103436 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR1OP-AFDN FGFR1OP chr6 166999514 + AFDN chr6 167902317 + Exonic hg38 SKCM TCGA-ER-A3PL-06A 1 2 Out-of-frame Intra-chr q27 q27 103437 ChimerSeq TCGA FAWG TCGA_RNA-Seq DUXAP9-PARL DUXAP9 chr14 19066347 + PARL chr3 183868060 - Exonic hg38 SKCM TCGA-ER-A42H-01A 1 31 3'UTR-3'UTR Inter-chr q11.2 q27.1 103438 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMTM7-CLDN11 CMTM7 chr3 32392065 + CLDN11 chr3 170708044 + Exonic hg38 SKCM TCGA-ER-A42H-01A 2 13 CDS-3'UTR Intra-chr p22.3 q26.2 Seq+ 103439 ChimerSeq TCGA FAWG TCGA_RNA-Seq THAP1-SFRP1 THAP1 chr8 42843024 - SFRP1 chr8 41303538 - Exonic hg38 SKCM TCGA-ER-A42H-01A 2 3 Out-of-frame Intra-chr p11.21 Transcription factor p11.21 Tumor suppressor gene Seq+ 103440 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREBBP-C16orf59 CREBBP chr16 3738559 - C16orf59 chr16 2464039 + Exonic hg38 SKCM TCGA-ER-A42K-06A 2 8 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 103441 ChimerSeq TCGA FAWG TCGA_RNA-Seq APP-CCT8 APP chr21 26170564 - CCT8 chr21 29070337 - Exonic hg38 SKCM TCGA-ER-A42L-06A 15 39 In-Frame Intra-chr q21.3 q21.3 Seq+ 103442 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTNB-ADCY3 DTNB chr2 25673386 - ADCY3 chr2 24834936 - Exonic hg38 SKCM TCGA-ER-A42L-06A 3 17 5'UTR-CDS Intra-chr p23.3 p23.3 Seq+ 103443 ChimerSeq TCGA FAWG TCGA_RNA-Seq N4BP2L2-ZMYM5 N4BP2L2 chr13 32538618 - ZMYM5 chr13 19838985 - Exonic hg38 SKCM TCGA-ER-A42L-06A 1 3 5'UTR-CDS Intra-chr q13.1 q12.11 Seq+ 103444 ChimerSeq TCGA FAWG TCGA_RNA-Seq AZIN1-RNF19A AZIN1 chr8 102858013 - RNF19A chr8 100313372 - Exonic hg38 SKCM TCGA-FR-A2OS-01A 10 48 5'UTR-5'UTR Intra-chr q22.3 q22.2 Seq+ 103445 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTCF-CES2 CTCF chr16 67571264 + CES2 chr16 66938037 + Exonic hg38 SKCM TCGA-FR-A2OS-01A 5 68 5'UTR-5'UTR Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 Seq+ 103446 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNHG22-ZC3H3 SNHG22 chr18 49814062 + ZC3H3 chr8 143438087 - Exonic hg38 SKCM TCGA-FR-A2OS-01A 8 2 5'UTR-5'UTR Inter-chr q21.1 103447 ChimerSeq TCGA FAWG TCGA_RNA-Seq TET1-DDX50 TET1 chr10 68652594 + DDX50 chr10 68911068 + Exonic hg38 SKCM TCGA-FR-A2OS-01A 5 12 Out-of-frame Intra-chr q21.3 Oncogene Transcription factor q22.1 Seq+ 103448 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAALC-UBR5 BAALC chr8 103141057 + UBR5 chr8 102272772 - Exonic hg38 SKCM TCGA-FR-A2OS-01A 6 4 Out-of-frame Intra-chr q22.3 q22.3 Oncogene Seq+ 103449 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIRREL-CD48 KIRREL chr1 157993728 + CD48 chr1 160685189 - Exonic hg38 SKCM TCGA-FR-A3YN-06A 1 9 Out-of-frame Intra-chr q23.1 q23.3 Seq+ 103450 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF27-UBQLN1 KIF27 chr9 83870519 - UBQLN1 chr9 83678599 - Exonic hg38 SKCM TCGA-FR-A3YN-06A 1 2 In-Frame Intra-chr q21.32 q21.32 Seq+ 103451 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD11-BRMS1 ANKRD11 chr16 89418284 - BRMS1 chr11 66342241 - Exonic hg38 SKCM TCGA-FR-A3YO-06A 58 235 5'UTR-5'UTR Inter-chr q24.3 q13.2 Tumor suppressor gene Seq+ 103452 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBASH3B-GRIK4 UBASH3B chr11 122656210 + GRIK4 chr11 120952855 + Exonic hg38 SKCM TCGA-FR-A3YO-06A 5 37 Out-of-frame Intra-chr q24.1 q23.3 Seq+ 103453 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIPA1-FRMD8 SIPA1 chr11 65642639 + FRMD8 chr11 65404864 + Exonic hg38 SKCM TCGA-FR-A3YO-06A 1 3 In-Frame Intra-chr q13.1 q13.1 Seq+ 103454 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM120B-ORAI1 TMEM120B chr12 121712964 + ORAI1 chr12 121641041 + Exonic hg38 SKCM TCGA-FR-A44A-06A 8 37 CDS-3'UTR Intra-chr q24.31 q24.31 Seq+ 103455 ChimerSeq TCGA FAWG TCGA_RNA-Seq IL17RC-TTLL3 IL17RC chr3 9928630 + TTLL3 chr3 9816074 + Exonic hg38 SKCM TCGA-FR-A44A-06A 2 6 5'UTR-5'UTR Intra-chr p25.3 p25.3 Seq+ 103456 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB22A-L3MBTL1 RAB22A chr20 58311122 + L3MBTL1 chr20 43513476 + Exonic hg38 SKCM TCGA-FR-A44A-06A 1 7 CDS-5'UTR Intra-chr q13.32 q13.12 Transcription factor 103457 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEDD4L-IMMP2L NEDD4L chr18 58333892 + IMMP2L chr7 110886695 - Exonic hg38 SKCM TCGA-FR-A726-01A 2 21 Out-of-frame Inter-chr q21.31 Tumor suppressor gene q31.1 Seq+ 103458 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC18-DGKB TNRC18 chr7 5394440 - DGKB chr7 14178151 - Exonic hg38 SKCM TCGA-FR-A729-06A 16 47 In-Frame Intra-chr p22.1 p21.2 Seq+ 103459 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX7-WNK1 SNX7 chr1 98701903 + WNK1 chr12 878212 + Exonic hg38 SKCM TCGA-FR-A729-06A 1 5 In-Frame Inter-chr p21.3 p13.33 103460 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS4-ALG8 INTS4 chr11 77938651 - ALG8 chr11 78106912 - Exonic hg38 SKCM TCGA-FR-A7U8-06A 1 20 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 103461 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF207-LRRC37B ZNF207 chr17 32369782 + LRRC37B chr17 32049102 + Exonic hg38 SKCM TCGA-FR-A7U8-06A 2 16 3'UTR-CDS Intra-chr q11.2 Transcription factor q11.2 Seq+ 103462 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDHD1-DLGAP5 WDHD1 chr14 55000503 - DLGAP5 chr14 55154806 - Exonic hg38 SKCM TCGA-FR-A7U8-06A 3 8 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 103463 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTSL1-WNT5B ADAMTSL1 chr9 18474295 + WNT5B chr12 1631298 + Exonic hg38 SKCM TCGA-FR-A7U9-06A 18 49 CDS-5'UTR Inter-chr p22.2 p13.33 Seq+ 103464 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13B-CDH17 VPS13B chr8 99038566 + CDH17 chr8 94177721 - Exonic hg38 SKCM TCGA-FR-A7U9-06A 7 11 In-Frame Intra-chr q22.2 q22.1 Tumor suppressor gene Seq+ 103465 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTCH2-NDUFS3 MTCH2 chr11 47622701 - NDUFS3 chr11 47582088 + Exonic hg38 SKCM TCGA-FR-A7U9-06A 3 3 5'UTR-3'UTR Intra-chr p11.2 p11.2 Seq+ 103466 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-SRD5A3 PPFIA1 chr11 70330319 + SRD5A3 chr4 55359346 + Exonic hg38 SKCM TCGA-FR-A7UA-06A 2 9 Out-of-frame Inter-chr q13.3 q12 Seq+ 103467 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC8D-PALMD LRRC8D chr1 89843782 + PALMD chr1 99662319 + Exonic hg38 SKCM TCGA-FR-A7UA-06A 2 3 5'UTR-CDS Intra-chr p22.2 p21.2 Seq+ 103468 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANSL1-AARS KANSL1 chr17 46066537 - AARS chr16 70261157 - Exonic hg38 SKCM TCGA-FR-A8YC-06A 6 29 5'UTR-CDS Inter-chr q22.1 Seq+ 103469 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICAL3-CRYBB2P1 MICAL3 chr22 17841822 - CRYBB2P1 chr22 25520682 + Exonic hg38 SKCM TCGA-FR-A8YD-06A 10 1 CDS-3'UTR Intra-chr q11.21 q11.23 103470 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC3-TRIP13 EXOC3 chr5 447752 + TRIP13 chr5 894787 + Exonic hg38 SKCM TCGA-FR-A8YE-06A 4 32 Out-of-frame Intra-chr p15.33 p15.33 Seq+ 103471 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUB1-GHR SUB1 chr5 32591685 + GHR chr5 42565864 + Exonic hg38 SKCM TCGA-FR-A8YE-06A 1 8 Out-of-frame Intra-chr p13.3 p13.1 Seq+ 103472 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATAD2B-S100A4 GATAD2B chr1 153922733 - S100A4 chr1 153544809 - Exonic hg38 SKCM TCGA-FS-A1YW-06A 3 116 5'UTR-5'UTR Intra-chr Transcription factor q21.3 Seq+ 103473 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATAD2B-S100A3 GATAD2B chr1 153922733 - S100A3 chr1 153548490 - Exonic hg38 SKCM TCGA-FS-A1YW-06A 5 32 5'UTR-5'UTR Intra-chr Transcription factor q21.3 Seq+ 103474 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL18-ELFN1 FBXL18 chr7 5491231 - ELFN1 chr7 1709091 + Exonic hg38 SKCM TCGA-FS-A1YW-06A 3 15 CDS-5'UTR Intra-chr p22.1 p22.3 103475 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGGT1B-CCDC112 PGGT1B chr5 115262712 - CCDC112 chr5 115275606 - Exonic hg38 SKCM TCGA-FS-A1YX-06A 1 5 In-Frame Intra-chr q22.3 q22.3 103476 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC35C2-ELMO2 SLC35C2 chr20 46354882 - ELMO2 chr20 46367560 - Exonic hg38 SKCM TCGA-FS-A1YX-06A 1 3 Out-of-frame Intra-chr q13.12 q13.12 103477 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF507-BCL2L13 ZNF507 chr19 32360618 + BCL2L13 chr22 17726677 + Exonic hg38 SKCM TCGA-FS-A1YY-06A 14 98 In-Frame Inter-chr q13.11 Transcription factor q11.21 Seq+ 103478 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNQ5-RNF217 KCNQ5 chr6 73003998 + RNF217 chr6 125076657 + Exonic hg38 SKCM TCGA-FS-A1Z0-06A 5 19 In-Frame Intra-chr q13 q22.31 Seq+ 103479 ChimerSeq TCGA FAWG TCGA_RNA-Seq PNLDC1-KLHL32 PNLDC1 chr6 159804637 + KLHL32 chr6 97041492 + Exonic hg38 SKCM TCGA-FS-A1Z0-06A 4 7 Out-of-frame Intra-chr q25.3 q16.1 Seq+ 103480 ChimerSeq TCGA FAWG TCGA_RNA-Seq FIG4-PPP1R14C FIG4 chr6 109716568 + PPP1R14C chr6 150214744 + Exonic hg38 SKCM TCGA-FS-A1Z0-06A 1 17 Out-of-frame Intra-chr q21 q25.1 Seq+ 103481 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R14C-AKIRIN2 PPP1R14C chr6 150143498 + AKIRIN2 chr6 87681763 - Exonic hg38 SKCM TCGA-FS-A1Z0-06A 2 1 Out-of-frame Intra-chr q25.1 q15 103482 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP7-ADGB AKAP7 chr6 131219808 + ADGB chr6 146635375 + Exonic hg38 SKCM TCGA-FS-A1Z0-06A 1 4 Out-of-frame Intra-chr q23.2 q24.3 103483 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIK3-PCSK7 SIK3 chr11 117098143 - PCSK7 chr11 117208064 - Exonic hg38 SKCM TCGA-FS-A1Z3-06A 1 3 Out-of-frame Intra-chr q23.3 q23.3 103484 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K8-LYZL2 MAP3K8 chr10 30459501 + LYZL2 chr10 30612024 - Exonic hg38 SKCM TCGA-FS-A1Z4-06A 59 158 Out-of-frame Intra-chr p11.23 STE:STE11 Tumor suppressor gene p11.23 Seq+ 103485 ChimerSeq TCGA FAWG TCGA_RNA-Seq GABRG1-DHX8 GABRG1 chr4 46123810 - DHX8 chr17 43489449 + Exonic hg38 SKCM TCGA-FS-A1Z4-06A 18 76 Out-of-frame Inter-chr p12 q21.31 Seq+ 103486 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDDC1-ALOX5AP PDDC1 chr11 767294 - ALOX5AP chr13 30752052 + Exonic hg38 SKCM TCGA-FS-A1Z4-06A 12 72 Out-of-frame Inter-chr q12.3 Seq+ 103487 ChimerSeq TCGA FAWG TCGA_RNA-Seq FMN1-KANSL1 FMN1 chr15 33064957 - KANSL1 chr17 46172232 - Exonic hg38 SKCM TCGA-FS-A1Z4-06A 19 24 5'UTR-5'UTR Inter-chr Seq+ 103488 ChimerSeq TCGA FAWG TCGA_RNA-Seq ILF3-OR1M1 ILF3 chr19 10679192 + OR1M1 chr19 9093232 + Exonic hg38 SKCM TCGA-FS-A1Z4-06A 5 32 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 103489 ChimerSeq TCGA FAWG TCGA_RNA-Seq GON4L-MED27 GON4L chr1 155771067 - MED27 chr9 131893992 - Exonic hg38 SKCM TCGA-FS-A1Z4-06A 2 21 In-Frame Inter-chr q22 q34.13 Seq+ 103490 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOS1AP-POM121C NOS1AP chr1 162300706 + POM121C chr7 75419442 - Exonic hg38 SKCM TCGA-FS-A1Z4-06A 6 3 Out-of-frame Inter-chr q23.3 q11.23 Seq+ 103491 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANSL1-FMN1 KANSL1 chr17 46192823 - FMN1 chr15 33092203 - Exonic hg38 SKCM TCGA-FS-A1Z4-06A 5 6 5'UTR-5'UTR Inter-chr Seq+ 103492 ChimerSeq TCGA FAWG TCGA_RNA-Seq ODF2L-F8 ODF2L chr1 86396033 - F8 chrX 154931676 - Exonic hg38 SKCM TCGA-FS-A1Z4-06A 2 10 5'UTR-CDS Inter-chr p22.3 q28 Seq+ 103493 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM2-ARFIP1 TRIM2 chr4 153152612 + ARFIP1 chr4 152863606 + Exonic hg38 SKCM TCGA-FS-A1Z4-06A 1 14 5'UTR-CDS Intra-chr q31.3 q31.3 Seq+ 103494 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2I-NOS1AP GTF2I chr7 74749451 + NOS1AP chr1 162300633 + Exonic hg38 SKCM TCGA-FS-A1Z4-06A 1 13 Out-of-frame Inter-chr q11.23 Transcription factor q23.3 103495 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOA-DNAH1 RHOA chr3 49411820 - DNAH1 chr3 52326140 + Exonic hg38 SKCM TCGA-FS-A1Z4-06A 3 2 5'UTR-CDS Intra-chr p21.31 Oncogene Tumor suppressor gene p21.1 103496 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAD2B-TP53I3 ATAD2B chr2 23926555 - TP53I3 chr2 24084860 - Exonic hg38 SKCM TCGA-FS-A1Z4-06A 2 5 CDS-5'UTR Intra-chr p23.3 p23.3 103497 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBTD2-C5orf58 UBTD2 chr5 172283596 - C5orf58 chr5 170245962 + Exonic hg38 SKCM TCGA-FS-A1Z4-06A 2 4 In-Frame Intra-chr q35.1 q35.1 Seq+ 103498 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKLN1-KCNMB1 MKLN1 chr7 131414710 + KCNMB1 chr5 170385471 - Exonic hg38 SKCM TCGA-FS-A1Z4-06A 1 4 CDS-5'UTR Inter-chr q32.3 q35.1 103499 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRE-ZNF57 BRE chr2 28025420 + ZNF57 chr19 2915522 + Exonic hg38 SKCM TCGA-FS-A1Z4-06A 1 3 Out-of-frame Inter-chr p13.3 Transcription factor 103500 ChimerSeq TCGA FAWG TCGA_RNA-Seq LLGL2-CDR2L LLGL2 chr17 75564507 + CDR2L chr17 74999504 + Exonic hg38 SKCM TCGA-FS-A1Z4-06A 1 1 In-Frame Intra-chr q25.1 q25.1 103501 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLLT1-MAD1L1 MLLT1 chr19 6230570 - MAD1L1 chr7 2002121 - Exonic hg38 SKCM TCGA-FS-A1Z4-06A 1 1 In-Frame Inter-chr p13.3 p22.3 Tumor suppressor gene 103502 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF185-DEPDC5 RNF185 chr22 31160303 + DEPDC5 chr22 31857445 + Exonic hg38 SKCM TCGA-FS-A1Z7-06A 4 27 5'UTR-5'UTR Intra-chr q12.2 q12.2 Seq+ 103503 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA3E-CEP41 SEMA3E chr7 83648428 - CEP41 chr7 130416966 - Exonic hg38 SKCM TCGA-FS-A1ZB-06A 14 29 In-Frame Intra-chr q21.11 q32.2 Seq+ 103504 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAP1-MACF1 CAP1 chr1 40040801 + MACF1 chr1 39468615 + Exonic hg38 SKCM TCGA-FS-A1ZC-06A 9 9 5'UTR-CDS Intra-chr p34.2 p34.3 Seq+ 103505 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP170-AKT3 CEP170 chr1 243185779 - AKT3 chr1 243573048 - Exonic hg38 SKCM TCGA-FS-A1ZD-06A 23 33 5'UTR-5'UTR Intra-chr AGC:Akt Oncogene Seq+ 103506 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD55-CENPL CD55 chr1 207336818 + CENPL chr1 173811306 - Exonic hg38 SKCM TCGA-FS-A1ZD-06A 7 82 5'UTR-5'UTR Intra-chr q32.2 q25.1 Seq+ 103507 ChimerSeq TCGA FAWG TCGA_RNA-Seq INPP5F-GRK5 INPP5F chr10 119726359 + GRK5 chr10 119380815 + Exonic hg38 SKCM TCGA-FS-A1ZD-06A 17 42 In-Frame Intra-chr q26.11 q26.11 Seq+ 103508 ChimerSeq TCGA FAWG TCGA_RNA-Seq CALM3-CHRNA4 CALM3 chr19 46601437 + CHRNA4 chr20 63344386 - Exonic hg38 SKCM TCGA-FS-A1ZD-06A 7 54 CDS-3'UTR Inter-chr q13.32 q13.33 Seq+ 103509 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3D19-INPP4B SH3D19 chr4 151226047 - INPP4B chr4 142431385 - Exonic hg38 SKCM TCGA-FS-A1ZD-06A 5 27 5'UTR-5'UTR Intra-chr q31.3 q31.21 Tumor suppressor gene Seq+ 103510 ChimerSeq TCGA FAWG TCGA_RNA-Seq CARD8-POLR3H CARD8 chr19 48249477 - POLR3H chr22 41530896 - Exonic hg38 SKCM TCGA-FS-A1ZD-06A 3 20 Out-of-frame Inter-chr q13.33 q13.2 103511 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADSS-BPNT1 ADSS chr1 244451635 - BPNT1 chr1 220089951 - Exonic hg38 SKCM TCGA-FS-A1ZD-06A 4 12 5'UTR-5'UTR Intra-chr q44 q41 Seq+ 103512 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPI2-AIMP2 WIPI2 chr7 5218014 + AIMP2 chr7 6023303 + Exonic hg38 SKCM TCGA-FS-A1ZE-06A 78 222 Out-of-frame Intra-chr p22.1 p22.1 Tumor suppressor gene Seq+ 103513 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGAPB-DSN1 RALGAPB chr20 38493132 + DSN1 chr20 36762548 - Exonic hg38 SKCM TCGA-FS-A1ZE-06A 32 185 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 103514 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1755-CNBD2 KIAA1755 chr20 38223538 - CNBD2 chr20 35957721 + Exonic hg38 SKCM TCGA-FS-A1ZE-06A 26 82 CDS-5'UTR Intra-chr q11.23 q11.23 Seq+ 103515 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX35-TOX2 DHX35 chr20 38962407 + TOX2 chr20 43973367 + Exonic hg38 SKCM TCGA-FS-A1ZE-06A 14 20 Out-of-frame Intra-chr q11.23 q13.12 Seq+ 103516 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF20-SLC25A17 TCF20 chr22 42343479 - SLC25A17 chr22 40779125 - Exonic hg38 SKCM TCGA-FS-A1ZE-06A 8 12 5'UTR-CDS Intra-chr Transcription factor q13.2 103517 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOGA1-RALY SOGA1 chr20 36862658 - RALY chr20 34031522 + Exonic hg38 SKCM TCGA-FS-A1ZE-06A 2 33 CDS-5'UTR Intra-chr q11.23 q11.22 Seq+ 103518 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPRE1-PLAGL2 MAPRE1 chr20 32820028 + PLAGL2 chr20 32202292 - Exonic hg38 SKCM TCGA-FS-A1ZE-06A 8 7 5'UTR-5'UTR Intra-chr q11.21 q11.21 Transcription factor Seq+ 103519 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF316-GNA12 ZNF316 chr7 6644593 + GNA12 chr7 2795143 - Exonic hg38 SKCM TCGA-FS-A1ZE-06A 3 18 Out-of-frame Intra-chr p22.1 Transcription factor p22.2 103520 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPP6-HIBADH MPP6 chr7 24680520 + HIBADH chr7 27649623 - Exonic hg38 SKCM TCGA-FS-A1ZE-06A 3 11 Out-of-frame Intra-chr p15.3 p15.2 Seq+ 103521 ChimerSeq TCGA FAWG TCGA_RNA-Seq POFUT1-MAPRE1 POFUT1 chr20 32216721 + MAPRE1 chr20 32825925 + Exonic hg38 SKCM TCGA-FS-A1ZE-06A 2 8 CDS-5'UTR Intra-chr q11.21 q11.21 Seq+ 103522 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASAP1-CDKN2B ASAP1 chr8 130358017 - CDKN2B chr9 22006247 - Exonic hg38 SKCM TCGA-FS-A1ZE-06A 1 6 In-Frame Inter-chr q24.22 p21.3 Oncogene Tumor suppressor gene Seq+ 103523 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD28-TM9SF4 ANKRD28 chr3 15795223 - TM9SF4 chr20 32133013 + Exonic hg38 SKCM TCGA-FS-A1ZF-06A 5 48 In-Frame Inter-chr p25.1 q11.21 Seq+ 103524 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL21B-MBD6 METTL21B chr12 57773128 + MBD6 chr12 57524029 + Exonic hg38 SKCM TCGA-FS-A1ZF-06A 2 9 Out-of-frame Intra-chr q13.3 Transcription factor Seq+ 103525 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO10-SLC12A7 MYO10 chr5 16794646 - SLC12A7 chr5 1094248 - Exonic hg38 SKCM TCGA-FS-A1ZG-06A 24 95 CDS-5'UTR Intra-chr p15.1 p15.33 Seq+ 103526 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAP-SEMA5A DAP chr5 10748175 - SEMA5A chr5 9380023 - Exonic hg38 SKCM TCGA-FS-A1ZG-06A 10 40 CDS-5'UTR Intra-chr p15.2 p15.31 Seq+ 103527 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM134B-ANKH FAM134B chr5 16565763 - ANKH chr5 14769191 - Exonic hg38 SKCM TCGA-FS-A1ZG-06A 5 12 Out-of-frame Intra-chr p15.2 Seq+ 103528 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF130-HRH2 RNF130 chr5 180040453 - HRH2 chr5 175682709 + Exonic hg38 SKCM TCGA-FS-A1ZJ-06A 21 51 CDS-5'UTR Intra-chr q35.3 q35.2 Seq+ 103529 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHCHD6-UBA5 CHCHD6 chr3 126730630 + UBA5 chr3 132665823 + Exonic hg38 SKCM TCGA-FS-A1ZJ-06A 17 40 In-Frame Intra-chr q21.3 q22.1 Seq+ 103530 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOXA3-PARP8 HOXA3 chr7 27140083 - PARP8 chr5 50759643 + Exonic hg38 SKCM TCGA-FS-A1ZJ-06A 11 50 5'UTR-CDS Inter-chr p15.2 Transcription factor q11.1 Seq+ 103531 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBL3-SUCLA2 UBL3 chr13 29849512 - SUCLA2 chr13 47997023 - Exonic hg38 SKCM TCGA-FS-A1ZJ-06A 14 30 In-Frame Intra-chr q12.3 q14.2 Seq+ 103532 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE8A-BNC1 PDE8A chr15 85100198 + BNC1 chr15 83258126 - Exonic hg38 SKCM TCGA-FS-A1ZJ-06A 8 32 Out-of-frame Intra-chr q25.3 q25.2 Transcription factor Seq+ 103533 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D1-LIMCH1 TBC1D1 chr4 37891348 + LIMCH1 chr4 41650393 + Exonic hg38 SKCM TCGA-FS-A1ZJ-06A 3 22 5'UTR-CDS Intra-chr p14 p13 Seq+ 103534 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRLF3-CRHR1 CRLF3 chr17 30824523 - CRHR1 chr17 45816463 + Exonic hg38 SKCM TCGA-FS-A1ZJ-06A 4 10 3'UTR-3'UTR Intra-chr q11.2 q21.31 Seq+ 103535 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXL2NB-PROS1 FOXL2NB chr3 138947464 + PROS1 chr3 93927407 - Exonic hg38 SKCM TCGA-FS-A1ZJ-06A 2 15 In-Frame Intra-chr q22.3 q11.1 103536 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEAD1-ARNTL TEAD1 chr11 12764434 + ARNTL chr11 13349945 + Exonic hg38 SKCM TCGA-FS-A1ZJ-06A 1 19 CDS-5'UTR Intra-chr p15.3 Transcription factor p15.3 Tumor suppressor gene Transcription factor 103537 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3R4-KALRN PIK3R4 chr3 130744486 - KALRN chr3 124395135 + Exonic hg38 SKCM TCGA-FS-A1ZJ-06A 4 6 Out-of-frame Intra-chr q22.1 Other:VPS15 q21.1 Seq+ 103538 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAD5-PSMA1 ATAD5 chr17 30855327 + PSMA1 chr11 14519041 - Exonic hg38 SKCM TCGA-FS-A1ZJ-06A 4 5 Out-of-frame Inter-chr q11.2 p15.2 Seq+ 103539 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIP2C-TBX18 DIP2C chr10 440871 - TBX18 chr6 84760356 - Exonic hg38 SKCM TCGA-FS-A1ZJ-06A 1 4 Out-of-frame Inter-chr p15.3 q14.3 Transcription factor Seq+ 103540 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC102B-AHCTF1 CCDC102B chr18 69011104 + AHCTF1 chr1 246843928 - Exonic hg38 SKCM TCGA-FS-A1ZJ-06A 1 3 Out-of-frame Inter-chr q22.1 q44 Transcription factor Seq+ 103541 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGCR2-GNB1L DGCR2 chr22 19064848 - GNB1L chr22 19788960 - Exonic hg38 SKCM TCGA-FS-A1ZK-06A 50 155 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 103542 ChimerSeq TCGA FAWG TCGA_RNA-Seq COMMD9-C11orf91 COMMD9 chr11 36278477 - C11orf91 chr11 33698514 - Exonic hg38 SKCM TCGA-FS-A1ZK-06A 46 149 Out-of-frame Intra-chr p13 p13 Seq+ 103543 ChimerSeq TCGA FAWG TCGA_RNA-Seq COMMD9-CD59 COMMD9 chr11 36278477 - CD59 chr11 33698514 - Exonic hg38 SKCM TCGA-FS-A1ZK-06A 46 149 CDS-3'UTR Intra-chr p13 p13 Seq+ 103544 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC3A2-GRAP2 SLC3A2 chr11 62885608 + GRAP2 chr22 39969411 + Exonic hg38 SKCM TCGA-FS-A1ZK-06A 17 117 In-Frame Inter-chr q12.3 q13.1 Seq+ 103545 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRAP2-BRD1 GRAP2 chr22 39969533 + BRD1 chr22 49799119 - Exonic hg38 SKCM TCGA-FS-A1ZK-06A 22 68 In-Frame Intra-chr q13.1 q13.33 Seq+ 103546 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF157-CA10 RNF157 chr17 76240153 - CA10 chr17 51633650 - Exonic hg38 SKCM TCGA-FS-A1ZK-06A 19 56 Out-of-frame Intra-chr q25.1 q22 Seq+ 103547 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRD1-SLC3A2 BRD1 chr22 49825730 - SLC3A2 chr11 62885177 + Exonic hg38 SKCM TCGA-FS-A1ZK-06A 10 81 5'UTR-5'UTR Inter-chr q13.33 q12.3 Seq+ 103548 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCD2-NUFIP2 SMARCD2 chr17 63834705 - NUFIP2 chr17 29267530 - Exonic hg38 SKCM TCGA-FS-A1ZK-06A 17 45 Out-of-frame Intra-chr q23.3 q11.2 Seq+ 103549 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM222B-CRLF3 FAM222B chr17 28812209 - CRLF3 chr17 30804108 - Exonic hg38 SKCM TCGA-FS-A1ZK-06A 8 72 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 103550 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBF1-TENM4 SBF1 chr22 50467338 - TENM4 chr11 78757021 - Exonic hg38 SKCM TCGA-FS-A1ZK-06A 12 43 Out-of-frame Inter-chr q13.33 q14.1 Seq+ 103551 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF814-EIF3B ZNF814 chr19 57888767 - EIF3B chr7 2376950 + Exonic hg38 SKCM TCGA-FS-A1ZK-06A 8 34 In-Frame Inter-chr q13.43 Transcription factor p22.3 103552 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBTD1-PART1 MBTD1 chr17 51259143 - PART1 chr5 60529404 + Exonic hg38 SKCM TCGA-FS-A1ZK-06A 7 30 5'UTR-5'UTR Inter-chr q21.33 q12.1 Seq+ 103553 ChimerSeq TCGA FAWG TCGA_RNA-Seq APPBP2-CA10 APPBP2 chr17 60500399 - CA10 chr17 51633650 - Exonic hg38 SKCM TCGA-FS-A1ZK-06A 6 18 Out-of-frame Intra-chr q23.2 q22 Seq+ 103554 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHIC2-SIPA1L3 CHIC2 chr4 54048955 - SIPA1L3 chr19 38029089 + Exonic hg38 SKCM TCGA-FS-A1ZK-06A 6 14 CDS-5'UTR Inter-chr q12 q13.13 Seq+ 103555 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUN1-ABHD16A SUN1 chr7 816673 + ABHD16A chr6 31691918 - Exonic hg38 SKCM TCGA-FS-A1ZK-06A 9 0 5'UTR-5'UTR Inter-chr p22.3 Seq+ 103556 ChimerSeq TCGA FAWG TCGA_RNA-Seq TJP2-RPRD2 TJP2 chr9 69174432 + RPRD2 chr1 150457288 + Exonic hg38 SKCM TCGA-FS-A1ZK-06A 1 17 In-Frame Inter-chr q21.11 q21.2 Seq+ 103557 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD11-CPNE7 ANKRD11 chr16 89490245 - CPNE7 chr16 89591007 + Exonic hg38 SKCM TCGA-FS-A1ZK-06A 3 8 5'UTR-CDS Intra-chr q24.3 q24.3 Tumor suppressor gene Seq+ 103558 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPN5-OR7E1P CAPN5 chr11 77116303 + OR7E1P chr11 67975018 - Exonic hg38 SKCM TCGA-FS-A1ZK-06A 3 6 Out-of-frame Intra-chr q13.5 q13.2 Seq+ 103559 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPECC1L-SQLE SPECC1L chr22 24369320 + SQLE chr8 125003176 + Exonic hg38 SKCM TCGA-FS-A1ZK-06A 1 13 In-Frame Inter-chr q11.23 q24.13 103560 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBFOX2-MKL1 RBFOX2 chr22 35746473 - MKL1 chr22 40463286 - Exonic hg38 SKCM TCGA-FS-A1ZK-06A 2 8 Out-of-frame Intra-chr q13.2 Seq+ 103561 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYN3-C6orf48 SYN3 chr22 32596674 - C6orf48 chr6 31835411 + Exonic hg38 SKCM TCGA-FS-A1ZK-06A 2 8 Out-of-frame Inter-chr q12.3 Seq+ 103562 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNU13-FGF4 SNU13 chr22 41688794 - FGF4 chr11 69773485 - Exonic hg38 SKCM TCGA-FS-A1ZK-06A 1 9 In-Frame Inter-chr q13.2 q13.3 103563 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNAZ-TDH GNAZ chr22 23070570 + TDH chr8 11364720 + Exonic hg38 SKCM TCGA-FS-A1ZK-06A 1 8 5'UTR-5'UTR Inter-chr q11.22 p23.1 103564 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANGAP1-PBX2 RANGAP1 chr22 41257948 - PBX2 chr6 32188504 - Exonic hg38 SKCM TCGA-FS-A1ZK-06A 1 8 CDS-5'UTR Inter-chr q13.2 p21.32 Transcription factor 103565 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED13-SUMO2P17 MED13 chr17 62052537 - SUMO2P17 chr17 48879345 - Exonic hg38 SKCM TCGA-FS-A1ZM-06A 5 9 Out-of-frame Intra-chr q23.2 q21.32 103566 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBAC2-SARM1 UBAC2 chr13 99200939 + SARM1 chr17 28384357 + Exonic hg38 SKCM TCGA-FS-A1ZM-06A 3 7 Out-of-frame Inter-chr q32.3 q11.2 Seq+ 103567 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOXC10-C6orf89 HOXC10 chr12 53986010 + C6orf89 chr6 36879008 + Exonic hg38 SKCM TCGA-FS-A1ZM-06A 1 5 CDS-5'UTR Inter-chr q13.13 Transcription factor p21.2 103568 ChimerSeq TCGA FAWG TCGA_RNA-Seq FARP1-GALR2 FARP1 chr13 98143492 + GALR2 chr17 76076636 + Exonic hg38 SKCM TCGA-FS-A1ZM-06A 1 2 5'UTR-CDS Inter-chr q32.2 q25.1 103569 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM26-TJAP1 TRIM26 chr6 30213305 - TJAP1 chr6 43497881 + Exonic hg38 SKCM TCGA-FS-A1ZN-01A 17 22 5'UTR-5'UTR Intra-chr p21.1 Seq+ 103570 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELOVL5-HMGCLL1 ELOVL5 chr6 53348817 - HMGCLL1 chr6 55499299 - Exonic hg38 SKCM TCGA-FS-A1ZN-01A 1 4 5'UTR-CDS Intra-chr p12.1 p12.1 Seq+ 103571 ChimerSeq TCGA FAWG TCGA_RNA-Seq C9orf85-FXN C9orf85 chr9 71911836 + FXN chr9 69064938 + Exonic hg38 SKCM TCGA-FS-A1ZP-06A 30 146 In-Frame Intra-chr q21.13 q21.11 Tumor suppressor gene Seq+ 103572 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR180-GPC6 GPR180 chr13 94605549 + GPC6 chr13 94382414 + Exonic hg38 SKCM TCGA-FS-A1ZQ-06A 4 17 Out-of-frame Intra-chr q32.1 q31.3 Seq+ 103573 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA6-NUCKS1 PLEKHA6 chr1 204367799 - NUCKS1 chr1 205729621 - Exonic hg38 SKCM TCGA-FS-A1ZQ-06A 3 20 5'UTR-CDS Intra-chr q32.1 q32.1 Seq+ 103574 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCC5-SPRR4 ABCC5 chr3 183927330 - SPRR4 chr1 152971871 + Exonic hg38 SKCM TCGA-FS-A1ZQ-06A 1 15 CDS-5'UTR Inter-chr q27.1 q21.3 Seq+ 103575 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRCP-DLG2 PRCP chr11 82853177 - DLG2 chr11 84099047 - Exonic hg38 SKCM TCGA-FS-A1ZS-06A 2 16 In-Frame Intra-chr q14.1 q14.1 Seq+ 103576 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIST1H2AC-TNFRSF21 HIST1H2AC chr6 26124749 + TNFRSF21 chr6 47286595 - Exonic hg38 SKCM TCGA-FS-A1ZT-06A 3 43 3'UTR-CDS Intra-chr p22.2 p12.3 Seq+ 103577 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSF1-ARRB1 RSF1 chr11 77672042 - ARRB1 chr11 75290039 - Exonic hg38 SKCM TCGA-FS-A1ZT-06A 5 15 Out-of-frame Intra-chr q14.1 q13.4 Seq+ 103578 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF4-ENPP7P8 TAF4 chr20 62064451 - ENPP7P8 chr11 71731422 + Exonic hg38 SKCM TCGA-FS-A1ZT-06A 3 9 Out-of-frame Inter-chr q13.4 Seq+ 103579 ChimerSeq TCGA FAWG TCGA_RNA-Seq CALD1-SLC41A1 CALD1 chr7 134891673 + SLC41A1 chr1 205811087 - Exonic hg38 SKCM TCGA-FS-A1ZU-06A 32 82 CDS-5'UTR Inter-chr q33 q32.1 Seq+ 103580 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC27-BRAF CDC27 chr17 47129393 - BRAF chr7 140787584 - Exonic hg38 SKCM TCGA-FS-A1ZU-06A 10 28 In-Frame Inter-chr q21.32 q34 TKL:RAF Oncogene Seq+ 103581 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC73-KCNT2 CDC73 chr1 193152444 + KCNT2 chr1 196479238 - Exonic hg38 SKCM TCGA-FS-A1ZU-06A 1 7 In-Frame Intra-chr q31.2 Oncogene Tumor suppressor gene q31.3 103582 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC18-TSGA13 TNRC18 chr7 5374055 - TSGA13 chr7 130671788 - Exonic hg38 SKCM TCGA-FS-A1ZY-06A 5 37 Out-of-frame Intra-chr p22.1 q32.2 Seq+ 103583 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC22C-MRPS28 SEC22C chr3 42582193 - MRPS28 chr8 79919148 - Exonic hg38 SKCM TCGA-FS-A1ZZ-06A 32 183 5'UTR-CDS Inter-chr p22.1 q21.13 Seq+ 103584 ChimerSeq TCGA FAWG TCGA_RNA-Seq OXSR1-ATXN7 OXSR1 chr3 38190839 + ATXN7 chr3 63952379 + Exonic hg38 SKCM TCGA-FS-A1ZZ-06A 7 26 In-Frame Intra-chr p22.2 p14.1 Seq+ 103585 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHR-CUL4B AHR chr7 17299329 + CUL4B chrX 120574630 - Exonic hg38 SKCM TCGA-FS-A1ZZ-06A 5 23 CDS-5'UTR Inter-chr p21.1 Tumor suppressor gene Transcription factor q24 Seq+ 103586 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS28-NKAIN3 MRPS28 chr8 80002999 - NKAIN3 chr8 62965354 + Exonic hg38 SKCM TCGA-FS-A1ZZ-06A 4 13 Out-of-frame Intra-chr q21.13 q12.3 Seq+ 103587 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACOT7-NPHP4 ACOT7 chr1 6349749 - NPHP4 chr1 5933329 - Exonic hg38 SKCM TCGA-FS-A4F0-06A 3 16 In-Frame Intra-chr p36.31 p36.31 Seq+ 103588 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1CB-EIF2B4 PPP1CB chr2 28752176 + EIF2B4 chr2 27364599 - Exonic hg38 SKCM TCGA-FS-A4F0-06A 2 1 In-Frame Intra-chr p23.2 p23.3 103589 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCY2-CLPTM1L ADCY2 chr5 7789800 + CLPTM1L chr5 1320731 - Exonic hg38 SKCM TCGA-FS-A4F4-06A 27 190 CDS-3'UTR Intra-chr p15.31 p15.33 Seq+ 103590 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAV2-ERC1 NAV2 chr11 19892594 + ERC1 chr12 1490093 + Exonic hg38 SKCM TCGA-FS-A4F4-06A 42 78 Out-of-frame Inter-chr p15.1 Seq+ 103591 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARFGAP3-FBLN1 ARFGAP3 chr22 42857114 - FBLN1 chr22 45600307 + Exonic hg38 SKCM TCGA-FS-A4F4-06A 17 121 Out-of-frame Intra-chr q13.2 q13.31 Tumor suppressor gene Seq+ 103592 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D22A-SREBF2 TBC1D22A chr22 46912188 + SREBF2 chr22 41866831 + Exonic hg38 SKCM TCGA-FS-A4F4-06A 14 123 In-Frame Intra-chr q13.31 q13.2 Transcription factor Seq+ 103593 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPO-CDH18 TSPO chr22 43161190 + CDH18 chr5 19981178 - Exonic hg38 SKCM TCGA-FS-A4F4-06A 11 126 5'UTR-5'UTR Inter-chr q13.2 p14.3 Seq+ 103594 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPO-LZTR1 TSPO chr22 43151604 + LZTR1 chr22 20987504 + Exonic hg38 SKCM TCGA-FS-A4F4-06A 14 57 5'UTR-CDS Intra-chr q13.2 q11.21 Seq+ 103595 ChimerSeq TCGA FAWG TCGA_RNA-Seq EP300-FBLN1 EP300 chr22 41155113 + FBLN1 chr22 45600307 + Exonic hg38 SKCM TCGA-FS-A4F4-06A 13 44 Out-of-frame Intra-chr q13.2 Oncogene q13.31 Tumor suppressor gene Seq+ 103596 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRK3-EP300 GRK3 chr22 25565153 + EP300 chr22 41154995 + Exonic hg38 SKCM TCGA-FS-A4F4-06A 11 37 Out-of-frame Intra-chr q12.1 q13.2 Oncogene 103597 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIO-SLC9A3 TRIO chr5 14394130 + SLC9A3 chr5 492071 - Exonic hg38 SKCM TCGA-FS-A4F4-06A 13 26 Out-of-frame Intra-chr p15.2 p15.33 Seq+ 103598 ChimerSeq TCGA FAWG TCGA_RNA-Seq SULT4A1-TFIP11 SULT4A1 chr22 43862214 - TFIP11 chr22 26503793 - Exonic hg38 SKCM TCGA-FS-A4F4-06A 9 37 In-Frame Intra-chr q13.31 q12.1 Seq+ 103599 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAI14-CYB5R3 RAI14 chr5 34686955 + CYB5R3 chr22 42619945 - Exonic hg38 SKCM TCGA-FS-A4F4-06A 10 28 Out-of-frame Inter-chr p13.2 q13.2 Seq+ 103600 ChimerSeq TCGA FAWG TCGA_RNA-Seq THAP7-A4GALT THAP7 chr22 21000647 - A4GALT chr22 42695631 - Exonic hg38 SKCM TCGA-FS-A4F4-06A 5 47 CDS-5'UTR Intra-chr q11.21 Transcription factor q13.2 Seq+ 103601 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM109B-RAI14 FAM109B chr22 42075652 + RAI14 chr5 34686872 + Exonic hg38 SKCM TCGA-FS-A4F4-06A 8 30 Out-of-frame Inter-chr q13.2 p13.2 Seq+ 103602 ChimerSeq TCGA FAWG TCGA_RNA-Seq PI4KA-PHF21B PI4KA chr22 20834562 - PHF21B chr22 44969205 - Exonic hg38 SKCM TCGA-FS-A4F4-06A 6 24 CDS-5'UTR Intra-chr q11.21 q13.31 103603 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLA2G6-TMEM184B PLA2G6 chr22 38181784 - TMEM184B chr22 38231334 - Exonic hg38 SKCM TCGA-FS-A4F4-06A 10 4 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 103604 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANGAP1-CERK RANGAP1 chr22 41268097 - CERK chr22 46687206 - Exonic hg38 SKCM TCGA-FS-A4F4-06A 5 18 Out-of-frame Intra-chr q13.2 q13.31 Seq+ 103605 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYB5R3-RBX1 CYB5R3 chr22 42619837 - RBX1 chr22 40964047 + Exonic hg38 SKCM TCGA-FS-A4F4-06A 4 20 In-Frame Intra-chr q13.2 q13.2 Seq+ 103606 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICALL1-PRLR MICALL1 chr22 37933112 + PRLR chr5 35152973 - Exonic hg38 SKCM TCGA-FS-A4F4-06A 2 21 CDS-5'UTR Inter-chr q13.1 p13.2 103607 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB18-KIAA1549L RAB18 chr10 27509930 + KIAA1549L chr11 33552108 + Exonic hg38 SKCM TCGA-FS-A4F4-06A 1 21 In-Frame Inter-chr p12.1 p13 103608 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF2-EFCAB6 NF2 chr22 29655676 + EFCAB6 chr22 43687581 - Exonic hg38 SKCM TCGA-FS-A4F4-06A 2 13 In-Frame Intra-chr q12.2 Oncogene Tumor suppressor gene q13.31 Seq+ 103609 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR70-GRAMD4 WDR70 chr5 37605238 + GRAMD4 chr22 46626751 + Exonic hg38 SKCM TCGA-FS-A4F4-06A 4 3 Out-of-frame Inter-chr p13.2 q13.31 Seq+ 103610 ChimerSeq TCGA FAWG TCGA_RNA-Seq XYLT1-HS3ST4 XYLT1 chr16 17198212 - HS3ST4 chr16 26135612 + Exonic hg38 SKCM TCGA-FS-A4F4-06A 2 9 5'UTR-CDS Intra-chr p12.3 p12.1 Seq+ 103611 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFCAB6-CYB5R3 EFCAB6 chr22 43716848 - CYB5R3 chr22 42636846 - Exonic hg38 SKCM TCGA-FS-A4F4-06A 3 3 In-Frame Intra-chr q13.31 q13.2 Seq+ 103612 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM118A-ST13 FAM118A chr22 45310183 + ST13 chr22 40850880 - Exonic hg38 SKCM TCGA-FS-A4F4-06A 1 9 5'UTR-CDS Intra-chr q13.31 q13.2 Tumor suppressor gene 103613 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARVB-PPARA PARVB chr22 44024451 + PPARA chr22 46151888 + Exonic hg38 SKCM TCGA-FS-A4F4-06A 2 5 CDS-5'UTR Intra-chr q13.31 q13.31 Tumor suppressor gene Transcription factor Seq+ 103614 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANGAP1-ARHGAP8 RANGAP1 chr22 41274600 - ARHGAP8 chr22 44786457 + Exonic hg38 SKCM TCGA-FS-A4F4-06A 2 5 CDS-5'UTR Intra-chr q13.2 q13.31 Seq+ 103615 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM19A5-MCAT FAM19A5 chr22 48576571 + MCAT chr22 43137298 - Exonic hg38 SKCM TCGA-FS-A4F4-06A 1 8 Out-of-frame Intra-chr q13.32 q13.2 103616 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRMT3-MALRD1 PRMT3 chr11 20494254 + MALRD1 chr10 19387528 + Exonic hg38 SKCM TCGA-FS-A4F4-06A 1 8 In-Frame Inter-chr p15.1 Transcription factor p12.31 103617 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCY2-SAMM50 ADCY2 chr5 7414770 + SAMM50 chr22 43963286 + Exonic hg38 SKCM TCGA-FS-A4F4-06A 2 3 In-Frame Inter-chr p15.31 q13.31 Seq+ 103618 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D22A-ARFGAP3 TBC1D22A chr22 46793841 + ARFGAP3 chr22 42823702 - Exonic hg38 SKCM TCGA-FS-A4F4-06A 1 6 In-Frame Intra-chr q13.31 q13.2 Seq+ 103619 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1644-TTLL12 KIAA1644 chr22 44300879 - TTLL12 chr22 43183149 - Exonic hg38 SKCM TCGA-FS-A4F4-06A 1 3 Out-of-frame Intra-chr q13.31 q13.2 103620 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRZ1-SRRM3 PTPRZ1 chr7 121928221 + SRRM3 chr7 76235028 + Exonic hg38 SKCM TCGA-FS-A4F4-06A 1 3 CDS-5'UTR Intra-chr q31.32 q11.23 Seq+ 103621 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARP11-PIK3C2G PARP11 chr12 3863836 - PIK3C2G chr12 18640429 + Exonic hg38 SKCM TCGA-FS-A4F9-06A 2 15 5'UTR-CDS Intra-chr p13.32 p12.3 Seq+ 103622 ChimerSeq TCGA FAWG TCGA_RNA-Seq API5-GANC API5 chr11 43322136 + GANC chr15 42306546 + Exonic hg38 SKCM TCGA-FS-A4FB-06A 11 71 In-Frame Inter-chr p12 q15.1 Seq+ 103623 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLCN3P1-SLC1A1 CLCN3P1 chr9 14987893 - SLC1A1 chr9 4572204 + Exonic hg38 SKCM TCGA-FS-A4FB-06A 5 18 Out-of-frame Intra-chr p22.3 p24.2 103624 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLAT-C12orf66 PLAT chr8 42207494 - C12orf66 chr12 64215963 - Exonic hg38 SKCM TCGA-FS-A4FB-06A 1 1 5'UTR-CDS Inter-chr p11.21 q14.2 Seq+ 103625 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCA-CACNG1 PRKCA chr17 66689047 + CACNG1 chr17 67053996 + Exonic hg38 SKCM TCGA-FS-A4FD-06A 4 17 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 103626 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEAK1-NRG4 PEAK1 chr15 77252367 - NRG4 chr15 75943654 - Exonic hg38 SKCM TCGA-FW-A3I3-06A 21 73 5'UTR-CDS Intra-chr q24.3 q24.2 Seq+ 103627 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO33-SERINC5 FBXO33 chr14 39431564 - SERINC5 chr5 80175047 - Exonic hg38 SKCM TCGA-FW-A3I3-06A 6 22 Out-of-frame Inter-chr q21.1 q14.1 Seq+ 103628 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERINC5-MYO10 SERINC5 chr5 80202886 - MYO10 chr5 16704685 - Exonic hg38 SKCM TCGA-FW-A3I3-06A 7 12 In-Frame Intra-chr q14.1 p15.1 Seq+ 103629 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSF-NFE2L1 NSF chr17 46704854 + NFE2L1 chr17 48056386 + Exonic hg38 SKCM TCGA-FW-A3I3-06A 6 8 3'UTR-CDS Intra-chr q21.32 Transcription factor Seq+ 103630 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD27-RNF38 ANKRD27 chr19 32649682 - RNF38 chr9 36376127 - Exonic hg38 SKCM TCGA-FW-A3I3-06A 5 6 In-Frame Inter-chr q13.11 p13.2 Seq+ 103631 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPHN-PRKCH GPHN chr14 66508591 + PRKCH chr14 61391225 + Exonic hg38 SKCM TCGA-FW-A3I3-06A 2 7 Out-of-frame Intra-chr q23.3 q23.1 Seq+ 103632 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCTD15-MSI2 KCTD15 chr19 33811552 + MSI2 chr17 57615970 + Exonic hg38 SKCM TCGA-FW-A3I3-06A 1 10 In-Frame Inter-chr q13.11 q22 Seq+ 103633 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM2-LRBA TRIM2 chr4 153152612 + LRBA chr4 150817257 - Exonic hg38 SKCM TCGA-FW-A3R5-06A 36 138 5'UTR-CDS Intra-chr q31.3 q31.3 Seq+ 103634 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF420-SPINT2 ZNF420 chr19 37078570 + SPINT2 chr19 38283627 + Exonic hg38 SKCM TCGA-FW-A3R5-06A 2 4 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.2 Tumor suppressor gene Seq+ 103635 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPRIP-P4HA1 MPRIP chr17 17042971 + P4HA1 chr10 73030370 - Exonic hg38 SKCM TCGA-FW-A3TU-06A 2 11 Out-of-frame Inter-chr p11.2 q22.1 Seq+ 103636 ChimerSeq TCGA FAWG TCGA_RNA-Seq GIT2-SMYD5 GIT2 chr12 109991627 - SMYD5 chr2 73218861 + Exonic hg38 SKCM TCGA-FW-A3TV-06A 5 57 In-Frame Inter-chr q24.11 p13.2 Seq+ 103637 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF3-SVIL TAF3 chr10 7824560 + SVIL chr10 29569312 - Exonic hg38 SKCM TCGA-FW-A3TV-06A 6 33 CDS-5'UTR Intra-chr p14 p11.23 Seq+ 103638 ChimerSeq TCGA FAWG TCGA_RNA-Seq HCG4P5-APOD HCG4P5 chr6 29942925 - APOD chr3 195579477 - Exonic hg38 SKCM TCGA-FW-A3TV-06A 3 8 Out-of-frame Inter-chr q29 Seq+ 103639 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC3-ITM2B TTC3 chr21 37087875 + ITM2B chr13 48253808 + Exonic hg38 SKCM TCGA-FW-A5DX-01A 12 40 Out-of-frame Inter-chr q22.13 q14.2 Seq+ 103640 ChimerSeq TCGA FAWG TCGA_RNA-Seq DROSHA-TERT DROSHA chr5 31421272 - TERT chr5 1282624 - Exonic hg38 SKCM TCGA-FW-A5DX-01A 4 43 Out-of-frame Intra-chr p13.3 p15.33 Oncogene Seq+ 103641 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITM2B-TTC3 ITM2B chr13 48261321 + TTC3 chr21 37094005 + Exonic hg38 SKCM TCGA-FW-A5DX-01A 1 28 3'UTR-CDS Inter-chr q14.2 q22.13 Seq+ 103642 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC42BPB-RGS6 CDC42BPB chr14 102983556 - RGS6 chr14 72562417 + Exonic hg38 SKCM TCGA-FW-A5DX-01A 1 5 In-Frame Intra-chr q32.32 q24.2 Seq+ 103643 ChimerSeq TCGA FAWG TCGA_RNA-Seq ECE1-TRAF3IP2 ECE1 chr1 21345376 - TRAF3IP2 chr6 111580389 - Exonic hg38 SKCM TCGA-GF-A2C7-01A 16 46 Out-of-frame Inter-chr p36.12 q21 103644 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIER1-LEPR MIER1 chr1 66940052 + LEPR chr1 65570473 + Exonic hg38 SKCM TCGA-GF-A2C7-01A 2 7 In-Frame Intra-chr p31.3 p31.3 Seq+ 103645 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB32-ADGB RAB32 chr6 146544121 + ADGB chr6 146666816 + Exonic hg38 SKCM TCGA-GF-A2C7-01A 1 4 Out-of-frame Intra-chr q24.3 q24.3 103646 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANPEP-MMP14 ANPEP chr15 89790460 - MMP14 chr14 22844371 + Exonic hg38 SKCM TCGA-GF-A3OT-06A 1 16 In-Frame Inter-chr q26.1 q11.2 103647 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTN4RL1-IGHJ4 RTN4RL1 chr17 1937739 - IGHJ4 chr14 105864257 - Exonic hg38 SKCM TCGA-GF-A4EO-06A 75 0 Out-of-frame Inter-chr p13.3 103648 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE12-ROBO2 PDE12 chr3 57559388 + ROBO2 chr3 77622227 + Exonic hg38 SKCM TCGA-GF-A4EO-06A 3 5 Out-of-frame Intra-chr p14.3 p12.3 Seq+ 103649 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANGO6-CFDP1 TANGO6 chr16 68843711 + CFDP1 chr16 75305182 - Exonic hg38 SKCM TCGA-GF-A6C8-06A 2 84 Out-of-frame Intra-chr q22.1 q23.1 Seq+ 103650 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRELID2-PAIP1 PRELID2 chr5 145764931 - PAIP1 chr5 43555999 - Exonic hg38 SKCM TCGA-GF-A6C8-06A 1 5 3'UTR-CDS Intra-chr q32 p12 103651 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP5-LSAMP ARHGAP5 chr14 32077435 + LSAMP chr3 116444955 - Exonic hg38 SKCM TCGA-GF-A6C9-06A 3 30 5'UTR-CDS Inter-chr q12 q13.31 Tumor suppressor gene Seq+ 103652 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMTM7-FHIT CMTM7 chr3 32454542 + FHIT chr3 60536979 - Exonic hg38 SKCM TCGA-GF-A6C9-06A 1 6 3'UTR-5'UTR Intra-chr p22.3 p14.2 Tumor suppressor gene 103653 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARB-OSBPL10 RARB chr3 25174575 + OSBPL10 chr3 31879830 - Exonic hg38 SKCM TCGA-GF-A6C9-06A 1 6 Out-of-frame Intra-chr p24.2 Tumor suppressor gene Transcription factor p22.3 Seq+ 103654 ChimerSeq TCGA FAWG TCGA_RNA-Seq IRF2-ENPP6 IRF2 chr4 184474379 - ENPP6 chr4 184153733 - Exonic hg38 SKCM TCGA-GF-A769-01A 23 107 5'UTR-CDS Intra-chr q35.1 Transcription factor q35.1 Seq+ 103655 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTSS1-NSD3 MTSS1 chr8 124699526 - NSD3 chr8 38348215 - Exonic hg38 SKCM TCGA-GF-A769-01A 17 72 CDS-5'UTR Intra-chr q24.13 Tumor suppressor gene p11.23 Tumor suppressor gene 103656 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP1-NEMP1 LRP1 chr12 57143798 + NEMP1 chr12 57072912 - Exonic hg38 SKCM TCGA-GF-A769-01A 5 34 In-Frame Intra-chr q13.3 q13.3 103657 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMAT3-TP63 ZMAT3 chr3 179067483 - TP63 chr3 189737740 + Exonic hg38 SKCM TCGA-GF-A769-01A 7 17 Out-of-frame Intra-chr q26.32 q28 Tumor suppressor gene Transcription factor Seq+ 103658 ChimerSeq TCGA FAWG TCGA_RNA-Seq IREB2-DIAPH3 IREB2 chr15 78439881 + DIAPH3 chr13 59924870 - Exonic hg38 SKCM TCGA-GN-A262-06A 18 26 In-Frame Inter-chr q25.1 q21.2 Seq+ 103659 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPF4B-F13A1 PRPF4B chr6 4021466 + F13A1 chr6 6197326 - Exonic hg38 SKCM TCGA-GN-A264-06A 161 223 In-Frame Intra-chr p25.2 p25.1 Seq+ 103660 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC4-PDE11A HDAC4 chr2 239352678 - PDE11A chr2 177905187 - Exonic hg38 SKCM TCGA-GN-A264-06A 5 32 Out-of-frame Intra-chr q37.3 q31.2 Seq+ 103661 ChimerSeq TCGA FAWG TCGA_RNA-Seq FMNL3-CPNE8 FMNL3 chr12 49707055 - CPNE8 chr12 38677554 - Exonic hg38 SKCM TCGA-GN-A264-06A 3 8 Out-of-frame Intra-chr q13.12 q12 Seq+ 103662 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPBL-SPEF2 NIPBL chr5 37046199 + SPEF2 chr5 35641431 + Exonic hg38 SKCM TCGA-GN-A264-06A 2 8 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 103663 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH2-REG4 NOTCH2 chr1 119953543 - REG4 chr1 119803165 - Exonic hg38 SKCM TCGA-GN-A264-06A 2 0 In-Frame Intra-chr p12 Oncogene Tumor suppressor gene p12 Seq+ 103664 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP13-ADAMTS7P4 AKAP13 chr15 85380798 + ADAMTS7P4 chr15 85314984 - Exonic hg38 SKCM TCGA-GN-A265-06A 6 49 Out-of-frame Intra-chr q25.3 q25.3 103665 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMX1-TRIM9 TMX1 chr14 51243971 + TRIM9 chr14 51000840 - Exonic hg38 SKCM TCGA-GN-A265-06A 2 18 In-Frame Intra-chr q22.1 q22.1 Seq+ 103666 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF3C5-PHF2 GTF3C5 chr9 133054809 + PHF2 chr9 93673585 + Exonic hg38 SKCM TCGA-GN-A265-06A 2 2 Out-of-frame Intra-chr q34.13 q22.31 Seq+ 103667 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC34-MIER2 CDC34 chr19 532108 + MIER2 chr19 336173 - Exonic hg38 SKCM TCGA-GN-A265-06A 1 3 In-Frame Intra-chr p13.3 p13.3 103668 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRRM2-BCAR4 SRRM2 chr16 2760499 + BCAR4 chr16 11821755 - Exonic hg38 SKCM TCGA-GN-A266-06A 2 21 CDS-3'UTR Intra-chr p13.3 p13.13 Seq+ 103669 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK1IP1-MEP1A PAK1IP1 chr6 10702639 + MEP1A chr6 46819529 + Exonic hg38 SKCM TCGA-GN-A268-06A 27 183 3'UTR-CDS Intra-chr p24.2 p12.3 Seq+ 103670 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBF2-MRGPRX3 SBF2 chr11 10294015 - MRGPRX3 chr11 18132614 + Exonic hg38 SKCM TCGA-GN-A268-06A 3 10 CDS-5'UTR Intra-chr p15.4 p15.1 Seq+ 103671 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC33-RCN2 CCDC33 chr15 74203098 + RCN2 chr15 76943758 + Exonic hg38 SKCM TCGA-GN-A26A-06A 2 77 5'UTR-CDS Intra-chr q24.1 q24.3 103672 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEF2A-WDR61 MEF2A chr15 99566104 + WDR61 chr15 78295725 - Exonic hg38 SKCM TCGA-GN-A26A-06A 6 34 5'UTR-5'UTR Intra-chr q26.3 Transcription factor q25.1 Seq+ 103673 ChimerSeq TCGA FAWG TCGA_RNA-Seq POGZ-HHIPL2 POGZ chr1 151408694 - HHIPL2 chr1 222538774 - Exonic hg38 SKCM TCGA-GN-A26A-06A 7 19 Out-of-frame Intra-chr q21.3 q41 Seq+ 103674 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS17-AKAP13 ADAMTS17 chr15 99993048 - AKAP13 chr15 85721991 + Exonic hg38 SKCM TCGA-GN-A26A-06A 1 36 In-Frame Intra-chr q26.3 q25.3 Seq+ 103675 ChimerSeq TCGA FAWG TCGA_RNA-Seq HEXA-MYO9A HEXA chr15 72375720 - MYO9A chr15 71916492 - Exonic hg38 SKCM TCGA-GN-A26A-06A 2 10 Out-of-frame Intra-chr q23 q23 Seq+ 103676 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX27-ILF2 SNX27 chr1 151693483 + ILF2 chr1 153670230 - Exonic hg38 SKCM TCGA-GN-A26A-06A 1 6 Out-of-frame Intra-chr q21.3 q21.3 103677 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM103A1-IGF1R FAM103A1 chr15 82987384 + IGF1R chr15 98891325 + Exonic hg38 SKCM TCGA-GN-A26A-06A 1 4 Out-of-frame Intra-chr q25.2 q26.3 TK:InsR Oncogene 103678 ChimerSeq TCGA FAWG TCGA_RNA-Seq S100A6-VIM S100A6 chr1 153535949 - VIM chr10 17235169 + Exonic hg38 SKCM TCGA-GN-A26C-01A 1 10 5'UTR-CDS Inter-chr q21.3 p13 Tumor suppressor gene 103679 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSPG2-VIM HSPG2 chr1 21878186 - VIM chr10 17234693 + Exonic hg38 SKCM TCGA-GN-A26C-01A 1 9 In-Frame Inter-chr p36.12 p13 Tumor suppressor gene 103680 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA2-ST18 NCOA2 chr8 70296744 - ST18 chr8 52246664 - Exonic hg38 SKCM TCGA-GN-A26C-01A 1 6 5'UTR-5'UTR Intra-chr q13.3 Oncogene Transcription factor q11.23 Transcription factor Seq+ 103681 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASSF3-ITGA7 RASSF3 chr12 64610743 + ITGA7 chr12 55685288 - Exonic hg38 SKCM TCGA-GN-A26D-06A 891 3000 In-Frame Intra-chr q14.2 Tumor suppressor gene q13.2 Tumor suppressor gene Seq+ 103682 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNS-FAM19A2 GNS chr12 64744809 - FAM19A2 chr12 62207250 - Exonic hg38 SKCM TCGA-GN-A26D-06A 158 896 Out-of-frame Intra-chr q14.3 q14.1 Seq+ 103683 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT2-RPS11P6 CNOT2 chr12 70278274 + RPS11P6 chr12 64389033 + Exonic hg38 SKCM TCGA-GN-A26D-06A 148 777 Out-of-frame Intra-chr q15 Seq+ 103684 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNS-RAB3IP GNS chr12 64744809 - RAB3IP chr12 69812964 + Exonic hg38 SKCM TCGA-GN-A26D-06A 109 924 In-Frame Intra-chr q14.3 q15 Seq+ 103685 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFC2-AAMDC NDUFC2 chr11 78079579 - AAMDC chr11 77918061 + Exonic hg38 SKCM TCGA-GN-A26D-06A 120 382 CDS-3'UTR Intra-chr q14.1 q14.1 Seq+ 103686 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAP31-HMGB3 BCAP31 chrX 153720872 - HMGB3 chrX 150985595 + Exonic hg38 SKCM TCGA-GN-A26D-06A 16 281 In-Frame Intra-chr q28 q28 Seq+ 103687 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSFM-HMGA2 TSFM chr12 57786291 + HMGA2 chr12 65951383 + Exonic hg38 SKCM TCGA-GN-A26D-06A 35 99 In-Frame Intra-chr q14.1 q14.3 Transcription factor Seq+ 103688 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC9-SLCO1A2 ZDHHC9 chrX 129843259 - SLCO1A2 chr12 21334709 - Exonic hg38 SKCM TCGA-GN-A26D-06A 10 165 5'UTR-5'UTR Inter-chr q26.1 p12.1 Seq+ 103689 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP28-DRD2 USP28 chr11 113841663 - DRD2 chr11 113424682 - Exonic hg38 SKCM TCGA-GN-A26D-06A 15 140 5'UTR-5'UTR Intra-chr q23.2 q23.2 Seq+ 103690 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRIG3-ATP5B LRIG3 chr12 58876445 - ATP5B chr12 56645353 - Exonic hg38 SKCM TCGA-GN-A26D-06A 26 80 Out-of-frame Intra-chr q14.1 Tumor suppressor gene q13.3 Seq+ 103691 ChimerSeq TCGA FAWG TCGA_RNA-Seq YAP1-TTC12 YAP1 chr11 102227581 + TTC12 chr11 113368187 + Exonic hg38 SKCM TCGA-GN-A26D-06A 16 88 CDS-5'UTR Intra-chr q22.1 Tumor suppressor gene q23.2 Seq+ 103692 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBK1-GRIP1 TBK1 chr12 64455957 + GRIP1 chr12 66465422 - Exonic hg38 SKCM TCGA-GN-A26D-06A 22 58 Out-of-frame Intra-chr q14.2 Other:IKK q14.3 Seq+ 103693 ChimerSeq TCGA FAWG TCGA_RNA-Seq GABRA3-SARNP GABRA3 chrX 152224763 - SARNP chr12 55752840 - Exonic hg38 SKCM TCGA-GN-A26D-06A 14 58 CDS-3'UTR Inter-chr q28 q13.2 Seq+ 103694 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK1-PDGFD PAK1 chr11 77473552 - PDGFD chr11 103947724 - Exonic hg38 SKCM TCGA-GN-A26D-06A 19 37 5'UTR-CDS Intra-chr q14.1 STE:STE20 q22.3 Seq+ 103695 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENDOD1-RAB30 ENDOD1 chr11 95090227 + RAB30 chr11 82994122 - Exonic hg38 SKCM TCGA-GN-A26D-06A 16 33 In-Frame Intra-chr q21 q14.1 Seq+ 103696 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK2-BATF2 MARK2 chr11 63839560 + BATF2 chr11 64994549 - Exonic hg38 SKCM TCGA-GN-A26D-06A 9 50 In-Frame Intra-chr q13.1 CAMK:CAMKL q13.1 Tumor suppressor gene Transcription factor Seq+ 103697 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM19A2-RAB3IP FAM19A2 chr12 62207172 - RAB3IP chr12 69812964 + Exonic hg38 SKCM TCGA-GN-A26D-06A 7 48 Out-of-frame Intra-chr q14.1 q15 Seq+ 103698 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HDM2-PPM1H R3HDM2 chr12 57395749 - PPM1H chr12 62737586 - Exonic hg38 SKCM TCGA-GN-A26D-06A 8 30 5'UTR-CDS Intra-chr q13.3 q14.2 Seq+ 103699 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGA2-GABRA3 HMGA2 chr12 65838569 + GABRA3 chrX 152224845 - Exonic hg38 SKCM TCGA-GN-A26D-06A 6 29 Out-of-frame Inter-chr q14.3 Transcription factor q28 Seq+ 103700 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK1-ARHGAP42 PAK1 chr11 77473552 - ARHGAP42 chr11 100795105 + Exonic hg38 SKCM TCGA-GN-A26D-06A 6 28 5'UTR-5'UTR Intra-chr q14.1 STE:STE20 q22.1 Seq+ 103701 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D15-MYF6 TBC1D15 chr12 71873003 + MYF6 chr12 80707855 + Exonic hg38 SKCM TCGA-GN-A26D-06A 5 22 Out-of-frame Intra-chr q21.1 q21.31 Transcription factor Seq+ 103702 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSF1-TRPC6 RSF1 chr11 77764598 - TRPC6 chr11 101504798 - Exonic hg38 SKCM TCGA-GN-A26D-06A 5 19 Out-of-frame Intra-chr q14.1 q22.1 Seq+ 103703 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHMT2-SLC16A7 SHMT2 chr12 57234110 + SLC16A7 chr12 59771219 + Exonic hg38 SKCM TCGA-GN-A26D-06A 5 15 In-Frame Intra-chr q13.3 q14.1 Seq+ 103704 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXNB3-PYM1 PLXNB3 chrX 153765580 + PYM1 chr12 55915555 - Exonic hg38 SKCM TCGA-GN-A26D-06A 4 12 5'UTR-CDS Inter-chr q28 q13.2 103705 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKH-ANO6 ANKH chr5 14741827 - ANO6 chr12 45302014 + Exonic hg38 SKCM TCGA-GN-A26D-06A 2 13 Out-of-frame Inter-chr p15.2 q12 Seq+ 103706 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAND1-PTPRR CAND1 chr12 67282053 + PTPRR chr12 70892977 - Exonic hg38 SKCM TCGA-GN-A26D-06A 2 11 Out-of-frame Intra-chr q14.3 q15 Seq+ 103707 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS4-PGR INTS4 chr11 77955942 - PGR chr11 101091876 - Exonic hg38 SKCM TCGA-GN-A26D-06A 1 8 Out-of-frame Intra-chr q14.1 q22.1 Tumor suppressor gene Transcription factor Seq+ 103708 ChimerSeq TCGA FAWG TCGA_RNA-Seq TESK2-KNCN TESK2 chr1 45457564 - KNCN chr1 46550002 - Exonic hg38 SKCM TCGA-GN-A26D-06A 1 5 Out-of-frame Intra-chr p34.1 TKL:LISK p33 Seq+ 103709 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESRRA-TEX40 ESRRA chr11 64307504 + TEX40 chr11 64303482 + Exonic hg38 SKCM TCGA-GN-A4U3-06A 36 206 Out-of-frame Intra-chr q13.1 Transcription factor 103710 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF40-SLC6A10P RNF40 chr16 30774251 + SLC6A10P chr16 32879325 - Exonic hg38 SKCM TCGA-GN-A4U3-06A 9 17 Out-of-frame Intra-chr p11.2 p11.2 103711 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLD3-EFCAB5 POLD3 chr11 74634979 + EFCAB5 chr17 29929938 + Exonic hg38 SKCM TCGA-GN-A4U3-06A 4 3 Out-of-frame Inter-chr q13.4 q11.2 103712 ChimerSeq TCGA FAWG TCGA_RNA-Seq CABIN1-GSTT2 CABIN1 chr22 24113748 + GSTT2 chr22 23980948 + Exonic hg38 SKCM TCGA-GN-A4U4-06A 9 7 CDS-3'UTR Intra-chr Seq+ 103713 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUMA1-YAP1 NUMA1 chr11 72035902 - YAP1 chr11 102223622 + Exonic hg38 SKCM TCGA-GN-A4U7-06A 7 23 In-Frame Intra-chr q13.4 Oncogene q22.1 Tumor suppressor gene Seq+ 103714 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRB3-CFHR1 ADGRB3 chr6 69018499 + CFHR1 chr1 196830500 + Exonic hg38 SKCM TCGA-GN-A4U9-06A 1 8 In-Frame Inter-chr q12 Oncogene q31.3 103715 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1D-MT4 MYO1D chr17 32605087 - MT4 chr16 56565093 + Exonic hg38 SKCM TCGA-GN-A8LK-06A 22 69 CDS-5'UTR Inter-chr q11.2 q13 Seq+ 103716 ChimerSeq TCGA FAWG TCGA_RNA-Seq STIM1-PNPLA2 STIM1 chr11 3856409 + PNPLA2 chr11 821628 + Exonic hg38 SKCM TCGA-GN-A8LK-06A 6 23 In-Frame Intra-chr p15.4 p15.5 Seq+ 103717 ChimerSeq TCGA FAWG TCGA_RNA-Seq GDPD5-SERPINH1 GDPD5 chr11 75477619 - SERPINH1 chr11 75566316 + Exonic hg38 SKCM TCGA-GN-A8LL-06A 27 71 5'UTR-5'UTR Intra-chr q13.5 q13.5 Seq+ 103718 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERPINH1-MYO7A SERPINH1 chr11 75566971 + MYO7A chr11 77130589 + Exonic hg38 SKCM TCGA-GN-A8LL-06A 7 15 CDS-5'UTR Intra-chr q13.5 q13.5 Seq+ 103719 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANGO2-USP18 TANGO2 chr22 20043443 + USP18 chr22 18176772 + Exonic hg38 SKCM TCGA-GN-A8LL-06A 6 4 Out-of-frame Intra-chr q11.21 q11.21 103720 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDLRAD3-VWA5B2 LDLRAD3 chr11 36098461 + VWA5B2 chr3 184234631 + Exonic hg38 SKCM TCGA-GN-A8LL-06A 3 12 In-Frame Inter-chr p13 q27.1 Seq+ 103721 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIOBP-RAB6A TRIOBP chr22 37769375 + RAB6A chr11 73720899 - Exonic hg38 SKCM TCGA-GN-A8LL-06A 3 10 In-Frame Inter-chr q13.1 q13.4 Seq+ 103722 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF429-C2CD3 ZNF429 chr19 21506080 + C2CD3 chr11 74098255 - Exonic hg38 SKCM TCGA-GN-A8LL-06A 1 5 Out-of-frame Inter-chr p12 Transcription factor q13.4 Seq+ 103723 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCNM1-SSBP3 SCNM1 chr1 151166203 + SSBP3 chr1 54251860 - Exonic hg38 SKCM TCGA-GN-A8LL-06A 1 1 In-Frame Intra-chr q21.3 p32.3 Seq+ 103724 ChimerSeq TCGA FAWG TCGA_RNA-Seq CABIN1-POLR2F CABIN1 chr22 24134415 + POLR2F chr22 37956773 + Exonic hg38 SKCM TCGA-GN-A8LN-01A 33 174 Out-of-frame Intra-chr q13.1 Seq+ 103725 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK3-ADM2 SHANK3 chr22 50722437 + ADM2 chr22 50486270 + Exonic hg38 SKCM TCGA-GN-A8LN-01A 17 46 3'UTR-3'UTR Intra-chr q13.33 103726 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGSM3-DEFB126 SGSM3 chr22 40370688 + DEFB126 chr20 145415 + Exonic hg38 SKCM TCGA-GN-A8LN-01A 9 39 5'UTR-CDS Inter-chr q13.1 p13 Seq+ 103727 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE3B-PLCXD3 PDE3B chr11 14867758 + PLCXD3 chr5 41313770 - Exonic hg38 SKCM TCGA-GN-A8LN-01A 4 15 Out-of-frame Inter-chr p15.2 p13.1 Seq+ 103728 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARVB-RRP7BP PARVB chr22 44136518 + RRP7BP chr22 42556674 - Exonic hg38 SKCM TCGA-GN-A8LN-01A 4 9 CDS-3'UTR Intra-chr q13.31 q13.2 103729 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKL1-SDCBP2 MKL1 chr22 40636478 - SDCBP2 chr20 1320435 - Exonic hg38 SKCM TCGA-GN-A8LN-01A 3 3 Out-of-frame Inter-chr q13.2 p13 103730 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK3-MIOX SHANK3 chr22 50722437 + MIOX chr22 50487385 + Exonic hg38 SKCM TCGA-GN-A8LN-01A 1 7 3'UTR-CDS Intra-chr q13.33 Seq+ 103731 ChimerSeq TCGA FAWG TCGA_RNA-Seq UQCC1-RBM39 UQCC1 chr20 35381918 - RBM39 chr20 35739017 - Exonic hg38 SKCM TCGA-LH-A9QB-06A 1 5 In-Frame Intra-chr q11.22 q11.22 103732 ChimerSeq TCGA FAWG TCGA_RNA-Seq STXBP5-SAMD5 STXBP5 chr6 147316407 + SAMD5 chr6 147564394 + Exonic hg38 SKCM TCGA-OD-A75X-06A 35 236 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 103733 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLEU2-CAB39L DLEU2 chr13 50125302 - CAB39L chr13 49344238 - Exonic hg38 SKCM TCGA-OD-A75X-06A 10 35 3'UTR-CDS Intra-chr q14.2 Tumor suppressor gene q14.2 Seq+ 103734 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNRF3-MYH9 ZNRF3 chr22 28884066 + MYH9 chr22 36297014 - Exonic hg38 SKCM TCGA-OD-A75X-06A 4 5 Out-of-frame Intra-chr q12.1 q12.3 Oncogene Tumor suppressor gene Seq+ 103735 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAR1A-HNRNPF SAR1A chr10 70170413 - HNRNPF chr10 43396590 - Exonic hg38 SKCM TCGA-OD-A75X-06A 1 3 5'UTR-5'UTR Intra-chr q22.1 q11.21 103736 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANAPC5-ADAM15 ANAPC5 chr12 121345839 - ADAM15 chr1 155062245 + Exonic hg38 SKCM TCGA-QB-AA9O-06A 71 317 In-Frame Inter-chr q24.31 q21.3 Seq+ 103737 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID4B-IGFN1 ARID4B chr1 235327769 - IGFN1 chr1 201225824 + Exonic hg38 SKCM TCGA-QB-AA9O-06A 6 48 5'UTR-CDS Intra-chr q42.3 q32.1 Seq+ 103738 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHC1-ANAPC5 SHC1 chr1 154974248 - ANAPC5 chr12 121342069 - Exonic hg38 SKCM TCGA-QB-AA9O-06A 4 22 5'UTR-CDS Inter-chr q21.3 q24.31 Seq+ 103739 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOCAD-IFT74 FOCAD chr9 20823115 + IFT74 chr9 27009020 + Exonic hg38 SKCM TCGA-QB-AA9O-06A 4 4 Out-of-frame Intra-chr p21.3 p21.2 Seq+ 103740 ChimerSeq TCGA FAWG TCGA_RNA-Seq IPO9-S100A13 IPO9 chr1 201829372 + S100A13 chr1 153627598 - Exonic hg38 SKCM TCGA-QB-AA9O-06A 2 10 CDS-5'UTR Intra-chr q32.1 q21.3 Seq+ 103741 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A1-PFDN2 SLC39A1 chr1 153967386 - PFDN2 chr1 161102375 - Exonic hg38 SKCM TCGA-QB-AA9O-06A 2 10 5'UTR-CDS Intra-chr q21.3 Tumor suppressor gene q23.3 Seq+ 103742 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGN1-UBE2G2 HMGN1 chr21 39345146 - UBE2G2 chr21 44777417 - Exonic hg38 SKCM TCGA-RP-A693-06A 4 17 Out-of-frame Intra-chr q22.2 q22.3 Seq+ 103743 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2G2-SON UBE2G2 chr21 44787920 - SON chr21 33546213 + Exonic hg38 SKCM TCGA-RP-A693-06A 1 4 In-Frame Intra-chr q22.3 q22.11 Transcription factor Seq+ 103744 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF268-TRPM3 ZNF268 chr12 133182030 + TRPM3 chr9 70640660 - Exonic hg38 SKCM TCGA-RP-A694-06A 1 19 Out-of-frame Inter-chr q24.33 Transcription factor q21.13 103745 ChimerSeq TCGA FAWG TCGA_RNA-Seq MLLT10-SLC16A1 MLLT10 chr10 21534804 + SLC16A1 chr1 112929352 - Exonic hg38 SKCM TCGA-RP-A695-06A 6 45 5'UTR-5'UTR Inter-chr p12.31 Oncogene Seq+ 103746 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1A-PRPF40B ARID1A chr1 26732792 + PRPF40B chr12 49583562 + Exonic hg38 SKCM TCGA-RP-A695-06A 6 44 CDS-5'UTR Inter-chr p36.11 Oncogene Tumor suppressor gene q13.12 Seq+ 103747 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPAP1-SYTL1 RPAP1 chr15 41544219 - SYTL1 chr1 27347421 + Exonic hg38 SKCM TCGA-RP-A695-06A 12 19 5'UTR-CDS Inter-chr q15.1 p36.11 Seq+ 103748 ChimerSeq TCGA FAWG TCGA_RNA-Seq APBA2-SOAT2 APBA2 chr15 28995806 + SOAT2 chr12 53118890 + Exonic hg38 SKCM TCGA-RP-A695-06A 5 43 3'UTR-CDS Inter-chr q13.13 Seq+ 103749 ChimerSeq TCGA FAWG TCGA_RNA-Seq HERC2-IGFBP6 HERC2 chr15 28142238 - IGFBP6 chr12 53100712 + Exonic hg38 SKCM TCGA-RP-A695-06A 2 5 5'UTR-CDS Inter-chr q13.13 Seq+ 103750 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENAH-SCCPDH ENAH chr1 225652686 - SCCPDH chr1 246758226 + Exonic hg38 SKCM TCGA-W3-A824-06A 10 63 Out-of-frame Intra-chr q42.12 q44 Seq+ 103751 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD7-NPY5R SETD7 chr4 139546920 - NPY5R chr4 163345714 + Exonic hg38 SKCM TCGA-W3-A825-06A 25 60 CDS-5'UTR Intra-chr q31.1 q32.2 Seq+ 103752 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R10-MUS81 PPP1R10 chr6 30616478 - MUS81 chr11 65860675 + Exonic hg38 SKCM TCGA-W3-A825-06A 22 53 5'UTR-5'UTR Inter-chr q13.1 Tumor suppressor gene Seq+ 103753 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAPGEF2-PRDM5 RAPGEF2 chr4 159193256 + PRDM5 chr4 120685025 - Exonic hg38 SKCM TCGA-W3-A825-06A 9 27 CDS-3'UTR Intra-chr q32.1 q27 Tumor suppressor gene Transcription factor 103754 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPF2-PPP1R10 DPF2 chr11 65333918 + PPP1R10 chr6 30609955 - Exonic hg38 SKCM TCGA-W3-A825-06A 7 26 CDS-5'UTR Inter-chr q13.1 Seq+ 103755 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOLIM4-MECOM GOLIM4 chr3 168024526 - MECOM chr3 169143832 - Exonic hg38 SKCM TCGA-W3-A828-06A 5 46 In-Frame Intra-chr q26.2 q26.2 Transcription factor Seq+ 103756 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAT-TRIM44 CAT chr11 34461389 + TRIM44 chr11 35806358 + Exonic hg38 SKCM TCGA-W3-A828-06A 6 33 Out-of-frame Intra-chr p13 Tumor suppressor gene p13 Seq+ 103757 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF20-CENPM TCF20 chr22 42209651 - CENPM chr22 41946496 - Exonic hg38 SKCM TCGA-W3-A828-06A 5 17 5'UTR-CDS Intra-chr Transcription factor q13.2 Seq+ 103758 ChimerSeq TCGA FAWG TCGA_RNA-Seq MECOM-GOLIM4 MECOM chr3 169381187 - GOLIM4 chr3 168010823 - Exonic hg38 SKCM TCGA-W3-A828-06A 1 3 In-Frame Intra-chr q26.2 Transcription factor q26.2 103759 ChimerSeq TCGA FAWG TCGA_RNA-Seq ICMT-NPHP4 ICMT chr1 6234886 - NPHP4 chr1 5969259 - Exonic hg38 SKCM TCGA-W3-AA1O-06A 3 48 Out-of-frame Intra-chr p36.31 p36.31 103760 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGXB4-MGMT HMGXB4 chr22 35257557 + MGMT chr10 129707895 + Exonic hg38 SKCM TCGA-W3-AA1R-06A 134 204 5'UTR-CDS Inter-chr q12.3 q26.3 Seq+ 103761 ChimerSeq TCGA FAWG TCGA_RNA-Seq PELI2-GPHN PELI2 chr14 56178464 + GPHN chr14 67023633 + Exonic hg38 SKCM TCGA-W3-AA1R-06A 27 87 In-Frame Intra-chr q22.3 q23.3 Seq+ 103762 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMTM8-RPN1 CMTM8 chr3 32239119 + RPN1 chr3 128626832 - Exonic hg38 SKCM TCGA-W3-AA1R-06A 20 50 Out-of-frame Intra-chr p22.3 q21.3 Seq+ 103763 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPN1-SLC22A13 RPN1 chr3 128629951 - SLC22A13 chr3 38265994 + Exonic hg38 SKCM TCGA-W3-AA1R-06A 3 6 Out-of-frame Intra-chr q21.3 p22.2 Seq+ 103764 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV6-ITLN1 ETV6 chr12 11650160 + ITLN1 chr1 160884883 - Exonic hg38 SKCM TCGA-W3-AA1V-06B 48 168 CDS-5'UTR Inter-chr p13.2 Tumor suppressor gene Transcription factor q23.3 Seq+ 103765 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A16-DRGX SLC25A16 chr10 68488467 - DRGX chr10 49366381 - Exonic hg38 SKCM TCGA-W3-AA1V-06B 12 24 Out-of-frame Intra-chr q21.3 q11.23 Transcription factor Seq+ 103766 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST5-DENND5A ST5 chr11 8831556 - DENND5A chr11 9150209 - Exonic hg38 SKCM TCGA-W3-AA1V-06B 7 38 5'UTR-CDS Intra-chr p15.4 Tumor suppressor gene p15.4 Seq+ 103767 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARCH3-OPCML 2019_ 3_ 3_ chr5 127030350 - OPCML chr11 132943010 - Exonic hg38 SKCM TCGA-W3-AA1V-06B 1 20 Out-of-frame Inter-chr q23.2 q25 Tumor suppressor gene Seq+ 103768 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNMBP-CPN1 DNMBP chr10 99955214 - CPN1 chr10 100057152 - Exonic hg38 SKCM TCGA-W3-AA1W-06A 2 17 CDS-3'UTR Intra-chr q24.2 q24.2 Seq+ 103769 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXNC1-CRADD PLXNC1 chr12 94304051 + CRADD chr12 93678769 + Exonic hg38 SKCM TCGA-WE-A8K1-06A 5 77 5'UTR-5'UTR Intra-chr q22 Tumor suppressor gene q22 Seq+ 103770 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR76-IDH3A WDR76 chr15 43828366 + IDH3A chr15 78168922 + Exonic hg38 SKCM TCGA-WE-A8K1-06A 3 77 In-Frame Intra-chr q15.3 q25.1 Seq+ 103771 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL48-SUGP2 MRPL48 chr11 73808350 + SUGP2 chr19 19010342 - Exonic hg38 SKCM TCGA-WE-A8K1-06A 5 15 Out-of-frame Inter-chr q13.4 p13.11 Seq+ 103772 ChimerSeq TCGA FAWG TCGA_RNA-Seq BST2-SLC27A1 BST2 chr19 17403680 - SLC27A1 chr19 17486563 + Exonic hg38 SKCM TCGA-WE-A8K1-06A 2 25 3'UTR-CDS Intra-chr p13.11 p13.11 Seq+ 103773 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLE1-SLC27A4 GLE1 chr9 128509097 + SLC27A4 chr9 128355398 + Exonic hg38 SKCM TCGA-WE-A8K1-06A 5 13 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 103774 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCHP-MYO1H TCHP chr12 109900426 + MYO1H chr12 109388683 + Exonic hg38 SKCM TCGA-WE-A8K1-06A 2 5 5'UTR-5'UTR Intra-chr q24.11 Tumor suppressor gene q24.11 Seq+ 103775 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM2-C19orf66 DNM2 chr19 10718403 + C19orf66 chr19 10086929 + Exonic hg38 SKCM TCGA-WE-A8K1-06A 1 5 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 103776 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB5B-ALK RAB5B chr12 55974139 + ALK chr2 29227025 - Exonic hg38 SKCM TCGA-WE-A8K4-01A 125 40 5'UTR-5'UTR Inter-chr q13.2 p23.1 TK:ALK Oncogene Seq+ 103777 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK2-ALK CDK2 chr12 55971247 + ALK chr2 29225565 - Exonic hg38 SKCM TCGA-WE-A8K4-01A 2 39 Out-of-frame Inter-chr q13.2 CMGC:CDK Tumor suppressor gene p23.1 TK:ALK Oncogene Seq+ 103778 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC5L-MLIP CDC5L chr6 44429910 + MLIP chr6 54257308 + Exonic hg38 SKCM TCGA-WE-A8K4-01A 5 8 3'UTR-CDS Intra-chr p21.1 Transcription factor p12.1 Seq+ 103779 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOPEY2-CBR3 DOPEY2 chr21 36214556 + CBR3 chr21 36137825 + Exonic hg38 SKCM TCGA-WE-A8K4-01A 2 15 Out-of-frame Intra-chr q22.12 q22.12 Seq+ 103780 ChimerSeq TCGA FAWG TCGA_RNA-Seq IPO7-CTR9 IPO7 chr11 9384847 + CTR9 chr11 10752672 + Exonic hg38 SKCM TCGA-WE-A8K5-06A 6 18 In-Frame Intra-chr p15.4 p15.4 Seq+ 103781 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANSL1-VAT1 KANSL1 chr17 46169531 - VAT1 chr17 43016548 - Exonic hg38 SKCM TCGA-WE-A8K5-06A 4 15 5'UTR-CDS Intra-chr q21.31 Seq+ 103782 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF212-PDE3B ZNF212 chr7 149250807 + PDE3B chr11 14818183 + Exonic hg38 SKCM TCGA-WE-A8ZM-06A 21 67 In-Frame Inter-chr q36.1 Transcription factor p15.2 Seq+ 103783 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE3B-ZNF212 PDE3B chr11 14835095 + ZNF212 chr7 149250681 + Exonic hg38 SKCM TCGA-WE-A8ZM-06A 5 87 Out-of-frame Inter-chr p15.2 q36.1 Transcription factor Seq+ 103784 ChimerSeq TCGA FAWG TCGA_RNA-Seq LUC7L2-IGSF22 LUC7L2 chr7 139407350 + IGSF22 chr11 18717000 - Exonic hg38 SKCM TCGA-WE-A8ZM-06A 3 30 Out-of-frame Inter-chr q34 p15.1 Seq+ 103785 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPEB1-CRTC3 CPEB1 chr15 82647137 - CRTC3 chr15 90604385 + Exonic hg38 SKCM TCGA-WE-A8ZM-06A 3 26 5'UTR-CDS Intra-chr q25.2 Transcription factor q26.1 Seq+ 103786 ChimerSeq TCGA FAWG TCGA_RNA-Seq UMAD1-GCK UMAD1 chr7 7640821 + GCK chr7 44153463 - Exonic hg38 SKCM TCGA-WE-A8ZM-06A 3 16 5'UTR-CDS Intra-chr p21.3 p13 STE:STE20 103787 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNC45A-RALGAPB UNC45A chr15 90950615 + RALGAPB chr20 38551071 + Exonic hg38 SKCM TCGA-WE-A8ZM-06A 4 9 Out-of-frame Inter-chr q26.1 q11.23 Seq+ 103788 ChimerSeq TCGA FAWG TCGA_RNA-Seq JAK2-DOCK8 JAK2 chr9 5055788 + DOCK8 chr9 286461 + Exonic hg38 SKCM TCGA-WE-A8ZN-06A 3 14 In-Frame Intra-chr p24.1 TK:JakA Oncogene p24.3 Seq+ 103789 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOSL1-SYT7 FOSL1 chr11 65900241 - SYT7 chr11 61528185 - Exonic hg38 SKCM TCGA-WE-A8ZN-06A 2 1 In-Frame Intra-chr q13.1 Transcription factor q12.2 103790 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4K4-IL1R1 MAP4K4 chr2 101877146 + IL1R1 chr2 102153941 + Exonic hg38 SKCM TCGA-WE-A8ZO-06A 5 5 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 103791 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFP90-CBFB ZFP90 chr16 68539825 + CBFB chr16 67082213 + Exonic hg38 SKCM TCGA-WE-A8ZQ-06A 2 10 In-Frame Intra-chr q22.1 Transcription factor q22.1 Seq+ 103792 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAV2-ARL14EP NAV2 chr11 19713962 + ARL14EP chr11 30330886 + Exonic hg38 SKCM TCGA-WE-A8ZR-06A 18 183 CDS-5'UTR Intra-chr p15.1 p14.1 Seq+ 103793 ChimerSeq TCGA FAWG TCGA_RNA-Seq GBE1-FAM19A1 GBE1 chr3 81593908 - FAM19A1 chr3 68417280 + Exonic hg38 SKCM TCGA-WE-A8ZR-06A 4 18 Out-of-frame Intra-chr p12.2 p14.1 Seq+ 103794 ChimerSeq TCGA FAWG TCGA_RNA-Seq GUCY1B2-ADSL GUCY1B2 chr13 51004253 - ADSL chr22 40353073 + Exonic hg38 SKCM TCGA-WE-A8ZR-06A 2 19 3'UTR-CDS Inter-chr q14.3 q13.1 Seq+ 103795 ChimerSeq TCGA FAWG TCGA_RNA-Seq UFD1L-GUCY1B2 UFD1L chr22 19475068 - GUCY1B2 chr13 51048314 - Exonic hg38 SKCM TCGA-WE-A8ZR-06A 4 9 Out-of-frame Inter-chr q14.3 Seq+ 103796 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD4B-ABCA5 FRMD4B chr3 69287752 - ABCA5 chr17 69256283 - Exonic hg38 SKCM TCGA-WE-A8ZR-06A 2 15 Out-of-frame Inter-chr p14.1 q24.3 Seq+ 103797 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP6V1G1-COL5A1 ATP6V1G1 chr9 114587920 + COL5A1 chr9 134763693 + Exonic hg38 SKCM TCGA-WE-A8ZR-06A 3 5 Out-of-frame Intra-chr q32 q34.3 Seq+ 103798 ChimerSeq TCGA FAWG TCGA_RNA-Seq STOM-RC3H2 STOM chr9 121370127 - RC3H2 chr9 122893026 - Exonic hg38 SKCM TCGA-WE-A8ZR-06A 2 5 Out-of-frame Intra-chr q33.2 q33.2 103799 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCA-BAIAP2 PRKCA chr17 66496283 + BAIAP2 chr17 81053668 + Exonic hg38 SKCM TCGA-WE-A8ZR-06A 1 6 In-Frame Intra-chr q24.2 q25.3 103800 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAP1-MLLT3 BAP1 chr3 52409714 - MLLT3 chr9 20342650 - Exonic hg38 SKCM TCGA-WE-A8ZT-06A 49 313 CDS-3'UTR Inter-chr p21.1 Oncogene Tumor suppressor gene p21.3 103801 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKAL1-MICB CDKAL1 chr6 20548705 + MICB chr6 31505617 + Exonic hg38 SKCM TCGA-WE-A8ZT-06A 24 47 CDS-3'UTR Intra-chr p22.3 103802 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBALD2-FMN1 UBALD2 chr17 76265969 + FMN1 chr15 32969477 - Exonic hg38 SKCM TCGA-WE-A8ZT-06A 11 35 CDS-5'UTR Inter-chr q25.1 103803 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOCAD-SMIM4 FOCAD chr9 20720534 + SMIM4 chr3 52579018 + Exonic hg38 SKCM TCGA-WE-A8ZT-06A 6 9 CDS-3'UTR Inter-chr p21.3 p21.1 103804 ChimerSeq TCGA FAWG TCGA_RNA-Seq FMN1-UBALD2 FMN1 chr15 32926174 - UBALD2 chr17 76270194 + Exonic hg38 SKCM TCGA-WE-A8ZT-06A 2 8 5'UTR-CDS Inter-chr q25.1 103805 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD8-NDRG2 CHD8 chr14 21456032 - NDRG2 chr14 21023321 - Exonic hg38 SKCM TCGA-WE-A8ZX-06A 4 14 5'UTR-5'UTR Intra-chr q11.2 q11.2 Tumor suppressor gene Seq+ 103806 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC2A13-FAM186A SLC2A13 chr12 40105253 - FAM186A chr12 50334103 - Exonic hg38 SKCM TCGA-WE-A8ZX-06A 3 9 Out-of-frame Intra-chr q12 q13.12 Seq+ 103807 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD8-MIR6717 CHD8 chr14 21456032 - MIR6717 chr14 21023321 - Exonic hg38 SKCM TCGA-WE-A8ZX-06A 4 2 Out-of-frame Intra-chr q11.2 q11.2 103808 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIPOL1-SCFD1 MIPOL1 chr14 37270525 + SCFD1 chr14 30649528 + Exonic hg38 SKCM TCGA-WE-A8ZX-06A 3 5 In-Frame Intra-chr q13.3 q12 Seq+ 103809 ChimerSeq TCGA FAWG TCGA_RNA-Seq MITF-MORC1 MITF chr3 69879383 + MORC1 chr3 109069757 - Exonic hg38 SKCM TCGA-WE-A8ZX-06A 2 5 Out-of-frame Intra-chr p13 Oncogene Transcription factor q13.13 Seq+ 103810 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUMB-TSHR NUMB chr14 73355626 - TSHR chr14 81062148 + Exonic hg38 SKCM TCGA-WE-A8ZX-06A 1 5 Out-of-frame Intra-chr q24.3 Tumor suppressor gene q31.1 Oncogene Seq+ 103811 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2E1-RAB14 UBE2E1 chr3 23811510 + RAB14 chr9 121193419 - Exonic hg38 SKCM TCGA-WE-AA9Y-06A 1 10 CDS-5'UTR Inter-chr p24.2 q33.2 Seq+ 103812 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYP7B1-SULF1 CYP7B1 chr8 64798466 - SULF1 chr8 69563539 + Exonic hg38 SKCM TCGA-WE-AAA3-06A 9 37 CDS-5'UTR Intra-chr q12.3 q13.2 Seq+ 103813 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC22B-WARS2 SEC22B chr1 120176307 - WARS2 chr1 119076607 - Exonic hg38 SKCM TCGA-WE-AAA3-06A 11 17 In-Frame Intra-chr p12 p12 103814 ChimerSeq TCGA FAWG TCGA_RNA-Seq NKAIN3-TOX NKAIN3 chr8 62249127 + TOX chr8 58808269 - Exonic hg38 SKCM TCGA-WE-AAA3-06A 2 12 In-Frame Intra-chr q12.3 q12.1 Seq+ 103815 ChimerSeq TCGA FAWG TCGA_RNA-Seq LACTB2-CYP7B1 LACTB2 chr8 70657756 - CYP7B1 chr8 64624539 - Exonic hg38 SKCM TCGA-WE-AAA3-06A 2 8 In-Frame Intra-chr q13.3 q12.3 Seq+ 103816 ChimerSeq TCGA FAWG TCGA_RNA-Seq HPS4-UBE2L3 HPS4 chr22 26463917 - UBE2L3 chr22 21592861 + Exonic hg38 SKCM TCGA-XV-A9W2-01A 23 96 In-Frame Intra-chr q12.1 q11.21 Seq+ 103817 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKL1-CSNK1E MKL1 chr22 40533590 - CSNK1E chr22 38314169 - Exonic hg38 SKCM TCGA-XV-A9W2-01A 1 16 Out-of-frame Intra-chr q13.2 q13.1 Seq+ 103818 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEI1-MKL1 MEI1 chr22 41763321 + MKL1 chr22 40463286 - Exonic hg38 SKCM TCGA-XV-A9W2-01A 1 11 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 103819 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST13-MEI1 ST13 chr22 40856431 - MEI1 chr22 41758365 + Exonic hg38 SKCM TCGA-XV-A9W2-01A 1 6 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 Seq+ 103820 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2CD3-PC C2CD3 chr11 74161399 - PC chr11 66872159 - Exonic hg38 SKCM TCGA-XV-A9W5-01A 2 11 CDS-5'UTR Intra-chr q13.4 q13.2 Seq+ 103821 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCMTD2-MYT1 PCMTD2 chr20 64260272 + MYT1 chr20 64218911 + Exonic hg38 SKCM TCGA-XV-AAZV-01A 2 10 3'UTR-3'UTR Intra-chr Other:WEE Transcription factor Seq+ 103822 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF34-WDFY2 RNF34 chr12 121400218 + WDFY2 chr13 51660596 + Exonic hg38 SKCM TCGA-XV-AAZV-01A 2 4 Out-of-frame Inter-chr q24.31 q14.3 Seq+ 103823 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX17-POLR3H DDX17 chr22 38498086 - POLR3H chr22 41540428 - Exonic hg38 SKCM TCGA-XV-AAZY-01A 587 1572 Out-of-frame Intra-chr q13.1 q13.2 Seq+ 103824 ChimerSeq TCGA FAWG TCGA_RNA-Seq XRCC6-ARSB XRCC6 chr22 41628230 + ARSB chr5 78969192 - Exonic hg38 SKCM TCGA-XV-AAZY-01A 41 109 In-Frame Inter-chr q13.2 q14.1 Seq+ 103825 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAI1-SIMC1 RAI1 chr17 17724159 + SIMC1 chr5 176336720 + Exonic hg38 SKCM TCGA-XV-AAZY-01A 35 118 5'UTR-5'UTR Inter-chr p11.2 q35.2 Seq+ 103826 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCHO2-SLC25A17 FCHO2 chr5 72956129 + SLC25A17 chr22 40779125 - Exonic hg38 SKCM TCGA-XV-AAZY-01A 9 23 Out-of-frame Inter-chr q13.2 q13.2 Seq+ 103827 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H7B-MICALL1 ZC3H7B chr22 41327364 + MICALL1 chr22 37911952 + Exonic hg38 SKCM TCGA-XV-AAZY-01A 2 7 Out-of-frame Intra-chr q13.2 q13.1 Seq+ 103828 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACO2-RASGEF1C ACO2 chr22 41469182 + RASGEF1C chr5 180138058 - Exonic hg38 SKCM TCGA-XV-AAZY-01A 1 8 5'UTR-5'UTR Inter-chr q13.2 q35.3 Seq+ 103829 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAH14-ARF1 DNAH14 chr1 224929835 + ARF1 chr1 228097078 + Exonic hg38 SKCM TCGA-YD-A89C-06A 53 398 5'UTR-5'UTR Intra-chr q42.12 q42.13 Tumor suppressor gene Seq+ 103830 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC22A23-LRRC49 SLC22A23 chr6 3410188 - LRRC49 chr15 70904552 + Exonic hg38 SKCM TCGA-YD-A89C-06A 36 124 Out-of-frame Inter-chr p25.2 q23 Seq+ 103831 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP153-MESP1 NUP153 chr6 17706277 - MESP1 chr15 89750227 - Exonic hg38 SKCM TCGA-YD-A89C-06A 19 109 In-Frame Inter-chr p22.3 q26.1 Transcription factor Seq+ 103832 ChimerSeq TCGA FAWG TCGA_RNA-Seq OBSCN-KCNK2 OBSCN chr1 228337383 + KCNK2 chr1 215194953 + Exonic hg38 SKCM TCGA-YD-A89C-06A 13 92 Out-of-frame Intra-chr q42.13 q41 Seq+ 103833 ChimerSeq TCGA FAWG TCGA_RNA-Seq CORO2B-SLC22A23 CORO2B chr15 68579277 + SLC22A23 chr6 3415855 - Exonic hg38 SKCM TCGA-YD-A89C-06A 7 23 In-Frame Inter-chr q23 p25.2 Seq+ 103834 ChimerSeq TCGA FAWG TCGA_RNA-Seq OTUD7B-HIST2H2BF OTUD7B chr1 149977426 - HIST2H2BF chr1 149783260 - Exonic hg38 SKCM TCGA-YD-A89C-06A 6 18 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 103835 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD9-CHSY1 BTBD9 chr6 38577600 - CHSY1 chr15 101178980 - Exonic hg38 SKCM TCGA-YD-A89C-06A 1 9 Out-of-frame Inter-chr p21.2 q26.3 103836 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHSY1-BTBD9 CHSY1 chr15 101235082 - BTBD9 chr6 38580437 - Exonic hg38 SKCM TCGA-YD-A89C-06A 1 7 Out-of-frame Inter-chr q26.3 p21.2 103837 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF691-MAST2 ZNF691 chr1 42846657 + MAST2 chr1 45959386 + Exonic hg38 SKCM TCGA-YD-A9TA-06A 5 7 5'UTR-CDS Intra-chr p34.2 Transcription factor p34.1 AGC:MAST Seq+ 103838 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK1-MAP1B ROCK1 chr18 20966917 - MAP1B chr5 72183743 + Exonic hg38 SKCM TCGA-YD-A9TA-06A 2 14 In-Frame Inter-chr q11.1 AGC:DMPK q13.2 Seq+ 103839 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPIH-CCDC30 PPIH chr1 42667440 + CCDC30 chr1 42581360 + Exonic hg38 SKCM TCGA-YD-A9TA-06A 2 10 3'UTR-CDS Intra-chr p34.2 p34.2 Seq+ 103840 ChimerSeq TCGA FAWG TCGA_RNA-Seq FZD6-SDCCAG8 FZD6 chr8 103330065 + SDCCAG8 chr1 243270105 + Exonic hg38 SKCM TCGA-YD-A9TA-06A 1 8 CDS-3'UTR Inter-chr q22.3 Seq+ 103841 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC30-ERMAP CCDC30 chr1 42589483 + ERMAP chr1 42840033 + Exonic hg38 SKCM TCGA-YD-A9TA-06A 1 3 Out-of-frame Intra-chr p34.2 p34.2 103842 ChimerSeq TCGA FAWG TCGA_RNA-Seq NLGN1-FNDC3B NLGN1 chr3 173435078 + FNDC3B chr3 172362633 + Exonic hg38 SKCM TCGA-YD-A9TA-06A 1 3 5'UTR-CDS Intra-chr q26.31 q26.31 103843 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSE1-C16orf74 GSE1 chr16 85648751 + C16orf74 chr16 85690777 - Exonic hg38 SKCM TCGA-YG-AA3O-06A 125 464 CDS-3'UTR Intra-chr q24.1 q24.1 Seq+ 103844 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPG7-GSE1 SPG7 chr16 89532636 + GSE1 chr16 85648552 + Exonic hg38 SKCM TCGA-YG-AA3O-06A 35 474 In-Frame Intra-chr q24.3 q24.1 Seq+ 103845 ChimerSeq TCGA FAWG TCGA_RNA-Seq JAZF1-CREB5 JAZF1 chr7 28180463 - CREB5 chr7 28570365 + Exonic hg38 SKCM TCGA-YG-AA3O-06A 37 89 Out-of-frame Intra-chr p15.1 Transcription factor p15.1 Transcription factor Seq+ 103846 ChimerSeq TCGA FAWG TCGA_RNA-Seq TERF2IP-CMTM1 TERF2IP chr16 75648552 + CMTM1 chr16 66577104 + Exonic hg38 SKCM TCGA-YG-AA3O-06A 26 116 Out-of-frame Intra-chr q23.1 q21 Seq+ 103847 ChimerSeq TCGA FAWG TCGA_RNA-Seq TERF2IP-CKLF TERF2IP chr16 75648552 + CKLF chr16 66565886 + Exonic hg38 SKCM TCGA-YG-AA3O-06A 12 99 Out-of-frame Intra-chr q23.1 q21 Tumor suppressor gene Seq+ 103848 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAFAH1B1-ABR PAFAH1B1 chr17 2594006 + ABR chr17 1058867 - Exonic hg38 SKCM TCGA-YG-AA3O-06A 29 25 5'UTR-5'UTR Intra-chr p13.3 Tumor suppressor gene p13.3 Seq+ 103849 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLIP2-GTF2I CLIP2 chr7 74380863 + GTF2I chr7 74689124 + Exonic hg38 SKCM TCGA-YG-AA3O-06A 2 27 CDS-5'UTR Intra-chr q11.23 q11.23 Transcription factor 103850 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREB5-JAZF1 CREB5 chr7 28507737 + JAZF1 chr7 27991981 - Exonic hg38 SKCM TCGA-YG-AA3O-06A 2 3 Out-of-frame Intra-chr p15.1 Transcription factor p15.1 Transcription factor Seq+ 103851 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2V1-PAAF1 UBE2V1 chr20 50096672 - PAAF1 chr11 73899146 + Exonic hg38 SKCM TCGA-YG-AA3P-06A 15 121 In-Frame Inter-chr q13.13 q13.4 Seq+ 103852 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTTN-PPP6R3 CTTN chr11 70425401 + PPP6R3 chr11 68583043 + Exonic hg38 SKCM TCGA-YG-AA3P-06A 17 98 Out-of-frame Intra-chr q13.3 q13.2 Seq+ 103853 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAB2-ELMO2 GAB2 chr11 78417646 - ELMO2 chr20 46387419 - Exonic hg38 SKCM TCGA-YG-AA3P-06A 16 74 Out-of-frame Inter-chr q14.1 q13.12 103854 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6R3-ACER3 PPP6R3 chr11 68537891 + ACER3 chr11 76976289 + Exonic hg38 SKCM TCGA-YG-AA3P-06A 13 55 Out-of-frame Intra-chr q13.2 q13.5 Seq+ 103855 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL7L1-UBR2 RPL7L1 chr6 42880966 + UBR2 chr6 42683055 + Exonic hg38 SKCM TCGA-YG-AA3P-06A 8 68 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 103856 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSF1-NARS2 RSF1 chr11 77820528 - NARS2 chr11 78443758 - Exonic hg38 SKCM TCGA-YG-AA3P-06A 13 43 Out-of-frame Intra-chr q14.1 q14.1 Seq+ 103857 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM104A-ACLY FAM104A chr17 73227165 - ACLY chr17 41901813 - Exonic hg38 SKCM TCGA-YG-AA3P-06A 11 18 In-Frame Intra-chr q25.1 q21.2 Seq+ 103858 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCND1-ANO1 CCND1 chr11 69643991 + ANO1 chr11 70078542 + Exonic hg38 SKCM TCGA-YG-AA3P-06A 10 8 CDS-5'UTR Intra-chr q13.3 Oncogene q13.3 Seq+ 103859 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP35-CHRDL2 USP35 chr11 78200808 + CHRDL2 chr11 74718832 - Exonic hg38 SKCM TCGA-YG-AA3P-06A 3 18 Out-of-frame Intra-chr q14.1 q13.4 Seq+ 103860 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAB2-PTPRT GAB2 chr11 78417646 - PTPRT chr20 42199388 - Exonic hg38 SKCM TCGA-YG-AA3P-06A 5 9 Out-of-frame Inter-chr q14.1 q13.11 Oncogene Tumor suppressor gene Seq+ 103861 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL48-NARS2 MRPL48 chr11 73825796 + NARS2 chr11 78528936 - Exonic hg38 SKCM TCGA-YG-AA3P-06A 5 7 In-Frame Intra-chr q13.4 q14.1 Seq+ 103862 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP6V0A1-STAT5B ATP6V0A1 chr17 42458963 + STAT5B chr17 42232137 - Exonic hg38 SKCM TCGA-YG-AA3P-06A 3 9 5'UTR-5'UTR Intra-chr q21.2 q21.2 Transcription factor Seq+ 103863 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-P4HA3 UVRAG chr11 75912039 + P4HA3 chr11 74304412 - Exonic hg38 SKCM TCGA-YG-AA3P-06A 1 15 In-Frame Intra-chr q13.5 Tumor suppressor gene q13.4 Seq+ 103864 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARRB1-PAK1 ARRB1 chr11 75351588 - PAK1 chr11 77392541 - Exonic hg38 SKCM TCGA-YG-AA3P-06A 3 4 CDS-5'UTR Intra-chr q13.4 q14.1 STE:STE20 Seq+ 103865 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM38-CAPN5 RBM38 chr20 57393333 + CAPN5 chr11 77112589 + Exonic hg38 SKCM TCGA-YG-AA3P-06A 1 12 Out-of-frame Inter-chr q13.31 Tumor suppressor gene q13.5 Seq+ 103866 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZSWIM3-PTPRT ZSWIM3 chr20 45857980 + PTPRT chr20 42885932 - Exonic hg38 SKCM TCGA-YG-AA3P-06A 1 4 Out-of-frame Intra-chr q13.12 q13.11 Oncogene Tumor suppressor gene Seq+ 103867 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLINT1-UCHL3 CLINT1 chr5 157858930 - UCHL3 chr13 75560753 + Exonic hg38 SKCM TCGA-Z2-A8RT-06A 9 38 Out-of-frame Inter-chr q33.3 q22.2 Seq+ 103868 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRAP2-ADSL GRAP2 chr22 39966036 + ADSL chr22 40349832 + Exonic hg38 SKCM TCGA-Z2-A8RT-06A 4 11 In-Frame Intra-chr q13.1 q13.1 Seq+ 103869 ChimerSeq TCGA FAWG TCGA_RNA-Seq C9orf3-TBC1D9 C9orf3 chr9 94726751 + TBC1D9 chr4 140701614 - Exonic hg38 SKCM TCGA-Z2-A8RT-06A 3 10 Out-of-frame Inter-chr q22.32 q31.21 Seq+ 103870 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRBA-TBC1D9 LRBA chr4 150735258 - TBC1D9 chr4 140662107 - Exonic hg38 SKCM TCGA-Z2-A8RT-06A 1 2 Out-of-frame Intra-chr q31.3 q31.21 Seq+ 103871 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNRK-SUCLG2 SNRK chr3 43286675 + SUCLG2 chr3 67400851 - Exonic hg38 SKCM TCGA-Z2-AA3S-06A 50 386 5'UTR-CDS Intra-chr p22.1 CAMK:CAMKL p14.1 Seq+ 103872 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOXD3-MTX2 HOXD3 chr2 176136999 + MTX2 chr2 176296860 + Exonic hg38 SKCM TCGA-Z2-AA3S-06A 3 19 5'UTR-CDS Intra-chr q31.1 Transcription factor q31.1 103873 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHTN1-HSPA12A SHTN1 chr10 116968652 - HSPA12A chr10 116707285 - Exonic hg38 SKCM TCGA-Z2-AA3S-06A 6 7 In-Frame Intra-chr q25.3 q25.3 103874 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALK-STK39 ALK chr2 29717578 - STK39 chr2 168182090 - Exonic hg38 SKCM TCGA-Z2-AA3S-06A 2 3 In-Frame Intra-chr p23.1 TK:ALK Oncogene q24.3 Seq+ 103875 ChimerSeq TCGA FAWG TCGA_RNA-Seq FHIT-ARHGEF3 FHIT chr3 61200617 - ARHGEF3 chr3 56882354 - Exonic hg38 SKCM TCGA-Z2-AA3S-06A 1 3 5'UTR-CDS Intra-chr p14.2 Tumor suppressor gene p14.3 103876 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNAB2-ACOT7 KCNAB2 chr1 6040645 + ACOT7 chr1 6349866 - Exonic hg38 SKCM TCGA-Z2-AA3V-06A 1 12 In-Frame Intra-chr p36.31 p36.31 Seq+ 103877 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYH10-RHBDD2 MYH10 chr17 8546544 - RHBDD2 chr7 75881365 + Exonic hg38 SKCM TCGA-Z2-AA3V-06A 3 3 CDS-5'UTR Inter-chr p13.1 q11.23 103878 ChimerSeq TCGA FAWG TCGA_RNA-Seq RGS12-NSG1 RGS12 chr4 3386437 + NSG1 chr4 4409573 + Exonic hg38 SKCM TCGA-Z2-AA3V-06A 2 5 Out-of-frame Intra-chr p16.3 103879 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP26-CLDN18 ARHGAP26 chr5 142913269 + CLDN18 chr3 138031723 + Exonic hg38 STAD TCGA-B7-5816-01A 58 0 Out-of-frame Inter-chr q31.3 q22.3 Seq+ 103880 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLDN18-ARHGAP26 CLDN18 chr3 138031105 + ARHGAP26 chr5 142913199 + Exonic hg38 STAD TCGA-B7-5816-01A 12 2 In-Frame Inter-chr q22.3 q31.3 KB Pub Seq+ 103881 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD44-SLC1A2 CD44 chr11 35221732 + SLC1A2 chr11 35317516 - Exonic hg38 STAD TCGA-B7-5818-01A 52 1 In-Frame Intra-chr p13 Oncogene Tumor suppressor gene p13 KB Pub Seq+ 103882 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPRC5A-NRG1 GPRC5A chr12 12891664 + NRG1 chr8 32595828 + Exonic hg38 STAD TCGA-B7-A5TN-01A 62 101 5'UTR-CDS Inter-chr p13.1 Tumor suppressor gene p12 Seq+ 103883 ChimerSeq TCGA FAWG TCGA_RNA-Seq SESN1-PPIL6 SESN1 chr6 109093795 - PPIL6 chr6 109392937 - Exonic hg38 STAD TCGA-B7-A5TN-01A 14 1 Out-of-frame Intra-chr q21 q21 Seq+ 103884 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSBP2-RPS23 SSBP2 chr5 81750981 - RPS23 chr5 82277852 - Exonic hg38 STAD TCGA-BR-4187-01A 93 20 CDS-5'UTR Intra-chr q14.1 Tumor suppressor gene q14.2 Seq+ 103885 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP2K2-DAPK3 MAP2K2 chr19 4123784 - DAPK3 chr19 3969829 - Exonic hg38 STAD TCGA-BR-4187-01A 13 3 CDS-5'UTR Intra-chr p13.3 STE:STE7 Oncogene p13.3 CAMK:DAPK Tumor suppressor gene Seq+ 103886 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZZZ3-CDH1 ZZZ3 chr1 77683262 - CDH1 chr16 68801670 + Exonic hg38 STAD TCGA-BR-4255-01A 24 18 5'UTR-5'UTR Inter-chr p31.1 Transcription factor q22.1 Oncogene Tumor suppressor gene Seq+ 103887 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC20-DEF8 CDC20 chr1 43359783 + DEF8 chr16 89959144 + Exonic hg38 STAD TCGA-BR-4255-01A 10 7 Out-of-frame Inter-chr p34.2 q24.3 Seq+ 103888 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL10AP5-MIR7111 RPL10AP5 chr1 242365650 + MIR7111 chr6 35470578 + Exonic hg38 STAD TCGA-BR-4256-01A 52 0 Out-of-frame Inter-chr q43 p21.31 103889 ChimerSeq TCGA FAWG TCGA_RNA-Seq LYZ-CLDN18 LYZ chr12 69353479 + CLDN18 chr3 138032392 + Exonic hg38 STAD TCGA-BR-4267-01A 13 29 Out-of-frame Inter-chr q15 q22.3 Seq+ 103890 ChimerSeq TCGA FAWG TCGA_RNA-Seq GBF1-AGBL1 GBF1 chr10 102260116 + AGBL1 chr15 86142004 + Exonic hg38 STAD TCGA-BR-4267-01A 15 0 Out-of-frame Inter-chr q24.32 q25.3 Seq+ 103891 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEIS2-TRPM1 MEIS2 chr15 37036814 - TRPM1 chr15 31076984 - Exonic hg38 STAD TCGA-BR-4280-01A 11 4 CDS-5'UTR Intra-chr q14 Transcription factor q13.3 Seq+ 103892 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLDN18-ARHGAP26 CLDN18 chr3 138031105 + ARHGAP26 chr5 143014080 + Exonic hg38 STAD TCGA-BR-6453-01A 5 0 In-Frame Inter-chr q22.3 q31.3 KB Pub Seq+ 103893 ChimerSeq TCGA FAWG TCGA_RNA-Seq CERS5-LIMA1 CERS5 chr12 50167101 - LIMA1 chr12 50182037 - Exonic hg38 STAD TCGA-BR-6454-01A 55 2 Out-of-frame Intra-chr q13.12 q13.12 Tumor suppressor gene Seq+ 103894 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIN54-PLAC8 LIN54 chr4 83012792 - PLAC8 chr4 83117971 - Exonic hg38 STAD TCGA-BR-6454-01A 16 2 5'UTR-5'UTR Intra-chr q21.22 Transcription factor q21.22 Seq+ 103895 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2E-ZBTB8A KMT2E chr7 105066807 + ZBTB8A chr1 32592931 + Exonic hg38 STAD TCGA-BR-6456-01A 52 1 CDS-5'UTR Inter-chr q22.3 p35.1 Transcription factor Seq+ 103896 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM2A-SYNDIG1 KDM2A chr11 67231960 + SYNDIG1 chr20 24584856 + Exonic hg38 STAD TCGA-BR-6456-01A 49 3 In-Frame Inter-chr q13.2 Transcription factor p11.21 Seq+ 103897 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNKS2-FAM107B TNKS2 chr10 91842391 + FAM107B chr10 14667691 - Exonic hg38 STAD TCGA-BR-6456-01A 27 0 Out-of-frame Intra-chr q23.32 p13 Seq+ 103898 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTMR2-CLNS1A MTMR2 chr11 95914242 - CLNS1A chr11 77629899 - Exonic hg38 STAD TCGA-BR-6456-01A 14 1 5'UTR-CDS Intra-chr q21 q14.1 Seq+ 103899 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM53B-NUAK2 FAM53B chr10 124681607 - NUAK2 chr1 205308732 - Exonic hg38 STAD TCGA-BR-6456-01A 11 1 Out-of-frame Inter-chr q26.13 q32.1 Seq+ 103900 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1orf27-EGLN1 C1orf27 chr1 186383156 + EGLN1 chr1 231374099 - Exonic hg38 STAD TCGA-BR-6458-01A 12 0 Out-of-frame Intra-chr q31.1 q42.2 Tumor suppressor gene Seq+ 103901 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAIAP2L1-CYP3A7 BAIAP2L1 chr7 98400802 - CYP3A7 chr7 99731152 - Exonic hg38 STAD TCGA-BR-6564-01A 18 1 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 103902 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBXN11-IGHJ2 UBXN11 chr1 26282851 - IGHJ2 chr14 105865249 - Exonic hg38 STAD TCGA-BR-6566-01A 22 0 Out-of-frame Inter-chr p36.11 103903 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGFR-INSL4 EGFR chr7 55019365 + INSL4 chr9 5233654 + Exonic hg38 STAD TCGA-BR-6706-01A 16 0 In-Frame Inter-chr p11.2 TK:EGFR Oncogene p24.1 Seq+ 103904 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGFR-RCL1 EGFR chr7 55019365 + RCL1 chr9 4849447 + Exonic hg38 STAD TCGA-BR-6706-01A 13 0 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene p24.1 Seq+ 103905 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXM1-DCP1B FOXM1 chr12 2866393 - DCP1B chr12 1953288 - Exonic hg38 STAD TCGA-BR-6709-01A 182 34 CDS-5'UTR Intra-chr p13.33 Transcription factor p13.33 Seq+ 103906 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZCCHC7-MLLT3 ZCCHC7 chr9 37126942 + MLLT3 chr9 20456786 - Exonic hg38 STAD TCGA-BR-6709-01A 24 0 In-Frame Intra-chr p13.2 p21.3 Seq+ 103907 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEAD4-DCAF10 TEAD4 chr12 2960040 + DCAF10 chr9 37854780 + Exonic hg38 STAD TCGA-BR-6709-01A 23 2 5'UTR-CDS Inter-chr p13.33 Transcription factor p13.2 Seq+ 103908 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAG1-CORO1B DAG1 chr3 49470433 + CORO1B chr11 67442630 - Exonic hg38 STAD TCGA-BR-6709-01A 19 1 5'UTR-5'UTR Inter-chr p21.31 q13.2 Seq+ 103909 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT5B-RTN3 KMT5B chr11 68185781 - RTN3 chr11 63749991 + Exonic hg38 STAD TCGA-BR-6709-01A 15 0 Out-of-frame Intra-chr q13.2 q13.1 103910 ChimerSeq TCGA FAWG TCGA_RNA-Seq IRF1-FOPNL IRF1 chr5 132486557 - FOPNL chr16 15879888 - Exonic hg38 STAD TCGA-BR-6709-01A 14 2 CDS-5'UTR Inter-chr q31.1 Tumor suppressor gene Transcription factor p13.11 Seq+ 103911 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAAP1-IFT74 CAAP1 chr9 26884810 - IFT74 chr9 27009020 + Exonic hg38 STAD TCGA-BR-6709-01A 12 1 In-Frame Intra-chr p21.2 p21.2 103912 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6R3-MARK2 PPP6R3 chr11 68576043 + MARK2 chr11 63895159 + Exonic hg38 STAD TCGA-BR-6802-01A 17 0 In-Frame Intra-chr q13.2 q13.1 CAMK:CAMKL Seq+ 103913 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYRK1A-PKNOX1 DYRK1A chr21 37367628 + PKNOX1 chr21 43004326 + Exonic hg38 STAD TCGA-BR-6803-01A 12 3 5'UTR-5'UTR Intra-chr q22.13 CMGC:DYRK q22.3 Tumor suppressor gene Transcription factor Seq+ 103914 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPPL3-KNTC1 SPPL3 chr12 120903845 - KNTC1 chr12 122618343 + Exonic hg38 STAD TCGA-BR-6852-01A 32 1 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 103915 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF3-DNAJC11 TCF3 chr19 1619780 - DNAJC11 chr1 6654039 - Exonic hg38 STAD TCGA-BR-7197-01A 165 78 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p36.31 Tumor suppressor gene Seq+ 103916 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFAND2B-CYP27A1 ZFAND2B chr2 219207042 + CYP27A1 chr2 218809577 + Exonic hg38 STAD TCGA-BR-7197-01A 16 10 Out-of-frame Intra-chr q35 q35 Seq+ 103917 ChimerSeq TCGA FAWG TCGA_RNA-Seq OLFM2-PSENEN OLFM2 chr19 9936304 - PSENEN chr19 35745835 + Exonic hg38 STAD TCGA-BR-7197-01A 7 9 CDS-5'UTR Intra-chr p13.2 q13.12 Seq+ 103918 ChimerSeq TCGA FAWG TCGA_RNA-Seq ULK1-SFSWAP ULK1 chr12 131895824 + SFSWAP chr12 131797178 + Exonic hg38 STAD TCGA-BR-7704-01A 155 34 Out-of-frame Intra-chr q24.33 Other:ULK q24.33 Seq+ 103919 ChimerSeq TCGA FAWG TCGA_RNA-Seq MFSD8-HIPK2 MFSD8 chr4 127949804 - HIPK2 chr7 139620563 - Exonic hg38 STAD TCGA-BR-7704-01A 10 0 Out-of-frame Inter-chr q28.2 q34 CMGC:DYRK Tumor suppressor gene Seq+ 103920 ChimerSeq TCGA FAWG TCGA_RNA-Seq FIP1L1-SCFD2 FIP1L1 chr4 53399839 + SCFD2 chr4 53313763 - Exonic hg38 STAD TCGA-BR-7707-01A 13 1 In-Frame Intra-chr q12 q12 Seq+ 103921 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAA15-MGST2 NAA15 chr4 139301831 + MGST2 chr4 139740212 + Exonic hg38 STAD TCGA-BR-7715-01A 40 1 CDS-3'UTR Intra-chr q31.1 q31.1 Seq+ 103922 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT11-FAM198B SEPT11 chr4 76996539 + FAM198B chr4 158131012 - Exonic hg38 STAD TCGA-BR-7715-01A 37 1 Out-of-frame Intra-chr q21.1 q32.1 Seq+ 103923 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIN4-HDAC8 PIN4 chrX 72196904 + HDAC8 chrX 72351838 - Exonic hg38 STAD TCGA-BR-7715-01A 10 1 In-Frame Intra-chr q13.1 q13.1 Seq+ 103924 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOMM20-EPHB2 TOMM20 chr1 235128595 - EPHB2 chr1 22882359 + Exonic hg38 STAD TCGA-BR-7716-01A 106 19 In-Frame Intra-chr q42.3 p36.12 Tumor suppressor gene Seq+ 103925 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAPGEF1-WDR83 RAPGEF1 chr9 131739770 - WDR83 chr19 12672847 + Exonic hg38 STAD TCGA-BR-7716-01A 65 19 Out-of-frame Inter-chr q34.13 p13.13 Seq+ 103926 ChimerSeq TCGA FAWG TCGA_RNA-Seq SVIL-TAF3 SVIL chr10 29657969 - TAF3 chr10 7963920 + Exonic hg38 STAD TCGA-BR-7716-01A 37 7 5'UTR-CDS Intra-chr p11.23 p14 Seq+ 103927 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSU1-PARG RSU1 chr10 16752539 - PARG chr10 49843632 - Exonic hg38 STAD TCGA-BR-7716-01A 32 4 In-Frame Intra-chr p13 q11.23 Seq+ 103928 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMYND11-PCDH15 ZMYND11 chr10 180128 + PCDH15 chr10 54090063 - Exonic hg38 STAD TCGA-BR-7716-01A 24 9 Out-of-frame Intra-chr p15.3 Tumor suppressor gene q21.1 Seq+ 103929 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARD3B-SLC50A1 PARD3B chr2 204546119 + SLC50A1 chr1 155137979 + Exonic hg38 STAD TCGA-BR-7716-01A 19 5 In-Frame Inter-chr q33.3 q22 Seq+ 103930 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP3CC-PIWIL2 PPP3CC chr8 22441458 + PIWIL2 chr8 22352959 + Exonic hg38 STAD TCGA-BR-7716-01A 17 7 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.3 Tumor suppressor gene Seq+ 103931 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRG7-LNP1 ADGRG7 chr3 100669105 + LNP1 chr3 100451719 + Exonic hg38 STAD TCGA-BR-7716-01A 16 3 In-Frame Intra-chr q12.2 q12.2 103932 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCTN1-M1AP DCTN1 chr2 74378000 - M1AP chr2 74640327 - Exonic hg38 STAD TCGA-BR-7716-01A 14 5 CDS-5'UTR Intra-chr p13.1 p13.1 Seq+ 103933 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK13-POU6F2 CDK13 chr7 40078851 + POU6F2 chr7 39339642 + Exonic hg38 STAD TCGA-BR-7716-01A 14 4 Out-of-frame Intra-chr p14.1 p14.1 Tumor suppressor gene Transcription factor Seq+ 103934 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP39-ZNF16 ARHGAP39 chr8 144545249 - ZNF16 chr8 144932590 - Exonic hg38 STAD TCGA-BR-7716-01A 6 11 In-Frame Intra-chr q24.3 q24.3 Transcription factor Seq+ 103935 ChimerSeq TCGA FAWG TCGA_RNA-Seq PINX1-HGSNAT PINX1 chr8 10826152 - HGSNAT chr8 43182145 + Exonic hg38 STAD TCGA-BR-7717-01A 60 9 3'UTR-CDS Intra-chr p23.1 Tumor suppressor gene p11.21 Seq+ 103936 ChimerSeq TCGA FAWG TCGA_RNA-Seq VAPB-RBM38 VAPB chr20 58389517 + RBM38 chr20 57392654 + Exonic hg38 STAD TCGA-BR-7717-01A 18 2 Out-of-frame Intra-chr q13.32 q13.31 Tumor suppressor gene Seq+ 103937 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHMP4B-EDEM2 CHMP4B chr20 33811658 + EDEM2 chr20 35115933 - Exonic hg38 STAD TCGA-BR-7723-01A 73 3 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 103938 ChimerSeq TCGA FAWG TCGA_RNA-Seq RANGAP1-HECTD4 RANGAP1 chr22 41274600 - HECTD4 chr12 112208630 - Exonic hg38 STAD TCGA-BR-7723-01A 18 4 Out-of-frame Inter-chr q13.2 q24.13 Seq+ 103939 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF169-POLD3 RNF169 chr11 74789699 + POLD3 chr11 74611499 + Exonic hg38 STAD TCGA-BR-7723-01A 16 3 In-Frame Intra-chr q13.4 q13.4 Seq+ 103940 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCC1-DLGAP1 ABCC1 chr16 15949799 + DLGAP1 chr18 3582248 - Exonic hg38 STAD TCGA-BR-7723-01A 16 1 3'UTR-CDS Inter-chr p11.31 Seq+ 103941 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM116-RANGAP1 TMEM116 chr12 112013002 - RANGAP1 chr22 41268156 - Exonic hg38 STAD TCGA-BR-7723-01A 14 0 5'UTR-CDS Inter-chr q24.13 q13.2 Seq+ 103942 ChimerSeq TCGA FAWG TCGA_RNA-Seq COMMD7-MMP24 COMMD7 chr20 32727893 - MMP24 chr20 35263791 + Exonic hg38 STAD TCGA-BR-7723-01A 10 4 In-Frame Intra-chr q11.21 q11.22 Seq+ 103943 ChimerSeq TCGA FAWG TCGA_RNA-Seq P3H4-URI1 P3H4 chr17 41811132 - URI1 chr19 29971193 + Exonic hg38 STAD TCGA-BR-7723-01A 8 3 In-Frame Inter-chr q21.2 q12 103944 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-CNTN6 SHANK2 chr11 71147120 - CNTN6 chr3 1278413 + Exonic hg38 STAD TCGA-BR-7723-01A 8 2 Out-of-frame Inter-chr q13.4 p26.3 Seq+ 103945 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC11-WWC2 TRAPPC11 chr4 183686748 + WWC2 chr4 183280776 + Exonic hg38 STAD TCGA-BR-7723-01A 8 2 In-Frame Intra-chr q35.1 q35.1 Seq+ 103946 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK2-RTN3 MARK2 chr11 63839560 + RTN3 chr11 63749991 + Exonic hg38 STAD TCGA-BR-7851-01A 9 2 Out-of-frame Intra-chr q13.1 CAMK:CAMKL q13.1 Seq+ 103947 ChimerSeq TCGA FAWG TCGA_RNA-Seq BACE2-WDR81 BACE2 chr21 41168575 + WDR81 chr17 1735572 + Exonic hg38 STAD TCGA-BR-7901-01A 103 151 CDS-3'UTR Inter-chr q22.2 Seq+ 103948 ChimerSeq TCGA FAWG TCGA_RNA-Seq EDF1-DPP7 EDF1 chr9 136866181 - DPP7 chr9 137110950 - Exonic hg38 STAD TCGA-BR-7901-01A 23 13 In-Frame Intra-chr q34.3 q34.3 Seq+ 103949 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRD4-MFSD12 BRD4 chr19 15332290 - MFSD12 chr19 3538756 - Exonic hg38 STAD TCGA-BR-7901-01A 18 6 5'UTR-3'UTR Intra-chr p13.12 Atypical:BRD p13.3 103950 ChimerSeq TCGA FAWG TCGA_RNA-Seq LUC7L3-ABCC3 LUC7L3 chr17 50719831 + ABCC3 chr17 50667554 + Exonic hg38 STAD TCGA-BR-7901-01A 16 8 In-Frame Intra-chr q21.33 q21.33 Seq+ 103951 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1XR1-ROCK1 TBL1XR1 chr3 177197121 - ROCK1 chr18 21039563 - Exonic hg38 STAD TCGA-BR-7901-01A 14 13 5'UTR-CDS Inter-chr q26.32 q11.1 AGC:DMPK Seq+ 103952 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYB5R3-ARFGAP3 CYB5R3 chr22 42649295 - ARFGAP3 chr22 42799160 - Exonic hg38 STAD TCGA-BR-7901-01A 13 6 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 103953 ChimerSeq TCGA FAWG TCGA_RNA-Seq NBEAL2-ATP2A3 NBEAL2 chr3 46979912 + ATP2A3 chr17 3945148 - Exonic hg38 STAD TCGA-BR-7901-01A 10 18 In-Frame Inter-chr p21.31 p13.2 Seq+ 103954 ChimerSeq TCGA FAWG TCGA_RNA-Seq CWC25-PLXDC1 CWC25 chr17 38812795 - PLXDC1 chr17 39109391 - Exonic hg38 STAD TCGA-BR-7901-01A 12 6 5'UTR-CDS Intra-chr q12 q12 Seq+ 103955 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM2-WDR35 PUM2 chr2 20327310 - WDR35 chr2 19930552 - Exonic hg38 STAD TCGA-BR-7901-01A 10 8 In-Frame Intra-chr p24.1 p24.1 103956 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEK2-TMEM229B PLEK2 chr14 67412018 - TMEM229B chr14 67473941 - Exonic hg38 STAD TCGA-BR-7901-01A 10 5 CDS-5'UTR Intra-chr q24.1 q24.1 Seq+ 103957 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM83E-HSD17B14 FAM83E chr19 48609876 - HSD17B14 chr19 48815141 - Exonic hg38 STAD TCGA-BR-7901-01A 9 5 Out-of-frame Intra-chr q13.33 q13.33 103958 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRSF3-BCAR4 SRSF3 chr6 36594481 + BCAR4 chr16 11820297 - Exonic hg38 STAD TCGA-BR-7901-01A 7 12 5'UTR-3'UTR Inter-chr p21.31 p13.13 103959 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF585B-MYRIP ZNF585B chr19 37207040 - MYRIP chr3 40182220 + Exonic hg38 STAD TCGA-BR-7901-01A 6 11 In-Frame Inter-chr q13.12 Transcription factor p22.1 Seq+ 103960 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKDC-SPIDR PRKDC chr8 47834196 - SPIDR chr8 47279270 + Exonic hg38 STAD TCGA-BR-7901-01A 2 0 CDS-5'UTR Intra-chr q11.21 Oncogene q11.21 103961 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R13L-RAB44 PPP1R13L chr19 45396675 - RAB44 chr6 36732673 + Exonic hg38 STAD TCGA-BR-7958-01A 38 14 Out-of-frame Inter-chr q13.32 p21.2 103962 ChimerSeq TCGA FAWG TCGA_RNA-Seq NT5DC3-KNTC1 NT5DC3 chr12 103840949 - KNTC1 chr12 122610822 + Exonic hg38 STAD TCGA-BR-7959-01A 247 106 Out-of-frame Intra-chr q23.3 q24.31 Seq+ 103963 ChimerSeq TCGA FAWG TCGA_RNA-Seq APAF1-HOXC10 APAF1 chr12 98648497 + HOXC10 chr12 53989169 + Exonic hg38 STAD TCGA-BR-7959-01A 131 124 Out-of-frame Intra-chr q23.1 Tumor suppressor gene q13.13 Transcription factor Seq+ 103964 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPO-CS TMPO chr12 98537572 + CS chr12 56286645 - Exonic hg38 STAD TCGA-BR-7959-01A 60 32 In-Frame Intra-chr q23.1 q13.3 Seq+ 103965 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPPP-FAM134B TPPP chr5 677750 - FAM134B chr5 16572102 - Exonic hg38 STAD TCGA-BR-7959-01A 36 16 Out-of-frame Intra-chr p15.33 Seq+ 103966 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP1-KNTC1 SRGAP1 chr12 63844883 + KNTC1 chr12 122590607 + Exonic hg38 STAD TCGA-BR-7959-01A 26 7 Out-of-frame Intra-chr q14.2 q24.31 Seq+ 103967 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP6NL-ITIH5 USP6NL chr10 11509595 - ITIH5 chr10 7655675 - Exonic hg38 STAD TCGA-BR-8058-01A 14 5 In-Frame Intra-chr p14 p14 Seq+ 103968 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXJ3-EIF4G3 FOXJ3 chr1 42335626 - EIF4G3 chr1 20942330 - Exonic hg38 STAD TCGA-BR-8058-01A 11 8 5'UTR-CDS Intra-chr p34.2 Transcription factor p36.12 Seq+ 103969 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR3-TACC3 FGFR3 chr4 1806934 + TACC3 chr4 1739702 + Exonic hg38 STAD TCGA-BR-8058-01A 4 0 In-Frame Intra-chr p16.3 TK:FGFR Oncogene p16.3 KB Pub Seq+ 103970 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R12C-PTPRH PPP1R12C chr19 55112467 - PTPRH chr19 55182151 - Exonic hg38 STAD TCGA-BR-8059-01A 21 3 Out-of-frame Intra-chr q13.42 q13.42 Seq+ 103971 ChimerSeq TCGA FAWG TCGA_RNA-Seq NET1-TUBAL3 NET1 chr10 5412820 + TUBAL3 chr10 5395475 - Exonic hg38 STAD TCGA-BR-8059-01A 9 8 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 103972 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD24-BEND3 CD24 chr6 106974578 - BEND3 chr6 107070950 - Exonic hg38 STAD TCGA-BR-8060-01A 263 159 In-Frame Intra-chr q21 q21 103973 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOA-GMPPB RHOA chr3 49411820 - GMPPB chr3 49722147 - Exonic hg38 STAD TCGA-BR-8060-01A 100 28 5'UTR-CDS Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 103974 ChimerSeq TCGA FAWG TCGA_RNA-Seq GUCY2C-ART4 GUCY2C chr12 14628646 - ART4 chr12 14829462 - Exonic hg38 STAD TCGA-BR-8060-01A 98 27 Out-of-frame Intra-chr p12.3 Tumor suppressor gene p12.3 Seq+ 103975 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTN4IP1-QRSL1 RTN4IP1 chr6 106619202 - QRSL1 chr6 106662980 + Exonic hg38 STAD TCGA-BR-8060-01A 88 45 In-Frame Intra-chr q21 Tumor suppressor gene q21 103976 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-GSDMB FBXL20 chr17 39401361 - GSDMB chr17 39912497 - Exonic hg38 STAD TCGA-BR-8060-01A 80 62 Out-of-frame Intra-chr q12 q21.1 Seq+ 103977 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC14-SMARCC2 DNAJC14 chr12 55823070 - SMARCC2 chr12 56174764 - Exonic hg38 STAD TCGA-BR-8060-01A 80 52 In-Frame Intra-chr q13.2 q13.2 Seq+ 103978 ChimerSeq TCGA FAWG TCGA_RNA-Seq C9orf85-C9orf57 C9orf85 chr9 71947112 + C9orf57 chr9 72052435 - Exonic hg38 STAD TCGA-BR-8060-01A 52 24 Out-of-frame Intra-chr q21.13 q21.13 Seq+ 103979 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHCYL1-GNAI3 AHCYL1 chr1 109985172 + GNAI3 chr1 109582437 + Exonic hg38 STAD TCGA-BR-8060-01A 40 32 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p13.3 Seq+ 103980 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEAD2-NOSIP TEAD2 chr19 49355148 - NOSIP chr19 49557249 - Exonic hg38 STAD TCGA-BR-8060-01A 43 19 Out-of-frame Intra-chr q13.33 Transcription factor q13.33 Seq+ 103981 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHF1-C19orf12 PLEKHF1 chr19 29665505 + C19orf12 chr19 29708423 - Exonic hg38 STAD TCGA-BR-8060-01A 40 10 5'UTR-5'UTR Intra-chr q12 q12 Seq+ 103982 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC38A10-NPLOC4 SLC38A10 chr17 81251493 - NPLOC4 chr17 81572088 - Exonic hg38 STAD TCGA-BR-8060-01A 32 30 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 103983 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACACA-SYNRG ACACA chr17 37330173 - SYNRG chr17 37517580 - Exonic hg38 STAD TCGA-BR-8060-01A 35 17 5'UTR-5'UTR Intra-chr 103984 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLG1-PCSK5 DLG1 chr3 197194425 - PCSK5 chr9 76321422 + Exonic hg38 STAD TCGA-BR-8060-01A 28 21 Out-of-frame Inter-chr q29 Tumor suppressor gene q21.13 Seq+ 103985 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHH1-RAD51B PLEKHH1 chr14 67559691 + RAD51B chr14 68291884 + Exonic hg38 STAD TCGA-BR-8060-01A 30 8 In-Frame Intra-chr q24.1 q24.1 103986 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD2AP-UQCRH CD2AP chr6 47503440 + UQCRH chr1 46316552 + Exonic hg38 STAD TCGA-BR-8060-01A 25 13 In-Frame Inter-chr p12.3 p33 Seq+ 103987 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2J2-CFAP74 UBE2J2 chr1 1263346 - CFAP74 chr1 1959209 - Exonic hg38 STAD TCGA-BR-8060-01A 24 6 Out-of-frame Intra-chr p36.33 p36.33 103988 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS8-HTR3C VPS8 chr3 184812225 + HTR3C chr3 184055312 + Exonic hg38 STAD TCGA-BR-8060-01A 20 3 5'UTR-CDS Intra-chr q27.2 q27.1 103989 ChimerSeq TCGA FAWG TCGA_RNA-Seq URM1-TP53BP1 URM1 chr9 128378106 + TP53BP1 chr15 43470066 - Exonic hg38 STAD TCGA-BR-8060-01A 7 29 In-Frame Inter-chr q34.11 q15.3 Tumor suppressor gene Seq+ 103990 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLG1-GCNT1 DLG1 chr3 197282679 - GCNT1 chr9 76500916 + Exonic hg38 STAD TCGA-BR-8060-01A 10 7 CDS-5'UTR Inter-chr q29 Tumor suppressor gene q21.13 103991 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM132B-PLPP4 TMEM132B chr12 125583994 + PLPP4 chr10 120503818 + Exonic hg38 STAD TCGA-BR-8060-01A 9 5 Out-of-frame Inter-chr q24.31 q26.12 103992 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADNP-KCNG1 ADNP chr20 50930826 - KCNG1 chr20 51010364 - Exonic hg38 STAD TCGA-BR-8060-01A 8 7 5'UTR-5'UTR Intra-chr q13.13 Transcription factor q13.13 Seq+ 103993 ChimerSeq TCGA FAWG TCGA_RNA-Seq HLTF-TM4SF1 HLTF chr3 149042166 - TM4SF1 chr3 149375769 - Exonic hg38 STAD TCGA-BR-8060-01A 7 7 Out-of-frame Intra-chr q24 Tumor suppressor gene q25.1 103994 ChimerSeq TCGA FAWG TCGA_RNA-Seq XPR1-KHDRBS1 XPR1 chr1 180682411 + KHDRBS1 chr1 32030298 + Exonic hg38 STAD TCGA-BR-8060-01A 7 7 In-Frame Intra-chr q25.3 p35.2 103995 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPX2-ACLY TPX2 chr20 31742647 + ACLY chr17 41913900 - Exonic hg38 STAD TCGA-BR-8077-01A 36 13 5'UTR-CDS Inter-chr q11.21 q21.2 Seq+ 103996 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFB2M-SMYD3 TFB2M chr1 246564346 - SMYD3 chr1 245929937 - Exonic hg38 STAD TCGA-BR-8077-01A 32 15 In-Frame Intra-chr q44 q44 Transcription factor Seq+ 103997 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND4A-HBD DENND4A chr15 65792010 - HBD chr11 5234213 - Exonic hg38 STAD TCGA-BR-8077-01A 21 4 5'UTR-CDS Inter-chr q22.31 p15.4 Seq+ 103998 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUPL2-DFNA5 NUPL2 chr7 23182206 + DFNA5 chr7 24719218 - Exonic hg38 STAD TCGA-BR-8077-01A 13 10 Out-of-frame Intra-chr p15.3 p15.3 Tumor suppressor gene Seq+ 103999 ChimerSeq TCGA FAWG TCGA_RNA-Seq YAF2-ZCRB1 YAF2 chr12 42210355 - ZCRB1 chr12 42313986 - Exonic hg38 STAD TCGA-BR-8077-01A 9 8 3'UTR-CDS Intra-chr q12 q12 Seq+ 104000 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR2-TACC2 FGFR2 chr10 121483698 - TACC2 chr10 122237395 + Exonic hg38 STAD TCGA-BR-8080-01A 54 27 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q26.13 Seq+ 104001 ChimerSeq TCGA FAWG TCGA_RNA-Seq MMP15-DRC7 MMP15 chr16 58026512 + DRC7 chr16 57727299 + Exonic hg38 STAD TCGA-BR-8080-01A 34 17 In-Frame Intra-chr q21 q21 104002 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSI2-RNF135 MSI2 chr17 57401471 + RNF135 chr17 30984617 + Exonic hg38 STAD TCGA-BR-8080-01A 10 5 In-Frame Intra-chr q22 q11.2 Seq+ 104003 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF3-C19orf25 TCF3 chr19 1619111 - C19orf25 chr19 1461824 - Exonic hg38 STAD TCGA-BR-8080-01A 4 8 CDS-3'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p13.3 Seq+ 104004 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-TEX14 NF1 chr17 31159093 + TEX14 chr17 58584600 - Exonic hg38 STAD TCGA-BR-8080-01A 2 5 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q22 Seq+ 104005 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLDN18-ARHGAP26 CLDN18 chr3 138031105 + ARHGAP26 chr5 143014080 + Exonic hg38 STAD TCGA-BR-8284-01A 39 10 In-Frame Inter-chr q22.3 q31.3 KB Pub Seq+ 104006 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM120A-CARD19 FAM120A chr9 93452389 + CARD19 chr9 93112992 + Exonic hg38 STAD TCGA-BR-8289-01A 234 90 Out-of-frame Intra-chr q22.31 q22.31 104007 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALE-PITHD1 GALE chr1 23799368 - PITHD1 chr1 23785673 + Exonic hg38 STAD TCGA-BR-8289-01A 81 137 Out-of-frame Intra-chr p36.11 p36.11 Seq+ 104008 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB1A-C7orf50 RAB1A chr2 65129893 - C7orf50 chr7 1000551 - Exonic hg38 STAD TCGA-BR-8289-01A 98 27 In-Frame Inter-chr p14 p22.3 Seq+ 104009 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBFA2T2-ACOX1 CBFA2T2 chr20 33490301 + ACOX1 chr17 75957566 - Exonic hg38 STAD TCGA-BR-8289-01A 77 3 In-Frame Inter-chr q11.21 q25.1 Seq+ 104010 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP1A1-IGSF3 ATP1A1 chr1 116403975 + IGSF3 chr1 116579877 - Exonic hg38 STAD TCGA-BR-8289-01A 63 18 In-Frame Intra-chr p13.1 p13.1 Seq+ 104011 ChimerSeq TCGA FAWG TCGA_RNA-Seq GDE1-FLYWCH2 GDE1 chr16 19510839 - FLYWCH2 chr16 2895220 + Exonic hg38 STAD TCGA-BR-8289-01A 54 34 CDS-5'UTR Intra-chr p12.3 p13.3 Seq+ 104012 ChimerSeq TCGA FAWG TCGA_RNA-Seq FKBP11-PRKAG1 FKBP11 chr12 48923782 - PRKAG1 chr12 49005852 - Exonic hg38 STAD TCGA-BR-8289-01A 44 14 In-Frame Intra-chr q13.12 q13.12 Seq+ 104013 ChimerSeq TCGA FAWG TCGA_RNA-Seq IHH-NHEJ1 IHH chr2 219055816 - NHEJ1 chr2 219078206 - Exonic hg38 STAD TCGA-BR-8289-01A 42 15 In-Frame Intra-chr q35 q35 Seq+ 104014 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1456-LEKR1 KIAA1456 chr8 12952358 + LEKR1 chr3 157045340 + Exonic hg38 STAD TCGA-BR-8289-01A 40 19 Out-of-frame Inter-chr p22 q25.31 Seq+ 104015 ChimerSeq TCGA FAWG TCGA_RNA-Seq CFDP1-CHST6 CFDP1 chr16 75395090 - CHST6 chr16 75473467 - Exonic hg38 STAD TCGA-BR-8289-01A 39 16 CDS-3'UTR Intra-chr q23.1 q23.1 104016 ChimerSeq TCGA FAWG TCGA_RNA-Seq SON-IL10RB SON chr21 33559775 + IL10RB chr21 33296184 + Exonic hg38 STAD TCGA-BR-8289-01A 29 13 In-Frame Intra-chr q22.11 Transcription factor q22.11 Seq+ 104017 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCOF1-GPX3 TCOF1 chr5 150361211 + GPX3 chr5 151025340 + Exonic hg38 STAD TCGA-BR-8289-01A 23 1 Out-of-frame Intra-chr q32 q33.1 Tumor suppressor gene Seq+ 104018 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOCS1-BCAR4 SOCS1 chr16 11256079 - BCAR4 chr16 11820297 - Exonic hg38 STAD TCGA-BR-8289-01A 17 18 5'UTR-3'UTR Intra-chr p13.13 Oncogene Tumor suppressor gene p13.13 Seq+ 104019 ChimerSeq TCGA FAWG TCGA_RNA-Seq THRA-CDK12 THRA chr17 40089333 + CDK12 chr17 39530631 + Exonic hg38 STAD TCGA-BR-8289-01A 19 9 Out-of-frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q12 Oncogene Seq+ 104020 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM5A-NINJ2 KDM5A chr12 350621 - NINJ2 chr12 566178 - Exonic hg38 STAD TCGA-BR-8289-01A 20 1 In-Frame Intra-chr p13.33 Tumor suppressor gene p13.33 Seq+ 104021 ChimerSeq TCGA FAWG TCGA_RNA-Seq URI1-C19orf12 URI1 chr19 29942664 + C19orf12 chr19 29702977 - Exonic hg38 STAD TCGA-BR-8289-01A 16 9 Out-of-frame Intra-chr q12 q12 Seq+ 104022 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF681-IMMP2L ZNF681 chr19 23758747 - IMMP2L chr7 110963565 - Exonic hg38 STAD TCGA-BR-8289-01A 13 12 Out-of-frame Inter-chr p12 Transcription factor q31.1 Seq+ 104023 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP6NL-UPF2 USP6NL chr10 11481770 - UPF2 chr10 11943168 - Exonic hg38 STAD TCGA-BR-8289-01A 13 7 Out-of-frame Intra-chr p14 p14 Seq+ 104024 ChimerSeq TCGA FAWG TCGA_RNA-Seq TECR-TGFBR3L TECR chr19 14529711 + TGFBR3L chr19 7918057 + Exonic hg38 STAD TCGA-BR-8289-01A 9 21 Out-of-frame Intra-chr p13.12 p13.2 Seq+ 104025 ChimerSeq TCGA FAWG TCGA_RNA-Seq TECR-GIPC1 TECR chr19 14529711 + GIPC1 chr19 14483006 - Exonic hg38 STAD TCGA-BR-8289-01A 5 34 5'UTR-5'UTR Intra-chr p13.12 p13.12 Seq+ 104026 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM76A-GPR3 FAM76A chr1 27749154 + GPR3 chr1 27393794 + Exonic hg38 STAD TCGA-BR-8289-01A 10 6 CDS-5'UTR Intra-chr p35.3 p36.11 Seq+ 104027 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGM2L1-CHRDL2 PGM2L1 chr11 74398051 - CHRDL2 chr11 74713479 - Exonic hg38 STAD TCGA-BR-8289-01A 9 6 In-Frame Intra-chr q13.4 q13.4 Seq+ 104028 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK11-BSG STK11 chr19 1207203 + BSG chr19 580379 + Exonic hg38 STAD TCGA-BR-8289-01A 9 6 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 104029 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R1C-EIF2B2 PPP1R1C chr2 181954634 + EIF2B2 chr14 75003275 + Exonic hg38 STAD TCGA-BR-8289-01A 5 10 5'UTR-CDS Inter-chr q31.3 q24.3 Seq+ 104030 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM5A-NINJ2 KDM5A chr12 295573 - NINJ2 chr12 566178 - Exonic hg38 STAD TCGA-BR-8295-01A 114 21 In-Frame Intra-chr p13.33 Tumor suppressor gene p13.33 Seq+ 104031 ChimerSeq TCGA FAWG TCGA_RNA-Seq PACSIN2-LGALS1 PACSIN2 chr22 42876137 - LGALS1 chr22 37676986 + Exonic hg38 STAD TCGA-BR-8295-01A 14 6 Out-of-frame Intra-chr q13.2 q13.1 Seq+ 104032 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNNA1-SCUBE1 CTNNA1 chr5 138753510 + SCUBE1 chr22 43221289 - Exonic hg38 STAD TCGA-BR-8295-01A 7 10 5'UTR-CDS Inter-chr q31.2 Oncogene q13.2 Seq+ 104033 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCYL3-KIFAP3 SCYL3 chr1 169888676 - KIFAP3 chr1 170016624 - Exonic hg38 STAD TCGA-BR-8297-01A 23 19 In-Frame Intra-chr q24.2 Other:SCY1 q24.2 Seq+ 104034 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK24-DOCK9 STK24 chr13 98576745 - DOCK9 chr13 98797253 - Exonic hg38 STAD TCGA-BR-8297-01A 16 6 Out-of-frame Intra-chr q32.2 q32.3 Seq+ 104035 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELL-LRRC25 ELL chr19 18521921 - LRRC25 chr19 18392125 - Exonic hg38 STAD TCGA-BR-8297-01A 13 2 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 104036 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA3-NDUFS8 LAMA3 chr18 23784157 + NDUFS8 chr11 68032923 + Exonic hg38 STAD TCGA-BR-8297-01A 7 8 In-Frame Inter-chr q11.2 q13.2 Seq+ 104037 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASZ1-MTOR CASZ1 chr1 10796564 - MTOR chr1 11130777 - Exonic hg38 STAD TCGA-BR-8297-01A 4 0 5'UTR-CDS Intra-chr p36.22 Transcription factor p36.22 Oncogene Seq+ 104038 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCMF1-DNAH6 KCMF1 chr2 84971467 + DNAH6 chr2 84796306 + Exonic hg38 STAD TCGA-BR-8361-01A 169 69 CDS-3'UTR Intra-chr p11.2 Transcription factor p11.2 Seq+ 104039 ChimerSeq TCGA FAWG TCGA_RNA-Seq POGZ-PI4KB POGZ chr1 151459152 - PI4KB chr1 151294541 - Exonic hg38 STAD TCGA-BR-8361-01A 23 19 5'UTR-CDS Intra-chr q21.3 q21.3 Seq+ 104040 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXNA3-ATP6AP1 PLXNA3 chrX 154471638 + ATP6AP1 chrX 154431830 + Exonic hg38 STAD TCGA-BR-8361-01A 21 10 In-Frame Intra-chr q28 q28 Seq+ 104041 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDHC-KLHDC9 SDHC chr1 161356840 + KLHDC9 chr1 161100061 + Exonic hg38 STAD TCGA-BR-8361-01A 17 4 Out-of-frame Intra-chr q23.3 Oncogene q23.3 Seq+ 104042 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFMID-TMC8 AFMID chr17 78202751 + TMC8 chr17 78140834 + Exonic hg38 STAD TCGA-BR-8361-01A 13 17 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 104043 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLASRP-PPP1R37 CLASRP chr19 45040311 + PPP1R37 chr19 45145207 + Exonic hg38 STAD TCGA-BR-8361-01A 14 6 Out-of-frame Intra-chr q13.32 q13.32 Seq+ 104044 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPTOR-DGKZ RPTOR chr17 80754185 + DGKZ chr11 46367291 + Exonic hg38 STAD TCGA-BR-8361-01A 14 1 In-Frame Inter-chr q25.3 p11.2 104045 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPL-ADCY9 PPL chr16 4936984 - ADCY9 chr16 4007558 - Exonic hg38 STAD TCGA-BR-8361-01A 11 1 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 104046 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFP1-IGKJ4 ZFP1 chr16 75149198 + IGKJ4 chr2 88860921 - Exonic hg38 STAD TCGA-BR-8363-01A 137 0 Out-of-frame Inter-chr q23.1 Transcription factor p11.2 Seq+ 104047 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARD3-COLQ PARD3 chr10 34470085 - COLQ chr3 15479382 - Exonic hg38 STAD TCGA-BR-8365-01A 9 5 In-Frame Inter-chr p11.21 p25.1 Seq+ 104048 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLDN18-ARHGAP26 CLDN18 chr3 138031105 + ARHGAP26 chr5 143014080 + Exonic hg38 STAD TCGA-BR-8367-01A 20 10 In-Frame Inter-chr q22.3 q31.3 KB Pub Seq+ 104049 ChimerSeq TCGA FAWG TCGA_RNA-Seq TACC2-ZNF365 TACC2 chr10 122143706 + ZNF365 chr10 62459741 + Exonic hg38 STAD TCGA-BR-8368-01A 18 14 Out-of-frame Intra-chr q26.13 q21.2 Transcription factor Seq+ 104050 ChimerSeq TCGA FAWG TCGA_RNA-Seq HEXB-FAM169A HEXB chr5 74705320 + FAM169A chr5 74783134 - Exonic hg38 STAD TCGA-BR-8373-01A 95 36 In-Frame Intra-chr q13.3 q13.3 Seq+ 104051 ChimerSeq TCGA FAWG TCGA_RNA-Seq C21orf59-URB1 C21orf59 chr21 32607649 - URB1 chr21 32378541 - Exonic hg38 STAD TCGA-BR-8373-01A 71 22 Out-of-frame Intra-chr q22.11 q22.11 Seq+ 104052 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMG5-PMF1 SMG5 chr1 156265781 - PMF1 chr1 156236288 + Exonic hg38 STAD TCGA-BR-8373-01A 63 47 Out-of-frame Intra-chr q22 q22 Seq+ 104053 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-QRSL1 PVT1 chr8 127794734 + QRSL1 chr6 106662980 + Exonic hg38 STAD TCGA-BR-8373-01A 49 43 5'UTR-CDS Inter-chr q24.21 q21 Seq+ 104054 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBNL2-HS6ST3 MBNL2 chr13 97276409 + HS6ST3 chr13 96832490 + Exonic hg38 STAD TCGA-BR-8373-01A 35 15 Out-of-frame Intra-chr q32.1 Transcription factor q32.1 Seq+ 104055 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANAPC5-KDM2B ANAPC5 chr12 121335533 - KDM2B chr12 121430469 - Exonic hg38 STAD TCGA-BR-8373-01A 28 21 Out-of-frame Intra-chr q24.31 q24.31 Transcription factor Seq+ 104056 ChimerSeq TCGA FAWG TCGA_RNA-Seq GDI2-IL2RA GDI2 chr10 5773842 - IL2RA chr10 6012896 - Exonic hg38 STAD TCGA-BR-8373-01A 28 10 Out-of-frame Intra-chr p15.1 p15.1 Seq+ 104057 ChimerSeq TCGA FAWG TCGA_RNA-Seq ISYNA1-SUGP2 ISYNA1 chr19 18434536 - SUGP2 chr19 18991652 - Exonic hg38 STAD TCGA-BR-8373-01A 28 9 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 104058 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP5-NPAS3 ARHGAP5 chr14 32094386 + NPAS3 chr14 33367186 + Exonic hg38 STAD TCGA-BR-8373-01A 24 18 Out-of-frame Intra-chr q12 q13.1 Transcription factor Seq+ 104059 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC7A7-TMEM114 SLC7A7 chr14 22778793 - TMEM114 chr16 8537826 - Exonic hg38 STAD TCGA-BR-8373-01A 27 5 Out-of-frame Inter-chr q11.2 p13.2 104060 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGB5-ZNF148 ITGB5 chr3 124809022 - ZNF148 chr3 125313656 - Exonic hg38 STAD TCGA-BR-8373-01A 23 10 CDS-5'UTR Intra-chr q21.2 q21.2 Transcription factor Seq+ 104061 ChimerSeq TCGA FAWG TCGA_RNA-Seq IKBKAP-EPB41L4B IKBKAP chr9 108933864 - EPB41L4B chr9 109279921 - Exonic hg38 STAD TCGA-BR-8373-01A 21 11 Out-of-frame Intra-chr q31.3 q31.3 Seq+ 104062 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIB1-GREB1L MIB1 chr18 21779685 + GREB1L chr18 21508118 + Exonic hg38 STAD TCGA-BR-8373-01A 22 5 Out-of-frame Intra-chr q11.2 q11.1 Seq+ 104063 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWP2-NFAT5 WWP2 chr16 69842120 + NFAT5 chr16 69626403 + Exonic hg38 STAD TCGA-BR-8373-01A 16 9 Out-of-frame Intra-chr q22.1 q22.1 Transcription factor Seq+ 104064 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCEA3-HMGCL TCEA3 chr1 23417249 - HMGCL chr1 23826183 - Exonic hg38 STAD TCGA-BR-8373-01A 17 3 5'UTR-5'UTR Intra-chr p36.11 Seq+ 104065 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMTM7-GPD1L CMTM7 chr3 32392065 + GPD1L chr3 32128076 + Exonic hg38 STAD TCGA-BR-8373-01A 16 2 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 104066 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCC3-TMEM104 ABCC3 chr17 50634981 + TMEM104 chr17 74819750 + Exonic hg38 STAD TCGA-BR-8373-01A 12 3 In-Frame Intra-chr q21.33 q25.1 104067 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACVR1B-ANKRD33 ACVR1B chr12 51981199 + ANKRD33 chr12 51888568 + Exonic hg38 STAD TCGA-BR-8373-01A 8 6 In-Frame Intra-chr q13.13 Oncogene q13.13 Seq+ 104068 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC5A1-YWHAH SLC5A1 chr22 32104891 + YWHAH chr22 31956139 + Exonic hg38 STAD TCGA-BR-8382-01A 3 2 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 104069 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLDN18-ARHGAP26 CLDN18 chr3 138031105 + ARHGAP26 chr5 143014080 + Exonic hg38 STAD TCGA-BR-8384-01A 3 4 In-Frame Inter-chr q22.3 q31.3 KB Pub Seq+ 104070 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACACA-RARA ACACA chr17 37330173 - RARA chr17 40330857 + Exonic hg38 STAD TCGA-BR-8483-01A 984 702 5'UTR-5'UTR Intra-chr q21.2 Oncogene Transcription factor Seq+ 104071 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGAP3-TOP2A PGAP3 chr17 39687834 - TOP2A chr17 40400663 - Exonic hg38 STAD TCGA-BR-8483-01A 118 78 Out-of-frame Intra-chr q12 Oncogene q21.2 Seq+ 104072 ChimerSeq TCGA FAWG TCGA_RNA-Seq TADA2A-NT5C3B TADA2A chr17 37470532 + NT5C3B chr17 41832477 - Exonic hg38 STAD TCGA-BR-8483-01A 10 11 3'UTR-3'UTR Intra-chr q12 q21.2 Seq+ 104073 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSDE1-ST7L CSDE1 chr1 114736758 - ST7L chr1 112578417 - Exonic hg38 STAD TCGA-BR-8483-01A 7 3 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 104074 ChimerSeq TCGA FAWG TCGA_RNA-Seq FKBP10-ERBB2 FKBP10 chr17 41813279 + ERBB2 chr17 39699537 + Exonic hg38 STAD TCGA-BR-8483-01A 1 14 CDS-5'UTR Intra-chr q21.2 q12 Oncogene 104075 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF1-CDK14 SMURF1 chr7 99060599 - CDK14 chr7 91045897 + Exonic hg38 STAD TCGA-BR-8484-01A 281 172 Out-of-frame Intra-chr q21.13 Seq+ 104076 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRRAP-ANKIB1 TRRAP chr7 98985044 + ANKIB1 chr7 92294889 + Exonic hg38 STAD TCGA-BR-8484-01A 36 25 CDS-5'UTR Intra-chr q22.1 Atypical:PIKK Oncogene q21.2 Seq+ 104077 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCGF3-HTT PCGF3 chr4 744688 + HTT chr4 3134401 + Exonic hg38 STAD TCGA-BR-8484-01A 18 16 In-Frame Intra-chr p16.3 p16.3 Seq+ 104078 ChimerSeq TCGA FAWG TCGA_RNA-Seq PNPLA2-EPS8L2 PNPLA2 chr11 822606 + EPS8L2 chr11 720062 + Exonic hg38 STAD TCGA-BR-8485-01A 30 22 In-Frame Intra-chr p15.5 p15.5 Seq+ 104079 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAB39-GBF1 CAB39 chr2 230713230 + GBF1 chr10 102365397 + Exonic hg38 STAD TCGA-BR-8485-01A 17 17 5'UTR-CDS Inter-chr q37.1 q24.32 Seq+ 104080 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPD52-ZNF704 TPD52 chr8 80171425 - ZNF704 chr8 80643129 - Exonic hg38 STAD TCGA-BR-8485-01A 12 24 Out-of-frame Intra-chr q21.13 q21.13 Transcription factor Seq+ 104081 ChimerSeq TCGA FAWG TCGA_RNA-Seq FLNB-GON4L FLNB chr3 58008856 + GON4L chr1 155767541 - Exonic hg38 STAD TCGA-BR-8485-01A 8 8 Out-of-frame Inter-chr p14.3 q22 Seq+ 104082 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGHG1-COL4A1 IGHG1 chr14 105742341 - COL4A1 chr13 110198631 - Exonic hg38 STAD TCGA-BR-8485-01A 2 21 Out-of-frame Inter-chr q32.33 q34 Seq+ 104083 ChimerSeq TCGA FAWG TCGA_RNA-Seq ILF3-C19orf38 ILF3 chr19 10655123 + C19orf38 chr19 10848441 + Exonic hg38 STAD TCGA-BR-8485-01A 5 5 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 104084 ChimerSeq TCGA FAWG TCGA_RNA-Seq FANCA-ANKRD11 FANCA chr16 89746584 - ANKRD11 chr16 89418368 - Exonic hg38 STAD TCGA-BR-8485-01A 4 3 CDS-5'UTR Intra-chr q24.3 Oncogene q24.3 Seq+ 104085 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP3D1-ABHD17A AP3D1 chr19 2115233 - ABHD17A chr19 1881914 - Exonic hg38 STAD TCGA-BR-8485-01A 3 4 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 104086 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK12-IKZF3 CDK12 chr17 39517556 + IKZF3 chr17 39757965 - Exonic hg38 STAD TCGA-BR-8590-01A 46 36 CDS-3'UTR Intra-chr q12 Oncogene q21.1 Tumor suppressor gene Transcription factor Seq+ 104087 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC12A2-MEGF10 SLC12A2 chr5 128151396 + MEGF10 chr5 127454566 + Exonic hg38 STAD TCGA-BR-8590-01A 34 26 In-Frame Intra-chr q23.3 q23.2 Seq+ 104088 ChimerSeq TCGA FAWG TCGA_RNA-Seq NACA-R3HDM2 NACA chr12 56724452 - R3HDM2 chr12 57295507 - Exonic hg38 STAD TCGA-BR-8590-01A 23 52 Out-of-frame Intra-chr q13.3 q13.3 Seq+ 104089 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASZ1-MTOR CASZ1 chr1 10705492 - MTOR chr1 11228918 - Exonic hg38 STAD TCGA-BR-8590-01A 29 17 5'UTR-CDS Intra-chr p36.22 Transcription factor p36.22 Oncogene Seq+ 104090 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSE1-CDH13 GSE1 chr16 85613398 + CDH13 chr16 83486477 + Exonic hg38 STAD TCGA-BR-8590-01A 28 12 In-Frame Intra-chr q24.1 q23.3 Tumor suppressor gene Seq+ 104091 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4-SHISA5 MAP4 chr3 47857431 - SHISA5 chr3 48501293 - Exonic hg38 STAD TCGA-BR-8590-01A 22 13 In-Frame Intra-chr p21.31 p21.31 Seq+ 104092 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSTYK-NUCKS1 DSTYK chr1 205211271 - NUCKS1 chr1 205729621 - Exonic hg38 STAD TCGA-BR-8590-01A 11 16 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 104093 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMPR2-SPATS2L BMPR2 chr2 202467689 + SPATS2L chr2 200412311 + Exonic hg38 STAD TCGA-BR-8590-01A 12 9 3'UTR-CDS Intra-chr q33.1 TKL:STKR Tumor suppressor gene q33.1 Seq+ 104094 ChimerSeq TCGA FAWG TCGA_RNA-Seq PYGB-KIZ PYGB chr20 25294292 + KIZ chr20 21214535 + Exonic hg38 STAD TCGA-BR-8590-01A 11 8 Out-of-frame Intra-chr p11.21 p11.23 104095 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCC3-ACSF2 ABCC3 chr17 50634981 + ACSF2 chr17 50471028 + Exonic hg38 STAD TCGA-BR-8590-01A 7 16 In-Frame Intra-chr q21.33 q21.33 Seq+ 104096 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXK2-RNF213 FOXK2 chr17 82520307 + RNF213 chr17 80287815 + Exonic hg38 STAD TCGA-BR-8590-01A 9 6 Out-of-frame Intra-chr q25.3 Transcription factor q25.3 Oncogene Seq+ 104097 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCI-GPR160 PRKCI chr3 170268000 + GPR160 chr3 170079774 + Exonic hg38 STAD TCGA-BR-8590-01A 8 10 CDS-5'UTR Intra-chr q26.2 q26.2 Seq+ 104098 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFEMP2-C6orf132 EFEMP2 chr11 65869857 - C6orf132 chr6 42128778 - Exonic hg38 STAD TCGA-BR-8590-01A 8 6 In-Frame Inter-chr q13.1 p21.1 Seq+ 104099 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUCKS1-CNTN2 NUCKS1 chr1 205749957 - CNTN2 chr1 205071947 + Exonic hg38 STAD TCGA-BR-8590-01A 9 1 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 104100 ChimerSeq TCGA FAWG TCGA_RNA-Seq PMF1-SYT11 PMF1 chr1 156213176 + SYT11 chr1 155880500 + Exonic hg38 STAD TCGA-BR-8590-01A 7 9 Out-of-frame Intra-chr q22 q22 Seq+ 104101 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCBP2-STAT3 PCBP2 chr12 53456001 + STAT3 chr17 42331531 - Exonic hg38 STAD TCGA-BR-8590-01A 7 6 Out-of-frame Inter-chr q13.13 q21.2 Oncogene Tumor suppressor gene Transcription factor Seq+ 104102 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOL10-ROCK2 NOL10 chr2 10684567 - ROCK2 chr2 11183440 - Exonic hg38 STAD TCGA-BR-8590-01A 7 5 Out-of-frame Intra-chr p25.1 p25.1 AGC:DMPK Seq+ 104103 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF2P1-EFCAB5 SMURF2P1 chr17 30610942 + EFCAB5 chr17 30107834 + Exonic hg38 STAD TCGA-BR-8590-01A 7 5 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 104104 ChimerSeq TCGA FAWG TCGA_RNA-Seq OTX1-EHBP1 OTX1 chr2 63054198 + EHBP1 chr2 62979188 + Exonic hg38 STAD TCGA-BR-8590-01A 5 9 In-Frame Intra-chr p15 Transcription factor p15 Seq+ 104105 ChimerSeq TCGA FAWG TCGA_RNA-Seq PACS1-FAM32A PACS1 chr11 66070842 + FAM32A chr19 16185624 + Exonic hg38 STAD TCGA-BR-8590-01A 5 9 In-Frame Inter-chr q13.1 p13.11 Seq+ 104106 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM37-DNAH17 TRIM37 chr17 59084002 - DNAH17 chr17 78445680 - Exonic hg38 STAD TCGA-BR-8590-01A 5 6 In-Frame Intra-chr q22 q25.3 Seq+ 104107 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXTL3-MIDN EXTL3 chr8 28622810 + MIDN chr19 1251562 + Exonic hg38 STAD TCGA-BR-8590-01A 4 6 5'UTR-CDS Inter-chr p21.1 Tumor suppressor gene p13.3 Seq+ 104108 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHMP1A-FANCA CHMP1A chr16 89653904 - FANCA chr16 89767237 - Exonic hg38 STAD TCGA-BR-8590-01A 2 9 Out-of-frame Intra-chr q24.3 q24.3 Oncogene Seq+ 104109 ChimerSeq TCGA FAWG TCGA_RNA-Seq LARP1B-SLC25A31 LARP1B chr4 128107313 + SLC25A31 chr4 127744672 + Exonic hg38 STAD TCGA-BR-8590-01A 2 8 In-Frame Intra-chr q28.2 q28.1 Seq+ 104110 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID3A-TEX38 ARID3A chr19 960164 + TEX38 chr1 46673024 + Exonic hg38 STAD TCGA-BR-8677-01A 7 4 CDS-5'UTR Inter-chr p13.3 Transcription factor p33 Seq+ 104111 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAF3-SIVA1 TRAF3 chr14 102777675 + SIVA1 chr14 104766790 + Exonic hg38 STAD TCGA-BR-8677-01A 3 8 5'UTR-3'UTR Intra-chr q32.32 q32.33 104112 ChimerSeq TCGA FAWG TCGA_RNA-Seq C4orf19-TBC1D1 C4orf19 chr4 37558076 + TBC1D1 chr4 38035588 + Exonic hg38 STAD TCGA-BR-8677-01A 3 3 5'UTR-CDS Intra-chr p14 p14 Seq+ 104113 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK1-ANKRD29 ROCK1 chr18 21110818 - ANKRD29 chr18 23649193 - Exonic hg38 STAD TCGA-BR-8677-01A 2 5 In-Frame Intra-chr q11.1 AGC:DMPK q11.2 Seq+ 104114 ChimerSeq TCGA FAWG TCGA_RNA-Seq NKD1-ADCY7 NKD1 chr16 50549555 + ADCY7 chr16 50287912 + Exonic hg38 STAD TCGA-BR-8678-01A 92 87 CDS-5'UTR Intra-chr q12.1 q12.1 Seq+ 104115 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM20B-RALGPS2 FAM20B chr1 179054638 + RALGPS2 chr1 178877498 + Exonic hg38 STAD TCGA-BR-8678-01A 91 76 In-Frame Intra-chr q25.2 q25.2 Seq+ 104116 ChimerSeq TCGA FAWG TCGA_RNA-Seq URI1-PLEKHF1 URI1 chr19 29986417 + PLEKHF1 chr19 29673824 + Exonic hg38 STAD TCGA-BR-8678-01A 67 38 5'UTR-5'UTR Intra-chr q12 q12 Seq+ 104117 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD2-NAT8L NSD2 chr4 1930770 + NAT8L chr4 2060998 + Exonic hg38 STAD TCGA-BR-8678-01A 67 35 In-Frame Intra-chr p16.3 p16.3 104118 ChimerSeq TCGA FAWG TCGA_RNA-Seq IP6K1-TRAIP IP6K1 chr3 49786354 - TRAIP chr3 49848200 - Exonic hg38 STAD TCGA-BR-8678-01A 29 10 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 104119 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPECC1L-SMARCB1 SPECC1L chr22 24270983 + SMARCB1 chr22 23791756 + Exonic hg38 STAD TCGA-BR-8678-01A 19 21 5'UTR-3'UTR Intra-chr q11.23 q11.23 Oncogene Tumor suppressor gene Seq+ 104120 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAP2-DAXX TAP2 chr6 32832333 - DAXX chr6 33324030 - Exonic hg38 STAD TCGA-BR-8678-01A 16 11 5'UTR-5'UTR Intra-chr Oncogene Seq+ 104121 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDFY2-FOXO1 WDFY2 chr13 51584824 + FOXO1 chr13 40560860 - Exonic hg38 STAD TCGA-BR-8678-01A 15 14 Out-of-frame Intra-chr q14.3 q14.11 Oncogene Tumor suppressor gene Transcription factor Seq+ 104122 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPP7-EXD3 DPP7 chr9 137113865 - EXD3 chr9 137324143 - Exonic hg38 STAD TCGA-BR-8678-01A 8 6 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 104123 ChimerSeq TCGA FAWG TCGA_RNA-Seq RECQL5-UNC13D RECQL5 chr17 75658298 - UNC13D chr17 75843266 - Exonic hg38 STAD TCGA-BR-8678-01A 6 11 In-Frame Intra-chr q25.1 q25.1 Seq+ 104124 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITPR2-RAD17 ITPR2 chr12 26400128 - RAD17 chr5 69410493 + Exonic hg38 STAD TCGA-BR-8678-01A 7 5 CDS-3'UTR Inter-chr p11.23 Seq+ 104125 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASC3-TMEM99 CASC3 chr17 40141607 + TMEM99 chr17 40833115 + Exonic hg38 STAD TCGA-BR-A44U-01A 25 19 CDS-5'UTR Intra-chr q21.1 q21.2 Seq+ 104126 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPF2-ORMDL3 WIPF2 chr17 40219492 + ORMDL3 chr17 39924220 - Exonic hg38 STAD TCGA-BR-A44U-01A 5 15 5'UTR-5'UTR Intra-chr q21.2 q21.1 Seq+ 104127 ChimerSeq TCGA FAWG TCGA_RNA-Seq TESC-FBXO21 TESC chr12 117046559 - FBXO21 chr12 117146277 - Exonic hg38 STAD TCGA-BR-A452-01A 80 33 Out-of-frame Intra-chr q24.22 q24.22 Seq+ 104128 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLA2-VPS51 POLA2 chr11 65267609 + VPS51 chr11 65111125 + Exonic hg38 STAD TCGA-BR-A452-01A 47 21 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 104129 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAM9-LETM2 ADAM9 chr8 38997160 + LETM2 chr8 38387950 + Exonic hg38 STAD TCGA-BR-A452-01A 20 4 3'UTR-5'UTR Intra-chr p11.23 Seq+ 104130 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPKAPK5-ALDH2 MAPKAPK5 chr12 111880527 + ALDH2 chr12 111781918 + Exonic hg38 STAD TCGA-BR-A452-01A 19 6 In-Frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 Seq+ 104131 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHTF18-RHOT2 CHTF18 chr16 791967 + RHOT2 chr16 668670 + Exonic hg38 STAD TCGA-BR-A452-01A 13 4 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 104132 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP1-CKAP5 ARHGAP1 chr11 46688173 - CKAP5 chr11 46770982 - Exonic hg38 STAD TCGA-BR-A452-01A 12 5 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 104133 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD2-SCAP SETD2 chr3 47097955 - SCAP chr3 47443091 - Exonic hg38 STAD TCGA-BR-A4CR-01A 40 10 CDS-5'UTR Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Seq+ 104134 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM49B-PSKH2 FAM49B chr8 129862229 - PSKH2 chr8 86074171 - Exonic hg38 STAD TCGA-BR-A4CR-01A 35 10 5'UTR-5'UTR Intra-chr q24.21 q21.3 CAMK:PSK Seq+ 104135 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP11A-ULK4 ATP11A chr13 112875941 + ULK4 chr3 41789843 - Exonic hg38 STAD TCGA-BR-A4CR-01A 33 11 In-Frame Inter-chr q34 p22.1 Other:ULK Seq+ 104136 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASAP1-RIMS2 ASAP1 chr8 130358017 - RIMS2 chr8 104093471 + Exonic hg38 STAD TCGA-BR-A4CR-01A 22 7 In-Frame Intra-chr q24.22 q22.3 Seq+ 104137 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRBP1-RPL23AP47 RRBP1 chr20 17641797 - RPL23AP47 chr6 170745518 + Exonic hg38 STAD TCGA-BR-A4CR-01A 20 1 Out-of-frame Inter-chr p12.1 q27 104138 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR1D-RPL21 POLR1D chr13 27648453 + RPL21 chr13 27253765 + Exonic hg38 STAD TCGA-BR-A4J1-01A 25 1 CDS-5'UTR Intra-chr q12.2 q12.2 104139 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASIC2-CASC8 ASIC2 chr17 33291408 - CASC8 chr8 127290060 - Exonic hg38 STAD TCGA-BR-A4J1-01A 13 13 CDS-3'UTR Inter-chr q12 q24.21 104140 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCAT1-THRA1/BTR CCAT1 chr8 127218810 - THRA1/BTR chr17 48307331 + Exonic hg38 STAD TCGA-BR-A4J1-01A 13 4 3'UTR-5'UTR Inter-chr q24.21 q21.32 104141 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMC1A-HUWE1 SMC1A chrX 53377951 - HUWE1 chrX 53532752 - Exonic hg38 STAD TCGA-BR-A4J1-01A 11 8 Out-of-frame Intra-chr p11.22 p11.22 104142 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL5-TRPM5 OSBPL5 chr11 3104193 - TRPM5 chr11 2406091 - Exonic hg38 STAD TCGA-BR-A4J4-01A 9 4 In-Frame Intra-chr p15.4 p15.5 Seq+ 104143 ChimerSeq TCGA FAWG TCGA_RNA-Seq LTA4H-SLC25A24 LTA4H chr12 96009094 - SLC25A24 chr1 108143710 - Exonic hg38 STAD TCGA-BR-A4J6-01A 17 0 CDS-5'UTR Inter-chr q23.1 Seq+ 104144 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND2C-BCL2L15 DENND2C chr1 114618386 - BCL2L15 chr1 113886658 - Exonic hg38 STAD TCGA-BR-A4J6-01A 12 2 In-Frame Intra-chr p13.2 p13.2 104145 ChimerSeq TCGA FAWG TCGA_RNA-Seq R3HCC1-ENTPD4 R3HCC1 chr8 23289153 + ENTPD4 chr8 23386045 - Exonic hg38 STAD TCGA-BR-A4PE-01A 124 23 CDS-3'UTR Intra-chr p21.3 p21.3 Seq+ 104146 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC2-ALDH1A1 DNAJC2 chr7 103344559 - ALDH1A1 chr9 72931019 - Exonic hg38 STAD TCGA-BR-A4PE-01A 71 14 Out-of-frame Inter-chr q22.1 q21.13 Seq+ 104147 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPINT1-SERP1 SPINT1 chr15 40845029 + SERP1 chr3 150567106 - Exonic hg38 STAD TCGA-BR-A4PE-01A 37 5 CDS-5'UTR Inter-chr q15.1 q25.1 Seq+ 104148 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRSF3-PTCHD4 SRSF3 chr6 36598983 + PTCHD4 chr6 48009114 - Exonic hg38 STAD TCGA-BR-A4PE-01A 17 3 Out-of-frame Intra-chr p21.31 p12.3 Seq+ 104149 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS8-RERGL EPS8 chr12 15789161 - RERGL chr12 18088956 - Exonic hg38 STAD TCGA-BR-A4PF-01A 152 45 5'UTR-CDS Intra-chr p12.3 p12.3 Seq+ 104150 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHA5-RERGL PLEKHA5 chr12 19132450 + RERGL chr12 18088956 - Exonic hg38 STAD TCGA-BR-A4PF-01A 76 16 Out-of-frame Intra-chr p12.3 p12.3 Seq+ 104151 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAR2-NFE2 FAR2 chr12 29321924 + NFE2 chr12 54295304 - Exonic hg38 STAD TCGA-BR-A4PF-01A 38 15 CDS-5'UTR Intra-chr p11.22 q13.13 Transcription factor Seq+ 104152 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2A3-ZZEF1 ATP2A3 chr17 3964174 - ZZEF1 chr17 4096700 - Exonic hg38 STAD TCGA-BR-A4PF-01A 31 4 In-Frame Intra-chr p13.2 p13.2 Seq+ 104153 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFE2-C12orf60 NFE2 chr12 54292229 - C12orf60 chr12 14904007 + Exonic hg38 STAD TCGA-BR-A4PF-01A 24 9 Out-of-frame Intra-chr q13.13 Transcription factor p12.3 Seq+ 104154 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPD-WNT3 CPD chr17 30385236 + WNT3 chr17 46773909 - Exonic hg38 STAD TCGA-CD-5799-01A 30 6 5'UTR-5'UTR Intra-chr q11.2 Tumor suppressor gene Seq+ 104155 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACACA-LGALS9 ACACA chr17 37270751 - LGALS9 chr17 27638263 + Exonic hg38 STAD TCGA-CD-5799-01A 24 4 5'UTR-5'UTR Intra-chr q11.2 Seq+ 104156 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPD-ERBB2 CPD chr17 30379514 + ERBB2 chr17 39719358 + Exonic hg38 STAD TCGA-CD-5799-01A 21 3 Out-of-frame Intra-chr q11.2 Tumor suppressor gene q12 Oncogene Seq+ 104157 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3D-MLLT1 RAB3D chr19 11335447 - MLLT1 chr19 6227102 - Exonic hg38 STAD TCGA-CD-5800-01A 41 1 Out-of-frame Intra-chr p13.2 p13.3 Seq+ 104158 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNB1-NADK GNB1 chr1 1890820 - NADK chr1 1765446 - Exonic hg38 STAD TCGA-CD-5800-01A 36 3 5'UTR-5'UTR Intra-chr p36.33 p36.33 Seq+ 104159 ChimerSeq TCGA FAWG TCGA_RNA-Seq TYK2-KEAP1 TYK2 chr19 10379615 - KEAP1 chr19 10500080 - Exonic hg38 STAD TCGA-CD-5800-01A 17 2 5'UTR-5'UTR Intra-chr p13.2 TK:JakA p13.2 Oncogene Seq+ 104160 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD2-CFAP99 NSD2 chr4 1871542 + CFAP99 chr4 2458723 + Exonic hg38 STAD TCGA-CD-5800-01A 16 2 5'UTR-CDS Intra-chr p16.3 p16.3 104161 ChimerSeq TCGA FAWG TCGA_RNA-Seq TULP4-AHCYL1 TULP4 chr6 158232303 + AHCYL1 chr1 110018552 + Exonic hg38 STAD TCGA-CD-5803-01A 16 0 5'UTR-CDS Inter-chr q25.3 p13.3 Tumor suppressor gene 104162 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM242-TIAM2 TMEM242 chr6 157318782 - TIAM2 chr6 154907730 + Exonic hg38 STAD TCGA-CD-5803-01A 9 1 CDS-5'UTR Intra-chr q25.3 q25.2 Seq+ 104163 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP48-WNT4 USP48 chr1 21736446 - WNT4 chr1 22121576 - Exonic hg38 STAD TCGA-CD-5804-01A 11 3 In-Frame Intra-chr p36.12 p36.12 Seq+ 104164 ChimerSeq TCGA FAWG TCGA_RNA-Seq HPCAL1-CYS1 HPCAL1 chr2 10303177 + CYS1 chr2 10065956 - Exonic hg38 STAD TCGA-CD-5813-01A 14 1 5'UTR-CDS Intra-chr p25.1 p25.1 Seq+ 104165 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5421060 - RNF216 chr7 5641376 - Exonic hg38 STAD TCGA-CD-8524-01A 52 28 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 104166 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD11-ERGIC2 ANKRD11 chr16 89490245 - ERGIC2 chr12 29371670 - Exonic hg38 STAD TCGA-CD-8524-01A 39 57 5'UTR-5'UTR Inter-chr q24.3 p11.22 Seq+ 104167 ChimerSeq TCGA FAWG TCGA_RNA-Seq B3GLCT-MRPS35 B3GLCT chr13 31215100 + MRPS35 chr12 27719808 + Exonic hg38 STAD TCGA-CD-8524-01A 32 7 In-Frame Inter-chr q12.3 p11.22 104168 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARL5A-IL1B ARL5A chr2 151812357 - IL1B chr2 112836244 - Exonic hg38 STAD TCGA-CD-8524-01A 13 16 CDS-5'UTR Intra-chr q23.3 q14.1 Seq+ 104169 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLK1-XPO7 TLK1 chr2 171160290 - XPO7 chr8 21966857 + Exonic hg38 STAD TCGA-CD-8524-01A 16 4 Out-of-frame Inter-chr q31.1 Other:TLK p21.3 Seq+ 104170 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYB5B-SSPN CYB5B chr16 69424857 + SSPN chr12 26252868 + Exonic hg38 STAD TCGA-CD-8524-01A 11 2 CDS-3'UTR Inter-chr q22.1 p12.1 104171 ChimerSeq TCGA FAWG TCGA_RNA-Seq OLFM2-EIF3G OLFM2 chr19 9936304 - EIF3G chr19 10116074 - Exonic hg38 STAD TCGA-CD-8525-01A 32 12 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 104172 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM60A-MADCAM1 FAM60A chr12 31326024 - MADCAM1 chr19 501669 + Exonic hg38 STAD TCGA-CD-8525-01A 10 16 Out-of-frame Inter-chr p13.3 Seq+ 104173 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAA60-CLDN9 NAA60 chr16 3458181 + CLDN9 chr16 3014299 + Exonic hg38 STAD TCGA-CD-8525-01A 9 5 5'UTR-3'UTR Intra-chr p13.3 p13.3 Seq+ 104174 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC88C-PPP4R3A CCDC88C chr14 91408659 - PPP4R3A chr14 91462877 - Exonic hg38 STAD TCGA-CD-8525-01A 7 4 In-Frame Intra-chr q32.12 q32.12 104175 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLASRP-PVR CLASRP chr19 45070104 + PVR chr19 44653900 + Exonic hg38 STAD TCGA-CD-8525-01A 7 4 In-Frame Intra-chr q13.32 q13.31 Seq+ 104176 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS37B-SPTBN1 VPS37B chr12 122895952 - SPTBN1 chr2 54526372 + Exonic hg38 STAD TCGA-CD-8525-01A 7 3 CDS-5'UTR Inter-chr q24.31 p16.2 Tumor suppressor gene Seq+ 104177 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFYC-ST3GAL3 NFYC chr1 40691867 + ST3GAL3 chr1 43894383 + Exonic hg38 STAD TCGA-CD-8525-01A 5 5 5'UTR-5'UTR Intra-chr p34.2 Transcription factor p34.1 Seq+ 104178 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAPSS2-ATAD1 PAPSS2 chr10 87660008 + ATAD1 chr10 87756922 - Exonic hg38 STAD TCGA-CD-8525-01A 4 5 In-Frame Intra-chr q23.2 Seq+ 104179 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIB1-ANKRD29 MIB1 chr18 21705123 + ANKRD29 chr18 23601309 - Exonic hg38 STAD TCGA-CD-8526-01A 36 8 5'UTR-CDS Intra-chr q11.2 q11.2 Seq+ 104180 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPS1-SPPL3 CPS1 chr2 210595582 + SPPL3 chr12 120810886 - Exonic hg38 STAD TCGA-CD-8526-01A 35 11 Out-of-frame Inter-chr q34 q24.31 Seq+ 104181 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPPL3-CPS1 SPPL3 chr12 120903845 - CPS1 chr2 210556719 + Exonic hg38 STAD TCGA-CD-8526-01A 33 14 Out-of-frame Inter-chr q24.31 q34 Seq+ 104182 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLK-ANKDD1B POLK chr5 75552591 + ANKDD1B chr5 75653142 + Exonic hg38 STAD TCGA-CD-8526-01A 13 4 In-Frame Intra-chr q13.3 q13.3 Seq+ 104183 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGRN1-C16orf96 MGRN1 chr16 4625048 + C16orf96 chr16 4594351 + Exonic hg38 STAD TCGA-CD-8527-01A 20 3 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 104184 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS6KA3-BMX RPS6KA3 chrX 20266564 - BMX chrX 15508345 + Exonic hg38 STAD TCGA-CD-8527-01A 15 8 CDS-5'UTR Intra-chr p22.12 p22.2 TK:Tec Seq+ 104185 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOC3L-PLCE1 NOC3L chr10 94362830 - PLCE1 chr10 94327968 + Exonic hg38 STAD TCGA-CD-8527-01A 14 2 CDS-3'UTR Intra-chr q23.33 q23.33 Tumor suppressor gene Seq+ 104186 ChimerSeq TCGA FAWG TCGA_RNA-Seq HAGH-ZNF598 HAGH chr16 1819897 - ZNF598 chr16 1998585 - Exonic hg38 STAD TCGA-CD-8527-01A 13 5 In-Frame Intra-chr p13.3 p13.3 Transcription factor Seq+ 104187 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMTK3-DBP LMTK3 chr19 48491108 - DBP chr19 48631052 - Exonic hg38 STAD TCGA-CD-8527-01A 9 3 CDS-5'UTR Intra-chr q13.33 q13.33 Transcription factor Seq+ 104188 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-QRSL1 PVT1 chr8 127794734 + QRSL1 chr6 106662980 + Exonic hg38 STAD TCGA-CD-8528-01A 3738 14741 5'UTR-CDS Inter-chr q24.21 q21 Seq+ 104189 ChimerSeq TCGA FAWG TCGA_RNA-Seq QRSL1-CD24 QRSL1 chr6 106629705 + CD24 chr6 106971834 - Exonic hg38 STAD TCGA-CD-8528-01A 3249 1981 In-Frame Intra-chr q21 q21 Seq+ 104190 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIR1204-QRSL1 MIR1204 chr8 127796008 + QRSL1 chr6 106662980 + Exonic hg38 STAD TCGA-CD-8528-01A 3128 2123 5'UTR-CDS Inter-chr q24.21 q21 104191 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2Q2P2-WDR72 UBE2Q2P2 chr15 82355374 + WDR72 chr15 53733161 - Exonic hg38 STAD TCGA-CD-8528-01A 298 10 3'UTR-3'UTR Intra-chr q21.3 104192 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG5-CASC8 ATG5 chr6 106201972 - CASC8 chr8 127323154 - Exonic hg38 STAD TCGA-CD-8528-01A 146 99 3'UTR-3'UTR Inter-chr q21 q24.21 Seq+ 104193 ChimerSeq TCGA FAWG TCGA_RNA-Seq OCLN-ARHGAP26 OCLN chr5 69514109 + ARHGAP26 chr5 143014080 + Exonic hg38 STAD TCGA-CD-8528-01A 75 28 In-Frame Intra-chr q13.2 q31.3 Seq+ 104194 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLTM-EPB42 SLTM chr15 58932356 - EPB42 chr15 43131142 - Exonic hg38 STAD TCGA-CD-8528-01A 18 20 3'UTR-3'UTR Intra-chr q22.1 q15.2 Seq+ 104195 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFL1-GLDN EFL1 chr15 82130377 - GLDN chr15 51394835 + Exonic hg38 STAD TCGA-CD-8528-01A 16 7 In-Frame Intra-chr q25.2 q21.2 104196 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP26-CAST ARHGAP26 chr5 142932125 + CAST chr5 96675539 + Exonic hg38 STAD TCGA-CD-8528-01A 16 6 In-Frame Intra-chr q31.3 q15 Seq+ 104197 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGF1R-EFL1 IGF1R chr15 98708107 + EFL1 chr15 82163984 - Exonic hg38 STAD TCGA-CD-8528-01A 5 7 In-Frame Intra-chr q26.3 TK:InsR Oncogene q25.2 104198 ChimerSeq TCGA FAWG TCGA_RNA-Seq GART-IGHG2 GART chr21 33517489 - IGHG2 chr14 105644789 - Exonic hg38 STAD TCGA-CD-8529-01A 200 98 Out-of-frame Inter-chr Seq+ 104199 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLC1-APOPT1 KLC1 chr14 103629494 + APOPT1 chr14 103590181 + Exonic hg38 STAD TCGA-CD-8529-01A 29 11 Out-of-frame Intra-chr q32.33 q32.33 Seq+ 104200 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1671-HTR1E KIAA1671 chr22 25181823 + HTR1E chr6 87015150 + Exonic hg38 STAD TCGA-CD-8529-01A 23 2 CDS-5'UTR Inter-chr q11.23 q14.3 Seq+ 104201 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-QRSL1 PVT1 chr8 127794734 + QRSL1 chr6 106662980 + Exonic hg38 STAD TCGA-CD-8529-01A 16 9 5'UTR-CDS Inter-chr q24.21 q21 Seq+ 104202 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-FADD PPFIA1 chr11 70272436 + FADD chr11 70206133 + Exonic hg38 STAD TCGA-CD-8529-01A 13 2 Out-of-frame Intra-chr q13.3 q13.3 Tumor suppressor gene Seq+ 104203 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCBP4-RPL29 PCBP4 chr3 51967326 - RPL29 chr3 51995902 - Exonic hg38 STAD TCGA-CD-8529-01A 9 14 5'UTR-5'UTR Intra-chr p21.2 p21.2 Seq+ 104204 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMG1-MYH11 SMG1 chr16 18877131 - MYH11 chr16 15838269 - Exonic hg38 STAD TCGA-CD-8529-01A 3 1 CDS-5'UTR Intra-chr p12.3 Atypical:PIKK Oncogene Seq+ 104205 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4K5-NIN MAP4K5 chr14 50504800 - NIN chr14 50743529 - Exonic hg38 STAD TCGA-CD-8530-01A 10 0 Out-of-frame Intra-chr q22.1 q22.1 Oncogene Seq+ 104206 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIST1H4I-BCL6 HIST1H4I chr6 27139330 + BCL6 chr3 187734907 - Exonic hg38 STAD TCGA-CD-8531-01A 195 6 CDS-5'UTR Inter-chr p22.1 q27.3 Oncogene Transcription factor Seq+ 104207 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCHSD2-ZNF705E FCHSD2 chr11 73140031 - ZNF705E chr11 71821547 - Exonic hg38 STAD TCGA-CD-8531-01A 23 5 CDS-5'UTR Intra-chr q13.4 q13.4 Transcription factor Seq+ 104208 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIP2B-PRELID1 DIP2B chr12 50505024 + PRELID1 chr5 177303832 + Exonic hg38 STAD TCGA-CD-8531-01A 13 0 Out-of-frame Inter-chr q13.12 q35.3 Seq+ 104209 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAP1A-ABCD3 RAP1A chr1 111619934 + ABCD3 chr1 94458607 + Exonic hg38 STAD TCGA-CD-8532-01A 9 5 5'UTR-CDS Intra-chr p13.2 Tumor suppressor gene p21.3 Seq+ 104210 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSH2-EPCAM MSH2 chr2 47416429 + EPCAM chr2 47385166 + Exonic hg38 STAD TCGA-CD-8533-01A 31 24 Out-of-frame Intra-chr p21 Oncogene Tumor suppressor gene p21 Seq+ 104211 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBA2-FUCA2 UBA2 chr19 34438766 + FUCA2 chr6 143497497 - Exonic hg38 STAD TCGA-CD-8533-01A 11 4 In-Frame Inter-chr q13.11 q24.2 Seq+ 104212 ChimerSeq TCGA FAWG TCGA_RNA-Seq INSR-S1PR2 INSR chr19 7267345 - S1PR2 chr19 10224947 - Exonic hg38 STAD TCGA-CD-8533-01A 7 9 CDS-5'UTR Intra-chr p13.2 TK:InsR p13.2 Seq+ 104213 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-MIR4300HG SHANK2 chr11 71224697 - MIR4300HG chr11 82100207 - Exonic hg38 STAD TCGA-CD-8533-01A 8 4 5'UTR-3'UTR Intra-chr q13.4 q14.1 104214 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF18-INSR ARHGEF18 chr19 7395247 + INSR chr19 7267896 - Exonic hg38 STAD TCGA-CD-8533-01A 1 1 5'UTR-CDS Intra-chr p13.2 p13.2 TK:InsR Seq+ 104215 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF168-SMCO1 RNF168 chr3 196502873 - SMCO1 chr3 196508331 - Exonic hg38 STAD TCGA-CD-8535-01A 154 65 Out-of-frame Intra-chr q29 q29 Seq+ 104216 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC12A2-PDHA1 SLC12A2 chr5 128084710 + PDHA1 chrX 19349312 + Exonic hg38 STAD TCGA-CD-8535-01A 37 20 In-Frame Inter-chr q23.3 p22.12 Seq+ 104217 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL5-MRGPRE OSBPL5 chr11 3119547 - MRGPRE chr11 3228860 - Exonic hg38 STAD TCGA-CD-8535-01A 35 16 CDS-5'UTR Intra-chr p15.4 p15.4 Seq+ 104218 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLTA-RIN2 CLTA chr9 36205692 + RIN2 chr20 20000747 + Exonic hg38 STAD TCGA-CD-8535-01A 28 38 Out-of-frame Inter-chr p13.3 p11.23 Seq+ 104219 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2E-KANSL1 KMT2E chr7 105041023 + KANSL1 chr17 46172232 - Exonic hg38 STAD TCGA-CD-8535-01A 35 7 CDS-5'UTR Inter-chr q22.3 Seq+ 104220 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNB2-RNF111 CCNB2 chr15 59117368 + RNF111 chr15 59094783 + Exonic hg38 STAD TCGA-CD-8535-01A 26 19 Out-of-frame Intra-chr q22.2 q22.1 Tumor suppressor gene Seq+ 104221 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM131A-HTR3D FAM131A chr3 184337371 + HTR3D chr3 184035057 + Exonic hg38 STAD TCGA-CD-8535-01A 16 14 5'UTR-5'UTR Intra-chr q27.1 q27.1 Seq+ 104222 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC5L-HSP90AB1 CDC5L chr6 44408632 + HSP90AB1 chr6 44248630 + Exonic hg38 STAD TCGA-CD-8535-01A 11 6 3'UTR-5'UTR Intra-chr p21.1 Transcription factor p21.1 Oncogene Seq+ 104223 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF19-PSORS1C1 TCF19 chr6 31159707 + PSORS1C1 chr6 31139641 + Exonic hg38 STAD TCGA-CD-8535-01A 10 8 3'UTR-3'UTR Intra-chr Seq+ 104224 ChimerSeq TCGA FAWG TCGA_RNA-Seq KMT2E-MAPT KMT2E chr7 105066807 + MAPT chr17 45962321 + Exonic hg38 STAD TCGA-CD-8535-01A 10 4 CDS-3'UTR Inter-chr q22.3 Seq+ 104225 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASZ1-C1orf127 CASZ1 chr1 10796564 - C1orf127 chr1 10970068 - Exonic hg38 STAD TCGA-CD-8535-01A 10 2 5'UTR-5'UTR Intra-chr p36.22 Transcription factor p36.22 Seq+ 104226 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP8A1-PDS5A ATP8A1 chr4 42549013 - PDS5A chr4 39863459 - Exonic hg38 STAD TCGA-CD-8536-01A 21 14 In-Frame Intra-chr p13 p14 Seq+ 104227 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT1-PRRX2 CNOT1 chr16 58585338 - PRRX2 chr9 129719231 + Exonic hg38 STAD TCGA-CD-A487-01A 49 19 Out-of-frame Inter-chr q21 q34.11 Transcription factor Seq+ 104228 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF20-PLPPR1 RNF20 chr9 101535552 + PLPPR1 chr9 101269880 + Exonic hg38 STAD TCGA-CD-A487-01A 17 0 CDS-3'UTR Intra-chr q31.1 q31.1 104229 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS12-PPA2 INTS12 chr4 105708638 - PPA2 chr4 105456745 - Exonic hg38 STAD TCGA-CD-A487-01A 15 0 5'UTR-CDS Intra-chr q24 q24 Seq+ 104230 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF169-POLD3 RNF169 chr11 74817714 + POLD3 chr11 74668777 + Exonic hg38 STAD TCGA-CD-A487-01A 12 3 CDS-3'UTR Intra-chr q13.4 q13.4 Seq+ 104231 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC7A6-TANGO6 SLC7A6 chr16 68275249 + TANGO6 chr16 68974028 + Exonic hg38 STAD TCGA-CD-A487-01A 9 6 In-Frame Intra-chr q22.1 q22.1 Seq+ 104232 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB8OS-SYNC ZBTB8OS chr1 32650433 - SYNC chr1 32684382 - Exonic hg38 STAD TCGA-CD-A487-01A 7 4 Out-of-frame Intra-chr p35.1 p35.1 Seq+ 104233 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP31-GGA2 USP31 chr16 23072045 - GGA2 chr16 23488709 - Exonic hg38 STAD TCGA-CD-A487-01A 6 5 In-Frame Intra-chr p12.2 p12.2 Seq+ 104234 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGCR2-CLTCL1 DGCR2 chr22 19056986 - CLTCL1 chr22 19275830 - Exonic hg38 STAD TCGA-CD-A489-01A 8 1 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 104235 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBBP8-DSCAS RBBP8 chr18 23006432 + DSCAS chr18 31103123 + Exonic hg38 STAD TCGA-CD-A48A-01A 16 6 CDS-5'UTR Intra-chr q11.2 Tumor suppressor gene q12.1 104236 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM193A-HTT FAM193A chr4 2700544 + HTT chr4 3188951 + Exonic hg38 STAD TCGA-CD-A48A-01A 13 3 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 104237 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANXA2-SLC51A ANXA2 chr15 60360941 - SLC51A chr3 196232419 + Exonic hg38 STAD TCGA-CG-4437-01A 99 0 In-Frame Inter-chr q22.2 q29 104238 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKL5-SUV39H1 CDKL5 chrX 18425695 + SUV39H1 chrX 48706265 + Exonic hg38 STAD TCGA-CG-4437-01A 10 0 5'UTR-CDS Intra-chr p22.13 CMGC:CDKL p11.23 Seq+ 104239 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK19-AMD1 CDK19 chr6 110746126 - AMD1 chr6 110888857 + Exonic hg38 STAD TCGA-CG-4441-01A 166 8 Out-of-frame Intra-chr q21 q21 Seq+ 104240 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRC2B-POMT1 PRRC2B chr9 131394263 + POMT1 chr9 131506403 + Exonic hg38 STAD TCGA-CG-4441-01A 35 1 5'UTR-5'UTR Intra-chr q34.13 q34.13 Seq+ 104241 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC30A5-MRPS36 SLC30A5 chr5 69115407 + MRPS36 chr5 69226338 + Exonic hg38 STAD TCGA-CG-4441-01A 25 0 CDS-3'UTR Intra-chr q13.1 104242 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0232-TBC1D14 KIAA0232 chr4 6842204 + TBC1D14 chr4 6994184 + Exonic hg38 STAD TCGA-CG-4441-01A 18 0 In-Frame Intra-chr p16.1 p16.1 Seq+ 104243 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICU1-DNAJB12 MICU1 chr10 72626010 - DNAJB12 chr10 72345127 - Exonic hg38 STAD TCGA-CG-4441-01A 16 0 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 104244 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM53B-2 FAM53B chr10 124681607 - 2 chr10 124448147 - Exonic hg38 STAD TCGA-CG-4441-01A 12 0 Out-of-frame Intra-chr q26.13 104245 ChimerSeq TCGA FAWG TCGA_RNA-Seq RCC1-IGHA1 RCC1 chr1 28506084 + IGHA1 chr14 105707431 - Exonic hg38 STAD TCGA-CG-5716-01A 27 0 Out-of-frame Inter-chr p35.3 Seq+ 104246 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNHG3-IGHA1 SNHG3 chr1 28506084 + IGHA1 chr14 105707431 - Exonic hg38 STAD TCGA-CG-5716-01A 27 0 Out-of-frame Inter-chr p35.3 Seq+ 104247 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOB2-MKL1 TOB2 chr22 41446379 - MKL1 chr22 40411907 - Exonic hg38 STAD TCGA-CG-5717-01A 23 1 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 104248 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2S3-PRDX4 EIF2S3 chrX 24060182 + PRDX4 chrX 23686285 + Exonic hg38 STAD TCGA-CG-5718-01A 34 0 Out-of-frame Intra-chr p22.11 p22.11 Seq+ 104249 ChimerSeq TCGA FAWG TCGA_RNA-Seq MGAT5-GPR39 MGAT5 chr2 134428439 + GPR39 chr2 132645101 + Exonic hg38 STAD TCGA-CG-5718-01A 15 1 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 104250 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGSM2-PTK6 SGSM2 chr17 2337745 + PTK6 chr20 63533704 - Exonic hg38 STAD TCGA-CG-5718-01A 10 2 In-Frame Inter-chr p13.3 Transcription factor q13.33 104251 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSH2-PIPOX SSH2 chr17 29929938 - PIPOX chr17 28953364 + Exonic hg38 STAD TCGA-CG-5718-01A 9 2 CDS-5'UTR Intra-chr q11.2 q11.2 104252 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM3D-EFHD2 FAM3D chr3 58666576 - EFHD2 chr1 15425871 + Exonic hg38 STAD TCGA-CG-5719-01A 46 4 5'UTR-CDS Inter-chr p14.2 p36.21 Seq+ 104253 ChimerSeq TCGA FAWG TCGA_RNA-Seq OXR1-CASC8 OXR1 chr8 106448048 + CASC8 chr8 127290060 - Exonic hg38 STAD TCGA-CG-5724-01A 92 1 CDS-3'UTR Intra-chr q23.1 q24.21 Seq+ 104254 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXNDC11-GSPT1 TXNDC11 chr16 11730645 - GSPT1 chr16 11877580 - Exonic hg38 STAD TCGA-CG-5725-01A 35 0 In-Frame Intra-chr p13.13 p13.13 Seq+ 104255 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL1A-FBRS OSBPL1A chr18 24377413 - FBRS chr16 30664715 + Exonic hg38 STAD TCGA-CG-5725-01A 33 1 In-Frame Inter-chr q11.2 p11.2 Seq+ 104256 ChimerSeq TCGA FAWG TCGA_RNA-Seq HS2ST1-STRIP1 HS2ST1 chr1 86915160 + STRIP1 chr1 110037891 + Exonic hg38 STAD TCGA-CG-5725-01A 14 0 Out-of-frame Intra-chr p22.3 p13.3 104257 ChimerSeq TCGA FAWG TCGA_RNA-Seq TP53-SLC35G6 TP53 chr17 7674859 - SLC35G6 chr17 7481988 + Exonic hg38 STAD TCGA-CG-5725-01A 14 0 CDS-3'UTR Intra-chr p13.1 Oncogene Tumor suppressor gene Transcription factor 104258 ChimerSeq TCGA FAWG TCGA_RNA-Seq OCLN-RAD17 OCLN chr5 69504294 + RAD17 chr5 69414031 + Exonic hg38 STAD TCGA-CG-5732-01A 12 3 CDS-3'UTR Intra-chr q13.2 Seq+ 104259 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZHX3-VSTM2L ZHX3 chr20 41238688 - VSTM2L chr20 37931635 + Exonic hg38 STAD TCGA-CG-5732-01A 9 3 5'UTR-CDS Intra-chr q12 Transcription factor q11.23 104260 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB20-MYO16 RAB20 chr13 110561348 - MYO16 chr13 108957688 + Exonic hg38 STAD TCGA-D7-6518-01A 26 1 Out-of-frame Intra-chr q34 Seq+ 104261 ChimerSeq TCGA FAWG TCGA_RNA-Seq F11R-NECTIN4 F11R chr1 161021010 - NECTIN4 chr1 161079949 - Exonic hg38 STAD TCGA-D7-6519-01A 40 4 In-Frame Intra-chr q23.3 q23.3 104262 ChimerSeq TCGA FAWG TCGA_RNA-Seq TULP4-WDR27 TULP4 chr6 158461729 + WDR27 chr6 169457634 - Exonic hg38 STAD TCGA-D7-6520-01A 42 0 In-Frame Intra-chr q25.3 q27 Seq+ 104263 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF14-MEOX2 PHF14 chr7 10990847 + MEOX2 chr7 15612611 - Exonic hg38 STAD TCGA-D7-6521-01A 31 5 Out-of-frame Intra-chr p21.3 p21.2 Transcription factor Seq+ 104264 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK1E-FAM227A CSNK1E chr22 38314082 - FAM227A chr22 38586199 - Exonic hg38 STAD TCGA-D7-6526-01A 31 0 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 104265 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRCP-RELN CRCP chr7 66152474 + RELN chr7 103523531 - Exonic hg38 STAD TCGA-D7-6526-01A 16 0 5'UTR-CDS Intra-chr q11.21 q22.1 Seq+ 104266 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM1-NKAIN1 PUM1 chr1 30974651 - NKAIN1 chr1 31188187 - Exonic hg38 STAD TCGA-D7-6527-01A 181 10 In-Frame Intra-chr p35.2 p35.2 Seq+ 104267 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDCD6IP-GADL1 PDCD6IP chr3 33828969 + GADL1 chr3 30728415 - Exonic hg38 STAD TCGA-D7-6527-01A 111 2 In-Frame Intra-chr p22.3 p23 Seq+ 104268 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF257-ARIH2 ZNF257 chr19 22052635 + ARIH2 chr3 48979482 + Exonic hg38 STAD TCGA-D7-6527-01A 110 0 Out-of-frame Inter-chr p12 Transcription factor p21.31 Seq+ 104269 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLK1-ORC2 CLK1 chr2 200864564 - ORC2 chr2 200913992 - Exonic hg38 STAD TCGA-D7-6527-01A 92 0 5'UTR-CDS Intra-chr q33.1 CMGC:CLK q33.1 Seq+ 104270 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR2J-DNAJC2 POLR2J chr7 102478811 - DNAJC2 chr7 103324562 - Exonic hg38 STAD TCGA-D7-6527-01A 80 1 In-Frame Intra-chr q22.1 q22.1 104271 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBP1-EIF3K UBP1 chr3 33439736 - EIF3K chr19 38620337 + Exonic hg38 STAD TCGA-D7-6527-01A 45 3 CDS-3'UTR Inter-chr p22.3 Transcription factor Seq+ 104272 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF15-PDK3 TAF15 chr17 35809576 + PDK3 chrX 24531657 + Exonic hg38 STAD TCGA-D7-6527-01A 41 0 3'UTR-CDS Inter-chr q12 p22.11 Seq+ 104273 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPARGC1B-TCOF1 PPARGC1B chr5 149730420 + TCOF1 chr5 150361156 + Exonic hg38 STAD TCGA-D7-6527-01A 35 4 In-Frame Intra-chr q32 q32 Seq+ 104274 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAF1-YWHAG PAF1 chr19 39390069 - YWHAG chr7 76358824 - Exonic hg38 STAD TCGA-D7-6527-01A 31 0 CDS-5'UTR Inter-chr q13.2 q11.23 Seq+ 104275 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCAPG2-ORC5 NCAPG2 chr7 158704724 - ORC5 chr7 104136893 - Exonic hg38 STAD TCGA-D7-6527-01A 23 0 5'UTR-CDS Intra-chr q36.3 q22.2 Seq+ 104276 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRN2-DNAJC2 PTPRN2 chr7 158587558 - DNAJC2 chr7 103313101 - Exonic hg38 STAD TCGA-D7-6527-01A 22 3 In-Frame Intra-chr q36.3 q22.1 Seq+ 104277 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC2-ZNF385D DNAJC2 chr7 103337736 - ZNF385D chr3 21665028 - Exonic hg38 STAD TCGA-D7-6527-01A 20 1 In-Frame Inter-chr q22.1 p24.3 Transcription factor Seq+ 104278 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYRIP-BABAM1 MYRIP chr3 39809916 + BABAM1 chr19 17273904 + Exonic hg38 STAD TCGA-D7-6527-01A 18 0 5'UTR-CDS Inter-chr p22.1 p13.11 Seq+ 104279 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX6-BAZ1A SNX6 chr14 34593045 - BAZ1A chr14 34774490 - Exonic hg38 STAD TCGA-D7-6527-01A 18 0 In-Frame Intra-chr q13.1 q13.2 Seq+ 104280 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK1A1-MYO15B CSNK1A1 chr5 149550075 - MYO15B chr17 75610166 + Exonic hg38 STAD TCGA-D7-6527-01A 17 0 In-Frame Inter-chr q32 Tumor suppressor gene q25.1 Seq+ 104281 ChimerSeq TCGA FAWG TCGA_RNA-Seq PNPLA7-EXD3 PNPLA7 chr9 137497187 - EXD3 chr9 137324143 - Exonic hg38 STAD TCGA-D7-6527-01A 16 0 In-Frame Intra-chr q34.3 q34.3 Seq+ 104282 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARD3-ARHGAP12 PARD3 chr10 34814876 - ARHGAP12 chr10 31843586 - Exonic hg38 STAD TCGA-D7-6528-01A 29 1 In-Frame Intra-chr p11.21 p11.22 Seq+ 104283 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZKSCAN4-SLC44A4 ZKSCAN4 chr6 28248067 - SLC44A4 chr6 31866126 - Exonic hg38 STAD TCGA-D7-6815-01A 133 8 CDS-5'UTR Intra-chr p22.1 Transcription factor Seq+ 104284 ChimerSeq TCGA FAWG TCGA_RNA-Seq LASP1-WIPF2 LASP1 chr17 38898519 + WIPF2 chr17 40256391 + Exonic hg38 STAD TCGA-D7-6815-01A 22 2 5'UTR-5'UTR Intra-chr q12 q21.2 Seq+ 104285 ChimerSeq TCGA FAWG TCGA_RNA-Seq AATF-UBE2G1 AATF chr17 36953907 + UBE2G1 chr17 4307123 - Exonic hg38 STAD TCGA-D7-6815-01A 19 0 3'UTR-CDS Intra-chr p13.2 Seq+ 104286 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0753-CCDC92B KIAA0753 chr17 6620788 - CCDC92B chr17 2725000 - Exonic hg38 STAD TCGA-D7-6817-01A 14 0 In-Frame Intra-chr p13.1 p13.3 104287 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTOV1-CA10 PTOV1 chr19 49858653 + CA10 chr17 51747818 - Exonic hg38 STAD TCGA-D7-6818-01A 90 4 In-Frame Inter-chr q13.33 q22 Seq+ 104288 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGKV1OR10-IGKJ4 IGKV1OR10 chr10 42185790 + IGKJ4 chr2 88860921 - Exonic hg38 STAD TCGA-D7-6818-01A 67 0 Out-of-frame Inter-chr p11.2 104289 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD13-OR4G4P PSMD13 chr11 247448 + OR4G4P chr1 53282 + Exonic hg38 STAD TCGA-D7-6818-01A 44 1 Out-of-frame Inter-chr p15.5 Seq+ 104290 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP1-NAA35 AGAP1 chr2 235750488 + NAA35 chr9 85996399 + Exonic hg38 STAD TCGA-D7-6818-01A 36 0 In-Frame Inter-chr q37.2 q21.33 Seq+ 104291 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC42EP4-AMZ2 CDC42EP4 chr17 73311893 - AMZ2 chr17 68248640 + Exonic hg38 STAD TCGA-D7-6820-01A 222 20 5'UTR-5'UTR Intra-chr q25.1 q24.2 Seq+ 104292 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM1-KANSL1 PUM1 chr1 31059204 - KANSL1 chr17 46067667 - Exonic hg38 STAD TCGA-D7-6822-01A 91 0 CDS-5'UTR Inter-chr p35.2 Seq+ 104293 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTCH1-FANCC PTCH1 chr9 95476034 - FANCC chr9 95117390 - Exonic hg38 STAD TCGA-D7-6822-01A 60 0 In-Frame Intra-chr q22.32 Oncogene Tumor suppressor gene q22.32 Oncogene Seq+ 104294 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKI-FAF1 SKI chr1 2229735 + FAF1 chr1 50801677 - Exonic hg38 STAD TCGA-D7-6822-01A 40 0 In-Frame Intra-chr p36.33 Transcription factor p32.3 Seq+ 104295 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAF1-SKI FAF1 chr1 50959767 - SKI chr1 2302978 + Exonic hg38 STAD TCGA-D7-6822-01A 27 0 In-Frame Intra-chr p32.3 p36.33 Transcription factor Seq+ 104296 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF111-CCNB2 RNF111 chr15 58988068 + CCNB2 chr15 59123517 + Exonic hg38 STAD TCGA-D7-8570-01A 59 22 5'UTR-CDS Intra-chr q22.1 Tumor suppressor gene q22.2 Seq+ 104297 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPF2-THRA WIPF2 chr17 40219492 + THRA chr17 40074192 + Exonic hg38 STAD TCGA-D7-8573-01A 40 22 5'UTR-5'UTR Intra-chr q21.2 q21.1 Tumor suppressor gene Transcription factor Seq+ 104298 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-WIPF2 ERBB2 chr17 39717480 + WIPF2 chr17 40256391 + Exonic hg38 STAD TCGA-D7-8573-01A 25 21 5'UTR-5'UTR Intra-chr q12 Oncogene q21.2 Seq+ 104299 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGAP3-PPP1R1B PGAP3 chr17 39674617 - PPP1R1B chr17 39627306 + Exonic hg38 STAD TCGA-D7-8573-01A 24 25 CDS-5'UTR Intra-chr q12 Oncogene q12 Tumor suppressor gene Seq+ 104300 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-IKZF3 ERBB2 chr17 39730263 + IKZF3 chr17 39792933 - Exonic hg38 STAD TCGA-D7-8573-01A 3 5 3'UTR-CDS Intra-chr q12 Oncogene q21.1 Tumor suppressor gene Transcription factor Seq+ 104301 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABHD17C-BHLHE41 ABHD17C chr15 80696019 + BHLHE41 chr12 26124582 - Exonic hg38 STAD TCGA-D7-8575-01A 17 14 In-Frame Inter-chr q25.1 p12.1 Tumor suppressor gene Transcription factor Seq+ 104302 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF2-CABP7 NF2 chr22 29604112 + CABP7 chr22 29729055 + Exonic hg38 STAD TCGA-D7-8575-01A 13 15 In-Frame Intra-chr q12.2 Oncogene Tumor suppressor gene q12.2 Seq+ 104303 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELF1-DCLK1 ELF1 chr13 41019228 - DCLK1 chr13 36126156 - Exonic hg38 STAD TCGA-D7-8576-01A 15 16 5'UTR-5'UTR Intra-chr q14.11 Transcription factor q13.3 CAMK:DCAMKL Seq+ 104304 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELF1-MTIF3 ELF1 chr13 41060838 - MTIF3 chr13 27445156 - Exonic hg38 STAD TCGA-D7-8576-01A 17 5 5'UTR-5'UTR Intra-chr q14.11 Transcription factor q12.2 Seq+ 104305 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLDN18-ARHGAP26 CLDN18 chr3 138031105 + ARHGAP26 chr5 143014080 + Exonic hg38 STAD TCGA-D7-8576-01A 16 7 In-Frame Inter-chr q22.3 q31.3 KB Pub Seq+ 104306 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK8-GTF2F2 CDK8 chr13 26337642 + GTF2F2 chr13 45283442 + Exonic hg38 STAD TCGA-D7-8576-01A 12 5 In-Frame Intra-chr q12.13 CMGC:CDK Oncogene q14.12 Seq+ 104307 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF18-INSR ARHGEF18 chr19 7395247 + INSR chr19 7267896 - Exonic hg38 STAD TCGA-D7-8576-01A 1 1 5'UTR-CDS Intra-chr p13.2 p13.2 TK:InsR Seq+ 104308 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM9SF2-IL17D TM9SF2 chr13 99554455 + IL17D chr13 20721636 + Exonic hg38 STAD TCGA-D7-8578-01A 17 2 In-Frame Intra-chr q32.3 q12.11 Seq+ 104309 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM9SF2-AS TM9SF2 chr13 99554455 + AS chr13 113475860 + Exonic hg38 STAD TCGA-D7-8578-01A 6 8 Out-of-frame Intra-chr q32.3 104310 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS4-TMEM25 TMPRSS4 chr11 118104820 + TMEM25 chr11 118533857 + Exonic hg38 STAD TCGA-D7-8579-01A 50 27 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 104311 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRN2-IMMP2L PTPRN2 chr7 158587558 - IMMP2L chr7 111521449 - Exonic hg38 STAD TCGA-D7-8579-01A 19 10 CDS-5'UTR Intra-chr q36.3 q31.1 Seq+ 104312 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLDN18-ARHGAP26 CLDN18 chr3 138031105 + ARHGAP26 chr5 143014080 + Exonic hg38 STAD TCGA-D7-8579-01A 19 2 In-Frame Inter-chr q22.3 q31.3 KB Pub Seq+ 104313 ChimerSeq TCGA FAWG TCGA_RNA-Seq VMP1-TBX4 VMP1 chr17 59738947 + TBX4 chr17 61456488 + Exonic hg38 STAD TCGA-D7-8579-01A 17 5 5'UTR-5'UTR Intra-chr q23.1 q23.2 Transcription factor Seq+ 104314 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP153-ZNF280D NUP153 chr6 17706277 - ZNF280D chr15 56693215 - Exonic hg38 STAD TCGA-D7-8579-01A 9 8 In-Frame Inter-chr p22.3 q21.3 Transcription factor Seq+ 104315 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIS3L2-EFHD1 DIS3L2 chr2 232210405 + EFHD1 chr2 232681585 + Exonic hg38 STAD TCGA-D7-A4YU-01A 22 9 Out-of-frame Intra-chr q37.1 q37.1 Seq+ 104316 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA3B-ALS2CR12 SEMA3B chr3 50271480 + ALS2CR12 chr2 201289785 - Exonic hg38 STAD TCGA-D7-A4YU-01A 22 7 Out-of-frame Inter-chr p21.31 Tumor suppressor gene q33.1 Seq+ 104317 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-RAB11FIP4 NF1 chr17 31095369 + RAB11FIP4 chr17 31431813 + Exonic hg38 STAD TCGA-D7-A4YU-01A 6 2 In-Frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Seq+ 104318 ChimerSeq TCGA FAWG TCGA_RNA-Seq GABRP-RANBP17 GABRP chr5 170789247 + RANBP17 chr5 170953597 + Exonic hg38 STAD TCGA-D7-A4YY-01A 346 112 In-Frame Intra-chr q35.1 q35.1 Seq+ 104319 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA6-RAPGEF4 ITGA6 chr2 172491523 + RAPGEF4 chr2 173033914 + Exonic hg38 STAD TCGA-D7-A4YY-01A 321 154 In-Frame Intra-chr q31.1 q31.1 Seq+ 104320 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP1M2-FBXL12 AP1M2 chr19 10578892 - FBXL12 chr19 9811717 - Exonic hg38 STAD TCGA-D7-A4YY-01A 62 30 In-Frame Intra-chr p13.2 p13.2 Seq+ 104321 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRIM2-COL22A1 PRIM2 chr6 57326045 + COL22A1 chr8 138737577 - Exonic hg38 STAD TCGA-D7-A4YY-01A 20 10 In-Frame Inter-chr p11.2 q24.3 Seq+ 104322 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND5B-FAM60A DENND5B chr12 31590706 - FAM60A chr12 31298224 - Exonic hg38 STAD TCGA-D7-A4YY-01A 21 4 Out-of-frame Intra-chr p11.21 Seq+ 104323 ChimerSeq TCGA FAWG TCGA_RNA-Seq XRCC6-SREBF2 XRCC6 chr22 41637791 + SREBF2 chr22 41866831 + Exonic hg38 STAD TCGA-D7-A4YY-01A 15 7 Out-of-frame Intra-chr q13.2 q13.2 Transcription factor Seq+ 104324 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF148-OSBPL11 ZNF148 chr3 125375102 - OSBPL11 chr3 125552679 - Exonic hg38 STAD TCGA-D7-A4YY-01A 11 4 5'UTR-CDS Intra-chr q21.2 Transcription factor q21.2 Seq+ 104325 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLDN18-ARHGAP6 CLDN18 chr3 138031105 + ARHGAP6 chrX 11254707 - Exonic hg38 STAD TCGA-D7-A4Z0-01A 36 9 In-Frame Inter-chr q22.3 p22.2 Seq+ 104326 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBB6-OSBPL1A TUBB6 chr18 12308795 + OSBPL1A chr18 24181279 - Exonic hg38 STAD TCGA-D7-A6EV-01A 34 7 Out-of-frame Intra-chr p11.21 q11.2 Seq+ 104327 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC8-RPS4X HDAC8 chrX 72462004 - RPS4X chrX 72256054 - Exonic hg38 STAD TCGA-D7-A6EX-01A 37 8 3'UTR-3'UTR Intra-chr q13.1 q13.1 Seq+ 104328 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK6-SEMA3D CDK6 chr7 92774696 - SEMA3D chr7 85055859 - Exonic hg38 STAD TCGA-D7-A6EX-01A 16 1 Out-of-frame Intra-chr q21.2 CMGC:CDK Oncogene Tumor suppressor gene q21.11 Seq+ 104329 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCLO-CDK14 PCLO chr7 82965771 - CDK14 chr7 90747681 + Exonic hg38 STAD TCGA-D7-A6EX-01A 12 2 In-Frame Intra-chr q21.11 q21.13 Seq+ 104330 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCKDHB-COQ3 BCKDHB chr6 80171390 + COQ3 chr6 99383824 - Exonic hg38 STAD TCGA-D7-A6EX-01A 4 6 In-Frame Intra-chr q14.1 q16.2 Seq+ 104331 ChimerSeq TCGA FAWG TCGA_RNA-Seq OPLAH-EEF1D OPLAH chr8 144055029 - EEF1D chr8 143590081 - Exonic hg38 STAD TCGA-D7-A6EY-01A 28 12 CDS-5'UTR Intra-chr q24.3 104332 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOA-PFKFB4 RHOA chr3 49411820 - PFKFB4 chr3 48550234 - Exonic hg38 STAD TCGA-D7-A6EY-01A 12 0 5'UTR-5'UTR Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 104333 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3GL1-DOHH SH3GL1 chr19 4400324 - DOHH chr19 3496886 - Exonic hg38 STAD TCGA-D7-A6EY-01A 11 4 CDS-5'UTR Intra-chr p13.3 p13.3 104334 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA3-MIB1 LAMA3 chr18 23689977 + MIB1 chr18 21853140 + Exonic hg38 STAD TCGA-D7-A6EY-01A 8 2 In-Frame Intra-chr q11.2 q11.2 104335 ChimerSeq TCGA FAWG TCGA_RNA-Seq CIRBP-ERAS CIRBP chr19 1269410 + ERAS chrX 48829081 + Exonic hg38 STAD TCGA-D7-A6EZ-01A 180 40 5'UTR-5'UTR Inter-chr p13.3 p11.23 Seq+ 104336 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSPAN14-IFIT1 TSPAN14 chr10 80468687 + IFIT1 chr10 89402281 + Exonic hg38 STAD TCGA-D7-A6EZ-01A 21 15 5'UTR-5'UTR Intra-chr q23.1 q23.31 Seq+ 104337 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAAHP1-RNF11 FAAHP1 chr1 46443037 + RNF11 chr1 51269956 + Exonic hg38 STAD TCGA-D7-A6EZ-01A 12 1 5'UTR-CDS Intra-chr p33 p32.3 104338 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENSA-CTSS ENSA chr1 150627467 - CTSS chr1 150755150 - Exonic hg38 STAD TCGA-D7-A6F0-01A 45 2 In-Frame Intra-chr q21.3 q21.3 Seq+ 104339 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRADD-MRPL42 CRADD chr12 93679072 + MRPL42 chr12 93501176 + Exonic hg38 STAD TCGA-D7-A6F0-01A 27 9 Out-of-frame Intra-chr q22 q22 Seq+ 104340 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6R3-RHOD PPP6R3 chr11 68505271 + RHOD chr11 67065896 + Exonic hg38 STAD TCGA-D7-A6F0-01A 24 20 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 104341 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4K3-CDKL4 MAP4K3 chr2 39378066 - CDKL4 chr2 39213472 - Exonic hg38 STAD TCGA-D7-A6F0-01A 25 4 Out-of-frame Intra-chr p22.1 p22.1 CMGC:CDKL Seq+ 104342 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP39-ELMOD3 USP39 chr2 85625691 + ELMOD3 chr2 85387098 + Exonic hg38 STAD TCGA-D7-A6F0-01A 17 0 5'UTR-5'UTR Intra-chr p11.2 p11.2 Seq+ 104343 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPINT2-ZNF607 SPINT2 chr19 38283797 + ZNF607 chr19 37711692 - Exonic hg38 STAD TCGA-D7-A6F0-01A 13 5 CDS-5'UTR Intra-chr q13.2 Tumor suppressor gene q13.12 Transcription factor Seq+ 104344 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB3IP-BEST3 RAB3IP chr12 69801721 + BEST3 chr12 69699349 - Exonic hg38 STAD TCGA-D7-A6F2-01A 12 7 CDS-5'UTR Intra-chr q15 q15 Seq+ 104345 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGS-PPP1R27 PIGS chr17 28554851 - PPP1R27 chr17 81834833 - Exonic hg38 STAD TCGA-D7-A748-01A 20 6 Out-of-frame Intra-chr q11.2 q25.3 104346 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC6-JUP CDC6 chr17 40303827 + JUP chr17 41757805 - Exonic hg38 STAD TCGA-EQ-8122-01A 1163 1331 Out-of-frame Intra-chr q21.2 q21.2 Tumor suppressor gene Seq+ 104347 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRR11-SKA2 PRR11 chr17 59155805 + SKA2 chr17 59131367 - Exonic hg38 STAD TCGA-EQ-8122-01A 41 0 5'UTR-CDS Intra-chr q22 q22 Seq+ 104348 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD3-MIEN1 STARD3 chr17 39653750 + MIEN1 chr17 39730291 - Exonic hg38 STAD TCGA-EQ-8122-01A 37 14 Out-of-frame Intra-chr q12 q12 Seq+ 104349 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAPGEFL1-GSDMA RAPGEFL1 chr17 40177109 + GSDMA chr17 39966311 + Exonic hg38 STAD TCGA-EQ-8122-01A 33 16 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 104350 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD3-CASC3 PSMD3 chr17 39990197 + CASC3 chr17 40161753 + Exonic hg38 STAD TCGA-EQ-8122-01A 24 9 In-Frame Intra-chr q21.1 q21.1 Seq+ 104351 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHBP1-CTNND2 EHBP1 chr2 62707295 + CTNND2 chr5 11732272 - Exonic hg38 STAD TCGA-EQ-8122-01A 20 3 Out-of-frame Inter-chr p15 p15.2 Seq+ 104352 ChimerSeq TCGA FAWG TCGA_RNA-Seq HAP1-WIPF2 HAP1 chr17 41731493 - WIPF2 chr17 40283272 + Exonic hg38 STAD TCGA-EQ-8122-01A 18 10 CDS-3'UTR Intra-chr q21.2 q21.2 Seq+ 104353 ChimerSeq TCGA FAWG TCGA_RNA-Seq HAP1-CDC6 HAP1 chr17 41731493 - CDC6 chr17 40289408 + Exonic hg38 STAD TCGA-EQ-8122-01A 12 10 CDS-3'UTR Intra-chr q21.2 q21.2 Seq+ 104354 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC6-CCR7 CDC6 chr17 40295456 + CCR7 chr17 40558942 - Exonic hg38 STAD TCGA-EQ-8122-01A 7 7 3'UTR-CDS Intra-chr q21.2 q21.2 Seq+ 104355 ChimerSeq TCGA FAWG TCGA_RNA-Seq APC-DTWD2 APC chr5 112828972 + DTWD2 chr5 118848218 - Exonic hg38 STAD TCGA-EQ-A4SO-01A 22 1 In-Frame Intra-chr q22.2 Oncogene Tumor suppressor gene q23.1 Seq+ 104356 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNPO2-HOOK2 TNPO2 chr19 12723249 - HOOK2 chr19 12774897 - Exonic hg38 STAD TCGA-F1-6875-01A 11 5 5'UTR-CDS Intra-chr p13.13 p13.13 Seq+ 104357 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACF1-FOXJ3 MACF1 chr1 39444835 + FOXJ3 chr1 42199230 - Exonic hg38 STAD TCGA-F1-A72C-01A 62 18 In-Frame Intra-chr p34.3 p34.2 Transcription factor Seq+ 104358 ChimerSeq TCGA FAWG TCGA_RNA-Seq VTI1A-TCF7L2 VTI1A chr10 112538330 + TCF7L2 chr10 113141184 + Exonic hg38 STAD TCGA-F1-A72C-01A 2 0 Out-of-frame Intra-chr q25.2 q25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 104359 ChimerSeq TCGA FAWG TCGA_RNA-Seq TET3-ANXA4 TET3 chr2 74003166 + ANXA4 chr2 69781520 + Exonic hg38 STAD TCGA-FP-7829-01A 17 3 CDS-5'UTR Intra-chr p13.1 Transcription factor p13.3 104360 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3PXD2A-HNF4A SH3PXD2A chr10 103855195 - HNF4A chr20 44424018 + Exonic hg38 STAD TCGA-FP-7829-01A 17 1 Out-of-frame Inter-chr q24.33 q13.12 Tumor suppressor gene Transcription factor 104361 ChimerSeq TCGA FAWG TCGA_RNA-Seq LYPD6-LY75 LYPD6 chr2 149437826 + LY75 chr2 159899059 - Exonic hg38 STAD TCGA-FP-7829-01A 6 2 In-Frame Intra-chr q23.2 q24.2 104362 ChimerSeq TCGA FAWG TCGA_RNA-Seq EYA3-TMEM61 EYA3 chr1 28088524 - TMEM61 chr1 54991836 + Exonic hg38 STAD TCGA-FP-7829-01A 5 4 5'UTR-CDS Intra-chr p35.3 p32.3 104363 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM107-FXR2 TMEM107 chr17 8176200 - FXR2 chr17 7606149 - Exonic hg38 STAD TCGA-FP-7829-01A 6 0 In-Frame Intra-chr p13.1 p13.1 104364 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMSB4X-IGHM TMSB4X chrX 12975168 + IGHM chr14 105856217 - Exonic hg38 STAD TCGA-FP-7916-01A 18 0 Out-of-frame Inter-chr p22.2 q32.33 104365 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC18-MYL4 TNRC18 chr7 5351819 - MYL4 chr17 47213799 + Exonic hg38 STAD TCGA-FP-7916-01A 10 4 Out-of-frame Inter-chr p22.1 q21.32 Seq+ 104366 ChimerSeq TCGA FAWG TCGA_RNA-Seq HECTD4-RPH3A HECTD4 chr12 112381952 - RPH3A chr12 112792143 + Exonic hg38 STAD TCGA-FP-7916-01A 5 8 CDS-5'UTR Intra-chr q24.13 q24.13 104367 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOOK3-GTF2E2 HOOK3 chr8 42943445 + GTF2E2 chr8 30635123 - Exonic hg38 STAD TCGA-FP-8099-01A 15 14 In-Frame Intra-chr p11.21 Oncogene p12 Seq+ 104368 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREB3L1-ATG13 CREB3L1 chr11 46278213 + ATG13 chr11 46630045 + Exonic hg38 STAD TCGA-FP-8099-01A 11 9 CDS-5'UTR Intra-chr p11.2 Tumor suppressor gene Transcription factor p11.2 Seq+ 104369 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2R2-ACO1 UBE2R2 chr9 33817934 + ACO1 chr9 32440465 + Exonic hg38 STAD TCGA-FP-8631-01A 38 27 In-Frame Intra-chr p13.3 p21.1 Seq+ 104370 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPH3-SLC29A3 HNRNPH3 chr10 68339555 + SLC29A3 chr10 71361954 + Exonic hg38 STAD TCGA-FP-8631-01A 35 27 Out-of-frame Intra-chr q21.3 q22.1 Seq+ 104371 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNA-LLGL2 PITPNA chr17 1548296 - LLGL2 chr17 75568476 + Exonic hg38 STAD TCGA-FP-8631-01A 23 11 In-Frame Intra-chr p13.3 q25.1 Seq+ 104372 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX9-ZDHHC14 SNX9 chr6 157896998 + ZDHHC14 chr6 157592988 + Exonic hg38 STAD TCGA-FP-8631-01A 19 11 In-Frame Intra-chr q25.3 q25.3 Seq+ 104373 ChimerSeq TCGA FAWG TCGA_RNA-Seq DZIP1L-NME9 DZIP1L chr3 138086961 - NME9 chr3 138303643 - Exonic hg38 STAD TCGA-FP-8631-01A 16 7 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 104374 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCAR1-MCU CCAR1 chr10 68754827 + MCU chr10 72834359 + Exonic hg38 STAD TCGA-FP-8631-01A 10 27 In-Frame Intra-chr q21.3 Tumor suppressor gene q22.1 Seq+ 104375 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAG3L5P-AP4M1 STAG3L5P chr7 100338889 + AP4M1 chr7 100105240 + Exonic hg38 STAD TCGA-FP-8631-01A 6 14 5'UTR-CDS Intra-chr q22.1 q22.1 104376 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNRF2-ARMC10 ZNRF2 chr7 30323737 + ARMC10 chr7 103083682 + Exonic hg38 STAD TCGA-FP-8631-01A 7 9 CDS-5'UTR Intra-chr p14.3 Tumor suppressor gene Seq+ 104377 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTPS1-NFYC CTPS1 chr1 41008714 + NFYC chr1 40747534 + Exonic hg38 STAD TCGA-FP-8631-01A 7 6 In-Frame Intra-chr p34.2 p34.2 Transcription factor Seq+ 104378 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIX-VDR NFIX chr19 13025552 + VDR chr12 47879115 - Exonic hg38 STAD TCGA-FP-8631-01A 6 7 In-Frame Inter-chr p13.13 Transcription factor q13.11 Tumor suppressor gene Transcription factor Seq+ 104379 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC27-SYT13 CDC27 chr17 47189146 - SYT13 chr11 45255891 - Exonic hg38 STAD TCGA-FP-8631-01A 4 13 In-Frame Inter-chr q21.32 p11.2 Tumor suppressor gene Seq+ 104380 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC9A8-PTGIS SLC9A8 chr20 49823141 + PTGIS chr20 49508064 - Exonic hg38 STAD TCGA-FP-8631-01A 6 3 Out-of-frame Intra-chr q13.13 q13.13 Seq+ 104381 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13D-MFN2 VPS13D chr1 12335827 + MFN2 chr1 12006538 + Exonic hg38 STAD TCGA-FP-8631-01A 5 6 Out-of-frame Intra-chr p36.22 p36.22 Seq+ 104382 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMT2-ADAMTS14 BMT2 chr7 112939591 - ADAMTS14 chr10 70729294 + Exonic hg38 STAD TCGA-FP-8631-01A 6 1 Out-of-frame Inter-chr q31.1 q22.1 104383 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITPR3-SYNGAP1 ITPR3 chr6 33678802 + SYNGAP1 chr6 33423477 + Exonic hg38 STAD TCGA-FP-8631-01A 4 7 CDS-3'UTR Intra-chr p21.31 Seq+ 104384 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAP1B-CSAD RAP1B chr12 68611052 + CSAD chr12 53161389 - Exonic hg38 STAD TCGA-FP-8631-01A 2 11 5'UTR-CDS Intra-chr q15 q13.13 Seq+ 104385 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBNO2-GAMT SBNO2 chr19 1154184 - GAMT chr19 1397499 - Exonic hg38 STAD TCGA-FP-8631-01A 4 3 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 104386 ChimerSeq TCGA FAWG TCGA_RNA-Seq NADK-TOM1L2 NADK chr1 1779905 - TOM1L2 chr17 17862848 - Exonic hg38 STAD TCGA-FP-8631-01A 3 6 5'UTR-CDS Inter-chr p36.33 p11.2 Tumor suppressor gene Seq+ 104387 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13C-HERC1 VPS13C chr15 61940647 - HERC1 chr15 63612556 - Exonic hg38 STAD TCGA-FP-8631-01A 3 5 In-Frame Intra-chr q22.2 q22.31 Seq+ 104388 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABR-YWHAE ABR chr17 1228793 - YWHAE chr17 1365058 - Exonic hg38 STAD TCGA-FP-8631-01A 3 1 5'UTR-5'UTR Intra-chr p13.3 p13.3 Seq+ 104389 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFP91-RPL5P29 ZFP91 chr11 58617568 + RPL5P29 chr11 56358028 + Exonic hg38 STAD TCGA-FP-A8CX-01A 53 18 Out-of-frame Intra-chr q12.1 Transcription factor Seq+ 104390 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAVER1-TMEM259 RAVER1 chr19 10328642 - TMEM259 chr19 1014473 - Exonic hg38 STAD TCGA-FP-A8CX-01A 35 14 In-Frame Intra-chr p13.2 p13.3 Seq+ 104391 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED24-TBC1D3K MED24 chr17 40053298 - TBC1D3K chr17 37925999 + Exonic hg38 STAD TCGA-FP-A8CX-01A 35 0 CDS-5'UTR Intra-chr q21.1 q12 104392 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPSF6-CLDN11 CPSF6 chr12 69239706 + CLDN11 chr3 170460299 + Exonic hg38 STAD TCGA-FP-A8CX-01A 27 6 CDS-3'UTR Inter-chr q15 q26.2 Seq+ 104393 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLDN11-MECOM CLDN11 chr3 170476873 + MECOM chr3 169381524 - Exonic hg38 STAD TCGA-FP-A8CX-01A 18 7 3'UTR-CDS Intra-chr q26.2 q26.2 Transcription factor Seq+ 104394 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRIQ4-MIEN1 LRRIQ4 chr3 169822941 + MIEN1 chr17 39730291 - Exonic hg38 STAD TCGA-FP-A8CX-01A 18 5 Out-of-frame Inter-chr q26.2 q12 Seq+ 104395 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCI-CLDN11 PRKCI chr3 170222770 + CLDN11 chr3 170476771 + Exonic hg38 STAD TCGA-FP-A8CX-01A 11 7 CDS-3'UTR Intra-chr q26.2 q26.2 Seq+ 104396 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR160-MED24 GPR160 chr3 170039043 + MED24 chr17 40053635 - Exonic hg38 STAD TCGA-FP-A8CX-01A 6 7 5'UTR-5'UTR Inter-chr q26.2 q21.1 Seq+ 104397 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCSER2-RGR CCSER2 chr10 84328808 + RGR chr10 84247641 + Exonic hg38 STAD TCGA-FP-A9TM-01A 10 2 5'UTR-CDS Intra-chr q23.1 q23.1 Seq+ 104398 ChimerSeq TCGA FAWG TCGA_RNA-Seq STRIP1-AHCYL1 STRIP1 chr1 110040703 + AHCYL1 chr1 110012387 + Exonic hg38 STAD TCGA-HF-7131-01A 38 1 Out-of-frame Intra-chr p13.3 p13.3 Tumor suppressor gene Seq+ 104399 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP3-MYO1D USP3 chr15 63537156 + MYO1D chr17 32494915 - Exonic hg38 STAD TCGA-HF-7131-01A 21 5 In-Frame Inter-chr q22.31 q11.2 Seq+ 104400 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF128-CXorf57 RNF128 chrX 106727397 + CXorf57 chrX 106662015 + Exonic hg38 STAD TCGA-HF-7131-01A 15 3 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 104401 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2J2-INTS11 UBE2J2 chr1 1264559 - INTS11 chr1 1313581 - Exonic hg38 STAD TCGA-HF-7131-01A 14 3 Out-of-frame Intra-chr p36.33 p36.33 104402 ChimerSeq TCGA FAWG TCGA_RNA-Seq OTULIN-FAM105A OTULIN chr5 14664977 + FAM105A chr5 14607330 + Exonic hg38 STAD TCGA-HF-7131-01A 9 1 Out-of-frame Intra-chr p15.2 p15.2 104403 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L1-CNBD2 EPB41L1 chr20 36112480 + CNBD2 chr20 35995038 + Exonic hg38 STAD TCGA-HF-7132-01A 15 15 5'UTR-5'UTR Intra-chr q11.23 q11.23 Seq+ 104404 ChimerSeq TCGA FAWG TCGA_RNA-Seq MFHAS1-ZFAT MFHAS1 chr8 8890061 - ZFAT chr8 134532972 - Exonic hg38 STAD TCGA-HF-7132-01A 14 7 3'UTR-3'UTR Intra-chr p23.1 q24.22 Transcription factor Seq+ 104405 ChimerSeq TCGA FAWG TCGA_RNA-Seq GP2-LYZ GP2 chr16 20311148 - LYZ chr12 69353773 + Exonic hg38 STAD TCGA-HF-7132-01A 10 20 Out-of-frame Inter-chr p12.3 q15 Seq+ 104406 ChimerSeq TCGA FAWG TCGA_RNA-Seq EDC3-CYP1A1 EDC3 chr15 74655733 - CYP1A1 chr15 74723126 - Exonic hg38 STAD TCGA-HF-7133-01A 11 2 CDS-5'UTR Intra-chr q24.1 q24.1 104407 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCF11-DDIAS PCF11 chr11 83171914 + DDIAS chr11 82930157 + Exonic hg38 STAD TCGA-HF-7133-01A 10 1 Out-of-frame Intra-chr q14.1 q14.1 104408 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNMT1-ZNF563 DNMT1 chr19 10162667 - ZNF563 chr19 12322711 - Exonic hg38 STAD TCGA-HF-7134-01A 10 3 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene Transcription factor p13.2 Transcription factor Seq+ 104409 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMCHD1-DLGAP1 SMCHD1 chr18 2674145 + DLGAP1 chr18 3742512 - Exonic hg38 STAD TCGA-HF-7136-01A 47 7 In-Frame Intra-chr p11.32 Tumor suppressor gene p11.31 104410 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP35-BAIAP2 ARHGAP35 chr19 46937408 + BAIAP2 chr17 81053668 + Exonic hg38 STAD TCGA-HF-7136-01A 29 4 Out-of-frame Inter-chr q13.32 Transcription factor q25.3 104411 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFYVE28-POLN ZFYVE28 chr4 2353933 - POLN chr4 2073029 - Exonic hg38 STAD TCGA-HF-A5NB-01A 62 19 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 104412 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDC1-PUM2 SDC1 chr2 20203087 - PUM2 chr2 20263460 - Exonic hg38 STAD TCGA-HF-A5NB-01A 31 5 In-Frame Intra-chr p24.1 p24.1 Seq+ 104413 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAMP1-ARSB SCAMP1 chr5 78450034 + ARSB chr5 78839426 - Exonic hg38 STAD TCGA-HF-A5NB-01A 21 4 In-Frame Intra-chr q14.1 q14.1 Seq+ 104414 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF3A-PDLIM4 KIF3A chr5 132737414 - PDLIM4 chr5 132262609 + Exonic hg38 STAD TCGA-HU-8238-01A 22 16 In-Frame Intra-chr q31.1 q31.1 Tumor suppressor gene Seq+ 104415 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP10-1562D12.1 USP10 chr16 84700111 + 1562D12.1 chr8 101461617 - Exonic hg38 STAD TCGA-HU-8238-01A 13 13 Out-of-frame Inter-chr q24.1 104416 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATA6-DPF1 GATA6 chr18 22172279 + DPF1 chr19 38222708 - Exonic hg38 STAD TCGA-HU-8243-01A 16 13 Out-of-frame Inter-chr q11.2 Transcription factor q13.2 Transcription factor Seq+ 104417 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM241-RIOK3 TMEM241 chr18 23421367 - RIOK3 chr18 23462964 + Exonic hg38 STAD TCGA-HU-8243-01A 5 8 Out-of-frame Intra-chr q11.2 q11.2 Atypical:RIO Seq+ 104418 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS8-A2M EPS8 chr12 15789161 - A2M chr12 9072871 - Exonic hg38 STAD TCGA-HU-8249-01A 13 1 5'UTR-CDS Intra-chr p12.3 p13.31 Seq+ 104419 ChimerSeq TCGA FAWG TCGA_RNA-Seq TGM2-COL4A1 TGM2 chr20 38142064 - COL4A1 chr13 110150444 - Exonic hg38 STAD TCGA-HU-8608-01A 1 9 In-Frame Inter-chr q11.23 q34 104420 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLK2-PPP1R12B CLK2 chr1 155273201 - PPP1R12B chr1 202488533 + Exonic hg38 STAD TCGA-HU-8610-01A 9 9 5'UTR-5'UTR Intra-chr q22 CMGC:CLK q32.1 Seq+ 104421 ChimerSeq TCGA FAWG TCGA_RNA-Seq LLGL2-ITGB4 LLGL2 chr17 75533705 + ITGB4 chr17 75752174 + Exonic hg38 STAD TCGA-HU-A4G3-01A 50 9 5'UTR-CDS Intra-chr q25.1 q25.1 Seq+ 104422 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIP5K1B-TJP2 PIP5K1B chr9 68742657 + TJP2 chr9 69212548 + Exonic hg38 STAD TCGA-HU-A4G3-01A 17 4 5'UTR-5'UTR Intra-chr q21.11 q21.11 Seq+ 104423 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC57-FASN CCDC57 chr17 82201538 - FASN chr17 82096452 - Exonic hg38 STAD TCGA-HU-A4G3-01A 14 2 CDS-5'UTR Intra-chr q25.3 q25.3 Seq+ 104424 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASC3-WIPF2 CASC3 chr17 40141607 + WIPF2 chr17 40256391 + Exonic hg38 STAD TCGA-HU-A4G6-01A 15 5 CDS-5'UTR Intra-chr q21.1 q21.2 Seq+ 104425 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTUS1-ASAH1 MTUS1 chr8 17743604 - ASAH1 chr8 18063230 - Exonic hg38 STAD TCGA-HU-A4GF-01A 57 23 In-Frame Intra-chr p22 Tumor suppressor gene p22 Seq+ 104426 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNRNP40-MAP2K5 SNRNP40 chr1 31289254 - MAP2K5 chr15 67748231 + Exonic hg38 STAD TCGA-HU-A4GF-01A 37 14 In-Frame Inter-chr p35.2 q23 STE:STE7 Seq+ 104427 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNRNP40-SPOCD1 SNRNP40 chr1 31281374 - SPOCD1 chr1 31801705 - Exonic hg38 STAD TCGA-HU-A4GF-01A 37 7 In-Frame Intra-chr p35.2 p35.2 Seq+ 104428 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP8-NTF6G ARHGAP8 chr22 44848050 + NTF6G chr19 49029817 + Exonic hg38 STAD TCGA-HU-A4GF-01A 36 7 Out-of-frame Inter-chr q13.31 q13.33 Seq+ 104429 ChimerSeq TCGA FAWG TCGA_RNA-Seq NTSR1-OSBPL2 NTSR1 chr20 62709921 + OSBPL2 chr20 62279157 + Exonic hg38 STAD TCGA-HU-A4GF-01A 13 1 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 104430 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPAST-MEMO1 SPAST chr2 32064246 + MEMO1 chr2 31943383 - Exonic hg38 STAD TCGA-HU-A4GF-01A 8 3 In-Frame Intra-chr p22.3 p22.3 Seq+ 104431 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC12A2-PPP2CA SLC12A2 chr5 128084710 + PPP2CA chr5 134202021 - Exonic hg38 STAD TCGA-HU-A4GH-01A 209 28 In-Frame Intra-chr q23.3 q31.1 Tumor suppressor gene Seq+ 104432 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM120A-WNK2 FAM120A chr9 93498886 + WNK2 chr9 93268627 + Exonic hg38 STAD TCGA-HU-A4GH-01A 92 13 In-Frame Intra-chr q22.31 q22.31 Tumor suppressor gene Seq+ 104433 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRD4-ZC3H15 BRD4 chr19 15332290 - ZC3H15 chr2 186502496 + Exonic hg38 STAD TCGA-HU-A4GH-01A 88 22 5'UTR-CDS Inter-chr p13.12 Atypical:BRD q32.1 Seq+ 104434 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1A-RPS6KA1 ARID1A chr1 26775707 + RPS6KA1 chr1 26571449 + Exonic hg38 STAD TCGA-HU-A4GH-01A 83 28 CDS-3'UTR Intra-chr p36.11 Oncogene Tumor suppressor gene Seq+ 104435 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCC3-XYLT2 ABCC3 chr17 50678219 + XYLT2 chr17 50358207 + Exonic hg38 STAD TCGA-HU-A4GH-01A 49 10 In-Frame Intra-chr q21.33 q21.33 Seq+ 104436 ChimerSeq TCGA FAWG TCGA_RNA-Seq DUS1L-ASPSCR1 DUS1L chr17 82063468 - ASPSCR1 chr17 81985507 + Exonic hg38 STAD TCGA-HU-A4GH-01A 39 17 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 104437 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD5-SRGAP3 SETD5 chr3 9429009 + SRGAP3 chr3 9064581 - Exonic hg38 STAD TCGA-HU-A4GH-01A 36 10 Out-of-frame Intra-chr p25.3 p25.3 Tumor suppressor gene Seq+ 104438 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP5-CHRM1 LRP5 chr11 68414012 + CHRM1 chr11 62911178 - Exonic hg38 STAD TCGA-HU-A4GH-01A 32 13 CDS-5'UTR Intra-chr q13.2 q12.3 Seq+ 104439 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2B4-CCNI ATP2B4 chr1 203627219 + CCNI chr4 77066405 - Exonic hg38 STAD TCGA-HU-A4GH-01A 33 6 5'UTR-5'UTR Inter-chr q32.1 q21.1 Seq+ 104440 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP5-SLC22A6 LRP5 chr11 68414012 + SLC22A6 chr11 62936486 - Exonic hg38 STAD TCGA-HU-A4GH-01A 22 4 CDS-3'UTR Intra-chr q13.2 q12.3 Seq+ 104441 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLDIP3-ARFGAP3 POLDIP3 chr22 42587506 - ARFGAP3 chr22 42808890 - Exonic hg38 STAD TCGA-HU-A4GH-01A 20 5 In-Frame Intra-chr q13.2 q13.2 Seq+ 104442 ChimerSeq TCGA FAWG TCGA_RNA-Seq CP-COMMD2 CP chr3 149177840 - COMMD2 chr3 149741718 - Exonic hg38 STAD TCGA-HU-A4GH-01A 18 4 In-Frame Intra-chr q25.1 q25.1 Seq+ 104443 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD11-RHOT1 PSMD11 chr17 32444614 + RHOT1 chr17 32253085 + Exonic hg38 STAD TCGA-HU-A4GH-01A 16 3 CDS-3'UTR Intra-chr q11.2 q11.2 Seq+ 104444 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYM-MYO5B DYM chr18 49460398 - MYO5B chr18 50055378 - Exonic hg38 STAD TCGA-HU-A4GH-01A 15 3 5'UTR-CDS Intra-chr q21.1 q21.1 Seq+ 104445 ChimerSeq TCGA FAWG TCGA_RNA-Seq LUC7L3-SPATA20 LUC7L3 chr17 50719831 + SPATA20 chr17 50554251 + Exonic hg38 STAD TCGA-HU-A4GH-01A 15 3 Out-of-frame Intra-chr q21.33 q21.33 Seq+ 104446 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALT1-RAF1 B4GALT1 chr9 33166758 - RAF1 chr3 12600415 - Exonic hg38 STAD TCGA-HU-A4GH-01A 15 1 Out-of-frame Inter-chr p21.1 p25.2 TKL:RAF Oncogene Seq+ 104447 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSSC1-SH3YL1 TSSC1 chr2 3214149 - SH3YL1 chr2 234272 - Exonic hg38 STAD TCGA-HU-A4GT-01A 12 4 Out-of-frame Intra-chr p25.3 p25.3 Seq+ 104448 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROCK2-ASAP2 ROCK2 chr2 11198491 - ASAP2 chr2 9279317 + Exonic hg38 STAD TCGA-HU-A4GU-01A 27 5 In-Frame Intra-chr p25.1 AGC:DMPK p25.1 Seq+ 104449 ChimerSeq TCGA FAWG TCGA_RNA-Seq RACGAP1-FAIM2 RACGAP1 chr12 50025398 - FAIM2 chr12 49903982 - Exonic hg38 STAD TCGA-HU-A4GU-01A 7 5 5'UTR-5'UTR Intra-chr q13.12 q13.12 Seq+ 104450 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTG1-ADGRA1 MTG1 chr10 133402773 + ADGRA1 chr10 133127233 + Exonic hg38 STAD TCGA-HU-A4H0-01A 25 2 In-Frame Intra-chr q26.3 q26.3 104451 ChimerSeq TCGA FAWG TCGA_RNA-Seq MFSD6-INPP1 MFSD6 chr2 190469855 + INPP1 chr2 190370905 + Exonic hg38 STAD TCGA-HU-A4H0-01A 13 3 Out-of-frame Intra-chr q32.2 q32.2 Seq+ 104452 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABHD12-1 ABHD12 chr20 25390513 - 1 chr6 11103762 - Exonic hg38 STAD TCGA-HU-A4H5-01A 49 10 CDS-3'UTR Inter-chr p11.21 104453 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYH14-NR1H2 MYH14 chr19 50217771 + NR1H2 chr19 50338002 + Exonic hg38 STAD TCGA-HU-A4H5-01A 41 6 CDS-5'UTR Intra-chr q13.33 q13.33 Transcription factor 104454 ChimerSeq TCGA FAWG TCGA_RNA-Seq APPL2-KCCAT198 APPL2 chr12 105203703 - KCCAT198 chr12 105326976 - Exonic hg38 STAD TCGA-HU-A4H5-01A 10 5 CDS-3'UTR Intra-chr q23.3 q23.3 104455 ChimerSeq TCGA FAWG TCGA_RNA-Seq FUS-TMEM114 FUS chr16 31185179 + TMEM114 chr16 8572224 - Exonic hg38 STAD TCGA-HU-A4HB-01A 71 35 Out-of-frame Intra-chr p11.2 Tumor suppressor gene p13.2 Seq+ 104456 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB7-PECAM1 GRB7 chr17 39738133 + PECAM1 chr17 64323845 - Exonic hg38 STAD TCGA-HU-A4HD-01A 436 212 5'UTR-CDS Intra-chr q12 q23.3 Seq+ 104457 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLDN7-UTS2R CLDN7 chr17 7260821 - UTS2R chr17 82374243 + Exonic hg38 STAD TCGA-HU-A4HD-01A 221 40 5'UTR-5'UTR Intra-chr p13.1 q25.3 Seq+ 104458 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDC4-TP53TG5 SDC4 chr20 45348325 - TP53TG5 chr20 45377613 - Exonic hg38 STAD TCGA-HU-A4HD-01A 181 93 In-Frame Intra-chr q13.12 q13.12 Seq+ 104459 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEX2-STARD3 TEX2 chr17 64193559 - STARD3 chr17 39657008 + Exonic hg38 STAD TCGA-HU-A4HD-01A 96 28 Out-of-frame Intra-chr q23.3 q12 Seq+ 104460 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSPG2-MYBPHL HSPG2 chr1 21895922 - MYBPHL chr1 109294249 - Exonic hg38 STAD TCGA-HU-A4HD-01A 92 8 In-Frame Intra-chr p36.12 p13.3 Seq+ 104461 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF4G3-C7orf50 EIF4G3 chr1 21050866 - C7orf50 chr7 1010143 - Exonic hg38 STAD TCGA-HU-A4HD-01A 89 18 5'UTR-CDS Inter-chr p36.12 p22.3 Seq+ 104462 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKD2-MYH14 PRKD2 chr19 46704169 - MYH14 chr19 50244242 + Exonic hg38 STAD TCGA-HU-A4HD-01A 80 15 In-Frame Intra-chr q13.32 q13.33 Seq+ 104463 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHPN2-ZNF677 RHPN2 chr19 33044249 - ZNF677 chr19 53243897 - Exonic hg38 STAD TCGA-HU-A4HD-01A 62 9 Out-of-frame Intra-chr q13.11 q13.42 Transcription factor Seq+ 104464 ChimerSeq TCGA FAWG TCGA_RNA-Seq PADI2-EXD3 PADI2 chr1 17095909 - EXD3 chr9 137324143 - Exonic hg38 STAD TCGA-HU-A4HD-01A 52 18 In-Frame Inter-chr p36.13 q34.3 Seq+ 104465 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPATCH1-FCGRT GPATCH1 chr19 33119117 + FCGRT chr19 49524507 + Exonic hg38 STAD TCGA-HU-A4HD-01A 51 16 In-Frame Intra-chr q13.11 q13.33 Seq+ 104466 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC82-MTMR2 CCDC82 chr11 96371013 - MTMR2 chr11 95850749 - Exonic hg38 STAD TCGA-HU-A4HD-01A 30 9 In-Frame Intra-chr q21 q21 Seq+ 104467 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H12C-SIDT2 ZC3H12C chr11 110165677 + SIDT2 chr11 117186071 + Exonic hg38 STAD TCGA-HU-A4HD-01A 23 8 Out-of-frame Intra-chr q22.3 q23.3 Seq+ 104468 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCC3-DHDH ABCC3 chr17 50634981 + DHDH chr19 48935000 + Exonic hg38 STAD TCGA-HU-A4HD-01A 16 8 In-Frame Inter-chr q21.33 q13.33 Seq+ 104469 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRE-SH3PXD2A PTPRE chr10 127907309 + SH3PXD2A chr10 103801362 - Exonic hg38 STAD TCGA-IN-7806-01A 12 4 Out-of-frame Intra-chr q26.2 q24.33 Seq+ 104470 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTHFS-ACAN MTHFS chr15 79889093 - ACAN chr15 88871382 + Exonic hg38 STAD TCGA-IN-8462-01A 14 3 In-Frame Intra-chr q25.1 q26.1 Seq+ 104471 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP1M2-CACNA1A AP1M2 chr19 10583606 - CACNA1A chr19 13455189 - Exonic hg38 STAD TCGA-IN-A6RI-01A 35 32 Out-of-frame Intra-chr p13.2 p13.13 Seq+ 104472 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIX-RFX1 NFIX chr19 12995864 + RFX1 chr19 13978086 - Exonic hg38 STAD TCGA-IN-A6RI-01A 21 12 In-Frame Intra-chr p13.13 Transcription factor p13.12 Transcription factor Seq+ 104473 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM2-NFIX DNM2 chr19 10759811 + NFIX chr19 13025021 + Exonic hg38 STAD TCGA-IN-A6RI-01A 17 10 Out-of-frame Intra-chr p13.2 p13.13 Transcription factor Seq+ 104474 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM2-RFX1 DNM2 chr19 10759811 + RFX1 chr19 13978086 - Exonic hg38 STAD TCGA-IN-A6RI-01A 10 9 Out-of-frame Intra-chr p13.2 p13.12 Transcription factor Seq+ 104475 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHUK-RHOQ CHUK chr10 100229428 - RHOQ chr2 46576087 + Exonic hg38 STAD TCGA-IN-A6RL-01A 11 2 In-Frame Inter-chr q24.31 Tumor suppressor gene p21 Seq+ 104476 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAU1-PABPC1L STAU1 chr20 49174195 - PABPC1L chr20 44916756 + Exonic hg38 STAD TCGA-IN-A6RL-01A 8 3 5'UTR-5'UTR Intra-chr q13.13 q13.12 Seq+ 104477 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTAN1-FPGS SPTAN1 chr9 128552696 + FPGS chr9 127804285 + Exonic hg38 STAD TCGA-IN-A6RN-01A 6 7 5'UTR-5'UTR Intra-chr q34.11 q34.11 Seq+ 104478 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHCYL1-GSTM5 AHCYL1 chr1 110009145 + GSTM5 chr1 109714947 + Exonic hg38 STAD TCGA-IN-A6RN-01A 7 2 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p13.3 Seq+ 104479 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS8-EPHB3 VPS8 chr3 185024389 + EPHB3 chr3 184575830 + Exonic hg38 STAD TCGA-IN-A6RN-01A 6 4 Out-of-frame Intra-chr q27.2 q27.1 Tumor suppressor gene Seq+ 104480 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATAD2A-FAM134C GATAD2A chr19 19406019 + FAM134C chr17 42586891 - Exonic hg38 STAD TCGA-IN-A6RO-01A 16 28 Out-of-frame Inter-chr p13.11 Transcription factor Seq+ 104481 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF3-KCNMA1 TAF3 chr10 7824560 + KCNMA1 chr10 77404023 - Exonic hg38 STAD TCGA-IN-A6RO-01A 10 4 Out-of-frame Intra-chr p14 q22.3 Seq+ 104482 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED24-CSF3 MED24 chr17 40019579 - CSF3 chr17 40017411 + Exonic hg38 STAD TCGA-IN-A6RS-01A 67 32 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 104483 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTLL5-EIF2B2 TTLL5 chr14 75820161 + EIF2B2 chr14 75007722 + Exonic hg38 STAD TCGA-IN-A6RS-01A 22 6 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 104484 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMA3-OSBPL1A LAMA3 chr18 23933935 + OSBPL1A chr18 24312106 - Exonic hg38 STAD TCGA-IN-A7NU-01A 51 22 In-Frame Intra-chr q11.2 q11.2 Seq+ 104485 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCIF1-ZSWIM1 PCIF1 chr20 45946083 + ZSWIM1 chr20 45883455 + Exonic hg38 STAD TCGA-IN-AB1V-01A 15 4 Out-of-frame Intra-chr q13.12 q13.12 Seq+ 104486 ChimerSeq TCGA FAWG TCGA_RNA-Seq WARS-EPB41L4B WARS chr14 100369087 - EPB41L4B chr9 109217145 - Exonic hg38 STAD TCGA-IN-AB1X-01A 119 22 Out-of-frame Inter-chr q32.2 q31.3 Seq+ 104487 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTLC2-DIAPH3 SPTLC2 chr14 77576767 - DIAPH3 chr13 59774823 - Exonic hg38 STAD TCGA-IN-AB1X-01A 73 28 In-Frame Inter-chr q24.3 q21.2 Seq+ 104488 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R5C-FOXN3 PPP2R5C chr14 101856885 + FOXN3 chr14 89486671 - Exonic hg38 STAD TCGA-IN-AB1X-01A 13 12 CDS-5'UTR Intra-chr q32.31 Tumor suppressor gene q32.11 Transcription factor Seq+ 104489 ChimerSeq TCGA FAWG TCGA_RNA-Seq BOLA2-MUSK BOLA2 chr16 29444398 - MUSK chr9 110734251 + Exonic hg38 STAD TCGA-IN-AB1X-01A 15 3 3'UTR-CDS Inter-chr p11.2 q31.3 TK:Musk 104490 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMG1P6-MUSK SMG1P6 chr16 29444398 - MUSK chr9 110734251 + Exonic hg38 STAD TCGA-IN-AB1X-01A 15 3 3'UTR-CDS Inter-chr p11.2 q31.3 TK:Musk 104491 ChimerSeq TCGA FAWG TCGA_RNA-Seq C16orf70-CRTC3 C16orf70 chr16 67132911 + CRTC3 chr15 90593636 + Exonic hg38 STAD TCGA-IN-AB1X-01A 9 7 In-Frame Inter-chr q22.1 q26.1 Seq+ 104492 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRK-PPP1R36 FRK chr6 116003877 - PPP1R36 chr14 64564751 + Exonic hg38 STAD TCGA-IN-AB1X-01A 9 4 Out-of-frame Inter-chr q22.1 TK:Src Tumor suppressor gene q23.3 Seq+ 104493 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK38L-CCDC91 STK38L chr12 27309197 + CCDC91 chr12 28450161 + Exonic hg38 STAD TCGA-IP-7968-01A 94 86 In-Frame Intra-chr p11.23 p11.22 Seq+ 104494 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM60A-TM7SF3 FAM60A chr12 31326024 - TM7SF3 chr12 27003390 - Exonic hg38 STAD TCGA-IP-7968-01A 56 149 Out-of-frame Intra-chr p11.23 Seq+ 104495 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD51B-GPHN RAD51B chr14 67887204 + GPHN chr14 67159415 + Exonic hg38 STAD TCGA-IP-7968-01A 42 22 In-Frame Intra-chr q24.1 q23.3 Seq+ 104496 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM60A-OVOS2 FAM60A chr12 31326024 - OVOS2 chr12 31116469 - Exonic hg38 STAD TCGA-IP-7968-01A 14 73 Out-of-frame Intra-chr 104497 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLRMT-PALM POLRMT chr19 619958 - PALM chr19 736019 + Exonic hg38 STAD TCGA-IP-7968-01A 23 5 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 104498 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS35-ETFRF1 MRPS35 chr12 27716458 + ETFRF1 chr12 25203920 + Exonic hg38 STAD TCGA-IP-7968-01A 17 20 CDS-5'UTR Intra-chr p11.22 p12.1 104499 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2CD5-IAPP C2CD5 chr12 22506711 - IAPP chr12 21373337 + Exonic hg38 STAD TCGA-IP-7968-01A 13 13 CDS-5'UTR Intra-chr p12.1 p12.1 Seq+ 104500 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS35-PPFIBP1 MRPS35 chr12 27710955 + PPFIBP1 chr12 27578152 + Exonic hg38 STAD TCGA-IP-7968-01A 9 4 CDS-5'UTR Intra-chr p11.22 p11.23 Seq+ 104501 ChimerSeq TCGA FAWG TCGA_RNA-Seq PALM-OR4G1P PALM chr19 748020 + OR4G1P chr19 104723 + Exonic hg38 STAD TCGA-IP-7968-01A 8 5 Out-of-frame Intra-chr p13.3 p13.3 104502 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAP1A-AK6 RAP1A chr1 111691364 + AK6 chr5 69366595 - Exonic hg38 STAD TCGA-KB-A6F7-01A 38 6 CDS-5'UTR Inter-chr p13.2 Tumor suppressor gene 104503 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAP1A-TAF9 RAP1A chr1 111691364 + TAF9 chr5 69366595 - Exonic hg38 STAD TCGA-KB-A6F7-01A 38 6 CDS-5'UTR Inter-chr p13.2 Tumor suppressor gene 104504 ChimerSeq TCGA FAWG TCGA_RNA-Seq ONECUT2-NEDD4L ONECUT2 chr18 57478848 + NEDD4L chr18 58165788 + Exonic hg38 STAD TCGA-KB-A93H-01A 14 7 3'UTR-CDS Intra-chr q21.31 Transcription factor q21.31 Tumor suppressor gene 104505 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF13B-IFT52 KIF13B chr8 29262980 - IFT52 chr20 43618940 + Exonic hg38 STAD TCGA-KB-A93H-01A 12 6 Out-of-frame Inter-chr p12 q13.12 104506 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP49-GSTA1 USP49 chr6 41891794 - GSTA1 chr6 52803878 - Exonic hg38 STAD TCGA-KB-A93J-01A 27 15 5'UTR-5'UTR Intra-chr p21.1 p12.2 104507 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE3B-GNS UBE3B chr12 109481742 + GNS chr12 64729057 - Exonic hg38 STAD TCGA-KB-A93J-01A 27 6 5'UTR-CDS Intra-chr q24.11 q14.3 Seq+ 104508 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNA13-TOM1 GNA13 chr17 65053502 - TOM1 chr22 35317877 + Exonic hg38 STAD TCGA-KB-A93J-01A 25 5 Out-of-frame Inter-chr q24.1 q12.3 Seq+ 104509 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF21A-CCDC114 KIF21A chr12 39330746 - CCDC114 chr19 48312116 - Exonic hg38 STAD TCGA-KB-A93J-01A 20 7 Out-of-frame Inter-chr q12 q13.33 Seq+ 104510 ChimerSeq TCGA FAWG TCGA_RNA-Seq FLNB-RAD18 FLNB chr3 58169793 + RAD18 chr3 8948570 - Exonic hg38 STAD TCGA-KB-A93J-01A 16 2 In-Frame Intra-chr p14.3 p25.3 Seq+ 104511 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBXAS1-TOMM7 TBXAS1 chr7 139829479 + TOMM7 chr7 22818048 - Exonic hg38 STAD TCGA-KB-A93J-01A 14 9 Out-of-frame Intra-chr q34 p15.3 Seq+ 104512 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOM1-GNA13 TOM1 chr22 35299980 + GNA13 chr17 65018303 - Exonic hg38 STAD TCGA-KB-A93J-01A 9 13 Out-of-frame Inter-chr q12.3 q24.1 Seq+ 104513 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH1L-MTX1P1 ASH1L chr1 155352706 - MTX1P1 chr1 155231136 + Exonic hg38 STAD TCGA-KB-A93J-01A 9 11 Out-of-frame Intra-chr q22 Transcription factor 104514 ChimerSeq TCGA FAWG TCGA_RNA-Seq PANK1-ABCC2 PANK1 chr10 89644600 - ABCC2 chr10 99846961 + Exonic hg38 STAD TCGA-KB-A93J-01A 10 3 Out-of-frame Intra-chr q23.31 q24.2 104515 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHBP1L1-MTCH2 EHBP1L1 chr11 65579436 + MTCH2 chr11 47635571 - Exonic hg38 STAD TCGA-MX-A663-01A 8 5 CDS-5'UTR Intra-chr q13.1 p11.2 104516 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC38A10-OGFOD3 SLC38A10 chr17 81251493 - OGFOD3 chr17 82411530 - Exonic hg38 STAD TCGA-MX-A663-01A 6 9 In-Frame Intra-chr q25.3 q25.3 Seq+ 104517 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC14B-AAED1 CDC14B chr9 96564777 - AAED1 chr9 96651712 - Exonic hg38 STAD TCGA-MX-A663-01A 6 5 Out-of-frame Intra-chr q22.33 q22.33 104518 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD52-ASPHD1 ANKRD52 chr12 56255784 - ASPHD1 chr16 29905788 + Exonic hg38 STAD TCGA-MX-A666-01A 76 24 Out-of-frame Inter-chr q13.3 p11.2 Seq+ 104519 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDCD2L-CACNA1A PDCD2L chr19 34413847 + CACNA1A chr19 13371779 - Exonic hg38 STAD TCGA-MX-A666-01A 33 12 In-Frame Intra-chr q13.11 p13.13 Seq+ 104520 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEPD-NDUFB7 PEPD chr19 33401721 - NDUFB7 chr19 14566933 - Exonic hg38 STAD TCGA-MX-A666-01A 19 5 In-Frame Intra-chr q13.11 p13.12 Seq+ 104521 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMG1P2-DOC2A SMG1P2 chr16 29559216 - DOC2A chr16 30009525 - Exonic hg38 STAD TCGA-MX-A666-01A 10 9 Out-of-frame Intra-chr p11.2 p11.2 104522 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMSS1-LNP1 CMSS1 chr3 100147061 + LNP1 chr3 100451719 + Exonic hg38 STAD TCGA-MX-A666-01A 11 3 In-Frame Intra-chr q12.1 q12.2 Seq+ 104523 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK5RAP1-EPS15L1 CDK5RAP1 chr20 33385650 - EPS15L1 chr19 16355851 - Exonic hg38 STAD TCGA-MX-A666-01A 9 4 In-Frame Inter-chr q11.21 p13.11 Seq+ 104524 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNQ1OT1-PSMA1 KCNQ1OT1 chr11 2699328 - PSMA1 chr11 14611151 - Exonic hg38 STAD TCGA-MX-A666-01A 9 2 3'UTR-5'UTR Intra-chr p15.5 p15.2 Seq+ 104525 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN7-ZNF385D ATXN7 chr3 63980167 + ZNF385D chr3 21437203 - Exonic hg38 STAD TCGA-R5-A7O7-01A 34 7 Out-of-frame Intra-chr p14.1 p24.3 Transcription factor Seq+ 104526 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGAP21-MSRB2 ARHGAP21 chr10 24721837 - MSRB2 chr10 23110242 + Exonic hg38 STAD TCGA-R5-A7O7-01A 23 13 In-Frame Intra-chr p12.1 p12.2 Seq+ 104527 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF3-CTNND2 ARHGEF3 chr3 57035088 - CTNND2 chr5 11732272 - Exonic hg38 STAD TCGA-R5-A7O7-01A 9 9 Out-of-frame Inter-chr p14.3 p15.2 Seq+ 104528 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOT1L-PLEKHF1 DOT1L chr19 2164265 + PLEKHF1 chr19 29673824 + Exonic hg38 STAD TCGA-R5-A7ZE-01B 56 44 CDS-5'UTR Intra-chr p13.3 Oncogene Transcription factor q12 Seq+ 104529 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0232-LRCH3 KIAA0232 chr4 6824684 + LRCH3 chr3 197814908 + Exonic hg38 STAD TCGA-R5-A7ZE-01B 48 22 Out-of-frame Inter-chr p16.1 q29 Seq+ 104530 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP3D1-PLEKHF1 AP3D1 chr19 2151239 - PLEKHF1 chr19 29673824 + Exonic hg38 STAD TCGA-R5-A7ZE-01B 32 27 CDS-5'UTR Intra-chr p13.3 q12 Seq+ 104531 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASC3-ACLY CASC3 chr17 40168417 + ACLY chr17 41867904 - Exonic hg38 STAD TCGA-R5-A7ZE-01B 23 19 Out-of-frame Intra-chr q21.1 q21.2 Seq+ 104532 ChimerSeq TCGA FAWG TCGA_RNA-Seq LCLAT1-FMNL2 LCLAT1 chr2 30447383 + FMNL2 chr2 152521943 + Exonic hg38 STAD TCGA-R5-A7ZE-01B 13 49 5'UTR-CDS Intra-chr p23.1 q23.3 Seq+ 104533 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMBRA1-CAT AMBRA1 chr11 46593828 - CAT chr11 34449192 + Exonic hg38 STAD TCGA-R5-A7ZE-01B 20 4 5'UTR-CDS Intra-chr p11.2 p13 Tumor suppressor gene Seq+ 104534 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMIP-BCO1 CMIP chr16 81445541 + BCO1 chr16 81280857 + Exonic hg38 STAD TCGA-R5-A7ZE-01B 15 5 In-Frame Intra-chr q23.2 q23.2 104535 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPF2-ERBB2 WIPF2 chr17 40265146 + ERBB2 chr17 39716301 + Exonic hg38 STAD TCGA-R5-A7ZE-01B 14 7 In-Frame Intra-chr q21.2 q12 Oncogene Seq+ 104536 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF2-CCT3 ARHGEF2 chr1 155954902 - CCT3 chr1 156335888 - Exonic hg38 STAD TCGA-R5-A7ZE-01B 13 8 In-Frame Intra-chr q22 q22 Seq+ 104537 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHPN2-TSHZ3 RHPN2 chr19 32990514 - TSHZ3 chr19 31275133 - Exonic hg38 STAD TCGA-R5-A7ZE-01B 8 4 CDS-3'UTR Intra-chr q13.11 q12 Transcription factor Seq+ 104538 ChimerSeq TCGA FAWG TCGA_RNA-Seq FA2H-GLG1 FA2H chr16 74740023 - GLG1 chr16 74472411 - Exonic hg38 STAD TCGA-R5-A7ZE-01B 7 6 In-Frame Intra-chr q23.1 q23.1 Seq+ 104539 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARMC7-CDR2L ARMC7 chr17 75110606 + CDR2L chr17 74999504 + Exonic hg38 STAD TCGA-R5-A7ZE-01B 7 4 In-Frame Intra-chr q25.1 q25.1 Seq+ 104540 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDM2-TMEM167A MDM2 chr12 68842184 + TMEM167A chr5 83054730 - Exonic hg38 STAD TCGA-R5-A7ZF-01A 8 0 Out-of-frame Inter-chr q15 Oncogene q14.2 Seq+ 104541 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2CA-PMPCA PPP2CA chr5 134225760 - PMPCA chr9 136421832 + Exonic hg38 STAD TCGA-R5-A7ZF-01A 5 4 In-Frame Inter-chr q31.1 Tumor suppressor gene q34.3 Seq+ 104542 ChimerSeq TCGA FAWG TCGA_RNA-Seq CP-WWTR1 CP chr3 149188052 - WWTR1 chr3 149542537 - Exonic hg38 STAD TCGA-R5-A7ZI-01A 8 4 In-Frame Intra-chr q25.1 q25.1 Seq+ 104543 ChimerSeq TCGA FAWG TCGA_RNA-Seq BZW2-GAP43 BZW2 chr7 16646288 + GAP43 chr3 115720794 + Exonic hg38 STAD TCGA-RD-A7C1-01A 20 8 5'UTR-CDS Inter-chr p21.1 q13.31 Seq+ 104544 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHCTF1-ATP2B4 AHCTF1 chr1 246913232 - ATP2B4 chr1 203707009 + Exonic hg38 STAD TCGA-RD-A8MV-01A 18 11 In-Frame Intra-chr q44 Transcription factor q32.1 Seq+ 104545 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBL-SC5D CBL chr11 119232695 + SC5D chr11 121306386 + Exonic hg38 STAD TCGA-RD-A8MV-01A 12 7 Out-of-frame Intra-chr q23.3 Oncogene Tumor suppressor gene q23.3 Seq+ 104546 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM39-RPF2P1 RBM39 chr20 35709224 - RPF2P1 chr20 35753317 + Exonic hg38 STAD TCGA-RD-A8MV-01A 7 5 Out-of-frame Intra-chr q11.22 q11.22 Seq+ 104547 ChimerSeq TCGA FAWG TCGA_RNA-Seq RC3H1-CENPL RC3H1 chr1 173972509 - CENPL chr1 173811306 - Exonic hg38 STAD TCGA-RD-A8MV-01A 5 8 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 104548 ChimerSeq TCGA FAWG TCGA_RNA-Seq SULF2-DEXI SULF2 chr20 47785343 - DEXI chr16 10929559 - Exonic hg38 STAD TCGA-RD-A8MW-01A 87 40 5'UTR-3'UTR Inter-chr q13.12 p13.13 Seq+ 104549 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFP64-CSE1L ZFP64 chr20 52191591 - CSE1L chr20 49084026 + Exonic hg38 STAD TCGA-RD-A8MW-01A 80 39 Out-of-frame Intra-chr q13.2 Transcription factor q13.13 Seq+ 104550 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H7A-SYT13 ZC3H7A chr16 11768315 - SYT13 chr11 45246512 - Exonic hg38 STAD TCGA-RD-A8MW-01A 40 23 Out-of-frame Inter-chr p13.13 p11.2 Tumor suppressor gene Seq+ 104551 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC63-PCBP2 SEC63 chr6 107893482 - PCBP2 chr12 53459272 + Exonic hg38 STAD TCGA-RD-A8MW-01A 37 5 In-Frame Inter-chr q21 q13.13 Seq+ 104552 ChimerSeq TCGA FAWG TCGA_RNA-Seq RERE-TPM3 RERE chr1 8614561 - TPM3 chr1 154176248 - Exonic hg38 STAD TCGA-RD-A8MW-01A 21 13 In-Frame Intra-chr p36.23 q21.3 Seq+ 104553 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKIB1-TNFRSF17 ANKIB1 chr7 92246519 + TNFRSF17 chr16 11966195 + Exonic hg38 STAD TCGA-RD-A8MW-01A 12 9 5'UTR-CDS Inter-chr q21.2 p13.13 Seq+ 104554 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALG8-SNX29 ALG8 chr11 78124021 - SNX29 chr16 12403448 + Exonic hg38 STAD TCGA-RD-A8MW-01A 10 8 In-Frame Inter-chr q14.1 p13.13 Seq+ 104555 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRMU-ATXN10 TRMU chr22 46343368 + ATXN10 chr22 45689712 + Exonic hg38 STAD TCGA-RD-A8MW-01A 5 13 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 104556 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAC1P2-EGFR RAC1P2 chr4 46724184 - EGFR chr7 55142286 + Exonic hg38 STAD TCGA-RD-A8N1-01A 6 4 Out-of-frame Inter-chr p12 p11.2 TK:EGFR Oncogene 104557 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK1-AAMDC PAK1 chr11 77374328 - AAMDC chr11 77869722 + Exonic hg38 STAD TCGA-RD-A8N4-01A 18 8 In-Frame Intra-chr q14.1 STE:STE20 q14.1 Seq+ 104558 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-CMPK1 UVRAG chr11 75961549 + CMPK1 chr1 47368469 + Exonic hg38 STAD TCGA-RD-A8N4-01A 6 7 In-Frame Inter-chr q13.5 Tumor suppressor gene p33 Oncogene Seq+ 104559 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF26A-C14orf2 KIF26A chr14 104139288 + C14orf2 chr14 103912694 - Exonic hg38 STAD TCGA-RD-A8N9-01A 11 5 Out-of-frame Intra-chr q32.33 q32.33 Seq+ 104560 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL3-MYCBP2 FBXL3 chr13 77026827 - MYCBP2 chr13 77177954 - Exonic hg38 STAD TCGA-RD-A8N9-01A 11 4 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 104561 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLDN18-ARHGAP26 CLDN18 chr3 138031105 + ARHGAP26 chr5 142903540 + Exonic hg38 STAD TCGA-SW-A7EA-01A 5 5 In-Frame Inter-chr q22.3 q31.3 KB Pub Seq+ 104562 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYRF-PPP1R32 MYRF chr11 61765712 + PPP1R32 chr11 61485338 + Exonic hg38 STAD TCGA-VQ-A8DU-01A 69 25 Out-of-frame Intra-chr q12.2 Transcription factor q12.2 104563 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGF2-QRSL1 IGF2 chr11 2140947 + QRSL1 chr6 106662980 + Exonic hg38 STAD TCGA-VQ-A8DU-01A 44 15 5'UTR-CDS Inter-chr p15.5 Oncogene q21 104564 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNCAIP-SRFBP1 SNCAIP chr5 122312284 + SRFBP1 chr5 122026942 + Exonic hg38 STAD TCGA-VQ-A8DU-01A 14 16 5'UTR-CDS Intra-chr q23.2 q23.1 104565 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH1-EXD3 NOTCH1 chr9 136545726 - EXD3 chr9 137395404 - Exonic hg38 STAD TCGA-VQ-A8DU-01A 10 3 CDS-5'UTR Intra-chr q34.3 Oncogene Tumor suppressor gene q34.3 104566 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOPEY2-NFIC DOPEY2 chr21 36164871 + NFIC chr19 3425106 + Exonic hg38 STAD TCGA-VQ-A8DU-01A 10 2 Out-of-frame Inter-chr q22.12 p13.3 Transcription factor 104567 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNCAIP-KIF3A SNCAIP chr5 122312284 + KIF3A chr5 132734478 - Exonic hg38 STAD TCGA-VQ-A8DU-01A 5 7 5'UTR-CDS Intra-chr q23.2 q31.1 104568 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF6L-SCGB1A1 TAF6L chr11 62776470 + SCGB1A1 chr11 62422221 + Exonic hg38 STAD TCGA-VQ-A8DV-01A 65 83 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 104569 ChimerSeq TCGA FAWG TCGA_RNA-Seq HP1BP3-PINK1 HP1BP3 chr1 20776597 - PINK1 chr1 20644490 + Exonic hg38 STAD TCGA-VQ-A8DV-01A 46 12 In-Frame Intra-chr p36.12 p36.12 Other:NKF2 Seq+ 104570 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM1A-TMEM115 KDM1A chr1 23019947 + TMEM115 chr3 50355547 - Exonic hg38 STAD TCGA-VQ-A8DV-01A 22 15 Out-of-frame Inter-chr p36.12 p21.31 Seq+ 104571 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFAND3-PDZD2 ZFAND3 chr6 37820016 + PDZD2 chr5 32061002 + Exonic hg38 STAD TCGA-VQ-A8DV-01A 13 3 In-Frame Inter-chr p21.2 p13.3 Seq+ 104572 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-WSB1 ERBB2 chr17 39727878 + WSB1 chr17 27298605 + Exonic hg38 STAD TCGA-VQ-A8DZ-01A 34 42 Out-of-frame Intra-chr q12 Oncogene q11.1 Seq+ 104573 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABR-ADGRB1 ABR chr17 1050050 - ADGRB1 chr8 142518138 + Exonic hg38 STAD TCGA-VQ-A8DZ-01A 27 9 5'UTR-CDS Inter-chr p13.3 q24.3 104574 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPAL2-RGS22 NIPAL2 chr8 98294003 - RGS22 chr8 99965430 - Exonic hg38 STAD TCGA-VQ-A8DZ-01A 12 4 In-Frame Intra-chr q22.2 q22.2 Seq+ 104575 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSF1-NEU3 RSF1 chr11 77764598 - NEU3 chr11 74994509 + Exonic hg38 STAD TCGA-VQ-A8DZ-01A 7 8 Out-of-frame Intra-chr q14.1 q13.4 Seq+ 104576 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAIAP2L1-GTF2IP1 BAIAP2L1 chr7 98362357 - GTF2IP1 chr7 75196796 - Exonic hg38 STAD TCGA-VQ-A8E0-01A 82 12 CDS-3'UTR Intra-chr q22.1 q11.23 104577 ChimerSeq TCGA FAWG TCGA_RNA-Seq IREB2-ADAMTS7P3 IREB2 chr15 78478397 + ADAMTS7P3 chr15 77992931 + Exonic hg38 STAD TCGA-VQ-A8E0-01A 35 6 Out-of-frame Intra-chr q25.1 q24.3 104578 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAIAP2L1-TSHZ2 BAIAP2L1 chr7 98400802 - TSHZ2 chr20 53487144 + Exonic hg38 STAD TCGA-VQ-A8E0-01A 22 1 CDS-3'UTR Inter-chr q22.1 q13.2 Transcription factor Seq+ 104579 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDSL-DTX1 SDSL chr12 113428459 + DTX1 chr12 113077424 + Exonic hg38 STAD TCGA-VQ-A8E0-01A 18 4 In-Frame Intra-chr q24.13 q24.13 Seq+ 104580 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHRNA7-PRR16 CHRNA7 chr15 32031037 + PRR16 chr5 120685954 + Exonic hg38 STAD TCGA-VQ-A8E0-01A 18 1 5'UTR-5'UTR Inter-chr q13.3 q23.1 Seq+ 104581 ChimerSeq TCGA FAWG TCGA_RNA-Seq MDN1-BACH2 MDN1 chr6 89718366 - BACH2 chr6 89928469 - Exonic hg38 STAD TCGA-VQ-A8E0-01A 17 1 CDS-5'UTR Intra-chr q15 q15 Transcription factor Seq+ 104582 ChimerSeq TCGA FAWG TCGA_RNA-Seq TESK2-PRDX1 TESK2 chr1 45490852 - PRDX1 chr1 45519054 - Exonic hg38 STAD TCGA-VQ-A8E0-01A 15 2 5'UTR-5'UTR Intra-chr p34.1 TKL:LISK p34.1 Seq+ 104583 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC7-LRRC8C CDC7 chr1 91514043 + LRRC8C chr1 89718924 + Exonic hg38 STAD TCGA-VQ-A8E0-01A 14 2 CDS-3'UTR Intra-chr p22.1 Other:CDC7 p22.2 Seq+ 104584 ChimerSeq TCGA FAWG TCGA_RNA-Seq URI1-PLEKHF1 URI1 chr19 29986417 + PLEKHF1 chr19 29673824 + Exonic hg38 STAD TCGA-VQ-A8E2-01A 70 23 5'UTR-5'UTR Intra-chr q12 q12 Seq+ 104585 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTK2-CASC11 PTK2 chr8 140830472 - CASC11 chr8 127733959 - Exonic hg38 STAD TCGA-VQ-A8E2-01A 44 24 3'UTR-3'UTR Intra-chr q24.3 q24.21 Seq+ 104586 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-PTK2 PVT1 chr8 127939676 + PTK2 chr8 140890769 - Exonic hg38 STAD TCGA-VQ-A8E2-01A 20 16 5'UTR-5'UTR Intra-chr q24.21 q24.3 Seq+ 104587 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXRED2-IFT27 FOXRED2 chr22 36501241 - IFT27 chr22 36767862 - Exonic hg38 STAD TCGA-VQ-A8E2-01A 17 9 In-Frame Intra-chr q12.3 q12.3 Seq+ 104588 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIST1H2BD-MDN1 HIST1H2BD chr6 26158559 + MDN1 chr6 89650847 - Exonic hg38 STAD TCGA-VQ-A8E2-01A 11 2 3'UTR-CDS Intra-chr p22.2 q15 Seq+ 104589 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM114A1-DAB1 FAM114A1 chr4 38891830 + DAB1 chr1 57649665 - Exonic hg38 STAD TCGA-VQ-A8E2-01A 7 6 5'UTR-5'UTR Inter-chr p14 p32.1 Seq+ 104590 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTK2-PVT1 PTK2 chr8 140890543 - PVT1 chr8 128070160 + Exonic hg38 STAD TCGA-VQ-A8E2-01A 4 8 5'UTR-5'UTR Intra-chr q24.3 q24.21 Seq+ 104591 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELF3-GPR37L1 ELF3 chr1 202011299 + GPR37L1 chr1 202127741 + Exonic hg38 STAD TCGA-VQ-A8E7-01B 171 50 Out-of-frame Intra-chr q32.1 Transcription factor q32.1 Seq+ 104592 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERRFI1-NCF2 ERRFI1 chr1 8026158 - NCF2 chr1 183573292 - Exonic hg38 STAD TCGA-VQ-A8E7-01B 139 10 5'UTR-CDS Intra-chr p36.23 Tumor suppressor gene q25.3 Seq+ 104593 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPOP-CPD EPOP chr17 38672318 - CPD chr17 30454728 + Exonic hg38 STAD TCGA-VQ-A8E7-01B 9 6 Out-of-frame Intra-chr q11.2 Tumor suppressor gene 104594 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB11FIP3-MCRIP2 RAB11FIP3 chr16 496859 + MCRIP2 chr16 647417 + Exonic hg38 STAD TCGA-VQ-A8P2-01A 13 11 3'UTR-CDS Intra-chr p13.3 104595 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHMT2-CRB1 EHMT2 chr6 31886581 - CRB1 chr1 197328422 + Exonic hg38 STAD TCGA-VQ-A8P5-01A 15 3 5'UTR-5'UTR Inter-chr q31.3 Seq+ 104596 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYRK1A-TTC3 DYRK1A chr21 37420384 + TTC3 chr21 37108392 + Exonic hg38 STAD TCGA-VQ-A8P8-01A 2 0 Out-of-frame Intra-chr q22.13 CMGC:DYRK q22.13 Seq+ 104597 ChimerSeq TCGA FAWG TCGA_RNA-Seq GP2-LYZ GP2 chr16 20311218 - LYZ chr12 69353773 + Exonic hg38 STAD TCGA-VQ-A8PC-01A 50 33 Out-of-frame Inter-chr p12.3 q15 Seq+ 104598 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROR1-UBE2U ROR1 chr1 64050716 + UBE2U chr1 64241652 + Exonic hg38 STAD TCGA-VQ-A8PC-01A 24 7 In-Frame Intra-chr p31.3 TK:Ror p31.3 Seq+ 104599 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMO7-KLF12 LMO7 chr13 75636726 + KLF12 chr13 73715525 - Exonic hg38 STAD TCGA-VQ-A8PC-01A 21 7 Out-of-frame Intra-chr q22.2 q22.1 Transcription factor Seq+ 104600 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEDD4L-ALPK2 NEDD4L chr18 58044708 + ALPK2 chr18 58529238 - Exonic hg38 STAD TCGA-VQ-A8PD-01A 16 4 Out-of-frame Intra-chr q21.31 Tumor suppressor gene q21.32 Seq+ 104601 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAP30BP-SMIM6 SAP30BP chr17 75671863 + SMIM6 chr17 75646655 + Exonic hg38 STAD TCGA-VQ-A8PD-01A 10 4 5'UTR-5'UTR Intra-chr q25.1 q25.1 Seq+ 104602 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO46-LGALS4 FBXO46 chr19 45730849 - LGALS4 chr19 38806595 - Exonic hg38 STAD TCGA-VQ-A8PE-01A 808 35 5'UTR-5'UTR Intra-chr q13.32 Seq+ 104603 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARMC6-UBA52 ARMC6 chr19 19033930 + UBA52 chr19 18573293 + Exonic hg38 STAD TCGA-VQ-A8PE-01A 141 41 5'UTR-5'UTR Intra-chr p13.11 p13.11 Seq+ 104604 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSTN-BANF2 DSTN chr20 17604631 + BANF2 chr20 17735665 + Exonic hg38 STAD TCGA-VQ-A8PE-01A 121 44 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 104605 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF7-ATP5G2 ATF7 chr12 53626279 - ATP5G2 chr12 53672645 - Exonic hg38 STAD TCGA-VQ-A8PE-01A 58 70 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 Seq+ 104606 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD8-MUC6 FRMD8 chr11 65400867 + MUC6 chr11 1015883 - Exonic hg38 STAD TCGA-VQ-A8PE-01A 63 17 CDS-5'UTR Intra-chr q13.1 Seq+ 104607 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKL2-MIR193BHG MKL2 chr16 14079354 + MIR193BHG chr16 14326013 + Exonic hg38 STAD TCGA-VQ-A8PE-01A 42 25 Out-of-frame Intra-chr p13.12 p13.12 104608 ChimerSeq TCGA FAWG TCGA_RNA-Seq LETM1-SLBP LETM1 chr4 1819338 - SLBP chr4 1703700 - Exonic hg38 STAD TCGA-VQ-A8PE-01A 37 11 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 104609 ChimerSeq TCGA FAWG TCGA_RNA-Seq IRAK2-VHL IRAK2 chr3 10178020 + VHL chr3 10149787 + Exonic hg38 STAD TCGA-VQ-A8PE-01A 35 9 In-Frame Intra-chr p25.3 TKL:IRAK p25.3 Oncogene Tumor suppressor gene Seq+ 104610 ChimerSeq TCGA FAWG TCGA_RNA-Seq KHDRBS1-LCK KHDRBS1 chr1 32039573 + LCK chr1 32274325 + Exonic hg38 STAD TCGA-VQ-A8PE-01A 28 5 5'UTR-5'UTR Intra-chr p35.2 p35.2 TK:Src Oncogene Seq+ 104611 ChimerSeq TCGA FAWG TCGA_RNA-Seq AXIN1-ARHGDIG AXIN1 chr16 346148 - ARHGDIG chr16 268776 + Exonic hg38 STAD TCGA-VQ-A8PE-01A 20 6 CDS-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 104612 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLEC16A-ATF7IP2 CLEC16A chr16 11061022 + ATF7IP2 chr16 10480879 + Exonic hg38 STAD TCGA-VQ-A8PE-01A 20 2 In-Frame Intra-chr p13.13 p13.2 Seq+ 104613 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB7A-COMP ZBTB7A chr19 4060604 - COMP chr19 18788642 - Exonic hg38 STAD TCGA-VQ-A8PE-01A 18 8 Out-of-frame Intra-chr p13.3 Transcription factor p13.11 Seq+ 104614 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRC-PTPRT SRC chr20 37365277 + PTPRT chr20 42161542 - Exonic hg38 STAD TCGA-VQ-A8PE-01A 16 10 5'UTR-CDS Intra-chr q11.23 TK:Src Oncogene q13.11 Oncogene Tumor suppressor gene Seq+ 104615 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV4-CHID1 ETV4 chr17 43544975 - CHID1 chr11 870499 - Exonic hg38 STAD TCGA-VQ-A8PE-01A 17 5 Out-of-frame Inter-chr q21.31 Oncogene Transcription factor p15.5 Seq+ 104616 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHG5-SAMD4B PLEKHG5 chr1 6490445 - SAMD4B chr19 39379966 + Exonic hg38 STAD TCGA-VQ-A8PE-01A 16 9 5'UTR-CDS Inter-chr p36.31 Oncogene q13.2 Seq+ 104617 ChimerSeq TCGA FAWG TCGA_RNA-Seq RABEP1-ZMYND15 RABEP1 chr17 5282520 + ZMYND15 chr17 4743303 + Exonic hg38 STAD TCGA-VQ-A8PE-01A 16 6 In-Frame Intra-chr p13.2 p13.2 Seq+ 104618 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF3B-POFUT1 KIF3B chr20 32327661 + POFUT1 chr20 32230819 + Exonic hg38 STAD TCGA-VQ-A8PE-01A 16 4 In-Frame Intra-chr q11.21 q11.21 Seq+ 104619 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP4-AGO3 USP4 chr3 49339924 - AGO3 chr1 36004341 + Exonic hg38 STAD TCGA-VQ-A8PE-01A 12 10 Out-of-frame Inter-chr p21.31 p34.3 Seq+ 104620 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13B-SPAG1 VPS13B chr8 99193057 + SPAG1 chr8 100191390 + Exonic hg38 STAD TCGA-VQ-A8PE-01A 14 2 In-Frame Intra-chr q22.2 q22.2 Seq+ 104621 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIPA1L3-RINL SIPA1L3 chr19 37907358 + RINL chr19 38871870 - Exonic hg38 STAD TCGA-VQ-A8PE-01A 12 8 5'UTR-5'UTR Intra-chr q13.13 Seq+ 104622 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLHL5-UBE2K KLHL5 chr4 39045096 + UBE2K chr4 39737420 + Exonic hg38 STAD TCGA-VQ-A8PE-01A 13 2 5'UTR-5'UTR Intra-chr p14 p14 Seq+ 104623 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSC2-TBL3 TSC2 chr16 2050487 + TBL3 chr16 1979878 + Exonic hg38 STAD TCGA-VQ-A8PE-01A 12 5 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 104624 ChimerSeq TCGA FAWG TCGA_RNA-Seq GDA-C9orf85 GDA chr9 72202742 + C9orf85 chr9 71918425 + Exonic hg38 STAD TCGA-VQ-A8PE-01A 10 11 5'UTR-5'UTR Intra-chr q21.13 q21.13 Seq+ 104625 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENG-NOL9 ENG chr9 127817149 - NOL9 chr1 6544922 - Exonic hg38 STAD TCGA-VQ-A8PE-01A 10 3 In-Frame Inter-chr q34.11 p36.31 Seq+ 104626 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIRLET7BHG-CDC42EP1 MIRLET7BHG chr22 46086160 + CDC42EP1 chr22 37566072 + Exonic hg38 STAD TCGA-VQ-A8PE-01A 9 7 5'UTR-5'UTR Intra-chr q13.31 q13.1 104627 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUBD1-PTRH2 TUBD1 chr17 59878227 - PTRH2 chr17 59679519 - Exonic hg38 STAD TCGA-VQ-A8PE-01A 10 3 Out-of-frame Intra-chr q23.1 q23.1 Seq+ 104628 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALY-TBKBP1 RALY chr20 34084809 + TBKBP1 chr17 47696079 + Exonic hg38 STAD TCGA-VQ-A8PE-01A 8 5 Out-of-frame Inter-chr q11.22 q21.32 104629 ChimerSeq TCGA FAWG TCGA_RNA-Seq BOK-MEOX1 BOK chr2 241562476 + MEOX1 chr17 43643660 - Exonic hg38 STAD TCGA-VQ-A8PE-01A 6 9 In-Frame Inter-chr q37.3 q21.31 Transcription factor Seq+ 104630 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPP14-FLNB RPP14 chr3 58310591 + FLNB chr3 58168440 + Exonic hg38 STAD TCGA-VQ-A8PH-01A 73 20 Out-of-frame Intra-chr p14.3 p14.3 Seq+ 104631 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCG1-EYA2 PLCG1 chr20 41170269 + EYA2 chr20 47169139 + Exonic hg38 STAD TCGA-VQ-A8PH-01A 64 16 In-Frame Intra-chr q12 Oncogene q13.12 Seq+ 104632 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNNA1-REEP2 CTNNA1 chr5 138827718 + REEP2 chr5 138441016 + Exonic hg38 STAD TCGA-VQ-A8PH-01A 20 4 Out-of-frame Intra-chr q31.2 Oncogene q31.2 Seq+ 104633 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEMP1-OR6C4 NEMP1 chr12 57069234 - OR6C4 chr12 55551209 + Exonic hg38 STAD TCGA-VQ-A8PH-01A 19 7 CDS-5'UTR Intra-chr q13.3 q13.2 104634 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAU1-MAP1LC3A STAU1 chr20 49151582 - MAP1LC3A chr20 34549905 + Exonic hg38 STAD TCGA-VQ-A8PH-01A 15 12 CDS-5'UTR Intra-chr q13.13 q11.22 Seq+ 104635 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMG7-LAMC2 SMG7 chr1 183472649 + LAMC2 chr1 183207881 + Exonic hg38 STAD TCGA-VQ-A8PH-01A 13 1 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 104636 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACOX1-EXOC7 ACOX1 chr17 75955566 - EXOC7 chr17 76094581 - Exonic hg38 STAD TCGA-VQ-A8PH-01A 10 2 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 104637 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADNP-SLPI ADNP chr20 50928651 - SLPI chr20 45253733 - Exonic hg38 STAD TCGA-VQ-A8PH-01A 9 5 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.12 Seq+ 104638 ChimerSeq TCGA FAWG TCGA_RNA-Seq AXIN1-MRPL28 AXIN1 chr16 352369 - MRPL28 chr16 368635 - Exonic hg38 STAD TCGA-VQ-A8PJ-01A 43 5 5'UTR-CDS Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 104639 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-MX1 TMPRSS2 chr21 41473325 - MX1 chr21 41430533 + Exonic hg38 STAD TCGA-VQ-A8PJ-01A 29 3 CDS-5'UTR Intra-chr q22.3 q22.3 Seq+ 104640 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP8-RPL28 AKAP8 chr19 15355307 - RPL28 chr19 55386350 + Exonic hg38 STAD TCGA-VQ-A8PJ-01A 20 3 CDS-5'UTR Intra-chr p13.12 Transcription factor q13.42 Seq+ 104641 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX5-SKAP1 DDX5 chr17 64500549 - SKAP1 chr17 48396785 - Exonic hg38 STAD TCGA-VQ-A8PJ-01A 20 0 In-Frame Intra-chr q23.3 q21.32 Seq+ 104642 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLIP2-GTF2I CLIP2 chr7 74317667 + GTF2I chr7 74689124 + Exonic hg38 STAD TCGA-VQ-A8PK-01A 114 19 CDS-5'UTR Intra-chr q11.23 q11.23 Transcription factor 104643 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1551-BORCS5 KIAA1551 chr12 31960871 + BORCS5 chr12 12435628 + Exonic hg38 STAD TCGA-VQ-A8PK-01A 114 16 Out-of-frame Intra-chr p11.21 104644 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABR-ASPA ABR chr17 1228793 - ASPA chr17 3481603 + Exonic hg38 STAD TCGA-VQ-A8PK-01A 14 1 Out-of-frame Intra-chr p13.3 p13.2 Seq+ 104645 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP54-AP3M1 USP54 chr10 73571421 - AP3M1 chr10 74138382 - Exonic hg38 STAD TCGA-VQ-A8PK-01A 7 4 CDS-5'UTR Intra-chr q22.2 q22.2 Seq+ 104646 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFE2L2-VMP1 NFE2L2 chr2 177264532 - VMP1 chr17 59773754 + Exonic hg38 STAD TCGA-VQ-A8PM-01A 142 13 In-Frame Inter-chr q31.2 Oncogene Transcription factor q23.1 Seq+ 104647 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAF3-WDR20 TRAF3 chr14 102871968 + WDR20 chr14 102194938 + Exonic hg38 STAD TCGA-VQ-A8PM-01A 23 9 In-Frame Intra-chr q32.32 q32.31 Seq+ 104648 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYRK1A-TTC3 DYRK1A chr21 37367628 + TTC3 chr21 37195675 + Exonic hg38 STAD TCGA-VQ-A8PM-01A 19 1 5'UTR-CDS Intra-chr q22.13 CMGC:DYRK q22.13 Seq+ 104649 ChimerSeq TCGA FAWG TCGA_RNA-Seq SZRD1-PRDM2 SZRD1 chr1 16367308 + PRDM2 chr1 13749361 + Exonic hg38 STAD TCGA-VQ-A8PM-01A 13 1 In-Frame Intra-chr p36.13 p36.21 Tumor suppressor gene Transcription factor Seq+ 104650 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNNA1-PKD2L2 CTNNA1 chr5 138827718 + PKD2L2 chr5 137942384 + Exonic hg38 STAD TCGA-VQ-A8PM-01A 6 6 CDS-3'UTR Intra-chr q31.2 Oncogene q31.2 104651 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED26-ZSCAN18 MED26 chr19 16627872 - ZSCAN18 chr19 58090386 - Exonic hg38 STAD TCGA-VQ-A8PQ-01A 35 10 Out-of-frame Intra-chr p13.11 q13.43 Transcription factor Seq+ 104652 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXW8-SRI FBXW8 chr12 116911355 + SRI chr7 88217191 - Exonic hg38 STAD TCGA-VQ-A8PQ-01A 11 12 In-Frame Inter-chr q24.22 q21.12 Seq+ 104653 ChimerSeq TCGA FAWG TCGA_RNA-Seq FUT9-FBXO21 FUT9 chr6 96016212 + FBXO21 chr12 117189362 - Exonic hg38 STAD TCGA-VQ-A8PQ-01A 8 6 5'UTR-CDS Inter-chr q16.1 q24.22 Seq+ 104654 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM179B-RSF1 TMEM179B chr11 62787527 + RSF1 chr11 77702495 - Exonic hg38 STAD TCGA-VQ-A8PU-01A 45 7 Out-of-frame Intra-chr q12.3 q14.1 Seq+ 104655 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEDD4L-ALPK2 NEDD4L chr18 58366228 + ALPK2 chr18 58524062 - Exonic hg38 STAD TCGA-VQ-A8PX-01A 145 16 In-Frame Intra-chr q21.31 Tumor suppressor gene q21.32 Seq+ 104656 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARMC8-CLDN18 ARMC8 chr3 138188530 + CLDN18 chr3 138029797 + Exonic hg38 STAD TCGA-VQ-A8PX-01A 19 0 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 104657 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCA4-CARM1 SMARCA4 chr19 10989443 + CARM1 chr19 10912184 + Exonic hg38 STAD TCGA-VQ-A91K-01A 226 45 In-Frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Seq+ 104658 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM59-SSBP3 TMEM59 chr1 54036610 - SSBP3 chr1 54257186 - Exonic hg38 STAD TCGA-VQ-A91K-01A 100 31 In-Frame Intra-chr p32.3 p32.3 Seq+ 104659 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM162A-CASR FAM162A chr3 122384299 + CASR chr3 122275812 + Exonic hg38 STAD TCGA-VQ-A91K-01A 37 7 Out-of-frame Intra-chr q21.1 q13.33 Seq+ 104660 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARAP1-FCHSD2 ARAP1 chr11 72694980 - FCHSD2 chr11 72868026 - Exonic hg38 STAD TCGA-VQ-A91K-01A 19 1 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 104661 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD3-JUP STARD3 chr17 39637231 + JUP chr17 41771862 - Exonic hg38 STAD TCGA-VQ-A91S-01A 1235 302 5'UTR-5'UTR Intra-chr q12 q21.2 Tumor suppressor gene Seq+ 104662 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED15-FKBP10 MED15 chr22 20537204 + FKBP10 chr17 41821654 + Exonic hg38 STAD TCGA-VQ-A91S-01A 858 177 Out-of-frame Inter-chr q11.21 q21.2 Seq+ 104663 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOX6-C20orf24 SOX6 chr11 15986204 - C20orf24 chr20 36609601 + Exonic hg38 STAD TCGA-VQ-A91S-01A 49 10 Out-of-frame Inter-chr p15.2 Transcription factor q11.23 Seq+ 104664 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNF4A-TTPAL HNF4A chr20 44355853 + TTPAL chr20 44479985 + Exonic hg38 STAD TCGA-VQ-A91S-01A 36 5 5'UTR-5'UTR Intra-chr q13.12 Tumor suppressor gene Transcription factor q13.12 Seq+ 104665 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP44-SPTAN1 CEP44 chr4 174302186 + SPTAN1 chr9 128591477 + Exonic hg38 STAD TCGA-VQ-A91S-01A 18 4 In-Frame Inter-chr q34.1 q34.11 Seq+ 104666 ChimerSeq TCGA FAWG TCGA_RNA-Seq RALGPS1-ZNF79 RALGPS1 chr9 127174782 + ZNF79 chr9 127435090 + Exonic hg38 STAD TCGA-VQ-A91S-01A 17 3 Out-of-frame Intra-chr q33.3 q33.3 Transcription factor Seq+ 104667 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPHP4-FAM71B NPHP4 chr1 5947104 - FAM71B chr5 157163658 - Exonic hg38 STAD TCGA-VQ-A91S-01A 11 4 In-Frame Inter-chr p36.31 q33.3 Seq+ 104668 ChimerSeq TCGA FAWG TCGA_RNA-Seq PODXL2-LSAMP PODXL2 chr3 127639523 + LSAMP chr3 116444955 - Exonic hg38 STAD TCGA-VQ-A91U-01A 5 1 Out-of-frame Intra-chr q21.3 q13.31 Tumor suppressor gene 104669 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS35-INTS13 MRPS35 chr12 27724186 + INTS13 chr12 26925851 - Exonic hg38 STAD TCGA-VQ-A91V-01A 12 5 Out-of-frame Intra-chr p11.22 p11.23 104670 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R1B-MIEN1 PPP1R1B chr17 39636004 + MIEN1 chr17 39729761 - Exonic hg38 STAD TCGA-VQ-A91X-01A 957 817 3'UTR-CDS Intra-chr q12 Tumor suppressor gene q12 Seq+ 104671 ChimerSeq TCGA FAWG TCGA_RNA-Seq STARD3-ACLY STARD3 chr17 39662344 + ACLY chr17 41897839 - Exonic hg38 STAD TCGA-VQ-A91X-01A 15 8 In-Frame Intra-chr q12 q21.2 Seq+ 104672 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNK2-FAM120A WNK2 chr9 93259614 + FAM120A chr9 93497471 + Exonic hg38 STAD TCGA-VQ-A91Z-01A 53 14 In-Frame Intra-chr q22.31 Tumor suppressor gene q22.31 Seq+ 104673 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC38A10-TMEM131 SLC38A10 chr17 81270918 - TMEM131 chr2 97805703 - Exonic hg38 STAD TCGA-VQ-A91Z-01A 29 4 In-Frame Inter-chr q25.3 q11.2 Seq+ 104674 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHAMP1-COL4A2 CHAMP1 chr13 114321232 + COL4A2 chr13 110507935 + Exonic hg38 STAD TCGA-VQ-A922-01A 89 15 5'UTR-CDS Intra-chr q34 Transcription factor q34 Seq+ 104675 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTBN1-SPAG5 SPTBN1 chr2 54599243 + SPAG5 chr17 28593066 - Exonic hg38 STAD TCGA-VQ-A922-01A 37 5 In-Frame Inter-chr p16.2 Tumor suppressor gene q11.2 Seq+ 104676 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRBP1-PCSK2 RRBP1 chr20 17615433 - PCSK2 chr20 17481582 + Exonic hg38 STAD TCGA-VQ-A922-01A 28 4 Out-of-frame Intra-chr p12.1 p12.1 Seq+ 104677 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKCZ-ATAD3C PRKCZ chr1 2059591 + ATAD3C chr1 1468384 + Exonic hg38 STAD TCGA-VQ-A922-01A 27 1 Out-of-frame Intra-chr p36.33 p36.33 Seq+ 104678 ChimerSeq TCGA FAWG TCGA_RNA-Seq C6orf106-DEFB110 C6orf106 chr6 34646601 - DEFB110 chr6 50009271 - Exonic hg38 STAD TCGA-VQ-A922-01A 25 5 Out-of-frame Intra-chr p21.31 p12.3 Seq+ 104679 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPX4-SPNS3 GPX4 chr19 1105809 + SPNS3 chr17 4478572 + Exonic hg38 STAD TCGA-VQ-A922-01A 25 2 Out-of-frame Inter-chr p13.3 p13.2 Seq+ 104680 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPR-CNR2 HNRNPR chr1 23333518 - CNR2 chr1 23875662 - Exonic hg38 STAD TCGA-VQ-A922-01A 22 3 5'UTR-5'UTR Intra-chr p36.11 Seq+ 104681 ChimerSeq TCGA FAWG TCGA_RNA-Seq C16orf72-ABAT C16orf72 chr16 9103259 + ABAT chr16 8757757 + Exonic hg38 STAD TCGA-VQ-A922-01A 19 4 In-Frame Intra-chr p13.2 p13.2 Seq+ 104682 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSG1-TNXB DSG1 chr18 31340025 + TNXB chr6 32070414 - Exonic hg38 STAD TCGA-VQ-A922-01A 18 2 CDS-5'UTR Inter-chr q12.1 Seq+ 104683 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP3CC-XPO7 PPP3CC chr8 22441458 + XPO7 chr8 21994363 + Exonic hg38 STAD TCGA-VQ-A922-01A 18 2 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.3 Seq+ 104684 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPZB-TMCO4 CAPZB chr1 19385505 - TMCO4 chr1 19700885 - Exonic hg38 STAD TCGA-VQ-A922-01A 14 1 Out-of-frame Intra-chr p36.13 p36.13 Seq+ 104685 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABI2-SPATS2L ABI2 chr2 203367044 + SPATS2L chr2 200389223 + Exonic hg38 STAD TCGA-VQ-A922-01A 13 3 In-Frame Intra-chr q33.2 Tumor suppressor gene q33.1 Seq+ 104686 ChimerSeq TCGA FAWG TCGA_RNA-Seq UGDH-PDS5A UGDH chr4 39527283 - PDS5A chr4 39908540 - Exonic hg38 STAD TCGA-VQ-A922-01A 13 2 5'UTR-CDS Intra-chr p14 p14 Seq+ 104687 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNNBL1-ETFA CTNNBL1 chr20 37803048 + ETFA chr15 76216597 - Exonic hg38 STAD TCGA-VQ-A922-01A 13 1 Out-of-frame Inter-chr q11.23 q24.3 Seq+ 104688 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGKA-DSG1 DGKA chr12 55940433 + DSG1 chr18 31328189 + Exonic hg38 STAD TCGA-VQ-A922-01A 12 5 In-Frame Inter-chr q13.2 q12.1 Seq+ 104689 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDR1-TUBB DDR1 chr6 30882983 + TUBB chr6 30723373 + Exonic hg38 STAD TCGA-VQ-A922-01A 11 1 3'UTR-3'UTR Intra-chr TK:DDR Seq+ 104690 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIS3-KLF12 DIS3 chr13 72771795 - KLF12 chr13 73846373 - Exonic hg38 STAD TCGA-VQ-A922-01A 10 2 In-Frame Intra-chr q21.33 q22.1 Transcription factor Seq+ 104691 ChimerSeq TCGA FAWG TCGA_RNA-Seq RCC1L-HIP1 RCC1L chr7 75058588 - HIP1 chr7 75599247 - Exonic hg38 STAD TCGA-VQ-A922-01A 10 1 In-Frame Intra-chr q11.23 q11.23 104692 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETFRF1-LRMP ETFRF1 chr12 25195337 + LRMP chr12 25106943 + Exonic hg38 STAD TCGA-VQ-A922-01A 10 0 5'UTR-5'UTR Intra-chr p12.1 p12.1 Tumor suppressor gene 104693 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG5-SCML4 ATG5 chr6 106279661 - SCML4 chr6 107772386 - Exonic hg38 STAD TCGA-VQ-A922-01A 9 3 CDS-5'UTR Intra-chr q21 q21 Transcription factor Seq+ 104694 ChimerSeq TCGA FAWG TCGA_RNA-Seq FANCD2-WDR93 FANCD2 chr3 10065979 + WDR93 chr15 89716911 + Exonic hg38 STAD TCGA-VQ-A922-01A 9 2 In-Frame Inter-chr p25.3 Oncogene q26.1 Seq+ 104695 ChimerSeq TCGA FAWG TCGA_RNA-Seq MINK1-SPNS2 MINK1 chr17 4833640 + SPNS2 chr17 4513247 + Exonic hg38 STAD TCGA-VQ-A922-01A 9 2 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 104696 ChimerSeq TCGA FAWG TCGA_RNA-Seq REPS2-TXLNG REPS2 chrX 17103779 + TXLNG chrX 16829576 + Exonic hg38 STAD TCGA-VQ-A922-01A 9 2 In-Frame Intra-chr p22.2 p22.2 Seq+ 104697 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC5L-POLH CDC5L chr6 44408632 + POLH chr6 43600988 + Exonic hg38 STAD TCGA-VQ-A922-01A 9 1 3'UTR-CDS Intra-chr p21.1 Transcription factor p21.1 Seq+ 104698 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF19A-1562D12.1 RNF19A chr8 100309867 - 1562D12.1 chr8 101461617 - Exonic hg38 STAD TCGA-VQ-A922-01A 7 7 Out-of-frame Intra-chr q22.2 104699 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPHOSPH9-PTPRR MPHOSPH9 chr12 123221372 - PTPRR chr12 70701323 - Exonic hg38 STAD TCGA-VQ-A922-01A 8 2 In-Frame Intra-chr q24.31 q15 Seq+ 104700 ChimerSeq TCGA FAWG TCGA_RNA-Seq VGLL4-TMEM40 VGLL4 chr3 11702971 - TMEM40 chr3 12749840 - Exonic hg38 STAD TCGA-VQ-A925-01A 106 27 In-Frame Intra-chr p25.2 p25.2 Seq+ 104701 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCK2-MRPS9 NCK2 chr2 105745138 + MRPS9 chr2 105088984 + Exonic hg38 STAD TCGA-VQ-A925-01A 81 24 5'UTR-CDS Intra-chr q12.2 q12.1 Seq+ 104702 ChimerSeq TCGA FAWG TCGA_RNA-Seq STN1-COL17A1 STN1 chr10 103889072 - COL17A1 chr10 104035563 - Exonic hg38 STAD TCGA-VQ-A925-01A 53 24 In-Frame Intra-chr q24.33 q25.1 104703 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRPK1-CCND3 SRPK1 chr6 35920468 - CCND3 chr6 41940585 - Exonic hg38 STAD TCGA-VQ-A925-01A 45 44 Out-of-frame Intra-chr p21.31 CMGC:SRPK p21.1 Seq+ 104704 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEL1L3-CCKAR SEL1L3 chr4 25757534 - CCKAR chr4 26483283 - Exonic hg38 STAD TCGA-VQ-A925-01A 47 6 Out-of-frame Intra-chr p15.2 p15.2 Seq+ 104705 ChimerSeq TCGA FAWG TCGA_RNA-Seq AK2-MKL1 AK2 chr1 33036736 - MKL1 chr22 40463286 - Exonic hg38 STAD TCGA-VQ-A925-01A 38 20 Out-of-frame Inter-chr p35.1 q13.2 Seq+ 104706 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L1-PHF20 EPB41L1 chr20 36112480 + PHF20 chr20 35842573 + Exonic hg38 STAD TCGA-VQ-A925-01A 22 8 5'UTR-CDS Intra-chr q11.23 q11.22 Transcription factor Seq+ 104707 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSH2-SLC6A4 SSH2 chr17 29793894 - SLC6A4 chr17 30222915 - Exonic hg38 STAD TCGA-VQ-A925-01A 18 20 CDS-5'UTR Intra-chr q11.2 q11.2 Seq+ 104708 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM182-IL18R1 TMEM182 chr2 102764427 + IL18R1 chr2 102362633 + Exonic hg38 STAD TCGA-VQ-A925-01A 15 4 CDS-5'UTR Intra-chr q12.1 q12.1 Seq+ 104709 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACOT7-PLEKHG5 ACOT7 chr1 6281102 - PLEKHG5 chr1 6496569 - Exonic hg38 STAD TCGA-VQ-A925-01A 14 4 Out-of-frame Intra-chr p36.31 p36.31 Oncogene Seq+ 104710 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMAD3-MAP2K5 SMAD3 chr15 67066360 + MAP2K5 chr15 67586846 + Exonic hg38 STAD TCGA-VQ-A925-01A 13 5 Out-of-frame Intra-chr q22.33 Transcription factor q23 STE:STE7 Seq+ 104711 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM4-ZCWPW1 TRIM4 chr7 99919009 - ZCWPW1 chr7 100409544 - Exonic hg38 STAD TCGA-VQ-A925-01A 10 7 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 104712 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR45B-RAB40B WDR45B chr17 82643949 - RAB40B chr17 82664556 - Exonic hg38 STAD TCGA-VQ-A928-01A 59 10 In-Frame Intra-chr q25.3 q25.3 Seq+ 104713 ChimerSeq TCGA FAWG TCGA_RNA-Seq RCOR1-AMN RCOR1 chr14 102593325 + AMN chr14 102923711 + Exonic hg38 STAD TCGA-VQ-A928-01A 44 33 In-Frame Intra-chr q32.31 q32.32 Seq+ 104714 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIP1R-C12orf65 HIP1R chr12 122859830 + C12orf65 chr12 123253647 + Exonic hg38 STAD TCGA-VQ-A928-01A 33 12 CDS-5'UTR Intra-chr q24.31 q24.31 Seq+ 104715 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBX5-SMUG1 CBX5 chr12 54280008 - SMUG1 chr12 54172109 - Exonic hg38 STAD TCGA-VQ-A928-01A 29 19 5'UTR-3'UTR Intra-chr q13.13 Tumor suppressor gene q13.13 Oncogene Seq+ 104716 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBTF-PYY UBTF chr17 44218172 - PYY chr17 43966532 - Exonic hg38 STAD TCGA-VQ-A928-01A 23 14 CDS-5'UTR Intra-chr q21.31 q21.31 Seq+ 104717 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS4-NARS2 INTS4 chr11 77978996 - NARS2 chr11 78443758 - Exonic hg38 STAD TCGA-VQ-A928-01A 25 3 In-Frame Intra-chr q14.1 q14.1 Seq+ 104718 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRD4-NOTCH3 BRD4 chr19 15332290 - NOTCH3 chr19 15170825 - Exonic hg38 STAD TCGA-VQ-A928-01A 21 4 5'UTR-CDS Intra-chr p13.12 Atypical:BRD p13.12 Oncogene Tumor suppressor gene Seq+ 104719 ChimerSeq TCGA FAWG TCGA_RNA-Seq PMPCB-WWOX PMPCB chr7 103298708 + WWOX chr16 79211608 + Exonic hg38 STAD TCGA-VQ-A928-01A 21 2 In-Frame Inter-chr q22.1 q23.1 Tumor suppressor gene Seq+ 104720 ChimerSeq TCGA FAWG TCGA_RNA-Seq PBRM1-WDR82 PBRM1 chr3 52678500 - WDR82 chr3 52270809 - Exonic hg38 STAD TCGA-VQ-A928-01A 15 3 In-Frame Intra-chr p21.1 Oncogene Tumor suppressor gene p21.2 Seq+ 104721 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTN3-COX8A RTN3 chr11 63681778 + COX8A chr11 63976225 + Exonic hg38 STAD TCGA-VQ-A928-01A 14 5 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 104722 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM204-HN1L TMEM204 chr16 1528796 + HN1L chr16 1685439 + Exonic hg38 STAD TCGA-VQ-A928-01A 13 5 Out-of-frame Intra-chr p13.3 Seq+ 104723 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP4R3A-CCDC88C PPP4R3A chr14 91485632 - CCDC88C chr14 91273653 - Exonic hg38 STAD TCGA-VQ-A928-01A 11 5 In-Frame Intra-chr q32.12 q32.12 104724 ChimerSeq TCGA FAWG TCGA_RNA-Seq UCKL1-ZBTB46 UCKL1 chr20 63940950 - ZBTB46 chr20 63790790 - Exonic hg38 STAD TCGA-VQ-A928-01A 7 6 CDS-5'UTR Intra-chr q13.33 q13.33 Transcription factor Seq+ 104725 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFEB-SUPT3H TFEB chr6 41689731 - SUPT3H chr6 44829857 - Exonic hg38 STAD TCGA-VQ-A92D-01A 200 38 In-Frame Intra-chr p21.1 Transcription factor p21.1 Seq+ 104726 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG13-C11orf49 ATG13 chr11 46650317 + C11orf49 chr11 47155176 + Exonic hg38 STAD TCGA-VQ-A92D-01A 104 11 In-Frame Intra-chr p11.2 p11.2 Seq+ 104727 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZRANB1-LHPP ZRANB1 chr10 124943307 + LHPP chr10 124517180 + Exonic hg38 STAD TCGA-VQ-A92D-01A 83 11 Out-of-frame Intra-chr q26.13 q26.13 Seq+ 104728 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDH3-SNTB2 CDH3 chr16 68687736 + SNTB2 chr16 69299590 + Exonic hg38 STAD TCGA-VQ-A92D-01A 66 9 In-Frame Intra-chr q22.1 Seq+ 104729 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK5RAP3-SP2 CDK5RAP3 chr17 47977910 + SP2 chr17 47924919 + Exonic hg38 STAD TCGA-VQ-A92D-01A 61 10 In-Frame Intra-chr q21.32 q21.32 Transcription factor Seq+ 104730 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNB2-TCF12 CCNB2 chr15 59117368 + TCF12 chr15 57286157 + Exonic hg38 STAD TCGA-VQ-A92D-01A 59 6 CDS-3'UTR Intra-chr q22.2 q21.3 Oncogene Transcription factor Seq+ 104731 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSDMB-NT5C3B GSDMB chr17 39909756 - NT5C3B chr17 41827626 - Exonic hg38 STAD TCGA-VQ-A92D-01A 53 18 In-Frame Intra-chr q21.1 q21.2 104732 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-VMP1 BCAS3 chr17 60910702 + VMP1 chr17 59817712 + Exonic hg38 STAD TCGA-VQ-A92D-01A 54 13 In-Frame Intra-chr q23.2 q23.1 Seq+ 104733 ChimerSeq TCGA FAWG TCGA_RNA-Seq UCK2-PBX1 UCK2 chr1 165905969 + PBX1 chr1 164792494 + Exonic hg38 STAD TCGA-VQ-A92D-01A 51 10 In-Frame Intra-chr q24.1 q23.3 Oncogene Transcription factor Seq+ 104734 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATAD2A-NCAN GATAD2A chr19 19436219 + NCAN chr19 19248700 + Exonic hg38 STAD TCGA-VQ-A92D-01A 43 6 5'UTR-CDS Intra-chr p13.11 Transcription factor p13.11 Seq+ 104735 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIEF1-TAB1 MIEF1 chr22 39504534 + TAB1 chr22 39426703 + Exonic hg38 STAD TCGA-VQ-A92D-01A 42 7 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 104736 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD8-MARK2 FRMD8 chr11 65387121 + MARK2 chr11 63895159 + Exonic hg38 STAD TCGA-VQ-A92D-01A 39 4 Out-of-frame Intra-chr q13.1 q13.1 CAMK:CAMKL Seq+ 104737 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST6GAL1-KNG1 ST6GAL1 chr3 186963926 + KNG1 chr3 186739099 + Exonic hg38 STAD TCGA-VQ-A92D-01A 31 6 5'UTR-CDS Intra-chr q27.3 q27.3 Seq+ 104738 ChimerSeq TCGA FAWG TCGA_RNA-Seq STX7-TARID STX7 chr6 132503446 - TARID chr6 133568248 - Exonic hg38 STAD TCGA-VQ-A92D-01A 31 6 3'UTR-3'UTR Intra-chr q23.2 q23.2 104739 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZZEF1-NLRP1 ZZEF1 chr17 4044224 - NLRP1 chr17 5584500 - Exonic hg38 STAD TCGA-VQ-A92D-01A 29 7 CDS-5'UTR Intra-chr p13.2 p13.2 Oncogene 104740 ChimerSeq TCGA FAWG TCGA_RNA-Seq LUC7L3-CACNA1G LUC7L3 chr17 50741731 + CACNA1G chr17 50575543 + Exonic hg38 STAD TCGA-VQ-A92D-01A 28 7 In-Frame Intra-chr q21.33 q21.33 Seq+ 104741 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2I-WBSCR22 GTF2I chr7 74658068 + WBSCR22 chr7 73686636 + Exonic hg38 STAD TCGA-VQ-A92D-01A 27 4 Out-of-frame Intra-chr q11.23 Transcription factor Seq+ 104742 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLCN3-PALLD CLCN3 chr4 169636088 + PALLD chr4 168668190 + Exonic hg38 STAD TCGA-VQ-A92D-01A 26 5 Out-of-frame Intra-chr q33 q32.3 Seq+ 104743 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBPJ-ZCCHC4 RBPJ chr4 26321048 + ZCCHC4 chr4 25361859 + Exonic hg38 STAD TCGA-VQ-A92D-01A 25 3 Out-of-frame Intra-chr p15.2 Transcription factor p15.2 Seq+ 104744 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITSN1-MRAP ITSN1 chr21 33819323 + MRAP chr21 32314551 + Exonic hg38 STAD TCGA-VQ-A92D-01A 23 6 Out-of-frame Intra-chr q22.11 q22.11 Seq+ 104745 ChimerSeq TCGA FAWG TCGA_RNA-Seq SF3B1-SATB2 SF3B1 chr2 197418509 - SATB2 chr2 199308957 - Exonic hg38 STAD TCGA-VQ-A92D-01A 23 5 In-Frame Intra-chr q33.1 Oncogene q33.1 Transcription factor Seq+ 104746 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC18-CYTH3 TNRC18 chr7 5387672 - CYTH3 chr7 6173733 - Exonic hg38 STAD TCGA-VQ-A92D-01A 22 7 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 104747 ChimerSeq TCGA FAWG TCGA_RNA-Seq EEF2K-SDR42E2 EEF2K chr16 22206679 + SDR42E2 chr16 22181519 + Exonic hg38 STAD TCGA-VQ-A92D-01A 22 0 5'UTR-5'UTR Intra-chr p12.2 104748 ChimerSeq TCGA FAWG TCGA_RNA-Seq VGLL4-IQSEC1 VGLL4 chr3 11702971 - IQSEC1 chr3 12941865 - Exonic hg38 STAD TCGA-VQ-A92D-01A 21 4 Out-of-frame Intra-chr p25.2 p25.2 Seq+ 104749 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCM2-OGDH CCM2 chr7 45000363 + OGDH chr7 44645327 + Exonic hg38 STAD TCGA-VQ-A92D-01A 20 6 In-Frame Intra-chr p13 p13 Seq+ 104750 ChimerSeq TCGA FAWG TCGA_RNA-Seq DENND1B-ATP6V1G3 DENND1B chr1 197715031 - ATP6V1G3 chr1 198529181 - Exonic hg38 STAD TCGA-VQ-A92D-01A 17 11 CDS-5'UTR Intra-chr q31.3 q31.3 Seq+ 104751 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGB4-LLGL2 ITGB4 chr17 75727505 + LLGL2 chr17 75556046 + Exonic hg38 STAD TCGA-VQ-A92D-01A 18 2 In-Frame Intra-chr q25.1 q25.1 Seq+ 104752 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITSN2-DTNB ITSN2 chr2 24303799 - DTNB chr2 25639094 - Exonic hg38 STAD TCGA-VQ-A92D-01A 17 0 Out-of-frame Intra-chr p23.3 p23.3 Seq+ 104753 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHN2-TAX1BP1 CHN2 chr7 29194990 + TAX1BP1 chr7 27785163 + Exonic hg38 STAD TCGA-VQ-A92D-01A 16 1 Out-of-frame Intra-chr p14.3 p15.2 Seq+ 104754 ChimerSeq TCGA FAWG TCGA_RNA-Seq IQGAP1-ABHD2 IQGAP1 chr15 90474133 + ABHD2 chr15 89175812 + Exonic hg38 STAD TCGA-VQ-A92D-01A 13 6 In-Frame Intra-chr q26.1 q26.1 Seq+ 104755 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL23-SAP30BP METTL23 chr17 76733375 + SAP30BP chr17 75693438 + Exonic hg38 STAD TCGA-VQ-A92D-01A 14 1 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 104756 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAD1L1-CARD11 MAD1L1 chr7 2014502 - CARD11 chr7 2917385 - Exonic hg38 STAD TCGA-VQ-A92D-01A 13 2 In-Frame Intra-chr p22.3 Tumor suppressor gene p22.2 Oncogene 104757 ChimerSeq TCGA FAWG TCGA_RNA-Seq FMN1-PATL2 FMN1 chr15 33064957 - PATL2 chr15 44676565 - Exonic hg38 STAD TCGA-VQ-A92D-01A 13 1 5'UTR-5'UTR Intra-chr q21.1 Seq+ 104758 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRBA-FBXW7 LRBA chr4 150808320 - FBXW7 chr4 152350124 - Exonic hg38 STAD TCGA-VQ-A92D-01A 11 2 Out-of-frame Intra-chr q31.3 q31.3 Oncogene Tumor suppressor gene Seq+ 104759 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF433-SLC1A6 ZNF433 chr19 12034829 - SLC1A6 chr19 14954329 - Exonic hg38 STAD TCGA-VQ-A92D-01A 10 5 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.12 104760 ChimerSeq TCGA FAWG TCGA_RNA-Seq URI1-EIF3H URI1 chr19 29942664 + EIF3H chr8 116658980 - Exonic hg38 STAD TCGA-VQ-A94O-01A 33 9 Out-of-frame Inter-chr q12 q24.11 Seq+ 104761 ChimerSeq TCGA FAWG TCGA_RNA-Seq COG4-AARS COG4 chr16 70496266 - AARS chr16 70277154 - Exonic hg38 STAD TCGA-VQ-A94O-01A 23 6 In-Frame Intra-chr q22.1 q22.1 Seq+ 104762 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR37L1-ELF3 GPR37L1 chr1 202123593 + ELF3 chr1 202015880 + Exonic hg38 STAD TCGA-VQ-A94O-01A 22 3 CDS-3'UTR Intra-chr q32.1 q32.1 Transcription factor Seq+ 104763 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLDN18-ARHGAP26 CLDN18 chr3 138031105 + ARHGAP26 chr5 143014080 + Exonic hg38 STAD TCGA-VQ-A94P-01A 3 0 In-Frame Inter-chr q22.3 q31.3 KB Pub Seq+ 104764 ChimerSeq TCGA FAWG TCGA_RNA-Seq RERE-UTS2 RERE chr1 8422727 - UTS2 chr1 7853505 - Exonic hg38 STAD TCGA-VQ-A94R-01A 85 11 5'UTR-5'UTR Intra-chr p36.23 p36.23 Seq+ 104765 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX52-SSH2 DDX52 chr17 37624344 - SSH2 chr17 29703062 - Exonic hg38 STAD TCGA-VQ-A94U-01A 7 6 5'UTR-CDS Intra-chr q12 q11.2 Seq+ 104766 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCSER1-SPARCL1 CCSER1 chr4 90468354 + SPARCL1 chr4 87473803 - Exonic hg38 STAD TCGA-VQ-AA68-01A 14 2 Out-of-frame Intra-chr q22.1 q22.1 Tumor suppressor gene Seq+ 104767 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC20-SPATA13 ZDHHC20 chr13 21413652 - SPATA13 chr13 24222819 + Exonic hg38 STAD TCGA-VQ-AA68-01A 11 3 Out-of-frame Intra-chr q12.11 q12.12 Seq+ 104768 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF20-CYP2D6 TCF20 chr22 42343479 - CYP2D6 chr22 42128944 - Exonic hg38 STAD TCGA-VQ-AA69-01A 14 3 5'UTR-5'UTR Intra-chr Transcription factor Oncogene Seq+ 104769 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESCO1-ARHGAP28 ESCO1 chr18 21600623 - ARHGAP28 chr18 6824762 + Exonic hg38 STAD TCGA-VQ-AA6A-01A 46 10 5'UTR-CDS Intra-chr q11.2 p11.31 Seq+ 104770 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTHFR-EXOSC10 MTHFR chr1 11800212 - EXOSC10 chr1 11095881 - Exonic hg38 STAD TCGA-VQ-AA6A-01A 40 12 Out-of-frame Intra-chr p36.22 p36.22 Seq+ 104771 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRP7BP-NFAM1 RRP7BP chr22 42580217 - NFAM1 chr22 42397956 - Exonic hg38 STAD TCGA-VQ-AA6A-01A 29 5 3'UTR-CDS Intra-chr q13.2 q13.2 104772 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSL2-UBASH3B MSL2 chr3 136194972 - UBASH3B chr11 122798942 + Exonic hg38 STAD TCGA-VQ-AA6A-01A 23 6 In-Frame Inter-chr q22.3 q24.1 Seq+ 104773 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK1-ANKRD13B TAOK1 chr17 29451680 + ANKRD13B chr17 29607742 + Exonic hg38 STAD TCGA-VQ-AA6A-01A 15 2 In-Frame Intra-chr q11.2 q11.2 Seq+ 104774 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA4B-CIB2 SEMA4B chr15 90185081 + CIB2 chr15 78111276 - Exonic hg38 STAD TCGA-VQ-AA6D-01A 377 96 5'UTR-5'UTR Intra-chr q26.1 q25.1 Seq+ 104775 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADGRG1-BCAR4 ADGRG1 chr16 57620136 + BCAR4 chr16 11820297 - Exonic hg38 STAD TCGA-VQ-AA6D-01A 149 54 5'UTR-3'UTR Intra-chr q21 p13.13 104776 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPHA2-FBXO42 EPHA2 chr1 16148378 - FBXO42 chr1 16256759 - Exonic hg38 STAD TCGA-VQ-AA6D-01A 114 21 In-Frame Intra-chr p36.13 Tumor suppressor gene p36.13 Seq+ 104777 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB3-IKZF4 ERBB3 chr12 56099747 + IKZF4 chr12 56027884 + Exonic hg38 STAD TCGA-VQ-AA6D-01A 77 18 Out-of-frame Intra-chr q13.2 Oncogene q13.2 Transcription factor Seq+ 104778 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA6-GGT7 NCOA6 chr20 34825472 - GGT7 chr20 34852538 - Exonic hg38 STAD TCGA-VQ-AA6D-01A 59 14 5'UTR-CDS Intra-chr q11.22 q11.22 Seq+ 104779 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAZ2A-NACA BAZ2A chr12 56630776 - NACA chr12 56724523 - Exonic hg38 STAD TCGA-VQ-AA6D-01A 49 20 5'UTR-5'UTR Intra-chr q13.3 Transcription factor q13.3 Seq+ 104780 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC5A1-YWHAH SLC5A1 chr22 32050014 + YWHAH chr22 31956139 + Exonic hg38 STAD TCGA-VQ-AA6D-01A 30 7 In-Frame Intra-chr q12.3 q12.3 Seq+ 104781 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK24-DOCK9 STK24 chr13 98519243 - DOCK9 chr13 98880672 - Exonic hg38 STAD TCGA-VQ-AA6D-01A 26 17 In-Frame Intra-chr q32.2 q32.3 Seq+ 104782 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP48-WNT4 USP48 chr1 21715389 - WNT4 chr1 22129851 - Exonic hg38 STAD TCGA-VQ-AA6D-01A 28 5 Out-of-frame Intra-chr p36.12 p36.12 Seq+ 104783 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTGES2-CIZ1 PTGES2 chr9 128128248 - CIZ1 chr9 128177763 - Exonic hg38 STAD TCGA-VQ-AA6D-01A 23 7 5'UTR-CDS Intra-chr q34.11 q34.11 Tumor suppressor gene Seq+ 104784 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC8-ZNF3 DNAJC8 chr1 28232921 - ZNF3 chr7 100077433 - Exonic hg38 STAD TCGA-VQ-AA6D-01A 20 17 5'UTR-5'UTR Inter-chr p35.3 q22.1 Transcription factor Seq+ 104785 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIMP2-RBFOX3 TIMP2 chr17 78924959 - RBFOX3 chr17 79097745 - Exonic hg38 STAD TCGA-VQ-AA6D-01A 21 2 In-Frame Intra-chr q25.3 q25.3 Seq+ 104786 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOXC4-HOXC12 HOXC4 chr12 54017414 + HOXC12 chr12 53956328 + Exonic hg38 STAD TCGA-VQ-AA6D-01A 19 3 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.13 Transcription factor 104787 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOXC6-HOXC12 HOXC6 chr12 54017414 + HOXC12 chr12 53956328 + Exonic hg38 STAD TCGA-VQ-AA6D-01A 19 3 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.13 Transcription factor 104788 ChimerSeq TCGA FAWG TCGA_RNA-Seq CORO1B-TMEM134 CORO1B chr11 67443404 - TMEM134 chr11 67468092 - Exonic hg38 STAD TCGA-VQ-AA6D-01A 15 4 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 104789 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATR-R3HDM2 ATR chr3 142566121 - R3HDM2 chr12 57256511 - Exonic hg38 STAD TCGA-VQ-AA6D-01A 14 5 In-Frame Inter-chr q23 Atypical:PIKK Oncogene Tumor suppressor gene q13.3 Seq+ 104790 ChimerSeq TCGA FAWG TCGA_RNA-Seq HKDC1-SUPV3L1 HKDC1 chr10 69250652 + SUPV3L1 chr10 69191655 + Exonic hg38 STAD TCGA-VQ-AA6D-01A 13 3 In-Frame Intra-chr q22.1 q22.1 Seq+ 104791 ChimerSeq TCGA FAWG TCGA_RNA-Seq GIGYF2-COG4 GIGYF2 chr2 232806657 + COG4 chr16 70517740 - Exonic hg38 STAD TCGA-VQ-AA6D-01A 12 6 Out-of-frame Inter-chr q37.1 q22.1 Seq+ 104792 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAD-TRMT112 BAD chr11 64284182 - TRMT112 chr11 64317365 - Exonic hg38 STAD TCGA-VQ-AA6D-01A 12 5 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 104793 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIM3-FRMD8 PIM3 chr22 49962831 + FRMD8 chr11 65413299 + Exonic hg38 STAD TCGA-VQ-AA6D-01A 11 1 Out-of-frame Inter-chr q13.33 CAMK:PIM q13.1 Seq+ 104794 ChimerSeq TCGA FAWG TCGA_RNA-Seq TET2-ARHGEF38 TET2 chr4 105190505 + ARHGEF38 chr4 105589248 + Exonic hg38 STAD TCGA-VQ-AA6D-01A 9 5 5'UTR-CDS Intra-chr q24 Oncogene Tumor suppressor gene Transcription factor q24 Seq+ 104795 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAIP-ACTBP13 TRAIP chr3 49847525 - ACTBP13 chr3 49876271 - Exonic hg38 STAD TCGA-VQ-AA6D-01A 10 0 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 104796 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMPDL3A-FABP7 SMPDL3A chr6 122789458 + FABP7 chr6 122780291 + Exonic hg38 STAD TCGA-VQ-AA6D-01A 9 3 In-Frame Intra-chr q22.31 q22.31 Seq+ 104797 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF7-ACE3P DCAF7 chr17 63550815 + ACE3P chr17 63507056 + Exonic hg38 STAD TCGA-VQ-AA6D-01A 8 2 Out-of-frame Intra-chr q23.3 q23.3 104798 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM87B-MERTK TMEM87B chr2 112060037 + MERTK chr2 112008383 + Exonic hg38 STAD TCGA-VQ-AA6D-01A 8 0 In-Frame Intra-chr q13 q13 Seq+ 104799 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL42-NACAP3 MRPL42 chr12 93487660 + NACAP3 chr12 93124377 - Exonic hg38 STAD TCGA-VQ-AA6F-01A 29 11 Out-of-frame Intra-chr q22 q22 104800 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCY10P1-APOBEC2 ADCY10P1 chr6 41137561 + APOBEC2 chr6 41061328 + Exonic hg38 STAD TCGA-VQ-AA6F-01A 21 8 5'UTR-CDS Intra-chr p21.1 p21.1 Seq+ 104801 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM31-ZFP57 TRIM31 chr6 30109026 - ZFP57 chr6 29677366 - Exonic hg38 STAD TCGA-VQ-AA6G-01A 57 32 5'UTR-5'UTR Intra-chr Tumor suppressor gene p22.1 Transcription factor 104802 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED24-STAC2 MED24 chr17 40053298 - STAC2 chr17 39213132 - Exonic hg38 STAD TCGA-VQ-AA6G-01A 18 6 In-Frame Intra-chr q21.1 q12 Seq+ 104803 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP3B1-CAMLG AP3B1 chr5 78216055 - CAMLG chr5 134750759 + Exonic hg38 STAD TCGA-VQ-AA6J-01A 136 62 In-Frame Intra-chr q14.1 q31.1 Seq+ 104804 ChimerSeq TCGA FAWG TCGA_RNA-Seq XKR6-HOOK3 XKR6 chr8 11200576 - HOOK3 chr8 42966473 + Exonic hg38 STAD TCGA-VQ-AA6J-01A 33 9 3'UTR-CDS Intra-chr p23.1 p11.21 Oncogene Seq+ 104805 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLCN5-PAGE1 CLCN5 chrX 49925314 + PAGE1 chrX 49691374 - Exonic hg38 STAD TCGA-VQ-AA6J-01A 28 12 In-Frame Intra-chr p11.23 p11.23 Seq+ 104806 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUGCT-RALA SUGCT chr7 40135120 + RALA chr7 39686631 + Exonic hg38 TGCT TCGA-2G-AAF6-01A 6 8 CDS-5'UTR Intra-chr p14.1 p14.1 104807 ChimerSeq TCGA FAWG TCGA_RNA-Seq GIT2-SLC2A13 GIT2 chr12 109988963 - SLC2A13 chr12 39951365 - Exonic hg38 TGCT TCGA-2G-AAF6-01A 3 8 Out-of-frame Intra-chr q24.11 q12 Seq+ 104808 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC91-AEBP2 CCDC91 chr12 28259442 + AEBP2 chr12 19462510 + Exonic hg38 TGCT TCGA-2G-AAF8-01A 6 21 Out-of-frame Intra-chr p11.22 p12.3 Transcription factor Seq+ 104809 ChimerSeq TCGA FAWG TCGA_RNA-Seq SF3B3-ADAM12 SF3B3 chr16 70570149 + ADAM12 chr10 126278988 - Exonic hg38 TGCT TCGA-2G-AAFI-01A 10 24 In-Frame Inter-chr q22.1 q26.2 Seq+ 104810 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2Q2-TMEM266 UBE2Q2 chr15 75891014 + TMEM266 chr15 76169816 + Exonic hg38 TGCT TCGA-2G-AAFI-01A 3 1 In-Frame Intra-chr q24.2 q24.2 104811 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAFB2-LONP1 SAFB2 chr19 5621309 - LONP1 chr19 5692208 - Exonic hg38 TGCT TCGA-2G-AAFL-01A 2 18 Out-of-frame Intra-chr p13.3 Tumor suppressor gene Transcription factor p13.3 Seq+ 104812 ChimerSeq TCGA FAWG TCGA_RNA-Seq TYW1B-GTF2IRD2P1 TYW1B chr7 72713621 - GTF2IRD2P1 chr7 73280118 - Exonic hg38 TGCT TCGA-2G-AAFM-01A 6 16 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 104813 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIN28A-CD52 LIN28A chr1 26411582 + CD52 chr1 26320171 + Exonic hg38 TGCT TCGA-2G-AAFV-01A 9 29 In-Frame Intra-chr p36.11 Transcription factor p36.11 Seq+ 104814 ChimerSeq TCGA FAWG TCGA_RNA-Seq AUTS2-NCOA3 AUTS2 chr7 70698620 + NCOA3 chr20 47583183 + Exonic hg38 TGCT TCGA-2G-AAFV-01A 2 2 CDS-5'UTR Inter-chr q11.22 q13.12 Transcription factor 104815 ChimerSeq TCGA FAWG TCGA_RNA-Seq RCC1-PCMT1 RCC1 chr1 28508160 + PCMT1 chr6 149789954 + Exonic hg38 TGCT TCGA-2G-AAG0-01A 1 4 5'UTR-CDS Inter-chr p35.3 q25.1 104816 ChimerSeq TCGA FAWG TCGA_RNA-Seq YARS-ZBTB8OS YARS chr1 32791162 - ZBTB8OS chr1 32631879 - Exonic hg38 TGCT TCGA-2G-AAG8-01A 49 334 In-Frame Intra-chr p35.1 p35.1 Seq+ 104817 ChimerSeq TCGA FAWG TCGA_RNA-Seq ICMT-ACOT7 ICMT chr1 6231902 - ACOT7 chr1 6264695 - Exonic hg38 TGCT TCGA-2G-AAG8-01A 9 52 In-Frame Intra-chr p36.31 p36.31 Seq+ 104818 ChimerSeq TCGA FAWG TCGA_RNA-Seq EDC3-SLC6A11 EDC3 chr15 74655733 - SLC6A11 chr3 10926004 + Exonic hg38 TGCT TCGA-2G-AAGA-01A 8 23 In-Frame Inter-chr q24.1 p25.3 Seq+ 104819 ChimerSeq TCGA FAWG TCGA_RNA-Seq RCOR1-EMC3 RCOR1 chr14 102593325 + EMC3 chr3 9981733 - Exonic hg38 TGCT TCGA-2G-AAGC-01A 3 11 CDS-3'UTR Inter-chr q32.31 p25.3 Seq+ 104820 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2B1-YAF2 ATP2B1 chr12 89627678 - YAF2 chr12 42199235 - Exonic hg38 TGCT TCGA-2G-AAGG-01A 4 37 In-Frame Intra-chr q21.33 q12 Seq+ 104821 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF13B-RPL23AP82 KIF13B chr8 29180104 - RPL23AP82 chr22 50798655 + Exonic hg38 TGCT TCGA-2G-AAGG-01A 3 6 CDS-5'UTR Inter-chr p12 104822 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD28-HACL1 ANKRD28 chr3 15859377 - HACL1 chr3 15568586 - Exonic hg38 TGCT TCGA-2G-AAGG-01A 2 2 In-Frame Intra-chr p25.1 p25.1 Seq+ 104823 ChimerSeq TCGA FAWG TCGA_RNA-Seq DMTN-NPM2 DMTN chr8 22073835 + NPM2 chr8 22025216 + Exonic hg38 TGCT TCGA-2G-AAGG-01A 1 3 CDS-5'UTR Intra-chr p21.3 p21.3 Seq+ 104824 ChimerSeq TCGA FAWG TCGA_RNA-Seq SP6-IGKJ4 SP6 chr17 47847039 - IGKJ4 chr2 88860920 - Exonic hg38 TGCT TCGA-2G-AAGJ-01A 292 0 Out-of-frame Inter-chr q21.32 Transcription factor p11.2 Seq+ 104825 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNB1-LDHB GNB1 chr1 1825397 - LDHB chr12 21654677 - Exonic hg38 TGCT TCGA-2G-AAGP-01A 13 26 5'UTR-5'UTR Inter-chr p36.33 p12.1 Seq+ 104826 ChimerSeq TCGA FAWG TCGA_RNA-Seq SORBS1-XRCC6P1 SORBS1 chr10 95493165 - XRCC6P1 chr10 93209061 - Exonic hg38 TGCT TCGA-2G-AAGT-01A 10 0 Out-of-frame Intra-chr q24.1 q23.33 Seq+ 104827 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF21A-CPM KIF21A chr12 39442927 - CPM chr12 68885889 - Exonic hg38 TGCT TCGA-2G-AAGT-01A 2 9 Out-of-frame Intra-chr q12 q15 Seq+ 104828 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIT2-LNP1 NIT2 chr3 100341161 + LNP1 chr3 100429697 + Exonic hg38 TGCT TCGA-2G-AAGT-01A 1000 1000 CDS-5'UTR Intra-chr q12.2 Tumor suppressor gene q12.2 Seq+ 104829 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTK7-SRF PTK7 chr6 43076567 + SRF chr6 43178806 + Exonic hg38 TGCT TCGA-2G-AAGZ-01A 2 14 In-Frame Intra-chr p21.1 p21.1 Transcription factor Seq+ 104830 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNMB4-CNOT2 KCNMB4 chr12 70367070 + CNOT2 chr12 70344128 + Exonic hg38 TGCT TCGA-2G-AAH0-01A 4 1 In-Frame Intra-chr q15 q15 104831 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF90-CMSS1 ZNF90 chr19 20078135 + CMSS1 chr3 100146973 + Exonic hg38 TGCT TCGA-2G-AAH3-01A 1 1 Out-of-frame Inter-chr p12 Transcription factor q12.1 104832 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABR-PITPNA ABR chr17 1050050 - PITPNA chr17 1541640 - Exonic hg38 TGCT TCGA-2G-AAH4-01A 1 19 5'UTR-CDS Intra-chr p13.3 p13.3 Seq+ 104833 ChimerSeq TCGA FAWG TCGA_RNA-Seq LONP2-PLEKHB2 LONP2 chr16 48303305 + PLEKHB2 chr2 131120934 + Exonic hg38 TGCT TCGA-2G-AAH8-01A 7 27 CDS-5'UTR Inter-chr q12.1 q21.1 Seq+ 104834 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4-NME6 MAP4 chr3 47977865 - NME6 chr3 48296829 - Exonic hg38 TGCT TCGA-2G-AAH8-01A 2 15 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 104835 ChimerSeq TCGA FAWG TCGA_RNA-Seq BICD1-BORCS5 BICD1 chr12 32107544 + BORCS5 chr12 12435628 + Exonic hg38 TGCT TCGA-2G-AAKD-01A 3 37 CDS-3'UTR Intra-chr p11.21 104836 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIBP1-SLCO1B1 PPFIBP1 chr12 27524365 + SLCO1B1 chr12 21141514 + Exonic hg38 TGCT TCGA-2G-AAKH-01A 16 36 5'UTR-5'UTR Intra-chr p11.23 p12.1 Seq+ 104837 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK6-TMEM205 DOCK6 chr19 11242045 - TMEM205 chr19 11345628 - Exonic hg38 TGCT TCGA-2G-AAKH-01A 5 3 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 104838 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLPPR2-ANGPTL8 PLPPR2 chr19 11357739 + ANGPTL8 chr19 11241660 + Exonic hg38 TGCT TCGA-2G-AAKH-01A 1 4 Out-of-frame Intra-chr p13.2 p13.2 104839 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF90-CMSS1 ZNF90 chr19 20078135 + CMSS1 chr3 100146973 + Exonic hg38 TGCT TCGA-2G-AAKL-01A 181 882 Out-of-frame Inter-chr p12 Transcription factor q12.1 104840 ChimerSeq TCGA FAWG TCGA_RNA-Seq BPTF-NOL11 BPTF chr17 67948306 + NOL11 chr17 67719674 + Exonic hg38 TGCT TCGA-2G-AAKL-01A 8 20 In-Frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 104841 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPPA5-KHDC3L DPPA5 chr6 73353853 - KHDC3L chr6 73362717 + Exonic hg38 TGCT TCGA-2G-AAKM-01A 5 7 CDS-5'UTR Intra-chr q13 q13 Seq+ 104842 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM2B-ORAI1 KDM2B chr12 121574547 - ORAI1 chr12 121641041 + Exonic hg38 TGCT TCGA-2G-AAL5-01A 4 7 CDS-3'UTR Intra-chr q24.31 Transcription factor q24.31 Seq+ 104843 ChimerSeq TCGA FAWG TCGA_RNA-Seq JARID2-NUDC JARID2 chr6 15246584 + NUDC chr1 26924089 + Exonic hg38 TGCT TCGA-2G-AAL7-01A 451 1180 In-Frame Inter-chr p22.3 p36.11 Seq+ 104844 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R5A-SPATA17 PPP2R5A chr1 212349242 + SPATA17 chr1 217866878 + Exonic hg38 TGCT TCGA-2G-AALF-01A 7 22 CDS-3'UTR Intra-chr q32.3 q41 Seq+ 104845 ChimerSeq TCGA FAWG TCGA_RNA-Seq HYOU1-SZRD1 HYOU1 chr11 119051438 - SZRD1 chr1 16391375 + Exonic hg38 TGCT TCGA-2G-AALN-01A 1 4 5'UTR-5'UTR Inter-chr p36.13 104846 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNHG23-MEG3 SNHG23 chr14 100969545 + MEG3 chr14 100829034 + Exonic hg38 TGCT TCGA-2G-AALR-01A 13 53 Out-of-frame Intra-chr q32.2 Tumor suppressor gene 104847 ChimerSeq TCGA FAWG TCGA_RNA-Seq DTNBP1-PITPNC1 DTNBP1 chr6 15662814 - PITPNC1 chr17 67669508 + Exonic hg38 TGCT TCGA-2G-AALW-01A 7 17 Out-of-frame Inter-chr p22.3 q24.2 Seq+ 104848 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP4C-MVP PPP4C chr16 30076475 + MVP chr16 29844493 + Exonic hg38 TGCT TCGA-2G-AALY-01A 2 1 In-Frame Intra-chr p11.2 p11.2 104849 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBLIM1-DDI2 FBLIM1 chr1 15758848 + DDI2 chr1 15659837 + Exonic hg38 TGCT TCGA-2G-AAM2-01A 2 7 5'UTR-3'UTR Intra-chr p36.21 p36.21 Seq+ 104850 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC56-DEAF1 LRRC56 chr11 549998 + DEAF1 chr11 679816 - Exonic hg38 TGCT TCGA-2G-AAM3-01A 3 2 3'UTR-5'UTR Intra-chr p15.5 Transcription factor Seq+ 104851 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOL8-FXN NOL8 chr9 92314267 - FXN chr9 69046385 + Exonic hg38 TGCT TCGA-2G-AAM4-01A 2 10 In-Frame Intra-chr q22.31 q21.11 Tumor suppressor gene Seq+ 104852 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS13B-IL2RB VPS13B chr8 99038566 + IL2RB chr22 37144205 - Exonic hg38 TGCT TCGA-2G-AAM4-01A 1 9 5'UTR-5'UTR Inter-chr q22.2 q12.3 104853 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZCCHC14-IGHJ4 ZCCHC14 chr16 87417713 - IGHJ4 chr14 105864254 - Exonic hg38 TGCT TCGA-2X-A9D6-01A 11 0 Out-of-frame Inter-chr q24.2 Seq+ 104854 ChimerSeq TCGA FAWG TCGA_RNA-Seq XBP1-TTC28 XBP1 chr22 28796047 - TTC28 chr22 28163599 - Exonic hg38 TGCT TCGA-2X-A9D6-01A 3 17 In-Frame Intra-chr q12.1 Transcription factor q12.1 Seq+ 104855 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESF1-RBM19 ESF1 chr20 13728378 - RBM19 chr12 113858896 - Exonic hg38 TGCT TCGA-4K-AA1G-01A 3 7 Out-of-frame Inter-chr p12.1 q24.21 Seq+ 104856 ChimerSeq TCGA FAWG TCGA_RNA-Seq GMCL1-DYSF GMCL1 chr2 69830152 + DYSF chr2 71480883 + Exonic hg38 TGCT TCGA-4K-AA1G-01A 2 2 Out-of-frame Intra-chr p13.3 p13.2 Seq+ 104857 ChimerSeq TCGA FAWG TCGA_RNA-Seq XBP1-TTC28 XBP1 chr22 28799057 - TTC28 chr22 28629830 - Exonic hg38 TGCT TCGA-4K-AAAL-01A 3 4 In-Frame Intra-chr q12.1 Transcription factor q12.1 Seq+ 104858 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP6-LRRC23 LRP6 chr12 12244262 - LRRC23 chr12 6905585 + Exonic hg38 TGCT TCGA-S6-A8JY-01A 12 64 5'UTR-5'UTR Intra-chr p13.31 Seq+ 104859 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDCL-NCS1 PDCL chr9 122828471 - NCS1 chr9 130217832 + Exonic hg38 TGCT TCGA-S6-A8JY-01A 1 8 5'UTR-CDS Intra-chr q33.2 q34.11 Seq+ 104860 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRPK1-CCL18 SRPK1 chr6 35920468 - CCL18 chr17 36070447 + Exonic hg38 TGCT TCGA-SB-A6J6-01A 19 36 3'UTR-3'UTR Inter-chr p21.31 CMGC:SRPK q12 Seq+ 104861 ChimerSeq TCGA FAWG TCGA_RNA-Seq OBSL1-IGHJ2 OBSL1 chr2 219571074 - IGHJ2 chr14 105865248 - Exonic hg38 TGCT TCGA-SB-A6J6-01A 9 0 Out-of-frame Inter-chr q35 104862 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCHSD2-GLYAT FCHSD2 chr11 73000990 - GLYAT chr11 58724511 - Exonic hg38 TGCT TCGA-SB-A76C-01A 11 22 CDS-5'UTR Intra-chr q13.4 q12.1 Seq+ 104863 ChimerSeq TCGA FAWG TCGA_RNA-Seq PI4KAP2-SERPIND1 PI4KAP2 chr22 21487565 - SERPIND1 chr22 20786875 + Exonic hg38 TGCT TCGA-SN-A6IS-01A 24 60 3'UTR-CDS Intra-chr q11.21 q11.21 104864 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRELD1-FANCD2OS CRELD1 chr3 9938106 + FANCD2OS chr3 10081531 - Exonic hg38 TGCT TCGA-SN-A6IS-01A 3 30 CDS-3'UTR Intra-chr p25.3 p25.3 Seq+ 104865 ChimerSeq TCGA FAWG TCGA_RNA-Seq THOC5-TTC28 THOC5 chr22 29549052 - TTC28 chr22 28306643 - Exonic hg38 TGCT TCGA-SN-A6IS-01A 1 12 In-Frame Intra-chr q12.2 q12.1 104866 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPX2-DEFB123 TPX2 chr20 31742647 + DEFB123 chr20 31450029 + Exonic hg38 TGCT TCGA-VF-A8AA-01A 8 88 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 104867 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF213-CEP104 RNF213 chr17 80363314 + CEP104 chr1 3816370 - Exonic hg38 TGCT TCGA-VF-A8AE-01A 2 11 In-Frame Inter-chr q25.3 Oncogene p36.32 Seq+ 104868 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCLO-PHTF2 PCLO chr7 83134250 - PHTF2 chr7 77900711 + Exonic hg38 TGCT TCGA-WZ-A7V3-01A 8 4 In-Frame Intra-chr q21.11 q11.23 Seq+ 104869 ChimerSeq TCGA FAWG TCGA_RNA-Seq HRASLS5-RBM19 HRASLS5 chr11 63488871 - RBM19 chr12 113823321 - Exonic hg38 TGCT TCGA-WZ-A7V3-01A 2 2 Out-of-frame Inter-chr q12.3 q24.21 104870 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID5A-IGHJ4 ARID5A chr2 96537452 + IGHJ4 chr14 105864256 - Exonic hg38 TGCT TCGA-WZ-A7V5-01A 8 0 Out-of-frame Inter-chr q11.2 Transcription factor Seq+ 104871 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTYH3-EIF3B TTYH3 chr7 2632278 + EIF3B chr7 2378689 + Exonic hg38 TGCT TCGA-WZ-A8D5-01A 1 6 In-Frame Intra-chr p22.3 p22.3 104872 ChimerSeq TCGA FAWG TCGA_RNA-Seq LUC7L2-WASH3P LUC7L2 chr7 139409654 + WASH3P chr15 101966070 + Exonic hg38 TGCT TCGA-X3-A8G4-01A 1 4 CDS-5'UTR Inter-chr q34 q26.3 104873 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNK2-MELTF TNK2 chr3 195908485 - MELTF chr3 197010794 - Exonic hg38 TGCT TCGA-XE-A8H4-01A 10 69 5'UTR-CDS Intra-chr q29 Oncogene q29 104874 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC62-KNTC1 CCDC62 chr12 122777683 + KNTC1 chr12 122601536 + Exonic hg38 TGCT TCGA-XE-A8H5-01A 1 5 Out-of-frame Intra-chr q24.31 q24.31 104875 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4-TENM4 MAP4 chr3 47914817 - TENM4 chr11 79070009 - Exonic hg38 TGCT TCGA-XE-AANJ-01A 11 35 CDS-5'UTR Inter-chr p21.31 q14.1 Seq+ 104876 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOS1-MAP4K3 SOS1 chr2 39051144 - MAP4K3 chr2 39378123 - Exonic hg38 TGCT TCGA-XE-AANR-01A 2 3 In-Frame Intra-chr p22.1 p22.1 Seq+ 104877 ChimerSeq TCGA FAWG TCGA_RNA-Seq PREX1-STAU1 PREX1 chr20 48627548 - STAU1 chr20 49151747 - Exonic hg38 TGCT TCGA-XY-A89B-01A 1 2 In-Frame Intra-chr q13.13 q13.13 104878 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF684-EIF2B3 ZNF684 chr1 40533181 + EIF2B3 chr1 44851003 - Exonic hg38 TGCT TCGA-XY-A8S2-01A 11 9 Out-of-frame Intra-chr p34.2 Transcription factor p34.1 Seq+ 104879 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXJ3-HIVEP3 FOXJ3 chr1 42311050 - HIVEP3 chr1 41849035 - Exonic hg38 TGCT TCGA-XY-A8S2-01A 7 21 CDS-5'UTR Intra-chr p34.2 Transcription factor p34.2 Tumor suppressor gene Transcription factor Seq+ 104880 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPATA6-PIK3R3 SPATA6 chr1 48451552 - PIK3R3 chr1 46077613 - Exonic hg38 TGCT TCGA-XY-A8S2-01A 2 3 Out-of-frame Intra-chr p33 p34.1 Seq+ 104881 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2B3-SCMH1 EIF2B3 chr1 44926628 - SCMH1 chr1 41048890 - Exonic hg38 TGCT TCGA-XY-A8S2-01A 1 5 Out-of-frame Intra-chr p34.1 p34.2 Transcription factor 104882 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM71-CNOT10 TRIM71 chr3 32818932 + CNOT10 chr3 32773457 + Exonic hg38 TGCT TCGA-XY-A8S3-01B 2 4 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 104883 ChimerSeq TCGA FAWG TCGA_RNA-Seq URI1-KCNIP4 URI1 chr19 29986417 + KCNIP4 chr4 20850667 - Exonic hg38 TGCT TCGA-YU-A90P-01A 8 6 In-Frame Inter-chr q12 p15.2 Seq+ 104884 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGD4-KIAA1551 FGD4 chr12 32598586 + KIAA1551 chr12 31987239 + Exonic hg38 TGCT TCGA-YU-A90Y-01A 6 25 Out-of-frame Intra-chr p11.21 p11.21 Seq+ 104885 ChimerSeq TCGA FAWG TCGA_RNA-Seq NET1-RIMKLB NET1 chr10 5429229 + RIMKLB chr12 8773321 + Exonic hg38 TGCT TCGA-YU-A94I-01A 8 20 Out-of-frame Inter-chr p15.1 p13.31 Seq+ 104886 ChimerSeq TCGA FAWG TCGA_RNA-Seq PI4KB-CDC42SE1 PI4KB chr1 151303541 - CDC42SE1 chr1 151059773 - Exonic hg38 TGCT TCGA-YU-A94I-01A 7 6 CDS-5'UTR Intra-chr q21.3 q21.3 Seq+ 104887 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTK2B-SLC5A1 PTK2B chr8 27325681 + SLC5A1 chr22 32066935 + Exonic hg38 TGCT TCGA-YU-A94I-01A 3 4 5'UTR-5'UTR Inter-chr p21.2 q12.3 Seq+ 104888 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGA9-ZNF48 ITGA9 chr3 37542585 + ZNF48 chr16 30395780 + Exonic hg38 TGCT TCGA-YU-AA4L-01A 3 15 CDS-5'UTR Inter-chr p22.2 Oncogene p11.2 Transcription factor Seq+ 104889 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDCP-SF3B6 WDCP chr2 24031063 - SF3B6 chr2 24068459 - Exonic hg38 TGCT TCGA-YU-AA4L-01A 4 7 In-Frame Intra-chr p23.3 p23.3 104890 ChimerSeq TCGA FAWG TCGA_RNA-Seq FXR2-TP53 FXR2 chr17 7601409 - TP53 chr17 7674290 - Exonic hg38 TGCT TCGA-YU-AA61-01A 2 29 In-Frame Intra-chr p13.1 p13.1 Oncogene Tumor suppressor gene Transcription factor Seq+ 104891 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHROOM3-ART3 SHROOM3 chr4 76555763 + ART3 chr4 76075881 + Exonic hg38 TGCT TCGA-YU-AA61-01A 1 14 CDS-5'UTR Intra-chr q21.1 q21.1 104892 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGCR2-ACOT7 DGCR2 chr22 19064848 - ACOT7 chr1 6349866 - Exonic hg38 TGCT TCGA-ZM-AA0B-01A 2 2 In-Frame Inter-chr q11.21 p36.31 104893 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERRFI1-CACNA1E ERRFI1 chr1 8026158 - CACNA1E chr1 181577766 + Exonic hg38 THCA TCGA-4C-A93U-01A 6 10 5'UTR-CDS Intra-chr p36.23 Tumor suppressor gene q25.3 Seq+ 104894 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAX8-PPARG PAX8 chr2 113236601 - PPARG chr3 12379704 + Exonic hg38 THCA TCGA-BJ-A0YZ-01A 49 498 In-Frame Inter-chr q14.1 Oncogene Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 104895 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPARG-PAX8 PPARG chr3 12312453 + PAX8 chr2 113227256 - Exonic hg38 THCA TCGA-BJ-A0YZ-01A 15 40 5'UTR-CDS Inter-chr p25.2 Oncogene Tumor suppressor gene Transcription factor q14.1 Oncogene Transcription factor KB Seq+ 104896 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR2-OFD1 FGFR2 chr10 121483698 - OFD1 chrX 13736478 + Exonic hg38 THCA TCGA-BJ-A0Z0-01A 36 94 In-Frame Inter-chr q26.13 TK:FGFR Oncogene p22.2 Seq+ 104897 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCORL1-RAB33A BCORL1 chrX 130039282 + RAB33A chrX 130184285 + Exonic hg38 THCA TCGA-BJ-A0Z2-01A 2 17 Out-of-frame Intra-chr q26.1 Tumor suppressor gene q26.1 Seq+ 104898 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAS8-WDR59 GAS8 chr16 90019768 + WDR59 chr16 74942826 - Exonic hg38 THCA TCGA-BJ-A0ZB-01A 6 18 5'UTR-CDS Intra-chr q24.3 q23.1 Seq+ 104899 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTEN-RUFY2 PTEN chr10 87865317 + RUFY2 chr10 68343701 - Exonic hg38 THCA TCGA-BJ-A0ZC-01A 40 159 Out-of-frame Intra-chr q23.31 Oncogene Tumor suppressor gene q21.3 104900 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAX8-PPARG PAX8 chr2 113235394 - PPARG chr3 12379704 + Exonic hg38 THCA TCGA-BJ-A0ZF-01A 152 1200 In-Frame Inter-chr q14.1 Oncogene Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 104901 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 59906122 - RET chr10 43116584 + Exonic hg38 THCA TCGA-BJ-A0ZJ-01A 25 96 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 104902 ChimerSeq TCGA FAWG TCGA_RNA-Seq THADA-IGF2BP3 THADA chr2 43397971 - IGF2BP3 chr7 23418824 - Exonic hg38 THCA TCGA-BJ-A28V-01A 1 4 Out-of-frame Inter-chr p21 p15.3 Seq+ 104903 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 59906122 - RET chr10 43116584 + Exonic hg38 THCA TCGA-BJ-A28Z-01A 10 83 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 104904 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSGALNACT2-SLC16A9 CSGALNACT2 chr10 43155810 + SLC16A9 chr10 59652950 - Exonic hg38 THCA TCGA-BJ-A28Z-01A 3 19 In-Frame Intra-chr q11.21 q21.2 Seq+ 104905 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP8-PAX8 LRP8 chr1 53258319 - PAX8 chr2 113246919 - Exonic hg38 THCA TCGA-BJ-A291-01A 128 414 In-Frame Inter-chr p32.3 q14.1 Oncogene Transcription factor Seq+ 104906 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAX8-GLIS1 PAX8 chr2 113278370 - GLIS1 chr1 53600278 - Exonic hg38 THCA TCGA-BJ-A291-01A 42 160 In-Frame Inter-chr q14.1 Oncogene Transcription factor p32.3 Transcription factor Seq+ 104907 ChimerSeq TCGA FAWG TCGA_RNA-Seq JAK1-WLS JAK1 chr1 64966333 - WLS chr1 68194227 - Exonic hg38 THCA TCGA-BJ-A291-01A 1 1 5'UTR-CDS Intra-chr p31.3 TK:JakA Oncogene p31.3 104908 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGGF1-RAF1 AGGF1 chr5 77039719 + RAF1 chr3 12600415 - Exonic hg38 THCA TCGA-BJ-A2N7-01A 1 3 In-Frame Inter-chr q13.3 p25.2 TKL:RAF Oncogene Seq+ 104909 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTMR12-TERT MTMR12 chr5 32263113 - TERT chr5 1282624 - Exonic hg38 THCA TCGA-BJ-A4O9-01A 1 15 Out-of-frame Intra-chr p13.3 p15.33 Oncogene Seq+ 104910 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 59794473 - RET chr10 43116584 + Exonic hg38 THCA TCGA-CE-A13K-01A 18 93 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 104911 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCAF8-VWA8 SCAF8 chr6 154774072 + VWA8 chr13 41787543 - Exonic hg38 THCA TCGA-CE-A13K-01A 4 23 Out-of-frame Inter-chr q25.2 q14.11 Seq+ 104912 ChimerSeq TCGA FAWG TCGA_RNA-Seq RET-MRLN RET chr10 43113675 + MRLN chr10 59738562 - Exonic hg38 THCA TCGA-CE-A13K-01A 5 12 CDS-5'UTR Intra-chr q11.21 TK:Ret Oncogene q21.2 104913 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAF3-ZDHHC14 TAF3 chr10 7824560 + ZDHHC14 chr6 157542585 + Exonic hg38 THCA TCGA-CE-A13K-01A 3 15 Out-of-frame Inter-chr p14 q25.3 Seq+ 104914 ChimerSeq TCGA FAWG TCGA_RNA-Seq UST-CCDC6 UST chr6 149021481 + CCDC6 chr10 59793109 - Exonic hg38 THCA TCGA-CE-A13K-01A 3 10 Out-of-frame Inter-chr q25.1 q21.2 Seq+ 104915 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM242-PREP TMEM242 chr6 157318782 - PREP chr6 105397927 - Exonic hg38 THCA TCGA-CE-A13K-01A 2 8 In-Frame Intra-chr q25.3 q21 Seq+ 104916 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 11853561 + NTRK3 chr15 88033045 - Exonic hg38 THCA TCGA-CE-A27D-01A 6 43 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 104917 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSBP2-NTRK1 SSBP2 chr5 81446868 - NTRK1 chr1 156875520 + Exonic hg38 THCA TCGA-CE-A3MD-01A 49 213 In-Frame Inter-chr q14.1 Tumor suppressor gene q23.1 Oncogene Seq+ 104918 ChimerSeq TCGA FAWG TCGA_RNA-Seq APC-INSRR APC chr5 112707882 + INSRR chr1 156858693 - Exonic hg38 THCA TCGA-CE-A3MD-01A 4 25 5'UTR-5'UTR Inter-chr q22.2 Oncogene Tumor suppressor gene q23.1 Seq+ 104919 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM27-RET TRIM27 chr6 28920012 - RET chr10 43116584 + Exonic hg38 THCA TCGA-CE-A481-01A 16 83 5'UTR-CDS Inter-chr q11.21 TK:Ret Oncogene KB Pub Seq+ 104920 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA4-RET NCOA4 chr10 46012883 - RET chr10 43116584 + Exonic hg38 THCA TCGA-CE-A482-01A 31 144 In-Frame Intra-chr q11.22 Oncogene Tumor suppressor gene q11.21 TK:Ret Oncogene KB Pub Seq+ 104921 ChimerSeq TCGA FAWG TCGA_RNA-Seq RET-NCOA4 RET chr10 43114736 + NCOA4 chr10 46011206 - Exonic hg38 THCA TCGA-CE-A482-01A 2 10 In-Frame Intra-chr q11.21 TK:Ret Oncogene q11.22 Oncogene Tumor suppressor gene KB Pub Seq+ 104922 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K4-SERINC1 MAP3K4 chr6 160992083 + SERINC1 chr6 122458681 - Exonic hg38 THCA TCGA-CE-A482-01A 1 2 Out-of-frame Intra-chr q26 STE:STE11 Tumor suppressor gene q22.31 104923 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM178B-RBM28 TMEM178B chr7 141212704 + RBM28 chr7 128315020 - Exonic hg38 THCA TCGA-CE-A484-01A 2 12 Out-of-frame Intra-chr q34 q32.1 Seq+ 104924 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM28-AOAH RBM28 chr7 128317659 - AOAH chr7 36594430 - Exonic hg38 THCA TCGA-CE-A484-01A 2 6 In-Frame Intra-chr q32.1 p14.2 Seq+ 104925 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPECC1L-RET SPECC1L chr22 24338477 + RET chr10 43116584 + Exonic hg38 THCA TCGA-CE-A485-01A 13 57 In-Frame Inter-chr q11.23 q11.21 TK:Ret Oncogene Seq+ 104926 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACF1-BRAF MACF1 chr1 39430908 + BRAF chr7 140787584 - Exonic hg38 THCA TCGA-DE-A0Y2-01A 79 229 In-Frame Inter-chr p34.3 q34 TKL:RAF Oncogene Seq+ 104927 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRAF-MACF1 BRAF chr7 140794308 - MACF1 chr1 39432535 + Exonic hg38 THCA TCGA-DE-A0Y2-01A 10 45 In-Frame Inter-chr q34 TKL:RAF Oncogene p34.3 Seq+ 104928 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRA2A-THADA TRA2A chr7 23505746 - THADA chr2 43333263 - Exonic hg38 THCA TCGA-DE-A2OL-01A 1 2 CDS-3'UTR Inter-chr p15.3 p21 Seq+ 104929 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA4-RET NCOA4 chr10 46012883 - RET chr10 43116584 + Exonic hg38 THCA TCGA-DE-A3KN-01A 24 124 In-Frame Intra-chr q11.22 Oncogene Tumor suppressor gene q11.21 TK:Ret Oncogene KB Pub Seq+ 104930 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAX8-PPARG PAX8 chr2 113235394 - PPARG chr3 12379704 + Exonic hg38 THCA TCGA-DE-A4M9-01A 146 1039 In-Frame Inter-chr q14.1 Oncogene Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 104931 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPARG-PAX8 PPARG chr3 12312453 + PAX8 chr2 113227256 - Exonic hg38 THCA TCGA-DE-A4M9-01A 6 40 5'UTR-CDS Inter-chr p25.2 Oncogene Tumor suppressor gene Transcription factor q14.1 Oncogene Transcription factor KB Seq+ 104932 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMTR1-ZFAND3 CMTR1 chr6 37477639 + ZFAND3 chr6 38152235 + Exonic hg38 THCA TCGA-DE-A4MA-01A 2 12 Out-of-frame Intra-chr p21.2 p21.2 Seq+ 104933 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLG5-RET DLG5 chr10 77828882 - RET chr10 43116584 + Exonic hg38 THCA TCGA-DE-A69K-01A 50 191 5'UTR-CDS Intra-chr q22.3 q11.21 TK:Ret Oncogene Seq+ 104934 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAPA-CTSB NAPA chr19 47487637 - CTSB chr8 11845058 - Exonic hg38 THCA TCGA-DJ-A13S-01A 1000 1000 3'UTR-3'UTR Inter-chr q13.33 p23.1 104935 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF5B-MGAT4A EIF5B chr2 99337589 + MGAT4A chr2 98678471 - Exonic hg38 THCA TCGA-DJ-A13T-01A 1 1 Out-of-frame Intra-chr q11.2 q11.2 104936 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLU-RPS4X CLU chr8 27604291 - RPS4X chrX 72273389 - Exonic hg38 THCA TCGA-DJ-A13V-01A 1 14 3'UTR-3'UTR Inter-chr p21.1 Tumor suppressor gene q13.1 104937 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP153-TMEM138 NUP153 chr6 17669293 - TMEM138 chr11 61368597 + Exonic hg38 THCA TCGA-DJ-A13W-01A 1 2 Out-of-frame Inter-chr p22.3 q12.2 104938 ChimerSeq TCGA FAWG TCGA_RNA-Seq HAUS4-CAT HAUS4 chr14 22952328 - CAT chr11 34461251 + Exonic hg38 THCA TCGA-DJ-A1QH-01A 1 1 In-Frame Inter-chr q11.2 p13 Tumor suppressor gene 104939 ChimerSeq TCGA FAWG TCGA_RNA-Seq TG-THADA TG chr8 132972741 + THADA chr2 43293213 - Exonic hg38 THCA TCGA-DJ-A1QL-01A 2171 14915 In-Frame Inter-chr q24.22 p21 Seq+ 104940 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP5H-SPG11 ATP5H chr17 75042181 - SPG11 chr15 44573745 - Exonic hg38 THCA TCGA-DJ-A2PN-01A 1 1 Out-of-frame Inter-chr q25.1 q21.1 104941 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENTPD1-CC2D2B ENTPD1 chr10 95864861 + CC2D2B chr10 95911301 + Exonic hg38 THCA TCGA-DJ-A2PX-01A 1000 1000 CDS-5'UTR Intra-chr q24.1 q24.1 104942 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL37-ARHGEF10L MRPL37 chr1 54200589 + ARHGEF10L chr1 17587460 + Exonic hg38 THCA TCGA-DJ-A2PY-01A 1 1 In-Frame Intra-chr p32.3 p36.13 104943 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 59906122 - RET chr10 43116584 + Exonic hg38 THCA TCGA-DJ-A2Q1-01A 2 23 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 104944 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGGF1-RAF1 AGGF1 chr5 77039719 + RAF1 chr3 12600415 - Exonic hg38 THCA TCGA-DJ-A2Q4-01A 1 1 In-Frame Inter-chr q13.3 p25.2 TKL:RAF Oncogene Seq+ 104945 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENTPD1-CC2D2B ENTPD1 chr10 95864861 + CC2D2B chr10 95911301 + Exonic hg38 THCA TCGA-DJ-A3UK-01A 1000 1000 CDS-5'UTR Intra-chr q24.1 q24.1 104946 ChimerSeq TCGA FAWG TCGA_RNA-Seq STRN-ALK STRN chr2 36916078 - ALK chr2 29223528 - Exonic hg38 THCA TCGA-DJ-A3US-01A 8 18 In-Frame Intra-chr p22.2 p23.1 TK:ALK Oncogene KB Pub Seq+ 104947 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 11853561 + NTRK3 chr15 88033045 - Exonic hg38 THCA TCGA-DJ-A3UV-01A 8 44 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 104948 ChimerSeq TCGA FAWG TCGA_RNA-Seq NTRK3-ETV6 NTRK3 chr15 88126271 - ETV6 chr12 11884445 + Exonic hg38 THCA TCGA-DJ-A3UV-01A 1 4 In-Frame Inter-chr q25.3 Oncogene Tumor suppressor gene p13.2 Tumor suppressor gene Transcription factor KB Seq+ 104949 ChimerSeq TCGA FAWG TCGA_RNA-Seq SND1-BRAF SND1 chr7 127721400 + BRAF chr7 140787584 - Exonic hg38 THCA TCGA-DJ-A3UZ-01A 1 10 In-Frame Intra-chr q32.1 q34 TKL:RAF Oncogene KB Pub Seq+ 104950 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 59906122 - RET chr10 43116584 + Exonic hg38 THCA TCGA-DJ-A3V3-01A 30 76 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 104951 ChimerSeq TCGA FAWG TCGA_RNA-Seq IRF2BP2-NTRK1 IRF2BP2 chr1 234608495 - NTRK1 chr1 156874571 + Exonic hg38 THCA TCGA-DJ-A4UP-01A 17 369 In-Frame Intra-chr q42.3 q23.1 Oncogene Seq+ 104952 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 59906122 - RET chr10 43116584 + Exonic hg38 THCA TCGA-DJ-A4UQ-01A 36 97 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 104953 ChimerSeq TCGA FAWG TCGA_RNA-Seq IRF2BP2-NTRK1 IRF2BP2 chr1 234608495 - NTRK1 chr1 156874571 + Exonic hg38 THCA TCGA-DJ-A4UQ-01A 1 5 In-Frame Intra-chr q42.3 q23.1 Oncogene Seq+ 104954 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD4B-TRAK1 FRMD4B chr3 69542206 - TRAK1 chr3 42087104 + Exonic hg38 THCA TCGA-DJ-A4UR-01A 1 6 Out-of-frame Intra-chr p14.1 p22.1 104955 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAK1-FRMD4B TRAK1 chr3 42014117 + FRMD4B chr3 69432761 - Exonic hg38 THCA TCGA-DJ-A4UR-01A 1 1 Out-of-frame Intra-chr p22.1 p14.1 104956 ChimerSeq TCGA FAWG TCGA_RNA-Seq MALAT1-ALK MALAT1 chr11 65501796 + ALK chr2 29229068 - Exonic hg38 THCA TCGA-DJ-A4UT-01A 123 2118 Out-of-frame Inter-chr q13.1 p23.1 TK:ALK Oncogene Seq+ 104957 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 11853561 + NTRK3 chr15 88033045 - Exonic hg38 THCA TCGA-DJ-A4V0-01A 4 15 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 104958 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 59906122 - RET chr10 43116584 + Exonic hg38 THCA TCGA-DJ-A4V5-01A 43 98 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 104959 ChimerSeq TCGA FAWG TCGA_RNA-Seq RET-CCDC6 RET chr10 43114736 + CCDC6 chr10 59852702 - Exonic hg38 THCA TCGA-DJ-A4V5-01A 1 3 In-Frame Intra-chr q11.21 TK:Ret Oncogene q21.2 KB Pub Seq+ 104960 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 59906122 - RET chr10 43116584 + Exonic hg38 THCA TCGA-DO-A1JZ-01A 47 122 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 104961 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 59906122 - RET chr10 43116584 + Exonic hg38 THCA TCGA-E3-A3E0-01A 48 140 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 104962 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCA4-CTSB SMARCA4 chr19 11024438 + CTSB chr8 11868087 - Exonic hg38 THCA TCGA-E3-A3E5-01A 1 2 CDS-3'UTR Inter-chr p13.2 Oncogene Tumor suppressor gene p23.1 104963 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBMS3-IGKJ4 RBMS3 chr3 29280891 - IGKJ4 chr2 88860922 - Exonic hg38 THCA TCGA-E8-A242-01A 70 0 Out-of-frame Inter-chr p24.1 Tumor suppressor gene p11.2 104964 ChimerSeq TCGA FAWG TCGA_RNA-Seq EML4-ALK EML4 chr2 42264951 + ALK chr2 29227074 - Exonic hg38 THCA TCGA-E8-A432-01A 9 91 Out-of-frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 104965 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFT74-CACNA2D3 IFT74 chr9 26990195 + CACNA2D3 chr3 55004763 + Exonic hg38 THCA TCGA-E8-A432-01A 3 14 In-Frame Inter-chr p21.2 p21.1 Tumor suppressor gene Seq+ 104966 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNA2D3-IFT74 CACNA2D3 chr3 54987753 + IFT74 chr9 27009020 + Exonic hg38 THCA TCGA-E8-A432-01A 1 8 In-Frame Inter-chr p21.1 Tumor suppressor gene p21.2 Seq+ 104967 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEPT1-PHF24 CEPT1 chr1 111161296 + PHF24 chr9 34971295 + Exonic hg38 THCA TCGA-E8-A432-01A 1 6 5'UTR-5'UTR Inter-chr p13.3 p13.3 104968 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 11853561 + NTRK3 chr15 88033045 - Exonic hg38 THCA TCGA-E8-A438-01A 7 18 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 104969 ChimerSeq TCGA FAWG TCGA_RNA-Seq NTRK3-ETV6 NTRK3 chr15 88126271 - ETV6 chr12 11869424 + Exonic hg38 THCA TCGA-E8-A438-01A 3 10 In-Frame Inter-chr q25.3 Oncogene Tumor suppressor gene p13.2 Tumor suppressor gene Transcription factor KB Seq+ 104970 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 59906122 - RET chr10 43116584 + Exonic hg38 THCA TCGA-E8-A44M-01A 15 72 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 104971 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANK3-CCDC6 ANK3 chr10 60055658 - CCDC6 chr10 59852702 - Exonic hg38 THCA TCGA-E8-A44M-01A 3 13 In-Frame Intra-chr q21.2 q21.2 Seq+ 104972 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS53-F7 VPS53 chr17 697418 - F7 chr13 113113752 + Exonic hg38 THCA TCGA-EL-A3CR-01A 3 2 5'UTR-CDS Inter-chr Tumor suppressor gene q34 Seq+ 104973 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 59906122 - RET chr10 43116584 + Exonic hg38 THCA TCGA-EL-A3CY-01A 14 74 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 104974 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPM3-NTRK1 TPM3 chr1 154170400 - NTRK1 chr1 156874571 + Exonic hg38 THCA TCGA-EL-A3D4-01A 40 170 In-Frame Intra-chr q21.3 q23.1 Oncogene KB Pub Seq+ 104975 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSHR-GTF2A1 TSHR chr14 80955850 + GTF2A1 chr14 81204104 - Exonic hg38 THCA TCGA-EL-A3GR-01A 1 1 Out-of-frame Intra-chr q31.1 Oncogene q31.1 104976 ChimerSeq TCGA FAWG TCGA_RNA-Seq GON4L-PMVK GON4L chr1 155757891 - PMVK chr1 154932415 - Exonic hg38 THCA TCGA-EL-A3H2-01A 1 5 Out-of-frame Intra-chr q22 q21.3 104977 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA4-RET NCOA4 chr10 46012883 - RET chr10 43116584 + Exonic hg38 THCA TCGA-EL-A3H3-01A 21 97 In-Frame Intra-chr q11.22 Oncogene Tumor suppressor gene q11.21 TK:Ret Oncogene KB Pub Seq+ 104978 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS8-EIF4G1 VPS8 chr3 184812225 + EIF4G1 chr3 184331266 + Exonic hg38 THCA TCGA-EL-A3H3-01A 17 18 5'UTR-CDS Intra-chr q27.2 q27.1 Seq+ 104979 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOS1-MAP4K3 SOS1 chr2 39056702 - MAP4K3 chr2 39378123 - Exonic hg38 THCA TCGA-EL-A3H8-01A 4 25 In-Frame Intra-chr p22.1 p22.1 Seq+ 104980 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRAF-AP3B1 BRAF chr7 140794308 - AP3B1 chr5 78039274 - Exonic hg38 THCA TCGA-EL-A3T0-01A 30 84 In-Frame Inter-chr q34 TKL:RAF Oncogene q14.1 Seq+ 104981 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGB1-CRYL1 HMGB1 chr13 30617216 - CRYL1 chr13 20512550 - Exonic hg38 THCA TCGA-EL-A3T0-01A 3 6 5'UTR-CDS Intra-chr q12.3 q12.11 Seq+ 104982 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP3B1-BRAF AP3B1 chr5 78089393 - BRAF chr7 140787584 - Exonic hg38 THCA TCGA-EL-A3T0-01A 2 7 In-Frame Inter-chr q14.1 q34 TKL:RAF Oncogene Seq+ 104983 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERC1-RET ERC1 chr12 1236904 + RET chr10 43116584 + Exonic hg38 THCA TCGA-EL-A3T9-01A 9 30 In-Frame Inter-chr q11.21 TK:Ret Oncogene KB Seq+ 104984 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 59906122 - RET chr10 43116584 + Exonic hg38 THCA TCGA-EL-A3TB-01A 54 119 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 104985 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRAF-SND1 BRAF chr7 140787548 - SND1 chr7 128084724 + Exonic hg38 THCA TCGA-EL-A3ZK-01A 34 78 In-Frame Intra-chr q34 TKL:RAF Oncogene q32.1 Seq+ 104986 ChimerSeq TCGA FAWG TCGA_RNA-Seq SND1-BRAF SND1 chr7 128081501 + BRAF chr7 140783157 - Exonic hg38 THCA TCGA-EL-A3ZK-01A 4 34 In-Frame Intra-chr q32.1 q34 TKL:RAF Oncogene KB Pub Seq+ 104987 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 11853561 + NTRK3 chr15 88033045 - Exonic hg38 THCA TCGA-EL-A3ZN-01A 7 19 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 104988 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 59906122 - RET chr10 43114587 + Exonic hg38 THCA TCGA-EL-A3ZP-01A 10 68 Out-of-frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 104989 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 59906122 - RET chr10 43116584 + Exonic hg38 THCA TCGA-EL-A3ZS-01A 10 108 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 104990 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2IRD1-ALK GTF2IRD1 chr7 74521297 + ALK chr2 29223528 - Exonic hg38 THCA TCGA-EL-A4KD-01A 10 27 In-Frame Inter-chr q11.23 Transcription factor p23.1 TK:ALK Oncogene Seq+ 104991 ChimerSeq TCGA FAWG TCGA_RNA-Seq FKBP2-CCDC88B FKBP2 chr11 64243401 + CCDC88B chr11 64353054 + Exonic hg38 THCA TCGA-EL-A4KG-01A 1000 1000 Out-of-frame Intra-chr q13.1 q13.1 104992 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGGF1-RAF1 AGGF1 chr5 77039719 + RAF1 chr3 12600415 - Exonic hg38 THCA TCGA-EM-A1CS-01A 9 41 In-Frame Inter-chr q13.3 p25.2 TKL:RAF Oncogene Seq+ 104993 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPO-COL9A3 TPO chr2 1477604 + COL9A3 chr20 62827923 + Exonic hg38 THCA TCGA-EM-A1YD-01A 1 20 3'UTR-CDS Inter-chr q13.33 104994 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2A2-COPG1 ATP2A2 chr12 110346876 + COPG1 chr3 129257578 + Exonic hg38 THCA TCGA-EM-A22L-01A 13 1 Out-of-frame Inter-chr q24.11 q21.3 Seq+ 104995 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF277-TPD52L1 ZNF277 chr7 112206807 + TPD52L1 chr6 125220078 + Exonic hg38 THCA TCGA-EM-A22Q-01A 2 1 In-Frame Inter-chr q31.1 Transcription factor q22.31 Seq+ 104996 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAT7-IGF2BP1 KAT7 chr17 49809208 + IGF2BP1 chr17 48999109 + Exonic hg38 THCA TCGA-EM-A2CM-01A 3 6 Out-of-frame Intra-chr q21.33 Transcription factor q21.32 Seq+ 104997 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXP2-ZNF680 FOXP2 chr7 114086611 + ZNF680 chr7 64522500 - Exonic hg38 THCA TCGA-EM-A2CN-01A 2 1 5'UTR-CDS Intra-chr q31.1 Transcription factor q11.21 Transcription factor 104998 ChimerSeq TCGA FAWG TCGA_RNA-Seq HP1BP3-THAP4 HP1BP3 chr1 20787195 - THAP4 chr2 241584725 - Exonic hg38 THCA TCGA-EM-A2CN-01A 1 2 5'UTR-CDS Inter-chr p36.12 q37.3 Transcription factor 104999 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACO2-TBCD ACO2 chr22 41520276 + TBCD chr17 82814840 + Exonic hg38 THCA TCGA-EM-A2CN-01A 1 1 5'UTR-5'UTR Inter-chr q13.2 105000 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNTA1-TPO SNTA1 chr20 33438841 - TPO chr2 1516883 + Exonic hg38 THCA TCGA-EM-A2CO-01A 2 2 CDS-3'UTR Inter-chr q11.21 105001 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNRF3-ITFG1 ZNRF3 chr22 28884066 + ITFG1 chr16 47162664 - Exonic hg38 THCA TCGA-EM-A2CO-01A 1 3 Out-of-frame Inter-chr q12.1 q12.1 105002 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAX8-NFE2L2 PAX8 chr2 113241551 - NFE2L2 chr2 177232583 - Exonic hg38 THCA TCGA-EM-A2CP-01A 82 562 In-Frame Intra-chr q14.1 Oncogene Transcription factor q31.2 Oncogene Transcription factor KB Pub Seq+ 105003 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA4-RET NCOA4 chr10 46012883 - RET chr10 43116584 + Exonic hg38 THCA TCGA-EM-A2CU-01A 22 171 In-Frame Intra-chr q11.22 Oncogene Tumor suppressor gene q11.21 TK:Ret Oncogene KB Pub Seq+ 105004 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOR1-RHOU NCOR1 chr17 16194462 - RHOU chr1 228737673 + Exonic hg38 THCA TCGA-EM-A2OX-01A 28 42 CDS-3'UTR Inter-chr p11.2 Oncogene q42.13 Seq+ 105005 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWP2-CTSB WWP2 chr16 69939906 + CTSB chr8 11847721 - Exonic hg38 THCA TCGA-EM-A2OX-01A 1000 1000 Out-of-frame Inter-chr q22.1 p23.1 105006 ChimerSeq TCGA FAWG TCGA_RNA-Seq DBN1-ZNF346 DBN1 chr5 177466772 - ZNF346 chr5 177064512 + Exonic hg38 THCA TCGA-EM-A2P1-01A 1 1 In-Frame Intra-chr q35.3 q35.2 Transcription factor 105007 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOX4-SMCO4 NOX4 chr11 89490458 - SMCO4 chr11 93499348 - Exonic hg38 THCA TCGA-EM-A2P1-01A 1 1 5'UTR-5'UTR Intra-chr q14.3 q21 105008 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCB4-GNAS PLCB4 chr20 9166695 + GNAS chr20 58895612 + Exonic hg38 THCA TCGA-EM-A2P2-01A 1 1 5'UTR-5'UTR Intra-chr p12.3 q13.32 Oncogene 105009 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMYND19-ARRDC1 ZMYND19 chr9 137586967 - ARRDC1 chr9 137612896 + Exonic hg38 THCA TCGA-EM-A2P3-01A 10 33 Out-of-frame Intra-chr q34.3 q34.3 Seq+ 105010 ChimerSeq TCGA FAWG TCGA_RNA-Seq EHMT1-ZMYND19 EHMT1 chr9 137619049 + ZMYND19 chr9 137588718 - Exonic hg38 THCA TCGA-EM-A2P3-01A 9 2 In-Frame Intra-chr q34.3 q34.3 Seq+ 105011 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAX8-PPARG PAX8 chr2 113235394 - PPARG chr3 12379704 + Exonic hg38 THCA TCGA-EM-A3AJ-01A 91 833 In-Frame Inter-chr q14.1 Oncogene Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 105012 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPARG-PAX8 PPARG chr3 12312453 + PAX8 chr2 113227256 - Exonic hg38 THCA TCGA-EM-A3AJ-01A 10 44 5'UTR-CDS Inter-chr p25.2 Oncogene Tumor suppressor gene Transcription factor q14.1 Oncogene Transcription factor KB Seq+ 105013 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 59906122 - RET chr10 43116584 + Exonic hg38 THCA TCGA-EM-A3AN-01A 21 103 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 105014 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFG-NTRK1 TFG chr3 100736716 + NTRK1 chr1 156874571 + Exonic hg38 THCA TCGA-EM-A3AO-01A 38 101 In-Frame Inter-chr q12.2 q23.1 Oncogene KB Pub Seq+ 105015 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLSTN3-PEX5 CLSTN3 chr12 7143311 + PEX5 chr12 7218402 + Exonic hg38 THCA TCGA-EM-A3AO-01A 1000 1000 CDS-3'UTR Intra-chr p13.31 p13.31 105016 ChimerSeq TCGA FAWG TCGA_RNA-Seq WARS-CCNY WARS chr14 100361708 - CCNY chr10 35483404 + Exonic hg38 THCA TCGA-EM-A3AQ-01A 4 16 In-Frame Inter-chr q32.2 p11.21 Seq+ 105017 ChimerSeq TCGA FAWG TCGA_RNA-Seq VCL-FGFR2 VCL chr10 73998375 + FGFR2 chr10 121480021 - Exonic hg38 THCA TCGA-EM-A3FP-01A 13 26 In-Frame Intra-chr q22.2 q26.13 TK:FGFR Oncogene Seq+ 105018 ChimerSeq TCGA FAWG TCGA_RNA-Seq TATDN1-GSDMB TATDN1 chr8 124538928 - GSDMB chr17 39909924 - Exonic hg38 THCA TCGA-EM-A3FP-01A 1 3 5'UTR-CDS Inter-chr q24.13 q21.1 105019 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERC1-RET ERC1 chr12 1444750 + RET chr10 43116584 + Exonic hg38 THCA TCGA-EM-A3FQ-01A 8 12 In-Frame Inter-chr q11.21 TK:Ret Oncogene KB Seq+ 105020 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYCBP2-SPPL2A MYCBP2 chr13 77087484 - SPPL2A chr15 50736740 - Exonic hg38 THCA TCGA-EM-A3O3-01A 1 6 Out-of-frame Inter-chr q22.3 q21.2 105021 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENTPD1-CC2D2B ENTPD1 chr10 95864861 + CC2D2B chr10 95911301 + Exonic hg38 THCA TCGA-EM-A3OB-01A 1000 1000 CDS-5'UTR Intra-chr q24.1 q24.1 105022 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZKSCAN1-UEVLD ZKSCAN1 chr7 100024307 + UEVLD chr11 18558330 - Exonic hg38 THCA TCGA-EM-A4FR-01A 1 1 Out-of-frame Inter-chr q22.1 Transcription factor p15.1 105023 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP2M1-KLHL6 AP2M1 chr3 184174959 + KLHL6 chr3 183508508 - Exonic hg38 THCA TCGA-ET-A25M-01A 1 2 5'UTR-CDS Intra-chr q27.1 q27.1 105024 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYTOR-ACOXL CYTOR chr2 87606769 + ACOXL chr2 110963624 + Exonic hg38 THCA TCGA-ET-A2MX-01A 6 28 Out-of-frame Intra-chr p11.2 q13 105025 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL2L11-BRAF BCL2L11 chr2 111124139 + BRAF chr7 140783157 - Exonic hg38 THCA TCGA-ET-A2MX-01A 5 17 In-Frame Inter-chr q13 Tumor suppressor gene q34 TKL:RAF Oncogene Seq+ 105026 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD11-DPEP1 ANKRD11 chr16 89490245 - DPEP1 chr16 89630305 + Exonic hg38 THCA TCGA-ET-A2N3-01B 1 2 5'UTR-5'UTR Intra-chr q24.3 q24.3 Seq+ 105027 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D22B-TSC22D1 TBC1D22B chr6 37331153 + TSC22D1 chr13 44433776 - Exonic hg38 THCA TCGA-ET-A2N4-01A 3 1 Out-of-frame Inter-chr p21.2 q14.11 Tumor suppressor gene Transcription factor 105028 ChimerSeq TCGA FAWG TCGA_RNA-Seq NTRK3-RBPMS NTRK3 chr15 88126271 - RBPMS chr8 30544494 + Exonic hg38 THCA TCGA-ET-A39L-01A 47 182 In-Frame Inter-chr q25.3 Oncogene Tumor suppressor gene p12 Seq+ 105029 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBPMS-NTRK3 RBPMS chr8 30504436 + NTRK3 chr15 88033045 - Exonic hg38 THCA TCGA-ET-A39L-01A 20 108 In-Frame Inter-chr p12 q25.3 Oncogene Tumor suppressor gene Seq+ 105030 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAX8-PPARG PAX8 chr2 113235394 - PPARG chr3 12379704 + Exonic hg38 THCA TCGA-ET-A39N-01A 77 769 In-Frame Inter-chr q14.1 Oncogene Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub Seq+ 105031 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 59906122 - RET chr10 43116584 + Exonic hg38 THCA TCGA-ET-A39R-01A 16 97 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 105032 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRAF-FAM114A2 BRAF chr7 140783021 - FAM114A2 chr5 154002969 - Exonic hg38 THCA TCGA-ET-A3BN-01A 22 107 In-Frame Inter-chr q34 TKL:RAF Oncogene q33.2 Seq+ 105033 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM114A2-BRAF FAM114A2 chr5 154011241 - BRAF chr7 140781693 - Exonic hg38 THCA TCGA-ET-A3BN-01A 2 15 In-Frame Inter-chr q33.2 q34 TKL:RAF Oncogene Seq+ 105034 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELSR2-SORT1 CELSR2 chr1 109273926 + SORT1 chr1 109312131 - Exonic hg38 THCA TCGA-ET-A3BU-01A 1000 1000 Out-of-frame Intra-chr p13.3 p13.3 105035 ChimerSeq TCGA FAWG TCGA_RNA-Seq FKBP15-RET FKBP15 chr9 113170522 - RET chr10 43116584 + Exonic hg38 THCA TCGA-ET-A3DQ-01A 3 22 In-Frame Inter-chr q32 q11.21 TK:Ret Oncogene Seq+ 105036 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 59906122 - RET chr10 43116584 + Exonic hg38 THCA TCGA-ET-A3DR-01A 29 102 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 105037 ChimerSeq TCGA FAWG TCGA_RNA-Seq KPNA1-IGHJ5 KPNA1 chr3 122514503 - IGHJ5 chr14 105863859 - Exonic hg38 THCA TCGA-ET-A3DU-01A 15 0 Out-of-frame Inter-chr q21.1 105038 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRA2A-THADA TRA2A chr7 23505746 - THADA chr2 43232882 - Exonic hg38 THCA TCGA-ET-A3DV-01A 3 7 In-Frame Inter-chr p15.3 p21 Seq+ 105039 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBL1XR1-RET TBL1XR1 chr3 177047300 - RET chr10 43116584 + Exonic hg38 THCA TCGA-ET-A40R-01A 22 87 In-Frame Inter-chr q26.32 q11.21 TK:Ret Oncogene Seq+ 105040 ChimerSeq TCGA FAWG TCGA_RNA-Seq SQSTM1-NTRK1 SQSTM1 chr5 179825226 + NTRK1 chr1 156874571 + Exonic hg38 THCA TCGA-ET-A40S-01A 263 1220 3'UTR-CDS Inter-chr q35.3 q23.1 Oncogene KB Pub Seq+ 105041 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRCC-TMED5 PRCC chr1 156768239 + TMED5 chr1 93160226 - Exonic hg38 THCA TCGA-ET-A40S-01A 6 28 In-Frame Intra-chr q23.1 p22.1 Seq+ 105042 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 59906122 - RET chr10 43116584 + Exonic hg38 THCA TCGA-ET-A40T-01A 26 92 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 105043 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRR16-IGKJ2 PRR16 chr5 120465682 + IGKJ2 chr2 88861556 - Exonic hg38 THCA TCGA-FE-A230-01A 30 0 Out-of-frame Inter-chr q23.1 p11.2 105044 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPCN1-GNB1 TPCN1 chr12 113226964 + GNB1 chr1 1825499 - Exonic hg38 THCA TCGA-FE-A233-01A 2 1 5'UTR-5'UTR Inter-chr q24.13 p36.33 105045 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPZ1-C19orf18 COPZ1 chr12 54347844 + C19orf18 chr19 57961551 - Exonic hg38 THCA TCGA-FE-A235-01A 1 2 In-Frame Inter-chr q13.13 q13.43 105046 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2AK4-HMGN2P46 EIF2AK4 chr15 39949268 + HMGN2P46 chr15 45555490 + Exonic hg38 THCA TCGA-FE-A239-01A 8 98 CDS-5'UTR Intra-chr q15.1 q21.1 Seq+ 105047 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMBRD1-LGSN LMBRD1 chr6 69718956 - LGSN chr6 63295045 - Exonic hg38 THCA TCGA-FE-A239-01A 9 38 In-Frame Intra-chr q13 q12 Seq+ 105048 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL30-CTSB MRPL30 chr2 99196251 + CTSB chr8 11842955 - Exonic hg38 THCA TCGA-FE-A3PC-01A 1000 1000 Out-of-frame Inter-chr q11.2 p23.1 105049 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETV6-NTRK3 ETV6 chr12 11853561 + NTRK3 chr15 88033045 - Exonic hg38 THCA TCGA-FE-A3PD-01A 9 71 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 105050 ChimerSeq TCGA FAWG TCGA_RNA-Seq MET-TFG MET chr7 116771989 + TFG chr3 100736576 + Exonic hg38 THCA TCGA-FK-A3S3-01A 372 1867 In-Frame Inter-chr q31.2 TK:Met Oncogene q12.2 Seq+ 105051 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFG-MET TFG chr3 100732672 + MET chr7 116774881 + Exonic hg38 THCA TCGA-FK-A3S3-01A 3 26 In-Frame Inter-chr q12.2 q31.2 TK:Met Oncogene KB Pub Seq+ 105052 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 59906122 - RET chr10 43116584 + Exonic hg38 THCA TCGA-FK-A3SE-01A 79 276 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 105053 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKAP13-RET AKAP13 chr15 85741495 + RET chr10 43116584 + Exonic hg38 THCA TCGA-FK-A3SG-01A 72 291 In-Frame Inter-chr q25.3 q11.21 TK:Ret Oncogene Seq+ 105054 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 59906122 - RET chr10 43116584 + Exonic hg38 THCA TCGA-FK-A4UB-01A 1 8 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 105055 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIX-GATAD2A NFIX chr19 13074026 + GATAD2A chr19 19492306 + Exonic hg38 THCA TCGA-FY-A2QD-01A 10 31 In-Frame Intra-chr p13.13 Transcription factor p13.11 Transcription factor Seq+ 105056 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELSR2-SORT1 CELSR2 chr1 109273670 + SORT1 chr1 109312285 - Exonic hg38 THCA TCGA-FY-A3ON-01A 1000 1000 CDS-3'UTR Intra-chr p13.3 p13.3 105057 ChimerSeq TCGA FAWG TCGA_RNA-Seq UACA-LTK UACA chr15 70664662 - LTK chr15 41507174 - Exonic hg38 THCA TCGA-FY-A3R6-01A 9 74 Out-of-frame Intra-chr q23 q15.1 TK:ALK Oncogene Seq+ 105058 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBX5-TXNRD2 CBX5 chr12 54241744 - TXNRD2 chr22 19931098 - Exonic hg38 THCA TCGA-FY-A3WA-01A 6 39 3'UTR-3'UTR Inter-chr q13.13 Tumor suppressor gene q11.21 Seq+ 105059 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL9A3-ACTG1 COL9A3 chr20 62832189 + ACTG1 chr17 81510329 - Exonic hg38 THCA TCGA-FY-A3WA-01A 1 12 CDS-3'UTR Inter-chr q13.33 q25.3 105060 ChimerSeq TCGA FAWG TCGA_RNA-Seq LLGL1-ALKBH5 LLGL1 chr17 18232802 + ALKBH5 chr17 18206815 + Exonic hg38 THCA TCGA-FY-A40L-01A 8 37 3'UTR-CDS Intra-chr Tumor suppressor gene p11.2 Seq+ 105061 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRAF-SUGCT BRAF chr7 140924566 - SUGCT chr7 40749434 + Exonic hg38 THCA TCGA-FY-A40N-01A 16 303 In-Frame Intra-chr q34 TKL:RAF Oncogene p14.1 105062 ChimerSeq TCGA FAWG TCGA_RNA-Seq SND1-BRAF SND1 chr7 127721400 + BRAF chr7 140787584 - Exonic hg38 THCA TCGA-FY-A40N-01A 8 20 In-Frame Intra-chr q32.1 q34 TKL:RAF Oncogene KB Pub Seq+ 105063 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCC-ATG10 MCC chr5 113294329 - ATG10 chr5 82276145 + Exonic hg38 THCA TCGA-FY-A4B0-01A 1 8 CDS-3'UTR Intra-chr q22.2 Tumor suppressor gene q14.1 105064 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM94-GNAS TMEM94 chr17 75456751 + GNAS chr20 58895612 + Exonic hg38 THCA TCGA-H2-A2K9-01A 2 4 5'UTR-5'UTR Inter-chr q25.1 q13.32 Oncogene 105065 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHPT1-GNPTAB CHPT1 chr12 101742507 + GNPTAB chr12 101796540 - Exonic hg38 THCA TCGA-H2-A3RI-01A 1000 1000 Out-of-frame Intra-chr q23.2 q23.2 105066 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKRN1-BRAF MKRN1 chr7 140459007 - BRAF chr7 140787584 - Exonic hg38 THCA TCGA-J8-A3O1-01A 14 49 In-Frame Intra-chr q34 q34 TKL:RAF Oncogene KB Pub Seq+ 105067 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC6-RET CCDC6 chr10 59906122 - RET chr10 43116584 + Exonic hg38 THCA TCGA-J8-A4HW-01A 24 147 In-Frame Intra-chr q21.2 q11.21 TK:Ret Oncogene KB Pub Seq+ 105068 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRAF-SND1 BRAF chr7 140794308 - SND1 chr7 128074502 + Exonic hg38 THCA TCGA-KS-A41I-01A 2 1 In-Frame Intra-chr q34 TKL:RAF Oncogene q32.1 Seq+ 105069 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3HAV1-BRAF ZC3HAV1 chr7 139073856 - BRAF chr7 140781693 - Exonic hg38 THCA TCGA-KS-A4ID-01A 3 15 In-Frame Intra-chr q34 q34 TKL:RAF Oncogene Seq+ 105070 ChimerSeq TCGA FAWG TCGA_RNA-Seq PICK1-CTSB PICK1 chr22 38067548 + CTSB chr8 11843554 - Exonic hg38 THCA TCGA-MK-A84Z-01A 1000 1000 Out-of-frame Inter-chr q13.1 p23.1 105071 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTMA-PRSS16 PTMA chr2 231712956 + PRSS16 chr6 27247723 + Exonic hg38 THYM TCGA-3G-AB19-01A 1000 1000 Out-of-frame Inter-chr q37.1 p22.1 105072 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEAD4-TSPAN9 TEAD4 chr12 2960040 + TSPAN9 chr12 3278421 + Exonic hg38 THYM TCGA-3S-A8YW-01A 1 4 5'UTR-CDS Intra-chr p13.33 Transcription factor p13.33 105073 ChimerSeq TCGA FAWG TCGA_RNA-Seq PNMAL1-PPP5D1 PNMAL1 chr19 46470993 - PPP5D1 chr19 46482215 - Exonic hg38 THYM TCGA-4V-A9QJ-01A 12 166 Out-of-frame Intra-chr q13.32 Seq+ 105074 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPSTI1-TSC22D1 EPSTI1 chr13 42991978 - TSC22D1 chr13 44436095 - Exonic hg38 THYM TCGA-4V-A9QJ-01A 3 15 In-Frame Intra-chr q14.11 q14.11 Tumor suppressor gene Transcription factor Seq+ 105075 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELL-RABGGTA ELL chr19 18446748 - RABGGTA chr14 24271169 - Exonic hg38 THYM TCGA-4V-A9QJ-01A 2 9 CDS-5'UTR Inter-chr p13.11 q12 Seq+ 105076 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARP4-CERS1 PARP4 chr13 24434395 - CERS1 chr19 18869390 - Exonic hg38 THYM TCGA-4V-A9QJ-01A 2 6 CDS-3'UTR Inter-chr q12.12 p13.11 Seq+ 105077 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARP4-GDF1 PARP4 chr13 24434395 - GDF1 chr19 18869390 - Exonic hg38 THYM TCGA-4V-A9QJ-01A 2 6 Out-of-frame Inter-chr q12.12 p13.11 Seq+ 105078 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCL25-AR CCL25 chr19 8062575 + AR chrX 67545134 + Exonic hg38 THYM TCGA-4V-A9QR-01A 7 0 Out-of-frame Inter-chr p13.2 q12 Oncogene Tumor suppressor gene Transcription factor Seq+ 105079 ChimerSeq TCGA FAWG TCGA_RNA-Seq NADSYN1-10 NADSYN1 chr11 71524107 + 10 chr11 71566107 + Exonic hg38 THYM TCGA-4X-A9FA-01A 1000 1000 Out-of-frame Intra-chr q13.4 105080 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM83F-BAIAP2L2 FAM83F chr22 39995531 + BAIAP2L2 chr22 38098482 - Exonic hg38 THYM TCGA-5K-AAAP-01A 16 51 In-Frame Intra-chr q13.1 q13.1 Seq+ 105081 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED26-GADD45GIP1 MED26 chr19 16627872 - GADD45GIP1 chr19 12954526 - Exonic hg38 THYM TCGA-5U-AB0D-01A 22 43 Out-of-frame Intra-chr p13.11 p13.13 Tumor suppressor gene Seq+ 105082 ChimerSeq TCGA FAWG TCGA_RNA-Seq NR2C2-FGD5 NR2C2 chr3 14962492 + FGD5 chr3 14932577 + Exonic hg38 THYM TCGA-5U-AB0D-01A 1 5 5'UTR-CDS Intra-chr p25.1 Tumor suppressor gene Transcription factor p25.1 Seq+ 105083 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAFAH2-STMN1 PAFAH2 chr1 25961697 - STMN1 chr1 25904739 - Exonic hg38 THYM TCGA-X7-A8D6-01A 1000 1000 Out-of-frame Intra-chr p36.11 p36.11 105084 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN10-COL16A1 ATXN10 chr22 45672179 + COL16A1 chr1 31692509 - Exonic hg38 THYM TCGA-X7-A8D9-01A 3 26 Out-of-frame Inter-chr q13.31 p35.2 Seq+ 105085 ChimerSeq TCGA FAWG TCGA_RNA-Seq NADK-HNRNPR NADK chr1 1778289 - HNRNPR chr1 23338608 - Exonic hg38 THYM TCGA-X7-A8D9-01A 2 7 5'UTR-5'UTR Intra-chr p36.33 Seq+ 105086 ChimerSeq TCGA FAWG TCGA_RNA-Seq NADSYN1-10 NADSYN1 chr11 71521204 + 10 chr11 71566120 + Exonic hg38 THYM TCGA-X7-A8DE-01A 1000 1000 Out-of-frame Intra-chr q13.4 105087 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAMP1-PPP1R7 RAMP1 chr2 237877362 + PPP1R7 chr2 241157807 + Exonic hg38 THYM TCGA-XH-A853-01A 1 4 Out-of-frame Intra-chr q37.3 q37.3 105088 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIMK2-MED15 LIMK2 chr22 31225819 + MED15 chr22 20537117 + Exonic hg38 THYM TCGA-XM-A8R9-01A 3 7 In-Frame Intra-chr q12.2 TKL:LISK q11.21 Seq+ 105089 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRELD1-JAGN1 CRELD1 chr3 9938163 + JAGN1 chr3 9893202 + Exonic hg38 THYM TCGA-XM-A8RE-01A 13 22 Out-of-frame Intra-chr p25.3 p25.3 Seq+ 105090 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSPL-TNRC6B CTDSPL chr3 37947211 + TNRC6B chr22 40321090 + Exonic hg38 THYM TCGA-XM-A8RF-01A 3 5 In-Frame Inter-chr p22.2 Tumor suppressor gene q13.1 Seq+ 105091 ChimerSeq TCGA FAWG TCGA_RNA-Seq NADSYN1-10 NADSYN1 chr11 71524107 + 10 chr11 71566107 + Exonic hg38 THYM TCGA-XM-AAZ3-01A 1000 1000 Out-of-frame Intra-chr q13.4 105092 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBNO2-NANOS3 SBNO2 chr19 1147309 - NANOS3 chr19 13880442 + Exonic hg38 THYM TCGA-XU-A92V-01A 10 53 5'UTR-5'UTR Intra-chr p13.3 p13.12 Seq+ 105093 ChimerSeq TCGA FAWG TCGA_RNA-Seq DAZAP1-SBNO2 DAZAP1 chr19 1422396 + SBNO2 chr19 1127765 - Exonic hg38 THYM TCGA-XU-A92V-01A 5 19 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 105094 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRFIP1-CARD10 LRRFIP1 chr2 237760205 + CARD10 chr22 37519217 - Exonic hg38 THYM TCGA-XU-A92V-01A 1 5 CDS-5'UTR Inter-chr q37.3 q13.1 Seq+ 105095 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFIA-CDK2AP1 NFIA chr1 61406727 + CDK2AP1 chr12 123267282 - Exonic hg38 THYM TCGA-XU-A92Z-01A 56 158 In-Frame Inter-chr p31.3 Transcription factor q24.31 Tumor suppressor gene Seq+ 105096 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB40-TMEM57 ZBTB40 chr1 22490645 + TMEM57 chr1 25498264 + Exonic hg38 THYM TCGA-YT-A95D-01A 4 18 Out-of-frame Intra-chr p36.12 Transcription factor p36.11 Seq+ 105097 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAI1-ATP5G1 RAI1 chr17 17724159 + ATP5G1 chr17 48894372 + Exonic hg38 THYM TCGA-ZB-A961-01A 4 21 Out-of-frame Intra-chr p11.2 q21.32 Seq+ 105098 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC5-SLC13A2 HDAC5 chr17 44110729 - SLC13A2 chr17 28489214 + Exonic hg38 THYM TCGA-ZB-A961-01A 5 13 Out-of-frame Intra-chr q21.31 q11.2 Seq+ 105099 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPEPPS-HDAC5 NPEPPS chr17 47545993 + HDAC5 chr17 44093834 - Exonic hg38 THYM TCGA-ZB-A961-01A 3 1 In-Frame Intra-chr q21.32 q21.31 Seq+ 105100 ChimerSeq TCGA FAWG TCGA_RNA-Seq CWC25-FAM134C CWC25 chr17 38820901 - FAM134C chr17 42592162 - Exonic hg38 THYM TCGA-ZB-A961-01A 1 4 Out-of-frame Intra-chr q12 Seq+ 105101 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL27-NBR1 RPL27 chr17 42998831 + NBR1 chr17 43196481 + Exonic hg38 THYM TCGA-ZB-A962-01A 1 1 Out-of-frame Intra-chr q21.31 q21.31 105102 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF74-ZNRF3 ZNF74 chr22 20394662 + ZNRF3 chr22 29048389 + Exonic hg38 THYM TCGA-ZB-A963-01A 5 3 Out-of-frame Intra-chr q11.21 Transcription factor q12.1 Seq+ 105103 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBLN1-P2RX6P FBLN1 chr22 45550615 + P2RX6P chr22 21044299 - Exonic hg38 THYM TCGA-ZB-A963-01A 1 18 CDS-5'UTR Intra-chr q13.31 Tumor suppressor gene q11.21 105104 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYB5R4-RIPPLY2 CYB5R4 chr6 83864328 + RIPPLY2 chr6 83857242 + Exonic hg38 THYM TCGA-ZB-A966-01A 3 6 Out-of-frame Intra-chr q14.2 q14.2 Seq+ 105105 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITSN1-MAP3K7CL ITSN1 chr21 33642713 + MAP3K7CL chr21 29159941 + Exonic hg38 THYM TCGA-ZB-A969-01A 99 233 5'UTR-5'UTR Intra-chr q22.11 q21.3 Seq+ 105106 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXP1-FHIT FOXP1 chr3 71299820 - FHIT chr3 59752321 - Exonic hg38 THYM TCGA-ZB-A969-01A 3 66 5'UTR-CDS Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor p14.2 Tumor suppressor gene Seq+ 105107 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM193A-RGS12 FAM193A chr4 2639859 + RGS12 chr4 3414072 + Exonic hg38 THYM TCGA-ZB-A969-01A 6 28 Out-of-frame Intra-chr p16.3 p16.3 Seq+ 105108 ChimerSeq TCGA FAWG TCGA_RNA-Seq POU2F1-ZFYVE28 POU2F1 chr1 167220958 + ZFYVE28 chr4 2320271 - Exonic hg38 THYM TCGA-ZB-A969-01A 2 30 Out-of-frame Inter-chr q24.2 Transcription factor p16.3 Seq+ 105109 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRDM2-LRRC38 PRDM2 chr1 13749487 + LRRC38 chr1 13476099 - Exonic hg38 THYM TCGA-ZB-A969-01A 3 12 In-Frame Intra-chr p36.21 Tumor suppressor gene Transcription factor p36.21 Seq+ 105110 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD6-SPEN CHD6 chr20 41618340 - SPEN chr1 15872816 + Exonic hg38 THYM TCGA-ZB-A969-01A 2 4 5'UTR-CDS Inter-chr q12 p36.21 Transcription factor Seq+ 105111 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRK3-SYCE3 GRK3 chr22 25604453 + SYCE3 chr22 50556405 - Exonic hg38 THYM TCGA-ZB-A96A-01A 2 2 5'UTR-5'UTR Intra-chr q12.1 q13.33 105112 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACO2-ISX ACO2 chr22 41469182 + ISX chr22 35082518 + Exonic hg38 THYM TCGA-ZB-A96G-01A 4 2 5'UTR-CDS Intra-chr q13.2 q12.3 Transcription factor Seq+ 105113 ChimerSeq TCGA FAWG TCGA_RNA-Seq VASP-C1orf87 VASP chr19 45507776 + C1orf87 chr1 60041131 - Exonic hg38 THYM TCGA-ZB-A96H-01A 9 9 Out-of-frame Inter-chr q13.32 p32.1 Seq+ 105114 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM6-DOCK3 RBM6 chr3 49940225 + DOCK3 chr3 50841675 + Exonic hg38 THYM TCGA-ZB-A96L-01A 132 372 5'UTR-CDS Intra-chr p21.31 Tumor suppressor gene p21.2 Seq+ 105115 ChimerSeq TCGA FAWG TCGA_RNA-Seq IP6K2-ALOX12P1 IP6K2 chr3 48717157 - ALOX12P1 chr17 30530308 + Exonic hg38 THYM TCGA-ZB-A96L-01A 87 39 Out-of-frame Inter-chr p21.31 q11.2 Seq+ 105116 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD2-AMZ2 BTBD2 chr19 2015297 - AMZ2 chr17 68248640 + Exonic hg38 THYM TCGA-ZB-A96L-01A 46 114 CDS-5'UTR Inter-chr p13.3 q24.2 Seq+ 105117 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO18A-BCAS3 MYO18A chr17 29165942 - BCAS3 chr17 60910532 + Exonic hg38 THYM TCGA-ZB-A96L-01A 21 42 In-Frame Intra-chr q11.2 Oncogene q23.2 Seq+ 105118 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPHA3-ABCA9 EPHA3 chr3 89431359 + ABCA9 chr17 69051139 - Exonic hg38 THYM TCGA-ZB-A96L-01A 5 14 CDS-5'UTR Inter-chr p11.1 Oncogene Tumor suppressor gene q24.2 Seq+ 105119 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK3-TMIGD2 DOCK3 chr3 50934077 + TMIGD2 chr19 4294816 - Exonic hg38 THYM TCGA-ZB-A96L-01A 2 25 Out-of-frame Inter-chr p21.2 p13.3 Seq+ 105120 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKAR2A-CACNA2D3 PRKAR2A chr3 48847335 - CACNA2D3 chr3 54503492 + Exonic hg38 THYM TCGA-ZB-A96L-01A 3 13 Out-of-frame Intra-chr p21.31 p21.1 Tumor suppressor gene Seq+ 105121 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTSS1L-PDXDC2P MTSS1L chr16 70677792 - PDXDC2P chr16 70031968 - Exonic hg38 THYM TCGA-ZB-A96L-01A 3 12 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 105122 ChimerSeq TCGA FAWG TCGA_RNA-Seq PXK-USP4 PXK chr3 58333090 + USP4 chr3 49294598 - Exonic hg38 THYM TCGA-ZB-A96L-01A 1 9 Out-of-frame Intra-chr p14.3 p21.31 105123 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALDH3A1-NF1 ALDH3A1 chr17 19748259 - NF1 chr17 31258344 + Exonic hg38 THYM TCGA-ZB-A96L-01A 1 3 5'UTR-CDS Intra-chr p11.2 q11.2 Oncogene Tumor suppressor gene Seq+ 105124 ChimerSeq TCGA FAWG TCGA_RNA-Seq HYAL2-SEMA3B HYAL2 chr3 50318956 - SEMA3B chr3 50269161 + Exonic hg38 THYM TCGA-ZB-A96L-01A 1 3 CDS-5'UTR Intra-chr p21.31 p21.31 Tumor suppressor gene 105125 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKAR2A-USP4 PRKAR2A chr3 48790544 - USP4 chr3 49324763 - Exonic hg38 THYM TCGA-ZB-A96L-01A 1 2 In-Frame Intra-chr p21.31 p21.31 105126 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARA-CERS4 RARA chr17 40318448 + CERS4 chr19 8251076 + Exonic hg38 UCEC TCGA-2E-A9G8-01A 21 111 5'UTR-5'UTR Inter-chr q21.2 Oncogene Transcription factor p13.2 Seq+ 105127 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPPL2B-GALK1 SPPL2B chr19 2351594 + GALK1 chr17 75751737 - Exonic hg38 UCEC TCGA-2E-A9G8-01A 4 35 CDS-3'UTR Inter-chr p13.3 q25.1 Seq+ 105128 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRU-KAZN PTPRU chr1 29275756 + KAZN chr1 14304590 + Exonic hg38 UCEC TCGA-2E-A9G8-01A 4 3 CDS-5'UTR Intra-chr p35.3 p36.21 Seq+ 105129 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF148-SLC41A3 ZNF148 chr3 125277726 - SLC41A3 chr3 126026479 - Exonic hg38 UCEC TCGA-2E-A9G8-01A 1 12 Out-of-frame Intra-chr q21.2 Transcription factor q21.3 105130 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2K-WDR19 UBE2K chr4 39755739 + WDR19 chr4 39244248 + Exonic hg38 UCEC TCGA-2E-A9G8-01A 2 2 Out-of-frame Intra-chr p14 p14 Seq+ 105131 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGFR2-SHTN1 FGFR2 chr10 121483698 - SHTN1 chr10 116948997 - Exonic hg38 UCEC TCGA-5B-A90C-01A 128 1067 In-Frame Intra-chr q26.13 TK:FGFR Oncogene q25.3 Pub Seq+ 105132 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDHD1-DLGAP5 WDHD1 chr14 55026711 - DLGAP5 chr14 55154806 - Exonic hg38 UCEC TCGA-5B-A90C-01A 79 195 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 105133 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT9-ARPC2 CNOT9 chr2 218568978 + ARPC2 chr2 218238664 + Exonic hg38 UCEC TCGA-5B-A90C-01A 16 290 Out-of-frame Intra-chr q35 q35 105134 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF2-PAQR6 ARHGEF2 chr1 155965303 - PAQR6 chr1 156244403 - Exonic hg38 UCEC TCGA-5B-A90C-01A 33 210 In-Frame Intra-chr q22 q22 Seq+ 105135 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED1-GSDMB MED1 chr17 39419717 - GSDMB chr17 39906271 - Exonic hg38 UCEC TCGA-5B-A90C-01A 38 168 In-Frame Intra-chr q12 Tumor suppressor gene q21.1 Seq+ 105136 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMIZ1-C10orf11 ZMIZ1 chr10 79119024 + C10orf11 chr10 76036008 + Exonic hg38 UCEC TCGA-5B-A90C-01A 16 129 Out-of-frame Intra-chr q22.3 Seq+ 105137 ChimerSeq TCGA FAWG TCGA_RNA-Seq STON2-RPGRIP1 STON2 chr14 81370988 - RPGRIP1 chr14 21287939 + Exonic hg38 UCEC TCGA-5B-A90C-01A 11 8 CDS-5'UTR Intra-chr q31.1 q11.2 Seq+ 105138 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM1L-FGD4 DNM1L chr12 32731943 + FGD4 chr12 32638655 + Exonic hg38 UCEC TCGA-5B-A90C-01A 4 30 In-Frame Intra-chr p11.21 p11.21 Seq+ 105139 ChimerSeq TCGA FAWG TCGA_RNA-Seq NR2F6-PLVAP NR2F6 chr19 17240671 - PLVAP chr19 17366195 - Exonic hg38 UCEC TCGA-5B-A90C-01A 7 13 Out-of-frame Intra-chr p13.11 Transcription factor p13.11 Seq+ 105140 ChimerSeq TCGA FAWG TCGA_RNA-Seq EYA2-SLC2A10 EYA2 chr20 47016297 + SLC2A10 chr20 46725041 + Exonic hg38 UCEC TCGA-5B-A90C-01A 5 19 In-Frame Intra-chr q13.12 q13.12 Seq+ 105141 ChimerSeq TCGA FAWG TCGA_RNA-Seq KEAP1-AP1M2 KEAP1 chr19 10486748 - AP1M2 chr19 10579858 - Exonic hg38 UCEC TCGA-5B-A90C-01A 3 21 In-Frame Intra-chr p13.2 Oncogene p13.2 Seq+ 105142 ChimerSeq TCGA FAWG TCGA_RNA-Seq GBF1-SFTPD GBF1 chr10 102245781 + SFTPD chr10 79938228 - Exonic hg38 UCEC TCGA-5B-A90C-01A 4 10 5'UTR-CDS Intra-chr q24.32 q22.3 Seq+ 105143 ChimerSeq TCGA FAWG TCGA_RNA-Seq EML4-PKDCC EML4 chr2 42326252 + PKDCC chr2 42053239 + Exonic hg38 UCEC TCGA-5B-A90C-01A 4 9 Out-of-frame Intra-chr p21 Oncogene p21 Seq+ 105144 ChimerSeq TCGA FAWG TCGA_RNA-Seq DHX34-SAE1 DHX34 chr19 47362693 + SAE1 chr19 47209159 + Exonic hg38 UCEC TCGA-5B-A90C-01A 3 11 In-Frame Intra-chr q13.32 q13.32 Seq+ 105145 ChimerSeq TCGA FAWG TCGA_RNA-Seq GEMIN2-CTAGE5 GEMIN2 chr14 39132068 + CTAGE5 chr14 39276934 + Exonic hg38 UCEC TCGA-5B-A90C-01A 4 5 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 105146 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB11FIP3-PLEC RAB11FIP3 chr16 482736 + PLEC chr8 143938692 - Exonic hg38 UCEC TCGA-5B-A90C-01A 4 5 3'UTR-CDS Inter-chr q24.3 Seq+ 105147 ChimerSeq TCGA FAWG TCGA_RNA-Seq HAPLN3-RLBP1 HAPLN3 chr15 88887175 - RLBP1 chr15 89219075 - Exonic hg38 UCEC TCGA-5B-A90C-01A 2 8 CDS-5'UTR Intra-chr q26.1 q26.1 Seq+ 105148 ChimerSeq TCGA FAWG TCGA_RNA-Seq HTR7-C10orf11 HTR7 chr10 90857133 - C10orf11 chr10 76036008 + Exonic hg38 UCEC TCGA-5B-A90C-01A 1 7 Out-of-frame Intra-chr q23.31 Seq+ 105149 ChimerSeq TCGA FAWG TCGA_RNA-Seq C11orf80-FAM171A1 C11orf80 chr11 66816199 + FAM171A1 chr10 15221060 - Exonic hg38 UCEC TCGA-5B-A90C-01A 1 5 In-Frame Inter-chr q13.2 p13 105150 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCSAP-ABCB10 CCSAP chr1 229342099 - ABCB10 chr1 229547701 - Exonic hg38 UCEC TCGA-5B-A90C-01A 1 5 In-Frame Intra-chr q42.13 q42.13 105151 ChimerSeq TCGA FAWG TCGA_RNA-Seq C11orf84-TRPT1 C11orf84 chr11 63819002 + TRPT1 chr11 64225869 - Exonic hg38 UCEC TCGA-5B-A90C-01A 1 4 Out-of-frame Intra-chr q13.1 q13.1 105152 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP164-SIDT2 CEP164 chr11 117382942 + SIDT2 chr11 117188708 + Exonic hg38 UCEC TCGA-5B-A90C-01A 1 4 Out-of-frame Intra-chr q23.3 q23.3 Seq+ 105153 ChimerSeq TCGA FAWG TCGA_RNA-Seq SORBS1-TCTN3 SORBS1 chr10 95397220 - TCTN3 chr10 95664300 - Exonic hg38 UCEC TCGA-5B-A90C-01A 1 3 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 105154 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF790-ATP4A ZNF790 chr19 36850002 - ATP4A chr19 35553182 - Exonic hg38 UCEC TCGA-A5-A1OH-01A 37 96 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.12 Seq+ 105155 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGAP1-PACRG AGAP1 chr2 235883449 + PACRG chr6 163314827 + Exonic hg38 UCEC TCGA-A5-A1OH-01A 15 62 Out-of-frame Inter-chr q37.2 q26 Tumor suppressor gene Seq+ 105156 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D15-TRHDE TBC1D15 chr12 71907138 + TRHDE chr12 72286681 + Exonic hg38 UCEC TCGA-A5-A1OH-01A 13 26 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 105157 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSSC4-LSP1 TSSC4 chr11 2400798 + LSP1 chr11 1880087 + Exonic hg38 UCEC TCGA-A5-A1OH-01A 16 13 5'UTR-5'UTR Intra-chr p15.5 Tumor suppressor gene p15.5 Seq+ 105158 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSSC4-MIR7847 TSSC4 chr11 2400798 + MIR7847 chr11 1880087 + Exonic hg38 UCEC TCGA-A5-A1OH-01A 16 5 5'UTR-5'UTR Intra-chr p15.5 Tumor suppressor gene p15.5 105159 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX19-RRP12 SNX19 chr11 130914266 - RRP12 chr10 97370796 - Exonic hg38 UCEC TCGA-A5-A1OH-01A 4 41 In-Frame Inter-chr q25 q24.1 Seq+ 105160 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGA2-KALRN HMGA2 chr12 65951415 + KALRN chr3 124562843 + Exonic hg38 UCEC TCGA-A5-A1OH-01A 2 40 In-Frame Inter-chr q14.3 Transcription factor q21.1 Seq+ 105161 ChimerSeq TCGA FAWG TCGA_RNA-Seq KALRN-CREB5 KALRN chr3 124633953 + CREB5 chr7 28488175 + Exonic hg38 UCEC TCGA-A5-A1OH-01A 4 12 In-Frame Inter-chr q21.1 p15.1 Transcription factor Seq+ 105162 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC22A23-SMIM13 SLC22A23 chr6 3455906 - SMIM13 chr6 11134403 + Exonic hg38 UCEC TCGA-A5-A1OH-01A 2 13 Out-of-frame Intra-chr p25.2 p24.2 Seq+ 105163 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRYBB2P1-SPECC1L CRYBB2P1 chr22 25455840 + SPECC1L chr22 24411588 + Exonic hg38 UCEC TCGA-A5-A1OH-01A 1 13 5'UTR-CDS Intra-chr q11.23 q11.23 105164 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCY1-HNRNPA2B1 ADCY1 chr7 45610497 + HNRNPA2B1 chr7 26197732 - Exonic hg38 UCEC TCGA-A5-A1OH-01A 2 2 Out-of-frame Intra-chr p12.3 p15.2 Seq+ 105165 ChimerSeq TCGA FAWG TCGA_RNA-Seq COPZ1-HOXC9 COPZ1 chr12 54325181 + HOXC9 chr12 54002430 + Exonic hg38 UCEC TCGA-A5-A2K2-01A 42 20 Out-of-frame Intra-chr q13.13 q13.13 Transcription factor Seq+ 105166 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNF-NPW CCNF chr16 2457016 + NPW chr16 2020533 + Exonic hg38 UCEC TCGA-A5-A2K2-01A 13 72 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 105167 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB11FIP4-NPLOC4 RAB11FIP4 chr17 31488272 + NPLOC4 chr17 81572088 - Exonic hg38 UCEC TCGA-A5-A2K2-01A 5 28 In-Frame Intra-chr q11.2 q25.3 Seq+ 105168 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALK-GALNT14 ALK chr2 29296888 - GALNT14 chr2 30929487 - Exonic hg38 UCEC TCGA-A5-A2K2-01A 5 10 In-Frame Intra-chr p23.1 TK:ALK Oncogene p23.1 Seq+ 105169 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATC-BICDL1 GATC chr12 120457179 + BICDL1 chr12 120061710 + Exonic hg38 UCEC TCGA-A5-A2K2-01A 6 5 Out-of-frame Intra-chr q24.31 q24.23 105170 ChimerSeq TCGA FAWG TCGA_RNA-Seq PXN-GATC PXN chr12 120265617 - GATC chr12 120457076 + Exonic hg38 UCEC TCGA-A5-A2K2-01A 2 12 Out-of-frame Intra-chr q24.23 q24.31 Seq+ 105171 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM2-C19orf38 DNM2 chr19 10718403 + C19orf38 chr19 10856265 + Exonic hg38 UCEC TCGA-A5-A2K2-01A 1 13 Out-of-frame Intra-chr p13.2 p13.2 105172 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL3-ZNF233 BCL3 chr19 44757723 + ZNF233 chr19 44272899 + Exonic hg38 UCEC TCGA-A5-A2K2-01A 2 5 Out-of-frame Intra-chr q13.32 Oncogene q13.31 Transcription factor Seq+ 105173 ChimerSeq TCGA FAWG TCGA_RNA-Seq EML3-ATL3 EML3 chr11 62603729 - ATL3 chr11 63633097 - Exonic hg38 UCEC TCGA-A5-A2K2-01A 1 8 Out-of-frame Intra-chr q12.3 q13.1 Seq+ 105174 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF410-ACOT4 ZNF410 chr14 73923522 + ACOT4 chr14 73593702 + Exonic hg38 UCEC TCGA-A5-A2K2-01A 1 8 Out-of-frame Intra-chr q24.3 Transcription factor q24.3 Seq+ 105175 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABT1-BTN2A3P ABT1 chr6 26597223 + BTN2A3P chr6 26426242 + Exonic hg38 UCEC TCGA-A5-A2K2-01A 1 7 CDS-5'UTR Intra-chr p22.2 p22.2 105176 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF512-ANXA4 ZNF512 chr2 27583142 + ANXA4 chr2 69781520 + Exonic hg38 UCEC TCGA-A5-A2K4-01A 15 45 5'UTR-5'UTR Intra-chr p23.3 Transcription factor p13.3 Seq+ 105177 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO46-ARG2 FBXO46 chr19 45730849 - ARG2 chr14 67642186 + Exonic hg38 UCEC TCGA-A5-A2K4-01A 18 21 5'UTR-5'UTR Inter-chr q13.32 q24.1 Seq+ 105178 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELSR2-SARS CELSR2 chr1 109273670 + SARS chr1 109230878 + Exonic hg38 UCEC TCGA-A5-A2K4-01A 8 21 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 105179 ChimerSeq TCGA FAWG TCGA_RNA-Seq COQ9-CCL17 COQ9 chr16 57452936 + CCL17 chr16 57415081 + Exonic hg38 UCEC TCGA-A5-A2K4-01A 6 23 Out-of-frame Intra-chr q21 q21 Seq+ 105180 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3PXD2A-MAP1S SH3PXD2A chr10 103693028 - MAP1S chr19 17734273 + Exonic hg38 UCEC TCGA-A5-A2K4-01A 6 23 Out-of-frame Inter-chr q24.33 p13.11 Seq+ 105181 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5423441 - RNF216 chr7 5641376 - Exonic hg38 UCEC TCGA-A5-A2K4-01A 5 27 5'UTR-CDS Intra-chr p22.1 p22.1 Seq+ 105182 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRMT11-NCOA7 TRMT11 chr6 125986622 + NCOA7 chr6 125928174 + Exonic hg38 UCEC TCGA-A5-A2K4-01A 3 13 In-Frame Intra-chr q22.32 q22.31 Seq+ 105183 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHD7-EMID1 CHD7 chr8 60801593 + EMID1 chr22 29214926 + Exonic hg38 UCEC TCGA-A5-A2K4-01A 4 7 Out-of-frame Inter-chr q12.2 q12.2 Seq+ 105184 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRP7BP-PACSIN2 RRP7BP chr22 42580217 - PACSIN2 chr22 42912157 - Exonic hg38 UCEC TCGA-A5-A2K4-01A 1 5 3'UTR-5'UTR Intra-chr q13.2 q13.2 105185 ChimerSeq TCGA FAWG TCGA_RNA-Seq THRAP3-KEAP1 THRAP3 chr1 36224505 + KEAP1 chr19 10492262 - Exonic hg38 UCEC TCGA-A5-A2K4-01A 1 5 5'UTR-CDS Inter-chr p34.3 p13.2 Oncogene 105186 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIP2C-APOLD1 DIP2C chr10 689494 - APOLD1 chr12 12812261 + Exonic hg38 UCEC TCGA-A5-A2K4-01A 1 3 CDS-3'UTR Inter-chr p15.3 p13.1 105187 ChimerSeq TCGA FAWG TCGA_RNA-Seq VCL-SAMD8 VCL chr10 74109156 + SAMD8 chr10 75150514 + Exonic hg38 UCEC TCGA-A5-A2K4-01A 1 3 CDS-5'UTR Intra-chr q22.2 q22.2 105188 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF183-CD47 RNF183 chr9 113302195 - CD47 chr3 108047292 - Exonic hg38 UCEC TCGA-A5-A2K5-01A 1 3 5'UTR-CDS Inter-chr q32 q13.12 105189 ChimerSeq TCGA FAWG TCGA_RNA-Seq TECR-PKN1 TECR chr19 14529711 + PKN1 chr19 14469341 + Exonic hg38 UCEC TCGA-A5-A3LP-01A 41 158 Out-of-frame Intra-chr p13.12 p13.12 AGC:PKN Seq+ 105190 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASH1L-IQGAP3 ASH1L chr1 155562153 - IQGAP3 chr1 156531247 - Exonic hg38 UCEC TCGA-A5-A3LP-01A 12 53 5'UTR-CDS Intra-chr q22 Transcription factor q22 Seq+ 105191 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPTOR-CD163 RPTOR chr17 80625793 + CD163 chr12 7502564 - Exonic hg38 UCEC TCGA-A5-A3LP-01A 14 17 In-Frame Inter-chr q25.3 p13.31 Seq+ 105192 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMOD1-TDRD7 TMOD1 chr9 97501803 + TDRD7 chr9 97472293 + Exonic hg38 UCEC TCGA-A5-A3LP-01A 4 4 5'UTR-CDS Intra-chr q22.33 q22.33 Seq+ 105193 ChimerSeq TCGA FAWG TCGA_RNA-Seq MUC1-FAM189B MUC1 chr1 155192183 - FAM189B chr1 155251164 - Exonic hg38 UCEC TCGA-A5-A3LP-01A 1 12 CDS-5'UTR Intra-chr q22 Oncogene Seq+ 105194 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNH1-TOLLIP RNH1 chr11 507113 - TOLLIP chr11 1295794 - Exonic hg38 UCEC TCGA-A5-A3LP-01A 2 6 5'UTR-5'UTR Intra-chr Tumor suppressor gene p15.5 Seq+ 105195 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA0319L-EIF4G3 KIAA0319L chr1 35554350 - EIF4G3 chr1 21089213 - Exonic hg38 UCEC TCGA-A5-A3LP-01A 1 7 CDS-5'UTR Intra-chr p34.3 p36.12 Seq+ 105196 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG2A-ESRRA ATG2A chr11 64900494 - ESRRA chr11 64313951 + Exonic hg38 UCEC TCGA-A5-A3LP-01A 1 5 Out-of-frame Intra-chr q13.1 q13.1 Transcription factor 105197 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPIN2-DLGAP1 LPIN2 chr18 3013087 - DLGAP1 chr18 3880140 - Exonic hg38 UCEC TCGA-A5-A3LP-01A 1 3 5'UTR-5'UTR Intra-chr p11.31 p11.31 Seq+ 105198 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSPL2-CKMT1A CTDSPL2 chr15 44427772 + CKMT1A chr15 43692914 + Exonic hg38 UCEC TCGA-A5-A7WK-01A 108 32 5'UTR-5'UTR Intra-chr q15.3 q15.3 Seq+ 105199 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRC2B-PRCD PRRC2B chr9 131483445 + PRCD chr17 76540505 + Exonic hg38 UCEC TCGA-A5-A7WK-01A 69 116 Out-of-frame Inter-chr q34.13 q25.1 Seq+ 105200 ChimerSeq TCGA FAWG TCGA_RNA-Seq RABL2A-IL36G RABL2A chr2 113633060 + IL36G chr2 112984840 + Exonic hg38 UCEC TCGA-A5-A7WK-01A 38 108 5'UTR-CDS Intra-chr q14.1 q14.1 Seq+ 105201 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFP90-NUTF2 ZFP90 chr16 68539469 + NUTF2 chr16 67865102 + Exonic hg38 UCEC TCGA-A5-A7WK-01A 25 151 5'UTR-5'UTR Intra-chr q22.1 Transcription factor q22.1 Seq+ 105202 ChimerSeq TCGA FAWG TCGA_RNA-Seq MECOM-SLC7A14 MECOM chr3 169663336 - SLC7A14 chr3 170501345 - Exonic hg38 UCEC TCGA-A5-A7WK-01A 25 48 In-Frame Intra-chr q26.2 Transcription factor q26.2 Seq+ 105203 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP188-SPTAN1 NUP188 chr9 128990226 + SPTAN1 chr9 128613381 + Exonic hg38 UCEC TCGA-A5-A7WK-01A 13 70 In-Frame Intra-chr q34.11 q34.11 Seq+ 105204 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIMCH1-UCHL1 LIMCH1 chr4 41524478 + UCHL1 chr4 41256593 + Exonic hg38 UCEC TCGA-A5-A7WK-01A 17 50 5'UTR-5'UTR Intra-chr p13 p13 Tumor suppressor gene Seq+ 105205 ChimerSeq TCGA FAWG TCGA_RNA-Seq LUC7L-STXBP1 LUC7L chr16 206004 - STXBP1 chr9 127663205 + Exonic hg38 UCEC TCGA-A5-A7WK-01A 13 62 In-Frame Inter-chr p13.3 q34.11 Seq+ 105206 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM2B-RHOF KDM2B chr12 121494579 - RHOF chr12 121793239 - Exonic hg38 UCEC TCGA-A5-A7WK-01A 15 53 In-Frame Intra-chr q24.31 Transcription factor q24.31 Seq+ 105207 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIP5K1B-PGM5 PIP5K1B chr9 68822683 + PGM5 chr9 68465093 + Exonic hg38 UCEC TCGA-A5-A7WK-01A 16 49 Out-of-frame Intra-chr q21.11 q21.11 Seq+ 105208 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLGAP4-RGMA DLGAP4 chr20 36461510 + RGMA chr15 93052507 - Exonic hg38 UCEC TCGA-A5-A7WK-01A 18 34 5'UTR-CDS Inter-chr q11.23 q26.1 Seq+ 105209 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR82-UBE4B WDR82 chr3 52270712 - UBE4B chr1 10072028 + Exonic hg38 UCEC TCGA-A5-A7WK-01A 12 44 Out-of-frame Inter-chr p21.2 p36.22 Tumor suppressor gene Seq+ 105210 ChimerSeq TCGA FAWG TCGA_RNA-Seq NXN-SLC43A2 NXN chr17 979319 - SLC43A2 chr17 1615034 - Exonic hg38 UCEC TCGA-A5-A7WK-01A 9 55 CDS-5'UTR Intra-chr p13.3 Seq+ 105211 ChimerSeq TCGA FAWG TCGA_RNA-Seq NTN1-RANGAP1 NTN1 chr17 9023391 + RANGAP1 chr22 41268156 - Exonic hg38 UCEC TCGA-A5-A7WK-01A 8 30 Out-of-frame Inter-chr p13.1 q13.2 Seq+ 105212 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARA-PLEKHA6 RARA chr17 40331396 + PLEKHA6 chr1 204274809 - Exonic hg38 UCEC TCGA-A5-A7WK-01A 5 40 CDS-5'UTR Inter-chr q21.2 Oncogene Transcription factor q32.1 Seq+ 105213 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCC2-CS SMARCC2 chr12 56168060 - CS chr12 56286645 - Exonic hg38 UCEC TCGA-A5-A7WK-01A 8 20 In-Frame Intra-chr q13.2 q13.3 Seq+ 105214 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK1D-ASPSCR1 CSNK1D chr17 82273306 - ASPSCR1 chr17 82016941 + Exonic hg38 UCEC TCGA-A5-A7WK-01A 4 34 Out-of-frame Intra-chr q25.3 q25.3 Seq+ 105215 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFAND3-EXD3 ZFAND3 chr6 37929999 + EXD3 chr9 137354377 - Exonic hg38 UCEC TCGA-A5-A7WK-01A 5 29 Out-of-frame Inter-chr p21.2 q34.3 Seq+ 105216 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX39B-C6orf10 DDX39B chr6 31538763 - C6orf10 chr6 32369983 - Exonic hg38 UCEC TCGA-A5-A7WK-01A 6 22 Out-of-frame Intra-chr Seq+ 105217 ChimerSeq TCGA FAWG TCGA_RNA-Seq STXBP1-CACNA2D2 STXBP1 chr9 127663353 + CACNA2D2 chr3 50381126 - Exonic hg38 UCEC TCGA-A5-A7WK-01A 8 10 Out-of-frame Inter-chr q34.11 p21.31 Seq+ 105218 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP7D1-AGO3 MAP7D1 chr1 36173478 + AGO3 chr1 36004341 + Exonic hg38 UCEC TCGA-A5-A7WK-01A 7 12 In-Frame Intra-chr p34.3 p34.3 Seq+ 105219 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM174B-PHF20 FAM174B chr15 92655316 - PHF20 chr20 35842573 + Exonic hg38 UCEC TCGA-A5-A7WK-01A 5 17 In-Frame Inter-chr q26.1 q11.22 Transcription factor Seq+ 105220 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL24-SLC22A16 METTL24 chr6 110246132 - SLC22A16 chr6 110457017 - Exonic hg38 UCEC TCGA-A5-A7WK-01A 5 16 In-Frame Intra-chr q21 q21 Seq+ 105221 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF1A-C2orf54 KIF1A chr2 240758360 - C2orf54 chr2 240891763 - Exonic hg38 UCEC TCGA-A5-A7WK-01A 4 15 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 105222 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBLIM1-CELA2B FBLIM1 chr1 15758355 + CELA2B chr1 15476457 + Exonic hg38 UCEC TCGA-A5-A7WK-01A 2 20 5'UTR-CDS Intra-chr p36.21 p36.21 Seq+ 105223 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM102A-WDR34 FAM102A chr9 127979992 - WDR34 chr9 128640939 - Exonic hg38 UCEC TCGA-A5-A7WK-01A 3 12 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 105224 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFMBT1-EML1 SFMBT1 chr3 52954317 - EML1 chr14 99891199 + Exonic hg38 UCEC TCGA-A5-A7WK-01A 3 11 Out-of-frame Inter-chr p21.1 q32.2 Seq+ 105225 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM1L-FGD4 DNM1L chr12 32733807 + FGD4 chr12 32619698 + Exonic hg38 UCEC TCGA-A5-A7WK-01A 2 13 In-Frame Intra-chr p11.21 p11.21 Seq+ 105226 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK38-GMDS STK38 chr6 36499873 - GMDS chr6 1742586 - Exonic hg38 UCEC TCGA-A5-A7WK-01A 2 12 Out-of-frame Intra-chr p21.31 p25.3 Seq+ 105227 ChimerSeq TCGA FAWG TCGA_RNA-Seq ICK-FAM83B ICK chr6 53018330 - FAM83B chr6 54870187 + Exonic hg38 UCEC TCGA-A5-A7WK-01A 2 9 CDS-5'UTR Intra-chr p12.1 CMGC:RCK Oncogene p12.1 Seq+ 105228 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL18-RNF216 FBXL18 chr7 5500488 - RNF216 chr7 5652510 - Exonic hg38 UCEC TCGA-A5-A7WK-01A 2 6 Out-of-frame Intra-chr p22.1 p22.1 KB Seq+ 105229 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAZ2B-ITGB6 BAZ2B chr2 159373045 - ITGB6 chr2 160174139 - Exonic hg38 UCEC TCGA-A5-A7WK-01A 1 5 Out-of-frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 105230 ChimerSeq TCGA FAWG TCGA_RNA-Seq MECOM-CLDN11 MECOM chr3 169663336 - CLDN11 chr3 170423163 + Exonic hg38 UCEC TCGA-A5-A7WK-01A 1 3 In-Frame Intra-chr q26.2 Transcription factor q26.2 105231 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN3-LGMN ATXN3 chr14 92070935 - LGMN chr14 92732815 - Exonic hg38 UCEC TCGA-A5-A7WK-01A 1 2 CDS-5'UTR Intra-chr q32.12 q32.12 105232 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASZ1-MTOR CASZ1 chr1 10638715 - MTOR chr1 11199703 - Exonic hg38 UCEC TCGA-A5-A7WK-01A 1 1 3'UTR-CDS Intra-chr p36.22 Transcription factor p36.22 Oncogene Seq+ 105233 ChimerSeq TCGA FAWG TCGA_RNA-Seq PKD1-ZNF598 PKD1 chr16 2135475 - ZNF598 chr16 1999121 - Exonic hg38 UCEC TCGA-A5-A7WK-01A 1000 1000 Out-of-frame Intra-chr p13.3 CAMK:PKD Tumor suppressor gene p13.3 Transcription factor Seq+ 105234 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO42-LAPTM5 FBXO42 chr1 16352255 - LAPTM5 chr1 30742549 - Exonic hg38 UCEC TCGA-AJ-A23N-01A 10 29 5'UTR-CDS Intra-chr p36.13 p35.2 Seq+ 105235 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNC5A-ERGIC1 UNC5A chr5 176810820 + ERGIC1 chr5 172950709 + Exonic hg38 UCEC TCGA-AJ-A23N-01A 7 13 Out-of-frame Intra-chr q35.2 Tumor suppressor gene q35.1 Seq+ 105236 ChimerSeq TCGA FAWG TCGA_RNA-Seq LYPD6-EPC2 LYPD6 chr2 149449147 + EPC2 chr2 148690214 + Exonic hg38 UCEC TCGA-AJ-A23N-01A 7 1 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 105237 ChimerSeq TCGA FAWG TCGA_RNA-Seq NECTIN2-SOX6 NECTIN2 chr19 44874478 + SOX6 chr11 15989230 - Exonic hg38 UCEC TCGA-AJ-A23N-01A 1 12 In-Frame Inter-chr q13.32 p15.2 Transcription factor 105238 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL10-SKAP1 MRPL10 chr17 47826637 - SKAP1 chr17 48189500 - Exonic hg38 UCEC TCGA-AJ-A23N-01A 1 6 In-Frame Intra-chr q21.32 q21.32 105239 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBP-CBLN2 MBP chr18 77105211 - CBLN2 chr18 72552636 - Exonic hg38 UCEC TCGA-AJ-A2QM-01A 25 120 CDS-5'UTR Intra-chr q23 q22.3 Seq+ 105240 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIS3L2-MICU1 DIS3L2 chr2 231961765 + MICU1 chr10 72566794 - Exonic hg38 UCEC TCGA-AJ-A2QM-01A 44 5 5'UTR-5'UTR Inter-chr q37.1 q22.1 Seq+ 105241 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNN1-GATA6 KCNN1 chr19 17975187 + GATA6 chr18 22200656 + Exonic hg38 UCEC TCGA-AJ-A2QM-01A 9 32 In-Frame Inter-chr p13.11 q11.2 Transcription factor Seq+ 105242 ChimerSeq TCGA FAWG TCGA_RNA-Seq SREBF1-ZNF232 SREBF1 chr17 17836727 - ZNF232 chr17 5109868 - Exonic hg38 UCEC TCGA-AJ-A2QM-01A 8 29 Out-of-frame Intra-chr p11.2 Transcription factor p13.2 Transcription factor Seq+ 105243 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBFA-TXNL4A RBFA chr18 80037506 + TXNL4A chr18 79977701 - Exonic hg38 UCEC TCGA-AJ-A2QM-01A 6 33 In-Frame Intra-chr q23 q23 Seq+ 105244 ChimerSeq TCGA FAWG TCGA_RNA-Seq HAPLN4-MEF2B HAPLN4 chr19 19260813 - MEF2B chr19 19150764 - Exonic hg38 UCEC TCGA-AJ-A2QM-01A 5 18 CDS-5'UTR Intra-chr p13.11 p13.11 Transcription factor Seq+ 105245 ChimerSeq TCGA FAWG TCGA_RNA-Seq NAPEPLD-RELN NAPEPLD chr7 103128483 - RELN chr7 103503230 - Exonic hg38 UCEC TCGA-AJ-A2QM-01A 2 20 3'UTR-CDS Intra-chr Tumor suppressor gene q22.1 Seq+ 105246 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDA1-MYO9B DDA1 chr19 17309657 + MYO9B chr19 17200639 + Exonic hg38 UCEC TCGA-AJ-A2QM-01A 3 15 Out-of-frame Intra-chr p13.11 p13.11 Seq+ 105247 ChimerSeq TCGA FAWG TCGA_RNA-Seq AVEN-SCG5 AVEN chr15 34003032 - SCG5 chr15 32679766 + Exonic hg38 UCEC TCGA-AJ-A2QM-01A 1 5 CDS-3'UTR Intra-chr q14 105248 ChimerSeq TCGA FAWG TCGA_RNA-Seq TK1-KMT2D TK1 chr17 78182589 - KMT2D chr12 49034299 - Exonic hg38 UCEC TCGA-AJ-A2QM-01A 1 4 Out-of-frame Inter-chr q25.3 q13.12 Oncogene 105249 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFP30-C19orf33 ZFP30 chr19 37643265 - C19orf33 chr19 38304375 + Exonic hg38 UCEC TCGA-AJ-A3BD-01A 35 155 In-Frame Intra-chr q13.12 Transcription factor q13.2 Seq+ 105250 ChimerSeq TCGA FAWG TCGA_RNA-Seq C12orf10-ESPL1 C12orf10 chr12 53301725 + ESPL1 chr12 53292941 + Exonic hg38 UCEC TCGA-AJ-A3BD-01A 12 71 Out-of-frame Intra-chr q13.13 q13.13 Seq+ 105251 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUPT5H-ARHGEF19 SUPT5H chr19 39474718 + ARHGEF19 chr1 16199254 - Exonic hg38 UCEC TCGA-AJ-A3BD-01A 14 49 Out-of-frame Inter-chr q13.2 p36.13 Seq+ 105252 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1C-SMTNL2 MYO1C chr17 1478616 - SMTNL2 chr17 4607361 + Exonic hg38 UCEC TCGA-AJ-A3BD-01A 3 26 Out-of-frame Intra-chr p13.3 p13.2 Seq+ 105253 ChimerSeq TCGA FAWG TCGA_RNA-Seq RCN3-FLT3LG RCN3 chr19 49539179 + FLT3LG chr19 49486015 + Exonic hg38 UCEC TCGA-AJ-A3BD-01A 2 5 CDS-3'UTR Intra-chr q13.33 q13.33 Seq+ 105254 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGD-RBP7 PGD chr1 10400572 + RBP7 chr1 10007570 + Exonic hg38 UCEC TCGA-AJ-A3BD-01A 1 7 Out-of-frame Intra-chr p36.22 p36.22 105255 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRRG2-AGPAT2 PRRG2 chr19 49583304 + AGPAT2 chr9 136677556 - Exonic hg38 UCEC TCGA-AJ-A3BD-01A 2 3 Out-of-frame Inter-chr q13.33 q34.3 Seq+ 105256 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPYD-ALKBH3 DPYD chr1 97920884 - ALKBH3 chr11 43901516 + Exonic hg38 UCEC TCGA-AJ-A3BD-01A 1 6 In-Frame Inter-chr p21.3 Oncogene p11.2 Seq+ 105257 ChimerSeq TCGA FAWG TCGA_RNA-Seq SF3A1-PES1 SF3A1 chr22 30337026 - PES1 chr22 30577129 - Exonic hg38 UCEC TCGA-AJ-A3BD-01A 1 4 In-Frame Intra-chr q12.2 q12.2 105258 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D16-EIF4A3 TBC1D16 chr17 80035795 - EIF4A3 chr17 80140140 - Exonic hg38 UCEC TCGA-AJ-A3BD-01A 1 3 5'UTR-CDS Intra-chr q25.3 q25.3 105259 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRR4-DUSP16 PRR4 chr12 11171422 - DUSP16 chr12 12521463 - Exonic hg38 UCEC TCGA-AJ-A3BF-01A 47 157 5'UTR-5'UTR Intra-chr Seq+ 105260 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP48-INA USP48 chr1 21782824 - INA chr10 103287035 + Exonic hg38 UCEC TCGA-AJ-A3BF-01A 38 158 Out-of-frame Inter-chr p36.12 q24.33 Seq+ 105261 ChimerSeq TCGA FAWG TCGA_RNA-Seq ECE1-WNT4 ECE1 chr1 21272699 - WNT4 chr1 22121576 - Exonic hg38 UCEC TCGA-AJ-A3BF-01A 33 120 In-Frame Intra-chr p36.12 p36.12 Seq+ 105262 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPS1-BLVRA GPS1 chr17 82051964 + BLVRA chr7 43800465 + Exonic hg38 UCEC TCGA-AJ-A3BF-01A 16 87 Out-of-frame Inter-chr q25.3 p13 Seq+ 105263 ChimerSeq TCGA FAWG TCGA_RNA-Seq CERCAM-STXBP1 CERCAM chr9 128431303 + STXBP1 chr9 127694994 + Exonic hg38 UCEC TCGA-AJ-A3BF-01A 14 79 CDS-3'UTR Intra-chr q34.11 q34.11 Seq+ 105264 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC7-VSTM2B HDAC7 chr12 47819767 - VSTM2B chr19 29527211 + Exonic hg38 UCEC TCGA-AJ-A3BF-01A 20 47 In-Frame Inter-chr q13.11 q12 Seq+ 105265 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPS18A-CDIP1 MRPS18A chr6 43687668 - CDIP1 chr16 4514664 - Exonic hg38 UCEC TCGA-AJ-A3BF-01A 10 85 CDS-5'UTR Inter-chr p21.1 p13.3 Seq+ 105266 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF532-NEDD4L ZNF532 chr18 58918722 + NEDD4L chr18 58350991 + Exonic hg38 UCEC TCGA-AJ-A3BF-01A 10 70 In-Frame Intra-chr q21.32 Transcription factor q21.31 Tumor suppressor gene Seq+ 105267 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUEDC1-COPZ2 CUEDC1 chr17 57885229 - COPZ2 chr17 48033944 - Exonic hg38 UCEC TCGA-AJ-A3BF-01A 9 51 In-Frame Intra-chr q22 q21.32 Seq+ 105268 ChimerSeq TCGA FAWG TCGA_RNA-Seq LETM1-MXD4 LETM1 chr4 1836429 - MXD4 chr4 2258011 - Exonic hg38 UCEC TCGA-AJ-A3BF-01A 5 44 Out-of-frame Intra-chr p16.3 p16.3 Transcription factor Seq+ 105269 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPS1-CENPX GPS1 chr17 82051964 + CENPX chr17 82019909 - Exonic hg38 UCEC TCGA-AJ-A3BF-01A 7 21 In-Frame Intra-chr q25.3 q25.3 Transcription factor 105270 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRNAD1-CTSS RRNAD1 chr1 156729215 + CTSS chr1 150757980 - Exonic hg38 UCEC TCGA-AJ-A3BF-01A 4 20 In-Frame Intra-chr q23.1 q21.3 Seq+ 105271 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-PIP5KL1 SHANK2 chr11 71092422 - PIP5KL1 chr9 127921604 - Exonic hg38 UCEC TCGA-AJ-A3BF-01A 6 11 CDS-3'UTR Inter-chr q13.4 q34.11 Seq+ 105272 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLS-ANKAR GLS chr2 190931637 + ANKAR chr2 189744742 + Exonic hg38 UCEC TCGA-AJ-A3BF-01A 2 20 Out-of-frame Intra-chr q32.2 Tumor suppressor gene q32.2 Seq+ 105273 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHANK2-ITPK1 SHANK2 chr11 71252425 - ITPK1 chr14 93076619 - Exonic hg38 UCEC TCGA-AJ-A3BF-01A 4 10 5'UTR-5'UTR Inter-chr q13.4 Seq+ 105274 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM184B-DNAH14 TMEM184B chr22 38272884 - DNAH14 chr1 225374688 + Exonic hg38 UCEC TCGA-AJ-A3BF-01A 2 13 5'UTR-CDS Inter-chr q13.1 q42.12 Seq+ 105275 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPCDC-CLK3 PPCDC chr15 75028453 + CLK3 chr15 74627539 + Exonic hg38 UCEC TCGA-AJ-A3BF-01A 1 10 In-Frame Intra-chr q24.2 q24.1 CMGC:CLK 105276 ChimerSeq TCGA FAWG TCGA_RNA-Seq LGR6-NAV1 LGR6 chr1 202235993 + NAV1 chr1 201780421 + Exonic hg38 UCEC TCGA-AJ-A3BF-01A 2 4 In-Frame Intra-chr q32.1 q32.1 Seq+ 105277 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAST2-MMACHC MAST2 chr1 45959477 + MMACHC chr1 45507356 + Exonic hg38 UCEC TCGA-AJ-A3BF-01A 1 4 Out-of-frame Intra-chr p34.1 AGC:MAST p34.1 Seq+ 105278 ChimerSeq TCGA FAWG TCGA_RNA-Seq UHRF1BP1L-PMCH UHRF1BP1L chr12 100142592 - PMCH chr12 102197709 - Exonic hg38 UCEC TCGA-AJ-A3BG-01A 6 37 Out-of-frame Intra-chr q23.1 q23.2 Seq+ 105279 ChimerSeq TCGA FAWG TCGA_RNA-Seq FGF20-RP1 FGF20 chr8 16995655 - RP1 chr8 54738943 + Exonic hg38 UCEC TCGA-AJ-A3BH-01A 3 12 CDS-3'UTR Intra-chr p22 q11.23 Seq+ 105280 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAR3-ABCA4 BCAR3 chr1 93588977 - ABCA4 chr1 94029631 - Exonic hg38 UCEC TCGA-AJ-A3EJ-01A 67 166 In-Frame Intra-chr p22.1 p22.1 Seq+ 105281 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWP2-SNU13 WWP2 chr16 69842120 + SNU13 chr22 41680364 - Exonic hg38 UCEC TCGA-AJ-A3EJ-01A 5 33 Out-of-frame Inter-chr q22.1 q13.2 105282 ChimerSeq TCGA FAWG TCGA_RNA-Seq NGRN-ZNF710 NGRN chr15 90266398 + ZNF710 chr15 90079660 + Exonic hg38 UCEC TCGA-AJ-A3EJ-01A 4 26 Out-of-frame Intra-chr q26.1 q26.1 Transcription factor Seq+ 105283 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK1D-SECTM1 CSNK1D chr17 82273306 - SECTM1 chr17 82323011 - Exonic hg38 UCEC TCGA-AJ-A3EJ-01A 3 11 In-Frame Intra-chr q25.3 q25.3 Seq+ 105284 ChimerSeq TCGA FAWG TCGA_RNA-Seq GSK3B-RASSF2 GSK3B chr3 120093347 - RASSF2 chr20 4801062 - Exonic hg38 UCEC TCGA-AJ-A3EJ-01A 3 9 CDS-5'UTR Inter-chr q13.33 CMGC:GSK Tumor suppressor gene p13 Tumor suppressor gene Seq+ 105285 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSGIN1-PATZ1 OSGIN1 chr16 83953370 + PATZ1 chr22 31327309 - Exonic hg38 UCEC TCGA-AJ-A3EJ-01A 1 10 5'UTR-CDS Inter-chr q23.3 Tumor suppressor gene q12.2 Transcription factor 105286 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRCC-RRNAD1 PRCC chr1 156768239 + RRNAD1 chr1 156731991 + Exonic hg38 UCEC TCGA-AJ-A3EJ-01A 2 4 In-Frame Intra-chr q23.1 q23.1 Seq+ 105287 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSD4-ACTR3 PSD4 chr2 113199226 + ACTR3 chr2 113913172 + Exonic hg38 UCEC TCGA-AJ-A3EJ-01A 1 4 Out-of-frame Intra-chr q14.1 q14.1 105288 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP70-GYG1 CEP70 chr3 138571034 - GYG1 chr3 149024053 + Exonic hg38 UCEC TCGA-AJ-A3EM-01A 86 718 In-Frame Intra-chr q22.3 q24 Seq+ 105289 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM222B-RAB5C FAM222B chr17 28842682 - RAB5C chr17 42130590 - Exonic hg38 UCEC TCGA-AJ-A3EM-01A 47 267 5'UTR-5'UTR Intra-chr q11.2 q21.2 Seq+ 105290 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMBOX1-PNOC HMBOX1 chr8 28890678 + PNOC chr8 28329135 + Exonic hg38 UCEC TCGA-AJ-A3EM-01A 62 145 5'UTR-5'UTR Intra-chr p21.1 Transcription factor p21.1 Seq+ 105291 ChimerSeq TCGA FAWG TCGA_RNA-Seq DEPDC5-BID DEPDC5 chr22 31758633 + BID chr22 17750174 - Exonic hg38 UCEC TCGA-AJ-A3EM-01A 41 166 In-Frame Intra-chr q12.2 q11.21 Seq+ 105292 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP6NL-VPS26A USP6NL chr10 11501101 - VPS26A chr10 69155812 + Exonic hg38 UCEC TCGA-AJ-A3EM-01A 34 111 In-Frame Intra-chr p14 q22.1 Seq+ 105293 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPATA13-HSCB SPATA13 chr13 24160932 + HSCB chr22 28751241 + Exonic hg38 UCEC TCGA-AJ-A3EM-01A 13 71 5'UTR-5'UTR Inter-chr q12.12 q12.1 Seq+ 105294 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACO2-PRR5 ACO2 chr22 41499862 + PRR5 chr22 44702492 + Exonic hg38 UCEC TCGA-AJ-A3EM-01A 15 62 5'UTR-5'UTR Intra-chr q13.2 q13.31 Tumor suppressor gene Seq+ 105295 ChimerSeq TCGA FAWG TCGA_RNA-Seq WAC-ATP5G1P1 WAC chr10 28589851 + ATP5G1P1 chr14 105537158 - Exonic hg38 UCEC TCGA-AJ-A3EM-01A 3 99 Out-of-frame Inter-chr p12.1 Seq+ 105296 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLXNB2-TMPRSS6 PLXNB2 chr22 50307553 - TMPRSS6 chr22 37103418 - Exonic hg38 UCEC TCGA-AJ-A3EM-01A 1 97 5'UTR-5'UTR Intra-chr q13.33 q12.3 Tumor suppressor gene Seq+ 105297 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOB2-ACO2 TOB2 chr22 41446379 - ACO2 chr22 41507791 + Exonic hg38 UCEC TCGA-AJ-A3EM-01A 9 19 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 105298 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASGRP1-CD47 RASGRP1 chr15 38559821 - CD47 chr3 108080344 - Exonic hg38 UCEC TCGA-AJ-A3EM-01A 4 33 In-Frame Inter-chr q14 q13.12 Seq+ 105299 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUCO-DNM3 SUCO chr1 172533497 + DNM3 chr1 171987656 + Exonic hg38 UCEC TCGA-AJ-A3EM-01A 5 7 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 105300 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPP-WWTR1 LPP chr3 188225527 + WWTR1 chr3 149669891 - Exonic hg38 UCEC TCGA-AJ-A3EM-01A 2 18 5'UTR-5'UTR Intra-chr q27.3 Oncogene q25.1 Seq+ 105301 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF26B-UBE2Q1 KIF26B chr1 245419745 + UBE2Q1 chr1 154551819 - Exonic hg38 UCEC TCGA-AJ-A3EM-01A 2 14 3'UTR-CDS Intra-chr q21.3 Seq+ 105302 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP2-TCFL5 SRGAP2 chr1 206206037 + TCFL5 chr20 62854157 - Exonic hg38 UCEC TCGA-AJ-A3EM-01A 1 15 Out-of-frame Inter-chr q32.1 Tumor suppressor gene q13.33 Transcription factor 105303 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITCH-SRSF2 ITCH chr20 34413879 + SRSF2 chr17 76734562 - Exonic hg38 UCEC TCGA-AJ-A3EM-01A 1 7 CDS-3'UTR Inter-chr q11.22 q25.1 Oncogene 105304 ChimerSeq TCGA FAWG TCGA_RNA-Seq GKAP1-ARIH1 GKAP1 chr9 83799185 - ARIH1 chr15 72518067 + Exonic hg38 UCEC TCGA-AJ-A3EM-01A 1 6 In-Frame Inter-chr q21.32 q24.1 Seq+ 105305 ChimerSeq TCGA FAWG TCGA_RNA-Seq THADA-UBR2 THADA chr2 43320446 - UBR2 chr6 42615071 + Exonic hg38 UCEC TCGA-AJ-A3EM-01A 1 5 In-Frame Inter-chr p21 p21.1 Seq+ 105306 ChimerSeq TCGA FAWG TCGA_RNA-Seq RSPRY1-MT4 RSPRY1 chr16 57186451 + MT4 chr16 56565093 + Exonic hg38 UCEC TCGA-AJ-A3I9-01A 181 780 5'UTR-5'UTR Intra-chr q13 q13 Seq+ 105307 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB3-COX4I2 ERBB3 chr12 56080382 + COX4I2 chr20 31643404 + Exonic hg38 UCEC TCGA-AJ-A3I9-01A 38 93 In-Frame Inter-chr q13.2 Oncogene q11.21 Seq+ 105308 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-DPY19L4 PVT1 chr8 127794734 + DPY19L4 chr8 94777666 + Exonic hg38 UCEC TCGA-AJ-A3I9-01A 17 84 5'UTR-CDS Intra-chr q24.21 q22.1 Seq+ 105309 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF1B-SHISA4 KIF1B chr1 10232434 + SHISA4 chr1 201889445 + Exonic hg38 UCEC TCGA-AJ-A3I9-01A 11 55 In-Frame Intra-chr p36.22 Tumor suppressor gene q32.1 Seq+ 105310 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLD3-PPME1 POLD3 chr11 74613010 + PPME1 chr11 74203728 + Exonic hg38 UCEC TCGA-AJ-A3I9-01A 7 47 In-Frame Intra-chr q13.4 q13.4 Seq+ 105311 ChimerSeq TCGA FAWG TCGA_RNA-Seq SGPP2-TEN1 SGPP2 chr2 222424821 + TEN1 chr17 75986187 + Exonic hg38 UCEC TCGA-AJ-A3I9-01A 13 15 5'UTR-5'UTR Inter-chr q36.1 q25.1 Seq+ 105312 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFAF6-MYC NDUFAF6 chr8 94895927 + MYC chr8 127738248 + Exonic hg38 UCEC TCGA-AJ-A3I9-01A 5 34 5'UTR-CDS Intra-chr q22.1 q24.21 Oncogene Transcription factor Seq+ 105313 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHP1-ARHGAP42 CHP1 chr15 41231449 + ARHGAP42 chr11 100959883 + Exonic hg38 UCEC TCGA-AJ-A3I9-01A 2 9 In-Frame Inter-chr q15.1 q22.1 Seq+ 105314 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR47-DECR2 WDR47 chr1 109002224 - DECR2 chr16 411890 + Exonic hg38 UCEC TCGA-AJ-A3I9-01A 2 6 CDS-3'UTR Inter-chr p13.3 Seq+ 105315 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE4B-EIF2S2 UBE4B chr1 10033694 + EIF2S2 chr20 34105545 - Exonic hg38 UCEC TCGA-AJ-A3I9-01A 1 3 In-Frame Inter-chr p36.22 Tumor suppressor gene q11.22 105316 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEAK1-ANGPT1 PEAK1 chr15 77252367 - ANGPT1 chr8 107347097 - Exonic hg38 UCEC TCGA-AJ-A3IA-01A 10 15 5'UTR-5'UTR Inter-chr q24.3 q23.1 Seq+ 105317 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC26A6-CYP2C8 SLC26A6 chr3 48635371 - CYP2C8 chr10 95039038 - Exonic hg38 UCEC TCGA-AJ-A3IA-01A 6 25 Out-of-frame Inter-chr p21.31 q23.33 Seq+ 105318 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRAMP1-VN1R9P CRAMP1 chr16 1614985 + VN1R9P chr22 17022021 - Exonic hg38 UCEC TCGA-AJ-A3IA-01A 7 13 Out-of-frame Inter-chr p13.3 q11.1 105319 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCMT1-SLC22A2 PCMT1 chr6 149773169 + SLC22A2 chr6 160171437 - Exonic hg38 UCEC TCGA-AJ-A3IA-01A 6 12 CDS-3'UTR Intra-chr q25.1 q25.3 Seq+ 105320 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD3-CCDC126 BTBD3 chr20 11890954 + CCDC126 chr7 23642931 + Exonic hg38 UCEC TCGA-AJ-A3IA-01A 4 16 In-Frame Inter-chr p12.2 p15.3 Seq+ 105321 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESR1-PDE7B ESR1 chr6 151808364 + PDE7B chr6 136108731 + Exonic hg38 UCEC TCGA-AJ-A3IA-01A 3 11 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q23.3 Seq+ 105322 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC126-BTBD3 CCDC126 chr7 23611553 + BTBD3 chr20 11918334 + Exonic hg38 UCEC TCGA-AJ-A3IA-01A 3 5 In-Frame Inter-chr p15.3 p12.2 Seq+ 105323 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF3-ENPP3 PHF3 chr6 63646795 + ENPP3 chr6 131637235 + Exonic hg38 UCEC TCGA-AJ-A3IA-01A 2 9 5'UTR-5'UTR Intra-chr q12 q23.2 Seq+ 105324 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM49B-MGAM FAM49B chr8 129903312 - MGAM chr7 142005529 + Exonic hg38 UCEC TCGA-AJ-A3IA-01A 1 12 5'UTR-3'UTR Inter-chr q24.21 Seq+ 105325 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP6-KATNA1 SENP6 chr6 75647801 + KATNA1 chr6 149638560 - Exonic hg38 UCEC TCGA-AJ-A3IA-01A 2 6 CDS-5'UTR Intra-chr q14.1 q25.1 Seq+ 105326 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELOVL2-SMOC2 ELOVL2 chr6 11044228 - SMOC2 chr6 168650681 + Exonic hg38 UCEC TCGA-AJ-A3IA-01A 2 4 Out-of-frame Intra-chr p24.2 q27 Seq+ 105327 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM135A-ADGRG5 FAM135A chr6 70502791 + ADGRG5 chr16 57562056 + Exonic hg38 UCEC TCGA-AJ-A3IA-01A 2 4 5'UTR-5'UTR Inter-chr q13 q21 105328 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD3-FAM221A BTBD3 chr20 11890954 + FAM221A chr7 23689269 + Exonic hg38 UCEC TCGA-AJ-A3IA-01A 2 2 Out-of-frame Inter-chr p12.2 p15.3 Seq+ 105329 ChimerSeq TCGA FAWG TCGA_RNA-Seq SASH1-PLN SASH1 chr6 148343223 + PLN chr6 118558825 + Exonic hg38 UCEC TCGA-AJ-A3IA-01A 1 6 5'UTR-5'UTR Intra-chr q24.3 Tumor suppressor gene q22.31 Seq+ 105330 ChimerSeq TCGA FAWG TCGA_RNA-Seq CENPW-PDE10A CENPW chr6 126346318 + PDE10A chr6 165396459 - Exonic hg38 UCEC TCGA-AJ-A3IA-01A 1 5 In-Frame Intra-chr q22.32 q27 105331 ChimerSeq TCGA FAWG TCGA_RNA-Seq GINM1-SLC35F1 GINM1 chr6 149572603 + SLC35F1 chr6 118235509 + Exonic hg38 UCEC TCGA-AJ-A3IA-01A 1 4 In-Frame Intra-chr q25.1 q22.2 105332 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRR5L-ITPA PRR5L chr11 36403378 + ITPA chr20 3221841 + Exonic hg38 UCEC TCGA-AJ-A3NF-01A 14 70 In-Frame Inter-chr p13 p13 Seq+ 105333 ChimerSeq TCGA FAWG TCGA_RNA-Seq HADH-HPGD HADH chr4 107990064 + HPGD chr4 174508792 - Exonic hg38 UCEC TCGA-AJ-A3NF-01A 9 36 In-Frame Intra-chr q25 q34.1 Tumor suppressor gene Seq+ 105334 ChimerSeq TCGA FAWG TCGA_RNA-Seq TATDN1-CCT2 TATDN1 chr8 124539025 - CCT2 chr12 69586270 + Exonic hg38 UCEC TCGA-AJ-A3NF-01A 6 7 Out-of-frame Inter-chr q24.13 q15 Seq+ 105335 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO5C-HAUS8 MYO5C chr15 52244356 - HAUS8 chr19 17052966 - Exonic hg38 UCEC TCGA-AJ-A3NF-01A 3 15 Out-of-frame Inter-chr q21.2 p13.11 Seq+ 105336 ChimerSeq TCGA FAWG TCGA_RNA-Seq CENPS-PGD CENPS chr1 10440413 + PGD chr1 10413062 + Exonic hg38 UCEC TCGA-AJ-A3NF-01A 4 9 In-Frame Intra-chr p36.22 Tumor suppressor gene Transcription factor p36.22 105337 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIF1-PDE11A RIF1 chr2 151462466 + PDE11A chr2 177728172 - Exonic hg38 UCEC TCGA-AJ-A3NF-01A 3 9 In-Frame Intra-chr q23.3 q31.2 Seq+ 105338 ChimerSeq TCGA FAWG TCGA_RNA-Seq LIMA1-ANO6 LIMA1 chr12 50248633 - ANO6 chr12 45302014 + Exonic hg38 UCEC TCGA-AJ-A3NF-01A 1 4 Out-of-frame Intra-chr q13.12 Tumor suppressor gene q12 Seq+ 105339 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFXANK-SUGP1 RFXANK chr19 19199234 + SUGP1 chr19 19280291 - Exonic hg38 UCEC TCGA-AJ-A3NH-01A 58 268 In-Frame Intra-chr p13.11 p13.11 Seq+ 105340 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNBP4-INSL3 FNBP4 chr11 47731374 - INSL3 chr19 17817059 - Exonic hg38 UCEC TCGA-AJ-A3NH-01A 24 124 5'UTR-CDS Inter-chr p11.2 p13.11 Seq+ 105341 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPNE2-MT1E CPNE2 chr16 57092790 + MT1E chr16 56626466 + Exonic hg38 UCEC TCGA-AJ-A3NH-01A 44 13 5'UTR-CDS Intra-chr q13 q13 Seq+ 105342 ChimerSeq TCGA FAWG TCGA_RNA-Seq GALNT16-RAD51B GALNT16 chr14 69324790 + RAD51B chr14 68682937 + Exonic hg38 UCEC TCGA-AJ-A3NH-01A 19 110 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 105343 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNAI2-SLC39A11 GNAI2 chr3 50256320 + SLC39A11 chr17 72736719 - Exonic hg38 UCEC TCGA-AJ-A3NH-01A 13 39 Out-of-frame Inter-chr p21.31 q25.1 Seq+ 105344 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF646-VSTM1 ZNF646 chr16 31074631 + VSTM1 chr19 54042369 - Exonic hg38 UCEC TCGA-AJ-A3NH-01A 6 30 5'UTR-5'UTR Inter-chr p11.2 Transcription factor Seq+ 105345 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMAN2-RUBCN LMAN2 chr5 177334284 - RUBCN chr3 197684217 - Exonic hg38 UCEC TCGA-AJ-A3NH-01A 7 18 In-Frame Inter-chr q35.3 q29 105346 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEX14-EPHA2 PEX14 chr1 10495321 + EPHA2 chr1 16132439 - Exonic hg38 UCEC TCGA-AJ-A3NH-01A 3 18 Out-of-frame Intra-chr p36.22 p36.13 Tumor suppressor gene Seq+ 105347 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXO17-LGALS7 FBXO17 chr19 38975586 - LGALS7 chr19 38773103 - Exonic hg38 UCEC TCGA-AJ-A3NH-01A 2 16 5'UTR-5'UTR Intra-chr Tumor suppressor gene Seq+ 105348 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAPGEF1-CPNE5 RAPGEF1 chr9 131739770 - CPNE5 chr6 36794649 - Exonic hg38 UCEC TCGA-AJ-A3NH-01A 4 2 Out-of-frame Inter-chr q34.13 p21.2 Seq+ 105349 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPINT2-PPP1R14A SPINT2 chr19 38264998 + PPP1R14A chr19 38252338 - Exonic hg38 UCEC TCGA-AJ-A3NH-01A 2 7 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 Seq+ 105350 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF345-DNAJB1 ZNF345 chr19 36851904 + DNAJB1 chr19 14527810 - Exonic hg38 UCEC TCGA-AJ-A3NH-01A 1 5 5'UTR-5'UTR Intra-chr q13.12 Transcription factor p13.12 Tumor suppressor gene 105351 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOCS5-MSH2 SOCS5 chr2 46699449 + MSH2 chr2 47429742 + Exonic hg38 UCEC TCGA-AJ-A3OJ-01A 3 12 5'UTR-CDS Intra-chr p21 p21 Oncogene Tumor suppressor gene Seq+ 105352 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDHB-CTNNA2 LDHB chr12 21637071 - CTNNA2 chr2 80393211 + Exonic hg38 UCEC TCGA-AJ-A3QS-01A 36 181 In-Frame Inter-chr p12.1 p12 Tumor suppressor gene Seq+ 105353 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKIV2L-HCP5 SKIV2L chr6 31967377 + HCP5 chr6 31477027 + Exonic hg38 UCEC TCGA-AJ-A3QS-01A 21 44 3'UTR-3'UTR Intra-chr p21.33 Seq+ 105354 ChimerSeq TCGA FAWG TCGA_RNA-Seq GABPA-JAM2 GABPA chr21 25741675 + JAM2 chr21 25705979 + Exonic hg38 UCEC TCGA-AJ-A3QS-01A 16 63 Out-of-frame Intra-chr q21.3 Transcription factor q21.3 Seq+ 105355 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBOAT2-IGSF1 MBOAT2 chr2 9003540 - IGSF1 chrX 131289275 - Exonic hg38 UCEC TCGA-AJ-A3QS-01A 5 20 5'UTR-5'UTR Inter-chr p25.1 q26.2 Seq+ 105356 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM60A-PLEKHA5 FAM60A chr12 31326024 - PLEKHA5 chr12 19320562 + Exonic hg38 UCEC TCGA-AJ-A3QS-01A 1 28 Out-of-frame Intra-chr p12.3 Seq+ 105357 ChimerSeq TCGA FAWG TCGA_RNA-Seq STIM1-GPR160 STIM1 chr11 3856409 + GPR160 chr3 170079774 + Exonic hg38 UCEC TCGA-AJ-A3QS-01A 2 15 CDS-5'UTR Inter-chr p15.4 q26.2 Seq+ 105358 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM63B-EFCAB14 TMEM63B chr6 44127866 + EFCAB14 chr1 46691937 - Exonic hg38 UCEC TCGA-AJ-A3QS-01A 3 5 5'UTR-CDS Inter-chr p21.1 p33 Seq+ 105359 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSBP4-SLC5A5 SSBP4 chr19 18433817 + SLC5A5 chr19 17883850 + Exonic hg38 UCEC TCGA-AJ-A3QS-01A 3 4 In-Frame Intra-chr p13.11 p13.11 Seq+ 105360 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCZ1B-NAA11 CCZ1B chr7 6811952 - NAA11 chr4 79226270 - Exonic hg38 UCEC TCGA-AJ-A3QS-01A 2 7 CDS-3'UTR Inter-chr p22.1 q21.21 Seq+ 105361 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFCAB11-TTC7B EFCAB11 chr14 89931541 - TTC7B chr14 90578308 - Exonic hg38 UCEC TCGA-AJ-A3QS-01A 2 4 Out-of-frame Intra-chr q32.11 q32.11 Seq+ 105362 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGB5-SLC12A8 ITGB5 chr3 124886931 - SLC12A8 chr3 125120686 - Exonic hg38 UCEC TCGA-AJ-A3QS-01A 2 3 In-Frame Intra-chr q21.2 q21.2 Seq+ 105363 ChimerSeq TCGA FAWG TCGA_RNA-Seq IPP-SLC22A7 IPP chr1 45700070 - SLC22A7 chr6 43298620 + Exonic hg38 UCEC TCGA-AJ-A3QS-01A 1 6 Out-of-frame Inter-chr p34.1 p21.1 Seq+ 105364 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAM22-RUNDC3B ADAM22 chr7 87978412 + RUNDC3B chr7 87816141 + Exonic hg38 UCEC TCGA-AJ-A3QS-01A 1 4 In-Frame Intra-chr q21.12 q21.12 Seq+ 105365 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYTH3-SPARCL1 CYTH3 chr7 6272474 - SPARCL1 chr4 87499585 - Exonic hg38 UCEC TCGA-AJ-A3QS-01A 1 2 5'UTR-5'UTR Inter-chr p22.1 q22.1 Tumor suppressor gene 105366 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB8A-TINAGL1 ZBTB8A chr1 32553540 + TINAGL1 chr1 31584678 + Exonic hg38 UCEC TCGA-AJ-A3QS-01A 1 2 5'UTR-CDS Intra-chr p35.1 Transcription factor p35.2 105367 ChimerSeq TCGA FAWG TCGA_RNA-Seq STX5-PPP1R14B STX5 chr11 62824217 - PPP1R14B chr11 64244495 - Exonic hg38 UCEC TCGA-AJ-A3TW-01A 28 182 Out-of-frame Intra-chr q12.3 q13.1 Seq+ 105368 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESRRA-ZNF317 ESRRA chr11 64315968 + ZNF317 chr19 9163056 + Exonic hg38 UCEC TCGA-AJ-A3TW-01A 15 148 Out-of-frame Inter-chr q13.1 Transcription factor p13.2 Transcription factor Seq+ 105369 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARD3-IL2RA PARD3 chr10 34516979 - IL2RA chr10 6026025 - Exonic hg38 UCEC TCGA-AJ-A3TW-01A 11 15 In-Frame Intra-chr p11.21 p15.1 Seq+ 105370 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF222-PSG5 ZNF222 chr19 44027490 + PSG5 chr19 43185147 - Exonic hg38 UCEC TCGA-AJ-A3TW-01A 5 39 In-Frame Intra-chr q13.31 Transcription factor q13.31 Seq+ 105371 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF559-FAM129C ZNF559 chr19 9324780 + FAM129C chr19 17527269 + Exonic hg38 UCEC TCGA-AJ-A3TW-01A 7 28 Out-of-frame Intra-chr p13.2 Transcription factor p13.11 Seq+ 105372 ChimerSeq TCGA FAWG TCGA_RNA-Seq ILF2-KCNN3 ILF2 chr1 153669836 - KCNN3 chr1 154737088 - Exonic hg38 UCEC TCGA-AJ-A3TW-01A 2 20 Out-of-frame Intra-chr q21.3 q21.3 105373 ChimerSeq TCGA FAWG TCGA_RNA-Seq FARS2-DTNBP1 FARS2 chr6 5613320 + DTNBP1 chr6 15593081 - Exonic hg38 UCEC TCGA-AJ-A3TW-01A 3 12 In-Frame Intra-chr p25.1 p22.3 Seq+ 105374 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSAP-PCID2 PSAP chr10 71851182 - PCID2 chr13 113200516 - Exonic hg38 UCEC TCGA-AJ-A3TW-01A 3 8 Out-of-frame Inter-chr q22.1 q34 Seq+ 105375 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEMA3B-GNAI2 SEMA3B chr3 50274057 + GNAI2 chr3 50252100 + Exonic hg38 UCEC TCGA-AJ-A3TW-01A 3 8 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Seq+ 105376 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESCO1-SNRPD1 ESCO1 chr18 21600623 - SNRPD1 chr18 21622725 + Exonic hg38 UCEC TCGA-AJ-A3TW-01A 1 1 5'UTR-CDS Intra-chr q11.2 q11.2 105377 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARPC1B-TRRAP ARPC1B chr7 99374781 + TRRAP chr7 98988765 + Exonic hg38 UCEC TCGA-AJ-A6NU-01A 20 31 5'UTR-CDS Intra-chr q22.1 q22.1 Atypical:PIKK Oncogene Seq+ 105378 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-CFTR PVT1 chr8 127794734 + CFTR chr7 117559464 + Exonic hg38 UCEC TCGA-AJ-A6NU-01A 6 74 5'UTR-CDS Inter-chr q24.21 q31.2 Tumor suppressor gene Seq+ 105379 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP34-KDM4B USP34 chr2 61470650 - KDM4B chr19 5119118 + Exonic hg38 UCEC TCGA-AJ-A6NU-01A 12 39 CDS-3'UTR Inter-chr p15 p13.3 Seq+ 105380 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF618-TMEM94 ZNF618 chr9 113876413 + TMEM94 chr17 75471800 + Exonic hg38 UCEC TCGA-AJ-A6NU-01A 3 34 CDS-5'UTR Inter-chr q32 Transcription factor q25.1 105381 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUDC-IGFN1 NUDC chr1 26924166 + IGFN1 chr1 201193247 + Exonic hg38 UCEC TCGA-AJ-A6NU-01A 4 26 CDS-5'UTR Intra-chr p36.11 q32.1 Seq+ 105382 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2L3-LLGL2 UBE2L3 chr22 21567771 + LLGL2 chr17 75543397 + Exonic hg38 UCEC TCGA-AJ-A6NU-01A 10 2 5'UTR-5'UTR Inter-chr q11.21 q25.1 Seq+ 105383 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANXA4-BCAR4 ANXA4 chr2 69742175 + BCAR4 chr16 11820297 - Exonic hg38 UCEC TCGA-AJ-A6NU-01A 5 17 5'UTR-3'UTR Inter-chr p13.3 p13.13 Seq+ 105384 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRAP-CFAP65 BRAP chr12 111679151 - CFAP65 chr2 219019719 - Exonic hg38 UCEC TCGA-AJ-A6NU-01A 1 12 Out-of-frame Inter-chr q24.12 q35 105385 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM160B1-SHROOM3 FAM160B1 chr10 114836246 + SHROOM3 chr4 76555609 + Exonic hg38 UCEC TCGA-AP-A3K1-01A 5 18 In-Frame Inter-chr q25.3 q21.1 Seq+ 105386 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRCAP-GNB1L SRCAP chr16 30740707 + GNB1L chr22 19812447 - Exonic hg38 UCEC TCGA-AP-A3K1-01A 4 9 3'UTR-CDS Inter-chr p11.2 Transcription factor q11.21 Seq+ 105387 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM265-GNB1L TMEM265 chr16 30740707 + GNB1L chr22 19812447 - Exonic hg38 UCEC TCGA-AP-A3K1-01A 4 9 5'UTR-CDS Inter-chr p11.2 q11.21 105388 ChimerSeq TCGA FAWG TCGA_RNA-Seq VPS29-TMEM91 VPS29 chr12 110502049 - TMEM91 chr19 41378281 + Exonic hg38 UCEC TCGA-AP-A3K1-01A 1 1 5'UTR-5'UTR Inter-chr q24.11 q13.2 105389 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH2-SEC22B NOTCH2 chr1 119986960 - SEC22B chr1 120160530 - Exonic hg38 UCEC TCGA-AP-A5FX-01A 10 63 In-Frame Intra-chr p12 Oncogene Tumor suppressor gene p12 Seq+ 105390 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF564-CACNA1A ZNF564 chr19 12551330 - CACNA1A chr19 13519503 - Exonic hg38 UCEC TCGA-AP-A5FX-01A 10 35 CDS-5'UTR Intra-chr p13.2 Transcription factor p13.13 Seq+ 105391 ChimerSeq TCGA FAWG TCGA_RNA-Seq EDEM1-ITPR1 EDEM1 chr3 5195281 + ITPR1 chr3 4846139 + Exonic hg38 UCEC TCGA-AP-A5FX-01A 9 12 In-Frame Intra-chr p26.1 p26.1 Seq+ 105392 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACP2-MRPL48 ACP2 chr11 47245305 - MRPL48 chr11 73844807 + Exonic hg38 UCEC TCGA-AP-A5FX-01A 3 30 In-Frame Intra-chr p11.2 q13.4 Seq+ 105393 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO6-DEPTOR MYO6 chr6 75817664 + DEPTOR chr8 119965232 + Exonic hg38 UCEC TCGA-AP-A5FX-01A 2 17 Out-of-frame Inter-chr q14.1 q24.12 Seq+ 105394 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARVELD2-PIK3R1 MARVELD2 chr5 69424636 + PIK3R1 chr5 68293709 + Exonic hg38 UCEC TCGA-AP-A5FX-01A 1 13 3'UTR-CDS Intra-chr q13.2 q13.1 Oncogene Seq+ 105395 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTGR1-PTBP3 PTGR1 chr9 111597317 - PTBP3 chr9 112297916 - Exonic hg38 UCEC TCGA-AP-A5FX-01A 3 3 Out-of-frame Intra-chr q31.3 q32 Seq+ 105396 ChimerSeq TCGA FAWG TCGA_RNA-Seq CPAMD8-LILRB3 CPAMD8 chr19 16896176 - LILRB3 chr19 54218413 - Exonic hg38 UCEC TCGA-AP-A5FX-01A 2 4 CDS-5'UTR Intra-chr p13.11 Seq+ 105397 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCC1-SYCP2L SMARCC1 chr3 47772817 - SYCP2L chr6 10942677 + Exonic hg38 UCEC TCGA-AP-A5FX-01A 2 4 In-Frame Inter-chr p21.31 Tumor suppressor gene p24.2 Seq+ 105398 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARAP3-CTBP2 ARAP3 chr5 141666424 - CTBP2 chr10 124989698 - Exonic hg38 UCEC TCGA-AP-A5FX-01A 2 1 Out-of-frame Inter-chr q31.3 q26.13 Seq+ 105399 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPS29-RPL36AL RPS29 chr14 49585950 - RPL36AL chr14 49619140 - Exonic hg38 UCEC TCGA-AP-A5FX-01A 1 2 5'UTR-5'UTR Intra-chr q21.3 q21.3 105400 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPM3-C1orf189 TPM3 chr1 154182988 - C1orf189 chr1 154200588 - Exonic hg38 UCEC TCGA-AP-A5FX-01A 1 1 In-Frame Intra-chr q21.3 q21.3 105401 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAPOLA-GSKIP PAPOLA chr14 96502600 + GSKIP chr14 96379688 + Exonic hg38 UCEC TCGA-AX-A2H4-01A 19 28 5'UTR-5'UTR Intra-chr q32.2 q32.2 Seq+ 105402 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOXB-MAPT HOXB chr17 48590589 + MAPT chr17 46010310 + Exonic hg38 UCEC TCGA-AX-A2H4-01A 3 50 Out-of-frame Intra-chr 105403 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK1E-DMC1 CSNK1E chr22 38298786 - DMC1 chr22 38562369 - Exonic hg38 UCEC TCGA-AX-A2H4-01A 4 40 In-Frame Intra-chr q13.1 q13.1 Seq+ 105404 ChimerSeq TCGA FAWG TCGA_RNA-Seq APOPT1-MARK3 APOPT1 chr14 103563124 + MARK3 chr14 103491777 + Exonic hg38 UCEC TCGA-AX-A2H4-01A 7 19 Out-of-frame Intra-chr q32.33 q32.32 CAMK:CAMKL Seq+ 105405 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRPK2-KIF12 SRPK2 chr7 105388648 - KIF12 chr9 114099169 - Exonic hg38 UCEC TCGA-AX-A2H4-01A 3 11 5'UTR-5'UTR Inter-chr q22.3 CMGC:SRPK q32 Seq+ 105406 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBNO2-CACNA2D2 SBNO2 chr19 1132090 - CACNA2D2 chr3 50434429 - Exonic hg38 UCEC TCGA-AX-A2H4-01A 1 16 5'UTR-CDS Inter-chr p13.3 p21.31 Seq+ 105407 ChimerSeq TCGA FAWG TCGA_RNA-Seq STX8-YWHAEP7 STX8 chr17 9378552 - YWHAEP7 chr17 37828964 - Exonic hg38 UCEC TCGA-AX-A2H4-01A 3 6 CDS-5'UTR Intra-chr p13.1 q12 105408 ChimerSeq TCGA FAWG TCGA_RNA-Seq PABPC1L-PKIG PABPC1L chr20 44933185 + PKIG chr20 44598616 + Exonic hg38 UCEC TCGA-AX-A2H4-01A 2 8 5'UTR-5'UTR Intra-chr q13.12 q13.12 Seq+ 105409 ChimerSeq TCGA FAWG TCGA_RNA-Seq NACC2-LHX3 NACC2 chr9 136049636 - LHX3 chr9 136200753 - Exonic hg38 UCEC TCGA-AX-A2H4-01A 3 3 In-Frame Intra-chr q34.3 Transcription factor q34.3 Transcription factor 105410 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMB5-HOMEZ PSMB5 chr14 23033368 - HOMEZ chr14 23277187 - Exonic hg38 UCEC TCGA-AX-A2H4-01A 1 11 In-Frame Intra-chr q11.2 q11.2 Transcription factor 105411 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM168A-C2CD3 FAM168A chr11 73597923 - C2CD3 chr11 74013525 - Exonic hg38 UCEC TCGA-AX-A2H4-01A 2 5 5'UTR-CDS Intra-chr q13.4 q13.4 Seq+ 105412 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTK2-MKLN1 PTK2 chr8 140735251 - MKLN1 chr7 131463217 + Exonic hg38 UCEC TCGA-AX-A2H4-01A 2 5 Out-of-frame Inter-chr q24.3 q32.3 Seq+ 105413 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRPK2-EFCAB10 SRPK2 chr7 105388648 - EFCAB10 chr7 105569571 - Exonic hg38 UCEC TCGA-AX-A2H4-01A 2 5 In-Frame Intra-chr q22.3 CMGC:SRPK q22.3 Seq+ 105414 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGCR8-CCL4L2 DGCR8 chr22 20080383 + CCL4L2 chr17 36211776 + Exonic hg38 UCEC TCGA-AX-A2H4-01A 1 8 5'UTR-3'UTR Inter-chr q11.21 q12 105415 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRPV3-UBE2G1 TRPV3 chr17 3542522 - UBE2G1 chr17 4289408 - Exonic hg38 UCEC TCGA-AX-A2H4-01A 1 8 In-Frame Intra-chr p13.2 p13.2 Seq+ 105416 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPND-CCDC94 MPND chr19 4358172 + CCDC94 chr19 4251027 + Exonic hg38 UCEC TCGA-AX-A2H4-01A 2 3 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 105417 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF115-LIX1L RNF115 chr1 145784539 - LIX1L chr1 145947782 - Exonic hg38 UCEC TCGA-AX-A2H4-01A 1 3 Out-of-frame Intra-chr q21.1 q21.1 105418 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPON1-CD47 SPON1 chr11 14041654 + CD47 chr3 108080344 - Exonic hg38 UCEC TCGA-AX-A2H4-01A 1 3 Out-of-frame Inter-chr p15.2 q13.12 Seq+ 105419 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRKRIP1-SH2B2 PRKRIP1 chr7 102397698 + SH2B2 chr7 102320331 + Exonic hg38 UCEC TCGA-AX-A2H4-01A 1 1 Out-of-frame Intra-chr q22.1 q22.1 105420 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBM28-KMT2C RBM28 chr7 128330819 - KMT2C chr7 152185631 - Exonic hg38 UCEC TCGA-AX-A3FV-01A 7 90 In-Frame Intra-chr q32.1 q36.1 Oncogene Tumor suppressor gene Seq+ 105421 ChimerSeq TCGA FAWG TCGA_RNA-Seq ETFRF1-LRMP ETFRF1 chr12 25204007 + LRMP chr12 25096910 + Exonic hg38 UCEC TCGA-AX-A3FV-01A 7 19 In-Frame Intra-chr p12.1 p12.1 Tumor suppressor gene 105422 ChimerSeq TCGA FAWG TCGA_RNA-Seq PABPC1-ZFPM2 PABPC1 chr8 100721391 - ZFPM2 chr8 105419144 + Exonic hg38 UCEC TCGA-AX-A3FV-01A 7 16 In-Frame Intra-chr q22.3 q22.3 Transcription factor Seq+ 105423 ChimerSeq TCGA FAWG TCGA_RNA-Seq WWP2-TANGO6 WWP2 chr16 69842120 + TANGO6 chr16 69022828 + Exonic hg38 UCEC TCGA-AX-A3FV-01A 4 10 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 105424 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAHCC1-CCDC137 BAHCC1 chr17 81426979 + CCDC137 chr17 81667729 + Exonic hg38 UCEC TCGA-AX-A3FV-01A 2 11 Out-of-frame Intra-chr q25.3 q25.3 105425 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAML3-GTSF1 MAML3 chr4 140152860 - GTSF1 chr12 54463297 - Exonic hg38 UCEC TCGA-AX-A3FW-01A 11 39 In-Frame Inter-chr q31.1 q13.13 Seq+ 105426 ChimerSeq TCGA FAWG TCGA_RNA-Seq GIGYF2-SP2 GIGYF2 chr2 232806657 + SP2 chr17 47915312 + Exonic hg38 UCEC TCGA-AX-A3FW-01A 5 8 Out-of-frame Inter-chr q37.1 q21.32 Transcription factor Seq+ 105427 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF21B-WNT7B PHF21B chr22 45008545 - WNT7B chr22 45931369 - Exonic hg38 UCEC TCGA-AX-A3FW-01A 5 5 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 105428 ChimerSeq TCGA FAWG TCGA_RNA-Seq DRAIC-AAAS DRAIC chr15 69468393 + AAAS chr12 53309721 - Exonic hg38 UCEC TCGA-AX-A3FW-01A 2 13 5'UTR-CDS Inter-chr q23 q13.13 105429 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOS1-DTL SOS1 chr2 39022570 - DTL chr1 212078173 + Exonic hg38 UCEC TCGA-AX-A3FW-01A 2 8 Out-of-frame Inter-chr p22.1 q32.3 Seq+ 105430 ChimerSeq TCGA FAWG TCGA_RNA-Seq CWH43-OCIAD1 CWH43 chr4 49050849 + OCIAD1 chr4 48860725 + Exonic hg38 UCEC TCGA-AX-A3FW-01A 1 10 Out-of-frame Intra-chr p11 p11 105431 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM208A-TADA3 FAM208A chr3 56660731 - TADA3 chr3 9791493 - Exonic hg38 UCEC TCGA-AX-A3FW-01A 2 3 Out-of-frame Intra-chr p14.3 p25.3 Seq+ 105432 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASXL2-HADHA ASXL2 chr2 25799385 - HADHA chr2 26209889 - Exonic hg38 UCEC TCGA-AX-A3FW-01A 1 1 Out-of-frame Intra-chr p23.3 p23.3 Seq+ 105433 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5407150 - RNF216 chr7 5641376 - Exonic hg38 UCEC TCGA-AX-A3FX-01A 12 65 Out-of-frame Intra-chr p22.1 p22.1 Seq+ 105434 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF516-MBP ZNF516 chr18 76490681 - MBP chr18 76990060 - Exonic hg38 UCEC TCGA-AX-A3FX-01A 8 50 5'UTR-CDS Intra-chr q23 Transcription factor q23 Seq+ 105435 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUGP1-MEX3D SUGP1 chr19 19296989 - MEX3D chr19 1556923 - Exonic hg38 UCEC TCGA-AX-A3FX-01A 2 7 In-Frame Intra-chr p13.11 p13.3 Seq+ 105436 ChimerSeq TCGA FAWG TCGA_RNA-Seq MBTPS1-CDH5 MBTPS1 chr16 84063305 - CDH5 chr16 66388324 + Exonic hg38 UCEC TCGA-AX-A3FX-01A 2 6 In-Frame Intra-chr q24.1 q21 Oncogene Tumor suppressor gene Seq+ 105437 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCNYL1-FRMD4B CCNYL1 chr2 207742342 + FRMD4B chr3 69377119 - Exonic hg38 UCEC TCGA-AX-A3FX-01A 1 9 Out-of-frame Inter-chr q33.3 p14.1 105438 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD2-KIF9 SETD2 chr3 47163854 - KIF9 chr3 47275490 - Exonic hg38 UCEC TCGA-AX-A3FX-01A 1 6 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Seq+ 105439 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXK2-HEXDC FOXK2 chr17 82563548 + HEXDC chr17 82424394 + Exonic hg38 UCEC TCGA-AX-A3FX-01A 1 4 Out-of-frame Intra-chr q25.3 Transcription factor q25.3 Seq+ 105440 ChimerSeq TCGA FAWG TCGA_RNA-Seq NKD2-ICE1 NKD2 chr5 1009560 + ICE1 chr5 5454552 + Exonic hg38 UCEC TCGA-AX-A3FZ-01A 2 7 3'UTR-CDS Intra-chr p15.32 105441 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMC5-C16orf62 TMC5 chr16 19430640 + C16orf62 chr16 19682225 + Exonic hg38 UCEC TCGA-AX-A3G1-01A 1 14 Out-of-frame Intra-chr p12.3 p12.3 105442 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDE12-KCNJ4 PDE12 chr3 57559388 + KCNJ4 chr22 38428171 - Exonic hg38 UCEC TCGA-AX-A3G1-01A 2 6 CDS-5'UTR Inter-chr p14.3 q13.1 Seq+ 105443 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESCO1-ABHD3 ESCO1 chr18 21573314 - ABHD3 chr18 21659343 - Exonic hg38 UCEC TCGA-AX-A3G1-01A 1 9 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 105444 ChimerSeq TCGA FAWG TCGA_RNA-Seq INVS-RPA3 INVS chr9 100126549 + RPA3 chr7 7641175 - Exonic hg38 UCEC TCGA-AX-A3G1-01A 1 4 5'UTR-5'UTR Inter-chr q31.1 p21.3 Seq+ 105445 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC38A1-GTSE1 SLC38A1 chr12 46268865 - GTSE1 chr22 46323190 + Exonic hg38 UCEC TCGA-AX-A3G3-01A 6 56 5'UTR-CDS Inter-chr q13.11 q13.31 Seq+ 105446 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1CB-PI4KB PPP1CB chr2 28752176 + PI4KB chr1 151307801 - Exonic hg38 UCEC TCGA-AX-A3G3-01A 4 18 Out-of-frame Inter-chr p23.2 q21.3 Seq+ 105447 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRUNE1-PI4KB PRUNE1 chr1 151025673 + PI4KB chr1 151307801 - Exonic hg38 UCEC TCGA-AX-A3G3-01A 2 22 Out-of-frame Intra-chr q21.3 q21.3 105448 ChimerSeq TCGA FAWG TCGA_RNA-Seq THSD4-PTPA THSD4 chr15 71256715 + PTPA chr9 129147387 + Exonic hg38 UCEC TCGA-AX-A3G3-01A 1 13 Out-of-frame Inter-chr q23 q34.11 Tumor suppressor gene 105449 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEPT1-MOV10 CEPT1 chr1 111161296 + MOV10 chr1 112688935 + Exonic hg38 UCEC TCGA-AX-A3G3-01A 2 8 In-Frame Intra-chr p13.3 p13.2 Seq+ 105450 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDAH-MBOAT2 LDAH chr2 20790255 - MBOAT2 chr2 8882565 - Exonic hg38 UCEC TCGA-AX-A3G3-01A 1 11 In-Frame Intra-chr p24.1 p25.1 105451 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYH10-CCDC42 MYH10 chr17 8500826 - CCDC42 chr17 8735254 - Exonic hg38 UCEC TCGA-AX-A3G3-01A 1 4 In-Frame Intra-chr p13.1 p13.1 Seq+ 105452 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED25-TBC1D17 MED25 chr19 49836406 + TBC1D17 chr19 49887718 + Exonic hg38 UCEC TCGA-AX-A3G3-01A 1000 1000 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 105453 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO9A-PARP6 MYO9A chr15 72117680 - PARP6 chr15 72242699 - Exonic hg38 UCEC TCGA-AX-A3G4-01A 29 156 5'UTR-CDS Intra-chr q23 q23 Seq+ 105454 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAX1BP1-GPX4 TAX1BP1 chr7 27740269 + GPX4 chr19 1105186 + Exonic hg38 UCEC TCGA-AX-A3G4-01A 7 52 5'UTR-CDS Inter-chr p15.2 p13.3 Seq+ 105455 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOCAD-CD2 FOCAD chr9 20823115 + CD2 chr1 116760402 + Exonic hg38 UCEC TCGA-AX-A3G4-01A 10 39 Out-of-frame Inter-chr p21.3 p13.1 Seq+ 105456 ChimerSeq TCGA FAWG TCGA_RNA-Seq EP300-PAICS EP300 chr22 41117821 + PAICS chr4 56459372 + Exonic hg38 UCEC TCGA-AX-A3G4-01A 10 35 Out-of-frame Inter-chr q13.2 Oncogene q12 Seq+ 105457 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTDSPL2-FBXO42 CTDSPL2 chr15 44427772 + FBXO42 chr1 16294917 - Exonic hg38 UCEC TCGA-AX-A3G4-01A 3 13 5'UTR-CDS Inter-chr q15.3 p36.13 Seq+ 105458 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPBL-SPEF2 NIPBL chr5 36877178 + SPEF2 chr5 35753624 + Exonic hg38 UCEC TCGA-AX-A3G4-01A 2 8 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 105459 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPTOR-FAHD2B RPTOR chr17 80625793 + FAHD2B chr2 97091712 - Exonic hg38 UCEC TCGA-AX-A3G4-01A 2 4 CDS-5'UTR Inter-chr q25.3 q11.2 Seq+ 105460 ChimerSeq TCGA FAWG TCGA_RNA-Seq C20orf196-ORAOV1 C20orf196 chr20 5773043 + ORAOV1 chr11 69671819 - Exonic hg38 UCEC TCGA-AX-A3G4-01A 2 1 Out-of-frame Inter-chr p12.3 q13.3 Seq+ 105461 ChimerSeq TCGA FAWG TCGA_RNA-Seq CFAP36-ACYP2 CFAP36 chr2 55533960 + ACYP2 chr2 54304688 + Exonic hg38 UCEC TCGA-AX-A3G6-01A 20 79 In-Frame Intra-chr p16.1 p16.2 105462 ChimerSeq TCGA FAWG TCGA_RNA-Seq AGPAT3-PDE9A AGPAT3 chr21 43904019 + PDE9A chr21 42686192 + Exonic hg38 UCEC TCGA-AX-A3G6-01A 5 25 5'UTR-5'UTR Intra-chr q22.3 q22.3 Seq+ 105463 ChimerSeq TCGA FAWG TCGA_RNA-Seq MECOM-C5orf67 MECOM chr3 169663336 - C5orf67 chr5 56535228 - Exonic hg38 UCEC TCGA-AX-A3G6-01A 2 6 CDS-3'UTR Inter-chr q26.2 Transcription factor q11.2 105464 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCMT1-HSP90B1 PCMT1 chr6 149793669 + HSP90B1 chr12 103946856 + Exonic hg38 UCEC TCGA-AX-A3G7-01A 6 1 Out-of-frame Inter-chr q25.1 q23.3 Tumor suppressor gene Seq+ 105465 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2B4-TFEB ATP2B4 chr1 203727571 + TFEB chr6 41691235 - Exonic hg38 UCEC TCGA-AX-A3G7-01A 3 4 Out-of-frame Inter-chr q32.1 p21.1 Transcription factor Seq+ 105466 ChimerSeq TCGA FAWG TCGA_RNA-Seq G3BP1-LMNB1 G3BP1 chr5 151772036 + LMNB1 chr5 126804776 + Exonic hg38 UCEC TCGA-AX-A3GI-01A 35 104 5'UTR-5'UTR Intra-chr q33.1 q23.2 Seq+ 105467 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMIP-SUGP2 CMIP chr16 81445541 + SUGP2 chr19 19010342 - Exonic hg38 UCEC TCGA-AX-A3GI-01A 9 29 Out-of-frame Inter-chr q23.2 p13.11 Seq+ 105468 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM168A-PARVA FAM168A chr11 73597923 - PARVA chr11 12473745 + Exonic hg38 UCEC TCGA-AX-A3GI-01A 7 29 5'UTR-CDS Intra-chr q13.4 p15.3 Seq+ 105469 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATXN10-PGR ATXN10 chr22 45740538 + PGR chr11 101091876 - Exonic hg38 UCEC TCGA-AX-A3GI-01A 4 16 Out-of-frame Inter-chr q13.31 q22.1 Tumor suppressor gene Transcription factor Seq+ 105470 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRPF39-FANCM PRPF39 chr14 45084249 + FANCM chr14 45196172 + Exonic hg38 UCEC TCGA-AX-A3GI-01A 2 24 5'UTR-CDS Intra-chr q21.2 q21.2 Seq+ 105471 ChimerSeq TCGA FAWG TCGA_RNA-Seq RMDN3-SMIM14 RMDN3 chr15 40751426 - SMIM14 chr4 39572463 - Exonic hg38 UCEC TCGA-AX-A3GI-01A 2 19 Out-of-frame Inter-chr q15.1 p14 Seq+ 105472 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAD2-WDYHV1 ATAD2 chr8 123396187 - WDYHV1 chr8 123427924 + Exonic hg38 UCEC TCGA-AX-A3GI-01A 3 11 Out-of-frame Intra-chr q24.13 q24.13 Seq+ 105473 ChimerSeq TCGA FAWG TCGA_RNA-Seq BIRC6-SLC30A6 BIRC6 chr2 32357486 + SLC30A6 chr2 32171287 + Exonic hg38 UCEC TCGA-AX-A3GI-01A 2 15 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 105474 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC31A-EIF4G3 SEC31A chr4 82842140 - EIF4G3 chr1 21050994 - Exonic hg38 UCEC TCGA-AX-A3GI-01A 1 6 CDS-5'UTR Inter-chr q21.22 p36.12 Seq+ 105475 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLC1-MARK3 KLC1 chr14 103629494 + MARK3 chr14 103502882 + Exonic hg38 UCEC TCGA-B5-A0JN-01A 18 22 5'UTR-CDS Intra-chr q32.33 q32.32 CAMK:CAMKL Seq+ 105476 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP2A2-VPS26A AP2A2 chr11 959505 + VPS26A chr10 69155812 + Exonic hg38 UCEC TCGA-B5-A0JN-01A 11 38 3'UTR-CDS Inter-chr p15.5 q22.1 Seq+ 105477 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASRGL1-CPSF7 ASRGL1 chr11 62357144 + CPSF7 chr11 61421608 - Exonic hg38 UCEC TCGA-B5-A0JN-01A 9 34 Out-of-frame Intra-chr q12.3 q12.2 Seq+ 105478 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPZB-CENPS CAPZB chr1 19485436 - CENPS chr1 10440347 + Exonic hg38 UCEC TCGA-B5-A0JN-01A 3 21 Out-of-frame Intra-chr p36.13 p36.22 Tumor suppressor gene Transcription factor 105479 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEX14-KIF1B PEX14 chr1 10475002 + KIF1B chr1 10374316 + Exonic hg38 UCEC TCGA-B5-A0JN-01A 6 5 Out-of-frame Intra-chr p36.22 p36.22 Tumor suppressor gene Seq+ 105480 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJA3-ZDHHC16 DNAJA3 chr16 4448848 + ZDHHC16 chr10 97451671 + Exonic hg38 UCEC TCGA-B5-A0JN-01A 3 7 3'UTR-5'UTR Inter-chr Tumor suppressor gene q24.1 Seq+ 105481 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOOK1-FGGY HOOK1 chr1 59828852 + FGGY chr1 59757931 + Exonic hg38 UCEC TCGA-B5-A0JN-01A 4 3 In-Frame Intra-chr p32.1 p32.1 Seq+ 105482 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM184B-SUN2 TMEM184B chr22 38272884 - SUN2 chr22 38745811 - Exonic hg38 UCEC TCGA-B5-A0JN-01A 2 7 5'UTR-CDS Intra-chr q13.1 q13.1 Seq+ 105483 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF8-FAM120C PHF8 chrX 54042631 - FAM120C chrX 54073287 - Exonic hg38 UCEC TCGA-B5-A0JN-01A 1 5 In-Frame Intra-chr p11.22 p11.22 Seq+ 105484 ChimerSeq TCGA FAWG TCGA_RNA-Seq EXOC2-RNF144B EXOC2 chr6 532469 - RNF144B chr6 18439684 + Exonic hg38 UCEC TCGA-B5-A0JN-01A 1 4 Out-of-frame Intra-chr p25.3 p22.3 Seq+ 105485 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLN2-RPS27L TLN2 chr15 62390685 + RPS27L chr15 63156521 - Exonic hg38 UCEC TCGA-B5-A0JN-01A 1 1 5'UTR-CDS Intra-chr q22.2 q22.2 105486 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHG5-DNAJC11 PLEKHG5 chr1 6496493 - DNAJC11 chr1 6654287 - Exonic hg38 UCEC TCGA-B5-A0K9-01A 1 10 Out-of-frame Intra-chr p36.31 Oncogene p36.31 Tumor suppressor gene 105487 ChimerSeq TCGA FAWG TCGA_RNA-Seq CC2D1A-RLN3 CC2D1A chr19 13913638 + RLN3 chr19 14030710 + Exonic hg38 UCEC TCGA-B5-A1MS-01B 17 60 In-Frame Intra-chr p13.12 Transcription factor p13.12 Seq+ 105488 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATAD2B-LAMC3 GATAD2B chr1 153922733 - LAMC3 chr9 131061035 + Exonic hg38 UCEC TCGA-B5-A1MS-01B 9 21 5'UTR-CDS Inter-chr Transcription factor q34.12 Seq+ 105489 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRBA-DLG2 LRBA chr4 150349992 - DLG2 chr11 84059484 - Exonic hg38 UCEC TCGA-B5-A1MS-01B 5 20 Out-of-frame Inter-chr q31.3 q14.1 Seq+ 105490 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCY9-FAM65C ADCY9 chr16 4113750 - FAM65C chr20 50630856 - Exonic hg38 UCEC TCGA-B5-A1MS-01B 1 12 Out-of-frame Inter-chr p13.3 Seq+ 105491 ChimerSeq TCGA FAWG TCGA_RNA-Seq LARS2-SACM1L LARS2 chr3 45458886 + SACM1L chr3 45713137 + Exonic hg38 UCEC TCGA-B5-A1MS-01B 2 4 In-Frame Intra-chr p21.31 p21.31 Seq+ 105492 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D22A-GTSE1 TBC1D22A chr22 47037198 + GTSE1 chr22 46308150 + Exonic hg38 UCEC TCGA-B5-A1MS-01B 2 4 Out-of-frame Intra-chr q13.31 q13.31 Seq+ 105493 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESCO1-ABHD3 ESCO1 chr18 21560859 - ABHD3 chr18 21664230 - Exonic hg38 UCEC TCGA-B5-A1MS-01B 1 5 In-Frame Intra-chr q11.2 q11.2 Seq+ 105494 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANSL3-SHE KANSL3 chr2 96601643 - SHE chr1 154499238 - Exonic hg38 UCEC TCGA-B5-A1MS-01B 1 5 In-Frame Inter-chr q11.2 q21.3 105495 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACROD2-DGAT2 MACROD2 chr20 15230061 + DGAT2 chr11 75784618 + Exonic hg38 UCEC TCGA-B5-A1MS-01B 1 4 Out-of-frame Inter-chr p12.1 q13.5 Seq+ 105496 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLRG1-SRGAP2B PLRG1 chr4 154550300 - SRGAP2B chr1 144995200 - Exonic hg38 UCEC TCGA-B5-A1MS-01B 1 2 Out-of-frame Inter-chr q31.3 q21.1 Seq+ 105497 ChimerSeq TCGA FAWG TCGA_RNA-Seq EED-HIKESHI EED chr11 86277991 + HIKESHI chr11 86337379 + Exonic hg38 UCEC TCGA-B5-A1MS-01B 1000 1000 Out-of-frame Intra-chr q14.2 Tumor suppressor gene q14.2 105498 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCALD-RRM2B NCALD chr8 101915809 - RRM2B chr8 102232304 - Exonic hg38 UCEC TCGA-B5-A1MW-01A 4 9 5'UTR-CDS Intra-chr q22.3 q22.3 Seq+ 105499 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUSD6-PLEKHD1 SUSD6 chr14 69611828 + PLEKHD1 chr14 69500115 + Exonic hg38 UCEC TCGA-B5-A1MW-01A 2 17 5'UTR-CDS Intra-chr q24.1 q24.1 105500 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKN1A-ERAS CDKN1A chr6 36678798 + ERAS chrX 48829081 + Exonic hg38 UCEC TCGA-B5-A3FB-01A 592 2028 5'UTR-5'UTR Inter-chr p21.2 Tumor suppressor gene p11.23 Seq+ 105501 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABCG1-BACE2 ABCG1 chr21 42288312 + BACE2 chr21 41226266 + Exonic hg38 UCEC TCGA-B5-A3FB-01A 3 32 In-Frame Intra-chr q22.3 q22.2 Seq+ 105502 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMYND8-TFE3 ZMYND8 chr20 47221314 - TFE3 chrX 49039410 - Exonic hg38 UCEC TCGA-B5-A3FB-01A 1 26 Out-of-frame Inter-chr q13.12 p11.23 Oncogene Transcription factor Seq+ 105503 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC37A4-HYOU1 SLC37A4 chr11 119030186 - HYOU1 chr11 119048315 - Exonic hg38 UCEC TCGA-B5-A3FB-01A 3 15 Out-of-frame Intra-chr Seq+ 105504 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACOX1-SRP68 ACOX1 chr17 75955566 - SRP68 chr17 76064171 - Exonic hg38 UCEC TCGA-B5-A3FB-01A 3 8 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 105505 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK2-C11orf84 MARK2 chr11 63839560 + C11orf84 chr11 63817805 + Exonic hg38 UCEC TCGA-B5-A3FB-01A 1 9 Out-of-frame Intra-chr q13.1 CAMK:CAMKL q13.1 Seq+ 105506 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFAT5-PITPNM2 NFAT5 chr16 69566374 + PITPNM2 chr12 123034685 - Exonic hg38 UCEC TCGA-B5-A3FB-01A 1 5 5'UTR-5'UTR Inter-chr q22.1 Transcription factor q24.31 Seq+ 105507 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA3-KCTD20 NCOA3 chr20 47502019 + KCTD20 chr6 36470052 + Exonic hg38 UCEC TCGA-B5-A3FB-01A 1000 1000 5'UTR-5'UTR Inter-chr q13.12 Transcription factor p21.31 Seq+ 105508 ChimerSeq TCGA FAWG TCGA_RNA-Seq PFKFB4-UQCRC1 PFKFB4 chr3 48539697 - UQCRC1 chr3 48601467 - Exonic hg38 UCEC TCGA-B5-A3FD-01A 2 19 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 105509 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHIC1-CDX4 CHIC1 chrX 73584572 + CDX4 chrX 73453517 + Exonic hg38 UCEC TCGA-B5-A3FH-01A 7 72 Out-of-frame Intra-chr q13.2 q13.2 Transcription factor Seq+ 105510 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPCPD1-CASC20 GPCPD1 chr20 5575413 - CASC20 chr20 6446723 + Exonic hg38 UCEC TCGA-B5-A3FH-01A 2 19 CDS-5'UTR Intra-chr p12.3 p12.3 105511 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGU-C20orf85 PIGU chr20 34657180 - C20orf85 chr20 58153544 + Exonic hg38 UCEC TCGA-B5-A3FH-01A 3 8 Out-of-frame Intra-chr q11.22 q13.32 Seq+ 105512 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF9-GYG1 KIF9 chr3 47282495 - GYG1 chr3 149024053 + Exonic hg38 UCEC TCGA-B5-A3S1-01A 17 38 5'UTR-CDS Intra-chr p21.31 q24 Seq+ 105513 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBR2-KANK2 UBR2 chr6 42564397 + KANK2 chr19 11176817 - Exonic hg38 UCEC TCGA-B5-A3S1-01A 6 45 Out-of-frame Inter-chr p21.1 p13.2 Seq+ 105514 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFS7-STK11 NDUFS7 chr19 1388593 + STK11 chr19 1222985 + Exonic hg38 UCEC TCGA-B5-A3S1-01A 6 13 In-Frame Intra-chr p13.3 p13.3 Oncogene Tumor suppressor gene Seq+ 105515 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC18-RNF216 TNRC18 chr7 5359398 - RNF216 chr7 5725438 - Exonic hg38 UCEC TCGA-B5-A3S1-01A 1 28 In-Frame Intra-chr p22.1 p22.1 Seq+ 105516 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAE1-RPA2 SAE1 chr19 47155213 + RPA2 chr1 27907282 - Exonic hg38 UCEC TCGA-B5-A3S1-01A 3 12 In-Frame Inter-chr q13.32 p35.3 Seq+ 105517 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-IKZF3 ERBB2 chr17 39723660 + IKZF3 chr17 39788374 - Exonic hg38 UCEC TCGA-B5-A3S1-01A 3 7 Out-of-frame Intra-chr q12 Oncogene q21.1 Tumor suppressor gene Transcription factor Seq+ 105518 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM168A-P4HA3 FAM168A chr11 73597923 - P4HA3 chr11 74289130 - Exonic hg38 UCEC TCGA-B5-A3S1-01A 2 11 5'UTR-CDS Intra-chr q13.4 q13.4 Seq+ 105519 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUFU-GBF1 SUFU chr10 102550106 + GBF1 chr10 102351256 + Exonic hg38 UCEC TCGA-B5-A3S1-01A 2 4 In-Frame Intra-chr q24.32 Oncogene Tumor suppressor gene q24.32 Seq+ 105520 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R37-BCL3 PPP1R37 chr19 45093527 + BCL3 chr19 44751227 + Exonic hg38 UCEC TCGA-B5-A3S1-01A 1 5 In-Frame Intra-chr q13.32 q13.32 Oncogene 105521 ChimerSeq TCGA FAWG TCGA_RNA-Seq AARS-PPP1R13B AARS chr16 70258980 - PPP1R13B chr14 103742823 - Exonic hg38 UCEC TCGA-B5-A3S1-01A 1 3 Out-of-frame Inter-chr q22.1 q32.33 Seq+ 105522 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAE1-TBKBP1 SAE1 chr19 47155213 + TBKBP1 chr17 47708394 + Exonic hg38 UCEC TCGA-B5-A3S1-01A 1 3 Out-of-frame Inter-chr q13.32 q21.32 105523 ChimerSeq TCGA FAWG TCGA_RNA-Seq KLC1-MARK3 KLC1 chr14 103657776 + MARK3 chr14 103502882 + Exonic hg38 UCEC TCGA-B5-A3S1-01A 1 2 Out-of-frame Intra-chr q32.33 q32.32 CAMK:CAMKL Seq+ 105524 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP54-PSMA6 USP54 chr10 73571421 - PSMA6 chr14 35317249 + Exonic hg38 UCEC TCGA-B5-A5OD-01A 108 403 Out-of-frame Inter-chr q22.2 q13.2 Seq+ 105525 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIA1-CD82 PPFIA1 chr11 70272436 + CD82 chr11 44587475 + Exonic hg38 UCEC TCGA-B5-A5OD-01A 33 100 5'UTR-5'UTR Intra-chr q13.3 p11.2 Tumor suppressor gene Seq+ 105526 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED25-CCDC155 MED25 chr19 49832415 + CCDC155 chr19 49406886 + Exonic hg38 UCEC TCGA-B5-A5OD-01A 25 122 In-Frame Intra-chr q13.33 q13.33 Seq+ 105527 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALAS1-RBM6 ALAS1 chr3 52208247 + RBM6 chr3 50075201 + Exonic hg38 UCEC TCGA-B5-A5OD-01A 33 76 Out-of-frame Intra-chr p21.2 p21.31 Tumor suppressor gene Seq+ 105528 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNhg38-RAB26 SNhg38 chr16 2154860 - RAB26 chr16 2149941 + Exonic hg38 UCEC TCGA-B5-A5OD-01A 6 127 Out-of-frame Intra-chr p13.3 p13.3 105529 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPT2-TNF PPT2 chr6 32154404 + TNF chr6 31576534 + Exonic hg38 UCEC TCGA-B5-A5OD-01A 14 37 3'UTR-3'UTR Intra-chr Seq+ 105530 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPT2-TNF PPT2 chr6 32154404 + TNF chr6 31576534 + Exonic hg38 UCEC TCGA-B5-A5OD-01A 14 36 3'UTR-3'UTR Intra-chr Seq+ 105531 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUCO-SND1 SUCO chr1 172533497 + SND1 chr7 128074502 + Exonic hg38 UCEC TCGA-B5-A5OD-01A 14 29 Out-of-frame Inter-chr q24.3 q32.1 Seq+ 105532 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD11-SPIRE2 ANKRD11 chr16 89418284 - SPIRE2 chr16 89845322 + Exonic hg38 UCEC TCGA-B5-A5OD-01A 6 16 5'UTR-CDS Intra-chr q24.3 q24.3 Seq+ 105533 ChimerSeq TCGA FAWG TCGA_RNA-Seq MEST-STRIP2 MEST chr7 130503996 + STRIP2 chr7 129480785 + Exonic hg38 UCEC TCGA-B5-A5OD-01A 4 15 Out-of-frame Intra-chr q32.2 q32.1 Seq+ 105534 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPF2-NFAM1 WIPF2 chr17 40219492 + NFAM1 chr22 42411736 - Exonic hg38 UCEC TCGA-B5-A5OD-01A 5 10 5'UTR-CDS Inter-chr q21.2 q13.2 Seq+ 105535 ChimerSeq TCGA FAWG TCGA_RNA-Seq HMGA2-C10orf11 HMGA2 chr12 65838569 + C10orf11 chr10 76557209 + Exonic hg38 UCEC TCGA-B5-A5OD-01A 1 20 Out-of-frame Inter-chr q14.3 Transcription factor Seq+ 105536 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDKN2D-HM13 CDKN2D chr19 10568947 - HM13 chr20 31566210 + Exonic hg38 UCEC TCGA-B5-A5OD-01A 5 3 5'UTR-CDS Inter-chr p13.2 q11.21 Seq+ 105537 ChimerSeq TCGA FAWG TCGA_RNA-Seq RABL2A-IL1RN RABL2A chr2 113628713 + IL1RN chr2 113111116 + Exonic hg38 UCEC TCGA-B5-A5OD-01A 1 8 5'UTR-5'UTR Intra-chr q14.1 q14.1 105538 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOXB3-FAP HOXB3 chr17 48573837 - FAP chr2 162189754 - Exonic hg38 UCEC TCGA-B5-A5OD-01A 1 6 5'UTR-CDS Inter-chr q21.32 Transcription factor q24.2 Seq+ 105539 ChimerSeq TCGA FAWG TCGA_RNA-Seq TCF20-RRAS TCF20 chr22 42343479 - RRAS chr19 49636926 - Exonic hg38 UCEC TCGA-B5-A5OD-01A 1 6 5'UTR-CDS Inter-chr Transcription factor q13.33 105540 ChimerSeq TCGA FAWG TCGA_RNA-Seq STIP1-RTN3 STIP1 chr11 64200293 + RTN3 chr11 63749991 + Exonic hg38 UCEC TCGA-B5-A5OD-01A 1000 1000 Out-of-frame Intra-chr q13.1 q13.1 105541 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL20-GSDMB FBXL20 chr17 39343180 - GSDMB chr17 39917321 - Exonic hg38 UCEC TCGA-B5-A5OE-01A 9 56 CDS-5'UTR Intra-chr q12 q21.1 Seq+ 105542 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED26-ZNF99 MED26 chr19 16627872 - ZNF99 chr19 22769324 - Exonic hg38 UCEC TCGA-B5-A5OE-01A 10 29 In-Frame Intra-chr p13.11 p12 Transcription factor Seq+ 105543 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVR-ZNF233 PVR chr19 44647570 + ZNF233 chr19 44264314 + Exonic hg38 UCEC TCGA-B5-A5OE-01A 9 32 CDS-5'UTR Intra-chr q13.31 q13.31 Transcription factor Seq+ 105544 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD52-RIMKLB RAD52 chr12 949602 - RIMKLB chr12 8773321 + Exonic hg38 UCEC TCGA-B5-A5OE-01A 7 12 5'UTR-5'UTR Intra-chr p13.33 p13.31 Seq+ 105545 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF429-LSM14A ZNF429 chr19 21505774 + LSM14A chr19 34227365 + Exonic hg38 UCEC TCGA-B5-A5OE-01A 1 19 CDS-3'UTR Intra-chr p12 Transcription factor Seq+ 105546 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF563-FDX2 ZNF563 chr19 12333480 - FDX2 chr19 10310940 - Exonic hg38 UCEC TCGA-B5-A5OE-01A 2 13 Out-of-frame Intra-chr p13.2 Transcription factor p13.2 105547 ChimerSeq TCGA FAWG TCGA_RNA-Seq STXBP1-LRSAM1 STXBP1 chr9 127676753 + LRSAM1 chr9 127479839 + Exonic hg38 UCEC TCGA-B5-A5OE-01A 1 16 In-Frame Intra-chr q34.11 q33.3 105548 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL7A-GLTSCR1 BCL7A chr12 122054926 + GLTSCR1 chr19 47694115 + Exonic hg38 UCEC TCGA-B5-A5OE-01A 3 7 Out-of-frame Inter-chr Tumor suppressor gene Seq+ 105549 ChimerSeq TCGA FAWG TCGA_RNA-Seq TARBP1-LYST TARBP1 chr1 234446803 - LYST chr1 235664621 - Exonic hg38 UCEC TCGA-B5-A5OE-01A 3 7 In-Frame Intra-chr q42.2 q42.3 Seq+ 105550 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIMKLB-KMT5A RIMKLB chr12 8754093 + KMT5A chr12 123389433 + Exonic hg38 UCEC TCGA-B5-A5OE-01A 3 6 In-Frame Intra-chr p13.31 q24.31 105551 ChimerSeq TCGA FAWG TCGA_RNA-Seq STX10-C3P1 STX10 chr19 13149029 - C3P1 chr19 10049996 + Exonic hg38 UCEC TCGA-B5-A5OE-01A 1 12 CDS-5'UTR Intra-chr p13.13 p13.2 105552 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF823-SIPA1L3 ZNF823 chr19 11738817 - SIPA1L3 chr19 38029089 + Exonic hg38 UCEC TCGA-B5-A5OE-01A 2 5 5'UTR-5'UTR Intra-chr p13.2 Transcription factor q13.13 Seq+ 105553 ChimerSeq TCGA FAWG TCGA_RNA-Seq CARM1-ZBTB32 CARM1 chr19 10871922 + ZBTB32 chr19 35715757 + Exonic hg38 UCEC TCGA-B5-A5OE-01A 1 1 Out-of-frame Intra-chr p13.2 q13.12 Transcription factor 105554 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZSWIM4-FAM98C ZSWIM4 chr19 13805101 + FAM98C chr19 38403135 + Exonic hg38 UCEC TCGA-B5-A5OE-01A 1000 1000 CDS-5'UTR Intra-chr p13.13 q13.2 105555 ChimerSeq TCGA FAWG TCGA_RNA-Seq SART3-DAO SART3 chr12 108545139 - DAO chr12 108876670 + Exonic hg38 UCEC TCGA-BG-A3PP-01A 37 154 CDS-5'UTR Intra-chr q23.3 q24.11 Seq+ 105556 ChimerSeq TCGA FAWG TCGA_RNA-Seq STAG1-FAM168A STAG1 chr3 136752195 - FAM168A chr11 73468492 - Exonic hg38 UCEC TCGA-BG-A3PP-01A 17 36 5'UTR-5'UTR Inter-chr q22.3 q13.4 Seq+ 105557 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC38A10-OGFOD3 SLC38A10 chr17 81270918 - OGFOD3 chr17 82398319 - Exonic hg38 UCEC TCGA-BG-A3PP-01A 12 32 In-Frame Intra-chr q25.3 q25.3 Seq+ 105558 ChimerSeq TCGA FAWG TCGA_RNA-Seq VAX2-PAIP2B VAX2 chr2 70900868 + PAIP2B chr2 71202600 - Exonic hg38 UCEC TCGA-BG-A3PP-01A 7 42 CDS-5'UTR Intra-chr p13.3 Transcription factor p13.3 Seq+ 105559 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD27-SLC7A9 ANKRD27 chr19 32644325 - SLC7A9 chr19 32830684 - Exonic hg38 UCEC TCGA-BG-A3PP-01A 3 35 Out-of-frame Intra-chr q13.11 q13.11 Seq+ 105560 ChimerSeq TCGA FAWG TCGA_RNA-Seq AKT2-YIF1B AKT2 chr19 40285181 - YIF1B chr19 38309643 - Exonic hg38 UCEC TCGA-BG-A3PP-01A 4 29 5'UTR-5'UTR Intra-chr q13.2 AGC:Akt Oncogene q13.2 Seq+ 105561 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCHSD2-ARHGEF17 FCHSD2 chr11 72867865 - ARHGEF17 chr11 73346883 + Exonic hg38 UCEC TCGA-BG-A3PP-01A 6 21 In-Frame Intra-chr q13.4 q13.4 Seq+ 105562 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP2R1A-ZNF610 PPP2R1A chr19 52225808 + ZNF610 chr19 52365698 + Exonic hg38 UCEC TCGA-BG-A3PP-01A 4 9 In-Frame Intra-chr q13.41 Oncogene q13.41 Transcription factor Seq+ 105563 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF1-C2CD3 DCAF1 chr3 51499873 - C2CD3 chr11 74139828 - Exonic hg38 UCEC TCGA-BG-A3PP-01A 3 5 5'UTR-CDS Inter-chr p21.2 q13.4 105564 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPHA2-MRPL37 EPHA2 chr1 16148378 - MRPL37 chr1 54205018 + Exonic hg38 UCEC TCGA-BG-A3PP-01A 1 11 In-Frame Intra-chr p36.13 Tumor suppressor gene p32.3 105565 ChimerSeq TCGA FAWG TCGA_RNA-Seq WASF2-VANGL1 WASF2 chr1 27489986 - VANGL1 chr1 115651277 + Exonic hg38 UCEC TCGA-BG-A3PP-01A 2 3 5'UTR-5'UTR Intra-chr p36.11 p13.1 Seq+ 105566 ChimerSeq TCGA FAWG TCGA_RNA-Seq HOOK1-IVD HOOK1 chr1 59821943 + IVD chr15 40435417 + Exonic hg38 UCEC TCGA-BG-A3PP-01A 1 4 In-Frame Inter-chr p32.1 q15.1 105567 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPA2-INTS12 PPA2 chr4 105386567 - INTS12 chr4 105700014 - Exonic hg38 UCEC TCGA-BG-A3PP-01A 1 3 CDS-5'UTR Intra-chr q24 q24 105568 ChimerSeq TCGA FAWG TCGA_RNA-Seq GATAD2A-SSBP4 GATAD2A chr19 19386138 + SSBP4 chr19 18427351 + Exonic hg38 UCEC TCGA-BG-A3PP-01A 1 2 5'UTR-CDS Intra-chr p13.11 Transcription factor p13.11 105569 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF26-FOXR1 RNF26 chr11 119334618 + FOXR1 chr11 118971818 + Exonic hg38 UCEC TCGA-BK-A0CA-01A 9 44 Out-of-frame Intra-chr q23.3 Transcription factor Seq+ 105570 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCALD-UBR5 NCALD chr8 102020237 - UBR5 chr8 102361626 - Exonic hg38 UCEC TCGA-BK-A0CA-01A 1 2 5'UTR-CDS Intra-chr q22.3 q22.3 Oncogene Seq+ 105571 ChimerSeq TCGA FAWG TCGA_RNA-Seq SHROOM4-ARID3A SHROOM4 chrX 50813902 - ARID3A chr19 960092 + Exonic hg38 UCEC TCGA-BK-A0CC-01A 29 37 In-Frame Inter-chr p11.22 p13.3 Transcription factor Seq+ 105572 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAD1-PKP1 LAD1 chr1 201386622 - PKP1 chr1 201331424 + Exonic hg38 UCEC TCGA-BK-A0CC-01A 4 15 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 105573 ChimerSeq TCGA FAWG TCGA_RNA-Seq URI1-ARHGAP33 URI1 chr19 29942664 + ARHGAP33 chr19 35784172 + Exonic hg38 UCEC TCGA-BK-A0CC-01A 2 7 Out-of-frame Intra-chr q12 q13.12 Seq+ 105574 ChimerSeq TCGA FAWG TCGA_RNA-Seq PCMTD1-ST18 PCMTD1 chr8 51898930 - ST18 chr8 52172583 - Exonic hg38 UCEC TCGA-BK-A0CC-01A 1 7 Out-of-frame Intra-chr q11.23 q11.23 Transcription factor Seq+ 105575 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP6V1H-RORC ATP6V1H chr8 53841578 - RORC chr1 151817280 - Exonic hg38 UCEC TCGA-BK-A0CC-01A 2 2 Out-of-frame Inter-chr q11.23 q21.3 Transcription factor Seq+ 105576 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATG7-SLC6A1 ATG7 chr3 11272430 + SLC6A1 chr3 11015672 + Exonic hg38 UCEC TCGA-BK-A0CC-01A 1 2 5'UTR-5'UTR Intra-chr p25.3 p25.3 105577 ChimerSeq TCGA FAWG TCGA_RNA-Seq POLR2B-FIP1L1 POLR2B chr4 56979004 + FIP1L1 chr4 53442653 + Exonic hg38 UCEC TCGA-BK-A139-01A 13 28 In-Frame Intra-chr q12 q12 Seq+ 105578 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLG3-UNC5D DLG3 chrX 70479264 + UNC5D chr8 35748527 + Exonic hg38 UCEC TCGA-BK-A139-01A 7 25 In-Frame Inter-chr q13.1 p12 Tumor suppressor gene Seq+ 105579 ChimerSeq TCGA FAWG TCGA_RNA-Seq ESR1-SYNE1 ESR1 chr6 151944508 + SYNE1 chr6 152373219 - Exonic hg38 UCEC TCGA-BK-A139-01A 11 7 Out-of-frame Intra-chr q25.1 Oncogene Tumor suppressor gene Transcription factor q25.2 Oncogene Seq+ 105580 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBA3-FRMD4B UBA3 chr3 69071535 - FRMD4B chr3 69176656 - Exonic hg38 UCEC TCGA-BK-A139-01A 2 7 Out-of-frame Intra-chr p14.1 p14.1 Seq+ 105581 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUZ12-NF1 SUZ12 chr17 31976614 + NF1 chr17 31248984 + Exonic hg38 UCEC TCGA-BK-A139-01A 2 4 In-Frame Intra-chr q11.2 Tumor suppressor gene q11.2 Oncogene Tumor suppressor gene Seq+ 105582 ChimerSeq TCGA FAWG TCGA_RNA-Seq CIPC-LRRC74A CIPC chr14 77098361 + LRRC74A chr14 76852365 + Exonic hg38 UCEC TCGA-BK-A139-01A 2 3 5'UTR-CDS Intra-chr q24.3 q24.3 105583 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC2A12-SGK1 SLC2A12 chr6 134028381 - SGK1 chr6 134262148 - Exonic hg38 UCEC TCGA-BK-A139-01A 2 3 Out-of-frame Intra-chr q23.2 q23.2 AGC:SGK Oncogene Seq+ 105584 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYTH3-FAM220A CYTH3 chr7 6272474 - FAM220A chr7 6331235 - Exonic hg38 UCEC TCGA-BK-A139-01A 1 3 5'UTR-5'UTR Intra-chr p22.1 p22.1 105585 ChimerSeq TCGA FAWG TCGA_RNA-Seq EARS2-COG7 EARS2 chr16 23552149 - COG7 chr16 23418827 - Exonic hg38 UCEC TCGA-BK-A139-01A 1 2 In-Frame Intra-chr p12.2 p12.2 105586 ChimerSeq TCGA FAWG TCGA_RNA-Seq GGNBP2-NR1D1 GGNBP2 chr17 36585450 + NR1D1 chr17 40100266 - Exonic hg38 UCEC TCGA-BK-A26L-01A 7 11 3'UTR-5'UTR Intra-chr Tumor suppressor gene q21.1 Transcription factor Seq+ 105587 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXJ3-TUFT1 FOXJ3 chr1 42278348 - TUFT1 chr1 151562585 + Exonic hg38 UCEC TCGA-BK-A26L-01A 2 11 In-Frame Intra-chr p34.2 Transcription factor q21.3 Seq+ 105588 ChimerSeq TCGA FAWG TCGA_RNA-Seq NLGN4X-DMD NLGN4X chrX 6029280 - DMD chrX 31774192 - Exonic hg38 UCEC TCGA-BK-A26L-01A 1 15 In-Frame Intra-chr p22.31 p21.1 Tumor suppressor gene Seq+ 105589 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRPK1-PXT1 SRPK1 chr6 35838337 - PXT1 chr6 36391874 - Exonic hg38 UCEC TCGA-BK-A26L-01A 2 5 Out-of-frame Intra-chr p21.31 CMGC:SRPK p21.31 Seq+ 105590 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID3B-USP47 ARID3B chr15 74541330 + USP47 chr11 11884467 + Exonic hg38 UCEC TCGA-BK-A26L-01A 1 5 5'UTR-CDS Inter-chr q24.1 Transcription factor p15.3 Seq+ 105591 ChimerSeq TCGA FAWG TCGA_RNA-Seq FNDC3B-PIK3CA FNDC3B chr3 172133546 + PIK3CA chr3 179198750 + Exonic hg38 UCEC TCGA-BK-A56F-01A 14 14 CDS-5'UTR Intra-chr q26.31 q26.32 Oncogene Seq+ 105592 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC14-UPK1B LRRC14 chr8 144524750 + UPK1B chr3 119186718 + Exonic hg38 UCEC TCGA-BK-A6W3-01A 84 0 Out-of-frame Inter-chr q24.3 q13.32 Seq+ 105593 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLIP2-NCF1B CLIP2 chr7 74364315 + NCF1B chr7 73225711 + Exonic hg38 UCEC TCGA-D1-A3DG-01A 19 42 CDS-5'UTR Intra-chr q11.23 q11.23 105594 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM120B-ORAI1 TMEM120B chr12 121761738 + ORAI1 chr12 121641041 + Exonic hg38 UCEC TCGA-D1-A3DG-01A 9 16 CDS-3'UTR Intra-chr q24.31 q24.31 Seq+ 105595 ChimerSeq TCGA FAWG TCGA_RNA-Seq STIM1-CLIP1 STIM1 chr11 3856409 + CLIP1 chr12 122288541 - Exonic hg38 UCEC TCGA-D1-A3DG-01A 5 12 Out-of-frame Inter-chr p15.4 q24.31 Seq+ 105596 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D2B-ACSBG1 TBC1D2B chr15 78003305 - ACSBG1 chr15 78179780 - Exonic hg38 UCEC TCGA-D1-A3DG-01A 3 13 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 105597 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMU1-FAM219A SMU1 chr9 33053123 - FAM219A chr9 34405964 - Exonic hg38 UCEC TCGA-D1-A3DG-01A 2 16 In-Frame Intra-chr p21.1 p13.3 Seq+ 105598 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM234-RUSC1 TMEM234 chr1 32216194 - RUSC1 chr1 155325316 + Exonic hg38 UCEC TCGA-D1-A3DG-01A 3 10 3'UTR-CDS Intra-chr p35.2 q22 Seq+ 105599 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP98-MLXIP NUP98 chr11 3768581 - MLXIP chr12 122127256 + Exonic hg38 UCEC TCGA-D1-A3DG-01A 2 4 3'UTR-3'UTR Inter-chr p15.4 Oncogene Tumor suppressor gene Transcription factor Seq+ 105600 ChimerSeq TCGA FAWG TCGA_RNA-Seq METTL16-RTN4RL1 METTL16 chr17 2438109 - RTN4RL1 chr17 1937808 - Exonic hg38 UCEC TCGA-D1-A3DH-01A 7 35 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 105601 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRK-MTRF1L PTPRK chr6 128397566 - MTRF1L chr6 152991321 - Exonic hg38 UCEC TCGA-D1-A3DH-01A 3 22 5'UTR-CDS Intra-chr Tumor suppressor gene q25.2 Seq+ 105602 ChimerSeq TCGA FAWG TCGA_RNA-Seq TULP4-RPS12 TULP4 chr6 158314268 + RPS12 chr6 132814732 + Exonic hg38 UCEC TCGA-D1-A3DH-01A 3 18 CDS-5'UTR Intra-chr q25.3 q23.2 Seq+ 105603 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITPR1-BHLHE40 ITPR1 chr3 4766710 + BHLHE40 chr3 4982836 + Exonic hg38 UCEC TCGA-D1-A3DH-01A 5 8 In-Frame Intra-chr p26.1 p26.1 Transcription factor Seq+ 105604 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNA-KCNIP4 PITPNA chr17 1548296 - KCNIP4 chr4 20850667 - Exonic hg38 UCEC TCGA-D1-A3DH-01A 1 19 In-Frame Inter-chr p13.3 p15.2 105605 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACNG5-PRKCA CACNG5 chr17 66835250 + PRKCA chr17 66773987 + Exonic hg38 UCEC TCGA-D1-A3DH-01A 2 4 5'UTR-CDS Intra-chr q24.2 q24.2 Seq+ 105606 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBMS2-TNFAIP3 RBMS2 chr12 56582152 + TNFAIP3 chr6 137874845 + Exonic hg38 UCEC TCGA-D1-A3DH-01A 1 8 Out-of-frame Inter-chr q13.3 q23.3 Oncogene Tumor suppressor gene 105607 ChimerSeq TCGA FAWG TCGA_RNA-Seq AIG1-COL8A1 AIG1 chr6 143165183 + COL8A1 chr3 99790680 + Exonic hg38 UCEC TCGA-D1-A3DH-01A 2 2 5'UTR-5'UTR Inter-chr q24.2 q12.1 Seq+ 105608 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD8-SPINT2 PSMD8 chr19 38374961 + SPINT2 chr19 38283627 + Exonic hg38 UCEC TCGA-D1-A3DH-01A 1 6 Out-of-frame Intra-chr q13.2 q13.2 Tumor suppressor gene 105609 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB20-IFT57 ZBTB20 chr3 114900304 - IFT57 chr3 108167864 - Exonic hg38 UCEC TCGA-D1-A3DH-01A 1 6 5'UTR-CDS Intra-chr q13.31 Transcription factor q13.13 105610 ChimerSeq TCGA FAWG TCGA_RNA-Seq CALCB-INSC CALCB chr11 15077470 + INSC chr11 15149130 + Exonic hg38 UCEC TCGA-D1-A3DH-01A 1000 1000 3'UTR-CDS Intra-chr p15.2 p15.2 105611 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTMR3-CLIP2 MTMR3 chr22 29883359 + CLIP2 chr7 74397074 + Exonic hg38 UCEC TCGA-D1-A3JP-01A 27 36 5'UTR-CDS Inter-chr q12.2 q11.23 Seq+ 105612 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-CNIH4 ERBB2 chr17 39710481 + CNIH4 chr1 224365879 + Exonic hg38 UCEC TCGA-D1-A3JP-01A 7 58 Out-of-frame Inter-chr q12 Oncogene q42.11 Seq+ 105613 ChimerSeq TCGA FAWG TCGA_RNA-Seq NVL-SUSD4 NVL chr1 224330071 - SUSD4 chr1 223268675 - Exonic hg38 UCEC TCGA-D1-A3JP-01A 11 42 Out-of-frame Intra-chr q42.11 q41 Seq+ 105614 ChimerSeq TCGA FAWG TCGA_RNA-Seq B3GNT3-INSL3 B3GNT3 chr19 17795206 + INSL3 chr19 17817059 - Exonic hg38 UCEC TCGA-D1-A3JP-01A 11 19 5'UTR-CDS Intra-chr p13.11 p13.11 Seq+ 105615 ChimerSeq TCGA FAWG TCGA_RNA-Seq AHDC1-TAF12 AHDC1 chr1 27603397 - TAF12 chr1 28618030 - Exonic hg38 UCEC TCGA-D1-A3JP-01A 5 36 5'UTR-CDS Intra-chr p35.3 Transcription factor p35.3 Seq+ 105616 ChimerSeq TCGA FAWG TCGA_RNA-Seq TXNRD2-RTN4R TXNRD2 chr22 19931030 - RTN4R chr22 20243110 - Exonic hg38 UCEC TCGA-D1-A3JP-01A 9 12 In-Frame Intra-chr q11.21 q11.21 Seq+ 105617 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM123-MMP10 TMEM123 chr11 102448812 - MMP10 chr11 102779361 - Exonic hg38 UCEC TCGA-D1-A3JP-01A 5 25 Out-of-frame Intra-chr q22.2 q22.2 Seq+ 105618 ChimerSeq TCGA FAWG TCGA_RNA-Seq BPTF-RAD17 BPTF chr17 67875744 + RAD17 chr5 69396397 + Exonic hg38 UCEC TCGA-D1-A3JP-01A 5 21 CDS-3'UTR Inter-chr q24.2 Transcription factor Seq+ 105619 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABLIM1-PDE6B ABLIM1 chr10 114526660 - PDE6B chr4 634677 + Exonic hg38 UCEC TCGA-D1-A3JP-01A 3 27 5'UTR-CDS Inter-chr q25.3 p16.3 Seq+ 105620 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRABD2B-SKINT1L TRABD2B chr1 47994034 - SKINT1L chr1 48096590 - Exonic hg38 UCEC TCGA-D1-A3JP-01A 4 16 CDS-3'UTR Intra-chr p33 p33 105621 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMG1-EMC8 SMG1 chr16 18845429 - EMC8 chr16 85771891 - Exonic hg38 UCEC TCGA-D1-A3JP-01A 4 13 CDS-3'UTR Intra-chr p12.3 Atypical:PIKK q24.1 Seq+ 105622 ChimerSeq TCGA FAWG TCGA_RNA-Seq PGS1-CXCR5 PGS1 chr17 78399537 + CXCR5 chr11 118883852 + Exonic hg38 UCEC TCGA-D1-A3JP-01A 3 16 5'UTR-5'UTR Inter-chr q25.3 q23.3 Seq+ 105623 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREBBP-RANBP3 CREBBP chr16 3850297 - RANBP3 chr19 5951596 - Exonic hg38 UCEC TCGA-D1-A3JP-01A 1 19 In-Frame Inter-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 105624 ChimerSeq TCGA FAWG TCGA_RNA-Seq DCAF15-CEBPG DCAF15 chr19 13954661 + CEBPG chr19 33379144 + Exonic hg38 UCEC TCGA-D1-A3JP-01A 3 11 CDS-5'UTR Intra-chr p13.12 q13.11 Transcription factor Seq+ 105625 ChimerSeq TCGA FAWG TCGA_RNA-Seq NACC1-TDRD12 NACC1 chr19 13118454 + TDRD12 chr19 32790531 + Exonic hg38 UCEC TCGA-D1-A3JP-01A 5 2 5'UTR-CDS Intra-chr p13.13 q13.11 Seq+ 105626 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEPD-CEBPG PEPD chr19 33411672 - CEBPG chr19 33379144 + Exonic hg38 UCEC TCGA-D1-A3JP-01A 3 10 CDS-5'UTR Intra-chr q13.11 q13.11 Transcription factor Seq+ 105627 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R16A-MROH1 PPP1R16A chr8 144497453 + MROH1 chr8 144199122 + Exonic hg38 UCEC TCGA-D1-A3JP-01A 3 9 Out-of-frame Intra-chr q24.3 q24.3 Seq+ 105628 ChimerSeq TCGA FAWG TCGA_RNA-Seq ORMDL3-PPP1R1B ORMDL3 chr17 39924030 - PPP1R1B chr17 39629170 + Exonic hg38 UCEC TCGA-D1-A3JP-01A 2 10 In-Frame Intra-chr q21.1 q12 Tumor suppressor gene Seq+ 105629 ChimerSeq TCGA FAWG TCGA_RNA-Seq NVL-ZPBP2 NVL chr1 224268034 - ZPBP2 chr17 39870694 + Exonic hg38 UCEC TCGA-D1-A3JP-01A 3 3 In-Frame Inter-chr q42.11 q21.1 Seq+ 105630 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM175-ATP9A TMEM175 chr4 955890 + ATP9A chr20 51601347 - Exonic hg38 UCEC TCGA-D1-A3JP-01A 1 7 Out-of-frame Inter-chr p16.3 q13.2 Seq+ 105631 ChimerSeq TCGA FAWG TCGA_RNA-Seq CBFB-CA7 CBFB chr16 67066798 + CA7 chr16 66847030 + Exonic hg38 UCEC TCGA-D1-A3JP-01A 1 4 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 105632 ChimerSeq TCGA FAWG TCGA_RNA-Seq ULK4-FBXO44 ULK4 chr3 41705057 - FBXO44 chr1 11655806 + Exonic hg38 UCEC TCGA-D1-A3JP-01A 1 4 CDS-5'UTR Inter-chr p22.1 Other:ULK p36.22 Seq+ 105633 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZBTB17-DLC1 ZBTB17 chr1 15973039 - DLC1 chr8 13115657 - Exonic hg38 UCEC TCGA-D1-A3JQ-01A 27 66 5'UTR-5'UTR Inter-chr p36.13 Transcription factor p22 Tumor suppressor gene Seq+ 105634 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL29-ACY1 RPL29 chr3 51993730 - ACY1 chr3 51986204 + Exonic hg38 UCEC TCGA-D1-A3JQ-01A 8 26 Out-of-frame Intra-chr p21.2 p21.2 Tumor suppressor gene Seq+ 105635 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC25A-SLC26A6 CDC25A chr3 48187778 - SLC26A6 chr3 48629711 - Exonic hg38 UCEC TCGA-D1-A3JQ-01A 4 23 In-Frame Intra-chr p21.31 p21.31 Seq+ 105636 ChimerSeq TCGA FAWG TCGA_RNA-Seq PADI3-EIF4G3 PADI3 chr1 17280796 + EIF4G3 chr1 20930248 - Exonic hg38 UCEC TCGA-D1-A3JQ-01A 7 9 3'UTR-3'UTR Intra-chr p36.12 Seq+ 105637 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNK1-GIPC1 WNK1 chr12 754324 + GIPC1 chr19 14492912 - Exonic hg38 UCEC TCGA-D1-A3JQ-01A 2 20 CDS-5'UTR Inter-chr p13.33 p13.12 Seq+ 105638 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMTC1-PGD TMTC1 chr12 29751666 - PGD chr1 10399629 + Exonic hg38 UCEC TCGA-D1-A3JQ-01A 3 8 In-Frame Inter-chr p11.22 p36.22 Seq+ 105639 ChimerSeq TCGA FAWG TCGA_RNA-Seq KAZN-MTOR KAZN chr1 14924572 + MTOR chr1 11146791 - Exonic hg38 UCEC TCGA-D1-A3JQ-01A 3 6 In-Frame Intra-chr p36.21 p36.22 Oncogene Seq+ 105640 ChimerSeq TCGA FAWG TCGA_RNA-Seq ILF3-ZNF441 ILF3 chr19 10671535 + ZNF441 chr19 11778330 + Exonic hg38 UCEC TCGA-D1-A3JQ-01A 2 6 Out-of-frame Intra-chr p13.2 p13.2 Transcription factor Seq+ 105641 ChimerSeq TCGA FAWG TCGA_RNA-Seq P3H4-ACLY P3H4 chr17 41806796 - ACLY chr17 41873965 - Exonic hg38 UCEC TCGA-D1-A3JQ-01A 1 7 In-Frame Intra-chr q21.2 q21.2 105642 ChimerSeq TCGA FAWG TCGA_RNA-Seq PNPLA7-TPRN PNPLA7 chr9 137505614 - TPRN chr9 137192691 - Exonic hg38 UCEC TCGA-D1-A3JQ-01A 2 3 In-Frame Intra-chr q34.3 q34.3 Seq+ 105643 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMK2B-SLC25A17 CAMK2B chr7 44231006 - SLC25A17 chr22 40779125 - Exonic hg38 UCEC TCGA-D1-A3JQ-01A 1 6 In-Frame Inter-chr p13 q13.2 105644 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF13B-EYA2 KIF13B chr8 29092745 - EYA2 chr20 47143059 + Exonic hg38 UCEC TCGA-DF-A2KR-01A 50 129 In-Frame Inter-chr p12 q13.12 Seq+ 105645 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHC2-NLRP4 PHC2 chr1 33349597 - NLRP4 chr19 55870827 + Exonic hg38 UCEC TCGA-DF-A2KR-01A 27 33 5'UTR-CDS Inter-chr p35.1 q13.43 Seq+ 105646 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC42EP4-COMMD1 CDC42EP4 chr17 73311893 - COMMD1 chr2 62000701 + Exonic hg38 UCEC TCGA-DF-A2KR-01A 15 49 5'UTR-5'UTR Inter-chr q25.1 p15 Seq+ 105647 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF148-AGXT ZNF148 chr3 125288103 - AGXT chr2 240871349 + Exonic hg38 UCEC TCGA-DF-A2KR-01A 6 23 In-Frame Inter-chr q21.2 Transcription factor q37.3 Seq+ 105648 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTIF-C5orf56 CTIF chr18 48761689 + C5orf56 chr5 132449650 + Exonic hg38 UCEC TCGA-DF-A2KR-01A 6 19 3'UTR-5'UTR Inter-chr q31.1 Seq+ 105649 ChimerSeq TCGA FAWG TCGA_RNA-Seq FMNL2-WDYHV1 FMNL2 chr2 152647935 + WDYHV1 chr8 123435442 + Exonic hg38 UCEC TCGA-DF-A2KR-01A 4 9 3'UTR-5'UTR Inter-chr q23.3 q24.13 Seq+ 105650 ChimerSeq TCGA FAWG TCGA_RNA-Seq C5orf56-CTIF C5orf56 chr5 132419940 + CTIF chr18 48817221 + Exonic hg38 UCEC TCGA-DF-A2KR-01A 2 5 5'UTR-3'UTR Inter-chr q31.1 Seq+ 105651 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAD2-KHDRBS3 ATAD2 chr8 123333878 - KHDRBS3 chr8 135521237 + Exonic hg38 UCEC TCGA-DF-A2KR-01A 2 4 In-Frame Intra-chr q24.13 q24.23 Seq+ 105652 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2CD5-ST8SIA1 C2CD5 chr12 22453896 - ST8SIA1 chr12 22326341 - Exonic hg38 UCEC TCGA-DF-A2KR-01A 1 2 CDS-5'UTR Intra-chr p12.1 p12.1 105653 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHF1-SLC35A4 PLEKHF1 chr19 29675154 + SLC35A4 chr5 140568742 + Exonic hg38 UCEC TCGA-DI-A2QT-01A 3 2 Out-of-frame Inter-chr q12 q31.3 Seq+ 105654 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB4-SDCCAG8 ERBB4 chr2 211561903 - SDCCAG8 chr1 243270092 + Exonic hg38 UCEC TCGA-DI-A2QT-01A 1 1 CDS-3'UTR Inter-chr q34 Oncogene Tumor suppressor gene 105655 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO5B-COX6C MYO5B chr18 49974350 - COX6C chr8 99892052 - Exonic hg38 UCEC TCGA-DI-A2QY-01A 9 60 CDS-5'UTR Inter-chr q21.1 q22.2 Seq+ 105656 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTLC3-AS3 SPTLC3 chr20 13009384 + AS3 chr7 27151575 + Exonic hg38 UCEC TCGA-DI-A2QY-01A 2 10 Out-of-frame Inter-chr p12.1 Tumor suppressor gene 105657 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRAS1-MGMT FRAS1 chr4 78422000 + MGMT chr10 129536241 + Exonic hg38 UCEC TCGA-DI-A2QY-01A 1 10 CDS-5'UTR Inter-chr q21.21 q26.3 Seq+ 105658 ChimerSeq TCGA FAWG TCGA_RNA-Seq APAF1-LRRIQ1 APAF1 chr12 98699569 + LRRIQ1 chr12 85244789 + Exonic hg38 UCEC TCGA-DI-A2QY-01A 1 4 In-Frame Intra-chr q23.1 Tumor suppressor gene q21.31 Seq+ 105659 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERGIC3-MAP1LC3A ERGIC3 chr20 35548865 + MAP1LC3A chr20 34559208 + Exonic hg38 UCEC TCGA-E6-A8L9-01A 317 917 In-Frame Intra-chr q11.22 q11.22 Seq+ 105660 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDLR-MRPL4 LDLR chr19 11107514 + MRPL4 chr19 10258222 + Exonic hg38 UCEC TCGA-E6-A8L9-01A 369 663 In-Frame Intra-chr p13.2 p13.2 Seq+ 105661 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT9-MGAT5B SEPT9 chr17 77373552 + MGAT5B chr17 76937988 + Exonic hg38 UCEC TCGA-E6-A8L9-01A 29 92 Out-of-frame Intra-chr q25.2 Seq+ 105662 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAR-UBE2J2 ADAR chr1 154627855 - UBE2J2 chr1 1267992 - Exonic hg38 UCEC TCGA-E6-A8L9-01A 11 124 5'UTR-5'UTR Intra-chr q21.3 p36.33 Seq+ 105663 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIOBP-CDC42EP1 TRIOBP chr22 37701479 + CDC42EP1 chr22 37566072 + Exonic hg38 UCEC TCGA-E6-A8L9-01A 8 48 CDS-5'UTR Intra-chr q13.1 q13.1 Seq+ 105664 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPECC1-STAMBP SPECC1 chr17 20260294 + STAMBP chr2 73873352 + Exonic hg38 UCEC TCGA-E6-A8L9-01A 13 27 CDS-5'UTR Inter-chr p11.2 p13.1 Seq+ 105665 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRP68-QRICH2 SRP68 chr17 76050428 - QRICH2 chr17 76291412 - Exonic hg38 UCEC TCGA-E6-A8L9-01A 7 26 In-Frame Intra-chr q25.1 q25.1 Seq+ 105666 ChimerSeq TCGA FAWG TCGA_RNA-Seq RGS3-BSPRY RGS3 chr9 113584427 + BSPRY chr9 113354240 + Exonic hg38 UCEC TCGA-E6-A8L9-01A 4 27 In-Frame Intra-chr q32 q32 Seq+ 105667 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM222B-MYO18A FAM222B chr17 28842682 - MYO18A chr17 29167021 - Exonic hg38 UCEC TCGA-E6-A8L9-01A 5 20 5'UTR-5'UTR Intra-chr q11.2 q11.2 Oncogene Seq+ 105668 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRRC8A-MEN1 LRRC8A chr9 128882250 + MEN1 chr11 64810905 - Exonic hg38 UCEC TCGA-E6-A8L9-01A 5 10 5'UTR-5'UTR Inter-chr q34.11 q13.1 Oncogene Tumor suppressor gene Seq+ 105669 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC6B-PES1 TNRC6B chr22 40156182 + PES1 chr22 30605517 - Exonic hg38 UCEC TCGA-E6-A8L9-01A 2 18 CDS-5'UTR Intra-chr q13.1 q12.2 Seq+ 105670 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMIM4-NISCH SMIM4 chr3 52536773 + NISCH chr3 52470859 + Exonic hg38 UCEC TCGA-E6-A8L9-01A 2 17 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 105671 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDC1-SSBP3 NDC1 chr1 53787158 - SSBP3 chr1 54281527 - Exonic hg38 UCEC TCGA-E6-A8L9-01A 5 3 In-Frame Intra-chr p32.3 p32.3 Seq+ 105672 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R37-ALOX15B PPP1R37 chr19 45093527 + ALOX15B chr17 8046907 + Exonic hg38 UCEC TCGA-E6-A8L9-01A 1 17 Out-of-frame Inter-chr q13.32 p13.1 Tumor suppressor gene Seq+ 105673 ChimerSeq TCGA FAWG TCGA_RNA-Seq TET3-SPECC1 TET3 chr2 74003166 + SPECC1 chr17 20096631 + Exonic hg38 UCEC TCGA-E6-A8L9-01A 2 8 CDS-5'UTR Inter-chr p13.1 Transcription factor p11.2 Seq+ 105674 ChimerSeq TCGA FAWG TCGA_RNA-Seq CIT-SPPL3 CIT chr12 119752050 - SPPL3 chr12 120766372 - Exonic hg38 UCEC TCGA-E6-A8L9-01A 1 11 Out-of-frame Intra-chr q24.23 q24.31 105675 ChimerSeq TCGA FAWG TCGA_RNA-Seq RGS12-PDZRN3 RGS12 chr4 3318051 + PDZRN3 chr3 73608684 - Exonic hg38 UCEC TCGA-E6-A8L9-01A 1 6 In-Frame Inter-chr p16.3 p13 Seq+ 105676 ChimerSeq TCGA FAWG TCGA_RNA-Seq ST7L-AP2A2 ST7L chr1 112618909 - AP2A2 chr11 1009100 + Exonic hg38 UCEC TCGA-E6-A8L9-01A 1 5 CDS-3'UTR Inter-chr p13.2 p15.5 Seq+ 105677 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNN2-ARID3A CNN2 chr19 1036562 + ARID3A chr19 929262 + Exonic hg38 UCEC TCGA-E6-A8L9-01A 1000 1000 CDS-5'UTR Intra-chr p13.3 p13.3 Transcription factor 105678 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPKAPK2-PLA2G2A MAPKAPK2 chr1 206685508 + PLA2G2A chr1 19978879 - Exonic hg38 UCEC TCGA-EO-A1Y7-01A 73 135 CDS-5'UTR Intra-chr q32.1 CAMK:MAPKAPK p36.13 Tumor suppressor gene Seq+ 105679 ChimerSeq TCGA FAWG TCGA_RNA-Seq PEX11A-MESP1 PEX11A chr15 89690577 - MESP1 chr15 89750227 - Exonic hg38 UCEC TCGA-EO-A1Y7-01A 50 147 Out-of-frame Intra-chr q26.1 q26.1 Transcription factor Seq+ 105680 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN4-CFAP221 PTPN4 chr2 119809991 + CFAP221 chr2 119651974 + Exonic hg38 UCEC TCGA-EO-A1Y7-01A 14 49 Out-of-frame Intra-chr q14.2 q14.2 105681 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKP2-EXOSC10 SKP2 chr5 36153042 + EXOSC10 chr1 11072171 - Exonic hg38 UCEC TCGA-EO-A1Y7-01A 4 43 Out-of-frame Inter-chr p13.2 Tumor suppressor gene p36.22 Seq+ 105682 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSNK1A1-PDE6A CSNK1A1 chr5 149550075 - PDE6A chr5 149899524 - Exonic hg38 UCEC TCGA-EO-A1Y7-01A 6 18 Out-of-frame Intra-chr q32 Tumor suppressor gene q32 Seq+ 105683 ChimerSeq TCGA FAWG TCGA_RNA-Seq FPGS-GARNL3 FPGS chr9 127813323 + GARNL3 chr9 127383438 + Exonic hg38 UCEC TCGA-EO-A1Y7-01A 4 6 Out-of-frame Intra-chr q34.11 q33.3 Seq+ 105684 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R16A-SLC52A2 PPP1R16A chr8 144478127 + SLC52A2 chr8 144359184 + Exonic hg38 UCEC TCGA-EO-A1Y7-01A 2 11 5'UTR-3'UTR Intra-chr q24.3 q24.3 Seq+ 105685 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPX2-DEFB123 TPX2 chr20 31771682 + DEFB123 chr20 31450029 + Exonic hg38 UCEC TCGA-EO-A1Y7-01A 3 7 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 105686 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTAGE5-PNN CTAGE5 chr14 39348977 + PNN chr14 39179091 + Exonic hg38 UCEC TCGA-EO-A1Y7-01A 1 7 Out-of-frame Intra-chr q21.1 q21.1 Tumor suppressor gene 105687 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAIP-MST1 TRAIP chr3 49847525 - MST1 chr3 49685962 - Exonic hg38 UCEC TCGA-EO-A1Y7-01A 2 2 Out-of-frame Intra-chr p21.31 p21.31 STE:STE20 Tumor suppressor gene Seq+ 105688 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPIN1-SARS LPIN1 chr2 11795487 + SARS chr1 109223978 + Exonic hg38 UCEC TCGA-EO-A1Y7-01A 1 4 Out-of-frame Inter-chr p25.1 p13.3 105689 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP3-LHFPL4 SRGAP3 chr3 9248885 - LHFPL4 chr3 9506203 - Exonic hg38 UCEC TCGA-EO-A1Y7-01A 1 3 In-Frame Intra-chr p25.3 Tumor suppressor gene p25.3 Seq+ 105690 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICALL1-EIF3L MICALL1 chr22 37927826 + EIF3L chr22 37886765 + Exonic hg38 UCEC TCGA-EO-A22U-01A 1 10 In-Frame Intra-chr q13.1 q13.1 Seq+ 105691 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM104-SLC9A3R1 TMEM104 chr17 74777375 + SLC9A3R1 chr17 74762012 + Exonic hg38 UCEC TCGA-EO-A3AS-01A 10 16 In-Frame Intra-chr q25.1 q25.1 Tumor suppressor gene Seq+ 105692 ChimerSeq TCGA FAWG TCGA_RNA-Seq RGL2-DAXX RGL2 chr6 33298455 - DAXX chr6 33324030 - Exonic hg38 UCEC TCGA-EO-A3AS-01A 4 30 5'UTR-5'UTR Intra-chr Oncogene Seq+ 105693 ChimerSeq TCGA FAWG TCGA_RNA-Seq PMVK-PYGO2 PMVK chr1 154932352 - PYGO2 chr1 154959846 - Exonic hg38 UCEC TCGA-EO-A3AS-01A 3 30 In-Frame Intra-chr q21.3 q21.3 Seq+ 105694 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELMO1-HDAC9 ELMO1 chr7 37448675 - HDAC9 chr7 18496262 + Exonic hg38 UCEC TCGA-EO-A3AS-01A 3 19 5'UTR-5'UTR Intra-chr p14.1 p21.1 Seq+ 105695 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALK-SCEL ALK chr2 29531915 - SCEL chr13 77627947 + Exonic hg38 UCEC TCGA-EO-A3AS-01A 4 14 In-Frame Inter-chr p23.1 TK:ALK Oncogene q22.3 Seq+ 105696 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP9X-CD244 USP9X chrX 41086109 + CD244 chr1 160839049 - Exonic hg38 UCEC TCGA-EO-A3AS-01A 2 9 5'UTR-CDS Inter-chr p11.4 Oncogene q23.3 Seq+ 105697 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGB5-HDAC9 ITGB5 chr3 124769013 - HDAC9 chr7 18496262 + Exonic hg38 UCEC TCGA-EO-A3AS-01A 1 10 In-Frame Inter-chr q21.2 p21.1 Seq+ 105698 ChimerSeq TCGA FAWG TCGA_RNA-Seq LOXL3-M1AP LOXL3 chr2 74550185 - M1AP chr2 74558874 - Exonic hg38 UCEC TCGA-EO-A3AS-01A 2 3 In-Frame Intra-chr p13.1 p13.1 Seq+ 105699 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP34-CCDC117 USP34 chr2 61470650 - CCDC117 chr22 28773725 + Exonic hg38 UCEC TCGA-EO-A3AS-01A 1 4 Out-of-frame Inter-chr p15 q12.1 Seq+ 105700 ChimerSeq TCGA FAWG TCGA_RNA-Seq FARP2-INHA FARP2 chr2 241373290 + INHA chr2 219574694 + Exonic hg38 UCEC TCGA-EO-A3AV-01A 4 21 Out-of-frame Intra-chr q37.3 q35 Seq+ 105701 ChimerSeq TCGA FAWG TCGA_RNA-Seq C1orf186-NDUFS6 C1orf186 chr1 206053265 + NDUFS6 chr5 1814339 + Exonic hg38 UCEC TCGA-EO-A3AV-01A 1 1 Out-of-frame Inter-chr q32.1 p15.33 105702 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTGR2-NDUFB2 PTGR2 chr14 73874214 + NDUFB2 chr7 140702866 + Exonic hg38 UCEC TCGA-EO-A3AZ-01A 1 1 Out-of-frame Inter-chr q24.3 q34 105703 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPFIBP1-WNT7A PPFIBP1 chr12 27524365 + WNT7A chr3 13819423 - Exonic hg38 UCEC TCGA-EO-A3B1-01A 5 85 5'UTR-CDS Inter-chr p11.23 p25.1 Tumor suppressor gene Seq+ 105704 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF13B-TMEM217 KIF13B chr8 29245346 - TMEM217 chr6 37219041 - Exonic hg38 UCEC TCGA-EO-A3B1-01A 1 16 CDS-5'UTR Inter-chr p12 p21.2 Seq+ 105705 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTEN-HECTD2 PTEN chr10 87864624 + HECTD2 chr10 91500502 + Exonic hg38 UCEC TCGA-EO-A3B1-01A 3 4 3'UTR-CDS Intra-chr q23.31 Oncogene Tumor suppressor gene q23.32 Seq+ 105706 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARVA-SPON1 PARVA chr11 12477949 + SPON1 chr11 14135420 + Exonic hg38 UCEC TCGA-EO-A3KU-01A 13 19 In-Frame Intra-chr p15.3 p15.2 Seq+ 105707 ChimerSeq TCGA FAWG TCGA_RNA-Seq TEAD1-CTR9 TEAD1 chr11 12902113 + CTR9 chr11 10763431 + Exonic hg38 UCEC TCGA-EO-A3KU-01A 7 27 In-Frame Intra-chr p15.3 Transcription factor p15.4 Seq+ 105708 ChimerSeq TCGA FAWG TCGA_RNA-Seq NDUFV2-TRIM5 NDUFV2 chr18 9126907 + TRIM5 chr11 5667711 - Exonic hg38 UCEC TCGA-EO-A3KU-01A 8 18 Out-of-frame Inter-chr p11.22 p15.4 Seq+ 105709 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMD4B-GMFG SAMD4B chr19 39354066 + GMFG chr19 39333126 - Exonic hg38 UCEC TCGA-EO-A3KU-01A 1 46 5'UTR-CDS Intra-chr q13.2 q13.2 Seq+ 105710 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA2-FAM49B NCOA2 chr8 70138203 - FAM49B chr8 129862334 - Exonic hg38 UCEC TCGA-EO-A3KU-01A 1 5 Out-of-frame Intra-chr q13.3 Oncogene Transcription factor q24.21 105711 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP54-UBE2W USP54 chr10 73541375 - UBE2W chr8 73830472 - Exonic hg38 UCEC TCGA-EO-A3KU-01A 1 4 In-Frame Inter-chr q22.2 q21.11 105712 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPRIN1-THOC1 CAPRIN1 chr11 34053039 + THOC1 chr18 224994 - Exonic hg38 UCEC TCGA-EO-A3KU-01A 1000 1000 Out-of-frame Inter-chr p13 p11.32 105713 ChimerSeq TCGA FAWG TCGA_RNA-Seq CASP8-VMP1 CASP8 chr2 201285317 + VMP1 chr17 59838295 + Exonic hg38 UCEC TCGA-EO-A3KW-01A 30 102 In-Frame Inter-chr q33.1 Oncogene Tumor suppressor gene q23.1 Seq+ 105714 ChimerSeq TCGA FAWG TCGA_RNA-Seq BIRC6-MATN3 BIRC6 chr2 32416163 + MATN3 chr2 20006310 - Exonic hg38 UCEC TCGA-EO-A3KW-01A 11 41 In-Frame Intra-chr p22.3 p24.1 Seq+ 105715 ChimerSeq TCGA FAWG TCGA_RNA-Seq NF1-YPEL5 NF1 chr17 31201485 + YPEL5 chr2 30156628 + Exonic hg38 UCEC TCGA-EO-A3KW-01A 3 21 CDS-5'UTR Inter-chr q11.2 Oncogene Tumor suppressor gene p23.1 Seq+ 105716 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM168A-COA4 FAM168A chr11 73597923 - COA4 chr11 73873394 - Exonic hg38 UCEC TCGA-EO-A3KW-01A 4 14 5'UTR-5'UTR Intra-chr q13.4 q13.4 Seq+ 105717 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPTN-ECI1 NPTN chr15 73633125 - ECI1 chr16 2251429 - Exonic hg38 UCEC TCGA-EO-A3KW-01A 5 10 In-Frame Inter-chr q24.1 p13.3 Seq+ 105718 ChimerSeq TCGA FAWG TCGA_RNA-Seq P4HA1-CFAP70 P4HA1 chr10 73096766 - CFAP70 chr10 73299665 - Exonic hg38 UCEC TCGA-EO-A3KW-01A 1 23 5'UTR-CDS Intra-chr q22.1 q22.2 105719 ChimerSeq TCGA FAWG TCGA_RNA-Seq CYB561D2-RBM6 CYB561D2 chr3 50351560 + RBM6 chr3 50048245 + Exonic hg38 UCEC TCGA-EO-A3KW-01A 5 5 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene Seq+ 105720 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDYL-AS2 CDYL chr6 4892379 + AS2 chr10 77147652 + Exonic hg38 UCEC TCGA-EO-A3KW-01A 2 13 Out-of-frame Inter-chr p25.1 105721 ChimerSeq TCGA FAWG TCGA_RNA-Seq KHDRBS1-SERINC2 KHDRBS1 chr1 32031640 + SERINC2 chr1 31423693 + Exonic hg38 UCEC TCGA-EO-A3KW-01A 1 7 In-Frame Intra-chr p35.2 p35.2 105722 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPRC5C-KIF19 GPRC5C chr17 74432523 + KIF19 chr17 74343024 + Exonic hg38 UCEC TCGA-EO-A3KX-01A 1 7 5'UTR-CDS Intra-chr q25.1 q25.1 105723 ChimerSeq TCGA FAWG TCGA_RNA-Seq HACD3-URM1 HACD3 chr15 65558731 + URM1 chr9 128387816 + Exonic hg38 UCEC TCGA-EY-A210-01A 90 230 In-Frame Inter-chr q22.31 q34.11 Seq+ 105724 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTOR-GARNL3 MTOR chr1 11157152 - GARNL3 chr9 127388904 + Exonic hg38 UCEC TCGA-EY-A210-01A 3 22 Out-of-frame Inter-chr p36.22 Oncogene q33.3 Seq+ 105725 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO9A-GRB2 MYO9A chr15 72117680 - GRB2 chr17 75332797 - Exonic hg38 UCEC TCGA-EY-A210-01A 5 13 5'UTR-CDS Inter-chr q23 q25.1 Seq+ 105726 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPECC1L-HACD3 SPECC1L chr22 24270983 + HACD3 chr15 65551676 + Exonic hg38 UCEC TCGA-EY-A210-01A 4 12 5'UTR-CDS Inter-chr q11.23 q22.31 105727 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID3A-MORC2 ARID3A chr19 929896 + MORC2 chr22 30932769 - Exonic hg38 UCEC TCGA-EY-A2ON-01A 81 428 In-Frame Inter-chr p13.3 Transcription factor q12.2 Seq+ 105728 ChimerSeq TCGA FAWG TCGA_RNA-Seq STX5-ASIP STX5 chr11 62824166 - ASIP chr20 34260365 + Exonic hg38 UCEC TCGA-EY-A2ON-01A 3 14 CDS-5'UTR Inter-chr q12.3 q11.22 Seq+ 105729 ChimerSeq TCGA FAWG TCGA_RNA-Seq AFF1-GAST AFF1 chr4 86948571 + GAST chr17 41715432 + Exonic hg38 UCEC TCGA-EY-A2ON-01A 2 15 CDS-5'UTR Inter-chr q21.3 Oncogene q21.2 Seq+ 105730 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASAL1-DDX54 RASAL1 chr12 113115934 - DDX54 chr12 113159109 - Exonic hg38 UCEC TCGA-EY-A2ON-01A 1 16 Out-of-frame Intra-chr q24.13 Tumor suppressor gene q24.13 Seq+ 105731 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPRE1-POFUT1 MAPRE1 chr20 32820028 + POFUT1 chr20 32215269 + Exonic hg38 UCEC TCGA-EY-A2ON-01A 2 7 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 105732 ChimerSeq TCGA FAWG TCGA_RNA-Seq TK1-AFMID TK1 chr17 78175050 - AFMID chr17 78190970 + Exonic hg38 UCEC TCGA-EY-A2ON-01A 1 11 In-Frame Intra-chr q25.3 q25.3 105733 ChimerSeq TCGA FAWG TCGA_RNA-Seq TAOK1-CPD TAOK1 chr17 29391024 + CPD chr17 30420841 + Exonic hg38 UCEC TCGA-EY-A2OQ-01A 22 53 5'UTR-5'UTR Intra-chr q11.2 q11.2 Tumor suppressor gene Seq+ 105734 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAI1-MED9 RAI1 chr17 17724159 + MED9 chr17 17491279 + Exonic hg38 UCEC TCGA-EY-A2OQ-01A 1 47 5'UTR-CDS Intra-chr p11.2 p11.2 105735 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAD3B-HADHB ATAD3B chr1 1472089 + HADHB chr2 26263380 + Exonic hg38 UCEC TCGA-EY-A2OQ-01A 4 14 In-Frame Inter-chr p36.33 p23.3 Seq+ 105736 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF627-PRKCSH ZNF627 chr19 11597630 + PRKCSH chr19 11435645 + Exonic hg38 UCEC TCGA-EY-A2OQ-01A 1 19 5'UTR-5'UTR Intra-chr p13.2 Transcription factor p13.2 105737 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO9B-NEK8 MYO9B chr19 17075874 + NEK8 chr17 28740822 + Exonic hg38 UCEC TCGA-EY-A2OQ-01A 4 3 5'UTR-CDS Inter-chr p13.11 q11.2 Other:NEK Seq+ 105738 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFE2L1-PNPO NFE2L1 chr17 48057502 + PNPO chr17 47943306 + Exonic hg38 UCEC TCGA-EY-A2OQ-01A 1 15 In-Frame Intra-chr q21.32 Transcription factor q21.32 105739 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKS1A-PIGN ANKS1A chr6 34889599 + PIGN chr18 62045979 - Exonic hg38 UCEC TCGA-EY-A2OQ-01A 3 4 In-Frame Inter-chr p21.31 q21.33 Seq+ 105740 ChimerSeq TCGA FAWG TCGA_RNA-Seq GOSR1-TAOK1 GOSR1 chr17 30510909 + TAOK1 chr17 29467145 + Exonic hg38 UCEC TCGA-EY-A2OQ-01A 1 12 Out-of-frame Intra-chr q11.2 q11.2 105741 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE4B-SLC25A33 UBE4B chr1 10149282 + SLC25A33 chr1 9553626 + Exonic hg38 UCEC TCGA-EY-A2OQ-01A 1 8 In-Frame Intra-chr p36.22 Tumor suppressor gene p36.22 105742 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMPR1A-C10orf11 BMPR1A chr10 86900126 + C10orf11 chr10 76324401 + Exonic hg38 UCEC TCGA-EY-A3L3-01A 45 347 Out-of-frame Intra-chr q23.2 TKL:STKR Oncogene Tumor suppressor gene Seq+ 105743 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP4R1-DPP4 PPP4R1 chr18 9561980 - DPP4 chr2 161995372 - Exonic hg38 UCEC TCGA-EY-A3L3-01A 9 45 In-Frame Inter-chr p11.22 q24.2 Tumor suppressor gene Seq+ 105744 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNK-C1QTNF1 UNK chr17 75784984 + C1QTNF1 chr17 79043955 + Exonic hg38 UCEC TCGA-EY-A3L3-01A 6 38 5'UTR-5'UTR Intra-chr q25.1 q25.3 Seq+ 105745 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPLP2-DEAF1 RPLP2 chr11 812633 + DEAF1 chr11 644654 - Exonic hg38 UCEC TCGA-EY-A3L3-01A 5 17 3'UTR-5'UTR Intra-chr p15.5 Transcription factor Seq+ 105746 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAP30BP-UNK SAP30BP chr17 75671863 + UNK chr17 75809760 + Exonic hg38 UCEC TCGA-EY-A3L3-01A 2 6 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 105747 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASAP1-LMNTD1 ASAP1 chr8 130358017 - LMNTD1 chr12 25526955 - Exonic hg38 UCEC TCGA-EY-A3L3-01A 2 4 Out-of-frame Inter-chr q24.22 p12.1 Tumor suppressor gene 105748 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATF7-CALCOCO1 ATF7 chr12 53625951 - CALCOCO1 chr12 53719829 - Exonic hg38 UCEC TCGA-EY-A3L3-01A 1 7 5'UTR-CDS Intra-chr q13.13 Transcription factor q13.13 105749 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEDD9-GOLGB1 NEDD9 chr6 11213281 - GOLGB1 chr3 121669355 - Exonic hg38 UCEC TCGA-EY-A3QX-01A 108 212 In-Frame Inter-chr p24.2 q13.33 Seq+ 105750 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-PVT1 ERBB2 chr17 39717480 + PVT1 chr8 128096518 + Exonic hg38 UCEC TCGA-EY-A3QX-01A 18 131 5'UTR-5'UTR Inter-chr q12 Oncogene q24.21 Seq+ 105751 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK1-PRODH MAPK1 chr22 21867322 - PRODH chr22 18931198 - Exonic hg38 UCEC TCGA-EY-A3QX-01A 26 51 CDS-5'UTR Intra-chr q11.22 Oncogene q11.21 Tumor suppressor gene Seq+ 105752 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXK2-LONP2 FOXK2 chr17 82586200 + LONP2 chr16 48361477 + Exonic hg38 UCEC TCGA-EY-A3QX-01A 14 56 Out-of-frame Inter-chr q25.3 Transcription factor q12.1 Seq+ 105753 ChimerSeq TCGA FAWG TCGA_RNA-Seq SF1-ZSWIM5 SF1 chr11 64776498 - ZSWIM5 chr1 45088237 - Exonic hg38 UCEC TCGA-EY-A3QX-01A 13 33 In-Frame Inter-chr q13.1 p34.1 Seq+ 105754 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC9-SLC45A4 TRAPPC9 chr8 140426615 - SLC45A4 chr8 141207325 - Exonic hg38 UCEC TCGA-EY-A3QX-01A 10 37 CDS-3'UTR Intra-chr q24.3 q24.3 Seq+ 105755 ChimerSeq TCGA FAWG TCGA_RNA-Seq LAMC2-NMNAT2 LAMC2 chr1 183186431 + NMNAT2 chr1 183293793 - Exonic hg38 UCEC TCGA-EY-A3QX-01A 8 25 In-Frame Intra-chr q25.3 q25.3 Seq+ 105756 ChimerSeq TCGA FAWG TCGA_RNA-Seq SDF4-PPP1R2 SDF4 chr1 1218458 - PPP1R2 chr3 195529901 - Exonic hg38 UCEC TCGA-EY-A3QX-01A 5 35 Out-of-frame Inter-chr p36.33 q29 Seq+ 105757 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2B4-PRELP ATP2B4 chr1 203627219 + PRELP chr1 203483169 + Exonic hg38 UCEC TCGA-EY-A3QX-01A 5 17 5'UTR-5'UTR Intra-chr q32.1 q32.1 Seq+ 105758 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYTL3-SNX9 SYTL3 chr6 158713878 + SNX9 chr6 157921531 + Exonic hg38 UCEC TCGA-EY-A3QX-01A 6 5 In-Frame Intra-chr q25.3 q25.3 Seq+ 105759 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARAP1-ARRB1 ARAP1 chr11 72702905 - ARRB1 chr11 75290039 - Exonic hg38 UCEC TCGA-EY-A3QX-01A 2 13 Out-of-frame Intra-chr q13.4 q13.4 Seq+ 105760 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNS1-RNF25 TNS1 chr2 217906335 - RNF25 chr2 218668679 - Exonic hg38 UCEC TCGA-EY-A3QX-01A 4 5 5'UTR-CDS Intra-chr q35 q35 Seq+ 105761 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACAP2-UBE2J2 ACAP2 chr3 195381009 - UBE2J2 chr1 1267992 - Exonic hg38 UCEC TCGA-EY-A3QX-01A 3 8 CDS-5'UTR Inter-chr q29 p36.33 Seq+ 105762 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R1B-GRB7 PPP1R1B chr17 39635726 + GRB7 chr17 39742252 + Exonic hg38 UCEC TCGA-EY-A3QX-01A 2 2 In-Frame Intra-chr q12 Tumor suppressor gene q12 Seq+ 105763 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPOP-NDUFS5 SPOP chr17 49677933 - NDUFS5 chr1 39028723 + Exonic hg38 UCEC TCGA-EY-A4KR-01A 70 153 5'UTR-5'UTR Inter-chr q21.33 Oncogene Tumor suppressor gene p34.3 Seq+ 105764 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARID1B-EZR ARID1B chr6 156935576 + EZR chr6 158789371 - Exonic hg38 UCEC TCGA-EY-A4KR-01A 29 92 In-Frame Intra-chr q25.3 Oncogene q25.3 Seq+ 105765 ChimerSeq TCGA FAWG TCGA_RNA-Seq DOCK1-DACT3 DOCK1 chr10 127061776 + DACT3 chr19 46653075 - Exonic hg38 UCEC TCGA-EY-A4KR-01A 16 115 In-Frame Inter-chr q26.2 q13.32 Seq+ 105766 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCRN2-CBX1 SCRN2 chr17 47840670 - CBX1 chr17 48075100 - Exonic hg38 UCEC TCGA-EY-A4KR-01A 10 123 In-Frame Intra-chr q21.32 q21.32 Seq+ 105767 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF213-AKAP8L RNF213 chr17 80358479 + AKAP8L chr19 15410594 - Exonic hg38 UCEC TCGA-EY-A4KR-01A 19 85 Out-of-frame Inter-chr q25.3 Oncogene p13.12 Transcription factor Seq+ 105768 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLYR1-C16orf89 GLYR1 chr16 4811170 - C16orf89 chr16 5047964 - Exonic hg38 UCEC TCGA-EY-A4KR-01A 10 97 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 105769 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFX3-PLGRKT RFX3 chr9 3395472 - PLGRKT chr9 5361888 - Exonic hg38 UCEC TCGA-EY-A4KR-01A 16 62 In-Frame Intra-chr p24.2 Transcription factor p24.1 Seq+ 105770 ChimerSeq TCGA FAWG TCGA_RNA-Seq OLFM2-EXOSC10 OLFM2 chr19 9936304 - EXOSC10 chr1 11077651 - Exonic hg38 UCEC TCGA-EY-A4KR-01A 9 26 In-Frame Inter-chr p13.2 p36.22 Seq+ 105771 ChimerSeq TCGA FAWG TCGA_RNA-Seq VMP1-BCAS3 VMP1 chr17 59765138 + BCAS3 chr17 60924407 + Exonic hg38 UCEC TCGA-EY-A4KR-01A 8 16 In-Frame Intra-chr q23.1 q23.2 Seq+ 105772 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAPPC11-KCNN4 TRAPPC11 chr4 183668117 + KCNN4 chr19 43772135 - Exonic hg38 UCEC TCGA-EY-A4KR-01A 7 16 In-Frame Inter-chr q35.1 q13.31 Seq+ 105773 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF2P1-GOSR1 SMURF2P1 chr17 30610942 + GOSR1 chr17 30510880 + Exonic hg38 UCEC TCGA-EY-A4KR-01A 5 20 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 105774 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD27-PEPD ANKRD27 chr19 32628083 - PEPD chr19 33411749 - Exonic hg38 UCEC TCGA-EY-A4KR-01A 6 11 Out-of-frame Intra-chr q13.11 q13.11 Seq+ 105775 ChimerSeq TCGA FAWG TCGA_RNA-Seq NECTIN2-CEACAM19 NECTIN2 chr19 44846613 + CEACAM19 chr19 44672596 + Exonic hg38 UCEC TCGA-EY-A4KR-01A 1 30 In-Frame Intra-chr q13.32 q13.31 105776 ChimerSeq TCGA FAWG TCGA_RNA-Seq HIBCH-STAT1 HIBCH chr2 190294546 - STAT1 chr2 190964694 - Exonic hg38 UCEC TCGA-EY-A4KR-01A 1 21 CDS-3'UTR Intra-chr q32.2 q32.2 Tumor suppressor gene Transcription factor 105777 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGB8-ATM ITGB8 chr7 20363722 + ATM chr11 108267171 + Exonic hg38 UCEC TCGA-EY-A4KR-01A 6 1 In-Frame Inter-chr p21.1 q22.3 Atypical:PIKK Oncogene Tumor suppressor gene Seq+ 105778 ChimerSeq TCGA FAWG TCGA_RNA-Seq PABPC1-ZNF706 PABPC1 chr8 100704297 - ZNF706 chr8 101178387 - Exonic hg38 UCEC TCGA-EY-A4KR-01A 2 9 3'UTR-3'UTR Intra-chr q22.3 q22.3 Transcription factor Seq+ 105779 ChimerSeq TCGA FAWG TCGA_RNA-Seq IQGAP1-ZNF710 IQGAP1 chr15 90390873 + ZNF710 chr15 90067110 + Exonic hg38 UCEC TCGA-EY-A4KR-01A 1 12 CDS-5'UTR Intra-chr q26.1 q26.1 Transcription factor Seq+ 105780 ChimerSeq TCGA FAWG TCGA_RNA-Seq VIPAS39-ISM2 VIPAS39 chr14 77444249 - ISM2 chr14 77484919 - Exonic hg38 UCEC TCGA-EY-A4KR-01A 3 4 In-Frame Intra-chr q24.3 q24.3 Seq+ 105781 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX27-TUFT1 SNX27 chr1 151639119 + TUFT1 chr1 151562585 + Exonic hg38 UCEC TCGA-EY-A4KR-01A 1 7 In-Frame Intra-chr q21.3 q21.3 105782 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC38A10-RPTOR SLC38A10 chr17 81270918 - RPTOR chr17 80822201 + Exonic hg38 UCEC TCGA-EY-A4KR-01A 1 6 Out-of-frame Intra-chr q25.3 q25.3 105783 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUSD6-PLEKHD1 SUSD6 chr14 69658713 + PLEKHD1 chr14 69500115 + Exonic hg38 UCEC TCGA-EY-A4KR-01A 1 4 Out-of-frame Intra-chr q24.1 q24.1 105784 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACC1-NPAT MACC1 chr7 20198525 - NPAT chr11 108197420 - Exonic hg38 UCEC TCGA-EY-A4KR-01A 1 2 5'UTR-CDS Inter-chr p21.1 q22.3 105785 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACF1-HDAC5 MACF1 chr1 39258028 + HDAC5 chr17 44117704 - Exonic hg38 UCEC TCGA-EY-A4KR-01A 1 2 CDS-5'UTR Inter-chr p34.3 q21.31 Seq+ 105786 ChimerSeq TCGA FAWG TCGA_RNA-Seq RBL1-BCAS1 RBL1 chr20 37022650 - BCAS1 chr20 53944996 - Exonic hg38 UCEC TCGA-EY-A547-01A 6 21 In-Frame Intra-chr q11.23 Tumor suppressor gene q13.2 Seq+ 105787 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERBB2-NOL12 ERBB2 chr17 39728270 + NOL12 chr22 37681867 + Exonic hg38 UCEC TCGA-EY-A54A-01A 59 74 Out-of-frame Inter-chr q12 Oncogene q13.1 Seq+ 105788 ChimerSeq TCGA FAWG TCGA_RNA-Seq MRPL50-TMEM246 MRPL50 chr9 101398501 - TMEM246 chr9 101489200 - Exonic hg38 UCEC TCGA-EY-A54A-01A 8 31 CDS-5'UTR Intra-chr q31.1 q31.1 Seq+ 105789 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALT5-SPATA2 B4GALT5 chr20 49656568 - SPATA2 chr20 49908592 - Exonic hg38 UCEC TCGA-EY-A54A-01A 6 34 CDS-5'UTR Intra-chr q13.13 q13.13 Seq+ 105790 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOL12-STARD3 NOL12 chr22 37688015 + STARD3 chr17 39653481 + Exonic hg38 UCEC TCGA-EY-A54A-01A 2 33 CDS-5'UTR Inter-chr q13.1 q12 Seq+ 105791 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX46-SEC24A DDX46 chr5 134790552 + SEC24A chr5 134674615 + Exonic hg38 UCEC TCGA-EY-A54A-01A 3 15 Out-of-frame Intra-chr q31.1 q31.1 Seq+ 105792 ChimerSeq TCGA FAWG TCGA_RNA-Seq GANAB-SLC22A8 GANAB chr11 62628769 - SLC22A8 chr11 63000823 - Exonic hg38 UCEC TCGA-EY-A54A-01A 2 18 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q12.3 Seq+ 105793 ChimerSeq TCGA FAWG TCGA_RNA-Seq HENMT1-MYBPHL HENMT1 chr1 108654716 - MYBPHL chr1 109298257 - Exonic hg38 UCEC TCGA-EY-A54A-01A 2 10 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 105794 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSUN5-BAZ1B NSUN5 chr7 73307394 - BAZ1B chr7 73450994 - Exonic hg38 UCEC TCGA-EY-A54A-01A 1 10 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 105795 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPRM-ZNF595 PTPRM chr18 8069994 + ZNF595 chr4 59430 + Exonic hg38 UCEC TCGA-EY-A54A-01A 1 3 Out-of-frame Inter-chr p11.23 p16.3 Transcription factor 105796 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD1A-SRCAP SETD1A chr16 30980657 + SRCAP chr16 30733280 + Exonic hg38 UCEC TCGA-EY-A54A-01A 1 3 Out-of-frame Intra-chr p11.2 p11.2 Transcription factor 105797 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCK1-SLIRP ADCK1 chr14 77822518 + SLIRP chr14 77715772 + Exonic hg38 UCEC TCGA-EY-A54A-01A 1 2 In-Frame Intra-chr q24.3 Atypical:ABC1 q24.3 105798 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPG7-EFCAB12 SPG7 chr16 89532636 + EFCAB12 chr3 129421803 - Exonic hg38 UCEC TCGA-EY-A54A-01A 1000 1000 In-Frame Inter-chr q24.3 q21.3 105799 ChimerSeq TCGA FAWG TCGA_RNA-Seq MFHAS1-NBDY MFHAS1 chr8 8890061 - NBDY chrX 56817320 + Exonic hg38 UCEC TCGA-FI-A3PV-01A 100 325 3'UTR-3'UTR Inter-chr p23.1 p11.21 105800 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSPG2-MATN2 HSPG2 chr1 21839371 - MATN2 chr8 97978886 + Exonic hg38 UCEC TCGA-FI-A3PV-01A 24 102 In-Frame Inter-chr p36.12 q22.1 Seq+ 105801 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF213-NVL RNF213 chr17 80363314 + NVL chr1 224294411 - Exonic hg38 UCEC TCGA-FI-A3PV-01A 7 87 Out-of-frame Inter-chr q25.3 Oncogene q42.11 Seq+ 105802 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIRREL-SNUPN KIRREL chr1 158076262 + SNUPN chr15 75626371 - Exonic hg38 UCEC TCGA-FI-A3PV-01A 10 28 Out-of-frame Inter-chr q23.1 q24.2 Seq+ 105803 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR20-PPP2R5C WDR20 chr14 102195120 + PPP2R5C chr14 101856686 + Exonic hg38 UCEC TCGA-FI-A3PV-01A 5 45 Out-of-frame Intra-chr q32.31 q32.31 Tumor suppressor gene Seq+ 105804 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAN1A2-PTGFRN MAN1A2 chr1 117442325 + PTGFRN chr1 116986801 + Exonic hg38 UCEC TCGA-FI-A3PV-01A 3 16 Out-of-frame Intra-chr p12 p13.1 Seq+ 105805 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCOR-PHEX BCOR chrX 40177007 - PHEX chrX 22212904 + Exonic hg38 UCEC TCGA-FI-A3PV-01A 2 15 5'UTR-CDS Intra-chr p11.4 Oncogene p22.11 Seq+ 105806 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIB2-ACVR1B MIB2 chr1 1623945 + ACVR1B chr12 51975265 + Exonic hg38 UCEC TCGA-FI-A3PV-01A 4 7 Out-of-frame Inter-chr p36.33 q13.13 Oncogene Seq+ 105807 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRMD8-VPS51 FRMD8 chr11 65393674 + VPS51 chr11 65107187 + Exonic hg38 UCEC TCGA-FI-A3PV-01A 1 6 CDS-5'UTR Intra-chr q13.1 q13.1 105808 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIPA1L3-COLEC10 SIPA1L3 chr19 37907358 + COLEC10 chr8 119105800 + Exonic hg38 UCEC TCGA-FI-A3PV-01A 1 4 5'UTR-CDS Inter-chr q13.13 q24.12 Seq+ 105809 ChimerSeq TCGA FAWG TCGA_RNA-Seq RIT1-TARS2 RIT1 chr1 155904311 - TARS2 chr1 150504335 + Exonic hg38 UCEC TCGA-FI-A3PX-01A 22 72 In-Frame Intra-chr q22 q21.2 Seq+ 105810 ChimerSeq TCGA FAWG TCGA_RNA-Seq PUM1-NKAIN1 PUM1 chr1 30950133 - NKAIN1 chr1 31188187 - Exonic hg38 UCEC TCGA-FI-A3PX-01A 12 56 In-Frame Intra-chr p35.2 p35.2 Seq+ 105811 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP25-DZIP3 USP25 chr21 15791664 + DZIP3 chr3 108674078 + Exonic hg38 UCEC TCGA-FI-A3PX-01A 9 45 In-Frame Inter-chr q21.1 q13.13 Seq+ 105812 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPCAM-ABCG8 EPCAM chr2 47369581 + ABCG8 chr2 43844507 + Exonic hg38 UCEC TCGA-FI-A3PX-01A 3 11 Out-of-frame Intra-chr p21 p21 Seq+ 105813 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM104A-CDC42EP4 FAM104A chr17 73232086 - CDC42EP4 chr17 73286612 - Exonic hg38 UCEC TCGA-FI-A3PX-01A 3 10 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 105814 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAFF-STK16 MAFF chr22 38202212 + STK16 chr2 219245896 + Exonic hg38 UCEC TCGA-FI-A3PX-01A 1 16 5'UTR-5'UTR Inter-chr q13.1 Transcription factor q35 Seq+ 105815 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIP2C-TMEM94 DIP2C chr10 310031 - TMEM94 chr17 75471800 + Exonic hg38 UCEC TCGA-FI-A3PX-01A 4 1 CDS-5'UTR Inter-chr p15.3 q25.1 105816 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC18-GRIN2B TNRC18 chr7 5374055 - GRIN2B chr12 13438011 - Exonic hg38 UCEC TCGA-FI-A3PX-01A 2 5 CDS-3'UTR Inter-chr p22.1 p13.1 105817 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCC1-ZBTB8OS SMARCC1 chr3 47610066 - ZBTB8OS chr1 32627544 - Exonic hg38 UCEC TCGA-H5-A2HR-01A 10 86 Out-of-frame Inter-chr p21.31 Tumor suppressor gene p35.1 Seq+ 105818 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOL9-ESPN NOL9 chr1 6541830 - ESPN chr1 6457184 + Exonic hg38 UCEC TCGA-H5-A2HR-01A 2 17 Out-of-frame Intra-chr p36.31 p36.31 Seq+ 105819 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX14-SNHG5 SNX14 chr6 85593579 - SNHG5 chr6 85666147 - Exonic hg38 UCEC TCGA-H5-A2HR-01A 2 15 3'UTR-3'UTR Intra-chr q14.3 q14.3 Seq+ 105820 ChimerSeq TCGA FAWG TCGA_RNA-Seq TFB2M-SMYD3 TFB2M chr1 246556573 - SMYD3 chr1 245863886 - Exonic hg38 UCEC TCGA-H5-A2HR-01A 1 9 In-Frame Intra-chr q44 q44 Transcription factor Seq+ 105821 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2B2-TAMM41 ATP2B2 chr3 10534039 - TAMM41 chr3 11809682 - Exonic hg38 UCEC TCGA-H5-A2HR-01A 1 6 5'UTR-3'UTR Intra-chr p25.3 p25.2 105822 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKLE2-RNF180 ANKLE2 chr12 132735406 - RNF180 chr5 64217361 + Exonic hg38 UCEC TCGA-H5-A2HR-01A 2 0 Out-of-frame Inter-chr q24.33 q12.3 Tumor suppressor gene Seq+ 105823 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERI3-EIF2B3 ERI3 chr1 44352850 - EIF2B3 chr1 44926739 - Exonic hg38 UCEC TCGA-JU-AAVI-01A 13 29 In-Frame Intra-chr p34.1 p34.1 Seq+ 105824 ChimerSeq TCGA FAWG TCGA_RNA-Seq IER2-STX10 IER2 chr19 13150552 + STX10 chr19 13144816 - Exonic hg38 UCEC TCGA-KJ-A3U4-01A 7 51 5'UTR-CDS Intra-chr p13.13 p13.13 Seq+ 105825 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRGAP3-LHFPL4 SRGAP3 chr3 9248885 - LHFPL4 chr3 9506203 - Exonic hg38 UCEC TCGA-KJ-A3U4-01A 2 13 In-Frame Intra-chr p25.3 Tumor suppressor gene p25.3 Seq+ 105826 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCTD2-ARHGAP23 KCTD2 chr17 75059605 + ARHGAP23 chr17 38458102 + Exonic hg38 UCEC TCGA-KJ-A3U4-01A 3 4 CDS-3'UTR Intra-chr q25.1 q12 Seq+ 105827 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR156-FSTL1 GPR156 chr3 120243640 - FSTL1 chr3 120416027 - Exonic hg38 UCEC TCGA-KJ-A3U4-01A 1 2 Out-of-frame Intra-chr q13.33 q13.33 105828 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-ORMDL3 BCAS3 chr17 60709325 + ORMDL3 chr17 39924225 - Exonic hg38 UCEC TCGA-KJ-A3U4-01A 1 1 CDS-5'UTR Intra-chr q23.2 q21.1 105829 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPL-SELENOW HNRNPL chr19 38841613 - SELENOW chr19 47780725 + Exonic hg38 UCEC TCGA-KP-A3VZ-01A 78 264 5'UTR-CDS Intra-chr q13.33 105830 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPL-TPRX1 HNRNPL chr19 38841101 - TPRX1 chr19 47802771 - Exonic hg38 UCEC TCGA-KP-A3VZ-01A 42 236 Out-of-frame Intra-chr q13.33 Transcription factor Seq+ 105831 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAX8-IL36B PAX8 chr2 113278370 - IL36B chr2 113031155 - Exonic hg38 UCEC TCGA-KP-A3VZ-01A 17 93 In-Frame Intra-chr q14.1 Oncogene Transcription factor q14.1 Seq+ 105832 ChimerSeq TCGA FAWG TCGA_RNA-Seq EVPL-SAP30BP EVPL chr17 76021468 - SAP30BP chr17 75691394 + Exonic hg38 UCEC TCGA-KP-A3VZ-01A 26 53 CDS-5'UTR Intra-chr q25.1 q25.1 Seq+ 105833 ChimerSeq TCGA FAWG TCGA_RNA-Seq RYR1-ZNF383 RYR1 chr19 38578204 + ZNF383 chr19 37242469 + Exonic hg38 UCEC TCGA-KP-A3VZ-01A 16 90 Out-of-frame Intra-chr q13.2 q13.12 Transcription factor Seq+ 105834 ChimerSeq TCGA FAWG TCGA_RNA-Seq FIGN-STK25 FIGN chr2 163734903 - STK25 chr2 241501708 - Exonic hg38 UCEC TCGA-KP-A3VZ-01A 8 103 Out-of-frame Intra-chr q24.3 q37.3 Seq+ 105835 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLEKHG4B-MELK PLEKHG4B chr5 151599 + MELK chr9 36674834 + Exonic hg38 UCEC TCGA-KP-A3VZ-01A 7 90 In-Frame Inter-chr p15.33 p13.2 CAMK:CAMKL Seq+ 105836 ChimerSeq TCGA FAWG TCGA_RNA-Seq CREBBP-IFT140 CREBBP chr16 3810603 - IFT140 chr16 1592588 - Exonic hg38 UCEC TCGA-KP-A3VZ-01A 8 23 In-Frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Seq+ 105837 ChimerSeq TCGA FAWG TCGA_RNA-Seq C6orf62-KIAA0319 C6orf62 chr6 24716101 - KIAA0319 chr6 24596067 - Exonic hg38 UCEC TCGA-KP-A3VZ-01A 3 26 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 105838 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF174-CLUAP1 ZNF174 chr16 3401270 + CLUAP1 chr16 3512383 + Exonic hg38 UCEC TCGA-KP-A3VZ-01A 8 3 5'UTR-CDS Intra-chr p13.3 Transcription factor p13.3 Seq+ 105839 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCAM1-POU2AF1 NCAM1 chr11 112961664 + POU2AF1 chr11 111358918 - Exonic hg38 UCEC TCGA-KP-A3VZ-01A 2 21 In-Frame Intra-chr q23.2 q23.1 Transcription factor Seq+ 105840 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF180-CWC27 RNF180 chr5 64330406 + CWC27 chr5 64971703 + Exonic hg38 UCEC TCGA-KP-A3VZ-01A 2 16 In-Frame Intra-chr q12.3 Tumor suppressor gene q12.3 Seq+ 105841 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACVR2A-EPC2 ACVR2A chr2 147918592 + EPC2 chr2 148690214 + Exonic hg38 UCEC TCGA-KP-A3VZ-01A 4 6 Out-of-frame Intra-chr q22.3 Oncogene q23.1 Seq+ 105842 ChimerSeq TCGA FAWG TCGA_RNA-Seq UNK-RNF157 UNK chr17 75784984 + RNF157 chr17 76173790 - Exonic hg38 UCEC TCGA-KP-A3VZ-01A 1 12 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 105843 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLIT2-PACRGL SLIT2 chr4 20268881 + PACRGL chr4 20727285 + Exonic hg38 UCEC TCGA-KP-A3VZ-01A 2 7 Out-of-frame Intra-chr p15.31 Tumor suppressor gene p15.31 Seq+ 105844 ChimerSeq TCGA FAWG TCGA_RNA-Seq STK24-PDE1A STK24 chr13 98576745 - PDE1A chr2 182522386 - Exonic hg38 UCEC TCGA-KP-A3VZ-01A 2 6 Out-of-frame Inter-chr q32.2 q32.1 Seq+ 105845 ChimerSeq TCGA FAWG TCGA_RNA-Seq POU2AF1-BCO2 POU2AF1 chr11 111357445 - BCO2 chr11 112213724 + Exonic hg38 UCEC TCGA-KP-A3VZ-01A 1 3 In-Frame Intra-chr q23.1 Transcription factor q23.1 Seq+ 105846 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPZB-TMCO4 CAPZB chr1 19485436 - TMCO4 chr1 19694551 - Exonic hg38 UCEC TCGA-KP-A3VZ-01A 1 2 Out-of-frame Intra-chr p36.13 p36.13 Seq+ 105847 ChimerSeq TCGA FAWG TCGA_RNA-Seq HN1-RECQL5 HN1 chr17 75154342 - RECQL5 chr17 75631668 - Exonic hg38 UCEC TCGA-KP-A3W1-01A 17 96 Out-of-frame Intra-chr q25.1 Seq+ 105848 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR27-HDDC2 WDR27 chr6 169582836 - HDDC2 chr6 125220152 - Exonic hg38 UCEC TCGA-KP-A3W1-01A 3 8 3'UTR-3'UTR Intra-chr q27 q22.31 Seq+ 105849 ChimerSeq TCGA FAWG TCGA_RNA-Seq BAZ1B-BCL7B BAZ1B chr7 73465439 - BCL7B chr7 73543644 - Exonic hg38 UCEC TCGA-KP-A3W1-01A 2 1 Out-of-frame Intra-chr q11.23 q11.23 Seq+ 105850 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMIP-DOK4 CMIP chr16 81445541 + DOK4 chr16 57479685 - Exonic hg38 UCEC TCGA-KP-A3W1-01A 1 2 CDS-5'UTR Intra-chr q23.2 q21 105851 ChimerSeq TCGA FAWG TCGA_RNA-Seq APOL2-SCUBE1 APOL2 chr22 36231340 - SCUBE1 chr22 43270589 - Exonic hg38 UCEC TCGA-KP-A3W1-01A 1000 1000 Out-of-frame Intra-chr q12.3 q13.2 105852 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPCS3-VEGFC SPCS3 chr4 176320219 + VEGFC chr4 176729746 - Exonic hg38 UCEC TCGA-KP-A3W3-01A 2 2 Out-of-frame Intra-chr q34.2 q34.3 Seq+ 105853 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERGIC1-MIEN1 ERGIC1 chr5 172912956 + MIEN1 chr17 39730232 - Exonic hg38 UCEC TCGA-KP-A3W4-01A 23 30 Out-of-frame Inter-chr q35.1 q12 Seq+ 105854 ChimerSeq TCGA FAWG TCGA_RNA-Seq UPF3A-CDC16 UPF3A chr13 114282943 + CDC16 chr13 114242121 + Exonic hg38 UCEC TCGA-KP-A3W4-01A 6 50 Out-of-frame Intra-chr q34 q34 Seq+ 105855 ChimerSeq TCGA FAWG TCGA_RNA-Seq MOB3C-EFCAB14 MOB3C chr1 46616711 - EFCAB14 chr1 46716443 - Exonic hg38 UCEC TCGA-KP-A3W4-01A 5 23 5'UTR-CDS Intra-chr p33 p33 Seq+ 105856 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKNK1-EFCAB14 MKNK1 chr1 46616711 - EFCAB14 chr1 46716443 - Exonic hg38 UCEC TCGA-KP-A3W4-01A 5 20 5'UTR-CDS Intra-chr p33 p33 Seq+ 105857 ChimerSeq TCGA FAWG TCGA_RNA-Seq CACUL1-IL1RN CACUL1 chr10 118754396 - IL1RN chr2 113127689 + Exonic hg38 UCEC TCGA-KP-A3W4-01A 2 9 In-Frame Inter-chr q26.11 q14.1 Seq+ 105858 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2S2-SKAP1 EIF2S2 chr20 34103462 - SKAP1 chr17 48189500 - Exonic hg38 UCEC TCGA-KP-A3W4-01A 2 4 Out-of-frame Inter-chr q11.22 q21.32 Seq+ 105859 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF207-RHOT1 ZNF207 chr17 32369782 + RHOT1 chr17 32253085 + Exonic hg38 UCEC TCGA-KP-A3W4-01A 1 6 Out-of-frame Intra-chr q11.2 Transcription factor q11.2 Seq+ 105860 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMK2D-STAC3 CAMK2D chr4 113465529 - STAC3 chr12 57244965 - Exonic hg38 UCEC TCGA-KP-A3W4-01A 1 3 Out-of-frame Inter-chr q26 q13.3 Seq+ 105861 ChimerSeq TCGA FAWG TCGA_RNA-Seq COG4-MELTF COG4 chr16 70500958 - MELTF chr3 197026759 - Exonic hg38 UCEC TCGA-PG-A5BC-01A 3 28 Out-of-frame Inter-chr q22.1 q29 105862 ChimerSeq TCGA FAWG TCGA_RNA-Seq POC1A-TWF2 POC1A chr3 52138169 - TWF2 chr3 52232117 - Exonic hg38 UCEC TCGA-PG-A5BC-01A 3 20 Out-of-frame Intra-chr p21.2 p21.2 Seq+ 105863 ChimerSeq TCGA FAWG TCGA_RNA-Seq RERE-SLC2A7 RERE chr1 8655973 - SLC2A7 chr1 9019333 - Exonic hg38 UCEC TCGA-PG-A5BC-01A 3 19 Out-of-frame Intra-chr p36.23 p36.23 Seq+ 105864 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDX46-CDC25C DDX46 chr5 134758955 + CDC25C chr5 138331214 - Exonic hg38 UCEC TCGA-PG-A5BC-01A 2 19 In-Frame Intra-chr q31.1 q31.2 Seq+ 105865 ChimerSeq TCGA FAWG TCGA_RNA-Seq GON4L-RIT1 GON4L chr1 155857147 - RIT1 chr1 155904804 - Exonic hg38 UCEC TCGA-PG-A5BC-01A 3 8 5'UTR-CDS Intra-chr q22 q22 Seq+ 105866 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK4-ACP7 PAK4 chr19 39125919 + ACP7 chr19 39085092 + Exonic hg38 UCEC TCGA-PG-A5BC-01A 2 11 5'UTR-5'UTR Intra-chr q13.2 STE:STE20 q13.2 105867 ChimerSeq TCGA FAWG TCGA_RNA-Seq SRC-MANBAL SRC chr20 37365277 + MANBAL chr20 37316308 + Exonic hg38 UCEC TCGA-PG-A5BC-01A 1 1 5'UTR-CDS Intra-chr q11.23 TK:Src Oncogene q11.23 Seq+ 105868 ChimerSeq TCGA FAWG TCGA_RNA-Seq TGOLN2-IMMT TGOLN2 chr2 85324915 - IMMT chr2 86144881 - Exonic hg38 UCEC TCGA-PG-A7D5-01A 16 35 Out-of-frame Intra-chr p11.2 p11.2 Seq+ 105869 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPDZ-ITPK1 MPDZ chr9 13247635 - ITPK1 chr14 92941904 - Exonic hg38 UCEC TCGA-PG-A7D5-01A 6 28 CDS-5'UTR Inter-chr p23 Seq+ 105870 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPX2-MECOM TPX2 chr20 31742647 + MECOM chr3 169149755 - Exonic hg38 UCEC TCGA-PG-A7D5-01A 7 22 5'UTR-5'UTR Inter-chr q11.21 q26.2 Transcription factor Seq+ 105871 ChimerSeq TCGA FAWG TCGA_RNA-Seq SORT1-PSMA5 SORT1 chr1 109367408 - PSMA5 chr1 109402090 - Exonic hg38 UCEC TCGA-PG-A7D5-01A 7 20 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 105872 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDON-DCPS CDON chr11 125978304 - DCPS chr11 126345347 + Exonic hg38 UCEC TCGA-PG-A7D5-01A 5 23 Out-of-frame Intra-chr q24.2 q24.2 Seq+ 105873 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCAS3-VMP1 BCAS3 chr17 61040892 + VMP1 chr17 59817712 + Exonic hg38 UCEC TCGA-PG-A7D5-01A 3 30 Out-of-frame Intra-chr q23.2 q23.1 Seq+ 105874 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRR14L-CC2D1A PRR14L chr22 31738387 - CC2D1A chr19 13923333 + Exonic hg38 UCEC TCGA-PG-A7D5-01A 3 12 In-Frame Inter-chr q12.2 p13.12 Transcription factor Seq+ 105875 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCY9-CLUAP1 ADCY9 chr16 4113750 - CLUAP1 chr16 3519903 + Exonic hg38 UCEC TCGA-PG-A7D5-01A 4 6 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 105876 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF3B-REM1 KIF3B chr20 32277765 + REM1 chr20 31482287 + Exonic hg38 UCEC TCGA-PG-A7D5-01A 4 6 5'UTR-CDS Intra-chr q11.21 q11.21 Seq+ 105877 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASNA1-DHPS ASNA1 chr19 12738658 + DHPS chr19 12680325 - Exonic hg38 UCEC TCGA-PG-A7D5-01A 2 5 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 105878 ChimerSeq TCGA FAWG TCGA_RNA-Seq RCL1-INSL6 RCL1 chr9 4849550 + INSL6 chr9 5164265 - Exonic hg38 UCEC TCGA-PG-A7D5-01A 1 6 Out-of-frame Intra-chr p24.1 p24.1 105879 ChimerSeq TCGA FAWG TCGA_RNA-Seq PLCB4-MACROD2 PLCB4 chr20 9307898 + MACROD2 chr20 15862745 + Exonic hg38 UCEC TCGA-PG-A7D5-01A 1 4 In-Frame Intra-chr p12.3 p12.1 Seq+ 105880 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD109-SNU13 CD109 chr6 73697572 + SNU13 chr22 41680364 - Exonic hg38 UCEC TCGA-PG-A7D5-01A 1 3 Out-of-frame Inter-chr q13 q13.2 105881 ChimerSeq TCGA FAWG TCGA_RNA-Seq SH3GLB2-CACNA1A SH3GLB2 chr9 129028092 - CACNA1A chr19 13303884 - Exonic hg38 UCEC TCGA-PG-A7D5-01A 1 2 In-Frame Inter-chr q34.11 p13.13 Seq+ 105882 ChimerSeq TCGA FAWG TCGA_RNA-Seq MICALL1-SHC1 MICALL1 chr22 37906568 + SHC1 chr1 154966517 - Exonic hg38 UCEC TCGA-PG-A914-01A 34 114 In-Frame Inter-chr q13.1 q21.3 Seq+ 105883 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM2-FAM71F1 TRIM2 chr4 153296036 + FAM71F1 chr7 128709085 + Exonic hg38 UCEC TCGA-PG-A914-01A 15 54 CDS-5'UTR Inter-chr q31.3 q32.1 Seq+ 105884 ChimerSeq TCGA FAWG TCGA_RNA-Seq IP6K2-PRKAR2A IP6K2 chr3 48717157 - PRKAR2A chr3 48756444 - Exonic hg38 UCEC TCGA-PG-A914-01A 12 45 5'UTR-CDS Intra-chr p21.31 p21.31 Seq+ 105885 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMZ2-KDM1B AMZ2 chr17 68251178 + KDM1B chr6 18205537 + Exonic hg38 UCEC TCGA-PG-A914-01A 9 53 In-Frame Inter-chr q24.2 p22.3 Seq+ 105886 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPA2B1-SKAP2 HNRNPA2B1 chr7 26192495 - SKAP2 chr7 26854890 - Exonic hg38 UCEC TCGA-PG-A914-01A 15 27 3'UTR-CDS Intra-chr p15.2 p15.2 Seq+ 105887 ChimerSeq TCGA FAWG TCGA_RNA-Seq PICK1-MYPOP PICK1 chr22 38059345 + MYPOP chr19 45891323 - Exonic hg38 UCEC TCGA-PG-A914-01A 11 41 Out-of-frame Inter-chr q13.1 q13.32 Transcription factor Seq+ 105888 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIPA1L3-RAB8A SIPA1L3 chr19 37907358 + RAB8A chr19 16125470 + Exonic hg38 UCEC TCGA-PG-A914-01A 7 44 5'UTR-CDS Intra-chr q13.13 p13.11 Seq+ 105889 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF587-AURKC ZNF587 chr19 57850071 + AURKC chr19 57231742 + Exonic hg38 UCEC TCGA-PG-A914-01A 13 14 Out-of-frame Intra-chr q13.43 Transcription factor q13.43 Oncogene Seq+ 105890 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP4K4-REV1 MAP4K4 chr2 101856138 + REV1 chr2 99439310 - Exonic hg38 UCEC TCGA-PG-A914-01A 11 20 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 105891 ChimerSeq TCGA FAWG TCGA_RNA-Seq P2RX5-MAP3K13 P2RX5 chr17 3688012 - MAP3K13 chr3 185328624 + Exonic hg38 UCEC TCGA-PG-A914-01A 5 36 CDS-5'UTR Inter-chr p13.2 q27.2 Seq+ 105892 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTERF2-CRY1 MTERF2 chr12 106985115 - CRY1 chr12 107022192 - Exonic hg38 UCEC TCGA-PG-A914-01A 7 26 5'UTR-CDS Intra-chr q23.3 Transcription factor q23.3 105893 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCALD-UBR5 NCALD chr8 101719252 - UBR5 chr8 102254514 - Exonic hg38 UCEC TCGA-PG-A914-01A 5 31 In-Frame Intra-chr q22.3 q22.3 Oncogene Seq+ 105894 ChimerSeq TCGA FAWG TCGA_RNA-Seq OXSR1-DLEC1 OXSR1 chr3 38193418 + DLEC1 chr3 38111677 + Exonic hg38 UCEC TCGA-PG-A914-01A 5 29 Out-of-frame Intra-chr p22.2 p22.2 Tumor suppressor gene Seq+ 105895 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D10A-ANK1 TBC1D10A chr22 30304531 - ANK1 chr8 41734069 - Exonic hg38 UCEC TCGA-PG-A914-01A 6 24 In-Frame Inter-chr q12.2 p11.21 Seq+ 105896 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO1E-TMCO3 MYO1E chr15 59372498 - TMCO3 chr13 113520616 + Exonic hg38 UCEC TCGA-PG-A914-01A 6 19 Out-of-frame Inter-chr q22.2 q34 Seq+ 105897 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBLIM1-EFHD2 FBLIM1 chr1 15777287 + EFHD2 chr1 15430096 + Exonic hg38 UCEC TCGA-PG-A914-01A 5 22 CDS-3'UTR Intra-chr p36.21 p36.21 Seq+ 105898 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP2A2-NLRC5 AP2A2 chr11 959505 + NLRC5 chr16 57033604 + Exonic hg38 UCEC TCGA-PG-A914-01A 7 9 3'UTR-CDS Inter-chr p15.5 q13 Seq+ 105899 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZC3H4-APOBEC3A ZC3H4 chr19 47110895 - APOBEC3A chr22 38957588 + Exonic hg38 UCEC TCGA-PG-A914-01A 1 29 Out-of-frame Inter-chr q13.32 Seq+ 105900 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNNA1-WNT8A CTNNA1 chr5 138887642 + WNT8A chr5 138084498 + Exonic hg38 UCEC TCGA-PG-A914-01A 5 12 In-Frame Intra-chr q31.2 Oncogene q31.2 Seq+ 105901 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPHOSPH9-CCDC92 MPHOSPH9 chr12 123198247 - CCDC92 chr12 123937830 - Exonic hg38 UCEC TCGA-PG-A914-01A 5 11 CDS-5'UTR Intra-chr q24.31 Seq+ 105902 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2AK1-ANKS1B EIF2AK1 chr7 6037424 - ANKS1B chr12 99246864 - Exonic hg38 UCEC TCGA-PG-A914-01A 4 11 Out-of-frame Inter-chr p22.1 q23.1 105903 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPECC1-HM13 SPECC1 chr17 20232405 + HM13 chr20 31527484 + Exonic hg38 UCEC TCGA-PG-A914-01A 4 11 Out-of-frame Inter-chr p11.2 q11.21 Seq+ 105904 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMURF2-GNA13 SMURF2 chr17 64661829 - GNA13 chr17 65018303 - Exonic hg38 UCEC TCGA-PG-A914-01A 5 5 Out-of-frame Intra-chr q24.1 q24.1 Seq+ 105905 ChimerSeq TCGA FAWG TCGA_RNA-Seq BMP2K-ANXA3 BMP2K chr4 78776721 + ANXA3 chr4 78573180 + Exonic hg38 UCEC TCGA-PG-A914-01A 4 6 Out-of-frame Intra-chr q21.21 q21.21 Seq+ 105906 ChimerSeq TCGA FAWG TCGA_RNA-Seq DMPK-RCN3 DMPK chr19 45779264 - RCN3 chr19 49534193 + Exonic hg38 UCEC TCGA-PG-A914-01A 3 9 Out-of-frame Intra-chr q13.32 q13.33 Seq+ 105907 ChimerSeq TCGA FAWG TCGA_RNA-Seq BSCL2-C14orf159 BSCL2 chr11 62702468 - C14orf159 chr14 91196375 + Exonic hg38 UCEC TCGA-PG-A914-01A 3 8 Out-of-frame Inter-chr q12.3 q32.11 Seq+ 105908 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACROD2-FLRT3 MACROD2 chr20 15933338 + FLRT3 chr20 14327558 - Exonic hg38 UCEC TCGA-PG-A914-01A 2 9 CDS-5'UTR Intra-chr p12.1 p12.1 105909 ChimerSeq TCGA FAWG TCGA_RNA-Seq LETM1-NELFA LETM1 chr4 1822181 - NELFA chr4 2023536 - Exonic hg38 UCEC TCGA-PG-A914-01A 1 8 CDS-5'UTR Intra-chr p16.3 p16.3 105910 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUMA1-TBC1D10A NUMA1 chr11 72069842 - TBC1D10A chr22 30293805 - Exonic hg38 UCEC TCGA-PG-A914-01A 1 8 5'UTR-CDS Inter-chr q13.4 Oncogene q12.2 105911 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNFRSF13C-SREBF2 TNFRSF13C chr22 41926101 - SREBF2 chr22 41893117 + Exonic hg38 UCEC TCGA-PG-A914-01A 1 5 Out-of-frame Intra-chr q13.2 q13.2 Transcription factor 105912 ChimerSeq TCGA FAWG TCGA_RNA-Seq BBOF1-DNAL1 BBOF1 chr14 74034171 + DNAL1 chr14 73671542 + Exonic hg38 UCEC TCGA-PG-A914-01A 1 4 Out-of-frame Intra-chr q24.3 q24.3 105913 ChimerSeq TCGA FAWG TCGA_RNA-Seq NR2F6-UNC13A NR2F6 chr19 17235499 - UNC13A chr19 17658269 - Exonic hg38 UCEC TCGA-PG-A914-01A 1 4 In-Frame Intra-chr p13.11 Transcription factor p13.11 105914 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANKRD33B-MAML1 ANKRD33B chr5 10564833 + MAML1 chr5 179765326 + Exonic hg38 UCEC TCGA-PG-A914-01A 1 2 CDS-3'UTR Intra-chr p15.2 Seq+ 105915 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K13-P2RX5 MAP3K13 chr3 185363368 + P2RX5 chr17 3673877 - Exonic hg38 UCEC TCGA-PG-A914-01A 1 2 5'UTR-CDS Inter-chr q27.2 p13.2 Seq+ 105916 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBP2-CHD1L OSBP2 chr22 30741369 + CHD1L chr1 147252623 + Exonic hg38 UCEC TCGA-PG-A914-01A 1 2 In-Frame Inter-chr q12.2 q21.1 105917 ChimerSeq TCGA FAWG TCGA_RNA-Seq VILL-ITGA9 VILL chr3 37993972 + ITGA9 chr3 37777392 + Exonic hg38 UCEC TCGA-PG-A914-01A 1 2 In-Frame Intra-chr p22.2 p22.2 Oncogene 105918 ChimerSeq TCGA FAWG TCGA_RNA-Seq URI1-FOXA3 URI1 chr19 29986417 + FOXA3 chr19 45872075 + Exonic hg38 UCEC TCGA-PG-A915-01A 128 478 Out-of-frame Intra-chr q12 q13.32 Transcription factor Seq+ 105919 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDON-NF2 CDON chr11 125978304 - NF2 chr22 29694752 + Exonic hg38 UCEC TCGA-PG-A915-01A 48 169 Out-of-frame Inter-chr q24.2 q12.2 Oncogene Tumor suppressor gene Seq+ 105920 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYMPK-DYRK1B SYMPK chr19 45863058 - DYRK1B chr19 39831968 - Exonic hg38 UCEC TCGA-PG-A915-01A 20 53 5'UTR-5'UTR Intra-chr q13.32 CMGC:DYRK Seq+ 105921 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDT-GHRL DDT chr22 23973768 - GHRL chr3 10286812 - Exonic hg38 UCEC TCGA-PG-A915-01A 21 37 5'UTR-CDS Inter-chr p25.3 Seq+ 105922 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASXL2-DENND2A ASXL2 chr2 25878166 - DENND2A chr7 140602542 - Exonic hg38 UCEC TCGA-PG-A915-01A 11 43 CDS-5'UTR Inter-chr p23.3 q34 Seq+ 105923 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDT-SEC13 DDT chr22 23973768 - SEC13 chr3 10301374 - Exonic hg38 UCEC TCGA-PG-A915-01A 10 47 5'UTR-CDS Inter-chr p25.3 Seq+ 105924 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF709-ELL ZNF709 chr19 12484655 - ELL chr19 18446814 - Exonic hg38 UCEC TCGA-PG-A915-01A 12 32 Out-of-frame Intra-chr p13.2 Transcription factor p13.11 Seq+ 105925 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUPT5H-C19orf57 SUPT5H chr19 39445965 + C19orf57 chr19 13904913 - Exonic hg38 UCEC TCGA-PG-A915-01A 2 36 In-Frame Intra-chr q13.2 p13.12 Seq+ 105926 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUPT5H-MED29 SUPT5H chr19 39445965 + MED29 chr19 39397457 + Exonic hg38 UCEC TCGA-PG-A915-01A 7 14 In-Frame Intra-chr q13.2 q13.2 Seq+ 105927 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D10A-TFAP2B TBC1D10A chr22 30304531 - TFAP2B chr6 50845701 + Exonic hg38 UCEC TCGA-PG-A915-01A 5 19 CDS-3'UTR Inter-chr q12.2 p12.3 Transcription factor Seq+ 105928 ChimerSeq TCGA FAWG TCGA_RNA-Seq SYMPK-RPRD2 SYMPK chr19 45863058 - RPRD2 chr1 150417596 + Exonic hg38 UCEC TCGA-PG-A915-01A 5 15 5'UTR-CDS Inter-chr q13.32 q21.2 Seq+ 105929 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC157-COL21A1 CCDC157 chr22 30362114 + COL21A1 chr6 56077573 - Exonic hg38 UCEC TCGA-PG-A915-01A 4 17 5'UTR-5'UTR Inter-chr q12.2 p12.1 Seq+ 105930 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDTL-GHRL DDTL chr22 23967561 + GHRL chr3 10286812 - Exonic hg38 UCEC TCGA-PG-A915-01A 4 17 3'UTR-CDS Inter-chr p25.3 Seq+ 105931 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA3-MLLT6 NCOA3 chr20 47502019 + MLLT6 chr17 38709173 + Exonic hg38 UCEC TCGA-PG-A915-01A 3 19 5'UTR-3'UTR Inter-chr q13.12 Transcription factor q12 Seq+ 105932 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A14-BCORL1 SLC25A14 chrX 130350731 + BCORL1 chrX 130050717 + Exonic hg38 UCEC TCGA-PG-A915-01A 3 15 Out-of-frame Intra-chr q26.1 q26.1 Tumor suppressor gene Seq+ 105933 ChimerSeq TCGA FAWG TCGA_RNA-Seq DDTL-SEC13 DDTL chr22 23967561 + SEC13 chr3 10301374 - Exonic hg38 UCEC TCGA-PG-A915-01A 2 12 3'UTR-CDS Inter-chr p25.3 Seq+ 105934 ChimerSeq TCGA FAWG TCGA_RNA-Seq CC2D1A-ST3GAL4 CC2D1A chr19 13929660 + ST3GAL4 chr11 126406096 + Exonic hg38 UCEC TCGA-PG-A915-01A 1 9 Out-of-frame Inter-chr p13.12 Transcription factor q24.2 105935 ChimerSeq TCGA FAWG TCGA_RNA-Seq MUT-CCDC130 MUT chr6 49440206 - CCDC130 chr19 13751608 + Exonic hg38 UCEC TCGA-PG-A915-01A 2 5 Out-of-frame Inter-chr p12.3 p13.13 Seq+ 105936 ChimerSeq TCGA FAWG TCGA_RNA-Seq EFHC1-IL17A EFHC1 chr6 52479787 + IL17A chr6 52187603 + Exonic hg38 UCEC TCGA-PG-A915-01A 2 3 Out-of-frame Intra-chr p12.2 p12.2 Tumor suppressor gene Seq+ 105937 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFX1-SPINK4 NFX1 chr9 33344188 + SPINK4 chr9 33245112 + Exonic hg38 UCEC TCGA-PG-A915-01A 1 4 In-Frame Intra-chr p13.3 Transcription factor p13.3 Seq+ 105938 ChimerSeq TCGA FAWG TCGA_RNA-Seq CC2D1A-MRI1 CC2D1A chr19 13912593 + MRI1 chr19 13772121 + Exonic hg38 UCEC TCGA-PG-A915-01A 1 3 Out-of-frame Intra-chr p13.12 Transcription factor p13.13 105939 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNHG16-RRP1 SNHG16 chr17 76557857 + RRP1 chr21 43802274 + Exonic hg38 UCEC TCGA-QF-A5YT-01A 1 1 5'UTR-CDS Inter-chr q25.1 q22.3 105940 ChimerSeq TCGA FAWG TCGA_RNA-Seq GAGE2E-GLOD5 GAGE2E chrX 49345922 + GLOD5 chrX 48773310 + Exonic hg38 UCEC TCGA-QS-A8F1-01A 10 12 3'UTR-CDS Intra-chr p11.23 p11.23 105941 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGHMBP2-GPR137 IGHMBP2 chr11 68911603 + GPR137 chr11 64288340 + Exonic hg38 UCEC TCGA-SL-A6J9-01A 4 18 In-Frame Intra-chr q13.3 q13.1 Seq+ 105942 ChimerSeq TCGA FAWG TCGA_RNA-Seq HID1-HN1 HID1 chr17 74958141 - HN1 chr17 75136250 - Exonic hg38 UCEC TCGA-SL-A6J9-01A 2 13 Out-of-frame Intra-chr q25.1 Seq+ 105943 ChimerSeq TCGA FAWG TCGA_RNA-Seq COG4-VAC14 COG4 chr16 70490330 - VAC14 chr16 70772172 - Exonic hg38 UCEC TCGA-SL-A6J9-01A 3 7 Out-of-frame Intra-chr q22.1 q22.2 Seq+ 105944 ChimerSeq TCGA FAWG TCGA_RNA-Seq DICER1-HSD17B4 DICER1 chr14 95157230 - HSD17B4 chr5 119536423 + Exonic hg38 UCEC TCGA-SL-A6JA-01A 1 1 5'UTR-CDS Inter-chr q32.13 Oncogene Tumor suppressor gene q23.1 105945 ChimerSeq TCGA FAWG TCGA_RNA-Seq EMP3-CKM EMP3 chr19 48321977 + CKM chr19 45315597 - Exonic hg38 UCS TCGA-N5-A4R8-01A 13 81 5'UTR-CDS Intra-chr q13.33 q13.32 Seq+ 105946 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF114-ETHE1 ZNF114 chr19 48271828 + ETHE1 chr19 43511566 - Exonic hg38 UCS TCGA-N5-A4R8-01A 11 49 5'UTR-CDS Intra-chr q13.33 Transcription factor q13.31 Seq+ 105947 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDHB-RARB LDHB chr12 21637071 - RARB chr3 25596420 + Exonic hg38 UCS TCGA-N5-A4R8-01A 1 69 Out-of-frame Inter-chr p12.1 p24.2 Tumor suppressor gene Transcription factor 105948 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP2C1-NDUFB4 ATP2C1 chr3 130894775 + NDUFB4 chr3 120601111 + Exonic hg38 UCS TCGA-N5-A4R8-01A 5 11 In-Frame Intra-chr q22.1 q13.33 Seq+ 105949 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZSWIM4-CCDC130 ZSWIM4 chr19 13819492 + CCDC130 chr19 13756197 + Exonic hg38 UCS TCGA-N5-A4R8-01A 4 12 Out-of-frame Intra-chr p13.13 p13.13 Seq+ 105950 ChimerSeq TCGA FAWG TCGA_RNA-Seq TUSC3-HOOK3 TUSC3 chr8 15540568 + HOOK3 chr8 42964311 + Exonic hg38 UCS TCGA-N5-A4R8-01A 1 16 In-Frame Intra-chr p22 p11.21 Oncogene Seq+ 105951 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP160-RBM6 NUP160 chr11 47847848 - RBM6 chr3 50077008 + Exonic hg38 UCS TCGA-N5-A4RA-01A 28 120 5'UTR-5'UTR Inter-chr p11.2 p21.31 Tumor suppressor gene Seq+ 105952 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF13-TM4SF4 RNF13 chr3 149872154 + TM4SF4 chr3 149487619 + Exonic hg38 UCS TCGA-N5-A4RA-01A 2 57 In-Frame Intra-chr q25.1 q25.1 Seq+ 105953 ChimerSeq TCGA FAWG TCGA_RNA-Seq BRD4-GNAT1 BRD4 chr19 15332290 - GNAT1 chr3 50193133 + Exonic hg38 UCS TCGA-N5-A4RA-01A 11 5 5'UTR-CDS Inter-chr p13.12 Atypical:BRD p21.31 Tumor suppressor gene Seq+ 105954 ChimerSeq TCGA FAWG TCGA_RNA-Seq NSD2-NUP210L NSD2 chr4 1901251 + NUP210L chr1 154012370 - Exonic hg38 UCS TCGA-N5-A4RA-01A 1 45 In-Frame Inter-chr p16.3 q21.3 105955 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2L3-APOL1 UBE2L3 chr22 21611043 + APOL1 chr22 36261596 + Exonic hg38 UCS TCGA-N5-A4RA-01A 5 29 In-Frame Intra-chr q11.21 q12.3 Seq+ 105956 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLMAP-CYP11A1 SLMAP chr3 57757849 + CYP11A1 chr15 74348055 - Exonic hg38 UCS TCGA-N5-A4RA-01A 6 9 Out-of-frame Inter-chr p14.3 q24.1 Seq+ 105957 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCHSD2-CDC42EP2 FCHSD2 chr11 73140031 - CDC42EP2 chr11 65320544 + Exonic hg38 UCS TCGA-N5-A4RA-01A 3 20 CDS-5'UTR Intra-chr q13.4 q13.1 Seq+ 105958 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNPTG-RAB40C GNPTG chr16 1352306 + RAB40C chr16 625432 + Exonic hg38 UCS TCGA-N5-A4RA-01A 4 14 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 105959 ChimerSeq TCGA FAWG TCGA_RNA-Seq UQCC1-SHISA4 UQCC1 chr20 35411940 - SHISA4 chr1 201889445 + Exonic hg38 UCS TCGA-N5-A4RA-01A 7 2 Out-of-frame Inter-chr q11.22 q32.1 Seq+ 105960 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP210-MAST1 NUP210 chr3 13377456 - MAST1 chr19 12851934 + Exonic hg38 UCS TCGA-N5-A4RA-01A 4 10 In-Frame Inter-chr p25.1 p13.13 AGC:MAST Seq+ 105961 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP5G1-KPNB1 ATP5G1 chr17 48895334 + KPNB1 chr17 47676409 + Exonic hg38 UCS TCGA-N5-A4RA-01A 2 16 Out-of-frame Intra-chr q21.32 q21.32 Seq+ 105962 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLIT3-SDCBP SLIT3 chr5 168748302 - SDCBP chr8 58581686 + Exonic hg38 UCS TCGA-N5-A4RA-01A 3 9 In-Frame Inter-chr q35.1 q12.1 Seq+ 105963 ChimerSeq TCGA FAWG TCGA_RNA-Seq EDF1-ASPSCR1 EDF1 chr9 136862906 - ASPSCR1 chr17 82016476 + Exonic hg38 UCS TCGA-N5-A4RA-01A 2 1 Out-of-frame Inter-chr q34.3 q25.3 Seq+ 105964 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT9-MGAT5B SEPT9 chr17 77402703 + MGAT5B chr17 76872851 + Exonic hg38 UCS TCGA-N5-A4RA-01A 1 3 Out-of-frame Intra-chr q25.2 Seq+ 105965 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDK16-TIMP1 CDK16 chrX 47219105 + TIMP1 chrX 47585205 + Exonic hg38 UCS TCGA-N5-A4RD-01A 148 358 5'UTR-CDS Intra-chr p11.3 p11.3 Seq+ 105966 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPX2-DEFB118 TPX2 chr20 31771682 + DEFB118 chr20 31372857 + Exonic hg38 UCS TCGA-N5-A4RD-01A 15 122 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 105967 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMG5-MEF2D SMG5 chr1 156259005 - MEF2D chr1 156469020 - Exonic hg38 UCS TCGA-N5-A4RD-01A 6 20 Out-of-frame Intra-chr q22 q22 Transcription factor Seq+ 105968 ChimerSeq TCGA FAWG TCGA_RNA-Seq RTN3-FLJ12825 RTN3 chr11 63721032 + FLJ12825 chr12 54118604 + Exonic hg38 UCS TCGA-N5-A4RD-01A 2 23 CDS-5'UTR Inter-chr q13.1 q13.13 105969 ChimerSeq TCGA FAWG TCGA_RNA-Seq PACS2-DSG2 PACS2 chr14 105352467 + DSG2 chr18 31524703 + Exonic hg38 UCS TCGA-N5-A4RD-01A 2 22 In-Frame Inter-chr q32.33 q12.1 Seq+ 105970 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBXN1-WDR74 UBXN1 chr11 62677518 - WDR74 chr11 62839867 - Exonic hg38 UCS TCGA-N5-A4RD-01A 2 12 CDS-5'UTR Intra-chr q12.3 q12.3 Seq+ 105971 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUMB-DNM2 NUMB chr14 73355626 - DNM2 chr19 10782960 + Exonic hg38 UCS TCGA-N5-A4RD-01A 2 9 Out-of-frame Inter-chr q24.3 Tumor suppressor gene p13.2 Seq+ 105972 ChimerSeq TCGA FAWG TCGA_RNA-Seq SIK3-SRSF9 SIK3 chr11 117098143 - SRSF9 chr12 120465787 - Exonic hg38 UCS TCGA-N5-A4RD-01A 2 7 Out-of-frame Inter-chr q23.3 q24.31 Seq+ 105973 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPIN1-GREB1 LPIN1 chr2 11713812 + GREB1 chr2 11576353 + Exonic hg38 UCS TCGA-N5-A4RD-01A 1 2 Out-of-frame Intra-chr p25.1 p25.1 105974 ChimerSeq TCGA FAWG TCGA_RNA-Seq RMND1-SYNE1 RMND1 chr6 151417279 - SYNE1 chr6 152310873 - Exonic hg38 UCS TCGA-N5-A4RD-01A 1 2 In-Frame Intra-chr q25.1 q25.2 Oncogene Seq+ 105975 ChimerSeq TCGA FAWG TCGA_RNA-Seq LPP-ZNRF1 LPP chr3 188225527 + ZNRF1 chr16 75093572 + Exonic hg38 UCS TCGA-N5-A4RF-01A 12 98 5'UTR-CDS Inter-chr q27.3 Oncogene q23.1 Seq+ 105976 ChimerSeq TCGA FAWG TCGA_RNA-Seq THAP12-TIMP3 THAP12 chr11 76360956 - TIMP3 chr22 32849452 + Exonic hg38 UCS TCGA-N5-A4RJ-01A 8 9 Out-of-frame Inter-chr q13.5 Transcription factor q12.3 Oncogene Tumor suppressor gene 105977 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBASH3A-SFTA2 UBASH3A chr21 42437580 + SFTA2 chr6 30931795 - Exonic hg38 UCS TCGA-N5-A4RJ-01A 2 26 CDS-5'UTR Inter-chr q22.3 Seq+ 105978 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGAT1-UBASH3A DGAT1 chr8 144326437 - UBASH3A chr21 42437488 + Exonic hg38 UCS TCGA-N5-A4RJ-01A 1 5 5'UTR-CDS Inter-chr q24.3 q22.3 Seq+ 105979 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPS15-CCT4 EPS15 chr1 51402435 - CCT4 chr2 61869553 - Exonic hg38 UCS TCGA-N5-A4RJ-01A 2 1 Out-of-frame Inter-chr p32.3 p15 Seq+ 105980 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACBD3-RAB5B ACBD3 chr1 226159184 - RAB5B chr12 55996523 + Exonic hg38 UCS TCGA-N5-A4RM-01A 8 86 CDS-3'UTR Inter-chr q42.12 q13.2 105981 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELL-ARL4D ELL chr19 18521921 - ARL4D chr17 43399661 + Exonic hg38 UCS TCGA-N5-A4RM-01A 4 8 CDS-5'UTR Inter-chr p13.11 q21.31 Seq+ 105982 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF38-GRHPR RNF38 chr9 36400936 - GRHPR chr9 37425922 + Exonic hg38 UCS TCGA-N5-A4RM-01A 3 6 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 105983 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMIM4-STAB1 SMIM4 chr3 52536906 + STAB1 chr3 52501166 + Exonic hg38 UCS TCGA-N5-A4RN-01A 1 7 Out-of-frame Intra-chr p21.1 p21.1 105984 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMOD3-SPG11 TMOD3 chr15 51829836 + SPG11 chr15 44585850 - Exonic hg38 UCS TCGA-N5-A4RN-01A 1 5 5'UTR-CDS Intra-chr q21.2 q21.1 Seq+ 105985 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAU2-MAP1S MAU2 chr19 19336187 + MAP1S chr19 17734273 + Exonic hg38 UCS TCGA-N5-A4RO-01A 47 274 In-Frame Intra-chr p13.11 p13.11 Seq+ 105986 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMK2G-MYOZ1 CAMK2G chr10 73837468 - MYOZ1 chr10 73640035 - Exonic hg38 UCS TCGA-N5-A4RO-01A 33 171 CDS-5'UTR Intra-chr q22.2 q22.2 Seq+ 105987 ChimerSeq TCGA FAWG TCGA_RNA-Seq WFDC2-COMMD7 WFDC2 chr20 45480094 + COMMD7 chr20 32728142 - Exonic hg38 UCS TCGA-N5-A4RO-01A 11 50 3'UTR-CDS Intra-chr q13.12 q11.21 Seq+ 105988 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCKAP5L-C12orf60 NCKAP5L chr12 49828322 - C12orf60 chr12 14904007 + Exonic hg38 UCS TCGA-N5-A4RO-01A 4 53 5'UTR-3'UTR Intra-chr q13.12 p12.3 Seq+ 105989 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMTC2-SOCS2 TMTC2 chr12 82687669 + SOCS2 chr12 93572685 + Exonic hg38 UCS TCGA-N5-A4RO-01A 3 15 5'UTR-5'UTR Intra-chr q21.31 q22 Seq+ 105990 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDAP1-ZNF789 PDAP1 chr7 99397862 - ZNF789 chr7 99479661 + Exonic hg38 UCS TCGA-N5-A4RO-01A 1 20 Out-of-frame Intra-chr q22.1 q22.1 Transcription factor Seq+ 105991 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF718-SLC25A33 ZNF718 chr4 131505 + SLC25A33 chr1 9567284 + Exonic hg38 UCS TCGA-N5-A4RO-01A 3 6 Out-of-frame Inter-chr p16.3 Transcription factor p36.22 105992 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRDX6-DARS2 PRDX6 chr1 173481482 + DARS2 chr1 173826687 + Exonic hg38 UCS TCGA-N5-A4RO-01A 2 6 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 105993 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD44-CAPRIN1 CD44 chr11 35139370 + CAPRIN1 chr11 34089395 + Exonic hg38 UCS TCGA-N5-A4RO-01A 2 5 In-Frame Intra-chr p13 Oncogene Tumor suppressor gene p13 Seq+ 105994 ChimerSeq TCGA FAWG TCGA_RNA-Seq CECR2-DGCR2 CECR2 chr22 17369909 + DGCR2 chr22 19089490 - Exonic hg38 UCS TCGA-N5-A4RO-01A 1 8 Out-of-frame Intra-chr q11.1 q11.21 105995 ChimerSeq TCGA FAWG TCGA_RNA-Seq WRN-LETM2 WRN chr8 31033973 + LETM2 chr8 38387950 + Exonic hg38 UCS TCGA-N5-A4RO-01A 1 7 5'UTR-5'UTR Intra-chr p12 Oncogene p11.23 Seq+ 105996 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCKAP5L-PDE6H NCKAP5L chr12 49828322 - PDE6H chr12 14977972 + Exonic hg38 UCS TCGA-N5-A4RO-01A 1 2 5'UTR-5'UTR Intra-chr q13.12 p12.3 Seq+ 105997 ChimerSeq TCGA FAWG TCGA_RNA-Seq OCLN-NUDT3 OCLN chr5 69504294 + NUDT3 chr6 34295685 - Exonic hg38 UCS TCGA-N5-A4RS-01A 9 14 Out-of-frame Inter-chr q13.2 p21.31 Seq+ 105998 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF2-MRC2 RNF2 chr1 185087640 + MRC2 chr17 62664548 + Exonic hg38 UCS TCGA-N5-A4RS-01A 3 11 Out-of-frame Inter-chr q25.3 Oncogene q23.2 Seq+ 105999 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP68-NR0B2 CEP68 chr2 65056524 + NR0B2 chr1 26912086 - Exonic hg38 UCS TCGA-N5-A4RS-01A 1 2 5'UTR-CDS Inter-chr p14 p36.11 Tumor suppressor gene 106000 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPX2-DEFB123 TPX2 chr20 31783921 + DEFB123 chr20 31450029 + Exonic hg38 UCS TCGA-N5-A4RT-01A 52 384 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 106001 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6R2-ZDHHC6 PPP6R2 chr22 50406875 + ZDHHC6 chr10 112430907 - Exonic hg38 UCS TCGA-N5-A4RT-01A 10 160 Out-of-frame Inter-chr q13.33 q25.2 Seq+ 106002 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHOT2-DPEP1 RHOT2 chr16 673205 + DPEP1 chr16 89637634 + Exonic hg38 UCS TCGA-N5-A4RT-01A 7 68 Out-of-frame Intra-chr p13.3 q24.3 Seq+ 106003 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D23-TMEM30CP TBC1D23 chr3 100290701 + TMEM30CP chr3 100189941 + Exonic hg38 UCS TCGA-N5-A4RT-01A 3 16 CDS-5'UTR Intra-chr q12.1 q12.1 106004 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRAF3-WDR20 TRAF3 chr14 102903429 + WDR20 chr14 102194938 + Exonic hg38 UCS TCGA-N5-A4RT-01A 4 10 Out-of-frame Intra-chr q32.32 q32.31 Seq+ 106005 ChimerSeq TCGA FAWG TCGA_RNA-Seq ALG12-DENND6B ALG12 chr22 49904179 - DENND6B chr22 50319003 - Exonic hg38 UCS TCGA-N5-A4RT-01A 2 7 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 106006 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRXN2-NSD1 NRXN2 chr11 64620294 - NSD1 chr5 177239756 + Exonic hg38 UCS TCGA-N5-A4RT-01A 1 8 In-Frame Inter-chr q13.1 q35.3 Oncogene Seq+ 106007 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAD9A-KDM2A RAD9A chr11 67321333 + KDM2A chr11 67180079 + Exonic hg38 UCS TCGA-N5-A4RT-01A 2 4 5'UTR-5'UTR Intra-chr q13.2 q13.2 Transcription factor Seq+ 106008 ChimerSeq TCGA FAWG TCGA_RNA-Seq HDAC9-C1orf105 HDAC9 chr7 18496324 + C1orf105 chr1 172465299 + Exonic hg38 UCS TCGA-N5-A4RT-01A 1 6 Out-of-frame Inter-chr p21.1 q24.3 Seq+ 106009 ChimerSeq TCGA FAWG TCGA_RNA-Seq NKAIN3-WRN NKAIN3 chr8 62249127 + WRN chr8 31172995 + Exonic hg38 UCS TCGA-N5-A4RT-01A 1 4 In-Frame Intra-chr q12.3 p12 Oncogene Seq+ 106010 ChimerSeq TCGA FAWG TCGA_RNA-Seq ERVK3-ZNF544 ERVK3 chr19 58306216 + ZNF544 chr19 58277183 + Exonic hg38 UCS TCGA-N5-A4RT-01A 1 3 Out-of-frame Intra-chr q13.43 Transcription factor 106011 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUDT3-TCP11 NUDT3 chr6 34392264 - TCP11 chr6 35129182 - Exonic hg38 UCS TCGA-N5-A4RU-01A 9 36 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 106012 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRB2-ACOX1 GRB2 chr17 75393551 - ACOX1 chr17 75949897 - Exonic hg38 UCS TCGA-N5-A4RU-01A 1 26 Out-of-frame Intra-chr q25.1 q25.1 Seq+ 106013 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASCC1-MICU1 ASCC1 chr10 72213187 - MICU1 chr10 72423371 - Exonic hg38 UCS TCGA-N5-A4RU-01A 1 8 Out-of-frame Intra-chr q22.1 q22.1 Seq+ 106014 ChimerSeq TCGA FAWG TCGA_RNA-Seq KARS-PLGRKT KARS chr16 75640184 - PLGRKT chr9 5361888 - Exonic hg38 UCS TCGA-N5-A4RV-01A 4 41 Out-of-frame Inter-chr q23.1 p24.1 Seq+ 106015 ChimerSeq TCGA FAWG TCGA_RNA-Seq TTC7B-HTRA3 TTC7B chr14 90744792 - HTRA3 chr4 8282437 + Exonic hg38 UCS TCGA-N5-A4RV-01A 4 10 Out-of-frame Inter-chr q32.11 p16.1 Tumor suppressor gene Seq+ 106016 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPRL3-PRR35 NPRL3 chr16 110525 - PRR35 chr16 564674 + Exonic hg38 UCS TCGA-N5-A4RV-01A 1 7 In-Frame Intra-chr p13.3 p13.3 106017 ChimerSeq TCGA FAWG TCGA_RNA-Seq KHDRBS1-NDC1 KHDRBS1 chr1 32014377 + NDC1 chr1 53772489 - Exonic hg38 UCS TCGA-N5-A59E-01A 4 23 Out-of-frame Intra-chr p35.2 p32.3 Seq+ 106018 ChimerSeq TCGA FAWG TCGA_RNA-Seq OSBPL10-STX8 OSBPL10 chr3 31876433 - STX8 chr17 9250645 - Exonic hg38 UCS TCGA-N5-A59E-01A 2 22 Out-of-frame Inter-chr p22.3 p13.1 Seq+ 106019 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAIP2-CXXC5 PAIP2 chr5 139341980 + CXXC5 chr5 139680364 + Exonic hg38 UCS TCGA-N5-A59E-01A 4 10 5'UTR-5'UTR Intra-chr q31.2 Tumor suppressor gene q31.2 Tumor suppressor gene Transcription factor Seq+ 106020 ChimerSeq TCGA FAWG TCGA_RNA-Seq IRAK1BP1-NOL4L IRAK1BP1 chr6 78903110 + NOL4L chr20 32548886 - Exonic hg38 UCS TCGA-N5-A59E-01A 2 11 Out-of-frame Inter-chr q14.1 q11.21 106021 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP38-TMEM154 USP38 chr4 143187961 + TMEM154 chr4 152628561 - Exonic hg38 UCS TCGA-N5-A59E-01A 3 4 In-Frame Intra-chr q31.21 q31.3 Seq+ 106022 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPF2-STARD3 WIPF2 chr17 40265146 + STARD3 chr17 39653481 + Exonic hg38 UCS TCGA-N5-A59E-01A 1 6 CDS-5'UTR Intra-chr q21.2 q12 Seq+ 106023 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAMK2D-ERMAP CAMK2D chr4 113460147 - ERMAP chr1 42825623 + Exonic hg38 UCS TCGA-N5-A59E-01A 1 5 CDS-5'UTR Inter-chr q26 p34.2 106024 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOR1AIP1-EIF1 TOR1AIP1 chr1 179908673 + EIF1 chr17 41689778 + Exonic hg38 UCS TCGA-N5-A59E-01A 1 2 In-Frame Inter-chr q25.2 q21.2 106025 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP6R3-GAL PPP6R3 chr11 68571104 + GAL chr11 68690917 + Exonic hg38 UCS TCGA-N5-A59E-01A 1 1 Out-of-frame Intra-chr q13.2 q13.2 106026 ChimerSeq TCGA FAWG TCGA_RNA-Seq FANCI-HADHB FANCI chr15 89274304 + HADHB chr2 26269953 + Exonic hg38 UCS TCGA-N5-A59F-01A 9 20 In-Frame Inter-chr q26.1 p23.3 Seq+ 106027 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUEDC2-POLR3A CUEDC2 chr10 102432526 - POLR3A chr10 77980273 - Exonic hg38 UCS TCGA-N5-A59F-01A 5 12 5'UTR-CDS Intra-chr q24.32 q22.3 Seq+ 106028 ChimerSeq TCGA FAWG TCGA_RNA-Seq STRA6-NDUFAF1 STRA6 chr15 74183856 - NDUFAF1 chr15 41387593 - Exonic hg38 UCS TCGA-N5-A59F-01A 3 14 Out-of-frame Intra-chr q24.1 q15.1 Seq+ 106029 ChimerSeq TCGA FAWG TCGA_RNA-Seq SKI-ATAD3A SKI chr1 2229735 + ATAD3A chr1 1518921 + Exonic hg38 UCS TCGA-N5-A59F-01A 3 11 In-Frame Intra-chr p36.33 Transcription factor p36.33 Seq+ 106030 ChimerSeq TCGA FAWG TCGA_RNA-Seq CEP295NL-G6PC3 CEP295NL chr17 78873819 - G6PC3 chr17 44074160 + Exonic hg38 UCS TCGA-N5-A59F-01A 2 11 3'UTR-CDS Intra-chr q25.3 q21.31 106031 ChimerSeq TCGA FAWG TCGA_RNA-Seq TIMP2-G6PC3 TIMP2 chr17 78873819 - G6PC3 chr17 44074160 + Exonic hg38 UCS TCGA-N5-A59F-01A 2 11 Out-of-frame Intra-chr q25.3 q21.31 Seq+ 106032 ChimerSeq TCGA FAWG TCGA_RNA-Seq DMD-TSPAN7 DMD chrX 32216916 - TSPAN7 chrX 38666121 + Exonic hg38 UCS TCGA-N5-A59F-01A 1 2 In-Frame Intra-chr p21.1 Tumor suppressor gene p11.4 106033 ChimerSeq TCGA FAWG TCGA_RNA-Seq NXF1-IDH3B NXF1 chr11 62800377 - IDH3B chr20 2658837 - Exonic hg38 UCS TCGA-N5-A59F-01A 1 1 Out-of-frame Inter-chr q12.3 p13 106034 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCM5-HMOX1 MCM5 chr22 35400605 + HMOX1 chr22 35393468 + Exonic hg38 UCS TCGA-N6-A4V9-01A 15 130 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 106035 ChimerSeq TCGA FAWG TCGA_RNA-Seq MARK3-TSGA10IP MARK3 chr14 103457212 + TSGA10IP chr11 65945715 + Exonic hg38 UCS TCGA-N6-A4V9-01A 9 59 Out-of-frame Inter-chr q32.32 CAMK:CAMKL q13.1 Seq+ 106036 ChimerSeq TCGA FAWG TCGA_RNA-Seq LMBR1L-TUBA1B LMBR1L chr12 49103687 - TUBA1B chr12 49129722 - Exonic hg38 UCS TCGA-N6-A4V9-01A 9 39 In-Frame Intra-chr q13.12 q13.12 Seq+ 106037 ChimerSeq TCGA FAWG TCGA_RNA-Seq BIRC6-SLC30A6 BIRC6 chr2 32549481 + SLC30A6 chr2 32184273 + Exonic hg38 UCS TCGA-N6-A4V9-01A 5 49 Out-of-frame Intra-chr p22.3 p22.3 Seq+ 106038 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D8B-RNF128 TBC1D8B chrX 106802983 + RNF128 chrX 106785065 + Exonic hg38 UCS TCGA-N6-A4V9-01A 1 3 Out-of-frame Intra-chr q22.3 q22.3 Seq+ 106039 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIXDC1-C11orf1 DIXDC1 chr11 111937559 + C11orf1 chr11 111883136 + Exonic hg38 UCS TCGA-N6-A4VC-01A 15 141 In-Frame Intra-chr q23.1 q23.1 Seq+ 106040 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF567-HCST ZNF567 chr19 36694876 + HCST chr19 35903351 + Exonic hg38 UCS TCGA-N6-A4VC-01A 4 8 Out-of-frame Intra-chr q13.12 Transcription factor q13.12 Seq+ 106041 ChimerSeq TCGA FAWG TCGA_RNA-Seq B4GALT7-NSD1 B4GALT7 chr5 177600260 + NSD1 chr5 177238237 + Exonic hg38 UCS TCGA-N6-A4VC-01A 2 5 Out-of-frame Intra-chr q35.3 q35.3 Oncogene Seq+ 106042 ChimerSeq TCGA FAWG TCGA_RNA-Seq FUT2-RASIP1 FUT2 chr19 48696079 + RASIP1 chr19 48724960 - Exonic hg38 UCS TCGA-N6-A4VE-01A 12 185 5'UTR-CDS Intra-chr q13.33 q13.33 Seq+ 106043 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCL2L13-DGCR14 BCL2L13 chr22 17683321 + DGCR14 chr22 19137432 - Exonic hg38 UCS TCGA-N6-A4VE-01A 22 91 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 106044 ChimerSeq TCGA FAWG TCGA_RNA-Seq C6orf106-FKBP5 C6orf106 chr6 34696446 - FKBP5 chr6 35642843 - Exonic hg38 UCS TCGA-N6-A4VE-01A 10 77 Out-of-frame Intra-chr p21.31 p21.31 Seq+ 106045 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDRG1-NOL4L PDRG1 chr20 31948808 - NOL4L chr20 32511456 - Exonic hg38 UCS TCGA-N6-A4VE-01A 4 91 In-Frame Intra-chr q11.21 q11.21 106046 ChimerSeq TCGA FAWG TCGA_RNA-Seq EML1-CCNK EML1 chr14 99901039 + CCNK chr14 99507076 + Exonic hg38 UCS TCGA-N6-A4VE-01A 7 32 Out-of-frame Intra-chr q32.2 q32.2 Seq+ 106047 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPKAPK3-S1PR5 MAPKAPK3 chr3 50617784 + S1PR5 chr19 10515029 - Exonic hg38 UCS TCGA-N6-A4VE-01A 1 26 CDS-5'UTR Inter-chr p21.2 CAMK:MAPKAPK p13.2 Seq+ 106048 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPTEP1-CECR7 TPTEP1 chr22 16602215 + CECR7 chr22 17044873 + Exonic hg38 UCS TCGA-N6-A4VE-01A 2 21 5'UTR-5'UTR Intra-chr q11.1 q11.1 Seq+ 106049 ChimerSeq TCGA FAWG TCGA_RNA-Seq CSTF1-RTFDC1 CSTF1 chr20 56395721 + RTFDC1 chr20 56513315 + Exonic hg38 UCS TCGA-N6-A4VE-01A 1 17 Out-of-frame Intra-chr q13.2 q13.31 106050 ChimerSeq TCGA FAWG TCGA_RNA-Seq PSMD8-TJP3 PSMD8 chr19 38374961 + TJP3 chr19 3728424 + Exonic hg38 UCS TCGA-N6-A4VE-01A 2 7 In-Frame Intra-chr q13.2 p13.3 Seq+ 106051 ChimerSeq TCGA FAWG TCGA_RNA-Seq IFT140-ABCA3 IFT140 chr16 1607120 - ABCA3 chr16 2319840 - Exonic hg38 UCS TCGA-N6-A4VE-01A 1 7 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 106052 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF207-RHOT1 ZNF207 chr17 32351912 + RHOT1 chr17 32253085 + Exonic hg38 UCS TCGA-N6-A4VF-01A 84 253 CDS-3'UTR Intra-chr q11.2 Transcription factor q11.2 Seq+ 106053 ChimerSeq TCGA FAWG TCGA_RNA-Seq NARF-P4HB NARF chr17 82481211 + P4HB chr17 81859387 - Exonic hg38 UCS TCGA-N6-A4VF-01A 2 20 In-Frame Intra-chr q25.3 q25.3 Seq+ 106054 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLCD1-CRYBA1 TLCD1 chr17 28724739 - CRYBA1 chr17 29252064 + Exonic hg38 UCS TCGA-N6-A4VF-01A 3 6 Out-of-frame Intra-chr q11.2 q11.2 Seq+ 106055 ChimerSeq TCGA FAWG TCGA_RNA-Seq SMARCA4-RNF216 SMARCA4 chr19 11041560 + RNF216 chr7 5761138 - Exonic hg38 UCS TCGA-N6-A4VG-01A 5 41 CDS-5'UTR Inter-chr p13.2 Oncogene Tumor suppressor gene p22.1 Seq+ 106056 ChimerSeq TCGA FAWG TCGA_RNA-Seq YTHDF2-EYA3 YTHDF2 chr1 28743986 + EYA3 chr1 27978474 - Exonic hg38 UCS TCGA-N6-A4VG-01A 4 38 Out-of-frame Intra-chr p35.3 p35.3 Seq+ 106057 ChimerSeq TCGA FAWG TCGA_RNA-Seq NVL-WDR26 NVL chr1 224311800 - WDR26 chr1 224389860 - Exonic hg38 UCS TCGA-N6-A4VG-01A 2 20 Out-of-frame Intra-chr q42.11 q42.12 Seq+ 106058 ChimerSeq TCGA FAWG TCGA_RNA-Seq WDR82-GLT8D1 WDR82 chr3 52284528 - GLT8D1 chr3 52700496 - Exonic hg38 UCS TCGA-N6-A4VG-01A 3 16 5'UTR-5'UTR Intra-chr p21.2 p21.1 Seq+ 106059 ChimerSeq TCGA FAWG TCGA_RNA-Seq KPNA3-SPRYD7 KPNA3 chr13 49792438 - SPRYD7 chr13 49931134 - Exonic hg38 UCS TCGA-N6-A4VG-01A 3 15 Out-of-frame Intra-chr q14.2 q14.2 Seq+ 106060 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTPN11-CUX2 PTPN11 chr12 112473040 + CUX2 chr12 111341780 + Exonic hg38 UCS TCGA-N6-A4VG-01A 3 9 In-Frame Intra-chr q24.13 Oncogene Tumor suppressor gene q24.11 Transcription factor Seq+ 106061 ChimerSeq TCGA FAWG TCGA_RNA-Seq PITPNM2-MPHOSPH9 PITPNM2 chr12 122992499 - MPHOSPH9 chr12 123203375 - Exonic hg38 UCS TCGA-N6-A4VG-01A 2 6 Out-of-frame Intra-chr q24.31 q24.31 Seq+ 106062 ChimerSeq TCGA FAWG TCGA_RNA-Seq ORAI2-SH2B2 ORAI2 chr7 102439181 + SH2B2 chr7 102314512 + Exonic hg38 UCS TCGA-N6-A4VG-01A 1 4 Out-of-frame Intra-chr q22.1 q22.1 106063 ChimerSeq TCGA FAWG TCGA_RNA-Seq RRAGC-RHBDL2 RRAGC chr1 38851615 - RHBDL2 chr1 38911434 - Exonic hg38 UCS TCGA-N6-A4VG-01A 1 3 In-Frame Intra-chr p34.3 p34.3 Seq+ 106064 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2AK4-IVD EIF2AK4 chr15 39992229 + IVD chr15 40435417 + Exonic hg38 UCS TCGA-N7-A4Y5-01A 6 19 In-Frame Intra-chr q15.1 q15.1 Seq+ 106065 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRA2B-FBXO21 TRA2B chr3 185937825 - FBXO21 chr12 117155948 - Exonic hg38 UCS TCGA-N7-A4Y5-01A 2 4 Out-of-frame Inter-chr q27.2 q24.22 Seq+ 106066 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPZB-TMCO4 CAPZB chr1 19485436 - TMCO4 chr1 19700885 - Exonic hg38 UCS TCGA-N7-A4Y8-01A 4 17 Out-of-frame Intra-chr p36.13 p36.13 Seq+ 106067 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMYND8-WFDC2 ZMYND8 chr20 47347856 - WFDC2 chr20 45479942 + Exonic hg38 UCS TCGA-N7-A4Y8-01A 2 6 In-Frame Intra-chr q13.12 q13.12 Seq+ 106068 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVR-SIRT2 PVR chr19 44644175 + SIRT2 chr19 38881491 - Exonic hg38 UCS TCGA-N7-A4Y8-01A 1 8 CDS-5'UTR Intra-chr q13.31 Tumor suppressor gene Seq+ 106069 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1683-FKBP8 KIAA1683 chr19 18264924 - FKBP8 chr19 18541995 - Exonic hg38 UCS TCGA-N7-A4Y8-01A 1 2 Out-of-frame Intra-chr p13.11 p13.11 106070 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT6-RPL39 SEPT6 chrX 119663482 - RPL39 chrX 119790011 - Exonic hg38 UCS TCGA-N7-A4Y8-01A 1 1 Out-of-frame Intra-chr q24 q24 Seq+ 106071 ChimerSeq TCGA FAWG TCGA_RNA-Seq SBNO2-C1D SBNO2 chr19 1147309 - C1D chr2 68047319 - Exonic hg38 UCS TCGA-N7-A59B-01A 5 11 5'UTR-5'UTR Inter-chr p13.3 p14 Seq+ 106072 ChimerSeq TCGA FAWG TCGA_RNA-Seq SP1-IGFBP6 SP1 chr12 53383622 + IGFBP6 chr12 53100712 + Exonic hg38 UCS TCGA-N7-A59B-01A 1 26 In-Frame Intra-chr q13.13 Transcription factor q13.13 Seq+ 106073 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP5B1-CFL1 AP5B1 chr11 65780442 - CFL1 chr11 65856242 - Exonic hg38 UCS TCGA-N7-A59B-01A 4 11 In-Frame Intra-chr q13.1 q13.1 Seq+ 106074 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM13B-ECSCR FAM13B chr5 138018302 - ECSCR chr5 139454923 - Exonic hg38 UCS TCGA-N7-A59B-01A 1 13 In-Frame Intra-chr q31.2 q31.2 106075 ChimerSeq TCGA FAWG TCGA_RNA-Seq HSPG2-SH3BGRL3 HSPG2 chr1 21881339 - SH3BGRL3 chr1 26280765 + Exonic hg38 UCS TCGA-N7-A59B-01A 1 1 In-Frame Intra-chr p36.12 p36.11 106076 ChimerSeq TCGA FAWG TCGA_RNA-Seq TWF2-ALAS1 TWF2 chr3 52238992 - ALAS1 chr3 52208083 + Exonic hg38 UCS TCGA-N8-A4PI-01A 1 26 In-Frame Intra-chr p21.2 p21.2 Seq+ 106077 ChimerSeq TCGA FAWG TCGA_RNA-Seq ITGB8-ABCB5 ITGB8 chr7 20381885 + ABCB5 chr7 20775978 + Exonic hg38 UCS TCGA-N8-A4PI-01A 4 11 CDS-3'UTR Intra-chr p21.1 p21.1 Seq+ 106078 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC3A2-ASRGL1 SLC3A2 chr11 62871669 + ASRGL1 chr11 62389133 + Exonic hg38 UCS TCGA-N8-A4PI-01A 2 18 Out-of-frame Intra-chr q12.3 q12.3 Seq+ 106079 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARFGEF1-PPP1R42 ARFGEF1 chr8 67251299 - PPP1R42 chr8 67014592 - Exonic hg38 UCS TCGA-N8-A4PI-01A 1 16 In-Frame Intra-chr q13.2 q13.1 106080 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOTCH2NL-HFE2 NOTCH2NL chr1 146228709 - HFE2 chr1 146019734 - Exonic hg38 UCS TCGA-N8-A4PI-01A 1 12 Out-of-frame Intra-chr q21.1 q21.1 Seq+ 106081 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCND3-LUZP1 CCND3 chr6 42048501 - LUZP1 chr1 23089053 - Exonic hg38 UCS TCGA-N8-A4PI-01A 2 4 5'UTR-CDS Inter-chr p21.1 p36.12 Seq+ 106082 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS6-NEK5 INTS6 chr13 51451025 - NEK5 chr13 52037218 - Exonic hg38 UCS TCGA-N8-A4PI-01A 2 2 Out-of-frame Intra-chr q14.3 Tumor suppressor gene q14.3 Other:NEK Seq+ 106083 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIM16-TOP3A TRIM16 chr17 15651091 - TOP3A chr17 18308941 - Exonic hg38 UCS TCGA-N8-A4PI-01A 1 6 CDS-5'UTR Intra-chr p12 106084 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSI2-CISD3 MSI2 chr17 57401471 + CISD3 chr17 38730760 + Exonic hg38 UCS TCGA-N8-A4PL-01A 38 178 CDS-3'UTR Intra-chr q22 Seq+ 106085 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF3C-SRM KIF3C chr2 25980373 - SRM chr1 11059345 - Exonic hg38 UCS TCGA-N8-A4PL-01A 4 33 Out-of-frame Inter-chr p23.3 p36.22 TK:Src Seq+ 106086 ChimerSeq TCGA FAWG TCGA_RNA-Seq CABIN1-SLC2A11 CABIN1 chr22 24119698 + SLC2A11 chr22 23882459 + Exonic hg38 UCS TCGA-N8-A4PL-01A 2 19 CDS-3'UTR Intra-chr q11.23 Seq+ 106087 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB33B-NAA15 RAB33B chr4 139454444 + NAA15 chr4 139334174 + Exonic hg38 UCS TCGA-N8-A4PL-01A 2 8 In-Frame Intra-chr q31.1 q31.1 Seq+ 106088 ChimerSeq TCGA FAWG TCGA_RNA-Seq GRAMD4-DRC3 GRAMD4 chr22 46675552 + DRC3 chr17 17992765 + Exonic hg38 UCS TCGA-N8-A4PL-01A 1 9 In-Frame Inter-chr q13.31 p11.2 106089 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF675-SLC27A1 ZNF675 chr19 23687031 - SLC27A1 chr19 17470540 + Exonic hg38 UCS TCGA-N8-A4PL-01A 1 8 CDS-5'UTR Intra-chr p12 Transcription factor p13.11 Seq+ 106090 ChimerSeq TCGA FAWG TCGA_RNA-Seq TM9SF4-DEFB123 TM9SF4 chr20 32155186 + DEFB123 chr20 31450029 + Exonic hg38 UCS TCGA-N8-A4PM-01A 69 487 Out-of-frame Intra-chr q11.21 q11.21 Seq+ 106091 ChimerSeq TCGA FAWG TCGA_RNA-Seq PREX1-KCNB1 PREX1 chr20 48745025 - KCNB1 chr20 49310799 - Exonic hg38 UCS TCGA-N8-A4PM-01A 16 98 CDS-3'UTR Intra-chr q13.13 q13.13 106092 ChimerSeq TCGA FAWG TCGA_RNA-Seq MSH2-SPTLC1 MSH2 chr2 47445657 + SPTLC1 chr9 92038365 - Exonic hg38 UCS TCGA-N8-A4PM-01A 5 11 Out-of-frame Inter-chr p21 Oncogene Tumor suppressor gene q22.31 Seq+ 106093 ChimerSeq TCGA FAWG TCGA_RNA-Seq LUC7L3-MYCBPAP LUC7L3 chr17 50719831 + MYCBPAP chr17 50516570 + Exonic hg38 UCS TCGA-N8-A4PM-01A 1 8 Out-of-frame Intra-chr q21.33 q21.33 Seq+ 106094 ChimerSeq TCGA FAWG TCGA_RNA-Seq ROR2-FAM50B ROR2 chr9 91883258 - FAM50B chr6 3849789 + Exonic hg38 UCS TCGA-N8-A4PM-01A 1 6 CDS-5'UTR Inter-chr q22.31 TK:Ror Tumor suppressor gene p25.2 Seq+ 106095 ChimerSeq TCGA FAWG TCGA_RNA-Seq WIPF2-XYLT2 WIPF2 chr17 40219492 + XYLT2 chr17 50353630 + Exonic hg38 UCS TCGA-N8-A4PM-01A 1 4 5'UTR-5'UTR Intra-chr q21.2 q21.33 Seq+ 106096 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCKDHA-CCDC97 BCKDHA chr19 41414157 + CCDC97 chr19 41316384 + Exonic hg38 UCS TCGA-N8-A4PM-01A 1 3 In-Frame Intra-chr q13.2 q13.2 106097 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERINC3-NCOA5 SERINC3 chr20 44511289 - NCOA5 chr20 46062889 - Exonic hg38 UCS TCGA-N8-A4PN-01A 30 186 In-Frame Intra-chr q13.12 q13.12 Tumor suppressor gene Seq+ 106098 ChimerSeq TCGA FAWG TCGA_RNA-Seq DLGAP4-TP53TG5 DLGAP4 chr20 36462599 + TP53TG5 chr20 45377613 - Exonic hg38 UCS TCGA-N8-A4PN-01A 39 149 Out-of-frame Intra-chr q11.23 q13.12 Seq+ 106099 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM212B-BCAS4 FAM212B chr1 111739186 - BCAS4 chr20 50876486 + Exonic hg38 UCS TCGA-N8-A4PN-01A 31 126 Out-of-frame Inter-chr p13.2 q13.13 Seq+ 106100 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPM-MCOLN1 HNRNPM chr19 8462581 + MCOLN1 chr19 7527520 + Exonic hg38 UCS TCGA-N8-A4PN-01A 23 85 Out-of-frame Intra-chr p13.2 p13.2 Seq+ 106101 ChimerSeq TCGA FAWG TCGA_RNA-Seq TSHZ2-TOX2 TSHZ2 chr20 52973333 + TOX2 chr20 43973367 + Exonic hg38 UCS TCGA-N8-A4PN-01A 12 31 Out-of-frame Intra-chr q13.2 Transcription factor q13.12 Seq+ 106102 ChimerSeq TCGA FAWG TCGA_RNA-Seq PAK4-RPGR PAK4 chr19 39125919 + RPGR chrX 38291484 - Exonic hg38 UCS TCGA-N8-A4PN-01A 2 21 5'UTR-CDS Inter-chr q13.2 STE:STE20 p11.4 Seq+ 106103 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPN2-ZBTB46 RPN2 chr20 37230059 + ZBTB46 chr20 63790790 - Exonic hg38 UCS TCGA-N8-A4PN-01A 4 9 CDS-5'UTR Intra-chr q11.23 q13.33 Transcription factor Seq+ 106104 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM41A-EPHA2 TMEM41A chr3 185488945 - EPHA2 chr1 16150963 - Exonic hg38 UCS TCGA-N8-A4PN-01A 4 6 3'UTR-CDS Inter-chr q27.2 p36.13 Tumor suppressor gene Seq+ 106105 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP1S-CRTC1 MAP1S chr19 17733428 + CRTC1 chr19 18742910 + Exonic hg38 UCS TCGA-N8-A4PN-01A 1 7 In-Frame Intra-chr p13.11 p13.11 Oncogene Seq+ 106106 ChimerSeq TCGA FAWG TCGA_RNA-Seq OBSL1-IGF2 OBSL1 chr2 219558331 - IGF2 chr11 2130177 - Exonic hg38 UCS TCGA-N8-A4PN-01A 1000 1000 Out-of-frame Inter-chr q35 p15.5 Oncogene 106107 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF638-TRIM55 ZNF638 chr2 71408247 + TRIM55 chr8 66174471 + Exonic hg38 UCS TCGA-N8-A4PO-01A 13 84 In-Frame Inter-chr p13.3 q13.1 Seq+ 106108 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC27-PTPRS CDC27 chr17 47181562 - PTPRS chr19 5159104 - Exonic hg38 UCS TCGA-N8-A4PO-01A 5 48 3'UTR-3'UTR Inter-chr q21.32 p13.3 106109 ChimerSeq TCGA FAWG TCGA_RNA-Seq THOC1-THADA THOC1 chr18 252539 - THADA chr2 43428231 - Exonic hg38 UCS TCGA-N8-A4PO-01A 11 19 In-Frame Inter-chr p11.32 p21 Seq+ 106110 ChimerSeq TCGA FAWG TCGA_RNA-Seq NBAS-SPIRE1 NBAS chr2 15415546 - SPIRE1 chr18 12512531 - Exonic hg38 UCS TCGA-N8-A4PO-01A 2 5 In-Frame Inter-chr p24.3 p11.21 Seq+ 106111 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPB41L1-PHF20 EPB41L1 chr20 36112480 + PHF20 chr20 35842573 + Exonic hg38 UCS TCGA-N8-A4PO-01A 1 7 5'UTR-CDS Intra-chr q11.23 q11.22 Transcription factor Seq+ 106112 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC12A8-PARD6G SLC12A8 chr3 125177743 - PARD6G chr18 80202932 - Exonic hg38 UCS TCGA-N8-A4PO-01A 1 1 Out-of-frame Inter-chr q21.2 q23 106113 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPIG-SSB PPIG chr2 169604261 + SSB chr2 169792573 + Exonic hg38 UCS TCGA-N8-A4PP-01A 42 208 CDS-5'UTR Intra-chr q31.1 q31.1 Seq+ 106114 ChimerSeq TCGA FAWG TCGA_RNA-Seq DPY19L3-TDRD12 DPY19L3 chr19 32411372 + TDRD12 chr19 32731725 + Exonic hg38 UCS TCGA-N8-A4PP-01A 7 90 In-Frame Intra-chr q13.11 q13.11 Seq+ 106115 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB5B-DGKA RAB5B chr12 55974139 + DGKA chr12 55936423 + Exonic hg38 UCS TCGA-N8-A4PP-01A 23 14 5'UTR-5'UTR Intra-chr q13.2 q13.2 Seq+ 106116 ChimerSeq TCGA FAWG TCGA_RNA-Seq JAGN1-CPNE9 JAGN1 chr3 9893389 + CPNE9 chr3 9729370 + Exonic hg38 UCS TCGA-N8-A4PP-01A 10 54 Out-of-frame Intra-chr p25.3 p25.3 Seq+ 106117 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF546-HNRNPD ZNF546 chr19 40008565 + HNRNPD chr4 82359639 - Exonic hg38 UCS TCGA-N8-A4PP-01A 7 42 3'UTR-CDS Inter-chr Transcription factor q21.22 Seq+ 106118 ChimerSeq TCGA FAWG TCGA_RNA-Seq ENSAP2-KLHDC9 ENSAP2 chr14 82692707 - KLHDC9 chr1 161100061 + Exonic hg38 UCS TCGA-N8-A4PP-01A 6 20 Out-of-frame Inter-chr q31.1 q23.3 Seq+ 106119 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPON1-THAP2 SPON1 chr11 13982953 + THAP2 chr12 71674203 + Exonic hg38 UCS TCGA-N8-A4PP-01A 1 36 Out-of-frame Inter-chr p15.2 q21.1 Transcription factor Seq+ 106120 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB7A-TRMT1 RAB7A chr3 128807671 + TRMT1 chr19 13110306 - Exonic hg38 UCS TCGA-N8-A4PP-01A 3 7 In-Frame Inter-chr q21.3 Tumor suppressor gene p13.13 Seq+ 106121 ChimerSeq TCGA FAWG TCGA_RNA-Seq RCL1-SMCP RCL1 chr9 4841357 + SMCP chr1 152884403 + Exonic hg38 UCS TCGA-N8-A4PP-01A 3 5 CDS-5'UTR Inter-chr p24.1 q21.3 Seq+ 106122 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF430-OR7E24 ZNF430 chr19 21034184 + OR7E24 chr19 9251085 + Exonic hg38 UCS TCGA-N8-A4PP-01A 3 4 Out-of-frame Intra-chr Transcription factor p13.2 Seq+ 106123 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCY9-NLRC3 ADCY9 chr16 4113750 - NLRC3 chr16 3544329 - Exonic hg38 UCS TCGA-N8-A4PP-01A 2 6 Out-of-frame Intra-chr p13.3 p13.3 Seq+ 106124 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRY2-C11orf49 CRY2 chr11 45858873 + C11orf49 chr11 47052388 + Exonic hg38 UCS TCGA-N8-A4PP-01A 2 5 In-Frame Intra-chr p11.2 p11.2 Seq+ 106125 ChimerSeq TCGA FAWG TCGA_RNA-Seq SSX2IP-WDPCP SSX2IP chr1 84690154 - WDPCP chr2 63711591 - Exonic hg38 UCS TCGA-N8-A4PP-01A 1 1 5'UTR-5'UTR Inter-chr p22.3 p15 106126 ChimerSeq TCGA FAWG TCGA_RNA-Seq RARA-SLC9A3R1 RARA chr17 40352507 + SLC9A3R1 chr17 74762012 + Exonic hg38 UCS TCGA-N8-A4PQ-01A 31 153 In-Frame Intra-chr q21.2 Oncogene Transcription factor q25.1 Tumor suppressor gene Seq+ 106127 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPRIP-HOXB13 MPRIP chr17 17078076 + HOXB13 chr17 48727043 - Exonic hg38 UCS TCGA-N8-A4PQ-01A 14 112 Out-of-frame Intra-chr p11.2 q21.32 Tumor suppressor gene Transcription factor Seq+ 106128 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF423-CCAR1 ZNF423 chr16 49730771 - CCAR1 chr10 68786136 + Exonic hg38 UCS TCGA-N8-A4PQ-01A 2 106 In-Frame Inter-chr q12.1 Transcription factor q21.3 Tumor suppressor gene Seq+ 106129 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACOT11-GIP ACOT11 chr1 54542437 + GIP chr17 48967253 - Exonic hg38 UCS TCGA-N8-A4PQ-01A 10 37 5'UTR-5'UTR Inter-chr p32.3 q21.32 Seq+ 106130 ChimerSeq TCGA FAWG TCGA_RNA-Seq DGKD-SLC25A17 DGKD chr2 233390483 + SLC25A17 chr22 40779125 - Exonic hg38 UCS TCGA-N8-A4PQ-01A 9 40 Out-of-frame Inter-chr q13.2 Seq+ 106131 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMX2-MED19 TMX2 chr11 57712807 + MED19 chr11 57705229 - Exonic hg38 UCS TCGA-N8-A4PQ-01A 5 36 Out-of-frame Intra-chr q12.1 q12.1 Seq+ 106132 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNA13-MXRA7 GNA13 chr17 65053502 - MXRA7 chr17 76685165 - Exonic hg38 UCS TCGA-N8-A4PQ-01A 6 31 Out-of-frame Intra-chr q24.1 q25.1 Seq+ 106133 ChimerSeq TCGA FAWG TCGA_RNA-Seq MKL1-INPP5D MKL1 chr22 40552106 - INPP5D chr2 233169305 + Exonic hg38 UCS TCGA-N8-A4PQ-01A 5 18 Out-of-frame Inter-chr q13.2 Seq+ 106134 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASA4-DRICH1 RASA4 chr7 102608761 - DRICH1 chr22 23622176 - Exonic hg38 UCS TCGA-N8-A4PQ-01A 2 9 In-Frame Inter-chr q22.1 q11.23 106135 ChimerSeq TCGA FAWG TCGA_RNA-Seq TLK2-FN3KRP TLK2 chr17 62481206 + FN3KRP chr17 82718906 + Exonic hg38 UCS TCGA-N8-A4PQ-01A 1 13 In-Frame Intra-chr q23.2 Other:TLK q25.3 106136 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOX13-PPFIA4 SOX13 chr1 204073711 + PPFIA4 chr1 203053753 + Exonic hg38 UCS TCGA-N8-A4PQ-01A 2 7 5'UTR-CDS Intra-chr q32.1 Transcription factor q32.1 Seq+ 106137 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOR1-PRR11 NCOR1 chr17 16186554 - PRR11 chr17 59169748 + Exonic hg38 UCS TCGA-N8-A4PQ-01A 1 9 CDS-5'UTR Intra-chr p11.2 Oncogene q22 Seq+ 106138 ChimerSeq TCGA FAWG TCGA_RNA-Seq FCHSD2-ABL1 FCHSD2 chr11 73083695 - ABL1 chr9 130854064 + Exonic hg38 UCS TCGA-N8-A4PQ-01A 2 3 Out-of-frame Inter-chr q13.4 q34.12 TK:Abl Oncogene Seq+ 106139 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOR1-MPRIP NCOR1 chr17 16171803 - MPRIP chr17 17075710 + Exonic hg38 UCS TCGA-N8-A4PQ-01A 1 6 In-Frame Intra-chr p11.2 Oncogene p11.2 106140 ChimerSeq TCGA FAWG TCGA_RNA-Seq TANGO6-CARMIL2 TANGO6 chr16 68843711 + CARMIL2 chr16 67645540 + Exonic hg38 UCS TCGA-N8-A4PQ-01A 1 3 In-Frame Intra-chr q22.1 q22.1 106141 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPBP1L1-MOB3C GPBP1L1 chr1 45686412 - MOB3C chr1 46610204 - Exonic hg38 UCS TCGA-N8-A4PQ-01A 1 2 5'UTR-CDS Intra-chr p34.1 Transcription factor p33 106142 ChimerSeq TCGA FAWG TCGA_RNA-Seq UVRAG-SPCS2 UVRAG chr11 75861780 + SPCS2 chr11 74976857 + Exonic hg38 UCS TCGA-N8-A4PQ-01A 1 1 Out-of-frame Intra-chr q13.5 Tumor suppressor gene q13.4 106143 ChimerSeq TCGA FAWG TCGA_RNA-Seq LSM12-ITGA2B LSM12 chr17 44063801 - ITGA2B chr17 44372423 - Exonic hg38 UCS TCGA-N8-A56S-01A 38 56 In-Frame Intra-chr q21.31 q21.31 Seq+ 106144 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNX11-SNF8 SNX11 chr17 48107838 + SNF8 chr17 48943975 - Exonic hg38 UCS TCGA-N8-A56S-01A 27 100 5'UTR-5'UTR Intra-chr q21.32 q21.32 Seq+ 106145 ChimerSeq TCGA FAWG TCGA_RNA-Seq AP1S1-PTOV1 AP1S1 chr7 101154517 + PTOV1 chr19 49854406 + Exonic hg38 UCS TCGA-N8-A56S-01A 38 29 3'UTR-CDS Inter-chr q22.1 q13.33 Seq+ 106146 ChimerSeq TCGA FAWG TCGA_RNA-Seq NFX1-DNAJA1 NFX1 chr9 33290597 + DNAJA1 chr9 33029885 + Exonic hg38 UCS TCGA-N8-A56S-01A 14 48 In-Frame Intra-chr p13.3 Transcription factor p21.1 Seq+ 106147 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP188-TBC1D13 NUP188 chr9 128959134 + TBC1D13 chr9 128803250 + Exonic hg38 UCS TCGA-N8-A56S-01A 14 34 In-Frame Intra-chr q34.11 q34.11 Seq+ 106148 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC4-RARRES3 DNAJC4 chr11 64230940 + RARRES3 chr11 63539516 + Exonic hg38 UCS TCGA-N8-A56S-01A 12 41 Out-of-frame Intra-chr q13.1 q12.3 Tumor suppressor gene Seq+ 106149 ChimerSeq TCGA FAWG TCGA_RNA-Seq KANSL1-SPOP KANSL1 chr17 46223671 - SPOP chr17 49622876 - Exonic hg38 UCS TCGA-N8-A56S-01A 4 73 5'UTR-5'UTR Intra-chr q21.33 Oncogene Tumor suppressor gene Seq+ 106150 ChimerSeq TCGA FAWG TCGA_RNA-Seq BPTF-NOL11 BPTF chr17 67866687 + NOL11 chr17 67743743 + Exonic hg38 UCS TCGA-N8-A56S-01A 7 42 Out-of-frame Intra-chr q24.2 Transcription factor q24.2 Seq+ 106151 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASB1-RBM44 ASB1 chr2 238433695 + RBM44 chr2 237833997 + Exonic hg38 UCS TCGA-N8-A56S-01A 5 40 Out-of-frame Intra-chr q37.3 q37.3 Seq+ 106152 ChimerSeq TCGA FAWG TCGA_RNA-Seq DSTYK-CSRP1 DSTYK chr1 205211271 - CSRP1 chr1 201485376 - Exonic hg38 UCS TCGA-N8-A56S-01A 7 29 Out-of-frame Intra-chr q32.1 q32.1 Seq+ 106153 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP6-DUSP16 LRP6 chr12 12244262 - DUSP16 chr12 12521463 - Exonic hg38 UCS TCGA-N8-A56S-01A 7 21 5'UTR-5'UTR Intra-chr Seq+ 106154 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACOT7-DNAJC11 ACOT7 chr1 6281102 - DNAJC11 chr1 6667810 - Exonic hg38 UCS TCGA-N8-A56S-01A 5 27 In-Frame Intra-chr p36.31 p36.31 Tumor suppressor gene Seq+ 106155 ChimerSeq TCGA FAWG TCGA_RNA-Seq LUC7L3-CEP250 LUC7L3 chr17 50746702 + CEP250 chr20 35490637 + Exonic hg38 UCS TCGA-N8-A56S-01A 5 24 Out-of-frame Inter-chr q21.33 q11.22 Seq+ 106156 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC39A11-CA11 SLC39A11 chr17 73084808 - CA11 chr19 48640280 - Exonic hg38 UCS TCGA-N8-A56S-01A 6 20 In-Frame Inter-chr q25.1 q13.33 Tumor suppressor gene Seq+ 106157 ChimerSeq TCGA FAWG TCGA_RNA-Seq RMI2-CLEC16A RMI2 chr16 11345766 + CLEC16A chr16 11120615 + Exonic hg38 UCS TCGA-N8-A56S-01A 3 18 In-Frame Intra-chr p13.13 p13.13 Seq+ 106158 ChimerSeq TCGA FAWG TCGA_RNA-Seq SCRN2-GIP SCRN2 chr17 47838270 - GIP chr17 48964480 - Exonic hg38 UCS TCGA-N8-A56S-01A 2 22 Out-of-frame Intra-chr q21.32 q21.32 Seq+ 106159 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC7-ACAD11 ZDHHC7 chr16 85011286 - ACAD11 chr3 132631479 - Exonic hg38 UCS TCGA-N8-A56S-01A 5 9 5'UTR-CDS Inter-chr q24.1 q22.1 Seq+ 106160 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC1A6-AKAP8L SLC1A6 chr19 14964319 - AKAP8L chr19 15380612 - Exonic hg38 UCS TCGA-N8-A56S-01A 1 22 In-Frame Intra-chr p13.12 p13.12 Transcription factor Seq+ 106161 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF24-ZCCHC7 KIF24 chr9 34286617 - ZCCHC7 chr9 37327799 + Exonic hg38 UCS TCGA-N8-A56S-01A 3 12 In-Frame Intra-chr p13.3 p13.2 Seq+ 106162 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLCN4-SHROOM2 CLCN4 chrX 10187614 + SHROOM2 chrX 9873652 + Exonic hg38 UCS TCGA-N8-A56S-01A 3 11 Out-of-frame Intra-chr p22.2 p22.2 Seq+ 106163 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNAJC28-GART DNAJC28 chr21 33491602 - GART chr21 33506104 - Exonic hg38 UCS TCGA-N8-A56S-01A 1 19 5'UTR-5'UTR Intra-chr Seq+ 106164 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELK3-PGAM1P5 ELK3 chr12 96223773 + PGAM1P5 chr12 95649328 + Exonic hg38 UCS TCGA-N8-A56S-01A 3 11 CDS-5'UTR Intra-chr q23.1 Transcription factor q22 Seq+ 106165 ChimerSeq TCGA FAWG TCGA_RNA-Seq CDC6-LRRC59 CDC6 chr17 40294056 + LRRC59 chr17 50388132 - Exonic hg38 UCS TCGA-N8-A56S-01A 3 10 3'UTR-CDS Intra-chr q21.2 q21.33 Seq+ 106166 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZHX2-PPM1B ZHX2 chr8 122781946 + PPM1B chr2 44201186 + Exonic hg38 UCS TCGA-N8-A56S-01A 3 9 5'UTR-5'UTR Inter-chr q24.13 Tumor suppressor gene Transcription factor p21 Seq+ 106167 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTN4-SPINT2 ACTN4 chr19 38718074 + SPINT2 chr19 38283627 + Exonic hg38 UCS TCGA-N8-A56S-01A 3 8 3'UTR-CDS Intra-chr q13.2 Tumor suppressor gene Seq+ 106168 ChimerSeq TCGA FAWG TCGA_RNA-Seq SENP2-MAP3K13 SENP2 chr3 185626393 + MAP3K13 chr3 185463550 + Exonic hg38 UCS TCGA-N8-A56S-01A 3 7 In-Frame Intra-chr q27.2 q27.2 Seq+ 106169 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASB1-RAMP1 ASB1 chr2 238433695 + RAMP1 chr2 237911528 + Exonic hg38 UCS TCGA-N8-A56S-01A 2 10 In-Frame Intra-chr q37.3 q37.3 Seq+ 106170 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATP6V0A4-TM4SF20 ATP6V0A4 chr7 138721897 - TM4SF20 chr2 227370980 - Exonic hg38 UCS TCGA-N8-A56S-01A 3 3 In-Frame Inter-chr q34 q36.3 Seq+ 106171 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHACTR4-MED18 PHACTR4 chr1 28407463 + MED18 chr1 28330597 + Exonic hg38 UCS TCGA-N8-A56S-01A 1 10 CDS-3'UTR Intra-chr p35.3 Tumor suppressor gene p35.3 106172 ChimerSeq TCGA FAWG TCGA_RNA-Seq VMP1-PRR11 VMP1 chr17 59707748 + PRR11 chr17 59169748 + Exonic hg38 UCS TCGA-N8-A56S-01A 1 10 5'UTR-5'UTR Intra-chr q23.1 q22 Seq+ 106173 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNQ1-B4GALNT4 KCNQ1 chr11 2588854 + B4GALNT4 chr11 372662 + Exonic hg38 UCS TCGA-N8-A56S-01A 1 7 3'UTR-CDS Intra-chr p15.5 p15.5 Seq+ 106174 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRABD2B-PDZK1P1 TRABD2B chr1 47994034 - PDZK1P1 chr1 148003982 - Exonic hg38 UCS TCGA-N8-A56S-01A 1 7 CDS-3'UTR Intra-chr p33 q21.2 106175 ChimerSeq TCGA FAWG TCGA_RNA-Seq PTCD1-PEX11G PTCD1 chr7 99429103 - PEX11G chr19 7482211 - Exonic hg38 UCS TCGA-N8-A56S-01A 1 6 In-Frame Inter-chr q22.1 p13.2 106176 ChimerSeq TCGA FAWG TCGA_RNA-Seq GLB1-SUSD5 GLB1 chr3 33046120 - SUSD5 chr3 33175074 - Exonic hg38 UCS TCGA-N8-A56S-01A 1 3 Out-of-frame Intra-chr p22.3 p22.3 106177 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBN2-TMPRSS6 FBN2 chr5 128374681 - TMPRSS6 chr22 37103522 - Exonic hg38 UCS TCGA-N8-A56S-01A 1000 1000 Out-of-frame Inter-chr q23.3 q12.3 Tumor suppressor gene 106178 ChimerSeq TCGA FAWG TCGA_RNA-Seq YWHAE-GCGR YWHAE chr17 1400047 - GCGR chr17 81808842 + Exonic hg38 UCS TCGA-N9-A4PZ-01A 25 149 5'UTR-5'UTR Intra-chr p13.3 q25.3 Seq+ 106179 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD2-PALMD SETD2 chr3 47163854 - PALMD chr1 99694019 + Exonic hg38 UCS TCGA-N9-A4PZ-01A 38 76 Out-of-frame Inter-chr p21.31 Oncogene Tumor suppressor gene p21.2 Seq+ 106180 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R12C-CLEC11A PPP1R12C chr19 55098784 - CLEC11A chr19 50723905 + Exonic hg38 UCS TCGA-N9-A4PZ-01A 22 37 In-Frame Intra-chr q13.42 q13.33 Seq+ 106181 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF4G3-LAMC1 EIF4G3 chr1 21050866 - LAMC1 chr1 183116577 + Exonic hg38 UCS TCGA-N9-A4PZ-01A 16 51 5'UTR-CDS Intra-chr p36.12 q25.3 Seq+ 106182 ChimerSeq TCGA FAWG TCGA_RNA-Seq EPHA2-LSM14B EPHA2 chr1 16148378 - LSM14B chr20 62124617 + Exonic hg38 UCS TCGA-N9-A4PZ-01A 10 51 In-Frame Inter-chr p36.13 Tumor suppressor gene q13.33 Seq+ 106183 ChimerSeq TCGA FAWG TCGA_RNA-Seq IVD-ECE1 IVD chr15 40413087 + ECE1 chr1 21260392 - Exonic hg38 UCS TCGA-N9-A4PZ-01A 8 44 In-Frame Inter-chr q15.1 p36.12 Seq+ 106184 ChimerSeq TCGA FAWG TCGA_RNA-Seq MIGA2-P4HB MIGA2 chr9 129063631 + P4HB chr17 81847347 - Exonic hg38 UCS TCGA-N9-A4PZ-01A 11 23 In-Frame Inter-chr q34.11 q25.3 106185 ChimerSeq TCGA FAWG TCGA_RNA-Seq NOSIP-RCN3 NOSIP chr19 49559934 - RCN3 chr19 49537033 + Exonic hg38 UCS TCGA-N9-A4PZ-01A 5 41 Out-of-frame Intra-chr q13.33 q13.33 Seq+ 106186 ChimerSeq TCGA FAWG TCGA_RNA-Seq HTR7-VAC14 HTR7 chr10 90857133 - VAC14 chr16 70763025 - Exonic hg38 UCS TCGA-N9-A4PZ-01A 6 27 In-Frame Inter-chr q23.31 q22.2 Seq+ 106187 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRIOBP-PES1 TRIOBP chr22 37765817 + PES1 chr22 30592398 - Exonic hg38 UCS TCGA-N9-A4PZ-01A 4 16 CDS-5'UTR Intra-chr q13.1 q12.2 Seq+ 106188 ChimerSeq TCGA FAWG TCGA_RNA-Seq ASXL1-CCM2L ASXL1 chr20 32369123 + CCM2L chr20 32025856 + Exonic hg38 UCS TCGA-N9-A4PZ-01A 4 11 Out-of-frame Intra-chr q11.21 Oncogene Tumor suppressor gene q11.21 Seq+ 106189 ChimerSeq TCGA FAWG TCGA_RNA-Seq NCOA1-FAM228B NCOA1 chr2 24697798 + FAM228B chr2 24095141 + Exonic hg38 UCS TCGA-N9-A4PZ-01A 3 15 CDS-5'UTR Intra-chr p23.3 Oncogene Transcription factor p23.3 Seq+ 106190 ChimerSeq TCGA FAWG TCGA_RNA-Seq GTF2IRD1-POLD2 GTF2IRD1 chr7 74545809 + POLD2 chr7 44122109 - Exonic hg38 UCS TCGA-N9-A4PZ-01A 2 18 In-Frame Intra-chr q11.23 Transcription factor p13 Seq+ 106191 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUCKS1-SDCCAG8 NUCKS1 chr1 205727700 - SDCCAG8 chr1 243415702 + Exonic hg38 UCS TCGA-N9-A4PZ-01A 1 18 CDS-3'UTR Intra-chr q32.1 Seq+ 106192 ChimerSeq TCGA FAWG TCGA_RNA-Seq ACTR1A-EFCAB13 ACTR1A chr10 102502600 - EFCAB13 chr17 47370437 + Exonic hg38 UCS TCGA-N9-A4PZ-01A 1 12 Out-of-frame Inter-chr q24.32 q21.32 106193 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNM2-MRPL4 DNM2 chr19 10718403 + MRPL4 chr19 10252146 + Exonic hg38 UCS TCGA-N9-A4PZ-01A 1 12 CDS-5'UTR Intra-chr p13.2 p13.2 Seq+ 106194 ChimerSeq TCGA FAWG TCGA_RNA-Seq RHPN2-MACROD1 RHPN2 chr19 33026504 - MACROD1 chr11 64152393 - Exonic hg38 UCS TCGA-N9-A4PZ-01A 2 2 Out-of-frame Inter-chr q13.11 q13.1 Seq+ 106195 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMX2-IFT46 TMX2 chr11 57712807 + IFT46 chr11 118565061 - Exonic hg38 UCS TCGA-N9-A4PZ-01A 1 6 5'UTR-5'UTR Intra-chr q12.1 q23.3 Seq+ 106196 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC16A7-ATP23 SLC16A7 chr12 59596236 + ATP23 chr12 57945628 + Exonic hg38 UCS TCGA-N9-A4PZ-01A 1 5 5'UTR-5'UTR Intra-chr q14.1 106197 ChimerSeq TCGA FAWG TCGA_RNA-Seq SETD2-KIF9 SETD2 chr3 47163854 - KIF9 chr3 47248086 - Exonic hg38 UCS TCGA-N9-A4PZ-01A 1 4 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Seq+ 106198 ChimerSeq TCGA FAWG TCGA_RNA-Seq VTI1A-HDAC1 VTI1A chr10 112538330 + HDAC1 chr1 32324479 + Exonic hg38 UCS TCGA-N9-A4Q1-01A 7 14 In-Frame Inter-chr q25.2 p35.2 Tumor suppressor gene Seq+ 106199 ChimerSeq TCGA FAWG TCGA_RNA-Seq AIP-PRSS53 AIP chr11 67483854 + PRSS53 chr16 31083808 - Exonic hg38 UCS TCGA-N9-A4Q1-01A 6 9 Out-of-frame Inter-chr q13.2 Tumor suppressor gene p11.2 Seq+ 106200 ChimerSeq TCGA FAWG TCGA_RNA-Seq KDM4B-UVRAG KDM4B chr19 5016339 + UVRAG chr11 76140711 + Exonic hg38 UCS TCGA-N9-A4Q1-01A 3 10 5'UTR-CDS Inter-chr p13.3 q13.5 Tumor suppressor gene Seq+ 106201 ChimerSeq TCGA FAWG TCGA_RNA-Seq MYO7A-ZNF512 MYO7A chr11 77202424 + ZNF512 chr2 27621153 + Exonic hg38 UCS TCGA-N9-A4Q1-01A 1 10 Out-of-frame Inter-chr q13.5 p23.3 Transcription factor Seq+ 106202 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPAM-SERHL GPAM chr10 112181683 - SERHL chr22 42501625 + Exonic hg38 UCS TCGA-N9-A4Q1-01A 1 7 CDS-5'UTR Inter-chr q25.2 q13.2 106203 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB7A-GATS RAB7A chr3 128798069 + GATS chr7 100233674 - Exonic hg38 UCS TCGA-N9-A4Q1-01A 2 2 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q22.1 Seq+ 106204 ChimerSeq TCGA FAWG TCGA_RNA-Seq OLFM2-CRTC1 OLFM2 chr19 9936304 - CRTC1 chr19 18742910 + Exonic hg38 UCS TCGA-N9-A4Q3-01A 4 11 In-Frame Intra-chr p13.2 p13.11 Oncogene Seq+ 106205 ChimerSeq TCGA FAWG TCGA_RNA-Seq LSM4-RCC1 LSM4 chr19 18323018 - RCC1 chr1 28529858 + Exonic hg38 UCS TCGA-N9-A4Q3-01A 2 5 CDS-5'UTR Inter-chr p13.11 p35.3 Seq+ 106206 ChimerSeq TCGA FAWG TCGA_RNA-Seq NBAS-PQLC3 NBAS chr2 15186742 - PQLC3 chr2 11160466 + Exonic hg38 UCS TCGA-N9-A4Q3-01A 2 3 Out-of-frame Intra-chr p24.3 p25.1 Seq+ 106207 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF420-SLC37A3 ZNF420 chr19 37091121 + SLC37A3 chr7 140335504 - Exonic hg38 UCS TCGA-N9-A4Q3-01A 1 2 In-Frame Inter-chr q13.12 Transcription factor q34 106208 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELF1-FNBP4 CELF1 chr11 47482695 - FNBP4 chr11 47717512 - Exonic hg38 UCS TCGA-N9-A4Q4-01A 49 336 CDS-5'UTR Intra-chr p11.2 p11.2 Seq+ 106209 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARFGAP3-LSM10 ARFGAP3 chr22 42847514 - LSM10 chr1 36394153 - Exonic hg38 UCS TCGA-N9-A4Q4-01A 5 31 CDS-5'UTR Inter-chr q13.2 p34.3 Seq+ 106210 ChimerSeq TCGA FAWG TCGA_RNA-Seq MCTP2-RIMKLB MCTP2 chr15 94402019 + RIMKLB chr12 8782912 + Exonic hg38 UCS TCGA-N9-A4Q4-01A 3 32 CDS-5'UTR Inter-chr q26.2 p13.31 Seq+ 106211 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACROD1-PPIB MACROD1 chr11 64151239 - PPIB chr15 64162154 - Exonic hg38 UCS TCGA-N9-A4Q4-01A 1 6 Out-of-frame Inter-chr q13.1 q22.31 106212 ChimerSeq TCGA FAWG TCGA_RNA-Seq INPP5E-EDF1 INPP5E chr9 136432956 - EDF1 chr9 136863871 - Exonic hg38 UCS TCGA-N9-A4Q4-01A 1 5 Out-of-frame Intra-chr q34.3 q34.3 106213 ChimerSeq TCGA FAWG TCGA_RNA-Seq PVT1-CD36 PVT1 chr8 127890998 + CD36 chr7 80546191 + Exonic hg38 UCS TCGA-N9-A4Q7-01A 7 31 5'UTR-5'UTR Inter-chr q24.21 q21.11 Seq+ 106214 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC25A44-SYT11 SLC25A44 chr1 156194247 + SYT11 chr1 155880500 + Exonic hg38 UCS TCGA-N9-A4Q7-01A 1 5 5'UTR-CDS Intra-chr q22 q22 106215 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFP3-ARRB2 ZFP3 chr17 5078575 + ARRB2 chr17 4717217 + Exonic hg38 UCS TCGA-N9-A4Q8-01A 17 119 5'UTR-5'UTR Intra-chr p13.2 Transcription factor p13.2 Seq+ 106216 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT9-RAB37 SEPT9 chr17 77402581 + RAB37 chr17 74671079 + Exonic hg38 UCS TCGA-N9-A4Q8-01A 6 44 Out-of-frame Intra-chr q25.1 Seq+ 106217 ChimerSeq TCGA FAWG TCGA_RNA-Seq MECOM-NCEH1 MECOM chr3 169663336 - NCEH1 chr3 172645692 - Exonic hg38 UCS TCGA-N9-A4Q8-01A 3 26 In-Frame Intra-chr q26.2 Transcription factor q26.31 Seq+ 106218 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIK3R3-LRRC41 PIK3R3 chr1 46077515 - LRRC41 chr1 46286499 - Exonic hg38 UCS TCGA-N9-A4Q8-01A 2 21 Out-of-frame Intra-chr p34.1 p33 Seq+ 106219 ChimerSeq TCGA FAWG TCGA_RNA-Seq SERTAD2-BCL2L11 SERTAD2 chr2 64750281 - BCL2L11 chr2 111164133 + Exonic hg38 UCS TCGA-N9-A4Q8-01A 2 10 5'UTR-CDS Intra-chr p14 q13 Tumor suppressor gene Seq+ 106220 ChimerSeq TCGA FAWG TCGA_RNA-Seq YWHAE-SMYD4 YWHAE chr17 1400047 - SMYD4 chr17 1828006 - Exonic hg38 UCS TCGA-N9-A4Q8-01A 1 12 5'UTR-5'UTR Intra-chr p13.3 p13.3 Tumor suppressor gene 106221 ChimerSeq TCGA FAWG TCGA_RNA-Seq LDLR-ANGPTL4 LDLR chr19 11089615 + ANGPTL4 chr19 8364206 + Exonic hg38 UCS TCGA-N9-A4Q8-01A 1 7 CDS-5'UTR Intra-chr p13.2 p13.2 Tumor suppressor gene 106222 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM49B-SH3GL1 FAM49B chr8 129903312 - SH3GL1 chr19 4364120 - Exonic hg38 UCS TCGA-N9-A4Q8-01A 1 1 5'UTR-CDS Inter-chr q24.21 p13.3 106223 ChimerSeq TCGA FAWG TCGA_RNA-Seq NUP93-THADA NUP93 chr16 56758655 + THADA chr2 43232882 - Exonic hg38 UCS TCGA-NA-A4QV-01A 12 119 Out-of-frame Inter-chr q13 p21 Seq+ 106224 ChimerSeq TCGA FAWG TCGA_RNA-Seq HERPUD1-THADA HERPUD1 chr16 56936817 + THADA chr2 43430302 - Exonic hg38 UCS TCGA-NA-A4QV-01A 10 105 In-Frame Inter-chr q13 p21 Seq+ 106225 ChimerSeq TCGA FAWG TCGA_RNA-Seq CCDC157-EWSR1 CCDC157 chr22 30357132 + EWSR1 chr22 29292137 + Exonic hg38 UCS TCGA-NA-A4QV-01A 13 82 5'UTR-CDS Intra-chr q12.2 q12.2 Seq+ 106226 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZMIZ1-ADK ZMIZ1 chr10 79069270 + ADK chr10 74708321 + Exonic hg38 UCS TCGA-NA-A4QV-01A 24 38 5'UTR-5'UTR Intra-chr q22.3 q22.2 Seq+ 106227 ChimerSeq TCGA FAWG TCGA_RNA-Seq TPRN-CTDNEP1 TPRN chr9 137198987 - CTDNEP1 chr17 7244635 - Exonic hg38 UCS TCGA-NA-A4QV-01A 6 99 Out-of-frame Inter-chr q34.3 p13.1 Seq+ 106228 ChimerSeq TCGA FAWG TCGA_RNA-Seq FBXL3-ZNF76 FBXL3 chr13 77015409 - ZNF76 chr6 35291278 + Exonic hg38 UCS TCGA-NA-A4QV-01A 6 43 In-Frame Inter-chr q22.3 p21.31 Transcription factor Seq+ 106229 ChimerSeq TCGA FAWG TCGA_RNA-Seq DYRK1B-DPF1 DYRK1B chr19 39834023 - DPF1 chr19 38222708 - Exonic hg38 UCS TCGA-NA-A4QV-01A 1 47 5'UTR-CDS Intra-chr CMGC:DYRK q13.2 Transcription factor Seq+ 106230 ChimerSeq TCGA FAWG TCGA_RNA-Seq DIP2C-RTKN2 DIP2C chr10 288364 - RTKN2 chr10 62199861 - Exonic hg38 UCS TCGA-NA-A4QV-01A 5 21 Out-of-frame Intra-chr p15.3 q21.2 Seq+ 106231 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL27A1-C9orf43 COL27A1 chr9 114290917 + C9orf43 chr9 113419108 + Exonic hg38 UCS TCGA-NA-A4QV-01A 5 10 Out-of-frame Intra-chr q32 q32 Seq+ 106232 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGF-CALM2 PIGF chr2 46612228 - CALM2 chr2 47172459 - Exonic hg38 UCS TCGA-NA-A4QV-01A 3 15 In-Frame Intra-chr p21 p21 Seq+ 106233 ChimerSeq TCGA FAWG TCGA_RNA-Seq SARNP-MMP19 SARNP chr12 55817666 - MMP19 chr12 55842438 - Exonic hg38 UCS TCGA-NA-A4QV-01A 5 6 In-Frame Intra-chr q13.2 q13.2 Seq+ 106234 ChimerSeq TCGA FAWG TCGA_RNA-Seq MED20-CCND3 MED20 chr6 41916785 - CCND3 chr6 41940585 - Exonic hg38 UCS TCGA-NA-A4QV-01A 1 18 Out-of-frame Intra-chr p21.1 p21.1 Seq+ 106235 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAPK10-PTPN13 MAPK10 chr4 86354530 - PTPN13 chr4 86758260 + Exonic hg38 UCS TCGA-NA-A4QV-01A 3 7 5'UTR-CDS Intra-chr q21.3 Tumor suppressor gene q21.3 Tumor suppressor gene Seq+ 106236 ChimerSeq TCGA FAWG TCGA_RNA-Seq COL1A2-FSTL1 COL1A2 chr7 94425663 + FSTL1 chr3 120416027 - Exonic hg38 UCS TCGA-NA-A4QV-01A 1 9 In-Frame Inter-chr q21.3 q13.33 106237 ChimerSeq TCGA FAWG TCGA_RNA-Seq PIGF-C2orf61 PIGF chr2 46612228 - C2orf61 chr2 47170764 - Exonic hg38 UCS TCGA-NA-A4QV-01A 1 7 Out-of-frame Intra-chr p21 106238 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF529-RYR1 ZNF529 chr19 36589615 - RYR1 chr19 38561113 + Exonic hg38 UCS TCGA-NA-A4QV-01A 1000 1000 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.2 106239 ChimerSeq TCGA FAWG TCGA_RNA-Seq CNOT8-OPRPN CNOT8 chr5 154865385 + OPRPN chr4 70409380 + Exonic hg38 UCS TCGA-NA-A4QW-01A 23 116 In-Frame Inter-chr q33.2 q13.3 106240 ChimerSeq TCGA FAWG TCGA_RNA-Seq XRN1-GAPLINC XRN1 chr3 142397329 - GAPLINC chr18 3478756 + Exonic hg38 UCS TCGA-NA-A4QW-01A 13 91 CDS-5'UTR Inter-chr q23 p11.31 106241 ChimerSeq TCGA FAWG TCGA_RNA-Seq CLCN5-NBDY CLCN5 chrX 50042462 + NBDY chrX 56817320 + Exonic hg38 UCS TCGA-NA-A4QW-01A 3 38 CDS-3'UTR Intra-chr p11.23 p11.21 106242 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZFPM2-OXR1 ZFPM2 chr8 105444381 + OXR1 chr8 106359476 + Exonic hg38 UCS TCGA-NA-A4QW-01A 4 19 5'UTR-5'UTR Intra-chr q22.3 Transcription factor q23.1 Seq+ 106243 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADAMTS9-PRICKLE2 ADAMTS9 chr3 64631455 - PRICKLE2 chr3 64099925 - Exonic hg38 UCS TCGA-NA-A4QW-01A 1 14 In-Frame Intra-chr p14.1 Tumor suppressor gene p14.1 106244 ChimerSeq TCGA FAWG TCGA_RNA-Seq SNHG16-ANKDD1A SNHG16 chr17 76559043 + ANKDD1A chr15 64926066 + Exonic hg38 UCS TCGA-NA-A4QW-01A 1 9 5'UTR-CDS Inter-chr q25.1 q22.31 106245 ChimerSeq TCGA FAWG TCGA_RNA-Seq DUSP22-TP53TG3 DUSP22 chr6 311962 + TP53TG3 chr16 32675065 - Exonic hg38 UCS TCGA-NA-A4QW-01A 1 6 CDS-3'UTR Inter-chr p25.3 Tumor suppressor gene p11.2 106246 ChimerSeq TCGA FAWG TCGA_RNA-Seq EGLN2-CYP2G2P EGLN2 chr19 40801415 + CYP2G2P chr19 41056866 - Exonic hg38 UCS TCGA-NA-A4QX-01A 32 189 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 106247 ChimerSeq TCGA FAWG TCGA_RNA-Seq MTOR-MAD2L2 MTOR chr1 11167442 - MAD2L2 chr1 11680613 - Exonic hg38 UCS TCGA-NA-A4QX-01A 13 75 CDS-5'UTR Intra-chr p36.22 Oncogene p36.22 Seq+ 106248 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF566-ZNF507 ZNF566 chr19 36472911 - ZNF507 chr19 32360504 + Exonic hg38 UCS TCGA-NA-A4QX-01A 11 27 In-Frame Intra-chr q13.12 Transcription factor q13.11 Transcription factor 106249 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHC3-NFKBIL1 PHC3 chr3 170171373 - NFKBIL1 chr6 31548163 + Exonic hg38 UCS TCGA-NA-A4QX-01A 8 27 CDS-3'UTR Inter-chr q26.2 Tumor suppressor gene Seq+ 106250 ChimerSeq TCGA FAWG TCGA_RNA-Seq EID2-TDRD12 EID2 chr19 39540002 - TDRD12 chr19 32731725 + Exonic hg38 UCS TCGA-NA-A4QX-01A 3 7 In-Frame Intra-chr q13.2 q13.11 Seq+ 106251 ChimerSeq TCGA FAWG TCGA_RNA-Seq MPPED1-SCFD2 MPPED1 chr22 43474961 + SCFD2 chr4 52874061 - Exonic hg38 UCS TCGA-NA-A4QY-01A 27 86 Out-of-frame Inter-chr q13.2 q12 Seq+ 106252 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF185-1 RNF185 chr22 31160303 + 1 chr4 1403815 - Exonic hg38 UCS TCGA-NA-A4QY-01A 3 24 5'UTR-5'UTR Inter-chr q12.2 106253 ChimerSeq TCGA FAWG TCGA_RNA-Seq PPP1R13B-ADAM18 PPP1R13B chr14 103847299 - ADAM18 chr8 39606307 + Exonic hg38 UCS TCGA-NA-A4QY-01A 3 7 CDS-3'UTR Inter-chr q32.33 Seq+ 106254 ChimerSeq TCGA FAWG TCGA_RNA-Seq BCR-HIC2 BCR chr22 23182239 + HIC2 chr22 21442759 + Exonic hg38 UCS TCGA-NA-A4QY-01A 1 2 CDS-5'UTR Intra-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q11.21 Transcription factor Seq+ 106255 ChimerSeq TCGA FAWG TCGA_RNA-Seq DVL1-OPTN DVL1 chr1 1348896 - OPTN chr10 13112453 + Exonic hg38 UCS TCGA-NA-A4R0-01A 9 36 Out-of-frame Inter-chr p36.33 p13 Seq+ 106256 ChimerSeq TCGA FAWG TCGA_RNA-Seq ABHD14B-POC1A ABHD14B chr3 51973965 - POC1A chr3 52096712 - Exonic hg38 UCS TCGA-NA-A4R0-01A 2 48 Out-of-frame Intra-chr p21.2 p21.2 Seq+ 106257 ChimerSeq TCGA FAWG TCGA_RNA-Seq GNB1-CDK11B GNB1 chr1 1890820 - CDK11B chr1 1657498 - Exonic hg38 UCS TCGA-NA-A4R0-01A 8 18 5'UTR-5'UTR Intra-chr p36.33 p36.33 Seq+ 106258 ChimerSeq TCGA FAWG TCGA_RNA-Seq ATAD3C-HSPA14 ATAD3C chr1 1459231 + HSPA14 chr10 14867083 + Exonic hg38 UCS TCGA-NA-A4R0-01A 3 37 Out-of-frame Inter-chr p36.33 p13 Seq+ 106259 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDLIM5-CCSER1 PDLIM5 chr4 94455384 + CCSER1 chr4 91598572 + Exonic hg38 UCS TCGA-NA-A4R0-01A 1 11 In-Frame Intra-chr q22.3 q22.1 Seq+ 106260 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEC23B-DZANK1 SEC23B chr20 18543172 + DZANK1 chr20 18433765 - Exonic hg38 UCS TCGA-NA-A4R0-01A 2 5 In-Frame Intra-chr p11.23 p11.23 Seq+ 106261 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTAN1-SGTA SPTAN1 chr9 128552696 + SGTA chr19 2761522 - Exonic hg38 UCS TCGA-NA-A4R1-01A 25 174 5'UTR-CDS Inter-chr q34.11 p13.3 Seq+ 106262 ChimerSeq TCGA FAWG TCGA_RNA-Seq WASF2-FGR WASF2 chr1 27489986 - FGR chr1 27625151 - Exonic hg38 UCS TCGA-NA-A4R1-01A 16 149 5'UTR-5'UTR Intra-chr p36.11 p35.3 TK:Src Seq+ 106263 ChimerSeq TCGA FAWG TCGA_RNA-Seq ARHGEF11-ETV3L ARHGEF11 chr1 157044299 - ETV3L chr1 157099556 - Exonic hg38 UCS TCGA-NA-A4R1-01A 27 104 CDS-5'UTR Intra-chr q23.1 q23.1 Transcription factor Seq+ 106264 ChimerSeq TCGA FAWG TCGA_RNA-Seq BTBD2-GTSE1 BTBD2 chr19 1987166 - GTSE1 chr22 46323190 + Exonic hg38 UCS TCGA-NA-A4R1-01A 16 73 Out-of-frame Inter-chr p13.3 q13.31 Seq+ 106265 ChimerSeq TCGA FAWG TCGA_RNA-Seq PMM1-SHISA8 PMM1 chr22 41583959 - SHISA8 chr22 41910147 - Exonic hg38 UCS TCGA-NA-A4R1-01A 18 57 Out-of-frame Intra-chr q13.2 q13.2 106266 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAPGEF1-MED27 RAPGEF1 chr9 131596298 - MED27 chr9 131884099 - Exonic hg38 UCS TCGA-NA-A4R1-01A 5 80 Out-of-frame Intra-chr q34.13 q34.13 Seq+ 106267 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBC1D22A-AP3D1 TBC1D22A chr22 47037198 + AP3D1 chr19 2102268 - Exonic hg38 UCS TCGA-NA-A4R1-01A 4 51 In-Frame Inter-chr q13.31 p13.3 Seq+ 106268 ChimerSeq TCGA FAWG TCGA_RNA-Seq CRTC3-MESP2 CRTC3 chr15 90638815 + MESP2 chr15 89778065 + Exonic hg38 UCS TCGA-NA-A4R1-01A 2 37 In-Frame Intra-chr q26.1 q26.1 Transcription factor Seq+ 106269 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIAA1549-C7orf66 KIAA1549 chr7 138861139 - C7orf66 chr7 108884584 - Exonic hg38 UCS TCGA-NA-A4R1-01A 5 21 CDS-5'UTR Intra-chr q34 q31.1 Seq+ 106270 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM65A-ZP3 FAM65A chr16 67544151 + ZP3 chr7 76432984 + Exonic hg38 UCS TCGA-NA-A4R1-01A 3 26 Out-of-frame Inter-chr q11.23 Seq+ 106271 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF813-FPR3 ZNF813 chr19 53467789 + FPR3 chr19 51823739 + Exonic hg38 UCS TCGA-NA-A4R1-01A 5 4 5'UTR-5'UTR Intra-chr q13.42 Transcription factor q13.41 Seq+ 106272 ChimerSeq TCGA FAWG TCGA_RNA-Seq SUMO2-ACOX1 SUMO2 chr17 75182814 - ACOX1 chr17 75978693 - Exonic hg38 UCS TCGA-NA-A4R1-01A 1 17 Out-of-frame Intra-chr q25.1 q25.1 106273 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF1B-HAGH KIF1B chr1 10368538 + HAGH chr16 1823037 - Exonic hg38 UCS TCGA-NA-A4R1-01A 2 12 Out-of-frame Inter-chr p36.22 Tumor suppressor gene p13.3 Seq+ 106274 ChimerSeq TCGA FAWG TCGA_RNA-Seq CUX2-IFT81 CUX2 chr12 111034240 + IFT81 chr12 110127360 + Exonic hg38 UCS TCGA-NA-A4R1-01A 3 6 CDS-5'UTR Intra-chr q24.11 Transcription factor q24.11 Seq+ 106275 ChimerSeq TCGA FAWG TCGA_RNA-Seq STXBP1-RALGPS1 STXBP1 chr9 127661205 + RALGPS1 chr9 127166069 + Exonic hg38 UCS TCGA-NA-A4R1-01A 1 10 Out-of-frame Intra-chr q34.11 q33.3 106276 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZDHHC1-KCTD19 ZDHHC1 chr16 67416171 - KCTD19 chr16 67303337 - Exonic hg38 UCS TCGA-NA-A4R1-01A 2 5 5'UTR-CDS Intra-chr q22.1 q22.1 Seq+ 106277 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM185A-CXorf40B TMEM185A chrX 149631543 - CXorf40B chrX 149937480 - Exonic hg38 UCS TCGA-NA-A4R1-01A 1 4 CDS-5'UTR Intra-chr q28 q28 106278 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD81-ARMC3 CD81 chr11 2377615 + ARMC3 chr10 23032861 + Exonic hg38 UCS TCGA-NA-A5I1-01A 15 108 Out-of-frame Inter-chr p15.5 p12.2 Seq+ 106279 ChimerSeq TCGA FAWG TCGA_RNA-Seq LRP1-SLC39A5 LRP1 chr12 57129031 + SLC39A5 chr12 56231204 + Exonic hg38 UCS TCGA-NA-A5I1-01A 12 90 CDS-5'UTR Intra-chr q13.3 q13.3 Seq+ 106280 ChimerSeq TCGA FAWG TCGA_RNA-Seq USP37-NHEJ1 USP37 chr2 218562673 - NHEJ1 chr2 219078206 - Exonic hg38 UCS TCGA-NA-A5I1-01A 11 78 5'UTR-CDS Intra-chr q35 q35 Seq+ 106281 ChimerSeq TCGA FAWG TCGA_RNA-Seq CMB9-B4GALNT4 CMB9 chr11 780381 + B4GALNT4 chr11 379866 + Exonic hg38 UCS TCGA-NA-A5I1-01A 15 45 Out-of-frame Intra-chr p15.5 106282 ChimerSeq TCGA FAWG TCGA_RNA-Seq NPEPPS-CREB3L1 NPEPPS chr17 47545993 + CREB3L1 chr11 46320264 + Exonic hg38 UCS TCGA-NA-A5I1-01A 13 20 In-Frame Inter-chr q21.32 p11.2 Tumor suppressor gene Transcription factor Seq+ 106283 ChimerSeq TCGA FAWG TCGA_RNA-Seq DNMT3B-COMMD7 DNMT3B chr20 32781414 + COMMD7 chr20 32728142 - Exonic hg38 UCS TCGA-NA-A5I1-01A 6 46 In-Frame Intra-chr q11.21 Tumor suppressor gene q11.21 Seq+ 106284 ChimerSeq TCGA FAWG TCGA_RNA-Seq SOS2-POLN SOS2 chr14 50231197 - POLN chr4 2174751 - Exonic hg38 UCS TCGA-NA-A5I1-01A 4 32 In-Frame Inter-chr q21.3 p16.3 Seq+ 106285 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF213-PPP1R27 RNF213 chr17 80340356 + PPP1R27 chr17 81834833 - Exonic hg38 UCS TCGA-NA-A5I1-01A 5 27 Out-of-frame Intra-chr q25.3 Oncogene q25.3 Seq+ 106286 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTCF-PSKH1 CTCF chr16 67571264 + PSKH1 chr16 67908680 + Exonic hg38 UCS TCGA-NA-A5I1-01A 2 26 5'UTR-5'UTR Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 CAMK:PSK Seq+ 106287 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNF213-UVSSA RNF213 chr17 80334270 + UVSSA chr4 1351715 + Exonic hg38 UCS TCGA-NA-A5I1-01A 3 2 Out-of-frame Inter-chr q25.3 Oncogene p16.3 Seq+ 106288 ChimerSeq TCGA FAWG TCGA_RNA-Seq PACS1-PPP2R5B PACS1 chr11 66070842 + PPP2R5B chr11 64925848 + Exonic hg38 UCS TCGA-NA-A5I1-01A 1 9 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 106289 ChimerSeq TCGA FAWG TCGA_RNA-Seq PDCD10-HSF1 PDCD10 chr3 167734806 - HSF1 chr8 144313846 + Exonic hg38 UCS TCGA-NA-A5I1-01A 2 4 5'UTR-3'UTR Inter-chr q26.1 q24.3 Transcription factor Seq+ 106290 ChimerSeq TCGA FAWG TCGA_RNA-Seq AMD1-FIG4 AMD1 chr6 110875215 + FIG4 chr6 109825088 + Exonic hg38 UCS TCGA-NA-A5I1-01A 1000 1000 In-Frame Intra-chr q21 q21 Seq+ 106291 ChimerSeq TCGA FAWG TCGA_RNA-Seq PRX-IGF2 PRX chr19 40397333 - IGF2 chr11 2129494 - Exonic hg38 UCS TCGA-NA-A5I1-01A 1000 1000 Out-of-frame Inter-chr q13.2 p15.5 Oncogene 106292 ChimerSeq TCGA FAWG TCGA_RNA-Seq C2CD2-SH3BGRL C2CD2 chr21 41942147 - SH3BGRL chrX 81276984 + Exonic hg38 UCS TCGA-ND-A4W6-01A 2 14 In-Frame Inter-chr q22.3 q21.1 Seq+ 106293 ChimerSeq TCGA FAWG TCGA_RNA-Seq HLCS-ATP5O HLCS chr21 36962036 - ATP5O chr21 33915977 - Exonic hg38 UCS TCGA-ND-A4W6-01A 3 8 Out-of-frame Intra-chr q22.13 q22.11 Seq+ 106294 ChimerSeq TCGA FAWG TCGA_RNA-Seq TOM1L2-GALK1 TOM1L2 chr17 17972262 - GALK1 chr17 75751737 - Exonic hg38 UCS TCGA-ND-A4W6-01A 2 12 CDS-3'UTR Intra-chr p11.2 Tumor suppressor gene q25.1 Seq+ 106295 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELK1-PCBP3 ELK1 chrX 47650423 - PCBP3 chr21 45849961 + Exonic hg38 UCS TCGA-ND-A4W6-01A 2 4 5'UTR-5'UTR Inter-chr p11.23 Transcription factor q22.3 Seq+ 106296 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARP8-FAM159B PARP8 chr5 50763242 + FAM159B chr5 64695507 + Exonic hg38 UCS TCGA-ND-A4W6-01A 1 5 Out-of-frame Intra-chr q11.1 q12.3 Seq+ 106297 ChimerSeq TCGA FAWG TCGA_RNA-Seq NRG1-PMEPA1 NRG1 chr8 31640729 + PMEPA1 chr20 57659697 - Exonic hg38 UCS TCGA-ND-A4WA-01A 6 23 In-Frame Inter-chr p12 q13.31 Seq+ 106298 ChimerSeq TCGA FAWG TCGA_RNA-Seq PMS2P1-CLIP2 PMS2P1 chr7 100328836 - CLIP2 chr7 74375887 + Exonic hg38 UCS TCGA-ND-A4WA-01A 4 17 3'UTR-CDS Intra-chr q22.1 q11.23 106299 ChimerSeq TCGA FAWG TCGA_RNA-Seq RPL11-PNRC2 RPL11 chr1 23693913 + PNRC2 chr1 23960929 + Exonic hg38 UCS TCGA-ND-A4WC-01A 1 1 CDS-5'UTR Intra-chr p36.11 Tumor suppressor gene p36.11 106300 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGF2BP2-IFITM2 IGF2BP2 chr3 185823153 - IFITM2 chr11 308231 + Exonic hg38 UCS TCGA-ND-A4WF-01A 39 163 Out-of-frame Inter-chr q27.2 p15.5 Seq+ 106301 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRA2B-P3H2 TRA2B chr3 185937825 - P3H2 chr3 189964098 - Exonic hg38 UCS TCGA-ND-A4WF-01A 10 103 In-Frame Intra-chr q27.2 q28 106302 ChimerSeq TCGA FAWG TCGA_RNA-Seq EYA2-MYLK2 EYA2 chr20 47097168 + MYLK2 chr20 31830819 + Exonic hg38 UCS TCGA-ND-A4WF-01A 19 66 In-Frame Intra-chr q13.12 q11.21 Seq+ 106303 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB40C-HBZ RAB40C chr16 590433 + HBZ chr16 152893 + Exonic hg38 UCS TCGA-ND-A4WF-01A 10 90 CDS-5'UTR Intra-chr p13.3 p13.3 Seq+ 106304 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPOP-EPHX2 SPOP chr17 49677933 - EPHX2 chr8 27500926 + Exonic hg38 UCS TCGA-ND-A4WF-01A 6 25 5'UTR-CDS Inter-chr q21.33 Oncogene Tumor suppressor gene p21.2 Seq+ 106305 ChimerSeq TCGA FAWG TCGA_RNA-Seq TRABD2B-PSMD13 TRABD2B chr1 47994034 - PSMD13 chr11 244041 + Exonic hg38 UCS TCGA-ND-A4WF-01A 6 22 In-Frame Inter-chr p33 p15.5 Seq+ 106306 ChimerSeq TCGA FAWG TCGA_RNA-Seq RAB40C-HBM RAB40C chr16 590433 + HBM chr16 164482 + Exonic hg38 UCS TCGA-ND-A4WF-01A 1 36 CDS-5'UTR Intra-chr p13.3 p13.3 106307 ChimerSeq TCGA FAWG TCGA_RNA-Seq CTNNB1-IGF2BP2 CTNNB1 chr3 41199670 + IGF2BP2 chr3 185698347 - Exonic hg38 UCS TCGA-ND-A4WF-01A 3 23 5'UTR-5'UTR Intra-chr p22.1 Oncogene q27.2 Seq+ 106308 ChimerSeq TCGA FAWG TCGA_RNA-Seq RASSF8-ST8SIA1 RASSF8 chr12 25959148 + ST8SIA1 chr12 22202038 - Exonic hg38 UCS TCGA-ND-A4WF-01A 3 13 5'UTR-CDS Intra-chr p12.1 Tumor suppressor gene p12.1 Seq+ 106309 ChimerSeq TCGA FAWG TCGA_RNA-Seq ELAVL1-ATXN10 ELAVL1 chr19 7973725 - ATXN10 chr22 45842991 + Exonic hg38 UCS TCGA-ND-A4WF-01A 2 8 In-Frame Inter-chr p13.2 q13.31 Seq+ 106310 ChimerSeq TCGA FAWG TCGA_RNA-Seq ADCK5-CPSF1 ADCK5 chr8 144383230 + CPSF1 chr8 144394160 - Exonic hg38 UCS TCGA-ND-A4WF-01A 2 7 3'UTR-5'UTR Intra-chr q24.3 Atypical:ABC1 q24.3 Seq+ 106311 ChimerSeq TCGA FAWG TCGA_RNA-Seq FOXM1-ANO2 FOXM1 chr12 2864320 - ANO2 chr12 5532114 - Exonic hg38 UCS TCGA-ND-A4WF-01A 2 7 CDS-3'UTR Intra-chr p13.33 Transcription factor p13.31 Seq+ 106312 ChimerSeq TCGA FAWG TCGA_RNA-Seq NEDD9-SCT NEDD9 chr6 11382139 - SCT chr11 626989 - Exonic hg38 UCS TCGA-ND-A4WF-01A 1 9 5'UTR-5'UTR Inter-chr p24.2 106313 ChimerSeq TCGA FAWG TCGA_RNA-Seq IGF2BP2-IFITM1 IGF2BP2 chr3 185823153 - IFITM1 chr11 314164 + Exonic hg38 UCS TCGA-ND-A4WF-01A 1 5 CDS-5'UTR Inter-chr q27.2 p15.5 Oncogene 106314 ChimerSeq TCGA FAWG TCGA_RNA-Seq WNK2-CENPP WNK2 chr9 93308584 + CENPP chr9 92611314 + Exonic hg38 UCS TCGA-NF-A4WU-01A 1 13 In-Frame Intra-chr q22.31 Tumor suppressor gene q22.31 Seq+ 106315 ChimerSeq TCGA FAWG TCGA_RNA-Seq SP1-WNT9B SP1 chr12 53383622 + WNT9B chr17 46872517 + Exonic hg38 UCS TCGA-NF-A4WU-01A 1 4 CDS-3'UTR Inter-chr q13.13 Transcription factor Seq+ 106316 ChimerSeq TCGA FAWG TCGA_RNA-Seq NIPBL-SPEF2 NIPBL chr5 36877178 + SPEF2 chr5 35799968 + Exonic hg38 UCS TCGA-NF-A4WX-01A 32 179 5'UTR-CDS Intra-chr p13.2 p13.2 Seq+ 106317 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC27A1-KIAA0391 SLC27A1 chr19 17489117 + KIAA0391 chr14 35266727 + Exonic hg38 UCS TCGA-NF-A4WX-01A 8 46 Out-of-frame Inter-chr p13.11 q13.2 Seq+ 106318 ChimerSeq TCGA FAWG TCGA_RNA-Seq GPR137-RARRES3 GPR137 chr11 64289142 + RARRES3 chr11 63546149 + Exonic hg38 UCS TCGA-NF-A4WX-01A 6 44 Out-of-frame Intra-chr q13.1 q12.3 Tumor suppressor gene Seq+ 106319 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM131-PLA2G6 TMEM131 chr2 97792386 - PLA2G6 chr22 38135084 - Exonic hg38 UCS TCGA-NF-A4WX-01A 7 32 Out-of-frame Inter-chr q11.2 q13.1 Seq+ 106320 ChimerSeq TCGA FAWG TCGA_RNA-Seq SF3A3-HPCAL4 SF3A3 chr1 37960120 - HPCAL4 chr1 39684611 - Exonic hg38 UCS TCGA-NF-A4WX-01A 7 30 CDS-5'UTR Intra-chr p34.3 p34.2 Seq+ 106321 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNQ1-LSP1 KCNQ1 chr11 2445484 + LSP1 chr11 1880087 + Exonic hg38 UCS TCGA-NF-A4WX-01A 6 19 3'UTR-CDS Intra-chr p15.5 p15.5 Seq+ 106322 ChimerSeq TCGA FAWG TCGA_RNA-Seq EIF2S2P4-PIGU EIF2S2P4 chr2 170752469 + PIGU chr20 34588607 - Exonic hg38 UCS TCGA-NF-A4WX-01A 4 22 Out-of-frame Inter-chr q31.1 q11.22 Seq+ 106323 ChimerSeq TCGA FAWG TCGA_RNA-Seq CHEK2-THOC5 CHEK2 chr22 28689135 - THOC5 chr22 29536738 - Exonic hg38 UCS TCGA-NF-A4WX-01A 6 8 Out-of-frame Intra-chr q12.1 Oncogene Tumor suppressor gene q12.2 Seq+ 106324 ChimerSeq TCGA FAWG TCGA_RNA-Seq KCNQ1-MIR7847 KCNQ1 chr11 2445484 + MIR7847 chr11 1880087 + Exonic hg38 UCS TCGA-NF-A4WX-01A 6 7 3'UTR-5'UTR Intra-chr p15.5 p15.5 106325 ChimerSeq TCGA FAWG TCGA_RNA-Seq SPTLC1-IARS SPTLC1 chr9 92067966 - IARS chr9 92245071 - Exonic hg38 UCS TCGA-NF-A4WX-01A 2 10 Out-of-frame Intra-chr q22.31 q22.31 Seq+ 106326 ChimerSeq TCGA FAWG TCGA_RNA-Seq CELF1-RAPSN CELF1 chr11 47552992 - RAPSN chr11 47442814 - Exonic hg38 UCS TCGA-NF-A4X2-01A 1 28 5'UTR-CDS Intra-chr p11.2 p11.2 106327 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2G1-PPIL2 UBE2G1 chr17 4366271 - PPIL2 chr22 21669913 + Exonic hg38 UCS TCGA-NF-A5CP-01A 9 52 Out-of-frame Inter-chr p13.2 q11.21 Seq+ 106328 ChimerSeq TCGA FAWG TCGA_RNA-Seq UBE2G1-MIR130B UBE2G1 chr17 4366271 - MIR130B chr22 21669913 + Exonic hg38 UCS TCGA-NF-A5CP-01A 9 9 CDS-3'UTR Inter-chr p13.2 q11.21 106329 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF423-NCEH1 ZNF423 chr16 49789487 - NCEH1 chr3 172634092 - Exonic hg38 UCS TCGA-NF-A5CP-01A 6 13 Out-of-frame Inter-chr q12.1 Transcription factor q26.31 Seq+ 106330 ChimerSeq TCGA FAWG TCGA_RNA-Seq EP400-TRIM29 EP400 chr12 132077574 + TRIM29 chr11 120118321 - Exonic hg38 UCS TCGA-NF-A5CP-01A 4 16 Out-of-frame Inter-chr q24.33 Oncogene q23.3 Seq+ 106331 ChimerSeq TCGA FAWG TCGA_RNA-Seq POM121C-HIP1 POM121C chr7 75437515 - HIP1 chr7 75599247 - Exonic hg38 UCS TCGA-NF-A5CP-01A 2 9 In-Frame Intra-chr q11.23 q11.23 Seq+ 106332 ChimerSeq TCGA FAWG TCGA_RNA-Seq ANK3-MCU ANK3 chr10 60615186 - MCU chr10 72834359 + Exonic hg38 UCS TCGA-NF-A5CP-01A 1 8 In-Frame Intra-chr q21.2 q22.1 Seq+ 106333 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF423-TNFSF10 ZNF423 chr16 49855735 - TNFSF10 chr3 172514998 - Exonic hg38 UCS TCGA-NF-A5CP-01A 1 7 5'UTR-CDS Inter-chr q12.1 Transcription factor q26.31 106334 ChimerSeq TCGA FAWG TCGA_RNA-Seq CD44-CAPRIN1 CD44 chr11 35139370 + CAPRIN1 chr11 34089395 + Exonic hg38 UCS TCGA-NG-A4VU-01A 46 290 In-Frame Intra-chr p13 Oncogene Tumor suppressor gene p13 Seq+ 106335 ChimerSeq TCGA FAWG TCGA_RNA-Seq PON2-TYW1B PON2 chr7 95424515 - TYW1B chr7 72575719 - Exonic hg38 UCS TCGA-NG-A4VU-01A 2 65 Out-of-frame Intra-chr q21.3 q11.23 Seq+ 106336 ChimerSeq TCGA FAWG TCGA_RNA-Seq INTS11-CCNL2 INTS11 chr1 1314824 - CCNL2 chr1 1393460 - Exonic hg38 UCS TCGA-NG-A4VU-01A 1 18 In-Frame Intra-chr p36.33 p36.33 106337 ChimerSeq TCGA FAWG TCGA_RNA-Seq FRAS1-ART3 FRAS1 chr4 78066016 + ART3 chr4 76112386 + Exonic hg38 UCS TCGA-NG-A4VU-01A 2 13 Out-of-frame Intra-chr q21.21 q21.1 Seq+ 106338 ChimerSeq TCGA FAWG TCGA_RNA-Seq GARNL3-RALGPS1 GARNL3 chr9 127291242 + RALGPS1 chr9 127174715 + Exonic hg38 UCS TCGA-NG-A4VU-01A 1 9 Out-of-frame Intra-chr q33.3 q33.3 Seq+ 106339 ChimerSeq TCGA FAWG TCGA_RNA-Seq TBCD-CSNK1D TBCD chr17 82752377 + CSNK1D chr17 82265796 - Exonic hg38 UVM TCGA-V4-A9EA-01A 2 1 5'UTR-CDS Intra-chr q25.3 Seq+ 106340 ChimerSeq TCGA FAWG TCGA_RNA-Seq PARD3B-SLC40A1 PARD3B chr2 204546171 + SLC40A1 chr2 189583420 - Exonic hg38 UVM TCGA-V4-A9EK-01A 1 4 Out-of-frame Intra-chr q33.3 q32.2 Seq+ 106341 ChimerSeq TCGA FAWG TCGA_RNA-Seq RFC1-SMIM14 RFC1 chr4 39366239 - SMIM14 chr4 39572463 - Exonic hg38 UVM TCGA-V4-A9EX-01A 3 22 In-Frame Intra-chr p14 p14 Seq+ 106342 ChimerSeq TCGA FAWG TCGA_RNA-Seq OCIAD1-KIT OCIAD1 chr4 48857365 + KIT chr4 54723584 + Exonic hg38 UVM TCGA-V4-A9F7-01A 17 51 In-Frame Intra-chr p11 q12 TK:PDGFR Oncogene Seq+ 106343 ChimerSeq TCGA FAWG TCGA_RNA-Seq CAPN3-SSU72 CAPN3 chr15 42409995 + SSU72 chr1 1545002 - Exonic hg38 UVM TCGA-V4-A9F7-01A 2 1 Out-of-frame Inter-chr q15.1 p36.33 Seq+ 106344 ChimerSeq TCGA FAWG TCGA_RNA-Seq GUCD1-MB GUCD1 chr22 24554949 - MB chr22 35607443 - Exonic hg38 UVM TCGA-VD-A8KE-01A 1 7 Out-of-frame Intra-chr q11.23 q12.3 106345 ChimerSeq TCGA FAWG TCGA_RNA-Seq SFT2D1-FAM46A SFT2D1 chr6 166342419 - FAM46A chr6 81495113 - Exonic hg38 UVM TCGA-VD-A8KJ-01A 275 670 Out-of-frame Intra-chr q27 q14.1 Seq+ 106346 ChimerSeq TCGA FAWG TCGA_RNA-Seq STX7-LMBRD1 STX7 chr6 132503446 - LMBRD1 chr6 69676541 - Exonic hg38 UVM TCGA-VD-A8KJ-01A 147 1079 In-Frame Intra-chr q23.2 q13 Seq+ 106347 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM200A-FYN TMEM200A chr6 130366524 + FYN chr6 111780635 - Exonic hg38 UVM TCGA-VD-A8KJ-01A 17 45 5'UTR-5'UTR Intra-chr q23.1 q21 TK:Src Seq+ 106348 ChimerSeq TCGA FAWG TCGA_RNA-Seq PHF3-QKI PHF3 chr6 63636150 + QKI chr6 163561982 + Exonic hg38 UVM TCGA-VD-A8KJ-01A 9 25 5'UTR-CDS Intra-chr q12 q26 Seq+ 106349 ChimerSeq TCGA FAWG TCGA_RNA-Seq WTAP-MAS1 WTAP chr6 159727333 + MAS1 chr6 159906920 + Exonic hg38 UVM TCGA-VD-A8KJ-01A 10 20 5'UTR-5'UTR Intra-chr q25.3 q25.3 Seq+ 106350 ChimerSeq TCGA FAWG TCGA_RNA-Seq FYN-CDK19 FYN chr6 111780566 - CDK19 chr6 110614666 - Exonic hg38 UVM TCGA-VD-A8KJ-01A 10 16 5'UTR-CDS Intra-chr q21 TK:Src q21 Seq+ 106351 ChimerSeq TCGA FAWG TCGA_RNA-Seq SLC18B1-TRMT11 SLC18B1 chr6 132796982 - TRMT11 chr6 126021160 + Exonic hg38 UVM TCGA-VD-A8KJ-01A 5 26 Out-of-frame Intra-chr q23.2 q22.32 Seq+ 106352 ChimerSeq TCGA FAWG TCGA_RNA-Seq MAP3K5-OSTM1 MAP3K5 chr6 136791710 - OSTM1 chr6 108064299 - Exonic hg38 UVM TCGA-VD-A8KJ-01A 6 16 Out-of-frame Intra-chr q23.3 STE:STE11 q21 Seq+ 106353 ChimerSeq TCGA FAWG TCGA_RNA-Seq SAMD3-GRIK2 SAMD3 chr6 130365120 - GRIK2 chr6 102035341 + Exonic hg38 UVM TCGA-VD-A8KJ-01A 2 8 5'UTR-CDS Intra-chr q23.1 q16.3 Seq+ 106354 ChimerSeq TCGA FAWG TCGA_RNA-Seq RNGTT-TBC1D32 RNGTT chr6 88678353 - TBC1D32 chr6 121321794 - Exonic hg38 UVM TCGA-VD-A8KJ-01A 2 4 Out-of-frame Intra-chr q15 q22.31 Seq+ 106355 ChimerSeq TCGA FAWG TCGA_RNA-Seq KIF13B-FUT10 KIF13B chr8 29245346 - FUT10 chr8 33372804 - Exonic hg38 UVM TCGA-VD-A8KM-01A 2 14 Out-of-frame Intra-chr p12 p12 Seq+ 106356 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMEM259-PRSS57 TMEM259 chr19 1020772 - PRSS57 chr19 694970 - Exonic hg38 UVM TCGA-VD-A8KM-01A 1 1 Out-of-frame Intra-chr p13.3 p13.3 106357 ChimerSeq TCGA FAWG TCGA_RNA-Seq MACROD1-PARP1 MACROD1 chr11 64151239 - PARP1 chr1 226402379 - Exonic hg38 UVM TCGA-VD-A8KO-01A 4 4 Out-of-frame Inter-chr q13.1 q42.12 Oncogene Tumor suppressor gene Seq+ 106358 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF266-MATK ZNF266 chr19 9434798 - MATK chr19 3784033 - Exonic hg38 UVM TCGA-VD-AA8M-01A 6 36 5'UTR-CDS Intra-chr p13.2 Transcription factor p13.3 Seq+ 106359 ChimerSeq TCGA FAWG TCGA_RNA-Seq ZNF440-ECSIT ZNF440 chr19 11814450 + ECSIT chr19 11508048 - Exonic hg38 UVM TCGA-VD-AA8M-01A 2 3 In-Frame Intra-chr p13.2 Transcription factor p13.2 Seq+ 106360 ChimerSeq TCGA FAWG TCGA_RNA-Seq NXF1-C11orf98 NXF1 chr11 62805329 - C11orf98 chr11 62663333 - Exonic hg38 UVM TCGA-VD-AA8S-01B 5 10 Out-of-frame Intra-chr q12.3 q12.3 106361 ChimerSeq TCGA FAWG TCGA_RNA-Seq NXF1-LBHD1 NXF1 chr11 62805329 - LBHD1 chr11 62663333 - Exonic hg38 UVM TCGA-VD-AA8S-01B 5 10 Out-of-frame Intra-chr q12.3 q12.3 106362 ChimerSeq TCGA FAWG TCGA_RNA-Seq SEPT9-BCAS3 SEPT9 chr17 77402703 + BCAS3 chr17 61368327 + Exonic hg38 UVM TCGA-WC-A884-01A 41 216 Out-of-frame Intra-chr q23.2 Seq+ 106363 ChimerSeq TCGA FAWG TCGA_RNA-Seq TNRC6C-RPTOR TNRC6C chr17 78005079 + RPTOR chr17 80730560 + Exonic hg38 UVM TCGA-WC-A884-01A 1 17 5'UTR-CDS Intra-chr q25.3 q25.3 Seq+ 106364 ChimerSeq TCGA FAWG TCGA_RNA-Seq HNRNPUL2-EML3 HNRNPUL2 chr11 62716989 - EML3 chr11 62611596 - Exonic hg38 UVM TCGA-WC-A885-01A 3 36 In-Frame Intra-chr q12.3 q12.3 Seq+ 106365 ChimerSeq TCGA FAWG TCGA_RNA-Seq FAM193A-NMU FAM193A chr4 2663288 + NMU chr4 55630460 - Exonic hg38 UVM TCGA-YZ-A983-01A 4 13 Out-of-frame Intra-chr p16.3 q12 Seq+ 106366 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 CSNK2B-NDUFA6 CSNK2B chr6 31637694 NDUFA6 chr22 42486682 Exonic hg19 NA NA Out-of-frame Inter-chr 106367 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 IFT57-CALM1 IFT57 chr3 107884313 CALM1 chr14 90871137 Exonic hg19 NA NA Out-of-frame Inter-chr q13.13 q32.11 106368 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 HLA-DRA-CNIH4 HLA-DRA chr6 32411702 CNIH4 chr1 224548265 Exonic hg19 NA NA Out-of-frame Inter-chr q42.11 106369 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 PSMD6-BLOC1S1 PSMD6 chr3 63999276 BLOC1S1 chr12 56113321 Exonic hg19 NA NA Out-of-frame Inter-chr p14.1 q13.2 106370 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 ARC41-CCL2 ARC41 chr7 98990499 CCL2 chr17 32583757 Exonic hg19 NA NA Out-of-frame Inter-chr q12 106371 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 ZNF292-TBCA ZNF292 chr6 87973406 TBCA chr5 77004145 Exonic hg19 NA NA 3'UTR-CDS Inter-chr q14.3 Tumor suppressor gene Transcription factor q14.1 106372 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 C7orf30-SRRM1 C7orf30 chr7 23340527 SRRM1 chr1 24973226 Exonic hg19 NA NA Out-of-frame Inter-chr p36.11 106373 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 S100A10-RSBN1L S100A10 chr1 151955530 RSBN1L chr7 77378794 Exonic hg19 NA NA Out-of-frame Inter-chr q21.3 q11.23 106374 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 MLL5-GK002 MLL5 chr7 104715262 GK002 chr3 139074604 Exonic hg19 NA NA Out-of-frame Inter-chr 106375 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 IGFBP7-EIF5 IGFBP7 chr4 57899465 EIF5 chr14 103807375 Exonic hg19 NA NA Out-of-frame Inter-chr q12 Tumor suppressor gene q32.32 106376 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 NDUFS5-MRPL51 NDUFS5 chr1 39494454 MRPL51 chr12 6602047 Exonic hg19 NA NA Out-of-frame Inter-chr p34.3 p13.31 106377 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 CHCHD7-NEDD8 CHCHD7 chr8 57125423 NEDD8 chr14 24687639 Exonic hg19 NA NA Out-of-frame Inter-chr q12.1 q12 106378 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 PDIA6-MRPS18C PDIA6 chr2 10952868 MRPS18C chr4 84382303 Exonic hg19 NA NA Out-of-frame Inter-chr p25.1 q21.23 106379 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 EIF4B-YY1 EIF4B chr12 53432195 YY1 chr14 100728803 Exonic hg19 NA NA Out-of-frame Inter-chr q13.13 q32.2 Transcription factor 106380 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 ARL2-GTSF1 ARL2 chr11 64786134 GTSF1 chr12 54855958 Exonic hg19 NA NA Out-of-frame Inter-chr q13.1 q13.13 106381 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 RAB25-COX6B1 RAB25 chr1 156035735 COX6B1 chr19 36145542 Exonic hg19 NA NA Out-of-frame Inter-chr q22 Tumor suppressor gene q13.12 106382 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 ATP5I-PLAC9 ATP5I chr4 668040 PLAC9 chr10 81904099 Exonic hg19 NA NA 5'UTR-CDS Inter-chr p16.3 q22.3 106383 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 MRPS24-PSMB2 MRPS24 chr7 43909102 PSMB2 chr1 36070883 Exonic hg19 NA NA 5'UTR-CDS Inter-chr p13 p34.3 106384 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 CHCHD5-RPS5 CHCHD5 chr2 113343576 RPS5 chr19 58905940 Exonic hg19 NA NA Out-of-frame Inter-chr q14.1 q13.43 106385 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 HSP90B1-DKFZp434G222 HSP90B1 chr12 104325338 DKFZp434G222 chr3 141747456 Exonic hg19 NA NA Out-of-frame Inter-chr q23.3 Tumor suppressor gene 106386 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 PSMD13-GAS5 PSMD13 chr11 252555 GAS5 chr1 173835908 Exonic hg19 NA NA Out-of-frame Inter-chr p15.5 q25.1 Tumor suppressor gene 106387 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 GAS5-TMEM189-UBE2V1 GAS5 chr1 173834686 TMEM189-UBE2V1 chr20 48729670 Exonic hg19 NA NA Out-of-frame Inter-chr q25.1 Tumor suppressor gene q13.13 106388 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 ATP5J2-NIT2 ATP5J2 chr7 99063791 NIT2 chr3 100057993 Exonic hg19 NA NA Out-of-frame Inter-chr q22.1 q12.2 Tumor suppressor gene 106389 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 CHCHD7-CCT3 CHCHD7 chr8 57127201 CCT3 chr1 156303389 Exonic hg19 NA NA Out-of-frame Inter-chr q12.1 q22 106390 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 VAMP4-PIGG VAMP4 chr1 171679939 PIGG chr4 527749 Exonic hg19 NA NA Out-of-frame Inter-chr q24.3 p16.3 106391 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 ACR1-GPKOW ACR1 chr11 64088213 GPKOW chrX 48972145 Exonic hg19 NA NA Out-of-frame Inter-chr p11.23 106392 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 LSM3-AKR1A1 LSM3 chr3 14223085 AKR1A1 chr1 46034839 Exonic hg19 NA NA Out-of-frame Inter-chr p25.1 p34.1 106393 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 PTPRB-LEKR1 PTPRB chr12 70925875 LEKR1 chr3 156710509 Exonic hg19 NA NA Out-of-frame Inter-chr q15 q25.31 106394 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 NDUFA5-PPIL3 NDUFA5 chr7 123197858 PPIL3 chr2 201736244 Exonic hg19 NA NA 5'UTR-CDS Inter-chr q31.32 q33.1 106395 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 C14orf100-SEC61G C14orf100 chr14 59953517 SEC61G chr7 54823576 Exonic hg19 NA NA Out-of-frame Inter-chr p11.2 106396 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 SVIP-C8orf59 SVIP chr11 22849421 C8orf59 chr8 86129642 Exonic hg19 NA NA Out-of-frame Inter-chr p14.3 q21.2 106397 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 BC005997-BC047546 BC005997 chr1 211565188 BC047546 chr3 40493272 Exonic hg19 NA NA Out-of-frame Inter-chr 106398 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 AKR1C3-COMMD6 AKR1C3 chr10 5149703 COMMD6 chr13 76111942 Exonic hg19 NA NA Out-of-frame Inter-chr p15.1 q22.2 106399 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 REEP5-VKORC1L1 REEP5 chr5 112222812 VKORC1L1 chr7 65419094 Exonic hg19 NA NA Out-of-frame Inter-chr q22.2 q11.21 106400 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 MAP4K4-REPS2 MAP4K4 chr2 102505357 REPS2 chrX 17157043 Exonic hg19 NA NA Out-of-frame Inter-chr q11.2 p22.2 106401 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 ANKMY1-MRPS24 ANKMY1 chr2 241452254 MRPS24 chr7 43908631 Exonic hg19 NA NA Out-of-frame Inter-chr q37.3 p13 106402 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 TMSB10-KRT10 TMSB10 chr2 85133223 KRT10 chr17 38974729 Exonic hg19 NA NA Out-of-frame Inter-chr p11.2 q21.2 106403 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 NRBP2-FAM136A NRBP2 chr8 144922958 FAM136A chr2 70529097 Exonic hg19 NA NA Out-of-frame Inter-chr q24.3 Other:NRBP p13.3 106404 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 RNF7-RPL26 RNF7 chr3 141457353 RPL26 chr17 8283256 Exonic hg19 NA NA Out-of-frame Inter-chr q23 p13.1 106405 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 DDP2-NDUFA6 DDP2 chr11 111957457 NDUFA6 chr22 42483125 Exonic hg19 NA NA Out-of-frame Inter-chr 106406 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 DNPEP-EIF3K DNPEP chr2 220246780 EIF3K chr19 39123303 Exonic hg19 NA NA Out-of-frame Inter-chr q35 106407 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 BC067244-MRPL3 BC067244 chr8 92082281 MRPL3 chr3 131188564 Exonic hg19 NA NA Out-of-frame Inter-chr q22.1 106408 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 MLPH-FAM21A MLPH chr2 238462349 FAM21A chr10 51838474 Exonic hg19 NA NA Out-of-frame Inter-chr q37.3 106409 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 SNX27-ATF1 SNX27 chr1 151634747 ATF1 chr12 51208087 Exonic hg19 NA NA Out-of-frame Inter-chr q21.3 q13.12 Oncogene Transcription factor 106410 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 ZNF605-PHF14 ZNF605 chr12 133509712 PHF14 chr7 11209075 Exonic hg19 NA NA Out-of-frame Inter-chr q24.33 Transcription factor p21.3 106411 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 CAPZB-CCDC5 CAPZB chr1 19683969 CCDC5 chr18 43708085 Exonic hg19 NA NA Out-of-frame Inter-chr p36.13 106412 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 EHBP1-FAF1 EHBP1 chr2 63272616 FAF1 chr1 50957475 Exonic hg19 NA NA Out-of-frame Inter-chr p15 p32.3 106413 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 ELP3-RPS27L ELP3 chr8 28019578 RPS27L chr15 63448691 Exonic hg19 NA NA Out-of-frame Inter-chr p21.1 q22.2 106414 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 COX5B-RPL10A COX5B chr2 98262654 RPL10A chr6 35438447 Exonic hg19 NA NA Out-of-frame Inter-chr q11.2 p21.31 106415 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 FYB-BUB3 FYB chr5 39119697 BUB3 chr10 124914560 Exonic hg19 NA NA Out-of-frame Inter-chr p13.1 q26.13 106416 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 C7orf28B-HYPK C7orf28B chr7 6840659 HYPK chr15 44093349 Exonic hg19 NA NA Out-of-frame Inter-chr q15.3 106417 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 FYN-POLR3GL FYN chr6 112021437 POLR3GL chr1 145457309 Exonic hg19 NA NA In-Frame Inter-chr q21 TK:Src q21.1 106418 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 AGR2-ESD AGR2 chr7 16839428 ESD chr13 47358452 Exonic hg19 NA NA Out-of-frame Inter-chr p21.1 q14.2 106419 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 C14orf94-CDV3 C14orf94 chr14 23416426 CDV3 chr3 133302893 Exonic hg19 NA NA Out-of-frame Inter-chr q22.1 106420 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 PUF60-DNPEP PUF60 chr8 144899119 DNPEP chr2 220246306 Exonic hg19 NA NA Out-of-frame Inter-chr q35 106421 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 INTS8-MDC1 INTS8 chr8 95888330 MDC1 chr6 30668409 Exonic hg19 NA NA CDS-5'UTR Inter-chr q22.1 Tumor suppressor gene 106422 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 ACBD6-TCOF1 ACBD6 chr1 180461453 TCOF1 chr5 149779466 Exonic hg19 NA NA Out-of-frame Inter-chr q25.3 q32 106423 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 CCDC88B-GCHFR CCDC88B chr11 64123075 GCHFR chr15 41059555 Exonic hg19 NA NA Out-of-frame Inter-chr q13.1 q15.1 106424 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 PACSIN3-AAAS PACSIN3 chr11 47199977 AAAS chr12 53702135 Exonic hg19 NA NA Out-of-frame Inter-chr p11.2 q13.13 106425 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 LSM3-HNRNPH3 LSM3 chr3 14223137 HNRNPH3 chr10 70101581 Exonic hg19 NA NA Out-of-frame Inter-chr p25.1 q21.3 106426 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 CLDND1-BC015653 CLDND1 chr3 98241723 BC015653 chr2 27294273 Exonic hg19 NA NA Out-of-frame Inter-chr q11.2 106427 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 ATP5I-C17orf49 ATP5I chr4 668054 C17orf49 chr17 6917500 Exonic hg19 NA NA Out-of-frame Inter-chr p16.3 p13.1 106428 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 RALA-FRMD4A RALA chr7 39730036 FRMD4A chr10 13900913 Exonic hg19 NA NA Out-of-frame Inter-chr p14.1 p13 106429 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 CCDC50-TRIM38 CCDC50 chr3 191100574 TRIM38 chr6 25972289 Exonic hg19 NA NA Out-of-frame Inter-chr q28 p22.2 106430 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 MRPL15-RAPH1 MRPL15 chr8 55049948 RAPH1 chr2 204360010 Exonic hg19 NA NA Out-of-frame Inter-chr q11.23 q33.2 106431 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 SND1-GLTSCR2 SND1 chr7 127484432 GLTSCR2 chr19 48259985 Exonic hg19 NA NA Out-of-frame Inter-chr q32.1 Tumor suppressor gene 106432 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 COX7A2-ZCCHC17 COX7A2 chr6 75953493 ZCCHC17 chr1 31782981 Exonic hg19 NA NA Out-of-frame Inter-chr q14.1 p35.2 106433 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 CCDC93-PTPN2 CCDC93 chr2 118693133 PTPN2 chr18 12785842 Exonic hg19 NA NA Out-of-frame Inter-chr q14.1 p11.21 Tumor suppressor gene 106434 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 POMP-TMEM59 POMP chr13 29236584 TMEM59 chr1 54497980 Exonic hg19 NA NA Out-of-frame Inter-chr q12.3 p32.3 106435 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 MLPH-FRMD4A MLPH chr2 238462318 FRMD4A chr10 13908304 Exonic hg19 NA NA Out-of-frame Inter-chr q37.3 p13 106436 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 BC070201-APOO BC070201 chr2 112252522 APOO chrX 23892576 Exonic hg19 NA NA Out-of-frame Inter-chr p22.11 106437 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 CWC15-CBR4 CWC15 chr11 94704614 CBR4 chr4 169919439 Exonic hg19 NA NA Out-of-frame Inter-chr q21 q32.3 106438 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 MAGOH-NDUFS4 MAGOH chr12 10766141 NDUFS4 chr5 52942150 Exonic hg19 NA NA Out-of-frame Inter-chr p32.3 Oncogene q11.2 106439 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 LSM3-MTIF2 LSM3 chr3 14220381 MTIF2 chr2 55464471 Exonic hg19 NA NA Out-of-frame Inter-chr p25.1 p16.1 106440 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 PABPN1-PSMB7 PABPN1 chr14 23793383 PSMB7 chr9 127119107 Exonic hg19 NA NA Out-of-frame Inter-chr q11.2 q33.3 106441 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 SYT8-SNRPE SYT8 chr11 1858201 SNRPE chr1 203834249 Exonic hg19 NA NA Out-of-frame Inter-chr p15.5 q32.1 106442 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 CETN3-mm-1 CETN3 chr5 89705585 mm-1 chr12 53693122 Exonic hg19 NA NA Out-of-frame Inter-chr q14.3 106443 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 KIF9-LYRM5 KIF9 chr3 47324047 LYRM5 chr12 25357107 Exonic hg19 NA NA Out-of-frame Inter-chr p21.31 106444 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 IARS2-TFG IARS2 chr1 220316316 TFG chr3 100451457 Exonic hg19 NA NA Out-of-frame Inter-chr q41 q12.2 106445 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 KRTCAP2-REPS2 KRTCAP2 chr1 155145783 REPS2 chrX 17157072 Exonic hg19 NA NA Out-of-frame Inter-chr q22 p22.2 106446 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 NGFRAP1-MRPS21 NGFRAP1 chrX 102632029 MRPS21 chr1 150266798 Exonic hg19 NA NA Out-of-frame Inter-chr q21.2 106447 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 LSM3-NDUFA6 LSM3 chr3 14223089 NDUFA6 chr22 42486696 Exonic hg19 NA NA Out-of-frame Inter-chr p25.1 106448 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 GSTK1-LCORL GSTK1 chr7 142965209 LCORL chr4 17974472 Exonic hg19 NA NA Out-of-frame Inter-chr q34 p15.31 Transcription factor 106449 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 HLA-DPA1-IARS2 HLA-DPA1 chr6 33036514 IARS2 chr1 220318899 Exonic hg19 NA NA Out-of-frame Inter-chr q41 106450 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 AGR3-SUB1 AGR3 chr7 16921607 SUB1 chr5 32591729 Exonic hg19 NA NA Out-of-frame Inter-chr p21.1 p13.3 106451 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 EIF1AX-NDUFA5 EIF1AX chrX 20156722 NDUFA5 chr7 123182277 Exonic hg19 NA NA Out-of-frame Inter-chr p22.12 q31.32 106452 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 C7orf28B-NDUFC1 C7orf28B chr7 6840659 NDUFC1 chr4 140216227 Exonic hg19 NA NA Out-of-frame Inter-chr q31.1 106453 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 CCDC88B-NDUFB3 CCDC88B chr11 64123064 NDUFB3 chr2 201943725 Exonic hg19 NA NA Out-of-frame Inter-chr q13.1 q33.1 106454 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 CD3D-C12orf57 CD3D chr11 118213370 C12orf57 chr12 7054979 Exonic hg19 NA NA Out-of-frame Inter-chr q23.3 p13.31 106455 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 PPP2CB-TIMP1 PPP2CB chr8 30669980 TIMP1 chrX 47444960 Exonic hg19 NA NA Out-of-frame Inter-chr p12 Tumor suppressor gene p11.3 106456 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 RB1CC1-NDUFB5 RB1CC1 chr8 53535236 NDUFB5 chr3 179333801 Exonic hg19 NA NA Out-of-frame Inter-chr q11.23 Tumor suppressor gene q26.33 106457 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 SPCS2-NDUFA1 SPCS2 chr11 74660438 NDUFA1 chrX 119007322 Exonic hg19 NA NA Out-of-frame Inter-chr q13.4 q24 106458 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 OXSM-PDE6D OXSM chr3 25835698 PDE6D chr2 232603898 Exonic hg19 NA NA Out-of-frame Inter-chr p24.2 q37.1 106459 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 NDUFB3-CEP164 NDUFB3 chr2 201943640 CEP164 chr11 117222646 Exonic hg19 NA NA Out-of-frame Inter-chr q33.1 q23.3 106460 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 COX7B-MRPS14 COX7B chrX 77158187 MRPS14 chr1 174987579 Exonic hg19 NA NA Out-of-frame Inter-chr q21.1 q25.1 106461 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 SELK-ELP2 SELK chr3 53925839 ELP2 chr18 33754475 Exonic hg19 NA NA Out-of-frame Inter-chr q12.2 106462 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 C8orf59-MAGI1 C8orf59 chr8 86127183 MAGI1 chr3 65595277 Exonic hg19 NA NA Out-of-frame Inter-chr q21.2 Oncogene 106463 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 COX7B-GPBP1L1 COX7B chrX 77158174 GPBP1L1 chr1 46094082 Exonic hg19 NA NA Out-of-frame Inter-chr q21.1 p34.1 Transcription factor 106464 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 PFDN2-MYCBP PFDN2 chr1 161087772 MYCBP chr1 39333241 Exonic hg19 NA NA Out-of-frame Intra-chr q23.3 p34.3 106465 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 DKFZp667P0924-ANKRD36B DKFZp667P0924 chr2 96591143 ANKRD36B chr2 98139892 Exonic hg19 NA NA Out-of-frame Intra-chr q11.2 106466 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 DKFZp667P0924-ANKRD36B DKFZp667P0924 chr2 96591143 ANKRD36B chr2 98148771 Exonic hg19 NA NA Out-of-frame Intra-chr q11.2 106467 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 DKFZp667P0924-ANKRD36B DKFZp667P0924 chr2 96591144 ANKRD36B chr2 98148771 Exonic hg19 NA NA Out-of-frame Intra-chr q11.2 106468 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 TMSB10-CEBPZ TMSB10 chr2 85132847 CEBPZ chr2 37456102 Exonic hg19 NA NA Out-of-frame Intra-chr p11.2 p22.2 Transcription factor 106469 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 ANXA7-DDX50 ANXA7 chr10 75173811 DDX50 chr10 70679585 Exonic hg19 NA NA Out-of-frame Intra-chr q22.2 Tumor suppressor gene q22.1 106470 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 C1orf21-S100A16 C1orf21 chr1 184476784 S100A16 chr1 153580112 Exonic hg19 NA NA Out-of-frame Intra-chr q25.3 q21.3 106471 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 NDUFB3-ERBB4 NDUFB3 chr2 201943692 ERBB4 chr2 213040625 Exonic hg19 NA NA Out-of-frame Intra-chr q33.1 q34 Oncogene Tumor suppressor gene 106472 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 WFDC3-CDC26 WFDC3 chr20 44411645 CDC26 chr9 116037712 Exonic hg19 NA NA Out-of-frame Inter-chr q13.12 q32 106473 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 CLN6-AGA CLN6 chr15 68499372 AGA chr4 178354448 Exonic hg19 NA NA Out-of-frame Inter-chr q23 q34.3 106474 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 NHP2L1-CHCHD7 NHP2L1 chr22 42076359 CHCHD7 chr8 57129963 Exonic hg19 NA NA Out-of-frame Inter-chr q12.1 106475 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 C16orf80-HNRPDL C16orf80 chr16 58148809 HNRPDL chr4 83347640 Exonic hg19 NA NA Out-of-frame Inter-chr 106476 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 DMKN-BRD8 DMKN chr19 36000839 BRD8 chr5 137506806 Exonic hg19 NA NA Out-of-frame Inter-chr q13.12 q31.2 106477 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 NHP2L1-CHCHD7 NHP2L1 chr22 42076339 CHCHD7 chr8 57129963 Exonic hg19 NA NA Out-of-frame Inter-chr q12.1 106478 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 AK094456-DHRS2 AK094456 chr21 33976459 DHRS2 chr14 24114358 Exonic hg19 NA NA Out-of-frame Inter-chr q11.2 106479 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 DTNA-PPP1R7 DTNA chr18 32374079 PPP1R7 chr2 242105778 Exonic hg19 NA NA Out-of-frame Inter-chr q12.1 q37.3 106480 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 SAFB-PTMA SAFB chr19 5641957 PTMA chr2 232576698 Exonic hg19 NA NA Out-of-frame Inter-chr p13.3 Tumor suppressor gene Transcription factor q37.1 106481 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 PFDN4-NDUFB2 PFDN4 chr20 52830968 NDUFB2 chr7 140404684 Exonic hg19 NA NA Out-of-frame Inter-chr q13.2 q34 106482 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 COX4I1-C19orf62 COX4I1 chr16 85839377 C19orf62 chr19 17389782 Exonic hg19 NA NA Out-of-frame Inter-chr q24.1 106483 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 CROP-RPL37 CROP chr17 48823132 RPL37 chr5 40834308 Exonic hg19 NA NA Out-of-frame Inter-chr p13.1 106484 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 COASY-CCDC72 COASY chr17 40717313 CCDC72 chr3 48485313 Exonic hg19 NA NA Out-of-frame Inter-chr q21.2 106485 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 PSMD8-N4BP2L2 PSMD8 chr19 38873988 N4BP2L2 chr13 33095587 Exonic hg19 NA NA Out-of-frame Inter-chr q13.2 q13.1 106486 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 SPG7-ENPP3 SPG7 chr16 89623342 ENPP3 chr6 132061429 Exonic hg19 NA NA Out-of-frame Inter-chr q24.3 q23.2 106487 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 GOSR1-SFT2D2 GOSR1 chr17 28808229 SFT2D2 chr1 168206011 Exonic hg19 NA NA Out-of-frame Inter-chr q11.2 q24.2 106488 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 KIAA1019-BC035889 KIAA1019 chr21 34915475 BC035889 chr7 27167946 Exonic hg19 NA NA Out-of-frame Inter-chr 106489 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 TIMP2-YAF2 TIMP2 chr17 76849174 YAF2 chr12 42555494 Exonic hg19 NA NA Out-of-frame Inter-chr q25.3 q12 106490 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 RPL36-CAPZB RPL36 chr19 5691678 CAPZB chr1 19670922 Exonic hg19 NA NA 3'UTR-3'UTR Inter-chr p13.3 p36.13 106491 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 EIF3J-EIF3E EIF3J chr15 44846792 EIF3E chr8 109215704 Exonic hg19 NA NA Out-of-frame Inter-chr q21.1 q23.1 106492 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 DECR2-METTL13 DECR2 chr16 462020 METTL13 chr1 171763588 Exonic hg19 NA NA Out-of-frame Inter-chr q24.3 106493 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 RAC2-MCOLN1 RAC2 chr22 37622748 MCOLN1 chr19 7598860 Exonic hg19 NA NA Out-of-frame Inter-chr q13.1 p13.2 106494 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 NDUFV3-MEG4 NDUFV3 chr21 44313490 MEG4 chr10 27406657 Exonic hg19 NA NA Out-of-frame Inter-chr q22.3 106495 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 TXNL1-FAH TXNL1 chr18 54291594 FAH chr15 80465445 Exonic hg19 NA NA Out-of-frame Inter-chr q21.31 q25.1 106496 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 TXNL1-FAH TXNL1 chr18 54291597 FAH chr15 80465445 Exonic hg19 NA NA Out-of-frame Inter-chr q21.31 q25.1 106497 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 NQO1-APOA1BP NQO1 chr16 69746963 APOA1BP chr1 156562400 Exonic hg19 NA NA Out-of-frame Inter-chr q22.1 106498 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 SDF2L1-METTL3 SDF2L1 chr22 21997348 METTL3 chr14 21967486 Exonic hg19 NA NA Out-of-frame Inter-chr q11.21 q11.2 106499 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 SEC11C-LAT SEC11C chr18 56825900 LAT chr16 29001160 Exonic hg19 NA NA Out-of-frame Inter-chr q21.32 p11.2 106500 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 GDPD3-USMG5 GDPD3 chr16 30124016 USMG5 chr10 105156214 Exonic hg19 NA NA Out-of-frame Inter-chr p11.2 q24.33 106501 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 RPL23-SAMD3 RPL23 chr17 37009360 SAMD3 chr6 130476066 Exonic hg19 NA NA Out-of-frame Inter-chr q12 q23.1 106502 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 KARS-C1orf66 KARS chr16 75662522 C1orf66 chr1 156706475 Exonic hg19 NA NA Out-of-frame Inter-chr q23.1 106503 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 GLTSCR2-PDPK1 GLTSCR2 chr19 48259079 PDPK1 chr16 2688693 Exonic hg19 NA NA CDS-3'UTR Inter-chr Tumor suppressor gene p13.3 106504 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 CCL14-S100A4 CCL14 chr17 34328592 S100A4 chr1 153517176 Exonic hg19 NA NA Out-of-frame Inter-chr q12 q21.3 106505 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 TPM1-LAT TPM1 chr15 63354472 LAT chr16 29001590 Exonic hg19 NA NA Out-of-frame Inter-chr q22.2 p11.2 106506 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 CALM1-HBXIP CALM1 chr14 90870253 HBXIP chr1 110944206 Exonic hg19 NA NA Out-of-frame Inter-chr q32.11 106507 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 NDUFAB1-MRPL51 NDUFAB1 chr16 23607477 MRPL51 chr12 6602253 Exonic hg19 NA NA Out-of-frame Inter-chr p12.2 p13.31 106508 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 TXNL1-MX1 TXNL1 chr18 54281730 MX1 chr21 42821118 Exonic hg19 NA NA Out-of-frame Inter-chr q21.31 q22.3 106509 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 GPSN2-NUBP1 GPSN2 chr19 14676463 NUBP1 chr16 10862957 Exonic hg19 NA NA Out-of-frame Inter-chr p13.13 106510 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 CTSA-TCOF1 CTSA chr20 44527458 TCOF1 chr5 149779460 Exonic hg19 NA NA 3'UTR-3'UTR Inter-chr q13.12 q32 106511 ChimerSeq ChimerDB 2.0 ChimerDB 2.0 CYB5A-CAPRIN1 CYB5A chr18 71959097 CAPRIN1 chr11 34118796 Exonic hg19 NA NA Out-of-frame Inter-chr q22.3 Tumor suppressor gene p13 106512 ChimerSeq ChiTaRs ChiTaRs BCR-RALGPS1 BCR chr22 23615961 RALGPS1 chr9 129831507 Exonic hg19 acute lymphoblastic leukemia HQ622706 Out-of-frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q33.3 106513 ChimerSeq ChiTaRs ChiTaRs PAX5-C20orf112 PAX5 chr9 37002696 C20orf112 chr20 31035587 Exonic hg19 acute lymphoblastic leukemia EU784147 Out-of-frame Inter-chr p13.2 Oncogene Tumor suppressor gene Transcription factor 106514 ChimerSeq ChiTaRs ChiTaRs EML4-ALK EML4 chr2 42522660 ALK chr2 29415644 Exonic hg19 acute lymphoblastic leukemia;chronic lymphocytic leukemia;Follicular lymphoma;diffuse large B cell lymphoma;Peripheral T cell lymphoma;Hodgkin disease;adenocarcinoma;adenosquamous carcinoma;squamous cell carcinoma;Nonneoplastic hematologic disorder/lesion;Nonneoplastic epithelial disorder/lesion;non small cell lung cancer AB274722 Out-of-frame Intra-chr p21 Oncogene p23.1 TK:ALK Oncogene KB Pub Seq+ 106515 ChimerSeq ChiTaRs ChiTaRs MEF2D-DAZAP1 MEF2D chr1 156470416 DAZAP1 chr19 1425876 Exonic hg19 acute lymphoblastic leukemia;lymphoblastic lymphoma AY675556 5'UTR-CDS Inter-chr q22 Transcription factor p13.3 KB Pub 106516 ChimerSeq ChiTaRs ChiTaRs CDK6-MLL CDK6 chr7 92404147 MLL chr11 118360505 Exonic hg19 acute lymphoblastic leukemia;lymphoblastic lymphoma AF492830 Out-of-frame Inter-chr q21.2 CMGC:CDK Oncogene Tumor suppressor gene q23.3 106517 ChimerSeq ChiTaRs ChiTaRs ACTN4-MLL ACTN4 chr19 39138548 MLL chr11 118354896 Exonic hg19 acute lymphoblastic leukemia;lymphoblastic lymphoma FM165194 Out-of-frame Inter-chr q23.3 106518 ChimerSeq ChiTaRs ChiTaRs PAX5-AUTS2 PAX5 chr9 36966583 AUTS2 chr7 69599518 Exonic hg19 acute lymphoblastic leukemia;lymphoblastic lymphoma EU784146 Out-of-frame Inter-chr p13.2 Oncogene Tumor suppressor gene Transcription factor q11.22 KB Pub 106519 ChimerSeq ChiTaRs ChiTaRs NOP2-TCF3 NOP2 chr12 6669283 TCF3 chr19 1621017 Exonic hg19 acute lymphoblastic leukemia;lymphoblastic lymphoma EU155120 Out-of-frame Inter-chr p13.31 p13.3 Oncogene Tumor suppressor gene Transcription factor KB Pub 106520 ChimerSeq ChiTaRs ChiTaRs ETV6-INO80D ETV6 chr12 12022904 INO80D chr2 206868945 Exonic hg19 acute lymphoblastic leukemia;lymphoblastic lymphoma JF736506 Out-of-frame Inter-chr p13.2 Tumor suppressor gene Transcription factor 106521 ChimerSeq ChiTaRs ChiTaRs TCF3-ZNF384 TCF3 chr19 1619195 ZNF384 chr12 6788193 Exonic hg19 acute lymphoblastic leukemia;lymphoblastic lymphoma EF613330 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p13.31 Oncogene Transcription factor KB Pub 106522 ChimerSeq ChiTaRs ChiTaRs MLL-AFF3 MLL chr11 118353211 AFF3 chr2 100343552 Exonic hg19 acute lymphoblastic leukemia;lymphoblastic lymphoma;B Cell Acute Lymphoblastic Leukemia AF422798 Out-of-frame Inter-chr q23.3 q11.2 Oncogene 106523 ChimerSeq ChiTaRs ChiTaRs PAX5-FOXP1 PAX5 chr9 37034075 FOXP1 chr3 71008061 Exonic hg19 acute lymphoblastic leukemia;lymphoblastic lymphoma;B cell acute lymphoblastic leukemia DQ845346 Out-of-frame Inter-chr p13.2 Oncogene Tumor suppressor gene Transcription factor p13 Oncogene Tumor suppressor gene Transcription factor Pub 106524 ChimerSeq ChiTaRs ChiTaRs MAPRE1-MLL MAPRE1 chr20 31427663 MLL chr11 118354896 Exonic hg19 acute lymphoblastic leukemia;lymphoblastic lymphoma;B cell acute lymphoblastic leukemia AY752859 Out-of-frame Inter-chr q11.21 q23.3 106525 ChimerSeq ChiTaRs ChiTaRs KMT2A-AFF1 KMT2A chr11 118359475 AFF1 chr4 88005270 Exonic hg19 acute lymphoblastic leukemia;lymphoblastic lymphoma;chronic and acute leukemia;infant precursor B acute lymphoblastic leukemia. JN169752 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor q21.3 Oncogene KB Pub 106526 ChimerSeq ChiTaRs ChiTaRs MLL-FRYL MLL chr11 118358019 FRYL chr4 48531493 Exonic hg19 acute lymphoblastic leukemia;lymphoblastic lymphoma;neuroblastoma;myelodysplasia DQ299935 Out-of-frame Inter-chr q23.3 p11 106527 ChimerSeq ChiTaRs ChiTaRs MLL-MLLT1 MLL chr11 118355676 MLLT1 chr19 6243541 Exonic hg19 acute lymphoblastic leukemia;lymphoblastic lymphoma;T cell acute lymphoblastic leukemia;acute non lymphocytic leukemia;acute myeloid leukemia AF373585 Out-of-frame Inter-chr q23.3 p13.3 106528 ChimerSeq ChiTaRs ChiTaRs RBM15-MKL1 RBM15 chr1 110884907 MKL1 chr22 40825754 Exonic hg19 acute myeloid leukemia AF364035 Out-of-frame Inter-chr p13.3 q13.2 106529 ChimerSeq ChiTaRs ChiTaRs NUP98-PRRX2 NUP98 chr11 3784260 PRRX2 chr9 132481507 Exonic hg19 acute myeloid leukemia AY662674 Out-of-frame Inter-chr p15.4 Oncogene Tumor suppressor gene q34.11 Transcription factor KB 106530 ChimerSeq ChiTaRs ChiTaRs NUP98-HOXD13 NUP98 chr11 3818777 HOXD13 chr2 176959206 Exonic hg19 acute myeloid leukemia AB038155 Out-of-frame Inter-chr p15.4 Oncogene Tumor suppressor gene q31.1 Transcription factor KB Pub 106531 ChimerSeq ChiTaRs ChiTaRs TET1-MLL TET1 chr10 70440903 MLL chr11 118355470 Exonic hg19 acute myeloid leukemia FM165188 Out-of-frame Inter-chr q21.3 Oncogene Transcription factor q23.3 106532 ChimerSeq ChiTaRs ChiTaRs NUP98-HOXC13 NUP98 chr11 3756553 HOXC13 chr12 54338780 Exonic hg19 acute myeloid leukemia AJ438986 Out-of-frame Inter-chr p15.4 Oncogene Tumor suppressor gene q13.13 Transcription factor KB Pub 106533 ChimerSeq ChiTaRs ChiTaRs NUP98-RAP1GDS1 NUP98 chr11 3765781 RAP1GDS1 chr4 99214557 Exonic hg19 acute myeloid leukemia AF133331 Out-of-frame Inter-chr p15.4 Oncogene Tumor suppressor gene q23 KB Pub 106534 ChimerSeq ChiTaRs ChiTaRs MLL-SEPT6 MLL chr11 118355691 2006_ 9_ 1_ chrX 118767398 Exonic hg19 acute myeloid leukemia AF512943 Out-of-frame Inter-chr q23.3 106535 ChimerSeq ChiTaRs ChiTaRs MLL-EP300 MLL chr11 118355690 EP300 chr22 41547835 Exonic hg19 acute myeloid leukemia AY187920 Out-of-frame Inter-chr q23.3 q13.2 Oncogene 106536 ChimerSeq ChiTaRs ChiTaRs RUNX1-SH3D19 RUNX1 chr21 36252948 SH3D19 chr4 152096570 Exonic hg19 acute myeloid leukemia EU093086 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q31.3 KB Pub 106537 ChimerSeq ChiTaRs ChiTaRs MLL-PICALM MLL chr11 118355029 PICALM chr11 85685751 Exonic hg19 acute myeloid leukemia AF477006 In-Frame Intra-chr q23.3 q14.2 106538 ChimerSeq ChiTaRs ChiTaRs RUNX1-RUNX1T1 RUNX1 chr21 36260987 RUNX1T1 chr8 92972035 Exonic hg19 acute myeloid leukemia D13979 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q21.3 Oncogene KB Pub Seq+ 106539 ChimerSeq ChiTaRs ChiTaRs MLL-MYO1F MLL chr11 118355418 MYO1F chr19 8641783 Exonic hg19 acute myeloid leukemia AF499605 Out-of-frame Inter-chr q23.3 p13.2 106540 ChimerSeq ChiTaRs ChiTaRs RUNX1-USP42 RUNX1 chr21 36167758 USP42 chr7 6150914 Exonic hg19 acute myeloid leukemia FR727326 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor p22.1 KB Pub 106541 ChimerSeq ChiTaRs ChiTaRs RUNX1-YTHDF2 RUNX1 chr21 36231803 YTHDF2 chr1 29095441 Exonic hg19 acute myeloid leukemia EU093085 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor p35.3 KB 106542 ChimerSeq ChiTaRs ChiTaRs RUNX1-ZNF687 RUNX1 chr21 36259321 ZNF687 chr1 151255971 Exonic hg19 acute myeloid leukemia EU093088 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q21.3 Transcription factor KB 106543 ChimerSeq ChiTaRs ChiTaRs MLL-CBL MLL chr11 118353213 CBL chr11 119155677 Exonic hg19 acute myeloid leukemia AY125965 Out-of-frame Intra-chr q23.3 q23.3 Oncogene Tumor suppressor gene 106544 ChimerSeq ChiTaRs ChiTaRs KMT2A-PICALM KMT2A chr11 118355475 PICALM chr11 85718585 Exonic hg19 acute myeloid leukemia AF477007 Out-of-frame Intra-chr q23.3 Oncogene Transcription factor q14.2 KB Pub 106545 ChimerSeq ChiTaRs ChiTaRs KAT6A-CREBBP KAT6A chr8 41794961 CREBBP chr16 3843578 Exonic hg19 acute myeloid leukemia AJ251843 Out-of-frame Inter-chr p11.21 Oncogene p13.3 Oncogene Tumor suppressor gene KB Pub Seq+ 106546 ChimerSeq ChiTaRs ChiTaRs KAT6B-CREBBP KAT6B chr10 76785007 CREBBP chr16 3900846 Exonic hg19 acute myeloid leukemia AJ299261 In-Frame Inter-chr Oncogene p13.3 Oncogene Tumor suppressor gene KB 106547 ChimerSeq ChiTaRs ChiTaRs NUP98-PHF23 NUP98 chr11 3803347 PHF23 chr17 7138945 Exonic hg19 acute myeloid leukemia EF071958 Out-of-frame Inter-chr p15.4 Oncogene Tumor suppressor gene p13.1 KB Pub 106548 ChimerSeq ChiTaRs ChiTaRs BCOR-RARA BCOR chrX 39937182 RARA chr17 38504566 Exonic hg19 acute myeloid leukemia HM597846 Out-of-frame Inter-chr p11.4 Oncogene q21.2 Oncogene Transcription factor KB Pub 106549 ChimerSeq ChiTaRs ChiTaRs RPN1-MECOM RPN1 chr3 128369493 MECOM chr3 168849291 Exonic hg19 acute myeloid leukemia AF310158 Out-of-frame Intra-chr q21.3 q26.2 Transcription factor KB Pub 106550 ChimerSeq ChiTaRs ChiTaRs NUP98-RARG NUP98 chr11 3774569 RARG chr12 53607405 Exonic hg19 acute myeloid leukemia HQ229990 Out-of-frame Inter-chr p15.4 Oncogene Tumor suppressor gene q13.13 Transcription factor KB Pub 106551 ChimerSeq ChiTaRs ChiTaRs RUNX1-CBFA2T2 RUNX1 chr21 36231874 CBFA2T2 chr20 32194762 Exonic hg19 acute myeloid leukemia GU070940 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q11.21 106552 ChimerSeq ChiTaRs ChiTaRs RUNX1-C20orf112 RUNX1 chr21 36252936 C20orf112 chr20 31099207 Exonic hg19 acute myeloid leukemia GU070941 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor 106553 ChimerSeq ChiTaRs ChiTaRs ETV6-PRDM16 ETV6 chr12 12006497 PRDM16 chr1 3102687 Exonic hg19 acute myeloid leukemia FR719953 Out-of-frame Inter-chr p13.2 Tumor suppressor gene Transcription factor p36.32 Transcription factor 106554 ChimerSeq ChiTaRs ChiTaRs TCF3-PBX1 TCF3 chr19 1619803 PBX1 chr1 164761730 Exonic hg19 acute myeloid leukemia;acute lymphoblastic lekemia;lymphoblastic lymphoma;acute non lymphocytic leukemia;B cell acute lymphoblastic leukemia AY311345 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor q23.3 Oncogene Transcription factor KB Pub 106555 ChimerSeq ChiTaRs ChiTaRs MLLT4-MLL MLLT4 chr6 168250336 MLL chr11 118354107 Exonic hg19 acute myeloid leukemia;acute lymphoblastic lekemia;lymphoblastic lymphoma;monoclonal gammopathy of undetermined significance;acute non lymphocytic leukemia AY288776 Out-of-frame Inter-chr q23.3 106556 ChimerSeq ChiTaRs ChiTaRs MLL-MLLT10 MLL chr11 118352983 MLLT10 chr10 22015355 Exonic hg19 acute myeloid leukemia;Acute lymphoblastic leukemia;lymphoblastic lymphoma AF242207 Out-of-frame Inter-chr q23.3 p12.31 Oncogene 106557 ChimerSeq ChiTaRs ChiTaRs ETV6-ACSL6 ETV6 chr12 11803094 ACSL6 chr5 131308480 Exonic hg19 acute myeloid leukemia;chronic myeloid leukemia AF102845 In-Frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q31.1 KB Pub 106558 ChimerSeq ChiTaRs ChiTaRs BCR-FGFR1 BCR chr22 23603730 FGFR1 chr8 38275780 Exonic hg19 acute myeloid leukemia;chronic myeloid leukemia;acute lymphoblastic leukemia;lymphoblastic lymphoma AB742170 Out-of-frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene p11.23 TK:FGFR Oncogene KB Pub 106559 ChimerSeq ChiTaRs ChiTaRs NUP98-HOXA9 NUP98 chr11 3765784 HOXA9 chr7 27203339 Exonic hg19 acute myeloid leukemia;chronic myeloid leukemia;chromic myelomonocytic leukemia U41814 Out-of-frame Inter-chr p15.4 Oncogene Tumor suppressor gene p15.2 Transcription factor KB Pub 106560 ChimerSeq ChiTaRs ChiTaRs NUP98-DDX10 NUP98 chr11 3765871 DDX10 chr11 108550096 Exonic hg19 acute myeloid leukemia;chronic myeloid leukemia;chromic myelomonocytic leukemia AB000267 Out-of-frame Intra-chr p15.4 Oncogene Tumor suppressor gene q22.3 KB Pub 106561 ChimerSeq ChiTaRs ChiTaRs BCR-JAK2 BCR chr22 23524426 JAK2 chr9 5077449 Exonic hg19 acute myeloid leukemia;chronic myeloid leukemia;chronic myeloproliferative disorder JN021381 Out-of-frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene p24.1 TK:JakA Oncogene KB Pub 106562 ChimerSeq ChiTaRs ChiTaRs RUNX1-MECOM RUNX1 chr21 36265246 MECOM chr3 169201459 Exonic hg19 acute myeloid leukemia;chronic myeloid leukemia;myelodysplastic syndromes;acute non lymphocytic leukemia L21756 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q26.2 Transcription factor KB Pub Seq+ 106563 ChimerSeq ChiTaRs ChiTaRs FUS-ERG FUS chr16 31198158 ERG chr21 39755726 Exonic hg19 acute myeloid leukemia;ewing tumor S77574 Out-of-frame Inter-chr p11.2 Tumor suppressor gene q22.2 Oncogene Transcription factor KB 106564 ChimerSeq ChiTaRs ChiTaRs ETV6-NTRK3 ETV6 chr12 12022903 NTRK3 chr15 88419991 Exonic hg19 acute myeloid leukemia;mesoblastic nephroma AF041811 CDS-3'UTR Inter-chr p13.2 Tumor suppressor gene Transcription factor q25.3 Oncogene Tumor suppressor gene KB Pub Seq+ 106565 ChimerSeq ChiTaRs ChiTaRs MLL-MLLT3 MLL chr11 118358590 MLLT3 chr9 20377531 Exonic hg19 acute myeloid leukemia;monoclonal gammopathy of undetermined significance;acute non lymphocytic leukemia AM050804 Out-of-frame Inter-chr q23.3 p21.3 106566 ChimerSeq ChiTaRs ChiTaRs MLL-ELL MLL chr11 118355030 ELL chr19 18552836 Exonic hg19 acute myeloid leukemia;T cell acute myelocytic leukemia. acute non lymphocytic leukemia AF272373 Out-of-frame Inter-chr q23.3 p13.11 106567 ChimerSeq ChiTaRs ChiTaRs NPM1-RARA NPM1 chr5 170818803 RARA chr17 38504565 Exonic hg19 acute non lymphocytic leukemia U41743 Out-of-frame Inter-chr q35.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub 106568 ChimerSeq ChiTaRs ChiTaRs MLL-SEPT5 MLL chr11 118355030 2005_ 9_ 1_ chr22 19707123 Exonic hg19 acute non lymphocytic leukemia AF061154 Out-of-frame Inter-chr q23.3 106569 ChimerSeq ChiTaRs ChiTaRs PRKAR1A-RARA PRKAR1A chr17 66518996 RARA chr17 38504566 Exonic hg19 acute promyelocytic leukemia EF428110 Out-of-frame Intra-chr q24.2 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub 106570 ChimerSeq ChiTaRs ChiTaRs NUMA1-RARA NUMA1 chr11 71717270 RARA chr17 38504544 Exonic hg19 acute promyelocytic leukemia AF012304 Out-of-frame Inter-chr q13.4 Oncogene q21.2 Oncogene Transcription factor KB Pub 106571 ChimerSeq ChiTaRs ChiTaRs PML-RARA PML chr15 74325609 RARA chr17 38503513 Exonic hg19 acute promyelocytic leukemia AB067754 Out-of-frame Inter-chr q24.1 Oncogene Tumor suppressor gene q21.2 Oncogene Transcription factor KB Pub Seq+ 106572 ChimerSeq ChiTaRs ChiTaRs EWSR1-ZNF384 EWSR1 chr22 29688158 ZNF384 chr12 6788300 Exonic hg19 acute undifferentiated leukemia;acute lymphoblastic leukemia;lymphoblastic lymphoma;chronic and acute leukemia. EU327511 Out-of-frame Inter-chr q12.2 p13.31 Oncogene Transcription factor KB Pub 106573 ChimerSeq ChiTaRs ChiTaRs ETV6-ABL1 ETV6 chr12 12006495 ABL1 chr9 133729449 Exonic hg19 acute undifferentiated leukemia;acute myeloid leukemia;acute myeloblastic leukemia;acute myeloblastic leukemia with maturation;chronic myeloid leukemia;atypical chronic myeloid leukemia; acute lymphoblastic leukemia/lymphoblastic lymphoma;de novo acute non lymphocytic leukemia Z35761 Out-of-frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q34.12 TK:Abl Oncogene KB Pub 106574 ChimerSeq ChiTaRs ChiTaRs PCM1-RET PCM1 chr8 17851129 RET chr10 43612030 Exonic hg19 adenocarcinoma AJ297349 Out-of-frame Inter-chr p22 q11.21 TK:Ret Oncogene KB 106575 ChimerSeq ChiTaRs ChiTaRs HNRNPA2B1-ETV1 HNRNPA2B1 chr7 26240366 ETV1 chr7 13978820 Exonic hg19 adenocarcinoma EF632110 Out-of-frame Intra-chr p15.2 p21.2 Oncogene Transcription factor KB 106576 ChimerSeq ChiTaRs ChiTaRs TRIM27-RET TRIM27 chr6 232335 RET chr10 43608999 Exonic hg19 adenocarcinoma M16029 Out-of-frame Inter-chr q11.21 TK:Ret Oncogene KB Pub Seq+ 106577 ChimerSeq ChiTaRs ChiTaRs SLC45A3-ETV5 SLC45A3 chr1 205649751 ETV5 chr3 185775008 Exonic hg19 adenocarcinoma EU314932 Out-of-frame Inter-chr q32.1 q27.2 Oncogene Transcription factor KB Pub 106578 ChimerSeq ChiTaRs ChiTaRs SLC45A3-ETV1 SLC45A3 chr1 205649747 ETV1 chr7 13978820 Exonic hg19 adenocarcinoma EF632109 Out-of-frame Inter-chr q32.1 p21.2 Oncogene Transcription factor KB Seq+ 106579 ChimerSeq ChiTaRs ChiTaRs AGTRAP-BRAF AGTRAP chr1 11810243 BRAF chr7 140433813 Exonic hg19 adenocarcinoma HM053972 Out-of-frame Inter-chr p36.22 q34 TKL:RAF Oncogene KB 106580 ChimerSeq ChiTaRs ChiTaRs KLK2-ETV1 KLK2 chr19 51376775 ETV1 chr7 13946187 Exonic hg19 adenocarcinoma HM245385 In-Frame Inter-chr q13.33 p21.2 Oncogene Transcription factor KB Seq+ 106581 ChimerSeq ChiTaRs ChiTaRs MIR548F1-NTRK1 MIR548F1 chr1 186344174 NTRK1 chr1 156845411 Exonic hg19 adenocarcinoma X62947 Out-of-frame Intra-chr q21.1 q23.1 Oncogene 106582 ChimerSeq ChiTaRs ChiTaRs EIF4E2-HJURP EIF4E2 chr2 233421220 HJURP chr2 234749255 Exonic hg19 adenocarcinoma FJ423746 Out-of-frame Intra-chr q37.1 q37.1 106583 ChimerSeq ChiTaRs ChiTaRs LMAN2-AP3S1 LMAN2 chr5 176778510 AP3S1 chr5 115202365 Exonic hg19 adenocarcinoma FJ423753 Out-of-frame Intra-chr q35.3 q22.3 106584 ChimerSeq ChiTaRs ChiTaRs HJURP-INPP4A HJURP chr2 234746300 INPP4A chr2 99193519 Exonic hg19 adenocarcinoma FJ423742 Out-of-frame Intra-chr q37.1 q11.2 106585 ChimerSeq ChiTaRs ChiTaRs RC3H2-RGS3 RC3H2 chr9 125627677 RGS3 chr9 116299076 Exonic hg19 adenocarcinoma FJ423754 Out-of-frame Intra-chr q33.2 q32 106586 ChimerSeq ChiTaRs ChiTaRs TNPO1-IKBKB TNPO1 chr5 72147146 IKBKB chr8 42129599 Exonic hg19 adenocarcinoma HM245392 CDS-5'UTR Inter-chr q13.2 p11.21 Oncogene 106587 ChimerSeq ChiTaRs ChiTaRs CDKN1A-CD9 CDKN1A chr6 36646575 CD9 chr12 6334590 Exonic hg19 adenocarcinoma HM245393 5'UTR-CDS Inter-chr p21.2 Tumor suppressor gene p13.31 106588 ChimerSeq ChiTaRs ChiTaRs CCND1-TACSTD2 CCND1 chr11 69466276 TACSTD2 chr1 59041101 Exonic hg19 adenocarcinoma X77754 Out-of-frame Inter-chr q13.3 Oncogene p32.1 106589 ChimerSeq ChiTaRs ChiTaRs MIER2-RSRC2 MIER2 chr19 334522 RSRC2 chr12 122989749 Exonic hg19 adenocarcinoma HM245396 Out-of-frame Inter-chr p13.3 q24.31 106590 ChimerSeq ChiTaRs ChiTaRs USP10-ZDHHC7 USP10 chr16 84733718 ZDHHC7 chr16 85024091 Exonic hg19 adenocarcinoma FJ423745 Out-of-frame Intra-chr q24.1 q24.1 106591 ChimerSeq ChiTaRs ChiTaRs MIPOL1-DGKB MIPOL1 chr14 37969343 DGKB chr7 14188756 Exonic hg19 adenocarcinoma FJ423747 Out-of-frame Inter-chr q13.3 p21.2 106592 ChimerSeq ChiTaRs ChiTaRs STRN4-TECR STRN4 chr19 47230762 TECR chr19 14673337 Exonic hg19 adenocarcinoma FJ423752 Out-of-frame Intra-chr q13.32 p13.12 106593 ChimerSeq ChiTaRs ChiTaRs ALG5-PIGU ALG5 chr13 37567805 PIGU chr20 33162997 Exonic hg19 adenocarcinoma HM245394 Out-of-frame Inter-chr q13.3 q11.22 106594 ChimerSeq ChiTaRs ChiTaRs CHCHD7-PLAG1 CHCHD7 chr8 57124398 PLAG1 chr8 57080745 Exonic hg19 adenoma DQ478931 Out-of-frame Intra-chr q12.1 q12.1 Oncogene Transcription factor KB Pub 106595 ChimerSeq ChiTaRs ChiTaRs MYB-NFIB MYB chr6 135524462 NFIB chr9 14087937 Exonic hg19 adeoid systic carcinoma;benign epithelial tumor FJ969915 CDS-3'UTR Inter-chr q23.3 Oncogene Transcription factor p22.3 Transcription factor KB Pub Seq+ 106596 ChimerSeq ChiTaRs ChiTaRs SLC45A3-BRAF SLC45A3 chr1 205649630 BRAF chr7 140433812 Exonic hg19 adenocarcinoma GU149303 5'UTR-3'UTR Inter-chr q32.1 q34 TKL:RAF Oncogene KB Pub 106597 ChimerSeq ChiTaRs ChiTaRs ASPSCR1-TFE3 ASPSCR1 chr17 79954722 TFE3 chrX 48891659 Exonic hg19 alveolar soft part sarcoma renal cell carcinoma AY034077 In-Frame Inter-chr q25.3 p11.23 Oncogene Transcription factor KB Pub 106598 ChimerSeq ChiTaRs ChiTaRs MSN-ALK MSN chrX 64958831 ALK chr2 29446322 Exonic hg19 anaplastic large cell lymphoma AF295078 Out-of-frame Inter-chr q12 p23.1 TK:ALK Oncogene KB Pub 106599 ChimerSeq ChiTaRs ChiTaRs NPM1-ALK NPM1 chr5 170818803 ALK chr2 29415642 Exonic hg19 anaplastic large cell lymphoma;Hodgkin disease;npn Hodgkin lymphoma D45915 CDS-3'UTR Inter-chr q35.1 Oncogene Tumor suppressor gene p23.1 TK:ALK Oncogene KB Pub 106600 ChimerSeq ChiTaRs ChiTaRs TPM3-ALK TPM3 chr1 154137866 ALK chr2 29446396 Exonic hg19 anaplastic large cell lymphoma;myofibroblastic sarcoma AF112866 Out-of-frame Inter-chr q21.3 p23.1 TK:ALK Oncogene KB Pub 106601 ChimerSeq ChiTaRs ChiTaRs TCF12-MLL TCF12 chr15 57240648 MLL chr11 118354792 Exonic hg19 anemia JF938533 Out-of-frame Inter-chr q21.3 Oncogene Transcription factor q23.3 106602 ChimerSeq ChiTaRs ChiTaRs THRAP3-USP6 THRAP3 chr1 36690107 USP6 chr17 5033229 Exonic hg19 aneurysmal bone cyst AY624559 Out-of-frame Inter-chr p34.3 p13.2 KB 106603 ChimerSeq ChiTaRs ChiTaRs CNBP-USP6 CNBP chr3 128902727 USP6 chr17 5033660 Exonic hg19 aneurysmal bone cyst AY624556 Out-of-frame Inter-chr q21.3 p13.2 KB 106604 ChimerSeq ChiTaRs ChiTaRs COL1A1-USP6 COL1A1 chr17 48278911 USP6 chr17 5033231 Exonic hg19 aneurysmal bone cyst AY624558 Out-of-frame Intra-chr q21.33 Oncogene p13.2 KB Pub 106605 ChimerSeq ChiTaRs ChiTaRs CENPP-USP6 CENPP chr9 95186587 USP6 chr17 5033229 Exonic hg19 aneurysmal bone cyst AY624560 Out-of-frame Inter-chr q22.31 p13.2 106606 ChimerSeq ChiTaRs ChiTaRs KIAA1549-BRAF KIAA1549 chr7 138666064 BRAF chr7 140434287 Exonic hg19 astrocytoma AM989472 5'UTR-3'UTR Intra-chr q34 q34 TKL:RAF Oncogene KB Pub 106607 ChimerSeq ChiTaRs ChiTaRs SRGAP3-RAF1 SRGAP3 chr3 9290737 RAF1 chr3 12625108 Exonic hg19 astrocytoma FM209427 Out-of-frame Intra-chr p25.3 Tumor suppressor gene p25.2 TKL:RAF Oncogene KB Pub 106608 ChimerSeq ChiTaRs ChiTaRs ETV6-BAZ2A ETV6 chr12 11905514 BAZ2A chr12 57020574 Exonic hg19 biphenotypic leukemia;acute lymphoblastic leukemia lymphoblastic lymphoma;chronic and acute leukemia. AM181353 Out-of-frame Intra-chr p13.2 Tumor suppressor gene Transcription factor q13.3 Transcription factor 106609 ChimerSeq ChiTaRs ChiTaRs ETV6-RUNX1 ETV6 chr12 12035545 RUNX1 chr21 36264754 Exonic hg19 biphenotypic leukemia;acute lymphoblastic leukemia;lymphoblastic lymphoma AJ494735 Out-of-frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q22.12 Oncogene Tumor suppressor gene Transcription factor KB Pub 106610 ChimerSeq ChiTaRs ChiTaRs KAT6A-NCOA2 KAT6A chr8 41794848 NCOA2 chr8 71053441 Exonic hg19 biphenotypic leukemia;acute lymphoblastic leukemia;lymphoblastic lymphoma EF374064 Out-of-frame Intra-chr p11.21 Oncogene q13.3 Oncogene Transcription factor KB Pub 106611 ChimerSeq ChiTaRs ChiTaRs MLL-EPS15 MLL chr11 118355690 EPS15 chr1 51930956 Exonic hg19 biphenotypic leukemia;acute myeloid leukemia;acute lymphoblastic leukemia;lymphoblastic lymphoma AY187922 In-Frame Inter-chr q23.3 p32.3 106612 ChimerSeq ChiTaRs ChiTaRs BCR-ABL1 BCR chr22 23615962 ABL1 chr9 133590436 Exonic hg19 biphenotypic leukemia;acute myeloid leukemia;acute lymphoblastic leukemia;lymphoblastic lymphoma;chronic myeloid leukemia AB069693 Out-of-frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q34.12 TK:Abl Oncogene KB Pub Seq+ 106613 ChimerSeq ChiTaRs ChiTaRs MLL-AFF1 MLL chr11 118353210 AFF1 chr4 88005270 Exonic hg19 biphenotypic leukemia;acute myeloid leukemia;acute lymphoblastic leukemia;lymphoblastic lymphoma;chronic myeloid leukemia;neuroblastoma;Infant precursor B acute lymphoblastic leukemia AF024541 Out-of-frame Inter-chr q23.3 q21.3 Oncogene 106614 ChimerSeq ChiTaRs ChiTaRs BCOR-CCNB3 BCOR chrX 39937182 CCNB3 chrX 50051504 Exonic hg19 bone sarcoma JN813375 5'UTR-CDS Intra-chr p11.4 Oncogene p11.22 KB Pub 106615 ChimerSeq ChiTaRs ChiTaRs TENM4-NRG1 TENM4 chr11 78926957 NRG1 chr8 32453345 Exonic hg19 breast cancer AF009227 Out-of-frame Inter-chr q14.1 p12 106616 ChimerSeq ChiTaRs ChiTaRs BRD4-NUTM1 BRD4 chr19 15391262 NUTM1 chr15 34640165 Exonic hg19 carcinoma AY166680 Out-of-frame Inter-chr p13.12 Atypical:BRD q14 KB Pub 106617 ChimerSeq ChiTaRs ChiTaRs R3HDM2-NFE2 R3HDM2 chr12 57789580 NFE2 chr12 54688981 Exonic hg19 carcinoma GU068583 Out-of-frame Intra-chr q13.3 q13.13 Transcription factor KB Pub 106618 ChimerSeq ChiTaRs ChiTaRs TAF15-NR4A3 TAF15 chr17 34149837 NR4A3 chr9 102590321 Exonic hg19 chomdrosarcoma AF162670 CDS-5'UTR Inter-chr q12 q31.1 Tumor suppressor gene Transcription factor KB Pub 106619 ChimerSeq ChiTaRs ChiTaRs TCF12-NR4A3 TCF12 chr15 57384089 NR4A3 chr9 102590322 Exonic hg19 chomdrosarcoma AF289510 In-Frame Inter-chr q21.3 Oncogene Transcription factor q31.1 Tumor suppressor gene Transcription factor KB Pub 106620 ChimerSeq ChiTaRs ChiTaRs EWSR1-NR4A3 EWSR1 chr22 29688159 NR4A3 chr9 102589010 Exonic hg19 chomdrosarcoma AF524261 Out-of-frame Inter-chr q12.2 q31.1 Tumor suppressor gene Transcription factor KB Pub 106621 ChimerSeq ChiTaRs ChiTaRs PAX5-ETV6 PAX5 chr9 37034075 ETV6 chr12 11992072 Exonic hg19 chronic myeloid leukemia DQ841178 Out-of-frame Inter-chr p13.2 Oncogene Tumor suppressor gene Transcription factor p13.2 Tumor suppressor gene Transcription factor KB Pub 106622 ChimerSeq ChiTaRs ChiTaRs NIN-PDGFRB NIN chr14 51206102 PDGFRB chr5 149503812 Exonic hg19 chronic myeloid leukemia AY764156 Out-of-frame Inter-chr q22.1 Oncogene q32 Oncogene KB Pub 106623 ChimerSeq ChiTaRs ChiTaRs PDGFRB-NDE1 PDGFRB chr5 149508606 NDE1 chr16 15784389 Exonic hg19 chronic myeloid leukemia DQ317513 Out-of-frame Inter-chr q32 Oncogene p13.11 KB Pub 106624 ChimerSeq ChiTaRs ChiTaRs BCR-PDGFRA BCR chr22 23652041 PDGFRA chr4 55141056 Exonic hg19 chronic myeloproliferative disorders AY303970 Out-of-frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q12 Oncogene KB Pub 106625 ChimerSeq ChiTaRs ChiTaRs COL1A1-PDGFB COL1A1 chr17 48270408 PDGFB chr22 39631819 Exonic hg19 dermatofibrosarcoma X98708 In-Frame Inter-chr q21.33 Oncogene q13.1 Oncogene KB Pub 106626 ChimerSeq ChiTaRs ChiTaRs EWSR1-WT1 EWSR1 chr22 29683128 WT1 chr11 32410699 Exonic hg19 desmoplastic small round cell tumor S74529 Out-of-frame Inter-chr q12.2 p13 Oncogene Tumor suppressor gene Transcription factor KB Pub 106627 ChimerSeq ChiTaRs ChiTaRs EWSR1-ERG EWSR1 chr22 29683123 ERG chr21 39764323 Exonic hg19 desmoplastic small round cell tumor S70579 In-Frame Inter-chr q12.2 q22.2 Oncogene Transcription factor KB Pub 106628 ChimerSeq ChiTaRs ChiTaRs SQSTM1-ALK SQSTM1 chr5 179252226 ALK chr2 29416042 Exonic hg19 diffuse large B cell lymphoma;MALT lymphoma AB583922 CDS-3'UTR Inter-chr q35.3 p23.1 TK:ALK Oncogene KB Pub 106629 ChimerSeq ChiTaRs ChiTaRs EWSR1-ETV4 EWSR1 chr22 29684696 ETV4 chr17 41609278 Exonic hg19 ewing sarcoma AB005538 Out-of-frame Inter-chr q12.2 q21.31 Oncogene Transcription factor KB Pub 106630 ChimerSeq ChiTaRs ChiTaRs EWSR1-EWSR1 EWSR1 chr22 29684475 EWSR1 chr22 29684517 Exonic hg19 ewing sarcoma AJ229257 Out-of-frame Intra-chr q12.2 q12.2 106631 ChimerSeq ChiTaRs ChiTaRs EWSR1-PATZ1 EWSR1 chr22 29684775 PATZ1 chr22 31737362 Exonic hg19 ewing tumor AF254086 CDS-3'UTR Intra-chr q12.2 q12.2 Transcription factor KB Pub 106632 ChimerSeq ChiTaRs ChiTaRs MYH9-USP6 MYH9 chr22 36783984 USP6 chr17 5033229 Exonic hg19 fasciitis HQ326700 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene p13.2 KB Pub 106633 ChimerSeq ChiTaRs ChiTaRs FUS-CREB3L2 FUS chr16 31199514 CREB3L2 chr7 137565145 Exonic hg19 fibromyxoid sarcoma AJ549093 Out-of-frame Inter-chr p11.2 Tumor suppressor gene q33 Transcription factor KB Pub 106634 ChimerSeq ChiTaRs ChiTaRs FIP1L1-PDGFRA FIP1L1 chr4 54292132 PDGFRA chr4 55141089 Exonic hg19 idiopathic hypereosinophilic syndrome AY229892 In-Frame Intra-chr q12 q12 Oncogene KB Pub 106635 ChimerSeq ChiTaRs ChiTaRs DCTN1-ALK DCTN1 chr2 74596332 ALK chr2 29445266 Exonic hg19 inflammatory myofibroblastic tumor;myofibroblastic sarcoma HQ993071 Out-of-frame Intra-chr p13.1 p23.1 TK:ALK Oncogene KB Pub 106636 ChimerSeq ChiTaRs ChiTaRs HMGA2-RAD51B HMGA2 chr12 66357844 RAD51B chr14 68418832 Exonic hg19 leiomyoma AF533653 Out-of-frame Inter-chr q14.3 Transcription factor q24.1 KB Pub 106637 ChimerSeq ChiTaRs ChiTaRs HAS2-PLAG1 HAS2 chr8 122653424 PLAG1 chr8 57083650 Exonic hg19 lipoblastoma AF221548 Out-of-frame Intra-chr q24.13 q12.1 Oncogene Transcription factor KB Pub 106638 ChimerSeq ChiTaRs ChiTaRs COL1A2-PLAG1 COL1A2 chr7 94024413 PLAG1 chr8 57080664 Exonic hg19 lipoblastoma AF221550 Out-of-frame Inter-chr q21.3 q12.1 Oncogene Transcription factor KB Pub 106639 ChimerSeq ChiTaRs ChiTaRs HMGA2-CACNB4 HMGA2 chr12 66357169 CACNB4 chr2 152897500 Exonic hg19 lipoma FJ469146 Out-of-frame Inter-chr q14.3 Transcription factor q23.3 106640 ChimerSeq ChiTaRs ChiTaRs FUS-DDIT3 FUS chr16 31202431 DDIT3 chr12 57912676 Exonic hg19 liposarcoma AJ301613 5'UTR-5'UTR Inter-chr p11.2 Tumor suppressor gene q13.3 Oncogene Transcription factor KB Pub 106641 ChimerSeq ChiTaRs ChiTaRs TFG-NR4A3 TFG chr3 100463775 NR4A3 chr9 102590320 Exonic hg19 liposarcoma;chondrosarcoma AY532911 CDS-5'UTR Inter-chr q12.2 q31.1 Tumor suppressor gene Transcription factor KB Pub 106642 ChimerSeq ChiTaRs ChiTaRs IL2-TNFRSF17 IL2 chr4 123377565 TNFRSF17 chr16 12059189 Exonic hg19 mature T and NKcell neoplasm Z14955 Out-of-frame Inter-chr q27 Oncogene p13.13 KB 106643 ChimerSeq ChiTaRs ChiTaRs EWSR1-FLI1 EWSR1 chr22 29683125 FLI1 chr11 128677075 Exonic hg19 meduloblastoma AF327066 Out-of-frame Inter-chr q12.2 q24.3 Oncogene Transcription factor KB Pub 106644 ChimerSeq ChiTaRs ChiTaRs CDKN2A-FAM230A CDKN2A chr9 21994490 FAM230A chr22 20695277 Exonic hg19 melanoma JX456221 Out-of-frame Inter-chr p21.3 Oncogene Tumor suppressor gene q11.21 106645 ChimerSeq ChiTaRs ChiTaRs FGFR1-PLAG1 FGFR1 chr8 38325518 PLAG1 chr8 57080872 Exonic hg19 mucoepidermoid carcinoma EF525170 Out-of-frame Intra-chr p11.23 TK:FGFR Oncogene q12.1 Oncogene Transcription factor KB Pub 106646 ChimerSeq ChiTaRs ChiTaRs CRTC3-MAML2 CRTC3 chr15 91073435 MAML2 chr11 95826625 Exonic hg19 mucoepidermoid carcinoma EU048224 In-Frame Inter-chr q26.1 q21 Oncogene KB Pub 106647 ChimerSeq ChiTaRs ChiTaRs KAT6A-ASXL2 KAT6A chr8 41909478 ASXL2 chr2 25962260 Exonic hg19 myelodysplastic syndrome AB084281 Out-of-frame Inter-chr p11.21 Oncogene p23.3 KB 106648 ChimerSeq ChiTaRs ChiTaRs KMT2A-MAML2 KMT2A chr11 118355029 MAML2 chr11 95826343 Exonic hg19 "myelodysplastic syndromes, myeloid leukemia" DQ886023 Out-of-frame Intra-chr q23.3 Oncogene Transcription factor q21 Oncogene KB Pub 106649 ChimerSeq ChiTaRs ChiTaRs PPFIBP1-ALK PPFIBP1 chr12 27807749 ALK chr2 29416073 Exonic hg19 myofibroblastic sarcoma AB600939 Out-of-frame Inter-chr p11.23 p23.1 TK:ALK Oncogene KB Pub 106650 ChimerSeq ChiTaRs ChiTaRs SLC34A2-ROS1 SLC34A2 chr4 25665952 ROS1 chr6 117609655 Exonic hg19 non small cell lung cancer EU236946 In-Frame Inter-chr p15.2 q22.1 Oncogene KB Pub Seq+ 106651 ChimerSeq ChiTaRs ChiTaRs KIF5B-ALK KIF5B chr10 32344911 ALK chr2 29416073 Exonic hg19 non small cell lung cancer AB462413 Out-of-frame Inter-chr p11.22 p23.1 TK:ALK Oncogene KB Pub 106652 ChimerSeq ChiTaRs ChiTaRs CD74-ROS1 CD74 chr5 149792317 ROS1 chr6 117609626 Exonic hg19 non small cell lung cancer AB795245 Out-of-frame Inter-chr q33.1 q22.1 Oncogene KB Pub Seq+ 106653 ChimerSeq ChiTaRs ChiTaRs CUX1-RET CUX1 chr7 101813831 RET chr10 43612031 Exonic hg19 non small cell lung cancer KF421948 Out-of-frame Inter-chr q22.1 Tumor suppressor gene Transcription factor q11.21 TK:Ret Oncogene 106654 ChimerSeq ChiTaRs ChiTaRs CD74-NTRK1 CD74 chr5 149792499 NTRK1 chr1 156844360 Exonic hg19 non small cell lung cancer HG532018 5'UTR-CDS Inter-chr q33.1 q23.1 Oncogene 106655 ChimerSeq ChiTaRs ChiTaRs HOOK3-RET HOOK3 chr8 42823358 RET chr10 43612030 Exonic hg19 papilary thyroid carcinoma DQ104207 Out-of-frame Inter-chr p11.21 Oncogene q11.21 TK:Ret Oncogene KB Pub 106656 ChimerSeq ChiTaRs ChiTaRs PRKAR1A-RET PRKAR1A chr17 66522054 RET chr10 43612031 Exonic hg19 papilary thyroid carcinoma L03357 Out-of-frame Inter-chr q24.2 Oncogene Tumor suppressor gene q11.21 TK:Ret Oncogene KB 106657 ChimerSeq ChiTaRs ChiTaRs CREB3L2-PPARG CREB3L2 chr7 137686451 PPARG chr3 12421202 Exonic hg19 papilary thyroid carcinoma AY222643 5'UTR-5'UTR Inter-chr q33 Transcription factor p25.2 Oncogene Tumor suppressor gene Transcription factor KB Pub 106658 ChimerSeq ChiTaRs ChiTaRs PARG-RET PARG chr10 51582940 RET chr10 43612030 Exonic hg19 papilary thyroid carcinoma S71225 Out-of-frame Intra-chr q11.23 q11.21 TK:Ret Oncogene 106659 ChimerSeq ChiTaRs ChiTaRs TMPRSS2-ETV1 TMPRSS2 chr21 42880082 ETV1 chr7 14017052 Exonic hg19 prostate cancer DQ204770 Out-of-frame Inter-chr q22.3 p21.2 Oncogene Transcription factor KB Pub Seq+ 106660 ChimerSeq ChiTaRs ChiTaRs TMPRSS2-ETV5 TMPRSS2 chr21 42880083 ETV5 chr3 185798922 Exonic hg19 prostate cancer EU314929 Out-of-frame Inter-chr q22.3 q27.2 Oncogene Transcription factor KB Pub Seq+ 106661 ChimerSeq ChiTaRs ChiTaRs TMPRSS2-ETV4 TMPRSS2 chr21 42880085 ETV4 chr17 41622350 Exonic hg19 prostate cancer EU693079 5'UTR-CDS Inter-chr q22.3 q21.31 Oncogene Transcription factor KB Pub Seq+ 106662 ChimerSeq ChiTaRs ChiTaRs CANT1-ETV4 CANT1 chr17 77001581 ETV4 chr17 41610637 Exonic hg19 prostate cancer EU693078 Out-of-frame Intra-chr q25.3 q21.31 Oncogene Transcription factor KB Pub 106663 ChimerSeq ChiTaRs ChiTaRs DDX5-ETV4 DDX5 chr17 62502407 ETV4 chr17 41605887 Exonic hg19 prostate cancer EU599085 Out-of-frame Intra-chr q23.3 q21.31 Oncogene Transcription factor KB Pub 106664 ChimerSeq ChiTaRs ChiTaRs ESRP1-MKRN2 ESRP1 chr8 95690599 MKRN2 chr3 12625100 Exonic hg19 prostate cancer;gastric cancer;melanoma GU149302 CDS-3'UTR Inter-chr q22.1 Tumor suppressor gene p25.2 106665 ChimerSeq ChiTaRs ChiTaRs KLC1-ALK KLC1 chr14 104139768 ALK chr2 29446367 Exonic hg19 pulmonary adenocarcinoma AB781674 In-Frame Inter-chr q32.33 p23.1 TK:ALK Oncogene KB Pub 106666 ChimerSeq ChiTaRs ChiTaRs FUS-ATF1 FUS chr16 31195717 ATF1 chr12 51207791 Exonic hg19 refractory anemia;angiomatoid malignant fibrous histiocytoma AJ295163 5'UTR-CDS Inter-chr p11.2 Tumor suppressor gene q13.12 Oncogene Transcription factor KB Pub 106667 ChimerSeq ChiTaRs ChiTaRs EWSR1-ATF1 EWSR1 chr22 29683123 ATF1 chr12 51207793 Exonic hg19 refractory anemia;malignant epithelial tumor;angiomatoid malignant fibrous histiocytoma;clear cell sarcoma;soft tissue tumor;miscellaneous soft tissue tumors;osteogenic/bone tumor;ewing tumor AF047022 In-Frame Inter-chr q12.2 q13.12 Oncogene Transcription factor KB Pub 106668 ChimerSeq ChiTaRs ChiTaRs MALAT1-TFEB MALAT1 chr11 65266903 TFEB chr6 41659049 Exonic hg19 renal cell carcinoma AJ535462 Out-of-frame Inter-chr q13.1 p21.1 Transcription factor KB Pub 106669 ChimerSeq ChiTaRs ChiTaRs PAX3-NCOA1 PAX3 chr2 223163334 NCOA1 chr2 24949456 Exonic hg19 rhabdomyosarcoma AY633656 Out-of-frame Intra-chr q36.1 Oncogene Transcription factor p23.3 Oncogene Transcription factor KB Pub 106670 ChimerSeq ChiTaRs ChiTaRs PAX7-FOXO1 PAX7 chr1 19029790 FOXO1 chr13 41134333 Exonic hg19 rhabdomyosarcoma HQ824715 In-Frame Inter-chr p36.13 Oncogene Transcription factor q14.11 Oncogene Tumor suppressor gene Transcription factor KB Pub 106671 ChimerSeq ChiTaRs ChiTaRs FOXO1-PAX3 FOXO1 chr13 41240779 PAX3 chr2 223066552 Exonic hg19 rhabdomyosarcoma JX141474 Out-of-frame Inter-chr q14.11 Oncogene Tumor suppressor gene Transcription factor q36.1 Oncogene Transcription factor KB Pub 106672 ChimerSeq ChiTaRs ChiTaRs PLEKHD1-SLC39A9 PLEKHD1 chr14 69969597 SLC39A9 chr14 69922447 Exonic hg19 schizophrenia KF612914 Out-of-frame Intra-chr q24.1 q24.1 106673 ChimerSeq ChiTaRs ChiTaRs PAX3-MAML3 PAX3 chr2 223096876 MAML3 chr4 140812024 Exonic hg19 sinonasal sarcoma KF727276 Out-of-frame Inter-chr q36.1 Oncogene Transcription factor q31.1 KB Pub 106674 ChimerSeq ChiTaRs ChiTaRs SS18-SSX2 SS18 chr18 23615074 SSX2 chrX 52729527 Exonic hg19 synovial sarcoma AB012575 Out-of-frame Inter-chr q11.2 p11.22 KB Pub Seq+ 106675 ChimerSeq ChiTaRs ChiTaRs MLL-MAML2 MLL chr11 118355030 MAML2 chr11 95712112 Exonic hg19 T cell acute lymphoblastic leukemia AJ972402 Out-of-frame Intra-chr q23.3 q21 Oncogene 106676 ChimerSeq ChiTaRs ChiTaRs MLL-GAS7 MLL chr11 118357206 GAS7 chr17 9953291 Exonic hg19 T cell acute myelocytic leukemia AF231993 Out-of-frame Inter-chr q23.3 p13.1 106677 ChimerSeq ChiTaRs ChiTaRs THADA-PPARG THADA chr2 43823177 PPARG chr3 12361071 Exonic hg19 thyroid adenoma AY149631 Out-of-frame Inter-chr p21 p25.2 Oncogene Tumor suppressor gene Transcription factor 106678 ChimerSeq ChiTaRs ChiTaRs AKAP9-BRAF AKAP9 chr7 91632550 BRAF chr7 140434354 Exonic hg19 thyroid cancer AY803272 Out-of-frame Intra-chr q21.2 Oncogene q34 TKL:RAF Oncogene KB Pub 106679 ChimerSeq ChiTaRs ChiTaRs RAD51B-RPSAP52 RAD51B chr14 68949448 RPSAP52 chr12 66203279 Exonic hg19 uterine Leiomyoma AF044775 Out-of-frame Inter-chr q24.1 q14.3 106680 ChimerSeq ChiTaRs ChiTaRs RPSAP52-COG5 RPSAP52 chr12 66345196 COG5 chr7 106901419 Exonic hg19 uterine leiomyoma GQ272323 Out-of-frame Inter-chr q14.3 106681 ChimerSeq ChiTaRs ChiTaRs RPSAP52-ALDH2 RPSAP52 chr12 66232351 ALDH2 chr12 112247346 Exonic hg19 uterine Leiomyoma. S80262 5'UTR-CDS Intra-chr q14.3 q24.12 106682 ChimerSeq ChiTaRs ChiTaRs CRTC1-MAML2 CRTC1 chr19 18794638 MAML2 chr11 95711440 Exonic hg19 Warthin tumor;mucoepidermoid carcinoma AY040324 CDS-3'UTR Inter-chr p13.11 Oncogene q21 Oncogene KB Pub 106683 ChimerSeq ChiTaRs ChiTaRs TMEM151B-MT1A TMEM151B chr6 44273512 MT1A chr16 56672578 Exonic hg19 NA BF766250 Out-of-frame Inter-chr p21.1 q13 106684 ChimerSeq ChiTaRs ChiTaRs ZNF789-ZNF789 ZNF789 chr7 99084853 ZNF789 chr7 99084697 Exonic hg19 NA AA664651 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Transcription factor 106685 ChimerSeq ChiTaRs ChiTaRs C8orf33-C8orf33 C8orf33 chr8 146278180 C8orf33 chr8 146277901 Exonic hg19 NA BM696889 Out-of-frame Intra-chr q24.3 q24.3 106686 ChimerSeq ChiTaRs ChiTaRs RPLP2-HLA-DPA1 RPLP2 chr11 812874 HLA-DPA1 chr6 4513297 Exonic hg19 NA BQ027739 Out-of-frame Inter-chr p15.5 106687 ChimerSeq ChiTaRs ChiTaRs UQCRH-WASF1 UQCRH chr1 46775925 WASF1 chr6 110500775 Exonic hg19 NA DA168843 Out-of-frame Inter-chr p33 q21 106688 ChimerSeq ChiTaRs ChiTaRs XPO5-RNF11 XPO5 chr6 43506758 RNF11 chr1 51716222 Exonic hg19 NA BC040830 Out-of-frame Inter-chr p21.1 Tumor suppressor gene p32.3 106689 ChimerSeq ChiTaRs ChiTaRs LY6E-LY6E LY6E chr8 144103096 LY6E chr8 144103121 Exonic hg19 NA BE076118 Out-of-frame Intra-chr 106690 ChimerSeq ChiTaRs ChiTaRs HNRNPA2B1-AATF HNRNPA2B1 chr7 26236589 AATF chr17 35310229 Exonic hg19 NA BF800892 Out-of-frame Inter-chr p15.2 106691 ChimerSeq ChiTaRs ChiTaRs BCYRN1-LMBR1 BCYRN1 chrX 70516893 LMBR1 chr7 156473902 Exonic hg19 NA BE161420 Out-of-frame Inter-chr p21 q36.3 106692 ChimerSeq ChiTaRs ChiTaRs ERICH1-ERICH1 ERICH1 chr8 623496 ERICH1 chr8 623865 Exonic hg19 NA BC016017 Out-of-frame Intra-chr 106693 ChimerSeq ChiTaRs ChiTaRs BTN2A1-LAMP1 BTN2A1 chr6 26458241 LAMP1 chr13 113977580 Exonic hg19 NA DW446667 Out-of-frame Inter-chr p22.2 q34 Oncogene 106694 ChimerSeq ChiTaRs ChiTaRs BTBD9-GFAP BTBD9 chr6 38583002 GFAP chr17 42992561 Exonic hg19 NA BQ343441 Out-of-frame Inter-chr p21.2 q21.31 106695 ChimerSeq ChiTaRs ChiTaRs ARHGAP24-BANK1 ARHGAP24 chr4 86491874 BANK1 chr4 102942670 Exonic hg19 NA DA819158 In-Frame Intra-chr q21.23 q24 106696 ChimerSeq ChiTaRs ChiTaRs MPHOSPH10-AES MPHOSPH10 chr2 71362793 AES chr19 3053161 Exonic hg19 NA BE835134 Out-of-frame Inter-chr p13.3 p13.3 106697 ChimerSeq ChiTaRs ChiTaRs LARP1B-LARP1B LARP1B chr4 128998996 LARP1B chr4 129003391 Exonic hg19 NA EB362731 Out-of-frame Intra-chr q28.2 q28.2 106698 ChimerSeq ChiTaRs ChiTaRs VAV3-WARS2 VAV3 chr1 108507503 WARS2 chr1 119584927 Exonic hg19 NA AI672033 Out-of-frame Intra-chr p13.3 p12 106699 ChimerSeq ChiTaRs ChiTaRs HSPA9-NEFL HSPA9 chr5 137896795 NEFL chr8 24813631 Exonic hg19 NA DA499861 Out-of-frame Inter-chr q31.2 p21.2 106700 ChimerSeq ChiTaRs ChiTaRs CDC42BPA-CAMK2A CDC42BPA chr1 227262066 CAMK2A chr5 149599055 Exonic hg19 NA AK098391 Out-of-frame Inter-chr q42.13 q32 106701 ChimerSeq ChiTaRs ChiTaRs C1orf111-SRC C1orf111 chr1 162345154 SRC chr20 35976957 Exonic hg19 NA BF515508 Out-of-frame Inter-chr q11.23 TK:Src Oncogene 106702 ChimerSeq ChiTaRs ChiTaRs MYD88-MYLK MYD88 chr3 38181436 MYLK chr3 123382977 Exonic hg19 NA BP285827 Out-of-frame Intra-chr p22.2 Oncogene q21.1 106703 ChimerSeq ChiTaRs ChiTaRs IFITM2-SLCO4A1 IFITM2 chr11 309211 SLCO4A1 chr20 61280954 Exonic hg19 NA BF853432 Out-of-frame Inter-chr p15.5 q13.33 106704 ChimerSeq ChiTaRs ChiTaRs WDR74-PITRM1 WDR74 chr11 62609281 PITRM1 chr10 3208428 Exonic hg19 NA DA387263 Out-of-frame Inter-chr q12.3 p15.2 106705 ChimerSeq ChiTaRs ChiTaRs FOSL2-FOSL2 FOSL2 chr2 28635168 FOSL2 chr2 28635496 Exonic hg19 NA BF847663 Out-of-frame Intra-chr p23.2 Transcription factor p23.2 Transcription factor 106706 ChimerSeq ChiTaRs ChiTaRs LMCD1-PBX3 LMCD1 chr3 8543667 PBX3 chr9 128691932 Exonic hg19 NA DA020849 Out-of-frame Inter-chr p25.3 q33.3 Transcription factor 106707 ChimerSeq ChiTaRs ChiTaRs IRF7-CARS2 IRF7 chr11 614565 CARS2 chr13 111293852 Exonic hg19 NA BE843753 Out-of-frame Inter-chr Transcription factor q34 106708 ChimerSeq ChiTaRs ChiTaRs MPHOSPH10-MPHOSPH10 MPHOSPH10 chr2 71376457 MPHOSPH10 chr2 71365726 Exonic hg19 NA BU608709 Out-of-frame Intra-chr p13.3 p13.3 106709 ChimerSeq ChiTaRs ChiTaRs MUC2-LSR MUC2 chr11 1098806 LSR chr19 35739940 Exonic hg19 NA BG982813 Out-of-frame Inter-chr q13.12 106710 ChimerSeq ChiTaRs ChiTaRs NISCH-NOLC1 NISCH chr3 52526890 NOLC1 chr10 103919200 Exonic hg19 NA AW071437 Out-of-frame Inter-chr p21.1 q24.32 106711 ChimerSeq ChiTaRs ChiTaRs SURF2-NUP210 SURF2 chr9 136226896 NUP210 chr3 13390185 Exonic hg19 NA AW801070 Out-of-frame Inter-chr p25.1 106712 ChimerSeq ChiTaRs ChiTaRs CERCAM-CERCAM CERCAM chr9 131186903 CERCAM chr9 131185146 Exonic hg19 NA BQ690789 Out-of-frame Intra-chr q34.11 q34.11 106713 ChimerSeq ChiTaRs ChiTaRs EEF1D-EEF1D EEF1D chr8 144679549 EEF1D chr8 144671712 Exonic hg19 NA BF513928 Out-of-frame Intra-chr 106714 ChimerSeq ChiTaRs ChiTaRs RTN4-RTN4 RTN4 chr2 55252279 RTN4 chr2 55253540 Exonic hg19 NA BP251731 Out-of-frame Intra-chr p16.1 Tumor suppressor gene p16.1 Tumor suppressor gene 106715 ChimerSeq ChiTaRs ChiTaRs DUSP1-DUSP1 DUSP1 chr5 172197924 DUSP1 chr5 172195873 Exonic hg19 NA BE501527 Out-of-frame Intra-chr q35.1 Tumor suppressor gene q35.1 Tumor suppressor gene 106716 ChimerSeq ChiTaRs ChiTaRs TCF7L2-ATP5G3 TCF7L2 chr10 114901002 ATP5G3 chr2 176043109 Exonic hg19 NA BF814890 Out-of-frame Inter-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q31.1 106717 ChimerSeq ChiTaRs ChiTaRs NFYA-ZFP36L2 NFYA chr6 41040799 ZFP36L2 chr2 43451713 Exonic hg19 NA BM728873 Out-of-frame Inter-chr p21.1 Transcription factor p21 Tumor suppressor gene 106718 ChimerSeq ChiTaRs ChiTaRs S100A8-S100A8 S100A8 chr1 153362647 S100A8 chr1 153362525 Exonic hg19 NA BF895991 Out-of-frame Intra-chr q21.3 q21.3 106719 ChimerSeq ChiTaRs ChiTaRs XPC-LGALS3BP XPC chr3 14199932 LGALS3BP chr17 76967956 Exonic hg19 NA BE159478 Out-of-frame Inter-chr p25.1 Oncogene q25.3 106720 ChimerSeq ChiTaRs ChiTaRs FAM208A-PTGR2 FAM208A chr3 56660323 PTGR2 chr14 74340894 Exonic hg19 NA CV334907 Out-of-frame Inter-chr p14.3 q24.3 106721 ChimerSeq ChiTaRs ChiTaRs SPTAN1-GPS1 SPTAN1 chr9 131394883 GPS1 chr17 80012815 Exonic hg19 NA AA368286 Out-of-frame Inter-chr q34.11 q25.3 106722 ChimerSeq ChiTaRs ChiTaRs STK17B-CUX1 STK17B chr2 197036275 CUX1 chr7 101916636 Exonic hg19 NA DB106415 5'UTR-CDS Inter-chr q32.3 q22.1 Tumor suppressor gene Transcription factor 106723 ChimerSeq ChiTaRs ChiTaRs PTPRK-PKP2 PTPRK chr6 128841718 PKP2 chr12 33031371 Exonic hg19 NA DA380160 Out-of-frame Inter-chr Tumor suppressor gene p11.21 106724 ChimerSeq ChiTaRs ChiTaRs GNL1-GNL1 GNL1 chr6 1847282 GNL1 chr6 1846018 Exonic hg19 NA AA513620 Out-of-frame Intra-chr 106725 ChimerSeq ChiTaRs ChiTaRs SEMA6A-DLG5 SEMA6A chr5 115782181 DLG5 chr10 79572329 Exonic hg19 NA BF990536 Out-of-frame Inter-chr q23.1 q22.3 106726 ChimerSeq ChiTaRs ChiTaRs GPM6A-SCLT1 GPM6A chr4 176561949 SCLT1 chr4 129857944 Exonic hg19 NA BF956714 Out-of-frame Intra-chr q34.2 q28.2 106727 ChimerSeq ChiTaRs ChiTaRs MPHOSPH10-AES MPHOSPH10 chr2 71362788 AES chr19 3053161 Exonic hg19 NA BE835104 Out-of-frame Inter-chr p13.3 p13.3 106728 ChimerSeq ChiTaRs ChiTaRs CCT7-CCT7 CCT7 chr2 73475003 CCT7 chr2 73475026 Exonic hg19 NA AA192763 Out-of-frame Intra-chr p13.2 p13.2 106729 ChimerSeq ChiTaRs ChiTaRs FBXW5-PSMB10 FBXW5 chr9 139835187 PSMB10 chr16 67970327 Exonic hg19 NA BE832990 Out-of-frame Inter-chr q34.3 q22.1 106730 ChimerSeq ChiTaRs ChiTaRs PCDH11X-TMC4 PCDH11X chrX 91157742 TMC4 chr19 54673349 Exonic hg19 NA DQ656026 Out-of-frame Inter-chr q21.31 106731 ChimerSeq ChiTaRs ChiTaRs METAP1D-YAP1 METAP1D chr2 172944922 YAP1 chr11 102020541 Exonic hg19 NA BQ370439 Out-of-frame Inter-chr q31.1 q22.1 Tumor suppressor gene 106732 ChimerSeq ChiTaRs ChiTaRs MDC1-MDC1 MDC1 chr6 2005816 MDC1 chr6 1964947 Exonic hg19 NA AA424874 Out-of-frame Intra-chr Tumor suppressor gene Tumor suppressor gene 106733 ChimerSeq ChiTaRs ChiTaRs ATXN1-NEDD4L ATXN1 chr6 16429434 NEDD4L chr18 56042267 Exonic hg19 NA BG983407 Out-of-frame Inter-chr p22.3 q21.31 Tumor suppressor gene 106734 ChimerSeq ChiTaRs ChiTaRs MXD3-EME2 MXD3 chr5 176734292 EME2 chr16 1825879 Exonic hg19 NA AI218273 Out-of-frame Inter-chr q35.3 Transcription factor p13.3 106735 ChimerSeq ChiTaRs ChiTaRs HADH-NCL HADH chr4 108955491 NCL chr2 232321427 Exonic hg19 NA BQ314823 Out-of-frame Inter-chr q25 q37.1 106736 ChimerSeq ChiTaRs ChiTaRs FOXP1-FOXP1 FOXP1 chr3 71102926 FOXP1 chr3 71090477 Exonic hg19 NA BF447334 Out-of-frame Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor p13 Oncogene Tumor suppressor gene Transcription factor 106737 ChimerSeq ChiTaRs ChiTaRs PABPC1-MGEA5 PABPC1 chr8 101733929 MGEA5 chr10 103577939 Exonic hg19 NA AA731281 Out-of-frame Inter-chr q22.3 q24.32 106738 ChimerSeq ChiTaRs ChiTaRs TRA2B-GPX4 TRA2B chr3 185635176 GPX4 chr19 1105757 Exonic hg19 NA BF111779 Out-of-frame Inter-chr q27.2 p13.3 106739 ChimerSeq ChiTaRs ChiTaRs MCL1-GARS MCL1 chr1 150551754 GARS chr7 30671106 Exonic hg19 NA AI797617 Out-of-frame Inter-chr q21.2 Oncogene p14.3 106740 ChimerSeq ChiTaRs ChiTaRs CD74-PHC2 CD74 chr5 149792315 PHC2 chr1 33790065 Exonic hg19 NA DT218441 Out-of-frame Inter-chr q33.1 p35.1 106741 ChimerSeq ChiTaRs ChiTaRs MAN1A2-MAN1A2 MAN1A2 chr1 117944931 MAN1A2 chr1 117963196 Exonic hg19 NA AW801968 Out-of-frame Intra-chr p12 p12 106742 ChimerSeq ChiTaRs ChiTaRs CISH-CISH CISH chr3 50644814 CISH chr3 50644869 Exonic hg19 NA BE074580 Out-of-frame Intra-chr p21.2 p21.2 106743 ChimerSeq ChiTaRs ChiTaRs APBB1IP-ACTG1 APBB1IP chr10 26856540 ACTG1 chr17 79478281 Exonic hg19 NA BF879628 Out-of-frame Inter-chr p12.1 q25.3 106744 ChimerSeq ChiTaRs ChiTaRs HNRNPU-HNRNPU HNRNPU chr1 245020952 HNRNPU chr1 245020947 Exonic hg19 NA AA482733 Out-of-frame Intra-chr q44 q44 106745 ChimerSeq ChiTaRs ChiTaRs LOC100507266-LOC100507266 LOC100507266 chr4 4610059 LOC100507266 chr4 4610098 Exonic hg19 NA AW946409 Out-of-frame Intra-chr 106746 ChimerSeq ChiTaRs ChiTaRs AIG1-FAM3A AIG1 chr6 143661275 FAM3A chrX 153734502 Exonic hg19 NA BQ081920 Out-of-frame Inter-chr q24.2 q28 106747 ChimerSeq ChiTaRs ChiTaRs HHIPL2-NR1H2 HHIPL2 chr1 222715394 NR1H2 chr19 50881779 Exonic hg19 NA BE086059 Out-of-frame Inter-chr q41 q13.33 Transcription factor 106748 ChimerSeq ChiTaRs ChiTaRs MPHOSPH10-AES MPHOSPH10 chr2 71362792 AES chr19 3053161 Exonic hg19 NA BE835088 Out-of-frame Inter-chr p13.3 p13.3 106749 ChimerSeq ChiTaRs ChiTaRs CSDE1-ZNFX1 CSDE1 chr1 115262341 ZNFX1 chr20 47865356 Exonic hg19 NA DA635461 Out-of-frame Inter-chr p13.2 q13.13 106750 ChimerSeq ChiTaRs ChiTaRs ATP6V1G1-CSNK1D ATP6V1G1 chr9 117350153 CSNK1D chr17 80209312 Exonic hg19 NA DA444623 Out-of-frame Inter-chr q32 q25.3 106751 ChimerSeq ChiTaRs ChiTaRs CLU-MACF1 CLU chr8 27457337 MACF1 chr1 39808964 Exonic hg19 NA BF933391 Out-of-frame Inter-chr p21.1 Tumor suppressor gene p34.3 106752 ChimerSeq ChiTaRs ChiTaRs CELSR3-NCKIPSD CELSR3 chr3 48674951 NCKIPSD chr3 48720000 Exonic hg19 NA BF889346 Out-of-frame Intra-chr p21.31 p21.31 106753 ChimerSeq ChiTaRs ChiTaRs COL4A4-VPS26B COL4A4 chr2 227972900 VPS26B chr11 134116898 Exonic hg19 NA BF376481 Out-of-frame Inter-chr q36.3 q25 106754 ChimerSeq ChiTaRs ChiTaRs ACBD3-BOLA2 ACBD3 chr1 226374170 BOLA2 chr16 30096550 Exonic hg19 NA BQ017904 Out-of-frame Inter-chr q42.12 p11.2 106755 ChimerSeq ChiTaRs ChiTaRs GSK3B-INS-IGF2 GSK3B chr3 119542240 INS-IGF2 chr11 2181009 Exonic hg19 NA CK819499 Out-of-frame Inter-chr q13.33 CMGC:GSK Tumor suppressor gene p15.5 106756 ChimerSeq ChiTaRs ChiTaRs FTH1-FAM162A FTH1 chr11 61732093 FAM162A chr3 122126184 Exonic hg19 NA AW020886 Out-of-frame Inter-chr q12.3 q21.1 106757 ChimerSeq ChiTaRs ChiTaRs DGKZ-DGKZ DGKZ chr11 46397926 DGKZ chr11 46396812 Exonic hg19 NA AW889506 Out-of-frame Intra-chr p11.2 p11.2 106758 ChimerSeq ChiTaRs ChiTaRs PGM5-CTSL1 PGM5 chr9 71145688 CTSL1 chr9 90343628 Exonic hg19 NA BE836772 Out-of-frame Intra-chr q21.11 106759 ChimerSeq ChiTaRs ChiTaRs H19-COL1A1 H19 chr11 2019033 COL1A1 chr17 48263701 Exonic hg19 NA C16972 Out-of-frame Inter-chr p15.5 Tumor suppressor gene q21.33 Oncogene Seq+ 106760 ChimerSeq ChiTaRs ChiTaRs IK-RAB11FIP1 IK chr5 140039742 RAB11FIP1 chr8 37734800 Exonic hg19 NA BE935199 Out-of-frame Inter-chr q31.3 p11.23 106761 ChimerSeq ChiTaRs ChiTaRs NIPAL2-NIPAL2 NIPAL2 chr8 99306384 NIPAL2 chr8 99234806 Exonic hg19 NA AI081252 Out-of-frame Intra-chr q22.2 q22.2 106762 ChimerSeq ChiTaRs ChiTaRs DCBLD2-TXNRD3 DCBLD2 chr3 98620071 TXNRD3 chr3 126362856 Exonic hg19 NA AA460989 Out-of-frame Intra-chr q12.1 q21.3 106763 ChimerSeq ChiTaRs ChiTaRs EIF4E2-LOC100507412 EIF4E2 chr2 233422653 LOC100507412 chr? 110007 Exonic hg19 NA BE170217 Out-of-frame Inter-chr q37.1 106764 ChimerSeq ChiTaRs ChiTaRs ARID1A-ARID1A ARID1A chr1 27106685 ARID1A chr1 27106589 Exonic hg19 NA CV314170 Out-of-frame Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 Oncogene Tumor suppressor gene 106765 ChimerSeq ChiTaRs ChiTaRs PCGF1-C1S PCGF1 chr2 74734193 C1S chr12 7177439 Exonic hg19 NA BE939795 Out-of-frame Inter-chr p13.1 p13.31 106766 ChimerSeq ChiTaRs ChiTaRs LPP-GNL2 LPP chr3 187928878 GNL2 chr1 38034724 Exonic hg19 NA BE837684 Out-of-frame Inter-chr q27.3 Oncogene p34.3 106767 ChimerSeq ChiTaRs ChiTaRs LAPTM4A-NACC1 LAPTM4A chr2 20251410 NACC1 chr19 13248085 Exonic hg19 NA BG011582 Out-of-frame Inter-chr p24.1 p13.13 106768 ChimerSeq ChiTaRs ChiTaRs STEAP3-PTK7 STEAP3 chr2 120003550 PTK7 chr6 43100233 Exonic hg19 NA BP288114 Out-of-frame Inter-chr q14.2 p21.1 106769 ChimerSeq ChiTaRs ChiTaRs CD44-PDHX CD44 chr11 35160921 PDHX chr11 34952950 Exonic hg19 NA DA471107 Out-of-frame Intra-chr p13 Oncogene Tumor suppressor gene p13 Seq+ 106770 ChimerSeq ChiTaRs ChiTaRs RAB11FIP1-RAB11FIP1 RAB11FIP1 chr8 37734880 RAB11FIP1 chr8 37732778 Exonic hg19 NA CA314282 Out-of-frame Intra-chr p11.23 p11.23 106771 ChimerSeq ChiTaRs ChiTaRs PARP14-PARP14 PARP14 chr3 122439228 PARP14 chr3 122419717 Exonic hg19 NA AK026003 Out-of-frame Intra-chr q21.1 q21.1 106772 ChimerSeq ChiTaRs ChiTaRs TUFT1-RNF115 TUFT1 chr1 151512903 RNF115 chr1 145646114 Exonic hg19 NA CB137162 Out-of-frame Intra-chr q21.3 q21.1 106773 ChimerSeq ChiTaRs ChiTaRs EBF1-SCAF1 EBF1 chr5 158139288 SCAF1 chr19 50157968 Exonic hg19 NA BF820693 Out-of-frame Inter-chr q33.3 Transcription factor q13.33 106774 ChimerSeq ChiTaRs ChiTaRs TMCC2-TMCC2 TMCC2 chr1 205241298 TMCC2 chr1 205240322 Exonic hg19 NA BM466472 Out-of-frame Intra-chr q32.1 q32.1 106775 ChimerSeq ChiTaRs ChiTaRs FBXO41-MICALL2 FBXO41 chr2 73490939 MICALL2 chr7 1474244 Exonic hg19 NA BE939832 Out-of-frame Inter-chr p13.2 p22.3 106776 ChimerSeq ChiTaRs ChiTaRs MUC1-MUC1 MUC1 chr1 155160832 MUC1 chr1 155160884 Exonic hg19 NA BF759082 Out-of-frame Intra-chr q22 Oncogene q22 Oncogene 106777 ChimerSeq ChiTaRs ChiTaRs PRKDC-PRKDC PRKDC chr8 48685753 PRKDC chr8 48685672 Exonic hg19 NA BE548041 Out-of-frame Intra-chr q11.21 Oncogene q11.21 Oncogene 106778 ChimerSeq ChiTaRs ChiTaRs EYA1-EYA1 EYA1 chr8 72229926 EYA1 chr8 72211280 Exonic hg19 NA BI017781 Out-of-frame Intra-chr q13.3 q13.3 106779 ChimerSeq ChiTaRs ChiTaRs QSOX1-QSOX1 QSOX1 chr1 180148018 QSOX1 chr1 180151317 Exonic hg19 NA CF124944 Out-of-frame Intra-chr q25.2 q25.2 106780 ChimerSeq ChiTaRs ChiTaRs ZNF3-FZD2 ZNF3 chr7 99673144 FZD2 chr17 42636342 Exonic hg19 NA CN408382 Out-of-frame Inter-chr q22.1 Transcription factor q21.31 106781 ChimerSeq ChiTaRs ChiTaRs PODXL-C5orf38 PODXL chr7 131241314 C5orf38 chr5 2755244 Exonic hg19 NA CN290660 Out-of-frame Inter-chr q32.3 p15.33 106782 ChimerSeq ChiTaRs ChiTaRs TPM2-TPM2 TPM2 chr9 35685730 TPM2 chr9 35685428 Exonic hg19 NA BP232903 Out-of-frame Intra-chr p13.3 p13.3 106783 ChimerSeq ChiTaRs ChiTaRs DBNL-ATOX1 DBNL chr7 44092492 ATOX1 chr5 151125996 Exonic hg19 NA AI079775 Out-of-frame Inter-chr p13 q33.1 106784 ChimerSeq ChiTaRs ChiTaRs SCARA3-MCM7 SCARA3 chr8 27530191 MCM7 chr7 99691826 Exonic hg19 NA BI036859 Out-of-frame Inter-chr p21.1 q22.1 106785 ChimerSeq ChiTaRs ChiTaRs DYNC1LI1-DYNC1LI1 DYNC1LI1 chr3 32569970 DYNC1LI1 chr3 32568247 Exonic hg19 NA AA483540 Out-of-frame Intra-chr p22.3 p22.3 106786 ChimerSeq ChiTaRs ChiTaRs IWS1-IWS1 IWS1 chr2 128262336 IWS1 chr2 128261057 Exonic hg19 NA BF746935 Out-of-frame Intra-chr q14.3 q14.3 106787 ChimerSeq ChiTaRs ChiTaRs HIST1H3B-IL10RB HIST1H3B chr6 26032327 IL10RB chr21 34638672 Exonic hg19 NA DB110714 Out-of-frame Inter-chr p22.2 Oncogene q22.11 106788 ChimerSeq ChiTaRs ChiTaRs ACTB-ISY1-RAB43 ACTB chr7 5568077 ISY1-RAB43 chr3 128849393 Exonic hg19 NA BG874502 Out-of-frame Inter-chr p22.1 q21.3 106789 ChimerSeq ChiTaRs ChiTaRs PRPS1-TMEM91 PRPS1 chrX 106871888 TMEM91 chr19 41889937 Exonic hg19 NA BM553232 Out-of-frame Inter-chr q22.3 q13.2 106790 ChimerSeq ChiTaRs ChiTaRs AGBL5-PFAS AGBL5 chr2 27293467 PFAS chr17 8157319 Exonic hg19 NA BF985017 Out-of-frame Inter-chr p23.3 p13.1 106791 ChimerSeq ChiTaRs ChiTaRs CDC42-KIAA0319L CDC42 chr1 22379237 KIAA0319L chr1 35925935 Exonic hg19 NA DA531347 Out-of-frame Intra-chr p36.12 p34.3 106792 ChimerSeq ChiTaRs ChiTaRs SYTL1-SYTL1 SYTL1 chr1 27676527 SYTL1 chr1 27679956 Exonic hg19 NA BF871597 Out-of-frame Intra-chr p36.11 p36.11 106793 ChimerSeq ChiTaRs ChiTaRs AP3B1-AP3B1 AP3B1 chr5 77298349 AP3B1 chr5 77298437 Exonic hg19 NA CB242562 Out-of-frame Intra-chr q14.1 q14.1 106794 ChimerSeq ChiTaRs ChiTaRs TMOD1-AGPAT3 TMOD1 chr9 100353676 AGPAT3 chr21 45302061 Exonic hg19 NA BF955600 Out-of-frame Inter-chr q22.33 q22.3 106795 ChimerSeq ChiTaRs ChiTaRs HNRNPU-EMG1 HNRNPU chr1 245019348 EMG1 chr12 7086410 Exonic hg19 NA AA367420 Out-of-frame Inter-chr q44 p13.31 106796 ChimerSeq ChiTaRs ChiTaRs SHISA5-GOLGA3 SHISA5 chr3 48514532 GOLGA3 chr12 133402281 Exonic hg19 NA BE535541 Out-of-frame Inter-chr p21.31 q24.33 106797 ChimerSeq ChiTaRs ChiTaRs CAV2-FAM189B CAV2 chr7 116139901 FAM189B chr1 155220546 Exonic hg19 NA AI091384 Out-of-frame Inter-chr q31.2 106798 ChimerSeq ChiTaRs ChiTaRs FNIP2-JAG2 FNIP2 chr4 159750868 JAG2 chr14 105612291 Exonic hg19 NA AW368093 Out-of-frame Inter-chr q32.1 q32.33 106799 ChimerSeq ChiTaRs ChiTaRs FNDC3B-FNDC3B FNDC3B chr3 171965428 FNDC3B chr3 171969251 Exonic hg19 NA BE082950 Out-of-frame Intra-chr q26.31 q26.31 106800 ChimerSeq ChiTaRs ChiTaRs ABLIM1-MAPRE1 ABLIM1 chr10 116527984 MAPRE1 chr20 31413729 Exonic hg19 NA DA271767 Out-of-frame Inter-chr q25.3 q11.21 106801 ChimerSeq ChiTaRs ChiTaRs MPHOSPH10-AES MPHOSPH10 chr2 71362796 AES chr19 3053161 Exonic hg19 NA BE835146 Out-of-frame Inter-chr p13.3 p13.3 106802 ChimerSeq ChiTaRs ChiTaRs C7orf50-CTTN C7orf50 chr7 1166387 CTTN chr11 70266526 Exonic hg19 NA BE933929 Out-of-frame Inter-chr p22.3 q13.3 106803 ChimerSeq ChiTaRs ChiTaRs PTPN18-TUBA1B PTPN18 chr2 131132563 TUBA1B chr12 49521691 Exonic hg19 NA BE143246 Out-of-frame Inter-chr q21.1 q13.12 106804 ChimerSeq ChiTaRs ChiTaRs E2F5-BCL11A E2F5 chr8 86089891 BCL11A chr2 60689186 Exonic hg19 NA BE676586 Out-of-frame Inter-chr q21.2 Transcription factor p16.1 Oncogene Transcription factor 106805 ChimerSeq ChiTaRs ChiTaRs MLLT10-PICALM MLLT10 chr10 21823733 PICALM chr11 85670030 Exonic hg19 NA AF060928 CDS-3'UTR Inter-chr p12.31 Oncogene q14.2 KB Pub Seq+ 106806 ChimerSeq ChiTaRs ChiTaRs STMN1-CSMD2 STMN1 chr1 26228131 CSMD2 chr1 34376199 Exonic hg19 NA M85468 Out-of-frame Intra-chr p36.11 p35.1 106807 ChimerSeq ChiTaRs ChiTaRs EHMT1-EHMT1 EHMT1 chr9 140611429 EHMT1 chr9 140611522 Exonic hg19 NA BQ370417 Out-of-frame Intra-chr q34.3 q34.3 106808 ChimerSeq ChiTaRs ChiTaRs COL3A1-COL3A1 COL3A1 chr2 189870139 COL3A1 chr2 189870134 Exonic hg19 NA CN367365 Out-of-frame Intra-chr q32.2 q32.2 106809 ChimerSeq ChiTaRs ChiTaRs LAMB2-RAB1B LAMB2 chr3 49158954 RAB1B chr11 66043914 Exonic hg19 NA BE714888 Out-of-frame Inter-chr p21.31 q13.2 106810 ChimerSeq ChiTaRs ChiTaRs FLNA-FLNA FLNA chrX 153583406 FLNA chrX 153583415 Exonic hg19 NA BF925922 Out-of-frame Intra-chr q28 Tumor suppressor gene q28 Tumor suppressor gene 106811 ChimerSeq ChiTaRs ChiTaRs HNRNPA2B1-SHB HNRNPA2B1 chr7 26235530 SHB chr9 38049039 Exonic hg19 NA BF914958 Out-of-frame Inter-chr p15.2 p13.1 106812 ChimerSeq ChiTaRs ChiTaRs SLC25A37-ELF1 SLC25A37 chr8 23429103 ELF1 chr13 41517102 Exonic hg19 NA BF446092 Out-of-frame Inter-chr p21.2 q14.11 Transcription factor 106813 ChimerSeq ChiTaRs ChiTaRs NFE2L2-HNRNPD NFE2L2 chr2 178096506 HNRNPD chr4 83275272 Exonic hg19 NA BF096106 Out-of-frame Inter-chr q31.2 Oncogene Transcription factor q21.22 106814 ChimerSeq ChiTaRs ChiTaRs FBXL15-EGR1 FBXL15 chr10 104182893 EGR1 chr5 137803056 Exonic hg19 NA AI681329 3'UTR-CDS Inter-chr q24.32 q31.2 Tumor suppressor gene Transcription factor 106815 ChimerSeq ChiTaRs ChiTaRs CACNA1F-CACNA1F CACNA1F chrX 49061705 CACNA1F chrX 49061711 Exonic hg19 NA CK299179 Out-of-frame Intra-chr p11.23 p11.23 106816 ChimerSeq ChiTaRs ChiTaRs PLEKHM3-KIF5A PLEKHM3 chr2 208773287 KIF5A chr12 57957889 Exonic hg19 NA BQ340375 Out-of-frame Inter-chr q33.3 q13.3 106817 ChimerSeq ChiTaRs ChiTaRs ABI1-CLMN ABI1 chr10 27149913 CLMN chr14 95670643 Exonic hg19 NA DB121318 Out-of-frame Inter-chr p12.1 q32.13 106818 ChimerSeq ChiTaRs ChiTaRs PCBP1-B2M PCBP1 chr2 70315729 B2M chr15 45010026 Exonic hg19 NA AW375728 Out-of-frame Inter-chr p13.3 Oncogene 106819 ChimerSeq ChiTaRs ChiTaRs WDR74-TAPBPL WDR74 chr11 62609281 TAPBPL chr12 6561272 Exonic hg19 NA DA465939 Out-of-frame Inter-chr q12.3 p13.31 106820 ChimerSeq ChiTaRs ChiTaRs INTS3-GBF1 INTS3 chr1 153742752 GBF1 chr10 104128176 Exonic hg19 NA BE939808 Out-of-frame Inter-chr q21.3 q24.32 106821 ChimerSeq ChiTaRs ChiTaRs SPTBN1-SERPINB1 SPTBN1 chr2 54856271 SERPINB1 chr6 2840701 Exonic hg19 NA AI861956 Out-of-frame Inter-chr p16.2 Tumor suppressor gene p25.2 106822 ChimerSeq ChiTaRs ChiTaRs IPO9-ZBTB44 IPO9 chr1 201845101 ZBTB44 chr11 130165573 Exonic hg19 NA AW366675 Out-of-frame Inter-chr q32.1 q24.3 Transcription factor 106823 ChimerSeq ChiTaRs ChiTaRs HNRNPUL2-NRSN2 HNRNPUL2 chr11 62482283 NRSN2 chr20 333856 Exonic hg19 NA AI199579 Out-of-frame Inter-chr q12.3 p13 Tumor suppressor gene 106824 ChimerSeq ChiTaRs ChiTaRs SFPQ-SFPQ SFPQ chr1 35656157 SFPQ chr1 35653641 Exonic hg19 NA BF089022 Out-of-frame Intra-chr p34.3 p34.3 106825 ChimerSeq ChiTaRs ChiTaRs ENAH-ENAH ENAH chr1 225707110 ENAH chr1 225755036 Exonic hg19 NA BF802940 Out-of-frame Intra-chr q42.12 q42.12 106826 ChimerSeq ChiTaRs ChiTaRs DANCR-RNF31 DANCR chr4 53579128 RNF31 chr14 24624160 Exonic hg19 NA CN344563 Out-of-frame Inter-chr q12 q12 106827 ChimerSeq ChiTaRs ChiTaRs ABI1-BIN2 ABI1 chr10 27043608 BIN2 chr12 51674854 Exonic hg19 NA BI024013 Out-of-frame Inter-chr p12.1 q13.13 106828 ChimerSeq ChiTaRs ChiTaRs ZNF638-RAX ZNF638 chr2 71650579 RAX chr18 56934267 Exonic hg19 NA CN414592 Out-of-frame Inter-chr p13.3 q21.32 Transcription factor 106829 ChimerSeq ChiTaRs ChiTaRs ZNF696-ZC3H3 ZNF696 chr8 144375236 ZC3H3 chr8 144523123 Exonic hg19 NA CV030299 Out-of-frame Intra-chr q24.3 Transcription factor 106830 ChimerSeq ChiTaRs ChiTaRs IVNS1ABP-SF3B2 IVNS1ABP chr1 185268917 SF3B2 chr11 65829373 Exonic hg19 NA AW603024 Out-of-frame Inter-chr q25.3 q13.1 106831 ChimerSeq ChiTaRs ChiTaRs HK1-HK1 HK1 chr10 71161605 HK1 chr10 71161318 Exonic hg19 NA AW841510 Out-of-frame Intra-chr q22.1 q22.1 106832 ChimerSeq ChiTaRs ChiTaRs IGJ-SPPL2B IGJ chr4 71527897 SPPL2B chr19 2353883 Exonic hg19 NA BP221675 Out-of-frame Inter-chr p13.3 106833 ChimerSeq ChiTaRs ChiTaRs IFITM2-HNRNPM IFITM2 chr11 309147 HNRNPM chr19 8550628 Exonic hg19 NA CN431814 Out-of-frame Inter-chr p15.5 p13.2 106834 ChimerSeq ChiTaRs ChiTaRs LBH-SMCR8 LBH chr2 30480911 SMCR8 chr17 18228687 Exonic hg19 NA BE705933 Out-of-frame Inter-chr p23.1 106835 ChimerSeq ChiTaRs ChiTaRs YY1AP1-MLXIP YY1AP1 chr1 155630516 MLXIP chr12 122617811 Exonic hg19 NA BI004450 Out-of-frame Inter-chr q22 Transcription factor 106836 ChimerSeq ChiTaRs ChiTaRs TONSL-FLJ22184 TONSL chr8 145665479 FLJ22184 chr19 7934921 Exonic hg19 NA BG474073 Out-of-frame Inter-chr q24.3 106837 ChimerSeq ChiTaRs ChiTaRs TKT-TKT TKT chr3 53262347 TKT chr3 53259918 Exonic hg19 NA BF349570 Out-of-frame Intra-chr p21.1 Tumor suppressor gene p21.1 Tumor suppressor gene 106838 ChimerSeq ChiTaRs ChiTaRs DOCK1-DOCK1 DOCK1 chr10 128904565 DOCK1 chr10 128851061 Exonic hg19 NA BE930060 Out-of-frame Intra-chr q26.2 q26.2 106839 ChimerSeq ChiTaRs ChiTaRs ZKSCAN1-ZKSCAN1 ZKSCAN1 chr7 99629278 ZKSCAN1 chr7 99630023 Exonic hg19 NA AW075417 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Transcription factor 106840 ChimerSeq ChiTaRs ChiTaRs TMSB10-TMSB10 TMSB10 chr2 85133736 TMSB10 chr2 85133727 Exonic hg19 NA AA642818 Out-of-frame Intra-chr p11.2 p11.2 106841 ChimerSeq ChiTaRs ChiTaRs LAPTM5-PHF16 LAPTM5 chr1 31221932 PHF16 chrX 46808709 Exonic hg19 NA BE501410 Out-of-frame Inter-chr p35.2 106842 ChimerSeq ChiTaRs ChiTaRs CDKL5-SH3KBP1 CDKL5 chrX 18443816 SH3KBP1 chrX 19587230 Exonic hg19 NA DA670155 Out-of-frame Intra-chr p22.13 CMGC:CDKL p22.12 106843 ChimerSeq ChiTaRs ChiTaRs C1orf21-ANKLE2 C1orf21 chr1 184356466 ANKLE2 chr12 133331382 Exonic hg19 NA AI201468 Out-of-frame Inter-chr q25.3 q24.33 106844 ChimerSeq ChiTaRs ChiTaRs APEH-APEH APEH chr3 49720829 APEH chr3 49719723 Exonic hg19 NA AA639921 Out-of-frame Intra-chr p21.31 p21.31 106845 ChimerSeq ChiTaRs ChiTaRs S100A2-SGK223 S100A2 chr1 153533877 SGK223 chr8 8175298 Exonic hg19 NA CA313696 Out-of-frame Inter-chr q21.3 Tumor suppressor gene 106846 ChimerSeq ChiTaRs ChiTaRs RAPGEF1-WNK1 RAPGEF1 chr9 134470915 WNK1 chr12 1019356 Exonic hg19 NA BE836721 Out-of-frame Inter-chr q34.13 p13.33 106847 ChimerSeq ChiTaRs ChiTaRs EIF4G1-EIF4G1 EIF4G1 chr3 184045120 EIF4G1 chr3 184039685 Exonic hg19 NA BF734084 Out-of-frame Intra-chr q27.1 q27.1 106848 ChimerSeq ChiTaRs ChiTaRs CNPY3-RBCK1 CNPY3 chr6 42906786 RBCK1 chr20 409593 Exonic hg19 NA BF760706 Out-of-frame Inter-chr p21.1 p13 Transcription factor 106849 ChimerSeq ChiTaRs ChiTaRs HLA-DPB1-HLA-DPB1 HLA-DPB1 chr6 4533499 HLA-DPB1 chr6 4529136 Exonic hg19 NA BF929236 Out-of-frame Intra-chr 106850 ChimerSeq ChiTaRs ChiTaRs ACOT7-ZCCHC24 ACOT7 chr1 6445576 ZCCHC24 chr10 81142811 Exonic hg19 NA AI366331 Out-of-frame Inter-chr p36.31 q22.3 106851 ChimerSeq ChiTaRs ChiTaRs CAPZB-CAPZB CAPZB chr1 19665720 CAPZB chr1 19665451 Exonic hg19 NA AW292885 Out-of-frame Intra-chr p36.13 p36.13 106852 ChimerSeq ChiTaRs ChiTaRs IDUA-IDUA IDUA chr4 997176 IDUA chr4 997823 Exonic hg19 NA AW136332 Out-of-frame Intra-chr p16.3 p16.3 106853 ChimerSeq ChiTaRs ChiTaRs GLYCTK-PSG3 GLYCTK chr3 52327487 PSG3 chr19 43262184 Exonic hg19 NA BU752122 Out-of-frame Inter-chr p21.2 q13.2 106854 ChimerSeq ChiTaRs ChiTaRs EYA1-EYA1 EYA1 chr8 72246411 EYA1 chr8 72211282 Exonic hg19 NA BF951576 Out-of-frame Intra-chr q13.3 q13.3 106855 ChimerSeq ChiTaRs ChiTaRs SWAP70-TXLNA SWAP70 chr11 9754257 TXLNA chr1 32659681 Exonic hg19 NA BG015280 In-Frame Inter-chr p15.4 p35.2 106856 ChimerSeq ChiTaRs ChiTaRs LCN2-NAPRT1 LCN2 chr9 130915728 NAPRT1 chr8 144658825 Exonic hg19 NA AA612667 Out-of-frame Inter-chr q34.11 106857 ChimerSeq ChiTaRs ChiTaRs GOLGA1-ITGB3 GOLGA1 chr9 127642395 ITGB3 chr17 45335169 Exonic hg19 NA BI059143 Out-of-frame Inter-chr q33.3 q21.32 Oncogene Tumor suppressor gene 106858 ChimerSeq ChiTaRs ChiTaRs GABBR2-AGT GABBR2 chr9 101051878 AGT chr1 230846160 Exonic hg19 NA DA142897 Out-of-frame Inter-chr q22.33 q42.2 106859 ChimerSeq ChiTaRs ChiTaRs MARCH6-ZFAND3 2006_ 3_ 1_ chr5 10354029 ZFAND3 chr6 38029367 Exonic hg19 NA DB151625 Out-of-frame Inter-chr p21.2 106860 ChimerSeq ChiTaRs ChiTaRs DNAJC21-TMED9 DNAJC21 chr5 34945131 TMED9 chr5 177023030 Exonic hg19 NA BM794419 Out-of-frame Intra-chr p13.2 q35.3 106861 ChimerSeq ChiTaRs ChiTaRs HIATL1-HIATL1 HIATL1 chr9 97223137 HIATL1 chr9 97223129 Exonic hg19 NA AW438413 Out-of-frame Intra-chr 106862 ChimerSeq ChiTaRs ChiTaRs FGB-FGB FGB chr4 155491723 FGB chr4 155488755 Exonic hg19 NA AI065122 Out-of-frame Intra-chr q31.3 q31.3 106863 ChimerSeq ChiTaRs ChiTaRs BNIP3L-PMP22 BNIP3L chr8 26268508 PMP22 chr17 15134169 Exonic hg19 NA AI081942 Out-of-frame Inter-chr p21.2 Tumor suppressor gene p12 106864 ChimerSeq ChiTaRs ChiTaRs ZNF513-ZNF513 ZNF513 chr2 27603583 ZNF513 chr2 27600740 Exonic hg19 NA AI695170 Out-of-frame Intra-chr p23.3 Transcription factor p23.3 Transcription factor 106865 ChimerSeq ChiTaRs ChiTaRs ARHGAP4-ARHGAP4 ARHGAP4 chrX 153191215 ARHGAP4 chrX 153191254 Exonic hg19 NA EL583420 Out-of-frame Intra-chr q28 q28 106866 ChimerSeq ChiTaRs ChiTaRs LOC286442-CTTN LOC286442 chrX 39171850 CTTN chr11 70255326 Exonic hg19 NA BF955613 Out-of-frame Inter-chr q13.3 106867 ChimerSeq ChiTaRs ChiTaRs AK8-GPR107 AK8 chr9 135734568 GPR107 chr9 132898239 Exonic hg19 NA BF957859 Out-of-frame Intra-chr q34.13 q34.11 106868 ChimerSeq ChiTaRs ChiTaRs SARS-MVD SARS chr1 109780583 MVD chr16 88719798 Exonic hg19 NA BF958883 Out-of-frame Inter-chr p13.3 q24.2 106869 ChimerSeq ChiTaRs ChiTaRs GHITM-GHITM GHITM chr10 85902494 GHITM chr10 85903812 Exonic hg19 NA AU185081 Out-of-frame Intra-chr q23.1 q23.1 106870 ChimerSeq ChiTaRs ChiTaRs MTAP-MTAP MTAP chr9 21971017 MTAP chr9 21974715 Exonic hg19 NA CN365873 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.3 Tumor suppressor gene 106871 ChimerSeq ChiTaRs ChiTaRs EIF4G3-EIF4G3 EIF4G3 chr1 21191871 EIF4G3 chr1 21191078 Exonic hg19 NA BE004894 Out-of-frame Intra-chr p36.12 p36.12 106872 ChimerSeq ChiTaRs ChiTaRs ZMIZ2-THBS1 ZMIZ2 chr7 44804590 THBS1 chr15 39882146 Exonic hg19 NA AA078623 Out-of-frame Inter-chr p13 q14 Oncogene Tumor suppressor gene 106873 ChimerSeq ChiTaRs ChiTaRs GIGYF2-XRCC5 GIGYF2 chr2 233562103 XRCC5 chr2 216977736 Exonic hg19 NA DA473382 Out-of-frame Intra-chr q37.1 q35 Tumor suppressor gene 106874 ChimerSeq ChiTaRs ChiTaRs FOXP2-RPL36 FOXP2 chr7 113937300 RPL36 chr19 5691358 Exonic hg19 NA EC575727 Out-of-frame Inter-chr q31.1 Transcription factor p13.3 106875 ChimerSeq ChiTaRs ChiTaRs GALNT3-ABCA7 GALNT3 chr2 166611481 ABCA7 chr19 1056082 Exonic hg19 NA BF902896 Out-of-frame Inter-chr q24.3 p13.3 106876 ChimerSeq ChiTaRs ChiTaRs SNAP47-SNAP47 SNAP47 chr1 227935691 SNAP47 chr1 227935714 Exonic hg19 NA BF509540 Out-of-frame Intra-chr q42.13 q42.13 106877 ChimerSeq ChiTaRs ChiTaRs SDK1-SETD1A SDK1 chr7 4194875 SETD1A chr16 30975526 Exonic hg19 NA AW898510 Out-of-frame Inter-chr p22.2 p11.2 106878 ChimerSeq ChiTaRs ChiTaRs CYC1-C1QB CYC1 chr8 145151280 C1QB chr1 22987434 Exonic hg19 NA BI006405 Out-of-frame Inter-chr q24.3 p36.12 106879 ChimerSeq ChiTaRs ChiTaRs PRKCZ-CDC42BPG PRKCZ chr1 2075750 CDC42BPG chr11 64606275 Exonic hg19 NA BF994269 Out-of-frame Inter-chr p36.33 q13.1 106880 ChimerSeq ChiTaRs ChiTaRs EVC-CRMP1 EVC chr4 5837784 CRMP1 chr4 5857976 Exonic hg19 NA DA491731 Out-of-frame Intra-chr p16.2 p16.2 106881 ChimerSeq ChiTaRs ChiTaRs GLI3-GLI3 GLI3 chr7 42064924 GLI3 chr7 42088227 Exonic hg19 NA AA077306 Out-of-frame Intra-chr p14.1 Transcription factor p14.1 Transcription factor 106882 ChimerSeq ChiTaRs ChiTaRs GDI1-GDI1 GDI1 chrX 153671814 GDI1 chrX 153671550 Exonic hg19 NA AW163717 3'UTR-CDS Intra-chr q28 q28 106883 ChimerSeq ChiTaRs ChiTaRs FAM162A-FTH1 FAM162A chr3 122128794 FTH1 chr11 61732036 Exonic hg19 NA BI491844 Out-of-frame Inter-chr q21.1 q12.3 106884 ChimerSeq ChiTaRs ChiTaRs PSAP-CKB PSAP chr10 73577085 CKB chr14 103986228 Exonic hg19 NA AW176753 Out-of-frame Inter-chr q22.1 q32.33 106885 ChimerSeq ChiTaRs ChiTaRs KIF3A-FTL KIF3A chr5 132051545 FTL chr19 49468566 Exonic hg19 NA BP348036 Out-of-frame Inter-chr q31.1 q13.33 106886 ChimerSeq ChiTaRs ChiTaRs HDAC4-HDAC4 HDAC4 chr2 240215159 HDAC4 chr2 240214952 Exonic hg19 NA BF898228 Out-of-frame Intra-chr q37.3 q37.3 106887 ChimerSeq ChiTaRs ChiTaRs DAPK1-DAPK1 DAPK1 chr9 90140208 DAPK1 chr9 90139967 Exonic hg19 NA BF368862 Out-of-frame Intra-chr q21.33 CAMK:DAPK Tumor suppressor gene q21.33 CAMK:DAPK Tumor suppressor gene 106888 ChimerSeq ChiTaRs ChiTaRs HIST1H2BD-HIST1H2BD HIST1H2BD chr6 26171577 HIST1H2BD chr6 26171281 Exonic hg19 NA BU685333 Out-of-frame Intra-chr p22.2 p22.2 106889 ChimerSeq ChiTaRs ChiTaRs ENC1-GNAS ENC1 chr5 73936350 GNAS chr20 57470667 Exonic hg19 NA CB111624 Out-of-frame Inter-chr q13.3 q13.32 Oncogene 106890 ChimerSeq ChiTaRs ChiTaRs HMGB2-PTMA HMGB2 chr4 174255509 PTMA chr2 232576643 Exonic hg19 NA BM836871 5'UTR-CDS Inter-chr q34.1 q37.1 106891 ChimerSeq ChiTaRs ChiTaRs IP6K2-IP6K2 IP6K2 chr3 48725655 IP6K2 chr3 48725653 Exonic hg19 NA BF061229 Out-of-frame Intra-chr p21.31 p21.31 106892 ChimerSeq ChiTaRs ChiTaRs ZNF514-ZNF514 ZNF514 chr2 95823145 ZNF514 chr2 95823153 Exonic hg19 NA AW898939 Out-of-frame Intra-chr q11.1 Transcription factor q11.1 Transcription factor 106893 ChimerSeq ChiTaRs ChiTaRs WDR74-TRMT12 WDR74 chr11 62609153 TRMT12 chr8 125463301 Exonic hg19 NA DA345557 Out-of-frame Inter-chr q12.3 q24.13 106894 ChimerSeq ChiTaRs ChiTaRs IMMT-CDH1 IMMT chr2 86373324 CDH1 chr16 68868897 Exonic hg19 NA BE075539 Out-of-frame Inter-chr p11.2 q22.1 Oncogene Tumor suppressor gene 106895 ChimerSeq ChiTaRs ChiTaRs NCOA1-NCOA1 NCOA1 chr2 24930562 NCOA1 chr2 24930307 Exonic hg19 NA AW204594 Out-of-frame Intra-chr p23.3 Oncogene Transcription factor p23.3 Oncogene Transcription factor 106896 ChimerSeq ChiTaRs ChiTaRs NISCH-NISCH NISCH chr3 52521968 NISCH chr3 52522000 Exonic hg19 NA BE043073 Out-of-frame Intra-chr p21.1 p21.1 106897 ChimerSeq ChiTaRs ChiTaRs DPYSL3-SFTPB DPYSL3 chr5 146831387 SFTPB chr2 85886076 Exonic hg19 NA BF877189 Out-of-frame Inter-chr q32 p11.2 106898 ChimerSeq ChiTaRs ChiTaRs GPX3-NSMCE1 GPX3 chr5 150408290 NSMCE1 chr16 27238452 Exonic hg19 NA CV421185 Out-of-frame Inter-chr q33.1 Tumor suppressor gene p12.1 106899 ChimerSeq ChiTaRs ChiTaRs BPHL-BPHL BPHL chr6 3119054 BPHL chr6 3127582 Exonic hg19 NA AI222926 Out-of-frame Intra-chr p25.2 p25.2 106900 ChimerSeq ChiTaRs ChiTaRs RASAL2-RASAL2 RASAL2 chr1 178063613 RASAL2 chr1 178063657 Exonic hg19 NA CR747834 Out-of-frame Intra-chr q25.2 Tumor suppressor gene q25.2 Tumor suppressor gene 106901 ChimerSeq ChiTaRs ChiTaRs CLU-ZFAND2B CLU chr8 27462729 ZFAND2B chr2 220074017 Exonic hg19 NA BQ345093 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q35 106902 ChimerSeq ChiTaRs ChiTaRs BAG1-USP34 BAG1 chr9 33255092 USP34 chr2 61694016 Exonic hg19 NA AI471677 Out-of-frame Inter-chr p13.3 p15 106903 ChimerSeq ChiTaRs ChiTaRs BSN-HMP19 BSN chr3 49708764 HMP19 chr5 173535672 Exonic hg19 NA AW895028 Out-of-frame Inter-chr p21.31 q35.2 106904 ChimerSeq ChiTaRs ChiTaRs MRPS25-VAT1 MRPS25 chr3 15106759 VAT1 chr17 41168544 Exonic hg19 NA DA642154 Out-of-frame Inter-chr p25.1 q21.31 106905 ChimerSeq ChiTaRs ChiTaRs CIR1-FIP1L1 CIR1 chr2 175215440 FIP1L1 chr4 54244011 Exonic hg19 NA BF064126 Out-of-frame Inter-chr q31.1 q12 106906 ChimerSeq ChiTaRs ChiTaRs C8orf33-C8orf33 C8orf33 chr8 146278167 C8orf33 chr8 146278686 Exonic hg19 NA AI337158 Out-of-frame Intra-chr q24.3 q24.3 106907 ChimerSeq ChiTaRs ChiTaRs RHOB-CLPTM1 RHOB chr2 20648122 CLPTM1 chr19 45495560 Exonic hg19 NA BF855458 Out-of-frame Inter-chr p24.1 Tumor suppressor gene q13.32 106908 ChimerSeq ChiTaRs ChiTaRs KCNQ5-KCNQ5 KCNQ5 chr6 73904570 KCNQ5 chr6 73904449 Exonic hg19 NA CV342397 Out-of-frame Intra-chr q13 q13 106909 ChimerSeq ChiTaRs ChiTaRs CCDC34-CCDC34 CCDC34 chr11 27384554 CCDC34 chr11 27384556 Exonic hg19 NA BU675737 Out-of-frame Intra-chr p14.1 p14.1 106910 ChimerSeq ChiTaRs ChiTaRs ASB6-TMEM120A ASB6 chr9 132400899 TMEM120A chr7 75616367 Exonic hg19 NA AI940309 Out-of-frame Inter-chr q34.11 q11.23 106911 ChimerSeq ChiTaRs ChiTaRs CASK-CASK CASK chrX 41413071 CASK chrX 41393959 Exonic hg19 NA BF759957 Out-of-frame Intra-chr p11.4 CAMK:CASK p11.4 CAMK:CASK 106912 ChimerSeq ChiTaRs ChiTaRs CLINT1-CLINT1 CLINT1 chr5 157245972 CLINT1 chr5 157245782 Exonic hg19 NA CV350256 Out-of-frame Intra-chr q33.3 q33.3 106913 ChimerSeq ChiTaRs ChiTaRs TRAPPC2-KIAA1432 TRAPPC2 chrX 13752684 KIAA1432 chr9 5732386 Exonic hg19 NA DA216951 Out-of-frame Inter-chr p22.2 106914 ChimerSeq ChiTaRs ChiTaRs FTSJ2-NUMA1 FTSJ2 chr7 2275060 NUMA1 chr11 71729934 Exonic hg19 NA BF812115 Out-of-frame Inter-chr q13.4 Oncogene 106915 ChimerSeq ChiTaRs ChiTaRs GIMAP7-ZNF212 GIMAP7 chr7 150212033 ZNF212 chr7 148947248 Exonic hg19 NA BX482775 5'UTR-CDS Intra-chr q36.1 q36.1 Transcription factor 106916 ChimerSeq ChiTaRs ChiTaRs SEMA4G-SEMA4G SEMA4G chr10 102743160 SEMA4G chr10 102743193 Exonic hg19 NA BF897742 Out-of-frame Intra-chr q24.31 q24.31 106917 ChimerSeq ChiTaRs ChiTaRs EIF4G2-IFT46 EIF4G2 chr11 10821747 IFT46 chr11 118432165 Exonic hg19 NA BE927811 Out-of-frame Intra-chr p15.4 q23.3 106918 ChimerSeq ChiTaRs ChiTaRs GRHL2-SLC45A3 GRHL2 chr8 102505018 SLC45A3 chr1 205635953 Exonic hg19 NA DN916458 Out-of-frame Inter-chr q22.3 Transcription factor q32.1 106919 ChimerSeq ChiTaRs ChiTaRs XPO1-XPO1 XPO1 chr2 61724091 XPO1 chr2 61722680 Exonic hg19 NA AA559883 Out-of-frame Intra-chr p15 Oncogene p15 Oncogene 106920 ChimerSeq ChiTaRs ChiTaRs EGF-NEAT1 EGF chr4 110909761 NEAT1 chr11 65192917 Exonic hg19 NA BF806633 Out-of-frame Inter-chr q25 q13.1 106921 ChimerSeq ChiTaRs ChiTaRs PSMD2-HDAC10 PSMD2 chr3 184018173 HDAC10 chr22 50683616 Exonic hg19 NA CA336957 Out-of-frame Inter-chr q27.1 q13.33 106922 ChimerSeq ChiTaRs ChiTaRs DXO-CLK2 DXO chr6 3272711 CLK2 chr1 155239467 Exonic hg19 NA BJ992471 Out-of-frame Inter-chr q22 CMGC:CLK 106923 ChimerSeq ChiTaRs ChiTaRs PTGS1-NDRG1 PTGS1 chr9 125140732 NDRG1 chr8 134251081 Exonic hg19 NA AW899334 Out-of-frame Inter-chr q33.2 q24.22 Tumor suppressor gene 106924 ChimerSeq ChiTaRs ChiTaRs AGRN-TIMM50 AGRN chr1 978411 TIMM50 chr19 39978835 Exonic hg19 NA BF763267 Out-of-frame Inter-chr p36.33 q13.2 106925 ChimerSeq ChiTaRs ChiTaRs EIF3I-ST5 EIF3I chr1 32694172 ST5 chr11 8813443 Exonic hg19 NA BG566325 Out-of-frame Inter-chr p35.2 p15.4 Tumor suppressor gene 106926 ChimerSeq ChiTaRs ChiTaRs ADAMTS3-N4BP2L2 ADAMTS3 chr4 73284970 N4BP2L2 chr13 33091994 Exonic hg19 NA BI015489 Out-of-frame Inter-chr q13.3 q13.1 106927 ChimerSeq ChiTaRs ChiTaRs MAMLD1-MAMLD1 MAMLD1 chrX 149639047 MAMLD1 chrX 149680901 Exonic hg19 NA AI038626 Out-of-frame Intra-chr q28 q28 106928 ChimerSeq ChiTaRs ChiTaRs MTIF2-MTIF2 MTIF2 chr2 55470799 MTIF2 chr2 55470628 Exonic hg19 NA CA429337 Out-of-frame Intra-chr p16.1 p16.1 106929 ChimerSeq ChiTaRs ChiTaRs HAPLN2-HAPLN2 HAPLN2 chr1 156589612 HAPLN2 chr1 156589705 Exonic hg19 NA BF931070 Out-of-frame Intra-chr q23.1 q23.1 106930 ChimerSeq ChiTaRs ChiTaRs CSRP1-CSRP1 CSRP1 chr1 201458084 CSRP1 chr1 201458086 Exonic hg19 NA BF882820 Out-of-frame Intra-chr q32.1 q32.1 106931 ChimerSeq ChiTaRs ChiTaRs CTNNA3-PHTF2 CTNNA3 chr10 67836268 PHTF2 chr7 77491588 Exonic hg19 NA AJ557811 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q11.23 106932 ChimerSeq ChiTaRs ChiTaRs STXBP5-FAM126A STXBP5 chr6 147643746 FAM126A chr7 22985382 Exonic hg19 NA AA282281 Out-of-frame Inter-chr q24.3 p15.3 106933 ChimerSeq ChiTaRs ChiTaRs MAP3K6-MAP3K6 MAP3K6 chr1 27683102 MAP3K6 chr1 27683825 Exonic hg19 NA BM835919 Out-of-frame Intra-chr p36.11 STE:STE11 p36.11 STE:STE11 106934 ChimerSeq ChiTaRs ChiTaRs PSAP-PSAP PSAP chr10 73576362 PSAP chr10 73576365 Exonic hg19 NA BG236863 Out-of-frame Intra-chr q22.1 q22.1 106935 ChimerSeq ChiTaRs ChiTaRs CD74-NPIPB7 CD74 chr5 149792314 NPIPB7 chr16 28506595 Exonic hg19 NA DA620171 Out-of-frame Inter-chr q33.1 p12.1 106936 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-GSK3B INS-IGF2 chr11 2181059 GSK3B chr3 119542156 Exonic hg19 NA CK819498 Out-of-frame Inter-chr p15.5 q13.33 Oncogene 106937 ChimerSeq ChiTaRs ChiTaRs DEGS1-DMPK DEGS1 chr1 224377733 DMPK chr19 46283369 Exonic hg19 NA BF944194 Out-of-frame Inter-chr q42.11 q13.32 106938 ChimerSeq ChiTaRs ChiTaRs PDLIM7-PRRX1 PDLIM7 chr5 176917573 PRRX1 chr1 170638236 Exonic hg19 NA AW606517 Out-of-frame Inter-chr q35.3 q24.2 Transcription factor 106939 ChimerSeq ChiTaRs ChiTaRs GOLIM4-PMPCB GOLIM4 chr3 167761317 PMPCB chr7 102962511 Exonic hg19 NA BF229388 CDS-3'UTR Inter-chr q26.2 q22.1 106940 ChimerSeq ChiTaRs ChiTaRs IGFBP7-C12orf23 IGFBP7 chr4 57976551 C12orf23 chr12 107350859 Exonic hg19 NA DA661142 5'UTR-5'UTR Inter-chr q12 Tumor suppressor gene 106941 ChimerSeq ChiTaRs ChiTaRs AZGP1P1-DDIT4 AZGP1P1 chr7 99580876 DDIT4 chr10 74034947 Exonic hg19 NA BE772578 Out-of-frame Inter-chr q22.1 q22.1 106942 ChimerSeq ChiTaRs ChiTaRs EMILIN1-RPL3 EMILIN1 chr2 27301733 RPL3 chr22 39708889 Exonic hg19 NA CN268128 Out-of-frame Inter-chr p23.3 q13.1 106943 ChimerSeq ChiTaRs ChiTaRs TGS1-TGS1 TGS1 chr8 56715046 TGS1 chr8 56698833 Exonic hg19 NA DA490976 Out-of-frame Intra-chr q12.1 Tumor suppressor gene q12.1 Tumor suppressor gene 106944 ChimerSeq ChiTaRs ChiTaRs MEF2C-MEF2C MEF2C chr5 88027681 MEF2C chr5 88100462 Exonic hg19 NA N87151 Out-of-frame Intra-chr q14.3 Transcription factor q14.3 Transcription factor 106945 ChimerSeq ChiTaRs ChiTaRs TMEM50A-ZNF407 TMEM50A chr1 25667070 ZNF407 chr18 72421955 Exonic hg19 NA BE077374 Out-of-frame Inter-chr p36.11 q22.3 Transcription factor 106946 ChimerSeq ChiTaRs ChiTaRs PMPCA-RILPL1 PMPCA chr9 139317921 RILPL1 chr12 123984008 Exonic hg19 NA BF742244 Out-of-frame Inter-chr q34.3 q24.31 106947 ChimerSeq ChiTaRs ChiTaRs UBA1-LASP1 UBA1 chrX 47070290 LASP1 chr17 37056965 Exonic hg19 NA BE076043 Out-of-frame Inter-chr p11.3 q12 106948 ChimerSeq ChiTaRs ChiTaRs XPNPEP1-CHI3L1 XPNPEP1 chr10 111635350 CHI3L1 chr1 203148952 Exonic hg19 NA AW376261 Out-of-frame Inter-chr q25.1 q32.1 106949 ChimerSeq ChiTaRs ChiTaRs IRF6-IRF6 IRF6 chr1 209965766 IRF6 chr1 209963900 Exonic hg19 NA BF769897 Out-of-frame Intra-chr q32.2 Transcription factor q32.2 Transcription factor 106950 ChimerSeq ChiTaRs ChiTaRs ELN-TXNDC5 ELN chr7 73457034 TXNDC5 chr6 7904929 Exonic hg19 NA DA537387 Out-of-frame Inter-chr q11.23 p24.3 106951 ChimerSeq ChiTaRs ChiTaRs SEC31A-LRCH4 SEC31A chr4 83770072 LRCH4 chr7 100174335 Exonic hg19 NA BI052970 Out-of-frame Inter-chr q21.22 q22.1 106952 ChimerSeq ChiTaRs ChiTaRs HIST1H3F-HNRNPM HIST1H3F chr6 26250850 HNRNPM chr19 8520307 Exonic hg19 NA CN350528 Out-of-frame Inter-chr p22.2 p13.2 106953 ChimerSeq ChiTaRs ChiTaRs AGXT2L2-GPI AGXT2L2 chr5 177648114 GPI chr19 34859538 Exonic hg19 NA AW366833 Out-of-frame Inter-chr 106954 ChimerSeq ChiTaRs ChiTaRs CITED4-BIN2 CITED4 chr1 41326916 BIN2 chr12 51693394 Exonic hg19 NA AI344380 Out-of-frame Inter-chr p34.2 q13.13 106955 ChimerSeq ChiTaRs ChiTaRs PSIP1-MYL6 PSIP1 chr9 15474134 MYL6 chr12 56555275 Exonic hg19 NA CN267529 Out-of-frame Inter-chr p22.3 Oncogene q13.2 106956 ChimerSeq ChiTaRs ChiTaRs ALPP-PTPRU ALPP chr2 233247315 PTPRU chr1 29652757 Exonic hg19 NA AA368300 Out-of-frame Inter-chr q37.1 p35.3 106957 ChimerSeq ChiTaRs ChiTaRs NUP188-POLR2A NUP188 chr9 131768868 POLR2A chr17 7407022 Exonic hg19 NA BE819347 Out-of-frame Inter-chr q34.11 p13.1 106958 ChimerSeq ChiTaRs ChiTaRs ETV5-LOC284889 ETV5 chr3 185826875 LOC284889 chr22 24236644 Exonic hg19 NA BG826530 Out-of-frame Inter-chr q27.2 Oncogene Transcription factor 106959 ChimerSeq ChiTaRs ChiTaRs C7orf50-FLNA C7orf50 chr7 1106741 FLNA chrX 153593120 Exonic hg19 NA BF871816 Out-of-frame Inter-chr p22.3 q28 Tumor suppressor gene 106960 ChimerSeq ChiTaRs ChiTaRs ZBTB38-ZBTB38 ZBTB38 chr3 141163568 ZBTB38 chr3 141163152 Exonic hg19 NA BX955280 Out-of-frame Intra-chr q23 Transcription factor q23 Transcription factor 106961 ChimerSeq ChiTaRs ChiTaRs FADS1-FADS1 FADS1 chr11 61570587 FADS1 chr11 61569706 Exonic hg19 NA AW579368 Out-of-frame Intra-chr q12.2 q12.2 106962 ChimerSeq ChiTaRs ChiTaRs ELF3-ELF3 ELF3 chr1 201983002 ELF3 chr1 201983015 Exonic hg19 NA BF804203 Out-of-frame Intra-chr q32.1 Transcription factor q32.1 Transcription factor 106963 ChimerSeq ChiTaRs ChiTaRs MRPL14-MRPL14 MRPL14 chr6 44095124 MRPL14 chr6 44081524 Exonic hg19 NA AA434296 Out-of-frame Intra-chr p21.1 p21.1 106964 ChimerSeq ChiTaRs ChiTaRs ZHX2-DDX52 ZHX2 chr8 123794337 DDX52 chr17 35986840 Exonic hg19 NA DB040320 Out-of-frame Inter-chr q24.13 Tumor suppressor gene Transcription factor q12 106965 ChimerSeq ChiTaRs ChiTaRs PAM-PAM PAM chr5 102353090 PAM chr5 102353088 Exonic hg19 NA BM699806 Out-of-frame Intra-chr q21.1 q21.1 106966 ChimerSeq ChiTaRs ChiTaRs OSBPL5-OSBPL5 OSBPL5 chr11 3115049 OSBPL5 chr11 3114111 Exonic hg19 NA CB049069 Out-of-frame Intra-chr p15.4 p15.4 106967 ChimerSeq ChiTaRs ChiTaRs EIF2AK1-DBNL EIF2AK1 chr7 6063844 DBNL chr7 44085880 Exonic hg19 NA BF895041 Out-of-frame Intra-chr p22.1 p13 106968 ChimerSeq ChiTaRs ChiTaRs SDHB-SDHB SDHB chr1 17380473 SDHB chr1 17349203 Exonic hg19 NA CB157553 Out-of-frame Intra-chr p36.13 Oncogene Tumor suppressor gene p36.13 Oncogene Tumor suppressor gene 106969 ChimerSeq ChiTaRs ChiTaRs EIF3B-POLA2 EIF3B chr7 2419055 POLA2 chr11 65047202 Exonic hg19 NA BI010845 Out-of-frame Inter-chr p22.3 q13.1 106970 ChimerSeq ChiTaRs ChiTaRs MARCKSL1-PRKAR1B MARCKSL1 chr1 32800256 PRKAR1B chr7 678891 Exonic hg19 NA BI012593 Out-of-frame Inter-chr p35.1 p22.3 106971 ChimerSeq ChiTaRs ChiTaRs CAPN13-FKBP11 CAPN13 chr2 30945925 FKBP11 chr12 49317243 Exonic hg19 NA AW391785 Out-of-frame Inter-chr p23.1 q13.12 106972 ChimerSeq ChiTaRs ChiTaRs SORBS2-SORBS2 SORBS2 chr4 186508602 SORBS2 chr4 186508627 Exonic hg19 NA AI868078 Out-of-frame Intra-chr q35.1 q35.1 106973 ChimerSeq ChiTaRs ChiTaRs PADI4-PADI4 PADI4 chr1 17668594 PADI4 chr1 17664535 Exonic hg19 NA BI028809 Out-of-frame Intra-chr 106974 ChimerSeq ChiTaRs ChiTaRs TXNDC5-TXNDC5 TXNDC5 chr6 7882424 TXNDC5 chr6 7882447 Exonic hg19 NA BE142656 Out-of-frame Intra-chr p24.3 p24.3 106975 ChimerSeq ChiTaRs ChiTaRs BTF3-GGA1 BTF3 chr5 72794748 GGA1 chr22 38026981 Exonic hg19 NA DB454451 Out-of-frame Inter-chr q13.2 q13.1 106976 ChimerSeq ChiTaRs ChiTaRs ADCY5-GLIS1 ADCY5 chr3 123001452 GLIS1 chr1 53979559 Exonic hg19 NA BI037155 Out-of-frame Inter-chr q21.1 p32.3 Transcription factor 106977 ChimerSeq ChiTaRs ChiTaRs SYP-CPB1 SYP chrX 49054897 CPB1 chr3 148545668 Exonic hg19 NA BQ778546 Out-of-frame Inter-chr p11.23 q24 106978 ChimerSeq ChiTaRs ChiTaRs SCARB2-CYP19A1 SCARB2 chr4 77083006 CYP19A1 chr15 51519976 Exonic hg19 NA BF989796 Out-of-frame Inter-chr q21.1 q21.2 106979 ChimerSeq ChiTaRs ChiTaRs CDKL5-DGCR8 CDKL5 chrX 18443815 DGCR8 chr22 20093699 Exonic hg19 NA BI547806 5'UTR-CDS Inter-chr p22.13 CMGC:CDKL q11.21 106980 ChimerSeq ChiTaRs ChiTaRs FGFR1-FGFR1 FGFR1 chr8 38314976 FGFR1 chr8 38315028 Exonic hg19 NA CN333257 Out-of-frame Intra-chr p11.23 TK:FGFR Oncogene p11.23 TK:FGFR Oncogene 106981 ChimerSeq ChiTaRs ChiTaRs GSTM2-EVC2 GSTM2 chr1 110256544 EVC2 chr4 5671338 Exonic hg19 NA AW386100 Out-of-frame Inter-chr p13.3 p16.2 106982 ChimerSeq ChiTaRs ChiTaRs EEF1E1-DSC2 EEF1E1 chr6 8097547 DSC2 chr18 28660270 Exonic hg19 NA AW999030 Out-of-frame Inter-chr p24.3 Tumor suppressor gene q12.1 Tumor suppressor gene 106983 ChimerSeq ChiTaRs ChiTaRs USF1-MLLT6 USF1 chr1 161015760 MLLT6 chr17 36872848 Exonic hg19 NA DA117378 Out-of-frame Inter-chr q23.3 Transcription factor q12 106984 ChimerSeq ChiTaRs ChiTaRs NDRG1-ATP2A2 NDRG1 chr8 134251194 ATP2A2 chr12 110778557 Exonic hg19 NA BF917195 Out-of-frame Inter-chr q24.22 Tumor suppressor gene q24.11 106985 ChimerSeq ChiTaRs ChiTaRs H19-TCEA3 H19 chr11 2018315 TCEA3 chr1 23743586 Exonic hg19 NA BG008301 Out-of-frame Inter-chr p15.5 Tumor suppressor gene 106986 ChimerSeq ChiTaRs ChiTaRs APBB3-APBB3 APBB3 chr5 139941766 APBB3 chr5 139940984 Exonic hg19 NA BF737830 Out-of-frame Intra-chr q31.3 q31.3 106987 ChimerSeq ChiTaRs ChiTaRs IL6-LOC541472 IL6 chr7 22768386 LOC541472 chr7 22767173 Exonic hg19 NA BF927424 Out-of-frame Intra-chr p15.3 Oncogene 106988 ChimerSeq ChiTaRs ChiTaRs RPL10-MLL2 RPL10 chrX 153629254 MLL2 chr12 49435187 Exonic hg19 NA AI698719 Out-of-frame Inter-chr q28 Tumor suppressor gene 106989 ChimerSeq ChiTaRs ChiTaRs MZB1-ACTN4 MZB1 chr5 138723488 ACTN4 chr19 39220941 Exonic hg19 NA BM676806 Out-of-frame Inter-chr q31.2 Tumor suppressor gene 106990 ChimerSeq ChiTaRs ChiTaRs GNL3-COL3A1 GNL3 chr3 52727657 COL3A1 chr2 189870074 Exonic hg19 NA CN367458 Out-of-frame Inter-chr p21.1 q32.2 106991 ChimerSeq ChiTaRs ChiTaRs BTG2-BTG2 BTG2 chr1 203278217 BTG2 chr1 203277952 Exonic hg19 NA AW794369 Out-of-frame Intra-chr q32.1 Tumor suppressor gene q32.1 Tumor suppressor gene 106992 ChimerSeq ChiTaRs ChiTaRs HSF1-HSF1 HSF1 chr8 145515409 HSF1 chr8 145515468 Exonic hg19 NA AW016463 Out-of-frame Intra-chr q24.3 Transcription factor q24.3 Transcription factor 106993 ChimerSeq ChiTaRs ChiTaRs CD74-RPL29 CD74 chr5 149786889 RPL29 chr3 52029055 Exonic hg19 NA AW860778 Out-of-frame Inter-chr q33.1 p21.2 106994 ChimerSeq ChiTaRs ChiTaRs PBXIP1-FAIM2 PBXIP1 chr1 154918626 FAIM2 chr12 50264182 Exonic hg19 NA DR978508 Out-of-frame Inter-chr q21.3 q13.12 106995 ChimerSeq ChiTaRs ChiTaRs TMEM9-KIAA1522 TMEM9 chr1 201104926 KIAA1522 chr1 33237675 Exonic hg19 NA BE066321 Out-of-frame Intra-chr q32.1 p35.1 106996 ChimerSeq ChiTaRs ChiTaRs HDLBP-MACROD2 HDLBP chr2 242194545 MACROD2 chr20 15645698 Exonic hg19 NA BG984017 Out-of-frame Inter-chr q37.3 p12.1 106997 ChimerSeq ChiTaRs ChiTaRs UBR5-UBR5 UBR5 chr8 103373855 UBR5 chr8 103372297 Exonic hg19 NA BF154933 Out-of-frame Intra-chr q22.3 Oncogene q22.3 Oncogene 106998 ChimerSeq ChiTaRs ChiTaRs RAB3GAP1-RAB3GAP1 RAB3GAP1 chr2 135926332 RAB3GAP1 chr2 135922210 Exonic hg19 NA AW889018 Out-of-frame Intra-chr q21.3 q21.3 106999 ChimerSeq ChiTaRs ChiTaRs COL1A2-C1orf159 COL1A2 chr7 94056572 C1orf159 chr1 1044161 Exonic hg19 NA BE928186 Out-of-frame Inter-chr q21.3 p36.33 107000 ChimerSeq ChiTaRs ChiTaRs CUL1-CUL1 CUL1 chr7 148484065 CUL1 chr7 148483990 Exonic hg19 NA BE168218 Out-of-frame Intra-chr q36.1 Tumor suppressor gene q36.1 Tumor suppressor gene 107001 ChimerSeq ChiTaRs ChiTaRs MIR210HG-MIR210HG MIR210HG chr11 567407 MIR210HG chr11 567704 Exonic hg19 NA BE833199 Out-of-frame Intra-chr p15.5 p15.5 107002 ChimerSeq ChiTaRs ChiTaRs SEMA3F-SEMA3F SEMA3F chr3 50223336 SEMA3F chr3 50211338 Exonic hg19 NA BP320610 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene 107003 ChimerSeq ChiTaRs ChiTaRs MCL1-GARS MCL1 chr1 150551710 GARS chr7 30671106 Exonic hg19 NA AI962389 Out-of-frame Inter-chr q21.2 Oncogene p14.3 107004 ChimerSeq ChiTaRs ChiTaRs NCL-ASPH NCL chr2 232327939 ASPH chr8 62559309 Exonic hg19 NA BI005871 Out-of-frame Inter-chr q37.1 q12.3 107005 ChimerSeq ChiTaRs ChiTaRs COL3A1-CHST12 COL3A1 chr2 189870167 CHST12 chr7 2472625 Exonic hg19 NA CF127449 Out-of-frame Inter-chr q32.2 p22.3 107006 ChimerSeq ChiTaRs ChiTaRs DDR1-DDR1 DDR1 chr6 2155426 DDR1 chr6 2154126 Exonic hg19 NA AA862202 Out-of-frame Intra-chr TK:DDR TK:DDR 107007 ChimerSeq ChiTaRs ChiTaRs C10orf55-LOC100507412 C10orf55 chr10 75672809 LOC100507412 chr? 109565 Exonic hg19 NA BJ990133 Out-of-frame Inter-chr q22.2 107008 ChimerSeq ChiTaRs ChiTaRs ATP1A1-ATP1A1 ATP1A1 chr1 116932165 ATP1A1 chr1 116926658 Exonic hg19 NA BQ338264 Out-of-frame Intra-chr p13.1 p13.1 107009 ChimerSeq ChiTaRs ChiTaRs ZFR-PRKAR1B ZFR chr5 32444791 PRKAR1B chr7 750965 Exonic hg19 NA DA153624 5'UTR-CDS Inter-chr p13.3 p22.3 107010 ChimerSeq ChiTaRs ChiTaRs CFLAR-ECE1 CFLAR chr2 202002880 ECE1 chr1 21551817 Exonic hg19 NA BQ336177 Out-of-frame Inter-chr q33.1 p36.12 107011 ChimerSeq ChiTaRs ChiTaRs TMEM184A-TMEM184A TMEM184A chr7 1585415 TMEM184A chr7 1588179 Exonic hg19 NA AI216042 Out-of-frame Intra-chr p22.3 p22.3 107012 ChimerSeq ChiTaRs ChiTaRs ENO1-COL4A2 ENO1 chr1 8926485 COL4A2 chr13 111121594 Exonic hg19 NA AW362574 Out-of-frame Inter-chr p36.23 q34 107013 ChimerSeq ChiTaRs ChiTaRs EHMT1-EHMT1 EHMT1 chr9 140611527 EHMT1 chr9 140611522 Exonic hg19 NA BF997880 Out-of-frame Intra-chr q34.3 q34.3 107014 ChimerSeq ChiTaRs ChiTaRs LIPA-ATXN7 LIPA chr10 91098540 ATXN7 chr3 63903916 Exonic hg19 NA BE815363 Out-of-frame Inter-chr q23.31 p14.1 107015 ChimerSeq ChiTaRs ChiTaRs PEG10-PEG10 PEG10 chr7 94296714 PEG10 chr7 94296433 Exonic hg19 NA BE178987 Out-of-frame Intra-chr q21.3 q21.3 107016 ChimerSeq ChiTaRs ChiTaRs TTYH3-ING1 TTYH3 chr7 2688772 ING1 chr13 111371952 Exonic hg19 NA BF757166 Out-of-frame Inter-chr p22.3 q34 Tumor suppressor gene 107017 ChimerSeq ChiTaRs ChiTaRs H19-LRRC59 H19 chr11 2018855 LRRC59 chr17 48460004 Exonic hg19 NA AI110737 Out-of-frame Inter-chr p15.5 Tumor suppressor gene q21.33 107018 ChimerSeq ChiTaRs ChiTaRs COL3A1-CLU COL3A1 chr2 189876449 CLU chr8 27457499 Exonic hg19 NA CN367540 Out-of-frame Inter-chr q32.2 p21.1 Tumor suppressor gene 107019 ChimerSeq ChiTaRs ChiTaRs VCP-VCP VCP chr9 35060818 VCP chr9 35059683 Exonic hg19 NA AA557923 Out-of-frame Intra-chr p13.3 p13.3 107020 ChimerSeq ChiTaRs ChiTaRs SPARC-SPARC SPARC chr5 151042824 SPARC chr5 151042811 Exonic hg19 NA AA527011 Out-of-frame Intra-chr q33.1 Tumor suppressor gene q33.1 Tumor suppressor gene 107021 ChimerSeq ChiTaRs ChiTaRs ITGB1BP1-CPSF3 ITGB1BP1 chr2 9563820 CPSF3 chr2 9568892 Exonic hg19 NA DB012789 Out-of-frame Intra-chr p25.1 p25.1 107022 ChimerSeq ChiTaRs ChiTaRs ATP1A1-ATP1A1 ATP1A1 chr1 116941590 ATP1A1 chr1 116941258 Exonic hg19 NA BE695741 Out-of-frame Intra-chr p13.1 p13.1 107023 ChimerSeq ChiTaRs ChiTaRs ARID1A-ARID1A ARID1A chr1 27059283 ARID1A chr1 27056142 Exonic hg19 NA BF808164 In-Frame Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 Oncogene Tumor suppressor gene 107024 ChimerSeq ChiTaRs ChiTaRs RAI14-RAI14 RAI14 chr5 34793496 RAI14 chr5 34796042 Exonic hg19 NA AA558122 Out-of-frame Intra-chr p13.2 p13.2 107025 ChimerSeq ChiTaRs ChiTaRs PNPLA2-PNPLA2 PNPLA2 chr11 820922 PNPLA2 chr11 820923 Exonic hg19 NA BG960633 Out-of-frame Intra-chr p15.5 p15.5 107026 ChimerSeq ChiTaRs ChiTaRs CLIC1-CLIC1 CLIC1 chr6 3029456 CLIC1 chr6 3029191 Exonic hg19 NA AA587837 Out-of-frame Intra-chr 107027 ChimerSeq ChiTaRs ChiTaRs VPS13D-PITPNB VPS13D chr1 12516087 PITPNB chr22 28254431 Exonic hg19 NA BF741687 Out-of-frame Inter-chr p36.22 q12.1 107028 ChimerSeq ChiTaRs ChiTaRs ABCC10-PGBD5 ABCC10 chr6 43416882 PGBD5 chr1 230457694 Exonic hg19 NA BE718029 Out-of-frame Inter-chr p21.1 q42.13 107029 ChimerSeq ChiTaRs ChiTaRs TRIP6-TRIP6 TRIP6 chr7 100470365 TRIP6 chr7 100465180 Exonic hg19 NA BF736578 Out-of-frame Intra-chr q22.1 q22.1 107030 ChimerSeq ChiTaRs ChiTaRs MGC16121-SCD MGC16121 chrX 133680167 SCD chr10 102124431 Exonic hg19 NA DR979294 Out-of-frame Inter-chr q24.31 107031 ChimerSeq ChiTaRs ChiTaRs ZNF79-EVL ZNF79 chr9 130186906 EVL chr14 100599064 Exonic hg19 NA DA949545 Out-of-frame Inter-chr q33.3 Transcription factor q32.2 107032 ChimerSeq ChiTaRs ChiTaRs IGFBP3-SLC2A3 IGFBP3 chr7 45960873 SLC2A3 chr12 8075591 Exonic hg19 NA DA576628 Out-of-frame Inter-chr p12.3 Tumor suppressor gene p13.31 107033 ChimerSeq ChiTaRs ChiTaRs MPHOSPH10-AES MPHOSPH10 chr2 71362797 AES chr19 3053161 Exonic hg19 NA BQ371295 Out-of-frame Inter-chr p13.3 p13.3 107034 ChimerSeq ChiTaRs ChiTaRs EPHA5-MALAT1 EPHA5 chr4 66439426 MALAT1 chr11 65267162 Exonic hg19 NA DW462886 Out-of-frame Inter-chr q13.2 Oncogene q13.1 107035 ChimerSeq ChiTaRs ChiTaRs GSN-GSN GSN chr9 124065271 GSN chr9 124080697 Exonic hg19 NA BF896320 Out-of-frame Intra-chr q33.2 Tumor suppressor gene q33.2 Tumor suppressor gene 107036 ChimerSeq ChiTaRs ChiTaRs SELENBP1-SELENBP1 SELENBP1 chr1 151337524 SELENBP1 chr1 151337509 Exonic hg19 NA BF751733 Out-of-frame Intra-chr q21.3 Tumor suppressor gene q21.3 Tumor suppressor gene 107037 ChimerSeq ChiTaRs ChiTaRs PNPLA7-APOE PNPLA7 chr9 140375781 APOE chr19 45411087 Exonic hg19 NA BF887510 Out-of-frame Inter-chr q34.3 q13.32 107038 ChimerSeq ChiTaRs ChiTaRs STC2-STC2 STC2 chr5 172745042 STC2 chr5 172745087 Exonic hg19 NA AW604817 Out-of-frame Intra-chr q35.2 q35.2 107039 ChimerSeq ChiTaRs ChiTaRs TGFBI-TGFBI TGFBI chr5 135396556 TGFBI chr5 135389662 Exonic hg19 NA DA549106 Out-of-frame Intra-chr q31.1 Tumor suppressor gene q31.1 Tumor suppressor gene 107040 ChimerSeq ChiTaRs ChiTaRs FBXL18-FBXL18 FBXL18 chr7 5519977 FBXL18 chr7 5519978 Exonic hg19 NA AA077919 Out-of-frame Intra-chr p22.1 p22.1 107041 ChimerSeq ChiTaRs ChiTaRs TUBB4B-ITPRIP TUBB4B chr9 140137061 ITPRIP chr10 106073634 Exonic hg19 NA DA594703 Out-of-frame Inter-chr q34.3 q25.1 107042 ChimerSeq ChiTaRs ChiTaRs PHF3-PHF3 PHF3 chr6 64416659 PHF3 chr6 64416645 Exonic hg19 NA AI291151 Out-of-frame Intra-chr q12 q12 107043 ChimerSeq ChiTaRs ChiTaRs TTC21B-FKBP8 TTC21B chr2 166734343 FKBP8 chr19 18650471 Exonic hg19 NA DA370936 Out-of-frame Inter-chr q24.3 p13.11 107044 ChimerSeq ChiTaRs ChiTaRs STXBP5-FAM126A STXBP5 chr6 147643746 FAM126A chr7 22985317 Exonic hg19 NA AA290947 Out-of-frame Inter-chr q24.3 p15.3 107045 ChimerSeq ChiTaRs ChiTaRs BRPF3-N4BP2L2 BRPF3 chr6 36168573 N4BP2L2 chr13 33054696 Exonic hg19 NA BE930492 Out-of-frame Inter-chr p21.31 q13.1 107046 ChimerSeq ChiTaRs ChiTaRs GNB1-GNB1 GNB1 chr1 1717365 GNB1 chr1 1717243 Exonic hg19 NA BF974736 Out-of-frame Intra-chr p36.33 p36.33 107047 ChimerSeq ChiTaRs ChiTaRs EZR-INSR EZR chr6 159229021 INSR chr19 7119557 Exonic hg19 NA AW999331 Out-of-frame Inter-chr q25.3 p13.2 TK:InsR 107048 ChimerSeq ChiTaRs ChiTaRs CERCAM-CD3EAP CERCAM chr9 131195928 CD3EAP chr19 45912160 Exonic hg19 NA AW628336 Out-of-frame Inter-chr q34.11 q13.32 107049 ChimerSeq ChiTaRs ChiTaRs ABTB2-CIR1 ABTB2 chr11 34345075 CIR1 chr2 175213481 Exonic hg19 NA CB161195 Out-of-frame Inter-chr p13 q31.1 107050 ChimerSeq ChiTaRs ChiTaRs MPHOSPH10-AES MPHOSPH10 chr2 71362799 AES chr19 3053161 Exonic hg19 NA BE835145 Out-of-frame Inter-chr p13.3 p13.3 107051 ChimerSeq ChiTaRs ChiTaRs MPHOSPH10-AES MPHOSPH10 chr2 71362779 AES chr19 3053161 Exonic hg19 NA BE835090 Out-of-frame Inter-chr p13.3 p13.3 107052 ChimerSeq ChiTaRs ChiTaRs SLC12A7-NUDCD3 SLC12A7 chr5 1051724 NUDCD3 chr7 44507580 Exonic hg19 NA BF762970 Out-of-frame Inter-chr p15.33 p13 107053 ChimerSeq ChiTaRs ChiTaRs SHB-VPS53 SHB chr9 37919601 VPS53 chr17 436123 Exonic hg19 NA AW449261 Out-of-frame Inter-chr p13.1 Tumor suppressor gene 107054 ChimerSeq ChiTaRs ChiTaRs LOC100507463-PYGB LOC100507463 chr6 4244125 PYGB chr20 25277025 Exonic hg19 NA BF088479 Out-of-frame Inter-chr p11.21 107055 ChimerSeq ChiTaRs ChiTaRs COBL-FPGS COBL chr7 51336612 FPGS chr9 130572003 Exonic hg19 NA BE514681 Out-of-frame Inter-chr p12.1 q34.11 107056 ChimerSeq ChiTaRs ChiTaRs FAM120A-EIF4A1 FAM120A chr9 96289505 EIF4A1 chr17 7482162 Exonic hg19 NA CN430498 Out-of-frame Inter-chr q22.31 p13.1 107057 ChimerSeq ChiTaRs ChiTaRs DST-DST DST chr6 56394418 DST chr6 56392294 Exonic hg19 NA AJ707571 Out-of-frame Intra-chr p12.1 Oncogene p12.1 Oncogene 107058 ChimerSeq ChiTaRs ChiTaRs EGR1-EGR1 EGR1 chr5 137803927 EGR1 chr5 137803560 Exonic hg19 NA BF829774 Out-of-frame Intra-chr q31.2 Tumor suppressor gene Transcription factor q31.2 Tumor suppressor gene Transcription factor 107059 ChimerSeq ChiTaRs ChiTaRs TTYH3-TTYH3 TTYH3 chr7 2696117 TTYH3 chr7 2697932 Exonic hg19 NA BF871240 Out-of-frame Intra-chr p22.3 p22.3 107060 ChimerSeq ChiTaRs ChiTaRs SPR-RNASE1 SPR chr2 73119287 RNASE1 chr14 21269566 Exonic hg19 NA AA026314 Out-of-frame Inter-chr p13.2 q11.2 107061 ChimerSeq ChiTaRs ChiTaRs PABPC4-COL6A1 PABPC4 chr1 40041513 COL6A1 chr21 47406443 Exonic hg19 NA BF378691 Out-of-frame Inter-chr p34.3 q22.3 107062 ChimerSeq ChiTaRs ChiTaRs SPTAN1-SPTAN1 SPTAN1 chr9 131369983 SPTAN1 chr9 131379969 Exonic hg19 NA BF954544 Out-of-frame Intra-chr q34.11 q34.11 107063 ChimerSeq ChiTaRs ChiTaRs ADI1-ADI1 ADI1 chr2 3502455 ADI1 chr2 3502303 Exonic hg19 NA BM353985 Out-of-frame Intra-chr 107064 ChimerSeq ChiTaRs ChiTaRs NOLC1-ZDHHC22 NOLC1 chr10 103917020 ZDHHC22 chr14 77605566 Exonic hg19 NA DA794807 Out-of-frame Inter-chr q24.32 q24.3 107065 ChimerSeq ChiTaRs ChiTaRs FAT1-FAT1 FAT1 chr4 187524083 FAT1 chr4 187524109 Exonic hg19 NA BX950906 Out-of-frame Intra-chr q35.2 Tumor suppressor gene q35.2 Tumor suppressor gene 107066 ChimerSeq ChiTaRs ChiTaRs SPTAN1-SPTAN1 SPTAN1 chr9 131375763 SPTAN1 chr9 131377949 Exonic hg19 NA BF081277 Out-of-frame Intra-chr q34.11 q34.11 107067 ChimerSeq ChiTaRs ChiTaRs AMMECR1-ELL3 AMMECR1 chrX 109657806 ELL3 chr15 44085909 Exonic hg19 NA BE171379 Out-of-frame Inter-chr q23 q15.3 107068 ChimerSeq ChiTaRs ChiTaRs HPCAL4-UBC HPCAL4 chr1 40157061 UBC chr12 125398055 Exonic hg19 NA DA136945 Out-of-frame Inter-chr p34.2 q24.31 107069 ChimerSeq ChiTaRs ChiTaRs MYO7B-MYO7B MYO7B chr2 128341781 MYO7B chr2 128384775 Exonic hg19 NA CV395118 Out-of-frame Intra-chr q14.3 q14.3 107070 ChimerSeq ChiTaRs ChiTaRs UGP2-CSE1L UGP2 chr2 64114644 CSE1L chr20 47706108 Exonic hg19 NA BP430745 Out-of-frame Inter-chr p15 q13.13 107071 ChimerSeq ChiTaRs ChiTaRs SOX4-SOX4 SOX4 chr6 21597211 SOX4 chr6 21597073 Exonic hg19 NA BU676818 Out-of-frame Intra-chr p22.3 Transcription factor p22.3 Transcription factor 107072 ChimerSeq ChiTaRs ChiTaRs C1orf192-HBG2 C1orf192 chr1 161337664 HBG2 chr11 5537564 Exonic hg19 NA DB037811 5'UTR-5'UTR Inter-chr p15.4 107073 ChimerSeq ChiTaRs ChiTaRs CYR61-EPAS1 CYR61 chr1 86048608 EPAS1 chr2 46588095 Exonic hg19 NA BQ366671 Out-of-frame Inter-chr p22.3 p21 Tumor suppressor gene Transcription factor 107074 ChimerSeq ChiTaRs ChiTaRs MBD5-GNAI2 MBD5 chr2 149024746 GNAI2 chr3 50268507 Exonic hg19 NA BM931874 Out-of-frame Inter-chr q23.1 p21.31 107075 ChimerSeq ChiTaRs ChiTaRs NOLC1-BIVM-ERCC5 NOLC1 chr10 103919249 BIVM-ERCC5 chr13 103514547 Exonic hg19 NA BF374974 Out-of-frame Inter-chr q24.32 q33.1 107076 ChimerSeq ChiTaRs ChiTaRs SEPT2-SEPT2 2002_ 9_ 1_ chr2 242276888 2002_ 9_ 1_ chr2 242276877 Exonic hg19 NA CN282765 Out-of-frame Intra-chr 107077 ChimerSeq ChiTaRs ChiTaRs DBI-CRTC3 DBI chr2 120128366 CRTC3 chr15 91185609 Exonic hg19 NA DA791146 Out-of-frame Inter-chr q14.2 q26.1 107078 ChimerSeq ChiTaRs ChiTaRs TGFBI-ZYX TGFBI chr5 135383072 ZYX chr7 143085700 Exonic hg19 NA AW239032 Out-of-frame Inter-chr q31.1 Tumor suppressor gene q34 Tumor suppressor gene 107079 ChimerSeq ChiTaRs ChiTaRs KHDRBS3-TRA@ KHDRBS3 chr8 136613691 TRA@ chr14 22981062 Exonic hg19 NA EF392648 Out-of-frame Inter-chr q24.23 q11.2 107080 ChimerSeq ChiTaRs ChiTaRs MOB2-MOB2 MOB2 chr11 1775336 MOB2 chr11 1775339 Exonic hg19 NA BQ354046 Out-of-frame Intra-chr p15.5 p15.5 107081 ChimerSeq ChiTaRs ChiTaRs WDR74-SUGP2 WDR74 chr11 62609281 SUGP2 chr19 19136732 Exonic hg19 NA DA335582 Out-of-frame Inter-chr q12.3 p13.11 107082 ChimerSeq ChiTaRs ChiTaRs GLUL-GLUL GLUL chr1 182357735 GLUL chr1 182353773 Exonic hg19 NA AW352004 Out-of-frame Intra-chr q25.3 q25.3 107083 ChimerSeq ChiTaRs ChiTaRs CD74-ABLIM2 CD74 chr5 149792314 ABLIM2 chr4 8124745 Exonic hg19 NA DA932721 Out-of-frame Inter-chr q33.1 p16.1 107084 ChimerSeq ChiTaRs ChiTaRs CYP27A1-CYP27A1 CYP27A1 chr2 219677081 CYP27A1 chr2 219677103 Exonic hg19 NA BF932362 Out-of-frame Intra-chr q35 q35 107085 ChimerSeq ChiTaRs ChiTaRs NCL-NCL NCL chr2 232323810 NCL chr2 232322354 Exonic hg19 NA H43223 Out-of-frame Intra-chr q37.1 q37.1 107086 ChimerSeq ChiTaRs ChiTaRs SND1-SND1 SND1 chr7 127714725 SND1 chr7 127569240 Exonic hg19 NA BE935241 Out-of-frame Intra-chr q32.1 q32.1 107087 ChimerSeq ChiTaRs ChiTaRs HSD17B10-APEX1 HSD17B10 chrX 53459321 APEX1 chr14 20923449 Exonic hg19 NA BF756615 Out-of-frame Inter-chr p11.22 q11.2 Oncogene 107088 ChimerSeq ChiTaRs ChiTaRs MKX-TGFB3 MKX chr10 27994058 TGFB3 chr14 76424563 Exonic hg19 NA BE835454 Out-of-frame Inter-chr p12.1 Transcription factor q24.3 107089 ChimerSeq ChiTaRs ChiTaRs PSPH-PSPH PSPH chr7 56147710 PSPH chr7 56144549 Exonic hg19 NA BI053242 Out-of-frame Intra-chr p11.2 p11.2 107090 ChimerSeq ChiTaRs ChiTaRs HOGA1-LOC100507412 HOGA1 chr10 99358613 LOC100507412 chr? 109669 Exonic hg19 NA BP275157 Out-of-frame Inter-chr q24.2 107091 ChimerSeq ChiTaRs ChiTaRs GLCCI1-PARP4 GLCCI1 chr7 8019573 PARP4 chr13 25066587 Exonic hg19 NA CN407713 Out-of-frame Inter-chr p21.3 q12.12 107092 ChimerSeq ChiTaRs ChiTaRs YBX1-YBX1 YBX1 chr1 43162615 YBX1 chr1 43161918 Exonic hg19 NA BF331397 Out-of-frame Intra-chr p34.2 Transcription factor p34.2 Transcription factor 107093 ChimerSeq ChiTaRs ChiTaRs SCAMP3-SCAMP3 SCAMP3 chr1 155225908 SCAMP3 chr1 155225883 Exonic hg19 NA AA515099 Out-of-frame Intra-chr 107094 ChimerSeq ChiTaRs ChiTaRs SLCO2A1-DAG1 SLCO2A1 chr3 133654710 DAG1 chr3 49569226 Exonic hg19 NA BE828796 Out-of-frame Intra-chr q22.2 p21.31 107095 ChimerSeq ChiTaRs ChiTaRs ELN-AP2M1 ELN chr7 73446030 AP2M1 chr3 183898960 Exonic hg19 NA BQ365856 Out-of-frame Inter-chr q11.23 q27.1 107096 ChimerSeq ChiTaRs ChiTaRs SHFM1-HSP90AA1 SHFM1 chr7 96339143 HSP90AA1 chr14 102552262 Exonic hg19 NA DW433664 Out-of-frame Inter-chr q32.31 Oncogene 107097 ChimerSeq ChiTaRs ChiTaRs PHGDH-PHGDH PHGDH chr1 120285464 PHGDH chr1 120285552 Exonic hg19 NA BF804555 Out-of-frame Intra-chr p12 p12 107098 ChimerSeq ChiTaRs ChiTaRs ARL6IP6-PKN1 ARL6IP6 chr2 153616599 PKN1 chr19 14552198 Exonic hg19 NA DB012755 Out-of-frame Inter-chr q23.3 p13.12 AGC:PKN 107099 ChimerSeq ChiTaRs ChiTaRs PPP1R3F-PPP1R3F PPP1R3F chrX 49127049 PPP1R3F chrX 49127116 Exonic hg19 NA AI457539 Out-of-frame Intra-chr p11.23 p11.23 107100 ChimerSeq ChiTaRs ChiTaRs CASK-CASK CASK chrX 41530785 CASK chrX 41519692 Exonic hg19 NA BI062469 Out-of-frame Intra-chr p11.4 CAMK:CASK p11.4 CAMK:CASK 107101 ChimerSeq ChiTaRs ChiTaRs NOL9-SUPT5H NOL9 chr1 6592107 SUPT5H chr19 39960799 Exonic hg19 NA BF825716 Out-of-frame Inter-chr p36.31 q13.2 107102 ChimerSeq ChiTaRs ChiTaRs AKAP9-GALNT13 AKAP9 chr7 91726102 GALNT13 chr2 155004397 Exonic hg19 NA BM931973 Out-of-frame Inter-chr q21.2 Oncogene q23.3 107103 ChimerSeq ChiTaRs ChiTaRs PPP3CC-PSD3 PPP3CC chr8 22298971 PSD3 chr8 18658835 Exonic hg19 NA BF512520 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p22 107104 ChimerSeq ChiTaRs ChiTaRs RHBDD2-RHBDD2 RHBDD2 chr7 75511554 RHBDD2 chr7 75517824 Exonic hg19 NA BE936323 CDS-3'UTR Intra-chr q11.23 q11.23 107105 ChimerSeq ChiTaRs ChiTaRs PAG1-PAG1 PAG1 chr8 81884778 PAG1 chr8 81886410 Exonic hg19 NA AW401639 Out-of-frame Intra-chr q21.13 q21.13 107106 ChimerSeq ChiTaRs ChiTaRs HERC3-PSPH HERC3 chr4 89606075 PSPH chr7 56131998 Exonic hg19 NA DC340871 Out-of-frame Inter-chr q22.1 p11.2 107107 ChimerSeq ChiTaRs ChiTaRs CTSK-CTSK CTSK chr1 150771693 CTSK chr1 150771644 Exonic hg19 NA BQ363336 Out-of-frame Intra-chr q21.3 q21.3 107108 ChimerSeq ChiTaRs ChiTaRs CDYL-PSG3 CDYL chr6 4892250 PSG3 chr19 43227797 Exonic hg19 NA BF368907 Out-of-frame Inter-chr p25.1 q13.2 107109 ChimerSeq ChiTaRs ChiTaRs LRPPRC-GPC3 LRPPRC chr2 44223116 GPC3 chrX 132669773 Exonic hg19 NA BI905820 Out-of-frame Inter-chr p21 q26.2 Tumor suppressor gene 107110 ChimerSeq ChiTaRs ChiTaRs PCDHB4-PCDHB4 PCDHB4 chr5 140502858 PCDHB4 chr5 140502612 Exonic hg19 NA BQ319780 Out-of-frame Intra-chr q31.3 q31.3 107111 ChimerSeq ChiTaRs ChiTaRs GNB2-GNB2 GNB2 chr7 100275919 GNB2 chr7 100276623 Exonic hg19 NA BQ326075 Out-of-frame Intra-chr q22.1 q22.1 107112 ChimerSeq ChiTaRs ChiTaRs BIRC6-COLEC12 BIRC6 chr2 32689821 COLEC12 chr18 408338 Exonic hg19 NA BQ366475 Out-of-frame Inter-chr p22.3 p11.32 107113 ChimerSeq ChiTaRs ChiTaRs UNC5A-UNC5A UNC5A chr5 176301488 UNC5A chr5 176305251 Exonic hg19 NA AA985241 Out-of-frame Intra-chr q35.2 Tumor suppressor gene q35.2 Tumor suppressor gene 107114 ChimerSeq ChiTaRs ChiTaRs RPS6-C14orf132 RPS6 chr9 19379618 C14orf132 chr14 96558852 Exonic hg19 NA BE257666 Out-of-frame Inter-chr p22.1 q32.2 107115 ChimerSeq ChiTaRs ChiTaRs CAT-MARK3 CAT chr11 34480259 MARK3 chr14 103958203 Exonic hg19 NA BI024383 Out-of-frame Inter-chr p13 Tumor suppressor gene q32.32 CAMK:CAMKL 107116 ChimerSeq ChiTaRs ChiTaRs PPRC1-PPRC1 PPRC1 chr10 103900494 PPRC1 chr10 103898377 Exonic hg19 NA BF849658 Out-of-frame Intra-chr q24.32 q24.32 107117 ChimerSeq ChiTaRs ChiTaRs HBB-ZMIZ2 HBB chr11 5248301 ZMIZ2 chr7 44804764 Exonic hg19 NA DA941422 5'UTR-CDS Inter-chr p15.4 p13 107118 ChimerSeq ChiTaRs ChiTaRs PSPH-TBC1D1 PSPH chr7 56144560 TBC1D1 chr4 38051491 Exonic hg19 NA BF771965 Out-of-frame Inter-chr p11.2 p14 107119 ChimerSeq ChiTaRs ChiTaRs PSMD13-FAM157B PSMD13 chr11 244761 FAM157B chr9 141131447 Exonic hg19 NA BX103504 CDS-3'UTR Inter-chr p15.5 q34.3 107120 ChimerSeq ChiTaRs ChiTaRs DGKI-RAPGEF4 DGKI chr7 137466835 RAPGEF4 chr2 173901377 Exonic hg19 NA BF962288 Out-of-frame Inter-chr q33 q31.1 107121 ChimerSeq ChiTaRs ChiTaRs UBA1-CERS2 UBA1 chrX 47073985 CERS2 chr1 150939052 Exonic hg19 NA BE075844 Out-of-frame Inter-chr p11.3 q21.3 107122 ChimerSeq ChiTaRs ChiTaRs PRKCZ-VPS28 PRKCZ chr1 2040141 VPS28 chr8 145651547 Exonic hg19 NA BQ370519 Out-of-frame Inter-chr p36.33 q24.3 107123 ChimerSeq ChiTaRs ChiTaRs EIF3M-KRT7 EIF3M chr11 32616323 KRT7 chr12 52636912 Exonic hg19 NA BG002942 Out-of-frame Inter-chr p13 q13.13 107124 ChimerSeq ChiTaRs ChiTaRs MYO10-MYO10 MYO10 chr5 16703201 MYO10 chr5 16701706 Exonic hg19 NA AI049686 Out-of-frame Intra-chr p15.1 p15.1 107125 ChimerSeq ChiTaRs ChiTaRs RAB7A-PKP2 RAB7A chr3 128532328 PKP2 chr12 32945369 Exonic hg19 NA AW361905 Out-of-frame Inter-chr q21.3 Tumor suppressor gene p11.21 107126 ChimerSeq ChiTaRs ChiTaRs SLC9B1-PTPRQ SLC9B1 chr4 103814571 PTPRQ chr12 81067001 Exonic hg19 NA EG327603 Out-of-frame Inter-chr q24 q21.31 107127 ChimerSeq ChiTaRs ChiTaRs PSAP-ACP5 PSAP chr10 73588741 ACP5 chr19 11687572 Exonic hg19 NA AW608479 Out-of-frame Inter-chr q22.1 p13.2 107128 ChimerSeq ChiTaRs ChiTaRs POGZ-POGZ POGZ chr1 151378096 POGZ chr1 151403185 Exonic hg19 NA AW850031 Out-of-frame Intra-chr q21.3 q21.3 107129 ChimerSeq ChiTaRs ChiTaRs SATB2-SATB2 SATB2 chr2 200298239 SATB2 chr2 200233326 Exonic hg19 NA BF756278 Out-of-frame Intra-chr q33.1 Transcription factor q33.1 Transcription factor 107130 ChimerSeq ChiTaRs ChiTaRs KDM4A-AKR1B1 KDM4A chr1 44166263 AKR1B1 chr7 134134330 Exonic hg19 NA AV708454 Out-of-frame Inter-chr p34.2 q33 Tumor suppressor gene 107131 ChimerSeq ChiTaRs ChiTaRs LY6D-LY6D LY6D chr8 143867098 LY6D chr8 143866721 Exonic hg19 NA BE939745 Out-of-frame Intra-chr q24.3 q24.3 107132 ChimerSeq ChiTaRs ChiTaRs TRIM5-MFAP1 TRIM5 chr11 5729468 MFAP1 chr15 44106815 Exonic hg19 NA AW889835 Out-of-frame Inter-chr p15.4 q15.3 107133 ChimerSeq ChiTaRs ChiTaRs SURF2-NUP210 SURF2 chr9 136226901 NUP210 chr3 13390185 Exonic hg19 NA AW800948 Out-of-frame Inter-chr p25.1 107134 ChimerSeq ChiTaRs ChiTaRs MYD88-ARHGEF10L MYD88 chr3 38182993 ARHGEF10L chr1 18014141 Exonic hg19 NA BE161378 Out-of-frame Inter-chr p22.2 Oncogene p36.13 107135 ChimerSeq ChiTaRs ChiTaRs SGCE-SCAPER SGCE chr7 94285435 SCAPER chr15 76866599 Exonic hg19 NA DA151135 Out-of-frame Inter-chr q21.3 q24.3 107136 ChimerSeq ChiTaRs ChiTaRs SDC2-SDC2 SDC2 chr8 97614756 SDC2 chr8 97614682 Exonic hg19 NA BE762893 Out-of-frame Intra-chr q22.1 q22.1 107137 ChimerSeq ChiTaRs ChiTaRs ITPKB-ITPKB ITPKB chr1 226819655 ITPKB chr1 226819391 Exonic hg19 NA BU155062 Out-of-frame Intra-chr q42.12 q42.12 107138 ChimerSeq ChiTaRs ChiTaRs TCEANC-EVPL TCEANC chrX 13687924 EVPL chr17 74004987 Exonic hg19 NA BI045194 Out-of-frame Inter-chr p22.2 q25.1 107139 ChimerSeq ChiTaRs ChiTaRs CLDND1-CLDND1 CLDND1 chr3 98236102 CLDND1 chr3 98235785 Exonic hg19 NA AA665142 Out-of-frame Intra-chr q11.2 q11.2 107140 ChimerSeq ChiTaRs ChiTaRs CIZ1-ARID1A CIZ1 chr9 130932147 ARID1A chr1 27105969 Exonic hg19 NA BF800936 Out-of-frame Inter-chr q34.11 Tumor suppressor gene p36.11 Oncogene Tumor suppressor gene 107141 ChimerSeq ChiTaRs ChiTaRs OGDHL-OGDHL OGDHL chr10 50970356 OGDHL chr10 50964915 Exonic hg19 NA BP348542 Out-of-frame Intra-chr q11.23 q11.23 107142 ChimerSeq ChiTaRs ChiTaRs HSPA9-HSPA9 HSPA9 chr5 137909524 HSPA9 chr5 137906680 Exonic hg19 NA BG876899 Out-of-frame Intra-chr q31.2 q31.2 107143 ChimerSeq ChiTaRs ChiTaRs DDX39B-UBTD1 DDX39B chr6 2828922 UBTD1 chr10 99330101 Exonic hg19 NA AA642571 Out-of-frame Inter-chr q24.1 107144 ChimerSeq ChiTaRs ChiTaRs ARPC4-TTLL3-FEM1A ARPC4-TTLL3 chr3 9882233 FEM1A chr19 4792589 Exonic hg19 NA BI033517 Out-of-frame Inter-chr p25.3 p13.3 107145 ChimerSeq ChiTaRs ChiTaRs SLC4A5-NCOR2 SLC4A5 chr2 74590215 NCOR2 chr12 124824634 Exonic hg19 NA BF528779 Out-of-frame Inter-chr p13.1 q24.31 107146 ChimerSeq ChiTaRs ChiTaRs ARRDC3-ARRDC3 ARRDC3 chr5 90670805 ARRDC3 chr5 90669536 Exonic hg19 NA BF353490 Out-of-frame Intra-chr q14.3 q14.3 107147 ChimerSeq ChiTaRs ChiTaRs GOLGA4-GRHL1 GOLGA4 chr3 37369203 GRHL1 chr2 10136337 Exonic hg19 NA BE693592 Out-of-frame Inter-chr p22.2 p25.1 Transcription factor 107148 ChimerSeq ChiTaRs ChiTaRs FMO5-FMO5 FMO5 chr1 146656867 FMO5 chr1 146656863 Exonic hg19 NA AA491849 Out-of-frame Intra-chr q21.1 q21.1 107149 ChimerSeq ChiTaRs ChiTaRs MXD4-MXD4 MXD4 chr4 2251750 MXD4 chr4 2251796 Exonic hg19 NA CB853830 Out-of-frame Intra-chr p16.3 Transcription factor p16.3 Transcription factor 107150 ChimerSeq ChiTaRs ChiTaRs MIA3-PABPC1L MIA3 chr1 222802651 PABPC1L chr20 43561742 Exonic hg19 NA BF906047 Out-of-frame Inter-chr q41 q13.12 107151 ChimerSeq ChiTaRs ChiTaRs PRRC2B-GRK5 PRRC2B chr9 134343430 GRK5 chr10 121184799 Exonic hg19 NA BF822493 Out-of-frame Inter-chr q34.13 q26.11 107152 ChimerSeq ChiTaRs ChiTaRs GUK1-ARF1 GUK1 chr1 228328067 ARF1 chr1 228284778 Exonic hg19 NA DA131615 5'UTR-5'UTR Intra-chr q42.13 q42.13 Tumor suppressor gene Seq+ 107153 ChimerSeq ChiTaRs ChiTaRs MRPL33-ZNF649 MRPL33 chr2 27995560 ZNF649 chr19 52394855 Exonic hg19 NA DA302116 Out-of-frame Inter-chr p23.2 q13.41 Transcription factor 107154 ChimerSeq ChiTaRs ChiTaRs NCAPH-NCAPH NCAPH chr2 97025906 NCAPH chr2 97025963 Exonic hg19 NA AA961770 Out-of-frame Intra-chr q11.2 q11.2 107155 ChimerSeq ChiTaRs ChiTaRs TTC1-ZCCHC17 TTC1 chr5 159450834 ZCCHC17 chr1 31821769 Exonic hg19 NA CB852453 Out-of-frame Inter-chr q33.3 p35.2 107156 ChimerSeq ChiTaRs ChiTaRs HLA-F-COL1A1 HLA-F chr6 1358798 COL1A1 chr17 48266544 Exonic hg19 NA BQ328407 Out-of-frame Inter-chr q21.33 107157 ChimerSeq ChiTaRs ChiTaRs SRSF3-SRSF3 SRSF3 chr6 36567802 SRSF3 chr6 36567819 Exonic hg19 NA BF336418 Out-of-frame Intra-chr p21.31 p21.31 107158 ChimerSeq ChiTaRs ChiTaRs MPP6-MPP6 MPP6 chr7 24708279 MPP6 chr7 24663282 Exonic hg19 NA DW419199 Out-of-frame Intra-chr p15.3 p15.3 107159 ChimerSeq ChiTaRs ChiTaRs BRD9-LOC100507412 BRD9 chr5 892783 LOC100507412 chr? 115782 Exonic hg19 NA AA877893 Out-of-frame Inter-chr p15.33 107160 ChimerSeq ChiTaRs ChiTaRs IDH1-NCL IDH1 chr2 209103915 NCL chr2 232326411 Exonic hg19 NA CN423757 Out-of-frame Intra-chr q34 Oncogene Tumor suppressor gene q37.1 107161 ChimerSeq ChiTaRs ChiTaRs E2F8-ZNF638 E2F8 chr11 19259511 ZNF638 chr2 71623271 Exonic hg19 NA DA892965 Out-of-frame Inter-chr p15.1 Transcription factor p13.3 107162 ChimerSeq ChiTaRs ChiTaRs RASSF4-RFC3 RASSF4 chr10 45474255 RFC3 chr13 34392289 Exonic hg19 NA DB171776 Out-of-frame Inter-chr q11.21 Tumor suppressor gene q13.2 107163 ChimerSeq ChiTaRs ChiTaRs ANKRD1-CAV1 ANKRD1 chr10 92680843 CAV1 chr7 116165090 Exonic hg19 NA BP260187 Out-of-frame Inter-chr q23.31 q31.2 Tumor suppressor gene 107164 ChimerSeq ChiTaRs ChiTaRs DNAH14-HDLBP DNAH14 chr1 225581776 HDLBP chr2 242194464 Exonic hg19 NA BG984033 Out-of-frame Inter-chr q42.12 q37.3 107165 ChimerSeq ChiTaRs ChiTaRs MPHOSPH10-GABRA2 MPHOSPH10 chr2 71362779 GABRA2 chr4 46311407 Exonic hg19 NA BE835106 Out-of-frame Inter-chr p13.3 p12 107166 ChimerSeq ChiTaRs ChiTaRs CPLX2-CPLX2 CPLX2 chr5 175311023 CPLX2 chr5 175310818 Exonic hg19 NA AA015617 3'UTR-3'UTR Intra-chr q35.2 q35.2 107167 ChimerSeq ChiTaRs ChiTaRs ANXA1-ARPC3 ANXA1 chr9 75775232 ARPC3 chr12 110873951 Exonic hg19 NA CF126160 Out-of-frame Inter-chr q21.13 Tumor suppressor gene q24.11 107168 ChimerSeq ChiTaRs ChiTaRs TAGLN2-PPP1R15A TAGLN2 chr1 159887952 PPP1R15A chr19 49377180 Exonic hg19 NA CA442157 Out-of-frame Inter-chr q23.2 q13.33 107169 ChimerSeq ChiTaRs ChiTaRs TPM2-MYH9 TPM2 chr9 35689823 MYH9 chr22 36692983 Exonic hg19 NA BF840453 Out-of-frame Inter-chr p13.3 q12.3 Oncogene Tumor suppressor gene 107170 ChimerSeq ChiTaRs ChiTaRs IFITM2-IFITM2 IFITM2 chr11 309354 IFITM2 chr11 308204 Exonic hg19 NA BG938478 Out-of-frame Intra-chr p15.5 p15.5 107171 ChimerSeq ChiTaRs ChiTaRs PCYOX1-UBAP2 PCYOX1 chr2 70488518 UBAP2 chr9 33941813 Exonic hg19 NA DA791004 In-Frame Inter-chr p13.3 p13.3 107172 ChimerSeq ChiTaRs ChiTaRs HLA-DRB5-FGR HLA-DRB5 chr6 32552269 FGR chr1 27942120 Exonic hg19 NA BF849961 Out-of-frame Inter-chr p21.32 p35.3 107173 ChimerSeq ChiTaRs ChiTaRs COL1A2-COL1A2 COL1A2 chr7 94049938 COL1A2 chr7 94045776 Exonic hg19 NA CN390293 Out-of-frame Intra-chr q21.3 q21.3 107174 ChimerSeq ChiTaRs ChiTaRs EFHC1-TCEAL4 EFHC1 chr6 52367892 TCEAL4 chrX 102840515 Exonic hg19 NA BE700058 Out-of-frame Inter-chr p12.2 q22.2 107175 ChimerSeq ChiTaRs ChiTaRs ARPC1B-ARPC1B ARPC1B chr7 98992335 ARPC1B chr7 98992340 Exonic hg19 NA CB243728 Out-of-frame Intra-chr q22.1 q22.1 107176 ChimerSeq ChiTaRs ChiTaRs C6orf120-FGD1 C6orf120 chr6 170110471 FGD1 chrX 54493523 Exonic hg19 NA BF757898 Out-of-frame Inter-chr q27 p11.22 107177 ChimerSeq ChiTaRs ChiTaRs SKI-SKI SKI chr1 2238896 SKI chr1 2238156 Exonic hg19 NA AI949581 Out-of-frame Intra-chr p36.33 Transcription factor p36.33 Transcription factor 107178 ChimerSeq ChiTaRs ChiTaRs COL5A1-COL5A1 COL5A1 chr9 137677779 COL5A1 chr9 137677504 Exonic hg19 NA CV357879 Out-of-frame Intra-chr q34.3 q34.3 107179 ChimerSeq ChiTaRs ChiTaRs MAP1B-MAP1B MAP1B chr5 71493087 MAP1B chr5 71492960 Exonic hg19 NA BF953347 Out-of-frame Intra-chr q13.2 q13.2 107180 ChimerSeq ChiTaRs ChiTaRs NCAPH-NCAPH NCAPH chr2 97025906 NCAPH chr2 97025927 Exonic hg19 NA AI962489 Out-of-frame Intra-chr q11.2 q11.2 107181 ChimerSeq ChiTaRs ChiTaRs AGAP1-MYH9 AGAP1 chr2 236749754 MYH9 chr22 36684355 Exonic hg19 NA BE693446 Out-of-frame Inter-chr q37.2 q12.3 Oncogene Tumor suppressor gene 107182 ChimerSeq ChiTaRs ChiTaRs PRRC2B-PRRC2B PRRC2B chr9 134363265 PRRC2B chr9 134361506 Exonic hg19 NA BI045433 Out-of-frame Intra-chr q34.13 q34.13 107183 ChimerSeq ChiTaRs ChiTaRs MLL5-NFKBID MLL5 chr7 104730593 NFKBID chr19 36388634 Exonic hg19 NA AW027485 Out-of-frame Inter-chr q13.12 107184 ChimerSeq ChiTaRs ChiTaRs QDPR-DHX34 QDPR chr4 17503433 DHX34 chr19 47865829 Exonic hg19 NA BF375181 Out-of-frame Inter-chr p15.32 q13.32 107185 ChimerSeq ChiTaRs ChiTaRs FRAS1-ARMCX3 FRAS1 chr4 79102669 ARMCX3 chrX 100878152 Exonic hg19 NA BM825822 Out-of-frame Inter-chr q21.21 q22.1 107186 ChimerSeq ChiTaRs ChiTaRs PRKG1-VDAC3 PRKG1 chr10 53457852 VDAC3 chr8 42259305 Exonic hg19 NA BF873327 Out-of-frame Inter-chr q11.23 p11.21 107187 ChimerSeq ChiTaRs ChiTaRs TMCC2-TMCC2 TMCC2 chr1 205238743 TMCC2 chr1 205197849 Exonic hg19 NA DA808828 Out-of-frame Intra-chr q32.1 q32.1 107188 ChimerSeq ChiTaRs ChiTaRs SMARCC1-SMARCC1 SMARCC1 chr3 47676793 SMARCC1 chr3 47823093 Exonic hg19 NA BP371110 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene 107189 ChimerSeq ChiTaRs ChiTaRs CHST15-ISLR CHST15 chr10 125804472 ISLR chr15 74468270 Exonic hg19 NA BE707961 Out-of-frame Inter-chr q26.13 q24.1 107190 ChimerSeq ChiTaRs ChiTaRs SNHG3-DROSHA SNHG3 chr1 28834672 DROSHA chr5 31468136 Exonic hg19 NA DA644608 5'UTR-CDS Inter-chr p35.3 p13.3 107191 ChimerSeq ChiTaRs ChiTaRs MFHAS1-FRMD4B MFHAS1 chr8 8643565 FRMD4B chr3 69318014 Exonic hg19 NA AI765155 Out-of-frame Inter-chr p23.1 p14.1 107192 ChimerSeq ChiTaRs ChiTaRs MEA1-MEA1 MEA1 chr6 42980909 MEA1 chr6 42979827 Exonic hg19 NA BM550317 Out-of-frame Intra-chr p21.1 p21.1 107193 ChimerSeq ChiTaRs ChiTaRs ZSCAN23-SV2B ZSCAN23 chr6 28411262 SV2B chr15 91824957 Exonic hg19 NA DA248680 5'UTR-CDS Inter-chr p22.1 Transcription factor q26.1 107194 ChimerSeq ChiTaRs ChiTaRs MAP7D1-RINL MAP7D1 chr1 36644420 RINL chr19 39359429 Exonic hg19 NA BI025071 Out-of-frame Inter-chr p34.3 107195 ChimerSeq ChiTaRs ChiTaRs TNKS1BP1-MACF1 TNKS1BP1 chr11 57077371 MACF1 chr1 39802872 Exonic hg19 NA BF810602 Out-of-frame Inter-chr q12.1 p34.3 107196 ChimerSeq ChiTaRs ChiTaRs SH2D3C-SH2D3C SH2D3C chr9 130505244 SH2D3C chr9 130506842 Exonic hg19 NA BF988265 Out-of-frame Intra-chr q34.11 q34.11 107197 ChimerSeq ChiTaRs ChiTaRs CA13-CA13 CA13 chr8 86272421 CA13 chr8 86272269 Exonic hg19 NA BF334232 Out-of-frame Intra-chr q21.2 q21.2 107198 ChimerSeq ChiTaRs ChiTaRs ABCC10-CUL9 ABCC10 chr6 43395708 CUL9 chr6 43182814 Exonic hg19 NA DA875626 Out-of-frame Intra-chr p21.1 p21.1 107199 ChimerSeq ChiTaRs ChiTaRs ABCF1-ABCF1 ABCF1 chr6 1882536 ABCF1 chr6 1891505 Exonic hg19 NA BE673306 Out-of-frame Intra-chr 107200 ChimerSeq ChiTaRs ChiTaRs ORM1-ORM1 ORM1 chr9 117087389 ORM1 chr9 117087379 Exonic hg19 NA AA659179 Out-of-frame Intra-chr q32 q32 107201 ChimerSeq ChiTaRs ChiTaRs TMEM30A-INS-IGF2 TMEM30A chr6 75969165 INS-IGF2 chr11 2152916 Exonic hg19 NA CN334376 Out-of-frame Inter-chr q14.1 p15.5 107202 ChimerSeq ChiTaRs ChiTaRs POLN-C1orf159 POLN chr4 2243848 C1orf159 chr1 1022914 Exonic hg19 NA DA066689 Out-of-frame Inter-chr p16.3 p36.33 107203 ChimerSeq ChiTaRs ChiTaRs GNG4-SORBS1 GNG4 chr1 235714990 SORBS1 chr10 97072737 Exonic hg19 NA AW888605 Out-of-frame Inter-chr q24.1 107204 ChimerSeq ChiTaRs ChiTaRs GADD45G-WARS GADD45G chr9 92220011 WARS chr14 100803470 Exonic hg19 NA BF988254 Out-of-frame Inter-chr q22.2 Tumor suppressor gene q32.2 107205 ChimerSeq ChiTaRs ChiTaRs SPARC-BOLA2 SPARC chr5 151046031 BOLA2 chr16 30078618 Exonic hg19 NA BE928982 Out-of-frame Inter-chr q33.1 Tumor suppressor gene p11.2 107206 ChimerSeq ChiTaRs ChiTaRs LINC00290-LRRC61 LINC00290 chr4 181994191 LRRC61 chr7 150034483 Exonic hg19 NA AI732193 Out-of-frame Inter-chr q34.3 q36.1 107207 ChimerSeq ChiTaRs ChiTaRs TCF7-S100A14 TCF7 chr5 133451685 S100A14 chr1 153587333 Exonic hg19 NA BF799331 Out-of-frame Inter-chr q31.1 Transcription factor q21.3 107208 ChimerSeq ChiTaRs ChiTaRs HLA-DRB5-FGR HLA-DRB5 chr6 32552278 FGR chr1 27942120 Exonic hg19 NA BF849952 Out-of-frame Inter-chr p21.32 p35.3 107209 ChimerSeq ChiTaRs ChiTaRs SETD2-NASP SETD2 chr3 47103777 NASP chr1 46056907 Exonic hg19 NA DA232535 Out-of-frame Inter-chr p21.31 Oncogene Tumor suppressor gene p34.1 107210 ChimerSeq ChiTaRs ChiTaRs FTH1-CAPNS1 FTH1 chr11 61735085 CAPNS1 chr19 36632030 Exonic hg19 NA CF128359 Out-of-frame Inter-chr q12.3 q13.12 107211 ChimerSeq ChiTaRs ChiTaRs MGAT1-MGAT1 MGAT1 chr5 180217802 MGAT1 chr5 180217811 Exonic hg19 NA AA730426 Out-of-frame Intra-chr q35.3 q35.3 107212 ChimerSeq ChiTaRs ChiTaRs FAM134A-FAM46A FAM134A chr2 220048201 FAM46A chr6 82459009 Exonic hg19 NA BF848412 Out-of-frame Inter-chr q14.1 107213 ChimerSeq ChiTaRs ChiTaRs INTS1-TMC4 INTS1 chr7 1510594 TMC4 chr19 54666428 Exonic hg19 NA BF765954 Out-of-frame Inter-chr p22.3 107214 ChimerSeq ChiTaRs ChiTaRs KIAA0020-INS-IGF2 KIAA0020 chr9 2811390 INS-IGF2 chr11 2152956 Exonic hg19 NA AW878564 Out-of-frame Inter-chr p15.5 107215 ChimerSeq ChiTaRs ChiTaRs GABRE-SYNPO2 GABRE chrX 151123554 SYNPO2 chr4 119951199 Exonic hg19 NA BF827216 Out-of-frame Inter-chr q28 q26 Tumor suppressor gene 107216 ChimerSeq ChiTaRs ChiTaRs TMCO6-COL6A2 TMCO6 chr5 140021365 COL6A2 chr21 47549109 Exonic hg19 NA DB094583 Out-of-frame Inter-chr q31.3 q22.3 107217 ChimerSeq ChiTaRs ChiTaRs MAEA-MAEA MAEA chr4 1333791 MAEA chr4 1333796 Exonic hg19 NA CN428118 Out-of-frame Intra-chr p16.3 p16.3 107218 ChimerSeq ChiTaRs ChiTaRs HUWE1-PLXNA2 HUWE1 chrX 53592132 PLXNA2 chr1 208202391 Exonic hg19 NA BI050349 Out-of-frame Inter-chr p11.22 q32.2 107219 ChimerSeq ChiTaRs ChiTaRs HCFC1-ARHGAP35 HCFC1 chrX 153225326 ARHGAP35 chr19 47503784 Exonic hg19 NA BF814972 Out-of-frame Inter-chr q28 q13.32 Transcription factor 107220 ChimerSeq ChiTaRs ChiTaRs SQSTM1-PLIN2 SQSTM1 chr5 179260220 PLIN2 chr9 19121071 Exonic hg19 NA BG314910 Out-of-frame Inter-chr q35.3 p22.1 107221 ChimerSeq ChiTaRs ChiTaRs FLNA-FLNA FLNA chrX 153592677 FLNA chrX 153593261 Exonic hg19 NA BQ327077 Out-of-frame Intra-chr q28 Tumor suppressor gene q28 Tumor suppressor gene 107222 ChimerSeq ChiTaRs ChiTaRs TSPYL2-USP20 TSPYL2 chrX 53117721 USP20 chr9 132625542 Exonic hg19 NA N91854 Out-of-frame Inter-chr p11.22 q34.11 107223 ChimerSeq ChiTaRs ChiTaRs MPHOSPH10-AES MPHOSPH10 chr2 71362784 AES chr19 3053161 Exonic hg19 NA BE835107 Out-of-frame Inter-chr p13.3 p13.3 107224 ChimerSeq ChiTaRs ChiTaRs OSBPL5-OSBPL5 OSBPL5 chr11 3114279 OSBPL5 chr11 3114868 Exonic hg19 NA CB049070 Out-of-frame Intra-chr p15.4 p15.4 107225 ChimerSeq ChiTaRs ChiTaRs ST5-GPT2 ST5 chr11 8737355 GPT2 chr16 46956202 Exonic hg19 NA BF772696 Out-of-frame Inter-chr p15.4 Tumor suppressor gene q11.2 107226 ChimerSeq ChiTaRs ChiTaRs PQBP1-PQBP1 PQBP1 chrX 48760322 PQBP1 chrX 48760014 Exonic hg19 NA BE159568 Out-of-frame Intra-chr p11.23 p11.23 107227 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-INS-IGF2 INS-IGF2 chr11 2150702 INS-IGF2 chr11 2150805 Exonic hg19 NA BQ338442 Out-of-frame Intra-chr p15.5 p15.5 Oncogene 107228 ChimerSeq ChiTaRs ChiTaRs GOLGA2-FN3KRP GOLGA2 chr9 131022439 FN3KRP chr17 80684703 Exonic hg19 NA BI028997 Out-of-frame Inter-chr q34.11 q25.3 107229 ChimerSeq ChiTaRs ChiTaRs CLTB-MCMBP CLTB chr5 175819547 MCMBP chr10 121591003 Exonic hg19 NA AA724174 Out-of-frame Inter-chr q35.2 q26.11 107230 ChimerSeq ChiTaRs ChiTaRs SEMA6A-DLG5 SEMA6A chr5 115782187 DLG5 chr10 79572329 Exonic hg19 NA BF990530 Out-of-frame Inter-chr q23.1 q22.3 107231 ChimerSeq ChiTaRs ChiTaRs ARHGAP4-ARHGAP4 ARHGAP4 chrX 153191338 ARHGAP4 chrX 153191165 Exonic hg19 NA EL583796 Out-of-frame Intra-chr q28 q28 107232 ChimerSeq ChiTaRs ChiTaRs REPS1-GTPBP1 REPS1 chr6 139233996 GTPBP1 chr22 39127493 Exonic hg19 NA BQ324283 Out-of-frame Inter-chr q24.1 q13.1 107233 ChimerSeq ChiTaRs ChiTaRs AHNAK-AHNAK AHNAK chr11 62214299 AHNAK chr11 62214068 Exonic hg19 NA BF925652 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q12.3 Tumor suppressor gene 107234 ChimerSeq ChiTaRs ChiTaRs CDHR5-HGS CDHR5 chr11 618965 HGS chr17 79658579 Exonic hg19 NA BE825240 Out-of-frame Inter-chr q25.3 107235 ChimerSeq ChiTaRs ChiTaRs CSGALNACT2-ACKR3 CSGALNACT2 chr10 43654362 ACKR3 chr2 237478468 Exonic hg19 NA DA381927 Out-of-frame Inter-chr q11.21 q37.3 107236 ChimerSeq ChiTaRs ChiTaRs HLA-DPA1-SOX12 HLA-DPA1 chr6 4513346 SOX12 chr20 308768 Exonic hg19 NA BP394074 Out-of-frame Inter-chr p13 107237 ChimerSeq ChiTaRs ChiTaRs PSMC2-PSMC2 PSMC2 chr7 103008602 PSMC2 chr7 103008158 Exonic hg19 NA BM983260 Out-of-frame Intra-chr q22.1 q22.1 107238 ChimerSeq ChiTaRs ChiTaRs SGIP1-SEC31B SGIP1 chr1 67120431 SEC31B chr10 102246403 Exonic hg19 NA BP420715 Out-of-frame Inter-chr p31.3 q24.31 107239 ChimerSeq ChiTaRs ChiTaRs NAV1-NAV1 NAV1 chr1 201687883 NAV1 chr1 201681938 Exonic hg19 NA BF842513 CDS-5'UTR Intra-chr q32.1 q32.1 107240 ChimerSeq ChiTaRs ChiTaRs IFT122-IFT122 IFT122 chr3 129183496 IFT122 chr3 129183576 Exonic hg19 NA AW083781 Out-of-frame Intra-chr q21.3 q21.3 107241 ChimerSeq ChiTaRs ChiTaRs NFE2L2-NFE2L2 NFE2L2 chr2 178095905 NFE2L2 chr2 178097154 Exonic hg19 NA BE005425 Out-of-frame Intra-chr q31.2 Oncogene Transcription factor q31.2 Oncogene Transcription factor 107242 ChimerSeq ChiTaRs ChiTaRs ZNF703-DMKN ZNF703 chr8 37554897 DMKN chr19 36003644 Exonic hg19 NA BG993061 Out-of-frame Inter-chr p11.23 Transcription factor q13.12 107243 ChimerSeq ChiTaRs ChiTaRs ARID5B-NOTCH2 ARID5B chr10 63845600 NOTCH2 chr1 120470149 Exonic hg19 NA DR979590 Out-of-frame Inter-chr q21.2 Transcription factor p12 Oncogene Tumor suppressor gene 107244 ChimerSeq ChiTaRs ChiTaRs ANKHD1-ANKHD1 ANKHD1 chr5 139903710 ANKHD1 chr5 139903718 Exonic hg19 NA CA312335 Out-of-frame Intra-chr q31.3 q31.3 107245 ChimerSeq ChiTaRs ChiTaRs REG1A-GNA11 REG1A chr2 79350531 GNA11 chr19 3115035 Exonic hg19 NA CK818890 Out-of-frame Inter-chr p12 p13.3 Oncogene 107246 ChimerSeq ChiTaRs ChiTaRs SATB2-SATB2 SATB2 chr2 200173664 SATB2 chr2 200213550 Exonic hg19 NA BE700169 Out-of-frame Intra-chr q33.1 Transcription factor q33.1 Transcription factor 107247 ChimerSeq ChiTaRs ChiTaRs EFR3B-EFR3B EFR3B chr2 25367878 EFR3B chr2 25314247 Exonic hg19 NA M78902 Out-of-frame Intra-chr p23.3 p23.3 107248 ChimerSeq ChiTaRs ChiTaRs NOLC1-SHROOM3 NOLC1 chr10 103920810 SHROOM3 chr4 77676016 Exonic hg19 NA AW206361 Out-of-frame Inter-chr q24.32 q21.1 107249 ChimerSeq ChiTaRs ChiTaRs DLG5-EIF4A2 DLG5 chr10 79584177 EIF4A2 chr3 186502123 Exonic hg19 NA BF990739 Out-of-frame Inter-chr q22.3 q27.3 107250 ChimerSeq ChiTaRs ChiTaRs FTH1-BCYRN1 FTH1 chr11 61735103 BCYRN1 chrX 70514287 Exonic hg19 NA DA783643 Out-of-frame Inter-chr q12.3 p21 107251 ChimerSeq ChiTaRs ChiTaRs TNPO1-ZFP106 TNPO1 chr5 72185276 ZFP106 chr15 42707674 Exonic hg19 NA BQ338374 Out-of-frame Inter-chr q13.2 107252 ChimerSeq ChiTaRs ChiTaRs MCM7-FCF1 MCM7 chr7 99690459 FCF1 chr14 75179909 Exonic hg19 NA EC558070 Out-of-frame Inter-chr q22.1 q24.3 107253 ChimerSeq ChiTaRs ChiTaRs ARHGAP4-ARHGAP4 ARHGAP4 chrX 153191341 ARHGAP4 chrX 153191157 Exonic hg19 NA EL583776 Out-of-frame Intra-chr q28 q28 107254 ChimerSeq ChiTaRs ChiTaRs TINAGL1-TINAGL1 TINAGL1 chr1 32049159 TINAGL1 chr1 32049161 Exonic hg19 NA BF368733 Out-of-frame Intra-chr p35.2 p35.2 107255 ChimerSeq ChiTaRs ChiTaRs SHFM1-HSP90AA1 SHFM1 chr7 96339143 HSP90AA1 chr14 102552256 Exonic hg19 NA DW431867 Out-of-frame Inter-chr q32.31 Oncogene 107256 ChimerSeq ChiTaRs ChiTaRs BRD2-BRD2 BRD2 chr6 4426864 BRD2 chr6 4425365 Exonic hg19 NA BF815013 Out-of-frame Intra-chr Atypical:BRD Atypical:BRD 107257 ChimerSeq ChiTaRs ChiTaRs NUP214-INS-IGF2 NUP214 chr9 134070382 INS-IGF2 chr11 2154279 Exonic hg19 NA BG003896 Out-of-frame Inter-chr q34.13 Oncogene p15.5 107258 ChimerSeq ChiTaRs ChiTaRs MERTK-SHISA5 MERTK chr2 112704994 SHISA5 chr3 48510868 Exonic hg19 NA BE772596 Out-of-frame Inter-chr q13 p21.31 107259 ChimerSeq ChiTaRs ChiTaRs CGN-CGN CGN chr1 151492972 CGN chr1 151492666 Exonic hg19 NA BF880274 Out-of-frame Intra-chr q21.3 q21.3 107260 ChimerSeq ChiTaRs ChiTaRs GABBR1-UCP2 GABBR1 chr6 874150 UCP2 chr11 73686648 Exonic hg19 NA BF841681 Out-of-frame Inter-chr q13.4 107261 ChimerSeq ChiTaRs ChiTaRs CAPZB-CAPZB CAPZB chr1 19811979 CAPZB chr1 19705110 Exonic hg19 NA BQ370695 Out-of-frame Intra-chr p36.13 p36.13 107262 ChimerSeq ChiTaRs ChiTaRs CLIP2-PYGB CLIP2 chr7 73790631 PYGB chr20 25266898 Exonic hg19 NA BF764783 Out-of-frame Inter-chr q11.23 p11.21 107263 ChimerSeq ChiTaRs ChiTaRs PBXIP1-MAN2B2 PBXIP1 chr1 154918881 MAN2B2 chr4 6610905 Exonic hg19 NA BF922845 Out-of-frame Inter-chr q21.3 p16.1 107264 ChimerSeq ChiTaRs ChiTaRs HLA-DPA1-HLA-DPB1 HLA-DPA1 chr6 4389591 HLA-DPB1 chr6 4534060 Exonic hg19 NA AW366700 Out-of-frame Intra-chr 107265 ChimerSeq ChiTaRs ChiTaRs RALGDS-MAMLD1 RALGDS chr9 135976606 MAMLD1 chrX 149638806 Exonic hg19 NA DA107579 Out-of-frame Inter-chr q34.2 Oncogene q28 107266 ChimerSeq ChiTaRs ChiTaRs TPM2-MUC2 TPM2 chr9 35689893 MUC2 chr11 1092956 Exonic hg19 NA AW842723 Out-of-frame Inter-chr p13.3 107267 ChimerSeq ChiTaRs ChiTaRs SLC2A12-ZNF236 SLC2A12 chr6 134311343 ZNF236 chr18 74624220 Exonic hg19 NA AA665574 Out-of-frame Inter-chr q23.2 q23 Transcription factor 107268 ChimerSeq ChiTaRs ChiTaRs TPM2-CIT TPM2 chr9 35689922 CIT chr12 120231461 Exonic hg19 NA DA577148 Out-of-frame Inter-chr p13.3 q24.23 107269 ChimerSeq ChiTaRs ChiTaRs DOCK10-RNU5F-1 DOCK10 chr2 225758446 RNU5F-1 chr1 220284167 Exonic hg19 NA BF326144 Out-of-frame Inter-chr q36.2 p34.1 107270 ChimerSeq ChiTaRs ChiTaRs CLSTN1-CLSTN1 CLSTN1 chr1 9804680 CLSTN1 chr1 9811613 Exonic hg19 NA DA224602 Out-of-frame Intra-chr p36.22 p36.22 107271 ChimerSeq ChiTaRs ChiTaRs PRDX6-PRDX6 PRDX6 chr1 173457430 PRDX6 chr1 173457113 Exonic hg19 NA CA439640 Out-of-frame Intra-chr q25.1 q25.1 107272 ChimerSeq ChiTaRs ChiTaRs H19-LAMA5 H19 chr11 2019008 LAMA5 chr20 60884519 Exonic hg19 NA CN391244 Out-of-frame Inter-chr p15.5 Tumor suppressor gene q13.33 107273 ChimerSeq ChiTaRs ChiTaRs ZDHHC4-ZDHHC4 ZDHHC4 chr7 6628607 ZDHHC4 chr7 6624763 Exonic hg19 NA AI740665 Out-of-frame Intra-chr p22.1 p22.1 107274 ChimerSeq ChiTaRs ChiTaRs NAPRT1-NAPRT1 NAPRT1 chr8 144659046 NAPRT1 chr8 144659987 Exonic hg19 NA AW842738 Out-of-frame Intra-chr 107275 ChimerSeq ChiTaRs ChiTaRs NT5DC2-STAB1 NT5DC2 chr3 52558871 STAB1 chr3 52558403 Exonic hg19 NA AA285062 Out-of-frame Intra-chr p21.1 p21.1 107276 ChimerSeq ChiTaRs ChiTaRs SLC29A4-CFL1 SLC29A4 chr7 5327504 CFL1 chr11 65622727 Exonic hg19 NA BQ876729 Out-of-frame Inter-chr p22.1 q13.1 107277 ChimerSeq ChiTaRs ChiTaRs ADAMTS4-ADAMTS4 ADAMTS4 chr1 161161084 ADAMTS4 chr1 161160662 Exonic hg19 NA AW793935 Out-of-frame Intra-chr q23.3 q23.3 107278 ChimerSeq ChiTaRs ChiTaRs D2HGDH-HDGFRP2 D2HGDH chr2 242695430 HDGFRP2 chr19 4500224 Exonic hg19 NA BF920776 Out-of-frame Inter-chr q37.3 107279 ChimerSeq ChiTaRs ChiTaRs WDR74-DOT1L WDR74 chr11 62600524 DOT1L chr19 2230330 Exonic hg19 NA AA554469 Out-of-frame Inter-chr q12.3 p13.3 Oncogene Transcription factor 107280 ChimerSeq ChiTaRs ChiTaRs TRIM26-TRIM26 TRIM26 chr6 1502080 TRIM26 chr6 1484225 Exonic hg19 NA BF914446 Out-of-frame Intra-chr 107281 ChimerSeq ChiTaRs ChiTaRs BMP1-MALL BMP1 chr8 22052046 MALL chr2 110841958 Exonic hg19 NA BF737796 Out-of-frame Inter-chr p21.3 q13 107282 ChimerSeq ChiTaRs ChiTaRs USP20-USP20 USP20 chr9 132643590 USP20 chr9 132643579 Exonic hg19 NA AA393366 Out-of-frame Intra-chr q34.11 q34.11 107283 ChimerSeq ChiTaRs ChiTaRs HTT-TMED4 HTT chr4 3231538 TMED4 chr7 44620802 Exonic hg19 NA BE766597 Out-of-frame Inter-chr p16.3 p13 107284 ChimerSeq ChiTaRs ChiTaRs NASP-LUC7L3 NASP chr1 46072218 LUC7L3 chr17 48823182 Exonic hg19 NA CN266771 Out-of-frame Inter-chr p34.1 q21.33 107285 ChimerSeq ChiTaRs ChiTaRs NPNT-ST3GAL1 NPNT chr4 106888601 ST3GAL1 chr8 134502882 Exonic hg19 NA BF329641 CDS-5'UTR Inter-chr q24 q24.22 107286 ChimerSeq ChiTaRs ChiTaRs ABTB2-QRICH1 ABTB2 chr11 34177056 QRICH1 chr3 49094655 Exonic hg19 NA AA875968 Out-of-frame Inter-chr p13 p21.31 107287 ChimerSeq ChiTaRs ChiTaRs FLJ23867-FLJ23867 FLJ23867 chr1 180168634 FLJ23867 chr1 180168880 Exonic hg19 NA AW861635 Out-of-frame Intra-chr 107288 ChimerSeq ChiTaRs ChiTaRs EML3-HNRNPH3 EML3 chr11 62376523 HNRNPH3 chr10 70101000 Exonic hg19 NA BF902815 Out-of-frame Inter-chr q12.3 q21.3 107289 ChimerSeq ChiTaRs ChiTaRs PARP12-PARP12 PARP12 chr7 139754511 PARP12 chr7 139757560 Exonic hg19 NA BF959878 Out-of-frame Intra-chr q34 q34 107290 ChimerSeq ChiTaRs ChiTaRs VPS72-MUC4 VPS72 chr1 151149497 MUC4 chr3 195515498 Exonic hg19 NA BG015132 Out-of-frame Inter-chr q21.3 107291 ChimerSeq ChiTaRs ChiTaRs G6PD-G6PD G6PD chrX 153761445 G6PD chrX 153761161 Exonic hg19 NA BQ352059 Out-of-frame Intra-chr q28 Oncogene q28 Oncogene 107292 ChimerSeq ChiTaRs ChiTaRs NPRL2-NPRL2 NPRL2 chr3 50387556 NPRL2 chr3 50387015 Exonic hg19 NA DN989560 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene 107293 ChimerSeq ChiTaRs ChiTaRs ARF5-ARF5 ARF5 chr7 127229181 ARF5 chr7 127229196 Exonic hg19 NA G30809 Out-of-frame Intra-chr q32.1 q32.1 107294 ChimerSeq ChiTaRs ChiTaRs PTGDS-HIP1R PTGDS chr9 139872044 HIP1R chr12 123343442 Exonic hg19 NA CB153680 Out-of-frame Inter-chr q34.3 q24.31 Seq+ 107295 ChimerSeq ChiTaRs ChiTaRs SREK1-SREK1 SREK1 chr5 65470821 SREK1 chr5 65466745 Exonic hg19 NA AW087368 Out-of-frame Intra-chr q12.3 q12.3 107296 ChimerSeq ChiTaRs ChiTaRs AP2M1-AP2M1 AP2M1 chr3 183899716 AP2M1 chr3 183894790 Exonic hg19 NA AW996595 Out-of-frame Intra-chr q27.1 q27.1 107297 ChimerSeq ChiTaRs ChiTaRs ZNF853-COX6B1 ZNF853 chr7 6663353 COX6B1 chr19 36139234 Exonic hg19 NA AW411483 Out-of-frame Inter-chr p22.1 Transcription factor q13.12 107298 ChimerSeq ChiTaRs ChiTaRs FCRL1-ILF2 FCRL1 chr1 157789878 ILF2 chr1 153636893 Exonic hg19 NA CD703668 Out-of-frame Intra-chr q23.1 q21.3 107299 ChimerSeq ChiTaRs ChiTaRs ARHGAP15-FBXO2 ARHGAP15 chr2 144461045 FBXO2 chr1 11708456 Exonic hg19 NA AW895722 Out-of-frame Inter-chr q22.2 p36.22 107300 ChimerSeq ChiTaRs ChiTaRs CAPZB-CAPZB CAPZB chr1 19811985 CAPZB chr1 19705110 Exonic hg19 NA BF987221 Out-of-frame Intra-chr p36.13 p36.13 107301 ChimerSeq ChiTaRs ChiTaRs SUCLG2-RBP4 SUCLG2 chr3 67454832 RBP4 chr10 95353763 Exonic hg19 NA AV660800 Out-of-frame Inter-chr p14.1 q23.33 107302 ChimerSeq ChiTaRs ChiTaRs NOL7-USP22 NOL7 chr6 13620706 USP22 chr17 20904931 Exonic hg19 NA BG977182 Out-of-frame Inter-chr p23 Tumor suppressor gene p11.2 107303 ChimerSeq ChiTaRs ChiTaRs L3MBTL3-L3MBTL3 L3MBTL3 chr6 130374136 L3MBTL3 chr6 130376315 Exonic hg19 NA BQ352612 In-Frame Intra-chr q23.1 Transcription factor q23.1 Transcription factor 107304 ChimerSeq ChiTaRs ChiTaRs ANAPC16-NR4A1 ANAPC16 chr10 73822406 NR4A1 chr12 52447594 Exonic hg19 NA BF928744 Out-of-frame Inter-chr q22.1 q13.13 Tumor suppressor gene Transcription factor 107305 ChimerSeq ChiTaRs ChiTaRs HSPB1-EGR1 HSPB1 chr7 75933895 EGR1 chr5 137801706 Exonic hg19 NA AA903814 Out-of-frame Inter-chr q11.23 q31.2 Tumor suppressor gene Transcription factor 107306 ChimerSeq ChiTaRs ChiTaRs STIM1-VAMP2 STIM1 chr11 4109891 VAMP2 chr17 8062753 Exonic hg19 NA BE764151 Out-of-frame Inter-chr p15.4 p13.1 107307 ChimerSeq ChiTaRs ChiTaRs REPS1-GTPBP1 REPS1 chr6 139233973 GTPBP1 chr22 39127493 Exonic hg19 NA BF805059 Out-of-frame Inter-chr q24.1 q13.1 107308 ChimerSeq ChiTaRs ChiTaRs FRYL-MLL FRYL chr4 48533362 MLL chr11 118359327 Exonic hg19 NA DQ299936 Out-of-frame Inter-chr p11 q23.3 107309 ChimerSeq ChiTaRs ChiTaRs HCFC1-HCFC1 HCFC1 chrX 153220827 HCFC1 chrX 153220922 Exonic hg19 NA AW836706 Out-of-frame Intra-chr q28 q28 107310 ChimerSeq ChiTaRs ChiTaRs ACTR1A-SLC2A1 ACTR1A chr10 104240595 SLC2A1 chr1 43396338 Exonic hg19 NA AW366615 Out-of-frame Inter-chr q24.32 p34.2 107311 ChimerSeq ChiTaRs ChiTaRs WDR43-SACM1L WDR43 chr2 29136613 SACM1L chr3 45730927 Exonic hg19 NA DA761308 Out-of-frame Inter-chr p23.2 p21.31 107312 ChimerSeq ChiTaRs ChiTaRs PEX2-MLX PEX2 chr8 77898518 MLX chr17 40724251 Exonic hg19 NA AW881454 Out-of-frame Inter-chr q21.13 q21.2 Transcription factor 107313 ChimerSeq ChiTaRs ChiTaRs ADCYAP1R1-MACF1 ADCYAP1R1 chr7 31149520 MACF1 chr1 39548010 Exonic hg19 NA BE699333 Out-of-frame Inter-chr p14.3 p34.3 107314 ChimerSeq ChiTaRs ChiTaRs RPLP2-RPLP2 RPLP2 chr11 810241 RPLP2 chr11 810304 Exonic hg19 NA BF813426 Out-of-frame Intra-chr p15.5 p15.5 107315 ChimerSeq ChiTaRs ChiTaRs DEFA1-DGCR8 DEFA1 chr8 6875823 DGCR8 chr22 20079773 Exonic hg19 NA BF896040 5'UTR-CDS Inter-chr p23.1 q11.21 107316 ChimerSeq ChiTaRs ChiTaRs ACTA1-SYVN1 ACTA1 chr1 229568179 SYVN1 chr11 64897538 Exonic hg19 NA BG994562 Out-of-frame Inter-chr q42.13 q13.1 107317 ChimerSeq ChiTaRs ChiTaRs DUSP1-GLI3 DUSP1 chr5 172195904 GLI3 chr7 42187831 Exonic hg19 NA BE181536 Out-of-frame Inter-chr q35.1 Tumor suppressor gene p14.1 Transcription factor 107318 ChimerSeq ChiTaRs ChiTaRs PGK1-TP53BP1 PGK1 chrX 77380895 TP53BP1 chr15 43705436 Exonic hg19 NA BQ349520 Out-of-frame Inter-chr q21.1 q15.3 Tumor suppressor gene 107319 ChimerSeq ChiTaRs ChiTaRs SEC16B-SEC16B SEC16B chr1 177906406 SEC16B chr1 177911068 Exonic hg19 NA BX494775 Out-of-frame Intra-chr q25.2 q25.2 107320 ChimerSeq ChiTaRs ChiTaRs CACNA1D-CACNA1D CACNA1D chr3 53651969 CACNA1D chr3 53658487 Exonic hg19 NA AW997267 Out-of-frame Intra-chr p21.1 p21.1 107321 ChimerSeq ChiTaRs ChiTaRs SQSTM1-HSD17B8 SQSTM1 chr5 179260105 HSD17B8 chr6 4406730 Exonic hg19 NA BF765619 Out-of-frame Inter-chr q35.3 107322 ChimerSeq ChiTaRs ChiTaRs NFE2L2-NFE2L2 NFE2L2 chr2 178095835 NFE2L2 chr2 178095841 Exonic hg19 NA CA310947 Out-of-frame Intra-chr q31.2 Oncogene Transcription factor q31.2 Oncogene Transcription factor 107323 ChimerSeq ChiTaRs ChiTaRs TMEM30A-TPRG1L TMEM30A chr6 75994501 TPRG1L chr1 3542042 Exonic hg19 NA DB167187 Out-of-frame Inter-chr q14.1 p36.32 107324 ChimerSeq ChiTaRs ChiTaRs PSAP-CAPG PSAP chr10 73576496 CAPG chr2 85621900 Exonic hg19 NA BG993981 Out-of-frame Inter-chr q22.1 p11.2 Tumor suppressor gene 107325 ChimerSeq ChiTaRs ChiTaRs SSU72-TNXB SSU72 chr1 1489444 TNXB chr6 3310596 Exonic hg19 NA BI011793 Out-of-frame Inter-chr p36.33 107326 ChimerSeq ChiTaRs ChiTaRs MST1R-SIPA1L3 MST1R chr3 49924847 SIPA1L3 chr19 38655221 Exonic hg19 NA BF772180 Out-of-frame Inter-chr p21.31 Tumor suppressor gene q13.13 107327 ChimerSeq ChiTaRs ChiTaRs ARHGEF3-MALAT1 ARHGEF3 chr3 56763323 MALAT1 chr11 65267106 Exonic hg19 NA DW428887 Out-of-frame Inter-chr p14.3 q13.1 107328 ChimerSeq ChiTaRs ChiTaRs H6PD-EPHB2 H6PD chr1 9322641 EPHB2 chr1 23060277 Exonic hg19 NA BF738618 Out-of-frame Intra-chr p36.22 p36.12 Tumor suppressor gene 107329 ChimerSeq ChiTaRs ChiTaRs RAB1A-BCL11A RAB1A chr2 65357178 BCL11A chr2 60689402 Exonic hg19 NA DR001100 Out-of-frame Intra-chr p14 p16.1 Oncogene Transcription factor 107330 ChimerSeq ChiTaRs ChiTaRs ZNF462-ARL17A ZNF462 chr9 109697870 ARL17A chr17 520639 Exonic hg19 NA BQ638444 Out-of-frame Inter-chr q31.2 Transcription factor q21.31 107331 ChimerSeq ChiTaRs ChiTaRs DST-GLB1 DST chr6 56324065 GLB1 chr3 33093401 Exonic hg19 NA BF931760 Out-of-frame Inter-chr p12.1 Oncogene p22.3 107332 ChimerSeq ChiTaRs ChiTaRs SMC1A-SEC31A SMC1A chrX 53449656 SEC31A chr4 83748664 Exonic hg19 NA DT220653 Out-of-frame Inter-chr p11.22 q21.22 107333 ChimerSeq ChiTaRs ChiTaRs HLA-B-RPL3 HLA-B chr6 2581571 RPL3 chr22 39710699 Exonic hg19 NA BQ923637 Out-of-frame Inter-chr q13.1 107334 ChimerSeq ChiTaRs ChiTaRs SRRM1-DDX17 SRRM1 chr1 24975499 DDX17 chr22 38894534 Exonic hg19 NA AW205256 Out-of-frame Inter-chr p36.11 q13.1 107335 ChimerSeq ChiTaRs ChiTaRs HSP90AB1-DNAJC21 HSP90AB1 chr6 44218221 DNAJC21 chr5 34939013 Exonic hg19 NA BM750525 Out-of-frame Inter-chr p21.1 Oncogene p13.2 107336 ChimerSeq ChiTaRs ChiTaRs SPI1-SPI1 SPI1 chr11 47379008 SPI1 chr11 47382685 Exonic hg19 NA BI004219 Out-of-frame Intra-chr p11.2 Tumor suppressor gene Transcription factor p11.2 Tumor suppressor gene Transcription factor 107337 ChimerSeq ChiTaRs ChiTaRs OR1N1-TMEM132A OR1N1 chr9 125288822 TMEM132A chr11 60701345 Exonic hg19 NA BF326121 Out-of-frame Inter-chr q33.2 q12.2 107338 ChimerSeq ChiTaRs ChiTaRs HNRNPUL2-TNFAIP1 HNRNPUL2 chr11 62482282 TNFAIP1 chr17 26666548 Exonic hg19 NA AI570637 Out-of-frame Inter-chr q12.3 q11.2 107339 ChimerSeq ChiTaRs ChiTaRs TNRC18-ADAP1 TNRC18 chr7 5464284 ADAP1 chr7 939111 Exonic hg19 NA DA282536 Out-of-frame Intra-chr p22.1 p22.3 107340 ChimerSeq ChiTaRs ChiTaRs DES-PFN1 DES chr2 220291320 PFN1 chr17 4850044 Exonic hg19 NA AA243735 Out-of-frame Inter-chr q35 p13.2 Tumor suppressor gene 107341 ChimerSeq ChiTaRs ChiTaRs MOGS-MOGS MOGS chr2 74689596 MOGS chr2 74688425 Exonic hg19 NA BG979303 Out-of-frame Intra-chr p13.1 p13.1 107342 ChimerSeq ChiTaRs ChiTaRs AGTRAP-ERP44 AGTRAP chr1 11807015 ERP44 chr9 102747301 Exonic hg19 NA CB163938 Out-of-frame Inter-chr p36.22 q31.1 107343 ChimerSeq ChiTaRs ChiTaRs ZNF800-UBA2 ZNF800 chr7 127013933 UBA2 chr19 34945360 Exonic hg19 NA DA140191 Out-of-frame Inter-chr q31.33 Transcription factor q13.11 107344 ChimerSeq ChiTaRs ChiTaRs AMBRA1-EVL AMBRA1 chr11 46450333 EVL chr14 100610523 Exonic hg19 NA CA336277 Out-of-frame Inter-chr p11.2 q32.2 107345 ChimerSeq ChiTaRs ChiTaRs AKAP9-AKAP9 AKAP9 chr7 91732433 AKAP9 chr7 91725926 Exonic hg19 NA BM930492 Out-of-frame Intra-chr q21.2 Oncogene q21.2 Oncogene 107346 ChimerSeq ChiTaRs ChiTaRs EEF1D-EEF1D EEF1D chr8 144663465 EEF1D chr8 144663430 Exonic hg19 NA BG955510 Out-of-frame Intra-chr 107347 ChimerSeq ChiTaRs ChiTaRs RPL11-KDM5C RPL11 chr1 24022908 KDM5C chrX 53222271 Exonic hg19 NA AA447363 Out-of-frame Inter-chr p36.11 Tumor suppressor gene p11.22 Oncogene 107348 ChimerSeq ChiTaRs ChiTaRs PPT2-PPT2 PPT2 chr6 3481990 PPT2 chr6 3481986 Exonic hg19 NA BI011292 Out-of-frame Intra-chr 107349 ChimerSeq ChiTaRs ChiTaRs SFTPC-SFTPC SFTPC chr8 22021987 SFTPC chr8 22021792 Exonic hg19 NA BQ016733 Out-of-frame Intra-chr p21.3 p21.3 107350 ChimerSeq ChiTaRs ChiTaRs PTPRD-RBM39 PTPRD chr9 10612484 RBM39 chr20 34309741 Exonic hg19 NA DC352594 Out-of-frame Inter-chr Oncogene Tumor suppressor gene q11.22 107351 ChimerSeq ChiTaRs ChiTaRs FAM81B-MALAT1 FAM81B chr5 94759273 MALAT1 chr11 65266865 Exonic hg19 NA GW493199 Out-of-frame Inter-chr q15 q13.1 107352 ChimerSeq ChiTaRs ChiTaRs FGFR1-RAD23A FGFR1 chr8 38270980 RAD23A chr19 13064388 Exonic hg19 NA CN276696 Out-of-frame Inter-chr p11.23 TK:FGFR Oncogene p13.13 107353 ChimerSeq ChiTaRs ChiTaRs MYOT-SF1 MYOT chr5 137089013 SF1 chr11 64533519 Exonic hg19 NA CN287481 Out-of-frame Inter-chr q31.2 q13.1 107354 ChimerSeq ChiTaRs ChiTaRs SOX4-SOX4 SOX4 chr6 21595055 SOX4 chr6 21594026 Exonic hg19 NA AI942449 Out-of-frame Intra-chr p22.3 Transcription factor p22.3 Transcription factor 107355 ChimerSeq ChiTaRs ChiTaRs RHOBTB1-ZRANB3 RHOBTB1 chr10 62756252 ZRANB3 chr2 135965017 Exonic hg19 NA BF377908 Out-of-frame Inter-chr q21.2 q21.3 107356 ChimerSeq ChiTaRs ChiTaRs COPG1-CPM COPG1 chr3 128996218 CPM chr12 69265563 Exonic hg19 NA AW889773 Out-of-frame Inter-chr q21.3 q15 107357 ChimerSeq ChiTaRs ChiTaRs CAT-MARK3 CAT chr11 34480266 MARK3 chr14 103958203 Exonic hg19 NA BI028162 Out-of-frame Inter-chr p13 Tumor suppressor gene q32.32 CAMK:CAMKL 107358 ChimerSeq ChiTaRs ChiTaRs SPRR1A-KRT23 SPRR1A chr1 152957964 KRT23 chr17 39084596 Exonic hg19 NA BE185492 Out-of-frame Inter-chr q21.3 107359 ChimerSeq ChiTaRs ChiTaRs ARID1A-ARID1A ARID1A chr1 27101283 ARID1A chr1 27101280 Exonic hg19 NA BF990251 Out-of-frame Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 Oncogene Tumor suppressor gene 107360 ChimerSeq ChiTaRs ChiTaRs ST6GALNAC3-SEC14L1 ST6GALNAC3 chr1 76907458 SEC14L1 chr17 75202737 Exonic hg19 NA BF093713 Out-of-frame Inter-chr p31.1 q25.2 107361 ChimerSeq ChiTaRs ChiTaRs RPL11-TMCO6 RPL11 chr1 24022336 TMCO6 chr5 140021281 Exonic hg19 NA CN269184 Out-of-frame Inter-chr p36.11 Tumor suppressor gene q31.3 107362 ChimerSeq ChiTaRs ChiTaRs CD74-TPP1 CD74 chr5 149792314 TPP1 chr11 6638563 Exonic hg19 NA DB123887 Out-of-frame Inter-chr q33.1 p15.4 107363 ChimerSeq ChiTaRs ChiTaRs SLC20A2-SLC20A2 SLC20A2 chr8 42274681 SLC20A2 chr8 42274664 Exonic hg19 NA BE162973 Out-of-frame Intra-chr p11.21 p11.21 107364 ChimerSeq ChiTaRs ChiTaRs MED27-MED27 MED27 chr9 134735568 MED27 chr9 134735616 Exonic hg19 NA AI702094 Out-of-frame Intra-chr q34.13 q34.13 107365 ChimerSeq ChiTaRs ChiTaRs HOTAIRM1-RANBP3 HOTAIRM1 chr7 27135947 RANBP3 chr19 5978097 Exonic hg19 NA DA585211 Out-of-frame Inter-chr p15.2 p13.3 107366 ChimerSeq ChiTaRs ChiTaRs REV3L-TXLNB REV3L chr6 111694979 TXLNB chr6 139562340 Exonic hg19 NA BG393386 Out-of-frame Intra-chr q21 q24.1 107367 ChimerSeq ChiTaRs ChiTaRs ITPR3-ITPR3 ITPR3 chr6 33663532 ITPR3 chr6 33661414 Exonic hg19 NA AA507809 Out-of-frame Intra-chr p21.31 p21.31 107368 ChimerSeq ChiTaRs ChiTaRs NCL-PSMA7 NCL chr2 232325571 PSMA7 chr20 60713257 Exonic hg19 NA EC492083 Out-of-frame Inter-chr q37.1 q13.33 107369 ChimerSeq ChiTaRs ChiTaRs SEMA6A-DLG5 SEMA6A chr5 115782170 DLG5 chr10 79572329 Exonic hg19 NA BF990533 Out-of-frame Inter-chr q23.1 q22.3 107370 ChimerSeq ChiTaRs ChiTaRs LINC00340-PSMD11 LINC00340 chr6 22054105 PSMD11 chr17 30800904 Exonic hg19 NA AI291788 Out-of-frame Inter-chr q11.2 107371 ChimerSeq ChiTaRs ChiTaRs MOBP-BOLA2 MOBP chr3 39567238 BOLA2 chr16 30078851 Exonic hg19 NA BF932390 Out-of-frame Inter-chr p22.1 p11.2 107372 ChimerSeq ChiTaRs ChiTaRs TTYH3-SNX22 TTYH3 chr7 2701944 SNX22 chr15 64449048 Exonic hg19 NA BF229264 Out-of-frame Inter-chr p22.3 q22.31 107373 ChimerSeq ChiTaRs ChiTaRs SMYD2-SMYD2 SMYD2 chr1 214507625 SMYD2 chr1 214504321 Exonic hg19 NA AA506912 Out-of-frame Intra-chr q32.3 q32.3 107374 ChimerSeq ChiTaRs ChiTaRs JAZF1-IL7 JAZF1 chr7 28220187 IL7 chr8 79674565 Exonic hg19 NA DA511456 Out-of-frame Inter-chr p15.1 Transcription factor q21.13 107375 ChimerSeq ChiTaRs ChiTaRs BRD2-YY1AP1 BRD2 chr6 4426726 YY1AP1 chr1 155658379 Exonic hg19 NA BF763209 Out-of-frame Inter-chr Atypical:BRD q22 107376 ChimerSeq ChiTaRs ChiTaRs KIAA1244-DYNC2LI1 KIAA1244 chr6 138515765 DYNC2LI1 chr2 44022906 Exonic hg19 NA CB117973 Out-of-frame Inter-chr p21 107377 ChimerSeq ChiTaRs ChiTaRs POLR2J-STARD13 POLR2J chr7 102119325 STARD13 chr13 34003915 Exonic hg19 NA BI049495 Out-of-frame Inter-chr q22.1 q13.1 Tumor suppressor gene 107378 ChimerSeq ChiTaRs ChiTaRs MICAL2-CIC MICAL2 chr11 12281735 CIC chr19 42793091 Exonic hg19 NA AW366793 Out-of-frame Inter-chr p15.3 q13.2 Oncogene Tumor suppressor gene Transcription factor 107379 ChimerSeq ChiTaRs ChiTaRs GATA4-GATA4 GATA4 chr8 11617053 GATA4 chr8 11616345 Exonic hg19 NA BM850490 Out-of-frame Intra-chr p23.1 Tumor suppressor gene Transcription factor p23.1 Tumor suppressor gene Transcription factor 107380 ChimerSeq ChiTaRs ChiTaRs SNX18-SNX18 SNX18 chr5 53841192 SNX18 chr5 53841145 Exonic hg19 NA AA745144 Out-of-frame Intra-chr q11.2 q11.2 107381 ChimerSeq ChiTaRs ChiTaRs WDR1-STX4 WDR1 chr4 10087865 STX4 chr16 31045332 Exonic hg19 NA BQ346391 Out-of-frame Inter-chr p16.1 p11.2 107382 ChimerSeq ChiTaRs ChiTaRs CLU-FER1L4 CLU chr8 27455612 FER1L4 chr20 34146589 Exonic hg19 NA BI002914 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q11.22 Tumor suppressor gene 107383 ChimerSeq ChiTaRs ChiTaRs LAMC1-GDPD5 LAMC1 chr1 183083779 GDPD5 chr11 75150958 Exonic hg19 NA BF804090 Out-of-frame Inter-chr q25.3 q13.5 107384 ChimerSeq ChiTaRs ChiTaRs LAT2-CDC25C LAT2 chr7 73639090 CDC25C chr5 137621106 Exonic hg19 NA BF911758 3'UTR-3'UTR Inter-chr q11.23 Tumor suppressor gene q31.2 107385 ChimerSeq ChiTaRs ChiTaRs TOMM40L-ARPC1A TOMM40L chr1 161196554 ARPC1A chr7 98963510 Exonic hg19 NA BE933898 Out-of-frame Inter-chr q23.3 q22.1 107386 ChimerSeq ChiTaRs ChiTaRs S100A13-ATP2B2 S100A13 chr1 153604438 ATP2B2 chr3 10738654 Exonic hg19 NA AA984232 Out-of-frame Inter-chr q21.3 p25.3 107387 ChimerSeq ChiTaRs ChiTaRs DDX18-TSPAN9 DDX18 chr2 118575166 TSPAN9 chr12 3320776 Exonic hg19 NA CB116691 Out-of-frame Inter-chr q14.1 p13.33 107388 ChimerSeq ChiTaRs ChiTaRs ORM1-TIMP2 ORM1 chr9 117086366 TIMP2 chr17 76850170 Exonic hg19 NA BI020125 Out-of-frame Inter-chr q32 q25.3 107389 ChimerSeq ChiTaRs ChiTaRs HERC3-NGLY1 HERC3 chr4 89606084 NGLY1 chr3 25778829 Exonic hg19 NA AU135833 Out-of-frame Inter-chr q22.1 p24.2 107390 ChimerSeq ChiTaRs ChiTaRs FABP6-CRK FABP6 chr5 159640827 CRK chr17 1340299 Exonic hg19 NA DB067617 Out-of-frame Inter-chr q33.3 p13.3 107391 ChimerSeq ChiTaRs ChiTaRs RPL8-LHFPL3 RPL8 chr8 146015830 LHFPL3 chr7 104381901 Exonic hg19 NA BG180082 Out-of-frame Inter-chr q24.3 q22.2 107392 ChimerSeq ChiTaRs ChiTaRs H19-DDIT4 H19 chr11 2018969 DDIT4 chr10 74035655 Exonic hg19 NA DW438966 Out-of-frame Inter-chr p15.5 Tumor suppressor gene q22.1 107393 ChimerSeq ChiTaRs ChiTaRs HLA-DQB1-PABPC1 HLA-DQB1 chr6 32634434 PABPC1 chr8 101730415 Exonic hg19 NA DA592957 Out-of-frame Inter-chr q22.3 107394 ChimerSeq ChiTaRs ChiTaRs RNF217-MRPS27 RNF217 chr6 125330430 MRPS27 chr5 71533841 Exonic hg19 NA DB085590 Out-of-frame Inter-chr q22.31 q13.2 107395 ChimerSeq ChiTaRs ChiTaRs STEAP2-COL6A2 STEAP2 chr7 89865111 COL6A2 chr21 47545844 Exonic hg19 NA DA568273 Out-of-frame Inter-chr q21.13 q22.3 107396 ChimerSeq ChiTaRs ChiTaRs PPP6C-PPM1E PPP6C chr9 127952071 PPM1E chr17 57033007 Exonic hg19 NA DA323019 Out-of-frame Inter-chr q33.3 q22 107397 ChimerSeq ChiTaRs ChiTaRs SKP1-HSPB1 SKP1 chr5 133509692 HSPB1 chr7 75932016 Exonic hg19 NA AJ710478 Out-of-frame Inter-chr q31.1 q11.23 107398 ChimerSeq ChiTaRs ChiTaRs NID1-HADHA NID1 chr1 236206197 HADHA chr2 26426936 Exonic hg19 NA AI110722 Out-of-frame Inter-chr q42.3 p23.3 107399 ChimerSeq ChiTaRs ChiTaRs ANKH-EFEMP1 ANKH chr5 14871786 EFEMP1 chr2 56093650 Exonic hg19 NA EB387503 Out-of-frame Inter-chr p15.2 p16.1 107400 ChimerSeq ChiTaRs ChiTaRs NCOA2-SLC35B4 NCOA2 chr8 71218749 SLC35B4 chr7 133984283 Exonic hg19 NA AW979049 Out-of-frame Inter-chr q13.3 Oncogene Transcription factor q33 107401 ChimerSeq ChiTaRs ChiTaRs NUDT3-SERINC5 NUDT3 chr6 34261314 SERINC5 chr5 79435485 Exonic hg19 NA AW954850 Out-of-frame Inter-chr p21.31 q14.1 107402 ChimerSeq ChiTaRs ChiTaRs CASP8-PCGF5 CASP8 chr2 202151482 PCGF5 chr10 93042097 Exonic hg19 NA AF422925 Out-of-frame Inter-chr q33.1 Oncogene Tumor suppressor gene q23.32 107403 ChimerSeq ChiTaRs ChiTaRs LOC728190-HSPD1 LOC728190 chr10 88993327 HSPD1 chr2 198352587 Exonic hg19 NA EG328792 Out-of-frame Inter-chr q33.1 Tumor suppressor gene 107404 ChimerSeq ChiTaRs ChiTaRs PLEKHA2-ISLR PLEKHA2 chr8 38831049 ISLR chr15 74466906 Exonic hg19 NA DB165900 Out-of-frame Inter-chr p11.22 q24.1 107405 ChimerSeq ChiTaRs ChiTaRs LPHN2-MIR548N LPHN2 chr1 82458107 MIR548N chr2 179410117 Exonic hg19 NA AI276476 3'UTR-5'UTR Inter-chr p14.2 107406 ChimerSeq ChiTaRs ChiTaRs TMEM37-UBAP2 TMEM37 chr2 120195646 UBAP2 chr9 33933488 Exonic hg19 NA BF884501 Out-of-frame Inter-chr q14.2 p13.3 107407 ChimerSeq ChiTaRs ChiTaRs HP1BP3-HSPA5 HP1BP3 chr1 21100628 HSPA5 chr9 127998888 Exonic hg19 NA CB149189 Out-of-frame Inter-chr p36.12 q33.3 107408 ChimerSeq ChiTaRs ChiTaRs EMX2OS-ZBTB4 EMX2OS chr10 119301807 ZBTB4 chr17 7369850 Exonic hg19 NA DB284250 Out-of-frame Inter-chr q26.11 Tumor suppressor gene Transcription factor 107409 ChimerSeq ChiTaRs ChiTaRs COL1A2-MYO1C COL1A2 chr7 94033913 MYO1C chr17 1381741 Exonic hg19 NA BP285732 Out-of-frame Inter-chr q21.3 p13.3 107410 ChimerSeq ChiTaRs ChiTaRs DNAH1-MYO5A DNAH1 chr3 52426981 MYO5A chr15 52706232 Exonic hg19 NA BI025408 Out-of-frame Inter-chr p21.1 q21.2 107411 ChimerSeq ChiTaRs ChiTaRs CPSF7-DNAJB6 CPSF7 chr11 61172051 DNAJB6 chr7 157209533 Exonic hg19 NA W74024 Out-of-frame Inter-chr q12.2 q36.3 107412 ChimerSeq ChiTaRs ChiTaRs RPS12-SERINC1 RPS12 chr6 133138012 SERINC1 chr6 122775296 Exonic hg19 NA DA436799 Out-of-frame Intra-chr q23.2 q22.31 107413 ChimerSeq ChiTaRs ChiTaRs RBM10-CTC1 RBM10 chrX 47006898 CTC1 chr17 8135044 Exonic hg19 NA DA827897 Out-of-frame Inter-chr p11.3 p13.1 107414 ChimerSeq ChiTaRs ChiTaRs PARG-KCTD14 PARG chr10 51562429 KCTD14 chr11 77726773 Exonic hg19 NA BF676418 Out-of-frame Inter-chr q11.23 q14.1 107415 ChimerSeq ChiTaRs ChiTaRs DDX41-MBP DDX41 chr5 176943958 MBP chr18 74692163 Exonic hg19 NA DA267742 Out-of-frame Inter-chr q35.3 q23 107416 ChimerSeq ChiTaRs ChiTaRs MGEA5-PCGF1 MGEA5 chr10 103577967 PCGF1 chr2 74732264 Exonic hg19 NA BF001663 Out-of-frame Inter-chr q24.32 p13.1 107417 ChimerSeq ChiTaRs ChiTaRs PLEC-EHBP1L1 PLEC chr8 144989855 EHBP1L1 chr11 65350274 Exonic hg19 NA CD365340 Out-of-frame Inter-chr q24.3 q13.1 107418 ChimerSeq ChiTaRs ChiTaRs GOLGA2-FOXA2 GOLGA2 chr9 131036195 FOXA2 chr20 22561987 Exonic hg19 NA AK075055 Out-of-frame Inter-chr q34.11 p11.21 Tumor suppressor gene Transcription factor 107419 ChimerSeq ChiTaRs ChiTaRs DNAJB2-NAP1L1 DNAJB2 chr2 220146727 NAP1L1 chr12 76448812 Exonic hg19 NA BF967465 Out-of-frame Inter-chr q35 q21.2 107420 ChimerSeq ChiTaRs ChiTaRs ARL15-CA13 ARL15 chr5 53341217 CA13 chr8 86351087 Exonic hg19 NA DA826988 Out-of-frame Inter-chr q11.2 q21.2 107421 ChimerSeq ChiTaRs ChiTaRs ST7L-MYO5A ST7L chr1 113161774 MYO5A chr15 52689578 Exonic hg19 NA DA313048 Out-of-frame Inter-chr p13.2 q21.2 107422 ChimerSeq ChiTaRs ChiTaRs MCM4-AP2M1 MCM4 chr8 48889373 AP2M1 chr3 183894805 Exonic hg19 NA CX787701 Out-of-frame Inter-chr q11.21 q27.1 107423 ChimerSeq ChiTaRs ChiTaRs HLA-DRA-PHGDH HLA-DRA chr6 3759271 PHGDH chr1 120286659 Exonic hg19 NA BE844016 Out-of-frame Inter-chr p12 107424 ChimerSeq ChiTaRs ChiTaRs MICB-UBXN7 MICB chr6 2809708 UBXN7 chr3 196080650 Exonic hg19 NA BU684700 Out-of-frame Inter-chr q29 107425 ChimerSeq ChiTaRs ChiTaRs RPA3-ME3 RPA3 chr7 7841375 ME3 chr11 86219857 Exonic hg19 NA DA168920 Out-of-frame Inter-chr p21.3 q14.2 107426 ChimerSeq ChiTaRs ChiTaRs IFI6-MAFF IFI6 chr1 27992686 MAFF chr22 38611785 Exonic hg19 NA CD367888 Out-of-frame Inter-chr p35.3 q13.1 Transcription factor 107427 ChimerSeq ChiTaRs ChiTaRs XIST-MALAT1 XIST chrX 73071719 MALAT1 chr11 65266955 Exonic hg19 NA AW903458 Out-of-frame Inter-chr q13.2 Tumor suppressor gene q13.1 107428 ChimerSeq ChiTaRs ChiTaRs SSFA2-SPARCL1 SSFA2 chr2 182795056 SPARCL1 chr4 88394670 Exonic hg19 NA AL046976 Out-of-frame Inter-chr q31.3 q22.1 Tumor suppressor gene 107429 ChimerSeq ChiTaRs ChiTaRs TEK-RPL38 TEK chr9 27190586 RPL38 chr17 72205325 Exonic hg19 NA BX101889 In-Frame Inter-chr p21.2 q25.1 107430 ChimerSeq ChiTaRs ChiTaRs MUC1-LGALS4 MUC1 chr1 155162614 LGALS4 chr19 39292986 Exonic hg19 NA AW391727 Out-of-frame Inter-chr q22 Oncogene 107431 ChimerSeq ChiTaRs ChiTaRs HIVEP3-HNRNPUL1 HIVEP3 chr1 42011314 HNRNPUL1 chr19 41808746 Exonic hg19 NA BG393394 Out-of-frame Inter-chr p34.2 Tumor suppressor gene Transcription factor q13.2 107432 ChimerSeq ChiTaRs ChiTaRs MOB2-BCYRN1 MOB2 chr11 1502116 BCYRN1 chrX 70520715 Exonic hg19 NA DA968444 Out-of-frame Inter-chr p15.5 p21 107433 ChimerSeq ChiTaRs ChiTaRs RAMP1-GANAB RAMP1 chr2 238786006 GANAB chr11 62406459 Exonic hg19 NA DA340619 Out-of-frame Inter-chr q37.3 q12.3 Tumor suppressor gene 107434 ChimerSeq ChiTaRs ChiTaRs CSGALNACT2-PDXDC1 CSGALNACT2 chr10 43650420 PDXDC1 chr16 15227443 Exonic hg19 NA CN418454 Out-of-frame Inter-chr q11.21 p13.11 107435 ChimerSeq ChiTaRs ChiTaRs HNRNPA2B1-FAM96A HNRNPA2B1 chr7 26240366 FAM96A chr15 64380889 Exonic hg19 NA DT217282 Out-of-frame Inter-chr p15.2 q22.31 107436 ChimerSeq ChiTaRs ChiTaRs PTGDS-HKR1 PTGDS chr9 139873699 HKR1 chr19 37853722 Exonic hg19 NA DA811774 Out-of-frame Inter-chr q34.3 q13.12 Transcription factor 107437 ChimerSeq ChiTaRs ChiTaRs NFKB1-ITPKB NFKB1 chr4 103504106 ITPKB chr1 226819401 Exonic hg19 NA AW965410 Out-of-frame Inter-chr q24 Oncogene Tumor suppressor gene Transcription factor q42.12 107438 ChimerSeq ChiTaRs ChiTaRs RPL23AP53-DDX21 RPL23AP53 chr8 195550 DDX21 chr10 70743978 Exonic hg19 NA AX748129 Out-of-frame Inter-chr p23.3 q22.1 107439 ChimerSeq ChiTaRs ChiTaRs EIF5A2-RAD23B EIF5A2 chr3 170625632 RAD23B chr9 110093684 Exonic hg19 NA AF262027 Out-of-frame Inter-chr q26.2 q31.2 Tumor suppressor gene 107440 ChimerSeq ChiTaRs ChiTaRs IL6-TMED10 IL6 chr7 22771050 TMED10 chr14 75598172 Exonic hg19 NA BE619286 Out-of-frame Inter-chr p15.3 Oncogene q24.3 107441 ChimerSeq ChiTaRs ChiTaRs NID1-SQRDL NID1 chr1 236148727 SQRDL chr15 45981354 Exonic hg19 NA BU581446 Out-of-frame Inter-chr q42.3 107442 ChimerSeq ChiTaRs ChiTaRs RPS24-CLASP1 RPS24 chr10 79800455 CLASP1 chr2 122122756 Exonic hg19 NA BQ027949 Out-of-frame Inter-chr q22.3 q14.3 107443 ChimerSeq ChiTaRs ChiTaRs NUCKS1-CCDC97 NUCKS1 chr1 205719294 CCDC97 chr19 41829181 Exonic hg19 NA BE562367 Out-of-frame Inter-chr q32.1 q13.2 107444 ChimerSeq ChiTaRs ChiTaRs SPIN3-RPS5 SPIN3 chrX 57018186 RPS5 chr19 58905861 Exonic hg19 NA BG929094 Out-of-frame Inter-chr p11.21 q13.43 107445 ChimerSeq ChiTaRs ChiTaRs HFM1-C11orf24 HFM1 chr1 91852879 C11orf24 chr11 68030258 Exonic hg19 NA BF814894 Out-of-frame Inter-chr p22.2 q13.2 107446 ChimerSeq ChiTaRs ChiTaRs SAYSD1-MAP2K4 SAYSD1 chr6 39082846 MAP2K4 chr17 11958202 Exonic hg19 NA DB082854 Out-of-frame Inter-chr p21.2 p12 STE:STE7 Oncogene Tumor suppressor gene 107447 ChimerSeq ChiTaRs ChiTaRs SLC20A1-FN1 SLC20A1 chr2 113421402 FN1 chr2 216274772 Exonic hg19 NA BF196993 Out-of-frame Intra-chr q14.1 q35 Oncogene 107448 ChimerSeq ChiTaRs ChiTaRs STAR-MAP7 STAR chr8 38008468 MAP7 chr6 136862458 Exonic hg19 NA BP196904 Out-of-frame Inter-chr p11.23 Tumor suppressor gene q23.3 107449 ChimerSeq ChiTaRs ChiTaRs CBX3-C15orf57 CBX3 chr7 26242642 C15orf57 chr15 40854180 Exonic hg19 NA AI344209 Out-of-frame Inter-chr p15.2 q15.1 107450 ChimerSeq ChiTaRs ChiTaRs BDP1-KDM5A BDP1 chr5 70811993 KDM5A chr12 401959 Exonic hg19 NA CB119529 Out-of-frame Inter-chr p13.33 Tumor suppressor gene 107451 ChimerSeq ChiTaRs ChiTaRs CCND3-LARP4B CCND3 chr6 42016414 LARP4B chr10 910096 Exonic hg19 NA DB230357 Out-of-frame Inter-chr p21.1 p15.3 107452 ChimerSeq ChiTaRs ChiTaRs ACOT13-CLN5 ACOT13 chr6 24705283 CLN5 chr13 77575962 Exonic hg19 NA AW020290 Out-of-frame Inter-chr p22.3 q22.3 107453 ChimerSeq ChiTaRs ChiTaRs IDO1-IPO4 IDO1 chr8 39780127 IPO4 chr14 24658579 Exonic hg19 NA BF917390 Out-of-frame Inter-chr p11.21 q12 107454 ChimerSeq ChiTaRs ChiTaRs TCOF1-EIF5A TCOF1 chr5 149778618 EIF5A chr17 7213103 Exonic hg19 NA BF883338 Out-of-frame Inter-chr q32 p13.1 107455 ChimerSeq ChiTaRs ChiTaRs CSRNP1-ZNF506 CSRNP1 chr3 39185208 ZNF506 chr19 19904360 Exonic hg19 NA AV658727 Out-of-frame Inter-chr p22.2 Tumor suppressor gene Transcription factor p13.11 Transcription factor 107456 ChimerSeq ChiTaRs ChiTaRs DAG1-APP DAG1 chr3 49548169 APP chr21 27269903 Exonic hg19 NA DA831654 Out-of-frame Inter-chr p21.31 q21.3 107457 ChimerSeq ChiTaRs ChiTaRs ENG-EMILIN1 ENG chr9 130587155 EMILIN1 chr2 27309212 Exonic hg19 NA AA565269 Out-of-frame Inter-chr q34.11 p23.3 107458 ChimerSeq ChiTaRs ChiTaRs OLFML2A-PDLIM7 OLFML2A chr9 127566520 PDLIM7 chr5 176910397 Exonic hg19 NA AK074709 Out-of-frame Inter-chr q33.3 q35.3 107459 ChimerSeq ChiTaRs ChiTaRs SNHG6-NDUFV1 SNHG6 chr8 67834783 NDUFV1 chr11 67377065 Exonic hg19 NA CB118919 Out-of-frame Inter-chr q13.1 q13.2 107460 ChimerSeq ChiTaRs ChiTaRs MTX2-AFAP1-AS1 MTX2 chr2 177134259 AFAP1-AS1 chr4 7765046 Exonic hg19 NA BU153892 Out-of-frame Inter-chr q31.1 p16.1 107461 ChimerSeq ChiTaRs ChiTaRs H2AFY-ZNF788 H2AFY chr5 134705241 ZNF788 chr19 12224136 Exonic hg19 NA BP429307 Out-of-frame Inter-chr q31.1 p13.2 Transcription factor 107462 ChimerSeq ChiTaRs ChiTaRs CTNND1-PLD5 CTNND1 chr11 57510507 PLD5 chr1 242625898 Exonic hg19 NA BQ925294 Out-of-frame Inter-chr q12.1 Tumor suppressor gene q43 107463 ChimerSeq ChiTaRs ChiTaRs SEC61A1-CCT5 SEC61A1 chr3 127790434 CCT5 chr5 10262662 Exonic hg19 NA AW105324 Out-of-frame Inter-chr q21.3 p15.2 107464 ChimerSeq ChiTaRs ChiTaRs CAMK2G-SRP72 CAMK2G chr10 75602293 SRP72 chr4 57349375 Exonic hg19 NA U81554 Out-of-frame Inter-chr q22.2 q12 107465 ChimerSeq ChiTaRs ChiTaRs SOX11-PGK1 SOX11 chr2 5838208 PGK1 chrX 77359752 Exonic hg19 NA AU142940 Out-of-frame Inter-chr p25.2 Oncogene Tumor suppressor gene Transcription factor q21.1 107466 ChimerSeq ChiTaRs ChiTaRs CGA-KDM5A CGA chr6 87795465 KDM5A chr12 390470 Exonic hg19 NA R81128 Out-of-frame Inter-chr q14.3 p13.33 Tumor suppressor gene 107467 ChimerSeq ChiTaRs ChiTaRs SNHG1-GHITM SNHG1 chr11 62623099 GHITM chr10 85899265 Exonic hg19 NA DA262270 Out-of-frame Inter-chr q12.3 q23.1 107468 ChimerSeq ChiTaRs ChiTaRs HNRPDL-MIEN1 HNRPDL chr4 83347061 MIEN1 chr17 37885538 Exonic hg19 NA AA455595 Out-of-frame Inter-chr q12 107469 ChimerSeq ChiTaRs ChiTaRs HSPA1A-FOXP1 HSPA1A chr6 3079366 FOXP1 chr3 71096093 Exonic hg19 NA AI826170 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor 107470 ChimerSeq ChiTaRs ChiTaRs ZNF692-LRP1 ZNF692 chr1 249151800 LRP1 chr12 57569304 Exonic hg19 NA BI046606 Out-of-frame Inter-chr q44 Transcription factor q13.3 107471 ChimerSeq ChiTaRs ChiTaRs CKAP5-STATH CKAP5 chr11 46867821 STATH chr4 70861681 Exonic hg19 NA AX747668 Out-of-frame Inter-chr p11.2 107472 ChimerSeq ChiTaRs ChiTaRs CNPPD1-DHCR24 CNPPD1 chr2 220037211 DHCR24 chr1 55315314 Exonic hg19 NA BE828048 Out-of-frame Inter-chr q35 p32.3 107473 ChimerSeq ChiTaRs ChiTaRs PSPH-SNRNP35 PSPH chr7 56147817 SNRNP35 chr12 123956750 Exonic hg19 NA CR936749 Out-of-frame Inter-chr p11.2 q24.31 107474 ChimerSeq ChiTaRs ChiTaRs TUBB4B-A2M TUBB4B chr9 140136997 A2M chr12 9246089 Exonic hg19 NA DB150819 Out-of-frame Inter-chr q34.3 p13.31 107475 ChimerSeq ChiTaRs ChiTaRs NUDT5-ZMYND11 NUDT5 chr10 12237878 ZMYND11 chr10 225932 Exonic hg19 NA DC322982 Out-of-frame Intra-chr p14 p15.3 Tumor suppressor gene 107476 ChimerSeq ChiTaRs ChiTaRs FEN1-SULF1 FEN1 chr11 61564710 SULF1 chr8 70501281 Exonic hg19 NA AW452409 Out-of-frame Inter-chr q12.2 q13.2 107477 ChimerSeq ChiTaRs ChiTaRs LY6E-COL15A1 LY6E chr8 144103272 COL15A1 chr9 101739151 Exonic hg19 NA CB998051 Out-of-frame Inter-chr q22.33 107478 ChimerSeq ChiTaRs ChiTaRs HFM1-SEC24A HFM1 chr1 91852950 SEC24A chr5 134010430 Exonic hg19 NA DW418469 Out-of-frame Inter-chr p22.2 q31.1 107479 ChimerSeq ChiTaRs ChiTaRs AK8-PTPN6 AK8 chr9 135649119 PTPN6 chr12 7070036 Exonic hg19 NA BF922042 Out-of-frame Inter-chr q34.13 p13.31 Tumor suppressor gene 107480 ChimerSeq ChiTaRs ChiTaRs RNU6ATAC-DDX1 RNU6ATAC chr9 137029686 DDX1 chr2 15731992 Exonic hg19 NA DA765942 5'UTR-5'UTR Inter-chr q34.2 p24.3 107481 ChimerSeq ChiTaRs ChiTaRs CALD1-HMGN2 CALD1 chr7 134617791 HMGN2 chr1 26801800 Exonic hg19 NA CN402990 Out-of-frame Inter-chr q33 p36.11 107482 ChimerSeq ChiTaRs ChiTaRs RD3-PRPF4B RD3 chr1 211665320 PRPF4B chr6 4032747 Exonic hg19 NA AU143392 Out-of-frame Inter-chr q32.3 p25.2 107483 ChimerSeq ChiTaRs ChiTaRs WARS2-RYR2 WARS2 chr1 119683416 RYR2 chr1 237850752 Exonic hg19 NA AK294729 Out-of-frame Intra-chr p12 q43 107484 ChimerSeq ChiTaRs ChiTaRs GAS5-ORMDL1 GAS5 chr1 173834036 ORMDL1 chr2 190648538 Exonic hg19 NA DA439985 Out-of-frame Inter-chr q25.1 Tumor suppressor gene q32.2 107485 ChimerSeq ChiTaRs ChiTaRs APOA1BP-DSP APOA1BP chr1 156564961 DSP chr6 7580445 Exonic hg19 NA BI060452 Out-of-frame Inter-chr p24.3 Tumor suppressor gene 107486 ChimerSeq ChiTaRs ChiTaRs H2AFZ-CD59 H2AFZ chr4 100871421 CD59 chr11 33730220 Exonic hg19 NA BC050619 Out-of-frame Inter-chr q23 p13 107487 ChimerSeq ChiTaRs ChiTaRs TRIM14-PATL1 TRIM14 chr9 100848360 PATL1 chr11 59404410 Exonic hg19 NA BF911667 Out-of-frame Inter-chr q22.33 q12.1 107488 ChimerSeq ChiTaRs ChiTaRs DARC-EMP1 DARC chr1 159176039 EMP1 chr12 13349755 Exonic hg19 NA AK309521 Out-of-frame Inter-chr p13.1 Tumor suppressor gene 107489 ChimerSeq ChiTaRs ChiTaRs JAK2-B2M JAK2 chr9 5044501 B2M chr15 45010234 Exonic hg19 NA BF819555 Out-of-frame Inter-chr p24.1 TK:JakA Oncogene Oncogene 107490 ChimerSeq ChiTaRs ChiTaRs FAIM3-SEPT9 FAIM3 chr1 207095286 2009_ 9_ 1_ chr17 75478224 Exonic hg19 NA DB165458 Out-of-frame Inter-chr 107491 ChimerSeq ChiTaRs ChiTaRs SEPT11-RPL3 2011_ 9_ 1_ chr4 77949883 RPL3 chr22 39708894 Exonic hg19 NA AL702234 Out-of-frame Inter-chr q13.1 107492 ChimerSeq ChiTaRs ChiTaRs CCNY-ZNF652 CCNY chr10 35539559 ZNF652 chr17 47395117 Exonic hg19 NA DB028252 Out-of-frame Inter-chr p11.21 q21.33 Transcription factor 107493 ChimerSeq ChiTaRs ChiTaRs MRPL43-FAM127A MRPL43 chr10 102746220 FAM127A chrX 134166473 Exonic hg19 NA BF111822 Out-of-frame Inter-chr q24.31 107494 ChimerSeq ChiTaRs ChiTaRs NCBP2-FBXL2 NCBP2 chr3 196669377 FBXL2 chr3 33400769 Exonic hg19 NA DA659977 Out-of-frame Intra-chr q29 p22.3 107495 ChimerSeq ChiTaRs ChiTaRs KIAA1919-TTTY14 KIAA1919 chr6 111588749 TTTY14 chrY 21152513 Exonic hg19 NA AK000168 Out-of-frame Inter-chr q11.222 107496 ChimerSeq ChiTaRs ChiTaRs MYO1B-PLEKHG1 MYO1B chr2 192289832 PLEKHG1 chr6 151164315 Exonic hg19 NA BP393033 Out-of-frame Inter-chr q32.3 q25.1 107497 ChimerSeq ChiTaRs ChiTaRs TNN-UBE2D1 TNN chr1 175106185 UBE2D1 chr10 60128480 Exonic hg19 NA AW363598 Out-of-frame Inter-chr q25.1 q21.1 107498 ChimerSeq ChiTaRs ChiTaRs VGLL4-UBE2E3 VGLL4 chr3 11685102 UBE2E3 chr2 181846742 Exonic hg19 NA BG756114 Out-of-frame Inter-chr p25.2 q31.3 107499 ChimerSeq ChiTaRs ChiTaRs ZNF438-ZNF438 ZNF438 chr10 31165996 ZNF438 chr10 31199326 Exonic hg19 NA AW893471 Out-of-frame Intra-chr p11.23 Transcription factor p11.23 Transcription factor 107500 ChimerSeq ChiTaRs ChiTaRs S100A2-EIF3D S100A2 chr1 153536246 EIF3D chr22 36908615 Exonic hg19 NA BE122841 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q12.3 107501 ChimerSeq ChiTaRs ChiTaRs SAA2-SAA4-BCL6 SAA2-SAA4 chr11 18270181 BCL6 chr3 187456024 Exonic hg19 NA BG567713 Out-of-frame Inter-chr p15.1 Tumor suppressor gene q27.3 107502 ChimerSeq ChiTaRs ChiTaRs CYP20A1-SPRY2 CYP20A1 chr2 204122243 SPRY2 chr13 80910678 Exonic hg19 NA BF756284 Out-of-frame Inter-chr q33.2 q31.1 Tumor suppressor gene 107503 ChimerSeq ChiTaRs ChiTaRs TBPL1-EDEM3 TBPL1 chr6 134301303 EDEM3 chr1 184662691 Exonic hg19 NA BF919684 Out-of-frame Inter-chr q23.2 Transcription factor q25.3 107504 ChimerSeq ChiTaRs ChiTaRs RAB42-EHD2 RAB42 chr1 28920812 EHD2 chr19 48245733 Exonic hg19 NA AK026009 Out-of-frame Inter-chr p35.3 q13.33 107505 ChimerSeq ChiTaRs ChiTaRs NDUFB4-RPS11 NDUFB4 chr3 120320086 RPS11 chr19 49999688 Exonic hg19 NA BM822653 Out-of-frame Inter-chr q13.33 q13.33 107506 ChimerSeq ChiTaRs ChiTaRs INO80D-NAV1 INO80D chr2 206859594 NAV1 chr1 201749654 Exonic hg19 NA AU125014 Out-of-frame Inter-chr q32.1 107507 ChimerSeq ChiTaRs ChiTaRs C4orf46-TNFAIP8L2-SCNM1 C4orf46 chr4 159593030 TNFAIP8L2-SCNM1 chr1 151138574 Exonic hg19 NA BF239160 Out-of-frame Inter-chr q32.1 Tumor suppressor gene 107508 ChimerSeq ChiTaRs ChiTaRs CITED2-UHMK1 CITED2 chr6 139695785 UHMK1 chr1 162498059 Exonic hg19 NA BG529263 5'UTR-3'UTR Inter-chr q24.1 Tumor suppressor gene q23.3 107509 ChimerSeq ChiTaRs ChiTaRs ABCA2-SYAP1 ABCA2 chr9 139907247 SYAP1 chrX 16737776 Exonic hg19 NA BI197024 Out-of-frame Inter-chr q34.3 p22.2 107510 ChimerSeq ChiTaRs ChiTaRs HMGA1-HYOU1 HMGA1 chr6 34213598 HYOU1 chr11 118914908 Exonic hg19 NA EC495420 Out-of-frame Inter-chr p21.31 Transcription factor 107511 ChimerSeq ChiTaRs ChiTaRs TMSB10-RPL4 TMSB10 chr2 85133222 RPL4 chr15 66791658 Exonic hg19 NA BU540332 Out-of-frame Inter-chr p11.2 q22.31 107512 ChimerSeq ChiTaRs ChiTaRs ENO1-CCDC90A ENO1 chr1 8928094 CCDC90A chr6 13787862 Exonic hg19 NA BM015435 Out-of-frame Inter-chr p36.23 107513 ChimerSeq ChiTaRs ChiTaRs ARL15-ASCC3 ARL15 chr5 53606403 ASCC3 chr6 101054650 Exonic hg19 NA DA153697 5'UTR-CDS Inter-chr q11.2 q16.3 107514 ChimerSeq ChiTaRs ChiTaRs ATP5I-MALAT1 ATP5I chr4 667175 MALAT1 chr11 65267017 Exonic hg19 NA DW431899 Out-of-frame Inter-chr p16.3 q13.1 107515 ChimerSeq ChiTaRs ChiTaRs MAP9-CACNB2 MAP9 chr4 156298122 CACNB2 chr10 18802449 Exonic hg19 NA DA505169 5'UTR-CDS Inter-chr q32.1 p12.33 107516 ChimerSeq ChiTaRs ChiTaRs NPHP1-RAMP2 NPHP1 chr2 110922073 RAMP2 chr17 40914931 Exonic hg19 NA AW206715 Out-of-frame Inter-chr q13 q21.2 107517 ChimerSeq ChiTaRs ChiTaRs HACL1-ZZEF1 HACL1 chr3 15604937 ZZEF1 chr17 3926423 Exonic hg19 NA AI969337 Out-of-frame Inter-chr p25.1 p13.2 107518 ChimerSeq ChiTaRs ChiTaRs ACTG2-ERCC2 ACTG2 chr2 74146780 ERCC2 chr19 45861543 Exonic hg19 NA AI682411 3'UTR-3'UTR Inter-chr p13.1 q13.32 Oncogene 107519 ChimerSeq ChiTaRs ChiTaRs RPL37A-HCK RPL37A chr2 217366190 HCK chr20 30659522 Exonic hg19 NA CD365929 Out-of-frame Inter-chr q35 q11.21 TK:Src 107520 ChimerSeq ChiTaRs ChiTaRs ATXN7-EPS8 ATXN7 chr3 63936969 EPS8 chr12 15784441 Exonic hg19 NA AI272316 Out-of-frame Inter-chr p14.1 p12.3 107521 ChimerSeq ChiTaRs ChiTaRs C7orf25-RALB C7orf25 chr7 42956724 RALB chr2 121051929 Exonic hg19 NA AI190624 Out-of-frame Inter-chr p14.1 q14.2 107522 ChimerSeq ChiTaRs ChiTaRs PMS2P1-TBX18 PMS2P1 chr7 99933584 TBX18 chr6 85446041 Exonic hg19 NA AK308860 Out-of-frame Inter-chr q22.1 q14.3 Transcription factor 107523 ChimerSeq ChiTaRs ChiTaRs AMD1-ECHDC1 AMD1 chr6 111196418 ECHDC1 chr6 127611236 Exonic hg19 NA CN399561 In-Frame Intra-chr q21 q22.33 107524 ChimerSeq ChiTaRs ChiTaRs EIF4H-H2AFY EIF4H chr7 73609960 H2AFY chr5 134681668 Exonic hg19 NA BM479877 Out-of-frame Inter-chr q11.23 q31.1 107525 ChimerSeq ChiTaRs ChiTaRs TSNAX-HECA TSNAX chr1 231701200 HECA chr6 139499988 Exonic hg19 NA CD252017 Out-of-frame Inter-chr q42.2 q24.1 Tumor suppressor gene 107526 ChimerSeq ChiTaRs ChiTaRs LAMC1-LAMC1 LAMC1 chr1 183048342 LAMC1 chr1 183003441 Exonic hg19 NA AW856573 Out-of-frame Intra-chr q25.3 q25.3 107527 ChimerSeq ChiTaRs ChiTaRs DHFR-LSP1 DHFR chr5 79946450 LSP1 chr11 1874307 Exonic hg19 NA M33552 Out-of-frame Inter-chr q14.1 p15.5 107528 ChimerSeq ChiTaRs ChiTaRs EIF4G1-TPM2 EIF4G1 chr3 184040401 TPM2 chr9 35685510 Exonic hg19 NA AW859459 Out-of-frame Inter-chr q27.1 p13.3 107529 ChimerSeq ChiTaRs ChiTaRs GNL3-PI4KA GNL3 chr3 52724720 PI4KA chr22 21081519 Exonic hg19 NA AK297634 In-Frame Inter-chr p21.1 q11.21 107530 ChimerSeq ChiTaRs ChiTaRs WDR74-TMCC2 WDR74 chr11 62609281 TMCC2 chr1 205238351 Exonic hg19 NA DA740744 Out-of-frame Inter-chr q12.3 q32.1 107531 ChimerSeq ChiTaRs ChiTaRs PLEC-LARP7 PLEC chr8 144989526 LARP7 chr4 113568593 Exonic hg19 NA BQ002100 Out-of-frame Inter-chr q24.3 q25 107532 ChimerSeq ChiTaRs ChiTaRs AFF3-SAP130 AFF3 chr2 100722509 SAP130 chr2 128770690 Exonic hg19 NA DA775410 Out-of-frame Intra-chr q11.2 Oncogene q14.3 107533 ChimerSeq ChiTaRs ChiTaRs HOTAIRM1-RNF10 HOTAIRM1 chr7 27135949 RNF10 chr12 120972315 Exonic hg19 NA DA759691 Out-of-frame Inter-chr p15.2 q24.31 107534 ChimerSeq ChiTaRs ChiTaRs FN1-CSH2 FN1 chr2 216242986 CSH2 chr17 61950090 Exonic hg19 NA AA368559 Out-of-frame Inter-chr q35 Oncogene q23.3 107535 ChimerSeq ChiTaRs ChiTaRs BMPER-ADAM22 BMPER chr7 33944715 ADAM22 chr7 87563702 Exonic hg19 NA AB009671 Out-of-frame Intra-chr p14.3 q21.12 107536 ChimerSeq ChiTaRs ChiTaRs WBP5-RNF38 WBP5 chrX 102612674 RNF38 chr9 36369801 Exonic hg19 NA AW366386 Out-of-frame Inter-chr p13.2 107537 ChimerSeq ChiTaRs ChiTaRs LAMA4-IGFBP4 LAMA4 chr6 112512946 IGFBP4 chr17 38609305 Exonic hg19 NA CO245280 Out-of-frame Inter-chr q21 q21.2 Tumor suppressor gene 107538 ChimerSeq ChiTaRs ChiTaRs NUCKS1-TBL1X NUCKS1 chr1 205719310 TBL1X chrX 9652080 Exonic hg19 NA DA634796 Out-of-frame Inter-chr q32.1 p22.31 107539 ChimerSeq ChiTaRs ChiTaRs CD164-FAM168B CD164 chr6 109689562 FAM168B chr2 131806709 Exonic hg19 NA DA568574 Out-of-frame Inter-chr q21 q21.1 107540 ChimerSeq ChiTaRs ChiTaRs EIF2S3-HNRNPA3 EIF2S3 chrX 24095226 HNRNPA3 chr2 178087487 Exonic hg19 NA AI830759 Out-of-frame Inter-chr p22.11 q31.2 107541 ChimerSeq ChiTaRs ChiTaRs SYNE1-PCBD2 SYNE1 chr6 152702451 PCBD2 chr5 134259993 Exonic hg19 NA AK056122 Out-of-frame Inter-chr q25.2 Oncogene q31.1 107542 ChimerSeq ChiTaRs ChiTaRs NDUFA4-RNU5F-1 NDUFA4 chr7 10979792 RNU5F-1 chr1 220178660 Exonic hg19 NA AU133746 Out-of-frame Inter-chr p21.3 p34.1 107543 ChimerSeq ChiTaRs ChiTaRs NBPF14-NBPF11 NBPF14 chr1 145039827 NBPF11 chr1 147917467 Exonic hg19 NA U51694 Out-of-frame Intra-chr q21.2 q21.2 107544 ChimerSeq ChiTaRs ChiTaRs NEB-RIPK4 NEB chr2 152470872 RIPK4 chr21 43165932 Exonic hg19 NA BE717731 Out-of-frame Inter-chr q23.3 q22.3 107545 ChimerSeq ChiTaRs ChiTaRs CDKN1A-GAPDH CDKN1A chr6 36654550 GAPDH chr12 6643705 Exonic hg19 NA BI117444 Out-of-frame Inter-chr p21.2 Tumor suppressor gene p13.31 107546 ChimerSeq ChiTaRs ChiTaRs LDB3-GABARAPL1 LDB3 chr10 88428449 GABARAPL1 chr12 10374464 Exonic hg19 NA DA892797 Out-of-frame Inter-chr q23.2 p13.2 107547 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-MAGED2 INS-IGF2 chr11 2153626 MAGED2 chrX 54842376 Exonic hg19 NA W04212 Out-of-frame Inter-chr p15.5 p11.21 Oncogene 107548 ChimerSeq ChiTaRs ChiTaRs MRS2-CXXC1 MRS2 chr6 24425083 CXXC1 chr18 47808716 Exonic hg19 NA BM750243 Out-of-frame Inter-chr p22.3 q21.1 Transcription factor 107549 ChimerSeq ChiTaRs ChiTaRs BGN-NCL BGN chrX 152775004 NCL chr2 232321418 Exonic hg19 NA BU617112 3'UTR-CDS Inter-chr q28 q37.1 107550 ChimerSeq ChiTaRs ChiTaRs NHS-MYL6 NHS chrX 17750797 MYL6 chr12 56552146 Exonic hg19 NA AK026164 Out-of-frame Inter-chr p22.2 q13.2 107551 ChimerSeq ChiTaRs ChiTaRs NCOA7-L3MBTL3 NCOA7 chr6 126136552 L3MBTL3 chr6 130387497 Exonic hg19 NA AX747709 5'UTR-CDS Intra-chr q22.31 q23.1 Transcription factor 107552 ChimerSeq ChiTaRs ChiTaRs CD28-KANSL2 CD28 chr2 204571472 KANSL2 chr12 49048220 Exonic hg19 NA CR989260 Out-of-frame Inter-chr q33.2 q13.11 107553 ChimerSeq ChiTaRs ChiTaRs MCL1-GARS MCL1 chr1 150551767 GARS chr7 30671106 Exonic hg19 NA AI991710 Out-of-frame Inter-chr q21.2 Oncogene p14.3 107554 ChimerSeq ChiTaRs ChiTaRs COL3A1-AMOT COL3A1 chr2 189839269 AMOT chrX 112058654 Exonic hg19 NA AL599526 Out-of-frame Inter-chr q32.2 q23 107555 ChimerSeq ChiTaRs ChiTaRs OSBPL3-FOXA1 OSBPL3 chr7 24846412 FOXA1 chr14 38060578 Exonic hg19 NA AA371447 Out-of-frame Inter-chr p15.3 q21.1 Tumor suppressor gene Transcription factor 107556 ChimerSeq ChiTaRs ChiTaRs PDLIM7-UPF1 PDLIM7 chr5 176910496 UPF1 chr19 18978624 Exonic hg19 NA AI080584 Out-of-frame Inter-chr q35.3 p13.11 107557 ChimerSeq ChiTaRs ChiTaRs HAPLN2-MBP HAPLN2 chr1 156593369 MBP chr18 74692405 Exonic hg19 NA DA270267 Out-of-frame Inter-chr q23.1 q23 107558 ChimerSeq ChiTaRs ChiTaRs CD59-CD59 CD59 chr11 33728097 CD59 chr11 33728451 Exonic hg19 NA AI418396 Out-of-frame Intra-chr p13 p13 107559 ChimerSeq ChiTaRs ChiTaRs ACTB-RPS16 ACTB chr7 5570222 RPS16 chr19 39924323 Exonic hg19 NA BG773769 Out-of-frame Inter-chr p22.1 q13.2 107560 ChimerSeq ChiTaRs ChiTaRs UFC1-RHEB UFC1 chr1 161123911 RHEB chr7 151168502 Exonic hg19 NA AA205051 Out-of-frame Inter-chr q23.3 q36.1 Oncogene 107561 ChimerSeq ChiTaRs ChiTaRs EEF1D-UBE2L3 EEF1D chr8 144679583 UBE2L3 chr22 21947150 Exonic hg19 NA DB154094 Out-of-frame Inter-chr q11.21 107562 ChimerSeq ChiTaRs ChiTaRs RPS6-MAP2K1 RPS6 chr9 19378818 MAP2K1 chr15 66738791 Exonic hg19 NA CD520454 Out-of-frame Inter-chr p22.1 q22.31 STE:STE7 Oncogene 107563 ChimerSeq ChiTaRs ChiTaRs HIST1H2BH-EEF1A1 HIST1H2BH chr6 26252301 EEF1A1 chr6 74229678 Exonic hg19 NA DA616590 Out-of-frame Intra-chr p22.2 q13 Tumor suppressor gene 107564 ChimerSeq ChiTaRs ChiTaRs SNX12-MMP2 SNX12 chrX 70279968 MMP2 chr16 55525772 Exonic hg19 NA DA812017 Out-of-frame Inter-chr q13.1 q12.2 Oncogene 107565 ChimerSeq ChiTaRs ChiTaRs DCTN1-OGDH DCTN1 chr2 74598703 OGDH chr7 44748019 Exonic hg19 NA BF851199 Out-of-frame Inter-chr p13.1 p13 107566 ChimerSeq ChiTaRs ChiTaRs RNF11-NLRP7 RNF11 chr1 51738009 NLRP7 chr19 55476712 Exonic hg19 NA DA412352 Out-of-frame Inter-chr p32.3 107567 ChimerSeq ChiTaRs ChiTaRs GPX7-CTGF GPX7 chr1 53074032 CTGF chr6 132270038 Exonic hg19 NA CV329033 Out-of-frame Inter-chr p32.3 q23.2 Tumor suppressor gene 107568 ChimerSeq ChiTaRs ChiTaRs ARF1-PLCD4 ARF1 chr1 228286910 PLCD4 chr2 219500615 Exonic hg19 NA BQ183357 Out-of-frame Inter-chr q42.13 Tumor suppressor gene q35 107569 ChimerSeq ChiTaRs ChiTaRs FBXL7-ZNF644 FBXL7 chr5 15616116 ZNF644 chr1 91454687 Exonic hg19 NA N88767 Out-of-frame Inter-chr p15.1 p22.2 Transcription factor 107570 ChimerSeq ChiTaRs ChiTaRs AHCYL2-YME1L1 AHCYL2 chr7 129050272 YME1L1 chr10 27412476 Exonic hg19 NA DA731128 Out-of-frame Inter-chr q32.1 p12.1 107571 ChimerSeq ChiTaRs ChiTaRs ARAP3-BSDC1 ARAP3 chr5 141036198 BSDC1 chr1 32834845 Exonic hg19 NA BQ335751 Out-of-frame Inter-chr q31.3 p35.1 107572 ChimerSeq ChiTaRs ChiTaRs NCL-ARIH2 NCL chr2 232326344 ARIH2 chr3 48965029 Exonic hg19 NA AU133978 Out-of-frame Inter-chr q37.1 p21.31 107573 ChimerSeq ChiTaRs ChiTaRs HSPB1-STXBP1 HSPB1 chr7 75933612 STXBP1 chr9 130454104 Exonic hg19 NA BU737515 Out-of-frame Inter-chr q11.23 q34.11 107574 ChimerSeq ChiTaRs ChiTaRs HIST2H2BE-PFDN6 HIST2H2BE chr1 149858232 PFDN6 chr6 4489620 Exonic hg19 NA BP246346 5'UTR-5'UTR Inter-chr q21.2 107575 ChimerSeq ChiTaRs ChiTaRs GTPBP4-NIN GTPBP4 chr10 1058553 NIN chr14 51226637 Exonic hg19 NA AW361086 Out-of-frame Inter-chr p15.3 Tumor suppressor gene q22.1 Oncogene 107576 ChimerSeq ChiTaRs ChiTaRs COL3A1-YWHAB COL3A1 chr2 189876781 YWHAB chr20 43514415 Exonic hg19 NA BM975208 Out-of-frame Inter-chr q32.2 q13.12 107577 ChimerSeq ChiTaRs ChiTaRs CLSTN1-TLR7 CLSTN1 chr1 9851604 TLR7 chrX 12906819 Exonic hg19 NA CB047121 Out-of-frame Inter-chr p36.22 p22.2 107578 ChimerSeq ChiTaRs ChiTaRs CPSF1-KRT6A CPSF1 chr8 145618938 KRT6A chr12 52881217 Exonic hg19 NA BI016625 Out-of-frame Inter-chr q24.3 q13.13 107579 ChimerSeq ChiTaRs ChiTaRs GFM2-SPAG6 GFM2 chr5 74062864 SPAG6 chr10 22699957 Exonic hg19 NA CN357114 Out-of-frame Inter-chr q13.3 p12.2 107580 ChimerSeq ChiTaRs ChiTaRs NFXL1-GNB2L1 NFXL1 chr4 47916633 GNB2L1 chr5 180663956 Exonic hg19 NA AK131311 5'UTR-3'UTR Inter-chr p12 Transcription factor Tumor suppressor gene 107581 ChimerSeq ChiTaRs ChiTaRs CASC2-RNF180 CASC2 chr10 119967332 RNF180 chr5 63510056 Exonic hg19 NA BM680777 Out-of-frame Inter-chr q26.11 Tumor suppressor gene q12.3 Tumor suppressor gene 107582 ChimerSeq ChiTaRs ChiTaRs ZNF655-NUDCD3 ZNF655 chr7 99158320 NUDCD3 chr7 44423191 Exonic hg19 NA AK127163 Out-of-frame Intra-chr q22.1 Transcription factor p13 KB 107583 ChimerSeq ChiTaRs ChiTaRs SNX12-RMND5B SNX12 chrX 70288184 RMND5B chr5 177565175 Exonic hg19 NA BP274873 Out-of-frame Inter-chr q13.1 q35.3 107584 ChimerSeq ChiTaRs ChiTaRs FAM115A-BAIAP2L1 FAM115A chr7 143550229 BAIAP2L1 chr7 97937528 Exonic hg19 NA BQ477426 Out-of-frame Intra-chr q22.1 107585 ChimerSeq ChiTaRs ChiTaRs PPAPDC1A-CXCR1 PPAPDC1A chr10 122319850 CXCR1 chr2 219027568 Exonic hg19 NA BF905441 Out-of-frame Inter-chr q35 107586 ChimerSeq ChiTaRs ChiTaRs CDK16-CILP CDK16 chrX 47088019 CILP chr15 65490126 Exonic hg19 NA BF768984 Out-of-frame Inter-chr p11.3 q22.31 107587 ChimerSeq ChiTaRs ChiTaRs RPS23-RPS24 RPS23 chr5 81574155 RPS24 chr10 79799960 Exonic hg19 NA AI908980 Out-of-frame Inter-chr q14.2 q22.3 107588 ChimerSeq ChiTaRs ChiTaRs SATB2-PIK3C2B SATB2 chr2 200173657 PIK3C2B chr1 204393709 Exonic hg19 NA BF363056 Out-of-frame Inter-chr q33.1 Transcription factor q32.1 Oncogene 107589 ChimerSeq ChiTaRs ChiTaRs CRTAP-RTCB CRTAP chr3 33161972 RTCB chr22 32795718 Exonic hg19 NA DB024370 Out-of-frame Inter-chr p22.3 q12.3 107590 ChimerSeq ChiTaRs ChiTaRs MDC1-H19 MDC1 chr6 2000697 H19 chr11 2018780 Exonic hg19 NA AA460447 Out-of-frame Inter-chr Tumor suppressor gene p15.5 Tumor suppressor gene 107591 ChimerSeq ChiTaRs ChiTaRs CFH-COL12A1 CFH chr1 196654356 COL12A1 chr6 75794449 Exonic hg19 NA AW371066 Out-of-frame Inter-chr q31.3 q14.1 107592 ChimerSeq ChiTaRs ChiTaRs PLEKHA6-PELI3 PLEKHA6 chr1 204191706 PELI3 chr11 66244217 Exonic hg19 NA BI033034 Out-of-frame Inter-chr q32.1 q13.2 107593 ChimerSeq ChiTaRs ChiTaRs PRG2-LOC100507412 PRG2 chr11 57158120 LOC100507412 chr? 109594 Exonic hg19 NA BP320144 Out-of-frame Inter-chr q12.1 107594 ChimerSeq ChiTaRs ChiTaRs PCMTD1-MSN PCMTD1 chr8 52762444 MSN chrX 64887536 Exonic hg19 NA BQ331576 Out-of-frame Inter-chr q11.23 q12 107595 ChimerSeq ChiTaRs ChiTaRs MXD4-PSMC4 MXD4 chr4 2263498 PSMC4 chr19 40485976 Exonic hg19 NA BP432759 Out-of-frame Inter-chr p16.3 Transcription factor 107596 ChimerSeq ChiTaRs ChiTaRs STX5-DZIP1 STX5 chr11 62591747 DZIP1 chr13 96283045 Exonic hg19 NA BF083373 Out-of-frame Inter-chr q12.3 q32.1 Transcription factor 107597 ChimerSeq ChiTaRs ChiTaRs BCLAF1-LOC440354 BCLAF1 chr6 136610927 LOC440354 chr16 29506751 Exonic hg19 NA DW430831 Out-of-frame Inter-chr q23.3 107598 ChimerSeq ChiTaRs ChiTaRs FABP2-MBOAT2 FABP2 chr4 120243273 MBOAT2 chr2 9003275 Exonic hg19 NA BP270882 Out-of-frame Inter-chr q26 p25.1 107599 ChimerSeq ChiTaRs ChiTaRs NBPF14-NPHP3-ACAD11 NBPF14 chr1 145209266 NPHP3-ACAD11 chr3 132395582 Exonic hg19 NA BM727451 Out-of-frame Inter-chr q21.2 q22.1 107600 ChimerSeq ChiTaRs ChiTaRs MLLT10-PICALM MLLT10 chr10 21827842 PICALM chr11 85670030 Exonic hg19 NA AF060930 Out-of-frame Inter-chr p12.31 Oncogene q14.2 KB Pub Seq+ 107601 ChimerSeq ChiTaRs ChiTaRs NCL-WDR26 NCL chr2 232326351 WDR26 chr1 224621386 Exonic hg19 NA BE697397 Out-of-frame Inter-chr q37.1 q42.12 107602 ChimerSeq ChiTaRs ChiTaRs FKBP15-MALAT1 FKBP15 chr9 115945150 MALAT1 chr11 65267421 Exonic hg19 NA AW361053 Out-of-frame Inter-chr q32 q13.1 107603 ChimerSeq ChiTaRs ChiTaRs STX5-DZIP1 STX5 chr11 62591741 DZIP1 chr13 96283045 Exonic hg19 NA BF083368 Out-of-frame Inter-chr q12.3 q32.1 Transcription factor 107604 ChimerSeq ChiTaRs ChiTaRs ZNF280C-ZNF331 ZNF280C chrX 129402867 ZNF331 chr19 54079990 Exonic hg19 NA BU176890 Out-of-frame Inter-chr q26.1 Transcription factor q13.42 Transcription factor 107605 ChimerSeq ChiTaRs ChiTaRs RGPD5-ACACA RGPD5 chr2 113146827 ACACA chr17 35591930 Exonic hg19 NA BF910869 Out-of-frame Inter-chr q13 107606 ChimerSeq ChiTaRs ChiTaRs LIPA-CCDC90B LIPA chr10 90982330 CCDC90B chr11 82996932 Exonic hg19 NA BP304339 Out-of-frame Inter-chr q23.31 q14.1 107607 ChimerSeq ChiTaRs ChiTaRs HBP1-JAZF1 HBP1 chr7 106842272 JAZF1 chr7 28187691 Exonic hg19 NA AI365660 Out-of-frame Intra-chr Tumor suppressor gene Transcription factor p15.1 Transcription factor 107608 ChimerSeq ChiTaRs ChiTaRs DYNC1LI1-ZRANB3 DYNC1LI1 chr3 32612308 ZRANB3 chr2 135985454 Exonic hg19 NA BM543161 Out-of-frame Inter-chr p22.3 q21.3 107609 ChimerSeq ChiTaRs ChiTaRs IMP4-SLCO3A1 IMP4 chr2 131103665 SLCO3A1 chr15 92706284 Exonic hg19 NA EB387322 Out-of-frame Inter-chr q21.1 q26.1 107610 ChimerSeq ChiTaRs ChiTaRs PDCL-ADH5 PDCL chr9 125590812 ADH5 chr4 99993220 Exonic hg19 NA CN258364 Out-of-frame Inter-chr q33.2 q23 107611 ChimerSeq ChiTaRs ChiTaRs NUCKS1-CCDC97 NUCKS1 chr1 205719262 CCDC97 chr19 41829181 Exonic hg19 NA BE561339 Out-of-frame Inter-chr q32.1 q13.2 107612 ChimerSeq ChiTaRs ChiTaRs EEF1A1-PRH1-PRR4 EEF1A1 chr6 74230755 PRH1-PRR4 chr12 11033578 Exonic hg19 NA CB955682 Out-of-frame Inter-chr q13 Tumor suppressor gene 107613 ChimerSeq ChiTaRs ChiTaRs LOC100506548-FCGR3A LOC100506548 chr5 40826534 FCGR3A chr1 161512542 Exonic hg19 NA AW137121 Out-of-frame Inter-chr q23.3 107614 ChimerSeq ChiTaRs ChiTaRs COL1A2-SACS COL1A2 chr7 94057637 SACS chr13 23903130 Exonic hg19 NA AA417817 Out-of-frame Inter-chr q21.3 q12.12 107615 ChimerSeq ChiTaRs ChiTaRs CANX-MLIP CANX chr5 179156344 MLIP chr6 53986265 Exonic hg19 NA N44604 Out-of-frame Inter-chr p12.1 107616 ChimerSeq ChiTaRs ChiTaRs MICB-RPL3 MICB chr6 2596137 RPL3 chr22 39710691 Exonic hg19 NA CV360980 Out-of-frame Inter-chr q13.1 107617 ChimerSeq ChiTaRs ChiTaRs CD47-IGFBP3 CD47 chr3 107777279 IGFBP3 chr7 45953172 Exonic hg19 NA AI167998 Out-of-frame Inter-chr q13.12 p12.3 Tumor suppressor gene 107618 ChimerSeq ChiTaRs ChiTaRs MICAL2-VMP1 MICAL2 chr11 12241102 VMP1 chr17 57916044 Exonic hg19 NA AA601529 Out-of-frame Inter-chr p15.3 q23.1 107619 ChimerSeq ChiTaRs ChiTaRs EEF1A1-RPL41 EEF1A1 chr6 74229781 RPL41 chr12 56510527 Exonic hg19 NA AA316930 Out-of-frame Inter-chr q13 Tumor suppressor gene q13.2 107620 ChimerSeq ChiTaRs ChiTaRs TERF1-MLEC TERF1 chr8 73958665 MLEC chr12 121135317 Exonic hg19 NA AI632281 Out-of-frame Inter-chr q21.11 Transcription factor q24.31 107621 ChimerSeq ChiTaRs ChiTaRs RAB11FIP2-HMGXB4 RAB11FIP2 chr10 119774621 HMGXB4 chr22 35683366 Exonic hg19 NA BM979584 Out-of-frame Inter-chr q26.11 q12.3 107622 ChimerSeq ChiTaRs ChiTaRs ERCC3-AAMP ERCC3 chr2 128016897 AAMP chr2 219128852 Exonic hg19 NA BI859150 Out-of-frame Intra-chr q14.3 Oncogene q35 107623 ChimerSeq ChiTaRs ChiTaRs RAMP1-GANAB RAMP1 chr2 238786006 GANAB chr11 62392904 Exonic hg19 NA AK295899 Out-of-frame Inter-chr q37.3 q12.3 Tumor suppressor gene 107624 ChimerSeq ChiTaRs ChiTaRs PAPPA-PSG3 PAPPA chr9 118916383 PSG3 chr19 43233959 Exonic hg19 NA DA840844 Out-of-frame Inter-chr q33.1 q13.2 107625 ChimerSeq ChiTaRs ChiTaRs TMEM50A-TMEM50A TMEM50A chr1 25688814 TMEM50A chr1 25688785 Exonic hg19 NA C75391 Out-of-frame Intra-chr p36.11 p36.11 107626 ChimerSeq ChiTaRs ChiTaRs SMC3-FN1 SMC3 chr10 112328772 FN1 chr2 216226178 Exonic hg19 NA CN391691 Out-of-frame Inter-chr q25.2 q35 Oncogene 107627 ChimerSeq ChiTaRs ChiTaRs LDHA-WIPI2 LDHA chr11 18427106 WIPI2 chr7 5262235 Exonic hg19 NA BM044090 Out-of-frame Inter-chr p15.1 p22.1 107628 ChimerSeq ChiTaRs ChiTaRs EGR1-ARL6IP4 EGR1 chr5 137803524 ARL6IP4 chr12 123467386 Exonic hg19 NA AU185680 Out-of-frame Inter-chr q31.2 Tumor suppressor gene Transcription factor q24.31 107629 ChimerSeq ChiTaRs ChiTaRs RPS12-NIPAL3 RPS12 chr6 133138703 NIPAL3 chr1 24745780 Exonic hg19 NA AI394068 3'UTR-5'UTR Inter-chr q23.2 p36.11 107630 ChimerSeq ChiTaRs ChiTaRs VPS26A-ATAD1 VPS26A chr10 70916890 ATAD1 chr10 89513183 Exonic hg19 NA DA031295 Out-of-frame Intra-chr q22.1 107631 ChimerSeq ChiTaRs ChiTaRs HBB-LRRC2 HBB chr11 5248285 LRRC2 chr3 46558688 Exonic hg19 NA AJ710574 Out-of-frame Inter-chr p15.4 p21.31 107632 ChimerSeq ChiTaRs ChiTaRs EML4-PPAPDC3 EML4 chr2 42488406 PPAPDC3 chr9 134170342 Exonic hg19 NA BE885277 Out-of-frame Inter-chr p21 Oncogene 107633 ChimerSeq ChiTaRs ChiTaRs MED28-GINS2 MED28 chr4 17625565 GINS2 chr16 85711899 Exonic hg19 NA BE907417 Out-of-frame Inter-chr p15.32 q24.1 107634 ChimerSeq ChiTaRs ChiTaRs AZGP1-CAPRIN2 AZGP1 chr7 99573643 CAPRIN2 chr12 30862836 Exonic hg19 NA AX795406 Out-of-frame Inter-chr q22.1 Tumor suppressor gene p11.21 107635 ChimerSeq ChiTaRs ChiTaRs KCNJ10-DCTN1 KCNJ10 chr1 160039928 DCTN1 chr2 74594841 Exonic hg19 NA DA064572 Out-of-frame Inter-chr q23.2 p13.1 107636 ChimerSeq ChiTaRs ChiTaRs ATPAF1-PLIN3 ATPAF1 chr1 47133958 PLIN3 chr19 4847764 Exonic hg19 NA CN418162 Out-of-frame Inter-chr p33 p13.3 107637 ChimerSeq ChiTaRs ChiTaRs MAL2-LEPRE1 MAL2 chr8 120255727 LEPRE1 chr1 43212045 Exonic hg19 NA BC051324 Out-of-frame Inter-chr q24.12 107638 ChimerSeq ChiTaRs ChiTaRs FAM168B-NDST1 FAM168B chr2 131810549 NDST1 chr5 149937242 Exonic hg19 NA BU631743 Out-of-frame Inter-chr q21.1 q33.1 107639 ChimerSeq ChiTaRs ChiTaRs HEXB-SSRP1 HEXB chr5 74017113 SSRP1 chr11 57095812 Exonic hg19 NA AA253363 3'UTR-CDS Inter-chr q13.3 q12.1 107640 ChimerSeq ChiTaRs ChiTaRs RPL37A-CBX6 RPL37A chr2 217366190 CBX6 chr22 39262273 Exonic hg19 NA AW246883 Out-of-frame Inter-chr q35 q13.1 107641 ChimerSeq ChiTaRs ChiTaRs GAK-BPTF GAK chr4 926115 BPTF chr17 65940363 Exonic hg19 NA AK309413 Out-of-frame Inter-chr p16.3 Other:NAK q24.2 Transcription factor 107642 ChimerSeq ChiTaRs ChiTaRs NEUROD6-PRKACB NEUROD6 chr7 31380346 PRKACB chr1 84644858 Exonic hg19 NA DA775505 Out-of-frame Inter-chr p14.3 Transcription factor p31.1 107643 ChimerSeq ChiTaRs ChiTaRs USP6NL-GRB2 USP6NL chr10 11503662 GRB2 chr17 73401569 Exonic hg19 NA BM748827 3'UTR-5'UTR Inter-chr p14 q25.1 107644 ChimerSeq ChiTaRs ChiTaRs PPP3CB-RPLP0 PPP3CB chr10 75239128 RPLP0 chr12 120634509 Exonic hg19 NA BG180012 Out-of-frame Inter-chr q22.2 q24.23 107645 ChimerSeq ChiTaRs ChiTaRs ZNF736-RTN3 ZNF736 chr7 63797360 RTN3 chr11 63517460 Exonic hg19 NA DA795976 Out-of-frame Inter-chr q11.21 Transcription factor q13.1 107646 ChimerSeq ChiTaRs ChiTaRs TMEM223-PDHA1 TMEM223 chr11 62559470 PDHA1 chrX 19372607 Exonic hg19 NA AM746210 Out-of-frame Inter-chr q12.3 p22.12 107647 ChimerSeq ChiTaRs ChiTaRs DDB1-MALAT1 DDB1 chr11 61071452 MALAT1 chr11 65272046 Exonic hg19 NA BF995091 Out-of-frame Intra-chr q12.2 q13.1 107648 ChimerSeq ChiTaRs ChiTaRs ZNF391-IQCG ZNF391 chr6 27358698 IQCG chr3 197680924 Exonic hg19 NA AX747641 Out-of-frame Inter-chr p22.1 Transcription factor q29 107649 ChimerSeq ChiTaRs ChiTaRs GIMAP1-PTPRM GIMAP1 chr7 150417609 PTPRM chr18 8406398 Exonic hg19 NA BG484375 Out-of-frame Inter-chr q36.1 p11.23 107650 ChimerSeq ChiTaRs ChiTaRs SNIP1-C11orf58 SNIP1 chr1 38011084 C11orf58 chr11 16760206 Exonic hg19 NA EL952482 Out-of-frame Inter-chr p34.3 p15.2 107651 ChimerSeq ChiTaRs ChiTaRs ERGIC1-ERGIC1 ERGIC1 chr5 172378527 ERGIC1 chr5 172378692 Exonic hg19 NA AW798048 Out-of-frame Intra-chr q35.1 q35.1 107652 ChimerSeq ChiTaRs ChiTaRs TSIX-DECR2 TSIX chrX 73047343 DECR2 chr16 462329 Exonic hg19 NA BF095515 Out-of-frame Inter-chr q13.2 107653 ChimerSeq ChiTaRs ChiTaRs HNRNPD-VAMP2 HNRNPD chr4 83275258 VAMP2 chr17 8063452 Exonic hg19 NA BE646088 Out-of-frame Inter-chr q21.22 p13.1 107654 ChimerSeq ChiTaRs ChiTaRs ADIPOR1-APEH ADIPOR1 chr1 202920281 APEH chr3 49712711 Exonic hg19 NA BF988871 Out-of-frame Inter-chr q32.1 p21.31 107655 ChimerSeq ChiTaRs ChiTaRs HTN3-RPL6 HTN3 chr4 70902213 RPL6 chr12 112843030 Exonic hg19 NA BP333196 Out-of-frame Inter-chr q24.13 107656 ChimerSeq ChiTaRs ChiTaRs H2AFY2-NDE1 H2AFY2 chr10 71855484 NDE1 chr16 15797671 Exonic hg19 NA BI046349 Out-of-frame Inter-chr q22.1 p13.11 107657 ChimerSeq ChiTaRs ChiTaRs RPL31-MYLK-AS1 RPL31 chr2 101619203 MYLK-AS1 chr3 123331337 Exonic hg19 NA DB263110 Out-of-frame Inter-chr q11.2 q21.1 107658 ChimerSeq ChiTaRs ChiTaRs HMCES-DLGAP4 HMCES chr3 128998597 DLGAP4 chr20 35090183 Exonic hg19 NA AK000595 Out-of-frame Inter-chr q21.3 q11.23 107659 ChimerSeq ChiTaRs ChiTaRs SORBS2-PLAGL1 SORBS2 chr4 186697033 PLAGL1 chr6 144263629 Exonic hg19 NA DA013158 Out-of-frame Inter-chr q35.1 q24.2 Tumor suppressor gene Transcription factor 107660 ChimerSeq ChiTaRs ChiTaRs FADS1-CLDN1 FADS1 chr11 61569290 CLDN1 chr3 190024204 Exonic hg19 NA BG289620 Out-of-frame Inter-chr q12.2 q28 Tumor suppressor gene 107661 ChimerSeq ChiTaRs ChiTaRs MSC-SORBS1 MSC chr8 72753862 SORBS1 chr10 97073481 Exonic hg19 NA AA258404 Out-of-frame Inter-chr q13.3 Transcription factor q24.1 107662 ChimerSeq ChiTaRs ChiTaRs NIPAL3-B4GALT5 NIPAL3 chr1 24797788 B4GALT5 chr20 48250693 Exonic hg19 NA BG766572 Out-of-frame Inter-chr p36.11 q13.13 107663 ChimerSeq ChiTaRs ChiTaRs AVL9-TPM4 AVL9 chr7 33046540 TPM4 chr19 16212792 Exonic hg19 NA BU623993 Out-of-frame Inter-chr p14.3 p13.12 107664 ChimerSeq ChiTaRs ChiTaRs ARPC1A-SMARCC1 ARPC1A chr7 98972405 SMARCC1 chr3 47755904 Exonic hg19 NA DA679994 3'UTR-CDS Inter-chr q22.1 p21.31 Tumor suppressor gene 107665 ChimerSeq ChiTaRs ChiTaRs NDST2-STAT3 NDST2 chr10 75561973 STAT3 chr17 40489788 Exonic hg19 NA T05579 Out-of-frame Inter-chr q22.2 q21.2 Oncogene Tumor suppressor gene Transcription factor 107666 ChimerSeq ChiTaRs ChiTaRs YWHAQ-AKIRIN1 YWHAQ chr2 9724897 AKIRIN1 chr1 39457154 Exonic hg19 NA CA411585 Out-of-frame Inter-chr p25.1 p34.3 107667 ChimerSeq ChiTaRs ChiTaRs VCP-KIAA0753 VCP chr9 35057426 KIAA0753 chr17 6493134 Exonic hg19 NA DA730565 Out-of-frame Inter-chr p13.3 p13.1 107668 ChimerSeq ChiTaRs ChiTaRs ALG6-GNAS ALG6 chr1 63868001 GNAS chr20 57486111 Exonic hg19 NA BP430141 Out-of-frame Inter-chr p31.3 q13.32 Oncogene 107669 ChimerSeq ChiTaRs ChiTaRs SLC43A3-FAM127A SLC43A3 chr11 57193127 FAM127A chrX 134167079 Exonic hg19 NA BF829589 Out-of-frame Inter-chr q12.1 107670 ChimerSeq ChiTaRs ChiTaRs IGF2BP2-IGF2BP2 IGF2BP2 chr3 185445274 IGF2BP2 chr3 185445222 Exonic hg19 NA BX100154 Out-of-frame Intra-chr q27.2 q27.2 107671 ChimerSeq ChiTaRs ChiTaRs MYOT-MALAT1 MYOT chr5 137206333 MALAT1 chr11 65269558 Exonic hg19 NA BF672440 Out-of-frame Inter-chr q31.2 q13.1 107672 ChimerSeq ChiTaRs ChiTaRs UCHL1-USP22 UCHL1 chr4 41270155 USP22 chr17 20902909 Exonic hg19 NA BG028938 Out-of-frame Inter-chr p13 Tumor suppressor gene p11.2 107673 ChimerSeq ChiTaRs ChiTaRs TRRAP-FBLIM1 TRRAP chr7 98586536 FBLIM1 chr1 16111084 Exonic hg19 NA BQ364082 Out-of-frame Inter-chr q22.1 Atypical:PIKK Oncogene p36.21 107674 ChimerSeq ChiTaRs ChiTaRs ANP32B-GTPBP4 ANP32B chr9 100773593 GTPBP4 chr10 1063014 Exonic hg19 NA BG696756 In-Frame Inter-chr q22.33 p15.3 Tumor suppressor gene 107675 ChimerSeq ChiTaRs ChiTaRs C1orf198-PROSAPIP1 C1orf198 chr1 231004157 PROSAPIP1 chr20 3143276 Exonic hg19 NA CN303383 Out-of-frame Inter-chr q42.2 107676 ChimerSeq ChiTaRs ChiTaRs F11-ANKH F11 chr4 187208898 ANKH chr5 14711173 Exonic hg19 NA AW951415 Out-of-frame Inter-chr q35.2 p15.2 107677 ChimerSeq ChiTaRs ChiTaRs MFSD10-PDXDC1 MFSD10 chr4 2935719 PDXDC1 chr16 15127153 Exonic hg19 NA BP417084 Out-of-frame Inter-chr p16.3 p13.11 107678 ChimerSeq ChiTaRs ChiTaRs MLLT4-TMEM151B MLLT4 chr6 168365716 TMEM151B chr6 44246512 Exonic hg19 NA BX101569 Out-of-frame Intra-chr p21.1 107679 ChimerSeq ChiTaRs ChiTaRs HERC3-STRAP HERC3 chr4 89618979 STRAP chr12 16035532 Exonic hg19 NA DA065415 Out-of-frame Inter-chr q22.1 p12.3 107680 ChimerSeq ChiTaRs ChiTaRs MIR548H3-NUP93 MIR548H3 chr6 97708477 NUP93 chr16 56839451 Exonic hg19 NA AU124982 Out-of-frame Inter-chr p12 q13 107681 ChimerSeq ChiTaRs ChiTaRs WDR74-ZNF143 WDR74 chr11 62609281 ZNF143 chr11 9482558 Exonic hg19 NA DA747329 Out-of-frame Intra-chr q12.3 p15.4 Transcription factor 107682 ChimerSeq ChiTaRs ChiTaRs MRPS18C-SIGLEC10 MRPS18C chr4 84382386 SIGLEC10 chr19 51913736 Exonic hg19 NA BX363877 Out-of-frame Inter-chr q21.23 q13.41 107683 ChimerSeq ChiTaRs ChiTaRs CD74-LOC100507412 CD74 chr5 149792319 LOC100507412 chr? 109839 Exonic hg19 NA BP200331 Out-of-frame Inter-chr q33.1 107684 ChimerSeq ChiTaRs ChiTaRs NAA50-STATH NAA50 chr3 113440583 STATH chr4 70866587 Exonic hg19 NA CD000349 Out-of-frame Inter-chr q13.31 107685 ChimerSeq ChiTaRs ChiTaRs SRI-EMG1 SRI chr7 87840235 EMG1 chr12 7092592 Exonic hg19 NA AU124815 Out-of-frame Inter-chr q21.12 p13.31 107686 ChimerSeq ChiTaRs ChiTaRs MAN1A2-MAN1A2 MAN1A2 chr1 117945011 MAN1A2 chr1 117957327 Exonic hg19 NA AA668350 Out-of-frame Intra-chr p12 p12 107687 ChimerSeq ChiTaRs ChiTaRs FGB-GNAS FGB chr4 155490429 GNAS chr20 57485039 Exonic hg19 NA BC020762 Out-of-frame Inter-chr q31.3 q13.32 Oncogene 107688 ChimerSeq ChiTaRs ChiTaRs ZFAT-LOC148413 ZFAT chr8 135613896 LOC148413 chr1 1337289 Exonic hg19 NA BI091105 Out-of-frame Inter-chr q24.22 Transcription factor 107689 ChimerSeq ChiTaRs ChiTaRs HLA-A-IGBP1 HLA-A chr6 1424100 IGBP1 chrX 69354482 Exonic hg19 NA BG315205 Out-of-frame Inter-chr p22.1 q13.1 107690 ChimerSeq ChiTaRs ChiTaRs CACNA1E-RPL30 CACNA1E chr1 181611747 RPL30 chr8 99053949 Exonic hg19 NA CD389544 Out-of-frame Inter-chr q25.3 q22.2 107691 ChimerSeq ChiTaRs ChiTaRs YY1AP1-MRPL51 YY1AP1 chr1 155630224 MRPL51 chr12 6601319 Exonic hg19 NA DB519674 Out-of-frame Inter-chr q22 p13.31 107692 ChimerSeq ChiTaRs ChiTaRs NHSL1-FTL NHSL1 chr6 138820631 FTL chr19 49468566 Exonic hg19 NA AX747703 Out-of-frame Inter-chr q24.1 q13.33 107693 ChimerSeq ChiTaRs ChiTaRs SMC1A-XIAP SMC1A chrX 53449585 XIAP chrX 123045233 Exonic hg19 NA BC046147 Out-of-frame Intra-chr p11.22 q25 107694 ChimerSeq ChiTaRs ChiTaRs FGR-EFCAB2 FGR chr1 27953078 EFCAB2 chr1 245250923 Exonic hg19 NA BC002836 Out-of-frame Intra-chr p35.3 TK:Src q44 107695 ChimerSeq ChiTaRs ChiTaRs RPL31-NCEH1 RPL31 chr2 101619199 NCEH1 chr3 172348445 Exonic hg19 NA BU602013 Out-of-frame Inter-chr q11.2 q26.31 107696 ChimerSeq ChiTaRs ChiTaRs RPS12-PAK4 RPS12 chr6 133138698 PAK4 chr19 39669994 Exonic hg19 NA CD050400 Out-of-frame Inter-chr q23.2 q13.2 STE:STE20 107697 ChimerSeq ChiTaRs ChiTaRs CCNJL-PLAT CCNJL chr5 159686683 PLAT chr8 42033175 Exonic hg19 NA BF765951 Out-of-frame Inter-chr q33.3 p11.21 107698 ChimerSeq ChiTaRs ChiTaRs TSPAN18-TMEM151B TSPAN18 chr11 44951660 TMEM151B chr6 44244608 Exonic hg19 NA DA788574 Out-of-frame Inter-chr p11.2 p21.1 107699 ChimerSeq ChiTaRs ChiTaRs RPS24-PMPCB RPS24 chr10 79797006 PMPCB chr7 102963027 Exonic hg19 NA AW838568 Out-of-frame Inter-chr q22.3 q22.1 107700 ChimerSeq ChiTaRs ChiTaRs ZBTB7B-STOM ZBTB7B chr1 154990999 STOM chr9 124101433 Exonic hg19 NA CA440911 Out-of-frame Inter-chr q21.3 Transcription factor q33.2 107701 ChimerSeq ChiTaRs ChiTaRs ATF6B-GNG4 ATF6B chr6 3468095 GNG4 chr1 235714207 Exonic hg19 NA AV747616 Out-of-frame Inter-chr Transcription factor 107702 ChimerSeq ChiTaRs ChiTaRs ZNF718-LMO7 ZNF718 chr4 127011 LMO7 chr13 76195897 Exonic hg19 NA DB237035 Out-of-frame Inter-chr p16.3 Transcription factor q22.2 107703 ChimerSeq ChiTaRs ChiTaRs ATP6V0E1-EIF5B ATP6V0E1 chr5 172461895 EIF5B chr2 100003799 Exonic hg19 NA AI065143 Out-of-frame Inter-chr q35.1 q11.2 107704 ChimerSeq ChiTaRs ChiTaRs AIFM2-GAS7 AIFM2 chr10 71873495 GAS7 chr17 9817154 Exonic hg19 NA AV704263 Out-of-frame Inter-chr q22.1 p13.1 107705 ChimerSeq ChiTaRs ChiTaRs C9orf91-C14orf37 C9orf91 chr9 117408702 C14orf37 chr14 58739720 Exonic hg19 NA AW665013 Out-of-frame Inter-chr q23.1 107706 ChimerSeq ChiTaRs ChiTaRs GALNT7-COL1A2 GALNT7 chr4 174137360 COL1A2 chr7 94043007 Exonic hg19 NA BQ004985 Out-of-frame Inter-chr q34.1 q21.3 107707 ChimerSeq ChiTaRs ChiTaRs USP11-SAV1 USP11 chrX 47107501 SAV1 chr14 51102019 Exonic hg19 NA N29021 Out-of-frame Inter-chr p11.3 q22.1 107708 ChimerSeq ChiTaRs ChiTaRs PRDX1-TNFAIP3 PRDX1 chr1 45976963 TNFAIP3 chr6 138203259 Exonic hg19 NA CD742959 Out-of-frame Inter-chr p34.1 q23.3 Oncogene Tumor suppressor gene 107709 ChimerSeq ChiTaRs ChiTaRs FAM120AOS-PLEC FAM120AOS chr9 96209575 PLEC chr8 144995531 Exonic hg19 NA AW753268 Out-of-frame Inter-chr q22.31 q24.3 107710 ChimerSeq ChiTaRs ChiTaRs MECOM-SHISA5 MECOM chr3 168909667 SHISA5 chr3 48509290 Exonic hg19 NA CD722129 Out-of-frame Intra-chr q26.2 Transcription factor p21.31 107711 ChimerSeq ChiTaRs ChiTaRs CTRC-GABBR1 CTRC chr1 15769008 GABBR1 chr6 873338 Exonic hg19 NA BI835315 Out-of-frame Inter-chr p36.21 107712 ChimerSeq ChiTaRs ChiTaRs AGAP3-TP53I11 AGAP3 chr7 150841521 TP53I11 chr11 44955856 Exonic hg19 NA BM991733 Out-of-frame Inter-chr q36.1 p11.2 107713 ChimerSeq ChiTaRs ChiTaRs TG-SDHAF1 TG chr8 133953700 SDHAF1 chr19 36486834 Exonic hg19 NA BI002383 Out-of-frame Inter-chr q24.22 q13.12 107714 ChimerSeq ChiTaRs ChiTaRs ENY2-UPF2 ENY2 chr8 110352793 UPF2 chr10 12077064 Exonic hg19 NA BU570216 Out-of-frame Inter-chr q23.1 p14 107715 ChimerSeq ChiTaRs ChiTaRs KCNMA1-FAM134C KCNMA1 chr10 79110505 FAM134C chr17 40739852 Exonic hg19 NA DB096973 Out-of-frame Inter-chr q22.3 107716 ChimerSeq ChiTaRs ChiTaRs WDR74-INTS7 WDR74 chr11 62609281 INTS7 chr1 212194425 Exonic hg19 NA DA802886 Out-of-frame Inter-chr q12.3 q32.3 107717 ChimerSeq ChiTaRs ChiTaRs PPP2R2B-PLCH2 PPP2R2B chr5 146080422 PLCH2 chr1 2418396 Exonic hg19 NA BG946330 Out-of-frame Inter-chr q32 p36.32 107718 ChimerSeq ChiTaRs ChiTaRs EIF3A-CSF1R EIF3A chr10 120810165 CSF1R chr5 149474470 Exonic hg19 NA BC014625 Out-of-frame Inter-chr q26.11 q32 Oncogene 107719 ChimerSeq ChiTaRs ChiTaRs MAGED1-LUC7L MAGED1 chrX 51640721 LUC7L chr16 313297 Exonic hg19 NA BE904219 Out-of-frame Inter-chr p11.22 p13.3 107720 ChimerSeq ChiTaRs ChiTaRs CD74-BPIFA2 CD74 chr5 149781965 BPIFA2 chr20 31769130 Exonic hg19 NA CB986308 Out-of-frame Inter-chr q33.1 q11.21 107721 ChimerSeq ChiTaRs ChiTaRs EPB41L4B-UBE2R2 EPB41L4B chr9 111936648 UBE2R2 chr9 33912066 Exonic hg19 NA BF362357 Out-of-frame Intra-chr q31.3 p13.3 107722 ChimerSeq ChiTaRs ChiTaRs SAR1A-TMEM48 SAR1A chr10 71910118 TMEM48 chr1 54269610 Exonic hg19 NA AI239866 Out-of-frame Inter-chr q22.1 107723 ChimerSeq ChiTaRs ChiTaRs PIGR-GIF PIGR chr1 207105925 GIF chr11 59596748 Exonic hg19 NA M63154 Out-of-frame Inter-chr q32.1 q12.1 107724 ChimerSeq ChiTaRs ChiTaRs NEURL1B-MYD88 NEURL1B chr5 172083661 MYD88 chr3 38182906 Exonic hg19 NA CD367978 Out-of-frame Inter-chr q35.1 p22.2 Oncogene 107725 ChimerSeq ChiTaRs ChiTaRs JAK1-ATF3 JAK1 chr1 65352018 ATF3 chr1 212791479 Exonic hg19 NA BE719597 Out-of-frame Intra-chr p31.3 TK:JakA Oncogene q32.3 Tumor suppressor gene Transcription factor 107726 ChimerSeq ChiTaRs ChiTaRs HLA-E-GTPBP1 HLA-E chr6 1793088 GTPBP1 chr22 39128958 Exonic hg19 NA BG925618 Out-of-frame Inter-chr q13.1 107727 ChimerSeq ChiTaRs ChiTaRs SLC19A2-THAP7-AS1 SLC19A2 chr1 169441520 THAP7-AS1 chr22 21356834 Exonic hg19 NA H59323 Out-of-frame Inter-chr q24.2 q11.21 Transcription factor 107728 ChimerSeq ChiTaRs ChiTaRs TOMM70A-STMN2 TOMM70A chr3 100083893 STMN2 chr8 80577185 Exonic hg19 NA BP423639 Out-of-frame Inter-chr q21.13 107729 ChimerSeq ChiTaRs ChiTaRs ATF3-SNX1 ATF3 chr1 212791575 SNX1 chr15 64426920 Exonic hg19 NA AW998144 Out-of-frame Inter-chr q32.3 Tumor suppressor gene Transcription factor q22.31 107730 ChimerSeq ChiTaRs ChiTaRs FAM129B-EIF3H FAM129B chr9 130279301 EIF3H chr8 117668154 Exonic hg19 NA BE090337 Out-of-frame Inter-chr q34.11 q24.11 107731 ChimerSeq ChiTaRs ChiTaRs LOC100130331-GNAS LOC100130331 chr1 238090399 GNAS chr20 57485858 Exonic hg19 NA BU159042 Out-of-frame Inter-chr q13.32 Oncogene 107732 ChimerSeq ChiTaRs ChiTaRs ZMYND11-ZFAND4 ZMYND11 chr10 226068 ZFAND4 chr10 46111046 Exonic hg19 NA BC036186 CDS-3'UTR Intra-chr p15.3 Tumor suppressor gene q11.22 KB 107733 ChimerSeq ChiTaRs ChiTaRs SOX4-TNNC1 SOX4 chr6 21597212 TNNC1 chr3 52486493 Exonic hg19 NA AA909038 Out-of-frame Inter-chr p22.3 Transcription factor p21.1 107734 ChimerSeq ChiTaRs ChiTaRs KIF5C-KIF3C KIF5C chr2 149881976 KIF3C chr2 26205232 Exonic hg19 NA M86011 Out-of-frame Intra-chr p23.3 107735 ChimerSeq ChiTaRs ChiTaRs SIRT3-MED25 SIRT3 chr11 235031 MED25 chr19 50334666 Exonic hg19 NA BF934224 Out-of-frame Inter-chr p15.5 Tumor suppressor gene q13.33 107736 ChimerSeq ChiTaRs ChiTaRs PGD-ZNF335 PGD chr1 10464303 ZNF335 chr20 44581025 Exonic hg19 NA CV813939 Out-of-frame Inter-chr p36.22 q13.12 Transcription factor 107737 ChimerSeq ChiTaRs ChiTaRs SLC25A44-SLC20A2 SLC25A44 chr1 156164040 SLC20A2 chr8 42302179 Exonic hg19 NA DA052497 Out-of-frame Inter-chr q22 p11.21 107738 ChimerSeq ChiTaRs ChiTaRs C2orf61-SECISBP2L C2orf61 chr2 47388915 SECISBP2L chr15 49288610 Exonic hg19 NA BP249981 Out-of-frame Inter-chr q21.1 107739 ChimerSeq ChiTaRs ChiTaRs MET-FAM3C MET chr7 116312632 FAM3C chr7 121000156 Exonic hg19 NA DA441238 Out-of-frame Intra-chr q31.2 TK:Met Oncogene q31.31 107740 ChimerSeq ChiTaRs ChiTaRs HTATSF1-PTMA HTATSF1 chrX 135592379 PTMA chr2 232576670 Exonic hg19 NA CN306050 Out-of-frame Inter-chr q26.3 q37.1 107741 ChimerSeq ChiTaRs ChiTaRs MRPL19-PTBP2 MRPL19 chr2 75881911 PTBP2 chr1 97279392 Exonic hg19 NA BG708259 Out-of-frame Inter-chr p12 p21.3 107742 ChimerSeq ChiTaRs ChiTaRs PALM2-AKAP2-FGF18 PALM2-AKAP2 chr9 112932805 FGF18 chr5 170883964 Exonic hg19 NA AA234133 Out-of-frame Inter-chr q31.3 q35.1 107743 ChimerSeq ChiTaRs ChiTaRs SPTAN1-CIDEC SPTAN1 chr9 131395941 CIDEC chr3 9989230 Exonic hg19 NA H05466 Out-of-frame Inter-chr q34.11 p25.3 107744 ChimerSeq ChiTaRs ChiTaRs MAGEA4-SMPD1 MAGEA4 chrX 151092837 SMPD1 chr11 6413115 Exonic hg19 NA AW951504 Out-of-frame Inter-chr q28 p15.4 107745 ChimerSeq ChiTaRs ChiTaRs NEUROD6-CAPN1 NEUROD6 chr7 31380340 CAPN1 chr11 64974116 Exonic hg19 NA AK299619 Out-of-frame Inter-chr p14.3 Transcription factor q13.1 107746 ChimerSeq ChiTaRs ChiTaRs TXNIP-DMD TXNIP chr1 145442635 DMD chrX 32768992 Exonic hg19 NA BF508150 Out-of-frame Inter-chr q21.1 Tumor suppressor gene p21.1 Tumor suppressor gene 107747 ChimerSeq ChiTaRs ChiTaRs CD74-PUM2 CD74 chr5 149785874 PUM2 chr2 20448858 Exonic hg19 NA BF830033 Out-of-frame Inter-chr q33.1 p24.1 107748 ChimerSeq ChiTaRs ChiTaRs LRRC47-EIF3I LRRC47 chr1 3697891 EIF3I chr1 32697002 Exonic hg19 NA AA032022 Out-of-frame Intra-chr p36.32 p35.2 107749 ChimerSeq ChiTaRs ChiTaRs AAK1-PDZRN4 AAK1 chr2 69752187 PDZRN4 chr12 41966915 Exonic hg19 NA BF944461 Out-of-frame Inter-chr p13.3 Other:NAK q12 107750 ChimerSeq ChiTaRs ChiTaRs MRFAP1-DAGLB MRFAP1 chr4 6642847 DAGLB chr7 6502348 Exonic hg19 NA BC014568 Out-of-frame Inter-chr p16.1 p22.1 107751 ChimerSeq ChiTaRs ChiTaRs NUCKS1-CCDC97 NUCKS1 chr1 205719288 CCDC97 chr19 41829181 Exonic hg19 NA AW733023 Out-of-frame Inter-chr q32.1 q13.2 107752 ChimerSeq ChiTaRs ChiTaRs CAMTA1-ERRFI1 CAMTA1 chr1 6885271 ERRFI1 chr1 8074237 Exonic hg19 NA BF348299 Out-of-frame Intra-chr p36.31 Tumor suppressor gene Transcription factor p36.23 Tumor suppressor gene 107753 ChimerSeq ChiTaRs ChiTaRs ACTB-ACO2 ACTB chr7 5570232 ACO2 chr22 41903933 Exonic hg19 NA DA891854 3'UTR-5'UTR Inter-chr p22.1 q13.2 107754 ChimerSeq ChiTaRs ChiTaRs ATP6V1G1-TMBIM6 ATP6V1G1 chr9 117360349 TMBIM6 chr12 50158562 Exonic hg19 NA BP304847 Out-of-frame Inter-chr q32 q13.12 107755 ChimerSeq ChiTaRs ChiTaRs MOGS-HBB MOGS chr2 74689159 HBB chr11 5246906 Exonic hg19 NA BF899407 Out-of-frame Inter-chr p13.1 p15.4 107756 ChimerSeq ChiTaRs ChiTaRs ACTB-BSG ACTB chr7 5570232 BSG chr19 580716 Exonic hg19 NA BP379102 3'UTR-CDS Inter-chr p22.1 p13.3 107757 ChimerSeq ChiTaRs ChiTaRs RBM10-UBC RBM10 chrX 47046212 UBC chr12 125396757 Exonic hg19 NA BQ010117 Out-of-frame Inter-chr p11.3 q24.31 107758 ChimerSeq ChiTaRs ChiTaRs LAMB2-HNRNPD LAMB2 chr3 49162755 HNRNPD chr4 83275291 Exonic hg19 NA AA010774 Out-of-frame Inter-chr p21.31 q21.22 107759 ChimerSeq ChiTaRs ChiTaRs TMEM59-CLN8 TMEM59 chr1 54518911 CLN8 chr8 1730942 Exonic hg19 NA AA368225 Out-of-frame Inter-chr p32.3 p23.3 107760 ChimerSeq ChiTaRs ChiTaRs TGOLN2-COPA TGOLN2 chr2 85549795 COPA chr1 160259845 Exonic hg19 NA CD692127 Out-of-frame Inter-chr p11.2 q23.2 107761 ChimerSeq ChiTaRs ChiTaRs GPC4-BCL2A1 GPC4 chrX 132435576 BCL2A1 chr15 80253234 Exonic hg19 NA BP296794 Out-of-frame Inter-chr q26.2 q25.1 107762 ChimerSeq ChiTaRs ChiTaRs UBE2L6-DDX26B UBE2L6 chr11 57335143 DDX26B chrX 134703262 Exonic hg19 NA BC071753 Out-of-frame Inter-chr q12.1 107763 ChimerSeq ChiTaRs ChiTaRs DENND5A-PPFIBP2 DENND5A chr11 9286751 PPFIBP2 chr11 7631521 Exonic hg19 NA BI669204 5'UTR-CDS Intra-chr p15.4 p15.4 107764 ChimerSeq ChiTaRs ChiTaRs USP6NL-GPHN USP6NL chr10 11653573 GPHN chr14 67291192 Exonic hg19 NA DB087988 Out-of-frame Inter-chr p14 q23.3 107765 ChimerSeq ChiTaRs ChiTaRs UBE2J2-RPL38 UBE2J2 chr1 1209212 RPL38 chr17 72205942 Exonic hg19 NA AK075017 5'UTR-CDS Inter-chr p36.33 q25.1 107766 ChimerSeq ChiTaRs ChiTaRs SF3B1-C11orf83 SF3B1 chr2 198299734 C11orf83 chr11 62439296 Exonic hg19 NA CB218316 Out-of-frame Inter-chr q33.1 Oncogene 107767 ChimerSeq ChiTaRs ChiTaRs SGPL1-FKBP15 SGPL1 chr10 72639744 FKBP15 chr9 116022800 Exonic hg19 NA CA424723 Out-of-frame Inter-chr q22.1 q32 107768 ChimerSeq ChiTaRs ChiTaRs NOL6-TMEM59L NOL6 chr9 33473892 TMEM59L chr19 18729254 Exonic hg19 NA BG700433 Out-of-frame Inter-chr p13.3 p13.11 107769 ChimerSeq ChiTaRs ChiTaRs SOX30-GOLGA5 SOX30 chr5 157065298 GOLGA5 chr14 93263831 Exonic hg19 NA AI917322 Out-of-frame Inter-chr q33.3 Transcription factor q32.12 107770 ChimerSeq ChiTaRs ChiTaRs SURF4-ACO2 SURF4 chr9 136242931 ACO2 chr22 41921254 Exonic hg19 NA DA577703 Out-of-frame Inter-chr q13.2 107771 ChimerSeq ChiTaRs ChiTaRs SAT1-MPHOSPH8 SAT1 chrX 23804327 MPHOSPH8 chr13 20224148 Exonic hg19 NA CA848235 5'UTR-CDS Inter-chr p22.11 q12.11 107772 ChimerSeq ChiTaRs ChiTaRs DPYSL2-NFU1 DPYSL2 chr8 26514277 NFU1 chr2 69627645 Exonic hg19 NA BP350453 Out-of-frame Inter-chr p21.2 p13.3 107773 ChimerSeq ChiTaRs ChiTaRs PUM2-ATF5 PUM2 chr2 20450602 ATF5 chr19 50436873 Exonic hg19 NA BE708509 Out-of-frame Inter-chr p24.1 q13.33 Transcription factor 107774 ChimerSeq ChiTaRs ChiTaRs CD81-B2M CD81 chr11 2417906 B2M chr15 45009838 Exonic hg19 NA BP430049 Out-of-frame Inter-chr p15.5 Oncogene 107775 ChimerSeq ChiTaRs ChiTaRs IDH1-RPS24 IDH1 chr2 209108329 RPS24 chr10 79795397 Exonic hg19 NA BU153261 Out-of-frame Inter-chr q34 Oncogene Tumor suppressor gene q22.3 107776 ChimerSeq ChiTaRs ChiTaRs SRP9-FGF12 SRP9 chr1 225978111 FGF12 chr3 191861384 Exonic hg19 NA DB490454 Out-of-frame Inter-chr q42.12 q29 107777 ChimerSeq ChiTaRs ChiTaRs RAB7A-DICER1 RAB7A chr3 128525339 DICER1 chr14 95556654 Exonic hg19 NA AI377096 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q32.13 Oncogene Tumor suppressor gene 107778 ChimerSeq ChiTaRs ChiTaRs NRF1-EIF4A1 NRF1 chr7 129367207 EIF4A1 chr17 7478436 Exonic hg19 NA BC006380 Out-of-frame Inter-chr q32.2 Tumor suppressor gene Transcription factor p13.1 107779 ChimerSeq ChiTaRs ChiTaRs UBAP2L-AKT1S1 UBAP2L chr1 154209588 AKT1S1 chr19 50372911 Exonic hg19 NA BM559400 Out-of-frame Inter-chr q21.3 q13.33 107780 ChimerSeq ChiTaRs ChiTaRs IL1RN-NUCKS1 IL1RN chr2 113887198 NUCKS1 chr1 205682562 Exonic hg19 NA CD520806 Out-of-frame Inter-chr q14.1 q32.1 107781 ChimerSeq ChiTaRs ChiTaRs ADCY2-WBSCR16 ADCY2 chr1 152005135 WBSCR16 chr7 74457085 Exonic hg19 NA CD365127 Out-of-frame Inter-chr p15.31 107782 ChimerSeq ChiTaRs ChiTaRs HOOK3-HOOK3 HOOK3 chr8 42877237 HOOK3 chr8 42877807 Exonic hg19 NA AA829758 Out-of-frame Intra-chr p11.21 Oncogene p11.21 Oncogene 107783 ChimerSeq ChiTaRs ChiTaRs SPARCL1-SGSM1 SPARCL1 chr4 88420732 SGSM1 chr22 25322581 Exonic hg19 NA DB570293 Out-of-frame Inter-chr q22.1 Tumor suppressor gene q11.23 107784 ChimerSeq ChiTaRs ChiTaRs NCL-NAP1L1 NCL chr2 232327959 NAP1L1 chr12 76447570 Exonic hg19 NA BF818583 Out-of-frame Inter-chr q37.1 q21.2 107785 ChimerSeq ChiTaRs ChiTaRs ALG14-LOC158435 ALG14 chr1 95538473 LOC158435 chr9 98855307 Exonic hg19 NA DA767890 5'UTR-5'UTR Inter-chr p21.3 107786 ChimerSeq ChiTaRs ChiTaRs ZNF736-CHMP1A ZNF736 chr7 63797362 CHMP1A chr16 89712314 Exonic hg19 NA DB033525 Out-of-frame Inter-chr q11.21 Transcription factor q24.3 107787 ChimerSeq ChiTaRs ChiTaRs ADAP1-NOLC1 ADAP1 chr7 994398 NOLC1 chr10 103921312 Exonic hg19 NA BM841194 5'UTR-CDS Inter-chr p22.3 q24.32 107788 ChimerSeq ChiTaRs ChiTaRs API5-PLIN3 API5 chr11 43346604 PLIN3 chr19 4838860 Exonic hg19 NA AI979287 Out-of-frame Inter-chr p12 p13.3 107789 ChimerSeq ChiTaRs ChiTaRs MCL1-APLNR MCL1 chr1 150548446 APLNR chr11 57002924 Exonic hg19 NA DA941414 Out-of-frame Inter-chr q21.2 Oncogene q12.1 107790 ChimerSeq ChiTaRs ChiTaRs MAPK9-ITPR1 MAPK9 chr5 179660926 ITPR1 chr3 4747904 Exonic hg19 NA AI096773 Out-of-frame Inter-chr q35.3 Tumor suppressor gene p26.1 107791 ChimerSeq ChiTaRs ChiTaRs CERS6-SPP1 CERS6 chr2 169630167 SPP1 chr4 88904333 Exonic hg19 NA BE815041 Out-of-frame Inter-chr q24.3 q22.1 107792 ChimerSeq ChiTaRs ChiTaRs PRRC2C-PHLDA1 PRRC2C chr1 171546738 PHLDA1 chr12 76424546 Exonic hg19 NA BG005109 Out-of-frame Inter-chr q24.3 q21.2 107793 ChimerSeq ChiTaRs ChiTaRs SCCPDH-SMARCC2 SCCPDH chr1 246929436 SMARCC2 chr12 56563562 Exonic hg19 NA DB089858 Out-of-frame Inter-chr q44 q13.2 107794 ChimerSeq ChiTaRs ChiTaRs C1orf50-KCTD2 C1orf50 chr1 43241415 KCTD2 chr17 73061244 Exonic hg19 NA BM683151 Out-of-frame Inter-chr p34.2 q25.1 107795 ChimerSeq ChiTaRs ChiTaRs UTP11L-TRAPPC4 UTP11L chr1 38489244 TRAPPC4 chr11 118889469 Exonic hg19 NA AK225272 Out-of-frame Inter-chr 107796 ChimerSeq ChiTaRs ChiTaRs SYN1-GM2A SYN1 chrX 47446188 GM2A chr5 150647002 Exonic hg19 NA BU620269 Out-of-frame Inter-chr p11.23 q33.1 107797 ChimerSeq ChiTaRs ChiTaRs KCNAB2-PDLIM7 KCNAB2 chr1 6142303 PDLIM7 chr5 176917296 Exonic hg19 NA BP378678 Out-of-frame Inter-chr p36.31 q35.3 107798 ChimerSeq ChiTaRs ChiTaRs EIF4E2-CREBBP EIF4E2 chr2 233421174 CREBBP chr16 3830756 Exonic hg19 NA DA778521 Out-of-frame Inter-chr q37.1 p13.3 Oncogene Tumor suppressor gene 107799 ChimerSeq ChiTaRs ChiTaRs LHX3-DDB2 LHX3 chr9 139088905 DDB2 chr11 47236571 Exonic hg19 NA BC001160 Out-of-frame Inter-chr q34.3 Transcription factor p11.2 Oncogene Tumor suppressor gene 107800 ChimerSeq ChiTaRs ChiTaRs FRYL-PRRX1 FRYL chr4 48548258 PRRX1 chr1 170706897 Exonic hg19 NA CV569065 Out-of-frame Inter-chr p11 q24.2 Transcription factor 107801 ChimerSeq ChiTaRs ChiTaRs RAB11FIP1-SV2C RAB11FIP1 chr8 37719068 SV2C chr5 75538018 Exonic hg19 NA BM825908 Out-of-frame Inter-chr p11.23 q13.3 107802 ChimerSeq ChiTaRs ChiTaRs IER5L-NEMF IER5L chr9 131940540 NEMF chr14 50088318 Exonic hg19 NA AK075051 5'UTR-3'UTR Inter-chr q34.11 q21.3 107803 ChimerSeq ChiTaRs ChiTaRs NUPL2-TMC8 NUPL2 chr7 23226765 TMC8 chr17 76137496 Exonic hg19 NA CR984678 CDS-3'UTR Inter-chr p15.3 q25.3 107804 ChimerSeq ChiTaRs ChiTaRs TTC40-KSR1 TTC40 chr10 134637545 KSR1 chr17 25909946 Exonic hg19 NA U43586 Out-of-frame Inter-chr q11.2 TKL:RAF 107805 ChimerSeq ChiTaRs ChiTaRs CCDC146-EPB41L4B CCDC146 chr7 76829144 EPB41L4B chr9 112002682 Exonic hg19 NA Z36531 Out-of-frame Inter-chr q11.23 q31.3 107806 ChimerSeq ChiTaRs ChiTaRs EIF3A-SMARCC1 EIF3A chr10 120802060 SMARCC1 chr3 47632267 Exonic hg19 NA BE797876 Out-of-frame Inter-chr q26.11 p21.31 Tumor suppressor gene 107807 ChimerSeq ChiTaRs ChiTaRs LOC220729-KIF3A LOC220729 chr3 197344966 KIF3A chr5 132028776 Exonic hg19 NA BE563966 Out-of-frame Inter-chr q31.1 107808 ChimerSeq ChiTaRs ChiTaRs GNB1-ELF3 GNB1 chr1 1718329 ELF3 chr1 201984416 Exonic hg19 NA BE140587 Out-of-frame Intra-chr p36.33 q32.1 Transcription factor 107809 ChimerSeq ChiTaRs ChiTaRs DMTN-PSAP DMTN chr8 21940036 PSAP chr10 73576180 Exonic hg19 NA CA433301 Out-of-frame Inter-chr p21.3 q22.1 107810 ChimerSeq ChiTaRs ChiTaRs CYCS-RDH11 CYCS chr7 25162745 RDH11 chr14 68144286 Exonic hg19 NA AI928382 Out-of-frame Inter-chr p15.3 q24.1 107811 ChimerSeq ChiTaRs ChiTaRs KIF3C-GIT1 KIF3C chr2 26205114 GIT1 chr17 27900494 Exonic hg19 NA AB290173 Out-of-frame Inter-chr p23.3 q11.2 107812 ChimerSeq ChiTaRs ChiTaRs TXN-IL1B TXN chr9 113018762 IL1B chr2 113587565 Exonic hg19 NA AA362147 Out-of-frame Inter-chr q31.3 q14.1 107813 ChimerSeq ChiTaRs ChiTaRs ANXA1-U2SURP ANXA1 chr9 75775236 U2SURP chr3 142769845 Exonic hg19 NA CB132862 Out-of-frame Inter-chr q21.13 Tumor suppressor gene q23 107814 ChimerSeq ChiTaRs ChiTaRs EIF4G2-STIP1 EIF4G2 chr11 10821890 STIP1 chr11 63971945 Exonic hg19 NA BG261367 Out-of-frame Intra-chr p15.4 q13.1 107815 ChimerSeq ChiTaRs ChiTaRs HDAC1-PGA3 HDAC1 chr1 32792661 PGA3 chr11 60980279 Exonic hg19 NA BP342282 Out-of-frame Inter-chr p35.2 Tumor suppressor gene q12.2 107816 ChimerSeq ChiTaRs ChiTaRs CCDC12-SART3 CCDC12 chr3 47018201 SART3 chr12 108920105 Exonic hg19 NA BE932204 Out-of-frame Inter-chr p21.31 q23.3 107817 ChimerSeq ChiTaRs ChiTaRs PSMC2-APC PSMC2 chr7 102995381 APC chr5 112177806 Exonic hg19 NA DA326202 Out-of-frame Inter-chr q22.1 q22.2 Oncogene Tumor suppressor gene 107818 ChimerSeq ChiTaRs ChiTaRs NAT8L-MDM4 NAT8L chr4 2067219 MDM4 chr1 204518878 Exonic hg19 NA AW128860 Out-of-frame Inter-chr p16.3 q32.1 Oncogene 107819 ChimerSeq ChiTaRs ChiTaRs FYCO1-SAT1 FYCO1 chr3 46003790 SAT1 chrX 23803976 Exonic hg19 NA H56980 Out-of-frame Inter-chr p21.31 p22.11 107820 ChimerSeq ChiTaRs ChiTaRs SCD-SLC25A26 SCD chr10 102108082 SLC25A26 chr3 66430766 Exonic hg19 NA BP243784 Out-of-frame Inter-chr q24.31 107821 ChimerSeq ChiTaRs ChiTaRs ALB-SERPING1 ALB chr4 74274476 SERPING1 chr11 57381845 Exonic hg19 NA BP294362 Out-of-frame Inter-chr q13.3 q12.1 107822 ChimerSeq ChiTaRs ChiTaRs GLIPR2-KLHL6 GLIPR2 chr9 36162958 KLHL6 chr3 183206355 Exonic hg19 NA BE834616 Out-of-frame Inter-chr p13.3 q27.1 107823 ChimerSeq ChiTaRs ChiTaRs SEC24B-MALAT1 SEC24B chr4 110384622 MALAT1 chr11 65270650 Exonic hg19 NA AV726458 Out-of-frame Inter-chr q25 q13.1 107824 ChimerSeq ChiTaRs ChiTaRs DNAJB6-FTX DNAJB6 chr7 157155924 FTX chrX 73470211 Exonic hg19 NA AW375983 Out-of-frame Inter-chr q36.3 q13.2 107825 ChimerSeq ChiTaRs ChiTaRs OGG1-MTCH1 OGG1 chr3 9804597 MTCH1 chr6 36940526 Exonic hg19 NA BQ184316 Out-of-frame Inter-chr p25.3 p21.2 107826 ChimerSeq ChiTaRs ChiTaRs MAP7D2-SDC3 MAP7D2 chrX 20135016 SDC3 chr1 31345191 Exonic hg19 NA DA180215 Out-of-frame Inter-chr p22.12 p35.2 107827 ChimerSeq ChiTaRs ChiTaRs NASP-NPIPB7 NASP chr1 46083996 NPIPB7 chr16 28845876 Exonic hg19 NA BE268088 Out-of-frame Inter-chr p34.1 p12.1 107828 ChimerSeq ChiTaRs ChiTaRs LMO2-RNF126 LMO2 chr11 33880977 RNF126 chr19 647529 Exonic hg19 NA BC013977 Out-of-frame Inter-chr p13 p13.3 107829 ChimerSeq ChiTaRs ChiTaRs DCUN1D4-EML4 DCUN1D4 chr4 52779981 EML4 chr2 42556033 Exonic hg19 NA BE150925 Out-of-frame Inter-chr q12 p21 Oncogene 107830 ChimerSeq ChiTaRs ChiTaRs FABP4-PMP22 FABP4 chr8 82395468 PMP22 chr17 15143726 Exonic hg19 NA BP317019 Out-of-frame Inter-chr q21.13 p12 107831 ChimerSeq ChiTaRs ChiTaRs PROM1-HSD17B11 PROM1 chr4 15981067 HSD17B11 chr4 88288951 Exonic hg19 NA BF825079 Out-of-frame Intra-chr p15.32 q22.1 107832 ChimerSeq ChiTaRs ChiTaRs GAS5-ENG GAS5 chr1 173834817 ENG chr9 130605372 Exonic hg19 NA DA942626 3'UTR-CDS Inter-chr q25.1 Tumor suppressor gene q34.11 107833 ChimerSeq ChiTaRs ChiTaRs COPB2-NDUFV1 COPB2 chr3 139077892 NDUFV1 chr11 67374483 Exonic hg19 NA CA420159 Out-of-frame Inter-chr q23 q13.2 107834 ChimerSeq ChiTaRs ChiTaRs RPS24-LUZP1 RPS24 chr10 79800399 LUZP1 chr1 23420165 Exonic hg19 NA BG489521 Out-of-frame Inter-chr q22.3 p36.12 107835 ChimerSeq ChiTaRs ChiTaRs MRPL43-FAM127A MRPL43 chr10 102746220 FAM127A chrX 134166466 Exonic hg19 NA AI087848 Out-of-frame Inter-chr q24.31 107836 ChimerSeq ChiTaRs ChiTaRs CCDC80-SLC24A5 CCDC80 chr3 112324595 SLC24A5 chr15 48433369 Exonic hg19 NA AA625303 Out-of-frame Inter-chr q13.2 q21.1 107837 ChimerSeq ChiTaRs ChiTaRs CD74-MMP3 CD74 chr5 149792314 MMP3 chr11 102713225 Exonic hg19 NA DA976094 Out-of-frame Inter-chr q33.1 q22.2 107838 ChimerSeq ChiTaRs ChiTaRs CC2D2A-FANCF CC2D2A chr4 15482848 FANCF chr11 22644608 Exonic hg19 NA BC017792 Out-of-frame Inter-chr p15.32 p14.3 Oncogene 107839 ChimerSeq ChiTaRs ChiTaRs PSAP-VRK3 PSAP chr10 73578467 VRK3 chr19 50506373 Exonic hg19 NA BF918002 Out-of-frame Inter-chr q22.1 q13.33 CK1:VRK 107840 ChimerSeq ChiTaRs ChiTaRs TDGF1P3-TDGF1 TDGF1P3 chrX 109765819 TDGF1 chr3 46622853 Exonic hg19 NA CN274377 Out-of-frame Inter-chr q23 p21.31 Tumor suppressor gene 107841 ChimerSeq ChiTaRs ChiTaRs JAZF1-CDCA7L JAZF1 chr7 28220251 CDCA7L chr7 21947891 Exonic hg19 NA DA303712 Out-of-frame Intra-chr p15.1 Transcription factor p15.3 107842 ChimerSeq ChiTaRs ChiTaRs CCNB1-FNDC3A CCNB1 chr5 68464123 FNDC3A chr13 49781684 Exonic hg19 NA BI462019 Out-of-frame Inter-chr q13.2 q14.2 107843 ChimerSeq ChiTaRs ChiTaRs HIST2H3C-HNRNPK HIST2H3C chr1 149812742 HNRNPK chr9 86583824 Exonic hg19 NA BC063540 Out-of-frame Inter-chr q21.2 q21.32 107844 ChimerSeq ChiTaRs ChiTaRs ARHGEF10L-LGALS4 ARHGEF10L chr1 17909092 LGALS4 chr19 39292366 Exonic hg19 NA BG981808 Out-of-frame Inter-chr p36.13 107845 ChimerSeq ChiTaRs ChiTaRs HNRNPAB-SND1 HNRNPAB chr5 177632936 SND1 chr7 127591552 Exonic hg19 NA BF309478 Out-of-frame Inter-chr q35.3 q32.1 107846 ChimerSeq ChiTaRs ChiTaRs AK3-EHMT1 AK3 chr9 4742024 EHMT1 chr9 140611076 Exonic hg19 NA DA687483 Out-of-frame Intra-chr p24.1 q34.3 107847 ChimerSeq ChiTaRs ChiTaRs RNU6-42-ATR RNU6-42 chr3 180949632 ATR chr3 142217506 Exonic hg19 NA DW440900 Out-of-frame Intra-chr q23 transporter 107848 ChimerSeq ChiTaRs ChiTaRs CREB3-SNRPA CREB3 chr9 35737107 SNRPA chr19 41268805 Exonic hg19 NA CD366322 3'UTR-CDS Inter-chr p13.3 Transcription factor q13.2 107849 ChimerSeq ChiTaRs ChiTaRs CAPN6-COL6A2 CAPN6 chrX 110507171 COL6A2 chr21 47531447 Exonic hg19 NA CN351992 Out-of-frame Inter-chr q23 q22.3 107850 ChimerSeq ChiTaRs ChiTaRs SMPDL3B-SNX1 SMPDL3B chr1 28269989 SNX1 chr15 64404777 Exonic hg19 NA DA812972 Out-of-frame Inter-chr p35.3 q22.31 107851 ChimerSeq ChiTaRs ChiTaRs EIF4A2-LMNA EIF4A2 chr3 186505539 LMNA chr1 156084526 Exonic hg19 NA DA558800 Out-of-frame Inter-chr q27.3 q22 107852 ChimerSeq ChiTaRs ChiTaRs SORT1-FAF1 SORT1 chr1 109935734 FAF1 chr1 51048291 Exonic hg19 NA DB467995 Out-of-frame Intra-chr p13.3 p32.3 107853 ChimerSeq ChiTaRs ChiTaRs FATE1-TMEM131 FATE1 chrX 150891630 TMEM131 chr2 98372803 Exonic hg19 NA AK057369 Out-of-frame Inter-chr q28 q11.2 107854 ChimerSeq ChiTaRs ChiTaRs USP34-HERPUD1 USP34 chr2 61577421 HERPUD1 chr16 56973904 Exonic hg19 NA AA419424 Out-of-frame Inter-chr p15 q13 107855 ChimerSeq ChiTaRs ChiTaRs RNU11-HBS1L RNU11 chr1 28975228 HBS1L chr6 135360861 Exonic hg19 NA DB132651 Out-of-frame Inter-chr p35.3 q23.3 107856 ChimerSeq ChiTaRs ChiTaRs MAN1A2-KIAA2018 MAN1A2 chr1 118042028 KIAA2018 chr3 113374275 Exonic hg19 NA AK023308 Out-of-frame Inter-chr p12 107857 ChimerSeq ChiTaRs ChiTaRs HLA-DPB1-NOS3 HLA-DPB1 chr6 4535055 NOS3 chr7 150691024 Exonic hg19 NA BU754328 Out-of-frame Inter-chr q36.1 107858 ChimerSeq ChiTaRs ChiTaRs ZC3HC1-HMGCS1 ZC3HC1 chr7 129673797 HMGCS1 chr5 43289498 Exonic hg19 NA AK025736 Out-of-frame Inter-chr q32.2 p12 107859 ChimerSeq ChiTaRs ChiTaRs WDR74-RMND5A WDR74 chr11 62609281 RMND5A chr2 87017609 Exonic hg19 NA BJ996428 Out-of-frame Inter-chr q12.3 p11.2 107860 ChimerSeq ChiTaRs ChiTaRs WDR74-SART3 WDR74 chr11 62609281 SART3 chr12 108942936 Exonic hg19 NA DA352273 Out-of-frame Inter-chr q12.3 q23.3 107861 ChimerSeq ChiTaRs ChiTaRs C2orf61-MCF2L2 C2orf61 chr2 47387852 MCF2L2 chr3 182988389 Exonic hg19 NA AI039637 Out-of-frame Inter-chr q27.1 107862 ChimerSeq ChiTaRs ChiTaRs CPSF3L-ADCK3 CPSF3L chr1 1260017 ADCK3 chr1 227165142 Exonic hg19 NA DB118072 Out-of-frame Intra-chr Atypical:ABC1 107863 ChimerSeq ChiTaRs ChiTaRs FUT9-LEMD2 FUT9 chr6 96562003 LEMD2 chr6 33747901 Exonic hg19 NA DA074613 5'UTR-CDS Intra-chr q16.1 p21.31 107864 ChimerSeq ChiTaRs ChiTaRs ACTB-LOC100507412 ACTB chr7 5570232 LOC100507412 chr? 110001 Exonic hg19 NA DA501316 3'UTR-5'UTR Inter-chr p22.1 107865 ChimerSeq ChiTaRs ChiTaRs DNALI1-CXCL1 DNALI1 chr1 38034608 CXCL1 chr4 74735118 Exonic hg19 NA CD364755 Out-of-frame Inter-chr p34.3 q13.3 107866 ChimerSeq ChiTaRs ChiTaRs TMEM214-SPRYD4 TMEM214 chr2 27260524 SPRYD4 chr12 56862383 Exonic hg19 NA BQ684668 Out-of-frame Inter-chr p23.3 q13.3 107867 ChimerSeq ChiTaRs ChiTaRs INPP4B-IST1 INPP4B chr4 143689122 IST1 chr16 71924472 Exonic hg19 NA DB020243 Out-of-frame Inter-chr q31.21 Tumor suppressor gene q22.2 107868 ChimerSeq ChiTaRs ChiTaRs CADPS-AMY2B CADPS chr3 62631434 AMY2B chr1 104122016 Exonic hg19 NA AW583683 Out-of-frame Inter-chr p14.2 p21.1 107869 ChimerSeq ChiTaRs ChiTaRs H2AFZ-CSDE1 H2AFZ chr4 100871430 CSDE1 chr1 115279393 Exonic hg19 NA DA903661 Out-of-frame Inter-chr q23 p13.2 107870 ChimerSeq ChiTaRs ChiTaRs ASTN2-DDX21 ASTN2 chr9 119461323 DDX21 chr10 70738619 Exonic hg19 NA CN278368 Out-of-frame Inter-chr q33.1 q22.1 107871 ChimerSeq ChiTaRs ChiTaRs HMGA1-LTB HMGA1 chr6 34213234 LTB chr6 2879419 Exonic hg19 NA AA287531 Out-of-frame Intra-chr p21.31 Transcription factor 107872 ChimerSeq ChiTaRs ChiTaRs RASGEF1B-MTOR RASGEF1B chr4 82366349 MTOR chr1 11317791 Exonic hg19 NA BF845885 Out-of-frame Inter-chr q21.22 p36.22 Oncogene 107873 ChimerSeq ChiTaRs ChiTaRs TOR1A-PTGES3 TOR1A chr9 132583908 PTGES3 chr12 57080509 Exonic hg19 NA BU634503 Out-of-frame Inter-chr q34.11 q13.3 107874 ChimerSeq ChiTaRs ChiTaRs MIR548F1-MET MIR548F1 chr1 186344416 MET chr7 116414931 Exonic hg19 NA U19348 Out-of-frame Inter-chr q21.1 q31.2 TK:Met Oncogene 107875 ChimerSeq ChiTaRs ChiTaRs SNRPE-PRTFDC1 SNRPE chr1 203832853 PRTFDC1 chr10 25160927 Exonic hg19 NA S60260 In-Frame Inter-chr q32.1 p12.1 107876 ChimerSeq ChiTaRs ChiTaRs NXF3-GOLGA8A NXF3 chrX 102335584 GOLGA8A chr15 34673608 Exonic hg19 NA AK294826 Out-of-frame Inter-chr q22.1 q14 107877 ChimerSeq ChiTaRs ChiTaRs SLC12A8-HTN1 SLC12A8 chr3 124931583 HTN1 chr4 70916155 Exonic hg19 NA AK131070 Out-of-frame Inter-chr q21.2 107878 ChimerSeq ChiTaRs ChiTaRs MYO10-SETX MYO10 chr5 16818263 SETX chr9 135137349 Exonic hg19 NA H83516 Out-of-frame Inter-chr p15.1 q34.13 107879 ChimerSeq ChiTaRs ChiTaRs NBPF11-NBPF14 NBPF11 chr1 147931880 NBPF14 chr1 145004781 Exonic hg19 NA BC099898 Out-of-frame Intra-chr q21.2 q21.2 107880 ChimerSeq ChiTaRs ChiTaRs CPLX2-RAB6B CPLX2 chr5 175306010 RAB6B chr3 133543087 Exonic hg19 NA AK057826 Out-of-frame Inter-chr q35.2 q22.1 107881 ChimerSeq ChiTaRs ChiTaRs ACY1-MC1R ACY1 chr3 52023209 MC1R chr16 89987059 Exonic hg19 NA AI783613 Out-of-frame Inter-chr p21.2 Tumor suppressor gene q24.3 107882 ChimerSeq ChiTaRs ChiTaRs AP3M1-IFFO2 AP3M1 chr10 75883301 IFFO2 chr1 19230774 Exonic hg19 NA BM714001 Out-of-frame Inter-chr q22.2 p36.13 107883 ChimerSeq ChiTaRs ChiTaRs CCDC71-TTC3 CCDC71 chr3 49200054 TTC3 chr21 38534290 Exonic hg19 NA BU688294 Out-of-frame Inter-chr p21.31 q22.13 107884 ChimerSeq ChiTaRs ChiTaRs MAL2-LEPRE1 MAL2 chr8 120255727 LEPRE1 chr1 43221227 Exonic hg19 NA BM928482 Out-of-frame Inter-chr q24.12 107885 ChimerSeq ChiTaRs ChiTaRs C3orf70-PHF20 C3orf70 chr3 184870802 PHF20 chr20 34485066 Exonic hg19 NA AX746993 5'UTR-CDS Inter-chr q27.2 q11.22 Transcription factor 107886 ChimerSeq ChiTaRs ChiTaRs DCUN1D1-QTRT1 DCUN1D1 chr3 182683538 QTRT1 chr19 10812792 Exonic hg19 NA BE273347 Out-of-frame Inter-chr q26.33 Oncogene p13.2 107887 ChimerSeq ChiTaRs ChiTaRs TIMM17B-SPINT1 TIMM17B chrX 48751045 SPINT1 chr15 41149426 Exonic hg19 NA BU676136 Out-of-frame Inter-chr p11.23 q15.1 107888 ChimerSeq ChiTaRs ChiTaRs NDUFS2-ATP1A3 NDUFS2 chr1 161182190 ATP1A3 chr19 42482850 Exonic hg19 NA BQ339562 Out-of-frame Inter-chr q23.3 q13.2 107889 ChimerSeq ChiTaRs ChiTaRs NDUFS6-GGA2 NDUFS6 chr5 1801609 GGA2 chr16 23489780 Exonic hg19 NA DA942070 Out-of-frame Inter-chr p15.33 p12.2 107890 ChimerSeq ChiTaRs ChiTaRs PCBD2-GSTZ1 PCBD2 chr5 134260294 GSTZ1 chr14 77791211 Exonic hg19 NA BM833317 Out-of-frame Inter-chr q31.1 q24.3 107891 ChimerSeq ChiTaRs ChiTaRs THG1L-PLEKHA1 THG1L chr5 157164961 PLEKHA1 chr10 124190917 Exonic hg19 NA BF668228 Out-of-frame Inter-chr q33.3 q26.13 107892 ChimerSeq ChiTaRs ChiTaRs NCAPG2-LYAR NCAPG2 chr7 158447378 LYAR chr4 4276379 Exonic hg19 NA CN337717 Out-of-frame Inter-chr q36.3 p16.3 107893 ChimerSeq ChiTaRs ChiTaRs RAVER2-CPSF3L RAVER2 chr1 65210871 CPSF3L chr1 1250529 Exonic hg19 NA DB161995 Out-of-frame Intra-chr p31.3 107894 ChimerSeq ChiTaRs ChiTaRs THAP3-SNRK THAP3 chr1 6694416 SNRK chr3 43392474 Exonic hg19 NA DR978053 Out-of-frame Inter-chr p36.31 Transcription factor p22.1 CAMK:CAMKL 107895 ChimerSeq ChiTaRs ChiTaRs LMNA-MRAS LMNA chr1 156052975 MRAS chr3 138116164 Exonic hg19 NA DA808693 5'UTR-5'UTR Inter-chr q22 q22.3 107896 ChimerSeq ChiTaRs ChiTaRs ZFAT-S100A13 ZFAT chr8 135649929 S100A13 chr1 153604392 Exonic hg19 NA BC025423 Out-of-frame Inter-chr q24.22 Transcription factor q21.3 107897 ChimerSeq ChiTaRs ChiTaRs RPL31-EPHA5 RPL31 chr2 101622861 EPHA5 chr4 66439408 Exonic hg19 NA AI110800 Out-of-frame Inter-chr q11.2 q13.2 Oncogene 107898 ChimerSeq ChiTaRs ChiTaRs GTF2I-NCL GTF2I chr7 74103524 NCL chr2 232319710 Exonic hg19 NA AI884950 Out-of-frame Inter-chr q11.23 Transcription factor q37.1 107899 ChimerSeq ChiTaRs ChiTaRs EIF4A2-FUS EIF4A2 chr3 186506183 FUS chr16 31202784 Exonic hg19 NA BM773122 Out-of-frame Inter-chr q27.3 p11.2 Tumor suppressor gene 107900 ChimerSeq ChiTaRs ChiTaRs PARP14-HPS5 PARP14 chr3 122448315 HPS5 chr11 18319596 Exonic hg19 NA CB047385 Out-of-frame Inter-chr q21.1 p15.1 107901 ChimerSeq ChiTaRs ChiTaRs CC2D2A-FANCF CC2D2A chr4 15482848 FANCF chr11 22644895 Exonic hg19 NA BG494289 Out-of-frame Inter-chr p15.32 p14.3 Oncogene 107902 ChimerSeq ChiTaRs ChiTaRs LHX3-DDB2 LHX3 chr9 139088886 DDB2 chr11 47236571 Exonic hg19 NA BE254006 Out-of-frame Inter-chr q34.3 Transcription factor p11.2 Oncogene Tumor suppressor gene 107903 ChimerSeq ChiTaRs ChiTaRs FLNA-UHMK1 FLNA chrX 153588916 UHMK1 chr1 162499085 Exonic hg19 NA CN332843 Out-of-frame Inter-chr q28 Tumor suppressor gene q23.3 107904 ChimerSeq ChiTaRs ChiTaRs ZBTB20-GNAS ZBTB20 chr3 114819136 GNAS chr20 57470665 Exonic hg19 NA CA405937 Out-of-frame Inter-chr q13.31 Transcription factor q13.32 Oncogene 107905 ChimerSeq ChiTaRs ChiTaRs FTH1-EXTL2 FTH1 chr11 61735103 EXTL2 chr1 101338424 Exonic hg19 NA BG506265 Out-of-frame Inter-chr q12.3 p21.2 Tumor suppressor gene 107906 ChimerSeq ChiTaRs ChiTaRs SLC3A1-ZNF341 SLC3A1 chr2 44507885 ZNF341 chr20 32375318 Exonic hg19 NA BP270725 Out-of-frame Inter-chr p21 q11.22 Transcription factor 107907 ChimerSeq ChiTaRs ChiTaRs IGF2-PLXNA1 IGF2 chr11 2159512 PLXNA1 chr3 126753958 Exonic hg19 NA DA661640 Out-of-frame Inter-chr p15.5 Oncogene q21.3 107908 ChimerSeq ChiTaRs ChiTaRs HEYL-ENTPD6 HEYL chr1 40091985 ENTPD6 chr20 25206438 Exonic hg19 NA BE250167 Out-of-frame Inter-chr p34.2 Transcription factor p11.21 107909 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-HEMGN INS-IGF2 chr11 2153395 HEMGN chr9 100692665 Exonic hg19 NA R29048 Out-of-frame Inter-chr p15.5 q22.33 Oncogene 107910 ChimerSeq ChiTaRs ChiTaRs CCIN-TBRG1 CCIN chr9 36169854 TBRG1 chr11 124496367 Exonic hg19 NA BP326540 Out-of-frame Inter-chr p13.3 q24.2 Tumor suppressor gene 107911 ChimerSeq ChiTaRs ChiTaRs NDUFB11-NASP NDUFB11 chrX 47004086 NASP chr1 46073408 Exonic hg19 NA CN266772 Out-of-frame Inter-chr p11.3 p34.1 107912 ChimerSeq ChiTaRs ChiTaRs IFRD1-CISD1 IFRD1 chr7 112115963 CISD1 chr10 60037055 Exonic hg19 NA ES315811 Out-of-frame Inter-chr q31.1 q21.1 107913 ChimerSeq ChiTaRs ChiTaRs CD59-LOC440944 CD59 chr11 33731131 LOC440944 chr3 9432128 Exonic hg19 NA BP430903 Out-of-frame Inter-chr p13 107914 ChimerSeq ChiTaRs ChiTaRs HLA-B-HLA-B HLA-B chr6 2655604 HLA-B chr6 2834530 Exonic hg19 NA AA826150 Out-of-frame Intra-chr 107915 ChimerSeq ChiTaRs ChiTaRs RPS23-MRPL30 RPS23 chr5 81574158 MRPL30 chr2 99879071 Exonic hg19 NA BQ222647 Out-of-frame Inter-chr q14.2 q11.2 107916 ChimerSeq ChiTaRs ChiTaRs IRF2BP2-CALM1 IRF2BP2 chr1 234741882 CALM1 chr14 90873556 Exonic hg19 NA BE765928 Out-of-frame Inter-chr q42.3 q32.11 107917 ChimerSeq ChiTaRs ChiTaRs NT5DC1-FAM160B1 NT5DC1 chr6 116429622 FAM160B1 chr10 116620989 Exonic hg19 NA AA467897 Out-of-frame Inter-chr q22.1 q25.3 107918 ChimerSeq ChiTaRs ChiTaRs CCDC36-PRELP CCDC36 chr3 49283627 PRELP chr1 203452298 Exonic hg19 NA BU727928 Out-of-frame Inter-chr p21.31 q32.1 107919 ChimerSeq ChiTaRs ChiTaRs DGAT1-GLTSCR2 DGAT1 chr8 145540305 GLTSCR2 chr19 48259043 Exonic hg19 NA AJ571972 Out-of-frame Inter-chr q24.3 Tumor suppressor gene 107920 ChimerSeq ChiTaRs ChiTaRs DCAF16-CXCL14 DCAF16 chr4 17803448 CXCL14 chr5 134907535 Exonic hg19 NA CB217635 Out-of-frame Inter-chr p15.31 q31.1 Tumor suppressor gene 107921 ChimerSeq ChiTaRs ChiTaRs SPCS1-EBNA1BP2 SPCS1 chr3 52742184 EBNA1BP2 chr1 43676600 Exonic hg19 NA BQ680964 Out-of-frame Inter-chr p21.1 p34.2 107922 ChimerSeq ChiTaRs ChiTaRs MCFD2-CD37 MCFD2 chr2 47277164 CD37 chr19 49843645 Exonic hg19 NA BC047709 Out-of-frame Inter-chr p21 q13.33 107923 ChimerSeq ChiTaRs ChiTaRs S100A13-MAT2B S100A13 chr1 153604262 MAT2B chr5 162939116 Exonic hg19 NA BP259408 Out-of-frame Inter-chr q21.3 q34 107924 ChimerSeq ChiTaRs ChiTaRs MGAT1-DCAF8 MGAT1 chr5 180237117 DCAF8 chr1 160209991 Exonic hg19 NA DA351137 Out-of-frame Inter-chr q35.3 q23.2 107925 ChimerSeq ChiTaRs ChiTaRs SMPD1-TRPC4 SMPD1 chr11 6412128 TRPC4 chr13 38357388 Exonic hg19 NA BP375800 Out-of-frame Inter-chr p15.4 q13.3 107926 ChimerSeq ChiTaRs ChiTaRs FAM136A-ATP2B4 FAM136A chr2 70529157 ATP2B4 chr1 203702348 Exonic hg19 NA DA212125 Out-of-frame Inter-chr p13.3 q32.1 107927 ChimerSeq ChiTaRs ChiTaRs GOLPH3L-AKT3 GOLPH3L chr1 150669630 AKT3 chr1 243858985 Exonic hg19 NA DB216983 Out-of-frame Intra-chr q21.3 AGC:Akt Oncogene 107928 ChimerSeq ChiTaRs ChiTaRs ASPH-NOC3L ASPH chr8 62596665 NOC3L chr10 96109870 Exonic hg19 NA BE173287 Out-of-frame Inter-chr q12.3 q23.33 107929 ChimerSeq ChiTaRs ChiTaRs UIMC1-MALAT1 UIMC1 chr5 176335695 MALAT1 chr11 65266555 Exonic hg19 NA CB986884 CDS-5'UTR Inter-chr q35.2 Tumor suppressor gene q13.1 107930 ChimerSeq ChiTaRs ChiTaRs IFI16-ENO1 IFI16 chr1 158979793 ENO1 chr1 8928047 Exonic hg19 NA DA702843 Out-of-frame Intra-chr q23.1 Tumor suppressor gene p36.23 107931 ChimerSeq ChiTaRs ChiTaRs BRD9-ACADVL BRD9 chr5 864145 ACADVL chr17 7126998 Exonic hg19 NA AI659311 Out-of-frame Inter-chr p15.33 p13.1 107932 ChimerSeq ChiTaRs ChiTaRs STEAP3-STEAP3 STEAP3 chr2 119994676 STEAP3 chr2 119994123 Exonic hg19 NA AV648015 Out-of-frame Intra-chr q14.2 q14.2 107933 ChimerSeq ChiTaRs ChiTaRs RYR2-CC2D2A RYR2 chr1 237983527 CC2D2A chr4 15483482 Exonic hg19 NA BM671510 Out-of-frame Inter-chr q43 p15.32 107934 ChimerSeq ChiTaRs ChiTaRs GPM6B-SLC26A2 GPM6B chrX 13792421 SLC26A2 chr5 149366700 Exonic hg19 NA BE766380 Out-of-frame Inter-chr p22.2 q32 107935 ChimerSeq ChiTaRs ChiTaRs SMC3-RNF13 SMC3 chr10 112356258 RNF13 chr3 149530594 Exonic hg19 NA BM834153 Out-of-frame Inter-chr q25.2 q25.1 107936 ChimerSeq ChiTaRs ChiTaRs WDR74-PAQR6 WDR74 chr11 62609281 PAQR6 chr1 156215712 Exonic hg19 NA DC337041 Out-of-frame Inter-chr q12.3 q22 107937 ChimerSeq ChiTaRs ChiTaRs MTCH1-OGG1 MTCH1 chr6 36945904 OGG1 chr3 9804352 Exonic hg19 NA BQ188595 Out-of-frame Inter-chr p21.2 p25.3 107938 ChimerSeq ChiTaRs ChiTaRs PNISR-QRSL1 PNISR chr6 99860699 QRSL1 chr6 107100080 Exonic hg19 NA CA841180 Out-of-frame Intra-chr q16.2 q21 107939 ChimerSeq ChiTaRs ChiTaRs CCDC149-MSH2 CCDC149 chr4 24914488 MSH2 chr2 47779148 Exonic hg19 NA BE710079 Out-of-frame Inter-chr p15.2 p21 Oncogene Tumor suppressor gene 107940 ChimerSeq ChiTaRs ChiTaRs TACSTD2-TACSTD2 TACSTD2 chr1 59041453 TACSTD2 chr1 59041123 Exonic hg19 NA AA531313 Out-of-frame Intra-chr p32.1 p32.1 107941 ChimerSeq ChiTaRs ChiTaRs NKIRAS1-NHSL1 NKIRAS1 chr3 23961043 NHSL1 chr6 138743836 Exonic hg19 NA AI278837 Out-of-frame Inter-chr p24.2 q24.1 107942 ChimerSeq ChiTaRs ChiTaRs FDPS-ATP13A2 FDPS chr1 155290456 ATP13A2 chr1 17316435 Exonic hg19 NA BF512311 Out-of-frame Intra-chr q22 p36.13 107943 ChimerSeq ChiTaRs ChiTaRs RYK-RYK RYK chr3 133894507 RYK chr3 133877049 Exonic hg19 NA BF767299 Out-of-frame Intra-chr q22.2 TK:Ryk q22.2 TK:Ryk 107944 ChimerSeq ChiTaRs ChiTaRs MAP3K7-MAP3K7 MAP3K7 chr6 91269915 MAP3K7 chr6 91269930 Exonic hg19 NA BF082237 Out-of-frame Intra-chr q15 STE:STE11 Oncogene q15 STE:STE11 Oncogene 107945 ChimerSeq ChiTaRs ChiTaRs SMEK2-UBC SMEK2 chr2 55843555 UBC chr12 125398109 Exonic hg19 NA DA283341 Out-of-frame Inter-chr q24.31 107946 ChimerSeq ChiTaRs ChiTaRs SCARB2-LOC100132247 SCARB2 chr4 77082809 LOC100132247 chr16 21848434 Exonic hg19 NA BF811415 Out-of-frame Inter-chr q21.1 107947 ChimerSeq ChiTaRs ChiTaRs DDB1-FOXP1 DDB1 chr11 61094307 FOXP1 chr3 71005366 Exonic hg19 NA H45478 Out-of-frame Inter-chr q12.2 p13 Oncogene Tumor suppressor gene Transcription factor 107948 ChimerSeq ChiTaRs ChiTaRs IER5L-RRAGC IER5L chr9 131940503 RRAGC chr1 39321382 Exonic hg19 NA BF127662 Out-of-frame Inter-chr q34.11 p34.3 107949 ChimerSeq ChiTaRs ChiTaRs PHF20L1-PGA3 PHF20L1 chr8 133858667 PGA3 chr11 60970987 Exonic hg19 NA DA968334 Out-of-frame Inter-chr q24.22 q12.2 107950 ChimerSeq ChiTaRs ChiTaRs APOB-ALB APOB chr2 21228146 ALB chr4 74279174 Exonic hg19 NA BG562874 Out-of-frame Inter-chr p24.1 q13.3 107951 ChimerSeq ChiTaRs ChiTaRs HSPA9-SLC35A2 HSPA9 chr5 137893629 SLC35A2 chrX 48762698 Exonic hg19 NA BM835588 Out-of-frame Inter-chr q31.2 p11.23 107952 ChimerSeq ChiTaRs ChiTaRs LEFTY1-INS-IGF2 LEFTY1 chr1 226111959 INS-IGF2 chr11 2153805 Exonic hg19 NA AF087859 Out-of-frame Inter-chr q42.12 Tumor suppressor gene p15.5 107953 ChimerSeq ChiTaRs ChiTaRs SIRT3-MED25 SIRT3 chr11 234946 MED25 chr19 50334666 Exonic hg19 NA BI036185 Out-of-frame Inter-chr p15.5 Tumor suppressor gene q13.33 107954 ChimerSeq ChiTaRs ChiTaRs CD82-LINC00338 CD82 chr11 44641328 LINC00338 chr17 75090379 Exonic hg19 NA AA576372 Out-of-frame Inter-chr p11.2 Tumor suppressor gene 107955 ChimerSeq ChiTaRs ChiTaRs CENPP-TTC3 CENPP chr9 95146904 TTC3 chr21 38574041 Exonic hg19 NA AW361429 Out-of-frame Inter-chr q22.31 q22.13 107956 ChimerSeq ChiTaRs ChiTaRs S100A13-AEBP2 S100A13 chr1 153604251 AEBP2 chr12 19592963 Exonic hg19 NA DA414442 Out-of-frame Inter-chr q21.3 p12.3 Transcription factor 107957 ChimerSeq ChiTaRs ChiTaRs TNNT2-CPSF7 TNNT2 chr1 201328204 CPSF7 chr11 61183821 Exonic hg19 NA AI015129 Out-of-frame Inter-chr q32.1 q12.2 107958 ChimerSeq ChiTaRs ChiTaRs RABGAP1L-OSER1 RABGAP1L chr1 174128795 OSER1 chr20 42826215 Exonic hg19 NA DB034206 Out-of-frame Inter-chr q25.1 q13.12 107959 ChimerSeq ChiTaRs ChiTaRs MTERFD2-TPM3 MTERFD2 chr2 242035725 TPM3 chr1 154145384 Exonic hg19 NA BF790588 Out-of-frame Inter-chr q21.3 107960 ChimerSeq ChiTaRs ChiTaRs RGS12-RGS12 RGS12 chr4 3424216 RGS12 chr4 3429549 Exonic hg19 NA AI672578 Out-of-frame Intra-chr p16.3 p16.3 107961 ChimerSeq ChiTaRs ChiTaRs INADL-NAP1L1 INADL chr1 62429377 NAP1L1 chr12 76453917 Exonic hg19 NA BQ960463 Out-of-frame Inter-chr q21.2 107962 ChimerSeq ChiTaRs ChiTaRs SMC6-FAM114A2 SMC6 chr2 17935234 FAM114A2 chr5 153409048 Exonic hg19 NA DB021139 5'UTR-CDS Inter-chr p24.2 q33.2 107963 ChimerSeq ChiTaRs ChiTaRs WAS-HIRA WAS chrX 48542782 HIRA chr22 19423216 Exonic hg19 NA CR987125 Out-of-frame Inter-chr p11.23 Oncogene q11.21 Tumor suppressor gene 107964 ChimerSeq ChiTaRs ChiTaRs PPP2R2A-SH3KBP1 PPP2R2A chr8 26227860 SH3KBP1 chrX 19553732 Exonic hg19 NA BM014893 Out-of-frame Inter-chr p21.2 p22.12 107965 ChimerSeq ChiTaRs ChiTaRs CLU-ADD3 CLU chr8 27472224 ADD3 chr10 111893082 Exonic hg19 NA BQ719076 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q25.1 107966 ChimerSeq ChiTaRs ChiTaRs ASAH1-SF3B3 ASAH1 chr8 17941605 SF3B3 chr16 70575572 Exonic hg19 NA DA755770 Out-of-frame Inter-chr p22 q22.1 107967 ChimerSeq ChiTaRs ChiTaRs PRPF18-CDC123 PRPF18 chr10 13642349 CDC123 chr10 12257737 Exonic hg19 NA BM798006 Out-of-frame Intra-chr p13 p14 107968 ChimerSeq ChiTaRs ChiTaRs MRFAP1-TACC2 MRFAP1 chr4 6644139 TACC2 chr10 124013892 Exonic hg19 NA AA232766 Out-of-frame Inter-chr p16.1 q26.13 107969 ChimerSeq ChiTaRs ChiTaRs EIF3E-GTSE1 EIF3E chr8 109260942 GTSE1 chr22 46693275 Exonic hg19 NA DA000478 Out-of-frame Inter-chr q23.1 q13.31 107970 ChimerSeq ChiTaRs ChiTaRs DDX21-CUTA DDX21 chr10 70742480 CUTA chr6 4864723 Exonic hg19 NA CN260624 Out-of-frame Inter-chr q22.1 107971 ChimerSeq ChiTaRs ChiTaRs NSUN5P1-FNDC3B NSUN5P1 chr7 75046066 FNDC3B chr3 172050891 Exonic hg19 NA BQ446022 Out-of-frame Inter-chr q11.23 q26.31 107972 ChimerSeq ChiTaRs ChiTaRs RIMS3-CCT7 RIMS3 chr1 41088797 CCT7 chr2 73474958 Exonic hg19 NA BE295614 Out-of-frame Inter-chr p34.2 p13.2 107973 ChimerSeq ChiTaRs ChiTaRs PHF17-RAB12 PHF17 chr4 129732553 RAB12 chr18 8624935 Exonic hg19 NA AK127824 5'UTR-CDS Inter-chr p11.22 107974 ChimerSeq ChiTaRs ChiTaRs YWHAG-LOC100507412 YWHAG chr7 75988306 LOC100507412 chr? 109516 Exonic hg19 NA BP312931 Out-of-frame Inter-chr q11.23 107975 ChimerSeq ChiTaRs ChiTaRs FCRL1-KATNA1 FCRL1 chr1 157789869 KATNA1 chr6 149924428 Exonic hg19 NA AA283968 Out-of-frame Inter-chr q23.1 q25.1 107976 ChimerSeq ChiTaRs ChiTaRs TRDMT1-NID2 TRDMT1 chr10 17199765 NID2 chr14 52485806 Exonic hg19 NA DA483206 Out-of-frame Inter-chr p13 q22.1 107977 ChimerSeq ChiTaRs ChiTaRs PGD-ESRP1 PGD chr1 10463154 ESRP1 chr8 95683825 Exonic hg19 NA DA454694 Out-of-frame Inter-chr p36.22 q22.1 Tumor suppressor gene 107978 ChimerSeq ChiTaRs ChiTaRs IGBP1-GLS IGBP1 chrX 69386176 GLS chr2 191785560 Exonic hg19 NA AI564468 Out-of-frame Inter-chr q13.1 q32.2 Tumor suppressor gene 107979 ChimerSeq ChiTaRs ChiTaRs DDAH2-TTC7B DDAH2 chr6 3028850 TTC7B chr14 91282519 Exonic hg19 NA BP229393 Out-of-frame Inter-chr q32.11 107980 ChimerSeq ChiTaRs ChiTaRs LOC100131564-FRMD4A LOC100131564 chr1 93805044 FRMD4A chr10 14017638 Exonic hg19 NA BF886376 Out-of-frame Inter-chr p13 107981 ChimerSeq ChiTaRs ChiTaRs LOC440944-FADS1 LOC440944 chr3 9426552 FADS1 chr11 61580785 Exonic hg19 NA AI937735 Out-of-frame Inter-chr q12.2 107982 ChimerSeq ChiTaRs ChiTaRs MCL1-GARS MCL1 chr1 150551776 GARS chr7 30671106 Exonic hg19 NA AI970290 Out-of-frame Inter-chr q21.2 Oncogene p14.3 107983 ChimerSeq ChiTaRs ChiTaRs SEPT7-ARPC3 2007_ 9_ 1_ chr7 35944104 ARPC3 chr12 110882874 Exonic hg19 NA BM833956 Out-of-frame Inter-chr q24.11 107984 ChimerSeq ChiTaRs ChiTaRs MRFAP1-DAGLB MRFAP1 chr4 6642847 DAGLB chr7 6509246 Exonic hg19 NA BF184327 Out-of-frame Inter-chr p16.1 p22.1 107985 ChimerSeq ChiTaRs ChiTaRs HS3ST1-EXD2 HS3ST1 chr4 11430539 EXD2 chr14 69676138 Exonic hg19 NA DA418439 Out-of-frame Inter-chr p15.33 q24.1 107986 ChimerSeq ChiTaRs ChiTaRs PAIP2B-YEATS2 PAIP2B chr2 71413058 YEATS2 chr3 183529985 Exonic hg19 NA H19903 Out-of-frame Inter-chr p13.3 q27.1 107987 ChimerSeq ChiTaRs ChiTaRs HLA-E-DSCR3 HLA-E chr6 1793391 DSCR3 chr21 38597247 Exonic hg19 NA AW337803 Out-of-frame Inter-chr q22.13 107988 ChimerSeq ChiTaRs ChiTaRs ANP32B-S100A10 ANP32B chr9 100777825 S100A10 chr1 151955667 Exonic hg19 NA BE122679 Out-of-frame Inter-chr q22.33 q21.3 107989 ChimerSeq ChiTaRs ChiTaRs ZNF655-NUDCD3 ZNF655 chr7 99158320 NUDCD3 chr7 44444115 Exonic hg19 NA DA266922 Out-of-frame Intra-chr q22.1 Transcription factor p13 KB 107990 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-COL12A1 INS-IGF2 chr11 2158516 COL12A1 chr6 75904593 Exonic hg19 NA BP376743 Out-of-frame Inter-chr p15.5 q14.1 Oncogene 107991 ChimerSeq ChiTaRs ChiTaRs SNHG1-LDB3 SNHG1 chr11 62622551 LDB3 chr10 88428264 Exonic hg19 NA DB214565 Out-of-frame Inter-chr q12.3 q23.2 107992 ChimerSeq ChiTaRs ChiTaRs PTPN12-HSP90AA1 PTPN12 chr7 77256353 HSP90AA1 chr14 102551293 Exonic hg19 NA CN395126 Out-of-frame Inter-chr q11.23 Tumor suppressor gene q32.31 Oncogene 107993 ChimerSeq ChiTaRs ChiTaRs RBM3-F3 RBM3 chrX 48436672 F3 chr1 94995621 Exonic hg19 NA BU676293 Out-of-frame Inter-chr p11.23 p21.3 107994 ChimerSeq ChiTaRs ChiTaRs BCYRN1-BAG1 BCYRN1 chrX 70753170 BAG1 chr9 33253223 Exonic hg19 NA BQ072717 Out-of-frame Inter-chr p21 p13.3 107995 ChimerSeq ChiTaRs ChiTaRs RPS6KA3-ACTR3 RPS6KA3 chrX 20171963 ACTR3 chr2 114715521 Exonic hg19 NA CA843526 Out-of-frame Inter-chr p22.12 q14.1 107996 ChimerSeq ChiTaRs ChiTaRs GRINA-SEPW1 GRINA chr8 145065925 SEPW1 chr19 48287626 Exonic hg19 NA BF945184 Out-of-frame Inter-chr q24.3 107997 ChimerSeq ChiTaRs ChiTaRs TTC14-PTER TTC14 chr3 180327792 PTER chr10 16547017 Exonic hg19 NA AK074095 Out-of-frame Inter-chr q26.33 p13 107998 ChimerSeq ChiTaRs ChiTaRs MIR548O2-RPL36A-HNRNPH2 MIR548O2 chr8 29927310 RPL36A-HNRNPH2 chrX 100663250 Exonic hg19 NA T06265 Out-of-frame Inter-chr q11.23 q22.1 107999 ChimerSeq ChiTaRs ChiTaRs OLFML2A-ESYT2 OLFML2A chr9 127549517 ESYT2 chr7 158523937 Exonic hg19 NA AA902521 CDS-3'UTR Inter-chr q33.3 q36.3 108000 ChimerSeq ChiTaRs ChiTaRs GPR75-ASB3-SF3A1 GPR75-ASB3 chr2 54045310 SF3A1 chr22 30742490 Exonic hg19 NA AW193659 Out-of-frame Inter-chr p16.2 q12.2 108001 ChimerSeq ChiTaRs ChiTaRs ACE2-CIRH1A ACE2 chrX 15619083 CIRH1A chr16 69167438 Exonic hg19 NA DB034649 Out-of-frame Inter-chr p22.2 108002 ChimerSeq ChiTaRs ChiTaRs CERCAM-TNFRSF1A CERCAM chr9 131199626 TNFRSF1A chr12 6437964 Exonic hg19 NA W02761 Out-of-frame Inter-chr q34.11 p13.31 108003 ChimerSeq ChiTaRs ChiTaRs DNAH11-MICAL2 DNAH11 chr7 21940717 MICAL2 chr11 12238587 Exonic hg19 NA AW664742 Out-of-frame Inter-chr p15.3 p15.3 108004 ChimerSeq ChiTaRs ChiTaRs ENSA-ABHD12 ENSA chr1 150601972 ABHD12 chr20 25281051 Exonic hg19 NA BQ637635 Out-of-frame Inter-chr q21.3 p11.21 108005 ChimerSeq ChiTaRs ChiTaRs MATR3-PRKCH MATR3 chr5 138648360 PRKCH chr14 61782413 Exonic hg19 NA CV382562 Out-of-frame Inter-chr q31.2 q23.1 108006 ChimerSeq ChiTaRs ChiTaRs HLA-E-PPFIBP1 HLA-E chr6 1793080 PPFIBP1 chr12 27848319 Exonic hg19 NA BM559993 Out-of-frame Inter-chr p11.23 108007 ChimerSeq ChiTaRs ChiTaRs LOC442459-HSP90AA1 LOC442459 chrX 98950941 HSP90AA1 chr14 102548583 Exonic hg19 NA AW796559 Out-of-frame Inter-chr q32.31 Oncogene 108008 ChimerSeq ChiTaRs ChiTaRs TRAF6-GANAB TRAF6 chr11 36531822 GANAB chr11 62406560 Exonic hg19 NA DB067719 Out-of-frame Intra-chr p12 q12.3 Tumor suppressor gene 108009 ChimerSeq ChiTaRs ChiTaRs SLC12A9-EGFR SLC12A9 chr7 100463764 EGFR chr7 55270275 Exonic hg19 NA BF736842 Out-of-frame Intra-chr q22.1 p11.2 TK:EGFR Oncogene 108010 ChimerSeq ChiTaRs ChiTaRs SLAMF9-ALG12 SLAMF9 chr1 159924010 ALG12 chr22 50296864 Exonic hg19 NA AF311904 Out-of-frame Inter-chr q23.2 q13.33 108011 ChimerSeq ChiTaRs ChiTaRs HDAC8-NDUFS2 HDAC8 chrX 71694589 NDUFS2 chr1 161179681 Exonic hg19 NA BG979781 Out-of-frame Inter-chr q13.1 q23.3 108012 ChimerSeq ChiTaRs ChiTaRs MBOAT1-RPL37 MBOAT1 chr6 20125119 RPL37 chr5 40832556 Exonic hg19 NA AJ705329 Out-of-frame Inter-chr p22.3 p13.1 108013 ChimerSeq ChiTaRs ChiTaRs CDYL-CDYL CDYL chr6 4892615 CDYL chr6 4891945 Exonic hg19 NA BF380091 Out-of-frame Intra-chr p25.1 p25.1 108014 ChimerSeq ChiTaRs ChiTaRs ATHL1-WBP2 ATHL1 chr11 293409 WBP2 chr17 73841824 Exonic hg19 NA BC032399 Out-of-frame Inter-chr q25.1 108015 ChimerSeq ChiTaRs ChiTaRs TMEM245-GOLM1 TMEM245 chr9 111782492 GOLM1 chr9 88641056 Exonic hg19 NA U25276 Out-of-frame Intra-chr q31.3 q21.33 108016 ChimerSeq ChiTaRs ChiTaRs IFT57-CD200R1L IFT57 chr3 107885758 CD200R1L chr3 112541750 Exonic hg19 NA CA312916 Out-of-frame Intra-chr q13.13 q13.2 108017 ChimerSeq ChiTaRs ChiTaRs SDCBP-RAB7A SDCBP chr8 59495081 RAB7A chr3 128445008 Exonic hg19 NA DB200033 Out-of-frame Inter-chr q12.1 q21.3 Tumor suppressor gene 108018 ChimerSeq ChiTaRs ChiTaRs ZSWIM6-ERP29 ZSWIM6 chr5 60840893 ERP29 chr12 112451264 Exonic hg19 NA DN998968 Out-of-frame Inter-chr q12.1 q24.13 108019 ChimerSeq ChiTaRs ChiTaRs CMYA5-RPL23A CMYA5 chr5 79034220 RPL23A chr17 27047863 Exonic hg19 NA BP259075 Out-of-frame Inter-chr q14.1 q11.2 108020 ChimerSeq ChiTaRs ChiTaRs FYN-COL6A3 FYN chr6 111982765 COL6A3 chr2 238277525 Exonic hg19 NA AI952526 Out-of-frame Inter-chr q21 TK:Src q37.3 108021 ChimerSeq ChiTaRs ChiTaRs COL1A2-SACS COL1A2 chr7 94057637 SACS chr13 23903200 Exonic hg19 NA AA417676 Out-of-frame Inter-chr q21.3 q12.12 108022 ChimerSeq ChiTaRs ChiTaRs RNF4-DCTD RNF4 chr4 2470985 DCTD chr4 183812203 Exonic hg19 NA BM554139 5'UTR-3'UTR Intra-chr p16.3 q35.1 108023 ChimerSeq ChiTaRs ChiTaRs AIM1-HELLS AIM1 chr6 106978190 HELLS chr10 96347986 Exonic hg19 NA AU136737 Out-of-frame Inter-chr q23.33 108024 ChimerSeq ChiTaRs ChiTaRs SERBP1-SPARC SERBP1 chr1 67878848 SPARC chr5 151042141 Exonic hg19 NA CB141411 Out-of-frame Inter-chr p31.3 q33.1 Tumor suppressor gene 108025 ChimerSeq ChiTaRs ChiTaRs COBLL1-SMAD4 COBLL1 chr2 165697755 SMAD4 chr18 48581149 Exonic hg19 NA DA017543 Out-of-frame Inter-chr q24.3 q21.2 Oncogene Tumor suppressor gene Transcription factor 108026 ChimerSeq ChiTaRs ChiTaRs SLC25A38-HPRT1 SLC25A38 chr3 39433380 HPRT1 chrX 133609267 Exonic hg19 NA BE180729 Out-of-frame Inter-chr p22.1 q26.2 108027 ChimerSeq ChiTaRs ChiTaRs CCDC141-PALM2-AKAP2 CCDC141 chr2 179914735 PALM2-AKAP2 chr9 112918597 Exonic hg19 NA DA587512 Out-of-frame Inter-chr q31.2 q31.3 108028 ChimerSeq ChiTaRs ChiTaRs NUCKS1-ASRGL1 NUCKS1 chr1 205688697 ASRGL1 chr11 62124549 Exonic hg19 NA BQ343733 Out-of-frame Inter-chr q32.1 q12.3 108029 ChimerSeq ChiTaRs ChiTaRs HLA-E-MALL HLA-E chr6 1793088 MALL chr2 110842317 Exonic hg19 NA BE904936 Out-of-frame Inter-chr q13 108030 ChimerSeq ChiTaRs ChiTaRs TTTY14-MEGF11 TTTY14 chrY 21153245 MEGF11 chr15 66189419 Exonic hg19 NA BF529317 Out-of-frame Inter-chr q11.222 q22.31 108031 ChimerSeq ChiTaRs ChiTaRs GIGYF1-GZMB GIGYF1 chr7 100277413 GZMB chr14 25101096 Exonic hg19 NA CF528869 Out-of-frame Inter-chr q22.1 q12 108032 ChimerSeq ChiTaRs ChiTaRs PNPLA1-GLIS1 PNPLA1 chr6 36275488 GLIS1 chr1 54188216 Exonic hg19 NA BG218678 Out-of-frame Inter-chr p21.31 p32.3 Transcription factor 108033 ChimerSeq ChiTaRs ChiTaRs BIRC6-CCDC84 BIRC6 chr2 32787851 CCDC84 chr11 118886422 Exonic hg19 NA BE561769 Out-of-frame Inter-chr p22.3 108034 ChimerSeq ChiTaRs ChiTaRs SNIP1-COL1A2 SNIP1 chr1 38019891 COL1A2 chr7 94057673 Exonic hg19 NA AU117270 Out-of-frame Inter-chr p34.3 q21.3 108035 ChimerSeq ChiTaRs ChiTaRs PHC3-NOVA1 PHC3 chr3 169899524 NOVA1 chr14 26949251 Exonic hg19 NA DA101766 Out-of-frame Inter-chr q26.2 Tumor suppressor gene q12 108036 ChimerSeq ChiTaRs ChiTaRs NRXN1-NRXN1 NRXN1 chr2 51259252 NRXN1 chr2 50149115 Exonic hg19 NA BX487736 Out-of-frame Intra-chr p16.3 p16.3 108037 ChimerSeq ChiTaRs ChiTaRs ENSA-GPR107 ENSA chr1 150601569 GPR107 chr9 132900803 Exonic hg19 NA DB021778 Out-of-frame Inter-chr q21.3 q34.11 108038 ChimerSeq ChiTaRs ChiTaRs STARD3NL-PAPD7 STARD3NL chr7 38218022 PAPD7 chr5 6737621 Exonic hg19 NA AK289857 5'UTR-5'UTR Inter-chr p14.1 p15.31 108039 ChimerSeq ChiTaRs ChiTaRs VANGL1-PARP12 VANGL1 chr1 116194106 PARP12 chr7 139724646 Exonic hg19 NA DR423509 Out-of-frame Inter-chr p13.1 q34 108040 ChimerSeq ChiTaRs ChiTaRs ADCY2-LARP1B ADCY2 chr1 152005172 LARP1B chr4 129029633 Exonic hg19 NA AA303012 Out-of-frame Inter-chr p15.31 q28.2 108041 ChimerSeq ChiTaRs ChiTaRs LCN1-HECA LCN1 chr9 138416738 HECA chr6 139501807 Exonic hg19 NA CD723346 Out-of-frame Inter-chr q34.3 q24.1 Tumor suppressor gene 108042 ChimerSeq ChiTaRs ChiTaRs NEURL1B-RPL6 NEURL1B chr5 172083740 RPL6 chr12 112843660 Exonic hg19 NA BG531737 Out-of-frame Inter-chr q35.1 q24.13 108043 ChimerSeq ChiTaRs ChiTaRs CEP85L-EEF1A1 CEP85L chr6 118949774 EEF1A1 chr6 74228830 Exonic hg19 NA DA091240 Out-of-frame Intra-chr q22.31 q13 Tumor suppressor gene 108044 ChimerSeq ChiTaRs ChiTaRs CCDC69-UGDH CCDC69 chr5 150581246 UGDH chr4 39501148 Exonic hg19 NA BC013053 Out-of-frame Inter-chr q33.1 p14 108045 ChimerSeq ChiTaRs ChiTaRs CDC42SE1-KRAS CDC42SE1 chr1 151024410 KRAS chr12 25361365 Exonic hg19 NA BE150903 Out-of-frame Inter-chr q21.3 p12.1 Oncogene 108046 ChimerSeq ChiTaRs ChiTaRs NPHP1-PARG NPHP1 chr2 110962588 PARG chr10 51363311 Exonic hg19 NA DA809283 Out-of-frame Inter-chr q13 q11.23 108047 ChimerSeq ChiTaRs ChiTaRs GSTM2-RAN GSTM2 chr1 110217567 RAN chr12 131359137 Exonic hg19 NA BU855095 Out-of-frame Inter-chr p13.3 q24.33 108048 ChimerSeq ChiTaRs ChiTaRs PLP1-GNPAT PLP1 chrX 103031891 GNPAT chr1 231410993 Exonic hg19 NA DA174856 Out-of-frame Inter-chr q22.2 q42.2 108049 ChimerSeq ChiTaRs ChiTaRs SEMA6A-DLG5 SEMA6A chr5 115782169 DLG5 chr10 79572329 Exonic hg19 NA BF990526 Out-of-frame Inter-chr q23.1 q22.3 108050 ChimerSeq ChiTaRs ChiTaRs NPM1-PTMA NPM1 chr5 170818771 PTMA chr2 232576618 Exonic hg19 NA BG255268 Out-of-frame Inter-chr q35.1 Oncogene Tumor suppressor gene q37.1 108051 ChimerSeq ChiTaRs ChiTaRs PCMTD1-DCDC2 PCMTD1 chr8 52773809 DCDC2 chr6 24357883 Exonic hg19 NA BG750306 Out-of-frame Inter-chr q11.23 p22.3 Tumor suppressor gene 108052 ChimerSeq ChiTaRs ChiTaRs LDHA-MEST LDHA chr11 18429180 MEST chr7 130145346 Exonic hg19 NA BG179712 Out-of-frame Inter-chr p15.1 q32.2 108053 ChimerSeq ChiTaRs ChiTaRs MRPL14-ZBTB42 MRPL14 chr6 44081640 ZBTB42 chr14 105269230 Exonic hg19 NA BF063279 Out-of-frame Inter-chr p21.1 q32.33 Transcription factor 108054 ChimerSeq ChiTaRs ChiTaRs S100A4-CLK1 S100A4 chr1 153518282 CLK1 chr2 201726085 Exonic hg19 NA DA581660 5'UTR-CDS Inter-chr q21.3 q33.1 CMGC:CLK 108055 ChimerSeq ChiTaRs ChiTaRs GAD1-ALDOC GAD1 chr2 171675153 ALDOC chr17 26901972 Exonic hg19 NA DA078791 Out-of-frame Inter-chr q31.1 q11.2 108056 ChimerSeq ChiTaRs ChiTaRs FAM3C-SERPINE2 FAM3C chr7 120990268 SERPINE2 chr2 224862936 Exonic hg19 NA W30683 Out-of-frame Inter-chr q31.31 q36.1 108057 ChimerSeq ChiTaRs ChiTaRs OSCP1-BMS1 OSCP1 chr1 36884830 BMS1 chr10 43287073 Exonic hg19 NA DB080871 Out-of-frame Inter-chr p34.3 Tumor suppressor gene q11.21 108058 ChimerSeq ChiTaRs ChiTaRs NGFRAP1-HSPA5 NGFRAP1 chrX 102633000 HSPA5 chr9 128002544 Exonic hg19 NA BU156585 Out-of-frame Inter-chr q33.3 108059 ChimerSeq ChiTaRs ChiTaRs CYR61-COL6A1 CYR61 chr1 86049388 COL6A1 chr21 47424199 Exonic hg19 NA CA420740 Out-of-frame Inter-chr p22.3 q22.3 108060 ChimerSeq ChiTaRs ChiTaRs MSRA-SOAT1 MSRA chr8 10285875 SOAT1 chr1 179311247 Exonic hg19 NA CB529586 Out-of-frame Inter-chr p23.1 q25.2 108061 ChimerSeq ChiTaRs ChiTaRs KIAA0141-MAGI1 KIAA0141 chr5 141318225 MAGI1 chr3 65438976 Exonic hg19 NA BQ367408 Out-of-frame Inter-chr q31.3 Oncogene 108062 ChimerSeq ChiTaRs ChiTaRs RELL1-LGALS8 RELL1 chr4 37687998 LGALS8 chr1 236706060 Exonic hg19 NA DA386951 5'UTR-CDS Inter-chr p14 q43 108063 ChimerSeq ChiTaRs ChiTaRs CD99L2-DENR CD99L2 chrX 149936508 DENR chr12 123254604 Exonic hg19 NA T35084 Out-of-frame Inter-chr q28 q24.31 108064 ChimerSeq ChiTaRs ChiTaRs PPIG-PPIG PPIG chr2 170493273 PPIG chr2 170493296 Exonic hg19 NA BU616569 Out-of-frame Intra-chr q31.1 q31.1 108065 ChimerSeq ChiTaRs ChiTaRs RBM8A-DYNLRB1 RBM8A chr1 145510258 DYNLRB1 chr20 33114114 Exonic hg19 NA CR736380 Out-of-frame Inter-chr q21.1 q11.22 108066 ChimerSeq ChiTaRs ChiTaRs SH3D21-PRMT1 SH3D21 chr1 36790212 PRMT1 chr19 50191439 Exonic hg19 NA BE717907 Out-of-frame Inter-chr p34.3 q13.33 108067 ChimerSeq ChiTaRs ChiTaRs CD99L2-BRD4 CD99L2 chrX 149935064 BRD4 chr19 15355087 Exonic hg19 NA BU630212 Out-of-frame Inter-chr q28 p13.12 Atypical:BRD 108068 ChimerSeq ChiTaRs ChiTaRs FN1-LYN FN1 chr2 216249639 LYN chr8 56922700 Exonic hg19 NA CN419543 Out-of-frame Inter-chr q35 Oncogene q12.1 TK:Src 108069 ChimerSeq ChiTaRs ChiTaRs AFF1-UBE2D3 AFF1 chr4 87869724 UBE2D3 chr4 103723717 Exonic hg19 NA AA057480 5'UTR-CDS Intra-chr q21.3 Oncogene q24 108070 ChimerSeq ChiTaRs ChiTaRs HLA-DQB1-CORO1C HLA-DQB1 chr6 32629177 CORO1C chr12 109039086 Exonic hg19 NA CA306961 Out-of-frame Inter-chr q24.11 108071 ChimerSeq ChiTaRs ChiTaRs HTATSF1-GAS6 HTATSF1 chrX 135586281 GAS6 chr13 114525100 Exonic hg19 NA BM689183 Out-of-frame Inter-chr q26.3 q34 Oncogene 108072 ChimerSeq ChiTaRs ChiTaRs H1FX-HEXIM1 H1FX chr3 129035118 HEXIM1 chr17 43227547 Exonic hg19 NA AV705114 Out-of-frame Inter-chr q21.3 q21.31 108073 ChimerSeq ChiTaRs ChiTaRs PSAP-HLA-DPA1 PSAP chr10 73576222 HLA-DPA1 chr6 4517338 Exonic hg19 NA CD370612 Out-of-frame Inter-chr q22.1 108074 ChimerSeq ChiTaRs ChiTaRs NRN1-THBS3 NRN1 chr6 5998601 THBS3 chr1 155167984 Exonic hg19 NA BQ014617 Out-of-frame Inter-chr p25.1 q22 108075 ChimerSeq ChiTaRs ChiTaRs CDK6-ACHE CDK6 chr7 92331104 ACHE chr7 100490125 Exonic hg19 NA R96128 Out-of-frame Intra-chr q21.2 CMGC:CDK Oncogene Tumor suppressor gene q22.1 Tumor suppressor gene 108076 ChimerSeq ChiTaRs ChiTaRs USP54-ITGA3 USP54 chr10 75276770 ITGA3 chr17 48167434 Exonic hg19 NA BF807982 Out-of-frame Inter-chr q22.2 q21.33 108077 ChimerSeq ChiTaRs ChiTaRs FGD2-CD74 FGD2 chr6 36976780 CD74 chr5 149784027 Exonic hg19 NA DA944565 Out-of-frame Inter-chr p21.2 q33.1 108078 ChimerSeq ChiTaRs ChiTaRs MUC3A-SET MUC3A chr7 100610997 SET chr9 131456921 Exonic hg19 NA BF084337 Out-of-frame Inter-chr q22.1 q34.11 108079 ChimerSeq ChiTaRs ChiTaRs LOC254128-PCNA LOC254128 chr2 122485899 PCNA chr20 5096183 Exonic hg19 NA BU632566 Out-of-frame Inter-chr p12.3 108080 ChimerSeq ChiTaRs ChiTaRs ACTB-LOC100507412 ACTB chr7 5570232 LOC100507412 chr? 110070 Exonic hg19 NA BP371810 3'UTR-5'UTR Inter-chr p22.1 108081 ChimerSeq ChiTaRs ChiTaRs HBG2-SERPINH1 HBG2 chr11 5634132 SERPINH1 chr11 75273298 Exonic hg19 NA DA730707 Out-of-frame Intra-chr p15.4 q13.5 108082 ChimerSeq ChiTaRs ChiTaRs HBG2-TNKS2 HBG2 chr11 5526879 TNKS2 chr10 93566866 Exonic hg19 NA BF240319 Out-of-frame Inter-chr p15.4 q23.32 108083 ChimerSeq ChiTaRs ChiTaRs TUBB-SCD TUBB chr6 2025100 SCD chr10 102120708 Exonic hg19 NA BE695571 Out-of-frame Inter-chr q24.31 108084 ChimerSeq ChiTaRs ChiTaRs C10orf32-TNS4 C10orf32 chr10 104622813 TNS4 chr17 38632561 Exonic hg19 NA BG739983 Out-of-frame Inter-chr q21.2 108085 ChimerSeq ChiTaRs ChiTaRs RAD1-EHD2 RAD1 chr5 34915864 EHD2 chr19 48245349 Exonic hg19 NA BG496857 Out-of-frame Inter-chr p13.2 q13.33 108086 ChimerSeq ChiTaRs ChiTaRs PMPCB-PCBD2 PMPCB chr7 102967760 PCBD2 chr5 134262570 Exonic hg19 NA BE709389 Out-of-frame Inter-chr q22.1 q31.1 108087 ChimerSeq ChiTaRs ChiTaRs RGS22-LDHC RGS22 chr8 100999854 LDHC chr11 18472647 Exonic hg19 NA BU569321 Out-of-frame Inter-chr q22.2 p15.1 108088 ChimerSeq ChiTaRs ChiTaRs S100A6-AP2A1 S100A6 chr1 153507176 AP2A1 chr19 50305000 Exonic hg19 NA AI913893 Out-of-frame Inter-chr q21.3 q13.33 108089 ChimerSeq ChiTaRs ChiTaRs ATP2C1-SYT17 ATP2C1 chr3 130613182 SYT17 chr16 19191712 Exonic hg19 NA BE792646 5'UTR-CDS Inter-chr q22.1 p12.3 108090 ChimerSeq ChiTaRs ChiTaRs TIMM17A-RTN4 TIMM17A chr1 201924680 RTN4 chr2 55199919 Exonic hg19 NA CK001143 CDS-3'UTR Inter-chr q32.1 p16.1 Tumor suppressor gene 108091 ChimerSeq ChiTaRs ChiTaRs SH3PXD2A-TSHZ3 SH3PXD2A chr10 105426976 TSHZ3 chr19 31799554 Exonic hg19 NA BX098920 Out-of-frame Inter-chr q24.33 q12 Transcription factor 108092 ChimerSeq ChiTaRs ChiTaRs EEF1A1-TPM3 EEF1A1 chr6 74229769 TPM3 chr1 154129884 Exonic hg19 NA BE787198 Out-of-frame Inter-chr q13 Tumor suppressor gene q21.3 108093 ChimerSeq ChiTaRs ChiTaRs RUSC1-MT1X RUSC1 chr1 155296463 MT1X chr16 56717870 Exonic hg19 NA BF752844 Out-of-frame Inter-chr q22 q13 108094 ChimerSeq ChiTaRs ChiTaRs AKIP1-F2R AKIP1 chr11 8941118 F2R chr5 76031271 Exonic hg19 NA BX648821 Out-of-frame Inter-chr p15.4 q13.3 108095 ChimerSeq ChiTaRs ChiTaRs RPL7A-ST7-AS1 RPL7A chr9 136217768 ST7-AS1 chr7 116593398 Exonic hg19 NA DA868683 Out-of-frame Inter-chr q31.2 Tumor suppressor gene 108096 ChimerSeq ChiTaRs ChiTaRs SYNE1-AOX2P SYNE1 chr6 152623259 AOX2P chr2 201647103 Exonic hg19 NA DA821248 Out-of-frame Inter-chr q25.2 Oncogene q33.1 108097 ChimerSeq ChiTaRs ChiTaRs ZNF711-GNAO1 ZNF711 chrX 84499122 GNAO1 chr16 56225702 Exonic hg19 NA DA491290 Out-of-frame Inter-chr q21.1 Transcription factor q13 108098 ChimerSeq ChiTaRs ChiTaRs ATP6V0E1-OXR1 ATP6V0E1 chr5 172410919 OXR1 chr8 107708953 Exonic hg19 NA BX474197 Out-of-frame Inter-chr q35.1 q23.1 108099 ChimerSeq ChiTaRs ChiTaRs C2orf61-GDI2 C2orf61 chr2 47403650 GDI2 chr10 5838773 Exonic hg19 NA DA514557 Out-of-frame Inter-chr p15.1 108100 ChimerSeq ChiTaRs ChiTaRs SERPING1-ILF3 SERPING1 chr11 57381871 ILF3 chr19 10791709 Exonic hg19 NA AA368909 Out-of-frame Inter-chr q12.1 p13.2 108101 ChimerSeq ChiTaRs ChiTaRs MOSPD2-SND1 MOSPD2 chrX 14891882 SND1 chr7 127326665 Exonic hg19 NA CN305750 Out-of-frame Inter-chr p22.2 q32.1 108102 ChimerSeq ChiTaRs ChiTaRs ATP5C1-C10orf12 ATP5C1 chr10 7849762 C10orf12 chr10 98740656 Exonic hg19 NA N21155 3'UTR-5'UTR Intra-chr p14 108103 ChimerSeq ChiTaRs ChiTaRs FXR1-KLHL24 FXR1 chr3 180632785 KLHL24 chr3 183361265 Exonic hg19 NA DA402481 Out-of-frame Intra-chr q26.33 q27.1 Seq+ 108104 ChimerSeq ChiTaRs ChiTaRs GNL3-ARHGAP9 GNL3 chr3 52724838 ARHGAP9 chr12 57881851 Exonic hg19 NA DA545728 Out-of-frame Inter-chr p21.1 q13.3 108105 ChimerSeq ChiTaRs ChiTaRs PNRC1-EZR PNRC1 chr6 89790532 EZR chr6 159188485 Exonic hg19 NA BM761260 Out-of-frame Intra-chr q15 q25.3 108106 ChimerSeq ChiTaRs ChiTaRs S100A8-ANXA11 S100A8 chr1 153362665 ANXA11 chr10 81915548 Exonic hg19 NA BQ336317 Out-of-frame Inter-chr q21.3 q22.3 108107 ChimerSeq ChiTaRs ChiTaRs ZNF672-NME7 ZNF672 chr1 249145545 NME7 chr1 169308938 Exonic hg19 NA BF913184 Out-of-frame Intra-chr q44 Transcription factor q24.2 108108 ChimerSeq ChiTaRs ChiTaRs CSMD1-UBQLN1 CSMD1 chr8 4043152 UBQLN1 chr9 86300982 Exonic hg19 NA M85870 Out-of-frame Inter-chr p23.2 Tumor suppressor gene q21.32 108109 ChimerSeq ChiTaRs ChiTaRs WDR74-SRGAP2 WDR74 chr11 62609281 SRGAP2 chr1 206634773 Exonic hg19 NA DA154669 Out-of-frame Inter-chr q12.3 q32.1 Tumor suppressor gene 108110 ChimerSeq ChiTaRs ChiTaRs HDLBP-UNC13A HDLBP chr2 242202250 UNC13A chr19 17714580 Exonic hg19 NA CN298952 Out-of-frame Inter-chr q37.3 p13.11 108111 ChimerSeq ChiTaRs ChiTaRs UNC5C-RAP1GDS1 UNC5C chr4 96470121 RAP1GDS1 chr4 99313101 Exonic hg19 NA DA588240 Out-of-frame Intra-chr q22.3 Tumor suppressor gene q23 108112 ChimerSeq ChiTaRs ChiTaRs DDB1-ZNF408 DDB1 chr11 61084385 ZNF408 chr11 46722587 Exonic hg19 NA DA870794 Out-of-frame Intra-chr q12.2 p11.2 Transcription factor 108113 ChimerSeq ChiTaRs ChiTaRs SH3KBP1-DMD SH3KBP1 chrX 19650032 DMD chrX 31138471 Exonic hg19 NA BI060372 Out-of-frame Intra-chr p22.12 p21.1 Tumor suppressor gene 108114 ChimerSeq ChiTaRs ChiTaRs DGUOK-CFLAR DGUOK chr2 74186073 CFLAR chr2 201994640 Exonic hg19 NA AI351551 Out-of-frame Intra-chr p13.1 q33.1 108115 ChimerSeq ChiTaRs ChiTaRs USP45-THOC1 USP45 chr6 99958107 THOC1 chr18 247849 Exonic hg19 NA AK310643 Out-of-frame Inter-chr q16.2 p11.32 108116 ChimerSeq ChiTaRs ChiTaRs NEK10-QKI NEK10 chr3 27262344 QKI chr6 163836232 Exonic hg19 NA AF142421 Out-of-frame Inter-chr p24.1 Other:NEK q26 108117 ChimerSeq ChiTaRs ChiTaRs SGCB-THBS1 SGCB chr4 52890180 THBS1 chr15 39885807 Exonic hg19 NA CA446529 Out-of-frame Inter-chr q12 q14 Oncogene Tumor suppressor gene 108118 ChimerSeq ChiTaRs ChiTaRs AHCYL2-YME1L1 AHCYL2 chr7 129050272 YME1L1 chr10 27409367 Exonic hg19 NA AK309708 Out-of-frame Inter-chr q32.1 p12.1 108119 ChimerSeq ChiTaRs ChiTaRs CDCP1-KPNB1 CDCP1 chr3 45127475 KPNB1 chr17 45759842 Exonic hg19 NA AK026028 Out-of-frame Inter-chr p21.31 Tumor suppressor gene q21.32 108120 ChimerSeq ChiTaRs ChiTaRs PSMD2-HDAC10 PSMD2 chr3 184018173 HDAC10 chr22 50683612 Exonic hg19 NA CA336827 CDS-3'UTR Inter-chr q27.1 q13.33 108121 ChimerSeq ChiTaRs ChiTaRs CLDN18-UACA CLDN18 chr3 137752491 UACA chr15 71043414 Exonic hg19 NA BM854674 Out-of-frame Inter-chr q22.3 q23 108122 ChimerSeq ChiTaRs ChiTaRs DAB1-LIMCH1 DAB1 chr1 59002283 LIMCH1 chr4 41700535 Exonic hg19 NA BE173819 Out-of-frame Inter-chr p32.1 p13 108123 ChimerSeq ChiTaRs ChiTaRs OLFML2A-EIF5B OLFML2A chr9 127574347 EIF5B chr2 99984997 Exonic hg19 NA BM727161 Out-of-frame Inter-chr q33.3 q11.2 108124 ChimerSeq ChiTaRs ChiTaRs CHMP3-CYP27A1 CHMP3 chr2 86756441 CYP27A1 chr2 219679674 Exonic hg19 NA BF354800 Out-of-frame Intra-chr p11.2 q35 108125 ChimerSeq ChiTaRs ChiTaRs RNF220-SAP30BP RNF220 chr1 45111132 SAP30BP chr17 73702417 Exonic hg19 NA BQ219029 Out-of-frame Inter-chr p34.1 q25.1 108126 ChimerSeq ChiTaRs ChiTaRs DOCK7-IQCG DOCK7 chr1 62979445 IQCG chr3 197677087 Exonic hg19 NA CA776035 Out-of-frame Inter-chr p31.3 q29 108127 ChimerSeq ChiTaRs ChiTaRs MIR548N-FAH MIR548N chr2 179315368 FAH chr15 80460620 Exonic hg19 NA BU956000 Out-of-frame Inter-chr p14.2 q25.1 108128 ChimerSeq ChiTaRs ChiTaRs RGPD2-IARS RGPD2 chr2 88124737 IARS chr9 95040178 Exonic hg19 NA BQ362438 Out-of-frame Inter-chr p11.2 q22.31 108129 ChimerSeq ChiTaRs ChiTaRs ARID5B-RPL13 ARID5B chr10 63854091 RPL13 chr16 89629340 Exonic hg19 NA DW426670 Out-of-frame Inter-chr q21.2 Transcription factor q24.3 108130 ChimerSeq ChiTaRs ChiTaRs MRPL44-C2 MRPL44 chr2 224832425 C2 chr6 3234793 Exonic hg19 NA CD367463 Out-of-frame Inter-chr q36.1 p21.33 108131 ChimerSeq ChiTaRs ChiTaRs EIF3I-HDAC1 EIF3I chr1 32697203 HDAC1 chr1 32786061 Exonic hg19 NA AI682532 Out-of-frame Intra-chr p35.2 p35.2 Tumor suppressor gene 108132 ChimerSeq ChiTaRs ChiTaRs LRPAP1-HNRNPM LRPAP1 chr4 3520639 HNRNPM chr19 8551251 Exonic hg19 NA AL046867 Out-of-frame Inter-chr p16.3 p13.2 108133 ChimerSeq ChiTaRs ChiTaRs HNRNPA2B1-HNRNPUL1 HNRNPA2B1 chr7 26236574 HNRNPUL1 chr19 41810020 Exonic hg19 NA BE560836 Out-of-frame Inter-chr p15.2 q13.2 108134 ChimerSeq ChiTaRs ChiTaRs RNF216-COL5A2 RNF216 chr7 5659833 COL5A2 chr2 189975002 Exonic hg19 NA AI742044 Out-of-frame Inter-chr p22.1 q32.2 108135 ChimerSeq ChiTaRs ChiTaRs CAMK2D-IQGAP1 CAMK2D chr4 114615896 IQGAP1 chr15 90931501 Exonic hg19 NA L33075 Out-of-frame Inter-chr q26 q26.1 108136 ChimerSeq ChiTaRs ChiTaRs PABPC4-GALNT5 PABPC4 chr1 40034548 GALNT5 chr2 158115681 Exonic hg19 NA BF109407 Out-of-frame Inter-chr p34.3 q24.1 108137 ChimerSeq ChiTaRs ChiTaRs EZR-CYB5R1 EZR chr6 159192379 CYB5R1 chr1 202932254 Exonic hg19 NA BE140557 Out-of-frame Inter-chr q25.3 q32.1 108138 ChimerSeq ChiTaRs ChiTaRs BAZ2B-DMTF1 BAZ2B chr2 160373059 DMTF1 chr7 86792810 Exonic hg19 NA DB236588 5'UTR-5'UTR Inter-chr q24.2 Transcription factor q21.12 Tumor suppressor gene Transcription factor 108139 ChimerSeq ChiTaRs ChiTaRs FLAD1-EGR3 FLAD1 chr1 154962672 EGR3 chr8 22545743 Exonic hg19 NA AV749172 Out-of-frame Inter-chr q21.3 p21.3 Transcription factor 108140 ChimerSeq ChiTaRs ChiTaRs SNRNP40-PRDX1 SNRNP40 chr1 31769566 PRDX1 chr1 45981406 Exonic hg19 NA CN369906 Out-of-frame Intra-chr p35.2 p34.1 108141 ChimerSeq ChiTaRs ChiTaRs KIF5C-SOD2 KIF5C chr2 149639327 SOD2 chr6 160105955 Exonic hg19 NA CD365980 Out-of-frame Inter-chr q25.3 Tumor suppressor gene 108142 ChimerSeq ChiTaRs ChiTaRs NCL-NPY NCL chr2 232326286 NPY chr7 24331284 Exonic hg19 NA AV718213 Out-of-frame Inter-chr q37.1 p15.3 108143 ChimerSeq ChiTaRs ChiTaRs FHIT-PEG10 FHIT chr3 61237135 PEG10 chr7 94298189 Exonic hg19 NA DB472087 Out-of-frame Inter-chr p14.2 Tumor suppressor gene q21.3 108144 ChimerSeq ChiTaRs ChiTaRs PHF8-BCL11A PHF8 chrX 53965664 BCL11A chr2 60756540 Exonic hg19 NA BF772185 Out-of-frame Inter-chr p11.22 p16.1 Oncogene Transcription factor 108145 ChimerSeq ChiTaRs ChiTaRs PSMD6-EIF3A PSMD6 chr3 64009080 EIF3A chr10 120802239 Exonic hg19 NA DA942713 Out-of-frame Inter-chr p14.1 q26.11 108146 ChimerSeq ChiTaRs ChiTaRs CPS1-PRDX3 CPS1 chr2 211421447 PRDX3 chr10 120927794 Exonic hg19 NA AV694689 Out-of-frame Inter-chr q34 q26.11 108147 ChimerSeq ChiTaRs ChiTaRs CCT4-ATG5 CCT4 chr2 62115571 ATG5 chr6 106634116 Exonic hg19 NA AI814482 Out-of-frame Inter-chr p15 q21 108148 ChimerSeq ChiTaRs ChiTaRs TBCC-TNFRSF12A TBCC chr6 42712968 TNFRSF12A chr16 3072058 Exonic hg19 NA BQ670175 Out-of-frame Inter-chr p21.1 p13.3 Tumor suppressor gene 108149 ChimerSeq ChiTaRs ChiTaRs OLFM3-RIMS1 OLFM3 chr1 102462558 RIMS1 chr6 73100298 Exonic hg19 NA DA062426 Out-of-frame Inter-chr p21.1 q13 108150 ChimerSeq ChiTaRs ChiTaRs C6orf48-B2M C6orf48 chr6 3096425 B2M chr15 45010033 Exonic hg19 NA CB959220 Out-of-frame Inter-chr Oncogene 108151 ChimerSeq ChiTaRs ChiTaRs PIGK-KIF21A PIGK chr1 77595396 KIF21A chr12 39726154 Exonic hg19 NA CB243604 Out-of-frame Inter-chr p31.1 q12 108152 ChimerSeq ChiTaRs ChiTaRs RPS20-JOSD2 RPS20 chr8 56987067 JOSD2 chr19 51009259 Exonic hg19 NA BM842093 Out-of-frame Inter-chr q12.1 q13.33 108153 ChimerSeq ChiTaRs ChiTaRs SPTBN1-RPS4X SPTBN1 chr2 54885078 RPS4X chrX 71492479 Exonic hg19 NA BF812451 Out-of-frame Inter-chr p16.2 Tumor suppressor gene q13.1 108154 ChimerSeq ChiTaRs ChiTaRs EIF4G3-LAPTM4A EIF4G3 chr1 21276568 LAPTM4A chr2 20251279 Exonic hg19 NA BP326154 Out-of-frame Inter-chr p36.12 p24.1 108155 ChimerSeq ChiTaRs ChiTaRs TERF1-ESYT2 TERF1 chr8 73958302 ESYT2 chr7 158526839 Exonic hg19 NA BF817571 Out-of-frame Inter-chr q21.11 Transcription factor q36.3 108156 ChimerSeq ChiTaRs ChiTaRs PPIL1-SMAP2 PPIL1 chr6 36842606 SMAP2 chr1 40881912 Exonic hg19 NA DB033860 Out-of-frame Inter-chr p21.2 p34.2 108157 ChimerSeq ChiTaRs ChiTaRs DTX3L-HLA-DRB5 DTX3L chr3 122293268 HLA-DRB5 chr6 32485163 Exonic hg19 NA AX748303 Out-of-frame Inter-chr q21.1 p21.32 108158 ChimerSeq ChiTaRs ChiTaRs CD164-PNRC1 CD164 chr6 109703640 PNRC1 chr6 89793470 Exonic hg19 NA BU655987 Out-of-frame Intra-chr q21 q15 108159 ChimerSeq ChiTaRs ChiTaRs CLEC3B-NPIPB7 CLEC3B chr3 45077560 NPIPB7 chr16 28877812 Exonic hg19 NA AW316808 Out-of-frame Inter-chr p21.31 p12.1 108160 ChimerSeq ChiTaRs ChiTaRs PSMC3-AKIRIN1 PSMC3 chr11 47447800 AKIRIN1 chr1 39463845 Exonic hg19 NA BG248359 Out-of-frame Inter-chr p11.2 p34.3 108161 ChimerSeq ChiTaRs ChiTaRs CLTA-MTPN CLTA chr9 36212051 MTPN chr7 135613585 Exonic hg19 NA AA993687 Out-of-frame Inter-chr p13.3 q33 108162 ChimerSeq ChiTaRs ChiTaRs PTGDS-MYL7 PTGDS chr9 139872044 MYL7 chr7 44178466 Exonic hg19 NA AJ711203 Out-of-frame Inter-chr q34.3 p13 108163 ChimerSeq ChiTaRs ChiTaRs RPS12-SMYD3 RPS12 chr6 133138703 SMYD3 chr1 246433107 Exonic hg19 NA BP319882 3'UTR-CDS Inter-chr q23.2 q44 Transcription factor 108164 ChimerSeq ChiTaRs ChiTaRs PITX2-PPP1R15A PITX2 chr4 111544207 PPP1R15A chr19 49377702 Exonic hg19 NA BC007987 Out-of-frame Inter-chr q25 Transcription factor q13.33 108165 ChimerSeq ChiTaRs ChiTaRs XRN1-GNPTAB XRN1 chr3 142029311 GNPTAB chr12 102139379 Exonic hg19 NA AI871771 Out-of-frame Inter-chr q23 q23.2 108166 ChimerSeq ChiTaRs ChiTaRs TNKS1BP1-PSG3 TNKS1BP1 chr11 57083394 PSG3 chr19 43407538 Exonic hg19 NA BG436080 Out-of-frame Inter-chr q12.1 q13.2 108167 ChimerSeq ChiTaRs ChiTaRs MYD88-MYLK MYD88 chr3 38181436 MYLK chr3 123382982 Exonic hg19 NA BP285886 Out-of-frame Intra-chr p22.2 Oncogene q21.1 108168 ChimerSeq ChiTaRs ChiTaRs CYP4A11-SLC4A7 CYP4A11 chr1 47407134 SLC4A7 chr3 27523208 Exonic hg19 NA W84867 Out-of-frame Inter-chr p33 p24.1 108169 ChimerSeq ChiTaRs ChiTaRs RPA2-HN1L RPA2 chr1 28241072 HN1L chr16 1749462 Exonic hg19 NA AK296898 Out-of-frame Inter-chr p35.3 108170 ChimerSeq ChiTaRs ChiTaRs RPL11-NDUFB4 RPL11 chr1 24022397 NDUFB4 chr3 120321083 Exonic hg19 NA CB409379 Out-of-frame Inter-chr p36.11 Tumor suppressor gene q13.33 108171 ChimerSeq ChiTaRs ChiTaRs WRAP73-TOB2P1 WRAP73 chr1 3552573 TOB2P1 chr6 28185335 Exonic hg19 NA AF318346 Out-of-frame Inter-chr p36.32 p22.1 108172 ChimerSeq ChiTaRs ChiTaRs DNAJB6-APOL3 DNAJB6 chr7 157174975 APOL3 chr22 36536648 Exonic hg19 NA AK297892 Out-of-frame Inter-chr q36.3 q12.3 108173 ChimerSeq ChiTaRs ChiTaRs NDUFA1-SPRED2 NDUFA1 chrX 119010699 SPRED2 chr2 65540124 Exonic hg19 NA CA311962 Out-of-frame Inter-chr q24 p14 108174 ChimerSeq ChiTaRs ChiTaRs SNHG6-SKAP2 SNHG6 chr8 67834787 SKAP2 chr7 26707912 Exonic hg19 NA AV758206 Out-of-frame Inter-chr q13.1 p15.2 108175 ChimerSeq ChiTaRs ChiTaRs C5orf24-LIMA1 C5orf24 chr5 134194027 LIMA1 chr12 50615960 Exonic hg19 NA AK130086 Out-of-frame Inter-chr q31.1 q13.12 Tumor suppressor gene 108176 ChimerSeq ChiTaRs ChiTaRs CCDC23-CLCA2 CCDC23 chr1 43282925 CLCA2 chr1 86904558 Exonic hg19 NA DB016747 5'UTR-CDS Intra-chr p22.3 108177 ChimerSeq ChiTaRs ChiTaRs WDR74-GTF3C5 WDR74 chr11 62609281 GTF3C5 chr9 135906060 Exonic hg19 NA DA391448 Out-of-frame Inter-chr q12.3 q34.13 108178 ChimerSeq ChiTaRs ChiTaRs EXT1-CLUL1 EXT1 chr8 118921703 CLUL1 chr18 597674 Exonic hg19 NA AK128498 Out-of-frame Inter-chr q24.11 Oncogene Tumor suppressor gene p11.32 108179 ChimerSeq ChiTaRs ChiTaRs FN1-CDKN1B FN1 chr2 216284057 CDKN1B chr12 12874585 Exonic hg19 NA BG925834 Out-of-frame Inter-chr q35 Oncogene p13.1 Tumor suppressor gene 108180 ChimerSeq ChiTaRs ChiTaRs TRIM5-YY1AP1 TRIM5 chr11 5959350 YY1AP1 chr1 155638419 Exonic hg19 NA BI827877 Out-of-frame Inter-chr p15.4 q22 108181 ChimerSeq ChiTaRs ChiTaRs GNB2L1-CAP1 GNB2L1 chr5 180663995 CAP1 chr1 40529946 Exonic hg19 NA AA723103 Out-of-frame Inter-chr Tumor suppressor gene p34.2 108182 ChimerSeq ChiTaRs ChiTaRs TPM2-FAH TPM2 chr9 35683173 FAH chr15 80450444 Exonic hg19 NA CN263730 Out-of-frame Inter-chr p13.3 q25.1 108183 ChimerSeq ChiTaRs ChiTaRs GLRX3-LYRM2 GLRX3 chr10 131978641 LYRM2 chr6 90346566 Exonic hg19 NA BU623284 Out-of-frame Inter-chr q26.3 q15 108184 ChimerSeq ChiTaRs ChiTaRs MTHFD1L-MTHFD1L MTHFD1L chr6 151301123 MTHFD1L chr6 151311062 Exonic hg19 NA AA764935 Out-of-frame Intra-chr q25.1 q25.1 108185 ChimerSeq ChiTaRs ChiTaRs ZNF678-SERPINA5 ZNF678 chr1 227839312 SERPINA5 chr14 95058968 Exonic hg19 NA AA889306 Out-of-frame Inter-chr q42.13 Transcription factor q32.13 108186 ChimerSeq ChiTaRs ChiTaRs PPP3CB-ODC1 PPP3CB chr10 75230966 ODC1 chr2 10583628 Exonic hg19 NA BF081601 Out-of-frame Inter-chr q22.2 p25.1 108187 ChimerSeq ChiTaRs ChiTaRs MCM7-AGAP3 MCM7 chr7 99704137 AGAP3 chr7 150820875 Exonic hg19 NA AK131236 Out-of-frame Intra-chr q22.1 q36.1 108188 ChimerSeq ChiTaRs ChiTaRs KDM5B-OXR1 KDM5B chr1 202777547 OXR1 chr8 107749747 Exonic hg19 NA BP208834 5'UTR-CDS Inter-chr q32.1 Transcription factor q23.1 108189 ChimerSeq ChiTaRs ChiTaRs IQCG-BPTF IQCG chr3 197681003 BPTF chr17 65914828 Exonic hg19 NA DA779835 Out-of-frame Inter-chr q29 q24.2 Transcription factor 108190 ChimerSeq ChiTaRs ChiTaRs FKBP15-IL4R FKBP15 chr9 116027161 IL4R chr16 27363904 Exonic hg19 NA CD369843 Out-of-frame Inter-chr q32 p12.1 108191 ChimerSeq ChiTaRs ChiTaRs FHIT-MYLK-AS1 FHIT chr3 59882001 MYLK-AS1 chr3 123337558 Exonic hg19 NA DA292821 Out-of-frame Intra-chr p14.2 Tumor suppressor gene q21.1 108192 ChimerSeq ChiTaRs ChiTaRs FAM129B-AFF4 FAM129B chr9 130298702 AFF4 chr5 132223632 Exonic hg19 NA BG013858 Out-of-frame Inter-chr q34.11 q31.1 108193 ChimerSeq ChiTaRs ChiTaRs ZC3HAV1-CTSS ZC3HAV1 chr7 138745312 CTSS chr1 150705390 Exonic hg19 NA CA309494 Out-of-frame Inter-chr q34 q21.3 108194 ChimerSeq ChiTaRs ChiTaRs AFF3-CDH3 AFF3 chr2 100623731 CDH3 chr16 68732430 Exonic hg19 NA AA425556 Out-of-frame Inter-chr q11.2 Oncogene q22.1 108195 ChimerSeq ChiTaRs ChiTaRs DAB1-PMP22 DAB1 chr1 58853384 PMP22 chr17 15134139 Exonic hg19 NA BM720166 Out-of-frame Inter-chr p32.1 p12 108196 ChimerSeq ChiTaRs ChiTaRs RPL37A-MYL6 RPL37A chr2 217366187 MYL6 chr12 56553913 Exonic hg19 NA BU954401 Out-of-frame Inter-chr q35 q13.2 108197 ChimerSeq ChiTaRs ChiTaRs GPAM-PRKCB GPAM chr10 113917140 PRKCB chr16 24231281 Exonic hg19 NA BM710854 In-Frame Inter-chr q25.2 p12.2 Tumor suppressor gene 108198 ChimerSeq ChiTaRs ChiTaRs PDLIM5-UBQLN1 PDLIM5 chr4 95524914 UBQLN1 chr9 86292712 Exonic hg19 NA BF772752 Out-of-frame Inter-chr q22.3 q21.32 108199 ChimerSeq ChiTaRs ChiTaRs EVI5-RFWD2 EVI5 chr1 92975364 RFWD2 chr1 175913967 Exonic hg19 NA AK025789 Out-of-frame Intra-chr p22.1 q25.2 Tumor suppressor gene 108200 ChimerSeq ChiTaRs ChiTaRs BRI3-LOC100507053 BRI3 chr7 97920836 LOC100507053 chr4 100045514 Exonic hg19 NA CB162414 Out-of-frame Inter-chr q21.3 108201 ChimerSeq ChiTaRs ChiTaRs BOLA3-USP22 BOLA3 chr2 74372375 USP22 chr17 20911577 Exonic hg19 NA AW135461 Out-of-frame Inter-chr p13.1 p11.2 108202 ChimerSeq ChiTaRs ChiTaRs POMGNT2-CHFR POMGNT2 chr3 43121037 CHFR chr12 133446334 Exonic hg19 NA AA368045 Out-of-frame Inter-chr p22.1 q24.33 Tumor suppressor gene 108203 ChimerSeq ChiTaRs ChiTaRs RNH1-LOC100507412 RNH1 chr11 500564 LOC100507412 chr? 109685 Exonic hg19 NA BF898825 Out-of-frame Inter-chr Tumor suppressor gene 108204 ChimerSeq ChiTaRs ChiTaRs PER3-AKAP11 PER3 chr1 7897210 AKAP11 chr13 42897343 Exonic hg19 NA AK307760 Out-of-frame Inter-chr p36.23 q14.11 108205 ChimerSeq ChiTaRs ChiTaRs STAG2-EIF3A STAG2 chrX 123205097 EIF3A chr10 120820815 Exonic hg19 NA AW501580 Out-of-frame Inter-chr q25 Oncogene q26.11 108206 ChimerSeq ChiTaRs ChiTaRs RBM3-NME7 RBM3 chrX 48436672 NME7 chr1 169102012 Exonic hg19 NA CA433037 Out-of-frame Inter-chr p11.23 q24.2 108207 ChimerSeq ChiTaRs ChiTaRs ACTB-THBS3 ACTB chr7 5570232 THBS3 chr1 155176037 Exonic hg19 NA BP286903 3'UTR-3'UTR Inter-chr p22.1 q22 108208 ChimerSeq ChiTaRs ChiTaRs ATXN1-H1FX ATXN1 chr6 16492183 H1FX chr3 129034893 Exonic hg19 NA BI906151 Out-of-frame Inter-chr p22.3 q21.3 108209 ChimerSeq ChiTaRs ChiTaRs LOC100133985-ZNF346 LOC100133985 chr2 70352443 ZNF346 chr5 176489059 Exonic hg19 NA DA610313 Out-of-frame Inter-chr q35.2 Transcription factor 108210 ChimerSeq ChiTaRs ChiTaRs MUSK-NUP133 MUSK chr9 113530363 NUP133 chr1 229623244 Exonic hg19 NA DA418651 Out-of-frame Inter-chr q31.3 TK:Musk q42.13 108211 ChimerSeq ChiTaRs ChiTaRs ABCA1-LAS1L ABCA1 chr9 107588168 LAS1L chrX 64732463 Exonic hg19 NA AK130814 CDS-3'UTR Inter-chr q31.1 q12 108212 ChimerSeq ChiTaRs ChiTaRs CREB3L1-COL6A3 CREB3L1 chr11 46342959 COL6A3 chr2 238261986 Exonic hg19 NA CA447052 Out-of-frame Inter-chr p11.2 Tumor suppressor gene Transcription factor q37.3 108213 ChimerSeq ChiTaRs ChiTaRs ABHD6-LOC100507412 ABHD6 chr3 58253017 LOC100507412 chr? 109668 Exonic hg19 NA BP275536 Out-of-frame Inter-chr p14.3 108214 ChimerSeq ChiTaRs ChiTaRs BMPR2-AP4S1 BMPR2 chr2 203428962 AP4S1 chr14 31562347 Exonic hg19 NA W23313 Out-of-frame Inter-chr q33.1 TKL:STKR Tumor suppressor gene q12 108215 ChimerSeq ChiTaRs ChiTaRs AFP-SORT1 AFP chr4 74315824 SORT1 chr1 109855081 Exonic hg19 NA BP238936 Out-of-frame Inter-chr q13.3 p13.3 108216 ChimerSeq ChiTaRs ChiTaRs PROSC-OSTM1 PROSC chr8 37623876 OSTM1 chr6 108363813 Exonic hg19 NA DB502399 Out-of-frame Inter-chr q21 108217 ChimerSeq ChiTaRs ChiTaRs TTN-UQCRC1 TTN chr2 179672150 UQCRC1 chr3 48636435 Exonic hg19 NA BC029400 5'UTR-3'UTR Inter-chr q31.2 CAMK:MLCK p21.31 108218 ChimerSeq ChiTaRs ChiTaRs PRKCDBP-NDUFS2 PRKCDBP chr11 6340428 NDUFS2 chr1 161179352 Exonic hg19 NA AA946663 Out-of-frame Inter-chr Tumor suppressor gene q23.3 108219 ChimerSeq ChiTaRs ChiTaRs PDCD6IP-PDCD10 PDCD6IP chr3 33895473 PDCD10 chr3 167437850 Exonic hg19 NA BE829522 Out-of-frame Intra-chr p22.3 q26.1 108220 ChimerSeq ChiTaRs ChiTaRs CROCC-PSG3 CROCC chr1 17067175 PSG3 chr19 43370618 Exonic hg19 NA AK075135 Out-of-frame Inter-chr p36.13 q13.2 108221 ChimerSeq ChiTaRs ChiTaRs FAHD2B-SEPW1 FAHD2B chr2 97749488 SEPW1 chr19 48287653 Exonic hg19 NA AA503553 Out-of-frame Inter-chr q11.2 108222 ChimerSeq ChiTaRs ChiTaRs TPD52-ATAD2 TPD52 chr8 81083700 ATAD2 chr8 124371861 Exonic hg19 NA BU429623 Out-of-frame Intra-chr q21.13 q24.13 108223 ChimerSeq ChiTaRs ChiTaRs WRAP73-RGPD1 WRAP73 chr1 3566625 RGPD1 chr2 88093150 Exonic hg19 NA DB099117 Out-of-frame Inter-chr p36.32 p11.2 108224 ChimerSeq ChiTaRs ChiTaRs LOC100506054-MED13 LOC100506054 chr2 3609254 MED13 chr17 60020968 Exonic hg19 NA AW837650 Out-of-frame Inter-chr q23.2 108225 ChimerSeq ChiTaRs ChiTaRs ANK3-CCDC106 ANK3 chr10 61847984 CCDC106 chr19 56164472 Exonic hg19 NA BX107511 Out-of-frame Inter-chr q21.2 q13.42 108226 ChimerSeq ChiTaRs ChiTaRs RPL37A-PPIA RPL37A chr2 217366187 PPIA chr7 44839426 Exonic hg19 NA BQ227726 Out-of-frame Inter-chr q35 p13 108227 ChimerSeq ChiTaRs ChiTaRs ZMIZ1-DHFR ZMIZ1 chr10 81073434 DHFR chr5 79947669 Exonic hg19 NA BC068072 Out-of-frame Inter-chr q22.3 q14.1 108228 ChimerSeq ChiTaRs ChiTaRs VEGFA-TRBV20-1 VEGFA chr6 43749719 TRBV20-1 chr16 2009600 Exonic hg19 NA BI869727 Out-of-frame Inter-chr p21.1 Tumor suppressor gene 108229 ChimerSeq ChiTaRs ChiTaRs PPAP2B-PHPT1 PPAP2B chr1 56960714 PHPT1 chr9 139745226 Exonic hg19 NA BP388129 Out-of-frame Inter-chr q34.3 108230 ChimerSeq ChiTaRs ChiTaRs SEPT11-OLFML2A 2011_ 9_ 1_ chr4 77958519 OLFML2A chr9 127574005 Exonic hg19 NA AI452502 Out-of-frame Inter-chr q33.3 108231 ChimerSeq ChiTaRs ChiTaRs JAZF1-MCFD2 JAZF1 chr7 27872556 MCFD2 chr2 47136175 Exonic hg19 NA CA308526 Out-of-frame Inter-chr p15.1 Transcription factor p21 108232 ChimerSeq ChiTaRs ChiTaRs OSBP-SRRM1 OSBP chr11 59382845 SRRM1 chr1 24996771 Exonic hg19 NA BP420837 Out-of-frame Inter-chr q12.1 p36.11 108233 ChimerSeq ChiTaRs ChiTaRs ALDH18A1-ZNF271 ALDH18A1 chr10 97387295 ZNF271 chr18 32888363 Exonic hg19 NA BX503218 Out-of-frame Inter-chr q24.1 108234 ChimerSeq ChiTaRs ChiTaRs GNB2L1-CDK5RAP3 GNB2L1 chr5 180670792 CDK5RAP3 chr17 46054153 Exonic hg19 NA BP431119 Out-of-frame Inter-chr Tumor suppressor gene q21.32 108235 ChimerSeq ChiTaRs ChiTaRs HIST1H2AM-HRH1 HIST1H2AM chr6 27860963 HRH1 chr3 11264553 Exonic hg19 NA BP225302 5'UTR-5'UTR Inter-chr p22.1 p25.3 108236 ChimerSeq ChiTaRs ChiTaRs ZFYVE20-TMEM136 ZFYVE20 chr3 15112893 TMEM136 chr11 120203500 Exonic hg19 NA CB216012 Out-of-frame Inter-chr q23.3 108237 ChimerSeq ChiTaRs ChiTaRs ZNF124-USP9X ZNF124 chr1 247323169 USP9X chrX 41077623 Exonic hg19 NA DB032780 Out-of-frame Inter-chr q44 Transcription factor p11.4 Oncogene 108238 ChimerSeq ChiTaRs ChiTaRs NKIRAS1-IL8 NKIRAS1 chr3 23961030 IL8 chr4 74606286 Exonic hg19 NA BM839461 Out-of-frame Inter-chr p24.2 108239 ChimerSeq ChiTaRs ChiTaRs POLR2H-DTX3L POLR2H chr3 184086367 DTX3L chr3 122291997 Exonic hg19 NA BF001934 Out-of-frame Intra-chr q27.1 q21.1 108240 ChimerSeq ChiTaRs ChiTaRs GAS5-PABPC1L GAS5 chr1 173833576 PABPC1L chr20 43580600 Exonic hg19 NA DB268518 Out-of-frame Inter-chr q25.1 Tumor suppressor gene q13.12 108241 ChimerSeq ChiTaRs ChiTaRs HNRNPA2B1-NSD1 HNRNPA2B1 chr7 26231578 NSD1 chr5 176637012 Exonic hg19 NA AA928524 Out-of-frame Inter-chr p15.2 q35.3 Oncogene 108242 ChimerSeq ChiTaRs ChiTaRs UBE2E2-BRPF3 UBE2E2 chr3 23631661 BRPF3 chr6 36200148 Exonic hg19 NA BQ375843 Out-of-frame Inter-chr p24.3 p21.31 108243 ChimerSeq ChiTaRs ChiTaRs SH3RF1-CMAS SH3RF1 chr4 170051300 CMAS chr12 22199463 Exonic hg19 NA DA571172 Out-of-frame Inter-chr q33 p12.1 108244 ChimerSeq ChiTaRs ChiTaRs CD82-SYNJ2BP-COX16 CD82 chr11 44641054 SYNJ2BP-COX16 chr14 70833555 Exonic hg19 NA BE867666 Out-of-frame Inter-chr p11.2 Tumor suppressor gene q24.2 108245 ChimerSeq ChiTaRs ChiTaRs MOB2-HSPB7 MOB2 chr11 1502116 HSPB7 chr1 16341381 Exonic hg19 NA AK296598 Out-of-frame Inter-chr p15.5 p36.13 Tumor suppressor gene 108246 ChimerSeq ChiTaRs ChiTaRs NGFRAP1-AKAP1 NGFRAP1 chrX 102632636 AKAP1 chr17 55183830 Exonic hg19 NA BI038427 Out-of-frame Inter-chr q22 108247 ChimerSeq ChiTaRs ChiTaRs FHL2-RPL31 FHL2 chr2 106015508 RPL31 chr2 101623695 Exonic hg19 NA AB024057 Out-of-frame Intra-chr q12.2 q11.2 108248 ChimerSeq ChiTaRs ChiTaRs EIF4H-PKP3 EIF4H chr7 73611005 PKP3 chr11 404687 Exonic hg19 NA BU540394 Out-of-frame Inter-chr q11.23 p15.5 108249 ChimerSeq ChiTaRs ChiTaRs RPS8-AKT2 RPS8 chr1 45244127 AKT2 chr19 40743955 Exonic hg19 NA DA657610 Out-of-frame Inter-chr p34.1 q13.2 AGC:Akt Oncogene 108250 ChimerSeq ChiTaRs ChiTaRs F11R-GOLGB1 F11R chr1 160990968 GOLGB1 chr3 121412689 Exonic hg19 NA BC057227 Out-of-frame Inter-chr q23.3 q13.33 108251 ChimerSeq ChiTaRs ChiTaRs CALCR-SEPT11 CALCR chr7 93075112 2011_ 9_ 1_ chr4 77959059 Exonic hg19 NA AW610110 Out-of-frame Inter-chr q21.3 108252 ChimerSeq ChiTaRs ChiTaRs PRELP-LOC100507412 PRELP chr1 203456291 LOC100507412 chr? 110051 Exonic hg19 NA BQ183043 Out-of-frame Inter-chr q32.1 108253 ChimerSeq ChiTaRs ChiTaRs AHNAK-GPNMB AHNAK chr11 62291981 GPNMB chr7 23314595 Exonic hg19 NA BG435349 Out-of-frame Inter-chr q12.3 Tumor suppressor gene p15.3 108254 ChimerSeq ChiTaRs ChiTaRs CTSL1-EIF4A1 CTSL1 chr9 90346046 EIF4A1 chr17 7481876 Exonic hg19 NA BQ670981 Out-of-frame Inter-chr p13.1 108255 ChimerSeq ChiTaRs ChiTaRs CMBL-AATF CMBL chr5 10290712 AATF chr17 35316472 Exonic hg19 NA BU507510 Out-of-frame Inter-chr p15.2 108256 ChimerSeq ChiTaRs ChiTaRs SRPRB-SRPRB SRPRB chr3 133538782 SRPRB chr3 133539335 Exonic hg19 NA T05374 Out-of-frame Intra-chr q22.1 q22.1 108257 ChimerSeq ChiTaRs ChiTaRs GGPS1-INO80B GGPS1 chr1 235492966 INO80B chr2 74686460 Exonic hg19 NA AA325909 Out-of-frame Inter-chr q42.3 p13.1 108258 ChimerSeq ChiTaRs ChiTaRs ATAD3A-RUVBL1 ATAD3A chr1 1469657 RUVBL1 chr3 127819439 Exonic hg19 NA BU846118 Out-of-frame Inter-chr p36.33 q21.3 108259 ChimerSeq ChiTaRs ChiTaRs GAS5-DPH2 GAS5 chr1 173836185 DPH2 chr1 44436638 Exonic hg19 NA BF182707 Out-of-frame Intra-chr q25.1 Tumor suppressor gene p34.1 108260 ChimerSeq ChiTaRs ChiTaRs PRKDC-WDR83 PRKDC chr8 48743225 WDR83 chr19 12779034 Exonic hg19 NA W58317 Out-of-frame Inter-chr q11.21 Oncogene p13.13 108261 ChimerSeq ChiTaRs ChiTaRs MRFAP1-PPIA MRFAP1 chr4 6642593 PPIA chr7 44836289 Exonic hg19 NA BQ721575 Out-of-frame Inter-chr p16.1 p13 108262 ChimerSeq ChiTaRs ChiTaRs SMEK2-AMY2B SMEK2 chr2 55843732 AMY2B chr1 104114175 Exonic hg19 NA DB221809 Out-of-frame Inter-chr p21.1 108263 ChimerSeq ChiTaRs ChiTaRs EGR3-PLAA EGR3 chr8 22548787 PLAA chr9 26923255 Exonic hg19 NA AW270084 Out-of-frame Inter-chr p21.3 Transcription factor p21.2 108264 ChimerSeq ChiTaRs ChiTaRs PDCD4-LOC338799 PDCD4 chr10 112631778 LOC338799 chr12 122233173 Exonic hg19 NA BI912454 Out-of-frame Inter-chr q25.2 Tumor suppressor gene 108265 ChimerSeq ChiTaRs ChiTaRs RASSF4-DDB1 RASSF4 chr10 45472005 DDB1 chr11 61067373 Exonic hg19 NA AA738370 Out-of-frame Inter-chr q11.21 Tumor suppressor gene q12.2 108266 ChimerSeq ChiTaRs ChiTaRs MRPS21-RPS5 MRPS21 chr1 150280782 RPS5 chr19 58904724 Exonic hg19 NA BU175700 Out-of-frame Inter-chr q21.2 q13.43 108267 ChimerSeq ChiTaRs ChiTaRs TP53I11-ARMC2 TP53I11 chr11 44956247 ARMC2 chr6 109228662 Exonic hg19 NA BQ675858 Out-of-frame Inter-chr p11.2 q21 108268 ChimerSeq ChiTaRs ChiTaRs GABRE-GABRE GABRE chrX 151122867 GABRE chrX 151122487 Exonic hg19 NA BF095110 Out-of-frame Intra-chr q28 q28 108269 ChimerSeq ChiTaRs ChiTaRs NBPF15-GPR116 NBPF15 chr1 148582387 GPR116 chr6 46836589 Exonic hg19 NA BF842665 Out-of-frame Inter-chr q21.1 108270 ChimerSeq ChiTaRs ChiTaRs PLP2-STC2 PLP2 chrX 49031438 STC2 chr5 172752896 Exonic hg19 NA AI086972 Out-of-frame Inter-chr p11.23 q35.2 108271 ChimerSeq ChiTaRs ChiTaRs ZNF81-NDUFA4 ZNF81 chrX 47765728 NDUFA4 chr7 10979670 Exonic hg19 NA AF114060 Out-of-frame Inter-chr p11.23 Transcription factor p21.3 108272 ChimerSeq ChiTaRs ChiTaRs SLC9A1-COL4A1 SLC9A1 chr1 27425417 COL4A1 chr13 110861195 Exonic hg19 NA AI992338 3'UTR-CDS Inter-chr p36.11 q34 108273 ChimerSeq ChiTaRs ChiTaRs CCK-EXOC6B CCK chr3 42306257 EXOC6B chr2 72406523 Exonic hg19 NA DA212182 Out-of-frame Inter-chr p22.1 p13.2 108274 ChimerSeq ChiTaRs ChiTaRs DUSP5-RAP2B DUSP5 chr10 112271214 RAP2B chr3 152881930 Exonic hg19 NA AW867808 Out-of-frame Inter-chr q25.2 Tumor suppressor gene q25.2 108275 ChimerSeq ChiTaRs ChiTaRs GNB1-DDX50 GNB1 chr1 1822413 DDX50 chr10 70670061 Exonic hg19 NA BQ228847 Out-of-frame Inter-chr p36.33 q22.1 108276 ChimerSeq ChiTaRs ChiTaRs PNKD-EPB41L4A PNKD chr2 219210650 EPB41L4A chr5 111496563 Exonic hg19 NA DA278822 Out-of-frame Inter-chr q35 q22.2 108277 ChimerSeq ChiTaRs ChiTaRs FLJ23867-FLJ23867 FLJ23867 chr1 180168633 FLJ23867 chr1 180168880 Exonic hg19 NA AW857937 Out-of-frame Intra-chr 108278 ChimerSeq ChiTaRs ChiTaRs UBN2-FUNDC2P2 UBN2 chr7 138969298 FUNDC2P2 chr2 84517806 Exonic hg19 NA BC040550 Out-of-frame Inter-chr q34 p11.2 108279 ChimerSeq ChiTaRs ChiTaRs ARNT-CRISPLD2 ARNT chr1 150783004 CRISPLD2 chr16 84941676 Exonic hg19 NA BM991829 Out-of-frame Inter-chr q21.3 Oncogene Transcription factor q24.1 108280 ChimerSeq ChiTaRs ChiTaRs GPNMB-TSIX GPNMB chr7 23297013 TSIX chrX 73039507 Exonic hg19 NA AA463344 Out-of-frame Inter-chr p15.3 q13.2 108281 ChimerSeq ChiTaRs ChiTaRs SLC44A5-PLEKHA7 SLC44A5 chr1 76076745 PLEKHA7 chr11 16811358 Exonic hg19 NA DB455667 Out-of-frame Inter-chr p31.1 p15.1 108282 ChimerSeq ChiTaRs ChiTaRs ATG7-GNB2 ATG7 chr3 11471436 GNB2 chr7 100276646 Exonic hg19 NA AW316925 Out-of-frame Inter-chr p25.3 q22.1 108283 ChimerSeq ChiTaRs ChiTaRs AFTPH-SOS2 AFTPH chr2 64819267 SOS2 chr14 50626081 Exonic hg19 NA AA824604 Out-of-frame Inter-chr p14 q21.3 108284 ChimerSeq ChiTaRs ChiTaRs ORC5-PREB ORC5 chr7 103770700 PREB chr2 27356443 Exonic hg19 NA DB179712 Out-of-frame Inter-chr q22.2 p23.3 Transcription factor 108285 ChimerSeq ChiTaRs ChiTaRs CD81-ATPIF1 CD81 chr11 2417885 ATPIF1 chr1 28562748 Exonic hg19 NA AA431916 Out-of-frame Inter-chr p15.5 p35.3 108286 ChimerSeq ChiTaRs ChiTaRs LARP1B-BTG3 LARP1B chr4 129003378 BTG3 chr21 18966245 Exonic hg19 NA BX107631 Out-of-frame Inter-chr q28.2 Tumor suppressor gene 108287 ChimerSeq ChiTaRs ChiTaRs BCYRN1-BAG1 BCYRN1 chrX 70753170 BAG1 chr9 33252469 Exonic hg19 NA BC073955 3'UTR-3'UTR Inter-chr p21 p13.3 108288 ChimerSeq ChiTaRs ChiTaRs NUDCD3-LMCD1 NUDCD3 chr7 44507966 LMCD1 chr3 8578958 Exonic hg19 NA AI078102 Out-of-frame Inter-chr p13 p25.3 108289 ChimerSeq ChiTaRs ChiTaRs GBF1-ARF3 GBF1 chr10 104142653 ARF3 chr12 49332083 Exonic hg19 NA H14073 Out-of-frame Inter-chr q24.32 q13.12 108290 ChimerSeq ChiTaRs ChiTaRs HNRNPA2B1-AUTS2 HNRNPA2B1 chr7 26240354 AUTS2 chr7 70236556 Exonic hg19 NA CN262853 Out-of-frame Intra-chr p15.2 q11.22 108291 ChimerSeq ChiTaRs ChiTaRs UBAP2-MLH1 UBAP2 chr9 34048882 MLH1 chr3 37067125 Exonic hg19 NA DA038406 Out-of-frame Inter-chr p13.3 p22.2 Oncogene Tumor suppressor gene 108292 ChimerSeq ChiTaRs ChiTaRs MARCH6-HSPA9 2006_ 3_ 1_ chr5 10378944 HSPA9 chr5 137902388 Exonic hg19 NA DA922289 Out-of-frame Intra-chr q31.2 108293 ChimerSeq ChiTaRs ChiTaRs RPLP2-LOC100507412 RPLP2 chr11 812875 LOC100507412 chr? 109863 Exonic hg19 NA CK725085 Out-of-frame Inter-chr p15.5 108294 ChimerSeq ChiTaRs ChiTaRs SYBU-RBM23 SYBU chr8 110653628 RBM23 chr14 23371276 Exonic hg19 NA BF762412 Out-of-frame Inter-chr q23.2 q11.2 108295 ChimerSeq ChiTaRs ChiTaRs VOPP1-VOPP1 VOPP1 chr7 55559224 VOPP1 chr7 55557725 Exonic hg19 NA AW138673 Out-of-frame Intra-chr p11.2 p11.2 108296 ChimerSeq ChiTaRs ChiTaRs POLR2H-SRRT POLR2H chr3 184086331 SRRT chr7 100485876 Exonic hg19 NA AI680578 Out-of-frame Inter-chr q27.1 q22.1 108297 ChimerSeq ChiTaRs ChiTaRs TMED4-ENG TMED4 chr7 44621840 ENG chr9 130577296 Exonic hg19 NA AK123738 Out-of-frame Inter-chr p13 q34.11 108298 ChimerSeq ChiTaRs ChiTaRs UBE2D3-ARPC5 UBE2D3 chr4 103718554 ARPC5 chr1 183596463 Exonic hg19 NA BP368716 Out-of-frame Inter-chr q24 q25.3 108299 ChimerSeq ChiTaRs ChiTaRs PRKAB2-RFWD2 PRKAB2 chr1 146644053 RFWD2 chr1 176118142 Exonic hg19 NA DA824273 Out-of-frame Intra-chr q21.1 q25.2 Tumor suppressor gene 108300 ChimerSeq ChiTaRs ChiTaRs GOLGB1-ATG5 GOLGB1 chr3 121383119 ATG5 chr6 106634318 Exonic hg19 NA AW139772 Out-of-frame Inter-chr q13.33 q21 108301 ChimerSeq ChiTaRs ChiTaRs ASB13-SOX7 ASB13 chr10 5708541 SOX7 chr8 10583187 Exonic hg19 NA AU117748 Out-of-frame Inter-chr p15.1 p23.1 Tumor suppressor gene Transcription factor 108302 ChimerSeq ChiTaRs ChiTaRs SSR2-ZNF738 SSR2 chr1 155979248 ZNF738 chr19 21561632 Exonic hg19 NA CA335796 Out-of-frame Inter-chr q22 p12 108303 ChimerSeq ChiTaRs ChiTaRs TRIM41-PPY TRIM41 chr5 180662580 PPY chr17 42018172 Exonic hg19 NA BP384232 Out-of-frame Inter-chr q35.3 q21.31 108304 ChimerSeq ChiTaRs ChiTaRs MAPK10-INPP4B MAPK10 chr4 87281206 INPP4B chr4 143067074 Exonic hg19 NA BP360877 Out-of-frame Intra-chr q21.3 Tumor suppressor gene q31.21 Tumor suppressor gene 108305 ChimerSeq ChiTaRs ChiTaRs MIR548F1-MET MIR548F1 chr1 186342542 MET chr7 116414931 Exonic hg19 NA U08818 Out-of-frame Inter-chr q21.1 q31.2 TK:Met Oncogene 108306 ChimerSeq ChiTaRs ChiTaRs CRTAP-PPP2R5C CRTAP chr3 33185183 PPP2R5C chr14 102393190 Exonic hg19 NA AA410780 Out-of-frame Inter-chr p22.3 q32.31 Tumor suppressor gene 108307 ChimerSeq ChiTaRs ChiTaRs SFT2D1-GMFB SFT2D1 chr6 166743073 GMFB chr14 54941206 Exonic hg19 NA BG178962 Out-of-frame Inter-chr q27 q22.2 108308 ChimerSeq ChiTaRs ChiTaRs SND1-SPTBN1 SND1 chr7 127724896 SPTBN1 chr2 54886326 Exonic hg19 NA BF081959 Out-of-frame Inter-chr q32.1 p16.2 Tumor suppressor gene 108309 ChimerSeq ChiTaRs ChiTaRs QDPR-STK40 QDPR chr4 17492324 STK40 chr1 36831846 Exonic hg19 NA BF964008 Out-of-frame Inter-chr p15.32 p34.3 108310 ChimerSeq ChiTaRs ChiTaRs APBB1-UBC APBB1 chr11 6432050 UBC chr12 125398219 Exonic hg19 NA BY796539 Out-of-frame Inter-chr p15.4 q24.31 108311 ChimerSeq ChiTaRs ChiTaRs CNTNAP2-SPOCK3 CNTNAP2 chr7 147336399 SPOCK3 chr4 167656189 Exonic hg19 NA DA286801 Out-of-frame Inter-chr Tumor suppressor gene q32.3 108312 ChimerSeq ChiTaRs ChiTaRs ITGA4-RPS6KA3 ITGA4 chr2 182323044 RPS6KA3 chrX 20211638 Exonic hg19 NA DA592743 Out-of-frame Inter-chr q31.3 p22.12 108313 ChimerSeq ChiTaRs ChiTaRs MTM1-EMG1 MTM1 chrX 149840410 EMG1 chr12 7090246 Exonic hg19 NA AU125262 Out-of-frame Inter-chr q28 p13.31 108314 ChimerSeq ChiTaRs ChiTaRs EIF4G1-TPM2 EIF4G1 chr3 184040401 TPM2 chr9 35685514 Exonic hg19 NA AW859452 Out-of-frame Inter-chr q27.1 p13.3 108315 ChimerSeq ChiTaRs ChiTaRs UBTD2-PDCD7 UBTD2 chr5 171639232 PDCD7 chr15 65410056 Exonic hg19 NA BF383106 Out-of-frame Inter-chr q35.1 q22.31 108316 ChimerSeq ChiTaRs ChiTaRs RCAN2-FAF1 RCAN2 chr6 46315079 FAF1 chr1 50922969 Exonic hg19 NA BF957327 Out-of-frame Inter-chr p12.3 p32.3 108317 ChimerSeq ChiTaRs ChiTaRs PNRC1-EZR PNRC1 chr6 89790532 EZR chr6 159188473 Exonic hg19 NA BM762912 Out-of-frame Intra-chr q15 q25.3 108318 ChimerSeq ChiTaRs ChiTaRs SAA1-GYS2 SAA1 chr11 18291274 GYS2 chr12 21689127 Exonic hg19 NA BC070311 Out-of-frame Inter-chr p15.1 Tumor suppressor gene p12.1 108319 ChimerSeq ChiTaRs ChiTaRs HLA-B-CCT7 HLA-B chr6 2628815 CCT7 chr2 73461456 Exonic hg19 NA BF818027 Out-of-frame Inter-chr p13.2 108320 ChimerSeq ChiTaRs ChiTaRs OSBPL9-TBC1D3 OSBPL9 chr1 52135158 TBC1D3 chr17 36351958 Exonic hg19 NA BQ349500 Out-of-frame Inter-chr p32.3 q12 108321 ChimerSeq ChiTaRs ChiTaRs BCHE-SLC35E3 BCHE chr3 165491151 SLC35E3 chr12 69140400 Exonic hg19 NA BP379106 Out-of-frame Inter-chr q26.1 q15 108322 ChimerSeq ChiTaRs ChiTaRs CPLX2-RAB6B CPLX2 chr5 175306010 RAB6B chr3 133543660 Exonic hg19 NA BP211536 Out-of-frame Inter-chr q35.2 q22.1 108323 ChimerSeq ChiTaRs ChiTaRs TRIM33-COLEC12 TRIM33 chr1 115053436 COLEC12 chr18 348063 Exonic hg19 NA CN397882 Out-of-frame Inter-chr p13.2 Oncogene p11.32 108324 ChimerSeq ChiTaRs ChiTaRs PKHD1L1-MACF1 PKHD1L1 chr8 110437462 MACF1 chr1 39924756 Exonic hg19 NA AK128617 Out-of-frame Inter-chr q23.1 p34.3 108325 ChimerSeq ChiTaRs ChiTaRs HIST1H2AM-EEF1A1 HIST1H2AM chr6 27860963 EEF1A1 chr6 74229738 Exonic hg19 NA DB120764 5'UTR-CDS Intra-chr p22.1 q13 Tumor suppressor gene 108326 ChimerSeq ChiTaRs ChiTaRs ATG4B-CHRDL1 ATG4B chr2 242610929 CHRDL1 chrX 109919275 Exonic hg19 NA BE768324 Out-of-frame Inter-chr q37.3 q23 108327 ChimerSeq ChiTaRs ChiTaRs RBM10-WWP2 RBM10 chrX 47006897 WWP2 chr16 69967872 Exonic hg19 NA DA936538 In-Frame Inter-chr p11.3 q22.1 108328 ChimerSeq ChiTaRs ChiTaRs PPIL3-NEMF PPIL3 chr2 201753992 NEMF chr14 50065705 Exonic hg19 NA AK027315 Out-of-frame Inter-chr q33.1 q21.3 108329 ChimerSeq ChiTaRs ChiTaRs MZT2B-IGFBP3 MZT2B chr2 130948300 IGFBP3 chr7 45960457 Exonic hg19 NA BU753901 3'UTR-CDS Inter-chr q21.1 p12.3 Tumor suppressor gene 108330 ChimerSeq ChiTaRs ChiTaRs EBNA1BP2-ALB EBNA1BP2 chr1 43713713 ALB chr4 74270084 Exonic hg19 NA DA643030 Out-of-frame Inter-chr p34.2 q13.3 108331 ChimerSeq ChiTaRs ChiTaRs CDK5-SDCBP CDK5 chr7 150754227 SDCBP chr8 59481393 Exonic hg19 NA W47044 Out-of-frame Inter-chr q36.1 CMGC:CDK q12.1 108332 ChimerSeq ChiTaRs ChiTaRs CTNNB1-SREK1 CTNNB1 chr3 41281426 SREK1 chr5 65452064 Exonic hg19 NA BE177332 Out-of-frame Inter-chr p22.1 Oncogene q12.3 108333 ChimerSeq ChiTaRs ChiTaRs RNU11-HBS1L RNU11 chr1 28975228 HBS1L chr6 135286225 Exonic hg19 NA AK292656 Out-of-frame Inter-chr p35.3 q23.3 108334 ChimerSeq ChiTaRs ChiTaRs ANK3-RPS3 ANK3 chr10 62493082 RPS3 chr11 75115767 Exonic hg19 NA AK172736 Out-of-frame Inter-chr q21.2 q13.4 108335 ChimerSeq ChiTaRs ChiTaRs MAPK8IP1-CPSF7 MAPK8IP1 chr11 45927510 CPSF7 chr11 61170422 Exonic hg19 NA BM823483 Out-of-frame Intra-chr p11.2 q12.2 108336 ChimerSeq ChiTaRs ChiTaRs RPS13-HDGF RPS13 chr11 17099010 HDGF chr1 156713960 Exonic hg19 NA BQ324806 Out-of-frame Inter-chr p15.1 q23.1 108337 ChimerSeq ChiTaRs ChiTaRs ERMN-SEPT8 ERMN chr2 158176931 2008_ 9_ 1_ chr5 132099485 Exonic hg19 NA DA055190 Out-of-frame Inter-chr q24.1 108338 ChimerSeq ChiTaRs ChiTaRs SKIV2L-ABCA8 SKIV2L chr6 3267301 ABCA8 chr17 66863750 Exonic hg19 NA AV702413 Out-of-frame Inter-chr q24.2 108339 ChimerSeq ChiTaRs ChiTaRs RPL5-WDR76 RPL5 chr1 93307478 WDR76 chr15 44158338 Exonic hg19 NA AI376067 Out-of-frame Inter-chr p22.1 Tumor suppressor gene q15.3 108340 ChimerSeq ChiTaRs ChiTaRs SSR3-UBA3 SSR3 chr3 156272897 UBA3 chr3 69126984 Exonic hg19 NA BP379122 Out-of-frame Intra-chr q25.31 p14.1 108341 ChimerSeq ChiTaRs ChiTaRs LHFPL3-MLL2 LHFPL3 chr7 104311682 MLL2 chr12 49430914 Exonic hg19 NA BF829819 Out-of-frame Inter-chr q22.2 108342 ChimerSeq ChiTaRs ChiTaRs C1orf174-DNM1L C1orf174 chr1 3806012 DNM1L chr12 32897063 Exonic hg19 NA CA413140 Out-of-frame Inter-chr p36.32 p11.21 108343 ChimerSeq ChiTaRs ChiTaRs DAP-CTNNAL1 DAP chr5 10761307 CTNNAL1 chr9 111710492 Exonic hg19 NA DA656066 Out-of-frame Inter-chr p15.2 q31.3 108344 ChimerSeq ChiTaRs ChiTaRs ENY2-UPF2 ENY2 chr8 110352793 UPF2 chr10 12077065 Exonic hg19 NA BU567506 Out-of-frame Inter-chr q23.1 p14 108345 ChimerSeq ChiTaRs ChiTaRs RABGAP1-MLPH RABGAP1 chr9 125866666 MLPH chr2 238395894 Exonic hg19 NA DB166164 Out-of-frame Inter-chr q33.2 q37.3 108346 ChimerSeq ChiTaRs ChiTaRs CDH18-PHF14 CDH18 chr5 20575972 PHF14 chr7 11150974 Exonic hg19 NA DA092156 Out-of-frame Inter-chr p14.3 p21.3 108347 ChimerSeq ChiTaRs ChiTaRs RPLP2-CALR RPLP2 chr11 812873 CALR chr19 13051583 Exonic hg19 NA CA425105 Out-of-frame Inter-chr p15.5 p13.13 108348 ChimerSeq ChiTaRs ChiTaRs SNHG12-SRRT SNHG12 chr1 28908369 SRRT chr7 100485690 Exonic hg19 NA R73443 Out-of-frame Inter-chr p35.3 q22.1 108349 ChimerSeq ChiTaRs ChiTaRs LONRF2-CLU LONRF2 chr2 100891261 CLU chr8 27455513 Exonic hg19 NA AV727212 Out-of-frame Inter-chr q11.2 p21.1 Tumor suppressor gene 108350 ChimerSeq ChiTaRs ChiTaRs TBC1D19-MON2 TBC1D19 chr4 26622310 MON2 chr12 62902064 Exonic hg19 NA DB119021 Out-of-frame Inter-chr p15.2 q14.1 108351 ChimerSeq ChiTaRs ChiTaRs LONRF2-USMG5 LONRF2 chr2 100894750 USMG5 chr10 105151947 Exonic hg19 NA CK004850 3'UTR-3'UTR Inter-chr q11.2 q24.33 108352 ChimerSeq ChiTaRs ChiTaRs INTS9-CDK16 INTS9 chr8 28691815 CDK16 chrX 47078467 Exonic hg19 NA X66363 Out-of-frame Inter-chr p21.1 p11.3 108353 ChimerSeq ChiTaRs ChiTaRs CHCHD4-BIRC6 CHCHD4 chr3 14166256 BIRC6 chr2 32664585 Exonic hg19 NA DA459346 Out-of-frame Inter-chr p25.1 p22.3 108354 ChimerSeq ChiTaRs ChiTaRs RNU11-GRN RNU11 chr1 28975229 GRN chr17 42422661 Exonic hg19 NA DA594512 Out-of-frame Inter-chr p35.3 q21.31 108355 ChimerSeq ChiTaRs ChiTaRs CAMK2D-COPS7B CAMK2D chr4 114419979 COPS7B chr2 232646440 Exonic hg19 NA DA353944 Out-of-frame Inter-chr q26 q37.1 108356 ChimerSeq ChiTaRs ChiTaRs CAMSAP2-ANKRD36 CAMSAP2 chr1 200827036 ANKRD36 chr2 97879277 Exonic hg19 NA BU567810 Out-of-frame Inter-chr q32.1 q11.2 108357 ChimerSeq ChiTaRs ChiTaRs ABCA1-EIF4E ABCA1 chr9 107589344 EIF4E chr4 99809803 Exonic hg19 NA BF879888 Out-of-frame Inter-chr q31.1 q23 108358 ChimerSeq ChiTaRs ChiTaRs B3GAT3-SLC8A3 B3GAT3 chr11 62389397 SLC8A3 chr14 70513747 Exonic hg19 NA BX107986 Out-of-frame Inter-chr q12.3 q24.2 108359 ChimerSeq ChiTaRs ChiTaRs SORBS1-SPOP SORBS1 chr10 97321158 SPOP chr17 47696433 Exonic hg19 NA DB256869 Out-of-frame Inter-chr q24.1 q21.33 Oncogene Tumor suppressor gene 108360 ChimerSeq ChiTaRs ChiTaRs TMEM38B-VAPA TMEM38B chr9 108537390 VAPA chr18 9931864 Exonic hg19 NA AU117419 Out-of-frame Inter-chr q31.2 p11.22 108361 ChimerSeq ChiTaRs ChiTaRs PHF15-AKR1B1 PHF15 chr5 133871576 AKR1B1 chr7 134127108 Exonic hg19 NA AV701562 Out-of-frame Inter-chr q33 Tumor suppressor gene 108362 ChimerSeq ChiTaRs ChiTaRs STK17A-TMEM123 STK17A chr7 43665335 TMEM123 chr11 102267771 Exonic hg19 NA CN282882 Out-of-frame Inter-chr p13 q22.2 108363 ChimerSeq ChiTaRs ChiTaRs MDH2-LOC100507412 MDH2 chr7 75684260 LOC100507412 chr? 109556 Exonic hg19 NA BP259062 Out-of-frame Inter-chr q11.23 108364 ChimerSeq ChiTaRs ChiTaRs BDH1-UBR3 BDH1 chr3 197249600 UBR3 chr2 170938234 Exonic hg19 NA BF679324 Out-of-frame Inter-chr q31.1 108365 ChimerSeq ChiTaRs ChiTaRs PTPRG-PRPF4B PTPRG chr3 61728289 PRPF4B chr6 4047453 Exonic hg19 NA AW803010 Out-of-frame Inter-chr p14.2 p25.2 108366 ChimerSeq ChiTaRs ChiTaRs EPHA5-KPNA4 EPHA5 chr4 66439405 KPNA4 chr3 160219134 Exonic hg19 NA BM828717 Out-of-frame Inter-chr q13.2 Oncogene q25.33 108367 ChimerSeq ChiTaRs ChiTaRs RPS6-POSTN RPS6 chr9 19376587 POSTN chr13 38137332 Exonic hg19 NA AA026363 Out-of-frame Inter-chr p22.1 q13.3 108368 ChimerSeq ChiTaRs ChiTaRs FBXL4-GOPC FBXL4 chr6 99323537 GOPC chr6 117883604 Exonic hg19 NA BF086751 Out-of-frame Intra-chr q16.2 q22.1 108369 ChimerSeq ChiTaRs ChiTaRs RPL11-STRN4 RPL11 chr1 24022367 STRN4 chr19 47226479 Exonic hg19 NA AU134575 Out-of-frame Inter-chr p36.11 Tumor suppressor gene q13.32 108370 ChimerSeq ChiTaRs ChiTaRs LOC100129931-HLA-DPA1 LOC100129931 chr4 7043223 HLA-DPA1 chr6 4518058 Exonic hg19 NA AW449605 Out-of-frame Inter-chr 108371 ChimerSeq ChiTaRs ChiTaRs PORCN-CAND1 PORCN chrX 48379196 CAND1 chr12 67699175 Exonic hg19 NA BQ772375 Out-of-frame Inter-chr p11.23 q14.3 108372 ChimerSeq ChiTaRs ChiTaRs ZFHX4-GRM7 ZFHX4 chr8 77779521 GRM7 chr3 7288781 Exonic hg19 NA AV730988 3'UTR-CDS Inter-chr q21.13 Transcription factor p26.1 108373 ChimerSeq ChiTaRs ChiTaRs MRPL43-FAM127A MRPL43 chr10 102746220 FAM127A chrX 134166476 Exonic hg19 NA BF112045 Out-of-frame Inter-chr q24.31 108374 ChimerSeq ChiTaRs ChiTaRs KCNQ1-HGSNAT KCNQ1 chr11 2696625 HGSNAT chr8 43055606 Exonic hg19 NA T20200 Out-of-frame Inter-chr p15.5 p11.21 108375 ChimerSeq ChiTaRs ChiTaRs CCDC80-SMTN CCDC80 chr3 112359819 SMTN chr22 31495072 Exonic hg19 NA BQ181664 Out-of-frame Inter-chr q13.2 q12.2 108376 ChimerSeq ChiTaRs ChiTaRs CLU-MAP2K2 CLU chr8 27468111 MAP2K2 chr19 4101022 Exonic hg19 NA BF920101 Out-of-frame Inter-chr p21.1 Tumor suppressor gene p13.3 STE:STE7 Oncogene 108377 ChimerSeq ChiTaRs ChiTaRs DFNA5-SCRN1 DFNA5 chr7 24797038 SCRN1 chr7 29994922 Exonic hg19 NA DA314001 Out-of-frame Intra-chr p15.3 Tumor suppressor gene p14.3 108378 ChimerSeq ChiTaRs ChiTaRs NDUFS6-GNAS NDUFS6 chr5 1816162 GNAS chr20 57485431 Exonic hg19 NA CA433888 Out-of-frame Inter-chr p15.33 q13.32 Oncogene 108379 ChimerSeq ChiTaRs ChiTaRs PEBP4-APLF PEBP4 chr8 22755307 APLF chr2 68794472 Exonic hg19 NA DB089296 Out-of-frame Inter-chr p21.3 p13.3 108380 ChimerSeq ChiTaRs ChiTaRs RPS4X-AHSA1 RPS4X chrX 71495001 AHSA1 chr14 77935503 Exonic hg19 NA BQ305779 Out-of-frame Inter-chr q13.1 q24.3 108381 ChimerSeq ChiTaRs ChiTaRs FKBP6-RNF167 FKBP6 chr7 72722813 RNF167 chr17 4844166 Exonic hg19 NA DA679431 Out-of-frame Inter-chr q11.23 p13.2 108382 ChimerSeq ChiTaRs ChiTaRs KPNA4-ANO10 KPNA4 chr3 160219650 ANO10 chr3 43407832 Exonic hg19 NA AK001237 Out-of-frame Intra-chr q25.33 p21.33 108383 ChimerSeq ChiTaRs ChiTaRs WDR53-RNU5E-1 WDR53 chr3 196294127 RNU5E-1 chr5 80533380 Exonic hg19 NA BC007768 Out-of-frame Inter-chr q29 p36.22 108384 ChimerSeq ChiTaRs ChiTaRs GJA1-TELO2 GJA1 chr6 121768404 TELO2 chr16 1560431 Exonic hg19 NA AB209020 Out-of-frame Inter-chr q22.31 Tumor suppressor gene p13.3 108385 ChimerSeq ChiTaRs ChiTaRs SST-NASP SST chr3 187386794 NASP chr1 46049819 Exonic hg19 NA CA946867 Out-of-frame Inter-chr q27.3 p34.1 108386 ChimerSeq ChiTaRs ChiTaRs AEBP1-WDR26 AEBP1 chr7 44154159 WDR26 chr1 224576726 Exonic hg19 NA CA441028 5'UTR-3'UTR Inter-chr p13 Transcription factor q42.12 108387 ChimerSeq ChiTaRs ChiTaRs CCDC88A-RPL37A CCDC88A chr2 55555532 RPL37A chr2 217366095 Exonic hg19 NA AK001254 Out-of-frame Intra-chr p16.1 q35 108388 ChimerSeq ChiTaRs ChiTaRs RXRB-ZFPL1 RXRB chr6 4396341 ZFPL1 chr11 64855814 Exonic hg19 NA CB052570 Out-of-frame Inter-chr Transcription factor q13.1 108389 ChimerSeq ChiTaRs ChiTaRs ABCA2-HIRA ABCA2 chr9 139918178 HIRA chr22 19430892 Exonic hg19 NA BC072437 Out-of-frame Inter-chr q34.3 q11.21 Tumor suppressor gene 108390 ChimerSeq ChiTaRs ChiTaRs PAPPA-DDX25 PAPPA chr9 119024501 DDX25 chr11 125774403 Exonic hg19 NA DB057466 Out-of-frame Inter-chr q33.1 q24.2 108391 ChimerSeq ChiTaRs ChiTaRs TMOD1-DAPK2 TMOD1 chr9 100363524 DAPK2 chr15 64199416 Exonic hg19 NA BQ359645 Out-of-frame Inter-chr q22.33 q22.31 CAMK:DAPK Tumor suppressor gene 108392 ChimerSeq ChiTaRs ChiTaRs POMC-STK16 POMC chr2 25391423 STK16 chr2 220110425 Exonic hg19 NA AV750716 Out-of-frame Intra-chr p23.3 q35 108393 ChimerSeq ChiTaRs ChiTaRs ASNSD1-SUPT6H ASNSD1 chr2 190526339 SUPT6H chr17 27020712 Exonic hg19 NA BC073963 Out-of-frame Inter-chr q32.2 q11.2 108394 ChimerSeq ChiTaRs ChiTaRs IFITM2-NMI IFITM2 chr11 309395 NMI chr2 152127296 Exonic hg19 NA CB529308 Out-of-frame Inter-chr p15.5 q23.3 108395 ChimerSeq ChiTaRs ChiTaRs EMX1-TARS2 EMX1 chr2 73163200 TARS2 chr1 150478152 Exonic hg19 NA AK092368 Out-of-frame Inter-chr p13.2 Transcription factor q21.2 108396 ChimerSeq ChiTaRs ChiTaRs DDOST-ITPKC DDOST chr1 20979402 ITPKC chr19 41227551 Exonic hg19 NA BF572086 Out-of-frame Inter-chr p36.12 q13.2 108397 ChimerSeq ChiTaRs ChiTaRs HIVEP3-SLC3A1 HIVEP3 chr1 42489017 SLC3A1 chr2 44545537 Exonic hg19 NA AI830739 Out-of-frame Inter-chr p34.2 Tumor suppressor gene Transcription factor p21 108398 ChimerSeq ChiTaRs ChiTaRs HLA-DPA1-NEAT1 HLA-DPA1 chr6 4521825 NEAT1 chr11 65191168 Exonic hg19 NA DB013913 Out-of-frame Inter-chr q13.1 108399 ChimerSeq ChiTaRs ChiTaRs FHIT-UBC FHIT chr3 60337352 UBC chr12 125398136 Exonic hg19 NA DA646434 Out-of-frame Inter-chr p14.2 Tumor suppressor gene q24.31 108400 ChimerSeq ChiTaRs ChiTaRs NPR2-ATHL1 NPR2 chr9 35809716 ATHL1 chr11 290940 Exonic hg19 NA BQ771511 Out-of-frame Inter-chr p13.3 Tumor suppressor gene 108401 ChimerSeq ChiTaRs ChiTaRs ASPH-VAT1 ASPH chr8 62596762 VAT1 chr17 41166760 Exonic hg19 NA DW407831 Out-of-frame Inter-chr q12.3 q21.31 108402 ChimerSeq ChiTaRs ChiTaRs IL31RA-KRCC1 IL31RA chr5 55206445 KRCC1 chr2 88328167 Exonic hg19 NA AF106913 Out-of-frame Inter-chr q11.2 p11.2 108403 ChimerSeq ChiTaRs ChiTaRs EXTL2-MAX EXTL2 chr1 101360399 MAX chr14 65543259 Exonic hg19 NA DA644341 Out-of-frame Inter-chr p21.2 Tumor suppressor gene q23.3 Oncogene Tumor suppressor gene Transcription factor 108404 ChimerSeq ChiTaRs ChiTaRs VSIG1-RPS3 VSIG1 chrX 107322131 RPS3 chr11 75110563 Exonic hg19 NA BM823567 Out-of-frame Inter-chr q22.3 q13.4 108405 ChimerSeq ChiTaRs ChiTaRs EIF3M-PPIE EIF3M chr11 32608616 PPIE chr1 40219177 Exonic hg19 NA BP428638 Out-of-frame Inter-chr p13 p34.2 108406 ChimerSeq ChiTaRs ChiTaRs SUMF1-LRRFIP2 SUMF1 chr3 4418063 LRRFIP2 chr3 37170566 Exonic hg19 NA XX000010 Out-of-frame Intra-chr p26.1 p22.2 108407 ChimerSeq ChiTaRs ChiTaRs TG-ITGAX TG chr8 134054834 ITGAX chr16 31384629 Exonic hg19 NA BF810597 Out-of-frame Inter-chr q24.22 p11.2 108408 ChimerSeq ChiTaRs ChiTaRs HIST1H4A-DLGAP1 HIST1H4A chr6 26022275 DLGAP1 chr18 4159641 Exonic hg19 NA BM749204 Out-of-frame Inter-chr p22.2 p11.31 108409 ChimerSeq ChiTaRs ChiTaRs KLF11-DCP2 KLF11 chr2 10193878 DCP2 chr5 112354215 Exonic hg19 NA AK025019 Out-of-frame Inter-chr p25.1 Transcription factor q22.2 108410 ChimerSeq ChiTaRs ChiTaRs CRP-SEPHS2 CRP chr1 159683212 SEPHS2 chr16 30456286 Exonic hg19 NA AA344463 Out-of-frame Inter-chr q23.2 p11.2 108411 ChimerSeq ChiTaRs ChiTaRs HSPG2-MOV10 HSPG2 chr1 22212997 MOV10 chr1 113242372 Exonic hg19 NA CD676182 Out-of-frame Intra-chr p36.12 p13.2 108412 ChimerSeq ChiTaRs ChiTaRs PTPN13-TUBA1A PTPN13 chr4 87622475 TUBA1A chr12 49580508 Exonic hg19 NA AU099292 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q13.12 108413 ChimerSeq ChiTaRs ChiTaRs SMAP2-CCT7 SMAP2 chr1 40887836 CCT7 chr2 73479862 Exonic hg19 NA BM423518 Out-of-frame Inter-chr p34.2 p13.2 108414 ChimerSeq ChiTaRs ChiTaRs GNB2L1-GSK3B GNB2L1 chr5 180664720 GSK3B chr3 119762838 Exonic hg19 NA BF986541 Out-of-frame Inter-chr Tumor suppressor gene q13.33 CMGC:GSK Tumor suppressor gene 108415 ChimerSeq ChiTaRs ChiTaRs CLU-MAP2K2 CLU chr8 27468112 MAP2K2 chr19 4100962 Exonic hg19 NA BF919979 Out-of-frame Inter-chr p21.1 Tumor suppressor gene p13.3 STE:STE7 Oncogene 108416 ChimerSeq ChiTaRs ChiTaRs PCMTD1-DCDC2 PCMTD1 chr8 52811574 DCDC2 chr6 24357745 Exonic hg19 NA BG751895 Out-of-frame Inter-chr q11.23 p22.3 Tumor suppressor gene 108417 ChimerSeq ChiTaRs ChiTaRs ATP6V0B-DECR1 ATP6V0B chr1 44443958 DECR1 chr8 91063913 Exonic hg19 NA BQ306273 Out-of-frame Inter-chr p34.1 q21.3 108418 ChimerSeq ChiTaRs ChiTaRs ZZZ3-PTPRB ZZZ3 chr1 78079992 PTPRB chr12 70964986 Exonic hg19 NA DA854786 Out-of-frame Inter-chr p31.1 Transcription factor q15 108419 ChimerSeq ChiTaRs ChiTaRs ROBO1-GPR162 ROBO1 chr3 79068609 GPR162 chr12 6932783 Exonic hg19 NA DA769291 5'UTR-5'UTR Inter-chr p12.3 Tumor suppressor gene p13.31 108420 ChimerSeq ChiTaRs ChiTaRs PNPLA1-KCTD10 PNPLA1 chr6 36275488 KCTD10 chr12 109886819 Exonic hg19 NA BG218677 Out-of-frame Inter-chr p21.31 q24.11 108421 ChimerSeq ChiTaRs ChiTaRs PPM1G-DDX25 PPM1G chr2 27604190 DDX25 chr11 125775107 Exonic hg19 NA AI954747 Out-of-frame Inter-chr p23.3 q24.2 108422 ChimerSeq ChiTaRs ChiTaRs ADAMTS12-AKAP13 ADAMTS12 chr5 33770785 AKAP13 chr15 86292137 Exonic hg19 NA AI279570 Out-of-frame Inter-chr p13.2 q25.3 108423 ChimerSeq ChiTaRs ChiTaRs KCNN3-PDLIM1 KCNN3 chr1 154837852 PDLIM1 chr10 97006973 Exonic hg19 NA CD386038 Out-of-frame Inter-chr q21.3 q23.33 108424 ChimerSeq ChiTaRs ChiTaRs RPL10-POLA1 RPL10 chrX 153627842 POLA1 chrX 24806747 Exonic hg19 NA DW421192 Out-of-frame Intra-chr q28 Tumor suppressor gene p22.11 108425 ChimerSeq ChiTaRs ChiTaRs PDE4D-AGPAT4 PDE4D chr5 59129636 AGPAT4 chr6 161587303 Exonic hg19 NA DA282561 Out-of-frame Inter-chr q12.1 q26 108426 ChimerSeq ChiTaRs ChiTaRs RTN4-ENTPD1 RTN4 chr2 55199752 ENTPD1 chr10 97515920 Exonic hg19 NA DA313964 Out-of-frame Inter-chr p16.1 Tumor suppressor gene q24.1 108427 ChimerSeq ChiTaRs ChiTaRs SHISA5-SERINC3 SHISA5 chr3 48514487 SERINC3 chr20 43126303 Exonic hg19 NA BQ369260 Out-of-frame Inter-chr p21.31 q13.12 108428 ChimerSeq ChiTaRs ChiTaRs PRICKLE2-TCEA3 PRICKLE2 chr3 64084597 TCEA3 chr1 23707860 Exonic hg19 NA BG164187 Out-of-frame Inter-chr p14.1 108429 ChimerSeq ChiTaRs ChiTaRs UQCRHL-RHOC UQCRHL chr1 16134191 RHOC chr1 113243902 Exonic hg19 NA H19787 Out-of-frame Intra-chr p36.21 p13.2 108430 ChimerSeq ChiTaRs ChiTaRs RERE-TTR RERE chr1 8564230 TTR chr18 29172939 Exonic hg19 NA CD102904 Out-of-frame Inter-chr p36.23 q12.1 108431 ChimerSeq ChiTaRs ChiTaRs GUF1-LOC100507412 GUF1 chr4 44693758 LOC100507412 chr? 117535 Exonic hg19 NA BE077168 Out-of-frame Inter-chr p12 108432 ChimerSeq ChiTaRs ChiTaRs PSPH-ITCH PSPH chr7 56131097 ITCH chr20 33096817 Exonic hg19 NA BX101324 Out-of-frame Inter-chr p11.2 q11.22 108433 ChimerSeq ChiTaRs ChiTaRs SEC31A-ARPC5 SEC31A chr4 83745811 ARPC5 chr1 183602237 Exonic hg19 NA BM992139 Out-of-frame Inter-chr q21.22 q25.3 108434 ChimerSeq ChiTaRs ChiTaRs ADCY2-LARP1B ADCY2 chr1 152005172 LARP1B chr4 129029326 Exonic hg19 NA AW962618 Out-of-frame Inter-chr p15.31 q28.2 108435 ChimerSeq ChiTaRs ChiTaRs ABCA1-KCNMA1 ABCA1 chr9 107690436 KCNMA1 chr10 78850187 Exonic hg19 NA DB286350 Out-of-frame Inter-chr q31.1 q22.3 108436 ChimerSeq ChiTaRs ChiTaRs RPS4X-SUPT5H RPS4X chrX 71492541 SUPT5H chr19 39962318 Exonic hg19 NA AW015878 Out-of-frame Inter-chr q13.1 q13.2 108437 ChimerSeq ChiTaRs ChiTaRs NDUFA4-RTN3 NDUFA4 chr7 10973249 RTN3 chr11 63448972 Exonic hg19 NA DA146680 Out-of-frame Inter-chr p21.3 q13.1 108438 ChimerSeq ChiTaRs ChiTaRs MAP4-KANK4 MAP4 chr3 48130308 KANK4 chr1 62734125 Exonic hg19 NA CN395192 Out-of-frame Inter-chr p21.31 p31.3 108439 ChimerSeq ChiTaRs ChiTaRs TGFBI-MYH9 TGFBI chr5 135385193 MYH9 chr22 36690992 Exonic hg19 NA BI058885 Out-of-frame Inter-chr q31.1 Tumor suppressor gene q12.3 Oncogene Tumor suppressor gene 108440 ChimerSeq ChiTaRs ChiTaRs RIMS3-CCT7 RIMS3 chr1 41088817 CCT7 chr2 73474958 Exonic hg19 NA AW410065 Out-of-frame Inter-chr p34.2 p13.2 108441 ChimerSeq ChiTaRs ChiTaRs FGFR1-WNK1 FGFR1 chr8 38275438 WNK1 chr12 970178 Exonic hg19 NA BQ375865 Out-of-frame Inter-chr p11.23 TK:FGFR Oncogene p13.33 108442 ChimerSeq ChiTaRs ChiTaRs SLC20A1-TOMM20 SLC20A1 chr2 113403668 TOMM20 chr1 235275145 Exonic hg19 NA BI561585 Out-of-frame Inter-chr q14.1 q42.3 108443 ChimerSeq ChiTaRs ChiTaRs PWWP2A-AKIP1 PWWP2A chr5 159525192 AKIP1 chr11 8941623 Exonic hg19 NA AK074455 Out-of-frame Inter-chr q33.3 p15.4 108444 ChimerSeq ChiTaRs ChiTaRs EIF4G2-HIAT1 EIF4G2 chr11 10821816 HIAT1 chr1 100541524 Exonic hg19 NA BF996804 Out-of-frame Inter-chr p15.4 108445 ChimerSeq ChiTaRs ChiTaRs RRP12-LOC100507412 RRP12 chr10 99161043 LOC100507412 chr? 109584 Exonic hg19 NA DA453657 Out-of-frame Inter-chr q24.1 108446 ChimerSeq ChiTaRs ChiTaRs C2orf61-UCP2 C2orf61 chr2 47403650 UCP2 chr11 73693832 Exonic hg19 NA BM827779 Out-of-frame Inter-chr q13.4 108447 ChimerSeq ChiTaRs ChiTaRs AFAP1-RET AFAP1 chr4 7941574 RET chr10 43612031 Exonic hg19 NA X56348 5'UTR-CDS Inter-chr p16.1 q11.21 TK:Ret Oncogene 108448 ChimerSeq ChiTaRs ChiTaRs PCSK1-TADA3 PCSK1 chr5 95759036 TADA3 chr3 9821653 Exonic hg19 NA BU948504 CDS-3'UTR Inter-chr q15 p25.3 108449 ChimerSeq ChiTaRs ChiTaRs ARAP3-BSDC1 ARAP3 chr5 141036204 BSDC1 chr1 32834845 Exonic hg19 NA BQ335833 Out-of-frame Inter-chr q31.3 p35.1 108450 ChimerSeq ChiTaRs ChiTaRs REV3L-NDUFS3 REV3L chr6 111621131 NDUFS3 chr11 47602436 Exonic hg19 NA BG254036 Out-of-frame Inter-chr q21 p11.2 108451 ChimerSeq ChiTaRs ChiTaRs ATP5J2-PTCD1-NMT2 ATP5J2-PTCD1 chr7 99057774 NMT2 chr10 15154874 Exonic hg19 NA AA085790 Out-of-frame Inter-chr q22.1 p13 108452 ChimerSeq ChiTaRs ChiTaRs RRP12-PIGR RRP12 chr10 99153518 PIGR chr1 207101867 Exonic hg19 NA AK000238 Out-of-frame Inter-chr q24.1 q32.1 108453 ChimerSeq ChiTaRs ChiTaRs XIST-COPB2 XIST chrX 73065394 COPB2 chr3 139085514 Exonic hg19 NA DA812494 Out-of-frame Inter-chr q13.2 Tumor suppressor gene q23 108454 ChimerSeq ChiTaRs ChiTaRs ADIPOQ-PCNT ADIPOQ chr3 186576252 PCNT chr21 47851502 Exonic hg19 NA BU615971 3'UTR-CDS Inter-chr q27.3 q22.3 108455 ChimerSeq ChiTaRs ChiTaRs NUP160-GLOD4 NUP160 chr11 47823452 GLOD4 chr17 662715 Exonic hg19 NA BG504940 Out-of-frame Inter-chr p11.2 p13.3 108456 ChimerSeq ChiTaRs ChiTaRs ACTR8-NDUFC2-KCTD14 ACTR8 chr3 53916179 NDUFC2-KCTD14 chr11 77781028 Exonic hg19 NA CB109362 Out-of-frame Inter-chr p21.1 q14.1 108457 ChimerSeq ChiTaRs ChiTaRs TXNDC5-PXK TXNDC5 chr6 7894980 PXK chr3 58380713 Exonic hg19 NA BF445488 Out-of-frame Inter-chr p24.3 p14.3 108458 ChimerSeq ChiTaRs ChiTaRs ANAPC1-CLK1 ANAPC1 chr2 112595897 CLK1 chr2 201718625 Exonic hg19 NA AF212224 CDS-3'UTR Intra-chr q13 Tumor suppressor gene q33.1 CMGC:CLK 108459 ChimerSeq ChiTaRs ChiTaRs PAIP1-HSP90AA1 PAIP1 chr5 43543212 HSP90AA1 chr14 102550822 Exonic hg19 NA BM709680 Out-of-frame Inter-chr p12 q32.31 Oncogene 108460 ChimerSeq ChiTaRs ChiTaRs CALD1-LPHN3 CALD1 chr7 134654401 LPHN3 chr4 62936778 Exonic hg19 NA BG010620 Out-of-frame Inter-chr q33 108461 ChimerSeq ChiTaRs ChiTaRs SLC4A10-ARL13B SLC4A10 chr2 162696386 ARL13B chr3 93722615 Exonic hg19 NA BQ338030 Out-of-frame Inter-chr q24.2 q11.1 108462 ChimerSeq ChiTaRs ChiTaRs PRKCD-TFIP11 PRKCD chr3 53226668 TFIP11 chr22 26902770 Exonic hg19 NA CA309863 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q12.1 108463 ChimerSeq ChiTaRs ChiTaRs ACTB-LOC100507412 ACTB chr7 5570232 LOC100507412 chr? 117691 Exonic hg19 NA BP309743 3'UTR-5'UTR Inter-chr p22.1 108464 ChimerSeq ChiTaRs ChiTaRs GAS5-DHCR24 GAS5 chr1 173833579 DHCR24 chr1 55316353 Exonic hg19 NA DB244252 Out-of-frame Intra-chr q25.1 Tumor suppressor gene p32.3 108465 ChimerSeq ChiTaRs ChiTaRs MRPL15-FAM72A MRPL15 chr8 55049117 FAM72A chr1 206154031 Exonic hg19 NA BF243265 Out-of-frame Inter-chr q11.23 q32.1 108466 ChimerSeq ChiTaRs ChiTaRs EXOC4-TGFB1 EXOC4 chr7 133697049 TGFB1 chr19 41856917 Exonic hg19 NA BE170483 Out-of-frame Inter-chr q33 q13.2 Tumor suppressor gene 108467 ChimerSeq ChiTaRs ChiTaRs HPS6-STX16 HPS6 chr10 103825750 STX16 chr20 57251520 Exonic hg19 NA AI655600 Out-of-frame Inter-chr q24.32 q13.32 108468 ChimerSeq ChiTaRs ChiTaRs C4orf46-FAM188A C4orf46 chr4 159593003 FAM188A chr10 15820843 Exonic hg19 NA BF695980 Out-of-frame Inter-chr q32.1 Tumor suppressor gene 108469 ChimerSeq ChiTaRs ChiTaRs EVC-P2RX7 EVC chr4 5814952 P2RX7 chr12 121622850 Exonic hg19 NA N28327 Out-of-frame Inter-chr p16.2 q24.31 108470 ChimerSeq ChiTaRs ChiTaRs MICAL2-LPO MICAL2 chr11 12183966 LPO chr17 56329541 Exonic hg19 NA BI831720 CDS-5'UTR Inter-chr p15.3 q22 108471 ChimerSeq ChiTaRs ChiTaRs CD164-SLC20A1 CD164 chr6 109687835 SLC20A1 chr2 113421204 Exonic hg19 NA BI032053 Out-of-frame Inter-chr q21 q14.1 108472 ChimerSeq ChiTaRs ChiTaRs PARP15-MAT2A PARP15 chr3 122305587 MAT2A chr2 85769284 Exonic hg19 NA BM823880 Out-of-frame Inter-chr q21.1 p11.2 Tumor suppressor gene 108473 ChimerSeq ChiTaRs ChiTaRs TMEM175-BAG6 TMEM175 chr4 952444 BAG6 chr6 2939433 Exonic hg19 NA CK300020 Out-of-frame Inter-chr p16.3 p21.33 108474 ChimerSeq ChiTaRs ChiTaRs NBPF11-CDC42BPB NBPF11 chr1 148196111 CDC42BPB chr14 103406011 Exonic hg19 NA CK299588 Out-of-frame Inter-chr q21.2 q32.32 108475 ChimerSeq ChiTaRs ChiTaRs AGFG1-PVRL3 AGFG1 chr2 228337304 PVRL3 chr3 110911198 Exonic hg19 NA BF059236 Out-of-frame Inter-chr q36.3 108476 ChimerSeq ChiTaRs ChiTaRs NSMCE2-ZEB2 NSMCE2 chr8 126379771 ZEB2 chr2 145270260 Exonic hg19 NA W80755 Out-of-frame Inter-chr q24.13 q22.3 Transcription factor 108477 ChimerSeq ChiTaRs ChiTaRs WDR74-GALC WDR74 chr11 62609281 GALC chr14 88450801 Exonic hg19 NA DA803568 Out-of-frame Inter-chr q12.3 q31.3 108478 ChimerSeq ChiTaRs ChiTaRs DDB1-ADCY2 DDB1 chr11 61067031 ADCY2 chr1 152005067 Exonic hg19 NA AI079657 Out-of-frame Inter-chr q12.2 p15.31 108479 ChimerSeq ChiTaRs ChiTaRs CEP63-GOLGB1 CEP63 chr3 134280609 GOLGB1 chr3 121409517 Exonic hg19 NA BQ181358 Out-of-frame Intra-chr q22.2 q13.33 108480 ChimerSeq ChiTaRs ChiTaRs UBE2Q1-ATP2A2 UBE2Q1 chr1 154522512 ATP2A2 chr12 110765531 Exonic hg19 NA AA431335 Out-of-frame Inter-chr q21.3 q24.11 108481 ChimerSeq ChiTaRs ChiTaRs HADH-NCL HADH chr4 108955491 NCL chr2 232322352 Exonic hg19 NA BF348759 Out-of-frame Inter-chr q25 q37.1 108482 ChimerSeq ChiTaRs ChiTaRs SSR1-AVL9 SSR1 chr6 7284737 AVL9 chr7 33042369 Exonic hg19 NA BF818212 Out-of-frame Inter-chr p24.3 p14.3 108483 ChimerSeq ChiTaRs ChiTaRs PPP2R2A-PCMTD1 PPP2R2A chr8 26151258 PCMTD1 chr8 52733190 Exonic hg19 NA CB988238 Out-of-frame Intra-chr p21.2 q11.23 108484 ChimerSeq ChiTaRs ChiTaRs EPAS1-HNRNPA2B1 EPAS1 chr2 46524791 HNRNPA2B1 chr7 26237240 Exonic hg19 NA DA843244 Out-of-frame Inter-chr p21 Tumor suppressor gene Transcription factor p15.2 108485 ChimerSeq ChiTaRs ChiTaRs MRPL9-NCAM1 MRPL9 chr1 151735810 NCAM1 chr11 113148979 Exonic hg19 NA AA702716 Out-of-frame Inter-chr q21.3 q23.2 108486 ChimerSeq ChiTaRs ChiTaRs LPPR4-SENP2 LPPR4 chr1 99772391 SENP2 chr3 185348103 Exonic hg19 NA AK297417 Out-of-frame Inter-chr q27.2 108487 ChimerSeq ChiTaRs ChiTaRs CDKAL1-CNNM4 CDKAL1 chr6 20548923 CNNM4 chr2 97427351 Exonic hg19 NA BP350154 Out-of-frame Inter-chr p22.3 q11.2 108488 ChimerSeq ChiTaRs ChiTaRs KDM5C-UBTD2 KDM5C chrX 53244012 UBTD2 chr5 171636661 Exonic hg19 NA BU196640 Out-of-frame Inter-chr p11.22 Oncogene q35.1 108489 ChimerSeq ChiTaRs ChiTaRs NCBP1-ECT2 NCBP1 chr9 100433710 ECT2 chr3 172525650 Exonic hg19 NA BP238447 Out-of-frame Inter-chr q22.33 q26.31 Tumor suppressor gene 108490 ChimerSeq ChiTaRs ChiTaRs MLLT10-PICALM MLLT10 chr10 21827841 PICALM chr11 85670030 Exonic hg19 NA AF060931 CDS-3'UTR Inter-chr p12.31 Oncogene q14.2 KB Pub Seq+ 108491 ChimerSeq ChiTaRs ChiTaRs ASPH-PAPPA ASPH chr8 62537289 PAPPA chr9 119161901 Exonic hg19 NA W31324 Out-of-frame Inter-chr q12.3 q33.1 108492 ChimerSeq ChiTaRs ChiTaRs BCAP31-SMAD2 BCAP31 chrX 152988704 SMAD2 chr18 45372063 Exonic hg19 NA BQ375829 Out-of-frame Inter-chr q28 q21.1 Oncogene Tumor suppressor gene 108493 ChimerSeq ChiTaRs ChiTaRs YWHAQ-DDX5 YWHAQ chr2 9724992 DDX5 chr17 62502192 Exonic hg19 NA AU098877 Out-of-frame Inter-chr p25.1 q23.3 108494 ChimerSeq ChiTaRs ChiTaRs EZR-ANP32B EZR chr6 159205761 ANP32B chr9 100773628 Exonic hg19 NA BF817728 Out-of-frame Inter-chr q25.3 q22.33 108495 ChimerSeq ChiTaRs ChiTaRs HNRNPR-MEF2C HNRNPR chr1 23670843 MEF2C chr5 88016646 Exonic hg19 NA BG613451 Out-of-frame Inter-chr q14.3 Transcription factor 108496 ChimerSeq ChiTaRs ChiTaRs ATP6V1C1-RAB2A ATP6V1C1 chr8 104033455 RAB2A chr8 61471410 Exonic hg19 NA DA594015 5'UTR-CDS Intra-chr q22.3 q12.1 108497 ChimerSeq ChiTaRs ChiTaRs CHCHD4-CAV1 CHCHD4 chr3 14153716 CAV1 chr7 116200112 Exonic hg19 NA BF476043 Out-of-frame Inter-chr p25.1 q31.2 Tumor suppressor gene 108498 ChimerSeq ChiTaRs ChiTaRs SMCP-C9orf43 SMCP chr1 152857043 C9orf43 chr9 116173207 Exonic hg19 NA DB043882 Out-of-frame Inter-chr q21.3 q32 108499 ChimerSeq ChiTaRs ChiTaRs SRM-RPS9 SRM chr1 11116695 RPS9 chr19 54705354 Exonic hg19 NA CD743028 CDS-3'UTR Inter-chr p36.22 TK:Src 108500 ChimerSeq ChiTaRs ChiTaRs GPX1-RPL3 GPX1 chr3 49395489 RPL3 chr22 39709703 Exonic hg19 NA BP429026 Out-of-frame Inter-chr p21.31 q13.1 108501 ChimerSeq ChiTaRs ChiTaRs TRAK1-HES6 TRAK1 chr3 42267094 HES6 chr2 239146908 Exonic hg19 NA BG910237 Out-of-frame Inter-chr p22.1 q37.3 Transcription factor 108502 ChimerSeq ChiTaRs ChiTaRs MDM4-SRGAP3 MDM4 chr1 204501374 SRGAP3 chr3 9100402 Exonic hg19 NA AK223293 5'UTR-CDS Inter-chr q32.1 Oncogene p25.3 Tumor suppressor gene 108503 ChimerSeq ChiTaRs ChiTaRs NDUFA5-FOXN3 NDUFA5 chr7 123181229 FOXN3 chr14 89627824 Exonic hg19 NA R98722 Out-of-frame Inter-chr q31.32 q32.11 Transcription factor 108504 ChimerSeq ChiTaRs ChiTaRs PIP4K2A-RPS6KC1 PIP4K2A chr10 23003452 RPS6KC1 chr1 213415911 Exonic hg19 NA BC036779 5'UTR-CDS Inter-chr p12.2 q32.3 108505 ChimerSeq ChiTaRs ChiTaRs SV2A-CACNA1B SV2A chr1 149875495 CACNA1B chr9 140804142 Exonic hg19 NA T05132 Out-of-frame Inter-chr q21.2 q34.3 108506 ChimerSeq ChiTaRs ChiTaRs HUWE1-PIGT HUWE1 chrX 53711081 PIGT chr20 44044781 Exonic hg19 NA AK123590 Out-of-frame Inter-chr p11.22 q13.12 108507 ChimerSeq ChiTaRs ChiTaRs SARS-COX6A1 SARS chr1 109760790 COX6A1 chr12 120876179 Exonic hg19 NA BG205203 Out-of-frame Inter-chr p13.3 q24.31 108508 ChimerSeq ChiTaRs ChiTaRs EZR-FADS2 EZR chr6 159190908 FADS2 chr11 61634636 Exonic hg19 NA BQ189008 Out-of-frame Inter-chr q25.3 q12.2 108509 ChimerSeq ChiTaRs ChiTaRs ASH2L-BCORL1 ASH2L chr8 37985881 BCORL1 chrX 129168540 Exonic hg19 NA BE929491 Out-of-frame Inter-chr p11.23 q26.1 Tumor suppressor gene 108510 ChimerSeq ChiTaRs ChiTaRs PFKFB3-ECM1 PFKFB3 chr10 6268297 ECM1 chr1 150484160 Exonic hg19 NA BF826291 Out-of-frame Inter-chr p15.1 q21.2 108511 ChimerSeq ChiTaRs ChiTaRs MOSPD2-TBL1X MOSPD2 chrX 14891882 TBL1X chrX 9652079 Exonic hg19 NA BQ436312 Out-of-frame Intra-chr p22.2 p22.31 108512 ChimerSeq ChiTaRs ChiTaRs RPLP2-RPN1 RPLP2 chr11 812873 RPN1 chr3 128339108 Exonic hg19 NA CD370735 Out-of-frame Inter-chr p15.5 q21.3 108513 ChimerSeq ChiTaRs ChiTaRs MGC72080-ZNF320 MGC72080 chr7 97573267 ZNF320 chr19 53397049 Exonic hg19 NA AW816155 Out-of-frame Inter-chr q13.41 Transcription factor 108514 ChimerSeq ChiTaRs ChiTaRs MAGED1-RAB18 MAGED1 chrX 51546216 RAB18 chr10 27815754 Exonic hg19 NA DA944939 Out-of-frame Inter-chr p11.22 p12.1 108515 ChimerSeq ChiTaRs ChiTaRs DPYSL3-ZNF226 DPYSL3 chr5 146772167 ZNF226 chr19 44676239 Exonic hg19 NA BE766358 Out-of-frame Inter-chr q32 q13.31 Transcription factor 108516 ChimerSeq ChiTaRs ChiTaRs CCAR1-PAWR CCAR1 chr10 70546400 PAWR chr12 79988127 Exonic hg19 NA AW391549 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q21.2 Tumor suppressor gene 108517 ChimerSeq ChiTaRs ChiTaRs IARS-IFT46 IARS chr9 95027402 IFT46 chr11 118430502 Exonic hg19 NA BE559985 Out-of-frame Inter-chr q22.31 q23.3 108518 ChimerSeq ChiTaRs ChiTaRs FAM126A-TRO FAM126A chr7 22984145 TRO chrX 54957747 Exonic hg19 NA DA805483 Out-of-frame Inter-chr p15.3 p11.21 108519 ChimerSeq ChiTaRs ChiTaRs CELSR3-DEXI CELSR3 chr3 48673991 DEXI chr16 11035553 Exonic hg19 NA BM126628 Out-of-frame Inter-chr p21.31 p13.13 108520 ChimerSeq ChiTaRs ChiTaRs STXBP3-MBD2 STXBP3 chr1 109295757 MBD2 chr18 51681343 Exonic hg19 NA BG024163 Out-of-frame Inter-chr p13.3 q21.2 Transcription factor 108521 ChimerSeq ChiTaRs ChiTaRs SUMF1-PRPF38B SUMF1 chr3 4402974 PRPF38B chr1 109241803 Exonic hg19 NA AW236721 Out-of-frame Inter-chr p26.1 p13.3 108522 ChimerSeq ChiTaRs ChiTaRs SH3BGRL3-DYNC1H1 SH3BGRL3 chr1 26608013 DYNC1H1 chr14 102449360 Exonic hg19 NA CN480036 3'UTR-CDS Inter-chr p36.11 q32.31 108523 ChimerSeq ChiTaRs ChiTaRs PSPH-PSPH PSPH chr7 56126149 PSPH chr7 56123443 Exonic hg19 NA CB241697 Out-of-frame Intra-chr p11.2 p11.2 108524 ChimerSeq ChiTaRs ChiTaRs FAM172A-XRN2 FAM172A chr5 93019294 XRN2 chr20 21309207 Exonic hg19 NA BP273629 Out-of-frame Inter-chr q15 Tumor suppressor gene p11.22 108525 ChimerSeq ChiTaRs ChiTaRs CLNK-CCT4 CLNK chr4 10602096 CCT4 chr2 62095716 Exonic hg19 NA BE698729 Out-of-frame Inter-chr p16.1 p15 108526 ChimerSeq ChiTaRs ChiTaRs RAPGEF1-PPP1CB RAPGEF1 chr9 134453437 PPP1CB chr2 28974976 Exonic hg19 NA T06907 Out-of-frame Inter-chr q34.13 p23.2 108527 ChimerSeq ChiTaRs ChiTaRs TSC22D3-RHOBTB2 TSC22D3 chrX 106957140 RHOBTB2 chr8 22875292 Exonic hg19 NA AW801061 Out-of-frame Inter-chr q22.3 p21.3 Tumor suppressor gene 108528 ChimerSeq ChiTaRs ChiTaRs GABRE-GABRE GABRE chrX 151122670 GABRE chrX 151122717 Exonic hg19 NA BF095087 Out-of-frame Intra-chr q28 q28 108529 ChimerSeq ChiTaRs ChiTaRs COMMD2-POFUT1 COMMD2 chr3 149459350 POFUT1 chr20 30824255 Exonic hg19 NA BE621420 Out-of-frame Inter-chr q25.1 q11.21 108530 ChimerSeq ChiTaRs ChiTaRs SNRNP200-RBM26 SNRNP200 chr2 96942983 RBM26 chr13 79896484 Exonic hg19 NA BE812865 Out-of-frame Inter-chr q11.2 q31.1 108531 ChimerSeq ChiTaRs ChiTaRs THOC3-EPHA4 THOC3 chr5 175392095 EPHA4 chr2 222283372 Exonic hg19 NA AW386073 Out-of-frame Inter-chr q35.2 q36.1 108532 ChimerSeq ChiTaRs ChiTaRs IDI2-AS1-STK40 IDI2-AS1 chr10 1086345 STK40 chr1 36807142 Exonic hg19 NA CB529143 Out-of-frame Inter-chr p15.3 p34.3 Tumor suppressor gene 108533 ChimerSeq ChiTaRs ChiTaRs EPAS1-PLP1 EPAS1 chr2 46524725 PLP1 chrX 103031798 Exonic hg19 NA DA387913 Out-of-frame Inter-chr p21 Tumor suppressor gene Transcription factor q22.2 108534 ChimerSeq ChiTaRs ChiTaRs ZNF767-FAAH2 ZNF767 chr7 149318212 FAAH2 chrX 57405081 Exonic hg19 NA CR980460 Out-of-frame Inter-chr p11.21 108535 ChimerSeq ChiTaRs ChiTaRs HOTAIRM1-AP2A2 HOTAIRM1 chr7 27135943 AP2A2 chr11 926035 Exonic hg19 NA DA758044 Out-of-frame Inter-chr p15.2 p15.5 108536 ChimerSeq ChiTaRs ChiTaRs SNHG1-SEC61A1 SNHG1 chr11 62622551 SEC61A1 chr3 127785924 Exonic hg19 NA DA769011 Out-of-frame Inter-chr q12.3 q21.3 108537 ChimerSeq ChiTaRs ChiTaRs FZD3-CTBP1 FZD3 chr8 28351860 CTBP1 chr4 1222109 Exonic hg19 NA DB495584 5'UTR-CDS Inter-chr p21.1 p16.3 108538 ChimerSeq ChiTaRs ChiTaRs ZBTB20-LUC7L2 ZBTB20 chr3 114079455 LUC7L2 chr7 139026155 Exonic hg19 NA BP397490 Out-of-frame Inter-chr q13.31 Transcription factor q34 108539 ChimerSeq ChiTaRs ChiTaRs DPYSL2-SDF2L1 DPYSL2 chr8 26505223 SDF2L1 chr22 21996618 Exonic hg19 NA BT006944 Out-of-frame Inter-chr p21.2 q11.21 108540 ChimerSeq ChiTaRs ChiTaRs SCIN-LOC100505876 SCIN chr7 12692729 LOC100505876 chr2 37428786 Exonic hg19 NA AI344443 Out-of-frame Inter-chr p21.3 108541 ChimerSeq ChiTaRs ChiTaRs MAFIP-SNX5 MAFIP chr4 115049 SNX5 chr20 17930935 Exonic hg19 NA BQ229313 Out-of-frame Inter-chr p11.23 108542 ChimerSeq ChiTaRs ChiTaRs BCAP31-PRPF6 BCAP31 chrX 152968511 PRPF6 chr20 62659849 Exonic hg19 NA BF766561 Out-of-frame Inter-chr q28 q13.33 108543 ChimerSeq ChiTaRs ChiTaRs CAMLG-C5orf42 CAMLG chr5 134074482 C5orf42 chr5 37120337 Exonic hg19 NA DA056654 Out-of-frame Intra-chr q31.1 p13.2 108544 ChimerSeq ChiTaRs ChiTaRs OXSR1-SASH1 OXSR1 chr3 38295914 SASH1 chr6 148865017 Exonic hg19 NA BP368746 Out-of-frame Inter-chr p22.2 q24.3 Tumor suppressor gene 108545 ChimerSeq ChiTaRs ChiTaRs RBM3-IGF1 RBM3 chrX 48436966 IGF1 chr12 102790960 Exonic hg19 NA AI740954 Out-of-frame Inter-chr p11.23 q23.2 Tumor suppressor gene 108546 ChimerSeq ChiTaRs ChiTaRs CDK5RAP2-SAP130 CDK5RAP2 chr9 123151203 SAP130 chr2 128712759 Exonic hg19 NA AA972005 Out-of-frame Inter-chr q33.2 q14.3 108547 ChimerSeq ChiTaRs ChiTaRs CLCN3-SMNDC1 CLCN3 chr4 170634332 SMNDC1 chr10 112057365 Exonic hg19 NA H05577 Out-of-frame Inter-chr q33 q25.2 108548 ChimerSeq ChiTaRs ChiTaRs SERINC1-MGEA5 SERINC1 chr6 122792956 MGEA5 chr10 103545120 Exonic hg19 NA DA527785 Out-of-frame Inter-chr q22.31 q24.32 108549 ChimerSeq ChiTaRs ChiTaRs COPS7B-COPS7B COPS7B chr2 232672795 COPS7B chr2 232672782 Exonic hg19 NA BF975110 Out-of-frame Intra-chr q37.1 q37.1 108550 ChimerSeq ChiTaRs ChiTaRs RTN4-ANAPC4 RTN4 chr2 55237342 ANAPC4 chr4 25419961 Exonic hg19 NA W68781 Out-of-frame Inter-chr p16.1 Tumor suppressor gene p15.2 108551 ChimerSeq ChiTaRs ChiTaRs FADS2-EZR FADS2 chr11 61634820 EZR chr6 159190821 Exonic hg19 NA BQ184412 Out-of-frame Inter-chr q12.2 q25.3 108552 ChimerSeq ChiTaRs ChiTaRs TMEM9B-NPIPB7 TMEM9B chr11 8969628 NPIPB7 chr16 28975467 Exonic hg19 NA AA115561 Out-of-frame Inter-chr p15.4 p12.1 108553 ChimerSeq ChiTaRs ChiTaRs GRIA3-PHF20 GRIA3 chrX 122622610 PHF20 chr20 34537177 Exonic hg19 NA X82068 Out-of-frame Inter-chr q25 q11.22 Transcription factor 108554 ChimerSeq ChiTaRs ChiTaRs TRDMT1-PANK1 TRDMT1 chr10 17186032 PANK1 chr10 91344093 Exonic hg19 NA BF825680 Out-of-frame Intra-chr p13 q23.31 108555 ChimerSeq ChiTaRs ChiTaRs LOC100131564-ABCA8 LOC100131564 chr1 93804984 ABCA8 chr17 66872607 Exonic hg19 NA BQ348114 Out-of-frame Inter-chr q24.2 108556 ChimerSeq ChiTaRs ChiTaRs PMF1-BGLAP-DDX42 PMF1-BGLAP chr1 156213108 DDX42 chr17 61889450 Exonic hg19 NA BM992075 Out-of-frame Inter-chr q22 q23.3 108557 ChimerSeq ChiTaRs ChiTaRs EXD3-ZNF276 EXD3 chr9 140317630 ZNF276 chr16 89788935 Exonic hg19 NA AF354755 Out-of-frame Inter-chr q34.3 q24.3 Transcription factor 108558 ChimerSeq ChiTaRs ChiTaRs BIRC6-GYG1 BIRC6 chr2 32676922 GYG1 chr3 148714087 Exonic hg19 NA DB445243 Out-of-frame Inter-chr p22.3 q24 108559 ChimerSeq ChiTaRs ChiTaRs BRD2-SLC39A11 BRD2 chr6 4426748 SLC39A11 chr17 70943897 Exonic hg19 NA AI990714 Out-of-frame Inter-chr Atypical:BRD q25.1 108560 ChimerSeq ChiTaRs ChiTaRs MAT2A-CNOT7 MAT2A chr2 85766396 CNOT7 chr8 17100571 Exonic hg19 NA BM749134 Out-of-frame Inter-chr p11.2 Tumor suppressor gene p22 108561 ChimerSeq ChiTaRs ChiTaRs PTMA-PTMA PTMA chr2 232577540 PTMA chr2 232573435 Exonic hg19 NA AA356995 Out-of-frame Intra-chr q37.1 q37.1 108562 ChimerSeq ChiTaRs ChiTaRs RASA4-SNAP25 RASA4 chr7 102257204 SNAP25 chr20 10287139 Exonic hg19 NA DA524284 Out-of-frame Inter-chr q22.1 p12.2 108563 ChimerSeq ChiTaRs ChiTaRs PSMC3-POLR2D PSMC3 chr11 47442202 POLR2D chr2 128605647 Exonic hg19 NA BU183660 Out-of-frame Inter-chr p11.2 q14.3 108564 ChimerSeq ChiTaRs ChiTaRs PDAP1-CTDSP2 PDAP1 chr7 99006213 CTDSP2 chr12 58214778 Exonic hg19 NA BG828185 Out-of-frame Inter-chr q22.1 q14.1 108565 ChimerSeq ChiTaRs ChiTaRs CALU-CSTB CALU chr7 128394363 CSTB chr21 45193912 Exonic hg19 NA BU940644 Out-of-frame Inter-chr q32.1 q22.3 108566 ChimerSeq ChiTaRs ChiTaRs CALD1-TM9SF4 CALD1 chr7 134653150 TM9SF4 chr20 30754836 Exonic hg19 NA AW993667 Out-of-frame Inter-chr q33 q11.21 108567 ChimerSeq ChiTaRs ChiTaRs TMEM57-CUL1 TMEM57 chr1 25757438 CUL1 chr7 148396047 Exonic hg19 NA DA799057 Out-of-frame Inter-chr p36.11 q36.1 Tumor suppressor gene 108568 ChimerSeq ChiTaRs ChiTaRs SERPING1-EIF4EBP2 SERPING1 chr11 57382278 EIF4EBP2 chr10 72164079 Exonic hg19 NA W03794 Out-of-frame Inter-chr q12.1 q22.1 108569 ChimerSeq ChiTaRs ChiTaRs CDK11B-DBI CDK11B chr1 1593828 DBI chr2 120124578 Exonic hg19 NA BM741735 Out-of-frame Inter-chr p36.33 q14.2 108570 ChimerSeq ChiTaRs ChiTaRs STK38-RBM6 STK38 chr6 36515220 RBM6 chr3 50137414 Exonic hg19 NA DA437266 Out-of-frame Inter-chr p21.31 p21.31 Tumor suppressor gene 108571 ChimerSeq ChiTaRs ChiTaRs TMEM41B-SSU72 TMEM41B chr11 9336138 SSU72 chr1 1480330 Exonic hg19 NA AL711176 Out-of-frame Inter-chr p15.4 p36.33 108572 ChimerSeq ChiTaRs ChiTaRs NBPF1-TAPT1 NBPF1 chr1 16932106 TAPT1 chr4 16163039 Exonic hg19 NA BF885212 Out-of-frame Inter-chr p36.13 p15.32 108573 ChimerSeq ChiTaRs ChiTaRs CD46-ZNF93 CD46 chr1 207930512 ZNF93 chr19 20044292 Exonic hg19 NA DA732859 Out-of-frame Inter-chr q32.2 p12 Transcription factor 108574 ChimerSeq ChiTaRs ChiTaRs NAA10-CD44 NAA10 chrX 153200438 CD44 chr11 35251215 Exonic hg19 NA BP270776 Out-of-frame Inter-chr q28 p13 Oncogene Tumor suppressor gene 108575 ChimerSeq ChiTaRs ChiTaRs STK3-OXR1 STK3 chr8 99837899 OXR1 chr8 107691436 Exonic hg19 NA DA392482 5'UTR-5'UTR Intra-chr q22.2 q23.1 108576 ChimerSeq ChiTaRs ChiTaRs PNPLA1-MTOR PNPLA1 chr6 36275482 MTOR chr1 11209072 Exonic hg19 NA BG194684 Out-of-frame Inter-chr p21.31 p36.22 Oncogene 108577 ChimerSeq ChiTaRs ChiTaRs PCDH10-SLC11A2 PCDH10 chr4 134071251 SLC11A2 chr12 51399108 Exonic hg19 NA DA241148 Out-of-frame Inter-chr q28.3 Tumor suppressor gene q13.12 108578 ChimerSeq ChiTaRs ChiTaRs RPL30-PRKCZ RPL30 chr8 99057626 PRKCZ chr1 2065738 Exonic hg19 NA BU526643 Out-of-frame Inter-chr q22.2 p36.33 108579 ChimerSeq ChiTaRs ChiTaRs TLR6-PPP4R1 TLR6 chr4 38858438 PPP4R1 chr18 9563376 Exonic hg19 NA DA670438 5'UTR-CDS Inter-chr p14 p11.22 108580 ChimerSeq ChiTaRs ChiTaRs WDR33-GNAS WDR33 chr2 128568721 GNAS chr20 57470666 Exonic hg19 NA BM802817 5'UTR-5'UTR Inter-chr q14.3 q13.32 Oncogene 108581 ChimerSeq ChiTaRs ChiTaRs CELF2-CCNH CELF2 chr10 11207645 CCNH chr5 86695212 Exonic hg19 NA BP873063 In-Frame Inter-chr p14 q14.3 108582 ChimerSeq ChiTaRs ChiTaRs HUWE1-ATP5A1 HUWE1 chrX 53600869 ATP5A1 chr18 43664115 Exonic hg19 NA BC014208 Out-of-frame Inter-chr p11.22 q21.1 108583 ChimerSeq ChiTaRs ChiTaRs NDRG1-NEAT1 NDRG1 chr8 134251224 NEAT1 chr11 65190556 Exonic hg19 NA AW296255 Out-of-frame Inter-chr q24.22 Tumor suppressor gene q13.1 108584 ChimerSeq ChiTaRs ChiTaRs SPARC-FN1 SPARC chr5 151042386 FN1 chr2 216238092 Exonic hg19 NA BQ182246 Out-of-frame Inter-chr q33.1 Tumor suppressor gene q35 Oncogene 108585 ChimerSeq ChiTaRs ChiTaRs ITM2C-CAPZB ITM2C chr2 231729763 CAPZB chr1 19665609 Exonic hg19 NA CA337229 Out-of-frame Inter-chr q37.1 p36.13 108586 ChimerSeq ChiTaRs ChiTaRs SCARB2-SERPINE1 SCARB2 chr4 77097063 SERPINE1 chr7 100777064 Exonic hg19 NA BQ650179 Out-of-frame Inter-chr q21.1 q22.1 108587 ChimerSeq ChiTaRs ChiTaRs DDB1-SIGMAR1 DDB1 chr11 61067001 SIGMAR1 chr9 34635690 Exonic hg19 NA AI291611 Out-of-frame Inter-chr q12.2 p13.3 108588 ChimerSeq ChiTaRs ChiTaRs WDR6-DEFA1 WDR6 chr3 49051149 DEFA1 chr8 6855185 Exonic hg19 NA BI025358 Out-of-frame Inter-chr p21.31 p23.1 108589 ChimerSeq ChiTaRs ChiTaRs MATR3-HSPA4 MATR3 chr5 138629495 HSPA4 chr5 132400670 Exonic hg19 NA AK300770 Out-of-frame Intra-chr q31.2 q31.1 KB 108590 ChimerSeq ChiTaRs ChiTaRs RNF217-MRPS27 RNF217 chr6 125330430 MRPS27 chr5 71519630 Exonic hg19 NA AK310474 Out-of-frame Inter-chr q22.31 q13.2 108591 ChimerSeq ChiTaRs ChiTaRs CCDC36-NMNAT3 CCDC36 chr3 49237006 NMNAT3 chr3 139279664 Exonic hg19 NA BF576138 5'UTR-3'UTR Intra-chr p21.31 q23 108592 ChimerSeq ChiTaRs ChiTaRs SLC16A1-UGT2B10 SLC16A1 chr1 113456634 UGT2B10 chr4 69681713 Exonic hg19 NA BP239062 Out-of-frame Inter-chr 108593 ChimerSeq ChiTaRs ChiTaRs ENG-CLIP2 ENG chr9 130577556 CLIP2 chr7 73819136 Exonic hg19 NA BU625451 Out-of-frame Inter-chr q34.11 q11.23 108594 ChimerSeq ChiTaRs ChiTaRs RHOB-SYN3 RHOB chr2 20649206 SYN3 chr22 33255976 Exonic hg19 NA AI087078 Out-of-frame Inter-chr p24.1 Tumor suppressor gene q12.3 108595 ChimerSeq ChiTaRs ChiTaRs ANKRD44-TMEM131 ANKRD44 chr2 198175377 TMEM131 chr2 98430434 Exonic hg19 NA DB239307 Out-of-frame Intra-chr q33.1 q11.2 108596 ChimerSeq ChiTaRs ChiTaRs MRPS28-ARFGEF1 MRPS28 chr8 80942505 ARFGEF1 chr8 68213482 Exonic hg19 NA BP350832 Out-of-frame Intra-chr q21.13 q13.2 108597 ChimerSeq ChiTaRs ChiTaRs GAS5-RAB7L1 GAS5 chr1 173835844 RAB7L1 chr1 205744110 Exonic hg19 NA DA382494 Out-of-frame Intra-chr q25.1 Tumor suppressor gene 108598 ChimerSeq ChiTaRs ChiTaRs FLNA-ATP13A1 FLNA chrX 153577752 ATP13A1 chr19 19770492 Exonic hg19 NA DB281169 Out-of-frame Inter-chr q28 Tumor suppressor gene p13.11 108599 ChimerSeq ChiTaRs ChiTaRs GPR115-CALR GPR115 chr6 47689749 CALR chr19 13054658 Exonic hg19 NA AW615310 Out-of-frame Inter-chr p13.13 108600 ChimerSeq ChiTaRs ChiTaRs JPX-GHITM JPX chrX 73190654 GHITM chr10 85901291 Exonic hg19 NA DA230760 Out-of-frame Inter-chr q13.2 q23.1 108601 ChimerSeq ChiTaRs ChiTaRs SNCG-ZNF785 SNCG chr10 88718576 ZNF785 chr16 30592187 Exonic hg19 NA M79265 Out-of-frame Inter-chr q23.2 p11.2 Transcription factor 108602 ChimerSeq ChiTaRs ChiTaRs TNF-ZNF276 TNF chr6 2876914 ZNF276 chr16 89805072 Exonic hg19 NA AA207063 Out-of-frame Inter-chr q24.3 Transcription factor 108603 ChimerSeq ChiTaRs ChiTaRs CANX-CSDA CANX chr5 179147512 CSDA chr12 10851694 Exonic hg19 NA BG168464 Out-of-frame Inter-chr 108604 ChimerSeq ChiTaRs ChiTaRs FOXO3-SEPT1 FOXO3 chr6 109001647 2001_ 9_ 1_ chr16 30389800 Exonic hg19 NA AA465591 Out-of-frame Inter-chr q21 Oncogene Tumor suppressor gene Transcription factor 108605 ChimerSeq ChiTaRs ChiTaRs SNHG3-TMEM167A SNHG3 chr1 28834672 TMEM167A chr5 82352413 Exonic hg19 NA BF669799 5'UTR-3'UTR Inter-chr p35.3 q14.2 108606 ChimerSeq ChiTaRs ChiTaRs RAD1-CA13 RAD1 chr5 34906140 CA13 chr8 86195011 Exonic hg19 NA BQ772417 Out-of-frame Inter-chr p13.2 q21.2 108607 ChimerSeq ChiTaRs ChiTaRs NBPF9-ST7 NBPF9 chr1 144340597 ST7 chr7 116841591 Exonic hg19 NA BU602007 Out-of-frame Inter-chr q21.2 q31.2 Tumor suppressor gene 108608 ChimerSeq ChiTaRs ChiTaRs ATP2B4-SIRT3 ATP2B4 chr1 203596347 SIRT3 chr11 233398 Exonic hg19 NA DB136999 5'UTR-5'UTR Inter-chr q32.1 p15.5 Tumor suppressor gene 108609 ChimerSeq ChiTaRs ChiTaRs CROCC-PSG3 CROCC chr1 17067176 PSG3 chr19 43370618 Exonic hg19 NA AK075079 Out-of-frame Inter-chr p36.13 q13.2 108610 ChimerSeq ChiTaRs ChiTaRs TMEM2-NRD1 TMEM2 chr9 74299771 NRD1 chr1 52255301 Exonic hg19 NA CB161008 Out-of-frame Inter-chr q21.13 108611 ChimerSeq ChiTaRs ChiTaRs RAB3GAP1-CHMP1A RAB3GAP1 chr2 135815658 CHMP1A chr16 89712137 Exonic hg19 NA CF593854 Out-of-frame Inter-chr q21.3 q24.3 108612 ChimerSeq ChiTaRs ChiTaRs ADCY2-ZFP36L2 ADCY2 chr1 152005157 ZFP36L2 chr2 43450007 Exonic hg19 NA BM995008 Out-of-frame Inter-chr p15.31 p21 Tumor suppressor gene 108613 ChimerSeq ChiTaRs ChiTaRs C7orf50-ZYX C7orf50 chr7 1036865 ZYX chr7 143079701 Exonic hg19 NA AI651868 Out-of-frame Intra-chr p22.3 q34 Tumor suppressor gene 108614 ChimerSeq ChiTaRs ChiTaRs CTR9-ATG4C CTR9 chr11 10795709 ATG4C chr1 63307120 Exonic hg19 NA BC020951 Out-of-frame Inter-chr p15.4 p31.3 108615 ChimerSeq ChiTaRs ChiTaRs CD99L2-STK10 CD99L2 chrX 149936514 STK10 chr5 171471686 Exonic hg19 NA BQ051882 Out-of-frame Inter-chr q28 q35.1 Tumor suppressor gene 108616 ChimerSeq ChiTaRs ChiTaRs GDI2-NDUFB7 GDI2 chr10 5855373 NDUFB7 chr19 14676890 Exonic hg19 NA BQ438913 Out-of-frame Inter-chr p15.1 p13.12 108617 ChimerSeq ChiTaRs ChiTaRs CREB3L2-CDKN1A CREB3L2 chr7 137586133 CDKN1A chr6 36652129 Exonic hg19 NA BC037414 Out-of-frame Inter-chr q33 Transcription factor p21.2 Tumor suppressor gene 108618 ChimerSeq ChiTaRs ChiTaRs HSPB1-UBE2M HSPB1 chr7 75932194 UBE2M chr19 59067367 Exonic hg19 NA CD387519 Out-of-frame Inter-chr q11.23 q13.43 108619 ChimerSeq ChiTaRs ChiTaRs PSEN2-NUP160 PSEN2 chr1 227081345 NUP160 chr11 47856706 Exonic hg19 NA AI652488 Out-of-frame Inter-chr q42.13 p11.2 108620 ChimerSeq ChiTaRs ChiTaRs APBB3-RASSF4 APBB3 chr5 139938125 RASSF4 chr10 45484720 Exonic hg19 NA AW206671 Out-of-frame Inter-chr q31.3 q11.21 Tumor suppressor gene 108621 ChimerSeq ChiTaRs ChiTaRs MAML1-ACAA2 MAML1 chr5 179202513 ACAA2 chr18 47310069 Exonic hg19 NA BQ328229 Out-of-frame Inter-chr q21.1 108622 ChimerSeq ChiTaRs ChiTaRs TMEM108-KLHL1 TMEM108 chr3 132948196 KLHL1 chr13 70535439 Exonic hg19 NA DA502462 Out-of-frame Inter-chr q22.1 q21.33 108623 ChimerSeq ChiTaRs ChiTaRs BHLHE40-RPL13A BHLHE40 chr3 5025014 RPL13A chr19 49993758 Exonic hg19 NA BG255829 Out-of-frame Inter-chr p26.1 Transcription factor q13.33 108624 ChimerSeq ChiTaRs ChiTaRs LHFPL2-CRK LHFPL2 chr5 77944427 CRK chr17 1340076 Exonic hg19 NA BJ991043 Out-of-frame Inter-chr q14.1 p13.3 108625 ChimerSeq ChiTaRs ChiTaRs ABCD3-EXOC4 ABCD3 chr1 94884144 EXOC4 chr7 133502077 Exonic hg19 NA DA454805 In-Frame Inter-chr p21.3 q33 108626 ChimerSeq ChiTaRs ChiTaRs MARK1-PFKP MARK1 chr1 220837712 PFKP chr10 3170511 Exonic hg19 NA AA350049 Out-of-frame Inter-chr q41 CAMK:CAMKL Oncogene p15.2 108627 ChimerSeq ChiTaRs ChiTaRs ESR1-LOC100287944 ESR1 chr6 152201906 LOC100287944 chr12 107033109 Exonic hg19 NA M69296 CDS-3'UTR Inter-chr q25.1 Oncogene Tumor suppressor gene Transcription factor 108628 ChimerSeq ChiTaRs ChiTaRs SNRPG-NOMO2 SNRPG chr2 70520845 NOMO2 chr16 18530823 Exonic hg19 NA BU186812 Out-of-frame Inter-chr p13.3 p12.3 108629 ChimerSeq ChiTaRs ChiTaRs YAE1D1-YAE1D1 YAE1D1 chr7 39612021 YAE1D1 chr7 39612030 Exonic hg19 NA AW819826 Out-of-frame Intra-chr p14.1 p14.1 108630 ChimerSeq ChiTaRs ChiTaRs PPAP2B-CALM3 PPAP2B chr1 57005126 CALM3 chr19 47112191 Exonic hg19 NA BE930858 Out-of-frame Inter-chr q13.32 108631 ChimerSeq ChiTaRs ChiTaRs HIST1H2AM-GPM6B HIST1H2AM chr6 27860963 GPM6B chrX 13801488 Exonic hg19 NA DA501345 5'UTR-CDS Inter-chr p22.1 p22.2 108632 ChimerSeq ChiTaRs ChiTaRs BAI2-SLC3A2 BAI2 chr1 32222416 SLC3A2 chr11 62623643 Exonic hg19 NA BC053513 CDS-5'UTR Inter-chr q12.3 108633 ChimerSeq ChiTaRs ChiTaRs PRPS1-PRKCB PRPS1 chrX 106871798 PRKCB chr16 23847607 Exonic hg19 NA DA717960 Out-of-frame Inter-chr q22.3 p12.2 Tumor suppressor gene 108634 ChimerSeq ChiTaRs ChiTaRs SRI-DKK1 SRI chr7 87849340 DKK1 chr10 54076557 Exonic hg19 NA BQ225130 Out-of-frame Inter-chr q21.12 q21.1 Tumor suppressor gene 108635 ChimerSeq ChiTaRs ChiTaRs C5orf24-TBC1D20 C5orf24 chr5 134191851 TBC1D20 chr20 417336 Exonic hg19 NA AA287758 Out-of-frame Inter-chr q31.1 p13 108636 ChimerSeq ChiTaRs ChiTaRs SEMA6A-ELOF1 SEMA6A chr5 115781956 ELOF1 chr19 11664451 Exonic hg19 NA AI652447 Out-of-frame Inter-chr q23.1 p13.2 108637 ChimerSeq ChiTaRs ChiTaRs LRFN2-UTP15 LRFN2 chr6 40555067 UTP15 chr5 72863084 Exonic hg19 NA BC150197 Out-of-frame Inter-chr p21.1 q13.2 108638 ChimerSeq ChiTaRs ChiTaRs LOC100507584-COPE LOC100507584 chr6 33859979 COPE chr19 19014139 Exonic hg19 NA AA625735 Out-of-frame Inter-chr p13.11 108639 ChimerSeq ChiTaRs ChiTaRs PLEKHA7-DHX32 PLEKHA7 chr11 16996586 DHX32 chr10 127584610 Exonic hg19 NA BE621116 Out-of-frame Inter-chr p15.1 q26.2 108640 ChimerSeq ChiTaRs ChiTaRs ARHGEF11-SEMA7A ARHGEF11 chr1 156905055 SEMA7A chr15 74707257 Exonic hg19 NA AI598158 Out-of-frame Inter-chr q23.1 q24.1 108641 ChimerSeq ChiTaRs ChiTaRs PTPRN2-PRKAR1B PTPRN2 chr7 158282478 PRKAR1B chr7 647041 Exonic hg19 NA AW498673 Out-of-frame Intra-chr q36.3 p22.3 108642 ChimerSeq ChiTaRs ChiTaRs PDCD4-GAPDH PDCD4 chr10 112641287 GAPDH chr12 6646488 Exonic hg19 NA BG926120 Out-of-frame Inter-chr q25.2 Tumor suppressor gene p13.31 108643 ChimerSeq ChiTaRs ChiTaRs FBXO44-MTSS1L FBXO44 chr1 11716072 MTSS1L chr16 70698237 Exonic hg19 NA BF822200 Out-of-frame Inter-chr p36.22 q22.1 108644 ChimerSeq ChiTaRs ChiTaRs HNRNPK-SPARC HNRNPK chr9 86593348 SPARC chr5 151042752 Exonic hg19 NA AW239547 Out-of-frame Inter-chr q21.32 q33.1 Tumor suppressor gene 108645 ChimerSeq ChiTaRs ChiTaRs PHF3-NOMO2 PHF3 chr6 64422978 NOMO2 chr16 18511697 Exonic hg19 NA BG008491 Out-of-frame Inter-chr q12 p12.3 108646 ChimerSeq ChiTaRs ChiTaRs CCNE2-HSPH1 CCNE2 chr8 95907429 HSPH1 chr13 31712939 Exonic hg19 NA BU561614 Out-of-frame Inter-chr q22.1 q12.3 108647 ChimerSeq ChiTaRs ChiTaRs ZNF195-RPL36A ZNF195 chr11 3381519 RPL36A chrX 100645962 Exonic hg19 NA BE540117 Out-of-frame Inter-chr p15.4 Transcription factor q22.1 108648 ChimerSeq ChiTaRs ChiTaRs RBAK-LOC389458-ARMC7 RBAK-LOC389458 chr7 5106797 ARMC7 chr17 73126323 Exonic hg19 NA AF226869 Out-of-frame Inter-chr Transcription factor q25.1 108649 ChimerSeq ChiTaRs ChiTaRs EFHD1-OLFM3 EFHD1 chr2 233547169 OLFM3 chr1 102268813 Exonic hg19 NA BF944253 Out-of-frame Inter-chr q37.1 p21.1 108650 ChimerSeq ChiTaRs ChiTaRs CTNNB1-BOLA2 CTNNB1 chr3 41281339 BOLA2 chr16 29454551 Exonic hg19 NA AK098472 Out-of-frame Inter-chr p22.1 Oncogene p11.2 108651 ChimerSeq ChiTaRs ChiTaRs PSMC3-DAP PSMC3 chr11 47447790 DAP chr5 10680762 Exonic hg19 NA BM843762 Out-of-frame Inter-chr p11.2 p15.2 108652 ChimerSeq ChiTaRs ChiTaRs SF3A3-TOX4 SF3A3 chr1 38423240 TOX4 chr14 21966045 Exonic hg19 NA AA490354 Out-of-frame Inter-chr p34.3 q11.2 108653 ChimerSeq ChiTaRs ChiTaRs SP100-SUCLG1 SP100 chr2 231307732 SUCLG1 chr2 84650652 Exonic hg19 NA BP319935 Out-of-frame Intra-chr q37.1 Tumor suppressor gene Transcription factor p11.2 108654 ChimerSeq ChiTaRs ChiTaRs NUP210-RPS4X NUP210 chr3 13395161 RPS4X chrX 71493766 Exonic hg19 NA BF814512 Out-of-frame Inter-chr p25.1 q13.1 108655 ChimerSeq ChiTaRs ChiTaRs HHIP-DDX46 HHIP chr4 145567438 DDX46 chr5 134094468 Exonic hg19 NA DA881233 Out-of-frame Inter-chr q31.21 q31.1 108656 ChimerSeq ChiTaRs ChiTaRs SYP-TSPAN7 SYP chrX 49056649 TSPAN7 chrX 38525384 Exonic hg19 NA BI599645 Out-of-frame Intra-chr p11.23 p11.4 108657 ChimerSeq ChiTaRs ChiTaRs LPPR5-FGF13 LPPR5 chr1 99470201 FGF13 chrX 137717755 Exonic hg19 NA DA494117 Out-of-frame Inter-chr q27.1 108658 ChimerSeq ChiTaRs ChiTaRs ENC1-LRBA ENC1 chr5 73936286 LRBA chr4 151185811 Exonic hg19 NA BC008644 Out-of-frame Inter-chr q13.3 q31.3 108659 ChimerSeq ChiTaRs ChiTaRs RAPGEF4-PGA3 RAPGEF4 chr2 173832125 PGA3 chr11 60971045 Exonic hg19 NA BP342773 Out-of-frame Inter-chr q31.1 q12.2 108660 ChimerSeq ChiTaRs ChiTaRs MYOT-HCFC2 MYOT chr5 137087660 HCFC2 chr12 104495890 Exonic hg19 NA AA625768 Out-of-frame Inter-chr q31.2 q23.3 108661 ChimerSeq ChiTaRs ChiTaRs AFF1-UBE2D3 AFF1 chr4 87869724 UBE2D3 chr4 103722612 Exonic hg19 NA AA100762 Out-of-frame Intra-chr q21.3 Oncogene q24 108662 ChimerSeq ChiTaRs ChiTaRs MTIF2-GLUL MTIF2 chr2 55463925 GLUL chr1 182353606 Exonic hg19 NA CB322028 Out-of-frame Inter-chr p16.1 q25.3 108663 ChimerSeq ChiTaRs ChiTaRs FAM46A-MED15 FAM46A chr6 82462396 MED15 chr22 20937008 Exonic hg19 NA DB259160 Out-of-frame Inter-chr q14.1 q11.21 108664 ChimerSeq ChiTaRs ChiTaRs TTYH3-SPTAN1 TTYH3 chr7 2702076 SPTAN1 chr9 131395939 Exonic hg19 NA BC019028 Out-of-frame Inter-chr p22.3 q34.11 108665 ChimerSeq ChiTaRs ChiTaRs RPL10A-DPP9 RPL10A chr6 35436754 DPP9 chr19 4714142 Exonic hg19 NA DA314410 Out-of-frame Inter-chr p21.31 p13.3 108666 ChimerSeq ChiTaRs ChiTaRs PHACTR4-HENMT1 PHACTR4 chr1 28733980 HENMT1 chr1 109197421 Exonic hg19 NA DB034670 Out-of-frame Intra-chr p35.3 Tumor suppressor gene p13.3 108667 ChimerSeq ChiTaRs ChiTaRs LOXL2-BCAP31 LOXL2 chr8 23225671 BCAP31 chrX 152966226 Exonic hg19 NA AW376389 Out-of-frame Inter-chr p21.3 q28 108668 ChimerSeq ChiTaRs ChiTaRs TMUB1-HOXC8 TMUB1 chr7 150780082 HOXC8 chr12 54405204 Exonic hg19 NA BG121046 Out-of-frame Inter-chr q36.1 q13.13 Transcription factor 108669 ChimerSeq ChiTaRs ChiTaRs ENY2-SF3B1 ENY2 chr8 110355900 SF3B1 chr2 198285152 Exonic hg19 NA AA699778 Out-of-frame Inter-chr q23.1 q33.1 Oncogene 108670 ChimerSeq ChiTaRs ChiTaRs IKBKG-DAZAP1 IKBKG chrX 153780405 DAZAP1 chr19 1429964 Exonic hg19 NA BI908202 Out-of-frame Inter-chr q28 p13.3 108671 ChimerSeq ChiTaRs ChiTaRs AUP1-PLAT AUP1 chr2 74756801 PLAT chr8 42033127 Exonic hg19 NA W32996 Out-of-frame Inter-chr p13.1 p11.21 108672 ChimerSeq ChiTaRs ChiTaRs LPPR4-REPIN1 LPPR4 chr1 99772631 REPIN1 chr7 150070620 Exonic hg19 NA AK056665 Out-of-frame Inter-chr q36.1 Transcription factor 108673 ChimerSeq ChiTaRs ChiTaRs TRIP12-ATP6V1H TRIP12 chr2 230744774 ATP6V1H chr8 54754148 Exonic hg19 NA DA283498 Out-of-frame Inter-chr q36.3 q11.23 108674 ChimerSeq ChiTaRs ChiTaRs RNF19A-STRAP RNF19A chr8 101272151 STRAP chr12 16052885 Exonic hg19 NA AW993767 Out-of-frame Inter-chr q22.2 p12.3 108675 ChimerSeq ChiTaRs ChiTaRs MYL3-MYBPC3 MYL3 chr3 46904934 MYBPC3 chr11 47355153 Exonic hg19 NA DA562443 Out-of-frame Inter-chr p21.31 p11.2 108676 ChimerSeq ChiTaRs ChiTaRs IQCG-ENO1 IQCG chr3 197682722 ENO1 chr1 8925376 Exonic hg19 NA BU192820 Out-of-frame Inter-chr q29 p36.23 108677 ChimerSeq ChiTaRs ChiTaRs PAG1-ARIH2 PAG1 chr8 82002925 ARIH2 chr3 49019115 Exonic hg19 NA BI024001 Out-of-frame Inter-chr q21.13 p21.31 108678 ChimerSeq ChiTaRs ChiTaRs PNRC1-EZR PNRC1 chr6 89790532 EZR chr6 159190376 Exonic hg19 NA BM846053 Out-of-frame Intra-chr q15 q25.3 108679 ChimerSeq ChiTaRs ChiTaRs PLA2G12A-SCAPER PLA2G12A chr4 110651122 SCAPER chr15 76866499 Exonic hg19 NA DA268556 Out-of-frame Inter-chr q25 q24.3 108680 ChimerSeq ChiTaRs ChiTaRs GAS5-SCGN GAS5 chr1 173835846 SCGN chr6 25652502 Exonic hg19 NA AU099439 Out-of-frame Inter-chr q25.1 Tumor suppressor gene p22.2 108681 ChimerSeq ChiTaRs ChiTaRs THRAP3-TBC1D2B THRAP3 chr1 36770634 TBC1D2B chr15 78287594 Exonic hg19 NA BX093103 Out-of-frame Inter-chr p34.3 q25.1 108682 ChimerSeq ChiTaRs ChiTaRs CAD-CKAP5 CAD chr2 27463935 CKAP5 chr11 46765092 Exonic hg19 NA CN265854 Out-of-frame Inter-chr p23.3 p11.2 108683 ChimerSeq ChiTaRs ChiTaRs TMEM110-MUSTN1-PRKCZ TMEM110-MUSTN1 chr3 52877502 PRKCZ chr1 2116075 Exonic hg19 NA AI803072 Out-of-frame Inter-chr p21.1 p36.33 108684 ChimerSeq ChiTaRs ChiTaRs CDC42-RNF14 CDC42 chr1 22419099 RNF14 chr5 141359696 Exonic hg19 NA AW960726 Out-of-frame Inter-chr p36.12 q31.3 108685 ChimerSeq ChiTaRs ChiTaRs CCZ1-COG7 CCZ1 chr7 5938551 COG7 chr16 23424791 Exonic hg19 NA R54035 Out-of-frame Inter-chr p22.1 p12.2 108686 ChimerSeq ChiTaRs ChiTaRs SNHG5-ADAMDEC1 SNHG5 chr6 86387086 ADAMDEC1 chr8 24259483 Exonic hg19 NA AV713678 Out-of-frame Inter-chr q14.3 p21.2 108687 ChimerSeq ChiTaRs ChiTaRs SEC22C-COPB1 SEC22C chr3 42623403 COPB1 chr11 14515885 Exonic hg19 NA DA761161 Out-of-frame Inter-chr p22.1 p15.2 108688 ChimerSeq ChiTaRs ChiTaRs SLC2A6-WDR90 SLC2A6 chr9 136344222 WDR90 chr16 705670 Exonic hg19 NA BP285361 Out-of-frame Inter-chr p13.3 108689 ChimerSeq ChiTaRs ChiTaRs MYOT-BOLA2 MYOT chr5 137090042 BOLA2 chr16 29873908 Exonic hg19 NA DB249980 Out-of-frame Inter-chr q31.2 p11.2 108690 ChimerSeq ChiTaRs ChiTaRs GLB1-CMTM7 GLB1 chr3 33055636 CMTM7 chr3 32483330 Exonic hg19 NA XX000016 Out-of-frame Intra-chr p22.3 p22.3 108691 ChimerSeq ChiTaRs ChiTaRs SECISBP2-RBM3 SECISBP2 chr9 91973037 RBM3 chrX 48434778 Exonic hg19 NA AK125614 Out-of-frame Inter-chr q22.2 p11.23 108692 ChimerSeq ChiTaRs ChiTaRs RPS27A-LIPH RPS27A chr2 55462629 LIPH chr3 185232431 Exonic hg19 NA BF375146 Out-of-frame Inter-chr p16.1 q27.2 108693 ChimerSeq ChiTaRs ChiTaRs FKBP15-EPB41 FKBP15 chr9 116025191 EPB41 chr1 29444873 Exonic hg19 NA BE736064 Out-of-frame Inter-chr q32 p35.3 Tumor suppressor gene 108694 ChimerSeq ChiTaRs ChiTaRs TCOF1-DSP TCOF1 chr5 149776157 DSP chr6 7581583 Exonic hg19 NA BE165642 Out-of-frame Inter-chr q32 p24.3 Tumor suppressor gene 108695 ChimerSeq ChiTaRs ChiTaRs TMEM177-FAM153B TMEM177 chr2 120445397 FAM153B chr5 175535964 Exonic hg19 NA AW137134 Out-of-frame Inter-chr q14.2 q35.2 108696 ChimerSeq ChiTaRs ChiTaRs MXI1-PEPD MXI1 chr10 111988023 PEPD chr19 33892639 Exonic hg19 NA CN415463 Out-of-frame Inter-chr q25.2 Tumor suppressor gene Transcription factor q13.11 108697 ChimerSeq ChiTaRs ChiTaRs FNBP1-FNBP1 FNBP1 chr9 132685592 FNBP1 chr9 132684016 Exonic hg19 NA AA258146 Out-of-frame Intra-chr q34.11 q34.11 108698 ChimerSeq ChiTaRs ChiTaRs HSPA9-RPS20 HSPA9 chr5 137902852 RPS20 chr8 56985723 Exonic hg19 NA BM818077 Out-of-frame Inter-chr q31.2 q12.1 108699 ChimerSeq ChiTaRs ChiTaRs GIMAP1-PTPRM GIMAP1 chr7 150417606 PTPRM chr18 8406399 Exonic hg19 NA BC029442 Out-of-frame Inter-chr q36.1 p11.23 108700 ChimerSeq ChiTaRs ChiTaRs SOX11-ZFP36L2 SOX11 chr2 5840532 ZFP36L2 chr2 43450202 Exonic hg19 NA AW993390 Out-of-frame Intra-chr p25.2 Oncogene Tumor suppressor gene Transcription factor p21 Tumor suppressor gene 108701 ChimerSeq ChiTaRs ChiTaRs PDLIM5-FAM126A PDLIM5 chr4 95445026 FAM126A chr7 23000853 Exonic hg19 NA DA675800 Out-of-frame Inter-chr q22.3 p15.3 108702 ChimerSeq ChiTaRs ChiTaRs LOC202781-SEC63 LOC202781 chr7 154795846 SEC63 chr6 108192433 Exonic hg19 NA BU173275 Out-of-frame Inter-chr q21 108703 ChimerSeq ChiTaRs ChiTaRs H6PD-TWIST1 H6PD chr1 9325969 TWIST1 chr7 19155680 Exonic hg19 NA BG994288 Out-of-frame Inter-chr p36.22 p21.1 Transcription factor 108704 ChimerSeq ChiTaRs ChiTaRs HLA-B-FKBP8 HLA-B chr6 2628787 FKBP8 chr19 18644083 Exonic hg19 NA BQ063441 Out-of-frame Inter-chr p13.11 108705 ChimerSeq ChiTaRs ChiTaRs ABCA1-HNRNPK ABCA1 chr9 107690404 HNRNPK chr9 86587842 Exonic hg19 NA CR983438 Out-of-frame Intra-chr q31.1 q21.32 108706 ChimerSeq ChiTaRs ChiTaRs HIST1H2AH-DKK3 HIST1H2AH chr6 27115245 DKK3 chr11 12023847 Exonic hg19 NA DA794890 Out-of-frame Inter-chr p22.1 p15.3 Tumor suppressor gene 108707 ChimerSeq ChiTaRs ChiTaRs RPL37A-DHX57 RPL37A chr2 217364051 DHX57 chr2 39025430 Exonic hg19 NA DR759675 Out-of-frame Intra-chr q35 p22.1 108708 ChimerSeq ChiTaRs ChiTaRs VPS26A-GYS1 VPS26A chr10 70892770 GYS1 chr19 49474254 Exonic hg19 NA DA766946 Out-of-frame Inter-chr q22.1 q13.33 108709 ChimerSeq ChiTaRs ChiTaRs SERINC1-SLC39A10 SERINC1 chr6 122792956 SLC39A10 chr2 196544755 Exonic hg19 NA DA221098 5'UTR-5'UTR Inter-chr q22.31 q32.3 108710 ChimerSeq ChiTaRs ChiTaRs ABCE1-LOC100505666 ABCE1 chr4 146041129 LOC100505666 chr1 155023772 Exonic hg19 NA BM754393 Out-of-frame Inter-chr q31.21 108711 ChimerSeq ChiTaRs ChiTaRs ELK1-PPOX ELK1 chrX 47509979 PPOX chr1 161144978 Exonic hg19 NA DC302335 Out-of-frame Inter-chr p11.23 Transcription factor q23.3 108712 ChimerSeq ChiTaRs ChiTaRs ERGIC1-ZZEF1 ERGIC1 chr5 172379240 ZZEF1 chr17 3999957 Exonic hg19 NA BF509585 Out-of-frame Inter-chr q35.1 p13.2 108713 ChimerSeq ChiTaRs ChiTaRs AKNA-ENO1 AKNA chr9 117122378 ENO1 chr1 8938650 Exonic hg19 NA AY703046 Out-of-frame Inter-chr q32 Transcription factor p36.23 108714 ChimerSeq ChiTaRs ChiTaRs IL13-AKAP4 IL13 chr5 131996477 AKAP4 chrX 49955420 Exonic hg19 NA AF072756 Out-of-frame Inter-chr q31.1 p11.22 108715 ChimerSeq ChiTaRs ChiTaRs SYP-CYFIP2 SYP chrX 49045656 CYFIP2 chr5 156816341 Exonic hg19 NA AW952111 Out-of-frame Inter-chr p11.23 q33.3 108716 ChimerSeq ChiTaRs ChiTaRs INPP5B-PDCL INPP5B chr1 38330032 PDCL chr9 125581560 Exonic hg19 NA AA256218 Out-of-frame Inter-chr p34.3 q33.2 108717 ChimerSeq ChiTaRs ChiTaRs YWHAZ-NDUFB9 YWHAZ chr8 101960996 NDUFB9 chr8 125562047 Exonic hg19 NA BG284443 Out-of-frame Intra-chr q22.3 q24.13 108718 ChimerSeq ChiTaRs ChiTaRs CHL1-ELAC1 CHL1 chr3 443372 ELAC1 chr18 48513103 Exonic hg19 NA DA092511 Out-of-frame Inter-chr p26.3 q21.2 108719 ChimerSeq ChiTaRs ChiTaRs ISY1-RAB43-BAZ1B ISY1-RAB43 chr3 128848249 BAZ1B chr7 72908708 Exonic hg19 NA BF589754 Out-of-frame Inter-chr q21.3 q11.23 108720 ChimerSeq ChiTaRs ChiTaRs KIAA1210-LIG3 KIAA1210 chrX 118215027 LIG3 chr17 33324802 Exonic hg19 NA BF091674 Out-of-frame Inter-chr q24 q12 Tumor suppressor gene 108721 ChimerSeq ChiTaRs ChiTaRs PALM2-GNAQ PALM2 chr9 112642962 GNAQ chr9 80430521 Exonic hg19 NA DB494590 Out-of-frame Intra-chr q31.3 q21.2 Oncogene 108722 ChimerSeq ChiTaRs ChiTaRs NDUFS4-RTN3 NDUFS4 chr5 52899340 RTN3 chr11 63448972 Exonic hg19 NA DA290461 Out-of-frame Inter-chr q11.2 q13.1 108723 ChimerSeq ChiTaRs ChiTaRs APOD-BAIAP2L1 APOD chr3 195298183 BAIAP2L1 chr7 97934755 Exonic hg19 NA BI042840 Out-of-frame Inter-chr q29 q22.1 108724 ChimerSeq ChiTaRs ChiTaRs AVL9-LRAT AVL9 chr7 32800442 LRAT chr4 155672877 Exonic hg19 NA BX093249 Out-of-frame Inter-chr p14.3 q32.1 108725 ChimerSeq ChiTaRs ChiTaRs CLN8-NMT1 CLN8 chr8 1729252 NMT1 chr17 43183177 Exonic hg19 NA CX755976 Out-of-frame Inter-chr p23.3 q21.31 108726 ChimerSeq ChiTaRs ChiTaRs KIAA1715-EPB41 KIAA1715 chr2 176792565 EPB41 chr1 29444837 Exonic hg19 NA AK172796 Out-of-frame Inter-chr p35.3 Tumor suppressor gene 108727 ChimerSeq ChiTaRs ChiTaRs ZNF746-C5orf62 ZNF746 chr7 149194643 C5orf62 chr5 150174991 Exonic hg19 NA BU655959 5'UTR-5'UTR Inter-chr q36.1 Transcription factor 108728 ChimerSeq ChiTaRs ChiTaRs ZBTB8B-CDH12 ZBTB8B chr1 33019141 CDH12 chr5 21783553 Exonic hg19 NA DA718170 Out-of-frame Inter-chr p35.1 Transcription factor p14.3 108729 ChimerSeq ChiTaRs ChiTaRs RAPGEF6-USP33 RAPGEF6 chr5 130970833 USP33 chr1 78205027 Exonic hg19 NA DC370352 Out-of-frame Inter-chr q31.1 p31.1 Tumor suppressor gene 108730 ChimerSeq ChiTaRs ChiTaRs AGT-GGCT AGT chr1 230849867 GGCT chr7 30544320 Exonic hg19 NA BP347159 Out-of-frame Inter-chr q42.2 p14.3 108731 ChimerSeq ChiTaRs ChiTaRs POU2F1-RNF13 POU2F1 chr1 167190197 RNF13 chr3 149613256 Exonic hg19 NA DA348770 Out-of-frame Inter-chr q24.2 Transcription factor q25.1 108732 ChimerSeq ChiTaRs ChiTaRs GATS-GTF2F1 GATS chr7 99821521 GTF2F1 chr19 6383483 Exonic hg19 NA DA128910 Out-of-frame Inter-chr q22.1 p13.3 108733 ChimerSeq ChiTaRs ChiTaRs ACOX3-DLGAP4 ACOX3 chr4 8442438 DLGAP4 chr20 35125107 Exonic hg19 NA BI915466 5'UTR-5'UTR Inter-chr p16.1 q11.23 108734 ChimerSeq ChiTaRs ChiTaRs LOC100130557-RHEB LOC100130557 chr1 41157540 RHEB chr7 151164215 Exonic hg19 NA AA313806 Out-of-frame Inter-chr q36.1 Oncogene 108735 ChimerSeq ChiTaRs ChiTaRs CPNE4-CSF1R CPNE4 chr3 131962431 CSF1R chr5 149474315 Exonic hg19 NA AA580838 Out-of-frame Inter-chr q22.1 q32 Oncogene 108736 ChimerSeq ChiTaRs ChiTaRs CD74-CD74 CD74 chr5 149781474 CD74 chr5 149781479 Exonic hg19 NA AA731479 Out-of-frame Intra-chr q33.1 q33.1 108737 ChimerSeq ChiTaRs ChiTaRs STOML2-C10orf2 STOML2 chr9 35102894 C10orf2 chr10 102747512 Exonic hg19 NA BP230714 Out-of-frame Inter-chr p13.3 108738 ChimerSeq ChiTaRs ChiTaRs ATP6AP2-ARHGEF12 ATP6AP2 chrX 40448332 ARHGEF12 chr11 120347400 Exonic hg19 NA AI823740 Out-of-frame Inter-chr p11.4 q23.3 Tumor suppressor gene 108739 ChimerSeq ChiTaRs ChiTaRs C4orf48-NCOA3 C4orf48 chr4 2045691 NCOA3 chr20 46275876 Exonic hg19 NA BQ009202 Out-of-frame Inter-chr p16.3 q13.12 Transcription factor 108740 ChimerSeq ChiTaRs ChiTaRs CD74-LOC100507412 CD74 chr5 149792314 LOC100507412 chr? 109394 Exonic hg19 NA BP270601 Out-of-frame Inter-chr q33.1 108741 ChimerSeq ChiTaRs ChiTaRs HIVEP3-APOC1 HIVEP3 chr1 42216188 APOC1 chr19 45419445 Exonic hg19 NA BP389649 Out-of-frame Inter-chr p34.2 Tumor suppressor gene Transcription factor q13.32 108742 ChimerSeq ChiTaRs ChiTaRs ATP1A1-CCDC72 ATP1A1 chr1 116943778 CCDC72 chr3 48482001 Exonic hg19 NA BG573661 Out-of-frame Inter-chr p13.1 108743 ChimerSeq ChiTaRs ChiTaRs ERCC6-METAP2 ERCC6 chr10 50732619 METAP2 chr12 95868071 Exonic hg19 NA BM759548 Out-of-frame Inter-chr q11.23 q22 108744 ChimerSeq ChiTaRs ChiTaRs ENO1-MAPRE1 ENO1 chr1 8938745 MAPRE1 chr20 31424542 Exonic hg19 NA BG611652 Out-of-frame Inter-chr p36.23 q11.21 108745 ChimerSeq ChiTaRs ChiTaRs CALD1-SREK1IP1 CALD1 chr7 134618086 SREK1IP1 chr5 64016719 Exonic hg19 NA AW841250 Out-of-frame Inter-chr q33 q12.3 108746 ChimerSeq ChiTaRs ChiTaRs ZDHHC15-PLBD2 ZDHHC15 chrX 74621108 PLBD2 chr12 113822699 Exonic hg19 NA CA446824 Out-of-frame Inter-chr q13.3 q24.13 108747 ChimerSeq ChiTaRs ChiTaRs SNX2-B4GALT5 SNX2 chr5 122131078 B4GALT5 chr20 48249492 Exonic hg19 NA CN280929 CDS-3'UTR Inter-chr q23.2 q13.13 108748 ChimerSeq ChiTaRs ChiTaRs GNAI2-NT5DC2 GNAI2 chr3 50273885 NT5DC2 chr3 52562484 Exonic hg19 NA BY797642 Out-of-frame Intra-chr p21.31 p21.1 108749 ChimerSeq ChiTaRs ChiTaRs YEATS2-TRIM68 YEATS2 chr3 183530410 TRIM68 chr11 4621216 Exonic hg19 NA AA436602 Out-of-frame Inter-chr q27.1 p15.4 108750 ChimerSeq ChiTaRs ChiTaRs ABCA4-MMACHC ABCA4 chr1 94480143 MMACHC chr1 45976723 Exonic hg19 NA BM713995 Out-of-frame Intra-chr p22.1 p34.1 108751 ChimerSeq ChiTaRs ChiTaRs LOC653739-KIAA0226L LOC653739 chr7 134833024 KIAA0226L chr13 46936680 Exonic hg19 NA DB123095 Out-of-frame Inter-chr 108752 ChimerSeq ChiTaRs ChiTaRs ARPC2-TIMP2 ARPC2 chr2 219103470 TIMP2 chr17 76849254 Exonic hg19 NA AW361137 Out-of-frame Inter-chr q35 q25.3 108753 ChimerSeq ChiTaRs ChiTaRs CLIP2-KRT8 CLIP2 chr7 73767601 KRT8 chr12 53290971 Exonic hg19 NA BU153499 Out-of-frame Inter-chr q11.23 q13.13 108754 ChimerSeq ChiTaRs ChiTaRs ATP5I-AXDND1 ATP5I chr4 668058 AXDND1 chr1 179459898 Exonic hg19 NA CA418371 Out-of-frame Inter-chr p16.3 q25.2 108755 ChimerSeq ChiTaRs ChiTaRs NAIP-NFIL3 NAIP chr5 70316553 NFIL3 chr9 94172652 Exonic hg19 NA DA676009 Out-of-frame Inter-chr q13.2 q22.31 Transcription factor 108756 ChimerSeq ChiTaRs ChiTaRs F11R-GOLGB1 F11R chr1 160990966 GOLGB1 chr3 121413073 Exonic hg19 NA BG546557 Out-of-frame Inter-chr q23.3 q13.33 108757 ChimerSeq ChiTaRs ChiTaRs SFTPA2-MMP14 SFTPA2 chr10 81316808 MMP14 chr14 23310820 Exonic hg19 NA BI012457 Out-of-frame Inter-chr q22.3 q11.2 108758 ChimerSeq ChiTaRs ChiTaRs CCDC132-GLS CCDC132 chr7 92883244 GLS chr2 191792032 Exonic hg19 NA DA218082 In-Frame Inter-chr q32.2 Tumor suppressor gene 108759 ChimerSeq ChiTaRs ChiTaRs DOLPP1-ZNF804B DOLPP1 chr9 131851607 ZNF804B chr7 88556176 Exonic hg19 NA BM671376 Out-of-frame Inter-chr q34.11 q21.13 Transcription factor 108760 ChimerSeq ChiTaRs ChiTaRs DDX3X-DDX3X DDX3X chrX 41203517 DDX3X chrX 41206602 Exonic hg19 NA BM991732 Out-of-frame Intra-chr p11.4 Tumor suppressor gene p11.4 Tumor suppressor gene 108761 ChimerSeq ChiTaRs ChiTaRs IL13RA1-SERPINE2 IL13RA1 chrX 117928496 SERPINE2 chr2 224849616 Exonic hg19 NA BQ774660 3'UTR-CDS Inter-chr q24 q36.1 108762 ChimerSeq ChiTaRs ChiTaRs NOTCH1-NUP214 NOTCH1 chr9 139438534 NUP214 chr9 134062675 Exonic hg19 NA XX000003 In-Frame Intra-chr q34.3 Oncogene Tumor suppressor gene q34.13 Oncogene 108763 ChimerSeq ChiTaRs ChiTaRs DAG1-NEAT1 DAG1 chr3 49573048 NEAT1 chr11 65193540 Exonic hg19 NA CA411584 Out-of-frame Inter-chr p21.31 q13.1 108764 ChimerSeq ChiTaRs ChiTaRs CDYL-APP CDYL chr6 4892138 APP chr21 27253833 Exonic hg19 NA BE091543 Out-of-frame Inter-chr p25.1 q21.3 108765 ChimerSeq ChiTaRs ChiTaRs ADCY2-SPACA3 ADCY2 chr5 7827645 SPACA3 chr17 31322640 Exonic hg19 NA AA398583 Out-of-frame Inter-chr p15.31 q11.2 108766 ChimerSeq ChiTaRs ChiTaRs COL6A3-PICALM COL6A3 chr2 238322808 PICALM chr11 85692928 Exonic hg19 NA DA556762 Out-of-frame Inter-chr q37.3 q14.2 108767 ChimerSeq ChiTaRs ChiTaRs MAD2L2-LOC100507412 MAD2L2 chr1 11741145 LOC100507412 chr? 110054 Exonic hg19 NA CN334908 Out-of-frame Inter-chr p36.22 108768 ChimerSeq ChiTaRs ChiTaRs SNAPC4-CYP27A1 SNAPC4 chr9 139273745 CYP27A1 chr2 219677329 Exonic hg19 NA CX753377 Out-of-frame Inter-chr q34.3 Transcription factor q35 108769 ChimerSeq ChiTaRs ChiTaRs GORASP2-ESYT2 GORASP2 chr2 171802544 ESYT2 chr7 158523800 Exonic hg19 NA CN371838 Out-of-frame Inter-chr q31.1 q36.3 108770 ChimerSeq ChiTaRs ChiTaRs HNRPDL-SKAP2 HNRPDL chr4 83350566 SKAP2 chr7 26883648 Exonic hg19 NA CA406851 Out-of-frame Inter-chr p15.2 108771 ChimerSeq ChiTaRs ChiTaRs MRPL22-FAM156B MRPL22 chr5 154320829 FAM156B chrX 52977599 Exonic hg19 NA DA368331 Out-of-frame Inter-chr q33.2 p11.22 108772 ChimerSeq ChiTaRs ChiTaRs PNRC2-LRRC16A PNRC2 chr1 31418 LRRC16A chr6 25388216 Exonic hg19 NA BQ187799 Out-of-frame Inter-chr p36.11 108773 ChimerSeq ChiTaRs ChiTaRs PCNP-PCCA PCNP chr3 101313279 PCCA chr13 100809560 Exonic hg19 NA AI951320 Out-of-frame Inter-chr q12.3 q32.3 108774 ChimerSeq ChiTaRs ChiTaRs NPHP3-ACAD11-GNS NPHP3-ACAD11 chr3 132400604 GNS chr12 65108727 Exonic hg19 NA CR741239 Out-of-frame Inter-chr q22.1 q14.3 108775 ChimerSeq ChiTaRs ChiTaRs NASP-NOP56 NASP chr1 46072216 NOP56 chr20 2637494 Exonic hg19 NA CN266780 Out-of-frame Inter-chr p34.1 p13 108776 ChimerSeq ChiTaRs ChiTaRs PTMA-PPIE PTMA chr2 232578241 PPIE chr1 40204568 Exonic hg19 NA BQ923234 Out-of-frame Inter-chr q37.1 p34.2 108777 ChimerSeq ChiTaRs ChiTaRs PLXND1-AACS PLXND1 chr3 129274314 AACS chr12 125549997 Exonic hg19 NA AI962214 Out-of-frame Inter-chr q22.1 q24.31 108778 ChimerSeq ChiTaRs ChiTaRs PABPC1-DPP4 PABPC1 chr8 101721960 DPP4 chr2 162849781 Exonic hg19 NA BQ348968 Out-of-frame Inter-chr q22.3 q24.2 Tumor suppressor gene 108779 ChimerSeq ChiTaRs ChiTaRs PPIG-CASP8AP2 PPIG chr2 170473363 CASP8AP2 chr6 90578548 Exonic hg19 NA AV723228 Out-of-frame Inter-chr q31.1 q15 108780 ChimerSeq ChiTaRs ChiTaRs SNTB1-EFR3A SNTB1 chr8 121632724 EFR3A chr8 132968112 Exonic hg19 NA AI133211 Out-of-frame Intra-chr q24.12 q24.22 108781 ChimerSeq ChiTaRs ChiTaRs PNLIPRP3-CIRBP PNLIPRP3 chr10 118202646 CIRBP chr19 1271412 Exonic hg19 NA BG698664 Out-of-frame Inter-chr q25.3 p13.3 108782 ChimerSeq ChiTaRs ChiTaRs SHFM1-HSP90AA1 SHFM1 chr7 96339143 HSP90AA1 chr14 102551748 Exonic hg19 NA DW408006 Out-of-frame Inter-chr q32.31 Oncogene 108783 ChimerSeq ChiTaRs ChiTaRs FOXN2-CXCR4 FOXN2 chr2 48541953 CXCR4 chr2 136873044 Exonic hg19 NA AV743265 5'UTR-CDS Intra-chr p16.3 Transcription factor q22.1 108784 ChimerSeq ChiTaRs ChiTaRs DUSP27-MALAT1 DUSP27 chr1 167097525 MALAT1 chr11 65267154 Exonic hg19 NA AJ707118 Out-of-frame Inter-chr q24.1 q13.1 108785 ChimerSeq ChiTaRs ChiTaRs HMGN3-TMEM5 HMGN3 chr6 79944333 TMEM5 chr12 64202453 Exonic hg19 NA BM503944 Out-of-frame Inter-chr q14.1 Transcription factor q14.2 108786 ChimerSeq ChiTaRs ChiTaRs RADIL-SPATA3 RADIL chr7 4897398 SPATA3 chr2 231865132 Exonic hg19 NA AI204211 Out-of-frame Inter-chr p22.1 q37.1 108787 ChimerSeq ChiTaRs ChiTaRs PPIH-MTSS1L PPIH chr1 43147011 MTSS1L chr16 70695122 Exonic hg19 NA AW511494 Out-of-frame Inter-chr p34.2 q22.1 108788 ChimerSeq ChiTaRs ChiTaRs ABCA2-ATP2B2 ABCA2 chr9 139908412 ATP2B2 chr3 10370464 Exonic hg19 NA BE830705 Out-of-frame Inter-chr q34.3 p25.3 108789 ChimerSeq ChiTaRs ChiTaRs SMG5-OFD1 SMG5 chr1 156246950 OFD1 chrX 13769366 Exonic hg19 NA AA313406 Out-of-frame Inter-chr q22 p22.2 108790 ChimerSeq ChiTaRs ChiTaRs QARS-AP2A1 QARS chr3 49141907 AP2A1 chr19 50304216 Exonic hg19 NA BU845330 Out-of-frame Inter-chr p21.31 q13.33 108791 ChimerSeq ChiTaRs ChiTaRs IL1RN-CDK11B IL1RN chr2 113891591 CDK11B chr1 1595753 Exonic hg19 NA CA748662 Out-of-frame Inter-chr q14.1 p36.33 108792 ChimerSeq ChiTaRs ChiTaRs CCT3-HVCN1 CCT3 chr1 156280436 HVCN1 chr12 111091636 Exonic hg19 NA AA748732 Out-of-frame Inter-chr q22 q24.11 108793 ChimerSeq ChiTaRs ChiTaRs FOSL2-INTS10 FOSL2 chr2 28636711 INTS10 chr8 19688033 Exonic hg19 NA BF951217 Out-of-frame Inter-chr p23.2 Transcription factor p21.3 108794 ChimerSeq ChiTaRs ChiTaRs PHLDB2-PNN PHLDB2 chr3 111603686 PNN chr14 39650764 Exonic hg19 NA BI029782 Out-of-frame Inter-chr q13.2 q21.1 Tumor suppressor gene 108795 ChimerSeq ChiTaRs ChiTaRs PTPRZ1-SND1 PTPRZ1 chr7 121513614 SND1 chr7 127714553 Exonic hg19 NA DA516298 Out-of-frame Intra-chr q31.32 q32.1 108796 ChimerSeq ChiTaRs ChiTaRs HTN3-OSBPL1A HTN3 chr4 70902122 OSBPL1A chr18 21761109 Exonic hg19 NA BP334921 Out-of-frame Inter-chr q11.2 108797 ChimerSeq ChiTaRs ChiTaRs ALDH1A1-EPB41L4A ALDH1A1 chr9 75515857 EPB41L4A chr5 111754705 Exonic hg19 NA BF436998 Out-of-frame Inter-chr q21.13 q22.2 108798 ChimerSeq ChiTaRs ChiTaRs BNIP3L-MKI67 BNIP3L chr8 26268501 MKI67 chr10 129906767 Exonic hg19 NA T96127 Out-of-frame Inter-chr p21.2 Tumor suppressor gene q26.2 108799 ChimerSeq ChiTaRs ChiTaRs MYO1B-RHBDD1 MYO1B chr2 192160954 RHBDD1 chr2 227729320 Exonic hg19 NA DA642718 Out-of-frame Intra-chr q32.3 q36.3 108800 ChimerSeq ChiTaRs ChiTaRs AKNAD1-FAP AKNAD1 chr1 109506079 FAP chr2 163053462 Exonic hg19 NA BC002939 Out-of-frame Inter-chr p13.3 q24.2 108801 ChimerSeq ChiTaRs ChiTaRs NAA50-CHIT1 NAA50 chr3 113465007 CHIT1 chr1 203194920 Exonic hg19 NA BP305867 Out-of-frame Inter-chr q13.31 q32.1 108802 ChimerSeq ChiTaRs ChiTaRs HAVCR1-HAVCR1 HAVCR1 chr5 156476160 HAVCR1 chr5 156485213 Exonic hg19 NA AW604191 Out-of-frame Intra-chr q33.3 q33.3 108803 ChimerSeq ChiTaRs ChiTaRs NAPEPLD-TAF2 NAPEPLD chr7 102740557 TAF2 chr8 120830891 Exonic hg19 NA BQ319708 Out-of-frame Inter-chr Tumor suppressor gene q24.12 108804 ChimerSeq ChiTaRs ChiTaRs ITIH5-PELP1 ITIH5 chr10 7621785 PELP1 chr17 4578143 Exonic hg19 NA AW948496 Out-of-frame Inter-chr p14 p13.2 108805 ChimerSeq ChiTaRs ChiTaRs SAA2-SAA4-CCDC124 SAA2-SAA4 chr11 18270182 CCDC124 chr19 18054699 Exonic hg19 NA BG568194 Out-of-frame Inter-chr p15.1 Tumor suppressor gene p13.11 108806 ChimerSeq ChiTaRs ChiTaRs FRYL-PRR4 FRYL chr4 48567001 PRR4 chr12 10998450 Exonic hg19 NA AK128543 Out-of-frame Inter-chr p11 108807 ChimerSeq ChiTaRs ChiTaRs CCNI-TXLNG2P CCNI chr4 77996846 TXLNG2P chrY 21749094 Exonic hg19 NA AI809466 Out-of-frame Inter-chr q21.1 108808 ChimerSeq ChiTaRs ChiTaRs ZMYND11-ZFAND4 ZMYND11 chr10 226068 ZFAND4 chr10 46122508 Exonic hg19 NA BI457833 Out-of-frame Intra-chr p15.3 Tumor suppressor gene q11.22 KB 108809 ChimerSeq ChiTaRs ChiTaRs AURKAIP1-MALAT1 AURKAIP1 chr1 1309586 MALAT1 chr11 65267794 Exonic hg19 NA CA426646 Out-of-frame Inter-chr p36.33 q13.1 108810 ChimerSeq ChiTaRs ChiTaRs C1orf112-HSP90AA1 C1orf112 chr1 169822631 HSP90AA1 chr14 102549604 Exonic hg19 NA AI077524 Out-of-frame Inter-chr q24.2 q32.31 Oncogene 108811 ChimerSeq ChiTaRs ChiTaRs AMD1-TNFAIP3 AMD1 chr6 111196421 TNFAIP3 chr6 138192348 Exonic hg19 NA CR992767 Out-of-frame Intra-chr q21 q23.3 Oncogene Tumor suppressor gene 108812 ChimerSeq ChiTaRs ChiTaRs EIF4E-UBXN7 EIF4E chr4 99850284 UBXN7 chr3 196118683 Exonic hg19 NA DA724990 5'UTR-CDS Inter-chr q23 q29 108813 ChimerSeq ChiTaRs ChiTaRs ARID5B-CDAN1 ARID5B chr10 63850937 CDAN1 chr15 43016702 Exonic hg19 NA AA341453 Out-of-frame Inter-chr q21.2 Transcription factor q15.2 108814 ChimerSeq ChiTaRs ChiTaRs CCNB1-ULK4 CCNB1 chr5 68467260 ULK4 chr3 41357878 Exonic hg19 NA BI042339 Out-of-frame Inter-chr q13.2 p22.1 Other:ULK 108815 ChimerSeq ChiTaRs ChiTaRs CUL3-PRRC1 CUL3 chr2 225343064 PRRC1 chr5 126888855 Exonic hg19 NA DA731200 Out-of-frame Inter-chr q36.2 q23.2 108816 ChimerSeq ChiTaRs ChiTaRs RBMX-BRF2 RBMX chrX 135961429 BRF2 chr8 37704489 Exonic hg19 NA DA076836 Out-of-frame Inter-chr q26.3 Tumor suppressor gene p11.23 Tumor suppressor gene Transcription factor 108817 ChimerSeq ChiTaRs ChiTaRs C1orf115-DHX40 C1orf115 chr1 220871339 DHX40 chr17 57676766 Exonic hg19 NA BI033174 Out-of-frame Inter-chr q41 q23.1 108818 ChimerSeq ChiTaRs ChiTaRs HIST1H2BK-HSP90AA1 HIST1H2BK chr6 27114600 HSP90AA1 chr14 102547550 Exonic hg19 NA BM741320 Out-of-frame Inter-chr p22.1 q32.31 Oncogene 108819 ChimerSeq ChiTaRs ChiTaRs TTC21A-SALL2 TTC21A chr3 39180391 SALL2 chr14 21993571 Exonic hg19 NA AW450316 Out-of-frame Inter-chr p22.2 q11.2 Tumor suppressor gene Transcription factor 108820 ChimerSeq ChiTaRs ChiTaRs SH3BGRL3-TPM3 SH3BGRL3 chr1 26608013 TPM3 chr1 154130055 Exonic hg19 NA CA417208 3'UTR-3'UTR Intra-chr p36.11 q21.3 108821 ChimerSeq ChiTaRs ChiTaRs FTH1-AVL9 FTH1 chr11 61735103 AVL9 chr7 33059247 Exonic hg19 NA BG527923 Out-of-frame Inter-chr q12.3 p14.3 108822 ChimerSeq ChiTaRs ChiTaRs CADPS2-ARMCX6 CADPS2 chr7 122526514 ARMCX6 chrX 100870116 Exonic hg19 NA AK098170 Out-of-frame Inter-chr q31.32 q22.1 108823 ChimerSeq ChiTaRs ChiTaRs ALDH1A1-ELL ALDH1A1 chr9 75652625 ELL chr19 18555203 Exonic hg19 NA AI493829 Out-of-frame Inter-chr q21.13 p13.11 108824 ChimerSeq ChiTaRs ChiTaRs CTDSP1-RPS5 CTDSP1 chr2 219264765 RPS5 chr19 58904350 Exonic hg19 NA BQ432456 Out-of-frame Inter-chr q35 q13.43 108825 ChimerSeq ChiTaRs ChiTaRs TOR1AIP2-IL4I1 TOR1AIP2 chr1 179831795 IL4I1 chr19 50412982 Exonic hg19 NA AA573236 Out-of-frame Inter-chr q25.2 q13.33 108826 ChimerSeq ChiTaRs ChiTaRs MTHFD1L-RNU5E-1 MTHFD1L chr6 151220136 RNU5E-1 chr5 80548500 Exonic hg19 NA AI311578 Out-of-frame Inter-chr q25.1 p36.22 108827 ChimerSeq ChiTaRs ChiTaRs SNHG3-CUL2 SNHG3 chr1 28834672 CUL2 chr10 35333737 Exonic hg19 NA BG256861 5'UTR-CDS Inter-chr p35.3 p11.21 Tumor suppressor gene 108828 ChimerSeq ChiTaRs ChiTaRs ZYX-WBSCR22 ZYX chr7 143088201 WBSCR22 chr7 73097958 Exonic hg19 NA CK299603 Out-of-frame Intra-chr q34 Tumor suppressor gene 108829 ChimerSeq ChiTaRs ChiTaRs GPM6A-ANKRD17 GPM6A chr4 176573032 ANKRD17 chr4 74000895 Exonic hg19 NA AA350181 Out-of-frame Intra-chr q34.2 q13.3 108830 ChimerSeq ChiTaRs ChiTaRs ELOVL1-NFASC ELOVL1 chr1 43833678 NFASC chr1 204986628 Exonic hg19 NA BP218140 Out-of-frame Intra-chr p34.2 q32.1 108831 ChimerSeq ChiTaRs ChiTaRs PER3-TP53I11 PER3 chr1 7887697 TP53I11 chr11 44955520 Exonic hg19 NA BM546204 Out-of-frame Inter-chr p36.23 p11.2 108832 ChimerSeq ChiTaRs ChiTaRs CYP17A1-LHFP CYP17A1 chr10 104593881 LHFP chr13 39917445 Exonic hg19 NA AV706830 Out-of-frame Inter-chr q24.32 q14.11 108833 ChimerSeq ChiTaRs ChiTaRs PKP4-PSEN1 PKP4 chr2 159535154 PSEN1 chr14 73686042 Exonic hg19 NA BE090298 Out-of-frame Inter-chr q24.1 q24.2 108834 ChimerSeq ChiTaRs ChiTaRs CELF2-NBEA CELF2 chr10 11376427 NBEA chr13 36048340 Exonic hg19 NA U38810 Out-of-frame Inter-chr p14 q13.3 108835 ChimerSeq ChiTaRs ChiTaRs HMGN3-TMEM5 HMGN3 chr6 79944296 TMEM5 chr12 64202453 Exonic hg19 NA CK822740 Out-of-frame Inter-chr q14.1 Transcription factor q14.2 108836 ChimerSeq ChiTaRs ChiTaRs IWS1-SREK1 IWS1 chr2 128261099 SREK1 chr5 65466566 Exonic hg19 NA BU600561 Out-of-frame Inter-chr q14.3 q12.3 108837 ChimerSeq ChiTaRs ChiTaRs SNHG1-SRPR SNHG1 chr11 62621435 SRPR chr11 126136495 Exonic hg19 NA DA280072 Out-of-frame Intra-chr q12.3 108838 ChimerSeq ChiTaRs ChiTaRs ZNF124-PSG6 ZNF124 chr1 247292498 PSG6 chr19 43699266 Exonic hg19 NA AA367923 Out-of-frame Inter-chr q44 Transcription factor q13.31 108839 ChimerSeq ChiTaRs ChiTaRs ALB-ZDHHC2 ALB chr4 74286029 ZDHHC2 chr8 17078894 Exonic hg19 NA AI133546 Out-of-frame Inter-chr q13.3 p22 Tumor suppressor gene 108840 ChimerSeq ChiTaRs ChiTaRs ABHD14B-APLP1 ABHD14B chr3 52014918 APLP1 chr19 36362518 Exonic hg19 NA BI037742 Out-of-frame Inter-chr p21.2 q13.12 108841 ChimerSeq ChiTaRs ChiTaRs CLDN1-C3 CLDN1 chr3 190024282 C3 chr19 6717313 Exonic hg19 NA AI133078 Out-of-frame Inter-chr q28 Tumor suppressor gene p13.3 108842 ChimerSeq ChiTaRs ChiTaRs MAML3-POU3F2 MAML3 chr4 141287934 POU3F2 chr6 99283155 Exonic hg19 NA BF127989 Out-of-frame Inter-chr q31.1 q16.1 Transcription factor 108843 ChimerSeq ChiTaRs ChiTaRs ABP1-KIAA1549L ABP1 chr7 150556270 KIAA1549L chr11 33571789 Exonic hg19 NA AI815581 Out-of-frame Inter-chr p13 108844 ChimerSeq ChiTaRs ChiTaRs AZIN1-AEBP2 AZIN1 chr8 103876348 AEBP2 chr12 19592799 Exonic hg19 NA AA765801 Out-of-frame Inter-chr q22.3 p12.3 Transcription factor 108845 ChimerSeq ChiTaRs ChiTaRs CALU-GPR19 CALU chr7 128410636 GPR19 chr12 12815346 Exonic hg19 NA BF057219 Out-of-frame Inter-chr q32.1 p13.1 108846 ChimerSeq ChiTaRs ChiTaRs DANCR-TBC1D10A DANCR chr4 53579127 TBC1D10A chr22 30690784 Exonic hg19 NA BI089294 5'UTR-CDS Inter-chr q12 q12.2 108847 ChimerSeq ChiTaRs ChiTaRs ARMC2-GPR173 ARMC2 chr6 109197555 GPR173 chrX 53105706 Exonic hg19 NA DN991840 CDS-5'UTR Inter-chr q21 p11.22 108848 ChimerSeq ChiTaRs ChiTaRs MYD88-INO80B MYD88 chr3 38182652 INO80B chr2 74687551 Exonic hg19 NA BE144273 Out-of-frame Inter-chr p22.2 Oncogene p13.1 108849 ChimerSeq ChiTaRs ChiTaRs FAM134A-RUNX1T1 FAM134A chr2 220046947 RUNX1T1 chr8 93035403 Exonic hg19 NA DA110499 Out-of-frame Inter-chr q21.3 Oncogene 108850 ChimerSeq ChiTaRs ChiTaRs TOPORS-SNHG8 TOPORS chr9 32543339 SNHG8 chr4 119199915 Exonic hg19 NA BF094191 Out-of-frame Inter-chr p21.1 Tumor suppressor gene Transcription factor q26 108851 ChimerSeq ChiTaRs ChiTaRs SH3PXD2A-HTRA1 SH3PXD2A chr10 105495523 HTRA1 chr10 124248414 Exonic hg19 NA AV734257 Out-of-frame Intra-chr q24.33 q26.13 Tumor suppressor gene KB Pub 108852 ChimerSeq ChiTaRs ChiTaRs XRN1-GNPTAB XRN1 chr3 142029312 GNPTAB chr12 102139335 Exonic hg19 NA BE671625 Out-of-frame Inter-chr q23 q23.2 108853 ChimerSeq ChiTaRs ChiTaRs TIMMDC1-RBL2 TIMMDC1 chr3 119242913 RBL2 chr16 53515668 Exonic hg19 NA CA429191 Out-of-frame Inter-chr q13.33 q12.2 Tumor suppressor gene 108854 ChimerSeq ChiTaRs ChiTaRs PDGFRA-PRG2 PDGFRA chr4 55163461 PRG2 chr11 57174431 Exonic hg19 NA AA047624 Out-of-frame Inter-chr q12 Oncogene q12.1 108855 ChimerSeq ChiTaRs ChiTaRs GATAD2B-DPY19L2P2 GATAD2B chr1 153780307 DPY19L2P2 chr7 102902788 Exonic hg19 NA BI009511 Out-of-frame Inter-chr Transcription factor 108856 ChimerSeq ChiTaRs ChiTaRs AFF1-ADAM12 AFF1 chr4 87869724 ADAM12 chr10 127806634 Exonic hg19 NA DA857102 Out-of-frame Inter-chr q21.3 Oncogene q26.2 108857 ChimerSeq ChiTaRs ChiTaRs WDR74-ANKS1B WDR74 chr11 62609281 ANKS1B chr12 99830582 Exonic hg19 NA DB042957 Out-of-frame Inter-chr q12.3 q23.1 108858 ChimerSeq ChiTaRs ChiTaRs WTAP-CBR4 WTAP chr6 160169280 CBR4 chr4 169916726 Exonic hg19 NA BF930782 Out-of-frame Inter-chr q25.3 q32.3 108859 ChimerSeq ChiTaRs ChiTaRs LBH-F3 LBH chr2 30482890 F3 chr1 94994974 Exonic hg19 NA BF109813 Out-of-frame Inter-chr p23.1 p21.3 108860 ChimerSeq ChiTaRs ChiTaRs PDE4D-SLC16A9 PDE4D chr5 59064280 SLC16A9 chr10 61414072 Exonic hg19 NA DB236218 Out-of-frame Inter-chr q12.1 q21.2 108861 ChimerSeq ChiTaRs ChiTaRs DGUOK-PRKD2 DGUOK chr2 74185304 PRKD2 chr19 47197249 Exonic hg19 NA BM750642 Out-of-frame Inter-chr p13.1 q13.32 108862 ChimerSeq ChiTaRs ChiTaRs BEX4-FAM13A BEX4 chrX 102470153 FAM13A chr4 89668900 Exonic hg19 NA DA786663 Out-of-frame Inter-chr q22.1 q22.1 108863 ChimerSeq ChiTaRs ChiTaRs HSD17B4-COPS3 HSD17B4 chr5 118865606 COPS3 chr17 17150204 Exonic hg19 NA BF033554 Out-of-frame Inter-chr q23.1 p11.2 108864 ChimerSeq ChiTaRs ChiTaRs POLE3-LRRC58 POLE3 chr9 116169848 LRRC58 chr3 120044647 Exonic hg19 NA BQ020441 Out-of-frame Inter-chr q32 q13.33 108865 ChimerSeq ChiTaRs ChiTaRs FCHO2-CSH1 FCHO2 chr5 72377774 CSH1 chr17 61972275 Exonic hg19 NA AK056770 Out-of-frame Inter-chr q13.2 q23.3 108866 ChimerSeq ChiTaRs ChiTaRs PABPC1-PABPC1 PABPC1 chr8 101724949 PABPC1 chr8 101724944 Exonic hg19 NA AW880952 Out-of-frame Intra-chr q22.3 q22.3 108867 ChimerSeq ChiTaRs ChiTaRs ZNF672-ECE1 ZNF672 chr1 249143229 ECE1 chr1 21544467 Exonic hg19 NA BE336604 Out-of-frame Intra-chr q44 Transcription factor p36.12 108868 ChimerSeq ChiTaRs ChiTaRs SNHG1-EHD1 SNHG1 chr11 62621437 EHD1 chr11 64645569 Exonic hg19 NA DB092887 Out-of-frame Intra-chr q12.3 q13.1 108869 ChimerSeq ChiTaRs ChiTaRs PHC3-SPACA3 PHC3 chr3 169899535 SPACA3 chr17 31322450 Exonic hg19 NA AK302371 Out-of-frame Inter-chr q26.2 Tumor suppressor gene q11.2 108870 ChimerSeq ChiTaRs ChiTaRs LPHN2-FLNA LPHN2 chr1 82089552 FLNA chrX 153595099 Exonic hg19 NA BF893178 5'UTR-CDS Inter-chr q28 Tumor suppressor gene 108871 ChimerSeq ChiTaRs ChiTaRs HIST1H2BC-SECISBP2 HIST1H2BC chr6 26124134 SECISBP2 chr9 91972326 Exonic hg19 NA BI767701 Out-of-frame Inter-chr p22.2 q22.2 108872 ChimerSeq ChiTaRs ChiTaRs CHRAC1-SBNO1 CHRAC1 chr8 141526796 SBNO1 chr12 123794056 Exonic hg19 NA AI652957 Out-of-frame Inter-chr q24.3 q24.31 108873 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-NPIPB7 INS-IGF2 chr11 2151418 NPIPB7 chr16 28734520 Exonic hg19 NA BQ647417 Out-of-frame Inter-chr p15.5 p12.1 Oncogene 108874 ChimerSeq ChiTaRs ChiTaRs BDP1-KDM5A BDP1 chr5 70811993 KDM5A chr12 402129 Exonic hg19 NA CB119428 Out-of-frame Inter-chr p13.33 Tumor suppressor gene 108875 ChimerSeq ChiTaRs ChiTaRs TNKS-GPC3 TNKS chr8 9637105 GPC3 chrX 132669781 Exonic hg19 NA R64084 Out-of-frame Inter-chr p23.1 q26.2 Tumor suppressor gene 108876 ChimerSeq ChiTaRs ChiTaRs CDK11B-FZR1 CDK11B chr1 1655738 FZR1 chr19 3525948 Exonic hg19 NA BI905981 Out-of-frame Inter-chr p36.33 p13.3 Oncogene Tumor suppressor gene 108877 ChimerSeq ChiTaRs ChiTaRs PGD-C11orf24 PGD chr1 10471601 C11orf24 chr11 68029511 Exonic hg19 NA BF032755 Out-of-frame Inter-chr p36.22 q13.2 108878 ChimerSeq ChiTaRs ChiTaRs H19-MRPL21 H19 chr11 2017129 MRPL21 chr11 68665394 Exonic hg19 NA R83431 3'UTR-CDS Intra-chr p15.5 Tumor suppressor gene q13.3 108879 ChimerSeq ChiTaRs ChiTaRs RYR2-CALR RYR2 chr1 237801769 CALR chr19 13055184 Exonic hg19 NA BX501381 Out-of-frame Inter-chr q43 p13.13 108880 ChimerSeq ChiTaRs ChiTaRs BRK1-SIM1 BRK1 chr3 10168138 SIM1 chr6 100841581 Exonic hg19 NA DB024801 Out-of-frame Inter-chr p25.3 q16.3 Transcription factor 108881 ChimerSeq ChiTaRs ChiTaRs ZC3H11A-LYRM2 ZC3H11A chr1 203816421 LYRM2 chr6 90346400 Exonic hg19 NA BC046137 Out-of-frame Inter-chr q32.1 q15 108882 ChimerSeq ChiTaRs ChiTaRs LOC646626-MSL1 LOC646626 chr1 85786010 MSL1 chr17 38291661 Exonic hg19 NA DA512413 Out-of-frame Inter-chr q21.1 108883 ChimerSeq ChiTaRs ChiTaRs BCLAF1-SEMA6A BCLAF1 chr6 136579982 SEMA6A chr5 115779656 Exonic hg19 NA AA738373 Out-of-frame Inter-chr q23.3 q23.1 108884 ChimerSeq ChiTaRs ChiTaRs TNFSF10-CES4A TNFSF10 chr3 172223563 CES4A chr16 67022598 Exonic hg19 NA AI949486 Out-of-frame Inter-chr q26.31 q22.1 108885 ChimerSeq ChiTaRs ChiTaRs SAA3P-GYS2 SAA3P chr11 18270182 GYS2 chr12 21689697 Exonic hg19 NA BG563177 Out-of-frame Inter-chr p15.1 p12.1 108886 ChimerSeq ChiTaRs ChiTaRs WDR74-TMEM25 WDR74 chr11 62609281 TMEM25 chr11 118401916 Exonic hg19 NA DA396739 Out-of-frame Intra-chr q12.3 q23.3 108887 ChimerSeq ChiTaRs ChiTaRs DPYSL5-RNF103-CHMP3 DPYSL5 chr2 27173219 RNF103-CHMP3 chr2 86831082 Exonic hg19 NA AI655301 Out-of-frame Intra-chr p23.3 p11.2 108888 ChimerSeq ChiTaRs ChiTaRs MYOT-GULP1 MYOT chr5 137089363 GULP1 chr2 189433968 Exonic hg19 NA BE972596 Out-of-frame Inter-chr q31.2 q32.1 108889 ChimerSeq ChiTaRs ChiTaRs SNHG1-SNX2 SNHG1 chr11 62621434 SNX2 chr5 122110701 Exonic hg19 NA DC338761 Out-of-frame Inter-chr q12.3 q23.2 108890 ChimerSeq ChiTaRs ChiTaRs MLLT10-PICALM MLLT10 chr10 21860955 PICALM chr11 85670030 Exonic hg19 NA AF060929 Out-of-frame Inter-chr p12.31 Oncogene q14.2 KB Pub Seq+ 108891 ChimerSeq ChiTaRs ChiTaRs STRN-TGFBR2 STRN chr2 37097536 TGFBR2 chr3 30648321 Exonic hg19 NA D50683 Out-of-frame Inter-chr p22.2 p24.1 Oncogene Tumor suppressor gene 108892 ChimerSeq ChiTaRs ChiTaRs IGFBP5-PRC1 IGFBP5 chr2 217537525 PRC1 chr15 91524114 Exonic hg19 NA BM718742 Out-of-frame Inter-chr q35 Tumor suppressor gene q26.1 108893 ChimerSeq ChiTaRs ChiTaRs ENAH-COL1A1 ENAH chr1 225687628 COL1A1 chr17 48277116 Exonic hg19 NA CN342237 Out-of-frame Inter-chr q42.12 q21.33 Oncogene 108894 ChimerSeq ChiTaRs ChiTaRs HCG25-EEF1A1 HCG25 chr6 4471867 EEF1A1 chr6 74227238 Exonic hg19 NA BC013012 Out-of-frame Intra-chr q13 Tumor suppressor gene 108895 ChimerSeq ChiTaRs ChiTaRs CD74-ASCC2 CD74 chr5 149781483 ASCC2 chr22 30184600 Exonic hg19 NA BP394862 Out-of-frame Inter-chr q33.1 q12.2 108896 ChimerSeq ChiTaRs ChiTaRs RPS8-USP47 RPS8 chr1 45241605 USP47 chr11 11970041 Exonic hg19 NA BG565964 Out-of-frame Inter-chr p34.1 p15.3 108897 ChimerSeq ChiTaRs ChiTaRs KAZN-COL12A1 KAZN chr1 15444539 COL12A1 chr6 75829120 Exonic hg19 NA BF108734 Out-of-frame Inter-chr p36.21 q14.1 108898 ChimerSeq ChiTaRs ChiTaRs PRKCQ-RSU1 PRKCQ chr10 6622227 RSU1 chr10 16794544 Exonic hg19 NA DA408247 Out-of-frame Intra-chr p15.1 p13 108899 ChimerSeq ChiTaRs ChiTaRs MS4A7-PIK3R5 MS4A7 chr11 60157054 PIK3R5 chr17 8818109 Exonic hg19 NA BM549901 Out-of-frame Inter-chr q12.2 p13.1 108900 ChimerSeq ChiTaRs ChiTaRs HSPB1-RAPGEF5 HSPB1 chr7 75932104 RAPGEF5 chr7 22159500 Exonic hg19 NA DA283619 Out-of-frame Intra-chr q11.23 p15.3 108901 ChimerSeq ChiTaRs ChiTaRs USP6NL-SPIN1 USP6NL chr10 11606636 SPIN1 chr9 91092902 Exonic hg19 NA BE702115 Out-of-frame Inter-chr p14 q22.1 108902 ChimerSeq ChiTaRs ChiTaRs NKX6-3-RNF185 NKX6-3 chr8 41512636 RNF185 chr22 31602832 Exonic hg19 NA W93236 Out-of-frame Inter-chr p11.21 q12.2 108903 ChimerSeq ChiTaRs ChiTaRs MAP3K13-LOC100507412 MAP3K13 chr3 185136139 LOC100507412 chr? 109565 Exonic hg19 NA BP256075 Out-of-frame Inter-chr q27.2 108904 ChimerSeq ChiTaRs ChiTaRs TNFRSF14-C1QA TNFRSF14 chr1 2495268 C1QA chr1 22964215 Exonic hg19 NA AI739187 Out-of-frame Intra-chr p36.32 Oncogene p36.12 108905 ChimerSeq ChiTaRs ChiTaRs PTGS1-SYNPO2 PTGS1 chr9 125155581 SYNPO2 chr4 119952172 Exonic hg19 NA AI972452 Out-of-frame Inter-chr q33.2 q26 Tumor suppressor gene 108906 ChimerSeq ChiTaRs ChiTaRs IFFO2-AP3M1 IFFO2 chr1 19230956 AP3M1 chr10 75883115 Exonic hg19 NA BM674632 Out-of-frame Inter-chr p36.13 q22.2 108907 ChimerSeq ChiTaRs ChiTaRs CCT4-AGA CCT4 chr2 62095687 AGA chr4 178351924 Exonic hg19 NA X55330 Out-of-frame Inter-chr p15 q34.3 108908 ChimerSeq ChiTaRs ChiTaRs HBG1-ANXA7 HBG1 chr11 5271089 ANXA7 chr10 75135588 Exonic hg19 NA BG527983 Out-of-frame Inter-chr p15.4 q22.2 Tumor suppressor gene 108909 ChimerSeq ChiTaRs ChiTaRs CDKL5-SH3KBP1 CDKL5 chrX 18528975 SH3KBP1 chrX 19663571 Exonic hg19 NA DA672235 Out-of-frame Intra-chr p22.13 CMGC:CDKL p22.12 108910 ChimerSeq ChiTaRs ChiTaRs TBC1D8-CAMTA1 TBC1D8 chr2 101654943 CAMTA1 chr1 6880239 Exonic hg19 NA H96278 Out-of-frame Inter-chr q11.2 p36.31 Tumor suppressor gene Transcription factor 108911 ChimerSeq ChiTaRs ChiTaRs LOC257358-MYOT LOC257358 chr5 169762052 MYOT chr5 137087266 Exonic hg19 NA BE897038 Out-of-frame Intra-chr q31.2 108912 ChimerSeq ChiTaRs ChiTaRs REV3L-PPA2 REV3L chr6 111711385 PPA2 chr4 106290724 Exonic hg19 NA DB572905 Out-of-frame Inter-chr q21 q24 108913 ChimerSeq ChiTaRs ChiTaRs NSA2-NSA2 NSA2 chr5 74066511 NSA2 chr5 74066493 Exonic hg19 NA BF434324 Out-of-frame Intra-chr q13.3 q13.3 108914 ChimerSeq ChiTaRs ChiTaRs RBM6-CDK6 RBM6 chr3 50114682 CDK6 chr7 92235094 Exonic hg19 NA BQ014067 Out-of-frame Inter-chr p21.31 Tumor suppressor gene q21.2 CMGC:CDK Oncogene Tumor suppressor gene 108915 ChimerSeq ChiTaRs ChiTaRs GARS-WAPAL GARS chr7 30673526 WAPAL chr10 88206100 Exonic hg19 NA BQ007553 Out-of-frame Inter-chr p14.3 108916 ChimerSeq ChiTaRs ChiTaRs TRUB2-TAPBP TRUB2 chr9 131071574 TAPBP chr6 4742993 Exonic hg19 NA BU623091 Out-of-frame Inter-chr q34.11 108917 ChimerSeq ChiTaRs ChiTaRs SPTBN1-RPS4X SPTBN1 chr2 54885078 RPS4X chrX 71492475 Exonic hg19 NA BQ325055 Out-of-frame Inter-chr p16.2 Tumor suppressor gene q13.1 108918 ChimerSeq ChiTaRs ChiTaRs CDK14-MIPOL1 CDK14 chr7 90836613 MIPOL1 chr14 37688874 Exonic hg19 NA BU561606 Out-of-frame Inter-chr q21.13 q13.3 108919 ChimerSeq ChiTaRs ChiTaRs PAX5-ZNF521 PAX5 chr9 37034075 ZNF521 chr18 22642503 Exonic hg19 NA DQ845345 Out-of-frame Inter-chr p13.2 Oncogene Tumor suppressor gene Transcription factor q11.2 Oncogene Transcription factor 108920 ChimerSeq ChiTaRs ChiTaRs AHI1-GLS AHI1 chr6 135818812 GLS chr2 191765290 Exonic hg19 NA DA400572 Out-of-frame Inter-chr q23.3 q32.2 Tumor suppressor gene 108921 ChimerSeq ChiTaRs ChiTaRs LAMC1-WNK1 LAMC1 chr1 183104244 WNK1 chr12 1019290 Exonic hg19 NA BG000564 Out-of-frame Inter-chr q25.3 p13.33 108922 ChimerSeq ChiTaRs ChiTaRs PCYOX1-MAST3 PCYOX1 chr2 70506593 MAST3 chr19 18261082 Exonic hg19 NA BQ876631 Out-of-frame Inter-chr p13.3 p13.11 AGC:MAST 108923 ChimerSeq ChiTaRs ChiTaRs ANKHD1-HMGXB4 ANKHD1 chr5 139903760 HMGXB4 chr22 35661385 Exonic hg19 NA AW579419 Out-of-frame Inter-chr q31.3 q12.3 108924 ChimerSeq ChiTaRs ChiTaRs HEYL-ENTPD6 HEYL chr1 40091984 ENTPD6 chr20 25206438 Exonic hg19 NA BE270227 Out-of-frame Inter-chr p34.2 Transcription factor p11.21 108925 ChimerSeq ChiTaRs ChiTaRs ANP32E-FAM13A-AS1 ANP32E chr1 150202953 FAM13A-AS1 chr4 89648527 Exonic hg19 NA BF367648 Out-of-frame Inter-chr q21.2 q22.1 108926 ChimerSeq ChiTaRs ChiTaRs MED14-CDR2L MED14 chrX 40522377 CDR2L chr17 73001246 Exonic hg19 NA BM796903 Out-of-frame Inter-chr p11.4 q25.1 108927 ChimerSeq ChiTaRs ChiTaRs HFM1-NPIPB7 HFM1 chr1 91853064 NPIPB7 chr16 28854110 Exonic hg19 NA AV702479 Out-of-frame Inter-chr p22.2 p12.1 108928 ChimerSeq ChiTaRs ChiTaRs ENY2-TSSK3 ENY2 chr8 110346691 TSSK3 chr1 32827862 Exonic hg19 NA CB129156 Out-of-frame Inter-chr q23.1 p35.1 CAMK:TSSK 108929 ChimerSeq ChiTaRs ChiTaRs MUC5B-MLEC MUC5B chr11 1271533 MLEC chr12 121139214 Exonic hg19 NA BG955818 Out-of-frame Inter-chr p15.5 q24.31 108930 ChimerSeq ChiTaRs ChiTaRs TSPAN7-GPR125 TSPAN7 chrX 38530689 GPR125 chr4 22512366 Exonic hg19 NA BP251862 Out-of-frame Inter-chr p11.4 108931 ChimerSeq ChiTaRs ChiTaRs NRCAM-ADORA1 NRCAM chr7 107939268 ADORA1 chr1 203096868 Exonic hg19 NA X68485 Out-of-frame Inter-chr q31.1 Tumor suppressor gene q32.1 108932 ChimerSeq ChiTaRs ChiTaRs GCA-SH3TC1 GCA chr2 163200786 SH3TC1 chr4 8233702 Exonic hg19 NA BI518724 Out-of-frame Inter-chr q24.2 p16.1 108933 ChimerSeq ChiTaRs ChiTaRs GNB2L1-SHANK2 GNB2L1 chr5 180670747 SHANK2 chr11 70486417 Exonic hg19 NA BE814246 Out-of-frame Inter-chr Tumor suppressor gene q13.4 108934 ChimerSeq ChiTaRs ChiTaRs ADIPOQ-PCNT ADIPOQ chr3 186576252 PCNT chr21 47851520 Exonic hg19 NA CA427200 3'UTR-CDS Inter-chr q27.3 q22.3 108935 ChimerSeq ChiTaRs ChiTaRs RANBP2-INPP5B RANBP2 chr2 109401258 INPP5B chr1 38327455 Exonic hg19 NA CR738758 Out-of-frame Inter-chr q13 p34.3 108936 ChimerSeq ChiTaRs ChiTaRs PRR15-MAP7D1 PRR15 chr7 29606082 MAP7D1 chr1 36646379 Exonic hg19 NA AA773931 Out-of-frame Inter-chr p14.3 p34.3 108937 ChimerSeq ChiTaRs ChiTaRs STEAP2-PDCD4 STEAP2 chr7 89863908 PDCD4 chr10 112659513 Exonic hg19 NA AY008445 Out-of-frame Inter-chr q21.13 q25.2 Tumor suppressor gene 108938 ChimerSeq ChiTaRs ChiTaRs HDDC2-RPS6KC1 HDDC2 chr6 125597391 RPS6KC1 chr1 213290660 Exonic hg19 NA AA626066 Out-of-frame Inter-chr q22.31 q32.3 108939 ChimerSeq ChiTaRs ChiTaRs MIR548N-GOT2 MIR548N chr2 179438369 GOT2 chr16 58741037 Exonic hg19 NA AK129856 Out-of-frame Inter-chr p14.2 q21 108940 ChimerSeq ChiTaRs ChiTaRs PTPN18-WIPI1 PTPN18 chr2 131131756 WIPI1 chr17 66417812 Exonic hg19 NA BE694982 Out-of-frame Inter-chr q21.1 q24.2 108941 ChimerSeq ChiTaRs ChiTaRs ACTB-HERPUD2 ACTB chr7 5568916 HERPUD2 chr7 35672919 Exonic hg19 NA BM352323 Out-of-frame Intra-chr p22.1 p14.2 108942 ChimerSeq ChiTaRs ChiTaRs COPS7B-RAB13 COPS7B chr2 232672371 RAB13 chr1 153955235 Exonic hg19 NA CN310211 Out-of-frame Inter-chr q37.1 q21.3 108943 ChimerSeq ChiTaRs ChiTaRs LDHA-EIF4EBP2 LDHA chr11 18429394 EIF4EBP2 chr10 72163813 Exonic hg19 NA CA414218 Out-of-frame Inter-chr p15.1 q22.1 108944 ChimerSeq ChiTaRs ChiTaRs CEP78-EIF4G3 CEP78 chr9 80886278 EIF4G3 chr1 21181477 Exonic hg19 NA AU132189 Out-of-frame Inter-chr q21.2 p36.12 108945 ChimerSeq ChiTaRs ChiTaRs JAZF1-CTNNA1 JAZF1 chr7 28220383 CTNNA1 chr5 138089112 Exonic hg19 NA DC422616 Out-of-frame Inter-chr p15.1 Transcription factor q31.2 Oncogene 108946 ChimerSeq ChiTaRs ChiTaRs JUN-SLC25A1 JUN chr1 59249716 SLC25A1 chr22 19164999 Exonic hg19 NA CD614306 Out-of-frame Inter-chr p32.1 Oncogene Transcription factor q11.21 108947 ChimerSeq ChiTaRs ChiTaRs SH3BP4-SRSF1 SH3BP4 chr2 235950389 SRSF1 chr17 56081190 Exonic hg19 NA BP424923 Out-of-frame Inter-chr q37.2 q22 108948 ChimerSeq ChiTaRs ChiTaRs FBXW2-HDGF FBXW2 chr9 123526777 HDGF chr1 156711901 Exonic hg19 NA BG340155 Out-of-frame Inter-chr q33.2 q23.1 108949 ChimerSeq ChiTaRs ChiTaRs WDR74-GNAI3 WDR74 chr11 62609281 GNAI3 chr1 110091206 Exonic hg19 NA DA363950 Out-of-frame Inter-chr q12.3 p13.3 108950 ChimerSeq ChiTaRs ChiTaRs PSMD2-YBX2 PSMD2 chr3 184017189 YBX2 chr17 7191584 Exonic hg19 NA CA336584 CDS-3'UTR Inter-chr q27.1 p13.1 Transcription factor 108951 ChimerSeq ChiTaRs ChiTaRs SRI-PTRF SRI chr7 87839428 PTRF chr17 40555971 Exonic hg19 NA BU173706 Out-of-frame Inter-chr q21.12 108952 ChimerSeq ChiTaRs ChiTaRs RPLP0P2-PEG10 RPLP0P2 chr11 61405204 PEG10 chr7 94292796 Exonic hg19 NA AI678051 Out-of-frame Inter-chr q12.2 q21.3 108953 ChimerSeq ChiTaRs ChiTaRs DKC1-NKIRAS1 DKC1 chrX 154005576 NKIRAS1 chr3 23961220 Exonic hg19 NA BI000195 Out-of-frame Inter-chr q28 p24.2 108954 ChimerSeq ChiTaRs ChiTaRs KIAA2026-MMACHC KIAA2026 chr9 5929160 MMACHC chr1 45976724 Exonic hg19 NA AX746943 Out-of-frame Inter-chr p24.1 p34.1 108955 ChimerSeq ChiTaRs ChiTaRs WDR74-SEPT8 WDR74 chr11 62609281 2008_ 9_ 1_ chr5 132093630 Exonic hg19 NA DA293481 Out-of-frame Inter-chr q12.3 108956 ChimerSeq ChiTaRs ChiTaRs LAMB4-COBLL1 LAMB4 chr7 107677931 COBLL1 chr2 165541255 Exonic hg19 NA AK075165 Out-of-frame Inter-chr q31.1 q24.3 108957 ChimerSeq ChiTaRs ChiTaRs SLC50A1-SLC1A2 SLC50A1 chr1 155108396 SLC1A2 chr11 35279728 Exonic hg19 NA DA269573 Out-of-frame Inter-chr q22 p13 108958 ChimerSeq ChiTaRs ChiTaRs NAP1L4-TTC12 NAP1L4 chr11 2985064 TTC12 chr11 113185313 Exonic hg19 NA DB028446 Out-of-frame Intra-chr q23.2 108959 ChimerSeq ChiTaRs ChiTaRs PPAPDC1B-RPL3 PPAPDC1B chr8 38125533 RPL3 chr22 39713598 Exonic hg19 NA BM972994 Out-of-frame Inter-chr q13.1 108960 ChimerSeq ChiTaRs ChiTaRs TRIM24-NTN4 TRIM24 chr7 138270333 NTN4 chr12 96076491 Exonic hg19 NA AI027770 Out-of-frame Inter-chr q33 Oncogene Tumor suppressor gene q22 108961 ChimerSeq ChiTaRs ChiTaRs HADH-ATP5B HADH chr4 108955967 ATP5B chr12 57031962 Exonic hg19 NA AW375766 Out-of-frame Inter-chr q25 q13.3 108962 ChimerSeq ChiTaRs ChiTaRs CAMTA1-UMODL1 CAMTA1 chr1 7553463 UMODL1 chr21 43542778 Exonic hg19 NA EL582469 Out-of-frame Inter-chr p36.31 Tumor suppressor gene Transcription factor q22.3 108963 ChimerSeq ChiTaRs ChiTaRs C6orf47-EPHX1 C6orf47 chr6 2957246 EPHX1 chr1 226026353 Exonic hg19 NA AI636871 Out-of-frame Inter-chr q42.12 108964 ChimerSeq ChiTaRs ChiTaRs PDIA5-SLC25A5 PDIA5 chr3 122869127 SLC25A5 chrX 118603640 Exonic hg19 NA CX752117 Out-of-frame Inter-chr q21.1 q24 108965 ChimerSeq ChiTaRs ChiTaRs C9orf152-NDE1 C9orf152 chr9 112969822 NDE1 chr16 15796994 Exonic hg19 NA AX747595 Out-of-frame Inter-chr q31.3 p13.11 108966 ChimerSeq ChiTaRs ChiTaRs BAZ2B-FAP BAZ2B chr2 160473020 FAP chr2 163081993 Exonic hg19 NA DA795303 Out-of-frame Intra-chr q24.2 Transcription factor q24.2 108967 ChimerSeq ChiTaRs ChiTaRs MRPS25-SEC23B MRPS25 chr3 15093835 SEC23B chr20 18496290 Exonic hg19 NA AI332698 Out-of-frame Inter-chr p25.1 p11.23 108968 ChimerSeq ChiTaRs ChiTaRs SH3BGRL3-BTF3 SH3BGRL3 chr1 26607638 BTF3 chr5 72798796 Exonic hg19 NA BF983793 Out-of-frame Inter-chr p36.11 q13.2 108969 ChimerSeq ChiTaRs ChiTaRs HNRNPA2B1-HNRNPUL1 HNRNPA2B1 chr7 26236578 HNRNPUL1 chr19 41810020 Exonic hg19 NA BE397591 Out-of-frame Inter-chr p15.2 q13.2 108970 ChimerSeq ChiTaRs ChiTaRs FGFR4-MALAT1 FGFR4 chr5 176525127 MALAT1 chr11 65268060 Exonic hg19 NA AI292351 Out-of-frame Inter-chr q35.2 TK:FGFR Oncogene q13.1 108971 ChimerSeq ChiTaRs ChiTaRs LOC100188947-TXNDC12 LOC100188947 chr10 93256129 TXNDC12 chr1 52485826 Exonic hg19 NA BC071762 Out-of-frame Inter-chr p32.3 108972 ChimerSeq ChiTaRs ChiTaRs PCGF3-FAM156B PCGF3 chr4 699761 FAM156B chrX 52977617 Exonic hg19 NA BE311607 Out-of-frame Inter-chr p16.3 p11.22 108973 ChimerSeq ChiTaRs ChiTaRs C2orf61-LOC642776 C2orf61 chr2 47403650 LOC642776 chrX 115052439 Exonic hg19 NA BP374554 Out-of-frame Inter-chr 108974 ChimerSeq ChiTaRs ChiTaRs PRG2-FLNA PRG2 chr11 57194573 FLNA chrX 153576901 Exonic hg19 NA BC003163 Out-of-frame Inter-chr q12.1 q28 Tumor suppressor gene 108975 ChimerSeq ChiTaRs ChiTaRs MLLT10-GNB2L1 MLLT10 chr10 21913012 GNB2L1 chr5 180665135 Exonic hg19 NA BF037541 Out-of-frame Inter-chr p12.31 Oncogene Tumor suppressor gene 108976 ChimerSeq ChiTaRs ChiTaRs ALDH7A1-MRPS15 ALDH7A1 chr5 125930875 MRPS15 chr1 36921372 Exonic hg19 NA BQ649564 Out-of-frame Inter-chr q23.2 p34.3 108977 ChimerSeq ChiTaRs ChiTaRs TRIM56-SNRNP70 TRIM56 chr7 100731366 SNRNP70 chr19 49609222 Exonic hg19 NA AX747810 Out-of-frame Inter-chr q22.1 q13.33 108978 ChimerSeq ChiTaRs ChiTaRs GAGE10-SIAE GAGE10 chrX 49192792 SIAE chr11 124506649 Exonic hg19 NA BF885412 Out-of-frame Inter-chr p11.23 q24.2 108979 ChimerSeq ChiTaRs ChiTaRs SPARC-FN1 SPARC chr5 151043052 FN1 chr2 216226066 Exonic hg19 NA W48576 Out-of-frame Inter-chr q33.1 Tumor suppressor gene q35 Oncogene 108980 ChimerSeq ChiTaRs ChiTaRs SURF6-TTR SURF6 chr9 136198612 TTR chr18 29178568 Exonic hg19 NA AW955743 Out-of-frame Inter-chr q12.1 108981 ChimerSeq ChiTaRs ChiTaRs HIST1H2BC-SECISBP2 HIST1H2BC chr6 26124133 SECISBP2 chr9 91972326 Exonic hg19 NA BC038854 Out-of-frame Inter-chr p22.2 q22.2 108982 ChimerSeq ChiTaRs ChiTaRs SORBS2-CCDC34 SORBS2 chr4 186615862 CCDC34 chr11 27360555 Exonic hg19 NA BM721595 Out-of-frame Inter-chr q35.1 p14.1 108983 ChimerSeq ChiTaRs ChiTaRs SPARC-HIPK3 SPARC chr5 151042404 HIPK3 chr11 33370221 Exonic hg19 NA CA447001 Out-of-frame Inter-chr q33.1 Tumor suppressor gene p13 CMGC:DYRK 108984 ChimerSeq ChiTaRs ChiTaRs ASAP2-USP11 ASAP2 chr2 9491016 USP11 chrX 47092424 Exonic hg19 NA DA220924 Out-of-frame Inter-chr p25.1 p11.3 108985 ChimerSeq ChiTaRs ChiTaRs BCLAF1-PSMB1 BCLAF1 chr6 136610984 PSMB1 chr6 170854940 Exonic hg19 NA DB153796 Out-of-frame Intra-chr q23.3 108986 ChimerSeq ChiTaRs ChiTaRs REV1-ZNF385A REV1 chr2 100094141 ZNF385A chr12 54778212 Exonic hg19 NA DA465008 Out-of-frame Inter-chr q11.2 q13.13 Transcription factor 108987 ChimerSeq ChiTaRs ChiTaRs GPR37L1-PLXNB3 GPR37L1 chr1 202098634 PLXNB3 chrX 153041811 Exonic hg19 NA AI884619 3'UTR-CDS Inter-chr q32.1 q28 108988 ChimerSeq ChiTaRs ChiTaRs AKAP9-GNS AKAP9 chr7 91719642 GNS chr12 65107421 Exonic hg19 NA AI701812 Out-of-frame Inter-chr q21.2 Oncogene q14.3 108989 ChimerSeq ChiTaRs ChiTaRs C7orf49-KIF5B C7orf49 chr7 134851121 KIF5B chr10 32309982 Exonic hg19 NA BE177689 Out-of-frame Inter-chr q33 p11.22 108990 ChimerSeq ChiTaRs ChiTaRs UGDH-RPL7L1 UGDH chr4 39501397 RPL7L1 chr6 42854332 Exonic hg19 NA AW733157 Out-of-frame Inter-chr p14 p21.1 108991 ChimerSeq ChiTaRs ChiTaRs SFPQ-SUMO3 SFPQ chr1 35658511 SUMO3 chr21 46226638 Exonic hg19 NA AA743524 Out-of-frame Inter-chr p34.3 q22.3 108992 ChimerSeq ChiTaRs ChiTaRs SLC4A5-NCOR2 SLC4A5 chr2 74590216 NCOR2 chr12 124819776 Exonic hg19 NA BC020427 Out-of-frame Inter-chr p13.1 q24.31 108993 ChimerSeq ChiTaRs ChiTaRs TSG101-YWHAB TSG101 chr11 18512108 YWHAB chr20 43530206 Exonic hg19 NA BQ961579 Out-of-frame Inter-chr p15.1 Tumor suppressor gene q13.12 108994 ChimerSeq ChiTaRs ChiTaRs NHP2-UBXN6 NHP2 chr5 177576712 UBXN6 chr19 4446341 Exonic hg19 NA BF958189 Out-of-frame Inter-chr q35.3 p13.3 108995 ChimerSeq ChiTaRs ChiTaRs EZR-NBAS EZR chr6 159190894 NBAS chr2 15511096 Exonic hg19 NA BE812183 Out-of-frame Inter-chr q25.3 p24.3 108996 ChimerSeq ChiTaRs ChiTaRs NPM2-CDC16 NPM2 chr8 21892055 CDC16 chr13 115028352 Exonic hg19 NA DA246675 Out-of-frame Inter-chr p21.3 q34 108997 ChimerSeq ChiTaRs ChiTaRs RARS2-HECA RARS2 chr6 88299692 HECA chr6 139495519 Exonic hg19 NA BI833146 Out-of-frame Intra-chr q15 q24.1 Tumor suppressor gene 108998 ChimerSeq ChiTaRs ChiTaRs OTUD5-CHTOP OTUD5 chrX 48814897 CHTOP chr1 153617548 Exonic hg19 NA BQ687057 Out-of-frame Inter-chr p11.23 q21.3 108999 ChimerSeq ChiTaRs ChiTaRs LOC344595-NALCN LOC344595 chr3 107010778 NALCN chr13 101747978 Exonic hg19 NA DA326777 Out-of-frame Inter-chr q33.1 109000 ChimerSeq ChiTaRs ChiTaRs PI4K2A-PFDN5 PI4K2A chr10 99435808 PFDN5 chr12 53691852 Exonic hg19 NA CA307215 Out-of-frame Inter-chr q24.2 q13.13 109001 ChimerSeq ChiTaRs ChiTaRs ANO10-DBN1 ANO10 chr3 43663476 DBN1 chr5 176895870 Exonic hg19 NA DA734990 Out-of-frame Inter-chr p21.33 q35.3 109002 ChimerSeq ChiTaRs ChiTaRs MOG-TTYH2 MOG chr6 965631 TTYH2 chr17 72256502 Exonic hg19 NA DA071666 Out-of-frame Inter-chr q25.1 109003 ChimerSeq ChiTaRs ChiTaRs WWC3-PRR13 WWC3 chrX 10096145 PRR13 chr12 53837325 Exonic hg19 NA BQ650497 Out-of-frame Inter-chr p22.2 q13.13 109004 ChimerSeq ChiTaRs ChiTaRs BAI3-TUBGCP5 BAI3 chr6 69375137 TUBGCP5 chr15 22842143 Exonic hg19 NA DB046530 Out-of-frame Inter-chr q11.2 109005 ChimerSeq ChiTaRs ChiTaRs NCL-PSMG2 NCL chr2 232329189 PSMG2 chr18 12724568 Exonic hg19 NA BU941755 Out-of-frame Inter-chr q37.1 p11.21 109006 ChimerSeq ChiTaRs ChiTaRs PRAF2-AEBP1 PRAF2 chrX 48928962 AEBP1 chr7 44151200 Exonic hg19 NA CA436787 Out-of-frame Inter-chr p11.23 p13 Transcription factor 109007 ChimerSeq ChiTaRs ChiTaRs SPCS1-RPL4 SPCS1 chr3 52740253 RPL4 chr15 66793772 Exonic hg19 NA BU932269 Out-of-frame Inter-chr p21.1 q22.31 109008 ChimerSeq ChiTaRs ChiTaRs JUN-LARP4B JUN chr1 59248382 LARP4B chr10 856187 Exonic hg19 NA BM991652 Out-of-frame Inter-chr p32.1 Oncogene Transcription factor p15.3 109009 ChimerSeq ChiTaRs ChiTaRs HDAC6-STIM2 HDAC6 chrX 48673799 STIM2 chr4 27019424 Exonic hg19 NA AI366036 Out-of-frame Inter-chr p11.23 p15.2 109010 ChimerSeq ChiTaRs ChiTaRs IBTK-SRP54 IBTK chr6 82957446 SRP54 chr14 35465915 Exonic hg19 NA BU543439 Out-of-frame Inter-chr q13.2 109011 ChimerSeq ChiTaRs ChiTaRs ATXN1-GAPVD1 ATXN1 chr6 16761691 GAPVD1 chr9 128061167 Exonic hg19 NA DA221307 Out-of-frame Inter-chr p22.3 q33.3 109012 ChimerSeq ChiTaRs ChiTaRs NDUFAF4-CCDC47 NDUFAF4 chr6 97345741 CCDC47 chr17 61824146 Exonic hg19 NA CD356383 Out-of-frame Inter-chr q16.1 q23.3 109013 ChimerSeq ChiTaRs ChiTaRs GNB1-PEX2 GNB1 chr1 1717148 PEX2 chr8 77895820 Exonic hg19 NA EL955244 Out-of-frame Inter-chr p36.33 q21.13 109014 ChimerSeq ChiTaRs ChiTaRs MAT2A-UBE2O MAT2A chr2 85771514 UBE2O chr17 74387226 Exonic hg19 NA BG329301 Out-of-frame Inter-chr p11.2 Tumor suppressor gene q25.1 109015 ChimerSeq ChiTaRs ChiTaRs AURKAIP1-KAT6B AURKAIP1 chr1 1310593 KAT6B chr10 76791248 Exonic hg19 NA BF669247 Out-of-frame Inter-chr p36.33 Oncogene 109016 ChimerSeq ChiTaRs ChiTaRs PCDHB19P-H2AFY PCDHB19P chr5 140623430 H2AFY chr5 134681662 Exonic hg19 NA T05149 Out-of-frame Intra-chr q31.3 q31.1 109017 ChimerSeq ChiTaRs ChiTaRs UQCRH-CLTA UQCRH chr1 46769493 CLTA chr9 36211952 Exonic hg19 NA BU960348 Out-of-frame Inter-chr p33 p13.3 109018 ChimerSeq ChiTaRs ChiTaRs RMND5A-DDAH1 RMND5A chr2 87821032 DDAH1 chr1 85961849 Exonic hg19 NA CA438826 Out-of-frame Inter-chr p11.2 p22.3 109019 ChimerSeq ChiTaRs ChiTaRs SERPINB1-ERRFI1 SERPINB1 chr6 2833927 ERRFI1 chr1 8072043 Exonic hg19 NA BU620492 Out-of-frame Inter-chr p25.2 p36.23 Tumor suppressor gene 109020 ChimerSeq ChiTaRs ChiTaRs WBSCR22-ZYX WBSCR22 chr7 73101361 ZYX chr7 143087917 Exonic hg19 NA BQ188404 Out-of-frame Intra-chr q34 Tumor suppressor gene 109021 ChimerSeq ChiTaRs ChiTaRs SMARCA1-CNP SMARCA1 chrX 128652410 CNP chr17 40126540 Exonic hg19 NA AA719336 Out-of-frame Inter-chr q26.1 q21.2 109022 ChimerSeq ChiTaRs ChiTaRs NUP214-XKR3 NUP214 chr9 134074402 XKR3 chr22 17288733 Exonic hg19 NA BF211581 Out-of-frame Inter-chr q34.13 Oncogene q11.1 109023 ChimerSeq ChiTaRs ChiTaRs KIAA1429-THADA KIAA1429 chr8 95511674 THADA chr2 43489830 Exonic hg19 NA BE927708 Out-of-frame Inter-chr q22.1 p21 109024 ChimerSeq ChiTaRs ChiTaRs MTERF-ELOVL5 MTERF chr7 91503814 ELOVL5 chr6 53156675 Exonic hg19 NA DB155046 Out-of-frame Inter-chr p12.1 109025 ChimerSeq ChiTaRs ChiTaRs SPRR1B-XIST SPRR1B chr1 153004904 XIST chrX 73064471 Exonic hg19 NA AL706186 Out-of-frame Inter-chr q21.3 q13.2 Tumor suppressor gene 109026 ChimerSeq ChiTaRs ChiTaRs PERP-SLC2A1 PERP chr6 138428298 SLC2A1 chr1 43393319 Exonic hg19 NA AW856224 Out-of-frame Inter-chr q23.3 p34.2 109027 ChimerSeq ChiTaRs ChiTaRs AZIN1-TRIM46 AZIN1 chr8 103876392 TRIM46 chr1 155156687 Exonic hg19 NA DA493026 Out-of-frame Inter-chr q22.3 q22 109028 ChimerSeq ChiTaRs ChiTaRs SORBS1-MIAT SORBS1 chr10 97312963 MIAT chr22 27053575 Exonic hg19 NA DA247415 Out-of-frame Inter-chr q24.1 q12.1 109029 ChimerSeq ChiTaRs ChiTaRs CAPRIN1-ARHGAP17 CAPRIN1 chr11 34098172 ARHGAP17 chr16 24965923 Exonic hg19 NA BF932122 Out-of-frame Inter-chr p13 p12.1 109030 ChimerSeq ChiTaRs ChiTaRs EXOSC7-PRR4 EXOSC7 chr3 45043101 PRR4 chr12 10999777 Exonic hg19 NA CK430478 Out-of-frame Inter-chr p21.31 109031 ChimerSeq ChiTaRs ChiTaRs RBM8A-SOS1 RBM8A chr1 145508074 SOS1 chr2 39212826 Exonic hg19 NA DA211154 Out-of-frame Inter-chr q21.1 p22.1 109032 ChimerSeq ChiTaRs ChiTaRs HMGA1-MLH1 HMGA1 chr6 34213057 MLH1 chr3 37067174 Exonic hg19 NA BC005866 Out-of-frame Inter-chr p21.31 Transcription factor p22.2 Oncogene Tumor suppressor gene 109033 ChimerSeq ChiTaRs ChiTaRs KIF1B-DUSP1 KIF1B chr1 10359133 DUSP1 chr5 172197058 Exonic hg19 NA AA381300 Out-of-frame Inter-chr p36.22 Tumor suppressor gene q35.1 Tumor suppressor gene 109034 ChimerSeq ChiTaRs ChiTaRs AHR-CCDC144C AHR chr7 17384310 CCDC144C chr17 20268451 Exonic hg19 NA CD244895 Out-of-frame Inter-chr p21.1 Tumor suppressor gene Transcription factor 109035 ChimerSeq ChiTaRs ChiTaRs NBPF9-NBPF11 NBPF9 chr1 145039944 NBPF11 chr1 147917467 Exonic hg19 NA AB042558 Out-of-frame Intra-chr q21.2 q21.2 109036 ChimerSeq ChiTaRs ChiTaRs USP40-TUBG2 USP40 chr2 234421256 TUBG2 chr17 40811457 Exonic hg19 NA AK295569 Out-of-frame Inter-chr q37.1 q21.2 109037 ChimerSeq ChiTaRs ChiTaRs PRKDC-ACADVL PRKDC chr8 48744813 ACADVL chr17 7127688 Exonic hg19 NA BQ320900 Out-of-frame Inter-chr q11.21 Oncogene p13.1 109038 ChimerSeq ChiTaRs ChiTaRs FRMD3-MYH11 FRMD3 chr9 86094301 MYH11 chr16 15831423 Exonic hg19 NA AW835471 Out-of-frame Inter-chr q21.32 Oncogene 109039 ChimerSeq ChiTaRs ChiTaRs PDIA4-LOC440905 PDIA4 chr7 148701027 LOC440905 chr2 130786734 Exonic hg19 NA AW366734 Out-of-frame Inter-chr q36.1 109040 ChimerSeq ChiTaRs ChiTaRs RNF180-CASC2 RNF180 chr5 63621048 CASC2 chr10 119967000 Exonic hg19 NA BM718923 Out-of-frame Inter-chr q12.3 Tumor suppressor gene q26.11 Tumor suppressor gene 109041 ChimerSeq ChiTaRs ChiTaRs SYP-CYFIP2 SYP chrX 49045657 CYFIP2 chr5 156816341 Exonic hg19 NA AA317589 Out-of-frame Inter-chr p11.23 q33.3 109042 ChimerSeq ChiTaRs ChiTaRs GSN-CSNK1D GSN chr9 124064346 CSNK1D chr17 80210383 Exonic hg19 NA BE938381 Out-of-frame Inter-chr q33.2 Tumor suppressor gene q25.3 109043 ChimerSeq ChiTaRs ChiTaRs HDLBP-FAM174A HDLBP chr2 242196054 FAM174A chr5 99897759 Exonic hg19 NA BM833846 Out-of-frame Inter-chr q37.3 q21.1 109044 ChimerSeq ChiTaRs ChiTaRs PSMB7-EEF1D PSMB7 chr9 127119816 EEF1D chr8 144668389 Exonic hg19 NA BQ925563 Out-of-frame Inter-chr q33.3 109045 ChimerSeq ChiTaRs ChiTaRs SMEK2-PSME4 SMEK2 chr2 55844398 PSME4 chr2 54092472 Exonic hg19 NA BG430921 Out-of-frame Intra-chr p16.2 109046 ChimerSeq ChiTaRs ChiTaRs APOD-TCFL5 APOD chr3 195310850 TCFL5 chr20 61486396 Exonic hg19 NA DC323743 Out-of-frame Inter-chr q29 q13.33 Transcription factor 109047 ChimerSeq ChiTaRs ChiTaRs SCCPDH-TCF3 SCCPDH chr1 246930766 TCF3 chr19 1611788 Exonic hg19 NA AI018497 Out-of-frame Inter-chr q44 p13.3 Oncogene Tumor suppressor gene Transcription factor 109048 ChimerSeq ChiTaRs ChiTaRs SSRP1-TRMT2A SSRP1 chr11 57095201 TRMT2A chr22 20103854 Exonic hg19 NA BF509750 Out-of-frame Inter-chr q12.1 q11.21 109049 ChimerSeq ChiTaRs ChiTaRs ZMYND11-ZFAND4 ZMYND11 chr10 226068 ZFAND4 chr10 46135345 Exonic hg19 NA DB500938 In-Frame Intra-chr p15.3 Tumor suppressor gene q11.22 KB 109050 ChimerSeq ChiTaRs ChiTaRs CDK11B-NDUFA12 CDK11B chr1 1601517 NDUFA12 chr12 95365112 Exonic hg19 NA U34343 Out-of-frame Inter-chr p36.33 q22 109051 ChimerSeq ChiTaRs ChiTaRs CNTN4-B3GNT2 CNTN4 chr3 3079012 B3GNT2 chr2 62449613 Exonic hg19 NA AV724042 Out-of-frame Inter-chr p26.3 p15 109052 ChimerSeq ChiTaRs ChiTaRs KDM4C-MEIS1 KDM4C chr9 6793134 MEIS1 chr2 66794583 Exonic hg19 NA DA081548 Out-of-frame Inter-chr p24.1 p14 Transcription factor 109053 ChimerSeq ChiTaRs ChiTaRs TSPYL2-THBS1 TSPYL2 chrX 53111698 THBS1 chr15 39873356 Exonic hg19 NA BM547548 Out-of-frame Inter-chr p11.22 q14 Oncogene Tumor suppressor gene 109054 ChimerSeq ChiTaRs ChiTaRs TLN1-RBM27 TLN1 chr9 35697408 RBM27 chr5 145665927 Exonic hg19 NA BQ027059 Out-of-frame Inter-chr p13.3 q32 109055 ChimerSeq ChiTaRs ChiTaRs RHOA-CTNNB1 RHOA chr3 49449401 CTNNB1 chr3 41265510 Exonic hg19 NA DA715882 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene p22.1 Oncogene 109056 ChimerSeq ChiTaRs ChiTaRs MEST-ATP6V0A1 MEST chr7 130138000 ATP6V0A1 chr17 40673059 Exonic hg19 NA DA696958 Out-of-frame Inter-chr q32.2 q21.2 109057 ChimerSeq ChiTaRs ChiTaRs CCND3-LARP4B CCND3 chr6 42016414 LARP4B chr10 858314 Exonic hg19 NA AK292946 Out-of-frame Inter-chr p21.1 p15.3 109058 ChimerSeq ChiTaRs ChiTaRs DHFR-TM9SF3 DHFR chr5 79947664 TM9SF3 chr10 98321775 Exonic hg19 NA DB727835 Out-of-frame Inter-chr q14.1 q24.1 109059 ChimerSeq ChiTaRs ChiTaRs PDCD4-PMS2P5 PDCD4 chr10 112647502 PMS2P5 chr7 74321683 Exonic hg19 NA BE179153 Out-of-frame Inter-chr q25.2 Tumor suppressor gene q11.23 109060 ChimerSeq ChiTaRs ChiTaRs LAMB1-CHMP5 LAMB1 chr7 107569588 CHMP5 chr9 33281302 Exonic hg19 NA BX475550 Out-of-frame Inter-chr q31.1 p13.3 109061 ChimerSeq ChiTaRs ChiTaRs ANGPT1-HIP1 ANGPT1 chr8 108348501 HIP1 chr7 75190630 Exonic hg19 NA AW119175 Out-of-frame Inter-chr q23.1 q11.23 109062 ChimerSeq ChiTaRs ChiTaRs TRAK2-CD68 TRAK2 chr2 202242382 CD68 chr17 7482958 Exonic hg19 NA BP304224 Out-of-frame Inter-chr q33.1 p13.1 109063 ChimerSeq ChiTaRs ChiTaRs CCDC66-NDUFB5 CCDC66 chr3 56605331 NDUFB5 chr3 179341707 Exonic hg19 NA AA406390 5'UTR-CDS Intra-chr p14.3 q26.33 109064 ChimerSeq ChiTaRs ChiTaRs PRRX1-PGRMC2 PRRX1 chr1 170708541 PGRMC2 chr4 129192113 Exonic hg19 NA AI394219 3'UTR-3'UTR Inter-chr q24.2 Transcription factor q28.2 Tumor suppressor gene 109065 ChimerSeq ChiTaRs ChiTaRs JUN-MPV17 JUN chr1 59249152 MPV17 chr2 27532377 Exonic hg19 NA CR981234 Out-of-frame Inter-chr p32.1 Oncogene Transcription factor p23.3 109066 ChimerSeq ChiTaRs ChiTaRs FAM107B-MXI1 FAM107B chr10 14613998 MXI1 chr10 111987945 Exonic hg19 NA DB176204 Out-of-frame Intra-chr p13 q25.2 Tumor suppressor gene Transcription factor 109067 ChimerSeq ChiTaRs ChiTaRs HMGA1-RPL18 HMGA1 chr6 34214008 RPL18 chr19 49118588 Exonic hg19 NA BC051359 3'UTR-3'UTR Inter-chr p21.31 Transcription factor q13.33 109068 ChimerSeq ChiTaRs ChiTaRs OSBPL5-TECR OSBPL5 chr11 3151790 TECR chr19 14676568 Exonic hg19 NA AA329184 Out-of-frame Inter-chr p15.4 p13.12 109069 ChimerSeq ChiTaRs ChiTaRs MEA1-S100A6 MEA1 chr6 42974711 S100A6 chr1 153507075 Exonic hg19 NA BM471847 3'UTR-3'UTR Inter-chr p21.1 q21.3 109070 ChimerSeq ChiTaRs ChiTaRs SNHG1-EEF1A1 SNHG1 chr11 62620858 EEF1A1 chr6 74228847 Exonic hg19 NA DA514269 Out-of-frame Inter-chr q12.3 q13 Tumor suppressor gene 109071 ChimerSeq ChiTaRs ChiTaRs COQ10B-KIF3A COQ10B chr2 198339134 KIF3A chr5 132029204 Exonic hg19 NA AK308977 Out-of-frame Inter-chr q33.1 q31.1 109072 ChimerSeq ChiTaRs ChiTaRs MLF1-CIZ1 MLF1 chr3 158323186 CIZ1 chr9 130942714 Exonic hg19 NA CA423309 Out-of-frame Inter-chr q25.32 q34.11 Tumor suppressor gene 109073 ChimerSeq ChiTaRs ChiTaRs NANS-LRRC41 NANS chr9 100845359 LRRC41 chr1 46746954 Exonic hg19 NA AA421701 Out-of-frame Inter-chr q22.33 p33 109074 ChimerSeq ChiTaRs ChiTaRs KPNA6-SUGP2 KPNA6 chr1 32573737 SUGP2 chr19 19119125 Exonic hg19 NA CB961425 Out-of-frame Inter-chr p35.2 p13.11 109075 ChimerSeq ChiTaRs ChiTaRs ATP13A2-CLDND1 ATP13A2 chr1 17323791 CLDND1 chr3 98235698 Exonic hg19 NA AW962238 Out-of-frame Inter-chr p36.13 q11.2 109076 ChimerSeq ChiTaRs ChiTaRs BRDT-LANCL2 BRDT chr1 92433748 LANCL2 chr7 55459489 Exonic hg19 NA BI520125 Out-of-frame Inter-chr p22.1 Atypical:BRD p11.2 109077 ChimerSeq ChiTaRs ChiTaRs CD109-NPHP1 CD109 chr6 74440297 NPHP1 chr2 110919178 Exonic hg19 NA W33075 Out-of-frame Inter-chr q13 q13 109078 ChimerSeq ChiTaRs ChiTaRs TPP1-PRKAR1A TPP1 chr11 6635458 PRKAR1A chr17 66527556 Exonic hg19 NA AV751006 Out-of-frame Inter-chr p15.4 q24.2 Oncogene Tumor suppressor gene 109079 ChimerSeq ChiTaRs ChiTaRs MATR3-PRKCH MATR3 chr5 138648360 PRKCH chr14 61782416 Exonic hg19 NA CV382561 Out-of-frame Inter-chr q31.2 q23.1 109080 ChimerSeq ChiTaRs ChiTaRs C9orf96-SIDT2 C9orf96 chr9 136271500 SIDT2 chr11 117067265 Exonic hg19 NA BM874040 Out-of-frame Inter-chr q23.3 109081 ChimerSeq ChiTaRs ChiTaRs CCNB1-ULK4 CCNB1 chr5 68467260 ULK4 chr3 41357890 Exonic hg19 NA BI042340 Out-of-frame Inter-chr q13.2 p22.1 Other:ULK 109082 ChimerSeq ChiTaRs ChiTaRs RRP15-HYOU1 RRP15 chr1 218475901 HYOU1 chr11 118922856 Exonic hg19 NA BP245517 In-Frame Inter-chr q41 109083 ChimerSeq ChiTaRs ChiTaRs NET1-ATRN NET1 chr10 5494380 ATRN chr20 3629507 Exonic hg19 NA AA452049 Out-of-frame Inter-chr p15.1 p13 109084 ChimerSeq ChiTaRs ChiTaRs NUDT10-TTC37 NUDT10 chrX 51079353 TTC37 chr5 94877007 Exonic hg19 NA AU125362 Out-of-frame Inter-chr p11.22 q15 109085 ChimerSeq ChiTaRs ChiTaRs DARS2-C20orf27 DARS2 chr1 173827030 C20orf27 chr20 3734156 Exonic hg19 NA AK022713 Out-of-frame Inter-chr q25.1 p13 109086 ChimerSeq ChiTaRs ChiTaRs SPTAN1-MEST SPTAN1 chr9 131353900 MEST chr7 130145187 Exonic hg19 NA AA368620 Out-of-frame Inter-chr q34.11 q32.2 109087 ChimerSeq ChiTaRs ChiTaRs CLDN4-MUC4 CLDN4 chr7 73245980 MUC4 chr3 195516287 Exonic hg19 NA BG984966 Out-of-frame Inter-chr q11.23 109088 ChimerSeq ChiTaRs ChiTaRs PRRC2B-CSH1 PRRC2B chr9 134375543 CSH1 chr17 61972832 Exonic hg19 NA AA368572 3'UTR-CDS Inter-chr q34.13 q23.3 109089 ChimerSeq ChiTaRs ChiTaRs SYT11-HMGB1 SYT11 chr1 155854061 HMGB1 chr13 31108774 Exonic hg19 NA D38522 Out-of-frame Inter-chr q22 q12.3 109090 ChimerSeq ChiTaRs ChiTaRs UGT3A2-HBB UGT3A2 chr5 36035897 HBB chr11 5246826 Exonic hg19 NA BE843851 Out-of-frame Inter-chr p13.2 p15.4 109091 ChimerSeq ChiTaRs ChiTaRs PGM1-CPSF2 PGM1 chr1 64125974 CPSF2 chr14 92628923 Exonic hg19 NA AI830657 Out-of-frame Inter-chr p31.3 q32.12 109092 ChimerSeq ChiTaRs ChiTaRs ARHGAP15-MBNL1 ARHGAP15 chr2 144008170 MBNL1 chr3 152132728 Exonic hg19 NA AL832395 Out-of-frame Inter-chr q22.2 q25.1 109093 ChimerSeq ChiTaRs ChiTaRs CLCN4-APP CLCN4 chrX 10166101 APP chr21 27253294 Exonic hg19 NA AV728963 CDS-3'UTR Inter-chr p22.2 q21.3 109094 ChimerSeq ChiTaRs ChiTaRs CAP1-CNTROB CAP1 chr1 40537922 CNTROB chr17 7835583 Exonic hg19 NA BE504885 Out-of-frame Inter-chr p34.2 p13.1 109095 ChimerSeq ChiTaRs ChiTaRs SNHG6-CPE SNHG6 chr8 67834786 CPE chr4 166300231 Exonic hg19 NA DC314895 Out-of-frame Inter-chr q13.1 q32.3 109096 ChimerSeq ChiTaRs ChiTaRs HLA-C-HSP90AA1 HLA-C chr6 2751447 HSP90AA1 chr14 102551655 Exonic hg19 NA CK003121 Out-of-frame Inter-chr q32.31 109097 ChimerSeq ChiTaRs ChiTaRs STAG3-HNF4G STAG3 chr7 99820284 HNF4G chr8 76355455 Exonic hg19 NA BF512011 Out-of-frame Inter-chr q22.1 q21.13 Transcription factor 109098 ChimerSeq ChiTaRs ChiTaRs TMEM138-DTNB TMEM138 chr11 61133688 DTNB chr2 25678322 Exonic hg19 NA BQ057316 Out-of-frame Inter-chr q12.2 p23.3 109099 ChimerSeq ChiTaRs ChiTaRs TRA2A-CENPO TRA2A chr7 23571569 CENPO chr2 25022544 Exonic hg19 NA BQ214674 Out-of-frame Inter-chr p15.3 p23.3 109100 ChimerSeq ChiTaRs ChiTaRs UTP3-SQSTM1 UTP3 chr4 71554448 SQSTM1 chr5 179248080 Exonic hg19 NA BP276289 Out-of-frame Inter-chr q13.3 q35.3 109101 ChimerSeq ChiTaRs ChiTaRs HLA-B-CYTH2 HLA-B chr6 31322909 CYTH2 chr19 48984538 Exonic hg19 NA AW843252 Out-of-frame Inter-chr q13.33 109102 ChimerSeq ChiTaRs ChiTaRs NUCB2-IMPA2 NUCB2 chr11 17304451 IMPA2 chr18 12028045 Exonic hg19 NA BP429539 Out-of-frame Inter-chr p15.1 p11.21 109103 ChimerSeq ChiTaRs ChiTaRs C1QC-MYO1F C1QC chr1 22974599 MYO1F chr19 8617015 Exonic hg19 NA CD370183 Out-of-frame Inter-chr p36.12 p13.2 109104 ChimerSeq ChiTaRs ChiTaRs RALA-TRIM58 RALA chr7 39663426 TRIM58 chr1 248023916 Exonic hg19 NA AL080170 Out-of-frame Inter-chr p14.1 q44 109105 ChimerSeq ChiTaRs ChiTaRs SNHG1-ACTB SNHG1 chr11 62621200 ACTB chr7 5568300 Exonic hg19 NA DB103450 Out-of-frame Inter-chr q12.3 p22.1 109106 ChimerSeq ChiTaRs ChiTaRs PDCD10-ARHGAP15 PDCD10 chr3 167452645 ARHGAP15 chr2 143986148 Exonic hg19 NA AV760860 Out-of-frame Inter-chr q26.1 q22.2 109107 ChimerSeq ChiTaRs ChiTaRs CACNA2D3-MIR632 CACNA2D3 chr3 54366747 MIR632 chr17 30677184 Exonic hg19 NA DB262757 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q11.2 109108 ChimerSeq ChiTaRs ChiTaRs UNC50-UBA6 UNC50 chr2 99226393 UBA6 chr4 68536246 Exonic hg19 NA BP365839 Out-of-frame Inter-chr q11.2 q13.2 109109 ChimerSeq ChiTaRs ChiTaRs DEGS1-SERINC1 DEGS1 chr1 224377924 SERINC1 chr6 122765667 Exonic hg19 NA BG249152 Out-of-frame Inter-chr q42.11 q22.31 109110 ChimerSeq ChiTaRs ChiTaRs LRRC8C-GHR LRRC8C chr1 90172987 GHR chr5 42720795 Exonic hg19 NA AI038022 Out-of-frame Inter-chr p22.2 p13.1 109111 ChimerSeq ChiTaRs ChiTaRs ZEB1-SIK1 ZEB1 chr10 31816308 SIK1 chr21 44834401 Exonic hg19 NA D15050 Out-of-frame Inter-chr p11.22 Transcription factor q22.3 Tumor suppressor gene 109112 ChimerSeq ChiTaRs ChiTaRs MAN1A2-GYPC MAN1A2 chr1 117963272 GYPC chr2 127452947 Exonic hg19 NA AA730065 Out-of-frame Inter-chr p12 q14.3 109113 ChimerSeq ChiTaRs ChiTaRs LEFTY1-TNNI1 LEFTY1 chr1 226107972 TNNI1 chr1 201378010 Exonic hg19 NA AJ572531 Out-of-frame Intra-chr q42.12 Tumor suppressor gene q32.1 109114 ChimerSeq ChiTaRs ChiTaRs MIR548N-FUNDC2 MIR548N chr2 179451934 FUNDC2 chrX 154279966 Exonic hg19 NA AK129832 Out-of-frame Inter-chr p14.2 q28 109115 ChimerSeq ChiTaRs ChiTaRs MLLT11-ENC1 MLLT11 chr1 151040068 ENC1 chr5 73925334 Exonic hg19 NA DA770041 Out-of-frame Inter-chr q21.3 q13.3 109116 ChimerSeq ChiTaRs ChiTaRs WASL-RALBP1 WASL chr7 123323877 RALBP1 chr18 9516972 Exonic hg19 NA CD522431 Out-of-frame Inter-chr q31.32 p11.22 109117 ChimerSeq ChiTaRs ChiTaRs DTX2-NUB1 DTX2 chr7 76091153 NUB1 chr7 151072933 Exonic hg19 NA BI909126 5'UTR-CDS Intra-chr q36.1 109118 ChimerSeq ChiTaRs ChiTaRs NINJ1-LOC100499227 NINJ1 chr9 95884101 LOC100499227 chr11 119290781 Exonic hg19 NA AI042553 Out-of-frame Inter-chr q22.31 Tumor suppressor gene 109119 ChimerSeq ChiTaRs ChiTaRs PDLIM5-MIR548F1 PDLIM5 chr4 95539258 MIR548F1 chr1 186412714 Exonic hg19 NA AF076463 Out-of-frame Inter-chr q22.3 q21.1 109120 ChimerSeq ChiTaRs ChiTaRs EIF4G1-TPM2 EIF4G1 chr3 184040401 TPM2 chr9 35685725 Exonic hg19 NA AW859462 Out-of-frame Inter-chr q27.1 p13.3 109121 ChimerSeq ChiTaRs ChiTaRs DHFR-PSMD2 DHFR chr5 79947424 PSMD2 chr3 184019408 Exonic hg19 NA DA541950 Out-of-frame Inter-chr q14.1 q27.1 109122 ChimerSeq ChiTaRs ChiTaRs SGOL1-CERK SGOL1 chr3 20219842 CERK chr22 47080307 Exonic hg19 NA BX384993 Out-of-frame Inter-chr q13.31 109123 ChimerSeq ChiTaRs ChiTaRs ESYT2-ENO1 ESYT2 chr7 158524736 ENO1 chr1 8938643 Exonic hg19 NA BQ940416 Out-of-frame Inter-chr q36.3 p36.23 109124 ChimerSeq ChiTaRs ChiTaRs SMA4-NMNAT1 SMA4 chr5 70237320 NMNAT1 chr1 10044392 Exonic hg19 NA BJ997860 Out-of-frame Inter-chr p36.22 109125 ChimerSeq ChiTaRs ChiTaRs ZNF786-PRKAG2 ZNF786 chr7 148787785 PRKAG2 chr7 151292454 Exonic hg19 NA DB487487 Out-of-frame Intra-chr q36.1 Transcription factor q36.1 109126 ChimerSeq ChiTaRs ChiTaRs LEPROT-IPO9 LEPROT chr1 65886423 IPO9 chr1 201838716 Exonic hg19 NA DA753120 5'UTR-CDS Intra-chr p31.3 q32.1 109127 ChimerSeq ChiTaRs ChiTaRs KIAA2018-TAX1BP3 KIAA2018 chr3 113404606 TAX1BP3 chr17 3567538 Exonic hg19 NA T06887 Out-of-frame Inter-chr p13.2 109128 ChimerSeq ChiTaRs ChiTaRs SETX-INADL SETX chr9 135191196 INADL chr1 62257089 Exonic hg19 NA BQ330674 Out-of-frame Inter-chr q34.13 109129 ChimerSeq ChiTaRs ChiTaRs GNAQ-DYNC1I2 GNAQ chr9 80333757 DYNC1I2 chr2 172571855 Exonic hg19 NA DA490542 Out-of-frame Inter-chr q21.2 Oncogene q31.1 109130 ChimerSeq ChiTaRs ChiTaRs CCT3-RAC1 CCT3 chr1 156288685 RAC1 chr7 6442050 Exonic hg19 NA CB114948 Out-of-frame Inter-chr q22 p22.1 Oncogene 109131 ChimerSeq ChiTaRs ChiTaRs TMSB4X-TSPAN7 TMSB4X chrX 12995042 TSPAN7 chrX 38420797 Exonic hg19 NA DA286674 Out-of-frame Intra-chr p22.2 p11.4 109132 ChimerSeq ChiTaRs ChiTaRs SNHG6-NQO1 SNHG6 chr8 67834783 NQO1 chr16 69748934 Exonic hg19 NA DA648735 Out-of-frame Inter-chr q13.1 q22.1 109133 ChimerSeq ChiTaRs ChiTaRs HFM1-HGF HFM1 chr1 91853065 HGF chr7 81392091 Exonic hg19 NA AV707491 Out-of-frame Inter-chr p22.2 q21.11 Oncogene 109134 ChimerSeq ChiTaRs ChiTaRs PPP2R2A-PCMTD1 PPP2R2A chr8 26151258 PCMTD1 chr8 52744004 Exonic hg19 NA CF994096 Out-of-frame Intra-chr p21.2 q11.23 109135 ChimerSeq ChiTaRs ChiTaRs TNRC18-HMGN3 TNRC18 chr7 5410103 HMGN3 chr6 79911942 Exonic hg19 NA BE925578 Out-of-frame Inter-chr p22.1 q14.1 Transcription factor 109136 ChimerSeq ChiTaRs ChiTaRs PHYHIP-OSER1 PHYHIP chr8 22085206 OSER1 chr20 42825552 Exonic hg19 NA BC013692 Out-of-frame Inter-chr p21.3 q13.12 109137 ChimerSeq ChiTaRs ChiTaRs LARP1-HIRA LARP1 chr5 154196201 HIRA chr22 19338670 Exonic hg19 NA BF841958 Out-of-frame Inter-chr q33.2 q11.21 Tumor suppressor gene 109138 ChimerSeq ChiTaRs ChiTaRs THOC3-RCBTB2 THOC3 chr5 175386686 RCBTB2 chr13 49066813 Exonic hg19 NA BF445411 Out-of-frame Inter-chr q35.2 q14.2 109139 ChimerSeq ChiTaRs ChiTaRs CCDC132-MATR3 CCDC132 chr7 92869248 MATR3 chr5 138650362 Exonic hg19 NA DA012929 Out-of-frame Inter-chr q31.2 109140 ChimerSeq ChiTaRs ChiTaRs SRSF11-ARHGAP11A SRSF11 chr1 70716144 ARHGAP11A chr15 32908243 Exonic hg19 NA AW949228 Out-of-frame Inter-chr p31.1 109141 ChimerSeq ChiTaRs ChiTaRs ATP6V0E2-KIF5A ATP6V0E2 chr7 149577783 KIF5A chr12 57962836 Exonic hg19 NA AA976981 Out-of-frame Inter-chr q36.1 q13.3 109142 ChimerSeq ChiTaRs ChiTaRs RGPD5-MBP RGPD5 chr2 113191191 MBP chr18 74692358 Exonic hg19 NA DA172694 Out-of-frame Inter-chr q13 q23 109143 ChimerSeq ChiTaRs ChiTaRs MSH5-AIF1 MSH5 chr6 3004591 AIF1 chr6 2914927 Exonic hg19 NA BM761792 Out-of-frame Intra-chr Tumor suppressor gene 109144 ChimerSeq ChiTaRs ChiTaRs MICB-PCDH11Y MICB chr6 2586754 PCDH11Y chrY 5206720 Exonic hg19 NA BM785679 Out-of-frame Inter-chr p11.2 109145 ChimerSeq ChiTaRs ChiTaRs FAF1-RCAN2 FAF1 chr1 50923312 RCAN2 chr6 46314918 Exonic hg19 NA BF954283 Out-of-frame Inter-chr p32.3 p12.3 109146 ChimerSeq ChiTaRs ChiTaRs SAA2-SAA4-BCL6 SAA2-SAA4 chr11 18270181 BCL6 chr3 187456013 Exonic hg19 NA BC070312 Out-of-frame Inter-chr p15.1 Tumor suppressor gene q27.3 109147 ChimerSeq ChiTaRs ChiTaRs ENC1-LRBA ENC1 chr5 73936265 LRBA chr4 151186410 Exonic hg19 NA BE873019 Out-of-frame Inter-chr q13.3 q31.3 109148 ChimerSeq ChiTaRs ChiTaRs LDB2-TAX1BP1 LDB2 chr4 16900251 TAX1BP1 chr7 27867355 Exonic hg19 NA BM920574 Out-of-frame Inter-chr p15.32 p15.2 109149 ChimerSeq ChiTaRs ChiTaRs ANAPC4-RTN4 ANAPC4 chr4 25420351 RTN4 chr2 55209717 Exonic hg19 NA W68688 Out-of-frame Inter-chr p15.2 p16.1 Tumor suppressor gene 109150 ChimerSeq ChiTaRs ChiTaRs LRBA-LRBA LRBA chr4 151816471 LRBA chr4 151762030 Exonic hg19 NA AW991969 Out-of-frame Intra-chr q31.3 q31.3 109151 ChimerSeq ChiTaRs ChiTaRs PUM1-NLRC5 PUM1 chr1 31448407 NLRC5 chr16 57063738 Exonic hg19 NA DB332141 Out-of-frame Inter-chr p35.2 q13 109152 ChimerSeq ChiTaRs ChiTaRs ACTB-RPS16 ACTB chr7 5570222 RPS16 chr19 39923982 Exonic hg19 NA BG473536 Out-of-frame Inter-chr p22.1 q13.2 109153 ChimerSeq ChiTaRs ChiTaRs TARBP1-DAB2IP TARBP1 chr1 234534297 DAB2IP chr9 124538502 Exonic hg19 NA BQ720946 Out-of-frame Inter-chr q42.2 q33.2 Tumor suppressor gene 109154 ChimerSeq ChiTaRs ChiTaRs RHBDL2-NXN RHBDL2 chr1 39384855 NXN chr17 702585 Exonic hg19 NA AK000442 Out-of-frame Inter-chr p34.3 p13.3 109155 ChimerSeq ChiTaRs ChiTaRs ZMAT2-PVALB ZMAT2 chr5 140085783 PVALB chr22 37196811 Exonic hg19 NA BE149780 Out-of-frame Inter-chr q31.3 109156 ChimerSeq ChiTaRs ChiTaRs NLGN4X-RPS23 NLGN4X chrX 6143763 RPS23 chr5 81571879 Exonic hg19 NA AI889745 Out-of-frame Inter-chr p22.31 q14.2 109157 ChimerSeq ChiTaRs ChiTaRs NXF1-ZNF609 NXF1 chr11 62559859 ZNF609 chr15 64968117 Exonic hg19 NA AW197217 Out-of-frame Inter-chr q12.3 q22.31 Transcription factor 109158 ChimerSeq ChiTaRs ChiTaRs FGA-NEU1 FGA chr4 155507818 NEU1 chr6 3159999 Exonic hg19 NA AA345305 Out-of-frame Inter-chr q31.3 109159 ChimerSeq ChiTaRs ChiTaRs TSIX-TOMM40L TSIX chrX 73042110 TOMM40L chr1 161199459 Exonic hg19 NA Z30425 Out-of-frame Inter-chr q13.2 q23.3 109160 ChimerSeq ChiTaRs ChiTaRs RMRP-HSPB1 RMRP chr9 35658003 HSPB1 chr7 75932236 Exonic hg19 NA N36356 Out-of-frame Inter-chr p13.3 q11.23 109161 ChimerSeq ChiTaRs ChiTaRs GPM6A-POLR2A GPM6A chr4 176733415 POLR2A chr17 7404138 Exonic hg19 NA DA107051 Out-of-frame Inter-chr q34.2 p13.1 109162 ChimerSeq ChiTaRs ChiTaRs ADCY2-KCTD15 ADCY2 chr1 152006274 KCTD15 chr19 34291354 Exonic hg19 NA CN301511 Out-of-frame Inter-chr p15.31 q13.11 109163 ChimerSeq ChiTaRs ChiTaRs LOC100506963-PHC2 LOC100506963 chr1 24104779 PHC2 chr1 33841056 Exonic hg19 NA BX503789 Out-of-frame Intra-chr p35.1 109164 ChimerSeq ChiTaRs ChiTaRs CSNK1A1-TUBB2A CSNK1A1 chr5 148930724 TUBB2A chr6 3153902 Exonic hg19 NA BF525947 Out-of-frame Inter-chr q32 Tumor suppressor gene p25.2 109165 ChimerSeq ChiTaRs ChiTaRs FAM105A-DHCR24 FAM105A chr5 14610569 DHCR24 chr1 55317014 Exonic hg19 NA DA046822 Out-of-frame Inter-chr p15.2 p32.3 109166 ChimerSeq ChiTaRs ChiTaRs RAB11FIP2-HMGXB4 RAB11FIP2 chr10 119774621 HMGXB4 chr22 35684241 Exonic hg19 NA CN478913 Out-of-frame Inter-chr q26.11 q12.3 109167 ChimerSeq ChiTaRs ChiTaRs SEC31A-PTEN SEC31A chr4 83812291 PTEN chr10 89725042 Exonic hg19 NA BI823499 Out-of-frame Inter-chr q21.22 q23.31 Oncogene Tumor suppressor gene 109168 ChimerSeq ChiTaRs ChiTaRs ARHGAP21-ZGPAT ARHGAP21 chr10 24880208 ZGPAT chr20 62366635 Exonic hg19 NA BI046659 Out-of-frame Inter-chr p12.1 q13.33 Transcription factor 109169 ChimerSeq ChiTaRs ChiTaRs RBM3-ILK RBM3 chrX 48434003 ILK chr11 6630374 Exonic hg19 NA AA329557 Out-of-frame Inter-chr p11.23 p15.4 TKL:MLK Tumor suppressor gene 109170 ChimerSeq ChiTaRs ChiTaRs HFM1-CLINT1 HFM1 chr1 91853059 CLINT1 chr5 157218829 Exonic hg19 NA AV749664 Out-of-frame Inter-chr p22.2 q33.3 109171 ChimerSeq ChiTaRs ChiTaRs H19-NCEH1 H19 chr11 2018981 NCEH1 chr3 172361111 Exonic hg19 NA AF074689 Out-of-frame Inter-chr p15.5 Tumor suppressor gene q26.31 109172 ChimerSeq ChiTaRs ChiTaRs GPX1-SLC35B3 GPX1 chr3 49394752 SLC35B3 chr6 8435434 Exonic hg19 NA AA995621 Out-of-frame Inter-chr p21.31 p24.3 109173 ChimerSeq ChiTaRs ChiTaRs EPHB4-RPS4X EPHB4 chr7 100410486 RPS4X chrX 71492453 Exonic hg19 NA BG151410 Out-of-frame Inter-chr q22.1 Oncogene Tumor suppressor gene q13.1 109174 ChimerSeq ChiTaRs ChiTaRs ATP7A-PGAM1 ATP7A chrX 77223697 PGAM1 chr10 99192262 Exonic hg19 NA CN393630 Out-of-frame Inter-chr q21.1 q24.1 109175 ChimerSeq ChiTaRs ChiTaRs ARPC4-RNF144A ARPC4 chr3 9845586 RNF144A chr2 7183862 Exonic hg19 NA DA770894 Out-of-frame Inter-chr p25.3 p25.1 Tumor suppressor gene 109176 ChimerSeq ChiTaRs ChiTaRs PHC2-C9orf78 PHC2 chr1 33848235 C9orf78 chr9 132594181 Exonic hg19 NA BF854186 Out-of-frame Inter-chr p35.1 q34.11 109177 ChimerSeq ChiTaRs ChiTaRs RNF13-LIMCH1 RNF13 chr3 149589944 LIMCH1 chr4 41652408 Exonic hg19 NA DA317546 Out-of-frame Inter-chr q25.1 p13 109178 ChimerSeq ChiTaRs ChiTaRs MECP2-HCFC1R1 MECP2 chrX 153290145 HCFC1R1 chr16 3073235 Exonic hg19 NA BQ877133 Out-of-frame Inter-chr q28 Transcription factor p13.3 109179 ChimerSeq ChiTaRs ChiTaRs YTHDC1-INS-IGF2 YTHDC1 chr4 10538 INS-IGF2 chr11 2154318 Exonic hg19 NA H54543 Out-of-frame Inter-chr p15.5 109180 ChimerSeq ChiTaRs ChiTaRs MRPL15-MRPS22 MRPL15 chr8 55060452 MRPS22 chr3 139069829 Exonic hg19 NA BM465902 Out-of-frame Inter-chr q11.23 q23 109181 ChimerSeq ChiTaRs ChiTaRs TMEM138-DTNB TMEM138 chr11 61133688 DTNB chr2 25656787 Exonic hg19 NA BQ056742 In-Frame Inter-chr q12.2 p23.3 109182 ChimerSeq ChiTaRs ChiTaRs LUZP1-GNB1 LUZP1 chr1 23495310 GNB1 chr1 1735877 Exonic hg19 NA DA668677 Out-of-frame Intra-chr p36.12 p36.33 109183 ChimerSeq ChiTaRs ChiTaRs KAT6B-NRD1 KAT6B chr10 76735476 NRD1 chr1 52269556 Exonic hg19 NA AU124950 Out-of-frame Inter-chr Oncogene 109184 ChimerSeq ChiTaRs ChiTaRs PCMTD1-DCDC2 PCMTD1 chr8 52811574 DCDC2 chr6 24357394 Exonic hg19 NA BC014954 Out-of-frame Inter-chr q11.23 p22.3 Tumor suppressor gene 109185 ChimerSeq ChiTaRs ChiTaRs SRRM1-MED12L SRRM1 chr1 24973218 MED12L chr3 151055754 Exonic hg19 NA D81412 Out-of-frame Inter-chr p36.11 q25.1 109186 ChimerSeq ChiTaRs ChiTaRs RALGPS2-SLC22A17 RALGPS2 chr1 178885580 SLC22A17 chr14 23815533 Exonic hg19 NA BX112360 Out-of-frame Inter-chr q25.2 q11.2 109187 ChimerSeq ChiTaRs ChiTaRs ADK-LSAMP ADK chr10 76158276 LSAMP chr3 115918507 Exonic hg19 NA BE699173 Out-of-frame Inter-chr q22.2 q13.31 Tumor suppressor gene 109188 ChimerSeq ChiTaRs ChiTaRs TG-USP19 TG chr8 134087166 USP19 chr3 49146115 Exonic hg19 NA CR986635 Out-of-frame Inter-chr q24.22 p21.31 109189 ChimerSeq ChiTaRs ChiTaRs SEC61G-ZNF446 SEC61G chr7 54823514 ZNF446 chr19 58991482 Exonic hg19 NA W28426 Out-of-frame Inter-chr p11.2 q13.43 Transcription factor 109190 ChimerSeq ChiTaRs ChiTaRs PSPH-GPATCH1 PSPH chr7 56148358 GPATCH1 chr19 33600870 Exonic hg19 NA CA430683 Out-of-frame Inter-chr p11.2 q13.11 109191 ChimerSeq ChiTaRs ChiTaRs ATL2-NDRG2 ATL2 chr2 38523092 NDRG2 chr14 21490242 Exonic hg19 NA DB179338 Out-of-frame Inter-chr p22.1 q11.2 Tumor suppressor gene 109192 ChimerSeq ChiTaRs ChiTaRs HSPB1-FARP2 HSPB1 chr7 75933605 FARP2 chr2 242382597 Exonic hg19 NA AI470274 Out-of-frame Inter-chr q11.23 q37.3 109193 ChimerSeq ChiTaRs ChiTaRs MIR548N-FAH MIR548N chr2 179315370 FAH chr15 80460620 Exonic hg19 NA BU955820 Out-of-frame Inter-chr p14.2 q25.1 109194 ChimerSeq ChiTaRs ChiTaRs BZW1-CLPTM1L BZW1 chr2 201683603 CLPTM1L chr5 1326523 Exonic hg19 NA BF990040 Out-of-frame Inter-chr q33.1 p15.33 109195 ChimerSeq ChiTaRs ChiTaRs RAB5A-PRKAB2 RAB5A chr3 19988773 PRKAB2 chr1 146628365 Exonic hg19 NA DA947002 Out-of-frame Inter-chr p24.3 q21.1 109196 ChimerSeq ChiTaRs ChiTaRs COMMD5-SEPT8 COMMD5 chr8 146078404 2008_ 9_ 1_ chr5 132091697 Exonic hg19 NA BU566385 Out-of-frame Inter-chr q24.3 109197 ChimerSeq ChiTaRs ChiTaRs RBPJ-GLB1 RBPJ chr4 26435359 GLB1 chr3 33065743 Exonic hg19 NA AU125113 Out-of-frame Inter-chr p15.2 Transcription factor p22.3 109198 ChimerSeq ChiTaRs ChiTaRs TINAGL1-TACC2 TINAGL1 chr1 32053287 TACC2 chr10 123970677 Exonic hg19 NA CK821400 3'UTR-CDS Inter-chr p35.2 q26.13 109199 ChimerSeq ChiTaRs ChiTaRs S100A4-SDCBP2 S100A4 chr1 153518296 SDCBP2 chr20 1352720 Exonic hg19 NA CB118649 Out-of-frame Inter-chr q21.3 p13 109200 ChimerSeq ChiTaRs ChiTaRs GJA4-ACOX1 GJA4 chr1 35260326 ACOX1 chr17 73945433 Exonic hg19 NA AK310985 Out-of-frame Inter-chr p34.3 q25.1 109201 ChimerSeq ChiTaRs ChiTaRs GLS-PEBP1 GLS chr2 191760395 PEBP1 chr12 118582465 Exonic hg19 NA BI481206 Out-of-frame Inter-chr q32.2 Tumor suppressor gene q24.23 Tumor suppressor gene 109202 ChimerSeq ChiTaRs ChiTaRs AMPD1-FYTTD1 AMPD1 chr1 115238170 FYTTD1 chr3 197483395 Exonic hg19 NA BX647833 Out-of-frame Inter-chr p13.2 q29 109203 ChimerSeq ChiTaRs ChiTaRs FAM193A-SGSM2 FAM193A chr4 2661770 SGSM2 chr17 2282907 Exonic hg19 NA CV571420 Out-of-frame Inter-chr p16.3 p13.3 Transcription factor 109204 ChimerSeq ChiTaRs ChiTaRs SECISBP2-ENY2 SECISBP2 chr9 91934712 ENY2 chr8 110355634 Exonic hg19 NA DB133597 Out-of-frame Inter-chr q22.2 q23.1 109205 ChimerSeq ChiTaRs ChiTaRs NUCKS1-WNK1 NUCKS1 chr1 205686678 WNK1 chr12 977854 Exonic hg19 NA AI825705 Out-of-frame Inter-chr q32.1 p13.33 109206 ChimerSeq ChiTaRs ChiTaRs TMSB4X-CROCC TMSB4X chrX 12995180 CROCC chr1 17097894 Exonic hg19 NA BF029317 Out-of-frame Inter-chr p22.2 p36.13 109207 ChimerSeq ChiTaRs ChiTaRs HEATR2-AGPS HEATR2 chr7 825405 AGPS chr2 178408042 Exonic hg19 NA BC008192 Out-of-frame Inter-chr q31.2 109208 ChimerSeq ChiTaRs ChiTaRs LAPTM5-AFAP1L1 LAPTM5 chr1 31230621 AFAP1L1 chr5 148691717 Exonic hg19 NA AK303314 Out-of-frame Inter-chr p35.2 q32 109209 ChimerSeq ChiTaRs ChiTaRs VPS28-LOC100507412 VPS28 chr8 145650139 LOC100507412 chr? 110028 Exonic hg19 NA BU617859 Out-of-frame Inter-chr q24.3 109210 ChimerSeq ChiTaRs ChiTaRs SLIT1-FAM208B SLIT1 chr10 98758125 FAM208B chr10 5789503 Exonic hg19 NA BM676949 Out-of-frame Intra-chr q24.1 p15.1 109211 ChimerSeq ChiTaRs ChiTaRs PNKD-H19 PNKD chr2 219157226 H19 chr11 2018600 Exonic hg19 NA DA440605 Out-of-frame Inter-chr q35 p15.5 Tumor suppressor gene 109212 ChimerSeq ChiTaRs ChiTaRs LRRFIP2-BGN LRRFIP2 chr3 37216077 BGN chrX 152774210 Exonic hg19 NA ES309565 Out-of-frame Inter-chr p22.2 q28 109213 ChimerSeq ChiTaRs ChiTaRs LOC100505761-ERICH1 LOC100505761 chr10 104210087 ERICH1 chr8 623968 Exonic hg19 NA DA630608 5'UTR-CDS Inter-chr 109214 ChimerSeq ChiTaRs ChiTaRs PIGR-DNAJC5 PIGR chr1 207110862 DNAJC5 chr20 62566666 Exonic hg19 NA BG981391 Out-of-frame Inter-chr q32.1 q13.33 109215 ChimerSeq ChiTaRs ChiTaRs EHF-GDI2 EHF chr11 34642776 GDI2 chr10 5827924 Exonic hg19 NA DA040259 Out-of-frame Inter-chr p13 Tumor suppressor gene Transcription factor p15.1 109216 ChimerSeq ChiTaRs ChiTaRs SAA1-APOA2 SAA1 chr11 18290879 APOA2 chr1 161192152 Exonic hg19 NA BG562889 Out-of-frame Inter-chr p15.1 Tumor suppressor gene q23.3 109217 ChimerSeq ChiTaRs ChiTaRs RNF19A-STAU2 RNF19A chr8 101322202 STAU2 chr8 74525995 Exonic hg19 NA DA201993 Out-of-frame Intra-chr q22.2 q21.11 109218 ChimerSeq ChiTaRs ChiTaRs HTN1-KYNU HTN1 chr4 70924377 KYNU chr2 143795116 Exonic hg19 NA BP333200 Out-of-frame Inter-chr q22.2 109219 ChimerSeq ChiTaRs ChiTaRs SAT1-FNDC3B SAT1 chrX 23804325 FNDC3B chr3 172117517 Exonic hg19 NA BQ023122 Out-of-frame Inter-chr p22.11 q26.31 109220 ChimerSeq ChiTaRs ChiTaRs GOLGA7-FYTTD1 GOLGA7 chr8 41367975 FYTTD1 chr3 197509858 Exonic hg19 NA BQ308595 Out-of-frame Inter-chr p11.21 q29 109221 ChimerSeq ChiTaRs ChiTaRs SAT1-MPHOSPH8 SAT1 chrX 23804319 MPHOSPH8 chr13 20224145 Exonic hg19 NA BM263362 Out-of-frame Inter-chr p22.11 q12.11 109222 ChimerSeq ChiTaRs ChiTaRs PRPF4B-SEC63 PRPF4B chr6 4062947 SEC63 chr6 108192736 Exonic hg19 NA BQ332983 Out-of-frame Intra-chr p25.2 q21 109223 ChimerSeq ChiTaRs ChiTaRs ATP1A1-PHIP ATP1A1 chr1 116947383 PHIP chr6 79735217 Exonic hg19 NA X04297 Out-of-frame Inter-chr p13.1 q14.1 109224 ChimerSeq ChiTaRs ChiTaRs LAP3-SERPINA1 LAP3 chr4 17585220 SERPINA1 chr14 94844710 Exonic hg19 NA BG566103 Out-of-frame Inter-chr p15.32 q32.13 109225 ChimerSeq ChiTaRs ChiTaRs ARMC8-PGA3 ARMC8 chr3 137965314 PGA3 chr11 60980265 Exonic hg19 NA AK098500 Out-of-frame Inter-chr q22.3 q12.2 109226 ChimerSeq ChiTaRs ChiTaRs IKZF1-B2M IKZF1 chr7 50367356 B2M chr15 45007620 Exonic hg19 NA AW405039 Out-of-frame Inter-chr p12.2 Oncogene Tumor suppressor gene Transcription factor Oncogene 109227 ChimerSeq ChiTaRs ChiTaRs ITM2C-SLC2A5 ITM2C chr2 231740437 SLC2A5 chr1 9097639 Exonic hg19 NA BP264264 Out-of-frame Inter-chr q37.1 p36.23 109228 ChimerSeq ChiTaRs ChiTaRs HSPA5-PPM1G HSPA5 chr9 127999277 PPM1G chr2 27606270 Exonic hg19 NA BF801833 Out-of-frame Inter-chr q33.3 p23.3 109229 ChimerSeq ChiTaRs ChiTaRs BRI3-COL3A1 BRI3 chr7 97920834 COL3A1 chr2 189854854 Exonic hg19 NA BU625345 Out-of-frame Inter-chr q21.3 q32.2 109230 ChimerSeq ChiTaRs ChiTaRs SERPINB6-CSH1 SERPINB6 chr6 2969498 CSH1 chr17 61972911 Exonic hg19 NA BE929511 Out-of-frame Inter-chr p25.2 q23.3 109231 ChimerSeq ChiTaRs ChiTaRs CCNL2-UBA2 CCNL2 chr1 1326254 UBA2 chr19 34949703 Exonic hg19 NA CD102672 Out-of-frame Inter-chr p36.33 q13.11 109232 ChimerSeq ChiTaRs ChiTaRs CHRAC1-C19orf68 CHRAC1 chr8 141525277 C19orf68 chr19 48700494 Exonic hg19 NA BG170848 Out-of-frame Inter-chr q24.3 q13.33 109233 ChimerSeq ChiTaRs ChiTaRs ZNF703-ARSJ ZNF703 chr8 37556259 ARSJ chr4 114899683 Exonic hg19 NA DA558581 Out-of-frame Inter-chr p11.23 Transcription factor q26 109234 ChimerSeq ChiTaRs ChiTaRs DBI-UBB DBI chr2 120130114 UBB chr17 16285804 Exonic hg19 NA EL951497 Out-of-frame Inter-chr q14.2 p11.2 109235 ChimerSeq ChiTaRs ChiTaRs PDIA4-CRHR2 PDIA4 chr7 148700288 CRHR2 chr7 30702421 Exonic hg19 NA AA947407 Out-of-frame Intra-chr q36.1 p14.3 109236 ChimerSeq ChiTaRs ChiTaRs RNF216-BABAM1 RNF216 chr7 5821273 BABAM1 chr19 17392866 Exonic hg19 NA BF982291 Out-of-frame Inter-chr p22.1 p13.11 109237 ChimerSeq ChiTaRs ChiTaRs SCCPDH-LUM SCCPDH chr1 246927610 LUM chr12 91502648 Exonic hg19 NA AU100094 Out-of-frame Inter-chr q44 q21.33 109238 ChimerSeq ChiTaRs ChiTaRs CD74-SGK1 CD74 chr5 149792314 SGK1 chr6 134494675 Exonic hg19 NA BP270914 Out-of-frame Inter-chr q33.1 q23.2 AGC:SGK Oncogene 109239 ChimerSeq ChiTaRs ChiTaRs C6orf48-ST8SIA4 C6orf48 chr6 3098574 ST8SIA4 chr5 100222287 Exonic hg19 NA DB164704 Out-of-frame Inter-chr q21.1 109240 ChimerSeq ChiTaRs ChiTaRs NUCB2-PAK3 NUCB2 chr11 17332484 PAK3 chrX 110411761 Exonic hg19 NA CB243708 Out-of-frame Inter-chr p15.1 q23 STE:STE20 Oncogene 109241 ChimerSeq ChiTaRs ChiTaRs SNHG3-STK3 SNHG3 chr1 28834673 STK3 chr8 99467899 Exonic hg19 NA CN419802 Out-of-frame Inter-chr p35.3 q22.2 109242 ChimerSeq ChiTaRs ChiTaRs SZT2-PLAGL1 SZT2 chr1 43897466 PLAGL1 chr6 144324367 Exonic hg19 NA N76235 Out-of-frame Inter-chr p34.2 q24.2 Tumor suppressor gene Transcription factor 109243 ChimerSeq ChiTaRs ChiTaRs THRAP3-TBC1D2B THRAP3 chr1 36770634 TBC1D2B chr15 78287846 Exonic hg19 NA W25181 Out-of-frame Inter-chr p34.3 q25.1 109244 ChimerSeq ChiTaRs ChiTaRs OPTN-GNS OPTN chr10 13164435 GNS chr12 65108698 Exonic hg19 NA N40382 Out-of-frame Inter-chr p13 q14.3 109245 ChimerSeq ChiTaRs ChiTaRs USF1-ELOVL5 USF1 chr1 161014737 ELOVL5 chr6 53132572 Exonic hg19 NA AV686607 Out-of-frame Inter-chr q23.3 Transcription factor p12.1 109246 ChimerSeq ChiTaRs ChiTaRs CASP6-ACADSB CASP6 chr4 110610657 ACADSB chr10 124813793 Exonic hg19 NA BE567326 Out-of-frame Inter-chr q25 q26.13 109247 ChimerSeq ChiTaRs ChiTaRs IARS-IFT46 IARS chr9 95027402 IFT46 chr11 118430517 Exonic hg19 NA BE560487 Out-of-frame Inter-chr q22.31 q23.3 109248 ChimerSeq ChiTaRs ChiTaRs WDR74-KNG1 WDR74 chr11 62609281 KNG1 chr3 186435141 Exonic hg19 NA AU120291 Out-of-frame Inter-chr q12.3 q27.3 109249 ChimerSeq ChiTaRs ChiTaRs RGS7-SGSH RGS7 chr1 241161840 SGSH chr17 78193746 Exonic hg19 NA CA306626 Out-of-frame Inter-chr q43 q25.3 109250 ChimerSeq ChiTaRs ChiTaRs PRICKLE2-TCEA3 PRICKLE2 chr3 64084597 TCEA3 chr1 23707857 Exonic hg19 NA BC019675 Out-of-frame Inter-chr p14.1 109251 ChimerSeq ChiTaRs ChiTaRs CIDEC-THBS1 CIDEC chr3 10011457 THBS1 chr15 39881405 Exonic hg19 NA AW085572 Out-of-frame Inter-chr p25.3 q14 Oncogene Tumor suppressor gene 109252 ChimerSeq ChiTaRs ChiTaRs CCDC58-ENO1 CCDC58 chr3 122102074 ENO1 chr1 8921063 Exonic hg19 NA AK090592 5'UTR-3'UTR Inter-chr q21.1 p36.23 109253 ChimerSeq ChiTaRs ChiTaRs HUWE1-SYN3 HUWE1 chrX 53602702 SYN3 chr22 33255949 Exonic hg19 NA AA368608 Out-of-frame Inter-chr p11.22 q12.3 109254 ChimerSeq ChiTaRs ChiTaRs TTC26-ZFP36L1 TTC26 chr7 138822663 ZFP36L1 chr14 69256161 Exonic hg19 NA CN312778 Out-of-frame Inter-chr q34 q24.1 109255 ChimerSeq ChiTaRs ChiTaRs RPL31-TNKS2 RPL31 chr2 101622534 TNKS2 chr10 93565800 Exonic hg19 NA BC024171 Out-of-frame Inter-chr q11.2 q23.32 109256 ChimerSeq ChiTaRs ChiTaRs WDR74-DHTKD1 WDR74 chr11 62609281 DHTKD1 chr10 12139775 Exonic hg19 NA DA440878 Out-of-frame Inter-chr q12.3 p14 109257 ChimerSeq ChiTaRs ChiTaRs FLNA-GTF3C6 FLNA chrX 153578539 GTF3C6 chr6 111280374 Exonic hg19 NA BG028038 Out-of-frame Inter-chr q28 Tumor suppressor gene q21 109258 ChimerSeq ChiTaRs ChiTaRs ADCY1-KDM3A ADCY1 chr7 45754880 KDM3A chr2 86719270 Exonic hg19 NA BM693341 Out-of-frame Inter-chr p12.3 p11.2 Tumor suppressor gene 109259 ChimerSeq ChiTaRs ChiTaRs NDUFS6-NFE2L2 NDUFS6 chr5 1814558 NFE2L2 chr2 178098929 Exonic hg19 NA BP291244 Out-of-frame Inter-chr p15.33 q31.2 Oncogene Transcription factor 109260 ChimerSeq ChiTaRs ChiTaRs VIPR1-SCIN VIPR1 chr3 42578602 SCIN chr7 12666226 Exonic hg19 NA BP223196 Out-of-frame Inter-chr p22.1 p21.3 109261 ChimerSeq ChiTaRs ChiTaRs SNHG6-SET SNHG6 chr8 67834787 SET chr9 131457816 Exonic hg19 NA AV757657 Out-of-frame Inter-chr q13.1 q34.11 109262 ChimerSeq ChiTaRs ChiTaRs CGA-ZNF397 CGA chr6 87795273 ZNF397 chr18 32823125 Exonic hg19 NA CF528409 Out-of-frame Inter-chr q14.3 q12.2 Transcription factor 109263 ChimerSeq ChiTaRs ChiTaRs KIAA1462-SRRT KIAA1462 chr10 30302530 SRRT chr7 100482871 Exonic hg19 NA BE828436 Out-of-frame Inter-chr p11.23 q22.1 109264 ChimerSeq ChiTaRs ChiTaRs SPRY4-RNASET2 SPRY4 chr5 141691727 RNASET2 chr6 167368410 Exonic hg19 NA AA482318 Out-of-frame Inter-chr q31.3 Tumor suppressor gene q27 Tumor suppressor gene 109265 ChimerSeq ChiTaRs ChiTaRs RAB1A-COL1A1 RAB1A chr2 65318197 COL1A1 chr17 48263322 Exonic hg19 NA BF326262 Out-of-frame Inter-chr p14 q21.33 Oncogene 109266 ChimerSeq ChiTaRs ChiTaRs LOC440028-TMEM130 LOC440028 chr11 9780051 TMEM130 chr7 98457871 Exonic hg19 NA DA473507 Out-of-frame Inter-chr q22.1 109267 ChimerSeq ChiTaRs ChiTaRs POLD2-CHST14 POLD2 chr7 44154406 CHST14 chr15 40763884 Exonic hg19 NA BQ447574 Out-of-frame Inter-chr p13 q15.1 109268 ChimerSeq ChiTaRs ChiTaRs BTBD9-VSNL1 BTBD9 chr6 38548104 VSNL1 chr2 17836700 Exonic hg19 NA AX746689 Out-of-frame Inter-chr p21.2 p24.2 Tumor suppressor gene 109269 ChimerSeq ChiTaRs ChiTaRs GRSF1-CIAO1 GRSF1 chr4 71705220 CIAO1 chr2 96938508 Exonic hg19 NA AW779166 5'UTR-3'UTR Inter-chr q13.3 q11.2 109270 ChimerSeq ChiTaRs ChiTaRs FAT1-SPARC FAT1 chr4 187532898 SPARC chr5 151041997 Exonic hg19 NA BP382257 Out-of-frame Inter-chr q35.2 Tumor suppressor gene q33.1 Tumor suppressor gene 109271 ChimerSeq ChiTaRs ChiTaRs AOX1-ALB AOX1 chr2 201535676 ALB chr4 74283944 Exonic hg19 NA AV653907 Out-of-frame Inter-chr q33.1 q13.3 109272 ChimerSeq ChiTaRs ChiTaRs DSTYK-BOLA2 DSTYK chr1 205126514 BOLA2 chr16 29982800 Exonic hg19 NA BG260838 CDS-3'UTR Inter-chr q32.1 p11.2 109273 ChimerSeq ChiTaRs ChiTaRs TMEM59-MDGA2 TMEM59 chr1 54511454 MDGA2 chr14 47670148 Exonic hg19 NA BF733157 Out-of-frame Inter-chr p32.3 q21.3 109274 ChimerSeq ChiTaRs ChiTaRs SLIT3-MAGED2 SLIT3 chr5 168271856 MAGED2 chrX 54834834 Exonic hg19 NA BC023515 Out-of-frame Inter-chr q35.1 p11.21 109275 ChimerSeq ChiTaRs ChiTaRs MLL5-SDC4 MLL5 chr7 104719333 SDC4 chr20 43955050 Exonic hg19 NA BE177716 Out-of-frame Inter-chr q13.12 109276 ChimerSeq ChiTaRs ChiTaRs ANKH-TSPAN3 ANKH chr5 14871585 TSPAN3 chr15 77338370 Exonic hg19 NA AK222631 Out-of-frame Inter-chr p15.2 q24.3 109277 ChimerSeq ChiTaRs ChiTaRs WDR74-RALGDS WDR74 chr11 62609281 RALGDS chr9 135979147 Exonic hg19 NA DA276726 Out-of-frame Inter-chr q12.3 q34.2 Oncogene 109278 ChimerSeq ChiTaRs ChiTaRs TNFRSF14-MICAL1 TNFRSF14 chr1 2493212 MICAL1 chr6 109767108 Exonic hg19 NA BI023922 Out-of-frame Inter-chr p36.32 Oncogene q21 109279 ChimerSeq ChiTaRs ChiTaRs RNU6-1-EIF4G1 RNU6-1 chr3 180949632 EIF4G1 chr3 184038425 Exonic hg19 NA BF696853 Out-of-frame Intra-chr q23 q27.1 109280 ChimerSeq ChiTaRs ChiTaRs SLC4A2-RPL7 SLC4A2 chr7 150761984 RPL7 chr8 74202904 Exonic hg19 NA BG394529 Out-of-frame Inter-chr q36.1 q21.11 109281 ChimerSeq ChiTaRs ChiTaRs CXCR4-TSC22D3 CXCR4 chr2 136875708 TSC22D3 chrX 106957444 Exonic hg19 NA CT004483 Out-of-frame Inter-chr q22.1 q22.3 109282 ChimerSeq ChiTaRs ChiTaRs FAM172A-DFNA5 FAM172A chr5 92954429 DFNA5 chr7 24784199 Exonic hg19 NA DA269661 Out-of-frame Inter-chr q15 Tumor suppressor gene p15.3 Tumor suppressor gene 109283 ChimerSeq ChiTaRs ChiTaRs KPNA4-ANO10 KPNA4 chr3 160219650 ANO10 chr3 43618607 Exonic hg19 NA AU124276 Out-of-frame Intra-chr q25.33 p21.33 109284 ChimerSeq ChiTaRs ChiTaRs ENSA-RASEF ENSA chr1 150602063 RASEF chr9 85640745 Exonic hg19 NA DB237062 Out-of-frame Inter-chr q21.3 q21.32 109285 ChimerSeq ChiTaRs ChiTaRs PLP1-MAN2A2 PLP1 chrX 103045735 MAN2A2 chr15 91464074 Exonic hg19 NA AV723721 Out-of-frame Inter-chr q22.2 q26.1 109286 ChimerSeq ChiTaRs ChiTaRs PTEN-PEBP1 PTEN chr10 89726595 PEBP1 chr12 118582915 Exonic hg19 NA BG610830 Out-of-frame Inter-chr q23.31 Oncogene Tumor suppressor gene q24.23 Tumor suppressor gene 109287 ChimerSeq ChiTaRs ChiTaRs PRKCDBP-MKRN2 PRKCDBP chr11 6341719 MKRN2 chr3 12625107 Exonic hg19 NA X06409 Out-of-frame Inter-chr Tumor suppressor gene p25.2 109288 ChimerSeq ChiTaRs ChiTaRs RPL35-NOC2L RPL35 chr9 127620282 NOC2L chr1 892529 Exonic hg19 NA CA433490 Out-of-frame Inter-chr q33.3 p36.33 109289 ChimerSeq ChiTaRs ChiTaRs FRMPD4-KCNMA1 FRMPD4 chrX 12734468 KCNMA1 chr10 78646243 Exonic hg19 NA DA133314 Out-of-frame Inter-chr p22.2 q22.3 109290 ChimerSeq ChiTaRs ChiTaRs ZMYND11-ZFAND4 ZMYND11 chr10 226068 ZFAND4 chr10 46122451 Exonic hg19 NA BI669215 Out-of-frame Intra-chr p15.3 Tumor suppressor gene q11.22 KB 109291 ChimerSeq ChiTaRs ChiTaRs NCF2-TUBA1C NCF2 chr1 183525014 TUBA1C chr12 49666095 Exonic hg19 NA CD368754 Out-of-frame Inter-chr q25.3 q13.12 109292 ChimerSeq ChiTaRs ChiTaRs SLC25A44-IGF2R SLC25A44 chr1 156182587 IGF2R chr6 160526089 Exonic hg19 NA AA740262 3'UTR-CDS Inter-chr q22 q25.3 Oncogene Tumor suppressor gene 109293 ChimerSeq ChiTaRs ChiTaRs ALPI-LOC100507412 ALPI chr2 233321734 LOC100507412 chr? 110326 Exonic hg19 NA BP270860 Out-of-frame Inter-chr q37.1 109294 ChimerSeq ChiTaRs ChiTaRs YPEL5-DGCR2 YPEL5 chr2 30381687 DGCR2 chr22 19027208 Exonic hg19 NA DB114316 Out-of-frame Inter-chr p23.1 q11.21 109295 ChimerSeq ChiTaRs ChiTaRs PHGDH-EPHX1 PHGDH chr1 120286838 EPHX1 chr1 226016559 Exonic hg19 NA AW261826 Out-of-frame Intra-chr p12 q42.12 109296 ChimerSeq ChiTaRs ChiTaRs FABP3-UBL3 FABP3 chr1 31845920 UBL3 chr13 30340463 Exonic hg19 NA BP277249 Out-of-frame Inter-chr p35.2 Tumor suppressor gene q12.3 109297 ChimerSeq ChiTaRs ChiTaRs ADCY2-CNP ADCY2 chr1 152005126 CNP chr17 40123919 Exonic hg19 NA CA441871 Out-of-frame Inter-chr p15.31 q21.2 109298 ChimerSeq ChiTaRs ChiTaRs XG-PGM1 XG chrX 2693841 PGM1 chr1 64100606 Exonic hg19 NA BE836713 Out-of-frame Inter-chr p22.33 p31.3 109299 ChimerSeq ChiTaRs ChiTaRs IVNS1ABP-ZC3H13 IVNS1ABP chr1 185268987 ZC3H13 chr13 46549505 Exonic hg19 NA BE932758 Out-of-frame Inter-chr q25.3 q14.13 109300 ChimerSeq ChiTaRs ChiTaRs SCARB2-JAK1 SCARB2 chr4 77082807 JAK1 chr1 65299915 Exonic hg19 NA BQ361764 Out-of-frame Inter-chr q21.1 p31.3 TK:JakA Oncogene 109301 ChimerSeq ChiTaRs ChiTaRs RAD21-ZC4H2 RAD21 chr8 117878972 ZC4H2 chrX 64136888 Exonic hg19 NA CX788771 Out-of-frame Inter-chr q24.11 q11.2 109302 ChimerSeq ChiTaRs ChiTaRs MCU-ARHGAP1 MCU chr10 74535598 ARHGAP1 chr11 46699049 Exonic hg19 NA BP419174 Out-of-frame Inter-chr q22.1 p11.2 109303 ChimerSeq ChiTaRs ChiTaRs RPL37A-KLHL12 RPL37A chr2 217366190 KLHL12 chr1 202887306 Exonic hg19 NA AA631668 Out-of-frame Inter-chr q35 q32.1 109304 ChimerSeq ChiTaRs ChiTaRs OSBPL10-OLA1 OSBPL10 chr3 31843444 OLA1 chr2 174946660 Exonic hg19 NA BQ348677 Out-of-frame Inter-chr p22.3 q31.1 109305 ChimerSeq ChiTaRs ChiTaRs PNLIP-CPB1 PNLIP chr10 118307949 CPB1 chr3 148558670 Exonic hg19 NA BC015104 Out-of-frame Inter-chr q25.3 q24 109306 ChimerSeq ChiTaRs ChiTaRs LOC100507443-C12orf60 LOC100507443 chr2 208988886 C12orf60 chr12 14959201 Exonic hg19 NA BU734844 Out-of-frame Inter-chr p12.3 109307 ChimerSeq ChiTaRs ChiTaRs RFTN1-MAPK9 RFTN1 chr3 16555218 MAPK9 chr5 179696281 Exonic hg19 NA CB995744 Out-of-frame Inter-chr p24.3 q35.3 Tumor suppressor gene 109308 ChimerSeq ChiTaRs ChiTaRs SCARB2-LAMP2 SCARB2 chr4 77081203 LAMP2 chrX 119571305 Exonic hg19 NA BE890392 Out-of-frame Inter-chr q21.1 q24 109309 ChimerSeq ChiTaRs ChiTaRs RAB13-CDH23 RAB13 chr1 153954874 CDH23 chr10 73520314 Exonic hg19 NA W46202 Out-of-frame Inter-chr q21.3 q22.1 109310 ChimerSeq ChiTaRs ChiTaRs VDAC3-CDKN1B VDAC3 chr8 42259537 CDKN1B chr12 12875241 Exonic hg19 NA BE733709 Out-of-frame Inter-chr p11.21 p13.1 Tumor suppressor gene 109311 ChimerSeq ChiTaRs ChiTaRs CCDC58-CLIP1 CCDC58 chr3 122102059 CLIP1 chr12 122763346 Exonic hg19 NA DA257036 Out-of-frame Inter-chr q21.1 q24.31 109312 ChimerSeq ChiTaRs ChiTaRs SMYD3-PDIA6 SMYD3 chr1 246199283 PDIA6 chr2 10928841 Exonic hg19 NA BE837655 Out-of-frame Inter-chr q44 Transcription factor p25.1 109313 ChimerSeq ChiTaRs ChiTaRs RELL1-XIAP RELL1 chr4 37612705 XIAP chrX 123046191 Exonic hg19 NA BM690816 Out-of-frame Inter-chr p14 q25 109314 ChimerSeq ChiTaRs ChiTaRs LOC151009-ATRNL1 LOC151009 chr2 111141983 ATRNL1 chr10 117221449 Exonic hg19 NA DA155711 Out-of-frame Inter-chr q25.3 109315 ChimerSeq ChiTaRs ChiTaRs CXorf38-ACAA2 CXorf38 chrX 40506774 ACAA2 chr18 47322179 Exonic hg19 NA DA908810 Out-of-frame Inter-chr p11.4 q21.1 109316 ChimerSeq ChiTaRs ChiTaRs GPM6A-ANKRD17 GPM6A chr4 176561347 ANKRD17 chr4 73990693 Exonic hg19 NA AW957350 Out-of-frame Intra-chr q34.2 q13.3 109317 ChimerSeq ChiTaRs ChiTaRs MRPL30-CS MRPL30 chr2 99814077 CS chr12 56667481 Exonic hg19 NA BM766816 Out-of-frame Inter-chr q11.2 q13.3 109318 ChimerSeq ChiTaRs ChiTaRs NSMAF-UQCRH NSMAF chr8 59572093 UQCRH chr1 46769392 Exonic hg19 NA AK304884 Out-of-frame Inter-chr q12.1 p33 109319 ChimerSeq ChiTaRs ChiTaRs MGST2-PRDX6 MGST2 chr4 140661422 PRDX6 chr1 173450488 Exonic hg19 NA BG208010 Out-of-frame Inter-chr q31.1 q25.1 109320 ChimerSeq ChiTaRs ChiTaRs XDH-LOC146880 XDH chr2 31558716 LOC146880 chr17 62745805 Exonic hg19 NA BE774864 Out-of-frame Inter-chr p23.1 109321 ChimerSeq ChiTaRs ChiTaRs COL6A3-LGMN COL6A3 chr2 238232742 LGMN chr14 93178236 Exonic hg19 NA AW450755 Out-of-frame Inter-chr q37.3 q32.12 109322 ChimerSeq ChiTaRs ChiTaRs DDX50-WASF1 DDX50 chr10 70672986 WASF1 chr6 110421022 Exonic hg19 NA AK056044 Out-of-frame Inter-chr q22.1 q21 109323 ChimerSeq ChiTaRs ChiTaRs PANK3-SLC25A32 PANK3 chr5 167984617 SLC25A32 chr8 104411711 Exonic hg19 NA BG776605 Out-of-frame Inter-chr q34 q22.3 109324 ChimerSeq ChiTaRs ChiTaRs IARS-TTR IARS chr9 95055977 TTR chr18 29171840 Exonic hg19 NA CB999552 Out-of-frame Inter-chr q22.31 q12.1 109325 ChimerSeq ChiTaRs ChiTaRs EEF1G-EEF1G EEF1G chr11 62338479 EEF1G chr11 62334964 Exonic hg19 NA BI046948 Out-of-frame Intra-chr q12.3 q12.3 109326 ChimerSeq ChiTaRs ChiTaRs GFM1-SMARCA2 GFM1 chr3 158362483 SMARCA2 chr9 2086981 Exonic hg19 NA DA528491 Out-of-frame Inter-chr q25.32 p24.3 Tumor suppressor gene 109327 ChimerSeq ChiTaRs ChiTaRs SNX27-C9orf78 SNX27 chr1 151666487 C9orf78 chr9 132590061 Exonic hg19 NA BC051817 Out-of-frame Inter-chr q21.3 q34.11 109328 ChimerSeq ChiTaRs ChiTaRs HLA-E-ETF1 HLA-E chr6 1789963 ETF1 chr5 137846830 Exonic hg19 NA BG534374 Out-of-frame Inter-chr q31.2 109329 ChimerSeq ChiTaRs ChiTaRs G6PD-PRKCA G6PD chrX 153763408 PRKCA chr17 64806066 Exonic hg19 NA M12996 Out-of-frame Inter-chr q28 Oncogene q24.2 109330 ChimerSeq ChiTaRs ChiTaRs EIF3H-NRL EIF3H chr8 117657177 NRL chr14 24584067 Exonic hg19 NA AI861912 Out-of-frame Inter-chr q24.11 q12 Transcription factor 109331 ChimerSeq ChiTaRs ChiTaRs HNRNPD-ELL HNRNPD chr4 83295148 ELL chr19 18554825 Exonic hg19 NA DB050538 Out-of-frame Inter-chr q21.22 p13.11 109332 ChimerSeq ChiTaRs ChiTaRs ATP5G3-SPATA13 ATP5G3 chr2 176043044 SPATA13 chr13 24860420 Exonic hg19 NA CN480751 Out-of-frame Inter-chr q31.1 q12.12 109333 ChimerSeq ChiTaRs ChiTaRs CTNNAL1-ZBTB7C CTNNAL1 chr9 111710517 ZBTB7C chr18 45554447 Exonic hg19 NA BF885210 Out-of-frame Inter-chr q31.3 q21.1 Tumor suppressor gene Transcription factor 109334 ChimerSeq ChiTaRs ChiTaRs TMEM9B-NPIPB7 TMEM9B chr11 8969629 NPIPB7 chr16 28975467 Exonic hg19 NA AA150513 Out-of-frame Inter-chr p15.4 p12.1 109335 ChimerSeq ChiTaRs ChiTaRs LBH-RPL8 LBH chr2 30482430 RPL8 chr8 146017411 Exonic hg19 NA BG924889 Out-of-frame Inter-chr p23.1 q24.3 109336 ChimerSeq ChiTaRs ChiTaRs G3BP1-VTI1B G3BP1 chr5 151151597 VTI1B chr14 68123195 Exonic hg19 NA BX644189 5'UTR-CDS Inter-chr q33.1 q24.1 109337 ChimerSeq ChiTaRs ChiTaRs ZFP36L2-RPL36 ZFP36L2 chr2 43451353 RPL36 chr19 5691358 Exonic hg19 NA BG271954 Out-of-frame Inter-chr p21 Tumor suppressor gene p13.3 109338 ChimerSeq ChiTaRs ChiTaRs HMGA1-H19 HMGA1 chr6 34213340 H19 chr11 2017823 Exonic hg19 NA BE901532 Out-of-frame Inter-chr p21.31 Transcription factor p15.5 Tumor suppressor gene 109339 ChimerSeq ChiTaRs ChiTaRs SUPT7L-RPL38 SUPT7L chr2 27878441 RPL38 chr17 72200077 Exonic hg19 NA BI861689 Out-of-frame Inter-chr p23.3 q25.1 109340 ChimerSeq ChiTaRs ChiTaRs GPR98-FBXO34 GPR98 chr5 90159676 FBXO34 chr14 55852585 Exonic hg19 NA DA244229 Out-of-frame Inter-chr q22.3 109341 ChimerSeq ChiTaRs ChiTaRs PGRMC2-IRF2BP2 PGRMC2 chr4 129208953 IRF2BP2 chr1 234742663 Exonic hg19 NA BC028143 Out-of-frame Inter-chr q28.2 Tumor suppressor gene q42.3 109342 ChimerSeq ChiTaRs ChiTaRs PHRF1-HCFC1R1 PHRF1 chr11 605724 HCFC1R1 chr16 3072633 Exonic hg19 NA AK308541 CDS-3'UTR Inter-chr p15.5 p13.3 109343 ChimerSeq ChiTaRs ChiTaRs UBA1-FAT4 UBA1 chrX 47064653 FAT4 chr4 126412752 Exonic hg19 NA BX281972 Out-of-frame Inter-chr p11.3 q28.1 Tumor suppressor gene 109344 ChimerSeq ChiTaRs ChiTaRs TTTY14-RHOG TTTY14 chrY 21153091 RHOG chr11 3848225 Exonic hg19 NA BM841226 Out-of-frame Inter-chr q11.222 p15.4 109345 ChimerSeq ChiTaRs ChiTaRs ACTR1B-RDX ACTR1B chr2 98272523 RDX chr11 110104131 Exonic hg19 NA BU616876 Out-of-frame Inter-chr q11.2 q22.3 109346 ChimerSeq ChiTaRs ChiTaRs MDM4-SRGAP3 MDM4 chr1 204501374 SRGAP3 chr3 9101936 Exonic hg19 NA BP345804 Out-of-frame Inter-chr q32.1 Oncogene p25.3 Tumor suppressor gene 109347 ChimerSeq ChiTaRs ChiTaRs PCDH11X-BTG3 PCDH11X chrX 91079406 BTG3 chr21 18966562 Exonic hg19 NA BQ291951 Out-of-frame Inter-chr q21.31 Tumor suppressor gene 109348 ChimerSeq ChiTaRs ChiTaRs URM1-ARPC2 URM1 chr9 131140385 ARPC2 chr2 219114087 Exonic hg19 NA BF840371 In-Frame Inter-chr q34.11 q35 109349 ChimerSeq ChiTaRs ChiTaRs MTCH1-C3 MTCH1 chr6 36949329 C3 chr19 6680210 Exonic hg19 NA AA169517 Out-of-frame Inter-chr p21.2 p13.3 109350 ChimerSeq ChiTaRs ChiTaRs RPS6KA3-IRF3 RPS6KA3 chrX 20273653 IRF3 chr19 50165136 Exonic hg19 NA AW297289 Out-of-frame Inter-chr p22.12 q13.33 Tumor suppressor gene Transcription factor 109351 ChimerSeq ChiTaRs ChiTaRs LAMB1-KPNA3 LAMB1 chr7 107570012 KPNA3 chr13 50275998 Exonic hg19 NA CB119417 Out-of-frame Inter-chr q31.1 q14.2 109352 ChimerSeq ChiTaRs ChiTaRs SMARCD3-NPIPB7 SMARCD3 chr7 150946275 NPIPB7 chr16 28592375 Exonic hg19 NA BP276382 Out-of-frame Inter-chr q36.1 p12.1 109353 ChimerSeq ChiTaRs ChiTaRs SORT1-EEF1D SORT1 chr1 109856681 EEF1D chr8 144662875 Exonic hg19 NA BF912863 Out-of-frame Inter-chr p13.3 109354 ChimerSeq ChiTaRs ChiTaRs CD34-GIMAP4 CD34 chr1 208060816 GIMAP4 chr7 150269865 Exonic hg19 NA CB218257 Out-of-frame Inter-chr q32.2 q36.1 109355 ChimerSeq ChiTaRs ChiTaRs GSK3B-SGIP1 GSK3B chr3 119696188 SGIP1 chr1 67185044 Exonic hg19 NA R11870 Out-of-frame Inter-chr q13.33 CMGC:GSK Tumor suppressor gene p31.3 109356 ChimerSeq ChiTaRs ChiTaRs WDR74-GLUL WDR74 chr11 62609281 GLUL chr1 182353265 Exonic hg19 NA DA275818 Out-of-frame Inter-chr q12.3 q25.3 109357 ChimerSeq ChiTaRs ChiTaRs ASRGL1-MYBL2 ASRGL1 chr11 62124666 MYBL2 chr20 42340150 Exonic hg19 NA AI655904 Out-of-frame Inter-chr q12.3 q13.12 Transcription factor 109358 ChimerSeq ChiTaRs ChiTaRs INTS8-TALDO1 INTS8 chr8 95892446 TALDO1 chr11 764906 Exonic hg19 NA AX746892 Out-of-frame Inter-chr q22.1 p15.5 109359 ChimerSeq ChiTaRs ChiTaRs PLCE1-NEBL PLCE1 chr10 95791568 NEBL chr10 21071612 Exonic hg19 NA DA374251 Out-of-frame Intra-chr q23.33 Tumor suppressor gene p12.31 109360 ChimerSeq ChiTaRs ChiTaRs ABCE1-DDX39B ABCE1 chr4 146049667 DDX39B chr6 2828825 Exonic hg19 NA AB062293 Out-of-frame Inter-chr q31.21 109361 ChimerSeq ChiTaRs ChiTaRs NUCKS1-TNFRSF10C NUCKS1 chr1 205686146 TNFRSF10C chr8 22973047 Exonic hg19 NA AW298308 Out-of-frame Inter-chr q32.1 p21.3 109362 ChimerSeq ChiTaRs ChiTaRs NCL-SLC4A5 NCL chr2 232321732 SLC4A5 chr2 74588286 Exonic hg19 NA CN335139 Out-of-frame Intra-chr q37.1 p13.1 109363 ChimerSeq ChiTaRs ChiTaRs KDM5D-PRDX5 KDM5D chrY 21906597 PRDX5 chr11 64089094 Exonic hg19 NA BC011053 Out-of-frame Inter-chr q11.223 q13.1 109364 ChimerSeq ChiTaRs ChiTaRs PROSC-OSTM1 PROSC chr8 37623876 OSTM1 chr6 108363795 Exonic hg19 NA DB495307 Out-of-frame Inter-chr q21 109365 ChimerSeq ChiTaRs ChiTaRs MRS2-HMGB1 MRS2 chr6 24424361 HMGB1 chr13 31037743 Exonic hg19 NA BP243792 Out-of-frame Inter-chr p22.3 q12.3 109366 ChimerSeq ChiTaRs ChiTaRs PRRG1-PLP1 PRRG1 chrX 37285177 PLP1 chrX 103043392 Exonic hg19 NA AA348328 Out-of-frame Intra-chr p21.1 q22.2 109367 ChimerSeq ChiTaRs ChiTaRs TSG101-SLC20A1 TSG101 chr11 18503315 SLC20A1 chr2 113404469 Exonic hg19 NA BQ181066 Out-of-frame Inter-chr p15.1 Tumor suppressor gene q14.1 109368 ChimerSeq ChiTaRs ChiTaRs FSTL1-ABCB6 FSTL1 chr3 120113427 ABCB6 chr2 220084872 Exonic hg19 NA R74223 Out-of-frame Inter-chr q13.33 q35 109369 ChimerSeq ChiTaRs ChiTaRs MICB-HLA-H MICB chr6 2616725 HLA-H chr6 1189351 Exonic hg19 NA AW795874 Out-of-frame Intra-chr 109370 ChimerSeq ChiTaRs ChiTaRs LARS-HSP90AA1 LARS chr5 145531559 HSP90AA1 chr14 102551018 Exonic hg19 NA CB999031 Out-of-frame Inter-chr q32 q32.31 Oncogene 109371 ChimerSeq ChiTaRs ChiTaRs HPS5-LINC00264 HPS5 chr11 18332448 LINC00264 chr10 26879062 Exonic hg19 NA DB040105 Out-of-frame Inter-chr p15.1 109372 ChimerSeq ChiTaRs ChiTaRs CDH23-ZNF664 CDH23 chr10 73522267 ZNF664 chr12 124498778 Exonic hg19 NA AB073653 Out-of-frame Inter-chr q22.1 q24.31 Transcription factor 109373 ChimerSeq ChiTaRs ChiTaRs MOGS-HBB MOGS chr2 74688694 HBB chr11 5246903 Exonic hg19 NA BF899427 Out-of-frame Inter-chr p13.1 p15.4 109374 ChimerSeq ChiTaRs ChiTaRs CDC42BPA-SGK1 CDC42BPA chr1 227222439 SGK1 chr6 134493899 Exonic hg19 NA AA370052 Out-of-frame Inter-chr q42.13 q23.2 AGC:SGK Oncogene 109375 ChimerSeq ChiTaRs ChiTaRs BGN-ADAMTS1 BGN chrX 152775004 ADAMTS1 chr21 28209980 Exonic hg19 NA BF437005 3'UTR-CDS Inter-chr q28 q21.3 109376 ChimerSeq ChiTaRs ChiTaRs CD99L2-PACRGL CD99L2 chrX 149936673 PACRGL chr4 20703418 Exonic hg19 NA BP219412 Out-of-frame Inter-chr q28 p15.31 109377 ChimerSeq ChiTaRs ChiTaRs GNE-COL1A2 GNE chr9 36258445 COL1A2 chr7 94058697 Exonic hg19 NA AU117634 Out-of-frame Inter-chr p13.3 q21.3 109378 ChimerSeq ChiTaRs ChiTaRs ETNK2-MMP14 ETNK2 chr1 204100544 MMP14 chr14 23315755 Exonic hg19 NA BU624180 Out-of-frame Inter-chr q32.1 q11.2 109379 ChimerSeq ChiTaRs ChiTaRs ENO1-RPA1 ENO1 chr1 8930570 RPA1 chr17 1783837 Exonic hg19 NA BQ292604 Out-of-frame Inter-chr p36.23 p13.3 Tumor suppressor gene 109380 ChimerSeq ChiTaRs ChiTaRs SYNPO-TRIOBP SYNPO chr5 150029343 TRIOBP chr22 38169889 Exonic hg19 NA CB265417 Out-of-frame Inter-chr q33.1 q13.1 109381 ChimerSeq ChiTaRs ChiTaRs PSPH-GPATCH1 PSPH chr7 56148358 GPATCH1 chr19 33602637 Exonic hg19 NA BU633977 Out-of-frame Inter-chr p11.2 q13.11 109382 ChimerSeq ChiTaRs ChiTaRs RHBDD2-JUP RHBDD2 chr7 75517366 JUP chr17 39914986 Exonic hg19 NA BE089898 Out-of-frame Inter-chr q11.23 q21.2 Tumor suppressor gene 109383 ChimerSeq ChiTaRs ChiTaRs C2orf57-GABARAP C2orf57 chr2 232458903 GABARAP chr17 7143744 Exonic hg19 NA BC024251 Out-of-frame Inter-chr p13.1 Tumor suppressor gene 109384 ChimerSeq ChiTaRs ChiTaRs PUM1-ATP5C1 PUM1 chr1 31404895 ATP5C1 chr10 7844356 Exonic hg19 NA H12819 Out-of-frame Inter-chr p35.2 p14 109385 ChimerSeq ChiTaRs ChiTaRs PIK3C2B-ANKHD1 PIK3C2B chr1 204391826 ANKHD1 chr5 139908657 Exonic hg19 NA AA481487 Out-of-frame Inter-chr q32.1 Oncogene q31.3 109386 ChimerSeq ChiTaRs ChiTaRs DHFRL1-EMG1 DHFRL1 chr3 93778397 EMG1 chr12 7085382 Exonic hg19 NA AA580014 Out-of-frame Inter-chr p13.31 109387 ChimerSeq ChiTaRs ChiTaRs WNT9A-HNRNPM WNT9A chr1 228124284 HNRNPM chr19 8520329 Exonic hg19 NA AW369776 Out-of-frame Inter-chr q42.13 p13.2 109388 ChimerSeq ChiTaRs ChiTaRs PDZK1-ZFX PDZK1 chr1 145759304 ZFX chrX 24231239 Exonic hg19 NA BE961173 Out-of-frame Inter-chr q21.1 p22.11 Transcription factor 109389 ChimerSeq ChiTaRs ChiTaRs NUCKS1-SEMA3D NUCKS1 chr1 205683081 SEMA3D chr7 84628566 Exonic hg19 NA AA248206 Out-of-frame Inter-chr q32.1 q21.11 109390 ChimerSeq ChiTaRs ChiTaRs CLU-CDK9 CLU chr8 27457453 CDK9 chr9 130552020 Exonic hg19 NA BI003283 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q34.11 CMGC:CDK 109391 ChimerSeq ChiTaRs ChiTaRs SMAP1-NBEA SMAP1 chr6 71377845 NBEA chr13 35864524 Exonic hg19 NA DR000261 Out-of-frame Inter-chr q13 q13.3 109392 ChimerSeq ChiTaRs ChiTaRs KRTCAP2-PIGM KRTCAP2 chr1 155144325 PIGM chr1 159998972 Exonic hg19 NA AA215640 Out-of-frame Intra-chr q22 q23.2 109393 ChimerSeq ChiTaRs ChiTaRs IL17RD-CTNNA1 IL17RD chr3 57127869 CTNNA1 chr5 138223284 Exonic hg19 NA AU125508 Out-of-frame Inter-chr p14.3 Tumor suppressor gene q31.2 Oncogene 109394 ChimerSeq ChiTaRs ChiTaRs RPL7L1-MXRA7 RPL7L1 chr6 42854452 MXRA7 chr17 74672433 Exonic hg19 NA CN277738 Out-of-frame Inter-chr p21.1 q25.1 109395 ChimerSeq ChiTaRs ChiTaRs CHST2-CLN6 CHST2 chr3 142841812 CLN6 chr15 68499350 Exonic hg19 NA BQ185214 Out-of-frame Inter-chr q24 q23 109396 ChimerSeq ChiTaRs ChiTaRs EZR-NBAS EZR chr6 159190928 NBAS chr2 15511096 Exonic hg19 NA BE812261 Out-of-frame Inter-chr q25.3 p24.3 109397 ChimerSeq ChiTaRs ChiTaRs PLXND1-CYBRD1 PLXND1 chr3 129274260 CYBRD1 chr2 172412310 Exonic hg19 NA CA446678 Out-of-frame Inter-chr q22.1 q31.1 109398 ChimerSeq ChiTaRs ChiTaRs C3orf49-BDNF-AS C3orf49 chr3 63822036 BDNF-AS chr11 27603596 Exonic hg19 NA EC562909 Out-of-frame Inter-chr p14.1 p14.1 109399 ChimerSeq ChiTaRs ChiTaRs GAS5-HNRNPUL1 GAS5 chr1 173834819 HNRNPUL1 chr19 41768396 Exonic hg19 NA DC374592 Out-of-frame Inter-chr q25.1 Tumor suppressor gene q13.2 109400 ChimerSeq ChiTaRs ChiTaRs SND1-MYOG SND1 chr7 127569372 MYOG chr1 203052257 Exonic hg19 NA BC006347 Out-of-frame Inter-chr q32.1 q32.1 Transcription factor 109401 ChimerSeq ChiTaRs ChiTaRs DGAT1-TCEB1 DGAT1 chr8 145541627 TCEB1 chr8 74858969 Exonic hg19 NA BE734547 Out-of-frame Intra-chr q24.3 109402 ChimerSeq ChiTaRs ChiTaRs DNAH6-PSAP DNAH6 chr2 85005194 PSAP chr10 73576359 Exonic hg19 NA BP430892 Out-of-frame Inter-chr p11.2 q22.1 109403 ChimerSeq ChiTaRs ChiTaRs SLIT3-MAGED2 SLIT3 chr5 168199820 MAGED2 chrX 54834834 Exonic hg19 NA AF320070 Out-of-frame Inter-chr q35.1 p11.21 109404 ChimerSeq ChiTaRs ChiTaRs REG1A-GNA11 REG1A chr2 79350535 GNA11 chr19 3118933 Exonic hg19 NA BM126025 Out-of-frame Inter-chr p12 p13.3 Oncogene 109405 ChimerSeq ChiTaRs ChiTaRs CDC42EP3-FSCN1 CDC42EP3 chr2 37898785 FSCN1 chr7 5632832 Exonic hg19 NA AU280154 Out-of-frame Inter-chr p22.2 p22.1 109406 ChimerSeq ChiTaRs ChiTaRs C4orf3-ECT2 C4orf3 chr4 120221712 ECT2 chr3 172501628 Exonic hg19 NA DA445867 Out-of-frame Inter-chr q26 q26.31 Tumor suppressor gene 109407 ChimerSeq ChiTaRs ChiTaRs TM9SF3-TAGLN2 TM9SF3 chr10 98281353 TAGLN2 chr1 159887905 Exonic hg19 NA BG284831 Out-of-frame Inter-chr q24.1 q23.2 109408 ChimerSeq ChiTaRs ChiTaRs SPARC-COL2A1 SPARC chr5 151042388 COL2A1 chr12 48366752 Exonic hg19 NA DV462786 Out-of-frame Inter-chr q33.1 Tumor suppressor gene q13.11 109409 ChimerSeq ChiTaRs ChiTaRs ADAM18-PPAPDC1B ADAM18 chr8 39587582 PPAPDC1B chr8 38123659 Exonic hg19 NA AI206708 Out-of-frame Intra-chr 109410 ChimerSeq ChiTaRs ChiTaRs U2SURP-PLSCR1 U2SURP chr3 142720515 PLSCR1 chr3 146239620 Exonic hg19 NA BF668126 Out-of-frame Intra-chr q23 q24 Transcription factor 109411 ChimerSeq ChiTaRs ChiTaRs SYTL3-PROSER1 SYTL3 chr6 159086454 PROSER1 chr13 39586870 Exonic hg19 NA DA432910 Out-of-frame Inter-chr q25.3 q13.3 109412 ChimerSeq ChiTaRs ChiTaRs CANX-KIFC3 CANX chr5 179157926 KIFC3 chr16 57792333 Exonic hg19 NA BM680904 Out-of-frame Inter-chr q21 109413 ChimerSeq ChiTaRs ChiTaRs CSGALNACT2-CDR2 CSGALNACT2 chr10 43651145 CDR2 chr16 22357678 Exonic hg19 NA BQ637932 Out-of-frame Inter-chr q11.21 p12.2 109414 ChimerSeq ChiTaRs ChiTaRs RABGEF1-GNB1 RABGEF1 chr7 66147245 GNB1 chr1 1747239 Exonic hg19 NA DA852189 Out-of-frame Inter-chr q11.21 p36.33 109415 ChimerSeq ChiTaRs ChiTaRs MRPS25-MDC1 MRPS25 chr3 15106730 MDC1 chr6 2003508 Exonic hg19 NA DB442566 Out-of-frame Inter-chr p25.1 Tumor suppressor gene 109416 ChimerSeq ChiTaRs ChiTaRs TGFBR3-FGD3 TGFBR3 chr1 92351655 FGD3 chr9 95765205 Exonic hg19 NA BI834312 Out-of-frame Inter-chr p22.1 Tumor suppressor gene q22.31 109417 ChimerSeq ChiTaRs ChiTaRs KIF2C-LYPD6B KIF2C chr1 45225989 LYPD6B chr2 150005596 Exonic hg19 NA AU123804 Out-of-frame Inter-chr p34.1 q23.2 109418 ChimerSeq ChiTaRs ChiTaRs HNRNPH1-HNRNPH1 HNRNPH1 chr5 179041790 HNRNPH1 chr5 179046322 Exonic hg19 NA AI989461 Out-of-frame Intra-chr q35.3 q35.3 109419 ChimerSeq ChiTaRs ChiTaRs GDAP2-DUSP16 GDAP2 chr1 118412383 DUSP16 chr12 12627168 Exonic hg19 NA BE698859 Out-of-frame Inter-chr p12 109420 ChimerSeq ChiTaRs ChiTaRs ASB5-MGP ASB5 chr4 177142399 MGP chr12 15035125 Exonic hg19 NA BP317842 Out-of-frame Inter-chr q34.2 p12.3 109421 ChimerSeq ChiTaRs ChiTaRs PCGF3-STAG3L3 PCGF3 chr4 760473 STAG3L3 chr7 72448164 Exonic hg19 NA BE835063 Out-of-frame Inter-chr p16.3 q11.23 109422 ChimerSeq ChiTaRs ChiTaRs PDP1-ZNRD1-AS1 PDP1 chr8 94934596 ZNRD1-AS1 chr6 1309359 Exonic hg19 NA DB075386 Out-of-frame Inter-chr q22.1 109423 ChimerSeq ChiTaRs ChiTaRs PCBD2-GSTZ1 PCBD2 chr5 134260295 GSTZ1 chr14 77791211 Exonic hg19 NA BM820517 Out-of-frame Inter-chr q31.1 q24.3 109424 ChimerSeq ChiTaRs ChiTaRs YIPF3-FAM129A YIPF3 chr6 43479773 FAM129A chr1 184761268 Exonic hg19 NA BU623888 Out-of-frame Inter-chr p21.1 q25.3 109425 ChimerSeq ChiTaRs ChiTaRs PSMB7-SMEK1 PSMB7 chr9 127177716 SMEK1 chr14 91951992 Exonic hg19 NA DA677584 Out-of-frame Inter-chr q33.3 109426 ChimerSeq ChiTaRs ChiTaRs WARS2-LOXL2 WARS2 chr1 119683276 LOXL2 chr8 23190983 Exonic hg19 NA DA579087 Out-of-frame Inter-chr p12 p21.3 109427 ChimerSeq ChiTaRs ChiTaRs AKAP9-AKAP9 AKAP9 chr7 91726102 AKAP9 chr7 91732281 Exonic hg19 NA BM685013 Out-of-frame Intra-chr q21.2 Oncogene q21.2 Oncogene 109428 ChimerSeq ChiTaRs ChiTaRs EEF1A1-IFT74 EEF1A1 chr6 74229652 IFT74 chr9 27056333 Exonic hg19 NA BG113553 Out-of-frame Inter-chr q13 Tumor suppressor gene p21.2 109429 ChimerSeq ChiTaRs ChiTaRs GPC3-PDGFRA GPC3 chrX 132669971 PDGFRA chr4 55163307 Exonic hg19 NA AI468457 Out-of-frame Inter-chr q26.2 Tumor suppressor gene q12 Oncogene 109430 ChimerSeq ChiTaRs ChiTaRs EPAS1-SMARCD3 EPAS1 chr2 46613836 SMARCD3 chr7 150936172 Exonic hg19 NA CA427258 Out-of-frame Inter-chr p21 Tumor suppressor gene Transcription factor q36.1 109431 ChimerSeq ChiTaRs ChiTaRs DAAM2-CCDC80 DAAM2 chr6 39847030 CCDC80 chr3 112324113 Exonic hg19 NA AX747160 Out-of-frame Inter-chr p21.2 q13.2 109432 ChimerSeq ChiTaRs ChiTaRs IFT57-ESRRB IFT57 chr3 107938313 ESRRB chr14 76837724 Exonic hg19 NA AF094517 Out-of-frame Inter-chr q13.13 q24.3 Tumor suppressor gene Transcription factor 109433 ChimerSeq ChiTaRs ChiTaRs MCM6-NBAS MCM6 chr2 136633993 NBAS chr2 15475831 Exonic hg19 NA BP228918 Out-of-frame Intra-chr q21.3 p24.3 109434 ChimerSeq ChiTaRs ChiTaRs GALNT14-GALNT14 GALNT14 chr2 31133529 GALNT14 chr2 31133502 Exonic hg19 NA BU676719 Out-of-frame Intra-chr p23.1 p23.1 109435 ChimerSeq ChiTaRs ChiTaRs UBR4-MICAL1 UBR4 chr1 19412694 MICAL1 chr6 109767442 Exonic hg19 NA BE836987 Out-of-frame Inter-chr p36.13 q21 109436 ChimerSeq ChiTaRs ChiTaRs UBE2D3-KIAA1598 UBE2D3 chr4 103718175 KIAA1598 chr10 118644526 Exonic hg19 NA BI055059 Out-of-frame Inter-chr q24 109437 ChimerSeq ChiTaRs ChiTaRs TERF1-MLEC TERF1 chr8 73958665 MLEC chr12 121135412 Exonic hg19 NA AI825089 Out-of-frame Inter-chr q21.11 Transcription factor q24.31 109438 ChimerSeq ChiTaRs ChiTaRs FAM5C-NARS FAM5C chr1 190169936 NARS chr18 55273863 Exonic hg19 NA BP424521 Out-of-frame Inter-chr q21.31 109439 ChimerSeq ChiTaRs ChiTaRs FN1-YWHAG FN1 chr2 216243977 YWHAG chr7 75956111 Exonic hg19 NA T95736 Out-of-frame Inter-chr q35 Oncogene q11.23 109440 ChimerSeq ChiTaRs ChiTaRs HNRNPA2B1-INS-IGF2 HNRNPA2B1 chr7 26240365 INS-IGF2 chr11 2150347 Exonic hg19 NA CB218604 Out-of-frame Inter-chr p15.2 p15.5 109441 ChimerSeq ChiTaRs ChiTaRs MAP4-TNNC2 MAP4 chr3 47957612 TNNC2 chr20 44451853 Exonic hg19 NA BX649077 Out-of-frame Inter-chr p21.31 q13.12 109442 ChimerSeq ChiTaRs ChiTaRs HCFC1-VGLL1 HCFC1 chrX 153222089 VGLL1 chrX 135638667 Exonic hg19 NA H12693 Out-of-frame Intra-chr q28 q26.3 109443 ChimerSeq ChiTaRs ChiTaRs ZNF736-SLC25A13 ZNF736 chr7 63774531 SLC25A13 chr7 95820517 Exonic hg19 NA DA535064 In-Frame Intra-chr q11.21 Transcription factor q21.3 109444 ChimerSeq ChiTaRs ChiTaRs CENPC1-PAICS CENPC1 chr4 68411262 PAICS chr4 57325536 Exonic hg19 NA DC389672 Out-of-frame Intra-chr q12 109445 ChimerSeq ChiTaRs ChiTaRs KAT6B-GCNT1 KAT6B chr10 76786654 GCNT1 chr9 79042644 Exonic hg19 NA AJ299263 Out-of-frame Inter-chr Oncogene q21.13 109446 ChimerSeq ChiTaRs ChiTaRs RAB7A-CISD2 RAB7A chr3 128532942 CISD2 chr4 103809009 Exonic hg19 NA BU617059 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q24 109447 ChimerSeq ChiTaRs ChiTaRs DPH5-ARSD DPH5 chr1 101491309 ARSD chrX 2822945 Exonic hg19 NA BC003660 Out-of-frame Inter-chr p21.2 p22.33 109448 ChimerSeq ChiTaRs ChiTaRs BCYRN1-DYNC1I2 BCYRN1 chrX 70757884 DYNC1I2 chr2 172604408 Exonic hg19 NA BF989407 Out-of-frame Inter-chr p21 q31.1 109449 ChimerSeq ChiTaRs ChiTaRs FBLIM1-AKIP1 FBLIM1 chr1 16111540 AKIP1 chr11 8941455 Exonic hg19 NA BP419192 Out-of-frame Inter-chr p36.21 p15.4 109450 ChimerSeq ChiTaRs ChiTaRs LIN54-GDE1 LIN54 chr4 83893321 GDE1 chr16 19513707 Exonic hg19 NA AW881269 Out-of-frame Inter-chr q21.22 Transcription factor p12.3 109451 ChimerSeq ChiTaRs ChiTaRs LYST-SFTPB LYST chr1 236030175 SFTPB chr2 85885378 Exonic hg19 NA BC020793 Out-of-frame Inter-chr q42.3 p11.2 109452 ChimerSeq ChiTaRs ChiTaRs SERPINB6-BASP1 SERPINB6 chr6 2955788 BASP1 chr5 17276223 Exonic hg19 NA CN361372 Out-of-frame Inter-chr p25.2 p15.1 Tumor suppressor gene 109453 ChimerSeq ChiTaRs ChiTaRs SMAP2-RPS24 SMAP2 chr1 40882755 RPS24 chr10 79800389 Exonic hg19 NA BG287995 Out-of-frame Inter-chr p34.2 q22.3 109454 ChimerSeq ChiTaRs ChiTaRs HEATR5B-MRPL27 HEATR5B chr2 37227310 MRPL27 chr17 48445345 Exonic hg19 NA BF665678 Out-of-frame Inter-chr p22.2 q21.33 109455 ChimerSeq ChiTaRs ChiTaRs ZNF786-PRKAG2 ZNF786 chr7 148787785 PRKAG2 chr7 151292481 Exonic hg19 NA DB486204 Out-of-frame Intra-chr q36.1 Transcription factor q36.1 109456 ChimerSeq ChiTaRs ChiTaRs MYOT-BOLA2 MYOT chr5 137090042 BOLA2 chr16 29870348 Exonic hg19 NA AK310988 Out-of-frame Inter-chr q31.2 p11.2 109457 ChimerSeq ChiTaRs ChiTaRs DEK-CD164 DEK chr6 18249967 CD164 chr6 109688885 Exonic hg19 NA BM752335 Out-of-frame Intra-chr p22.3 Oncogene q21 109458 ChimerSeq ChiTaRs ChiTaRs ANP32E-EDEM1 ANP32E chr1 150208460 EDEM1 chr3 5259631 Exonic hg19 NA BX487661 Out-of-frame Inter-chr q21.2 p26.1 109459 ChimerSeq ChiTaRs ChiTaRs C11orf58-AGBL4 C11orf58 chr11 16776534 AGBL4 chr1 49982558 Exonic hg19 NA BE088725 Out-of-frame Inter-chr p15.2 p33 109460 ChimerSeq ChiTaRs ChiTaRs GPM6A-BRWD1 GPM6A chr4 176923571 BRWD1 chr21 40669383 Exonic hg19 NA DA209219 Out-of-frame Inter-chr q34.2 q22.2 109461 ChimerSeq ChiTaRs ChiTaRs TMEM222-TMEM97 TMEM222 chr1 27661957 TMEM97 chr17 26653611 Exonic hg19 NA BM016316 Out-of-frame Inter-chr p36.11 q11.2 109462 ChimerSeq ChiTaRs ChiTaRs PDIA6-TPM2 PDIA6 chr2 10933321 TPM2 chr9 35685308 Exonic hg19 NA BE910365 Out-of-frame Inter-chr p25.1 p13.3 109463 ChimerSeq ChiTaRs ChiTaRs TRPS1-WWC3 TRPS1 chr8 116599597 WWC3 chrX 10058810 Exonic hg19 NA CF138660 Out-of-frame Inter-chr q23.3 Transcription factor p22.2 109464 ChimerSeq ChiTaRs ChiTaRs ALDH18A1-CALCOCO2 ALDH18A1 chr10 97366399 CALCOCO2 chr17 46937745 Exonic hg19 NA EY198528 Out-of-frame Inter-chr q24.1 q21.32 109465 ChimerSeq ChiTaRs ChiTaRs WDR74-LILRB3 WDR74 chr11 62609281 LILRB3 chr19 54726220 Exonic hg19 NA DA670599 Out-of-frame Inter-chr q12.3 109466 ChimerSeq ChiTaRs ChiTaRs INA-HSPA9 INA chr10 105049874 HSPA9 chr5 137891576 Exonic hg19 NA BM722787 Out-of-frame Inter-chr q24.33 q31.2 109467 ChimerSeq ChiTaRs ChiTaRs PNMA5-PPP1R18 PNMA5 chrX 152159764 PPP1R18 chr6 1976470 Exonic hg19 NA BX390177 Out-of-frame Inter-chr q28 p21.33 109468 ChimerSeq ChiTaRs ChiTaRs PRG2-SERINC3 PRG2 chr11 57158120 SERINC3 chr20 43126086 Exonic hg19 NA BG572858 Out-of-frame Inter-chr q12.1 q13.12 109469 ChimerSeq ChiTaRs ChiTaRs AHNAK-DLC1 AHNAK chr11 62283808 DLC1 chr8 12941409 Exonic hg19 NA CB999461 Out-of-frame Inter-chr q12.3 Tumor suppressor gene p22 Tumor suppressor gene 109470 ChimerSeq ChiTaRs ChiTaRs ATG13-MYO15B ATG13 chr11 46694853 MYO15B chr17 73608897 Exonic hg19 NA AA345253 Out-of-frame Inter-chr p11.2 q25.1 109471 ChimerSeq ChiTaRs ChiTaRs HIST1H1D-METTL23 HIST1H1D chr6 26235112 METTL23 chr17 74722934 Exonic hg19 NA DA571038 Out-of-frame Inter-chr p22.2 q25.1 109472 ChimerSeq ChiTaRs ChiTaRs NUDT16-PARG NUDT16 chr3 131101162 PARG chr10 51314430 Exonic hg19 NA DA697471 Out-of-frame Inter-chr q22.1 q11.23 109473 ChimerSeq ChiTaRs ChiTaRs GAS5-TNFRSF1A GAS5 chr1 173834558 TNFRSF1A chr12 6442667 Exonic hg19 NA DA583056 Out-of-frame Inter-chr q25.1 Tumor suppressor gene p13.31 109474 ChimerSeq ChiTaRs ChiTaRs PALLD-FAM198B PALLD chr4 169753322 FAM198B chr4 159048552 Exonic hg19 NA BG700758 5'UTR-3'UTR Intra-chr q32.3 q32.1 109475 ChimerSeq ChiTaRs ChiTaRs ADCK5-SPIRE1 ADCK5 chr8 145608431 SPIRE1 chr18 12449841 Exonic hg19 NA DA323765 In-Frame Inter-chr q24.3 Atypical:ABC1 p11.21 109476 ChimerSeq ChiTaRs ChiTaRs NDUFS5-GRAMD1A NDUFS5 chr1 39500129 GRAMD1A chr19 35504249 Exonic hg19 NA CN429294 Out-of-frame Inter-chr p34.3 q13.11 109477 ChimerSeq ChiTaRs ChiTaRs PRKCI-CCDC88B PRKCI chr3 169977847 CCDC88B chr11 64110650 Exonic hg19 NA CN412349 Out-of-frame Inter-chr q26.2 q13.1 109478 ChimerSeq ChiTaRs ChiTaRs DDX39B-PLEKHB1 DDX39B chr6 2839755 PLEKHB1 chr11 73358728 Exonic hg19 NA DA270342 Out-of-frame Inter-chr q13.4 109479 ChimerSeq ChiTaRs ChiTaRs MAGT1-UGDH MAGT1 chrX 77083514 UGDH chr4 39501054 Exonic hg19 NA BF573050 Out-of-frame Inter-chr q21.1 p14 109480 ChimerSeq ChiTaRs ChiTaRs RIC8A-ORM1 RIC8A chr11 215113 ORM1 chr9 117092741 Exonic hg19 NA AV718491 Out-of-frame Inter-chr p15.5 q32 109481 ChimerSeq ChiTaRs ChiTaRs ANP32B-MIR548H3 ANP32B chr9 100778093 MIR548H3 chr6 97591129 Exonic hg19 NA CA417969 Out-of-frame Inter-chr q22.33 p12 109482 ChimerSeq ChiTaRs ChiTaRs NRXN1-TTYH1 NRXN1 chr2 51259252 TTYH1 chr19 54926798 Exonic hg19 NA BI754520 Out-of-frame Inter-chr p16.3 109483 ChimerSeq ChiTaRs ChiTaRs CDC20B-ARPC2 CDC20B chr5 54460030 ARPC2 chr2 219118836 Exonic hg19 NA AU119597 Out-of-frame Inter-chr q11.2 q35 109484 ChimerSeq ChiTaRs ChiTaRs RABGGTB-PCLO RABGGTB chr1 76260496 PCLO chr7 82785182 Exonic hg19 NA Y08201 Out-of-frame Inter-chr p31.1 q21.11 109485 ChimerSeq ChiTaRs ChiTaRs STEAP4-CTNND1 STEAP4 chr7 87912485 CTNND1 chr11 57569332 Exonic hg19 NA BF987948 Out-of-frame Inter-chr q21.12 q12.1 Tumor suppressor gene 109486 ChimerSeq ChiTaRs ChiTaRs KIDINS220-COL15A1 KIDINS220 chr2 8877332 COL15A1 chr9 101816906 Exonic hg19 NA BI059302 Out-of-frame Inter-chr p25.1 q22.33 109487 ChimerSeq ChiTaRs ChiTaRs AGER-SFTPA2 AGER chr6 3496582 SFTPA2 chr10 81315815 Exonic hg19 NA CA435533 Out-of-frame Inter-chr q22.3 109488 ChimerSeq ChiTaRs ChiTaRs CLCN2-CIAO1 CLCN2 chr3 184076920 CIAO1 chr2 96937163 Exonic hg19 NA AA454162 Out-of-frame Inter-chr q27.1 q11.2 109489 ChimerSeq ChiTaRs ChiTaRs PPIG-ARHGAP12 PPIG chr2 170488381 ARHGAP12 chr10 32136041 Exonic hg19 NA BG010044 Out-of-frame Inter-chr q31.1 p11.22 109490 ChimerSeq ChiTaRs ChiTaRs CDK5RAP2-TMOD1 CDK5RAP2 chr9 123342430 TMOD1 chr9 100328174 Exonic hg19 NA BG700839 Out-of-frame Intra-chr q33.2 q22.33 109491 ChimerSeq ChiTaRs ChiTaRs LYAR-COL6A3 LYAR chr4 4283622 COL6A3 chr2 238275370 Exonic hg19 NA BU616556 Out-of-frame Inter-chr p16.3 q37.3 109492 ChimerSeq ChiTaRs ChiTaRs NASP-IGFBP5 NASP chr1 46083919 IGFBP5 chr2 217538895 Exonic hg19 NA AI278389 Out-of-frame Inter-chr p34.1 q35 Tumor suppressor gene 109493 ChimerSeq ChiTaRs ChiTaRs PRRG1-TSPAN7 PRRG1 chrX 37285253 TSPAN7 chrX 38525375 Exonic hg19 NA DC411619 In-Frame Intra-chr p21.1 p11.4 KB 109494 ChimerSeq ChiTaRs ChiTaRs CUL1-LYZ CUL1 chr7 148454157 LYZ chr12 69742161 Exonic hg19 NA BP294789 Out-of-frame Inter-chr q36.1 Tumor suppressor gene q15 109495 ChimerSeq ChiTaRs ChiTaRs KIAA0907-MBP KIAA0907 chr1 155885295 MBP chr18 74691826 Exonic hg19 NA BP328028 Out-of-frame Inter-chr q22 q23 109496 ChimerSeq ChiTaRs ChiTaRs TPM2-TPM3 TPM2 chr9 35689223 TPM3 chr1 154145384 Exonic hg19 NA F00784 Out-of-frame Inter-chr p13.3 q21.3 109497 ChimerSeq ChiTaRs ChiTaRs DSE-LOC100130987 DSE chr6 116758246 LOC100130987 chr11 67120879 Exonic hg19 NA BQ028298 Out-of-frame Inter-chr q22.1 109498 ChimerSeq ChiTaRs ChiTaRs HAUS6-SLC39A8 HAUS6 chr9 19063722 SLC39A8 chr4 103188711 Exonic hg19 NA CB128514 Out-of-frame Inter-chr p22.1 q24 109499 ChimerSeq ChiTaRs ChiTaRs CA8-CORO2B CA8 chr8 61193954 CORO2B chr15 68987546 Exonic hg19 NA DA070111 5'UTR-CDS Inter-chr q12.1 q23 109500 ChimerSeq ChiTaRs ChiTaRs ACTB-RPS16 ACTB chr7 5570201 RPS16 chr19 39923872 Exonic hg19 NA BE732178 Out-of-frame Inter-chr p22.1 q13.2 109501 ChimerSeq ChiTaRs ChiTaRs RBM3-SIKE1 RBM3 chrX 48436672 SIKE1 chr1 115313470 Exonic hg19 NA AA465493 Out-of-frame Inter-chr p11.23 p13.2 109502 ChimerSeq ChiTaRs ChiTaRs SET-RPS3 SET chr9 131457000 RPS3 chr11 75115861 Exonic hg19 NA BG028694 Out-of-frame Inter-chr q34.11 q13.4 109503 ChimerSeq ChiTaRs ChiTaRs SH3BGRL-JAK1 SH3BGRL chrX 80457745 JAK1 chr1 65332611 Exonic hg19 NA BJ990812 Out-of-frame Inter-chr q21.1 p31.3 TK:JakA Oncogene 109504 ChimerSeq ChiTaRs ChiTaRs FAM120A-MT2A FAM120A chr9 96261159 MT2A chr16 56642493 Exonic hg19 NA BU534183 Out-of-frame Inter-chr q22.31 q13 Tumor suppressor gene 109505 ChimerSeq ChiTaRs ChiTaRs SNX18-SNX18 SNX18 chr5 53841192 SNX18 chr5 53840921 Exonic hg19 NA AA721713 Out-of-frame Intra-chr q11.2 q11.2 109506 ChimerSeq ChiTaRs ChiTaRs S100A6-PRPF8 S100A6 chr1 153508468 PRPF8 chr17 1582111 Exonic hg19 NA AU134329 Out-of-frame Inter-chr q21.3 109507 ChimerSeq ChiTaRs ChiTaRs CCZ1B-EIF3L CCZ1B chr7 6838807 EIF3L chr22 38245425 Exonic hg19 NA CB149589 Out-of-frame Inter-chr p22.1 q13.1 109508 ChimerSeq ChiTaRs ChiTaRs LRRC40-ACAD11 LRRC40 chr1 70641005 ACAD11 chr3 132316124 Exonic hg19 NA DA565124 Out-of-frame Inter-chr p31.1 q22.1 109509 ChimerSeq ChiTaRs ChiTaRs SNHG1-GDI1 SNHG1 chr11 62621435 GDI1 chrX 153665511 Exonic hg19 NA DA285383 Out-of-frame Inter-chr q12.3 q28 109510 ChimerSeq ChiTaRs ChiTaRs NDRG1-SLC25A3 NDRG1 chr8 134249843 SLC25A3 chr12 98987449 Exonic hg19 NA BE315098 Out-of-frame Inter-chr q24.22 Tumor suppressor gene q23.1 109511 ChimerSeq ChiTaRs ChiTaRs IBTK-DDX18 IBTK chr6 82957440 DDX18 chr2 118575082 Exonic hg19 NA DA722364 Out-of-frame Inter-chr q14.1 109512 ChimerSeq ChiTaRs ChiTaRs DUSP1-ST5 DUSP1 chr5 172198196 ST5 chr11 8752289 Exonic hg19 NA DB221166 Out-of-frame Inter-chr q35.1 Tumor suppressor gene p15.4 Tumor suppressor gene 109513 ChimerSeq ChiTaRs ChiTaRs JUN-GMPR2 JUN chr1 59248045 GMPR2 chr14 24708184 Exonic hg19 NA BF916399 Out-of-frame Inter-chr p32.1 Oncogene Transcription factor q12 109514 ChimerSeq ChiTaRs ChiTaRs SYN1-DUSP3 SYN1 chrX 47446188 DUSP3 chr17 41846479 Exonic hg19 NA CD743038 Out-of-frame Inter-chr p11.23 q21.31 109515 ChimerSeq ChiTaRs ChiTaRs HIST1H1D-HSPA8 HIST1H1D chr6 26235192 HSPA8 chr11 122928205 Exonic hg19 NA BC112920 Out-of-frame Inter-chr p22.2 q24.1 109516 ChimerSeq ChiTaRs ChiTaRs CALML3-GAS8 CALML3 chr10 5567635 GAS8 chr16 90110929 Exonic hg19 NA BX507087 Out-of-frame Inter-chr p15.1 q24.3 109517 ChimerSeq ChiTaRs ChiTaRs WASF2-KHDRBS1 WASF2 chr1 27816567 KHDRBS1 chr1 32495896 Exonic hg19 NA DB021997 Out-of-frame Intra-chr p36.11 p35.2 109518 ChimerSeq ChiTaRs ChiTaRs LAPTM5-POR LAPTM5 chr1 31206536 POR chr7 75601750 Exonic hg19 NA BF001401 Out-of-frame Inter-chr p35.2 q11.23 109519 ChimerSeq ChiTaRs ChiTaRs FARP2-SMARCC1 FARP2 chr2 242383566 SMARCC1 chr3 47663704 Exonic hg19 NA AW935056 Out-of-frame Inter-chr q37.3 p21.31 Tumor suppressor gene 109520 ChimerSeq ChiTaRs ChiTaRs RAP1A-EIF4A3 RAP1A chr1 112162535 EIF4A3 chr17 78113865 Exonic hg19 NA CR997446 Out-of-frame Inter-chr p13.2 Tumor suppressor gene q25.3 109521 ChimerSeq ChiTaRs ChiTaRs LCN1-LYZ LCN1 chr9 138414015 LYZ chr12 69746005 Exonic hg19 NA CK429413 Out-of-frame Inter-chr q34.3 q15 109522 ChimerSeq ChiTaRs ChiTaRs CLDN1-PARD3 CLDN1 chr3 190025563 PARD3 chr10 35084174 Exonic hg19 NA BQ022914 Out-of-frame Inter-chr q28 Tumor suppressor gene p11.21 109523 ChimerSeq ChiTaRs ChiTaRs ZNHIT1-DPF2 ZNHIT1 chr7 100867343 DPF2 chr11 65116353 Exonic hg19 NA BM916367 Out-of-frame Inter-chr q22.1 q13.1 109524 ChimerSeq ChiTaRs ChiTaRs C7orf73-AP2M1 C7orf73 chr7 135359196 AP2M1 chr3 183896766 Exonic hg19 NA CB529923 Out-of-frame Inter-chr q33 q27.1 109525 ChimerSeq ChiTaRs ChiTaRs LYRM2-KIAA1467 LYRM2 chr6 90346854 KIAA1467 chr12 13235155 Exonic hg19 NA BF093584 Out-of-frame Inter-chr q15 109526 ChimerSeq ChiTaRs ChiTaRs VWA7-PPP1R13B VWA7 chr6 3075861 PPP1R13B chr14 104200089 Exonic hg19 NA AK098390 Out-of-frame Inter-chr q32.33 109527 ChimerSeq ChiTaRs ChiTaRs RHOB-UBE2D3 RHOB chr2 20649110 UBE2D3 chr4 103718434 Exonic hg19 NA AI126264 Out-of-frame Inter-chr p24.1 Tumor suppressor gene q24 109528 ChimerSeq ChiTaRs ChiTaRs TXNDC5-PXK TXNDC5 chr6 7894980 PXK chr3 58377499 Exonic hg19 NA AW290957 Out-of-frame Inter-chr p24.3 p14.3 109529 ChimerSeq ChiTaRs ChiTaRs LINC00476-RAD51AP1 LINC00476 chr9 98603652 RAD51AP1 chr12 4653004 Exonic hg19 NA BE927719 Out-of-frame Inter-chr q22.32 p13.32 109530 ChimerSeq ChiTaRs ChiTaRs CIAO1-TRAPPC9 CIAO1 chr2 96936889 TRAPPC9 chr8 140877325 Exonic hg19 NA BF742208 Out-of-frame Inter-chr q11.2 q24.3 109531 ChimerSeq ChiTaRs ChiTaRs WDR47-CCDC180 WDR47 chr1 109535958 CCDC180 chr9 100088874 Exonic hg19 NA AI923779 Out-of-frame Inter-chr p13.3 q22.33 109532 ChimerSeq ChiTaRs ChiTaRs PTGDS-DIP2C PTGDS chr9 139874447 DIP2C chr10 709466 Exonic hg19 NA DA262936 Out-of-frame Inter-chr q34.3 p15.3 109533 ChimerSeq ChiTaRs ChiTaRs PPIF-FAM57A PPIF chr10 81115090 FAM57A chr17 645099 Exonic hg19 NA AA977293 Out-of-frame Inter-chr q22.3 p13.3 109534 ChimerSeq ChiTaRs ChiTaRs CCDC6-RAD1 CCDC6 chr10 61666308 RAD1 chr5 34915821 Exonic hg19 NA BC022284 Out-of-frame Inter-chr q21.2 p13.2 109535 ChimerSeq ChiTaRs ChiTaRs PHF6-STX12 PHF6 chrX 133562282 STX12 chr1 28149488 Exonic hg19 NA AK025497 Out-of-frame Inter-chr q26.2 Oncogene Tumor suppressor gene p35.3 109536 ChimerSeq ChiTaRs ChiTaRs EZH2-RUFY2 EZH2 chr7 148504703 RUFY2 chr10 70136641 Exonic hg19 NA CA417159 Out-of-frame Inter-chr q36.1 Oncogene Tumor suppressor gene q21.3 109537 ChimerSeq ChiTaRs ChiTaRs BSCL2-SENP5 BSCL2 chr11 62457800 SENP5 chr3 196658069 Exonic hg19 NA BF055091 Out-of-frame Inter-chr q12.3 q29 109538 ChimerSeq ChiTaRs ChiTaRs PABPC1-VCP PABPC1 chr8 101715249 VCP chr9 35057416 Exonic hg19 NA BE612624 Out-of-frame Inter-chr q22.3 p13.3 109539 ChimerSeq ChiTaRs ChiTaRs ADCY2-RNF19B ADCY2 chr1 152006276 RNF19B chr1 33413832 Exonic hg19 NA CA309448 Out-of-frame Intra-chr p15.31 p35.1 109540 ChimerSeq ChiTaRs ChiTaRs RBM10-PAPD4 RBM10 chrX 47004776 PAPD4 chr5 78908441 Exonic hg19 NA BI909496 Out-of-frame Inter-chr p11.3 q14.1 109541 ChimerSeq ChiTaRs ChiTaRs RIF1-IFT80 RIF1 chr2 152322324 IFT80 chr3 160119856 Exonic hg19 NA BQ441248 Out-of-frame Inter-chr q23.3 q25.33 109542 ChimerSeq ChiTaRs ChiTaRs ESPN-DDX39B ESPN chr1 6505826 DDX39B chr6 2828821 Exonic hg19 NA AL834172 Out-of-frame Inter-chr p36.31 109543 ChimerSeq ChiTaRs ChiTaRs GDI2-GRAMD1C GDI2 chr10 5808603 GRAMD1C chr3 113601608 Exonic hg19 NA AW390850 Out-of-frame Inter-chr p15.1 q13.31 109544 ChimerSeq ChiTaRs ChiTaRs TMEM14B-CUX1 TMEM14B chr6 10749478 CUX1 chr7 101900466 Exonic hg19 NA AV750827 Out-of-frame Inter-chr p24.2 q22.1 Tumor suppressor gene Transcription factor 109545 ChimerSeq ChiTaRs ChiTaRs TMEM150A-CAPN10 TMEM150A chr2 85825929 CAPN10 chr2 241537314 Exonic hg19 NA AW593365 Out-of-frame Intra-chr p11.2 q37.3 109546 ChimerSeq ChiTaRs ChiTaRs EPB41L5-SGMS1 EPB41L5 chr2 120885494 SGMS1 chr10 52195666 Exonic hg19 NA BF836346 Out-of-frame Inter-chr q14.2 q11.23 Tumor suppressor gene 109547 ChimerSeq ChiTaRs ChiTaRs MDH1-CTNNA1 MDH1 chr2 63816146 CTNNA1 chr5 138269887 Exonic hg19 NA CK003575 Out-of-frame Inter-chr p15 q31.2 Oncogene 109548 ChimerSeq ChiTaRs ChiTaRs ZNF251-CTSF ZNF251 chr8 145980874 CTSF chr11 66333792 Exonic hg19 NA DA075766 Out-of-frame Inter-chr Transcription factor q13.2 109549 ChimerSeq ChiTaRs ChiTaRs TMEM57-KAT6B TMEM57 chr1 25793487 KAT6B chr10 76785513 Exonic hg19 NA AJ299264 Out-of-frame Inter-chr p36.11 Oncogene 109550 ChimerSeq ChiTaRs ChiTaRs ZNF638-COL9A1 ZNF638 chr2 71662186 COL9A1 chr6 70925993 Exonic hg19 NA DV460377 Out-of-frame Inter-chr p13.3 q13 109551 ChimerSeq ChiTaRs ChiTaRs MEMO1-CORIN MEMO1 chr2 32264867 CORIN chr4 47808876 Exonic hg19 NA CN274312 Out-of-frame Inter-chr p22.3 p12 109552 ChimerSeq ChiTaRs ChiTaRs SBDS-POLE3 SBDS chr7 66459228 POLE3 chr9 116170993 Exonic hg19 NA BF772219 Out-of-frame Inter-chr q11.21 Oncogene q32 109553 ChimerSeq ChiTaRs ChiTaRs RPL37A-EIF4A1 RPL37A chr2 217366184 EIF4A1 chr17 7477605 Exonic hg19 NA CD049225 Out-of-frame Inter-chr q35 p13.1 109554 ChimerSeq ChiTaRs ChiTaRs ZNF691-GNS ZNF691 chr1 43316740 GNS chr12 65108835 Exonic hg19 NA DB469756 Out-of-frame Inter-chr p34.2 Transcription factor q14.3 109555 ChimerSeq ChiTaRs ChiTaRs PTPN14-NLRP11 PTPN14 chr1 214650732 NLRP11 chr19 56296885 Exonic hg19 NA BG685962 Out-of-frame Inter-chr q41 q13.43 109556 ChimerSeq ChiTaRs ChiTaRs H2AFZ-RBPMS2 H2AFZ chr4 100871411 RBPMS2 chr15 65041648 Exonic hg19 NA CN273387 Out-of-frame Inter-chr q23 q22.31 109557 ChimerSeq ChiTaRs ChiTaRs DAG1-SLC35F2 DAG1 chr3 49573022 SLC35F2 chr11 107686639 Exonic hg19 NA AI950189 Out-of-frame Inter-chr p21.31 q22.3 109558 ChimerSeq ChiTaRs ChiTaRs SAA2-SAA4-TXNL4B SAA2-SAA4 chr11 18270182 TXNL4B chr16 72094767 Exonic hg19 NA BG564592 Out-of-frame Inter-chr p15.1 Tumor suppressor gene q22.2 109559 ChimerSeq ChiTaRs ChiTaRs BPHL-MFSD9 BPHL chr6 3153296 MFSD9 chr2 103334117 Exonic hg19 NA AW082286 Out-of-frame Inter-chr p25.2 q12.1 109560 ChimerSeq ChiTaRs ChiTaRs SYN1-ADAMTS2 SYN1 chrX 47442862 ADAMTS2 chr5 178581638 Exonic hg19 NA DB258055 Out-of-frame Inter-chr p11.23 109561 ChimerSeq ChiTaRs ChiTaRs PIK3C2A-CNN2 PIK3C2A chr11 17110344 CNN2 chr19 1038327 Exonic hg19 NA BM461728 Out-of-frame Inter-chr p15.1 p13.3 109562 ChimerSeq ChiTaRs ChiTaRs CERS6-TXNIP CERS6 chr2 169629307 TXNIP chr1 145440113 Exonic hg19 NA AW601963 Out-of-frame Inter-chr q24.3 q21.1 Tumor suppressor gene 109563 ChimerSeq ChiTaRs ChiTaRs CA14-SSNA1 CA14 chr1 150230452 SSNA1 chr9 140084464 Exonic hg19 NA AA094140 Out-of-frame Inter-chr q21.2 q34.3 109564 ChimerSeq ChiTaRs ChiTaRs RBM47-ATP1A1 RBM47 chr4 40553636 ATP1A1 chr1 116943603 Exonic hg19 NA AI986298 Out-of-frame Inter-chr p14 p13.1 109565 ChimerSeq ChiTaRs ChiTaRs WDR74-IMMP2L WDR74 chr11 62609281 IMMP2L chr7 110731176 Exonic hg19 NA DA803440 Out-of-frame Inter-chr q12.3 q31.1 109566 ChimerSeq ChiTaRs ChiTaRs AKIRIN1-RAB21 AKIRIN1 chr1 39470659 RAB21 chr12 72179963 Exonic hg19 NA CD358850 Out-of-frame Inter-chr p34.3 q21.1 109567 ChimerSeq ChiTaRs ChiTaRs TIAL1-PSAP TIAL1 chr10 121335222 PSAP chr10 73579553 Exonic hg19 NA CA308179 Out-of-frame Intra-chr q26.11 q22.1 109568 ChimerSeq ChiTaRs ChiTaRs OSBPL10-FOS OSBPL10 chr3 31871725 FOS chr14 75748373 Exonic hg19 NA AW939698 Out-of-frame Inter-chr p22.3 q24.3 Transcription factor 109569 ChimerSeq ChiTaRs ChiTaRs MSC-CA2 MSC chr8 72754411 CA2 chr8 86385949 Exonic hg19 NA BI042447 Out-of-frame Intra-chr q13.3 Transcription factor q21.2 109570 ChimerSeq ChiTaRs ChiTaRs EEF1D-NFKBIB EEF1D chr8 144662830 NFKBIB chr19 39398809 Exonic hg19 NA BI860302 Out-of-frame Inter-chr 109571 ChimerSeq ChiTaRs ChiTaRs CREB3L2-IKZF1 CREB3L2 chr7 137686813 IKZF1 chr7 50444230 Exonic hg19 NA DB194731 5'UTR-CDS Intra-chr q33 Transcription factor p12.2 Oncogene Tumor suppressor gene Transcription factor 109572 ChimerSeq ChiTaRs ChiTaRs LRRC16A-PNRC2 LRRC16A chr6 25388265 PNRC2 chr1 29696 Exonic hg19 NA BQ185454 Out-of-frame Inter-chr p36.11 109573 ChimerSeq ChiTaRs ChiTaRs SNHG3-ASF1B SNHG3 chr1 28834672 ASF1B chr19 14231200 Exonic hg19 NA BQ224348 5'UTR-3'UTR Inter-chr p35.3 p13.12 109574 ChimerSeq ChiTaRs ChiTaRs WDR74-LAMP2 WDR74 chr11 62609281 LAMP2 chrX 119562098 Exonic hg19 NA DA305902 Out-of-frame Inter-chr q12.3 q24 109575 ChimerSeq ChiTaRs ChiTaRs TSPAN13-PAK1IP1 TSPAN13 chr7 16823295 PAK1IP1 chr6 10695190 Exonic hg19 NA AK225516 Out-of-frame Inter-chr p21.1 Tumor suppressor gene p24.2 109576 ChimerSeq ChiTaRs ChiTaRs SCLT1-DNAJB1 SCLT1 chr4 129805591 DNAJB1 chr19 14626882 Exonic hg19 NA AW380464 Out-of-frame Inter-chr q28.2 p13.12 Tumor suppressor gene 109577 ChimerSeq ChiTaRs ChiTaRs SKI-LDHA SKI chr1 2239112 LDHA chr11 18416115 Exonic hg19 NA BC025288 Out-of-frame Inter-chr p36.33 Transcription factor p15.1 109578 ChimerSeq ChiTaRs ChiTaRs GUF1-ZNF354B GUF1 chr4 44700974 ZNF354B chr5 178309729 Exonic hg19 NA AA227903 Out-of-frame Inter-chr p12 q35.3 Transcription factor 109579 ChimerSeq ChiTaRs ChiTaRs OSTM1-CXCL16 OSTM1 chr6 108365193 CXCL16 chr17 4638603 Exonic hg19 NA DA283397 Out-of-frame Inter-chr q21 p13.2 109580 ChimerSeq ChiTaRs ChiTaRs MAT2A-CNTN2 MAT2A chr2 85770157 CNTN2 chr1 205036226 Exonic hg19 NA BP362529 Out-of-frame Inter-chr p11.2 Tumor suppressor gene q32.1 109581 ChimerSeq ChiTaRs ChiTaRs BCYRN1-YWHAG BCYRN1 chrX 70516739 YWHAG chr7 75958991 Exonic hg19 NA BQ292246 Out-of-frame Inter-chr p21 q11.23 109582 ChimerSeq ChiTaRs ChiTaRs NBPF9-HMG20B NBPF9 chr1 145039771 HMG20B chr19 3572974 Exonic hg19 NA AF370429 Out-of-frame Inter-chr q21.2 p13.3 Transcription factor 109583 ChimerSeq ChiTaRs ChiTaRs ENSA-NUTF2 ENSA chr1 150602053 NUTF2 chr16 67905115 Exonic hg19 NA BF215130 Out-of-frame Inter-chr q21.3 q22.1 109584 ChimerSeq ChiTaRs ChiTaRs SLC38A11-TANC1 SLC38A11 chr2 165778629 TANC1 chr2 160086902 Exonic hg19 NA BU619052 Out-of-frame Intra-chr q24.3 q24.2 109585 ChimerSeq ChiTaRs ChiTaRs GNGT1-GLG1 GNGT1 chr7 93516607 GLG1 chr16 74514224 Exonic hg19 NA BF986197 Out-of-frame Inter-chr q21.3 q23.1 109586 ChimerSeq ChiTaRs ChiTaRs RNPC3-TTC37 RNPC3 chr1 104097923 TTC37 chr5 94860167 Exonic hg19 NA AI174360 Out-of-frame Inter-chr p21.1 q15 109587 ChimerSeq ChiTaRs ChiTaRs HLA-DRB1-ARIH2 HLA-DRB1 chr6 4010112 ARIH2 chr3 48982569 Exonic hg19 NA BM919617 Out-of-frame Inter-chr p21.32 p21.31 109588 ChimerSeq ChiTaRs ChiTaRs ARRDC1-CTNNA1 ARRDC1 chr9 140513072 CTNNA1 chr5 138147941 Exonic hg19 NA AK308882 Out-of-frame Inter-chr q34.3 q31.2 Oncogene 109589 ChimerSeq ChiTaRs ChiTaRs ZFYVE27-LOC100507412 ZFYVE27 chr10 99504573 LOC100507412 chr? 109517 Exonic hg19 NA BP320379 Out-of-frame Inter-chr q24.2 109590 ChimerSeq ChiTaRs ChiTaRs SERINC2-ACY1 SERINC2 chr1 31907521 ACY1 chr3 52020620 Exonic hg19 NA BM924335 3'UTR-CDS Inter-chr p35.2 p21.2 Tumor suppressor gene 109591 ChimerSeq ChiTaRs ChiTaRs GUK1-ARFGAP1 GUK1 chr1 228333769 ARFGAP1 chr20 61916216 Exonic hg19 NA BM827801 Out-of-frame Inter-chr q42.13 q13.33 109592 ChimerSeq ChiTaRs ChiTaRs TMEM181-SMARCA2 TMEM181 chr6 159055150 SMARCA2 chr9 2029019 Exonic hg19 NA D26155 Out-of-frame Inter-chr q25.3 p24.3 Tumor suppressor gene 109593 ChimerSeq ChiTaRs ChiTaRs FN1-YIPF4 FN1 chr2 216259338 YIPF4 chr2 32503048 Exonic hg19 NA BG423866 Out-of-frame Intra-chr q35 Oncogene p22.3 109594 ChimerSeq ChiTaRs ChiTaRs ADAM29-PEG10 ADAM29 chr4 175898962 PEG10 chr7 94295024 Exonic hg19 NA AF171931 Out-of-frame Inter-chr q34.1 q21.3 109595 ChimerSeq ChiTaRs ChiTaRs SORBS1-IMMP2L SORBS1 chr10 97141505 IMMP2L chr7 111035298 Exonic hg19 NA AA368148 Out-of-frame Inter-chr q24.1 q31.1 109596 ChimerSeq ChiTaRs ChiTaRs RNU5F-1-C6orf62 RNU5F-1 chr1 220215552 C6orf62 chr6 24718958 Exonic hg19 NA DA658377 Out-of-frame Inter-chr p34.1 p22.3 109597 ChimerSeq ChiTaRs ChiTaRs WDR41-HMGCR WDR41 chr5 76788045 HMGCR chr5 74647342 Exonic hg19 NA DB238220 Out-of-frame Intra-chr q14.1 q13.3 109598 ChimerSeq ChiTaRs ChiTaRs DHX29-SVIL DHX29 chr5 54579398 SVIL chr10 29926345 Exonic hg19 NA BQ310859 Out-of-frame Inter-chr q11.2 p11.23 109599 ChimerSeq ChiTaRs ChiTaRs MSN-CNST MSN chrX 64961793 CNST chr1 246831163 Exonic hg19 NA AI864511 3'UTR-3'UTR Inter-chr q12 q44 109600 ChimerSeq ChiTaRs ChiTaRs FGD5-MRPL36 FGD5 chr3 14930437 MRPL36 chr5 1798620 Exonic hg19 NA H26225 Out-of-frame Inter-chr p25.1 p15.33 109601 ChimerSeq ChiTaRs ChiTaRs C10orf137-CNTN2 C10orf137 chr10 127441464 CNTN2 chr1 205013685 Exonic hg19 NA W25115 Out-of-frame Inter-chr q32.1 109602 ChimerSeq ChiTaRs ChiTaRs CUX1-ATM CUX1 chr7 101708601 ATM chr11 108105555 Exonic hg19 NA BP431950 Out-of-frame Inter-chr q22.1 Tumor suppressor gene Transcription factor q22.3 Atypical:PIKK Oncogene Tumor suppressor gene 109603 ChimerSeq ChiTaRs ChiTaRs CCT7-MOSPD3 CCT7 chr2 73480133 MOSPD3 chr7 100211226 Exonic hg19 NA AI183764 Out-of-frame Inter-chr p13.2 q22.1 109604 ChimerSeq ChiTaRs ChiTaRs NAP1L4-MBP NAP1L4 chr11 2985061 MBP chr18 74696747 Exonic hg19 NA DA264641 Out-of-frame Inter-chr q23 109605 ChimerSeq ChiTaRs ChiTaRs SLC39A1-BLK SLC39A1 chr1 153932461 BLK chr8 11406547 Exonic hg19 NA BF743866 Out-of-frame Inter-chr q21.3 Tumor suppressor gene p23.1 TK:Src 109606 ChimerSeq ChiTaRs ChiTaRs CCDC14-SDCCAG8 CCDC14 chr3 123680056 SDCCAG8 chr1 243468013 Exonic hg19 NA AA328928 Out-of-frame Inter-chr q21.1 109607 ChimerSeq ChiTaRs ChiTaRs HNRNPD-NOL6 HNRNPD chr4 83295133 NOL6 chr9 33465827 Exonic hg19 NA BM835099 Out-of-frame Inter-chr q21.22 p13.3 109608 ChimerSeq ChiTaRs ChiTaRs ZNF436-RAPGEF3 ZNF436 chr1 23686990 RAPGEF3 chr12 48140053 Exonic hg19 NA BF841153 Out-of-frame Inter-chr Transcription factor q13.11 109609 ChimerSeq ChiTaRs ChiTaRs MXI1-HIF1A MXI1 chr10 112039052 HIF1A chr14 62207754 Exonic hg19 NA BE767238 In-Frame Inter-chr q25.2 Tumor suppressor gene Transcription factor q23.2 Oncogene Tumor suppressor gene Transcription factor 109610 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-ALDOB INS-IGF2 chr11 2153101 ALDOB chr9 104188841 Exonic hg19 NA AI061606 Out-of-frame Inter-chr p15.5 q31.1 Oncogene 109611 ChimerSeq ChiTaRs ChiTaRs GFRA1-RNPS1 GFRA1 chr10 117823560 RNPS1 chr16 2312286 Exonic hg19 NA BG272918 Out-of-frame Inter-chr q25.3 p13.3 109612 ChimerSeq ChiTaRs ChiTaRs GNB2L1-SNX11 GNB2L1 chr5 180665182 SNX11 chr17 46198854 Exonic hg19 NA AI086557 Out-of-frame Inter-chr Tumor suppressor gene q21.32 109613 ChimerSeq ChiTaRs ChiTaRs KIF1B-YWHAE KIF1B chr1 10366986 YWHAE chr17 1265240 Exonic hg19 NA DA564386 Out-of-frame Inter-chr p36.22 Tumor suppressor gene p13.3 109614 ChimerSeq ChiTaRs ChiTaRs VPS28-LOC100507412 VPS28 chr8 145653915 LOC100507412 chr? 110054 Exonic hg19 NA BP339985 Out-of-frame Inter-chr q24.3 109615 ChimerSeq ChiTaRs ChiTaRs ZNF655-PAXIP1 ZNF655 chr7 99158320 PAXIP1 chr7 154785436 Exonic hg19 NA DC390148 Out-of-frame Intra-chr q22.1 Transcription factor q36.2 109616 ChimerSeq ChiTaRs ChiTaRs RAPGEF5-LUC7L2 RAPGEF5 chr7 22233361 LUC7L2 chr7 139060804 Exonic hg19 NA DA302213 Out-of-frame Intra-chr p15.3 q34 109617 ChimerSeq ChiTaRs ChiTaRs NSL1-PRKAR1A NSL1 chr1 212977979 PRKAR1A chr17 66526896 Exonic hg19 NA BI550151 Out-of-frame Inter-chr q32.3 q24.2 Oncogene Tumor suppressor gene 109618 ChimerSeq ChiTaRs ChiTaRs PLA2G2A-MLLT4 PLA2G2A chr1 20301994 MLLT4 chr6 168352373 Exonic hg19 NA AI418780 Out-of-frame Inter-chr p36.13 Tumor suppressor gene 109619 ChimerSeq ChiTaRs ChiTaRs SNHG5-HEY1 SNHG5 chr6 86387373 HEY1 chr8 80677960 Exonic hg19 NA DA946891 Out-of-frame Inter-chr q14.3 q21.13 Transcription factor 109620 ChimerSeq ChiTaRs ChiTaRs KCNIP1-NEAT1 KCNIP1 chr5 169805563 NEAT1 chr11 65190451 Exonic hg19 NA BF889071 Out-of-frame Inter-chr q35.1 q13.1 109621 ChimerSeq ChiTaRs ChiTaRs BCYRN1-RPL28 BCYRN1 chrX 70517282 RPL28 chr19 55899686 Exonic hg19 NA BQ653766 Out-of-frame Inter-chr p21 q13.42 109622 ChimerSeq ChiTaRs ChiTaRs SLC45A1-EIF3K SLC45A1 chr1 8399611 EIF3K chr19 39109846 Exonic hg19 NA BE909212 Out-of-frame Inter-chr p36.23 109623 ChimerSeq ChiTaRs ChiTaRs AKNAD1-LANCL1 AKNAD1 chr1 109477273 LANCL1 chr2 211329631 Exonic hg19 NA CN347114 Out-of-frame Inter-chr p13.3 q34 109624 ChimerSeq ChiTaRs ChiTaRs H1FX-AS1-SLX4 H1FX-AS1 chr3 129045065 SLX4 chr16 3631186 Exonic hg19 NA AX747004 Out-of-frame Inter-chr q21.3 p13.3 Tumor suppressor gene 109625 ChimerSeq ChiTaRs ChiTaRs KIF13B-TRAP1 KIF13B chr8 29043897 TRAP1 chr16 3708134 Exonic hg19 NA BE728037 Out-of-frame Inter-chr p12 p13.3 109626 ChimerSeq ChiTaRs ChiTaRs KCNK2-TMBIM6 KCNK2 chr1 215408852 TMBIM6 chr12 50156706 Exonic hg19 NA CF129966 Out-of-frame Inter-chr q41 q13.12 109627 ChimerSeq ChiTaRs ChiTaRs HNRNPA3-BCYRN1 HNRNPA3 chr2 178082550 BCYRN1 chrX 70517290 Exonic hg19 NA DR158276 Out-of-frame Inter-chr q31.2 p21 109628 ChimerSeq ChiTaRs ChiTaRs FN1-APOD FN1 chr2 216269328 APOD chr3 195295740 Exonic hg19 NA BG926842 Out-of-frame Inter-chr q35 Oncogene q29 109629 ChimerSeq ChiTaRs ChiTaRs ZEB2-GPD1L ZEB2 chr2 145277558 GPD1L chr3 32148134 Exonic hg19 NA DA778688 Out-of-frame Inter-chr q22.3 Transcription factor p22.3 109630 ChimerSeq ChiTaRs ChiTaRs CLDN11-KCNMB4 CLDN11 chr3 170141026 KCNMB4 chr12 70824368 Exonic hg19 NA BP212615 Out-of-frame Inter-chr q26.2 q15 109631 ChimerSeq ChiTaRs ChiTaRs ZER1-ATP1A1 ZER1 chr9 131513539 ATP1A1 chr1 116940578 Exonic hg19 NA BU845840 Out-of-frame Inter-chr q34.11 p13.1 109632 ChimerSeq ChiTaRs ChiTaRs PUM1-ARV1 PUM1 chr1 31481060 ARV1 chr1 231134946 Exonic hg19 NA CD723230 Out-of-frame Intra-chr p35.2 q42.2 109633 ChimerSeq ChiTaRs ChiTaRs CUX1-MTMR7 CUX1 chr7 101525765 MTMR7 chr8 17262294 Exonic hg19 NA AI732560 Out-of-frame Inter-chr q22.1 Tumor suppressor gene Transcription factor p22 109634 ChimerSeq ChiTaRs ChiTaRs NKIRAS1-MRPL9 NKIRAS1 chr3 23961043 MRPL9 chr1 151732578 Exonic hg19 NA CA748650 Out-of-frame Inter-chr p24.2 q21.3 109635 ChimerSeq ChiTaRs ChiTaRs FAM46A-EPAS1 FAM46A chr6 82462384 EPAS1 chr2 46601474 Exonic hg19 NA BF197110 Out-of-frame Inter-chr q14.1 p21 Tumor suppressor gene Transcription factor 109636 ChimerSeq ChiTaRs ChiTaRs TMEM63A-LYZ TMEM63A chr1 226042412 LYZ chr12 69747527 Exonic hg19 NA AK093860 Out-of-frame Inter-chr q42.12 q15 109637 ChimerSeq ChiTaRs ChiTaRs CYB5R1-CYB5R1 CYB5R1 chr1 202931198 CYB5R1 chr1 202931186 Exonic hg19 NA BU676300 Out-of-frame Intra-chr q32.1 q32.1 109638 ChimerSeq ChiTaRs ChiTaRs MINOS1-NPDC1 MINOS1 chr1 19934929 NPDC1 chr9 139935122 Exonic hg19 NA CN310500 5'UTR-CDS Inter-chr p36.13 q34.3 109639 ChimerSeq ChiTaRs ChiTaRs SLC25A43-SLC25A43 SLC25A43 chrX 118551734 SLC25A43 chrX 118587379 Exonic hg19 NA AI631460 Out-of-frame Intra-chr q24 q24 109640 ChimerSeq ChiTaRs ChiTaRs CHRNA9-IK CHRNA9 chr4 40349601 IK chr5 140041500 Exonic hg19 NA BM983660 Out-of-frame Inter-chr p14 q31.3 109641 ChimerSeq ChiTaRs ChiTaRs FLNA-FLNA FLNA chrX 153581498 FLNA chrX 153578476 Exonic hg19 NA BI013450 Out-of-frame Intra-chr q28 Tumor suppressor gene q28 Tumor suppressor gene 109642 ChimerSeq ChiTaRs ChiTaRs ECT2-ECT2 ECT2 chr3 172504366 ECT2 chr3 172479400 Exonic hg19 NA BE080860 Out-of-frame Intra-chr q26.31 Tumor suppressor gene q26.31 Tumor suppressor gene 109643 ChimerSeq ChiTaRs ChiTaRs RPL30-TBC1D5 RPL30 chr8 99057773 TBC1D5 chr3 17279809 Exonic hg19 NA DB125840 Out-of-frame Inter-chr q22.2 p24.3 109644 ChimerSeq ChiTaRs ChiTaRs PDE5A-EHBP1 PDE5A chr4 120421121 EHBP1 chr2 63251185 Exonic hg19 NA AW102720 Out-of-frame Inter-chr q26 p15 109645 ChimerSeq ChiTaRs ChiTaRs BCAR3-BCAR3 BCAR3 chr1 94027583 BCAR3 chr1 94027661 Exonic hg19 NA CA311930 Out-of-frame Intra-chr p22.1 p22.1 109646 ChimerSeq ChiTaRs ChiTaRs ZMIZ1-ZMIZ1 ZMIZ1 chr10 81074462 ZMIZ1 chr10 81074440 Exonic hg19 NA BQ428140 Out-of-frame Intra-chr q22.3 q22.3 109647 ChimerSeq ChiTaRs ChiTaRs HIATL1-HIATL1 HIATL1 chr9 97202044 HIATL1 chr9 97201957 Exonic hg19 NA AA469180 Out-of-frame Intra-chr 109648 ChimerSeq ChiTaRs ChiTaRs PSAP-PSAP PSAP chr10 73588681 PSAP chr10 73579569 Exonic hg19 NA BE176600 Out-of-frame Intra-chr q22.1 q22.1 109649 ChimerSeq ChiTaRs ChiTaRs TTYH3-TTYH3 TTYH3 chr7 2681138 TTYH3 chr7 2680951 Exonic hg19 NA N36680 Out-of-frame Intra-chr p22.3 p22.3 109650 ChimerSeq ChiTaRs ChiTaRs LEPROT-CTSS LEPROT chr1 65901690 CTSS chr1 150705381 Exonic hg19 NA CD364830 3'UTR-3'UTR Intra-chr p31.3 q21.3 109651 ChimerSeq ChiTaRs ChiTaRs MAST4-MAST4 MAST4 chr5 66353437 MAST4 chr5 66352995 Exonic hg19 NA CB322010 Out-of-frame Intra-chr q12.3 AGC:MAST q12.3 AGC:MAST 109652 ChimerSeq ChiTaRs ChiTaRs SLU7-IGJ SLU7 chr5 159829186 IGJ chr4 71521461 Exonic hg19 NA AW794940 Out-of-frame Inter-chr q33.3 109653 ChimerSeq ChiTaRs ChiTaRs KIF1B-TUBA1B KIF1B chr1 10401516 TUBA1B chr12 49521741 Exonic hg19 NA AV718300 Out-of-frame Inter-chr p36.22 Tumor suppressor gene q13.12 109654 ChimerSeq ChiTaRs ChiTaRs TANC1-BTF3L4 TANC1 chr2 159860919 BTF3L4 chr1 52551650 Exonic hg19 NA AA729380 Out-of-frame Inter-chr q24.2 p32.3 109655 ChimerSeq ChiTaRs ChiTaRs PDCD11-FYCO1 PDCD11 chr10 105200330 FYCO1 chr3 45962232 Exonic hg19 NA AI924910 Out-of-frame Inter-chr q24.33 p21.31 109656 ChimerSeq ChiTaRs ChiTaRs TNFSF10-TNFSF10 TNFSF10 chr3 172224429 TNFSF10 chr3 172224390 Exonic hg19 NA BU674610 Out-of-frame Intra-chr q26.31 q26.31 109657 ChimerSeq ChiTaRs ChiTaRs ENTPD2-CLEC16A ENTPD2 chr9 139943074 CLEC16A chr16 11273588 Exonic hg19 NA BG958300 Out-of-frame Inter-chr q34.3 p13.13 109658 ChimerSeq ChiTaRs ChiTaRs H6PD-METTL16 H6PD chr1 9295721 METTL16 chr17 2319343 Exonic hg19 NA BC047770 Out-of-frame Inter-chr p36.22 p13.3 109659 ChimerSeq ChiTaRs ChiTaRs SLC19A2-EIF2S3 SLC19A2 chr1 169434644 EIF2S3 chrX 24086202 Exonic hg19 NA BE177610 Out-of-frame Inter-chr q24.2 p22.11 109660 ChimerSeq ChiTaRs ChiTaRs TGFB2-CDH2 TGFB2 chr1 218616662 CDH2 chr18 25543358 Exonic hg19 NA BE767210 Out-of-frame Inter-chr q41 q12.1 Oncogene 109661 ChimerSeq ChiTaRs ChiTaRs PIKFYVE-PIKFYVE PIKFYVE chr2 209221863 PIKFYVE chr2 209221563 Exonic hg19 NA AA578440 Out-of-frame Intra-chr q34 q34 109662 ChimerSeq ChiTaRs ChiTaRs KCNIP1-TROVE2 KCNIP1 chr5 169793243 TROVE2 chr1 193057020 Exonic hg19 NA AA074210 Out-of-frame Inter-chr q35.1 q31.2 109663 ChimerSeq ChiTaRs ChiTaRs WDR26-RPS14 WDR26 chr1 224614528 RPS14 chr5 149823801 Exonic hg19 NA AF116710 Out-of-frame Inter-chr q42.12 q33.1 109664 ChimerSeq ChiTaRs ChiTaRs MALSU1-MALSU1 MALSU1 chr7 23347410 MALSU1 chr7 23348497 Exonic hg19 NA AI571420 Out-of-frame Intra-chr p15.3 p15.3 109665 ChimerSeq ChiTaRs ChiTaRs RGS10-RGS10 RGS10 chr10 121283496 RGS10 chr10 121279267 Exonic hg19 NA AW749630 Out-of-frame Intra-chr q26.11 q26.11 109666 ChimerSeq ChiTaRs ChiTaRs C6orf106-SORBS2 C6orf106 chr6 34555147 SORBS2 chr4 186686434 Exonic hg19 NA BM969290 Out-of-frame Inter-chr p21.31 q35.1 109667 ChimerSeq ChiTaRs ChiTaRs RALGDS-RALGDS RALGDS chr9 135984227 RALGDS chr9 135973110 Exonic hg19 NA AK090450 Out-of-frame Intra-chr q34.2 Oncogene q34.2 Oncogene 109668 ChimerSeq ChiTaRs ChiTaRs CAPN14-HERC3 CAPN14 chr2 31397364 HERC3 chr4 89629028 Exonic hg19 NA AI908960 Out-of-frame Inter-chr p23.1 q22.1 109669 ChimerSeq ChiTaRs ChiTaRs REPS1-PDE4D REPS1 chr6 139228740 PDE4D chr5 59386751 Exonic hg19 NA BE928480 Out-of-frame Inter-chr q24.1 q12.1 109670 ChimerSeq ChiTaRs ChiTaRs ALCAM-LYZ ALCAM chr3 105239869 LYZ chr12 69747555 Exonic hg19 NA BC017840 Out-of-frame Inter-chr q13.11 q15 109671 ChimerSeq ChiTaRs ChiTaRs ATP13A2-ATP13A2 ATP13A2 chr1 17320713 ATP13A2 chr1 17321982 Exonic hg19 NA AK130020 Out-of-frame Intra-chr p36.13 p36.13 109672 ChimerSeq ChiTaRs ChiTaRs IRF6-JUP IRF6 chr1 209963892 JUP chr17 39740552 Exonic hg19 NA BQ352330 Out-of-frame Inter-chr q32.2 Transcription factor q21.2 Tumor suppressor gene 109673 ChimerSeq ChiTaRs ChiTaRs RAB11FIP2-RAB11FIP2 RAB11FIP2 chr10 119765120 RAB11FIP2 chr10 119765173 Exonic hg19 NA BF798700 Out-of-frame Intra-chr q26.11 q26.11 109674 ChimerSeq ChiTaRs ChiTaRs SCP2-PJA2 SCP2 chr1 53517282 PJA2 chr5 108714077 Exonic hg19 NA AI082430 Out-of-frame Inter-chr p32.3 q21.3 109675 ChimerSeq ChiTaRs ChiTaRs KCNH7-ZNF16 KCNH7 chr2 163383566 ZNF16 chr8 146160653 Exonic hg19 NA AW811810 Out-of-frame Inter-chr q24.2 q24.3 Transcription factor 109676 ChimerSeq ChiTaRs ChiTaRs ULK4-PAQR3 ULK4 chr3 41977893 PAQR3 chr4 79851809 Exonic hg19 NA AW812700 Out-of-frame Inter-chr p22.1 Other:ULK q21.21 109677 ChimerSeq ChiTaRs ChiTaRs TET3-TET3 TET3 chr2 74316770 TET3 chr2 74316550 Exonic hg19 NA BF366530 Out-of-frame Intra-chr p13.1 Transcription factor p13.1 Transcription factor 109678 ChimerSeq ChiTaRs ChiTaRs CLCN3-CLCN3 CLCN3 chr4 170541809 CLCN3 chr4 170541799 Exonic hg19 NA X78520 Out-of-frame Intra-chr q33 q33 109679 ChimerSeq ChiTaRs ChiTaRs FRS3-FRS3 FRS3 chr6 41739669 FRS3 chr6 41738740 Exonic hg19 NA CA777700 Out-of-frame Intra-chr p21.1 Tumor suppressor gene p21.1 Tumor suppressor gene 109680 ChimerSeq ChiTaRs ChiTaRs TMEM214-TMEM214 TMEM214 chr2 27264369 TMEM214 chr2 27264498 Exonic hg19 NA CA427500 Out-of-frame Intra-chr p23.3 p23.3 109681 ChimerSeq ChiTaRs ChiTaRs GNB1-GNB1 GNB1 chr1 1731003 GNB1 chr1 1729724 Exonic hg19 NA AI933070 Out-of-frame Intra-chr p36.33 p36.33 109682 ChimerSeq ChiTaRs ChiTaRs IKZF2-DOCK2 IKZF2 chr2 214012328 DOCK2 chr5 169435498 Exonic hg19 NA DA440020 Out-of-frame Inter-chr q34 Tumor suppressor gene Transcription factor q35.1 109683 ChimerSeq ChiTaRs ChiTaRs EIF3B-FAM107B EIF3B chr7 2408331 FAM107B chr10 14633560 Exonic hg19 NA BF812060 Out-of-frame Inter-chr p22.3 p13 109684 ChimerSeq ChiTaRs ChiTaRs TMF1-TMF1 TMF1 chr3 69082733 TMF1 chr3 69097398 Exonic hg19 NA BM828170 Out-of-frame Intra-chr p14.1 Transcription factor p14.1 Transcription factor 109685 ChimerSeq ChiTaRs ChiTaRs WDR33-DARS WDR33 chr2 128566048 DARS chr2 136691508 Exonic hg19 NA AW363050 Out-of-frame Intra-chr q14.3 q21.3 109686 ChimerSeq ChiTaRs ChiTaRs WDR1-GCDH WDR1 chr4 10080617 GCDH chr19 13004932 Exonic hg19 NA AA167420 Out-of-frame Inter-chr p16.1 p13.13 109687 ChimerSeq ChiTaRs ChiTaRs SOX13-SOX13 SOX13 chr1 204086304 SOX13 chr1 204086743 Exonic hg19 NA BG988450 Out-of-frame Intra-chr q32.1 Transcription factor q32.1 Transcription factor 109688 ChimerSeq ChiTaRs ChiTaRs SCFD2-SCFD2 SCFD2 chr4 53768182 SCFD2 chr4 53768134 Exonic hg19 NA BF368690 Out-of-frame Intra-chr q12 q12 109689 ChimerSeq ChiTaRs ChiTaRs LOC100124692-ADIPOR2 LOC100124692 chr7 141887591 ADIPOR2 chr12 1889792 Exonic hg19 NA BF752090 Out-of-frame Inter-chr p13.33 109690 ChimerSeq ChiTaRs ChiTaRs NRCAM-NRCAM NRCAM chr7 107788350 NRCAM chr7 107788944 Exonic hg19 NA BF593690 Out-of-frame Intra-chr q31.1 Tumor suppressor gene q31.1 Tumor suppressor gene 109691 ChimerSeq ChiTaRs ChiTaRs GPX3-RPN2 GPX3 chr5 150408522 RPN2 chr20 35812585 Exonic hg19 NA AA740310 Out-of-frame Inter-chr q33.1 Tumor suppressor gene q11.23 109692 ChimerSeq ChiTaRs ChiTaRs PARD3B-PARD3B PARD3B chr2 206480537 PARD3B chr2 205410516 Exonic hg19 NA AF428250 Out-of-frame Intra-chr q33.3 q33.3 109693 ChimerSeq ChiTaRs ChiTaRs PAK2-PAK2 PAK2 chr3 196556561 PAK2 chr3 196556556 Exonic hg19 NA AA847430 Out-of-frame Intra-chr q29 STE:STE20 q29 STE:STE20 109694 ChimerSeq ChiTaRs ChiTaRs CD74-CD74 CD74 chr5 149781523 CD74 chr5 149781203 Exonic hg19 NA H20340 Out-of-frame Intra-chr q33.1 q33.1 109695 ChimerSeq ChiTaRs ChiTaRs BCOR-CHCHD7 BCOR chrX 39911469 CHCHD7 chr8 57130684 Exonic hg19 NA AI904310 Out-of-frame Inter-chr p11.4 Oncogene q12.1 109696 ChimerSeq ChiTaRs ChiTaRs PDGFRL-PDGFRL PDGFRL chr8 17486065 PDGFRL chr8 17491674 Exonic hg19 NA AA455210 Out-of-frame Intra-chr p22 Tumor suppressor gene p22 Tumor suppressor gene 109697 ChimerSeq ChiTaRs ChiTaRs RUNX3-RUNX3 RUNX3 chr1 25233806 RUNX3 chr1 25228816 Exonic hg19 NA BU431690 Out-of-frame Intra-chr p36.11 Tumor suppressor gene Transcription factor p36.11 Tumor suppressor gene Transcription factor 109698 ChimerSeq ChiTaRs ChiTaRs EML3-EML3 EML3 chr11 62370289 EML3 chr11 62370278 Exonic hg19 NA BG470510 Out-of-frame Intra-chr q12.3 q12.3 109699 ChimerSeq ChiTaRs ChiTaRs EHF-EHF EHF chr11 34676420 EHF chr11 34676429 Exonic hg19 NA BF802590 Out-of-frame Intra-chr p13 Tumor suppressor gene Transcription factor p13 Tumor suppressor gene Transcription factor 109700 ChimerSeq ChiTaRs ChiTaRs GABRE-JUP GABRE chrX 151123890 JUP chr17 39767326 Exonic hg19 NA CV354260 Out-of-frame Inter-chr q28 q21.2 Tumor suppressor gene 109701 ChimerSeq ChiTaRs ChiTaRs RAB18-FSTL1 RAB18 chr10 27821466 FSTL1 chr3 120113468 Exonic hg19 NA CB051970 Out-of-frame Inter-chr p12.1 q13.33 109702 ChimerSeq ChiTaRs ChiTaRs HK1-MTOR HK1 chr10 71139779 MTOR chr1 11167074 Exonic hg19 NA BE149450 Out-of-frame Inter-chr q22.1 p36.22 Oncogene 109703 ChimerSeq ChiTaRs ChiTaRs PNPLA2-CCDC162P PNPLA2 chr11 825218 CCDC162P chr6 109669115 Exonic hg19 NA BQ446930 Out-of-frame Inter-chr p15.5 q21 109704 ChimerSeq ChiTaRs ChiTaRs CPNE4-PSAT1 CPNE4 chr3 131966685 PSAT1 chr9 80944226 Exonic hg19 NA BF989450 Out-of-frame Inter-chr q22.1 q21.2 109705 ChimerSeq ChiTaRs ChiTaRs HUWE1-TMEM229B HUWE1 chrX 53570931 TMEM229B chr14 67938813 Exonic hg19 NA BF803030 Out-of-frame Inter-chr p11.22 q24.1 109706 ChimerSeq ChiTaRs ChiTaRs TAF7-CYFIP2 TAF7 chr5 140699143 CYFIP2 chr5 156746896 Exonic hg19 NA BF089910 Out-of-frame Intra-chr q31.3 q33.3 109707 ChimerSeq ChiTaRs ChiTaRs CCDC93-NUBPL CCDC93 chr2 118718946 NUBPL chr14 32214844 Exonic hg19 NA BF817500 Out-of-frame Inter-chr q14.1 q12 109708 ChimerSeq ChiTaRs ChiTaRs SCAF8-ATPAF1 SCAF8 chr6 155058061 ATPAF1 chr1 47116678 Exonic hg19 NA CV399120 Out-of-frame Inter-chr q25.2 p33 109709 ChimerSeq ChiTaRs ChiTaRs FSTL1-FSTL1 FSTL1 chr3 120146159 FSTL1 chr3 120156494 Exonic hg19 NA DA812650 Out-of-frame Intra-chr q13.33 q13.33 109710 ChimerSeq ChiTaRs ChiTaRs CTSB-CTSB CTSB chr8 11702081 CTSB chr8 11702107 Exonic hg19 NA BF831500 Out-of-frame Intra-chr p23.1 p23.1 109711 ChimerSeq ChiTaRs ChiTaRs PPP3CA-DDX42 PPP3CA chr4 102096367 DDX42 chr17 61896460 Exonic hg19 NA AW800680 Out-of-frame Inter-chr q24 q23.3 109712 ChimerSeq ChiTaRs ChiTaRs SAT1-SERPINE1 SAT1 chrX 23804318 SERPINE1 chr7 100781379 Exonic hg19 NA BE765420 Out-of-frame Inter-chr p22.11 q22.1 109713 ChimerSeq ChiTaRs ChiTaRs LINC00461-LINC00461 LINC00461 chr5 87960592 LINC00461 chr5 87960638 Exonic hg19 NA AI687160 Out-of-frame Intra-chr q14.3 q14.3 109714 ChimerSeq ChiTaRs ChiTaRs TADA2B-DPP6 TADA2B chr4 7058246 DPP6 chr7 154023430 Exonic hg19 NA AW899150 Out-of-frame Inter-chr p16.1 109715 ChimerSeq ChiTaRs ChiTaRs UBE2L6-UBE2L6 UBE2L6 chr11 57319446 UBE2L6 chr11 57319912 Exonic hg19 NA AA502470 Out-of-frame Intra-chr q12.1 q12.1 109716 ChimerSeq ChiTaRs ChiTaRs ENC1-ENC1 ENC1 chr5 73923407 ENC1 chr5 73923617 Exonic hg19 NA AA593360 Out-of-frame Intra-chr q13.3 q13.3 109717 ChimerSeq ChiTaRs ChiTaRs ENO1-APP ENO1 chr1 8921220 APP chr21 27253998 Exonic hg19 NA AW074340 Out-of-frame Inter-chr p36.23 q21.3 109718 ChimerSeq ChiTaRs ChiTaRs ENO1-ENO1 ENO1 chr1 8924001 ENO1 chr1 8923961 Exonic hg19 NA CA419890 Out-of-frame Intra-chr p36.23 p36.23 109719 ChimerSeq ChiTaRs ChiTaRs LAS1L-SDC3 LAS1L chrX 64739256 SDC3 chr1 31345192 Exonic hg19 NA BF935530 Out-of-frame Inter-chr q12 p35.2 109720 ChimerSeq ChiTaRs ChiTaRs YARS-SPEN YARS chr1 33241178 SPEN chr1 16266221 Exonic hg19 NA AA165670 Out-of-frame Intra-chr p35.1 p36.21 Transcription factor 109721 ChimerSeq ChiTaRs ChiTaRs ALOX5-ABCA13 ALOX5 chr10 45922547 ABCA13 chr7 48626837 Exonic hg19 NA BF895730 Out-of-frame Inter-chr p12.3 109722 ChimerSeq ChiTaRs ChiTaRs RBMX-RBMX RBMX chrX 135955211 RBMX chrX 135955243 Exonic hg19 NA AA460960 Out-of-frame Intra-chr q26.3 Tumor suppressor gene q26.3 Tumor suppressor gene 109723 ChimerSeq ChiTaRs ChiTaRs SOX7-ITGA3 SOX7 chr8 10583281 ITGA3 chr17 48140710 Exonic hg19 NA BE149790 Out-of-frame Inter-chr p23.1 Tumor suppressor gene Transcription factor q21.33 109724 ChimerSeq ChiTaRs ChiTaRs TMEM14B-CAPRIN1 TMEM14B chr6 10748501 CAPRIN1 chr11 34120936 Exonic hg19 NA BM153330 Out-of-frame Inter-chr p24.2 p13 109725 ChimerSeq ChiTaRs ChiTaRs LPP-AS2-ST6GAL1 LPP-AS2 chr3 187871809 ST6GAL1 chr3 186790631 Exonic hg19 NA BM919650 Out-of-frame Intra-chr q27.3 Oncogene q27.3 109726 ChimerSeq ChiTaRs ChiTaRs KDM3B-KDM3B KDM3B chr5 137727200 KDM3B chr5 137722245 Exonic hg19 NA BQ308590 Out-of-frame Intra-chr q31.2 Tumor suppressor gene q31.2 Tumor suppressor gene 109727 ChimerSeq ChiTaRs ChiTaRs POMGNT1-POMGNT1 POMGNT1 chr1 46658237 POMGNT1 chr1 46661156 Exonic hg19 NA AK026430 Out-of-frame Intra-chr p34.1 p34.1 109728 ChimerSeq ChiTaRs ChiTaRs TSNARE1-RIF1 TSNARE1 chr8 143351500 RIF1 chr2 152333352 Exonic hg19 NA U25770 Out-of-frame Inter-chr q24.3 q23.3 109729 ChimerSeq ChiTaRs ChiTaRs PINK1-PINK1 PINK1 chr1 20966396 PINK1 chr1 20965323 Exonic hg19 NA CV340510 Out-of-frame Intra-chr p36.12 Other:NKF2 p36.12 Other:NKF2 109730 ChimerSeq ChiTaRs ChiTaRs SLC1A2-SLC1A2 SLC1A2 chr11 35274000 SLC1A2 chr11 35273514 Exonic hg19 NA BF945510 Out-of-frame Intra-chr p13 p13 109731 ChimerSeq ChiTaRs ChiTaRs EEF1A1-PMS1 EEF1A1 chr6 74228155 PMS1 chr2 190708702 Exonic hg19 NA AY540750 Out-of-frame Inter-chr q13 Tumor suppressor gene q32.2 Oncogene 109732 ChimerSeq ChiTaRs ChiTaRs ZNF318-ATF6 ZNF318 chr6 43286789 ATF6 chr1 161842521 Exonic hg19 NA BF946220 Out-of-frame Inter-chr p21.1 Transcription factor q23.3 Transcription factor 109733 ChimerSeq ChiTaRs ChiTaRs EPB41-PRG2 EPB41 chr1 29446532 PRG2 chr11 57174427 Exonic hg19 NA AF118070 Out-of-frame Inter-chr p35.3 Tumor suppressor gene q12.1 109734 ChimerSeq ChiTaRs ChiTaRs EFHB-EXOC4 EFHB chr3 19941587 EXOC4 chr7 133530807 Exonic hg19 NA BE182340 Out-of-frame Inter-chr p24.3 q33 109735 ChimerSeq ChiTaRs ChiTaRs FAIM3-FAIM3 FAIM3 chr1 207077963 FAIM3 chr1 207078278 Exonic hg19 NA AI743020 Out-of-frame Intra-chr 109736 ChimerSeq ChiTaRs ChiTaRs RASA2-RASA2 RASA2 chr3 141290314 RASA2 chr3 141289820 Exonic hg19 NA BF748340 Out-of-frame Intra-chr q23 q23 109737 ChimerSeq ChiTaRs ChiTaRs PDK3-PDK3 PDK3 chrX 24518622 PDK3 chrX 24517518 Exonic hg19 NA AV755280 Out-of-frame Intra-chr p22.11 p22.11 109738 ChimerSeq ChiTaRs ChiTaRs FAM136A-FAM136A FAM136A chr2 70523490 FAM136A chr2 70523123 Exonic hg19 NA AA662580 Out-of-frame Intra-chr p13.3 p13.3 109739 ChimerSeq ChiTaRs ChiTaRs AFF1-PHACTR2 AFF1 chr4 87900630 PHACTR2 chr6 144086721 Exonic hg19 NA BE929030 Out-of-frame Inter-chr q21.3 Oncogene q24.2 109740 ChimerSeq ChiTaRs ChiTaRs USH1C-USH1C USH1C chr11 17565916 USH1C chr11 17544965 Exonic hg19 NA W22160 5'UTR-CDS Intra-chr p15.1 p15.1 109741 ChimerSeq ChiTaRs ChiTaRs SMU1-ATXN1 SMU1 chr9 33056970 ATXN1 chr6 16331019 Exonic hg19 NA BF853520 Out-of-frame Inter-chr p21.1 p22.3 109742 ChimerSeq ChiTaRs ChiTaRs ECHS1-ECHS1 ECHS1 chr10 135184208 ECHS1 chr10 135176320 Exonic hg19 NA H39530 Out-of-frame Intra-chr q26.3 q26.3 109743 ChimerSeq ChiTaRs ChiTaRs PAPSS1-PKNOX1 PAPSS1 chr4 108608320 PKNOX1 chr21 44450292 Exonic hg19 NA BQ302970 Out-of-frame Inter-chr q25 q22.3 Tumor suppressor gene Transcription factor 109744 ChimerSeq ChiTaRs ChiTaRs DCAF4L1-LOC100268168 DCAF4L1 chr4 41986489 LOC100268168 chr5 172381785 Exonic hg19 NA AL122070 3'UTR-3'UTR Inter-chr p13 109745 ChimerSeq ChiTaRs ChiTaRs IQCG-LOC100505817 IQCG chr3 197678182 LOC100505817 chr18 70999698 Exonic hg19 NA BG283670 Out-of-frame Inter-chr q29 109746 ChimerSeq ChiTaRs ChiTaRs CIAO1-DHX34 CIAO1 chr2 96938074 DHX34 chr19 47883401 Exonic hg19 NA BG986970 Out-of-frame Inter-chr q11.2 q13.32 109747 ChimerSeq ChiTaRs ChiTaRs DPP10-RUNX1 DPP10 chr2 115344438 RUNX1 chr21 36252912 Exonic hg19 NA DR004240 Out-of-frame Inter-chr q14.1 q22.12 Oncogene Tumor suppressor gene Transcription factor 109748 ChimerSeq ChiTaRs ChiTaRs SLC33A1-SLC33A1 SLC33A1 chr3 155571164 SLC33A1 chr3 155560263 Exonic hg19 NA DB356740 Out-of-frame Intra-chr q25.31 q25.31 109749 ChimerSeq ChiTaRs ChiTaRs PRG2-F11R PRG2 chr11 57175165 F11R chr1 160967488 Exonic hg19 NA CB242530 Out-of-frame Inter-chr q12.1 q23.3 109750 ChimerSeq ChiTaRs ChiTaRs UBA1-UBA1 UBA1 chrX 47056012 UBA1 chrX 47055989 Exonic hg19 NA BF746070 Out-of-frame Intra-chr p11.3 p11.3 109751 ChimerSeq ChiTaRs ChiTaRs LRRC38-RPS16 LRRC38 chr1 13802168 RPS16 chr19 39926191 Exonic hg19 NA BG998400 Out-of-frame Inter-chr p36.21 q13.2 109752 ChimerSeq ChiTaRs ChiTaRs CACNB2-SPARCL1 CACNB2 chr10 18500360 SPARCL1 chr4 88401541 Exonic hg19 NA CB962120 Out-of-frame Inter-chr p12.33 q22.1 Tumor suppressor gene 109753 ChimerSeq ChiTaRs ChiTaRs C1QA-C1QA C1QA chr1 22965903 C1QA chr1 22965911 Exonic hg19 NA BM688700 Out-of-frame Intra-chr p36.12 p36.12 109754 ChimerSeq ChiTaRs ChiTaRs TMEM245-FKBP15 TMEM245 chr9 111801407 FKBP15 chr9 116024995 Exonic hg19 NA BF376850 Out-of-frame Intra-chr q31.3 q32 109755 ChimerSeq ChiTaRs ChiTaRs AUTS2-TRAM1 AUTS2 chr7 69624672 TRAM1 chr8 71507291 Exonic hg19 NA W89040 Out-of-frame Inter-chr q11.22 q13.3 109756 ChimerSeq ChiTaRs ChiTaRs CCT5-CCT5 CCT5 chr5 10262684 CCT5 chr5 10262660 Exonic hg19 NA BU160000 Out-of-frame Intra-chr p15.2 p15.2 109757 ChimerSeq ChiTaRs ChiTaRs EXOSC7-EXOSC7 EXOSC7 chr3 45054160 EXOSC7 chr3 45052836 Exonic hg19 NA CB241820 Out-of-frame Intra-chr p21.31 p21.31 109758 ChimerSeq ChiTaRs ChiTaRs FUBP1-GPM6A FUBP1 chr1 78444889 GPM6A chr4 176622893 Exonic hg19 NA DA113820 Out-of-frame Inter-chr p31.1 Oncogene q34.2 109759 ChimerSeq ChiTaRs ChiTaRs C6orf201-C6orf201 C6orf201 chr6 4116192 C6orf201 chr6 4115940 Exonic hg19 NA BI869450 Out-of-frame Intra-chr p25.2 p25.2 109760 ChimerSeq ChiTaRs ChiTaRs HNRPLL-HNRPLL HNRPLL chr2 38791368 HNRPLL chr2 38791354 Exonic hg19 NA AA639110 Out-of-frame Intra-chr 109761 ChimerSeq ChiTaRs ChiTaRs DDX56-SAMM50 DDX56 chr7 44609453 SAMM50 chr22 44364645 Exonic hg19 NA BE094760 Out-of-frame Inter-chr p13 q13.31 109762 ChimerSeq ChiTaRs ChiTaRs SMYD2-ASNA1 SMYD2 chr1 214507623 ASNA1 chr19 12849348 Exonic hg19 NA BQ374720 Out-of-frame Inter-chr q32.3 p13.13 109763 ChimerSeq ChiTaRs ChiTaRs PAPSS1-PAPSS1 PAPSS1 chr4 108535286 PAPSS1 chr4 108535468 Exonic hg19 NA AI499330 Out-of-frame Intra-chr q25 q25 109764 ChimerSeq ChiTaRs ChiTaRs ALDH7A1-MALAT1 ALDH7A1 chr5 125900868 MALAT1 chr11 65267822 Exonic hg19 NA BF821670 Out-of-frame Inter-chr q23.2 q13.1 109765 ChimerSeq ChiTaRs ChiTaRs LOC100216546-LOC100216546 LOC100216546 chr7 104627829 LOC100216546 chr7 104627146 Exonic hg19 NA DB358950 Out-of-frame Intra-chr 109766 ChimerSeq ChiTaRs ChiTaRs FNTA-FNTA FNTA chr8 42937978 FNTA chr8 42936921 Exonic hg19 NA CK903110 Out-of-frame Intra-chr p11.21 p11.21 109767 ChimerSeq ChiTaRs ChiTaRs MAP3K7-MAP3K7 MAP3K7 chr6 91270213 MAP3K7 chr6 91269709 Exonic hg19 NA BF082260 Out-of-frame Intra-chr q15 STE:STE11 Oncogene q15 STE:STE11 Oncogene 109768 ChimerSeq ChiTaRs ChiTaRs TRAF5-RALGDS TRAF5 chr1 211538188 RALGDS chr9 135977905 Exonic hg19 NA BQ890280 Out-of-frame Inter-chr q32.3 q34.2 Oncogene 109769 ChimerSeq ChiTaRs ChiTaRs OFD1-TINAGL1 OFD1 chrX 13781912 TINAGL1 chr1 32049213 Exonic hg19 NA AW375050 Out-of-frame Inter-chr p22.2 p35.2 109770 ChimerSeq ChiTaRs ChiTaRs TPK1-CYCS TPK1 chr7 144344086 CYCS chr7 25162453 Exonic hg19 NA BM459600 Out-of-frame Intra-chr q35 p15.3 109771 ChimerSeq ChiTaRs ChiTaRs TGFBR1-CANX TGFBR1 chr9 101915729 CANX chr5 179155621 Exonic hg19 NA BE150450 Out-of-frame Inter-chr q22.33 109772 ChimerSeq ChiTaRs ChiTaRs OFCC1-MEGF9 OFCC1 chr6 9973953 MEGF9 chr9 123474605 Exonic hg19 NA CV408930 Out-of-frame Inter-chr p24.3 q33.2 109773 ChimerSeq ChiTaRs ChiTaRs TBL1XR1-RGS17 TBL1XR1 chr3 176915130 RGS17 chr6 153332781 Exonic hg19 NA BU859760 Out-of-frame Inter-chr q26.32 q25.2 KB Pub 109774 ChimerSeq ChiTaRs ChiTaRs AGPAT9-AGPAT9 AGPAT9 chr4 84474581 AGPAT9 chr4 84475719 Exonic hg19 NA BE465180 Out-of-frame Intra-chr 109775 ChimerSeq ChiTaRs ChiTaRs DHCR24-DHCR24 DHCR24 chr1 55316267 DHCR24 chr1 55316263 Exonic hg19 NA AA658920 Out-of-frame Intra-chr p32.3 p32.3 109776 ChimerSeq ChiTaRs ChiTaRs HIBADH-MARCH6 HIBADH chr7 27595747 2006_ 3_ 1_ chr5 10411628 Exonic hg19 NA BQ346350 Out-of-frame Inter-chr p15.2 109777 ChimerSeq ChiTaRs ChiTaRs ATXN7-ARF1 ATXN7 chr3 63989021 ARF1 chr1 228286285 Exonic hg19 NA BG272060 Out-of-frame Inter-chr p14.1 q42.13 Tumor suppressor gene 109778 ChimerSeq ChiTaRs ChiTaRs TRIM41-MALAT1 TRIM41 chr5 180662803 MALAT1 chr11 65271409 Exonic hg19 NA AA532630 Out-of-frame Inter-chr q35.3 q13.1 109779 ChimerSeq ChiTaRs ChiTaRs KIAA1751-INS-IGF2 KIAA1751 chr1 1890375 INS-IGF2 chr11 2150840 Exonic hg19 NA BI058580 Out-of-frame Inter-chr p15.5 109780 ChimerSeq ChiTaRs ChiTaRs SH3PXD2B-BCAR3 SH3PXD2B chr5 171853528 BCAR3 chr1 94142708 Exonic hg19 NA BF806130 Out-of-frame Inter-chr q35.1 p22.1 109781 ChimerSeq ChiTaRs ChiTaRs BRAF-BRAF BRAF chr7 140494264 BRAF chr7 140500161 Exonic hg19 NA BE083400 Out-of-frame Intra-chr q34 TKL:RAF Oncogene q34 TKL:RAF Oncogene 109782 ChimerSeq ChiTaRs ChiTaRs DHCR24-QSOX2 DHCR24 chr1 55319284 QSOX2 chr9 139118628 Exonic hg19 NA AW997410 Out-of-frame Inter-chr p32.3 q34.3 109783 ChimerSeq ChiTaRs ChiTaRs GLIS3-GLIS3 GLIS3 chr9 3825295 GLIS3 chr9 3825169 Exonic hg19 NA CB242350 Out-of-frame Intra-chr p24.2 Transcription factor p24.2 Transcription factor 109784 ChimerSeq ChiTaRs ChiTaRs FN1-OPHN1 FN1 chr2 216256460 OPHN1 chrX 67297707 Exonic hg19 NA BI057640 Out-of-frame Inter-chr q35 Oncogene q12 109785 ChimerSeq ChiTaRs ChiTaRs ZFPM2-BOLA2 ZFPM2 chr8 106382731 BOLA2 chr16 29933826 Exonic hg19 NA BF876330 Out-of-frame Inter-chr q22.3 Transcription factor p11.2 109786 ChimerSeq ChiTaRs ChiTaRs KCNMA1-XAB2 KCNMA1 chr10 79280091 XAB2 chr19 7690976 Exonic hg19 NA BI040240 Out-of-frame Inter-chr q22.3 p13.2 109787 ChimerSeq ChiTaRs ChiTaRs MAP3K6-MAP3K6 MAP3K6 chr1 27683102 MAP3K6 chr1 27682895 Exonic hg19 NA BM759740 Out-of-frame Intra-chr p36.11 STE:STE11 p36.11 STE:STE11 109788 ChimerSeq ChiTaRs ChiTaRs ZBTB2-CBFA2T2 ZBTB2 chr6 151685359 CBFA2T2 chr20 32172842 Exonic hg19 NA DB371560 Out-of-frame Inter-chr q25.1 Transcription factor q11.21 109789 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-INS-IGF2 INS-IGF2 chr11 2153598 INS-IGF2 chr11 2152230 Exonic hg19 NA BQ361980 Out-of-frame Intra-chr p15.5 p15.5 Oncogene 109790 ChimerSeq ChiTaRs ChiTaRs SELENBP1-CHURC1 SELENBP1 chr1 151338834 CHURC1 chr14 65381176 Exonic hg19 NA AF113700 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q23.3 109791 ChimerSeq ChiTaRs ChiTaRs ATXN7L1-ATXN7L1 ATXN7L1 chr7 105256922 ATXN7L1 chr7 105256299 Exonic hg19 NA BF951750 Out-of-frame Intra-chr q22.3 q22.3 109792 ChimerSeq ChiTaRs ChiTaRs TULP4-GNB2L1 TULP4 chr6 158750509 GNB2L1 chr5 180669239 Exonic hg19 NA BU186060 Out-of-frame Inter-chr q25.3 Tumor suppressor gene 109793 ChimerSeq ChiTaRs ChiTaRs NBPF14-C1orf112 NBPF14 chr1 144836806 C1orf112 chr1 169722345 Exonic hg19 NA BQ067630 Out-of-frame Intra-chr q21.2 q24.2 109794 ChimerSeq ChiTaRs ChiTaRs KAT6A-KAT6A KAT6A chr8 41788641 KAT6A chr8 41788786 Exonic hg19 NA CA314440 Out-of-frame Intra-chr p11.21 Oncogene p11.21 Oncogene 109795 ChimerSeq ChiTaRs ChiTaRs ZFAND2A-APOL2 ZFAND2A chr7 1195107 APOL2 chr22 36633995 Exonic hg19 NA AA576860 Out-of-frame Inter-chr p22.3 q12.3 109796 ChimerSeq ChiTaRs ChiTaRs TFCP2L1-TFCP2L1 TFCP2L1 chr2 121995228 TFCP2L1 chr2 121981916 Exonic hg19 NA BF327040 Out-of-frame Intra-chr q14.2 Transcription factor q14.2 Transcription factor 109797 ChimerSeq ChiTaRs ChiTaRs SPARC-SPARC SPARC chr5 151042360 SPARC chr5 151045921 Exonic hg19 NA AI003940 3'UTR-CDS Intra-chr q33.1 Tumor suppressor gene q33.1 Tumor suppressor gene 109798 ChimerSeq ChiTaRs ChiTaRs TRIM52-ME3 TRIM52 chr5 180684253 ME3 chr11 86183556 Exonic hg19 NA BF760370 Out-of-frame Inter-chr q35.3 q14.2 109799 ChimerSeq ChiTaRs ChiTaRs PPP1R12B-PPP1R12B PPP1R12B chr1 202553393 PPP1R12B chr1 202553431 Exonic hg19 NA BF822360 Out-of-frame Intra-chr q32.1 q32.1 109800 ChimerSeq ChiTaRs ChiTaRs C9orf37-C9orf37 C9orf37 chr9 140512810 C9orf37 chr9 140513099 Exonic hg19 NA BF848290 Out-of-frame Intra-chr 109801 ChimerSeq ChiTaRs ChiTaRs DOK2-DOK2 DOK2 chr8 21766930 DOK2 chr8 21766652 Exonic hg19 NA AA864400 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.3 Tumor suppressor gene 109802 ChimerSeq ChiTaRs ChiTaRs BAG3-BAG3 BAG3 chr10 121437308 BAG3 chr10 121437063 Exonic hg19 NA CA944410 Out-of-frame Intra-chr q26.11 q26.11 109803 ChimerSeq ChiTaRs ChiTaRs CDH12-HSPD1 CDH12 chr5 21883784 HSPD1 chr2 198351308 Exonic hg19 NA BC047350 Out-of-frame Inter-chr p14.3 q33.1 Tumor suppressor gene 109804 ChimerSeq ChiTaRs ChiTaRs EIF3H-EIF3H EIF3H chr8 117723446 EIF3H chr8 117723217 Exonic hg19 NA CV398950 Out-of-frame Intra-chr q24.11 q24.11 109805 ChimerSeq ChiTaRs ChiTaRs CLIC5-CLIC5 CLIC5 chr6 45933583 CLIC5 chr6 45933838 Exonic hg19 NA BI056690 Out-of-frame Intra-chr p21.1 p21.1 109806 ChimerSeq ChiTaRs ChiTaRs SCAMP3-SCAMP3 SCAMP3 chr1 155231966 SCAMP3 chr1 155226098 Exonic hg19 NA AW837080 Out-of-frame Intra-chr 109807 ChimerSeq ChiTaRs ChiTaRs BATF3-BATF3 BATF3 chr1 212870119 BATF3 chr1 212870167 Exonic hg19 NA AW865700 Out-of-frame Intra-chr q32.3 Transcription factor q32.3 Transcription factor 109808 ChimerSeq ChiTaRs ChiTaRs WWTR1-WWTR1 WWTR1 chr3 149238653 WWTR1 chr3 149238671 Exonic hg19 NA CA311460 Out-of-frame Intra-chr q25.1 q25.1 109809 ChimerSeq ChiTaRs ChiTaRs LOC100506274-EPC2 LOC100506274 chr2 7588698 EPC2 chr2 149528720 Exonic hg19 NA BE817410 Out-of-frame Intra-chr q23.1 109810 ChimerSeq ChiTaRs ChiTaRs ITPR1-ITPR1 ITPR1 chr3 4819330 ITPR1 chr3 4819299 Exonic hg19 NA AA746880 Out-of-frame Intra-chr p26.1 p26.1 109811 ChimerSeq ChiTaRs ChiTaRs BSN-BSN BSN chr3 49706370 BSN chr3 49706105 Exonic hg19 NA T08000 Out-of-frame Intra-chr p21.31 p21.31 109812 ChimerSeq ChiTaRs ChiTaRs RIMS3-CCT7 RIMS3 chr1 41088627 CCT7 chr2 73474979 Exonic hg19 NA BI113920 Out-of-frame Inter-chr p34.2 p13.2 109813 ChimerSeq ChiTaRs ChiTaRs DEPTOR-DEPTOR DEPTOR chr8 120942393 DEPTOR chr8 120940654 Exonic hg19 NA BQ286180 Out-of-frame Intra-chr q24.12 q24.12 109814 ChimerSeq ChiTaRs ChiTaRs BASP1-ST3GAL2 BASP1 chr5 17275879 ST3GAL2 chr16 70417611 Exonic hg19 NA AW895060 Out-of-frame Inter-chr p15.1 Tumor suppressor gene q22.1 109815 ChimerSeq ChiTaRs ChiTaRs AZGP1-KLHL21 AZGP1 chr7 99564420 KLHL21 chr1 6652843 Exonic hg19 NA AI657140 Out-of-frame Inter-chr q22.1 Tumor suppressor gene p36.31 109816 ChimerSeq ChiTaRs ChiTaRs EPB41L4A-EPB41L4A EPB41L4A chr5 111569281 EPB41L4A chr5 111568565 Exonic hg19 NA AW868580 Out-of-frame Intra-chr q22.2 q22.2 109817 ChimerSeq ChiTaRs ChiTaRs RD3-RD3 RD3 chr1 211649943 RD3 chr1 211650120 Exonic hg19 NA H93740 Out-of-frame Intra-chr q32.3 q32.3 109818 ChimerSeq ChiTaRs ChiTaRs FAM83A-WDR91 FAM83A chr8 124221625 WDR91 chr7 134872296 Exonic hg19 NA AW365300 Out-of-frame Inter-chr q24.13 q33 109819 ChimerSeq ChiTaRs ChiTaRs TMEM161B-TMEM161B TMEM161B chr5 87517070 TMEM161B chr5 87514253 Exonic hg19 NA AF138860 Out-of-frame Intra-chr q14.3 q14.3 109820 ChimerSeq ChiTaRs ChiTaRs CENPH-MGAT5 CENPH chr5 68506183 MGAT5 chr2 135163960 Exonic hg19 NA AI738610 Out-of-frame Inter-chr q13.2 q21.2 109821 ChimerSeq ChiTaRs ChiTaRs CPE-GDI1 CPE chr4 166300353 GDI1 chrX 153668519 Exonic hg19 NA DA080700 Out-of-frame Inter-chr q32.3 q28 109822 ChimerSeq ChiTaRs ChiTaRs COLEC10-PKNOX1 COLEC10 chr8 120107060 PKNOX1 chr21 44450290 Exonic hg19 NA BE083950 Out-of-frame Inter-chr q24.12 q22.3 Tumor suppressor gene Transcription factor 109823 ChimerSeq ChiTaRs ChiTaRs CAMKV-CABP1 CAMKV chr3 49899839 CABP1 chr12 121098600 Exonic hg19 NA X94700 Out-of-frame Inter-chr p21.31 q24.31 109824 ChimerSeq ChiTaRs ChiTaRs HUWE1-HUWE1 HUWE1 chrX 53565952 HUWE1 chrX 53575973 Exonic hg19 NA BP231230 Out-of-frame Intra-chr p11.22 p11.22 109825 ChimerSeq ChiTaRs ChiTaRs ATHL1-ATHL1 ATHL1 chr11 294948 ATHL1 chr11 295276 Exonic hg19 NA BF881000 Out-of-frame Intra-chr 109826 ChimerSeq ChiTaRs ChiTaRs OSR2-GOLIM4 OSR2 chr8 99964323 GOLIM4 chr3 167761209 Exonic hg19 NA AA568260 Out-of-frame Inter-chr q22.2 Transcription factor q26.2 109827 ChimerSeq ChiTaRs ChiTaRs TAF6L-PRKCI TAF6L chr11 62550142 PRKCI chr3 170003962 Exonic hg19 NA BQ332890 Out-of-frame Inter-chr q12.3 q26.2 109828 ChimerSeq ChiTaRs ChiTaRs FNBP1-FNBP1 FNBP1 chr9 132713116 FNBP1 chr9 132705328 Exonic hg19 NA BQ346800 Out-of-frame Intra-chr q34.11 q34.11 109829 ChimerSeq ChiTaRs ChiTaRs TRRAP-BTBD9 TRRAP chr7 98564643 BTBD9 chr6 38299240 Exonic hg19 NA CV418360 Out-of-frame Inter-chr q22.1 Atypical:PIKK Oncogene p21.2 109830 ChimerSeq ChiTaRs ChiTaRs CNNM3-CNNM3 CNNM3 chr2 97499141 CNNM3 chr2 97499138 Exonic hg19 NA AA229290 Out-of-frame Intra-chr q11.2 q11.2 109831 ChimerSeq ChiTaRs ChiTaRs CREB3L2-PCM1 CREB3L2 chr7 137561684 PCM1 chr8 17869176 Exonic hg19 NA BF369730 Out-of-frame Inter-chr q33 Transcription factor p22 109832 ChimerSeq ChiTaRs ChiTaRs PRRC2B-PRRC2B PRRC2B chr9 134375578 PRRC2B chr9 134373420 Exonic hg19 NA BC058910 Out-of-frame Intra-chr q34.13 q34.13 109833 ChimerSeq ChiTaRs ChiTaRs QARS-QARS QARS chr3 49137454 QARS chr3 49136649 Exonic hg19 NA BE828390 Out-of-frame Intra-chr p21.31 p21.31 109834 ChimerSeq ChiTaRs ChiTaRs LANCL2-LANCL2 LANCL2 chr7 55500506 LANCL2 chr7 55500823 Exonic hg19 NA BF814820 Out-of-frame Intra-chr p11.2 p11.2 109835 ChimerSeq ChiTaRs ChiTaRs CAV2-FAM13B CAV2 chr7 116139491 FAM13B chr5 137284834 Exonic hg19 NA DB285980 Out-of-frame Inter-chr q31.2 q31.2 109836 ChimerSeq ChiTaRs ChiTaRs HNRNPU-C8orf34 HNRNPU chr1 245013776 C8orf34 chr8 69469780 Exonic hg19 NA AW081080 Out-of-frame Inter-chr q44 q13.2 109837 ChimerSeq ChiTaRs ChiTaRs ZKSCAN1-SNAPC5 ZKSCAN1 chr7 99633738 SNAPC5 chr15 66785028 Exonic hg19 NA BM457580 Out-of-frame Inter-chr q22.1 Transcription factor q22.31 Transcription factor 109838 ChimerSeq ChiTaRs ChiTaRs SGMS1-TUBGCP2 SGMS1 chr10 52066823 TUBGCP2 chr10 135098969 Exonic hg19 NA BF917180 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q26.3 109839 ChimerSeq ChiTaRs ChiTaRs MYC-BZRAP1-AS1 MYC chr8 128750038 BZRAP1-AS1 chr17 56408100 Exonic hg19 NA AB213412 Out-of-frame Inter-chr q24.21 Oncogene Transcription factor 109840 ChimerSeq ChiTaRs ChiTaRs NUCB2-NUCB2 NUCB2 chr11 17332484 NUCB2 chr11 17323342 Exonic hg19 NA CA311500 Out-of-frame Intra-chr p15.1 p15.1 109841 ChimerSeq ChiTaRs ChiTaRs EIF3A-LRRFIP1 EIF3A chr10 120816354 LRRFIP1 chr2 238671873 Exonic hg19 NA BF752470 Out-of-frame Inter-chr q26.11 q37.3 109842 ChimerSeq ChiTaRs ChiTaRs SSBP3-GADL1 SSBP3 chr1 54865574 GADL1 chr3 30824318 Exonic hg19 NA CV411220 Out-of-frame Inter-chr p32.3 p23 109843 ChimerSeq ChiTaRs ChiTaRs FAM160A1-FAM160A1 FAM160A1 chr4 152538463 FAM160A1 chr4 152538448 Exonic hg19 NA AI005350 Out-of-frame Intra-chr q31.3 q31.3 109844 ChimerSeq ChiTaRs ChiTaRs AGBL5-CHD5 AGBL5 chr2 27277662 CHD5 chr1 6214740 Exonic hg19 NA BF363390 Out-of-frame Inter-chr p23.3 p36.31 Tumor suppressor gene 109845 ChimerSeq ChiTaRs ChiTaRs UST-ACVR1 UST chr6 149332799 ACVR1 chr2 158695222 Exonic hg19 NA BF873230 Out-of-frame Inter-chr q25.1 q24.1 109846 ChimerSeq ChiTaRs ChiTaRs EFEMP1-HSPA1A EFEMP1 chr2 56093809 HSPA1A chr6 3079167 Exonic hg19 NA D57450 Out-of-frame Inter-chr p16.1 109847 ChimerSeq ChiTaRs ChiTaRs GNL3L-GNL3L GNL3L chrX 54588333 GNL3L chrX 54588320 Exonic hg19 NA BE890790 Out-of-frame Intra-chr p11.22 p11.22 109848 ChimerSeq ChiTaRs ChiTaRs PBLD-PBLD PBLD chr10 70091927 PBLD chr10 70091940 Exonic hg19 NA L32610 Out-of-frame Intra-chr q21.3 q21.3 109849 ChimerSeq ChiTaRs ChiTaRs CYB561A3-LRRC58 CYB561A3 chr11 61128203 LRRC58 chr3 120046418 Exonic hg19 NA AW262920 Out-of-frame Inter-chr q12.2 q13.33 109850 ChimerSeq ChiTaRs ChiTaRs RAD17-ASPH RAD17 chr5 68696856 ASPH chr8 62559750 Exonic hg19 NA CD674690 Out-of-frame Inter-chr q12.3 109851 ChimerSeq ChiTaRs ChiTaRs UMPS-UMPS UMPS chr3 124460256 UMPS chr3 124459205 Exonic hg19 NA DW427610 Out-of-frame Intra-chr q21.2 q21.2 109852 ChimerSeq ChiTaRs ChiTaRs PTK2-BSN PTK2 chr8 141829093 BSN chr3 49695029 Exonic hg19 NA BE699810 Out-of-frame Inter-chr q24.3 p21.31 109853 ChimerSeq ChiTaRs ChiTaRs GPR107-CLIP4 GPR107 chr9 132902378 CLIP4 chr2 29406581 Exonic hg19 NA DR979510 Out-of-frame Inter-chr q34.11 p23.2 109854 ChimerSeq ChiTaRs ChiTaRs TXNDC12-FAM107B TXNDC12 chr1 52499989 FAM107B chr10 14615836 Exonic hg19 NA BF910530 Out-of-frame Inter-chr p32.3 p13 109855 ChimerSeq ChiTaRs ChiTaRs CANX-CANX CANX chr5 179157926 CANX chr5 179157392 Exonic hg19 NA CB242580 Out-of-frame Intra-chr 109856 ChimerSeq ChiTaRs ChiTaRs RABEPK-RABEPK RABEPK chr9 127994944 RABEPK chr9 127994946 Exonic hg19 NA BF205330 Out-of-frame Intra-chr q33.3 q33.3 109857 ChimerSeq ChiTaRs ChiTaRs H19-H19 H19 chr11 2019002 H19 chr11 2016941 Exonic hg19 NA BE146050 Out-of-frame Intra-chr p15.5 Tumor suppressor gene p15.5 Tumor suppressor gene 109858 ChimerSeq ChiTaRs ChiTaRs MAPK10-COL1A2 MAPK10 chr4 87248687 COL1A2 chr7 94059837 Exonic hg19 NA W60850 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q21.3 109859 ChimerSeq ChiTaRs ChiTaRs AASDH-KIAA1211 AASDH chr4 57253633 KIAA1211 chr4 57189543 Exonic hg19 NA DA411740 Out-of-frame Intra-chr q12 q12 109860 ChimerSeq ChiTaRs ChiTaRs ADAT2-COBLL1 ADAT2 chr6 143749047 COBLL1 chr2 165671098 Exonic hg19 NA BF986060 Out-of-frame Inter-chr q24.2 q24.3 109861 ChimerSeq ChiTaRs ChiTaRs KIT-MAATS1 KIT chr4 55564731 MAATS1 chr3 119467986 Exonic hg19 NA DN993363 Out-of-frame Inter-chr q12 TK:PDGFR Oncogene q13.33 109862 ChimerSeq ChiTaRs ChiTaRs SNAPC3-C21orf7 SNAPC3 chr9 15464901 C21orf7 chr21 30502687 Exonic hg19 NA CB267900 Out-of-frame Inter-chr p22.3 109863 ChimerSeq ChiTaRs ChiTaRs ORC5-SHC3 ORC5 chr7 103801559 SHC3 chr9 91650493 Exonic hg19 NA AW904020 Out-of-frame Inter-chr q22.2 q22.1 109864 ChimerSeq ChiTaRs ChiTaRs ATP1A1-ATP1A1 ATP1A1 chr1 116939345 ATP1A1 chr1 116935493 Exonic hg19 NA BQ312200 Out-of-frame Intra-chr p13.1 p13.1 109865 ChimerSeq ChiTaRs ChiTaRs NOP58-NAMPT NOP58 chr2 203142907 NAMPT chr7 105913009 Exonic hg19 NA DA677790 Out-of-frame Inter-chr q33.1 q22.3 109866 ChimerSeq ChiTaRs ChiTaRs CYP4B1-CYP4B1 CYP4B1 chr1 47285019 CYP4B1 chr1 47284751 Exonic hg19 NA BM968720 Out-of-frame Intra-chr p33 p33 109867 ChimerSeq ChiTaRs ChiTaRs HNRNPA2B1-PTMA HNRNPA2B1 chr7 26236639 PTMA chr2 232576616 Exonic hg19 NA BU153710 Out-of-frame Inter-chr p15.2 q37.1 109868 ChimerSeq ChiTaRs ChiTaRs PTPRG-PTPRG PTPRG chr3 62192282 PTPRG chr3 62191902 Exonic hg19 NA BF821950 Out-of-frame Intra-chr p14.2 p14.2 109869 ChimerSeq ChiTaRs ChiTaRs SFPQ-SFPQ SFPQ chr1 35656512 SFPQ chr1 35654603 Exonic hg19 NA BE408250 Out-of-frame Intra-chr p34.3 p34.3 109870 ChimerSeq ChiTaRs ChiTaRs GUSBP2-LRRC16A GUSBP2 chr6 26846502 LRRC16A chr6 25604421 Exonic hg19 NA AK025150 Out-of-frame Intra-chr p22.2 109871 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-IPO9 INS-IGF2 chr11 2153903 IPO9 chr1 201845677 Exonic hg19 NA AW409890 Out-of-frame Inter-chr p15.5 q32.1 Oncogene 109872 ChimerSeq ChiTaRs ChiTaRs MAFIP-TUBB MAFIP chr4 81300 TUBB chr6 2024520 Exonic hg19 NA BF816530 Out-of-frame Inter-chr 109873 ChimerSeq ChiTaRs ChiTaRs SERP1-SRPK2 SERP1 chr3 150263938 SRPK2 chr7 104773523 Exonic hg19 NA BQ183150 Out-of-frame Inter-chr q25.1 q22.3 CMGC:SRPK 109874 ChimerSeq ChiTaRs ChiTaRs PSAP-PSAP PSAP chr10 73588678 PSAP chr10 73576985 Exonic hg19 NA BE930210 Out-of-frame Intra-chr q22.1 q22.1 109875 ChimerSeq ChiTaRs ChiTaRs FILIP1-FILIP1 FILIP1 chr6 76023192 FILIP1 chr6 76063362 Exonic hg19 NA AA092810 Out-of-frame Intra-chr q14.1 q14.1 109876 ChimerSeq ChiTaRs ChiTaRs LRBA-LRBA LRBA chr4 151816471 LRBA chr4 151762051 Exonic hg19 NA AW991980 Out-of-frame Intra-chr q31.3 q31.3 109877 ChimerSeq ChiTaRs ChiTaRs AFAP1L2-AFAP1L2 AFAP1L2 chr10 116062143 AFAP1L2 chr10 116060379 Exonic hg19 NA Z42720 Out-of-frame Intra-chr q25.3 Tumor suppressor gene q25.3 Tumor suppressor gene 109878 ChimerSeq ChiTaRs ChiTaRs DEFA1-APOA2 DEFA1 chr8 6856718 APOA2 chr1 161192236 Exonic hg19 NA AI064980 Out-of-frame Inter-chr p23.1 q23.3 109879 ChimerSeq ChiTaRs ChiTaRs ZFAND2B-ZFAND2B ZFAND2B chr2 220074361 ZFAND2B chr2 220073150 Exonic hg19 NA AW968850 Out-of-frame Intra-chr q35 q35 109880 ChimerSeq ChiTaRs ChiTaRs RNF122-DENND2A RNF122 chr8 33418306 DENND2A chr7 140240815 Exonic hg19 NA AA226620 Out-of-frame Inter-chr p12 q34 109881 ChimerSeq ChiTaRs ChiTaRs DENND4B-DENND4B DENND4B chr1 153902256 DENND4B chr1 153902538 Exonic hg19 NA W23080 Out-of-frame Intra-chr q21.3 q21.3 109882 ChimerSeq ChiTaRs ChiTaRs NSMCE2-MKRN2 NSMCE2 chr8 126200449 MKRN2 chr3 12605932 Exonic hg19 NA BE082940 Out-of-frame Inter-chr q24.13 p25.2 109883 ChimerSeq ChiTaRs ChiTaRs PHYHD1-LRRC8A PHYHD1 chr9 131689477 LRRC8A chr9 131669434 Exonic hg19 NA AI879160 Out-of-frame Intra-chr q34.11 q34.11 Seq+ 109884 ChimerSeq ChiTaRs ChiTaRs NRXN1-PPP2R2B NRXN1 chr2 50268410 PPP2R2B chr5 146220550 Exonic hg19 NA T07730 Out-of-frame Inter-chr p16.3 q32 109885 ChimerSeq ChiTaRs ChiTaRs UBA1-SGSM2 UBA1 chrX 47052064 SGSM2 chr17 2280675 Exonic hg19 NA BC040590 Out-of-frame Inter-chr p11.3 p13.3 Transcription factor 109886 ChimerSeq ChiTaRs ChiTaRs USF1-USF1 USF1 chr1 161009339 USF1 chr1 161009111 Exonic hg19 NA BI001640 Out-of-frame Intra-chr q23.3 Transcription factor q23.3 Transcription factor 109887 ChimerSeq ChiTaRs ChiTaRs CERCAM-PPP1R9B CERCAM chr9 131190654 PPP1R9B chr17 48218677 Exonic hg19 NA BI016240 Out-of-frame Inter-chr q34.11 q21.33 109888 ChimerSeq ChiTaRs ChiTaRs NFIB-SREK1 NFIB chr9 14296126 SREK1 chr5 65475853 Exonic hg19 NA BE172450 Out-of-frame Inter-chr p22.3 Transcription factor q12.3 109889 ChimerSeq ChiTaRs ChiTaRs DPYSL2-RGS3 DPYSL2 chr8 26514876 RGS3 chr9 116305980 Exonic hg19 NA BF963110 Out-of-frame Inter-chr p21.2 q32 109890 ChimerSeq ChiTaRs ChiTaRs ABLIM1-AMBRA1 ABLIM1 chr10 116445474 AMBRA1 chr11 46430065 Exonic hg19 NA BG984350 Out-of-frame Inter-chr q25.3 p11.2 109891 ChimerSeq ChiTaRs ChiTaRs TIAL1-NCLN TIAL1 chr10 121356142 NCLN chr19 3207188 Exonic hg19 NA CA489220 Out-of-frame Inter-chr q26.11 p13.3 109892 ChimerSeq ChiTaRs ChiTaRs KIAA1211-KIAA1211 KIAA1211 chr4 57193881 KIAA1211 chr4 57193869 Exonic hg19 NA BE892820 Out-of-frame Intra-chr q12 q12 109893 ChimerSeq ChiTaRs ChiTaRs TRIO-TMOD1 TRIO chr5 14509519 TMOD1 chr9 100286446 Exonic hg19 NA CA843090 Out-of-frame Inter-chr p15.2 q22.33 109894 ChimerSeq ChiTaRs ChiTaRs MAST2-MAST2 MAST2 chr1 46489616 MAST2 chr1 46489589 Exonic hg19 NA AL040960 Out-of-frame Intra-chr p34.1 AGC:MAST p34.1 AGC:MAST 109895 ChimerSeq ChiTaRs ChiTaRs CCRN4L-CRLF3 CCRN4L chr4 139959711 CRLF3 chr17 29110250 Exonic hg19 NA BQ084450 Out-of-frame Inter-chr q11.2 109896 ChimerSeq ChiTaRs ChiTaRs SOX6-DDOST SOX6 chr11 16249490 DDOST chr1 20978812 Exonic hg19 NA AW411410 Out-of-frame Inter-chr p15.2 Transcription factor p36.12 109897 ChimerSeq ChiTaRs ChiTaRs FLNB-FLNB FLNB chr3 58104712 FLNB chr3 58107015 Exonic hg19 NA AI905910 Out-of-frame Intra-chr p14.3 p14.3 109898 ChimerSeq ChiTaRs ChiTaRs POLR3C-POLR3C POLR3C chr1 145606165 POLR3C chr1 145606173 Exonic hg19 NA BF335120 Out-of-frame Intra-chr q21.1 q21.1 109899 ChimerSeq ChiTaRs ChiTaRs ZNF623-ZNF623 ZNF623 chr8 144734451 ZNF623 chr8 144734841 Exonic hg19 NA BI001400 Out-of-frame Intra-chr Transcription factor Transcription factor 109900 ChimerSeq ChiTaRs ChiTaRs FLNB-MUC12 FLNB chr3 58116524 MUC12 chr7 100634934 Exonic hg19 NA BG955820 Out-of-frame Inter-chr p14.3 q22.1 109901 ChimerSeq ChiTaRs ChiTaRs BAZ2B-PRKAA1 BAZ2B chr2 160284931 PRKAA1 chr5 40776976 Exonic hg19 NA BQ347750 Out-of-frame Inter-chr q24.2 Transcription factor p13.1 Tumor suppressor gene 109902 ChimerSeq ChiTaRs ChiTaRs ALDH7A1-UBAP1 ALDH7A1 chr5 125885898 UBAP1 chr9 34224507 Exonic hg19 NA AA165440 Out-of-frame Inter-chr q23.2 p13.3 109903 ChimerSeq ChiTaRs ChiTaRs RAB7A-IL10RB RAB7A chr3 128445201 IL10RB chr21 34637311 Exonic hg19 NA BE673930 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q22.11 109904 ChimerSeq ChiTaRs ChiTaRs KIAA2018-KIAA2018 KIAA2018 chr3 113374156 KIAA2018 chr3 113370858 Exonic hg19 NA DB011310 Out-of-frame Intra-chr 109905 ChimerSeq ChiTaRs ChiTaRs LRRC58-LRRC58 LRRC58 chr3 120046693 LRRC58 chr3 120046707 Exonic hg19 NA CN479300 Out-of-frame Intra-chr q13.33 q13.33 109906 ChimerSeq ChiTaRs ChiTaRs MACF1-PHF14 MACF1 chr1 39768918 PHF14 chr7 11161766 Exonic hg19 NA BE149930 Out-of-frame Inter-chr p34.3 p21.3 109907 ChimerSeq ChiTaRs ChiTaRs DPP10-RAB10 DPP10 chr2 115276906 RAB10 chr2 26340621 Exonic hg19 NA CV425580 Out-of-frame Intra-chr q14.1 p23.3 109908 ChimerSeq ChiTaRs ChiTaRs SORBS2-CKB SORBS2 chr4 186510383 CKB chr14 103988193 Exonic hg19 NA BQ057560 Out-of-frame Inter-chr q35.1 q32.33 109909 ChimerSeq ChiTaRs ChiTaRs RASAL2-RASAL2 RASAL2 chr1 178136153 RASAL2 chr1 178137786 Exonic hg19 NA DN917460 Out-of-frame Intra-chr q25.2 Tumor suppressor gene q25.2 Tumor suppressor gene 109910 ChimerSeq ChiTaRs ChiTaRs ZNF511-EZR ZNF511 chr10 135138989 EZR chr6 159210341 Exonic hg19 NA M85430 Out-of-frame Inter-chr q26.3 Transcription factor q25.3 109911 ChimerSeq ChiTaRs ChiTaRs CAPZB-SPSB1 CAPZB chr1 19666594 SPSB1 chr1 9429224 Exonic hg19 NA BG979990 Out-of-frame Intra-chr p36.13 p36.22 109912 ChimerSeq ChiTaRs ChiTaRs BSCL2-RPL22L1 BSCL2 chr11 62473090 RPL22L1 chr3 170584108 Exonic hg19 NA BG823360 Out-of-frame Inter-chr q12.3 q26.2 109913 ChimerSeq ChiTaRs ChiTaRs KIF1A-DCAF13 KIF1A chr2 241737231 DCAF13 chr8 104444394 Exonic hg19 NA X90840 Out-of-frame Inter-chr q37.3 q22.3 109914 ChimerSeq ChiTaRs ChiTaRs ECHDC3-ECHDC3 ECHDC3 chr10 11805943 ECHDC3 chr10 11805925 Exonic hg19 NA BI254560 Out-of-frame Intra-chr p14 p14 109915 ChimerSeq ChiTaRs ChiTaRs DCAF8-DCAF8 DCAF8 chr1 160248659 DCAF8 chr1 160248805 Exonic hg19 NA BI963970 Out-of-frame Intra-chr q23.2 q23.2 109916 ChimerSeq ChiTaRs ChiTaRs GABRE-GABRE GABRE chrX 151122871 GABRE chrX 151122491 Exonic hg19 NA BI060530 Out-of-frame Intra-chr q28 q28 109917 ChimerSeq ChiTaRs ChiTaRs IGSF1-GPR39 IGSF1 chrX 130409183 GPR39 chr2 133402246 Exonic hg19 NA AV727120 Out-of-frame Inter-chr q26.2 q21.2 109918 ChimerSeq ChiTaRs ChiTaRs TNPO1-ZFP106 TNPO1 chr5 72185255 ZFP106 chr15 42707674 Exonic hg19 NA BQ338570 Out-of-frame Inter-chr q13.2 109919 ChimerSeq ChiTaRs ChiTaRs SETD2-PIPOX SETD2 chr3 47139652 PIPOX chr17 27382101 Exonic hg19 NA AA704520 Out-of-frame Inter-chr p21.31 Oncogene Tumor suppressor gene q11.2 109920 ChimerSeq ChiTaRs ChiTaRs RPS6-IVL RPS6 chr9 19378762 IVL chr1 152884030 Exonic hg19 NA BF843060 Out-of-frame Inter-chr p22.1 q21.3 109921 ChimerSeq ChiTaRs ChiTaRs REST-CNOT1 REST chr4 57800857 CNOT1 chr16 58559926 Exonic hg19 NA U22680 Out-of-frame Inter-chr q12 Transcription factor q21 109922 ChimerSeq ChiTaRs ChiTaRs AKAP2-NR4A1 AKAP2 chr9 112900113 NR4A1 chr12 52449648 Exonic hg19 NA AW952990 Out-of-frame Inter-chr q31.3 q13.13 Tumor suppressor gene Transcription factor 109923 ChimerSeq ChiTaRs ChiTaRs TMCC1-TMCC1 TMCC1 chr3 129443084 TMCC1 chr3 129443112 Exonic hg19 NA CX786450 Out-of-frame Intra-chr q22.1 q22.1 109924 ChimerSeq ChiTaRs ChiTaRs UBR3-SYT7 UBR3 chr2 170750106 SYT7 chr11 61282990 Exonic hg19 NA BP391060 Out-of-frame Inter-chr q31.1 q12.2 109925 ChimerSeq ChiTaRs ChiTaRs GNB1-GNB1 GNB1 chr1 1717106 GNB1 chr1 1717101 Exonic hg19 NA AA651630 Out-of-frame Intra-chr p36.33 p36.33 109926 ChimerSeq ChiTaRs ChiTaRs ADAM12-ACIN1 ADAM12 chr10 127804180 ACIN1 chr14 23549585 Exonic hg19 NA BI049580 Out-of-frame Inter-chr q26.2 q11.2 109927 ChimerSeq ChiTaRs ChiTaRs HLA-E-NR2C2 HLA-E chr6 1793307 NR2C2 chr3 15045081 Exonic hg19 NA BG399500 Out-of-frame Inter-chr p25.1 109928 ChimerSeq ChiTaRs ChiTaRs PIKFYVE-SMR3B PIKFYVE chr2 209186753 SMR3B chr4 71255597 Exonic hg19 NA BX640810 Out-of-frame Inter-chr q34 q13.3 109929 ChimerSeq ChiTaRs ChiTaRs PROM2-PROM2 PROM2 chr2 95945879 PROM2 chr2 95945666 Exonic hg19 NA CV326900 Out-of-frame Intra-chr q11.1 q11.1 109930 ChimerSeq ChiTaRs ChiTaRs NGLY1-RPL3 NGLY1 chr3 25775506 RPL3 chr22 39713058 Exonic hg19 NA AW999090 Out-of-frame Inter-chr p24.2 q13.1 109931 ChimerSeq ChiTaRs ChiTaRs CIAO1-CIAO1 CIAO1 chr2 96934259 CIAO1 chr2 96934229 Exonic hg19 NA BF313490 Out-of-frame Intra-chr q11.2 q11.2 109932 ChimerSeq ChiTaRs ChiTaRs MOV10-MOV10 MOV10 chr1 113232652 MOV10 chr1 113232666 Exonic hg19 NA AI752780 Out-of-frame Intra-chr p13.2 p13.2 109933 ChimerSeq ChiTaRs ChiTaRs FREM1-FREM1 FREM1 chr9 14746467 FREM1 chr9 14746380 Exonic hg19 NA AL045520 Out-of-frame Intra-chr p22.3 p22.3 109934 ChimerSeq ChiTaRs ChiTaRs IQCJ-SCHIP1-FEZ1 IQCJ-SCHIP1 chr3 159246333 FEZ1 chr11 125322275 Exonic hg19 NA BQ347180 Out-of-frame Inter-chr q25.32 q24.2 109935 ChimerSeq ChiTaRs ChiTaRs FGR-SQSTM1 FGR chr1 27943444 SQSTM1 chr5 179251068 Exonic hg19 NA BG314620 Out-of-frame Inter-chr p35.3 TK:Src q35.3 109936 ChimerSeq ChiTaRs ChiTaRs RADIL-STXBP2 RADIL chr7 4859337 STXBP2 chr19 7710534 Exonic hg19 NA BI028780 Out-of-frame Inter-chr p22.1 p13.2 109937 ChimerSeq ChiTaRs ChiTaRs TMEM158-CELF2 TMEM158 chr3 45266298 CELF2 chr10 11076115 Exonic hg19 NA T07230 Out-of-frame Inter-chr p21.31 p14 109938 ChimerSeq ChiTaRs ChiTaRs FIP1L1-ASIC2 FIP1L1 chr4 54316420 ASIC2 chr17 31940156 Exonic hg19 NA AA283865 Out-of-frame Inter-chr q12 q12 109939 ChimerSeq ChiTaRs ChiTaRs TF-TTL TF chr3 133485171 TTL chr2 113280709 Exonic hg19 NA BE766500 Out-of-frame Inter-chr q22.1 q14.1 109940 ChimerSeq ChiTaRs ChiTaRs ARHGAP29-HACL1 ARHGAP29 chr1 94649563 HACL1 chr3 15594990 Exonic hg19 NA AW837060 Out-of-frame Inter-chr p22.1 Tumor suppressor gene p25.1 109941 ChimerSeq ChiTaRs ChiTaRs RUNX1T1-MALAT1 RUNX1T1 chr8 93009006 MALAT1 chr11 65267653 Exonic hg19 NA EY123355 Out-of-frame Inter-chr q21.3 Oncogene q13.1 109942 ChimerSeq ChiTaRs ChiTaRs RPLP2-LRRC32 RPLP2 chr11 811644 LRRC32 chr11 76368671 Exonic hg19 NA AW882330 Out-of-frame Intra-chr p15.5 q13.5 109943 ChimerSeq ChiTaRs ChiTaRs COPS7B-MBNL2 COPS7B chr2 232673001 MBNL2 chr13 97980584 Exonic hg19 NA AW367900 Out-of-frame Inter-chr q37.1 q32.1 Transcription factor 109944 ChimerSeq ChiTaRs ChiTaRs ERICH1-ERICH1 ERICH1 chr8 623493 ERICH1 chr8 623848 Exonic hg19 NA BG564010 Out-of-frame Intra-chr 109945 ChimerSeq ChiTaRs ChiTaRs NFIA-RYR2 NFIA chr1 61717886 RYR2 chr1 237927713 Exonic hg19 NA BX479190 Out-of-frame Intra-chr p31.3 Transcription factor q43 109946 ChimerSeq ChiTaRs ChiTaRs STX17-BIRC5 STX17 chr9 102734584 BIRC5 chr17 76212763 Exonic hg19 NA AA600810 Out-of-frame Inter-chr q31.1 q25.3 Oncogene 109947 ChimerSeq ChiTaRs ChiTaRs CDK14-HS3ST4 CDK14 chr7 90838952 HS3ST4 chr16 25847926 Exonic hg19 NA T05820 Out-of-frame Inter-chr q21.13 p12.1 109948 ChimerSeq ChiTaRs ChiTaRs YTHDC1-YTHDC1 YTHDC1 chr4 9276 YTHDC1 chr4 9267 Exonic hg19 NA CA310690 Out-of-frame Intra-chr 109949 ChimerSeq ChiTaRs ChiTaRs DCP1A-DCP1A DCP1A chr3 53381554 DCP1A chr3 53353434 Exonic hg19 NA BQ277160 Out-of-frame Intra-chr p21.1 p21.1 109950 ChimerSeq ChiTaRs ChiTaRs VGLL4-HILPDA VGLL4 chr3 11723489 HILPDA chr7 128097482 Exonic hg19 NA BE080110 Out-of-frame Inter-chr p25.2 q32.1 109951 ChimerSeq ChiTaRs ChiTaRs EIF3M-SYNCRIP EIF3M chr11 32624019 SYNCRIP chr6 86328579 Exonic hg19 NA BC019360 Out-of-frame Inter-chr p13 q14.3 109952 ChimerSeq ChiTaRs ChiTaRs CARD11-ITGA11 CARD11 chr7 2945832 ITGA11 chr15 68609658 Exonic hg19 NA AW339880 Out-of-frame Inter-chr p22.2 Oncogene q23 109953 ChimerSeq ChiTaRs ChiTaRs SND1-SMURF2 SND1 chr7 127635667 SMURF2 chr17 62559552 Exonic hg19 NA M78490 Out-of-frame Inter-chr q32.1 q24.1 109954 ChimerSeq ChiTaRs ChiTaRs UCHL1-YARS2 UCHL1 chr4 41270446 YARS2 chr12 32908652 Exonic hg19 NA AW075450 3'UTR-CDS Inter-chr p13 Tumor suppressor gene p11.21 109955 ChimerSeq ChiTaRs ChiTaRs EBF1-ACTG1 EBF1 chr5 158302983 ACTG1 chr17 79477760 Exonic hg19 NA AU118850 Out-of-frame Inter-chr q33.3 Transcription factor q25.3 109956 ChimerSeq ChiTaRs ChiTaRs IGFBP5-ARHGEF10L IGFBP5 chr2 217538315 ARHGEF10L chr1 18020516 Exonic hg19 NA BF855370 Out-of-frame Inter-chr q35 Tumor suppressor gene p36.13 109957 ChimerSeq ChiTaRs ChiTaRs ARID1A-ARID1A ARID1A chr1 27105691 ARID1A chr1 27105286 Exonic hg19 NA BF759670 Out-of-frame Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 Oncogene Tumor suppressor gene 109958 ChimerSeq ChiTaRs ChiTaRs SH3PXD2A-UTRN SH3PXD2A chr10 105399788 UTRN chr6 144768387 Exonic hg19 NA BI059240 Out-of-frame Inter-chr q24.33 q24.2 109959 ChimerSeq ChiTaRs ChiTaRs KIFC2-POMP KIFC2 chr8 145699284 POMP chr13 29236778 Exonic hg19 NA AI797560 Out-of-frame Inter-chr q24.3 q12.3 109960 ChimerSeq ChiTaRs ChiTaRs HNF4G-AFM HNF4G chr8 76327933 AFM chr4 74347463 Exonic hg19 NA L32140 Out-of-frame Inter-chr q21.13 Transcription factor q13.3 109961 ChimerSeq ChiTaRs ChiTaRs PVT1-SCCPDH PVT1 chr8 129000905 SCCPDH chr1 246890199 Exonic hg19 NA BG474720 Out-of-frame Inter-chr q24.21 q44 109962 ChimerSeq ChiTaRs ChiTaRs MDM4-MDM4 MDM4 chr1 204525522 MDM4 chr1 204519508 Exonic hg19 NA DA013430 Out-of-frame Intra-chr q32.1 Oncogene q32.1 Oncogene 109963 ChimerSeq ChiTaRs ChiTaRs LIMS1-RNF185 LIMS1 chr2 109205075 RNF185 chr22 31562886 Exonic hg19 NA BX644470 Out-of-frame Inter-chr q12.3 q12.2 109964 ChimerSeq ChiTaRs ChiTaRs CSRP1-CSRP1 CSRP1 chr1 201453170 CSRP1 chr1 201453184 Exonic hg19 NA BF870360 Out-of-frame Intra-chr q32.1 q32.1 109965 ChimerSeq ChiTaRs ChiTaRs OXNAD1-OXNAD1 OXNAD1 chr3 16343213 OXNAD1 chr3 16327020 Exonic hg19 NA AW901160 Out-of-frame Intra-chr p25.1 p25.1 109966 ChimerSeq ChiTaRs ChiTaRs KCNIP4-KIF1A KCNIP4 chr4 20877007 KIF1A chr2 241713790 Exonic hg19 NA U73665 Out-of-frame Inter-chr p15.2 q37.3 109967 ChimerSeq ChiTaRs ChiTaRs NOLC1-SHROOM3 NOLC1 chr10 103920807 SHROOM3 chr4 77675904 Exonic hg19 NA AA643680 Out-of-frame Inter-chr q24.32 q21.1 109968 ChimerSeq ChiTaRs ChiTaRs EPB41L4A-EPB41L4A EPB41L4A chr5 111560664 EPB41L4A chr5 111567126 Exonic hg19 NA BX113600 Out-of-frame Intra-chr q22.2 q22.2 109969 ChimerSeq ChiTaRs ChiTaRs KIAA1841-DDX58 KIAA1841 chr2 61350941 DDX58 chr9 32493146 Exonic hg19 NA CN274890 Out-of-frame Inter-chr p15 p21.1 Tumor suppressor gene 109970 ChimerSeq ChiTaRs ChiTaRs ATIC-NAB1 ATIC chr2 216182957 NAB1 chr2 191518452 Exonic hg19 NA DB224490 Out-of-frame Intra-chr q35 q32.2 109971 ChimerSeq ChiTaRs ChiTaRs STXBP5-STXBP5 STXBP5 chr6 147560363 STXBP5 chr6 147646170 Exonic hg19 NA BG006700 Out-of-frame Intra-chr q24.3 q24.3 109972 ChimerSeq ChiTaRs ChiTaRs NRK-NRK NRK chrX 105109968 NRK chrX 105109300 Exonic hg19 NA AL036710 Out-of-frame Intra-chr q22.3 STE:STE20 q22.3 STE:STE20 109973 ChimerSeq ChiTaRs ChiTaRs UHRF2-PUM2 UHRF2 chr9 6506162 PUM2 chr2 20451337 Exonic hg19 NA BE697670 Out-of-frame Inter-chr p24.1 Tumor suppressor gene p24.1 109974 ChimerSeq ChiTaRs ChiTaRs CDH17-BICD1 CDH17 chr8 95140122 BICD1 chr12 32332501 Exonic hg19 NA AA045860 Out-of-frame Inter-chr q22.1 Tumor suppressor gene p11.21 109975 ChimerSeq ChiTaRs ChiTaRs FAM105A-FAM105A FAM105A chr5 14601748 FAM105A chr5 14601099 Exonic hg19 NA BQ027700 Out-of-frame Intra-chr p15.2 p15.2 109976 ChimerSeq ChiTaRs ChiTaRs TOMM70A-TOMM70A TOMM70A chr3 100082887 TOMM70A chr3 100082344 Exonic hg19 NA BG288930 Out-of-frame Intra-chr 109977 ChimerSeq ChiTaRs ChiTaRs LCK-LCK LCK chr1 32740650 LCK chr1 32716918 Exonic hg19 NA AI817225 Out-of-frame Intra-chr p35.2 TK:Src Oncogene p35.2 TK:Src Oncogene 109978 ChimerSeq ChiTaRs ChiTaRs SURF4-SURF4 SURF4 chr9 136228773 SURF4 chr9 136228348 Exonic hg19 NA BG403370 Out-of-frame Intra-chr 109979 ChimerSeq ChiTaRs ChiTaRs EIF3A-SFXN4 EIF3A chr10 120840327 SFXN4 chr10 120900729 Exonic hg19 NA BM771430 Out-of-frame Intra-chr q26.11 q26.11 109980 ChimerSeq ChiTaRs ChiTaRs USP13-USP13 USP13 chr3 179452742 USP13 chr3 179452319 Exonic hg19 NA BF369940 Out-of-frame Intra-chr q26.33 q26.33 109981 ChimerSeq ChiTaRs ChiTaRs NOL6-NOL6 NOL6 chr9 33462305 NOL6 chr9 33461762 Exonic hg19 NA AA292150 Out-of-frame Intra-chr p13.3 p13.3 109982 ChimerSeq ChiTaRs ChiTaRs RNF149-MYO6 RNF149 chr2 101903520 MYO6 chr6 76497754 Exonic hg19 NA DN916170 Out-of-frame Inter-chr q11.2 q14.1 109983 ChimerSeq ChiTaRs ChiTaRs ALB-APP ALB chr4 74286971 APP chr21 27354655 Exonic hg19 NA AW072570 Out-of-frame Inter-chr q13.3 q21.3 109984 ChimerSeq ChiTaRs ChiTaRs SMC5-SMC5 SMC5 chr9 72913038 SMC5 chr9 72913036 Exonic hg19 NA BE835280 Out-of-frame Intra-chr q21.12 q21.12 109985 ChimerSeq ChiTaRs ChiTaRs GNE-RPA3 GNE chr9 36237340 RPA3 chr7 7722774 Exonic hg19 NA AW753960 Out-of-frame Inter-chr p13.3 p21.3 109986 ChimerSeq ChiTaRs ChiTaRs TUFT1-TUFT1 TUFT1 chr1 151520503 TUFT1 chr1 151519785 Exonic hg19 NA CV324740 Out-of-frame Intra-chr q21.3 q21.3 109987 ChimerSeq ChiTaRs ChiTaRs BRD8-HLA-DRA BRD8 chr5 137492769 HLA-DRA chr6 3749765 Exonic hg19 NA AI335540 Out-of-frame Inter-chr q31.2 109988 ChimerSeq ChiTaRs ChiTaRs NR1I2-TMEM246 NR1I2 chr3 119511403 TMEM246 chr9 104237953 Exonic hg19 NA CA314620 Out-of-frame Inter-chr q13.33 Tumor suppressor gene Transcription factor q31.1 109989 ChimerSeq ChiTaRs ChiTaRs ESRRG-MT4 ESRRG chr1 217007502 MT4 chr16 56599030 Exonic hg19 NA BF759140 Out-of-frame Inter-chr q41 Transcription factor q13 109990 ChimerSeq ChiTaRs ChiTaRs NUDT3-SERINC5 NUDT3 chr6 34261314 SERINC5 chr5 79435548 Exonic hg19 NA AA314460 Out-of-frame Inter-chr p21.31 q14.1 109991 ChimerSeq ChiTaRs ChiTaRs U2SURP-U2SURP U2SURP chr3 142738844 U2SURP chr3 142731079 Exonic hg19 NA BF510130 Out-of-frame Intra-chr q23 q23 109992 ChimerSeq ChiTaRs ChiTaRs SMPDL3B-DNAJB12 SMPDL3B chr1 28285663 DNAJB12 chr10 74111618 Exonic hg19 NA AI571080 3'UTR-CDS Inter-chr p35.3 q22.1 109993 ChimerSeq ChiTaRs ChiTaRs RIOK1-IQCJ-SCHIP1 RIOK1 chr6 7414576 IQCJ-SCHIP1 chr3 159346155 Exonic hg19 NA BF359970 Out-of-frame Inter-chr p24.3 Atypical:RIO q25.32 109994 ChimerSeq ChiTaRs ChiTaRs IL1R1-IL1R1 IL1R1 chr2 102784722 IL1R1 chr2 102784451 Exonic hg19 NA AF054830 Out-of-frame Intra-chr q11.2 q11.2 109995 ChimerSeq ChiTaRs ChiTaRs DLG5-DLG5 DLG5 chr10 79558543 DLG5 chr10 79557917 Exonic hg19 NA AW277040 Out-of-frame Intra-chr q22.3 q22.3 109996 ChimerSeq ChiTaRs ChiTaRs RUFY2-LOC100506713 RUFY2 chr10 70153009 LOC100506713 chr17 6904451 Exonic hg19 NA AK074580 Out-of-frame Inter-chr q21.3 109997 ChimerSeq ChiTaRs ChiTaRs RALB-RALB RALB chr2 121051960 RALB chr2 121051242 Exonic hg19 NA BG986540 Out-of-frame Intra-chr q14.2 q14.2 109998 ChimerSeq ChiTaRs ChiTaRs IKBKE-STX8 IKBKE chr1 206652061 STX8 chr17 9443030 Exonic hg19 NA BF853570 Out-of-frame Inter-chr q32.1 Oncogene p13.1 109999 ChimerSeq ChiTaRs ChiTaRs JARID2-RPL23 JARID2 chr6 15498519 RPL23 chr17 37006414 Exonic hg19 NA BQ311440 Out-of-frame Inter-chr p22.3 q12 110000 ChimerSeq ChiTaRs ChiTaRs IMP4-NCKAP5 IMP4 chr2 131103798 NCKAP5 chr2 133959015 Exonic hg19 NA BF918530 Out-of-frame Intra-chr q21.1 q21.2 110001 ChimerSeq ChiTaRs ChiTaRs ARL6-KIAA1324L ARL6 chr3 97483912 KIAA1324L chr7 86512088 Exonic hg19 NA BP218270 Out-of-frame Inter-chr q11.2 q21.12 110002 ChimerSeq ChiTaRs ChiTaRs CTNNB1-AKAP11 CTNNB1 chr3 41280764 AKAP11 chr13 42869356 Exonic hg19 NA AW361450 Out-of-frame Inter-chr p22.1 Oncogene q14.11 110003 ChimerSeq ChiTaRs ChiTaRs PTPRF-PTPRF PTPRF chr1 44069674 PTPRF chr1 44069684 Exonic hg19 NA BQ300560 Out-of-frame Intra-chr p34.2 p34.2 110004 ChimerSeq ChiTaRs ChiTaRs SASS6-SASS6 SASS6 chr1 100549486 SASS6 chr1 100549271 Exonic hg19 NA AL044680 Out-of-frame Intra-chr p21.2 p21.2 110005 ChimerSeq ChiTaRs ChiTaRs CD74-CD74 CD74 chr5 149781493 CD74 chr5 149786726 Exonic hg19 NA AW512420 Out-of-frame Intra-chr q33.1 q33.1 110006 ChimerSeq ChiTaRs ChiTaRs ASAP1-P4HA3 ASAP1 chr8 131165052 P4HA3 chr11 73998187 Exonic hg19 NA BE702520 Out-of-frame Inter-chr q24.22 q13.4 110007 ChimerSeq ChiTaRs ChiTaRs VANGL1-VANGL1 VANGL1 chr1 116236328 VANGL1 chr1 116235902 Exonic hg19 NA CN478670 Out-of-frame Intra-chr p13.1 p13.1 110008 ChimerSeq ChiTaRs ChiTaRs TANC1-MAML2 TANC1 chr2 160057518 MAML2 chr11 96021383 Exonic hg19 NA AW889440 Out-of-frame Inter-chr q24.2 q21 Oncogene 110009 ChimerSeq ChiTaRs ChiTaRs TFCP2L1-SHMT1 TFCP2L1 chr2 122041739 SHMT1 chr17 18238384 Exonic hg19 NA BF356130 Out-of-frame Inter-chr q14.2 Transcription factor p11.2 110010 ChimerSeq ChiTaRs ChiTaRs EXT1-EXT1 EXT1 chr8 119086717 EXT1 chr8 119086384 Exonic hg19 NA BE077260 Out-of-frame Intra-chr q24.11 Oncogene Tumor suppressor gene q24.11 Oncogene Tumor suppressor gene 110011 ChimerSeq ChiTaRs ChiTaRs LOC100131564-PDE5A LOC100131564 chr1 93801890 PDE5A chr4 120436849 Exonic hg19 NA CV345100 Out-of-frame Inter-chr q26 110012 ChimerSeq ChiTaRs ChiTaRs SI-IFIH1 SI chr3 164723672 IFIH1 chr2 163128764 Exonic hg19 NA BF907120 Out-of-frame Inter-chr q26.1 q24.2 110013 ChimerSeq ChiTaRs ChiTaRs SV2A-DENND5A SV2A chr1 149875164 DENND5A chr11 9165719 Exonic hg19 NA AA776600 Out-of-frame Inter-chr q21.2 p15.4 110014 ChimerSeq ChiTaRs ChiTaRs CUL1-CUL1 CUL1 chr7 148497676 CUL1 chr7 148497664 Exonic hg19 NA BM128230 Out-of-frame Intra-chr q36.1 Tumor suppressor gene q36.1 Tumor suppressor gene 110015 ChimerSeq ChiTaRs ChiTaRs KIAA0907-KIAA0907 KIAA0907 chr1 155883452 KIAA0907 chr1 155883071 Exonic hg19 NA AL048100 Out-of-frame Intra-chr q22 q22 110016 ChimerSeq ChiTaRs ChiTaRs GPBP1-NKAIN4 GPBP1 chr5 56510020 NKAIN4 chr20 61874002 Exonic hg19 NA AW375850 Out-of-frame Inter-chr q11.2 Transcription factor q13.33 110017 ChimerSeq ChiTaRs ChiTaRs C1orf146-TAF8 C1orf146 chr1 92704594 TAF8 chr6 42048405 Exonic hg19 NA BF758200 Out-of-frame Inter-chr p22.1 p21.1 110018 ChimerSeq ChiTaRs ChiTaRs CTDSPL-CTDSPL CTDSPL chr3 38025956 CTDSPL chr3 38025035 Exonic hg19 NA AI740880 Out-of-frame Intra-chr p22.2 Tumor suppressor gene p22.2 Tumor suppressor gene 110019 ChimerSeq ChiTaRs ChiTaRs UBXN11-UBXN11 UBXN11 chr1 26611419 UBXN11 chr1 26609208 Exonic hg19 NA BQ325430 Out-of-frame Intra-chr p36.11 p36.11 110020 ChimerSeq ChiTaRs ChiTaRs PIR-FIGF-PIR-FIGF PIR-FIGF chrX 15402992 PIR-FIGF chrX 15403029 Exonic hg19 NA BU680110 Out-of-frame Intra-chr 110021 ChimerSeq ChiTaRs ChiTaRs CTSB-MYO7B CTSB chr8 11702408 MYO7B chr2 128321242 Exonic hg19 NA AI940520 Out-of-frame Inter-chr p23.1 q14.3 110022 ChimerSeq ChiTaRs ChiTaRs ZBTB37-CAMTA1 ZBTB37 chr1 173844307 CAMTA1 chr1 7553240 Exonic hg19 NA EL582680 Out-of-frame Intra-chr q25.1 Transcription factor p36.31 Tumor suppressor gene Transcription factor 110023 ChimerSeq ChiTaRs ChiTaRs CD109-CELF1 CD109 chr6 74537768 CELF1 chr11 47566067 Exonic hg19 NA BE090520 Out-of-frame Inter-chr q13 p11.2 110024 ChimerSeq ChiTaRs ChiTaRs FAM168B-FAM107B FAM168B chr2 131809662 FAM107B chr10 14612898 Exonic hg19 NA BF902150 Out-of-frame Inter-chr q21.1 p13 110025 ChimerSeq ChiTaRs ChiTaRs ARHGEF2-RAB6A ARHGEF2 chr1 155918181 RAB6A chr11 73472060 Exonic hg19 NA BM985170 Out-of-frame Inter-chr q22 q13.4 110026 ChimerSeq ChiTaRs ChiTaRs ACTR2-ADAMTS2 ACTR2 chr2 65496299 ADAMTS2 chr5 178747210 Exonic hg19 NA H14770 Out-of-frame Inter-chr p14 TKL:STKR 110027 ChimerSeq ChiTaRs ChiTaRs ITGA8-ITGA8 ITGA8 chr10 15756123 ITGA8 chr10 15755919 Exonic hg19 NA AW794080 Out-of-frame Intra-chr p13 p13 110028 ChimerSeq ChiTaRs ChiTaRs CMTM7-RSPO1 CMTM7 chr3 32493586 RSPO1 chr1 38077349 Exonic hg19 NA BQ300150 CDS-3'UTR Inter-chr p22.3 p34.3 110029 ChimerSeq ChiTaRs ChiTaRs NCBP1-TOMM7 NCBP1 chr9 100435853 TOMM7 chr7 22852817 Exonic hg19 NA AW877510 Out-of-frame Inter-chr q22.33 p15.3 110030 ChimerSeq ChiTaRs ChiTaRs MOCS2-DAB1 MOCS2 chr5 52394076 DAB1 chr1 57712226 Exonic hg19 NA CF529200 Out-of-frame Inter-chr q11.2 p32.1 110031 ChimerSeq ChiTaRs ChiTaRs REV1-REV1 REV1 chr2 100023085 REV1 chr2 100022393 Exonic hg19 NA BU675470 Out-of-frame Intra-chr q11.2 q11.2 110032 ChimerSeq ChiTaRs ChiTaRs MSH4-ZNF652 MSH4 chr1 76280770 ZNF652 chr17 47437597 Exonic hg19 NA BI024400 Out-of-frame Inter-chr p31.1 q21.33 Transcription factor 110033 ChimerSeq ChiTaRs ChiTaRs EFHD1-ADAM12 EFHD1 chr2 233547190 ADAM12 chr10 127753452 Exonic hg19 NA BF995070 Out-of-frame Inter-chr q37.1 q26.2 110034 ChimerSeq ChiTaRs ChiTaRs GABRE-PTPRM GABRE chrX 151139461 PTPRM chr18 7582907 Exonic hg19 NA BG011660 Out-of-frame Inter-chr q28 p11.23 110035 ChimerSeq ChiTaRs ChiTaRs MFN2-KIAA0825 MFN2 chr1 12072285 KIAA0825 chr5 93903406 Exonic hg19 NA BE171990 Out-of-frame Inter-chr p36.22 q15 110036 ChimerSeq ChiTaRs ChiTaRs WAC-VPS35 WAC chr10 28909462 VPS35 chr16 46694482 Exonic hg19 NA AA435640 Out-of-frame Inter-chr p12.1 q11.2 110037 ChimerSeq ChiTaRs ChiTaRs FAT4-STAMBPL1 FAT4 chr4 126413978 STAMBPL1 chr10 90708617 Exonic hg19 NA BP231880 Out-of-frame Inter-chr q28.1 Tumor suppressor gene q23.31 110038 ChimerSeq ChiTaRs ChiTaRs CACNA2D2-CACNA2D2 CACNA2D2 chr3 50404031 CACNA2D2 chr3 50404835 Exonic hg19 NA AI655740 Out-of-frame Intra-chr p21.31 p21.31 110039 ChimerSeq ChiTaRs ChiTaRs NCS1-NCS1 NCS1 chr9 132998320 NCS1 chr9 132997416 Exonic hg19 NA BG472770 Out-of-frame Intra-chr q34.11 q34.11 110040 ChimerSeq ChiTaRs ChiTaRs SETD2-SETD2 SETD2 chr3 47187910 SETD2 chr3 47195413 Exonic hg19 NA BE153980 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Oncogene Tumor suppressor gene 110041 ChimerSeq ChiTaRs ChiTaRs DMBT1-SND1 DMBT1 chr10 124403251 SND1 chr7 127654106 Exonic hg19 NA BF064110 Out-of-frame Inter-chr q26.13 Tumor suppressor gene q32.1 110042 ChimerSeq ChiTaRs ChiTaRs SCUBE2-SCUBE2 SCUBE2 chr11 9096096 SCUBE2 chr11 9088267 Exonic hg19 NA AA557990 Out-of-frame Intra-chr p15.4 Tumor suppressor gene p15.4 Tumor suppressor gene 110043 ChimerSeq ChiTaRs ChiTaRs YTHDC1-ING3 YTHDC1 chr4 19863 ING3 chr7 120590868 Exonic hg19 NA DW451070 Out-of-frame Inter-chr q31.31 Tumor suppressor gene 110044 ChimerSeq ChiTaRs ChiTaRs LAMC1-LAMC1 LAMC1 chr1 183048238 LAMC1 chr1 183003441 Exonic hg19 NA AW861100 Out-of-frame Intra-chr q25.3 q25.3 110045 ChimerSeq ChiTaRs ChiTaRs ASH1L-CUL9 ASH1L chr1 155327202 CUL9 chr6 43187904 Exonic hg19 NA BF334880 Out-of-frame Inter-chr q22 Transcription factor p21.1 110046 ChimerSeq ChiTaRs ChiTaRs BNC2-IGFBP5 BNC2 chr9 16454332 IGFBP5 chr2 217548094 Exonic hg19 NA AW296600 Out-of-frame Inter-chr p22.2 Transcription factor q35 Tumor suppressor gene 110047 ChimerSeq ChiTaRs ChiTaRs SLC30A6-EGFLAM SLC30A6 chr2 32449152 EGFLAM chr5 38407431 Exonic hg19 NA BU742230 Out-of-frame Inter-chr p22.3 p13.2 110048 ChimerSeq ChiTaRs ChiTaRs EIF3A-SLCO1B1 EIF3A chr10 120801937 SLCO1B1 chr12 21294366 Exonic hg19 NA AI207430 Out-of-frame Inter-chr q26.11 p12.1 110049 ChimerSeq ChiTaRs ChiTaRs PSMB1-GPBP1 PSMB1 chr6 170844437 GPBP1 chr5 56545371 Exonic hg19 NA BG272210 Out-of-frame Inter-chr q11.2 Transcription factor 110050 ChimerSeq ChiTaRs ChiTaRs IQCA1-PLEKHM3 IQCA1 chr2 237349381 PLEKHM3 chr2 208728111 Exonic hg19 NA BF944750 Out-of-frame Intra-chr q37.3 q33.3 110051 ChimerSeq ChiTaRs ChiTaRs C8orf33-C8orf33 C8orf33 chr8 146278175 C8orf33 chr8 146278686 Exonic hg19 NA AI340260 Out-of-frame Intra-chr q24.3 q24.3 110052 ChimerSeq ChiTaRs ChiTaRs ANK2-ZNF664 ANK2 chr4 114135570 ZNF664 chr12 124499392 Exonic hg19 NA BF218170 Out-of-frame Inter-chr q25 q24.31 Transcription factor 110053 ChimerSeq ChiTaRs ChiTaRs KIF13B-FLOT1 KIF13B chr8 28966992 FLOT1 chr6 2027915 Exonic hg19 NA BC014350 Out-of-frame Inter-chr p12 110054 ChimerSeq ChiTaRs ChiTaRs SH3KBP1-HOPX SH3KBP1 chrX 19674048 HOPX chr4 57514236 Exonic hg19 NA DR980990 Out-of-frame Inter-chr p22.12 q12 Tumor suppressor gene 110055 ChimerSeq ChiTaRs ChiTaRs OFCC1-OFCC1 OFCC1 chr6 9897240 OFCC1 chr6 9864277 Exonic hg19 NA AF548120 Out-of-frame Intra-chr p24.3 p24.3 110056 ChimerSeq ChiTaRs ChiTaRs GNPDA1-GNPDA1 GNPDA1 chr5 141380640 GNPDA1 chr5 141380253 Exonic hg19 NA N45950 Out-of-frame Intra-chr q31.3 q31.3 110057 ChimerSeq ChiTaRs ChiTaRs ESCO2-ESCO2 ESCO2 chr8 27667259 ESCO2 chr8 27667261 Exonic hg19 NA AA856840 Out-of-frame Intra-chr p21.1 p21.1 110058 ChimerSeq ChiTaRs ChiTaRs TAB2-PDE4D TAB2 chr6 149684831 PDE4D chr5 58950802 Exonic hg19 NA AW993560 Out-of-frame Inter-chr q25.1 q12.1 110059 ChimerSeq ChiTaRs ChiTaRs FAM157B-OGG1 FAM157B chr9 141138830 OGG1 chr3 9799035 Exonic hg19 NA BC062630 Out-of-frame Inter-chr q34.3 p25.3 110060 ChimerSeq ChiTaRs ChiTaRs PSPH-PSPH PSPH chr7 56146186 PSPH chr7 56142333 Exonic hg19 NA AW946340 Out-of-frame Intra-chr p11.2 p11.2 110061 ChimerSeq ChiTaRs ChiTaRs SEMA3G-SEMA3G SEMA3G chr3 52473350 SEMA3G chr3 52473373 Exonic hg19 NA BI052480 Out-of-frame Intra-chr p21.1 p21.1 110062 ChimerSeq ChiTaRs ChiTaRs NCOA1-NCOA1 NCOA1 chr2 24992913 NCOA1 chr2 24992887 Exonic hg19 NA AA319820 Out-of-frame Intra-chr p23.3 Oncogene Transcription factor p23.3 Oncogene Transcription factor 110063 ChimerSeq ChiTaRs ChiTaRs MAD1L1-MAD1L1 MAD1L1 chr7 2225378 MAD1L1 chr7 2225378 Exonic hg19 NA CB243720 Out-of-frame Intra-chr p22.3 Tumor suppressor gene p22.3 Tumor suppressor gene 110064 ChimerSeq ChiTaRs ChiTaRs ZCCHC17-KIAA0226L ZCCHC17 chr1 31836951 KIAA0226L chr13 46941480 Exonic hg19 NA BG981340 Out-of-frame Inter-chr p35.2 110065 ChimerSeq ChiTaRs ChiTaRs PTGDS-PTGDS PTGDS chr9 139876170 PTGDS chr9 139871961 Exonic hg19 NA BQ950270 Out-of-frame Intra-chr q34.3 q34.3 110066 ChimerSeq ChiTaRs ChiTaRs MRPL35-PEPD MRPL35 chr2 86437651 PEPD chr19 33877858 Exonic hg19 NA BQ426050 Out-of-frame Inter-chr p11.2 q13.11 110067 ChimerSeq ChiTaRs ChiTaRs TMUB1-PCBP2 TMUB1 chr7 150780065 PCBP2 chr12 53862031 Exonic hg19 NA BF804600 Out-of-frame Inter-chr q36.1 q13.13 110068 ChimerSeq ChiTaRs ChiTaRs SLC7A2-SLC7A2 SLC7A2 chr8 17359864 SLC7A2 chr8 17376671 Exonic hg19 NA DB377490 Out-of-frame Intra-chr p22 p22 110069 ChimerSeq ChiTaRs ChiTaRs SUPT7L-SUPT7L SUPT7L chr2 27876424 SUPT7L chr2 27876247 Exonic hg19 NA BF038130 Out-of-frame Intra-chr p23.3 p23.3 110070 ChimerSeq ChiTaRs ChiTaRs C7orf10-CRYAB C7orf10 chr7 40350985 CRYAB chr11 111779347 Exonic hg19 NA EB361070 Out-of-frame Inter-chr q23.1 110071 ChimerSeq ChiTaRs ChiTaRs MEPCE-MEPCE MEPCE chr7 100027728 MEPCE chr7 100027605 Exonic hg19 NA BQ898620 Out-of-frame Intra-chr q22.1 q22.1 110072 ChimerSeq ChiTaRs ChiTaRs DENND4B-BLMH DENND4B chr1 153914267 BLMH chr17 28616449 Exonic hg19 NA BQ345050 Out-of-frame Inter-chr q21.3 q11.2 110073 ChimerSeq ChiTaRs ChiTaRs HLA-DRB5-DTX3L HLA-DRB5 chr6 32485331 DTX3L chr3 122292891 Exonic hg19 NA DB343360 Out-of-frame Inter-chr p21.32 q21.1 110074 ChimerSeq ChiTaRs ChiTaRs NKTR-NKTR NKTR chr3 42678515 NKTR chr3 42678414 Exonic hg19 NA BU688730 Out-of-frame Intra-chr p22.1 p22.1 110075 ChimerSeq ChiTaRs ChiTaRs LPP-LPP LPP chr3 188601195 LPP chr3 188598147 Exonic hg19 NA BX119010 Out-of-frame Intra-chr q27.3 Oncogene q27.3 Oncogene 110076 ChimerSeq ChiTaRs ChiTaRs CACNA2D1-CACNA2D1 CACNA2D1 chr7 81695842 CACNA2D1 chr7 81964489 Exonic hg19 NA AI434840 Out-of-frame Intra-chr q21.11 q21.11 110077 ChimerSeq ChiTaRs ChiTaRs APPL1-NBEAL1 APPL1 chr3 57296695 NBEAL1 chr2 204016812 Exonic hg19 NA X52870 Out-of-frame Inter-chr p14.3 q33.2 110078 ChimerSeq ChiTaRs ChiTaRs ENTPD1-ENTPD1 ENTPD1 chr10 97626077 ENTPD1 chr10 97626056 Exonic hg19 NA AW581220 Out-of-frame Intra-chr q24.1 q24.1 110079 ChimerSeq ChiTaRs ChiTaRs MAP2-NAV1 MAP2 chr2 210394111 NAV1 chr1 201788982 Exonic hg19 NA T05560 Out-of-frame Inter-chr q34 q32.1 110080 ChimerSeq ChiTaRs ChiTaRs FN1-PIGL FN1 chr2 216269224 PIGL chr17 16167728 Exonic hg19 NA BE706180 Out-of-frame Inter-chr q35 Oncogene p11.2 110081 ChimerSeq ChiTaRs ChiTaRs RFTN1-RFTN1 RFTN1 chr3 16450914 RFTN1 chr3 16419269 Exonic hg19 NA AA210870 Out-of-frame Intra-chr p24.3 p24.3 110082 ChimerSeq ChiTaRs ChiTaRs SLC35A5-SLC35A5 SLC35A5 chr3 112301757 SLC35A5 chr3 112301750 Exonic hg19 NA BG284520 Out-of-frame Intra-chr q13.2 q13.2 110083 ChimerSeq ChiTaRs ChiTaRs CTTNBP2NL-RPL41 CTTNBP2NL chr1 112999518 RPL41 chr12 56511502 Exonic hg19 NA AK023340 Out-of-frame Inter-chr p13.2 q13.2 110084 ChimerSeq ChiTaRs ChiTaRs XPO5-HSPB1 XPO5 chr6 43506625 HSPB1 chr7 75932016 Exonic hg19 NA Z23090 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q11.23 110085 ChimerSeq ChiTaRs ChiTaRs NAALADL2-CORO1C NAALADL2 chr3 174181215 CORO1C chr12 109039262 Exonic hg19 NA BF816620 Out-of-frame Inter-chr q26.31 q24.11 110086 ChimerSeq ChiTaRs ChiTaRs CAMSAP2-CAMSAP2 CAMSAP2 chr1 200817217 CAMSAP2 chr1 200817182 Exonic hg19 NA BC056910 Out-of-frame Intra-chr q32.1 q32.1 110087 ChimerSeq ChiTaRs ChiTaRs WAPAL-ZCCHC4 WAPAL chr10 88200581 ZCCHC4 chr4 25371324 Exonic hg19 NA AA743860 Out-of-frame Inter-chr p15.2 110088 ChimerSeq ChiTaRs ChiTaRs C1orf116-C1orf116 C1orf116 chr1 207198403 C1orf116 chr1 207196280 Exonic hg19 NA BE792550 Out-of-frame Intra-chr q32.1 q32.1 110089 ChimerSeq ChiTaRs ChiTaRs NOTCH2-SLC44A1 NOTCH2 chr1 120612259 SLC44A1 chr9 108007210 Exonic hg19 NA CD050630 Out-of-frame Inter-chr p12 Oncogene Tumor suppressor gene q31.1 110090 ChimerSeq ChiTaRs ChiTaRs CEP70-CEP70 CEP70 chr3 138256078 CEP70 chr3 138219334 Exonic hg19 NA BM802320 Out-of-frame Intra-chr q22.3 q22.3 110091 ChimerSeq ChiTaRs ChiTaRs LOC550643-RAC1 LOC550643 chrX 56839946 RAC1 chr7 6442498 Exonic hg19 NA BI032870 Out-of-frame Inter-chr p22.1 Oncogene 110092 ChimerSeq ChiTaRs ChiTaRs PKN2-TXK PKN2 chr1 89281547 TXK chr4 48134518 Exonic hg19 NA H87820 Out-of-frame Inter-chr p22.2 AGC:PKN p12 TK:Tec 110093 ChimerSeq ChiTaRs ChiTaRs LRPAP1-LRPAP1 LRPAP1 chr4 3514450 LRPAP1 chr4 3514473 Exonic hg19 NA AI470190 Out-of-frame Intra-chr p16.3 p16.3 110094 ChimerSeq ChiTaRs ChiTaRs ZFR-ZFR ZFR chr5 32429784 ZFR chr5 32436742 Exonic hg19 NA BC063380 Out-of-frame Intra-chr p13.3 p13.3 110095 ChimerSeq ChiTaRs ChiTaRs DDX46-DDX46 DDX46 chr5 134164985 DDX46 chr5 134164803 Exonic hg19 NA AA653160 Out-of-frame Intra-chr q31.1 q31.1 110096 ChimerSeq ChiTaRs ChiTaRs ARID1A-ARID1A ARID1A chr1 27057978 ARID1A chr1 27094341 Exonic hg19 NA AW847910 Out-of-frame Intra-chr p36.11 Oncogene Tumor suppressor gene p36.11 Oncogene Tumor suppressor gene 110097 ChimerSeq ChiTaRs ChiTaRs ERCC6L2-ABCC3 ERCC6L2 chr9 98776842 ABCC3 chr17 48738088 Exonic hg19 NA AW450940 Out-of-frame Inter-chr q22.32 q21.33 110098 ChimerSeq ChiTaRs ChiTaRs R3HDM1-MBD5 R3HDM1 chr2 136319524 MBD5 chr2 149162751 Exonic hg19 NA BQ353800 Out-of-frame Intra-chr q21.3 q23.1 110099 ChimerSeq ChiTaRs ChiTaRs DIP2C-CD47 DIP2C chr10 713581 CD47 chr3 107764753 Exonic hg19 NA AW386080 Out-of-frame Inter-chr p15.3 q13.12 110100 ChimerSeq ChiTaRs ChiTaRs ENG-SFT2D1 ENG chr9 130616937 SFT2D1 chr6 166746733 Exonic hg19 NA DA620280 Out-of-frame Inter-chr q34.11 q27 110101 ChimerSeq ChiTaRs ChiTaRs HOOK3-HOOK3 HOOK3 chr8 42877232 HOOK3 chr8 42877796 Exonic hg19 NA AI825480 Out-of-frame Intra-chr p11.21 Oncogene p11.21 Oncogene 110102 ChimerSeq ChiTaRs ChiTaRs RREB1-PRKDC RREB1 chr6 7150362 PRKDC chr8 48699619 Exonic hg19 NA CV412890 Out-of-frame Inter-chr p24.3 Transcription factor q11.21 Oncogene 110103 ChimerSeq ChiTaRs ChiTaRs KIF1A-KIF1A KIF1A chr2 241653331 KIF1A chr2 241653673 Exonic hg19 NA AJ251620 Out-of-frame Intra-chr q37.3 q37.3 110104 ChimerSeq ChiTaRs ChiTaRs H2AFV-ABL2 H2AFV chr7 44875259 ABL2 chr1 179100535 Exonic hg19 NA DB293530 Out-of-frame Inter-chr p13 q25.2 TK:Abl Oncogene 110105 ChimerSeq ChiTaRs ChiTaRs PAPPA-PAPPA PAPPA chr9 118926976 PAPPA chr9 118926942 Exonic hg19 NA BF367810 Out-of-frame Intra-chr q33.1 q33.1 110106 ChimerSeq ChiTaRs ChiTaRs NDST4-TRPC3 NDST4 chr4 116034757 TRPC3 chr4 122800183 Exonic hg19 NA U47050 Out-of-frame Intra-chr q26 Tumor suppressor gene q27 110107 ChimerSeq ChiTaRs ChiTaRs ASPH-ASPH ASPH chr8 62621385 ASPH chr8 62621364 Exonic hg19 NA BF989500 Out-of-frame Intra-chr q12.3 q12.3 110108 ChimerSeq ChiTaRs ChiTaRs SNX7-SERPINA3 SNX7 chr1 99167416 SERPINA3 chr14 95078743 Exonic hg19 NA BC000620 Out-of-frame Inter-chr p21.3 q32.13 110109 ChimerSeq ChiTaRs ChiTaRs TXNDC5-BMP6 TXNDC5 chr6 7882394 BMP6 chr6 7881864 Exonic hg19 NA BF924220 Out-of-frame Intra-chr p24.3 p24.3 110110 ChimerSeq ChiTaRs ChiTaRs CMPK1-CMPK1 CMPK1 chr1 47844400 CMPK1 chr1 47844398 Exonic hg19 NA AA652040 Out-of-frame Intra-chr p33 Oncogene p33 Oncogene 110111 ChimerSeq ChiTaRs ChiTaRs OPTN-HMGN5 OPTN chr10 13161040 HMGN5 chrX 80371707 Exonic hg19 NA BF812950 Out-of-frame Inter-chr p13 q21.1 110112 ChimerSeq ChiTaRs ChiTaRs KCNIP4-KCNIP4 KCNIP4 chr4 21848599 KCNIP4 chr4 21848050 Exonic hg19 NA AY072610 Out-of-frame Intra-chr p15.2 p15.2 110113 ChimerSeq ChiTaRs ChiTaRs CAB39-CAB39 CAB39 chr2 231683960 CAB39 chr2 231683447 Exonic hg19 NA AF134480 Out-of-frame Intra-chr q37.1 q37.1 110114 ChimerSeq ChiTaRs ChiTaRs FRMPD4-CAST FRMPD4 chrX 12719528 CAST chr5 96101755 Exonic hg19 NA BI024000 Out-of-frame Inter-chr p22.2 q15 110115 ChimerSeq ChiTaRs ChiTaRs STK36-STK36 STK36 chr2 219564070 STK36 chr2 219540786 Exonic hg19 NA BG991610 Out-of-frame Intra-chr q35 Oncogene q35 Oncogene 110116 ChimerSeq ChiTaRs ChiTaRs MAML1-SERPINA3 MAML1 chr5 179193915 SERPINA3 chr14 95089018 Exonic hg19 NA EB385820 Out-of-frame Inter-chr q32.13 110117 ChimerSeq ChiTaRs ChiTaRs KALRN-ELF3 KALRN chr3 123758973 ELF3 chr1 201979752 Exonic hg19 NA AU120380 Out-of-frame Inter-chr q21.1 q32.1 Transcription factor 110118 ChimerSeq ChiTaRs ChiTaRs STK40-STK40 STK40 chr1 36807194 STK40 chr1 36851325 Exonic hg19 NA DA570690 Out-of-frame Intra-chr p34.3 p34.3 110119 ChimerSeq ChiTaRs ChiTaRs TACR1-TACR1 TACR1 chr2 75382660 TACR1 chr2 75382163 Exonic hg19 NA W28380 Out-of-frame Intra-chr p12 p12 110120 ChimerSeq ChiTaRs ChiTaRs LAMA2-LAMA2 LAMA2 chr6 129525636 LAMA2 chr6 129525441 Exonic hg19 NA BI491110 Out-of-frame Intra-chr q22.33 q22.33 110121 ChimerSeq ChiTaRs ChiTaRs LINC00337-CHCHD3 LINC00337 chr1 6299479 CHCHD3 chr7 132649873 Exonic hg19 NA AA705080 Out-of-frame Inter-chr p36.31 q33 Transcription factor 110122 ChimerSeq ChiTaRs ChiTaRs TRIM44-TRIM44 TRIM44 chr11 35829760 TRIM44 chr11 35829354 Exonic hg19 NA AA653900 Out-of-frame Intra-chr p13 p13 110123 ChimerSeq ChiTaRs ChiTaRs PARVA-TTC9C PARVA chr11 12525916 TTC9C chr11 62504653 Exonic hg19 NA BQ371090 Out-of-frame Intra-chr p15.3 q12.3 110124 ChimerSeq ChiTaRs ChiTaRs LRCH3-GNA13 LRCH3 chr3 197600117 GNA13 chr17 63047750 Exonic hg19 NA AA482030 Out-of-frame Inter-chr q29 q24.1 110125 ChimerSeq ChiTaRs ChiTaRs PGD-PGD PGD chr1 10480144 PGD chr1 10479702 Exonic hg19 NA AA654860 Out-of-frame Intra-chr p36.22 p36.22 110126 ChimerSeq ChiTaRs ChiTaRs IGFBP5-IGFBP5 IGFBP5 chr2 217538049 IGFBP5 chr2 217537809 Exonic hg19 NA CO245270 Out-of-frame Intra-chr q35 Tumor suppressor gene q35 Tumor suppressor gene 110127 ChimerSeq ChiTaRs ChiTaRs YY1AP1-YY1AP1 YY1AP1 chr1 155629580 YY1AP1 chr1 155630093 Exonic hg19 NA BE677820 Out-of-frame Intra-chr q22 q22 110128 ChimerSeq ChiTaRs ChiTaRs RARS2-RARS2 RARS2 chr6 88224200 RARS2 chr6 88224110 Exonic hg19 NA AA533240 Out-of-frame Intra-chr q15 q15 110129 ChimerSeq ChiTaRs ChiTaRs HPS1-TBX15 HPS1 chr10 100183406 TBX15 chr1 119524790 Exonic hg19 NA BQ435040 Out-of-frame Inter-chr q24.2 p12 Transcription factor 110130 ChimerSeq ChiTaRs ChiTaRs ARFGAP2-ARFGAP2 ARFGAP2 chr11 47193244 ARFGAP2 chr11 47188315 Exonic hg19 NA BP194100 Out-of-frame Intra-chr p11.2 p11.2 110131 ChimerSeq ChiTaRs ChiTaRs ENTPD1-IKZF1 ENTPD1 chr10 97553089 IKZF1 chr7 50470625 Exonic hg19 NA BF374130 Out-of-frame Inter-chr q24.1 p12.2 Oncogene Tumor suppressor gene Transcription factor 110132 ChimerSeq ChiTaRs ChiTaRs COMMD1-COMMD1 COMMD1 chr2 62352415 COMMD1 chr2 62351723 Exonic hg19 NA AI557080 Out-of-frame Intra-chr p15 p15 110133 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-TM2D1 INS-IGF2 chr11 2182411 TM2D1 chr1 62190690 Exonic hg19 NA BM509290 Out-of-frame Inter-chr p15.5 p31.3 Oncogene 110134 ChimerSeq ChiTaRs ChiTaRs HSF1-HSF1 HSF1 chr8 145532132 HSF1 chr8 145526411 Exonic hg19 NA AF289600 Out-of-frame Intra-chr q24.3 Transcription factor q24.3 Transcription factor 110135 ChimerSeq ChiTaRs ChiTaRs EIF4G2-EIF4G2 EIF4G2 chr11 10818965 EIF4G2 chr11 10818982 Exonic hg19 NA AW999110 Out-of-frame Intra-chr p15.4 p15.4 110136 ChimerSeq ChiTaRs ChiTaRs FLNA-RHOU FLNA chrX 153589933 RHOU chr1 228875908 Exonic hg19 NA BF848510 Out-of-frame Inter-chr q28 Tumor suppressor gene q42.13 110137 ChimerSeq ChiTaRs ChiTaRs COX20-COX20 COX20 chr1 245000586 COX20 chr1 245000909 Exonic hg19 NA AV723400 Out-of-frame Intra-chr q44 q44 110138 ChimerSeq ChiTaRs ChiTaRs ICK-ICK ICK chr6 52906133 ICK chr6 52878745 Exonic hg19 NA AA862830 Out-of-frame Intra-chr p12.1 CMGC:RCK Oncogene p12.1 CMGC:RCK Oncogene 110139 ChimerSeq ChiTaRs ChiTaRs TMEM214-DRG1 TMEM214 chr2 27263240 DRG1 chr22 31830006 Exonic hg19 NA BF813460 Out-of-frame Inter-chr p23.3 q12.2 Tumor suppressor gene 110140 ChimerSeq ChiTaRs ChiTaRs LOXL4-FAM222B LOXL4 chr10 100025588 FAM222B chr17 27148619 Exonic hg19 NA BF376500 Out-of-frame Inter-chr q24.2 q11.2 110141 ChimerSeq ChiTaRs ChiTaRs BMP1-BMP1 BMP1 chr8 22052390 BMP1 chr8 22034121 Exonic hg19 NA AA452720 Out-of-frame Intra-chr p21.3 p21.3 110142 ChimerSeq ChiTaRs ChiTaRs TMEM33-TMEM33 TMEM33 chr4 41961481 TMEM33 chr4 41961447 Exonic hg19 NA AW972840 Out-of-frame Intra-chr p13 p13 110143 ChimerSeq ChiTaRs ChiTaRs PWWP2A-GOPC PWWP2A chr5 159526539 GOPC chr6 117884193 Exonic hg19 NA BI014080 Out-of-frame Inter-chr q33.3 q22.1 110144 ChimerSeq ChiTaRs ChiTaRs CD59-NCBP1 CD59 chr11 33731750 NCBP1 chr9 100429073 Exonic hg19 NA DB373980 Out-of-frame Inter-chr p13 q22.33 110145 ChimerSeq ChiTaRs ChiTaRs FBXL17-AHNAK FBXL17 chr5 107505098 AHNAK chr11 62283374 Exonic hg19 NA AW970390 Out-of-frame Inter-chr q21.3 q12.3 Tumor suppressor gene 110146 ChimerSeq ChiTaRs ChiTaRs PEX11B-DNAJC11 PEX11B chr1 145516456 DNAJC11 chr1 6697260 Exonic hg19 NA BG685810 Out-of-frame Intra-chr q21.1 p36.31 Tumor suppressor gene 110147 ChimerSeq ChiTaRs ChiTaRs TKT-TKT TKT chr3 53262154 TKT chr3 53259670 Exonic hg19 NA BF529930 Out-of-frame Intra-chr p21.1 Tumor suppressor gene p21.1 Tumor suppressor gene 110148 ChimerSeq ChiTaRs ChiTaRs ANKRD17-ANKRD17 ANKRD17 chr4 73973191 ANKRD17 chr4 73959731 Exonic hg19 NA AF075680 Out-of-frame Intra-chr q13.3 q13.3 110149 ChimerSeq ChiTaRs ChiTaRs DAK-FTX DAK chr11 61114007 FTX chrX 73443839 Exonic hg19 NA BF821140 Out-of-frame Inter-chr q13.2 110150 ChimerSeq ChiTaRs ChiTaRs PREB-PREB PREB chr2 27356156 PREB chr2 27355503 Exonic hg19 NA AA467840 Out-of-frame Intra-chr p23.3 Transcription factor p23.3 Transcription factor 110151 ChimerSeq ChiTaRs ChiTaRs PARVA-ZDHHC3 PARVA chr11 12556592 ZDHHC3 chr3 44967041 Exonic hg19 NA H27240 Out-of-frame Inter-chr p15.3 110152 ChimerSeq ChiTaRs ChiTaRs DDX21-DDX21 DDX21 chr10 70744273 DDX21 chr10 70742504 Exonic hg19 NA CB160980 Out-of-frame Intra-chr q22.1 q22.1 110153 ChimerSeq ChiTaRs ChiTaRs ATP6V1H-PBK ATP6V1H chr8 54727284 PBK chr8 27679839 Exonic hg19 NA BI089750 Out-of-frame Intra-chr q11.23 p21.1 Other:TOPK 110154 ChimerSeq ChiTaRs ChiTaRs JMJD1C-SEC31B JMJD1C chr10 65023420 SEC31B chr10 102284632 Exonic hg19 NA AW996900 Out-of-frame Intra-chr q21.3 q24.31 110155 ChimerSeq ChiTaRs ChiTaRs MCM7-BAIAP2L1 MCM7 chr7 99695474 BAIAP2L1 chr7 98015041 Exonic hg19 NA BC011660 Out-of-frame Intra-chr q22.1 q22.1 110156 ChimerSeq ChiTaRs ChiTaRs ASL-DIAPH1 ASL chr7 65549245 DIAPH1 chr5 140954574 Exonic hg19 NA BF853820 Out-of-frame Inter-chr q11.21 q31.3 110157 ChimerSeq ChiTaRs ChiTaRs PPIG-SRSF5 PPIG chr2 170471217 SRSF5 chr14 70235360 Exonic hg19 NA BF095300 Out-of-frame Inter-chr q31.1 q24.1 110158 ChimerSeq ChiTaRs ChiTaRs AKR1A1-MED20 AKR1A1 chr1 46033519 MED20 chr6 41874553 Exonic hg19 NA AI110770 Out-of-frame Inter-chr p34.1 p21.1 110159 ChimerSeq ChiTaRs ChiTaRs ZBTB20-FBXO11 ZBTB20 chr3 114819167 FBXO11 chr2 48063092 Exonic hg19 NA DA219920 Out-of-frame Inter-chr q13.31 Transcription factor p16.3 110160 ChimerSeq ChiTaRs ChiTaRs EFCAB10-RRP12 EFCAB10 chr7 105208836 RRP12 chr10 99153983 Exonic hg19 NA BC007100 Out-of-frame Inter-chr q22.3 q24.1 110161 ChimerSeq ChiTaRs ChiTaRs EIF4A2-EIF4A2 EIF4A2 chr3 186505963 EIF4A2 chr3 186505654 Exonic hg19 NA AW840050 Out-of-frame Intra-chr q27.3 q27.3 110162 ChimerSeq ChiTaRs ChiTaRs SNX18-SNX18 SNX18 chr5 53841192 SNX18 chr5 53841031 Exonic hg19 NA AA721760 Out-of-frame Intra-chr q11.2 q11.2 110163 ChimerSeq ChiTaRs ChiTaRs PPP2R2C-CDK5RAP1 PPP2R2C chr4 6325208 CDK5RAP1 chr20 31948204 Exonic hg19 NA AA319710 Out-of-frame Inter-chr p16.1 Tumor suppressor gene q11.21 110164 ChimerSeq ChiTaRs ChiTaRs CCDC18-WSB2 CCDC18 chr1 93655346 WSB2 chr12 118479771 Exonic hg19 NA DB097970 Out-of-frame Inter-chr p22.1 q24.23 110165 ChimerSeq ChiTaRs ChiTaRs SERGEF-SERGEF SERGEF chr11 17833657 SERGEF chr11 17832568 Exonic hg19 NA BF885260 Out-of-frame Intra-chr p15.1 p15.1 110166 ChimerSeq ChiTaRs ChiTaRs KAZN-SLC4A3 KAZN chr1 15392160 SLC4A3 chr2 220506565 Exonic hg19 NA CB123220 Out-of-frame Inter-chr p36.21 q35 110167 ChimerSeq ChiTaRs ChiTaRs UBE2E2-UBE2E2 UBE2E2 chr3 23270532 UBE2E2 chr3 23267625 Exonic hg19 NA BX098560 Out-of-frame Intra-chr p24.3 p24.3 110168 ChimerSeq ChiTaRs ChiTaRs MAD2L1-FAM168B MAD2L1 chr4 120987922 FAM168B chr2 131809762 Exonic hg19 NA U65410 Out-of-frame Inter-chr q27 q21.1 110169 ChimerSeq ChiTaRs ChiTaRs ORC3-CTDP1 ORC3 chr6 88372827 CTDP1 chr18 77504994 Exonic hg19 NA BI035910 Out-of-frame Inter-chr q15 110170 ChimerSeq ChiTaRs ChiTaRs MBD5-EPC2 MBD5 chr2 149133250 EPC2 chr2 149511526 Exonic hg19 NA BE700850 Out-of-frame Intra-chr q23.1 q23.1 110171 ChimerSeq ChiTaRs ChiTaRs APBB3-RASSF4 APBB3 chr5 139938125 RASSF4 chr10 45477992 Exonic hg19 NA AI968150 Out-of-frame Inter-chr q31.3 q11.21 Tumor suppressor gene 110172 ChimerSeq ChiTaRs ChiTaRs SPRR2A-PCYOX1 SPRR2A chr1 153066051 PCYOX1 chr2 70508168 Exonic hg19 NA BE714440 Out-of-frame Inter-chr q21.3 p13.3 110173 ChimerSeq ChiTaRs ChiTaRs BMPR2-ZNF133 BMPR2 chr2 203432470 ZNF133 chr20 18287101 Exonic hg19 NA DB354940 Out-of-frame Inter-chr q33.1 TKL:STKR Tumor suppressor gene p11.23 Transcription factor 110174 ChimerSeq ChiTaRs ChiTaRs ARHGAP26-ARHGAP26 ARHGAP26 chr5 142195945 ARHGAP26 chr5 142196463 Exonic hg19 NA EL584890 Out-of-frame Intra-chr q31.3 q31.3 110175 ChimerSeq ChiTaRs ChiTaRs EBAG9-EBAG9 EBAG9 chr8 110576967 EBAG9 chr8 110563046 Exonic hg19 NA AI963170 Out-of-frame Intra-chr q23.2 q23.2 110176 ChimerSeq ChiTaRs ChiTaRs MAP7-GATAD2B MAP7 chr6 136681150 GATAD2B chr1 153791310 Exonic hg19 NA BF834670 Out-of-frame Inter-chr q23.3 Transcription factor 110177 ChimerSeq ChiTaRs ChiTaRs PKP4-PKP4 PKP4 chr2 159393438 PKP4 chr2 159393456 Exonic hg19 NA BE005140 Out-of-frame Intra-chr q24.1 q24.1 110178 ChimerSeq ChiTaRs ChiTaRs PRKDC-LAMB1 PRKDC chr8 48710913 LAMB1 chr7 107568290 Exonic hg19 NA BF088350 Out-of-frame Inter-chr q11.21 Oncogene q31.1 110179 ChimerSeq ChiTaRs ChiTaRs YAE1D1-YAE1D1 YAE1D1 chr7 39612035 YAE1D1 chr7 39612056 Exonic hg19 NA AW819900 Out-of-frame Intra-chr p14.1 p14.1 110180 ChimerSeq ChiTaRs ChiTaRs CTSL1-FHL1 CTSL1 chr9 90346308 FHL1 chrX 135291335 Exonic hg19 NA CA411570 Out-of-frame Inter-chr q26.3 Tumor suppressor gene 110181 ChimerSeq ChiTaRs ChiTaRs MAST4-COL12A1 MAST4 chr5 66340149 COL12A1 chr6 75862151 Exonic hg19 NA AW995260 Out-of-frame Inter-chr q12.3 AGC:MAST q14.1 110182 ChimerSeq ChiTaRs ChiTaRs ASB1-ASB1 ASB1 chr2 239359461 ASB1 chr2 239359497 Exonic hg19 NA AW844770 Out-of-frame Intra-chr q37.3 q37.3 110183 ChimerSeq ChiTaRs ChiTaRs TG-GPRC5A TG chr8 134101880 GPRC5A chr12 13064166 Exonic hg19 NA BF740490 Out-of-frame Inter-chr q24.22 p13.1 Tumor suppressor gene 110184 ChimerSeq ChiTaRs ChiTaRs CCNYL1-CCNYL1 CCNYL1 chr2 208614735 CCNYL1 chr2 208614396 Exonic hg19 NA AA829090 Out-of-frame Intra-chr q33.3 q33.3 110185 ChimerSeq ChiTaRs ChiTaRs LARP1B-LARP1B LARP1B chr4 129028344 LARP1B chr4 129097167 Exonic hg19 NA AW003560 Out-of-frame Intra-chr q28.2 q28.2 110186 ChimerSeq ChiTaRs ChiTaRs DOCK10-MEG3 DOCK10 chr2 225645571 MEG3 chr14 101319933 Exonic hg19 NA BF956860 Out-of-frame Inter-chr q36.2 q32.2 Tumor suppressor gene 110187 ChimerSeq ChiTaRs ChiTaRs PRG2-MACROD2 PRG2 chr11 57181206 MACROD2 chr20 15520706 Exonic hg19 NA BF812990 Out-of-frame Inter-chr q12.1 p12.1 110188 ChimerSeq ChiTaRs ChiTaRs WBP5-WBP5 WBP5 chrX 102612796 WBP5 chrX 102612794 Exonic hg19 NA BF839570 Out-of-frame Intra-chr 110189 ChimerSeq ChiTaRs ChiTaRs SURF4-FTL SURF4 chr9 136229604 FTL chr19 49468576 Exonic hg19 NA BF920940 Out-of-frame Inter-chr q13.33 110190 ChimerSeq ChiTaRs ChiTaRs GSN-RUNX1 GSN chr9 124089088 RUNX1 chr21 36233848 Exonic hg19 NA BE829610 Out-of-frame Inter-chr q33.2 Tumor suppressor gene q22.12 Oncogene Tumor suppressor gene Transcription factor 110191 ChimerSeq ChiTaRs ChiTaRs CCDC141-GMPS CCDC141 chr2 179916447 GMPS chr3 155611305 Exonic hg19 NA AU132130 Out-of-frame Inter-chr q31.2 q25.31 110192 ChimerSeq ChiTaRs ChiTaRs SIPA1L2-SIPA1L2 SIPA1L2 chr1 232607278 SIPA1L2 chr1 232607211 Exonic hg19 NA BF085760 Out-of-frame Intra-chr q42.2 q42.2 110193 ChimerSeq ChiTaRs ChiTaRs CREB1-CREB1 CREB1 chr2 208462311 CREB1 chr2 208462313 Exonic hg19 NA AA092330 Out-of-frame Intra-chr q33.3 Oncogene Transcription factor q33.3 Oncogene Transcription factor 110194 ChimerSeq ChiTaRs ChiTaRs KIF26B-TRNAU1AP KIF26B chr1 245349545 TRNAU1AP chr1 28893865 Exonic hg19 NA BE008620 Out-of-frame Intra-chr p35.3 110195 ChimerSeq ChiTaRs ChiTaRs IMMP2L-C3 IMMP2L chr7 110476857 C3 chr19 6717555 Exonic hg19 NA BG569290 Out-of-frame Inter-chr q31.1 p13.3 110196 ChimerSeq ChiTaRs ChiTaRs CUX1-WNT7A CUX1 chr7 101525113 WNT7A chr3 13899292 Exonic hg19 NA BF885360 Out-of-frame Inter-chr q22.1 Tumor suppressor gene Transcription factor p25.1 Tumor suppressor gene 110197 ChimerSeq ChiTaRs ChiTaRs KIF11-KIF11 KIF11 chr10 94414660 KIF11 chr10 94414629 Exonic hg19 NA BQ212450 Out-of-frame Intra-chr q23.33 q23.33 110198 ChimerSeq ChiTaRs ChiTaRs USP11-PRODH USP11 chrX 47107727 PRODH chr22 18913475 Exonic hg19 NA AI497670 3'UTR-CDS Inter-chr p11.3 q11.21 Tumor suppressor gene 110199 ChimerSeq ChiTaRs ChiTaRs DGKB-DGKB DGKB chr7 14775820 DGKB chr7 14652965 Exonic hg19 NA BF961320 Out-of-frame Intra-chr p21.2 p21.2 110200 ChimerSeq ChiTaRs ChiTaRs KIF1A-IQSEC1 KIF1A chr2 241704891 IQSEC1 chr3 12939708 Exonic hg19 NA BF959690 Out-of-frame Inter-chr q37.3 p25.2 110201 ChimerSeq ChiTaRs ChiTaRs SLC1A3-SLC1A3 SLC1A3 chr5 36687470 SLC1A3 chr5 36687055 Exonic hg19 NA W27410 Out-of-frame Intra-chr p13.2 p13.2 110202 ChimerSeq ChiTaRs ChiTaRs IFNGR1-SLC38A2 IFNGR1 chr6 137519182 SLC38A2 chr12 46752747 Exonic hg19 NA AI133230 Out-of-frame Inter-chr q23.3 q13.11 110203 ChimerSeq ChiTaRs ChiTaRs PLEC-LIMD1 PLEC chr8 144996475 LIMD1 chr3 45714226 Exonic hg19 NA BF841120 Out-of-frame Inter-chr q24.3 p21.31 Tumor suppressor gene 110204 ChimerSeq ChiTaRs ChiTaRs NT5C2-NT5C2 NT5C2 chr10 104879603 NT5C2 chr10 104878417 Exonic hg19 NA BE936930 Out-of-frame Intra-chr q24.33 q24.33 110205 ChimerSeq ChiTaRs ChiTaRs TIAM2-RAD1 TIAM2 chr6 155285433 RAD1 chr5 34908559 Exonic hg19 NA BU629140 Out-of-frame Inter-chr q25.2 p13.2 110206 ChimerSeq ChiTaRs ChiTaRs UTP23-HNRNPUL1 UTP23 chr8 117785558 HNRNPUL1 chr19 41808383 Exonic hg19 NA CN354390 Out-of-frame Inter-chr q24.11 q13.2 110207 ChimerSeq ChiTaRs ChiTaRs ZFAND2A-CDH11 ZFAND2A chr7 1192749 CDH11 chr16 65149789 Exonic hg19 NA BE677740 Out-of-frame Inter-chr p22.3 q21 Oncogene Tumor suppressor gene 110208 ChimerSeq ChiTaRs ChiTaRs GIGYF2-GAB3 GIGYF2 chr2 233721606 GAB3 chrX 153965890 Exonic hg19 NA BI013040 Out-of-frame Inter-chr q37.1 q28 110209 ChimerSeq ChiTaRs ChiTaRs PLK3-PLK3 PLK3 chr1 45271046 PLK3 chr1 45268728 Exonic hg19 NA BQ300580 Out-of-frame Intra-chr p34.1 Other:PLK p34.1 Other:PLK 110210 ChimerSeq ChiTaRs ChiTaRs TRIM15-RALY TRIM15 chr6 1470442 RALY chr20 32581851 Exonic hg19 NA AW390130 Out-of-frame Inter-chr Tumor suppressor gene q11.22 110211 ChimerSeq ChiTaRs ChiTaRs AAK1-UBE2E2 AAK1 chr2 69800818 UBE2E2 chr3 23509811 Exonic hg19 NA AI263440 Out-of-frame Inter-chr p13.3 Other:NAK p24.3 110212 ChimerSeq ChiTaRs ChiTaRs NDRG1-NDRG1 NDRG1 chr8 134250678 NDRG1 chr8 134296503 Exonic hg19 NA AU099490 Out-of-frame Intra-chr q24.22 Tumor suppressor gene q24.22 Tumor suppressor gene 110213 ChimerSeq ChiTaRs ChiTaRs MGAT5-RUNX1T1 MGAT5 chr2 135207659 RUNX1T1 chr8 92971503 Exonic hg19 NA AA249270 Out-of-frame Inter-chr q21.2 q21.3 Oncogene 110214 ChimerSeq ChiTaRs ChiTaRs EFHD1-LEF1 EFHD1 chr2 233503439 LEF1 chr4 109084733 Exonic hg19 NA BE144130 Out-of-frame Inter-chr q37.1 q25 Transcription factor 110215 ChimerSeq ChiTaRs ChiTaRs TXLNG2P-TXLNG2P TXLNG2P chrY 21755688 TXLNG2P chrY 21755318 Exonic hg19 NA BF895140 Out-of-frame Intra-chr 110216 ChimerSeq ChiTaRs ChiTaRs HDHD3-PTBP2 HDHD3 chr9 116135817 PTBP2 chr1 97200021 Exonic hg19 NA BM725050 Out-of-frame Inter-chr q32 p21.3 110217 ChimerSeq ChiTaRs ChiTaRs USH2A-ROBO2 USH2A chr1 216230391 ROBO2 chr3 76442536 Exonic hg19 NA N39450 Out-of-frame Inter-chr q41 p12.3 110218 ChimerSeq ChiTaRs ChiTaRs IRAK1BP1-IRAK1BP1 IRAK1BP1 chr6 79649878 IRAK1BP1 chr6 79650452 Exonic hg19 NA BG574510 Out-of-frame Intra-chr q14.1 q14.1 110219 ChimerSeq ChiTaRs ChiTaRs COL1A2-LGALS1 COL1A2 chr7 94058742 LGALS1 chr22 38071655 Exonic hg19 NA AI752600 CDS-5'UTR Inter-chr q21.3 q13.1 110220 ChimerSeq ChiTaRs ChiTaRs PLXNA2-TMEM50A PLXNA2 chr1 208417138 TMEM50A chr1 25664808 Exonic hg19 NA AK074960 Out-of-frame Intra-chr q32.2 p36.11 110221 ChimerSeq ChiTaRs ChiTaRs SLC39A7-SLC39A7 SLC39A7 chr6 4404144 SLC39A7 chr6 4403918 Exonic hg19 NA BF373590 Out-of-frame Intra-chr 110222 ChimerSeq ChiTaRs ChiTaRs SLC25A36-SLC25A36 SLC25A36 chr3 140670181 SLC25A36 chr3 140670145 Exonic hg19 NA BY798500 Out-of-frame Intra-chr q23 q23 110223 ChimerSeq ChiTaRs ChiTaRs SH3RF1-SH3RF1 SH3RF1 chr4 170126237 SH3RF1 chr4 170161991 Exonic hg19 NA BE063510 Out-of-frame Intra-chr q33 q33 110224 ChimerSeq ChiTaRs ChiTaRs CMAHP-CMAHP CMAHP chr6 25125415 CMAHP chr6 25125106 Exonic hg19 NA AW275670 Out-of-frame Intra-chr p22.3 p22.3 110225 ChimerSeq ChiTaRs ChiTaRs MAP4-MAP4 MAP4 chr3 47958227 MAP4 chr3 47957597 Exonic hg19 NA AI378470 Out-of-frame Intra-chr p21.31 p21.31 110226 ChimerSeq ChiTaRs ChiTaRs SLC4A7-SLC4A7 SLC4A7 chr3 27478997 SLC4A7 chr3 27418176 Exonic hg19 NA AB012130 Out-of-frame Intra-chr p24.1 p24.1 110227 ChimerSeq ChiTaRs ChiTaRs FZD1-FZD1 FZD1 chr7 90896865 FZD1 chr7 90895977 Exonic hg19 NA W01830 Out-of-frame Intra-chr q21.13 q21.13 110228 ChimerSeq ChiTaRs ChiTaRs FLJ39653-FLJ39653 FLJ39653 chr4 16231273 FLJ39653 chr4 16231250 Exonic hg19 NA CV343980 Out-of-frame Intra-chr 110229 ChimerSeq ChiTaRs ChiTaRs FRMPD3-RBM8A FRMPD3 chrX 106848481 RBM8A chr1 145507685 Exonic hg19 NA AI962310 Out-of-frame Inter-chr q22.3 q21.1 110230 ChimerSeq ChiTaRs ChiTaRs GYG2-GYG2 GYG2 chrX 2772049 GYG2 chrX 2772129 Exonic hg19 NA BF309900 Out-of-frame Intra-chr p22.33 p22.33 110231 ChimerSeq ChiTaRs ChiTaRs CORO2A-IPPK CORO2A chr9 100934971 IPPK chr9 95398014 Exonic hg19 NA CF595670 Out-of-frame Intra-chr q22.33 q22.31 110232 ChimerSeq ChiTaRs ChiTaRs KIF13B-CHD2 KIF13B chr8 29087608 CHD2 chr15 93467739 Exonic hg19 NA AI904060 Out-of-frame Inter-chr p12 q26.1 110233 ChimerSeq ChiTaRs ChiTaRs CAP2-CCDC28B CAP2 chr6 17557180 CCDC28B chr1 32670811 Exonic hg19 NA F32490 Out-of-frame Inter-chr p22.3 p35.2 110234 ChimerSeq ChiTaRs ChiTaRs FIGF-FIGF FIGF chrX 15363941 FIGF chrX 15376217 Exonic hg19 NA CB218800 Out-of-frame Intra-chr 110235 ChimerSeq ChiTaRs ChiTaRs MAGI3-MAGI3 MAGI3 chr1 114088935 MAGI3 chr1 114085640 Exonic hg19 NA AK021970 Out-of-frame Intra-chr p13.2 p13.2 110236 ChimerSeq ChiTaRs ChiTaRs SSR3-MACF1 SSR3 chr3 156258040 MACF1 chr1 39881325 Exonic hg19 NA AW168600 Out-of-frame Inter-chr q25.31 p34.3 110237 ChimerSeq ChiTaRs ChiTaRs MACF1-SERPINA5 MACF1 chr1 39844268 SERPINA5 chr14 95058645 Exonic hg19 NA AA689550 Out-of-frame Inter-chr p34.3 q32.13 110238 ChimerSeq ChiTaRs ChiTaRs DSP-SAMD4A DSP chr6 7563001 SAMD4A chr14 55171429 Exonic hg19 NA BE939920 Out-of-frame Inter-chr p24.3 Tumor suppressor gene q22.2 110239 ChimerSeq ChiTaRs ChiTaRs PLOD3-PLOD3 PLOD3 chr7 100856225 PLOD3 chr7 100853852 Exonic hg19 NA CF125710 Out-of-frame Intra-chr q22.1 q22.1 110240 ChimerSeq ChiTaRs ChiTaRs LOC283070-LOC283070 LOC283070 chr10 12876028 LOC283070 chr10 12876003 Exonic hg19 NA BU153500 Out-of-frame Intra-chr 110241 ChimerSeq ChiTaRs ChiTaRs PLP2-TIMM17B PLP2 chrX 49031351 TIMM17B chrX 48750756 Exonic hg19 NA BE716540 Out-of-frame Intra-chr p11.23 p11.23 110242 ChimerSeq ChiTaRs ChiTaRs MECP2-NKIRAS2 MECP2 chrX 153287548 NKIRAS2 chr17 40177228 Exonic hg19 NA BE350810 Out-of-frame Inter-chr q28 Transcription factor q21.2 110243 ChimerSeq ChiTaRs ChiTaRs SEC24D-TPM3 SEC24D chr4 119644235 TPM3 chr1 154158571 Exonic hg19 NA BE695910 Out-of-frame Inter-chr q26 q21.3 110244 ChimerSeq ChiTaRs ChiTaRs LETM1-ERC1 LETM1 chr4 1817444 ERC1 chr12 1589555 Exonic hg19 NA BG957200 Out-of-frame Inter-chr p16.3 110245 ChimerSeq ChiTaRs ChiTaRs DCTN4-DCTN4 DCTN4 chr5 150110822 DCTN4 chr5 150110214 Exonic hg19 NA BF846890 Out-of-frame Intra-chr q33.1 q33.1 110246 ChimerSeq ChiTaRs ChiTaRs SDF4-WBSCR22 SDF4 chr1 1167358 WBSCR22 chr7 73097940 Exonic hg19 NA BF312340 Out-of-frame Inter-chr p36.33 110247 ChimerSeq ChiTaRs ChiTaRs DDR1-TERF2IP DDR1 chr6 2160922 TERF2IP chr16 75690846 Exonic hg19 NA BU676550 Out-of-frame Inter-chr TK:DDR q23.1 110248 ChimerSeq ChiTaRs ChiTaRs PPAP2B-PPAP2B PPAP2B chr1 56977692 PPAP2B chr1 56961100 Exonic hg19 NA BF508320 Out-of-frame Intra-chr 110249 ChimerSeq ChiTaRs ChiTaRs DENND2D-DENND2D DENND2D chr1 111742415 DENND2D chr1 111738538 Exonic hg19 NA BG387960 Out-of-frame Intra-chr p13.2 Tumor suppressor gene p13.2 Tumor suppressor gene 110250 ChimerSeq ChiTaRs ChiTaRs RGL1-RTN4 RGL1 chr1 183618186 RTN4 chr2 55205103 Exonic hg19 NA T07660 Out-of-frame Inter-chr q25.3 p16.1 Tumor suppressor gene 110251 ChimerSeq ChiTaRs ChiTaRs TAX1BP1-MRTO4 TAX1BP1 chr7 27809628 MRTO4 chr1 19579749 Exonic hg19 NA BG929350 Out-of-frame Inter-chr p15.2 p36.13 110252 ChimerSeq ChiTaRs ChiTaRs SNRPE-SETBP1 SNRPE chr1 203831187 SETBP1 chr18 42532622 Exonic hg19 NA DA778780 Out-of-frame Inter-chr q32.1 q12.3 Oncogene Transcription factor 110253 ChimerSeq ChiTaRs ChiTaRs KLHL21-KLHL21 KLHL21 chr1 6654652 KLHL21 chr1 6652089 Exonic hg19 NA AW875570 Out-of-frame Intra-chr p36.31 p36.31 110254 ChimerSeq ChiTaRs ChiTaRs NISCH-NXN NISCH chr3 52527084 NXN chr17 824835 Exonic hg19 NA CB049610 Out-of-frame Inter-chr p21.1 p13.3 110255 ChimerSeq ChiTaRs ChiTaRs SRGN-SRGN SRGN chr10 70864133 SRGN chr10 70847859 Exonic hg19 NA BP217490 Out-of-frame Intra-chr q22.1 q22.1 110256 ChimerSeq ChiTaRs ChiTaRs EHF-PDK4 EHF chr11 34684503 PDK4 chr7 95214085 Exonic hg19 NA AW992900 Out-of-frame Inter-chr p13 Tumor suppressor gene Transcription factor q21.3 110257 ChimerSeq ChiTaRs ChiTaRs CHRM3-CHRM3 CHRM3 chr1 239648962 CHRM3 chr1 239651538 Exonic hg19 NA CV402170 Out-of-frame Intra-chr q43 q43 110258 ChimerSeq ChiTaRs ChiTaRs ANO10-ANO10 ANO10 chr3 43449659 ANO10 chr3 43442300 Exonic hg19 NA Z20680 Out-of-frame Intra-chr p21.33 p21.33 110259 ChimerSeq ChiTaRs ChiTaRs TRIQK-PHLDB2 TRIQK chr8 93941170 PHLDB2 chr3 111668139 Exonic hg19 NA CV416510 Out-of-frame Inter-chr q22.1 q13.2 110260 ChimerSeq ChiTaRs ChiTaRs MYOF-MYOF MYOF chr10 95070394 MYOF chr10 95072776 Exonic hg19 NA AA528800 Out-of-frame Intra-chr q23.33 q23.33 110261 ChimerSeq ChiTaRs ChiTaRs NCL-HSPA8 NCL chr2 232321412 HSPA8 chr11 122929415 Exonic hg19 NA CV345070 Out-of-frame Inter-chr q37.1 q24.1 110262 ChimerSeq ChiTaRs ChiTaRs GRK5-GRK5 GRK5 chr10 121008058 GRK5 chr10 121006210 Exonic hg19 NA CV364610 Out-of-frame Intra-chr q26.11 q26.11 110263 ChimerSeq ChiTaRs ChiTaRs F11R-F11R F11R chr1 160967433 F11R chr1 160966974 Exonic hg19 NA C06030 Out-of-frame Intra-chr q23.3 q23.3 110264 ChimerSeq ChiTaRs ChiTaRs PDCD4-CHD1L PDCD4 chr10 112635830 CHD1L chr1 146747014 Exonic hg19 NA DA689020 Out-of-frame Inter-chr q25.2 Tumor suppressor gene q21.1 110265 ChimerSeq ChiTaRs ChiTaRs RALYL-RALYL RALYL chr8 85833534 RALYL chr8 85833501 Exonic hg19 NA BF108460 Out-of-frame Intra-chr q21.2 q21.2 110266 ChimerSeq ChiTaRs ChiTaRs CRIPT-ZFP36L1 CRIPT chr2 46852137 ZFP36L1 chr14 69255311 Exonic hg19 NA AF123320 Out-of-frame Inter-chr p21 q24.1 110267 ChimerSeq ChiTaRs ChiTaRs RNF130-RNF130 RNF130 chr5 179407202 RNF130 chr5 179407171 Exonic hg19 NA DA403680 Out-of-frame Intra-chr q35.3 q35.3 110268 ChimerSeq ChiTaRs ChiTaRs EPB41L2-LARP1 EPB41L2 chr6 131384382 LARP1 chr5 154196355 Exonic hg19 NA BM841980 Out-of-frame Inter-chr q23.2 q33.2 110269 ChimerSeq ChiTaRs ChiTaRs SETX-FAM172A SETX chr9 135218355 FAM172A chr5 93267976 Exonic hg19 NA BF842920 Out-of-frame Inter-chr q34.13 q15 Tumor suppressor gene 110270 ChimerSeq ChiTaRs ChiTaRs WHSC1L1-COX4I1 WHSC1L1 chr8 38189107 COX4I1 chr16 85838624 Exonic hg19 NA BG977610 Out-of-frame Inter-chr p11.23 Tumor suppressor gene q24.1 110271 ChimerSeq ChiTaRs ChiTaRs ACAP2-QKI ACAP2 chr3 195001563 QKI chr6 163931554 Exonic hg19 NA AK021880 Out-of-frame Inter-chr q29 q26 110272 ChimerSeq ChiTaRs ChiTaRs AGK-AGK AGK chr7 141296143 AGK chr7 141295895 Exonic hg19 NA CV333650 Out-of-frame Intra-chr 110273 ChimerSeq ChiTaRs ChiTaRs SNX4-OSBPL11 SNX4 chr3 125239046 OSBPL11 chr3 125271442 Exonic hg19 NA CB990530 Out-of-frame Intra-chr q21.2 q21.2 110274 ChimerSeq ChiTaRs ChiTaRs SEMA3C-SEMA3C SEMA3C chr7 80372825 SEMA3C chr7 80372804 Exonic hg19 NA AW367430 Out-of-frame Intra-chr q21.11 q21.11 110275 ChimerSeq ChiTaRs ChiTaRs LOC344595-SPECC1L LOC344595 chr3 107018348 SPECC1L chr22 24829092 Exonic hg19 NA S46950 Out-of-frame Inter-chr q11.23 110276 ChimerSeq ChiTaRs ChiTaRs CASP2-CASP2 CASP2 chr7 143004789 CASP2 chr7 143004598 Exonic hg19 NA CA312800 3'UTR-3'UTR Intra-chr q34 Tumor suppressor gene q34 Tumor suppressor gene 110277 ChimerSeq ChiTaRs ChiTaRs CTSL1-CTSL1 CTSL1 chr9 90346308 CTSL1 chr9 90344596 Exonic hg19 NA BQ774810 Out-of-frame Intra-chr 110278 ChimerSeq ChiTaRs ChiTaRs LRPPRC-ADAM12 LRPPRC chr2 44126431 ADAM12 chr10 127711902 Exonic hg19 NA BF994360 Out-of-frame Inter-chr p21 q26.2 110279 ChimerSeq ChiTaRs ChiTaRs MAPK9-ITPR1 MAPK9 chr5 179660926 ITPR1 chr3 4744508 Exonic hg19 NA AI363310 Out-of-frame Inter-chr q35.3 Tumor suppressor gene p26.1 110280 ChimerSeq ChiTaRs ChiTaRs NGFRAP1-TAF13 NGFRAP1 chrX 102632997 TAF13 chr1 109612253 Exonic hg19 NA BQ939830 Out-of-frame Inter-chr p13.3 110281 ChimerSeq ChiTaRs ChiTaRs AQPEP-IDO2 AQPEP chr5 115314720 IDO2 chr8 39810708 Exonic hg19 NA BG007180 Out-of-frame Inter-chr p11.21 110282 ChimerSeq ChiTaRs ChiTaRs SMURF1-TTC18 SMURF1 chr7 98646089 TTC18 chr10 75109802 Exonic hg19 NA AA470140 Out-of-frame Inter-chr 110283 ChimerSeq ChiTaRs ChiTaRs ATXN1-ATXN1 ATXN1 chr6 16301613 ATXN1 chr6 16302349 Exonic hg19 NA DA486880 Out-of-frame Intra-chr p22.3 p22.3 110284 ChimerSeq ChiTaRs ChiTaRs ANAPC16-FLNB ANAPC16 chr10 73772635 FLNB chr3 58117332 Exonic hg19 NA BG952180 Out-of-frame Inter-chr q22.1 p14.3 110285 ChimerSeq ChiTaRs ChiTaRs HLA-DPA1-QKI HLA-DPA1 chr6 4518062 QKI chr6 163968766 Exonic hg19 NA BF933470 Out-of-frame Intra-chr q26 110286 ChimerSeq ChiTaRs ChiTaRs GNLY-PCBP1 GNLY chr2 85924210 PCBP1 chr2 70316033 Exonic hg19 NA BF878790 Out-of-frame Intra-chr p11.2 p13.3 110287 ChimerSeq ChiTaRs ChiTaRs ZNF800-TANK ZNF800 chr7 127012250 TANK chr2 162061402 Exonic hg19 NA AW812280 Out-of-frame Inter-chr q31.33 Transcription factor q24.2 Tumor suppressor gene 110288 ChimerSeq ChiTaRs ChiTaRs ATP6V1C1-ATP6V1C1 ATP6V1C1 chr8 104081793 ATP6V1C1 chr8 104081265 Exonic hg19 NA BM979210 Out-of-frame Intra-chr q22.3 q22.3 110289 ChimerSeq ChiTaRs ChiTaRs MAD1L1-MAD1L1 MAD1L1 chr7 1913527 MAD1L1 chr7 1913975 Exonic hg19 NA AA706490 Out-of-frame Intra-chr p22.3 Tumor suppressor gene p22.3 Tumor suppressor gene 110290 ChimerSeq ChiTaRs ChiTaRs C5orf30-PAM C5orf30 chr5 102594599 PAM chr5 102201526 Exonic hg19 NA DA406720 5'UTR-5'UTR Intra-chr q21.1 q21.1 110291 ChimerSeq ChiTaRs ChiTaRs SLC3A2-SLC3A2 SLC3A2 chr11 62655929 SLC3A2 chr11 62652670 Exonic hg19 NA BG472080 Out-of-frame Intra-chr q12.3 q12.3 110292 ChimerSeq ChiTaRs ChiTaRs LAMB3-TBL1X LAMB3 chr1 209789948 TBL1X chrX 9485248 Exonic hg19 NA BE140570 Out-of-frame Inter-chr q32.2 p22.31 110293 ChimerSeq ChiTaRs ChiTaRs ZRANB2-AS1-ZRANB2-AS1 ZRANB2-AS1 chr1 71529452 ZRANB2-AS1 chr1 71529020 Exonic hg19 NA BE894400 Out-of-frame Intra-chr p31.1 p31.1 Tumor suppressor gene 110294 ChimerSeq ChiTaRs ChiTaRs SRPRB-SRPRB SRPRB chr3 133539511 SRPRB chr3 133539145 Exonic hg19 NA CA313980 Out-of-frame Intra-chr q22.1 q22.1 110295 ChimerSeq ChiTaRs ChiTaRs ALCAM-ALCAM ALCAM chr3 105294979 ALCAM chr3 105294617 Exonic hg19 NA BM971400 Out-of-frame Intra-chr q13.11 q13.11 110296 ChimerSeq ChiTaRs ChiTaRs SPTAN1-NTRK3 SPTAN1 chr9 131345129 NTRK3 chr15 88450711 Exonic hg19 NA AW498510 Out-of-frame Inter-chr q34.11 q25.3 Oncogene Tumor suppressor gene 110297 ChimerSeq ChiTaRs ChiTaRs CD74-CD74 CD74 chr5 149781480 CD74 chr5 149781208 Exonic hg19 NA AW974280 Out-of-frame Intra-chr q33.1 q33.1 110298 ChimerSeq ChiTaRs ChiTaRs ARPC4-TTLL3-ARPC4-TTLL3 ARPC4-TTLL3 chr3 9876974 ARPC4-TTLL3 chr3 9876965 Exonic hg19 NA AA557690 Out-of-frame Intra-chr p25.3 p25.3 110299 ChimerSeq ChiTaRs ChiTaRs GTF2E2-GTF2E2 GTF2E2 chr8 30436364 GTF2E2 chr8 30436105 Exonic hg19 NA BE005000 Out-of-frame Intra-chr p12 p12 110300 ChimerSeq ChiTaRs ChiTaRs BICC1-BICC1 BICC1 chr10 60472795 BICC1 chr10 60472756 Exonic hg19 NA BF752060 Out-of-frame Intra-chr q21.1 q21.1 110301 ChimerSeq ChiTaRs ChiTaRs BAG3-BAG3 BAG3 chr10 121436167 BAG3 chr10 121431786 Exonic hg19 NA Z24890 Out-of-frame Intra-chr q26.11 q26.11 110302 ChimerSeq ChiTaRs ChiTaRs NDUFS3-PDE4B NDUFS3 chr11 47605919 PDE4B chr1 66838835 Exonic hg19 NA BQ352220 Out-of-frame Inter-chr p11.2 p31.3 110303 ChimerSeq ChiTaRs ChiTaRs FGB-FGB FGB chr4 155492174 FGB chr4 155492186 Exonic hg19 NA AW970840 Out-of-frame Intra-chr q31.3 q31.3 110304 ChimerSeq ChiTaRs ChiTaRs LAPTM4A-DHDDS LAPTM4A chr2 20247869 DHDDS chr1 26765919 Exonic hg19 NA CV321690 Out-of-frame Inter-chr p24.1 p36.11 110305 ChimerSeq ChiTaRs ChiTaRs TSC22D3-KIAA1324 TSC22D3 chrX 106960264 KIAA1324 chr1 109745677 Exonic hg19 NA BP394700 Out-of-frame Inter-chr q22.3 p13.3 110306 ChimerSeq ChiTaRs ChiTaRs SLC36A2-RPL24 SLC36A2 chr5 150727123 RPL24 chr3 101399942 Exonic hg19 NA AK122630 Out-of-frame Inter-chr q33.1 q12.3 110307 ChimerSeq ChiTaRs ChiTaRs EBF1-EBF1 EBF1 chr5 158485071 EBF1 chr5 158484478 Exonic hg19 NA AA768060 Out-of-frame Intra-chr q33.3 Transcription factor q33.3 Transcription factor 110308 ChimerSeq ChiTaRs ChiTaRs SYN1-ALDOC SYN1 chrX 47446190 ALDOC chr17 26900382 Exonic hg19 NA AI193580 Out-of-frame Inter-chr p11.23 q11.2 110309 ChimerSeq ChiTaRs ChiTaRs RUFY3-ZNF462 RUFY3 chr4 71587988 ZNF462 chr9 109691348 Exonic hg19 NA M78270 Out-of-frame Inter-chr q13.3 q31.2 Transcription factor 110310 ChimerSeq ChiTaRs ChiTaRs RPS6-NPAS2 RPS6 chr9 19376568 NPAS2 chr2 101541622 Exonic hg19 NA AW973590 Out-of-frame Inter-chr p22.1 q11.2 Tumor suppressor gene Transcription factor 110311 ChimerSeq ChiTaRs ChiTaRs AHCYL2-PTGES3 AHCYL2 chr7 128909673 PTGES3 chr12 57066563 Exonic hg19 NA AW793520 Out-of-frame Inter-chr q32.1 q13.3 110312 ChimerSeq ChiTaRs ChiTaRs GPD1L-UBE2G1 GPD1L chr3 32210129 UBE2G1 chr17 4268209 Exonic hg19 NA BF849090 Out-of-frame Inter-chr p22.3 p13.2 110313 ChimerSeq ChiTaRs ChiTaRs RLF-MYCL1 RLF chr1 40627309 MYCL1 chr1 40367065 Exonic hg19 NA X58480 Out-of-frame Intra-chr p34.2 Transcription factor 110314 ChimerSeq ChiTaRs ChiTaRs SHROOM2-TOP1 SHROOM2 chrX 9765327 TOP1 chr20 39750756 Exonic hg19 NA BG008680 Out-of-frame Inter-chr p22.2 q12 Oncogene 110315 ChimerSeq ChiTaRs ChiTaRs HSPE1-TMPRSS7 HSPE1 chr2 198368107 TMPRSS7 chr3 111798372 Exonic hg19 NA DN994272 Out-of-frame Inter-chr q33.1 q13.2 110316 ChimerSeq ChiTaRs ChiTaRs RPL8-TM9SF4 RPL8 chr8 146016771 TM9SF4 chr20 30729302 Exonic hg19 NA CV366110 Out-of-frame Inter-chr q24.3 q11.21 110317 ChimerSeq ChiTaRs ChiTaRs RPS14-RPS19 RPS14 chr5 149829300 RPS19 chr19 42373271 Exonic hg19 NA BU602070 Out-of-frame Inter-chr q33.1 q13.2 110318 ChimerSeq ChiTaRs ChiTaRs DOCK2-KCTD7 DOCK2 chr5 169485916 KCTD7 chr7 66105861 Exonic hg19 NA BQ371250 Out-of-frame Inter-chr q35.1 q11.21 110319 ChimerSeq ChiTaRs ChiTaRs ATP13A3-ATP13A3 ATP13A3 chr3 194151753 ATP13A3 chr3 194134507 Exonic hg19 NA BQ308080 Out-of-frame Intra-chr q29 q29 110320 ChimerSeq ChiTaRs ChiTaRs WHSC1-WHSC1 WHSC1 chr4 1920221 WHSC1 chr4 1902816 Exonic hg19 NA BE079790 Out-of-frame Intra-chr Oncogene Oncogene 110321 ChimerSeq ChiTaRs ChiTaRs FAM107B-PHF11 FAM107B chr10 14606894 PHF11 chr13 50096069 Exonic hg19 NA BE937160 Out-of-frame Inter-chr p13 q14.2 110322 ChimerSeq ChiTaRs ChiTaRs DIRAS2-COMMD1 DIRAS2 chr9 93375818 COMMD1 chr2 62302324 Exonic hg19 NA DB297590 Out-of-frame Inter-chr q22.2 p15 110323 ChimerSeq ChiTaRs ChiTaRs C1orf151-NBL1-C1orf151-NBL1 C1orf151-NBL1 chr1 19984583 C1orf151-NBL1 chr1 19984567 Exonic hg19 NA CV569320 Out-of-frame Intra-chr 110324 ChimerSeq ChiTaRs ChiTaRs SNX4-EPC2 SNX4 chr3 125165847 EPC2 chr2 149528937 Exonic hg19 NA BE716950 Out-of-frame Inter-chr q21.2 q23.1 110325 ChimerSeq ChiTaRs ChiTaRs LPCAT1-SYT1 LPCAT1 chr5 1465876 SYT1 chr12 79845330 Exonic hg19 NA AV731790 Out-of-frame Inter-chr q21.2 110326 ChimerSeq ChiTaRs ChiTaRs AIM1-AEBP1 AIM1 chr6 107018320 AEBP1 chr7 44153648 Exonic hg19 NA AA528240 Out-of-frame Inter-chr p13 Transcription factor 110327 ChimerSeq ChiTaRs ChiTaRs EPB41-PRG2 EPB41 chr1 29446532 PRG2 chr11 57175113 Exonic hg19 NA AI133070 Out-of-frame Inter-chr p35.3 Tumor suppressor gene q12.1 110328 ChimerSeq ChiTaRs ChiTaRs KIF3A-RAB2A KIF3A chr5 132047721 RAB2A chr8 61534100 Exonic hg19 NA AW998960 Out-of-frame Inter-chr q31.1 q12.1 110329 ChimerSeq ChiTaRs ChiTaRs KIAA1217-GALNT14 KIAA1217 chr10 24799687 GALNT14 chr2 31376003 Exonic hg19 NA CV383660 Out-of-frame Inter-chr p12.2 p23.1 110330 ChimerSeq ChiTaRs ChiTaRs MAEA-MAEA MAEA chr4 1333925 MAEA chr4 1333683 Exonic hg19 NA CB241800 3'UTR-3'UTR Intra-chr p16.3 p16.3 110331 ChimerSeq ChiTaRs ChiTaRs CFH-CFH CFH chr1 196643933 CFH chr1 196643634 Exonic hg19 NA CV350270 Out-of-frame Intra-chr q31.3 q31.3 110332 ChimerSeq ChiTaRs ChiTaRs TACC1-PLXNB2 TACC1 chr8 38710548 PLXNB2 chr22 50728748 Exonic hg19 NA AI964040 Out-of-frame Inter-chr p11.22 q13.33 110333 ChimerSeq ChiTaRs ChiTaRs PRRC2B-ZNF333 PRRC2B chr9 134371812 ZNF333 chr19 14828103 Exonic hg19 NA BE764180 Out-of-frame Inter-chr q34.13 p13.12 Transcription factor 110334 ChimerSeq ChiTaRs ChiTaRs CMPK1-BANK1 CMPK1 chr1 47820141 BANK1 chr4 102408760 Exonic hg19 NA BF873120 Out-of-frame Inter-chr p33 Oncogene q24 110335 ChimerSeq ChiTaRs ChiTaRs FAM160A2-KRT5 FAM160A2 chr11 6238783 KRT5 chr12 52908582 Exonic hg19 NA BG994840 Out-of-frame Inter-chr p15.4 q13.13 110336 ChimerSeq ChiTaRs ChiTaRs MDN1-MDN1 MDN1 chr6 90383555 MDN1 chr6 90380642 Exonic hg19 NA BE884350 Out-of-frame Intra-chr q15 q15 110337 ChimerSeq ChiTaRs ChiTaRs MYC-ZFP36 MYC chr8 128751310 ZFP36 chr19 39898260 Exonic hg19 NA AM287184 Out-of-frame Inter-chr q24.21 Oncogene Transcription factor q13.2 Tumor suppressor gene 110338 ChimerSeq ChiTaRs ChiTaRs TSC22D2-TSC22D2 TSC22D2 chr3 150134995 TSC22D2 chr3 150134266 Exonic hg19 NA DW418630 Out-of-frame Intra-chr q25.1 q25.1 110339 ChimerSeq ChiTaRs ChiTaRs PTGDS-FAM63A PTGDS chr9 139876196 FAM63A chr1 150970227 Exonic hg19 NA AW316630 Out-of-frame Inter-chr q34.3 110340 ChimerSeq ChiTaRs ChiTaRs ADI1-TUBB6 ADI1 chr2 3504659 TUBB6 chr18 12326076 Exonic hg19 NA BF095880 Out-of-frame Inter-chr p11.21 110341 ChimerSeq ChiTaRs ChiTaRs MAP4-KLF7 MAP4 chr3 48120185 KLF7 chr2 207975355 Exonic hg19 NA BI036770 Out-of-frame Inter-chr p21.31 q33.3 Transcription factor 110342 ChimerSeq ChiTaRs ChiTaRs WDR31-WDR31 WDR31 chr9 116077400 WDR31 chr9 116076793 Exonic hg19 NA AI569210 Out-of-frame Intra-chr q32 q32 110343 ChimerSeq ChiTaRs ChiTaRs KPNA5-LOC152217 KPNA5 chr6 117055887 LOC152217 chr3 196670119 Exonic hg19 NA AA207010 Out-of-frame Inter-chr q22.1 110344 ChimerSeq ChiTaRs ChiTaRs CAMTA1-LPAR3 CAMTA1 chr1 7553553 LPAR3 chr1 85356606 Exonic hg19 NA EL582550 Out-of-frame Intra-chr p36.31 Tumor suppressor gene Transcription factor p22.3 110345 ChimerSeq ChiTaRs ChiTaRs PSMD6-ZNF646 PSMD6 chr3 64009108 ZNF646 chr16 31088783 Exonic hg19 NA CD626170 Out-of-frame Inter-chr p14.1 p11.2 Transcription factor 110346 ChimerSeq ChiTaRs ChiTaRs PDCD10-HNRNPD PDCD10 chr3 167446632 HNRNPD chr4 83276455 Exonic hg19 NA BF096260 Out-of-frame Inter-chr q26.1 q21.22 110347 ChimerSeq ChiTaRs ChiTaRs RGS5-RGS5 RGS5 chr1 163115995 RGS5 chr1 163117002 Exonic hg19 NA AW961850 Out-of-frame Intra-chr q23.3 q23.3 110348 ChimerSeq ChiTaRs ChiTaRs CACNA1D-CACNA1D CACNA1D chr3 53603378 CACNA1D chr3 53612676 Exonic hg19 NA BF803210 Out-of-frame Intra-chr p21.1 p21.1 110349 ChimerSeq ChiTaRs ChiTaRs MDC1-AHCYL1 MDC1 chr6 2005207 AHCYL1 chr1 110563832 Exonic hg19 NA CA841960 Out-of-frame Inter-chr Tumor suppressor gene p13.3 Tumor suppressor gene 110350 ChimerSeq ChiTaRs ChiTaRs ANTXR2-RNF111 ANTXR2 chr4 80901409 RNF111 chr15 59358961 Exonic hg19 NA BF329240 Out-of-frame Inter-chr q21.21 q22.1 Tumor suppressor gene 110351 ChimerSeq ChiTaRs ChiTaRs ADAM9-ADAM9 ADAM9 chr8 38962518 ADAM9 chr8 38961665 Exonic hg19 NA BU686080 Out-of-frame Intra-chr 110352 ChimerSeq ChiTaRs ChiTaRs PTGES-SOX2-OT PTGES chr9 132500698 SOX2-OT chr3 181457795 Exonic hg19 NA T03380 Out-of-frame Inter-chr q34.11 q26.33 Oncogene Transcription factor 110353 ChimerSeq ChiTaRs ChiTaRs ZNF142-ZNF142 ZNF142 chr2 219503454 ZNF142 chr2 219507078 Exonic hg19 NA AL701230 Out-of-frame Intra-chr q35 Transcription factor q35 Transcription factor 110354 ChimerSeq ChiTaRs ChiTaRs SFTPB-TPT1 SFTPB chr2 85895312 TPT1 chr13 45914711 Exonic hg19 NA BI821350 Out-of-frame Inter-chr p11.2 q14.13 Seq+ 110355 ChimerSeq ChiTaRs ChiTaRs CUX1-MSI2 CUX1 chr7 101619416 MSI2 chr17 55679707 Exonic hg19 NA AW994070 Out-of-frame Inter-chr q22.1 Tumor suppressor gene Transcription factor q22 110356 ChimerSeq ChiTaRs ChiTaRs NBPF9-NBPF11 NBPF9 chr1 144995082 NBPF11 chr1 147917467 Exonic hg19 NA BC026270 Out-of-frame Intra-chr q21.2 q21.2 110357 ChimerSeq ChiTaRs ChiTaRs TNS1-C17orf72 TNS1 chr2 218781612 C17orf72 chr17 62081263 Exonic hg19 NA BF871720 Out-of-frame Inter-chr q35 110358 ChimerSeq ChiTaRs ChiTaRs MOB2-DHX38 MOB2 chr11 1774251 DHX38 chr16 72139508 Exonic hg19 NA BF852500 Out-of-frame Inter-chr p15.5 q22.2 110359 ChimerSeq ChiTaRs ChiTaRs GNB2L1-SRSF4 GNB2L1 chr5 180665186 SRSF4 chr1 29504198 Exonic hg19 NA AI914910 Out-of-frame Inter-chr Tumor suppressor gene p35.3 110360 ChimerSeq ChiTaRs ChiTaRs CNBP-CSNK2A1 CNBP chr3 128887013 CSNK2A1 chr20 523424 Exonic hg19 NA BG149780 Out-of-frame Inter-chr q21.3 p13 Oncogene 110361 ChimerSeq ChiTaRs ChiTaRs TRAPPC12-ABL2 TRAPPC12 chr2 3447603 ABL2 chr1 179069378 Exonic hg19 NA BF833240 Out-of-frame Inter-chr q25.2 TK:Abl Oncogene 110362 ChimerSeq ChiTaRs ChiTaRs SUB1-HNRNPA2B1 SUB1 chr5 32597105 HNRNPA2B1 chr7 26237003 Exonic hg19 NA AW373630 Out-of-frame Inter-chr p13.3 p15.2 110363 ChimerSeq ChiTaRs ChiTaRs TM2D1-TM2D1 TM2D1 chr1 62147002 TM2D1 chr1 62146718 Exonic hg19 NA AA648700 3'UTR-CDS Intra-chr p31.3 p31.3 110364 ChimerSeq ChiTaRs ChiTaRs APBB2-PACS1 APBB2 chr4 41125625 PACS1 chr11 66011881 Exonic hg19 NA BG619580 Out-of-frame Inter-chr p13 q13.1 110365 ChimerSeq ChiTaRs ChiTaRs LRRC27-MAGI1 LRRC27 chr10 134166333 MAGI1 chr3 65934197 Exonic hg19 NA BQ882250 Out-of-frame Inter-chr q26.3 Oncogene 110366 ChimerSeq ChiTaRs ChiTaRs TRIO-GLG1 TRIO chr5 14273827 GLG1 chr16 74496409 Exonic hg19 NA AW839130 Out-of-frame Inter-chr p15.2 q23.1 110367 ChimerSeq ChiTaRs ChiTaRs PLAGL1-DYNC1H1 PLAGL1 chr6 144281759 DYNC1H1 chr14 102516789 Exonic hg19 NA DR980000 Out-of-frame Inter-chr q24.2 Tumor suppressor gene Transcription factor q32.31 110368 ChimerSeq ChiTaRs ChiTaRs COL1A2-LTB4R COL1A2 chr7 94060247 LTB4R chr14 24783696 Exonic hg19 NA AW947290 Out-of-frame Inter-chr q21.3 q12 110369 ChimerSeq ChiTaRs ChiTaRs ARHGAP26-SMARCC2 ARHGAP26 chr5 142465056 SMARCC2 chr12 56574695 Exonic hg19 NA BE837660 Out-of-frame Inter-chr q31.3 q13.2 110370 ChimerSeq ChiTaRs ChiTaRs TAGLN3-TAGLN3 TAGLN3 chr3 111718329 TAGLN3 chr3 111718345 Exonic hg19 NA W28770 Out-of-frame Intra-chr q13.2 q13.2 110371 ChimerSeq ChiTaRs ChiTaRs SETX-PDE1C SETX chr9 135150759 PDE1C chr7 32108935 Exonic hg19 NA H11830 Out-of-frame Inter-chr q34.13 p14.3 110372 ChimerSeq ChiTaRs ChiTaRs AMPD3-PTMS AMPD3 chr11 10496054 PTMS chr12 6879812 Exonic hg19 NA AW882230 Out-of-frame Inter-chr p15.4 p13.31 110373 ChimerSeq ChiTaRs ChiTaRs NDUFA10-SLAIN2 NDUFA10 chr2 240900513 SLAIN2 chr4 48425588 Exonic hg19 NA AW169930 Out-of-frame Inter-chr p11 110374 ChimerSeq ChiTaRs ChiTaRs LOC344967-LOC344967 LOC344967 chr4 40053684 LOC344967 chr4 40053037 Exonic hg19 NA DB313670 Out-of-frame Intra-chr 110375 ChimerSeq ChiTaRs ChiTaRs C7orf31-RARS2 C7orf31 chr7 25219914 RARS2 chr6 88272426 Exonic hg19 NA DA751840 Out-of-frame Inter-chr p15.3 q15 110376 ChimerSeq ChiTaRs ChiTaRs CPB1-CPB1 CPB1 chr3 148577969 CPB1 chr3 148577880 Exonic hg19 NA T10370 Out-of-frame Intra-chr q24 q24 110377 ChimerSeq ChiTaRs ChiTaRs UBE3C-ZNF667 UBE3C chr7 156994322 ZNF667 chr19 56953603 Exonic hg19 NA BF327170 Out-of-frame Inter-chr q36.3 q13.43 Transcription factor 110378 ChimerSeq ChiTaRs ChiTaRs NLGN1-NCAM1 NLGN1 chr3 173417501 NCAM1 chr11 113085141 Exonic hg19 NA T07790 Out-of-frame Inter-chr q26.31 q23.2 110379 ChimerSeq ChiTaRs ChiTaRs SLC4A4-PIGU SLC4A4 chr4 72437761 PIGU chr20 33185380 Exonic hg19 NA CK823810 Out-of-frame Inter-chr q13.3 q11.22 110380 ChimerSeq ChiTaRs ChiTaRs IPO7-MB21D1 IPO7 chr11 9454372 MB21D1 chr6 74148800 Exonic hg19 NA BF878960 Out-of-frame Inter-chr p15.4 q13 110381 ChimerSeq ChiTaRs ChiTaRs RHOA-LARP7 RHOA chr3 49412267 LARP7 chr4 113570709 Exonic hg19 NA CN419690 Out-of-frame Inter-chr p21.31 Oncogene Tumor suppressor gene q25 110382 ChimerSeq ChiTaRs ChiTaRs PPP1R18-PNMA5 PPP1R18 chr6 1976835 PNMA5 chrX 152159705 Exonic hg19 NA BX392220 Out-of-frame Inter-chr p21.33 q28 110383 ChimerSeq ChiTaRs ChiTaRs FTX-PITPNA FTX chrX 73491647 PITPNA chr17 1422402 Exonic hg19 NA BQ329410 Out-of-frame Inter-chr q13.2 p13.3 110384 ChimerSeq ChiTaRs ChiTaRs RAB1A-SLC35D1 RAB1A chr2 65315454 SLC35D1 chr1 67473085 Exonic hg19 NA BE773550 Out-of-frame Inter-chr p14 p31.3 110385 ChimerSeq ChiTaRs ChiTaRs MCL1-MCL1 MCL1 chr1 150547234 MCL1 chr1 150547225 Exonic hg19 NA BI491020 Out-of-frame Intra-chr q21.2 Oncogene q21.2 Oncogene 110386 ChimerSeq ChiTaRs ChiTaRs FGF1-C16orf62 FGF1 chr5 142065687 C16orf62 chr16 19641112 Exonic hg19 NA DA205510 Out-of-frame Inter-chr q31.3 p12.3 110387 ChimerSeq ChiTaRs ChiTaRs AKT3-AKT3 AKT3 chr1 244006586 AKT3 chr1 243708811 Exonic hg19 NA AW901930 5'UTR-CDS Intra-chr AGC:Akt Oncogene AGC:Akt Oncogene 110388 ChimerSeq ChiTaRs ChiTaRs RPL11-EPHX1 RPL11 chr1 24020406 EPHX1 chr1 226027547 Exonic hg19 NA BE613010 Out-of-frame Intra-chr p36.11 Tumor suppressor gene q42.12 110389 ChimerSeq ChiTaRs ChiTaRs PTPRF-PTPRF PTPRF chr1 44089185 PTPRF chr1 44089170 Exonic hg19 NA AA527940 Out-of-frame Intra-chr p34.2 p34.2 110390 ChimerSeq ChiTaRs ChiTaRs TDP2-TDP2 TDP2 chr6 24650692 TDP2 chr6 24650931 Exonic hg19 NA BG896990 Out-of-frame Intra-chr p22.3 p22.3 110391 ChimerSeq ChiTaRs ChiTaRs CHMP3-CHMP3 CHMP3 chr2 86732975 CHMP3 chr2 86734653 Exonic hg19 NA BI051970 Out-of-frame Intra-chr p11.2 p11.2 110392 ChimerSeq ChiTaRs ChiTaRs IKBKB-IKBKB IKBKB chr8 42177593 IKBKB chr8 42177953 Exonic hg19 NA CA436950 Out-of-frame Intra-chr p11.21 Oncogene p11.21 Oncogene 110393 ChimerSeq ChiTaRs ChiTaRs ITPR3-ITPR3 ITPR3 chr6 33662107 ITPR3 chr6 33662251 Exonic hg19 NA CB306680 Out-of-frame Intra-chr p21.31 p21.31 110394 ChimerSeq ChiTaRs ChiTaRs RELL2-CHD4 RELL2 chr5 141020630 CHD4 chr12 6703793 Exonic hg19 NA DB340550 Out-of-frame Inter-chr q31.3 p13.31 110395 ChimerSeq ChiTaRs ChiTaRs AKIRIN2-CTNNA3 AKIRIN2 chr6 88411144 CTNNA3 chr10 68913794 Exonic hg19 NA AF119870 Out-of-frame Inter-chr q15 q21.3 Tumor suppressor gene 110396 ChimerSeq ChiTaRs ChiTaRs CAMK1D-PDLIM5 CAMK1D chr10 12699864 PDLIM5 chr4 95388729 Exonic hg19 NA CV321930 Out-of-frame Inter-chr p13 q22.3 110397 ChimerSeq ChiTaRs ChiTaRs PSAP-PSAP PSAP chr10 73577090 PSAP chr10 73576741 Exonic hg19 NA BF733880 Out-of-frame Intra-chr q22.1 q22.1 110398 ChimerSeq ChiTaRs ChiTaRs UCK2-PID1 UCK2 chr1 165867173 PID1 chr2 229890125 Exonic hg19 NA BU929920 Out-of-frame Inter-chr q24.1 q36.3 110399 ChimerSeq ChiTaRs ChiTaRs C8orf12-FGD1 C8orf12 chr8 11282080 FGD1 chrX 54492591 Exonic hg19 NA AW409320 Out-of-frame Inter-chr p11.22 110400 ChimerSeq ChiTaRs ChiTaRs DVL3-DVL3 DVL3 chr3 183882958 DVL3 chr3 183873469 Exonic hg19 NA BI031840 Out-of-frame Intra-chr q27.1 q27.1 110401 ChimerSeq ChiTaRs ChiTaRs SGK196-MLL4 SGK196 chr8 42955637 MLL4 chr19 36225270 Exonic hg19 NA BF763960 Out-of-frame Inter-chr 110402 ChimerSeq ChiTaRs ChiTaRs SELENBP1-UBE4B SELENBP1 chr1 151337133 UBE4B chr1 10240338 Exonic hg19 NA AA176720 Out-of-frame Intra-chr q21.3 Tumor suppressor gene p36.22 Tumor suppressor gene 110403 ChimerSeq ChiTaRs ChiTaRs ACTA1-GAS7 ACTA1 chr1 229567617 GAS7 chr17 9820514 Exonic hg19 NA BG998390 Out-of-frame Inter-chr q42.13 p13.1 110404 ChimerSeq ChiTaRs ChiTaRs PTMA-CREM PTMA chr2 232576688 CREM chr10 35500204 Exonic hg19 NA CB985250 Out-of-frame Inter-chr q37.1 p11.21 Tumor suppressor gene Transcription factor 110405 ChimerSeq ChiTaRs ChiTaRs CGA-CDC42BPB CGA chr6 87795326 CDC42BPB chr14 103488300 Exonic hg19 NA R02040 Out-of-frame Inter-chr q14.3 q32.32 110406 ChimerSeq ChiTaRs ChiTaRs NR3C1-NR3C1 NR3C1 chr5 142658441 NR3C1 chr5 142658431 Exonic hg19 NA AA730920 Out-of-frame Intra-chr q31.3 Transcription factor q31.3 Transcription factor 110407 ChimerSeq ChiTaRs ChiTaRs MED23-MED23 MED23 chr6 131932488 MED23 chr6 131932481 Exonic hg19 NA AA648640 Out-of-frame Intra-chr q23.2 q23.2 110408 ChimerSeq ChiTaRs ChiTaRs TKT-YLPM1 TKT chr3 53264500 YLPM1 chr14 75269354 Exonic hg19 NA BE741860 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q24.3 110409 ChimerSeq ChiTaRs ChiTaRs SH3BP4-SH3BP4 SH3BP4 chr2 235928521 SH3BP4 chr2 235931797 Exonic hg19 NA T56440 Out-of-frame Intra-chr q37.2 q37.2 110410 ChimerSeq ChiTaRs ChiTaRs PAPPA-MEIS2 PAPPA chr9 119159313 MEIS2 chr15 37324385 Exonic hg19 NA AA368320 Out-of-frame Inter-chr q33.1 q14 Transcription factor 110411 ChimerSeq ChiTaRs ChiTaRs DCP2-DCP2 DCP2 chr5 112357100 DCP2 chr5 112356368 Exonic hg19 NA CA945240 Out-of-frame Intra-chr q22.2 q22.2 110412 ChimerSeq ChiTaRs ChiTaRs CADM3-CALM3 CADM3 chr1 159172343 CALM3 chr19 47113040 Exonic hg19 NA BF947810 Out-of-frame Inter-chr q23.2 Tumor suppressor gene q13.32 110413 ChimerSeq ChiTaRs ChiTaRs RAP1A-RAP1A RAP1A chr1 112255734 RAP1A chr1 112255573 Exonic hg19 NA AA525220 Out-of-frame Intra-chr p13.2 Tumor suppressor gene p13.2 Tumor suppressor gene 110414 ChimerSeq ChiTaRs ChiTaRs DLG3-SPTBN1 DLG3 chrX 69691662 SPTBN1 chr2 54885086 Exonic hg19 NA BE699000 Out-of-frame Inter-chr q13.1 p16.2 Tumor suppressor gene 110415 ChimerSeq ChiTaRs ChiTaRs SLC41A1-SLC41A1 SLC41A1 chr1 205779896 SLC41A1 chr1 205768902 Exonic hg19 NA BF989690 Out-of-frame Intra-chr q32.1 q32.1 110416 ChimerSeq ChiTaRs ChiTaRs NUCKS1-WNK1 NUCKS1 chr1 205686678 WNK1 chr12 977986 Exonic hg19 NA AI990890 Out-of-frame Inter-chr q32.1 p13.33 110417 ChimerSeq ChiTaRs ChiTaRs PEA15-CDH2 PEA15 chr1 160184816 CDH2 chr18 25573462 Exonic hg19 NA T06950 Out-of-frame Inter-chr q23.2 Tumor suppressor gene q12.1 Oncogene 110418 ChimerSeq ChiTaRs ChiTaRs C1GALT1C1-C1GALT1C1 C1GALT1C1 chrX 119760648 C1GALT1C1 chrX 119760501 Exonic hg19 NA T10800 Out-of-frame Intra-chr q24 q24 110419 ChimerSeq ChiTaRs ChiTaRs ITM2C-NUMA1 ITM2C chr2 231738262 NUMA1 chr11 71724549 Exonic hg19 NA BE835080 Out-of-frame Inter-chr q37.1 q13.4 Oncogene 110420 ChimerSeq ChiTaRs ChiTaRs HNRNPH1-MRPS24 HNRNPH1 chr5 179050656 MRPS24 chr7 43906157 Exonic hg19 NA W51800 Out-of-frame Inter-chr q35.3 p13 110421 ChimerSeq ChiTaRs ChiTaRs EPC2-CSTA EPC2 chr2 149528956 CSTA chr3 122044130 Exonic hg19 NA BE840750 CDS-5'UTR Inter-chr q23.1 q21.1 110422 ChimerSeq ChiTaRs ChiTaRs PHLDB2-RBM47 PHLDB2 chr3 111680620 RBM47 chr4 40540103 Exonic hg19 NA BE004180 Out-of-frame Inter-chr q13.2 p14 110423 ChimerSeq ChiTaRs ChiTaRs LCOR-LCOR LCOR chr10 98718663 LCOR chr10 98719137 Exonic hg19 NA AI684720 Out-of-frame Intra-chr q24.1 Transcription factor q24.1 Transcription factor 110424 ChimerSeq ChiTaRs ChiTaRs STOML2-PIM2 STOML2 chr9 35101012 PIM2 chrX 48770462 Exonic hg19 NA BU730150 Out-of-frame Inter-chr p13.3 p11.23 CAMK:PIM 110425 ChimerSeq ChiTaRs ChiTaRs FBXO32-MYEOV FBXO32 chr8 124516965 MYEOV chr11 69155834 Exonic hg19 NA BF828660 Out-of-frame Inter-chr q24.13 Tumor suppressor gene q13.3 110426 ChimerSeq ChiTaRs ChiTaRs PAPPA-RPGR PAPPA chr9 119162349 RPGR chrX 38179260 Exonic hg19 NA BQ365670 Out-of-frame Inter-chr q33.1 p11.4 110427 ChimerSeq ChiTaRs ChiTaRs IKZF1-IKZF1 IKZF1 chr7 50358925 IKZF1 chr7 50367206 Exonic hg19 NA AI241390 Out-of-frame Intra-chr p12.2 Oncogene Tumor suppressor gene Transcription factor p12.2 Oncogene Tumor suppressor gene Transcription factor 110428 ChimerSeq ChiTaRs ChiTaRs RAB2A-RAB2A RAB2A chr8 61429716 RAB2A chr8 61429758 Exonic hg19 NA R68100 Out-of-frame Intra-chr q12.1 q12.1 110429 ChimerSeq ChiTaRs ChiTaRs BAG2-BAG2 BAG2 chr6 57049030 BAG2 chr6 57048998 Exonic hg19 NA BG391200 Out-of-frame Intra-chr p12.1 p12.1 110430 ChimerSeq ChiTaRs ChiTaRs RBM5-EPHA6 RBM5 chr3 50152936 EPHA6 chr3 97285141 Exonic hg19 NA AW858870 Out-of-frame Intra-chr p21.31 Tumor suppressor gene q11.2 110431 ChimerSeq ChiTaRs ChiTaRs DUSP10-GNAL DUSP10 chr1 221906300 GNAL chr18 11867165 Exonic hg19 NA DA291290 Out-of-frame Inter-chr q41 p11.21 110432 ChimerSeq ChiTaRs ChiTaRs GALNT2-AUTS2 GALNT2 chr1 230301899 AUTS2 chr7 69722942 Exonic hg19 NA AW015340 Out-of-frame Inter-chr q42.13 q11.22 110433 ChimerSeq ChiTaRs ChiTaRs PPP3CA-ACTL6A PPP3CA chr4 102249738 ACTL6A chr3 179280714 Exonic hg19 NA DA647290 Out-of-frame Inter-chr q24 q26.33 110434 ChimerSeq ChiTaRs ChiTaRs CTSB-MACROD2 CTSB chr8 11700877 MACROD2 chr20 14133337 Exonic hg19 NA BE178430 Out-of-frame Inter-chr p23.1 p12.1 110435 ChimerSeq ChiTaRs ChiTaRs VEGFA-SUZ12P1 VEGFA chr6 43753504 SUZ12P1 chr17 29096353 Exonic hg19 NA AW610270 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q11.2 110436 ChimerSeq ChiTaRs ChiTaRs DEGS1-CDC73 DEGS1 chr1 224380087 CDC73 chr1 193189506 Exonic hg19 NA AI167570 Out-of-frame Intra-chr q42.11 q31.2 Oncogene Tumor suppressor gene 110437 ChimerSeq ChiTaRs ChiTaRs HLA-DQA1-HLA-DRA HLA-DQA1 chr6 32609335 HLA-DRA chr6 3757623 Exonic hg19 NA AF522250 Out-of-frame Intra-chr 110438 ChimerSeq ChiTaRs ChiTaRs NOL10-UTRN NOL10 chr2 10794919 UTRN chr6 144773909 Exonic hg19 NA BE969750 Out-of-frame Inter-chr p25.1 q24.2 110439 ChimerSeq ChiTaRs ChiTaRs RHOU-RHOU RHOU chr1 228879997 RHOU chr1 228879974 Exonic hg19 NA BU607370 Out-of-frame Intra-chr q42.13 q42.13 110440 ChimerSeq ChiTaRs ChiTaRs KIF1B-RPS6KA2 KIF1B chr1 10429061 RPS6KA2 chr6 167230123 Exonic hg19 NA AA775960 Out-of-frame Inter-chr p36.22 Tumor suppressor gene q27 Oncogene Tumor suppressor gene 110441 ChimerSeq ChiTaRs ChiTaRs DAB2IP-DAB2IP DAB2IP chr9 124547809 DAB2IP chr9 124547469 Exonic hg19 NA BM968130 3'UTR-3'UTR Intra-chr q33.2 Tumor suppressor gene q33.2 Tumor suppressor gene 110442 ChimerSeq ChiTaRs ChiTaRs AVL9-PTTG1IP AVL9 chr7 32660689 PTTG1IP chr21 46276871 Exonic hg19 NA BI022190 Out-of-frame Inter-chr p14.3 q22.3 110443 ChimerSeq ChiTaRs ChiTaRs MYOZ2-MYOZ2 MYOZ2 chr4 120085546 MYOZ2 chr4 120085507 Exonic hg19 NA BF825570 Out-of-frame Intra-chr q26 q26 110444 ChimerSeq ChiTaRs ChiTaRs CADM3-DDX42 CADM3 chr1 159173102 DDX42 chr17 61892943 Exonic hg19 NA DB315810 Out-of-frame Inter-chr q23.2 Tumor suppressor gene q23.3 110445 ChimerSeq ChiTaRs ChiTaRs HMGB2-EARS2 HMGB2 chr4 174254307 EARS2 chr16 23535431 Exonic hg19 NA AW605160 Out-of-frame Inter-chr q34.1 p12.2 110446 ChimerSeq ChiTaRs ChiTaRs CHI3L1-NEDD4L CHI3L1 chr1 203148220 NEDD4L chr18 55798739 Exonic hg19 NA BQ181650 Out-of-frame Inter-chr q32.1 q21.31 Tumor suppressor gene 110447 ChimerSeq ChiTaRs ChiTaRs NUDT3-NUDT3 NUDT3 chr6 34305043 NUDT3 chr6 34304762 Exonic hg19 NA AW972150 Out-of-frame Intra-chr p21.31 p21.31 110448 ChimerSeq ChiTaRs ChiTaRs NSMF-JAG2 NSMF chr9 140342102 JAG2 chr14 105608528 Exonic hg19 NA BE908930 Out-of-frame Inter-chr q34.3 q32.33 110449 ChimerSeq ChiTaRs ChiTaRs MCC-MCC MCC chr5 112358322 MCC chr5 112358215 Exonic hg19 NA AA328920 Out-of-frame Intra-chr q22.2 Tumor suppressor gene q22.2 Tumor suppressor gene 110450 ChimerSeq ChiTaRs ChiTaRs FGF12-OPA1 FGF12 chr3 192445333 OPA1 chr3 193409850 Exonic hg19 NA DA123600 Out-of-frame Intra-chr q29 q29 110451 ChimerSeq ChiTaRs ChiTaRs TIA1-ZFYVE26 TIA1 chr2 70458994 ZFYVE26 chr14 68228578 Exonic hg19 NA BE172300 Out-of-frame Inter-chr p13.3 q24.1 110452 ChimerSeq ChiTaRs ChiTaRs FAM114A1-FAM114A1 FAM114A1 chr4 38916366 FAM114A1 chr4 38931746 Exonic hg19 NA BE928450 Out-of-frame Intra-chr p14 p14 110453 ChimerSeq ChiTaRs ChiTaRs FOXJ3-FOXJ3 FOXJ3 chr1 42652371 FOXJ3 chr1 42652305 Exonic hg19 NA BF925020 Out-of-frame Intra-chr p34.2 Transcription factor p34.2 Transcription factor 110454 ChimerSeq ChiTaRs ChiTaRs TRA2B-LOC100128164 TRA2B chr3 185649641 LOC100128164 chr3 169683764 Exonic hg19 NA AA970190 Out-of-frame Intra-chr q27.2 110455 ChimerSeq ChiTaRs ChiTaRs ATAD2-ATAD2 ATAD2 chr8 124332706 ATAD2 chr8 124332671 Exonic hg19 NA BU679400 Out-of-frame Intra-chr q24.13 q24.13 110456 ChimerSeq ChiTaRs ChiTaRs EPAS1-AFF3 EPAS1 chr2 46530359 AFF3 chr2 100573240 Exonic hg19 NA BI011520 Out-of-frame Intra-chr p21 Tumor suppressor gene Transcription factor q11.2 Oncogene 110457 ChimerSeq ChiTaRs ChiTaRs HYAL2-HYAL2 HYAL2 chr3 50357271 HYAL2 chr3 50357558 Exonic hg19 NA CF131370 Out-of-frame Intra-chr p21.31 p21.31 110458 ChimerSeq ChiTaRs ChiTaRs CDA-GNPTAB CDA chr1 21310549 GNPTAB chr12 102140628 Exonic hg19 NA BU634160 Out-of-frame Inter-chr p36.12 q23.2 110459 ChimerSeq ChiTaRs ChiTaRs NCEH1-NCEH1 NCEH1 chr3 172351618 NCEH1 chr3 172351624 Exonic hg19 NA BF803350 Out-of-frame Intra-chr q26.31 q26.31 110460 ChimerSeq ChiTaRs ChiTaRs PDP1-APPL1 PDP1 chr8 94930528 APPL1 chr3 57306893 Exonic hg19 NA BG776390 Out-of-frame Inter-chr q22.1 p14.3 110461 ChimerSeq ChiTaRs ChiTaRs STATH-CHRM3 STATH chr4 70868170 CHRM3 chr1 239615753 Exonic hg19 NA BX487190 Out-of-frame Inter-chr q43 110462 ChimerSeq ChiTaRs ChiTaRs CDC42BPA-RDX CDC42BPA chr1 227411932 RDX chr11 110159603 Exonic hg19 NA H96470 Out-of-frame Inter-chr q42.13 q22.3 110463 ChimerSeq ChiTaRs ChiTaRs KIAA2026-TMEM232 KIAA2026 chr9 6007234 TMEM232 chr5 110036315 Exonic hg19 NA BQ376550 Out-of-frame Inter-chr p24.1 q22.1 110464 ChimerSeq ChiTaRs ChiTaRs CAPZB-MYLK CAPZB chr1 19796086 MYLK chr3 123353449 Exonic hg19 NA BF358800 Out-of-frame Inter-chr p36.13 q21.1 110465 ChimerSeq ChiTaRs ChiTaRs AKAP9-NADK2 AKAP9 chr7 91709221 NADK2 chr5 36223796 Exonic hg19 NA BE839380 Out-of-frame Inter-chr q21.2 Oncogene p13.2 110466 ChimerSeq ChiTaRs ChiTaRs TALDO1-TALDO1 TALDO1 chr11 763485 TALDO1 chr11 763885 Exonic hg19 NA CV375270 Out-of-frame Intra-chr p15.5 p15.5 110467 ChimerSeq ChiTaRs ChiTaRs NCDN-PDGFRA NCDN chr1 36032374 PDGFRA chr4 55164280 Exonic hg19 NA BU682470 Out-of-frame Inter-chr p34.3 q12 Oncogene 110468 ChimerSeq ChiTaRs ChiTaRs GIMAP2-GIMAP2 GIMAP2 chr7 150388138 GIMAP2 chr7 150389719 Exonic hg19 NA BE763960 Out-of-frame Intra-chr q36.1 q36.1 110469 ChimerSeq ChiTaRs ChiTaRs TBC1D31-ZNF704 TBC1D31 chr8 124096582 ZNF704 chr8 81733744 Exonic hg19 NA XX000017 Out-of-frame Intra-chr q24.13 q21.13 Transcription factor 110470 ChimerSeq ChiTaRs ChiTaRs PDCD6IP-ARHGAP21 PDCD6IP chr3 33909505 ARHGAP21 chr10 24899836 Exonic hg19 NA BF094120 Out-of-frame Inter-chr p22.3 p12.1 110471 ChimerSeq ChiTaRs ChiTaRs GSK3B-NCALD GSK3B chr3 119542625 NCALD chr8 102699356 Exonic hg19 NA BG014470 Out-of-frame Inter-chr q13.33 CMGC:GSK Tumor suppressor gene q22.3 110472 ChimerSeq ChiTaRs ChiTaRs ABLIM1-WBP2 ABLIM1 chr10 116191373 WBP2 chr17 73849572 Exonic hg19 NA BF923600 Out-of-frame Inter-chr q25.3 q25.1 110473 ChimerSeq ChiTaRs ChiTaRs DNAI1-MSH2 DNAI1 chr9 34485935 MSH2 chr2 47624999 Exonic hg19 NA BE143970 Out-of-frame Inter-chr p13.3 p21 Oncogene Tumor suppressor gene 110474 ChimerSeq ChiTaRs ChiTaRs PREB-PREB PREB chr2 27355770 PREB chr2 27356056 Exonic hg19 NA AW968190 Out-of-frame Intra-chr p23.3 Transcription factor p23.3 Transcription factor 110475 ChimerSeq ChiTaRs ChiTaRs DNMBP-PAPPA2 DNMBP chr10 101681108 PAPPA2 chr1 176525010 Exonic hg19 NA BI048360 Out-of-frame Inter-chr q24.2 q25.2 110476 ChimerSeq ChiTaRs ChiTaRs ANKHD1-PCDH1 ANKHD1 chr5 139825560 PCDH1 chr5 141233958 Exonic hg19 NA XX000011 In-Frame Intra-chr q31.3 q31.3 110477 ChimerSeq ChiTaRs ChiTaRs PARG-VARS PARG chr10 51590114 VARS chr6 3079091 Exonic hg19 NA R32780 Out-of-frame Inter-chr q11.23 110478 ChimerSeq ChiTaRs ChiTaRs BHLHE40-FBXL17 BHLHE40 chr3 5026793 FBXL17 chr5 107488350 Exonic hg19 NA M78300 Out-of-frame Inter-chr p26.1 Transcription factor q21.3 110479 ChimerSeq ChiTaRs ChiTaRs SYT2-PPFIA4 SYT2 chr1 202612581 PPFIA4 chr1 203047731 Exonic hg19 NA AK094430 5'UTR-3'UTR Intra-chr q32.1 q32.1 110480 ChimerSeq ChiTaRs ChiTaRs PION-PION PION chr7 76940400 PION chr7 76940177 Exonic hg19 NA AA665030 Out-of-frame Intra-chr 110481 ChimerSeq ChiTaRs ChiTaRs FAM54B-BROX FAM54B chr1 26158505 BROX chr1 222904807 Exonic hg19 NA BF089900 Out-of-frame Intra-chr q41 110482 ChimerSeq ChiTaRs ChiTaRs SPARCL1-PKP4 SPARCL1 chr4 88416186 PKP4 chr2 159519443 Exonic hg19 NA BF951590 Out-of-frame Inter-chr q22.1 Tumor suppressor gene q24.1 110483 ChimerSeq ChiTaRs ChiTaRs NFE2L2-KIF5B NFE2L2 chr2 178167146 KIF5B chr10 32321675 Exonic hg19 NA AW379430 Out-of-frame Inter-chr q31.2 Oncogene Transcription factor p11.22 110484 ChimerSeq ChiTaRs ChiTaRs ANKHD1-ANKHD1 ANKHD1 chr5 139916223 ANKHD1 chr5 139916208 Exonic hg19 NA AI783650 Out-of-frame Intra-chr q31.3 q31.3 110485 ChimerSeq ChiTaRs ChiTaRs MFAP3L-MFAP3L MFAP3L chr4 170908746 MFAP3L chr4 170908283 Exonic hg19 NA BE073870 Out-of-frame Intra-chr q33 q33 110486 ChimerSeq ChiTaRs ChiTaRs LOC151009-MGAT4C LOC151009 chr2 111140989 MGAT4C chr12 86372524 Exonic hg19 NA AB024730 Out-of-frame Inter-chr 110487 ChimerSeq ChiTaRs ChiTaRs FKBP5-FKBP5 FKBP5 chr6 35547926 FKBP5 chr6 35544922 Exonic hg19 NA BF818520 Out-of-frame Intra-chr p21.31 p21.31 110488 ChimerSeq ChiTaRs ChiTaRs DDX43-NUDCD3 DDX43 chr6 74112988 NUDCD3 chr7 44466034 Exonic hg19 NA BI029590 Out-of-frame Inter-chr q13 p13 110489 ChimerSeq ChiTaRs ChiTaRs DHDDS-VPS13D DHDDS chr1 26761789 VPS13D chr1 12316388 Exonic hg19 NA AW837680 Out-of-frame Intra-chr p36.11 p36.22 110490 ChimerSeq ChiTaRs ChiTaRs KLHL3-MAPKBP1 KLHL3 chr5 137071704 MAPKBP1 chr15 42119417 Exonic hg19 NA AK098190 Out-of-frame Inter-chr q31.2 q15.1 110491 ChimerSeq ChiTaRs ChiTaRs PNKD-PAPSS1 PNKD chr2 219195765 PAPSS1 chr4 108535341 Exonic hg19 NA CB216910 Out-of-frame Inter-chr q35 q25 110492 ChimerSeq ChiTaRs ChiTaRs SRRM1-SRRM1 SRRM1 chr1 24979119 SRRM1 chr1 24979402 Exonic hg19 NA BF946590 Out-of-frame Intra-chr p36.11 p36.11 110493 ChimerSeq ChiTaRs ChiTaRs TM4SF1-TM4SF1 TM4SF1 chr3 149087086 TM4SF1 chr3 149087056 Exonic hg19 NA AW131300 Out-of-frame Intra-chr q25.1 q25.1 110494 ChimerSeq ChiTaRs ChiTaRs SLC1A3-RHBDD3 SLC1A3 chr5 36633874 RHBDD3 chr22 29660162 Exonic hg19 NA BI036360 Out-of-frame Inter-chr p13.2 q12.2 110495 ChimerSeq ChiTaRs ChiTaRs RABGAP1L-CD68 RABGAP1L chr1 174887653 CD68 chr17 7483184 Exonic hg19 NA AW015760 Out-of-frame Inter-chr q25.1 p13.1 110496 ChimerSeq ChiTaRs ChiTaRs GUCY1A3-GPM6A GUCY1A3 chr4 156654653 GPM6A chr4 176594919 Exonic hg19 NA DA290840 Out-of-frame Intra-chr q32.1 q34.2 110497 ChimerSeq ChiTaRs ChiTaRs MAP3K8-MAP3K8 MAP3K8 chr10 30728219 MAP3K8 chr10 30726306 Exonic hg19 NA CB240670 Out-of-frame Intra-chr p11.23 STE:STE11 Tumor suppressor gene p11.23 STE:STE11 Tumor suppressor gene 110498 ChimerSeq ChiTaRs ChiTaRs UBE2K-UBE2K UBE2K chr4 39747346 UBE2K chr4 39739134 Exonic hg19 NA BF667380 Out-of-frame Intra-chr p14 p14 110499 ChimerSeq ChiTaRs ChiTaRs NDUFAF4-NDUFAF4 NDUFAF4 chr6 97338941 NDUFAF4 chr6 97339100 Exonic hg19 NA BU680050 Out-of-frame Intra-chr q16.1 q16.1 110500 ChimerSeq ChiTaRs ChiTaRs USMG5-USMG5 USMG5 chr10 105149563 USMG5 chr10 105149913 Exonic hg19 NA AW862550 Out-of-frame Intra-chr q24.33 q24.33 110501 ChimerSeq ChiTaRs ChiTaRs RNF19A-RNF19A RNF19A chr8 101322171 RNF19A chr8 101272196 Exonic hg19 NA AU154830 Out-of-frame Intra-chr q22.2 q22.2 110502 ChimerSeq ChiTaRs ChiTaRs CPNE4-USP48 CPNE4 chr3 131566318 USP48 chr1 22054344 Exonic hg19 NA BP396500 Out-of-frame Inter-chr q22.1 p36.12 110503 ChimerSeq ChiTaRs ChiTaRs SMC5-MYH13 SMC5 chr9 72969786 MYH13 chr17 10217667 Exonic hg19 NA AA404360 Out-of-frame Inter-chr q21.12 p13.1 110504 ChimerSeq ChiTaRs ChiTaRs HNRNPUL2-NR4A1 HNRNPUL2 chr11 62489612 NR4A1 chr12 52444388 Exonic hg19 NA BI909860 Out-of-frame Inter-chr q12.3 q13.13 Tumor suppressor gene Transcription factor 110505 ChimerSeq ChiTaRs ChiTaRs CAMK2N1-CAMK2N1 CAMK2N1 chr1 20809660 CAMK2N1 chr1 20809625 Exonic hg19 NA BI913410 Out-of-frame Intra-chr p36.12 Tumor suppressor gene p36.12 Tumor suppressor gene 110506 ChimerSeq ChiTaRs ChiTaRs AKAP12-AKAP12 AKAP12 chr6 151676935 AKAP12 chr6 151674309 Exonic hg19 NA BM721250 Out-of-frame Intra-chr q25.1 Tumor suppressor gene q25.1 Tumor suppressor gene 110507 ChimerSeq ChiTaRs ChiTaRs ELP4-KLHDC10 ELP4 chr11 31548024 KLHDC10 chr7 129775319 Exonic hg19 NA M62120 Out-of-frame Inter-chr p13 q32.2 110508 ChimerSeq ChiTaRs ChiTaRs MACF1-MARC2 MACF1 chr1 39796224 2002_ 3_ 1_ chr1 220941199 Exonic hg19 NA BF770570 Out-of-frame Intra-chr p34.3 110509 ChimerSeq ChiTaRs ChiTaRs SLC11A1-SLC11A1 SLC11A1 chr2 219259358 SLC11A1 chr2 219248410 Exonic hg19 NA BC037550 Out-of-frame Intra-chr q35 q35 110510 ChimerSeq ChiTaRs ChiTaRs C6-HUWE1 C6 chr5 41153974 HUWE1 chrX 53621462 Exonic hg19 NA BE764210 Out-of-frame Inter-chr p13.1 p11.22 110511 ChimerSeq ChiTaRs ChiTaRs PGM2-PGM2 PGM2 chr4 37841758 PGM2 chr4 37836313 Exonic hg19 NA AA410910 Out-of-frame Intra-chr p14 p14 110512 ChimerSeq ChiTaRs ChiTaRs UROD-UROD UROD chr1 45481492 UROD chr1 45479387 Exonic hg19 NA AA368910 Out-of-frame Intra-chr p34.1 p34.1 110513 ChimerSeq ChiTaRs ChiTaRs UTP14A-TRAF3 UTP14A chrX 129048976 TRAF3 chr14 103265993 Exonic hg19 NA AW860540 Out-of-frame Inter-chr q26.1 q32.32 110514 ChimerSeq ChiTaRs ChiTaRs ALCAM-TBC1D12 ALCAM chr3 105222226 TBC1D12 chr10 96201653 Exonic hg19 NA BF747790 Out-of-frame Inter-chr q13.11 q23.33 110515 ChimerSeq ChiTaRs ChiTaRs EPCAM-HERC3 EPCAM chr2 47613781 HERC3 chr4 89573295 Exonic hg19 NA BE177710 Out-of-frame Inter-chr p21 q22.1 110516 ChimerSeq ChiTaRs ChiTaRs TRIM68-TRIM68 TRIM68 chr11 4626525 TRIM68 chr11 4620288 Exonic hg19 NA CB217200 Out-of-frame Intra-chr p15.4 p15.4 110517 ChimerSeq ChiTaRs ChiTaRs ABHD14B-COL7A1 ABHD14B chr3 52007850 COL7A1 chr3 48627180 Exonic hg19 NA BU615800 Out-of-frame Intra-chr p21.2 p21.31 110518 ChimerSeq ChiTaRs ChiTaRs UTY-UTY UTY chrY 15359372 UTY chrY 15358063 Exonic hg19 NA AA744810 Out-of-frame Intra-chr q11.221 q11.221 110519 ChimerSeq ChiTaRs ChiTaRs CCDC80-PTPRC CCDC80 chr3 112324340 PTPRC chr1 198718580 Exonic hg19 NA AI587210 Out-of-frame Inter-chr q13.2 Tumor suppressor gene 110520 ChimerSeq ChiTaRs ChiTaRs ADK-ZNF644 ADK chr10 76300815 ZNF644 chr1 91394007 Exonic hg19 NA BM671160 Out-of-frame Inter-chr q22.2 p22.2 Transcription factor 110521 ChimerSeq ChiTaRs ChiTaRs ARPC2-CHDH ARPC2 chr2 219100136 CHDH chr3 53850949 Exonic hg19 NA BF930030 Out-of-frame Inter-chr q35 p21.1 110522 ChimerSeq ChiTaRs ChiTaRs FAM73A-BOLA2 FAM73A chr1 78296562 BOLA2 chr16 30080881 Exonic hg19 NA AA380090 Out-of-frame Inter-chr p11.2 110523 ChimerSeq ChiTaRs ChiTaRs CTSL1-CTSL1 CTSL1 chr9 90343308 CTSL1 chr9 90343550 Exonic hg19 NA BF994660 Out-of-frame Intra-chr 110524 ChimerSeq ChiTaRs ChiTaRs ACBD5-SH3BP4 ACBD5 chr10 27484264 SH3BP4 chr2 235964016 Exonic hg19 NA BF507610 Out-of-frame Inter-chr p12.1 q37.2 110525 ChimerSeq ChiTaRs ChiTaRs TNFSF4-CIR1 TNFSF4 chr1 173157970 CIR1 chr2 175216380 Exonic hg19 NA BF826300 Out-of-frame Inter-chr q25.1 q31.1 110526 ChimerSeq ChiTaRs ChiTaRs MTX3-MTX3 MTX3 chr5 79272654 MTX3 chr5 79273008 Exonic hg19 NA CB243740 Out-of-frame Intra-chr q14.1 q14.1 110527 ChimerSeq ChiTaRs ChiTaRs HADHA-CHID1 HADHA chr2 26414098 CHID1 chr11 904706 Exonic hg19 NA AA873450 Out-of-frame Inter-chr p23.3 p15.5 110528 ChimerSeq ChiTaRs ChiTaRs BRD3-BRD3 BRD3 chr9 136898324 BRD3 chr9 136901154 Exonic hg19 NA N27250 Out-of-frame Intra-chr q34.2 Atypical:BRD Oncogene q34.2 Atypical:BRD Oncogene 110529 ChimerSeq ChiTaRs ChiTaRs CNN3-CNN3 CNN3 chr1 95373277 CNN3 chr1 95371888 Exonic hg19 NA AI247480 Out-of-frame Intra-chr p21.3 p21.3 110530 ChimerSeq ChiTaRs ChiTaRs PRRC2A-USP44 PRRC2A chr6 2936339 USP44 chr12 95921521 Exonic hg19 NA AW974550 Out-of-frame Inter-chr q22 110531 ChimerSeq ChiTaRs ChiTaRs ATP1B1-ARAP1 ATP1B1 chr1 169077171 ARAP1 chr11 72469638 Exonic hg19 NA AI902440 Out-of-frame Inter-chr q24.2 q13.4 110532 ChimerSeq ChiTaRs ChiTaRs NFU1-LYZ NFU1 chr2 69661630 LYZ chr12 69747539 Exonic hg19 NA BE720550 Out-of-frame Inter-chr p13.3 q15 110533 ChimerSeq ChiTaRs ChiTaRs PITX1-SH3BGRL3 PITX1 chr5 134367990 SH3BGRL3 chr1 26607655 Exonic hg19 NA BF912850 Out-of-frame Inter-chr q31.1 Transcription factor p36.11 110534 ChimerSeq ChiTaRs ChiTaRs ZNF398-RNF187 ZNF398 chr7 148851671 RNF187 chr1 228682146 Exonic hg19 NA AW837820 Out-of-frame Inter-chr q36.1 Transcription factor q42.13 110535 ChimerSeq ChiTaRs ChiTaRs TREX2-NRXN1 TREX2 chrX 152730496 NRXN1 chr2 51083187 Exonic hg19 NA X99270 Out-of-frame Inter-chr q28 Tumor suppressor gene p16.3 110536 ChimerSeq ChiTaRs ChiTaRs CLSTN1-SLC7A2 CLSTN1 chr1 9789921 SLC7A2 chr8 17427501 Exonic hg19 NA BP395070 Out-of-frame Inter-chr p36.22 p22 110537 ChimerSeq ChiTaRs ChiTaRs IFI6-PRSS8 IFI6 chr1 27992702 PRSS8 chr16 31144126 Exonic hg19 NA AA193290 Out-of-frame Inter-chr p35.3 p11.2 110538 ChimerSeq ChiTaRs ChiTaRs ANLN-ANLN ANLN chr7 36450219 ANLN chr7 36446065 Exonic hg19 NA CR936650 Out-of-frame Intra-chr p14.2 p14.2 110539 ChimerSeq ChiTaRs ChiTaRs TNFSF4-BBX TNFSF4 chr1 173464327 BBX chr3 107441738 Exonic hg19 NA BF091680 Out-of-frame Inter-chr q25.1 q13.12 Transcription factor 110540 ChimerSeq ChiTaRs ChiTaRs LAPTM4A-BAZ2B LAPTM4A chr2 20237347 BAZ2B chr2 160230499 Exonic hg19 NA AW377490 Out-of-frame Intra-chr p24.1 q24.2 Transcription factor 110541 ChimerSeq ChiTaRs ChiTaRs TMEM57-FAM122B TMEM57 chr1 25826238 FAM122B chrX 133903596 Exonic hg19 NA AK026660 Out-of-frame Inter-chr p36.11 q26.3 110542 ChimerSeq ChiTaRs ChiTaRs CLTB-PSMF1 CLTB chr5 175843360 PSMF1 chr20 1115795 Exonic hg19 NA AW170550 Out-of-frame Inter-chr q35.2 p13 110543 ChimerSeq ChiTaRs ChiTaRs CTDSP1-CTDSP1 CTDSP1 chr2 219270542 CTDSP1 chr2 219269369 Exonic hg19 NA DR156860 Out-of-frame Intra-chr q35 q35 110544 ChimerSeq ChiTaRs ChiTaRs SGCD-ZNF273 SGCD chr5 156061987 ZNF273 chr7 64355120 Exonic hg19 NA AI033540 Out-of-frame Inter-chr q33.2 q11.21 Transcription factor 110545 ChimerSeq ChiTaRs ChiTaRs RPS27-RPS24 RPS27 chr1 153964629 RPS24 chr10 79793623 Exonic hg19 NA M31520 Out-of-frame Inter-chr q21.3 q22.3 110546 ChimerSeq ChiTaRs ChiTaRs GOLGA2-RPS8 GOLGA2 chr9 131029481 RPS8 chr1 45243738 Exonic hg19 NA AK129640 Out-of-frame Inter-chr q34.11 p34.1 110547 ChimerSeq ChiTaRs ChiTaRs PDHB-RUFY3 PDHB chr3 58415954 RUFY3 chr4 71671497 Exonic hg19 NA BF747570 Out-of-frame Inter-chr p14.3 q13.3 110548 ChimerSeq ChiTaRs ChiTaRs LRBA-HTR1E LRBA chr4 151186049 HTR1E chr6 87656965 Exonic hg19 NA BI042740 Out-of-frame Inter-chr q31.3 q14.3 110549 ChimerSeq ChiTaRs ChiTaRs UROD-MCM3AP-AS1 UROD chr1 45480509 MCM3AP-AS1 chr21 47654247 Exonic hg19 NA AW385230 Out-of-frame Inter-chr p34.1 q22.3 110550 ChimerSeq ChiTaRs ChiTaRs TIPRL-CCL22 TIPRL chr1 168154118 CCL22 chr16 57397737 Exonic hg19 NA BE158320 Out-of-frame Inter-chr q24.2 q21 110551 ChimerSeq ChiTaRs ChiTaRs EXOSC10-IDO1 EXOSC10 chr1 11134373 IDO1 chr8 39785479 Exonic hg19 NA BF871880 Out-of-frame Inter-chr p36.22 p11.21 110552 ChimerSeq ChiTaRs ChiTaRs SUV39H2-SUV39H2 SUV39H2 chr10 14939383 SUV39H2 chr10 14939361 Exonic hg19 NA BG389700 Out-of-frame Intra-chr p13 p13 110553 ChimerSeq ChiTaRs ChiTaRs DUSP11-DUSP11 DUSP11 chr2 74007198 DUSP11 chr2 73994003 Exonic hg19 NA CB132390 Out-of-frame Intra-chr p13.1 p13.1 110554 ChimerSeq ChiTaRs ChiTaRs C10orf68-TAOK1 C10orf68 chr10 32871776 TAOK1 chr17 27875315 Exonic hg19 NA AV707610 Out-of-frame Inter-chr q11.2 110555 ChimerSeq ChiTaRs ChiTaRs NLGN1-KCNC3 NLGN1 chr3 173775154 KCNC3 chr19 50816566 Exonic hg19 NA CB152030 Out-of-frame Inter-chr q26.31 q13.33 110556 ChimerSeq ChiTaRs ChiTaRs GPR156-GPR156 GPR156 chr3 119900210 GPR156 chr3 119912245 Exonic hg19 NA CD638220 Out-of-frame Intra-chr q13.33 q13.33 110557 ChimerSeq ChiTaRs ChiTaRs PCOLCE-PCOLCE PCOLCE chr7 100205430 PCOLCE chr7 100205704 Exonic hg19 NA AA226580 Out-of-frame Intra-chr q22.1 q22.1 110558 ChimerSeq ChiTaRs ChiTaRs SEC23IP-TESK2 SEC23IP chr10 121700571 TESK2 chr1 45835963 Exonic hg19 NA AW387330 Out-of-frame Inter-chr q26.11 p34.1 TKL:LISK 110559 ChimerSeq ChiTaRs ChiTaRs MR1-NCKAP5 MR1 chr1 181025689 NCKAP5 chr2 133734659 Exonic hg19 NA AI335100 Out-of-frame Inter-chr q25.3 q21.2 110560 ChimerSeq ChiTaRs ChiTaRs FAM208A-FAM208A FAM208A chr3 56675773 FAM208A chr3 56675534 Exonic hg19 NA W26370 Out-of-frame Intra-chr p14.3 p14.3 110561 ChimerSeq ChiTaRs ChiTaRs GC-GC GC chr4 72611923 GC chr4 72622540 Exonic hg19 NA AI174810 Out-of-frame Intra-chr q13.3 q13.3 110562 ChimerSeq ChiTaRs ChiTaRs VIL1-VIL1 VIL1 chr2 219305519 VIL1 chr2 219305552 Exonic hg19 NA BE513010 Out-of-frame Intra-chr q35 Tumor suppressor gene q35 Tumor suppressor gene 110563 ChimerSeq ChiTaRs ChiTaRs TARDBP-XRN2 TARDBP chr1 11082553 XRN2 chr20 21314397 Exonic hg19 NA BF356570 Out-of-frame Inter-chr p36.22 p11.22 110564 ChimerSeq ChiTaRs ChiTaRs FRMD4B-SLC22A17 FRMD4B chr3 69591690 SLC22A17 chr14 23816786 Exonic hg19 NA AI951900 Out-of-frame Inter-chr p14.1 q11.2 110565 ChimerSeq ChiTaRs ChiTaRs WAC-NRP1 WAC chr10 28880511 NRP1 chr10 33536525 Exonic hg19 NA AW373550 Out-of-frame Intra-chr p12.1 p11.22 110566 ChimerSeq ChiTaRs ChiTaRs DDX50-HNRNPH3 DDX50 chr10 70661227 HNRNPH3 chr10 70100929 Exonic hg19 NA AK093710 Out-of-frame Intra-chr q22.1 q21.3 110567 ChimerSeq ChiTaRs ChiTaRs GNB1-DAD1 GNB1 chr1 1717154 DAD1 chr14 23044093 Exonic hg19 NA BE537940 Out-of-frame Inter-chr p36.33 q11.2 110568 ChimerSeq ChiTaRs ChiTaRs ALDH1A1-ALDH1A1 ALDH1A1 chr9 75515804 ALDH1A1 chr9 75515589 Exonic hg19 NA AA515000 Out-of-frame Intra-chr q21.13 q21.13 110569 ChimerSeq ChiTaRs ChiTaRs EIF3M-EIF3M EIF3M chr11 32615497 EIF3M chr11 32616460 Exonic hg19 NA BQ428530 Out-of-frame Intra-chr p13 p13 110570 ChimerSeq ChiTaRs ChiTaRs HIAT1-CNTNAP2 HIAT1 chr1 100524251 CNTNAP2 chr7 145927111 Exonic hg19 NA M86080 Out-of-frame Inter-chr Tumor suppressor gene 110571 ChimerSeq ChiTaRs ChiTaRs DGKZ-RAB6B DGKZ chr11 46402104 RAB6B chr3 133545158 Exonic hg19 NA AI638821 3'UTR-3'UTR Inter-chr p11.2 q22.1 110572 ChimerSeq ChiTaRs ChiTaRs ACOX3-C1orf106 ACOX3 chr4 8369498 C1orf106 chr1 200875031 Exonic hg19 NA AA527241 Out-of-frame Inter-chr p16.1 q32.1 110573 ChimerSeq ChiTaRs ChiTaRs ELMO1-RRM2B ELMO1 chr7 36895295 RRM2B chr8 103222283 Exonic hg19 NA BG999871 Out-of-frame Inter-chr p14.1 q22.3 110574 ChimerSeq ChiTaRs ChiTaRs HK1-HK1 HK1 chr10 71154745 HK1 chr10 71161134 Exonic hg19 NA AW903811 Out-of-frame Intra-chr q22.1 q22.1 110575 ChimerSeq ChiTaRs ChiTaRs NR3C1-NR3C1 NR3C1 chr5 142660789 NR3C1 chr5 142660178 Exonic hg19 NA CB219071 Out-of-frame Intra-chr q31.3 Transcription factor q31.3 Transcription factor 110576 ChimerSeq ChiTaRs ChiTaRs TXLNG-GMPR TXLNG chrX 16820486 GMPR chr6 16294671 Exonic hg19 NA CV340881 Out-of-frame Inter-chr p22.2 p22.3 110577 ChimerSeq ChiTaRs ChiTaRs NCAPG-NCAPG NCAPG chr4 17844002 NCAPG chr4 17841698 Exonic hg19 NA AW794691 Out-of-frame Intra-chr p15.31 p15.31 110578 ChimerSeq ChiTaRs ChiTaRs SLC36A1-FAM65B SLC36A1 chr5 150830602 FAM65B chr6 24832594 Exonic hg19 NA DA171741 Out-of-frame Inter-chr q33.1 110579 ChimerSeq ChiTaRs ChiTaRs SMO-SMO SMO chr7 128846407 SMO chr7 128848619 Exonic hg19 NA BE250601 Out-of-frame Intra-chr q32.1 Oncogene q32.1 Oncogene 110580 ChimerSeq ChiTaRs ChiTaRs DOCK4-KIAA0226 DOCK4 chr7 111808599 KIAA0226 chr3 197417335 Exonic hg19 NA BG952481 Out-of-frame Inter-chr q31.1 110581 ChimerSeq ChiTaRs ChiTaRs ACTR3-ALB ACTR3 chr2 114677671 ALB chr4 74270078 Exonic hg19 NA AI174891 Out-of-frame Inter-chr q14.1 q13.3 110582 ChimerSeq ChiTaRs ChiTaRs BRD8-RBFOX1 BRD8 chr5 137506762 RBFOX1 chr16 6476390 Exonic hg19 NA BQ323351 Out-of-frame Inter-chr q31.2 p13.3 110583 ChimerSeq ChiTaRs ChiTaRs USP19-SPOCD1 USP19 chr3 49151476 SPOCD1 chr1 32258998 Exonic hg19 NA BQ332901 Out-of-frame Inter-chr p21.31 p35.2 110584 ChimerSeq ChiTaRs ChiTaRs PAQR6-PAQR6 PAQR6 chr1 156215238 PAQR6 chr1 156214947 Exonic hg19 NA BF933691 Out-of-frame Intra-chr q22 q22 110585 ChimerSeq ChiTaRs ChiTaRs CHM-CHM CHM chrX 85116796 CHM chrX 85116698 Exonic hg19 NA BE814491 Out-of-frame Intra-chr q21.2 q21.2 110586 ChimerSeq ChiTaRs ChiTaRs ARHGAP21-C15orf38-AP3S2 ARHGAP21 chr10 24919867 C15orf38-AP3S2 chr15 90440031 Exonic hg19 NA BG656161 Out-of-frame Inter-chr p12.1 q26.1 110587 ChimerSeq ChiTaRs ChiTaRs KISS1-PSEN1 KISS1 chr1 204165049 PSEN1 chr14 73603258 Exonic hg19 NA BI053531 Out-of-frame Inter-chr q32.1 Tumor suppressor gene q24.2 110588 ChimerSeq ChiTaRs ChiTaRs COPB1-COPB1 COPB1 chr11 14482807 COPB1 chr11 14498102 Exonic hg19 NA BX484531 Out-of-frame Intra-chr p15.2 p15.2 110589 ChimerSeq ChiTaRs ChiTaRs ECHDC1-ECHDC1 ECHDC1 chr6 127610430 ECHDC1 chr6 127610432 Exonic hg19 NA BE768171 Out-of-frame Intra-chr q22.33 q22.33 110590 ChimerSeq ChiTaRs ChiTaRs NUDT13-NUDT13 NUDT13 chr10 74870787 NUDT13 chr10 74870264 Exonic hg19 NA AW294951 Out-of-frame Intra-chr q22.2 q22.2 110591 ChimerSeq ChiTaRs ChiTaRs TPM3-SEC24D TPM3 chr1 154158880 SEC24D chr4 119644073 Exonic hg19 NA BE695881 Out-of-frame Inter-chr q21.3 q26 110592 ChimerSeq ChiTaRs ChiTaRs HJURP-HJURP HJURP chr2 234760491 HJURP chr2 234761033 Exonic hg19 NA DW408391 Out-of-frame Intra-chr q37.1 q37.1 110593 ChimerSeq ChiTaRs ChiTaRs RPL14-MED12 RPL14 chr3 40503641 MED12 chrX 70361761 Exonic hg19 NA BG519661 Out-of-frame Inter-chr p22.1 q13.1 Oncogene 110594 ChimerSeq ChiTaRs ChiTaRs GOT1-FABP1 GOT1 chr10 101190377 FABP1 chr2 88424050 Exonic hg19 NA AI114691 Out-of-frame Inter-chr q24.2 p11.2 110595 ChimerSeq ChiTaRs ChiTaRs NFIA-NFIA NFIA chr1 61872399 NFIA chr1 61872298 Exonic hg19 NA BE766501 Out-of-frame Intra-chr p31.3 Transcription factor p31.3 Transcription factor 110596 ChimerSeq ChiTaRs ChiTaRs HDAC2-MATN2 HDAC2 chr6 114269128 MATN2 chr8 98898618 Exonic hg19 NA BE150381 Out-of-frame Inter-chr q21 q22.1 110597 ChimerSeq ChiTaRs ChiTaRs MAP3K13-MALAT1 MAP3K13 chr3 185083448 MALAT1 chr11 65267883 Exonic hg19 NA AA778231 Out-of-frame Inter-chr q27.2 q13.1 110598 ChimerSeq ChiTaRs ChiTaRs SRSF11-SRSF11 SRSF11 chr1 70691226 SRSF11 chr1 70691221 Exonic hg19 NA AA828061 Out-of-frame Intra-chr p31.1 p31.1 110599 ChimerSeq ChiTaRs ChiTaRs SLC12A8-CALCOCO2 SLC12A8 chr3 124811629 CALCOCO2 chr17 46940794 Exonic hg19 NA BP429101 Out-of-frame Inter-chr q21.2 q21.32 110600 ChimerSeq ChiTaRs ChiTaRs MAP2-ATP1A1 MAP2 chr2 210574696 ATP1A1 chr1 116941647 Exonic hg19 NA BE167361 Out-of-frame Inter-chr q34 p13.1 110601 ChimerSeq ChiTaRs ChiTaRs ZHX2-ZHX2 ZHX2 chr8 123900259 ZHX2 chr8 123896758 Exonic hg19 NA AK130891 Out-of-frame Intra-chr q24.13 Tumor suppressor gene Transcription factor q24.13 Tumor suppressor gene Transcription factor 110602 ChimerSeq ChiTaRs ChiTaRs HLA-DQA1-GATC HLA-DQA1 chr6 32611038 GATC chr12 120900566 Exonic hg19 NA AA173991 Out-of-frame Inter-chr q24.31 110603 ChimerSeq ChiTaRs ChiTaRs GATAD2B-GATAD2B GATAD2B chr1 153779245 GATAD2B chr1 153777758 Exonic hg19 NA AW073861 Out-of-frame Intra-chr Transcription factor Transcription factor 110604 ChimerSeq ChiTaRs ChiTaRs HEG1-AKAP8L HEG1 chr3 124732626 AKAP8L chr19 15507977 Exonic hg19 NA BF993001 Out-of-frame Inter-chr q21.2 p13.12 Transcription factor 110605 ChimerSeq ChiTaRs ChiTaRs IL1A-IL1A IL1A chr2 113535795 IL1A chr2 113535826 Exonic hg19 NA BQ353251 Out-of-frame Intra-chr q14.1 q14.1 110606 ChimerSeq ChiTaRs ChiTaRs TCOF1-ARMCX4 TCOF1 chr5 149779855 ARMCX4 chrX 100744534 Exonic hg19 NA CN479461 Out-of-frame Inter-chr q32 q22.1 110607 ChimerSeq ChiTaRs ChiTaRs TSPAN13-RNF130 TSPAN13 chr7 16824050 RNF130 chr5 179382632 Exonic hg19 NA AW843101 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q35.3 110608 ChimerSeq ChiTaRs ChiTaRs SAA1-CRIP2 SAA1 chr11 18291465 CRIP2 chr14 105946164 Exonic hg19 NA BP384371 Out-of-frame Inter-chr p15.1 Tumor suppressor gene q32.33 110609 ChimerSeq ChiTaRs ChiTaRs HNRNPA2B1-PPP4R2 HNRNPA2B1 chr7 26240366 PPP4R2 chr3 73112195 Exonic hg19 NA AV713871 Out-of-frame Inter-chr p15.2 p13 110610 ChimerSeq ChiTaRs ChiTaRs GPX3-GPX3 GPX3 chr5 150407832 GPX3 chr5 150406467 Exonic hg19 NA BG430541 Out-of-frame Intra-chr q33.1 Tumor suppressor gene q33.1 Tumor suppressor gene 110611 ChimerSeq ChiTaRs ChiTaRs LRRC2-LRRC2 LRRC2 chr3 46569698 LRRC2 chr3 46571412 Exonic hg19 NA CA773411 Out-of-frame Intra-chr p21.31 p21.31 110612 ChimerSeq ChiTaRs ChiTaRs TMEM56-RWDD3-OFD1 TMEM56-RWDD3 chr1 95698317 OFD1 chrX 13781873 Exonic hg19 NA AI908201 Out-of-frame Inter-chr p21.3 p22.2 110613 ChimerSeq ChiTaRs ChiTaRs UBA6-UBA6 UBA6 chr4 68483228 UBA6 chr4 68483200 Exonic hg19 NA AA376811 Out-of-frame Intra-chr q13.2 q13.2 110614 ChimerSeq ChiTaRs ChiTaRs FAIM-SLAIN1 FAIM chr3 138352183 SLAIN1 chr13 78317158 Exonic hg19 NA W07321 Out-of-frame Inter-chr q22.3 q22.3 110615 ChimerSeq ChiTaRs ChiTaRs RTKN-COX6B1 RTKN chr2 74654564 COX6B1 chr19 36149615 Exonic hg19 NA AA478511 Out-of-frame Inter-chr p13.1 q13.12 110616 ChimerSeq ChiTaRs ChiTaRs GNAI2-PSAP GNAI2 chr3 50296003 PSAP chr10 73579624 Exonic hg19 NA BE707091 Out-of-frame Inter-chr p21.31 q22.1 110617 ChimerSeq ChiTaRs ChiTaRs PARD3-CLDN1 PARD3 chr10 35084275 CLDN1 chr3 190025441 Exonic hg19 NA R27501 Out-of-frame Inter-chr p11.21 q28 Tumor suppressor gene 110618 ChimerSeq ChiTaRs ChiTaRs WHSC1-PRKCZ WHSC1 chr4 1979531 PRKCZ chr1 2116052 Exonic hg19 NA CF529961 Out-of-frame Inter-chr Oncogene p36.33 110619 ChimerSeq ChiTaRs ChiTaRs ARMC8-ARMC8 ARMC8 chr3 137954124 ARMC8 chr3 137953624 Exonic hg19 NA CD644321 Out-of-frame Intra-chr q22.3 q22.3 110620 ChimerSeq ChiTaRs ChiTaRs CD180-CCDC149 CD180 chr5 66478393 CCDC149 chr4 24903025 Exonic hg19 NA AI270381 Out-of-frame Inter-chr q12.3 p15.2 110621 ChimerSeq ChiTaRs ChiTaRs ZNF445-ANAPC16 ZNF445 chr3 44485863 ANAPC16 chr10 73772563 Exonic hg19 NA BI037431 Out-of-frame Inter-chr Transcription factor q22.1 110622 ChimerSeq ChiTaRs ChiTaRs AFF1-PAIP2 AFF1 chr4 88056966 PAIP2 chr5 138704720 Exonic hg19 NA R34011 Out-of-frame Inter-chr q21.3 Oncogene q31.2 Tumor suppressor gene 110623 ChimerSeq ChiTaRs ChiTaRs SNTN-SNTN SNTN chr3 63650053 SNTN chr3 63649623 Exonic hg19 NA CB852381 Out-of-frame Intra-chr p14.2 p14.2 110624 ChimerSeq ChiTaRs ChiTaRs AIF1-LEO1 AIF1 chr6 2915423 LEO1 chr15 52230523 Exonic hg19 NA BE843191 Out-of-frame Inter-chr Tumor suppressor gene q21.2 110625 ChimerSeq ChiTaRs ChiTaRs RAPGEF6-GALC RAPGEF6 chr5 130928129 GALC chr14 88458648 Exonic hg19 NA U77631 Out-of-frame Inter-chr q31.1 q31.3 110626 ChimerSeq ChiTaRs ChiTaRs IFIH1-IFIH1 IFIH1 chr2 163174693 IFIH1 chr2 163174681 Exonic hg19 NA AI906351 Out-of-frame Intra-chr q24.2 q24.2 110627 ChimerSeq ChiTaRs ChiTaRs FAM49B-FAM49B FAM49B chr8 130853863 FAM49B chr8 130853857 Exonic hg19 NA AW969701 Out-of-frame Intra-chr q24.21 q24.21 110628 ChimerSeq ChiTaRs ChiTaRs MLLT10-CYTH1 MLLT10 chr10 21983487 CYTH1 chr17 76705733 Exonic hg19 NA AW381251 Out-of-frame Inter-chr p12.31 Oncogene q25.3 110629 ChimerSeq ChiTaRs ChiTaRs LYPLA1-PFKP LYPLA1 chr8 55014552 PFKP chr10 3154477 Exonic hg19 NA DB459081 Out-of-frame Inter-chr q11.23 p15.2 110630 ChimerSeq ChiTaRs ChiTaRs SH3TC2-SH3TC2 SH3TC2 chr5 148250111 SH3TC2 chr5 148248823 Exonic hg19 NA AV726151 Out-of-frame Intra-chr q32 q32 110631 ChimerSeq ChiTaRs ChiTaRs SMU1-DNAJC9 SMU1 chr9 33076611 DNAJC9 chr10 75007154 Exonic hg19 NA AA476801 Out-of-frame Inter-chr p21.1 q22.2 110632 ChimerSeq ChiTaRs ChiTaRs NUP160-RPS6 NUP160 chr11 47800689 RPS6 chr9 19378461 Exonic hg19 NA BG874971 Out-of-frame Inter-chr p11.2 p22.1 110633 ChimerSeq ChiTaRs ChiTaRs GRINA-SNX14 GRINA chr8 145067583 SNX14 chr6 86259442 Exonic hg19 NA BM545961 3'UTR-CDS Inter-chr q24.3 q14.3 110634 ChimerSeq ChiTaRs ChiTaRs KDM5C-PTPMT1 KDM5C chrX 53221566 PTPMT1 chr11 47593062 Exonic hg19 NA AA434511 Out-of-frame Inter-chr p11.22 Oncogene p11.2 110635 ChimerSeq ChiTaRs ChiTaRs CCDC152-CCDC152 CCDC152 chr5 42800510 CCDC152 chr5 42800502 Exonic hg19 NA AA526801 Out-of-frame Intra-chr p12 p12 110636 ChimerSeq ChiTaRs ChiTaRs ZNF512-GPN1 ZNF512 chr2 27858101 GPN1 chr2 27861795 Exonic hg19 NA BE932181 Out-of-frame Intra-chr p23.3 Transcription factor p23.3 110637 ChimerSeq ChiTaRs ChiTaRs RAD23B-MSMO1 RAD23B chr9 110093229 MSMO1 chr4 166263763 Exonic hg19 NA H25981 Out-of-frame Inter-chr q31.2 Tumor suppressor gene q32.3 110638 ChimerSeq ChiTaRs ChiTaRs ZNF503-IGLON5 ZNF503 chr10 77158319 IGLON5 chr19 51831784 Exonic hg19 NA BM711641 Out-of-frame Inter-chr q22.2 Transcription factor q13.41 110639 ChimerSeq ChiTaRs ChiTaRs GNL3-GNL3 GNL3 chr3 52726970 GNL3 chr3 52726954 Exonic hg19 NA BQ929481 Out-of-frame Intra-chr p21.1 p21.1 110640 ChimerSeq ChiTaRs ChiTaRs CENPP-ZNF385B CENPP chr9 95375698 ZNF385B chr2 180609424 Exonic hg19 NA AW082201 Out-of-frame Inter-chr q22.31 q31.3 Transcription factor 110641 ChimerSeq ChiTaRs ChiTaRs SHROOM3-SHROOM3 SHROOM3 chr4 77610839 SHROOM3 chr4 77700100 Exonic hg19 NA BF001551 Out-of-frame Intra-chr q21.1 q21.1 110642 ChimerSeq ChiTaRs ChiTaRs LRPPRC-ARL15 LRPPRC chr2 44117101 ARL15 chr5 53301202 Exonic hg19 NA BE706701 Out-of-frame Inter-chr p21 q11.2 110643 ChimerSeq ChiTaRs ChiTaRs GNB1-CPLX1 GNB1 chr1 1717033 CPLX1 chr4 784965 Exonic hg19 NA CA434461 Out-of-frame Inter-chr p36.33 p16.3 110644 ChimerSeq ChiTaRs ChiTaRs CNPY3-CNPY3 CNPY3 chr6 42897387 CNPY3 chr6 42897414 Exonic hg19 NA BG818861 Out-of-frame Intra-chr p21.1 p21.1 110645 ChimerSeq ChiTaRs ChiTaRs ERLIN1-ERLIN1 ERLIN1 chr10 101910928 ERLIN1 chr10 101910381 Exonic hg19 NA BY796221 Out-of-frame Intra-chr q24.31 q24.31 110646 ChimerSeq ChiTaRs ChiTaRs CFB-PARN CFB chr6 3252074 PARN chr16 14565308 Exonic hg19 NA AI207461 Out-of-frame Inter-chr 110647 ChimerSeq ChiTaRs ChiTaRs SMARCA1-SMARCA1 SMARCA1 chrX 128599622 SMARCA1 chrX 128582301 Exonic hg19 NA CK430391 Out-of-frame Intra-chr q26.1 q26.1 110648 ChimerSeq ChiTaRs ChiTaRs IKZF1-POLR2A IKZF1 chr7 50424953 POLR2A chr17 7404378 Exonic hg19 NA BI061851 Out-of-frame Inter-chr p12.2 Oncogene Tumor suppressor gene Transcription factor p13.1 110649 ChimerSeq ChiTaRs ChiTaRs LOC389831-ATP2B4 LOC389831 chr7 86696 ATP2B4 chr1 203710482 Exonic hg19 NA DB134751 Out-of-frame Inter-chr q32.1 110650 ChimerSeq ChiTaRs ChiTaRs HUWE1-HUWE1 HUWE1 chrX 53631359 HUWE1 chrX 53630604 Exonic hg19 NA AW841891 Out-of-frame Intra-chr p11.22 p11.22 110651 ChimerSeq ChiTaRs ChiTaRs ARL15-PPP2R2A ARL15 chr5 53347054 PPP2R2A chr8 25285773 Exonic hg19 NA AF130091 Out-of-frame Inter-chr q11.2 p21.2 110652 ChimerSeq ChiTaRs ChiTaRs MIR3134-MIR3134 MIR3134 chr9 114982812 MIR3134 chr9 114982418 Exonic hg19 NA CN278541 Out-of-frame Intra-chr p25.1 p25.1 110653 ChimerSeq ChiTaRs ChiTaRs COL1A2-PARVA COL1A2 chr7 94060018 PARVA chr11 12552969 Exonic hg19 NA N70631 Out-of-frame Inter-chr q21.3 p15.3 110654 ChimerSeq ChiTaRs ChiTaRs ZNF706-ZNF706 ZNF706 chr8 102217150 ZNF706 chr8 102217189 Exonic hg19 NA BE155371 Out-of-frame Intra-chr q22.3 Transcription factor q22.3 Transcription factor 110655 ChimerSeq ChiTaRs ChiTaRs PTPN12-ATXN1 PTPN12 chr7 77267995 ATXN1 chr6 16331019 Exonic hg19 NA BF852951 Out-of-frame Inter-chr q11.23 Tumor suppressor gene p22.3 110656 ChimerSeq ChiTaRs ChiTaRs SSFA2-SSFA2 SSFA2 chr2 182766664 SSFA2 chr2 182766591 Exonic hg19 NA AW842451 Out-of-frame Intra-chr q31.3 q31.3 110657 ChimerSeq ChiTaRs ChiTaRs NOLC1-ARL15 NOLC1 chr10 103916985 ARL15 chr5 53482872 Exonic hg19 NA BP225181 Out-of-frame Inter-chr q24.32 q11.2 110658 ChimerSeq ChiTaRs ChiTaRs UBA7-UBA7 UBA7 chr3 49846590 UBA7 chr3 49850690 Exonic hg19 NA BE762551 Out-of-frame Intra-chr p21.31 p21.31 110659 ChimerSeq ChiTaRs ChiTaRs ANKS1A-KIAA1217 ANKS1A chr6 35000983 KIAA1217 chr10 24756326 Exonic hg19 NA BF755121 Out-of-frame Inter-chr p21.31 p12.2 110660 ChimerSeq ChiTaRs ChiTaRs FKBP5-FNDC3B FKBP5 chr6 35639197 FNDC3B chr3 172106338 Exonic hg19 NA BG002941 Out-of-frame Inter-chr p21.31 q26.31 110661 ChimerSeq ChiTaRs ChiTaRs TPO-RAB11FIP3 TPO chr2 1546295 RAB11FIP3 chr16 546060 Exonic hg19 NA BI004881 Out-of-frame Inter-chr 110662 ChimerSeq ChiTaRs ChiTaRs RREB1-RREB1 RREB1 chr6 7246727 RREB1 chr6 7246840 Exonic hg19 NA BF845881 Out-of-frame Intra-chr p24.3 Transcription factor p24.3 Transcription factor 110663 ChimerSeq ChiTaRs ChiTaRs ANO9-ANO9 ANO9 chr11 418386 ANO9 chr11 418413 Exonic hg19 NA CN361291 Out-of-frame Intra-chr p15.5 p15.5 110664 ChimerSeq ChiTaRs ChiTaRs LEKR1-BMP2K LEKR1 chr3 156678079 BMP2K chr4 79828405 Exonic hg19 NA AW836821 Out-of-frame Inter-chr q25.31 q21.21 110665 ChimerSeq ChiTaRs ChiTaRs NCOA2-SLC7A1 NCOA2 chr8 71261525 SLC7A1 chr13 30083551 Exonic hg19 NA BG260721 Out-of-frame Inter-chr q13.3 Oncogene Transcription factor q12.3 110666 ChimerSeq ChiTaRs ChiTaRs RNF149-RNF149 RNF149 chr2 101903342 RNF149 chr2 101903384 Exonic hg19 NA DN916171 Out-of-frame Intra-chr q11.2 q11.2 110667 ChimerSeq ChiTaRs ChiTaRs PTMA-PTMA PTMA chr2 232577616 PTMA chr2 232577561 Exonic hg19 NA BQ322331 Out-of-frame Intra-chr q37.1 q37.1 110668 ChimerSeq ChiTaRs ChiTaRs CNTRL-MALAT1 CNTRL chr9 123904388 MALAT1 chr11 65266516 Exonic hg19 NA DW435781 Out-of-frame Inter-chr q33.2 q13.1 110669 ChimerSeq ChiTaRs ChiTaRs HDAC3-NSL1 HDAC3 chr5 141005639 NSL1 chr1 212923249 Exonic hg19 NA BF871741 Out-of-frame Inter-chr q31.3 Tumor suppressor gene q32.3 110670 ChimerSeq ChiTaRs ChiTaRs BCLAF1-BCLAF1 BCLAF1 chr6 136580812 BCLAF1 chr6 136579776 Exonic hg19 NA BI090711 Out-of-frame Intra-chr q23.3 q23.3 110671 ChimerSeq ChiTaRs ChiTaRs TRAK1-ALDOC TRAK1 chr3 42245761 ALDOC chr17 26900278 Exonic hg19 NA BE070871 Out-of-frame Inter-chr p22.1 q11.2 110672 ChimerSeq ChiTaRs ChiTaRs CREB5-CD74 CREB5 chr7 28849918 CD74 chr5 149792223 Exonic hg19 NA DA981541 Out-of-frame Inter-chr p15.1 Transcription factor q33.1 110673 ChimerSeq ChiTaRs ChiTaRs NID1-NID1 NID1 chr1 236143247 NID1 chr1 236154185 Exonic hg19 NA AL710721 Out-of-frame Intra-chr q42.3 q42.3 110674 ChimerSeq ChiTaRs ChiTaRs LOC100124692-LOC100124692 LOC100124692 chr7 141921017 LOC100124692 chr7 141921002 Exonic hg19 NA AW816111 Out-of-frame Intra-chr 110675 ChimerSeq ChiTaRs ChiTaRs CMBL-DCAF8 CMBL chr5 10279705 DCAF8 chr1 160227509 Exonic hg19 NA AA421821 Out-of-frame Inter-chr p15.2 q23.2 110676 ChimerSeq ChiTaRs ChiTaRs ARID1B-ARID1B ARID1B chr6 157431698 ARID1B chr6 157431604 Exonic hg19 NA BI000771 Out-of-frame Intra-chr q25.3 Oncogene q25.3 Oncogene 110677 ChimerSeq ChiTaRs ChiTaRs GNPDA1-GNPDA1 GNPDA1 chr5 141382699 GNPDA1 chr5 141381388 Exonic hg19 NA BU619601 Out-of-frame Intra-chr q31.3 q31.3 110678 ChimerSeq ChiTaRs ChiTaRs RHOBTB3-RHOBTB3 RHOBTB3 chr5 95091233 RHOBTB3 chr5 95091201 Exonic hg19 NA BF986091 Out-of-frame Intra-chr q15 q15 110679 ChimerSeq ChiTaRs ChiTaRs MAGI1-FOXO1 MAGI1 chr3 65395363 FOXO1 chr13 41170096 Exonic hg19 NA AK022351 Out-of-frame Inter-chr Oncogene q14.11 Oncogene Tumor suppressor gene Transcription factor 110680 ChimerSeq ChiTaRs ChiTaRs H6PD-EPHB2 H6PD chr1 9322641 EPHB2 chr1 23060274 Exonic hg19 NA BF738621 Out-of-frame Intra-chr p36.22 p36.12 Tumor suppressor gene 110681 ChimerSeq ChiTaRs ChiTaRs ARPC4-TTLL3-GRIA2 ARPC4-TTLL3 chr3 9870721 GRIA2 chr4 158231484 Exonic hg19 NA BE837601 Out-of-frame Inter-chr p25.3 q32.1 110682 ChimerSeq ChiTaRs ChiTaRs PHF7-PHF7 PHF7 chr3 52457299 PHF7 chr3 52456731 Exonic hg19 NA AL137671 Out-of-frame Intra-chr p21.1 p21.1 110683 ChimerSeq ChiTaRs ChiTaRs UBE2H-PON1 UBE2H chr7 129503432 PON1 chr7 94929189 Exonic hg19 NA BX485261 Out-of-frame Intra-chr q32.2 q21.3 110684 ChimerSeq ChiTaRs ChiTaRs PABPC1-NR4A1 PABPC1 chr8 101734059 NR4A1 chr12 52451247 Exonic hg19 NA BG928171 Out-of-frame Inter-chr q22.3 q13.13 Tumor suppressor gene Transcription factor 110685 ChimerSeq ChiTaRs ChiTaRs MIR3134-MIR3134 MIR3134 chr9 114981396 MIR3134 chr9 114986689 Exonic hg19 NA BE709701 Out-of-frame Intra-chr p25.1 p25.1 110686 ChimerSeq ChiTaRs ChiTaRs C1orf198-RGPD5 C1orf198 chr1 230973297 RGPD5 chr2 113128392 Exonic hg19 NA BP372051 Out-of-frame Inter-chr q42.2 q13 110687 ChimerSeq ChiTaRs ChiTaRs MRPL9-RPS6KA2 MRPL9 chr1 151732422 RPS6KA2 chr6 166824760 Exonic hg19 NA AI432441 Out-of-frame Inter-chr q21.3 q27 Oncogene Tumor suppressor gene 110688 ChimerSeq ChiTaRs ChiTaRs UBXN2B-WDR7 UBXN2B chr8 59329514 WDR7 chr18 54629652 Exonic hg19 NA DA405521 Out-of-frame Inter-chr q12.1 q21.31 110689 ChimerSeq ChiTaRs ChiTaRs CC2D1B-CC2D1B CC2D1B chr1 52823011 CC2D1B chr1 52825160 Exonic hg19 NA BF885541 Out-of-frame Intra-chr p32.3 p32.3 110690 ChimerSeq ChiTaRs ChiTaRs MIR548G-MIR548G MIR548G chr3 99567080 MIR548G chr3 99567103 Exonic hg19 NA AA568101 Out-of-frame Intra-chr q31.22 q31.22 110691 ChimerSeq ChiTaRs ChiTaRs SRP19-ATAD5 SRP19 chr5 112203210 ATAD5 chr17 29194880 Exonic hg19 NA CR736801 Out-of-frame Inter-chr q22.2 q11.2 110692 ChimerSeq ChiTaRs ChiTaRs DTX3L-DTX3L DTX3L chr3 122290022 DTX3L chr3 122289867 Exonic hg19 NA BF916921 Out-of-frame Intra-chr q21.1 q21.1 110693 ChimerSeq ChiTaRs ChiTaRs SRD5A3-SRD5A3 SRD5A3 chr4 56225650 SRD5A3 chr4 56230240 Exonic hg19 NA AI906091 Out-of-frame Intra-chr q12 q12 110694 ChimerSeq ChiTaRs ChiTaRs HBB-RNH1 HBB chr11 5248285 RNH1 chr11 494514 Exonic hg19 NA AJ710681 Out-of-frame Intra-chr p15.4 Tumor suppressor gene 110695 ChimerSeq ChiTaRs ChiTaRs PCDH7-PCDH7 PCDH7 chr4 31120165 PCDH7 chr4 31119838 Exonic hg19 NA AA730641 Out-of-frame Intra-chr p15.1 p15.1 110696 ChimerSeq ChiTaRs ChiTaRs FOXP1-FOXP1 FOXP1 chr3 71006219 FOXP1 chr3 71006334 Exonic hg19 NA CF137681 Out-of-frame Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor p13 Oncogene Tumor suppressor gene Transcription factor 110697 ChimerSeq ChiTaRs ChiTaRs C8orf12-FGD1 C8orf12 chr8 11282101 FGD1 chrX 54492591 Exonic hg19 NA AW409321 Out-of-frame Inter-chr p11.22 110698 ChimerSeq ChiTaRs ChiTaRs SNRNP200-SNRNP200 SNRNP200 chr2 96944375 SNRNP200 chr2 96943328 Exonic hg19 NA W22071 Out-of-frame Intra-chr q11.2 q11.2 110699 ChimerSeq ChiTaRs ChiTaRs MICA-ASXL2 MICA chr6 2704302 ASXL2 chr2 25978885 Exonic hg19 NA BF816101 Out-of-frame Inter-chr p21.33 p23.3 110700 ChimerSeq ChiTaRs ChiTaRs TMPRSS11B-TSN TMPRSS11B chr4 69107586 TSN chr2 122524616 Exonic hg19 NA AW969521 Out-of-frame Inter-chr q13.2 q14.3 110701 ChimerSeq ChiTaRs ChiTaRs NAB1-NAB1 NAB1 chr2 191546266 NAB1 chr2 191545799 Exonic hg19 NA BI027971 Out-of-frame Intra-chr q32.2 q32.2 110702 ChimerSeq ChiTaRs ChiTaRs COL1A2-JAM2 COL1A2 chr7 94059252 JAM2 chr21 27066170 Exonic hg19 NA BF932991 Out-of-frame Inter-chr q21.3 q21.3 110703 ChimerSeq ChiTaRs ChiTaRs ENAH-ENAH ENAH chr1 225678009 ENAH chr1 225678279 Exonic hg19 NA BM476111 Out-of-frame Intra-chr q42.12 q42.12 110704 ChimerSeq ChiTaRs ChiTaRs SND1-MYOG SND1 chr7 127569372 MYOG chr1 203054771 Exonic hg19 NA BF308961 Out-of-frame Inter-chr q32.1 q32.1 Transcription factor 110705 ChimerSeq ChiTaRs ChiTaRs TRPM3-IQGAP1 TRPM3 chr9 73442924 IQGAP1 chr15 91034620 Exonic hg19 NA BF351441 Out-of-frame Inter-chr q21.13 q26.1 110706 ChimerSeq ChiTaRs ChiTaRs FAR1-FAR1 FAR1 chr11 13694626 FAR1 chr11 13694423 Exonic hg19 NA AA862191 Out-of-frame Intra-chr p15.3 p15.3 110707 ChimerSeq ChiTaRs ChiTaRs SSBP3-EIF4EBP2 SSBP3 chr1 54692683 EIF4EBP2 chr10 72183099 Exonic hg19 NA AI738781 Out-of-frame Inter-chr p32.3 q22.1 110708 ChimerSeq ChiTaRs ChiTaRs C6orf48-TNRC18 C6orf48 chr6 3097730 TNRC18 chr7 5441188 Exonic hg19 NA BE147411 Out-of-frame Inter-chr p22.1 110709 ChimerSeq ChiTaRs ChiTaRs PRRC2C-PRRC2C PRRC2C chr1 171496978 PRRC2C chr1 171491316 Exonic hg19 NA BE156211 Out-of-frame Intra-chr q24.3 q24.3 110710 ChimerSeq ChiTaRs ChiTaRs FNBP1-FNBP1 FNBP1 chr9 132672496 FNBP1 chr9 132672172 Exonic hg19 NA BF356931 Out-of-frame Intra-chr q34.11 q34.11 110711 ChimerSeq ChiTaRs ChiTaRs KPNA6-KPNA6 KPNA6 chr1 32639886 KPNA6 chr1 32639954 Exonic hg19 NA BF996481 Out-of-frame Intra-chr p35.2 p35.2 110712 ChimerSeq ChiTaRs ChiTaRs MTA3-SEC31A MTA3 chr2 42731361 SEC31A chr4 83768137 Exonic hg19 NA CA419101 Out-of-frame Inter-chr p21 q21.22 110713 ChimerSeq ChiTaRs ChiTaRs PAPPA-PAPPA PAPPA chr9 118970317 PAPPA chr9 118970332 Exonic hg19 NA BF994661 Out-of-frame Intra-chr q33.1 q33.1 110714 ChimerSeq ChiTaRs ChiTaRs SDC1-PROS1 SDC1 chr2 20402069 PROS1 chr3 93628822 Exonic hg19 NA BE185151 Out-of-frame Inter-chr p24.1 q11.1 110715 ChimerSeq ChiTaRs ChiTaRs ZNF608-REEP3 ZNF608 chr5 123984778 REEP3 chr10 65383214 Exonic hg19 NA AA446881 Out-of-frame Inter-chr q23.2 Transcription factor q21.3 110716 ChimerSeq ChiTaRs ChiTaRs UBE2H-UBE2H UBE2H chr7 129550474 UBE2H chr7 129530536 Exonic hg19 NA BE005761 Out-of-frame Intra-chr q32.2 q32.2 110717 ChimerSeq ChiTaRs ChiTaRs ANKHD1-EIF4EBP3-SCAF8 ANKHD1-EIF4EBP3 chr5 139929158 SCAF8 chr6 155073262 Exonic hg19 NA AA911801 Out-of-frame Inter-chr q31.3 q25.2 110718 ChimerSeq ChiTaRs ChiTaRs COL1A2-COL1A2 COL1A2 chr7 94057119 COL1A2 chr7 94057060 Exonic hg19 NA AA348171 Out-of-frame Intra-chr q21.3 q21.3 110719 ChimerSeq ChiTaRs ChiTaRs BMP8A-PPIEL BMP8A chr1 39992694 PPIEL chr1 40007763 Exonic hg19 NA AW836221 Out-of-frame Intra-chr p34.3 p34.3 110720 ChimerSeq ChiTaRs ChiTaRs QRSL1-QRSL1 QRSL1 chr6 107100409 QRSL1 chr6 107100378 Exonic hg19 NA BE250091 Out-of-frame Intra-chr q21 q21 110721 ChimerSeq ChiTaRs ChiTaRs PEA15-INS-IGF2 PEA15 chr1 160182965 INS-IGF2 chr11 2150610 Exonic hg19 NA BQ366771 Out-of-frame Inter-chr q23.2 Tumor suppressor gene p15.5 110722 ChimerSeq ChiTaRs ChiTaRs LOC728012-SMEK1 LOC728012 chr6 100524291 SMEK1 chr14 91924532 Exonic hg19 NA AA906901 Out-of-frame Inter-chr 110723 ChimerSeq ChiTaRs ChiTaRs ABL2-ABL2 ABL2 chr1 179075500 ABL2 chr1 179074885 Exonic hg19 NA BG178591 Out-of-frame Intra-chr q25.2 TK:Abl Oncogene q25.2 TK:Abl Oncogene 110724 ChimerSeq ChiTaRs ChiTaRs BHMT2-SPTLC3 BHMT2 chr5 78374089 SPTLC3 chr20 13145632 Exonic hg19 NA AA703201 Out-of-frame Inter-chr q14.1 p12.1 110725 ChimerSeq ChiTaRs ChiTaRs RAD23B-LOC344887 RAD23B chr9 110079687 LOC344887 chr3 185697548 Exonic hg19 NA BI018011 Out-of-frame Inter-chr q31.2 Tumor suppressor gene 110726 ChimerSeq ChiTaRs ChiTaRs NFKB1-NFKB1 NFKB1 chr4 103538273 NFKB1 chr4 103537757 Exonic hg19 NA CA311701 Out-of-frame Intra-chr q24 Oncogene Tumor suppressor gene Transcription factor q24 Oncogene Tumor suppressor gene Transcription factor 110727 ChimerSeq ChiTaRs ChiTaRs AUTS2-ENPP2 AUTS2 chr7 69813447 ENPP2 chr8 120600141 Exonic hg19 NA AV754461 Out-of-frame Inter-chr q11.22 q24.12 110728 ChimerSeq ChiTaRs ChiTaRs C5orf28-IPO11 C5orf28 chr5 43480466 IPO11 chr5 61754084 Exonic hg19 NA AW750241 Out-of-frame Intra-chr q12.1 110729 ChimerSeq ChiTaRs ChiTaRs PLEK-PLEK PLEK chr2 68623562 PLEK chr2 68613714 Exonic hg19 NA CB046501 Out-of-frame Intra-chr p14 p14 110730 ChimerSeq ChiTaRs ChiTaRs ELMO1-ADAM12 ELMO1 chr7 37214909 ADAM12 chr10 127730730 Exonic hg19 NA BI051281 Out-of-frame Inter-chr p14.1 q26.2 110731 ChimerSeq ChiTaRs ChiTaRs CGGBP1-ACTN4 CGGBP1 chr3 88108084 ACTN4 chr19 39220788 Exonic hg19 NA BP392581 Out-of-frame Inter-chr p11.1 Transcription factor 110732 ChimerSeq ChiTaRs ChiTaRs KIF1A-KIF1A KIF1A chr2 241653909 KIF1A chr2 241656475 Exonic hg19 NA BP310651 Out-of-frame Intra-chr q37.3 q37.3 110733 ChimerSeq ChiTaRs ChiTaRs CERCAM-CERCAM CERCAM chr9 131199620 CERCAM chr9 131199458 Exonic hg19 NA CA430721 Out-of-frame Intra-chr q34.11 q34.11 110734 ChimerSeq ChiTaRs ChiTaRs FAM92A1-FAM92A1 FAM92A1 chr8 94729510 FAM92A1 chr8 94729523 Exonic hg19 NA BG996511 Out-of-frame Intra-chr 110735 ChimerSeq ChiTaRs ChiTaRs SSR3-SSR3 SSR3 chr3 156260977 SSR3 chr3 156259374 Exonic hg19 NA AW838201 Out-of-frame Intra-chr q25.31 q25.31 110736 ChimerSeq ChiTaRs ChiTaRs AKAP9-AKAP9 AKAP9 chr7 91630522 AKAP9 chr7 91622250 Exonic hg19 NA CB177531 Out-of-frame Intra-chr q21.2 Oncogene q21.2 Oncogene 110737 ChimerSeq ChiTaRs ChiTaRs HIF1AN-HIF1AN HIF1AN chr10 102309098 HIF1AN chr10 102308568 Exonic hg19 NA BE169361 Out-of-frame Intra-chr q24.31 q24.31 110738 ChimerSeq ChiTaRs ChiTaRs EXOSC2-COQ9 EXOSC2 chr9 133580139 COQ9 chr16 57490113 Exonic hg19 NA AW889761 Out-of-frame Inter-chr q34.12 q21 110739 ChimerSeq ChiTaRs ChiTaRs IPO9-IPO9 IPO9 chr1 201845897 IPO9 chr1 201845676 Exonic hg19 NA CB244001 Out-of-frame Intra-chr q32.1 q32.1 110740 ChimerSeq ChiTaRs ChiTaRs CENPF-CENPF CENPF chr1 214837428 CENPF chr1 214837338 Exonic hg19 NA AW090091 Out-of-frame Intra-chr q41 q41 110741 ChimerSeq ChiTaRs ChiTaRs PTPN3-ZBTB38 PTPN3 chr9 112201235 ZBTB38 chr3 141156199 Exonic hg19 NA BF368991 Out-of-frame Inter-chr q31.3 q23 Transcription factor 110742 ChimerSeq ChiTaRs ChiTaRs PRDM16-UMODL1 PRDM16 chr1 3063593 UMODL1 chr21 43542778 Exonic hg19 NA EL582681 Out-of-frame Inter-chr p36.32 Transcription factor q22.3 110743 ChimerSeq ChiTaRs ChiTaRs PIM1-DGCR2 PIM1 chr6 37143202 DGCR2 chr22 19034210 Exonic hg19 NA BF940951 Out-of-frame Inter-chr p21.2 CAMK:PIM Oncogene q11.21 110744 ChimerSeq ChiTaRs ChiTaRs BCYRN1-CLEC1A BCYRN1 chrX 70777454 CLEC1A chr12 10224050 Exonic hg19 NA BE169871 Out-of-frame Inter-chr p21 p13.2 110745 ChimerSeq ChiTaRs ChiTaRs ZBED5-LOC439994 ZBED5 chr11 10879612 LOC439994 chr10 89102801 Exonic hg19 NA DA493591 Out-of-frame Inter-chr p15.4 Transcription factor 110746 ChimerSeq ChiTaRs ChiTaRs ATG3-KCNIP4 ATG3 chr3 112260688 KCNIP4 chr4 21235026 Exonic hg19 NA AW386111 Out-of-frame Inter-chr q13.2 p15.2 110747 ChimerSeq ChiTaRs ChiTaRs CROCCP2-ANKDD1A CROCCP2 chr1 16955460 ANKDD1A chr15 65248007 Exonic hg19 NA BE008451 Out-of-frame Inter-chr p36.13 q22.31 110748 ChimerSeq ChiTaRs ChiTaRs DENND2C-OXNAD1 DENND2C chr1 115110615 OXNAD1 chr3 16358492 Exonic hg19 NA BF933501 Out-of-frame Inter-chr p13.2 p25.1 110749 ChimerSeq ChiTaRs ChiTaRs RGS1-RGS1 RGS1 chr1 192548616 RGS1 chr1 192548991 Exonic hg19 NA N51141 Out-of-frame Intra-chr q31.2 q31.2 110750 ChimerSeq ChiTaRs ChiTaRs C7orf10-KAT2A C7orf10 chr7 40206706 KAT2A chr17 40265329 Exonic hg19 NA AW885731 Out-of-frame Inter-chr q21.2 110751 ChimerSeq ChiTaRs ChiTaRs RNF141-RNF141 RNF141 chr11 10533839 RNF141 chr11 10533882 Exonic hg19 NA CA314811 Out-of-frame Intra-chr p15.4 p15.4 110752 ChimerSeq ChiTaRs ChiTaRs RPA2-SERPING1 RPA2 chr1 28218257 SERPING1 chr11 57369538 Exonic hg19 NA CA309301 Out-of-frame Inter-chr p35.3 q12.1 110753 ChimerSeq ChiTaRs ChiTaRs ARMC9-ARMC9 ARMC9 chr2 232209909 ARMC9 chr2 232143132 Exonic hg19 NA BF064081 Out-of-frame Intra-chr q37.1 q37.1 110754 ChimerSeq ChiTaRs ChiTaRs ATP6V0B-ATP6V0B ATP6V0B chr1 44443965 ATP6V0B chr1 44442700 Exonic hg19 NA AA420851 Out-of-frame Intra-chr p34.1 p34.1 110755 ChimerSeq ChiTaRs ChiTaRs ALB-RPS4Y1 ALB chr4 74283280 RPS4Y1 chrY 2709643 Exonic hg19 NA AF116711 Out-of-frame Inter-chr q13.3 p11.2 110756 ChimerSeq ChiTaRs ChiTaRs ST3GAL3-TMC8 ST3GAL3 chr1 44329062 TMC8 chr17 76137957 Exonic hg19 NA BF896801 Out-of-frame Inter-chr p34.1 q25.3 110757 ChimerSeq ChiTaRs ChiTaRs SST-ANKRD52 SST chr3 187386808 ANKRD52 chr12 56636333 Exonic hg19 NA DB303581 Out-of-frame Inter-chr q27.3 q13.3 110758 ChimerSeq ChiTaRs ChiTaRs PTPRN2-PTPRN2 PTPRN2 chr7 157332663 PTPRN2 chr7 157332619 Exonic hg19 NA BE696621 Out-of-frame Intra-chr q36.3 q36.3 110759 ChimerSeq ChiTaRs ChiTaRs GPR89A-SCAF8 GPR89A chr1 145914859 SCAF8 chr6 155057705 Exonic hg19 NA AW945781 Out-of-frame Inter-chr q21.1 q25.2 110760 ChimerSeq ChiTaRs ChiTaRs OFCC1-OFCC1 OFCC1 chr6 9900728 OFCC1 chr6 9845750 Exonic hg19 NA AF548121 Out-of-frame Intra-chr p24.3 p24.3 110761 ChimerSeq ChiTaRs ChiTaRs TMEM38B-SMEK2 TMEM38B chr9 108467964 SMEK2 chr2 55784202 Exonic hg19 NA BE831801 Out-of-frame Inter-chr q31.2 110762 ChimerSeq ChiTaRs ChiTaRs DOCK10-RPRD2 DOCK10 chr2 225719827 RPRD2 chr1 150376618 Exonic hg19 NA AI351191 Out-of-frame Inter-chr q36.2 q21.2 110763 ChimerSeq ChiTaRs ChiTaRs DNMBP-LURAP1L DNMBP chr10 101697607 LURAP1L chr9 12816067 Exonic hg19 NA AU120581 Out-of-frame Inter-chr q24.2 p23 110764 ChimerSeq ChiTaRs ChiTaRs TNS1-TNS1 TNS1 chr2 218666889 TNS1 chr2 218667392 Exonic hg19 NA AA496251 Out-of-frame Intra-chr q35 q35 110765 ChimerSeq ChiTaRs ChiTaRs PLCL2-SH3BGR PLCL2 chr3 17066191 SH3BGR chr21 40880928 Exonic hg19 NA BF574371 Out-of-frame Inter-chr q22.2 110766 ChimerSeq ChiTaRs ChiTaRs SEMA6A-DOCK10 SEMA6A chr5 115785889 DOCK10 chr2 225699395 Exonic hg19 NA BM974321 Out-of-frame Inter-chr q23.1 q36.2 110767 ChimerSeq ChiTaRs ChiTaRs SZT2-RRAGC SZT2 chr1 43918421 RRAGC chr1 39308554 Exonic hg19 NA BQ337511 Out-of-frame Intra-chr p34.2 p34.3 110768 ChimerSeq ChiTaRs ChiTaRs B3GALT6-B3GALT6 B3GALT6 chr1 1170352 B3GALT6 chr1 1169946 Exonic hg19 NA AI347131 Out-of-frame Intra-chr p36.33 p36.33 110769 ChimerSeq ChiTaRs ChiTaRs EIF4EBP2-GSTM1 EIF4EBP2 chr10 72183014 GSTM1 chr1 110232905 Exonic hg19 NA BE091541 Out-of-frame Inter-chr q22.1 p13.3 110770 ChimerSeq ChiTaRs ChiTaRs SQSTM1-SQSTM1 SQSTM1 chr5 179264253 SQSTM1 chr5 179264765 Exonic hg19 NA BU727331 Out-of-frame Intra-chr q35.3 q35.3 110771 ChimerSeq ChiTaRs ChiTaRs BCAR3-CTSL1 BCAR3 chr1 94245905 CTSL1 chr9 90345987 Exonic hg19 NA BG015981 Out-of-frame Inter-chr p22.1 110772 ChimerSeq ChiTaRs ChiTaRs PIGR-FAM3D PIGR chr1 207101910 FAM3D chr3 58629388 Exonic hg19 NA CD723341 3'UTR-CDS Inter-chr q32.1 p14.2 110773 ChimerSeq ChiTaRs ChiTaRs MMS19-DHX57 MMS19 chr10 99227539 DHX57 chr2 39079082 Exonic hg19 NA BF844351 Out-of-frame Inter-chr q24.1 p22.1 110774 ChimerSeq ChiTaRs ChiTaRs ANP32B-TG ANP32B chr9 100771382 TG chr8 133961126 Exonic hg19 NA AU141421 Out-of-frame Inter-chr q22.33 q24.22 110775 ChimerSeq ChiTaRs ChiTaRs GTPBP6-MIR548N GTPBP6 chrY 180887 MIR548N chr2 179506202 Exonic hg19 NA Y14391 5'UTR-5'UTR Inter-chr p22.33 p14.2 110776 ChimerSeq ChiTaRs ChiTaRs KISS1-PSEN1 KISS1 chr1 204165049 PSEN1 chr14 73614503 Exonic hg19 NA BI055891 Out-of-frame Inter-chr q32.1 Tumor suppressor gene q24.2 110777 ChimerSeq ChiTaRs ChiTaRs GANAB-STX7 GANAB chr11 62408987 STX7 chr6 132824675 Exonic hg19 NA BF085691 Out-of-frame Inter-chr q12.3 Tumor suppressor gene q23.2 110778 ChimerSeq ChiTaRs ChiTaRs BASP1-CDK1 BASP1 chr5 17276621 CDK1 chr10 62543880 Exonic hg19 NA BE695901 Out-of-frame Inter-chr p15.1 Tumor suppressor gene q21.2 110779 ChimerSeq ChiTaRs ChiTaRs NRCAM-PNPLA8 NRCAM chr7 108096829 PNPLA8 chr7 108137998 Exonic hg19 NA DB477711 Out-of-frame Intra-chr q31.1 Tumor suppressor gene q31.1 110780 ChimerSeq ChiTaRs ChiTaRs AGK-NDUFB2 AGK chr7 141255367 NDUFB2 chr7 140402665 Exonic hg19 NA CB993911 In-Frame Intra-chr q34 Seq+ 110781 ChimerSeq ChiTaRs ChiTaRs SEC62-SEC62 SEC62 chr3 169706153 SEC62 chr3 169693395 Exonic hg19 NA BC105971 Out-of-frame Intra-chr q26.2 q26.2 110782 ChimerSeq ChiTaRs ChiTaRs FAM168B-FAM168B FAM168B chr2 131805603 FAM168B chr2 131805578 Exonic hg19 NA CA311681 Out-of-frame Intra-chr q21.1 q21.1 110783 ChimerSeq ChiTaRs ChiTaRs PCMTD1-FDFT1 PCMTD1 chr8 52811558 FDFT1 chr8 11666293 Exonic hg19 NA N34721 Out-of-frame Intra-chr q11.23 p23.1 110784 ChimerSeq ChiTaRs ChiTaRs SPARCL1-SPARCL1 SPARCL1 chr4 88415325 SPARCL1 chr4 88414978 Exonic hg19 NA BE856511 Out-of-frame Intra-chr q22.1 Tumor suppressor gene q22.1 Tumor suppressor gene 110785 ChimerSeq ChiTaRs ChiTaRs RAD54B-HNRNPA2B1 RAD54B chr8 95416440 HNRNPA2B1 chr7 26232928 Exonic hg19 NA BF916091 Out-of-frame Inter-chr q22.1 p15.2 110786 ChimerSeq ChiTaRs ChiTaRs GRB14-GRB14 GRB14 chr2 165358795 GRB14 chr2 165404300 Exonic hg19 NA DA571601 Out-of-frame Intra-chr q24.3 q24.3 110787 ChimerSeq ChiTaRs ChiTaRs HPX-R3HDM1 HPX chr11 6452330 R3HDM1 chr2 136396526 Exonic hg19 NA H95581 Out-of-frame Inter-chr p15.4 q21.3 110788 ChimerSeq ChiTaRs ChiTaRs PTPRK-PTPRK PTPRK chr6 128744127 PTPRK chr6 128743994 Exonic hg19 NA AW854661 Out-of-frame Intra-chr Tumor suppressor gene Tumor suppressor gene 110789 ChimerSeq ChiTaRs ChiTaRs SERINC1-SERINC1 SERINC1 chr6 122779783 SERINC1 chr6 122766282 Exonic hg19 NA BE177841 Out-of-frame Intra-chr q22.31 q22.31 110790 ChimerSeq ChiTaRs ChiTaRs C11orf48-C11orf48 C11orf48 chr11 62432371 C11orf48 chr11 62430333 Exonic hg19 NA BE767261 Out-of-frame Intra-chr 110791 ChimerSeq ChiTaRs ChiTaRs MFAP3L-AADAT MFAP3L chr4 170947545 AADAT chr4 170994368 Exonic hg19 NA CF593501 Out-of-frame Intra-chr q33 q33 110792 ChimerSeq ChiTaRs ChiTaRs ADAM12-GPRC5C ADAM12 chr10 127824508 GPRC5C chr17 72432741 Exonic hg19 NA BF368961 Out-of-frame Inter-chr q26.2 q25.1 110793 ChimerSeq ChiTaRs ChiTaRs USP11-SIRPA USP11 chrX 47107542 SIRPA chr20 1918906 Exonic hg19 NA T74731 Out-of-frame Inter-chr p11.3 p13 110794 ChimerSeq ChiTaRs ChiTaRs MICB-SHANK3 MICB chr6 2618147 SHANK3 chr22 51161811 Exonic hg19 NA BG983591 Out-of-frame Inter-chr 110795 ChimerSeq ChiTaRs ChiTaRs TMEM138-CBX5 TMEM138 chr11 61136159 CBX5 chr12 54633912 Exonic hg19 NA BG953951 Out-of-frame Inter-chr q12.2 q13.13 Tumor suppressor gene 110796 ChimerSeq ChiTaRs ChiTaRs CPEB3-LY86-AS1 CPEB3 chr10 93870527 LY86-AS1 chr6 6491962 Exonic hg19 NA BE837631 Out-of-frame Inter-chr q23.32 p25.1 110797 ChimerSeq ChiTaRs ChiTaRs LOC399806-RBFOX2 LOC399806 chr10 102994678 RBFOX2 chr22 36234279 Exonic hg19 NA AK026741 Out-of-frame Inter-chr 110798 ChimerSeq ChiTaRs ChiTaRs BAMBI-BAMBI BAMBI chr10 28971857 BAMBI chr10 28971182 Exonic hg19 NA AW152241 Out-of-frame Intra-chr p12.1 p12.1 110799 ChimerSeq ChiTaRs ChiTaRs TBC1D9-TBC1D9 TBC1D9 chr4 141542964 TBC1D9 chr4 141543013 Exonic hg19 NA BF893381 Out-of-frame Intra-chr q31.21 q31.21 110800 ChimerSeq ChiTaRs ChiTaRs CALD1-DONSON CALD1 chr7 134470134 DONSON chr21 34994328 Exonic hg19 NA BE836491 Out-of-frame Inter-chr q33 q22.11 110801 ChimerSeq ChiTaRs ChiTaRs PCNP-OIP5 PCNP chr3 101307542 OIP5 chr15 41614146 Exonic hg19 NA BE080901 Out-of-frame Inter-chr q12.3 q15.1 110802 ChimerSeq ChiTaRs ChiTaRs STK10-STK10 STK10 chr5 171509344 STK10 chr5 171491770 Exonic hg19 NA CV378751 Out-of-frame Intra-chr q35.1 Tumor suppressor gene q35.1 Tumor suppressor gene 110803 ChimerSeq ChiTaRs ChiTaRs INPP5B-INPP5B INPP5B chr1 38384120 INPP5B chr1 38393827 Exonic hg19 NA AW364441 Out-of-frame Intra-chr p34.3 p34.3 110804 ChimerSeq ChiTaRs ChiTaRs EVI5-PEAK1 EVI5 chr1 92984775 PEAK1 chr15 77521577 Exonic hg19 NA BE143631 Out-of-frame Inter-chr p22.1 q24.3 110805 ChimerSeq ChiTaRs ChiTaRs SPTBN1-SPEN SPTBN1 chr2 54855302 SPEN chr1 16245519 Exonic hg19 NA BE938281 Out-of-frame Inter-chr p16.2 Tumor suppressor gene p36.21 Transcription factor 110806 ChimerSeq ChiTaRs ChiTaRs MED27-MED27 MED27 chr9 134773650 MED27 chr9 134752996 Exonic hg19 NA CA391201 Out-of-frame Intra-chr q34.13 q34.13 110807 ChimerSeq ChiTaRs ChiTaRs KCNQ3-EVI5 KCNQ3 chr8 133133675 EVI5 chr1 93112734 Exonic hg19 NA BF592861 Out-of-frame Inter-chr q24.22 p22.1 110808 ChimerSeq ChiTaRs ChiTaRs CAPN7-ACTR2 CAPN7 chr3 15288912 ACTR2 chr2 65495891 Exonic hg19 NA BE811631 Out-of-frame Inter-chr p25.1 p14 TKL:STKR 110809 ChimerSeq ChiTaRs ChiTaRs MED10-SPARCL1 MED10 chr5 6377309 SPARCL1 chr4 88415592 Exonic hg19 NA CA433841 Out-of-frame Inter-chr p15.31 q22.1 Tumor suppressor gene 110810 ChimerSeq ChiTaRs ChiTaRs UBR4-NRP1 UBR4 chr1 19456298 NRP1 chr10 33480329 Exonic hg19 NA BF839271 Out-of-frame Inter-chr p36.13 p11.22 110811 ChimerSeq ChiTaRs ChiTaRs NDRG1-NDRG1 NDRG1 chr8 134250250 NDRG1 chr8 134250884 Exonic hg19 NA AA341881 Out-of-frame Intra-chr q24.22 Tumor suppressor gene q24.22 Tumor suppressor gene 110812 ChimerSeq ChiTaRs ChiTaRs AUTS2-MIR548AI AUTS2 chr7 69290710 MIR548AI chr14 30057617 Exonic hg19 NA M85971 Out-of-frame Inter-chr q11.22 q16.2 110813 ChimerSeq ChiTaRs ChiTaRs IP6K2-IP6K2 IP6K2 chr3 48731177 IP6K2 chr3 48731162 Exonic hg19 NA BX494271 Out-of-frame Intra-chr p21.31 p21.31 110814 ChimerSeq ChiTaRs ChiTaRs STAG2-STAG2 STAG2 chrX 123179218 STAG2 chrX 123190064 Exonic hg19 NA AW876601 Out-of-frame Intra-chr q25 Oncogene q25 Oncogene 110815 ChimerSeq ChiTaRs ChiTaRs KIAA1324-KIAA1324 KIAA1324 chr1 109727488 KIAA1324 chr1 109727539 Exonic hg19 NA BF373521 Out-of-frame Intra-chr p13.3 p13.3 110816 ChimerSeq ChiTaRs ChiTaRs MIR1256-MIR1256 MIR1256 chr10 74330872 MIR1256 chr10 74326143 Exonic hg19 NA AI392691 Out-of-frame Intra-chr p36.12 p36.12 110817 ChimerSeq ChiTaRs ChiTaRs EPHA7-DAB2IP EPHA7 chr6 94128225 DAB2IP chr9 124547456 Exonic hg19 NA CB242031 Out-of-frame Inter-chr q16.1 Oncogene q33.2 Tumor suppressor gene 110818 ChimerSeq ChiTaRs ChiTaRs DOK3-ACACA DOK3 chr5 176929254 ACACA chr17 35540059 Exonic hg19 NA BF511511 Out-of-frame Inter-chr q35.3 Tumor suppressor gene 110819 ChimerSeq ChiTaRs ChiTaRs CCDC18-MBP CCDC18 chr1 93658054 MBP chr18 74691999 Exonic hg19 NA DA132471 Out-of-frame Inter-chr p22.1 q23 110820 ChimerSeq ChiTaRs ChiTaRs FAM73A-BOLA2 FAM73A chr1 78296562 BOLA2 chr16 30080880 Exonic hg19 NA AW956481 Out-of-frame Inter-chr p11.2 110821 ChimerSeq ChiTaRs ChiTaRs UTRN-LOC284998 UTRN chr6 144860490 LOC284998 chr2 105365834 Exonic hg19 NA BF811861 Out-of-frame Inter-chr q24.2 110822 ChimerSeq ChiTaRs ChiTaRs SNRNP200-SNRNP200 SNRNP200 chr2 96950405 SNRNP200 chr2 96950482 Exonic hg19 NA BG497601 Out-of-frame Intra-chr q11.2 q11.2 110823 ChimerSeq ChiTaRs ChiTaRs ANKRD17-ANKRD17 ANKRD17 chr4 74099013 ANKRD17 chr4 74114993 Exonic hg19 NA BX115271 Out-of-frame Intra-chr q13.3 q13.3 110824 ChimerSeq ChiTaRs ChiTaRs GGPS1-PBRM1 GGPS1 chr1 235492093 PBRM1 chr3 52714218 Exonic hg19 NA Z21101 5'UTR-5'UTR Inter-chr q42.3 p21.1 Oncogene Tumor suppressor gene 110825 ChimerSeq ChiTaRs ChiTaRs CGA-PSMC2 CGA chr6 87795497 PSMC2 chr7 103008430 Exonic hg19 NA BF985831 Out-of-frame Inter-chr q14.3 q22.1 110826 ChimerSeq ChiTaRs ChiTaRs FBXO38-RNF216 FBXO38 chr5 147774475 RNF216 chr7 5769130 Exonic hg19 NA DA054181 Out-of-frame Inter-chr q32 p22.1 110827 ChimerSeq ChiTaRs ChiTaRs ZEB1-ZEB1 ZEB1 chr10 31817646 ZEB1 chr10 31817568 Exonic hg19 NA BI333151 Out-of-frame Intra-chr p11.22 Transcription factor p11.22 Transcription factor 110828 ChimerSeq ChiTaRs ChiTaRs HIVEP1-HIVEP1 HIVEP1 chr6 12162120 HIVEP1 chr6 12161868 Exonic hg19 NA AA602271 Out-of-frame Intra-chr p24.1 Tumor suppressor gene Transcription factor p24.1 Tumor suppressor gene Transcription factor 110829 ChimerSeq ChiTaRs ChiTaRs HLA-H-EPAS1 HLA-H chr6 1242901 EPAS1 chr2 46596972 Exonic hg19 NA AI283561 Out-of-frame Inter-chr p21 110830 ChimerSeq ChiTaRs ChiTaRs RPS6-GANAB RPS6 chr9 19378387 GANAB chr11 62406928 Exonic hg19 NA BF514651 Out-of-frame Inter-chr p22.1 q12.3 Tumor suppressor gene 110831 ChimerSeq ChiTaRs ChiTaRs DPYSL2-IWS1 DPYSL2 chr8 26514634 IWS1 chr2 128262322 Exonic hg19 NA BF361001 Out-of-frame Inter-chr p21.2 q14.3 110832 ChimerSeq ChiTaRs ChiTaRs GARS-DDX17 GARS chr7 30673527 DDX17 chr22 38879716 Exonic hg19 NA AI444651 Out-of-frame Inter-chr p14.3 q13.1 110833 ChimerSeq ChiTaRs ChiTaRs HAAO-AP3D1 HAAO chr2 42994604 AP3D1 chr19 2101134 Exonic hg19 NA AI912751 Out-of-frame Inter-chr p21 p13.3 110834 ChimerSeq ChiTaRs ChiTaRs SQSTM1-SQSTM1 SQSTM1 chr5 179263677 SQSTM1 chr5 179263709 Exonic hg19 NA BG910921 Out-of-frame Intra-chr q35.3 q35.3 110835 ChimerSeq ChiTaRs ChiTaRs SERPINB6-SERPINB6 SERPINB6 chr6 2949285 SERPINB6 chr6 2948556 Exonic hg19 NA BM545171 Out-of-frame Intra-chr p25.2 p25.2 110836 ChimerSeq ChiTaRs ChiTaRs TMEM14C-TMEM14C TMEM14C chr6 10726187 TMEM14C chr6 10730865 Exonic hg19 NA CB161661 Out-of-frame Intra-chr p24.2 p24.2 110837 ChimerSeq ChiTaRs ChiTaRs PKP1-PKP1 PKP1 chr1 201301336 PKP1 chr1 201301331 Exonic hg19 NA BX502601 Out-of-frame Intra-chr q32.1 q32.1 110838 ChimerSeq ChiTaRs ChiTaRs FIGF-FIGF FIGF chrX 15402103 FIGF chrX 15363718 Exonic hg19 NA CB218801 Out-of-frame Intra-chr 110839 ChimerSeq ChiTaRs ChiTaRs MFHAS1-UBAP1 MFHAS1 chr8 8667231 UBAP1 chr9 34249864 Exonic hg19 NA BF354661 Out-of-frame Inter-chr p23.1 p13.3 110840 ChimerSeq ChiTaRs ChiTaRs RP9-AFF3 RP9 chr7 33134964 AFF3 chr2 100581840 Exonic hg19 NA BQ774911 Out-of-frame Inter-chr p14.3 q11.2 Oncogene 110841 ChimerSeq ChiTaRs ChiTaRs PHC3-PHC3 PHC3 chr3 169867932 PHC3 chr3 169886028 Exonic hg19 NA AW856591 Out-of-frame Intra-chr q26.2 Tumor suppressor gene q26.2 Tumor suppressor gene 110842 ChimerSeq ChiTaRs ChiTaRs TMF1-TMF1 TMF1 chr3 69072075 TMF1 chr3 69071822 Exonic hg19 NA BG164911 Out-of-frame Intra-chr p14.1 Transcription factor p14.1 Transcription factor 110843 ChimerSeq ChiTaRs ChiTaRs API5-PLIN3 API5 chr11 43346657 PLIN3 chr19 4838860 Exonic hg19 NA BF223791 Out-of-frame Inter-chr p12 p13.3 110844 ChimerSeq ChiTaRs ChiTaRs EGFR-EGFR EGFR chr7 55099407 EGFR chr7 55098844 Exonic hg19 NA BF988221 Out-of-frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 TK:EGFR Oncogene 110845 ChimerSeq ChiTaRs ChiTaRs MDK-TMED2 MDK chr11 46405375 TMED2 chr12 124081494 Exonic hg19 NA BE858941 3'UTR-3'UTR Inter-chr p11.2 q24.31 110846 ChimerSeq ChiTaRs ChiTaRs FAT1-FAT1 FAT1 chr4 187552580 FAT1 chr4 187552589 Exonic hg19 NA CV359811 Out-of-frame Intra-chr q35.2 Tumor suppressor gene q35.2 Tumor suppressor gene 110847 ChimerSeq ChiTaRs ChiTaRs JTB-JTB JTB chr1 153948340 JTB chr1 153947266 Exonic hg19 NA CR997721 Out-of-frame Intra-chr q21.3 q21.3 110848 ChimerSeq ChiTaRs ChiTaRs DENND3-MZB1 DENND3 chr8 142168402 MZB1 chr5 138723804 Exonic hg19 NA BE928741 Out-of-frame Inter-chr q24.3 q31.2 Tumor suppressor gene 110849 ChimerSeq ChiTaRs ChiTaRs HNRNPAB-RAD23A HNRNPAB chr5 177636232 RAD23A chr19 13059002 Exonic hg19 NA N98411 Out-of-frame Inter-chr q35.3 p13.13 110850 ChimerSeq ChiTaRs ChiTaRs FAM129A-CXCL16 FAM129A chr1 184765735 CXCL16 chr17 4637545 Exonic hg19 NA AI770161 Out-of-frame Inter-chr q25.3 p13.2 110851 ChimerSeq ChiTaRs ChiTaRs DPP10-RAB10 DPP10 chr2 115276903 RAB10 chr2 26340621 Exonic hg19 NA BF958171 Out-of-frame Intra-chr q14.1 p23.3 110852 ChimerSeq ChiTaRs ChiTaRs DIAPH2-DIAPH2 DIAPH2 chrX 95961925 DIAPH2 chrX 95961808 Exonic hg19 NA BF985761 Out-of-frame Intra-chr q21.33 q21.33 110853 ChimerSeq ChiTaRs ChiTaRs FN1-FN1 FN1 chr2 216235038 FN1 chr2 216241312 Exonic hg19 NA BP286661 Out-of-frame Intra-chr q35 Oncogene q35 Oncogene 110854 ChimerSeq ChiTaRs ChiTaRs GNB2L1-GNB2L1 GNB2L1 chr5 180664323 GNB2L1 chr5 180665949 Exonic hg19 NA AA328791 Out-of-frame Intra-chr Tumor suppressor gene Tumor suppressor gene 110855 ChimerSeq ChiTaRs ChiTaRs PARG-ATF4 PARG chr10 51592455 ATF4 chr22 39918593 Exonic hg19 NA BF850881 Out-of-frame Inter-chr q11.23 q13.1 Transcription factor 110856 ChimerSeq ChiTaRs ChiTaRs NCKAP1-NCKAP1 NCKAP1 chr2 183789839 NCKAP1 chr2 183789764 Exonic hg19 NA BU674621 Out-of-frame Intra-chr q32.1 q32.1 110857 ChimerSeq ChiTaRs ChiTaRs TARS-FGFR1OP TARS chr5 33461281 FGFR1OP chr6 167446254 Exonic hg19 NA BQ312341 Out-of-frame Inter-chr p13.3 q27 110858 ChimerSeq ChiTaRs ChiTaRs CD74-CD74 CD74 chr5 149781367 CD74 chr5 149781379 Exonic hg19 NA H20291 Out-of-frame Intra-chr q33.1 q33.1 110859 ChimerSeq ChiTaRs ChiTaRs NFIB-KIF13B NFIB chr9 14082130 KIF13B chr8 28988123 Exonic hg19 NA DB383011 Out-of-frame Inter-chr p22.3 Transcription factor p12 110860 ChimerSeq ChiTaRs ChiTaRs FAM122C-TFDP1 FAM122C chrX 133974869 TFDP1 chr13 114278884 Exonic hg19 NA BF853321 Out-of-frame Inter-chr q26.3 q34 Transcription factor 110861 ChimerSeq ChiTaRs ChiTaRs HNRNPU-VPS39 HNRNPU chr1 245019231 VPS39 chr15 42479509 Exonic hg19 NA BI023341 Out-of-frame Inter-chr q44 q15.1 110862 ChimerSeq ChiTaRs ChiTaRs MGEA5-ZC3HAV1 MGEA5 chr10 103552485 ZC3HAV1 chr7 138728266 Exonic hg19 NA AW979061 Out-of-frame Inter-chr q24.32 q34 110863 ChimerSeq ChiTaRs ChiTaRs FAM120B-SYN1 FAM120B chr6 170654093 SYN1 chrX 47445377 Exonic hg19 NA DB289761 Out-of-frame Inter-chr p11.23 110864 ChimerSeq ChiTaRs ChiTaRs SFT2D1-SFT2D1 SFT2D1 chr6 166733630 SFT2D1 chr6 166733654 Exonic hg19 NA CF127281 Out-of-frame Intra-chr q27 q27 110865 ChimerSeq ChiTaRs ChiTaRs CCT4-CCT4 CCT4 chr2 62095709 CCT4 chr2 62095707 Exonic hg19 NA CB243441 Out-of-frame Intra-chr p15 p15 110866 ChimerSeq ChiTaRs ChiTaRs RABGAP1L-ALB RABGAP1L chr1 174189518 ALB chr4 74283248 Exonic hg19 NA AI064841 Out-of-frame Inter-chr q25.1 q13.3 110867 ChimerSeq ChiTaRs ChiTaRs HESX1-FAT3 HESX1 chr3 57233983 FAT3 chr11 92168987 Exonic hg19 NA U82811 Out-of-frame Inter-chr p14.3 Transcription factor 110868 ChimerSeq ChiTaRs ChiTaRs ZKSCAN1-ZKSCAN1 ZKSCAN1 chr7 99628059 ZKSCAN1 chr7 99621774 Exonic hg19 NA BE709591 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Transcription factor 110869 ChimerSeq ChiTaRs ChiTaRs PDZD2-MAP3K9 PDZD2 chr5 31731224 MAP3K9 chr14 71216710 Exonic hg19 NA BQ311551 Out-of-frame Inter-chr p13.3 q24.2 110870 ChimerSeq ChiTaRs ChiTaRs HIATL1-SH3GLB1 HIATL1 chr9 97191777 SH3GLB1 chr1 87212678 Exonic hg19 NA AW376951 Out-of-frame Inter-chr p22.3 Tumor suppressor gene 110871 ChimerSeq ChiTaRs ChiTaRs COL3A1-COL3A1 COL3A1 chr2 189876847 COL3A1 chr2 189876843 Exonic hg19 NA CN367151 Out-of-frame Intra-chr q32.2 q32.2 110872 ChimerSeq ChiTaRs ChiTaRs SENP7-SENP7 SENP7 chr3 101043526 SENP7 chr3 101043118 Exonic hg19 NA BG912251 Out-of-frame Intra-chr q12.3 q12.3 110873 ChimerSeq ChiTaRs ChiTaRs RLF-KPNA6 RLF chr1 40705149 KPNA6 chr1 32639538 Exonic hg19 NA BE176401 Out-of-frame Intra-chr p34.2 Transcription factor p35.2 110874 ChimerSeq ChiTaRs ChiTaRs ERGIC1-ERGIC1 ERGIC1 chr5 172378528 ERGIC1 chr5 172378692 Exonic hg19 NA AW798061 Out-of-frame Intra-chr q35.1 q35.1 110875 ChimerSeq ChiTaRs ChiTaRs IDS-PAIP2 IDS chrX 148564599 PAIP2 chr5 138705082 Exonic hg19 NA BP384531 Out-of-frame Inter-chr q28 q31.2 Tumor suppressor gene 110876 ChimerSeq ChiTaRs ChiTaRs MGST3-TRAPPC6A MGST3 chr1 165624056 TRAPPC6A chr19 45666435 Exonic hg19 NA BG956101 Out-of-frame Inter-chr q24.1 q13.32 110877 ChimerSeq ChiTaRs ChiTaRs QRICH1-SRSF11 QRICH1 chr3 49094516 SRSF11 chr1 70697735 Exonic hg19 NA BF351361 Out-of-frame Inter-chr p21.31 p31.1 110878 ChimerSeq ChiTaRs ChiTaRs ACO1-ACO1 ACO1 chr9 32416448 ACO1 chr9 32416441 Exonic hg19 NA AA572951 Out-of-frame Intra-chr p21.1 p21.1 110879 ChimerSeq ChiTaRs ChiTaRs INTS9-GNB3 INTS9 chr8 28654528 GNB3 chr12 6956490 Exonic hg19 NA BM715141 Out-of-frame Inter-chr p21.1 p13.31 110880 ChimerSeq ChiTaRs ChiTaRs PUM2-PPM1H PUM2 chr2 20449465 PPM1H chr12 63062909 Exonic hg19 NA BI022001 Out-of-frame Inter-chr p24.1 q14.2 110881 ChimerSeq ChiTaRs ChiTaRs NDUFS1-ABI1 NDUFS1 chr2 207022065 ABI1 chr10 27046549 Exonic hg19 NA BE896021 Out-of-frame Inter-chr p12.1 110882 ChimerSeq ChiTaRs ChiTaRs KDM5C-KDM5C KDM5C chrX 53230852 KDM5C chrX 53228185 Exonic hg19 NA BF327651 Out-of-frame Intra-chr p11.22 Oncogene p11.22 Oncogene 110883 ChimerSeq ChiTaRs ChiTaRs CPA1-CPA1 CPA1 chr7 130023587 CPA1 chr7 130023582 Exonic hg19 NA W40131 Out-of-frame Intra-chr q32.2 q32.2 110884 ChimerSeq ChiTaRs ChiTaRs HIST2H2BF-MICAL3 HIST2H2BF chr1 149764620 MICAL3 chr22 18272381 Exonic hg19 NA DA087301 Out-of-frame Inter-chr q21.2 q11.21 110885 ChimerSeq ChiTaRs ChiTaRs HDLBP-NXPH4 HDLBP chr2 242170361 NXPH4 chr12 57616691 Exonic hg19 NA BE715731 Out-of-frame Inter-chr q37.3 q13.3 110886 ChimerSeq ChiTaRs ChiTaRs USP33-USP33 USP33 chr1 78183598 USP33 chr1 78183517 Exonic hg19 NA AA255861 Out-of-frame Intra-chr p31.1 Tumor suppressor gene p31.1 Tumor suppressor gene 110887 ChimerSeq ChiTaRs ChiTaRs MIR548O2-MIR548O2 MIR548O2 chr8 29931548 MIR548O2 chr8 29927222 Exonic hg19 NA BE180701 Out-of-frame Intra-chr q11.23 q11.23 110888 ChimerSeq ChiTaRs ChiTaRs MIR548H3-EXOC6B MIR548H3 chr6 97593210 EXOC6B chr2 72968497 Exonic hg19 NA BF086581 Out-of-frame Inter-chr p12 p13.2 110889 ChimerSeq ChiTaRs ChiTaRs SH3TC2-SH3TC2 SH3TC2 chr5 148230794 SH3TC2 chr5 148214469 Exonic hg19 NA AJ413271 Out-of-frame Intra-chr q32 q32 110890 ChimerSeq ChiTaRs ChiTaRs YME1L1-BRD8 YME1L1 chr10 27405194 BRD8 chr5 137502252 Exonic hg19 NA BE939651 Out-of-frame Inter-chr p12.1 q31.2 110891 ChimerSeq ChiTaRs ChiTaRs PTPRJ-PTPRJ PTPRJ chr11 48063534 PTPRJ chr11 48070315 Exonic hg19 NA BE160331 Out-of-frame Intra-chr p11.2 Tumor suppressor gene p11.2 Tumor suppressor gene 110892 ChimerSeq ChiTaRs ChiTaRs SERINC1-SERINC1 SERINC1 chr6 122772849 SERINC1 chr6 122779700 Exonic hg19 NA BE178201 Out-of-frame Intra-chr q22.31 q22.31 110893 ChimerSeq ChiTaRs ChiTaRs SERPING1-SERPING1 SERPING1 chr11 57373901 SERPING1 chr11 57373965 Exonic hg19 NA AW964941 Out-of-frame Intra-chr q12.1 q12.1 110894 ChimerSeq ChiTaRs ChiTaRs FBXW4-ANKRD44 FBXW4 chr10 103411583 ANKRD44 chr2 197969512 Exonic hg19 NA AA640671 Out-of-frame Inter-chr q24.32 q33.1 110895 ChimerSeq ChiTaRs ChiTaRs TACC1-TACC1 TACC1 chr8 38708623 TACC1 chr8 38708602 Exonic hg19 NA BI760021 Out-of-frame Intra-chr p11.22 p11.22 110896 ChimerSeq ChiTaRs ChiTaRs TMEM2-BHLHE40 TMEM2 chr9 74298459 BHLHE40 chr3 5022207 Exonic hg19 NA AA588011 Out-of-frame Inter-chr q21.13 p26.1 Transcription factor 110897 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-INS-IGF2 INS-IGF2 chr11 2150993 INS-IGF2 chr11 2151042 Exonic hg19 NA BQ360861 Out-of-frame Intra-chr p15.5 p15.5 Oncogene 110898 ChimerSeq ChiTaRs ChiTaRs UBXN11-CDS2 UBXN11 chr1 26608980 CDS2 chr20 5172014 Exonic hg19 NA CB052191 Out-of-frame Inter-chr p36.11 p12.3 110899 ChimerSeq ChiTaRs ChiTaRs TTN-TTN TTN chr2 179612283 TTN chr2 179610700 Exonic hg19 NA BF824891 Out-of-frame Intra-chr q31.2 CAMK:MLCK q31.2 CAMK:MLCK 110900 ChimerSeq ChiTaRs ChiTaRs MAP4K4-MAP4K4 MAP4K4 chr2 102509164 MAP4K4 chr2 102508384 Exonic hg19 NA CN280691 Out-of-frame Intra-chr q11.2 q11.2 110901 ChimerSeq ChiTaRs ChiTaRs SCRG1-TRIM5 SCRG1 chr4 174320256 TRIM5 chr11 5719750 Exonic hg19 NA BQ007861 Out-of-frame Inter-chr q34.1 p15.4 110902 ChimerSeq ChiTaRs ChiTaRs COL6A3-ARHGEF11 COL6A3 chr2 238268029 ARHGEF11 chr1 157015094 Exonic hg19 NA BE693421 Out-of-frame Inter-chr q37.3 q23.1 110903 ChimerSeq ChiTaRs ChiTaRs MRFAP1-TOP1 MRFAP1 chr4 6644033 TOP1 chr20 39741589 Exonic hg19 NA BQ366641 Out-of-frame Inter-chr p16.1 q12 Oncogene 110904 ChimerSeq ChiTaRs ChiTaRs GFPT2-GFPT2 GFPT2 chr5 179728102 GFPT2 chr5 179727749 Exonic hg19 NA AW867731 Out-of-frame Intra-chr q35.3 q35.3 110905 ChimerSeq ChiTaRs ChiTaRs KIAA0226-S100B KIAA0226 chr3 197400168 S100B chr21 48020038 Exonic hg19 NA BG764251 Out-of-frame Inter-chr q22.3 110906 ChimerSeq ChiTaRs ChiTaRs OSGEPL1-OSGEPL1 OSGEPL1 chr2 190612911 OSGEPL1 chr2 190613401 Exonic hg19 NA CR747071 Out-of-frame Intra-chr q32.2 q32.2 110907 ChimerSeq ChiTaRs ChiTaRs DCAF8-DCAF8 DCAF8 chr1 160185740 DCAF8 chr1 160185505 Exonic hg19 NA BG178531 Out-of-frame Intra-chr q23.2 q23.2 110908 ChimerSeq ChiTaRs ChiTaRs PBX1-WBSCR22 PBX1 chr1 164725145 WBSCR22 chr7 73107704 Exonic hg19 NA T11661 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor 110909 ChimerSeq ChiTaRs ChiTaRs PURG-PURG PURG chr8 30882332 PURG chr8 30881703 Exonic hg19 NA CN370241 Out-of-frame Intra-chr p12 Transcription factor p12 Transcription factor 110910 ChimerSeq ChiTaRs ChiTaRs TMEM158-TMEM158 TMEM158 chr3 45266369 TMEM158 chr3 45265958 Exonic hg19 NA CN274951 Out-of-frame Intra-chr p21.31 p21.31 110911 ChimerSeq ChiTaRs ChiTaRs KIAA0232-SLC12A8 KIAA0232 chr4 6884604 SLC12A8 chr3 124852206 Exonic hg19 NA BF095281 Out-of-frame Inter-chr p16.1 q21.2 110912 ChimerSeq ChiTaRs ChiTaRs TSPYL2-NCL TSPYL2 chrX 53117721 NCL chr2 232320184 Exonic hg19 NA AW235151 Out-of-frame Inter-chr p11.22 q37.1 110913 ChimerSeq ChiTaRs ChiTaRs ENAH-ENAH ENAH chr1 225685223 ENAH chr1 225681436 Exonic hg19 NA BM874481 Out-of-frame Intra-chr q42.12 q42.12 110914 ChimerSeq ChiTaRs ChiTaRs TMEM63A-PTPN13 TMEM63A chr1 226041083 PTPN13 chr4 87641648 Exonic hg19 NA AI338527 Out-of-frame Inter-chr q42.12 q21.3 Tumor suppressor gene 110915 ChimerSeq ChiTaRs ChiTaRs H19-WDR62 H19 chr11 2019035 WDR62 chr19 36561143 Exonic hg19 NA AF118081 Out-of-frame Inter-chr p15.5 Tumor suppressor gene q13.12 110916 ChimerSeq ChiTaRs ChiTaRs HNRNPA2B1-EPB41L1 HNRNPA2B1 chr7 26237059 EPB41L1 chr20 34701926 Exonic hg19 NA AW853161 Out-of-frame Inter-chr p15.2 q11.23 110917 ChimerSeq ChiTaRs ChiTaRs GCK-FRA10AC1 GCK chr7 44184218 FRA10AC1 chr10 95450597 Exonic hg19 NA BF885201 Out-of-frame Inter-chr p13 STE:STE20 q23.33 110918 ChimerSeq ChiTaRs ChiTaRs ATP1B1-ATP1B1 ATP1B1 chr1 169100715 ATP1B1 chr1 169100819 Exonic hg19 NA BE163191 Out-of-frame Intra-chr q24.2 q24.2 110919 ChimerSeq ChiTaRs ChiTaRs NCSTN-NCSTN NCSTN chr1 160322976 NCSTN chr1 160326439 Exonic hg19 NA BF849781 Out-of-frame Intra-chr q23.2 q23.2 110920 ChimerSeq ChiTaRs ChiTaRs ZMIZ2-C14orf166 ZMIZ2 chr7 44802886 C14orf166 chr14 52466456 Exonic hg19 NA BI059831 Out-of-frame Inter-chr p13 q22.1 110921 ChimerSeq ChiTaRs ChiTaRs PLD5-NAMPT PLD5 chr1 242370136 NAMPT chr7 105917540 Exonic hg19 NA BQ335321 Out-of-frame Inter-chr q43 q22.3 110922 ChimerSeq ChiTaRs ChiTaRs GALM-SNX14 GALM chr2 38961013 SNX14 chr6 86216319 Exonic hg19 NA BX107111 Out-of-frame Inter-chr p22.1 q14.3 110923 ChimerSeq ChiTaRs ChiTaRs SNCAIP-SNCAIP SNCAIP chr5 121799380 SNCAIP chr5 121799381 Exonic hg19 NA N71201 Out-of-frame Intra-chr q23.2 q23.2 110924 ChimerSeq ChiTaRs ChiTaRs SFPQ-CEP95 SFPQ chr1 35651301 CEP95 chr17 62525506 Exonic hg19 NA DA570611 Out-of-frame Inter-chr p34.3 q23.3 110925 ChimerSeq ChiTaRs ChiTaRs TSIX-TSIX TSIX chrX 73046332 TSIX chrX 73041970 Exonic hg19 NA BF081541 Out-of-frame Intra-chr q13.2 q13.2 110926 ChimerSeq ChiTaRs ChiTaRs DCAF8-EIF2D DCAF8 chr1 160248798 EIF2D chr1 206772357 Exonic hg19 NA AI299201 Out-of-frame Intra-chr q23.2 q32.1 110927 ChimerSeq ChiTaRs ChiTaRs SPTBN1-SF3A3 SPTBN1 chr2 54896812 SF3A3 chr1 38423050 Exonic hg19 NA BG291041 Out-of-frame Inter-chr p16.2 Tumor suppressor gene p34.3 110928 ChimerSeq ChiTaRs ChiTaRs NSL1-NSL1 NSL1 chr1 212916530 NSL1 chr1 212916912 Exonic hg19 NA DW467681 Out-of-frame Intra-chr q32.3 q32.3 110929 ChimerSeq ChiTaRs ChiTaRs ANTXR2-IGFBP3 ANTXR2 chr4 80994240 IGFBP3 chr7 45951958 Exonic hg19 NA AK091721 Out-of-frame Inter-chr q21.21 p12.3 Tumor suppressor gene 110930 ChimerSeq ChiTaRs ChiTaRs NFASC-DVL3 NFASC chr1 204978922 DVL3 chr3 183873176 Exonic hg19 NA U75651 Out-of-frame Inter-chr q32.1 q27.1 110931 ChimerSeq ChiTaRs ChiTaRs PLAC8-PDS5A PLAC8 chr4 84011408 PDS5A chr4 39971781 Exonic hg19 NA T93881 Out-of-frame Intra-chr q21.22 p14 110932 ChimerSeq ChiTaRs ChiTaRs CNKSR3-RABGAP1L CNKSR3 chr6 154799764 RABGAP1L chr1 174507377 Exonic hg19 NA BF358231 Out-of-frame Inter-chr q25.2 q25.1 110933 ChimerSeq ChiTaRs ChiTaRs SQSTM1-RABGAP1L SQSTM1 chr5 179250053 RABGAP1L chr1 174834521 Exonic hg19 NA BE277531 CDS-5'UTR Inter-chr q35.3 q25.1 110934 ChimerSeq ChiTaRs ChiTaRs EHF-EHF EHF chr11 34643875 EHF chr11 34668085 Exonic hg19 NA BE005401 Out-of-frame Intra-chr p13 Tumor suppressor gene Transcription factor p13 Tumor suppressor gene Transcription factor 110935 ChimerSeq ChiTaRs ChiTaRs VRK2-FANCL VRK2 chr2 58386502 FANCL chr2 58388657 Exonic hg19 NA CN421381 Out-of-frame Intra-chr p16.1 CK1:VRK p16.1 Seq+ 110936 ChimerSeq ChiTaRs ChiTaRs SPIN1-C16orf72 SPIN1 chr9 91022068 C16orf72 chr16 9204405 Exonic hg19 NA BM678681 Out-of-frame Inter-chr q22.1 p13.2 110937 ChimerSeq ChiTaRs ChiTaRs PSMB7-PSMB7 PSMB7 chr9 127177711 PSMB7 chr9 127167596 Exonic hg19 NA W23061 Out-of-frame Intra-chr q33.3 q33.3 110938 ChimerSeq ChiTaRs ChiTaRs MPHOSPH10-MPHOSPH10 MPHOSPH10 chr2 71377231 MPHOSPH10 chr2 71361183 Exonic hg19 NA BU686351 Out-of-frame Intra-chr p13.3 p13.3 110939 ChimerSeq ChiTaRs ChiTaRs FSTL5-NFYC FSTL5 chr4 162786032 NFYC chr1 41236625 Exonic hg19 NA BQ012815 Out-of-frame Inter-chr q32.2 p34.2 Transcription factor 110940 ChimerSeq ChiTaRs ChiTaRs PTPRJ-MED26 PTPRJ chr11 48018427 MED26 chr19 16706253 Exonic hg19 NA BI019721 Out-of-frame Inter-chr p11.2 Tumor suppressor gene p13.11 110941 ChimerSeq ChiTaRs ChiTaRs RPL10-RNF213 RPL10 chrX 153629004 RNF213 chr17 78318971 Exonic hg19 NA AW581181 Out-of-frame Inter-chr q28 Tumor suppressor gene q25.3 Oncogene 110942 ChimerSeq ChiTaRs ChiTaRs EIF4A2-EIF4A2 EIF4A2 chr3 186506792 EIF4A2 chr3 186506836 Exonic hg19 NA BG979271 Out-of-frame Intra-chr q27.3 q27.3 110943 ChimerSeq ChiTaRs ChiTaRs WDR70-MALAT1 WDR70 chr5 37616906 MALAT1 chr11 65267243 Exonic hg19 NA BF735251 Out-of-frame Inter-chr p13.2 q13.1 110944 ChimerSeq ChiTaRs ChiTaRs CHTOP-S100A13 CHTOP chr1 153606824 S100A13 chr1 153604213 Exonic hg19 NA AI830371 Out-of-frame Intra-chr q21.3 q21.3 Seq+ 110945 ChimerSeq ChiTaRs ChiTaRs MAP3K7-MAP3K7 MAP3K7 chr6 91269880 MAP3K7 chr6 91269884 Exonic hg19 NA BF082281 Out-of-frame Intra-chr q15 STE:STE11 Oncogene q15 STE:STE11 Oncogene 110946 ChimerSeq ChiTaRs ChiTaRs ATG13-FTL ATG13 chr11 46678738 FTL chr19 49469491 Exonic hg19 NA BF858831 Out-of-frame Inter-chr p11.2 q13.33 110947 ChimerSeq ChiTaRs ChiTaRs IFT172-RMND5A IFT172 chr2 27680141 RMND5A chr2 87916873 Exonic hg19 NA BE068971 Out-of-frame Intra-chr p23.3 p11.2 110948 ChimerSeq ChiTaRs ChiTaRs AR-MRPL16 AR chrX 66949840 MRPL16 chr11 59573613 Exonic hg19 NA CB163511 Out-of-frame Inter-chr q12 Oncogene Tumor suppressor gene Transcription factor q12.1 110949 ChimerSeq ChiTaRs ChiTaRs TRIO-MOV10 TRIO chr5 14369606 MOV10 chr1 113241269 Exonic hg19 NA BF926051 Out-of-frame Inter-chr p15.2 p13.2 110950 ChimerSeq ChiTaRs ChiTaRs EIF4G1-EIF4G1 EIF4G1 chr3 184040965 EIF4G1 chr3 184038480 Exonic hg19 NA AU133771 Out-of-frame Intra-chr q27.1 q27.1 110951 ChimerSeq ChiTaRs ChiTaRs FAF1-FAF1 FAF1 chr1 51105332 FAF1 chr1 51104449 Exonic hg19 NA AA664391 Out-of-frame Intra-chr p32.3 p32.3 110952 ChimerSeq ChiTaRs ChiTaRs USP34-TUBGCP3 USP34 chr2 61474476 TUBGCP3 chr13 113168824 Exonic hg19 NA AW893271 Out-of-frame Inter-chr p15 110953 ChimerSeq ChiTaRs ChiTaRs TMSB10-WAC TMSB10 chr2 85133707 WAC chr10 28826619 Exonic hg19 NA BI016131 Out-of-frame Inter-chr p11.2 p12.1 110954 ChimerSeq ChiTaRs ChiTaRs SLC44A5-ATP6V1C2 SLC44A5 chr1 76072128 ATP6V1C2 chr2 10923876 Exonic hg19 NA AW952701 Out-of-frame Inter-chr p31.1 p25.1 110955 ChimerSeq ChiTaRs ChiTaRs PDPN-VEZT PDPN chr1 13944452 VEZT chr12 95667565 Exonic hg19 NA BU677131 3'UTR-CDS Inter-chr p36.21 q22 Tumor suppressor gene 110956 ChimerSeq ChiTaRs ChiTaRs FMNL2-SEC24C FMNL2 chr2 153300686 SEC24C chr10 75526109 Exonic hg19 NA BG998981 Out-of-frame Inter-chr q23.3 q22.2 110957 ChimerSeq ChiTaRs ChiTaRs TOP2B-FBN1 TOP2B chr3 25650827 FBN1 chr15 48805839 Exonic hg19 NA AW609921 Out-of-frame Inter-chr p24.2 q21.1 110958 ChimerSeq ChiTaRs ChiTaRs SNAP47-SNAP47 SNAP47 chr1 227934334 SNAP47 chr1 227933662 Exonic hg19 NA BE007891 Out-of-frame Intra-chr q42.13 q42.13 110959 ChimerSeq ChiTaRs ChiTaRs IFRD2-IFRD2 IFRD2 chr3 50326761 IFRD2 chr3 50326685 Exonic hg19 NA BF338431 Out-of-frame Intra-chr p21.31 p21.31 110960 ChimerSeq ChiTaRs ChiTaRs AFTPH-WDPCP AFTPH chr2 64803916 WDPCP chr2 63383853 Exonic hg19 NA CR736341 Out-of-frame Intra-chr p14 p15 110961 ChimerSeq ChiTaRs ChiTaRs SYT13-NPEPPS SYT13 chr11 45263063 NPEPPS chr17 45608604 Exonic hg19 NA Y07701 Out-of-frame Inter-chr p11.2 Tumor suppressor gene q21.32 110962 ChimerSeq ChiTaRs ChiTaRs SLC4A7-SLC4A7 SLC4A7 chr3 27478997 SLC4A7 chr3 27465607 Exonic hg19 NA AA216661 Out-of-frame Intra-chr p24.1 p24.1 110963 ChimerSeq ChiTaRs ChiTaRs ABI2-GOLGA4 ABI2 chr2 204250912 GOLGA4 chr3 37309437 Exonic hg19 NA BF805291 Out-of-frame Inter-chr q33.2 Tumor suppressor gene p22.2 110964 ChimerSeq ChiTaRs ChiTaRs TSPAN4-TSPAN4 TSPAN4 chr11 867111 TSPAN4 chr11 847226 Exonic hg19 NA CB528901 Out-of-frame Intra-chr p15.5 p15.5 110965 ChimerSeq ChiTaRs ChiTaRs PPP2R2D-CPNE2 PPP2R2D chr10 133769311 CPNE2 chr16 57144810 Exonic hg19 NA AF542551 Out-of-frame Inter-chr q26.3 q13 110966 ChimerSeq ChiTaRs ChiTaRs COL1A2-PLK1S1 COL1A2 chr7 94053702 PLK1S1 chr20 21142524 Exonic hg19 NA AW366281 Out-of-frame Inter-chr q21.3 110967 ChimerSeq ChiTaRs ChiTaRs SURF4-SPTLC2 SURF4 chr9 136228561 SPTLC2 chr14 77972559 Exonic hg19 NA N98751 Out-of-frame Inter-chr q24.3 110968 ChimerSeq ChiTaRs ChiTaRs GCG-CPA1 GCG chr2 163008737 CPA1 chr7 130023244 Exonic hg19 NA BE969791 Out-of-frame Inter-chr q24.2 q32.2 110969 ChimerSeq ChiTaRs ChiTaRs SFTPB-SFTPB SFTPB chr2 85891990 SFTPB chr2 85891998 Exonic hg19 NA BF849841 Out-of-frame Intra-chr p11.2 p11.2 110970 ChimerSeq ChiTaRs ChiTaRs TNFRSF21-MAMLD1 TNFRSF21 chr6 47253968 MAMLD1 chrX 149540925 Exonic hg19 NA BE720121 Out-of-frame Inter-chr p12.3 q28 110971 ChimerSeq ChiTaRs ChiTaRs YY1AP1-PRCC YY1AP1 chr1 155736445 PRCC chr1 156770241 Exonic hg19 NA BI009431 Out-of-frame Intra-chr q22 q23.1 110972 ChimerSeq ChiTaRs ChiTaRs MYO10-MYO10 MYO10 chr5 16694612 MYO10 chr5 16703058 Exonic hg19 NA CA337601 Out-of-frame Intra-chr p15.1 p15.1 110973 ChimerSeq ChiTaRs ChiTaRs HBP1-LRP1 HBP1 chr7 106838620 LRP1 chr12 57600474 Exonic hg19 NA BF856941 Out-of-frame Inter-chr Tumor suppressor gene Transcription factor q13.3 110974 ChimerSeq ChiTaRs ChiTaRs RRP12-PTMA RRP12 chr10 99126522 PTMA chr2 232576674 Exonic hg19 NA BM473671 Out-of-frame Inter-chr q24.1 q37.1 110975 ChimerSeq ChiTaRs ChiTaRs YWHAZ-ACTL6A YWHAZ chr8 101947468 ACTL6A chr3 179304363 Exonic hg19 NA BF754131 Out-of-frame Inter-chr q22.3 q26.33 110976 ChimerSeq ChiTaRs ChiTaRs NR6A1-ATF3 NR6A1 chr9 127441202 ATF3 chr1 212786881 Exonic hg19 NA BF853631 Out-of-frame Inter-chr q33.3 Transcription factor q32.3 Tumor suppressor gene Transcription factor 110977 ChimerSeq ChiTaRs ChiTaRs CLSTN1-CLSTN1 CLSTN1 chr1 9795603 CLSTN1 chr1 9791820 Exonic hg19 NA BQ882651 Out-of-frame Intra-chr p36.22 p36.22 110978 ChimerSeq ChiTaRs ChiTaRs KIAA0319L-GNAS KIAA0319L chr1 35997554 GNAS chr20 57478772 Exonic hg19 NA BG992511 Out-of-frame Inter-chr p34.3 q13.32 Oncogene 110979 ChimerSeq ChiTaRs ChiTaRs SENP5-STAMBPL1 SENP5 chr3 196654803 STAMBPL1 chr10 90700104 Exonic hg19 NA BE930751 Out-of-frame Inter-chr q29 q23.31 110980 ChimerSeq ChiTaRs ChiTaRs CENPP-CENPP CENPP chr9 95146396 CENPP chr9 95146357 Exonic hg19 NA AI040141 Out-of-frame Intra-chr q22.31 q22.31 110981 ChimerSeq ChiTaRs ChiTaRs PDE1C-LAT2 PDE1C chr7 32089152 LAT2 chr7 73643778 Exonic hg19 NA AV724221 Out-of-frame Intra-chr p14.3 q11.23 Tumor suppressor gene 110982 ChimerSeq ChiTaRs ChiTaRs SLC25A36-SLC25A36 SLC25A36 chr3 140696034 SLC25A36 chr3 140682047 Exonic hg19 NA BM839671 Out-of-frame Intra-chr q23 q23 110983 ChimerSeq ChiTaRs ChiTaRs EIF5B-EIF5B EIF5B chr2 99980326 EIF5B chr2 99988116 Exonic hg19 NA AW839731 Out-of-frame Intra-chr q11.2 q11.2 110984 ChimerSeq ChiTaRs ChiTaRs FRA10AC1-RNF213 FRA10AC1 chr10 95434780 RNF213 chr17 78368053 Exonic hg19 NA BE836631 Out-of-frame Inter-chr q23.33 q25.3 Oncogene 110985 ChimerSeq ChiTaRs ChiTaRs FNIP2-GDF15 FNIP2 chr4 159793881 GDF15 chr19 18499921 Exonic hg19 NA BC030251 Out-of-frame Inter-chr q32.1 p13.11 110986 ChimerSeq ChiTaRs ChiTaRs STOM-PCYOX1L STOM chr9 124101405 PCYOX1L chr5 148743561 Exonic hg19 NA AW449111 Out-of-frame Inter-chr q33.2 q32 110987 ChimerSeq ChiTaRs ChiTaRs ANAPC16-ANAPC16 ANAPC16 chr10 73779952 ANAPC16 chr10 73784749 Exonic hg19 NA BE144861 Out-of-frame Intra-chr q22.1 q22.1 110988 ChimerSeq ChiTaRs ChiTaRs CTNND1-ARHGEF10L CTNND1 chr11 57510507 ARHGEF10L chr1 18018483 Exonic hg19 NA AI868281 Out-of-frame Inter-chr q12.1 Tumor suppressor gene p36.13 110989 ChimerSeq ChiTaRs ChiTaRs MTA2-MTA2 MTA2 chr11 62362857 MTA2 chr11 62362822 Exonic hg19 NA BF748421 Out-of-frame Intra-chr q12.3 q12.3 110990 ChimerSeq ChiTaRs ChiTaRs C1orf85-LOC100507412 C1orf85 chr1 156263972 LOC100507412 chr? 110411 Exonic hg19 NA BF994881 Out-of-frame Inter-chr 110991 ChimerSeq ChiTaRs ChiTaRs PUM2-ZNF334 PUM2 chr2 20494255 ZNF334 chr20 45130146 Exonic hg19 NA BE837491 Out-of-frame Inter-chr p24.1 q13.12 Transcription factor 110992 ChimerSeq ChiTaRs ChiTaRs PLEKHA6-SQSTM1 PLEKHA6 chr1 204191728 SQSTM1 chr5 179263991 Exonic hg19 NA BF369651 Out-of-frame Inter-chr q32.1 q35.3 110993 ChimerSeq ChiTaRs ChiTaRs PRPF40A-PRPF40A PRPF40A chr2 153515823 PRPF40A chr2 153519180 Exonic hg19 NA BF336471 Out-of-frame Intra-chr q23.3 q23.3 110994 ChimerSeq ChiTaRs ChiTaRs EFHD1-TRAPPC3 EFHD1 chr2 233547461 TRAPPC3 chr1 36602318 Exonic hg19 NA AI880161 Out-of-frame Inter-chr q37.1 p34.3 110995 ChimerSeq ChiTaRs ChiTaRs FBXL2-FBXL2 FBXL2 chr3 33414815 FBXL2 chr3 33414819 Exonic hg19 NA AA558641 Out-of-frame Intra-chr p22.3 p22.3 110996 ChimerSeq ChiTaRs ChiTaRs SLC12A7-NEAT1 SLC12A7 chr5 1052472 NEAT1 chr11 65192378 Exonic hg19 NA BQ355091 Out-of-frame Inter-chr p15.33 q13.1 110997 ChimerSeq ChiTaRs ChiTaRs LPP-LPP LPP chr3 188598657 LPP chr3 188598075 Exonic hg19 NA BP420721 Out-of-frame Intra-chr q27.3 Oncogene q27.3 Oncogene 110998 ChimerSeq ChiTaRs ChiTaRs FIS1-SIN3A FIS1 chr7 100887158 SIN3A chr15 75722655 Exonic hg19 NA AW866901 Out-of-frame Inter-chr q22.1 q24.2 110999 ChimerSeq ChiTaRs ChiTaRs SERGEF-SERGEF SERGEF chr11 17832902 SERGEF chr11 17833424 Exonic hg19 NA CV357741 Out-of-frame Intra-chr p15.1 p15.1 111000 ChimerSeq ChiTaRs ChiTaRs COL24A1-TMEM181 COL24A1 chr1 86351677 TMEM181 chr6 158971044 Exonic hg19 NA AY203961 Out-of-frame Inter-chr p22.3 q25.3 111001 ChimerSeq ChiTaRs ChiTaRs ERBB2IP-ERBB2IP ERBB2IP chr5 65350779 ERBB2IP chr5 65317148 Exonic hg19 NA BP311501 Out-of-frame Intra-chr 111002 ChimerSeq ChiTaRs ChiTaRs NKAIN1-EMILIN2 NKAIN1 chr1 31658964 EMILIN2 chr18 2870235 Exonic hg19 NA AW835691 Out-of-frame Inter-chr p35.2 p11.32 111003 ChimerSeq ChiTaRs ChiTaRs RHOA-AHNAK2 RHOA chr3 49397743 AHNAK2 chr14 105404366 Exonic hg19 NA BQ354371 Out-of-frame Inter-chr p21.31 Oncogene Tumor suppressor gene q32.33 111004 ChimerSeq ChiTaRs ChiTaRs PDE4B-PDE4B PDE4B chr1 66839611 PDE4B chr1 66797687 Exonic hg19 NA L20971 Out-of-frame Intra-chr p31.3 p31.3 111005 ChimerSeq ChiTaRs ChiTaRs NGEF-NGEF NGEF chr2 233792861 NGEF chr2 233791753 Exonic hg19 NA DA153061 5'UTR-CDS Intra-chr q37.1 q37.1 111006 ChimerSeq ChiTaRs ChiTaRs PTPRG-ZNF236 PTPRG chr3 61756592 ZNF236 chr18 74681364 Exonic hg19 NA BI052221 Out-of-frame Inter-chr p14.2 q23 Transcription factor 111007 ChimerSeq ChiTaRs ChiTaRs ATP11C-ATP11C ATP11C chrX 138824213 ATP11C chrX 138823571 Exonic hg19 NA BE082951 Out-of-frame Intra-chr q27.1 q27.1 111008 ChimerSeq ChiTaRs ChiTaRs CD46-NUCB2 CD46 chr1 207967871 NUCB2 chr11 17336989 Exonic hg19 NA BF991091 Out-of-frame Inter-chr q32.2 p15.1 111009 ChimerSeq ChiTaRs ChiTaRs MRPL18-TBCEL MRPL18 chr6 160211572 TBCEL chr11 120907666 Exonic hg19 NA AV656211 Out-of-frame Inter-chr q25.3 q23.3 111010 ChimerSeq ChiTaRs ChiTaRs ENTPD1-RPL13 ENTPD1 chr10 97485346 RPL13 chr16 89627137 Exonic hg19 NA BE796741 Out-of-frame Inter-chr q24.1 q24.3 111011 ChimerSeq ChiTaRs ChiTaRs TIAM2-TFB1M TIAM2 chr6 155578342 TFB1M chr6 155580968 Exonic hg19 NA BM993771 Out-of-frame Intra-chr q25.2 q25.3 111012 ChimerSeq ChiTaRs ChiTaRs ITGB8-ITGB8 ITGB8 chr7 20454770 ITGB8 chr7 20454303 Exonic hg19 NA BE774581 Out-of-frame Intra-chr p21.1 p21.1 111013 ChimerSeq ChiTaRs ChiTaRs MUC4-MUC4 MUC4 chr3 195477374 MUC4 chr3 195487821 Exonic hg19 NA DA435621 Out-of-frame Intra-chr 111014 ChimerSeq ChiTaRs ChiTaRs EIF3H-EIF3H EIF3H chr8 117738339 EIF3H chr8 117669490 Exonic hg19 NA AW372241 Out-of-frame Intra-chr q24.11 q24.11 111015 ChimerSeq ChiTaRs ChiTaRs MYO10-MYO10 MYO10 chr5 16701939 MYO10 chr5 16703082 Exonic hg19 NA AK025921 Out-of-frame Intra-chr p15.1 p15.1 111016 ChimerSeq ChiTaRs ChiTaRs SYNPO-SYNPO SYNPO chr5 150031901 SYNPO chr5 150031686 Exonic hg19 NA BE466511 Out-of-frame Intra-chr q33.1 q33.1 111017 ChimerSeq ChiTaRs ChiTaRs SEC63-LRRC39 SEC63 chr6 108189584 LRRC39 chr1 100616247 Exonic hg19 NA BQ006221 Out-of-frame Inter-chr q21 p21.2 111018 ChimerSeq ChiTaRs ChiTaRs H6PD-EPHB2 H6PD chr1 9322641 EPHB2 chr1 23060268 Exonic hg19 NA BF738611 Out-of-frame Intra-chr p36.22 p36.12 Tumor suppressor gene 111019 ChimerSeq ChiTaRs ChiTaRs CACNB4-RTKN CACNB4 chr2 152740722 RTKN chr2 74659104 Exonic hg19 NA BF853581 Out-of-frame Intra-chr q23.3 p13.1 111020 ChimerSeq ChiTaRs ChiTaRs DPYSL3-VPS37B DPYSL3 chr5 146772644 VPS37B chr12 123368892 Exonic hg19 NA BE830391 Out-of-frame Inter-chr q32 q24.31 111021 ChimerSeq ChiTaRs ChiTaRs PDS5A-PDS5A PDS5A chr4 39826436 PDS5A chr4 39825654 Exonic hg19 NA BM449661 Out-of-frame Intra-chr p14 p14 111022 ChimerSeq ChiTaRs ChiTaRs CDK20-ACO2 CDK20 chr9 90584246 ACO2 chr22 41903923 Exonic hg19 NA CV352271 Out-of-frame Inter-chr q22.1 q13.2 111023 ChimerSeq ChiTaRs ChiTaRs HNRNPU-HNRNPU HNRNPU chr1 245021413 HNRNPU chr1 245018868 Exonic hg19 NA CN262461 Out-of-frame Intra-chr q44 q44 111024 ChimerSeq ChiTaRs ChiTaRs RHOH-RHOH RHOH chr4 40202523 RHOH chr4 40202639 Exonic hg19 NA AA480541 Out-of-frame Intra-chr p14 Oncogene p14 Oncogene 111025 ChimerSeq ChiTaRs ChiTaRs SSR3-KIF3B SSR3 chr3 156258158 KIF3B chr20 30920942 Exonic hg19 NA AI159851 Out-of-frame Inter-chr q25.31 q11.21 111026 ChimerSeq ChiTaRs ChiTaRs LHX2-NR2F1 LHX2 chr9 126795222 NR2F1 chr5 92929455 Exonic hg19 NA BF953191 Out-of-frame Inter-chr q33.3 Transcription factor q15 Transcription factor 111027 ChimerSeq ChiTaRs ChiTaRs TMSB4X-SC5DL TMSB4X chrX 12995011 SC5DL chr11 121163480 Exonic hg19 NA D85181 Out-of-frame Inter-chr p22.2 111028 ChimerSeq ChiTaRs ChiTaRs EIF4G3-GGA1 EIF4G3 chr1 21268229 GGA1 chr22 38021101 Exonic hg19 NA BQ319981 Out-of-frame Inter-chr p36.12 q13.1 111029 ChimerSeq ChiTaRs ChiTaRs EIF4G1-EIF4G1 EIF4G1 chr3 184043088 EIF4G1 chr3 184042116 Exonic hg19 NA BQ212371 Out-of-frame Intra-chr q27.1 q27.1 111030 ChimerSeq ChiTaRs ChiTaRs ADAP1-ATN1 ADAP1 chr7 970982 ATN1 chr12 7043377 Exonic hg19 NA BF761741 Out-of-frame Inter-chr p22.3 p13.31 111031 ChimerSeq ChiTaRs ChiTaRs RPL14-SENP6 RPL14 chr3 40503146 SENP6 chr6 76411705 Exonic hg19 NA BP334301 Out-of-frame Inter-chr p22.1 q14.1 111032 ChimerSeq ChiTaRs ChiTaRs CCDC93-MOB2 CCDC93 chr2 118712309 MOB2 chr11 1774314 Exonic hg19 NA AW362571 Out-of-frame Inter-chr q14.1 p15.5 111033 ChimerSeq ChiTaRs ChiTaRs PIAS3-PODN PIAS3 chr1 145585161 PODN chr1 53543355 Exonic hg19 NA AW748401 Out-of-frame Intra-chr q21.1 p32.3 111034 ChimerSeq ChiTaRs ChiTaRs TP53BP2-RPL30 TP53BP2 chr1 223968077 RPL30 chr8 99057180 Exonic hg19 NA AW662691 Out-of-frame Inter-chr q41 Tumor suppressor gene q22.2 111035 ChimerSeq ChiTaRs ChiTaRs R3HDM1-YTHDC1 R3HDM1 chr2 136432942 YTHDC1 chr4 14330 Exonic hg19 NA BF798521 Out-of-frame Inter-chr q21.3 111036 ChimerSeq ChiTaRs ChiTaRs RCHY1-YWHAG RCHY1 chr4 76407481 YWHAG chr7 75956263 Exonic hg19 NA BQ376661 Out-of-frame Inter-chr q21.1 Tumor suppressor gene q11.23 111037 ChimerSeq ChiTaRs ChiTaRs PNPT1-PNPT1 PNPT1 chr2 55906852 PNPT1 chr2 55894144 Exonic hg19 NA BI025641 Out-of-frame Intra-chr p16.1 p16.1 111038 ChimerSeq ChiTaRs ChiTaRs VPS37A-SLC4A5 VPS37A chr8 17112118 SLC4A5 chr2 74452082 Exonic hg19 NA BE162411 Out-of-frame Inter-chr p22 p13.1 111039 ChimerSeq ChiTaRs ChiTaRs RAF1-MSS51 RAF1 chr3 12638239 MSS51 chr10 75183710 Exonic hg19 NA AA262871 Out-of-frame Inter-chr p25.2 TKL:RAF Oncogene q22.2 111040 ChimerSeq ChiTaRs ChiTaRs TLR8-AS1-AASS TLR8-AS1 chrX 12939444 AASS chr7 121715791 Exonic hg19 NA H48691 Out-of-frame Inter-chr p22.2 q31.32 Tumor suppressor gene 111041 ChimerSeq ChiTaRs ChiTaRs PARG-ZNF565 PARG chr10 51562517 ZNF565 chr19 36693683 Exonic hg19 NA BF002721 Out-of-frame Inter-chr q11.23 q13.12 Transcription factor 111042 ChimerSeq ChiTaRs ChiTaRs PPP2R2A-PPP2R2A PPP2R2A chr8 26228218 PPP2R2A chr8 26228002 Exonic hg19 NA AW879061 Out-of-frame Intra-chr p21.2 p21.2 111043 ChimerSeq ChiTaRs ChiTaRs RUNX1T1-RUNX1T1 RUNX1T1 chr8 92983012 RUNX1T1 chr8 93115169 Exonic hg19 NA BF478161 Out-of-frame Intra-chr q21.3 Oncogene q21.3 Oncogene 111044 ChimerSeq ChiTaRs ChiTaRs SUB1-PDHA1 SUB1 chr5 32591771 PDHA1 chrX 19373566 Exonic hg19 NA CB113851 Out-of-frame Inter-chr p13.3 p22.12 111045 ChimerSeq ChiTaRs ChiTaRs KCNIP3-KCNIP3 KCNIP3 chr2 95996105 KCNIP3 chr2 95995403 Exonic hg19 NA AA666181 Out-of-frame Intra-chr q11.1 Transcription factor q11.1 Transcription factor 111046 ChimerSeq ChiTaRs ChiTaRs PBX1-GPR56 PBX1 chr1 164657315 GPR56 chr16 57664730 Exonic hg19 NA BG987581 Out-of-frame Inter-chr q23.3 Oncogene Transcription factor q21 111047 ChimerSeq ChiTaRs ChiTaRs LRP2-PAPPA LRP2 chr2 169983795 PAPPA chr9 118988097 Exonic hg19 NA CV324821 Out-of-frame Inter-chr q31.1 q33.1 111048 ChimerSeq ChiTaRs ChiTaRs KIAA2026-PAPPA KIAA2026 chr9 5920986 PAPPA chr9 118975407 Exonic hg19 NA BF992941 Out-of-frame Intra-chr p24.1 q33.1 111049 ChimerSeq ChiTaRs ChiTaRs BTN3A2-ARHGAP26 BTN3A2 chr6 26377497 ARHGAP26 chr5 142607308 Exonic hg19 NA AW378991 Out-of-frame Inter-chr p22.2 q31.3 111050 ChimerSeq ChiTaRs ChiTaRs KIN-KIN KIN chr10 7797862 KIN chr10 7798031 Exonic hg19 NA CB243501 Out-of-frame Intra-chr p14 Transcription factor p14 Transcription factor 111051 ChimerSeq ChiTaRs ChiTaRs VPS72-VPS72 VPS72 chr1 151149024 VPS72 chr1 151150536 Exonic hg19 NA CB219131 Out-of-frame Intra-chr q21.3 q21.3 111052 ChimerSeq ChiTaRs ChiTaRs BRCC3-TRA@ BRCC3 chrX 154299925 TRA@ chr14 23016445 Exonic hg19 NA S68020 Out-of-frame Inter-chr q28 q11.2 111053 ChimerSeq ChiTaRs ChiTaRs SUFU-SUFU SUFU chr10 104391012 SUFU chr10 104389903 Exonic hg19 NA AA362631 Out-of-frame Intra-chr q24.32 Oncogene Tumor suppressor gene q24.32 Oncogene Tumor suppressor gene 111054 ChimerSeq ChiTaRs ChiTaRs TJAP1-NACC2 TJAP1 chr6 43446439 NACC2 chr9 138934537 Exonic hg19 NA DB230331 Out-of-frame Inter-chr p21.1 q34.3 Transcription factor 111055 ChimerSeq ChiTaRs ChiTaRs CGA-PRG2 CGA chr6 87795320 PRG2 chr11 57156671 Exonic hg19 NA AA368821 Out-of-frame Inter-chr q14.3 q12.1 111056 ChimerSeq ChiTaRs ChiTaRs ZDHHC21-VPS37C ZDHHC21 chr9 14678577 VPS37C chr11 60917150 Exonic hg19 NA BF328511 Out-of-frame Inter-chr p22.3 q12.2 111057 ChimerSeq ChiTaRs ChiTaRs SMAP2-SMAP2 SMAP2 chr1 40888461 SMAP2 chr1 40888245 Exonic hg19 NA BF874331 Out-of-frame Intra-chr p34.2 p34.2 111058 ChimerSeq ChiTaRs ChiTaRs HIVEP3-HIVEP3 HIVEP3 chr1 41985063 HIVEP3 chr1 41985059 Exonic hg19 NA AA578261 Out-of-frame Intra-chr p34.2 Tumor suppressor gene Transcription factor p34.2 Tumor suppressor gene Transcription factor 111059 ChimerSeq ChiTaRs ChiTaRs NSUN2-SLC25A39 NSUN2 chr5 6607412 SLC25A39 chr17 42400209 Exonic hg19 NA CN363781 Out-of-frame Inter-chr p15.31 q21.31 111060 ChimerSeq ChiTaRs ChiTaRs BARD1-CASC4 BARD1 chr2 215609766 CASC4 chr15 44706166 Exonic hg19 NA BG168151 Out-of-frame Inter-chr q35 Tumor suppressor gene q15.3 111061 ChimerSeq ChiTaRs ChiTaRs PSMB4-PSMB4 PSMB4 chr1 151373296 PSMB4 chr1 151373277 Exonic hg19 NA CB854321 Out-of-frame Intra-chr q21.3 q21.3 111062 ChimerSeq ChiTaRs ChiTaRs MPHOSPH10-AES MPHOSPH10 chr2 71362794 AES chr19 3053161 Exonic hg19 NA BE835141 Out-of-frame Inter-chr p13.3 p13.3 111063 ChimerSeq ChiTaRs ChiTaRs SAT1-SAT1 SAT1 chrX 23803181 SAT1 chrX 23802946 Exonic hg19 NA BE180881 Out-of-frame Intra-chr p22.11 p22.11 111064 ChimerSeq ChiTaRs ChiTaRs RGMB-CPD RGMB chr5 98119575 CPD chr17 28796192 Exonic hg19 NA BE173641 Out-of-frame Inter-chr q15 q11.2 Tumor suppressor gene 111065 ChimerSeq ChiTaRs ChiTaRs PCDHA1-NRXN1 PCDHA1 chr5 140390938 NRXN1 chr2 50918612 Exonic hg19 NA T07051 Out-of-frame Inter-chr q31.3 p16.3 111066 ChimerSeq ChiTaRs ChiTaRs TIMMDC1-FAM160B1 TIMMDC1 chr3 119219495 FAM160B1 chr10 116601643 Exonic hg19 NA AW890881 Out-of-frame Inter-chr q13.33 q25.3 111067 ChimerSeq ChiTaRs ChiTaRs STX12-JARID2 STX12 chr1 28105487 JARID2 chr6 15297417 Exonic hg19 NA CA436861 Out-of-frame Inter-chr p35.3 p22.3 111068 ChimerSeq ChiTaRs ChiTaRs MCM7-MCM7 MCM7 chr7 99690960 MCM7 chr7 99690409 Exonic hg19 NA BF971291 Out-of-frame Intra-chr q22.1 q22.1 111069 ChimerSeq ChiTaRs ChiTaRs UTRN-UTRN UTRN chr6 145162027 UTRN chr6 145162029 Exonic hg19 NA BF372141 Out-of-frame Intra-chr q24.2 q24.2 111070 ChimerSeq ChiTaRs ChiTaRs GAK-ATP6V0A2 GAK chr4 846864 ATP6V0A2 chr12 124245736 Exonic hg19 NA BU679901 Out-of-frame Inter-chr p16.3 Other:NAK q24.31 111071 ChimerSeq ChiTaRs ChiTaRs H1FX-H1FX H1FX chr3 129034289 H1FX chr3 129033841 Exonic hg19 NA AW612361 Out-of-frame Intra-chr q21.3 q21.3 111072 ChimerSeq ChiTaRs ChiTaRs PNISR-QRSL1 PNISR chr6 99860666 QRSL1 chr6 107100080 Exonic hg19 NA CK902891 Out-of-frame Intra-chr q16.2 q21 111073 ChimerSeq ChiTaRs ChiTaRs USP1-USP1 USP1 chr1 62916702 USP1 chr1 62917055 Exonic hg19 NA BG291031 Out-of-frame Intra-chr p31.3 p31.3 111074 ChimerSeq ChiTaRs ChiTaRs PVT1-ANXA2 PVT1 chr8 128832547 ANXA2 chr15 60639536 Exonic hg19 NA AK126411 Out-of-frame Inter-chr q24.21 q22.2 111075 ChimerSeq ChiTaRs ChiTaRs ELOVL5-SGIP1 ELOVL5 chr6 53133172 SGIP1 chr1 67175153 Exonic hg19 NA BE929601 Out-of-frame Inter-chr p12.1 p31.3 111076 ChimerSeq ChiTaRs ChiTaRs TRIM2-CSNK1D TRIM2 chr4 154198489 CSNK1D chr17 80202172 Exonic hg19 NA U29171 Out-of-frame Inter-chr q31.3 q25.3 111077 ChimerSeq ChiTaRs ChiTaRs DCLRE1C-DCLRE1C DCLRE1C chr10 14951196 DCLRE1C chr10 14950887 Exonic hg19 NA AA558011 Out-of-frame Intra-chr p13 p13 111078 ChimerSeq ChiTaRs ChiTaRs ACTB-OSBPL3 ACTB chr7 5567413 OSBPL3 chr7 24887256 Exonic hg19 NA AW949281 Out-of-frame Intra-chr p22.1 p15.3 111079 ChimerSeq ChiTaRs ChiTaRs RPP14-STK11 RPP14 chr3 58305359 STK11 chr19 1224618 Exonic hg19 NA AI968661 Out-of-frame Inter-chr p14.3 p13.3 Oncogene Tumor suppressor gene 111080 ChimerSeq ChiTaRs ChiTaRs ASAH1-CTBP1 ASAH1 chr8 17923419 CTBP1 chr4 1236876 Exonic hg19 NA BF988401 Out-of-frame Inter-chr p22 p16.3 111081 ChimerSeq ChiTaRs ChiTaRs ST7-UBE2E2 ST7 chr7 116628262 UBE2E2 chr3 23315439 Exonic hg19 NA BQ348071 Out-of-frame Inter-chr q31.2 Tumor suppressor gene p24.3 111082 ChimerSeq ChiTaRs ChiTaRs MEMO1-MALAT1 MEMO1 chr2 32191067 MALAT1 chr11 65267458 Exonic hg19 NA BF800801 Out-of-frame Inter-chr p22.3 q13.1 111083 ChimerSeq ChiTaRs ChiTaRs KIFC2-SYNE1 KIFC2 chr8 145699498 SYNE1 chr6 152712465 Exonic hg19 NA DB297961 Out-of-frame Inter-chr q24.3 q25.2 Oncogene 111084 ChimerSeq ChiTaRs ChiTaRs TRAM1-RAP1A TRAM1 chr8 71516296 RAP1A chr1 112255277 Exonic hg19 NA AI207431 Out-of-frame Inter-chr q13.3 p13.2 Tumor suppressor gene 111085 ChimerSeq ChiTaRs ChiTaRs RBPMS-RBPMS RBPMS chr8 30428912 RBPMS chr8 30428598 Exonic hg19 NA BE002581 Out-of-frame Intra-chr p12 p12 111086 ChimerSeq ChiTaRs ChiTaRs TADA1-EBF1 TADA1 chr1 166845510 EBF1 chr5 158223353 Exonic hg19 NA CD701001 Out-of-frame Inter-chr q24.1 q33.3 Transcription factor 111087 ChimerSeq ChiTaRs ChiTaRs MIER1-DNM3 MIER1 chr1 67425427 DNM3 chr1 172065517 Exonic hg19 NA BF770401 Out-of-frame Intra-chr p31.3 q24.3 111088 ChimerSeq ChiTaRs ChiTaRs CPEB3-CPEB3 CPEB3 chr10 93987354 CPEB3 chr10 93988072 Exonic hg19 NA DW462381 Out-of-frame Intra-chr q23.32 q23.32 111089 ChimerSeq ChiTaRs ChiTaRs S100A10-AGBL5 S100A10 chr1 151955762 AGBL5 chr2 27293356 Exonic hg19 NA BQ276611 Out-of-frame Inter-chr q21.3 p23.3 111090 ChimerSeq ChiTaRs ChiTaRs KIAA1841-KIAA1841 KIAA1841 chr2 61345252 KIAA1841 chr2 61343114 Exonic hg19 NA AW301931 Out-of-frame Intra-chr p15 p15 111091 ChimerSeq ChiTaRs ChiTaRs FKBP5-ZNF347 FKBP5 chr6 35585552 ZNF347 chr19 53644572 Exonic hg19 NA BF927881 Out-of-frame Inter-chr p21.31 q13.42 Transcription factor 111092 ChimerSeq ChiTaRs ChiTaRs FN1-FN1 FN1 chr2 216251684 FN1 chr2 216298103 Exonic hg19 NA CN484091 Out-of-frame Intra-chr q35 Oncogene q35 Oncogene 111093 ChimerSeq ChiTaRs ChiTaRs RPLP2-MED15 RPLP2 chr11 811645 MED15 chr22 20922848 Exonic hg19 NA DB193761 5'UTR-CDS Inter-chr p15.5 q11.21 111094 ChimerSeq ChiTaRs ChiTaRs TNFAIP8-TNFAIP8 TNFAIP8 chr5 118671181 TNFAIP8 chr5 118671036 Exonic hg19 NA BF898691 Out-of-frame Intra-chr q23.1 q23.1 111095 ChimerSeq ChiTaRs ChiTaRs EXOC4-FARS2 EXOC4 chr7 133148742 FARS2 chr6 5725773 Exonic hg19 NA S63396 Out-of-frame Inter-chr q33 p25.1 111096 ChimerSeq ChiTaRs ChiTaRs PLCD4-MARC2 PLCD4 chr2 219489169 2002_ 3_ 1_ chr1 220932026 Exonic hg19 NA BX102201 Out-of-frame Inter-chr q35 111097 ChimerSeq ChiTaRs ChiTaRs RBBP4-NEAT1 RBBP4 chr1 33121815 NEAT1 chr11 65195738 Exonic hg19 NA BE926051 Out-of-frame Inter-chr p35.1 q13.1 111098 ChimerSeq ChiTaRs ChiTaRs EPHA10-KRT7 EPHA10 chr1 38222276 KRT7 chr12 52636869 Exonic hg19 NA BQ344001 Out-of-frame Inter-chr p34.3 q13.13 111099 ChimerSeq ChiTaRs ChiTaRs UST-CNKSR3 UST chr6 149203302 CNKSR3 chr6 154778110 Exonic hg19 NA DA572991 Out-of-frame Intra-chr q25.1 q25.2 111100 ChimerSeq ChiTaRs ChiTaRs IGF2BP2-IGF2BP2 IGF2BP2 chr3 185445273 IGF2BP2 chr3 185445645 Exonic hg19 NA N99491 Out-of-frame Intra-chr q27.2 q27.2 111101 ChimerSeq ChiTaRs ChiTaRs ARF1-ARF1 ARF1 chr1 228286442 ARF1 chr1 228286002 Exonic hg19 NA AL041701 Out-of-frame Intra-chr q42.13 Tumor suppressor gene q42.13 Tumor suppressor gene 111102 ChimerSeq ChiTaRs ChiTaRs PRRT1-LOC100507433 PRRT1 chr6 3464136 LOC100507433 chr19 38077488 Exonic hg19 NA BE703001 Out-of-frame Inter-chr 111103 ChimerSeq ChiTaRs ChiTaRs PCDH10-UBAP1 PCDH10 chr4 134106566 UBAP1 chr9 34179611 Exonic hg19 NA BF516551 Out-of-frame Inter-chr q28.3 Tumor suppressor gene p13.3 111104 ChimerSeq ChiTaRs ChiTaRs LOC100505806-EP300 LOC100505806 chr5 9550160 EP300 chr22 41544492 Exonic hg19 NA BE704331 Out-of-frame Inter-chr q13.2 Oncogene 111105 ChimerSeq ChiTaRs ChiTaRs MSL3-ALB MSL3 chrX 11778966 ALB chr4 74283960 Exonic hg19 NA AI114561 Out-of-frame Inter-chr p22.2 q13.3 111106 ChimerSeq ChiTaRs ChiTaRs BYSL-BYSL BYSL chr6 41900764 BYSL chr6 41900276 Exonic hg19 NA AI751001 Out-of-frame Intra-chr p21.1 p21.1 111107 ChimerSeq ChiTaRs ChiTaRs UBE2V2-UBE2V2 UBE2V2 chr8 48926561 UBE2V2 chr8 48926639 Exonic hg19 NA CV359411 Out-of-frame Intra-chr q11.21 q11.21 111108 ChimerSeq ChiTaRs ChiTaRs MSH3-MSH3 MSH3 chr5 80172560 MSH3 chr5 80172552 Exonic hg19 NA AA846951 Out-of-frame Intra-chr q14.1 q14.1 111109 ChimerSeq ChiTaRs ChiTaRs MSH6-MSH6 MSH6 chr2 48027515 MSH6 chr2 48027238 Exonic hg19 NA AW875091 Out-of-frame Intra-chr p16.3 Oncogene p16.3 Oncogene 111110 ChimerSeq ChiTaRs ChiTaRs FBXL18-TXNDC5 FBXL18 chr7 5538211 TXNDC5 chr6 8014841 Exonic hg19 NA BU631871 Out-of-frame Inter-chr p22.1 p24.3 111111 ChimerSeq ChiTaRs ChiTaRs CDC42-ABCF2 CDC42 chr1 22418471 ABCF2 chr7 150910627 Exonic hg19 NA CX781471 Out-of-frame Inter-chr p36.12 q36.1 111112 ChimerSeq ChiTaRs ChiTaRs LOC286190-LOC286190 LOC286190 chr8 71556391 LOC286190 chr8 71556355 Exonic hg19 NA CB242271 Out-of-frame Intra-chr 111113 ChimerSeq ChiTaRs ChiTaRs FAM126B-FTL FAM126B chr2 201912630 FTL chr19 49470074 Exonic hg19 NA AW297471 Out-of-frame Inter-chr q33.1 q13.33 111114 ChimerSeq ChiTaRs ChiTaRs C9orf3-C9orf3 C9orf3 chr9 97795191 C9orf3 chr9 97794998 Exonic hg19 NA BF753881 Out-of-frame Intra-chr q22.32 q22.32 111115 ChimerSeq ChiTaRs ChiTaRs ZFP91-ZFP91 ZFP91 chr11 58385414 ZFP91 chr11 58387779 Exonic hg19 NA BQ448441 Out-of-frame Intra-chr q12.1 Transcription factor q12.1 Transcription factor 111116 ChimerSeq ChiTaRs ChiTaRs MAST2-CSNK1G2 MAST2 chr1 46493468 CSNK1G2 chr19 1978996 Exonic hg19 NA BI040601 Out-of-frame Inter-chr p34.1 AGC:MAST p13.3 111117 ChimerSeq ChiTaRs ChiTaRs ERBB4-CSDE1 ERBB4 chr2 213144211 CSDE1 chr1 115268926 Exonic hg19 NA CA440341 Out-of-frame Inter-chr q34 Oncogene Tumor suppressor gene p13.2 111118 ChimerSeq ChiTaRs ChiTaRs PARG-CD163 PARG chr10 51590731 CD163 chr12 7647923 Exonic hg19 NA AI963901 Out-of-frame Inter-chr q11.23 p13.31 111119 ChimerSeq ChiTaRs ChiTaRs F11R-F11R F11R chr1 160967812 F11R chr1 160967521 Exonic hg19 NA AA662651 Out-of-frame Intra-chr q23.3 q23.3 111120 ChimerSeq ChiTaRs ChiTaRs TSC22D3-TM9SF3 TSC22D3 chrX 106956638 TM9SF3 chr10 98313378 Exonic hg19 NA AW118541 Out-of-frame Inter-chr q22.3 q24.1 111121 ChimerSeq ChiTaRs ChiTaRs PTPRD-FAM127B PTPRD chr9 8485882 FAM127B chrX 134185519 Exonic hg19 NA AA447501 Out-of-frame Inter-chr Oncogene Tumor suppressor gene 111122 ChimerSeq ChiTaRs ChiTaRs IDS-SNHG3 IDS chrX 148560630 SNHG3 chr1 28835590 Exonic hg19 NA BU622671 Out-of-frame Inter-chr q28 p35.3 111123 ChimerSeq ChiTaRs ChiTaRs LOC728743-TMEM108 LOC728743 chr7 150107802 TMEM108 chr3 133097210 Exonic hg19 NA BF828461 Out-of-frame Inter-chr q22.1 111124 ChimerSeq ChiTaRs ChiTaRs ITIH3-SPTLC1 ITIH3 chr3 52839336 SPTLC1 chr9 94809464 Exonic hg19 NA AI065091 Out-of-frame Inter-chr p21.1 q22.31 111125 ChimerSeq ChiTaRs ChiTaRs TMEM127-UPK1B TMEM127 chr2 96917451 UPK1B chr3 118923667 Exonic hg19 NA CB241811 Out-of-frame Inter-chr q11.2 Tumor suppressor gene q13.32 111126 ChimerSeq ChiTaRs ChiTaRs PEA15-PEA15 PEA15 chr1 160183852 PEA15 chr1 160184027 Exonic hg19 NA BF987701 Out-of-frame Intra-chr q23.2 Tumor suppressor gene q23.2 Tumor suppressor gene 111127 ChimerSeq ChiTaRs ChiTaRs FPGS-FPGS FPGS chr9 130565993 FPGS chr9 130565673 Exonic hg19 NA CN275141 Out-of-frame Intra-chr q34.11 q34.11 111128 ChimerSeq ChiTaRs ChiTaRs CAPZA1-VPS52 CAPZA1 chr1 113201380 VPS52 chr6 4712478 Exonic hg19 NA BG987401 Out-of-frame Inter-chr p13.2 111129 ChimerSeq ChiTaRs ChiTaRs GNB1-GNB1 GNB1 chr1 1717927 GNB1 chr1 1747267 Exonic hg19 NA W26101 Out-of-frame Intra-chr p36.33 p36.33 111130 ChimerSeq ChiTaRs ChiTaRs PHIP-PHIP PHIP chr6 79692831 PHIP chr6 79695116 Exonic hg19 NA CN298941 Out-of-frame Intra-chr q14.1 q14.1 111131 ChimerSeq ChiTaRs ChiTaRs FCHO2-ZNF271 FCHO2 chr5 72384341 ZNF271 chr18 32870278 Exonic hg19 NA AF153201 Out-of-frame Inter-chr q13.2 111132 ChimerSeq ChiTaRs ChiTaRs FN1-FN1 FN1 chr2 216236925 FN1 chr2 216236962 Exonic hg19 NA CN391591 Out-of-frame Intra-chr q35 Oncogene q35 Oncogene 111133 ChimerSeq ChiTaRs ChiTaRs CD74-GPC3 CD74 chr5 149781490 GPC3 chrX 132846201 Exonic hg19 NA BG153241 Out-of-frame Inter-chr q33.1 q26.2 Tumor suppressor gene 111134 ChimerSeq ChiTaRs ChiTaRs ITPR1-ITPR1 ITPR1 chr3 4874441 ITPR1 chr3 4875346 Exonic hg19 NA N42861 Out-of-frame Intra-chr p26.1 p26.1 111135 ChimerSeq ChiTaRs ChiTaRs LCT-MBTPS1 LCT chr2 136570529 MBTPS1 chr16 84115913 Exonic hg19 NA AY191611 Out-of-frame Inter-chr q21.3 q24.1 111136 ChimerSeq ChiTaRs ChiTaRs SLC1A3-TIMP2 SLC1A3 chr5 36688436 TIMP2 chr17 76850786 Exonic hg19 NA AI086141 3'UTR-3'UTR Inter-chr p13.2 q25.3 111137 ChimerSeq ChiTaRs ChiTaRs BST1-SLTM BST1 chr4 15733798 SLTM chr15 59192845 Exonic hg19 NA BE856481 Out-of-frame Inter-chr p15.32 q22.1 111138 ChimerSeq ChiTaRs ChiTaRs MTUS1-OASL MTUS1 chr8 17612513 OASL chr12 121458107 Exonic hg19 NA AF063611 Out-of-frame Inter-chr p22 Tumor suppressor gene q24.31 111139 ChimerSeq ChiTaRs ChiTaRs PCBP1-AS1-RNF8 PCBP1-AS1 chr2 70307898 RNF8 chr6 37332860 Exonic hg19 NA BQ315591 Out-of-frame Inter-chr p13.3 p21.2 Tumor suppressor gene 111140 ChimerSeq ChiTaRs ChiTaRs WDR37-WDR37 WDR37 chr10 1177197 WDR37 chr10 1174955 Exonic hg19 NA AA092371 Out-of-frame Intra-chr p15.3 p15.3 111141 ChimerSeq ChiTaRs ChiTaRs BDP1-BDP1 BDP1 chr5 70808255 BDP1 chr5 70798399 Exonic hg19 NA DA056281 Out-of-frame Intra-chr 111142 ChimerSeq ChiTaRs ChiTaRs SNHG3-AIFM1 SNHG3 chr1 28835429 AIFM1 chrX 129263342 Exonic hg19 NA BG108121 Out-of-frame Inter-chr p35.3 q26.1 111143 ChimerSeq ChiTaRs ChiTaRs PARL-PARL PARL chr3 183564778 PARL chr3 183579176 Exonic hg19 NA BE142911 Out-of-frame Intra-chr q27.1 q27.1 111144 ChimerSeq ChiTaRs ChiTaRs PNRC1-NRD1 PNRC1 chr6 89790783 NRD1 chr1 52306093 Exonic hg19 NA DB237521 Out-of-frame Inter-chr q15 111145 ChimerSeq ChiTaRs ChiTaRs FBXO18-FBXO18 FBXO18 chr10 5966447 FBXO18 chr10 5960410 Exonic hg19 NA N36571 Out-of-frame Intra-chr p15.1 p15.1 111146 ChimerSeq ChiTaRs ChiTaRs LOC100302640-SCAF8 LOC100302640 chr3 106872972 SCAF8 chr6 155112810 Exonic hg19 NA BG986771 Out-of-frame Inter-chr q25.2 111147 ChimerSeq ChiTaRs ChiTaRs LMNA-GAP43 LMNA chr1 156086800 GAP43 chr3 115342509 Exonic hg19 NA AK123311 Out-of-frame Inter-chr q22 q13.31 111148 ChimerSeq ChiTaRs ChiTaRs MTHFD1L-MTHFD1L MTHFD1L chr6 151301123 MTHFD1L chr6 151310926 Exonic hg19 NA AA829961 Out-of-frame Intra-chr q25.1 q25.1 111149 ChimerSeq ChiTaRs ChiTaRs CD59-CD59 CD59 chr11 33728114 CD59 chr11 33728451 Exonic hg19 NA BF510491 Out-of-frame Intra-chr p13 p13 111150 ChimerSeq ChiTaRs ChiTaRs PURB-PURB PURB chr7 44916735 PURB chr7 44919812 Exonic hg19 NA BE006611 Out-of-frame Intra-chr p13 Transcription factor p13 Transcription factor 111151 ChimerSeq ChiTaRs ChiTaRs EPC1-ZEB1 EPC1 chr10 32636130 ZEB1 chr10 31749965 Exonic hg19 NA DB111441 5'UTR-CDS Intra-chr p11.22 p11.22 Transcription factor 111152 ChimerSeq ChiTaRs ChiTaRs TFRC-FN1 TFRC chr3 195777621 FN1 chr2 216238086 Exonic hg19 NA AW854071 Out-of-frame Inter-chr q29 q35 Oncogene 111153 ChimerSeq ChiTaRs ChiTaRs UGGT1-RPL36 UGGT1 chr2 128947822 RPL36 chr19 5691635 Exonic hg19 NA BE881501 Out-of-frame Inter-chr q14.3 p13.3 111154 ChimerSeq ChiTaRs ChiTaRs SEC63-MIR548O2 SEC63 chr6 108192413 MIR548O2 chr8 29920910 Exonic hg19 NA BF838311 Out-of-frame Inter-chr q21 q11.23 111155 ChimerSeq ChiTaRs ChiTaRs CUL1-CUL1 CUL1 chr7 148498086 CUL1 chr7 148496416 Exonic hg19 NA BM127921 Out-of-frame Intra-chr q36.1 Tumor suppressor gene q36.1 Tumor suppressor gene 111156 ChimerSeq ChiTaRs ChiTaRs SPRY1-SPRY1 SPRY1 chr4 124318988 SPRY1 chr4 124324049 Exonic hg19 NA AU185671 Out-of-frame Intra-chr q28.1 q28.1 111157 ChimerSeq ChiTaRs ChiTaRs SP140-REPS1 SP140 chr2 231134281 REPS1 chr6 139226008 Exonic hg19 NA BE926221 Out-of-frame Inter-chr q37.1 Transcription factor q24.1 111158 ChimerSeq ChiTaRs ChiTaRs PTPN18-SMCR7L PTPN18 chr2 131132479 SMCR7L chr22 39910329 Exonic hg19 NA BF945261 Out-of-frame Inter-chr q21.1 111159 ChimerSeq ChiTaRs ChiTaRs CRLF2-U2AF1 CRLF2 chrY 1464447 U2AF1 chr21 44513067 Exonic hg19 NA AK123701 Out-of-frame Inter-chr p22.33 Oncogene q22.3 Oncogene 111160 ChimerSeq ChiTaRs ChiTaRs ADD1-ADD1 ADD1 chr4 2930438 ADD1 chr4 2929954 Exonic hg19 NA D44931 Out-of-frame Intra-chr p16.3 p16.3 111161 ChimerSeq ChiTaRs ChiTaRs PPP2CA-PPP2CA PPP2CA chr5 133532989 PPP2CA chr5 133532869 Exonic hg19 NA AA598481 Out-of-frame Intra-chr q31.1 Tumor suppressor gene q31.1 Tumor suppressor gene 111162 ChimerSeq ChiTaRs ChiTaRs PHRF1-EPCAM PHRF1 chr11 610989 EPCAM chr2 47606170 Exonic hg19 NA BF806271 Out-of-frame Inter-chr p15.5 p21 111163 ChimerSeq ChiTaRs ChiTaRs FAM184A-FAM184A FAM184A chr6 119345981 FAM184A chr6 119324059 Exonic hg19 NA BF923701 Out-of-frame Intra-chr q22.31 q22.31 111164 ChimerSeq ChiTaRs ChiTaRs TTF2-BRD9 TTF2 chr1 117644881 BRD9 chr5 864433 Exonic hg19 NA CB116761 Out-of-frame Inter-chr p13.1 p15.33 111165 ChimerSeq ChiTaRs ChiTaRs NBPF11-NBPF14 NBPF11 chr1 147931879 NBPF14 chr1 145004781 Exonic hg19 NA BC065231 Out-of-frame Intra-chr q21.2 q21.2 111166 ChimerSeq ChiTaRs ChiTaRs C6orf62-NEAT1 C6orf62 chr6 24711637 NEAT1 chr11 65191815 Exonic hg19 NA BE076991 Out-of-frame Inter-chr p22.3 q13.1 111167 ChimerSeq ChiTaRs ChiTaRs PAX8-CNDP2 PAX8 chr2 114001444 CNDP2 chr18 72176191 Exonic hg19 NA BF853131 Out-of-frame Inter-chr q14.1 Oncogene Transcription factor q22.3 Tumor suppressor gene 111168 ChimerSeq ChiTaRs ChiTaRs HARS-DUSP6 HARS chr5 140063132 DUSP6 chr12 89745830 Exonic hg19 NA DA527301 Out-of-frame Inter-chr q31.3 q21.33 Tumor suppressor gene 111169 ChimerSeq ChiTaRs ChiTaRs AHRR-AHRR AHRR chr5 428044 AHRR chr5 428033 Exonic hg19 NA BM723201 Out-of-frame Intra-chr p15.33 Tumor suppressor gene Transcription factor p15.33 Tumor suppressor gene Transcription factor 111170 ChimerSeq ChiTaRs ChiTaRs SVIP-WBP11 SVIP chr11 22849418 WBP11 chr12 14953695 Exonic hg19 NA AI337271 Out-of-frame Inter-chr p14.3 p12.3 111171 ChimerSeq ChiTaRs ChiTaRs PTK2-PTK2 PTK2 chr8 141683991 PTK2 chr8 141684059 Exonic hg19 NA AW577351 Out-of-frame Intra-chr q24.3 q24.3 111172 ChimerSeq ChiTaRs ChiTaRs CAPZB-CAPZB CAPZB chr1 19665924 CAPZB chr1 19665324 Exonic hg19 NA BI833201 Out-of-frame Intra-chr p36.13 p36.13 111173 ChimerSeq ChiTaRs ChiTaRs ACAA1-ACAA1 ACAA1 chr3 38167810 ACAA1 chr3 38168030 Exonic hg19 NA AA405551 Out-of-frame Intra-chr p22.2 p22.2 111174 ChimerSeq ChiTaRs ChiTaRs NOLC1-CIDEB NOLC1 chr10 103921672 CIDEB chr14 24775830 Exonic hg19 NA BF843971 Out-of-frame Inter-chr q24.32 q12 111175 ChimerSeq ChiTaRs ChiTaRs PLOD1-TUBB PLOD1 chr1 12035603 TUBB chr6 2020525 Exonic hg19 NA AA948311 Out-of-frame Inter-chr p36.22 111176 ChimerSeq ChiTaRs ChiTaRs SNX17-TXNL4B SNX17 chr2 27595535 TXNL4B chr16 72120303 Exonic hg19 NA DA980261 Out-of-frame Inter-chr p23.3 q22.2 111177 ChimerSeq ChiTaRs ChiTaRs ARID5B-DIS3L2 ARID5B chr10 63853995 DIS3L2 chr2 233182809 Exonic hg19 NA BF995991 Out-of-frame Inter-chr q21.2 Transcription factor q37.1 111178 ChimerSeq ChiTaRs ChiTaRs SGIP1-DLGAP1 SGIP1 chr1 67084773 DLGAP1 chr18 4264211 Exonic hg19 NA BF955391 Out-of-frame Inter-chr p31.3 p11.31 111179 ChimerSeq ChiTaRs ChiTaRs AAK1-USP19 AAK1 chr2 69748041 USP19 chr3 49149795 Exonic hg19 NA BQ335731 Out-of-frame Inter-chr p13.3 Other:NAK p21.31 111180 ChimerSeq ChiTaRs ChiTaRs MAPK14-MEMO1 MAPK14 chr6 36078536 MEMO1 chr2 32254755 Exonic hg19 NA CA429031 Out-of-frame Inter-chr p21.31 p22.3 111181 ChimerSeq ChiTaRs ChiTaRs PRKCI-PLK3 PRKCI chr3 170021535 PLK3 chr1 45270410 Exonic hg19 NA BE930931 Out-of-frame Inter-chr q26.2 p34.1 Other:PLK 111182 ChimerSeq ChiTaRs ChiTaRs SYNE1-CEACAM21 SYNE1 chr6 152702390 CEACAM21 chr19 42079403 Exonic hg19 NA BF902791 Out-of-frame Inter-chr q25.2 Oncogene 111183 ChimerSeq ChiTaRs ChiTaRs YARS-RNF19B YARS chr1 33282906 RNF19B chr1 33404011 Exonic hg19 NA BI828591 Out-of-frame Intra-chr p35.1 p35.1 Seq+ 111184 ChimerSeq ChiTaRs ChiTaRs DGKB-MALAT1 DGKB chr7 14806615 MALAT1 chr11 65266660 Exonic hg19 NA EY123371 Out-of-frame Inter-chr p21.2 q13.1 111185 ChimerSeq ChiTaRs ChiTaRs MYOT-MYOT MYOT chr5 137087548 MYOT chr5 137087681 Exonic hg19 NA BU680361 Out-of-frame Intra-chr q31.2 q31.2 111186 ChimerSeq ChiTaRs ChiTaRs PPIL3-RPH3A PPIL3 chr2 201753887 RPH3A chr12 113229729 Exonic hg19 NA DA112381 Out-of-frame Inter-chr q33.1 q24.13 111187 ChimerSeq ChiTaRs ChiTaRs BBX-BBX BBX chr3 107529075 BBX chr3 107528240 Exonic hg19 NA CB242981 Out-of-frame Intra-chr q13.12 Transcription factor q13.12 Transcription factor 111188 ChimerSeq ChiTaRs ChiTaRs SCUBE3-SCUBE3 SCUBE3 chr6 35192094 SCUBE3 chr6 35191433 Exonic hg19 NA BI868521 Out-of-frame Intra-chr p21.31 p21.31 111189 ChimerSeq ChiTaRs ChiTaRs ATP6V1C2-ATM ATP6V1C2 chr2 10924263 ATM chr11 108172187 Exonic hg19 NA BF329241 Out-of-frame Inter-chr p25.1 q22.3 Atypical:PIKK Oncogene Tumor suppressor gene 111190 ChimerSeq ChiTaRs ChiTaRs TULP4-GNB2L1 TULP4 chr6 158750509 GNB2L1 chr5 180663929 Exonic hg19 NA BC073781 Out-of-frame Inter-chr q25.3 Tumor suppressor gene 111191 ChimerSeq ChiTaRs ChiTaRs CCNG1-CCNG1 CCNG1 chr5 162871197 CCNG1 chr5 162871191 Exonic hg19 NA AA856921 Out-of-frame Intra-chr q34 q34 111192 ChimerSeq ChiTaRs ChiTaRs INPP5F-INPP5F INPP5F chr10 121587897 INPP5F chr10 121578849 Exonic hg19 NA BP229571 Out-of-frame Intra-chr q26.11 q26.11 111193 ChimerSeq ChiTaRs ChiTaRs SRSF11-SRSF11 SRSF11 chr1 70715730 SRSF11 chr1 70716046 Exonic hg19 NA BU678621 Out-of-frame Intra-chr p31.1 p31.1 111194 ChimerSeq ChiTaRs ChiTaRs TATDN3-LARP4 TATDN3 chr1 212989497 LARP4 chr12 50833868 Exonic hg19 NA AI733351 Out-of-frame Inter-chr q32.3 q13.12 111195 ChimerSeq ChiTaRs ChiTaRs NEK6-TPM4 NEK6 chr9 127113711 TPM4 chr19 16199174 Exonic hg19 NA BF878471 Out-of-frame Inter-chr q33.3 Other:NEK p13.12 111196 ChimerSeq ChiTaRs ChiTaRs NDFIP1-SIK3 NDFIP1 chr5 141532334 SIK3 chr11 116967467 Exonic hg19 NA AI743411 Out-of-frame Inter-chr q31.3 q23.3 111197 ChimerSeq ChiTaRs ChiTaRs ZNF275-ZNF275 ZNF275 chrX 152617445 ZNF275 chrX 152617460 Exonic hg19 NA AA132881 Out-of-frame Intra-chr q28 Transcription factor q28 Transcription factor 111198 ChimerSeq ChiTaRs ChiTaRs PDCD6-ZNF605 PDCD6 chr5 315089 ZNF605 chr12 133511642 Exonic hg19 NA CF528651 3'UTR-CDS Inter-chr p15.33 q24.33 Transcription factor 111199 ChimerSeq ChiTaRs ChiTaRs FMNL2-TCF12 FMNL2 chr2 153464137 TCF12 chr15 57566786 Exonic hg19 NA AW837551 Out-of-frame Inter-chr q23.3 q21.3 Oncogene Transcription factor 111200 ChimerSeq ChiTaRs ChiTaRs TBRG4-NEMF TBRG4 chr7 45151294 NEMF chr14 50050297 Exonic hg19 NA BU532331 Out-of-frame Inter-chr p13 q21.3 111201 ChimerSeq ChiTaRs ChiTaRs FTX-ARL17A FTX chrX 73351005 ARL17A chr17 640805 Exonic hg19 NA AW578921 Out-of-frame Inter-chr q13.2 q21.31 111202 ChimerSeq ChiTaRs ChiTaRs DNAH12-WHSC1 DNAH12 chr3 57409962 WHSC1 chr4 1902351 Exonic hg19 NA DN999429 Out-of-frame Inter-chr p14.3 Oncogene 111203 ChimerSeq ChiTaRs ChiTaRs IGFBP7-IGFBP7 IGFBP7 chr4 57976548 IGFBP7 chr4 57898610 Exonic hg19 NA CF126241 Out-of-frame Intra-chr q12 Tumor suppressor gene q12 Tumor suppressor gene 111204 ChimerSeq ChiTaRs ChiTaRs AKAP7-AKAP7 AKAP7 chr6 131582062 AKAP7 chr6 131577931 Exonic hg19 NA CV333231 Out-of-frame Intra-chr q23.2 q23.2 111205 ChimerSeq ChiTaRs ChiTaRs CSNK1A1-ZBTB5 CSNK1A1 chr5 148930954 ZBTB5 chr9 37441050 Exonic hg19 NA DA461511 Out-of-frame Inter-chr q32 Tumor suppressor gene p13.2 Transcription factor 111206 ChimerSeq ChiTaRs ChiTaRs DAPK1-RBM5 DAPK1 chr9 90163342 RBM5 chr3 50144946 Exonic hg19 NA BI049651 Out-of-frame Inter-chr q21.33 CAMK:DAPK Tumor suppressor gene p21.31 Tumor suppressor gene 111207 ChimerSeq ChiTaRs ChiTaRs ZNF35-ZNF35 ZNF35 chr3 44699040 ZNF35 chr3 44697743 Exonic hg19 NA BF846631 Out-of-frame Intra-chr Transcription factor Transcription factor 111208 ChimerSeq ChiTaRs ChiTaRs FAM160A1-FAM160A1 FAM160A1 chr4 152365059 FAM160A1 chr4 152364569 Exonic hg19 NA BF913771 Out-of-frame Intra-chr q31.3 q31.3 111209 ChimerSeq ChiTaRs ChiTaRs GPR107-GPR107 GPR107 chr9 132898445 GPR107 chr9 132898073 Exonic hg19 NA AA367701 Out-of-frame Intra-chr q34.11 q34.11 111210 ChimerSeq ChiTaRs ChiTaRs CIZ1-COL3A1 CIZ1 chr9 130928420 COL3A1 chr2 189856217 Exonic hg19 NA BQ182491 Out-of-frame Inter-chr q34.11 Tumor suppressor gene q32.2 111211 ChimerSeq ChiTaRs ChiTaRs STEAP3-SORL1 STEAP3 chr2 120022745 SORL1 chr11 121489549 Exonic hg19 NA BG315521 Out-of-frame Inter-chr q14.2 q24.1 111212 ChimerSeq ChiTaRs ChiTaRs KIAA1462-KIAA1462 KIAA1462 chr10 30302066 KIAA1462 chr10 30302135 Exonic hg19 NA BM990771 Out-of-frame Intra-chr p11.23 p11.23 111213 ChimerSeq ChiTaRs ChiTaRs RFC2-HSP90AA1 RFC2 chr7 73652999 HSP90AA1 chr14 102551034 Exonic hg19 NA CV353071 Out-of-frame Inter-chr q11.23 q32.31 Oncogene 111214 ChimerSeq ChiTaRs ChiTaRs FAM92A1-CPSF2 FAM92A1 chr8 94731719 CPSF2 chr14 92629517 Exonic hg19 NA BE891031 Out-of-frame Inter-chr q32.12 111215 ChimerSeq ChiTaRs ChiTaRs DLG1-DLG1 DLG1 chr3 196769903 DLG1 chr3 196769453 Exonic hg19 NA AA226281 Out-of-frame Intra-chr q29 Tumor suppressor gene q29 Tumor suppressor gene 111216 ChimerSeq ChiTaRs ChiTaRs HERC4-GNB2L1 HERC4 chr10 69812116 GNB2L1 chr5 180663976 Exonic hg19 NA BF816401 Out-of-frame Inter-chr q21.3 Tumor suppressor gene 111217 ChimerSeq ChiTaRs ChiTaRs NBPF14-ANKRD10 NBPF14 chr1 145112445 ANKRD10 chr13 111548772 Exonic hg19 NA AW860861 Out-of-frame Inter-chr q21.2 q34 111218 ChimerSeq ChiTaRs ChiTaRs LRRC2-LRRC2 LRRC2 chr3 46614700 LRRC2 chr3 46589227 Exonic hg19 NA AW811821 Out-of-frame Intra-chr p21.31 p21.31 111219 ChimerSeq ChiTaRs ChiTaRs IKZF5-ELN IKZF5 chr10 124754242 ELN chr7 73484056 Exonic hg19 NA AJ708711 Out-of-frame Inter-chr q26.13 Transcription factor q11.23 111220 ChimerSeq ChiTaRs ChiTaRs TM4SF1-BAI3 TM4SF1 chr3 149086877 BAI3 chr6 69539099 Exonic hg19 NA DA569951 Out-of-frame Inter-chr q25.1 111221 ChimerSeq ChiTaRs ChiTaRs EPHA1-EPHA1 EPHA1 chr7 143090895 EPHA1 chr7 143091340 Exonic hg19 NA BG987081 Out-of-frame Intra-chr q35 Tumor suppressor gene q35 Tumor suppressor gene 111222 ChimerSeq ChiTaRs ChiTaRs GCNT2-TOP2B GCNT2 chr6 10555159 TOP2B chr3 25679027 Exonic hg19 NA BE061671 Out-of-frame Inter-chr p24.3 p24.2 111223 ChimerSeq ChiTaRs ChiTaRs FABP4-SEMA3C FABP4 chr8 82391672 SEMA3C chr7 80371856 Exonic hg19 NA BG290021 Out-of-frame Inter-chr q21.13 q21.11 111224 ChimerSeq ChiTaRs ChiTaRs CSTF2-CSTF2 CSTF2 chrX 100095924 CSTF2 chrX 100093304 Exonic hg19 NA AA653671 Out-of-frame Intra-chr q22.1 q22.1 111225 ChimerSeq ChiTaRs ChiTaRs SIDT1-HBS1L SIDT1 chr3 113307676 HBS1L chr6 135314899 Exonic hg19 NA CB051421 Out-of-frame Inter-chr q13.2 q23.3 111226 ChimerSeq ChiTaRs ChiTaRs ALAS2-ALB ALAS2 chrX 55039953 ALB chr4 74285286 Exonic hg19 NA AI207561 Out-of-frame Inter-chr p11.21 q13.3 111227 ChimerSeq ChiTaRs ChiTaRs NFIB-NFIB NFIB chr9 14088295 NFIB chr9 14120569 Exonic hg19 NA AW383911 Out-of-frame Intra-chr p22.3 Transcription factor p22.3 Transcription factor 111228 ChimerSeq ChiTaRs ChiTaRs UNC5D-TMOD2 UNC5D chr8 35646537 TMOD2 chr15 52107588 Exonic hg19 NA BE699391 Out-of-frame Inter-chr p12 Tumor suppressor gene q21.2 111229 ChimerSeq ChiTaRs ChiTaRs FANCG-FANCG FANCG chr9 35078230 FANCG chr9 35078674 Exonic hg19 NA BQ224571 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene p13.3 Oncogene Tumor suppressor gene 111230 ChimerSeq ChiTaRs ChiTaRs ARHGAP26-ARHGAP26 ARHGAP26 chr5 142435646 ARHGAP26 chr5 142513548 Exonic hg19 NA BQ339731 Out-of-frame Intra-chr q31.3 q31.3 111231 ChimerSeq ChiTaRs ChiTaRs IAH1-IAH1 IAH1 chr2 9628924 IAH1 chr2 9628712 Exonic hg19 NA BG035981 Out-of-frame Intra-chr p25.1 p25.1 111232 ChimerSeq ChiTaRs ChiTaRs LDB3-CDC5L LDB3 chr10 88495287 CDC5L chr6 44417857 Exonic hg19 NA BM014881 Out-of-frame Inter-chr q23.2 p21.1 Transcription factor 111233 ChimerSeq ChiTaRs ChiTaRs TGFBR2-TGFBR2 TGFBR2 chr3 30665359 TGFBR2 chr3 30663049 Exonic hg19 NA BQ883621 Out-of-frame Intra-chr p24.1 Oncogene Tumor suppressor gene p24.1 Oncogene Tumor suppressor gene 111234 ChimerSeq ChiTaRs ChiTaRs GNB1-FANK1 GNB1 chr1 1717201 FANK1 chr10 127605008 Exonic hg19 NA AA603331 Out-of-frame Inter-chr p36.33 q26.2 111235 ChimerSeq ChiTaRs ChiTaRs RALGPS2-RALGPS2 RALGPS2 chr1 178820317 RALGPS2 chr1 178820111 Exonic hg19 NA BE162771 Out-of-frame Intra-chr q25.2 q25.2 111236 ChimerSeq ChiTaRs ChiTaRs MIR548F1-SPG21 MIR548F1 chr1 186316592 SPG21 chr15 65279604 Exonic hg19 NA BF884941 Out-of-frame Inter-chr q21.1 q22.31 111237 ChimerSeq ChiTaRs ChiTaRs CCDC93-IFT20 CCDC93 chr2 118688675 IFT20 chr17 26657459 Exonic hg19 NA BF800491 Out-of-frame Inter-chr q14.1 q11.2 111238 ChimerSeq ChiTaRs ChiTaRs HPRT1-PRH1-PRR4 HPRT1 chrX 133634600 PRH1-PRR4 chr12 11069957 Exonic hg19 NA AW889771 Out-of-frame Inter-chr q26.2 111239 ChimerSeq ChiTaRs ChiTaRs C1orf151-NBL1-RBCK1 C1orf151-NBL1 chr1 19984945 RBCK1 chr20 400753 Exonic hg19 NA BE221041 Out-of-frame Inter-chr p13 111240 ChimerSeq ChiTaRs ChiTaRs PSRC1-PSRC1 PSRC1 chr1 109823114 PSRC1 chr1 109824466 Exonic hg19 NA BP217061 Out-of-frame Intra-chr p13.3 p13.3 111241 ChimerSeq ChiTaRs ChiTaRs ARRDC3-ACSL4 ARRDC3 chr5 90678709 ACSL4 chrX 108970700 Exonic hg19 NA AI133031 Out-of-frame Inter-chr q14.3 q23 111242 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-INS-IGF2 INS-IGF2 chr11 2153891 INS-IGF2 chr11 2153342 Exonic hg19 NA H47601 Out-of-frame Intra-chr p15.5 p15.5 Oncogene 111243 ChimerSeq ChiTaRs ChiTaRs JTB-JTB JTB chr1 153947248 JTB chr1 153949539 Exonic hg19 NA AA748731 Out-of-frame Intra-chr q21.3 q21.3 111244 ChimerSeq ChiTaRs ChiTaRs ATP1A1-ATP1A1 ATP1A1 chr1 116944241 ATP1A1 chr1 116936185 Exonic hg19 NA BE837611 Out-of-frame Intra-chr p13.1 p13.1 111245 ChimerSeq ChiTaRs ChiTaRs PTPRN2-SSBP3 PTPRN2 chr7 158264706 SSBP3 chr1 54813540 Exonic hg19 NA T05771 Out-of-frame Inter-chr q36.3 p32.3 111246 ChimerSeq ChiTaRs ChiTaRs ARPC2-ARPC2 ARPC2 chr2 219118849 ARPC2 chr2 219118679 Exonic hg19 NA CB242231 Out-of-frame Intra-chr q35 q35 111247 ChimerSeq ChiTaRs ChiTaRs FRMD4B-NUP88 FRMD4B chr3 69268499 NUP88 chr17 5319873 Exonic hg19 NA DA165761 Out-of-frame Inter-chr p14.1 p13.2 111248 ChimerSeq ChiTaRs ChiTaRs CYC1-TRBV20-1 CYC1 chr8 145152428 TRBV20-1 chr16 2012062 Exonic hg19 NA BC011661 Out-of-frame Inter-chr q24.3 111249 ChimerSeq ChiTaRs ChiTaRs COL6A3-BBC3 COL6A3 chr2 238243503 BBC3 chr19 47733043 Exonic hg19 NA BF739081 Out-of-frame Inter-chr q37.3 q13.32 Tumor suppressor gene 111250 ChimerSeq ChiTaRs ChiTaRs SFPQ-ITGB7 SFPQ chr1 35658746 ITGB7 chr12 53585689 Exonic hg19 NA BM149731 Out-of-frame Inter-chr p34.3 q13.13 111251 ChimerSeq ChiTaRs ChiTaRs CALN1-IFNAR1 CALN1 chr7 71633851 IFNAR1 chr21 34728281 Exonic hg19 NA BE005671 Out-of-frame Inter-chr q11.22 q22.11 111252 ChimerSeq ChiTaRs ChiTaRs LARP1B-LARP1B LARP1B chr4 129028346 LARP1B chr4 129097085 Exonic hg19 NA AW450661 Out-of-frame Intra-chr q28.2 q28.2 111253 ChimerSeq ChiTaRs ChiTaRs PNLIP-PNLIP PNLIP chr10 118318768 PNLIP chr10 118318753 Exonic hg19 NA W52671 Out-of-frame Intra-chr q25.3 q25.3 111254 ChimerSeq ChiTaRs ChiTaRs GTF2E2-GTF2E2 GTF2E2 chr8 30469976 GTF2E2 chr8 30436215 Exonic hg19 NA BG024711 Out-of-frame Intra-chr p12 p12 111255 ChimerSeq ChiTaRs ChiTaRs CPB1-CPB1 CPB1 chr3 148562318 CPB1 chr3 148545598 Exonic hg19 NA BP325131 Out-of-frame Intra-chr q24 q24 111256 ChimerSeq ChiTaRs ChiTaRs TACSTD2-TACSTD2 TACSTD2 chr1 59041386 TACSTD2 chr1 59041206 Exonic hg19 NA AA938491 Out-of-frame Intra-chr p32.1 p32.1 111257 ChimerSeq ChiTaRs ChiTaRs SBDSP1-MCM7 SBDSP1 chr7 72300363 MCM7 chr7 99690406 Exonic hg19 NA BU539161 Out-of-frame Intra-chr q11.23 q22.1 111258 ChimerSeq ChiTaRs ChiTaRs GTDC1-GTDC1 GTDC1 chr2 144809356 GTDC1 chr2 144808970 Exonic hg19 NA AA572671 Out-of-frame Intra-chr q22.3 q22.3 111259 ChimerSeq ChiTaRs ChiTaRs CLSTN1-CLSTN1 CLSTN1 chr1 9795603 CLSTN1 chr1 9791302 Exonic hg19 NA BQ063711 Out-of-frame Intra-chr p36.22 p36.22 111260 ChimerSeq ChiTaRs ChiTaRs RASGEF1B-MTOR RASGEF1B chr4 82366351 MTOR chr1 11317791 Exonic hg19 NA BF845891 Out-of-frame Inter-chr q21.22 p36.22 Oncogene 111261 ChimerSeq ChiTaRs ChiTaRs RAPGEF1-ARMC2 RAPGEF1 chr9 134452236 ARMC2 chr6 109270254 Exonic hg19 NA AI572291 Out-of-frame Inter-chr q34.13 q21 111262 ChimerSeq ChiTaRs ChiTaRs CTH-CTH CTH chr1 70879919 CTH chr1 70879222 Exonic hg19 NA H72721 Out-of-frame Intra-chr p31.1 p31.1 111263 ChimerSeq ChiTaRs ChiTaRs RAB4A-RMI2 RAB4A chr1 229411087 RMI2 chr16 11369497 Exonic hg19 NA BU567991 Out-of-frame Inter-chr q42.13 p13.13 111264 ChimerSeq ChiTaRs ChiTaRs COL3A1-COL3A1 COL3A1 chr2 189876468 COL3A1 chr2 189876455 Exonic hg19 NA AW376671 Out-of-frame Intra-chr q32.2 q32.2 111265 ChimerSeq ChiTaRs ChiTaRs PRIM2-CRYAB PRIM2 chr6 57340351 CRYAB chr11 111779352 Exonic hg19 NA EB362401 Out-of-frame Inter-chr p11.2 q23.1 111266 ChimerSeq ChiTaRs ChiTaRs MFAP3L-MFAP3L MFAP3L chr4 170908746 MFAP3L chr4 170908284 Exonic hg19 NA BE073871 Out-of-frame Intra-chr q33 q33 111267 ChimerSeq ChiTaRs ChiTaRs EPB41L4A-EPB41L4A EPB41L4A chr5 111567247 EPB41L4A chr5 111560064 Exonic hg19 NA N24581 Out-of-frame Intra-chr q22.2 q22.2 111268 ChimerSeq ChiTaRs ChiTaRs TLN1-NCOR2 TLN1 chr9 35698100 NCOR2 chr12 124943923 Exonic hg19 NA BF093171 Out-of-frame Inter-chr p13.3 q24.31 111269 ChimerSeq ChiTaRs ChiTaRs TRIM2-RASA3 TRIM2 chr4 154197103 RASA3 chr13 114874390 Exonic hg19 NA AW291691 Out-of-frame Inter-chr q31.3 111270 ChimerSeq ChiTaRs ChiTaRs ARID4B-ARID4B ARID4B chr1 235442197 ARID4B chr1 235441911 Exonic hg19 NA BF379291 Out-of-frame Intra-chr q42.3 q42.3 111271 ChimerSeq ChiTaRs ChiTaRs SNHG3-LRBA SNHG3 chr1 28834673 LRBA chr4 151242465 Exonic hg19 NA DA643621 Out-of-frame Inter-chr p35.3 q31.3 111272 ChimerSeq ChiTaRs ChiTaRs GPR156-GPR156 GPR156 chr3 119963126 GPR156 chr3 119900147 Exonic hg19 NA CD638211 Out-of-frame Intra-chr q13.33 q13.33 111273 ChimerSeq ChiTaRs ChiTaRs PPIE-PPIE PPIE chr1 40219784 PPIE chr1 40214654 Exonic hg19 NA AU117291 Out-of-frame Intra-chr p34.2 p34.2 111274 ChimerSeq ChiTaRs ChiTaRs CD14-CD14 CD14 chr5 140012807 CD14 chr5 140012517 Exonic hg19 NA DA986581 Out-of-frame Intra-chr q31.3 q31.3 111275 ChimerSeq ChiTaRs ChiTaRs DMD-DMD DMD chrX 31284997 DMD chrX 31138754 Exonic hg19 NA BE179781 Out-of-frame Intra-chr p21.1 Tumor suppressor gene p21.1 Tumor suppressor gene 111276 ChimerSeq ChiTaRs ChiTaRs USP11-DYNC2H1 USP11 chrX 47107358 DYNC2H1 chr11 103336082 Exonic hg19 NA CA312751 Out-of-frame Inter-chr p11.3 q22.3 111277 ChimerSeq ChiTaRs ChiTaRs SLC44A1-KDM2A SLC44A1 chr9 108132461 KDM2A chr11 67025031 Exonic hg19 NA BX504871 Out-of-frame Inter-chr q31.1 q13.2 Transcription factor 111278 ChimerSeq ChiTaRs ChiTaRs UBP1-RBM42 UBP1 chr3 33471956 RBM42 chr19 36128537 Exonic hg19 NA BX473841 Out-of-frame Inter-chr p22.3 Transcription factor q13.12 111279 ChimerSeq ChiTaRs ChiTaRs TRIM43-UBE2L3 TRIM43 chr2 96257962 UBE2L3 chr22 21976957 Exonic hg19 NA BM810591 Out-of-frame Inter-chr q11.1 q11.21 111280 ChimerSeq ChiTaRs ChiTaRs HLA-DOA-HLA-DOA HLA-DOA chr6 4453711 HLA-DOA chr6 4418837 Exonic hg19 NA BF926221 Out-of-frame Intra-chr 111281 ChimerSeq ChiTaRs ChiTaRs RAPGEF5-EDEM1 RAPGEF5 chr7 22352252 EDEM1 chr3 5241903 Exonic hg19 NA R93121 Out-of-frame Inter-chr p15.3 p26.1 111282 ChimerSeq ChiTaRs ChiTaRs HIST1H2BK-FAM134C HIST1H2BK chr6 27114634 FAM134C chr17 40761668 Exonic hg19 NA DA664421 Out-of-frame Inter-chr p22.1 111283 ChimerSeq ChiTaRs ChiTaRs PARD3-PARD3 PARD3 chr10 34884001 PARD3 chr10 34884011 Exonic hg19 NA CV355801 Out-of-frame Intra-chr p11.21 p11.21 111284 ChimerSeq ChiTaRs ChiTaRs FLNB-FLNB FLNB chr3 58157540 FLNB chr3 58157605 Exonic hg19 NA AW842251 Out-of-frame Intra-chr p14.3 p14.3 111285 ChimerSeq ChiTaRs ChiTaRs SNX9-SNX9 SNX9 chr6 158327207 SNX9 chr6 158327179 Exonic hg19 NA CN263471 Out-of-frame Intra-chr q25.3 q25.3 111286 ChimerSeq ChiTaRs ChiTaRs ADCY2-DZIP1L ADCY2 chr1 152009468 DZIP1L chr3 137813181 Exonic hg19 NA BG338501 Out-of-frame Inter-chr p15.31 q22.3 111287 ChimerSeq ChiTaRs ChiTaRs TXLNA-TXLNA TXLNA chr1 32663412 TXLNA chr1 32646087 Exonic hg19 NA BU194071 Out-of-frame Intra-chr p35.2 p35.2 111288 ChimerSeq ChiTaRs ChiTaRs CANX-CANX CANX chr5 179147449 CANX chr5 179156065 Exonic hg19 NA CB856751 Out-of-frame Intra-chr 111289 ChimerSeq ChiTaRs ChiTaRs PUM1-GPR97 PUM1 chr1 31462179 GPR97 chr16 57722837 Exonic hg19 NA AF111851 Out-of-frame Inter-chr p35.2 111290 ChimerSeq ChiTaRs ChiTaRs C9orf3-COPS7A C9orf3 chr9 97795563 COPS7A chr12 6837092 Exonic hg19 NA AA210971 Out-of-frame Inter-chr q22.32 p13.31 111291 ChimerSeq ChiTaRs ChiTaRs C9orf78-SRSF11 C9orf78 chr9 132590057 SRSF11 chr1 70714571 Exonic hg19 NA AA934021 Out-of-frame Inter-chr q34.11 p31.1 111292 ChimerSeq ChiTaRs ChiTaRs HNRNPU-EMG1 HNRNPU chr1 245019348 EMG1 chr12 7086335 Exonic hg19 NA AA367421 Out-of-frame Inter-chr q44 p13.31 111293 ChimerSeq ChiTaRs ChiTaRs TRAF6-TRAF6 TRAF6 chr11 36505549 TRAF6 chr11 36505319 Exonic hg19 NA AW022791 Out-of-frame Intra-chr p12 p12 111294 ChimerSeq ChiTaRs ChiTaRs MAP3K13-MALAT1 MAP3K13 chr3 185083448 MALAT1 chr11 65267759 Exonic hg19 NA AI248811 Out-of-frame Inter-chr q27.2 q13.1 111295 ChimerSeq ChiTaRs ChiTaRs ANKRD32-ANKRD32 ANKRD32 chr5 93979056 ANKRD32 chr5 93988985 Exonic hg19 NA BG944051 Out-of-frame Intra-chr 111296 ChimerSeq ChiTaRs ChiTaRs AKAP9-CDK14 AKAP9 chr7 91570462 CDK14 chr7 90741855 Exonic hg19 NA DA807731 Out-of-frame Intra-chr q21.2 Oncogene q21.13 Seq+ 111297 ChimerSeq ChiTaRs ChiTaRs XXYLT1-FARP1 XXYLT1 chr3 194930625 FARP1 chr13 98879492 Exonic hg19 NA AK024181 Out-of-frame Inter-chr q29 q32.2 111298 ChimerSeq ChiTaRs ChiTaRs LPP-SSU72 LPP chr3 188064351 SSU72 chr1 1490940 Exonic hg19 NA BG011761 Out-of-frame Inter-chr q27.3 Oncogene p36.33 111299 ChimerSeq ChiTaRs ChiTaRs TNFSF4-LOC728190 TNFSF4 chr1 173174671 LOC728190 chr10 89000906 Exonic hg19 NA AK056011 Out-of-frame Inter-chr q25.1 111300 ChimerSeq ChiTaRs ChiTaRs SPCS3-P2RX7 SPCS3 chr4 177253247 P2RX7 chr12 121624117 Exonic hg19 NA AI332621 Out-of-frame Inter-chr q34.2 q24.31 111301 ChimerSeq ChiTaRs ChiTaRs BMPR1B-MRPL39 BMPR1B chr4 95958790 MRPL39 chr21 26960826 Exonic hg19 NA BG990101 Out-of-frame Inter-chr q22.3 TKL:STKR q21.3 111302 ChimerSeq ChiTaRs ChiTaRs SEC61A2-SEC61A2 SEC61A2 chr10 12208431 SEC61A2 chr10 12207842 Exonic hg19 NA BE618201 Out-of-frame Intra-chr p14 p14 111303 ChimerSeq ChiTaRs ChiTaRs MAGI1-SPRY4 MAGI1 chr3 65718046 SPRY4 chr5 141690809 Exonic hg19 NA BF990231 Out-of-frame Inter-chr Oncogene q31.3 Tumor suppressor gene 111304 ChimerSeq ChiTaRs ChiTaRs LRRC61-PTPN13 LRRC61 chr7 150035245 PTPN13 chr4 87612505 Exonic hg19 NA BU676031 3'UTR-CDS Inter-chr q36.1 q21.3 Tumor suppressor gene 111305 ChimerSeq ChiTaRs ChiTaRs RMND5A-TRA2B RMND5A chr2 87208265 TRA2B chr3 185641620 Exonic hg19 NA BE767041 Out-of-frame Inter-chr p11.2 q27.2 111306 ChimerSeq ChiTaRs ChiTaRs PDZRN3-PDZRN3 PDZRN3 chr3 73624744 PDZRN3 chr3 73624508 Exonic hg19 NA AW841091 Out-of-frame Intra-chr p13 p13 111307 ChimerSeq ChiTaRs ChiTaRs SEC31A-MEMO1 SEC31A chr4 83821677 MEMO1 chr2 32094983 Exonic hg19 NA BF751621 Out-of-frame Inter-chr q21.22 p22.3 111308 ChimerSeq ChiTaRs ChiTaRs FAM98A-ZCCHC17 FAM98A chr2 33809286 ZCCHC17 chr1 31836885 Exonic hg19 NA BQ776211 Out-of-frame Inter-chr p22.3 p35.2 111309 ChimerSeq ChiTaRs ChiTaRs ASAH1-ASAH1 ASAH1 chr8 17914091 ASAH1 chr8 17914076 Exonic hg19 NA AA501801 Out-of-frame Intra-chr p22 p22 111310 ChimerSeq ChiTaRs ChiTaRs ANKHD1-ANKHD1 ANKHD1 chr5 139903776 ANKHD1 chr5 139864767 Exonic hg19 NA CD642571 Out-of-frame Intra-chr q31.3 q31.3 111311 ChimerSeq ChiTaRs ChiTaRs PIGR-SERP2 PIGR chr1 207110465 SERP2 chr13 44964630 Exonic hg19 NA BE697361 Out-of-frame Inter-chr q32.1 q14.11 111312 ChimerSeq ChiTaRs ChiTaRs COPS5-HNRNPH3 COPS5 chr8 67971652 HNRNPH3 chr10 70101750 Exonic hg19 NA BE176861 Out-of-frame Inter-chr q13.1 q21.3 111313 ChimerSeq ChiTaRs ChiTaRs ALB-VPS13B ALB chr4 74279288 VPS13B chr8 100222381 Exonic hg19 NA W86731 Out-of-frame Inter-chr q13.3 q22.2 111314 ChimerSeq ChiTaRs ChiTaRs SMG7-HNRNPF SMG7 chr1 183457540 HNRNPF chr10 43885934 Exonic hg19 NA BF872191 Out-of-frame Inter-chr q25.3 q11.21 111315 ChimerSeq ChiTaRs ChiTaRs SPINK1-SPINK1 SPINK1 chr5 147210841 SPINK1 chr5 147210564 Exonic hg19 NA D82311 Out-of-frame Intra-chr q32 q32 111316 ChimerSeq ChiTaRs ChiTaRs HLA-DRB5-HLA-DRB5 HLA-DRB5 chr6 32485269 HLA-DRB5 chr6 32485324 Exonic hg19 NA BU676711 Out-of-frame Intra-chr p21.32 p21.32 111317 ChimerSeq ChiTaRs ChiTaRs PPP1R18-PPP1R18 PPP1R18 chr6 2156350 PPP1R18 chr6 1976608 Exonic hg19 NA BM983871 Out-of-frame Intra-chr p21.33 p21.33 111318 ChimerSeq ChiTaRs ChiTaRs TGFBR2-EFCAB11 TGFBR2 chr3 30734996 EFCAB11 chr14 90341491 Exonic hg19 NA BG991791 Out-of-frame Inter-chr p24.1 Oncogene Tumor suppressor gene q32.11 111319 ChimerSeq ChiTaRs ChiTaRs MAP4-MAP4 MAP4 chr3 47894694 MAP4 chr3 47893881 Exonic hg19 NA BG325391 Out-of-frame Intra-chr p21.31 p21.31 111320 ChimerSeq ChiTaRs ChiTaRs S100A8-S100A8 S100A8 chr1 153362682 S100A8 chr1 153362678 Exonic hg19 NA BU678791 Out-of-frame Intra-chr q21.3 q21.3 111321 ChimerSeq ChiTaRs ChiTaRs TXNIP-TXNIP TXNIP chr1 145441360 TXNIP chr1 145440718 Exonic hg19 NA BF847181 Out-of-frame Intra-chr q21.1 Tumor suppressor gene q21.1 Tumor suppressor gene 111322 ChimerSeq ChiTaRs ChiTaRs NOTCH2-CD59 NOTCH2 chr1 120454663 CD59 chr11 33731155 Exonic hg19 NA BP305371 Out-of-frame Inter-chr p12 Oncogene Tumor suppressor gene p13 111323 ChimerSeq ChiTaRs ChiTaRs SEPT11-SEPT11 2011_ 9_ 1_ chr4 77917992 2011_ 9_ 1_ chr4 77908847 Exonic hg19 NA AW273741 Out-of-frame Intra-chr 111324 ChimerSeq ChiTaRs ChiTaRs EPCAM-GNB1 EPCAM chr2 47601569 GNB1 chr1 1718252 Exonic hg19 NA BF806121 Out-of-frame Inter-chr p21 p36.33 111325 ChimerSeq ChiTaRs ChiTaRs SELT-EIF4G2 SELT chr3 150344949 EIF4G2 chr11 10818757 Exonic hg19 NA BE084601 Out-of-frame Inter-chr p15.4 111326 ChimerSeq ChiTaRs ChiTaRs SHISA4-SHISA4 SHISA4 chr1 201859716 SHISA4 chr1 201860536 Exonic hg19 NA BM921941 Out-of-frame Intra-chr q32.1 q32.1 111327 ChimerSeq ChiTaRs ChiTaRs BRE-EHMT1 BRE chr2 28455873 EHMT1 chr9 140641906 Exonic hg19 NA BI467031 Out-of-frame Inter-chr q34.3 111328 ChimerSeq ChiTaRs ChiTaRs SORBS1-SORBS1 SORBS1 chr10 97117003 SORBS1 chr10 97130026 Exonic hg19 NA AB020701 Out-of-frame Intra-chr q24.1 q24.1 111329 ChimerSeq ChiTaRs ChiTaRs GKAP1-MECP2 GKAP1 chr9 86382697 MECP2 chrX 153321732 Exonic hg19 NA AF361491 Out-of-frame Inter-chr q21.32 q28 Transcription factor 111330 ChimerSeq ChiTaRs ChiTaRs DOCK11-MLL DOCK11 chrX 117683475 MLL chr11 118358291 Exonic hg19 NA AY246172 Out-of-frame Inter-chr q24 q23.3 111331 ChimerSeq ChiTaRs ChiTaRs EEF1A1-SEC14L1 EEF1A1 chr6 74229098 SEC14L1 chr17 75208135 Exonic hg19 NA BF802691 Out-of-frame Inter-chr q13 Tumor suppressor gene q25.2 111332 ChimerSeq ChiTaRs ChiTaRs MFN2-MFN2 MFN2 chr1 12071793 MFN2 chr1 12069686 Exonic hg19 NA BF834721 Out-of-frame Intra-chr p36.22 p36.22 111333 ChimerSeq ChiTaRs ChiTaRs SH3KBP1-ZKSCAN1 SH3KBP1 chrX 19599014 ZKSCAN1 chr7 99632844 Exonic hg19 NA BQ321721 Out-of-frame Inter-chr p22.12 q22.1 Transcription factor 111334 ChimerSeq ChiTaRs ChiTaRs SERINC5-CERK SERINC5 chr5 79534327 CERK chr22 47080753 Exonic hg19 NA BF807731 Out-of-frame Inter-chr q14.1 q13.31 111335 ChimerSeq ChiTaRs ChiTaRs PTPDC1-PTPDC1 PTPDC1 chr9 96845598 PTPDC1 chr9 96844474 Exonic hg19 NA AW993491 Out-of-frame Intra-chr q22.32 q22.32 111336 ChimerSeq ChiTaRs ChiTaRs CTBP1-CTBP1 CTBP1 chr4 1236831 CTBP1 chr4 1236767 Exonic hg19 NA AW890211 Out-of-frame Intra-chr p16.3 p16.3 111337 ChimerSeq ChiTaRs ChiTaRs CWC22-THBS1 CWC22 chr2 180864979 THBS1 chr15 39875819 Exonic hg19 NA BG189851 Out-of-frame Inter-chr q31.3 q14 Oncogene Tumor suppressor gene 111338 ChimerSeq ChiTaRs ChiTaRs ASH1L-RPL32 ASH1L chr1 155315156 RPL32 chr3 12877548 Exonic hg19 NA AA837061 Out-of-frame Inter-chr q22 Transcription factor p25.2 111339 ChimerSeq ChiTaRs ChiTaRs MYOF-MYO10 MYOF chr10 95113869 MYO10 chr5 16776325 Exonic hg19 NA BE003191 Out-of-frame Inter-chr q23.33 p15.1 111340 ChimerSeq ChiTaRs ChiTaRs GPX3-GPX3 GPX3 chr5 150408090 GPX3 chr5 150408072 Exonic hg19 NA BG896291 Out-of-frame Intra-chr q33.1 Tumor suppressor gene q33.1 Tumor suppressor gene 111341 ChimerSeq ChiTaRs ChiTaRs PGRMC1-PGRMC1 PGRMC1 chrX 118377554 PGRMC1 chrX 118377538 Exonic hg19 NA BI497441 Out-of-frame Intra-chr q24 q24 111342 ChimerSeq ChiTaRs ChiTaRs GLYATL2-GLYATL2 GLYATL2 chr11 58601640 GLYATL2 chr11 58601829 Exonic hg19 NA CA311201 Out-of-frame Intra-chr q12.1 q12.1 111343 ChimerSeq ChiTaRs ChiTaRs DDX21-BEX2 DDX21 chr10 70742645 BEX2 chrX 102564404 Exonic hg19 NA AW379411 Out-of-frame Inter-chr q22.1 q22.2 Tumor suppressor gene 111344 ChimerSeq ChiTaRs ChiTaRs NFIA-PIK3R1 NFIA chr1 61821979 PIK3R1 chr5 67593366 Exonic hg19 NA BX648791 Out-of-frame Inter-chr p31.3 Transcription factor q13.1 Oncogene 111345 ChimerSeq ChiTaRs ChiTaRs CRIM1-RAPGEF5 CRIM1 chr2 36750511 RAPGEF5 chr7 22364653 Exonic hg19 NA BF841281 Out-of-frame Inter-chr p22.2 p15.3 111346 ChimerSeq ChiTaRs ChiTaRs FLNA-MGLL FLNA chrX 153581464 MGLL chr3 127411024 Exonic hg19 NA BF819641 Out-of-frame Inter-chr q28 Tumor suppressor gene q21.3 111347 ChimerSeq ChiTaRs ChiTaRs ARPC1A-KIF1A ARPC1A chr7 98988839 KIF1A chr2 241710782 Exonic hg19 NA BI016011 Out-of-frame Inter-chr q22.1 q37.3 111348 ChimerSeq ChiTaRs ChiTaRs GOPC-GOPC GOPC chr6 117881568 GOPC chr6 117881570 Exonic hg19 NA AW168891 Out-of-frame Intra-chr q22.1 q22.1 111349 ChimerSeq ChiTaRs ChiTaRs IQSEC1-IQSEC1 IQSEC1 chr3 12941666 IQSEC1 chr3 12941883 Exonic hg19 NA AW503951 Out-of-frame Intra-chr p25.2 p25.2 111350 ChimerSeq ChiTaRs ChiTaRs ATG7-ATG7 ATG7 chr3 11597636 ATG7 chr3 11597649 Exonic hg19 NA BU607761 Out-of-frame Intra-chr p25.3 p25.3 111351 ChimerSeq ChiTaRs ChiTaRs TLK1-CNTN4 TLK1 chr2 172027373 CNTN4 chr3 2484393 Exonic hg19 NA H72151 Out-of-frame Inter-chr q31.1 Other:TLK p26.3 111352 ChimerSeq ChiTaRs ChiTaRs MAP4-PARP2 MAP4 chr3 47893054 PARP2 chr14 20812397 Exonic hg19 NA BE708561 Out-of-frame Inter-chr p21.31 q11.2 111353 ChimerSeq ChiTaRs ChiTaRs UBR5-BAZ2A UBR5 chr8 103299793 BAZ2A chr12 56990345 Exonic hg19 NA AA368181 Out-of-frame Inter-chr q22.3 Oncogene q13.3 Transcription factor 111354 ChimerSeq ChiTaRs ChiTaRs HNRNPH1-EFHC1 HNRNPH1 chr5 179046292 EFHC1 chr6 52367020 Exonic hg19 NA AU140711 Out-of-frame Inter-chr q35.3 p12.2 111355 ChimerSeq ChiTaRs ChiTaRs STAT1-PPP3R1 STAT1 chr2 191866819 PPP3R1 chr2 68432111 Exonic hg19 NA BF379791 Out-of-frame Intra-chr q32.2 Tumor suppressor gene Transcription factor p14 111356 ChimerSeq ChiTaRs ChiTaRs MASP1-TNS4 MASP1 chr3 186999695 TNS4 chr17 38647374 Exonic hg19 NA CV413001 Out-of-frame Inter-chr q27.3 q21.2 111357 ChimerSeq ChiTaRs ChiTaRs POLN-POLN POLN chr4 2160562 POLN chr4 2160553 Exonic hg19 NA CV389611 Out-of-frame Intra-chr p16.3 p16.3 111358 ChimerSeq ChiTaRs ChiTaRs WHSC1L1-TTC3 WHSC1L1 chr8 38154187 TTC3 chr21 38456601 Exonic hg19 NA BI034861 Out-of-frame Inter-chr p11.23 Tumor suppressor gene q22.13 111359 ChimerSeq ChiTaRs ChiTaRs GSN-GSN GSN chr9 124094861 GSN chr9 124091230 Exonic hg19 NA AA715501 Out-of-frame Intra-chr q33.2 Tumor suppressor gene q33.2 Tumor suppressor gene 111360 ChimerSeq ChiTaRs ChiTaRs HSPA12A-HSPA12A HSPA12A chr10 118431276 HSPA12A chr10 118431046 Exonic hg19 NA AA826311 Out-of-frame Intra-chr q25.3 q25.3 111361 ChimerSeq ChiTaRs ChiTaRs CEP57L1-CEP57L1 CEP57L1 chr6 109439138 CEP57L1 chr6 109439403 Exonic hg19 NA CV382081 Out-of-frame Intra-chr q21 q21 111362 ChimerSeq ChiTaRs ChiTaRs DAPK1-GRIA3 DAPK1 chr9 90117893 GRIA3 chrX 122437395 Exonic hg19 NA BF994061 Out-of-frame Inter-chr q21.33 CAMK:DAPK Tumor suppressor gene q25 111363 ChimerSeq ChiTaRs ChiTaRs PRKDC-SLC38A2 PRKDC chr8 48715136 SLC38A2 chr12 46751974 Exonic hg19 NA BU587911 Out-of-frame Inter-chr q11.21 Oncogene q13.11 111364 ChimerSeq ChiTaRs ChiTaRs PRKAR2B-RNF121 PRKAR2B chr7 106729633 RNF121 chr11 71664187 Exonic hg19 NA GW493216 Out-of-frame Inter-chr q13.4 111365 ChimerSeq ChiTaRs ChiTaRs RIC8A-AGGF1 RIC8A chr11 214377 AGGF1 chr5 76360175 Exonic hg19 NA H52961 Out-of-frame Inter-chr p15.5 q13.3 111366 ChimerSeq ChiTaRs ChiTaRs BZW2-KIF13A BZW2 chr7 16746144 KIF13A chr6 17965364 Exonic hg19 NA T07391 Out-of-frame Inter-chr p21.1 p22.3 111367 ChimerSeq ChiTaRs ChiTaRs AUTS2-RAB11FIP4 AUTS2 chr7 69912562 RAB11FIP4 chr17 29852137 Exonic hg19 NA AW818431 Out-of-frame Inter-chr q11.22 q11.2 111368 ChimerSeq ChiTaRs ChiTaRs PSMD2-TTC39C PSMD2 chr3 184018227 TTC39C chr18 21619719 Exonic hg19 NA BE002761 Out-of-frame Inter-chr q27.1 q11.2 111369 ChimerSeq ChiTaRs ChiTaRs MARVELD2-TRIM5 MARVELD2 chr5 68715996 TRIM5 chr11 5719691 Exonic hg19 NA AW379451 Out-of-frame Inter-chr q13.2 p15.4 111370 ChimerSeq ChiTaRs ChiTaRs HLA-E-APOLD1 HLA-E chr6 1793644 APOLD1 chr12 12944025 Exonic hg19 NA BP398261 Out-of-frame Inter-chr p13.1 111371 ChimerSeq ChiTaRs ChiTaRs SEMA4D-SEMA4D SEMA4D chr9 91993639 SEMA4D chr9 91993873 Exonic hg19 NA BE938931 Out-of-frame Intra-chr q22.2 q22.2 111372 ChimerSeq ChiTaRs ChiTaRs WBP5-DHRS7B WBP5 chrX 102612572 DHRS7B chr17 21072564 Exonic hg19 NA CA432861 Out-of-frame Inter-chr p11.2 111373 ChimerSeq ChiTaRs ChiTaRs REPS1-REPS1 REPS1 chr6 139228934 REPS1 chr6 139228506 Exonic hg19 NA BU674501 Out-of-frame Intra-chr q24.1 q24.1 111374 ChimerSeq ChiTaRs ChiTaRs TTF1-TTF1 TTF1 chr9 135277088 TTF1 chr9 135278104 Exonic hg19 NA BP207641 Out-of-frame Intra-chr q34.13 Tumor suppressor gene Transcription factor q34.13 Tumor suppressor gene Transcription factor 111375 ChimerSeq ChiTaRs ChiTaRs FAM168B-FAM168B FAM168B chr2 131843931 FAM168B chr2 131844024 Exonic hg19 NA BE177741 Out-of-frame Intra-chr q21.1 q21.1 111376 ChimerSeq ChiTaRs ChiTaRs ZNF326-SNTB2 ZNF326 chr1 90467418 SNTB2 chr16 69239384 Exonic hg19 NA BF355751 Out-of-frame Inter-chr p22.2 Transcription factor 111377 ChimerSeq ChiTaRs ChiTaRs LOX-LOC642852 LOX chr5 121413594 LOC642852 chr21 46714614 Exonic hg19 NA AI453061 Out-of-frame Inter-chr q23.1 Tumor suppressor gene 111378 ChimerSeq ChiTaRs ChiTaRs RPL32-CA12 RPL32 chr3 12877654 CA12 chr15 63617526 Exonic hg19 NA AI343531 Out-of-frame Inter-chr p25.2 q22.2 111379 ChimerSeq ChiTaRs ChiTaRs DLC1-DLC1 DLC1 chr8 13356639 DLC1 chr8 13251070 Exonic hg19 NA T78001 Out-of-frame Intra-chr p22 Tumor suppressor gene p22 Tumor suppressor gene 111380 ChimerSeq ChiTaRs ChiTaRs RAB7A-LRRC47 RAB7A chr3 128487686 LRRC47 chr1 3696892 Exonic hg19 NA BF337771 Out-of-frame Inter-chr q21.3 Tumor suppressor gene p36.32 111381 ChimerSeq ChiTaRs ChiTaRs MAN1A1-MAN1A1 MAN1A1 chr6 119500651 MAN1A1 chr6 119500228 Exonic hg19 NA AA828041 Out-of-frame Intra-chr q22.31 q22.31 111382 ChimerSeq ChiTaRs ChiTaRs UBE2A-DGUOK UBE2A chrX 118715161 DGUOK chr2 74177042 Exonic hg19 NA BF926421 Out-of-frame Inter-chr q24 p13.1 111383 ChimerSeq ChiTaRs ChiTaRs FNDC5-FNDC5 FNDC5 chr1 33329179 FNDC5 chr1 33330333 Exonic hg19 NA AV722831 Out-of-frame Intra-chr p35.1 p35.1 111384 ChimerSeq ChiTaRs ChiTaRs FAM107A-SRD5A2 FAM107A chr3 58551622 SRD5A2 chr2 31800576 Exonic hg19 NA D44731 Out-of-frame Inter-chr p14.2 p23.1 111385 ChimerSeq ChiTaRs ChiTaRs TNC-TNC TNC chr9 117786418 TNC chr9 117788909 Exonic hg19 NA BF770941 Out-of-frame Intra-chr q33.1 q33.1 111386 ChimerSeq ChiTaRs ChiTaRs CMTM6-EPHB4 CMTM6 chr3 32523472 EPHB4 chr7 100400632 Exonic hg19 NA AW579301 Out-of-frame Inter-chr p22.3 q22.1 Oncogene Tumor suppressor gene 111387 ChimerSeq ChiTaRs ChiTaRs CYP4B1-NEDD4L CYP4B1 chr1 47283841 NEDD4L chr18 55959332 Exonic hg19 NA BG990991 Out-of-frame Inter-chr p33 q21.31 Tumor suppressor gene 111388 ChimerSeq ChiTaRs ChiTaRs FASTKD2-NVL FASTKD2 chr2 207630683 NVL chr1 224500069 Exonic hg19 NA DA378651 Out-of-frame Inter-chr q33.3 q42.11 111389 ChimerSeq ChiTaRs ChiTaRs EPC2-RANBP3L EPC2 chr2 149414011 RANBP3L chr5 36254096 Exonic hg19 NA CB409291 Out-of-frame Inter-chr q23.1 p13.2 111390 ChimerSeq ChiTaRs ChiTaRs FOXP1-SMC1A FOXP1 chr3 71454241 SMC1A chrX 53441484 Exonic hg19 NA BF897241 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor p11.22 111391 ChimerSeq ChiTaRs ChiTaRs CLU-CLU CLU chr8 27455687 CLU chr8 27455678 Exonic hg19 NA AW516531 Out-of-frame Intra-chr p21.1 Tumor suppressor gene p21.1 Tumor suppressor gene 111392 ChimerSeq ChiTaRs ChiTaRs ANKIB1-PSAT1 ANKIB1 chr7 91887137 PSAT1 chr9 80938475 Exonic hg19 NA AA328351 Out-of-frame Inter-chr q21.2 q21.2 111393 ChimerSeq ChiTaRs ChiTaRs CCDC73-SEMA4G CCDC73 chr11 32802254 SEMA4G chr10 102741133 Exonic hg19 NA BQ012806 Out-of-frame Inter-chr p13 q24.31 111394 ChimerSeq ChiTaRs ChiTaRs SEC62-SEC62 SEC62 chr3 169713376 SEC62 chr3 169713378 Exonic hg19 NA BE763851 Out-of-frame Intra-chr q26.2 q26.2 111395 ChimerSeq ChiTaRs ChiTaRs GSK3B-NCALD GSK3B chr3 119542625 NCALD chr8 102699349 Exonic hg19 NA BG014481 Out-of-frame Inter-chr q13.33 CMGC:GSK Tumor suppressor gene q22.3 111396 ChimerSeq ChiTaRs ChiTaRs SSR3-CPEB4 SSR3 chr3 156259268 CPEB4 chr5 173384876 Exonic hg19 NA AI973221 Out-of-frame Inter-chr q25.31 q35.2 111397 ChimerSeq ChiTaRs ChiTaRs MRPL35-MLLT6 MRPL35 chr2 86440102 MLLT6 chr17 36872913 Exonic hg19 NA BQ359421 Out-of-frame Inter-chr p11.2 q12 111398 ChimerSeq ChiTaRs ChiTaRs NPAS2-KIAA0319L NPAS2 chr2 101487005 KIAA0319L chr1 35944604 Exonic hg19 NA CR991271 Out-of-frame Inter-chr q11.2 Tumor suppressor gene Transcription factor p34.3 111399 ChimerSeq ChiTaRs ChiTaRs PARD3-TRAPPC8 PARD3 chr10 34770569 TRAPPC8 chr18 29501791 Exonic hg19 NA AW934791 Out-of-frame Inter-chr p11.21 q12.1 111400 ChimerSeq ChiTaRs ChiTaRs IARS-IARS IARS chr9 95017687 IARS chr9 95016986 Exonic hg19 NA AI916151 Out-of-frame Intra-chr q22.31 q22.31 111401 ChimerSeq ChiTaRs ChiTaRs RSU1-RNF10 RSU1 chr10 16859404 RNF10 chr12 120998642 Exonic hg19 NA DA951661 Out-of-frame Inter-chr p13 q24.31 111402 ChimerSeq ChiTaRs ChiTaRs TACC1-TACC1 TACC1 chr8 38710546 TACC1 chr8 38709900 Exonic hg19 NA BU615361 3'UTR-3'UTR Intra-chr p11.22 p11.22 111403 ChimerSeq ChiTaRs ChiTaRs ASB3-MTF1 ASB3 chr2 54007425 MTF1 chr1 38277851 Exonic hg19 NA BF379811 Out-of-frame Inter-chr p16.2 p34.3 Transcription factor 111404 ChimerSeq ChiTaRs ChiTaRs CLIC4-RPS25 CLIC4 chr1 25167568 RPS25 chr11 118888071 Exonic hg19 NA BQ721711 3'UTR-CDS Inter-chr p36.11 111405 ChimerSeq ChiTaRs ChiTaRs IFT80-TP73 IFT80 chr3 160126797 TP73 chr1 3579510 Exonic hg19 NA CR740291 Out-of-frame Inter-chr q25.33 p36.32 Tumor suppressor gene Transcription factor 111406 ChimerSeq ChiTaRs ChiTaRs HLA-F-AS1-TSC1 HLA-F-AS1 chr6 1053885 TSC1 chr9 135804247 Exonic hg19 NA BF738281 Out-of-frame Inter-chr q34.13 111407 ChimerSeq ChiTaRs ChiTaRs AHCYL1-LRRC58 AHCYL1 chr1 110564963 LRRC58 chr3 120047152 Exonic hg19 NA DA647181 Out-of-frame Inter-chr p13.3 Tumor suppressor gene q13.33 111408 ChimerSeq ChiTaRs ChiTaRs HNRNPH1-PIK3IP1 HNRNPH1 chr5 179046315 PIK3IP1 chr22 31678260 Exonic hg19 NA BF987131 Out-of-frame Inter-chr q35.3 q12.2 111409 ChimerSeq ChiTaRs ChiTaRs PUSL1-ACAP3 PUSL1 chr1 1245317 ACAP3 chr1 1244615 Exonic hg19 NA AK027721 Out-of-frame Intra-chr p36.33 p36.33 111410 ChimerSeq ChiTaRs ChiTaRs LEPROT-LEPROT LEPROT chr1 65898336 LEPROT chr1 65886319 Exonic hg19 NA CB140261 Out-of-frame Intra-chr p31.3 p31.3 111411 ChimerSeq ChiTaRs ChiTaRs MFSD2A-MFSD2A MFSD2A chr1 40433513 MFSD2A chr1 40434005 Exonic hg19 NA BF995041 In-Frame Intra-chr p34.2 Tumor suppressor gene p34.2 Tumor suppressor gene 111412 ChimerSeq ChiTaRs ChiTaRs SMYD3-SMYD3 SMYD3 chr1 246479639 SMYD3 chr1 246480643 Exonic hg19 NA BP419481 Out-of-frame Intra-chr q44 Transcription factor q44 Transcription factor 111413 ChimerSeq ChiTaRs ChiTaRs ASRGL1-ASTN1 ASRGL1 chr11 62160887 ASTN1 chr1 176848695 Exonic hg19 NA AI990291 3'UTR-CDS Inter-chr q12.3 q25.2 111414 ChimerSeq ChiTaRs ChiTaRs RCOR3-FRMPD1 RCOR3 chr1 211486319 FRMPD1 chr9 37741487 Exonic hg19 NA BF091851 Out-of-frame Inter-chr q32.2 p13.2 111415 ChimerSeq ChiTaRs ChiTaRs FNDC3B-FNDC3B FNDC3B chr3 171920935 FNDC3B chr3 171920903 Exonic hg19 NA CV351051 Out-of-frame Intra-chr q26.31 q26.31 111416 ChimerSeq ChiTaRs ChiTaRs TCF7L2-KIAA0391 TCF7L2 chr10 114856766 KIAA0391 chr14 35716870 Exonic hg19 NA AW853851 Out-of-frame Inter-chr q25.2 Oncogene Tumor suppressor gene Transcription factor q13.2 111417 ChimerSeq ChiTaRs ChiTaRs C10orf11-SPG7 C10orf11 chr10 77793741 SPG7 chr16 89623312 Exonic hg19 NA BE817691 Out-of-frame Inter-chr q24.3 111418 ChimerSeq ChiTaRs ChiTaRs JAZF1-SRSF6 JAZF1 chr7 28005722 SRSF6 chr20 42091048 Exonic hg19 NA AK123171 Out-of-frame Inter-chr p15.1 Transcription factor q13.11 111419 ChimerSeq ChiTaRs ChiTaRs PABPC1-PABPC1 PABPC1 chr8 101719216 PABPC1 chr8 101721361 Exonic hg19 NA BF087781 Out-of-frame Intra-chr q22.3 q22.3 111420 ChimerSeq ChiTaRs ChiTaRs PFKFB3-ERCC1 PFKFB3 chr10 6276796 ERCC1 chr19 45978380 Exonic hg19 NA BG926621 Out-of-frame Inter-chr p15.1 q13.32 Oncogene 111421 ChimerSeq ChiTaRs ChiTaRs FOXO3-FOXN3 FOXO3 chr6 108941819 FOXN3 chr14 89622534 Exonic hg19 NA AK123151 Out-of-frame Inter-chr q21 Oncogene Tumor suppressor gene Transcription factor q32.11 Transcription factor 111422 ChimerSeq ChiTaRs ChiTaRs MAPK14-MAPK14 MAPK14 chr6 36075323 MAPK14 chr6 36075319 Exonic hg19 NA BF183021 Out-of-frame Intra-chr p21.31 p21.31 111423 ChimerSeq ChiTaRs ChiTaRs COX20-COX20 COX20 chr1 245006608 COX20 chr1 245006571 Exonic hg19 NA AA837631 Out-of-frame Intra-chr q44 q44 111424 ChimerSeq ChiTaRs ChiTaRs ATP8A1-ATP8A1 ATP8A1 chr4 42424196 ATP8A1 chr4 42422050 Exonic hg19 NA AA740981 Out-of-frame Intra-chr p13 p13 111425 ChimerSeq ChiTaRs ChiTaRs PCCB-PCCB PCCB chr3 136051830 PCCB chr3 136051900 Exonic hg19 NA BM873521 Out-of-frame Intra-chr q22.3 q22.3 111426 ChimerSeq ChiTaRs ChiTaRs ABL1-RNF220 ABL1 chr9 133680495 RNF220 chr1 44937055 Exonic hg19 NA H71251 Out-of-frame Inter-chr q34.12 TK:Abl Oncogene p34.1 111427 ChimerSeq ChiTaRs ChiTaRs PDCD6-PDCD6 PDCD6 chr5 315088 PDCD6 chr5 314775 Exonic hg19 NA BU608571 Out-of-frame Intra-chr p15.33 p15.33 111428 ChimerSeq ChiTaRs ChiTaRs CCNY-CCNY CCNY chr10 35705629 CCNY chr10 35741851 Exonic hg19 NA AW856961 Out-of-frame Intra-chr p11.21 p11.21 111429 ChimerSeq ChiTaRs ChiTaRs COPG1-COPG1 COPG1 chr3 128984567 COPG1 chr3 128984558 Exonic hg19 NA BQ316921 Out-of-frame Intra-chr q21.3 q21.3 111430 ChimerSeq ChiTaRs ChiTaRs UBL4B-NOP56 UBL4B chr1 110655501 NOP56 chr20 2635553 Exonic hg19 NA DB044831 Out-of-frame Inter-chr p13.3 p13 111431 ChimerSeq ChiTaRs ChiTaRs NUP153-NUP153 NUP153 chr6 17626071 NUP153 chr6 17648038 Exonic hg19 NA BP352751 Out-of-frame Intra-chr p22.3 p22.3 111432 ChimerSeq ChiTaRs ChiTaRs TCP1-GMDS TCP1 chr6 160201533 GMDS chr6 1698518 Exonic hg19 NA AW375751 Out-of-frame Intra-chr q25.3 p25.3 111433 ChimerSeq ChiTaRs ChiTaRs TNF-TNF TNF chr6 2875798 TNF chr6 2875262 Exonic hg19 NA AI880081 Out-of-frame Intra-chr 111434 ChimerSeq ChiTaRs ChiTaRs LOC200772-C1orf115 LOC200772 chr2 241905219 C1orf115 chr1 220865265 Exonic hg19 NA EG327971 Out-of-frame Inter-chr q41 111435 ChimerSeq ChiTaRs ChiTaRs ANKUB1-ATXN2 ANKUB1 chr3 149510368 ATXN2 chr12 111956142 Exonic hg19 NA DB215951 Out-of-frame Inter-chr q25.1 q24.12 111436 ChimerSeq ChiTaRs ChiTaRs RUNX3-ZNF682 RUNX3 chr1 25453977 ZNF682 chr19 20133540 Exonic hg19 NA AW868551 Out-of-frame Inter-chr p36.11 Tumor suppressor gene Transcription factor p12 Transcription factor 111437 ChimerSeq ChiTaRs ChiTaRs HBG1-RBP4 HBG1 chr11 5275680 RBP4 chr10 95351593 Exonic hg19 NA AI207681 Out-of-frame Inter-chr p15.4 q23.33 111438 ChimerSeq ChiTaRs ChiTaRs IDS-PUM2 IDS chrX 148560598 PUM2 chr2 20493460 Exonic hg19 NA BF059161 Out-of-frame Inter-chr q28 p24.1 111439 ChimerSeq ChiTaRs ChiTaRs SYNE1-ZBTB4 SYNE1 chr6 152456360 ZBTB4 chr17 7363431 Exonic hg19 NA BM725571 Out-of-frame Inter-chr q25.2 Oncogene Tumor suppressor gene Transcription factor 111440 ChimerSeq ChiTaRs ChiTaRs CDK6-CDK6 CDK6 chr7 92236558 CDK6 chr7 92235971 Exonic hg19 NA BE895751 Out-of-frame Intra-chr q21.2 CMGC:CDK Oncogene Tumor suppressor gene q21.2 CMGC:CDK Oncogene Tumor suppressor gene 111441 ChimerSeq ChiTaRs ChiTaRs TFE3-CYP11A1 TFE3 chrX 48891263 CYP11A1 chr15 74637560 Exonic hg19 NA AA368421 Out-of-frame Inter-chr p11.23 Oncogene Transcription factor q24.1 111442 ChimerSeq ChiTaRs ChiTaRs TXNIP-CERS6 TXNIP chr1 145440935 CERS6 chr2 169629012 Exonic hg19 NA AW601881 Out-of-frame Inter-chr q21.1 Tumor suppressor gene q24.3 111443 ChimerSeq ChiTaRs ChiTaRs ZNF697-ZNF697 ZNF697 chr1 120189406 ZNF697 chr1 120188837 Exonic hg19 NA BG958411 Out-of-frame Intra-chr p12 Transcription factor p12 Transcription factor 111444 ChimerSeq ChiTaRs ChiTaRs CSTA-EPC2 CSTA chr3 122060458 EPC2 chr2 149528937 Exonic hg19 NA BE716971 Out-of-frame Inter-chr q21.1 q23.1 111445 ChimerSeq ChiTaRs ChiTaRs TANC1-VSIG10 TANC1 chr2 159916786 VSIG10 chr12 118513453 Exonic hg19 NA BF845241 Out-of-frame Inter-chr q24.2 q24.23 111446 ChimerSeq ChiTaRs ChiTaRs SPTBN1-NADSYN1 SPTBN1 chr2 54876980 NADSYN1 chr11 71208614 Exonic hg19 NA BI047811 Out-of-frame Inter-chr p16.2 Tumor suppressor gene q13.4 111447 ChimerSeq ChiTaRs ChiTaRs ABHD6-ABHD6 ABHD6 chr3 58270857 ABHD6 chr3 58252993 Exonic hg19 NA W26811 Out-of-frame Intra-chr p14.3 p14.3 111448 ChimerSeq ChiTaRs ChiTaRs ZNF438-ZNF438 ZNF438 chr10 31197944 ZNF438 chr10 31165927 Exonic hg19 NA AW893511 5'UTR-5'UTR Intra-chr p11.23 Transcription factor p11.23 Transcription factor 111449 ChimerSeq ChiTaRs ChiTaRs METTL8-RALGAPA2 METTL8 chr2 172175057 RALGAPA2 chr20 20425016 Exonic hg19 NA BQ314021 Out-of-frame Inter-chr q31.1 p11.23 111450 ChimerSeq ChiTaRs ChiTaRs PSD3-GNGT1 PSD3 chr8 18441366 GNGT1 chr7 93346824 Exonic hg19 NA X93851 Out-of-frame Inter-chr p22 q21.3 111451 ChimerSeq ChiTaRs ChiTaRs SND1-MYOG SND1 chr7 127569372 MYOG chr1 203054688 Exonic hg19 NA BF309401 Out-of-frame Inter-chr q32.1 q32.1 Transcription factor 111452 ChimerSeq ChiTaRs ChiTaRs EGR1-EGR1 EGR1 chr5 137804114 EGR1 chr5 137803720 Exonic hg19 NA AA809191 Out-of-frame Intra-chr q31.2 Tumor suppressor gene Transcription factor q31.2 Tumor suppressor gene Transcription factor 111453 ChimerSeq ChiTaRs ChiTaRs UBA3-UBA3 UBA3 chr3 69127203 UBA3 chr3 69113219 Exonic hg19 NA AW590921 Out-of-frame Intra-chr p14.1 p14.1 111454 ChimerSeq ChiTaRs ChiTaRs DMD-LPP DMD chrX 31139800 LPP chr3 188302347 Exonic hg19 NA H27701 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q27.3 Oncogene 111455 ChimerSeq ChiTaRs ChiTaRs SCARB2-ESRP2 SCARB2 chr4 77097656 ESRP2 chr16 68265554 Exonic hg19 NA BQ308261 Out-of-frame Inter-chr q21.1 q22.1 111456 ChimerSeq ChiTaRs ChiTaRs HMBOX1-MALAT1 HMBOX1 chr8 28907550 MALAT1 chr11 65270340 Exonic hg19 NA BY800411 Out-of-frame Inter-chr p21.1 Transcription factor q13.1 111457 ChimerSeq ChiTaRs ChiTaRs TSEN2-TSEN2 TSEN2 chr3 12551635 TSEN2 chr3 12565281 Exonic hg19 NA CV398941 Out-of-frame Intra-chr p25.2 p25.2 111458 ChimerSeq ChiTaRs ChiTaRs PLSCR1-PLSCR1 PLSCR1 chr3 146233135 PLSCR1 chr3 146232967 Exonic hg19 NA BU156701 Out-of-frame Intra-chr q24 Transcription factor q24 Transcription factor 111459 ChimerSeq ChiTaRs ChiTaRs SMO-CAMK1D SMO chr7 128850907 CAMK1D chr10 12522086 Exonic hg19 NA BF876881 Out-of-frame Inter-chr q32.1 Oncogene p13 111460 ChimerSeq ChiTaRs ChiTaRs ASTN2-ASTN2 ASTN2 chr9 119187807 ASTN2 chr9 119187507 Exonic hg19 NA BM796551 Out-of-frame Intra-chr q33.1 q33.1 111461 ChimerSeq ChiTaRs ChiTaRs ORC2-ORC2 ORC2 chr2 201806002 ORC2 chr2 201807422 Exonic hg19 NA BI027991 3'UTR-CDS Intra-chr q33.1 q33.1 111462 ChimerSeq ChiTaRs ChiTaRs PEX7-PEX7 PEX7 chr6 137180879 PEX7 chr6 137176704 Exonic hg19 NA BQ640052 Out-of-frame Intra-chr q23.3 q23.3 111463 ChimerSeq ChiTaRs ChiTaRs LY75-CD302-LY75-CD302 LY75-CD302 chr2 160660193 LY75-CD302 chr2 160660199 Exonic hg19 NA BM979852 Out-of-frame Intra-chr q24.2 q24.2 111464 ChimerSeq ChiTaRs ChiTaRs ALB-TF ALB chr4 74286942 TF chr3 133497528 Exonic hg19 NA AI065112 Out-of-frame Inter-chr q13.3 q22.1 111465 ChimerSeq ChiTaRs ChiTaRs CD55-CD34 CD55 chr1 207510163 CD34 chr1 208060978 Exonic hg19 NA BF849652 CDS-3'UTR Intra-chr q32.2 q32.2 111466 ChimerSeq ChiTaRs ChiTaRs FLNB-FLNB FLNB chr3 58113364 FLNB chr3 58113396 Exonic hg19 NA BG987842 Out-of-frame Intra-chr p14.3 p14.3 111467 ChimerSeq ChiTaRs ChiTaRs CCDC152-DGKI CCDC152 chr5 42800425 DGKI chr7 137390839 Exonic hg19 NA AA665202 Out-of-frame Inter-chr p12 q33 111468 ChimerSeq ChiTaRs ChiTaRs NDUFB9-FLJ43315 NDUFB9 chr8 125565050 FLJ43315 chr? 53168 Exonic hg19 NA AF036272 Out-of-frame Inter-chr q24.13 111469 ChimerSeq ChiTaRs ChiTaRs SRPK2-C16orf70 SRPK2 chr7 104914747 C16orf70 chr16 67151299 Exonic hg19 NA BE066992 Out-of-frame Inter-chr q22.3 CMGC:SRPK q22.1 111470 ChimerSeq ChiTaRs ChiTaRs PIAS3-C12orf45 PIAS3 chr1 145586546 C12orf45 chr12 105388298 Exonic hg19 NA BU608702 3'UTR-CDS Inter-chr q21.1 q23.3 111471 ChimerSeq ChiTaRs ChiTaRs ANKRD17-ANKRD17 ANKRD17 chr4 74115326 ANKRD17 chr4 74098733 Exonic hg19 NA BU753672 Out-of-frame Intra-chr q13.3 q13.3 111472 ChimerSeq ChiTaRs ChiTaRs HDGF-ANKRD40 HDGF chr1 156714050 ANKRD40 chr17 48772724 Exonic hg19 NA BG980322 Out-of-frame Inter-chr q23.1 q21.33 111473 ChimerSeq ChiTaRs ChiTaRs RNF145-RNF145 RNF145 chr5 158613641 RNF145 chr5 158613665 Exonic hg19 NA BF333692 Out-of-frame Intra-chr q33.3 q33.3 111474 ChimerSeq ChiTaRs ChiTaRs FGA-PIK3IP1 FGA chr4 155506812 PIK3IP1 chr22 31678626 Exonic hg19 NA AI110732 Out-of-frame Inter-chr q31.3 q12.2 111475 ChimerSeq ChiTaRs ChiTaRs TMCC1-TMCC1 TMCC1 chr3 129367667 TMCC1 chr3 129367625 Exonic hg19 NA CA314382 Out-of-frame Intra-chr q22.1 q22.1 111476 ChimerSeq ChiTaRs ChiTaRs KCNIP1-SLC44A2 KCNIP1 chr5 170050965 SLC44A2 chr19 10754082 Exonic hg19 NA BF376932 Out-of-frame Inter-chr q35.1 p13.2 111477 ChimerSeq ChiTaRs ChiTaRs CD74-CD74 CD74 chr5 149781554 CD74 chr5 149781208 Exonic hg19 NA AA593162 Out-of-frame Intra-chr q33.1 q33.1 111478 ChimerSeq ChiTaRs ChiTaRs STAG1-STAG1 STAG1 chr3 136120978 STAG1 chr3 136121527 Exonic hg19 NA AA320662 Out-of-frame Intra-chr q22.3 q22.3 111479 ChimerSeq ChiTaRs ChiTaRs NUP214-AGGF1 NUP214 chr9 134106129 AGGF1 chr5 76359022 Exonic hg19 NA BF082622 Out-of-frame Inter-chr q34.13 Oncogene q13.3 111480 ChimerSeq ChiTaRs ChiTaRs ECE1-ECE1 ECE1 chr1 21554711 ECE1 chr1 21554454 Exonic hg19 NA CV397322 Out-of-frame Intra-chr p36.12 p36.12 111481 ChimerSeq ChiTaRs ChiTaRs SRFBP1-SRFBP1 SRFBP1 chr5 121363418 SRFBP1 chr5 121363381 Exonic hg19 NA BG387962 Out-of-frame Intra-chr q23.1 q23.1 111482 ChimerSeq ChiTaRs ChiTaRs SLC20A2-CYB5A SLC20A2 chr8 42274318 CYB5A chr18 71920536 Exonic hg19 NA AI110592 Out-of-frame Inter-chr p11.21 q22.3 Tumor suppressor gene 111483 ChimerSeq ChiTaRs ChiTaRs SEC24B-SEC24B SEC24B chr4 110450882 SEC24B chr4 110449940 Exonic hg19 NA AV715572 Out-of-frame Intra-chr q25 q25 111484 ChimerSeq ChiTaRs ChiTaRs OXSR1-DAXX OXSR1 chr3 38294368 DAXX chr6 4760123 Exonic hg19 NA BG114042 Out-of-frame Inter-chr p22.2 Oncogene 111485 ChimerSeq ChiTaRs ChiTaRs DDX46-DDX46 DDX46 chr5 134131770 DDX46 chr5 134131768 Exonic hg19 NA BI006802 Out-of-frame Intra-chr q31.1 q31.1 111486 ChimerSeq ChiTaRs ChiTaRs DST-PSMD2 DST chr6 56373505 PSMD2 chr3 184023571 Exonic hg19 NA BF081412 Out-of-frame Inter-chr p12.1 Oncogene q27.1 111487 ChimerSeq ChiTaRs ChiTaRs IGFBP5-IGFBP5 IGFBP5 chr2 217538906 IGFBP5 chr2 217538427 Exonic hg19 NA DA074132 Out-of-frame Intra-chr q35 Tumor suppressor gene q35 Tumor suppressor gene 111488 ChimerSeq ChiTaRs ChiTaRs CLASP1-ST8SIA4 CLASP1 chr2 122229057 ST8SIA4 chr5 100206203 Exonic hg19 NA AK074622 Out-of-frame Inter-chr q14.3 q21.1 111489 ChimerSeq ChiTaRs ChiTaRs XPO1-XPO1 XPO1 chr2 61715746 XPO1 chr2 61709608 Exonic hg19 NA BG259252 Out-of-frame Intra-chr p15 Oncogene p15 Oncogene 111490 ChimerSeq ChiTaRs ChiTaRs LRRFIP1-KIAA0319L LRRFIP1 chr2 238676847 KIAA0319L chr1 35905166 Exonic hg19 NA AW851952 Out-of-frame Inter-chr q37.3 p34.3 111491 ChimerSeq ChiTaRs ChiTaRs RANBP17-RANBP17 RANBP17 chr5 170695304 RANBP17 chr5 170694934 Exonic hg19 NA AA837742 Out-of-frame Intra-chr q35.1 q35.1 111492 ChimerSeq ChiTaRs ChiTaRs SLC12A2-ZC3H14 SLC12A2 chr5 127525369 ZC3H14 chr14 89078766 Exonic hg19 NA BM968312 Out-of-frame Inter-chr q23.3 q31.3 111493 ChimerSeq ChiTaRs ChiTaRs CYP4X1-CYP4X1 CYP4X1 chr1 47516423 CYP4X1 chr1 47515973 Exonic hg19 NA CA313612 3'UTR-CDS Intra-chr p33 p33 111494 ChimerSeq ChiTaRs ChiTaRs PHF8-PHF8 PHF8 chrX 54022210 PHF8 chrX 54019212 Exonic hg19 NA AW796192 Out-of-frame Intra-chr p11.22 p11.22 111495 ChimerSeq ChiTaRs ChiTaRs SLC4A4-SLC4A4 SLC4A4 chr4 72332218 SLC4A4 chr4 72306404 Exonic hg19 NA BF924222 Out-of-frame Intra-chr q13.3 q13.3 111496 ChimerSeq ChiTaRs ChiTaRs CLTA-CLTA CLTA chr9 36199058 CLTA chr9 36199024 Exonic hg19 NA BE697332 Out-of-frame Intra-chr p13.3 p13.3 111497 ChimerSeq ChiTaRs ChiTaRs FARP2-GTDC1 FARP2 chr2 242382507 GTDC1 chr2 144725369 Exonic hg19 NA CV337072 Out-of-frame Intra-chr q37.3 q22.3 111498 ChimerSeq ChiTaRs ChiTaRs GPR156-GPR156 GPR156 chr3 119900209 GPR156 chr3 119912251 Exonic hg19 NA CD638212 Out-of-frame Intra-chr q13.33 q13.33 111499 ChimerSeq ChiTaRs ChiTaRs SETD5-TAOK1 SETD5 chr3 9497901 TAOK1 chr17 27733828 Exonic hg19 NA AW206562 Out-of-frame Inter-chr p25.3 q11.2 111500 ChimerSeq ChiTaRs ChiTaRs EPB41-ITM2B EPB41 chr1 29416705 ITM2B chr13 48807528 Exonic hg19 NA DA268072 Out-of-frame Inter-chr p35.3 Tumor suppressor gene q14.2 111501 ChimerSeq ChiTaRs ChiTaRs SH3GLB1-HSP90AB1 SH3GLB1 chr1 87211864 HSP90AB1 chr6 44221425 Exonic hg19 NA BG256202 Out-of-frame Inter-chr p22.3 Tumor suppressor gene p21.1 Oncogene 111502 ChimerSeq ChiTaRs ChiTaRs GATA2-H19 GATA2 chr3 128202843 H19 chr11 2018046 Exonic hg19 NA BE902392 Out-of-frame Inter-chr q21.3 Oncogene Transcription factor p15.5 Tumor suppressor gene 111503 ChimerSeq ChiTaRs ChiTaRs ZNF608-SLC9A9 ZNF608 chr5 124035130 SLC9A9 chr3 143437054 Exonic hg19 NA BG999752 Out-of-frame Inter-chr q23.2 Transcription factor q24 111504 ChimerSeq ChiTaRs ChiTaRs KPNA4-PLXNC1 KPNA4 chr3 160216778 PLXNC1 chr12 94655321 Exonic hg19 NA CV428242 Out-of-frame Inter-chr q25.33 q22 Tumor suppressor gene 111505 ChimerSeq ChiTaRs ChiTaRs TMEM207-FMR1 TMEM207 chr3 190154659 FMR1 chrX 147006630 Exonic hg19 NA BE813282 Out-of-frame Inter-chr q28 q27.3 111506 ChimerSeq ChiTaRs ChiTaRs AKR1A1-AKR1A1 AKR1A1 chr1 46034033 AKR1A1 chr1 46034458 Exonic hg19 NA BF876342 Out-of-frame Intra-chr p34.1 p34.1 111507 ChimerSeq ChiTaRs ChiTaRs LPP-LPP LPP chr3 188403327 LPP chr3 188403520 Exonic hg19 NA AA480632 Out-of-frame Intra-chr q27.3 Oncogene q27.3 Oncogene 111508 ChimerSeq ChiTaRs ChiTaRs DNAJC1-GTDC1 DNAJC1 chr10 22146632 GTDC1 chr2 144922443 Exonic hg19 NA CV315332 Out-of-frame Inter-chr p12.31 q22.3 111509 ChimerSeq ChiTaRs ChiTaRs LIPH-LIPH LIPH chr3 185252589 LIPH chr3 185236937 Exonic hg19 NA AA102322 Out-of-frame Intra-chr q27.2 q27.2 111510 ChimerSeq ChiTaRs ChiTaRs CDC42SE2-CDC42SE2 CDC42SE2 chr5 130730365 CDC42SE2 chr5 130729808 Exonic hg19 NA BU675572 Out-of-frame Intra-chr q31.1 q31.1 111511 ChimerSeq ChiTaRs ChiTaRs EHMT2-KRT18 EHMT2 chr6 3184389 KRT18 chr12 53345587 Exonic hg19 NA BF769712 Out-of-frame Inter-chr q13.13 111512 ChimerSeq ChiTaRs ChiTaRs THOC2-SEC62 THOC2 chrX 122762084 SEC62 chr3 169706028 Exonic hg19 NA AW362972 Out-of-frame Inter-chr q25 q26.2 111513 ChimerSeq ChiTaRs ChiTaRs FSTL1-FSTL1 FSTL1 chr3 120113504 FSTL1 chr3 120114016 Exonic hg19 NA BF992532 Out-of-frame Intra-chr q13.33 q13.33 111514 ChimerSeq ChiTaRs ChiTaRs MAN1A2-MAN1A2 MAN1A2 chr1 117944863 MAN1A2 chr1 117957349 Exonic hg19 NA AI768882 Out-of-frame Intra-chr p12 p12 111515 ChimerSeq ChiTaRs ChiTaRs HCLS1-NLRC5 HCLS1 chr3 121353198 NLRC5 chr16 57073729 Exonic hg19 NA BF898642 Out-of-frame Inter-chr q13.33 q13 111516 ChimerSeq ChiTaRs ChiTaRs LOC100272228-LOC100272228 LOC100272228 chrX 149130935 LOC100272228 chrX 149116267 Exonic hg19 NA BE694412 5'UTR-CDS Intra-chr 111517 ChimerSeq ChiTaRs ChiTaRs EFHC1-TMEM164 EFHC1 chr6 52366492 TMEM164 chrX 109419703 Exonic hg19 NA BC019032 Out-of-frame Inter-chr p12.2 q23 111518 ChimerSeq ChiTaRs ChiTaRs CDK14-PPP1CC CDK14 chr7 90478056 PPP1CC chr12 111171933 Exonic hg19 NA BF891152 Out-of-frame Inter-chr q21.13 q24.11 111519 ChimerSeq ChiTaRs ChiTaRs LRCH3-LRCH3 LRCH3 chr3 197526464 LRCH3 chr3 197519936 Exonic hg19 NA CK825012 Out-of-frame Intra-chr q29 q29 111520 ChimerSeq ChiTaRs ChiTaRs SDHA-NBAS SDHA chr5 238273 NBAS chr2 15647747 Exonic hg19 NA BG490462 Out-of-frame Inter-chr p15.33 Oncogene Tumor suppressor gene p24.3 111521 ChimerSeq ChiTaRs ChiTaRs DEFA1-RNF115 DEFA1 chr8 6835405 RNF115 chr1 145633536 Exonic hg19 NA AF119902 Out-of-frame Inter-chr p23.1 q21.1 111522 ChimerSeq ChiTaRs ChiTaRs UBR4-UBR4 UBR4 chr1 19437286 UBR4 chr1 19446114 Exonic hg19 NA BP355292 Out-of-frame Intra-chr p36.13 p36.13 111523 ChimerSeq ChiTaRs ChiTaRs LIPA-KIAA1432 LIPA chr10 91163397 KIAA1432 chr9 5747152 Exonic hg19 NA AW891502 Out-of-frame Inter-chr q23.31 111524 ChimerSeq ChiTaRs ChiTaRs LAMC1-LAMC1 LAMC1 chr1 183003925 LAMC1 chr1 183048096 Exonic hg19 NA AW856562 Out-of-frame Intra-chr q25.3 q25.3 111525 ChimerSeq ChiTaRs ChiTaRs ARPC2-CRTAP ARPC2 chr2 219114606 CRTAP chr3 33174070 Exonic hg19 NA AW385342 Out-of-frame Inter-chr q35 p22.3 111526 ChimerSeq ChiTaRs ChiTaRs URGCP-MRPS24-URGCP-MRPS24 URGCP-MRPS24 chr7 43917251 URGCP-MRPS24 chr7 43918429 Exonic hg19 NA AI909232 Out-of-frame Intra-chr p13 p13 111527 ChimerSeq ChiTaRs ChiTaRs PER3-PER3 PER3 chr1 7904276 PER3 chr1 7904268 Exonic hg19 NA AA862192 Out-of-frame Intra-chr p36.23 p36.23 111528 ChimerSeq ChiTaRs ChiTaRs NBPF9-NBPF14 NBPF9 chr1 144521116 NBPF14 chr1 145013719 Exonic hg19 NA BX647792 Out-of-frame Intra-chr q21.2 q21.2 111529 ChimerSeq ChiTaRs ChiTaRs CDC42BPA-PLXNA2 CDC42BPA chr1 227479003 PLXNA2 chr1 208371600 Exonic hg19 NA BF996262 Out-of-frame Intra-chr q42.13 q32.2 111530 ChimerSeq ChiTaRs ChiTaRs JAK2-JAK2 JAK2 chr9 4995992 JAK2 chr9 4998504 Exonic hg19 NA BF890982 Out-of-frame Intra-chr p24.1 TK:JakA Oncogene p24.1 TK:JakA Oncogene 111531 ChimerSeq ChiTaRs ChiTaRs GNAI3-GNAI3 GNAI3 chr1 110135363 GNAI3 chr1 110134746 Exonic hg19 NA CA307392 Out-of-frame Intra-chr p13.3 p13.3 111532 ChimerSeq ChiTaRs ChiTaRs GPX3-GPX3 GPX3 chr5 150407992 GPX3 chr5 150407030 Exonic hg19 NA BG927502 Out-of-frame Intra-chr q33.1 Tumor suppressor gene q33.1 Tumor suppressor gene 111533 ChimerSeq ChiTaRs ChiTaRs CFB-CFB CFB chr6 3251225 CFB chr6 3249926 Exonic hg19 NA AW363522 Out-of-frame Intra-chr 111534 ChimerSeq ChiTaRs ChiTaRs LOXL3-SIPA1L1 LOXL3 chr2 74765721 SIPA1L1 chr14 72190432 Exonic hg19 NA BF752032 Out-of-frame Inter-chr p13.1 q24.2 111535 ChimerSeq ChiTaRs ChiTaRs SMYD2-MAGI1 SMYD2 chr1 214462008 MAGI1 chr3 65813287 Exonic hg19 NA AW177652 Out-of-frame Inter-chr q32.3 Oncogene 111536 ChimerSeq ChiTaRs ChiTaRs SLC7A2-ETS2 SLC7A2 chr8 17395576 ETS2 chr21 40196359 Exonic hg19 NA BF086382 Out-of-frame Inter-chr p22 q22.2 Tumor suppressor gene Transcription factor 111537 ChimerSeq ChiTaRs ChiTaRs NR3C1-NR3C1 NR3C1 chr5 142660302 NR3C1 chr5 142660685 Exonic hg19 NA CB219072 Out-of-frame Intra-chr q31.3 Transcription factor q31.3 Transcription factor 111538 ChimerSeq ChiTaRs ChiTaRs GYG1-GYG1 GYG1 chr3 148745419 GYG1 chr3 148745039 Exonic hg19 NA BU677172 Out-of-frame Intra-chr q24 q24 111539 ChimerSeq ChiTaRs ChiTaRs SOX4-GRIP1 SOX4 chr6 21596512 GRIP1 chr12 66751619 Exonic hg19 NA AW139952 Out-of-frame Inter-chr p22.3 Transcription factor q14.3 111540 ChimerSeq ChiTaRs ChiTaRs PDE5A-ARGLU1 PDE5A chr4 120471408 ARGLU1 chr13 107196119 Exonic hg19 NA BG996672 Out-of-frame Inter-chr q26 q33.3 111541 ChimerSeq ChiTaRs ChiTaRs SLC35A3-SFI1 SLC35A3 chr1 100459112 SFI1 chr22 32002605 Exonic hg19 NA BI000022 Out-of-frame Inter-chr p21.2 q12.2 111542 ChimerSeq ChiTaRs ChiTaRs ZNF445-BRD2 ZNF445 chr3 44490823 BRD2 chr6 4428672 Exonic hg19 NA BE933782 Out-of-frame Inter-chr Transcription factor Atypical:BRD 111543 ChimerSeq ChiTaRs ChiTaRs CD44-COX15 CD44 chr11 35194974 COX15 chr10 101486747 Exonic hg19 NA BI038422 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene q24.2 111544 ChimerSeq ChiTaRs ChiTaRs MAGED2-MDH1 MAGED2 chrX 54837913 MDH1 chr2 63831921 Exonic hg19 NA AA092172 Out-of-frame Inter-chr p11.21 p15 111545 ChimerSeq ChiTaRs ChiTaRs ZCCHC10-TMEM56 ZCCHC10 chr5 132339336 TMEM56 chr1 95576560 Exonic hg19 NA AW362912 Out-of-frame Inter-chr q31.1 p21.3 111546 ChimerSeq ChiTaRs ChiTaRs PSMB4-IGFN1 PSMB4 chr1 151374379 IGFN1 chr1 201178364 Exonic hg19 NA BE179662 Out-of-frame Intra-chr q21.3 q32.1 111547 ChimerSeq ChiTaRs ChiTaRs RPL30-EEF1D RPL30 chr8 99057600 EEF1D chr8 144661898 Exonic hg19 NA BC008012 Out-of-frame Intra-chr q22.2 111548 ChimerSeq ChiTaRs ChiTaRs ENPEP-CEP250 ENPEP chr4 111443627 CEP250 chr20 34074907 Exonic hg19 NA CD700372 Out-of-frame Inter-chr q25 q11.22 111549 ChimerSeq ChiTaRs ChiTaRs BAZ1B-BAZ1B BAZ1B chr7 72891983 BAZ1B chr7 72884692 Exonic hg19 NA BE813822 Out-of-frame Intra-chr q11.23 q11.23 111550 ChimerSeq ChiTaRs ChiTaRs NADK2-DONSON NADK2 chr5 36193315 DONSON chr21 35198820 Exonic hg19 NA AI003822 Out-of-frame Inter-chr p13.2 q22.11 111551 ChimerSeq ChiTaRs ChiTaRs TMC1-CAST TMC1 chr9 75386533 CAST chr5 96054645 Exonic hg19 NA BF989792 Out-of-frame Inter-chr q21.13 q15 111552 ChimerSeq ChiTaRs ChiTaRs ZFAND2A-ABHD3 ZFAND2A chr7 1193724 ABHD3 chr18 19261589 Exonic hg19 NA BE074612 Out-of-frame Inter-chr p22.3 q11.2 111553 ChimerSeq ChiTaRs ChiTaRs LGR4-NEMF LGR4 chr11 27389621 NEMF chr14 50190719 Exonic hg19 NA BE148612 Out-of-frame Inter-chr p14.1 q21.3 111554 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-INS-IGF2 INS-IGF2 chr11 2154828 INS-IGF2 chr11 2154832 Exonic hg19 NA BQ368952 Out-of-frame Intra-chr p15.5 p15.5 Oncogene 111555 ChimerSeq ChiTaRs ChiTaRs SLC26A7-TDRD3 SLC26A7 chr8 92337422 TDRD3 chr13 61146439 Exonic hg19 NA AU137042 Out-of-frame Inter-chr q21.3 q21.2 111556 ChimerSeq ChiTaRs ChiTaRs RXRA-RXRA RXRA chr9 137328705 RXRA chr9 137325987 Exonic hg19 NA AW881282 Out-of-frame Intra-chr q34.2 Transcription factor q34.2 Transcription factor 111557 ChimerSeq ChiTaRs ChiTaRs NUCB2-NUCB2 NUCB2 chr11 17332512 NUCB2 chr11 17332395 Exonic hg19 NA CB853072 Out-of-frame Intra-chr p15.1 p15.1 111558 ChimerSeq ChiTaRs ChiTaRs ANKRD17-ANKRD17 ANKRD17 chr4 73968123 ANKRD17 chr4 73981539 Exonic hg19 NA BE772112 Out-of-frame Intra-chr q13.3 q13.3 111559 ChimerSeq ChiTaRs ChiTaRs TMEM33-PILRB TMEM33 chr4 41945817 PILRB chr7 99956384 Exonic hg19 NA BF733642 Out-of-frame Inter-chr p13 q22.1 111560 ChimerSeq ChiTaRs ChiTaRs DCUN1D4-DCUN1D4 DCUN1D4 chr4 52740786 DCUN1D4 chr4 52740539 Exonic hg19 NA CV341662 Out-of-frame Intra-chr q12 q12 111561 ChimerSeq ChiTaRs ChiTaRs NAALADL2-LYZ NAALADL2 chr3 175299009 LYZ chr12 69747490 Exonic hg19 NA AK126272 Out-of-frame Inter-chr q26.31 q15 111562 ChimerSeq ChiTaRs ChiTaRs SLC20A2-ZNHIT6 SLC20A2 chr8 42308736 ZNHIT6 chr1 86173743 Exonic hg19 NA BF851482 Out-of-frame Inter-chr p11.21 p22.3 111563 ChimerSeq ChiTaRs ChiTaRs CYBRD1-CYBRD1 CYBRD1 chr2 172412065 CYBRD1 chr2 172412029 Exonic hg19 NA CV572862 Out-of-frame Intra-chr q31.1 q31.1 111564 ChimerSeq ChiTaRs ChiTaRs PROSC-WDR82 PROSC chr8 37620274 WDR82 chr3 52311297 Exonic hg19 NA AI472022 Out-of-frame Inter-chr p21.2 111565 ChimerSeq ChiTaRs ChiTaRs PDIA4-FAM41C PDIA4 chr7 148725607 FAM41C chr1 809700 Exonic hg19 NA BU536122 Out-of-frame Inter-chr q36.1 p36.33 111566 ChimerSeq ChiTaRs ChiTaRs CDV3-IMPDH1 CDV3 chr3 133306914 IMPDH1 chr7 128043784 Exonic hg19 NA BG954732 Out-of-frame Inter-chr q22.1 q32.1 111567 ChimerSeq ChiTaRs ChiTaRs CLDN4-GLT8D1 CLDN4 chr7 73245883 GLT8D1 chr3 52734352 Exonic hg19 NA BF757832 Out-of-frame Inter-chr q11.23 p21.1 111568 ChimerSeq ChiTaRs ChiTaRs TSTD2-KRT4 TSTD2 chr9 100368571 KRT4 chr12 53207410 Exonic hg19 NA DA441162 Out-of-frame Inter-chr q22.33 q13.13 111569 ChimerSeq ChiTaRs ChiTaRs SQSTM1-MLL3 SQSTM1 chr5 179252206 MLL3 chr7 151879316 Exonic hg19 NA BG005352 Out-of-frame Inter-chr q35.3 Tumor suppressor gene 111570 ChimerSeq ChiTaRs ChiTaRs CLOCK-CLOCK CLOCK chr4 56299645 CLOCK chr4 56299008 Exonic hg19 NA BE883242 Out-of-frame Intra-chr q12 Transcription factor q12 Transcription factor 111571 ChimerSeq ChiTaRs ChiTaRs RPL11-RPL11 RPL11 chr1 24019217 RPL11 chr1 24019218 Exonic hg19 NA BQ310852 Out-of-frame Intra-chr p36.11 Tumor suppressor gene p36.11 Tumor suppressor gene 111572 ChimerSeq ChiTaRs ChiTaRs SLC30A9-XRCC2 SLC30A9 chr4 42089049 XRCC2 chr7 152372503 Exonic hg19 NA BI060642 Out-of-frame Inter-chr p13 q36.1 Oncogene 111573 ChimerSeq ChiTaRs ChiTaRs RPS6-MALAT1 RPS6 chr9 19379594 MALAT1 chr11 65266525 Exonic hg19 NA BF814502 Out-of-frame Inter-chr p22.1 q13.1 111574 ChimerSeq ChiTaRs ChiTaRs BIRC6-EDEM2 BIRC6 chr2 32723809 EDEM2 chr20 33865130 Exonic hg19 NA AK128432 Out-of-frame Inter-chr p22.3 q11.22 111575 ChimerSeq ChiTaRs ChiTaRs IL6R-CADPS2 IL6R chr1 154398376 CADPS2 chr7 122188225 Exonic hg19 NA BE072332 Out-of-frame Inter-chr q21.3 q31.32 111576 ChimerSeq ChiTaRs ChiTaRs EIF3M-EIF3M EIF3M chr11 32624019 EIF3M chr11 32617512 Exonic hg19 NA CA312302 Out-of-frame Intra-chr p13 p13 111577 ChimerSeq ChiTaRs ChiTaRs SF3B1-SF3B1 SF3B1 chr2 198259365 SF3B1 chr2 198258510 Exonic hg19 NA AW015852 Out-of-frame Intra-chr q33.1 Oncogene q33.1 Oncogene 111578 ChimerSeq ChiTaRs ChiTaRs DNAJB9-DNAJB9 DNAJB9 chr7 108214845 DNAJB9 chr7 108214694 Exonic hg19 NA AI654302 Out-of-frame Intra-chr q31.1 q31.1 111579 ChimerSeq ChiTaRs ChiTaRs MGMT-MGMT MGMT chr10 131557607 MGMT chr10 131565108 Exonic hg19 NA BG163522 Out-of-frame Intra-chr q26.3 q26.3 111580 ChimerSeq ChiTaRs ChiTaRs PVRL3-PVRL3 PVRL3 chr3 110856850 PVRL3 chr3 110856866 Exonic hg19 NA CB856872 Out-of-frame Intra-chr 111581 ChimerSeq ChiTaRs ChiTaRs APITD1-CORT-APITD1-CORT APITD1-CORT chr1 10505186 APITD1-CORT chr1 10504419 Exonic hg19 NA AW861592 Out-of-frame Intra-chr p36.22 Tumor suppressor gene p36.22 111582 ChimerSeq ChiTaRs ChiTaRs RBPMS-RBM26 RBPMS chr8 30408485 RBM26 chr13 79928989 Exonic hg19 NA BF988612 Out-of-frame Inter-chr p12 q31.1 111583 ChimerSeq ChiTaRs ChiTaRs SKIV2L2-SKIV2L2 SKIV2L2 chr5 54721708 SKIV2L2 chr5 54720910 Exonic hg19 NA BE768762 Out-of-frame Intra-chr q11.2 q11.2 111584 ChimerSeq ChiTaRs ChiTaRs AQP7P1-TSPO AQP7P1 chr9 67286761 TSPO chr22 43556835 Exonic hg19 NA BX537892 Out-of-frame Inter-chr q13 q13.2 111585 ChimerSeq ChiTaRs ChiTaRs UPP1-ESYT1 UPP1 chr7 48147012 ESYT1 chr12 56537665 Exonic hg19 NA BF808072 Out-of-frame Inter-chr p12.3 q13.2 111586 ChimerSeq ChiTaRs ChiTaRs FLJ23867-FLJ23867 FLJ23867 chr1 180168631 FLJ23867 chr1 180168880 Exonic hg19 NA BF334422 Out-of-frame Intra-chr 111587 ChimerSeq ChiTaRs ChiTaRs MAFK-MAFK MAFK chr7 1582337 MAFK chr7 1581666 Exonic hg19 NA CB055092 Out-of-frame Intra-chr p22.3 Transcription factor p22.3 Transcription factor 111588 ChimerSeq ChiTaRs ChiTaRs ABL2-ABL2 ABL2 chr1 179171335 ABL2 chr1 179170796 Exonic hg19 NA AL120022 Out-of-frame Intra-chr q25.2 TK:Abl Oncogene q25.2 TK:Abl Oncogene 111589 ChimerSeq ChiTaRs ChiTaRs THUMPD2-THUMPD2 THUMPD2 chr2 39963726 THUMPD2 chr2 39963704 Exonic hg19 NA BU689932 Out-of-frame Intra-chr p22.1 p22.1 111590 ChimerSeq ChiTaRs ChiTaRs TRERF1-PCLO TRERF1 chr6 42393969 PCLO chr7 82595410 Exonic hg19 NA BF376482 Out-of-frame Inter-chr p21.1 Transcription factor q21.11 111591 ChimerSeq ChiTaRs ChiTaRs HNRNPU-HNRNPU HNRNPU chr1 245023688 HNRNPU chr1 245019358 Exonic hg19 NA BE703732 Out-of-frame Intra-chr q44 q44 111592 ChimerSeq ChiTaRs ChiTaRs ABCA11P-CRLS1 ABCA11P chr4 431791 CRLS1 chr20 5989428 Exonic hg19 NA CB163082 Out-of-frame Inter-chr p16.3 p12.3 111593 ChimerSeq ChiTaRs ChiTaRs TNNI1-TNNI1 TNNI1 chr1 201384390 TNNI1 chr1 201384411 Exonic hg19 NA BF088112 Out-of-frame Intra-chr q32.1 q32.1 111594 ChimerSeq ChiTaRs ChiTaRs KCNN2-KCNN2 KCNN2 chr5 113740109 KCNN2 chr5 113740107 Exonic hg19 NA AB076972 Out-of-frame Intra-chr q22.3 q22.3 111595 ChimerSeq ChiTaRs ChiTaRs GSN-GALC GSN chr9 124053530 GALC chr14 88400470 Exonic hg19 NA BQ292312 Out-of-frame Inter-chr q33.2 Tumor suppressor gene q31.3 111596 ChimerSeq ChiTaRs ChiTaRs ARHGAP26-FGF1 ARHGAP26 chr5 142150940 FGF1 chr5 141974837 Exonic hg19 NA DA127072 Out-of-frame Intra-chr q31.3 q31.3 111597 ChimerSeq ChiTaRs ChiTaRs SMARCAL1-MBP SMARCAL1 chr2 217297508 MBP chr18 74696805 Exonic hg19 NA DA130152 Out-of-frame Inter-chr q35 q23 111598 ChimerSeq ChiTaRs ChiTaRs GGCX-ZFP91 GGCX chr2 85778430 ZFP91 chr11 58387580 Exonic hg19 NA BQ355482 Out-of-frame Inter-chr p11.2 q12.1 Transcription factor 111599 ChimerSeq ChiTaRs ChiTaRs PAM-GOLGA3 PAM chr5 102339732 GOLGA3 chr12 133393131 Exonic hg19 NA BG949772 Out-of-frame Inter-chr q21.1 q24.33 111600 ChimerSeq ChiTaRs ChiTaRs RPL30-REG4 RPL30 chr8 99054887 REG4 chr1 120342385 Exonic hg19 NA AA315842 Out-of-frame Inter-chr q22.2 p12 111601 ChimerSeq ChiTaRs ChiTaRs CHI3L1-THBS3 CHI3L1 chr1 203152850 THBS3 chr1 155169591 Exonic hg19 NA BF912932 Out-of-frame Intra-chr q32.1 q22 111602 ChimerSeq ChiTaRs ChiTaRs CAST-CAST CAST chr5 96065424 CAST chr5 96108637 Exonic hg19 NA AI492202 Out-of-frame Intra-chr q15 q15 111603 ChimerSeq ChiTaRs ChiTaRs CCDC129-CCDC129 CCDC129 chr7 31695019 CCDC129 chr7 31695172 Exonic hg19 NA AW891032 Out-of-frame Intra-chr p14.3 p14.3 111604 ChimerSeq ChiTaRs ChiTaRs MTHFD1L-MTHFD1L MTHFD1L chr6 151301123 MTHFD1L chr6 151310903 Exonic hg19 NA AA811452 Out-of-frame Intra-chr q25.1 q25.1 111605 ChimerSeq ChiTaRs ChiTaRs NFIA-RYR2 NFIA chr1 61717886 RYR2 chr1 237927711 Exonic hg19 NA BX479192 Out-of-frame Intra-chr p31.3 Transcription factor q43 111606 ChimerSeq ChiTaRs ChiTaRs CD59-CD59 CD59 chr11 33730488 CD59 chr11 33730412 Exonic hg19 NA BG122832 Out-of-frame Intra-chr p13 p13 111607 ChimerSeq ChiTaRs ChiTaRs FDFT1-ARHGAP31 FDFT1 chr8 11685009 ARHGAP31 chr3 119045546 Exonic hg19 NA BF996032 Out-of-frame Inter-chr p23.1 q13.32 111608 ChimerSeq ChiTaRs ChiTaRs MLLT3-MLL MLLT3 chr9 20360029 MLL chr11 118353468 Exonic hg19 NA AY840547 Out-of-frame Inter-chr p21.3 q23.3 111609 ChimerSeq ChiTaRs ChiTaRs FIP1L1-FIP1L1 FIP1L1 chr4 54310271 FIP1L1 chr4 54292038 Exonic hg19 NA BF763372 Out-of-frame Intra-chr q12 q12 111610 ChimerSeq ChiTaRs ChiTaRs ELMOD2-ELMOD2 ELMOD2 chr4 141471520 ELMOD2 chr4 141471495 Exonic hg19 NA BQ215622 Out-of-frame Intra-chr q31.1 q31.1 111611 ChimerSeq ChiTaRs ChiTaRs LIPA-CLIP1 LIPA chr10 91067605 CLIP1 chr12 122888780 Exonic hg19 NA BQ346872 Out-of-frame Inter-chr q23.31 q24.31 111612 ChimerSeq ChiTaRs ChiTaRs SH3PXD2A-SH3PXD2A SH3PXD2A chr10 105356202 SH3PXD2A chr10 105356475 Exonic hg19 NA BU739242 Out-of-frame Intra-chr q24.33 q24.33 111613 ChimerSeq ChiTaRs ChiTaRs RPL11-TKT RPL11 chr1 24020406 TKT chr3 53259668 Exonic hg19 NA CD388242 Out-of-frame Inter-chr p36.11 Tumor suppressor gene p21.1 Tumor suppressor gene 111614 ChimerSeq ChiTaRs ChiTaRs AKR1A1-MED20 AKR1A1 chr1 46033519 MED20 chr6 41873092 Exonic hg19 NA AF116602 Out-of-frame Inter-chr p34.1 p21.1 111615 ChimerSeq ChiTaRs ChiTaRs CTNNA1-CTNNA1 CTNNA1 chr5 138188173 CTNNA1 chr5 138187909 Exonic hg19 NA CV409602 Out-of-frame Intra-chr q31.2 Oncogene q31.2 Oncogene 111616 ChimerSeq ChiTaRs ChiTaRs AP3B1-AP3B1 AP3B1 chr5 77401966 AP3B1 chr5 77401234 Exonic hg19 NA BF335662 Out-of-frame Intra-chr q14.1 q14.1 111617 ChimerSeq ChiTaRs ChiTaRs MTM1-MTM1 MTM1 chrX 149841357 MTM1 chrX 149841310 Exonic hg19 NA AA506682 Out-of-frame Intra-chr q28 q28 111618 ChimerSeq ChiTaRs ChiTaRs ARHGAP26-NRG1 ARHGAP26 chr5 142164932 NRG1 chr8 31849790 Exonic hg19 NA BF959772 Out-of-frame Inter-chr q31.3 p12 111619 ChimerSeq ChiTaRs ChiTaRs PCDH7-RAP1A PCDH7 chr4 31144576 RAP1A chr1 112237972 Exonic hg19 NA BF948052 Out-of-frame Inter-chr p15.1 p13.2 Tumor suppressor gene 111620 ChimerSeq ChiTaRs ChiTaRs SLC29A3-ATF7 SLC29A3 chr10 73122511 ATF7 chr12 53908643 Exonic hg19 NA BF764042 Out-of-frame Inter-chr q22.1 q13.13 Transcription factor 111621 ChimerSeq ChiTaRs ChiTaRs CBWD2-RPL28 CBWD2 chr2 114223370 RPL28 chr19 55897717 Exonic hg19 NA BQ648662 CDS-5'UTR Inter-chr q14.1 q13.42 111622 ChimerSeq ChiTaRs ChiTaRs ATG7-ATG7 ATG7 chr3 11500877 ATG7 chr3 11500028 Exonic hg19 NA CK824912 Out-of-frame Intra-chr p25.3 p25.3 111623 ChimerSeq ChiTaRs ChiTaRs SYDE2-SYDE2 SYDE2 chr1 85648378 SYDE2 chr1 85656290 Exonic hg19 NA AU141312 Out-of-frame Intra-chr p22.3 p22.3 111624 ChimerSeq ChiTaRs ChiTaRs SMOC2-SCRN3 SMOC2 chr6 169056939 SCRN3 chr2 175286492 Exonic hg19 NA CA412182 Out-of-frame Inter-chr q27 q31.1 111625 ChimerSeq ChiTaRs ChiTaRs YWHAZ-CAMTA2 YWHAZ chr8 101943701 CAMTA2 chr17 4875587 Exonic hg19 NA BG985122 Out-of-frame Inter-chr q22.3 p13.2 Transcription factor 111626 ChimerSeq ChiTaRs ChiTaRs SPOCK3-ADCY2 SPOCK3 chr4 167654988 ADCY2 chr1 152004992 Exonic hg19 NA BM968972 Out-of-frame Inter-chr q32.3 p15.31 111627 ChimerSeq ChiTaRs ChiTaRs SEC31A-SEC31A SEC31A chr4 83741270 SEC31A chr4 83742092 Exonic hg19 NA AV746752 Out-of-frame Intra-chr q21.22 q21.22 111628 ChimerSeq ChiTaRs ChiTaRs EDF1-EDF1 EDF1 chr9 139757389 EDF1 chr9 139757433 Exonic hg19 NA AA659192 Out-of-frame Intra-chr q34.3 q34.3 111629 ChimerSeq ChiTaRs ChiTaRs RPL8-ACTG1 RPL8 chr8 146017527 ACTG1 chr17 79478270 Exonic hg19 NA BQ949002 Out-of-frame Inter-chr q24.3 q25.3 111630 ChimerSeq ChiTaRs ChiTaRs CCDC162P-CCDC162P CCDC162P chr6 109676244 CCDC162P chr6 109675829 Exonic hg19 NA BU676062 Out-of-frame Intra-chr q21 q21 111631 ChimerSeq ChiTaRs ChiTaRs MFSD2A-GOLGA8B MFSD2A chr1 40427920 GOLGA8B chr15 34818178 Exonic hg19 NA AF164622 Out-of-frame Inter-chr p34.2 Tumor suppressor gene q14 111632 ChimerSeq ChiTaRs ChiTaRs GAD1-PARD3 GAD1 chr2 171690286 PARD3 chr10 34606035 Exonic hg19 NA AW609892 Out-of-frame Inter-chr q31.1 p11.21 111633 ChimerSeq ChiTaRs ChiTaRs PHKA1-OLFML2B PHKA1 chrX 71880545 OLFML2B chr1 161953016 Exonic hg19 NA AA328772 Out-of-frame Inter-chr q13.1 q23.3 111634 ChimerSeq ChiTaRs ChiTaRs CUX1-CUX1 CUX1 chr7 101620066 CUX1 chr7 101616719 Exonic hg19 NA AW810962 Out-of-frame Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 Tumor suppressor gene Transcription factor 111635 ChimerSeq ChiTaRs ChiTaRs PSAP-THBS3 PSAP chr10 73576504 THBS3 chr1 155167619 Exonic hg19 NA BG995962 Out-of-frame Inter-chr q22.1 q22 111636 ChimerSeq ChiTaRs ChiTaRs RFC1-TEK RFC1 chr4 39310592 TEK chr9 27109286 Exonic hg19 NA AI760472 Out-of-frame Inter-chr p14 p21.2 111637 ChimerSeq ChiTaRs ChiTaRs TGFA-TGFA TGFA chr2 70674639 TGFA chr2 70674626 Exonic hg19 NA AW262052 Out-of-frame Intra-chr p13.3 p13.3 111638 ChimerSeq ChiTaRs ChiTaRs RBM47-RBM47 RBM47 chr4 40462146 RBM47 chr4 40462246 Exonic hg19 NA BE833842 Out-of-frame Intra-chr p14 p14 111639 ChimerSeq ChiTaRs ChiTaRs UGGT1-UGGT1 UGGT1 chr2 128951664 UGGT1 chr2 128949366 Exonic hg19 NA BM463172 Out-of-frame Intra-chr q14.3 q14.3 111640 ChimerSeq ChiTaRs ChiTaRs CCDC69-SPTLC3 CCDC69 chr5 150562222 SPTLC3 chr20 13113216 Exonic hg19 NA BF987332 Out-of-frame Inter-chr q33.1 p12.1 111641 ChimerSeq ChiTaRs ChiTaRs NAA10-ZDHHC16 NAA10 chrX 153197813 ZDHHC16 chr10 99211866 Exonic hg19 NA BF916762 Out-of-frame Inter-chr q28 q24.1 111642 ChimerSeq ChiTaRs ChiTaRs CCDC14-CCDC14 CCDC14 chr3 123649974 CCDC14 chr3 123665869 Exonic hg19 NA AW850012 Out-of-frame Intra-chr q21.1 q21.1 111643 ChimerSeq ChiTaRs ChiTaRs CSF3R-DAB2 CSF3R chr1 36939400 DAB2 chr5 39393378 Exonic hg19 NA BG006262 Out-of-frame Inter-chr p34.3 p13.1 Tumor suppressor gene 111644 ChimerSeq ChiTaRs ChiTaRs NUDT3-ARL8B NUDT3 chr6 34346879 ARL8B chr3 5215938 Exonic hg19 NA BI019122 Out-of-frame Inter-chr p21.31 p26.1 111645 ChimerSeq ChiTaRs ChiTaRs TRMT2B-TNFRSF12A TRMT2B chrX 100264905 TNFRSF12A chr16 3072052 Exonic hg19 NA BI053522 Out-of-frame Inter-chr q22.1 p13.3 Tumor suppressor gene 111646 ChimerSeq ChiTaRs ChiTaRs ANKRD17-ANKRD17 ANKRD17 chr4 74099014 ANKRD17 chr4 74114996 Exonic hg19 NA AF075002 Out-of-frame Intra-chr q13.3 q13.3 111647 ChimerSeq ChiTaRs ChiTaRs STYXL1-PPIL2 STYXL1 chr7 75634641 PPIL2 chr22 22036785 Exonic hg19 NA BE717592 Out-of-frame Inter-chr q11.23 q11.21 111648 ChimerSeq ChiTaRs ChiTaRs PLEC-SYMPK PLEC chr8 145001505 SYMPK chr19 46321354 Exonic hg19 NA BG005652 Out-of-frame Inter-chr q24.3 q13.32 111649 ChimerSeq ChiTaRs ChiTaRs MR1-MR1 MR1 chr1 181025014 MR1 chr1 181024531 Exonic hg19 NA BF883362 Out-of-frame Intra-chr q25.3 q25.3 111650 ChimerSeq ChiTaRs ChiTaRs MIA3-NUP98 MIA3 chr1 222824586 NUP98 chr11 3696249 Exonic hg19 NA AI168219 Out-of-frame Inter-chr q41 p15.4 Oncogene Tumor suppressor gene 111651 ChimerSeq ChiTaRs ChiTaRs FNTA-FNTA FNTA chr8 42912797 FNTA chr8 42915892 Exonic hg19 NA AA493202 Out-of-frame Intra-chr p11.21 p11.21 111652 ChimerSeq ChiTaRs ChiTaRs TMEM109-TMEM109 TMEM109 chr11 60689998 TMEM109 chr11 60687252 Exonic hg19 NA BG015922 Out-of-frame Intra-chr q12.2 q12.2 111653 ChimerSeq ChiTaRs ChiTaRs ENY2-GPD2 ENY2 chr8 110355893 GPD2 chr2 157375189 Exonic hg19 NA BF310332 Out-of-frame Inter-chr q23.1 q24.1 111654 ChimerSeq ChiTaRs ChiTaRs ASRGL1-MYBL2 ASRGL1 chr11 62124677 MYBL2 chr20 42340148 Exonic hg19 NA BF056302 Out-of-frame Inter-chr q12.3 q13.12 Transcription factor 111655 ChimerSeq ChiTaRs ChiTaRs PEG10-EIF3D PEG10 chr7 94298920 EIF3D chr22 36920643 Exonic hg19 NA BM910722 Out-of-frame Inter-chr q21.3 q12.3 111656 ChimerSeq ChiTaRs ChiTaRs SNTG1-ATXN7 SNTG1 chr8 50998421 ATXN7 chr3 63911523 Exonic hg19 NA DA057812 Out-of-frame Inter-chr q11.21 p14.1 111657 ChimerSeq ChiTaRs ChiTaRs ZDHHC9-KRT15 ZDHHC9 chrX 128954288 KRT15 chr17 39674591 Exonic hg19 NA BF815792 Out-of-frame Inter-chr q26.1 q21.2 111658 ChimerSeq ChiTaRs ChiTaRs MEMO1-MEMO1 MEMO1 chr2 32235433 MEMO1 chr2 32093191 Exonic hg19 NA BC036262 Out-of-frame Intra-chr p22.3 p22.3 111659 ChimerSeq ChiTaRs ChiTaRs LOC285441-ZDHHC16 LOC285441 chr4 187422114 ZDHHC16 chr10 99212889 Exonic hg19 NA BE897132 Out-of-frame Inter-chr q24.1 111660 ChimerSeq ChiTaRs ChiTaRs SCIN-RNF38 SCIN chr7 12631880 RNF38 chr9 36352806 Exonic hg19 NA BF997802 Out-of-frame Inter-chr p21.3 p13.2 111661 ChimerSeq ChiTaRs ChiTaRs NCL-EEF1DP3 NCL chr2 232320847 EEF1DP3 chr13 32525027 Exonic hg19 NA BF930342 CDS-5'UTR Inter-chr q37.1 q13.1 111662 ChimerSeq ChiTaRs ChiTaRs COPS7B-COPS7B COPS7B chr2 232673432 COPS7B chr2 232673179 Exonic hg19 NA AI631312 Out-of-frame Intra-chr q37.1 q37.1 111663 ChimerSeq ChiTaRs ChiTaRs TCF7L1-TCF7L1 TCF7L1 chr2 85454388 TCF7L1 chr2 85454170 Exonic hg19 NA BF380542 Out-of-frame Intra-chr p11.2 Oncogene Transcription factor p11.2 Oncogene Transcription factor 111664 ChimerSeq ChiTaRs ChiTaRs USP42-USP42 USP42 chr7 6196450 USP42 chr7 6194727 Exonic hg19 NA CA502852 Out-of-frame Intra-chr p22.1 p22.1 111665 ChimerSeq ChiTaRs ChiTaRs RPS20-CLEC18A RPS20 chr8 56985763 CLEC18A chr16 70194360 Exonic hg19 NA BF081982 Out-of-frame Inter-chr q12.1 q22.1 111666 ChimerSeq ChiTaRs ChiTaRs INSIG1-C3orf17 INSIG1 chr7 155101701 C3orf17 chr3 112724705 Exonic hg19 NA BF096112 Out-of-frame Inter-chr q36.3 111667 ChimerSeq ChiTaRs ChiTaRs PLEKHA6-CYP19A1 PLEKHA6 chr1 204240881 CYP19A1 chr15 51504596 Exonic hg19 NA BI053792 Out-of-frame Inter-chr q32.1 q21.2 111668 ChimerSeq ChiTaRs ChiTaRs WDR60-MYH9 WDR60 chr7 158660016 MYH9 chr22 36702490 Exonic hg19 NA BE927852 Out-of-frame Inter-chr q36.3 q12.3 Oncogene Tumor suppressor gene 111669 ChimerSeq ChiTaRs ChiTaRs MIR548O2-TET3 MIR548O2 chr8 29940618 TET3 chr2 74323616 Exonic hg19 NA CD251462 Out-of-frame Inter-chr q11.23 p13.1 Transcription factor 111670 ChimerSeq ChiTaRs ChiTaRs SLC25A53-SLC25A53 SLC25A53 chrX 103367145 SLC25A53 chrX 103367305 Exonic hg19 NA AI272812 Out-of-frame Intra-chr q22.2 q22.2 111671 ChimerSeq ChiTaRs ChiTaRs SULF1-PLSCR1 SULF1 chr8 70483724 PLSCR1 chr3 146248332 Exonic hg19 NA AW934802 Out-of-frame Inter-chr q13.2 q24 Transcription factor 111672 ChimerSeq ChiTaRs ChiTaRs GNAI2-MBD5 GNAI2 chr3 50268611 MBD5 chr2 149024645 Exonic hg19 NA BM684932 Out-of-frame Inter-chr p21.31 q23.1 111673 ChimerSeq ChiTaRs ChiTaRs TRERF1-HSPB8 TRERF1 chr6 42387475 HSPB8 chr12 119632111 Exonic hg19 NA BF354872 Out-of-frame Inter-chr p21.1 Transcription factor q24.23 111674 ChimerSeq ChiTaRs ChiTaRs LPP-LPP LPP chr3 188403616 LPP chr3 188403167 Exonic hg19 NA AA502492 Out-of-frame Intra-chr q27.3 Oncogene q27.3 Oncogene 111675 ChimerSeq ChiTaRs ChiTaRs ARIH2-TOX3 ARIH2 chr3 48971421 TOX3 chr16 52517747 Exonic hg19 NA AI078332 Out-of-frame Inter-chr p21.31 q12.1 111676 ChimerSeq ChiTaRs ChiTaRs ARL5A-SLC44A5 ARL5A chr2 152659274 SLC44A5 chr1 75686256 Exonic hg19 NA AW772042 Out-of-frame Inter-chr q23.3 p31.1 111677 ChimerSeq ChiTaRs ChiTaRs C5orf51-C5orf51 C5orf51 chr5 41917512 C5orf51 chr5 41912235 Exonic hg19 NA AW404332 Out-of-frame Intra-chr p13.1 p13.1 111678 ChimerSeq ChiTaRs ChiTaRs NMT2-FKBP4 NMT2 chr10 15175346 FKBP4 chr12 2907895 Exonic hg19 NA BI004482 Out-of-frame Inter-chr p13 p13.33 111679 ChimerSeq ChiTaRs ChiTaRs APC-RBMS1 APC chr5 112179128 RBMS1 chr2 161223859 Exonic hg19 NA AA406272 Out-of-frame Inter-chr q22.2 Oncogene Tumor suppressor gene q24.2 111680 ChimerSeq ChiTaRs ChiTaRs HTATSF1-HTATSF1 HTATSF1 chrX 135594314 HTATSF1 chrX 135593574 Exonic hg19 NA AW364522 Out-of-frame Intra-chr q26.3 q26.3 111681 ChimerSeq ChiTaRs ChiTaRs PPP2CA-PPP2CA PPP2CA chr5 133533038 PPP2CA chr5 133533382 Exonic hg19 NA CD722562 Out-of-frame Intra-chr q31.1 Tumor suppressor gene q31.1 Tumor suppressor gene 111682 ChimerSeq ChiTaRs ChiTaRs ANXA5-ANXA5 ANXA5 chr4 122589552 ANXA5 chr4 122589537 Exonic hg19 NA AI923732 Out-of-frame Intra-chr q27 q27 111683 ChimerSeq ChiTaRs ChiTaRs NAV2-C8A NAV2 chr11 19990454 C8A chr1 57383280 Exonic hg19 NA BG567002 Out-of-frame Inter-chr p15.1 p32.2 111684 ChimerSeq ChiTaRs ChiTaRs DPYD-LOC100507373 DPYD chr1 98129251 LOC100507373 chr19 14280890 Exonic hg19 NA BG988212 Out-of-frame Inter-chr p21.3 Oncogene 111685 ChimerSeq ChiTaRs ChiTaRs RC3H2-NDRG3 RC3H2 chr9 125616885 NDRG3 chr20 35280174 Exonic hg19 NA AL121222 Out-of-frame Inter-chr q33.2 q11.23 111686 ChimerSeq ChiTaRs ChiTaRs UBQLN1-IGFBP4 UBQLN1 chr9 86275031 IGFBP4 chr17 38613749 Exonic hg19 NA BG272382 Out-of-frame Inter-chr q21.32 q21.2 Tumor suppressor gene 111687 ChimerSeq ChiTaRs ChiTaRs CENPQ-CENPQ CENPQ chr6 49437765 CENPQ chr6 49436890 Exonic hg19 NA CF137902 Out-of-frame Intra-chr p12.3 p12.3 111688 ChimerSeq ChiTaRs ChiTaRs SERINC1-SERINC1 SERINC1 chr6 122765086 SERINC1 chr6 122764693 Exonic hg19 NA BF376472 Out-of-frame Intra-chr q22.31 q22.31 111689 ChimerSeq ChiTaRs ChiTaRs GUK1-GUK1 GUK1 chr1 228333590 GUK1 chr1 228332908 Exonic hg19 NA BF987582 Out-of-frame Intra-chr q42.13 q42.13 111690 ChimerSeq ChiTaRs ChiTaRs IFI6-SERINC1 IFI6 chr1 27994276 SERINC1 chr6 122764948 Exonic hg19 NA BF576882 Out-of-frame Inter-chr p35.3 q22.31 111691 ChimerSeq ChiTaRs ChiTaRs TP73-AS1-MUM1 TP73-AS1 chr1 3654172 MUM1 chr19 1364785 Exonic hg19 NA AI693682 Out-of-frame Inter-chr p36.32 Tumor suppressor gene Transcription factor p13.3 Tumor suppressor gene 111692 ChimerSeq ChiTaRs ChiTaRs CUZD1-PACS1 CUZD1 chr10 124613051 PACS1 chr11 65885385 Exonic hg19 NA BF851732 Out-of-frame Inter-chr q26.13 q13.1 111693 ChimerSeq ChiTaRs ChiTaRs BASP1-BASP1 BASP1 chr5 17276760 BASP1 chr5 17275966 Exonic hg19 NA BQ772162 Out-of-frame Intra-chr p15.1 Tumor suppressor gene p15.1 Tumor suppressor gene 111694 ChimerSeq ChiTaRs ChiTaRs JTB-JTB JTB chr1 153949862 JTB chr1 153947045 Exonic hg19 NA BE294812 Out-of-frame Intra-chr q21.3 q21.3 111695 ChimerSeq ChiTaRs ChiTaRs SNTG2-GCLM SNTG2 chr2 1064058 GCLM chr1 94353207 Exonic hg19 NA AA451832 Out-of-frame Inter-chr p22.1 111696 ChimerSeq ChiTaRs ChiTaRs ALAD-ESRP2 ALAD chr9 116163552 ESRP2 chr16 68263305 Exonic hg19 NA BC009172 Out-of-frame Inter-chr q32 q22.1 111697 ChimerSeq ChiTaRs ChiTaRs IQCE-PPM1G IQCE chr7 2629737 PPM1G chr2 27605352 Exonic hg19 NA BG958222 Out-of-frame Inter-chr p22.3 p23.3 111698 ChimerSeq ChiTaRs ChiTaRs FRS3-SMA4 FRS3 chr6 41738900 SMA4 chr5 70074404 Exonic hg19 NA AW594121 Out-of-frame Inter-chr p21.1 Tumor suppressor gene 111699 ChimerSeq ChiTaRs ChiTaRs GAS5-RPL36A-HNRNPH2 GAS5 chr1 173834566 RPL36A-HNRNPH2 chrX 100656106 Exonic hg19 NA AV757482 Out-of-frame Inter-chr q25.1 Tumor suppressor gene q22.1 111700 ChimerSeq ChiTaRs ChiTaRs NFIB-ERBB4 NFIB chr9 14106722 ERBB4 chr2 212907661 Exonic hg19 NA BF833532 Out-of-frame Inter-chr p22.3 Transcription factor q34 Oncogene Tumor suppressor gene 111701 ChimerSeq ChiTaRs ChiTaRs SOX7-SOX7 SOX7 chr8 10623083 SOX7 chr8 10622683 Exonic hg19 NA AA481892 Out-of-frame Intra-chr p23.1 Tumor suppressor gene Transcription factor p23.1 Tumor suppressor gene Transcription factor 111702 ChimerSeq ChiTaRs ChiTaRs GCFC2-GCFC2 GCFC2 chr2 75916350 GCFC2 chr2 75917727 Exonic hg19 NA BF762662 Out-of-frame Intra-chr p12 p12 111703 ChimerSeq ChiTaRs ChiTaRs MFF-MFF MFF chr2 228213848 MFF chr2 228213844 Exonic hg19 NA AA668862 Out-of-frame Intra-chr q36.3 q36.3 111704 ChimerSeq ChiTaRs ChiTaRs GALNT10-GALNT10 GALNT10 chr5 153800494 GALNT10 chr5 153799900 Exonic hg19 NA BF155072 Out-of-frame Intra-chr q33.2 q33.2 111705 ChimerSeq ChiTaRs ChiTaRs IL1RN-IL1RN IL1RN chr2 113890867 IL1RN chr2 113890561 Exonic hg19 NA BM968852 Out-of-frame Intra-chr q14.1 q14.1 111706 ChimerSeq ChiTaRs ChiTaRs CNNM3-CNNM3 CNNM3 chr2 97499259 CNNM3 chr2 97498922 Exonic hg19 NA AA229402 Out-of-frame Intra-chr q11.2 q11.2 111707 ChimerSeq ChiTaRs ChiTaRs HLA-DMB-HLA-DMB HLA-DMB chr6 4361931 HLA-DMB chr6 4334896 Exonic hg19 NA BF364332 Out-of-frame Intra-chr 111708 ChimerSeq ChiTaRs ChiTaRs GLO1-GLO1 GLO1 chr6 38644171 GLO1 chr6 38644153 Exonic hg19 NA AW974402 Out-of-frame Intra-chr p21.2 p21.2 111709 ChimerSeq ChiTaRs ChiTaRs GPBP1-GPBP1 GPBP1 chr5 56559074 GPBP1 chr5 56559044 Exonic hg19 NA BU676752 Out-of-frame Intra-chr q11.2 Transcription factor q11.2 Transcription factor 111710 ChimerSeq ChiTaRs ChiTaRs UTRN-UTRN UTRN chr6 145173917 UTRN chr6 145173565 Exonic hg19 NA D81982 Out-of-frame Intra-chr q24.2 q24.2 111711 ChimerSeq ChiTaRs ChiTaRs CELF1-CELF1 CELF1 chr11 47489719 CELF1 chr11 47488132 Exonic hg19 NA BE178392 Out-of-frame Intra-chr p11.2 p11.2 111712 ChimerSeq ChiTaRs ChiTaRs TRIP12-TRIP12 TRIP12 chr2 230638512 TRIP12 chr2 230658804 Exonic hg19 NA AA481192 Out-of-frame Intra-chr q36.3 q36.3 111713 ChimerSeq ChiTaRs ChiTaRs LGALS8-LGALS8 LGALS8 chr1 236712008 LGALS8 chr1 236712223 Exonic hg19 NA AW752952 Out-of-frame Intra-chr q43 q43 111714 ChimerSeq ChiTaRs ChiTaRs BTBD10-IPO5 BTBD10 chr11 13443331 IPO5 chr13 98654960 Exonic hg19 NA AW606752 Out-of-frame Inter-chr p15.3 q32.2 111715 ChimerSeq ChiTaRs ChiTaRs RAC1-TRAF3IP2-AS1 RAC1 chr7 6422126 TRAF3IP2-AS1 chr6 111915051 Exonic hg19 NA AW937502 Out-of-frame Inter-chr p22.1 Oncogene q21 111716 ChimerSeq ChiTaRs ChiTaRs GRAMD3-GRAMD3 GRAMD3 chr5 125829326 GRAMD3 chr5 125829243 Exonic hg19 NA BE835932 Out-of-frame Intra-chr q23.2 q23.2 111717 ChimerSeq ChiTaRs ChiTaRs PARP14-SLC44A5 PARP14 chr3 122449678 SLC44A5 chr1 76135444 Exonic hg19 NA AI634522 Out-of-frame Inter-chr q21.1 p31.1 111718 ChimerSeq ChiTaRs ChiTaRs BUB1-RGS2 BUB1 chr2 111430434 RGS2 chr1 192780565 Exonic hg19 NA AU119852 In-Frame Inter-chr q13 Other:BUB q31.2 111719 ChimerSeq ChiTaRs ChiTaRs LOC728323-FRYL LOC728323 chr2 243064517 FRYL chr4 48542468 Exonic hg19 NA BE002052 Out-of-frame Inter-chr p11 111720 ChimerSeq ChiTaRs ChiTaRs PTPN4-PTPN4 PTPN4 chr2 120695005 PTPN4 chr2 120695008 Exonic hg19 NA AA837802 Out-of-frame Intra-chr q14.2 q14.2 111721 ChimerSeq ChiTaRs ChiTaRs SSR1-RBFOX2 SSR1 chr6 7300912 RBFOX2 chr22 36423124 Exonic hg19 NA AI082662 Out-of-frame Inter-chr p24.3 111722 ChimerSeq ChiTaRs ChiTaRs TJAP1-CAPN1 TJAP1 chr6 43472512 CAPN1 chr11 64954941 Exonic hg19 NA BE143942 Out-of-frame Inter-chr p21.1 q13.1 111723 ChimerSeq ChiTaRs ChiTaRs VHL-VHL VHL chr3 10194592 VHL chr3 10192792 Exonic hg19 NA CA391692 Out-of-frame Intra-chr p25.3 Oncogene Tumor suppressor gene p25.3 Oncogene Tumor suppressor gene 111724 ChimerSeq ChiTaRs ChiTaRs LOC389831-NFYC LOC389831 chr7 53718 NFYC chr1 41174997 Exonic hg19 NA BE179202 Out-of-frame Inter-chr p34.2 Transcription factor 111725 ChimerSeq ChiTaRs ChiTaRs ZKSCAN5-PTMA ZKSCAN5 chr7 99128776 PTMA chr2 232576679 Exonic hg19 NA BC015622 Out-of-frame Inter-chr q22.1 Transcription factor q37.1 111726 ChimerSeq ChiTaRs ChiTaRs RPLP2-MNDA RPLP2 chr11 812874 MNDA chr1 158815429 Exonic hg19 NA CB529802 Out-of-frame Inter-chr p15.5 q23.1 111727 ChimerSeq ChiTaRs ChiTaRs RPL35-DIAPH1 RPL35 chr9 127624236 DIAPH1 chr5 140896140 Exonic hg19 NA BF802262 Out-of-frame Inter-chr q33.3 q31.3 111728 ChimerSeq ChiTaRs ChiTaRs PLOD2-PLOD2 PLOD2 chr3 145787689 PLOD2 chr3 145787802 Exonic hg19 NA AA503462 Out-of-frame Intra-chr q24 q24 111729 ChimerSeq ChiTaRs ChiTaRs TMEM179B-TCEAL3 TMEM179B chr11 62557708 TCEAL3 chrX 102864548 Exonic hg19 NA CB053892 Out-of-frame Inter-chr q12.3 q22.2 111730 ChimerSeq ChiTaRs ChiTaRs UHRF2-PUM2 UHRF2 chr9 6506169 PUM2 chr2 20451337 Exonic hg19 NA BE697672 Out-of-frame Inter-chr p24.1 Tumor suppressor gene p24.1 111731 ChimerSeq ChiTaRs ChiTaRs IGFBP3-MAMDC2 IGFBP3 chr7 45960872 MAMDC2 chr9 72833417 Exonic hg19 NA DA574652 Out-of-frame Inter-chr p12.3 Tumor suppressor gene q21.12 111732 ChimerSeq ChiTaRs ChiTaRs TTTY14-CRIM1 TTTY14 chrY 21154652 CRIM1 chr2 36764121 Exonic hg19 NA BI022702 Out-of-frame Inter-chr q11.222 p22.2 111733 ChimerSeq ChiTaRs ChiTaRs SYT7-PLA2G6 SYT7 chr11 61300411 PLA2G6 chr22 38522251 Exonic hg19 NA BF871762 Out-of-frame Inter-chr q12.2 q13.1 111734 ChimerSeq ChiTaRs ChiTaRs MTX2-MTX2 MTX2 chr2 177202663 MTX2 chr2 177202221 Exonic hg19 NA CA449952 Out-of-frame Intra-chr q31.1 q31.1 111735 ChimerSeq ChiTaRs ChiTaRs HLA-H-ZMYND11 HLA-H chr6 29913414 ZMYND11 chr10 297995 Exonic hg19 NA BI045792 Out-of-frame Inter-chr p15.3 111736 ChimerSeq ChiTaRs ChiTaRs LAMC1-TRIM5 LAMC1 chr1 183042393 TRIM5 chr11 5851834 Exonic hg19 NA BG998082 Out-of-frame Inter-chr q25.3 p15.4 111737 ChimerSeq ChiTaRs ChiTaRs MRPS22-SCML4 MRPS22 chr3 139063237 SCML4 chr6 108039851 Exonic hg19 NA BE045932 Out-of-frame Inter-chr q23 q21 Transcription factor 111738 ChimerSeq ChiTaRs ChiTaRs KIAA0922-SLC30A5 KIAA0922 chr4 154525531 SLC30A5 chr5 68425973 Exonic hg19 NA BC021232 Out-of-frame Inter-chr q31.3 q13.1 111739 ChimerSeq ChiTaRs ChiTaRs RAB14-UBP1 RAB14 chr9 123943369 UBP1 chr3 33478529 Exonic hg19 NA AW892042 Out-of-frame Inter-chr q33.2 p22.3 Transcription factor 111740 ChimerSeq ChiTaRs ChiTaRs NEXN-NEXN NEXN chr1 78395092 NEXN chr1 78395106 Exonic hg19 NA AW373642 Out-of-frame Intra-chr p31.1 p31.1 111741 ChimerSeq ChiTaRs ChiTaRs ARMC2-ARMC2 ARMC2 chr6 109175544 ARMC2 chr6 109197480 Exonic hg19 NA AW892942 Out-of-frame Intra-chr q21 q21 111742 ChimerSeq ChiTaRs ChiTaRs VPS26A-NIPBL VPS26A chr10 70930456 NIPBL chr5 36989263 Exonic hg19 NA BE072522 Out-of-frame Inter-chr q22.1 p13.2 111743 ChimerSeq ChiTaRs ChiTaRs SNX17-NFKBIZ SNX17 chr2 27599948 NFKBIZ chr3 101571756 Exonic hg19 NA BG938902 Out-of-frame Inter-chr p23.3 q12.3 111744 ChimerSeq ChiTaRs ChiTaRs CSTA-CSTA CSTA chr3 122060376 CSTA chr3 122044154 Exonic hg19 NA AW265472 Out-of-frame Intra-chr q21.1 q21.1 111745 ChimerSeq ChiTaRs ChiTaRs CDK6-KLC1 CDK6 chr7 92377348 KLC1 chr14 104152074 Exonic hg19 NA AW889192 Out-of-frame Inter-chr q21.2 CMGC:CDK Oncogene Tumor suppressor gene q32.33 111746 ChimerSeq ChiTaRs ChiTaRs HLA-G-BET1L HLA-G chr6 1231826 BET1L chr11 202924 Exonic hg19 NA BX648752 Out-of-frame Inter-chr p22.1 p15.5 111747 ChimerSeq ChiTaRs ChiTaRs SF3A3-SF3A3 SF3A3 chr1 38425842 SF3A3 chr1 38450379 Exonic hg19 NA BQ328602 Out-of-frame Intra-chr p34.3 p34.3 111748 ChimerSeq ChiTaRs ChiTaRs CAMK1D-LRRFIP2 CAMK1D chr10 12606720 LRRFIP2 chr3 37125234 Exonic hg19 NA BF229112 Out-of-frame Inter-chr p13 p22.2 111749 ChimerSeq ChiTaRs ChiTaRs IGSF21-LOC283624 IGSF21 chr1 18690340 LOC283624 chr14 21669685 Exonic hg19 NA BX951952 Out-of-frame Inter-chr p36.13 111750 ChimerSeq ChiTaRs ChiTaRs SLC33A1-SLC33A1 SLC33A1 chr3 155544652 SLC33A1 chr3 155544327 Exonic hg19 NA AA829202 Out-of-frame Intra-chr q25.31 q25.31 111751 ChimerSeq ChiTaRs ChiTaRs EXT1-FAM177A1 EXT1 chr8 118942709 FAM177A1 chr14 35551657 Exonic hg19 NA AK130402 Out-of-frame Inter-chr q24.11 Oncogene Tumor suppressor gene q13.2 111752 ChimerSeq ChiTaRs ChiTaRs DCTN1-SLC4A5 DCTN1 chr2 74593389 SLC4A5 chr2 74588283 Exonic hg19 NA BU620312 Out-of-frame Intra-chr p13.1 p13.1 111753 ChimerSeq ChiTaRs ChiTaRs NUP98-SRGAP2B NUP98 chr11 3781811 SRGAP2B chr1 144044035 Exonic hg19 NA AF133333 Out-of-frame Inter-chr p15.4 Oncogene Tumor suppressor gene q21.1 111754 ChimerSeq ChiTaRs ChiTaRs MTOR-MTOR MTOR chr1 11187093 MTOR chr1 11182129 Exonic hg19 NA BE830802 Out-of-frame Intra-chr p36.22 Oncogene p36.22 Oncogene 111755 ChimerSeq ChiTaRs ChiTaRs CCBL1-CCBL1 CCBL1 chr9 131643402 CCBL1 chr9 131640998 Exonic hg19 NA BF891052 Out-of-frame Intra-chr 111756 ChimerSeq ChiTaRs ChiTaRs VPS41-KLF12 VPS41 chr7 38764993 KLF12 chr13 74662984 Exonic hg19 NA BF821492 Out-of-frame Inter-chr p14.1 q22.1 Transcription factor 111757 ChimerSeq ChiTaRs ChiTaRs FAM168B-FAM168B FAM168B chr2 131806593 FAM168B chr2 131806278 Exonic hg19 NA BE872492 Out-of-frame Intra-chr q21.1 q21.1 111758 ChimerSeq ChiTaRs ChiTaRs SLC25A26-BGN SLC25A26 chr3 66436898 BGN chrX 152771406 Exonic hg19 NA BF930412 Out-of-frame Inter-chr q28 111759 ChimerSeq ChiTaRs ChiTaRs SOX6-DGKH SOX6 chr11 16594743 DGKH chr13 42681634 Exonic hg19 NA BF930562 Out-of-frame Inter-chr p15.2 Transcription factor q14.11 111760 ChimerSeq ChiTaRs ChiTaRs EHMT1-BRE EHMT1 chr9 140642401 BRE chr2 28455820 Exonic hg19 NA CK818072 Out-of-frame Inter-chr q34.3 111761 ChimerSeq ChiTaRs ChiTaRs TSN-TSN TSN chr2 122524869 TSN chr2 122524143 Exonic hg19 NA BM968532 Out-of-frame Intra-chr q14.3 q14.3 111762 ChimerSeq ChiTaRs ChiTaRs SYN1-SYN1 SYN1 chrX 47466395 SYN1 chrX 47435924 Exonic hg19 NA BF948432 Out-of-frame Intra-chr p11.23 p11.23 111763 ChimerSeq ChiTaRs ChiTaRs LOC100506207-LOC100506207 LOC100506207 chr6 8653592 LOC100506207 chr6 8653588 Exonic hg19 NA AA558162 Out-of-frame Intra-chr 111764 ChimerSeq ChiTaRs ChiTaRs FBXO32-FBXO32 FBXO32 chr8 124514852 FBXO32 chr8 124515558 Exonic hg19 NA AW373672 Out-of-frame Intra-chr q24.13 Tumor suppressor gene q24.13 Tumor suppressor gene 111765 ChimerSeq ChiTaRs ChiTaRs LMOD1-NPNT LMOD1 chr1 201867341 NPNT chr4 106858193 Exonic hg19 NA BE835052 Out-of-frame Inter-chr q32.1 q24 111766 ChimerSeq ChiTaRs ChiTaRs METTL24-METTL24 METTL24 chr6 110734665 METTL24 chr6 110713804 Exonic hg19 NA AX786392 Out-of-frame Intra-chr q21 q21 111767 ChimerSeq ChiTaRs ChiTaRs KIAA1217-EIF4A2 KIAA1217 chr10 24833314 EIF4A2 chr3 186507348 Exonic hg19 NA BQ355782 Out-of-frame Inter-chr p12.2 q27.3 111768 ChimerSeq ChiTaRs ChiTaRs FARS2-PI4KB FARS2 chr6 5622938 PI4KB chr1 151274372 Exonic hg19 NA AW889702 Out-of-frame Inter-chr p25.1 q21.3 111769 ChimerSeq ChiTaRs ChiTaRs DENND4C-DENND4C DENND4C chr9 19316837 DENND4C chr9 19305349 Exonic hg19 NA AA525272 Out-of-frame Intra-chr p22.1 p22.1 111770 ChimerSeq ChiTaRs ChiTaRs PARVA-PARVA PARVA chr11 12549572 PARVA chr11 12549574 Exonic hg19 NA BI253272 Out-of-frame Intra-chr p15.3 p15.3 111771 ChimerSeq ChiTaRs ChiTaRs HNRNPU-SNRNP25 HNRNPU chr1 245014611 SNRNP25 chr16 104960 Exonic hg19 NA AF289572 Out-of-frame Inter-chr q44 p13.3 111772 ChimerSeq ChiTaRs ChiTaRs PALM2-SOGA1 PALM2 chr9 112690869 SOGA1 chr20 35469985 Exonic hg19 NA BF992642 Out-of-frame Inter-chr q31.3 q11.23 111773 ChimerSeq ChiTaRs ChiTaRs PHACTR2-PHACTR2 PHACTR2 chr6 144093684 PHACTR2 chr6 144033291 Exonic hg19 NA CA418242 Out-of-frame Intra-chr q24.2 q24.2 111774 ChimerSeq ChiTaRs ChiTaRs FTX-FTX FTX chrX 73494727 FTX chrX 73494879 Exonic hg19 NA CN287042 Out-of-frame Intra-chr q13.2 q13.2 111775 ChimerSeq ChiTaRs ChiTaRs AHCTF1-GIGYF2 AHCTF1 chr1 247041194 GIGYF2 chr2 233681467 Exonic hg19 NA DB091102 Out-of-frame Inter-chr q44 Transcription factor q37.1 111776 ChimerSeq ChiTaRs ChiTaRs RORB-PISD RORB chr9 77209904 PISD chr22 32014731 Exonic hg19 NA BF996842 Out-of-frame Inter-chr q21.13 Transcription factor q12.2 111777 ChimerSeq ChiTaRs ChiTaRs CADPS-SIPA1L1 CADPS chr3 62474232 SIPA1L1 chr14 71947447 Exonic hg19 NA BF839582 Out-of-frame Inter-chr p14.2 q24.2 111778 ChimerSeq ChiTaRs ChiTaRs NOP58-RPL30 NOP58 chr2 203155926 RPL30 chr8 99054882 Exonic hg19 NA BI334582 Out-of-frame Inter-chr q33.1 q22.2 111779 ChimerSeq ChiTaRs ChiTaRs CLU-CLU CLU chr8 27457330 CLU chr8 27455656 Exonic hg19 NA BG896922 Out-of-frame Intra-chr p21.1 Tumor suppressor gene p21.1 Tumor suppressor gene 111780 ChimerSeq ChiTaRs ChiTaRs KIF4A-ITGB3 KIF4A chrX 69542274 ITGB3 chr17 45390262 Exonic hg19 NA AI655822 Out-of-frame Inter-chr q13.1 q21.32 Oncogene Tumor suppressor gene 111781 ChimerSeq ChiTaRs ChiTaRs GABBR2-UBE2H GABBR2 chr9 101056116 UBE2H chr7 129569478 Exonic hg19 NA BE766562 Out-of-frame Inter-chr q22.33 q32.2 111782 ChimerSeq ChiTaRs ChiTaRs MAN1A2-MAN1A2 MAN1A2 chr1 117963272 MAN1A2 chr1 117944806 Exonic hg19 NA BE832742 Out-of-frame Intra-chr p12 p12 111783 ChimerSeq ChiTaRs ChiTaRs ARRDC1-ARRDC1 ARRDC1 chr9 140506003 ARRDC1 chr9 140504283 Exonic hg19 NA AK025002 Out-of-frame Intra-chr q34.3 q34.3 111784 ChimerSeq ChiTaRs ChiTaRs ZNF687-ZNF687 ZNF687 chr1 151261651 ZNF687 chr1 151261726 Exonic hg19 NA AA639912 Out-of-frame Intra-chr q21.3 Transcription factor q21.3 Transcription factor 111785 ChimerSeq ChiTaRs ChiTaRs DIRAS2-DIRAS2 DIRAS2 chr9 93403504 DIRAS2 chr9 93403486 Exonic hg19 NA CA503302 Out-of-frame Intra-chr q22.2 q22.2 111786 ChimerSeq ChiTaRs ChiTaRs ST3GAL5-ST3GAL5 ST3GAL5 chr2 86106375 ST3GAL5 chr2 86106439 Exonic hg19 NA BF933062 Out-of-frame Intra-chr p11.2 p11.2 111787 ChimerSeq ChiTaRs ChiTaRs MSL2-MSL2 MSL2 chr3 135871332 MSL2 chr3 135869678 Exonic hg19 NA AW752782 Out-of-frame Intra-chr q22.3 q22.3 111788 ChimerSeq ChiTaRs ChiTaRs GMNN-GMNN GMNN chr6 24786327 GMNN chr6 24785923 Exonic hg19 NA CN478632 Out-of-frame Intra-chr p22.3 p22.3 111789 ChimerSeq ChiTaRs ChiTaRs KDM3B-KDM3B KDM3B chr5 137766066 KDM3B chr5 137766042 Exonic hg19 NA BF346562 Out-of-frame Intra-chr q31.2 Tumor suppressor gene q31.2 Tumor suppressor gene 111790 ChimerSeq ChiTaRs ChiTaRs IFRD1-FUT8 IFRD1 chr7 112115756 FUT8 chr14 66166618 Exonic hg19 NA AW361302 Out-of-frame Inter-chr q31.1 q23.3 111791 ChimerSeq ChiTaRs ChiTaRs NAA50-NAA50 NAA50 chr3 113439441 NAA50 chr3 113439024 Exonic hg19 NA AW582742 Out-of-frame Intra-chr q13.31 q13.31 111792 ChimerSeq ChiTaRs ChiTaRs HIVEP1-HIVEP1 HIVEP1 chr6 12162120 HIVEP1 chr6 12161867 Exonic hg19 NA AA603352 Out-of-frame Intra-chr p24.1 Tumor suppressor gene Transcription factor p24.1 Tumor suppressor gene Transcription factor 111793 ChimerSeq ChiTaRs ChiTaRs ADAMDEC1-ADAMDEC1 ADAMDEC1 chr8 24263223 ADAMDEC1 chr8 24263200 Exonic hg19 NA BP423822 Out-of-frame Intra-chr p21.2 p21.2 111794 ChimerSeq ChiTaRs ChiTaRs MARCKSL1-MARCKSL1 MARCKSL1 chr1 32799795 MARCKSL1 chr1 32799440 Exonic hg19 NA BF974652 Out-of-frame Intra-chr p35.1 p35.1 111795 ChimerSeq ChiTaRs ChiTaRs CDC42SE2-CDC42SE2 CDC42SE2 chr5 130693401 CDC42SE2 chr5 130692760 Exonic hg19 NA BE143612 Out-of-frame Intra-chr q31.1 q31.1 111796 ChimerSeq ChiTaRs ChiTaRs SPIDR-SPIDR SPIDR chr8 48650023 SPIDR chr8 48649476 Exonic hg19 NA BI054152 Out-of-frame Intra-chr q11.21 q11.21 111797 ChimerSeq ChiTaRs ChiTaRs ATP5J2-PTCD1-DHX33 ATP5J2-PTCD1 chr7 99054995 DHX33 chr17 5364376 Exonic hg19 NA AA580962 Out-of-frame Inter-chr q22.1 p13.2 111798 ChimerSeq ChiTaRs ChiTaRs MACF1-LOC728558 MACF1 chr1 39585022 LOC728558 chr10 97743888 Exonic hg19 NA BU561022 Out-of-frame Inter-chr p34.3 111799 ChimerSeq ChiTaRs ChiTaRs CTSL1-CTSL1 CTSL1 chr9 90346308 CTSL1 chr9 90346077 Exonic hg19 NA CB242452 Out-of-frame Intra-chr 111800 ChimerSeq ChiTaRs ChiTaRs IFITM1-CRIM1 IFITM1 chr11 315270 CRIM1 chr2 36686596 Exonic hg19 NA AI991482 Out-of-frame Inter-chr p15.5 Oncogene p22.2 111801 ChimerSeq ChiTaRs ChiTaRs SERP1-AKAP6 SERP1 chr3 150262041 AKAP6 chr14 32924255 Exonic hg19 NA BG388672 Out-of-frame Inter-chr q25.1 q12 111802 ChimerSeq ChiTaRs ChiTaRs SLC35B2-SLC35B2 SLC35B2 chr6 44222665 SLC35B2 chr6 44222920 Exonic hg19 NA BF351412 Out-of-frame Intra-chr p21.1 p21.1 111803 ChimerSeq ChiTaRs ChiTaRs SUMF1-SUMF1 SUMF1 chr3 4402901 SUMF1 chr3 4402952 Exonic hg19 NA AI127082 Out-of-frame Intra-chr p26.1 p26.1 111804 ChimerSeq ChiTaRs ChiTaRs HEATR2-MED13L HEATR2 chr7 777229 MED13L chr12 116578385 Exonic hg19 NA AW809452 Out-of-frame Inter-chr q24.21 111805 ChimerSeq ChiTaRs ChiTaRs BCL11A-SLC35A1 BCL11A chr2 60695925 SLC35A1 chr6 88221676 Exonic hg19 NA BF757732 Out-of-frame Inter-chr p16.1 Oncogene Transcription factor q15 111806 ChimerSeq ChiTaRs ChiTaRs RYBP-CNDP2 RYBP chr3 72475777 CNDP2 chr18 72168680 Exonic hg19 NA AA367702 Out-of-frame Inter-chr q22.3 Tumor suppressor gene 111807 ChimerSeq ChiTaRs ChiTaRs ZDHHC9-HABP4 ZDHHC9 chrX 128957697 HABP4 chr9 99250432 Exonic hg19 NA BF154572 Out-of-frame Inter-chr q26.1 q22.32 111808 ChimerSeq ChiTaRs ChiTaRs UTP15-EGLN3 UTP15 chr5 72877254 EGLN3 chr14 34410622 Exonic hg19 NA BQ299972 Out-of-frame Inter-chr q13.2 q13.1 Tumor suppressor gene 111809 ChimerSeq ChiTaRs ChiTaRs SMC5-SMC5 SMC5 chr9 72913101 SMC5 chr9 72895682 Exonic hg19 NA BE835242 Out-of-frame Intra-chr q21.12 q21.12 111810 ChimerSeq ChiTaRs ChiTaRs NFX1-DAAM1 NFX1 chr9 33294715 DAAM1 chr14 59662872 Exonic hg19 NA BG003552 Out-of-frame Inter-chr p13.3 Transcription factor q23.1 111811 ChimerSeq ChiTaRs ChiTaRs SLC39A13-SLC39A13 SLC39A13 chr11 47415706 SLC39A13 chr11 47428968 Exonic hg19 NA AW851732 Out-of-frame Intra-chr p11.2 p11.2 111812 ChimerSeq ChiTaRs ChiTaRs ALDH18A1-HGSNAT ALDH18A1 chr10 97373750 HGSNAT chr8 43056307 Exonic hg19 NA BG959752 Out-of-frame Inter-chr q24.1 p11.21 111813 ChimerSeq ChiTaRs ChiTaRs NFX1-C11orf80 NFX1 chr9 33344931 C11orf80 chr11 66607872 Exonic hg19 NA BF814712 Out-of-frame Inter-chr p13.3 Transcription factor q13.2 111814 ChimerSeq ChiTaRs ChiTaRs CREB3L2-CREB3L2 CREB3L2 chr7 137585856 CREB3L2 chr7 137569871 Exonic hg19 NA AA001672 Out-of-frame Intra-chr q33 Transcription factor q33 Transcription factor 111815 ChimerSeq ChiTaRs ChiTaRs GPX3-GPX3 GPX3 chr5 150407052 GPX3 chr5 150404898 Exonic hg19 NA BF878552 Out-of-frame Intra-chr q33.1 Tumor suppressor gene q33.1 Tumor suppressor gene 111816 ChimerSeq ChiTaRs ChiTaRs LAPTM5-ZBTB20 LAPTM5 chr1 31212214 ZBTB20 chr3 114342639 Exonic hg19 NA BE816402 Out-of-frame Inter-chr p35.2 q13.31 Transcription factor 111817 ChimerSeq ChiTaRs ChiTaRs POU2F1-POU2F1 POU2F1 chr1 167387052 POU2F1 chr1 167298280 Exonic hg19 NA DA179732 5'UTR-5'UTR Intra-chr q24.2 Transcription factor q24.2 Transcription factor 111818 ChimerSeq ChiTaRs ChiTaRs PHEX-PTPN3 PHEX chrX 22231851 PTPN3 chr9 112215806 Exonic hg19 NA CV374032 Out-of-frame Inter-chr p22.11 q31.3 111819 ChimerSeq ChiTaRs ChiTaRs PKP4-IL1RAPL1 PKP4 chr2 159530418 IL1RAPL1 chrX 29735453 Exonic hg19 NA BQ340532 Out-of-frame Inter-chr q24.1 p21.3 111820 ChimerSeq ChiTaRs ChiTaRs RPS4X-RPS4X RPS4X chrX 71492534 RPS4X chrX 71493212 Exonic hg19 NA BF446002 Out-of-frame Intra-chr q13.1 q13.1 111821 ChimerSeq ChiTaRs ChiTaRs FLOT1-TTC19 FLOT1 chr6 2027969 TTC19 chr17 15932006 Exonic hg19 NA AA481472 Out-of-frame Inter-chr p12 111822 ChimerSeq ChiTaRs ChiTaRs ENTPD1-ENTPD1 ENTPD1 chr10 97633514 ENTPD1 chr10 97594369 Exonic hg19 NA AV721912 Out-of-frame Intra-chr q24.1 q24.1 111823 ChimerSeq ChiTaRs ChiTaRs CCDC80-CCDC80 CCDC80 chr3 112328881 CCDC80 chr3 112359418 Exonic hg19 NA DA020732 Out-of-frame Intra-chr q13.2 q13.2 111824 ChimerSeq ChiTaRs ChiTaRs GOLT1A-IL10RB GOLT1A chr1 204174936 IL10RB chr21 34668487 Exonic hg19 NA AI983092 Out-of-frame Inter-chr q32.1 q22.11 111825 ChimerSeq ChiTaRs ChiTaRs WHSC1-FOXP1 WHSC1 chr4 1904867 FOXP1 chr3 71227176 Exonic hg19 NA U73662 Out-of-frame Inter-chr Oncogene p13 Oncogene Tumor suppressor gene Transcription factor 111826 ChimerSeq ChiTaRs ChiTaRs PFKP-STRAP PFKP chr10 3178956 STRAP chr12 16055870 Exonic hg19 NA BP431482 Out-of-frame Inter-chr p15.2 p12.3 111827 ChimerSeq ChiTaRs ChiTaRs RPRD2-MYH11 RPRD2 chr1 150443112 MYH11 chr16 15876254 Exonic hg19 NA BE827752 Out-of-frame Inter-chr q21.2 Oncogene 111828 ChimerSeq ChiTaRs ChiTaRs PTPN23-FLT4 PTPN23 chr3 47433183 FLT4 chr5 180029947 Exonic hg19 NA AA367982 Out-of-frame Inter-chr p21.31 Tumor suppressor gene q35.3 TK:VEGFR Oncogene 111829 ChimerSeq ChiTaRs ChiTaRs USP34-USP34 USP34 chr2 61417729 USP34 chr2 61417753 Exonic hg19 NA BF885872 Out-of-frame Intra-chr p15 p15 111830 ChimerSeq ChiTaRs ChiTaRs NR3C2-NR3C2 NR3C2 chr4 149000023 NR3C2 chr4 149000003 Exonic hg19 NA CA449982 Out-of-frame Intra-chr q31.23 Transcription factor q31.23 Transcription factor 111831 ChimerSeq ChiTaRs ChiTaRs TG-FNBP1 TG chr8 133918554 FNBP1 chr9 132803598 Exonic hg19 NA BG999952 Out-of-frame Inter-chr q24.22 q34.11 111832 ChimerSeq ChiTaRs ChiTaRs SPDYA-NUB1 SPDYA chr2 29066623 NUB1 chr7 151052851 Exonic hg19 NA AA412102 Out-of-frame Inter-chr p23.2 q36.1 111833 ChimerSeq ChiTaRs ChiTaRs MYO6-DSP MYO6 chr6 76484268 DSP chr6 7574460 Exonic hg19 NA AW993512 Out-of-frame Intra-chr q14.1 p24.3 Tumor suppressor gene 111834 ChimerSeq ChiTaRs ChiTaRs ACAD11-CBFA2T2 ACAD11 chr3 132378441 CBFA2T2 chr20 32236684 Exonic hg19 NA DA326652 Out-of-frame Inter-chr q22.1 q11.21 111835 ChimerSeq ChiTaRs ChiTaRs GIGYF2-GIGYF2 GIGYF2 chr2 233723134 GIGYF2 chr2 233723125 Exonic hg19 NA BI818732 Out-of-frame Intra-chr q37.1 q37.1 111836 ChimerSeq ChiTaRs ChiTaRs LOC100286793-NBPF14 LOC100286793 chr1 143744701 NBPF14 chr1 145004781 Exonic hg19 NA BC047032 Out-of-frame Intra-chr q21.2 111837 ChimerSeq ChiTaRs ChiTaRs GFPT1-EIF2S3 GFPT1 chr2 69560231 EIF2S3 chrX 24080551 Exonic hg19 NA AW580222 Out-of-frame Inter-chr p13.3 p22.11 111838 ChimerSeq ChiTaRs ChiTaRs NUP214-ARHGAP26 NUP214 chr9 134073222 ARHGAP26 chr5 142339348 Exonic hg19 NA BE837492 Out-of-frame Inter-chr q34.13 Oncogene q31.3 111839 ChimerSeq ChiTaRs ChiTaRs DBI-BCKDHB DBI chr2 120125818 BCKDHB chr6 81053432 Exonic hg19 NA BP391782 Out-of-frame Inter-chr q14.2 q14.1 111840 ChimerSeq ChiTaRs ChiTaRs BAI3-ALOXE3 BAI3 chr6 69582199 ALOXE3 chr17 7999219 Exonic hg19 NA AK122822 Out-of-frame Inter-chr p13.1 111841 ChimerSeq ChiTaRs ChiTaRs B4GALT1-NUDT8 B4GALT1 chr9 33110817 NUDT8 chr11 67397225 Exonic hg19 NA AI955342 Out-of-frame Inter-chr p21.1 q13.2 111842 ChimerSeq ChiTaRs ChiTaRs ERGIC1-GMDS ERGIC1 chr5 172379340 GMDS chr6 2142163 Exonic hg19 NA BG954532 Out-of-frame Inter-chr q35.1 p25.3 111843 ChimerSeq ChiTaRs ChiTaRs NKIRAS1-NKIRAS1 NKIRAS1 chr3 23962331 NKIRAS1 chr3 23961791 Exonic hg19 NA AW150992 Out-of-frame Intra-chr p24.2 p24.2 111844 ChimerSeq ChiTaRs ChiTaRs TRAPPC9-TRAPPC9 TRAPPC9 chr8 141137208 TRAPPC9 chr8 141136032 Exonic hg19 NA CV376062 Out-of-frame Intra-chr q24.3 q24.3 111845 ChimerSeq ChiTaRs ChiTaRs USP34-USP34 USP34 chr2 61417858 USP34 chr2 61417838 Exonic hg19 NA AW296692 Out-of-frame Intra-chr p15 p15 111846 ChimerSeq ChiTaRs ChiTaRs PCGF3-NEAT1 PCGF3 chr4 726354 NEAT1 chr11 65191343 Exonic hg19 NA BE929022 Out-of-frame Inter-chr p16.3 q13.1 111847 ChimerSeq ChiTaRs ChiTaRs COX7A2-TRBV20-1 COX7A2 chr6 75953511 TRBV20-1 chr16 2012052 Exonic hg19 NA BU594642 Out-of-frame Inter-chr q14.1 111848 ChimerSeq ChiTaRs ChiTaRs RREB1-WRN RREB1 chr6 7252213 WRN chr8 30989471 Exonic hg19 NA BU607882 3'UTR-CDS Inter-chr p24.3 Transcription factor p12 Oncogene 111849 ChimerSeq ChiTaRs ChiTaRs ZDHHC3-NOS2 ZDHHC3 chr3 44969038 NOS2 chr17 26218020 Exonic hg19 NA BF844302 Out-of-frame Inter-chr q11.2 111850 ChimerSeq ChiTaRs ChiTaRs IRAK1BP1-IRAK1BP1 IRAK1BP1 chr6 79649878 IRAK1BP1 chr6 79650458 Exonic hg19 NA BG574592 Out-of-frame Intra-chr q14.1 q14.1 111851 ChimerSeq ChiTaRs ChiTaRs TSPAN18-TSPAN18 TSPAN18 chr11 44952709 TSPAN18 chr11 44953585 Exonic hg19 NA BF813122 Out-of-frame Intra-chr p11.2 p11.2 111852 ChimerSeq ChiTaRs ChiTaRs KAT6A-CREBBP KAT6A chr8 41793518 CREBBP chr16 3926965 Exonic hg19 NA AJ315152 Out-of-frame Inter-chr p11.21 Oncogene p13.3 Oncogene Tumor suppressor gene KB Pub Seq+ 111853 ChimerSeq ChiTaRs ChiTaRs TSNAX-SLC25A3 TSNAX chr1 231700307 SLC25A3 chr12 98995210 Exonic hg19 NA BE738912 Out-of-frame Inter-chr q42.2 q23.1 111854 ChimerSeq ChiTaRs ChiTaRs C1orf116-CLNK C1orf116 chr1 207195372 CLNK chr4 10660219 Exonic hg19 NA AA225642 Out-of-frame Inter-chr q32.1 p16.1 111855 ChimerSeq ChiTaRs ChiTaRs KIF13B-HNRNPA2B1 KIF13B chr8 28977220 HNRNPA2B1 chr7 26231359 Exonic hg19 NA BQ370392 Out-of-frame Inter-chr p12 p15.2 111856 ChimerSeq ChiTaRs ChiTaRs MAST4-ABR MAST4 chr5 66340115 ABR chr17 1074397 Exonic hg19 NA BI011012 Out-of-frame Inter-chr q12.3 AGC:MAST p13.3 111857 ChimerSeq ChiTaRs ChiTaRs NUDCD3-PTCH1 NUDCD3 chr7 44530238 PTCH1 chr9 98239953 Exonic hg19 NA BF091762 Out-of-frame Inter-chr p13 q22.32 Oncogene Tumor suppressor gene 111858 ChimerSeq ChiTaRs ChiTaRs DEK-DEK DEK chr6 18224464 DEK chr6 18225169 Exonic hg19 NA BQ214682 Out-of-frame Intra-chr p22.3 Oncogene p22.3 Oncogene 111859 ChimerSeq ChiTaRs ChiTaRs ZMIZ1-ZMIZ1 ZMIZ1 chr10 81043402 ZMIZ1 chr10 81047439 Exonic hg19 NA AA864742 Out-of-frame Intra-chr q22.3 q22.3 111860 ChimerSeq ChiTaRs ChiTaRs TEAD1-WDR41 TEAD1 chr11 12960678 WDR41 chr5 76733290 Exonic hg19 NA BF753132 Out-of-frame Inter-chr p15.3 Transcription factor q14.1 111861 ChimerSeq ChiTaRs ChiTaRs FADS1-FADS1 FADS1 chr11 61568505 FADS1 chr11 61567747 Exonic hg19 NA BE789742 Out-of-frame Intra-chr q12.2 q12.2 111862 ChimerSeq ChiTaRs ChiTaRs RABGAP1L-CLIP1 RABGAP1L chr1 174784501 CLIP1 chr12 122830226 Exonic hg19 NA AW836212 Out-of-frame Inter-chr q25.1 q24.31 111863 ChimerSeq ChiTaRs ChiTaRs PLCL1-RNF216 PLCL1 chr2 199008346 RNF216 chr7 5814777 Exonic hg19 NA BG010702 Out-of-frame Inter-chr q33.1 p22.1 111864 ChimerSeq ChiTaRs ChiTaRs PEG10-PEG10 PEG10 chr7 94298581 PEG10 chr7 94298905 Exonic hg19 NA BF751302 Out-of-frame Intra-chr q21.3 q21.3 111865 ChimerSeq ChiTaRs ChiTaRs GNB2L1-GNB2L1 GNB2L1 chr5 180665170 GNB2L1 chr5 180663969 Exonic hg19 NA CF619142 Out-of-frame Intra-chr Tumor suppressor gene Tumor suppressor gene 111866 ChimerSeq ChiTaRs ChiTaRs MAML1-HNRNPUL1 MAML1 chr5 179164382 HNRNPUL1 chr19 41772617 Exonic hg19 NA AW833292 Out-of-frame Inter-chr q13.2 111867 ChimerSeq ChiTaRs ChiTaRs TMEM74-CTSZ TMEM74 chr8 109709377 CTSZ chr20 57570361 Exonic hg19 NA AW839802 Out-of-frame Inter-chr q23.1 q13.32 111868 ChimerSeq ChiTaRs ChiTaRs GFRA1-PLA2G2A GFRA1 chr10 117817887 PLA2G2A chr1 20304519 Exonic hg19 NA BQ326672 Out-of-frame Inter-chr q25.3 p36.13 Tumor suppressor gene 111869 ChimerSeq ChiTaRs ChiTaRs DDAH2-BAG1 DDAH2 chr6 3026266 BAG1 chr9 33264317 Exonic hg19 NA AW393642 Out-of-frame Inter-chr p13.3 111870 ChimerSeq ChiTaRs ChiTaRs MICB-MICB MICB chr6 2616442 MICB chr6 2617606 Exonic hg19 NA CA431962 Out-of-frame Intra-chr 111871 ChimerSeq ChiTaRs ChiTaRs HECW2-SBF2 HECW2 chr2 197326994 SBF2 chr11 10133695 Exonic hg19 NA CV416642 Out-of-frame Inter-chr q32.3 p15.4 111872 ChimerSeq ChiTaRs ChiTaRs ADAR-PLS3 ADAR chr1 154556082 PLS3 chrX 114864214 Exonic hg19 NA BE177612 Out-of-frame Inter-chr q21.3 q23 111873 ChimerSeq ChiTaRs ChiTaRs FLNB-FLNB FLNB chr3 58113662 FLNB chr3 58113162 Exonic hg19 NA BG992732 Out-of-frame Intra-chr p14.3 p14.3 111874 ChimerSeq ChiTaRs ChiTaRs MAF1-CSNK1D MAF1 chr8 145162514 CSNK1D chr17 80203189 Exonic hg19 NA CA449192 Out-of-frame Inter-chr q24.3 q25.3 111875 ChimerSeq ChiTaRs ChiTaRs PRPF19-PRPF19 PRPF19 chr11 60665654 PRPF19 chr11 60665639 Exonic hg19 NA AW373052 Out-of-frame Intra-chr q12.2 q12.2 111876 ChimerSeq ChiTaRs ChiTaRs NADK2-CMIP NADK2 chr5 36193313 CMIP chr16 81523759 Exonic hg19 NA AA581772 Out-of-frame Inter-chr p13.2 q23.2 111877 ChimerSeq ChiTaRs ChiTaRs ITPRIP-FAM171B ITPRIP chr10 106072123 FAM171B chr2 187585451 Exonic hg19 NA BE812272 Out-of-frame Inter-chr q25.1 q32.1 111878 ChimerSeq ChiTaRs ChiTaRs PITX1-PCNP PITX1 chr5 134364246 PCNP chr3 101295269 Exonic hg19 NA BM825172 Out-of-frame Inter-chr q31.1 Transcription factor q12.3 111879 ChimerSeq ChiTaRs ChiTaRs STAG1-HRH1 STAG1 chr3 136381318 HRH1 chr3 11302982 Exonic hg19 NA AW390202 Out-of-frame Intra-chr q22.3 p25.3 111880 ChimerSeq ChiTaRs ChiTaRs CCAR1-ONECUT1 CCAR1 chr10 70551540 ONECUT1 chr15 53064134 Exonic hg19 NA CB162622 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q21.3 Tumor suppressor gene Transcription factor 111881 ChimerSeq ChiTaRs ChiTaRs HNRNPA2B1-HNRNPA2B1 HNRNPA2B1 chr7 26231271 HNRNPA2B1 chr7 26231262 Exonic hg19 NA AA744342 Out-of-frame Intra-chr p15.2 p15.2 111882 ChimerSeq ChiTaRs ChiTaRs HACE1-C8orf74 HACE1 chr6 105180431 C8orf74 chr8 10543145 Exonic hg19 NA BY998920 Out-of-frame Inter-chr q16.3 Tumor suppressor gene p23.1 111883 ChimerSeq ChiTaRs ChiTaRs TIAM2-TMEM57 TIAM2 chr6 155174321 TMEM57 chr1 25824898 Exonic hg19 NA BI850472 Out-of-frame Inter-chr q25.2 p36.11 111884 ChimerSeq ChiTaRs ChiTaRs INTS5-CECR5 INTS5 chr11 62414902 CECR5 chr22 17618774 Exonic hg19 NA BI037652 Out-of-frame Inter-chr q12.3 111885 ChimerSeq ChiTaRs ChiTaRs TG-CTNNB1 TG chr8 133907588 CTNNB1 chr3 41279542 Exonic hg19 NA BI003062 Out-of-frame Inter-chr q24.22 p22.1 Oncogene 111886 ChimerSeq ChiTaRs ChiTaRs SET-MST1R SET chr9 131454279 MST1R chr3 49924891 Exonic hg19 NA BE932152 Out-of-frame Inter-chr q34.11 p21.31 Tumor suppressor gene 111887 ChimerSeq ChiTaRs ChiTaRs PPM1G-MPPE1 PPM1G chr2 27606858 MPPE1 chr18 11886924 Exonic hg19 NA AW013782 Out-of-frame Inter-chr p23.3 p11.21 111888 ChimerSeq ChiTaRs ChiTaRs PRRC2C-ZC3H13 PRRC2C chr1 171506612 ZC3H13 chr13 46543047 Exonic hg19 NA AW003072 Out-of-frame Inter-chr q24.3 q14.13 111889 ChimerSeq ChiTaRs ChiTaRs LPP-LPP LPP chr3 187920361 LPP chr3 187919748 Exonic hg19 NA BQ321082 Out-of-frame Intra-chr q27.3 Oncogene q27.3 Oncogene 111890 ChimerSeq ChiTaRs ChiTaRs POLN-PITPNC1 POLN chr4 2091801 PITPNC1 chr17 65479397 Exonic hg19 NA AW902492 Out-of-frame Inter-chr p16.3 q24.2 111891 ChimerSeq ChiTaRs ChiTaRs FBXO42-FBXO42 FBXO42 chr1 16622338 FBXO42 chr1 16622700 Exonic hg19 NA AW948862 Out-of-frame Intra-chr p36.13 p36.13 111892 ChimerSeq ChiTaRs ChiTaRs KIF3C-KIF3C KIF3C chr2 26150968 KIF3C chr2 26150198 Exonic hg19 NA BF529152 Out-of-frame Intra-chr p23.3 p23.3 111893 ChimerSeq ChiTaRs ChiTaRs VDAC3-ATP1A1 VDAC3 chr8 42263349 ATP1A1 chr1 116932260 Exonic hg19 NA BQ303322 Out-of-frame Inter-chr p11.21 p13.1 111894 ChimerSeq ChiTaRs ChiTaRs DKK3-DKK3 DKK3 chr11 11985664 DKK3 chr11 11985672 Exonic hg19 NA BQ640482 Out-of-frame Intra-chr p15.3 Tumor suppressor gene p15.3 Tumor suppressor gene 111895 ChimerSeq ChiTaRs ChiTaRs KLHL21-KLHL21 KLHL21 chr1 6652526 KLHL21 chr1 6652605 Exonic hg19 NA BE167362 Out-of-frame Intra-chr p36.31 p36.31 111896 ChimerSeq ChiTaRs ChiTaRs IMMP2L-PHLDB2 IMMP2L chr7 110990378 PHLDB2 chr3 111649024 Exonic hg19 NA BP394692 Out-of-frame Inter-chr q31.1 q13.2 111897 ChimerSeq ChiTaRs ChiTaRs TAF7-EPC2 TAF7 chr5 140700249 EPC2 chr2 149526741 Exonic hg19 NA BE837002 Out-of-frame Inter-chr q31.3 q23.1 111898 ChimerSeq ChiTaRs ChiTaRs CCDC80-ANKHD1 CCDC80 chr3 112564561 ANKHD1 chr5 139889741 Exonic hg19 NA BE707292 Out-of-frame Inter-chr q13.2 q31.3 111899 ChimerSeq ChiTaRs ChiTaRs GSDMD-GSDMD GSDMD chr8 144641997 GSDMD chr8 144640588 Exonic hg19 NA BG747422 Out-of-frame Intra-chr 111900 ChimerSeq ChiTaRs ChiTaRs LAD1-LAD1 LAD1 chr1 201351457 LAD1 chr1 201351810 Exonic hg19 NA AW389752 Out-of-frame Intra-chr q32.1 q32.1 111901 ChimerSeq ChiTaRs ChiTaRs PIM2-PIM2 PIM2 chrX 48772528 PIM2 chrX 48772023 Exonic hg19 NA AW364922 Out-of-frame Intra-chr p11.23 CAMK:PIM p11.23 CAMK:PIM 111902 ChimerSeq ChiTaRs ChiTaRs MLLT3-MLL MLLT3 chr9 20413766 MLL chr11 118359129 Exonic hg19 NA AY387662 Out-of-frame Inter-chr p21.3 q23.3 111903 ChimerSeq ChiTaRs ChiTaRs FLNA-WTAP FLNA chrX 153599726 WTAP chr6 160148129 Exonic hg19 NA AK127822 Out-of-frame Inter-chr q28 Tumor suppressor gene q25.3 111904 ChimerSeq ChiTaRs ChiTaRs ABLIM3-CDK14 ABLIM3 chr5 148638027 CDK14 chr7 90377049 Exonic hg19 NA BE178202 Out-of-frame Inter-chr q32 q21.13 111905 ChimerSeq ChiTaRs ChiTaRs PPP2CB-COL1A2 PPP2CB chr8 30648832 COL1A2 chr7 94045799 Exonic hg19 NA BF809982 Out-of-frame Inter-chr p12 Tumor suppressor gene q21.3 111906 ChimerSeq ChiTaRs ChiTaRs SCGB1A1-RAB27A SCGB1A1 chr11 62190667 RAB27A chr15 55496120 Exonic hg19 NA BU676932 Out-of-frame Inter-chr q12.3 q21.3 111907 ChimerSeq ChiTaRs ChiTaRs PHF17-PHF17 PHF17 chr4 129765396 PHF17 chr4 129764761 Exonic hg19 NA AW449032 Out-of-frame Intra-chr 111908 ChimerSeq ChiTaRs ChiTaRs BVES-CIDEC BVES chr6 105547328 CIDEC chr3 10005162 Exonic hg19 NA BC021072 Out-of-frame Inter-chr q21 p25.3 111909 ChimerSeq ChiTaRs ChiTaRs SPARC-NPLOC4 SPARC chr5 151042127 NPLOC4 chr17 79524285 Exonic hg19 NA AA426012 Out-of-frame Inter-chr q33.1 Tumor suppressor gene q25.3 111910 ChimerSeq ChiTaRs ChiTaRs PTPN12-PTPN12 PTPN12 chr7 77177235 PTPN12 chr7 77176697 Exonic hg19 NA CV409712 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q11.23 Tumor suppressor gene 111911 ChimerSeq ChiTaRs ChiTaRs SHFM1-TMEM55A SHFM1 chr7 96331448 TMEM55A chr8 92046729 Exonic hg19 NA BF904112 Out-of-frame Inter-chr q21.3 111912 ChimerSeq ChiTaRs ChiTaRs TTC37-MFSD4 TTC37 chr5 94808239 MFSD4 chr1 205570101 Exonic hg19 NA BE933612 Out-of-frame Inter-chr q15 111913 ChimerSeq ChiTaRs ChiTaRs NCOA1-NOVA1 NCOA1 chr2 24991843 NOVA1 chr14 27066721 Exonic hg19 NA BX099622 Out-of-frame Inter-chr p23.3 Oncogene Transcription factor q12 111914 ChimerSeq ChiTaRs ChiTaRs LINC00340-LINC00340 LINC00340 chr6 21782008 LINC00340 chr6 21781543 Exonic hg19 NA BX487262 Out-of-frame Intra-chr 111915 ChimerSeq ChiTaRs ChiTaRs ZNF322-SLC39A9 ZNF322 chr6 26658721 SLC39A9 chr14 69928231 Exonic hg19 NA AW889882 Out-of-frame Inter-chr p22.2 Transcription factor q24.1 111916 ChimerSeq ChiTaRs ChiTaRs PIGR-PIGR PIGR chr1 207104902 PIGR chr1 207101906 Exonic hg19 NA BF767812 Out-of-frame Intra-chr q32.1 q32.1 111917 ChimerSeq ChiTaRs ChiTaRs ABL1-NRXN2 ABL1 chr9 133717316 NRXN2 chr11 64374264 Exonic hg19 NA BM685192 Out-of-frame Inter-chr q34.12 TK:Abl Oncogene q13.1 111918 ChimerSeq ChiTaRs ChiTaRs PTBP2-ZNF609 PTBP2 chr1 97232493 ZNF609 chr15 64977850 Exonic hg19 NA BF742982 Out-of-frame Inter-chr p21.3 q22.31 Transcription factor 111919 ChimerSeq ChiTaRs ChiTaRs SSR1-PSMA1 SSR1 chr6 7281915 PSMA1 chr11 14526424 Exonic hg19 NA BP386202 Out-of-frame Inter-chr p24.3 p15.2 111920 ChimerSeq ChiTaRs ChiTaRs MMEL1-KIF1B MMEL1 chr1 2562536 KIF1B chr1 10436659 Exonic hg19 NA AA676612 Out-of-frame Intra-chr p36.22 Tumor suppressor gene 111921 ChimerSeq ChiTaRs ChiTaRs DMTN-PKN2 DMTN chr8 21929963 PKN2 chr1 89299434 Exonic hg19 NA BP417512 Out-of-frame Inter-chr p21.3 p22.2 AGC:PKN 111922 ChimerSeq ChiTaRs ChiTaRs HOMER1-EFNB3 HOMER1 chr5 78809144 EFNB3 chr17 7613903 Exonic hg19 NA BF935692 Out-of-frame Inter-chr q14.1 p13.1 111923 ChimerSeq ChiTaRs ChiTaRs LOC100505918-RPS6KA3 LOC100505918 chr1 168390164 RPS6KA3 chrX 20168037 Exonic hg19 NA BG487432 Out-of-frame Inter-chr p22.12 111924 ChimerSeq ChiTaRs ChiTaRs MIR29B2-MIR29B2 MIR29B2 chr1 207985789 MIR29B2 chr1 207977545 Exonic hg19 NA BF849882 Out-of-frame Intra-chr q32.2 q32.2 111925 ChimerSeq ChiTaRs ChiTaRs CHRNA2-CAPN3 CHRNA2 chr8 27336813 CAPN3 chr15 42699095 Exonic hg19 NA DA405532 5'UTR-5'UTR Inter-chr p21.2 q15.1 111926 ChimerSeq ChiTaRs ChiTaRs MCTP1-MCTP1 MCTP1 chr5 94256186 MCTP1 chr5 94248546 Exonic hg19 NA CB069182 Out-of-frame Intra-chr q15 q15 111927 ChimerSeq ChiTaRs ChiTaRs EPB41L5-EPB41L5 EPB41L5 chr2 120774710 EPB41L5 chr2 120771434 Exonic hg19 NA AK023922 Out-of-frame Intra-chr q14.2 q14.2 111928 ChimerSeq ChiTaRs ChiTaRs ZKSCAN1-ZKSCAN1 ZKSCAN1 chr7 99621110 ZKSCAN1 chr7 99621519 Exonic hg19 NA BE080522 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Transcription factor 111929 ChimerSeq ChiTaRs ChiTaRs MLL3-MLL3 MLL3 chr7 151832546 MLL3 chr7 151832648 Exonic hg19 NA BE762382 Out-of-frame Intra-chr Tumor suppressor gene Tumor suppressor gene 111930 ChimerSeq ChiTaRs ChiTaRs MIR548O2-C6orf106 MIR548O2 chr8 30105515 C6orf106 chr6 34659681 Exonic hg19 NA BG611302 Out-of-frame Inter-chr q11.23 p21.31 111931 ChimerSeq ChiTaRs ChiTaRs CENPO-KLF12 CENPO chr2 25022441 KLF12 chr13 74321196 Exonic hg19 NA AW976082 Out-of-frame Inter-chr p23.3 q22.1 Transcription factor 111932 ChimerSeq ChiTaRs ChiTaRs TTC37-RPL30 TTC37 chr5 94861196 RPL30 chr8 99053569 Exonic hg19 NA BG180512 Out-of-frame Inter-chr q15 q22.2 111933 ChimerSeq ChiTaRs ChiTaRs ZHX2-LOC401320 ZHX2 chr8 123986747 LOC401320 chr7 30605494 Exonic hg19 NA AW170022 Out-of-frame Inter-chr q24.13 Tumor suppressor gene Transcription factor 111934 ChimerSeq ChiTaRs ChiTaRs EIF5B-CCDC113 EIF5B chr2 99992883 CCDC113 chr16 58317310 Exonic hg19 NA CB243572 Out-of-frame Inter-chr q11.2 q21 111935 ChimerSeq ChiTaRs ChiTaRs KANK1-MCM3AP-AS1 KANK1 chr9 547438 MCM3AP-AS1 chr21 47655068 Exonic hg19 NA AW361372 Out-of-frame Inter-chr p24.3 Tumor suppressor gene q22.3 111936 ChimerSeq ChiTaRs ChiTaRs MTR-CCAR1 MTR chr1 237061603 CCAR1 chr10 70525663 Exonic hg19 NA AW841012 Out-of-frame Inter-chr q43 Oncogene q21.3 Tumor suppressor gene 111937 ChimerSeq ChiTaRs ChiTaRs HDGF-FOXRED1 HDGF chr1 156713569 FOXRED1 chr11 126141514 Exonic hg19 NA BF808622 Out-of-frame Inter-chr q23.1 q24.2 111938 ChimerSeq ChiTaRs ChiTaRs EMILIN1-EMILIN1 EMILIN1 chr2 27306667 EMILIN1 chr2 27305981 Exonic hg19 NA CN350362 Out-of-frame Intra-chr p23.3 p23.3 111939 ChimerSeq ChiTaRs ChiTaRs GPR137B-MFHAS1 GPR137B chr1 236374569 MFHAS1 chr8 8730986 Exonic hg19 NA AL832142 Out-of-frame Inter-chr q42.3 p23.1 111940 ChimerSeq ChiTaRs ChiTaRs ACTL6A-ACTL6A ACTL6A chr3 179298990 ACTL6A chr3 179305863 Exonic hg19 NA BE708502 Out-of-frame Intra-chr q26.33 q26.33 111941 ChimerSeq ChiTaRs ChiTaRs LRPPRC-LRPPRC LRPPRC chr2 44128368 LRPPRC chr2 44123774 Exonic hg19 NA CR743262 Out-of-frame Intra-chr p21 p21 111942 ChimerSeq ChiTaRs ChiTaRs ARPC1A-PRKAG1 ARPC1A chr7 98972236 PRKAG1 chr12 49397013 Exonic hg19 NA BM477142 Out-of-frame Inter-chr q22.1 q13.12 111943 ChimerSeq ChiTaRs ChiTaRs DPYD-COX5B DPYD chr1 98386590 COX5B chr2 98264565 Exonic hg19 NA BP319012 Out-of-frame Inter-chr p21.3 Oncogene q11.2 111944 ChimerSeq ChiTaRs ChiTaRs HNRNPH3-RDH11 HNRNPH3 chr10 70102028 RDH11 chr14 68145082 Exonic hg19 NA AI160852 Out-of-frame Inter-chr q21.3 q24.1 111945 ChimerSeq ChiTaRs ChiTaRs FPGS-FPGS FPGS chr9 130570585 FPGS chr9 130566642 Exonic hg19 NA BF772512 Out-of-frame Intra-chr q34.11 q34.11 111946 ChimerSeq ChiTaRs ChiTaRs MDS2-MALAT1 MDS2 chr1 23918977 MALAT1 chr11 65266617 Exonic hg19 NA CA446412 Out-of-frame Inter-chr p36.12 q13.1 111947 ChimerSeq ChiTaRs ChiTaRs ZCCHC6-ZCCHC6 ZCCHC6 chr9 88961395 ZCCHC6 chr9 88957990 Exonic hg19 NA BE080712 In-Frame Intra-chr q21.33 q21.33 111948 ChimerSeq ChiTaRs ChiTaRs ACTB-AGAP1 ACTB chr7 5568971 AGAP1 chr2 237015903 Exonic hg19 NA BE707882 Out-of-frame Inter-chr p22.1 q37.2 111949 ChimerSeq ChiTaRs ChiTaRs GNG12-GNG12 GNG12 chr1 68192661 GNG12 chr1 68192013 Exonic hg19 NA AW851172 Out-of-frame Intra-chr p31.3 p31.3 111950 ChimerSeq ChiTaRs ChiTaRs ARMC10-STX16 ARMC10 chr7 102740206 STX16 chr20 57241253 Exonic hg19 NA AI339072 Out-of-frame Inter-chr Tumor suppressor gene q13.32 111951 ChimerSeq ChiTaRs ChiTaRs COPG1-CPM COPG1 chr3 128996218 CPM chr12 69264163 Exonic hg19 NA AW889772 Out-of-frame Inter-chr q21.3 q15 111952 ChimerSeq ChiTaRs ChiTaRs BVES-LMTK2 BVES chr6 105581372 LMTK2 chr7 97819031 Exonic hg19 NA AF124512 Out-of-frame Inter-chr q21 q21.3 111953 ChimerSeq ChiTaRs ChiTaRs AFF2-AFF2 AFF2 chrX 147743654 AFF2 chrX 147744097 Exonic hg19 NA BF999372 Out-of-frame Intra-chr q28 q28 111954 ChimerSeq ChiTaRs ChiTaRs FN1-RNH1 FN1 chr2 216251614 RNH1 chr11 494515 Exonic hg19 NA BF029962 Out-of-frame Inter-chr q35 Oncogene Tumor suppressor gene 111955 ChimerSeq ChiTaRs ChiTaRs USP9X-USP9X USP9X chrX 41058695 USP9X chrX 41058406 Exonic hg19 NA BF094012 Out-of-frame Intra-chr p11.4 Oncogene p11.4 Oncogene 111956 ChimerSeq ChiTaRs ChiTaRs ROR1-SNAP25 ROR1 chr1 64286029 SNAP25 chr20 10287562 Exonic hg19 NA AW899942 Out-of-frame Inter-chr p31.3 TK:Ror p12.2 111957 ChimerSeq ChiTaRs ChiTaRs AMPD3-IER3 AMPD3 chr11 10472060 IER3 chr6 2043297 Exonic hg19 NA CD109332 Out-of-frame Inter-chr p15.4 Tumor suppressor gene 111958 ChimerSeq ChiTaRs ChiTaRs TTC21B-DOCK1 TTC21B chr2 166730595 DOCK1 chr10 128883621 Exonic hg19 NA AI811442 Out-of-frame Inter-chr q24.3 q26.2 111959 ChimerSeq ChiTaRs ChiTaRs MLL5-MLL5 MLL5 chr7 104753631 MLL5 chr7 104678920 Exonic hg19 NA AW592402 Out-of-frame Intra-chr 111960 ChimerSeq ChiTaRs ChiTaRs XPO1-XPO1 XPO1 chr2 61705298 XPO1 chr2 61705069 Exonic hg19 NA BM462202 Out-of-frame Intra-chr p15 Oncogene p15 Oncogene 111961 ChimerSeq ChiTaRs ChiTaRs NSD1-TBC1D1 NSD1 chr5 176638752 TBC1D1 chr4 38001672 Exonic hg19 NA BF369612 Out-of-frame Inter-chr q35.3 Oncogene p14 111962 ChimerSeq ChiTaRs ChiTaRs BASP1-BASP1 BASP1 chr5 17276760 BASP1 chr5 17276224 Exonic hg19 NA BU679952 Out-of-frame Intra-chr p15.1 Tumor suppressor gene p15.1 Tumor suppressor gene 111963 ChimerSeq ChiTaRs ChiTaRs NCOA2-NCOA2 NCOA2 chr8 71218749 NCOA2 chr8 71218447 Exonic hg19 NA AA829002 Out-of-frame Intra-chr q13.3 Oncogene Transcription factor q13.3 Oncogene Transcription factor 111964 ChimerSeq ChiTaRs ChiTaRs MAP7-MAP7 MAP7 chr6 136718116 MAP7 chr6 136717570 Exonic hg19 NA BM721392 Out-of-frame Intra-chr q23.3 q23.3 111965 ChimerSeq ChiTaRs ChiTaRs ELOVL1-ELOVL1 ELOVL1 chr1 43830315 ELOVL1 chr1 43832184 Exonic hg19 NA DA570042 Out-of-frame Intra-chr p34.2 p34.2 111966 ChimerSeq ChiTaRs ChiTaRs TTC1-TTC1 TTC1 chr5 159476577 TTC1 chr5 159437792 Exonic hg19 NA BU676132 Out-of-frame Intra-chr q33.3 q33.3 111967 ChimerSeq ChiTaRs ChiTaRs NUCKS1-WNK1 NUCKS1 chr1 205686678 WNK1 chr12 977835 Exonic hg19 NA AI917772 Out-of-frame Inter-chr q32.1 p13.33 111968 ChimerSeq ChiTaRs ChiTaRs LOC100132077-WBP2 LOC100132077 chr9 97109737 WBP2 chr17 73841780 Exonic hg19 NA CB143612 Out-of-frame Inter-chr q25.1 111969 ChimerSeq ChiTaRs ChiTaRs NADK2-TPRN NADK2 chr5 36238311 TPRN chr9 140093594 Exonic hg19 NA BF746922 Out-of-frame Inter-chr p13.2 q34.3 111970 ChimerSeq ChiTaRs ChiTaRs SH3PXD2A-ERC2 SH3PXD2A chr10 105402698 ERC2 chr3 55768866 Exonic hg19 NA BC046212 Out-of-frame Inter-chr q24.33 p14.3 111971 ChimerSeq ChiTaRs ChiTaRs LRP1B-ATP1A3 LRP1B chr2 142371085 ATP1A3 chr19 42471857 Exonic hg19 NA BF961292 Out-of-frame Inter-chr q22.2 Oncogene Tumor suppressor gene q13.2 111972 ChimerSeq ChiTaRs ChiTaRs CTBP2-CTBP2 CTBP2 chr10 126811438 CTBP2 chr10 126799559 Exonic hg19 NA BF331402 Out-of-frame Intra-chr q26.13 q26.13 111973 ChimerSeq ChiTaRs ChiTaRs DCAF8-DCAF8 DCAF8 chr1 160249182 DCAF8 chr1 160248772 Exonic hg19 NA AA632582 Out-of-frame Intra-chr q23.2 q23.2 111974 ChimerSeq ChiTaRs ChiTaRs RFC2-IL6ST RFC2 chr7 73646509 IL6ST chr5 55233225 Exonic hg19 NA BQ673042 Out-of-frame Inter-chr q11.23 q11.2 Oncogene 111975 ChimerSeq ChiTaRs ChiTaRs TMEM154-SLC39A11 TMEM154 chr4 153559676 SLC39A11 chr17 70831002 Exonic hg19 NA BI028092 Out-of-frame Inter-chr q31.3 q25.1 111976 ChimerSeq ChiTaRs ChiTaRs SATB1-SATB1 SATB1 chr3 18389629 SATB1 chr3 18389576 Exonic hg19 NA AA639242 Out-of-frame Intra-chr p24.3 Transcription factor p24.3 Transcription factor 111977 ChimerSeq ChiTaRs ChiTaRs ABI1-YME1L1 ABI1 chr10 27149876 YME1L1 chr10 27408306 Exonic hg19 NA DA016422 Out-of-frame Intra-chr p12.1 p12.1 111978 ChimerSeq ChiTaRs ChiTaRs ATL2-ATL2 ATL2 chr2 38550043 ATL2 chr2 38549702 Exonic hg19 NA AA525182 Out-of-frame Intra-chr p22.1 p22.1 111979 ChimerSeq ChiTaRs ChiTaRs PARG-NEFM PARG chr10 51562510 NEFM chr8 24774681 Exonic hg19 NA AI810822 Out-of-frame Inter-chr q11.23 p21.2 111980 ChimerSeq ChiTaRs ChiTaRs SF3B1-SF3B1 SF3B1 chr2 198256960 SF3B1 chr2 198257049 Exonic hg19 NA BU674702 Out-of-frame Intra-chr q33.1 Oncogene q33.1 Oncogene 111981 ChimerSeq ChiTaRs ChiTaRs FAM13A-AS1-FAM13A-AS1 FAM13A-AS1 chr4 89647847 FAM13A-AS1 chr4 89647856 Exonic hg19 NA AA665222 Out-of-frame Intra-chr q22.1 q22.1 Tumor suppressor gene 111982 ChimerSeq ChiTaRs ChiTaRs UBE2E1-UBE2E1 UBE2E1 chr3 23903708 UBE2E1 chr3 23898916 Exonic hg19 NA AK022062 Out-of-frame Intra-chr p24.2 p24.2 111983 ChimerSeq ChiTaRs ChiTaRs ERGIC1-MAU2 ERGIC1 chr5 172351114 MAU2 chr19 19445760 Exonic hg19 NA BI045862 Out-of-frame Inter-chr q35.1 p13.11 111984 ChimerSeq ChiTaRs ChiTaRs DYNC1I2-DYNC1I2 DYNC1I2 chr2 172549347 DYNC1I2 chr2 172544358 Exonic hg19 NA CA311072 Out-of-frame Intra-chr q31.1 q31.1 111985 ChimerSeq ChiTaRs ChiTaRs SDCBP-SDCBP SDCBP chr8 59495384 SDCBP chr8 59495338 Exonic hg19 NA CN277922 Out-of-frame Intra-chr q12.1 q12.1 111986 ChimerSeq ChiTaRs ChiTaRs MARCKS-MARCKS MARCKS chr6 114183751 MARCKS chr6 114183719 Exonic hg19 NA BG118012 Out-of-frame Intra-chr q21 Tumor suppressor gene q21 Tumor suppressor gene 111987 ChimerSeq ChiTaRs ChiTaRs BUB1-BUB1 BUB1 chr2 111395628 BUB1 chr2 111395409 Exonic hg19 NA BG403632 Out-of-frame Intra-chr q13 Other:BUB q13 Other:BUB 111988 ChimerSeq ChiTaRs ChiTaRs HK1-HK1 HK1 chr10 71050896 HK1 chr10 71050898 Exonic hg19 NA BE162082 Out-of-frame Intra-chr q22.1 q22.1 111989 ChimerSeq ChiTaRs ChiTaRs MAP4K4-ASH1L MAP4K4 chr2 102456351 ASH1L chr1 155451874 Exonic hg19 NA BE929112 Out-of-frame Inter-chr q11.2 q22 Transcription factor 111990 ChimerSeq ChiTaRs ChiTaRs ACSL3-MKI67IP ACSL3 chr2 223773832 MKI67IP chr2 122488497 Exonic hg19 NA BQ343112 Out-of-frame Intra-chr q36.1 111991 ChimerSeq ChiTaRs ChiTaRs SQSTM1-SQSTM1 SQSTM1 chr5 179264248 SQSTM1 chr5 179264010 Exonic hg19 NA AA071142 Out-of-frame Intra-chr q35.3 q35.3 111992 ChimerSeq ChiTaRs ChiTaRs RBM17-FSIP2 RBM17 chr10 6148174 FSIP2 chr2 186678427 Exonic hg19 NA BE704322 Out-of-frame Inter-chr p15.1 q32.1 111993 ChimerSeq ChiTaRs ChiTaRs PSAP-PSAP PSAP chr10 73579337 PSAP chr10 73577100 Exonic hg19 NA BE698722 Out-of-frame Intra-chr q22.1 q22.1 111994 ChimerSeq ChiTaRs ChiTaRs HEATR5B-TBL1X HEATR5B chr2 37244584 TBL1X chrX 9596838 Exonic hg19 NA AW993932 Out-of-frame Inter-chr p22.2 p22.31 111995 ChimerSeq ChiTaRs ChiTaRs RAB14-ZHX2 RAB14 chr9 123957597 ZHX2 chr8 123937539 Exonic hg19 NA CV322242 Out-of-frame Inter-chr q33.2 q24.13 Tumor suppressor gene Transcription factor 111996 ChimerSeq ChiTaRs ChiTaRs LOC100129148-PSD4 LOC100129148 chr7 139110242 PSD4 chr2 113937903 Exonic hg19 NA BU754552 Out-of-frame Inter-chr q14.1 111997 ChimerSeq ChiTaRs ChiTaRs SCN2A-KDM2B SCN2A chr2 166179786 KDM2B chr12 121867858 Exonic hg19 NA DA224792 Out-of-frame Inter-chr q24.3 q24.31 Transcription factor 111998 ChimerSeq ChiTaRs ChiTaRs HSP90AB1-HSP90AB1 HSP90AB1 chr6 44218296 HSP90AB1 chr6 44218616 Exonic hg19 NA BF918492 Out-of-frame Intra-chr p21.1 Oncogene p21.1 Oncogene 111999 ChimerSeq ChiTaRs ChiTaRs EIF4G2-EIF4G2 EIF4G2 chr11 10827587 EIF4G2 chr11 10822278 Exonic hg19 NA AW367062 Out-of-frame Intra-chr p15.4 p15.4 112000 ChimerSeq ChiTaRs ChiTaRs DCP1A-CSH2 DCP1A chr3 53324408 CSH2 chr17 61949937 Exonic hg19 NA AA368822 Out-of-frame Inter-chr p21.1 q23.3 112001 ChimerSeq ChiTaRs ChiTaRs DTX3L-NFXL1 DTX3L chr3 122293842 NFXL1 chr4 47857944 Exonic hg19 NA BE715922 Out-of-frame Inter-chr q21.1 p12 Transcription factor 112002 ChimerSeq ChiTaRs ChiTaRs CSRNP1-CSRNP1 CSRNP1 chr3 39184906 CSRNP1 chr3 39184910 Exonic hg19 NA BI005822 Out-of-frame Intra-chr p22.2 Tumor suppressor gene Transcription factor p22.2 Tumor suppressor gene Transcription factor 112003 ChimerSeq ChiTaRs ChiTaRs ACVR1-SGCD ACVR1 chr2 158695226 SGCD chr5 155275069 Exonic hg19 NA BF873192 Out-of-frame Inter-chr q24.1 q33.2 112004 ChimerSeq ChiTaRs ChiTaRs VILL-MAFF VILL chr3 38034713 MAFF chr22 38611618 Exonic hg19 NA BF736162 Out-of-frame Inter-chr p22.2 q13.1 Transcription factor 112005 ChimerSeq ChiTaRs ChiTaRs ATXN1-C20orf26 ATXN1 chr6 16366762 C20orf26 chr20 20316807 Exonic hg19 NA BF929602 Out-of-frame Inter-chr p22.3 112006 ChimerSeq ChiTaRs ChiTaRs WDR26-PPAP2B WDR26 chr1 224591051 PPAP2B chr1 57031108 Exonic hg19 NA AK001092 Out-of-frame Intra-chr q42.12 112007 ChimerSeq ChiTaRs ChiTaRs GNL3-GNL3 GNL3 chr3 52721385 GNL3 chr3 52721600 Exonic hg19 NA BF826182 Out-of-frame Intra-chr p21.1 p21.1 112008 ChimerSeq ChiTaRs ChiTaRs PTDSS1-PTDSS1 PTDSS1 chr8 97346780 PTDSS1 chr8 97346007 Exonic hg19 NA BE677852 Out-of-frame Intra-chr q22.1 q22.1 112009 ChimerSeq ChiTaRs ChiTaRs GANAB-GANAB GANAB chr11 62393248 GANAB chr11 62394517 Exonic hg19 NA BF987702 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q12.3 Tumor suppressor gene 112010 ChimerSeq ChiTaRs ChiTaRs FSTL1-GPCPD1 FSTL1 chr3 120114050 GPCPD1 chr20 5542846 Exonic hg19 NA BE763222 Out-of-frame Inter-chr q13.33 p12.3 112011 ChimerSeq ChiTaRs ChiTaRs LRRC15-ZBTB38 LRRC15 chr3 194076698 ZBTB38 chr3 141137645 Exonic hg19 NA BE072822 Out-of-frame Intra-chr q29 q23 Transcription factor 112012 ChimerSeq ChiTaRs ChiTaRs RAD21-RAD21 RAD21 chr8 117859228 RAD21 chr8 117864253 Exonic hg19 NA BI048002 Out-of-frame Intra-chr q24.11 q24.11 112013 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-TTR INS-IGF2 chr11 2182120 TTR chr18 29171854 Exonic hg19 NA CA773572 Out-of-frame Inter-chr p15.5 q12.1 Oncogene 112014 ChimerSeq ChiTaRs ChiTaRs ERBB2IP-SYNPO2L ERBB2IP chr5 65245823 SYNPO2L chr10 75405276 Exonic hg19 NA AF086522 Out-of-frame Inter-chr q22.2 112015 ChimerSeq ChiTaRs ChiTaRs RALGDS-RALGDS RALGDS chr9 135982524 RALGDS chr9 135983374 Exonic hg19 NA DA570172 In-Frame Intra-chr q34.2 Oncogene q34.2 Oncogene 112016 ChimerSeq ChiTaRs ChiTaRs DNAJB9-TPP1 DNAJB9 chr7 108214305 TPP1 chr11 6634997 Exonic hg19 NA AA368502 Out-of-frame Inter-chr q31.1 p15.4 112017 ChimerSeq ChiTaRs ChiTaRs HTT-FASN HTT chr4 3243805 FASN chr17 80036843 Exonic hg19 NA BM710952 Out-of-frame Inter-chr p16.3 q25.3 112018 ChimerSeq ChiTaRs ChiTaRs PPA1-TMEM50B PPA1 chr10 71969331 TMEM50B chr21 34822236 Exonic hg19 NA BU570352 Out-of-frame Inter-chr q22.1 112019 ChimerSeq ChiTaRs ChiTaRs GNL3L-GNL3L GNL3L chrX 54589047 GNL3L chrX 54589512 Exonic hg19 NA AI700532 Out-of-frame Intra-chr p11.22 p11.22 112020 ChimerSeq ChiTaRs ChiTaRs SYN1-GAB1 SYN1 chrX 47431866 GAB1 chr4 144285231 Exonic hg19 NA AW897752 Out-of-frame Inter-chr p11.23 q31.21 112021 ChimerSeq ChiTaRs ChiTaRs CA13-CA13 CA13 chr8 86276224 CA13 chr8 86275891 Exonic hg19 NA BE162382 Out-of-frame Intra-chr q21.2 q21.2 112022 ChimerSeq ChiTaRs ChiTaRs AP1S1-AP1S1 AP1S1 chr7 100800768 AP1S1 chr7 100800740 Exonic hg19 NA BG819332 Out-of-frame Intra-chr q22.1 q22.1 112023 ChimerSeq ChiTaRs ChiTaRs GLUL-GLUL GLUL chr1 182353204 GLUL chr1 182352944 Exonic hg19 NA BF988852 Out-of-frame Intra-chr q25.3 q25.3 112024 ChimerSeq ChiTaRs ChiTaRs BNIP3L-ABHD14B BNIP3L chr8 26268021 ABHD14B chr3 52002905 Exonic hg19 NA BQ355682 Out-of-frame Inter-chr p21.2 Tumor suppressor gene p21.2 112025 ChimerSeq ChiTaRs ChiTaRs F2R-SERINC3 F2R chr5 76031595 SERINC3 chr20 43127276 Exonic hg19 NA BE221242 3'UTR-3'UTR Inter-chr q13.3 q13.12 112026 ChimerSeq ChiTaRs ChiTaRs PRICKLE4-GAPDH PRICKLE4 chr6 41757469 GAPDH chr12 6647011 Exonic hg19 NA AJ711772 Out-of-frame Inter-chr p21.1 p13.31 112027 ChimerSeq ChiTaRs ChiTaRs CNTLN-CNTLN CNTLN chr9 17168620 CNTLN chr9 17167501 Exonic hg19 NA BX109042 Out-of-frame Intra-chr p22.2 p22.2 112028 ChimerSeq ChiTaRs ChiTaRs SHROOM2-ADNP SHROOM2 chrX 9808068 ADNP chr20 49519223 Exonic hg19 NA BE148732 Out-of-frame Inter-chr p22.2 q13.13 Transcription factor 112029 ChimerSeq ChiTaRs ChiTaRs RHOBTB2-STK40 RHOBTB2 chr8 22877951 STK40 chr1 36823513 Exonic hg19 NA BF445312 Out-of-frame Inter-chr p21.3 Tumor suppressor gene p34.3 112030 ChimerSeq ChiTaRs ChiTaRs TBL1XR1-ZBTB4 TBL1XR1 chr3 176792636 ZBTB4 chr17 7377169 Exonic hg19 NA AJ707222 Out-of-frame Inter-chr q26.32 Tumor suppressor gene Transcription factor 112031 ChimerSeq ChiTaRs ChiTaRs MEGF8-MEGF8 MEGF8 chr6 33665400 MEGF8 chr6 33665458 Exonic hg19 NA BU607742 Out-of-frame Intra-chr q13.2 q13.2 112032 ChimerSeq ChiTaRs ChiTaRs TGOLN2-KYNU TGOLN2 chr2 85548146 KYNU chr2 143725826 Exonic hg19 NA BF997792 Out-of-frame Intra-chr p11.2 q22.2 112033 ChimerSeq ChiTaRs ChiTaRs SLC35F3-KXD1 SLC35F3 chr1 234293335 KXD1 chr19 18677943 Exonic hg19 NA BG196712 Out-of-frame Inter-chr q42.2 p13.11 112034 ChimerSeq ChiTaRs ChiTaRs SLC25A37-MLF2 SLC25A37 chr8 23404696 MLF2 chr12 6861114 Exonic hg19 NA AA978092 Out-of-frame Inter-chr p21.2 p13.31 112035 ChimerSeq ChiTaRs ChiTaRs GCG-GCG GCG chr2 163000677 GCG chr2 162999392 Exonic hg19 NA AW582982 Out-of-frame Intra-chr q24.2 q24.2 112036 ChimerSeq ChiTaRs ChiTaRs GRHPR-PNO1 GRHPR chr9 37432813 PNO1 chr2 68401890 Exonic hg19 NA CA414232 Out-of-frame Inter-chr p13.2 p14 112037 ChimerSeq ChiTaRs ChiTaRs CRY2-CRY2 CRY2 chr11 45893722 CRY2 chr11 45893708 Exonic hg19 NA BI004402 Out-of-frame Intra-chr p11.2 p11.2 112038 ChimerSeq ChiTaRs ChiTaRs RAP2C-RAP2C RAP2C chrX 131338680 RAP2C chrX 131338340 Exonic hg19 NA BQ314972 Out-of-frame Intra-chr q26.2 q26.2 112039 ChimerSeq ChiTaRs ChiTaRs STAR-STAR STAR chr8 38008570 STAR chr8 38006158 Exonic hg19 NA DA569262 5'UTR-CDS Intra-chr p11.23 Tumor suppressor gene p11.23 Tumor suppressor gene 112040 ChimerSeq ChiTaRs ChiTaRs GPR156-GPR156 GPR156 chr3 119963009 GPR156 chr3 119880056 Exonic hg19 NA AB209362 Out-of-frame Intra-chr q13.33 q13.33 112041 ChimerSeq ChiTaRs ChiTaRs CD44-CD44 CD44 chr11 35252874 CD44 chr11 35252927 Exonic hg19 NA AW376462 Out-of-frame Intra-chr p13 Oncogene Tumor suppressor gene p13 Oncogene Tumor suppressor gene 112042 ChimerSeq ChiTaRs ChiTaRs SDHB-SDHB SDHB chr1 17349187 SDHB chr1 17349199 Exonic hg19 NA BU608192 Out-of-frame Intra-chr p36.13 Oncogene Tumor suppressor gene p36.13 Oncogene Tumor suppressor gene 112043 ChimerSeq ChiTaRs ChiTaRs GGCT-GGCT GGCT chr7 30544204 GGCT chr7 30544184 Exonic hg19 NA BF756422 In-Frame Intra-chr p14.3 p14.3 112044 ChimerSeq ChiTaRs ChiTaRs LSAMP-LSAMP LSAMP chr3 115915126 LSAMP chr3 115914788 Exonic hg19 NA CV357692 Out-of-frame Intra-chr q13.31 Tumor suppressor gene q13.31 Tumor suppressor gene 112045 ChimerSeq ChiTaRs ChiTaRs RPS6-NARS2 RPS6 chr9 19379509 NARS2 chr11 78277177 Exonic hg19 NA BQ378142 3'UTR-CDS Inter-chr p22.1 q14.1 112046 ChimerSeq ChiTaRs ChiTaRs ADCY8-DNAJC14 ADCY8 chr8 131890902 DNAJC14 chr12 56216172 Exonic hg19 NA BQ345242 Out-of-frame Inter-chr q24.22 q13.2 112047 ChimerSeq ChiTaRs ChiTaRs FBXL4-APBA2 FBXL4 chr6 99347218 APBA2 chr15 29368266 Exonic hg19 NA BF885322 Out-of-frame Inter-chr q16.2 112048 ChimerSeq ChiTaRs ChiTaRs SSU72-PCBP3 SSU72 chr1 1479309 PCBP3 chr21 47352172 Exonic hg19 NA BF818292 Out-of-frame Inter-chr p36.33 q22.3 112049 ChimerSeq ChiTaRs ChiTaRs TKT-TKT TKT chr3 53265462 TKT chr3 53260779 Exonic hg19 NA BG488822 Out-of-frame Intra-chr p21.1 Tumor suppressor gene p21.1 Tumor suppressor gene 112050 ChimerSeq ChiTaRs ChiTaRs SF3B1-SF3B1 SF3B1 chr2 198256763 SF3B1 chr2 198256714 Exonic hg19 NA AI174532 Out-of-frame Intra-chr q33.1 Oncogene q33.1 Oncogene 112051 ChimerSeq ChiTaRs ChiTaRs GRSF1-ZSWIM6 GRSF1 chr4 71686177 ZSWIM6 chr5 60759175 Exonic hg19 NA BI061722 Out-of-frame Inter-chr q13.3 q12.1 112052 ChimerSeq ChiTaRs ChiTaRs TUBB-FAM149B1 TUBB chr6 2024848 FAM149B1 chr10 74928409 Exonic hg19 NA BG178522 Out-of-frame Inter-chr q22.2 112053 ChimerSeq ChiTaRs ChiTaRs PPP1CB-PPP1CB PPP1CB chr2 29004706 PPP1CB chr2 29016845 Exonic hg19 NA BE170792 Out-of-frame Intra-chr p23.2 p23.2 112054 ChimerSeq ChiTaRs ChiTaRs PHF15-PLOD3 PHF15 chr5 133917433 PLOD3 chr7 100861002 Exonic hg19 NA BE276632 Out-of-frame Inter-chr q22.1 112055 ChimerSeq ChiTaRs ChiTaRs SUB1-HNRNPA2B1 SUB1 chr5 32597105 HNRNPA2B1 chr7 26236997 Exonic hg19 NA AW373752 Out-of-frame Inter-chr p13.3 p15.2 112056 ChimerSeq ChiTaRs ChiTaRs RAD21-RAD21 RAD21 chr8 117859228 RAD21 chr8 117864187 Exonic hg19 NA BI048052 Out-of-frame Intra-chr q24.11 q24.11 112057 ChimerSeq ChiTaRs ChiTaRs MECOM-RAB7A MECOM chr3 168801448 RAB7A chr3 128490515 Exonic hg19 NA BQ312732 Out-of-frame Intra-chr q26.2 Transcription factor q21.3 Tumor suppressor gene 112058 ChimerSeq ChiTaRs ChiTaRs CANX-KDM5B CANX chr5 179156146 KDM5B chr1 202712054 Exonic hg19 NA BG009982 Out-of-frame Inter-chr q32.1 Transcription factor 112059 ChimerSeq ChiTaRs ChiTaRs RPS4Y1-RPS4Y1 RPS4Y1 chrY 2715654 RPS4Y1 chrY 2715297 Exonic hg19 NA BF810102 Out-of-frame Intra-chr p11.2 p11.2 112060 ChimerSeq ChiTaRs ChiTaRs NFKBIZ-RGS19 NFKBIZ chr3 101572065 RGS19 chr20 62704534 Exonic hg19 NA BU963542 CDS-3'UTR Inter-chr q12.3 q13.33 112061 ChimerSeq ChiTaRs ChiTaRs KIAA1549-KIAA1549 KIAA1549 chr7 138648465 KIAA1549 chr7 138653233 Exonic hg19 NA BQ343712 Out-of-frame Intra-chr q34 q34 112062 ChimerSeq ChiTaRs ChiTaRs IQSEC1-COMT IQSEC1 chr3 12942535 COMT chr22 19946481 Exonic hg19 NA BG259212 Out-of-frame Inter-chr p25.2 q11.21 112063 ChimerSeq ChiTaRs ChiTaRs KDM5B-KDM5B KDM5B chr1 202740413 KDM5B chr1 202738858 Exonic hg19 NA CV330182 Out-of-frame Intra-chr q32.1 Transcription factor q32.1 Transcription factor 112064 ChimerSeq ChiTaRs ChiTaRs IGSF9-IGSF9 IGSF9 chr1 159897093 IGSF9 chr1 159897128 Exonic hg19 NA BQ355642 Out-of-frame Intra-chr q23.2 q23.2 112065 ChimerSeq ChiTaRs ChiTaRs KIAA1804-KIAA1804 KIAA1804 chr1 233494008 KIAA1804 chr1 233494155 Exonic hg19 NA AA757542 Out-of-frame Intra-chr 112066 ChimerSeq ChiTaRs ChiTaRs PHEX-ANK3 PHEX chrX 22100711 ANK3 chr10 62484741 Exonic hg19 NA BF814582 Out-of-frame Inter-chr p22.11 q21.2 112067 ChimerSeq ChiTaRs ChiTaRs LRCH3-EIF2AK4 LRCH3 chr3 197605556 EIF2AK4 chr15 40325451 Exonic hg19 NA AW389992 Out-of-frame Inter-chr q29 q15.1 112068 ChimerSeq ChiTaRs ChiTaRs ABCD3-GNB2L1 ABCD3 chr1 94944120 GNB2L1 chr5 180665005 Exonic hg19 NA CD358262 Out-of-frame Inter-chr p21.3 Tumor suppressor gene 112069 ChimerSeq ChiTaRs ChiTaRs MGEA5-MGEA5 MGEA5 chr10 103557507 MGEA5 chr10 103557243 Exonic hg19 NA BQ337632 Out-of-frame Intra-chr q24.32 q24.32 112070 ChimerSeq ChiTaRs ChiTaRs CTNNA1-PTPRD CTNNA1 chr5 138268390 PTPRD chr9 8487070 Exonic hg19 NA BE715152 Out-of-frame Inter-chr q31.2 Oncogene Oncogene Tumor suppressor gene 112071 ChimerSeq ChiTaRs ChiTaRs TPST1-TPST1 TPST1 chr7 65705943 TPST1 chr7 65670470 Exonic hg19 NA AA453212 Out-of-frame Intra-chr q11.21 q11.21 112072 ChimerSeq ChiTaRs ChiTaRs TXLNA-TXLNA TXLNA chr1 32663261 TXLNA chr1 32650131 Exonic hg19 NA BF850082 Out-of-frame Intra-chr p35.2 p35.2 112073 ChimerSeq ChiTaRs ChiTaRs CNKSR3-SBSN CNKSR3 chr6 154799795 SBSN chr19 36018209 Exonic hg19 NA BF827872 Out-of-frame Inter-chr q25.2 q13.12 112074 ChimerSeq ChiTaRs ChiTaRs RMND5B-RMND5B RMND5B chr5 177560451 RMND5B chr5 177559389 Exonic hg19 NA AA397442 Out-of-frame Intra-chr q35.3 q35.3 112075 ChimerSeq ChiTaRs ChiTaRs SIKE1-SIKE1 SIKE1 chr1 115322582 SIKE1 chr1 115322668 Exonic hg19 NA BQ187652 Out-of-frame Intra-chr p13.2 p13.2 112076 ChimerSeq ChiTaRs ChiTaRs TPM3-SEC24D TPM3 chr1 154158968 SEC24D chr4 119643998 Exonic hg19 NA AW853022 Out-of-frame Inter-chr q21.3 q26 112077 ChimerSeq ChiTaRs ChiTaRs RHBDD2-PDE6D RHBDD2 chr7 75518244 PDE6D chr2 232597140 Exonic hg19 NA BC004322 3'UTR-3'UTR Inter-chr q11.23 q37.1 112078 ChimerSeq ChiTaRs ChiTaRs TP63-MVK TP63 chr3 189598181 MVK chr12 110034441 Exonic hg19 NA BG698692 Out-of-frame Inter-chr q28 Tumor suppressor gene Transcription factor q24.11 112079 ChimerSeq ChiTaRs ChiTaRs RASA1-WNT5A RASA1 chr5 86632893 WNT5A chr3 55499748 Exonic hg19 NA BG434742 Out-of-frame Inter-chr q14.3 p14.3 Tumor suppressor gene 112080 ChimerSeq ChiTaRs ChiTaRs SPOCK1-COPA SPOCK1 chr5 136311531 COPA chr1 160259908 Exonic hg19 NA BF832762 Out-of-frame Inter-chr q31.2 q23.2 112081 ChimerSeq ChiTaRs ChiTaRs CAMSAP2-MCCC1 CAMSAP2 chr1 200776570 MCCC1 chr3 182733257 Exonic hg19 NA AW379082 Out-of-frame Inter-chr q32.1 q27.1 112082 ChimerSeq ChiTaRs ChiTaRs NUCKS1-WNK1 NUCKS1 chr1 205686678 WNK1 chr12 977635 Exonic hg19 NA BF057202 Out-of-frame Inter-chr q32.1 p13.33 112083 ChimerSeq ChiTaRs ChiTaRs SETD2-F3 SETD2 chr3 47119070 F3 chr1 94995256 Exonic hg19 NA C02742 Out-of-frame Inter-chr p21.31 Oncogene Tumor suppressor gene p21.3 112084 ChimerSeq ChiTaRs ChiTaRs INTS1-INTS1 INTS1 chr7 1538374 INTS1 chr7 1538164 Exonic hg19 NA BF377232 Out-of-frame Intra-chr p22.3 p22.3 112085 ChimerSeq ChiTaRs ChiTaRs NFE2L2-NFE2L2 NFE2L2 chr2 178111509 NFE2L2 chr2 178107638 Exonic hg19 NA AK128852 Out-of-frame Intra-chr q31.2 Oncogene Transcription factor q31.2 Oncogene Transcription factor 112086 ChimerSeq ChiTaRs ChiTaRs CD83-CD83 CD83 chr6 14127790 CD83 chr6 14130581 Exonic hg19 NA AA814662 Out-of-frame Intra-chr p23 p23 112087 ChimerSeq ChiTaRs ChiTaRs SYT14-ANKHD1 SYT14 chr1 210257221 ANKHD1 chr5 139894065 Exonic hg19 NA BE148552 Out-of-frame Inter-chr q32.2 q31.3 112088 ChimerSeq ChiTaRs ChiTaRs SLC25A43-SLC25A43 SLC25A43 chrX 118540625 SLC25A43 chrX 118585829 Exonic hg19 NA AA975572 Out-of-frame Intra-chr q24 q24 112089 ChimerSeq ChiTaRs ChiTaRs NAA35-NAA35 NAA35 chr9 88637116 NAA35 chr9 88636911 Exonic hg19 NA CD240272 Out-of-frame Intra-chr q21.33 q21.33 112090 ChimerSeq ChiTaRs ChiTaRs ADCY2-NOL6 ADCY2 chr1 152006275 NOL6 chr9 33462041 Exonic hg19 NA BQ430032 Out-of-frame Inter-chr p15.31 p13.3 112091 ChimerSeq ChiTaRs ChiTaRs PTK2-PTK2 PTK2 chr8 141678428 PTK2 chr8 141712668 Exonic hg19 NA BE929722 In-Frame Intra-chr q24.3 q24.3 112092 ChimerSeq ChiTaRs ChiTaRs FOXP1-ARHGEF7 FOXP1 chr3 71593756 ARHGEF7 chr13 111927879 Exonic hg19 NA BX093912 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor q34 112093 ChimerSeq ChiTaRs ChiTaRs ANKRD37-MRPL49 ANKRD37 chr4 186319699 MRPL49 chr11 64893817 Exonic hg19 NA BM552612 Out-of-frame Inter-chr q35.1 q13.1 112094 ChimerSeq ChiTaRs ChiTaRs FGFR2-FGFR2 FGFR2 chr10 123239149 FGFR2 chr10 123239317 Exonic hg19 NA CN345552 Out-of-frame Intra-chr q26.13 TK:FGFR Oncogene q26.13 TK:FGFR Oncogene 112095 ChimerSeq ChiTaRs ChiTaRs GLUL-SLC24A2 GLUL chr1 182352556 SLC24A2 chr9 19509220 Exonic hg19 NA BE765952 Out-of-frame Inter-chr q25.3 p22.1 112096 ChimerSeq ChiTaRs ChiTaRs PARG-NEFM PARG chr10 51562510 NEFM chr8 24774680 Exonic hg19 NA AI971152 Out-of-frame Inter-chr q11.23 p21.2 112097 ChimerSeq ChiTaRs ChiTaRs FOXK1-RCL1 FOXK1 chr7 4765858 RCL1 chr9 4826875 Exonic hg19 NA BI030352 Out-of-frame Inter-chr p22.1 Transcription factor p24.1 112098 ChimerSeq ChiTaRs ChiTaRs RNGTT-RNGTT RNGTT chr6 89320216 RNGTT chr6 89320323 Exonic hg19 NA AL138402 Out-of-frame Intra-chr q15 q15 112099 ChimerSeq ChiTaRs ChiTaRs ITGB1-ITGB1 ITGB1 chr10 33224487 ITGB1 chr10 33214954 Exonic hg19 NA BG938602 Out-of-frame Intra-chr p11.22 Tumor suppressor gene p11.22 Tumor suppressor gene 112100 ChimerSeq ChiTaRs ChiTaRs SMARCD3-LRP11 SMARCD3 chr7 150974198 LRP11 chr6 150184590 Exonic hg19 NA AL532622 Out-of-frame Inter-chr q36.1 q25.1 112101 ChimerSeq ChiTaRs ChiTaRs CSF1R-UFC1 CSF1R chr5 149433004 UFC1 chr1 161123826 Exonic hg19 NA BI051322 Out-of-frame Inter-chr q32 Oncogene q23.3 112102 ChimerSeq ChiTaRs ChiTaRs PFN2-PTPN12 PFN2 chr3 149682753 PTPN12 chr7 77256261 Exonic hg19 NA AI084432 Out-of-frame Inter-chr q25.1 q11.23 Tumor suppressor gene 112103 ChimerSeq ChiTaRs ChiTaRs UBE2R2-ST6GAL1 UBE2R2 chr9 33918089 ST6GAL1 chr3 186794510 Exonic hg19 NA AW609212 Out-of-frame Inter-chr p13.3 q27.3 112104 ChimerSeq ChiTaRs ChiTaRs LIMD1-DSP LIMD1 chr3 45718592 DSP chr6 7579657 Exonic hg19 NA BF871822 Out-of-frame Inter-chr p21.31 Tumor suppressor gene p24.3 Tumor suppressor gene 112105 ChimerSeq ChiTaRs ChiTaRs C9orf85-ARHGAP10 C9orf85 chr9 74587732 ARHGAP10 chr4 148886241 Exonic hg19 NA BE931282 Out-of-frame Inter-chr q21.13 q31.23 112106 ChimerSeq ChiTaRs ChiTaRs TACC1-PLXNB2 TACC1 chr8 38710546 PLXNB2 chr22 50728748 Exonic hg19 NA BE504712 3'UTR-CDS Inter-chr p11.22 q13.33 112107 ChimerSeq ChiTaRs ChiTaRs ARSB-NALCN ARSB chr5 78231212 NALCN chr13 102045709 Exonic hg19 NA BP424812 Out-of-frame Inter-chr q14.1 q33.1 112108 ChimerSeq ChiTaRs ChiTaRs PPIG-SPATA5 PPIG chr2 170493159 SPATA5 chr4 124023441 Exonic hg19 NA BU679512 Out-of-frame Inter-chr q31.1 q28.1 112109 ChimerSeq ChiTaRs ChiTaRs LAMC1-LAMC1 LAMC1 chr1 183003934 LAMC1 chr1 183048096 Exonic hg19 NA AW856552 Out-of-frame Intra-chr q25.3 q25.3 112110 ChimerSeq ChiTaRs ChiTaRs RPL31-HNRNPC RPL31 chr2 101622880 HNRNPC chr14 21699117 Exonic hg19 NA BP377902 Out-of-frame Inter-chr q11.2 q11.2 112111 ChimerSeq ChiTaRs ChiTaRs ANKS1A-MFAP4 ANKS1A chr6 35057686 MFAP4 chr17 19287290 Exonic hg19 NA AA496022 Out-of-frame Inter-chr p21.31 p11.2 112112 ChimerSeq ChiTaRs ChiTaRs USH2A-GARS USH2A chr1 215800315 GARS chr7 30673602 Exonic hg19 NA AA503472 Out-of-frame Inter-chr q41 p14.3 112113 ChimerSeq ChiTaRs ChiTaRs UBR5-UBR5 UBR5 chr8 103409684 UBR5 chr8 103405307 Exonic hg19 NA AW899492 Out-of-frame Intra-chr q22.3 Oncogene q22.3 Oncogene 112114 ChimerSeq ChiTaRs ChiTaRs CAPZB-ITGB1 CAPZB chr1 19665947 ITGB1 chr10 33197333 Exonic hg19 NA CA420172 Out-of-frame Inter-chr p36.13 p11.22 Tumor suppressor gene 112115 ChimerSeq ChiTaRs ChiTaRs CMC1-AZI2 CMC1 chr3 28304871 AZI2 chr3 28379984 Exonic hg19 NA BE739272 Out-of-frame Intra-chr p24.1 p24.1 Seq+ 112116 ChimerSeq ChiTaRs ChiTaRs ADAM12-ADAM12 ADAM12 chr10 127729292 ADAM12 chr10 127729035 Exonic hg19 NA BM983842 Out-of-frame Intra-chr q26.2 q26.2 112117 ChimerSeq ChiTaRs ChiTaRs GABBR1-SV2B GABBR1 chr6 899118 SV2B chr15 91840386 Exonic hg19 NA DA060372 Out-of-frame Inter-chr q26.1 112118 ChimerSeq ChiTaRs ChiTaRs APBB2-APBB2 APBB2 chr4 40814963 APBB2 chr4 40814599 Exonic hg19 NA CN266502 Out-of-frame Intra-chr p13 p13 112119 ChimerSeq ChiTaRs ChiTaRs PLXNA4-NCKAP5 PLXNA4 chr7 132023073 NCKAP5 chr2 134209177 Exonic hg19 NA BF951342 Out-of-frame Inter-chr q32.3 q21.2 112120 ChimerSeq ChiTaRs ChiTaRs TRIO-ZNF710 TRIO chr5 14198717 ZNF710 chr15 90581470 Exonic hg19 NA BE810822 Out-of-frame Inter-chr p15.2 q26.1 Transcription factor 112121 ChimerSeq ChiTaRs ChiTaRs FLNA-FLNA FLNA chrX 153593246 FLNA chrX 153594392 Exonic hg19 NA BE830722 Out-of-frame Intra-chr q28 Tumor suppressor gene q28 Tumor suppressor gene 112122 ChimerSeq ChiTaRs ChiTaRs SH3YL1-SH3YL1 SH3YL1 chr2 218660 SH3YL1 chr2 218144 Exonic hg19 NA BM457362 Out-of-frame Intra-chr p25.3 p25.3 112123 ChimerSeq ChiTaRs ChiTaRs SENP2-WASF1 SENP2 chr3 185348999 WASF1 chr6 110457477 Exonic hg19 NA AB037752 Out-of-frame Inter-chr q27.2 q21 112124 ChimerSeq ChiTaRs ChiTaRs SOAT1-RRAGD SOAT1 chr1 179281515 RRAGD chr6 90117085 Exonic hg19 NA CB963022 Out-of-frame Inter-chr q25.2 q15 112125 ChimerSeq ChiTaRs ChiTaRs USP39-USP39 USP39 chr2 85833534 USP39 chr2 85833497 Exonic hg19 NA BE839522 Out-of-frame Intra-chr p11.2 p11.2 112126 ChimerSeq ChiTaRs ChiTaRs SERP1-GLUL SERP1 chr3 150301991 GLUL chr1 182353126 Exonic hg19 NA AV650942 Out-of-frame Inter-chr q25.1 q25.3 112127 ChimerSeq ChiTaRs ChiTaRs ZFAND2B-ZFAND2B ZFAND2B chr2 220074366 ZFAND2B chr2 220073150 Exonic hg19 NA AA490922 Out-of-frame Intra-chr q35 q35 112128 ChimerSeq ChiTaRs ChiTaRs KLHL24-KLHL24 KLHL24 chr3 183360109 KLHL24 chr3 183360080 Exonic hg19 NA BF980652 Out-of-frame Intra-chr q27.1 q27.1 112129 ChimerSeq ChiTaRs ChiTaRs LOC100505876-ALDH7A1 LOC100505876 chr2 37428837 ALDH7A1 chr5 125899506 Exonic hg19 NA BG434132 Out-of-frame Inter-chr q23.2 112130 ChimerSeq ChiTaRs ChiTaRs LIPF-LIPF LIPF chr10 90433488 LIPF chr10 90424203 Exonic hg19 NA BP341172 Out-of-frame Intra-chr q23.31 q23.31 112131 ChimerSeq ChiTaRs ChiTaRs RAPGEF5-UBA52 RAPGEF5 chr7 22291414 UBA52 chr19 18684485 Exonic hg19 NA AA165052 Out-of-frame Inter-chr p15.3 p13.11 112132 ChimerSeq ChiTaRs ChiTaRs REPIN1-REPIN1 REPIN1 chr7 150071128 REPIN1 chr7 150070619 Exonic hg19 NA BU630092 Out-of-frame Intra-chr q36.1 Transcription factor q36.1 Transcription factor 112133 ChimerSeq ChiTaRs ChiTaRs NCOA2-MAP2K3 NCOA2 chr8 71172788 MAP2K3 chr17 21213574 Exonic hg19 NA BG674032 Out-of-frame Inter-chr q13.3 Oncogene Transcription factor p11.2 STE:STE7 112134 ChimerSeq ChiTaRs ChiTaRs CPS1-IFNGR1 CPS1 chr2 211523729 IFNGR1 chr6 137518622 Exonic hg19 NA BX102832 Out-of-frame Inter-chr q34 q23.3 112135 ChimerSeq ChiTaRs ChiTaRs SETD5-SETD5 SETD5 chr3 9509727 SETD5 chr3 9490276 Exonic hg19 NA DA530612 Out-of-frame Intra-chr p25.3 p25.3 112136 ChimerSeq ChiTaRs ChiTaRs PAPPA-EPAS1 PAPPA chr9 119162149 EPAS1 chr2 46592433 Exonic hg19 NA BI052182 Out-of-frame Inter-chr q33.1 p21 Tumor suppressor gene Transcription factor 112137 ChimerSeq ChiTaRs ChiTaRs P4HTM-LOC145837 P4HTM chr3 49040417 LOC145837 chr15 69820767 Exonic hg19 NA CV427252 Out-of-frame Inter-chr p21.31 112138 ChimerSeq ChiTaRs ChiTaRs CAPRIN1-CAPRIN1 CAPRIN1 chr11 34122270 CAPRIN1 chr11 34122240 Exonic hg19 NA BQ215232 Out-of-frame Intra-chr p13 p13 112139 ChimerSeq ChiTaRs ChiTaRs ACSL4-ARRDC3 ACSL4 chrX 108971287 ARRDC3 chr5 90678647 Exonic hg19 NA AF116642 Out-of-frame Inter-chr q23 q14.3 112140 ChimerSeq ChiTaRs ChiTaRs STAMBPL1-STAMBPL1 STAMBPL1 chr10 90694899 STAMBPL1 chr10 90694865 Exonic hg19 NA BU676292 Out-of-frame Intra-chr q23.31 q23.31 112141 ChimerSeq ChiTaRs ChiTaRs PRPF40A-SOS2 PRPF40A chr2 153569639 SOS2 chr14 50655261 Exonic hg19 NA BE706422 Out-of-frame Inter-chr q23.3 q21.3 112142 ChimerSeq ChiTaRs ChiTaRs ARHGEF3-SDC4 ARHGEF3 chr3 56819257 SDC4 chr20 43954446 Exonic hg19 NA AW850072 Out-of-frame Inter-chr p14.3 q13.12 112143 ChimerSeq ChiTaRs ChiTaRs TACC2-MRFAP1 TACC2 chr10 124014053 MRFAP1 chr4 6643903 Exonic hg19 NA AA232632 Out-of-frame Inter-chr q26.13 p16.1 112144 ChimerSeq ChiTaRs ChiTaRs MSL2-MSL2 MSL2 chr3 135899342 MSL2 chr3 135898257 Exonic hg19 NA AI190202 Out-of-frame Intra-chr q22.3 q22.3 112145 ChimerSeq ChiTaRs ChiTaRs SLBP-SLBP SLBP chr4 1694786 SLBP chr4 1694786 Exonic hg19 NA CD240302 Out-of-frame Intra-chr p16.3 p16.3 112146 ChimerSeq ChiTaRs ChiTaRs TBCC-ELMO1 TBCC chr6 42712477 ELMO1 chr7 36954372 Exonic hg19 NA BE349632 Out-of-frame Inter-chr p21.1 p14.1 112147 ChimerSeq ChiTaRs ChiTaRs DIAPH2-DIAPH2 DIAPH2 chrX 96452536 DIAPH2 chrX 96452689 Exonic hg19 NA BF997062 Out-of-frame Intra-chr q21.33 q21.33 112148 ChimerSeq ChiTaRs ChiTaRs ACO1-ACO1 ACO1 chr9 32423408 ACO1 chr9 32418128 Exonic hg19 NA BQ350502 Out-of-frame Intra-chr p21.1 p21.1 112149 ChimerSeq ChiTaRs ChiTaRs TMEM245-TMEM245 TMEM245 chr9 111779680 TMEM245 chr9 111779216 Exonic hg19 NA BG111802 Out-of-frame Intra-chr q31.3 q31.3 112150 ChimerSeq ChiTaRs ChiTaRs RASSF5-RASSF5 RASSF5 chr1 206762291 RASSF5 chr1 206762258 Exonic hg19 NA BI907782 Out-of-frame Intra-chr q32.1 Tumor suppressor gene q32.1 Tumor suppressor gene 112151 ChimerSeq ChiTaRs ChiTaRs KLF6-KLF6 KLF6 chr10 3823986 KLF6 chr10 3824322 Exonic hg19 NA BQ328882 3'UTR-CDS Intra-chr p15.2 Oncogene Tumor suppressor gene Transcription factor p15.2 Oncogene Tumor suppressor gene Transcription factor 112152 ChimerSeq ChiTaRs ChiTaRs KDM6A-STOML3 KDM6A chrX 44886962 STOML3 chr13 39540948 Exonic hg19 NA AK122962 Out-of-frame Inter-chr p11.3 Oncogene Tumor suppressor gene q13.3 112153 ChimerSeq ChiTaRs ChiTaRs SND1-BET1L SND1 chr7 127732654 BET1L chr11 204140 Exonic hg19 NA AI914532 Out-of-frame Inter-chr q32.1 p15.5 112154 ChimerSeq ChiTaRs ChiTaRs SLU7-SLU7 SLU7 chr5 159830257 SLU7 chr5 159829590 Exonic hg19 NA BI333542 Out-of-frame Intra-chr q33.3 q33.3 112155 ChimerSeq ChiTaRs ChiTaRs CD34-DBN1 CD34 chr1 208061173 DBN1 chr5 176887485 Exonic hg19 NA AW351462 Out-of-frame Inter-chr q32.2 q35.3 112156 ChimerSeq ChiTaRs ChiTaRs AK3-CDC27 AK3 chr9 4712055 CDC27 chr17 45204135 Exonic hg19 NA AW803562 Out-of-frame Inter-chr p24.1 q21.32 112157 ChimerSeq ChiTaRs ChiTaRs TRIM2-TRIM2 TRIM2 chr4 154260469 TRIM2 chr4 154260210 Exonic hg19 NA CB243962 Out-of-frame Intra-chr q31.3 q31.3 112158 ChimerSeq ChiTaRs ChiTaRs EFHC1-SORBS3 EFHC1 chr6 52370519 SORBS3 chr8 22432191 Exonic hg19 NA BI869012 Out-of-frame Inter-chr p12.2 p21.3 112159 ChimerSeq ChiTaRs ChiTaRs XXYLT1-XXYLT1 XXYLT1 chr3 194975962 XXYLT1 chr3 194976438 Exonic hg19 NA BF946762 Out-of-frame Intra-chr q29 q29 112160 ChimerSeq ChiTaRs ChiTaRs NEXN-UBN2 NEXN chr1 78356601 UBN2 chr7 138989462 Exonic hg19 NA BX470812 Out-of-frame Inter-chr p31.1 q34 112161 ChimerSeq ChiTaRs ChiTaRs MTR-CC2D2A MTR chr1 237064582 CC2D2A chr4 15511759 Exonic hg19 NA BE767082 Out-of-frame Inter-chr q43 Oncogene p15.32 112162 ChimerSeq ChiTaRs ChiTaRs HNRNPH1-HNRNPH1 HNRNPH1 chr5 179046626 HNRNPH1 chr5 179046041 Exonic hg19 NA CV574692 Out-of-frame Intra-chr q35.3 q35.3 112163 ChimerSeq ChiTaRs ChiTaRs TAF10-ZNF217 TAF10 chr11 6632314 ZNF217 chr20 52199354 Exonic hg19 NA DB067912 Out-of-frame Inter-chr p15.4 q13.2 Oncogene Transcription factor 112164 ChimerSeq ChiTaRs ChiTaRs UBE3C-CCND1 UBE3C chr7 157036030 CCND1 chr11 69467979 Exonic hg19 NA BF736662 Out-of-frame Inter-chr q36.3 q13.3 Oncogene 112165 ChimerSeq ChiTaRs ChiTaRs ASAP2-LOC729852 ASAP2 chr2 9508781 LOC729852 chr7 7798124 Exonic hg19 NA CV426492 Out-of-frame Inter-chr p25.1 112166 ChimerSeq ChiTaRs ChiTaRs MAGI2-CTNNA2 MAGI2 chr7 78400561 CTNNA2 chr2 80620333 Exonic hg19 NA DA202182 Out-of-frame Inter-chr q21.11 p12 Tumor suppressor gene 112167 ChimerSeq ChiTaRs ChiTaRs TMEM163-TMEM163 TMEM163 chr2 135223466 TMEM163 chr2 135223040 Exonic hg19 NA BI050382 Out-of-frame Intra-chr q21.3 q21.3 112168 ChimerSeq ChiTaRs ChiTaRs MDH1-LRTOMT MDH1 chr2 63831904 LRTOMT chr11 71796442 Exonic hg19 NA BE709622 Out-of-frame Inter-chr p15 q13.4 112169 ChimerSeq ChiTaRs ChiTaRs HTRA2-DDX19B HTRA2 chr2 74760477 DDX19B chr16 70406043 Exonic hg19 NA AW044242 Out-of-frame Inter-chr p13.1 Tumor suppressor gene q22.1 112170 ChimerSeq ChiTaRs ChiTaRs TRIQK-TRIQK TRIQK chr8 93959308 TRIQK chr8 93959370 Exonic hg19 NA CV326862 Out-of-frame Intra-chr q22.1 q22.1 112171 ChimerSeq ChiTaRs ChiTaRs CTH-CTH CTH chr1 70879836 CTH chr1 70879812 Exonic hg19 NA BX106222 Out-of-frame Intra-chr p31.1 p31.1 112172 ChimerSeq ChiTaRs ChiTaRs CLIC5-CLIC5 CLIC5 chr6 45934143 CLIC5 chr6 45933315 Exonic hg19 NA BI056842 Out-of-frame Intra-chr p21.1 p21.1 112173 ChimerSeq ChiTaRs ChiTaRs NHSL1-EMILIN1 NHSL1 chr6 138839641 EMILIN1 chr2 27308580 Exonic hg19 NA CA421108 Out-of-frame Inter-chr q24.1 p23.3 112174 ChimerSeq ChiTaRs ChiTaRs EPHX1-JPH3 EPHX1 chr1 226033260 JPH3 chr16 87731017 Exonic hg19 NA AI933022 Out-of-frame Inter-chr q42.12 q24.2 112175 ChimerSeq ChiTaRs ChiTaRs F3-C1orf21 F3 chr1 94999474 C1orf21 chr1 184484813 Exonic hg19 NA AI624522 Out-of-frame Intra-chr p21.3 q25.3 112176 ChimerSeq ChiTaRs ChiTaRs CCDC90A-CCDC90A CCDC90A chr6 13787615 CCDC90A chr6 13787089 Exonic hg19 NA BQ215742 Out-of-frame Intra-chr 112177 ChimerSeq ChiTaRs ChiTaRs PPP3CA-PPP3CA PPP3CA chr4 101946816 PPP3CA chr4 101946445 Exonic hg19 NA CA312092 Out-of-frame Intra-chr q24 q24 112178 ChimerSeq ChiTaRs ChiTaRs ALAS1-ALAS1 ALAS1 chr3 52248537 ALAS1 chr3 52245549 Exonic hg19 NA CN258752 Out-of-frame Intra-chr p21.2 p21.2 112179 ChimerSeq ChiTaRs ChiTaRs SEC62-SEC62 SEC62 chr3 169712233 SEC62 chr3 169711530 Exonic hg19 NA BU608812 Out-of-frame Intra-chr q26.2 q26.2 112180 ChimerSeq ChiTaRs ChiTaRs FGF12-SENP6 FGF12 chr3 192120891 SENP6 chr6 76425446 Exonic hg19 NA AA678812 Out-of-frame Inter-chr q29 q14.1 112181 ChimerSeq ChiTaRs ChiTaRs VAV3-VAV3 VAV3 chr1 108129691 VAV3 chr1 108128565 Exonic hg19 NA BF367142 Out-of-frame Intra-chr p13.3 p13.3 112182 ChimerSeq ChiTaRs ChiTaRs NEGR1-RBM3 NEGR1 chr1 72748520 RBM3 chrX 48434920 Exonic hg19 NA AY358132 Out-of-frame Inter-chr p31.1 p11.23 112183 ChimerSeq ChiTaRs ChiTaRs TRPS1-PCGF5 TRPS1 chr8 116454627 PCGF5 chr10 93002873 Exonic hg19 NA BF329822 Out-of-frame Inter-chr q23.3 Transcription factor q23.32 112184 ChimerSeq ChiTaRs ChiTaRs TCF7-TOR1AIP2 TCF7 chr5 133483371 TOR1AIP2 chr1 179810592 Exonic hg19 NA BF669592 Out-of-frame Inter-chr q31.1 Transcription factor q25.2 112185 ChimerSeq ChiTaRs ChiTaRs LMNA-RCAN2 LMNA chr1 156109872 RCAN2 chr6 46231461 Exonic hg19 NA CD244832 Out-of-frame Inter-chr q22 p12.3 112186 ChimerSeq ChiTaRs ChiTaRs ATG5-UBE2G2 ATG5 chr6 106660099 UBE2G2 chr21 46188955 Exonic hg19 NA AL355682 Out-of-frame Inter-chr q21 q22.3 112187 ChimerSeq ChiTaRs ChiTaRs MRTO4-CD55 MRTO4 chr1 19586622 CD55 chr1 207497955 Exonic hg19 NA CB160252 3'UTR-CDS Intra-chr p36.13 q32.2 112188 ChimerSeq ChiTaRs ChiTaRs SRRM1-CNNM3 SRRM1 chr1 24996784 CNNM3 chr2 97495842 Exonic hg19 NA BF757512 Out-of-frame Inter-chr p36.11 q11.2 112189 ChimerSeq ChiTaRs ChiTaRs CALU-TRIAP1 CALU chr7 128411863 TRIAP1 chr12 120881778 Exonic hg19 NA CF135162 Out-of-frame Inter-chr q32.1 q24.31 112190 ChimerSeq ChiTaRs ChiTaRs MCM3-CARS MCM3 chr6 52146874 CARS chr11 3039637 Exonic hg19 NA BI117082 In-Frame Inter-chr p12.2 112191 ChimerSeq ChiTaRs ChiTaRs ACTR3C-SFTPB ACTR3C chr7 149959438 SFTPB chr2 85885270 Exonic hg19 NA AY102072 Out-of-frame Inter-chr q36.1 p11.2 112192 ChimerSeq ChiTaRs ChiTaRs RRAGA-RRAGA RRAGA chr9 19050807 RRAGA chr9 19050794 Exonic hg19 NA AA737252 Out-of-frame Intra-chr p22.1 p22.1 112193 ChimerSeq ChiTaRs ChiTaRs EIF1B-EIF1B EIF1B chr3 40353845 EIF1B chr3 40351390 Exonic hg19 NA AW205722 Out-of-frame Intra-chr p22.1 p22.1 112194 ChimerSeq ChiTaRs ChiTaRs IGFBP7-IGFBP7 IGFBP7 chr4 57897504 IGFBP7 chr4 57898615 Exonic hg19 NA BM969902 Out-of-frame Intra-chr q12 Tumor suppressor gene q12 Tumor suppressor gene 112195 ChimerSeq ChiTaRs ChiTaRs EPB41L4B-AP3B1 EPB41L4B chr9 112058193 AP3B1 chr5 77334889 Exonic hg19 NA DA978262 Out-of-frame Inter-chr q31.3 q14.1 112196 ChimerSeq ChiTaRs ChiTaRs LOC729421-MAGT1 LOC729421 chr5 151149831 MAGT1 chrX 77081865 Exonic hg19 NA BC016342 Out-of-frame Inter-chr q21.1 112197 ChimerSeq ChiTaRs ChiTaRs UBR5-MLL3 UBR5 chr8 103354746 MLL3 chr7 151860195 Exonic hg19 NA BF088402 Out-of-frame Inter-chr q22.3 Oncogene Tumor suppressor gene 112198 ChimerSeq ChiTaRs ChiTaRs GRHL2-HNRNPD GRHL2 chr8 102629189 HNRNPD chr4 83284033 Exonic hg19 NA BE935692 Out-of-frame Inter-chr q22.3 Transcription factor q21.22 112199 ChimerSeq ChiTaRs ChiTaRs TBL1X-PAFAH1B2 TBL1X chrX 9687778 PAFAH1B2 chr11 117038809 Exonic hg19 NA AW629132 Out-of-frame Inter-chr p22.31 q23.3 112200 ChimerSeq ChiTaRs ChiTaRs EIF2AK3-EIF2AK3 EIF2AK3 chr2 88892864 EIF2AK3 chr2 88887503 Exonic hg19 NA BF738032 Out-of-frame Intra-chr p11.2 p11.2 112201 ChimerSeq ChiTaRs ChiTaRs GNAQ-GNAQ GNAQ chr9 80490477 GNAQ chr9 80490470 Exonic hg19 NA AA729462 Out-of-frame Intra-chr q21.2 Oncogene q21.2 Oncogene 112202 ChimerSeq ChiTaRs ChiTaRs PPFIBP2-PPFIBP2 PPFIBP2 chr11 7626560 PPFIBP2 chr11 7625975 Exonic hg19 NA CV368822 Out-of-frame Intra-chr p15.4 p15.4 112203 ChimerSeq ChiTaRs ChiTaRs FAM50A-FAM26F FAM50A chrX 153674791 FAM26F chr6 116783536 Exonic hg19 NA BF882572 Out-of-frame Inter-chr q28 q22.1 112204 ChimerSeq ChiTaRs ChiTaRs MDN1-MDN1 MDN1 chr6 90383108 MDN1 chr6 90371150 Exonic hg19 NA BC014882 Out-of-frame Intra-chr q15 q15 112205 ChimerSeq ChiTaRs ChiTaRs ZNF385B-FTL ZNF385B chr2 180726047 FTL chr19 49470024 Exonic hg19 NA AK131432 Out-of-frame Inter-chr q31.3 Transcription factor q13.33 112206 ChimerSeq ChiTaRs ChiTaRs G6PD-G6PD G6PD chrX 153761325 G6PD chrX 153761805 Exonic hg19 NA BE816962 Out-of-frame Intra-chr q28 Oncogene q28 Oncogene 112207 ChimerSeq ChiTaRs ChiTaRs EIF4G2-APOBEC3C EIF4G2 chr11 10820973 APOBEC3C chr22 39414011 Exonic hg19 NA BF914332 Out-of-frame Inter-chr p15.4 q13.1 112208 ChimerSeq ChiTaRs ChiTaRs MGLL-MGLL MGLL chr3 127411083 MGLL chr3 127408820 Exonic hg19 NA AI817662 Out-of-frame Intra-chr q21.3 q21.3 112209 ChimerSeq ChiTaRs ChiTaRs CELF2-CELF2 CELF2 chr10 11374755 CELF2 chr10 11375492 Exonic hg19 NA CB218432 Out-of-frame Intra-chr p14 p14 112210 ChimerSeq ChiTaRs ChiTaRs ARHGAP15-INPP5D ARHGAP15 chr2 144121981 INPP5D chr2 233968795 Exonic hg19 NA BF903182 Out-of-frame Intra-chr q22.2 112211 ChimerSeq ChiTaRs ChiTaRs OSMR-FGG OSMR chr5 38935743 FGG chr4 155531313 Exonic hg19 NA AI133452 3'UTR-CDS Inter-chr p13.1 q32.1 112212 ChimerSeq ChiTaRs ChiTaRs ADCY2-MYL12A ADCY2 chr1 152009434 MYL12A chr18 3247826 Exonic hg19 NA BF825732 Out-of-frame Inter-chr p15.31 p11.31 112213 ChimerSeq ChiTaRs ChiTaRs LOC100134229-SPOCD1 LOC100134229 chr7 139877292 SPOCD1 chr1 32260191 Exonic hg19 NA BI963092 Out-of-frame Inter-chr p35.2 112214 ChimerSeq ChiTaRs ChiTaRs BTG2-BTG2 BTG2 chr1 203278712 BTG2 chr1 203278475 Exonic hg19 NA CD240342 Out-of-frame Intra-chr q32.1 Tumor suppressor gene q32.1 Tumor suppressor gene 112215 ChimerSeq ChiTaRs ChiTaRs KLF7-WDR48 KLF7 chr2 207998495 WDR48 chr3 39133543 Exonic hg19 NA AW898252 Out-of-frame Inter-chr q33.3 Transcription factor p22.2 Tumor suppressor gene 112216 ChimerSeq ChiTaRs ChiTaRs PHACTR1-PHACTR1 PHACTR1 chr6 12976609 PHACTR1 chr6 12866280 Exonic hg19 NA BE091632 Out-of-frame Intra-chr 112217 ChimerSeq ChiTaRs ChiTaRs C10orf32-C10orf32 C10orf32 chr10 104623553 C10orf32 chr10 104623557 Exonic hg19 NA BG261302 Out-of-frame Intra-chr 112218 ChimerSeq ChiTaRs ChiTaRs HK1-EPN2 HK1 chr10 71161491 EPN2 chr17 19225736 Exonic hg19 NA BI055002 Out-of-frame Inter-chr q22.1 p11.2 112219 ChimerSeq ChiTaRs ChiTaRs LHFPL2-ANXA2 LHFPL2 chr5 77923675 ANXA2 chr15 60689485 Exonic hg19 NA DA591552 Out-of-frame Inter-chr q14.1 q22.2 112220 ChimerSeq ChiTaRs ChiTaRs PLXNA2-RAB5B PLXNA2 chr1 208328996 RAB5B chr12 56372982 Exonic hg19 NA BG002792 Out-of-frame Inter-chr q32.2 q13.2 112221 ChimerSeq ChiTaRs ChiTaRs NOM1-NOM1 NOM1 chr7 156763866 NOM1 chr7 156765136 Exonic hg19 NA BF891072 Out-of-frame Intra-chr q36.3 q36.3 112222 ChimerSeq ChiTaRs ChiTaRs SHB-CDH23 SHB chr9 37919412 CDH23 chr10 73520542 Exonic hg19 NA AA985372 Out-of-frame Inter-chr p13.1 q22.1 112223 ChimerSeq ChiTaRs ChiTaRs ARFIP1-DUSP1 ARFIP1 chr4 153833064 DUSP1 chr5 172197616 Exonic hg19 NA AV722782 Out-of-frame Inter-chr q31.3 q35.1 Tumor suppressor gene 112224 ChimerSeq ChiTaRs ChiTaRs MIR3134-PAPPA MIR3134 chr9 114825842 PAPPA chr9 119131006 Exonic hg19 NA BF997872 Out-of-frame Intra-chr p25.1 q33.1 112225 ChimerSeq ChiTaRs ChiTaRs ALB-MALAT1 ALB chr4 74274400 MALAT1 chr11 65267378 Exonic hg19 NA BG545312 Out-of-frame Inter-chr q13.3 q13.1 112226 ChimerSeq ChiTaRs ChiTaRs IGFBP5-IGFBP5 IGFBP5 chr2 217537759 IGFBP5 chr2 217537914 Exonic hg19 NA CO245632 Out-of-frame Intra-chr q35 Tumor suppressor gene q35 Tumor suppressor gene 112227 ChimerSeq ChiTaRs ChiTaRs DCAF13-DCAF13 DCAF13 chr8 104455117 DCAF13 chr8 104453716 Exonic hg19 NA BQ338782 Out-of-frame Intra-chr q22.3 q22.3 112228 ChimerSeq ChiTaRs ChiTaRs TFRC-TFRC TFRC chr3 195783984 TFRC chr3 195790339 Exonic hg19 NA BU661402 Out-of-frame Intra-chr q29 q29 112229 ChimerSeq ChiTaRs ChiTaRs PCM1-FGL1 PCM1 chr8 17780697 FGL1 chr8 17749190 Exonic hg19 NA BM910902 5'UTR-5'UTR Intra-chr p22 p22 112230 ChimerSeq ChiTaRs ChiTaRs CDC42SE1-CDC42SE1 CDC42SE1 chr1 151025596 CDC42SE1 chr1 151029264 Exonic hg19 NA BF934432 Out-of-frame Intra-chr q21.3 q21.3 112231 ChimerSeq ChiTaRs ChiTaRs ITGB5-PPP6R3 ITGB5 chr3 124567184 PPP6R3 chr11 68274778 Exonic hg19 NA BQ331562 Out-of-frame Inter-chr q21.2 q13.2 112232 ChimerSeq ChiTaRs ChiTaRs LAMB2-LAMB2 LAMB2 chr3 49166576 LAMB2 chr3 49163880 Exonic hg19 NA BF803132 Out-of-frame Intra-chr p21.31 p21.31 112233 ChimerSeq ChiTaRs ChiTaRs SEPT6-GNB5 2006_ 9_ 1_ chrX 118750122 GNB5 chr15 52471980 Exonic hg19 NA AI819942 Out-of-frame Inter-chr q21.2 112234 ChimerSeq ChiTaRs ChiTaRs PHC3-PRPF4B PHC3 chr3 169845024 PRPF4B chr6 4052364 Exonic hg19 NA AA582722 Out-of-frame Inter-chr q26.2 Tumor suppressor gene p25.2 112235 ChimerSeq ChiTaRs ChiTaRs PDCD4-UBE2N PDCD4 chr10 112658270 UBE2N chr12 93802766 Exonic hg19 NA BE076082 Out-of-frame Inter-chr q25.2 Tumor suppressor gene q22 112236 ChimerSeq ChiTaRs ChiTaRs KALRN-PRB4 KALRN chr3 123979233 PRB4 chr12 11428012 Exonic hg19 NA BG994662 Out-of-frame Inter-chr q21.1 112237 ChimerSeq ChiTaRs ChiTaRs ZC3HAV1L-LAMC2 ZC3HAV1L chr7 138720707 LAMC2 chr1 183204842 Exonic hg19 NA AA928552 Out-of-frame Inter-chr q34 q25.3 112238 ChimerSeq ChiTaRs ChiTaRs CYP26A1-DGCR2 CYP26A1 chr10 94833799 DGCR2 chr22 19029387 Exonic hg19 NA BE350062 Out-of-frame Inter-chr q23.33 q11.21 112239 ChimerSeq ChiTaRs ChiTaRs MTUS1-OASL MTUS1 chr8 17612513 OASL chr12 121458519 Exonic hg19 NA AF063612 Out-of-frame Inter-chr p22 Tumor suppressor gene q24.31 112240 ChimerSeq ChiTaRs ChiTaRs SSBP2-SSBP2 SSBP2 chr5 80906385 SSBP2 chr5 80906374 Exonic hg19 NA BG996512 Out-of-frame Intra-chr q14.1 Tumor suppressor gene q14.1 Tumor suppressor gene 112241 ChimerSeq ChiTaRs ChiTaRs HPS3-RBFOX1 HPS3 chr3 148888692 RBFOX1 chr16 6236657 Exonic hg19 NA BI040582 Out-of-frame Inter-chr q24 p13.3 112242 ChimerSeq ChiTaRs ChiTaRs FBXL4-CTTN FBXL4 chr6 99391723 CTTN chr11 70268019 Exonic hg19 NA BF354192 Out-of-frame Inter-chr q16.2 q13.3 112243 ChimerSeq ChiTaRs ChiTaRs COQ4-COQ4 COQ4 chr9 131096062 COQ4 chr9 131096072 Exonic hg19 NA BE151922 Out-of-frame Intra-chr q34.11 q34.11 112244 ChimerSeq ChiTaRs ChiTaRs SEPN1-FTSJ1 SEPN1 chr1 26144689 FTSJ1 chrX 48340785 Exonic hg19 NA CN304822 Out-of-frame Inter-chr p11.23 112245 ChimerSeq ChiTaRs ChiTaRs KHDRBS1-KHDRBS1 KHDRBS1 chr1 32482555 KHDRBS1 chr1 32482185 Exonic hg19 NA BF962242 Out-of-frame Intra-chr p35.2 p35.2 112246 ChimerSeq ChiTaRs ChiTaRs CCDC12-S100A9 CCDC12 chr3 47007770 S100A9 chr1 153333305 Exonic hg19 NA BI020912 Out-of-frame Inter-chr p21.31 q21.3 112247 ChimerSeq ChiTaRs ChiTaRs NRCAM-GNB2L1 NRCAM chr7 108096812 GNB2L1 chr5 180663929 Exonic hg19 NA BC000672 Out-of-frame Inter-chr q31.1 Tumor suppressor gene Tumor suppressor gene 112248 ChimerSeq ChiTaRs ChiTaRs SEMA5A-SRRM4 SEMA5A chr5 9455932 SRRM4 chr12 119456846 Exonic hg19 NA BF961792 Out-of-frame Inter-chr p15.31 q24.23 112249 ChimerSeq ChiTaRs ChiTaRs RBM33-FLNB RBM33 chr7 155501986 FLNB chr3 58121724 Exonic hg19 NA BF741912 Out-of-frame Inter-chr q36.3 p14.3 112250 ChimerSeq ChiTaRs ChiTaRs KNDC1-KNDC1 KNDC1 chr10 135037626 KNDC1 chr10 135037600 Exonic hg19 NA AI680882 Out-of-frame Intra-chr q26.3 q26.3 112251 ChimerSeq ChiTaRs ChiTaRs COL12A1-COL12A1 COL12A1 chr6 75795888 COL12A1 chr6 75795872 Exonic hg19 NA BF154542 Out-of-frame Intra-chr q14.1 q14.1 112252 ChimerSeq ChiTaRs ChiTaRs NOL7-PLEKHJ1 NOL7 chr6 13621127 PLEKHJ1 chr19 2233152 Exonic hg19 NA BC078672 3'UTR-3'UTR Inter-chr p23 Tumor suppressor gene p13.3 112253 ChimerSeq ChiTaRs ChiTaRs STRBP-SLC35A5 STRBP chr9 125901859 SLC35A5 chr3 112282071 Exonic hg19 NA BF814152 Out-of-frame Inter-chr q33.3 q13.2 112254 ChimerSeq ChiTaRs ChiTaRs CAPZB-NECAP2 CAPZB chr1 19719566 NECAP2 chr1 16785692 Exonic hg19 NA BF946572 Out-of-frame Intra-chr p36.13 p36.13 112255 ChimerSeq ChiTaRs ChiTaRs UBR5-UBR5 UBR5 chr8 103265642 UBR5 chr8 103265623 Exonic hg19 NA BU677222 Out-of-frame Intra-chr q22.3 Oncogene q22.3 Oncogene 112256 ChimerSeq ChiTaRs ChiTaRs GTDC1-GTDC1 GTDC1 chr2 144809356 GTDC1 chr2 144808971 Exonic hg19 NA AA579552 Out-of-frame Intra-chr q22.3 q22.3 112257 ChimerSeq ChiTaRs ChiTaRs SMC2-SMC2 SMC2 chr9 106864784 SMC2 chr9 106873891 Exonic hg19 NA AA769582 Out-of-frame Intra-chr q31.1 q31.1 112258 ChimerSeq ChiTaRs ChiTaRs STAMBPL1-STAMBPL1 STAMBPL1 chr10 90695018 STAMBPL1 chr10 90695004 Exonic hg19 NA AA687832 Out-of-frame Intra-chr q23.31 q23.31 112259 ChimerSeq ChiTaRs ChiTaRs SETD5-MED24 SETD5 chr3 9510489 MED24 chr17 38175355 Exonic hg19 NA BG108372 Out-of-frame Inter-chr p25.3 q21.1 112260 ChimerSeq ChiTaRs ChiTaRs SH3PXD2A-ERC2 SH3PXD2A chr10 105402690 ERC2 chr3 56026171 Exonic hg19 NA BQ892422 Out-of-frame Inter-chr q24.33 p14.3 112261 ChimerSeq ChiTaRs ChiTaRs IFI6-TNRC18 IFI6 chr1 27998702 TNRC18 chr7 5410784 Exonic hg19 NA BP320632 Out-of-frame Inter-chr p35.3 p22.1 112262 ChimerSeq ChiTaRs ChiTaRs AHDC1-WDFY3 AHDC1 chr1 27923271 WDFY3 chr4 85607777 Exonic hg19 NA CV376002 Out-of-frame Inter-chr p35.3 Transcription factor q21.23 112263 ChimerSeq ChiTaRs ChiTaRs EIF3H-EIF3H EIF3H chr8 117669527 EIF3H chr8 117661089 Exonic hg19 NA AA715462 Out-of-frame Intra-chr q24.11 q24.11 112264 ChimerSeq ChiTaRs ChiTaRs CHST15-RBM4B CHST15 chr10 125768450 RBM4B chr11 66438295 Exonic hg19 NA BE830532 Out-of-frame Inter-chr q26.13 q13.2 112265 ChimerSeq ChiTaRs ChiTaRs SORBS2-SORBS2 SORBS2 chr4 186582160 SORBS2 chr4 186580894 Exonic hg19 NA AI278482 Out-of-frame Intra-chr q35.1 q35.1 112266 ChimerSeq ChiTaRs ChiTaRs SMPD4-MTCH1 SMPD4 chr2 130921238 MTCH1 chr6 36935918 Exonic hg19 NA AK126162 Out-of-frame Inter-chr q21.1 p21.2 112267 ChimerSeq ChiTaRs ChiTaRs FAM184A-HNRNPAB FAM184A chr6 119373543 HNRNPAB chr5 177633453 Exonic hg19 NA BF362772 Out-of-frame Inter-chr q22.31 q35.3 112268 ChimerSeq ChiTaRs ChiTaRs GORAB-DST GORAB chr1 170521742 DST chr6 56382351 Exonic hg19 NA BG952262 Out-of-frame Inter-chr q24.2 Tumor suppressor gene p12.1 Oncogene 112269 ChimerSeq ChiTaRs ChiTaRs PSAP-RNF187 PSAP chr10 73576496 RNF187 chr1 228681907 Exonic hg19 NA BG996012 Out-of-frame Inter-chr q22.1 q42.13 112270 ChimerSeq ChiTaRs ChiTaRs CASP10-CGA CASP10 chr2 202061223 CGA chr6 87796110 Exonic hg19 NA BE842422 Out-of-frame Inter-chr q33.1 q14.3 112271 ChimerSeq ChiTaRs ChiTaRs TNPO3-TNPO3 TNPO3 chr7 128594562 TNPO3 chr7 128595280 Exonic hg19 NA AW236972 Out-of-frame Intra-chr q32.1 q32.1 112272 ChimerSeq ChiTaRs ChiTaRs CPSF7-EVL CPSF7 chr11 61197442 EVL chr14 100531767 Exonic hg19 NA BI767712 Out-of-frame Inter-chr q12.2 q32.2 112273 ChimerSeq ChiTaRs ChiTaRs SGK1-SGK1 SGK1 chr6 134559669 SGK1 chr6 134559320 Exonic hg19 NA BF351612 Out-of-frame Intra-chr q23.2 AGC:SGK Oncogene q23.2 AGC:SGK Oncogene 112274 ChimerSeq ChiTaRs ChiTaRs DST-MAN1A2 DST chr6 56329656 MAN1A2 chr1 117950895 Exonic hg19 NA BF354622 Out-of-frame Inter-chr p12.1 Oncogene p12 112275 ChimerSeq ChiTaRs ChiTaRs VIM-IQCG VIM chr10 17276823 IQCG chr3 197686585 Exonic hg19 NA CV328902 Out-of-frame Inter-chr p13 Tumor suppressor gene q29 112276 ChimerSeq ChiTaRs ChiTaRs PDE6B-INO80 PDE6B chr4 664571 INO80 chr15 41291127 Exonic hg19 NA BU741962 Out-of-frame Inter-chr p16.3 q15.1 112277 ChimerSeq ChiTaRs ChiTaRs KCNIP2-CBFA2T3 KCNIP2 chr10 103590054 CBFA2T3 chr16 89035167 Exonic hg19 NA BI025002 Out-of-frame Inter-chr q24.32 q24.3 Tumor suppressor gene 112278 ChimerSeq ChiTaRs ChiTaRs ATP1A1-ATP1A1 ATP1A1 chr1 116927451 ATP1A1 chr1 116932144 Exonic hg19 NA BQ312492 Out-of-frame Intra-chr p13.1 p13.1 112279 ChimerSeq ChiTaRs ChiTaRs ANKRD17-ANKRD17 ANKRD17 chr4 73957698 ANKRD17 chr4 73957766 Exonic hg19 NA BE934392 Out-of-frame Intra-chr q13.3 q13.3 112280 ChimerSeq ChiTaRs ChiTaRs ATP1A1-ZFP36 ATP1A1 chr1 116943397 ZFP36 chr19 39898812 Exonic hg19 NA BF853292 Out-of-frame Inter-chr p13.1 q13.2 Tumor suppressor gene 112281 ChimerSeq ChiTaRs ChiTaRs MUC3A-MUC3A MUC3A chr7 100610904 MUC3A chr7 100610961 Exonic hg19 NA AW849602 Out-of-frame Intra-chr q22.1 q22.1 112282 ChimerSeq ChiTaRs ChiTaRs NBEAL1-MEN1 NBEAL1 chr2 204056058 MEN1 chr11 64570988 Exonic hg19 NA BC001802 Out-of-frame Inter-chr q33.2 q13.1 Oncogene Tumor suppressor gene 112283 ChimerSeq ChiTaRs ChiTaRs FLJ39534-FLJ39534 FLJ39534 chr3 47264451 FLJ39534 chr3 47264546 Exonic hg19 NA BF528292 Out-of-frame Intra-chr 112284 ChimerSeq ChiTaRs ChiTaRs MAPK9-MAPK9 MAPK9 chr5 179663251 MAPK9 chr5 179662825 Exonic hg19 NA BU676392 Out-of-frame Intra-chr q35.3 Tumor suppressor gene q35.3 Tumor suppressor gene 112285 ChimerSeq ChiTaRs ChiTaRs ZNF696-ZC3H3 ZNF696 chr8 144375236 ZC3H3 chr8 144547895 Exonic hg19 NA BI831452 Out-of-frame Intra-chr q24.3 Transcription factor 112286 ChimerSeq ChiTaRs ChiTaRs SLC16A2-ZNF16 SLC16A2 chrX 73665447 ZNF16 chr8 146157686 Exonic hg19 NA DA085082 Out-of-frame Inter-chr q13.2 q24.3 Transcription factor 112287 ChimerSeq ChiTaRs ChiTaRs SMO-CHCHD3 SMO chr7 128848662 CHCHD3 chr7 132719269 Exonic hg19 NA BC004142 Out-of-frame Intra-chr q32.1 Oncogene q33 Transcription factor 112288 ChimerSeq ChiTaRs ChiTaRs FN1-CD52 FN1 chr2 216232620 CD52 chr1 26646683 Exonic hg19 NA BP392752 Out-of-frame Inter-chr q35 Oncogene p36.11 112289 ChimerSeq ChiTaRs ChiTaRs MEX3A-MEX3A MEX3A chr1 156044263 MEX3A chr1 156043410 Exonic hg19 NA BM971922 Out-of-frame Intra-chr q22 q22 112290 ChimerSeq ChiTaRs ChiTaRs COL3A1-THBS2 COL3A1 chr2 189876779 THBS2 chr6 169615881 Exonic hg19 NA C16582 Out-of-frame Inter-chr q32.2 q27 112291 ChimerSeq ChiTaRs ChiTaRs HNRNPH1-ACTN1 HNRNPH1 chr5 179049818 ACTN1 chr14 69363354 Exonic hg19 NA CO249202 Out-of-frame Inter-chr q35.3 q24.1 112292 ChimerSeq ChiTaRs ChiTaRs BSCL2-ADM BSCL2 chr11 62457821 ADM chr11 10328800 Exonic hg19 NA CB242152 Out-of-frame Intra-chr q12.3 p15.4 112293 ChimerSeq ChiTaRs ChiTaRs USP11-USP11 USP11 chrX 47107349 USP11 chrX 47104451 Exonic hg19 NA AW955052 Out-of-frame Intra-chr p11.3 p11.3 112294 ChimerSeq ChiTaRs ChiTaRs POU6F2-KCND2 POU6F2 chr7 39378926 KCND2 chr7 120268800 Exonic hg19 NA BF352842 Out-of-frame Intra-chr p14.1 Tumor suppressor gene Transcription factor q31.31 112295 ChimerSeq ChiTaRs ChiTaRs TFPI-ARID1A TFPI chr2 188369303 ARID1A chr1 27108477 Exonic hg19 NA BQ187382 Out-of-frame Inter-chr q32.1 p36.11 Oncogene Tumor suppressor gene 112296 ChimerSeq ChiTaRs ChiTaRs AHCYL1-RNFT2 AHCYL1 chr1 110535051 RNFT2 chr12 117217168 Exonic hg19 NA AA207072 Out-of-frame Inter-chr p13.3 Tumor suppressor gene q24.22 112297 ChimerSeq ChiTaRs ChiTaRs NFIA-NFIA NFIA chr1 61921759 NFIA chr1 61892144 Exonic hg19 NA BE765492 Out-of-frame Intra-chr p31.3 Transcription factor p31.3 Transcription factor 112298 ChimerSeq ChiTaRs ChiTaRs FAM129B-FAM129B FAM129B chr9 130268042 FAM129B chr9 130268053 Exonic hg19 NA BU507222 Out-of-frame Intra-chr q34.11 q34.11 112299 ChimerSeq ChiTaRs ChiTaRs EEF1D-EEF1D EEF1D chr8 144679549 EEF1D chr8 144671738 Exonic hg19 NA BF513932 Out-of-frame Intra-chr 112300 ChimerSeq ChiTaRs ChiTaRs SCGB3A1-TMEM39B SCGB3A1 chr5 180018484 TMEM39B chr1 32542765 Exonic hg19 NA BQ067622 Out-of-frame Inter-chr q35.3 Tumor suppressor gene p35.2 112301 ChimerSeq ChiTaRs ChiTaRs C1orf210-FRMD6 C1orf210 chr1 43750972 FRMD6 chr14 52062973 Exonic hg19 NA BG987662 Out-of-frame Inter-chr p34.2 q22.1 112302 ChimerSeq ChiTaRs ChiTaRs FBXO42-FBXO42 FBXO42 chr1 16641933 FBXO42 chr1 16621278 Exonic hg19 NA BF932862 Out-of-frame Intra-chr p36.13 p36.13 112303 ChimerSeq ChiTaRs ChiTaRs PRPF19-PRPF19 PRPF19 chr11 60658543 PRPF19 chr11 60670262 Exonic hg19 NA BU621822 Out-of-frame Intra-chr q12.2 q12.2 112304 ChimerSeq ChiTaRs ChiTaRs BRD9-DGKD BRD9 chr5 863953 DGKD chr2 234373442 Exonic hg19 NA BE245442 Out-of-frame Inter-chr p15.33 112305 ChimerSeq ChiTaRs ChiTaRs NFE2L2-NFE2L2 NFE2L2 chr2 178119074 NFE2L2 chr2 178119063 Exonic hg19 NA AA508553 Out-of-frame Intra-chr q31.2 Oncogene Transcription factor q31.2 Oncogene Transcription factor 112306 ChimerSeq ChiTaRs ChiTaRs BSDC1-UBE2O BSDC1 chr1 32831254 UBE2O chr17 74392392 Exonic hg19 NA AA367973 Out-of-frame Inter-chr p35.1 q25.1 112307 ChimerSeq ChiTaRs ChiTaRs ZFP91-ZFP91 ZFP91 chr11 58387756 ZFP91 chr11 58387902 Exonic hg19 NA AA278303 Out-of-frame Intra-chr q12.1 Transcription factor q12.1 Transcription factor 112308 ChimerSeq ChiTaRs ChiTaRs ZKSCAN1-NF1 ZKSCAN1 chr7 99635350 NF1 chr17 29471133 Exonic hg19 NA AA452203 Out-of-frame Inter-chr q22.1 Transcription factor q11.2 Oncogene Tumor suppressor gene 112309 ChimerSeq ChiTaRs ChiTaRs CYP20A1-CYP20A1 CYP20A1 chr2 204165021 CYP20A1 chr2 204164675 Exonic hg19 NA AA569553 Out-of-frame Intra-chr q33.2 q33.2 112310 ChimerSeq ChiTaRs ChiTaRs CALU-CALU CALU chr7 128409485 CALU chr7 128409481 Exonic hg19 NA AA524793 Out-of-frame Intra-chr q32.1 q32.1 112311 ChimerSeq ChiTaRs ChiTaRs ASTN2-ASTN2 ASTN2 chr9 119520576 ASTN2 chr9 119520492 Exonic hg19 NA AA493853 Out-of-frame Intra-chr q33.1 q33.1 112312 ChimerSeq ChiTaRs ChiTaRs TMEM9-TMEM9 TMEM9 chr1 201104308 TMEM9 chr1 201104459 Exonic hg19 NA AA642063 Out-of-frame Intra-chr q32.1 q32.1 112313 ChimerSeq ChiTaRs ChiTaRs NRF1-NRF1 NRF1 chr7 129377095 NRF1 chr7 129376917 Exonic hg19 NA AA503463 Out-of-frame Intra-chr q32.2 Tumor suppressor gene Transcription factor q32.2 Tumor suppressor gene Transcription factor 112314 ChimerSeq ChiTaRs ChiTaRs PHF20L1-RAD51AP1 PHF20L1 chr8 133845419 RAD51AP1 chr12 4648072 Exonic hg19 NA AA263143 Out-of-frame Inter-chr q24.22 p13.32 112315 ChimerSeq ChiTaRs ChiTaRs SMPD4-MDH1 SMPD4 chr2 130939151 MDH1 chr2 63821620 Exonic hg19 NA AA315813 Out-of-frame Intra-chr q21.1 p15 112316 ChimerSeq ChiTaRs ChiTaRs GPATCH2-GPATCH2 GPATCH2 chr1 217765596 GPATCH2 chr1 217765582 Exonic hg19 NA AA535213 Out-of-frame Intra-chr q41 q41 112317 ChimerSeq ChiTaRs ChiTaRs SLC25A26-NAA25 SLC25A26 chr3 66418922 NAA25 chr12 112465454 Exonic hg19 NA AA319253 Out-of-frame Inter-chr q24.13 112318 ChimerSeq ChiTaRs ChiTaRs TRPS1-TRPS1 TRPS1 chr8 116537020 TRPS1 chr8 116537027 Exonic hg19 NA AA543013 Out-of-frame Intra-chr q23.3 Transcription factor q23.3 Transcription factor 112319 ChimerSeq ChiTaRs ChiTaRs CFH-TP53INP1 CFH chr1 196644936 TP53INP1 chr8 95939254 Exonic hg19 NA AA312953 Out-of-frame Inter-chr q31.3 q22.1 Tumor suppressor gene 112320 ChimerSeq ChiTaRs ChiTaRs ITGA2-ITGA2 ITGA2 chr5 52294905 ITGA2 chr5 52294494 Exonic hg19 NA AA587833 Out-of-frame Intra-chr q11.2 q11.2 112321 ChimerSeq ChiTaRs ChiTaRs NFYC-STK25 NFYC chr1 41223966 STK25 chr2 242439260 Exonic hg19 NA AA085593 Out-of-frame Inter-chr p34.2 Transcription factor q37.3 112322 ChimerSeq ChiTaRs ChiTaRs OPHN1-AKIRIN1 OPHN1 chrX 67353076 AKIRIN1 chr1 39466658 Exonic hg19 NA AA160383 Out-of-frame Inter-chr q12 p34.3 112323 ChimerSeq ChiTaRs ChiTaRs WAC-WAC WAC chr10 28879726 WAC chr10 28824527 Exonic hg19 NA AA343573 Out-of-frame Intra-chr p12.1 p12.1 112324 ChimerSeq ChiTaRs ChiTaRs FAM19A1-LYST FAM19A1 chr3 68550279 LYST chr1 235992117 Exonic hg19 NA AA412313 Out-of-frame Inter-chr p14.1 q42.3 112325 ChimerSeq ChiTaRs ChiTaRs HOOK1-HOOK1 HOOK1 chr1 60340135 HOOK1 chr1 60340131 Exonic hg19 NA AA188823 Out-of-frame Intra-chr p32.1 p32.1 112326 ChimerSeq ChiTaRs ChiTaRs CELF2-WDR3 CELF2 chr10 11375552 WDR3 chr1 118496670 Exonic hg19 NA AA639533 Out-of-frame Inter-chr p14 p12 112327 ChimerSeq ChiTaRs ChiTaRs COL3A1-COL6A3 COL3A1 chr2 189876782 COL6A3 chr2 238245123 Exonic hg19 NA AA055353 Out-of-frame Intra-chr q32.2 q37.3 112328 ChimerSeq ChiTaRs ChiTaRs SOSTDC1-SOSTDC1 SOSTDC1 chr7 16505331 SOSTDC1 chr7 16502556 Exonic hg19 NA AA457413 Out-of-frame Intra-chr p21.1 p21.1 112329 ChimerSeq ChiTaRs ChiTaRs MCCC1-PTPN14 MCCC1 chr3 182747860 PTPN14 chr1 214598488 Exonic hg19 NA AA505323 Out-of-frame Inter-chr q27.1 q41 112330 ChimerSeq ChiTaRs ChiTaRs STEAP2-STEAP2 STEAP2 chr7 89864818 STEAP2 chr7 89864813 Exonic hg19 NA AA523333 Out-of-frame Intra-chr q21.13 q21.13 112331 ChimerSeq ChiTaRs ChiTaRs CALU-CALU CALU chr7 128409485 CALU chr7 128409479 Exonic hg19 NA AA513493 Out-of-frame Intra-chr q32.1 q32.1 112332 ChimerSeq ChiTaRs ChiTaRs MAP4-HSPA8 MAP4 chr3 47912490 HSPA8 chr11 122930412 Exonic hg19 NA AA063643 Out-of-frame Inter-chr p21.31 q24.1 112333 ChimerSeq ChiTaRs ChiTaRs PCDH7-PCDH7 PCDH7 chr4 30896041 PCDH7 chr4 30895790 Exonic hg19 NA AA468303 Out-of-frame Intra-chr p15.1 p15.1 112334 ChimerSeq ChiTaRs ChiTaRs PLEC-LOC643339 PLEC chr8 144997206 LOC643339 chr12 93760359 Exonic hg19 NA AA151973 Out-of-frame Inter-chr q24.3 112335 ChimerSeq ChiTaRs ChiTaRs IL1RN-PARP4 IL1RN chr2 113891591 PARP4 chr13 25026176 Exonic hg19 NA AA527443 Out-of-frame Inter-chr q14.1 q12.12 112336 ChimerSeq ChiTaRs ChiTaRs INTS5-INTS5 INTS5 chr11 62414418 INTS5 chr11 62414548 Exonic hg19 NA AA204683 Out-of-frame Intra-chr q12.3 q12.3 112337 ChimerSeq ChiTaRs ChiTaRs CYB5R1-CYB5R1 CYB5R1 chr1 202932857 CYB5R1 chr1 202931228 Exonic hg19 NA AA452663 Out-of-frame Intra-chr q32.1 q32.1 112338 ChimerSeq ChiTaRs ChiTaRs SLITRK2-SLITRK2 SLITRK2 chrX 144906841 SLITRK2 chrX 144906538 Exonic hg19 NA AA449213 Out-of-frame Intra-chr q27.3 q27.3 112339 ChimerSeq ChiTaRs ChiTaRs OSBPL9-OSBPL9 OSBPL9 chr1 52249652 OSBPL9 chr1 52246956 Exonic hg19 NA AA654943 Out-of-frame Intra-chr p32.3 p32.3 112340 ChimerSeq ChiTaRs ChiTaRs ZMAT2-ACTG1 ZMAT2 chr5 140086255 ACTG1 chr17 79478270 Exonic hg19 NA AA595243 Out-of-frame Inter-chr q31.3 q25.3 112341 ChimerSeq ChiTaRs ChiTaRs HNRNPA2B1-HNRNPA2B1 HNRNPA2B1 chr7 26229737 HNRNPA2B1 chr7 26229547 Exonic hg19 NA AA482823 Out-of-frame Intra-chr p15.2 p15.2 112342 ChimerSeq ChiTaRs ChiTaRs VCAN-ST6GALNAC2 VCAN chr5 82814878 ST6GALNAC2 chr17 74562133 Exonic hg19 NA AA234873 Out-of-frame Inter-chr q14.2 q25.1 112343 ChimerSeq ChiTaRs ChiTaRs C5orf42-RPN2 C5orf42 chr5 37201819 RPN2 chr20 35812749 Exonic hg19 NA AA367913 Out-of-frame Inter-chr p13.2 q11.23 112344 ChimerSeq ChiTaRs ChiTaRs RBMS1-APC RBMS1 chr2 161349942 APC chr5 112178709 Exonic hg19 NA AA418863 Out-of-frame Inter-chr q24.2 q22.2 Oncogene Tumor suppressor gene 112345 ChimerSeq ChiTaRs ChiTaRs EIF2AK3-EIF2AK3 EIF2AK3 chr2 88874555 EIF2AK3 chr2 88870474 Exonic hg19 NA AA214233 Out-of-frame Intra-chr p11.2 p11.2 112346 ChimerSeq ChiTaRs ChiTaRs RAB6B-RAB6B RAB6B chr3 133544206 RAB6B chr3 133545272 Exonic hg19 NA AA427473 Out-of-frame Intra-chr q22.1 q22.1 112347 ChimerSeq ChiTaRs ChiTaRs ZKSCAN1-ABCG2 ZKSCAN1 chr7 99630076 ABCG2 chr4 89072429 Exonic hg19 NA AA001604 Out-of-frame Inter-chr q22.1 Transcription factor q22.1 Tumor suppressor gene 112348 ChimerSeq ChiTaRs ChiTaRs MSH6-MSH6 MSH6 chr2 48018264 MSH6 chr2 48028827 Exonic hg19 NA AA001996 Out-of-frame Intra-chr p16.3 Oncogene p16.3 Oncogene 112349 ChimerSeq ChiTaRs ChiTaRs ATP11B-GCLC ATP11B chr3 182639415 GCLC chr6 53363169 Exonic hg19 NA AA010005 Out-of-frame Inter-chr q26.33 Oncogene p12.1 112350 ChimerSeq ChiTaRs ChiTaRs CCT3-TRAF3IP1 CCT3 chr1 156307005 TRAF3IP1 chr2 239309092 Exonic hg19 NA AA010637 Out-of-frame Inter-chr q22 q37.3 112351 ChimerSeq ChiTaRs ChiTaRs ZBTB22-PLCG1 ZBTB22 chr6 4514523 PLCG1 chr20 39795329 Exonic hg19 NA AA018565 Out-of-frame Inter-chr Transcription factor q12 Oncogene 112352 ChimerSeq ChiTaRs ChiTaRs TNFSF10-RASA1 TNFSF10 chr3 172233260 RASA1 chr5 86687069 Exonic hg19 NA AA043924 Out-of-frame Inter-chr q26.31 q14.3 112353 ChimerSeq ChiTaRs ChiTaRs KCTD7-C6orf62 KCTD7 chr7 66105704 C6orf62 chr6 24711622 Exonic hg19 NA AA046787 Out-of-frame Inter-chr q11.21 p22.3 112354 ChimerSeq ChiTaRs ChiTaRs UBTD2-SLC38A1 UBTD2 chr5 171691089 SLC38A1 chr12 46579047 Exonic hg19 NA AA053204 Out-of-frame Inter-chr q35.1 q13.11 112355 ChimerSeq ChiTaRs ChiTaRs STON1-GTF2A1L-STON1-GTF2A1L STON1-GTF2A1L chr2 48761332 STON1-GTF2A1L chr2 48761392 Exonic hg19 NA AA063164 Out-of-frame Intra-chr p16.3 p16.3 112356 ChimerSeq ChiTaRs ChiTaRs YWHAG-YWHAG YWHAG chr7 75974121 YWHAG chr7 75974114 Exonic hg19 NA AA078674 Out-of-frame Intra-chr q11.23 q11.23 112357 ChimerSeq ChiTaRs ChiTaRs HOXA10-HOXA9-HOXA10-HOXA9 HOXA10-HOXA9 chr7 27211484 HOXA10-HOXA9 chr7 27211104 Exonic hg19 NA AA079374 Out-of-frame Intra-chr Transcription factor Transcription factor 112358 ChimerSeq ChiTaRs ChiTaRs CYFIP2-CYFIP2 CYFIP2 chr5 156820311 CYFIP2 chr5 156817565 Exonic hg19 NA AA095535 Out-of-frame Intra-chr q33.3 q33.3 112359 ChimerSeq ChiTaRs ChiTaRs TSC22D3-TSC22D3 TSC22D3 chrX 106957239 TSC22D3 chrX 106957271 Exonic hg19 NA AA098994 Out-of-frame Intra-chr q22.3 q22.3 112360 ChimerSeq ChiTaRs ChiTaRs SH3KBP1-SLC44A3 SH3KBP1 chrX 19831832 SLC44A3 chr1 95357470 Exonic hg19 NA AA102165 Out-of-frame Inter-chr p22.12 p21.3 112361 ChimerSeq ChiTaRs ChiTaRs UBE2T-ATP5B UBE2T chr1 202304780 ATP5B chr12 57031962 Exonic hg19 NA AA128804 Out-of-frame Inter-chr q32.1 q13.3 112362 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-LOC401093 INS-IGF2 chr11 2150511 LOC401093 chr3 151985184 Exonic hg19 NA AA136475 Out-of-frame Inter-chr p15.5 Oncogene 112363 ChimerSeq ChiTaRs ChiTaRs IRS1-C12orf40 IRS1 chr2 227600969 C12orf40 chr12 40099483 Exonic hg19 NA AA136914 Out-of-frame Inter-chr q36.3 q12 112364 ChimerSeq ChiTaRs ChiTaRs TGFBI-HLA-C TGFBI chr5 135398965 HLA-C chr6 2617088 Exonic hg19 NA AA166724 Out-of-frame Inter-chr q31.1 Tumor suppressor gene 112365 ChimerSeq ChiTaRs ChiTaRs KIAA1147-LRRC7 KIAA1147 chr7 141361042 LRRC7 chr1 70346300 Exonic hg19 NA AA169324 Out-of-frame Inter-chr p31.1 112366 ChimerSeq ChiTaRs ChiTaRs MTDH-MTDH MTDH chr8 98735263 MTDH chr8 98703180 Exonic hg19 NA AA171915 Out-of-frame Intra-chr q22.1 q22.1 112367 ChimerSeq ChiTaRs ChiTaRs RTN4-RTN4 RTN4 chr2 55201877 RTN4 chr2 55199995 Exonic hg19 NA AA180924 Out-of-frame Intra-chr p16.1 Tumor suppressor gene p16.1 Tumor suppressor gene 112368 ChimerSeq ChiTaRs ChiTaRs ZFR-ZFR ZFR chr5 32355996 ZFR chr5 32355911 Exonic hg19 NA AA181535 Out-of-frame Intra-chr p13.3 p13.3 112369 ChimerSeq ChiTaRs ChiTaRs MIR548N-FAM98A MIR548N chr2 179397925 FAM98A chr2 33808761 Exonic hg19 NA AA197045 Out-of-frame Intra-chr p14.2 p22.3 112370 ChimerSeq ChiTaRs ChiTaRs RAC1-RAC1 RAC1 chr7 6443436 RAC1 chr7 6443438 Exonic hg19 NA AA205195 Out-of-frame Intra-chr p22.1 Oncogene p22.1 Oncogene 112371 ChimerSeq ChiTaRs ChiTaRs PCOLCE-PCOLCE PCOLCE chr7 100205770 PCOLCE chr7 100205086 Exonic hg19 NA AA226265 Out-of-frame Intra-chr q22.1 q22.1 112372 ChimerSeq ChiTaRs ChiTaRs BCL10-CLTA BCL10 chr1 85732413 CLTA chr9 36211963 Exonic hg19 NA AA227674 Out-of-frame Inter-chr p22.3 Oncogene Tumor suppressor gene p13.3 112373 ChimerSeq ChiTaRs ChiTaRs FARS2-FARS2 FARS2 chr6 5467002 FARS2 chr6 5466665 Exonic hg19 NA AA230275 Out-of-frame Intra-chr p25.1 p25.1 112374 ChimerSeq ChiTaRs ChiTaRs PDS5A-ABLIM1 PDS5A chr4 39861563 ABLIM1 chr10 116197931 Exonic hg19 NA AA243665 Out-of-frame Inter-chr p14 q25.3 112375 ChimerSeq ChiTaRs ChiTaRs PDE1C-PDE1C PDE1C chr7 31825812 PDE1C chr7 31829557 Exonic hg19 NA AA247844 Out-of-frame Intra-chr p14.3 p14.3 112376 ChimerSeq ChiTaRs ChiTaRs CD74-CD74 CD74 chr5 149781727 CD74 chr5 149781205 Exonic hg19 NA AA262125 Out-of-frame Intra-chr q33.1 q33.1 112377 ChimerSeq ChiTaRs ChiTaRs INTS5-INTS5 INTS5 chr11 62414418 INTS5 chr11 62414448 Exonic hg19 NA AA262395 Out-of-frame Intra-chr q12.3 q12.3 112378 ChimerSeq ChiTaRs ChiTaRs EIF4EBP2-EIF4EBP2 EIF4EBP2 chr10 72187809 EIF4EBP2 chr10 72187291 Exonic hg19 NA AA278954 Out-of-frame Intra-chr q22.1 q22.1 112379 ChimerSeq ChiTaRs ChiTaRs TTC1-TTC1 TTC1 chr5 159492542 TTC1 chr5 159476638 Exonic hg19 NA AA288024 Out-of-frame Intra-chr q33.3 q33.3 112380 ChimerSeq ChiTaRs ChiTaRs CLU-CLU CLU chr8 27455762 CLU chr8 27461815 Exonic hg19 NA AA291054 Out-of-frame Intra-chr p21.1 Tumor suppressor gene p21.1 Tumor suppressor gene 112381 ChimerSeq ChiTaRs ChiTaRs ANKRD6-UBE3C ANKRD6 chr6 90171638 UBE3C chr7 156950887 Exonic hg19 NA AA295305 Out-of-frame Inter-chr q15 q36.3 112382 ChimerSeq ChiTaRs ChiTaRs TBC1D14-TBC1D14 TBC1D14 chr4 7012481 TBC1D14 chr4 7008357 Exonic hg19 NA AA300225 Out-of-frame Intra-chr p16.1 p16.1 112383 ChimerSeq ChiTaRs ChiTaRs UNC5C-UNC5C UNC5C chr4 96366435 UNC5C chr4 96368445 Exonic hg19 NA AA319525 Out-of-frame Intra-chr q22.3 Tumor suppressor gene q22.3 Tumor suppressor gene 112384 ChimerSeq ChiTaRs ChiTaRs USP11-USP11 USP11 chrX 47107350 USP11 chrX 47104451 Exonic hg19 NA AA322974 Out-of-frame Intra-chr p11.3 p11.3 112385 ChimerSeq ChiTaRs ChiTaRs ZRSR2-CNTNAP2 ZRSR2 chrX 15809288 CNTNAP2 chr7 146162230 Exonic hg19 NA AA323715 Out-of-frame Inter-chr p22.2 Tumor suppressor gene 112386 ChimerSeq ChiTaRs ChiTaRs RQCD1-RQCD1 RQCD1 chr2 219445255 RQCD1 chr2 219433702 Exonic hg19 NA AA324744 Out-of-frame Intra-chr 112387 ChimerSeq ChiTaRs ChiTaRs PAK2-LOC646214 PAK2 chr3 196534704 LOC646214 chr15 21937802 Exonic hg19 NA AA325254 Out-of-frame Inter-chr q29 STE:STE20 112388 ChimerSeq ChiTaRs ChiTaRs NBPF14-STK10 NBPF14 chr1 145274046 STK10 chr5 171513175 Exonic hg19 NA AA328334 Out-of-frame Inter-chr q21.2 q35.1 Tumor suppressor gene 112389 ChimerSeq ChiTaRs ChiTaRs CEP85L-DAB2IP CEP85L chr6 118953541 DAB2IP chr9 124509859 Exonic hg19 NA AA329915 Out-of-frame Inter-chr q22.31 q33.2 Tumor suppressor gene 112390 ChimerSeq ChiTaRs ChiTaRs NEK4-CD3EAP NEK4 chr3 52776170 CD3EAP chr19 45910890 Exonic hg19 NA AA335265 Out-of-frame Inter-chr p21.1 Other:NEK q13.32 112391 ChimerSeq ChiTaRs ChiTaRs TSPAN14-TSPAN14 TSPAN14 chr10 82278647 TSPAN14 chr10 82278428 Exonic hg19 NA AA343945 Out-of-frame Intra-chr q23.1 q23.1 112392 ChimerSeq ChiTaRs ChiTaRs EGFR-EGFR EGFR chr7 55167434 EGFR chr7 55167411 Exonic hg19 NA AA344434 Out-of-frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 TK:EGFR Oncogene 112393 ChimerSeq ChiTaRs ChiTaRs CCDC28B-PLEKHG1 CCDC28B chr1 32670793 PLEKHG1 chr6 151003671 Exonic hg19 NA AA344455 Out-of-frame Inter-chr p35.2 q25.1 112394 ChimerSeq ChiTaRs ChiTaRs PEX16-PEX16 PEX16 chr11 45939367 PEX16 chr11 45937368 Exonic hg19 NA AA357684 Out-of-frame Intra-chr p11.2 p11.2 112395 ChimerSeq ChiTaRs ChiTaRs MOB2-PRRC2C MOB2 chr11 1776199 PRRC2C chr1 171504625 Exonic hg19 NA AA368515 Out-of-frame Inter-chr p15.5 q24.3 112396 ChimerSeq ChiTaRs ChiTaRs MAN1A2-ZYX MAN1A2 chr1 117911078 ZYX chr7 143087669 Exonic hg19 NA AA368655 Out-of-frame Inter-chr p12 q34 Tumor suppressor gene 112397 ChimerSeq ChiTaRs ChiTaRs FOXO4-FOXO4 FOXO4 chrX 70323384 FOXO4 chrX 70320758 Exonic hg19 NA AA368925 3'UTR-CDS Intra-chr q13.1 Tumor suppressor gene Transcription factor q13.1 Tumor suppressor gene Transcription factor 112398 ChimerSeq ChiTaRs ChiTaRs GNPDA1-PPP2R2B GNPDA1 chr5 141380644 PPP2R2B chr5 146299111 Exonic hg19 NA AA383455 Out-of-frame Intra-chr q31.3 q32 112399 ChimerSeq ChiTaRs ChiTaRs PSMB2-PSMB2 PSMB2 chr1 36068796 PSMB2 chr1 36101927 Exonic hg19 NA AA393815 Out-of-frame Intra-chr p34.3 p34.3 112400 ChimerSeq ChiTaRs ChiTaRs AIMP1-CALM1 AIMP1 chr4 107268924 CALM1 chr14 90871714 Exonic hg19 NA AA421615 Out-of-frame Inter-chr q24 Tumor suppressor gene q32.11 112401 ChimerSeq ChiTaRs ChiTaRs SERINC1-PALLD SERINC1 chr6 122765837 PALLD chr4 169847900 Exonic hg19 NA AA425614 Out-of-frame Inter-chr q22.31 q32.3 112402 ChimerSeq ChiTaRs ChiTaRs SPEN-SPEN SPEN chr1 16266321 SPEN chr1 16266318 Exonic hg19 NA AA426315 Out-of-frame Intra-chr p36.21 Transcription factor p36.21 Transcription factor 112403 ChimerSeq ChiTaRs ChiTaRs LOC730091-SEMA4D LOC730091 chr3 156527798 SEMA4D chr9 92065377 Exonic hg19 NA AA442974 Out-of-frame Inter-chr q22.2 112404 ChimerSeq ChiTaRs ChiTaRs PFDN6-UHRF2 PFDN6 chr6 4490952 UHRF2 chr9 6475468 Exonic hg19 NA AA449365 Out-of-frame Inter-chr p24.1 Tumor suppressor gene 112405 ChimerSeq ChiTaRs ChiTaRs PINK1-PINK1 PINK1 chr1 20974787 PINK1 chr1 20975657 Exonic hg19 NA AA449854 Out-of-frame Intra-chr p36.12 Other:NKF2 p36.12 Other:NKF2 112406 ChimerSeq ChiTaRs ChiTaRs HDLBP-RPS14 HDLBP chr2 242179226 RPS14 chr5 149823849 Exonic hg19 NA AA450315 Out-of-frame Inter-chr q37.3 q33.1 112407 ChimerSeq ChiTaRs ChiTaRs CFH-VKORC1L1 CFH chr1 196658157 VKORC1L1 chr7 65378095 Exonic hg19 NA AA461475 Out-of-frame Inter-chr q31.3 q11.21 112408 ChimerSeq ChiTaRs ChiTaRs KDM5C-PSMB7 KDM5C chrX 53221536 PSMB7 chr9 127115749 Exonic hg19 NA AA488934 Out-of-frame Inter-chr p11.22 Oncogene q33.3 112409 ChimerSeq ChiTaRs ChiTaRs ZFAND2B-ZFAND2B ZFAND2B chr2 220074077 ZFAND2B chr2 220074145 Exonic hg19 NA AA491105 Out-of-frame Intra-chr q35 q35 112410 ChimerSeq ChiTaRs ChiTaRs SAR1B-SAR1B SAR1B chr5 133936921 SAR1B chr5 133936917 Exonic hg19 NA AA491604 Out-of-frame Intra-chr q31.1 q31.1 112411 ChimerSeq ChiTaRs ChiTaRs TBC1D13-TYK2 TBC1D13 chr9 131558294 TYK2 chr19 10471981 Exonic hg19 NA AA494324 Out-of-frame Inter-chr q34.11 p13.2 TK:JakA 112412 ChimerSeq ChiTaRs ChiTaRs ELOVL7-ELOVL7 ELOVL7 chr5 60048184 ELOVL7 chr5 60047982 Exonic hg19 NA AA506314 Out-of-frame Intra-chr q12.1 q12.1 112413 ChimerSeq ChiTaRs ChiTaRs XPO7-XPO7 XPO7 chr8 21821872 XPO7 chr8 21821561 Exonic hg19 NA AA514694 Out-of-frame Intra-chr p21.3 p21.3 112414 ChimerSeq ChiTaRs ChiTaRs LOC100288428-LOC100288428 LOC100288428 chr3 8402170 LOC100288428 chr3 8401850 Exonic hg19 NA AA525495 Out-of-frame Intra-chr 112415 ChimerSeq ChiTaRs ChiTaRs NDUFAF2-NDUFAF2 NDUFAF2 chr5 60334288 NDUFAF2 chr5 60334036 Exonic hg19 NA AA526464 Out-of-frame Intra-chr q12.1 q12.1 112416 ChimerSeq ChiTaRs ChiTaRs ATG4C-ATG4C ATG4C chr1 63330394 ATG4C chr1 63330098 Exonic hg19 NA AA526524 Out-of-frame Intra-chr p31.3 p31.3 112417 ChimerSeq ChiTaRs ChiTaRs NUP98-NUP98 NUP98 chr11 3759472 NUP98 chr11 3759452 Exonic hg19 NA AA527634 Out-of-frame Intra-chr p15.4 Oncogene Tumor suppressor gene p15.4 Oncogene Tumor suppressor gene 112418 ChimerSeq ChiTaRs ChiTaRs CREBRF-CREBRF CREBRF chr5 172495907 CREBRF chr5 172495554 Exonic hg19 NA AA528405 Out-of-frame Intra-chr q35.1 q35.1 112419 ChimerSeq ChiTaRs ChiTaRs RTCA-LOC100506451 RTCA chr1 100758325 LOC100506451 chr12 26105975 Exonic hg19 NA AA532445 3'UTR-3'UTR Inter-chr p21.2 112420 ChimerSeq ChiTaRs ChiTaRs NT5DC1-NT5DC1 NT5DC1 chr6 116431852 NT5DC1 chr6 116431899 Exonic hg19 NA AA534024 Out-of-frame Intra-chr q22.1 q22.1 112421 ChimerSeq ChiTaRs ChiTaRs RAB2A-MYH9 RAB2A chr8 61429762 MYH9 chr22 36696271 Exonic hg19 NA AA535244 Out-of-frame Inter-chr q12.1 q12.3 Oncogene Tumor suppressor gene 112422 ChimerSeq ChiTaRs ChiTaRs CDCP1-CAMLG CDCP1 chr3 45125166 CAMLG chr5 134077315 Exonic hg19 NA AA535734 Out-of-frame Inter-chr p21.31 Tumor suppressor gene q31.1 112423 ChimerSeq ChiTaRs ChiTaRs RNPEPL1-RNPEPL1 RNPEPL1 chr2 241516041 RNPEPL1 chr2 241514448 Exonic hg19 NA AA559954 Out-of-frame Intra-chr q37.3 q37.3 112424 ChimerSeq ChiTaRs ChiTaRs HBP1-HBP1 HBP1 chr7 106840871 HBP1 chr7 106840862 Exonic hg19 NA AA560005 Out-of-frame Intra-chr Tumor suppressor gene Transcription factor Tumor suppressor gene Transcription factor 112425 ChimerSeq ChiTaRs ChiTaRs TMEM59-TMEM59 TMEM59 chr1 54502379 TMEM59 chr1 54502354 Exonic hg19 NA AA568505 Out-of-frame Intra-chr p32.3 p32.3 112426 ChimerSeq ChiTaRs ChiTaRs SLC39A13-SLC39A13 SLC39A13 chr11 47437708 SLC39A13 chr11 47437698 Exonic hg19 NA AA568975 Out-of-frame Intra-chr p11.2 p11.2 112427 ChimerSeq ChiTaRs ChiTaRs EPS15-EPS15 EPS15 chr1 51822317 EPS15 chr1 51822308 Exonic hg19 NA AA572905 Out-of-frame Intra-chr p32.3 p32.3 112428 ChimerSeq ChiTaRs ChiTaRs ITLN1-ACSL5 ITLN1 chr1 160846537 ACSL5 chr10 114171678 Exonic hg19 NA AA573864 Out-of-frame Inter-chr q23.3 q25.2 112429 ChimerSeq ChiTaRs ChiTaRs GLUL-GLUL GLUL chr1 182352225 GLUL chr1 182352045 Exonic hg19 NA AA581184 Out-of-frame Intra-chr q25.3 q25.3 112430 ChimerSeq ChiTaRs ChiTaRs SPIDR-SPIDR SPIDR chr8 48574501 SPIDR chr8 48573935 Exonic hg19 NA AA584154 Out-of-frame Intra-chr q11.21 q11.21 112431 ChimerSeq ChiTaRs ChiTaRs SERPINB6-SERPINB6 SERPINB6 chr6 2959500 SERPINB6 chr6 2959508 Exonic hg19 NA AA593035 Out-of-frame Intra-chr p25.2 p25.2 112432 ChimerSeq ChiTaRs ChiTaRs TNFSF4-FAM169A TNFSF4 chr1 173174018 FAM169A chr5 74183871 Exonic hg19 NA AA593554 Out-of-frame Inter-chr q25.1 q13.3 112433 ChimerSeq ChiTaRs ChiTaRs SMG7-SMG7 SMG7 chr1 183523326 SMG7 chr1 183522874 Exonic hg19 NA AA598525 Out-of-frame Intra-chr q25.3 q25.3 112434 ChimerSeq ChiTaRs ChiTaRs BAI2-WWOX BAI2 chr1 32198471 WWOX chr16 79191840 Exonic hg19 NA AA601175 Out-of-frame Inter-chr q23.1 Tumor suppressor gene 112435 ChimerSeq ChiTaRs ChiTaRs SLC25A24-NYAP2 SLC25A24 chr1 108726371 NYAP2 chr2 226528205 Exonic hg19 NA AA601185 Out-of-frame Inter-chr q36.3 112436 ChimerSeq ChiTaRs ChiTaRs ANXA4-ANXA4 ANXA4 chr2 70030892 ANXA4 chr2 70030524 Exonic hg19 NA AA601894 Out-of-frame Intra-chr p13.3 p13.3 112437 ChimerSeq ChiTaRs ChiTaRs CMBL-FAM76A CMBL chr5 10279785 FAM76A chr1 28064261 Exonic hg19 NA AA602984 Out-of-frame Inter-chr p15.2 p35.3 112438 ChimerSeq ChiTaRs ChiTaRs MAML3-MAML3 MAML3 chr4 140855698 MAML3 chr4 140855802 Exonic hg19 NA AA603544 Out-of-frame Intra-chr q31.1 q31.1 112439 ChimerSeq ChiTaRs ChiTaRs FXR1-CTSA FXR1 chr3 180633888 CTSA chr20 44520937 Exonic hg19 NA AA625344 Out-of-frame Inter-chr q26.33 q13.12 112440 ChimerSeq ChiTaRs ChiTaRs FARSB-BTBD7 FARSB chr2 223436735 BTBD7 chr14 93749228 Exonic hg19 NA AA628074 Out-of-frame Inter-chr q36.1 112441 ChimerSeq ChiTaRs ChiTaRs CITED4-CCNK CITED4 chr1 41326876 CCNK chr14 99967163 Exonic hg19 NA AA630424 Out-of-frame Inter-chr p34.2 q32.2 112442 ChimerSeq ChiTaRs ChiTaRs SDC2-SDC2 SDC2 chr8 97622867 SDC2 chr8 97622639 Exonic hg19 NA AA632874 Out-of-frame Intra-chr q22.1 q22.1 112443 ChimerSeq ChiTaRs ChiTaRs MLL3-MLL3 MLL3 chr7 151832417 MLL3 chr7 151832033 Exonic hg19 NA AA639194 Out-of-frame Intra-chr Tumor suppressor gene Tumor suppressor gene 112444 ChimerSeq ChiTaRs ChiTaRs SSR4-SSR4 SSR4 chrX 153063887 SSR4 chrX 153063879 Exonic hg19 NA AA640985 Out-of-frame Intra-chr q28 q28 112445 ChimerSeq ChiTaRs ChiTaRs CCDC66-LOC401082 CCDC66 chr3 56596073 LOC401082 chr3 109189887 Exonic hg19 NA AA642304 Out-of-frame Intra-chr p14.3 112446 ChimerSeq ChiTaRs ChiTaRs EIF3H-EIF3H EIF3H chr8 117669516 EIF3H chr8 117661089 Exonic hg19 NA AA648095 Out-of-frame Intra-chr q24.11 q24.11 112447 ChimerSeq ChiTaRs ChiTaRs LUC7L2-LUC7L2 LUC7L2 chr7 139107551 LUC7L2 chr7 139107540 Exonic hg19 NA AA649594 Out-of-frame Intra-chr q34 q34 112448 ChimerSeq ChiTaRs ChiTaRs ARID1B-ARID1B ARID1B chr6 157199466 ARID1B chr6 157199499 Exonic hg19 NA AA654925 Out-of-frame Intra-chr q25.3 Oncogene q25.3 Oncogene 112449 ChimerSeq ChiTaRs ChiTaRs FLNB-FLNB FLNB chr3 58155422 FLNB chr3 58154164 Exonic hg19 NA AA658515 Out-of-frame Intra-chr p14.3 p14.3 112450 ChimerSeq ChiTaRs ChiTaRs RGS5-UBL3 RGS5 chr1 163256916 UBL3 chr13 30339816 Exonic hg19 NA AA665524 Out-of-frame Inter-chr q23.3 q12.3 112451 ChimerSeq ChiTaRs ChiTaRs KCNJ3-KCNJ3 KCNJ3 chr2 155646241 KCNJ3 chr2 155652633 Exonic hg19 NA AA682965 Out-of-frame Intra-chr q24.1 q24.1 112452 ChimerSeq ChiTaRs ChiTaRs CREB3L2-CREB3L2 CREB3L2 chr7 137585858 CREB3L2 chr7 137569869 Exonic hg19 NA AA694015 Out-of-frame Intra-chr q33 Transcription factor q33 Transcription factor 112453 ChimerSeq ChiTaRs ChiTaRs H6PD-PEX14 H6PD chr1 9331392 PEX14 chr1 10659965 Exonic hg19 NA AA701254 Out-of-frame Intra-chr p36.22 p36.22 112454 ChimerSeq ChiTaRs ChiTaRs USP24-NFAT5 USP24 chr1 55533635 NFAT5 chr16 69600241 Exonic hg19 NA AA703115 Out-of-frame Inter-chr p32.3 q22.1 Transcription factor 112455 ChimerSeq ChiTaRs ChiTaRs SLC30A9-SLC30A9 SLC30A9 chr4 42068638 SLC30A9 chr4 42069148 Exonic hg19 NA AA721604 Out-of-frame Intra-chr p13 p13 112456 ChimerSeq ChiTaRs ChiTaRs AP2M1-AP2M1 AP2M1 chr3 183901458 AP2M1 chr3 183901509 Exonic hg19 NA AA743965 Out-of-frame Intra-chr q27.1 q27.1 112457 ChimerSeq ChiTaRs ChiTaRs IWS1-IWS1 IWS1 chr2 128238494 IWS1 chr2 128238675 Exonic hg19 NA AA748505 Out-of-frame Intra-chr q14.3 q14.3 112458 ChimerSeq ChiTaRs ChiTaRs UGP2-UGP2 UGP2 chr2 64099003 UGP2 chr2 64104747 Exonic hg19 NA AA765965 Out-of-frame Intra-chr p15 p15 112459 ChimerSeq ChiTaRs ChiTaRs STEAP2-SEC23A STEAP2 chr7 89863764 SEC23A chr14 39524422 Exonic hg19 NA AA774945 Out-of-frame Inter-chr q21.13 q21.1 112460 ChimerSeq ChiTaRs ChiTaRs LOC100131060-ABLIM1 LOC100131060 chr1 59357988 ABLIM1 chr10 116194504 Exonic hg19 NA AA779425 Out-of-frame Inter-chr q25.3 112461 ChimerSeq ChiTaRs ChiTaRs MAMLD1-MAMLD1 MAMLD1 chrX 149639048 MAMLD1 chrX 149680818 Exonic hg19 NA AA779765 Out-of-frame Intra-chr q28 q28 112462 ChimerSeq ChiTaRs ChiTaRs MTA2-SPIDR MTA2 chr11 62360804 SPIDR chr8 48626778 Exonic hg19 NA AA808215 Out-of-frame Inter-chr q12.3 q11.21 112463 ChimerSeq ChiTaRs ChiTaRs ZNF124-ELMO1 ZNF124 chr1 247319019 ELMO1 chr7 37483683 Exonic hg19 NA AA829405 Out-of-frame Inter-chr q44 Transcription factor p14.1 112464 ChimerSeq ChiTaRs ChiTaRs KCNAB2-KCNAB2 KCNAB2 chr1 6161240 KCNAB2 chr1 6159301 Exonic hg19 NA AA833885 Out-of-frame Intra-chr p36.31 p36.31 112465 ChimerSeq ChiTaRs ChiTaRs PFKFB3-PFKFB3 PFKFB3 chr10 6277443 PFKFB3 chr10 6277268 Exonic hg19 NA AA847065 Out-of-frame Intra-chr p15.1 p15.1 112466 ChimerSeq ChiTaRs ChiTaRs MUC1-MUC1 MUC1 chr1 155160534 MUC1 chr1 155160771 Exonic hg19 NA AA847094 Out-of-frame Intra-chr q22 Oncogene q22 Oncogene 112467 ChimerSeq ChiTaRs ChiTaRs HRH1-MRPL51 HRH1 chr3 11209853 MRPL51 chr12 6601595 Exonic hg19 NA AA872664 Out-of-frame Inter-chr p25.3 p13.31 112468 ChimerSeq ChiTaRs ChiTaRs UBA1-PRTFDC1 UBA1 chrX 47074529 PRTFDC1 chr10 25162530 Exonic hg19 NA AA883605 Out-of-frame Inter-chr p11.3 p12.1 112469 ChimerSeq ChiTaRs ChiTaRs TAF5L-B4GALT5 TAF5L chr1 229729242 B4GALT5 chr20 48252844 Exonic hg19 NA AA902204 Out-of-frame Inter-chr q42.13 q13.13 112470 ChimerSeq ChiTaRs ChiTaRs PHF3-PHF3 PHF3 chr6 64416661 PHF3 chr6 64416645 Exonic hg19 NA AA931544 Out-of-frame Intra-chr q12 q12 112471 ChimerSeq ChiTaRs ChiTaRs ADCYAP1R1-ADCYAP1R1 ADCYAP1R1 chr7 31150777 ADCYAP1R1 chr7 31150812 Exonic hg19 NA AA931674 Out-of-frame Intra-chr p14.3 p14.3 112472 ChimerSeq ChiTaRs ChiTaRs TMEM181-TMEM181 TMEM181 chr6 159056057 TMEM181 chr6 159055708 Exonic hg19 NA AA932875 Out-of-frame Intra-chr q25.3 q25.3 112473 ChimerSeq ChiTaRs ChiTaRs NBAS-ARL6IP5 NBAS chr2 15307392 ARL6IP5 chr3 69138902 Exonic hg19 NA AA934385 Out-of-frame Inter-chr p24.3 p14.1 Tumor suppressor gene 112474 ChimerSeq ChiTaRs ChiTaRs RPL34-IQCJ RPL34 chr4 109546412 IQCJ chr3 158826972 Exonic hg19 NA AA954224 Out-of-frame Inter-chr q25 q25.32 112475 ChimerSeq ChiTaRs ChiTaRs RAB3GAP1-ILDR2 RAB3GAP1 chr2 135926780 ILDR2 chr1 166884911 Exonic hg19 NA AA961434 Out-of-frame Inter-chr q21.3 q24.1 112476 ChimerSeq ChiTaRs ChiTaRs APBB3-RASSF4 APBB3 chr5 139938125 RASSF4 chr10 45480335 Exonic hg19 NA AA976815 Out-of-frame Inter-chr q31.3 q11.21 Tumor suppressor gene 112477 ChimerSeq ChiTaRs ChiTaRs DDX39B-HIVEP1 DDX39B chr6 2843408 HIVEP1 chr6 12022673 Exonic hg19 NA AA984135 Out-of-frame Intra-chr p24.1 Tumor suppressor gene Transcription factor 112478 ChimerSeq ChiTaRs ChiTaRs SENP6-HMP19 SENP6 chr6 76344509 HMP19 chr5 173491665 Exonic hg19 NA AA984354 Out-of-frame Inter-chr q14.1 q35.2 112479 ChimerSeq ChiTaRs ChiTaRs NDUFS3-SLC26A7 NDUFS3 chr11 47606114 SLC26A7 chr8 92375701 Exonic hg19 NA AA992584 Out-of-frame Inter-chr p11.2 q21.3 112480 ChimerSeq ChiTaRs ChiTaRs ADAMTSL4-MAT2A ADAMTSL4 chr1 150533409 MAT2A chr2 85769031 Exonic hg19 NA AA992625 Out-of-frame Inter-chr q21.2 p11.2 Tumor suppressor gene 112481 ChimerSeq ChiTaRs ChiTaRs KCNIP4-FLRT2 KCNIP4 chr4 21781637 FLRT2 chr14 86087721 Exonic hg19 NA AB007865 Out-of-frame Inter-chr p15.2 q31.3 112482 ChimerSeq ChiTaRs ChiTaRs ZNF644-ZNF644 ZNF644 chr1 91447929 ZNF644 chr1 91406473 Exonic hg19 NA AB019255 Out-of-frame Intra-chr p22.2 Transcription factor p22.2 Transcription factor 112483 ChimerSeq ChiTaRs ChiTaRs FGFR2-FGFR2 FGFR2 chr10 123357750 FGFR2 chr10 123259078 Exonic hg19 NA AB030075 Out-of-frame Intra-chr q26.13 TK:FGFR Oncogene q26.13 TK:FGFR Oncogene 112484 ChimerSeq ChiTaRs ChiTaRs JPX-ATXN7L1 JPX chrX 73228878 ATXN7L1 chr7 105245514 Exonic hg19 NA AB033044 Out-of-frame Inter-chr q13.2 q22.3 112485 ChimerSeq ChiTaRs ChiTaRs CTTNBP2NL-SEPT2 CTTNBP2NL chr1 113000173 2002_ 9_ 1_ chr2 242262850 Exonic hg19 NA AB037854 Out-of-frame Inter-chr p13.2 112486 ChimerSeq ChiTaRs ChiTaRs NBPF9-NBPF11 NBPF9 chr1 144994925 NBPF11 chr1 147917467 Exonic hg19 NA AB042555 Out-of-frame Intra-chr q21.2 q21.2 112487 ChimerSeq ChiTaRs ChiTaRs SETD5-SETD5 SETD5 chr3 9475668 SETD5 chr3 9475687 Exonic hg19 NA AB051544 Out-of-frame Intra-chr p25.3 p25.3 112488 ChimerSeq ChiTaRs ChiTaRs CALD1-CALD1 CALD1 chr7 134655392 CALD1 chr7 134654718 Exonic hg19 NA AB062484 Out-of-frame Intra-chr q33 q33 112489 ChimerSeq ChiTaRs ChiTaRs PPARD-PPARD PPARD chr6 35349859 PPARD chr6 35348725 Exonic hg19 NA AF038234 Out-of-frame Intra-chr p21.31 Transcription factor p21.31 Transcription factor 112490 ChimerSeq ChiTaRs ChiTaRs EVI5-TMEM26 EVI5 chr1 93257961 TMEM26 chr10 63200869 Exonic hg19 NA AF042345 5'UTR-CDS Inter-chr p22.1 q21.2 112491 ChimerSeq ChiTaRs ChiTaRs SLC4A7-SLC4A7 SLC4A7 chr3 27478997 SLC4A7 chr3 27416881 Exonic hg19 NA AF053755 Out-of-frame Intra-chr p24.1 p24.1 112492 ChimerSeq ChiTaRs ChiTaRs APOA2-PFKFB2 APOA2 chr1 161192731 PFKFB2 chr1 207221981 Exonic hg19 NA AF063569 Out-of-frame Intra-chr q23.3 q32.1 112493 ChimerSeq ChiTaRs ChiTaRs TMEM108-CHD3 TMEM108 chr3 132790259 CHD3 chr17 7788214 Exonic hg19 NA AF064844 Out-of-frame Inter-chr q22.1 p13.1 112494 ChimerSeq ChiTaRs ChiTaRs UBAC1-UBAC1 UBAC1 chr9 138847228 UBAC1 chr9 138824815 Exonic hg19 NA AF068195 Out-of-frame Intra-chr q34.3 q34.3 112495 ChimerSeq ChiTaRs ChiTaRs UBE2H-CFH UBE2H chr7 129577896 CFH chr1 196626337 Exonic hg19 NA AF074645 Out-of-frame Inter-chr q32.2 q31.3 112496 ChimerSeq ChiTaRs ChiTaRs RWDD1-ADK RWDD1 chr6 116914431 ADK chr10 75960241 Exonic hg19 NA AF092134 Out-of-frame Inter-chr q22.1 q22.2 112497 ChimerSeq ChiTaRs ChiTaRs TF-ALB TF chr3 133490909 ALB chr4 74279289 Exonic hg19 NA AF116645 Out-of-frame Inter-chr q22.1 q13.3 112498 ChimerSeq ChiTaRs ChiTaRs RPRD2-MED12 RPRD2 chr1 150407462 MED12 chrX 70338573 Exonic hg19 NA AF117755 Out-of-frame Inter-chr q21.2 q13.1 Oncogene 112499 ChimerSeq ChiTaRs ChiTaRs FBXO9-FASN FBXO9 chr6 52962684 FASN chr17 80036214 Exonic hg19 NA AF155114 Out-of-frame Inter-chr p12.1 q25.3 112500 ChimerSeq ChiTaRs ChiTaRs DCTN4-DCTN4 DCTN4 chr5 150090527 DCTN4 chr5 150088310 Exonic hg19 NA AF156165 Out-of-frame Intra-chr q33.1 q33.1 112501 ChimerSeq ChiTaRs ChiTaRs PCNP-MKRN2 PCNP chr3 101304669 MKRN2 chr3 12598595 Exonic hg19 NA AF161555 Out-of-frame Intra-chr q12.3 p25.2 112502 ChimerSeq ChiTaRs ChiTaRs MTHFD1L-MTHFD1L MTHFD1L chr6 151329970 MTHFD1L chr6 151324685 Exonic hg19 NA AF190155 Out-of-frame Intra-chr q25.1 q25.1 112503 ChimerSeq ChiTaRs ChiTaRs DYNLT1-USP15 DYNLT1 chr6 159058734 USP15 chr12 62698419 Exonic hg19 NA AF236714 Out-of-frame Inter-chr q25.3 q14.1 112504 ChimerSeq ChiTaRs ChiTaRs SLC35A4-SLC35A4 SLC35A4 chr5 139945056 SLC35A4 chr5 139944476 Exonic hg19 NA AF445025 Out-of-frame Intra-chr q31.3 q31.3 112505 ChimerSeq ChiTaRs ChiTaRs UNC5D-TEX2 UNC5D chr8 35652174 TEX2 chr17 62225031 Exonic hg19 NA AF466364 Out-of-frame Inter-chr p12 Tumor suppressor gene q23.3 112506 ChimerSeq ChiTaRs ChiTaRs OFCC1-OFCC1 OFCC1 chr6 9849354 OFCC1 chr6 9842749 Exonic hg19 NA AF548114 Out-of-frame Intra-chr p24.3 p24.3 112507 ChimerSeq ChiTaRs ChiTaRs SH3D19-ACSL4 SH3D19 chr4 152075164 ACSL4 chrX 108960709 Exonic hg19 NA AI038265 Out-of-frame Inter-chr q31.3 q23 112508 ChimerSeq ChiTaRs ChiTaRs LUC7L2-CHD2 LUC7L2 chr7 139030541 CHD2 chr15 93567992 Exonic hg19 NA AI078265 Out-of-frame Inter-chr q34 q26.1 112509 ChimerSeq ChiTaRs ChiTaRs ARID4B-DDX21 ARID4B chr1 235491267 DDX21 chr10 70733401 Exonic hg19 NA AI079824 Out-of-frame Inter-chr q42.3 q22.1 112510 ChimerSeq ChiTaRs ChiTaRs SGK1-IGFBP4 SGK1 chr6 134490471 IGFBP4 chr17 38609318 Exonic hg19 NA AI090154 Out-of-frame Inter-chr q23.2 AGC:SGK Oncogene q21.2 Tumor suppressor gene 112511 ChimerSeq ChiTaRs ChiTaRs MLANA-RPTOR MLANA chr9 5909824 RPTOR chr17 78578839 Exonic hg19 NA AI094034 Out-of-frame Inter-chr p24.1 q25.3 112512 ChimerSeq ChiTaRs ChiTaRs EIF2AK3-UGT2B4 EIF2AK3 chr2 88922517 UGT2B4 chr4 70345883 Exonic hg19 NA AI114505 Out-of-frame Inter-chr p11.2 q13.3 112513 ChimerSeq ChiTaRs ChiTaRs ALB-ALB ALB chr4 74285332 ALB chr4 74279251 Exonic hg19 NA AI114654 Out-of-frame Intra-chr q13.3 q13.3 112514 ChimerSeq ChiTaRs ChiTaRs RERE-LRMP RERE chr1 8421140 LRMP chr12 25233570 Exonic hg19 NA AI122684 Out-of-frame Inter-chr p36.23 p12.1 Tumor suppressor gene 112515 ChimerSeq ChiTaRs ChiTaRs NFASC-BOLA2 NFASC chr1 204832185 BOLA2 chr16 29821578 Exonic hg19 NA AI125135 Out-of-frame Inter-chr q32.1 p11.2 112516 ChimerSeq ChiTaRs ChiTaRs SEMA6A-TEAD1 SEMA6A chr5 115781995 TEAD1 chr11 12696339 Exonic hg19 NA AI126955 Out-of-frame Inter-chr q23.1 p15.3 Transcription factor 112517 ChimerSeq ChiTaRs ChiTaRs NBPF11-NBPF11 NBPF11 chr1 147745215 NBPF11 chr1 147775600 Exonic hg19 NA AI128644 Out-of-frame Intra-chr q21.2 q21.2 112518 ChimerSeq ChiTaRs ChiTaRs AHSG-CD74 AHSG chr3 186339104 CD74 chr5 149781249 Exonic hg19 NA AI133275 Out-of-frame Inter-chr q27.3 q33.1 112519 ChimerSeq ChiTaRs ChiTaRs CT45A4-FRMD4A CT45A4 chrX 134874766 FRMD4A chr10 13720136 Exonic hg19 NA AI133694 Out-of-frame Inter-chr p13 112520 ChimerSeq ChiTaRs ChiTaRs SLC30A6-UGGT1 SLC30A6 chr2 32446808 UGGT1 chr2 128948993 Exonic hg19 NA AI148255 Out-of-frame Intra-chr p22.3 q14.3 112521 ChimerSeq ChiTaRs ChiTaRs PHKA1-PHKA1 PHKA1 chrX 71800553 PHKA1 chrX 71800508 Exonic hg19 NA AI174654 Out-of-frame Intra-chr q13.1 q13.1 112522 ChimerSeq ChiTaRs ChiTaRs CRTAP-FGG CRTAP chr3 33174186 FGG chr4 155528018 Exonic hg19 NA AI174865 Out-of-frame Inter-chr p22.3 q32.1 112523 ChimerSeq ChiTaRs ChiTaRs COL1A2-TCF4 COL1A2 chr7 94060440 TCF4 chr18 52894388 Exonic hg19 NA AI190855 Out-of-frame Inter-chr q21.3 q21.2 Tumor suppressor gene Transcription factor 112524 ChimerSeq ChiTaRs ChiTaRs HTT-HTT HTT chr4 3210623 HTT chr4 3209091 Exonic hg19 NA AI201664 Out-of-frame Intra-chr p16.3 p16.3 112525 ChimerSeq ChiTaRs ChiTaRs VGLL4-VGLL4 VGLL4 chr3 11600166 VGLL4 chr3 11599590 Exonic hg19 NA AI202435 Out-of-frame Intra-chr p25.2 p25.2 112526 ChimerSeq ChiTaRs ChiTaRs APOA2-SND1 APOA2 chr1 161193414 SND1 chr7 127732510 Exonic hg19 NA AI207725 Out-of-frame Inter-chr q23.3 q32.1 112527 ChimerSeq ChiTaRs ChiTaRs SPCS1-NTM SPCS1 chr3 52742184 NTM chr11 131404621 Exonic hg19 NA AI221915 Out-of-frame Inter-chr p21.1 q25 112528 ChimerSeq ChiTaRs ChiTaRs CDKL2-ULK4 CDKL2 chr4 76540566 ULK4 chr3 41704257 Exonic hg19 NA AI223964 Out-of-frame Inter-chr q21.1 CMGC:CDKL p22.1 Other:ULK 112529 ChimerSeq ChiTaRs ChiTaRs CALD1-CALD1 CALD1 chr7 134552745 CALD1 chr7 134553684 Exonic hg19 NA AI245514 Out-of-frame Intra-chr q33 q33 112530 ChimerSeq ChiTaRs ChiTaRs TMEM176A-ZNF407 TMEM176A chr7 150502202 ZNF407 chr18 72691603 Exonic hg19 NA AI282294 Out-of-frame Inter-chr q36.1 q22.3 Transcription factor 112531 ChimerSeq ChiTaRs ChiTaRs ZDHHC3-C2orf72 ZDHHC3 chr3 44957056 C2orf72 chr2 231905047 Exonic hg19 NA AI286195 Out-of-frame Inter-chr q37.1 112532 ChimerSeq ChiTaRs ChiTaRs AHNAK-ATP1A1 AHNAK chr11 62283570 ATP1A1 chr1 116936186 Exonic hg19 NA AI300525 Out-of-frame Inter-chr q12.3 Tumor suppressor gene p13.1 112533 ChimerSeq ChiTaRs ChiTaRs GNB2L1-FN1 GNB2L1 chr5 180665134 FN1 chr2 216274401 Exonic hg19 NA AI334064 Out-of-frame Inter-chr Tumor suppressor gene q35 Oncogene 112534 ChimerSeq ChiTaRs ChiTaRs LOC729041-CIB1 LOC729041 chr1 46911373 CIB1 chr15 90776524 Exonic hg19 NA AI337334 Out-of-frame Inter-chr q26.1 112535 ChimerSeq ChiTaRs ChiTaRs ABL2-COPG1 ABL2 chr1 179171237 COPG1 chr3 128984562 Exonic hg19 NA AI339254 Out-of-frame Inter-chr q25.2 TK:Abl Oncogene q21.3 112536 ChimerSeq ChiTaRs ChiTaRs TLN1-KCTD12 TLN1 chr9 35697494 KCTD12 chr13 77456517 Exonic hg19 NA AI343584 Out-of-frame Inter-chr p13.3 q22.3 112537 ChimerSeq ChiTaRs ChiTaRs PKD2-SASH1 PKD2 chr4 88968734 SASH1 chr6 148870770 Exonic hg19 NA AI343884 Out-of-frame Inter-chr q22.1 CAMK:PKD q24.3 Tumor suppressor gene 112538 ChimerSeq ChiTaRs ChiTaRs ECE1-ECE1 ECE1 chr1 21546082 ECE1 chr1 21545738 Exonic hg19 NA AI343944 Out-of-frame Intra-chr p36.12 p36.12 112539 ChimerSeq ChiTaRs ChiTaRs PPP1R3B-GATA2 PPP1R3B chr8 8993854 GATA2 chr3 128204254 Exonic hg19 NA AI344454 Out-of-frame Inter-chr p23.1 q21.3 Oncogene Transcription factor 112540 ChimerSeq ChiTaRs ChiTaRs RBP7-MS4A7 RBP7 chr1 10070455 MS4A7 chr11 60161840 Exonic hg19 NA AI356564 Out-of-frame Inter-chr p36.22 q12.2 112541 ChimerSeq ChiTaRs ChiTaRs RPP14-STK11 RPP14 chr3 58305359 STK11 chr19 1224484 Exonic hg19 NA AI365374 Out-of-frame Inter-chr p14.3 p13.3 Oncogene Tumor suppressor gene 112542 ChimerSeq ChiTaRs ChiTaRs UNC13B-RANGAP1 UNC13B chr9 35218477 RANGAP1 chr22 41681149 Exonic hg19 NA AI379205 Out-of-frame Inter-chr p13.3 q13.2 112543 ChimerSeq ChiTaRs ChiTaRs RASSF4-BPGM RASSF4 chr10 45471902 BPGM chr7 134363981 Exonic hg19 NA AI380175 Out-of-frame Inter-chr q11.21 Tumor suppressor gene q33 112544 ChimerSeq ChiTaRs ChiTaRs GNB2L1-WASF2 GNB2L1 chr5 180665117 WASF2 chr1 27733064 Exonic hg19 NA AI380294 Out-of-frame Inter-chr Tumor suppressor gene p36.11 112545 ChimerSeq ChiTaRs ChiTaRs NSUN3-GSPT1 NSUN3 chr3 93832011 GSPT1 chr16 11981741 Exonic hg19 NA AI391565 Out-of-frame Inter-chr q11.2 p13.13 112546 ChimerSeq ChiTaRs ChiTaRs DARS-DARS DARS chr2 136672907 DARS chr2 136671520 Exonic hg19 NA AI393124 Out-of-frame Intra-chr q21.3 q21.3 112547 ChimerSeq ChiTaRs ChiTaRs FAIM3-PSMF1 FAIM3 chr1 207080459 PSMF1 chr20 1145725 Exonic hg19 NA AI418115 Out-of-frame Inter-chr p13 112548 ChimerSeq ChiTaRs ChiTaRs POR-ATP2B4 POR chr7 75616173 ATP2B4 chr1 203710426 Exonic hg19 NA AI419535 3'UTR-3'UTR Inter-chr q11.23 q32.1 112549 ChimerSeq ChiTaRs ChiTaRs TNS3-APOOL TNS3 chr7 47367110 APOOL chrX 84347343 Exonic hg19 NA AI421364 Out-of-frame Inter-chr p12.3 q21.1 112550 ChimerSeq ChiTaRs ChiTaRs FMO2-FMO2 FMO2 chr1 171176903 FMO2 chr1 171173038 Exonic hg19 NA AI452615 Out-of-frame Intra-chr q24.3 q24.3 112551 ChimerSeq ChiTaRs ChiTaRs PRKCD-PRKCD PRKCD chr3 53226733 PRKCD chr3 53217182 Exonic hg19 NA AI457515 3'UTR-CDS Intra-chr p21.1 Tumor suppressor gene p21.1 Tumor suppressor gene 112552 ChimerSeq ChiTaRs ChiTaRs SDCCAG8-SDCCAG8 SDCCAG8 chr1 243554091 SDCCAG8 chr1 243554506 Exonic hg19 NA AI469144 Out-of-frame Intra-chr 112553 ChimerSeq ChiTaRs ChiTaRs CMTM6-CMTM6 CMTM6 chr3 32544339 CMTM6 chr3 32524998 Exonic hg19 NA AI471964 Out-of-frame Intra-chr p22.3 p22.3 112554 ChimerSeq ChiTaRs ChiTaRs DPP6-DTNA DPP6 chr7 154685186 DTNA chr18 32470629 Exonic hg19 NA AI500195 Out-of-frame Inter-chr q12.1 112555 ChimerSeq ChiTaRs ChiTaRs SEC31A-FUBP1 SEC31A chr4 83814364 FUBP1 chr1 78443241 Exonic hg19 NA AI523884 Out-of-frame Inter-chr q21.22 p31.1 Oncogene 112556 ChimerSeq ChiTaRs ChiTaRs NOP16-NOP16 NOP16 chr5 175811335 NOP16 chr5 175811370 Exonic hg19 NA AI582725 Out-of-frame Intra-chr q35.2 q35.2 112557 ChimerSeq ChiTaRs ChiTaRs MFAP3-MFAP3 MFAP3 chr5 153435579 MFAP3 chr5 153435952 Exonic hg19 NA AI619694 Out-of-frame Intra-chr q33.2 q33.2 112558 ChimerSeq ChiTaRs ChiTaRs CALD1-CALD1 CALD1 chr7 134655392 CALD1 chr7 134654989 Exonic hg19 NA AI628315 Out-of-frame Intra-chr q33 q33 112559 ChimerSeq ChiTaRs ChiTaRs DNAJB2-IFRD1 DNAJB2 chr2 220151622 IFRD1 chr7 112090765 Exonic hg19 NA AI631194 3'UTR-CDS Inter-chr q35 q31.1 112560 ChimerSeq ChiTaRs ChiTaRs ARMC8-USP40 ARMC8 chr3 137906828 USP40 chr2 234398020 Exonic hg19 NA AI631514 Out-of-frame Inter-chr q22.3 q37.1 112561 ChimerSeq ChiTaRs ChiTaRs CALU-GPR19 CALU chr7 128410630 GPR19 chr12 12815346 Exonic hg19 NA AI650365 Out-of-frame Inter-chr q32.1 p13.1 112562 ChimerSeq ChiTaRs ChiTaRs NAV1-NAV1 NAV1 chr1 201794455 NAV1 chr1 201795766 Exonic hg19 NA AI651824 Out-of-frame Intra-chr q32.1 q32.1 112563 ChimerSeq ChiTaRs ChiTaRs EML3-DGKA EML3 chr11 62369856 DGKA chr12 56324991 Exonic hg19 NA AI653235 Out-of-frame Inter-chr q12.3 q13.2 112564 ChimerSeq ChiTaRs ChiTaRs CAMK2N1-ABCD3 CAMK2N1 chr1 20809860 ABCD3 chr1 94945510 Exonic hg19 NA AI653395 Out-of-frame Intra-chr p36.12 Tumor suppressor gene p21.3 112565 ChimerSeq ChiTaRs ChiTaRs MRPS18B-NPIPB7 MRPS18B chr6 1926451 NPIPB7 chr16 28975450 Exonic hg19 NA AI655595 Out-of-frame Inter-chr p12.1 112566 ChimerSeq ChiTaRs ChiTaRs LRRTM4-TRAF3IP3 LRRTM4 chr2 77082048 TRAF3IP3 chr1 209952108 Exonic hg19 NA AI656375 Out-of-frame Inter-chr p12 q32.2 112567 ChimerSeq ChiTaRs ChiTaRs CLU-ZNF238 CLU chr8 27455605 ZNF238 chr1 244217169 Exonic hg19 NA AI656735 Out-of-frame Inter-chr p21.1 Tumor suppressor gene Tumor suppressor gene 112568 ChimerSeq ChiTaRs ChiTaRs CHMP2B-MYH9 CHMP2B chr3 87303064 MYH9 chr22 36678673 Exonic hg19 NA AI686345 Out-of-frame Inter-chr p11.2 q12.3 Oncogene Tumor suppressor gene 112569 ChimerSeq ChiTaRs ChiTaRs NDUFA10-NDUFA10 NDUFA10 chr2 240900331 NDUFA10 chr2 240900328 Exonic hg19 NA AI733764 Out-of-frame Intra-chr 112570 ChimerSeq ChiTaRs ChiTaRs EIF5B-GCN1L1 EIF5B chr2 99993099 GCN1L1 chr12 120565542 Exonic hg19 NA AI739405 CDS-3'UTR Inter-chr q11.2 112571 ChimerSeq ChiTaRs ChiTaRs CYBRD1-CYBRD1 CYBRD1 chr2 172413092 CYBRD1 chr2 172412209 Exonic hg19 NA AI743715 Out-of-frame Intra-chr q31.1 q31.1 112572 ChimerSeq ChiTaRs ChiTaRs NFIA-NFIA NFIA chr1 61923282 NFIA chr1 61922513 Exonic hg19 NA AI750575 Out-of-frame Intra-chr p31.3 Transcription factor p31.3 Transcription factor 112573 ChimerSeq ChiTaRs ChiTaRs IVNS1ABP-IVNS1ABP IVNS1ABP chr1 185267149 IVNS1ABP chr1 185267154 Exonic hg19 NA AI750915 Out-of-frame Intra-chr q25.3 q25.3 112574 ChimerSeq ChiTaRs ChiTaRs UBE2J1-UBE2J1 UBE2J1 chr6 90052119 UBE2J1 chr6 90039252 Exonic hg19 NA AI751105 Out-of-frame Intra-chr q15 q15 112575 ChimerSeq ChiTaRs ChiTaRs YWHAZ-ABCC3 YWHAZ chr8 101951657 ABCC3 chr17 48721338 Exonic hg19 NA AI761355 Out-of-frame Inter-chr q22.3 q21.33 112576 ChimerSeq ChiTaRs ChiTaRs STAG2-STAG2 STAG2 chrX 123164898 STAG2 chrX 123164874 Exonic hg19 NA DQ655920 Out-of-frame Intra-chr q25 Oncogene q25 Oncogene 112577 ChimerSeq ChiTaRs ChiTaRs MAML3-FADS3 MAML3 chr4 140954053 FADS3 chr11 61640998 Exonic hg19 NA AA262103 Out-of-frame Inter-chr q31.1 q12.2 112578 ChimerSeq ChiTaRs ChiTaRs PRKDC-FAU PRKDC chr8 48792421 FAU chr11 64888102 Exonic hg19 NA AA469444 Out-of-frame Inter-chr q11.21 Oncogene q13.1 112579 ChimerSeq ChiTaRs ChiTaRs RPS27A-UBE3C RPS27A chr2 55462743 UBE3C chr7 156985035 Exonic hg19 NA BM312306 Out-of-frame Inter-chr p16.1 q36.3 112580 ChimerSeq ChiTaRs ChiTaRs USP48-ZFAND6 USP48 chr1 22096375 ZFAND6 chr15 80415043 Exonic hg19 NA T78059 Out-of-frame Inter-chr p36.12 q25.1 112581 ChimerSeq ChiTaRs ChiTaRs BCYRN1-BCYRN1 BCYRN1 chrX 70445034 BCYRN1 chrX 70444676 Exonic hg19 NA AA484807 Out-of-frame Intra-chr p21 p21 112582 ChimerSeq ChiTaRs ChiTaRs CTNNB1-MRPS33 CTNNB1 chr3 41281235 MRPS33 chr7 140706014 Exonic hg19 NA BE835337 Out-of-frame Inter-chr p22.1 Oncogene q34 112583 ChimerSeq ChiTaRs ChiTaRs CPNE4-CPNE4 CPNE4 chr3 131253937 CPNE4 chr3 131253593 Exonic hg19 NA AA894897 Out-of-frame Intra-chr q22.1 q22.1 112584 ChimerSeq ChiTaRs ChiTaRs RAP1A-SEL1L RAP1A chr1 112203680 SEL1L chr14 81964757 Exonic hg19 NA BF329177 Out-of-frame Inter-chr p13.2 Tumor suppressor gene q31.1 112585 ChimerSeq ChiTaRs ChiTaRs BCYRN1-BCYRN1 BCYRN1 chrX 70473941 BCYRN1 chrX 70470281 Exonic hg19 NA W22697 Out-of-frame Intra-chr p21 p21 112586 ChimerSeq ChiTaRs ChiTaRs TM4SF19-BAZ2A TM4SF19 chr3 196048813 BAZ2A chr12 57008959 Exonic hg19 NA BF900417 Out-of-frame Inter-chr q29 q13.3 Transcription factor 112587 ChimerSeq ChiTaRs ChiTaRs CCDC120-PPP1R13L CCDC120 chrX 48922582 PPP1R13L chr19 45883448 Exonic hg19 NA BF915897 Out-of-frame Inter-chr p11.23 q13.32 112588 ChimerSeq ChiTaRs ChiTaRs COL4A6-ZNF589 COL4A6 chrX 107654161 ZNF589 chr3 48309898 Exonic hg19 NA BE835987 Out-of-frame Inter-chr q22.3 p21.31 Transcription factor 112589 ChimerSeq ChiTaRs ChiTaRs NOL8-SPTB NOL8 chr9 95082313 SPTB chr14 65231312 Exonic hg19 NA R10937 Out-of-frame Inter-chr q22.31 q23.3 112590 ChimerSeq ChiTaRs ChiTaRs DEPDC1B-RTDR1 DEPDC1B chr5 59981877 RTDR1 chr22 23425567 Exonic hg19 NA BF886767 Out-of-frame Inter-chr q12.1 112591 ChimerSeq ChiTaRs ChiTaRs PPP1R21-GNGT1 PPP1R21 chr2 48734469 GNGT1 chr7 93518478 Exonic hg19 NA BI050757 Out-of-frame Inter-chr p16.3 q21.3 112592 ChimerSeq ChiTaRs ChiTaRs KIAA0232-USP54 KIAA0232 chr4 6812809 USP54 chr10 75277350 Exonic hg19 NA BQ376517 Out-of-frame Inter-chr p16.1 q22.2 112593 ChimerSeq ChiTaRs ChiTaRs UBR2-MECOM UBR2 chr6 42577387 MECOM chr3 169318081 Exonic hg19 NA DB359907 Out-of-frame Inter-chr p21.1 q26.2 Transcription factor 112594 ChimerSeq ChiTaRs ChiTaRs IGFBP3-ANTXR2 IGFBP3 chr7 45952180 ANTXR2 chr4 80828557 Exonic hg19 NA DB318377 Out-of-frame Inter-chr p12.3 Tumor suppressor gene q21.21 112595 ChimerSeq ChiTaRs ChiTaRs SPARCL1-GBAS SPARCL1 chr4 88450358 GBAS chr7 56047621 Exonic hg19 NA DA235147 Out-of-frame Inter-chr q22.1 Tumor suppressor gene 112596 ChimerSeq ChiTaRs ChiTaRs GNB1-LCP1 GNB1 chr1 1809197 LCP1 chr13 46700163 Exonic hg19 NA BI026317 Out-of-frame Inter-chr p36.33 q14.13 112597 ChimerSeq ChiTaRs ChiTaRs CRY2-CRY2 CRY2 chr11 45902704 CRY2 chr11 45903117 Exonic hg19 NA W26687 Out-of-frame Intra-chr p11.2 p11.2 112598 ChimerSeq ChiTaRs ChiTaRs ACSL4-ACSL4 ACSL4 chrX 108885542 ACSL4 chrX 108885008 Exonic hg19 NA BG924677 Out-of-frame Intra-chr q23 q23 112599 ChimerSeq ChiTaRs ChiTaRs FRAS1-LRRC8D FRAS1 chr4 79245469 LRRC8D chr1 90324009 Exonic hg19 NA T05837 Out-of-frame Inter-chr q21.21 p22.2 112600 ChimerSeq ChiTaRs ChiTaRs EIF2S3-H19 EIF2S3 chrX 24095924 H19 chr11 2018904 Exonic hg19 NA BG774247 Out-of-frame Inter-chr p22.11 p15.5 Tumor suppressor gene 112601 ChimerSeq ChiTaRs ChiTaRs FBXO32-MYEOV FBXO32 chr8 124516964 MYEOV chr11 69155834 Exonic hg19 NA BF828657 Out-of-frame Inter-chr q24.13 Tumor suppressor gene q13.3 112602 ChimerSeq ChiTaRs ChiTaRs STK17B-SLC4A2 STK17B chr2 197035252 SLC4A2 chr7 150768322 Exonic hg19 NA AA368687 Out-of-frame Inter-chr q32.3 q36.1 112603 ChimerSeq ChiTaRs ChiTaRs SHC3-KRT7 SHC3 chr9 91675033 KRT7 chr12 52629123 Exonic hg19 NA BQ322767 Out-of-frame Inter-chr q22.1 q13.13 112604 ChimerSeq ChiTaRs ChiTaRs IMMT-IMMT IMMT chr2 86371423 IMMT chr2 86371551 Exonic hg19 NA BU685307 Out-of-frame Intra-chr p11.2 p11.2 112605 ChimerSeq ChiTaRs ChiTaRs CNN3-CNN3 CNN3 chr1 95362836 CNN3 chr1 95362513 Exonic hg19 NA BF340377 Out-of-frame Intra-chr p21.3 p21.3 112606 ChimerSeq ChiTaRs ChiTaRs FHL3-APOA2 FHL3 chr1 38462846 APOA2 chr1 161192762 Exonic hg19 NA AI336287 Out-of-frame Intra-chr p34.3 q23.3 112607 ChimerSeq ChiTaRs ChiTaRs PPARGC1A-NXN PPARGC1A chr4 23865979 NXN chr17 702928 Exonic hg19 NA AA047637 Out-of-frame Inter-chr p15.2 p13.3 112608 ChimerSeq ChiTaRs ChiTaRs ARID1B-ARID1B ARID1B chr6 157431698 ARID1B chr6 157431611 Exonic hg19 NA BI000767 Out-of-frame Intra-chr q25.3 Oncogene q25.3 Oncogene 112609 ChimerSeq ChiTaRs ChiTaRs TMEM33-ZNF451 TMEM33 chr4 41962285 ZNF451 chr6 56971722 Exonic hg19 NA AW993517 Out-of-frame Inter-chr p13 p12.1 Transcription factor 112610 ChimerSeq ChiTaRs ChiTaRs IMMT-IMMT IMMT chr2 86408463 IMMT chr2 86400834 Exonic hg19 NA BE159547 Out-of-frame Intra-chr p11.2 p11.2 112611 ChimerSeq ChiTaRs ChiTaRs WDPCP-AFTPH WDPCP chr2 63383897 AFTPH chr2 64803780 Exonic hg19 NA AA281427 Out-of-frame Intra-chr p15 p14 112612 ChimerSeq ChiTaRs ChiTaRs OFD1-OFD1 OFD1 chrX 13778804 OFD1 chrX 13785279 Exonic hg19 NA DN918267 Out-of-frame Intra-chr p22.2 p22.2 112613 ChimerSeq ChiTaRs ChiTaRs ADI1-ADI1 ADI1 chr2 3502414 ADI1 chr2 3502395 Exonic hg19 NA CK904967 Out-of-frame Intra-chr 112614 ChimerSeq ChiTaRs ChiTaRs NCOA2-KLHL28 NCOA2 chr8 71316063 KLHL28 chr14 45414354 Exonic hg19 NA DA677327 Out-of-frame Inter-chr q13.3 Oncogene Transcription factor q21.2 112615 ChimerSeq ChiTaRs ChiTaRs MIB2-PSMD3 MIB2 chr1 1561355 PSMD3 chr17 38145990 Exonic hg19 NA BQ361077 Out-of-frame Inter-chr p36.33 q21.1 112616 ChimerSeq ChiTaRs ChiTaRs C1orf61-ADD3 C1orf61 chr1 156381340 ADD3 chr10 111879223 Exonic hg19 NA BF924787 Out-of-frame Inter-chr q22 q25.1 112617 ChimerSeq ChiTaRs ChiTaRs LOC92249-RAB7A LOC92249 chrX 62780823 RAB7A chr3 128531213 Exonic hg19 NA AK024417 Out-of-frame Inter-chr q21.3 Tumor suppressor gene 112618 ChimerSeq ChiTaRs ChiTaRs TTL-GPC3 TTL chr2 113289983 GPC3 chrX 132690723 Exonic hg19 NA BC036707 Out-of-frame Inter-chr q14.1 q26.2 Tumor suppressor gene 112619 ChimerSeq ChiTaRs ChiTaRs TMEM245-MLL3 TMEM245 chr9 111780092 MLL3 chr7 152064654 Exonic hg19 NA BE177607 Out-of-frame Inter-chr q31.3 Tumor suppressor gene 112620 ChimerSeq ChiTaRs ChiTaRs KCNAB1-TCF7L1 KCNAB1 chr3 156254664 TCF7L1 chr2 85437747 Exonic hg19 NA X83127 Out-of-frame Inter-chr q25.31 p11.2 Oncogene Transcription factor 112621 ChimerSeq ChiTaRs ChiTaRs SSR2-AAK1 SSR2 chr1 155978997 AAK1 chr2 69746092 Exonic hg19 NA AA576517 Out-of-frame Inter-chr q22 p13.3 Other:NAK 112622 ChimerSeq ChiTaRs ChiTaRs MINOS1-PTMA MINOS1 chr1 19934638 PTMA chr2 232576675 Exonic hg19 NA BG481927 Out-of-frame Inter-chr p36.13 q37.1 112623 ChimerSeq ChiTaRs ChiTaRs PDCD4-CHRM3 PDCD4 chr10 112658603 CHRM3 chr1 239756964 Exonic hg19 NA AW367527 Out-of-frame Inter-chr q25.2 Tumor suppressor gene q43 112624 ChimerSeq ChiTaRs ChiTaRs SECISBP2-SECISBP2 SECISBP2 chr9 91949634 SECISBP2 chr9 91953387 Exonic hg19 NA AU253387 Out-of-frame Intra-chr q22.2 q22.2 112625 ChimerSeq ChiTaRs ChiTaRs PAX6-CTNNA1 PAX6 chr11 31811177 CTNNA1 chr5 138124956 Exonic hg19 NA M86017 Out-of-frame Inter-chr p13 Tumor suppressor gene Transcription factor q31.2 Oncogene 112626 ChimerSeq ChiTaRs ChiTaRs ZNF3-CLRN1-AS1 ZNF3 chr7 99671469 CLRN1-AS1 chr3 150700889 Exonic hg19 NA BI057717 Out-of-frame Inter-chr q22.1 Transcription factor q25.1 112627 ChimerSeq ChiTaRs ChiTaRs PCNXL2-PCNXL2 PCNXL2 chr1 233122223 PCNXL2 chr1 233120115 Exonic hg19 NA BE707377 Out-of-frame Intra-chr 112628 ChimerSeq ChiTaRs ChiTaRs CHRNB2-CA11 CHRNB2 chr1 154552233 CA11 chr19 49143438 Exonic hg19 NA BF954747 Out-of-frame Inter-chr q21.3 q13.33 Tumor suppressor gene 112629 ChimerSeq ChiTaRs ChiTaRs FNDC3B-FNDC3B FNDC3B chr3 171965489 FNDC3B chr3 171969230 Exonic hg19 NA CV339967 Out-of-frame Intra-chr q26.31 q26.31 112630 ChimerSeq ChiTaRs ChiTaRs SVIL-SVIL SVIL chr10 29980748 SVIL chr10 29990669 Exonic hg19 NA BG993737 Out-of-frame Intra-chr p11.23 p11.23 112631 ChimerSeq ChiTaRs ChiTaRs FANCC-NDE1 FANCC chr9 97918296 NDE1 chr16 15814717 Exonic hg19 NA AF390860 Out-of-frame Inter-chr q22.32 Oncogene p13.11 112632 ChimerSeq ChiTaRs ChiTaRs WDR1-WDR1 WDR1 chr4 10076320 WDR1 chr4 10076113 Exonic hg19 NA AA578377 Out-of-frame Intra-chr p16.1 p16.1 112633 ChimerSeq ChiTaRs ChiTaRs PLA2G2A-MLLT4 PLA2G2A chr1 20301994 MLLT4 chr6 168352397 Exonic hg19 NA BE646307 Out-of-frame Inter-chr p36.13 Tumor suppressor gene 112634 ChimerSeq ChiTaRs ChiTaRs ZNF593-UBE2A ZNF593 chr1 26497277 UBE2A chrX 118718067 Exonic hg19 NA BM462327 Out-of-frame Inter-chr p36.11 q24 112635 ChimerSeq ChiTaRs ChiTaRs EGR1-DAXX EGR1 chr5 137803395 DAXX chr6 4522216 Exonic hg19 NA CR975017 Out-of-frame Inter-chr q31.2 Tumor suppressor gene Transcription factor Oncogene 112636 ChimerSeq ChiTaRs ChiTaRs TNC-TPM1 TNC chr9 117810513 TPM1 chr15 63336262 Exonic hg19 NA Z24727 Out-of-frame Inter-chr q33.1 q22.2 112637 ChimerSeq ChiTaRs ChiTaRs ABP1-ABP1 ABP1 chr7 150554665 ABP1 chr7 150553659 Exonic hg19 NA BP274807 Out-of-frame Intra-chr 112638 ChimerSeq ChiTaRs ChiTaRs ZNF318-PPP1R9B ZNF318 chr6 43336672 PPP1R9B chr17 48211511 Exonic hg19 NA BF858817 Out-of-frame Inter-chr p21.1 Transcription factor q21.33 112639 ChimerSeq ChiTaRs ChiTaRs TTTY14-TTTY14 TTTY14 chrY 21152691 TTTY14 chrY 21152682 Exonic hg19 NA AA557757 Out-of-frame Intra-chr q11.222 q11.222 112640 ChimerSeq ChiTaRs ChiTaRs BTBD9-BTBD9 BTBD9 chr6 38312872 BTBD9 chr6 38142931 Exonic hg19 NA T77387 Out-of-frame Intra-chr p21.2 p21.2 112641 ChimerSeq ChiTaRs ChiTaRs NAP1L4-CNBP NAP1L4 chr11 3003515 CNBP chr3 128888520 Exonic hg19 NA AW796677 Out-of-frame Inter-chr q21.3 112642 ChimerSeq ChiTaRs ChiTaRs TMEM59-TMEM59 TMEM59 chr1 54497841 TMEM59 chr1 54497814 Exonic hg19 NA BU675307 Out-of-frame Intra-chr p32.3 p32.3 112643 ChimerSeq ChiTaRs ChiTaRs PTPN14-PTPN14 PTPN14 chr1 214527694 PTPN14 chr1 214527378 Exonic hg19 NA AW276697 Out-of-frame Intra-chr q41 q41 112644 ChimerSeq ChiTaRs ChiTaRs FLNA-BOLA2 FLNA chrX 153594704 BOLA2 chr16 30079965 Exonic hg19 NA BE075497 Out-of-frame Inter-chr q28 Tumor suppressor gene p11.2 112645 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-IGF2 INS-IGF2 chr11 2151815 IGF2 chr11 2159511 Exonic hg19 NA DB359087 Out-of-frame Intra-chr p15.5 p15.5 Oncogene 112646 ChimerSeq ChiTaRs ChiTaRs PHLDA3-PFKM PHLDA3 chr1 201438345 PFKM chr12 48533074 Exonic hg19 NA DA368227 Out-of-frame Inter-chr q32.1 Tumor suppressor gene q13.11 112647 ChimerSeq ChiTaRs ChiTaRs RBM18-S100A9 RBM18 chr9 125003129 S100A9 chr1 153330844 Exonic hg19 NA BF893077 Out-of-frame Inter-chr q33.2 q21.3 112648 ChimerSeq ChiTaRs ChiTaRs GADD45G-CYP11B1 GADD45G chr9 92220048 CYP11B1 chr8 143955213 Exonic hg19 NA AV704757 Out-of-frame Inter-chr q22.2 Tumor suppressor gene q24.3 112649 ChimerSeq ChiTaRs ChiTaRs TDO2-GZMB TDO2 chr4 156830093 GZMB chr14 25101153 Exonic hg19 NA BG314637 Out-of-frame Inter-chr q32.1 q12 112650 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-INS-IGF2 INS-IGF2 chr11 2150758 INS-IGF2 chr11 2151194 Exonic hg19 NA AI342437 Out-of-frame Intra-chr p15.5 p15.5 Oncogene 112651 ChimerSeq ChiTaRs ChiTaRs ILK-ILK ILK chr11 6629441 ILK chr11 6629636 Exonic hg19 NA W23047 In-Frame Intra-chr p15.4 TKL:MLK Tumor suppressor gene p15.4 TKL:MLK Tumor suppressor gene 112652 ChimerSeq ChiTaRs ChiTaRs PTPRG-LOC100294362 PTPRG chr3 61781784 LOC100294362 chr17 78370914 Exonic hg19 NA BI039247 Out-of-frame Inter-chr p14.2 112653 ChimerSeq ChiTaRs ChiTaRs USF1-USF1 USF1 chr1 161009380 USF1 chr1 161009365 Exonic hg19 NA BF905987 Out-of-frame Intra-chr q23.3 Transcription factor q23.3 Transcription factor 112654 ChimerSeq ChiTaRs ChiTaRs FN1-FN1 FN1 chr2 216236689 FN1 chr2 216226325 Exonic hg19 NA BG163577 Out-of-frame Intra-chr q35 Oncogene q35 Oncogene 112655 ChimerSeq ChiTaRs ChiTaRs FLJ39653-NCL FLJ39653 chr4 16257927 NCL chr2 232322401 Exonic hg19 NA BQ028497 Out-of-frame Inter-chr q37.1 112656 ChimerSeq ChiTaRs ChiTaRs MAEA-MAEA MAEA chr4 1320557 MAEA chr4 1319809 Exonic hg19 NA T70597 Out-of-frame Intra-chr p16.3 p16.3 112657 ChimerSeq ChiTaRs ChiTaRs NEU1-NEU1 NEU1 chr6 3160195 NEU1 chr6 3159826 Exonic hg19 NA AI368907 Out-of-frame Intra-chr 112658 ChimerSeq ChiTaRs ChiTaRs NUB1-PPP1R32 NUB1 chr7 151073084 PPP1R32 chr11 61258348 Exonic hg19 NA CD723237 Out-of-frame Inter-chr q36.1 q12.2 112659 ChimerSeq ChiTaRs ChiTaRs PTPRK-CACNB2 PTPRK chr6 128407558 CACNB2 chr10 18679996 Exonic hg19 NA BQ380638 Out-of-frame Inter-chr Tumor suppressor gene p12.33 112660 ChimerSeq ChiTaRs ChiTaRs NRBF2-RNF169 NRBF2 chr10 64912682 RNF169 chr11 74525690 Exonic hg19 NA CA397927 Out-of-frame Inter-chr q21.3 q13.4 112661 ChimerSeq ChiTaRs ChiTaRs TCEAL2-DLG2 TCEAL2 chrX 101382684 DLG2 chr11 84132425 Exonic hg19 NA AA757827 3'UTR-CDS Inter-chr q22.1 q14.1 112662 ChimerSeq ChiTaRs ChiTaRs FAM49B-FAM49B FAM49B chr8 130890221 FAM49B chr8 130887516 Exonic hg19 NA AB062477 Out-of-frame Intra-chr q24.21 q24.21 112663 ChimerSeq ChiTaRs ChiTaRs RAB1A-LUC7L3 RAB1A chr2 65357209 LUC7L3 chr17 48797049 Exonic hg19 NA BE276057 Out-of-frame Inter-chr p14 q21.33 112664 ChimerSeq ChiTaRs ChiTaRs PDLIM7-PDLIM7 PDLIM7 chr5 176918963 PDLIM7 chr5 176911113 Exonic hg19 NA AW028807 Out-of-frame Intra-chr q35.3 q35.3 112665 ChimerSeq ChiTaRs ChiTaRs HEBP2-JMJD1C HEBP2 chr6 138734291 JMJD1C chr10 65043429 Exonic hg19 NA BM968067 Out-of-frame Inter-chr q24.1 q21.3 112666 ChimerSeq ChiTaRs ChiTaRs TAF7-TAF7 TAF7 chr5 140699230 TAF7 chr5 140699298 Exonic hg19 NA BG015697 Out-of-frame Intra-chr q31.3 q31.3 112667 ChimerSeq ChiTaRs ChiTaRs PIGM-ZBTB7C PIGM chr1 160000768 ZBTB7C chr18 45853170 Exonic hg19 NA BE843437 Out-of-frame Inter-chr q23.2 q21.1 Tumor suppressor gene Transcription factor 112668 ChimerSeq ChiTaRs ChiTaRs NCDN-TMSB10 NCDN chr1 36032033 TMSB10 chr2 85132788 Exonic hg19 NA M79087 Out-of-frame Inter-chr p34.3 p11.2 112669 ChimerSeq ChiTaRs ChiTaRs LIFR-AKIRIN1 LIFR chr5 38478232 AKIRIN1 chr1 39469968 Exonic hg19 NA BE173377 Out-of-frame Inter-chr p13.1 Oncogene Tumor suppressor gene p34.3 112670 ChimerSeq ChiTaRs ChiTaRs MEGF6-CASP4 MEGF6 chr1 3522252 CASP4 chr11 104814627 Exonic hg19 NA DA572637 Out-of-frame Inter-chr p36.32 q22.3 112671 ChimerSeq ChiTaRs ChiTaRs RGS4-TSPAN9 RGS4 chr1 163045446 TSPAN9 chr12 3320757 Exonic hg19 NA BC000737 Out-of-frame Inter-chr q23.3 p13.33 112672 ChimerSeq ChiTaRs ChiTaRs CD81-PAXBP1 CD81 chr11 2418626 PAXBP1 chr21 34115582 Exonic hg19 NA DB337047 Out-of-frame Inter-chr p15.5 112673 ChimerSeq ChiTaRs ChiTaRs STAU2-STAU2 STAU2 chr8 74648297 STAU2 chr8 74650922 Exonic hg19 NA BQ082467 Out-of-frame Intra-chr q21.11 q21.11 112674 ChimerSeq ChiTaRs ChiTaRs RPS14-WDR6 RPS14 chr5 149823906 WDR6 chr3 49050384 Exonic hg19 NA BM680717 Out-of-frame Inter-chr q33.1 p21.31 112675 ChimerSeq ChiTaRs ChiTaRs BTBD9-BTBD9 BTBD9 chr6 38545428 BTBD9 chr6 38142931 Exonic hg19 NA F13287 Out-of-frame Intra-chr p21.2 p21.2 112676 ChimerSeq ChiTaRs ChiTaRs PAPPA-TNFRSF11A PAPPA chr9 118949730 TNFRSF11A chr18 59998152 Exonic hg19 NA R32087 Out-of-frame Inter-chr q33.1 q21.33 112677 ChimerSeq ChiTaRs ChiTaRs BRK1-SLC2A4RG BRK1 chr3 10168874 SLC2A4RG chr20 62374830 Exonic hg19 NA BC013687 3'UTR-3'UTR Inter-chr p25.3 q13.33 Transcription factor 112678 ChimerSeq ChiTaRs ChiTaRs FUBP3-FUBP3 FUBP3 chr9 133506163 FUBP3 chr9 133470922 Exonic hg19 NA BE929907 Out-of-frame Intra-chr q34.11 q34.11 112679 ChimerSeq ChiTaRs ChiTaRs TSEN2-MIR548G TSEN2 chr3 12556985 MIR548G chr3 99407439 Exonic hg19 NA BF754357 Out-of-frame Intra-chr p25.2 q31.22 112680 ChimerSeq ChiTaRs ChiTaRs SH3BGRL3-APP SH3BGRL3 chr1 26608011 APP chr21 27326946 Exonic hg19 NA CD369777 Out-of-frame Inter-chr p36.11 q21.3 112681 ChimerSeq ChiTaRs ChiTaRs SFTPC-CGN SFTPC chr8 22020159 CGN chr1 151497469 Exonic hg19 NA BF845787 Out-of-frame Inter-chr p21.3 q21.3 112682 ChimerSeq ChiTaRs ChiTaRs MATN2-PLEKHA7 MATN2 chr8 99016007 PLEKHA7 chr11 16815715 Exonic hg19 NA BF832657 Out-of-frame Inter-chr q22.1 p15.1 112683 ChimerSeq ChiTaRs ChiTaRs SAMD9L-ACVR2B SAMD9L chr7 92766155 ACVR2B chr3 38521173 Exonic hg19 NA BE069037 Out-of-frame Inter-chr q21.2 Tumor suppressor gene p22.2 112684 ChimerSeq ChiTaRs ChiTaRs LDLRAD3-LDLRAD3 LDLRAD3 chr11 36091689 LDLRAD3 chr11 36091204 Exonic hg19 NA BF893987 Out-of-frame Intra-chr p13 p13 112685 ChimerSeq ChiTaRs ChiTaRs AGAP1-TRIOBP AGAP1 chr2 236873970 TRIOBP chr22 38158314 Exonic hg19 NA BF815807 Out-of-frame Inter-chr q37.2 q13.1 112686 ChimerSeq ChiTaRs ChiTaRs MGAT5-MGAT5 MGAT5 chr2 135207206 MGAT5 chr2 135206960 Exonic hg19 NA BX647087 Out-of-frame Intra-chr q21.2 q21.2 112687 ChimerSeq ChiTaRs ChiTaRs TAF8-TAF8 TAF8 chr6 42047733 TAF8 chr6 42047824 Exonic hg19 NA AI659647 Out-of-frame Intra-chr p21.1 p21.1 112688 ChimerSeq ChiTaRs ChiTaRs SPRED2-SPRED2 SPRED2 chr2 65628129 SPRED2 chr2 65630135 Exonic hg19 NA AW579707 Out-of-frame Intra-chr p14 p14 112689 ChimerSeq ChiTaRs ChiTaRs C1orf151-NBL1-HMGB2 C1orf151-NBL1 chr1 19984318 HMGB2 chr4 174252917 Exonic hg19 NA BG924337 Out-of-frame Inter-chr q34.1 112690 ChimerSeq ChiTaRs ChiTaRs LOC648987-LOC648987 LOC648987 chr5 43017768 LOC648987 chr5 43014897 Exonic hg19 NA BQ223527 Out-of-frame Intra-chr 112691 ChimerSeq ChiTaRs ChiTaRs TSPAN2-KLF7 TSPAN2 chr1 115592798 KLF7 chr2 207969775 Exonic hg19 NA BF359767 Out-of-frame Inter-chr p13.2 q33.3 Transcription factor 112692 ChimerSeq ChiTaRs ChiTaRs GBF1-GBF1 GBF1 chr10 104120056 GBF1 chr10 104117846 Exonic hg19 NA BQ354177 Out-of-frame Intra-chr q24.32 q24.32 112693 ChimerSeq ChiTaRs ChiTaRs MRPS10-SEC13 MRPS10 chr6 42175596 SEC13 chr3 10343270 Exonic hg19 NA BG256737 Out-of-frame Inter-chr p21.1 p25.3 112694 ChimerSeq ChiTaRs ChiTaRs PSAP-ABCA4 PSAP chr10 73576194 ABCA4 chr1 94492841 Exonic hg19 NA AA019217 Out-of-frame Inter-chr q22.1 p22.1 112695 ChimerSeq ChiTaRs ChiTaRs ITGAV-ITGAV ITGAV chr2 187544944 ITGAV chr2 187544917 Exonic hg19 NA BF981617 Out-of-frame Intra-chr q32.1 Tumor suppressor gene q32.1 Tumor suppressor gene 112696 ChimerSeq ChiTaRs ChiTaRs EIF4E3-FCN3 EIF4E3 chr3 71731514 FCN3 chr1 27695603 Exonic hg19 NA D88587 Out-of-frame Inter-chr p13 p36.11 112697 ChimerSeq ChiTaRs ChiTaRs NCL-NCL NCL chr2 232326383 NCL chr2 232320168 Exonic hg19 NA BQ302417 Out-of-frame Intra-chr q37.1 q37.1 112698 ChimerSeq ChiTaRs ChiTaRs TAX1BP1-TAX1BP1 TAX1BP1 chr7 27868396 TAX1BP1 chr7 27868395 Exonic hg19 NA BM806487 Out-of-frame Intra-chr p15.2 p15.2 112699 ChimerSeq ChiTaRs ChiTaRs RBMS3-ROBO1 RBMS3 chr3 29752236 ROBO1 chr3 78889375 Exonic hg19 NA AA298937 Out-of-frame Intra-chr p24.1 Tumor suppressor gene p12.3 Tumor suppressor gene 112700 ChimerSeq ChiTaRs ChiTaRs COL5A2-VIM COL5A2 chr2 189897790 VIM chr10 17276737 Exonic hg19 NA BG876887 Out-of-frame Inter-chr q32.2 p13 Tumor suppressor gene 112701 ChimerSeq ChiTaRs ChiTaRs CLU-CLU CLU chr8 27468926 CLU chr8 27468663 Exonic hg19 NA BP348657 Out-of-frame Intra-chr p21.1 Tumor suppressor gene p21.1 Tumor suppressor gene 112702 ChimerSeq ChiTaRs ChiTaRs DEK-DEK DEK chr6 18224734 DEK chr6 18224690 Exonic hg19 NA BF034427 Out-of-frame Intra-chr p22.3 Oncogene p22.3 Oncogene 112703 ChimerSeq ChiTaRs ChiTaRs SPARC-AVL9 SPARC chr5 151041961 AVL9 chr7 33020014 Exonic hg19 NA BQ369697 Out-of-frame Inter-chr q33.1 Tumor suppressor gene p14.3 112704 ChimerSeq ChiTaRs ChiTaRs UBE4B-USP40 UBE4B chr1 10123425 USP40 chr2 234396957 Exonic hg19 NA N25507 Out-of-frame Inter-chr p36.22 Tumor suppressor gene q37.1 112705 ChimerSeq ChiTaRs ChiTaRs SORBS2-TNRC6A SORBS2 chr4 186611233 TNRC6A chr16 24828954 Exonic hg19 NA AK025277 Out-of-frame Inter-chr q35.1 p12.1 112706 ChimerSeq ChiTaRs ChiTaRs KDM3A-ADCY1 KDM3A chr2 86719833 ADCY1 chr7 45754806 Exonic hg19 NA BM668617 Out-of-frame Inter-chr p11.2 Tumor suppressor gene p12.3 112707 ChimerSeq ChiTaRs ChiTaRs ZCCHC11-USP15 ZCCHC11 chr1 52998806 USP15 chr12 62710170 Exonic hg19 NA CV416217 Out-of-frame Inter-chr p32.3 q14.1 112708 ChimerSeq ChiTaRs ChiTaRs FAM194A-GNB2L1 FAM194A chr3 150421577 GNB2L1 chr5 180664669 Exonic hg19 NA AI140187 Out-of-frame Inter-chr Tumor suppressor gene 112709 ChimerSeq ChiTaRs ChiTaRs CERS2-CALM1 CERS2 chr1 150937974 CALM1 chr14 90872218 Exonic hg19 NA AW502357 Out-of-frame Inter-chr q21.3 q32.11 112710 ChimerSeq ChiTaRs ChiTaRs SRPK2-SRPK2 SRPK2 chr7 104812783 SRPK2 chr7 104812738 Exonic hg19 NA BF358657 Out-of-frame Intra-chr q22.3 CMGC:SRPK q22.3 CMGC:SRPK 112711 ChimerSeq ChiTaRs ChiTaRs ENPP2-MALAT1 ENPP2 chr8 120620382 MALAT1 chr11 65271001 Exonic hg19 NA AI718737 Out-of-frame Inter-chr q24.12 q13.1 112712 ChimerSeq ChiTaRs ChiTaRs PSMD2-INPP1 PSMD2 chr3 184021806 INPP1 chr2 191236012 Exonic hg19 NA BE720207 Out-of-frame Inter-chr q27.1 q32.2 112713 ChimerSeq ChiTaRs ChiTaRs RPS8-MAP3K7 RPS8 chr1 45244427 MAP3K7 chr6 91246054 Exonic hg19 NA BM682967 Out-of-frame Inter-chr p34.1 q15 STE:STE11 Oncogene 112714 ChimerSeq ChiTaRs ChiTaRs SH3RF3-SH3RF3 SH3RF3 chr2 109873043 SH3RF3 chr2 109876530 Exonic hg19 NA AA179627 Out-of-frame Intra-chr q13 q13 112715 ChimerSeq ChiTaRs ChiTaRs USP40-ARMC8 USP40 chr2 234398073 ARMC8 chr3 137906773 Exonic hg19 NA BX099887 Out-of-frame Inter-chr q37.1 q22.3 112716 ChimerSeq ChiTaRs ChiTaRs DCUN1D1-WWC3 DCUN1D1 chr3 182677833 WWC3 chrX 10107305 Exonic hg19 NA T12477 Out-of-frame Inter-chr q26.33 Oncogene p22.2 112717 ChimerSeq ChiTaRs ChiTaRs SGIP1-CPLX4 SGIP1 chr1 67155297 CPLX4 chr18 56963468 Exonic hg19 NA BQ640597 Out-of-frame Inter-chr p31.3 q21.32 112718 ChimerSeq ChiTaRs ChiTaRs PTCH1-PTCH1 PTCH1 chr9 98208373 PTCH1 chr9 98207582 Exonic hg19 NA BC060667 Out-of-frame Intra-chr q22.32 Oncogene Tumor suppressor gene q22.32 Oncogene Tumor suppressor gene 112719 ChimerSeq ChiTaRs ChiTaRs COX7B-COX7B COX7B chrX 77160880 COX7B chrX 77155023 Exonic hg19 NA CA944777 Out-of-frame Intra-chr q21.1 q21.1 112720 ChimerSeq ChiTaRs ChiTaRs VARS-TOP1MT VARS chr6 3081180 TOP1MT chr8 144408436 Exonic hg19 NA BU147307 Out-of-frame Inter-chr q24.3 112721 ChimerSeq ChiTaRs ChiTaRs KIAA1432-TACC2 KIAA1432 chr9 5670012 TACC2 chr10 124013811 Exonic hg19 NA BF810957 Out-of-frame Inter-chr q26.13 112722 ChimerSeq ChiTaRs ChiTaRs SEMA3A-USP47 SEMA3A chr7 83703196 USP47 chr11 11977859 Exonic hg19 NA BQ012805 Out-of-frame Inter-chr q21.11 p15.3 112723 ChimerSeq ChiTaRs ChiTaRs PTPN12-CKAP5 PTPN12 chr7 77200456 CKAP5 chr11 46765654 Exonic hg19 NA BE466787 Out-of-frame Inter-chr q11.23 Tumor suppressor gene p11.2 112724 ChimerSeq ChiTaRs ChiTaRs RREB1-TCF12 RREB1 chr6 7213115 TCF12 chr15 57282442 Exonic hg19 NA BE072437 Out-of-frame Inter-chr p24.3 Transcription factor q21.3 Oncogene Transcription factor 112725 ChimerSeq ChiTaRs ChiTaRs CAMK2D-CAMK2D CAMK2D chr4 114374434 CAMK2D chr4 114373560 Exonic hg19 NA AI810957 Out-of-frame Intra-chr q26 q26 112726 ChimerSeq ChiTaRs ChiTaRs UTY-OTUD7A UTY chrY 15359375 OTUD7A chr15 32005551 Exonic hg19 NA AI379977 Out-of-frame Inter-chr q11.221 q13.3 112727 ChimerSeq ChiTaRs ChiTaRs C1orf192-HBG2 C1orf192 chr1 161337664 HBG2 chr11 5535634 Exonic hg19 NA AK127987 5'UTR-5'UTR Inter-chr p15.4 112728 ChimerSeq ChiTaRs ChiTaRs PSMB2-SLC25A35 PSMB2 chr1 36068140 SLC25A35 chr17 8193447 Exonic hg19 NA CB156087 Out-of-frame Inter-chr p34.3 p13.1 112729 ChimerSeq ChiTaRs ChiTaRs DOCK11-DOCK11 DOCK11 chrX 117711515 DOCK11 chrX 117710824 Exonic hg19 NA BI740297 Out-of-frame Intra-chr q24 q24 112730 ChimerSeq ChiTaRs ChiTaRs H2AFV-RARA H2AFV chr7 44887598 RARA chr17 38506148 Exonic hg19 NA BE794377 Out-of-frame Inter-chr p13 q21.2 Oncogene Transcription factor 112731 ChimerSeq ChiTaRs ChiTaRs PPM1K-PFN3 PPM1K chr4 89205795 PFN3 chr5 176827357 Exonic hg19 NA BX279877 Out-of-frame Inter-chr q22.1 q35.3 112732 ChimerSeq ChiTaRs ChiTaRs GPM6A-HPX GPM6A chr4 176751570 HPX chr11 6452279 Exonic hg19 NA AV688767 Out-of-frame Inter-chr q34.2 p15.4 112733 ChimerSeq ChiTaRs ChiTaRs FKBP5-FKBP5 FKBP5 chr6 35541902 FKBP5 chr6 35541367 Exonic hg19 NA CA418117 Out-of-frame Intra-chr p21.31 p21.31 112734 ChimerSeq ChiTaRs ChiTaRs ATP10B-ATP6AP1 ATP10B chr5 160028430 ATP6AP1 chrX 153664437 Exonic hg19 NA AL121297 Out-of-frame Inter-chr q34 q28 112735 ChimerSeq ChiTaRs ChiTaRs RPS4Y1-ARGLU1 RPS4Y1 chrY 2733176 ARGLU1 chr13 107220075 Exonic hg19 NA BI047537 Out-of-frame Inter-chr p11.2 q33.3 112736 ChimerSeq ChiTaRs ChiTaRs VPRBP-VPRBP VPRBP chr3 51435897 VPRBP chr3 51435894 Exonic hg19 NA AI688237 Out-of-frame Intra-chr 112737 ChimerSeq ChiTaRs ChiTaRs NEK1-APPL1 NEK1 chr4 170446822 APPL1 chr3 57306892 Exonic hg19 NA N56837 Out-of-frame Inter-chr q33 Other:NEK p14.3 112738 ChimerSeq ChiTaRs ChiTaRs ADAM12-NUMA1 ADAM12 chr10 127737935 NUMA1 chr11 71730543 Exonic hg19 NA BF996597 Out-of-frame Inter-chr q26.2 q13.4 Oncogene 112739 ChimerSeq ChiTaRs ChiTaRs OFCC1-OFCC1 OFCC1 chr6 9908839 OFCC1 chr6 9842165 Exonic hg19 NA AF548117 Out-of-frame Intra-chr p24.3 p24.3 112740 ChimerSeq ChiTaRs ChiTaRs ARID1B-NCL ARID1B chr6 157135244 NCL chr2 232320751 Exonic hg19 NA BE935207 Out-of-frame Inter-chr q25.3 Oncogene q37.1 112741 ChimerSeq ChiTaRs ChiTaRs PRRC2A-SHISA5 PRRC2A chr6 2985236 SHISA5 chr3 48509887 Exonic hg19 NA CD365317 Out-of-frame Inter-chr p21.31 112742 ChimerSeq ChiTaRs ChiTaRs PSD4-PSD4 PSD4 chr2 113954652 PSD4 chr2 113954817 Exonic hg19 NA AW176277 Out-of-frame Intra-chr q14.1 q14.1 112743 ChimerSeq ChiTaRs ChiTaRs ASXL2-ASXL2 ASXL2 chr2 25988945 ASXL2 chr2 25988888 Exonic hg19 NA AA586527 Out-of-frame Intra-chr p23.3 p23.3 112744 ChimerSeq ChiTaRs ChiTaRs ZNF438-ZNF438 ZNF438 chr10 31230582 ZNF438 chr10 31165927 Exonic hg19 NA AW893507 Out-of-frame Intra-chr p11.23 Transcription factor p11.23 Transcription factor 112745 ChimerSeq ChiTaRs ChiTaRs GSK3B-GSK3B GSK3B chr3 119582283 GSK3B chr3 119562169 Exonic hg19 NA AA678627 Out-of-frame Intra-chr q13.33 CMGC:GSK Tumor suppressor gene q13.33 CMGC:GSK Tumor suppressor gene 112746 ChimerSeq ChiTaRs ChiTaRs STK17A-STK17A STK17A chr7 43664803 STK17A chr7 43664608 Exonic hg19 NA AW804357 Out-of-frame Intra-chr p13 p13 112747 ChimerSeq ChiTaRs ChiTaRs ANKRD28-ATXN3 ANKRD28 chr3 15797906 ATXN3 chr14 92530428 Exonic hg19 NA AW002937 Out-of-frame Inter-chr p25.1 q32.12 112748 ChimerSeq ChiTaRs ChiTaRs WWP1-WWP1 WWP1 chr8 87377109 WWP1 chr8 87378267 Exonic hg19 NA DB311657 Out-of-frame Intra-chr q21.3 q21.3 112749 ChimerSeq ChiTaRs ChiTaRs RPL7A-CDH1 RPL7A chr9 136218282 CDH1 chr16 68846067 Exonic hg19 NA BU681467 Out-of-frame Inter-chr q22.1 Oncogene Tumor suppressor gene 112750 ChimerSeq ChiTaRs ChiTaRs CAMK4-SPATA22 CAMK4 chr5 110615033 SPATA22 chr17 3414247 Exonic hg19 NA AW899117 Out-of-frame Inter-chr q22.1 p13.2 112751 ChimerSeq ChiTaRs ChiTaRs PDHX-THRAP3 PDHX chr11 34988086 THRAP3 chr1 36725472 Exonic hg19 NA AK024187 Out-of-frame Inter-chr p13 p34.3 112752 ChimerSeq ChiTaRs ChiTaRs MOGS-MALAT1 MOGS chr2 74689528 MALAT1 chr11 65271740 Exonic hg19 NA BF803127 Out-of-frame Inter-chr p13.1 q13.1 112753 ChimerSeq ChiTaRs ChiTaRs ANKRD37-ANKRD37 ANKRD37 chr4 186321395 ANKRD37 chr4 186320777 Exonic hg19 NA BU689807 Out-of-frame Intra-chr q35.1 q35.1 112754 ChimerSeq ChiTaRs ChiTaRs RPS6KC1-PAX8 RPS6KC1 chr1 213300126 PAX8 chr2 113996932 Exonic hg19 NA DN917747 Out-of-frame Inter-chr q32.3 q14.1 Oncogene Transcription factor 112755 ChimerSeq ChiTaRs ChiTaRs IL8-ARNT2 IL8 chr4 74607738 ARNT2 chr15 80887373 Exonic hg19 NA AF043337 Out-of-frame Inter-chr q25.1 Transcription factor 112756 ChimerSeq ChiTaRs ChiTaRs UTRN-TMEM232 UTRN chr6 144876021 TMEM232 chr5 110036315 Exonic hg19 NA BF750097 Out-of-frame Inter-chr q24.2 q22.1 112757 ChimerSeq ChiTaRs ChiTaRs USP40-USP40 USP40 chr2 234385315 USP40 chr2 234385438 Exonic hg19 NA BG326507 Out-of-frame Intra-chr q37.1 q37.1 112758 ChimerSeq ChiTaRs ChiTaRs COL1A2-COL1A2 COL1A2 chr7 94060097 COL1A2 chr7 94060125 Exonic hg19 NA AW020607 Out-of-frame Intra-chr q21.3 q21.3 112759 ChimerSeq ChiTaRs ChiTaRs PROS1-GLUL PROS1 chr3 93678963 GLUL chr1 182353484 Exonic hg19 NA AW579277 Out-of-frame Inter-chr q11.1 q25.3 112760 ChimerSeq ChiTaRs ChiTaRs ARID5B-ARID5B ARID5B chr10 63856700 ARID5B chr10 63856380 Exonic hg19 NA AW337747 Out-of-frame Intra-chr q21.2 Transcription factor q21.2 Transcription factor 112761 ChimerSeq ChiTaRs ChiTaRs TRIM5-CDC27 TRIM5 chr11 5730976 CDC27 chr17 45232068 Exonic hg19 NA BF922027 Out-of-frame Inter-chr p15.4 q21.32 112762 ChimerSeq ChiTaRs ChiTaRs RMND5A-MALAT1 RMND5A chr2 87004924 MALAT1 chr11 65267861 Exonic hg19 NA W32517 Out-of-frame Inter-chr p11.2 q13.1 112763 ChimerSeq ChiTaRs ChiTaRs DPYSL2-SPIN1 DPYSL2 chr8 26515412 SPIN1 chr9 91092895 Exonic hg19 NA AW889897 Out-of-frame Inter-chr p21.2 q22.1 112764 ChimerSeq ChiTaRs ChiTaRs SLC25A4-POGZ SLC25A4 chr4 186068790 POGZ chr1 151418819 Exonic hg19 NA N45527 Out-of-frame Inter-chr q35.1 q21.3 112765 ChimerSeq ChiTaRs ChiTaRs MIR548A3-TMEM163 MIR548A3 chr3 103927217 TMEM163 chr2 135308141 Exonic hg19 NA BE795957 Out-of-frame Inter-chr q22.3 q21.3 112766 ChimerSeq ChiTaRs ChiTaRs C1QA-C1QA C1QA chr1 22966101 C1QA chr1 22965831 Exonic hg19 NA BU727057 Out-of-frame Intra-chr p36.12 p36.12 112767 ChimerSeq ChiTaRs ChiTaRs SRP9-WAPAL SRP9 chr1 225973961 WAPAL chr10 88277350 Exonic hg19 NA BE698267 Out-of-frame Inter-chr q42.12 112768 ChimerSeq ChiTaRs ChiTaRs SLC3A2-SLC3A2 SLC3A2 chr11 62656079 SLC3A2 chr11 62655606 Exonic hg19 NA BG471247 Out-of-frame Intra-chr q12.3 q12.3 112769 ChimerSeq ChiTaRs ChiTaRs ACER2-CSH1 ACER2 chr9 19451624 CSH1 chr17 61972278 Exonic hg19 NA BC092487 Out-of-frame Inter-chr p22.1 q23.3 112770 ChimerSeq ChiTaRs ChiTaRs PCLO-OPN1LW PCLO chr7 82450481 OPN1LW chrX 153424466 Exonic hg19 NA BM929847 Out-of-frame Inter-chr q21.11 q28 112771 ChimerSeq ChiTaRs ChiTaRs SERINC2-ARHGAP1 SERINC2 chr1 31892388 ARHGAP1 chr11 46698693 Exonic hg19 NA BM729027 Out-of-frame Inter-chr p35.2 p11.2 112772 ChimerSeq ChiTaRs ChiTaRs CTNND1-CTNND1 CTNND1 chr11 57550469 CTNND1 chr11 57545005 Exonic hg19 NA AW992887 Out-of-frame Intra-chr q12.1 Tumor suppressor gene q12.1 Tumor suppressor gene 112773 ChimerSeq ChiTaRs ChiTaRs UCK2-UCK2 UCK2 chr1 165820657 UCK2 chr1 165827684 Exonic hg19 NA BF366807 Out-of-frame Intra-chr q24.1 q24.1 112774 ChimerSeq ChiTaRs ChiTaRs USP11-USP11 USP11 chrX 47099245 USP11 chrX 47101478 Exonic hg19 NA AW849407 Out-of-frame Intra-chr p11.3 p11.3 112775 ChimerSeq ChiTaRs ChiTaRs SASH3-ALB SASH3 chrX 128929147 ALB chr4 74270004 Exonic hg19 NA AI133207 Out-of-frame Inter-chr q26.1 q13.3 112776 ChimerSeq ChiTaRs ChiTaRs GAS5-HADHA GAS5 chr1 173834423 HADHA chr2 26462649 Exonic hg19 NA BF804747 Out-of-frame Inter-chr q25.1 Tumor suppressor gene p23.3 112777 ChimerSeq ChiTaRs ChiTaRs VCP-LGALS3BP VCP chr9 35057394 LGALS3BP chr17 76968750 Exonic hg19 NA BI041997 Out-of-frame Inter-chr p13.3 q25.3 112778 ChimerSeq ChiTaRs ChiTaRs CTSO-CTSO CTSO chr4 156846742 CTSO chr4 156846432 Exonic hg19 NA H24177 Out-of-frame Intra-chr q32.1 q32.1 112779 ChimerSeq ChiTaRs ChiTaRs AKNAD1-ABAT AKNAD1 chr1 109465171 ABAT chr16 8839711 Exonic hg19 NA BF923967 Out-of-frame Inter-chr p13.3 p13.2 112780 ChimerSeq ChiTaRs ChiTaRs PAG1-STYX PAG1 chr8 81882736 STYX chr14 53240340 Exonic hg19 NA BF691397 Out-of-frame Inter-chr q21.13 q22.1 112781 ChimerSeq ChiTaRs ChiTaRs RNF19B-C4orf40 RNF19B chr1 33417888 C4orf40 chr4 71023831 Exonic hg19 NA AI886777 Out-of-frame Inter-chr p35.1 112782 ChimerSeq ChiTaRs ChiTaRs MAML3-SERPINE2 MAML3 chr4 140811710 SERPINE2 chr2 224839994 Exonic hg19 NA U80747 Out-of-frame Inter-chr q31.1 q36.1 112783 ChimerSeq ChiTaRs ChiTaRs ARSD-SLC25A33 ARSD chrX 2823147 SLC25A33 chr1 9630123 Exonic hg19 NA BE939757 Out-of-frame Inter-chr p22.33 p36.22 112784 ChimerSeq ChiTaRs ChiTaRs PROSC-PROSC PROSC chr8 37635788 PROSC chr8 37635770 Exonic hg19 NA AA720757 Out-of-frame Intra-chr 112785 ChimerSeq ChiTaRs ChiTaRs DEPTOR-DEPTOR DEPTOR chr8 121050216 DEPTOR chr8 121048080 Exonic hg19 NA AU122377 Out-of-frame Intra-chr q24.12 q24.12 112786 ChimerSeq ChiTaRs ChiTaRs LOC389906-HHIP LOC389906 chrX 3747084 HHIP chr4 145567302 Exonic hg19 NA AY358747 Out-of-frame Inter-chr q31.21 112787 ChimerSeq ChiTaRs ChiTaRs PTPRK-PTPRK PTPRK chr6 128291212 PTPRK chr6 128291150 Exonic hg19 NA AW892887 Out-of-frame Intra-chr Tumor suppressor gene Tumor suppressor gene 112788 ChimerSeq ChiTaRs ChiTaRs ART3-KCTD8 ART3 chr4 76942420 KCTD8 chr4 44256891 Exonic hg19 NA AI918477 Out-of-frame Intra-chr q21.1 p13 112789 ChimerSeq ChiTaRs ChiTaRs CTTNBP2NL-BCL9L CTTNBP2NL chr1 112999857 BCL9L chr11 118779577 Exonic hg19 NA BF823097 Out-of-frame Inter-chr p13.2 q23.3 112790 ChimerSeq ChiTaRs ChiTaRs ENOX2-TXN2 ENOX2 chrX 130029520 TXN2 chr22 36863093 Exonic hg19 NA AK130187 Out-of-frame Inter-chr q26.1 q12.3 112791 ChimerSeq ChiTaRs ChiTaRs DENND4B-DHCR7 DENND4B chr1 153915466 DHCR7 chr11 71146005 Exonic hg19 NA BI038607 Out-of-frame Inter-chr q21.3 q13.4 112792 ChimerSeq ChiTaRs ChiTaRs DGKG-PCDH9 DGKG chr3 185997040 PCDH9 chr13 67661420 Exonic hg19 NA BF921517 Out-of-frame Inter-chr q27.3 q21.32 Tumor suppressor gene 112793 ChimerSeq ChiTaRs ChiTaRs CKAP2L-NT5DC4 CKAP2L chr2 113504110 NT5DC4 chr2 113498541 Exonic hg19 NA BI032097 Out-of-frame Intra-chr q14.1 q14.1 112794 ChimerSeq ChiTaRs ChiTaRs GBP2-ETS2 GBP2 chr1 89573851 ETS2 chr21 40194808 Exonic hg19 NA AI280597 Out-of-frame Inter-chr p22.2 q22.2 Tumor suppressor gene Transcription factor 112795 ChimerSeq ChiTaRs ChiTaRs ADCY2-RBM39 ADCY2 chr1 152005066 RBM39 chr20 34327092 Exonic hg19 NA AI807187 Out-of-frame Inter-chr p15.31 q11.22 112796 ChimerSeq ChiTaRs ChiTaRs LRRFIP1-LRRFIP1 LRRFIP1 chr2 238672135 LRRFIP1 chr2 238672254 Exonic hg19 NA CA944747 Out-of-frame Intra-chr q37.3 q37.3 112797 ChimerSeq ChiTaRs ChiTaRs C4orf19-C4orf19 C4orf19 chr4 37590521 C4orf19 chr4 37592221 Exonic hg19 NA BG011027 In-Frame Intra-chr p14 p14 112798 ChimerSeq ChiTaRs ChiTaRs NEXN-NEXN NEXN chr1 78399146 NEXN chr1 78395048 Exonic hg19 NA CD299407 Out-of-frame Intra-chr p31.1 p31.1 112799 ChimerSeq ChiTaRs ChiTaRs CD46-CD46 CD46 chr1 207940640 CD46 chr1 207940649 Exonic hg19 NA CN312837 Out-of-frame Intra-chr q32.2 q32.2 112800 ChimerSeq ChiTaRs ChiTaRs GRHPR-LCLAT1 GRHPR chr9 37436987 LCLAT1 chr2 30670954 Exonic hg19 NA AI924257 Out-of-frame Inter-chr p13.2 p23.1 112801 ChimerSeq ChiTaRs ChiTaRs KDM5C-C1QBP KDM5C chrX 53221850 C1QBP chr17 5336451 Exonic hg19 NA BQ323647 Out-of-frame Inter-chr p11.22 Oncogene p13.2 112802 ChimerSeq ChiTaRs ChiTaRs GORASP2-LDHA GORASP2 chr2 171807914 LDHA chr11 18416110 Exonic hg19 NA BF893167 Out-of-frame Inter-chr q31.1 p15.1 112803 ChimerSeq ChiTaRs ChiTaRs USP48-USP48 USP48 chr1 22054681 USP48 chr1 22054347 Exonic hg19 NA AA513047 Out-of-frame Intra-chr p36.12 p36.12 112804 ChimerSeq ChiTaRs ChiTaRs LARP7-SPRED1 LARP7 chr4 113559176 SPRED1 chr15 38647422 Exonic hg19 NA BG283247 Out-of-frame Inter-chr q25 q14 112805 ChimerSeq ChiTaRs ChiTaRs SZT2-ATP5L SZT2 chr1 43917901 ATP5L chr11 118279817 Exonic hg19 NA AV727827 Out-of-frame Inter-chr p34.2 q23.3 112806 ChimerSeq ChiTaRs ChiTaRs DDX21-SPATS2L DDX21 chr10 70744401 SPATS2L chr2 201342898 Exonic hg19 NA BP429447 Out-of-frame Inter-chr q22.1 q33.1 112807 ChimerSeq ChiTaRs ChiTaRs HNRNPH1-SAP130 HNRNPH1 chr5 179050671 SAP130 chr2 128757629 Exonic hg19 NA DA533817 5'UTR-CDS Inter-chr q35.3 q14.3 112808 ChimerSeq ChiTaRs ChiTaRs NKX6-3-NKX6-3 NKX6-3 chr8 41515553 NKX6-3 chr8 41518676 Exonic hg19 NA BX107897 Out-of-frame Intra-chr p11.21 p11.21 112809 ChimerSeq ChiTaRs ChiTaRs COL6A3-POSTN COL6A3 chr2 238233218 POSTN chr13 38152985 Exonic hg19 NA BE160877 Out-of-frame Inter-chr q37.3 q13.3 112810 ChimerSeq ChiTaRs ChiTaRs PVT1-COL6A1 PVT1 chr8 128943398 COL6A1 chr21 47424394 Exonic hg19 NA AK128687 Out-of-frame Inter-chr q24.21 q22.3 112811 ChimerSeq ChiTaRs ChiTaRs RNF149-RNF149 RNF149 chr2 101890291 RNF149 chr2 101888102 Exonic hg19 NA R08617 Out-of-frame Intra-chr q11.2 q11.2 112812 ChimerSeq ChiTaRs ChiTaRs CDK14-MALAT1 CDK14 chr7 90736206 MALAT1 chr11 65266554 Exonic hg19 NA BQ694317 Out-of-frame Inter-chr q21.13 q13.1 112813 ChimerSeq ChiTaRs ChiTaRs TRIP12-TRIP12 TRIP12 chr2 230638556 TRIP12 chr2 230658602 Exonic hg19 NA CR741687 Out-of-frame Intra-chr q36.3 q36.3 112814 ChimerSeq ChiTaRs ChiTaRs HCRTR1-CYB5R1 HCRTR1 chr1 32096404 CYB5R1 chr1 202931665 Exonic hg19 NA AA368017 Out-of-frame Intra-chr p35.2 q32.1 112815 ChimerSeq ChiTaRs ChiTaRs RHO-RHO RHO chr3 129247727 RHO chr3 129251506 Exonic hg19 NA W28977 Out-of-frame Intra-chr q22.1 q22.1 112816 ChimerSeq ChiTaRs ChiTaRs HSPB1-HSPB1 HSPB1 chr7 75933611 HSPB1 chr7 75933328 Exonic hg19 NA AI609727 Out-of-frame Intra-chr q11.23 q11.23 112817 ChimerSeq ChiTaRs ChiTaRs KIN-KIN KIN chr10 7822829 KIN chr10 7827398 Exonic hg19 NA BE011287 Out-of-frame Intra-chr p14 Transcription factor p14 Transcription factor 112818 ChimerSeq ChiTaRs ChiTaRs TMEM177-ERBB2 TMEM177 chr2 120473042 ERBB2 chr17 37866100 Exonic hg19 NA BF229957 Out-of-frame Inter-chr q14.2 q12 Oncogene 112819 ChimerSeq ChiTaRs ChiTaRs SYDE2-SYDE2 SYDE2 chr1 85648378 SYDE2 chr1 85648410 Exonic hg19 NA AK023877 Out-of-frame Intra-chr p22.3 p22.3 112820 ChimerSeq ChiTaRs ChiTaRs CMTM6-CMTM6 CMTM6 chr3 32524755 CMTM6 chr3 32524732 Exonic hg19 NA BM979367 Out-of-frame Intra-chr p22.3 p22.3 112821 ChimerSeq ChiTaRs ChiTaRs ARID4B-ARID4B ARID4B chr1 235345855 ARID4B chr1 235345879 Exonic hg19 NA AA112197 Out-of-frame Intra-chr q42.3 q42.3 112822 ChimerSeq ChiTaRs ChiTaRs DHCR24-B4GALT5 DHCR24 chr1 55317035 B4GALT5 chr20 48252183 Exonic hg19 NA AI207637 Out-of-frame Inter-chr p32.3 q13.13 112823 ChimerSeq ChiTaRs ChiTaRs PRPF40A-PRPF40A PRPF40A chr2 153515829 PRPF40A chr2 153515825 Exonic hg19 NA BQ318887 Out-of-frame Intra-chr q23.3 q23.3 112824 ChimerSeq ChiTaRs ChiTaRs YWHAQ-ENPP3 YWHAQ chr2 9725406 ENPP3 chr6 132062737 Exonic hg19 NA BF361277 Out-of-frame Inter-chr p25.1 q23.2 112825 ChimerSeq ChiTaRs ChiTaRs SNHG1-FEZ1 SNHG1 chr11 62622548 FEZ1 chr11 125359471 Exonic hg19 NA DA789547 Out-of-frame Intra-chr q12.3 q24.2 Tumor suppressor gene 112826 ChimerSeq ChiTaRs ChiTaRs SRPK1-TJP2 SRPK1 chr6 35811658 TJP2 chr9 71865303 Exonic hg19 NA BF381297 Out-of-frame Inter-chr p21.31 CMGC:SRPK q21.11 112827 ChimerSeq ChiTaRs ChiTaRs ST8SIA6-ST8SIA6 ST8SIA6 chr10 17390449 ST8SIA6 chr10 17383988 Exonic hg19 NA AI954707 Out-of-frame Intra-chr p12.33 p12.33 112828 ChimerSeq ChiTaRs ChiTaRs HGSNAT-HGSNAT HGSNAT chr8 43002705 HGSNAT chr8 42995695 Exonic hg19 NA CN256927 Out-of-frame Intra-chr p11.21 p11.21 112829 ChimerSeq ChiTaRs ChiTaRs MICB-NFE2L1 MICB chr6 2667875 NFE2L1 chr17 46136073 Exonic hg19 NA BF762977 Out-of-frame Inter-chr q21.32 Transcription factor 112830 ChimerSeq ChiTaRs ChiTaRs ANXA7-ANXA7 ANXA7 chr10 75138766 ANXA7 chr10 75148090 Exonic hg19 NA AW363257 Out-of-frame Intra-chr q22.2 Tumor suppressor gene q22.2 Tumor suppressor gene 112831 ChimerSeq ChiTaRs ChiTaRs ASIC3-ASIC3 ASIC3 chr7 150747842 ASIC3 chr7 150745979 Exonic hg19 NA AA429417 Out-of-frame Intra-chr q36.1 q36.1 112832 ChimerSeq ChiTaRs ChiTaRs KCNQ1-UCP2 KCNQ1 chr11 2488318 UCP2 chr11 73685716 Exonic hg19 NA AK226077 Out-of-frame Intra-chr p15.5 q13.4 112833 ChimerSeq ChiTaRs ChiTaRs AHCYL1-AHCYL1 AHCYL1 chr1 110566364 AHCYL1 chr1 110564873 Exonic hg19 NA BQ774807 3'UTR-3'UTR Intra-chr p13.3 Tumor suppressor gene p13.3 Tumor suppressor gene 112834 ChimerSeq ChiTaRs ChiTaRs ELOVL7-DSE ELOVL7 chr5 60128856 DSE chr6 116599271 Exonic hg19 NA BQ340167 Out-of-frame Inter-chr q12.1 q22.1 112835 ChimerSeq ChiTaRs ChiTaRs GALNT13-USP34 GALNT13 chr2 155154839 USP34 chr2 61479516 Exonic hg19 NA Z97017 Out-of-frame Intra-chr q23.3 p15 112836 ChimerSeq ChiTaRs ChiTaRs FLNB-MECP2 FLNB chr3 58095377 MECP2 chrX 153348636 Exonic hg19 NA BF089107 Out-of-frame Inter-chr p14.3 q28 Transcription factor 112837 ChimerSeq ChiTaRs ChiTaRs SPRY1-SPRY1 SPRY1 chr4 124324749 SPRY1 chr4 124324709 Exonic hg19 NA AA747227 Out-of-frame Intra-chr q28.1 q28.1 112838 ChimerSeq ChiTaRs ChiTaRs SYNPO2-SYNPO2 SYNPO2 chr4 119968737 SYNPO2 chr4 119954055 Exonic hg19 NA AU117257 Out-of-frame Intra-chr q26 Tumor suppressor gene q26 Tumor suppressor gene 112839 ChimerSeq ChiTaRs ChiTaRs HSPA4-HSPA4 HSPA4 chr5 132431932 HSPA4 chr5 132432883 Exonic hg19 NA AW819997 Out-of-frame Intra-chr q31.1 q31.1 112840 ChimerSeq ChiTaRs ChiTaRs ATOX1-MAP7D3 ATOX1 chr5 151122445 MAP7D3 chrX 135300405 Exonic hg19 NA BC028177 Out-of-frame Inter-chr q33.1 q26.3 112841 ChimerSeq ChiTaRs ChiTaRs NR3C1-NR3C1 NR3C1 chr5 142657974 NR3C1 chr5 142657499 Exonic hg19 NA BQ433097 Out-of-frame Intra-chr q31.3 Transcription factor q31.3 Transcription factor 112842 ChimerSeq ChiTaRs ChiTaRs HLA-DMA-DBT HLA-DMA chr6 32918685 DBT chr1 100661530 Exonic hg19 NA BE832547 Out-of-frame Inter-chr p21.2 112843 ChimerSeq ChiTaRs ChiTaRs SH3BGRL3-NOP16 SH3BGRL3 chr1 26607963 NOP16 chr5 175815444 Exonic hg19 NA BG744907 Out-of-frame Inter-chr p36.11 q35.2 112844 ChimerSeq ChiTaRs ChiTaRs GATS-C7orf25 GATS chr7 99818799 C7orf25 chr7 42957010 Exonic hg19 NA AK225627 Out-of-frame Intra-chr q22.1 p14.1 112845 ChimerSeq ChiTaRs ChiTaRs MRPL14-MRPL14 MRPL14 chr6 44081649 MRPL14 chr6 44084278 Exonic hg19 NA AA427757 Out-of-frame Intra-chr p21.1 p21.1 112846 ChimerSeq ChiTaRs ChiTaRs MED12L-MED12L MED12L chr3 151012293 MED12L chr3 151012331 Exonic hg19 NA CA312497 Out-of-frame Intra-chr q25.1 q25.1 112847 ChimerSeq ChiTaRs ChiTaRs ANK2-ANK2 ANK2 chr4 114273906 ANK2 chr4 114276474 Exonic hg19 NA AA782337 Out-of-frame Intra-chr q25 q25 112848 ChimerSeq ChiTaRs ChiTaRs ELN-CAPG ELN chr7 73484008 CAPG chr2 85621995 Exonic hg19 NA AI424857 Out-of-frame Inter-chr q11.23 p11.2 Tumor suppressor gene 112849 ChimerSeq ChiTaRs ChiTaRs SYN1-RDH14 SYN1 chrX 47446186 RDH14 chr2 18736702 Exonic hg19 NA AW965197 Out-of-frame Inter-chr p11.23 p24.2 112850 ChimerSeq ChiTaRs ChiTaRs TSTD2-KRT4 TSTD2 chr9 100368571 KRT4 chr12 53207455 Exonic hg19 NA DA442077 Out-of-frame Inter-chr q22.33 q13.13 112851 ChimerSeq ChiTaRs ChiTaRs CAPN2-CAPN2 CAPN2 chr1 223945318 CAPN2 chr1 223940607 Exonic hg19 NA BF880017 Out-of-frame Intra-chr q41 q41 112852 ChimerSeq ChiTaRs ChiTaRs ABCA13-ABCA13 ABCA13 chr7 48399373 ABCA13 chr7 48398936 Exonic hg19 NA BF898207 Out-of-frame Intra-chr p12.3 p12.3 112853 ChimerSeq ChiTaRs ChiTaRs STOM-STOM STOM chr9 124103238 STOM chr9 124102947 Exonic hg19 NA CN415527 Out-of-frame Intra-chr q33.2 q33.2 112854 ChimerSeq ChiTaRs ChiTaRs SKIV2L-SKIV2L SKIV2L chr6 3268909 SKIV2L chr6 3269170 Exonic hg19 NA CK724897 Out-of-frame Intra-chr 112855 ChimerSeq ChiTaRs ChiTaRs MAP7-MAP7 MAP7 chr6 136871551 MAP7 chr6 136732756 Exonic hg19 NA AA368787 Out-of-frame Intra-chr q23.3 q23.3 112856 ChimerSeq ChiTaRs ChiTaRs IFITM2-HLA-A IFITM2 chr11 309295 HLA-A chr6 1424585 Exonic hg19 NA BF852037 Out-of-frame Inter-chr p15.5 p22.1 112857 ChimerSeq ChiTaRs ChiTaRs DIP2C-INADL DIP2C chr10 323727 INADL chr1 62574153 Exonic hg19 NA AW860307 Out-of-frame Inter-chr p15.3 112858 ChimerSeq ChiTaRs ChiTaRs HDLBP-HDLBP HDLBP chr2 242187749 HDLBP chr2 242194478 Exonic hg19 NA BI050287 Out-of-frame Intra-chr q37.3 q37.3 112859 ChimerSeq ChiTaRs ChiTaRs RBM27-RBM27 RBM27 chr5 145668379 RBM27 chr5 145668376 Exonic hg19 NA BU167877 Out-of-frame Intra-chr q32 q32 112860 ChimerSeq ChiTaRs ChiTaRs EIF3B-EIF3B EIF3B chr7 2419075 EIF3B chr7 2409262 Exonic hg19 NA AW368037 Out-of-frame Intra-chr p22.3 p22.3 112861 ChimerSeq ChiTaRs ChiTaRs MOB2-MOB2 MOB2 chr11 1754986 MOB2 chr11 1756382 Exonic hg19 NA BM922757 Out-of-frame Intra-chr p15.5 p15.5 112862 ChimerSeq ChiTaRs ChiTaRs E2F5-E2F5 E2F5 chr8 86126656 E2F5 chr8 86126200 Exonic hg19 NA BE828067 Out-of-frame Intra-chr q21.2 Transcription factor q21.2 Transcription factor 112863 ChimerSeq ChiTaRs ChiTaRs ACTR1B-HLA-B ACTR1B chr2 98272524 HLA-B chr6 2655411 Exonic hg19 NA BU679127 Out-of-frame Inter-chr q11.2 112864 ChimerSeq ChiTaRs ChiTaRs LIMCH1-ILF3 LIMCH1 chr4 41630436 ILF3 chr19 10802664 Exonic hg19 NA AW268677 Out-of-frame Inter-chr p13 p13.2 112865 ChimerSeq ChiTaRs ChiTaRs KAT6A-CREBBP KAT6A chr8 41793848 CREBBP chr16 3907401 Exonic hg19 NA AY442917 Out-of-frame Inter-chr p11.21 Oncogene p13.3 Oncogene Tumor suppressor gene KB Pub Seq+ 112866 ChimerSeq ChiTaRs ChiTaRs HTRA1-KIAA0040 HTRA1 chr10 124274423 KIAA0040 chr1 175127166 Exonic hg19 NA BQ183447 Out-of-frame Inter-chr q26.13 Tumor suppressor gene q25.1 112867 ChimerSeq ChiTaRs ChiTaRs HNRNPH3-EPHX1 HNRNPH3 chr10 70102028 EPHX1 chr1 226033214 Exonic hg19 NA BF513447 Out-of-frame Inter-chr q21.3 q42.12 112868 ChimerSeq ChiTaRs ChiTaRs RGS12-RGS12 RGS12 chr4 3424216 RGS12 chr4 3429488 Exonic hg19 NA BE550447 Out-of-frame Intra-chr p16.3 p16.3 112869 ChimerSeq ChiTaRs ChiTaRs HNRNPAB-ATF5 HNRNPAB chr5 177632876 ATF5 chr19 50436927 Exonic hg19 NA BF000687 Out-of-frame Inter-chr q35.3 q13.33 Transcription factor 112870 ChimerSeq ChiTaRs ChiTaRs AKR1B1-PPP1R21 AKR1B1 chr7 134127339 PPP1R21 chr2 48718191 Exonic hg19 NA AI654627 Out-of-frame Inter-chr q33 Tumor suppressor gene p16.3 112871 ChimerSeq ChiTaRs ChiTaRs FBXL18-CHRM3 FBXL18 chr7 5521506 CHRM3 chr1 240031715 Exonic hg19 NA AI205037 Out-of-frame Inter-chr p22.1 q43 112872 ChimerSeq ChiTaRs ChiTaRs NFE2L2-NFE2L2 NFE2L2 chr2 178095560 NFE2L2 chr2 178095563 Exonic hg19 NA BU679267 Out-of-frame Intra-chr q31.2 Oncogene Transcription factor q31.2 Oncogene Transcription factor 112873 ChimerSeq ChiTaRs ChiTaRs ZNF800-ZNF800 ZNF800 chr7 127010463 ZNF800 chr7 127010450 Exonic hg19 NA AI887707 Out-of-frame Intra-chr q31.33 Transcription factor q31.33 Transcription factor 112874 ChimerSeq ChiTaRs ChiTaRs KCNIP3-KCNIP3 KCNIP3 chr2 95969228 KCNIP3 chr2 95967435 Exonic hg19 NA BC019877 Out-of-frame Intra-chr q11.1 Transcription factor q11.1 Transcription factor 112875 ChimerSeq ChiTaRs ChiTaRs SLC27A3-SLC27A3 SLC27A3 chr1 153752551 SLC27A3 chr1 153752534 Exonic hg19 NA AW673387 Out-of-frame Intra-chr 112876 ChimerSeq ChiTaRs ChiTaRs KIAA1109-SSH2 KIAA1109 chr4 123159917 SSH2 chr17 28043613 Exonic hg19 NA AW856087 Out-of-frame Inter-chr q27 q11.2 112877 ChimerSeq ChiTaRs ChiTaRs SARDH-SARDH SARDH chr9 136582509 SARDH chr9 136528682 Exonic hg19 NA BC033217 Out-of-frame Intra-chr q34.2 q34.2 112878 ChimerSeq ChiTaRs ChiTaRs APCS-APCS APCS chr1 159557968 APCS chr1 159557963 Exonic hg19 NA CB164297 Out-of-frame Intra-chr q23.2 q23.2 112879 ChimerSeq ChiTaRs ChiTaRs SEPT7P2-ABCC2 SEPT7P2 chr7 45806932 ABCC2 chr10 101608951 Exonic hg19 NA CD358047 Out-of-frame Inter-chr p12.3 q24.2 112880 ChimerSeq ChiTaRs ChiTaRs MYO6-MYO6 MYO6 chr6 76474465 MYO6 chr6 76471333 Exonic hg19 NA BF800087 Out-of-frame Intra-chr q14.1 q14.1 112881 ChimerSeq ChiTaRs ChiTaRs GRM3-ABCB1 GRM3 chr7 86331687 ABCB1 chr7 87230325 Exonic hg19 NA AF345337 Out-of-frame Intra-chr q21.11 q21.12 112882 ChimerSeq ChiTaRs ChiTaRs RPL10-CSNK2A2 RPL10 chrX 153629254 CSNK2A2 chr16 58195561 Exonic hg19 NA BQ771607 Out-of-frame Inter-chr q28 Tumor suppressor gene q21 112883 ChimerSeq ChiTaRs ChiTaRs KIAA0947-PAFAH1B3 KIAA0947 chr5 5462718 PAFAH1B3 chr19 42801189 Exonic hg19 NA AK126937 Out-of-frame Inter-chr q13.2 112884 ChimerSeq ChiTaRs ChiTaRs OSR2-GOLIM4 OSR2 chr8 99964311 GOLIM4 chr3 167761209 Exonic hg19 NA BF591387 Out-of-frame Inter-chr q22.2 Transcription factor q26.2 112885 ChimerSeq ChiTaRs ChiTaRs PBX1-PBX1 PBX1 chr1 164551327 PBX1 chr1 164551404 Exonic hg19 NA AA846997 Out-of-frame Intra-chr q23.3 Oncogene Transcription factor q23.3 Oncogene Transcription factor 112886 ChimerSeq ChiTaRs ChiTaRs TRAPPC3-TRAPPC3 TRAPPC3 chr1 36602409 TRAPPC3 chr1 36602429 Exonic hg19 NA BU675677 Out-of-frame Intra-chr p34.3 p34.3 112887 ChimerSeq ChiTaRs ChiTaRs PDHX-CTDSPL PDHX chr11 34988339 CTDSPL chr3 38011245 Exonic hg19 NA BQ358867 Out-of-frame Inter-chr p13 p22.2 Tumor suppressor gene 112888 ChimerSeq ChiTaRs ChiTaRs PCDHGA1-PCDHGA1 PCDHGA1 chr5 140891106 PCDHGA1 chr5 140857653 Exonic hg19 NA BG818157 Out-of-frame Intra-chr q31.3 q31.3 112889 ChimerSeq ChiTaRs ChiTaRs LINC00476-PIK3IP1 LINC00476 chr9 98571571 PIK3IP1 chr22 31687178 Exonic hg19 NA DA167607 Out-of-frame Inter-chr q22.32 q12.2 112890 ChimerSeq ChiTaRs ChiTaRs AFF1-TRIM33 AFF1 chr4 88040933 TRIM33 chr1 115026919 Exonic hg19 NA BF368587 Out-of-frame Inter-chr q21.3 Oncogene p13.2 Oncogene 112891 ChimerSeq ChiTaRs ChiTaRs ILK-ADRBK2 ILK chr11 6632103 ADRBK2 chr22 26119011 Exonic hg19 NA AW304017 Out-of-frame Inter-chr p15.4 TKL:MLK Tumor suppressor gene 112892 ChimerSeq ChiTaRs ChiTaRs MADD-MADD MADD chr11 47312367 MADD chr11 47331117 Exonic hg19 NA AW363427 Out-of-frame Intra-chr p11.2 Tumor suppressor gene p11.2 Tumor suppressor gene 112893 ChimerSeq ChiTaRs ChiTaRs TTTY14-TTTY14 TTTY14 chrY 21152686 TTTY14 chrY 21152705 Exonic hg19 NA CB242307 Out-of-frame Intra-chr q11.222 q11.222 112894 ChimerSeq ChiTaRs ChiTaRs COX6C-AFF4 COX6C chr8 100899800 AFF4 chr5 132270576 Exonic hg19 NA AI335947 Out-of-frame Inter-chr q22.2 q31.1 112895 ChimerSeq ChiTaRs ChiTaRs NAV2-CBX5 NAV2 chr11 19771715 CBX5 chr12 54645915 Exonic hg19 NA BE083007 Out-of-frame Inter-chr p15.1 q13.13 Tumor suppressor gene 112896 ChimerSeq ChiTaRs ChiTaRs CASP2-ADAR CASP2 chr7 143003231 ADAR chr1 154562313 Exonic hg19 NA BE939197 Out-of-frame Inter-chr q34 Tumor suppressor gene q21.3 112897 ChimerSeq ChiTaRs ChiTaRs STAG2-STAG2 STAG2 chrX 123235746 STAG2 chrX 123235486 Exonic hg19 NA AA508477 Out-of-frame Intra-chr q25 Oncogene q25 Oncogene 112898 ChimerSeq ChiTaRs ChiTaRs PVT1-PVT1 PVT1 chr8 128813259 PVT1 chr8 128811824 Exonic hg19 NA BF749187 Out-of-frame Intra-chr q24.21 q24.21 112899 ChimerSeq ChiTaRs ChiTaRs LMO4-RGS3 LMO4 chr1 87813550 RGS3 chr9 116275827 Exonic hg19 NA T07447 Out-of-frame Inter-chr p22.3 q32 112900 ChimerSeq ChiTaRs ChiTaRs ARHGEF3-RPL23 ARHGEF3 chr3 56925404 RPL23 chr17 37006331 Exonic hg19 NA BU677197 Out-of-frame Inter-chr p14.3 q12 112901 ChimerSeq ChiTaRs ChiTaRs RPL32-SERPINA9 RPL32 chr3 12877644 SERPINA9 chr14 94935855 Exonic hg19 NA AA505147 Out-of-frame Inter-chr p25.2 q32.13 112902 ChimerSeq ChiTaRs ChiTaRs HCN1-HCN1 HCN1 chr5 45262276 HCN1 chr5 45259352 Exonic hg19 NA BX537747 Out-of-frame Intra-chr p12 p12 112903 ChimerSeq ChiTaRs ChiTaRs MOB3B-MLEC MOB3B chr9 27393478 MLEC chr12 121134483 Exonic hg19 NA BE930957 Out-of-frame Inter-chr p21.2 q24.31 112904 ChimerSeq ChiTaRs ChiTaRs GNB1-GNB1 GNB1 chr1 1716886 GNB1 chr1 1716745 Exonic hg19 NA BI022537 Out-of-frame Intra-chr p36.33 p36.33 112905 ChimerSeq ChiTaRs ChiTaRs TMEM51-TMEM51 TMEM51 chr1 15515537 TMEM51 chr1 15515376 Exonic hg19 NA CV427167 Out-of-frame Intra-chr p36.21 p36.21 112906 ChimerSeq ChiTaRs ChiTaRs API5-PLIN3 API5 chr11 43346658 PLIN3 chr19 4838860 Exonic hg19 NA BE551507 Out-of-frame Inter-chr p12 p13.3 112907 ChimerSeq ChiTaRs ChiTaRs ELN-RBBP4 ELN chr7 73455580 RBBP4 chr1 33147412 Exonic hg19 NA DB264407 Out-of-frame Inter-chr q11.23 p35.1 112908 ChimerSeq ChiTaRs ChiTaRs CENPP-CENPP CENPP chr9 95146404 CENPP chr9 95146249 Exonic hg19 NA BI494157 Out-of-frame Intra-chr q22.31 q22.31 112909 ChimerSeq ChiTaRs ChiTaRs TBC1D5-GNAO1 TBC1D5 chr3 17780698 GNAO1 chr16 56378567 Exonic hg19 NA BF362557 Out-of-frame Inter-chr p24.3 q13 112910 ChimerSeq ChiTaRs ChiTaRs POU6F2-ZNF366 POU6F2 chr7 39368420 ZNF366 chr5 71739730 Exonic hg19 NA BF996277 Out-of-frame Inter-chr p14.1 Tumor suppressor gene Transcription factor q13.2 Tumor suppressor gene Transcription factor 112911 ChimerSeq ChiTaRs ChiTaRs BMPR2-STK10 BMPR2 chr2 203432919 STK10 chr5 171471264 Exonic hg19 NA CA439717 Out-of-frame Inter-chr q33.1 TKL:STKR Tumor suppressor gene q35.1 Tumor suppressor gene 112912 ChimerSeq ChiTaRs ChiTaRs FHL2-TNKS1BP1 FHL2 chr2 106025429 TNKS1BP1 chr11 57067207 Exonic hg19 NA BF844047 Out-of-frame Inter-chr q12.2 q12.1 112913 ChimerSeq ChiTaRs ChiTaRs C8orf12-C8orf12 C8orf12 chr8 11280431 C8orf12 chr8 11280437 Exonic hg19 NA AW409157 Out-of-frame Intra-chr 112914 ChimerSeq ChiTaRs ChiTaRs FBLN7-ACAN FBLN7 chr2 112945786 ACAN chr15 89401685 Exonic hg19 NA BF061357 Out-of-frame Inter-chr q13 q26.1 112915 ChimerSeq ChiTaRs ChiTaRs PMVK-IKBKAP PMVK chr1 154909422 IKBKAP chr9 111633250 Exonic hg19 NA BC000237 Out-of-frame Inter-chr q21.3 q31.3 112916 ChimerSeq ChiTaRs ChiTaRs CALD1-CALD1 CALD1 chr7 134654511 CALD1 chr7 134654504 Exonic hg19 NA BQ366127 Out-of-frame Intra-chr q33 q33 112917 ChimerSeq ChiTaRs ChiTaRs HYAL3-HYAL3 HYAL3 chr3 50332530 HYAL3 chr3 50330592 Exonic hg19 NA BQ441777 Out-of-frame Intra-chr p21.31 p21.31 112918 ChimerSeq ChiTaRs ChiTaRs SFTPB-ERP27 SFTPB chr2 85886596 ERP27 chr12 15070129 Exonic hg19 NA BM998827 Out-of-frame Inter-chr p11.2 p12.3 112919 ChimerSeq ChiTaRs ChiTaRs LPIN1-LPIN1 LPIN1 chr2 11959572 LPIN1 chr2 11959577 Exonic hg19 NA BF352637 Out-of-frame Intra-chr p25.1 p25.1 112920 ChimerSeq ChiTaRs ChiTaRs COL3A1-COL3A1 COL3A1 chr2 189877123 COL3A1 chr2 189876885 Exonic hg19 NA AA570347 Out-of-frame Intra-chr q32.2 q32.2 112921 ChimerSeq ChiTaRs ChiTaRs YAE1D1-YAE1D1 YAE1D1 chr7 39612038 YAE1D1 chr7 39612053 Exonic hg19 NA AW819977 Out-of-frame Intra-chr p14.1 p14.1 112922 ChimerSeq ChiTaRs ChiTaRs MAL-RGL1 MAL chr2 95719550 RGL1 chr1 183896740 Exonic hg19 NA AW950587 Out-of-frame Inter-chr q11.1 Tumor suppressor gene q25.3 112923 ChimerSeq ChiTaRs ChiTaRs DAXX-VAPB DAXX chr6 4519208 VAPB chr20 57020285 Exonic hg19 NA AI093537 Out-of-frame Inter-chr Oncogene q13.32 112924 ChimerSeq ChiTaRs ChiTaRs RNGTT-ZMYM4 RNGTT chr6 89407455 ZMYM4 chr1 35769795 Exonic hg19 NA AK024577 Out-of-frame Inter-chr q15 p34.3 112925 ChimerSeq ChiTaRs ChiTaRs LOC154822-LOC154822 LOC154822 chr7 158820398 LOC154822 chr7 158820494 Exonic hg19 NA BG819777 Out-of-frame Intra-chr 112926 ChimerSeq ChiTaRs ChiTaRs MKRN1-MKRN1 MKRN1 chr7 140166171 MKRN1 chr7 140165914 Exonic hg19 NA BE073317 Out-of-frame Intra-chr q34 q34 112927 ChimerSeq ChiTaRs ChiTaRs NTRK2-NTRK2 NTRK2 chr9 87342796 NTRK2 chr9 87342767 Exonic hg19 NA EB388087 Out-of-frame Intra-chr q21.33 Oncogene q21.33 Oncogene 112928 ChimerSeq ChiTaRs ChiTaRs MTDH-CUL5 MTDH chr8 98668383 CUL5 chr11 107881793 Exonic hg19 NA BG956537 Out-of-frame Inter-chr q22.1 q22.3 Tumor suppressor gene 112929 ChimerSeq ChiTaRs ChiTaRs DMD-TMEM165 DMD chrX 31893460 TMEM165 chr4 56284474 Exonic hg19 NA BX282127 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q12 112930 ChimerSeq ChiTaRs ChiTaRs ERGIC1-ERGIC1 ERGIC1 chr5 172305780 ERGIC1 chr5 172305614 Exonic hg19 NA BE084567 Out-of-frame Intra-chr q35.1 q35.1 112931 ChimerSeq ChiTaRs ChiTaRs B3GAT2-SMAP1 B3GAT2 chr6 71666248 SMAP1 chr6 71571544 Exonic hg19 NA DR002957 Out-of-frame Intra-chr q13 q13 112932 ChimerSeq ChiTaRs ChiTaRs CCNY-CCNY CCNY chr10 35734596 CCNY chr10 35734196 Exonic hg19 NA BF872107 Out-of-frame Intra-chr p11.21 p11.21 112933 ChimerSeq ChiTaRs ChiTaRs MOB2-WIPI1 MOB2 chr11 1765145 WIPI1 chr17 66441826 Exonic hg19 NA BF946607 Out-of-frame Inter-chr p15.5 q24.2 112934 ChimerSeq ChiTaRs ChiTaRs ZZZ3-RAD51B ZZZ3 chr1 78106038 RAD51B chr14 68602941 Exonic hg19 NA AA420457 Out-of-frame Inter-chr p31.1 Transcription factor q24.1 112935 ChimerSeq ChiTaRs ChiTaRs LUZP1-SUGP2 LUZP1 chr1 23432254 SUGP2 chr19 19133287 Exonic hg19 NA BE082677 Out-of-frame Inter-chr p36.12 p13.11 112936 ChimerSeq ChiTaRs ChiTaRs KIF25-AS1-LMNA KIF25-AS1 chr6 168397797 LMNA chr1 156084778 Exonic hg19 NA AK057997 Out-of-frame Inter-chr q27 q22 Tumor suppressor gene 112937 ChimerSeq ChiTaRs ChiTaRs USH1C-MTCH1 USH1C chr11 17546048 MTCH1 chr6 36945901 Exonic hg19 NA BF808207 Out-of-frame Inter-chr p15.1 p21.2 112938 ChimerSeq ChiTaRs ChiTaRs CYB561D2-HNRNPAB CYB561D2 chr3 50391493 HNRNPAB chr5 177634164 Exonic hg19 NA AI738547 Out-of-frame Inter-chr p21.31 Tumor suppressor gene q35.3 112939 ChimerSeq ChiTaRs ChiTaRs USP9X-ANP32B USP9X chrX 41089857 ANP32B chr9 100745638 Exonic hg19 NA BE254787 Out-of-frame Inter-chr p11.4 Oncogene q22.33 112940 ChimerSeq ChiTaRs ChiTaRs KIF9-KIF9 KIF9 chr3 47316851 KIF9 chr3 47316949 Exonic hg19 NA BF195017 Out-of-frame Intra-chr p21.31 p21.31 112941 ChimerSeq ChiTaRs ChiTaRs ATXN1-PCNX ATXN1 chr6 16350446 PCNX chr14 71579580 Exonic hg19 NA BE172787 Out-of-frame Inter-chr p22.3 112942 ChimerSeq ChiTaRs ChiTaRs NADK2-BRD2 NADK2 chr5 36218417 BRD2 chr6 4422742 Exonic hg19 NA BF366167 Out-of-frame Inter-chr p13.2 Atypical:BRD 112943 ChimerSeq ChiTaRs ChiTaRs NEK7-MALT1 NEK7 chr1 198175036 MALT1 chr18 56414751 Exonic hg19 NA BF115201 Out-of-frame Inter-chr q31.3 Other:NEK q21.32 Oncogene 112944 ChimerSeq ChiTaRs ChiTaRs MCL1-SERPINA1 MCL1 chr1 150547317 SERPINA1 chr14 94849277 Exonic hg19 NA AA969777 Out-of-frame Inter-chr q21.2 Oncogene q32.13 112945 ChimerSeq ChiTaRs ChiTaRs SYAP1-CPD SYAP1 chrX 16772996 CPD chr17 28771373 Exonic hg19 NA BF378747 Out-of-frame Inter-chr p22.2 q11.2 Tumor suppressor gene 112946 ChimerSeq ChiTaRs ChiTaRs ZNF474-VPS13D ZNF474 chr5 121487621 VPS13D chr1 12315517 Exonic hg19 NA BF356547 Out-of-frame Inter-chr q23.2 Transcription factor p36.22 112947 ChimerSeq ChiTaRs ChiTaRs TEX261-TEX261 TEX261 chr2 71215082 TEX261 chr2 71215171 Exonic hg19 NA BE965617 Out-of-frame Intra-chr p13.3 p13.3 112948 ChimerSeq ChiTaRs ChiTaRs FRZB-FRZB FRZB chr2 183699356 FRZB chr2 183698745 Exonic hg19 NA AA746957 Out-of-frame Intra-chr q32.1 q32.1 112949 ChimerSeq ChiTaRs ChiTaRs NGFRAP1-UBE2F NGFRAP1 chrX 102632997 UBE2F chr2 238893631 Exonic hg19 NA BU854717 Out-of-frame Inter-chr q37.3 112950 ChimerSeq ChiTaRs ChiTaRs EIF4G3-EIF4G3 EIF4G3 chr1 21307723 EIF4G3 chr1 21295967 Exonic hg19 NA BG223267 Out-of-frame Intra-chr p36.12 p36.12 112951 ChimerSeq ChiTaRs ChiTaRs CLDN4-NEAT1 CLDN4 chr7 73247011 NEAT1 chr11 65193337 Exonic hg19 NA AW273767 Out-of-frame Inter-chr q11.23 q13.1 112952 ChimerSeq ChiTaRs ChiTaRs EIF5B-TXNDC9 EIF5B chr2 99988192 TXNDC9 chr2 99954023 Exonic hg19 NA BE671617 Out-of-frame Intra-chr q11.2 q11.2 112953 ChimerSeq ChiTaRs ChiTaRs ASAH1-ASAH1 ASAH1 chr8 17914320 ASAH1 chr8 17914291 Exonic hg19 NA BU690017 Out-of-frame Intra-chr p22 p22 112954 ChimerSeq ChiTaRs ChiTaRs SPIDR-DST SPIDR chr8 48586491 DST chr6 56341320 Exonic hg19 NA BF359267 Out-of-frame Inter-chr q11.21 p12.1 Oncogene 112955 ChimerSeq ChiTaRs ChiTaRs TRIM33-STK17B TRIM33 chr1 114955093 STK17B chr2 197014396 Exonic hg19 NA AW968667 Out-of-frame Inter-chr p13.2 Oncogene q32.3 112956 ChimerSeq ChiTaRs ChiTaRs PARP12-MSH2 PARP12 chr7 139727195 MSH2 chr2 47893893 Exonic hg19 NA BI014517 Out-of-frame Inter-chr q34 p21 Oncogene Tumor suppressor gene 112957 ChimerSeq ChiTaRs ChiTaRs MAP3K6-MAP3K6 MAP3K6 chr1 27689943 MAP3K6 chr1 27688631 Exonic hg19 NA W28297 Out-of-frame Intra-chr p36.11 STE:STE11 p36.11 STE:STE11 112958 ChimerSeq ChiTaRs ChiTaRs MRPS30-MRPS30 MRPS30 chr5 44815442 MRPS30 chr5 44815455 Exonic hg19 NA D11777 Out-of-frame Intra-chr p12 p12 112959 ChimerSeq ChiTaRs ChiTaRs HIPK1-UROD HIPK1 chr1 114516256 UROD chr1 45480619 Exonic hg19 NA BE772547 Out-of-frame Intra-chr p13.2 CMGC:DYRK p34.1 112960 ChimerSeq ChiTaRs ChiTaRs UQCRQ-FGF14 UQCRQ chr5 132203379 FGF14 chr13 103018966 Exonic hg19 NA AV742377 Out-of-frame Inter-chr q31.1 q33.1 112961 ChimerSeq ChiTaRs ChiTaRs ARHGEF4-ECE1 ARHGEF4 chr2 131804123 ECE1 chr1 21543921 Exonic hg19 NA BF964057 Out-of-frame Inter-chr q21.1 p36.12 112962 ChimerSeq ChiTaRs ChiTaRs TRAF3IP2-AS1-MEF2C TRAF3IP2-AS1 chr6 111834239 MEF2C chr5 88016690 Exonic hg19 NA T06577 Out-of-frame Inter-chr q21 q14.3 Tumor suppressor gene 112963 ChimerSeq ChiTaRs ChiTaRs RAPGEF1-RAPGEF1 RAPGEF1 chr9 134454659 RAPGEF1 chr9 134455676 Exonic hg19 NA CB956427 Out-of-frame Intra-chr q34.13 q34.13 112964 ChimerSeq ChiTaRs ChiTaRs ATP1B1-ATP1B1 ATP1B1 chr1 169101015 ATP1B1 chr1 169096537 Exonic hg19 NA BM979817 Out-of-frame Intra-chr q24.2 q24.2 112965 ChimerSeq ChiTaRs ChiTaRs GAK-ARHGEF1 GAK chr4 873676 ARHGEF1 chr19 42408367 Exonic hg19 NA BF896167 Out-of-frame Inter-chr p16.3 Other:NAK q13.2 112966 ChimerSeq ChiTaRs ChiTaRs SSNA1-SSNA1 SSNA1 chr9 140084741 SSNA1 chr9 140084738 Exonic hg19 NA BG222117 Out-of-frame Intra-chr q34.3 q34.3 112967 ChimerSeq ChiTaRs ChiTaRs DNAJC11-LDB2 DNAJC11 chr1 6713687 LDB2 chr4 16785002 Exonic hg19 NA AW935247 Out-of-frame Inter-chr p36.31 Tumor suppressor gene p15.32 112968 ChimerSeq ChiTaRs ChiTaRs TCTA-TCTA TCTA chr3 49453499 TCTA chr3 49453527 Exonic hg19 NA BE693237 Out-of-frame Intra-chr p21.31 p21.31 112969 ChimerSeq ChiTaRs ChiTaRs HMGN3-NCOA2 HMGN3 chr6 79923200 NCOA2 chr8 71294826 Exonic hg19 NA BG222207 Out-of-frame Inter-chr q14.1 Transcription factor q13.3 Oncogene Transcription factor 112970 ChimerSeq ChiTaRs ChiTaRs PIGY-JUN PIGY chr4 89444895 JUN chr1 59248346 Exonic hg19 NA BM888517 Out-of-frame Inter-chr q22.1 p32.1 Oncogene Transcription factor 112971 ChimerSeq ChiTaRs ChiTaRs NT5C2-NT5C2 NT5C2 chr10 104879603 NT5C2 chr10 104878404 Exonic hg19 NA BE936897 Out-of-frame Intra-chr q24.33 q24.33 112972 ChimerSeq ChiTaRs ChiTaRs WAC-WAC WAC chr10 28874622 WAC chr10 28873451 Exonic hg19 NA BY799607 Out-of-frame Intra-chr p12.1 p12.1 112973 ChimerSeq ChiTaRs ChiTaRs ARFGEF1-PPAP2A ARFGEF1 chr8 68109509 PPAP2A chr5 54821389 Exonic hg19 NA AA505717 Out-of-frame Inter-chr q13.2 112974 ChimerSeq ChiTaRs ChiTaRs NT5DC1-WDR59 NT5DC1 chr6 116489240 WDR59 chr16 74991963 Exonic hg19 NA BF335827 Out-of-frame Inter-chr q22.1 q23.1 112975 ChimerSeq ChiTaRs ChiTaRs SCML2-SCML2 SCML2 chrX 18275025 SCML2 chrX 18257437 Exonic hg19 NA AL833937 Out-of-frame Intra-chr p22.13 p22.13 112976 ChimerSeq ChiTaRs ChiTaRs CEP68-CFLAR CEP68 chr2 65301624 CFLAR chr2 201997750 Exonic hg19 NA AI289177 Out-of-frame Intra-chr p14 q33.1 112977 ChimerSeq ChiTaRs ChiTaRs HIST1H2BD-LRRC27 HIST1H2BD chr6 26158592 LRRC27 chr10 134158049 Exonic hg19 NA DA788717 Out-of-frame Inter-chr p22.2 q26.3 112978 ChimerSeq ChiTaRs ChiTaRs GALNT2-GALNT2 GALNT2 chr1 230272507 GALNT2 chr1 230305798 Exonic hg19 NA AW992137 Out-of-frame Intra-chr q42.13 q42.13 112979 ChimerSeq ChiTaRs ChiTaRs SPATA1-VPS26A SPATA1 chr1 84977412 VPS26A chr10 70920467 Exonic hg19 NA AI378347 Out-of-frame Inter-chr p22.3 q22.1 112980 ChimerSeq ChiTaRs ChiTaRs FAM193B-FAM193B FAM193B chr5 176980270 FAM193B chr5 176965031 Exonic hg19 NA BI045467 Out-of-frame Intra-chr q35.3 q35.3 112981 ChimerSeq ChiTaRs ChiTaRs KAT6A-CREBBP KAT6A chr8 41794035 CREBBP chr16 3925853 Exonic hg19 NA AJ315158 Out-of-frame Inter-chr p11.21 Oncogene p13.3 Oncogene Tumor suppressor gene KB Pub Seq+ 112982 ChimerSeq ChiTaRs ChiTaRs DSP-DSP DSP chr6 7585408 DSP chr6 7585212 Exonic hg19 NA AW391547 Out-of-frame Intra-chr p24.3 Tumor suppressor gene p24.3 Tumor suppressor gene 112983 ChimerSeq ChiTaRs ChiTaRs FAM114A1-QSOX1 FAM114A1 chr4 38870162 QSOX1 chr1 180139015 Exonic hg19 NA BF996657 Out-of-frame Inter-chr p14 q25.2 112984 ChimerSeq ChiTaRs ChiTaRs TIE1-DIP2C TIE1 chr1 43785020 DIP2C chr10 697290 Exonic hg19 NA BF995977 Out-of-frame Inter-chr p34.2 TK:Tie p15.3 112985 ChimerSeq ChiTaRs ChiTaRs BSDC1-PDLIM5 BSDC1 chr1 32838444 PDLIM5 chr4 95498510 Exonic hg19 NA BF991287 Out-of-frame Inter-chr p35.1 q22.3 112986 ChimerSeq ChiTaRs ChiTaRs DARS-ZNF148 DARS chr2 136671049 ZNF148 chr3 125029129 Exonic hg19 NA AF090907 Out-of-frame Inter-chr q21.3 q21.2 Transcription factor 112987 ChimerSeq ChiTaRs ChiTaRs ZMAT1-ZMAT1 ZMAT1 chrX 101138552 ZMAT1 chrX 101138853 Exonic hg19 NA CA313807 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Transcription factor 112988 ChimerSeq ChiTaRs ChiTaRs ACTR3-RPS6KA3 ACTR3 chr2 114715834 RPS6KA3 chrX 20171470 Exonic hg19 NA CA843287 Out-of-frame Inter-chr q14.1 p22.12 112989 ChimerSeq ChiTaRs ChiTaRs HLA-DPA1-NKIRAS1 HLA-DPA1 chr6 4516993 NKIRAS1 chr3 23961370 Exonic hg19 NA BG542717 Out-of-frame Inter-chr p24.2 112990 ChimerSeq ChiTaRs ChiTaRs RAP2B-GABBR1 RAP2B chr3 152881790 GABBR1 chr6 29574656 Exonic hg19 NA AW970387 Out-of-frame Inter-chr q25.2 112991 ChimerSeq ChiTaRs ChiTaRs CRY2-CRY2 CRY2 chr11 45889378 CRY2 chr11 45894280 Exonic hg19 NA AW858937 Out-of-frame Intra-chr p11.2 p11.2 112992 ChimerSeq ChiTaRs ChiTaRs OXSR1-CALR OXSR1 chr3 38289224 CALR chr19 13050895 Exonic hg19 NA BE005287 Out-of-frame Inter-chr p22.2 p13.13 112993 ChimerSeq ChiTaRs ChiTaRs MLIP-GRIK4 MLIP chr6 54032856 GRIK4 chr11 120426988 Exonic hg19 NA BF929277 Out-of-frame Inter-chr p12.1 q23.3 112994 ChimerSeq ChiTaRs ChiTaRs NHEJ1-CNPPD1 NHEJ1 chr2 219940536 CNPPD1 chr2 220036948 Exonic hg19 NA BE089557 Out-of-frame Intra-chr q35 q35 112995 ChimerSeq ChiTaRs ChiTaRs SERP1-RABGAP1L SERP1 chr3 150260813 RABGAP1L chr1 174439429 Exonic hg19 NA BF089547 Out-of-frame Inter-chr q25.1 q25.1 112996 ChimerSeq ChiTaRs ChiTaRs RAPGEF1-DCK RAPGEF1 chr9 134454357 DCK chr4 71888127 Exonic hg19 NA BG315007 Out-of-frame Inter-chr q34.13 q13.3 112997 ChimerSeq ChiTaRs ChiTaRs NUDT16-WFDC2 NUDT16 chr3 131107294 WFDC2 chr20 44110102 Exonic hg19 NA BU680617 Out-of-frame Inter-chr q22.1 q13.12 112998 ChimerSeq ChiTaRs ChiTaRs PRELID1-NPIPB7 PRELID1 chr5 176733950 NPIPB7 chr16 28854112 Exonic hg19 NA BC023617 Out-of-frame Inter-chr q35.3 p12.1 112999 ChimerSeq ChiTaRs ChiTaRs SNX8-SNX8 SNX8 chr7 2331650 SNX8 chr7 2345606 Exonic hg19 NA BF771547 Out-of-frame Intra-chr p22.3 p22.3 113000 ChimerSeq ChiTaRs ChiTaRs SLC3A2-SLC3A2 SLC3A2 chr11 62648634 SLC3A2 chr11 62652135 Exonic hg19 NA BQ354047 Out-of-frame Intra-chr q12.3 q12.3 113001 ChimerSeq ChiTaRs ChiTaRs STXBP1-STXBP1 STXBP1 chr9 130453823 STXBP1 chr9 130435472 Exonic hg19 NA BP250257 Out-of-frame Intra-chr q34.11 q34.11 113002 ChimerSeq ChiTaRs ChiTaRs HSD17B11-HSD17B11 HSD17B11 chr4 88257946 HSD17B11 chr4 88257762 Exonic hg19 NA AW022407 Out-of-frame Intra-chr q22.1 q22.1 113003 ChimerSeq ChiTaRs ChiTaRs KLHDC3-ATN1 KLHDC3 chr6 42988543 ATN1 chr12 7045837 Exonic hg19 NA L10377 Out-of-frame Inter-chr p21.1 p13.31 113004 ChimerSeq ChiTaRs ChiTaRs KLHL7-BRD1 KLHL7 chr7 23182025 BRD1 chr22 50167135 Exonic hg19 NA T07017 Out-of-frame Inter-chr p15.3 q13.33 113005 ChimerSeq ChiTaRs ChiTaRs LAMB3-KIFC3 LAMB3 chr1 209791973 KIFC3 chr16 57818591 Exonic hg19 NA BE715187 Out-of-frame Inter-chr q32.2 q21 113006 ChimerSeq ChiTaRs ChiTaRs TMEM50A-TMEM50A TMEM50A chr1 25688852 TMEM50A chr1 25688758 Exonic hg19 NA D82127 3'UTR-CDS Intra-chr p36.11 p36.11 113007 ChimerSeq ChiTaRs ChiTaRs STMN2-FAT1 STMN2 chr8 80577148 FAT1 chr4 187628005 Exonic hg19 NA BF963877 Out-of-frame Inter-chr q21.13 q35.2 Tumor suppressor gene 113008 ChimerSeq ChiTaRs ChiTaRs LOC100132987-TBC1D16 LOC100132987 chr10 80235828 TBC1D16 chr17 77924676 Exonic hg19 NA AI990017 Out-of-frame Inter-chr q25.3 113009 ChimerSeq ChiTaRs ChiTaRs LUC7L2-NBAS LUC7L2 chr7 139086994 NBAS chr2 15309231 Exonic hg19 NA BF229917 Out-of-frame Inter-chr q34 p24.3 113010 ChimerSeq ChiTaRs ChiTaRs SCARB2-SCARB2 SCARB2 chr4 77080112 SCARB2 chr4 77080072 Exonic hg19 NA BE762697 Out-of-frame Intra-chr q21.1 q21.1 113011 ChimerSeq ChiTaRs ChiTaRs SAMD11-ZFYVE27 SAMD11 chr1 880009 ZFYVE27 chr10 99516785 Exonic hg19 NA AI948457 Out-of-frame Inter-chr p36.33 q24.2 113012 ChimerSeq ChiTaRs ChiTaRs MSRA-S100A9 MSRA chr8 10202239 S100A9 chr1 153333194 Exonic hg19 NA BF873587 Out-of-frame Inter-chr p23.1 q21.3 113013 ChimerSeq ChiTaRs ChiTaRs MPHOSPH10-SLC13A3 MPHOSPH10 chr2 71376376 SLC13A3 chr20 45259832 Exonic hg19 NA AW606827 Out-of-frame Inter-chr p13.3 q13.12 113014 ChimerSeq ChiTaRs ChiTaRs SAT1-SAT1 SAT1 chrX 23804110 SAT1 chrX 23803841 Exonic hg19 NA AW582417 Out-of-frame Intra-chr p22.11 p22.11 113015 ChimerSeq ChiTaRs ChiTaRs CLU-NEGR1 CLU chr8 27466071 NEGR1 chr1 72316573 Exonic hg19 NA AA968587 Out-of-frame Inter-chr p21.1 Tumor suppressor gene p31.1 113016 ChimerSeq ChiTaRs ChiTaRs VPS52-FDPS VPS52 chr6 4708717 FDPS chr1 155284139 Exonic hg19 NA CA312317 Out-of-frame Inter-chr q22 113017 ChimerSeq ChiTaRs ChiTaRs ITPR3-FXR2 ITPR3 chr6 33658263 FXR2 chr17 7499289 Exonic hg19 NA BF848867 Out-of-frame Inter-chr p21.31 p13.1 113018 ChimerSeq ChiTaRs ChiTaRs TF-CLDN4 TF chr3 133497623 CLDN4 chr7 73247009 Exonic hg19 NA AI110837 Out-of-frame Inter-chr q22.1 q11.23 113019 ChimerSeq ChiTaRs ChiTaRs CTTNBP2NL-TUBB4B CTTNBP2NL chr1 112960268 TUBB4B chr9 140135754 Exonic hg19 NA BE903667 Out-of-frame Inter-chr p13.2 q34.3 113020 ChimerSeq ChiTaRs ChiTaRs TSC22D3-TSC22D3 TSC22D3 chrX 106957335 TSC22D3 chrX 106956922 Exonic hg19 NA AA099067 Out-of-frame Intra-chr q22.3 q22.3 113021 ChimerSeq ChiTaRs ChiTaRs PLXND1-RDX PLXND1 chr3 129274275 RDX chr11 110150426 Exonic hg19 NA DR979737 Out-of-frame Inter-chr q22.1 q22.3 113022 ChimerSeq ChiTaRs ChiTaRs GHITM-GHITM GHITM chr10 85912853 GHITM chr10 85912622 Exonic hg19 NA BI047927 Out-of-frame Intra-chr q23.1 q23.1 113023 ChimerSeq ChiTaRs ChiTaRs SSR3-PRPF6 SSR3 chr3 156259394 PRPF6 chr20 62613241 Exonic hg19 NA BQ772087 Out-of-frame Inter-chr q25.31 q13.33 113024 ChimerSeq ChiTaRs ChiTaRs ABLIM3-ALB ABLIM3 chr5 148534277 ALB chr4 74270030 Exonic hg19 NA AV654807 Out-of-frame Inter-chr q32 q13.3 113025 ChimerSeq ChiTaRs ChiTaRs ADD3-SYNPO2 ADD3 chr10 111881888 SYNPO2 chr4 119980868 Exonic hg19 NA CB998857 Out-of-frame Inter-chr q25.1 q26 Tumor suppressor gene 113026 ChimerSeq ChiTaRs ChiTaRs CCSER1-C5orf34 CCSER1 chr4 92473923 C5orf34 chr5 43506993 Exonic hg19 NA CX779624 Out-of-frame Inter-chr q22.1 p12 113027 ChimerSeq ChiTaRs ChiTaRs CDKN1A-CDKN1A CDKN1A chr6 36654614 CDKN1A chr6 36653723 Exonic hg19 NA CN481397 Out-of-frame Intra-chr p21.2 Tumor suppressor gene p21.2 Tumor suppressor gene 113028 ChimerSeq ChiTaRs ChiTaRs SPATA17-SPATA17 SPATA17 chr1 218040492 SPATA17 chr1 217975060 Exonic hg19 NA CB243437 Out-of-frame Intra-chr q41 q41 113029 ChimerSeq ChiTaRs ChiTaRs CDYL-EXOC2 CDYL chr6 4773415 EXOC2 chr6 564636 Exonic hg19 NA CN426887 Out-of-frame Intra-chr p25.1 p25.3 113030 ChimerSeq ChiTaRs ChiTaRs ZNF141-ZNF254 ZNF141 chr4 369764 ZNF254 chr19 24311986 Exonic hg19 NA BG403577 Out-of-frame Inter-chr p16.3 Transcription factor p12 Transcription factor 113031 ChimerSeq ChiTaRs ChiTaRs RER1-KIF26B RER1 chr1 2336877 KIF26B chr1 245373844 Exonic hg19 NA BE764077 Out-of-frame Intra-chr p36.32 113032 ChimerSeq ChiTaRs ChiTaRs PHAX-PHAX PHAX chr5 125961916 PHAX chr5 125961944 Exonic hg19 NA AI808197 Out-of-frame Intra-chr q23.2 q23.2 113033 ChimerSeq ChiTaRs ChiTaRs CCDC88A-CCDC88A CCDC88A chr2 55562077 CCDC88A chr2 55561560 Exonic hg19 NA AI873507 Out-of-frame Intra-chr p16.1 p16.1 113034 ChimerSeq ChiTaRs ChiTaRs RPL27A-RPL27A RPL27A chr11 8706438 RPL27A chr11 8707262 Exonic hg19 NA BF828517 Out-of-frame Intra-chr p15.4 p15.4 113035 ChimerSeq ChiTaRs ChiTaRs TAF8-TAF8 TAF8 chr6 42047740 TAF8 chr6 42047814 Exonic hg19 NA AI969977 Out-of-frame Intra-chr p21.1 p21.1 113036 ChimerSeq ChiTaRs ChiTaRs TNFAIP8-TMEM216 TNFAIP8 chr5 118715826 TMEM216 chr11 61164920 Exonic hg19 NA BF926967 Out-of-frame Inter-chr q23.1 q12.2 113037 ChimerSeq ChiTaRs ChiTaRs EGR1-EGR1 EGR1 chr5 137802719 EGR1 chr5 137802934 Exonic hg19 NA EL595027 Out-of-frame Intra-chr q31.2 Tumor suppressor gene Transcription factor q31.2 Tumor suppressor gene Transcription factor 113038 ChimerSeq ChiTaRs ChiTaRs SCFD2-KDM3B SCFD2 chr4 54140146 KDM3B chr5 137705662 Exonic hg19 NA BF919717 Out-of-frame Inter-chr q12 q31.2 Tumor suppressor gene 113039 ChimerSeq ChiTaRs ChiTaRs ARID1A-TFPI ARID1A chr1 27108595 TFPI chr2 188369030 Exonic hg19 NA CK300697 Out-of-frame Inter-chr p36.11 Oncogene Tumor suppressor gene q32.1 113040 ChimerSeq ChiTaRs ChiTaRs CD74-CD74 CD74 chr5 149781367 CD74 chr5 149781364 Exonic hg19 NA H21087 Out-of-frame Intra-chr q33.1 q33.1 113041 ChimerSeq ChiTaRs ChiTaRs RD3-RD3 RD3 chr1 211650404 RD3 chr1 211649864 Exonic hg19 NA BX110207 Out-of-frame Intra-chr q32.3 q32.3 113042 ChimerSeq ChiTaRs ChiTaRs BCL6-LPHN2 BCL6 chr3 187454954 LPHN2 chr1 82303027 Exonic hg19 NA BG929017 Out-of-frame Inter-chr q27.3 Oncogene Transcription factor 113043 ChimerSeq ChiTaRs ChiTaRs CWC22-CUX1 CWC22 chr2 180823162 CUX1 chr7 101801840 Exonic hg19 NA M85367 Out-of-frame Inter-chr q31.3 q22.1 Tumor suppressor gene Transcription factor 113044 ChimerSeq ChiTaRs ChiTaRs ARSB-DENND2A ARSB chr5 78073407 DENND2A chr7 140293273 Exonic hg19 NA AW236827 Out-of-frame Inter-chr q14.1 q34 113045 ChimerSeq ChiTaRs ChiTaRs CLPTM1L-SLC25A43 CLPTM1L chr5 1323059 SLC25A43 chrX 118588194 Exonic hg19 NA BF351017 Out-of-frame Inter-chr p15.33 q24 113046 ChimerSeq ChiTaRs ChiTaRs CNKSR3-CNKSR3 CNKSR3 chr6 154719115 CNKSR3 chr6 154718461 Exonic hg19 NA BX092237 Out-of-frame Intra-chr q25.2 q25.2 113047 ChimerSeq ChiTaRs ChiTaRs MYOD1-MYOD1 MYOD1 chr11 17743047 MYOD1 chr11 17743068 Exonic hg19 NA BE298077 Out-of-frame Intra-chr p15.1 Transcription factor p15.1 Transcription factor 113048 ChimerSeq ChiTaRs ChiTaRs CD74-AUTS2 CD74 chr5 149781656 AUTS2 chr7 69285583 Exonic hg19 NA BF840517 Out-of-frame Inter-chr q33.1 q11.22 113049 ChimerSeq ChiTaRs ChiTaRs ANKRD36B-PTPRK ANKRD36B chr2 98158442 PTPRK chr6 128294150 Exonic hg19 NA BF750397 Out-of-frame Inter-chr q11.2 Tumor suppressor gene 113050 ChimerSeq ChiTaRs ChiTaRs RIPK1-RIPK1 RIPK1 chr6 3106201 RIPK1 chr6 3111034 Exonic hg19 NA AA143087 Out-of-frame Intra-chr p25.2 TKL:RIPK p25.2 TKL:RIPK 113051 ChimerSeq ChiTaRs ChiTaRs FLJ23867-FLJ23867 FLJ23867 chr1 180168945 FLJ23867 chr1 180168305 Exonic hg19 NA AW861637 Out-of-frame Intra-chr 113052 ChimerSeq ChiTaRs ChiTaRs THRAP3-KIAA0319L THRAP3 chr1 36767216 KIAA0319L chr1 35902308 Exonic hg19 NA BQ332167 Out-of-frame Intra-chr p34.3 p34.3 113053 ChimerSeq ChiTaRs ChiTaRs GLI3-GLI3 GLI3 chr7 42035085 GLI3 chr7 42035846 Exonic hg19 NA DW437787 Out-of-frame Intra-chr p14.1 Transcription factor p14.1 Transcription factor 113054 ChimerSeq ChiTaRs ChiTaRs MAP4-MYO1B MAP4 chr3 47893160 MYO1B chr2 192257895 Exonic hg19 NA AI251787 Out-of-frame Inter-chr p21.31 q32.3 113055 ChimerSeq ChiTaRs ChiTaRs RHOQ-ALDH1L1 RHOQ chr2 46806967 ALDH1L1 chr3 125877247 Exonic hg19 NA BX500047 Out-of-frame Inter-chr p21 q21.3 113056 ChimerSeq ChiTaRs ChiTaRs NAAA-NAAA NAAA chr4 76838606 NAAA chr4 76838503 Exonic hg19 NA AK024677 Out-of-frame Intra-chr q21.1 q21.1 113057 ChimerSeq ChiTaRs ChiTaRs DTX3L-DTX3L DTX3L chr3 122289938 DTX3L chr3 122289941 Exonic hg19 NA BF916447 Out-of-frame Intra-chr q21.1 q21.1 113058 ChimerSeq ChiTaRs ChiTaRs LARP1-PAPPA LARP1 chr5 154195506 PAPPA chr9 118916083 Exonic hg19 NA U28727 Out-of-frame Inter-chr q33.2 q33.1 113059 ChimerSeq ChiTaRs ChiTaRs DUSP1-DUSP1 DUSP1 chr5 172196775 DUSP1 chr5 172197742 Exonic hg19 NA BM811197 Out-of-frame Intra-chr q35.1 Tumor suppressor gene q35.1 Tumor suppressor gene 113060 ChimerSeq ChiTaRs ChiTaRs PSPH-EFNB2 PSPH chr7 56078961 EFNB2 chr13 107163894 Exonic hg19 NA BE766917 Out-of-frame Inter-chr p11.2 q33.3 113061 ChimerSeq ChiTaRs ChiTaRs STAMBP-STAMBP STAMBP chr2 74087278 STAMBP chr2 74089370 Exonic hg19 NA BQ379887 In-Frame Intra-chr p13.1 p13.1 113062 ChimerSeq ChiTaRs ChiTaRs SAMD12-CAB39 SAMD12 chr8 119372760 CAB39 chr2 231684687 Exonic hg19 NA AA235967 Out-of-frame Inter-chr q24.12 q37.1 113063 ChimerSeq ChiTaRs ChiTaRs F13A1-F13A1 F13A1 chr6 6197522 F13A1 chr6 6174974 Exonic hg19 NA W26167 Out-of-frame Intra-chr p25.1 p25.1 113064 ChimerSeq ChiTaRs ChiTaRs SMYD5-PSMB7 SMYD5 chr2 73454351 PSMB7 chr9 127150948 Exonic hg19 NA AI638157 Out-of-frame Inter-chr p13.2 q33.3 113065 ChimerSeq ChiTaRs ChiTaRs SNTG2-CCDC88A SNTG2 chr2 1352674 CCDC88A chr2 55562168 Exonic hg19 NA BX493397 Out-of-frame Intra-chr p16.1 113066 ChimerSeq ChiTaRs ChiTaRs COPA-COPA COPA chr1 160303437 COPA chr1 160295379 Exonic hg19 NA AA470927 Out-of-frame Intra-chr q23.2 q23.2 113067 ChimerSeq ChiTaRs ChiTaRs CNTN4-LINC00341 CNTN4 chr3 2482127 LINC00341 chr14 95873734 Exonic hg19 NA BG928647 Out-of-frame Inter-chr p26.3 113068 ChimerSeq ChiTaRs ChiTaRs PRLR-PRLR PRLR chr5 35173496 PRLR chr5 35173486 Exonic hg19 NA CV407157 Out-of-frame Intra-chr p13.2 p13.2 113069 ChimerSeq ChiTaRs ChiTaRs TIA1-HSPA13 TIA1 chr2 70444115 HSPA13 chr21 15746130 Exonic hg19 NA T06637 Out-of-frame Inter-chr p13.3 q11.2 113070 ChimerSeq ChiTaRs ChiTaRs MTOR-SOCS4 MTOR chr1 11184534 SOCS4 chr14 55514896 Exonic hg19 NA BE380007 Out-of-frame Inter-chr p36.22 Oncogene q22.3 113071 ChimerSeq ChiTaRs ChiTaRs MAP4-MAP4 MAP4 chr3 47892515 MAP4 chr3 47892532 Exonic hg19 NA BM996847 Out-of-frame Intra-chr p21.31 p21.31 113072 ChimerSeq ChiTaRs ChiTaRs KIAA2018-KIAA2018 KIAA2018 chr3 113374061 KIAA2018 chr3 113373625 Exonic hg19 NA AA489427 Out-of-frame Intra-chr 113073 ChimerSeq ChiTaRs ChiTaRs ARHGAP12-ARHGAP12 ARHGAP12 chr10 32199492 ARHGAP12 chr10 32197098 Exonic hg19 NA BF329227 Out-of-frame Intra-chr p11.22 p11.22 113074 ChimerSeq ChiTaRs ChiTaRs CDYL-CDYL CDYL chr6 4892180 CDYL chr6 4892433 Exonic hg19 NA BQ368327 Out-of-frame Intra-chr p25.1 p25.1 113075 ChimerSeq ChiTaRs ChiTaRs RPS6KA2-TRA@ RPS6KA2 chr6 166915577 TRA@ chr14 22695149 Exonic hg19 NA X07049 Out-of-frame Inter-chr q27 Oncogene Tumor suppressor gene q11.2 113076 ChimerSeq ChiTaRs ChiTaRs NVL-RPL8 NVL chr1 224517862 RPL8 chr8 146015156 Exonic hg19 NA BQ681327 Out-of-frame Inter-chr q42.11 q24.3 113077 ChimerSeq ChiTaRs ChiTaRs KIAA0922-ZNF516 KIAA0922 chr4 154433563 ZNF516 chr18 74075162 Exonic hg19 NA AV732097 Out-of-frame Inter-chr q31.3 q23 Transcription factor 113078 ChimerSeq ChiTaRs ChiTaRs RAB14-RAB14 RAB14 chr9 123942949 RAB14 chr9 123942380 Exonic hg19 NA AA129347 Out-of-frame Intra-chr q33.2 q33.2 113079 ChimerSeq ChiTaRs ChiTaRs CHMP7-CHMP7 CHMP7 chr8 23112840 CHMP7 chr8 23118688 Exonic hg19 NA W26547 Out-of-frame Intra-chr p21.3 p21.3 113080 ChimerSeq ChiTaRs ChiTaRs COX6C-FURIN COX6C chr8 100899775 FURIN chr15 91425918 Exonic hg19 NA R59927 Out-of-frame Inter-chr q22.2 q26.1 113081 ChimerSeq ChiTaRs ChiTaRs MTMR9LP-EIF3I MTMR9LP chr1 32705863 EIF3I chr1 32694098 Exonic hg19 NA BC015407 Out-of-frame Intra-chr p35.2 p35.2 113082 ChimerSeq ChiTaRs ChiTaRs TMEM80-TMEM80 TMEM80 chr11 701188 TMEM80 chr11 697221 Exonic hg19 NA CV573317 Out-of-frame Intra-chr p15.5 p15.5 113083 ChimerSeq ChiTaRs ChiTaRs CTNNB1-FAR1 CTNNB1 chr3 41241162 FAR1 chr11 13743275 Exonic hg19 NA DA215427 Out-of-frame Inter-chr p22.1 Oncogene p15.3 113084 ChimerSeq ChiTaRs ChiTaRs LOC150622-HEATR8-TTC4 LOC150622 chr2 6109103 HEATR8-TTC4 chr1 55177718 Exonic hg19 NA AW889657 Out-of-frame Inter-chr 113085 ChimerSeq ChiTaRs ChiTaRs MCPH1-MCPH1 MCPH1 chr8 6367655 MCPH1 chr8 6367043 Exonic hg19 NA CV328737 Out-of-frame Intra-chr p23.1 Tumor suppressor gene p23.1 Tumor suppressor gene 113086 ChimerSeq ChiTaRs ChiTaRs SNCAIP-DNAJC10 SNCAIP chr5 121659053 DNAJC10 chr2 183584821 Exonic hg19 NA DB219427 Out-of-frame Inter-chr q23.2 q32.1 113087 ChimerSeq ChiTaRs ChiTaRs LOC389831-NFYC LOC389831 chr7 53731 NFYC chr1 41174938 Exonic hg19 NA BE179197 Out-of-frame Inter-chr p34.2 Transcription factor 113088 ChimerSeq ChiTaRs ChiTaRs GALNTL2-GALNTL2 GALNTL2 chr3 16265597 GALNTL2 chr3 16269775 Exonic hg19 NA AA055297 Out-of-frame Intra-chr 113089 ChimerSeq ChiTaRs ChiTaRs GALT-CENPF GALT chr9 34650571 CENPF chr1 214786559 Exonic hg19 NA BF593407 Out-of-frame Inter-chr p13.3 q41 113090 ChimerSeq ChiTaRs ChiTaRs SERPINE1-AP2S1 SERPINE1 chr7 100782395 AP2S1 chr19 47341719 Exonic hg19 NA BU181157 Out-of-frame Inter-chr q22.1 q13.32 113091 ChimerSeq ChiTaRs ChiTaRs AP4M1-TAF6 AP4M1 chr7 99707596 TAF6 chr7 99711837 Exonic hg19 NA BY798517 Out-of-frame Intra-chr q22.1 q22.1 113092 ChimerSeq ChiTaRs ChiTaRs ZHX1-C8orf76-MYLK-AS1 ZHX1-C8orf76 chr8 124266474 MYLK-AS1 chr3 123331143 Exonic hg19 NA AL833897 Out-of-frame Inter-chr q24.13 Transcription factor q21.1 113093 ChimerSeq ChiTaRs ChiTaRs UBE2F-C20orf194 UBE2F chr2 238912169 C20orf194 chr20 3276745 Exonic hg19 NA BF887817 Out-of-frame Inter-chr q37.3 p13 113094 ChimerSeq ChiTaRs ChiTaRs DAG1-DAG1 DAG1 chr3 49572296 DAG1 chr3 49572272 Exonic hg19 NA BM555687 Out-of-frame Intra-chr p21.31 p21.31 113095 ChimerSeq ChiTaRs ChiTaRs PART1-MALAT1 PART1 chr5 59784139 MALAT1 chr11 65266571 Exonic hg19 NA BF673537 Out-of-frame Inter-chr q12.1 q13.1 113096 ChimerSeq ChiTaRs ChiTaRs RNU5F-1-RNU5F-1 RNU5F-1 chr1 220170509 RNU5F-1 chr1 220170428 Exonic hg19 NA BG166277 Out-of-frame Intra-chr p34.1 p34.1 113097 ChimerSeq ChiTaRs ChiTaRs CLDN11-TSTD2 CLDN11 chr3 170150395 TSTD2 chr9 100364740 Exonic hg19 NA DA165167 Out-of-frame Inter-chr q26.2 q22.33 113098 ChimerSeq ChiTaRs ChiTaRs GNAT2-GNAT2 GNAT2 chr1 110155867 GNAT2 chr1 110154864 Exonic hg19 NA CD620137 Out-of-frame Intra-chr p13.3 p13.3 113099 ChimerSeq ChiTaRs ChiTaRs EMID2-EMID2 EMID2 chr7 101201865 EMID2 chr7 101201070 Exonic hg19 NA AA461137 Out-of-frame Intra-chr 113100 ChimerSeq ChiTaRs ChiTaRs ELK4-DNAJC5 ELK4 chr1 205589630 DNAJC5 chr20 62532466 Exonic hg19 NA AW372867 Out-of-frame Inter-chr q32.1 Transcription factor q13.33 113101 ChimerSeq ChiTaRs ChiTaRs EXOSC1-EXOSC1 EXOSC1 chr10 99195786 EXOSC1 chr10 99196384 Exonic hg19 NA BF361687 Out-of-frame Intra-chr q24.1 q24.1 113102 ChimerSeq ChiTaRs ChiTaRs CD74-PPM1M CD74 chr5 149781436 PPM1M chr3 52283595 Exonic hg19 NA BF875527 Out-of-frame Inter-chr q33.1 p21.2 113103 ChimerSeq ChiTaRs ChiTaRs NEFM-NOL4 NEFM chr8 24776606 NOL4 chr18 31655782 Exonic hg19 NA BX489207 3'UTR-3'UTR Inter-chr p21.2 q12.1 113104 ChimerSeq ChiTaRs ChiTaRs ARID1B-SESTD1 ARID1B chr6 157108066 SESTD1 chr2 179977494 Exonic hg19 NA AW952707 Out-of-frame Inter-chr q25.3 Oncogene q31.2 113105 ChimerSeq ChiTaRs ChiTaRs FLNA-ARID5B FLNA chrX 153590692 ARID5B chr10 63852983 Exonic hg19 NA BQ329407 Out-of-frame Inter-chr q28 Tumor suppressor gene q21.2 Transcription factor 113106 ChimerSeq ChiTaRs ChiTaRs IGFBP7-HYAL2 IGFBP7 chr4 57939632 HYAL2 chr3 50355278 Exonic hg19 NA BF853827 Out-of-frame Inter-chr q12 Tumor suppressor gene p21.31 113107 ChimerSeq ChiTaRs ChiTaRs UCHL5-HDAC2 UCHL5 chr1 192984361 HDAC2 chr6 114266544 Exonic hg19 NA F07807 Out-of-frame Inter-chr q31.2 q21 113108 ChimerSeq ChiTaRs ChiTaRs PTPRD-PTPRD PTPRD chr9 8614200 PTPRD chr9 8612544 Exonic hg19 NA DB302177 Out-of-frame Intra-chr Oncogene Tumor suppressor gene Oncogene Tumor suppressor gene 113109 ChimerSeq ChiTaRs ChiTaRs NUP210-FBXO4 NUP210 chr3 13392920 FBXO4 chr5 41926160 Exonic hg19 NA BF331537 Out-of-frame Inter-chr p25.1 p13.1 113110 ChimerSeq ChiTaRs ChiTaRs EFNA5-FGD4 EFNA5 chr5 106816902 FGD4 chr12 32639398 Exonic hg19 NA BE001767 Out-of-frame Inter-chr q21.3 Tumor suppressor gene p11.21 113111 ChimerSeq ChiTaRs ChiTaRs SYT7-WIPF2 SYT7 chr11 61310063 WIPF2 chr17 38435503 Exonic hg19 NA DA107627 Out-of-frame Inter-chr q12.2 q21.2 113112 ChimerSeq ChiTaRs ChiTaRs SLC24A2-SPIDR SLC24A2 chr9 19508673 SPIDR chr8 48649475 Exonic hg19 NA AV723197 Out-of-frame Inter-chr p22.1 q11.21 113113 ChimerSeq ChiTaRs ChiTaRs IFT80-TP73 IFT80 chr3 160126797 TP73 chr1 3579749 Exonic hg19 NA BX280087 Out-of-frame Inter-chr q25.33 p36.32 Tumor suppressor gene Transcription factor 113114 ChimerSeq ChiTaRs ChiTaRs SPDYA-SPDYA SPDYA chr2 29026797 SPDYA chr2 29027868 Exonic hg19 NA CV358747 Out-of-frame Intra-chr p23.2 p23.2 113115 ChimerSeq ChiTaRs ChiTaRs MTF1-MTF1 MTF1 chr1 38279773 MTF1 chr1 38276456 Exonic hg19 NA N22957 Out-of-frame Intra-chr p34.3 Transcription factor p34.3 Transcription factor 113116 ChimerSeq ChiTaRs ChiTaRs CTPS2-SEC31A CTPS2 chrX 16672693 SEC31A chr4 83803618 Exonic hg19 NA BF839137 Out-of-frame Inter-chr p22.2 q21.22 113117 ChimerSeq ChiTaRs ChiTaRs RASAL2-SARDH RASAL2 chr1 178443270 SARDH chr9 136559458 Exonic hg19 NA DA839467 Out-of-frame Inter-chr q25.2 Tumor suppressor gene q34.2 113118 ChimerSeq ChiTaRs ChiTaRs QARS-QARS QARS chr3 49137674 QARS chr3 49137690 Exonic hg19 NA BQ330017 Out-of-frame Intra-chr p21.31 p21.31 113119 ChimerSeq ChiTaRs ChiTaRs STARD3NL-STARD3NL STARD3NL chr7 38269725 STARD3NL chr7 38269769 Exonic hg19 NA AI348377 Out-of-frame Intra-chr p14.1 p14.1 113120 ChimerSeq ChiTaRs ChiTaRs HSPB1-WASF1 HSPB1 chr7 75933603 WASF1 chr6 110423249 Exonic hg19 NA BU631277 Out-of-frame Inter-chr q11.23 q21 113121 ChimerSeq ChiTaRs ChiTaRs MMGT1-MMGT1 MMGT1 chrX 135046639 MMGT1 chrX 135045944 Exonic hg19 NA BM462257 Out-of-frame Intra-chr q26.3 q26.3 113122 ChimerSeq ChiTaRs ChiTaRs AGXT2L2-ARNTL AGXT2L2 chr5 177648249 ARNTL chr11 13363241 Exonic hg19 NA DB346797 Out-of-frame Inter-chr p15.3 Tumor suppressor gene Transcription factor 113123 ChimerSeq ChiTaRs ChiTaRs CTNNA2-CTNNA2 CTNNA2 chr2 80773185 CTNNA2 chr2 80782987 Exonic hg19 NA BE504037 Out-of-frame Intra-chr p12 Tumor suppressor gene p12 Tumor suppressor gene 113124 ChimerSeq ChiTaRs ChiTaRs EIF2C4-EIF2C4 EIF2C4 chr1 36315809 EIF2C4 chr1 36301459 Exonic hg19 NA BF366897 Out-of-frame Intra-chr 113125 ChimerSeq ChiTaRs ChiTaRs PPEF1-PPEF1 PPEF1 chrX 18725759 PPEF1 chrX 18725760 Exonic hg19 NA AF027977 Out-of-frame Intra-chr p22.13 p22.13 113126 ChimerSeq ChiTaRs ChiTaRs GPD1L-UBE2G1 GPD1L chr3 32210156 UBE2G1 chr17 4268209 Exonic hg19 NA BF849097 Out-of-frame Inter-chr p22.3 p13.2 113127 ChimerSeq ChiTaRs ChiTaRs VCP-VCP VCP chr9 35059677 VCP chr9 35059663 Exonic hg19 NA AI907427 Out-of-frame Intra-chr p13.3 p13.3 113128 ChimerSeq ChiTaRs ChiTaRs PPP1R18-PPP1R18 PPP1R18 chr6 2036079 PPP1R18 chr6 1946856 Exonic hg19 NA CF125787 Out-of-frame Intra-chr p21.33 p21.33 113129 ChimerSeq ChiTaRs ChiTaRs MEMO1-KIAA0391 MEMO1 chr2 32253647 KIAA0391 chr14 35747625 Exonic hg19 NA BI772797 Out-of-frame Inter-chr p22.3 q13.2 113130 ChimerSeq ChiTaRs ChiTaRs FBXO32-AGGF1 FBXO32 chr8 124512317 AGGF1 chr5 76355456 Exonic hg19 NA Z28907 Out-of-frame Inter-chr q24.13 Tumor suppressor gene q13.3 113131 ChimerSeq ChiTaRs ChiTaRs SSRP1-FADS2 SSRP1 chr11 57093724 FADS2 chr11 61605334 Exonic hg19 NA CX787277 Out-of-frame Intra-chr q12.1 q12.2 113132 ChimerSeq ChiTaRs ChiTaRs APH1A-APH1A APH1A chr1 150238336 APH1A chr1 150238457 Exonic hg19 NA BG982667 Out-of-frame Intra-chr q21.2 q21.2 113133 ChimerSeq ChiTaRs ChiTaRs FGG-SLC47A1 FGG chr4 155527904 SLC47A1 chr17 19480676 Exonic hg19 NA AV655197 Out-of-frame Inter-chr q32.1 p11.2 113134 ChimerSeq ChiTaRs ChiTaRs SPATS1-SLC25A12 SPATS1 chr6 44276941 SLC25A12 chr2 172650608 Exonic hg19 NA BF947427 Out-of-frame Inter-chr p21.1 q31.1 113135 ChimerSeq ChiTaRs ChiTaRs LIPA-FUT10 LIPA chr10 91066813 FUT10 chr8 33229164 Exonic hg19 NA BE763407 Out-of-frame Inter-chr q23.31 p12 113136 ChimerSeq ChiTaRs ChiTaRs SEC63-CELSR3 SEC63 chr6 108277314 CELSR3 chr3 48663170 Exonic hg19 NA AI471307 Out-of-frame Inter-chr q21 p21.31 113137 ChimerSeq ChiTaRs ChiTaRs PPP1R10-PPP1R10 PPP1R10 chr6 1902298 PPP1R10 chr6 1901386 Exonic hg19 NA BF315707 Out-of-frame Intra-chr 113138 ChimerSeq ChiTaRs ChiTaRs UMPS-EVC UMPS chr3 124463140 EVC chr4 5784294 Exonic hg19 NA AW800517 Out-of-frame Inter-chr q21.2 p16.2 113139 ChimerSeq ChiTaRs ChiTaRs SNHG3-GNB1 SNHG3 chr1 28834672 GNB1 chr1 1735996 Exonic hg19 NA DA645137 5'UTR-CDS Intra-chr p35.3 p36.33 113140 ChimerSeq ChiTaRs ChiTaRs ICA1-ICA1 ICA1 chr7 8158797 ICA1 chr7 8272310 Exonic hg19 NA AU252467 Out-of-frame Intra-chr p21.3 p21.3 113141 ChimerSeq ChiTaRs ChiTaRs TMEM131-TMEM131 TMEM131 chr2 98373171 TMEM131 chr2 98373369 Exonic hg19 NA AW629417 Out-of-frame Intra-chr q11.2 q11.2 113142 ChimerSeq ChiTaRs ChiTaRs SKP1-GAPDH SKP1 chr5 133497575 GAPDH chr12 6646910 Exonic hg19 NA CV312017 Out-of-frame Inter-chr q31.1 p13.31 113143 ChimerSeq ChiTaRs ChiTaRs LSAMP-LSAMP LSAMP chr3 115527614 LSAMP chr3 115527616 Exonic hg19 NA BE770467 Out-of-frame Intra-chr q13.31 Tumor suppressor gene q13.31 Tumor suppressor gene 113144 ChimerSeq ChiTaRs ChiTaRs FSTL1-ARL8B FSTL1 chr3 120169819 ARL8B chr3 5215728 Exonic hg19 NA D89937 Out-of-frame Intra-chr q13.33 p26.1 113145 ChimerSeq ChiTaRs ChiTaRs ARL15-GPI ARL15 chr5 53580292 GPI chr19 34884819 Exonic hg19 NA BQ316137 Out-of-frame Inter-chr q11.2 113146 ChimerSeq ChiTaRs ChiTaRs EGFLAM-EGFLAM EGFLAM chr5 38465123 EGFLAM chr5 38464757 Exonic hg19 NA AL048127 Out-of-frame Intra-chr p13.2 p13.2 113147 ChimerSeq ChiTaRs ChiTaRs AGAP3-HOXD11 AGAP3 chr7 150783772 HOXD11 chr2 176972314 Exonic hg19 NA BM807507 Out-of-frame Inter-chr q36.1 q31.1 Transcription factor 113148 ChimerSeq ChiTaRs ChiTaRs RIF1-RIF1 RIF1 chr2 152357908 RIF1 chr2 152352460 Exonic hg19 NA AW937387 Out-of-frame Intra-chr q23.3 q23.3 113149 ChimerSeq ChiTaRs ChiTaRs UQCRH-PIK3R3 UQCRH chr1 46775989 PIK3R3 chr1 46519492 Exonic hg19 NA BE515277 Out-of-frame Intra-chr p33 p34.1 113150 ChimerSeq ChiTaRs ChiTaRs MAGI2-AS3-TCERG1 MAGI2-AS3 chr7 79090020 TCERG1 chr5 145890019 Exonic hg19 NA BQ356267 Out-of-frame Inter-chr q21.11 q32 Tumor suppressor gene 113151 ChimerSeq ChiTaRs ChiTaRs AGBL5-LAMB2P1 AGBL5 chr2 27282402 LAMB2P1 chr3 49191189 Exonic hg19 NA AI825607 Out-of-frame Inter-chr p23.3 113152 ChimerSeq ChiTaRs ChiTaRs EIF4G2-YWHAG EIF4G2 chr11 10822384 YWHAG chr7 75958531 Exonic hg19 NA AW889737 Out-of-frame Inter-chr p15.4 q11.23 113153 ChimerSeq ChiTaRs ChiTaRs RNF168-RNF168 RNF168 chr3 196200811 RNF168 chr3 196200828 Exonic hg19 NA AA502677 Out-of-frame Intra-chr q29 q29 113154 ChimerSeq ChiTaRs ChiTaRs CREB3L1-ASPH CREB3L1 chr11 46342643 ASPH chr8 62492380 Exonic hg19 NA BC014097 Out-of-frame Inter-chr p11.2 Tumor suppressor gene Transcription factor q12.3 113155 ChimerSeq ChiTaRs ChiTaRs FRAT1-FRAT1 FRAT1 chr10 99081672 FRAT1 chr10 99081283 Exonic hg19 NA CA313947 3'UTR-CDS Intra-chr q24.1 q24.1 113156 ChimerSeq ChiTaRs ChiTaRs C6orf1-H1F0 C6orf1 chr6 34214474 H1F0 chr22 38201689 Exonic hg19 NA CD364437 Out-of-frame Inter-chr q13.1 113157 ChimerSeq ChiTaRs ChiTaRs GATAD2B-USP7 GATAD2B chr1 153790568 USP7 chr16 9022365 Exonic hg19 NA BG979147 Out-of-frame Inter-chr Transcription factor p13.2 113158 ChimerSeq ChiTaRs ChiTaRs VPS54-ANKHD1 VPS54 chr2 64149093 ANKHD1 chr5 139865905 Exonic hg19 NA BF681377 Out-of-frame Inter-chr p14 q31.3 113159 ChimerSeq ChiTaRs ChiTaRs SLC4A5-SLC4A5 SLC4A5 chr2 74590458 SLC4A5 chr2 74588699 Exonic hg19 NA AA713537 Out-of-frame Intra-chr p13.1 p13.1 113160 ChimerSeq ChiTaRs ChiTaRs ZIC1-AKT2 ZIC1 chr3 147132418 AKT2 chr19 40761073 Exonic hg19 NA DA742787 Out-of-frame Inter-chr q24 Tumor suppressor gene Transcription factor q13.2 AGC:Akt Oncogene 113161 ChimerSeq ChiTaRs ChiTaRs R3HDM1-R3HDM1 R3HDM1 chr2 136437882 R3HDM1 chr2 136409331 Exonic hg19 NA BF839117 Out-of-frame Intra-chr q21.3 q21.3 113162 ChimerSeq ChiTaRs ChiTaRs AUTS2-RRAGA AUTS2 chr7 69107043 RRAGA chr9 19050562 Exonic hg19 NA CK431057 Out-of-frame Inter-chr q11.22 p22.1 113163 ChimerSeq ChiTaRs ChiTaRs HDGF-HDGF HDGF chr1 156712013 HDGF chr1 156712339 Exonic hg19 NA AA291597 Out-of-frame Intra-chr q23.1 q23.1 113164 ChimerSeq ChiTaRs ChiTaRs FXN-FXN FXN chr9 71691727 FXN chr9 71688985 Exonic hg19 NA BM790417 Out-of-frame Intra-chr q21.11 Tumor suppressor gene q21.11 Tumor suppressor gene 113165 ChimerSeq ChiTaRs ChiTaRs YKT6-YKT6 YKT6 chr7 44252928 YKT6 chr7 44252791 Exonic hg19 NA AW176577 Out-of-frame Intra-chr p13 p13 113166 ChimerSeq ChiTaRs ChiTaRs ARL15-ARL15 ARL15 chr5 53289935 ARL15 chr5 53289573 Exonic hg19 NA CV370307 Out-of-frame Intra-chr q11.2 q11.2 113167 ChimerSeq ChiTaRs ChiTaRs CSDE1-CSDE1 CSDE1 chr1 115260289 CSDE1 chr1 115260458 Exonic hg19 NA BF752097 Out-of-frame Intra-chr p13.2 p13.2 113168 ChimerSeq ChiTaRs ChiTaRs RNU5F-1-RNU5F-1 RNU5F-1 chr1 220162069 RNU5F-1 chr1 220156576 Exonic hg19 NA AI653367 Out-of-frame Intra-chr p34.1 p34.1 113169 ChimerSeq ChiTaRs ChiTaRs SNED1-SNED1 SNED1 chr2 241993377 SNED1 chr2 241976668 Exonic hg19 NA BQ380107 Out-of-frame Intra-chr q37.3 q37.3 113170 ChimerSeq ChiTaRs ChiTaRs C11orf96-CRLF3 C11orf96 chr11 43964667 CRLF3 chr17 29119326 Exonic hg19 NA BE503147 Out-of-frame Inter-chr p11.2 q11.2 113171 ChimerSeq ChiTaRs ChiTaRs TUBB4B-TUBB4B TUBB4B chr9 140137092 TUBB4B chr9 140137109 Exonic hg19 NA BQ361837 Out-of-frame Intra-chr q34.3 q34.3 113172 ChimerSeq ChiTaRs ChiTaRs SLC38A3-SLC38A3 SLC38A3 chr3 50257549 SLC38A3 chr3 50252988 Exonic hg19 NA BQ638957 Out-of-frame Intra-chr p21.31 p21.31 113173 ChimerSeq ChiTaRs ChiTaRs CCDC112-FN1 CCDC112 chr5 114612742 FN1 chr2 216226054 Exonic hg19 NA CA418157 Out-of-frame Inter-chr q22.3 q35 Oncogene 113174 ChimerSeq ChiTaRs ChiTaRs KLF3-HBG1 KLF3 chr4 38677218 HBG1 chr11 5274420 Exonic hg19 NA AF116717 Out-of-frame Inter-chr p14 Transcription factor p15.4 113175 ChimerSeq ChiTaRs ChiTaRs CALU-CALU CALU chr7 128410586 CALU chr7 128410922 Exonic hg19 NA BE140637 Out-of-frame Intra-chr q32.1 q32.1 113176 ChimerSeq ChiTaRs ChiTaRs ARAF-ARAF ARAF chrX 47430981 ARAF chrX 47429016 Exonic hg19 NA BE068877 Out-of-frame Intra-chr p11.3 TKL:RAF Oncogene p11.3 TKL:RAF Oncogene 113177 ChimerSeq ChiTaRs ChiTaRs NSMCE2-NSMCE2 NSMCE2 chr8 126353642 NSMCE2 chr8 126353835 Exonic hg19 NA AA746867 Out-of-frame Intra-chr q24.13 q24.13 113178 ChimerSeq ChiTaRs ChiTaRs ASXL2-ASXL2 ASXL2 chr2 25964343 ASXL2 chr2 25966215 Exonic hg19 NA AA234387 Out-of-frame Intra-chr p23.3 p23.3 113179 ChimerSeq ChiTaRs ChiTaRs DDX21-SULF2 DDX21 chr10 70725242 SULF2 chr20 46301734 Exonic hg19 NA BG981127 Out-of-frame Inter-chr q22.1 q13.12 113180 ChimerSeq ChiTaRs ChiTaRs AMOTL2-AMOTL2 AMOTL2 chr3 134075883 AMOTL2 chr3 134075941 Exonic hg19 NA AA461237 Out-of-frame Intra-chr q22.2 q22.2 113181 ChimerSeq ChiTaRs ChiTaRs HNRPDL-HNRPDL HNRPDL chr4 83349587 HNRPDL chr4 83350455 Exonic hg19 NA X52767 Out-of-frame Intra-chr 113182 ChimerSeq ChiTaRs ChiTaRs MAF1-SURF4 MAF1 chr8 145162514 SURF4 chr9 136228884 Exonic hg19 NA AW241177 Out-of-frame Inter-chr q24.3 113183 ChimerSeq ChiTaRs ChiTaRs GRM8-KCNQ5 GRM8 chr7 126717987 KCNQ5 chr6 73356962 Exonic hg19 NA AI267717 Out-of-frame Inter-chr q31.33 Oncogene q13 113184 ChimerSeq ChiTaRs ChiTaRs IPO11-RFFL IPO11 chr5 61836556 RFFL chr17 33336895 Exonic hg19 NA BU507077 Out-of-frame Inter-chr q12.1 q12 113185 ChimerSeq ChiTaRs ChiTaRs LEMD2-MALAT1 LEMD2 chr6 33747942 MALAT1 chr11 65268151 Exonic hg19 NA BI038767 Out-of-frame Inter-chr p21.31 q13.1 113186 ChimerSeq ChiTaRs ChiTaRs ZBTB8B-XYLT1 ZBTB8B chr1 32931800 XYLT1 chr16 17272118 Exonic hg19 NA AV730447 Out-of-frame Inter-chr p35.1 Transcription factor p12.3 113187 ChimerSeq ChiTaRs ChiTaRs BMS1-NUCKS1 BMS1 chr10 43292639 NUCKS1 chr1 205683792 Exonic hg19 NA BP367197 Out-of-frame Inter-chr q11.21 q32.1 113188 ChimerSeq ChiTaRs ChiTaRs HOOK3-HOOK3 HOOK3 chr8 42877245 HOOK3 chr8 42877896 Exonic hg19 NA AW298467 Out-of-frame Intra-chr p11.21 Oncogene p11.21 Oncogene 113189 ChimerSeq ChiTaRs ChiTaRs DNALI1-ING4 DNALI1 chr1 38023295 ING4 chr12 6759785 Exonic hg19 NA BG012707 Out-of-frame Inter-chr p34.3 p13.31 Oncogene Tumor suppressor gene 113190 ChimerSeq ChiTaRs ChiTaRs SSB-SSB SSB chr2 170665064 SSB chr2 170663551 Exonic hg19 NA BM968087 Out-of-frame Intra-chr q31.1 q31.1 113191 ChimerSeq ChiTaRs ChiTaRs RTN4-RTN4 RTN4 chr2 55201877 RTN4 chr2 55199987 Exonic hg19 NA AA180827 Out-of-frame Intra-chr p16.1 Tumor suppressor gene p16.1 Tumor suppressor gene 113192 ChimerSeq ChiTaRs ChiTaRs DNAJB11-DNAJB11 DNAJB11 chr3 186303311 DNAJB11 chr3 186299260 Exonic hg19 NA AW999687 Out-of-frame Intra-chr q27.3 q27.3 113193 ChimerSeq ChiTaRs ChiTaRs ARHGEF37-ARHGEF37 ARHGEF37 chr5 149012082 ARHGEF37 chr5 149011615 Exonic hg19 NA AW975097 Out-of-frame Intra-chr q32 q32 113194 ChimerSeq ChiTaRs ChiTaRs SOX6-BCYRN1 SOX6 chr11 16368445 BCYRN1 chrX 70518318 Exonic hg19 NA BE765997 Out-of-frame Inter-chr p15.2 Transcription factor p21 113195 ChimerSeq ChiTaRs ChiTaRs FAIM3-TMEM87A FAIM3 chr1 207086860 TMEM87A chr15 42531870 Exonic hg19 NA DA732797 Out-of-frame Inter-chr q15.1 113196 ChimerSeq ChiTaRs ChiTaRs TOPORS-TOPORS TOPORS chr9 32541965 TOPORS chr9 32541975 Exonic hg19 NA CB241307 Out-of-frame Intra-chr p21.1 Tumor suppressor gene Transcription factor p21.1 Tumor suppressor gene Transcription factor 113197 ChimerSeq ChiTaRs ChiTaRs BDP1-BDP1 BDP1 chr5 70807178 BDP1 chr5 70787755 Exonic hg19 NA AB033067 Out-of-frame Intra-chr 113198 ChimerSeq ChiTaRs ChiTaRs SORBS3-SEPT4 SORBS3 chr8 22432376 2004_ 9_ 1_ chr17 56604145 Exonic hg19 NA BF954617 Out-of-frame Inter-chr p21.3 Tumor suppressor gene 113199 ChimerSeq ChiTaRs ChiTaRs SNX9-PIP5K1C SNX9 chr6 158360718 PIP5K1C chr19 3675292 Exonic hg19 NA BF989347 Out-of-frame Inter-chr q25.3 p13.3 113200 ChimerSeq ChiTaRs ChiTaRs SFPQ-TBRG4 SFPQ chr1 35658746 TBRG4 chr7 45148475 Exonic hg19 NA BM147067 Out-of-frame Inter-chr p34.3 p13 113201 ChimerSeq ChiTaRs ChiTaRs MBD5-MIA3 MBD5 chr2 148796499 MIA3 chr1 222819160 Exonic hg19 NA BF770897 Out-of-frame Inter-chr q23.1 q41 113202 ChimerSeq ChiTaRs ChiTaRs USMG5-BAIAP2 USMG5 chr10 105152225 BAIAP2 chr17 79009023 Exonic hg19 NA BE837027 Out-of-frame Inter-chr q24.33 q25.3 113203 ChimerSeq ChiTaRs ChiTaRs LGALS8-WAC LGALS8 chr1 236714989 WAC chr10 28897113 Exonic hg19 NA BE082917 Out-of-frame Inter-chr q43 p12.1 113204 ChimerSeq ChiTaRs ChiTaRs PNO1-ITPKB PNO1 chr2 68403089 ITPKB chr1 226851529 Exonic hg19 NA DB347287 Out-of-frame Inter-chr p14 q42.12 113205 ChimerSeq ChiTaRs ChiTaRs AUTS2-TRIM3 AUTS2 chr7 69636794 TRIM3 chr11 6479412 Exonic hg19 NA DA101147 Out-of-frame Inter-chr q11.22 p15.4 Tumor suppressor gene 113206 ChimerSeq ChiTaRs ChiTaRs IQCG-DOCK7 IQCG chr3 197682678 DOCK7 chr1 62976292 Exonic hg19 NA CA775747 Out-of-frame Inter-chr q29 p31.3 113207 ChimerSeq ChiTaRs ChiTaRs VCP-VCP VCP chr9 35057204 VCP chr9 35056904 Exonic hg19 NA BQ219507 Out-of-frame Intra-chr p13.3 p13.3 113208 ChimerSeq ChiTaRs ChiTaRs ACP6-PRIM2 ACP6 chr1 147119602 PRIM2 chr6 57343288 Exonic hg19 NA BQ345327 Out-of-frame Inter-chr q21.2 p11.2 113209 ChimerSeq ChiTaRs ChiTaRs ARF1-DCAF5 ARF1 chr1 228286910 DCAF5 chr14 69518853 Exonic hg19 NA W94277 Out-of-frame Inter-chr q42.13 Tumor suppressor gene q24.1 113210 ChimerSeq ChiTaRs ChiTaRs CNKSR1-CNKSR1 CNKSR1 chr1 26516209 CNKSR1 chr1 26515808 Exonic hg19 NA AW935017 Out-of-frame Intra-chr p36.11 p36.11 113211 ChimerSeq ChiTaRs ChiTaRs EMID2-SNX12 EMID2 chr7 101107090 SNX12 chrX 70222024 Exonic hg19 NA BF994737 Out-of-frame Inter-chr q13.1 113212 ChimerSeq ChiTaRs ChiTaRs DUSP5-S100A6 DUSP5 chr10 112259117 S100A6 chr1 153507780 Exonic hg19 NA BE934767 Out-of-frame Inter-chr q25.2 Tumor suppressor gene q21.3 113213 ChimerSeq ChiTaRs ChiTaRs FOXN2-THAP4 FOXN2 chr2 48547192 THAP4 chr2 242527483 Exonic hg19 NA AW449137 Out-of-frame Intra-chr p16.3 Transcription factor q37.3 Transcription factor 113214 ChimerSeq ChiTaRs ChiTaRs NCK2-DDI2 NCK2 chr2 106429170 DDI2 chr1 15964848 Exonic hg19 NA BF333117 Out-of-frame Inter-chr q12.2 p36.21 113215 ChimerSeq ChiTaRs ChiTaRs CENPF-HS2ST1 CENPF chr1 214825155 HS2ST1 chr1 87613124 Exonic hg19 NA BE156347 Out-of-frame Intra-chr q41 p22.3 113216 ChimerSeq ChiTaRs ChiTaRs FLJ23867-FLJ23867 FLJ23867 chr1 180168631 FLJ23867 chr1 180168883 Exonic hg19 NA AW857957 Out-of-frame Intra-chr 113217 ChimerSeq ChiTaRs ChiTaRs UBE2E1-RABGAP1L UBE2E1 chr3 23900271 RABGAP1L chr1 174784775 Exonic hg19 NA BF364487 Out-of-frame Inter-chr p24.2 q25.1 113218 ChimerSeq ChiTaRs ChiTaRs MKI67IP-SHOX MKI67IP chr2 122493423 SHOX chrY 542246 Exonic hg19 NA AK027097 Out-of-frame Inter-chr p22.33 Transcription factor 113219 ChimerSeq ChiTaRs ChiTaRs CADM2-FARP1 CADM2 chr3 86119209 FARP1 chr13 99087889 Exonic hg19 NA AU118057 Out-of-frame Inter-chr p12.1 Tumor suppressor gene q32.2 113220 ChimerSeq ChiTaRs ChiTaRs PTK2-SMAP2 PTK2 chr8 141668676 SMAP2 chr1 40888081 Exonic hg19 NA BE439387 Out-of-frame Inter-chr q24.3 p34.2 113221 ChimerSeq ChiTaRs ChiTaRs RAB7A-SAMD12 RAB7A chr3 128532375 SAMD12 chr8 119361688 Exonic hg19 NA BF759737 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q24.12 113222 ChimerSeq ChiTaRs ChiTaRs SF3B14-SF3B14 SF3B14 chr2 24290699 SF3B14 chr2 24290685 Exonic hg19 NA CB322057 Out-of-frame Intra-chr 113223 ChimerSeq ChiTaRs ChiTaRs FUBP3-FUBP3 FUBP3 chr9 133513638 FUBP3 chr9 133513612 Exonic hg19 NA BM801017 Out-of-frame Intra-chr q34.11 q34.11 113224 ChimerSeq ChiTaRs ChiTaRs CD74-SOD2 CD74 chr5 149781401 SOD2 chr6 160106026 Exonic hg19 NA AA934677 Out-of-frame Inter-chr q33.1 q25.3 Tumor suppressor gene 113225 ChimerSeq ChiTaRs ChiTaRs CD247-ANO5 CD247 chr1 167453034 ANO5 chr11 22249030 Exonic hg19 NA M78967 Out-of-frame Inter-chr q24.2 p14.3 113226 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-PLCB2 INS-IGF2 chr11 2150546 PLCB2 chr15 40593197 Exonic hg19 NA N69137 Out-of-frame Inter-chr p15.5 q15.1 Oncogene 113227 ChimerSeq ChiTaRs ChiTaRs TP73-AS1-RABGEF1 TP73-AS1 chr1 3663902 RABGEF1 chr7 66244457 Exonic hg19 NA BC062467 Out-of-frame Inter-chr p36.32 Tumor suppressor gene Transcription factor q11.21 Tumor suppressor gene 113228 ChimerSeq ChiTaRs ChiTaRs SETD7-SETD7 SETD7 chr4 140452820 SETD7 chr4 140452774 Exonic hg19 NA AA552767 Out-of-frame Intra-chr q31.1 q31.1 113229 ChimerSeq ChiTaRs ChiTaRs PLOD3-SLC9A1 PLOD3 chr7 100853900 SLC9A1 chr1 27434292 Exonic hg19 NA BQ369217 Out-of-frame Inter-chr q22.1 p36.11 113230 ChimerSeq ChiTaRs ChiTaRs CLCN4-CLCN4 CLCN4 chrX 10205476 CLCN4 chrX 10205198 Exonic hg19 NA AW900067 Out-of-frame Intra-chr p22.2 p22.2 113231 ChimerSeq ChiTaRs ChiTaRs FYCO1-TLN1 FYCO1 chr3 45962929 TLN1 chr9 35717321 Exonic hg19 NA BI023087 Out-of-frame Inter-chr p21.31 p13.3 113232 ChimerSeq ChiTaRs ChiTaRs ADCY2-SH3BGRL3 ADCY2 chr1 152009422 SH3BGRL3 chr1 26606586 Exonic hg19 NA BQ896787 Out-of-frame Intra-chr p15.31 p36.11 113233 ChimerSeq ChiTaRs ChiTaRs HLA-DRA-PPIG HLA-DRA chr6 3759319 PPIG chr2 170493145 Exonic hg19 NA BE177297 Out-of-frame Inter-chr q31.1 113234 ChimerSeq ChiTaRs ChiTaRs ZYX-NCAPH ZYX chr7 143088201 NCAPH chr2 97019987 Exonic hg19 NA AI193067 Out-of-frame Inter-chr q34 Tumor suppressor gene q11.2 113235 ChimerSeq ChiTaRs ChiTaRs PEX1-PEX1 PEX1 chr7 92140301 PEX1 chr7 92126027 Exonic hg19 NA N22627 Out-of-frame Intra-chr q21.2 q21.2 113236 ChimerSeq ChiTaRs ChiTaRs JMJD1C-ANKH JMJD1C chr10 65028687 ANKH chr5 14755971 Exonic hg19 NA DA252327 Out-of-frame Inter-chr q21.3 p15.2 113237 ChimerSeq ChiTaRs ChiTaRs CLCN3-CLCN3 CLCN3 chr4 170642963 CLCN3 chr4 170642696 Exonic hg19 NA AA525427 Out-of-frame Intra-chr q33 q33 113238 ChimerSeq ChiTaRs ChiTaRs CCNT2-MTUS1 CCNT2 chr2 135697537 MTUS1 chr8 17527797 Exonic hg19 NA BF828107 Out-of-frame Inter-chr q21.3 p22 Tumor suppressor gene 113239 ChimerSeq ChiTaRs ChiTaRs ENO1-ENO1 ENO1 chr1 8921478 ENO1 chr1 8921064 Exonic hg19 NA BG036247 Out-of-frame Intra-chr p36.23 p36.23 113240 ChimerSeq ChiTaRs ChiTaRs KIAA1429-SLC12A8 KIAA1429 chr8 95530042 SLC12A8 chr3 124947525 Exonic hg19 NA CD244247 Out-of-frame Inter-chr q22.1 q21.2 113241 ChimerSeq ChiTaRs ChiTaRs AHI1-AHI1 AHI1 chr6 135605233 AHI1 chr6 135605266 Exonic hg19 NA CN478957 Out-of-frame Intra-chr q23.3 q23.3 113242 ChimerSeq ChiTaRs ChiTaRs OCIAD1-SH3GLB2 OCIAD1 chr4 48862220 SH3GLB2 chr9 131783369 Exonic hg19 NA AI018597 3'UTR-CDS Inter-chr p11 q34.11 113243 ChimerSeq ChiTaRs ChiTaRs RAD54L2-PTPRS RAD54L2 chr3 51667968 PTPRS chr19 5214665 Exonic hg19 NA BI046547 Out-of-frame Inter-chr p21.2 p13.3 113244 ChimerSeq ChiTaRs ChiTaRs HLA-H-TTC29 HLA-H chr6 29952494 TTC29 chr4 147661868 Exonic hg19 NA BE068017 Out-of-frame Inter-chr q31.22 113245 ChimerSeq ChiTaRs ChiTaRs COL27A1-COL27A1 COL27A1 chr9 116975632 COL27A1 chr9 116977121 Exonic hg19 NA AF216077 Out-of-frame Intra-chr q32 q32 113246 ChimerSeq ChiTaRs ChiTaRs RBPJ-RBPJ RBPJ chr4 26432824 RBPJ chr4 26432364 Exonic hg19 NA BM994447 Out-of-frame Intra-chr p15.2 Transcription factor p15.2 Transcription factor 113247 ChimerSeq ChiTaRs ChiTaRs PTPRN-PTPRN PTPRN chr2 220154980 PTPRN chr2 220164853 Exonic hg19 NA BP309887 Out-of-frame Intra-chr q35 q35 113248 ChimerSeq ChiTaRs ChiTaRs KIAA0408-KIAA0408 KIAA0408 chr6 127775232 KIAA0408 chr6 127775008 Exonic hg19 NA DR978197 Out-of-frame Intra-chr q22.33 q22.33 113249 ChimerSeq ChiTaRs ChiTaRs AVL9-AVL9 AVL9 chr7 32628321 AVL9 chr7 32627743 Exonic hg19 NA CA314537 Out-of-frame Intra-chr p14.3 p14.3 113250 ChimerSeq ChiTaRs ChiTaRs OXR1-OXR1 OXR1 chr8 107694303 OXR1 chr8 107732193 Exonic hg19 NA BF818667 Out-of-frame Intra-chr q23.1 q23.1 113251 ChimerSeq ChiTaRs ChiTaRs MTCH2-MTCH2 MTCH2 chr11 47640473 MTCH2 chr11 47644252 Exonic hg19 NA AI565357 Out-of-frame Intra-chr p11.2 p11.2 113252 ChimerSeq ChiTaRs ChiTaRs COBL-COBL COBL chr7 51357167 COBL chr7 51299873 Exonic hg19 NA AW590697 Out-of-frame Intra-chr p12.1 p12.1 113253 ChimerSeq ChiTaRs ChiTaRs RASSF7-GPRC5A RASSF7 chr11 563813 GPRC5A chr12 13058681 Exonic hg19 NA AW939967 Out-of-frame Inter-chr p15.5 p13.1 Tumor suppressor gene 113254 ChimerSeq ChiTaRs ChiTaRs ATP6V1A-TEX264 ATP6V1A chr3 113530656 TEX264 chr3 51733574 Exonic hg19 NA AF172327 Out-of-frame Intra-chr q13.31 p21.2 113255 ChimerSeq ChiTaRs ChiTaRs CGA-CGA CGA chr6 87795308 CGA chr6 87795481 Exonic hg19 NA AA441787 Out-of-frame Intra-chr q14.3 q14.3 113256 ChimerSeq ChiTaRs ChiTaRs TRIM63-PTMA TRIM63 chr1 26394106 PTMA chr2 232577207 Exonic hg19 NA BC015717 Out-of-frame Inter-chr p36.11 q37.1 113257 ChimerSeq ChiTaRs ChiTaRs SFPQ-SFPQ SFPQ chr1 35656512 SFPQ chr1 35654798 Exonic hg19 NA BE276277 Out-of-frame Intra-chr p34.3 p34.3 113258 ChimerSeq ChiTaRs ChiTaRs KIF20A-CDC23 KIF20A chr5 137523506 CDC23 chr5 137523557 Exonic hg19 NA BU678667 Out-of-frame Intra-chr q31.2 q31.2 113259 ChimerSeq ChiTaRs ChiTaRs CTNNA2-UBXN4 CTNNA2 chr2 80414834 UBXN4 chr2 136540532 Exonic hg19 NA AA278207 Out-of-frame Intra-chr p12 Tumor suppressor gene q21.3 113260 ChimerSeq ChiTaRs ChiTaRs IKBKB-DLD IKBKB chr8 42181470 DLD chr7 107557272 Exonic hg19 NA CV348467 Out-of-frame Inter-chr p11.21 Oncogene q31.1 113261 ChimerSeq ChiTaRs ChiTaRs CD36-TRANK1 CD36 chr7 80224112 TRANK1 chr3 36870216 Exonic hg19 NA BF359477 Out-of-frame Inter-chr q21.11 p22.2 113262 ChimerSeq ChiTaRs ChiTaRs HNRNPA2B1-ETV6 HNRNPA2B1 chr7 26236201 ETV6 chr12 12264271 Exonic hg19 NA BU940187 Out-of-frame Inter-chr p15.2 p13.2 Tumor suppressor gene Transcription factor 113263 ChimerSeq ChiTaRs ChiTaRs SCMH1-SGK494 SCMH1 chr1 41696781 SGK494 chr17 26935966 Exonic hg19 NA BF986207 Out-of-frame Inter-chr p34.2 Transcription factor q11.2 113264 ChimerSeq ChiTaRs ChiTaRs PRRC2C-PRRC2C PRRC2C chr1 171502100 PRRC2C chr1 171492358 Exonic hg19 NA CR983037 Out-of-frame Intra-chr q24.3 q24.3 113265 ChimerSeq ChiTaRs ChiTaRs USH2A-EPC2 USH2A chr1 216582534 EPC2 chr2 149519473 Exonic hg19 NA BE829017 Out-of-frame Inter-chr q41 q23.1 113266 ChimerSeq ChiTaRs ChiTaRs LPP-LSM1 LPP chr3 188434852 LSM1 chr8 38020935 Exonic hg19 NA AA501557 Out-of-frame Inter-chr q27.3 Oncogene p11.23 113267 ChimerSeq ChiTaRs ChiTaRs ZNF12-ZNF12 ZNF12 chr7 6728398 ZNF12 chr7 6728067 Exonic hg19 NA BM543917 Out-of-frame Intra-chr p22.1 Transcription factor p22.1 Transcription factor 113268 ChimerSeq ChiTaRs ChiTaRs BAI3-MTURN BAI3 chr6 69584696 MTURN chr7 30198535 Exonic hg19 NA AU311367 Out-of-frame Inter-chr p14.3 113269 ChimerSeq ChiTaRs ChiTaRs PTPRC-PRAM1 PTPRC chr1 198672523 PRAM1 chr19 8555886 Exonic hg19 NA BI023737 Out-of-frame Inter-chr Tumor suppressor gene p13.2 113270 ChimerSeq ChiTaRs ChiTaRs AKAP2-ZFAND3 AKAP2 chr9 112870227 ZFAND3 chr6 37933849 Exonic hg19 NA AW880287 Out-of-frame Inter-chr q31.3 p21.2 113271 ChimerSeq ChiTaRs ChiTaRs BMPR1A-BMPR1A BMPR1A chr10 88652929 BMPR1A chr10 88652120 Exonic hg19 NA DW410047 Out-of-frame Intra-chr q23.2 TKL:STKR Oncogene Tumor suppressor gene q23.2 TKL:STKR Oncogene Tumor suppressor gene 113272 ChimerSeq ChiTaRs ChiTaRs GJA5-GJA5 GJA5 chr1 147230504 GJA5 chr1 147230878 Exonic hg19 NA BQ369227 Out-of-frame Intra-chr q21.2 q21.2 113273 ChimerSeq ChiTaRs ChiTaRs AGR2-CSE1L AGR2 chr7 16832375 CSE1L chr20 47704579 Exonic hg19 NA AA306967 Out-of-frame Inter-chr p21.1 q13.13 113274 ChimerSeq ChiTaRs ChiTaRs PSAP-IDH3B PSAP chr10 73581743 IDH3B chr20 2640724 Exonic hg19 NA BI015407 Out-of-frame Inter-chr q22.1 p13 113275 ChimerSeq ChiTaRs ChiTaRs SRRM1-SRRM1 SRRM1 chr1 24979005 SRRM1 chr1 24995882 Exonic hg19 NA BM678067 Out-of-frame Intra-chr p36.11 p36.11 113276 ChimerSeq ChiTaRs ChiTaRs CD74-UBAC2 CD74 chr5 149781386 UBAC2 chr13 99861357 Exonic hg19 NA AI240457 Out-of-frame Inter-chr q33.1 q32.3 113277 ChimerSeq ChiTaRs ChiTaRs VIL1-VIL1 VIL1 chr2 219305527 VIL1 chr2 219305552 Exonic hg19 NA BE513047 Out-of-frame Intra-chr q35 Tumor suppressor gene q35 Tumor suppressor gene 113278 ChimerSeq ChiTaRs ChiTaRs SLC39A1-PARD3 SLC39A1 chr1 153932493 PARD3 chr10 34752124 Exonic hg19 NA BF945977 Out-of-frame Inter-chr q21.3 Tumor suppressor gene p11.21 113279 ChimerSeq ChiTaRs ChiTaRs SPTAN1-CRAT SPTAN1 chr9 131395779 CRAT chr9 131860855 Exonic hg19 NA AW843407 Out-of-frame Intra-chr q34.11 q34.11 113280 ChimerSeq ChiTaRs ChiTaRs ANKRD17-CD47 ANKRD17 chr4 74110266 CD47 chr3 107772702 Exonic hg19 NA AW857537 Out-of-frame Inter-chr q13.3 q13.12 113281 ChimerSeq ChiTaRs ChiTaRs TBL1X-TBL1X TBL1X chrX 9687778 TBL1X chrX 9686972 Exonic hg19 NA BQ774627 Out-of-frame Intra-chr p22.31 p22.31 113282 ChimerSeq ChiTaRs ChiTaRs FOCAD-MALAT1 FOCAD chr9 20880618 MALAT1 chr11 65267688 Exonic hg19 NA AW367687 Out-of-frame Inter-chr p21.3 q13.1 113283 ChimerSeq ChiTaRs ChiTaRs ZCCHC7-DLEU2 ZCCHC7 chr9 37221762 DLEU2 chr13 50652352 Exonic hg19 NA AI909067 Out-of-frame Inter-chr p13.2 q14.2 Tumor suppressor gene 113284 ChimerSeq ChiTaRs ChiTaRs MAL-CSNK1D MAL chr2 95705948 CSNK1D chr17 80218040 Exonic hg19 NA BF751667 Out-of-frame Inter-chr q11.1 Tumor suppressor gene q25.3 113285 ChimerSeq ChiTaRs ChiTaRs SH3RF2-TANC1 SH3RF2 chr5 145461336 TANC1 chr2 159904663 Exonic hg19 NA AW449407 Out-of-frame Inter-chr q32 q24.2 113286 ChimerSeq ChiTaRs ChiTaRs FN1-DAGLB FN1 chr2 216241248 DAGLB chr7 6502734 Exonic hg19 NA BI050907 Out-of-frame Inter-chr q35 Oncogene p22.1 113287 ChimerSeq ChiTaRs ChiTaRs SPSB4-SPSB4 SPSB4 chr3 140799710 SPSB4 chr3 140797241 Exonic hg19 NA AA247137 Out-of-frame Intra-chr q23 q23 113288 ChimerSeq ChiTaRs ChiTaRs SPEN-SPEN SPEN chr1 16264489 SPEN chr1 16264131 Exonic hg19 NA BE164907 Out-of-frame Intra-chr p36.21 Transcription factor p36.21 Transcription factor 113289 ChimerSeq ChiTaRs ChiTaRs RRAGA-SESN2 RRAGA chr9 19051022 SESN2 chr1 28594453 Exonic hg19 NA AW300167 Out-of-frame Inter-chr p22.1 p35.3 113290 ChimerSeq ChiTaRs ChiTaRs GNB1-CCND1 GNB1 chr1 1716854 CCND1 chr11 69467344 Exonic hg19 NA DB357327 Out-of-frame Inter-chr p36.33 q13.3 Oncogene 113291 ChimerSeq ChiTaRs ChiTaRs LIN7C-RAB31 LIN7C chr11 27516749 RAB31 chr18 9741015 Exonic hg19 NA BU751867 Out-of-frame Inter-chr p14.1 p11.22 113292 ChimerSeq ChiTaRs ChiTaRs ABCF1-LOC283624 ABCF1 chr6 1886008 LOC283624 chr14 21672708 Exonic hg19 NA CV374087 Out-of-frame Inter-chr 113293 ChimerSeq ChiTaRs ChiTaRs CHCHD6-CHCHD6 CHCHD6 chr3 126449463 CHCHD6 chr3 126449447 Exonic hg19 NA BG118827 Out-of-frame Intra-chr q21.3 q21.3 113294 ChimerSeq ChiTaRs ChiTaRs NAGK-NAGK NAGK chr2 71300374 NAGK chr2 71300055 Exonic hg19 NA AW748767 Out-of-frame Intra-chr p13.3 p13.3 113295 ChimerSeq ChiTaRs ChiTaRs DNAH12-FUT10 DNAH12 chr3 57496708 FUT10 chr8 33230162 Exonic hg19 NA AW511397 Out-of-frame Inter-chr p14.3 p12 113296 ChimerSeq ChiTaRs ChiTaRs CD84-TRIM39 CD84 chr1 160534608 TRIM39 chr6 1640262 Exonic hg19 NA AI651527 Out-of-frame Inter-chr q23.3 113297 ChimerSeq ChiTaRs ChiTaRs IQGAP2-C15orf57 IQGAP2 chr5 75974037 C15orf57 chr15 40845914 Exonic hg19 NA BP431967 Out-of-frame Inter-chr q13.3 Tumor suppressor gene q15.1 113298 ChimerSeq ChiTaRs ChiTaRs TM9SF3-SNRK TM9SF3 chr10 98281113 SNRK chr3 43373285 Exonic hg19 NA BE708017 Out-of-frame Inter-chr q24.1 p22.1 CAMK:CAMKL 113299 ChimerSeq ChiTaRs ChiTaRs ADSS-JMJD1C ADSS chr1 244572621 JMJD1C chr10 64976007 Exonic hg19 NA DB348377 Out-of-frame Inter-chr q44 q21.3 113300 ChimerSeq ChiTaRs ChiTaRs STAG2-STAG2 STAG2 chrX 123104637 STAG2 chrX 123105508 Exonic hg19 NA BE072187 Out-of-frame Intra-chr q25 Oncogene q25 Oncogene 113301 ChimerSeq ChiTaRs ChiTaRs SGPL1-USP39 SGPL1 chr10 72604348 USP39 chr2 85836033 Exonic hg19 NA BE185347 Out-of-frame Inter-chr q22.1 p11.2 113302 ChimerSeq ChiTaRs ChiTaRs SSBP2-WIPF3 SSBP2 chr5 81000513 WIPF3 chr7 29955915 Exonic hg19 NA BU741957 Out-of-frame Inter-chr q14.1 Tumor suppressor gene p14.3 113303 ChimerSeq ChiTaRs ChiTaRs AIF1-TMED5 AIF1 chr6 2915087 TMED5 chr1 93615951 Exonic hg19 NA AW838647 Out-of-frame Inter-chr Tumor suppressor gene p22.1 113304 ChimerSeq ChiTaRs ChiTaRs RAB33B-RAB33B RAB33B chr4 140397009 RAB33B chr4 140397006 Exonic hg19 NA AA610417 Out-of-frame Intra-chr q31.1 q31.1 113305 ChimerSeq ChiTaRs ChiTaRs CHL1-CHL1 CHL1 chr3 447893 CHL1 chr3 447411 Exonic hg19 NA BU678757 Out-of-frame Intra-chr p26.3 p26.3 113306 ChimerSeq ChiTaRs ChiTaRs USP34-HSDL2 USP34 chr2 61483546 HSDL2 chr9 115190549 Exonic hg19 NA BE148707 Out-of-frame Inter-chr p15 q32 113307 ChimerSeq ChiTaRs ChiTaRs ACVR1C-MESDC2 ACVR1C chr2 158383504 MESDC2 chr15 81270546 Exonic hg19 NA AV731627 Out-of-frame Inter-chr q24.1 Tumor suppressor gene q25.1 113308 ChimerSeq ChiTaRs ChiTaRs MAT2A-CYP19A1 MAT2A chr2 85768067 CYP19A1 chr15 51501673 Exonic hg19 NA BG620787 Out-of-frame Inter-chr p11.2 Tumor suppressor gene q21.2 113309 ChimerSeq ChiTaRs ChiTaRs SESTD1-SESTD1 SESTD1 chr2 179977487 SESTD1 chr2 179979786 Exonic hg19 NA BM984417 Out-of-frame Intra-chr q31.2 q31.2 113310 ChimerSeq ChiTaRs ChiTaRs RNF144A-DYNC2H1 RNF144A chr2 7112877 DYNC2H1 chr11 103075656 Exonic hg19 NA CB045807 Out-of-frame Inter-chr p25.1 Tumor suppressor gene q22.3 113311 ChimerSeq ChiTaRs ChiTaRs FAM65B-STIM1 FAM65B chr6 24840602 STIM1 chr11 3890478 Exonic hg19 NA BI021317 Out-of-frame Inter-chr p15.4 113312 ChimerSeq ChiTaRs ChiTaRs GFPT2-GFPT2 GFPT2 chr5 179727892 GFPT2 chr5 179727913 Exonic hg19 NA BE841297 Out-of-frame Intra-chr q35.3 q35.3 113313 ChimerSeq ChiTaRs ChiTaRs GSTO2-GSTO2 GSTO2 chr10 106059086 GSTO2 chr10 106058886 Exonic hg19 NA BE771867 Out-of-frame Intra-chr q25.1 q25.1 113314 ChimerSeq ChiTaRs ChiTaRs PRSS48-CRAMP1L PRSS48 chr4 152201447 CRAMP1L chr16 1724045 Exonic hg19 NA BG980947 Out-of-frame Inter-chr q31.3 113315 ChimerSeq ChiTaRs ChiTaRs TSN-ARL4D TSN chr2 122519075 ARL4D chr17 41477671 Exonic hg19 NA AW157777 Out-of-frame Inter-chr q14.3 q21.31 113316 ChimerSeq ChiTaRs ChiTaRs TOPBP1-TOPBP1 TOPBP1 chr3 133334106 TOPBP1 chr3 133332878 Exonic hg19 NA AA761237 Out-of-frame Intra-chr q22.1 q22.1 113317 ChimerSeq ChiTaRs ChiTaRs CASK-COL24A1 CASK chrX 41533262 COL24A1 chr1 86356901 Exonic hg19 NA BU963327 Out-of-frame Inter-chr p11.4 CAMK:CASK p22.3 113318 ChimerSeq ChiTaRs ChiTaRs COL12A1-COL12A1 COL12A1 chr6 75794622 COL12A1 chr6 75794042 Exonic hg19 NA AL359627 Out-of-frame Intra-chr q14.1 q14.1 113319 ChimerSeq ChiTaRs ChiTaRs NAP1L4-NAP1L4 NAP1L4 chr11 2966679 NAP1L4 chr11 2969321 Exonic hg19 NA DB239547 Out-of-frame Intra-chr 113320 ChimerSeq ChiTaRs ChiTaRs GCNT2-GCNT2 GCNT2 chr6 10627918 GCNT2 chr6 10627887 Exonic hg19 NA BU155927 Out-of-frame Intra-chr p24.3 p24.3 113321 ChimerSeq ChiTaRs ChiTaRs AGBL4-DNAH17 AGBL4 chr1 50138501 DNAH17 chr17 76456406 Exonic hg19 NA AW841137 Out-of-frame Inter-chr p33 q25.3 113322 ChimerSeq ChiTaRs ChiTaRs TF-MATR3 TF chr3 133474221 MATR3 chr5 138641490 Exonic hg19 NA AI064867 Out-of-frame Inter-chr q22.1 q31.2 113323 ChimerSeq ChiTaRs ChiTaRs ZNF451-DLGAP1 ZNF451 chr6 56976908 DLGAP1 chr18 3781638 Exonic hg19 NA AW237297 Out-of-frame Inter-chr p12.1 Transcription factor p11.31 113324 ChimerSeq ChiTaRs ChiTaRs KIAA0232-KIAA0232 KIAA0232 chr4 6885096 KIAA0232 chr4 6884691 Exonic hg19 NA CA313447 Out-of-frame Intra-chr p16.1 p16.1 113325 ChimerSeq ChiTaRs ChiTaRs ANAPC16-ANAPC16 ANAPC16 chr10 73826804 ANAPC16 chr10 73823969 Exonic hg19 NA BF091837 Out-of-frame Intra-chr q22.1 q22.1 113326 ChimerSeq ChiTaRs ChiTaRs SRSF7-PECAM1 SRSF7 chr2 38975825 PECAM1 chr17 62399931 Exonic hg19 NA BG007477 Out-of-frame Inter-chr p22.1 q23.3 113327 ChimerSeq ChiTaRs ChiTaRs BGN-TSHZ1 BGN chrX 152775004 TSHZ1 chr18 72999792 Exonic hg19 NA DB313457 3'UTR-CDS Inter-chr q28 q22.3 Transcription factor 113328 ChimerSeq ChiTaRs ChiTaRs TMEM151B-RETSAT TMEM151B chr6 44272822 RETSAT chr2 85570959 Exonic hg19 NA AW847517 Out-of-frame Inter-chr p21.1 p11.2 113329 ChimerSeq ChiTaRs ChiTaRs CHI3L1-CHI3L1 CHI3L1 chr1 203153993 CHI3L1 chr1 203151619 Exonic hg19 NA DB159477 Out-of-frame Intra-chr q32.1 q32.1 113330 ChimerSeq ChiTaRs ChiTaRs PDIA6-ATP6V1C2 PDIA6 chr2 10927501 ATP6V1C2 chr2 10924297 Exonic hg19 NA BE934567 Out-of-frame Intra-chr p25.1 p25.1 113331 ChimerSeq ChiTaRs ChiTaRs GGCT-PPAP2A GGCT chr7 30540064 PPAP2A chr5 54788745 Exonic hg19 NA BE710077 Out-of-frame Inter-chr p14.3 113332 ChimerSeq ChiTaRs ChiTaRs MKI67-SORBS1 MKI67 chr10 129899686 SORBS1 chr10 97153945 Exonic hg19 NA AW361227 Out-of-frame Intra-chr q26.2 q24.1 113333 ChimerSeq ChiTaRs ChiTaRs L3MBTL3-FAM63A L3MBTL3 chr6 130419676 FAM63A chr1 150978781 Exonic hg19 NA AW748397 Out-of-frame Inter-chr q23.1 Transcription factor 113334 ChimerSeq ChiTaRs ChiTaRs GOLGA4-ATXN1 GOLGA4 chr3 37315313 ATXN1 chr6 16317365 Exonic hg19 NA BF886737 Out-of-frame Inter-chr p22.2 p22.3 113335 ChimerSeq ChiTaRs ChiTaRs MARCH1-SKP1 2001_ 3_ 1_ chr4 164451261 SKP1 chr5 133506922 Exonic hg19 NA AW888567 Out-of-frame Inter-chr q31.1 113336 ChimerSeq ChiTaRs ChiTaRs WAC-MAP3K14 WAC chr10 28846486 MAP3K14 chr17 43346656 Exonic hg19 NA CF887407 Out-of-frame Inter-chr p12.1 q21.31 113337 ChimerSeq ChiTaRs ChiTaRs FAM107B-DGKG FAM107B chr10 14717034 DGKG chr3 185969588 Exonic hg19 NA AA322377 Out-of-frame Inter-chr p13 q27.3 113338 ChimerSeq ChiTaRs ChiTaRs ARPC2-ARPC2 ARPC2 chr2 219118966 ARPC2 chr2 219093522 Exonic hg19 NA BE073187 Out-of-frame Intra-chr q35 q35 113339 ChimerSeq ChiTaRs ChiTaRs NUCKS1-WNK1 NUCKS1 chr1 205686678 WNK1 chr12 977682 Exonic hg19 NA BE503407 Out-of-frame Inter-chr q32.1 p13.33 113340 ChimerSeq ChiTaRs ChiTaRs PDLIM5-IFIH1 PDLIM5 chr4 95490529 IFIH1 chr2 163163605 Exonic hg19 NA AL080107 Out-of-frame Inter-chr q22.3 q24.2 113341 ChimerSeq ChiTaRs ChiTaRs BAG6-TMEM175 BAG6 chr6 2939505 TMEM175 chr4 952252 Exonic hg19 NA BQ186937 Out-of-frame Inter-chr p21.33 p16.3 113342 ChimerSeq ChiTaRs ChiTaRs ESRRG-UBA1 ESRRG chr1 217240030 UBA1 chrX 47066286 Exonic hg19 NA BE327527 Out-of-frame Inter-chr q41 Transcription factor p11.3 113343 ChimerSeq ChiTaRs ChiTaRs NCK1-ZFAND4 NCK1 chr3 136665068 ZFAND4 chr10 46144478 Exonic hg19 NA DB051827 Out-of-frame Inter-chr q22.3 q11.22 113344 ChimerSeq ChiTaRs ChiTaRs ACTN2-ACTN2 ACTN2 chr1 236918382 ACTN2 chr1 236925851 Exonic hg19 NA T12517 Out-of-frame Intra-chr q43 q43 113345 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-NDE1 INS-IGF2 chr11 2159809 NDE1 chr16 15797001 Exonic hg19 NA AF217977 Out-of-frame Inter-chr p15.5 p13.11 Oncogene 113346 ChimerSeq ChiTaRs ChiTaRs FBXW7-KLF12 FBXW7 chr4 153250761 KLF12 chr13 74683445 Exonic hg19 NA AI133397 Out-of-frame Inter-chr q31.3 Oncogene Tumor suppressor gene q22.1 Transcription factor 113347 ChimerSeq ChiTaRs ChiTaRs PPFIA4-SYT2 PPFIA4 chr1 203047863 SYT2 chr1 202565206 Exonic hg19 NA DB297497 Out-of-frame Intra-chr q32.1 q32.1 113348 ChimerSeq ChiTaRs ChiTaRs DHX57-MCF2 DHX57 chr2 39070933 MCF2 chrX 138686840 Exonic hg19 NA DA274457 Out-of-frame Inter-chr p22.1 q27.1 113349 ChimerSeq ChiTaRs ChiTaRs SDC1-PRRC2B SDC1 chr2 20401808 PRRC2B chr9 134374752 Exonic hg19 NA AA368147 Out-of-frame Inter-chr p24.1 q34.13 113350 ChimerSeq ChiTaRs ChiTaRs C7-DEFA6 C7 chr5 40936975 DEFA6 chr8 6782216 Exonic hg19 NA BP426067 Out-of-frame Inter-chr p13.1 Tumor suppressor gene p23.1 113351 ChimerSeq ChiTaRs ChiTaRs FNBP1-CKB FNBP1 chr9 132797574 CKB chr14 103988695 Exonic hg19 NA BE928567 Out-of-frame Inter-chr q34.11 q32.33 113352 ChimerSeq ChiTaRs ChiTaRs BAZ1B-BAZ1B BAZ1B chr7 72891980 BAZ1B chr7 72883845 Exonic hg19 NA BF326857 Out-of-frame Intra-chr q11.23 q11.23 113353 ChimerSeq ChiTaRs ChiTaRs NUB1-NUB1 NUB1 chr7 151075307 NUB1 chr7 151073760 Exonic hg19 NA BP194857 Out-of-frame Intra-chr q36.1 q36.1 113354 ChimerSeq ChiTaRs ChiTaRs RTN4-RTN4 RTN4 chr2 55200089 RTN4 chr2 55202415 Exonic hg19 NA AI874377 Out-of-frame Intra-chr p16.1 Tumor suppressor gene p16.1 Tumor suppressor gene 113355 ChimerSeq ChiTaRs ChiTaRs UXS1-PCBP2 UXS1 chr2 106713264 PCBP2 chr12 53854515 Exonic hg19 NA BE156057 Out-of-frame Inter-chr q12.2 q13.13 113356 ChimerSeq ChiTaRs ChiTaRs SLC4A10-SLC4A10 SLC4A10 chr2 162840243 SLC4A10 chr2 162759364 Exonic hg19 NA AB040457 Out-of-frame Intra-chr q24.2 q24.2 113357 ChimerSeq ChiTaRs ChiTaRs TEK-MAN1A1 TEK chr9 27161403 MAN1A1 chr6 119500317 Exonic hg19 NA X74837 Out-of-frame Inter-chr p21.2 q22.31 113358 ChimerSeq ChiTaRs ChiTaRs KCNMA1-KCNMA1 KCNMA1 chr10 79146986 KCNMA1 chr10 79146505 Exonic hg19 NA AA225487 Out-of-frame Intra-chr q22.3 q22.3 113359 ChimerSeq ChiTaRs ChiTaRs KAT6B-LYN KAT6B chr10 76781848 LYN chr8 56923442 Exonic hg19 NA BE720017 Out-of-frame Inter-chr Oncogene q12.1 TK:Src 113360 ChimerSeq ChiTaRs ChiTaRs SLC2A1-ATN1 SLC2A1 chr1 43406943 ATN1 chr12 7047661 Exonic hg19 NA AW352237 Out-of-frame Inter-chr p34.2 p13.31 113361 ChimerSeq ChiTaRs ChiTaRs WBSCR17-WBSCR17 WBSCR17 chr7 71177943 WBSCR17 chr7 71177248 Exonic hg19 NA BI001777 Out-of-frame Intra-chr q11.22 q11.22 113362 ChimerSeq ChiTaRs ChiTaRs CUX1-CUX1 CUX1 chr7 101798309 CUX1 chr7 101798394 Exonic hg19 NA AA077917 Out-of-frame Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 Tumor suppressor gene Transcription factor 113363 ChimerSeq ChiTaRs ChiTaRs DOCK3-DOCK3 DOCK3 chr3 51151117 DOCK3 chr3 51150897 Exonic hg19 NA CV396597 Out-of-frame Intra-chr p21.2 p21.2 113364 ChimerSeq ChiTaRs ChiTaRs HIST1H2BE-NPC1 HIST1H2BE chr6 26184457 NPC1 chr18 21166352 Exonic hg19 NA BP362977 Out-of-frame Inter-chr p22.2 q11.2 113365 ChimerSeq ChiTaRs ChiTaRs GRHL2-LOC100506207 GRHL2 chr8 102505018 LOC100506207 chr6 8740591 Exonic hg19 NA DN916457 Out-of-frame Inter-chr q22.3 Transcription factor 113366 ChimerSeq ChiTaRs ChiTaRs FLJ16124-PCLO FLJ16124 chr2 66203616 PCLO chr7 82583059 Exonic hg19 NA D59367 Out-of-frame Inter-chr q21.11 113367 ChimerSeq ChiTaRs ChiTaRs TOP1MT-SND1 TOP1MT chr8 144392312 SND1 chr7 127507030 Exonic hg19 NA AW861197 Out-of-frame Inter-chr q24.3 q32.1 113368 ChimerSeq ChiTaRs ChiTaRs YWHAG-CYB561A3 YWHAG chr7 75988140 CYB561A3 chr11 61120473 Exonic hg19 NA BG824227 Out-of-frame Inter-chr q11.23 q12.2 113369 ChimerSeq ChiTaRs ChiTaRs LRRC14-LRRC14 LRRC14 chr8 145749274 LRRC14 chr8 145748962 Exonic hg19 NA CA450607 Out-of-frame Intra-chr q24.3 q24.3 113370 ChimerSeq ChiTaRs ChiTaRs HCN3-MUC1 HCN3 chr1 155259558 MUC1 chr1 155159684 Exonic hg19 NA AI675977 Out-of-frame Intra-chr q22 q22 Oncogene 113371 ChimerSeq ChiTaRs ChiTaRs THPO-THPO THPO chr3 184094123 THPO chr3 184089773 Exonic hg19 NA D32047 Out-of-frame Intra-chr q27.1 q27.1 113372 ChimerSeq ChiTaRs ChiTaRs GUK1-RP9 GUK1 chr1 228336647 RP9 chr7 33134577 Exonic hg19 NA BU676367 Out-of-frame Inter-chr q42.13 p14.3 113373 ChimerSeq ChiTaRs ChiTaRs VPS54-RBPMS2 VPS54 chr2 64245646 RBPMS2 chr15 65064925 Exonic hg19 NA AI637777 Out-of-frame Inter-chr p14 q22.31 113374 ChimerSeq ChiTaRs ChiTaRs FAR1-FAR1 FAR1 chr11 13695580 FAR1 chr11 13692089 Exonic hg19 NA BF906017 Out-of-frame Intra-chr p15.3 p15.3 113375 ChimerSeq ChiTaRs ChiTaRs GUSB-CERS5 GUSB chr7 65439319 CERS5 chr12 50529754 Exonic hg19 NA CV328677 Out-of-frame Inter-chr q11.21 q13.12 113376 ChimerSeq ChiTaRs ChiTaRs PPA1-DSP PPA1 chr10 71974337 DSP chr6 7578700 Exonic hg19 NA AW578437 Out-of-frame Inter-chr q22.1 p24.3 Tumor suppressor gene 113377 ChimerSeq ChiTaRs ChiTaRs MYO6-MYO6 MYO6 chr6 76599866 MYO6 chr6 76589571 Exonic hg19 NA CA430517 Out-of-frame Intra-chr q14.1 q14.1 113378 ChimerSeq ChiTaRs ChiTaRs PCOLCE-SEMA3B PCOLCE chr7 100205794 SEMA3B chr3 50314069 Exonic hg19 NA AI378967 Out-of-frame Inter-chr q22.1 p21.31 Tumor suppressor gene 113379 ChimerSeq ChiTaRs ChiTaRs CLU-RAB3C CLU chr8 27455621 RAB3C chr5 58075784 Exonic hg19 NA AW262717 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q11.2 113380 ChimerSeq ChiTaRs ChiTaRs PDSS2-PDSS2 PDSS2 chr6 107531709 PDSS2 chr6 107531738 Exonic hg19 NA AI827607 Out-of-frame Intra-chr q21 Tumor suppressor gene q21 Tumor suppressor gene 113381 ChimerSeq ChiTaRs ChiTaRs NUP205-NUP205 NUP205 chr7 135333501 NUP205 chr7 135333164 Exonic hg19 NA CA313337 Out-of-frame Intra-chr q33 q33 113382 ChimerSeq ChiTaRs ChiTaRs ECT2-ECT2 ECT2 chr3 172476850 ECT2 chr3 172525586 Exonic hg19 NA BQ028167 Out-of-frame Intra-chr q26.31 Tumor suppressor gene q26.31 Tumor suppressor gene 113383 ChimerSeq ChiTaRs ChiTaRs MSH2-MSH2 MSH2 chr2 47641485 MSH2 chr2 47641507 Exonic hg19 NA CN338457 Out-of-frame Intra-chr p21 Oncogene Tumor suppressor gene p21 Oncogene Tumor suppressor gene 113384 ChimerSeq ChiTaRs ChiTaRs JMJD1C-INO80 JMJD1C chr10 65079531 INO80 chr15 41319027 Exonic hg19 NA BF370837 Out-of-frame Inter-chr q21.3 q15.1 113385 ChimerSeq ChiTaRs ChiTaRs HSD17B12-HSD17B12 HSD17B12 chr11 43714992 HSD17B12 chr11 43716676 Exonic hg19 NA CB218117 Out-of-frame Intra-chr p11.2 p11.2 113386 ChimerSeq ChiTaRs ChiTaRs GYPC-GYPC GYPC chr2 127453995 GYPC chr2 127413824 Exonic hg19 NA BG431197 Out-of-frame Intra-chr q14.3 q14.3 113387 ChimerSeq ChiTaRs ChiTaRs MYT1L-KCNH7 MYT1L chr2 2160050 KCNH7 chr2 163535138 Exonic hg19 NA T05757 Out-of-frame Intra-chr p25.3 Transcription factor q24.2 113388 ChimerSeq ChiTaRs ChiTaRs DTNB-LRRK2 DTNB chr2 25821606 LRRK2 chr12 40759747 Exonic hg19 NA BE175957 Out-of-frame Inter-chr p23.3 q12 TKL:LRRK 113389 ChimerSeq ChiTaRs ChiTaRs ZCCHC17-ZCCHC17 ZCCHC17 chr1 31837783 ZCCHC17 chr1 31837218 Exonic hg19 NA BU618487 Out-of-frame Intra-chr p35.2 p35.2 113390 ChimerSeq ChiTaRs ChiTaRs EIF5B-EIF5B EIF5B chr2 100016237 EIF5B chr2 99999332 Exonic hg19 NA AA687907 Out-of-frame Intra-chr q11.2 q11.2 113391 ChimerSeq ChiTaRs ChiTaRs FAM49B-FAM49B FAM49B chr8 130980170 FAM49B chr8 130980146 Exonic hg19 NA CA311497 Out-of-frame Intra-chr q24.21 q24.21 113392 ChimerSeq ChiTaRs ChiTaRs SLC25A25-SPINK5 SLC25A25 chr9 130871118 SPINK5 chr5 147495959 Exonic hg19 NA AW084877 Out-of-frame Inter-chr q34.11 q32 113393 ChimerSeq ChiTaRs ChiTaRs ENTPD7-ERBB3 ENTPD7 chr10 101466808 ERBB3 chr12 56496798 Exonic hg19 NA AW994887 Out-of-frame Inter-chr q24.2 q13.2 Oncogene 113394 ChimerSeq ChiTaRs ChiTaRs NEDD9-CLINT1 NEDD9 chr6 11186909 CLINT1 chr5 157263556 Exonic hg19 NA AW858887 Out-of-frame Inter-chr p24.2 q33.3 113395 ChimerSeq ChiTaRs ChiTaRs ARAP2-PACS1 ARAP2 chr4 36066586 PACS1 chr11 65983613 Exonic hg19 NA BG987597 Out-of-frame Inter-chr p14 q13.1 113396 ChimerSeq ChiTaRs ChiTaRs SNED1-SNED1 SNED1 chr2 242027703 SNED1 chr2 242027534 Exonic hg19 NA BE843547 Out-of-frame Intra-chr q37.3 q37.3 113397 ChimerSeq ChiTaRs ChiTaRs UTRN-UTRN UTRN chr6 145022469 UTRN chr6 145025483 Exonic hg19 NA BQ022847 Out-of-frame Intra-chr q24.2 q24.2 113398 ChimerSeq ChiTaRs ChiTaRs ARHGEF11-COL6A3 ARHGEF11 chr1 157015181 COL6A3 chr2 238267677 Exonic hg19 NA BE696037 5'UTR-CDS Inter-chr q23.1 q37.3 113399 ChimerSeq ChiTaRs ChiTaRs PDLIM5-PDLIM5 PDLIM5 chr4 95583689 PDLIM5 chr4 95585129 Exonic hg19 NA AA568207 Out-of-frame Intra-chr q22.3 q22.3 113400 ChimerSeq ChiTaRs ChiTaRs TMEM246-TMEM246 TMEM246 chr9 104238187 TMEM246 chr9 104237694 Exonic hg19 NA BF110047 Out-of-frame Intra-chr q31.1 q31.1 113401 ChimerSeq ChiTaRs ChiTaRs FNTA-FNTA FNTA chr8 42937223 FNTA chr8 42937761 Exonic hg19 NA CA868587 Out-of-frame Intra-chr p11.21 p11.21 113402 ChimerSeq ChiTaRs ChiTaRs TSPYL2-NCAM2 TSPYL2 chrX 53117351 NCAM2 chr21 22472371 Exonic hg19 NA BF947917 Out-of-frame Inter-chr p11.22 q21.1 Tumor suppressor gene 113403 ChimerSeq ChiTaRs ChiTaRs CCDC19-BTAF1 CCDC19 chr1 159847158 BTAF1 chr10 93732108 Exonic hg19 NA CA312927 Out-of-frame Inter-chr q23.32 113404 ChimerSeq ChiTaRs ChiTaRs TAMM41-SGIP1 TAMM41 chr3 11852837 SGIP1 chr1 67011289 Exonic hg19 NA AW838547 Out-of-frame Inter-chr p25.2 p31.3 113405 ChimerSeq ChiTaRs ChiTaRs LAMB3-STOX2 LAMB3 chr1 209791312 STOX2 chr4 184911977 Exonic hg19 NA AW379287 Out-of-frame Inter-chr q32.2 q35.1 113406 ChimerSeq ChiTaRs ChiTaRs ALB-ALB ALB chr4 74282070 ALB chr4 74283298 Exonic hg19 NA AI064877 Out-of-frame Intra-chr q13.3 q13.3 113407 ChimerSeq ChiTaRs ChiTaRs C9orf72-GMCL1 C9orf72 chr9 27566974 GMCL1 chr2 70067712 Exonic hg19 NA BF811117 Out-of-frame Inter-chr p21.2 p13.3 113408 ChimerSeq ChiTaRs ChiTaRs BMPR2-EPC1 BMPR2 chr2 203427718 EPC1 chr10 32598438 Exonic hg19 NA CB052857 Out-of-frame Inter-chr q33.1 TKL:STKR Tumor suppressor gene p11.22 113409 ChimerSeq ChiTaRs ChiTaRs WDPCP-AMBRA1 WDPCP chr2 63530850 AMBRA1 chr11 46542555 Exonic hg19 NA BF933577 Out-of-frame Inter-chr p15 p11.2 113410 ChimerSeq ChiTaRs ChiTaRs USH1C-SRPR USH1C chr11 17519781 SRPR chr11 126135594 Exonic hg19 NA BE764327 Out-of-frame Intra-chr p15.1 113411 ChimerSeq ChiTaRs ChiTaRs MUC4-MAGEF1 MUC4 chr3 195515492 MAGEF1 chr3 184428153 Exonic hg19 NA BQ689257 Out-of-frame Intra-chr q27.1 113412 ChimerSeq ChiTaRs ChiTaRs DLD-SURF4 DLD chr7 107560184 SURF4 chr9 136228391 Exonic hg19 NA BG952037 Out-of-frame Inter-chr q31.1 113413 ChimerSeq ChiTaRs ChiTaRs NUCKS1-NUCKS1 NUCKS1 chr1 205712790 NUCKS1 chr1 205713166 Exonic hg19 NA BE179417 Out-of-frame Intra-chr q32.1 q32.1 113414 ChimerSeq ChiTaRs ChiTaRs PTGDS-SIDT2 PTGDS chr9 139872160 SIDT2 chr11 117052160 Exonic hg19 NA EB387717 Out-of-frame Inter-chr q34.3 q23.3 113415 ChimerSeq ChiTaRs ChiTaRs PIGG-PIGG PIGG chr4 533318 PIGG chr4 532939 Exonic hg19 NA CA312347 Out-of-frame Intra-chr p16.3 p16.3 113416 ChimerSeq ChiTaRs ChiTaRs TRAK2-SPAG11B TRAK2 chr2 202244241 SPAG11B chr8 7308138 Exonic hg19 NA X67697 Out-of-frame Inter-chr q33.1 p23.1 113417 ChimerSeq ChiTaRs ChiTaRs SNHG1-SNHG1 SNHG1 chr11 62620593 SNHG1 chr11 62619605 Exonic hg19 NA BF888107 Out-of-frame Intra-chr q12.3 q12.3 113418 ChimerSeq ChiTaRs ChiTaRs EXT1-EXT1 EXT1 chr8 118875337 EXT1 chr8 118875594 Exonic hg19 NA AA868517 Out-of-frame Intra-chr q24.11 Oncogene Tumor suppressor gene q24.11 Oncogene Tumor suppressor gene 113419 ChimerSeq ChiTaRs ChiTaRs PHRF1-C3 PHRF1 chr11 605637 C3 chr19 6677962 Exonic hg19 NA BF873067 Out-of-frame Inter-chr p15.5 p13.3 113420 ChimerSeq ChiTaRs ChiTaRs SKP1-AGAP1 SKP1 chr5 133507224 AGAP1 chr2 236434058 Exonic hg19 NA CV338477 Out-of-frame Inter-chr q31.1 q37.2 113421 ChimerSeq ChiTaRs ChiTaRs SKI-CLK3 SKI chr1 2234000 CLK3 chr15 74919979 Exonic hg19 NA BE770177 Out-of-frame Inter-chr p36.33 Transcription factor q24.1 CMGC:CLK 113422 ChimerSeq ChiTaRs ChiTaRs TOP2B-TOP2B TOP2B chr3 25641023 TOP2B chr3 25642610 Exonic hg19 NA BF154577 Out-of-frame Intra-chr p24.2 p24.2 113423 ChimerSeq ChiTaRs ChiTaRs RGS12-RGS12 RGS12 chr4 3424216 RGS12 chr4 3429531 Exonic hg19 NA BF224007 Out-of-frame Intra-chr p16.3 p16.3 113424 ChimerSeq ChiTaRs ChiTaRs ZFYVE9-SPAG16 ZFYVE9 chr1 52794352 SPAG16 chr2 215261495 Exonic hg19 NA BF355567 Out-of-frame Inter-chr p32.3 q34 113425 ChimerSeq ChiTaRs ChiTaRs LAPTM4A-GNAS LAPTM4A chr2 20240703 GNAS chr20 57484577 Exonic hg19 NA AW377567 Out-of-frame Inter-chr p24.1 q13.32 Oncogene 113426 ChimerSeq ChiTaRs ChiTaRs HSPA5-SF3A2 HSPA5 chr9 127999282 SF3A2 chr19 2248554 Exonic hg19 NA BF762437 Out-of-frame Inter-chr q33.3 p13.3 113427 ChimerSeq ChiTaRs ChiTaRs RPN1-GATAD2B RPN1 chr3 128385421 GATAD2B chr1 153894765 Exonic hg19 NA BE873777 Out-of-frame Inter-chr q21.3 Transcription factor 113428 ChimerSeq ChiTaRs ChiTaRs LRRFIP1-LRRFIP1 LRRFIP1 chr2 238667480 LRRFIP1 chr2 238667052 Exonic hg19 NA T93337 Out-of-frame Intra-chr q37.3 q37.3 113429 ChimerSeq ChiTaRs ChiTaRs HNRPDL-HAUS5 HNRPDL chr4 83347706 HAUS5 chr19 36115879 Exonic hg19 NA D20017 Out-of-frame Inter-chr q13.12 113430 ChimerSeq ChiTaRs ChiTaRs CENPO-SPARC CENPO chr2 25045242 SPARC chr5 151042783 Exonic hg19 NA BU625397 Out-of-frame Inter-chr p23.3 q33.1 Tumor suppressor gene 113431 ChimerSeq ChiTaRs ChiTaRs REV1-SIAE REV1 chr2 100020940 SIAE chr11 124523556 Exonic hg19 NA BF934287 Out-of-frame Inter-chr q11.2 q24.2 113432 ChimerSeq ChiTaRs ChiTaRs SURF6-RPL38 SURF6 chr9 136199561 RPL38 chr17 72199817 Exonic hg19 NA CR746137 Out-of-frame Inter-chr q25.1 113433 ChimerSeq ChiTaRs ChiTaRs RAD23B-GSN RAD23B chr9 110068802 GSN chr9 124080694 Exonic hg19 NA BF755677 Out-of-frame Intra-chr q31.2 Tumor suppressor gene q33.2 Tumor suppressor gene 113434 ChimerSeq ChiTaRs ChiTaRs RASGRF2-MBP RASGRF2 chr5 80291665 MBP chr18 74696775 Exonic hg19 NA DA342507 Out-of-frame Inter-chr q14.1 q23 113435 ChimerSeq ChiTaRs ChiTaRs NTPCR-ITGA9 NTPCR chr1 233105795 ITGA9 chr3 37733603 Exonic hg19 NA BI670307 Out-of-frame Inter-chr q42.2 p22.2 Oncogene 113436 ChimerSeq ChiTaRs ChiTaRs RELL1-SLC43A2 RELL1 chr4 37650964 SLC43A2 chr17 1505301 Exonic hg19 NA BG002707 Out-of-frame Inter-chr p14 113437 ChimerSeq ChiTaRs ChiTaRs DAG1-DAG1 DAG1 chr3 49560947 DAG1 chr3 49550377 Exonic hg19 NA CV413287 Out-of-frame Intra-chr p21.31 p21.31 113438 ChimerSeq ChiTaRs ChiTaRs MYO7B-C8orf58 MYO7B chr2 128351886 C8orf58 chr8 22461178 Exonic hg19 NA BG984747 Out-of-frame Inter-chr q14.3 p21.3 113439 ChimerSeq ChiTaRs ChiTaRs USP6NL-MCOLN1 USP6NL chr10 11505917 MCOLN1 chr19 7591377 Exonic hg19 NA BQ333917 Out-of-frame Inter-chr p14 p13.2 113440 ChimerSeq ChiTaRs ChiTaRs KCTD3-KCTD3 KCTD3 chr1 215794619 KCTD3 chr1 215752353 Exonic hg19 NA DA730857 Out-of-frame Intra-chr q41 q41 113441 ChimerSeq ChiTaRs ChiTaRs LDLRAD2-LDLRAD2 LDLRAD2 chr1 22149515 LDLRAD2 chr1 22149517 Exonic hg19 NA AA460617 Out-of-frame Intra-chr p36.12 p36.12 113442 ChimerSeq ChiTaRs ChiTaRs GLUD1-HBG2 GLUD1 chr10 88811405 HBG2 chr11 5350574 Exonic hg19 NA BM807517 Out-of-frame Inter-chr q23.2 p15.4 113443 ChimerSeq ChiTaRs ChiTaRs POGZ-CHCHD3 POGZ chr1 151396843 CHCHD3 chr7 132720362 Exonic hg19 NA BE161687 Out-of-frame Inter-chr q21.3 q33 Transcription factor 113444 ChimerSeq ChiTaRs ChiTaRs ORC3-CTDP1 ORC3 chr6 88372827 CTDP1 chr18 77504997 Exonic hg19 NA BF924797 Out-of-frame Inter-chr q15 113445 ChimerSeq ChiTaRs ChiTaRs MOXD1-MOXD1 MOXD1 chr6 132617977 MOXD1 chr6 132643884 Exonic hg19 NA DA498677 Out-of-frame Intra-chr q23.2 q23.2 113446 ChimerSeq ChiTaRs ChiTaRs RGL1-PSMF1 RGL1 chr1 183843636 PSMF1 chr20 1102599 Exonic hg19 NA AA309217 Out-of-frame Inter-chr q25.3 p13 113447 ChimerSeq ChiTaRs ChiTaRs POM121-POM121 POM121 chr7 72384217 POM121 chr7 72385037 Exonic hg19 NA BM715257 Out-of-frame Intra-chr q11.23 q11.23 113448 ChimerSeq ChiTaRs ChiTaRs ADO-ADO ADO chr10 64567311 ADO chr10 64566744 Exonic hg19 NA CA392397 Out-of-frame Intra-chr q21.3 q21.3 113449 ChimerSeq ChiTaRs ChiTaRs ZNF248-TNS1 ZNF248 chr10 38141778 TNS1 chr2 218673005 Exonic hg19 NA CB266787 Out-of-frame Inter-chr p11.21 Transcription factor q35 113450 ChimerSeq ChiTaRs ChiTaRs ZHX2-ZHX2 ZHX2 chr8 123864427 ZHX2 chr8 123864439 Exonic hg19 NA BG995457 Out-of-frame Intra-chr q24.13 Tumor suppressor gene Transcription factor q24.13 Tumor suppressor gene Transcription factor 113451 ChimerSeq ChiTaRs ChiTaRs HSP90AB1-ANKLE2 HSP90AB1 chr6 44216515 ANKLE2 chr12 133331405 Exonic hg19 NA DA450947 Out-of-frame Inter-chr p21.1 Oncogene q24.33 113452 ChimerSeq ChiTaRs ChiTaRs MAP3K2-MAP3K2 MAP3K2 chr2 128063502 MAP3K2 chr2 128063523 Exonic hg19 NA AK074577 Out-of-frame Intra-chr q14.3 STE:STE11 q14.3 STE:STE11 113453 ChimerSeq ChiTaRs ChiTaRs TSPAN7-TSPAN7 TSPAN7 chrX 38547722 TSPAN7 chrX 38547703 Exonic hg19 NA BM315067 Out-of-frame Intra-chr p11.4 p11.4 113454 ChimerSeq ChiTaRs ChiTaRs LPGAT1-SIX1 LPGAT1 chr1 211950646 SIX1 chr14 61112817 Exonic hg19 NA CB267058 Out-of-frame Inter-chr q32.3 q23.1 Transcription factor 113455 ChimerSeq ChiTaRs ChiTaRs LAMB1-PITPNC1 LAMB1 chr7 107641404 PITPNC1 chr17 65408961 Exonic hg19 NA BG000078 Out-of-frame Inter-chr q31.1 q24.2 113456 ChimerSeq ChiTaRs ChiTaRs KIAA1524-KIAA1524 KIAA1524 chr3 108273338 KIAA1524 chr3 108278802 Exonic hg19 NA DN913008 Out-of-frame Intra-chr q13.13 q13.13 113457 ChimerSeq ChiTaRs ChiTaRs C6orf48-THAP1 C6orf48 chr6 3101139 THAP1 chr8 42698378 Exonic hg19 NA BI262348 Out-of-frame Inter-chr p11.21 Transcription factor 113458 ChimerSeq ChiTaRs ChiTaRs TNXB-ATF6B TNXB chr6 3468025 ATF6B chr6 3468074 Exonic hg19 NA AK000928 Out-of-frame Intra-chr Transcription factor 113459 ChimerSeq ChiTaRs ChiTaRs C2orf61-HIST1H2BC C2orf61 chr2 47387504 HIST1H2BC chr6 26123755 Exonic hg19 NA AI688098 Out-of-frame Inter-chr p22.2 113460 ChimerSeq ChiTaRs ChiTaRs PABPC1-MTMR14 PABPC1 chr8 101734251 MTMR14 chr3 9691293 Exonic hg19 NA DB265528 Out-of-frame Inter-chr q22.3 p25.3 113461 ChimerSeq ChiTaRs ChiTaRs PPP2R2A-GEMIN2 PPP2R2A chr8 26228038 GEMIN2 chr14 39597484 Exonic hg19 NA BF771688 Out-of-frame Inter-chr p21.2 q21.1 113462 ChimerSeq ChiTaRs ChiTaRs EBAG9-MALAT1 EBAG9 chr8 110577210 MALAT1 chr11 65266517 Exonic hg19 NA AW993668 Out-of-frame Inter-chr q23.2 q13.1 113463 ChimerSeq ChiTaRs ChiTaRs MCC-MCC MCC chr5 112359490 MCC chr5 112359224 Exonic hg19 NA AA593358 Out-of-frame Intra-chr q22.2 Tumor suppressor gene q22.2 Tumor suppressor gene 113464 ChimerSeq ChiTaRs ChiTaRs UBR5-MLL3 UBR5 chr8 103354769 MLL3 chr7 151860195 Exonic hg19 NA BF088408 Out-of-frame Inter-chr q22.3 Oncogene Tumor suppressor gene 113465 ChimerSeq ChiTaRs ChiTaRs PXDN-PXDN PXDN chr2 1637110 PXDN chr2 1637125 Exonic hg19 NA AI799528 Out-of-frame Intra-chr p25.3 p25.3 113466 ChimerSeq ChiTaRs ChiTaRs MKLN1-MKLN1 MKLN1 chr7 131181391 MKLN1 chr7 131180294 Exonic hg19 NA BQ185298 Out-of-frame Intra-chr q32.3 q32.3 113467 ChimerSeq ChiTaRs ChiTaRs RPS24-CTNND1 RPS24 chr10 79800454 CTNND1 chr11 57575661 Exonic hg19 NA AA535098 Out-of-frame Inter-chr q22.3 q12.1 Tumor suppressor gene 113468 ChimerSeq ChiTaRs ChiTaRs PPT2-ZMIZ1 PPT2 chr6 3484548 ZMIZ1 chr10 81075392 Exonic hg19 NA M85868 Out-of-frame Inter-chr q22.3 113469 ChimerSeq ChiTaRs ChiTaRs GATA2-LAMP2 GATA2 chr3 128198342 LAMP2 chrX 119563198 Exonic hg19 NA AI973078 Out-of-frame Inter-chr q21.3 Oncogene Transcription factor q24 113470 ChimerSeq ChiTaRs ChiTaRs LRCH3-LRCH3 LRCH3 chr3 197556075 LRCH3 chr3 197554162 Exonic hg19 NA AW806888 Out-of-frame Intra-chr q29 q29 113471 ChimerSeq ChiTaRs ChiTaRs C9orf78-SRSF11 C9orf78 chr9 132590057 SRSF11 chr1 70714426 Exonic hg19 NA AW589928 Out-of-frame Inter-chr q34.11 p31.1 113472 ChimerSeq ChiTaRs ChiTaRs USP47-USP47 USP47 chr11 11951662 USP47 chr11 11951599 Exonic hg19 NA AW389698 Out-of-frame Intra-chr p15.3 p15.3 113473 ChimerSeq ChiTaRs ChiTaRs ANKRD50-ANKRD50 ANKRD50 chr4 125621279 ANKRD50 chr4 125620532 Exonic hg19 NA CA336858 Out-of-frame Intra-chr q28.1 q28.1 113474 ChimerSeq ChiTaRs ChiTaRs NUP214-NUP214 NUP214 chr9 134049569 NUP214 chr9 134039254 Exonic hg19 NA BQ329628 Out-of-frame Intra-chr q34.13 Oncogene q34.13 Oncogene 113475 ChimerSeq ChiTaRs ChiTaRs ZSWIM6-GATAD2B ZSWIM6 chr5 60729715 GATAD2B chr1 153848756 Exonic hg19 NA AI392738 Out-of-frame Inter-chr q12.1 Transcription factor 113476 ChimerSeq ChiTaRs ChiTaRs ARNTL-ARNTL ARNTL chr11 13406694 ARNTL chr11 13406875 Exonic hg19 NA BU615448 Out-of-frame Intra-chr p15.3 Tumor suppressor gene Transcription factor p15.3 Tumor suppressor gene Transcription factor 113477 ChimerSeq ChiTaRs ChiTaRs FAM53C-FAM53C FAM53C chr5 137685401 FAM53C chr5 137684987 Exonic hg19 NA CN478638 Out-of-frame Intra-chr q31.2 q31.2 113478 ChimerSeq ChiTaRs ChiTaRs TMEM173-OLA1 TMEM173 chr5 138855223 OLA1 chr2 174939986 Exonic hg19 NA R39778 Out-of-frame Inter-chr q31.2 q31.1 113479 ChimerSeq ChiTaRs ChiTaRs SORBS2-PHLPP2 SORBS2 chr4 186615245 PHLPP2 chr16 71748346 Exonic hg19 NA BF921368 Out-of-frame Inter-chr q35.1 q22.2 Tumor suppressor gene 113480 ChimerSeq ChiTaRs ChiTaRs TTL-EIF6 TTL chr2 113281318 EIF6 chr20 33866772 Exonic hg19 NA BF815368 Out-of-frame Inter-chr q14.1 q11.22 113481 ChimerSeq ChiTaRs ChiTaRs OSGEPL1-OSGEPL1 OSGEPL1 chr2 190612911 OSGEPL1 chr2 190612442 Exonic hg19 NA BM906098 Out-of-frame Intra-chr q32.2 q32.2 113482 ChimerSeq ChiTaRs ChiTaRs MATR3-ALB MATR3 chr5 138632200 ALB chr4 74287034 Exonic hg19 NA AF116688 Out-of-frame Inter-chr q31.2 q13.3 113483 ChimerSeq ChiTaRs ChiTaRs ARF5-ARF5 ARF5 chr7 127230161 ARF5 chr7 127231071 Exonic hg19 NA BF765618 Out-of-frame Intra-chr q32.1 q32.1 113484 ChimerSeq ChiTaRs ChiTaRs RSRC1-ATP1A1 RSRC1 chr3 158261244 ATP1A1 chr1 116929994 Exonic hg19 NA DB226918 Out-of-frame Inter-chr q25.32 p13.1 113485 ChimerSeq ChiTaRs ChiTaRs ZC4H2-JOSD1 ZC4H2 chrX 64246332 JOSD1 chr22 39082519 Exonic hg19 NA BI458628 Out-of-frame Inter-chr q11.2 q13.1 113486 ChimerSeq ChiTaRs ChiTaRs KCNAB1-HNRNPUL2 KCNAB1 chr3 156009181 HNRNPUL2 chr11 62480221 Exonic hg19 NA DA412678 Out-of-frame Inter-chr q25.31 q12.3 113487 ChimerSeq ChiTaRs ChiTaRs SUV39H1-SUV39H1 SUV39H1 chrX 48557349 SUV39H1 chrX 48557345 Exonic hg19 NA L08238 Out-of-frame Intra-chr p11.23 p11.23 113488 ChimerSeq ChiTaRs ChiTaRs RERE-RERE RERE chr1 8670403 RERE chr1 8663487 Exonic hg19 NA AV762378 Out-of-frame Intra-chr p36.23 p36.23 113489 ChimerSeq ChiTaRs ChiTaRs PALMD-PALMD PALMD chr1 100159928 PALMD chr1 100154573 Exonic hg19 NA BU176678 Out-of-frame Intra-chr p21.2 p21.2 113490 ChimerSeq ChiTaRs ChiTaRs MLL5-MLL5 MLL5 chr7 104741923 MLL5 chr7 104742435 Exonic hg19 NA AA603058 Out-of-frame Intra-chr 113491 ChimerSeq ChiTaRs ChiTaRs NR4A3-ABL2 NR4A3 chr9 102586956 ABL2 chr1 179172005 Exonic hg19 NA AA613618 Out-of-frame Inter-chr q31.1 Tumor suppressor gene Transcription factor q25.2 TK:Abl Oncogene 113492 ChimerSeq ChiTaRs ChiTaRs TBC1D9-TBC1D9 TBC1D9 chr4 141612140 TBC1D9 chr4 141611369 Exonic hg19 NA CV414598 Out-of-frame Intra-chr q31.21 q31.21 113493 ChimerSeq ChiTaRs ChiTaRs EIF3H-EIF3H EIF3H chr8 117668233 EIF3H chr8 117668108 Exonic hg19 NA AW965128 Out-of-frame Intra-chr q24.11 q24.11 113494 ChimerSeq ChiTaRs ChiTaRs NT5C2-NT5C2 NT5C2 chr10 104953024 NT5C2 chr10 104952285 Exonic hg19 NA AW008648 Out-of-frame Intra-chr q24.33 q24.33 113495 ChimerSeq ChiTaRs ChiTaRs AFF1-AFF1 AFF1 chr4 87890042 AFF1 chr4 87915788 Exonic hg19 NA BF356988 Out-of-frame Intra-chr q21.3 Oncogene q21.3 Oncogene 113496 ChimerSeq ChiTaRs ChiTaRs ALCAM-ALCAM ALCAM chr3 105295744 ALCAM chr3 105295480 Exonic hg19 NA CN478968 Out-of-frame Intra-chr q13.11 q13.11 113497 ChimerSeq ChiTaRs ChiTaRs ORC2-ORC2 ORC2 chr2 201806002 ORC2 chr2 201807405 Exonic hg19 NA BQ335248 3'UTR-CDS Intra-chr q33.1 q33.1 113498 ChimerSeq ChiTaRs ChiTaRs C11orf49-HNRNPM C11orf49 chr11 47186054 HNRNPM chr19 8509879 Exonic hg19 NA AW167588 Out-of-frame Inter-chr p11.2 p13.2 113499 ChimerSeq ChiTaRs ChiTaRs GADD45A-FRA10AC1 GADD45A chr1 68153708 FRA10AC1 chr10 95429432 Exonic hg19 NA BM718128 Out-of-frame Inter-chr p31.3 Tumor suppressor gene q23.33 113500 ChimerSeq ChiTaRs ChiTaRs CNKSR3-GDE1 CNKSR3 chr6 154693997 GDE1 chr16 19513704 Exonic hg19 NA BQ360698 Out-of-frame Inter-chr q25.2 p12.3 113501 ChimerSeq ChiTaRs ChiTaRs SFXN5-GTPBP1 SFXN5 chr2 73297654 GTPBP1 chr22 39122009 Exonic hg19 NA CV322428 Out-of-frame Inter-chr p13.2 q13.1 113502 ChimerSeq ChiTaRs ChiTaRs ROBO1-OSGIN2 ROBO1 chr3 79203806 OSGIN2 chr8 90937095 Exonic hg19 NA BF959308 Out-of-frame Inter-chr p12.3 Tumor suppressor gene q21.3 113503 ChimerSeq ChiTaRs ChiTaRs C9-TEAD1 C9 chr5 39301401 TEAD1 chr11 12961391 Exonic hg19 NA BF990638 Out-of-frame Inter-chr p13.1 p15.3 Transcription factor 113504 ChimerSeq ChiTaRs ChiTaRs CXCL12-CXCL12 CXCL12 chr10 44865816 CXCL12 chr10 44865767 Exonic hg19 NA AA678668 Out-of-frame Intra-chr q11.21 Tumor suppressor gene q11.21 Tumor suppressor gene 113505 ChimerSeq ChiTaRs ChiTaRs AGXT2L2-STMN1 AGXT2L2 chr5 177656114 STMN1 chr1 26227059 Exonic hg19 NA AK123488 Out-of-frame Inter-chr p36.11 113506 ChimerSeq ChiTaRs ChiTaRs SH3RF1-PPP6R3 SH3RF1 chr4 170146287 PPP6R3 chr11 68262357 Exonic hg19 NA BF336568 Out-of-frame Inter-chr q33 q13.2 113507 ChimerSeq ChiTaRs ChiTaRs CHCHD3-CHCHD3 CHCHD3 chr7 132649704 CHCHD3 chr7 132649250 Exonic hg19 NA BE061868 Out-of-frame Intra-chr q33 Transcription factor q33 Transcription factor 113508 ChimerSeq ChiTaRs ChiTaRs LARS-PIGB LARS chr5 145503644 PIGB chr15 55638176 Exonic hg19 NA BF352298 Out-of-frame Inter-chr q32 q21.3 113509 ChimerSeq ChiTaRs ChiTaRs CHMP2B-LOC100124692 CHMP2B chr3 87299075 LOC100124692 chr7 141920481 Exonic hg19 NA AW812978 Out-of-frame Inter-chr p11.2 113510 ChimerSeq ChiTaRs ChiTaRs CACNA1D-NOX1 CACNA1D chr3 53617676 NOX1 chrX 100110469 Exonic hg19 NA BF755778 Out-of-frame Inter-chr p21.1 q22.1 113511 ChimerSeq ChiTaRs ChiTaRs FYN-CEACAM5 FYN chr6 112073117 CEACAM5 chr19 42224875 Exonic hg19 NA AW844098 Out-of-frame Inter-chr q21 TK:Src q13.2 113512 ChimerSeq ChiTaRs ChiTaRs TBL1XR1-ENPP2 TBL1XR1 chr3 176904018 ENPP2 chr8 120643145 Exonic hg19 NA AK022268 Out-of-frame Inter-chr q26.32 q24.12 113513 ChimerSeq ChiTaRs ChiTaRs HPCAL1-HPCAL1 HPCAL1 chr2 10567727 HPCAL1 chr2 10567607 Exonic hg19 NA AW089688 Out-of-frame Intra-chr p25.1 p25.1 113514 ChimerSeq ChiTaRs ChiTaRs PRRC2C-TGOLN2 PRRC2C chr1 171526604 TGOLN2 chr2 85548033 Exonic hg19 NA BI020978 Out-of-frame Inter-chr q24.3 p11.2 113515 ChimerSeq ChiTaRs ChiTaRs ZNF483-DHFR ZNF483 chr9 114311891 DHFR chr5 79946785 Exonic hg19 NA AK123238 Out-of-frame Inter-chr q31.3 Transcription factor q14.1 113516 ChimerSeq ChiTaRs ChiTaRs IQSEC1-UCHL1 IQSEC1 chr3 12939128 UCHL1 chr4 41270053 Exonic hg19 NA CK023998 Out-of-frame Inter-chr p25.2 p13 Tumor suppressor gene 113517 ChimerSeq ChiTaRs ChiTaRs LRP4-C14orf37 LRP4 chr11 46940193 C14orf37 chr14 58727700 Exonic hg19 NA BC110808 Out-of-frame Inter-chr p11.2 q23.1 113518 ChimerSeq ChiTaRs ChiTaRs TKT-TKT TKT chr3 53259813 TKT chr3 53259664 Exonic hg19 NA BI094438 Out-of-frame Intra-chr p21.1 Tumor suppressor gene p21.1 Tumor suppressor gene 113519 ChimerSeq ChiTaRs ChiTaRs RFC2-RFC2 RFC2 chr7 73657878 RFC2 chr7 73660994 Exonic hg19 NA BQ189198 Out-of-frame Intra-chr q11.23 q11.23 113520 ChimerSeq ChiTaRs ChiTaRs PTGS1-GNAS PTGS1 chr9 125155344 GNAS chr20 57470930 Exonic hg19 NA AA773408 Out-of-frame Inter-chr q33.2 q13.32 Oncogene 113521 ChimerSeq ChiTaRs ChiTaRs QSER1-QSER1 QSER1 chr11 32999230 QSER1 chr11 32999215 Exonic hg19 NA BG029448 Out-of-frame Intra-chr p13 p13 113522 ChimerSeq ChiTaRs ChiTaRs BRPF1-AP3M1 BRPF1 chr3 9776286 AP3M1 chr10 75882158 Exonic hg19 NA BE082848 Out-of-frame Inter-chr p25.3 q22.2 113523 ChimerSeq ChiTaRs ChiTaRs KIAA0020-KIAA0020 KIAA0020 chr9 2811390 KIAA0020 chr9 2810681 Exonic hg19 NA BF328518 Out-of-frame Intra-chr 113524 ChimerSeq ChiTaRs ChiTaRs LRP1B-DMD LRP1B chr2 142409708 DMD chrX 32925853 Exonic hg19 NA BF325818 Out-of-frame Inter-chr q22.2 Oncogene Tumor suppressor gene p21.1 Tumor suppressor gene 113525 ChimerSeq ChiTaRs ChiTaRs PPP1R18-PPP1R18 PPP1R18 chr6 2156351 PPP1R18 chr6 1976518 Exonic hg19 NA CA430558 Out-of-frame Intra-chr p21.33 p21.33 113526 ChimerSeq ChiTaRs ChiTaRs LINC00340-SERPINB13 LINC00340 chr6 21703485 SERPINB13 chr18 61255847 Exonic hg19 NA BE142318 Out-of-frame Inter-chr q21.33 113527 ChimerSeq ChiTaRs ChiTaRs RPS7-TONSL RPS7 chr2 3624177 TONSL chr8 145661993 Exonic hg19 NA U16258 Out-of-frame Inter-chr p25.3 q24.3 113528 ChimerSeq ChiTaRs ChiTaRs AZGP1-PCSK5 AZGP1 chr7 99564422 PCSK5 chr9 78808391 Exonic hg19 NA AI810898 Out-of-frame Inter-chr q22.1 Tumor suppressor gene q21.13 113529 ChimerSeq ChiTaRs ChiTaRs YAE1D1-YAE1D1 YAE1D1 chr7 39612034 YAE1D1 chr7 39612062 Exonic hg19 NA AW819978 Out-of-frame Intra-chr p14.1 p14.1 113530 ChimerSeq ChiTaRs ChiTaRs CELF2-RARA CELF2 chr10 11233631 RARA chr17 38556534 Exonic hg19 NA T12388 Out-of-frame Inter-chr p14 q21.2 Oncogene Transcription factor 113531 ChimerSeq ChiTaRs ChiTaRs STEAP3-MT1DP STEAP3 chr2 119994370 MT1DP chr16 56678412 Exonic hg19 NA AV649558 Out-of-frame Inter-chr q14.2 q13 Tumor suppressor gene 113532 ChimerSeq ChiTaRs ChiTaRs TAF8-CRK TAF8 chr6 42047733 CRK chr17 1326092 Exonic hg19 NA AI969618 Out-of-frame Inter-chr p21.1 p13.3 113533 ChimerSeq ChiTaRs ChiTaRs CD74-EPC2 CD74 chr5 149781578 EPC2 chr2 149539312 Exonic hg19 NA BE817748 Out-of-frame Inter-chr q33.1 q23.1 113534 ChimerSeq ChiTaRs ChiTaRs RYR2-RYR2 RYR2 chr1 237285693 RYR2 chr1 237276778 Exonic hg19 NA AW904648 Out-of-frame Intra-chr q43 q43 113535 ChimerSeq ChiTaRs ChiTaRs MB21D2-MAP1S MB21D2 chr3 192635626 MAP1S chr19 17836673 Exonic hg19 NA DB148428 Out-of-frame Inter-chr q29 p13.11 113536 ChimerSeq ChiTaRs ChiTaRs ACYP2-ACYP2 ACYP2 chr2 54386478 ACYP2 chr2 54385792 Exonic hg19 NA DW435378 Out-of-frame Intra-chr p16.2 p16.2 113537 ChimerSeq ChiTaRs ChiTaRs PALLD-RPL23 PALLD chr4 169849560 RPL23 chr17 37006342 Exonic hg19 NA AA045738 Out-of-frame Inter-chr q32.3 q12 113538 ChimerSeq ChiTaRs ChiTaRs PLEKHA6-TSNARE1 PLEKHA6 chr1 204218803 TSNARE1 chr8 143400262 Exonic hg19 NA BG951558 Out-of-frame Inter-chr q32.1 q24.3 113539 ChimerSeq ChiTaRs ChiTaRs ADAM12-PARP14 ADAM12 chr10 127914907 PARP14 chr3 122407515 Exonic hg19 NA BF369128 Out-of-frame Inter-chr q26.2 q21.1 113540 ChimerSeq ChiTaRs ChiTaRs ENTPD1-DGKH ENTPD1 chr10 97602931 DGKH chr13 42811785 Exonic hg19 NA W80598 Out-of-frame Inter-chr q24.1 q14.11 113541 ChimerSeq ChiTaRs ChiTaRs INTS1-SQSTM1 INTS1 chr7 1544018 SQSTM1 chr5 179263873 Exonic hg19 NA AX748318 5'UTR-3'UTR Inter-chr p22.3 q35.3 113542 ChimerSeq ChiTaRs ChiTaRs TEC-ASB3 TEC chr4 48139351 ASB3 chr2 54005455 Exonic hg19 NA BF795018 Out-of-frame Inter-chr p11 TK:Tec Tumor suppressor gene p16.2 113543 ChimerSeq ChiTaRs ChiTaRs PEX10-PEX10 PEX10 chr1 2338880 PEX10 chr1 2338158 Exonic hg19 NA BF913228 Out-of-frame Intra-chr p36.32 p36.32 113544 ChimerSeq ChiTaRs ChiTaRs RARRES3-CDC42SE1 RARRES3 chr11 63313913 CDC42SE1 chr1 151025565 Exonic hg19 NA BE711178 Out-of-frame Inter-chr q12.3 Tumor suppressor gene q21.3 113545 ChimerSeq ChiTaRs ChiTaRs AIG1-CTNNA2 AIG1 chr6 143660150 CTNNA2 chr2 80335950 Exonic hg19 NA AW576718 Out-of-frame Inter-chr q24.2 p12 Tumor suppressor gene 113546 ChimerSeq ChiTaRs ChiTaRs C5orf15-PCLO C5orf15 chr5 133301054 PCLO chr7 82764114 Exonic hg19 NA CV426848 Out-of-frame Inter-chr q31.1 q21.11 113547 ChimerSeq ChiTaRs ChiTaRs ACPP-PAFAH1B1 ACPP chr3 132077108 PAFAH1B1 chr17 2578664 Exonic hg19 NA BE768768 Out-of-frame Inter-chr q22.1 p13.3 Tumor suppressor gene 113548 ChimerSeq ChiTaRs ChiTaRs CAMK2G-CAMK2G CAMK2G chr10 75574007 CAMK2G chr10 75612023 Exonic hg19 NA AU119968 Out-of-frame Intra-chr q22.2 q22.2 113549 ChimerSeq ChiTaRs ChiTaRs SPEN-IRF3 SPEN chr1 16262046 IRF3 chr19 50165210 Exonic hg19 NA BQ320088 Out-of-frame Inter-chr p36.21 Transcription factor q13.33 Tumor suppressor gene Transcription factor 113550 ChimerSeq ChiTaRs ChiTaRs PEX14-PEX14 PEX14 chr1 10690740 PEX14 chr1 10690719 Exonic hg19 NA BE892938 Out-of-frame Intra-chr p36.22 p36.22 113551 ChimerSeq ChiTaRs ChiTaRs NEFM-NEFM NEFM chr8 24775674 NEFM chr8 24775206 Exonic hg19 NA W27448 Out-of-frame Intra-chr p21.2 p21.2 113552 ChimerSeq ChiTaRs ChiTaRs KCNMA1-KCNMA1 KCNMA1 chr10 79197103 KCNMA1 chr10 79209075 Exonic hg19 NA BE145278 Out-of-frame Intra-chr q22.3 q22.3 113553 ChimerSeq ChiTaRs ChiTaRs LRRC7-MLLT1 LRRC7 chr1 70251670 MLLT1 chr19 6210643 Exonic hg19 NA BQ367648 Out-of-frame Inter-chr p31.1 p13.3 113554 ChimerSeq ChiTaRs ChiTaRs MPPED2-MAP1S MPPED2 chr11 30605781 MAP1S chr19 17844000 Exonic hg19 NA AL037898 Out-of-frame Inter-chr p14.1 p13.11 113555 ChimerSeq ChiTaRs ChiTaRs AASDH-IRF3 AASDH chr4 57204721 IRF3 chr19 50165205 Exonic hg19 NA BG315188 Out-of-frame Inter-chr q12 q13.33 Tumor suppressor gene Transcription factor 113556 ChimerSeq ChiTaRs ChiTaRs CWF19L1-TAPBP CWF19L1 chr10 101992222 TAPBP chr6 4501042 Exonic hg19 NA CA425588 Out-of-frame Inter-chr q24.31 113557 ChimerSeq ChiTaRs ChiTaRs CXCL14-CSAD CXCL14 chr5 134907529 CSAD chr12 53569583 Exonic hg19 NA BX093038 Out-of-frame Inter-chr q31.1 Tumor suppressor gene q13.13 113558 ChimerSeq ChiTaRs ChiTaRs NUDT16-ASXL1 NUDT16 chr3 131103268 ASXL1 chr20 31017764 Exonic hg19 NA BQ323368 Out-of-frame Inter-chr q22.1 q11.21 Oncogene Tumor suppressor gene 113559 ChimerSeq ChiTaRs ChiTaRs ANKRD28-LMNB1 ANKRD28 chr3 15736279 LMNB1 chr5 126172612 Exonic hg19 NA AI133188 Out-of-frame Inter-chr p25.1 q23.2 113560 ChimerSeq ChiTaRs ChiTaRs IGFBP5-IGFBP5 IGFBP5 chr2 217541219 IGFBP5 chr2 217540985 Exonic hg19 NA CN287078 Out-of-frame Intra-chr q35 Tumor suppressor gene q35 Tumor suppressor gene 113561 ChimerSeq ChiTaRs ChiTaRs AGPAT4-AGPAT4 AGPAT4 chr6 161551829 AGPAT4 chr6 161551334 Exonic hg19 NA BU073418 Out-of-frame Intra-chr q26 q26 113562 ChimerSeq ChiTaRs ChiTaRs UBXN4-UBXN4 UBXN4 chr2 136527364 UBXN4 chr2 136513132 Exonic hg19 NA CB242758 Out-of-frame Intra-chr q21.3 q21.3 113563 ChimerSeq ChiTaRs ChiTaRs COPB2-TMEM106C COPB2 chr3 139108499 TMEM106C chr12 48362070 Exonic hg19 NA AI541208 Out-of-frame Inter-chr q23 q13.11 113564 ChimerSeq ChiTaRs ChiTaRs DOK2-DOK2 DOK2 chr8 21766752 DOK2 chr8 21766386 Exonic hg19 NA BX102028 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.3 Tumor suppressor gene 113565 ChimerSeq ChiTaRs ChiTaRs MTX2-RPL8 MTX2 chr2 177178139 RPL8 chr8 146015154 Exonic hg19 NA BC015588 Out-of-frame Inter-chr q31.1 q24.3 113566 ChimerSeq ChiTaRs ChiTaRs ELMO1-APOL3 ELMO1 chr7 37043586 APOL3 chr22 36536542 Exonic hg19 NA BF995818 Out-of-frame Inter-chr p14.1 q12.3 113567 ChimerSeq ChiTaRs ChiTaRs NRBF2-RAPH1 NRBF2 chr10 64896602 RAPH1 chr2 204355155 Exonic hg19 NA BF986118 Out-of-frame Inter-chr q21.3 q33.2 113568 ChimerSeq ChiTaRs ChiTaRs ALB-ALB ALB chr4 74284021 ALB chr4 74279160 Exonic hg19 NA AI110818 Out-of-frame Intra-chr q13.3 q13.3 113569 ChimerSeq ChiTaRs ChiTaRs PPM1K-LRPPRC PPM1K chr4 89182454 LRPPRC chr2 44115437 Exonic hg19 NA BF090448 Out-of-frame Inter-chr q22.1 p21 113570 ChimerSeq ChiTaRs ChiTaRs XIRP2-XIRP2 XIRP2 chr2 168101073 XIRP2 chr2 168100985 Exonic hg19 NA AA179868 Out-of-frame Intra-chr q24.3 q24.3 113571 ChimerSeq ChiTaRs ChiTaRs SMAP2-CCT7 SMAP2 chr1 40887835 CCT7 chr2 73479862 Exonic hg19 NA BM915408 Out-of-frame Inter-chr p34.2 p13.2 113572 ChimerSeq ChiTaRs ChiTaRs PCBP4-PCBP4 PCBP4 chr3 52001483 PCBP4 chr3 51999688 Exonic hg19 NA AA700998 Out-of-frame Intra-chr p21.2 p21.2 113573 ChimerSeq ChiTaRs ChiTaRs DHX9-FARS2 DHX9 chr1 182850466 FARS2 chr6 5750843 Exonic hg19 NA BF957208 Out-of-frame Inter-chr q25.3 p25.1 113574 ChimerSeq ChiTaRs ChiTaRs STX5-CFLAR STX5 chr11 62591707 CFLAR chr2 202000636 Exonic hg19 NA BF734648 Out-of-frame Inter-chr q12.3 q33.1 113575 ChimerSeq ChiTaRs ChiTaRs TMEM2-TMEM2 TMEM2 chr9 74341963 TMEM2 chr9 74341909 Exonic hg19 NA BE079598 Out-of-frame Intra-chr q21.13 q21.13 113576 ChimerSeq ChiTaRs ChiTaRs LARS-WAPAL LARS chr5 145533376 WAPAL chr10 88206058 Exonic hg19 NA BF752458 Out-of-frame Inter-chr q32 113577 ChimerSeq ChiTaRs ChiTaRs VGLL3-PBXIP1 VGLL3 chr3 87000599 PBXIP1 chr1 154916578 Exonic hg19 NA BG621848 Out-of-frame Inter-chr p12.1 q21.3 113578 ChimerSeq ChiTaRs ChiTaRs GTF2I-GTF2I GTF2I chr7 74134894 GTF2I chr7 74133731 Exonic hg19 NA DW409398 Out-of-frame Intra-chr q11.23 Transcription factor q11.23 Transcription factor 113579 ChimerSeq ChiTaRs ChiTaRs MIR548G-F2R MIR548G chr3 99516939 F2R chr5 76030883 Exonic hg19 NA BU677108 Out-of-frame Inter-chr q31.22 q13.3 113580 ChimerSeq ChiTaRs ChiTaRs NDRG1-LPAR1 NDRG1 chr8 134309495 LPAR1 chr9 113734408 Exonic hg19 NA DA327368 Out-of-frame Inter-chr q24.22 Tumor suppressor gene q31.3 113581 ChimerSeq ChiTaRs ChiTaRs B4GALT1-B4GALT1 B4GALT1 chr9 33110908 B4GALT1 chr9 33110918 Exonic hg19 NA BE939488 Out-of-frame Intra-chr p21.1 p21.1 113582 ChimerSeq ChiTaRs ChiTaRs KCTD7-C6orf62 KCTD7 chr7 66105704 C6orf62 chr6 24711405 Exonic hg19 NA AA131458 Out-of-frame Inter-chr q11.21 p22.3 113583 ChimerSeq ChiTaRs ChiTaRs HNRNPK-MYOM2 HNRNPK chr9 86592673 MYOM2 chr8 2092964 Exonic hg19 NA BF930538 Out-of-frame Inter-chr q21.32 p23.3 113584 ChimerSeq ChiTaRs ChiTaRs PAX6-PAX6 PAX6 chr11 31832870 PAX6 chr11 31828397 Exonic hg19 NA W21798 Out-of-frame Intra-chr p13 Tumor suppressor gene Transcription factor p13 Tumor suppressor gene Transcription factor 113585 ChimerSeq ChiTaRs ChiTaRs HIST1H2BE-PGM3 HIST1H2BE chr6 26184456 PGM3 chr6 83900698 Exonic hg19 NA BP314848 Out-of-frame Intra-chr p22.2 q14.1 113586 ChimerSeq ChiTaRs ChiTaRs GHITM-MUC5B GHITM chr10 85903812 MUC5B chr11 1263615 Exonic hg19 NA BQ320008 Out-of-frame Inter-chr q23.1 p15.5 113587 ChimerSeq ChiTaRs ChiTaRs CIZ1-CIZ1 CIZ1 chr9 130928454 CIZ1 chr9 130952684 Exonic hg19 NA CV803618 Out-of-frame Intra-chr q34.11 Tumor suppressor gene q34.11 Tumor suppressor gene 113588 ChimerSeq ChiTaRs ChiTaRs SMURF1-UAP1 SMURF1 chr7 98647605 UAP1 chr1 162566157 Exonic hg19 NA AL042818 Out-of-frame Inter-chr q23.3 113589 ChimerSeq ChiTaRs ChiTaRs ISG20L2-ISG20L2 ISG20L2 chr1 156697050 ISG20L2 chr1 156692911 Exonic hg19 NA AW848738 Out-of-frame Intra-chr q23.1 q23.1 113590 ChimerSeq ChiTaRs ChiTaRs KPNA4-LIG1 KPNA4 chr3 160214275 LIG1 chr19 48623781 Exonic hg19 NA AW391238 Out-of-frame Inter-chr q25.33 q13.33 Tumor suppressor gene 113591 ChimerSeq ChiTaRs ChiTaRs SLC8A1-SLC8A1 SLC8A1 chr2 40657444 SLC8A1 chr2 40655613 Exonic hg19 NA AW452398 5'UTR-CDS Intra-chr p22.1 p22.1 113592 ChimerSeq ChiTaRs ChiTaRs CLU-ZNF238 CLU chr8 27455605 ZNF238 chr1 244217204 Exonic hg19 NA AI634048 Out-of-frame Inter-chr p21.1 Tumor suppressor gene Tumor suppressor gene 113593 ChimerSeq ChiTaRs ChiTaRs KCMF1-KCMF1 KCMF1 chr2 85280895 KCMF1 chr2 85280413 Exonic hg19 NA CN478588 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Transcription factor 113594 ChimerSeq ChiTaRs ChiTaRs MTCH1-HIVEP1 MTCH1 chr6 36936123 HIVEP1 chr6 12058443 Exonic hg19 NA CN305548 Out-of-frame Intra-chr p21.2 p24.1 Tumor suppressor gene Transcription factor 113595 ChimerSeq ChiTaRs ChiTaRs FHIT-SLC30A6 FHIT chr3 60507634 SLC30A6 chr2 32446494 Exonic hg19 NA BX951598 Out-of-frame Inter-chr p14.2 Tumor suppressor gene p22.3 113596 ChimerSeq ChiTaRs ChiTaRs NBPF11-NBPF14 NBPF11 chr1 147931873 NBPF14 chr1 145004781 Exonic hg19 NA BC018768 Out-of-frame Intra-chr q21.2 q21.2 113597 ChimerSeq ChiTaRs ChiTaRs LINC00337-CHCHD3 LINC00337 chr1 6299473 CHCHD3 chr7 132649873 Exonic hg19 NA R08848 Out-of-frame Inter-chr p36.31 q33 Transcription factor 113598 ChimerSeq ChiTaRs ChiTaRs MGST3-SPOP MGST3 chr1 165621237 SPOP chr17 47677802 Exonic hg19 NA DW407758 Out-of-frame Inter-chr q24.1 q21.33 Oncogene Tumor suppressor gene 113599 ChimerSeq ChiTaRs ChiTaRs SQSTM1-SQSTM1 SQSTM1 chr5 179263581 SQSTM1 chr5 179252144 Exonic hg19 NA CK003998 Out-of-frame Intra-chr q35.3 q35.3 113600 ChimerSeq ChiTaRs ChiTaRs GTF2I-GTF2I GTF2I chr7 74078006 GTF2I chr7 74097747 Exonic hg19 NA BE172158 Out-of-frame Intra-chr q11.23 Transcription factor q11.23 Transcription factor 113601 ChimerSeq ChiTaRs ChiTaRs RPL10-POLA2 RPL10 chrX 153629254 POLA2 chr11 65029451 Exonic hg19 NA BC015618 Out-of-frame Inter-chr q28 Tumor suppressor gene q13.1 113602 ChimerSeq ChiTaRs ChiTaRs ATP5I-ABCA11P ATP5I chr4 667766 ABCA11P chr4 437729 Exonic hg19 NA DB215628 Out-of-frame Intra-chr p16.3 p16.3 113603 ChimerSeq ChiTaRs ChiTaRs ADARB2-PTPN7 ADARB2 chr10 1442151 PTPN7 chr1 202117308 Exonic hg19 NA BI837348 Out-of-frame Inter-chr p15.3 q32.1 113604 ChimerSeq ChiTaRs ChiTaRs GOLIM4-BHMT GOLIM4 chr3 167749781 BHMT chr5 78427550 Exonic hg19 NA EB362708 Out-of-frame Inter-chr q26.2 q14.1 113605 ChimerSeq ChiTaRs ChiTaRs UBR4-FOXK1 UBR4 chr1 19422058 FOXK1 chr7 4804976 Exonic hg19 NA BE715858 Out-of-frame Inter-chr p36.13 p22.1 Transcription factor 113606 ChimerSeq ChiTaRs ChiTaRs TNS3-PAPPA2 TNS3 chr7 47342999 PAPPA2 chr1 176734800 Exonic hg19 NA AA367908 Out-of-frame Inter-chr p12.3 q25.2 113607 ChimerSeq ChiTaRs ChiTaRs ECE1-PTPN23 ECE1 chr1 21543878 PTPN23 chr3 47454194 Exonic hg19 NA R00228 Out-of-frame Inter-chr p36.12 p21.31 Tumor suppressor gene 113608 ChimerSeq ChiTaRs ChiTaRs TEX261-TEX261 TEX261 chr2 71214522 TEX261 chr2 71214694 Exonic hg19 NA BE698518 Out-of-frame Intra-chr p13.3 p13.3 113609 ChimerSeq ChiTaRs ChiTaRs LOC646329-LOC646329 LOC646329 chr7 130568715 LOC646329 chr7 130568363 Exonic hg19 NA AW817508 Out-of-frame Intra-chr 113610 ChimerSeq ChiTaRs ChiTaRs OCIAD1-ZBTB43 OCIAD1 chr4 48859381 ZBTB43 chr9 129586830 Exonic hg19 NA BE172078 Out-of-frame Inter-chr p11 q33.3 Transcription factor 113611 ChimerSeq ChiTaRs ChiTaRs SPP2-HBG1 SPP2 chr2 234971785 HBG1 chr11 5269503 Exonic hg19 NA AF130098 Out-of-frame Inter-chr q37.1 p15.4 113612 ChimerSeq ChiTaRs ChiTaRs SRSF11-CAMTA1 SRSF11 chr1 70716350 CAMTA1 chr1 7674450 Exonic hg19 NA BU615278 Out-of-frame Intra-chr p31.1 p36.31 Tumor suppressor gene Transcription factor 113613 ChimerSeq ChiTaRs ChiTaRs PIK3CD-CDS2 PIK3CD chr1 9784264 CDS2 chr20 5173732 Exonic hg19 NA BI020398 Out-of-frame Inter-chr p36.22 Oncogene p12.3 113614 ChimerSeq ChiTaRs ChiTaRs PPIP5K2-TMEM161B PPIP5K2 chr5 102509275 TMEM161B chr5 87534276 Exonic hg19 NA AW999008 Out-of-frame Intra-chr q21.1 q14.3 113615 ChimerSeq ChiTaRs ChiTaRs STOM-PRRC2C STOM chr9 124116932 PRRC2C chr1 171491821 Exonic hg19 NA CF595948 Out-of-frame Inter-chr q33.2 q24.3 113616 ChimerSeq ChiTaRs ChiTaRs DAB1-SSH2 DAB1 chr1 58814413 SSH2 chr17 28092339 Exonic hg19 NA AW378958 Out-of-frame Inter-chr p32.1 q11.2 113617 ChimerSeq ChiTaRs ChiTaRs HINT1-USP34 HINT1 chr5 130500901 USP34 chr2 61415659 Exonic hg19 NA DA997458 Out-of-frame Inter-chr q23.3 Tumor suppressor gene p15 113618 ChimerSeq ChiTaRs ChiTaRs ADD1-RRM2 ADD1 chr4 2931788 RRM2 chr2 10263875 Exonic hg19 NA BQ379268 Out-of-frame Inter-chr p16.3 p25.1 113619 ChimerSeq ChiTaRs ChiTaRs RPP30-RPP30 RPP30 chr10 92663251 RPP30 chr10 92662585 Exonic hg19 NA BM719638 Out-of-frame Intra-chr q23.31 q23.31 113620 ChimerSeq ChiTaRs ChiTaRs SIKE1-SIKE1 SIKE1 chr1 115322581 SIKE1 chr1 115322668 Exonic hg19 NA BQ189708 Out-of-frame Intra-chr p13.2 p13.2 113621 ChimerSeq ChiTaRs ChiTaRs PPP1R12B-PPP1R12B PPP1R12B chr1 202553389 PPP1R12B chr1 202553431 Exonic hg19 NA BF822358 Out-of-frame Intra-chr q32.1 q32.1 113622 ChimerSeq ChiTaRs ChiTaRs PAPD7-PAPD7 PAPD7 chr5 6722385 PAPD7 chr5 6722675 Exonic hg19 NA BF378768 Out-of-frame Intra-chr p15.31 p15.31 113623 ChimerSeq ChiTaRs ChiTaRs CHPF2-CHPF2 CHPF2 chr7 150934338 CHPF2 chr7 150933805 Exonic hg19 NA BQ309918 Out-of-frame Intra-chr q36.1 q36.1 113624 ChimerSeq ChiTaRs ChiTaRs MYOF-FBN1 MYOF chr10 95106158 FBN1 chr15 48702953 Exonic hg19 NA BG007318 Out-of-frame Inter-chr q23.33 q21.1 113625 ChimerSeq ChiTaRs ChiTaRs FAM120B-GLTSCR2 FAM120B chr6 170669583 GLTSCR2 chr19 48248827 Exonic hg19 NA BC021558 Out-of-frame Inter-chr Tumor suppressor gene 113626 ChimerSeq ChiTaRs ChiTaRs NAP1L4-NAP1L4 NAP1L4 chr11 3003681 NAP1L4 chr11 3003172 Exonic hg19 NA AW835788 Out-of-frame Intra-chr 113627 ChimerSeq ChiTaRs ChiTaRs PPP2R2D-PPP2R2D PPP2R2D chr10 133764031 PPP2R2D chr10 133763030 Exonic hg19 NA BI020668 Out-of-frame Intra-chr q26.3 q26.3 113628 ChimerSeq ChiTaRs ChiTaRs NAA50-RPL11 NAA50 chr3 113465099 RPL11 chr1 24022297 Exonic hg19 NA BU598868 Out-of-frame Inter-chr q13.31 p36.11 Tumor suppressor gene 113629 ChimerSeq ChiTaRs ChiTaRs PTPN13-PTPN13 PTPN13 chr4 87610347 PTPN13 chr4 87556404 Exonic hg19 NA U12128 CDS-5'UTR Intra-chr q21.3 Tumor suppressor gene q21.3 Tumor suppressor gene 113630 ChimerSeq ChiTaRs ChiTaRs SEMA3C-ANAPC7 SEMA3C chr7 80423394 ANAPC7 chr12 110824133 Exonic hg19 NA AW993838 Out-of-frame Inter-chr q21.11 q24.11 113631 ChimerSeq ChiTaRs ChiTaRs BRD2-BRD2 BRD2 chr6 4423230 BRD2 chr6 4420768 Exonic hg19 NA BQ300318 Out-of-frame Intra-chr Atypical:BRD Atypical:BRD 113632 ChimerSeq ChiTaRs ChiTaRs SELENBP1-HCFC1 SELENBP1 chr1 151336954 HCFC1 chrX 153221112 Exonic hg19 NA BE646218 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q28 113633 ChimerSeq ChiTaRs ChiTaRs SNX4-SNX4 SNX4 chr3 125191702 SNX4 chr3 125193387 Exonic hg19 NA DW428338 Out-of-frame Intra-chr q21.2 q21.2 113634 ChimerSeq ChiTaRs ChiTaRs ATP2C1-PARVA ATP2C1 chr3 130653379 PARVA chr11 12496506 Exonic hg19 NA BF884558 Out-of-frame Inter-chr q22.1 p15.3 113635 ChimerSeq ChiTaRs ChiTaRs ACAA1-ACAA1 ACAA1 chr3 38170880 ACAA1 chr3 38168057 Exonic hg19 NA BF859008 Out-of-frame Intra-chr p22.2 p22.2 113636 ChimerSeq ChiTaRs ChiTaRs CLRN1-AS1-GRIP2 CLRN1-AS1 chr3 150772319 GRIP2 chr3 14548308 Exonic hg19 NA DA718478 Out-of-frame Intra-chr q25.1 p25.1 Tumor suppressor gene 113637 ChimerSeq ChiTaRs ChiTaRs REEP3-MSH2 REEP3 chr10 65383833 MSH2 chr2 47800945 Exonic hg19 NA BE501128 Out-of-frame Inter-chr q21.3 p21 Oncogene Tumor suppressor gene 113638 ChimerSeq ChiTaRs ChiTaRs ENAH-ENAH ENAH chr1 225683723 ENAH chr1 225683535 Exonic hg19 NA BM800638 Out-of-frame Intra-chr q42.12 q42.12 113639 ChimerSeq ChiTaRs ChiTaRs LOC550112-NR2C2 LOC550112 chr4 68917871 NR2C2 chr3 15088507 Exonic hg19 NA AW892618 Out-of-frame Inter-chr p25.1 Tumor suppressor gene Transcription factor 113640 ChimerSeq ChiTaRs ChiTaRs LIN7C-CD55 LIN7C chr11 27528322 CD55 chr1 207510125 Exonic hg19 NA DW408228 Out-of-frame Inter-chr p14.1 q32.2 113641 ChimerSeq ChiTaRs ChiTaRs HIVEP3-HIVEP3 HIVEP3 chr1 41972877 HIVEP3 chr1 41973085 Exonic hg19 NA AI813558 Out-of-frame Intra-chr p34.2 Tumor suppressor gene Transcription factor p34.2 Tumor suppressor gene Transcription factor 113642 ChimerSeq ChiTaRs ChiTaRs GRSF1-COL3A1 GRSF1 chr4 71686580 COL3A1 chr2 189855071 Exonic hg19 NA AW081998 Out-of-frame Inter-chr q13.3 q32.2 113643 ChimerSeq ChiTaRs ChiTaRs GMDS-PARVA GMDS chr6 1905260 PARVA chr11 12550905 Exonic hg19 NA BQ897638 Out-of-frame Inter-chr p25.3 p15.3 113644 ChimerSeq ChiTaRs ChiTaRs GSTM5-GSTM4 GSTM5 chr1 110256332 GSTM4 chr1 110199002 Exonic hg19 NA AV701798 Out-of-frame Intra-chr p13.3 p13.3 113645 ChimerSeq ChiTaRs ChiTaRs SETDB1-CFHR4 SETDB1 chr1 150917580 CFHR4 chr1 196801204 Exonic hg19 NA AV661668 Out-of-frame Intra-chr q21.3 Transcription factor q31.3 113646 ChimerSeq ChiTaRs ChiTaRs XPO1-TRAPPC9 XPO1 chr2 61715962 TRAPPC9 chr8 141227840 Exonic hg19 NA N53198 Out-of-frame Inter-chr p15 Oncogene q24.3 113647 ChimerSeq ChiTaRs ChiTaRs POLR2B-IGF2BP3 POLR2B chr4 57897082 IGF2BP3 chr7 23419096 Exonic hg19 NA W81478 Out-of-frame Inter-chr q12 p15.3 113648 ChimerSeq ChiTaRs ChiTaRs GRAMD3-GRAMD3 GRAMD3 chr5 125829608 GRAMD3 chr5 125828986 Exonic hg19 NA CA312008 Out-of-frame Intra-chr q23.2 q23.2 113649 ChimerSeq ChiTaRs ChiTaRs MBNL1-MBNL1 MBNL1 chr3 152048684 MBNL1 chr3 152046217 Exonic hg19 NA BG778978 Out-of-frame Intra-chr q25.1 q25.1 113650 ChimerSeq ChiTaRs ChiTaRs PIK3CD-PIK3CD PIK3CD chr1 9788663 PIK3CD chr1 9788156 Exonic hg19 NA AV739808 Out-of-frame Intra-chr p36.22 Oncogene p36.22 Oncogene 113651 ChimerSeq ChiTaRs ChiTaRs CNOT6L-AKT3 CNOT6L chr4 78636368 AKT3 chr1 244006504 Exonic hg19 NA AA479228 Out-of-frame Inter-chr q21.1 AGC:Akt Oncogene 113652 ChimerSeq ChiTaRs ChiTaRs PSD3-MYO1D PSD3 chr8 18743734 MYO1D chr17 30831585 Exonic hg19 NA AK057818 Out-of-frame Inter-chr p22 q11.2 113653 ChimerSeq ChiTaRs ChiTaRs APC-APC APC chr5 112068151 APC chr5 112067580 Exonic hg19 NA BF903928 Out-of-frame Intra-chr q22.2 Oncogene Tumor suppressor gene q22.2 Oncogene Tumor suppressor gene 113654 ChimerSeq ChiTaRs ChiTaRs TSPAN6-SOX5 TSPAN6 chrX 99884162 SOX5 chr12 23881675 Exonic hg19 NA H10368 Out-of-frame Inter-chr q22.1 p12.1 Transcription factor 113655 ChimerSeq ChiTaRs ChiTaRs OPTN-OPTN OPTN chr10 13180308 OPTN chr10 13179766 Exonic hg19 NA CB242718 Out-of-frame Intra-chr p13 p13 113656 ChimerSeq ChiTaRs ChiTaRs ALAD-ESRP2 ALAD chr9 116163533 ESRP2 chr16 68265707 Exonic hg19 NA BE563268 Out-of-frame Inter-chr q32 q22.1 113657 ChimerSeq ChiTaRs ChiTaRs CLASP1-ST8SIA4 CLASP1 chr2 122229057 ST8SIA4 chr5 100206971 Exonic hg19 NA DA572448 Out-of-frame Inter-chr q14.3 q21.1 113658 ChimerSeq ChiTaRs ChiTaRs LOC100288428-LOC100288428 LOC100288428 chr3 8326248 LOC100288428 chr3 8316923 Exonic hg19 NA AV732748 Out-of-frame Intra-chr 113659 ChimerSeq ChiTaRs ChiTaRs SEMA4A-RPL7L1 SEMA4A chr1 156147533 RPL7L1 chr6 42853714 Exonic hg19 NA AI350408 Out-of-frame Inter-chr q22 p21.1 113660 ChimerSeq ChiTaRs ChiTaRs DDIT4-DDIT4 DDIT4 chr10 74034737 DDIT4 chr10 74034744 Exonic hg19 NA CB162888 Out-of-frame Intra-chr q22.1 q22.1 113661 ChimerSeq ChiTaRs ChiTaRs CACNA1B-CALM1 CACNA1B chr9 140952317 CALM1 chr14 90866408 Exonic hg19 NA AA319858 Out-of-frame Inter-chr q34.3 q32.11 113662 ChimerSeq ChiTaRs ChiTaRs NKTR-RBFOX2 NKTR chr3 42678465 RBFOX2 chr22 36392705 Exonic hg19 NA BG986278 Out-of-frame Inter-chr p22.1 113663 ChimerSeq ChiTaRs ChiTaRs ZYX-NUDCD3 ZYX chr7 143088204 NUDCD3 chr7 44473732 Exonic hg19 NA CA427508 Out-of-frame Intra-chr q34 Tumor suppressor gene p13 113664 ChimerSeq ChiTaRs ChiTaRs GNG4-PSMD10 GNG4 chr1 235801806 PSMD10 chrX 107327444 Exonic hg19 NA AA743558 Out-of-frame Inter-chr q22.3 113665 ChimerSeq ChiTaRs ChiTaRs DYSF-PRKCSH DYSF chr2 71913893 PRKCSH chr19 11556212 Exonic hg19 NA AA968638 3'UTR-CDS Inter-chr p13.2 p13.2 113666 ChimerSeq ChiTaRs ChiTaRs CHN1-CHN1 CHN1 chr2 175712348 CHN1 chr2 175664129 Exonic hg19 NA X51408 Out-of-frame Intra-chr q31.1 q31.1 113667 ChimerSeq ChiTaRs ChiTaRs HADH-HADH HADH chr4 108911085 HADH chr4 108935650 Exonic hg19 NA CB164018 Out-of-frame Intra-chr q25 q25 113668 ChimerSeq ChiTaRs ChiTaRs BOD1-BOD1 BOD1 chr5 173034590 BOD1 chr5 173034583 Exonic hg19 NA AI887548 Out-of-frame Intra-chr q35.2 q35.2 113669 ChimerSeq ChiTaRs ChiTaRs NAT1-NAT1 NAT1 chr8 18080499 NAT1 chr8 18080286 Exonic hg19 NA BE775188 Out-of-frame Intra-chr p22 p22 113670 ChimerSeq ChiTaRs ChiTaRs SCD-SCD SCD chr10 102117281 SCD chr10 102115942 Exonic hg19 NA CB267198 Out-of-frame Intra-chr q24.31 q24.31 113671 ChimerSeq ChiTaRs ChiTaRs LST1-KIAA0247 LST1 chr6 2886284 KIAA0247 chr14 70100051 Exonic hg19 NA BF897098 Out-of-frame Inter-chr 113672 ChimerSeq ChiTaRs ChiTaRs FAM134B-FAM134B FAM134B chr5 16474657 FAM134B chr5 16508868 Exonic hg19 NA BP258358 Out-of-frame Intra-chr 113673 ChimerSeq ChiTaRs ChiTaRs PFKP-PABPC4 PFKP chr10 3170322 PABPC4 chr1 40026502 Exonic hg19 NA U33818 Out-of-frame Inter-chr p15.2 p34.3 113674 ChimerSeq ChiTaRs ChiTaRs PLEKHM3-RNF24 PLEKHM3 chr2 208738214 RNF24 chr20 3941475 Exonic hg19 NA AK130218 Out-of-frame Inter-chr q33.3 p13 113675 ChimerSeq ChiTaRs ChiTaRs NRBP1-NRBP1 NRBP1 chr2 27664650 NRBP1 chr2 27656162 Exonic hg19 NA BU155778 Out-of-frame Intra-chr p23.3 Other:NRBP Tumor suppressor gene p23.3 Other:NRBP Tumor suppressor gene 113676 ChimerSeq ChiTaRs ChiTaRs AHCYL1-AHCYL1 AHCYL1 chr1 110565005 AHCYL1 chr1 110565532 Exonic hg19 NA AI800578 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p13.3 Tumor suppressor gene 113677 ChimerSeq ChiTaRs ChiTaRs RPL36A-HNRNPH2-EPHA6 RPL36A-HNRNPH2 chrX 100662829 EPHA6 chr3 96639308 Exonic hg19 NA BF036178 Out-of-frame Inter-chr q22.1 q11.2 113678 ChimerSeq ChiTaRs ChiTaRs LUZP1-CDYL LUZP1 chr1 23418926 CDYL chr6 4793582 Exonic hg19 NA BG005238 Out-of-frame Inter-chr p36.12 p25.1 113679 ChimerSeq ChiTaRs ChiTaRs CACNB2-NUP98 CACNB2 chr10 18828413 NUP98 chr11 3793058 Exonic hg19 NA BF921318 Out-of-frame Inter-chr p12.33 p15.4 Oncogene Tumor suppressor gene 113680 ChimerSeq ChiTaRs ChiTaRs CNNM3-KIAA1244 CNNM3 chr2 97490906 KIAA1244 chr6 138529555 Exonic hg19 NA AW579778 Out-of-frame Inter-chr q11.2 113681 ChimerSeq ChiTaRs ChiTaRs LAMB2-LAMB2 LAMB2 chr3 49158717 LAMB2 chr3 49158718 Exonic hg19 NA AW996518 Out-of-frame Intra-chr p21.31 p21.31 113682 ChimerSeq ChiTaRs ChiTaRs CACNA2D2-SLCO4A1 CACNA2D2 chr3 50404910 SLCO4A1 chr20 61282331 Exonic hg19 NA BF085098 Out-of-frame Inter-chr p21.31 q13.33 113683 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-RPL34 INS-IGF2 chr11 2153766 RPL34 chr4 109546339 Exonic hg19 NA BF697308 Out-of-frame Inter-chr p15.5 q25 Oncogene 113684 ChimerSeq ChiTaRs ChiTaRs CSF1R-GDPD5 CSF1R chr5 149449513 GDPD5 chr11 75146622 Exonic hg19 NA BQ368248 Out-of-frame Inter-chr q32 Oncogene q13.5 113685 ChimerSeq ChiTaRs ChiTaRs AKR1C3-CLSTN1 AKR1C3 chr10 5034107 CLSTN1 chr1 9811552 Exonic hg19 NA BE720028 Out-of-frame Inter-chr p15.1 p36.22 113686 ChimerSeq ChiTaRs ChiTaRs BCOR-POM121L12 BCOR chrX 39922198 POM121L12 chr7 53103335 Exonic hg19 NA AK097768 Out-of-frame Inter-chr p11.4 Oncogene p12.1 113687 ChimerSeq ChiTaRs ChiTaRs S100A8-S100A8 S100A8 chr1 153362682 S100A8 chr1 153362699 Exonic hg19 NA CA944868 Out-of-frame Intra-chr q21.3 q21.3 113688 ChimerSeq ChiTaRs ChiTaRs CSPG5-MAG CSPG5 chr3 47614359 MAG chr19 35800990 Exonic hg19 NA BF364648 Out-of-frame Inter-chr p21.31 q13.12 113689 ChimerSeq ChiTaRs ChiTaRs MACF1-CLASP1 MACF1 chr1 39874969 CLASP1 chr2 122095629 Exonic hg19 NA AJ708378 Out-of-frame Inter-chr p34.3 q14.3 113690 ChimerSeq ChiTaRs ChiTaRs RBBP4-RBBP4 RBBP4 chr1 33151812 RBBP4 chr1 33151422 Exonic hg19 NA CB242058 3'UTR-3'UTR Intra-chr p35.1 p35.1 113691 ChimerSeq ChiTaRs ChiTaRs DIAPH2-HNRNPC DIAPH2 chrX 96063825 HNRNPC chr14 21731487 Exonic hg19 NA AW379408 Out-of-frame Inter-chr q21.33 q11.2 113692 ChimerSeq ChiTaRs ChiTaRs FLNA-FLNA FLNA chrX 153594758 FLNA chrX 153576899 Exonic hg19 NA BF844478 CDS-3'UTR Intra-chr q28 Tumor suppressor gene q28 Tumor suppressor gene 113693 ChimerSeq ChiTaRs ChiTaRs SOS1-SOS1 SOS1 chr2 39212767 SOS1 chr2 39212762 Exonic hg19 NA AA557998 Out-of-frame Intra-chr p22.1 p22.1 113694 ChimerSeq ChiTaRs ChiTaRs FUBP3-HERPUD1 FUBP3 chr9 133455028 HERPUD1 chr16 56966147 Exonic hg19 NA DA920088 Out-of-frame Inter-chr q34.11 q13 113695 ChimerSeq ChiTaRs ChiTaRs NUCKS1-NUCKS1 NUCKS1 chr1 205698716 NUCKS1 chr1 205688744 Exonic hg19 NA BG115778 Out-of-frame Intra-chr q32.1 q32.1 113696 ChimerSeq ChiTaRs ChiTaRs PLEKHA6-DDX23 PLEKHA6 chr1 204264160 DDX23 chr12 49244248 Exonic hg19 NA BF989648 Out-of-frame Inter-chr q32.1 q13.12 113697 ChimerSeq ChiTaRs ChiTaRs BBX-BBX BBX chr3 107511029 BBX chr3 107486149 Exonic hg19 NA AV706718 Out-of-frame Intra-chr q13.12 Transcription factor q13.12 Transcription factor 113698 ChimerSeq ChiTaRs ChiTaRs SMC1A-SEC31A SMC1A chrX 53449656 SEC31A chr4 83745708 Exonic hg19 NA DT219678 Out-of-frame Inter-chr p11.22 q21.22 113699 ChimerSeq ChiTaRs ChiTaRs IBA57-IBA57 IBA57 chr1 228353741 IBA57 chr1 228353766 Exonic hg19 NA AW204168 Out-of-frame Intra-chr q42.13 q42.13 113700 ChimerSeq ChiTaRs ChiTaRs ZRANB1-ZRANB1 ZRANB1 chr10 126673769 ZRANB1 chr10 126673738 Exonic hg19 NA AL135088 Out-of-frame Intra-chr q26.13 q26.13 113701 ChimerSeq ChiTaRs ChiTaRs MLL3-CST4 MLL3 chr7 151974416 CST4 chr20 23666277 Exonic hg19 NA AK130538 Out-of-frame Inter-chr Tumor suppressor gene p11.21 113702 ChimerSeq ChiTaRs ChiTaRs UGP2-CECR2 UGP2 chr2 64087013 CECR2 chr22 17896160 Exonic hg19 NA BI026848 Out-of-frame Inter-chr p15 q11.1 113703 ChimerSeq ChiTaRs ChiTaRs CD34-DEPDC1B CD34 chr1 208060067 DEPDC1B chr5 59895934 Exonic hg19 NA AI394178 Out-of-frame Inter-chr q32.2 q12.1 113704 ChimerSeq ChiTaRs ChiTaRs PBX2-DERA PBX2 chr6 3500329 DERA chr12 16135301 Exonic hg19 NA BF589398 Out-of-frame Inter-chr p21.32 Transcription factor p12.3 113705 ChimerSeq ChiTaRs ChiTaRs HMGCLL1-GTPBP1 HMGCLL1 chr6 55359019 GTPBP1 chr22 39128959 Exonic hg19 NA T70878 Out-of-frame Inter-chr p12.1 q13.1 113706 ChimerSeq ChiTaRs ChiTaRs ZEB2-IGJ ZEB2 chr2 145254445 IGJ chr4 71521260 Exonic hg19 NA AK026778 Out-of-frame Inter-chr q22.3 Transcription factor 113707 ChimerSeq ChiTaRs ChiTaRs PWWP2B-LBH PWWP2B chr10 134230725 LBH chr2 30478289 Exonic hg19 NA N75418 Out-of-frame Inter-chr q26.3 p23.1 113708 ChimerSeq ChiTaRs ChiTaRs GALM-ALK GALM chr2 39308967 ALK chr2 30081615 Exonic hg19 NA CR997728 Out-of-frame Intra-chr p22.1 p23.1 TK:ALK Oncogene 113709 ChimerSeq ChiTaRs ChiTaRs EDEM3-GBAP1 EDEM3 chr1 184664531 GBAP1 chr1 155204244 Exonic hg19 NA M16328 Out-of-frame Intra-chr q25.3 q22 113710 ChimerSeq ChiTaRs ChiTaRs BTF3-STAU1 BTF3 chr5 72801319 STAU1 chr20 47739698 Exonic hg19 NA AA025528 Out-of-frame Inter-chr q13.2 q13.13 113711 ChimerSeq ChiTaRs ChiTaRs TOPBP1-CEP135 TOPBP1 chr3 133364745 CEP135 chr4 56898258 Exonic hg19 NA AA704218 Out-of-frame Inter-chr q22.1 q12 113712 ChimerSeq ChiTaRs ChiTaRs FAM172A-MME FAM172A chr5 93018301 MME chr3 154866337 Exonic hg19 NA BU631638 Out-of-frame Inter-chr q15 Tumor suppressor gene q25.2 Tumor suppressor gene 113713 ChimerSeq ChiTaRs ChiTaRs LARP4B-STAM2 LARP4B chr10 876457 STAM2 chr2 152986620 Exonic hg19 NA T05378 Out-of-frame Inter-chr p15.3 q23.3 113714 ChimerSeq ChiTaRs ChiTaRs FYN-FYN FYN chr6 111984539 FYN chr6 111983799 Exonic hg19 NA BQ924758 Out-of-frame Intra-chr q21 TK:Src q21 TK:Src 113715 ChimerSeq ChiTaRs ChiTaRs USF1-SUPT7L USF1 chr1 161015757 SUPT7L chr2 27884046 Exonic hg19 NA BP257468 5'UTR-CDS Inter-chr q23.3 Transcription factor p23.3 113716 ChimerSeq ChiTaRs ChiTaRs PHYHIPL-PHYHIPL PHYHIPL chr10 61006090 PHYHIPL chr10 61006050 Exonic hg19 NA N64328 Out-of-frame Intra-chr q21.1 q21.1 113717 ChimerSeq ChiTaRs ChiTaRs PIGR-NPIPB7 PIGR chr1 207103650 NPIPB7 chr16 28997993 Exonic hg19 NA BE083578 Out-of-frame Inter-chr q32.1 p12.1 113718 ChimerSeq ChiTaRs ChiTaRs RABGAP1-RABGAP1 RABGAP1 chr9 125866851 RABGAP1 chr9 125866865 Exonic hg19 NA AW801218 Out-of-frame Intra-chr q33.2 q33.2 113719 ChimerSeq ChiTaRs ChiTaRs TNKS2-BTBD2 TNKS2 chr10 93608181 BTBD2 chr19 1985447 Exonic hg19 NA BC023218 Out-of-frame Inter-chr q23.32 p13.3 113720 ChimerSeq ChiTaRs ChiTaRs TGFBI-CNPY3 TGFBI chr5 135390878 CNPY3 chr6 42906903 Exonic hg19 NA AB209598 Out-of-frame Inter-chr q31.1 Tumor suppressor gene p21.1 113721 ChimerSeq ChiTaRs ChiTaRs ADAR-ADAR ADAR chr1 154555061 ADAR chr1 154555123 Exonic hg19 NA BU676948 Out-of-frame Intra-chr q21.3 q21.3 113722 ChimerSeq ChiTaRs ChiTaRs ERGIC1-ERGIC1 ERGIC1 chr5 172379103 ERGIC1 chr5 172379088 Exonic hg19 NA CN411868 Out-of-frame Intra-chr q35.1 q35.1 113723 ChimerSeq ChiTaRs ChiTaRs CSRP1-CD9 CSRP1 chr1 201453553 CD9 chr12 6347041 Exonic hg19 NA BF767858 Out-of-frame Inter-chr q32.1 p13.31 113724 ChimerSeq ChiTaRs ChiTaRs MOG-FBXO7 MOG chr6 976307 FBXO7 chr22 32880917 Exonic hg19 NA BG217428 Out-of-frame Inter-chr q12.3 113725 ChimerSeq ChiTaRs ChiTaRs LEMD2-LEMD2 LEMD2 chr6 33739126 LEMD2 chr6 33739103 Exonic hg19 NA BM986968 Out-of-frame Intra-chr p21.31 p21.31 113726 ChimerSeq ChiTaRs ChiTaRs CAPN13-CAPN13 CAPN13 chr2 30961154 CAPN13 chr2 30945637 Exonic hg19 NA BX647678 Out-of-frame Intra-chr p23.1 p23.1 113727 ChimerSeq ChiTaRs ChiTaRs ZMIZ2-FAM3C ZMIZ2 chr7 44805086 FAM3C chr7 120988905 Exonic hg19 NA BC016968 Out-of-frame Intra-chr p13 q31.31 113728 ChimerSeq ChiTaRs ChiTaRs CCDC88A-CCDC88A CCDC88A chr2 55562085 CCDC88A chr2 55566698 Exonic hg19 NA AA749038 Out-of-frame Intra-chr p16.1 p16.1 113729 ChimerSeq ChiTaRs ChiTaRs MAN1A2-LONP1 MAN1A2 chr1 117953492 LONP1 chr19 5691845 Exonic hg19 NA BU859918 Out-of-frame Inter-chr p12 p13.3 113730 ChimerSeq ChiTaRs ChiTaRs SORT1-KLHDC3 SORT1 chr1 109940573 KLHDC3 chr6 42982018 Exonic hg19 NA X98248 Out-of-frame Inter-chr p13.3 p21.1 113731 ChimerSeq ChiTaRs ChiTaRs IBTK-IBTK IBTK chr6 82880616 IBTK chr6 82880030 Exonic hg19 NA BE617418 Out-of-frame Intra-chr 113732 ChimerSeq ChiTaRs ChiTaRs NRBP1-NRBP1 NRBP1 chr2 27665121 NRBP1 chr2 27663704 Exonic hg19 NA AA639598 Out-of-frame Intra-chr p23.3 Other:NRBP Tumor suppressor gene p23.3 Other:NRBP Tumor suppressor gene 113733 ChimerSeq ChiTaRs ChiTaRs SVIL-SVIL SVIL chr10 29980749 SVIL chr10 29990669 Exonic hg19 NA BG993488 Out-of-frame Intra-chr p11.23 p11.23 113734 ChimerSeq ChiTaRs ChiTaRs ANTXR1-NCOA3 ANTXR1 chr2 69397409 NCOA3 chr20 46219171 Exonic hg19 NA BF839348 Out-of-frame Inter-chr p13.3 q13.12 Transcription factor 113735 ChimerSeq ChiTaRs ChiTaRs PTPN3-SHOC2 PTPN3 chr9 112166890 SHOC2 chr10 112705534 Exonic hg19 NA BF765408 Out-of-frame Inter-chr q31.3 q25.2 113736 ChimerSeq ChiTaRs ChiTaRs KCNIP1-KCNIP1 KCNIP1 chr5 170033733 KCNIP1 chr5 170033354 Exonic hg19 NA CV314228 Out-of-frame Intra-chr q35.1 q35.1 113737 ChimerSeq ChiTaRs ChiTaRs SSR1-SRPK2 SSR1 chr6 7288657 SRPK2 chr7 104783707 Exonic hg19 NA AW392218 Out-of-frame Inter-chr p24.3 q22.3 CMGC:SRPK 113738 ChimerSeq ChiTaRs ChiTaRs INADL-HSP90B1 INADL chr1 62321825 HSP90B1 chr12 104336370 Exonic hg19 NA BQ291998 Out-of-frame Inter-chr q23.3 Tumor suppressor gene 113739 ChimerSeq ChiTaRs ChiTaRs PDE7A-PDE7A PDE7A chr8 66681075 PDE7A chr8 66682357 Exonic hg19 NA BM722198 Out-of-frame Intra-chr q13.1 q13.1 113740 ChimerSeq ChiTaRs ChiTaRs STK17A-STK17A STK17A chr7 43661685 STK17A chr7 43661328 Exonic hg19 NA BE151748 Out-of-frame Intra-chr p13 p13 113741 ChimerSeq ChiTaRs ChiTaRs NUDT5-WDR90 NUDT5 chr10 12214221 WDR90 chr16 714964 Exonic hg19 NA DA370758 Out-of-frame Inter-chr p14 p13.3 113742 ChimerSeq ChiTaRs ChiTaRs CAMK1D-CAMK1D CAMK1D chr10 12870942 CAMK1D chr10 12391809 Exonic hg19 NA AW182758 Out-of-frame Intra-chr p13 p13 113743 ChimerSeq ChiTaRs ChiTaRs MLL3-MLL3 MLL3 chr7 151832478 MLL3 chr7 151832496 Exonic hg19 NA BU678748 Out-of-frame Intra-chr Tumor suppressor gene Tumor suppressor gene 113744 ChimerSeq ChiTaRs ChiTaRs CTNNB1-OLFML2B CTNNB1 chr3 41266194 OLFML2B chr1 161993499 Exonic hg19 NA BP232398 Out-of-frame Inter-chr p22.1 Oncogene q23.3 113745 ChimerSeq ChiTaRs ChiTaRs SDHB-SDHB SDHB chr1 17345412 SDHB chr1 17355181 Exonic hg19 NA N70468 Out-of-frame Intra-chr p36.13 Oncogene Tumor suppressor gene p36.13 Oncogene Tumor suppressor gene 113746 ChimerSeq ChiTaRs ChiTaRs UBLCP1-INS-IGF2 UBLCP1 chr5 158712403 INS-IGF2 chr11 2153350 Exonic hg19 NA N58118 Out-of-frame Inter-chr q33.3 p15.5 113747 ChimerSeq ChiTaRs ChiTaRs ARSD-ARSD ARSD chrX 2823042 ARSD chrX 2822301 Exonic hg19 NA BF437218 Out-of-frame Intra-chr p22.33 p22.33 113748 ChimerSeq ChiTaRs ChiTaRs CREB5-NUDCD2 CREB5 chr7 28585266 NUDCD2 chr5 162880624 Exonic hg19 NA AA737108 Out-of-frame Inter-chr p15.1 Transcription factor q34 113749 ChimerSeq ChiTaRs ChiTaRs PIGC-MTHFD1 PIGC chr1 172411063 MTHFD1 chr14 64924985 Exonic hg19 NA AW581578 Out-of-frame Inter-chr q24.3 q23.3 113750 ChimerSeq ChiTaRs ChiTaRs RGS7-DNAAF1 RGS7 chr1 241026273 DNAAF1 chr16 84203980 Exonic hg19 NA BG997808 Out-of-frame Inter-chr q43 q24.1 113751 ChimerSeq ChiTaRs ChiTaRs ATP1B1-ATP1B1 ATP1B1 chr1 169101892 ATP1B1 chr1 169101904 Exonic hg19 NA BM968498 Out-of-frame Intra-chr q24.2 q24.2 113752 ChimerSeq ChiTaRs ChiTaRs SERPING1-CPNE1 SERPING1 chr11 57382320 CPNE1 chr20 34246868 Exonic hg19 NA AA738028 Out-of-frame Inter-chr q12.1 q11.22 113753 ChimerSeq ChiTaRs ChiTaRs TCF7L2-PTPRC TCF7L2 chr10 114823820 PTPRC chr1 198665701 Exonic hg19 NA BF910208 Out-of-frame Inter-chr q25.2 Oncogene Tumor suppressor gene Transcription factor Tumor suppressor gene 113754 ChimerSeq ChiTaRs ChiTaRs EEF1B2-CDR1 EEF1B2 chr2 207027239 CDR1 chrX 139866568 Exonic hg19 NA DA486448 Out-of-frame Inter-chr q27.1 113755 ChimerSeq ChiTaRs ChiTaRs CD82-POLR2E CD82 chr11 44628366 POLR2E chr19 1094579 Exonic hg19 NA BF898728 Out-of-frame Inter-chr p11.2 Tumor suppressor gene p13.3 113756 ChimerSeq ChiTaRs ChiTaRs RUFY1-GLUL RUFY1 chr5 178993345 GLUL chr1 182358989 Exonic hg19 NA BF932728 Out-of-frame Inter-chr q25.3 113757 ChimerSeq ChiTaRs ChiTaRs KIAA1147-KIAA1147 KIAA1147 chr7 141361508 KIAA1147 chr7 141361501 Exonic hg19 NA AA225538 Out-of-frame Intra-chr 113758 ChimerSeq ChiTaRs ChiTaRs EZR-PPP2R5C EZR chr6 159215374 PPP2R5C chr14 102360043 Exonic hg19 NA CR747188 Out-of-frame Inter-chr q25.3 q32.31 Tumor suppressor gene 113759 ChimerSeq ChiTaRs ChiTaRs APBB2-CCNB1 APBB2 chr4 40816464 CCNB1 chr5 68462964 Exonic hg19 NA BC018868 Out-of-frame Inter-chr p13 q13.2 113760 ChimerSeq ChiTaRs ChiTaRs CUL7-CUL7 CUL7 chr6 43018139 CUL7 chr6 43020054 Exonic hg19 NA BI053718 Out-of-frame Intra-chr p21.1 p21.1 113761 ChimerSeq ChiTaRs ChiTaRs PCM1-FGL1 PCM1 chr8 17780697 FGL1 chr8 17739588 Exonic hg19 NA BM914108 5'UTR-CDS Intra-chr p22 p22 113762 ChimerSeq ChiTaRs ChiTaRs IL6ST-IL6ST IL6ST chr5 55259997 IL6ST chr5 55259267 Exonic hg19 NA W74058 Out-of-frame Intra-chr q11.2 Oncogene q11.2 Oncogene 113763 ChimerSeq ChiTaRs ChiTaRs RETSAT-HLA-DRB5 RETSAT chr2 85569333 HLA-DRB5 chr6 32485146 Exonic hg19 NA CA312858 Out-of-frame Inter-chr p11.2 p21.32 113764 ChimerSeq ChiTaRs ChiTaRs ROBO2-PAFAH2 ROBO2 chr3 76950589 PAFAH2 chr1 26287619 Exonic hg19 NA AW449898 Out-of-frame Inter-chr p12.3 p36.11 113765 ChimerSeq ChiTaRs ChiTaRs SKINTL-DYNLRB1 SKINTL chr1 48570379 DYNLRB1 chr20 33122444 Exonic hg19 NA AF111848 Out-of-frame Inter-chr q11.22 113766 ChimerSeq ChiTaRs ChiTaRs CYP1B1-CYP1B1 CYP1B1 chr2 38295516 CYP1B1 chr2 38295430 Exonic hg19 NA CB243208 Out-of-frame Intra-chr p22.2 p22.2 113767 ChimerSeq ChiTaRs ChiTaRs CLDN11-AASDHPPT CLDN11 chr3 170232821 AASDHPPT chr11 105955609 Exonic hg19 NA DA211258 Out-of-frame Inter-chr q26.2 q22.3 113768 ChimerSeq ChiTaRs ChiTaRs NUP133-FAF1 NUP133 chr1 229593017 FAF1 chr1 51407501 Exonic hg19 NA AW895718 Out-of-frame Intra-chr q42.13 p32.3 113769 ChimerSeq ChiTaRs ChiTaRs ZC3H11A-SEC61A1 ZC3H11A chr1 203764930 SEC61A1 chr3 127775637 Exonic hg19 NA DA580258 Out-of-frame Inter-chr q32.1 q21.3 113770 ChimerSeq ChiTaRs ChiTaRs FRK-ABLIM1 FRK chr6 116279537 ABLIM1 chr10 116380420 Exonic hg19 NA AI909678 Out-of-frame Inter-chr q22.1 TK:Src Tumor suppressor gene q25.3 113771 ChimerSeq ChiTaRs ChiTaRs TSEN2-TSEN2 TSEN2 chr3 12551629 TSEN2 chr3 12565281 Exonic hg19 NA CV398848 Out-of-frame Intra-chr p25.2 p25.2 113772 ChimerSeq ChiTaRs ChiTaRs UBE2R2-UBE2R2 UBE2R2 chr9 33920301 UBE2R2 chr9 33920294 Exonic hg19 NA AA639068 Out-of-frame Intra-chr p13.3 p13.3 113773 ChimerSeq ChiTaRs ChiTaRs C9orf69-C9orf69 C9orf69 chr9 139010670 C9orf69 chr9 139008360 Exonic hg19 NA AW008528 Out-of-frame Intra-chr 113774 ChimerSeq ChiTaRs ChiTaRs NT5C2-NT5C2 NT5C2 chr10 104879765 NT5C2 chr10 104878246 Exonic hg19 NA BE178418 Out-of-frame Intra-chr q24.33 q24.33 113775 ChimerSeq ChiTaRs ChiTaRs MELK-STARD7 MELK chr9 36637874 STARD7 chr2 96857787 Exonic hg19 NA AW850188 Out-of-frame Inter-chr p13.2 CAMK:CAMKL q11.2 113776 ChimerSeq ChiTaRs ChiTaRs PLEKHA6-PLEKHA6 PLEKHA6 chr1 204231229 PLEKHA6 chr1 204228454 Exonic hg19 NA BG007438 Out-of-frame Intra-chr q32.1 q32.1 113777 ChimerSeq ChiTaRs ChiTaRs KCNMA1-SMARCA2 KCNMA1 chr10 78646615 SMARCA2 chr9 2051132 Exonic hg19 NA BE772448 Out-of-frame Inter-chr q22.3 p24.3 Tumor suppressor gene 113778 ChimerSeq ChiTaRs ChiTaRs PPM1G-FOXO3 PPM1G chr2 27604640 FOXO3 chr6 108915984 Exonic hg19 NA BE149668 Out-of-frame Inter-chr p23.3 q21 Oncogene Tumor suppressor gene Transcription factor 113779 ChimerSeq ChiTaRs ChiTaRs GMPPB-GMPPB GMPPB chr3 49759922 GMPPB chr3 49759441 Exonic hg19 NA BE838598 Out-of-frame Intra-chr p21.31 p21.31 113780 ChimerSeq ChiTaRs ChiTaRs STEAP3-MT1X STEAP3 chr2 119994370 MT1X chr16 56717848 Exonic hg19 NA AV649288 Out-of-frame Inter-chr q14.2 q13 113781 ChimerSeq ChiTaRs ChiTaRs TRA2A-TRA2A TRA2A chr7 23554621 TRA2A chr7 23567118 Exonic hg19 NA AW936418 Out-of-frame Intra-chr p15.3 p15.3 113782 ChimerSeq ChiTaRs ChiTaRs SPOCK1-TCTN3 SPOCK1 chr5 136452649 TCTN3 chr10 97423697 Exonic hg19 NA BF088878 Out-of-frame Inter-chr q31.2 q24.1 113783 ChimerSeq ChiTaRs ChiTaRs SCN2A-NIT1 SCN2A chr2 166237379 NIT1 chr1 161091736 Exonic hg19 NA CB110238 Out-of-frame Inter-chr q24.3 q23.3 113784 ChimerSeq ChiTaRs ChiTaRs EIF4G2-EIF4G2 EIF4G2 chr11 10820972 EIF4G2 chr11 10818913 Exonic hg19 NA BU187908 Out-of-frame Intra-chr p15.4 p15.4 113785 ChimerSeq ChiTaRs ChiTaRs TMEM232-FAHD1 TMEM232 chr5 110036336 FAHD1 chr16 1878381 Exonic hg19 NA BF750058 Out-of-frame Inter-chr q22.1 p13.3 113786 ChimerSeq ChiTaRs ChiTaRs PTPRN2-PTPRN2 PTPRN2 chr7 157360414 PTPRN2 chr7 157360043 Exonic hg19 NA AW813528 Out-of-frame Intra-chr q36.3 q36.3 113787 ChimerSeq ChiTaRs ChiTaRs ZNF644-ZNF644 ZNF644 chr1 91405481 ZNF644 chr1 91405453 Exonic hg19 NA BX955248 Out-of-frame Intra-chr p22.2 Transcription factor p22.2 Transcription factor 113788 ChimerSeq ChiTaRs ChiTaRs CTSS-CTSS CTSS chr1 150705612 CTSS chr1 150704879 Exonic hg19 NA BF891448 Out-of-frame Intra-chr q21.3 q21.3 113789 ChimerSeq ChiTaRs ChiTaRs VPS13B-GDPD1 VPS13B chr8 100889808 GDPD1 chr17 57352608 Exonic hg19 NA BU608568 Out-of-frame Inter-chr q22.2 q22 113790 ChimerSeq ChiTaRs ChiTaRs PCNP-CKB PCNP chr3 101295384 CKB chr14 103987665 Exonic hg19 NA AI184838 Out-of-frame Inter-chr q12.3 q32.33 113791 ChimerSeq ChiTaRs ChiTaRs C7orf73-C7orf73 C7orf73 chr7 135359628 C7orf73 chr7 135359354 Exonic hg19 NA BE075528 Out-of-frame Intra-chr q33 q33 113792 ChimerSeq ChiTaRs ChiTaRs IL1R1-IL1R1 IL1R1 chr2 102795025 IL1R1 chr2 102795017 Exonic hg19 NA BE842588 Out-of-frame Intra-chr q11.2 q11.2 113793 ChimerSeq ChiTaRs ChiTaRs IGF2BP3-POLR2B IGF2BP3 chr7 23419383 POLR2B chr4 57897001 Exonic hg19 NA W81438 Out-of-frame Inter-chr p15.3 q12 113794 ChimerSeq ChiTaRs ChiTaRs TCF7L2-PTPRC TCF7L2 chr10 114823823 PTPRC chr1 198665701 Exonic hg19 NA BF910138 Out-of-frame Inter-chr q25.2 Oncogene Tumor suppressor gene Transcription factor Tumor suppressor gene 113795 ChimerSeq ChiTaRs ChiTaRs RNF220-PTMS RNF220 chr1 45113129 PTMS chr12 6879843 Exonic hg19 NA BF953818 Out-of-frame Inter-chr p34.1 p13.31 113796 ChimerSeq ChiTaRs ChiTaRs TNKS2-CLCNKB TNKS2 chr10 93609803 CLCNKB chr1 16372781 Exonic hg19 NA DA377618 Out-of-frame Inter-chr q23.32 p36.13 113797 ChimerSeq ChiTaRs ChiTaRs JAZF1-AS1-ABLIM1 JAZF1-AS1 chr7 28269081 ABLIM1 chr10 116273385 Exonic hg19 NA BI037108 Out-of-frame Inter-chr p15.1 Transcription factor q25.3 Tumor suppressor gene 113798 ChimerSeq ChiTaRs ChiTaRs C2orf61-CABIN1 C2orf61 chr2 47403650 CABIN1 chr22 24491284 Exonic hg19 NA BP219658 Out-of-frame Inter-chr 113799 ChimerSeq ChiTaRs ChiTaRs CCDC120-CCDC120 CCDC120 chrX 48921960 CCDC120 chrX 48926016 Exonic hg19 NA AA639618 Out-of-frame Intra-chr p11.23 p11.23 113800 ChimerSeq ChiTaRs ChiTaRs MXI1-MXI1 MXI1 chr10 112046264 MXI1 chr10 111985928 Exonic hg19 NA L07648 Out-of-frame Intra-chr q25.2 Tumor suppressor gene Transcription factor q25.2 Tumor suppressor gene Transcription factor 113801 ChimerSeq ChiTaRs ChiTaRs OGG1-CBX2 OGG1 chr3 9799121 CBX2 chr17 77758375 Exonic hg19 NA AI554178 Out-of-frame Inter-chr p25.3 q25.3 Transcription factor 113802 ChimerSeq ChiTaRs ChiTaRs ZFHX4-AMBRA1 ZFHX4 chr8 77699665 AMBRA1 chr11 46496512 Exonic hg19 NA AW389898 Out-of-frame Inter-chr q21.13 Transcription factor p11.2 113803 ChimerSeq ChiTaRs ChiTaRs TPM2-ECHDC2 TPM2 chr9 35683643 ECHDC2 chr1 53370428 Exonic hg19 NA DB248548 Out-of-frame Inter-chr p13.3 p32.3 113804 ChimerSeq ChiTaRs ChiTaRs TLK1-RABEP1 TLK1 chr2 171942648 RABEP1 chr17 5283170 Exonic hg19 NA DA277848 Out-of-frame Inter-chr q31.1 Other:TLK p13.2 113805 ChimerSeq ChiTaRs ChiTaRs PRELP-CCDC36 PRELP chr1 203452459 CCDC36 chr3 49282867 Exonic hg19 NA BM686368 Out-of-frame Inter-chr q32.1 p21.31 113806 ChimerSeq ChiTaRs ChiTaRs ATP13A3-ATP13A3 ATP13A3 chr3 194154962 ATP13A3 chr3 194154646 Exonic hg19 NA BE180488 Out-of-frame Intra-chr q29 q29 113807 ChimerSeq ChiTaRs ChiTaRs YTHDC1-EMG1 YTHDC1 chr4 9026 EMG1 chr12 7088639 Exonic hg19 NA AW467048 Out-of-frame Inter-chr p13.31 113808 ChimerSeq ChiTaRs ChiTaRs ATP6V1C2-EIF4A2 ATP6V1C2 chr2 10923658 EIF4A2 chr3 186506429 Exonic hg19 NA AI810008 Out-of-frame Inter-chr p25.1 q27.3 113809 ChimerSeq ChiTaRs ChiTaRs MCPH1-EPC2 MCPH1 chr8 6420264 EPC2 chr2 149543299 Exonic hg19 NA BE842988 Out-of-frame Inter-chr p23.1 Tumor suppressor gene q23.1 113810 ChimerSeq ChiTaRs ChiTaRs CAPG-WDTC1 CAPG chr2 85621981 WDTC1 chr1 27631574 Exonic hg19 NA AW276648 Out-of-frame Inter-chr p11.2 Tumor suppressor gene p36.11 113811 ChimerSeq ChiTaRs ChiTaRs CPLX2-CPLX2 CPLX2 chr5 175310613 CPLX2 chr5 175310595 Exonic hg19 NA T31038 Out-of-frame Intra-chr q35.2 q35.2 113812 ChimerSeq ChiTaRs ChiTaRs IRF4-PMF1 IRF4 chr6 395008 PMF1 chr1 156195468 Exonic hg19 NA BE830408 Out-of-frame Inter-chr p25.3 Oncogene Tumor suppressor gene Transcription factor q22 113813 ChimerSeq ChiTaRs ChiTaRs C6orf48-COMMD2 C6orf48 chr6 3096425 COMMD2 chr3 149456614 Exonic hg19 NA BG493098 Out-of-frame Inter-chr q25.1 113814 ChimerSeq ChiTaRs ChiTaRs RPN1-RPN1 RPN1 chr3 128339405 RPN1 chr3 128338867 Exonic hg19 NA AW067818 Out-of-frame Intra-chr q21.3 q21.3 113815 ChimerSeq ChiTaRs ChiTaRs ITGA1-PKIB ITGA1 chr5 52153546 PKIB chr6 123029346 Exonic hg19 NA CV416658 Out-of-frame Inter-chr q11.2 q22.31 113816 ChimerSeq ChiTaRs ChiTaRs FAM49A-ZC3H7B FAM49A chr2 16740961 ZC3H7B chr22 41721862 Exonic hg19 NA AI739458 Out-of-frame Inter-chr p24.2 q13.2 113817 ChimerSeq ChiTaRs ChiTaRs AGBL4-HNRNPC AGBL4 chr1 49610823 HNRNPC chr14 21703041 Exonic hg19 NA CV353238 Out-of-frame Inter-chr p33 q11.2 113818 ChimerSeq ChiTaRs ChiTaRs ZYX-ZYX ZYX chr7 143087071 ZYX chr7 143087690 Exonic hg19 NA CB159118 Out-of-frame Intra-chr q34 Tumor suppressor gene q34 Tumor suppressor gene 113819 ChimerSeq ChiTaRs ChiTaRs PDLIM3-PNOC PDLIM3 chr4 186453609 PNOC chr8 28196881 Exonic hg19 NA AW383368 Out-of-frame Inter-chr q35.1 p21.1 113820 ChimerSeq ChiTaRs ChiTaRs SPAG17-NDUFV2 SPAG17 chr1 118640816 NDUFV2 chr18 9126067 Exonic hg19 NA BQ429818 Out-of-frame Inter-chr p12 p11.22 113821 ChimerSeq ChiTaRs ChiTaRs CSF1R-RCOR1 CSF1R chr5 149449829 RCOR1 chr14 103084883 Exonic hg19 NA BI050908 Out-of-frame Inter-chr q32 Oncogene q32.31 113822 ChimerSeq ChiTaRs ChiTaRs PIP5K1B-ABHD15 PIP5K1B chr9 71582242 ABHD15 chr17 27889217 Exonic hg19 NA BF358668 Out-of-frame Inter-chr q21.11 q11.2 113823 ChimerSeq ChiTaRs ChiTaRs SFPQ-SFPQ SFPQ chr1 35656512 SFPQ chr1 35654608 Exonic hg19 NA BE385898 Out-of-frame Intra-chr p34.3 p34.3 113824 ChimerSeq ChiTaRs ChiTaRs FGFR2-GLB1L2 FGFR2 chr10 123238028 GLB1L2 chr11 134243632 Exonic hg19 NA AI379298 Out-of-frame Inter-chr q26.13 TK:FGFR Oncogene q25 113825 ChimerSeq ChiTaRs ChiTaRs TMEM55A-ADAM28 TMEM55A chr8 92006940 ADAM28 chr8 24208468 Exonic hg19 NA BG925828 Out-of-frame Intra-chr q21.3 p21.2 113826 ChimerSeq ChiTaRs ChiTaRs RPLP2-PEG10 RPLP2 chr11 812874 PEG10 chr7 94296237 Exonic hg19 NA AA733088 Out-of-frame Inter-chr p15.5 q21.3 113827 ChimerSeq ChiTaRs ChiTaRs NSMCE2-ACIN1 NSMCE2 chr8 126325820 ACIN1 chr14 23540209 Exonic hg19 NA CK327028 Out-of-frame Inter-chr q24.13 q11.2 113828 ChimerSeq ChiTaRs ChiTaRs AGPAT5-AGPAT5 AGPAT5 chr8 6614648 AGPAT5 chr8 6612699 Exonic hg19 NA DA830108 Out-of-frame Intra-chr p23.1 p23.1 113829 ChimerSeq ChiTaRs ChiTaRs OFCC1-OFCC1 OFCC1 chr6 9933180 OFCC1 chr6 9850631 Exonic hg19 NA AF548118 Out-of-frame Intra-chr p24.3 p24.3 113830 ChimerSeq ChiTaRs ChiTaRs UTS2-ZZEF1 UTS2 chr1 7957207 ZZEF1 chr17 3955297 Exonic hg19 NA BF895548 Out-of-frame Inter-chr p36.23 p13.2 113831 ChimerSeq ChiTaRs ChiTaRs EPT1-LARP1 EPT1 chr2 26611968 LARP1 chr5 154196053 Exonic hg19 NA AW602498 Out-of-frame Inter-chr q33.2 113832 ChimerSeq ChiTaRs ChiTaRs SURF4-CUX1 SURF4 chr9 136228512 CUX1 chr7 101587577 Exonic hg19 NA R26138 Out-of-frame Inter-chr q22.1 Tumor suppressor gene Transcription factor 113833 ChimerSeq ChiTaRs ChiTaRs HNRNPAB-AGPS HNRNPAB chr5 177638114 AGPS chr2 178328933 Exonic hg19 NA AW889598 Out-of-frame Inter-chr q35.3 q31.2 113834 ChimerSeq ChiTaRs ChiTaRs UNC13B-DDT UNC13B chr9 35306946 DDT chr22 24312856 Exonic hg19 NA BF879568 Out-of-frame Inter-chr p13.3 113835 ChimerSeq ChiTaRs ChiTaRs HLA-C-HLA-B HLA-C chr6 2570153 HLA-B chr6 2834481 Exonic hg19 NA AW405998 Out-of-frame Intra-chr 113836 ChimerSeq ChiTaRs ChiTaRs COLQ-NICN1 COLQ chr3 15555350 NICN1 chr3 49461723 Exonic hg19 NA BQ347018 Out-of-frame Intra-chr p25.1 p21.31 113837 ChimerSeq ChiTaRs ChiTaRs CASP2-CASP2 CASP2 chr7 143000229 CASP2 chr7 143000983 Exonic hg19 NA AI479768 Out-of-frame Intra-chr q34 Tumor suppressor gene q34 Tumor suppressor gene 113838 ChimerSeq ChiTaRs ChiTaRs HINT1-DYNC2H1 HINT1 chr5 130495306 DYNC2H1 chr11 102991684 Exonic hg19 NA BX490578 Out-of-frame Inter-chr q23.3 Tumor suppressor gene q22.3 113839 ChimerSeq ChiTaRs ChiTaRs STAU2-STAU2 STAU2 chr8 74391938 STAU2 chr8 74392667 Exonic hg19 NA BE143518 Out-of-frame Intra-chr q21.11 q21.11 113840 ChimerSeq ChiTaRs ChiTaRs CDC42SE2-CDC42SE2 CDC42SE2 chr5 130673959 CDC42SE2 chr5 130675586 Exonic hg19 NA CV416998 Out-of-frame Intra-chr q31.1 q31.1 113841 ChimerSeq ChiTaRs ChiTaRs MIR548G-TNS1 MIR548G chr3 99515160 TNS1 chr2 218664514 Exonic hg19 NA D79968 Out-of-frame Inter-chr q31.22 q35 113842 ChimerSeq ChiTaRs ChiTaRs SMAP1-POLR2G SMAP1 chr6 71428545 POLR2G chr11 62532833 Exonic hg19 NA CB048938 Out-of-frame Inter-chr q13 q12.3 113843 ChimerSeq ChiTaRs ChiTaRs NBPF11-ZNF407 NBPF11 chr1 147910578 ZNF407 chr18 72343715 Exonic hg19 NA BE838578 Out-of-frame Inter-chr q21.2 q22.3 Transcription factor 113844 ChimerSeq ChiTaRs ChiTaRs ZHX2-SMARCC1 ZHX2 chr8 123815478 SMARCC1 chr3 47661166 Exonic hg19 NA CD512498 Out-of-frame Inter-chr q24.13 Tumor suppressor gene Transcription factor p21.31 Tumor suppressor gene 113845 ChimerSeq ChiTaRs ChiTaRs OTP-PACRG OTP chr5 76931867 PACRG chr6 163536378 Exonic hg19 NA AI690188 Out-of-frame Inter-chr q14.1 Transcription factor q26 Tumor suppressor gene 113846 ChimerSeq ChiTaRs ChiTaRs ZNF12-CBX3 ZNF12 chr7 6743360 CBX3 chr7 26251162 Exonic hg19 NA BE141848 Out-of-frame Intra-chr p22.1 Transcription factor p15.2 113847 ChimerSeq ChiTaRs ChiTaRs CPSF7-LOC645206 CPSF7 chr11 61171237 LOC645206 chr3 28720834 Exonic hg19 NA AW994038 Out-of-frame Inter-chr q12.2 113848 ChimerSeq ChiTaRs ChiTaRs RNF128-THSD4 RNF128 chrX 106019501 THSD4 chr15 71556023 Exonic hg19 NA AW379188 Out-of-frame Inter-chr q22.3 q23 113849 ChimerSeq ChiTaRs ChiTaRs COL6A3-POSTN COL6A3 chr2 238233218 POSTN chr13 38153220 Exonic hg19 NA BE160978 Out-of-frame Inter-chr q37.3 q13.3 113850 ChimerSeq ChiTaRs ChiTaRs ENTPD2-C1S ENTPD2 chr9 139942662 C1S chr12 7173119 Exonic hg19 NA AA583398 Out-of-frame Inter-chr q34.3 p13.31 113851 ChimerSeq ChiTaRs ChiTaRs HSPA4-HSPA4 HSPA4 chr5 132435314 HSPA4 chr5 132403121 Exonic hg19 NA AU142388 Out-of-frame Intra-chr q31.1 q31.1 113852 ChimerSeq ChiTaRs ChiTaRs RNU11-ZNF26 RNU11 chr1 28975250 ZNF26 chr? 99537 Exonic hg19 NA DA339878 Out-of-frame Inter-chr p35.3 q24.33 Transcription factor 113853 ChimerSeq ChiTaRs ChiTaRs BBX-BBX BBX chr3 107493617 BBX chr3 107497217 Exonic hg19 NA BI032908 In-Frame Intra-chr q13.12 Transcription factor q13.12 Transcription factor 113854 ChimerSeq ChiTaRs ChiTaRs SLC25A44-LMNA SLC25A44 chr1 156164038 LMNA chr1 156100406 Exonic hg19 NA BG339598 5'UTR-5'UTR Intra-chr q22 q22 113855 ChimerSeq ChiTaRs ChiTaRs HS2ST1-KCNJ2-AS1 HS2ST1 chr1 87380768 KCNJ2-AS1 chr17 68164747 Exonic hg19 NA BF947708 Out-of-frame Inter-chr p22.3 q24.3 113856 ChimerSeq ChiTaRs ChiTaRs RASA1-RASA1 RASA1 chr5 86682971 RASA1 chr5 86682893 Exonic hg19 NA AA649728 Out-of-frame Intra-chr q14.3 q14.3 113857 ChimerSeq ChiTaRs ChiTaRs DLG1-P2RX5 DLG1 chr3 197060832 P2RX5 chr17 3572117 Exonic hg19 NA BQ878018 Out-of-frame Inter-chr q29 Tumor suppressor gene p13.2 113858 ChimerSeq ChiTaRs ChiTaRs AHDC1-TMSB10 AHDC1 chr1 27930102 TMSB10 chr2 85133697 Exonic hg19 NA BC042058 Out-of-frame Inter-chr p35.3 Transcription factor p11.2 113859 ChimerSeq ChiTaRs ChiTaRs YKT6-YKT6 YKT6 chr7 44253487 YKT6 chr7 44253492 Exonic hg19 NA BF851378 Out-of-frame Intra-chr p13 p13 113860 ChimerSeq ChiTaRs ChiTaRs PSMD5-PSMD5 PSMD5 chr9 123579560 PSMD5 chr9 123579158 Exonic hg19 NA BI005318 Out-of-frame Intra-chr q33.2 q33.2 113861 ChimerSeq ChiTaRs ChiTaRs USMG5-NCL USMG5 chr10 105156234 NCL chr2 232323069 Exonic hg19 NA DA952888 Out-of-frame Inter-chr q24.33 q37.1 113862 ChimerSeq ChiTaRs ChiTaRs DPYD-KXD1 DPYD chr1 97929547 KXD1 chr19 18670041 Exonic hg19 NA CN412218 Out-of-frame Inter-chr p21.3 Oncogene p13.11 113863 ChimerSeq ChiTaRs ChiTaRs H19-CTSB H19 chr11 2018408 CTSB chr8 11704566 Exonic hg19 NA AI110608 Out-of-frame Inter-chr p15.5 Tumor suppressor gene p23.1 113864 ChimerSeq ChiTaRs ChiTaRs TMEM232-USP22 TMEM232 chr5 110036335 USP22 chr17 20905368 Exonic hg19 NA BF995298 Out-of-frame Inter-chr q22.1 p11.2 113865 ChimerSeq ChiTaRs ChiTaRs SLC6A14-SLC6A14 SLC6A14 chrX 115580207 SLC6A14 chrX 115580202 Exonic hg19 NA BU685498 Out-of-frame Intra-chr q23 q23 113866 ChimerSeq ChiTaRs ChiTaRs MRPL30-RPS23 MRPL30 chr2 99879093 RPS23 chr5 81571879 Exonic hg19 NA CB217558 Out-of-frame Inter-chr q11.2 q14.2 113867 ChimerSeq ChiTaRs ChiTaRs RUSC2-RUSC2 RUSC2 chr9 35561892 RUSC2 chr9 35560549 Exonic hg19 NA CD368418 Out-of-frame Intra-chr p13.3 p13.3 113868 ChimerSeq ChiTaRs ChiTaRs HAPLN1-GNAS HAPLN1 chr5 83016748 GNAS chr20 57470665 Exonic hg19 NA CN403028 Out-of-frame Inter-chr q14.3 q13.32 Oncogene 113869 ChimerSeq ChiTaRs ChiTaRs GUK1-KDM5C GUK1 chr1 228336098 KDM5C chrX 53228198 Exonic hg19 NA BE939838 Out-of-frame Inter-chr q42.13 p11.22 Oncogene 113870 ChimerSeq ChiTaRs ChiTaRs NDUFS2-RNF167 NDUFS2 chr1 161184185 RNF167 chr17 4848320 Exonic hg19 NA N51398 Out-of-frame Inter-chr q23.3 p13.2 113871 ChimerSeq ChiTaRs ChiTaRs NSUN2-SOCS3 NSUN2 chr5 6601647 SOCS3 chr17 76352950 Exonic hg19 NA AW362678 Out-of-frame Inter-chr p15.31 q25.3 Tumor suppressor gene 113872 ChimerSeq ChiTaRs ChiTaRs KIAA2026-KIAA2026 KIAA2026 chr9 5968186 KIAA2026 chr9 5954051 Exonic hg19 NA AA287088 Out-of-frame Intra-chr p24.1 p24.1 113873 ChimerSeq ChiTaRs ChiTaRs FHL1-COX6C FHL1 chrX 135293137 COX6C chr8 100899724 Exonic hg19 NA BF825718 Out-of-frame Inter-chr q26.3 Tumor suppressor gene q22.2 113874 ChimerSeq ChiTaRs ChiTaRs ARID4B-SLC4A7 ARID4B chr1 235433741 SLC4A7 chr3 27414753 Exonic hg19 NA BF844858 Out-of-frame Inter-chr q42.3 p24.1 113875 ChimerSeq ChiTaRs ChiTaRs ARMCX2-ARMCX2 ARMCX2 chrX 100910575 ARMCX2 chrX 100910593 Exonic hg19 NA BE843388 Out-of-frame Intra-chr q22.1 q22.1 113876 ChimerSeq ChiTaRs ChiTaRs TMEM41B-TMEM41B TMEM41B chr11 9303100 TMEM41B chr11 9303105 Exonic hg19 NA CB241148 Out-of-frame Intra-chr p15.4 p15.4 113877 ChimerSeq ChiTaRs ChiTaRs ZNF281-ZNF281 ZNF281 chr1 200376235 ZNF281 chr1 200376565 Exonic hg19 NA BM979458 Out-of-frame Intra-chr q32.1 Transcription factor q32.1 Transcription factor 113878 ChimerSeq ChiTaRs ChiTaRs SLC12A8-SLC12A8 SLC12A8 chr3 124949966 SLC12A8 chr3 124949961 Exonic hg19 NA H89198 Out-of-frame Intra-chr q21.2 q21.2 113879 ChimerSeq ChiTaRs ChiTaRs THBS2-THBS2 THBS2 chr6 169644422 THBS2 chr6 169641560 Exonic hg19 NA AI954258 Out-of-frame Intra-chr q27 q27 113880 ChimerSeq ChiTaRs ChiTaRs ST6GAL1-ST6GAL1 ST6GAL1 chr3 186795245 ST6GAL1 chr3 186681643 Exonic hg19 NA DR002138 Out-of-frame Intra-chr q27.3 q27.3 113881 ChimerSeq ChiTaRs ChiTaRs ATG9A-SNTG2 ATG9A chr2 220088872 SNTG2 chr2 1182673 Exonic hg19 NA T07088 Out-of-frame Intra-chr q35 113882 ChimerSeq ChiTaRs ChiTaRs NCSTN-NCSTN NCSTN chr1 160326425 NCSTN chr1 160325693 Exonic hg19 NA AW993098 Out-of-frame Intra-chr q23.2 q23.2 113883 ChimerSeq ChiTaRs ChiTaRs FBXO42-SHANK3 FBXO42 chr1 16665992 SHANK3 chr22 51122465 Exonic hg19 NA BF155428 Out-of-frame Inter-chr p36.13 113884 ChimerSeq ChiTaRs ChiTaRs ADI1-ADI1 ADI1 chr2 3502784 ADI1 chr2 3502224 Exonic hg19 NA CV569358 Out-of-frame Intra-chr 113885 ChimerSeq ChiTaRs ChiTaRs GRID1-NFIC GRID1 chr10 88122293 NFIC chr19 3464525 Exonic hg19 NA AW296688 Out-of-frame Inter-chr q23.2 p13.3 Transcription factor 113886 ChimerSeq ChiTaRs ChiTaRs NEK1-RPS6KC1 NEK1 chr4 170533775 RPS6KC1 chr1 213415910 Exonic hg19 NA BI596518 Out-of-frame Inter-chr q33 Other:NEK q32.3 113887 ChimerSeq ChiTaRs ChiTaRs KNG1-ALB KNG1 chr3 186435462 ALB chr4 74270004 Exonic hg19 NA DA640348 Out-of-frame Inter-chr q27.3 q13.3 113888 ChimerSeq ChiTaRs ChiTaRs SLC13A4-WDR46 SLC13A4 chr7 135386365 WDR46 chr6 4480740 Exonic hg19 NA BF848338 Out-of-frame Inter-chr q33 113889 ChimerSeq ChiTaRs ChiTaRs CD44-SLC4A2 CD44 chr11 35211434 SLC4A2 chr7 150772771 Exonic hg19 NA BF748398 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene q36.1 113890 ChimerSeq ChiTaRs ChiTaRs HLA-DQB2-NDUFS1 HLA-DQB2 chr6 4061388 NDUFS1 chr2 206997735 Exonic hg19 NA BE842948 Out-of-frame Inter-chr 113891 ChimerSeq ChiTaRs ChiTaRs SEMA3E-SEMA3E SEMA3E chr7 83229469 SEMA3E chr7 83235368 Exonic hg19 NA DA570978 Out-of-frame Intra-chr q21.11 q21.11 113892 ChimerSeq ChiTaRs ChiTaRs UBAC1-UBAC1 UBAC1 chr9 138836940 UBAC1 chr9 138839292 Exonic hg19 NA AA344688 Out-of-frame Intra-chr q34.3 q34.3 113893 ChimerSeq ChiTaRs ChiTaRs TXLNA-TXLNA TXLNA chr1 32647072 TXLNA chr1 32662178 Exonic hg19 NA BE932678 Out-of-frame Intra-chr p35.2 p35.2 113894 ChimerSeq ChiTaRs ChiTaRs MUC13-EGFR MUC13 chr3 124624444 EGFR chr7 55193914 Exonic hg19 NA AW006478 Out-of-frame Inter-chr q21.2 p11.2 TK:EGFR Oncogene 113895 ChimerSeq ChiTaRs ChiTaRs RABGEF1-FNBP4 RABGEF1 chr7 66117548 FNBP4 chr11 47749192 Exonic hg19 NA AW366358 Out-of-frame Inter-chr q11.21 p11.2 113896 ChimerSeq ChiTaRs ChiTaRs HSPG2-HSPG2 HSPG2 chr1 22242274 HSPG2 chr1 22206711 Exonic hg19 NA AW604468 Out-of-frame Intra-chr p36.12 p36.12 113897 ChimerSeq ChiTaRs ChiTaRs COPS8-FAM19A1 COPS8 chr2 238006592 FAM19A1 chr3 68194647 Exonic hg19 NA BE694718 Out-of-frame Inter-chr q37.3 p14.1 113898 ChimerSeq ChiTaRs ChiTaRs PPP1R15B-DISP1 PPP1R15B chr1 204379761 DISP1 chr1 222999414 Exonic hg19 NA BF772858 Out-of-frame Intra-chr q32.1 q41 113899 ChimerSeq ChiTaRs ChiTaRs MYLK-AS1-MYLK-AS1 MYLK-AS1 chr3 123337541 MYLK-AS1 chr3 123332927 Exonic hg19 NA AA635268 Out-of-frame Intra-chr q21.1 q21.1 Tumor suppressor gene 113900 ChimerSeq ChiTaRs ChiTaRs SCOC-TACC1 SCOC chr4 141303704 TACC1 chr8 38684820 Exonic hg19 NA AA043208 Out-of-frame Inter-chr q31.1 p11.22 113901 ChimerSeq ChiTaRs ChiTaRs STON1-GTF2A1L-ACOT13 STON1-GTF2A1L chr2 48982863 ACOT13 chr6 24705092 Exonic hg19 NA AK123498 Out-of-frame Inter-chr p16.3 p22.3 113902 ChimerSeq ChiTaRs ChiTaRs EIF2C4-FN1 EIF2C4 chr1 36321712 FN1 chr2 216300534 Exonic hg19 NA BI049788 Out-of-frame Inter-chr q35 Oncogene 113903 ChimerSeq ChiTaRs ChiTaRs GSDMD-GSDMD GSDMD chr8 144643984 GSDMD chr8 144640541 Exonic hg19 NA BM472278 Out-of-frame Intra-chr 113904 ChimerSeq ChiTaRs ChiTaRs WDR26-WDR70 WDR26 chr1 224621879 WDR70 chr5 37743572 Exonic hg19 NA BF509638 Out-of-frame Inter-chr q42.12 p13.2 113905 ChimerSeq ChiTaRs ChiTaRs EIF3B-COL6A6 EIF3B chr7 2411865 COL6A6 chr3 130311389 Exonic hg19 NA BQ376118 Out-of-frame Inter-chr p22.3 q22.1 113906 ChimerSeq ChiTaRs ChiTaRs PXT1-FBXL5 PXT1 chr6 36401870 FBXL5 chr4 15606810 Exonic hg19 NA T18548 Out-of-frame Inter-chr p21.31 p15.32 113907 ChimerSeq ChiTaRs ChiTaRs PRKCE-PRKCE PRKCE chr2 46242825 PRKCE chr2 46242544 Exonic hg19 NA AA877048 Out-of-frame Intra-chr p21 Tumor suppressor gene p21 Tumor suppressor gene 113908 ChimerSeq ChiTaRs ChiTaRs GSN-GSN GSN chr9 124094878 GSN chr9 124083586 Exonic hg19 NA H51498 Out-of-frame Intra-chr q33.2 Tumor suppressor gene q33.2 Tumor suppressor gene 113909 ChimerSeq ChiTaRs ChiTaRs NUDT3-SORBS2 NUDT3 chr6 34349556 SORBS2 chr4 186726911 Exonic hg19 NA BF326208 Out-of-frame Inter-chr p21.31 q35.1 113910 ChimerSeq ChiTaRs ChiTaRs CBLB-LIMCH1 CBLB chr3 105563994 LIMCH1 chr4 41617387 Exonic hg19 NA CV401048 Out-of-frame Inter-chr q13.11 p13 113911 ChimerSeq ChiTaRs ChiTaRs KCNIP4-GSN KCNIP4 chr4 21463066 GSN chr9 124093662 Exonic hg19 NA BQ477488 Out-of-frame Inter-chr p15.2 q33.2 Tumor suppressor gene 113912 ChimerSeq ChiTaRs ChiTaRs TCP1-ACAT2 TCP1 chr6 160201014 ACAT2 chr6 160199894 Exonic hg19 NA BE893428 Out-of-frame Intra-chr q25.3 q25.3 113913 ChimerSeq ChiTaRs ChiTaRs C7orf49-C7orf49 C7orf49 chr7 134846435 C7orf49 chr7 134846395 Exonic hg19 NA BF759358 Out-of-frame Intra-chr q33 q33 113914 ChimerSeq ChiTaRs ChiTaRs PTPRD-FAU PTPRD chr9 8316140 FAU chr11 64888106 Exonic hg19 NA DR979128 Out-of-frame Inter-chr Oncogene Tumor suppressor gene q13.1 113915 ChimerSeq ChiTaRs ChiTaRs KLHDC3-CTNND2 KLHDC3 chr6 42989028 CTNND2 chr5 11094593 Exonic hg19 NA BI520168 Out-of-frame Inter-chr p21.1 p15.2 113916 ChimerSeq ChiTaRs ChiTaRs CD34-CD34 CD34 chr1 208060020 CD34 chr1 208059993 Exonic hg19 NA AJ714388 Out-of-frame Intra-chr q32.2 q32.2 113917 ChimerSeq ChiTaRs ChiTaRs SNRNP200-ABCA1 SNRNP200 chr2 96967435 ABCA1 chr9 107639717 Exonic hg19 NA BF988288 Out-of-frame Inter-chr q11.2 q31.1 113918 ChimerSeq ChiTaRs ChiTaRs FBXO36-OSBP2 FBXO36 chr2 230875925 OSBP2 chr22 31303428 Exonic hg19 NA AI624908 Out-of-frame Inter-chr q36.3 q12.2 113919 ChimerSeq ChiTaRs ChiTaRs MED27-UVRAG MED27 chr9 134799436 UVRAG chr11 75635697 Exonic hg19 NA AK026378 Out-of-frame Inter-chr q34.13 q13.5 Tumor suppressor gene 113920 ChimerSeq ChiTaRs ChiTaRs IDS-IDS IDS chrX 148587686 IDS chrX 148592898 Exonic hg19 NA CB268858 Out-of-frame Intra-chr q28 q28 113921 ChimerSeq ChiTaRs ChiTaRs MEGF9-AP1G1 MEGF9 chr9 123367093 AP1G1 chr16 71783841 Exonic hg19 NA T06178 Out-of-frame Inter-chr q33.2 q22.2 113922 ChimerSeq ChiTaRs ChiTaRs SH3GLB1-CSNK2A1 SH3GLB1 chr1 87208110 CSNK2A1 chr20 488014 Exonic hg19 NA AW610498 Out-of-frame Inter-chr p22.3 Tumor suppressor gene p13 Oncogene 113923 ChimerSeq ChiTaRs ChiTaRs CDC42-GXYLT1 CDC42 chr1 22392675 GXYLT1 chr12 42480488 Exonic hg19 NA BF817918 Out-of-frame Inter-chr p36.12 q12 113924 ChimerSeq ChiTaRs ChiTaRs DCAF10-DCAF10 DCAF10 chr9 37861705 DCAF10 chr9 37861685 Exonic hg19 NA BM711158 Out-of-frame Intra-chr p13.2 p13.2 113925 ChimerSeq ChiTaRs ChiTaRs CD74-CD74 CD74 chr5 149781367 CD74 chr5 149781359 Exonic hg19 NA H20268 Out-of-frame Intra-chr q33.1 q33.1 113926 ChimerSeq ChiTaRs ChiTaRs MCPH1-MCPH1 MCPH1 chr8 6378817 MCPH1 chr8 6371346 Exonic hg19 NA DB382708 Out-of-frame Intra-chr p23.1 Tumor suppressor gene p23.1 Tumor suppressor gene 113927 ChimerSeq ChiTaRs ChiTaRs ARL15-KCNIP4 ARL15 chr5 53444369 KCNIP4 chr4 20888660 Exonic hg19 NA BE144288 Out-of-frame Inter-chr q11.2 p15.2 113928 ChimerSeq ChiTaRs ChiTaRs CAMSAP2-CCNL1 CAMSAP2 chr1 200809254 CCNL1 chr3 156873104 Exonic hg19 NA CV421808 Out-of-frame Inter-chr q32.1 q25.31 113929 ChimerSeq ChiTaRs ChiTaRs MLL5-MLL5 MLL5 chr7 104752797 MLL5 chr7 104703868 Exonic hg19 NA AK024088 Out-of-frame Intra-chr 113930 ChimerSeq ChiTaRs ChiTaRs NAMPT-CD69 NAMPT chr7 105925396 CD69 chr12 9907664 Exonic hg19 NA DB135958 Out-of-frame Inter-chr q22.3 p13.31 113931 ChimerSeq ChiTaRs ChiTaRs LPP-CHSY1 LPP chr3 187972215 CHSY1 chr15 101772190 Exonic hg19 NA BF988508 Out-of-frame Inter-chr q27.3 Oncogene q26.3 113932 ChimerSeq ChiTaRs ChiTaRs TNK2-CELF1 TNK2 chr3 195599250 CELF1 chr11 47493282 Exonic hg19 NA BF817488 Out-of-frame Inter-chr q29 Oncogene p11.2 113933 ChimerSeq ChiTaRs ChiTaRs ATP6V1G1-ATP6V1G1 ATP6V1G1 chr9 117360349 ATP6V1G1 chr9 117359947 Exonic hg19 NA CA449988 Out-of-frame Intra-chr q32 q32 113934 ChimerSeq ChiTaRs ChiTaRs NXF1-CLEC18A NXF1 chr11 62559952 CLEC18A chr16 70192469 Exonic hg19 NA BE504888 Out-of-frame Inter-chr q12.3 q22.1 113935 ChimerSeq ChiTaRs ChiTaRs MECOM-EYA3 MECOM chr3 169201456 EYA3 chr1 28332228 Exonic hg19 NA BQ948988 Out-of-frame Inter-chr q26.2 Transcription factor p35.3 113936 ChimerSeq ChiTaRs ChiTaRs STK39-PCNX STK39 chr2 168810755 PCNX chr14 71445211 Exonic hg19 NA AI862108 Out-of-frame Inter-chr q24.3 113937 ChimerSeq ChiTaRs ChiTaRs LOC729737-ZNF280D LOC729737 chr1 139413 ZNF280D chr15 56955646 Exonic hg19 NA BF799328 Out-of-frame Inter-chr q21.3 Transcription factor 113938 ChimerSeq ChiTaRs ChiTaRs TCEANC2-TCEANC2 TCEANC2 chr1 54563147 TCEANC2 chr1 54563207 Exonic hg19 NA AW296068 Out-of-frame Intra-chr p32.3 p32.3 113939 ChimerSeq ChiTaRs ChiTaRs APOO-APOO APOO chrX 23851565 APOO chrX 23851470 Exonic hg19 NA CB852408 Out-of-frame Intra-chr p22.11 p22.11 113940 ChimerSeq ChiTaRs ChiTaRs RFX3-PABPC1 RFX3 chr9 3524977 PABPC1 chr8 101718881 Exonic hg19 NA DW419798 Out-of-frame Inter-chr p24.2 Transcription factor q22.3 113941 ChimerSeq ChiTaRs ChiTaRs ZNF326-UBA1 ZNF326 chr1 90493440 UBA1 chrX 47070299 Exonic hg19 NA CB147708 Out-of-frame Inter-chr p22.2 Transcription factor p11.3 113942 ChimerSeq ChiTaRs ChiTaRs SNX30-EXOC4 SNX30 chr9 115636944 EXOC4 chr7 133199583 Exonic hg19 NA AW177638 Out-of-frame Inter-chr q32 q33 113943 ChimerSeq ChiTaRs ChiTaRs SSR1-NOTCH2 SSR1 chr6 7299038 NOTCH2 chr1 120456798 Exonic hg19 NA BF756608 Out-of-frame Inter-chr p24.3 p12 Oncogene Tumor suppressor gene 113944 ChimerSeq ChiTaRs ChiTaRs RPL14-H19 RPL14 chr3 40503767 H19 chr11 2018434 Exonic hg19 NA AA912468 Out-of-frame Inter-chr p22.1 p15.5 Tumor suppressor gene 113945 ChimerSeq ChiTaRs ChiTaRs MARCH7-ERMARD 2007_ 3_ 1_ chr2 160572399 ERMARD chr6 170151718 Exonic hg19 NA DA137418 Out-of-frame Inter-chr 113946 ChimerSeq ChiTaRs ChiTaRs RHAG-COMMD3 RHAG chr6 49598411 COMMD3 chr10 22609102 Exonic hg19 NA H51698 Out-of-frame Inter-chr p12.3 p12.2 113947 ChimerSeq ChiTaRs ChiTaRs RAF1-MSS51 RAF1 chr3 12638275 MSS51 chr10 75183601 Exonic hg19 NA AW968008 Out-of-frame Inter-chr p25.2 TKL:RAF Oncogene q22.2 113948 ChimerSeq ChiTaRs ChiTaRs ZNF398-PARG ZNF398 chr7 148858844 PARG chr10 51127259 Exonic hg19 NA BF899538 Out-of-frame Inter-chr q36.1 Transcription factor q11.23 113949 ChimerSeq ChiTaRs ChiTaRs PLA2G16-PLA2G16 PLA2G16 chr11 63342153 PLA2G16 chr11 63342180 Exonic hg19 NA BE166188 Out-of-frame Intra-chr q13.1 Tumor suppressor gene q13.1 Tumor suppressor gene 113950 ChimerSeq ChiTaRs ChiTaRs CD101-SEC31A CD101 chr1 117576864 SEC31A chr4 83740102 Exonic hg19 NA BF824998 Out-of-frame Inter-chr p13.1 q21.22 113951 ChimerSeq ChiTaRs ChiTaRs C1orf167-C1orf167 C1orf167 chr1 11848489 C1orf167 chr1 11848381 Exonic hg19 NA R21098 Out-of-frame Intra-chr p36.22 p36.22 113952 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-PTPRD INS-IGF2 chr11 2150528 PTPRD chr9 10452374 Exonic hg19 NA BI042758 Out-of-frame Inter-chr p15.5 Oncogene 113953 ChimerSeq ChiTaRs ChiTaRs BRK1-POLR3C BRK1 chr3 10168040 POLR3C chr1 145601551 Exonic hg19 NA W23948 Out-of-frame Inter-chr p25.3 q21.1 113954 ChimerSeq ChiTaRs ChiTaRs CDCP1-CDCP1 CDCP1 chr3 45148280 CDCP1 chr3 45148024 Exonic hg19 NA BG980088 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene 113955 ChimerSeq ChiTaRs ChiTaRs DDX39B-PPY DDX39B chr6 2829961 PPY chr17 42018172 Exonic hg19 NA BP384968 Out-of-frame Inter-chr q21.31 113956 ChimerSeq ChiTaRs ChiTaRs MRPS5-STAT1 MRPS5 chr2 95780919 STAT1 chr2 191859930 Exonic hg19 NA BF765898 Out-of-frame Intra-chr q11.1 q32.2 Tumor suppressor gene Transcription factor 113957 ChimerSeq ChiTaRs ChiTaRs NINJ1-TET2 NINJ1 chr9 95883840 TET2 chr4 106074016 Exonic hg19 NA CB243858 Out-of-frame Inter-chr q22.31 Tumor suppressor gene q24 Oncogene Tumor suppressor gene Transcription factor 113958 ChimerSeq ChiTaRs ChiTaRs BZW2-PPP1R12B BZW2 chr7 16722519 PPP1R12B chr1 202488665 Exonic hg19 NA BE816678 Out-of-frame Inter-chr p21.1 q32.1 113959 ChimerSeq ChiTaRs ChiTaRs C8orf12-C8orf12 C8orf12 chr8 11279234 C8orf12 chr8 11279234 Exonic hg19 NA AW409128 Out-of-frame Intra-chr 113960 ChimerSeq ChiTaRs ChiTaRs C1QC-C1QC C1QC chr1 22973924 C1QC chr1 22974023 Exonic hg19 NA BE769808 Out-of-frame Intra-chr p36.12 p36.12 113961 ChimerSeq ChiTaRs ChiTaRs RPL34-NEK7 RPL34 chr4 109546411 NEK7 chr1 198290707 Exonic hg19 NA AI624448 Out-of-frame Inter-chr q25 q31.3 Other:NEK 113962 ChimerSeq ChiTaRs ChiTaRs ERGIC1-EIF3B ERGIC1 chr5 172341765 EIF3B chr7 2419937 Exonic hg19 NA BF813428 Out-of-frame Inter-chr q35.1 p22.3 113963 ChimerSeq ChiTaRs ChiTaRs HMGN3-HMGN3 HMGN3 chr6 79911277 HMGN3 chr6 79910962 Exonic hg19 NA AA525878 Out-of-frame Intra-chr q14.1 Transcription factor q14.1 Transcription factor 113964 ChimerSeq ChiTaRs ChiTaRs FNDC3B-FNDC3B FNDC3B chr3 172116909 FNDC3B chr3 172116887 Exonic hg19 NA BE548868 Out-of-frame Intra-chr q26.31 q26.31 113965 ChimerSeq ChiTaRs ChiTaRs HSPB1-OBSL1 HSPB1 chr7 75932092 OBSL1 chr2 220432891 Exonic hg19 NA DA537518 Out-of-frame Inter-chr q11.23 q35 113966 ChimerSeq ChiTaRs ChiTaRs SREK1-SREK1 SREK1 chr5 65475169 SREK1 chr5 65474721 Exonic hg19 NA CA312708 Out-of-frame Intra-chr q12.3 q12.3 113967 ChimerSeq ChiTaRs ChiTaRs TKT-TKT TKT chr3 53267203 TKT chr3 53267400 Exonic hg19 NA AW847418 Out-of-frame Intra-chr p21.1 Tumor suppressor gene p21.1 Tumor suppressor gene 113968 ChimerSeq ChiTaRs ChiTaRs PSMD2-PSMD2 PSMD2 chr3 184023617 PSMD2 chr3 184017638 Exonic hg19 NA CO245088 Out-of-frame Intra-chr q27.1 q27.1 113969 ChimerSeq ChiTaRs ChiTaRs HDLBP-HDLBP HDLBP chr2 242194491 HDLBP chr2 242192488 Exonic hg19 NA AA293628 Out-of-frame Intra-chr q37.3 q37.3 113970 ChimerSeq ChiTaRs ChiTaRs UBXN7-UBXN7 UBXN7 chr3 196089181 UBXN7 chr3 196083220 Exonic hg19 NA BE813748 Out-of-frame Intra-chr q29 q29 113971 ChimerSeq ChiTaRs ChiTaRs BSN-BSN BSN chr3 49706373 BSN chr3 49706105 Exonic hg19 NA T33228 Out-of-frame Intra-chr p21.31 p21.31 113972 ChimerSeq ChiTaRs ChiTaRs ITGA10-NTN1 ITGA10 chr1 145543337 NTN1 chr17 9113193 Exonic hg19 NA BF927468 Out-of-frame Inter-chr q21.1 Oncogene p13.1 113973 ChimerSeq ChiTaRs ChiTaRs MBNL1-CALCOCO1 MBNL1 chr3 152049329 CALCOCO1 chr12 54106691 Exonic hg19 NA BF929168 Out-of-frame Inter-chr q25.1 q13.13 113974 ChimerSeq ChiTaRs ChiTaRs HSPB1-DDX17 HSPB1 chr7 75933609 DDX17 chr22 38884189 Exonic hg19 NA AI123558 Out-of-frame Inter-chr q11.23 q13.1 113975 ChimerSeq ChiTaRs ChiTaRs LDHA-ATP5G3 LDHA chr11 18427044 ATP5G3 chr2 176043940 Exonic hg19 NA CB143668 Out-of-frame Inter-chr p15.1 q31.1 113976 ChimerSeq ChiTaRs ChiTaRs CRIM1-ANKRD12 CRIM1 chr2 36630721 ANKRD12 chr18 9256127 Exonic hg19 NA BG623368 Out-of-frame Inter-chr p22.2 p11.22 113977 ChimerSeq ChiTaRs ChiTaRs SLC4A5-SLC4A5 SLC4A5 chr2 74460606 SLC4A5 chr2 74462344 Exonic hg19 NA AA452938 Out-of-frame Intra-chr p13.1 p13.1 113978 ChimerSeq ChiTaRs ChiTaRs FSCN1-CALM1 FSCN1 chr7 5646068 CALM1 chr14 90871328 Exonic hg19 NA M78058 Out-of-frame Inter-chr p22.1 q32.11 113979 ChimerSeq ChiTaRs ChiTaRs LPXN-LAMA3 LPXN chr11 58343306 LAMA3 chr18 21464735 Exonic hg19 NA X77598 Out-of-frame Inter-chr q12.1 q11.2 113980 ChimerSeq ChiTaRs ChiTaRs EFHC1-B3GAT1 EFHC1 chr6 52285577 B3GAT1 chr11 134259170 Exonic hg19 NA T05978 Out-of-frame Inter-chr p12.2 q25 113981 ChimerSeq ChiTaRs ChiTaRs ZNF804B-KCNA6 ZNF804B chr7 88409002 KCNA6 chr12 4923266 Exonic hg19 NA BF447908 Out-of-frame Inter-chr q21.13 Transcription factor 113982 ChimerSeq ChiTaRs ChiTaRs LOC286467-MTMR3 LOC286467 chrX 130942428 MTMR3 chr22 30423444 Exonic hg19 NA BE764648 Out-of-frame Inter-chr q12.2 113983 ChimerSeq ChiTaRs ChiTaRs HLA-DMA-SLC20A1 HLA-DMA chr6 4347402 SLC20A1 chr2 113421051 Exonic hg19 NA BG996078 Out-of-frame Inter-chr q14.1 113984 ChimerSeq ChiTaRs ChiTaRs RPP14-C14orf37 RPP14 chr3 58295333 C14orf37 chr14 58736850 Exonic hg19 NA BF106328 Out-of-frame Inter-chr p14.3 q23.1 113985 ChimerSeq ChiTaRs ChiTaRs KIAA1244-KIAA1244 KIAA1244 chr6 138496125 KIAA1244 chr6 138495938 Exonic hg19 NA AA568968 Out-of-frame Intra-chr 113986 ChimerSeq ChiTaRs ChiTaRs AKAP9-C21orf49 AKAP9 chr7 91693120 C21orf49 chr21 34159571 Exonic hg19 NA CR738018 Out-of-frame Inter-chr q21.2 Oncogene 113987 ChimerSeq ChiTaRs ChiTaRs GPR110-GPR110 GPR110 chr6 46980034 GPR110 chr6 46980523 Exonic hg19 NA AK055208 Out-of-frame Intra-chr 113988 ChimerSeq ChiTaRs ChiTaRs HCCS-IQSEC1 HCCS chrX 11133036 IQSEC1 chr3 13020548 Exonic hg19 NA BF857908 Out-of-frame Inter-chr p22.2 p25.2 113989 ChimerSeq ChiTaRs ChiTaRs ST5-C1orf177 ST5 chr11 8892573 C1orf177 chr1 55272369 Exonic hg19 NA BG003858 Out-of-frame Inter-chr p15.4 Tumor suppressor gene 113990 ChimerSeq ChiTaRs ChiTaRs CTBP1-CTBP1 CTBP1 chr4 1235951 CTBP1 chr4 1235256 Exonic hg19 NA AA506318 Out-of-frame Intra-chr p16.3 p16.3 113991 ChimerSeq ChiTaRs ChiTaRs CAV1-MCM9 CAV1 chr7 116201228 MCM9 chr6 119134792 Exonic hg19 NA BF196928 Out-of-frame Inter-chr q31.2 Tumor suppressor gene q22.31 Tumor suppressor gene 113992 ChimerSeq ChiTaRs ChiTaRs SMR3B-MAGI1 SMR3B chr4 71255923 MAGI1 chr3 65910286 Exonic hg19 NA BP333058 Out-of-frame Inter-chr q13.3 Oncogene 113993 ChimerSeq ChiTaRs ChiTaRs ITIH5-ITIH5 ITIH5 chr10 7664164 ITIH5 chr10 7663766 Exonic hg19 NA BI055168 Out-of-frame Intra-chr p14 p14 113994 ChimerSeq ChiTaRs ChiTaRs LOC100132167-KAT2B LOC100132167 chr9 45503595 KAT2B chr3 20189733 Exonic hg19 NA AW340758 Out-of-frame Inter-chr p24.3 113995 ChimerSeq ChiTaRs ChiTaRs ENO1-ENO1 ENO1 chr1 8926511 ENO1 chr1 8934884 Exonic hg19 NA U88968 Out-of-frame Intra-chr p36.23 p36.23 113996 ChimerSeq ChiTaRs ChiTaRs PRRC1-PRRC1 PRRC1 chr5 126889859 PRRC1 chr5 126889850 Exonic hg19 NA CN415578 Out-of-frame Intra-chr q23.2 q23.2 113997 ChimerSeq ChiTaRs ChiTaRs KIDINS220-FHAD1 KIDINS220 chr2 8885289 FHAD1 chr1 15663836 Exonic hg19 NA BF917138 Out-of-frame Inter-chr p25.1 p36.21 113998 ChimerSeq ChiTaRs ChiTaRs TMCC1-DDX5 TMCC1 chr3 129392259 DDX5 chr17 62499603 Exonic hg19 NA BG955538 Out-of-frame Inter-chr q22.1 q23.3 113999 ChimerSeq ChiTaRs ChiTaRs RPF2-RPF2 RPF2 chr6 111323070 RPF2 chr6 111322850 Exonic hg19 NA BF734348 Out-of-frame Intra-chr q21 q21 114000 ChimerSeq ChiTaRs ChiTaRs HGSNAT-HGSNAT HGSNAT chr8 43002706 HGSNAT chr8 42995695 Exonic hg19 NA CN256928 Out-of-frame Intra-chr p11.21 p11.21 114001 ChimerSeq ChiTaRs ChiTaRs FAM204A-SLC35B4 FAM204A chr10 120069747 SLC35B4 chr7 133989791 Exonic hg19 NA DB301188 Out-of-frame Inter-chr q26.11 q33 114002 ChimerSeq ChiTaRs ChiTaRs HCLS1-CDK14 HCLS1 chr3 121350396 CDK14 chr7 90385939 Exonic hg19 NA AI656818 Out-of-frame Inter-chr q13.33 q21.13 114003 ChimerSeq ChiTaRs ChiTaRs SYTL4-GPCPD1 SYTL4 chrX 99972080 GPCPD1 chr20 5568688 Exonic hg19 NA AW813838 Out-of-frame Inter-chr q22.1 p12.3 114004 ChimerSeq ChiTaRs ChiTaRs EPHB6-YLPM1 EPHB6 chr7 142568845 YLPM1 chr14 75265100 Exonic hg19 NA DB304338 Out-of-frame Inter-chr q34 Oncogene Tumor suppressor gene q24.3 114005 ChimerSeq ChiTaRs ChiTaRs SLC6A1-ARHGAP35 SLC6A1 chr3 11078588 ARHGAP35 chr19 47487362 Exonic hg19 NA BQ300148 Out-of-frame Inter-chr p25.3 q13.32 Transcription factor 114006 ChimerSeq ChiTaRs ChiTaRs PRKCE-PRKCE PRKCE chr2 46091926 PRKCE chr2 46091190 Exonic hg19 NA BI056548 Out-of-frame Intra-chr p21 Tumor suppressor gene p21 Tumor suppressor gene 114007 ChimerSeq ChiTaRs ChiTaRs TMEM167A-KCNH7 TMEM167A chr5 82363996 KCNH7 chr2 163339722 Exonic hg19 NA BF230028 Out-of-frame Inter-chr q14.2 q24.2 114008 ChimerSeq ChiTaRs ChiTaRs HLA-DRA-HLA-DRA HLA-DRA chr6 3759124 HLA-DRA chr6 3759339 Exonic hg19 NA BF350328 Out-of-frame Intra-chr 114009 ChimerSeq ChiTaRs ChiTaRs CMPK1-NOP58 CMPK1 chr1 47827842 NOP58 chr2 203163103 Exonic hg19 NA BF891408 Out-of-frame Inter-chr p33 Oncogene q33.1 114010 ChimerSeq ChiTaRs ChiTaRs ZMAT3-ZMAT3 ZMAT3 chr3 178742752 ZMAT3 chr3 178742167 Exonic hg19 NA BF346458 Out-of-frame Intra-chr q26.32 q26.32 114011 ChimerSeq ChiTaRs ChiTaRs PROX1-DAB2IP PROX1 chr1 214196646 DAB2IP chr9 124496665 Exonic hg19 NA BG980918 Out-of-frame Inter-chr q32.3 Tumor suppressor gene Transcription factor q33.2 Tumor suppressor gene 114012 ChimerSeq ChiTaRs ChiTaRs SRPK1-SRPK1 SRPK1 chr6 35801792 SRPK1 chr6 35800811 Exonic hg19 NA AL117648 Out-of-frame Intra-chr p21.31 CMGC:SRPK p21.31 CMGC:SRPK 114013 ChimerSeq ChiTaRs ChiTaRs NLGN3-NLGN3 NLGN3 chrX 70387188 NLGN3 chrX 70387197 Exonic hg19 NA BQ340118 Out-of-frame Intra-chr q13.1 q13.1 114014 ChimerSeq ChiTaRs ChiTaRs PDIA3P-NEAT1 PDIA3P chr1 146650244 NEAT1 chr11 65193186 Exonic hg19 NA BQ367308 Out-of-frame Inter-chr q13.1 114015 ChimerSeq ChiTaRs ChiTaRs RUSC2-GH2 RUSC2 chr9 35508705 GH2 chr17 61957574 Exonic hg19 NA BC020828 Out-of-frame Inter-chr p13.3 q23.3 114016 ChimerSeq ChiTaRs ChiTaRs ZEB1-ZNF438 ZEB1 chr10 31608222 ZNF438 chr10 31138096 Exonic hg19 NA DA592038 Out-of-frame Intra-chr p11.22 Transcription factor p11.23 Transcription factor Seq+ 114017 ChimerSeq ChiTaRs ChiTaRs STIM1-DBT STIM1 chr11 3925235 DBT chr1 100660264 Exonic hg19 NA AI432188 Out-of-frame Inter-chr p15.4 p21.2 114018 ChimerSeq ChiTaRs ChiTaRs MTERFD2-FGFR1 MTERFD2 chr2 242035770 FGFR1 chr8 38274902 Exonic hg19 NA T20118 Out-of-frame Inter-chr p11.23 TK:FGFR Oncogene 114019 ChimerSeq ChiTaRs ChiTaRs ACTR1B-FAM53C ACTR1B chr2 98279592 FAM53C chr5 137679630 Exonic hg19 NA BE939238 Out-of-frame Inter-chr q11.2 q31.2 114020 ChimerSeq ChiTaRs ChiTaRs AGPAT4-AGPAT4 AGPAT4 chr6 161551550 AGPAT4 chr6 161551572 Exonic hg19 NA BU071898 Out-of-frame Intra-chr q26 q26 114021 ChimerSeq ChiTaRs ChiTaRs AGBL4-SPAG6 AGBL4 chr1 50321725 SPAG6 chr10 22705847 Exonic hg19 NA BM979038 Out-of-frame Inter-chr p33 p12.2 114022 ChimerSeq ChiTaRs ChiTaRs STX7-STX7 STX7 chr6 132783849 STX7 chr6 132783846 Exonic hg19 NA AA503158 Out-of-frame Intra-chr q23.2 q23.2 114023 ChimerSeq ChiTaRs ChiTaRs PSMB2-PSMB2 PSMB2 chr1 36107120 PSMB2 chr1 36068559 Exonic hg19 NA AA393918 Out-of-frame Intra-chr p34.3 p34.3 114024 ChimerSeq ChiTaRs ChiTaRs RNU11-SHISA5 RNU11 chr1 28975250 SHISA5 chr3 48510769 Exonic hg19 NA DA256228 Out-of-frame Inter-chr p35.3 p21.31 114025 ChimerSeq ChiTaRs ChiTaRs DHDDS-PQBP1 DHDDS chr1 26794460 PQBP1 chrX 48758548 Exonic hg19 NA CV373808 Out-of-frame Inter-chr p36.11 p11.23 114026 ChimerSeq ChiTaRs ChiTaRs SEC61A1-SEC61A1 SEC61A1 chr3 127787654 SEC61A1 chr3 127788221 Exonic hg19 NA AA405428 Out-of-frame Intra-chr q21.3 q21.3 114027 ChimerSeq ChiTaRs ChiTaRs TPM2-MYBPC1 TPM2 chr9 35683079 MYBPC1 chr12 101988788 Exonic hg19 NA AA195988 Out-of-frame Inter-chr p13.3 q23.2 114028 ChimerSeq ChiTaRs ChiTaRs STK17A-STK17A STK17A chr7 43664784 STK17A chr7 43663465 Exonic hg19 NA BM968928 Out-of-frame Intra-chr p13 p13 114029 ChimerSeq ChiTaRs ChiTaRs ICA1L-HIVEP3 ICA1L chr2 203727130 HIVEP3 chr1 42047723 Exonic hg19 NA BM152878 Out-of-frame Inter-chr q33.2 p34.2 Tumor suppressor gene Transcription factor 114030 ChimerSeq ChiTaRs ChiTaRs GNL1-GNL1 GNL1 chr6 1852565 GNL1 chr6 1853463 Exonic hg19 NA BF852168 Out-of-frame Intra-chr 114031 ChimerSeq ChiTaRs ChiTaRs FBXL7-ARFGEF1 FBXL7 chr5 15771409 ARFGEF1 chr8 68118200 Exonic hg19 NA BI041488 Out-of-frame Inter-chr p15.1 q13.2 114032 ChimerSeq ChiTaRs ChiTaRs GNPDA1-GNPDA1 GNPDA1 chr5 141380640 GNPDA1 chr5 141380241 Exonic hg19 NA W00428 Out-of-frame Intra-chr q31.3 q31.3 114033 ChimerSeq ChiTaRs ChiTaRs ACTB-FMN1 ACTB chr7 5568820 FMN1 chr15 33261500 Exonic hg19 NA BQ320988 Out-of-frame Inter-chr p22.1 114034 ChimerSeq ChiTaRs ChiTaRs EGLN1-NRP1 EGLN1 chr1 231525414 NRP1 chr10 33477160 Exonic hg19 NA BU150658 Out-of-frame Inter-chr q42.2 Tumor suppressor gene p11.22 114035 ChimerSeq ChiTaRs ChiTaRs ZMIZ2-C14orf166 ZMIZ2 chr7 44802883 C14orf166 chr14 52466456 Exonic hg19 NA BI059838 Out-of-frame Inter-chr p13 q22.1 114036 ChimerSeq ChiTaRs ChiTaRs PRKD3-PRKD3 PRKD3 chr2 37479407 PRKD3 chr2 37478864 Exonic hg19 NA CN354928 Out-of-frame Intra-chr p22.2 p22.2 114037 ChimerSeq ChiTaRs ChiTaRs USO1-SECISBP2L USO1 chr4 76735362 SECISBP2L chr15 49308802 Exonic hg19 NA H20018 Out-of-frame Inter-chr q21.1 q21.1 114038 ChimerSeq ChiTaRs ChiTaRs CHCHD3-CHCHD3 CHCHD3 chr7 132720694 CHCHD3 chr7 132720266 Exonic hg19 NA W28818 Out-of-frame Intra-chr q33 Transcription factor q33 Transcription factor 114039 ChimerSeq ChiTaRs ChiTaRs COL16A1-EXOC6B COL16A1 chr1 32148821 EXOC6B chr2 72617870 Exonic hg19 NA AW444528 Out-of-frame Inter-chr p35.2 p13.2 114040 ChimerSeq ChiTaRs ChiTaRs UBAP2-FBXL2 UBAP2 chr9 33923950 FBXL2 chr3 33397409 Exonic hg19 NA BI009388 Out-of-frame Inter-chr p13.3 p22.3 114041 ChimerSeq ChiTaRs ChiTaRs QKI-QKI QKI chr6 163870852 QKI chr6 163869132 Exonic hg19 NA DW433368 Out-of-frame Intra-chr q26 q26 114042 ChimerSeq ChiTaRs ChiTaRs SLC34A3-SEPT9 SLC34A3 chr9 140124420 2009_ 9_ 1_ chr17 75428114 Exonic hg19 NA BF736738 Out-of-frame Inter-chr q34.3 114043 ChimerSeq ChiTaRs ChiTaRs RPLP2-BOD1L1 RPLP2 chr11 812874 BOD1L1 chr4 13601214 Exonic hg19 NA DB355988 Out-of-frame Inter-chr p15.5 p15.33 114044 ChimerSeq ChiTaRs ChiTaRs MIR29B2-MIR29B2 MIR29B2 chr1 207984748 MIR29B2 chr1 207988882 Exonic hg19 NA AW298008 Out-of-frame Intra-chr q32.2 q32.2 114045 ChimerSeq ChiTaRs ChiTaRs SECISBP2-SECISBP2 SECISBP2 chr9 91939671 SECISBP2 chr9 91939220 Exonic hg19 NA CV416238 Out-of-frame Intra-chr q22.2 q22.2 114046 ChimerSeq ChiTaRs ChiTaRs ECT2L-ZEB1 ECT2L chr6 139134364 ZEB1 chr10 31816026 Exonic hg19 NA CK004958 Out-of-frame Inter-chr q24.1 p11.22 Transcription factor 114047 ChimerSeq ChiTaRs ChiTaRs CUX1-CUX1 CUX1 chr7 101652962 CUX1 chr7 101573276 Exonic hg19 NA BE143748 Out-of-frame Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 Tumor suppressor gene Transcription factor 114048 ChimerSeq ChiTaRs ChiTaRs CWC27-CWC27 CWC27 chr5 64064994 CWC27 chr5 64064973 Exonic hg19 NA BG170618 Out-of-frame Intra-chr q12.3 q12.3 114049 ChimerSeq ChiTaRs ChiTaRs PLOD3-MPV17 PLOD3 chr7 100849367 MPV17 chr2 27535566 Exonic hg19 NA CB115918 Out-of-frame Inter-chr q22.1 p23.3 114050 ChimerSeq ChiTaRs ChiTaRs GOLM1-UHMK1 GOLM1 chr9 88826884 UHMK1 chr1 162499287 Exonic hg19 NA BX647888 Out-of-frame Inter-chr q21.33 q23.3 114051 ChimerSeq ChiTaRs ChiTaRs RYR2-TUBB6 RYR2 chr1 237787116 TUBB6 chr18 12324898 Exonic hg19 NA AA416878 Out-of-frame Inter-chr q43 p11.21 114052 ChimerSeq ChiTaRs ChiTaRs AHCYL1-CDK6 AHCYL1 chr1 110564995 CDK6 chr7 92366341 Exonic hg19 NA AI862468 Out-of-frame Inter-chr p13.3 Tumor suppressor gene q21.2 CMGC:CDK Oncogene Tumor suppressor gene 114053 ChimerSeq ChiTaRs ChiTaRs NAALADL2-CAMK2N1 NAALADL2 chr3 175285094 CAMK2N1 chr1 20809835 Exonic hg19 NA BE927948 Out-of-frame Inter-chr q26.31 p36.12 Tumor suppressor gene 114054 ChimerSeq ChiTaRs ChiTaRs FAM20B-CRK FAM20B chr1 179041524 CRK chr17 1356806 Exonic hg19 NA BE706868 Out-of-frame Inter-chr q25.2 p13.3 114055 ChimerSeq ChiTaRs ChiTaRs TDRD7-PRR16 TDRD7 chr9 100255199 PRR16 chr5 120022337 Exonic hg19 NA BG117378 Out-of-frame Inter-chr q22.33 q23.1 114056 ChimerSeq ChiTaRs ChiTaRs CASK-COX7A2 CASK chrX 41552622 COX7A2 chr6 75949415 Exonic hg19 NA DA259498 Out-of-frame Inter-chr p11.4 CAMK:CASK q14.1 114057 ChimerSeq ChiTaRs ChiTaRs LIPA-PRELP LIPA chr10 90978130 PRELP chr1 203458346 Exonic hg19 NA DA313778 Out-of-frame Inter-chr q23.31 q32.1 114058 ChimerSeq ChiTaRs ChiTaRs NR3C1-NR3C1 NR3C1 chr5 142657727 NR3C1 chr5 142657741 Exonic hg19 NA DR980088 Out-of-frame Intra-chr q31.3 Transcription factor q31.3 Transcription factor 114059 ChimerSeq ChiTaRs ChiTaRs CLASP1-NR4A1 CLASP1 chr2 122288584 NR4A1 chr12 52445226 Exonic hg19 NA DB018378 Out-of-frame Inter-chr q14.3 q13.13 Tumor suppressor gene Transcription factor 114060 ChimerSeq ChiTaRs ChiTaRs RHOA-RHOA RHOA chr3 49397592 RHOA chr3 49397585 Exonic hg19 NA AW189178 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Oncogene Tumor suppressor gene 114061 ChimerSeq ChiTaRs ChiTaRs DAB1-NDUFA4 DAB1 chr1 57755808 NDUFA4 chr7 10978490 Exonic hg19 NA T12168 Out-of-frame Inter-chr p32.1 p21.3 114062 ChimerSeq ChiTaRs ChiTaRs TES-SLC12A6 TES chr7 115898670 SLC12A6 chr15 34524726 Exonic hg19 NA AA142838 Out-of-frame Inter-chr q31.2 Tumor suppressor gene q14 114063 ChimerSeq ChiTaRs ChiTaRs GALNTL4-DZIP3 GALNTL4 chr11 11292697 DZIP3 chr3 108409872 Exonic hg19 NA BE222888 Out-of-frame Inter-chr q13.13 114064 ChimerSeq ChiTaRs ChiTaRs TMEM64-TMEM64 TMEM64 chr8 91634417 TMEM64 chr8 91634943 Exonic hg19 NA BF054968 Out-of-frame Intra-chr q21.3 q21.3 114065 ChimerSeq ChiTaRs ChiTaRs KIN-KIN KIN chr10 7827515 KIN chr10 7822668 Exonic hg19 NA CV376788 Out-of-frame Intra-chr p14 Transcription factor p14 Transcription factor 114066 ChimerSeq ChiTaRs ChiTaRs ARL10-TRPM3 ARL10 chr5 175800503 TRPM3 chr9 73966491 Exonic hg19 NA AK096568 3'UTR-5'UTR Inter-chr q35.2 q21.13 114067 ChimerSeq ChiTaRs ChiTaRs EVC2-HDAC7 EVC2 chr4 5631094 HDAC7 chr12 48185223 Exonic hg19 NA AI671208 Out-of-frame Inter-chr p16.2 q13.11 114068 ChimerSeq ChiTaRs ChiTaRs B3GALNT1-CBS B3GALNT1 chr3 160801958 CBS chr21 44483505 Exonic hg19 NA BE551948 Out-of-frame Inter-chr q26.1 q22.3 114069 ChimerSeq ChiTaRs ChiTaRs GORASP2-TIAM2 GORASP2 chr2 171811224 TIAM2 chr6 155272905 Exonic hg19 NA BI010428 Out-of-frame Inter-chr q31.1 q25.2 114070 ChimerSeq ChiTaRs ChiTaRs PRDX6-PPP1R8 PRDX6 chr1 173457150 PPP1R8 chr1 28167312 Exonic hg19 NA BM477858 Out-of-frame Intra-chr q25.1 p35.3 114071 ChimerSeq ChiTaRs ChiTaRs MTMR8-MTMR8 MTMR8 chrX 63481787 MTMR8 chrX 63481911 Exonic hg19 NA BU607928 Out-of-frame Intra-chr q11.2 q11.2 114072 ChimerSeq ChiTaRs ChiTaRs HNRNPD-HNRNPD HNRNPD chr4 83293322 HNRNPD chr4 83284057 Exonic hg19 NA BG999638 Out-of-frame Intra-chr q21.22 q21.22 114073 ChimerSeq ChiTaRs ChiTaRs ARIH2-ARIH2 ARIH2 chr3 49021053 ARIH2 chr3 49021574 Exonic hg19 NA CK299468 Out-of-frame Intra-chr p21.31 p21.31 114074 ChimerSeq ChiTaRs ChiTaRs YWHAQ-ENPP3 YWHAQ chr2 9725373 ENPP3 chr6 132062737 Exonic hg19 NA BE936958 Out-of-frame Inter-chr p25.1 q23.2 114075 ChimerSeq ChiTaRs ChiTaRs CIZ1-MANBAL CIZ1 chr9 130929122 MANBAL chr20 35944755 Exonic hg19 NA BI045278 Out-of-frame Inter-chr q34.11 Tumor suppressor gene q11.23 114076 ChimerSeq ChiTaRs ChiTaRs NCBP2-PEX5 NCBP2 chr3 196662667 PEX5 chr12 7362279 Exonic hg19 NA AA625748 Out-of-frame Inter-chr q29 p13.31 114077 ChimerSeq ChiTaRs ChiTaRs GABBR2-GABBR2 GABBR2 chr9 101056168 GABBR2 chr9 101151197 Exonic hg19 NA BP311968 Out-of-frame Intra-chr q22.33 q22.33 114078 ChimerSeq ChiTaRs ChiTaRs RBM12B-GPRC5B RBM12B chr8 94746740 GPRC5B chr16 19870298 Exonic hg19 NA AV723288 Out-of-frame Inter-chr q22.1 p12.3 114079 ChimerSeq ChiTaRs ChiTaRs MTHFD1L-MTHFD1L MTHFD1L chr6 151301113 MTHFD1L chr6 151310965 Exonic hg19 NA AW976998 Out-of-frame Intra-chr q25.1 q25.1 114080 ChimerSeq ChiTaRs ChiTaRs CACNA1E-SLC25A15 CACNA1E chr1 181579622 SLC25A15 chr13 41381430 Exonic hg19 NA DA750008 Out-of-frame Inter-chr q25.3 q14.11 114081 ChimerSeq ChiTaRs ChiTaRs WDR77-WDR77 WDR77 chr1 111985982 WDR77 chr1 111983302 Exonic hg19 NA AA428438 Out-of-frame Intra-chr p13.2 p13.2 114082 ChimerSeq ChiTaRs ChiTaRs PSAP-PSAP PSAP chr10 73576666 PSAP chr10 73576249 Exonic hg19 NA AA632698 Out-of-frame Intra-chr q22.1 q22.1 114083 ChimerSeq ChiTaRs ChiTaRs MBD5-EPC2 MBD5 chr2 149133164 EPC2 chr2 149511526 Exonic hg19 NA BE700848 Out-of-frame Intra-chr q23.1 q23.1 114084 ChimerSeq ChiTaRs ChiTaRs HMGN4-FBXO42 HMGN4 chr6 26539864 FBXO42 chr1 16607739 Exonic hg19 NA AI862618 Out-of-frame Inter-chr p22.2 p36.13 114085 ChimerSeq ChiTaRs ChiTaRs CCDC30-SCYL1 CCDC30 chr1 42942305 SCYL1 chr11 65303451 Exonic hg19 NA BQ722688 Out-of-frame Inter-chr p34.2 q13.1 Other:SCY1 Tumor suppressor gene 114086 ChimerSeq ChiTaRs ChiTaRs SPIN1-SPIN1 SPIN1 chr9 91090842 SPIN1 chr9 91090525 Exonic hg19 NA BM710848 Out-of-frame Intra-chr q22.1 q22.1 114087 ChimerSeq ChiTaRs ChiTaRs KDM1B-RUNDC1 KDM1B chr6 18222929 RUNDC1 chr17 41138193 Exonic hg19 NA AK091428 Out-of-frame Inter-chr p22.3 q21.31 114088 ChimerSeq ChiTaRs ChiTaRs PHGDH-UBAC2 PHGDH chr1 120278045 UBAC2 chr13 99896770 Exonic hg19 NA BC004528 Out-of-frame Inter-chr p12 q32.3 114089 ChimerSeq ChiTaRs ChiTaRs NUDCD3-LRRC4C NUDCD3 chr7 44443249 LRRC4C chr11 40579635 Exonic hg19 NA BF961768 Out-of-frame Inter-chr p13 p12 114090 ChimerSeq ChiTaRs ChiTaRs C3orf55-VEPH1 C3orf55 chr3 157271130 VEPH1 chr3 157188222 Exonic hg19 NA DB442498 Out-of-frame Intra-chr q25.32 114091 ChimerSeq ChiTaRs ChiTaRs DOK2-DOK2 DOK2 chr8 21769499 DOK2 chr8 21769756 Exonic hg19 NA BI911198 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p21.3 Tumor suppressor gene 114092 ChimerSeq ChiTaRs ChiTaRs CHD1-RPSA CHD1 chr5 98214872 RPSA chr3 39448210 Exonic hg19 NA AK129928 Out-of-frame Inter-chr q21.1 Tumor suppressor gene p22.1 114093 ChimerSeq ChiTaRs ChiTaRs AUTS2-MGAT4A AUTS2 chr7 69638074 MGAT4A chr2 99239043 Exonic hg19 NA AU253288 Out-of-frame Inter-chr q11.22 q11.2 114094 ChimerSeq ChiTaRs ChiTaRs FADS1-YWHAE FADS1 chr11 61569695 YWHAE chr17 1270940 Exonic hg19 NA AW937108 Out-of-frame Inter-chr q12.2 p13.3 114095 ChimerSeq ChiTaRs ChiTaRs DUSP9-UBB DUSP9 chrX 152916777 UBB chr17 16285234 Exonic hg19 NA BQ654128 Out-of-frame Inter-chr q28 Tumor suppressor gene p11.2 114096 ChimerSeq ChiTaRs ChiTaRs PHF1-PHF1 PHF1 chr6 4864108 PHF1 chr6 4863276 Exonic hg19 NA BE706288 Out-of-frame Intra-chr Transcription factor Transcription factor 114097 ChimerSeq ChiTaRs ChiTaRs AP1S2-AP1S2 AP1S2 chrX 15844416 AP1S2 chrX 15844398 Exonic hg19 NA AA193118 Out-of-frame Intra-chr p22.2 p22.2 114098 ChimerSeq ChiTaRs ChiTaRs MAP2-IQCB1 MAP2 chr2 210598372 IQCB1 chr3 121489056 Exonic hg19 NA BE765658 Out-of-frame Inter-chr q34 q13.33 114099 ChimerSeq ChiTaRs ChiTaRs CHN1-GPN3 CHN1 chr2 175705636 GPN3 chr12 110890729 Exonic hg19 NA AW015028 Out-of-frame Inter-chr q31.1 q24.11 114100 ChimerSeq ChiTaRs ChiTaRs RBPMS-RBPMS RBPMS chr8 30374154 RBPMS chr8 30374358 Exonic hg19 NA AA456988 Out-of-frame Intra-chr p12 p12 114101 ChimerSeq ChiTaRs ChiTaRs ZYX-ZYX ZYX chr7 143088204 ZYX chr7 143078840 Exonic hg19 NA BU616088 Out-of-frame Intra-chr q34 Tumor suppressor gene q34 Tumor suppressor gene 114102 ChimerSeq ChiTaRs ChiTaRs SLC4A4-SLC4A4 SLC4A4 chr4 72412211 SLC4A4 chr4 72413363 Exonic hg19 NA W39298 Out-of-frame Intra-chr q13.3 q13.3 114103 ChimerSeq ChiTaRs ChiTaRs PSAT1-SLC1A4 PSAT1 chr9 80945011 SLC1A4 chr2 65249448 Exonic hg19 NA BC001618 Out-of-frame Inter-chr q21.2 p14 114104 ChimerSeq ChiTaRs ChiTaRs PPARD-ARHGEF1 PPARD chr6 35382913 ARHGEF1 chr19 42387266 Exonic hg19 NA AK090448 CDS-5'UTR Inter-chr p21.31 Transcription factor q13.2 114105 ChimerSeq ChiTaRs ChiTaRs PPP1CB-MIR548N PPP1CB chr2 29022970 MIR548N chr2 179369171 Exonic hg19 NA BF811868 Out-of-frame Intra-chr p23.2 p14.2 114106 ChimerSeq ChiTaRs ChiTaRs HBG2-ZEB2 HBG2 chr11 5531165 ZEB2 chr2 145222999 Exonic hg19 NA AK225738 Out-of-frame Inter-chr p15.4 q22.3 Transcription factor 114107 ChimerSeq ChiTaRs ChiTaRs KAT6B-STARD9 KAT6B chr10 76788833 STARD9 chr15 42918622 Exonic hg19 NA BP193998 Out-of-frame Inter-chr Oncogene q15.2 114108 ChimerSeq ChiTaRs ChiTaRs INTS9-INTS9 INTS9 chr8 28625730 INTS9 chr8 28625801 Exonic hg19 NA AA428208 Out-of-frame Intra-chr p21.1 p21.1 114109 ChimerSeq ChiTaRs ChiTaRs PITHD1-TPCN1 PITHD1 chr1 24106401 TPCN1 chr12 113659243 Exonic hg19 NA BP281668 Out-of-frame Inter-chr p36.11 q24.13 114110 ChimerSeq ChiTaRs ChiTaRs ACTG2-ACTG2 ACTG2 chr2 74143821 ACTG2 chr2 74129591 Exonic hg19 NA T60048 Out-of-frame Intra-chr p13.1 p13.1 114111 ChimerSeq ChiTaRs ChiTaRs ZRANB1-ZDHHC20 ZRANB1 chr10 126675033 ZDHHC20 chr13 21949488 Exonic hg19 NA AA948568 Out-of-frame Inter-chr q26.13 q12.11 114112 ChimerSeq ChiTaRs ChiTaRs QARS-QARS QARS chr3 49137674 QARS chr3 49137689 Exonic hg19 NA BQ330018 Out-of-frame Intra-chr p21.31 p21.31 114113 ChimerSeq ChiTaRs ChiTaRs NBPF9-NBPF9 NBPF9 chr1 145039942 NBPF9 chr1 144326030 Exonic hg19 NA BC071648 Out-of-frame Intra-chr q21.2 q21.2 114114 ChimerSeq ChiTaRs ChiTaRs PDZRN3-PDZRN3 PDZRN3 chr3 73570431 PDZRN3 chr3 73568665 Exonic hg19 NA BI033898 Out-of-frame Intra-chr p13 p13 114115 ChimerSeq ChiTaRs ChiTaRs PPP1R12B-MCL1 PPP1R12B chr1 202536258 MCL1 chr1 150547032 Exonic hg19 NA BQ012814 Out-of-frame Intra-chr q32.1 q21.2 Oncogene 114116 ChimerSeq ChiTaRs ChiTaRs DGKG-RUNX1 DGKG chr3 185906234 RUNX1 chr21 36289624 Exonic hg19 NA BI020438 Out-of-frame Inter-chr q27.3 q22.12 Oncogene Tumor suppressor gene Transcription factor 114117 ChimerSeq ChiTaRs ChiTaRs PCYT1B-GALNT1 PCYT1B chrX 24676354 GALNT1 chr18 33270975 Exonic hg19 NA AI952718 5'UTR-CDS Inter-chr p22.11 q12.2 114118 ChimerSeq ChiTaRs ChiTaRs TMEM68-TMEM68 TMEM68 chr8 56662121 TMEM68 chr8 56661881 Exonic hg19 NA BF380248 Out-of-frame Intra-chr q12.1 q12.1 114119 ChimerSeq ChiTaRs ChiTaRs HLA-F-CD300LB HLA-F chr6 1295554 CD300LB chr17 72517982 Exonic hg19 NA DB314758 Out-of-frame Inter-chr q25.1 114120 ChimerSeq ChiTaRs ChiTaRs HACL1-RBM5 HACL1 chr3 15602232 RBM5 chr3 50154645 Exonic hg19 NA AW269808 Out-of-frame Intra-chr p25.1 p21.31 Tumor suppressor gene 114121 ChimerSeq ChiTaRs ChiTaRs AOAH-AOAH AOAH chr7 36647170 AOAH chr7 36646717 Exonic hg19 NA BF895418 Out-of-frame Intra-chr p14.2 p14.2 114122 ChimerSeq ChiTaRs ChiTaRs CALD1-CALD1 CALD1 chr7 134618096 CALD1 chr7 134617869 Exonic hg19 NA DW442598 Out-of-frame Intra-chr q33 q33 114123 ChimerSeq ChiTaRs ChiTaRs FLNA-C2CD3 FLNA chrX 153577110 C2CD3 chr11 73760382 Exonic hg19 NA BF594578 Out-of-frame Inter-chr q28 Tumor suppressor gene q13.4 114124 ChimerSeq ChiTaRs ChiTaRs MIER1-MIER1 MIER1 chr1 67452054 MIER1 chr1 67451908 Exonic hg19 NA BE165998 Out-of-frame Intra-chr p31.3 p31.3 114125 ChimerSeq ChiTaRs ChiTaRs RBPJ-KIF5B RBPJ chr4 26357102 KIF5B chr10 32298393 Exonic hg19 NA AA644218 Out-of-frame Inter-chr p15.2 Transcription factor p11.22 114126 ChimerSeq ChiTaRs ChiTaRs COL3A1-HSH2D COL3A1 chr2 189873894 HSH2D chr19 16268348 Exonic hg19 NA BF876228 Out-of-frame Inter-chr q32.2 p13.11 114127 ChimerSeq ChiTaRs ChiTaRs SMAD5-SMAD5 SMAD5 chr5 135518421 SMAD5 chr5 135517759 Exonic hg19 NA BF435208 Out-of-frame Intra-chr q31.1 Transcription factor q31.1 Transcription factor 114128 ChimerSeq ChiTaRs ChiTaRs DAB2-ZIM2 DAB2 chr5 39403305 ZIM2 chr19 57327577 Exonic hg19 NA BF996758 Out-of-frame Inter-chr p13.1 Tumor suppressor gene q13.43 Transcription factor 114129 ChimerSeq ChiTaRs ChiTaRs TRUB2-EHD2 TRUB2 chr9 131084616 EHD2 chr19 48225937 Exonic hg19 NA AK130008 Out-of-frame Inter-chr q34.11 q13.33 114130 ChimerSeq ChiTaRs ChiTaRs LGALS8-WAC LGALS8 chr1 236714959 WAC chr10 28897116 Exonic hg19 NA BE082698 Out-of-frame Inter-chr q43 p12.1 114131 ChimerSeq ChiTaRs ChiTaRs ADCY5-ADCY5 ADCY5 chr3 123016764 ADCY5 chr3 123018995 Exonic hg19 NA DA952878 Out-of-frame Intra-chr q21.1 q21.1 114132 ChimerSeq ChiTaRs ChiTaRs SOX6-SOX6 SOX6 chr11 16220066 SOX6 chr11 16222164 Exonic hg19 NA H47728 Out-of-frame Intra-chr p15.2 Transcription factor p15.2 Transcription factor 114133 ChimerSeq ChiTaRs ChiTaRs MAP3K2-RPL22 MAP3K2 chr2 128062459 RPL22 chr1 6246094 Exonic hg19 NA BU858788 Out-of-frame Inter-chr q14.3 STE:STE11 p36.31 114134 ChimerSeq ChiTaRs ChiTaRs HSPA12A-HSPA12A HSPA12A chr10 118444884 HSPA12A chr10 118443028 Exonic hg19 NA BF957608 Out-of-frame Intra-chr q25.3 q25.3 114135 ChimerSeq ChiTaRs ChiTaRs BAP1-ZBTB1 BAP1 chr3 52443802 ZBTB1 chr14 64982504 Exonic hg19 NA BF935978 Out-of-frame Inter-chr p21.1 Oncogene Tumor suppressor gene q23.3 Transcription factor 114136 ChimerSeq ChiTaRs ChiTaRs AGAP9-SERPINA1 AGAP9 chr10 48236381 SERPINA1 chr14 94844710 Exonic hg19 NA AF130068 Out-of-frame Inter-chr q11.22 q32.13 114137 ChimerSeq ChiTaRs ChiTaRs CHI3L1-WISP1 CHI3L1 chr1 203148122 WISP1 chr8 134205543 Exonic hg19 NA AI471078 Out-of-frame Inter-chr q32.1 q24.22 114138 ChimerSeq ChiTaRs ChiTaRs CXCL12-NKAIN3 CXCL12 chr10 44880491 NKAIN3 chr8 63775423 Exonic hg19 NA DQ345518 Out-of-frame Inter-chr q11.21 Tumor suppressor gene q12.3 114139 ChimerSeq ChiTaRs ChiTaRs CMC1-MKLN1 CMC1 chr3 28289699 MKLN1 chr7 131177511 Exonic hg19 NA BP417368 Out-of-frame Inter-chr p24.1 q32.3 114140 ChimerSeq ChiTaRs ChiTaRs MTMR9-MTMR9 MTMR9 chr8 11174267 MTMR9 chr8 11172429 Exonic hg19 NA AW409328 Out-of-frame Intra-chr p23.1 p23.1 114141 ChimerSeq ChiTaRs ChiTaRs WDR47-WDR47 WDR47 chr1 109547254 WDR47 chr1 109513973 Exonic hg19 NA BE702568 Out-of-frame Intra-chr p13.3 p13.3 114142 ChimerSeq ChiTaRs ChiTaRs ABCE1-ZNF827 ABCE1 chr4 146019571 ZNF827 chr4 146791453 Exonic hg19 NA DA769928 5'UTR-CDS Intra-chr q31.21 q31.22 Transcription factor 114143 ChimerSeq ChiTaRs ChiTaRs PHF2-BPTF PHF2 chr9 96441526 BPTF chr17 65908075 Exonic hg19 NA BF090778 Out-of-frame Inter-chr q22.31 q24.2 Transcription factor 114144 ChimerSeq ChiTaRs ChiTaRs RGS3-AFF3 RGS3 chr9 116310727 AFF3 chr2 100547750 Exonic hg19 NA BG013798 Out-of-frame Inter-chr q32 q11.2 Oncogene 114145 ChimerSeq ChiTaRs ChiTaRs TACC2-TACC2 TACC2 chr10 124003761 TACC2 chr10 124003076 Exonic hg19 NA CV413318 Out-of-frame Intra-chr q26.13 q26.13 114146 ChimerSeq ChiTaRs ChiTaRs MLLT4-MLLT4 MLLT4 chr6 168371176 MLLT4 chr6 168371166 Exonic hg19 NA AW276828 Out-of-frame Intra-chr 114147 ChimerSeq ChiTaRs ChiTaRs BTBD9-BTBD9 BTBD9 chr6 38404785 BTBD9 chr6 38404913 Exonic hg19 NA CV406868 Out-of-frame Intra-chr p21.2 p21.2 114148 ChimerSeq ChiTaRs ChiTaRs RTN4-RTN4 RTN4 chr2 55201877 RTN4 chr2 55200683 Exonic hg19 NA AA180908 Out-of-frame Intra-chr p16.1 Tumor suppressor gene p16.1 Tumor suppressor gene 114149 ChimerSeq ChiTaRs ChiTaRs NADK2-BRD2 NADK2 chr5 36218418 BRD2 chr6 4422743 Exonic hg19 NA AW891518 Out-of-frame Inter-chr p13.2 Atypical:BRD 114150 ChimerSeq ChiTaRs ChiTaRs IMPDH2-IMPDH2 IMPDH2 chr3 49061967 IMPDH2 chr3 49061814 Exonic hg19 NA BU675368 Out-of-frame Intra-chr p21.31 p21.31 114151 ChimerSeq ChiTaRs ChiTaRs ZAK-ZAK ZAK chr2 174091779 ZAK chr2 174091509 Exonic hg19 NA AA664658 Out-of-frame Intra-chr TKL:MLK TKL:MLK 114152 ChimerSeq ChiTaRs ChiTaRs CAPZB-CAPZB CAPZB chr1 19669268 CAPZB chr1 19669194 Exonic hg19 NA BX643958 Out-of-frame Intra-chr p36.13 p36.13 114153 ChimerSeq ChiTaRs ChiTaRs TBC1D1-CD47 TBC1D1 chr4 38084601 CD47 chr3 107763651 Exonic hg19 NA BF996478 Out-of-frame Inter-chr p14 q13.12 114154 ChimerSeq ChiTaRs ChiTaRs RUNX1T1-STXBP5 RUNX1T1 chr8 92999257 STXBP5 chr6 147674185 Exonic hg19 NA BX506268 Out-of-frame Inter-chr q21.3 Oncogene q24.3 114155 ChimerSeq ChiTaRs ChiTaRs KIAA1191-MYO9B KIAA1191 chr5 175775359 MYO9B chr19 17243169 Exonic hg19 NA BF527288 Out-of-frame Inter-chr q35.2 p13.11 114156 ChimerSeq ChiTaRs ChiTaRs CALU-CALU CALU chr7 128410753 CALU chr7 128410142 Exonic hg19 NA AA330728 Out-of-frame Intra-chr q32.1 q32.1 114157 ChimerSeq ChiTaRs ChiTaRs GPR37L1-PLXNB3 GPR37L1 chr1 202098634 PLXNB3 chrX 153043019 Exonic hg19 NA AI886978 3'UTR-CDS Inter-chr q32.1 q28 114158 ChimerSeq ChiTaRs ChiTaRs PAPD4-PAPD4 PAPD4 chr5 78919315 PAPD4 chr5 78915433 Exonic hg19 NA BE094038 Out-of-frame Intra-chr q14.1 q14.1 114159 ChimerSeq ChiTaRs ChiTaRs SND1-NRXN3 SND1 chr7 127399436 NRXN3 chr14 79376210 Exonic hg19 NA BG000348 Out-of-frame Inter-chr q32.1 q24.3 114160 ChimerSeq ChiTaRs ChiTaRs OFD1-TINAGL1 OFD1 chrX 13780540 TINAGL1 chr1 32049224 Exonic hg19 NA AW751638 Out-of-frame Inter-chr p22.2 p35.2 114161 ChimerSeq ChiTaRs ChiTaRs HINT1-MYL12A HINT1 chr5 130500937 MYL12A chr18 3247826 Exonic hg19 NA BC011398 Out-of-frame Inter-chr q23.3 Tumor suppressor gene p11.31 114162 ChimerSeq ChiTaRs ChiTaRs PHF16-CNN1 PHF16 chrX 46877758 CNN1 chr19 11660992 Exonic hg19 NA AA468488 Out-of-frame Inter-chr p13.2 Tumor suppressor gene 114163 ChimerSeq ChiTaRs ChiTaRs EIF4G1-MCC EIF4G1 chr3 184053141 MCC chr5 112379256 Exonic hg19 NA BQ009628 Out-of-frame Inter-chr q27.1 q22.2 Tumor suppressor gene 114164 ChimerSeq ChiTaRs ChiTaRs HLA-DRB5-HLA-DRB5 HLA-DRB5 chr6 32485367 HLA-DRB5 chr6 32485372 Exonic hg19 NA AW821848 Out-of-frame Intra-chr p21.32 p21.32 114165 ChimerSeq ChiTaRs ChiTaRs RFC2-RFC2 RFC2 chr7 73661096 RFC2 chr7 73654267 Exonic hg19 NA CK299368 Out-of-frame Intra-chr q11.23 q11.23 114166 ChimerSeq ChiTaRs ChiTaRs ATXN1-LRBA ATXN1 chr6 16715014 LRBA chr4 151289156 Exonic hg19 NA AW889608 Out-of-frame Inter-chr p22.3 q31.3 114167 ChimerSeq ChiTaRs ChiTaRs SLC3A2-SLC3A2 SLC3A2 chr11 62648605 SLC3A2 chr11 62652102 Exonic hg19 NA BF088478 Out-of-frame Intra-chr q12.3 q12.3 114168 ChimerSeq ChiTaRs ChiTaRs SV2A-SV2A SV2A chr1 149875973 SV2A chr1 149876139 Exonic hg19 NA BE250288 Out-of-frame Intra-chr q21.2 q21.2 114169 ChimerSeq ChiTaRs ChiTaRs BRD2-BRD2 BRD2 chr6 4425716 BRD2 chr6 4176049 Exonic hg19 NA AA379698 Out-of-frame Intra-chr Atypical:BRD Atypical:BRD 114170 ChimerSeq ChiTaRs ChiTaRs HIPK3-HIPK3 HIPK3 chr11 33309060 HIPK3 chr11 33307956 Exonic hg19 NA AW899798 Out-of-frame Intra-chr p13 CMGC:DYRK p13 CMGC:DYRK 114171 ChimerSeq ChiTaRs ChiTaRs AKAP9-TRPS1 AKAP9 chr7 91670151 TRPS1 chr8 116426130 Exonic hg19 NA AK000948 Out-of-frame Inter-chr q21.2 Oncogene q23.3 Transcription factor 114172 ChimerSeq ChiTaRs ChiTaRs RASGEF1B-MTOR RASGEF1B chr4 82366349 MTOR chr1 11317826 Exonic hg19 NA BF845998 Out-of-frame Inter-chr q21.22 p36.22 Oncogene 114173 ChimerSeq ChiTaRs ChiTaRs DNA2-DNA2 DNA2 chr10 70229922 DNA2 chr10 70196768 Exonic hg19 NA AW378978 Out-of-frame Intra-chr q21.3 q21.3 114174 ChimerSeq ChiTaRs ChiTaRs RUNX3-RUNX3 RUNX3 chr1 25227615 RUNX3 chr1 25226689 Exonic hg19 NA AW167608 Out-of-frame Intra-chr p36.11 Tumor suppressor gene Transcription factor p36.11 Tumor suppressor gene Transcription factor 114175 ChimerSeq ChiTaRs ChiTaRs IRF2-EMP1 IRF2 chr4 185309119 EMP1 chr12 13369520 Exonic hg19 NA AI355548 Out-of-frame Inter-chr q35.1 Transcription factor p13.1 Tumor suppressor gene 114176 ChimerSeq ChiTaRs ChiTaRs MYT1L-IDH3B MYT1L chr2 2242131 IDH3B chr20 2639303 Exonic hg19 NA BQ366218 Out-of-frame Inter-chr p25.3 Transcription factor p13 114177 ChimerSeq ChiTaRs ChiTaRs RIT1-SPATA13 RIT1 chr1 155876313 SPATA13 chr13 24772401 Exonic hg19 NA BX506288 Out-of-frame Inter-chr q22 q12.12 114178 ChimerSeq ChiTaRs ChiTaRs ZRANB2-AS1-DOK7 ZRANB2-AS1 chr1 71535019 DOK7 chr4 3493838 Exonic hg19 NA L34968 Out-of-frame Inter-chr p31.1 p16.3 Tumor suppressor gene 114179 ChimerSeq ChiTaRs ChiTaRs IL1RAPL1-IL1RAPL1 IL1RAPL1 chrX 29705098 IL1RAPL1 chrX 29714655 Exonic hg19 NA DB359358 Out-of-frame Intra-chr p21.3 p21.3 114180 ChimerSeq ChiTaRs ChiTaRs PIR-FIGF-AMOTL1 PIR-FIGF chrX 15474160 AMOTL1 chr11 94604004 Exonic hg19 NA BU954458 Out-of-frame Inter-chr q21 114181 ChimerSeq ChiTaRs ChiTaRs ZFYVE16-ZFYVE16 ZFYVE16 chr5 79773551 ZFYVE16 chr5 79773528 Exonic hg19 NA BQ428538 Out-of-frame Intra-chr q14.1 q14.1 114182 ChimerSeq ChiTaRs ChiTaRs FAM178B-PRRG1 FAM178B chr2 97652309 PRRG1 chrX 37245850 Exonic hg19 NA BQ226718 Out-of-frame Inter-chr q11.2 p21.1 114183 ChimerSeq ChiTaRs ChiTaRs ARMCX2-ARMCX2 ARMCX2 chrX 100912660 ARMCX2 chrX 100912673 Exonic hg19 NA BI044858 Out-of-frame Intra-chr q22.1 q22.1 114184 ChimerSeq ChiTaRs ChiTaRs RAP1GAP-GLIS3 RAP1GAP chr1 21975869 GLIS3 chr9 3824473 Exonic hg19 NA BU618568 Out-of-frame Inter-chr p36.12 Tumor suppressor gene p24.2 Transcription factor 114185 ChimerSeq ChiTaRs ChiTaRs PSAP-MAP3K5 PSAP chr10 73576366 MAP3K5 chr6 136878752 Exonic hg19 NA CA311128 Out-of-frame Inter-chr q22.1 q23.3 STE:STE11 114186 ChimerSeq ChiTaRs ChiTaRs CHRNB2-CA11 CHRNB2 chr1 154552240 CA11 chr19 49143438 Exonic hg19 NA BF954758 Out-of-frame Inter-chr q21.3 q13.33 Tumor suppressor gene 114187 ChimerSeq ChiTaRs ChiTaRs ZFP36L2-SLAIN2 ZFP36L2 chr2 43449782 SLAIN2 chr4 48425425 Exonic hg19 NA AW080228 Out-of-frame Inter-chr p21 Tumor suppressor gene p11 114188 ChimerSeq ChiTaRs ChiTaRs RAB7A-CSNK2A2 RAB7A chr3 128445215 CSNK2A2 chr16 58194681 Exonic hg19 NA AI077688 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q21 114189 ChimerSeq ChiTaRs ChiTaRs ZNF395-ZNF395 ZNF395 chr8 28210818 ZNF395 chr8 28218400 Exonic hg19 NA DA812458 Out-of-frame Intra-chr p21.1 Transcription factor p21.1 Transcription factor 114190 ChimerSeq ChiTaRs ChiTaRs EIF4A2-TGFBI EIF4A2 chr3 186503752 TGFBI chr5 135364680 Exonic hg19 NA DA027118 Out-of-frame Inter-chr q27.3 q31.1 Tumor suppressor gene 114191 ChimerSeq ChiTaRs ChiTaRs CCDC34-CCDC34 CCDC34 chr11 27384542 CCDC34 chr11 27362258 Exonic hg19 NA BF666038 Out-of-frame Intra-chr p14.1 p14.1 114192 ChimerSeq ChiTaRs ChiTaRs TCTA-TCTA TCTA chr3 49453665 TCTA chr3 49453644 Exonic hg19 NA BE221388 Out-of-frame Intra-chr p21.31 p21.31 114193 ChimerSeq ChiTaRs ChiTaRs WAC-WAC WAC chr10 28908907 WAC chr10 28905106 Exonic hg19 NA BQ774038 Out-of-frame Intra-chr p12.1 p12.1 114194 ChimerSeq ChiTaRs ChiTaRs CCDC90A-NEDD1 CCDC90A chr6 13789346 NEDD1 chr12 97342426 Exonic hg19 NA BF332108 Out-of-frame Inter-chr q23.1 114195 ChimerSeq ChiTaRs ChiTaRs JPX-USP12 JPX chrX 73169107 USP12 chr13 27683622 Exonic hg19 NA BE971228 Out-of-frame Inter-chr q13.2 q12.13 Tumor suppressor gene 114196 ChimerSeq ChiTaRs ChiTaRs PCDH12-DENND3 PCDH12 chr5 141325668 DENND3 chr8 142169348 Exonic hg19 NA BG988938 Out-of-frame Inter-chr q31.3 q24.3 114197 ChimerSeq ChiTaRs ChiTaRs EIF4G2-EIF4G2 EIF4G2 chr11 10819304 EIF4G2 chr11 10818839 Exonic hg19 NA AW837948 Out-of-frame Intra-chr p15.4 p15.4 114198 ChimerSeq ChiTaRs ChiTaRs C10orf32-CCL28 C10orf32 chr10 104622836 CCL28 chr5 43379295 Exonic hg19 NA BX118178 Out-of-frame Inter-chr p12 114199 ChimerSeq ChiTaRs ChiTaRs CCDC142-LAMA2 CCDC142 chr2 74709521 LAMA2 chr6 129813491 Exonic hg19 NA T06308 Out-of-frame Inter-chr p13.1 q22.33 114200 ChimerSeq ChiTaRs ChiTaRs SMO-NPAS3 SMO chr7 128851514 NPAS3 chr14 34161592 Exonic hg19 NA BF929178 Out-of-frame Inter-chr q32.1 Oncogene q13.1 Transcription factor 114201 ChimerSeq ChiTaRs ChiTaRs ABHD6-KLHL24 ABHD6 chr3 58231782 KLHL24 chr3 183397203 Exonic hg19 NA AW384958 Out-of-frame Intra-chr p14.3 q27.1 114202 ChimerSeq ChiTaRs ChiTaRs KCNIP1-KCNIP1 KCNIP1 chr5 169805764 KCNIP1 chr5 169805893 Exonic hg19 NA BF767818 Out-of-frame Intra-chr q35.1 q35.1 114203 ChimerSeq ChiTaRs ChiTaRs LEPROT-LEPROT LEPROT chr1 65900913 LEPROT chr1 65900886 Exonic hg19 NA BQ223948 Out-of-frame Intra-chr p31.3 p31.3 114204 ChimerSeq ChiTaRs ChiTaRs BNC2-ATP7A BNC2 chr9 16634399 ATP7A chrX 77166199 Exonic hg19 NA X69208 Out-of-frame Inter-chr p22.2 Transcription factor q21.1 114205 ChimerSeq ChiTaRs ChiTaRs SQSTM1-PIGR SQSTM1 chr5 179264247 PIGR chr1 207102231 Exonic hg19 NA AA552118 Out-of-frame Inter-chr q35.3 q32.1 114206 ChimerSeq ChiTaRs ChiTaRs FAM135A-NACA FAM135A chr6 71263512 NACA chr12 57106312 Exonic hg19 NA CN271038 Out-of-frame Inter-chr q13 q13.3 114207 ChimerSeq ChiTaRs ChiTaRs LOC728323-FRYL LOC728323 chr2 243064517 FRYL chr4 48542470 Exonic hg19 NA BE001778 Out-of-frame Inter-chr p11 114208 ChimerSeq ChiTaRs ChiTaRs TMEM245-FKBP15 TMEM245 chr9 111801407 FKBP15 chr9 116024985 Exonic hg19 NA BF376848 Out-of-frame Intra-chr q31.3 q32 114209 ChimerSeq ChiTaRs ChiTaRs TRIM56-MAVS TRIM56 chr7 100733187 MAVS chr20 3852281 Exonic hg19 NA BI041328 Out-of-frame Inter-chr q22.1 p13 114210 ChimerSeq ChiTaRs ChiTaRs TF-TF TF chr3 133483752 TF chr3 133475763 Exonic hg19 NA W27988 Out-of-frame Intra-chr q22.1 q22.1 114211 ChimerSeq ChiTaRs ChiTaRs DHX9-PWP1 DHX9 chr1 182856824 PWP1 chr12 108101968 Exonic hg19 NA BU733758 Out-of-frame Inter-chr q25.3 q23.3 114212 ChimerSeq ChiTaRs ChiTaRs TXNDC5-H19 TXNDC5 chr6 7882255 H19 chr11 2018805 Exonic hg19 NA BI053738 Out-of-frame Inter-chr p24.3 p15.5 Tumor suppressor gene 114213 ChimerSeq ChiTaRs ChiTaRs CYCS-MARCH4 CYCS chr7 25164883 2004_ 3_ 1_ chr2 217235066 Exonic hg19 NA BP251018 Out-of-frame Inter-chr p15.3 114214 ChimerSeq ChiTaRs ChiTaRs KLHL8-KLHL8 KLHL8 chr4 88116641 KLHL8 chr4 88116642 Exonic hg19 NA BE072088 Out-of-frame Intra-chr q22.1 q22.1 114215 ChimerSeq ChiTaRs ChiTaRs SYNE1-SYNE1 SYNE1 chr6 152686097 SYNE1 chr6 152686057 Exonic hg19 NA BE826658 Out-of-frame Intra-chr q25.2 Oncogene q25.2 Oncogene 114216 ChimerSeq ChiTaRs ChiTaRs GRIN1-GRIN1 GRIN1 chr9 140063072 GRIN1 chr9 140056481 Exonic hg19 NA BQ636708 Out-of-frame Intra-chr q34.3 q34.3 114217 ChimerSeq ChiTaRs ChiTaRs HS2ST1-PCGF3 HS2ST1 chr1 87483876 PCGF3 chr4 763719 Exonic hg19 NA AW086208 Out-of-frame Inter-chr p22.3 p16.3 114218 ChimerSeq ChiTaRs ChiTaRs LOC389765-PSD LOC389765 chr9 88423816 PSD chr10 104162375 Exonic hg19 NA X99688 5'UTR-3'UTR Inter-chr q24.32 114219 ChimerSeq ChiTaRs ChiTaRs PDLIM5-PDLIM5 PDLIM5 chr4 95497504 PDLIM5 chr4 95497094 Exonic hg19 NA BF912578 Out-of-frame Intra-chr q22.3 q22.3 114220 ChimerSeq ChiTaRs ChiTaRs TESK2-CR2 TESK2 chr1 45953891 CR2 chr1 207644360 Exonic hg19 NA AA834608 Out-of-frame Intra-chr p34.1 TKL:LISK q32.2 114221 ChimerSeq ChiTaRs ChiTaRs TRIM14-TRIM14 TRIM14 chr9 100848374 TRIM14 chr9 100848030 Exonic hg19 NA AW816168 Out-of-frame Intra-chr q22.33 q22.33 114222 ChimerSeq ChiTaRs ChiTaRs LIN7C-SLCO1A2 LIN7C chr11 27516774 SLCO1A2 chr12 21531224 Exonic hg19 NA CA866148 Out-of-frame Inter-chr p14.1 p12.1 114223 ChimerSeq ChiTaRs ChiTaRs RAP2B-RAP2B RAP2B chr3 152882020 RAP2B chr3 152881679 Exonic hg19 NA BQ330068 Out-of-frame Intra-chr q25.2 q25.2 114224 ChimerSeq ChiTaRs ChiTaRs FZD3-ZNF141 FZD3 chr8 28385342 ZNF141 chr4 317886 Exonic hg19 NA BU531878 Out-of-frame Inter-chr p21.1 p16.3 Transcription factor 114225 ChimerSeq ChiTaRs ChiTaRs VMA21-GLIS1 VMA21 chrX 150566070 GLIS1 chr1 54118731 Exonic hg19 NA BF515448 Out-of-frame Inter-chr q28 p32.3 Transcription factor 114226 ChimerSeq ChiTaRs ChiTaRs GNAI3-GNAI3 GNAI3 chr1 110135673 GNAI3 chr1 110135647 Exonic hg19 NA BU508128 Out-of-frame Intra-chr p13.3 p13.3 114227 ChimerSeq ChiTaRs ChiTaRs MME-MME MME chr3 154898954 MME chr3 154864973 Exonic hg19 NA CN417628 Out-of-frame Intra-chr q25.2 Tumor suppressor gene q25.2 Tumor suppressor gene 114228 ChimerSeq ChiTaRs ChiTaRs IARS-IARS IARS chr9 95055998 IARS chr9 95018996 Exonic hg19 NA AU119368 Out-of-frame Intra-chr q22.31 q22.31 114229 ChimerSeq ChiTaRs ChiTaRs ANAPC13-ANAPC13 ANAPC13 chr3 134197113 ANAPC13 chr3 134197363 Exonic hg19 NA BM978388 Out-of-frame Intra-chr q22.2 q22.2 114230 ChimerSeq ChiTaRs ChiTaRs TBC1D5-TMEM50B TBC1D5 chr3 17768612 TMEM50B chr21 34822665 Exonic hg19 NA AA876148 Out-of-frame Inter-chr p24.3 114231 ChimerSeq ChiTaRs ChiTaRs LYAR-LYAR LYAR chr4 4283605 LYAR chr4 4276331 Exonic hg19 NA BG179468 Out-of-frame Intra-chr p16.3 p16.3 114232 ChimerSeq ChiTaRs ChiTaRs LAMC3-LAMC3 LAMC3 chr9 133967263 LAMC3 chr9 133967282 Exonic hg19 NA BQ367188 Out-of-frame Intra-chr q34.12 q34.12 114233 ChimerSeq ChiTaRs ChiTaRs IGFBP5-RALGAPA2 IGFBP5 chr2 217541373 RALGAPA2 chr20 20499986 Exonic hg19 NA BI053318 Out-of-frame Inter-chr q35 Tumor suppressor gene p11.23 114234 ChimerSeq ChiTaRs ChiTaRs H2AFY2-ANXA1 H2AFY2 chr10 71855431 ANXA1 chr9 75775753 Exonic hg19 NA BF805488 Out-of-frame Inter-chr q22.1 q21.13 Tumor suppressor gene 114235 ChimerSeq ChiTaRs ChiTaRs CCNYL1-CCNYL1 CCNYL1 chr2 208614727 CCNYL1 chr2 208614396 Exonic hg19 NA AW979128 Out-of-frame Intra-chr q33.3 q33.3 114236 ChimerSeq ChiTaRs ChiTaRs SHROOM3-CCNI SHROOM3 chr4 77678022 CCNI chr4 77979764 Exonic hg19 NA AV722298 Out-of-frame Intra-chr q21.1 q21.1 114237 ChimerSeq ChiTaRs ChiTaRs GMDS-GMDS GMDS chr6 1626542 GMDS chr6 1629192 Exonic hg19 NA CV573848 Out-of-frame Intra-chr p25.3 p25.3 114238 ChimerSeq ChiTaRs ChiTaRs PTPRK-STAG3 PTPRK chr6 128530504 STAG3 chr7 99800186 Exonic hg19 NA R85198 Out-of-frame Inter-chr Tumor suppressor gene q22.1 114239 ChimerSeq ChiTaRs ChiTaRs ADCY2-TPRG1 ADCY2 chr1 152005074 TPRG1 chr3 188876707 Exonic hg19 NA BU679228 Out-of-frame Inter-chr p15.31 q28 114240 ChimerSeq ChiTaRs ChiTaRs CD81-AUTS2 CD81 chr11 2418062 AUTS2 chr7 69182863 Exonic hg19 NA M85448 Out-of-frame Inter-chr p15.5 q11.22 114241 ChimerSeq ChiTaRs ChiTaRs GRM8-GRM8 GRM8 chr7 126860910 GRM8 chr7 126860978 Exonic hg19 NA EL582588 Out-of-frame Intra-chr q31.33 Oncogene q31.33 Oncogene 114242 ChimerSeq ChiTaRs ChiTaRs ZNF394-RIN3 ZNF394 chr7 99097898 RIN3 chr14 93120621 Exonic hg19 NA BC062588 Out-of-frame Inter-chr q22.1 Transcription factor q32.12 114243 ChimerSeq ChiTaRs ChiTaRs LOC100507391-ARSG LOC100507391 chr3 194460355 ARSG chr17 66358361 Exonic hg19 NA BE010668 Out-of-frame Inter-chr q24.2 114244 ChimerSeq ChiTaRs ChiTaRs TES-MBD2 TES chr7 115898730 MBD2 chr18 51736849 Exonic hg19 NA BF327648 Out-of-frame Inter-chr q31.2 Tumor suppressor gene q21.2 Transcription factor 114245 ChimerSeq ChiTaRs ChiTaRs SNRNP200-SNRNP200 SNRNP200 chr2 96955094 SNRNP200 chr2 96949435 Exonic hg19 NA BE085358 Out-of-frame Intra-chr q11.2 q11.2 114246 ChimerSeq ChiTaRs ChiTaRs ZCCHC4-WAPAL ZCCHC4 chr4 25371664 WAPAL chr10 88200389 Exonic hg19 NA AW977498 Out-of-frame Inter-chr p15.2 114247 ChimerSeq ChiTaRs ChiTaRs HNRNPA3-PTPN1 HNRNPA3 chr2 178088443 PTPN1 chr20 49192473 Exonic hg19 NA BF877638 Out-of-frame Inter-chr q31.2 q13.13 Tumor suppressor gene 114248 ChimerSeq ChiTaRs ChiTaRs NCKAP1-FAM107A NCKAP1 chr2 183841125 FAM107A chr3 58550597 Exonic hg19 NA DA571438 Out-of-frame Inter-chr q32.1 p14.2 114249 ChimerSeq ChiTaRs ChiTaRs CD74-JMJD7-PLA2G4B CD74 chr5 149792314 JMJD7-PLA2G4B chr15 42135870 Exonic hg19 NA DA298568 Out-of-frame Inter-chr q33.1 q15.1 114250 ChimerSeq ChiTaRs ChiTaRs KCMF1-KDM4C KCMF1 chr2 85218771 KDM4C chr9 6835284 Exonic hg19 NA BF894528 Out-of-frame Inter-chr p11.2 Transcription factor p24.1 114251 ChimerSeq ChiTaRs ChiTaRs MAD1L1-MAD1L1 MAD1L1 chr7 2126083 MAD1L1 chr7 2126539 Exonic hg19 NA CV421738 Out-of-frame Intra-chr p22.3 Tumor suppressor gene p22.3 Tumor suppressor gene 114252 ChimerSeq ChiTaRs ChiTaRs ANGEL2-PAPOLA ANGEL2 chr1 213166884 PAPOLA chr14 96988471 Exonic hg19 NA BE882328 Out-of-frame Inter-chr q32.3 q32.2 114253 ChimerSeq ChiTaRs ChiTaRs MCPH1-SSU72 MCPH1 chr8 6501305 SSU72 chr1 1500269 Exonic hg19 NA BG011718 Out-of-frame Inter-chr p23.1 Tumor suppressor gene p36.33 114254 ChimerSeq ChiTaRs ChiTaRs KDM5C-CCDC124 KDM5C chrX 53221815 CCDC124 chr19 18047227 Exonic hg19 NA BQ947948 Out-of-frame Inter-chr p11.22 Oncogene p13.11 114255 ChimerSeq ChiTaRs ChiTaRs LOC401320-IQGAP3 LOC401320 chr7 30601730 IQGAP3 chr1 156517789 Exonic hg19 NA BF814928 Out-of-frame Inter-chr q22 114256 ChimerSeq ChiTaRs ChiTaRs RND3-HSPA8 RND3 chr2 151335433 HSPA8 chr11 122928500 Exonic hg19 NA BF154448 Out-of-frame Inter-chr q23.3 Tumor suppressor gene q24.1 114257 ChimerSeq ChiTaRs ChiTaRs RAB28-C14orf37 RAB28 chr4 13405584 C14orf37 chr14 58719167 Exonic hg19 NA BM721428 Out-of-frame Inter-chr p15.33 q23.1 114258 ChimerSeq ChiTaRs ChiTaRs CD44-CD44 CD44 chr11 35223031 CD44 chr11 35223063 Exonic hg19 NA AW580058 Out-of-frame Intra-chr p13 Oncogene Tumor suppressor gene p13 Oncogene Tumor suppressor gene 114259 ChimerSeq ChiTaRs ChiTaRs NCF2-PITX1 NCF2 chr1 183524996 PITX1 chr5 134364275 Exonic hg19 NA AA872098 Out-of-frame Inter-chr q25.3 q31.1 Transcription factor 114260 ChimerSeq ChiTaRs ChiTaRs ADAM28-ADAM28 ADAM28 chr8 24212605 ADAM28 chr8 24212011 Exonic hg19 NA BU676798 Out-of-frame Intra-chr p21.2 p21.2 114261 ChimerSeq ChiTaRs ChiTaRs MTF2-TSC22D1 MTF2 chr1 93602676 TSC22D1 chr13 45112858 Exonic hg19 NA AI793298 Out-of-frame Inter-chr p22.1 Transcription factor q14.11 Tumor suppressor gene Transcription factor 114262 ChimerSeq ChiTaRs ChiTaRs RPL30-RPL30 RPL30 chr8 99054011 RPL30 chr8 99054000 Exonic hg19 NA BU608418 Out-of-frame Intra-chr q22.2 q22.2 114263 ChimerSeq ChiTaRs ChiTaRs KCNQ4-SNHG1 KCNQ4 chr1 41258706 SNHG1 chr11 62619570 Exonic hg19 NA CN337008 Out-of-frame Inter-chr p34.2 q12.3 114264 ChimerSeq ChiTaRs ChiTaRs CD59-CD59 CD59 chr11 33727487 CD59 chr11 33731180 Exonic hg19 NA BE079888 Out-of-frame Intra-chr p13 p13 114265 ChimerSeq ChiTaRs ChiTaRs SP100-PAX7 SP100 chr2 231322740 PAX7 chr1 19050230 Exonic hg19 NA AA528778 Out-of-frame Inter-chr q37.1 Tumor suppressor gene Transcription factor p36.13 Oncogene Transcription factor 114266 ChimerSeq ChiTaRs ChiTaRs CTNNA2-CTNNA2 CTNNA2 chr2 80222663 CTNNA2 chr2 80221319 Exonic hg19 NA BI430528 Out-of-frame Intra-chr p12 Tumor suppressor gene p12 Tumor suppressor gene 114267 ChimerSeq ChiTaRs ChiTaRs PTGFRN-PTGFRN PTGFRN chr1 117529754 PTGFRN chr1 117491975 Exonic hg19 NA AW630858 Out-of-frame Intra-chr p13.1 p13.1 114268 ChimerSeq ChiTaRs ChiTaRs PLCH1-SERPINA5 PLCH1 chr3 155394105 SERPINA5 chr14 95047806 Exonic hg19 NA DB035358 5'UTR-5'UTR Inter-chr q25.31 q32.13 114269 ChimerSeq ChiTaRs ChiTaRs IDH3G-UBE2Q2P2 IDH3G chrX 153059836 UBE2Q2P2 chr15 82664400 Exonic hg19 NA BC008758 Out-of-frame Inter-chr q28 114270 ChimerSeq ChiTaRs ChiTaRs SORT1-CSRNP3 SORT1 chr1 109937575 CSRNP3 chr2 166408468 Exonic hg19 NA BX115008 Out-of-frame Inter-chr p13.3 q24.3 Transcription factor 114271 ChimerSeq ChiTaRs ChiTaRs DHX9-TMEM167A DHX9 chr1 182856295 TMEM167A chr5 82350133 Exonic hg19 NA BE161368 Out-of-frame Inter-chr q25.3 q14.2 114272 ChimerSeq ChiTaRs ChiTaRs HIPK1-UROD HIPK1 chr1 114516275 UROD chr1 45480619 Exonic hg19 NA BE772548 Out-of-frame Intra-chr p13.2 CMGC:DYRK p34.1 114273 ChimerSeq ChiTaRs ChiTaRs USP40-E2F5 USP40 chr2 234384445 E2F5 chr8 86125892 Exonic hg19 NA BG995978 Out-of-frame Inter-chr q37.1 q21.2 Transcription factor 114274 ChimerSeq ChiTaRs ChiTaRs MAN2A1-KCNH8 MAN2A1 chr5 109194129 KCNH8 chr3 19390373 Exonic hg19 NA AI474018 Out-of-frame Inter-chr q21.3 p24.3 114275 ChimerSeq ChiTaRs ChiTaRs TNRC18-GLS TNRC18 chr7 5437606 GLS chr2 191762157 Exonic hg19 NA BE179808 Out-of-frame Inter-chr p22.1 q32.2 Tumor suppressor gene 114276 ChimerSeq ChiTaRs ChiTaRs NAAA-NAAA NAAA chr4 76842158 NAAA chr4 76841093 Exonic hg19 NA BG164058 Out-of-frame Intra-chr q21.1 q21.1 114277 ChimerSeq ChiTaRs ChiTaRs CTR9-TAOK3 CTR9 chr11 10800389 TAOK3 chr12 118688334 Exonic hg19 NA AW903428 Out-of-frame Inter-chr p15.4 q24.23 114278 ChimerSeq ChiTaRs ChiTaRs UBE2E2-SRSF3 UBE2E2 chr3 23306906 SRSF3 chr6 36571114 Exonic hg19 NA BF173958 Out-of-frame Inter-chr p24.3 p21.31 114279 ChimerSeq ChiTaRs ChiTaRs VIT-VIT VIT chr2 36925607 VIT chr2 36925139 Exonic hg19 NA DW429948 Out-of-frame Intra-chr p22.2 p22.2 114280 ChimerSeq ChiTaRs ChiTaRs KDM1B-DENR KDM1B chr6 18205966 DENR chr12 123254301 Exonic hg19 NA BC012148 Out-of-frame Inter-chr p22.3 q24.31 114281 ChimerSeq ChiTaRs ChiTaRs ZDHHC5-ZDHHC5 ZDHHC5 chr11 57467414 ZDHHC5 chr11 57466282 Exonic hg19 NA BX119008 Out-of-frame Intra-chr q12.1 q12.1 114282 ChimerSeq ChiTaRs ChiTaRs MAGED1-MAGED1 MAGED1 chrX 51645450 MAGED1 chrX 51644812 Exonic hg19 NA BU675238 3'UTR-CDS Intra-chr p11.22 p11.22 114283 ChimerSeq ChiTaRs ChiTaRs SFXN5-SNAP23 SFXN5 chr2 73273013 SNAP23 chr15 42807604 Exonic hg19 NA BE843148 Out-of-frame Inter-chr p13.2 q15.1 114284 ChimerSeq ChiTaRs ChiTaRs ITGB5-ITGB5 ITGB5 chr3 124515401 ITGB5 chr3 124483240 Exonic hg19 NA BQ423878 Out-of-frame Intra-chr q21.2 q21.2 114285 ChimerSeq ChiTaRs ChiTaRs IFT57-IFT57 IFT57 chr3 107881758 IFT57 chr3 107881261 Exonic hg19 NA BF851038 Out-of-frame Intra-chr q13.13 q13.13 114286 ChimerSeq ChiTaRs ChiTaRs TUBB2A-SRSF4 TUBB2A chr6 3154126 SRSF4 chr1 29479908 Exonic hg19 NA AW956098 Out-of-frame Inter-chr p25.2 p35.3 114287 ChimerSeq ChiTaRs ChiTaRs ENO1-ENO1 ENO1 chr1 8921333 ENO1 chr1 8921166 Exonic hg19 NA BQ360948 Out-of-frame Intra-chr p36.23 p36.23 114288 ChimerSeq ChiTaRs ChiTaRs ZXDC-ZXDC ZXDC chr3 126178333 ZXDC chr3 126178305 Exonic hg19 NA BM680038 Out-of-frame Intra-chr q21.3 Transcription factor q21.3 Transcription factor 114289 ChimerSeq ChiTaRs ChiTaRs ACP2-MRVI1-AS1 ACP2 chr11 47270356 MRVI1-AS1 chr11 10590053 Exonic hg19 NA DA582448 Out-of-frame Intra-chr p11.2 p15.4 Tumor suppressor gene 114290 ChimerSeq ChiTaRs ChiTaRs PTPRC-PTPRC PTPRC chr1 198725149 PTPRC chr1 198608170 Exonic hg19 NA CD706868 Out-of-frame Intra-chr Tumor suppressor gene Tumor suppressor gene 114291 ChimerSeq ChiTaRs ChiTaRs LEPREL1-DHRS7B LEPREL1 chr3 189692396 DHRS7B chr17 21087057 Exonic hg19 NA BQ327778 Out-of-frame Inter-chr p11.2 114292 ChimerSeq ChiTaRs ChiTaRs RTN4-RTN4 RTN4 chr2 55205329 RTN4 chr2 55201048 Exonic hg19 NA AW994348 Out-of-frame Intra-chr p16.1 Tumor suppressor gene p16.1 Tumor suppressor gene 114293 ChimerSeq ChiTaRs ChiTaRs FYCO1-FYCO1 FYCO1 chr3 46007939 FYCO1 chr3 46008111 Exonic hg19 NA CT001468 Out-of-frame Intra-chr p21.31 p21.31 114294 ChimerSeq ChiTaRs ChiTaRs CRTAP-CRTAP CRTAP chr3 33185000 CRTAP chr3 33184753 Exonic hg19 NA BU620648 Out-of-frame Intra-chr p22.3 p22.3 114295 ChimerSeq ChiTaRs ChiTaRs DHX32-SEPT2 DHX32 chr10 127569303 2002_ 9_ 1_ chr2 242291399 Exonic hg19 NA BF815528 Out-of-frame Inter-chr q26.2 114296 ChimerSeq ChiTaRs ChiTaRs EPC1-RBM47 EPC1 chr10 32560817 RBM47 chr4 40425983 Exonic hg19 NA BE837418 Out-of-frame Inter-chr p11.22 p14 114297 ChimerSeq ChiTaRs ChiTaRs ACOX3-ACOX3 ACOX3 chr4 8407592 ACOX3 chr4 8411068 Exonic hg19 NA BF990548 Out-of-frame Intra-chr p16.1 p16.1 114298 ChimerSeq ChiTaRs ChiTaRs PEX11B-TPP1 PEX11B chr1 145523667 TPP1 chr11 6634593 Exonic hg19 NA BF925568 Out-of-frame Inter-chr q21.1 p15.4 114299 ChimerSeq ChiTaRs ChiTaRs CD74-CD74 CD74 chr5 149781367 CD74 chr5 149781371 Exonic hg19 NA H22438 Out-of-frame Intra-chr q33.1 q33.1 114300 ChimerSeq ChiTaRs ChiTaRs LRRC41-SERPINB6 LRRC41 chr1 46746936 SERPINB6 chr6 2948404 Exonic hg19 NA BC004948 Out-of-frame Inter-chr p33 p25.2 114301 ChimerSeq ChiTaRs ChiTaRs RNF19A-RNF19A RNF19A chr8 101269645 RNF19A chr8 101269590 Exonic hg19 NA AA665088 Out-of-frame Intra-chr q22.2 q22.2 114302 ChimerSeq ChiTaRs ChiTaRs CDHR3-DMP1 CDHR3 chr7 105553084 DMP1 chr4 88579954 Exonic hg19 NA CR745188 Out-of-frame Inter-chr q22.3 q22.1 Tumor suppressor gene 114303 ChimerSeq ChiTaRs ChiTaRs PRKCD-TBC1D8 PRKCD chr3 53219353 TBC1D8 chr2 101700156 Exonic hg19 NA BI021268 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q11.2 114304 ChimerSeq ChiTaRs ChiTaRs PRSS12-PRSS12 PRSS12 chr4 119201250 PRSS12 chr4 119201301 Exonic hg19 NA BU607278 Out-of-frame Intra-chr q26 q26 114305 ChimerSeq ChiTaRs ChiTaRs FAM126B-FAM126B FAM126B chr2 201850122 FAM126B chr2 201849058 Exonic hg19 NA H90018 Out-of-frame Intra-chr q33.1 q33.1 114306 ChimerSeq ChiTaRs ChiTaRs RNF7-BRI3BP RNF7 chr3 141464544 BRI3BP chr12 125500261 Exonic hg19 NA BE674978 Out-of-frame Inter-chr q23 q24.31 114307 ChimerSeq ChiTaRs ChiTaRs GPBP1L1-CACNA2D3 GPBP1L1 chr1 46093368 CACNA2D3 chr3 54599986 Exonic hg19 NA BG119228 Out-of-frame Inter-chr p34.1 Transcription factor p21.1 Tumor suppressor gene 114308 ChimerSeq ChiTaRs ChiTaRs SLC28A3-SLC28A3 SLC28A3 chr9 86901144 SLC28A3 chr9 86903483 Exonic hg19 NA AK074678 Out-of-frame Intra-chr q21.33 q21.33 114309 ChimerSeq ChiTaRs ChiTaRs C11orf58-PXN C11orf58 chr11 16760466 PXN chr12 120660379 Exonic hg19 NA DB239368 Out-of-frame Inter-chr p15.2 q24.23 114310 ChimerSeq ChiTaRs ChiTaRs GABRG2-SCD GABRG2 chr5 161582509 SCD chr10 102120746 Exonic hg19 NA AA985118 Out-of-frame Inter-chr q34 q24.31 114311 ChimerSeq ChiTaRs ChiTaRs RND3-LRCH3 RND3 chr2 151329003 LRCH3 chr3 197559427 Exonic hg19 NA AW804058 Out-of-frame Inter-chr q23.3 Tumor suppressor gene q29 114312 ChimerSeq ChiTaRs ChiTaRs GOLM1-GOLM1 GOLM1 chr9 88677507 GOLM1 chr9 88679045 Exonic hg19 NA CV346948 Out-of-frame Intra-chr q21.33 q21.33 114313 ChimerSeq ChiTaRs ChiTaRs MICB-TXNRD3 MICB chr6 2842536 TXNRD3 chr3 126352872 Exonic hg19 NA DA658778 Out-of-frame Inter-chr q21.3 114314 ChimerSeq ChiTaRs ChiTaRs NR3C1-NR3C1 NR3C1 chr5 142658459 NR3C1 chr5 142658431 Exonic hg19 NA AA649098 Out-of-frame Intra-chr q31.3 Transcription factor q31.3 Transcription factor 114315 ChimerSeq ChiTaRs ChiTaRs NT5DC1-WDR43 NT5DC1 chr6 116460090 WDR43 chr2 29117747 Exonic hg19 NA AW814828 Out-of-frame Inter-chr q22.1 p23.2 114316 ChimerSeq ChiTaRs ChiTaRs RBM33-RBM33 RBM33 chr7 155507543 RBM33 chr7 155507655 Exonic hg19 NA BF906258 Out-of-frame Intra-chr q36.3 q36.3 114317 ChimerSeq ChiTaRs ChiTaRs CANX-CANX CANX chr5 179156863 CANX chr5 179156530 Exonic hg19 NA AW583198 Out-of-frame Intra-chr 114318 ChimerSeq ChiTaRs ChiTaRs SBF2-SBF2 SBF2 chr11 9854145 SBF2 chr11 9859606 Exonic hg19 NA AK022478 Out-of-frame Intra-chr p15.4 p15.4 114319 ChimerSeq ChiTaRs ChiTaRs RERE-RERE RERE chr1 8413974 RERE chr1 8413722 Exonic hg19 NA BE829558 Out-of-frame Intra-chr p36.23 p36.23 114320 ChimerSeq ChiTaRs ChiTaRs MAP3K2-MAP3K2 MAP3K2 chr2 128063602 MAP3K2 chr2 128062230 Exonic hg19 NA AA830998 Out-of-frame Intra-chr q14.3 STE:STE11 q14.3 STE:STE11 114321 ChimerSeq ChiTaRs ChiTaRs AKAP12-MED12 AKAP12 chr6 151671064 MED12 chrX 70346111 Exonic hg19 NA BE005998 Out-of-frame Inter-chr q25.1 Tumor suppressor gene q13.1 Oncogene 114322 ChimerSeq ChiTaRs ChiTaRs CAPN8-CAPN8 CAPN8 chr1 223716377 CAPN8 chr1 223716378 Exonic hg19 NA CA945138 Out-of-frame Intra-chr q41 q41 114323 ChimerSeq ChiTaRs ChiTaRs ARPP21-ARPP21 ARPP21 chr3 35835941 ARPP21 chr3 35835897 Exonic hg19 NA BG389588 Out-of-frame Intra-chr p22.3 p22.3 114324 ChimerSeq ChiTaRs ChiTaRs ESYT2-ESYT2 ESYT2 chr7 158526080 ESYT2 chr7 158529904 Exonic hg19 NA W26908 Out-of-frame Intra-chr q36.3 q36.3 114325 ChimerSeq ChiTaRs ChiTaRs NUDCD3-DDIT4 NUDCD3 chr7 44507966 DDIT4 chr10 74034858 Exonic hg19 NA BQ773488 Out-of-frame Inter-chr p13 q22.1 114326 ChimerSeq ChiTaRs ChiTaRs ANKHD1-ANKHD1 ANKHD1 chr5 139889341 ANKHD1 chr5 139889325 Exonic hg19 NA BG403888 Out-of-frame Intra-chr q31.3 q31.3 114327 ChimerSeq ChiTaRs ChiTaRs MEST-CERS6 MEST chr7 130146155 CERS6 chr2 169374239 Exonic hg19 NA BF209028 Out-of-frame Inter-chr q32.2 q24.3 114328 ChimerSeq ChiTaRs ChiTaRs SLC39A7-IER3 SLC39A7 chr6 4402670 IER3 chr6 2043612 Exonic hg19 NA BF819978 Out-of-frame Intra-chr Tumor suppressor gene 114329 ChimerSeq ChiTaRs ChiTaRs NBPF11-NBPF11 NBPF11 chr1 147745215 NBPF11 chr1 147775593 Exonic hg19 NA AI246468 Out-of-frame Intra-chr q21.2 q21.2 114330 ChimerSeq ChiTaRs ChiTaRs BTN3A1-IQSEC1 BTN3A1 chr6 26405858 IQSEC1 chr3 12938719 Exonic hg19 NA AV724518 Out-of-frame Inter-chr p22.2 p25.2 114331 ChimerSeq ChiTaRs ChiTaRs AP2A2-ACVRL1 AP2A2 chr11 1008128 ACVRL1 chr12 52312792 Exonic hg19 NA AW956968 Out-of-frame Inter-chr p15.5 q13.13 Oncogene 114332 ChimerSeq ChiTaRs ChiTaRs CALD1-CALD1 CALD1 chr7 134653658 CALD1 chr7 134653664 Exonic hg19 NA AW067908 Out-of-frame Intra-chr q33 q33 114333 ChimerSeq ChiTaRs ChiTaRs FSTL5-PLEKHA7 FSTL5 chr4 163084890 PLEKHA7 chr11 16996174 Exonic hg19 NA BC073978 Out-of-frame Inter-chr q32.2 p15.1 114334 ChimerSeq ChiTaRs ChiTaRs ALG6-SMURF1 ALG6 chr1 63902872 SMURF1 chr7 98696834 Exonic hg19 NA BI493648 Out-of-frame Inter-chr p31.3 114335 ChimerSeq ChiTaRs ChiTaRs STK17A-STK17A STK17A chr7 43648591 STK17A chr7 43648570 Exonic hg19 NA BM969318 Out-of-frame Intra-chr p13 p13 114336 ChimerSeq ChiTaRs ChiTaRs LY6E-ZNF511 LY6E chr8 144103826 ZNF511 chr10 135163622 Exonic hg19 NA CB164138 Out-of-frame Inter-chr q26.3 Transcription factor 114337 ChimerSeq ChiTaRs ChiTaRs PKN2-TXK PKN2 chr1 89281547 TXK chr4 48134102 Exonic hg19 NA BX092188 Out-of-frame Inter-chr p22.2 AGC:PKN p12 TK:Tec 114338 ChimerSeq ChiTaRs ChiTaRs MLLT10-LRCH3 MLLT10 chr10 22021972 LRCH3 chr3 197582583 Exonic hg19 NA BG999468 Out-of-frame Inter-chr p12.31 Oncogene q29 114339 ChimerSeq ChiTaRs ChiTaRs FST-FST FST chr5 52778792 FST chr5 52778800 Exonic hg19 NA AW068788 Out-of-frame Intra-chr q11.2 q11.2 114340 ChimerSeq ChiTaRs ChiTaRs TSNARE1-ACTB TSNARE1 chr8 143454439 ACTB chr7 5567479 Exonic hg19 NA AW970008 Out-of-frame Inter-chr q24.3 p22.1 114341 ChimerSeq ChiTaRs ChiTaRs VCP-HNRNPA2B1 VCP chr9 35067918 HNRNPA2B1 chr7 26231928 Exonic hg19 NA BF082148 Out-of-frame Inter-chr p13.3 p15.2 114342 ChimerSeq ChiTaRs ChiTaRs S100A16-S100A16 S100A16 chr1 153579479 S100A16 chr1 153579366 Exonic hg19 NA BE894298 3'UTR-CDS Intra-chr q21.3 q21.3 114343 ChimerSeq ChiTaRs ChiTaRs CASP2-CASP2 CASP2 chr7 142997326 CASP2 chr7 142997328 Exonic hg19 NA AW993608 Out-of-frame Intra-chr q34 Tumor suppressor gene q34 Tumor suppressor gene 114344 ChimerSeq ChiTaRs ChiTaRs SERINC2-SERINC2 SERINC2 chr1 31906033 SERINC2 chr1 31906970 Exonic hg19 NA AA481928 Out-of-frame Intra-chr p35.2 p35.2 114345 ChimerSeq ChiTaRs ChiTaRs C9orf3-LSS C9orf3 chr9 97849148 LSS chr21 47609069 Exonic hg19 NA BI055158 Out-of-frame Inter-chr q22.32 q22.3 114346 ChimerSeq ChiTaRs ChiTaRs EXOC4-UBR2 EXOC4 chr7 133186937 UBR2 chr6 42580839 Exonic hg19 NA AK001118 Out-of-frame Inter-chr q33 p21.1 114347 ChimerSeq ChiTaRs ChiTaRs SCN11A-LOC389831 SCN11A chr3 38941384 LOC389831 chr7 43627 Exonic hg19 NA C14288 Out-of-frame Inter-chr p22.2 114348 ChimerSeq ChiTaRs ChiTaRs RANBP2-MAP2 RANBP2 chr2 109345504 MAP2 chr2 210596571 Exonic hg19 NA AA682348 Out-of-frame Intra-chr q13 q34 114349 ChimerSeq ChiTaRs ChiTaRs SGK1-NUFIP2 SGK1 chr6 134491373 NUFIP2 chr17 27583753 Exonic hg19 NA BE178199 Out-of-frame Inter-chr q23.2 AGC:SGK Oncogene q11.2 114350 ChimerSeq ChiTaRs ChiTaRs PSD4-ARHGAP6 PSD4 chr2 113935286 ARHGAP6 chrX 11520936 Exonic hg19 NA CV355109 Out-of-frame Inter-chr q14.1 p22.2 114351 ChimerSeq ChiTaRs ChiTaRs MIR548F1-MIR548F1 MIR548F1 chr1 186373161 MIR548F1 chr1 186373562 Exonic hg19 NA AA829939 Out-of-frame Intra-chr q21.1 q21.1 114352 ChimerSeq ChiTaRs ChiTaRs GUK1-SMARCC1 GUK1 chr1 228336555 SMARCC1 chr3 47632258 Exonic hg19 NA BI051269 Out-of-frame Inter-chr q42.13 p21.31 Tumor suppressor gene 114353 ChimerSeq ChiTaRs ChiTaRs PDIA4-RPL18 PDIA4 chr7 148716187 RPL18 chr19 49119137 Exonic hg19 NA BE881549 Out-of-frame Inter-chr q36.1 q13.33 114354 ChimerSeq ChiTaRs ChiTaRs SAMD11-FADS2 SAMD11 chr1 867338 FADS2 chr11 61634353 Exonic hg19 NA CN283539 Out-of-frame Inter-chr p36.33 q12.2 114355 ChimerSeq ChiTaRs ChiTaRs BCAR3-RAD23B BCAR3 chr1 94054433 RAD23B chr9 110087160 Exonic hg19 NA BE814279 Out-of-frame Inter-chr p22.1 q31.2 Tumor suppressor gene 114356 ChimerSeq ChiTaRs ChiTaRs DPP10-RAB10 DPP10 chr2 115276901 RAB10 chr2 26340621 Exonic hg19 NA AW904489 Out-of-frame Intra-chr q14.1 p23.3 114357 ChimerSeq ChiTaRs ChiTaRs IFT57-IFT57 IFT57 chr3 107885808 IFT57 chr3 107881365 Exonic hg19 NA R64729 Out-of-frame Intra-chr q13.13 q13.13 114358 ChimerSeq ChiTaRs ChiTaRs ERRFI1-ERRFI1 ERRFI1 chr1 8076964 ERRFI1 chr1 8077981 Exonic hg19 NA AW956039 Out-of-frame Intra-chr p36.23 Tumor suppressor gene p36.23 Tumor suppressor gene 114359 ChimerSeq ChiTaRs ChiTaRs SOX2-OT-SNX29 SOX2-OT chr3 181421817 SNX29 chr16 12667731 Exonic hg19 NA CD673869 Out-of-frame Inter-chr q26.33 Oncogene Transcription factor p13.13 114360 ChimerSeq ChiTaRs ChiTaRs PRKDC-SVIL PRKDC chr8 48859603 SVIL chr10 29839913 Exonic hg19 NA BF821929 Out-of-frame Inter-chr q11.21 Oncogene p11.23 114361 ChimerSeq ChiTaRs ChiTaRs LOC401232-ANK2 LOC401232 chr6 3015940 ANK2 chr4 114066847 Exonic hg19 NA AB209779 Out-of-frame Inter-chr q25 114362 ChimerSeq ChiTaRs ChiTaRs SIL1-ALKBH1 SIL1 chr5 138442723 ALKBH1 chr14 78144525 Exonic hg19 NA AW813119 Out-of-frame Inter-chr q31.2 q24.3 114363 ChimerSeq ChiTaRs ChiTaRs GSN-GSN GSN chr9 124088921 GSN chr9 124083617 Exonic hg19 NA BE939479 Out-of-frame Intra-chr q33.2 Tumor suppressor gene q33.2 Tumor suppressor gene 114364 ChimerSeq ChiTaRs ChiTaRs PDE4B-PDE4B PDE4B chr1 66839041 PDE4B chr1 66838958 Exonic hg19 NA AA226609 Out-of-frame Intra-chr p31.3 p31.3 114365 ChimerSeq ChiTaRs ChiTaRs CHCHD3-CHCHD3 CHCHD3 chr7 132604666 CHCHD3 chr7 132604660 Exonic hg19 NA AW816289 Out-of-frame Intra-chr q33 Transcription factor q33 Transcription factor 114366 ChimerSeq ChiTaRs ChiTaRs HIATL1-SF3B1 HIATL1 chr9 97222465 SF3B1 chr2 198256704 Exonic hg19 NA AF130099 Out-of-frame Inter-chr q33.1 Oncogene 114367 ChimerSeq ChiTaRs ChiTaRs CNNM4-LOC100507412 CNNM4 chr2 97490927 LOC100507412 chr? 116138 Exonic hg19 NA BF369889 Out-of-frame Inter-chr q11.2 114368 ChimerSeq ChiTaRs ChiTaRs ENG-FAM222B ENG chr9 130605146 FAM222B chr17 27164981 Exonic hg19 NA BG506729 Out-of-frame Inter-chr q34.11 q11.2 114369 ChimerSeq ChiTaRs ChiTaRs RAPGEF5-TMEM14B RAPGEF5 chr7 22211583 TMEM14B chr6 10848782 Exonic hg19 NA BG483209 Out-of-frame Inter-chr p15.3 p24.2 114370 ChimerSeq ChiTaRs ChiTaRs INPP5D-C7orf73 INPP5D chr2 233977114 C7orf73 chr7 135359977 Exonic hg19 NA AA019799 Out-of-frame Inter-chr q33 114371 ChimerSeq ChiTaRs ChiTaRs PARP8-PARP8 PARP8 chr5 50055563 PARP8 chr5 50059060 Exonic hg19 NA BF910519 Out-of-frame Intra-chr q11.1 q11.1 114372 ChimerSeq ChiTaRs ChiTaRs STAMBPL1-FBXO21 STAMBPL1 chr10 90673156 FBXO21 chr12 117614314 Exonic hg19 NA BF805839 Out-of-frame Inter-chr q23.31 q24.22 114373 ChimerSeq ChiTaRs ChiTaRs ZXDC-ZXDC ZXDC chr3 126172992 ZXDC chr3 126172279 Exonic hg19 NA AW205249 Out-of-frame Intra-chr q21.3 Transcription factor q21.3 Transcription factor 114374 ChimerSeq ChiTaRs ChiTaRs EIF4E3-EIF4E3 EIF4E3 chr3 71739186 EIF4E3 chr3 71748802 Exonic hg19 NA BF955589 Out-of-frame Intra-chr p13 p13 114375 ChimerSeq ChiTaRs ChiTaRs JPX-SERPINB1 JPX chrX 73207462 SERPINB1 chr6 2836214 Exonic hg19 NA AW578859 Out-of-frame Inter-chr q13.2 p25.2 114376 ChimerSeq ChiTaRs ChiTaRs TMEM51-TMEM51 TMEM51 chr1 15515514 TMEM51 chr1 15515482 Exonic hg19 NA CV427159 Out-of-frame Intra-chr p36.21 p36.21 114377 ChimerSeq ChiTaRs ChiTaRs RNU5F-1-RCAN2 RNU5F-1 chr1 220231251 RCAN2 chr6 46190016 Exonic hg19 NA CK902589 Out-of-frame Inter-chr p34.1 p12.3 114378 ChimerSeq ChiTaRs ChiTaRs CDK13-CDK13 CDK13 chr7 40107446 CDK13 chr7 40104656 Exonic hg19 NA BX491859 Out-of-frame Intra-chr p14.1 p14.1 114379 ChimerSeq ChiTaRs ChiTaRs KIAA0907-KIAA0907 KIAA0907 chr1 155895446 KIAA0907 chr1 155895900 Exonic hg19 NA AW857709 Out-of-frame Intra-chr q22 q22 114380 ChimerSeq ChiTaRs ChiTaRs PIWIL2-VPS54 PIWIL2 chr8 22177254 VPS54 chr2 64224684 Exonic hg19 NA BX537789 Out-of-frame Inter-chr p21.3 Tumor suppressor gene p14 114381 ChimerSeq ChiTaRs ChiTaRs WDR12-VPS52 WDR12 chr2 203776653 VPS52 chr6 4717989 Exonic hg19 NA BM827819 Out-of-frame Inter-chr q33.2 114382 ChimerSeq ChiTaRs ChiTaRs NCL-NCL NCL chr2 232324968 NCL chr2 232323715 Exonic hg19 NA AW581869 Out-of-frame Intra-chr q37.1 q37.1 114383 ChimerSeq ChiTaRs ChiTaRs IDS-AFMID IDS chrX 148560595 AFMID chr17 76202062 Exonic hg19 NA BX509939 Out-of-frame Inter-chr q28 q25.3 114384 ChimerSeq ChiTaRs ChiTaRs ASAP2-ASAP2 ASAP2 chr2 9495943 ASAP2 chr2 9495815 Exonic hg19 NA BE073939 Out-of-frame Intra-chr p25.1 p25.1 114385 ChimerSeq ChiTaRs ChiTaRs HSF1-BAIAP2L1 HSF1 chr8 145535690 BAIAP2L1 chr7 98015039 Exonic hg19 NA BC094829 Out-of-frame Inter-chr q24.3 Transcription factor q22.1 114386 ChimerSeq ChiTaRs ChiTaRs ANK2-PCDHB14 ANK2 chr4 113967140 PCDHB14 chr5 140605235 Exonic hg19 NA BF949569 Out-of-frame Inter-chr q25 q31.3 114387 ChimerSeq ChiTaRs ChiTaRs HMP19-RNF220 HMP19 chr5 173505316 RNF220 chr1 45115343 Exonic hg19 NA CB049139 Out-of-frame Inter-chr q35.2 p34.1 114388 ChimerSeq ChiTaRs ChiTaRs ARHGAP31-CD320 ARHGAP31 chr3 119046149 CD320 chr19 8355874 Exonic hg19 NA BQ881039 Out-of-frame Inter-chr q13.32 p13.2 114389 ChimerSeq ChiTaRs ChiTaRs PXDN-NEAT1 PXDN chr2 1637759 NEAT1 chr11 65191502 Exonic hg19 NA BI055149 Out-of-frame Inter-chr p25.3 q13.1 114390 ChimerSeq ChiTaRs ChiTaRs FAM178B-SRP68 FAM178B chr2 97635091 SRP68 chr17 74060182 Exonic hg19 NA DA276739 Out-of-frame Inter-chr q11.2 q25.1 114391 ChimerSeq ChiTaRs ChiTaRs TAF2-TAF2 TAF2 chr8 120744352 TAF2 chr8 120743869 Exonic hg19 NA BM992479 Out-of-frame Intra-chr q24.12 q24.12 114392 ChimerSeq ChiTaRs ChiTaRs TRIM4-TRIM4 TRIM4 chr7 99490174 TRIM4 chr7 99489621 Exonic hg19 NA CD694949 Out-of-frame Intra-chr q22.1 q22.1 114393 ChimerSeq ChiTaRs ChiTaRs PCCB-PCCB PCCB chr3 136051829 PCCB chr3 136051900 Exonic hg19 NA BM874469 Out-of-frame Intra-chr q22.3 q22.3 114394 ChimerSeq ChiTaRs ChiTaRs PLEC-PRPF6 PLEC chr8 145039163 PRPF6 chr20 62664191 Exonic hg19 NA BF762059 Out-of-frame Inter-chr q24.3 q13.33 114395 ChimerSeq ChiTaRs ChiTaRs C9orf72-C9orf72 C9orf72 chr9 27548326 C9orf72 chr9 27548366 Exonic hg19 NA BE706419 Out-of-frame Intra-chr p21.2 p21.2 114396 ChimerSeq ChiTaRs ChiTaRs PPIL4-PPIL4 PPIL4 chr6 149842304 PPIL4 chr6 149826507 Exonic hg19 NA BE887609 Out-of-frame Intra-chr q25.1 q25.1 114397 ChimerSeq ChiTaRs ChiTaRs ERBB4-KCNAB1 ERBB4 chr2 213122236 KCNAB1 chr3 156192426 Exonic hg19 NA BE669609 Out-of-frame Inter-chr q34 Oncogene Tumor suppressor gene q25.31 114398 ChimerSeq ChiTaRs ChiTaRs LOC253039-MARK3 LOC253039 chr9 123615408 MARK3 chr14 103963349 Exonic hg19 NA BF083279 Out-of-frame Inter-chr q32.32 CAMK:CAMKL 114399 ChimerSeq ChiTaRs ChiTaRs ADAMTSL4-ADAMTSL4 ADAMTSL4 chr1 150522740 ADAMTSL4 chr1 150522179 Exonic hg19 NA EB385509 Out-of-frame Intra-chr q21.2 q21.2 114400 ChimerSeq ChiTaRs ChiTaRs GTDC1-MMACHC GTDC1 chr2 144885151 MMACHC chr1 45976724 Exonic hg19 NA AK129949 Out-of-frame Inter-chr q22.3 p34.1 114401 ChimerSeq ChiTaRs ChiTaRs KPNA6-KPNA6 KPNA6 chr1 32639872 KPNA6 chr1 32639107 Exonic hg19 NA DA569109 Out-of-frame Intra-chr p35.2 p35.2 114402 ChimerSeq ChiTaRs ChiTaRs ASAP1-PSMD3 ASAP1 chr8 131124568 PSMD3 chr17 38153778 Exonic hg19 NA BM824189 In-Frame Inter-chr q24.22 q21.1 114403 ChimerSeq ChiTaRs ChiTaRs SERPINI2-MED13L SERPINI2 chr3 167173955 MED13L chr12 116558166 Exonic hg19 NA CK824479 Out-of-frame Inter-chr q26.1 Tumor suppressor gene q24.21 114404 ChimerSeq ChiTaRs ChiTaRs PRKACB-RYR3 PRKACB chr1 84633274 RYR3 chr15 34021153 Exonic hg19 NA BF944829 Out-of-frame Inter-chr p31.1 q13.3 114405 ChimerSeq ChiTaRs ChiTaRs PERP-METAP1 PERP chr6 138412275 METAP1 chr4 99983432 Exonic hg19 NA AW352239 Out-of-frame Inter-chr q23.3 q23 114406 ChimerSeq ChiTaRs ChiTaRs C1orf112-NEGR1 C1orf112 chr1 169818828 NEGR1 chr1 72666225 Exonic hg19 NA AI140909 Out-of-frame Intra-chr q24.2 p31.1 114407 ChimerSeq ChiTaRs ChiTaRs SCLY-CHURC1-FNTB SCLY chr2 239008053 CHURC1-FNTB chr14 65418105 Exonic hg19 NA AA775419 Out-of-frame Inter-chr q37.3 q23.3 114408 ChimerSeq ChiTaRs ChiTaRs EIF1AY-EIF1AY EIF1AY chrY 22754512 EIF1AY chrY 22751415 Exonic hg19 NA CB241509 Out-of-frame Intra-chr q11.223 q11.223 114409 ChimerSeq ChiTaRs ChiTaRs FAM50A-FAM50A FAM50A chrX 153678422 FAM50A chrX 153672632 Exonic hg19 NA BQ223609 Out-of-frame Intra-chr q28 q28 114410 ChimerSeq ChiTaRs ChiTaRs OCIAD1-MTOR OCIAD1 chr4 48850463 MTOR chr1 11193152 Exonic hg19 NA DB084769 Out-of-frame Inter-chr p11 p36.22 Oncogene 114411 ChimerSeq ChiTaRs ChiTaRs PORCN-PORCN PORCN chrX 48368199 PORCN chrX 48369732 Exonic hg19 NA L08239 Out-of-frame Intra-chr p11.23 p11.23 114412 ChimerSeq ChiTaRs ChiTaRs EIF4G2-FOXK2 EIF4G2 chr11 10823323 FOXK2 chr17 80525944 Exonic hg19 NA BE621359 Out-of-frame Inter-chr p15.4 q25.3 Transcription factor 114413 ChimerSeq ChiTaRs ChiTaRs RREB1-KIFAP3 RREB1 chr6 7252213 KIFAP3 chr1 170003513 Exonic hg19 NA BU679959 3'UTR-CDS Inter-chr p24.3 Transcription factor q24.2 114414 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-INS-IGF2 INS-IGF2 chr11 2150697 INS-IGF2 chr11 2150351 Exonic hg19 NA BI050729 Out-of-frame Intra-chr p15.5 p15.5 Oncogene 114415 ChimerSeq ChiTaRs ChiTaRs IFI44L-IFI44L IFI44L chr1 79107492 IFI44L chr1 79106764 Exonic hg19 NA BE815069 Out-of-frame Intra-chr p31.1 p31.1 114416 ChimerSeq ChiTaRs ChiTaRs EFNA1-BRD2 EFNA1 chr1 155107335 BRD2 chr6 4429388 Exonic hg19 NA AI873279 Out-of-frame Inter-chr q22 Atypical:BRD 114417 ChimerSeq ChiTaRs ChiTaRs ZZZ3-ZZZ3 ZZZ3 chr1 78084215 ZZZ3 chr1 78083948 Exonic hg19 NA AA482859 Out-of-frame Intra-chr p31.1 Transcription factor p31.1 Transcription factor 114418 ChimerSeq ChiTaRs ChiTaRs PALLD-SRSF4 PALLD chr4 169567986 SRSF4 chr1 29506065 Exonic hg19 NA BQ313599 Out-of-frame Inter-chr q32.3 p35.3 114419 ChimerSeq ChiTaRs ChiTaRs TAB2-TAB2 TAB2 chr6 149705875 TAB2 chr6 149705880 Exonic hg19 NA AW855039 Out-of-frame Intra-chr q25.1 q25.1 114420 ChimerSeq ChiTaRs ChiTaRs SNX27-LOC100507443 SNX27 chr1 151671542 LOC100507443 chr2 208985840 Exonic hg19 NA BE177749 Out-of-frame Inter-chr q21.3 114421 ChimerSeq ChiTaRs ChiTaRs RAC1-RAP1GAP2 RAC1 chr7 6443553 RAP1GAP2 chr17 2898687 Exonic hg19 NA AA149799 Out-of-frame Inter-chr p22.1 Oncogene p13.3 114422 ChimerSeq ChiTaRs ChiTaRs TLK1-TLK1 TLK1 chr2 172016840 TLK1 chr2 171913056 Exonic hg19 NA AA313889 Out-of-frame Intra-chr q31.1 Other:TLK q31.1 Other:TLK 114423 ChimerSeq ChiTaRs ChiTaRs YWHAZ-YWHAZ YWHAZ chr8 101942953 YWHAZ chr8 101942158 Exonic hg19 NA BF910449 Out-of-frame Intra-chr q22.3 q22.3 114424 ChimerSeq ChiTaRs ChiTaRs C6orf62-C6orf62 C6orf62 chr6 24706200 C6orf62 chr6 24706197 Exonic hg19 NA AA657779 Out-of-frame Intra-chr p22.3 p22.3 114425 ChimerSeq ChiTaRs ChiTaRs IGFBP5-IGFBP5 IGFBP5 chr2 217541426 IGFBP5 chr2 217540509 Exonic hg19 NA CA427209 Out-of-frame Intra-chr q35 Tumor suppressor gene q35 Tumor suppressor gene 114426 ChimerSeq ChiTaRs ChiTaRs SLC16A1-SLC16A1 SLC16A1 chr1 113456371 SLC16A1 chr1 113456372 Exonic hg19 NA BI335919 Out-of-frame Intra-chr 114427 ChimerSeq ChiTaRs ChiTaRs AGBL2-C6orf10 AGBL2 chr11 47736750 C6orf10 chr6 3608270 Exonic hg19 NA BX113229 Out-of-frame Inter-chr p11.2 114428 ChimerSeq ChiTaRs ChiTaRs UBR5-ALKBH5 UBR5 chr8 103265889 ALKBH5 chr17 18101740 Exonic hg19 NA BQ184759 Out-of-frame Inter-chr q22.3 Oncogene p11.2 114429 ChimerSeq ChiTaRs ChiTaRs PIM1-GBF1 PIM1 chr6 37143202 GBF1 chr10 104116555 Exonic hg19 NA AI536729 Out-of-frame Inter-chr p21.2 CAMK:PIM Oncogene q24.32 114430 ChimerSeq ChiTaRs ChiTaRs WDFY3-WDFY3 WDFY3 chr4 85843456 WDFY3 chr4 85844794 Exonic hg19 NA AA427969 Out-of-frame Intra-chr q21.23 q21.23 114431 ChimerSeq ChiTaRs ChiTaRs UBE3C-BAG1 UBE3C chr7 156968887 BAG1 chr9 33253446 Exonic hg19 NA BE884609 Out-of-frame Inter-chr q36.3 p13.3 114432 ChimerSeq ChiTaRs ChiTaRs CELF1-CELF1 CELF1 chr11 47488301 CELF1 chr11 47488306 Exonic hg19 NA CB250469 Out-of-frame Intra-chr p11.2 p11.2 114433 ChimerSeq ChiTaRs ChiTaRs ENO1-CCT7 ENO1 chr1 8923343 CCT7 chr2 73461450 Exonic hg19 NA BQ646179 Out-of-frame Inter-chr p36.23 p13.2 114434 ChimerSeq ChiTaRs ChiTaRs PTK2-CLTC PTK2 chr8 141669789 CLTC chr17 57709892 Exonic hg19 NA AW378979 Out-of-frame Inter-chr q24.3 q23.1 114435 ChimerSeq ChiTaRs ChiTaRs DSP-DSP DSP chr6 7585704 DSP chr6 7585682 Exonic hg19 NA AA847709 Out-of-frame Intra-chr p24.3 Tumor suppressor gene p24.3 Tumor suppressor gene 114436 ChimerSeq ChiTaRs ChiTaRs RERE-RERE RERE chr1 8840011 RERE chr1 8834680 Exonic hg19 NA AW235269 Out-of-frame Intra-chr p36.23 p36.23 114437 ChimerSeq ChiTaRs ChiTaRs H19-VCPIP1 H19 chr11 2019072 VCPIP1 chr8 67546734 Exonic hg19 NA DA444649 Out-of-frame Inter-chr p15.5 Tumor suppressor gene q13.1 114438 ChimerSeq ChiTaRs ChiTaRs PEG10-CLU PEG10 chr7 94298679 CLU chr8 27466511 Exonic hg19 NA DR978309 Out-of-frame Inter-chr q21.3 p21.1 Tumor suppressor gene 114439 ChimerSeq ChiTaRs ChiTaRs TRIM26-PSMD1 TRIM26 chr6 1445492 PSMD1 chr2 232035509 Exonic hg19 NA BE769099 Out-of-frame Inter-chr q37.1 114440 ChimerSeq ChiTaRs ChiTaRs HLA-F-MEF2C HLA-F chr6 1293073 MEF2C chr5 88100417 Exonic hg19 NA AW801119 Out-of-frame Inter-chr q14.3 114441 ChimerSeq ChiTaRs ChiTaRs NSD1-TBC1D1 NSD1 chr5 176638730 TBC1D1 chr4 38001672 Exonic hg19 NA BF369639 Out-of-frame Inter-chr q35.3 Oncogene p14 114442 ChimerSeq ChiTaRs ChiTaRs GTPBP2-GTPBP2 GTPBP2 chr6 43592752 GTPBP2 chr6 43588769 Exonic hg19 NA BQ327509 Out-of-frame Intra-chr p21.1 p21.1 114443 ChimerSeq ChiTaRs ChiTaRs SDF4-SDF4 SDF4 chr1 1152563 SDF4 chr1 1152403 Exonic hg19 NA BF515249 Out-of-frame Intra-chr p36.33 p36.33 114444 ChimerSeq ChiTaRs ChiTaRs MEPCE-MEPCE MEPCE chr7 100027728 MEPCE chr7 100027606 Exonic hg19 NA BQ224979 Out-of-frame Intra-chr q22.1 q22.1 114445 ChimerSeq ChiTaRs ChiTaRs SORCS2-SPSB1 SORCS2 chr4 7705236 SPSB1 chr1 9365134 Exonic hg19 NA BF854699 Out-of-frame Inter-chr p16.1 p36.22 114446 ChimerSeq ChiTaRs ChiTaRs CTTNBP2NL-CTTNBP2NL CTTNBP2NL chr1 113002144 CTTNBP2NL chr1 113002100 Exonic hg19 NA D82289 Out-of-frame Intra-chr p13.2 p13.2 114447 ChimerSeq ChiTaRs ChiTaRs PTP4A1-PTP4A1 PTP4A1 chr6 64290357 PTP4A1 chr6 64290360 Exonic hg19 NA BE069169 Out-of-frame Intra-chr q12 q12 114448 ChimerSeq ChiTaRs ChiTaRs ARHGAP21-ARHGAP21 ARHGAP21 chr10 24873945 ARHGAP21 chr10 24917943 Exonic hg19 NA AK074589 Out-of-frame Intra-chr p12.1 p12.1 114449 ChimerSeq ChiTaRs ChiTaRs PUM1-RALGPS1 PUM1 chr1 31404867 RALGPS1 chr9 129720251 Exonic hg19 NA BE177869 Out-of-frame Inter-chr p35.2 q33.3 114450 ChimerSeq ChiTaRs ChiTaRs CCAR1-BAZ1A CCAR1 chr10 70520866 BAZ1A chr14 35315043 Exonic hg19 NA AI914719 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q13.2 114451 ChimerSeq ChiTaRs ChiTaRs CLTB-CLTB CLTB chr5 175843530 CLTB chr5 175819503 Exonic hg19 NA M20469 Out-of-frame Intra-chr q35.2 q35.2 114452 ChimerSeq ChiTaRs ChiTaRs MUC4-MAGEF1 MUC4 chr3 195515492 MAGEF1 chr3 184428156 Exonic hg19 NA BQ689139 Out-of-frame Intra-chr q27.1 114453 ChimerSeq ChiTaRs ChiTaRs TBL1X-TBL1X TBL1X chrX 9686887 TBL1X chrX 9686945 Exonic hg19 NA AI129599 Out-of-frame Intra-chr p22.31 p22.31 114454 ChimerSeq ChiTaRs ChiTaRs CNN3-CNN3 CNN3 chr1 95367312 CNN3 chr1 95364933 Exonic hg19 NA AA640449 Out-of-frame Intra-chr p21.3 p21.3 114455 ChimerSeq ChiTaRs ChiTaRs CDK19-CDK19 CDK19 chr6 110975934 CDK19 chr6 110972244 Exonic hg19 NA CD654079 Out-of-frame Intra-chr q21 q21 114456 ChimerSeq ChiTaRs ChiTaRs NLGN3-TNKS1BP1 NLGN3 chrX 70390675 TNKS1BP1 chr11 57076478 Exonic hg19 NA BF950679 Out-of-frame Inter-chr q13.1 q12.1 114457 ChimerSeq ChiTaRs ChiTaRs DAPK1-NRBP1 DAPK1 chr9 90140490 NRBP1 chr2 27659914 Exonic hg19 NA W79389 Out-of-frame Inter-chr q21.33 CAMK:DAPK Tumor suppressor gene p23.3 Other:NRBP Tumor suppressor gene 114458 ChimerSeq ChiTaRs ChiTaRs UBE3C-UBE3C UBE3C chr7 156960649 UBE3C chr7 156959880 Exonic hg19 NA AA325349 Out-of-frame Intra-chr q36.3 q36.3 114459 ChimerSeq ChiTaRs ChiTaRs AIMP2-EIF2AK1 AIMP2 chr7 6063580 EIF2AK1 chr7 6063615 Exonic hg19 NA CB243839 Out-of-frame Intra-chr p22.1 Tumor suppressor gene p22.1 114460 ChimerSeq ChiTaRs ChiTaRs SNX18-SNX18 SNX18 chr5 53841215 SNX18 chr5 53841141 Exonic hg19 NA AA736809 Out-of-frame Intra-chr q11.2 q11.2 114461 ChimerSeq ChiTaRs ChiTaRs LIPA-ELK4 LIPA chr10 90974094 ELK4 chr1 205583571 Exonic hg19 NA AW370429 Out-of-frame Inter-chr q23.31 q32.1 Transcription factor 114462 ChimerSeq ChiTaRs ChiTaRs ARPC2-ARPC2 ARPC2 chr2 219114627 ARPC2 chr2 219118619 Exonic hg19 NA CB321859 Out-of-frame Intra-chr q35 q35 114463 ChimerSeq ChiTaRs ChiTaRs RAB3GAP1-RAB3GAP1 RAB3GAP1 chr2 135838669 RAB3GAP1 chr2 135845365 Exonic hg19 NA BF358939 Out-of-frame Intra-chr q21.3 q21.3 114464 ChimerSeq ChiTaRs ChiTaRs APOA2-PNP APOA2 chr1 161193418 PNP chr14 20944930 Exonic hg19 NA AI064779 5'UTR-3'UTR Inter-chr q23.3 q11.2 Oncogene 114465 ChimerSeq ChiTaRs ChiTaRs PRUNE-PRUNE PRUNE chr1 151008189 PRUNE chr1 151007771 Exonic hg19 NA BF984499 3'UTR-CDS Intra-chr 114466 ChimerSeq ChiTaRs ChiTaRs CAMSAP1-SDHAF2 CAMSAP1 chr9 138755944 SDHAF2 chr11 61213433 Exonic hg19 NA T04949 Out-of-frame Inter-chr q34.3 q12.2 114467 ChimerSeq ChiTaRs ChiTaRs SEC61A1-SEC61A1 SEC61A1 chr3 127789152 SEC61A1 chr3 127789165 Exonic hg19 NA AW939919 Out-of-frame Intra-chr q21.3 q21.3 114468 ChimerSeq ChiTaRs ChiTaRs HGSNAT-HGSNAT HGSNAT chr8 43002696 HGSNAT chr8 42995695 Exonic hg19 NA CN256929 Out-of-frame Intra-chr p11.21 p11.21 114469 ChimerSeq ChiTaRs ChiTaRs PFKFB3-ASRGL1 PFKFB3 chr10 6262523 ASRGL1 chr11 62123796 Exonic hg19 NA AK025969 Out-of-frame Inter-chr p15.1 q12.3 114470 ChimerSeq ChiTaRs ChiTaRs RBM34-GGPS1 RBM34 chr1 235324565 GGPS1 chr1 235498557 Exonic hg19 NA DB026779 Out-of-frame Intra-chr q42.3 q42.3 114471 ChimerSeq ChiTaRs ChiTaRs ANKRD28-ANKRD28 ANKRD28 chr3 15726917 ANKRD28 chr3 15718987 Exonic hg19 NA BE831069 Out-of-frame Intra-chr p25.1 p25.1 114472 ChimerSeq ChiTaRs ChiTaRs NAV1-TGOLN2 NAV1 chr1 201789131 TGOLN2 chr2 85545606 Exonic hg19 NA AW366559 Out-of-frame Inter-chr q32.1 p11.2 114473 ChimerSeq ChiTaRs ChiTaRs ROCK2-CC2D2A ROCK2 chr2 11322394 CC2D2A chr4 15547460 Exonic hg19 NA DA225869 Out-of-frame Inter-chr p25.1 AGC:DMPK p15.32 114474 ChimerSeq ChiTaRs ChiTaRs ANTXR2-ANTXR2 ANTXR2 chr4 80899302 ANTXR2 chr4 80828590 Exonic hg19 NA CN315409 Out-of-frame Intra-chr q21.21 q21.21 114475 ChimerSeq ChiTaRs ChiTaRs PIGG-PIGG PIGG chr4 520901 PIGG chr4 520859 Exonic hg19 NA T92289 Out-of-frame Intra-chr p16.3 p16.3 114476 ChimerSeq ChiTaRs ChiTaRs LAPTM5-CD82 LAPTM5 chr1 31221383 CD82 chr11 44597472 Exonic hg19 NA BI024399 Out-of-frame Inter-chr p35.2 p11.2 Tumor suppressor gene 114477 ChimerSeq ChiTaRs ChiTaRs RD3-RD3 RD3 chr1 211650404 RD3 chr1 211649876 Exonic hg19 NA H93739 Out-of-frame Intra-chr q32.3 q32.3 114478 ChimerSeq ChiTaRs ChiTaRs BTRC-ACIN1 BTRC chr10 103313525 ACIN1 chr14 23548192 Exonic hg19 NA BE819409 Out-of-frame Inter-chr q24.32 q11.2 114479 ChimerSeq ChiTaRs ChiTaRs PLCH2-GABARAPL2 PLCH2 chr1 2436013 GABARAPL2 chr16 75606127 Exonic hg19 NA BM702739 Out-of-frame Inter-chr p36.32 q23.1 114480 ChimerSeq ChiTaRs ChiTaRs SORBS2-CKB SORBS2 chr4 186510383 CKB chr14 103986806 Exonic hg19 NA BQ060799 Out-of-frame Inter-chr q35.1 q32.33 114481 ChimerSeq ChiTaRs ChiTaRs BOK-SNRPB BOK chr2 242513306 SNRPB chr20 2444502 Exonic hg19 NA CB157749 Out-of-frame Inter-chr q37.3 p13 114482 ChimerSeq ChiTaRs ChiTaRs PMS1-FN1 PMS1 chr2 190652767 FN1 chr2 216231050 Exonic hg19 NA BX095959 Out-of-frame Intra-chr q32.2 Oncogene q35 Oncogene 114483 ChimerSeq ChiTaRs ChiTaRs SVEP1-BCYRN1 SVEP1 chr9 113171129 BCYRN1 chrX 70837580 Exonic hg19 NA BF995969 Out-of-frame Inter-chr q31.3 p21 114484 ChimerSeq ChiTaRs ChiTaRs SLC30A9-HOXC6 SLC30A9 chr4 42072675 HOXC6 chr12 54413780 Exonic hg19 NA BF802799 Out-of-frame Inter-chr p13 q13.13 Transcription factor 114485 ChimerSeq ChiTaRs ChiTaRs B4GALT2-B4GALT2 B4GALT2 chr1 44456362 B4GALT2 chr1 44456659 Exonic hg19 NA CA337099 Out-of-frame Intra-chr p34.1 p34.1 114486 ChimerSeq ChiTaRs ChiTaRs TARDBP-LRCH3 TARDBP chr1 11073830 LRCH3 chr3 197562617 Exonic hg19 NA DA652289 Out-of-frame Inter-chr p36.22 q29 114487 ChimerSeq ChiTaRs ChiTaRs CCNY-CCNY CCNY chr10 35734626 CCNY chr10 35734196 Exonic hg19 NA BF870559 Out-of-frame Intra-chr p11.21 p11.21 114488 ChimerSeq ChiTaRs ChiTaRs WHSC1-CHN2 WHSC1 chr4 1982890 CHN2 chr7 29249708 Exonic hg19 NA AW935679 Out-of-frame Inter-chr Oncogene p14.3 114489 ChimerSeq ChiTaRs ChiTaRs SYN1-PDGFRB SYN1 chrX 47442882 PDGFRB chr5 149505801 Exonic hg19 NA BF824769 Out-of-frame Inter-chr p11.23 q32 Oncogene 114490 ChimerSeq ChiTaRs ChiTaRs PPM1K-IDS PPM1K chr4 89205148 IDS chrX 148561256 Exonic hg19 NA AA984459 Out-of-frame Inter-chr q22.1 q28 114491 ChimerSeq ChiTaRs ChiTaRs FDPS-GPI FDPS chr1 155290456 GPI chr19 34868441 Exonic hg19 NA CB046419 Out-of-frame Inter-chr q22 114492 ChimerSeq ChiTaRs ChiTaRs NUDCD3-NUDCD3 NUDCD3 chr7 44423988 NUDCD3 chr7 44424027 Exonic hg19 NA AA429879 Out-of-frame Intra-chr p13 p13 114493 ChimerSeq ChiTaRs ChiTaRs RASGEF1B-LNPEP RASGEF1B chr4 82392035 LNPEP chr5 96363436 Exonic hg19 NA BI909609 5'UTR-CDS Inter-chr q21.22 q15 114494 ChimerSeq ChiTaRs ChiTaRs STK39-PCNX STK39 chr2 168810759 PCNX chr14 71445102 Exonic hg19 NA AW590929 Out-of-frame Inter-chr q24.3 114495 ChimerSeq ChiTaRs ChiTaRs PAPPA-LRP2 PAPPA chr9 118988381 LRP2 chr2 169983691 Exonic hg19 NA BQ369809 Out-of-frame Inter-chr q33.1 q31.1 114496 ChimerSeq ChiTaRs ChiTaRs ADAMTS19-SLC27A6 ADAMTS19 chr5 128797450 SLC27A6 chr5 128364037 Exonic hg19 NA DN914949 Out-of-frame Intra-chr q23.3 q23.3 114497 ChimerSeq ChiTaRs ChiTaRs MOB1B-MOB1B MOB1B chr4 71795880 MOB1B chr4 71836724 Exonic hg19 NA CV342709 Out-of-frame Intra-chr q13.3 Tumor suppressor gene q13.3 Tumor suppressor gene 114498 ChimerSeq ChiTaRs ChiTaRs STIM1-STIM1 STIM1 chr11 3939360 STIM1 chr11 3940854 Exonic hg19 NA BE176479 Out-of-frame Intra-chr p15.4 p15.4 114499 ChimerSeq ChiTaRs ChiTaRs ABCC5-TGFBI ABCC5 chr3 183732135 TGFBI chr5 135397183 Exonic hg19 NA BC007229 Out-of-frame Inter-chr q27.1 q31.1 Tumor suppressor gene 114500 ChimerSeq ChiTaRs ChiTaRs RAB18-RAB18 RAB18 chr10 27827815 RAB18 chr10 27822755 Exonic hg19 NA EL595119 Out-of-frame Intra-chr p12.1 p12.1 114501 ChimerSeq ChiTaRs ChiTaRs CD1C-CAMTA1 CD1C chr1 158262009 CAMTA1 chr1 7550941 Exonic hg19 NA DY655389 Out-of-frame Intra-chr q23.1 p36.31 Tumor suppressor gene Transcription factor 114502 ChimerSeq ChiTaRs ChiTaRs PPAP2B-PPAP2B PPAP2B chr1 57005134 PPAP2B chr1 57004744 Exonic hg19 NA BF842389 Out-of-frame Intra-chr 114503 ChimerSeq ChiTaRs ChiTaRs VPS37A-VPS37A VPS37A chr8 17154256 VPS37A chr8 17154557 Exonic hg19 NA BQ013499 Out-of-frame Intra-chr p22 p22 114504 ChimerSeq ChiTaRs ChiTaRs RIMS2-RIMS2 RIMS2 chr8 105161079 RIMS2 chr8 105080739 Exonic hg19 NA AV746139 Out-of-frame Intra-chr q22.3 q22.3 114505 ChimerSeq ChiTaRs ChiTaRs TTC21B-DOCK1 TTC21B chr2 166730595 DOCK1 chr10 128883442 Exonic hg19 NA BX111099 Out-of-frame Inter-chr q24.3 q26.2 114506 ChimerSeq ChiTaRs ChiTaRs SEMA6A-DLG5 SEMA6A chr5 115782171 DLG5 chr10 79572329 Exonic hg19 NA BF990529 Out-of-frame Inter-chr q23.1 q22.3 114507 ChimerSeq ChiTaRs ChiTaRs RTKN-TGM2 RTKN chr2 74654576 TGM2 chr20 36758239 Exonic hg19 NA BI035789 Out-of-frame Inter-chr p13.1 q11.23 114508 ChimerSeq ChiTaRs ChiTaRs FANCC-C20orf112 FANCC chr9 97870263 C20orf112 chr20 31064036 Exonic hg19 NA BE160689 Out-of-frame Inter-chr q22.32 Oncogene 114509 ChimerSeq ChiTaRs ChiTaRs GUK1-FADS2 GUK1 chr1 228333551 FADS2 chr11 61634285 Exonic hg19 NA BG742639 Out-of-frame Inter-chr q42.13 q12.2 114510 ChimerSeq ChiTaRs ChiTaRs GPR115-LAMB3 GPR115 chr6 47680616 LAMB3 chr1 209809847 Exonic hg19 NA AW631369 Out-of-frame Inter-chr q32.2 114511 ChimerSeq ChiTaRs ChiTaRs KCTD7-CST3 KCTD7 chr7 66108034 CST3 chr20 23614549 Exonic hg19 NA BM662819 Out-of-frame Inter-chr q11.21 p11.21 114512 ChimerSeq ChiTaRs ChiTaRs GOLGA4-RBM27 GOLGA4 chr3 37370478 RBM27 chr5 145610361 Exonic hg19 NA BG988919 Out-of-frame Inter-chr p22.2 q32 114513 ChimerSeq ChiTaRs ChiTaRs PLXNB1-ANKLE2 PLXNB1 chr3 48466284 ANKLE2 chr12 133312015 Exonic hg19 NA BG980949 Out-of-frame Inter-chr p21.31 q24.33 114514 ChimerSeq ChiTaRs ChiTaRs DPYSL3-HEATR2 DPYSL3 chr5 146770529 HEATR2 chr7 825576 Exonic hg19 NA M78259 Out-of-frame Inter-chr q32 114515 ChimerSeq ChiTaRs ChiTaRs RNF220-CTSZ RNF220 chr1 45047204 CTSZ chr20 57571735 Exonic hg19 NA AW858929 Out-of-frame Inter-chr p34.1 q13.32 114516 ChimerSeq ChiTaRs ChiTaRs LDB2-LDB2 LDB2 chr4 16879230 LDB2 chr4 16883226 Exonic hg19 NA AK024979 Out-of-frame Intra-chr p15.32 p15.32 114517 ChimerSeq ChiTaRs ChiTaRs EZH2-ATP2A2 EZH2 chr7 148579372 ATP2A2 chr12 110788015 Exonic hg19 NA AI207549 Out-of-frame Inter-chr q36.1 Oncogene Tumor suppressor gene q24.11 114518 ChimerSeq ChiTaRs ChiTaRs SND1-MYOG SND1 chr7 127569372 MYOG chr1 203054731 Exonic hg19 NA BF204429 Out-of-frame Inter-chr q32.1 q32.1 Transcription factor 114519 ChimerSeq ChiTaRs ChiTaRs KIF5C-CASP1 KIF5C chr2 149843056 CASP1 chr11 104912288 Exonic hg19 NA BP424829 Out-of-frame Inter-chr q22.3 114520 ChimerSeq ChiTaRs ChiTaRs SCMH1-AKAP9 SCMH1 chr1 41528607 AKAP9 chr7 91702227 Exonic hg19 NA AW468719 Out-of-frame Inter-chr p34.2 Transcription factor q21.2 Oncogene 114521 ChimerSeq ChiTaRs ChiTaRs LOC100302640-SLC12A8 LOC100302640 chr3 106794383 SLC12A8 chr3 124806683 Exonic hg19 NA BF375829 Out-of-frame Intra-chr q21.2 114522 ChimerSeq ChiTaRs ChiTaRs CD59-CD59 CD59 chr11 33727587 CD59 chr11 33731244 Exonic hg19 NA BE079919 Out-of-frame Intra-chr p13 p13 114523 ChimerSeq ChiTaRs ChiTaRs ZNF638-KAZN ZNF638 chr2 71660365 KAZN chr1 15345025 Exonic hg19 NA BE939999 Out-of-frame Inter-chr p13.3 p36.21 114524 ChimerSeq ChiTaRs ChiTaRs IGSF11-PPP2R5B IGSF11 chr3 118691581 PPP2R5B chr11 64692198 Exonic hg19 NA AB209289 Out-of-frame Inter-chr q13.32 q13.1 114525 ChimerSeq ChiTaRs ChiTaRs SLC35A4-NUMA1 SLC35A4 chr5 139948682 NUMA1 chr11 71779258 Exonic hg19 NA AI243479 Out-of-frame Inter-chr q31.3 q13.4 Oncogene 114526 ChimerSeq ChiTaRs ChiTaRs TGOLN2-TGOLN2 TGOLN2 chr2 85549483 TGOLN2 chr2 85549479 Exonic hg19 NA BE933259 Out-of-frame Intra-chr p11.2 p11.2 114527 ChimerSeq ChiTaRs ChiTaRs ZNHIT6-ZNHIT6 ZNHIT6 chr1 86118903 ZNHIT6 chr1 86118929 Exonic hg19 NA CA314359 Out-of-frame Intra-chr p22.3 p22.3 114528 ChimerSeq ChiTaRs ChiTaRs SPIN1-SPIN1 SPIN1 chr9 91090841 SPIN1 chr9 91090475 Exonic hg19 NA AI014719 Out-of-frame Intra-chr q22.1 q22.1 114529 ChimerSeq ChiTaRs ChiTaRs HSPB7-HSPB7 HSPB7 chr1 16341593 HSPB7 chr1 16340845 Exonic hg19 NA AJ711059 Out-of-frame Intra-chr p36.13 Tumor suppressor gene p36.13 Tumor suppressor gene 114530 ChimerSeq ChiTaRs ChiTaRs LIMCH1-C11orf58 LIMCH1 chr4 41700820 C11orf58 chr11 16774200 Exonic hg19 NA BF929909 Out-of-frame Inter-chr p13 p15.2 114531 ChimerSeq ChiTaRs ChiTaRs HLA-A-HLA-A HLA-A chr6 1424240 HLA-A chr6 1424289 Exonic hg19 NA BF854439 Out-of-frame Intra-chr p22.1 p22.1 114532 ChimerSeq ChiTaRs ChiTaRs GUCY1A3-SEC61A1 GUCY1A3 chr4 156653746 SEC61A1 chr3 127788885 Exonic hg19 NA AW897979 Out-of-frame Inter-chr q32.1 q21.3 114533 ChimerSeq ChiTaRs ChiTaRs ALDH18A1-ALDH18A1 ALDH18A1 chr10 97416468 ALDH18A1 chr10 97402862 Exonic hg19 NA BP341719 Out-of-frame Intra-chr q24.1 q24.1 114534 ChimerSeq ChiTaRs ChiTaRs HMGCS1-HMGCS1 HMGCS1 chr5 43291083 HMGCS1 chr5 43290590 Exonic hg19 NA AL048839 Out-of-frame Intra-chr p12 p12 114535 ChimerSeq ChiTaRs ChiTaRs BBX-BBX BBX chr3 107524706 BBX chr3 107520032 Exonic hg19 NA BU675349 Out-of-frame Intra-chr q13.12 Transcription factor q13.12 Transcription factor 114536 ChimerSeq ChiTaRs ChiTaRs SLC12A2-ATF5 SLC12A2 chr5 127524368 ATF5 chr19 50436353 Exonic hg19 NA BQ322269 Out-of-frame Inter-chr q23.3 q13.33 Transcription factor 114537 ChimerSeq ChiTaRs ChiTaRs SENP5-PALMD SENP5 chr3 196656397 PALMD chr1 100133481 Exonic hg19 NA AW847799 Out-of-frame Inter-chr q29 p21.2 114538 ChimerSeq ChiTaRs ChiTaRs MRPL14-MRPL14 MRPL14 chr6 44081649 MRPL14 chr6 44081868 Exonic hg19 NA AI217449 Out-of-frame Intra-chr p21.1 p21.1 114539 ChimerSeq ChiTaRs ChiTaRs FAM193A-FAM193A FAM193A chr4 2734292 FAM193A chr4 2734022 Exonic hg19 NA BU674639 Out-of-frame Intra-chr p16.3 p16.3 114540 ChimerSeq ChiTaRs ChiTaRs CLK2-DLGAP1 CLK2 chr1 155233833 DLGAP1 chr18 4345809 Exonic hg19 NA AW385079 Out-of-frame Inter-chr q22 CMGC:CLK p11.31 114541 ChimerSeq ChiTaRs ChiTaRs GOPC-GOPC GOPC chr6 117881795 GOPC chr6 117881778 Exonic hg19 NA BM968919 Out-of-frame Intra-chr q22.1 q22.1 114542 ChimerSeq ChiTaRs ChiTaRs GINS4-GINS4 GINS4 chr8 41402270 GINS4 chr8 41402034 Exonic hg19 NA BE138739 Out-of-frame Intra-chr p11.21 p11.21 114543 ChimerSeq ChiTaRs ChiTaRs AVL9-AVL9 AVL9 chr7 32960378 AVL9 chr7 32969507 Exonic hg19 NA AW753359 Out-of-frame Intra-chr p14.3 p14.3 114544 ChimerSeq ChiTaRs ChiTaRs CDH23-DLG2 CDH23 chr10 73510655 DLG2 chr11 84752058 Exonic hg19 NA T05549 Out-of-frame Inter-chr q22.1 q14.1 114545 ChimerSeq ChiTaRs ChiTaRs HSD17B8-HSD17B8 HSD17B8 chr6 4405306 HSD17B8 chr6 4405312 Exonic hg19 NA BI007869 Out-of-frame Intra-chr 114546 ChimerSeq ChiTaRs ChiTaRs PTPRF-PTPRF PTPRF chr1 44088509 PTPRF chr1 44088483 Exonic hg19 NA BG292289 Out-of-frame Intra-chr p34.2 p34.2 114547 ChimerSeq ChiTaRs ChiTaRs PNPT1-ASAP1 PNPT1 chr2 55900040 ASAP1 chr8 131065683 Exonic hg19 NA BF895069 Out-of-frame Inter-chr p16.1 q24.22 114548 ChimerSeq ChiTaRs ChiTaRs RPL12-RPL12 RPL12 chr9 130213673 RPL12 chr9 130211563 Exonic hg19 NA AW277039 Out-of-frame Intra-chr q33.3 q33.3 114549 ChimerSeq ChiTaRs ChiTaRs SRBD1-MTMR7 SRBD1 chr2 45790175 MTMR7 chr8 17161328 Exonic hg19 NA AL117549 Out-of-frame Inter-chr p21 p22 114550 ChimerSeq ChiTaRs ChiTaRs MGEA5-SLC36A1 MGEA5 chr10 103578197 SLC36A1 chr5 150837706 Exonic hg19 NA DA433189 Out-of-frame Inter-chr q24.32 q33.1 114551 ChimerSeq ChiTaRs ChiTaRs ARHGAP15-LILRA6 ARHGAP15 chr2 144110407 LILRA6 chr19 54783706 Exonic hg19 NA DA935999 Out-of-frame Inter-chr q22.2 114552 ChimerSeq ChiTaRs ChiTaRs PLXNB1-SLC25A1 PLXNB1 chr3 48445430 SLC25A1 chr22 19163746 Exonic hg19 NA AA086119 Out-of-frame Inter-chr p21.31 q11.21 114553 ChimerSeq ChiTaRs ChiTaRs MEGF9-MEGF9 MEGF9 chr9 123364161 MEGF9 chr9 123363527 Exonic hg19 NA BQ723219 Out-of-frame Intra-chr q33.2 q33.2 114554 ChimerSeq ChiTaRs ChiTaRs VPS72-PNN VPS72 chr1 151149044 PNN chr14 39646623 Exonic hg19 NA AW449089 Out-of-frame Inter-chr q21.3 q21.1 Tumor suppressor gene 114555 ChimerSeq ChiTaRs ChiTaRs CAMK2N1-LPGAT1 CAMK2N1 chr1 20809386 LPGAT1 chr1 211983165 Exonic hg19 NA BE936059 Out-of-frame Intra-chr p36.12 Tumor suppressor gene q32.3 114556 ChimerSeq ChiTaRs ChiTaRs RBM47-CDK14 RBM47 chr4 40505543 CDK14 chr7 90610407 Exonic hg19 NA AW993729 Out-of-frame Inter-chr p14 q21.13 114557 ChimerSeq ChiTaRs ChiTaRs LRIF1-SPOP LRIF1 chr1 111499798 SPOP chr17 47738793 Exonic hg19 NA BE066439 Out-of-frame Inter-chr p13.3 q21.33 Oncogene Tumor suppressor gene 114558 ChimerSeq ChiTaRs ChiTaRs CDK5RAP2-CDK5RAP2 CDK5RAP2 chr9 123151422 CDK5RAP2 chr9 123151149 Exonic hg19 NA BU540229 Out-of-frame Intra-chr q33.2 q33.2 114559 ChimerSeq ChiTaRs ChiTaRs GRAMD3-GRAMD3 GRAMD3 chr5 125811127 GRAMD3 chr5 125810566 Exonic hg19 NA BM983689 Out-of-frame Intra-chr q23.2 q23.2 114560 ChimerSeq ChiTaRs ChiTaRs FAM20B-FAM20B FAM20B chr1 179044743 FAM20B chr1 179044749 Exonic hg19 NA N84069 Out-of-frame Intra-chr q25.2 q25.2 114561 ChimerSeq ChiTaRs ChiTaRs SMARCC1-MSN SMARCC1 chr3 47704672 MSN chrX 64959969 Exonic hg19 NA BE179599 Out-of-frame Inter-chr p21.31 Tumor suppressor gene q12 114562 ChimerSeq ChiTaRs ChiTaRs FKBP5-FKBP5 FKBP5 chr6 35587004 FKBP5 chr6 35544960 Exonic hg19 NA BG960579 Out-of-frame Intra-chr p21.31 p21.31 114563 ChimerSeq ChiTaRs ChiTaRs IPO7-IPO7 IPO7 chr11 9469669 IPO7 chr11 9468776 Exonic hg19 NA CA312459 Out-of-frame Intra-chr p15.4 p15.4 114564 ChimerSeq ChiTaRs ChiTaRs ITPRIPL1-TSPAN31 ITPRIPL1 chr2 96994060 TSPAN31 chr12 58141794 Exonic hg19 NA AW118879 Out-of-frame Inter-chr q11.2 q14.1 114565 ChimerSeq ChiTaRs ChiTaRs ARMCX4-NSD1 ARMCX4 chrX 100708152 NSD1 chr5 176569434 Exonic hg19 NA BE173509 Out-of-frame Inter-chr q22.1 q35.3 Oncogene 114566 ChimerSeq ChiTaRs ChiTaRs GNL2-RNF216 GNL2 chr1 38061540 RNF216 chr7 5704289 Exonic hg19 NA BP249749 Out-of-frame Inter-chr p34.3 p22.1 114567 ChimerSeq ChiTaRs ChiTaRs LUC7L2-LUC7L2 LUC7L2 chr7 139104198 LUC7L2 chr7 139094352 Exonic hg19 NA DA687959 Out-of-frame Intra-chr q34 q34 114568 ChimerSeq ChiTaRs ChiTaRs C1orf86-PNO1 C1orf86 chr1 2122971 PNO1 chr2 68402605 Exonic hg19 NA BC018779 Out-of-frame Inter-chr p14 114569 ChimerSeq ChiTaRs ChiTaRs GALNT14-GALNT14 GALNT14 chr2 31278047 GALNT14 chr2 31282580 Exonic hg19 NA CF143349 Out-of-frame Intra-chr p23.1 p23.1 114570 ChimerSeq ChiTaRs ChiTaRs LIN9-PAFAH1B2 LIN9 chr1 226453762 PAFAH1B2 chr11 117039777 Exonic hg19 NA AA318969 Out-of-frame Inter-chr q42.12 Tumor suppressor gene q23.3 114571 ChimerSeq ChiTaRs ChiTaRs ALPK1-ELP2 ALPK1 chr4 113252491 ELP2 chr18 33739698 Exonic hg19 NA BQ359089 Out-of-frame Inter-chr q25 q12.2 114572 ChimerSeq ChiTaRs ChiTaRs IER5L-RRAGC IER5L chr9 131940511 RRAGC chr1 39318091 Exonic hg19 NA BG336879 Out-of-frame Inter-chr q34.11 p34.3 114573 ChimerSeq ChiTaRs ChiTaRs PTPRD-SLC12A6 PTPRD chr9 9129258 SLC12A6 chr15 34619124 Exonic hg19 NA BU853869 Out-of-frame Inter-chr Oncogene Tumor suppressor gene q14 114574 ChimerSeq ChiTaRs ChiTaRs C1orf56-CDC42SE1 C1orf56 chr1 151023874 CDC42SE1 chr1 151023917 Exonic hg19 NA AI741399 Out-of-frame Intra-chr q21.3 q21.3 114575 ChimerSeq ChiTaRs ChiTaRs MPP7-OPA3 MPP7 chr10 28363721 OPA3 chr19 46057688 Exonic hg19 NA BF926389 Out-of-frame Inter-chr p12.1 q13.32 114576 ChimerSeq ChiTaRs ChiTaRs IGF2BP2-RASSF6 IGF2BP2 chr3 185508134 RASSF6 chr4 74449093 Exonic hg19 NA BQ353349 Out-of-frame Inter-chr q27.2 q13.3 114577 ChimerSeq ChiTaRs ChiTaRs RPS24-LOC100134368 RPS24 chr10 79800455 LOC100134368 chr16 437240 Exonic hg19 NA CF130069 Out-of-frame Inter-chr q22.3 114578 ChimerSeq ChiTaRs ChiTaRs DAG1-DAG1 DAG1 chr3 49572140 DAG1 chr3 49570620 Exonic hg19 NA AA348169 Out-of-frame Intra-chr p21.31 p21.31 114579 ChimerSeq ChiTaRs ChiTaRs SUSD3-SUSD3 SUSD3 chr9 95840238 SUSD3 chr9 95840220 Exonic hg19 NA BQ049919 Out-of-frame Intra-chr q22.31 q22.31 114580 ChimerSeq ChiTaRs ChiTaRs FAM20B-PRSS21 FAM20B chr1 179013356 PRSS21 chr16 2867851 Exonic hg19 NA AW379529 Out-of-frame Inter-chr q25.2 114581 ChimerSeq ChiTaRs ChiTaRs NCOA2-PTPRE NCOA2 chr8 71110761 PTPRE chr10 129789785 Exonic hg19 NA BE009179 Out-of-frame Inter-chr q13.3 Oncogene Transcription factor q26.2 114582 ChimerSeq ChiTaRs ChiTaRs ENTPD4-ENTPD4 ENTPD4 chr8 23293935 ENTPD4 chr8 23293440 Exonic hg19 NA BI001449 Out-of-frame Intra-chr p21.3 p21.3 114583 ChimerSeq ChiTaRs ChiTaRs FMNL2-FBXL17 FMNL2 chr2 153220995 FBXL17 chr5 107296921 Exonic hg19 NA BF993349 Out-of-frame Inter-chr q23.3 q21.3 114584 ChimerSeq ChiTaRs ChiTaRs SSR1-HPS3 SSR1 chr6 7299072 HPS3 chr3 148885009 Exonic hg19 NA BE936569 Out-of-frame Inter-chr p24.3 q24 114585 ChimerSeq ChiTaRs ChiTaRs EMILIN1-EMILIN1 EMILIN1 chr2 27309271 EMILIN1 chr2 27308027 Exonic hg19 NA BF514389 3'UTR-CDS Intra-chr p23.3 p23.3 114586 ChimerSeq ChiTaRs ChiTaRs MOCS2-PTH2R MOCS2 chr5 52402591 PTH2R chr2 209382881 Exonic hg19 NA AA659769 Out-of-frame Inter-chr q11.2 q34 114587 ChimerSeq ChiTaRs ChiTaRs LAMP2-FNIP2 LAMP2 chrX 119575631 FNIP2 chr4 159772831 Exonic hg19 NA BF989399 Out-of-frame Inter-chr q24 q32.1 114588 ChimerSeq ChiTaRs ChiTaRs GPD2-RASAL2 GPD2 chr2 157336573 RASAL2 chr1 178412304 Exonic hg19 NA BE815959 Out-of-frame Inter-chr q24.1 q25.2 Tumor suppressor gene 114589 ChimerSeq ChiTaRs ChiTaRs CDV3-MBP CDV3 chr3 133297269 MBP chr18 74728890 Exonic hg19 NA DA349409 Out-of-frame Inter-chr q22.1 q23 114590 ChimerSeq ChiTaRs ChiTaRs SEC62-SEC62 SEC62 chr3 169700672 SEC62 chr3 169706076 Exonic hg19 NA CB250599 Out-of-frame Intra-chr q26.2 q26.2 114591 ChimerSeq ChiTaRs ChiTaRs EPC2-THRB EPC2 chr2 149528741 THRB chr3 24163438 Exonic hg19 NA BE836639 Out-of-frame Inter-chr q23.1 p24.2 Tumor suppressor gene Transcription factor 114592 ChimerSeq ChiTaRs ChiTaRs EPB41-EPB41 EPB41 chr1 29446553 EPB41 chr1 29314051 Exonic hg19 NA BC081539 Out-of-frame Intra-chr p35.3 Tumor suppressor gene p35.3 Tumor suppressor gene 114593 ChimerSeq ChiTaRs ChiTaRs CELF2-LRFN1 CELF2 chr10 11128079 LRFN1 chr19 39804617 Exonic hg19 NA T06999 Out-of-frame Inter-chr p14 q13.2 114594 ChimerSeq ChiTaRs ChiTaRs NFIA-NFIA NFIA chr1 61923894 NFIA chr1 61924671 Exonic hg19 NA BU734929 Out-of-frame Intra-chr p31.3 Transcription factor p31.3 Transcription factor 114595 ChimerSeq ChiTaRs ChiTaRs FRZB-SDC2 FRZB chr2 183699376 SDC2 chr8 97622338 Exonic hg19 NA AI366039 Out-of-frame Inter-chr q32.1 q22.1 114596 ChimerSeq ChiTaRs ChiTaRs RAB3GAP2-RAB3GAP2 RAB3GAP2 chr1 220322416 RAB3GAP2 chr1 220322420 Exonic hg19 NA BE926019 Out-of-frame Intra-chr q41 q41 114597 ChimerSeq ChiTaRs ChiTaRs POC1A-TBC1D22A POC1A chr3 52406965 TBC1D22A chr22 47281529 Exonic hg19 NA BF804749 Out-of-frame Inter-chr p21.2 q13.31 114598 ChimerSeq ChiTaRs ChiTaRs TMEM184A-TMEM184A TMEM184A chr7 1584065 TMEM184A chr7 1584014 Exonic hg19 NA BG003089 Out-of-frame Intra-chr p22.3 p22.3 114599 ChimerSeq ChiTaRs ChiTaRs NAV2-HNRNPH1 NAV2 chr11 19963746 HNRNPH1 chr5 179044922 Exonic hg19 NA BF839309 Out-of-frame Inter-chr p15.1 q35.3 114600 ChimerSeq ChiTaRs ChiTaRs DES-DES DES chr2 220288528 DES chr2 220285027 Exonic hg19 NA BG875589 Out-of-frame Intra-chr q35 q35 114601 ChimerSeq ChiTaRs ChiTaRs VAV2-EFNB1 VAV2 chr9 136633110 EFNB1 chrX 68060258 Exonic hg19 NA BF820909 Out-of-frame Inter-chr q34.2 q13.1 114602 ChimerSeq ChiTaRs ChiTaRs ZC3HC1-MTMR1 ZC3HC1 chr7 129677752 MTMR1 chrX 149880963 Exonic hg19 NA BF365519 Out-of-frame Inter-chr q32.2 q28 114603 ChimerSeq ChiTaRs ChiTaRs TRIM66-SH3GLB1 TRIM66 chr11 8635461 SH3GLB1 chr1 87189996 Exonic hg19 NA BF904839 Out-of-frame Inter-chr p15.4 p22.3 Tumor suppressor gene 114604 ChimerSeq ChiTaRs ChiTaRs MDK-RABGAP1 MDK chr11 46405349 RABGAP1 chr9 125796378 Exonic hg19 NA AI364889 Out-of-frame Inter-chr p11.2 q33.2 114605 ChimerSeq ChiTaRs ChiTaRs AUP1-EEF2 AUP1 chr2 74754188 EEF2 chr19 3981945 Exonic hg19 NA AA706989 Out-of-frame Inter-chr p13.1 p13.3 114606 ChimerSeq ChiTaRs ChiTaRs ENPP2-C5orf55 ENPP2 chr8 120569457 C5orf55 chr5 442697 Exonic hg19 NA BM508959 Out-of-frame Inter-chr q24.12 114607 ChimerSeq ChiTaRs ChiTaRs DNMT3A-NUMA1 DNMT3A chr2 25494403 NUMA1 chr11 71714303 Exonic hg19 NA BF083029 Out-of-frame Inter-chr p23.3 Oncogene Tumor suppressor gene q13.4 Oncogene 114608 ChimerSeq ChiTaRs ChiTaRs ITGB1-ITGB1 ITGB1 chr10 33221475 ITGB1 chr10 33217150 Exonic hg19 NA AA852709 Out-of-frame Intra-chr p11.22 Tumor suppressor gene p11.22 Tumor suppressor gene 114609 ChimerSeq ChiTaRs ChiTaRs UBR3-MEOX2 UBR3 chr2 170917928 MEOX2 chr7 15718919 Exonic hg19 NA BM693239 Out-of-frame Inter-chr q31.1 p21.2 Transcription factor 114610 ChimerSeq ChiTaRs ChiTaRs HIATL1-HIATL1 HIATL1 chr9 97223149 HIATL1 chr9 97223085 Exonic hg19 NA AA541549 Out-of-frame Intra-chr 114611 ChimerSeq ChiTaRs ChiTaRs SLC25A12-SLC25A12 SLC25A12 chr2 172675307 SLC25A12 chr2 172678638 Exonic hg19 NA AW845689 Out-of-frame Intra-chr q31.1 q31.1 114612 ChimerSeq ChiTaRs ChiTaRs RTN4-ATP5G2 RTN4 chr2 55200334 ATP5G2 chr12 54058949 Exonic hg19 NA BU589519 CDS-3'UTR Inter-chr p16.1 Tumor suppressor gene q13.13 114613 ChimerSeq ChiTaRs ChiTaRs NUP205-NUP205 NUP205 chr7 135330322 NUP205 chr7 135330295 Exonic hg19 NA BM453649 Out-of-frame Intra-chr q33 q33 114614 ChimerSeq ChiTaRs ChiTaRs PARD3-FAM134B PARD3 chr10 34606266 FAM134B chr5 16481118 Exonic hg19 NA AJ708069 Out-of-frame Inter-chr p11.21 114615 ChimerSeq ChiTaRs ChiTaRs RTN4-UTP3 RTN4 chr2 55200046 UTP3 chr4 71554967 Exonic hg19 NA BU620039 Out-of-frame Inter-chr p16.1 Tumor suppressor gene q13.3 114616 ChimerSeq ChiTaRs ChiTaRs GAS5-LILRA6 GAS5 chr1 173835833 LILRA6 chr19 54783661 Exonic hg19 NA DA673219 Out-of-frame Inter-chr q25.1 Tumor suppressor gene 114617 ChimerSeq ChiTaRs ChiTaRs ANKRD1-ATP8B5P ANKRD1 chr10 92680847 ATP8B5P chr9 35406896 Exonic hg19 NA BP259299 Out-of-frame Inter-chr q23.31 p13.3 114618 ChimerSeq ChiTaRs ChiTaRs CDKAL1-MX2 CDKAL1 chr6 21080105 MX2 chr21 42749868 Exonic hg19 NA BF089619 Out-of-frame Inter-chr p22.3 q22.3 114619 ChimerSeq ChiTaRs ChiTaRs TNS3-EBF1 TNS3 chr7 47421198 EBF1 chr5 158309685 Exonic hg19 NA BQ366999 Out-of-frame Inter-chr p12.3 q33.3 Transcription factor 114620 ChimerSeq ChiTaRs ChiTaRs TLE4-UBC TLE4 chr9 82291611 UBC chr12 125398040 Exonic hg19 NA DA362969 Out-of-frame Inter-chr q21.31 q24.31 114621 ChimerSeq ChiTaRs ChiTaRs COL12A1-COL12A1 COL12A1 chr6 75794213 COL12A1 chr6 75794202 Exonic hg19 NA AA541569 Out-of-frame Intra-chr q14.1 q14.1 114622 ChimerSeq ChiTaRs ChiTaRs CELSR3-CELSR3 CELSR3 chr3 48709981 CELSR3 chr3 48673896 Exonic hg19 NA AY714129 Out-of-frame Intra-chr p21.31 p21.31 114623 ChimerSeq ChiTaRs ChiTaRs TNIK-RNF8 TNIK chr3 170877637 RNF8 chr6 37358785 Exonic hg19 NA AW891339 Out-of-frame Inter-chr q26.31 STE:STE20 p21.2 Tumor suppressor gene 114624 ChimerSeq ChiTaRs ChiTaRs FBXO9-FBXO9 FBXO9 chr6 52938419 FBXO9 chr6 52935879 Exonic hg19 NA N67589 Out-of-frame Intra-chr p12.1 p12.1 114625 ChimerSeq ChiTaRs ChiTaRs TCTEX1D2-TCTEX1D2 TCTEX1D2 chr3 196018153 TCTEX1D2 chr3 196018121 Exonic hg19 NA BU678979 Out-of-frame Intra-chr q29 q29 114626 ChimerSeq ChiTaRs ChiTaRs CDC25A-PAFAH1B2 CDC25A chr3 48215526 PAFAH1B2 chr11 117039756 Exonic hg19 NA BU662239 Out-of-frame Inter-chr p21.31 q23.3 114627 ChimerSeq ChiTaRs ChiTaRs THBS3-FBXW11 THBS3 chr1 155175292 FBXW11 chr5 171391015 Exonic hg19 NA BE159509 Out-of-frame Inter-chr q22 q35.1 114628 ChimerSeq ChiTaRs ChiTaRs ZNF618-ZNF618 ZNF618 chr9 116639881 ZNF618 chr9 116639845 Exonic hg19 NA AA346199 Out-of-frame Intra-chr q32 Transcription factor q32 Transcription factor 114629 ChimerSeq ChiTaRs ChiTaRs KLHL8-HIST1H2AC KLHL8 chr4 88088395 HIST1H2AC chr6 26124945 Exonic hg19 NA BQ348909 Out-of-frame Inter-chr q22.1 p22.2 114630 ChimerSeq ChiTaRs ChiTaRs TEAD3-TEAD3 TEAD3 chr6 35464822 TEAD3 chr6 35446079 Exonic hg19 NA CF125399 Out-of-frame Intra-chr p21.31 Transcription factor p21.31 Transcription factor 114631 ChimerSeq ChiTaRs ChiTaRs C6-MRPL14 C6 chr5 41154083 MRPL14 chr6 44081594 Exonic hg19 NA BE388029 Out-of-frame Inter-chr p13.1 p21.1 114632 ChimerSeq ChiTaRs ChiTaRs CTBP2-CTBP2 CTBP2 chr10 126838428 CTBP2 chr10 126837950 Exonic hg19 NA BF896639 Out-of-frame Intra-chr q26.13 q26.13 114633 ChimerSeq ChiTaRs ChiTaRs TMEM176B-MRPS18B TMEM176B chr7 150488514 MRPS18B chr6 1926311 Exonic hg19 NA AW269879 Out-of-frame Inter-chr q36.1 114634 ChimerSeq ChiTaRs ChiTaRs COLEC11-PITPNC1 COLEC11 chr2 3692045 PITPNC1 chr17 65473099 Exonic hg19 NA AA742449 Out-of-frame Inter-chr p25.3 q24.2 114635 ChimerSeq ChiTaRs ChiTaRs ELP4-MRPL9 ELP4 chr11 31561238 MRPL9 chr1 151732583 Exonic hg19 NA BP431009 Out-of-frame Inter-chr p13 q21.3 114636 ChimerSeq ChiTaRs ChiTaRs PJA2-MALAT1 PJA2 chr5 108714106 MALAT1 chr11 65272778 Exonic hg19 NA BQ355199 Out-of-frame Inter-chr q21.3 q13.1 114637 ChimerSeq ChiTaRs ChiTaRs CPNE5-CPNE5 CPNE5 chr6 36733153 CPNE5 chr6 36710169 Exonic hg19 NA AI656119 Out-of-frame Intra-chr p21.2 p21.2 114638 ChimerSeq ChiTaRs ChiTaRs LIMCH1-RUNX1T1 LIMCH1 chr4 41700527 RUNX1T1 chr8 93081420 Exonic hg19 NA DQ177301 Out-of-frame Inter-chr p13 q21.3 Oncogene 114639 ChimerSeq ChiTaRs ChiTaRs PHACTR2-PDZRN4 PHACTR2 chr6 144138424 PDZRN4 chr12 41814936 Exonic hg19 NA AW894009 Out-of-frame Inter-chr q24.2 q12 114640 ChimerSeq ChiTaRs ChiTaRs UBE2E1-UBE2E1 UBE2E1 chr3 23932801 UBE2E1 chr3 23932617 Exonic hg19 NA BU675579 Out-of-frame Intra-chr p24.2 p24.2 114641 ChimerSeq ChiTaRs ChiTaRs ARHGAP30-ARHGAP30 ARHGAP30 chr1 161018757 ARHGAP30 chr1 161022469 Exonic hg19 NA DA482579 Out-of-frame Intra-chr q23.3 q23.3 114642 ChimerSeq ChiTaRs ChiTaRs CDK13-PDZK1IP1 CDK13 chr7 39995933 PDZK1IP1 chr1 47649265 Exonic hg19 NA U21049 Out-of-frame Inter-chr p14.1 p33 114643 ChimerSeq ChiTaRs ChiTaRs ATG13-FTL ATG13 chr11 46678701 FTL chr19 49469491 Exonic hg19 NA BF857599 Out-of-frame Inter-chr p11.2 q13.33 114644 ChimerSeq ChiTaRs ChiTaRs MAP4-MAP4 MAP4 chr3 47892835 MAP4 chr3 47892938 Exonic hg19 NA AA446689 Out-of-frame Intra-chr p21.31 p21.31 114645 ChimerSeq ChiTaRs ChiTaRs AHCYL1-AHCYL1 AHCYL1 chr1 110566217 AHCYL1 chr1 110565596 Exonic hg19 NA BQ776309 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p13.3 Tumor suppressor gene 114646 ChimerSeq ChiTaRs ChiTaRs HNRNPH3-HSD11B1 HNRNPH3 chr10 70099312 HSD11B1 chr1 209897701 Exonic hg19 NA BG954179 Out-of-frame Inter-chr q21.3 q32.2 114647 ChimerSeq ChiTaRs ChiTaRs CALU-CALU CALU chr7 128410023 CALU chr7 128410023 Exonic hg19 NA DN914239 Out-of-frame Intra-chr q32.1 q32.1 114648 ChimerSeq ChiTaRs ChiTaRs IGJ-IGJ IGJ chr4 71522233 IGJ chr4 71522071 Exonic hg19 NA BF914739 Out-of-frame Intra-chr 114649 ChimerSeq ChiTaRs ChiTaRs BBOX1-KLK7 BBOX1 chr11 27114184 KLK7 chr19 51483708 Exonic hg19 NA BF750399 Out-of-frame Inter-chr p14.2 q13.41 114650 ChimerSeq ChiTaRs ChiTaRs CYFIP2-MGST2 CYFIP2 chr5 156811349 MGST2 chr4 140639642 Exonic hg19 NA AB058719 Out-of-frame Inter-chr q33.3 q31.1 114651 ChimerSeq ChiTaRs ChiTaRs TMEM185A-APRT TMEM185A chrX 148693035 APRT chr16 88876477 Exonic hg19 NA BQ222629 Out-of-frame Inter-chr q28 q24.3 114652 ChimerSeq ChiTaRs ChiTaRs EIF4A2-PPDPF EIF4A2 chr3 186501436 PPDPF chr20 62153365 Exonic hg19 NA BM834299 Out-of-frame Inter-chr q27.3 q13.33 114653 ChimerSeq ChiTaRs ChiTaRs INTS8-EZR INTS8 chr8 95877186 EZR chr6 159194456 Exonic hg19 NA BF370449 Out-of-frame Inter-chr q22.1 q25.3 114654 ChimerSeq ChiTaRs ChiTaRs CDK19-USP14 CDK19 chr6 110974176 USP14 chr18 211368 Exonic hg19 NA AI207519 Out-of-frame Inter-chr q21 p11.32 114655 ChimerSeq ChiTaRs ChiTaRs CRTC2-CRTC2 CRTC2 chr1 153920771 CRTC2 chr1 153920957 Exonic hg19 NA BF836669 Out-of-frame Intra-chr q21.3 q21.3 114656 ChimerSeq ChiTaRs ChiTaRs ABCA11P-UBXN4 ABCA11P chr4 437956 UBXN4 chr2 136541514 Exonic hg19 NA BE764939 Out-of-frame Inter-chr p16.3 q21.3 114657 ChimerSeq ChiTaRs ChiTaRs HIVEP3-LOC646329 HIVEP3 chr1 42095968 LOC646329 chr7 130581102 Exonic hg19 NA CV338499 Out-of-frame Inter-chr p34.2 Tumor suppressor gene Transcription factor 114658 ChimerSeq ChiTaRs ChiTaRs PLXNA4-SCAND1 PLXNA4 chr7 132085354 SCAND1 chr20 34541815 Exonic hg19 NA BF315459 Out-of-frame Inter-chr q32.3 q11.23 114659 ChimerSeq ChiTaRs ChiTaRs KIF20A-C3orf62 KIF20A chr5 137523488 C3orf62 chr3 49308714 Exonic hg19 NA DB306899 Out-of-frame Inter-chr q31.2 p21.31 114660 ChimerSeq ChiTaRs ChiTaRs RYK-C1R RYK chr3 133926352 C1R chr12 7244194 Exonic hg19 NA AU098919 Out-of-frame Inter-chr q22.2 TK:Ryk p13.31 114661 ChimerSeq ChiTaRs ChiTaRs GRINA-GRINA GRINA chr8 145066230 GRINA chr8 145066208 Exonic hg19 NA BG491399 Out-of-frame Intra-chr q24.3 q24.3 114662 ChimerSeq ChiTaRs ChiTaRs AFAP1L1-USP47 AFAP1L1 chr5 148703453 USP47 chr11 11969900 Exonic hg19 NA BF857489 Out-of-frame Inter-chr q32 p15.3 114663 ChimerSeq ChiTaRs ChiTaRs KCNMA1-DCC KCNMA1 chr10 78799376 DCC chr18 51031801 Exonic hg19 NA BF086459 Out-of-frame Inter-chr q22.3 q21.2 Oncogene Tumor suppressor gene 114664 ChimerSeq ChiTaRs ChiTaRs CPSF1-CPSF1 CPSF1 chr8 145620162 CPSF1 chr8 145620196 Exonic hg19 NA BF817869 Out-of-frame Intra-chr q24.3 q24.3 114665 ChimerSeq ChiTaRs ChiTaRs TINAGL1-TACC2 TINAGL1 chr1 32053284 TACC2 chr10 123970736 Exonic hg19 NA BM314429 Out-of-frame Inter-chr p35.2 q26.13 114666 ChimerSeq ChiTaRs ChiTaRs CCNI-CCNI CCNI chr4 77969535 CCNI chr4 77969749 Exonic hg19 NA AW843279 Out-of-frame Intra-chr q21.1 q21.1 114667 ChimerSeq ChiTaRs ChiTaRs FOXO4-VAV3 FOXO4 chrX 70323385 VAV3 chr1 108410638 Exonic hg19 NA AL691579 Out-of-frame Inter-chr q13.1 Tumor suppressor gene Transcription factor p13.3 114668 ChimerSeq ChiTaRs ChiTaRs SH3BP4-SH3BP4 SH3BP4 chr2 235963223 SH3BP4 chr2 235963202 Exonic hg19 NA AA493349 Out-of-frame Intra-chr q37.2 q37.2 114669 ChimerSeq ChiTaRs ChiTaRs DCAF8-PWP1 DCAF8 chr1 160231125 PWP1 chr12 108097462 Exonic hg19 NA N85859 Out-of-frame Inter-chr q23.2 q23.3 114670 ChimerSeq ChiTaRs ChiTaRs DNAH6-CHD6 DNAH6 chr2 84916104 CHD6 chr20 40242327 Exonic hg19 NA BF367299 Out-of-frame Inter-chr p11.2 q12 114671 ChimerSeq ChiTaRs ChiTaRs ZNF695-WARS ZNF695 chr1 247163822 WARS chr14 100817444 Exonic hg19 NA AW794469 Out-of-frame Inter-chr q44 Transcription factor q32.2 114672 ChimerSeq ChiTaRs ChiTaRs RPL37-CFLAR RPL37 chr5 40832612 CFLAR chr2 201981483 Exonic hg19 NA AW136069 Out-of-frame Inter-chr p13.1 q33.1 114673 ChimerSeq ChiTaRs ChiTaRs VAV2-VAV2 VAV2 chr9 136804276 VAV2 chr9 136671248 Exonic hg19 NA BE925899 Out-of-frame Intra-chr q34.2 q34.2 114674 ChimerSeq ChiTaRs ChiTaRs KLHDC3-KLHDC3 KLHDC3 chr6 42988506 KLHDC3 chr6 42985403 Exonic hg19 NA BE254559 Out-of-frame Intra-chr p21.1 p21.1 114675 ChimerSeq ChiTaRs ChiTaRs EIF4G1-EIF4G1 EIF4G1 chr3 184037517 EIF4G1 chr3 184033920 Exonic hg19 NA DA453269 Out-of-frame Intra-chr q27.1 q27.1 114676 ChimerSeq ChiTaRs ChiTaRs TBC1D7-TBC1D7 TBC1D7 chr6 13303744 TBC1D7 chr6 13303828 Exonic hg19 NA BU608959 Out-of-frame Intra-chr p24.1 p24.1 114677 ChimerSeq ChiTaRs ChiTaRs POMGNT2-RMND5A POMGNT2 chr3 43120921 RMND5A chr2 87450943 Exonic hg19 NA BU679409 Out-of-frame Inter-chr p22.1 p11.2 114678 ChimerSeq ChiTaRs ChiTaRs DNAH7-NISCH DNAH7 chr2 196933579 NISCH chr3 52518014 Exonic hg19 NA DB227899 Out-of-frame Inter-chr q32.3 p21.1 114679 ChimerSeq ChiTaRs ChiTaRs GNB1-GNB1 GNB1 chr1 1717496 GNB1 chr1 1717344 Exonic hg19 NA BI862769 Out-of-frame Intra-chr p36.33 p36.33 114680 ChimerSeq ChiTaRs ChiTaRs PALLD-PCGF6 PALLD chr4 169565990 PCGF6 chr10 105077069 Exonic hg19 NA AI911829 Out-of-frame Inter-chr q32.3 q24.33 Transcription factor 114681 ChimerSeq ChiTaRs ChiTaRs GPR110-GPR110 GPR110 chr6 46976934 GPR110 chr6 46976940 Exonic hg19 NA BE003129 Out-of-frame Intra-chr 114682 ChimerSeq ChiTaRs ChiTaRs PPIE-PPIE PPIE chr1 40220792 PPIE chr1 40221018 Exonic hg19 NA BF948149 Out-of-frame Intra-chr p34.2 p34.2 114683 ChimerSeq ChiTaRs ChiTaRs TKT-CPXM2 TKT chr3 53259866 CPXM2 chr10 125537690 Exonic hg19 NA AW880069 Out-of-frame Inter-chr p21.1 Tumor suppressor gene q26.13 114684 ChimerSeq ChiTaRs ChiTaRs HMGA1-HMGA1 HMGA1 chr6 34204999 HMGA1 chr6 34204999 Exonic hg19 NA BG331249 Out-of-frame Intra-chr p21.31 Transcription factor p21.31 Transcription factor 114685 ChimerSeq ChiTaRs ChiTaRs ZSWIM6-ZSWIM6 ZSWIM6 chr5 60686471 ZSWIM6 chr5 60674670 Exonic hg19 NA BE768859 Out-of-frame Intra-chr q12.1 q12.1 114686 ChimerSeq ChiTaRs ChiTaRs LOC100505761-NEAT1 LOC100505761 chr10 104210455 NEAT1 chr11 65193683 Exonic hg19 NA AW204799 Out-of-frame Inter-chr q13.1 114687 ChimerSeq ChiTaRs ChiTaRs FANCL-TSPAN12 FANCL chr2 58390337 TSPAN12 chr7 120427374 Exonic hg19 NA CA945069 Out-of-frame Inter-chr p16.1 q31.31 114688 ChimerSeq ChiTaRs ChiTaRs C7orf63-C7orf63 C7orf63 chr7 89940329 C7orf63 chr7 89939509 Exonic hg19 NA CB854209 Out-of-frame Intra-chr 114689 ChimerSeq ChiTaRs ChiTaRs EIF3B-HSPG2 EIF3B chr7 2405778 HSPG2 chr1 22178575 Exonic hg19 NA AW855179 Out-of-frame Inter-chr p22.3 p36.12 114690 ChimerSeq ChiTaRs ChiTaRs MDM4-MDM4 MDM4 chr1 204512060 MDM4 chr1 204513661 Exonic hg19 NA BG008529 Out-of-frame Intra-chr q32.1 Oncogene q32.1 Oncogene 114691 ChimerSeq ChiTaRs ChiTaRs DDB1-PPM1M DDB1 chr11 61101072 PPM1M chr3 52283220 Exonic hg19 NA BE762649 Out-of-frame Inter-chr q12.2 p21.2 114692 ChimerSeq ChiTaRs ChiTaRs MSH3-MSH3 MSH3 chr5 80037367 MSH3 chr5 80021268 Exonic hg19 NA BE080139 Out-of-frame Intra-chr q14.1 q14.1 114693 ChimerSeq ChiTaRs ChiTaRs WDR27-CRLF2 WDR27 chr6 169954593 CRLF2 chrY 1455147 Exonic hg19 NA AK054789 Out-of-frame Inter-chr q27 p22.33 Oncogene 114694 ChimerSeq ChiTaRs ChiTaRs RC3H1-MTMR6 RC3H1 chr1 173914078 MTMR6 chr13 25852367 Exonic hg19 NA BE147849 Out-of-frame Inter-chr q25.1 q12.13 114695 ChimerSeq ChiTaRs ChiTaRs S100A8-C5orf58 S100A8 chr1 153363549 C5orf58 chr5 169677751 Exonic hg19 NA BI022059 Out-of-frame Inter-chr q21.3 q35.1 114696 ChimerSeq ChiTaRs ChiTaRs NAA50-SNAPC3 NAA50 chr3 113454944 SNAPC3 chr9 15460600 Exonic hg19 NA AA280259 Out-of-frame Inter-chr q13.31 p22.3 114697 ChimerSeq ChiTaRs ChiTaRs IKBKB-STRN4 IKBKB chr8 42189128 STRN4 chr19 47223266 Exonic hg19 NA N98439 Out-of-frame Inter-chr p11.21 Oncogene q13.32 114698 ChimerSeq ChiTaRs ChiTaRs EIF3E-PRSS23 EIF3E chr8 109240524 PRSS23 chr11 86519299 Exonic hg19 NA BF799939 Out-of-frame Inter-chr q23.1 q14.2 114699 ChimerSeq ChiTaRs ChiTaRs CROCC-FAM60A CROCC chr1 17176795 FAM60A chr12 31435624 Exonic hg19 NA CD657772 Out-of-frame Inter-chr p36.13 114700 ChimerSeq ChiTaRs ChiTaRs NDUFS3-NDUFS3 NDUFS3 chr11 47606115 NDUFS3 chr11 47605959 Exonic hg19 NA CA450349 3'UTR-CDS Intra-chr p11.2 p11.2 114701 ChimerSeq ChiTaRs ChiTaRs SERPINE1-DAG1 SERPINE1 chr7 100772208 DAG1 chr3 49524587 Exonic hg19 NA CN267989 Out-of-frame Inter-chr q22.1 p21.31 114702 ChimerSeq ChiTaRs ChiTaRs RTN4-RTN4 RTN4 chr2 55277313 RTN4 chr2 55277315 Exonic hg19 NA CN418139 Out-of-frame Intra-chr p16.1 Tumor suppressor gene p16.1 Tumor suppressor gene 114703 ChimerSeq ChiTaRs ChiTaRs CUEDC2-TRAF3IP2-AS1 CUEDC2 chr10 104189457 TRAF3IP2-AS1 chr6 111808164 Exonic hg19 NA BF930069 Out-of-frame Inter-chr q24.32 q21 114704 ChimerSeq ChiTaRs ChiTaRs PFDN6-SYNJ2BP-COX16 PFDN6 chr6 4490952 SYNJ2BP-COX16 chr14 70836918 Exonic hg19 NA AA234979 Out-of-frame Inter-chr q24.2 114705 ChimerSeq ChiTaRs ChiTaRs DKC1-GCH1 DKC1 chrX 153991256 GCH1 chr14 55349595 Exonic hg19 NA BF798439 Out-of-frame Inter-chr q28 q22.2 114706 ChimerSeq ChiTaRs ChiTaRs ALDH9A1-PSAP ALDH9A1 chr1 165638556 PSAP chr10 73576307 Exonic hg19 NA BP391559 Out-of-frame Inter-chr q24.1 q22.1 114707 ChimerSeq ChiTaRs ChiTaRs FAT1-FAT1 FAT1 chr4 187628204 FAT1 chr4 187630907 Exonic hg19 NA BP349659 Out-of-frame Intra-chr q35.2 Tumor suppressor gene q35.2 Tumor suppressor gene 114708 ChimerSeq ChiTaRs ChiTaRs MFI2-MFI2 MFI2 chr3 196750524 MFI2 chr3 196753535 Exonic hg19 NA CD367979 Out-of-frame Intra-chr 114709 ChimerSeq ChiTaRs ChiTaRs CD36-DCN CD36 chr7 80289988 DCN chr12 91539474 Exonic hg19 NA DR979449 Out-of-frame Inter-chr q21.11 q21.33 Tumor suppressor gene 114710 ChimerSeq ChiTaRs ChiTaRs RCAN2-FAF1 RCAN2 chr6 46315081 FAF1 chr1 50922948 Exonic hg19 NA BF963889 Out-of-frame Inter-chr p12.3 p32.3 114711 ChimerSeq ChiTaRs ChiTaRs FAM120A-FAM120A FAM120A chr9 96322967 FAM120A chr9 96322966 Exonic hg19 NA BF948439 Out-of-frame Intra-chr q22.31 q22.31 114712 ChimerSeq ChiTaRs ChiTaRs KIAA1429-CMIP KIAA1429 chr8 95500932 CMIP chr16 81478824 Exonic hg19 NA AI816939 Out-of-frame Inter-chr q22.1 q23.2 114713 ChimerSeq ChiTaRs ChiTaRs ANKRD26-ANKRD26 ANKRD26 chr10 27323833 ANKRD26 chr10 27335394 Exonic hg19 NA BM450509 Out-of-frame Intra-chr p12.1 p12.1 114714 ChimerSeq ChiTaRs ChiTaRs GSN-GSN GSN chr9 124065261 GSN chr9 124076282 Exonic hg19 NA BF894459 Out-of-frame Intra-chr q33.2 Tumor suppressor gene q33.2 Tumor suppressor gene 114715 ChimerSeq ChiTaRs ChiTaRs LAMC1-LAMC1 LAMC1 chr1 183048300 LAMC1 chr1 183003711 Exonic hg19 NA AW861099 Out-of-frame Intra-chr q25.3 q25.3 114716 ChimerSeq ChiTaRs ChiTaRs MGAT5-MRPL14 MGAT5 chr2 135157743 MRPL14 chr6 44081431 Exonic hg19 NA M86029 Out-of-frame Inter-chr q21.2 p21.1 114717 ChimerSeq ChiTaRs ChiTaRs TGFBR3-SMARCC2 TGFBR3 chr1 92293810 SMARCC2 chr12 56575092 Exonic hg19 NA BF998129 Out-of-frame Inter-chr p22.1 Tumor suppressor gene q13.2 114718 ChimerSeq ChiTaRs ChiTaRs MYT1L-OTUD5 MYT1L chr2 1853927 OTUD5 chrX 48804273 Exonic hg19 NA BG010809 Out-of-frame Inter-chr p25.3 Transcription factor p11.23 114719 ChimerSeq ChiTaRs ChiTaRs CCBL1-CCBL1 CCBL1 chr9 131597662 CCBL1 chr9 131595480 Exonic hg19 NA BF743879 Out-of-frame Intra-chr 114720 ChimerSeq ChiTaRs ChiTaRs RPL7-AP1G2 RPL7 chr8 74205867 AP1G2 chr14 24030899 Exonic hg19 NA DA454229 Out-of-frame Inter-chr q21.11 q11.2 114721 ChimerSeq ChiTaRs ChiTaRs SLC44A4-SLC44A4 SLC44A4 chr6 3164590 SLC44A4 chr6 3164214 Exonic hg19 NA BF509779 Out-of-frame Intra-chr 114722 ChimerSeq ChiTaRs ChiTaRs HIST1H2BG-SRSF5 HIST1H2BG chr6 26216915 SRSF5 chr14 70233859 Exonic hg19 NA DB154789 Out-of-frame Inter-chr p22.2 q24.1 114723 ChimerSeq ChiTaRs ChiTaRs TOMM20-SARNP TOMM20 chr1 235274086 SARNP chr12 56194347 Exonic hg19 NA BF809919 Out-of-frame Inter-chr q42.3 q13.2 114724 ChimerSeq ChiTaRs ChiTaRs UGT2B7-FTO UGT2B7 chr4 69969107 FTO chr16 54146782 Exonic hg19 NA T05729 Out-of-frame Inter-chr q13.2 q12.2 114725 ChimerSeq ChiTaRs ChiTaRs LCORL-PKD2 LCORL chr4 17995557 PKD2 chr4 88998465 Exonic hg19 NA BE934269 Out-of-frame Intra-chr p15.31 Transcription factor q22.1 CAMK:PKD 114726 ChimerSeq ChiTaRs ChiTaRs SYK-SYK SYK chr9 93660831 SYK chr9 93660494 Exonic hg19 NA CB242349 Out-of-frame Intra-chr q22.2 TK:Syk Oncogene Tumor suppressor gene q22.2 TK:Syk Oncogene Tumor suppressor gene 114727 ChimerSeq ChiTaRs ChiTaRs TRA2B-KIFC1 TRA2B chr3 185655788 KIFC1 chr6 4854399 Exonic hg19 NA CN257709 Out-of-frame Inter-chr q27.2 114728 ChimerSeq ChiTaRs ChiTaRs NAP1L4-NAP1L4 NAP1L4 chr11 2987444 NAP1L4 chr11 2988418 Exonic hg19 NA BX113409 Out-of-frame Intra-chr 114729 ChimerSeq ChiTaRs ChiTaRs OXSR1-SRP72 OXSR1 chr3 38289311 SRP72 chr4 57338968 Exonic hg19 NA CV357489 Out-of-frame Inter-chr p22.2 q12 114730 ChimerSeq ChiTaRs ChiTaRs AMMECR1-CISH AMMECR1 chrX 109437660 CISH chr3 50645044 Exonic hg19 NA AW438759 Out-of-frame Inter-chr q23 p21.2 114731 ChimerSeq ChiTaRs ChiTaRs GTF2IP1-CHCHD3 GTF2IP1 chr7 74638713 CHCHD3 chr7 132719291 Exonic hg19 NA AK097279 Out-of-frame Intra-chr q11.23 q33 Transcription factor 114732 ChimerSeq ChiTaRs ChiTaRs SLC8A1-RAB6A SLC8A1 chr2 40739616 RAB6A chr11 73388770 Exonic hg19 NA DB253719 Out-of-frame Inter-chr p22.1 q13.4 114733 ChimerSeq ChiTaRs ChiTaRs SMEK2-TAGLN2 SMEK2 chr2 55825590 TAGLN2 chr1 159887905 Exonic hg19 NA AA303189 Out-of-frame Inter-chr q23.2 114734 ChimerSeq ChiTaRs ChiTaRs NEU1-NEU1 NEU1 chr6 3160681 NEU1 chr6 3160664 Exonic hg19 NA BQ301319 Out-of-frame Intra-chr 114735 ChimerSeq ChiTaRs ChiTaRs CELF2-PTPRG CELF2 chr10 11301396 PTPRG chr3 61798818 Exonic hg19 NA AI760279 Out-of-frame Inter-chr p14 p14.2 114736 ChimerSeq ChiTaRs ChiTaRs WHSC1L1-WHSC1L1 WHSC1L1 chr8 38237812 WHSC1L1 chr8 38237715 Exonic hg19 NA BF172269 Out-of-frame Intra-chr p11.23 Tumor suppressor gene p11.23 Tumor suppressor gene 114737 ChimerSeq ChiTaRs ChiTaRs HNRPDL-GPR39 HNRPDL chr4 83348640 GPR39 chr2 133228103 Exonic hg19 NA R18789 Out-of-frame Inter-chr q21.2 114738 ChimerSeq ChiTaRs ChiTaRs CBWD6-KLF6 CBWD6 chr9 69207330 KLF6 chr10 3819954 Exonic hg19 NA T06379 Out-of-frame Inter-chr p11.2 p15.2 Oncogene Tumor suppressor gene Transcription factor 114739 ChimerSeq ChiTaRs ChiTaRs HIST2H2BE-RNF26 HIST2H2BE chr1 149857614 RNF26 chr11 119205939 Exonic hg19 NA BE263739 Out-of-frame Inter-chr q21.2 q23.3 114740 ChimerSeq ChiTaRs ChiTaRs HNRNPH1-TRAP1 HNRNPH1 chr5 179050670 TRAP1 chr16 3728199 Exonic hg19 NA DA379519 Out-of-frame Inter-chr q35.3 p13.3 114741 ChimerSeq ChiTaRs ChiTaRs CAPZB-PDE2A CAPZB chr1 19665940 PDE2A chr11 72323711 Exonic hg19 NA BE924919 Out-of-frame Inter-chr p36.13 q13.4 114742 ChimerSeq ChiTaRs ChiTaRs MTPN-CA12 MTPN chr7 135613459 CA12 chr15 63617236 Exonic hg19 NA BQ325609 Out-of-frame Inter-chr q33 q22.2 114743 ChimerSeq ChiTaRs ChiTaRs WASH1-DEFB125 WASH1 chr9 30876 DEFB125 chr20 67895 Exonic hg19 NA BC048429 Out-of-frame Inter-chr p13 114744 ChimerSeq ChiTaRs ChiTaRs ALG13-GSTM2 ALG13 chrX 110935423 GSTM2 chr1 110220770 Exonic hg19 NA EB387269 Out-of-frame Inter-chr q23 p13.3 114745 ChimerSeq ChiTaRs ChiTaRs EBF1-CAPZA1 EBF1 chr5 158125182 CAPZA1 chr1 113213159 Exonic hg19 NA BI544219 Out-of-frame Inter-chr q33.3 Transcription factor p13.2 114746 ChimerSeq ChiTaRs ChiTaRs NOP16-SH3BGRL3 NOP16 chr5 175815588 SH3BGRL3 chr1 26606607 Exonic hg19 NA BG744339 Out-of-frame Inter-chr q35.2 p36.11 114747 ChimerSeq ChiTaRs ChiTaRs FSTL1-ZNF143 FSTL1 chr3 120113819 ZNF143 chr11 9484561 Exonic hg19 NA AW379989 Out-of-frame Inter-chr q13.33 p15.4 Transcription factor 114748 ChimerSeq ChiTaRs ChiTaRs CLCN3-ASIC4 CLCN3 chr4 170641254 ASIC4 chr2 220383146 Exonic hg19 NA R12599 Out-of-frame Inter-chr q33 q35 114749 ChimerSeq ChiTaRs ChiTaRs GALNT11-GALNT11 GALNT11 chr7 151805342 GALNT11 chr7 151805341 Exonic hg19 NA BE169979 Out-of-frame Intra-chr q36.1 q36.1 114750 ChimerSeq ChiTaRs ChiTaRs AHSG-ALB AHSG chr3 186339075 ALB chr4 74270015 Exonic hg19 NA AI174759 Out-of-frame Inter-chr q27.3 q13.3 114751 ChimerSeq ChiTaRs ChiTaRs PRKRIP1-ANKRD13A PRKRIP1 chr7 102037781 ANKRD13A chr12 110476918 Exonic hg19 NA BI036729 Out-of-frame Inter-chr q22.1 q24.11 114752 ChimerSeq ChiTaRs ChiTaRs HSPB1-HSPB1 HSPB1 chr7 75933602 HSPB1 chr7 75932071 Exonic hg19 NA AI801539 Out-of-frame Intra-chr q11.23 q11.23 114753 ChimerSeq ChiTaRs ChiTaRs RPS24-CLSTN2 RPS24 chr10 79800455 CLSTN2 chr3 139768311 Exonic hg19 NA AI826669 Out-of-frame Inter-chr q22.3 q23 114754 ChimerSeq ChiTaRs ChiTaRs MIR548N-EIF4G1 MIR548N chr2 179484504 EIF4G1 chr3 184046459 Exonic hg19 NA F00479 Out-of-frame Inter-chr p14.2 q27.1 114755 ChimerSeq ChiTaRs ChiTaRs PLOD3-MICA PLOD3 chr7 100852180 MICA chr6 2705825 Exonic hg19 NA BI045639 Out-of-frame Inter-chr q22.1 p21.33 114756 ChimerSeq ChiTaRs ChiTaRs FBXO42-FBXO42 FBXO42 chr1 16622335 FBXO42 chr1 16622722 Exonic hg19 NA BF371859 Out-of-frame Intra-chr p36.13 p36.13 114757 ChimerSeq ChiTaRs ChiTaRs EGLN1-EGLN1 EGLN1 chr1 231499914 EGLN1 chr1 231499902 Exonic hg19 NA CB243269 Out-of-frame Intra-chr q42.2 Tumor suppressor gene q42.2 Tumor suppressor gene 114758 ChimerSeq ChiTaRs ChiTaRs SEC23IP-SEC23IP SEC23IP chr10 121696862 SEC23IP chr10 121683326 Exonic hg19 NA BG742999 Out-of-frame Intra-chr q26.11 q26.11 114759 ChimerSeq ChiTaRs ChiTaRs RPL14-RPL14 RPL14 chr3 40503739 RPL14 chr3 40502898 Exonic hg19 NA AV738739 Out-of-frame Intra-chr p22.1 p22.1 114760 ChimerSeq ChiTaRs ChiTaRs ZNF462-RIMS2 ZNF462 chr9 109694823 RIMS2 chr8 105056395 Exonic hg19 NA BF917369 Out-of-frame Inter-chr q31.2 Transcription factor q22.3 114761 ChimerSeq ChiTaRs ChiTaRs C6orf132-LOC100507246 C6orf132 chr6 42094377 LOC100507246 chr17 74556652 Exonic hg19 NA AI656259 Out-of-frame Inter-chr p21.1 114762 ChimerSeq ChiTaRs ChiTaRs PAX5-PAX5 PAX5 chr9 36902115 PAX5 chr9 36897675 Exonic hg19 NA AW297549 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene Transcription factor p13.2 Oncogene Tumor suppressor gene Transcription factor 114763 ChimerSeq ChiTaRs ChiTaRs PRRC2B-CREB3L1 PRRC2B chr9 134372739 CREB3L1 chr11 46331651 Exonic hg19 NA BF820889 Out-of-frame Inter-chr q34.13 p11.2 Tumor suppressor gene Transcription factor 114764 ChimerSeq ChiTaRs ChiTaRs PTPRC-NIPBL PTPRC chr1 198670154 NIPBL chr5 36998942 Exonic hg19 NA BF871489 Out-of-frame Inter-chr Tumor suppressor gene p13.2 114765 ChimerSeq ChiTaRs ChiTaRs RLF-IREB2 RLF chr1 40649893 IREB2 chr15 78766921 Exonic hg19 NA AW856369 Out-of-frame Inter-chr p34.2 Transcription factor q25.1 114766 ChimerSeq ChiTaRs ChiTaRs ZBTB38-ZBTB38 ZBTB38 chr3 141142572 ZBTB38 chr3 141087624 Exonic hg19 NA CF127199 Out-of-frame Intra-chr q23 Transcription factor q23 Transcription factor 114767 ChimerSeq ChiTaRs ChiTaRs SSR2-SSR2 SSR2 chr1 155979296 SSR2 chr1 155978969 Exonic hg19 NA AA372679 Out-of-frame Intra-chr q22 q22 114768 ChimerSeq ChiTaRs ChiTaRs EHD3-CTNND2 EHD3 chr2 31489837 CTNND2 chr5 11280828 Exonic hg19 NA BF992979 Out-of-frame Inter-chr p23.1 Tumor suppressor gene p15.2 114769 ChimerSeq ChiTaRs ChiTaRs PSMG3-AMACR PSMG3 chr7 1608998 AMACR chr5 34007940 Exonic hg19 NA BE267449 Out-of-frame Inter-chr p22.3 p13.2 114770 ChimerSeq ChiTaRs ChiTaRs ACTG2-ACTG2 ACTG2 chr2 74146695 ACTG2 chr2 74146692 Exonic hg19 NA AA506469 Out-of-frame Intra-chr p13.1 p13.1 114771 ChimerSeq ChiTaRs ChiTaRs CHTOP-CHTOP CHTOP chr1 153610358 CHTOP chr1 153610310 Exonic hg19 NA BE866929 Out-of-frame Intra-chr q21.3 q21.3 114772 ChimerSeq ChiTaRs ChiTaRs PVT1-PVT1 PVT1 chr8 128831402 PVT1 chr8 128835965 Exonic hg19 NA BE170539 Out-of-frame Intra-chr q24.21 q24.21 114773 ChimerSeq ChiTaRs ChiTaRs CDH17-DIP2C CDH17 chr8 95172232 DIP2C chr10 708995 Exonic hg19 NA BQ326459 Out-of-frame Inter-chr q22.1 Tumor suppressor gene p15.3 114774 ChimerSeq ChiTaRs ChiTaRs MIR548N-ZEB1 MIR548N chr2 179439383 ZEB1 chr10 31751841 Exonic hg19 NA AA094699 Out-of-frame Inter-chr p14.2 p11.22 Transcription factor 114775 ChimerSeq ChiTaRs ChiTaRs ORAI2-WHSC1 ORAI2 chr7 102091939 WHSC1 chr4 1913300 Exonic hg19 NA DQ090923 Out-of-frame Inter-chr q22.1 Oncogene 114776 ChimerSeq ChiTaRs ChiTaRs CNTRL-CNTRL CNTRL chr9 123930596 CNTRL chr9 123920353 Exonic hg19 NA BF921649 Out-of-frame Intra-chr q33.2 q33.2 114777 ChimerSeq ChiTaRs ChiTaRs NGFRAP1-SRGAP2 NGFRAP1 chrX 102632530 SRGAP2 chr1 206636822 Exonic hg19 NA T06799 Out-of-frame Inter-chr q32.1 Tumor suppressor gene 114778 ChimerSeq ChiTaRs ChiTaRs PNPT1-PNPT1 PNPT1 chr2 55894211 PNPT1 chr2 55873579 Exonic hg19 NA BQ378709 Out-of-frame Intra-chr p16.1 p16.1 114779 ChimerSeq ChiTaRs ChiTaRs COL3A1-ARHGAP18 COL3A1 chr2 189864615 ARHGAP18 chr6 129922220 Exonic hg19 NA BF328959 Out-of-frame Inter-chr q32.2 q22.33 114780 ChimerSeq ChiTaRs ChiTaRs C1orf151-NBL1-C1orf151-NBL1 C1orf151-NBL1 chr1 19984626 C1orf151-NBL1 chr1 19984225 Exonic hg19 NA AW877859 Out-of-frame Intra-chr 114781 ChimerSeq ChiTaRs ChiTaRs SYNE1-SYNE1 SYNE1 chr6 152469304 SYNE1 chr6 152473159 Exonic hg19 NA BF850739 Out-of-frame Intra-chr q25.2 Oncogene q25.2 Oncogene 114782 ChimerSeq ChiTaRs ChiTaRs FAM171B-FAM171B FAM171B chr2 187628947 FAM171B chr2 187629596 Exonic hg19 NA DT217289 Out-of-frame Intra-chr q32.1 q32.1 114783 ChimerSeq ChiTaRs ChiTaRs LOC728190-GNAS LOC728190 chr10 89086413 GNAS chr20 57470659 Exonic hg19 NA CV809249 Out-of-frame Inter-chr q13.32 Oncogene 114784 ChimerSeq ChiTaRs ChiTaRs ANKS6-SEC62 ANKS6 chr9 101498020 SEC62 chr3 169702915 Exonic hg19 NA BE770019 Out-of-frame Inter-chr q22.33 q26.2 114785 ChimerSeq ChiTaRs ChiTaRs BCAP31-BCAP31 BCAP31 chrX 152966233 BCAP31 chrX 152986375 Exonic hg19 NA BF934379 Out-of-frame Intra-chr q28 q28 114786 ChimerSeq ChiTaRs ChiTaRs ANXA1-MIR548AE2 ANXA1 chr9 75770143 MIR548AE2 chr16 48400529 Exonic hg19 NA BF873709 Out-of-frame Inter-chr q21.13 Tumor suppressor gene q11.2 114787 ChimerSeq ChiTaRs ChiTaRs PRRC2A-RASA4 PRRC2A chr6 2935128 RASA4 chr7 102294126 Exonic hg19 NA AW176439 Out-of-frame Inter-chr q22.1 114788 ChimerSeq ChiTaRs ChiTaRs ZNF800-TANK ZNF800 chr7 127012250 TANK chr2 162061404 Exonic hg19 NA AW812279 Out-of-frame Inter-chr q31.33 Transcription factor q24.2 Tumor suppressor gene 114789 ChimerSeq ChiTaRs ChiTaRs SMC5-XKR6 SMC5 chr9 72969789 XKR6 chr8 10990173 Exonic hg19 NA CB243369 3'UTR-CDS Inter-chr q21.12 p23.1 114790 ChimerSeq ChiTaRs ChiTaRs CCNY-COG3 CCNY chr10 35803003 COG3 chr13 46043576 Exonic hg19 NA DB361739 Out-of-frame Inter-chr p11.21 q14.13 114791 ChimerSeq ChiTaRs ChiTaRs SP100-PHLPP2 SP100 chr2 231293461 PHLPP2 chr16 71717160 Exonic hg19 NA AW885579 Out-of-frame Inter-chr q37.1 Tumor suppressor gene Transcription factor q22.2 Tumor suppressor gene 114792 ChimerSeq ChiTaRs ChiTaRs IDI1-CRTC3 IDI1 chr10 1091515 CRTC3 chr15 91122129 Exonic hg19 NA BE708329 Out-of-frame Inter-chr p15.3 q26.1 114793 ChimerSeq ChiTaRs ChiTaRs MYOT-MYOT MYOT chr5 137222937 MYOT chr5 137211643 Exonic hg19 NA Z19219 Out-of-frame Intra-chr q31.2 q31.2 114794 ChimerSeq ChiTaRs ChiTaRs DHX36-DHX36 DHX36 chr3 154032708 DHX36 chr3 154031544 Exonic hg19 NA AA251139 Out-of-frame Intra-chr 114795 ChimerSeq ChiTaRs ChiTaRs PKN2-FASTKD1 PKN2 chr1 89189213 FASTKD1 chr2 170427450 Exonic hg19 NA AW608179 Out-of-frame Inter-chr p22.2 AGC:PKN q31.1 114796 ChimerSeq ChiTaRs ChiTaRs WDR41-WDR41 WDR41 chr5 76749709 WDR41 chr5 76758945 Exonic hg19 NA BE089339 Out-of-frame Intra-chr q14.1 q14.1 114797 ChimerSeq ChiTaRs ChiTaRs SLC12A8-ZFP36 SLC12A8 chr3 124991033 ZFP36 chr19 39899528 Exonic hg19 NA BF094229 Out-of-frame Inter-chr q21.2 q13.2 Tumor suppressor gene 114798 ChimerSeq ChiTaRs ChiTaRs IVNS1ABP-IVNS1ABP IVNS1ABP chr1 185266962 IVNS1ABP chr1 185276655 Exonic hg19 NA BU619849 Out-of-frame Intra-chr q25.3 q25.3 114799 ChimerSeq ChiTaRs ChiTaRs HBB-TCEANC2 HBB chr11 5248197 TCEANC2 chr1 54554362 Exonic hg19 NA BI030799 Out-of-frame Inter-chr p15.4 p32.3 114800 ChimerSeq ChiTaRs ChiTaRs ZNF711-CREB5 ZNF711 chrX 84527594 CREB5 chr7 28764193 Exonic hg19 NA AU117299 Out-of-frame Inter-chr q21.1 Transcription factor p15.1 Transcription factor 114801 ChimerSeq ChiTaRs ChiTaRs TGS1-SNTG2 TGS1 chr8 56698841 SNTG2 chr2 992480 Exonic hg19 NA CB241959 Out-of-frame Inter-chr q12.1 Tumor suppressor gene 114802 ChimerSeq ChiTaRs ChiTaRs SBF2-SBF2 SBF2 chr11 9854145 SBF2 chr11 9860583 Exonic hg19 NA AU122739 Out-of-frame Intra-chr p15.4 p15.4 114803 ChimerSeq ChiTaRs ChiTaRs SPTAN1-SPTAN1 SPTAN1 chr9 131319497 SPTAN1 chr9 131318869 Exonic hg19 NA DW424339 Out-of-frame Intra-chr q34.11 q34.11 114804 ChimerSeq ChiTaRs ChiTaRs RPL37-UBR5 RPL37 chr5 40832628 UBR5 chr8 103337293 Exonic hg19 NA BF003129 Out-of-frame Inter-chr p13.1 q22.3 Oncogene 114805 ChimerSeq ChiTaRs ChiTaRs MCEE-METTL8 MCEE chr2 71357359 METTL8 chr2 172180339 Exonic hg19 NA DR980649 Out-of-frame Intra-chr p13.3 q31.1 114806 ChimerSeq ChiTaRs ChiTaRs APEX2-APEX2 APEX2 chrX 55033936 APEX2 chrX 55033951 Exonic hg19 NA BF761699 Out-of-frame Intra-chr p11.21 p11.21 114807 ChimerSeq ChiTaRs ChiTaRs SH3GL2-SH3GL2 SH3GL2 chr9 17796337 SH3GL2 chr9 17796531 Exonic hg19 NA BF934809 Out-of-frame Intra-chr p22.2 p22.2 114808 ChimerSeq ChiTaRs ChiTaRs HMGB2-CAMK1D HMGB2 chr4 174253195 CAMK1D chr10 12834807 Exonic hg19 NA BF062889 Out-of-frame Inter-chr q34.1 p13 114809 ChimerSeq ChiTaRs ChiTaRs UQCRC1-RPL13AP20 UQCRC1 chr3 48647050 RPL13AP20 chr12 13028974 Exonic hg19 NA CN276009 Out-of-frame Inter-chr p21.31 p13.1 114810 ChimerSeq ChiTaRs ChiTaRs TYSND1-ANKRD11 TYSND1 chr10 71906403 ANKRD11 chr16 89365287 Exonic hg19 NA BC088729 Out-of-frame Inter-chr q22.1 q24.3 114811 ChimerSeq ChiTaRs ChiTaRs BRD3-BRD3 BRD3 chr9 136898378 BRD3 chr9 136898774 Exonic hg19 NA BX116849 Out-of-frame Intra-chr q34.2 Atypical:BRD Oncogene q34.2 Atypical:BRD Oncogene 114812 ChimerSeq ChiTaRs ChiTaRs CAMK1D-CAMK1D CAMK1D chr10 12703735 CAMK1D chr10 12692915 Exonic hg19 NA AU185429 Out-of-frame Intra-chr p13 p13 114813 ChimerSeq ChiTaRs ChiTaRs MLL5-DYNC1I1 MLL5 chr7 104654982 DYNC1I1 chr7 95499191 Exonic hg19 NA DA518309 5'UTR-CDS Intra-chr q21.3 114814 ChimerSeq ChiTaRs ChiTaRs TRA2A-TRA2A TRA2A chr7 23563520 TRA2A chr7 23563515 Exonic hg19 NA BF356549 Out-of-frame Intra-chr p15.3 p15.3 114815 ChimerSeq ChiTaRs ChiTaRs PINK1-LRRC37A2 PINK1 chr1 20961662 LRRC37A2 chr17 44594073 Exonic hg19 NA AF119889 Out-of-frame Inter-chr p36.12 Other:NKF2 114816 ChimerSeq ChiTaRs ChiTaRs TMEM68-ERCC3 TMEM68 chr8 56652299 ERCC3 chr2 128050186 Exonic hg19 NA AI653149 Out-of-frame Inter-chr q12.1 q14.3 Oncogene 114817 ChimerSeq ChiTaRs ChiTaRs DDX50-SCRN1 DDX50 chr10 70706458 SCRN1 chr7 29960064 Exonic hg19 NA BE078269 Out-of-frame Inter-chr q22.1 p14.3 114818 ChimerSeq ChiTaRs ChiTaRs ZPBP-LUM ZPBP chr7 50087275 LUM chr12 91497325 Exonic hg19 NA AI049509 Out-of-frame Inter-chr p12.2 q21.33 114819 ChimerSeq ChiTaRs ChiTaRs TRIM38-KIAA0232 TRIM38 chr6 25966915 KIAA0232 chr4 6870207 Exonic hg19 NA BF895949 Out-of-frame Inter-chr p22.2 p16.1 114820 ChimerSeq ChiTaRs ChiTaRs SLC27A4-CDCA4 SLC27A4 chr9 131105053 CDCA4 chr14 105476273 Exonic hg19 NA CB157759 Out-of-frame Inter-chr q34.11 q32.33 114821 ChimerSeq ChiTaRs ChiTaRs SPRR1B-UBASH3B SPRR1B chr1 153004905 UBASH3B chr11 122530719 Exonic hg19 NA BF354149 Out-of-frame Inter-chr q21.3 q24.1 114822 ChimerSeq ChiTaRs ChiTaRs HK1-HK1 HK1 chr10 71144237 HK1 chr10 71144584 Exonic hg19 NA W28999 In-Frame Intra-chr q22.1 q22.1 114823 ChimerSeq ChiTaRs ChiTaRs TATDN2-TATDN2 TATDN2 chr3 10321958 TATDN2 chr3 10322009 Exonic hg19 NA BI026139 Out-of-frame Intra-chr p25.3 p25.3 114824 ChimerSeq ChiTaRs ChiTaRs SHROOM3-ASAH1 SHROOM3 chr4 77547922 ASAH1 chr8 17941507 Exonic hg19 NA DB172989 Out-of-frame Inter-chr q21.1 p22 114825 ChimerSeq ChiTaRs ChiTaRs PLEC-ERBB2 PLEC chr8 145012856 ERBB2 chr17 37864454 Exonic hg19 NA BE696969 Out-of-frame Inter-chr q24.3 q12 Oncogene 114826 ChimerSeq ChiTaRs ChiTaRs SLC25A26-RNF220 SLC25A26 chr3 66428421 RNF220 chr1 45108206 Exonic hg19 NA BF933539 Out-of-frame Inter-chr p34.1 114827 ChimerSeq ChiTaRs ChiTaRs RAPGEF5-SDK2 RAPGEF5 chr7 22358146 SDK2 chr17 71491908 Exonic hg19 NA CV346479 Out-of-frame Inter-chr p15.3 q25.1 114828 ChimerSeq ChiTaRs ChiTaRs USP11-USP11 USP11 chrX 47106772 USP11 chrX 47104465 Exonic hg19 NA CD517199 Out-of-frame Intra-chr p11.3 p11.3 114829 ChimerSeq ChiTaRs ChiTaRs FAM107B-GCNT7 FAM107B chr10 14641776 GCNT7 chr20 55099683 Exonic hg19 NA BQ375049 Out-of-frame Inter-chr p13 q13.31 114830 ChimerSeq ChiTaRs ChiTaRs LGR4-TRIM58 LGR4 chr11 27388060 TRIM58 chr1 248043259 Exonic hg19 NA H95089 Out-of-frame Inter-chr p14.1 q44 114831 ChimerSeq ChiTaRs ChiTaRs UHMK1-CAP1 UHMK1 chr1 162492994 CAP1 chr1 40525823 Exonic hg19 NA CO404889 Out-of-frame Intra-chr q23.3 p34.2 114832 ChimerSeq ChiTaRs ChiTaRs RAMP3-RAMP3 RAMP3 chr7 45223849 RAMP3 chr7 45223563 Exonic hg19 NA BE044279 Out-of-frame Intra-chr p13 p13 114833 ChimerSeq ChiTaRs ChiTaRs SYT2-MYO7A SYT2 chr1 202635050 MYO7A chr11 76901751 Exonic hg19 NA AI150069 Out-of-frame Inter-chr q32.1 q13.5 114834 ChimerSeq ChiTaRs ChiTaRs MAGI1-JUN MAGI1 chr3 65783586 JUN chr1 59247697 Exonic hg19 NA BE770729 Out-of-frame Inter-chr Oncogene p32.1 Oncogene Transcription factor 114835 ChimerSeq ChiTaRs ChiTaRs IQCG-ZNF391 IQCG chr3 197682679 ZNF391 chr6 27358311 Exonic hg19 NA DB330039 Out-of-frame Inter-chr q29 p22.1 Transcription factor 114836 ChimerSeq ChiTaRs ChiTaRs STRBP-STRBP STRBP chr9 125887400 STRBP chr9 125887275 Exonic hg19 NA BM479789 Out-of-frame Intra-chr q33.3 q33.3 114837 ChimerSeq ChiTaRs ChiTaRs HADHB-AHSA1 HADHB chr2 26512968 AHSA1 chr14 77928517 Exonic hg19 NA AI004639 Out-of-frame Inter-chr p23.3 q24.3 114838 ChimerSeq ChiTaRs ChiTaRs HDLBP-SNX33 HDLBP chr2 242168749 SNX33 chr15 75942845 Exonic hg19 NA AW197079 Out-of-frame Inter-chr q37.3 q24.2 114839 ChimerSeq ChiTaRs ChiTaRs MTMR1-ZC3HC1 MTMR1 chrX 149881065 ZC3HC1 chr7 129677553 Exonic hg19 NA BF365539 Out-of-frame Inter-chr q28 q32.2 114840 ChimerSeq ChiTaRs ChiTaRs PDLIM5-PDLIM5 PDLIM5 chr4 95507595 PDLIM5 chr4 95494502 Exonic hg19 NA BF820649 In-Frame Intra-chr q22.3 q22.3 114841 ChimerSeq ChiTaRs ChiTaRs ESRP1-ESRP1 ESRP1 chr8 95696580 ESRP1 chr8 95700630 Exonic hg19 NA AW377449 Out-of-frame Intra-chr q22.1 Tumor suppressor gene q22.1 Tumor suppressor gene 114842 ChimerSeq ChiTaRs ChiTaRs CSPP1-CSPP1 CSPP1 chr8 68076033 CSPP1 chr8 68076679 Exonic hg19 NA BU608669 Out-of-frame Intra-chr q13.1 q13.1 114843 ChimerSeq ChiTaRs ChiTaRs LARP1B-TAF7 LARP1B chr4 129087763 TAF7 chr5 140699164 Exonic hg19 NA BE185469 Out-of-frame Inter-chr q28.2 q31.3 114844 ChimerSeq ChiTaRs ChiTaRs S100A16-PDE4B S100A16 chr1 153580145 PDE4B chr1 66836309 Exonic hg19 NA BF359219 Out-of-frame Intra-chr q21.3 p31.3 114845 ChimerSeq ChiTaRs ChiTaRs IMPG2-IMPG2 IMPG2 chr3 101023162 IMPG2 chr3 100972540 Exonic hg19 NA AI739559 Out-of-frame Intra-chr q12.3 q12.3 114846 ChimerSeq ChiTaRs ChiTaRs MSN-CAB39 MSN chrX 64960928 CAB39 chr2 231685368 Exonic hg19 NA AA234749 Out-of-frame Inter-chr q12 q37.1 114847 ChimerSeq ChiTaRs ChiTaRs C1orf174-PPP1CB C1orf174 chr1 3806014 PPP1CB chr2 29011954 Exonic hg19 NA AI627549 Out-of-frame Inter-chr p36.32 p23.2 114848 ChimerSeq ChiTaRs ChiTaRs CLU-CLU CLU chr8 27466547 CLU chr8 27462611 Exonic hg19 NA BI016129 Out-of-frame Intra-chr p21.1 Tumor suppressor gene p21.1 Tumor suppressor gene 114849 ChimerSeq ChiTaRs ChiTaRs RBP4-ZDHHC17 RBP4 chr10 95360488 ZDHHC17 chr12 77230681 Exonic hg19 NA AI444579 Out-of-frame Inter-chr q23.33 q21.2 114850 ChimerSeq ChiTaRs ChiTaRs SMARCAD1-SMARCAD1 SMARCAD1 chr4 95183952 SMARCAD1 chr4 95183946 Exonic hg19 NA AA828699 Out-of-frame Intra-chr q22.3 q22.3 114851 ChimerSeq ChiTaRs ChiTaRs MAP1B-MAP1B MAP1B chr5 71491346 MAP1B chr5 71492402 Exonic hg19 NA BE855959 Out-of-frame Intra-chr q13.2 q13.2 114852 ChimerSeq ChiTaRs ChiTaRs CRBN-SFMBT1 CRBN chr3 3209347 SFMBT1 chr3 52938288 Exonic hg19 NA BQ306819 Out-of-frame Intra-chr p26.2 Oncogene p21.1 114853 ChimerSeq ChiTaRs ChiTaRs TTC31-OSBPL2 TTC31 chr2 74717820 OSBPL2 chr20 60870674 Exonic hg19 NA BE816019 Out-of-frame Inter-chr p13.1 q13.33 114854 ChimerSeq ChiTaRs ChiTaRs DAGLA-DAGLA DAGLA chr11 61513568 DAGLA chr11 61514292 Exonic hg19 NA CB409589 Out-of-frame Intra-chr q12.2 q12.2 114855 ChimerSeq ChiTaRs ChiTaRs PDIA3P-TMEM245 PDIA3P chr1 146651174 TMEM245 chr9 111877642 Exonic hg19 NA AW868509 Out-of-frame Inter-chr q31.3 114856 ChimerSeq ChiTaRs ChiTaRs MED23-MED23 MED23 chr6 131910657 MED23 chr6 131908205 Exonic hg19 NA BQ223279 Out-of-frame Intra-chr q23.2 q23.2 114857 ChimerSeq ChiTaRs ChiTaRs SH3D19-KIAA1217 SH3D19 chr4 152042634 KIAA1217 chr10 24553139 Exonic hg19 NA AW813939 Out-of-frame Inter-chr q31.3 p12.2 114858 ChimerSeq ChiTaRs ChiTaRs UBE2E3-SREBF1 UBE2E3 chr2 181881928 SREBF1 chr17 17722911 Exonic hg19 NA DA092279 Out-of-frame Inter-chr q31.3 p11.2 Transcription factor 114859 ChimerSeq ChiTaRs ChiTaRs SPRR1B-ARL13B SPRR1B chr1 153005309 ARL13B chr3 93722588 Exonic hg19 NA BE181429 Out-of-frame Inter-chr q21.3 q11.1 114860 ChimerSeq ChiTaRs ChiTaRs SERGEF-TERF2IP SERGEF chr11 17931609 TERF2IP chr16 75690531 Exonic hg19 NA BQ340299 Out-of-frame Inter-chr p15.1 q23.1 114861 ChimerSeq ChiTaRs ChiTaRs IGFBP5-YAF2 IGFBP5 chr2 217537414 YAF2 chr12 42554154 Exonic hg19 NA U72209 Out-of-frame Inter-chr q35 Tumor suppressor gene q12 114862 ChimerSeq ChiTaRs ChiTaRs PFN2-HLCS PFN2 chr3 149685233 HLCS chr21 38268133 Exonic hg19 NA BF366959 Out-of-frame Inter-chr q25.1 q22.13 114863 ChimerSeq ChiTaRs ChiTaRs CCDC88A-CCDC88A CCDC88A chr2 55562085 CCDC88A chr2 55563893 Exonic hg19 NA AW976179 Out-of-frame Intra-chr p16.1 p16.1 114864 ChimerSeq ChiTaRs ChiTaRs RPS23-CCDC80 RPS23 chr5 81571951 CCDC80 chr3 112358666 Exonic hg19 NA CA429429 Out-of-frame Inter-chr q14.2 q13.2 114865 ChimerSeq ChiTaRs ChiTaRs PGM1-PGM1 PGM1 chr1 64125346 PGM1 chr1 64125419 Exonic hg19 NA AI798979 Out-of-frame Intra-chr p31.3 p31.3 114866 ChimerSeq ChiTaRs ChiTaRs ELMO1-ELMO1 ELMO1 chr7 37258925 ELMO1 chr7 37136283 Exonic hg19 NA DA840149 Out-of-frame Intra-chr p14.1 p14.1 114867 ChimerSeq ChiTaRs ChiTaRs PNISR-PNISR PNISR chr6 99857111 PNISR chr6 99857146 Exonic hg19 NA BG223429 Out-of-frame Intra-chr q16.2 q16.2 114868 ChimerSeq ChiTaRs ChiTaRs ABHD16A-ABCD4 ABHD16A chr6 2985673 ABCD4 chr14 74761823 Exonic hg19 NA BF057519 Out-of-frame Inter-chr q24.3 114869 ChimerSeq ChiTaRs ChiTaRs BCCIP-BCCIP BCCIP chr10 127520148 BCCIP chr10 127515158 Exonic hg19 NA AA226439 Out-of-frame Intra-chr q26.2 q26.2 114870 ChimerSeq ChiTaRs ChiTaRs RAB23-RAB23 RAB23 chr6 57075244 RAB23 chr6 57058640 Exonic hg19 NA BE835379 Out-of-frame Intra-chr p11.2 p11.2 114871 ChimerSeq ChiTaRs ChiTaRs NDP-SLC25A46 NDP chrX 43832897 SLC25A46 chr5 110075056 Exonic hg19 NA BI601719 Out-of-frame Inter-chr p11.3 q22.1 114872 ChimerSeq ChiTaRs ChiTaRs PIM2-STOML2 PIM2 chrX 48770524 STOML2 chr9 35099915 Exonic hg19 NA BM693019 Out-of-frame Inter-chr p11.23 CAMK:PIM p13.3 114873 ChimerSeq ChiTaRs ChiTaRs EPCAM-ADAM9 EPCAM chr2 47614014 ADAM9 chr8 38858368 Exonic hg19 NA BF826309 Out-of-frame Inter-chr p21 114874 ChimerSeq ChiTaRs ChiTaRs CDC42SE1-C1orf56 CDC42SE1 chr1 151024167 C1orf56 chr1 151023696 Exonic hg19 NA BU564669 Out-of-frame Intra-chr q21.3 q21.3 114875 ChimerSeq ChiTaRs ChiTaRs UBE2D2-UBE2D2 UBE2D2 chr5 138941991 UBE2D2 chr5 138941352 Exonic hg19 NA BQ186099 Out-of-frame Intra-chr q31.2 q31.2 114876 ChimerSeq ChiTaRs ChiTaRs TIAL1-DKK3 TIAL1 chr10 121335242 DKK3 chr11 12023847 Exonic hg19 NA AI394169 Out-of-frame Inter-chr q26.11 p15.3 Tumor suppressor gene 114877 ChimerSeq ChiTaRs ChiTaRs HNRNPUL2-YY1AP1 HNRNPUL2 chr11 62482596 YY1AP1 chr1 155649260 Exonic hg19 NA AW249049 Out-of-frame Inter-chr q12.3 q22 114878 ChimerSeq ChiTaRs ChiTaRs LOC100507266-ZNF705A LOC100507266 chr4 4613572 ZNF705A chr12 8325150 Exonic hg19 NA AK131339 Out-of-frame Inter-chr p13.31 Transcription factor 114879 ChimerSeq ChiTaRs ChiTaRs TNRC18-TNRC18 TNRC18 chr7 5352260 TNRC18 chr7 5391480 Exonic hg19 NA CD656499 Out-of-frame Intra-chr p22.1 p22.1 114880 ChimerSeq ChiTaRs ChiTaRs CBLB-CBLB CBLB chr3 105377842 CBLB chr3 105377920 Exonic hg19 NA BE827549 Out-of-frame Intra-chr q13.11 q13.11 114881 ChimerSeq ChiTaRs ChiTaRs DMD-DMD DMD chrX 31254525 DMD chrX 31255188 Exonic hg19 NA BQ889789 Out-of-frame Intra-chr p21.1 Tumor suppressor gene p21.1 Tumor suppressor gene 114882 ChimerSeq ChiTaRs ChiTaRs MTX2-KIAA1715 MTX2 chr2 177134397 KIAA1715 chr2 176803066 Exonic hg19 NA BX950959 Out-of-frame Intra-chr q31.1 114883 ChimerSeq ChiTaRs ChiTaRs RGS5-MALAT1 RGS5 chr1 163151237 MALAT1 chr11 65266554 Exonic hg19 NA BF680089 Out-of-frame Inter-chr q23.3 q13.1 114884 ChimerSeq ChiTaRs ChiTaRs CAMK2A-GTF2B CAMK2A chr5 149605906 GTF2B chr1 89341631 Exonic hg19 NA AW838949 Out-of-frame Inter-chr q32 p22.2 Transcription factor 114885 ChimerSeq ChiTaRs ChiTaRs LPP-UBE2R2 LPP chr3 187881342 UBE2R2 chr9 33859033 Exonic hg19 NA BF909239 Out-of-frame Inter-chr q27.3 Oncogene p13.3 114886 ChimerSeq ChiTaRs ChiTaRs SNX10-SEMA4A SNX10 chr7 26332580 SEMA4A chr1 156123451 Exonic hg19 NA DA982529 Out-of-frame Inter-chr p15.2 q22 114887 ChimerSeq ChiTaRs ChiTaRs PUS10-LINC00340 PUS10 chr2 61240371 LINC00340 chr6 21940138 Exonic hg19 NA BE904489 Out-of-frame Inter-chr p15 114888 ChimerSeq ChiTaRs ChiTaRs THSD7B-NCOA2 THSD7B chr2 137875816 NCOA2 chr8 71218444 Exonic hg19 NA BE149299 Out-of-frame Inter-chr q22.1 q13.3 Oncogene Transcription factor 114889 ChimerSeq ChiTaRs ChiTaRs SLC25A43-SLC25A43 SLC25A43 chrX 118556516 SLC25A43 chrX 118557514 Exonic hg19 NA BE143569 Out-of-frame Intra-chr q24 q24 114890 ChimerSeq ChiTaRs ChiTaRs NDUFA10-NDUFA10 NDUFA10 chr2 240900330 NDUFA10 chr2 240900328 Exonic hg19 NA AA088569 Out-of-frame Intra-chr 114891 ChimerSeq ChiTaRs ChiTaRs USP4-NEMF USP4 chr3 49321802 NEMF chr14 50085652 Exonic hg19 NA BF878159 Out-of-frame Inter-chr p21.31 q21.3 114892 ChimerSeq ChiTaRs ChiTaRs ANXA5-USP48 ANXA5 chr4 122593747 USP48 chr1 22028010 Exonic hg19 NA BF381089 Out-of-frame Inter-chr q27 p36.12 114893 ChimerSeq ChiTaRs ChiTaRs NUP188-NUP188 NUP188 chr9 131769325 NUP188 chr9 131769308 Exonic hg19 NA BG397339 Out-of-frame Intra-chr q34.11 q34.11 114894 ChimerSeq ChiTaRs ChiTaRs HIST1H1E-EEF1A1 HIST1H1E chr6 26157342 EEF1A1 chr6 74229161 Exonic hg19 NA BM827989 Out-of-frame Intra-chr p22.2 q13 Tumor suppressor gene 114895 ChimerSeq ChiTaRs ChiTaRs TACC2-TACC2 TACC2 chr10 123799701 TACC2 chr10 123799809 Exonic hg19 NA BF994569 Out-of-frame Intra-chr q26.13 q26.13 114896 ChimerSeq ChiTaRs ChiTaRs C1orf116-C1orf116 C1orf116 chr1 207198403 C1orf116 chr1 207195013 Exonic hg19 NA BC018959 Out-of-frame Intra-chr q32.1 q32.1 114897 ChimerSeq ChiTaRs ChiTaRs ZMYND11-ZFAND4 ZMYND11 chr10 226068 ZFAND4 chr10 46135388 Exonic hg19 NA DB487719 In-Frame Intra-chr p15.3 Tumor suppressor gene q11.22 KB 114898 ChimerSeq ChiTaRs ChiTaRs DEK-DEK DEK chr6 18258638 DEK chr6 18236683 Exonic hg19 NA L44569 Out-of-frame Intra-chr p22.3 Oncogene p22.3 Oncogene 114899 ChimerSeq ChiTaRs ChiTaRs S100A10-CTSZ S100A10 chr1 151955741 CTSZ chr20 57570385 Exonic hg19 NA BF690529 Out-of-frame Inter-chr q21.3 q13.32 114900 ChimerSeq ChiTaRs ChiTaRs MYLK-MYLK MYLK chr3 123386034 MYLK chr3 123401122 Exonic hg19 NA BG945379 In-Frame Intra-chr q21.1 q21.1 114901 ChimerSeq ChiTaRs ChiTaRs C10orf71-C10orf71 C10orf71 chr10 50525032 C10orf71 chr10 50524992 Exonic hg19 NA BF825259 Out-of-frame Intra-chr q11.23 q11.23 114902 ChimerSeq ChiTaRs ChiTaRs PRICKLE4-PRICKLE4 PRICKLE4 chr6 41757389 PRICKLE4 chr6 41757304 Exonic hg19 NA AI133669 Out-of-frame Intra-chr p21.1 p21.1 114903 ChimerSeq ChiTaRs ChiTaRs HSF1-HSF1 HSF1 chr8 145515410 HSF1 chr8 145515468 Exonic hg19 NA BE671029 Out-of-frame Intra-chr q24.3 Transcription factor q24.3 Transcription factor 114904 ChimerSeq ChiTaRs ChiTaRs TCP11L1-TCP11L1 TCP11L1 chr11 33080094 TCP11L1 chr11 33099000 Exonic hg19 NA CA952479 Out-of-frame Intra-chr p13 p13 114905 ChimerSeq ChiTaRs ChiTaRs AHNAK-FBXL17 AHNAK chr11 62283641 FBXL17 chr5 107504855 Exonic hg19 NA AA535089 Out-of-frame Inter-chr q12.3 Tumor suppressor gene q21.3 114906 ChimerSeq ChiTaRs ChiTaRs SLC25A13-SLC25A13 SLC25A13 chr7 95786868 SLC25A13 chr7 95786152 Exonic hg19 NA BE072029 Out-of-frame Intra-chr q21.3 q21.3 114907 ChimerSeq ChiTaRs ChiTaRs ZNF496-ZNF496 ZNF496 chr1 247477463 ZNF496 chr1 247478605 Exonic hg19 NA BX117429 Out-of-frame Intra-chr q44 Transcription factor q44 Transcription factor 114908 ChimerSeq ChiTaRs ChiTaRs SLC44A1-SLC44A1 SLC44A1 chr9 108152591 SLC44A1 chr9 108153184 Exonic hg19 NA C02459 Out-of-frame Intra-chr q31.1 q31.1 114909 ChimerSeq ChiTaRs ChiTaRs RRP36-RRP36 RRP36 chr6 42997246 RRP36 chr6 42997245 Exonic hg19 NA AW973729 Out-of-frame Intra-chr p21.1 p21.1 114910 ChimerSeq ChiTaRs ChiTaRs XPO7-XPO7 XPO7 chr8 21832285 XPO7 chr8 21833875 Exonic hg19 NA BQ359489 Out-of-frame Intra-chr p21.3 p21.3 114911 ChimerSeq ChiTaRs ChiTaRs BAI3-TNIK BAI3 chr6 69733654 TNIK chr3 171002756 Exonic hg19 NA AW897729 Out-of-frame Inter-chr q26.31 STE:STE20 114912 ChimerSeq ChiTaRs ChiTaRs PCYOX1L-PCYOX1L PCYOX1L chr5 148745405 PCYOX1L chr5 148745485 Exonic hg19 NA BF847639 Out-of-frame Intra-chr q32 q32 114913 ChimerSeq ChiTaRs ChiTaRs RPL22-DLC1 RPL22 chr1 6245697 DLC1 chr8 12940882 Exonic hg19 NA CR738829 Out-of-frame Inter-chr p36.31 p22 Tumor suppressor gene 114914 ChimerSeq ChiTaRs ChiTaRs CDR1-AIF1L CDR1 chrX 139866784 AIF1L chr9 133971918 Exonic hg19 NA DA389009 Out-of-frame Inter-chr q27.1 q34.12 114915 ChimerSeq ChiTaRs ChiTaRs LARP1-LARP1 LARP1 chr5 154196125 LARP1 chr5 154194531 Exonic hg19 NA AK057839 Out-of-frame Intra-chr q33.2 q33.2 114916 ChimerSeq ChiTaRs ChiTaRs CLTA-ATP9A CLTA chr9 36211930 ATP9A chr20 50222895 Exonic hg19 NA BF854279 Out-of-frame Inter-chr p13.3 q13.2 114917 ChimerSeq ChiTaRs ChiTaRs HDLBP-MAVS HDLBP chr2 242179072 MAVS chr20 3856269 Exonic hg19 NA BF928759 Out-of-frame Inter-chr q37.3 p13 114918 ChimerSeq ChiTaRs ChiTaRs AKNAD1-ITGA5 AKNAD1 chr1 109460693 ITGA5 chr12 54796070 Exonic hg19 NA AA367789 Out-of-frame Inter-chr p13.3 q13.13 Tumor suppressor gene 114919 ChimerSeq ChiTaRs ChiTaRs HS2ST1-SSX2IP HS2ST1 chr1 87512716 SSX2IP chr1 85111955 Exonic hg19 NA BF223279 Out-of-frame Intra-chr p22.3 p22.3 114920 ChimerSeq ChiTaRs ChiTaRs HMGCS1-HMGCS1 HMGCS1 chr5 43290175 HMGCS1 chr5 43289500 Exonic hg19 NA BG290679 Out-of-frame Intra-chr p12 p12 114921 ChimerSeq ChiTaRs ChiTaRs BNC2-ARHGAP44 BNC2 chr9 16410473 ARHGAP44 chr17 12893998 Exonic hg19 NA BI012359 Out-of-frame Inter-chr p22.2 Transcription factor p12 114922 ChimerSeq ChiTaRs ChiTaRs PRRC2A-AMFR PRRC2A chr6 2982781 AMFR chr16 56395779 Exonic hg19 NA BF870809 Out-of-frame Inter-chr q13 114923 ChimerSeq ChiTaRs ChiTaRs ATP13A3-ATP13A3 ATP13A3 chr3 194124835 ATP13A3 chr3 194124216 Exonic hg19 NA BE896449 Out-of-frame Intra-chr q29 q29 114924 ChimerSeq ChiTaRs ChiTaRs LPCAT1-ENTPD7 LPCAT1 chr5 1461599 ENTPD7 chr10 101468342 Exonic hg19 NA DB311369 Out-of-frame Inter-chr q24.2 114925 ChimerSeq ChiTaRs ChiTaRs RASGRP3-SECTM1 RASGRP3 chr2 33757736 SECTM1 chr17 80279843 Exonic hg19 NA BE184039 Out-of-frame Inter-chr p22.3 q25.3 114926 ChimerSeq ChiTaRs ChiTaRs SHH-TSPAN14 SHH chr7 155599436 TSPAN14 chr10 82278509 Exonic hg19 NA BF829979 Out-of-frame Inter-chr q36.3 q23.1 114927 ChimerSeq ChiTaRs ChiTaRs HOOK3-HOOK3 HOOK3 chr8 42877232 HOOK3 chr8 42877792 Exonic hg19 NA AI365359 Out-of-frame Intra-chr p11.21 Oncogene p11.21 Oncogene 114928 ChimerSeq ChiTaRs ChiTaRs NCOA2-NCOA2 NCOA2 chr8 71092293 NCOA2 chr8 71091671 Exonic hg19 NA BF811949 Out-of-frame Intra-chr q13.3 Oncogene Transcription factor q13.3 Oncogene Transcription factor 114929 ChimerSeq ChiTaRs ChiTaRs NPAS2-NPAS2 NPAS2 chr2 101486715 NPAS2 chr2 101493443 Exonic hg19 NA BQ365509 Out-of-frame Intra-chr q11.2 Tumor suppressor gene Transcription factor q11.2 Tumor suppressor gene Transcription factor 114930 ChimerSeq ChiTaRs ChiTaRs WBP5-WBP5 WBP5 chrX 102612850 WBP5 chrX 102612024 Exonic hg19 NA BE147799 Out-of-frame Intra-chr 114931 ChimerSeq ChiTaRs ChiTaRs HEG1-GNAS HEG1 chr3 124756997 GNAS chr20 57484473 Exonic hg19 NA BF087649 Out-of-frame Inter-chr q21.2 q13.32 Oncogene 114932 ChimerSeq ChiTaRs ChiTaRs SRSF11-AFF1 SRSF11 chr1 70714562 AFF1 chr4 87889674 Exonic hg19 NA BF369269 Out-of-frame Inter-chr p31.1 q21.3 Oncogene 114933 ChimerSeq ChiTaRs ChiTaRs ASH1L-ZNRF3 ASH1L chr1 155352215 ZNRF3 chr22 29386506 Exonic hg19 NA BF093509 Out-of-frame Inter-chr q22 Transcription factor q12.1 114934 ChimerSeq ChiTaRs ChiTaRs RPS6KA2-RPS6KA2 RPS6KA2 chr6 166843955 RPS6KA2 chr6 166843977 Exonic hg19 NA BI011349 Out-of-frame Intra-chr q27 Oncogene Tumor suppressor gene q27 Oncogene Tumor suppressor gene 114935 ChimerSeq ChiTaRs ChiTaRs ATP2C1-ATP2C1 ATP2C1 chr3 130571328 ATP2C1 chr3 130571299 Exonic hg19 NA CV320129 Out-of-frame Intra-chr q22.1 q22.1 114936 ChimerSeq ChiTaRs ChiTaRs COX20-COX20 COX20 chr1 245005206 COX20 chr1 245005846 Exonic hg19 NA DW440459 Out-of-frame Intra-chr q44 q44 114937 ChimerSeq ChiTaRs ChiTaRs GBX1-COL4A6 GBX1 chr7 150846148 COL4A6 chrX 107666031 Exonic hg19 NA CR747029 Out-of-frame Inter-chr q36.1 Transcription factor q22.3 114938 ChimerSeq ChiTaRs ChiTaRs FAM20B-GAS2L3 FAM20B chr1 178998030 GAS2L3 chr12 101017929 Exonic hg19 NA DN913449 Out-of-frame Inter-chr q25.2 q23.1 114939 ChimerSeq ChiTaRs ChiTaRs MCM7-MCM7 MCM7 chr7 99695889 MCM7 chr7 99695872 Exonic hg19 NA T12299 Out-of-frame Intra-chr q22.1 q22.1 114940 ChimerSeq ChiTaRs ChiTaRs AFF3-RTN4 AFF3 chr2 100163863 RTN4 chr2 55252550 Exonic hg19 NA T06959 Out-of-frame Intra-chr q11.2 Oncogene p16.1 Tumor suppressor gene 114941 ChimerSeq ChiTaRs ChiTaRs C10orf12-BCAR3 C10orf12 chr10 98744410 BCAR3 chr1 94070572 Exonic hg19 NA BF992779 Out-of-frame Inter-chr p22.1 114942 ChimerSeq ChiTaRs ChiTaRs HCFC1-HCFC1 HCFC1 chrX 153215736 HCFC1 chrX 153214565 Exonic hg19 NA BQ232509 Out-of-frame Intra-chr q28 q28 114943 ChimerSeq ChiTaRs ChiTaRs MIR29B2-CD37 MIR29B2 chr1 207996048 CD37 chr19 49843630 Exonic hg19 NA AK092969 Out-of-frame Inter-chr q32.2 q13.33 114944 ChimerSeq ChiTaRs ChiTaRs SLAMF1-KIF26B SLAMF1 chr1 160606061 KIF26B chr1 245583352 Exonic hg19 NA U21469 Out-of-frame Intra-chr q23.3 114945 ChimerSeq ChiTaRs ChiTaRs MAOA-MAOA MAOA chrX 43606064 MAOA chrX 43605751 Exonic hg19 NA CB242049 Out-of-frame Intra-chr p11.3 p11.3 114946 ChimerSeq ChiTaRs ChiTaRs TGFBI-SH3PXD2A TGFBI chr5 135394881 SH3PXD2A chr10 105402306 Exonic hg19 NA AA367699 Out-of-frame Inter-chr q31.1 Tumor suppressor gene q24.33 114947 ChimerSeq ChiTaRs ChiTaRs ZDHHC9-ZDHHC9 ZDHHC9 chrX 128939944 ZDHHC9 chrX 128938925 Exonic hg19 NA BF814719 Out-of-frame Intra-chr q26.1 q26.1 114948 ChimerSeq ChiTaRs ChiTaRs REV1-EIF5 REV1 chr2 100021011 EIF5 chr14 103804688 Exonic hg19 NA BM833559 Out-of-frame Inter-chr q11.2 q32.32 114949 ChimerSeq ChiTaRs ChiTaRs ROBO2-ZFP1 ROBO2 chr3 77198182 ZFP1 chr16 75185016 Exonic hg19 NA BM720689 Out-of-frame Inter-chr p12.3 q23.1 Transcription factor 114950 ChimerSeq ChiTaRs ChiTaRs WDR1-WDR1 WDR1 chr4 10099515 WDR1 chr4 10089393 Exonic hg19 NA BF766339 Out-of-frame Intra-chr p16.1 p16.1 114951 ChimerSeq ChiTaRs ChiTaRs AGFG1-SERPINE1 AGFG1 chr2 228419819 SERPINE1 chr7 100780813 Exonic hg19 NA BI793049 Out-of-frame Inter-chr q36.3 q22.1 114952 ChimerSeq ChiTaRs ChiTaRs ZNF786-ZNF786 ZNF786 chr7 148772645 ZNF786 chr7 148774151 Exonic hg19 NA DA571889 Out-of-frame Intra-chr q36.1 Transcription factor q36.1 Transcription factor 114953 ChimerSeq ChiTaRs ChiTaRs MXD1-RILPL2 MXD1 chr2 70167590 RILPL2 chr12 123907590 Exonic hg19 NA BQ362049 3'UTR-CDS Inter-chr p13.3 Transcription factor q24.31 114954 ChimerSeq ChiTaRs ChiTaRs PBK-FUBP3 PBK chr8 27684873 FUBP3 chr9 133480953 Exonic hg19 NA AA830169 Out-of-frame Inter-chr p21.1 Other:TOPK q34.11 114955 ChimerSeq ChiTaRs ChiTaRs PKP4-POLH PKP4 chr2 159471722 POLH chr6 43549827 Exonic hg19 NA DB510499 Out-of-frame Inter-chr q24.1 p21.1 114956 ChimerSeq ChiTaRs ChiTaRs COL5A2-COL5A2 COL5A2 chr2 189898585 COL5A2 chr2 189898113 Exonic hg19 NA AI752199 Out-of-frame Intra-chr q32.2 q32.2 114957 ChimerSeq ChiTaRs ChiTaRs MLLT3-MLL MLLT3 chr9 20410754 MLL chr11 118359129 Exonic hg19 NA AY282402 Out-of-frame Inter-chr p21.3 q23.3 114958 ChimerSeq ChiTaRs ChiTaRs PDE6A-PDE6A PDE6A chr5 149285009 PDE6A chr5 149285025 Exonic hg19 NA BQ638079 Out-of-frame Intra-chr q32 q32 114959 ChimerSeq ChiTaRs ChiTaRs PLS3-HSPH1 PLS3 chrX 114874759 HSPH1 chr13 31717928 Exonic hg19 NA BQ300629 In-Frame Inter-chr q23 q12.3 114960 ChimerSeq ChiTaRs ChiTaRs ABCC8-ABCC8 ABCC8 chr11 17417468 ABCC8 chr11 17418463 Exonic hg19 NA BF224199 Out-of-frame Intra-chr p15.1 p15.1 114961 ChimerSeq ChiTaRs ChiTaRs ATAD2B-XKR4 ATAD2B chr2 23971975 XKR4 chr8 56033924 Exonic hg19 NA DB326239 Out-of-frame Inter-chr p23.3 q12.1 114962 ChimerSeq ChiTaRs ChiTaRs SMPD1-SMPD1 SMPD1 chr11 6414926 SMPD1 chr11 6415198 Exonic hg19 NA BF853689 Out-of-frame Intra-chr p15.4 p15.4 114963 ChimerSeq ChiTaRs ChiTaRs CERS6-SVIL CERS6 chr2 169326958 SVIL chr10 29839535 Exonic hg19 NA BI050759 Out-of-frame Inter-chr q24.3 p11.23 114964 ChimerSeq ChiTaRs ChiTaRs CANX-SNHG3 CANX chr5 179157013 SNHG3 chr1 28833820 Exonic hg19 NA AU125279 Out-of-frame Inter-chr p35.3 114965 ChimerSeq ChiTaRs ChiTaRs ASTN1-ASTN1 ASTN1 chr1 177031073 ASTN1 chr1 177080655 Exonic hg19 NA AV701799 Out-of-frame Intra-chr q25.2 q25.2 114966 ChimerSeq ChiTaRs ChiTaRs UBQLN1-UBQLN1 UBQLN1 chr9 86293515 UBQLN1 chr9 86279945 Exonic hg19 NA BF809109 Out-of-frame Intra-chr q21.32 q21.32 114967 ChimerSeq ChiTaRs ChiTaRs SEMA5A-GCNT2 SEMA5A chr5 9427433 GCNT2 chr6 10590581 Exonic hg19 NA AA553879 Out-of-frame Inter-chr p15.31 p24.3 114968 ChimerSeq ChiTaRs ChiTaRs HNRNPH3-NDUFA9 HNRNPH3 chr10 70101430 NDUFA9 chr12 4758280 Exonic hg19 NA AU142559 Out-of-frame Inter-chr q21.3 p13.32 114969 ChimerSeq ChiTaRs ChiTaRs FNBP1L-PTPRN2 FNBP1L chr1 94019054 PTPRN2 chr7 158256606 Exonic hg19 NA BE927699 Out-of-frame Inter-chr p22.1 q36.3 114970 ChimerSeq ChiTaRs ChiTaRs TMEM14A-TMEM14A TMEM14A chr6 52551374 TMEM14A chr6 52551172 Exonic hg19 NA AA483659 Out-of-frame Intra-chr p12.2 p12.2 114971 ChimerSeq ChiTaRs ChiTaRs CUL9-MUC7 CUL9 chr6 43150467 MUC7 chr4 71346688 Exonic hg19 NA BX537739 Out-of-frame Inter-chr p21.1 q13.3 114972 ChimerSeq ChiTaRs ChiTaRs CREB3L2-LMO2 CREB3L2 chr7 137564740 LMO2 chr11 33899752 Exonic hg19 NA BI028029 Out-of-frame Inter-chr q33 Transcription factor p13 114973 ChimerSeq ChiTaRs ChiTaRs USP54-USP54 USP54 chr10 75258777 USP54 chr10 75276231 Exonic hg19 NA BE004099 Out-of-frame Intra-chr q22.2 q22.2 114974 ChimerSeq ChiTaRs ChiTaRs KIAA1217-KIAA1217 KIAA1217 chr10 24835412 KIAA1217 chr10 24834948 Exonic hg19 NA BM975589 Out-of-frame Intra-chr p12.2 p12.2 114975 ChimerSeq ChiTaRs ChiTaRs TAF7-TAF7 TAF7 chr5 140699230 TAF7 chr5 140699256 Exonic hg19 NA BG015639 Out-of-frame Intra-chr q31.3 q31.3 114976 ChimerSeq ChiTaRs ChiTaRs LRRCC1-CNTN5 LRRCC1 chr8 86035826 CNTN5 chr11 99903040 Exonic hg19 NA AW811579 Out-of-frame Inter-chr q21.2 q22.1 114977 ChimerSeq ChiTaRs ChiTaRs TSNARE1-TAB2 TSNARE1 chr8 143407533 TAB2 chr6 149699175 Exonic hg19 NA BF092129 Out-of-frame Inter-chr q24.3 q25.1 114978 ChimerSeq ChiTaRs ChiTaRs CDC25A-CDC25A CDC25A chr3 48212672 CDC25A chr3 48209413 Exonic hg19 NA BG942139 Out-of-frame Intra-chr p21.31 p21.31 114979 ChimerSeq ChiTaRs ChiTaRs OGDH-PAN3-AS1 OGDH chr7 44676407 PAN3-AS1 chr13 28713182 Exonic hg19 NA BF367739 Out-of-frame Inter-chr p13 q12.2 114980 ChimerSeq ChiTaRs ChiTaRs PDE12-PDE12 PDE12 chr3 57542620 PDE12 chr3 57542139 Exonic hg19 NA DB468309 Out-of-frame Intra-chr p14.3 p14.3 114981 ChimerSeq ChiTaRs ChiTaRs AIFM1-AIFM1 AIFM1 chrX 129270104 AIFM1 chrX 129270102 Exonic hg19 NA AW835589 Out-of-frame Intra-chr q26.1 q26.1 114982 ChimerSeq ChiTaRs ChiTaRs LRRC15-DYSF LRRC15 chr3 194086206 DYSF chr2 71763912 Exonic hg19 NA BI053549 Out-of-frame Inter-chr q29 p13.2 114983 ChimerSeq ChiTaRs ChiTaRs ATG12-SLC17A5 ATG12 chr5 115167051 SLC17A5 chr6 74303104 Exonic hg19 NA BP386219 Out-of-frame Inter-chr q22.3 q13 114984 ChimerSeq ChiTaRs ChiTaRs PRPF3-PRPF3 PRPF3 chr1 150310730 PRPF3 chr1 150315853 Exonic hg19 NA BQ307309 Out-of-frame Intra-chr q21.2 q21.2 114985 ChimerSeq ChiTaRs ChiTaRs GPX3-S100A8 GPX3 chr5 150407982 S100A8 chr1 153362669 Exonic hg19 NA AW794509 Out-of-frame Inter-chr q33.1 Tumor suppressor gene q21.3 114986 ChimerSeq ChiTaRs ChiTaRs ZDHHC21-PRDM2 ZDHHC21 chr9 14592523 PRDM2 chr1 14111605 Exonic hg19 NA AW893619 Out-of-frame Inter-chr p22.3 p36.21 Tumor suppressor gene Transcription factor 114987 ChimerSeq ChiTaRs ChiTaRs MED23-MED23 MED23 chr6 131930370 MED23 chr6 131931103 Exonic hg19 NA AW363299 Out-of-frame Intra-chr q23.2 q23.2 114988 ChimerSeq ChiTaRs ChiTaRs PTPRZ1-PTPRZ1 PTPRZ1 chr7 121701252 PTPRZ1 chr7 121701221 Exonic hg19 NA BG913369 Out-of-frame Intra-chr q31.32 q31.32 114989 ChimerSeq ChiTaRs ChiTaRs STAG2-STAG2 STAG2 chrX 123105980 STAG2 chrX 123104349 Exonic hg19 NA BE072239 Out-of-frame Intra-chr q25 Oncogene q25 Oncogene 114990 ChimerSeq ChiTaRs ChiTaRs COPG2-CSGALNACT1 COPG2 chr7 130353577 CSGALNACT1 chr8 19315938 Exonic hg19 NA DB148679 Out-of-frame Inter-chr q32.2 p21.3 114991 ChimerSeq ChiTaRs ChiTaRs RBM6-BAZ2A RBM6 chr3 50103774 BAZ2A chr12 57004189 Exonic hg19 NA BQ367639 Out-of-frame Inter-chr p21.31 Tumor suppressor gene q13.3 Transcription factor 114992 ChimerSeq ChiTaRs ChiTaRs BROX-SLC2A10 BROX chr1 222906142 SLC2A10 chr20 45338397 Exonic hg19 NA BU194749 Out-of-frame Inter-chr q41 q13.12 114993 ChimerSeq ChiTaRs ChiTaRs PTPN7-PTPN7 PTPN7 chr1 202123380 PTPN7 chr1 202117662 Exonic hg19 NA BG259619 Out-of-frame Intra-chr q32.1 q32.1 114994 ChimerSeq ChiTaRs ChiTaRs RPL30-KCTD18 RPL30 chr8 99055000 KCTD18 chr2 201353675 Exonic hg19 NA BQ221159 Out-of-frame Inter-chr q22.2 q33.1 114995 ChimerSeq ChiTaRs ChiTaRs CA13-CA13 CA13 chr8 86275973 CA13 chr8 86275991 Exonic hg19 NA BE162309 Out-of-frame Intra-chr q21.2 q21.2 114996 ChimerSeq ChiTaRs ChiTaRs MIR548N-MIR548N MIR548N chr2 179453674 MIR548N chr2 179452924 Exonic hg19 NA F00809 Out-of-frame Intra-chr p14.2 p14.2 114997 ChimerSeq ChiTaRs ChiTaRs KAT6B-FGFR1 KAT6B chr10 76602565 FGFR1 chr8 38273542 Exonic hg19 NA BF932159 Out-of-frame Inter-chr Oncogene p11.23 TK:FGFR Oncogene 114998 ChimerSeq ChiTaRs ChiTaRs PLEKHA6-PLEKHA6 PLEKHA6 chr1 204191423 PLEKHA6 chr1 204190642 Exonic hg19 NA BF529879 Out-of-frame Intra-chr q32.1 q32.1 114999 ChimerSeq ChiTaRs ChiTaRs PYGO2-FTH1 PYGO2 chr1 154934512 FTH1 chr11 61732035 Exonic hg19 NA AK095899 Out-of-frame Inter-chr q21.3 q12.3 115000 ChimerSeq ChiTaRs ChiTaRs BRK1-GRHL2 BRK1 chr3 10168012 GRHL2 chr8 102566434 Exonic hg19 NA BF352519 Out-of-frame Inter-chr p25.3 q22.3 Transcription factor 115001 ChimerSeq ChiTaRs ChiTaRs LAP3-REPS2 LAP3 chr4 17607475 REPS2 chrX 17062375 Exonic hg19 NA CV416019 Out-of-frame Inter-chr p15.32 p22.2 115002 ChimerSeq ChiTaRs ChiTaRs GNAQ-CELF2 GNAQ chr9 80590016 CELF2 chr10 11288431 Exonic hg19 NA BI021299 Out-of-frame Inter-chr q21.2 Oncogene p14 115003 ChimerSeq ChiTaRs ChiTaRs PAPPA-EPAS1 PAPPA chr9 119162149 EPAS1 chr2 46592462 Exonic hg19 NA BI052179 Out-of-frame Inter-chr q33.1 p21 Tumor suppressor gene Transcription factor 115004 ChimerSeq ChiTaRs ChiTaRs NR3C2-NR3C2 NR3C2 chr4 149356705 NR3C2 chr4 149001338 Exonic hg19 NA W28789 Out-of-frame Intra-chr q31.23 Transcription factor q31.23 Transcription factor 115005 ChimerSeq ChiTaRs ChiTaRs HSPB1-KRT19 HSPB1 chr7 75933068 KRT19 chr17 39679869 Exonic hg19 NA CA336509 Out-of-frame Inter-chr q11.23 q21.2 Tumor suppressor gene 115006 ChimerSeq ChiTaRs ChiTaRs NFYC-NDE1 NFYC chr1 41236435 NDE1 chr16 15818018 Exonic hg19 NA BE835819 Out-of-frame Inter-chr p34.2 Transcription factor p13.11 115007 ChimerSeq ChiTaRs ChiTaRs TCF7-MPHOSPH9 TCF7 chr5 133483367 MPHOSPH9 chr12 123701031 Exonic hg19 NA AW856949 Out-of-frame Inter-chr q31.1 Transcription factor q24.31 115008 ChimerSeq ChiTaRs ChiTaRs KCNH7-GCNT2 KCNH7 chr2 163607932 GCNT2 chr6 10629231 Exonic hg19 NA BP398409 Out-of-frame Inter-chr q24.2 p24.3 115009 ChimerSeq ChiTaRs ChiTaRs GRIA1-GRIA1 GRIA1 chr5 153178819 GRIA1 chr5 153179066 Exonic hg19 NA AW895009 Out-of-frame Intra-chr q33.2 q33.2 115010 ChimerSeq ChiTaRs ChiTaRs HIPK2-KCNJ12 HIPK2 chr7 139255485 KCNJ12 chr17 21309188 Exonic hg19 NA BE073399 Out-of-frame Inter-chr q34 CMGC:DYRK Tumor suppressor gene p11.2 115011 ChimerSeq ChiTaRs ChiTaRs GNAT2-GNAT2 GNAT2 chr1 110155251 GNAT2 chr1 110155469 Exonic hg19 NA CD620139 Out-of-frame Intra-chr p13.3 p13.3 115012 ChimerSeq ChiTaRs ChiTaRs PRRC2C-PRRC2C PRRC2C chr1 171504615 PRRC2C chr1 171510160 Exonic hg19 NA BM995409 Out-of-frame Intra-chr q24.3 q24.3 115013 ChimerSeq ChiTaRs ChiTaRs CDKL4-SP3 CDKL4 chr2 39431642 SP3 chr2 174773462 Exonic hg19 NA BF885809 Out-of-frame Intra-chr p22.1 CMGC:CDKL q31.1 Transcription factor 115014 ChimerSeq ChiTaRs ChiTaRs ANAPC16-ANAPC16 ANAPC16 chr10 73768764 ANAPC16 chr10 73768935 Exonic hg19 NA BE940439 Out-of-frame Intra-chr q22.1 q22.1 115015 ChimerSeq ChiTaRs ChiTaRs SMARCA5-APPBP2 SMARCA5 chr4 144474559 APPBP2 chr17 58539388 Exonic hg19 NA AI538939 Out-of-frame Inter-chr q31.21 q23.2 115016 ChimerSeq ChiTaRs ChiTaRs SPRR3-RPS15A SPRR3 chr1 152976131 RPS15A chr16 18800992 Exonic hg19 NA BE716419 Out-of-frame Inter-chr q21.3 p12.3 115017 ChimerSeq ChiTaRs ChiTaRs DOPEY1-KIAA1199 DOPEY1 chr6 83879037 KIAA1199 chr15 81199060 Exonic hg19 NA AI380129 Out-of-frame Inter-chr q14.1 115018 ChimerSeq ChiTaRs ChiTaRs MIR548F1-MIR548F1 MIR548F1 chr1 186307215 MIR548F1 chr1 186325913 Exonic hg19 NA BG573359 Out-of-frame Intra-chr q21.1 q21.1 115019 ChimerSeq ChiTaRs ChiTaRs RPL32P3-SPATA13 RPL32P3 chr3 129106640 SPATA13 chr13 24767312 Exonic hg19 NA BI057139 Out-of-frame Inter-chr q21.3 q12.12 115020 ChimerSeq ChiTaRs ChiTaRs DAB1-CADM2 DAB1 chr1 58507606 CADM2 chr3 85453753 Exonic hg19 NA T05089 Out-of-frame Inter-chr p32.1 p12.1 Tumor suppressor gene 115021 ChimerSeq ChiTaRs ChiTaRs ZFPM2-ZFPM2 ZFPM2 chr8 106807730 ZFPM2 chr8 106807779 Exonic hg19 NA BQ778539 Out-of-frame Intra-chr q22.3 Transcription factor q22.3 Transcription factor 115022 ChimerSeq ChiTaRs ChiTaRs FAM208B-FAM208B FAM208B chr10 5756171 FAM208B chr10 5741463 Exonic hg19 NA BM683999 Out-of-frame Intra-chr p15.1 p15.1 115023 ChimerSeq ChiTaRs ChiTaRs VPS72-TGM3 VPS72 chr1 151149451 TGM3 chr20 2321161 Exonic hg19 NA BE715869 Out-of-frame Inter-chr q21.3 p13 Tumor suppressor gene 115024 ChimerSeq ChiTaRs ChiTaRs GUK1-CGA GUK1 chr1 228336652 CGA chr6 87795223 Exonic hg19 NA BQ012719 Out-of-frame Inter-chr q42.13 q14.3 115025 ChimerSeq ChiTaRs ChiTaRs TMEM246-TUBA1B TMEM246 chr9 104249328 TUBA1B chr12 49521565 Exonic hg19 NA BC001209 Out-of-frame Inter-chr q31.1 q13.12 115026 ChimerSeq ChiTaRs ChiTaRs HIPK2-HIPK2 HIPK2 chr7 139251659 HIPK2 chr7 139251100 Exonic hg19 NA BI035539 Out-of-frame Intra-chr q34 CMGC:DYRK Tumor suppressor gene q34 CMGC:DYRK Tumor suppressor gene 115027 ChimerSeq ChiTaRs ChiTaRs TNFAIP8-NRXN3 TNFAIP8 chr5 118677861 NRXN3 chr14 80158542 Exonic hg19 NA AW894889 Out-of-frame Inter-chr q23.1 q24.3 115028 ChimerSeq ChiTaRs ChiTaRs INPP4B-GPX3 INPP4B chr4 142963356 GPX3 chr5 150406475 Exonic hg19 NA CB044109 Out-of-frame Inter-chr q31.21 Tumor suppressor gene q33.1 Tumor suppressor gene 115029 ChimerSeq ChiTaRs ChiTaRs SFPQ-NR4A1 SFPQ chr1 35658548 NR4A1 chr12 52448107 Exonic hg19 NA AW614419 Out-of-frame Inter-chr p34.3 q13.13 Tumor suppressor gene Transcription factor 115030 ChimerSeq ChiTaRs ChiTaRs NEXN-NEXN NEXN chr1 78395048 NEXN chr1 78395106 Exonic hg19 NA AW373769 Out-of-frame Intra-chr p31.1 p31.1 115031 ChimerSeq ChiTaRs ChiTaRs PER2-PER2 PER2 chr2 239154150 PER2 chr2 239154177 Exonic hg19 NA BF825009 Out-of-frame Intra-chr q37.3 Tumor suppressor gene q37.3 Tumor suppressor gene 115032 ChimerSeq ChiTaRs ChiTaRs BZW2-BZW2 BZW2 chr7 16737795 BZW2 chr7 16744170 Exonic hg19 NA C04569 Out-of-frame Intra-chr p21.1 p21.1 115033 ChimerSeq ChiTaRs ChiTaRs PDHX-PDHX PDHX chr11 34969075 PDHX chr11 34991747 Exonic hg19 NA CV360819 Out-of-frame Intra-chr p13 p13 115034 ChimerSeq ChiTaRs ChiTaRs VPS52-INSIG2 VPS52 chr6 4712690 INSIG2 chr2 118861816 Exonic hg19 NA BG994619 Out-of-frame Inter-chr q14.1 115035 ChimerSeq ChiTaRs ChiTaRs PTMA-ZNF236 PTMA chr2 232577582 ZNF236 chr18 74625701 Exonic hg19 NA BE042789 Out-of-frame Inter-chr q37.1 q23 Transcription factor 115036 ChimerSeq ChiTaRs ChiTaRs GNB1-CASP7 GNB1 chr1 1812550 CASP7 chr10 115439699 Exonic hg19 NA U67319 Out-of-frame Inter-chr p36.33 q25.3 115037 ChimerSeq ChiTaRs ChiTaRs FBN2-NIPAL1 FBN2 chr5 127686613 NIPAL1 chr4 48027148 Exonic hg19 NA BF991099 Out-of-frame Inter-chr q23.3 p12 115038 ChimerSeq ChiTaRs ChiTaRs PBX3-KDM5A PBX3 chr9 128653838 KDM5A chr12 393549 Exonic hg19 NA CD639079 Out-of-frame Inter-chr q33.3 Transcription factor p13.33 Tumor suppressor gene 115039 ChimerSeq ChiTaRs ChiTaRs EMB-GYG2 EMB chr5 49707829 GYG2 chrX 2798741 Exonic hg19 NA U94359 Out-of-frame Inter-chr q11.1 p22.33 115040 ChimerSeq ChiTaRs ChiTaRs FEZ2-FEZ2 FEZ2 chr2 36805921 FEZ2 chr2 36780243 Exonic hg19 NA BE812729 Out-of-frame Intra-chr p22.2 p22.2 115041 ChimerSeq ChiTaRs ChiTaRs STATH-CLDN10 STATH chr4 70868094 CLDN10 chr13 96103484 Exonic hg19 NA BP333889 Out-of-frame Inter-chr q32.1 115042 ChimerSeq ChiTaRs ChiTaRs ZBTB17-AP2A1 ZBTB17 chr1 16268491 AP2A1 chr19 50304791 Exonic hg19 NA AW472939 Out-of-frame Inter-chr p36.13 Transcription factor q13.33 115043 ChimerSeq ChiTaRs ChiTaRs GSTA1-ZNF548 GSTA1 chr6 52664916 ZNF548 chr19 57913381 Exonic hg19 NA AL096729 Out-of-frame Inter-chr p12.2 q13.43 Transcription factor 115044 ChimerSeq ChiTaRs ChiTaRs SLC38A5-MRPS34 SLC38A5 chrX 48317315 MRPS34 chr16 1822017 Exonic hg19 NA CK819899 Out-of-frame Inter-chr p11.23 p13.3 115045 ChimerSeq ChiTaRs ChiTaRs TNS1-KIRREL TNS1 chr2 218730376 KIRREL chr1 158060714 Exonic hg19 NA BF875129 Out-of-frame Inter-chr q35 q23.1 115046 ChimerSeq ChiTaRs ChiTaRs EIF4G2-EIF4G2 EIF4G2 chr11 10824829 EIF4G2 chr11 10825034 Exonic hg19 NA AW948789 Out-of-frame Intra-chr p15.4 p15.4 115047 ChimerSeq ChiTaRs ChiTaRs GGCX-GGCX GGCX chr2 85780185 GGCX chr2 85779567 Exonic hg19 NA BE073949 Out-of-frame Intra-chr p11.2 p11.2 115048 ChimerSeq ChiTaRs ChiTaRs SHISA5-SHISA5 SHISA5 chr3 48509422 SHISA5 chr3 48510860 Exonic hg19 NA AI684459 Out-of-frame Intra-chr p21.31 p21.31 115049 ChimerSeq ChiTaRs ChiTaRs SLC1A3-DCLRE1A SLC1A3 chr5 36608652 DCLRE1A chr10 115613425 Exonic hg19 NA DA111529 Out-of-frame Inter-chr p13.2 q25.3 Tumor suppressor gene 115050 ChimerSeq ChiTaRs ChiTaRs HLA-B-PSMB3 HLA-B chr6 2655820 PSMB3 chr17 36916716 Exonic hg19 NA BP387669 Out-of-frame Inter-chr 115051 ChimerSeq ChiTaRs ChiTaRs SP3-TRPM3 SP3 chr2 174820891 TRPM3 chr9 73943688 Exonic hg19 NA AW367819 Out-of-frame Inter-chr q31.1 Transcription factor q21.13 115052 ChimerSeq ChiTaRs ChiTaRs FLNA-RHOU FLNA chrX 153589933 RHOU chr1 228875840 Exonic hg19 NA BF846139 Out-of-frame Inter-chr q28 Tumor suppressor gene q42.13 115053 ChimerSeq ChiTaRs ChiTaRs ZBTB33-ZBTB33 ZBTB33 chrX 119392125 ZBTB33 chrX 119392096 Exonic hg19 NA AA837749 Out-of-frame Intra-chr q24 Transcription factor q24 Transcription factor 115054 ChimerSeq ChiTaRs ChiTaRs LOC285696-PLEKHA5 LOC285696 chr5 17177648 PLEKHA5 chr12 19448654 Exonic hg19 NA AI218119 Out-of-frame Inter-chr p12.3 115055 ChimerSeq ChiTaRs ChiTaRs MAP3K7-MAP3K7 MAP3K7 chr6 91269903 MAP3K7 chr6 91269948 Exonic hg19 NA BF082259 Out-of-frame Intra-chr q15 STE:STE11 Oncogene q15 STE:STE11 Oncogene 115056 ChimerSeq ChiTaRs ChiTaRs UBE2L6-UBE2L6 UBE2L6 chr11 57322075 UBE2L6 chr11 57319139 Exonic hg19 NA AA480609 Out-of-frame Intra-chr q12.1 q12.1 115057 ChimerSeq ChiTaRs ChiTaRs CCDC69-DUSP1 CCDC69 chr5 150603668 DUSP1 chr5 172195102 Exonic hg19 NA AK127679 Out-of-frame Intra-chr q33.1 q35.1 Tumor suppressor gene 115058 ChimerSeq ChiTaRs ChiTaRs MAP1B-RARS2 MAP1B chr5 71502569 RARS2 chr6 88251831 Exonic hg19 NA BE765789 Out-of-frame Inter-chr q13.2 q15 115059 ChimerSeq ChiTaRs ChiTaRs AGAP5-CCDC155 AGAP5 chr10 75492167 CCDC155 chr19 49897800 Exonic hg19 NA AK128169 Out-of-frame Inter-chr q22.2 q13.33 115060 ChimerSeq ChiTaRs ChiTaRs SMC3-SMC3 SMC3 chr10 112361525 SMC3 chr10 112340669 Exonic hg19 NA BG943879 Out-of-frame Intra-chr q25.2 q25.2 115061 ChimerSeq ChiTaRs ChiTaRs LOC100129148-PSD4 LOC100129148 chr7 139110242 PSD4 chr2 113937947 Exonic hg19 NA BQ023759 Out-of-frame Inter-chr q14.1 115062 ChimerSeq ChiTaRs ChiTaRs HNRNPH3-CDC73 HNRNPH3 chr10 70101437 CDC73 chr1 193108599 Exonic hg19 NA BF903149 Out-of-frame Inter-chr q21.3 q31.2 Oncogene Tumor suppressor gene 115063 ChimerSeq ChiTaRs ChiTaRs UBA1-UBA1 UBA1 chrX 47074329 UBA1 chrX 47070491 Exonic hg19 NA BE089899 Out-of-frame Intra-chr p11.3 p11.3 115064 ChimerSeq ChiTaRs ChiTaRs UBXN7-GRN UBXN7 chr3 196082351 GRN chr17 42430363 Exonic hg19 NA BQ309239 Out-of-frame Inter-chr q29 q21.31 115065 ChimerSeq ChiTaRs ChiTaRs BAMBI-COL15A1 BAMBI chr10 28970913 COL15A1 chr9 101832738 Exonic hg19 NA AI682969 Out-of-frame Inter-chr p12.1 q22.33 115066 ChimerSeq ChiTaRs ChiTaRs DDX1-RPL28 DDX1 chr2 15767242 RPL28 chr19 55897300 Exonic hg19 NA BG473709 Out-of-frame Inter-chr p24.3 q13.42 115067 ChimerSeq ChiTaRs ChiTaRs LDOC1-DYNC1H1 LDOC1 chrX 140271096 DYNC1H1 chr14 102431175 Exonic hg19 NA DR978379 Out-of-frame Inter-chr q27.1 q32.31 115068 ChimerSeq ChiTaRs ChiTaRs DKK3-DKK3 DKK3 chr11 11985235 DKK3 chr11 11985465 Exonic hg19 NA BE812829 Out-of-frame Intra-chr p15.3 Tumor suppressor gene p15.3 Tumor suppressor gene 115069 ChimerSeq ChiTaRs ChiTaRs ZNF800-ZNF800 ZNF800 chr7 127011693 ZNF800 chr7 127011023 Exonic hg19 NA BG925109 Out-of-frame Intra-chr q31.33 Transcription factor q31.33 Transcription factor 115070 ChimerSeq ChiTaRs ChiTaRs SQSTM1-HIPK2 SQSTM1 chr5 179263737 HIPK2 chr7 139246316 Exonic hg19 NA BP396289 Out-of-frame Inter-chr q35.3 q34 CMGC:DYRK Tumor suppressor gene 115071 ChimerSeq ChiTaRs ChiTaRs GRK4-GRK4 GRK4 chr4 3023248 GRK4 chr4 3023249 Exonic hg19 NA BF329649 Out-of-frame Intra-chr p16.3 p16.3 115072 ChimerSeq ChiTaRs ChiTaRs FADS1-TGOLN2 FADS1 chr11 61569629 TGOLN2 chr2 85545198 Exonic hg19 NA CB143399 Out-of-frame Inter-chr q12.2 p11.2 115073 ChimerSeq ChiTaRs ChiTaRs IGF2R-AKAP2 IGF2R chr6 160501263 AKAP2 chr9 112900636 Exonic hg19 NA BF956989 Out-of-frame Inter-chr q25.3 Oncogene Tumor suppressor gene q31.3 115074 ChimerSeq ChiTaRs ChiTaRs PPP6C-SUFU PPP6C chr9 127933749 SUFU chr10 104363368 Exonic hg19 NA M78879 Out-of-frame Inter-chr q33.3 q24.32 Oncogene Tumor suppressor gene 115075 ChimerSeq ChiTaRs ChiTaRs ZNF451-ZNF451 ZNF451 chr6 56973198 ZNF451 chr6 56973019 Exonic hg19 NA AA489269 Out-of-frame Intra-chr p12.1 Transcription factor p12.1 Transcription factor 115076 ChimerSeq ChiTaRs ChiTaRs GSN-FOXO3 GSN chr9 124095120 FOXO3 chr6 108908571 Exonic hg19 NA AA460379 3'UTR-CDS Inter-chr q33.2 Tumor suppressor gene q21 Oncogene Tumor suppressor gene Transcription factor 115077 ChimerSeq ChiTaRs ChiTaRs LARP1B-LARP1B LARP1B chr4 129028340 LARP1B chr4 129097130 Exonic hg19 NA AI652589 Out-of-frame Intra-chr q28.2 q28.2 115078 ChimerSeq ChiTaRs ChiTaRs H6PD-H6PD H6PD chr1 9330918 H6PD chr1 9328817 Exonic hg19 NA AA343949 Out-of-frame Intra-chr p36.22 p36.22 115079 ChimerSeq ChiTaRs ChiTaRs IFNGR1-SLC38A2 IFNGR1 chr6 137519182 SLC38A2 chr12 46751971 Exonic hg19 NA AF116669 Out-of-frame Inter-chr q23.3 q13.11 115080 ChimerSeq ChiTaRs ChiTaRs FN1-FN1 FN1 chr2 216240444 FN1 chr2 216236987 Exonic hg19 NA AI750879 Out-of-frame Intra-chr q35 Oncogene q35 Oncogene 115081 ChimerSeq ChiTaRs ChiTaRs CCDC34-CCDC34 CCDC34 chr11 27384483 CCDC34 chr11 27362938 Exonic hg19 NA CA416029 Out-of-frame Intra-chr p14.1 p14.1 115082 ChimerSeq ChiTaRs ChiTaRs RTKN2-KIAA0100 RTKN2 chr10 63986787 KIAA0100 chr17 26966177 Exonic hg19 NA BF853289 Out-of-frame Inter-chr q21.2 q11.2 115083 ChimerSeq ChiTaRs ChiTaRs ARF4-DEC1 ARF4 chr3 57570192 2001_ 12_ 1_ chr9 118043787 Exonic hg19 NA N32739 Out-of-frame Inter-chr p14.3 115084 ChimerSeq ChiTaRs ChiTaRs RAI14-LAPTM4A RAI14 chr5 34824191 LAPTM4A chr2 20234750 Exonic hg19 NA BE930969 Out-of-frame Inter-chr p13.2 p24.1 115085 ChimerSeq ChiTaRs ChiTaRs ATP1B1-ATP1B1 ATP1B1 chr1 169100837 ATP1B1 chr1 169094232 Exonic hg19 NA BI467069 Out-of-frame Intra-chr q24.2 q24.2 115086 ChimerSeq ChiTaRs ChiTaRs ZNHIT6-ISG20 ZNHIT6 chr1 86174110 ISG20 chr15 89182206 Exonic hg19 NA BC094819 Out-of-frame Inter-chr p22.3 q26.1 115087 ChimerSeq ChiTaRs ChiTaRs MAPK9-MAPK9 MAPK9 chr5 179663188 MAPK9 chr5 179662397 Exonic hg19 NA EB386199 Out-of-frame Intra-chr q35.3 Tumor suppressor gene q35.3 Tumor suppressor gene 115088 ChimerSeq ChiTaRs ChiTaRs OFCC1-OFCC1 OFCC1 chr6 9897240 OFCC1 chr6 9850631 Exonic hg19 NA AF548119 Out-of-frame Intra-chr p24.3 p24.3 115089 ChimerSeq ChiTaRs ChiTaRs GPC1-GPC1 GPC1 chr2 241391387 GPC1 chr2 241391341 Exonic hg19 NA BG012329 Out-of-frame Intra-chr q37.3 q37.3 115090 ChimerSeq ChiTaRs ChiTaRs TG-PFKP TG chr8 134144076 PFKP chr10 3149421 Exonic hg19 NA BI005429 Out-of-frame Inter-chr q24.22 p15.2 115091 ChimerSeq ChiTaRs ChiTaRs PRRX1-SFXN3 PRRX1 chr1 170705649 SFXN3 chr10 102800548 Exonic hg19 NA M95929 Out-of-frame Inter-chr q24.2 Transcription factor q24.31 115092 ChimerSeq ChiTaRs ChiTaRs S100A6-PRPF8 S100A6 chr1 153507284 PRPF8 chr17 1579934 Exonic hg19 NA DB371979 Out-of-frame Inter-chr q21.3 115093 ChimerSeq ChiTaRs ChiTaRs PPP1R10-VCL PPP1R10 chr6 1906089 VCL chr10 75864152 Exonic hg19 NA BF843899 Out-of-frame Inter-chr q22.2 115094 ChimerSeq ChiTaRs ChiTaRs AP1S3-PDSS2 AP1S3 chr2 224622857 PDSS2 chr6 107474658 Exonic hg19 NA BU165869 Out-of-frame Inter-chr q36.1 q21 Tumor suppressor gene 115095 ChimerSeq ChiTaRs ChiTaRs FAM107B-LOC100289019 FAM107B chr10 14635133 LOC100289019 chr9 130876187 Exonic hg19 NA DA433329 Out-of-frame Inter-chr p13 115096 ChimerSeq ChiTaRs ChiTaRs DDB1-DDB1 DDB1 chr11 61077807 DDB1 chr11 61071337 Exonic hg19 NA BF976559 Out-of-frame Intra-chr q12.2 q12.2 115097 ChimerSeq ChiTaRs ChiTaRs DCP2-DCP2 DCP2 chr5 112320344 DCP2 chr5 112320003 Exonic hg19 NA CB852569 Out-of-frame Intra-chr q22.2 q22.2 115098 ChimerSeq ChiTaRs ChiTaRs TCERG1-TCERG1 TCERG1 chr5 145883067 TCERG1 chr5 145863124 Exonic hg19 NA CB240939 Out-of-frame Intra-chr q32 q32 115099 ChimerSeq ChiTaRs ChiTaRs CLASP1-HSD17B11 CLASP1 chr2 122288587 HSD17B11 chr4 88303405 Exonic hg19 NA DA039499 Out-of-frame Inter-chr q14.3 q22.1 115100 ChimerSeq ChiTaRs ChiTaRs GUSBP3-ZNF788 GUSBP3 chr5 69099687 ZNF788 chr19 12224940 Exonic hg19 NA BX110909 Out-of-frame Inter-chr q13.2 p13.2 Transcription factor 115101 ChimerSeq ChiTaRs ChiTaRs BTBD9-FLJ44635 BTBD9 chr6 38139343 FLJ44635 chrX 71368278 Exonic hg19 NA AA485309 Out-of-frame Inter-chr p21.2 115102 ChimerSeq ChiTaRs ChiTaRs CCT7-CCT7 CCT7 chr2 73478390 CCT7 chr2 73478406 Exonic hg19 NA CV324589 Out-of-frame Intra-chr p13.2 p13.2 115103 ChimerSeq ChiTaRs ChiTaRs FCRLA-FCRLA FCRLA chr1 161681138 FCRLA chr1 161681235 Exonic hg19 NA BF896859 Out-of-frame Intra-chr q23.3 q23.3 115104 ChimerSeq ChiTaRs ChiTaRs SEMA5B-LOC100130557 SEMA5B chr3 122716826 LOC100130557 chr1 41155574 Exonic hg19 NA M78299 Out-of-frame Inter-chr q21.1 115105 ChimerSeq ChiTaRs ChiTaRs SMYD3-ARHGAP5 SMYD3 chr1 246469002 ARHGAP5 chr14 32623619 Exonic hg19 NA BF816099 Out-of-frame Inter-chr q44 Transcription factor q12 115106 ChimerSeq ChiTaRs ChiTaRs ZBTB5-ZBTB5 ZBTB5 chr9 37457646 ZBTB5 chr9 37458015 Exonic hg19 NA DQ376078 Out-of-frame Intra-chr p13.2 Transcription factor p13.2 Transcription factor 115107 ChimerSeq ChiTaRs ChiTaRs PUF60-PUF60 PUF60 chr8 144899252 PUF60 chr8 144898548 Exonic hg19 NA CR978549 Out-of-frame Intra-chr 115108 ChimerSeq ChiTaRs ChiTaRs HADH-MEIS1 HADH chr4 108935744 MEIS1 chr2 66784099 Exonic hg19 NA BM504479 Out-of-frame Inter-chr q25 p14 Transcription factor 115109 ChimerSeq ChiTaRs ChiTaRs IGFBP5-IGFBP5 IGFBP5 chr2 217539308 IGFBP5 chr2 217536847 Exonic hg19 NA CA335869 Out-of-frame Intra-chr q35 Tumor suppressor gene q35 Tumor suppressor gene 115110 ChimerSeq ChiTaRs ChiTaRs LOC100505718-TSN LOC100505718 chr8 70008887 TSN chr2 122524462 Exonic hg19 NA AI630709 Out-of-frame Inter-chr q14.3 115111 ChimerSeq ChiTaRs ChiTaRs KAT2B-KAT2B KAT2B chr3 20096513 KAT2B chr3 20095693 Exonic hg19 NA BF876109 Out-of-frame Intra-chr p24.3 p24.3 115112 ChimerSeq ChiTaRs ChiTaRs NINJ1-NINJ1 NINJ1 chr9 95884333 NINJ1 chr9 95884341 Exonic hg19 NA BE843859 Out-of-frame Intra-chr q22.31 Tumor suppressor gene q22.31 Tumor suppressor gene 115113 ChimerSeq ChiTaRs ChiTaRs KIAA2026-CALD1 KIAA2026 chr9 5968187 CALD1 chr7 134617883 Exonic hg19 NA BM682219 Out-of-frame Inter-chr p24.1 q33 115114 ChimerSeq ChiTaRs ChiTaRs SRRM1-SRRM1 SRRM1 chr1 24969835 SRRM1 chr1 24972475 Exonic hg19 NA AA380469 Out-of-frame Intra-chr p36.11 p36.11 115115 ChimerSeq ChiTaRs ChiTaRs MDFI-KIF3C MDFI chr6 41612590 KIF3C chr2 26152172 Exonic hg19 NA BF737169 Out-of-frame Inter-chr p21.1 p23.3 115116 ChimerSeq ChiTaRs ChiTaRs UBAP2L-KIAA1614 UBAP2L chr1 154239001 KIAA1614 chr1 180898054 Exonic hg19 NA BF798199 Out-of-frame Intra-chr q21.3 q25.3 115117 ChimerSeq ChiTaRs ChiTaRs HNRNPA3-PTPN1 HNRNPA3 chr2 178088467 PTPN1 chr20 49192473 Exonic hg19 NA BF877639 Out-of-frame Inter-chr q31.2 q13.13 Tumor suppressor gene 115118 ChimerSeq ChiTaRs ChiTaRs SETX-SETX SETX chr9 135138988 SETX chr9 135138222 Exonic hg19 NA CN359779 Out-of-frame Intra-chr q34.13 q34.13 115119 ChimerSeq ChiTaRs ChiTaRs CDS1-CDS1 CDS1 chr4 85570357 CDS1 chr4 85569849 Exonic hg19 NA BU674749 Out-of-frame Intra-chr q21.23 Tumor suppressor gene q21.23 Tumor suppressor gene 115120 ChimerSeq ChiTaRs ChiTaRs NDUFB5-DGKA NDUFB5 chr3 179342392 DGKA chr12 56347720 Exonic hg19 NA BU948429 Out-of-frame Inter-chr q26.33 q13.2 115121 ChimerSeq ChiTaRs ChiTaRs NCL-IGF2BP1 NCL chr2 232324973 IGF2BP1 chr17 47132662 Exonic hg19 NA BF816639 Out-of-frame Inter-chr q37.1 q21.32 115122 ChimerSeq ChiTaRs ChiTaRs COX6C-ADCY2 COX6C chr8 100904212 ADCY2 chr1 152004982 Exonic hg19 NA CA450159 Out-of-frame Inter-chr q22.2 p15.31 115123 ChimerSeq ChiTaRs ChiTaRs LUZP2-ABCB7 LUZP2 chr11 24843143 ABCB7 chrX 74273116 Exonic hg19 NA AB005289 Out-of-frame Inter-chr p14.3 q13.3 115124 ChimerSeq ChiTaRs ChiTaRs SLC6A20-ZNF574 SLC6A20 chr3 45804472 ZNF574 chr19 42583391 Exonic hg19 NA BF765479 Out-of-frame Inter-chr p21.31 q13.2 Transcription factor 115125 ChimerSeq ChiTaRs ChiTaRs BBX-SPARCL1 BBX chr3 107497303 SPARCL1 chr4 88412796 Exonic hg19 NA BE176379 Out-of-frame Inter-chr q13.12 Transcription factor q22.1 Tumor suppressor gene 115126 ChimerSeq ChiTaRs ChiTaRs ERGIC1-MALAT1 ERGIC1 chr5 172355770 MALAT1 chr11 65268033 Exonic hg19 NA BF090479 Out-of-frame Inter-chr q35.1 q13.1 115127 ChimerSeq ChiTaRs ChiTaRs POMT1-ANP32A POMT1 chr9 134399180 ANP32A chr15 69072041 Exonic hg19 NA AA173919 Out-of-frame Inter-chr q34.13 q23 Tumor suppressor gene 115128 ChimerSeq ChiTaRs ChiTaRs SYT7-SNRPD3 SYT7 chr11 61285108 SNRPD3 chr22 24967917 Exonic hg19 NA AW603119 Out-of-frame Inter-chr q12.2 q11.23 115129 ChimerSeq ChiTaRs ChiTaRs TMEM50A-TMEM50A TMEM50A chr1 25688852 TMEM50A chr1 25688275 Exonic hg19 NA BU675389 3'UTR-CDS Intra-chr p36.11 p36.11 115130 ChimerSeq ChiTaRs ChiTaRs APLN-APLN APLN chrX 128781661 APLN chrX 128781687 Exonic hg19 NA BG009509 Out-of-frame Intra-chr q26.1 q26.1 115131 ChimerSeq ChiTaRs ChiTaRs ACTR2-EIF4A2 ACTR2 chr2 65497523 EIF4A2 chr3 186506064 Exonic hg19 NA BF840289 Out-of-frame Inter-chr p14 TKL:STKR q27.3 115132 ChimerSeq ChiTaRs ChiTaRs RAP1A-RAP1A RAP1A chr1 112196382 RAP1A chr1 112196374 Exonic hg19 NA BP418289 Out-of-frame Intra-chr p13.2 Tumor suppressor gene p13.2 Tumor suppressor gene 115133 ChimerSeq ChiTaRs ChiTaRs ITPR3-SETD5 ITPR3 chr6 33648408 SETD5 chr3 9516855 Exonic hg19 NA BF763529 Out-of-frame Inter-chr p21.31 p25.3 115134 ChimerSeq ChiTaRs ChiTaRs ACADL-MAML2 ACADL chr2 211070643 MAML2 chr11 95805569 Exonic hg19 NA BQ343589 Out-of-frame Inter-chr q34 q21 Oncogene 115135 ChimerSeq ChiTaRs ChiTaRs HIST1H2BC-TNFRSF1A HIST1H2BC chr6 26124153 TNFRSF1A chr12 6451060 Exonic hg19 NA DA769609 Out-of-frame Inter-chr p22.2 p13.31 115136 ChimerSeq ChiTaRs ChiTaRs PSMA5-USF1 PSMA5 chr1 109969062 USF1 chr1 161012649 Exonic hg19 NA BP284679 Out-of-frame Intra-chr p13.3 q23.3 Transcription factor 115137 ChimerSeq ChiTaRs ChiTaRs GBE1-ITGA3 GBE1 chr3 81562736 ITGA3 chr17 48145617 Exonic hg19 NA CA428629 Out-of-frame Inter-chr p12.2 q21.33 115138 ChimerSeq ChiTaRs ChiTaRs ZFX-MTA3 ZFX chrX 24220276 MTA3 chr2 42970253 Exonic hg19 NA R17109 Out-of-frame Inter-chr p22.11 Transcription factor p21 115139 ChimerSeq ChiTaRs ChiTaRs LPP-LPP LPP chr3 188594617 LPP chr3 188594603 Exonic hg19 NA BG176709 Out-of-frame Intra-chr q27.3 Oncogene q27.3 Oncogene 115140 ChimerSeq ChiTaRs ChiTaRs MAPKAP1-KCTD10 MAPKAP1 chr9 128319344 KCTD10 chr12 109888557 Exonic hg19 NA BE159469 Out-of-frame Inter-chr q33.3 q24.11 115141 ChimerSeq ChiTaRs ChiTaRs RAPGEF1-COL1A1 RAPGEF1 chr9 134452396 COL1A1 chr17 48266841 Exonic hg19 NA AW241369 Out-of-frame Inter-chr q34.13 q21.33 Oncogene 115142 ChimerSeq ChiTaRs ChiTaRs SIAH2-SIAH2 SIAH2 chr3 150476316 SIAH2 chr3 150476376 Exonic hg19 NA AK023869 Out-of-frame Intra-chr q25.1 q25.1 115143 ChimerSeq ChiTaRs ChiTaRs SLC4A2-SLC4A2 SLC4A2 chr7 150767319 SLC4A2 chr7 150765169 Exonic hg19 NA DA571099 Out-of-frame Intra-chr q36.1 q36.1 115144 ChimerSeq ChiTaRs ChiTaRs SOX4-C2CD3 SOX4 chr6 21597192 C2CD3 chr11 73753123 Exonic hg19 NA DB315449 Out-of-frame Inter-chr p22.3 Transcription factor q13.4 115145 ChimerSeq ChiTaRs ChiTaRs ZNF438-ZNF438 ZNF438 chr10 31199309 ZNF438 chr10 31199326 Exonic hg19 NA AW893509 Out-of-frame Intra-chr p11.23 Transcription factor p11.23 Transcription factor 115146 ChimerSeq ChiTaRs ChiTaRs CD74-NUSAP1 CD74 chr5 149792314 NUSAP1 chr15 41625069 Exonic hg19 NA DB129419 Out-of-frame Inter-chr q33.1 q15.1 115147 ChimerSeq ChiTaRs ChiTaRs CLK1-PAPPA CLK1 chr2 201722483 PAPPA chr9 119162663 Exonic hg19 NA BF085289 Out-of-frame Inter-chr q33.1 CMGC:CLK q33.1 115148 ChimerSeq ChiTaRs ChiTaRs NPHP3-C10orf11 NPHP3 chr3 132437190 C10orf11 chr10 77765390 Exonic hg19 NA CA397439 Out-of-frame Inter-chr q22.1 115149 ChimerSeq ChiTaRs ChiTaRs HSPA4L-DSP HSPA4L chr4 128754142 DSP chr6 7586608 Exonic hg19 NA BF746859 Out-of-frame Inter-chr q28.1 p24.3 Tumor suppressor gene 115150 ChimerSeq ChiTaRs ChiTaRs PCSK1-EPCAM PCSK1 chr5 95751490 EPCAM chr2 47606120 Exonic hg19 NA CV313519 Out-of-frame Inter-chr q15 p21 115151 ChimerSeq ChiTaRs ChiTaRs OSTF1-SYNE2 OSTF1 chr9 77752848 SYNE2 chr14 64690040 Exonic hg19 NA AW935999 Out-of-frame Inter-chr q21.13 q23.2 115152 ChimerSeq ChiTaRs ChiTaRs TBC1D1-TBC1D1 TBC1D1 chr4 38091688 TBC1D1 chr4 38016470 Exonic hg19 NA BI910369 Out-of-frame Intra-chr p14 p14 115153 ChimerSeq ChiTaRs ChiTaRs FIBIN-FIBIN FIBIN chr11 27016576 FIBIN chr11 27016157 Exonic hg19 NA CN481799 Out-of-frame Intra-chr p14.2 p14.2 115154 ChimerSeq ChiTaRs ChiTaRs IFT80-MAST4 IFT80 chr3 160150177 MAST4 chr5 66439824 Exonic hg19 NA BE764189 Out-of-frame Inter-chr q25.33 q12.3 AGC:MAST 115155 ChimerSeq ChiTaRs ChiTaRs APC-SYTL4 APC chr5 112181077 SYTL4 chrX 99980914 Exonic hg19 NA BQ346429 Out-of-frame Inter-chr q22.2 Oncogene Tumor suppressor gene q22.1 115156 ChimerSeq ChiTaRs ChiTaRs GATAD2B-TTTY14 GATAD2B chr1 153839043 TTTY14 chrY 21154120 Exonic hg19 NA AU141549 Out-of-frame Inter-chr Transcription factor q11.222 115157 ChimerSeq ChiTaRs ChiTaRs SLC34A2-SLC34A2 SLC34A2 chr4 25679122 SLC34A2 chr4 25679893 Exonic hg19 NA BG996029 Out-of-frame Intra-chr p15.2 p15.2 115158 ChimerSeq ChiTaRs ChiTaRs MTR-MTR MTR chr1 237054571 MTR chr1 237057750 Exonic hg19 NA CV363529 Out-of-frame Intra-chr q43 Oncogene q43 Oncogene 115159 ChimerSeq ChiTaRs ChiTaRs ARHGAP22-AQP1 ARHGAP22 chr10 49700876 AQP1 chr7 30965008 Exonic hg19 NA EB387289 Out-of-frame Inter-chr q11.23 p14.3 115160 ChimerSeq ChiTaRs ChiTaRs YME1L1-ZNF880 YME1L1 chr10 27434461 ZNF880 chr19 52877600 Exonic hg19 NA BF930789 Out-of-frame Inter-chr p12.1 q13.41 Transcription factor 115161 ChimerSeq ChiTaRs ChiTaRs JAK2-JAK2 JAK2 chr9 5099325 JAK2 chr9 5099181 Exonic hg19 NA BI025699 Out-of-frame Intra-chr p24.1 TK:JakA Oncogene p24.1 TK:JakA Oncogene 115162 ChimerSeq ChiTaRs ChiTaRs AKAP12-MED12 AKAP12 chr6 151671056 MED12 chrX 70346111 Exonic hg19 NA BE005999 Out-of-frame Inter-chr q25.1 Tumor suppressor gene q13.1 Oncogene 115163 ChimerSeq ChiTaRs ChiTaRs PSMA1-PKP4 PSMA1 chr11 14562045 PKP4 chr2 159433781 Exonic hg19 NA DA097339 Out-of-frame Inter-chr p15.2 q24.1 115164 ChimerSeq ChiTaRs ChiTaRs EPAS1-SLC43A2 EPAS1 chr2 46609605 SLC43A2 chr17 1506599 Exonic hg19 NA BI054269 Out-of-frame Inter-chr p21 Tumor suppressor gene Transcription factor 115165 ChimerSeq ChiTaRs ChiTaRs SLC39A7-SLC39A7 SLC39A7 chr6 4402292 SLC39A7 chr6 4402353 Exonic hg19 NA AW885689 Out-of-frame Intra-chr 115166 ChimerSeq ChiTaRs ChiTaRs SLCO2A1-RREB1 SLCO2A1 chr3 133724042 RREB1 chr6 7251441 Exonic hg19 NA AW845389 Out-of-frame Inter-chr q22.2 p24.3 Transcription factor 115167 ChimerSeq ChiTaRs ChiTaRs SPTBN1-ENO1 SPTBN1 chr2 54895594 ENO1 chr1 8931100 Exonic hg19 NA BF926899 Out-of-frame Inter-chr p16.2 Tumor suppressor gene p36.23 115168 ChimerSeq ChiTaRs ChiTaRs SDF4-PLA2G15 SDF4 chr1 1159336 PLA2G15 chr16 68294264 Exonic hg19 NA T11609 Out-of-frame Inter-chr p36.33 q22.1 115169 ChimerSeq ChiTaRs ChiTaRs GALNT14-LAMTOR2 GALNT14 chr2 31361369 LAMTOR2 chr1 156024587 Exonic hg19 NA AK024039 Out-of-frame Inter-chr p23.1 q22 115170 ChimerSeq ChiTaRs ChiTaRs DGKZ-PCSK7 DGKZ chr11 46398926 PCSK7 chr11 117096141 Exonic hg19 NA BG945849 Out-of-frame Intra-chr p11.2 q23.3 115171 ChimerSeq ChiTaRs ChiTaRs VCL-VCL VCL chr10 75879787 VCL chr10 75879238 Exonic hg19 NA BU608049 Out-of-frame Intra-chr q22.2 q22.2 115172 ChimerSeq ChiTaRs ChiTaRs DUSP4-SRSF5 DUSP4 chr8 29191260 SRSF5 chr14 70238017 Exonic hg19 NA BF802699 Out-of-frame Inter-chr p12 q24.1 115173 ChimerSeq ChiTaRs ChiTaRs LOXL4-MPO LOXL4 chr10 100008717 MPO chr17 56350354 Exonic hg19 NA BI018469 Out-of-frame Inter-chr q24.2 q22 115174 ChimerSeq ChiTaRs ChiTaRs PDLIM5-ZRANB1 PDLIM5 chr4 95453301 ZRANB1 chr10 126666961 Exonic hg19 NA AW803539 Out-of-frame Inter-chr q22.3 q26.13 115175 ChimerSeq ChiTaRs ChiTaRs ANP32B-ANP32B ANP32B chr9 100747593 ANP32B chr9 100747585 Exonic hg19 NA BF751669 Out-of-frame Intra-chr q22.33 q22.33 115176 ChimerSeq ChiTaRs ChiTaRs NCOA2-RHOB NCOA2 chr8 71246573 RHOB chr2 20648632 Exonic hg19 NA BF088409 Out-of-frame Inter-chr q13.3 Oncogene Transcription factor p24.1 Tumor suppressor gene 115177 ChimerSeq ChiTaRs ChiTaRs CSRNP1-CSRNP1 CSRNP1 chr3 39183807 CSRNP1 chr3 39184342 Exonic hg19 NA CN402169 Out-of-frame Intra-chr p22.2 Tumor suppressor gene Transcription factor p22.2 Tumor suppressor gene Transcription factor 115178 ChimerSeq ChiTaRs ChiTaRs PSD3-SNRPN PSD3 chr8 18533584 SNRPN chr15 25248001 Exonic hg19 NA AW894859 Out-of-frame Inter-chr p22 q11.2 115179 ChimerSeq ChiTaRs ChiTaRs RFC4-RFC4 RFC4 chr3 186510723 RFC4 chr3 186507687 Exonic hg19 NA M87339 Out-of-frame Intra-chr q27.3 q27.3 115180 ChimerSeq ChiTaRs ChiTaRs RIOK1-IQCJ-SCHIP1 RIOK1 chr6 7414576 IQCJ-SCHIP1 chr3 159346159 Exonic hg19 NA BQ334149 Out-of-frame Inter-chr p24.3 Atypical:RIO q25.32 115181 ChimerSeq ChiTaRs ChiTaRs LMNA-LMNA LMNA chr1 156104751 LMNA chr1 156105753 Exonic hg19 NA AA852769 Out-of-frame Intra-chr q22 q22 115182 ChimerSeq ChiTaRs ChiTaRs SPRED2-SYNE2 SPRED2 chr2 65633114 SYNE2 chr14 64351333 Exonic hg19 NA AA456989 Out-of-frame Inter-chr p14 q23.2 115183 ChimerSeq ChiTaRs ChiTaRs QSOX1-QSOX1 QSOX1 chr1 180165458 QSOX1 chr1 180144455 Exonic hg19 NA BG978499 In-Frame Intra-chr q25.2 q25.2 115184 ChimerSeq ChiTaRs ChiTaRs LINC00312-ATF4 LINC00312 chr3 8615220 ATF4 chr22 39918548 Exonic hg19 NA BC055409 Out-of-frame Inter-chr q13.1 Transcription factor 115185 ChimerSeq ChiTaRs ChiTaRs RGS20-RGS20 RGS20 chr8 54859340 RGS20 chr8 54859365 Exonic hg19 NA BU680699 Out-of-frame Intra-chr q11.23 q11.23 115186 ChimerSeq ChiTaRs ChiTaRs F3-TMTC2 F3 chr1 94995979 TMTC2 chr12 83148051 Exonic hg19 NA BE936579 Out-of-frame Inter-chr p21.3 q21.31 115187 ChimerSeq ChiTaRs ChiTaRs UPP1-UPP1 UPP1 chr7 48141530 UPP1 chr7 48134359 Exonic hg19 NA BG005429 CDS-5'UTR Intra-chr p12.3 p12.3 115188 ChimerSeq ChiTaRs ChiTaRs OXNAD1-OXNAD1 OXNAD1 chr3 16356330 OXNAD1 chr3 16356537 Exonic hg19 NA CF887349 Out-of-frame Intra-chr p25.1 p25.1 115189 ChimerSeq ChiTaRs ChiTaRs SMARCC1-SMARCC1 SMARCC1 chr3 47785050 SMARCC1 chr3 47784377 Exonic hg19 NA AA470499 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene 115190 ChimerSeq ChiTaRs ChiTaRs HPCAL1-SEMA6D HPCAL1 chr2 10500986 SEMA6D chr15 48060775 Exonic hg19 NA DA213399 Out-of-frame Inter-chr p25.1 q21.1 115191 ChimerSeq ChiTaRs ChiTaRs TOMM7-NCBP1 TOMM7 chr7 22852892 NCBP1 chr9 100435711 Exonic hg19 NA AW877449 Out-of-frame Inter-chr p15.3 q22.33 115192 ChimerSeq ChiTaRs ChiTaRs PARG-NEFM PARG chr10 51562510 NEFM chr8 24774689 Exonic hg19 NA AI659589 Out-of-frame Inter-chr q11.23 p21.2 115193 ChimerSeq ChiTaRs ChiTaRs PAK2-PTPN11 PAK2 chr3 196556363 PTPN11 chr12 112946528 Exonic hg19 NA AW390149 Out-of-frame Inter-chr q29 STE:STE20 q24.13 Oncogene Tumor suppressor gene 115194 ChimerSeq ChiTaRs ChiTaRs CHRM3-CHRM3 CHRM3 chr1 239855286 CHRM3 chr1 239844738 Exonic hg19 NA BE143319 Out-of-frame Intra-chr q43 q43 115195 ChimerSeq ChiTaRs ChiTaRs LCK-ZNF385D LCK chr1 32728486 ZNF385D chr3 21616508 Exonic hg19 NA BF513139 Out-of-frame Inter-chr p35.2 TK:Src Oncogene p24.3 Transcription factor 115196 ChimerSeq ChiTaRs ChiTaRs NEBL-NEBL NEBL chr10 21215089 NEBL chr10 21215104 Exonic hg19 NA BF329099 Out-of-frame Intra-chr p12.31 p12.31 115197 ChimerSeq ChiTaRs ChiTaRs SPTAN1-NARFL SPTAN1 chr9 131346222 NARFL chr16 786347 Exonic hg19 NA BE763539 Out-of-frame Inter-chr q34.11 p13.3 115198 ChimerSeq ChiTaRs ChiTaRs DDX50-CDK13 DDX50 chr10 70706368 CDK13 chr7 40027660 Exonic hg19 NA CN485349 Out-of-frame Inter-chr q22.1 p14.1 115199 ChimerSeq ChiTaRs ChiTaRs XIRP1-IFT88 XIRP1 chr3 39229072 IFT88 chr13 21237594 Exonic hg19 NA BE837609 Out-of-frame Inter-chr p22.2 q12.11 Tumor suppressor gene 115200 ChimerSeq ChiTaRs ChiTaRs NFIB-NFIB NFIB chr9 14087230 NFIB chr9 14086779 Exonic hg19 NA BI495276 Out-of-frame Intra-chr p22.3 Transcription factor p22.3 Transcription factor 115201 ChimerSeq ChiTaRs ChiTaRs FAM127A-ACADSB FAM127A chrX 134167195 ACADSB chr10 124800157 Exonic hg19 NA EB388356 Out-of-frame Inter-chr q26.13 115202 ChimerSeq ChiTaRs ChiTaRs FAM184B-ABL1 FAM184B chr4 17643156 ABL1 chr9 133651494 Exonic hg19 NA U19410 Out-of-frame Inter-chr p15.31 q34.12 TK:Abl Oncogene 115203 ChimerSeq ChiTaRs ChiTaRs INPP4B-ELL3 INPP4B chr4 142957065 ELL3 chr15 44084546 Exonic hg19 NA BG990026 Out-of-frame Inter-chr q31.21 Tumor suppressor gene q15.3 115204 ChimerSeq ChiTaRs ChiTaRs SPARC-RBMX SPARC chr5 151042333 RBMX chrX 135956476 Exonic hg19 NA AA972866 Out-of-frame Inter-chr q33.1 Tumor suppressor gene q26.3 Tumor suppressor gene 115205 ChimerSeq ChiTaRs ChiTaRs RANBP9-RANBP9 RANBP9 chr6 13621839 RANBP9 chr6 13621734 Exonic hg19 NA AL119936 Out-of-frame Intra-chr p23 Tumor suppressor gene p23 Tumor suppressor gene 115206 ChimerSeq ChiTaRs ChiTaRs FBXL13-TERF2IP FBXL13 chr7 102584987 TERF2IP chr16 75690424 Exonic hg19 NA BF934116 Out-of-frame Inter-chr q22.1 Tumor suppressor gene q23.1 115207 ChimerSeq ChiTaRs ChiTaRs SQSTM1-SQSTM1 SQSTM1 chr5 179260760 SQSTM1 chr5 179260745 Exonic hg19 NA BU171956 Out-of-frame Intra-chr q35.3 q35.3 115208 ChimerSeq ChiTaRs ChiTaRs PUM1-EPC2 PUM1 chr1 31434895 EPC2 chr2 149528720 Exonic hg19 NA BE836626 Out-of-frame Inter-chr p35.2 q23.1 115209 ChimerSeq ChiTaRs ChiTaRs TMEM33-EIF3L TMEM33 chr4 41958873 EIF3L chr22 38245426 Exonic hg19 NA DA876636 Out-of-frame Inter-chr p13 q13.1 115210 ChimerSeq ChiTaRs ChiTaRs CAMK2N1-FAM5C CAMK2N1 chr1 20809388 FAM5C chr1 190198670 Exonic hg19 NA BE699216 Out-of-frame Intra-chr p36.12 Tumor suppressor gene 115211 ChimerSeq ChiTaRs ChiTaRs CHPF2-IRS2 CHPF2 chr7 150932276 IRS2 chr13 110433111 Exonic hg19 NA BF753816 Out-of-frame Inter-chr q36.1 q34 Oncogene 115212 ChimerSeq ChiTaRs ChiTaRs BOC-ACTR1A BOC chr3 113006302 ACTR1A chr10 104239495 Exonic hg19 NA AW956356 Out-of-frame Inter-chr q13.2 q24.32 115213 ChimerSeq ChiTaRs ChiTaRs FGB-FGB FGB chr4 155492174 FGB chr4 155492184 Exonic hg19 NA AA491846 Out-of-frame Intra-chr q31.3 q31.3 115214 ChimerSeq ChiTaRs ChiTaRs KDM4A-CSE1L KDM4A chr1 44170143 CSE1L chr20 47663583 Exonic hg19 NA BF196906 Out-of-frame Inter-chr p34.2 q13.13 115215 ChimerSeq ChiTaRs ChiTaRs MORF4L2-GNB1 MORF4L2 chrX 102935318 GNB1 chr1 1778027 Exonic hg19 NA AV717096 Out-of-frame Inter-chr q22.2 p36.33 115216 ChimerSeq ChiTaRs ChiTaRs VAMP3-VAMP3 VAMP3 chr1 7840608 VAMP3 chr1 7840664 Exonic hg19 NA BG171606 Out-of-frame Intra-chr p36.23 p36.23 115217 ChimerSeq ChiTaRs ChiTaRs CCRN4L-MMS19 CCRN4L chr4 139957573 MMS19 chr10 99218083 Exonic hg19 NA AX747016 Out-of-frame Inter-chr q24.1 115218 ChimerSeq ChiTaRs ChiTaRs AFAP1L2-GPX3 AFAP1L2 chr10 116057013 GPX3 chr5 150406494 Exonic hg19 NA BG990596 Out-of-frame Inter-chr q25.3 Tumor suppressor gene q33.1 Tumor suppressor gene 115219 ChimerSeq ChiTaRs ChiTaRs C1GALT1-C1GALT1 C1GALT1 chr7 7287273 C1GALT1 chr7 7287251 Exonic hg19 NA AL134316 Out-of-frame Intra-chr p22.1 p22.1 115220 ChimerSeq ChiTaRs ChiTaRs FABP1-FABP1 FABP1 chr2 88427473 FABP1 chr2 88422552 Exonic hg19 NA CB163566 Out-of-frame Intra-chr p11.2 p11.2 115221 ChimerSeq ChiTaRs ChiTaRs MPDZ-MPDZ MPDZ chr9 13126721 MPDZ chr9 13136141 Exonic hg19 NA BF954556 Out-of-frame Intra-chr p23 p23 115222 ChimerSeq ChiTaRs ChiTaRs MSH6-MSH6 MSH6 chr2 48028145 MSH6 chr2 48028122 Exonic hg19 NA AW805096 Out-of-frame Intra-chr p16.3 Oncogene p16.3 Oncogene 115223 ChimerSeq ChiTaRs ChiTaRs UXS1-VTI1A UXS1 chr2 106710518 VTI1A chr10 114374416 Exonic hg19 NA BF367966 Out-of-frame Inter-chr q12.2 q25.2 115224 ChimerSeq ChiTaRs ChiTaRs SLC35F5-SLC35F5 SLC35F5 chr2 114493824 SLC35F5 chr2 114485968 Exonic hg19 NA AW182866 Out-of-frame Intra-chr q14.1 q14.1 115225 ChimerSeq ChiTaRs ChiTaRs KIAA0368-KIAA0368 KIAA0368 chr9 114131431 KIAA0368 chr9 114173318 Exonic hg19 NA BI018816 Out-of-frame Intra-chr q31.3 q31.3 115226 ChimerSeq ChiTaRs ChiTaRs IMMT-FOXJ3 IMMT chr2 86398590 FOXJ3 chr1 42705688 Exonic hg19 NA BF816706 Out-of-frame Inter-chr p11.2 p34.2 Transcription factor 115227 ChimerSeq ChiTaRs ChiTaRs RPL34-PCCB RPL34 chr4 109543328 PCCB chr3 135969191 Exonic hg19 NA AU126976 Out-of-frame Inter-chr q25 q22.3 115228 ChimerSeq ChiTaRs ChiTaRs ATXN1-SVOP ATXN1 chr6 16695808 SVOP chr12 109304663 Exonic hg19 NA BQ639696 Out-of-frame Inter-chr p22.3 q24.11 115229 ChimerSeq ChiTaRs ChiTaRs ZNF185-B2M ZNF185 chrX 152141128 B2M chr15 45010141 Exonic hg19 NA AW997596 Out-of-frame Inter-chr q28 Tumor suppressor gene Oncogene 115230 ChimerSeq ChiTaRs ChiTaRs TRAPPC12-FKBP5 TRAPPC12 chr2 3463314 FKBP5 chr6 35554840 Exonic hg19 NA DB042736 Out-of-frame Inter-chr p21.31 115231 ChimerSeq ChiTaRs ChiTaRs WAC-NRP1 WAC chr10 28880511 NRP1 chr10 33536648 Exonic hg19 NA AW373556 Out-of-frame Intra-chr p12.1 p11.22 115232 ChimerSeq ChiTaRs ChiTaRs CLSTN1-RUSC2 CLSTN1 chr1 9804527 RUSC2 chr9 35560384 Exonic hg19 NA BP274296 Out-of-frame Inter-chr p36.22 p13.3 115233 ChimerSeq ChiTaRs ChiTaRs KCNT2-KCNT2 KCNT2 chr1 196249484 KCNT2 chr1 196248990 Exonic hg19 NA CN286506 Out-of-frame Intra-chr q31.3 q31.3 115234 ChimerSeq ChiTaRs ChiTaRs PRIMPOL-PRIMPOL PRIMPOL chr4 185616106 PRIMPOL chr4 185612820 Exonic hg19 NA CF130286 Out-of-frame Intra-chr q35.1 q35.1 115235 ChimerSeq ChiTaRs ChiTaRs MPHOSPH10-MPHOSPH10 MPHOSPH10 chr2 71376429 MPHOSPH10 chr2 71365744 Exonic hg19 NA CA315016 Out-of-frame Intra-chr p13.3 p13.3 115236 ChimerSeq ChiTaRs ChiTaRs YWHAQ-SFRP1 YWHAQ chr2 9724332 SFRP1 chr8 41120428 Exonic hg19 NA CN271876 Out-of-frame Inter-chr p25.1 p11.21 Tumor suppressor gene 115237 ChimerSeq ChiTaRs ChiTaRs PLEKHG1-PLEKHG1 PLEKHG1 chr6 151147037 PLEKHG1 chr6 151138948 Exonic hg19 NA BQ893566 Out-of-frame Intra-chr q25.1 q25.1 115238 ChimerSeq ChiTaRs ChiTaRs CD81-AUTS2 CD81 chr11 2418062 AUTS2 chr7 69183030 Exonic hg19 NA AW498576 Out-of-frame Inter-chr p15.5 q11.22 115239 ChimerSeq ChiTaRs ChiTaRs GNB1-DAD1 GNB1 chr1 1717154 DAD1 chr14 23033805 Exonic hg19 NA BC013646 Out-of-frame Inter-chr p36.33 q11.2 115240 ChimerSeq ChiTaRs ChiTaRs CD244-AHCYL2 CD244 chr1 160810825 AHCYL2 chr7 129069472 Exonic hg19 NA AW947006 Out-of-frame Inter-chr q23.3 q32.1 115241 ChimerSeq ChiTaRs ChiTaRs BICC1-SMTN BICC1 chr10 60589093 SMTN chr22 31477306 Exonic hg19 NA AU099326 Out-of-frame Inter-chr q21.1 q12.2 115242 ChimerSeq ChiTaRs ChiTaRs TRAK2-GHRLOS TRAK2 chr2 202250978 GHRLOS chr3 10333402 Exonic hg19 NA BF849706 Out-of-frame Inter-chr q33.1 p25.3 115243 ChimerSeq ChiTaRs ChiTaRs GNB1-TARDBP GNB1 chr1 1716836 TARDBP chr1 11082454 Exonic hg19 NA AA864236 Out-of-frame Intra-chr p36.33 p36.22 115244 ChimerSeq ChiTaRs ChiTaRs GNB2L1-CTNNB1 GNB2L1 chr5 180664690 CTNNB1 chr3 41274841 Exonic hg19 NA DB330856 Out-of-frame Inter-chr Tumor suppressor gene p22.1 Oncogene 115245 ChimerSeq ChiTaRs ChiTaRs ARHGEF37-DIRC3 ARHGEF37 chr5 148969771 DIRC3 chr2 218615010 Exonic hg19 NA T41216 Out-of-frame Inter-chr q32 q35 115246 ChimerSeq ChiTaRs ChiTaRs ZNF141-NUP98 ZNF141 chr4 337645 NUP98 chr11 3746417 Exonic hg19 NA DA817816 Out-of-frame Inter-chr p16.3 Transcription factor p15.4 Oncogene Tumor suppressor gene 115247 ChimerSeq ChiTaRs ChiTaRs TSEN15-ALKBH5 TSEN15 chr1 184032832 ALKBH5 chr17 18112351 Exonic hg19 NA BQ011056 Out-of-frame Inter-chr q25.3 p11.2 115248 ChimerSeq ChiTaRs ChiTaRs USP34-RFC4 USP34 chr2 61667461 RFC4 chr3 186509596 Exonic hg19 NA CV347166 Out-of-frame Inter-chr p15 q27.3 115249 ChimerSeq ChiTaRs ChiTaRs SLC6A6-SLC6A6 SLC6A6 chr3 14530138 SLC6A6 chr3 14529798 Exonic hg19 NA W25826 Out-of-frame Intra-chr p25.1 p25.1 115250 ChimerSeq ChiTaRs ChiTaRs IARS-SLC10A7 IARS chr9 95019084 SLC10A7 chr4 147187380 Exonic hg19 NA W52666 Out-of-frame Inter-chr q22.31 q31.22 115251 ChimerSeq ChiTaRs ChiTaRs STAU2-DEK STAU2 chr8 74650555 DEK chr6 18224646 Exonic hg19 NA BF336846 Out-of-frame Inter-chr q21.11 p22.3 Oncogene 115252 ChimerSeq ChiTaRs ChiTaRs SAT1-SAT1 SAT1 chrX 23804055 SAT1 chrX 23804095 Exonic hg19 NA W39276 Out-of-frame Intra-chr p22.11 p22.11 115253 ChimerSeq ChiTaRs ChiTaRs CLSPN-CANX CLSPN chr1 36235467 CANX chr5 179135979 Exonic hg19 NA BI019346 Out-of-frame Inter-chr p34.3 115254 ChimerSeq ChiTaRs ChiTaRs YY1AP1-HOXA3 YY1AP1 chr1 155736358 HOXA3 chr7 27159217 Exonic hg19 NA BG954176 Out-of-frame Inter-chr q22 p15.2 Transcription factor 115255 ChimerSeq ChiTaRs ChiTaRs RNF11-CHD2 RNF11 chr1 51704459 CHD2 chr15 93543460 Exonic hg19 NA BQ339506 Out-of-frame Inter-chr p32.3 q26.1 115256 ChimerSeq ChiTaRs ChiTaRs PTAR1-PTAR1 PTAR1 chr9 72325442 PTAR1 chr9 72324441 Exonic hg19 NA BG289106 Out-of-frame Intra-chr q21.12 q21.12 115257 ChimerSeq ChiTaRs ChiTaRs TYW3-TYW3 TYW3 chr1 75231331 TYW3 chr1 75230424 Exonic hg19 NA AW502886 Out-of-frame Intra-chr p31.1 p31.1 115258 ChimerSeq ChiTaRs ChiTaRs FAM54B-FAM54B FAM54B chr1 26158643 FAM54B chr1 26159163 Exonic hg19 NA BF336776 Out-of-frame Intra-chr 115259 ChimerSeq ChiTaRs ChiTaRs FAM81B-FAM81B FAM81B chr5 94786145 FAM81B chr5 94782373 Exonic hg19 NA CA311866 Out-of-frame Intra-chr q15 q15 115260 ChimerSeq ChiTaRs ChiTaRs BNIP3L-MKI67 BNIP3L chr8 26268507 MKI67 chr10 129903843 Exonic hg19 NA AA002186 Out-of-frame Inter-chr p21.2 Tumor suppressor gene q26.2 115261 ChimerSeq ChiTaRs ChiTaRs FAM53B-FAM53B FAM53B chr10 126308133 FAM53B chr10 126307980 Exonic hg19 NA AA292476 Out-of-frame Intra-chr q26.13 q26.13 115262 ChimerSeq ChiTaRs ChiTaRs SDC3-SDC3 SDC3 chr1 31342662 SDC3 chr1 31345788 Exonic hg19 NA BM991776 Out-of-frame Intra-chr p35.2 p35.2 115263 ChimerSeq ChiTaRs ChiTaRs TBL1X-MPP5 TBL1X chrX 9685926 MPP5 chr14 67751528 Exonic hg19 NA M86146 Out-of-frame Inter-chr p22.31 q23.3 115264 ChimerSeq ChiTaRs ChiTaRs TMEM164-HSP90AB1 TMEM164 chrX 109261581 HSP90AB1 chr6 44217556 Exonic hg19 NA BF084206 Out-of-frame Inter-chr q23 p21.1 Oncogene 115265 ChimerSeq ChiTaRs ChiTaRs PPP2CA-SAMD12 PPP2CA chr5 133533005 SAMD12 chr8 119271563 Exonic hg19 NA DB352016 Out-of-frame Inter-chr q31.1 Tumor suppressor gene q24.12 115266 ChimerSeq ChiTaRs ChiTaRs EPC1-BMPR2 EPC1 chr10 32598519 BMPR2 chr2 203427277 Exonic hg19 NA CB052856 Out-of-frame Inter-chr p11.22 q33.1 TKL:STKR Tumor suppressor gene 115267 ChimerSeq ChiTaRs ChiTaRs COL3A1-DYNC1H1 COL3A1 chr2 189875519 DYNC1H1 chr14 102483110 Exonic hg19 NA BE838936 Out-of-frame Inter-chr q32.2 q32.31 115268 ChimerSeq ChiTaRs ChiTaRs NUCKS1-NUCKS1 NUCKS1 chr1 205686751 NUCKS1 chr1 205685390 Exonic hg19 NA AA713656 Out-of-frame Intra-chr q32.1 q32.1 115269 ChimerSeq ChiTaRs ChiTaRs HTN3-RIMS1 HTN3 chr4 70902151 RIMS1 chr6 73101663 Exonic hg19 NA BP334116 Out-of-frame Inter-chr q13 115270 ChimerSeq ChiTaRs ChiTaRs NEFL-CACNA2D3 NEFL chr8 24811237 CACNA2D3 chr3 54660646 Exonic hg19 NA EB387086 Out-of-frame Inter-chr p21.2 p21.1 Tumor suppressor gene 115271 ChimerSeq ChiTaRs ChiTaRs IPP-DTX2P1-UPK3BP1-PMS2P11 IPP chr1 46183666 DTX2P1-UPK3BP1-PMS2P11 chr7 76661258 Exonic hg19 NA AA321826 Out-of-frame Inter-chr p34.1 q11.23 115272 ChimerSeq ChiTaRs ChiTaRs TATDN3-LARP4 TATDN3 chr1 212989497 LARP4 chr12 50833869 Exonic hg19 NA AA946586 Out-of-frame Inter-chr q32.3 q13.12 115273 ChimerSeq ChiTaRs ChiTaRs AGXT2L2-MBP AGXT2L2 chr5 177638721 MBP chr18 74692253 Exonic hg19 NA BI027996 Out-of-frame Inter-chr q23 115274 ChimerSeq ChiTaRs ChiTaRs RAPGEF6-CRCP RAPGEF6 chr5 130994821 CRCP chr7 65579863 Exonic hg19 NA BE261476 Out-of-frame Inter-chr q31.1 q11.21 115275 ChimerSeq ChiTaRs ChiTaRs PIM1-GBF1 PIM1 chr6 37143202 GBF1 chr10 104116494 Exonic hg19 NA AI536746 Out-of-frame Inter-chr p21.2 CAMK:PIM Oncogene q24.32 115276 ChimerSeq ChiTaRs ChiTaRs TXNDC9-MLEC TXNDC9 chr2 99977642 MLEC chr12 121137167 Exonic hg19 NA AI651406 Out-of-frame Inter-chr q11.2 q24.31 115277 ChimerSeq ChiTaRs ChiTaRs RNF44-PVT1 RNF44 chr5 175958652 PVT1 chr8 128866077 Exonic hg19 NA BI029096 Out-of-frame Inter-chr q35.2 q24.21 115278 ChimerSeq ChiTaRs ChiTaRs CPT2-CPT2 CPT2 chr1 53679247 CPT2 chr1 53679197 Exonic hg19 NA AA531596 Out-of-frame Intra-chr p32.3 p32.3 115279 ChimerSeq ChiTaRs ChiTaRs SPTBN1-SPTBN1 SPTBN1 chr2 54895770 SPTBN1 chr2 54876924 Exonic hg19 NA AA262426 Out-of-frame Intra-chr p16.2 Tumor suppressor gene p16.2 Tumor suppressor gene 115280 ChimerSeq ChiTaRs ChiTaRs VGLL4-VGLL4 VGLL4 chr3 11640550 VGLL4 chr3 11640546 Exonic hg19 NA BF854976 Out-of-frame Intra-chr p25.2 p25.2 115281 ChimerSeq ChiTaRs ChiTaRs EIF3B-EIF3B EIF3B chr7 2418402 EIF3B chr7 2418354 Exonic hg19 NA BG253176 Out-of-frame Intra-chr p22.3 p22.3 115282 ChimerSeq ChiTaRs ChiTaRs UBE2Q1-UBE2Q1 UBE2Q1 chr1 154523885 UBE2Q1 chr1 154522435 Exonic hg19 NA AV753456 Out-of-frame Intra-chr q21.3 q21.3 115283 ChimerSeq ChiTaRs ChiTaRs NPHP4-NPHP4 NPHP4 chr1 6046302 NPHP4 chr1 5987720 Exonic hg19 NA BF915896 Out-of-frame Intra-chr p36.31 p36.31 115284 ChimerSeq ChiTaRs ChiTaRs BPHL-BPHL BPHL chr6 3119075 BPHL chr6 3127582 Exonic hg19 NA BF448366 Out-of-frame Intra-chr p25.2 p25.2 115285 ChimerSeq ChiTaRs ChiTaRs CDK6-SLC25A13 CDK6 chr7 92352566 SLC25A13 chr7 95766458 Exonic hg19 NA BI480726 Out-of-frame Intra-chr q21.2 CMGC:CDK Oncogene Tumor suppressor gene q21.3 115286 ChimerSeq ChiTaRs ChiTaRs MLLT10-SGMS1 MLLT10 chr10 22023574 SGMS1 chr10 52066624 Exonic hg19 NA BF845226 Out-of-frame Intra-chr p12.31 Oncogene q11.23 Tumor suppressor gene 115287 ChimerSeq ChiTaRs ChiTaRs E2F6-HLA-DRB1 E2F6 chr2 11600283 HLA-DRB1 chr6 3934130 Exonic hg19 NA BQ029286 Out-of-frame Inter-chr p25.1 Transcription factor p21.32 115288 ChimerSeq ChiTaRs ChiTaRs CLIP4-SETD5 CLIP4 chr2 29339685 SETD5 chr3 9519100 Exonic hg19 NA BE837056 Out-of-frame Inter-chr p23.2 p25.3 115289 ChimerSeq ChiTaRs ChiTaRs BLK-BLK BLK chr8 11419804 BLK chr8 11419808 Exonic hg19 NA AW737026 Out-of-frame Intra-chr p23.1 TK:Src p23.1 TK:Src 115290 ChimerSeq ChiTaRs ChiTaRs GIGYF2-GIGYF2 GIGYF2 chr2 233715019 GIGYF2 chr2 233680416 Exonic hg19 NA Z78386 Out-of-frame Intra-chr q37.1 q37.1 115291 ChimerSeq ChiTaRs ChiTaRs HDAC3-S100B HDAC3 chr5 141004802 S100B chr21 48019141 Exonic hg19 NA AV717686 Out-of-frame Inter-chr q31.3 Tumor suppressor gene q22.3 115292 ChimerSeq ChiTaRs ChiTaRs KAZN-LLGL2 KAZN chr1 15071758 LLGL2 chr17 73570423 Exonic hg19 NA AW002886 Out-of-frame Inter-chr p36.21 q25.1 115293 ChimerSeq ChiTaRs ChiTaRs PTK7-PTK7 PTK7 chr6 43129190 PTK7 chr6 43098312 Exonic hg19 NA AA490376 Out-of-frame Intra-chr p21.1 p21.1 115294 ChimerSeq ChiTaRs ChiTaRs EXOC4-CSRNP2 EXOC4 chr7 133381183 CSRNP2 chr12 51455781 Exonic hg19 NA AW579506 Out-of-frame Inter-chr q33 q13.12 Transcription factor 115295 ChimerSeq ChiTaRs ChiTaRs SFPQ-SFPQ SFPQ chr1 35656449 SFPQ chr1 35652657 Exonic hg19 NA BE926576 Out-of-frame Intra-chr p34.3 p34.3 115296 ChimerSeq ChiTaRs ChiTaRs SLC9A9-TNRC6A SLC9A9 chr3 143030963 TNRC6A chr16 24769504 Exonic hg19 NA CV353496 Out-of-frame Inter-chr q24 p12.1 115297 ChimerSeq ChiTaRs ChiTaRs GOLPH3-HNRNPC GOLPH3 chr5 32158632 HNRNPC chr14 21727739 Exonic hg19 NA CV404756 Out-of-frame Inter-chr p13.3 q11.2 115298 ChimerSeq ChiTaRs ChiTaRs BTG2-BTG2 BTG2 chr1 203277429 BTG2 chr1 203277869 Exonic hg19 NA BE935216 Out-of-frame Intra-chr q32.1 Tumor suppressor gene q32.1 Tumor suppressor gene 115299 ChimerSeq ChiTaRs ChiTaRs SF3B1-KIAA1191 SF3B1 chr2 198299732 KIAA1191 chr5 175773217 Exonic hg19 NA BG573946 Out-of-frame Inter-chr q33.1 Oncogene q35.2 115300 ChimerSeq ChiTaRs ChiTaRs AGRN-RPL13 AGRN chr1 991489 RPL13 chr16 89628763 Exonic hg19 NA BG423236 Out-of-frame Inter-chr p36.33 q24.3 115301 ChimerSeq ChiTaRs ChiTaRs RPL8-ACIN1 RPL8 chr8 146017762 ACIN1 chr14 23531631 Exonic hg19 NA CX752756 Out-of-frame Inter-chr q24.3 q11.2 115302 ChimerSeq ChiTaRs ChiTaRs SPTLC1-SPTLC1 SPTLC1 chr9 94821587 SPTLC1 chr9 94842298 Exonic hg19 NA BF803026 Out-of-frame Intra-chr q22.31 q22.31 115303 ChimerSeq ChiTaRs ChiTaRs KAT2B-CNIH2 KAT2B chr3 20120316 CNIH2 chr11 66051619 Exonic hg19 NA BI912966 Out-of-frame Inter-chr p24.3 q13.2 115304 ChimerSeq ChiTaRs ChiTaRs AMPD3-MAN1B1 AMPD3 chr11 10495037 MAN1B1 chr9 139981514 Exonic hg19 NA BF915326 Out-of-frame Inter-chr p15.4 q34.3 115305 ChimerSeq ChiTaRs ChiTaRs RGS3-GOLM1 RGS3 chr9 116292479 GOLM1 chr9 88655741 Exonic hg19 NA BG985226 Out-of-frame Intra-chr q32 q21.33 115306 ChimerSeq ChiTaRs ChiTaRs EPB41L2-RXRG EPB41L2 chr6 131160848 RXRG chr1 165370350 Exonic hg19 NA BM714636 Out-of-frame Inter-chr q23.2 q23.3 Transcription factor 115307 ChimerSeq ChiTaRs ChiTaRs LOC440934-GSG1 LOC440934 chr2 223186375 GSG1 chr12 13241798 Exonic hg19 NA AI016246 Out-of-frame Inter-chr p13.1 115308 ChimerSeq ChiTaRs ChiTaRs IGFBP3-IGFBP3 IGFBP3 chr7 45954452 IGFBP3 chr7 45956244 Exonic hg19 NA DA554686 Out-of-frame Intra-chr p12.3 Tumor suppressor gene p12.3 Tumor suppressor gene 115309 ChimerSeq ChiTaRs ChiTaRs NUDT3-CHD3 NUDT3 chr6 34309677 CHD3 chr17 7806718 Exonic hg19 NA BF737506 Out-of-frame Inter-chr p21.31 p13.1 115310 ChimerSeq ChiTaRs ChiTaRs SACM1L-SACM1L SACM1L chr3 45785085 SACM1L chr3 45785077 Exonic hg19 NA CA949726 Out-of-frame Intra-chr p21.31 p21.31 115311 ChimerSeq ChiTaRs ChiTaRs PDSS2-PDSS2 PDSS2 chr6 107474000 PDSS2 chr6 107474439 Exonic hg19 NA CA313496 Out-of-frame Intra-chr q21 Tumor suppressor gene q21 Tumor suppressor gene 115312 ChimerSeq ChiTaRs ChiTaRs GDAP2-GDAP2 GDAP2 chr1 118406729 GDAP2 chr1 118406425 Exonic hg19 NA BE064706 Out-of-frame Intra-chr p12 p12 115313 ChimerSeq ChiTaRs ChiTaRs TCTN3-WWOX TCTN3 chr10 97446847 WWOX chr16 78495424 Exonic hg19 NA AW576726 Out-of-frame Inter-chr q24.1 q23.1 Tumor suppressor gene 115314 ChimerSeq ChiTaRs ChiTaRs RAI14-RAI14 RAI14 chr5 34832717 RAI14 chr5 34832464 Exonic hg19 NA CA313526 3'UTR-3'UTR Intra-chr p13.2 p13.2 115315 ChimerSeq ChiTaRs ChiTaRs EZH2-EZH2 EZH2 chr7 148508935 EZH2 chr7 148507292 Exonic hg19 NA BF223536 Out-of-frame Intra-chr q36.1 Oncogene Tumor suppressor gene q36.1 Oncogene Tumor suppressor gene 115316 ChimerSeq ChiTaRs ChiTaRs EPC2-PAN3 EPC2 chr2 149523284 PAN3 chr13 28778207 Exonic hg19 NA CV341936 Out-of-frame Inter-chr q23.1 q12.2 115317 ChimerSeq ChiTaRs ChiTaRs IDS-IDS IDS chrX 148564400 IDS chrX 148564409 Exonic hg19 NA CB306816 Out-of-frame Intra-chr q28 q28 115318 ChimerSeq ChiTaRs ChiTaRs LOC100506776-TRGC2 LOC100506776 chr7 38390056 TRGC2 chr7 38289124 Exonic hg19 NA M27346 Out-of-frame Intra-chr p14.1 115319 ChimerSeq ChiTaRs ChiTaRs AMBRA1-ZFHX4 AMBRA1 chr11 46497006 ZFHX4 chr8 77699520 Exonic hg19 NA AW389896 Out-of-frame Inter-chr p11.2 q21.13 Transcription factor 115320 ChimerSeq ChiTaRs ChiTaRs PSMB7-PSMB7 PSMB7 chr9 127177699 PSMB7 chr9 127119052 Exonic hg19 NA BQ424626 Out-of-frame Intra-chr q33.3 q33.3 115321 ChimerSeq ChiTaRs ChiTaRs ZNF197-ZNF197 ZNF197 chr3 44683481 ZNF197 chr3 44670762 Exonic hg19 NA BI057816 Out-of-frame Intra-chr Transcription factor Transcription factor 115322 ChimerSeq ChiTaRs ChiTaRs MERTK-MERTK MERTK chr2 112663812 MERTK chr2 112664099 Exonic hg19 NA BE178416 Out-of-frame Intra-chr q13 q13 115323 ChimerSeq ChiTaRs ChiTaRs BBS5-KIAA1328 BBS5 chr2 170356083 KIAA1328 chr18 34567651 Exonic hg19 NA BQ356256 Out-of-frame Inter-chr q31.1 q12.2 115324 ChimerSeq ChiTaRs ChiTaRs SH3BP5-SLCO1A2 SH3BP5 chr3 15369040 SLCO1A2 chr12 21531983 Exonic hg19 NA BP384906 Out-of-frame Inter-chr p25.1 p12.1 115325 ChimerSeq ChiTaRs ChiTaRs TNS1-RPL41 TNS1 chr2 218694896 RPL41 chr12 56510562 Exonic hg19 NA AI174756 Out-of-frame Inter-chr q35 q13.2 115326 ChimerSeq ChiTaRs ChiTaRs BAALC-RGS12 BAALC chr8 104178221 RGS12 chr4 3389909 Exonic hg19 NA BI058636 Out-of-frame Inter-chr q22.3 p16.3 115327 ChimerSeq ChiTaRs ChiTaRs DPYD-NRIP3 DPYD chr1 98049359 NRIP3 chr11 9002563 Exonic hg19 NA BI603836 Out-of-frame Inter-chr p21.3 Oncogene p15.4 115328 ChimerSeq ChiTaRs ChiTaRs AFF1-ARHGAP17 AFF1 chr4 87928684 ARHGAP17 chr16 24942612 Exonic hg19 NA BI030606 Out-of-frame Inter-chr q21.3 Oncogene p12.1 115329 ChimerSeq ChiTaRs ChiTaRs CADM2-FTX CADM2 chr3 85310733 FTX chrX 73464317 Exonic hg19 NA BF230016 Out-of-frame Inter-chr p12.1 Tumor suppressor gene q13.2 115330 ChimerSeq ChiTaRs ChiTaRs ASAP1-ROBO2 ASAP1 chr8 131419256 ROBO2 chr3 77402910 Exonic hg19 NA CK902636 Out-of-frame Inter-chr q24.22 p12.3 115331 ChimerSeq ChiTaRs ChiTaRs EDARADD-OSMR EDARADD chr1 236619703 OSMR chr5 38904711 Exonic hg19 NA BF379986 Out-of-frame Inter-chr q42.3 p13.1 115332 ChimerSeq ChiTaRs ChiTaRs ALDH1A1-ALDH1A1 ALDH1A1 chr9 75543894 ALDH1A1 chr9 75545800 Exonic hg19 NA BQ317586 Out-of-frame Intra-chr q21.13 q21.13 115333 ChimerSeq ChiTaRs ChiTaRs ADAM12-PACSIN2 ADAM12 chr10 127774926 PACSIN2 chr22 43404557 Exonic hg19 NA BG002846 Out-of-frame Inter-chr q26.2 q13.2 115334 ChimerSeq ChiTaRs ChiTaRs DENND1A-DENND1A DENND1A chr9 126284700 DENND1A chr9 126284418 Exonic hg19 NA BI053116 Out-of-frame Intra-chr q33.3 q33.3 115335 ChimerSeq ChiTaRs ChiTaRs PRDX1-PRDX1 PRDX1 chr1 45980245 PRDX1 chr1 45981369 Exonic hg19 NA CN267646 Out-of-frame Intra-chr p34.1 p34.1 115336 ChimerSeq ChiTaRs ChiTaRs ARNTL-ARNTL ARNTL chr11 13408813 ARNTL chr11 13408336 Exonic hg19 NA CA310696 Out-of-frame Intra-chr p15.3 Tumor suppressor gene Transcription factor p15.3 Tumor suppressor gene Transcription factor 115337 ChimerSeq ChiTaRs ChiTaRs DDX21-DDX21 DDX21 chr10 70726950 DDX21 chr10 70723127 Exonic hg19 NA AA133576 Out-of-frame Intra-chr q22.1 q22.1 115338 ChimerSeq ChiTaRs ChiTaRs ERCC6-CEP350 ERCC6 chr10 50678306 CEP350 chr1 180081052 Exonic hg19 NA BF094116 Out-of-frame Inter-chr q11.23 q25.2 115339 ChimerSeq ChiTaRs ChiTaRs NFE2L2-CSAD NFE2L2 chr2 178112110 CSAD chr12 53552222 Exonic hg19 NA AI032646 Out-of-frame Inter-chr q31.2 Oncogene Transcription factor q13.13 115340 ChimerSeq ChiTaRs ChiTaRs LOC654342-LOC654342 LOC654342 chr2 91811305 LOC654342 chr2 91811945 Exonic hg19 NA CA419776 Out-of-frame Intra-chr 115341 ChimerSeq ChiTaRs ChiTaRs CXCL9-CARD6 CXCL9 chr4 76927415 CARD6 chr5 40842770 Exonic hg19 NA AW801916 Out-of-frame Inter-chr q21.1 p13.1 115342 ChimerSeq ChiTaRs ChiTaRs CELF2-AARSD1 CELF2 chr10 11375540 AARSD1 chr17 41108518 Exonic hg19 NA AI916936 Out-of-frame Inter-chr p14 q21.31 115343 ChimerSeq ChiTaRs ChiTaRs IDH1-MBOAT2 IDH1 chr2 209101195 MBOAT2 chr2 9077895 Exonic hg19 NA AW001546 Out-of-frame Intra-chr q34 Oncogene Tumor suppressor gene p25.1 115344 ChimerSeq ChiTaRs ChiTaRs SLC20A2-CYB5A SLC20A2 chr8 42274318 CYB5A chr18 71920531 Exonic hg19 NA AI207656 Out-of-frame Inter-chr p11.21 q22.3 Tumor suppressor gene 115345 ChimerSeq ChiTaRs ChiTaRs RASSF1-CAPN1 RASSF1 chr3 50375312 CAPN1 chr11 64978837 Exonic hg19 NA BI013636 Out-of-frame Inter-chr p21.31 Tumor suppressor gene q13.1 115346 ChimerSeq ChiTaRs ChiTaRs PRRC2B-PRRC2B PRRC2B chr9 134298402 PRRC2B chr9 134297712 Exonic hg19 NA BF733026 Out-of-frame Intra-chr q34.13 q34.13 115347 ChimerSeq ChiTaRs ChiTaRs NBPF11-NBPF14 NBPF11 chr1 147931846 NBPF14 chr1 145004781 Exonic hg19 NA BC046646 Out-of-frame Intra-chr q21.2 q21.2 115348 ChimerSeq ChiTaRs ChiTaRs LOC100131564-LOC100131564 LOC100131564 chr1 93796819 LOC100131564 chr1 93796547 Exonic hg19 NA AA837596 Out-of-frame Intra-chr 115349 ChimerSeq ChiTaRs ChiTaRs C9orf78-SRSF11 C9orf78 chr9 132590057 SRSF11 chr1 70714522 Exonic hg19 NA AI917006 Out-of-frame Inter-chr q34.11 p31.1 115350 ChimerSeq ChiTaRs ChiTaRs CCNI-CTSZ CCNI chr4 77997136 CTSZ chr20 57570314 Exonic hg19 NA AF032906 Out-of-frame Inter-chr q21.1 q13.32 115351 ChimerSeq ChiTaRs ChiTaRs MCL1-MCL1 MCL1 chr1 150547280 MCL1 chr1 150547034 Exonic hg19 NA AW019996 Out-of-frame Intra-chr q21.2 Oncogene q21.2 Oncogene 115352 ChimerSeq ChiTaRs ChiTaRs UBE2H-RBFOX1 UBE2H chr7 129535394 RBFOX1 chr16 6176974 Exonic hg19 NA CD653316 Out-of-frame Inter-chr q32.2 p13.3 115353 ChimerSeq ChiTaRs ChiTaRs STAG2-STAG2 STAG2 chrX 123105985 STAG2 chrX 123104349 Exonic hg19 NA BE072226 Out-of-frame Intra-chr q25 Oncogene q25 Oncogene 115354 ChimerSeq ChiTaRs ChiTaRs CD99L2-CD99L2 CD99L2 chrX 149935297 CD99L2 chrX 149934814 Exonic hg19 NA BG252856 Out-of-frame Intra-chr q28 q28 115355 ChimerSeq ChiTaRs ChiTaRs LIMCH1-LIMCH1 LIMCH1 chr4 41701335 LIMCH1 chr4 41701411 Exonic hg19 NA BU675776 Out-of-frame Intra-chr p13 p13 115356 ChimerSeq ChiTaRs ChiTaRs MIR34A-BOLA2 MIR34A chr1 9228232 BOLA2 chr16 30005859 Exonic hg19 NA BI013096 Out-of-frame Inter-chr p36.22 Tumor suppressor gene p11.2 115357 ChimerSeq ChiTaRs ChiTaRs WDR48-WDR48 WDR48 chr3 39137893 WDR48 chr3 39137316 Exonic hg19 NA BU675916 Out-of-frame Intra-chr p22.2 Tumor suppressor gene p22.2 Tumor suppressor gene 115358 ChimerSeq ChiTaRs ChiTaRs MIR548O2-GOLGA4 MIR548O2 chr8 30105495 GOLGA4 chr3 37368982 Exonic hg19 NA BF436416 Out-of-frame Inter-chr q11.23 p22.2 115359 ChimerSeq ChiTaRs ChiTaRs NINJ1-TRMT61A NINJ1 chr9 95883840 TRMT61A chr14 103996511 Exonic hg19 NA AA429416 Out-of-frame Inter-chr q22.31 Tumor suppressor gene q32.33 115360 ChimerSeq ChiTaRs ChiTaRs STRN-MRPL9 STRN chr2 37072273 MRPL9 chr1 151734614 Exonic hg19 NA BM837406 Out-of-frame Inter-chr p22.2 q21.3 115361 ChimerSeq ChiTaRs ChiTaRs DENND3-DENND3 DENND3 chr8 142203974 DENND3 chr8 142202644 Exonic hg19 NA AA449866 Out-of-frame Intra-chr q24.3 q24.3 115362 ChimerSeq ChiTaRs ChiTaRs GANAB-GANAB GANAB chr11 62392861 GANAB chr11 62392952 Exonic hg19 NA BE710656 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q12.3 Tumor suppressor gene 115363 ChimerSeq ChiTaRs ChiTaRs PTPRZ1-PIN1 PTPRZ1 chr7 121538086 PIN1 chr19 9948823 Exonic hg19 NA AA442546 Out-of-frame Inter-chr q31.32 p13.2 Tumor suppressor gene Transcription factor 115364 ChimerSeq ChiTaRs ChiTaRs CIAO1-CLCN2 CIAO1 chr2 96937297 CLCN2 chr3 184076564 Exonic hg19 NA AA451826 Out-of-frame Inter-chr q11.2 q27.1 115365 ChimerSeq ChiTaRs ChiTaRs GPR107-AAK1 GPR107 chr9 132902397 AAK1 chr2 69708224 Exonic hg19 NA BF934986 Out-of-frame Inter-chr q34.11 p13.3 Other:NAK 115366 ChimerSeq ChiTaRs ChiTaRs RPL7L1-CRYBB2P1 RPL7L1 chr6 42855072 CRYBB2P1 chr22 25855943 Exonic hg19 NA BC014216 Out-of-frame Inter-chr p21.1 q11.23 115367 ChimerSeq ChiTaRs ChiTaRs EIF1B-EIF1B EIF1B chr3 40353842 EIF1B chr3 40351390 Exonic hg19 NA AA740716 Out-of-frame Intra-chr p22.1 p22.1 115368 ChimerSeq ChiTaRs ChiTaRs SCN2A-ADD3 SCN2A chr2 166186065 ADD3 chr10 111773642 Exonic hg19 NA BF944956 Out-of-frame Inter-chr q24.3 q25.1 115369 ChimerSeq ChiTaRs ChiTaRs CENPP-CENPP CENPP chr9 95146355 CENPP chr9 95146325 Exonic hg19 NA BI494156 Out-of-frame Intra-chr q22.31 q22.31 115370 ChimerSeq ChiTaRs ChiTaRs RBM6-ZNF512B RBM6 chr3 50114682 ZNF512B chr20 62598715 Exonic hg19 NA BQ448366 Out-of-frame Inter-chr p21.31 Tumor suppressor gene q13.33 Transcription factor 115371 ChimerSeq ChiTaRs ChiTaRs FAM219A-PPP4R1L FAM219A chr9 34399641 PPP4R1L chr20 56842959 Exonic hg19 NA BF952326 Out-of-frame Inter-chr p13.3 q13.32 115372 ChimerSeq ChiTaRs ChiTaRs LOC100289187-PDILT LOC100289187 chr7 99204497 PDILT chr16 20410477 Exonic hg19 NA DB054606 Out-of-frame Inter-chr p12.3 115373 ChimerSeq ChiTaRs ChiTaRs AGRN-AGRN AGRN chr1 987189 AGRN chr1 983716 Exonic hg19 NA CK000816 Out-of-frame Intra-chr p36.33 p36.33 115374 ChimerSeq ChiTaRs ChiTaRs IFNGR1-IFNGR1 IFNGR1 chr6 137523372 IFNGR1 chr6 137523115 Exonic hg19 NA BU677116 Out-of-frame Intra-chr q23.3 q23.3 115375 ChimerSeq ChiTaRs ChiTaRs XPO7-DAB1 XPO7 chr8 21790103 DAB1 chr1 58995981 Exonic hg19 NA DB319216 Out-of-frame Inter-chr p21.3 p32.1 115376 ChimerSeq ChiTaRs ChiTaRs HSPA4-HSPA4 HSPA4 chr5 132440166 HSPA4 chr5 132426925 Exonic hg19 NA CA428616 Out-of-frame Intra-chr q31.1 q31.1 115377 ChimerSeq ChiTaRs ChiTaRs TREX1-TREX1 TREX1 chr3 48508537 TREX1 chr3 48508542 Exonic hg19 NA BG981046 Out-of-frame Intra-chr p21.31 p21.31 115378 ChimerSeq ChiTaRs ChiTaRs TAB2-SLTM TAB2 chr6 149731917 SLTM chr15 59181668 Exonic hg19 NA AW379046 Out-of-frame Inter-chr q25.1 q22.1 115379 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-TAPBP INS-IGF2 chr11 2181065 TAPBP chr6 4505306 Exonic hg19 NA BQ100666 Out-of-frame Inter-chr p15.5 Oncogene 115380 ChimerSeq ChiTaRs ChiTaRs PLP2-PLP2 PLP2 chrX 49031102 PLP2 chrX 49031205 Exonic hg19 NA BE076666 Out-of-frame Intra-chr p11.23 p11.23 115381 ChimerSeq ChiTaRs ChiTaRs AMT-SMTN AMT chr3 49454385 SMTN chr22 31500349 Exonic hg19 NA DB332956 Out-of-frame Inter-chr p21.31 q12.2 115382 ChimerSeq ChiTaRs ChiTaRs PMPCA-GATAD2A PMPCA chr9 139318212 GATAD2A chr19 19619679 Exonic hg19 NA M78956 Out-of-frame Inter-chr q34.3 p13.11 Transcription factor 115383 ChimerSeq ChiTaRs ChiTaRs ZMIZ1-ANAPC2 ZMIZ1 chr10 80879977 ANAPC2 chr9 140073844 Exonic hg19 NA BI058046 Out-of-frame Inter-chr q22.3 q34.3 115384 ChimerSeq ChiTaRs ChiTaRs HLA-DPA1-HLA-DPA1 HLA-DPA1 chr6 4517085 HLA-DPA1 chr6 4265296 Exonic hg19 NA AA744436 Out-of-frame Intra-chr 115385 ChimerSeq ChiTaRs ChiTaRs SSR3-KIF3B SSR3 chr3 156258158 KIF3B chr20 30920907 Exonic hg19 NA AI096496 Out-of-frame Inter-chr q25.31 q11.21 115386 ChimerSeq ChiTaRs ChiTaRs GARNL3-GARNL3 GARNL3 chr9 130131294 GARNL3 chr9 130134714 Exonic hg19 NA T05476 Out-of-frame Intra-chr q33.3 q33.3 115387 ChimerSeq ChiTaRs ChiTaRs SLC30A9-SLC30A9 SLC30A9 chr4 42088975 SLC30A9 chr4 42088945 Exonic hg19 NA BM906216 Out-of-frame Intra-chr p13 p13 115388 ChimerSeq ChiTaRs ChiTaRs MLLT3-MLL MLLT3 chr9 20373455 MLL chr11 118359137 Exonic hg19 NA AY282404 Out-of-frame Inter-chr p21.3 q23.3 115389 ChimerSeq ChiTaRs ChiTaRs C1QC-C1QC C1QC chr1 22973955 C1QC chr1 22973940 Exonic hg19 NA BE769806 Out-of-frame Intra-chr p36.12 p36.12 115390 ChimerSeq ChiTaRs ChiTaRs RPL35-C1orf43 RPL35 chr9 127620281 C1orf43 chr1 154184844 Exonic hg19 NA CN394906 Out-of-frame Inter-chr q33.3 q21.3 115391 ChimerSeq ChiTaRs ChiTaRs USP6NL-UPF2 USP6NL chr10 11653614 UPF2 chr10 11998317 Exonic hg19 NA BG385736 Out-of-frame Intra-chr p14 p14 Seq+ 115392 ChimerSeq ChiTaRs ChiTaRs ERBB2IP-ERBB2IP ERBB2IP chr5 65361718 ERBB2IP chr5 65363464 Exonic hg19 NA BQ342476 Out-of-frame Intra-chr 115393 ChimerSeq ChiTaRs ChiTaRs EIF2B5-EIF2B5 EIF2B5 chr3 183860115 EIF2B5 chr3 183858403 Exonic hg19 NA BM011896 Out-of-frame Intra-chr q27.1 q27.1 115394 ChimerSeq ChiTaRs ChiTaRs PRICKLE4-LDB1 PRICKLE4 chr6 41757589 LDB1 chr10 103867564 Exonic hg19 NA BE716596 Out-of-frame Inter-chr p21.1 q24.32 115395 ChimerSeq ChiTaRs ChiTaRs BIN1-TLE2 BIN1 chr2 127830315 TLE2 chr19 3005524 Exonic hg19 NA BE839306 Out-of-frame Inter-chr q14.3 Tumor suppressor gene p13.3 115396 ChimerSeq ChiTaRs ChiTaRs MSS51-LAS1L MSS51 chr10 75187106 LAS1L chrX 64741196 Exonic hg19 NA AK129496 Out-of-frame Inter-chr q22.2 q12 115397 ChimerSeq ChiTaRs ChiTaRs AOAH-GUSBP3 AOAH chr7 36557833 GUSBP3 chr5 69414291 Exonic hg19 NA BI019996 Out-of-frame Inter-chr p14.2 q13.2 115398 ChimerSeq ChiTaRs ChiTaRs PLCE1-PLCE1 PLCE1 chr10 96013085 PLCE1 chr10 96008147 Exonic hg19 NA AK025366 Out-of-frame Intra-chr q23.33 Tumor suppressor gene q23.33 Tumor suppressor gene 115399 ChimerSeq ChiTaRs ChiTaRs S100A16-HTATSF1 S100A16 chr1 153579487 HTATSF1 chrX 135593590 Exonic hg19 NA AI343506 Out-of-frame Inter-chr q21.3 q26.3 115400 ChimerSeq ChiTaRs ChiTaRs GARS-FKBP15 GARS chr7 30673512 FKBP15 chr9 115944272 Exonic hg19 NA T29506 Out-of-frame Inter-chr p14.3 q32 115401 ChimerSeq ChiTaRs ChiTaRs KIAA0368-KIAA0368 KIAA0368 chr9 114124674 KIAA0368 chr9 114124522 Exonic hg19 NA AW805636 Out-of-frame Intra-chr q31.3 q31.3 115402 ChimerSeq ChiTaRs ChiTaRs SHC1-CDH18 SHC1 chr1 154934920 CDH18 chr5 19835564 Exonic hg19 NA CD238366 Out-of-frame Inter-chr q21.3 p14.3 115403 ChimerSeq ChiTaRs ChiTaRs NR1D2-MDC1 NR1D2 chr3 24021321 MDC1 chr6 2005041 Exonic hg19 NA BF802516 Out-of-frame Inter-chr p24.2 Transcription factor Tumor suppressor gene 115404 ChimerSeq ChiTaRs ChiTaRs IL20RA-ATP6V0E2 IL20RA chr6 137322814 ATP6V0E2 chr7 149576547 Exonic hg19 NA AA528216 Out-of-frame Inter-chr q23.3 q36.1 115405 ChimerSeq ChiTaRs ChiTaRs PRKAR2A-MRPS5 PRKAR2A chr3 48788469 MRPS5 chr2 95780958 Exonic hg19 NA BG990796 Out-of-frame Inter-chr p21.31 q11.1 115406 ChimerSeq ChiTaRs ChiTaRs UHRF1BP1-UHRF1BP1 UHRF1BP1 chr6 34826671 UHRF1BP1 chr6 34826652 Exonic hg19 NA AL045936 Out-of-frame Intra-chr p21.31 p21.31 115407 ChimerSeq ChiTaRs ChiTaRs LMO4-LMO4 LMO4 chr1 87805839 LMO4 chr1 87810530 Exonic hg19 NA BF834546 Out-of-frame Intra-chr p22.3 p22.3 115408 ChimerSeq ChiTaRs ChiTaRs C6orf48-PTMA C6orf48 chr6 3096426 PTMA chr2 232576612 Exonic hg19 NA BG531546 Out-of-frame Inter-chr q37.1 115409 ChimerSeq ChiTaRs ChiTaRs KAT6A-KAT6A KAT6A chr8 41895620 KAT6A chr8 41850830 Exonic hg19 NA AA868356 Out-of-frame Intra-chr p11.21 Oncogene p11.21 Oncogene 115410 ChimerSeq ChiTaRs ChiTaRs FLJ23867-FLJ23867 FLJ23867 chr1 180168963 FLJ23867 chr1 180168305 Exonic hg19 NA AW857936 Out-of-frame Intra-chr 115411 ChimerSeq ChiTaRs ChiTaRs COL12A1-TMC5 COL12A1 chr6 75796003 TMC5 chr16 19462088 Exonic hg19 NA BM987506 Out-of-frame Inter-chr q14.1 p12.3 115412 ChimerSeq ChiTaRs ChiTaRs AP1AR-SRSF7 AP1AR chr4 113184184 SRSF7 chr2 38972038 Exonic hg19 NA AK094126 Out-of-frame Inter-chr q25 p22.1 115413 ChimerSeq ChiTaRs ChiTaRs MAPK9-S100A6 MAPK9 chr5 179660683 S100A6 chr1 153507760 Exonic hg19 NA BI963166 Out-of-frame Inter-chr q35.3 Tumor suppressor gene q21.3 115414 ChimerSeq ChiTaRs ChiTaRs DNAJC1-DNAJC1 DNAJC1 chr10 22198920 DNAJC1 chr10 22199063 Exonic hg19 NA AK129626 Out-of-frame Intra-chr p12.31 p12.31 115415 ChimerSeq ChiTaRs ChiTaRs PKP4-MAP4K4 PKP4 chr2 159537467 MAP4K4 chr2 102480029 Exonic hg19 NA AW896076 Out-of-frame Intra-chr q24.1 q11.2 115416 ChimerSeq ChiTaRs ChiTaRs ZEB2-RBFOX1 ZEB2 chr2 145156278 RBFOX1 chr16 7055493 Exonic hg19 NA BF948186 Out-of-frame Inter-chr q22.3 Transcription factor p13.3 115417 ChimerSeq ChiTaRs ChiTaRs CUL3-CUL3 CUL3 chr2 225337789 CUL3 chr2 225337470 Exonic hg19 NA BQ231996 Out-of-frame Intra-chr q36.2 q36.2 115418 ChimerSeq ChiTaRs ChiTaRs LOC440944-LOC440944 LOC440944 chr3 9412911 LOC440944 chr3 9412913 Exonic hg19 NA BE160776 Out-of-frame Intra-chr 115419 ChimerSeq ChiTaRs ChiTaRs CCDC69-SLC35D2 CCDC69 chr5 150581162 SLC35D2 chr9 99107617 Exonic hg19 NA BF085006 Out-of-frame Inter-chr q33.1 q22.32 115420 ChimerSeq ChiTaRs ChiTaRs CDC42EP3-CDC42EP3 CDC42EP3 chr2 37872398 CDC42EP3 chr2 37872498 Exonic hg19 NA BU177566 Out-of-frame Intra-chr p22.2 p22.2 115421 ChimerSeq ChiTaRs ChiTaRs PPP1R11-PPP1R11 PPP1R11 chr6 1330768 PPP1R11 chr6 1330882 Exonic hg19 NA BU182636 Out-of-frame Intra-chr 115422 ChimerSeq ChiTaRs ChiTaRs SNHG4-MATR3 SNHG4 chr5 138643213 MATR3 chr5 138643210 Exonic hg19 NA AJ224166 Out-of-frame Intra-chr q31.2 q31.2 115423 ChimerSeq ChiTaRs ChiTaRs KLF6-SHPRH KLF6 chr10 3821339 SHPRH chr6 146253257 Exonic hg19 NA DB360426 Out-of-frame Inter-chr p15.2 Oncogene Tumor suppressor gene Transcription factor q24.3 Tumor suppressor gene 115424 ChimerSeq ChiTaRs ChiTaRs CREB3L4-CREB3L4 CREB3L4 chr1 153946840 CREB3L4 chr1 153946586 Exonic hg19 NA AI620796 5'UTR-CDS Intra-chr q21.3 Transcription factor q21.3 Transcription factor 115425 ChimerSeq ChiTaRs ChiTaRs HADHA-HADHA HADHA chr2 26420647 HADHA chr2 26416589 Exonic hg19 NA BQ330936 Out-of-frame Intra-chr p23.3 p23.3 115426 ChimerSeq ChiTaRs ChiTaRs RNF20-LAMA4 RNF20 chr9 104325624 LAMA4 chr6 112534922 Exonic hg19 NA U77706 Out-of-frame Inter-chr q31.1 q21 115427 ChimerSeq ChiTaRs ChiTaRs DNAJC6-SPAG16 DNAJC6 chr1 65839116 SPAG16 chr2 214177010 Exonic hg19 NA CV343756 Out-of-frame Inter-chr p31.3 q34 115428 ChimerSeq ChiTaRs ChiTaRs CDHR5-SART3 CDHR5 chr11 621218 SART3 chr12 108919999 Exonic hg19 NA BG979986 Out-of-frame Inter-chr q23.3 115429 ChimerSeq ChiTaRs ChiTaRs AIM1-AIM1 AIM1 chr6 107017601 AIM1 chr6 107017555 Exonic hg19 NA CA438996 Out-of-frame Intra-chr 115430 ChimerSeq ChiTaRs ChiTaRs LINC00466-RFC2 LINC00466 chr1 63635878 RFC2 chr7 73646299 Exonic hg19 NA BF056046 Out-of-frame Inter-chr p31.3 q11.23 115431 ChimerSeq ChiTaRs ChiTaRs SGOL2-SAAL1 SGOL2 chr2 201406311 SAAL1 chr11 18101900 Exonic hg19 NA AW182466 Out-of-frame Inter-chr p15.1 115432 ChimerSeq ChiTaRs ChiTaRs SMA4-CCNL2 SMA4 chr5 69916184 CCNL2 chr1 1323911 Exonic hg19 NA AI435556 Out-of-frame Inter-chr p36.33 115433 ChimerSeq ChiTaRs ChiTaRs ROBO1-ROBO1 ROBO1 chr3 78908403 ROBO1 chr3 78909777 Exonic hg19 NA BX101366 Out-of-frame Intra-chr p12.3 Tumor suppressor gene p12.3 Tumor suppressor gene 115434 ChimerSeq ChiTaRs ChiTaRs MOB2-TNFAIP8 MOB2 chr11 1774494 TNFAIP8 chr5 118704541 Exonic hg19 NA BF868816 Out-of-frame Inter-chr p15.5 q23.1 115435 ChimerSeq ChiTaRs ChiTaRs BIRC6-BIRC6 BIRC6 chr2 32731961 BIRC6 chr2 32731469 Exonic hg19 NA BF814796 Out-of-frame Intra-chr p22.3 p22.3 115436 ChimerSeq ChiTaRs ChiTaRs ZCCHC17-TPK1 ZCCHC17 chr1 31819588 TPK1 chr7 144271457 Exonic hg19 NA EC547646 Out-of-frame Inter-chr p35.2 q35 115437 ChimerSeq ChiTaRs ChiTaRs NOL6-NOL6 NOL6 chr9 33462305 NOL6 chr9 33461836 Exonic hg19 NA AA496406 Out-of-frame Intra-chr p13.3 p13.3 115438 ChimerSeq ChiTaRs ChiTaRs PPP3CC-DLC1 PPP3CC chr8 22392911 DLC1 chr8 12959711 Exonic hg19 NA BF358436 Out-of-frame Intra-chr p21.3 Tumor suppressor gene p22 Tumor suppressor gene 115439 ChimerSeq ChiTaRs ChiTaRs DST-DST DST chr6 56494334 DST chr6 56493948 Exonic hg19 NA BG989836 Out-of-frame Intra-chr p12.1 Oncogene p12.1 Oncogene 115440 ChimerSeq ChiTaRs ChiTaRs PEBP4-HYOU1 PEBP4 chr8 22647063 HYOU1 chr11 118925765 Exonic hg19 NA DA760206 Out-of-frame Inter-chr p21.3 115441 ChimerSeq ChiTaRs ChiTaRs NFX1-NFX1 NFX1 chr9 33294452 NFX1 chr9 33294534 Exonic hg19 NA U15306 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Transcription factor 115442 ChimerSeq ChiTaRs ChiTaRs AKIRIN1-AKIRIN1 AKIRIN1 chr1 39458582 AKIRIN1 chr1 39457675 Exonic hg19 NA CB987276 Out-of-frame Intra-chr p34.3 p34.3 115443 ChimerSeq ChiTaRs ChiTaRs CELF2-AHCYL2 CELF2 chr10 11259477 AHCYL2 chr7 129062680 Exonic hg19 NA DB138706 Out-of-frame Inter-chr p14 q32.1 115444 ChimerSeq ChiTaRs ChiTaRs DFFA-ATP11B DFFA chr1 10521403 ATP11B chr3 182575205 Exonic hg19 NA CN266606 Out-of-frame Inter-chr p36.22 Tumor suppressor gene q26.33 Oncogene 115445 ChimerSeq ChiTaRs ChiTaRs HLA-B-HLA-B HLA-B chr6 2656056 HLA-B chr6 2834477 Exonic hg19 NA BF909066 Out-of-frame Intra-chr 115446 ChimerSeq ChiTaRs ChiTaRs VCP-VCP VCP chr9 35062310 VCP chr9 35061579 Exonic hg19 NA T23066 Out-of-frame Intra-chr p13.3 p13.3 115447 ChimerSeq ChiTaRs ChiTaRs C10orf99-UGGT1 C10orf99 chr10 85944737 UGGT1 chr2 128951780 Exonic hg19 NA AK025416 Out-of-frame Inter-chr q23.1 q14.3 115448 ChimerSeq ChiTaRs ChiTaRs PINK1-ARL17A PINK1 chr1 20961662 ARL17A chr17 1505050 Exonic hg19 NA AI174936 Out-of-frame Inter-chr p36.12 Other:NKF2 q21.31 115449 ChimerSeq ChiTaRs ChiTaRs KYNU-KYNU KYNU chr2 143743591 KYNU chr2 143712379 Exonic hg19 NA BF907726 Out-of-frame Intra-chr q22.2 q22.2 115450 ChimerSeq ChiTaRs ChiTaRs PPM1M-PPM1M PPM1M chr3 52280467 PPM1M chr3 52280503 Exonic hg19 NA CR981976 Out-of-frame Intra-chr p21.2 p21.2 115451 ChimerSeq ChiTaRs ChiTaRs FBXL2-FBXL2 FBXL2 chr3 33430929 FBXL2 chr3 33430554 Exonic hg19 NA AW752436 Out-of-frame Intra-chr p22.3 p22.3 115452 ChimerSeq ChiTaRs ChiTaRs DSE-DSE DSE chr6 116599444 DSE chr6 116599435 Exonic hg19 NA AA557756 Out-of-frame Intra-chr q22.1 q22.1 115453 ChimerSeq ChiTaRs ChiTaRs PTPRK-TAOK3 PTPRK chr6 128753913 TAOK3 chr12 118727098 Exonic hg19 NA AK025196 Out-of-frame Inter-chr Tumor suppressor gene q24.23 115454 ChimerSeq ChiTaRs ChiTaRs CCNY-CUL2 CCNY chr10 35636422 CUL2 chr10 35343444 Exonic hg19 NA DB474006 Out-of-frame Intra-chr p11.21 p11.21 Tumor suppressor gene 115455 ChimerSeq ChiTaRs ChiTaRs ANK2-ANK2 ANK2 chr4 114274914 ANK2 chr4 114275023 Exonic hg19 NA AI758236 Out-of-frame Intra-chr q25 q25 115456 ChimerSeq ChiTaRs ChiTaRs KRCC1-KRCC1 KRCC1 chr2 88333775 KRCC1 chr2 88327003 Exonic hg19 NA AK025986 Out-of-frame Intra-chr p11.2 p11.2 115457 ChimerSeq ChiTaRs ChiTaRs IQSEC1-DDX3X IQSEC1 chr3 12979029 DDX3X chrX 41200519 Exonic hg19 NA CD674186 Out-of-frame Inter-chr p25.2 p11.4 Tumor suppressor gene 115458 ChimerSeq ChiTaRs ChiTaRs PKP3-PKP3 PKP3 chr11 404908 PKP3 chr11 404286 Exonic hg19 NA CA450526 3'UTR-CDS Intra-chr p15.5 p15.5 115459 ChimerSeq ChiTaRs ChiTaRs SAMD12-PPP2CA SAMD12 chr8 119274046 PPP2CA chr5 133532782 Exonic hg19 NA AK124366 Out-of-frame Inter-chr q24.12 q31.1 Tumor suppressor gene 115460 ChimerSeq ChiTaRs ChiTaRs SPATA5-SPATA5 SPATA5 chr4 124127158 SPATA5 chr4 124126321 Exonic hg19 NA DW430236 Out-of-frame Intra-chr q28.1 q28.1 115461 ChimerSeq ChiTaRs ChiTaRs MSMP-RGP1 MSMP chr9 35754541 RGP1 chr9 35752920 Exonic hg19 NA CN307746 Out-of-frame Intra-chr p13.3 p13.3 115462 ChimerSeq ChiTaRs ChiTaRs PDE6D-PDE6D PDE6D chr2 232645953 PDE6D chr2 232597697 Exonic hg19 NA AJ001626 Out-of-frame Intra-chr q37.1 q37.1 115463 ChimerSeq ChiTaRs ChiTaRs ARHGAP12-ARHGAP12 ARHGAP12 chr10 32197518 ARHGAP12 chr10 32197790 Exonic hg19 NA BF329236 Out-of-frame Intra-chr p11.22 p11.22 115464 ChimerSeq ChiTaRs ChiTaRs LHX6-SYTL4 LHX6 chr9 124977432 SYTL4 chrX 99930904 Exonic hg19 NA DB295306 Out-of-frame Inter-chr q33.2 Tumor suppressor gene Transcription factor q22.1 115465 ChimerSeq ChiTaRs ChiTaRs IGF2BP3-SSR2 IGF2BP3 chr7 23436512 SSR2 chr1 155979325 Exonic hg19 NA BF326256 Out-of-frame Inter-chr p15.3 q22 115466 ChimerSeq ChiTaRs ChiTaRs TNKS2-C3orf70 TNKS2 chr10 93619406 C3orf70 chr3 184863472 Exonic hg19 NA DW433576 Out-of-frame Inter-chr q23.32 q27.2 115467 ChimerSeq ChiTaRs ChiTaRs APOA2-PFKFB2 APOA2 chr1 161192731 PFKFB2 chr1 207219676 Exonic hg19 NA AF090896 Out-of-frame Intra-chr q23.3 q32.1 115468 ChimerSeq ChiTaRs ChiTaRs FOXP1-PPP1CB FOXP1 chr3 71630710 PPP1CB chr2 28999716 Exonic hg19 NA AL597156 5'UTR-CDS Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor p23.2 115469 ChimerSeq ChiTaRs ChiTaRs NDFIP1-NDFIP1 NDFIP1 chr5 141532340 NDFIP1 chr5 141532173 Exonic hg19 NA AI242266 Out-of-frame Intra-chr q31.3 q31.3 115470 ChimerSeq ChiTaRs ChiTaRs KLC4-LCK KLC4 chr6 43042832 LCK chr1 32718641 Exonic hg19 NA AA778926 Out-of-frame Inter-chr p21.1 p35.2 TK:Src Oncogene 115471 ChimerSeq ChiTaRs ChiTaRs MEA1-MEA1 MEA1 chr6 42980146 MEA1 chr6 42979974 Exonic hg19 NA AA627306 Out-of-frame Intra-chr p21.1 p21.1 115472 ChimerSeq ChiTaRs ChiTaRs RASSF4-RASSF4 RASSF4 chr10 45472314 RASSF4 chr10 45472567 Exonic hg19 NA BQ932506 Out-of-frame Intra-chr q11.21 Tumor suppressor gene q11.21 Tumor suppressor gene 115473 ChimerSeq ChiTaRs ChiTaRs PVT1-SMARCA2 PVT1 chr8 129024886 SMARCA2 chr9 2111914 Exonic hg19 NA BF934626 Out-of-frame Inter-chr q24.21 p24.3 Tumor suppressor gene 115474 ChimerSeq ChiTaRs ChiTaRs KCP-CKLF KCP chr7 128508788 CKLF chr16 66596067 Exonic hg19 NA BC068076 Out-of-frame Inter-chr q32.1 q21 Tumor suppressor gene 115475 ChimerSeq ChiTaRs ChiTaRs NCOA2-CAPZB NCOA2 chr8 71291001 CAPZB chr1 19672171 Exonic hg19 NA AL706656 Out-of-frame Inter-chr q13.3 Oncogene Transcription factor p36.13 115476 ChimerSeq ChiTaRs ChiTaRs SESN1-SESN1 SESN1 chr6 109308759 SESN1 chr6 109308118 Exonic hg19 NA BG165736 Out-of-frame Intra-chr q21 q21 115477 ChimerSeq ChiTaRs ChiTaRs SMYD5-RREB1 SMYD5 chr2 73449044 RREB1 chr6 7113629 Exonic hg19 NA BE938066 Out-of-frame Inter-chr p13.2 p24.3 Transcription factor 115478 ChimerSeq ChiTaRs ChiTaRs COL12A1-TAGLN COL12A1 chr6 75804861 TAGLN chr11 117075021 Exonic hg19 NA BU945056 Out-of-frame Inter-chr q14.1 q23.3 Tumor suppressor gene 115479 ChimerSeq ChiTaRs ChiTaRs SLC1A3-IFITM1 SLC1A3 chr5 36684643 IFITM1 chr11 314122 Exonic hg19 NA AW888966 Out-of-frame Inter-chr p13.2 p15.5 Oncogene 115480 ChimerSeq ChiTaRs ChiTaRs NECAP2-NECAP2 NECAP2 chr1 16785851 NECAP2 chr1 16785833 Exonic hg19 NA BQ424276 Out-of-frame Intra-chr p36.13 p36.13 115481 ChimerSeq ChiTaRs ChiTaRs TLK1-TTLL13 TLK1 chr2 172087784 TTLL13 chr15 90814884 Exonic hg19 NA BI056676 Out-of-frame Inter-chr q31.1 Other:TLK 115482 ChimerSeq ChiTaRs ChiTaRs ZKSCAN1-ZKSCAN1 ZKSCAN1 chr7 99621202 ZKSCAN1 chr7 99621448 Exonic hg19 NA BF760316 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Transcription factor 115483 ChimerSeq ChiTaRs ChiTaRs CSGALNACT1-CSGALNACT1 CSGALNACT1 chr8 19589568 CSGALNACT1 chr8 19591592 Exonic hg19 NA DW420626 Out-of-frame Intra-chr p21.3 p21.3 115484 ChimerSeq ChiTaRs ChiTaRs CALU-CALU CALU chr7 128410630 CALU chr7 128410875 Exonic hg19 NA AW196446 Out-of-frame Intra-chr q32.1 q32.1 115485 ChimerSeq ChiTaRs ChiTaRs COPG1-HOXC9 COPG1 chr3 128996226 HOXC9 chr12 54393942 Exonic hg19 NA BG395696 Out-of-frame Inter-chr q21.3 q13.13 Transcription factor 115486 ChimerSeq ChiTaRs ChiTaRs PTPRN-GNAS PTPRN chr2 220154577 GNAS chr20 57485990 Exonic hg19 NA BP388116 Out-of-frame Inter-chr q35 q13.32 Oncogene 115487 ChimerSeq ChiTaRs ChiTaRs DDB1-DDB1 DDB1 chr11 61077807 DDB1 chr11 61071362 Exonic hg19 NA BF976636 Out-of-frame Intra-chr q12.2 q12.2 115488 ChimerSeq ChiTaRs ChiTaRs CAST-CAST CAST chr5 96110384 CAST chr5 96109284 Exonic hg19 NA CV573006 Out-of-frame Intra-chr q15 q15 115489 ChimerSeq ChiTaRs ChiTaRs TOE1-TOE1 TOE1 chr1 45808766 TOE1 chr1 45808754 Exonic hg19 NA CT001896 Out-of-frame Intra-chr p34.1 p34.1 115490 ChimerSeq ChiTaRs ChiTaRs STARD3NL-STARD3NL STARD3NL chr7 38240856 STARD3NL chr7 38233212 Exonic hg19 NA BU199306 Out-of-frame Intra-chr p14.1 p14.1 115491 ChimerSeq ChiTaRs ChiTaRs OBFC1-OBFC1 OBFC1 chr10 105638345 OBFC1 chr10 105659817 Exonic hg19 NA BG427356 Out-of-frame Intra-chr 115492 ChimerSeq ChiTaRs ChiTaRs HCG25-ZBTB7C HCG25 chr6 4698710 ZBTB7C chr18 45840872 Exonic hg19 NA BF820096 Out-of-frame Inter-chr q21.1 Tumor suppressor gene Transcription factor 115493 ChimerSeq ChiTaRs ChiTaRs MYLK-MYLK MYLK chr3 123367869 MYLK chr3 123368007 Exonic hg19 NA BP376396 Out-of-frame Intra-chr q21.1 q21.1 115494 ChimerSeq ChiTaRs ChiTaRs PIWIL2-ROCK2 PIWIL2 chr8 22133991 ROCK2 chr2 11351915 Exonic hg19 NA BF061806 Out-of-frame Inter-chr p21.3 Tumor suppressor gene p25.1 AGC:DMPK 115495 ChimerSeq ChiTaRs ChiTaRs SEC63-LRRC39 SEC63 chr6 108248799 LRRC39 chr1 100626390 Exonic hg19 NA BU570466 Out-of-frame Inter-chr q21 p21.2 115496 ChimerSeq ChiTaRs ChiTaRs SNX2-ZFC3H1 SNX2 chr5 122165799 ZFC3H1 chr12 72023384 Exonic hg19 NA AI738516 Out-of-frame Inter-chr q23.2 q21.1 115497 ChimerSeq ChiTaRs ChiTaRs VCP-PIGR VCP chr9 35056447 PIGR chr1 207110463 Exonic hg19 NA BQ320186 Out-of-frame Inter-chr p13.3 q32.1 115498 ChimerSeq ChiTaRs ChiTaRs NKX6-3-NKX6-3 NKX6-3 chr8 41542152 NKX6-3 chr8 41542160 Exonic hg19 NA BI030456 Out-of-frame Intra-chr p11.21 p11.21 115499 ChimerSeq ChiTaRs ChiTaRs MXD1-SORL1 MXD1 chr2 70151676 SORL1 chr11 121359675 Exonic hg19 NA AW866776 Out-of-frame Inter-chr p13.3 Transcription factor q24.1 115500 ChimerSeq ChiTaRs ChiTaRs EFR3A-EFR3A EFR3A chr8 133004241 EFR3A chr8 133004249 Exonic hg19 NA BE005906 Out-of-frame Intra-chr q24.22 q24.22 115501 ChimerSeq ChiTaRs ChiTaRs IGFBP5-RPL35 IGFBP5 chr2 217537116 RPL35 chr9 127622461 Exonic hg19 NA AI682966 3'UTR-CDS Inter-chr q35 Tumor suppressor gene q33.3 115502 ChimerSeq ChiTaRs ChiTaRs DPYSL2-C22orf46 DPYSL2 chr8 26514385 C22orf46 chr22 42091795 Exonic hg19 NA BE699656 Out-of-frame Inter-chr p21.2 q13.2 115503 ChimerSeq ChiTaRs ChiTaRs THRAP3-MALAT1 THRAP3 chr1 36754948 MALAT1 chr11 65267889 Exonic hg19 NA BE835426 Out-of-frame Inter-chr p34.3 q13.1 115504 ChimerSeq ChiTaRs ChiTaRs ASRGL1-ASRGL1 ASRGL1 chr11 62160040 ASRGL1 chr11 62160178 Exonic hg19 NA DB298136 Out-of-frame Intra-chr q12.3 q12.3 115505 ChimerSeq ChiTaRs ChiTaRs CTSS-STYX CTSS chr1 150705276 STYX chr14 53240849 Exonic hg19 NA CA748546 Out-of-frame Inter-chr q21.3 q22.1 115506 ChimerSeq ChiTaRs ChiTaRs LDLRAD2-MGAT4C LDLRAD2 chr1 22148924 MGAT4C chr12 86588704 Exonic hg19 NA BI002606 Out-of-frame Inter-chr p36.12 115507 ChimerSeq ChiTaRs ChiTaRs CACNA2D1-CACNA2D1 CACNA2D1 chr7 81898337 CACNA2D1 chr7 81897940 Exonic hg19 NA BF750086 Out-of-frame Intra-chr q21.11 q21.11 115508 ChimerSeq ChiTaRs ChiTaRs CACNB2-NUP98 CACNB2 chr10 18828431 NUP98 chr11 3793058 Exonic hg19 NA BF922976 Out-of-frame Inter-chr p12.33 p15.4 Oncogene Tumor suppressor gene 115509 ChimerSeq ChiTaRs ChiTaRs NUP188-PCNP NUP188 chr9 131768976 PCNP chr3 101295262 Exonic hg19 NA BC071936 Out-of-frame Inter-chr q34.11 q12.3 115510 ChimerSeq ChiTaRs ChiTaRs RAB11FIP1-RAB11FIP1 RAB11FIP1 chr8 37716728 RAB11FIP1 chr8 37716722 Exonic hg19 NA BU680326 Out-of-frame Intra-chr p11.23 p11.23 115511 ChimerSeq ChiTaRs ChiTaRs SNHG3-PPP1R3B SNHG3 chr1 28835849 PPP1R3B chr8 8996368 Exonic hg19 NA BM474506 Out-of-frame Inter-chr p35.3 p23.1 115512 ChimerSeq ChiTaRs ChiTaRs TMCO1-TMCO1 TMCO1 chr1 165697033 TMCO1 chr1 165697149 Exonic hg19 NA CA312776 Out-of-frame Intra-chr q24.1 q24.1 115513 ChimerSeq ChiTaRs ChiTaRs CDK9-CDK9 CDK9 chr9 130552069 CDK9 chr9 130552084 Exonic hg19 NA BI024596 Out-of-frame Intra-chr q34.11 CMGC:CDK q34.11 CMGC:CDK 115514 ChimerSeq ChiTaRs ChiTaRs NBAS-PRRC2C NBAS chr2 15319158 PRRC2C chr1 171549021 Exonic hg19 NA BG015456 Out-of-frame Inter-chr p24.3 q24.3 115515 ChimerSeq ChiTaRs ChiTaRs RBMX-MAP2K3 RBMX chrX 135961427 MAP2K3 chr17 21187958 Exonic hg19 NA DA620086 Out-of-frame Inter-chr q26.3 Tumor suppressor gene p11.2 STE:STE7 115516 ChimerSeq ChiTaRs ChiTaRs PHYHIPL-CCND1 PHYHIPL chr10 60936739 CCND1 chr11 69467946 Exonic hg19 NA BE930736 Out-of-frame Inter-chr q21.1 q13.3 Oncogene 115517 ChimerSeq ChiTaRs ChiTaRs MAGED2-HNRPDL MAGED2 chrX 54839986 HNRPDL chr4 83347229 Exonic hg19 NA BF376806 Out-of-frame Inter-chr p11.21 115518 ChimerSeq ChiTaRs ChiTaRs TUBB4B-PGAP2 TUBB4B chr9 140138159 PGAP2 chr11 3847053 Exonic hg19 NA BQ319576 3'UTR-3'UTR Inter-chr q34.3 p15.4 115519 ChimerSeq ChiTaRs ChiTaRs USP54-USP54 USP54 chr10 75297720 USP54 chr10 75302507 Exonic hg19 NA AW836906 Out-of-frame Intra-chr q22.2 q22.2 115520 ChimerSeq ChiTaRs ChiTaRs PDZD8-CHRNB1 PDZD8 chr10 119043669 CHRNB1 chr17 7350764 Exonic hg19 NA AW062966 Out-of-frame Inter-chr q26.11 115521 ChimerSeq ChiTaRs ChiTaRs PDGFRB-KPNA6 PDGFRB chr5 149494107 KPNA6 chr1 32628069 Exonic hg19 NA BI050756 Out-of-frame Inter-chr q32 Oncogene p35.2 115522 ChimerSeq ChiTaRs ChiTaRs DVL3-PKP4 DVL3 chr3 183887905 PKP4 chr2 159389774 Exonic hg19 NA AW842036 Out-of-frame Inter-chr q27.1 q24.1 115523 ChimerSeq ChiTaRs ChiTaRs DCAF16-GORAB DCAF16 chr4 17802442 GORAB chr1 170522255 Exonic hg19 NA AW131866 Out-of-frame Inter-chr p15.31 q24.2 Tumor suppressor gene 115524 ChimerSeq ChiTaRs ChiTaRs BAMBI-BAMBI BAMBI chr10 28968464 BAMBI chr10 28967681 Exonic hg19 NA BX113436 Out-of-frame Intra-chr p12.1 p12.1 115525 ChimerSeq ChiTaRs ChiTaRs ARID1B-PLCG1 ARID1B chr6 157111227 PLCG1 chr20 39799245 Exonic hg19 NA BF770556 Out-of-frame Inter-chr q25.3 Oncogene q12 Oncogene 115526 ChimerSeq ChiTaRs ChiTaRs ATXN1-ATXN1 ATXN1 chr6 16671148 ATXN1 chr6 16690971 Exonic hg19 NA AU119016 Out-of-frame Intra-chr p22.3 p22.3 115527 ChimerSeq ChiTaRs ChiTaRs BMP6-BMP6 BMP6 chr6 7775894 BMP6 chr6 7776028 Exonic hg19 NA BF368716 Out-of-frame Intra-chr p24.3 p24.3 115528 ChimerSeq ChiTaRs ChiTaRs FARS2-FARS2 FARS2 chr6 5628031 FARS2 chr6 5632278 Exonic hg19 NA AW850186 Out-of-frame Intra-chr p25.1 p25.1 115529 ChimerSeq ChiTaRs ChiTaRs RBM3-RBM3 RBM3 chrX 48438805 RBM3 chrX 48436436 Exonic hg19 NA H20596 Out-of-frame Intra-chr p11.23 p11.23 115530 ChimerSeq ChiTaRs ChiTaRs RPL32-PPP2R1A RPL32 chr3 12877645 PPP2R1A chr19 52716331 Exonic hg19 NA W48816 Out-of-frame Inter-chr p25.2 q13.41 Oncogene 115531 ChimerSeq ChiTaRs ChiTaRs CBR4-COL11A1 CBR4 chr4 169917061 COL11A1 chr1 103488351 Exonic hg19 NA AW175786 Out-of-frame Inter-chr q32.3 p21.1 115532 ChimerSeq ChiTaRs ChiTaRs EGFLAM-EGFLAM EGFLAM chr5 38464816 EGFLAM chr5 38464790 Exonic hg19 NA AL048116 Out-of-frame Intra-chr p13.2 p13.2 115533 ChimerSeq ChiTaRs ChiTaRs TOMM40L-ARPC1A TOMM40L chr1 161196568 ARPC1A chr7 98963510 Exonic hg19 NA BE720796 Out-of-frame Inter-chr q23.3 q22.1 115534 ChimerSeq ChiTaRs ChiTaRs RPL23AP53-SDCCAG8 RPL23AP53 chr8 169879 SDCCAG8 chr1 243529496 Exonic hg19 NA BF762716 Out-of-frame Inter-chr p23.3 115535 ChimerSeq ChiTaRs ChiTaRs ALPL-CBLB ALPL chr1 21844324 CBLB chr3 105421229 Exonic hg19 NA BF851316 Out-of-frame Inter-chr p36.12 Tumor suppressor gene q13.11 115536 ChimerSeq ChiTaRs ChiTaRs CCT3-CCT3 CCT3 chr1 156303425 CCT3 chr1 156290660 Exonic hg19 NA BE783136 Out-of-frame Intra-chr q22 q22 115537 ChimerSeq ChiTaRs ChiTaRs PHF1-KIAA0247 PHF1 chr6 4862026 KIAA0247 chr14 70102750 Exonic hg19 NA BF359136 Out-of-frame Inter-chr Transcription factor 115538 ChimerSeq ChiTaRs ChiTaRs MYLIP-MYLIP MYLIP chr6 16148333 MYLIP chr6 16148273 Exonic hg19 NA AA847526 Out-of-frame Intra-chr p22.3 p22.3 115539 ChimerSeq ChiTaRs ChiTaRs RPL14-RPL14 RPL14 chr3 40503501 RPL14 chr3 40503485 Exonic hg19 NA BU608656 Out-of-frame Intra-chr p22.1 p22.1 115540 ChimerSeq ChiTaRs ChiTaRs WDR70-DDX17 WDR70 chr5 37434427 DDX17 chr22 38885837 Exonic hg19 NA BI034946 Out-of-frame Inter-chr p13.2 q13.1 115541 ChimerSeq ChiTaRs ChiTaRs ERBB4-KCNAB1 ERBB4 chr2 213122236 KCNAB1 chr3 156192450 Exonic hg19 NA BF108506 Out-of-frame Inter-chr q34 Oncogene Tumor suppressor gene q25.31 115542 ChimerSeq ChiTaRs ChiTaRs ARHGAP26-ARHGAP26 ARHGAP26 chr5 142196551 ARHGAP26 chr5 142195600 Exonic hg19 NA EL584886 Out-of-frame Intra-chr q31.3 q31.3 115543 ChimerSeq ChiTaRs ChiTaRs FRYL-RPL11 FRYL chr4 48531069 RPL11 chr1 24019132 Exonic hg19 NA AU100496 Out-of-frame Inter-chr p11 p36.11 Tumor suppressor gene 115544 ChimerSeq ChiTaRs ChiTaRs MICB-RAB7L1 MICB chr6 2634728 RAB7L1 chr1 205738324 Exonic hg19 NA AW299686 Out-of-frame Inter-chr 115545 ChimerSeq ChiTaRs ChiTaRs CDKAL1-PPP2R5C CDKAL1 chr6 21003468 PPP2R5C chr14 102391037 Exonic hg19 NA BQ717736 Out-of-frame Inter-chr p22.3 q32.31 Tumor suppressor gene 115546 ChimerSeq ChiTaRs ChiTaRs FAM53B-FAM53B FAM53B chr10 126394512 FAM53B chr10 126394539 Exonic hg19 NA CV419906 Out-of-frame Intra-chr q26.13 q26.13 115547 ChimerSeq ChiTaRs ChiTaRs ROBO2-PSMD14 ROBO2 chr3 77695522 PSMD14 chr2 162183877 Exonic hg19 NA BQ337746 Out-of-frame Inter-chr p12.3 q24.2 115548 ChimerSeq ChiTaRs ChiTaRs MDH1-MDH1 MDH1 chr2 63833146 MDH1 chr2 63831899 Exonic hg19 NA BG290076 Out-of-frame Intra-chr p15 p15 115549 ChimerSeq ChiTaRs ChiTaRs EFHD2-SP3 EFHD2 chr1 15756826 SP3 chr2 174777966 Exonic hg19 NA AA582766 Out-of-frame Inter-chr p36.21 q31.1 Transcription factor 115550 ChimerSeq ChiTaRs ChiTaRs HDLBP-ARID5B HDLBP chr2 242227333 ARID5B chr10 63814854 Exonic hg19 NA BF930016 Out-of-frame Inter-chr q37.3 q21.2 Transcription factor 115551 ChimerSeq ChiTaRs ChiTaRs MIR548N-MIR548N MIR548N chr2 179417186 MIR548N chr2 179453312 Exonic hg19 NA F00536 Out-of-frame Intra-chr p14.2 p14.2 115552 ChimerSeq ChiTaRs ChiTaRs MOSPD3-CCDC86 MOSPD3 chr7 100212998 CCDC86 chr11 60609989 Exonic hg19 NA AA777656 Out-of-frame Inter-chr q22.1 q12.2 115553 ChimerSeq ChiTaRs ChiTaRs HNRNPH3-HNRNPH3 HNRNPH3 chr10 70102306 HNRNPH3 chr10 70102229 Exonic hg19 NA AA489606 Out-of-frame Intra-chr q21.3 q21.3 115554 ChimerSeq ChiTaRs ChiTaRs DMD-DMD DMD chrX 32364186 DMD chrX 32509508 Exonic hg19 NA AW377486 Out-of-frame Intra-chr p21.1 Tumor suppressor gene p21.1 Tumor suppressor gene 115555 ChimerSeq ChiTaRs ChiTaRs PTPRN2-ANKRD13A PTPRN2 chr7 157846864 ANKRD13A chr12 110471997 Exonic hg19 NA BF813226 Out-of-frame Inter-chr q36.3 q24.11 115556 ChimerSeq ChiTaRs ChiTaRs SREK1-ANKRD12 SREK1 chr5 65470869 ANKRD12 chr18 9255476 Exonic hg19 NA BQ325146 Out-of-frame Inter-chr q12.3 p11.22 115557 ChimerSeq ChiTaRs ChiTaRs GDA-GDA GDA chr9 74867140 GDA chr9 74860152 Exonic hg19 NA BM968596 3'UTR-CDS Intra-chr q21.13 q21.13 115558 ChimerSeq ChiTaRs ChiTaRs SRRM1-CFDP1 SRRM1 chr1 24999772 CFDP1 chr16 75462026 Exonic hg19 NA BG178896 3'UTR-CDS Inter-chr p36.11 q23.1 115559 ChimerSeq ChiTaRs ChiTaRs EIF4G2-DDX17 EIF4G2 chr11 10823232 DDX17 chr22 38879650 Exonic hg19 NA BP431076 Out-of-frame Inter-chr p15.4 q13.1 115560 ChimerSeq ChiTaRs ChiTaRs COL1A2-COL1A2 COL1A2 chr7 94058639 COL1A2 chr7 94051227 Exonic hg19 NA AU120016 Out-of-frame Intra-chr q21.3 q21.3 115561 ChimerSeq ChiTaRs ChiTaRs ZNF697-ZNF697 ZNF697 chr1 120162442 ZNF697 chr1 120162050 Exonic hg19 NA BE891316 Out-of-frame Intra-chr p12 Transcription factor p12 Transcription factor 115562 ChimerSeq ChiTaRs ChiTaRs LMAN2L-LMAN2L LMAN2L chr2 97378543 LMAN2L chr2 97378615 Exonic hg19 NA AW176246 Out-of-frame Intra-chr q11.2 q11.2 115563 ChimerSeq ChiTaRs ChiTaRs ST3GAL5-KCMF1 ST3GAL5 chr2 86116131 KCMF1 chr2 85255010 Exonic hg19 NA BI462676 Out-of-frame Intra-chr p11.2 p11.2 Transcription factor 115564 ChimerSeq ChiTaRs ChiTaRs GIMAP1-GIMAP5-PHACTR3 GIMAP1-GIMAP5 chr7 150440353 PHACTR3 chr20 58411510 Exonic hg19 NA BE764386 Out-of-frame Inter-chr q36.1 q13.32 115565 ChimerSeq ChiTaRs ChiTaRs PHF21A-PHF21A PHF21A chr11 45951721 PHF21A chr11 45952961 Exonic hg19 NA AA442046 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Transcription factor 115566 ChimerSeq ChiTaRs ChiTaRs CD59-CD59 CD59 chr11 33743971 CD59 chr11 33731187 Exonic hg19 NA AW993226 Out-of-frame Intra-chr p13 p13 115567 ChimerSeq ChiTaRs ChiTaRs OSBPL10-MRPL51 OSBPL10 chr3 31725260 MRPL51 chr12 6602027 Exonic hg19 NA AA906776 In-Frame Inter-chr p22.3 p13.31 115568 ChimerSeq ChiTaRs ChiTaRs AHR-AHR AHR chr7 17385774 AHR chr7 17385163 Exonic hg19 NA BU686796 Out-of-frame Intra-chr p21.1 Tumor suppressor gene Transcription factor p21.1 Tumor suppressor gene Transcription factor 115569 ChimerSeq ChiTaRs ChiTaRs TBX18-RCAN2 TBX18 chr6 85472205 RCAN2 chr6 46216467 Exonic hg19 NA DB270826 Out-of-frame Intra-chr q14.3 Transcription factor p12.3 115570 ChimerSeq ChiTaRs ChiTaRs TNKS1BP1-LRCH4 TNKS1BP1 chr11 57075591 LRCH4 chr7 100172283 Exonic hg19 NA AV704306 Out-of-frame Inter-chr q12.1 q22.1 115571 ChimerSeq ChiTaRs ChiTaRs WDR78-WDR78 WDR78 chr1 67278657 WDR78 chr1 67278631 Exonic hg19 NA CB242186 Out-of-frame Intra-chr p31.3 p31.3 115572 ChimerSeq ChiTaRs ChiTaRs LYN-LYN LYN chr8 56923146 LYN chr8 56922792 Exonic hg19 NA BU674256 Out-of-frame Intra-chr q12.1 TK:Src q12.1 TK:Src 115573 ChimerSeq ChiTaRs ChiTaRs GRINA-DGKG GRINA chr8 145065536 DGKG chr3 185910768 Exonic hg19 NA BF732626 Out-of-frame Inter-chr q24.3 q27.3 115574 ChimerSeq ChiTaRs ChiTaRs FAM69B-FAM69B FAM69B chr9 139617916 FAM69B chr9 139617931 Exonic hg19 NA AA305656 Out-of-frame Intra-chr q34.3 q34.3 115575 ChimerSeq ChiTaRs ChiTaRs CAPN10-CAPN10 CAPN10 chr2 241538517 CAPN10 chr2 241535799 Exonic hg19 NA CX870856 Out-of-frame Intra-chr q37.3 q37.3 115576 ChimerSeq ChiTaRs ChiTaRs CD74-SMAD3 CD74 chr5 149781276 SMAD3 chr15 67487255 Exonic hg19 NA BI003846 Out-of-frame Inter-chr q33.1 q22.33 Transcription factor 115577 ChimerSeq ChiTaRs ChiTaRs ITM2C-OPA3 ITM2C chr2 231743962 OPA3 chr19 46086336 Exonic hg19 NA AA523886 Out-of-frame Inter-chr q37.1 q13.32 115578 ChimerSeq ChiTaRs ChiTaRs PTPN14-PTPN14 PTPN14 chr1 214540681 PTPN14 chr1 214540357 Exonic hg19 NA BF379386 Out-of-frame Intra-chr q41 q41 115579 ChimerSeq ChiTaRs ChiTaRs KCMF1-KCMF1 KCMF1 chr2 85280807 KCMF1 chr2 85273353 Exonic hg19 NA AW803556 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Transcription factor 115580 ChimerSeq ChiTaRs ChiTaRs TNPO3-FN1 TNPO3 chr7 128658520 FN1 chr2 216241308 Exonic hg19 NA BF773006 Out-of-frame Inter-chr q32.1 q35 Oncogene 115581 ChimerSeq ChiTaRs ChiTaRs RASSF5-RASSF5 RASSF5 chr1 206760374 RASSF5 chr1 206760385 Exonic hg19 NA BE159686 Out-of-frame Intra-chr q32.1 Tumor suppressor gene q32.1 Tumor suppressor gene 115582 ChimerSeq ChiTaRs ChiTaRs CCDC80-CCDC80 CCDC80 chr3 112359938 CCDC80 chr3 112359336 Exonic hg19 NA BU634396 Out-of-frame Intra-chr q13.2 q13.2 115583 ChimerSeq ChiTaRs ChiTaRs SRSF11-SRSF11 SRSF11 chr1 70710498 SRSF11 chr1 70700409 Exonic hg19 NA BU689906 Out-of-frame Intra-chr p31.1 p31.1 115584 ChimerSeq ChiTaRs ChiTaRs PDZD2-PDZD2 PDZD2 chr5 31994699 PDZD2 chr5 31993735 Exonic hg19 NA AW885636 Out-of-frame Intra-chr p13.3 p13.3 115585 ChimerSeq ChiTaRs ChiTaRs ABCC5-TSPAN14 ABCC5 chr3 183638453 TSPAN14 chr10 82278551 Exonic hg19 NA AW062626 Out-of-frame Inter-chr q27.1 q23.1 115586 ChimerSeq ChiTaRs ChiTaRs SLC25A44-RIPK2 SLC25A44 chr1 156182587 RIPK2 chr8 90803215 Exonic hg19 NA BM929466 3'UTR-3'UTR Inter-chr q22 q21.3 TKL:RIPK 115587 ChimerSeq ChiTaRs ChiTaRs POLR2J-DLGAP4 POLR2J chr7 102113978 DLGAP4 chr20 35125134 Exonic hg19 NA AI202736 Out-of-frame Inter-chr q22.1 q11.23 115588 ChimerSeq ChiTaRs ChiTaRs APOA1BP-ARMC1 APOA1BP chr1 156563964 ARMC1 chr8 66514707 Exonic hg19 NA AV725326 Out-of-frame Inter-chr q13.1 115589 ChimerSeq ChiTaRs ChiTaRs FSHR-TRABD FSHR chr2 49216916 TRABD chr22 50629936 Exonic hg19 NA CA313756 Out-of-frame Inter-chr p16.3 q13.33 115590 ChimerSeq ChiTaRs ChiTaRs ADD3-MYT1L ADD3 chr10 111881562 MYT1L chr2 2158978 Exonic hg19 NA BF960116 Out-of-frame Inter-chr q25.1 p25.3 Transcription factor 115591 ChimerSeq ChiTaRs ChiTaRs RPAP2-TBXAS1 RPAP2 chr1 92813854 TBXAS1 chr7 139548448 Exonic hg19 NA BF893936 Out-of-frame Inter-chr p22.1 q34 115592 ChimerSeq ChiTaRs ChiTaRs LRRC8A-PDIA4 LRRC8A chr9 131655570 PDIA4 chr7 148702439 Exonic hg19 NA BF807186 Out-of-frame Inter-chr q34.11 q36.1 115593 ChimerSeq ChiTaRs ChiTaRs ATP6V0E1-ATP6V0E1 ATP6V0E1 chr5 172461556 ATP6V0E1 chr5 172461552 Exonic hg19 NA W92666 Out-of-frame Intra-chr q35.1 q35.1 115594 ChimerSeq ChiTaRs ChiTaRs VEGFA-VEGFA VEGFA chr6 43753443 VEGFA chr6 43753432 Exonic hg19 NA BF340246 Out-of-frame Intra-chr p21.1 Tumor suppressor gene p21.1 Tumor suppressor gene 115595 ChimerSeq ChiTaRs ChiTaRs ISL1-PFKFB3 ISL1 chr5 50689409 PFKFB3 chr10 6253071 Exonic hg19 NA BI047516 Out-of-frame Inter-chr q11.1 Transcription factor p15.1 115596 ChimerSeq ChiTaRs ChiTaRs CHN1-NCOR2 CHN1 chr2 175673586 NCOR2 chr12 124956726 Exonic hg19 NA BF924756 Out-of-frame Inter-chr q31.1 q24.31 115597 ChimerSeq ChiTaRs ChiTaRs SH3PXD2A-SH3PXD2A SH3PXD2A chr10 105481582 SH3PXD2A chr10 105477220 Exonic hg19 NA BE142046 Out-of-frame Intra-chr q24.33 q24.33 115598 ChimerSeq ChiTaRs ChiTaRs ZNF789-ZBTB16 ZNF789 chr7 99080578 ZBTB16 chr11 113937755 Exonic hg19 NA BG740456 Out-of-frame Inter-chr q22.1 Transcription factor q23.2 Tumor suppressor gene Transcription factor 115599 ChimerSeq ChiTaRs ChiTaRs SPIDR-SPIDR SPIDR chr8 48649556 SPIDR chr8 48649569 Exonic hg19 NA CA310756 Out-of-frame Intra-chr q11.21 q11.21 115600 ChimerSeq ChiTaRs ChiTaRs ENTPD4-ENTPD4 ENTPD4 chr8 23299236 ENTPD4 chr8 23299526 Exonic hg19 NA BF872346 In-Frame Intra-chr p21.3 p21.3 115601 ChimerSeq ChiTaRs ChiTaRs RCAN2-FAF1 RCAN2 chr6 46315081 FAF1 chr1 50922961 Exonic hg19 NA CV391946 Out-of-frame Inter-chr p12.3 p32.3 115602 ChimerSeq ChiTaRs ChiTaRs MGEA5-MGEA5 MGEA5 chr10 103573328 MGEA5 chr10 103565870 Exonic hg19 NA BE840906 Out-of-frame Intra-chr q24.32 q24.32 115603 ChimerSeq ChiTaRs ChiTaRs TSC22D2-TSC22D2 TSC22D2 chr3 150176970 TSC22D2 chr3 150176211 Exonic hg19 NA BP250566 Out-of-frame Intra-chr q25.1 q25.1 115604 ChimerSeq ChiTaRs ChiTaRs FAM160B1-FAM160B1 FAM160B1 chr10 116613792 FAM160B1 chr10 116614455 Exonic hg19 NA BE090036 Out-of-frame Intra-chr q25.3 q25.3 115605 ChimerSeq ChiTaRs ChiTaRs UNC50-GRSF1 UNC50 chr2 99234978 GRSF1 chr4 71703966 Exonic hg19 NA BM998716 Out-of-frame Inter-chr q11.2 q13.3 115606 ChimerSeq ChiTaRs ChiTaRs STIM2-PPIG STIM2 chr4 26932294 PPIG chr2 170492692 Exonic hg19 NA BF930056 Out-of-frame Inter-chr p15.2 q31.1 115607 ChimerSeq ChiTaRs ChiTaRs PDLIM5-TARDBP PDLIM5 chr4 95376414 TARDBP chr1 11083670 Exonic hg19 NA DA887356 Out-of-frame Inter-chr q22.3 p36.22 115608 ChimerSeq ChiTaRs ChiTaRs EIF3B-EIF3B EIF3B chr7 2402355 EIF3B chr7 2402339 Exonic hg19 NA CN267276 Out-of-frame Intra-chr p22.3 p22.3 115609 ChimerSeq ChiTaRs ChiTaRs SORT1-SCAP SORT1 chr1 109870726 SCAP chr3 47466690 Exonic hg19 NA AW869316 Out-of-frame Inter-chr p13.3 p21.31 115610 ChimerSeq ChiTaRs ChiTaRs ANO3-ANO3 ANO3 chr11 26581758 ANO3 chr11 26586871 Exonic hg19 NA DA828576 Out-of-frame Intra-chr p14.2 p14.2 115611 ChimerSeq ChiTaRs ChiTaRs ARPC1B-ARPC1A ARPC1B chr7 98987606 ARPC1A chr7 98972330 Exonic hg19 NA BM049376 Out-of-frame Intra-chr q22.1 q22.1 115612 ChimerSeq ChiTaRs ChiTaRs TAGLN2-LPP TAGLN2 chr1 159889168 LPP chr3 187943281 Exonic hg19 NA BE073626 Out-of-frame Inter-chr q23.2 q27.3 Oncogene 115613 ChimerSeq ChiTaRs ChiTaRs BCAP31-BCAP31 BCAP31 chrX 152989823 BCAP31 chrX 152969451 Exonic hg19 NA BE077216 Out-of-frame Intra-chr q28 q28 115614 ChimerSeq ChiTaRs ChiTaRs PLEC-PLEC PLEC chr8 144991682 PLEC chr8 144991815 Exonic hg19 NA CF121826 Out-of-frame Intra-chr q24.3 q24.3 115615 ChimerSeq ChiTaRs ChiTaRs LRRFIP1-CALCOCO2 LRRFIP1 chr2 238603939 CALCOCO2 chr17 46908389 Exonic hg19 NA DB151056 Out-of-frame Inter-chr q37.3 q21.32 115616 ChimerSeq ChiTaRs ChiTaRs NKX3-1-SNRPD1 NKX3-1 chr8 23536680 SNRPD1 chr18 19209074 Exonic hg19 NA BI855676 Out-of-frame Inter-chr p21.2 Tumor suppressor gene q11.2 115617 ChimerSeq ChiTaRs ChiTaRs SPARC-PCNX SPARC chr5 151042615 PCNX chr14 71524998 Exonic hg19 NA BE765166 Out-of-frame Inter-chr q33.1 Tumor suppressor gene 115618 ChimerSeq ChiTaRs ChiTaRs POMC-RPL14 POMC chr2 25391431 RPL14 chr3 40503530 Exonic hg19 NA CD251046 Out-of-frame Inter-chr p23.3 p22.1 115619 ChimerSeq ChiTaRs ChiTaRs RPS6KA2-PYGB RPS6KA2 chr6 166945450 PYGB chr20 25277317 Exonic hg19 NA Z18966 Out-of-frame Inter-chr q27 Oncogene Tumor suppressor gene p11.21 115620 ChimerSeq ChiTaRs ChiTaRs NBPF9-NBPF11 NBPF9 chr1 144994860 NBPF11 chr1 147917467 Exonic hg19 NA AB042556 Out-of-frame Intra-chr q21.2 q21.2 115621 ChimerSeq ChiTaRs ChiTaRs ZNF804A-MICU3 ZNF804A chr2 185676287 MICU3 chr8 16953200 Exonic hg19 NA DA397336 Out-of-frame Inter-chr q32.1 Transcription factor p22 115622 ChimerSeq ChiTaRs ChiTaRs TLR8-AS1-AASS TLR8-AS1 chrX 12939444 AASS chr7 121715774 Exonic hg19 NA H65666 Out-of-frame Inter-chr p22.2 q31.32 Tumor suppressor gene 115623 ChimerSeq ChiTaRs ChiTaRs PCDHGA1-PCDHGA1 PCDHGA1 chr5 140870412 PCDHGA1 chr5 140869903 Exonic hg19 NA AI214146 Out-of-frame Intra-chr q31.3 q31.3 115624 ChimerSeq ChiTaRs ChiTaRs DCTN4-PSMB7 DCTN4 chr5 150112409 PSMB7 chr9 127120646 Exonic hg19 NA BF831316 Out-of-frame Inter-chr q33.1 q33.3 115625 ChimerSeq ChiTaRs ChiTaRs RPL10-SCLY RPL10 chrX 153629254 SCLY chr2 239007418 Exonic hg19 NA AA813916 Out-of-frame Inter-chr q28 Tumor suppressor gene q37.3 115626 ChimerSeq ChiTaRs ChiTaRs GNPAT-GNPAT GNPAT chr1 231393390 GNPAT chr1 231392635 Exonic hg19 NA AW810786 Out-of-frame Intra-chr q42.2 q42.2 115627 ChimerSeq ChiTaRs ChiTaRs EVI5-TMEM87A EVI5 chr1 93175666 TMEM87A chr15 42503337 Exonic hg19 NA BM475516 Out-of-frame Inter-chr p22.1 q15.1 115628 ChimerSeq ChiTaRs ChiTaRs DES-DES DES chr2 220285626 DES chr2 220286197 Exonic hg19 NA CV336076 Out-of-frame Intra-chr q35 q35 115629 ChimerSeq ChiTaRs ChiTaRs TRAF3IP2-AS1-TRAF3IP2-AS1 TRAF3IP2-AS1 chr6 111880270 TRAF3IP2-AS1 chr6 111880312 Exonic hg19 NA BU679926 Out-of-frame Intra-chr q21 q21 Tumor suppressor gene 115630 ChimerSeq ChiTaRs ChiTaRs PGRMC1-PGRMC1 PGRMC1 chrX 118378199 PGRMC1 chrX 118378319 Exonic hg19 NA AW946376 Out-of-frame Intra-chr q24 q24 115631 ChimerSeq ChiTaRs ChiTaRs CLCN5-CLCN5 CLCN5 chrX 49843745 CLCN5 chrX 49860100 Exonic hg19 NA EB386816 Out-of-frame Intra-chr p11.23 p11.23 115632 ChimerSeq ChiTaRs ChiTaRs STAG1-STAG1 STAG1 chr3 136061745 STAG1 chr3 136061506 Exonic hg19 NA AA526196 Out-of-frame Intra-chr q22.3 q22.3 115633 ChimerSeq ChiTaRs ChiTaRs PHACTR1-PHACTR1 PHACTR1 chr6 13287893 PHACTR1 chr6 13053649 Exonic hg19 NA DA794726 Out-of-frame Intra-chr 115634 ChimerSeq ChiTaRs ChiTaRs CNKSR3-CNKSR3 CNKSR3 chr6 154718677 CNKSR3 chr6 154718996 Exonic hg19 NA AA406296 Out-of-frame Intra-chr q25.2 q25.2 115635 ChimerSeq ChiTaRs ChiTaRs RPS20-CFD RPS20 chr8 56987429 CFD chr19 861721 Exonic hg19 NA BP428696 Out-of-frame Inter-chr q12.1 p13.3 115636 ChimerSeq ChiTaRs ChiTaRs EIF3H-ACSL5 EIF3H chr8 117658757 ACSL5 chr10 114177613 Exonic hg19 NA AI302586 Out-of-frame Inter-chr q24.11 q25.2 115637 ChimerSeq ChiTaRs ChiTaRs STK39-NFIC STK39 chr2 169078843 NFIC chr19 3464961 Exonic hg19 NA AA876316 Out-of-frame Inter-chr q24.3 p13.3 Transcription factor 115638 ChimerSeq ChiTaRs ChiTaRs QSER1-QSER1 QSER1 chr11 32956981 QSER1 chr11 32948701 Exonic hg19 NA AA053856 Out-of-frame Intra-chr p13 p13 115639 ChimerSeq ChiTaRs ChiTaRs TRIM2-SGSM3 TRIM2 chr4 154197383 SGSM3 chr22 40800105 Exonic hg19 NA BF934766 Out-of-frame Inter-chr q31.3 q13.1 115640 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-SQSTM1 INS-IGF2 chr11 2150536 SQSTM1 chr5 179263539 Exonic hg19 NA BU076816 Out-of-frame Inter-chr p15.5 q35.3 Oncogene 115641 ChimerSeq ChiTaRs ChiTaRs GNB2L1-RCL1 GNB2L1 chr5 180664003 RCL1 chr9 4847614 Exonic hg19 NA AI613276 Out-of-frame Inter-chr Tumor suppressor gene p24.1 115642 ChimerSeq ChiTaRs ChiTaRs IPO11-SAP30BP IPO11 chr5 61819528 SAP30BP chr17 73663450 Exonic hg19 NA CB155026 Out-of-frame Inter-chr q12.1 q25.1 115643 ChimerSeq ChiTaRs ChiTaRs ADAM12-RTN4 ADAM12 chr10 127704285 RTN4 chr2 55199406 Exonic hg19 NA BG009006 Out-of-frame Inter-chr q26.2 p16.1 Tumor suppressor gene 115644 ChimerSeq ChiTaRs ChiTaRs DSE-DSE DSE chr6 116599359 DSE chr6 116599103 Exonic hg19 NA BF959216 Out-of-frame Intra-chr q22.1 q22.1 115645 ChimerSeq ChiTaRs ChiTaRs ASH2L-MEMO1 ASH2L chr8 37964643 MEMO1 chr2 32264376 Exonic hg19 NA BI335876 Out-of-frame Inter-chr p11.23 p22.3 115646 ChimerSeq ChiTaRs ChiTaRs HIST1H3B-ZNF385D HIST1H3B chr6 26032325 ZNF385D chr3 22269726 Exonic hg19 NA DB156306 Out-of-frame Inter-chr p22.2 Oncogene p24.3 Transcription factor 115647 ChimerSeq ChiTaRs ChiTaRs ACOT7-ACOT7 ACOT7 chr1 6324403 ACOT7 chr1 6324332 Exonic hg19 NA U91316 Out-of-frame Intra-chr p36.31 p36.31 115648 ChimerSeq ChiTaRs ChiTaRs RUFY2-RUFY2 RUFY2 chr10 70103421 RUFY2 chr10 70103342 Exonic hg19 NA AA828786 Out-of-frame Intra-chr q21.3 q21.3 115649 ChimerSeq ChiTaRs ChiTaRs USP40-PPIH USP40 chr2 234431898 PPIH chr1 43133055 Exonic hg19 NA BE707176 Out-of-frame Inter-chr q37.1 p34.2 115650 ChimerSeq ChiTaRs ChiTaRs ALKBH3-ACTN2 ALKBH3 chr11 43903015 ACTN2 chr1 236891005 Exonic hg19 NA BX501306 Out-of-frame Inter-chr p11.2 q43 115651 ChimerSeq ChiTaRs ChiTaRs ATOX1-MAP7D3 ATOX1 chr5 151122445 MAP7D3 chrX 135301627 Exonic hg19 NA BI862136 Out-of-frame Inter-chr q33.1 q26.3 115652 ChimerSeq ChiTaRs ChiTaRs FCHO2-FCHO2 FCHO2 chr5 72373320 FCHO2 chr5 72354258 Exonic hg19 NA BE005026 Out-of-frame Intra-chr q13.2 q13.2 115653 ChimerSeq ChiTaRs ChiTaRs SYNCRIP-SYNCRIP SYNCRIP chr6 86322014 SYNCRIP chr6 86321871 Exonic hg19 NA AA846916 Out-of-frame Intra-chr q14.3 q14.3 115654 ChimerSeq ChiTaRs ChiTaRs NELL1-MYT1L NELL1 chr11 21407937 MYT1L chr2 1906781 Exonic hg19 NA T06926 Out-of-frame Inter-chr p15.1 p25.3 Transcription factor 115655 ChimerSeq ChiTaRs ChiTaRs MAP4K3-MAP4K3 MAP4K3 chr2 39664266 MAP4K3 chr2 39570529 Exonic hg19 NA AI885076 Out-of-frame Intra-chr p22.1 p22.1 115656 ChimerSeq ChiTaRs ChiTaRs SIX3-SIX3 SIX3 chr2 45172317 SIX3 chr2 45172305 Exonic hg19 NA BQ188356 Out-of-frame Intra-chr p21 Transcription factor p21 Transcription factor 115657 ChimerSeq ChiTaRs ChiTaRs TIAL1-DKK3 TIAL1 chr10 121335242 DKK3 chr11 12020287 Exonic hg19 NA AI057596 Out-of-frame Inter-chr q26.11 p15.3 Tumor suppressor gene 115658 ChimerSeq ChiTaRs ChiTaRs NEDD9-NEDD9 NEDD9 chr6 11185449 NEDD9 chr6 11185065 Exonic hg19 NA BM968296 Out-of-frame Intra-chr p24.2 p24.2 115659 ChimerSeq ChiTaRs ChiTaRs TLN1-TLN1 TLN1 chr9 35700362 TLN1 chr9 35698880 Exonic hg19 NA BI116596 Out-of-frame Intra-chr p13.3 p13.3 115660 ChimerSeq ChiTaRs ChiTaRs UCHL5-TARSL2 UCHL5 chr1 192981972 TARSL2 chr15 102201991 Exonic hg19 NA BE067206 Out-of-frame Inter-chr q31.2 q26.3 115661 ChimerSeq ChiTaRs ChiTaRs GPR124-ZNF593 GPR124 chr8 37701202 ZNF593 chr1 26496671 Exonic hg19 NA BM714876 Out-of-frame Inter-chr p36.11 115662 ChimerSeq ChiTaRs ChiTaRs SIX3-SIX3 SIX3 chr2 45172467 SIX3 chr2 45172101 Exonic hg19 NA CK299836 Out-of-frame Intra-chr p21 Transcription factor p21 Transcription factor 115663 ChimerSeq ChiTaRs ChiTaRs MIR548N-MIR548N MIR548N chr2 179417481 MIR548N chr2 179417474 Exonic hg19 NA Z24856 Out-of-frame Intra-chr p14.2 p14.2 115664 ChimerSeq ChiTaRs ChiTaRs AUTS2-TPPP3 AUTS2 chr7 69197280 TPPP3 chr16 67424425 Exonic hg19 NA BF995986 Out-of-frame Inter-chr q11.22 q22.1 115665 ChimerSeq ChiTaRs ChiTaRs CSNK1G3-CSNK1G3 CSNK1G3 chr5 122893258 CSNK1G3 chr5 122881109 Exonic hg19 NA AW582006 CDS-5'UTR Intra-chr q23.2 q23.2 115666 ChimerSeq ChiTaRs ChiTaRs CD74-NR6A1 CD74 chr5 149792319 NR6A1 chr9 127284839 Exonic hg19 NA U64876 Out-of-frame Inter-chr q33.1 q33.3 Transcription factor 115667 ChimerSeq ChiTaRs ChiTaRs CAMK2G-CAMK2G CAMK2G chr10 75574094 CAMK2G chr10 75574020 Exonic hg19 NA BU676896 Out-of-frame Intra-chr q22.2 q22.2 115668 ChimerSeq ChiTaRs ChiTaRs WBSCR16-WBSCR16 WBSCR16 chr7 74488564 WBSCR16 chr7 74486470 Exonic hg19 NA BF989446 Out-of-frame Intra-chr 115669 ChimerSeq ChiTaRs ChiTaRs IVNS1ABP-GRSF1 IVNS1ABP chr1 185266853 GRSF1 chr4 71685543 Exonic hg19 NA BE173356 Out-of-frame Inter-chr q25.3 q13.3 115670 ChimerSeq ChiTaRs ChiTaRs CPEB3-CPEB3 CPEB3 chr10 93987354 CPEB3 chr10 93988084 Exonic hg19 NA DW465696 Out-of-frame Intra-chr q23.32 q23.32 115671 ChimerSeq ChiTaRs ChiTaRs CYP1B1-CYP1B1 CYP1B1 chr2 38295677 CYP1B1 chr2 38295189 Exonic hg19 NA AA358226 Out-of-frame Intra-chr p22.2 p22.2 115672 ChimerSeq ChiTaRs ChiTaRs GSK3B-COX5A GSK3B chr3 119543447 COX5A chr15 75212635 Exonic hg19 NA BE538296 Out-of-frame Inter-chr q13.33 CMGC:GSK Tumor suppressor gene q24.2 115673 ChimerSeq ChiTaRs ChiTaRs ARHGAP24-ARHGAP24 ARHGAP24 chr4 86646342 ARHGAP24 chr4 86396528 Exonic hg19 NA AK130576 Out-of-frame Intra-chr q21.23 q21.23 115674 ChimerSeq ChiTaRs ChiTaRs CCDC93-DAB2IP CCDC93 chr2 118737147 DAB2IP chr9 124539432 Exonic hg19 NA BF370686 Out-of-frame Inter-chr q14.1 q33.2 Tumor suppressor gene 115675 ChimerSeq ChiTaRs ChiTaRs FNDC3B-PITPNC1 FNDC3B chr3 171887768 PITPNC1 chr17 65688763 Exonic hg19 NA AW752536 Out-of-frame Inter-chr q26.31 q24.2 115676 ChimerSeq ChiTaRs ChiTaRs DPCR1-DPCR1 DPCR1 chr6 2214391 DPCR1 chr6 2212815 Exonic hg19 NA AI674906 Out-of-frame Intra-chr 115677 ChimerSeq ChiTaRs ChiTaRs TNRC18-TNRC18 TNRC18 chr7 5346807 TNRC18 chr7 5346434 Exonic hg19 NA BG696996 Out-of-frame Intra-chr p22.1 p22.1 115678 ChimerSeq ChiTaRs ChiTaRs TGOLN2-C9orf89 TGOLN2 chr2 85546833 C9orf89 chr9 95872008 Exonic hg19 NA DB161016 Out-of-frame Inter-chr p11.2 115679 ChimerSeq ChiTaRs ChiTaRs LDB3-TUBB4A LDB3 chr10 88458454 TUBB4A chr19 6495154 Exonic hg19 NA BF946266 Out-of-frame Inter-chr q23.2 p13.3 115680 ChimerSeq ChiTaRs ChiTaRs SOX4-PSMD14 SOX4 chr6 21595892 PSMD14 chr2 162267816 Exonic hg19 NA BF590156 Out-of-frame Inter-chr p22.3 Transcription factor q24.2 115681 ChimerSeq ChiTaRs ChiTaRs DYNC1LI1-ZRANB3 DYNC1LI1 chr3 32612309 ZRANB3 chr2 135956858 Exonic hg19 NA BC064616 Out-of-frame Inter-chr p22.3 q21.3 115682 ChimerSeq ChiTaRs ChiTaRs RABGGTB-RABGGTB RABGGTB chr1 76255665 RABGGTB chr1 76255645 Exonic hg19 NA CN264416 Out-of-frame Intra-chr p31.1 p31.1 115683 ChimerSeq ChiTaRs ChiTaRs YME1L1-RTN1 YME1L1 chr10 27443300 RTN1 chr14 60062898 Exonic hg19 NA BM510146 Out-of-frame Inter-chr p12.1 q23.1 115684 ChimerSeq ChiTaRs ChiTaRs MDH2-MDH2 MDH2 chr7 75695679 MDH2 chr7 75695658 Exonic hg19 NA BF794536 Out-of-frame Intra-chr q11.23 q11.23 115685 ChimerSeq ChiTaRs ChiTaRs UBN2-TMEM41B UBN2 chr7 138987802 TMEM41B chr11 9311299 Exonic hg19 NA AW377636 Out-of-frame Inter-chr q34 p15.4 115686 ChimerSeq ChiTaRs ChiTaRs RPLP2-HBB RPLP2 chr11 812870 HBB chr11 5248004 Exonic hg19 NA AA367796 Out-of-frame Intra-chr p15.5 p15.4 115687 ChimerSeq ChiTaRs ChiTaRs DCDC5-R3HDM4 DCDC5 chr11 31059613 R3HDM4 chr19 896532 Exonic hg19 NA CN275196 Out-of-frame Inter-chr p13.3 115688 ChimerSeq ChiTaRs ChiTaRs BAI3-C1orf56 BAI3 chr6 69877477 C1orf56 chr1 151021208 Exonic hg19 NA AW452426 Out-of-frame Inter-chr q21.3 115689 ChimerSeq ChiTaRs ChiTaRs EZR-IFT43 EZR chr6 159228665 IFT43 chr14 76525237 Exonic hg19 NA BE090566 Out-of-frame Inter-chr q25.3 q24.3 115690 ChimerSeq ChiTaRs ChiTaRs CPNE4-ZDHHC5 CPNE4 chr3 131763793 ZDHHC5 chr11 57468162 Exonic hg19 NA BQ638056 Out-of-frame Inter-chr q22.1 q12.1 115691 ChimerSeq ChiTaRs ChiTaRs SLC22A23-SLC22A23 SLC22A23 chr6 3293475 SLC22A23 chr6 3293579 Exonic hg19 NA BE159486 Out-of-frame Intra-chr p25.2 p25.2 115692 ChimerSeq ChiTaRs ChiTaRs LOC389831-RNGTT LOC389831 chr7 86624 RNGTT chr6 89322440 Exonic hg19 NA DB131516 Out-of-frame Inter-chr q15 115693 ChimerSeq ChiTaRs ChiTaRs TCTN3-SLC4A8 TCTN3 chr10 97447379 SLC4A8 chr12 51903075 Exonic hg19 NA BE065656 Out-of-frame Inter-chr q24.1 q13.13 115694 ChimerSeq ChiTaRs ChiTaRs AGAP1-SORBS2 AGAP1 chr2 236702727 SORBS2 chr4 186506808 Exonic hg19 NA BE827936 Out-of-frame Inter-chr q37.2 q35.1 115695 ChimerSeq ChiTaRs ChiTaRs ST7-KIAA1462 ST7 chr7 116793921 KIAA1462 chr10 30337315 Exonic hg19 NA N41206 Out-of-frame Inter-chr q31.2 Tumor suppressor gene p11.23 115696 ChimerSeq ChiTaRs ChiTaRs SRSF3-SRSF3 SRSF3 chr6 36570986 SRSF3 chr6 36570964 Exonic hg19 NA BF337666 Out-of-frame Intra-chr p21.31 p21.31 115697 ChimerSeq ChiTaRs ChiTaRs FNIP2-NPHP3-ACAD11 FNIP2 chr4 159757259 NPHP3-ACAD11 chr3 132384669 Exonic hg19 NA AF367696 Out-of-frame Inter-chr q32.1 q22.1 115698 ChimerSeq ChiTaRs ChiTaRs ERICH1-GABRA3 ERICH1 chr8 617409 GABRA3 chrX 151361806 Exonic hg19 NA BI043226 Out-of-frame Inter-chr q28 115699 ChimerSeq ChiTaRs ChiTaRs GANAB-GANAB GANAB chr11 62392843 GANAB chr11 62392841 Exonic hg19 NA AA557976 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q12.3 Tumor suppressor gene 115700 ChimerSeq ChiTaRs ChiTaRs SLC39A13-SLC39A13 SLC39A13 chr11 47415653 SLC39A13 chr11 47428968 Exonic hg19 NA AW851656 Out-of-frame Intra-chr p11.2 p11.2 115701 ChimerSeq ChiTaRs ChiTaRs NMD3-NMD3 NMD3 chr3 160969546 NMD3 chr3 160969537 Exonic hg19 NA BM903576 Out-of-frame Intra-chr q26.1 q26.1 115702 ChimerSeq ChiTaRs ChiTaRs FLNB-ERN1 FLNB chr3 58094620 ERN1 chr17 62138848 Exonic hg19 NA BF370506 Out-of-frame Inter-chr p14.3 q23.3 115703 ChimerSeq ChiTaRs ChiTaRs VWA3B-VWA3B VWA3B chr2 98929407 VWA3B chr2 98929029 Exonic hg19 NA BU607596 Out-of-frame Intra-chr q11.2 q11.2 115704 ChimerSeq ChiTaRs ChiTaRs NFYC-RPLP2 NFYC chr1 41236424 RPLP2 chr11 809991 Exonic hg19 NA BP393246 Out-of-frame Inter-chr p34.2 Transcription factor p15.5 115705 ChimerSeq ChiTaRs ChiTaRs GPR157-SIGMAR1 GPR157 chr1 9175305 SIGMAR1 chr9 34634974 Exonic hg19 NA CA945116 Out-of-frame Inter-chr p36.22 p13.3 115706 ChimerSeq ChiTaRs ChiTaRs CNPPD1-CNPPD1 CNPPD1 chr2 220036822 CNPPD1 chr2 220036800 Exonic hg19 NA BF034466 Out-of-frame Intra-chr q35 q35 115707 ChimerSeq ChiTaRs ChiTaRs PSMD2-INPP1 PSMD2 chr3 184021818 INPP1 chr2 191236012 Exonic hg19 NA BE720196 Out-of-frame Inter-chr q27.1 q32.2 115708 ChimerSeq ChiTaRs ChiTaRs PPM1G-PPM1G PPM1G chr2 27607948 PPM1G chr2 27606822 Exonic hg19 NA BE732236 Out-of-frame Intra-chr p23.3 p23.3 115709 ChimerSeq ChiTaRs ChiTaRs NUCKS1-NUCKS1 NUCKS1 chr1 205686769 NUCKS1 chr1 205686810 Exonic hg19 NA AL708476 Out-of-frame Intra-chr q32.1 q32.1 115710 ChimerSeq ChiTaRs ChiTaRs HSD17B12-HSD17B12 HSD17B12 chr11 43716753 HSD17B12 chr11 43714781 Exonic hg19 NA CB218116 Out-of-frame Intra-chr p11.2 p11.2 115711 ChimerSeq ChiTaRs ChiTaRs SVIL-MNAT1 SVIL chr10 29992704 MNAT1 chr14 61386130 Exonic hg19 NA BF871006 Out-of-frame Inter-chr p11.23 q23.1 115712 ChimerSeq ChiTaRs ChiTaRs DHX36-DHX36 DHX36 chr3 154021151 DHX36 chr3 154012461 Exonic hg19 NA DN916446 Out-of-frame Intra-chr 115713 ChimerSeq ChiTaRs ChiTaRs GATAD2B-PTRF GATAD2B chr1 153871181 PTRF chr17 40555401 Exonic hg19 NA CB265526 Out-of-frame Inter-chr Transcription factor 115714 ChimerSeq ChiTaRs ChiTaRs PLAC1-PAX5 PLAC1 chrX 133742576 PAX5 chr9 36846840 Exonic hg19 NA T12626 Out-of-frame Inter-chr q26.3 p13.2 Oncogene Tumor suppressor gene Transcription factor 115715 ChimerSeq ChiTaRs ChiTaRs COMMD9-COMMD9 COMMD9 chr11 36296019 COMMD9 chr11 36295543 Exonic hg19 NA BI772756 Out-of-frame Intra-chr p13 p13 115716 ChimerSeq ChiTaRs ChiTaRs ATP6AP2-APC ATP6AP2 chrX 40465246 APC chr5 112178950 Exonic hg19 NA BQ348746 Out-of-frame Inter-chr p11.4 q22.2 Oncogene Tumor suppressor gene 115717 ChimerSeq ChiTaRs ChiTaRs RGS5-RGS5 RGS5 chr1 163112435 RGS5 chr1 163112090 Exonic hg19 NA BI491626 Out-of-frame Intra-chr q23.3 q23.3 115718 ChimerSeq ChiTaRs ChiTaRs RGL2-RGL2 RGL2 chr6 4492035 RGL2 chr6 4492288 Exonic hg19 NA BE159416 Out-of-frame Intra-chr 115719 ChimerSeq ChiTaRs ChiTaRs LIMK1-LIMK1 LIMK1 chr7 73536612 LIMK1 chr7 73531613 Exonic hg19 NA AK125156 Out-of-frame Intra-chr q11.23 TKL:LISK q11.23 TKL:LISK 115720 ChimerSeq ChiTaRs ChiTaRs EXOC6B-MYH11 EXOC6B chr2 72607004 MYH11 chr16 15869615 Exonic hg19 NA BQ356246 Out-of-frame Inter-chr p13.2 Oncogene 115721 ChimerSeq ChiTaRs ChiTaRs HS6ST2-NDUFB2 HS6ST2 chrX 132040242 NDUFB2 chr7 140404657 Exonic hg19 NA BE940466 Out-of-frame Inter-chr q26.2 q34 115722 ChimerSeq ChiTaRs ChiTaRs MEST-MEST MEST chr7 130144831 MEST chr7 130135276 Exonic hg19 NA DA568356 Out-of-frame Intra-chr q32.2 q32.2 115723 ChimerSeq ChiTaRs ChiTaRs RARS-RARS RARS chr5 167921632 RARS chr5 167929004 Exonic hg19 NA BE714426 Out-of-frame Intra-chr q34 q34 115724 ChimerSeq ChiTaRs ChiTaRs COL7A1-CES4A COL7A1 chr3 48601644 CES4A chr16 67043577 Exonic hg19 NA BU198036 Out-of-frame Inter-chr p21.31 q22.1 115725 ChimerSeq ChiTaRs ChiTaRs SPARC-SPARC SPARC chr5 151049347 SPARC chr5 151051152 Exonic hg19 NA BX118986 Out-of-frame Intra-chr q33.1 Tumor suppressor gene q33.1 Tumor suppressor gene 115726 ChimerSeq ChiTaRs ChiTaRs BAZ2B-LRRC7 BAZ2B chr2 160447907 LRRC7 chr1 70423880 Exonic hg19 NA AW798556 Out-of-frame Inter-chr q24.2 Transcription factor p31.1 115727 ChimerSeq ChiTaRs ChiTaRs S100A9-VAT1L S100A9 chr1 153333461 VAT1L chr16 77987596 Exonic hg19 NA BF736986 Out-of-frame Inter-chr q21.3 q23.1 115728 ChimerSeq ChiTaRs ChiTaRs STX3-STX3 STX3 chr11 59554503 STX3 chr11 59554561 Exonic hg19 NA W28076 Out-of-frame Intra-chr q12.1 q12.1 115729 ChimerSeq ChiTaRs ChiTaRs CEP44-PRLR CEP44 chr4 175223781 PRLR chr5 35195131 Exonic hg19 NA BG184506 Out-of-frame Inter-chr q34.1 p13.2 115730 ChimerSeq ChiTaRs ChiTaRs BAG3-BAG3 BAG3 chr10 121437308 BAG3 chr10 121436769 Exonic hg19 NA CA313066 Out-of-frame Intra-chr q26.11 q26.11 115731 ChimerSeq ChiTaRs ChiTaRs HOOK1-HOOK1 HOOK1 chr1 60336031 HOOK1 chr1 60335738 Exonic hg19 NA AA491736 Out-of-frame Intra-chr p32.1 p32.1 115732 ChimerSeq ChiTaRs ChiTaRs CCDC93-SEPT2 CCDC93 chr2 118737396 2002_ 9_ 1_ chr2 242273971 Exonic hg19 NA CV412896 Out-of-frame Intra-chr q14.1 115733 ChimerSeq ChiTaRs ChiTaRs FNBP4-SKP1 FNBP4 chr11 47748796 SKP1 chr5 133510026 Exonic hg19 NA AI793256 Out-of-frame Inter-chr p11.2 q31.1 115734 ChimerSeq ChiTaRs ChiTaRs ASTN2-MFAP4 ASTN2 chr9 119942968 MFAP4 chr17 19287702 Exonic hg19 NA BE044246 Out-of-frame Inter-chr q33.1 p11.2 115735 ChimerSeq ChiTaRs ChiTaRs FTH1-FBL FTH1 chr11 61735083 FBL chr19 40328352 Exonic hg19 NA BQ230476 Out-of-frame Inter-chr q12.3 115736 ChimerSeq ChiTaRs ChiTaRs SOX4-SOX4 SOX4 chr6 21594367 SOX4 chr6 21596527 Exonic hg19 NA AW207656 Out-of-frame Intra-chr p22.3 Transcription factor p22.3 Transcription factor 115737 ChimerSeq ChiTaRs ChiTaRs PNPLA2-GHITM PNPLA2 chr11 822552 GHITM chr10 85912193 Exonic hg19 NA BI017246 Out-of-frame Inter-chr p15.5 q23.1 115738 ChimerSeq ChiTaRs ChiTaRs GOLPH3-RAB11FIP1 GOLPH3 chr5 32171792 RAB11FIP1 chr8 37719409 Exonic hg19 NA BU754126 Out-of-frame Inter-chr p13.3 p11.23 115739 ChimerSeq ChiTaRs ChiTaRs UBE2D2-UBE2D2 UBE2D2 chr5 139007277 UBE2D2 chr5 139006769 Exonic hg19 NA BU685296 Out-of-frame Intra-chr q31.2 q31.2 115740 ChimerSeq ChiTaRs ChiTaRs PBX1-PBX1 PBX1 chr1 164580286 PBX1 chr1 164580019 Exonic hg19 NA BG949786 Out-of-frame Intra-chr q23.3 Oncogene Transcription factor q23.3 Oncogene Transcription factor 115741 ChimerSeq ChiTaRs ChiTaRs KIN-KIN KIN chr10 7822855 KIN chr10 7827398 Exonic hg19 NA CV376786 Out-of-frame Intra-chr p14 Transcription factor p14 Transcription factor 115742 ChimerSeq ChiTaRs ChiTaRs NKIRAS1-TGOLN2 NKIRAS1 chr3 23962333 TGOLN2 chr2 85554240 Exonic hg19 NA AI675786 Out-of-frame Inter-chr p24.2 p11.2 115743 ChimerSeq ChiTaRs ChiTaRs EXOSC2-EXOSC2 EXOSC2 chr9 133579337 EXOSC2 chr9 133579089 Exonic hg19 NA BF155556 Out-of-frame Intra-chr q34.12 q34.12 115744 ChimerSeq ChiTaRs ChiTaRs CASK-NPR2 CASK chrX 41441441 NPR2 chr9 35792152 Exonic hg19 NA L13436 Out-of-frame Inter-chr p11.4 CAMK:CASK p13.3 Tumor suppressor gene 115745 ChimerSeq ChiTaRs ChiTaRs WDR13-TMEM201 WDR13 chrX 48463504 TMEM201 chr1 9667338 Exonic hg19 NA AA934896 Out-of-frame Inter-chr p11.23 p36.22 115746 ChimerSeq ChiTaRs ChiTaRs ANXA8-EPG5 ANXA8 chr10 47122392 EPG5 chr18 43429612 Exonic hg19 NA L44366 Out-of-frame Inter-chr q11.22 q21.1 115747 ChimerSeq ChiTaRs ChiTaRs SYTL3-SYTL3 SYTL3 chr6 159185858 SYTL3 chr6 159185850 Exonic hg19 NA AA593226 Out-of-frame Intra-chr q25.3 q25.3 115748 ChimerSeq ChiTaRs ChiTaRs P4HTM-ARHGAP35 P4HTM chr3 49039435 ARHGAP35 chr19 47504826 Exonic hg19 NA BQ322556 Out-of-frame Inter-chr p21.31 q13.32 Transcription factor 115749 ChimerSeq ChiTaRs ChiTaRs TSNAX-ENOPH1 TSNAX chr1 231700892 ENOPH1 chr4 83368350 Exonic hg19 NA BC000236 Out-of-frame Inter-chr q42.2 q21.22 115750 ChimerSeq ChiTaRs ChiTaRs CCDC50-CCDC50 CCDC50 chr3 191109745 CCDC50 chr3 191109712 Exonic hg19 NA BQ227076 Out-of-frame Intra-chr q28 q28 115751 ChimerSeq ChiTaRs ChiTaRs MIR548N-MIR548N MIR548N chr2 179414856 MIR548N chr2 179414087 Exonic hg19 NA AA194306 Out-of-frame Intra-chr p14.2 p14.2 115752 ChimerSeq ChiTaRs ChiTaRs HLA-DMB-HLA-DMB HLA-DMB chr6 4333891 HLA-DMB chr6 4339337 Exonic hg19 NA AW404996 Out-of-frame Intra-chr 115753 ChimerSeq ChiTaRs ChiTaRs C4orf45-TEX101 C4orf45 chr4 159942809 TEX101 chr19 43919083 Exonic hg19 NA AF353396 Out-of-frame Inter-chr q32.1 q13.31 115754 ChimerSeq ChiTaRs ChiTaRs CCDC72-CCND1 CCDC72 chr3 48482107 CCND1 chr11 69468030 Exonic hg19 NA BE926376 Out-of-frame Inter-chr q13.3 Oncogene 115755 ChimerSeq ChiTaRs ChiTaRs TSG101-C10orf11 TSG101 chr11 18505515 C10orf11 chr10 77676750 Exonic hg19 NA BE708176 Out-of-frame Inter-chr p15.1 Tumor suppressor gene 115756 ChimerSeq ChiTaRs ChiTaRs FAM19A1-LYST FAM19A1 chr3 68550039 LYST chr1 235992147 Exonic hg19 NA CR745606 Out-of-frame Inter-chr p14.1 q42.3 115757 ChimerSeq ChiTaRs ChiTaRs COLQ-KLC2 COLQ chr3 15492919 KLC2 chr11 66029416 Exonic hg19 NA BG009216 Out-of-frame Inter-chr p25.1 q13.2 115758 ChimerSeq ChiTaRs ChiTaRs PRAF2-TPP1 PRAF2 chrX 48933124 TPP1 chr11 6635321 Exonic hg19 NA BQ345796 Out-of-frame Inter-chr p11.23 p15.4 115759 ChimerSeq ChiTaRs ChiTaRs PTPRZ1-PTPRZ1 PTPRZ1 chr7 121652459 PTPRZ1 chr7 121652442 Exonic hg19 NA AW149516 Out-of-frame Intra-chr q31.32 q31.32 115760 ChimerSeq ChiTaRs ChiTaRs YY1AP1-TOMM7 YY1AP1 chr1 155629732 TOMM7 chr7 22862352 Exonic hg19 NA BU951526 Out-of-frame Inter-chr q22 p15.3 115761 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-MYH3 INS-IGF2 chr11 2150443 MYH3 chr17 10534999 Exonic hg19 NA AI290406 Out-of-frame Inter-chr p15.5 p13.1 Oncogene 115762 ChimerSeq ChiTaRs ChiTaRs LOC93622-FARS2 LOC93622 chr4 6677090 FARS2 chr6 5452360 Exonic hg19 NA BF091396 Out-of-frame Inter-chr p25.1 115763 ChimerSeq ChiTaRs ChiTaRs CLSPN-CLSPN CLSPN chr1 36215283 CLSPN chr1 36216978 Exonic hg19 NA BE931476 Out-of-frame Intra-chr p34.3 p34.3 115764 ChimerSeq ChiTaRs ChiTaRs FLJ44635-BTBD9 FLJ44635 chrX 71368507 BTBD9 chr6 38139201 Exonic hg19 NA AA485466 Out-of-frame Inter-chr p21.2 115765 ChimerSeq ChiTaRs ChiTaRs CCDC171-SARS CCDC171 chr9 15764404 SARS chr1 109780357 Exonic hg19 NA BF378126 Out-of-frame Inter-chr p22.3 p13.3 115766 ChimerSeq ChiTaRs ChiTaRs UBE3C-SEPT11 UBE3C chr7 157007838 2011_ 9_ 1_ chr4 77956371 Exonic hg19 NA BE008856 Out-of-frame Inter-chr q36.3 115767 ChimerSeq ChiTaRs ChiTaRs TAL1-TGM2 TAL1 chr1 47694111 TGM2 chr20 36757621 Exonic hg19 NA R97066 Out-of-frame Inter-chr p33 Oncogene Transcription factor q11.23 115768 ChimerSeq ChiTaRs ChiTaRs ZNF804A-CNTN1 ZNF804A chr2 185679010 CNTN1 chr12 41266373 Exonic hg19 NA BF983866 Out-of-frame Inter-chr q32.1 Transcription factor q12 115769 ChimerSeq ChiTaRs ChiTaRs MARCKS-MARCKS MARCKS chr6 114181366 MARCKS chr6 114181780 Exonic hg19 NA AW451126 Out-of-frame Intra-chr q21 Tumor suppressor gene q21 Tumor suppressor gene 115770 ChimerSeq ChiTaRs ChiTaRs COL8A2-FHAD1 COL8A2 chr1 36561410 FHAD1 chr1 15655879 Exonic hg19 NA BM707746 Out-of-frame Intra-chr p34.3 p36.21 115771 ChimerSeq ChiTaRs ChiTaRs GNAI1-MALAT1 GNAI1 chr7 79848600 MALAT1 chr11 65269640 Exonic hg19 NA AI982766 Out-of-frame Inter-chr q21.11 q13.1 115772 ChimerSeq ChiTaRs ChiTaRs RASSF4-DES RASSF4 chr10 45472180 DES chr2 220290801 Exonic hg19 NA F00836 Out-of-frame Inter-chr q11.21 Tumor suppressor gene q35 115773 ChimerSeq ChiTaRs ChiTaRs CBLB-CBLB CBLB chr3 105399438 CBLB chr3 105398984 Exonic hg19 NA AW805816 Out-of-frame Intra-chr q13.11 q13.11 115774 ChimerSeq ChiTaRs ChiTaRs TNC-TNC TNC chr9 117822036 TNC chr9 117822057 Exonic hg19 NA AW993656 Out-of-frame Intra-chr q33.1 q33.1 115775 ChimerSeq ChiTaRs ChiTaRs PAPPA-DTWD2 PAPPA chr9 119161166 DTWD2 chr5 118309671 Exonic hg19 NA BG261136 Out-of-frame Inter-chr q33.1 q23.1 115776 ChimerSeq ChiTaRs ChiTaRs AHNAK-TPD52 AHNAK chr11 62288450 TPD52 chr8 81035516 Exonic hg19 NA BF990876 Out-of-frame Inter-chr q12.3 Tumor suppressor gene q21.13 115777 ChimerSeq ChiTaRs ChiTaRs DCAF8-DCAF8 DCAF8 chr1 160248120 DCAF8 chr1 160248110 Exonic hg19 NA CA450406 Out-of-frame Intra-chr q23.2 q23.2 115778 ChimerSeq ChiTaRs ChiTaRs SERP1-UNK SERP1 chr3 150261287 UNK chr17 73787306 Exonic hg19 NA BE161616 Out-of-frame Inter-chr q25.1 q25.1 115779 ChimerSeq ChiTaRs ChiTaRs MYC-BZRAP1-AS1 MYC chr8 128750636 BZRAP1-AS1 chr17 56409242 Exonic hg19 NA AB213413 Out-of-frame Inter-chr q24.21 Oncogene Transcription factor 115780 ChimerSeq ChiTaRs ChiTaRs RC3H1-RC3H1 RC3H1 chr1 173907628 RC3H1 chr1 173907689 Exonic hg19 NA DW438066 Out-of-frame Intra-chr q25.1 q25.1 115781 ChimerSeq ChiTaRs ChiTaRs ZEB2-PAFAH2 ZEB2 chr2 145267586 PAFAH2 chr1 26286260 Exonic hg19 NA AK129536 Out-of-frame Inter-chr q22.3 Transcription factor p36.11 115782 ChimerSeq ChiTaRs ChiTaRs HIST2H2BE-CAPZA1 HIST2H2BE chr1 149858232 CAPZA1 chr1 113162452 Exonic hg19 NA DA420196 5'UTR-5'UTR Intra-chr q21.2 p13.2 115783 ChimerSeq ChiTaRs ChiTaRs FNTA-FNTA FNTA chr8 42937233 FNTA chr8 42937814 Exonic hg19 NA AA833856 Out-of-frame Intra-chr p11.21 p11.21 115784 ChimerSeq ChiTaRs ChiTaRs PPP2R2A-PPP2R2A PPP2R2A chr8 26228984 PPP2R2A chr8 26228929 Exonic hg19 NA AL050206 Out-of-frame Intra-chr p21.2 p21.2 115785 ChimerSeq ChiTaRs ChiTaRs REEP1-STXBP1 REEP1 chr2 86442071 STXBP1 chr9 130453518 Exonic hg19 NA AI014296 Out-of-frame Inter-chr p11.2 q34.11 115786 ChimerSeq ChiTaRs ChiTaRs B3GAT3-ATP1B2 B3GAT3 chr11 62382807 ATP1B2 chr17 7558922 Exonic hg19 NA BU738636 Out-of-frame Inter-chr q12.3 p13.1 115787 ChimerSeq ChiTaRs ChiTaRs DNAH1-NGFRAP1 DNAH1 chr3 52369148 NGFRAP1 chrX 102632669 Exonic hg19 NA AW015906 Out-of-frame Inter-chr p21.1 115788 ChimerSeq ChiTaRs ChiTaRs TRIM2-MLL TRIM2 chr4 154180822 MLL chr11 118326096 Exonic hg19 NA BE142546 Out-of-frame Inter-chr q31.3 q23.3 115789 ChimerSeq ChiTaRs ChiTaRs TBC1D9B-KIF13A TBC1D9B chr5 179289957 KIF13A chr6 17826007 Exonic hg19 NA BF001556 Out-of-frame Inter-chr p22.3 115790 ChimerSeq ChiTaRs ChiTaRs COL3A1-COL3A1 COL3A1 chr2 189875608 COL3A1 chr2 189875006 Exonic hg19 NA BE170276 Out-of-frame Intra-chr q32.2 q32.2 115791 ChimerSeq ChiTaRs ChiTaRs KMO-MALAT1 KMO chr1 241749484 MALAT1 chr11 65266714 Exonic hg19 NA BG573396 Out-of-frame Inter-chr q43 q13.1 115792 ChimerSeq ChiTaRs ChiTaRs COL1A2-COL1A2 COL1A2 chr7 94060539 COL1A2 chr7 94060014 Exonic hg19 NA BI491586 Out-of-frame Intra-chr q21.3 q21.3 115793 ChimerSeq ChiTaRs ChiTaRs HIST1H3F-TACC2 HIST1H3F chr6 26250853 TACC2 chr10 123936625 Exonic hg19 NA DA602236 Out-of-frame Inter-chr p22.2 q26.13 115794 ChimerSeq ChiTaRs ChiTaRs PPWD1-GABRE PPWD1 chr5 64872748 GABRE chrX 151126939 Exonic hg19 NA BF993166 Out-of-frame Inter-chr q12.3 q28 115795 ChimerSeq ChiTaRs ChiTaRs C1orf116-C1orf116 C1orf116 chr1 207196123 C1orf116 chr1 207196126 Exonic hg19 NA BQ328966 Out-of-frame Intra-chr q32.1 q32.1 115796 ChimerSeq ChiTaRs ChiTaRs CD74-CD74 CD74 chr5 149781367 CD74 chr5 149781346 Exonic hg19 NA H42916 Out-of-frame Intra-chr q33.1 q33.1 115797 ChimerSeq ChiTaRs ChiTaRs LOC100302640-CD164 LOC100302640 chr3 106830429 CD164 chr6 109687723 Exonic hg19 NA C16646 Out-of-frame Inter-chr q21 115798 ChimerSeq ChiTaRs ChiTaRs FOXK1-SDHB FOXK1 chr7 4809510 SDHB chr1 17354572 Exonic hg19 NA BF840536 Out-of-frame Inter-chr p22.1 Transcription factor p36.13 Oncogene Tumor suppressor gene 115799 ChimerSeq ChiTaRs ChiTaRs ABCC10-MAN2A2 ABCC10 chr6 43407711 MAN2A2 chr15 91457544 Exonic hg19 NA BE145876 Out-of-frame Inter-chr p21.1 q26.1 115800 ChimerSeq ChiTaRs ChiTaRs SSPO-FLJ23867 SSPO chr7 149493964 FLJ23867 chr1 180167272 Exonic hg19 NA AW372846 Out-of-frame Inter-chr q36.1 115801 ChimerSeq ChiTaRs ChiTaRs HDAC4-NBPF9 HDAC4 chr2 240085481 NBPF9 chr1 144594047 Exonic hg19 NA AF370406 Out-of-frame Inter-chr q37.3 q21.2 115802 ChimerSeq ChiTaRs ChiTaRs SMG7-FBXL20 SMG7 chr1 183463949 FBXL20 chr17 37525934 Exonic hg19 NA H80346 Out-of-frame Inter-chr q25.3 q12 115803 ChimerSeq ChiTaRs ChiTaRs ALDH1A1-ALDH1A1 ALDH1A1 chr9 75515698 ALDH1A1 chr9 75515748 Exonic hg19 NA BU674486 Out-of-frame Intra-chr q21.13 q21.13 115804 ChimerSeq ChiTaRs ChiTaRs RHOC-SPIDR RHOC chr1 113244200 SPIDR chr8 48616387 Exonic hg19 NA BF927466 Out-of-frame Inter-chr p13.2 q11.21 115805 ChimerSeq ChiTaRs ChiTaRs IDH3G-PKP2 IDH3G chrX 153051428 PKP2 chr12 32949101 Exonic hg19 NA AW390706 Out-of-frame Inter-chr q28 p11.21 115806 ChimerSeq ChiTaRs ChiTaRs DOCK1-TFDP2 DOCK1 chr10 128982512 TFDP2 chr3 141671209 Exonic hg19 NA BF904716 Out-of-frame Inter-chr q26.2 q23 Transcription factor 115807 ChimerSeq ChiTaRs ChiTaRs KCNIP3-PDE2A KCNIP3 chr2 95979644 PDE2A chr11 72361084 Exonic hg19 NA AB209076 Out-of-frame Inter-chr q11.1 Transcription factor q13.4 115808 ChimerSeq ChiTaRs ChiTaRs NCSTN-CYP19A1 NCSTN chr1 160317420 CYP19A1 chr15 51514138 Exonic hg19 NA AA677716 Out-of-frame Inter-chr q23.2 q21.2 115809 ChimerSeq ChiTaRs ChiTaRs C6orf89-C6orf89 C6orf89 chr6 36894909 C6orf89 chr6 36894917 Exonic hg19 NA AI282416 Out-of-frame Intra-chr p21.2 p21.2 115810 ChimerSeq ChiTaRs ChiTaRs HLA-DQB1-PSD4 HLA-DQB1 chr6 32629093 PSD4 chr2 113960154 Exonic hg19 NA BF829776 Out-of-frame Inter-chr q14.1 115811 ChimerSeq ChiTaRs ChiTaRs CACNA2D1-CACNA2D1 CACNA2D1 chr7 81890998 CACNA2D1 chr7 81890737 Exonic hg19 NA AA491946 Out-of-frame Intra-chr q21.11 q21.11 115812 ChimerSeq ChiTaRs ChiTaRs ATG7-SKAP2 ATG7 chr3 11473625 SKAP2 chr7 26707708 Exonic hg19 NA H72466 Out-of-frame Inter-chr p25.3 p15.2 115813 ChimerSeq ChiTaRs ChiTaRs MYL1-TGFBR2 MYL1 chr2 211168339 TGFBR2 chr3 30734477 Exonic hg19 NA BF670326 5'UTR-3'UTR Inter-chr q34 p24.1 Oncogene Tumor suppressor gene 115814 ChimerSeq ChiTaRs ChiTaRs CREM-SEC61G CREM chr10 35500735 SEC61G chr7 54819946 Exonic hg19 NA BP384146 Out-of-frame Inter-chr p11.21 Tumor suppressor gene Transcription factor p11.2 115815 ChimerSeq ChiTaRs ChiTaRs BTC-SPIN1 BTC chr4 75719896 SPIN1 chr9 91083284 Exonic hg19 NA BI758136 Out-of-frame Inter-chr q13.3 q22.1 115816 ChimerSeq ChiTaRs ChiTaRs HNRNPK-NCOR2 HNRNPK chr9 86586958 NCOR2 chr12 124808961 Exonic hg19 NA U37146 Out-of-frame Inter-chr q21.32 q24.31 115817 ChimerSeq ChiTaRs ChiTaRs CAMTA1-CDK17 CAMTA1 chr1 6892191 CDK17 chr12 96767305 Exonic hg19 NA AL598376 Out-of-frame Inter-chr p36.31 Tumor suppressor gene Transcription factor q23.1 115818 ChimerSeq ChiTaRs ChiTaRs FAM50A-HK2 FAM50A chrX 153678996 HK2 chr2 75061284 Exonic hg19 NA Z46376 Out-of-frame Inter-chr q28 p12 115819 ChimerSeq ChiTaRs ChiTaRs MIR548N-HRC MIR548N chr2 179432065 HRC chr19 49654458 Exonic hg19 NA AK129876 Out-of-frame Inter-chr p14.2 q13.33 115820 ChimerSeq ChiTaRs ChiTaRs DLEC1-EXOC6B DLEC1 chr3 38157339 EXOC6B chr2 72432119 Exonic hg19 NA BF997326 Out-of-frame Inter-chr p22.2 Tumor suppressor gene p13.2 115821 ChimerSeq ChiTaRs ChiTaRs DIRC2-CFLAR DIRC2 chr3 122514840 CFLAR chr2 201998619 Exonic hg19 NA R71296 Out-of-frame Inter-chr q21.1 q33.1 115822 ChimerSeq ChiTaRs ChiTaRs COL6A3-POSTN COL6A3 chr2 238233218 POSTN chr13 38153223 Exonic hg19 NA BE160966 Out-of-frame Inter-chr q37.3 q13.3 115823 ChimerSeq ChiTaRs ChiTaRs FIP1L1-FIP1L1 FIP1L1 chr4 54282394 FIP1L1 chr4 54262298 Exonic hg19 NA AJ708056 Out-of-frame Intra-chr q12 q12 115824 ChimerSeq ChiTaRs ChiTaRs KIF3C-SGK1 KIF3C chr2 26174618 SGK1 chr6 134561771 Exonic hg19 NA BF364236 Out-of-frame Inter-chr p23.3 q23.2 AGC:SGK Oncogene 115825 ChimerSeq ChiTaRs ChiTaRs SNHG3-PARL SNHG3 chr1 28834672 PARL chr3 183558358 Exonic hg19 NA CB145466 5'UTR-CDS Inter-chr p35.3 q27.1 115826 ChimerSeq ChiTaRs ChiTaRs AFF3-EIF5B AFF3 chr2 100759048 EIF5B chr2 99976698 Exonic hg19 NA DA619466 5'UTR-CDS Intra-chr q11.2 Oncogene q11.2 115827 ChimerSeq ChiTaRs ChiTaRs ANKMY1-SIK3 ANKMY1 chr2 241497514 SIK3 chr11 116716128 Exonic hg19 NA AB023216 Out-of-frame Inter-chr q37.3 q23.3 115828 ChimerSeq ChiTaRs ChiTaRs ARFGEF1-ARFGEF1 ARFGEF1 chr8 68214703 ARFGEF1 chr8 68200190 Exonic hg19 NA BQ379416 Out-of-frame Intra-chr q13.2 q13.2 115829 ChimerSeq ChiTaRs ChiTaRs GSK3B-ST6GALNAC5 GSK3B chr3 119545243 ST6GALNAC5 chr1 77398571 Exonic hg19 NA DA572046 Out-of-frame Inter-chr q13.33 CMGC:GSK Tumor suppressor gene p31.1 115830 ChimerSeq ChiTaRs ChiTaRs WDSUB1-ILF2 WDSUB1 chr2 160125408 ILF2 chr1 153637757 Exonic hg19 NA AW999616 Out-of-frame Inter-chr q24.2 q21.3 115831 ChimerSeq ChiTaRs ChiTaRs H6PD-PEX14 H6PD chr1 9331392 PEX14 chr1 10659966 Exonic hg19 NA AA701256 Out-of-frame Intra-chr p36.22 p36.22 115832 ChimerSeq ChiTaRs ChiTaRs ACTR1A-ACTR1A ACTR1A chr10 104245471 ACTR1A chr10 104247893 Exonic hg19 NA BI006066 Out-of-frame Intra-chr q24.32 q24.32 115833 ChimerSeq ChiTaRs ChiTaRs LMO4-UROD LMO4 chr1 87811091 UROD chr1 45481176 Exonic hg19 NA BM718816 Out-of-frame Intra-chr p22.3 p34.1 115834 ChimerSeq ChiTaRs ChiTaRs ZNF670-ZNF695-SCCPDH ZNF670-ZNF695 chr1 247242115 SCCPDH chr1 246907377 Exonic hg19 NA DA077906 Out-of-frame Intra-chr q44 Transcription factor q44 Transcription factor 115835 ChimerSeq ChiTaRs ChiTaRs TLR8-AS1-AASS TLR8-AS1 chrX 12939444 AASS chr7 121715713 Exonic hg19 NA BX282586 Out-of-frame Inter-chr p22.2 q31.32 Tumor suppressor gene 115836 ChimerSeq ChiTaRs ChiTaRs MIR205HG-PAPPA MIR205HG chr1 209605885 PAPPA chr9 119160285 Exonic hg19 NA AA368136 Out-of-frame Inter-chr q32.2 q33.1 115837 ChimerSeq ChiTaRs ChiTaRs RAPGEF1-BOLA2 RAPGEF1 chr9 134453934 BOLA2 chr16 29982774 Exonic hg19 NA BI011926 Out-of-frame Inter-chr q34.13 p11.2 115838 ChimerSeq ChiTaRs ChiTaRs ABCA13-VEPH1 ABCA13 chr7 48529412 VEPH1 chr3 157082111 Exonic hg19 NA BI022466 Out-of-frame Inter-chr p12.3 q25.32 115839 ChimerSeq ChiTaRs ChiTaRs LRSAM1-PER2 LRSAM1 chr9 130259185 PER2 chr2 239179729 Exonic hg19 NA BF752946 Out-of-frame Inter-chr q33.3 q37.3 Tumor suppressor gene 115840 ChimerSeq ChiTaRs ChiTaRs LSAMP-CRHR2 LSAMP chr3 115903676 CRHR2 chr7 30692802 Exonic hg19 NA D44636 Out-of-frame Inter-chr q13.31 Tumor suppressor gene p14.3 115841 ChimerSeq ChiTaRs ChiTaRs AKT3-ANK3 AKT3 chr1 243762556 ANK3 chr10 61789448 Exonic hg19 NA BE708406 Out-of-frame Inter-chr AGC:Akt Oncogene q21.2 115842 ChimerSeq ChiTaRs ChiTaRs XIAP-HSP90AB1 XIAP chrX 123041522 HSP90AB1 chr6 44221529 Exonic hg19 NA BU945016 Out-of-frame Inter-chr q25 p21.1 Oncogene 115843 ChimerSeq ChiTaRs ChiTaRs S100A6-GNB2L1 S100A6 chr1 153508445 GNB2L1 chr5 180663929 Exonic hg19 NA AY159316 Out-of-frame Inter-chr q21.3 Tumor suppressor gene 115844 ChimerSeq ChiTaRs ChiTaRs ARHGAP30-ARHGAP30 ARHGAP30 chr1 161016873 ARHGAP30 chr1 161017004 Exonic hg19 NA AW408146 Out-of-frame Intra-chr q23.3 q23.3 115845 ChimerSeq ChiTaRs ChiTaRs MLL5-MLL5 MLL5 chr7 104752683 MLL5 chr7 104752303 Exonic hg19 NA W27516 Out-of-frame Intra-chr 115846 ChimerSeq ChiTaRs ChiTaRs ARHGAP6-BACH2 ARHGAP6 chrX 11155837 BACH2 chr6 90651070 Exonic hg19 NA AI817616 Out-of-frame Inter-chr p22.2 q15 Transcription factor 115847 ChimerSeq ChiTaRs ChiTaRs RBM48-DLG1 RBM48 chr7 92163761 DLG1 chr3 196772736 Exonic hg19 NA BE152396 Out-of-frame Inter-chr q21.2 q29 Tumor suppressor gene 115848 ChimerSeq ChiTaRs ChiTaRs TTC17-TNFRSF1A TTC17 chr11 43395632 TNFRSF1A chr12 6441862 Exonic hg19 NA AW753226 Out-of-frame Inter-chr p12 p13.31 115849 ChimerSeq ChiTaRs ChiTaRs TRAPPC11-TRAPPC11 TRAPPC11 chr4 184629646 TRAPPC11 chr4 184629626 Exonic hg19 NA AL133076 Out-of-frame Intra-chr q35.1 q35.1 115850 ChimerSeq ChiTaRs ChiTaRs LARP4B-LARP4B LARP4B chr10 881628 LARP4B chr10 881445 Exonic hg19 NA BF328296 Out-of-frame Intra-chr p15.3 p15.3 115851 ChimerSeq ChiTaRs ChiTaRs ABHD17B-ABHD17B ABHD17B chr9 74489632 ABHD17B chr9 74481630 Exonic hg19 NA CN413546 Out-of-frame Intra-chr q21.13 q21.13 115852 ChimerSeq ChiTaRs ChiTaRs ADCYAP1R1-ADCYAP1R1 ADCYAP1R1 chr7 31092293 ADCYAP1R1 chr7 31102809 Exonic hg19 NA D17516 5'UTR-5'UTR Intra-chr p14.3 p14.3 115853 ChimerSeq ChiTaRs ChiTaRs PAPPA-DCAF7 PAPPA chr9 119005755 DCAF7 chr17 61671037 Exonic hg19 NA BF987676 Out-of-frame Inter-chr q33.1 q23.3 115854 ChimerSeq ChiTaRs ChiTaRs DNAH1-UBE2J2 DNAH1 chr3 52425071 UBE2J2 chr1 1205855 Exonic hg19 NA BF878256 Out-of-frame Inter-chr p21.1 p36.33 115855 ChimerSeq ChiTaRs ChiTaRs ABP1-COL4A2 ABP1 chr7 150558254 COL4A2 chr13 110960447 Exonic hg19 NA BF991446 Out-of-frame Inter-chr q34 115856 ChimerSeq ChiTaRs ChiTaRs SIPA1L2-ZNF41 SIPA1L2 chr1 232586486 ZNF41 chrX 47323472 Exonic hg19 NA BG986926 Out-of-frame Inter-chr q42.2 p11.3 Transcription factor 115857 ChimerSeq ChiTaRs ChiTaRs CCT4-CCT4 CCT4 chr2 62100383 CCT4 chr2 62099409 Exonic hg19 NA BM918916 Out-of-frame Intra-chr p15 p15 115858 ChimerSeq ChiTaRs ChiTaRs DDX3Y-DEPDC5 DDX3Y chrY 15030040 DEPDC5 chr22 32188017 Exonic hg19 NA BE938106 Out-of-frame Inter-chr q11.221 q12.2 115859 ChimerSeq ChiTaRs ChiTaRs SPRR1B-ARL13B SPRR1B chr1 153005335 ARL13B chr3 93722588 Exonic hg19 NA BE181426 Out-of-frame Inter-chr q21.3 q11.1 115860 ChimerSeq ChiTaRs ChiTaRs ADAMTS2-RPL11 ADAMTS2 chr5 178701875 RPL11 chr1 24018296 Exonic hg19 NA CV387556 Out-of-frame Inter-chr p36.11 Tumor suppressor gene 115861 ChimerSeq ChiTaRs ChiTaRs FBXO38-FBXO38 FBXO38 chr5 147809152 FBXO38 chr5 147763520 Exonic hg19 NA DA811966 Out-of-frame Intra-chr q32 q32 115862 ChimerSeq ChiTaRs ChiTaRs EFHC1-PTPN23 EFHC1 chr6 52318426 PTPN23 chr3 47449268 Exonic hg19 NA BG271696 Out-of-frame Inter-chr p12.2 p21.31 Tumor suppressor gene 115863 ChimerSeq ChiTaRs ChiTaRs NAMPT-UBE2H NAMPT chr7 105906205 UBE2H chr7 129554703 Exonic hg19 NA BF874906 Out-of-frame Intra-chr q22.3 q32.2 115864 ChimerSeq ChiTaRs ChiTaRs LOC285696-LOC285696 LOC285696 chr5 17214558 LOC285696 chr5 17215980 Exonic hg19 NA DW427826 Out-of-frame Intra-chr 115865 ChimerSeq ChiTaRs ChiTaRs XKR6-XKR6 XKR6 chr8 10967196 XKR6 chr8 10968855 Exonic hg19 NA CX165016 Out-of-frame Intra-chr p23.1 p23.1 115866 ChimerSeq ChiTaRs ChiTaRs INPP4B-WBSCR17 INPP4B chr4 143719135 WBSCR17 chr7 70897786 Exonic hg19 NA S60878 Out-of-frame Inter-chr q31.21 Tumor suppressor gene q11.22 115867 ChimerSeq ChiTaRs ChiTaRs PNMA2-KIAA0319L PNMA2 chr8 26363204 KIAA0319L chr1 35972340 Exonic hg19 NA AU125876 Out-of-frame Inter-chr p21.2 p34.3 115868 ChimerSeq ChiTaRs ChiTaRs FDPS-TGIF2 FDPS chr1 155290297 TGIF2 chr20 35215649 Exonic hg19 NA BF928396 Out-of-frame Inter-chr q22 q11.23 Transcription factor 115869 ChimerSeq ChiTaRs ChiTaRs SFXN3-RCHY1 SFXN3 chr10 102800998 RCHY1 chr4 76407301 Exonic hg19 NA CA425666 3'UTR-3'UTR Inter-chr q24.31 q21.1 Tumor suppressor gene 115870 ChimerSeq ChiTaRs ChiTaRs HLA-DRA-PEX5L HLA-DRA chr6 3689255 PEX5L chr3 179743943 Exonic hg19 NA AB209166 Out-of-frame Inter-chr q26.33 115871 ChimerSeq ChiTaRs ChiTaRs MARCKSL1-MARCKSL1 MARCKSL1 chr1 32800053 MARCKSL1 chr1 32800034 Exonic hg19 NA BF748436 Out-of-frame Intra-chr p35.1 p35.1 115872 ChimerSeq ChiTaRs ChiTaRs GCLC-PDSS1 GCLC chr6 53374912 PDSS1 chr10 27034195 Exonic hg19 NA DB542246 Out-of-frame Inter-chr p12.1 p12.1 115873 ChimerSeq ChiTaRs ChiTaRs CPSF3L-CSF1R CPSF3L chr1 1256455 CSF1R chr5 149473881 Exonic hg19 NA BC017216 Out-of-frame Inter-chr q32 Oncogene 115874 ChimerSeq ChiTaRs ChiTaRs SLC25A44-PRKACB SLC25A44 chr1 156169881 PRKACB chr1 84630378 Exonic hg19 NA DA223586 Out-of-frame Intra-chr q22 p31.1 115875 ChimerSeq ChiTaRs ChiTaRs ADAM12-ST6GALNAC3 ADAM12 chr10 127886721 ST6GALNAC3 chr1 76769836 Exonic hg19 NA BG003526 Out-of-frame Inter-chr q26.2 p31.1 115876 ChimerSeq ChiTaRs ChiTaRs DYRK3-DYRK3 DYRK3 chr1 206826389 DYRK3 chr1 206823873 Exonic hg19 NA CV414816 Out-of-frame Intra-chr q32.1 CMGC:DYRK q32.1 CMGC:DYRK 115877 ChimerSeq ChiTaRs ChiTaRs SVIL-PEAK1 SVIL chr10 29811430 PEAK1 chr15 77473883 Exonic hg19 NA BE933156 Out-of-frame Inter-chr p11.23 q24.3 115878 ChimerSeq ChiTaRs ChiTaRs AP1S2-LPCAT1 AP1S2 chrX 15845283 LPCAT1 chr5 1461785 Exonic hg19 NA BM693256 Out-of-frame Inter-chr p22.2 115879 ChimerSeq ChiTaRs ChiTaRs PLA2G2D-SKAP1 PLA2G2D chr1 20446019 SKAP1 chr17 46483648 Exonic hg19 NA AY358606 Out-of-frame Inter-chr p36.12 q21.32 115880 ChimerSeq ChiTaRs ChiTaRs GSTO1-PLIN2 GSTO1 chr10 106019431 PLIN2 chr9 19115888 Exonic hg19 NA BG314836 Out-of-frame Inter-chr q25.1 p22.1 115881 ChimerSeq ChiTaRs ChiTaRs COPA-LRRFIP1 COPA chr1 160309405 LRRFIP1 chr2 238672450 Exonic hg19 NA BQ317876 Out-of-frame Inter-chr q23.2 q37.3 115882 ChimerSeq ChiTaRs ChiTaRs LOC285696-PLEKHA5 LOC285696 chr5 17177648 PLEKHA5 chr12 19448658 Exonic hg19 NA AI222136 Out-of-frame Inter-chr p12.3 115883 ChimerSeq ChiTaRs ChiTaRs DHFR-SPPL3 DHFR chr5 79945919 SPPL3 chr12 121222150 Exonic hg19 NA BQ328186 Out-of-frame Inter-chr q14.1 q24.31 115884 ChimerSeq ChiTaRs ChiTaRs TMCC2-TMCC2 TMCC2 chr1 205241069 TMCC2 chr1 205238497 Exonic hg19 NA BC053876 Out-of-frame Intra-chr q32.1 q32.1 115885 ChimerSeq ChiTaRs ChiTaRs GNAI3-GNAI3 GNAI3 chr1 110135956 GNAI3 chr1 110135929 Exonic hg19 NA H87926 Out-of-frame Intra-chr p13.3 p13.3 115886 ChimerSeq ChiTaRs ChiTaRs NUP153-NUP153 NUP153 chr6 17665573 NUP153 chr6 17669728 Exonic hg19 NA AA281956 Out-of-frame Intra-chr p22.3 p22.3 115887 ChimerSeq ChiTaRs ChiTaRs ENPP2-ETNK1 ENPP2 chr8 120610015 ETNK1 chr12 22787799 Exonic hg19 NA BE061136 Out-of-frame Inter-chr q24.12 p12.1 115888 ChimerSeq ChiTaRs ChiTaRs MACF1-B4GALT2 MACF1 chr1 39710708 B4GALT2 chr1 44447038 Exonic hg19 NA M78136 Out-of-frame Intra-chr p34.3 p34.1 115889 ChimerSeq ChiTaRs ChiTaRs MIR29B2-RRBP1 MIR29B2 chr1 207990466 RRBP1 chr20 17594742 Exonic hg19 NA BG004426 Out-of-frame Inter-chr q32.2 p12.1 115890 ChimerSeq ChiTaRs ChiTaRs NR3C1-NR3C1 NR3C1 chr5 142659526 NR3C1 chr5 142659534 Exonic hg19 NA BU679196 Out-of-frame Intra-chr q31.3 Transcription factor q31.3 Transcription factor 115891 ChimerSeq ChiTaRs ChiTaRs INTS10-INTS10 INTS10 chr8 19703778 INTS10 chr8 19707845 Exonic hg19 NA DB329146 Out-of-frame Intra-chr p21.3 p21.3 115892 ChimerSeq ChiTaRs ChiTaRs ECE1-ECE1 ECE1 chr1 21545462 ECE1 chr1 21544280 Exonic hg19 NA AA864426 Out-of-frame Intra-chr p36.12 p36.12 115893 ChimerSeq ChiTaRs ChiTaRs IGJ-MCM7 IGJ chr4 71532245 MCM7 chr7 99696964 Exonic hg19 NA DA922596 Out-of-frame Inter-chr q22.1 115894 ChimerSeq ChiTaRs ChiTaRs ITGA10-MSL1 ITGA10 chr1 145543271 MSL1 chr17 38292018 Exonic hg19 NA BQ345926 Out-of-frame Inter-chr q21.1 Oncogene q21.1 115895 ChimerSeq ChiTaRs ChiTaRs WNT5A-WNT5A WNT5A chr3 55500310 WNT5A chr3 55500307 Exonic hg19 NA AA714996 Out-of-frame Intra-chr p14.3 Tumor suppressor gene p14.3 Tumor suppressor gene 115896 ChimerSeq ChiTaRs ChiTaRs ALK-RPA1 ALK chr2 29478981 RPA1 chr17 1779045 Exonic hg19 NA BF945806 Out-of-frame Inter-chr p23.1 TK:ALK Oncogene p13.3 Tumor suppressor gene 115897 ChimerSeq ChiTaRs ChiTaRs MOB2-MOB2 MOB2 chr11 1775108 MOB2 chr11 1774588 Exonic hg19 NA AW605506 Out-of-frame Intra-chr p15.5 p15.5 115898 ChimerSeq ChiTaRs ChiTaRs IBTK-IBTK IBTK chr6 82880526 IBTK chr6 82880509 Exonic hg19 NA BE617876 Out-of-frame Intra-chr 115899 ChimerSeq ChiTaRs ChiTaRs BTNL9-LSM14B BTNL9 chr5 180469231 LSM14B chr20 60709217 Exonic hg19 NA BF919146 Out-of-frame Inter-chr q35.3 q13.33 115900 ChimerSeq ChiTaRs ChiTaRs CA13-CA13 CA13 chr8 86276224 CA13 chr8 86275882 Exonic hg19 NA BE162396 Out-of-frame Intra-chr q21.2 q21.2 115901 ChimerSeq ChiTaRs ChiTaRs PRKAG2-PRKAG2 PRKAG2 chr7 151261400 PRKAG2 chr7 151269523 Exonic hg19 NA BP373596 Out-of-frame Intra-chr q36.1 q36.1 115902 ChimerSeq ChiTaRs ChiTaRs TXNIP-KARS TXNIP chr1 145442025 KARS chr16 75665733 Exonic hg19 NA BQ375676 Out-of-frame Inter-chr q21.1 Tumor suppressor gene q23.1 115903 ChimerSeq ChiTaRs ChiTaRs TMEM14A-TMEM14A TMEM14A chr6 52551245 TMEM14A chr6 52551208 Exonic hg19 NA AW969676 Out-of-frame Intra-chr p12.2 p12.2 115904 ChimerSeq ChiTaRs ChiTaRs BRD9-DGKD BRD9 chr5 863953 DGKD chr2 234373444 Exonic hg19 NA BM151326 Out-of-frame Inter-chr p15.33 115905 ChimerSeq ChiTaRs ChiTaRs SENP6-SENP6 SENP6 chr6 76415377 SENP6 chr6 76415647 Exonic hg19 NA BF679506 Out-of-frame Intra-chr q14.1 q14.1 115906 ChimerSeq ChiTaRs ChiTaRs COX15-TRAPPC4 COX15 chr10 101489341 TRAPPC4 chr11 118892467 Exonic hg19 NA BF886586 Out-of-frame Inter-chr q24.2 115907 ChimerSeq ChiTaRs ChiTaRs FBXL4-PROX1 FBXL4 chr6 99395806 PROX1 chr1 214169810 Exonic hg19 NA AK290176 Out-of-frame Inter-chr q16.2 q32.3 Tumor suppressor gene Transcription factor 115908 ChimerSeq ChiTaRs ChiTaRs CFB-PARN CFB chr6 3252074 PARN chr16 14563544 Exonic hg19 NA AF130116 Out-of-frame Inter-chr 115909 ChimerSeq ChiTaRs ChiTaRs ENTPD7-LPCAT1 ENTPD7 chr10 101468607 LPCAT1 chr5 1461544 Exonic hg19 NA AK123516 Out-of-frame Inter-chr q24.2 115910 ChimerSeq ChiTaRs ChiTaRs CLCN3-NFATC3 CLCN3 chr4 170644338 NFATC3 chr16 68155986 Exonic hg19 NA AI917646 3'UTR-CDS Inter-chr q33 q22.1 Transcription factor 115911 ChimerSeq ChiTaRs ChiTaRs LMBRD1-GPR157 LMBRD1 chr6 70481466 GPR157 chr1 9164578 Exonic hg19 NA BE171366 Out-of-frame Inter-chr q13 p36.22 115912 ChimerSeq ChiTaRs ChiTaRs LRCH4-TBC1D1 LRCH4 chr7 100178707 TBC1D1 chr4 38091674 Exonic hg19 NA BE709716 Out-of-frame Inter-chr q22.1 p14 115913 ChimerSeq ChiTaRs ChiTaRs H2AFY-ZFHX4 H2AFY chr5 134705748 ZFHX4 chr8 77764869 Exonic hg19 NA CB217196 Out-of-frame Inter-chr q31.1 q21.13 Transcription factor 115914 ChimerSeq ChiTaRs ChiTaRs EHMT2-MSL2 EHMT2 chr6 3183305 MSL2 chr3 135869329 Exonic hg19 NA AW361916 Out-of-frame Inter-chr q22.3 115915 ChimerSeq ChiTaRs ChiTaRs YTHDC1-RBM25 YTHDC1 chr4 45713 RBM25 chr14 73572681 Exonic hg19 NA CN350716 Out-of-frame Inter-chr q24.2 115916 ChimerSeq ChiTaRs ChiTaRs NUB1-SPDYA NUB1 chr7 151053000 SPDYA chr2 29066604 Exonic hg19 NA AA393076 Out-of-frame Inter-chr q36.1 p23.2 115917 ChimerSeq ChiTaRs ChiTaRs PPT2-TUBB4A PPT2 chr6 3397973 TUBB4A chr19 6495065 Exonic hg19 NA BF933096 Out-of-frame Inter-chr p13.3 115918 ChimerSeq ChiTaRs ChiTaRs BGN-PPP1R12B BGN chrX 152775004 PPP1R12B chr1 202469358 Exonic hg19 NA BQ183196 3'UTR-3'UTR Inter-chr q28 q32.1 115919 ChimerSeq ChiTaRs ChiTaRs CXCL14-CXCL14 CXCL14 chr5 134910340 CXCL14 chr5 134914159 Exonic hg19 NA DN989556 Out-of-frame Intra-chr q31.1 Tumor suppressor gene q31.1 Tumor suppressor gene 115920 ChimerSeq ChiTaRs ChiTaRs COL6A3-STK39 COL6A3 chr2 238266015 STK39 chr2 169068985 Exonic hg19 NA BQ330916 Out-of-frame Intra-chr q37.3 q24.3 115921 ChimerSeq ChiTaRs ChiTaRs SORBS2-SORBS2 SORBS2 chr4 186571028 SORBS2 chr4 186571288 Exonic hg19 NA CN412616 Out-of-frame Intra-chr q35.1 q35.1 115922 ChimerSeq ChiTaRs ChiTaRs ARID4B-ALB ARID4B chr1 235456218 ALB chr4 74270005 Exonic hg19 NA AU120466 Out-of-frame Inter-chr q42.3 q13.3 115923 ChimerSeq ChiTaRs ChiTaRs CACNA2D1-CACNA2D1 CACNA2D1 chr7 81898337 CACNA2D1 chr7 81898045 Exonic hg19 NA CV320186 Out-of-frame Intra-chr q21.11 q21.11 115924 ChimerSeq ChiTaRs ChiTaRs BASP1-BASP1 BASP1 chr5 17276760 BASP1 chr5 17276276 Exonic hg19 NA BM979146 Out-of-frame Intra-chr p15.1 Tumor suppressor gene p15.1 Tumor suppressor gene 115925 ChimerSeq ChiTaRs ChiTaRs RRP12-RRP12 RRP12 chr10 99134858 RRP12 chr10 99135108 Exonic hg19 NA BM904976 Out-of-frame Intra-chr q24.1 q24.1 115926 ChimerSeq ChiTaRs ChiTaRs VRK2-CREM VRK2 chr2 58283783 CREM chr10 35471088 Exonic hg19 NA AW853696 Out-of-frame Inter-chr p16.1 CK1:VRK p11.21 Tumor suppressor gene Transcription factor 115927 ChimerSeq ChiTaRs ChiTaRs PAIP2-CCR6 PAIP2 chr5 138700559 CCR6 chr6 167455570 Exonic hg19 NA W94706 Out-of-frame Inter-chr q31.2 Tumor suppressor gene q27 115928 ChimerSeq ChiTaRs ChiTaRs GULP1-GULP1 GULP1 chr2 189311511 GULP1 chr2 189311334 Exonic hg19 NA BF988386 Out-of-frame Intra-chr q32.1 q32.1 115929 ChimerSeq ChiTaRs ChiTaRs SOX7-RAB1B SOX7 chr8 10583003 RAB1B chr11 66043688 Exonic hg19 NA BF853306 Out-of-frame Inter-chr p23.1 Tumor suppressor gene Transcription factor q13.2 115930 ChimerSeq ChiTaRs ChiTaRs FHAD1-COL8A2 FHAD1 chr1 15656221 COL8A2 chr1 36561313 Exonic hg19 NA BU733266 Out-of-frame Intra-chr p36.21 p34.3 115931 ChimerSeq ChiTaRs ChiTaRs LPHN2-LPHN2 LPHN2 chr1 81977445 LPHN2 chr1 81977089 Exonic hg19 NA T53006 Out-of-frame Intra-chr 115932 ChimerSeq ChiTaRs ChiTaRs FBXO6-GPR108 FBXO6 chr1 11728478 GPR108 chr19 6730066 Exonic hg19 NA BQ181126 Out-of-frame Inter-chr p36.22 p13.3 115933 ChimerSeq ChiTaRs ChiTaRs RUVBL1-TRIM14 RUVBL1 chr3 127816319 TRIM14 chr9 100848209 Exonic hg19 NA CV343876 Out-of-frame Inter-chr q21.3 q22.33 115934 ChimerSeq ChiTaRs ChiTaRs MED12L-MTCH1 MED12L chr3 150977765 MTCH1 chr6 36938212 Exonic hg19 NA BE930046 Out-of-frame Inter-chr q25.1 p21.2 115935 ChimerSeq ChiTaRs ChiTaRs LAD1-PPP2R1B LAD1 chr1 201355621 PPP2R1B chr11 111611769 Exonic hg19 NA BE564406 Out-of-frame Inter-chr q32.1 q23.1 Tumor suppressor gene 115936 ChimerSeq ChiTaRs ChiTaRs UTRN-NFIA UTRN chr6 144766736 NFIA chr1 61926695 Exonic hg19 NA AU142016 Out-of-frame Inter-chr q24.2 p31.3 Transcription factor 115937 ChimerSeq ChiTaRs ChiTaRs PLXNB1-PLXNB1 PLXNB1 chr3 48452401 PLXNB1 chr3 48465850 Exonic hg19 NA AA348716 Out-of-frame Intra-chr p21.31 p21.31 115938 ChimerSeq ChiTaRs ChiTaRs LOC100506548-MAPK8IP2 LOC100506548 chr5 40825811 MAPK8IP2 chr22 51049408 Exonic hg19 NA BF091616 Out-of-frame Inter-chr q13.33 115939 ChimerSeq ChiTaRs ChiTaRs DYSF-DYSF DYSF chr2 71712901 DYSF chr2 71717335 Exonic hg19 NA AI033526 Out-of-frame Intra-chr p13.2 p13.2 115940 ChimerSeq ChiTaRs ChiTaRs WDR60-RASAL2 WDR60 chr7 158734144 RASAL2 chr1 178414501 Exonic hg19 NA BF767256 Out-of-frame Inter-chr q36.3 q25.2 Tumor suppressor gene 115941 ChimerSeq ChiTaRs ChiTaRs B4GALT1-B4GALT1 B4GALT1 chr9 33111254 B4GALT1 chr9 33112106 Exonic hg19 NA BE466056 Out-of-frame Intra-chr p21.1 p21.1 115942 ChimerSeq ChiTaRs ChiTaRs ELF2-PSMD8 ELF2 chr4 140036280 PSMD8 chr19 38865435 Exonic hg19 NA BC071826 Out-of-frame Inter-chr q31.1 Transcription factor q13.2 115943 ChimerSeq ChiTaRs ChiTaRs RPS4X-ALG10B RPS4X chrX 71492507 ALG10B chr12 38716185 Exonic hg19 NA AI382716 Out-of-frame Inter-chr q13.1 q12 115944 ChimerSeq ChiTaRs ChiTaRs PDZRN3-PDZRN3 PDZRN3 chr3 73483145 PDZRN3 chr3 73434820 Exonic hg19 NA W28326 Out-of-frame Intra-chr p13 p13 115945 ChimerSeq ChiTaRs ChiTaRs KAZALD1-KAZALD1 KAZALD1 chr10 102827121 KAZALD1 chr10 102822528 Exonic hg19 NA BX098846 Out-of-frame Intra-chr q24.31 q24.31 115946 ChimerSeq ChiTaRs ChiTaRs CYHR1-CYHR1 CYHR1 chr8 145680154 CYHR1 chr8 145687116 Exonic hg19 NA BE697386 Out-of-frame Intra-chr q24.3 q24.3 115947 ChimerSeq ChiTaRs ChiTaRs IDO1-NUFIP2 IDO1 chr8 39777673 NUFIP2 chr17 27582971 Exonic hg19 NA BE172266 Out-of-frame Inter-chr p11.21 q11.2 115948 ChimerSeq ChiTaRs ChiTaRs MRPS9-TTC40 MRPS9 chr2 105716407 TTC40 chr10 134652612 Exonic hg19 NA AW027496 Out-of-frame Inter-chr q12.1 115949 ChimerSeq ChiTaRs ChiTaRs POLH-POLH POLH chr6 43583394 POLH chr6 43586168 Exonic hg19 NA AA809386 Out-of-frame Intra-chr p21.1 p21.1 115950 ChimerSeq ChiTaRs ChiTaRs PFN2-PFN2 PFN2 chr3 149683827 PFN2 chr3 149683805 Exonic hg19 NA D44926 Out-of-frame Intra-chr q25.1 q25.1 115951 ChimerSeq ChiTaRs ChiTaRs CYHR1-ACTN1 CYHR1 chr8 145737426 ACTN1 chr14 69356971 Exonic hg19 NA BE838956 Out-of-frame Inter-chr q24.3 q24.1 115952 ChimerSeq ChiTaRs ChiTaRs AFAP1-SIN3A AFAP1 chr4 7791786 SIN3A chr15 75668057 Exonic hg19 NA BF764786 Out-of-frame Inter-chr p16.1 q24.2 115953 ChimerSeq ChiTaRs ChiTaRs XKR4-DONSON XKR4 chr8 56062021 DONSON chr21 35284555 Exonic hg19 NA DA104986 Out-of-frame Inter-chr q12.1 q22.11 115954 ChimerSeq ChiTaRs ChiTaRs DYNC1I2-HNRNPA2B1 DYNC1I2 chr2 172571926 HNRNPA2B1 chr7 26233215 Exonic hg19 NA BE841726 Out-of-frame Inter-chr q31.1 p15.2 115955 ChimerSeq ChiTaRs ChiTaRs PARD3-PARD3 PARD3 chr10 34449253 PARD3 chr10 34444252 Exonic hg19 NA AW936456 Out-of-frame Intra-chr p11.21 p11.21 115956 ChimerSeq ChiTaRs ChiTaRs LAMB3-LAMB3 LAMB3 chr1 209788608 LAMB3 chr1 209795948 Exonic hg19 NA BI017906 Out-of-frame Intra-chr q32.2 q32.2 115957 ChimerSeq ChiTaRs ChiTaRs AP2M1-LOC440434 AP2M1 chr3 183898731 LOC440434 chr17 36412942 Exonic hg19 NA CF132736 Out-of-frame Inter-chr q27.1 115958 ChimerSeq ChiTaRs ChiTaRs ZNF518B-ZNF518B ZNF518B chr4 10442678 ZNF518B chr4 10442334 Exonic hg19 NA AA211236 Out-of-frame Intra-chr p16.1 Transcription factor p16.1 Transcription factor 115959 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-INS-IGF2 INS-IGF2 chr11 2150920 INS-IGF2 chr11 2150589 Exonic hg19 NA AW881446 Out-of-frame Intra-chr p15.5 p15.5 Oncogene 115960 ChimerSeq ChiTaRs ChiTaRs FLNA-CUBN FLNA chrX 153585863 CUBN chr10 16955945 Exonic hg19 NA BI039276 Out-of-frame Inter-chr q28 Tumor suppressor gene p13 115961 ChimerSeq ChiTaRs ChiTaRs OTX1-OTX1 OTX1 chr2 63283469 OTX1 chr2 63283230 Exonic hg19 NA BQ304356 Out-of-frame Intra-chr p15 Transcription factor p15 Transcription factor 115962 ChimerSeq ChiTaRs ChiTaRs PRKAA2-PRKAA2 PRKAA2 chr1 57171911 PRKAA2 chr1 57171934 Exonic hg19 NA AI732856 Out-of-frame Intra-chr p32.2 Tumor suppressor gene p32.2 Tumor suppressor gene 115963 ChimerSeq ChiTaRs ChiTaRs ATPIF1-STIL ATPIF1 chr1 28564546 STIL chr1 47770177 Exonic hg19 NA AW582126 Out-of-frame Intra-chr p35.3 p33 115964 ChimerSeq ChiTaRs ChiTaRs PXK-PXK PXK chr3 58406620 PXK chr3 58402609 Exonic hg19 NA BG741316 Out-of-frame Intra-chr p14.3 p14.3 115965 ChimerSeq ChiTaRs ChiTaRs PARVA-BACE2 PARVA chr11 12510710 BACE2 chr21 42609559 Exonic hg19 NA AK027376 Out-of-frame Inter-chr p15.3 q22.2 115966 ChimerSeq ChiTaRs ChiTaRs VBP1-VBP1 VBP1 chrX 154467271 VBP1 chrX 154467246 Exonic hg19 NA AL079966 Out-of-frame Intra-chr q28 q28 115967 ChimerSeq ChiTaRs ChiTaRs WDR43-MBP WDR43 chr2 29150925 MBP chr18 74701910 Exonic hg19 NA DA181566 Out-of-frame Inter-chr p23.2 q23 115968 ChimerSeq ChiTaRs ChiTaRs CXXC5-SMYD3 CXXC5 chr5 139062680 SMYD3 chr1 246657067 Exonic hg19 NA AI351776 3'UTR-CDS Inter-chr q31.2 Tumor suppressor gene Transcription factor q44 Transcription factor 115969 ChimerSeq ChiTaRs ChiTaRs HMGB2-MFAP1 HMGB2 chr4 174253383 MFAP1 chr15 44105288 Exonic hg19 NA BF095536 Out-of-frame Inter-chr q34.1 q15.3 115970 ChimerSeq ChiTaRs ChiTaRs PDGFRA-EFNB3 PDGFRA chr4 55102615 EFNB3 chr17 7613927 Exonic hg19 NA BE834326 Out-of-frame Inter-chr q12 Oncogene p13.1 115971 ChimerSeq ChiTaRs ChiTaRs LRRC6-ZNF10 LRRC6 chr8 133623610 ZNF10 chr12 133707506 Exonic hg19 NA CA503006 Out-of-frame Inter-chr q24.22 q24.33 Transcription factor 115972 ChimerSeq ChiTaRs ChiTaRs GABRG2-GABRG2 GABRG2 chr5 161580622 GABRG2 chr5 161580602 Exonic hg19 NA BQ716996 Out-of-frame Intra-chr q34 q34 115973 ChimerSeq ChiTaRs ChiTaRs IL13RA1-NUCKS1 IL13RA1 chrX 117926988 NUCKS1 chr1 205687372 Exonic hg19 NA AW578886 Out-of-frame Inter-chr q24 q32.1 115974 ChimerSeq ChiTaRs ChiTaRs CDK16-PHF20 CDK16 chrX 47083234 PHF20 chr20 34380461 Exonic hg19 NA BI050456 Out-of-frame Inter-chr p11.3 q11.22 Transcription factor 115975 ChimerSeq ChiTaRs ChiTaRs PRPH2-PRPH2 PRPH2 chr6 42665298 PRPH2 chr6 42664593 Exonic hg19 NA W28996 Out-of-frame Intra-chr p21.1 p21.1 115976 ChimerSeq ChiTaRs ChiTaRs PLEKHA6-CNOT8 PLEKHA6 chr1 204210919 CNOT8 chr5 154240133 Exonic hg19 NA BG979616 Out-of-frame Inter-chr q32.1 q33.2 115977 ChimerSeq ChiTaRs ChiTaRs STX3-MEPCE STX3 chr11 59568967 MEPCE chr7 100026880 Exonic hg19 NA BE933166 Out-of-frame Inter-chr q12.1 q22.1 115978 ChimerSeq ChiTaRs ChiTaRs DYSF-DYSF DYSF chr2 71712901 DYSF chr2 71717336 Exonic hg19 NA AA700756 Out-of-frame Intra-chr p13.2 p13.2 115979 ChimerSeq ChiTaRs ChiTaRs FAM208B-FAM208B FAM208B chr10 5751733 FAM208B chr10 5747839 Exonic hg19 NA AK026036 Out-of-frame Intra-chr p15.1 p15.1 115980 ChimerSeq ChiTaRs ChiTaRs PARM1-ITGAV PARM1 chr4 75972672 ITGAV chr2 187500817 Exonic hg19 NA BF063946 Out-of-frame Inter-chr q13.3 q32.1 Tumor suppressor gene 115981 ChimerSeq ChiTaRs ChiTaRs VANGL2-VANGL2 VANGL2 chr1 160396434 VANGL2 chr1 160396489 Exonic hg19 NA BE177496 Out-of-frame Intra-chr q23.2 q23.2 115982 ChimerSeq ChiTaRs ChiTaRs HEYL-MORC4 HEYL chr1 40097252 MORC4 chrX 106185927 Exonic hg19 NA BI058396 Out-of-frame Inter-chr p34.2 Transcription factor q22.3 115983 ChimerSeq ChiTaRs ChiTaRs ARL6IP5-EBF3 ARL6IP5 chr3 69151062 EBF3 chr10 131714413 Exonic hg19 NA BF827316 Out-of-frame Inter-chr p14.1 Tumor suppressor gene q26.3 Tumor suppressor gene Transcription factor 115984 ChimerSeq ChiTaRs ChiTaRs REST-UFD1L REST chr4 57796393 UFD1L chr22 19450519 Exonic hg19 NA BE813696 Out-of-frame Inter-chr q12 Transcription factor 115985 ChimerSeq ChiTaRs ChiTaRs KIAA1407-KIAA1407 KIAA1407 chr3 113753846 KIAA1407 chr3 113755513 Exonic hg19 NA BU854646 Out-of-frame Intra-chr 115986 ChimerSeq ChiTaRs ChiTaRs ADAMTS4-PDE6D ADAMTS4 chr1 161168723 PDE6D chr2 232597175 Exonic hg19 NA AV724446 Out-of-frame Inter-chr q23.3 q37.1 115987 ChimerSeq ChiTaRs ChiTaRs ADAM23-ADAM23 ADAM23 chr2 207437911 ADAM23 chr2 207454197 Exonic hg19 NA AW898896 Out-of-frame Intra-chr q33.3 q33.3 115988 ChimerSeq ChiTaRs ChiTaRs SLC1A3-SLC1A3 SLC1A3 chr5 36629802 SLC1A3 chr5 36630343 Exonic hg19 NA AI638026 Out-of-frame Intra-chr p13.2 p13.2 115989 ChimerSeq ChiTaRs ChiTaRs YWHAQ-TDG YWHAQ chr2 9738372 TDG chr12 104359664 Exonic hg19 NA U51166 Out-of-frame Inter-chr p25.1 q23.3 115990 ChimerSeq ChiTaRs ChiTaRs PTPN4-CD68 PTPN4 chr2 120675062 CD68 chr17 7484896 Exonic hg19 NA CA425896 Out-of-frame Inter-chr q14.2 p13.1 115991 ChimerSeq ChiTaRs ChiTaRs SPTBN1-SPTBN1 SPTBN1 chr2 54856340 SPTBN1 chr2 54871701 Exonic hg19 NA BF510936 Out-of-frame Intra-chr p16.2 Tumor suppressor gene p16.2 Tumor suppressor gene 115992 ChimerSeq ChiTaRs ChiTaRs RBM47-RBM47 RBM47 chr4 40543505 RBM47 chr4 40544427 Exonic hg19 NA BF741816 Out-of-frame Intra-chr p14 p14 115993 ChimerSeq ChiTaRs ChiTaRs PARP14-PARP14 PARP14 chr3 122440566 PARP14 chr3 122441378 Exonic hg19 NA BF907666 Out-of-frame Intra-chr q21.1 q21.1 115994 ChimerSeq ChiTaRs ChiTaRs COPS5-COPS5 COPS5 chr8 67958068 COPS5 chr8 67958101 Exonic hg19 NA CA419886 Out-of-frame Intra-chr q13.1 q13.1 115995 ChimerSeq ChiTaRs ChiTaRs MRPL23-UBB MRPL23 chr11 1972186 UBB chr17 16284717 Exonic hg19 NA BU596366 Out-of-frame Inter-chr p15.5 p11.2 115996 ChimerSeq ChiTaRs ChiTaRs PARD3-COL6A3 PARD3 chr10 34896622 COL6A3 chr2 238233127 Exonic hg19 NA BE840726 Out-of-frame Inter-chr p11.21 q37.3 115997 ChimerSeq ChiTaRs ChiTaRs ATP13A3-ATP13A3 ATP13A3 chr3 194124296 ATP13A3 chr3 194123568 Exonic hg19 NA BU156006 Out-of-frame Intra-chr q29 q29 115998 ChimerSeq ChiTaRs ChiTaRs SH3KBP1-SH3KBP1 SH3KBP1 chrX 19713769 SH3KBP1 chrX 19713737 Exonic hg19 NA BF810476 Out-of-frame Intra-chr p22.12 p22.12 115999 ChimerSeq ChiTaRs ChiTaRs KAT6A-CREBBP KAT6A chr8 41792753 CREBBP chr16 3926725 Exonic hg19 NA AJ315154 Out-of-frame Inter-chr p11.21 Oncogene p13.3 Oncogene Tumor suppressor gene KB Pub Seq+ 116000 ChimerSeq ChiTaRs ChiTaRs IL12RB2-ANKRD11 IL12RB2 chr1 67804443 ANKRD11 chr16 89368926 Exonic hg19 NA AI831536 Out-of-frame Inter-chr p31.3 q24.3 116001 ChimerSeq ChiTaRs ChiTaRs STK39-PCNX STK39 chr2 168810759 PCNX chr14 71445070 Exonic hg19 NA AI968156 Out-of-frame Inter-chr q24.3 116002 ChimerSeq ChiTaRs ChiTaRs TRAK1-PPARGC1B TRAK1 chr3 42256906 PPARGC1B chr5 149209185 Exonic hg19 NA BF361916 Out-of-frame Inter-chr p22.1 q32 116003 ChimerSeq ChiTaRs ChiTaRs GRK5-PTPN3 GRK5 chr10 121187792 PTPN3 chr9 112210802 Exonic hg19 NA BG004546 Out-of-frame Inter-chr q26.11 q31.3 116004 ChimerSeq ChiTaRs ChiTaRs KIF13A-KIF13A KIF13A chr6 17834305 KIF13A chr6 17826109 Exonic hg19 NA BF357666 Out-of-frame Intra-chr p22.3 p22.3 116005 ChimerSeq ChiTaRs ChiTaRs SLC12A2-AKIRIN1 SLC12A2 chr5 127524426 AKIRIN1 chr1 39470509 Exonic hg19 NA AI686136 Out-of-frame Inter-chr q23.3 p34.3 116006 ChimerSeq ChiTaRs ChiTaRs HLA-B-CAMK4 HLA-B chr6 2655538 CAMK4 chr5 110820275 Exonic hg19 NA DB344026 Out-of-frame Inter-chr q22.1 116007 ChimerSeq ChiTaRs ChiTaRs LCOR-FAM111A LCOR chr10 98675674 FAM111A chr11 58913003 Exonic hg19 NA AW851196 Out-of-frame Inter-chr q24.1 Transcription factor q12.1 116008 ChimerSeq ChiTaRs ChiTaRs RCC1-RCC1 RCC1 chr1 28864636 RCC1 chr1 28863343 Exonic hg19 NA AW579236 Out-of-frame Intra-chr p35.3 p35.3 116009 ChimerSeq ChiTaRs ChiTaRs PAIP2-PAIP2 PAIP2 chr5 138705190 PAIP2 chr5 138704944 Exonic hg19 NA AA828706 Out-of-frame Intra-chr q31.2 Tumor suppressor gene q31.2 Tumor suppressor gene 116010 ChimerSeq ChiTaRs ChiTaRs TAF5-TAF5 TAF5 chr10 105139473 TAF5 chr10 105128268 Exonic hg19 NA BQ220956 Out-of-frame Intra-chr q24.33 q24.33 116011 ChimerSeq ChiTaRs ChiTaRs BICC1-STARD13 BICC1 chr10 60563936 STARD13 chr13 33948940 Exonic hg19 NA BE143606 Out-of-frame Inter-chr q21.1 q13.1 Tumor suppressor gene 116012 ChimerSeq ChiTaRs ChiTaRs UPP1-UPP1 UPP1 chr7 48134420 UPP1 chr7 48134402 Exonic hg19 NA BG012356 Out-of-frame Intra-chr p12.3 p12.3 116013 ChimerSeq ChiTaRs ChiTaRs TCTA-TCTA TCTA chr3 49453496 TCTA chr3 49453527 Exonic hg19 NA BE693236 Out-of-frame Intra-chr p21.31 p21.31 116014 ChimerSeq ChiTaRs ChiTaRs PRDM2-TFG PRDM2 chr1 14126665 TFG chr3 100467456 Exonic hg19 NA BE766416 Out-of-frame Inter-chr p36.21 Tumor suppressor gene Transcription factor q12.2 116015 ChimerSeq ChiTaRs ChiTaRs SMC6-PTPRA SMC6 chr2 17981509 PTPRA chr20 2903852 Exonic hg19 NA DA756796 5'UTR-5'UTR Inter-chr p24.2 p13 116016 ChimerSeq ChiTaRs ChiTaRs TET3-GRK4 TET3 chr2 74308381 GRK4 chr4 3039863 Exonic hg19 NA BF355916 Out-of-frame Inter-chr p13.1 Transcription factor p16.3 116017 ChimerSeq ChiTaRs ChiTaRs PRDX3-CCDC57 PRDX3 chr10 120927820 CCDC57 chr17 80082299 Exonic hg19 NA AW861786 Out-of-frame Inter-chr q26.11 q25.3 116018 ChimerSeq ChiTaRs ChiTaRs PDIA6-BANP PDIA6 chr2 10932020 BANP chr16 87985724 Exonic hg19 NA BM852926 Out-of-frame Inter-chr p25.1 q24.2 Tumor suppressor gene 116019 ChimerSeq ChiTaRs ChiTaRs OTUD4-OTUD4 OTUD4 chr4 146095052 OTUD4 chr4 146095317 Exonic hg19 NA DW427746 Out-of-frame Intra-chr q31.21 q31.21 116020 ChimerSeq ChiTaRs ChiTaRs ANTXR2-ANTXR2 ANTXR2 chr4 80956646 ANTXR2 chr4 80956670 Exonic hg19 NA AI000346 Out-of-frame Intra-chr q21.21 q21.21 116021 ChimerSeq ChiTaRs ChiTaRs SDK1-SDK1 SDK1 chr7 4305619 SDK1 chr7 4305794 Exonic hg19 NA AL042166 Out-of-frame Intra-chr p22.2 p22.2 116022 ChimerSeq ChiTaRs ChiTaRs EIF3B-EIF3B EIF3B chr7 2419055 EIF3B chr7 2419064 Exonic hg19 NA BF813436 Out-of-frame Intra-chr p22.3 p22.3 116023 ChimerSeq ChiTaRs ChiTaRs DEGS1-DEGS1 DEGS1 chr1 224377748 DEGS1 chr1 224377728 Exonic hg19 NA AL079576 Out-of-frame Intra-chr q42.11 q42.11 116024 ChimerSeq ChiTaRs ChiTaRs CACNA2D3-CACNA2D3 CACNA2D3 chr3 54413107 CACNA2D3 chr3 54412930 Exonic hg19 NA AL120186 Out-of-frame Intra-chr p21.1 Tumor suppressor gene p21.1 Tumor suppressor gene 116025 ChimerSeq ChiTaRs ChiTaRs VSNL1-BTBD9 VSNL1 chr2 17836867 BTBD9 chr6 38141711 Exonic hg19 NA DB301956 Out-of-frame Inter-chr p24.2 Tumor suppressor gene p21.2 116026 ChimerSeq ChiTaRs ChiTaRs ACP2-KIRREL3 ACP2 chr11 47270356 KIRREL3 chr11 126792984 Exonic hg19 NA AK097626 Out-of-frame Intra-chr p11.2 q24.2 116027 ChimerSeq ChiTaRs ChiTaRs GABRP-TCF25 GABRP chr5 170240519 TCF25 chr16 89965214 Exonic hg19 NA BE720256 Out-of-frame Inter-chr q35.1 q24.3 116028 ChimerSeq ChiTaRs ChiTaRs CAST-CAST CAST chr5 96066564 CAST chr5 96078357 Exonic hg19 NA CB306886 CDS-5'UTR Intra-chr q15 q15 116029 ChimerSeq ChiTaRs ChiTaRs EIF4G1-HELLS EIF4G1 chr3 184052470 HELLS chr10 96326010 Exonic hg19 NA BE077006 Out-of-frame Inter-chr q27.1 q23.33 116030 ChimerSeq ChiTaRs ChiTaRs MAN1C1-THTPA MAN1C1 chr1 26034445 THTPA chr14 24026315 Exonic hg19 NA BI036406 Out-of-frame Inter-chr p36.11 q11.2 116031 ChimerSeq ChiTaRs ChiTaRs CAPN2-LAPTM4A CAPN2 chr1 223940600 LAPTM4A chr2 20240665 Exonic hg19 NA BQ308066 Out-of-frame Inter-chr q41 p24.1 116032 ChimerSeq ChiTaRs ChiTaRs CCR6-GABRR2 CCR6 chr6 167455896 GABRR2 chr6 89985350 Exonic hg19 NA AA016196 Out-of-frame Intra-chr q27 q15 116033 ChimerSeq ChiTaRs ChiTaRs ATP2B4-ATP2B4 ATP2B4 chr1 203712458 ATP2B4 chr1 203712053 Exonic hg19 NA BU590066 Out-of-frame Intra-chr q32.1 q32.1 116034 ChimerSeq ChiTaRs ChiTaRs LARP7-LARP7 LARP7 chr4 113568526 LARP7 chr4 113568509 Exonic hg19 NA AI565516 Out-of-frame Intra-chr q25 q25 116035 ChimerSeq ChiTaRs ChiTaRs LAMC1-LAMC1 LAMC1 chr1 183048250 LAMC1 chr1 183003441 Exonic hg19 NA AW856576 Out-of-frame Intra-chr q25.3 q25.3 116036 ChimerSeq ChiTaRs ChiTaRs WDR33-WDR33 WDR33 chr2 128491745 WDR33 chr2 128491352 Exonic hg19 NA AA834856 Out-of-frame Intra-chr q14.3 q14.3 116037 ChimerSeq ChiTaRs ChiTaRs LPHN3-SLC26A7 LPHN3 chr4 62349923 SLC26A7 chr8 92408531 Exonic hg19 NA BE172036 Out-of-frame Inter-chr q21.3 116038 ChimerSeq ChiTaRs ChiTaRs DNAJC1-MYB DNAJC1 chr10 22201941 MYB chr6 135540168 Exonic hg19 NA AA807457 Out-of-frame Inter-chr p12.31 q23.3 Oncogene Transcription factor 116039 ChimerSeq ChiTaRs ChiTaRs DDIT4-CSNK1D DDIT4 chr10 74035603 CSNK1D chr17 80209314 Exonic hg19 NA BE774996 Out-of-frame Inter-chr q22.1 q25.3 116040 ChimerSeq ChiTaRs ChiTaRs CD99L2-MYH7 CD99L2 chrX 149935907 MYH7 chr14 23894068 Exonic hg19 NA BF826346 Out-of-frame Inter-chr q28 q11.2 116041 ChimerSeq ChiTaRs ChiTaRs PALMD-PALMD PALMD chr1 100154961 PALMD chr1 100155376 Exonic hg19 NA Z19266 Out-of-frame Intra-chr p21.2 p21.2 116042 ChimerSeq ChiTaRs ChiTaRs BIRC6-SCFD1 BIRC6 chr2 32733897 SCFD1 chr14 31117105 Exonic hg19 NA BY795626 Out-of-frame Inter-chr p22.3 q12 116043 ChimerSeq ChiTaRs ChiTaRs WDR43-LOC100131564 WDR43 chr2 29137518 LOC100131564 chr1 93800785 Exonic hg19 NA W04436 Out-of-frame Inter-chr p23.2 116044 ChimerSeq ChiTaRs ChiTaRs ARHGAP21-CALN1 ARHGAP21 chr10 24955672 CALN1 chr7 71511015 Exonic hg19 NA BF930876 Out-of-frame Inter-chr p12.1 q11.22 116045 ChimerSeq ChiTaRs ChiTaRs GDI2-GDI2 GDI2 chr10 5808068 GDI2 chr10 5807835 Exonic hg19 NA AA636126 Out-of-frame Intra-chr p15.1 p15.1 116046 ChimerSeq ChiTaRs ChiTaRs CSDE1-CLASP1 CSDE1 chr1 115273251 CLASP1 chr2 122357878 Exonic hg19 NA AW995806 Out-of-frame Inter-chr p13.2 q14.3 116047 ChimerSeq ChiTaRs ChiTaRs LOC401106-LOC401106 LOC401106 chr3 194215088 LOC401106 chr3 194214790 Exonic hg19 NA AW772744 Out-of-frame Intra-chr 116048 ChimerSeq ChiTaRs ChiTaRs CC2D1B-ZC3H8 CC2D1B chr1 52816466 ZC3H8 chr2 112996777 Exonic hg19 NA AW204034 Out-of-frame Inter-chr p32.3 q14.1 Transcription factor 116049 ChimerSeq ChiTaRs ChiTaRs GALNT2-BRD9 GALNT2 chr1 230258423 BRD9 chr5 882190 Exonic hg19 NA BG985354 Out-of-frame Inter-chr q42.13 p15.33 116050 ChimerSeq ChiTaRs ChiTaRs PRRC2C-MTHFD1 PRRC2C chr1 171562378 MTHFD1 chr14 64915129 Exonic hg19 NA BG992574 Out-of-frame Inter-chr q24.3 q23.3 116051 ChimerSeq ChiTaRs ChiTaRs SEC31A-ARFGAP1 SEC31A chr4 83741680 ARFGAP1 chr20 61919448 Exonic hg19 NA BP418474 Out-of-frame Inter-chr q21.22 q13.33 116052 ChimerSeq ChiTaRs ChiTaRs LRRC4C-RPS8 LRRC4C chr11 41081143 RPS8 chr1 45243417 Exonic hg19 NA BF920614 Out-of-frame Inter-chr p12 p34.1 116053 ChimerSeq ChiTaRs ChiTaRs FHL1-COX6C FHL1 chrX 135293141 COX6C chr8 100899721 Exonic hg19 NA BF827394 Out-of-frame Inter-chr q26.3 Tumor suppressor gene q22.2 116054 ChimerSeq ChiTaRs ChiTaRs BOP1-BOP1 BOP1 chr8 145509429 BOP1 chr8 145509024 Exonic hg19 NA BF915844 Out-of-frame Intra-chr q24.3 q24.3 116055 ChimerSeq ChiTaRs ChiTaRs AKAP9-TRPS1 AKAP9 chr7 91670151 TRPS1 chr8 116599712 Exonic hg19 NA AU117784 Out-of-frame Inter-chr q21.2 Oncogene q23.3 Transcription factor 116056 ChimerSeq ChiTaRs ChiTaRs CTNND1-PLSCR1 CTNND1 chr11 57531729 PLSCR1 chr3 146256669 Exonic hg19 NA BG956564 Out-of-frame Inter-chr q12.1 Tumor suppressor gene q24 Transcription factor 116057 ChimerSeq ChiTaRs ChiTaRs CDCA7-CDCA7 CDCA7 chr2 174223468 CDCA7 chr2 174223440 Exonic hg19 NA BF795374 Out-of-frame Intra-chr q31.1 q31.1 116058 ChimerSeq ChiTaRs ChiTaRs TF-NEAT1 TF chr3 133462945 NEAT1 chr11 65191227 Exonic hg19 NA BF948784 Out-of-frame Inter-chr q22.1 q13.1 116059 ChimerSeq ChiTaRs ChiTaRs GRIPAP1-GRIPAP1 GRIPAP1 chrX 48850371 GRIPAP1 chrX 48854083 Exonic hg19 NA BF882674 Out-of-frame Intra-chr p11.23 p11.23 116060 ChimerSeq ChiTaRs ChiTaRs DDR1-PTCD1 DDR1 chr6 2152811 PTCD1 chr7 99022422 Exonic hg19 NA BF769784 Out-of-frame Inter-chr TK:DDR q22.1 116061 ChimerSeq ChiTaRs ChiTaRs MLLT10-CACNA2D3 MLLT10 chr10 21846111 CACNA2D3 chr3 54660646 Exonic hg19 NA BU674264 Out-of-frame Inter-chr p12.31 Oncogene p21.1 Tumor suppressor gene 116062 ChimerSeq ChiTaRs ChiTaRs LPP-CD58 LPP chr3 188527132 CD58 chr1 117057159 Exonic hg19 NA AK026834 Out-of-frame Inter-chr q27.3 Oncogene p13.1 116063 ChimerSeq ChiTaRs ChiTaRs FAM26F-FAM50A FAM26F chr6 116784634 FAM50A chrX 153672656 Exonic hg19 NA BF882554 Out-of-frame Inter-chr q22.1 q28 116064 ChimerSeq ChiTaRs ChiTaRs HLA-DRA-HLA-DRA HLA-DRA chr6 3883229 HLA-DRA chr6 3883007 Exonic hg19 NA AW190214 Out-of-frame Intra-chr 116065 ChimerSeq ChiTaRs ChiTaRs ZNF804B-PLG ZNF804B chr7 88507168 PLG chr6 161152048 Exonic hg19 NA BI001044 Out-of-frame Inter-chr q21.13 Transcription factor q26 116066 ChimerSeq ChiTaRs ChiTaRs MGAT4B-MGAT4B MGAT4B chr5 179228410 MGAT4B chr5 179225533 Exonic hg19 NA AW793754 Out-of-frame Intra-chr 116067 ChimerSeq ChiTaRs ChiTaRs HSPA1B-HSPA1B HSPA1B chr6 3091346 HSPA1B chr6 3083323 Exonic hg19 NA BF798994 Out-of-frame Intra-chr 116068 ChimerSeq ChiTaRs ChiTaRs LMNB1-CALD1 LMNB1 chr5 126172706 CALD1 chr7 134467906 Exonic hg19 NA AI983834 Out-of-frame Inter-chr q23.2 q33 116069 ChimerSeq ChiTaRs ChiTaRs NFE2L2-NACA NFE2L2 chr2 178095949 NACA chr12 57114058 Exonic hg19 NA AJ711284 Out-of-frame Inter-chr q31.2 Oncogene Transcription factor q13.3 116070 ChimerSeq ChiTaRs ChiTaRs SLC35B2-SLC35B2 SLC35B2 chr6 44222371 SLC35B2 chr6 44223144 Exonic hg19 NA BG706544 Out-of-frame Intra-chr p21.1 p21.1 116071 ChimerSeq ChiTaRs ChiTaRs SLC25A28-BRWD1 SLC25A28 chr10 101372417 BRWD1 chr21 40678824 Exonic hg19 NA BG984254 Out-of-frame Inter-chr q24.2 q22.2 116072 ChimerSeq ChiTaRs ChiTaRs HLA-C-ZNF664 HLA-C chr6 2618687 ZNF664 chr12 124499711 Exonic hg19 NA BP388374 Out-of-frame Inter-chr q24.31 116073 ChimerSeq ChiTaRs ChiTaRs STK32B-PLEKHM3 STK32B chr4 5410227 PLEKHM3 chr2 208866280 Exonic hg19 NA BF928354 Out-of-frame Inter-chr p16.2 q33.3 116074 ChimerSeq ChiTaRs ChiTaRs CALD1-BRWD1 CALD1 chr7 134642990 BRWD1 chr21 40664869 Exonic hg19 NA BG980424 Out-of-frame Inter-chr q33 q22.2 116075 ChimerSeq ChiTaRs ChiTaRs STS-SEPW1 STS chrX 7176214 SEPW1 chr19 48284136 Exonic hg19 NA BF956604 Out-of-frame Inter-chr p22.31 116076 ChimerSeq ChiTaRs ChiTaRs ABCB8-ABCB8 ABCB8 chr7 150742435 ABCB8 chr7 150730827 Exonic hg19 NA BP369304 Out-of-frame Intra-chr q36.1 q36.1 116077 ChimerSeq ChiTaRs ChiTaRs ZCCHC17-ZCCHC17 ZCCHC17 chr1 31835451 ZCCHC17 chr1 31835321 Exonic hg19 NA BF806504 Out-of-frame Intra-chr p35.2 p35.2 116078 ChimerSeq ChiTaRs ChiTaRs RPL22-PCSK6 RPL22 chr1 6246042 PCSK6 chr15 101870984 Exonic hg19 NA BF846664 Out-of-frame Inter-chr p36.31 q26.3 116079 ChimerSeq ChiTaRs ChiTaRs NOS1AP-NOS1AP NOS1AP chr1 162194757 NOS1AP chr1 162194913 Exonic hg19 NA BU676434 Out-of-frame Intra-chr q23.3 q23.3 116080 ChimerSeq ChiTaRs ChiTaRs AKAP2-AKAP2 AKAP2 chr9 112865915 AKAP2 chr9 112865687 Exonic hg19 NA BF996024 Out-of-frame Intra-chr q31.3 q31.3 116081 ChimerSeq ChiTaRs ChiTaRs MSN-XYLT1 MSN chrX 64895986 XYLT1 chr16 17519773 Exonic hg19 NA BG009784 Out-of-frame Inter-chr q12 p12.3 116082 ChimerSeq ChiTaRs ChiTaRs SSBP1-DLG5 SSBP1 chr7 141450172 DLG5 chr10 79669310 Exonic hg19 NA BQ306484 Out-of-frame Inter-chr q22.3 116083 ChimerSeq ChiTaRs ChiTaRs RAI14-SLC26A7 RAI14 chr5 34826518 SLC26A7 chr8 92295186 Exonic hg19 NA BF987124 Out-of-frame Inter-chr p13.2 q21.3 116084 ChimerSeq ChiTaRs ChiTaRs TRIM55-PSMG3 TRIM55 chr8 67084649 PSMG3 chr7 1606972 Exonic hg19 NA AK056594 Out-of-frame Inter-chr q13.1 p22.3 116085 ChimerSeq ChiTaRs ChiTaRs SNX7-SPATS2L SNX7 chr1 99200701 SPATS2L chr2 201281113 Exonic hg19 NA BU615374 Out-of-frame Inter-chr p21.3 q33.1 116086 ChimerSeq ChiTaRs ChiTaRs TPO-TPO TPO chr2 1497812 TPO chr2 1488388 Exonic hg19 NA BG990924 Out-of-frame Intra-chr 116087 ChimerSeq ChiTaRs ChiTaRs EIF4G2-EIF4G2 EIF4G2 chr11 10825598 EIF4G2 chr11 10823691 Exonic hg19 NA BG822944 Out-of-frame Intra-chr p15.4 p15.4 116088 ChimerSeq ChiTaRs ChiTaRs TTF1-TOM1L2 TTF1 chr9 135262428 TOM1L2 chr17 17747108 Exonic hg19 NA BF813734 Out-of-frame Inter-chr q34.13 Tumor suppressor gene Transcription factor p11.2 Tumor suppressor gene 116089 ChimerSeq ChiTaRs ChiTaRs CTNNA2-RNU5F-1 CTNNA2 chr2 79664061 RNU5F-1 chr1 220238518 Exonic hg19 NA BM666334 Out-of-frame Inter-chr p12 Tumor suppressor gene p34.1 116090 ChimerSeq ChiTaRs ChiTaRs NYAP1-TXNIP NYAP1 chr7 100091931 TXNIP chr1 145442318 Exonic hg19 NA BF934064 Out-of-frame Inter-chr q22.1 q21.1 Tumor suppressor gene 116091 ChimerSeq ChiTaRs ChiTaRs MFHAS1-DDX18 MFHAS1 chr8 8644020 DDX18 chr2 118589189 Exonic hg19 NA BQ349714 Out-of-frame Inter-chr p23.1 q14.1 116092 ChimerSeq ChiTaRs ChiTaRs H2AFV-ATP6V0A2 H2AFV chr7 44867614 ATP6V0A2 chr12 124244217 Exonic hg19 NA BF929914 Out-of-frame Inter-chr p13 q24.31 116093 ChimerSeq ChiTaRs ChiTaRs MTCH1-MTCH1 MTCH1 chr6 36948115 MTCH1 chr6 36947748 Exonic hg19 NA BI006314 Out-of-frame Intra-chr p21.2 p21.2 116094 ChimerSeq ChiTaRs ChiTaRs RAC1-PROKR1 RAC1 chr7 6443519 PROKR1 chr2 68859755 Exonic hg19 NA BF924694 Out-of-frame Inter-chr p22.1 Oncogene p13.3 116095 ChimerSeq ChiTaRs ChiTaRs MYC-MYC MYC chr8 128753464 MYC chr8 128753465 Exonic hg19 NA AW021464 Out-of-frame Intra-chr q24.21 Oncogene Transcription factor q24.21 Oncogene Transcription factor 116096 ChimerSeq ChiTaRs ChiTaRs SDHAF2-PPP1R32 SDHAF2 chr11 61205247 PPP1R32 chr11 61256424 Exonic hg19 NA BG399714 Out-of-frame Intra-chr q12.2 q12.2 116097 ChimerSeq ChiTaRs ChiTaRs NOLC1-IYD NOLC1 chr10 103921646 IYD chr6 150713521 Exonic hg19 NA BG949184 Out-of-frame Inter-chr q24.32 q25.1 116098 ChimerSeq ChiTaRs ChiTaRs CYP1B1-CYP1B1 CYP1B1 chr2 38297220 CYP1B1 chr2 38297364 Exonic hg19 NA BU689794 Out-of-frame Intra-chr p22.2 p22.2 116099 ChimerSeq ChiTaRs ChiTaRs HNRNPF-HNRNPF HNRNPF chr10 43892058 HNRNPF chr10 43891513 Exonic hg19 NA AW375964 Out-of-frame Intra-chr q11.21 q11.21 116100 ChimerSeq ChiTaRs ChiTaRs PPP3CC-PRKAG2 PPP3CC chr8 22384612 PRKAG2 chr7 151253966 Exonic hg19 NA BG007354 Out-of-frame Inter-chr p21.3 Tumor suppressor gene q36.1 116101 ChimerSeq ChiTaRs ChiTaRs ANXA5-CLASP2 ANXA5 chr4 122595172 CLASP2 chr3 33753793 Exonic hg19 NA BG958254 Out-of-frame Inter-chr q27 p22.3 116102 ChimerSeq ChiTaRs ChiTaRs OSTC-DDOST OSTC chr4 109588974 DDOST chr1 20978660 Exonic hg19 NA AW614804 Out-of-frame Inter-chr q25 p36.12 116103 ChimerSeq ChiTaRs ChiTaRs COL6A3-EBF1 COL6A3 chr2 238232936 EBF1 chr5 158283657 Exonic hg19 NA AW082894 Out-of-frame Inter-chr q37.3 q33.3 Transcription factor 116104 ChimerSeq ChiTaRs ChiTaRs ADAM12-CLIP1 ADAM12 chr10 127957500 CLIP1 chr12 122821105 Exonic hg19 NA BF986124 Out-of-frame Inter-chr q26.2 q24.31 116105 ChimerSeq ChiTaRs ChiTaRs CUX1-ANPEP CUX1 chr7 101461904 ANPEP chr15 90347120 Exonic hg19 NA BQ882584 Out-of-frame Inter-chr q22.1 Tumor suppressor gene Transcription factor q26.1 116106 ChimerSeq ChiTaRs ChiTaRs UBQLN1-DGKH UBQLN1 chr9 86306939 DGKH chr13 42708464 Exonic hg19 NA BG571504 Out-of-frame Inter-chr q21.32 q14.11 116107 ChimerSeq ChiTaRs ChiTaRs PTCH1-LOC100507246 PTCH1 chr9 98275354 LOC100507246 chr17 74560603 Exonic hg19 NA BQ231164 Out-of-frame Inter-chr q22.32 Oncogene Tumor suppressor gene 116108 ChimerSeq ChiTaRs ChiTaRs HNRPDL-HNRPDL HNRPDL chr4 83345864 HNRPDL chr4 83345864 Exonic hg19 NA BU607354 Out-of-frame Intra-chr 116109 ChimerSeq ChiTaRs ChiTaRs ITM2A-LUC7L ITM2A chrX 78618580 LUC7L chr16 239036 Exonic hg19 NA BF931704 Out-of-frame Inter-chr q21.1 p13.3 116110 ChimerSeq ChiTaRs ChiTaRs AHDC1-AHDC1 AHDC1 chr1 27867139 AHDC1 chr1 27868140 Exonic hg19 NA AK026294 Out-of-frame Intra-chr p35.3 Transcription factor p35.3 Transcription factor 116111 ChimerSeq ChiTaRs ChiTaRs RNF187-PLCB4 RNF187 chr1 228682668 PLCB4 chr20 9223560 Exonic hg19 NA AW519364 Out-of-frame Inter-chr q42.13 p12.3 116112 ChimerSeq ChiTaRs ChiTaRs WDR33-RPLP1 WDR33 chr2 128476880 RPLP1 chr15 69745187 Exonic hg19 NA BI006044 Out-of-frame Inter-chr q14.3 q23 116113 ChimerSeq ChiTaRs ChiTaRs PRRC2B-STC1 PRRC2B chr9 134374250 STC1 chr8 23702296 Exonic hg19 NA BF854554 Out-of-frame Inter-chr q34.13 p21.2 116114 ChimerSeq ChiTaRs ChiTaRs IMMT-IMMT IMMT chr2 86371301 IMMT chr2 86371374 Exonic hg19 NA BU675384 Out-of-frame Intra-chr p11.2 p11.2 116115 ChimerSeq ChiTaRs ChiTaRs PSTK-SLCO1A2 PSTK chr10 124745496 SLCO1A2 chr12 21531462 Exonic hg19 NA BQ786844 Out-of-frame Inter-chr q26.13 p12.1 116116 ChimerSeq ChiTaRs ChiTaRs ALK-RNPC3 ALK chr2 29814621 RNPC3 chr1 104087661 Exonic hg19 NA BG991454 Out-of-frame Inter-chr p23.1 TK:ALK Oncogene p21.1 116117 ChimerSeq ChiTaRs ChiTaRs CHM-EDEM1 CHM chrX 85128421 EDEM1 chr3 5259964 Exonic hg19 NA AW372554 Out-of-frame Inter-chr q21.2 p26.1 116118 ChimerSeq ChiTaRs ChiTaRs DNMBP-PER1 DNMBP chr10 101635993 PER1 chr17 8050160 Exonic hg19 NA BF849664 Out-of-frame Inter-chr q24.2 p13.1 Oncogene 116119 ChimerSeq ChiTaRs ChiTaRs VAV3-VAV3 VAV3 chr1 108113863 VAV3 chr1 108113833 Exonic hg19 NA BU674434 Out-of-frame Intra-chr p13.3 p13.3 116120 ChimerSeq ChiTaRs ChiTaRs TRIM33-TRIM33 TRIM33 chr1 115005814 TRIM33 chr1 115005726 Exonic hg19 NA BF950854 Out-of-frame Intra-chr p13.2 Oncogene p13.2 Oncogene 116121 ChimerSeq ChiTaRs ChiTaRs PDGFRA-FAM204A PDGFRA chr4 54343008 FAM204A chr10 120085733 Exonic hg19 NA BF819034 Out-of-frame Inter-chr q12 Oncogene q26.11 116122 ChimerSeq ChiTaRs ChiTaRs MIR548N-BBX MIR548N chr2 179476513 BBX chr3 107492124 Exonic hg19 NA BQ355244 Out-of-frame Inter-chr p14.2 q13.12 Transcription factor 116123 ChimerSeq ChiTaRs ChiTaRs MYO6-MYO6 MYO6 chr6 76591535 MYO6 chr6 76570792 Exonic hg19 NA AW151244 Out-of-frame Intra-chr q14.1 q14.1 116124 ChimerSeq ChiTaRs ChiTaRs LARP1B-FBLN1 LARP1B chr4 129003455 FBLN1 chr22 45927170 Exonic hg19 NA BF873944 Out-of-frame Inter-chr q28.2 q13.31 Tumor suppressor gene 116125 ChimerSeq ChiTaRs ChiTaRs INTS3-L3MBTL4 INTS3 chr1 153745536 L3MBTL4 chr18 6375417 Exonic hg19 NA BF913064 Out-of-frame Inter-chr q21.3 p11.31 Tumor suppressor gene Transcription factor 116126 ChimerSeq ChiTaRs ChiTaRs DENND5A-DENND5A DENND5A chr11 9167314 DENND5A chr11 9163514 Exonic hg19 NA BG258354 Out-of-frame Intra-chr p15.4 p15.4 116127 ChimerSeq ChiTaRs ChiTaRs NKAIN2-NEK1 NKAIN2 chr6 124812714 NEK1 chr4 170407936 Exonic hg19 NA AW813844 Out-of-frame Inter-chr q22.31 q33 Other:NEK 116128 ChimerSeq ChiTaRs ChiTaRs EGR3-UBXN11 EGR3 chr8 22549049 UBXN11 chr1 26608893 Exonic hg19 NA BI003584 Out-of-frame Inter-chr p21.3 Transcription factor p36.11 116129 ChimerSeq ChiTaRs ChiTaRs ARIH2-ARIH2 ARIH2 chr3 49022291 ARIH2 chr3 49022284 Exonic hg19 NA AL162034 Out-of-frame Intra-chr p21.31 p21.31 116130 ChimerSeq ChiTaRs ChiTaRs UBQLN1-UBQLN1 UBQLN1 chr9 86278874 UBQLN1 chr9 86284100 Exonic hg19 NA BG005194 Out-of-frame Intra-chr q21.32 q21.32 116131 ChimerSeq ChiTaRs ChiTaRs CCHCR1-CDA CCHCR1 chr6 2413749 CDA chr1 20938233 Exonic hg19 NA BF901504 Out-of-frame Inter-chr p36.12 116132 ChimerSeq ChiTaRs ChiTaRs CNPPD1-TGM2 CNPPD1 chr2 220037685 TGM2 chr20 36756863 Exonic hg19 NA BG253144 CDS-3'UTR Inter-chr q35 q11.23 116133 ChimerSeq ChiTaRs ChiTaRs SETD5-SETD5 SETD5 chr3 9519628 SETD5 chr3 9517370 Exonic hg19 NA BU619874 Out-of-frame Intra-chr p25.3 p25.3 116134 ChimerSeq ChiTaRs ChiTaRs C9orf91-ZNF532 C9orf91 chr9 117377101 ZNF532 chr18 56625164 Exonic hg19 NA AK075254 Out-of-frame Inter-chr q21.32 Transcription factor 116135 ChimerSeq ChiTaRs ChiTaRs ACAT2-ACAT2 ACAT2 chr6 160199294 ACAT2 chr6 160199530 Exonic hg19 NA BG766524 Out-of-frame Intra-chr q25.3 q25.3 116136 ChimerSeq ChiTaRs ChiTaRs RNF19A-RNF19A RNF19A chr8 101299981 RNF19A chr8 101300223 Exonic hg19 NA AK001774 Out-of-frame Intra-chr q22.2 q22.2 116137 ChimerSeq ChiTaRs ChiTaRs KIAA0040-RAC1 KIAA0040 chr1 175126854 RAC1 chr7 6441340 Exonic hg19 NA BG945624 Out-of-frame Inter-chr q25.1 p22.1 Oncogene 116138 ChimerSeq ChiTaRs ChiTaRs GRM8-GANAB GRM8 chr7 126524998 GANAB chr11 62392486 Exonic hg19 NA BF893584 Out-of-frame Inter-chr q31.33 Oncogene q12.3 Tumor suppressor gene 116139 ChimerSeq ChiTaRs ChiTaRs GPR126-GPR126 GPR126 chr6 142764664 GPR126 chr6 142740995 Exonic hg19 NA BQ218064 Out-of-frame Intra-chr 116140 ChimerSeq ChiTaRs ChiTaRs ELF4-CREB5 ELF4 chrX 129199174 CREB5 chr7 28475097 Exonic hg19 NA BF849574 Out-of-frame Inter-chr q26.1 Transcription factor p15.1 Transcription factor 116141 ChimerSeq ChiTaRs ChiTaRs SBF2-ATP6V0A1 SBF2 chr11 10059122 ATP6V0A1 chr17 40661277 Exonic hg19 NA BF905814 Out-of-frame Inter-chr p15.4 q21.2 116142 ChimerSeq ChiTaRs ChiTaRs FBXL18-ARPC4-TTLL3 FBXL18 chr7 5553419 ARPC4-TTLL3 chr3 9877018 Exonic hg19 NA AK130444 Out-of-frame Inter-chr p22.1 p25.3 116143 ChimerSeq ChiTaRs ChiTaRs RAC1-PTPN11 RAC1 chr7 6418352 PTPN11 chr12 112898454 Exonic hg19 NA AW811214 Out-of-frame Inter-chr p22.1 Oncogene q24.13 Oncogene Tumor suppressor gene 116144 ChimerSeq ChiTaRs ChiTaRs FN1-IQCG FN1 chr2 216235227 IQCG chr3 197677064 Exonic hg19 NA BF893174 Out-of-frame Inter-chr q35 Oncogene q29 116145 ChimerSeq ChiTaRs ChiTaRs RPS13-RPS13 RPS13 chr11 17099201 RPS13 chr11 17096644 Exonic hg19 NA BU195584 Out-of-frame Intra-chr p15.1 p15.1 116146 ChimerSeq ChiTaRs ChiTaRs PNMA2-KIAA0319L PNMA2 chr8 26363204 KIAA0319L chr1 35917236 Exonic hg19 NA AK022734 Out-of-frame Inter-chr p21.2 p34.3 116147 ChimerSeq ChiTaRs ChiTaRs GRB10-R3HDM1 GRB10 chr7 50839476 R3HDM1 chr2 136465662 Exonic hg19 NA BF985684 Out-of-frame Inter-chr p12.1 q21.3 116148 ChimerSeq ChiTaRs ChiTaRs IL22RA1-MESDC2 IL22RA1 chr1 24447618 MESDC2 chr15 81274435 Exonic hg19 NA BG999454 Out-of-frame Inter-chr p36.11 q25.1 116149 ChimerSeq ChiTaRs ChiTaRs FAM219A-FAM219A FAM219A chr9 34458536 FAM219A chr9 34398487 Exonic hg19 NA AI961774 Out-of-frame Intra-chr p13.3 p13.3 116150 ChimerSeq ChiTaRs ChiTaRs TAPT1-LYST TAPT1 chr4 16222716 LYST chr1 235864416 Exonic hg19 NA BF897244 Out-of-frame Inter-chr p15.32 q42.3 116151 ChimerSeq ChiTaRs ChiTaRs SEC62-SEC62 SEC62 chr3 169700665 SEC62 chr3 169700959 Exonic hg19 NA BU676684 Out-of-frame Intra-chr q26.2 q26.2 116152 ChimerSeq ChiTaRs ChiTaRs SLC1A2-AP4M1 SLC1A2 chr11 35274643 AP4M1 chr7 99699510 Exonic hg19 NA BF922824 Out-of-frame Inter-chr p13 q22.1 116153 ChimerSeq ChiTaRs ChiTaRs PUM2-VPS35 PUM2 chr2 20488814 VPS35 chr16 46694104 Exonic hg19 NA AK025774 Out-of-frame Inter-chr p24.1 q11.2 116154 ChimerSeq ChiTaRs ChiTaRs EYS-SCARB2 EYS chr6 64489077 SCARB2 chr4 77080171 Exonic hg19 NA AV711464 Out-of-frame Inter-chr q12 q21.1 116155 ChimerSeq ChiTaRs ChiTaRs PRKAG2-SMU1 PRKAG2 chr7 151454489 SMU1 chr9 33057606 Exonic hg19 NA BF912904 Out-of-frame Inter-chr q36.1 p21.1 116156 ChimerSeq ChiTaRs ChiTaRs MLLT3-MLL MLLT3 chr9 20373122 MLL chr11 118359141 Exonic hg19 NA AY282405 Out-of-frame Inter-chr p21.3 q23.3 116157 ChimerSeq ChiTaRs ChiTaRs SLC50A1-SNHG1 SLC50A1 chr1 155110106 SNHG1 chr11 62620013 Exonic hg19 NA AW794624 Out-of-frame Inter-chr q22 q12.3 116158 ChimerSeq ChiTaRs ChiTaRs FAAH-FAAH FAAH chr1 46879292 FAAH chr1 46878785 Exonic hg19 NA BF766834 Out-of-frame Intra-chr p33 p33 116159 ChimerSeq ChiTaRs ChiTaRs FBP1-AHCTF1 FBP1 chr9 97365780 AHCTF1 chr1 247075362 Exonic hg19 NA BF806754 Out-of-frame Inter-chr q22.32 Tumor suppressor gene q44 Transcription factor 116160 ChimerSeq ChiTaRs ChiTaRs CPSF3L-CPSF3L CPSF3L chr1 1247657 CPSF3L chr1 1248168 Exonic hg19 NA BQ326324 Out-of-frame Intra-chr 116161 ChimerSeq ChiTaRs ChiTaRs STMN1-STARD7 STMN1 chr1 26232898 STARD7 chr2 96874288 Exonic hg19 NA BQ946944 Out-of-frame Inter-chr p36.11 q11.2 116162 ChimerSeq ChiTaRs ChiTaRs ADCY1-JUN ADCY1 chr7 45761756 JUN chr1 59248643 Exonic hg19 NA BG315024 Out-of-frame Inter-chr p12.3 p32.1 Oncogene Transcription factor 116163 ChimerSeq ChiTaRs ChiTaRs GNE-GNE GNE chr9 36214755 GNE chr9 36214960 Exonic hg19 NA BQ417504 Out-of-frame Intra-chr p13.3 p13.3 116164 ChimerSeq ChiTaRs ChiTaRs NES-NOS3 NES chr1 156641128 NOS3 chr7 150711426 Exonic hg19 NA BF955684 Out-of-frame Inter-chr q23.1 q36.1 116165 ChimerSeq ChiTaRs ChiTaRs RPS24-RPS24 RPS24 chr10 79800385 RPS24 chr10 79800088 Exonic hg19 NA AW130504 Out-of-frame Intra-chr q22.3 q22.3 116166 ChimerSeq ChiTaRs ChiTaRs RBM6-MAP1B RBM6 chr3 50003705 MAP1B chr5 71504065 Exonic hg19 NA BF921414 Out-of-frame Inter-chr p21.31 Tumor suppressor gene q13.2 116167 ChimerSeq ChiTaRs ChiTaRs WDFY4-TNRC6A WDFY4 chr10 50000165 TNRC6A chr16 24816404 Exonic hg19 NA AV730574 Out-of-frame Inter-chr q11.23 p12.1 116168 ChimerSeq ChiTaRs ChiTaRs ABHD14B-CHST5 ABHD14B chr3 52008065 CHST5 chr16 75572202 Exonic hg19 NA AK075034 Out-of-frame Inter-chr p21.2 q23.1 116169 ChimerSeq ChiTaRs ChiTaRs TIAM2-MKLN1 TIAM2 chr6 155161303 MKLN1 chr7 131124903 Exonic hg19 NA BQ371784 Out-of-frame Inter-chr q25.2 q32.3 116170 ChimerSeq ChiTaRs ChiTaRs DNAH11-CLSTN1 DNAH11 chr7 21759373 CLSTN1 chr1 9801164 Exonic hg19 NA BG323744 Out-of-frame Inter-chr p15.3 p36.22 116171 ChimerSeq ChiTaRs ChiTaRs EDIL3-ABAT EDIL3 chr5 83449119 ABAT chr16 8835173 Exonic hg19 NA BF944944 Out-of-frame Inter-chr q14.3 p13.2 116172 ChimerSeq ChiTaRs ChiTaRs MRPS10-PPID MRPS10 chr6 42175408 PPID chr4 159630286 Exonic hg19 NA AV681824 Out-of-frame Inter-chr p21.1 q32.1 116173 ChimerSeq ChiTaRs ChiTaRs DNAJC21-TMEM106B DNAJC21 chr5 34950311 TMEM106B chr7 12250986 Exonic hg19 NA BQ310434 Out-of-frame Inter-chr p13.2 p21.3 116174 ChimerSeq ChiTaRs ChiTaRs CNKSR3-CNKSR3 CNKSR3 chr6 154778592 CNKSR3 chr6 154779445 Exonic hg19 NA AK027364 Out-of-frame Intra-chr q25.2 q25.2 116175 ChimerSeq ChiTaRs ChiTaRs TBC1D1-CRMP1 TBC1D1 chr4 38016251 CRMP1 chr4 5836506 Exonic hg19 NA AW014054 Out-of-frame Intra-chr p14 p16.2 116176 ChimerSeq ChiTaRs ChiTaRs CLCN6-CLCN6 CLCN6 chr1 11902598 CLCN6 chr1 11902746 Exonic hg19 NA BG952004 Out-of-frame Intra-chr p36.22 p36.22 116177 ChimerSeq ChiTaRs ChiTaRs RPS6-CASP8 RPS6 chr9 19378792 CASP8 chr2 202098783 Exonic hg19 NA BG575834 Out-of-frame Inter-chr p22.1 q33.1 Oncogene Tumor suppressor gene 116178 ChimerSeq ChiTaRs ChiTaRs FXR1-C6orf106 FXR1 chr3 180653010 C6orf106 chr6 34555061 Exonic hg19 NA BU566094 Out-of-frame Inter-chr q26.33 p21.31 116179 ChimerSeq ChiTaRs ChiTaRs TEX10-WSB1 TEX10 chr9 103070151 WSB1 chr17 25639972 Exonic hg19 NA AK091514 Out-of-frame Inter-chr q31.1 q11.1 116180 ChimerSeq ChiTaRs ChiTaRs ARHGEF3-ILVBL ARHGEF3 chr3 56763618 ILVBL chr19 15233779 Exonic hg19 NA BG978304 Out-of-frame Inter-chr p14.3 p13.12 116181 ChimerSeq ChiTaRs ChiTaRs SLC1A2-SLC1A2 SLC1A2 chr11 35273755 SLC1A2 chr11 35273924 Exonic hg19 NA BF945504 Out-of-frame Intra-chr p13 p13 116182 ChimerSeq ChiTaRs ChiTaRs EIF5B-EIF5B EIF5B chr2 99976793 EIF5B chr2 99976932 Exonic hg19 NA AI699584 Out-of-frame Intra-chr q11.2 q11.2 116183 ChimerSeq ChiTaRs ChiTaRs GLMN-FXYD5 GLMN chr1 92726793 FXYD5 chr19 35660726 Exonic hg19 NA AV692154 Out-of-frame Inter-chr p22.1 q13.12 116184 ChimerSeq ChiTaRs ChiTaRs PTGES2-PTGES2 PTGES2 chr9 130889802 PTGES2 chr9 130885212 Exonic hg19 NA BG342124 Out-of-frame Intra-chr q34.11 q34.11 116185 ChimerSeq ChiTaRs ChiTaRs CYR61-KCTD15 CYR61 chr1 86047511 KCTD15 chr19 34304071 Exonic hg19 NA BF855984 Out-of-frame Inter-chr p22.3 q13.11 116186 ChimerSeq ChiTaRs ChiTaRs ARF1-ARF1 ARF1 chr1 228285802 ARF1 chr1 228285789 Exonic hg19 NA BF893864 Out-of-frame Intra-chr q42.13 Tumor suppressor gene q42.13 Tumor suppressor gene 116187 ChimerSeq ChiTaRs ChiTaRs PHF14-CACNA2D1 PHF14 chr7 11209232 CACNA2D1 chr7 81964450 Exonic hg19 NA BG220754 5'UTR-CDS Intra-chr p21.3 q21.11 116188 ChimerSeq ChiTaRs ChiTaRs GTF3C4-PSMC2 GTF3C4 chr9 135559600 PSMC2 chr7 102988089 Exonic hg19 NA AU118024 Out-of-frame Inter-chr q34.13 q22.1 116189 ChimerSeq ChiTaRs ChiTaRs RABGAP1L-RNF212 RABGAP1L chr1 174215495 RNF212 chr4 1103113 Exonic hg19 NA AW173344 Out-of-frame Inter-chr q25.1 p16.3 116190 ChimerSeq ChiTaRs ChiTaRs AHDC1-AHDC1 AHDC1 chr1 27876979 AHDC1 chr1 27878337 Exonic hg19 NA AI983324 Out-of-frame Intra-chr p35.3 Transcription factor p35.3 Transcription factor 116191 ChimerSeq ChiTaRs ChiTaRs RAPGEF1-MALAT1 RAPGEF1 chr9 134573581 MALAT1 chr11 65269733 Exonic hg19 NA BF935964 Out-of-frame Inter-chr q34.13 q13.1 116192 ChimerSeq ChiTaRs ChiTaRs FNBP4-FNBP4 FNBP4 chr11 47772844 FNBP4 chr11 47752926 Exonic hg19 NA AI885774 Out-of-frame Intra-chr p11.2 p11.2 116193 ChimerSeq ChiTaRs ChiTaRs LOC402160-FARS2 LOC402160 chr4 2454287 FARS2 chr6 5513282 Exonic hg19 NA BU740464 Out-of-frame Inter-chr p25.1 116194 ChimerSeq ChiTaRs ChiTaRs EMB-KIAA1147 EMB chr5 50029931 KIAA1147 chr7 141360722 Exonic hg19 NA BF925974 Out-of-frame Inter-chr q11.1 116195 ChimerSeq ChiTaRs ChiTaRs AGBL4-AGBL4 AGBL4 chr1 49224857 AGBL4 chr1 49193618 Exonic hg19 NA BQ478184 Out-of-frame Intra-chr p33 p33 116196 ChimerSeq ChiTaRs ChiTaRs AHNAK-AHNAK AHNAK chr11 62285762 AHNAK chr11 62285891 Exonic hg19 NA AJ708794 Out-of-frame Intra-chr q12.3 Tumor suppressor gene q12.3 Tumor suppressor gene 116197 ChimerSeq ChiTaRs ChiTaRs MAPK8-LOC284998 MAPK8 chr10 49617977 LOC284998 chr2 105365834 Exonic hg19 NA BF818384 Out-of-frame Inter-chr q11.22 Oncogene 116198 ChimerSeq ChiTaRs ChiTaRs TSEN15-PPP2R2A TSEN15 chr1 184190216 PPP2R2A chr8 26164337 Exonic hg19 NA AW170574 Out-of-frame Inter-chr q25.3 p21.2 116199 ChimerSeq ChiTaRs ChiTaRs SFXN3-PSPH SFXN3 chr10 102800391 PSPH chr7 56169683 Exonic hg19 NA AK091504 Out-of-frame Inter-chr q24.31 p11.2 116200 ChimerSeq ChiTaRs ChiTaRs PRG2-NTPCR PRG2 chr11 57177438 NTPCR chr1 233112315 Exonic hg19 NA BF837614 Out-of-frame Inter-chr q12.1 q42.2 116201 ChimerSeq ChiTaRs ChiTaRs FMOD-FMOD FMOD chr1 203309871 FMOD chr1 203311183 Exonic hg19 NA BG901094 Out-of-frame Intra-chr q32.1 q32.1 116202 ChimerSeq ChiTaRs ChiTaRs NSUN2-NSUN2 NSUN2 chr5 6605464 NSUN2 chr5 6607332 Exonic hg19 NA BQ308344 Out-of-frame Intra-chr p15.31 p15.31 116203 ChimerSeq ChiTaRs ChiTaRs SPTBN1-GPATCH1 SPTBN1 chr2 54872438 GPATCH1 chr19 33616011 Exonic hg19 NA BF849874 Out-of-frame Inter-chr p16.2 Tumor suppressor gene q13.11 116204 ChimerSeq ChiTaRs ChiTaRs DAP-DAP DAP chr5 10761181 DAP chr5 10680910 Exonic hg19 NA AI906374 Out-of-frame Intra-chr p15.2 p15.2 116205 ChimerSeq ChiTaRs ChiTaRs CORIN-HECW2 CORIN chr4 47774381 HECW2 chr2 197069585 Exonic hg19 NA BG429734 Out-of-frame Inter-chr p12 q32.3 116206 ChimerSeq ChiTaRs ChiTaRs MRPS18C-DDX21 MRPS18C chr4 84382390 DDX21 chr10 70719718 Exonic hg19 NA BQ776304 Out-of-frame Inter-chr q21.23 q22.1 116207 ChimerSeq ChiTaRs ChiTaRs PKP1-MNT PKP1 chr1 201291158 MNT chr17 2291894 Exonic hg19 NA BG990024 Out-of-frame Inter-chr q32.1 p13.3 Tumor suppressor gene Transcription factor 116208 ChimerSeq ChiTaRs ChiTaRs TXNIP-TXNIP TXNIP chr1 145440055 TXNIP chr1 145440127 Exonic hg19 NA AI949744 Out-of-frame Intra-chr q21.1 Tumor suppressor gene q21.1 Tumor suppressor gene 116209 ChimerSeq ChiTaRs ChiTaRs GPBP1-ERI2 GPBP1 chr5 56539247 ERI2 chr16 20817846 Exonic hg19 NA AK057254 Out-of-frame Inter-chr q11.2 Transcription factor p12.3 116210 ChimerSeq ChiTaRs ChiTaRs RBM6-LINC00340 RBM6 chr3 50131220 LINC00340 chr6 21740831 Exonic hg19 NA AU118664 Out-of-frame Inter-chr p21.31 Tumor suppressor gene 116211 ChimerSeq ChiTaRs ChiTaRs UTP3-UTP3 UTP3 chr4 71555547 UTP3 chr4 71554514 Exonic hg19 NA BF834334 Out-of-frame Intra-chr q13.3 q13.3 116212 ChimerSeq ChiTaRs ChiTaRs CFP-LOC154092 CFP chrX 47483681 LOC154092 chr6 134816894 Exonic hg19 NA AW293694 Out-of-frame Inter-chr p11.23 116213 ChimerSeq ChiTaRs ChiTaRs SDHA-NCL SDHA chr5 225586 NCL chr2 232325555 Exonic hg19 NA BQ349724 Out-of-frame Inter-chr p15.33 Oncogene Tumor suppressor gene q37.1 116214 ChimerSeq ChiTaRs ChiTaRs ALS2-ALS2 ALS2 chr2 202565756 ALS2 chr2 202565783 Exonic hg19 NA BU680244 Out-of-frame Intra-chr q33.1 q33.1 116215 ChimerSeq ChiTaRs ChiTaRs RAD54L-VASH2 RAD54L chr1 46719596 VASH2 chr1 213127771 Exonic hg19 NA BF909704 Out-of-frame Intra-chr p34.1 q32.3 116216 ChimerSeq ChiTaRs ChiTaRs SLC25A32-LIG1 SLC25A32 chr8 104412551 LIG1 chr19 48626867 Exonic hg19 NA BG612824 Out-of-frame Inter-chr q22.3 q13.33 Tumor suppressor gene 116217 ChimerSeq ChiTaRs ChiTaRs CACNB2-PCGF2 CACNB2 chr10 18822031 PCGF2 chr17 36894605 Exonic hg19 NA AW005394 Out-of-frame Inter-chr p12.33 Tumor suppressor gene Transcription factor 116218 ChimerSeq ChiTaRs ChiTaRs C8orf44-RAD17 C8orf44 chr8 67580665 RAD17 chr5 68666385 Exonic hg19 NA AK123514 Out-of-frame Inter-chr q13.1 116219 ChimerSeq ChiTaRs ChiTaRs RRP12-ARRB1 RRP12 chr10 99148273 ARRB1 chr11 74983946 Exonic hg19 NA BF906634 Out-of-frame Inter-chr q24.1 q13.4 116220 ChimerSeq ChiTaRs ChiTaRs IGFBP2-FXR1 IGFBP2 chr2 217529159 FXR1 chr3 180685838 Exonic hg19 NA AW451314 3'UTR-CDS Inter-chr q35 q26.33 116221 ChimerSeq ChiTaRs ChiTaRs TMCC1-SNRPB TMCC1 chr3 129513228 SNRPB chr20 2443998 Exonic hg19 NA BF871894 Out-of-frame Inter-chr q22.1 p13 116222 ChimerSeq ChiTaRs ChiTaRs MSX1-MSX1 MSX1 chr4 4865663 MSX1 chr4 4865033 Exonic hg19 NA BU624994 Out-of-frame Intra-chr p16.2 Transcription factor p16.2 Transcription factor 116223 ChimerSeq ChiTaRs ChiTaRs CNOT8-GOLGB1 CNOT8 chr5 154244876 GOLGB1 chr3 121411199 Exonic hg19 NA BF901254 Out-of-frame Inter-chr q33.2 q13.33 116224 ChimerSeq ChiTaRs ChiTaRs BGN-FLNC BGN chrX 152775004 FLNC chr7 128478739 Exonic hg19 NA AW340724 3'UTR-CDS Inter-chr q28 q32.1 116225 ChimerSeq ChiTaRs ChiTaRs EHBP1-BLOC1S2 EHBP1 chr2 63259438 BLOC1S2 chr10 102040787 Exonic hg19 NA BF830694 Out-of-frame Inter-chr p15 q24.31 116226 ChimerSeq ChiTaRs ChiTaRs DGKG-TECPR2 DGKG chr3 185906035 TECPR2 chr14 102846004 Exonic hg19 NA BF902754 Out-of-frame Inter-chr q27.3 q32.31 116227 ChimerSeq ChiTaRs ChiTaRs EHMT1-LOC100507412 EHMT1 chr9 140648659 LOC100507412 chr? 115063 Exonic hg19 NA BF997554 Out-of-frame Inter-chr q34.3 116228 ChimerSeq ChiTaRs ChiTaRs SETDB1-ACTG1 SETDB1 chr1 150936215 ACTG1 chr17 79477700 Exonic hg19 NA BG006984 Out-of-frame Inter-chr q21.3 Transcription factor q25.3 116229 ChimerSeq ChiTaRs ChiTaRs RNF149-C1orf43 RNF149 chr2 101893937 C1orf43 chr1 154181920 Exonic hg19 NA AW391384 Out-of-frame Inter-chr q11.2 q21.3 116230 ChimerSeq ChiTaRs ChiTaRs C6orf62-GRHL1 C6orf62 chr6 24706008 GRHL1 chr2 10102599 Exonic hg19 NA BG013794 Out-of-frame Inter-chr p22.3 p25.1 Transcription factor 116231 ChimerSeq ChiTaRs ChiTaRs GALNT2-MEMO1 GALNT2 chr1 230410299 MEMO1 chr2 32217481 Exonic hg19 NA BQ335474 Out-of-frame Inter-chr q42.13 p22.3 116232 ChimerSeq ChiTaRs ChiTaRs ADAM12-FLNA ADAM12 chr10 127730766 FLNA chrX 153589866 Exonic hg19 NA BF996714 Out-of-frame Inter-chr q26.2 q28 Tumor suppressor gene 116233 ChimerSeq ChiTaRs ChiTaRs IFI6-CTNS IFI6 chr1 27992686 CTNS chr17 3543508 Exonic hg19 NA AI954514 Out-of-frame Inter-chr p35.3 p13.2 116234 ChimerSeq ChiTaRs ChiTaRs RAI14-SORBS2 RAI14 chr5 34661662 SORBS2 chr4 186720373 Exonic hg19 NA BF844204 Out-of-frame Inter-chr p13.2 q35.1 116235 ChimerSeq ChiTaRs ChiTaRs STK3-STK3 STK3 chr8 99591943 STK3 chr8 99591935 Exonic hg19 NA AW607434 Out-of-frame Intra-chr q22.2 q22.2 116236 ChimerSeq ChiTaRs ChiTaRs COPG1-ANKRD11 COPG1 chr3 128984461 ANKRD11 chr16 89371674 Exonic hg19 NA BG983694 Out-of-frame Inter-chr q21.3 q24.3 116237 ChimerSeq ChiTaRs ChiTaRs TGOLN2-PSME2 TGOLN2 chr2 85548383 PSME2 chr14 24613284 Exonic hg19 NA BG999584 Out-of-frame Inter-chr p11.2 q12 116238 ChimerSeq ChiTaRs ChiTaRs ZMYND19-PXN ZMYND19 chr9 140484725 PXN chr12 120662116 Exonic hg19 NA BF798414 Out-of-frame Inter-chr q34.3 q24.23 116239 ChimerSeq ChiTaRs ChiTaRs SUB1-HNRNPA2B1 SUB1 chr5 32597105 HNRNPA2B1 chr7 26237296 Exonic hg19 NA AW373634 Out-of-frame Inter-chr p13.3 p15.2 116240 ChimerSeq ChiTaRs ChiTaRs SRGAP2B-SRGAP2B SRGAP2B chr1 143967007 SRGAP2B chr1 143924155 Exonic hg19 NA AK057874 Out-of-frame Intra-chr q21.1 q21.1 116241 ChimerSeq ChiTaRs ChiTaRs ATG5-ATG5 ATG5 chr6 106633851 ATG5 chr6 106633908 Exonic hg19 NA BU689614 Out-of-frame Intra-chr q21 q21 116242 ChimerSeq ChiTaRs ChiTaRs RHOA-RHOA RHOA chr3 49397076 RHOA chr3 49396920 Exonic hg19 NA BF996564 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Oncogene Tumor suppressor gene 116243 ChimerSeq ChiTaRs ChiTaRs HMP19-RNF220 HMP19 chr5 173505316 RNF220 chr1 45115663 Exonic hg19 NA AI800074 Out-of-frame Inter-chr q35.2 p34.1 116244 ChimerSeq ChiTaRs ChiTaRs PTPRK-UACA PTPRK chr6 128418944 UACA chr15 70961256 Exonic hg19 NA BG959344 Out-of-frame Inter-chr Tumor suppressor gene q23 116245 ChimerSeq ChiTaRs ChiTaRs GHR-H2AFY GHR chr5 42465605 H2AFY chr5 134696187 Exonic hg19 NA BG015354 Out-of-frame Intra-chr p13.1 q31.1 116246 ChimerSeq ChiTaRs ChiTaRs COPA-COPA COPA chr1 160259954 COPA chr1 160259385 Exonic hg19 NA BG257354 Out-of-frame Intra-chr q23.2 q23.2 116247 ChimerSeq ChiTaRs ChiTaRs PPAP2B-PPAP2B PPAP2B chr1 57034783 PPAP2B chr1 57036048 Exonic hg19 NA AU120214 Out-of-frame Intra-chr 116248 ChimerSeq ChiTaRs ChiTaRs APH1A-APH1A APH1A chr1 150238336 APH1A chr1 150238463 Exonic hg19 NA BG982654 Out-of-frame Intra-chr q21.2 q21.2 116249 ChimerSeq ChiTaRs ChiTaRs RBPJ-FRYL RBPJ chr4 26366172 FRYL chr4 48499769 Exonic hg19 NA BG983944 Out-of-frame Intra-chr p15.2 Transcription factor p11 116250 ChimerSeq ChiTaRs ChiTaRs GLRX-GLRX GLRX chr5 95149735 GLRX chr5 95149769 Exonic hg19 NA BU674954 Out-of-frame Intra-chr q15 q15 116251 ChimerSeq ChiTaRs ChiTaRs ABCA2-CHMP1A ABCA2 chr9 139923259 CHMP1A chr16 89713320 Exonic hg19 NA BQ943214 Out-of-frame Inter-chr q34.3 q24.3 116252 ChimerSeq ChiTaRs ChiTaRs RNF141-KRT5 RNF141 chr11 10539403 KRT5 chr12 52911919 Exonic hg19 NA BQ348264 Out-of-frame Inter-chr p15.4 q13.13 116253 ChimerSeq ChiTaRs ChiTaRs FAM167A-FAM167A FAM167A chr8 11311795 FAM167A chr8 11313506 Exonic hg19 NA AW409204 Out-of-frame Intra-chr p23.1 p23.1 116254 ChimerSeq ChiTaRs ChiTaRs PSMD5-PSMD5 PSMD5 chr9 123578802 PSMD5 chr9 123578901 Exonic hg19 NA BU607444 Out-of-frame Intra-chr q33.2 q33.2 116255 ChimerSeq ChiTaRs ChiTaRs TNFAIP8-SCARB2 TNFAIP8 chr5 118644073 SCARB2 chr4 77081227 Exonic hg19 NA BQ325084 Out-of-frame Inter-chr q23.1 q21.1 116256 ChimerSeq ChiTaRs ChiTaRs TMEM131-TMEM131 TMEM131 chr2 98373171 TMEM131 chr2 98373406 Exonic hg19 NA AW117254 Out-of-frame Intra-chr q11.2 q11.2 116257 ChimerSeq ChiTaRs ChiTaRs ELMO1-IFT88 ELMO1 chr7 37482507 IFT88 chr13 21246205 Exonic hg19 NA BG991634 Out-of-frame Inter-chr p14.1 q12.11 Tumor suppressor gene 116258 ChimerSeq ChiTaRs ChiTaRs TIAM2-PAPD4 TIAM2 chr6 155187739 PAPD4 chr5 78948775 Exonic hg19 NA BF935734 Out-of-frame Inter-chr q25.2 q14.1 116259 ChimerSeq ChiTaRs ChiTaRs BTN2A2-MAP1LC3A BTN2A2 chr6 26393654 MAP1LC3A chr20 33148001 Exonic hg19 NA BG996044 Out-of-frame Inter-chr p22.2 q11.22 116260 ChimerSeq ChiTaRs ChiTaRs SLC30A6-RASSF3 SLC30A6 chr2 32445511 RASSF3 chr12 65022252 Exonic hg19 NA AK000844 Out-of-frame Inter-chr p22.3 q14.2 Tumor suppressor gene 116261 ChimerSeq ChiTaRs ChiTaRs PCGF3-NCOA1 PCGF3 chr4 702753 NCOA1 chr2 24930064 Exonic hg19 NA BQ956364 Out-of-frame Inter-chr p16.3 p23.3 Oncogene Transcription factor 116262 ChimerSeq ChiTaRs ChiTaRs NCDN-RARG NCDN chr1 36028170 RARG chr12 53607847 Exonic hg19 NA BF829024 Out-of-frame Inter-chr p34.3 q13.13 Transcription factor 116263 ChimerSeq ChiTaRs ChiTaRs RERE-RERE RERE chr1 8414180 RERE chr1 8413468 Exonic hg19 NA BG910294 Out-of-frame Intra-chr p36.23 p36.23 116264 ChimerSeq ChiTaRs ChiTaRs EFNA5-RPS23 EFNA5 chr5 106714041 RPS23 chr5 81571295 Exonic hg19 NA AI982804 Out-of-frame Intra-chr q21.3 Tumor suppressor gene q14.2 116265 ChimerSeq ChiTaRs ChiTaRs EPB41-EPB41 EPB41 chr1 29438948 EPB41 chr1 29437793 Exonic hg19 NA BQ375294 Out-of-frame Intra-chr p35.3 Tumor suppressor gene p35.3 Tumor suppressor gene 116266 ChimerSeq ChiTaRs ChiTaRs SSBP3-SSBP3 SSBP3 chr1 54824899 SSBP3 chr1 54824409 Exonic hg19 NA BU678804 Out-of-frame Intra-chr p32.3 p32.3 116267 ChimerSeq ChiTaRs ChiTaRs MRPS22-CMPK1 MRPS22 chr3 139068439 CMPK1 chr1 47843702 Exonic hg19 NA AK027204 Out-of-frame Inter-chr q23 p33 Oncogene 116268 ChimerSeq ChiTaRs ChiTaRs DSP-DSP DSP chr6 7579788 DSP chr6 7578021 Exonic hg19 NA AL598124 Out-of-frame Intra-chr p24.3 Tumor suppressor gene p24.3 Tumor suppressor gene 116269 ChimerSeq ChiTaRs ChiTaRs PCBP1-PCBP1 PCBP1 chr2 70315799 PCBP1 chr2 70315318 Exonic hg19 NA BF898264 Out-of-frame Intra-chr p13.3 p13.3 116270 ChimerSeq ChiTaRs ChiTaRs PPP2R2A-PPP2R2A PPP2R2A chr8 25282682 PPP2R2A chr8 25282102 Exonic hg19 NA AL041184 Out-of-frame Intra-chr p21.2 p21.2 116271 ChimerSeq ChiTaRs ChiTaRs TOPBP1-TOPBP1 TOPBP1 chr3 133334075 TOPBP1 chr3 133332900 Exonic hg19 NA BQ025704 Out-of-frame Intra-chr q22.1 q22.1 116272 ChimerSeq ChiTaRs ChiTaRs SIGMAR1-VGLL3 SIGMAR1 chr9 34634810 VGLL3 chr3 87020419 Exonic hg19 NA BU754084 Out-of-frame Inter-chr p13.3 p12.1 116273 ChimerSeq ChiTaRs ChiTaRs EEF1G-TOX2 EEF1G chr11 62334914 TOX2 chr20 42697942 Exonic hg19 NA BP392614 Out-of-frame Inter-chr q12.3 q13.12 116274 ChimerSeq ChiTaRs ChiTaRs MRPS16-ADCY2 MRPS16 chr10 75010692 ADCY2 chr1 152005128 Exonic hg19 NA BQ014524 Out-of-frame Inter-chr q22.2 p15.31 116275 ChimerSeq ChiTaRs ChiTaRs KIAA1109-TMEM132D KIAA1109 chr4 123101194 TMEM132D chr12 130248898 Exonic hg19 NA BF951394 Out-of-frame Inter-chr q27 q24.33 116276 ChimerSeq ChiTaRs ChiTaRs ZNF608-SH3PXD2A ZNF608 chr5 123979230 SH3PXD2A chr10 105354871 Exonic hg19 NA BF854364 Out-of-frame Inter-chr q23.2 Transcription factor q24.33 116277 ChimerSeq ChiTaRs ChiTaRs SORBS2-PDLIM5 SORBS2 chr4 186517037 PDLIM5 chr4 95589273 Exonic hg19 NA BQ941394 Out-of-frame Intra-chr q35.1 q22.3 116278 ChimerSeq ChiTaRs ChiTaRs CCL21-GEMIN5 CCL21 chr9 34709139 GEMIN5 chr5 154267757 Exonic hg19 NA AI749414 Out-of-frame Inter-chr p13.3 q33.2 116279 ChimerSeq ChiTaRs ChiTaRs SEC61A2-SEC61A2 SEC61A2 chr10 12206405 SEC61A2 chr10 12206414 Exonic hg19 NA BU902594 Out-of-frame Intra-chr p14 p14 116280 ChimerSeq ChiTaRs ChiTaRs MRPS9-CD2AP MRPS9 chr2 105716411 CD2AP chr6 47594001 Exonic hg19 NA AW028914 Out-of-frame Inter-chr q12.1 p12.3 116281 ChimerSeq ChiTaRs ChiTaRs GDI1-TMEM181 GDI1 chrX 153670075 TMEM181 chr6 159056334 Exonic hg19 NA BI859574 Out-of-frame Inter-chr q28 q25.3 116282 ChimerSeq ChiTaRs ChiTaRs C3orf52-BAZ2B C3orf52 chr3 111812130 BAZ2B chr2 160480684 Exonic hg19 NA BF884724 Out-of-frame Inter-chr q13.2 q24.2 Transcription factor 116283 ChimerSeq ChiTaRs ChiTaRs KLC4-CTSS KLC4 chr6 43035030 CTSS chr1 150705375 Exonic hg19 NA BF858624 Out-of-frame Inter-chr p21.1 q21.3 116284 ChimerSeq ChiTaRs ChiTaRs SKAP2-INPP4B SKAP2 chr7 26813470 INPP4B chr4 143233000 Exonic hg19 NA BF895764 Out-of-frame Inter-chr p15.2 q31.21 Tumor suppressor gene 116285 ChimerSeq ChiTaRs ChiTaRs EFR3B-MBP EFR3B chr2 25297317 MBP chr18 74770527 Exonic hg19 NA AW515324 Out-of-frame Inter-chr p23.3 q23 116286 ChimerSeq ChiTaRs ChiTaRs CSNK1G3-HTN3 CSNK1G3 chr5 122937737 HTN3 chr4 70894176 Exonic hg19 NA AK129614 Out-of-frame Inter-chr q23.2 116287 ChimerSeq ChiTaRs ChiTaRs TPMT-PHACTR2 TPMT chr6 18130276 PHACTR2 chr6 144148681 Exonic hg19 NA BU608204 Out-of-frame Intra-chr p22.3 q24.2 116288 ChimerSeq ChiTaRs ChiTaRs KAZN-LLGL2 KAZN chr1 15071769 LLGL2 chr17 73570464 Exonic hg19 NA AI970394 Out-of-frame Inter-chr p36.21 q25.1 116289 ChimerSeq ChiTaRs ChiTaRs SH3BGRL3-IQGAP1 SH3BGRL3 chr1 26608013 IQGAP1 chr15 90934006 Exonic hg19 NA AI991234 3'UTR-CDS Inter-chr p36.11 q26.1 116290 ChimerSeq ChiTaRs ChiTaRs RBM6-FOXJ3 RBM6 chr3 50066920 FOXJ3 chr1 42643875 Exonic hg19 NA BF795594 Out-of-frame Inter-chr p21.31 Tumor suppressor gene p34.2 Transcription factor 116291 ChimerSeq ChiTaRs ChiTaRs HNRNPD-TMEM67 HNRNPD chr4 83275470 TMEM67 chr8 94828925 Exonic hg19 NA BG988244 Out-of-frame Inter-chr q21.22 q22.1 116292 ChimerSeq ChiTaRs ChiTaRs CCDC50-BIRC6 CCDC50 chr3 191089275 BIRC6 chr2 32731633 Exonic hg19 NA BF818564 Out-of-frame Inter-chr q28 p22.3 116293 ChimerSeq ChiTaRs ChiTaRs MCM2-MCM2 MCM2 chr3 127326229 MCM2 chr3 127327248 Exonic hg19 NA BG980024 Out-of-frame Intra-chr q21.3 q21.3 116294 ChimerSeq ChiTaRs ChiTaRs TRAK1-TRAK1 TRAK1 chr3 42254032 TRAK1 chr3 42254016 Exonic hg19 NA BG290364 Out-of-frame Intra-chr p22.1 p22.1 116295 ChimerSeq ChiTaRs ChiTaRs NUCKS1-NUCKS1 NUCKS1 chr1 205689673 NUCKS1 chr1 205689725 Exonic hg19 NA BQ774014 Out-of-frame Intra-chr q32.1 q32.1 116296 ChimerSeq ChiTaRs ChiTaRs TMSB10-BAIAP2 TMSB10 chr2 85133634 BAIAP2 chr17 79017689 Exonic hg19 NA BF845924 Out-of-frame Inter-chr p11.2 q25.3 116297 ChimerSeq ChiTaRs ChiTaRs CHI3L1-ESYT1 CHI3L1 chr1 203155390 ESYT1 chr12 56531348 Exonic hg19 NA BF898044 Out-of-frame Inter-chr q32.1 q13.2 116298 ChimerSeq ChiTaRs ChiTaRs CDK5RAP2-SLC7A8 CDK5RAP2 chr9 123171472 SLC7A8 chr14 23637276 Exonic hg19 NA BF926634 Out-of-frame Inter-chr q33.2 q11.2 116299 ChimerSeq ChiTaRs ChiTaRs PTP4A3-PTP4A3 PTP4A3 chr8 142437079 PTP4A3 chr8 142437898 Exonic hg19 NA BF988034 Out-of-frame Intra-chr q24.3 q24.3 116300 ChimerSeq ChiTaRs ChiTaRs BBOX1-FOS BBOX1 chr11 27089800 FOS chr14 75748601 Exonic hg19 NA AW798404 Out-of-frame Inter-chr p14.2 q24.3 Transcription factor 116301 ChimerSeq ChiTaRs ChiTaRs STMN1-STMN1 STMN1 chr1 26227293 STMN1 chr1 26227225 Exonic hg19 NA BQ774154 Out-of-frame Intra-chr p36.11 p36.11 116302 ChimerSeq ChiTaRs ChiTaRs NUCB2-NUCB2 NUCB2 chr11 17332468 NUCB2 chr11 17331141 Exonic hg19 NA BU674244 Out-of-frame Intra-chr p15.1 p15.1 116303 ChimerSeq ChiTaRs ChiTaRs EHF-ARHGAP10 EHF chr11 34682224 ARHGAP10 chr4 148970252 Exonic hg19 NA BG223444 Out-of-frame Inter-chr p13 Tumor suppressor gene Transcription factor q31.23 116304 ChimerSeq ChiTaRs ChiTaRs CD86-PROL1 CD86 chr3 121837661 PROL1 chr4 71272616 Exonic hg19 NA BF822274 Out-of-frame Inter-chr q13.33 116305 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-INS-IGF2 INS-IGF2 chr11 2159824 INS-IGF2 chr11 2151645 Exonic hg19 NA AK074614 Out-of-frame Intra-chr p15.5 p15.5 Oncogene 116306 ChimerSeq ChiTaRs ChiTaRs SEC24C-SEC24C SEC24C chr10 75531204 SEC24C chr10 75531211 Exonic hg19 NA BF815734 Out-of-frame Intra-chr q22.2 q22.2 116307 ChimerSeq ChiTaRs ChiTaRs FAM114A1-TBC1D2B FAM114A1 chr4 38947360 TBC1D2B chr15 78291238 Exonic hg19 NA BU753804 Out-of-frame Inter-chr p14 q25.1 116308 ChimerSeq ChiTaRs ChiTaRs HDAC9-MCMBP HDAC9 chr7 18556953 MCMBP chr10 121596307 Exonic hg19 NA BF837104 Out-of-frame Inter-chr p21.1 q26.11 116309 ChimerSeq ChiTaRs ChiTaRs CRTAP-MSRA CRTAP chr3 33184655 MSRA chr8 10021647 Exonic hg19 NA BQ447254 Out-of-frame Inter-chr p22.3 p23.1 116310 ChimerSeq ChiTaRs ChiTaRs PRRC2C-PRRC2C PRRC2C chr1 171501941 PRRC2C chr1 171509567 Exonic hg19 NA AI916384 Out-of-frame Intra-chr q24.3 q24.3 116311 ChimerSeq ChiTaRs ChiTaRs PNPT1-PNPT1 PNPT1 chr2 55906864 PNPT1 chr2 55894144 Exonic hg19 NA BQ335094 Out-of-frame Intra-chr p16.1 p16.1 116312 ChimerSeq ChiTaRs ChiTaRs TMEFF2-BBS9 TMEFF2 chr2 192915084 BBS9 chr7 33408652 Exonic hg19 NA AK130344 Out-of-frame Inter-chr q32.3 Tumor suppressor gene p14.3 116313 ChimerSeq ChiTaRs ChiTaRs TMEM50A-TMEM50A TMEM50A chr1 25687990 TMEM50A chr1 25688267 Exonic hg19 NA AW663344 Out-of-frame Intra-chr p36.11 p36.11 116314 ChimerSeq ChiTaRs ChiTaRs WBSCR22-WBSCR22 WBSCR22 chr7 73112321 WBSCR22 chr7 73112232 Exonic hg19 NA AW068214 Out-of-frame Intra-chr 116315 ChimerSeq ChiTaRs ChiTaRs CD59-RBPJ CD59 chr11 33743973 RBPJ chr4 26432077 Exonic hg19 NA BF997054 Out-of-frame Inter-chr p13 p15.2 Transcription factor 116316 ChimerSeq ChiTaRs ChiTaRs TOPBP1-VWA7 TOPBP1 chr3 133376933 VWA7 chr6 3075135 Exonic hg19 NA BG199994 Out-of-frame Inter-chr q22.1 116317 ChimerSeq ChiTaRs ChiTaRs ZRANB1-HSPA9 ZRANB1 chr10 126656269 HSPA9 chr5 137899374 Exonic hg19 NA BG993754 Out-of-frame Inter-chr q26.13 q31.2 116318 ChimerSeq ChiTaRs ChiTaRs FOXJ3-NECAP1 FOXJ3 chr1 42725855 NECAP1 chr12 8249272 Exonic hg19 NA BF826354 Out-of-frame Inter-chr p34.2 Transcription factor p13.31 116319 ChimerSeq ChiTaRs ChiTaRs TTC1-CDC42EP3 TTC1 chr5 159437728 CDC42EP3 chr2 37875774 Exonic hg19 NA BG995494 Out-of-frame Inter-chr q33.3 p22.2 116320 ChimerSeq ChiTaRs ChiTaRs MRPS21-DAP MRPS21 chr1 150266385 DAP chr5 10679364 Exonic hg19 NA BP392984 Out-of-frame Inter-chr q21.2 p15.2 116321 ChimerSeq ChiTaRs ChiTaRs DPYSL3-DPYSL3 DPYSL3 chr5 146770767 DPYSL3 chr5 146771080 Exonic hg19 NA BU617034 Out-of-frame Intra-chr q32 q32 116322 ChimerSeq ChiTaRs ChiTaRs OLFM1-OLFM1 OLFM1 chr9 138012312 OLFM1 chr9 138012309 Exonic hg19 NA BU079004 Out-of-frame Intra-chr q34.3 q34.3 116323 ChimerSeq ChiTaRs ChiTaRs ATP1A1-ATP1A1 ATP1A1 chr1 116931269 ATP1A1 chr1 116931539 Exonic hg19 NA BQ307354 Out-of-frame Intra-chr p13.1 p13.1 116324 ChimerSeq ChiTaRs ChiTaRs GOLGA4-GOLGA4 GOLGA4 chr3 37407738 GOLGA4 chr3 37369134 Exonic hg19 NA AW439904 Out-of-frame Intra-chr p22.2 p22.2 116325 ChimerSeq ChiTaRs ChiTaRs PRKDC-PRKDC PRKDC chr8 48686030 PRKDC chr8 48686011 Exonic hg19 NA AI961454 Out-of-frame Intra-chr q11.21 Oncogene q11.21 Oncogene 116326 ChimerSeq ChiTaRs ChiTaRs TRAPPC9-IKBKB TRAPPC9 chr8 141345003 IKBKB chr8 42181283 Exonic hg19 NA AW813634 Out-of-frame Intra-chr q24.3 p11.21 Oncogene 116327 ChimerSeq ChiTaRs ChiTaRs FMNL2-FMNL2 FMNL2 chr2 153330366 FMNL2 chr2 153287359 Exonic hg19 NA BG698704 Out-of-frame Intra-chr q23.3 q23.3 116328 ChimerSeq ChiTaRs ChiTaRs YBX1-NCBP2 YBX1 chr1 43148360 NCBP2 chr3 196663726 Exonic hg19 NA BU536214 Out-of-frame Inter-chr p34.2 Transcription factor q29 116329 ChimerSeq ChiTaRs ChiTaRs DSCC1-DSCC1 DSCC1 chr8 120863541 DSCC1 chr8 120862870 Exonic hg19 NA BG958494 Out-of-frame Intra-chr q24.12 q24.12 116330 ChimerSeq ChiTaRs ChiTaRs AP4M1-AP4M1 AP4M1 chr7 99706048 AP4M1 chr7 99704780 Exonic hg19 NA BU184274 Out-of-frame Intra-chr q22.1 q22.1 116331 ChimerSeq ChiTaRs ChiTaRs SGK223-SGK223 SGK223 chr8 8208153 SGK223 chr8 8209704 Exonic hg19 NA BE061114 Out-of-frame Intra-chr 116332 ChimerSeq ChiTaRs ChiTaRs PTMA-ATP6V0B PTMA chr2 232577591 ATP6V0B chr1 44443905 Exonic hg19 NA CN272094 Out-of-frame Inter-chr q37.1 p34.1 116333 ChimerSeq ChiTaRs ChiTaRs VEGFC-VEGFC VEGFC chr4 177691243 VEGFC chr4 177697934 Exonic hg19 NA N27674 Out-of-frame Intra-chr q34.3 q34.3 116334 ChimerSeq ChiTaRs ChiTaRs TRIP12-ADK TRIP12 chr2 230702588 ADK chr10 76101216 Exonic hg19 NA BX098414 Out-of-frame Inter-chr q36.3 q22.2 116335 ChimerSeq ChiTaRs ChiTaRs CAPN2-ZNF32-AS3 CAPN2 chr1 223934854 ZNF32-AS3 chr10 44139755 Exonic hg19 NA BE093114 Out-of-frame Inter-chr q41 q11.21 Transcription factor 116336 ChimerSeq ChiTaRs ChiTaRs RPS20-TLR9 RPS20 chr8 56987061 TLR9 chr3 52263719 Exonic hg19 NA BM051734 Out-of-frame Inter-chr q12.1 p21.2 116337 ChimerSeq ChiTaRs ChiTaRs CYBB-ADAM10 CYBB chrX 37670234 ADAM10 chr15 58901357 Exonic hg19 NA Z48614 Out-of-frame Inter-chr p21.1 q21.3 116338 ChimerSeq ChiTaRs ChiTaRs UBE2R2-KRT1 UBE2R2 chr9 33917123 KRT1 chr12 53068520 Exonic hg19 NA BC028294 Out-of-frame Inter-chr p13.3 q13.13 116339 ChimerSeq ChiTaRs ChiTaRs JAK1-JAK1 JAK1 chr1 65306348 JAK1 chr1 65322199 Exonic hg19 NA DB350514 Out-of-frame Intra-chr p31.3 TK:JakA Oncogene p31.3 TK:JakA Oncogene 116340 ChimerSeq ChiTaRs ChiTaRs LOC400955-CAPRIN2 LOC400955 chr2 58753007 CAPRIN2 chr12 30863247 Exonic hg19 NA BY798894 Out-of-frame Inter-chr p11.21 116341 ChimerSeq ChiTaRs ChiTaRs CDK9-CDK9 CDK9 chr9 130552324 CDK9 chr9 130552082 Exonic hg19 NA BF751344 Out-of-frame Intra-chr q34.11 CMGC:CDK q34.11 CMGC:CDK 116342 ChimerSeq ChiTaRs ChiTaRs MUC2-CKM MUC2 chr11 1078510 CKM chr19 45818743 Exonic hg19 NA DV080414 Out-of-frame Inter-chr q13.32 116343 ChimerSeq ChiTaRs ChiTaRs NBAS-EIF4G2 NBAS chr2 15607861 EIF4G2 chr11 10818828 Exonic hg19 NA BE088864 Out-of-frame Inter-chr p24.3 p15.4 116344 ChimerSeq ChiTaRs ChiTaRs UBAP1-UBAP1 UBAP1 chr9 34218049 UBAP1 chr9 34217441 Exonic hg19 NA AW891794 Out-of-frame Intra-chr p13.3 p13.3 116345 ChimerSeq ChiTaRs ChiTaRs DOCK5-DOCK5 DOCK5 chr8 25253198 DOCK5 chr8 25230160 Exonic hg19 NA BC057384 Out-of-frame Intra-chr p21.2 p21.2 116346 ChimerSeq ChiTaRs ChiTaRs LARS2-RAB3GAP2 LARS2 chr3 45887253 RAB3GAP2 chr1 220421317 Exonic hg19 NA AA905398 Out-of-frame Inter-chr p21.31 q41 116347 ChimerSeq ChiTaRs ChiTaRs NAV2-DGKA NAV2 chr11 19842188 DGKA chr12 56346920 Exonic hg19 NA BE717774 Out-of-frame Inter-chr p15.1 q13.2 116348 ChimerSeq ChiTaRs ChiTaRs GPM6B-ACTG1 GPM6B chrX 13791266 ACTG1 chr17 79476999 Exonic hg19 NA DB548164 Out-of-frame Inter-chr p22.2 q25.3 116349 ChimerSeq ChiTaRs ChiTaRs C4orf26-C4orf26 C4orf26 chr4 76489925 C4orf26 chr4 76489359 Exonic hg19 NA EB390424 Out-of-frame Intra-chr q21.1 q21.1 116350 ChimerSeq ChiTaRs ChiTaRs AMOTL2-ADD3 AMOTL2 chr3 134075089 ADD3 chr10 111893426 Exonic hg19 NA C16484 Out-of-frame Inter-chr q22.2 q25.1 116351 ChimerSeq ChiTaRs ChiTaRs CCNB1-CCDC84 CCNB1 chr5 68471329 CCDC84 chr11 118869722 Exonic hg19 NA AW855254 Out-of-frame Inter-chr q13.2 116352 ChimerSeq ChiTaRs ChiTaRs LOC100506474-COL1A2 LOC100506474 chr2 13134668 COL1A2 chr7 94060307 Exonic hg19 NA N22134 Out-of-frame Inter-chr q21.3 116353 ChimerSeq ChiTaRs ChiTaRs DHDDS-SEC24C DHDDS chr1 26766321 SEC24C chr10 75521175 Exonic hg19 NA BI049604 Out-of-frame Inter-chr p36.11 q22.2 116354 ChimerSeq ChiTaRs ChiTaRs FAM219A-ISLR FAM219A chr9 34426811 ISLR chr15 74468270 Exonic hg19 NA BE707994 Out-of-frame Inter-chr p13.3 q24.1 116355 ChimerSeq ChiTaRs ChiTaRs ESYT2-PPIA ESYT2 chr7 158622163 PPIA chr7 44839045 Exonic hg19 NA BC001224 Out-of-frame Intra-chr q36.3 p13 116356 ChimerSeq ChiTaRs ChiTaRs ASAP1-MDGA2 ASAP1 chr8 131065893 MDGA2 chr14 48091643 Exonic hg19 NA BE699544 Out-of-frame Inter-chr q24.22 q21.3 116357 ChimerSeq ChiTaRs ChiTaRs SUCLG1-SUCLG1 SUCLG1 chr2 84652664 SUCLG1 chr2 84658640 Exonic hg19 NA BM968054 Out-of-frame Intra-chr p11.2 p11.2 116358 ChimerSeq ChiTaRs ChiTaRs AP2M1-AP2M1 AP2M1 chr3 183901879 AP2M1 chr3 183901388 Exonic hg19 NA BM690684 3'UTR-CDS Intra-chr q27.1 q27.1 116359 ChimerSeq ChiTaRs ChiTaRs HECW1-HECW1 HECW1 chr7 43581597 HECW1 chr7 43495894 Exonic hg19 NA AW895684 Out-of-frame Intra-chr p14.1 p14.1 116360 ChimerSeq ChiTaRs ChiTaRs UTRN-UTRN UTRN chr6 144838011 UTRN chr6 144854221 Exonic hg19 NA BF086464 Out-of-frame Intra-chr q24.2 q24.2 116361 ChimerSeq ChiTaRs ChiTaRs NT5C2-SHOC2 NT5C2 chr10 104953029 SHOC2 chr10 112723882 Exonic hg19 NA DA677984 5'UTR-5'UTR Intra-chr q24.33 q25.2 116362 ChimerSeq ChiTaRs ChiTaRs WWC1-TRAF3IP3 WWC1 chr5 167769263 TRAF3IP3 chr1 209953049 Exonic hg19 NA BE717054 Out-of-frame Inter-chr q34 q32.2 116363 ChimerSeq ChiTaRs ChiTaRs NKAIN2-MYOT NKAIN2 chr6 124303917 MYOT chr5 137088370 Exonic hg19 NA R15394 Out-of-frame Inter-chr q22.31 q31.2 116364 ChimerSeq ChiTaRs ChiTaRs BRAF-BRAF BRAF chr7 140610025 BRAF chr7 140610125 Exonic hg19 NA AW860004 Out-of-frame Intra-chr q34 TKL:RAF Oncogene q34 TKL:RAF Oncogene 116365 ChimerSeq ChiTaRs ChiTaRs HIST1H2AJ-HMG20B HIST1H2AJ chr6 27782555 HMG20B chr19 3572994 Exonic hg19 NA DA559284 Out-of-frame Inter-chr p22.1 p13.3 Transcription factor 116366 ChimerSeq ChiTaRs ChiTaRs MYO1B-NIPAL3 MYO1B chr2 192261681 NIPAL3 chr1 24785355 Exonic hg19 NA BE819004 Out-of-frame Inter-chr q32.3 p36.11 116367 ChimerSeq ChiTaRs ChiTaRs ACTR3-KDM3A ACTR3 chr2 114685026 KDM3A chr2 86687147 Exonic hg19 NA BE695584 Out-of-frame Intra-chr q14.1 p11.2 Tumor suppressor gene 116368 ChimerSeq ChiTaRs ChiTaRs IARS-RAD54L2 IARS chr9 95054808 RAD54L2 chr3 51583284 Exonic hg19 NA BF360044 Out-of-frame Inter-chr q22.31 p21.2 116369 ChimerSeq ChiTaRs ChiTaRs NAA38-NAA38 NAA38 chr7 117831471 NAA38 chr7 117830796 Exonic hg19 NA DW466314 Out-of-frame Intra-chr p13.1 p13.1 116370 ChimerSeq ChiTaRs ChiTaRs JAK2-TMEM159 JAK2 chr9 4987758 TMEM159 chr16 21187258 Exonic hg19 NA CN414364 Out-of-frame Inter-chr p24.1 TK:JakA Oncogene 116371 ChimerSeq ChiTaRs ChiTaRs GEMIN5-TACC1 GEMIN5 chr5 154312179 TACC1 chr8 38598521 Exonic hg19 NA BF445444 Out-of-frame Inter-chr q33.2 p11.22 116372 ChimerSeq ChiTaRs ChiTaRs HMGCL-HMGCL HMGCL chr1 24130950 HMGCL chr1 24128619 Exonic hg19 NA BF749404 Out-of-frame Intra-chr p36.11 p36.11 116373 ChimerSeq ChiTaRs ChiTaRs OGDH-OGDH OGDH chr7 44676838 OGDH chr7 44676616 Exonic hg19 NA BE164304 Out-of-frame Intra-chr p13 p13 116374 ChimerSeq ChiTaRs ChiTaRs BRD9-DGKD BRD9 chr5 863953 DGKD chr2 234373392 Exonic hg19 NA BM150804 Out-of-frame Inter-chr p15.33 116375 ChimerSeq ChiTaRs ChiTaRs ACSL6-ACSL6 ACSL6 chr5 131325201 ACSL6 chr5 131323885 Exonic hg19 NA BE766684 Out-of-frame Intra-chr q31.1 q31.1 116376 ChimerSeq ChiTaRs ChiTaRs AMD1-AMD1 AMD1 chr6 111210185 AMD1 chr6 111214224 Exonic hg19 NA BE181974 Out-of-frame Intra-chr q21 q21 116377 ChimerSeq ChiTaRs ChiTaRs DPP6-DPP6 DPP6 chr7 154684663 DPP6 chr7 154684659 Exonic hg19 NA BF348324 Out-of-frame Intra-chr 116378 ChimerSeq ChiTaRs ChiTaRs LAMC2-LAMC2 LAMC2 chr1 183212868 LAMC2 chr1 183212871 Exonic hg19 NA BE712704 Out-of-frame Intra-chr q25.3 q25.3 116379 ChimerSeq ChiTaRs ChiTaRs GIGYF2-GIGYF2 GIGYF2 chr2 233721558 GIGYF2 chr2 233721543 Exonic hg19 NA BE873294 Out-of-frame Intra-chr q37.1 q37.1 116380 ChimerSeq ChiTaRs ChiTaRs GDA-DGKH GDA chr9 74822665 DGKH chr13 42774590 Exonic hg19 NA AW818534 Out-of-frame Inter-chr q21.13 q14.11 116381 ChimerSeq ChiTaRs ChiTaRs KCMF1-KCMF1 KCMF1 chr2 85280895 KCMF1 chr2 85280455 Exonic hg19 NA CB241984 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Transcription factor 116382 ChimerSeq ChiTaRs ChiTaRs ZBTB7B-CLSTN2 ZBTB7B chr1 154982650 CLSTN2 chr3 139932471 Exonic hg19 NA AW998044 Out-of-frame Inter-chr q21.3 Transcription factor q23 116383 ChimerSeq ChiTaRs ChiTaRs ACTB-CBX5 ACTB chr7 5570190 CBX5 chr12 54624817 Exonic hg19 NA DA184434 Out-of-frame Inter-chr p22.1 q13.13 Tumor suppressor gene 116384 ChimerSeq ChiTaRs ChiTaRs CD84-TRIM39 CD84 chr1 160534608 TRIM39 chr6 1640346 Exonic hg19 NA BE552054 Out-of-frame Inter-chr q23.3 116385 ChimerSeq ChiTaRs ChiTaRs NOP16-GAPDHS NOP16 chr5 175815599 GAPDHS chr19 36034287 Exonic hg19 NA DB108304 Out-of-frame Inter-chr q35.2 q13.12 116386 ChimerSeq ChiTaRs ChiTaRs GUK1-GUK1 GUK1 chr1 228336409 GUK1 chr1 228328849 Exonic hg19 NA BF766114 Out-of-frame Intra-chr q42.13 q42.13 116387 ChimerSeq ChiTaRs ChiTaRs CADM2-CADM2 CADM2 chr3 85065347 CADM2 chr3 85065219 Exonic hg19 NA AW898064 Out-of-frame Intra-chr p12.1 Tumor suppressor gene p12.1 Tumor suppressor gene 116388 ChimerSeq ChiTaRs ChiTaRs CLINT1-CLINT1 CLINT1 chr5 157270382 CLINT1 chr5 157269494 Exonic hg19 NA AW993884 Out-of-frame Intra-chr q33.3 q33.3 116389 ChimerSeq ChiTaRs ChiTaRs SP110-SP110 SP110 chr2 231050762 SP110 chr2 231050718 Exonic hg19 NA BF511614 Out-of-frame Intra-chr q37.1 Transcription factor q37.1 Transcription factor 116390 ChimerSeq ChiTaRs ChiTaRs IL20RA-ATP6V0E2 IL20RA chr6 137322814 ATP6V0E2 chr7 149576580 Exonic hg19 NA BE645384 Out-of-frame Inter-chr q23.3 q36.1 116391 ChimerSeq ChiTaRs ChiTaRs VIL1-VIL1 VIL1 chr2 219305528 VIL1 chr2 219305552 Exonic hg19 NA BE512894 Out-of-frame Intra-chr q35 Tumor suppressor gene q35 Tumor suppressor gene 116392 ChimerSeq ChiTaRs ChiTaRs MLL3-MLL3 MLL3 chr7 151832344 MLL3 chr7 151832312 Exonic hg19 NA CA310844 Out-of-frame Intra-chr Tumor suppressor gene Tumor suppressor gene 116393 ChimerSeq ChiTaRs ChiTaRs C1orf101-C1orf101 C1orf101 chr1 244724250 C1orf101 chr1 244724247 Exonic hg19 NA DN998404 Out-of-frame Intra-chr 116394 ChimerSeq ChiTaRs ChiTaRs LOC728190-DIXDC1 LOC728190 chr10 89102221 DIXDC1 chr11 111887413 Exonic hg19 NA DA210964 Out-of-frame Inter-chr q23.1 116395 ChimerSeq ChiTaRs ChiTaRs RPRD2-MEF2C RPRD2 chr1 150390202 MEF2C chr5 88047672 Exonic hg19 NA DA941474 Out-of-frame Inter-chr q21.2 q14.3 Transcription factor 116396 ChimerSeq ChiTaRs ChiTaRs SF3B1-SF3B1 SF3B1 chr2 198266167 SF3B1 chr2 198266175 Exonic hg19 NA BE166344 Out-of-frame Intra-chr q33.1 Oncogene q33.1 Oncogene 116397 ChimerSeq ChiTaRs ChiTaRs ATP8A1-LIPC ATP8A1 chr4 42437539 LIPC chr15 58856857 Exonic hg19 NA T89564 Out-of-frame Inter-chr p13 q21.3 116398 ChimerSeq ChiTaRs ChiTaRs RPS4X-RPS4X RPS4X chrX 71493219 RPS4X chrX 71494951 Exonic hg19 NA BF326184 Out-of-frame Intra-chr q13.1 q13.1 116399 ChimerSeq ChiTaRs ChiTaRs XPNPEP1-ABCC1 XPNPEP1 chr10 111662810 ABCC1 chr16 16061627 Exonic hg19 NA AW993064 Out-of-frame Inter-chr q25.1 116400 ChimerSeq ChiTaRs ChiTaRs PTAR1-PARD3 PTAR1 chr9 72339942 PARD3 chr10 34873937 Exonic hg19 NA AW847384 Out-of-frame Inter-chr q21.12 p11.21 116401 ChimerSeq ChiTaRs ChiTaRs SORBS1-SORBS1 SORBS1 chr10 97149504 SORBS1 chr10 97146004 Exonic hg19 NA CA336984 Out-of-frame Intra-chr q24.1 q24.1 116402 ChimerSeq ChiTaRs ChiTaRs LRRC8A-C17orf80 LRRC8A chr9 131679171 C17orf80 chr17 71244933 Exonic hg19 NA DR978214 Out-of-frame Inter-chr q34.11 q25.1 116403 ChimerSeq ChiTaRs ChiTaRs MSN-KAZN MSN chrX 64941655 KAZN chr1 14937006 Exonic hg19 NA AW963054 Out-of-frame Inter-chr q12 p36.21 116404 ChimerSeq ChiTaRs ChiTaRs UBE2D3-NRF1 UBE2D3 chr4 103717350 NRF1 chr7 129269870 Exonic hg19 NA CV341784 Out-of-frame Inter-chr q24 q32.2 Tumor suppressor gene Transcription factor 116405 ChimerSeq ChiTaRs ChiTaRs GOLGA2-ABCA8 GOLGA2 chr9 131018660 ABCA8 chr17 66913126 Exonic hg19 NA BI049704 Out-of-frame Inter-chr q34.11 q24.2 116406 ChimerSeq ChiTaRs ChiTaRs PEX11B-DNAJC11 PEX11B chr1 145516456 DNAJC11 chr1 6698352 Exonic hg19 NA BF664414 Out-of-frame Intra-chr q21.1 p36.31 Tumor suppressor gene 116407 ChimerSeq ChiTaRs ChiTaRs MRPL14-CNPY2 MRPL14 chr6 44081927 CNPY2 chr12 56705073 Exonic hg19 NA CN305374 Out-of-frame Inter-chr p21.1 q13.3 116408 ChimerSeq ChiTaRs ChiTaRs PCYOX1-CEL PCYOX1 chr2 70504008 CEL chr9 135937365 Exonic hg19 NA M54994 Out-of-frame Inter-chr p13.3 q34.13 116409 ChimerSeq ChiTaRs ChiTaRs PLXNA4-IFNGR2 PLXNA4 chr7 131829610 IFNGR2 chr21 34799386 Exonic hg19 NA BE837564 Out-of-frame Inter-chr q32.3 116410 ChimerSeq ChiTaRs ChiTaRs MAP3K7-MAP3K7 MAP3K7 chr6 91269900 MAP3K7 chr6 91269884 Exonic hg19 NA BF082284 Out-of-frame Intra-chr q15 STE:STE11 Oncogene q15 STE:STE11 Oncogene 116411 ChimerSeq ChiTaRs ChiTaRs RNF216-RNF216 RNF216 chr7 5774997 RNF216 chr7 5781547 Exonic hg19 NA DA646524 Out-of-frame Intra-chr p22.1 p22.1 116412 ChimerSeq ChiTaRs ChiTaRs MIR548N-MIR548N MIR548N chr2 179435487 MIR548N chr2 179435166 Exonic hg19 NA BF750194 Out-of-frame Intra-chr p14.2 p14.2 116413 ChimerSeq ChiTaRs ChiTaRs FANCL-FANCL FANCL chr2 58459250 FANCL chr2 58425728 Exonic hg19 NA BE694274 Out-of-frame Intra-chr p16.1 p16.1 116414 ChimerSeq ChiTaRs ChiTaRs ARID1B-RAPGEF4 ARID1B chr6 157301948 RAPGEF4 chr2 173765015 Exonic hg19 NA BF762844 Out-of-frame Inter-chr q25.3 Oncogene q31.1 116415 ChimerSeq ChiTaRs ChiTaRs MYT1L-CAMTA1 MYT1L chr2 2040816 CAMTA1 chr1 7697021 Exonic hg19 NA BX090934 Out-of-frame Inter-chr p25.3 Transcription factor p36.31 Tumor suppressor gene Transcription factor 116416 ChimerSeq ChiTaRs ChiTaRs SNED1-SNED1 SNED1 chr2 241971533 SNED1 chr2 241970787 Exonic hg19 NA BF203794 Out-of-frame Intra-chr q37.3 q37.3 116417 ChimerSeq ChiTaRs ChiTaRs SFTPB-NFKBIZ SFTPB chr2 85888215 NFKBIZ chr3 101575178 Exonic hg19 NA BF358274 Out-of-frame Inter-chr p11.2 q12.3 116418 ChimerSeq ChiTaRs ChiTaRs G6PD-G6PD G6PD chrX 153759659 G6PD chrX 153759955 Exonic hg19 NA BM688674 Out-of-frame Intra-chr q28 Oncogene q28 Oncogene 116419 ChimerSeq ChiTaRs ChiTaRs NCKAP5-SLIT3 NCKAP5 chr2 134193555 SLIT3 chr5 168576989 Exonic hg19 NA CV413004 Out-of-frame Inter-chr q21.2 q35.1 116420 ChimerSeq ChiTaRs ChiTaRs DLG1-LPP DLG1 chr3 196846404 LPP chr3 188327551 Exonic hg19 NA BF155584 Out-of-frame Intra-chr q29 Tumor suppressor gene q27.3 Oncogene 116421 ChimerSeq ChiTaRs ChiTaRs RNU5F-1-SLC1A2 RNU5F-1 chr1 220253908 SLC1A2 chr11 35272802 Exonic hg19 NA AW902064 Out-of-frame Inter-chr p34.1 p13 116422 ChimerSeq ChiTaRs ChiTaRs GRPEL2-GRPEL2 GRPEL2 chr5 148733669 GRPEL2 chr5 148733855 Exonic hg19 NA N40724 Out-of-frame Intra-chr q32 q32 116423 ChimerSeq ChiTaRs ChiTaRs IGFBP2-DNMT3L IGFBP2 chr2 217529159 DNMT3L chr21 45671006 Exonic hg19 NA BF222724 Out-of-frame Inter-chr q35 q22.3 116424 ChimerSeq ChiTaRs ChiTaRs CTNNA1-CTNNA1 CTNNA1 chr5 138269517 CTNNA1 chr5 138269598 Exonic hg19 NA BF760314 Out-of-frame Intra-chr q31.2 Oncogene q31.2 Oncogene 116425 ChimerSeq ChiTaRs ChiTaRs ADCY2-TNKS2 ADCY2 chr1 152005124 TNKS2 chr10 93623131 Exonic hg19 NA DB313344 Out-of-frame Inter-chr p15.31 q23.32 116426 ChimerSeq ChiTaRs ChiTaRs WDR77-HERPUD1 WDR77 chr1 111990072 HERPUD1 chr16 56976109 Exonic hg19 NA BE312794 Out-of-frame Inter-chr p13.2 q13 116427 ChimerSeq ChiTaRs ChiTaRs PPP1R35-ANKRD19P PPP1R35 chr7 100036127 ANKRD19P chr9 95599736 Exonic hg19 NA DA292134 Out-of-frame Inter-chr q22.1 q22.31 116428 ChimerSeq ChiTaRs ChiTaRs ID3-ID3 ID3 chr1 23885988 ID3 chr1 23884842 Exonic hg19 NA T78784 Out-of-frame Intra-chr 116429 ChimerSeq ChiTaRs ChiTaRs CCAR1-CCAR1 CCAR1 chr10 70532797 CCAR1 chr10 70525633 Exonic hg19 NA BF216494 Out-of-frame Intra-chr q21.3 Tumor suppressor gene q21.3 Tumor suppressor gene 116430 ChimerSeq ChiTaRs ChiTaRs PAPPA-INPP5A PAPPA chr9 119126800 INPP5A chr10 134410696 Exonic hg19 NA BF368694 Out-of-frame Inter-chr q33.1 q26.3 116431 ChimerSeq ChiTaRs ChiTaRs FUCA2-SSR2 FUCA2 chr6 143823381 SSR2 chr1 155979271 Exonic hg19 NA BE837584 Out-of-frame Inter-chr q24.2 q22 116432 ChimerSeq ChiTaRs ChiTaRs DAB2-DAB2 DAB2 chr5 39414477 DAB2 chr5 39417693 Exonic hg19 NA DA569334 Out-of-frame Intra-chr p13.1 Tumor suppressor gene p13.1 Tumor suppressor gene 116433 ChimerSeq ChiTaRs ChiTaRs PINK1-PINK1 PINK1 chr1 20966484 PINK1 chr1 20964579 Exonic hg19 NA T08564 Out-of-frame Intra-chr p36.12 Other:NKF2 p36.12 Other:NKF2 116434 ChimerSeq ChiTaRs ChiTaRs PRKAG2-MALAT1 PRKAG2 chr7 151257549 MALAT1 chr11 65266740 Exonic hg19 NA BE763984 Out-of-frame Inter-chr q36.1 q13.1 116435 ChimerSeq ChiTaRs ChiTaRs ALS2CR12-LRPPRC ALS2CR12 chr2 202156324 LRPPRC chr2 44115367 Exonic hg19 NA BF735164 Out-of-frame Intra-chr q33.1 p21 116436 ChimerSeq ChiTaRs ChiTaRs TFG-TRPC5 TFG chr3 100467300 TRPC5 chrX 111289008 Exonic hg19 NA T05994 Out-of-frame Inter-chr q12.2 q23 116437 ChimerSeq ChiTaRs ChiTaRs GMDS-TLE1 GMDS chr6 1860984 TLE1 chr9 84253459 Exonic hg19 NA BE002314 Out-of-frame Inter-chr p25.3 q21.32 116438 ChimerSeq ChiTaRs ChiTaRs CADM2-CADM2 CADM2 chr3 85065343 CADM2 chr3 85065219 Exonic hg19 NA AW898054 Out-of-frame Intra-chr p12.1 Tumor suppressor gene p12.1 Tumor suppressor gene 116439 ChimerSeq ChiTaRs ChiTaRs SZT2-SZT2 SZT2 chr1 43910479 SZT2 chr1 43909653 Exonic hg19 NA BF377264 Out-of-frame Intra-chr p34.2 p34.2 116440 ChimerSeq ChiTaRs ChiTaRs ODC1-ODC1 ODC1 chr2 10582225 ODC1 chr2 10580763 Exonic hg19 NA BM794694 Out-of-frame Intra-chr p25.1 p25.1 116441 ChimerSeq ChiTaRs ChiTaRs CAST-NEK11 CAST chr5 96089866 NEK11 chr3 131069057 Exonic hg19 NA AW995804 Out-of-frame Inter-chr q15 q22.1 Other:NEK 116442 ChimerSeq ChiTaRs ChiTaRs GPR161-ZNF462 GPR161 chr1 168054658 ZNF462 chr9 109688302 Exonic hg19 NA CB218114 Out-of-frame Inter-chr q24.2 q31.2 Transcription factor 116443 ChimerSeq ChiTaRs ChiTaRs IDS-LOC100131434 IDS chrX 148577934 LOC100131434 chrX 148615706 Exonic hg19 NA U66054 Out-of-frame Intra-chr q28 116444 ChimerSeq ChiTaRs ChiTaRs RCC1-RCC1 RCC1 chr1 28848885 RCC1 chr1 28858087 Exonic hg19 NA BF094114 Out-of-frame Intra-chr p35.3 p35.3 116445 ChimerSeq ChiTaRs ChiTaRs LOC100507053-LOC100507053 LOC100507053 chr4 100077171 LOC100507053 chr4 100077188 Exonic hg19 NA BE087444 Out-of-frame Intra-chr 116446 ChimerSeq ChiTaRs ChiTaRs FOXP2-FOXP2 FOXP2 chr7 113735310 FOXP2 chr7 113735323 Exonic hg19 NA CV410554 Out-of-frame Intra-chr q31.1 Transcription factor q31.1 Transcription factor 116447 ChimerSeq ChiTaRs ChiTaRs SOX2-OT-TMEM144 SOX2-OT chr3 181431290 TMEM144 chr4 159176248 Exonic hg19 NA CN414214 Out-of-frame Inter-chr q26.33 Oncogene Transcription factor q32.1 116448 ChimerSeq ChiTaRs ChiTaRs PEG10-PEG10 PEG10 chr7 94296714 PEG10 chr7 94296388 Exonic hg19 NA BE178954 Out-of-frame Intra-chr q21.3 q21.3 116449 ChimerSeq ChiTaRs ChiTaRs HIGD2A-DPYSL5 HIGD2A chr5 175816760 DPYSL5 chr2 27170761 Exonic hg19 NA H72334 Out-of-frame Inter-chr q35.2 p23.3 116450 ChimerSeq ChiTaRs ChiTaRs DAPK1-MAMDC2 DAPK1 chr9 90260886 MAMDC2 chr9 72832516 Exonic hg19 NA BC003614 Out-of-frame Intra-chr q21.33 CAMK:DAPK Tumor suppressor gene q21.12 116451 ChimerSeq ChiTaRs ChiTaRs RCAN2-FAF1 RCAN2 chr6 46315081 FAF1 chr1 50922968 Exonic hg19 NA BI035294 Out-of-frame Inter-chr p12.3 p32.3 116452 ChimerSeq ChiTaRs ChiTaRs FAM171B-FAM171B FAM171B chr2 187589798 FAM171B chr2 187585044 Exonic hg19 NA CD237934 Out-of-frame Intra-chr q32.1 q32.1 116453 ChimerSeq ChiTaRs ChiTaRs MCM3-FOXP4 MCM3 chr6 52149545 FOXP4 chr6 41567150 Exonic hg19 NA BP227044 Out-of-frame Intra-chr p12.2 p21.1 Oncogene Transcription factor 116454 ChimerSeq ChiTaRs ChiTaRs PAPPA-PAPPA PAPPA chr9 119099490 PAPPA chr9 118989791 Exonic hg19 NA BP320564 Out-of-frame Intra-chr q33.1 q33.1 116455 ChimerSeq ChiTaRs ChiTaRs LOC645513-KIAA1257 LOC645513 chr4 120550146 KIAA1257 chr3 128699453 Exonic hg19 NA D89094 Out-of-frame Inter-chr q21.3 116456 ChimerSeq ChiTaRs ChiTaRs RPS4X-ZNF24 RPS4X chrX 71492563 ZNF24 chr18 32920252 Exonic hg19 NA H21354 Out-of-frame Inter-chr q13.1 q12.2 Transcription factor 116457 ChimerSeq ChiTaRs ChiTaRs GNB2L1-NFXL1 GNB2L1 chr5 180666153 NFXL1 chr4 47850321 Exonic hg19 NA DB326444 Out-of-frame Inter-chr Tumor suppressor gene p12 Transcription factor 116458 ChimerSeq ChiTaRs ChiTaRs CELSR2-CALM3 CELSR2 chr1 109818153 CALM3 chr19 47112215 Exonic hg19 NA AW895034 Out-of-frame Inter-chr p13.3 q13.32 116459 ChimerSeq ChiTaRs ChiTaRs C5orf15-PRKAA1 C5orf15 chr5 133292101 PRKAA1 chr5 40760954 Exonic hg19 NA BE002414 Out-of-frame Intra-chr q31.1 p13.1 Tumor suppressor gene 116460 ChimerSeq ChiTaRs ChiTaRs RPL7A-RDX RPL7A chr9 136218281 RDX chr11 110128554 Exonic hg19 NA BC012174 Out-of-frame Inter-chr q22.3 116461 ChimerSeq ChiTaRs ChiTaRs EPHA6-ZNF207 EPHA6 chr3 97437956 ZNF207 chr17 30678873 Exonic hg19 NA DA718594 Out-of-frame Inter-chr q11.2 q11.2 Transcription factor 116462 ChimerSeq ChiTaRs ChiTaRs PRKAB2-ERG PRKAB2 chr1 146636957 ERG chr21 39768753 Exonic hg19 NA BX482434 Out-of-frame Inter-chr q21.1 q22.2 Oncogene Transcription factor 116463 ChimerSeq ChiTaRs ChiTaRs PSMB7-ZFP36 PSMB7 chr9 127115955 ZFP36 chr19 39899603 Exonic hg19 NA BM990034 Out-of-frame Inter-chr q33.3 q13.2 Tumor suppressor gene 116464 ChimerSeq ChiTaRs ChiTaRs C10orf88-CMC2 C10orf88 chr10 124691379 CMC2 chr16 81009897 Exonic hg19 NA BE765374 Out-of-frame Inter-chr q26.13 q23.2 116465 ChimerSeq ChiTaRs ChiTaRs ITGB8-LOC440600 ITGB8 chr7 20454446 LOC440600 chr1 110836716 Exonic hg19 NA AW994814 Out-of-frame Inter-chr p21.1 116466 ChimerSeq ChiTaRs ChiTaRs CLASP1-C1orf95 CLASP1 chr2 122097023 C1orf95 chr1 226796644 Exonic hg19 NA CB156734 Out-of-frame Inter-chr q14.3 116467 ChimerSeq ChiTaRs ChiTaRs HPGD-HPGD HPGD chr4 175443619 HPGD chr4 175411745 Exonic hg19 NA J05594 Out-of-frame Intra-chr q34.1 Tumor suppressor gene q34.1 Tumor suppressor gene 116468 ChimerSeq ChiTaRs ChiTaRs MAP4K4-PPM1A MAP4K4 chr2 102508496 PPM1A chr14 60764464 Exonic hg19 NA BF435544 Out-of-frame Inter-chr q11.2 q23.1 Tumor suppressor gene 116469 ChimerSeq ChiTaRs ChiTaRs PHF15-SEC31A PHF15 chr5 133860179 SEC31A chr4 83799883 Exonic hg19 NA DB231724 Out-of-frame Inter-chr q21.22 116470 ChimerSeq ChiTaRs ChiTaRs RPL7A-NTRK1 RPL7A chr9 136215897 NTRK1 chr1 156844362 Exonic hg19 NA X06704 In-Frame Inter-chr q23.1 Oncogene 116471 ChimerSeq ChiTaRs ChiTaRs MLLT3-MLL MLLT3 chr9 20358270 MLL chr11 118354734 Exonic hg19 NA AY282403 Out-of-frame Inter-chr p21.3 q23.3 116472 ChimerSeq ChiTaRs ChiTaRs CPB1-CPB1 CPB1 chr3 148563073 CPB1 chr3 148545596 Exonic hg19 NA BP325294 Out-of-frame Intra-chr q24 q24 116473 ChimerSeq ChiTaRs ChiTaRs LOC441242-TPM2 LOC441242 chr7 65157476 TPM2 chr9 35683165 Exonic hg19 NA BI047044 Out-of-frame Inter-chr p13.3 116474 ChimerSeq ChiTaRs ChiTaRs PFKFB2-PFKFB2 PFKFB2 chr1 207236753 PFKFB2 chr1 207242791 Exonic hg19 NA W27604 Out-of-frame Intra-chr q32.1 q32.1 116475 ChimerSeq ChiTaRs ChiTaRs ALDH1A1-ALDH1A1 ALDH1A1 chr9 75567934 ALDH1A1 chr9 75540406 Exonic hg19 NA DA896624 Out-of-frame Intra-chr q21.13 q21.13 116476 ChimerSeq ChiTaRs ChiTaRs TMEM2-TMEM2 TMEM2 chr9 74298655 TMEM2 chr9 74299493 Exonic hg19 NA N93124 Out-of-frame Intra-chr q21.13 q21.13 116477 ChimerSeq ChiTaRs ChiTaRs GNB1-RPL24 GNB1 chr1 1756884 RPL24 chr3 101404661 Exonic hg19 NA BE386644 In-Frame Inter-chr p36.33 q12.3 116478 ChimerSeq ChiTaRs ChiTaRs FAM117B-TCEANC2 FAM117B chr2 203542532 TCEANC2 chr1 54564832 Exonic hg19 NA BE466904 Out-of-frame Inter-chr q33.2 p32.3 116479 ChimerSeq ChiTaRs ChiTaRs KIAA2026-C2orf74 KIAA2026 chr9 5968368 C2orf74 chr2 61391744 Exonic hg19 NA BC108654 Out-of-frame Inter-chr p24.1 p15 116480 ChimerSeq ChiTaRs ChiTaRs BAI3-ALOXE3 BAI3 chr6 69582199 ALOXE3 chr17 8021569 Exonic hg19 NA DA096644 Out-of-frame Inter-chr p13.1 116481 ChimerSeq ChiTaRs ChiTaRs BTBD9-DNASE1L3 BTBD9 chr6 38185777 DNASE1L3 chr3 58178328 Exonic hg19 NA U75744 Out-of-frame Inter-chr p21.2 p14.3 116482 ChimerSeq ChiTaRs ChiTaRs DFFA-DFFA DFFA chr1 10523625 DFFA chr1 10523622 Exonic hg19 NA BF203854 Out-of-frame Intra-chr p36.22 Tumor suppressor gene p36.22 Tumor suppressor gene 116483 ChimerSeq ChiTaRs ChiTaRs FADS1-VGLL3 FADS1 chr11 61569808 VGLL3 chr3 86994531 Exonic hg19 NA N67724 Out-of-frame Inter-chr q12.2 p12.1 116484 ChimerSeq ChiTaRs ChiTaRs PUM1-PUM1 PUM1 chr1 31404636 PUM1 chr1 31404644 Exonic hg19 NA CB243224 Out-of-frame Intra-chr p35.2 p35.2 116485 ChimerSeq ChiTaRs ChiTaRs DAGLB-DAGLB DAGLB chr7 6500918 DAGLB chr7 6500927 Exonic hg19 NA BE857164 Out-of-frame Intra-chr p22.1 p22.1 116486 ChimerSeq ChiTaRs ChiTaRs RTN4-RTN4 RTN4 chr2 55205315 RTN4 chr2 55201726 Exonic hg19 NA DB343374 Out-of-frame Intra-chr p16.1 Tumor suppressor gene p16.1 Tumor suppressor gene 116487 ChimerSeq ChiTaRs ChiTaRs CADPS2-LOC440354 CADPS2 chr7 122496171 LOC440354 chr16 29534551 Exonic hg19 NA BE159834 Out-of-frame Inter-chr q31.32 116488 ChimerSeq ChiTaRs ChiTaRs FEZ2-MBP FEZ2 chr2 36789795 MBP chr18 74728787 Exonic hg19 NA DA132184 Out-of-frame Inter-chr p22.2 q23 116489 ChimerSeq ChiTaRs ChiTaRs PPP2CA-PIK3CA PPP2CA chr5 133533001 PIK3CA chr3 178893499 Exonic hg19 NA BI870214 Out-of-frame Inter-chr q31.1 Tumor suppressor gene q26.32 Oncogene 116490 ChimerSeq ChiTaRs ChiTaRs FHIT-RFTN2 FHIT chr3 60323215 RFTN2 chr2 198512770 Exonic hg19 NA CD518664 Out-of-frame Inter-chr p14.2 Tumor suppressor gene q33.1 116491 ChimerSeq ChiTaRs ChiTaRs SCCPDH-ARAP2 SCCPDH chr1 246927630 ARAP2 chr4 36130852 Exonic hg19 NA BF376184 Out-of-frame Inter-chr q44 p14 116492 ChimerSeq ChiTaRs ChiTaRs FAM13B-FAM13B FAM13B chr5 137283137 FAM13B chr5 137282831 Exonic hg19 NA BX503484 Out-of-frame Intra-chr q31.2 q31.2 116493 ChimerSeq ChiTaRs ChiTaRs KDM1A-KDM1A KDM1A chr1 23406088 KDM1A chr1 23406091 Exonic hg19 NA BE936384 Out-of-frame Intra-chr p36.12 p36.12 116494 ChimerSeq ChiTaRs ChiTaRs DIMT1-RNF144B DIMT1 chr5 61686310 RNF144B chr6 18389651 Exonic hg19 NA BE837524 Out-of-frame Inter-chr q12.1 p22.3 116495 ChimerSeq ChiTaRs ChiTaRs BOC-BOC BOC chr3 112999447 BOC chr3 113005540 Exonic hg19 NA BM991714 Out-of-frame Intra-chr q13.2 q13.2 116496 ChimerSeq ChiTaRs ChiTaRs AKIP1-EIF5 AKIP1 chr11 8941208 EIF5 chr14 103810337 Exonic hg19 NA BI058894 Out-of-frame Inter-chr p15.4 q32.32 116497 ChimerSeq ChiTaRs ChiTaRs TOMM7-SEC13 TOMM7 chr7 22862498 SEC13 chr3 10342765 Exonic hg19 NA DW441224 Out-of-frame Inter-chr p15.3 p25.3 116498 ChimerSeq ChiTaRs ChiTaRs BMX-BMX BMX chrX 15560321 BMX chrX 15564956 Exonic hg19 NA BE180434 Out-of-frame Intra-chr p22.2 TK:Tec p22.2 TK:Tec 116499 ChimerSeq ChiTaRs ChiTaRs TLN1-TLN1 TLN1 chr9 35710853 TLN1 chr9 35710606 Exonic hg19 NA BE695654 Out-of-frame Intra-chr p13.3 p13.3 116500 ChimerSeq ChiTaRs ChiTaRs TJP2-ATP2C1 TJP2 chr9 71852889 ATP2C1 chr3 130660434 Exonic hg19 NA CV372064 Out-of-frame Inter-chr q21.11 q22.1 116501 ChimerSeq ChiTaRs ChiTaRs PIGR-FAM3D PIGR chr1 207101910 FAM3D chr3 58629403 Exonic hg19 NA CD724294 Out-of-frame Inter-chr q32.1 p14.2 116502 ChimerSeq ChiTaRs ChiTaRs MCM2-TBC1D5 MCM2 chr3 127330874 TBC1D5 chr3 17768989 Exonic hg19 NA BF364784 Out-of-frame Intra-chr q21.3 p24.3 116503 ChimerSeq ChiTaRs ChiTaRs LRP1B-NAV3 LRP1B chr2 142408688 NAV3 chr12 78473121 Exonic hg19 NA DQ177307 Out-of-frame Inter-chr q22.2 Oncogene Tumor suppressor gene q21.2 116504 ChimerSeq ChiTaRs ChiTaRs NCKAP5-MALAT1 NCKAP5 chr2 134048322 MALAT1 chr11 65270028 Exonic hg19 NA EY123422 Out-of-frame Inter-chr q21.2 q13.1 116505 ChimerSeq ChiTaRs ChiTaRs CUL7-CUL7 CUL7 chr6 43018748 CUL7 chr6 43020022 Exonic hg19 NA BI053744 Out-of-frame Intra-chr p21.1 p21.1 116506 ChimerSeq ChiTaRs ChiTaRs TADA3-GRAMD1C TADA3 chr3 9821760 GRAMD1C chr3 113665545 Exonic hg19 NA BF057854 Out-of-frame Intra-chr p25.3 q13.31 116507 ChimerSeq ChiTaRs ChiTaRs LAMC1-LAMC1 LAMC1 chr1 183048304 LAMC1 chr1 183003441 Exonic hg19 NA AW856574 Out-of-frame Intra-chr q25.3 q25.3 116508 ChimerSeq ChiTaRs ChiTaRs LRRC33-CST7 LRRC33 chr3 196384093 CST7 chr20 24929924 Exonic hg19 NA BM564264 Out-of-frame Inter-chr p11.21 116509 ChimerSeq ChiTaRs ChiTaRs ANKIB1-ANKIB1 ANKIB1 chr7 91936962 ANKIB1 chr7 91936808 Exonic hg19 NA BE172484 Out-of-frame Intra-chr q21.2 q21.2 116510 ChimerSeq ChiTaRs ChiTaRs MAFK-DAB2IP MAFK chr7 1579941 DAB2IP chr9 124357365 Exonic hg19 NA BC060834 Out-of-frame Inter-chr p22.3 Transcription factor q33.2 Tumor suppressor gene 116511 ChimerSeq ChiTaRs ChiTaRs LSAMP-LSAMP LSAMP chr3 115535583 LSAMP chr3 115559347 Exonic hg19 NA DA568784 Out-of-frame Intra-chr q13.31 Tumor suppressor gene q13.31 Tumor suppressor gene 116512 ChimerSeq ChiTaRs ChiTaRs ZNF608-PMPCB ZNF608 chr5 124004600 PMPCB chr7 102953469 Exonic hg19 NA DA111094 Out-of-frame Inter-chr q23.2 Transcription factor q22.1 116513 ChimerSeq ChiTaRs ChiTaRs PRUNE2-TOR1AIP1 PRUNE2 chr9 79299697 TOR1AIP1 chr1 179888370 Exonic hg19 NA BX640664 Out-of-frame Inter-chr q21.2 q25.2 116514 ChimerSeq ChiTaRs ChiTaRs DUSP11-RMND5A DUSP11 chr2 73989756 RMND5A chr2 86986127 Exonic hg19 NA DB345704 Out-of-frame Intra-chr p13.1 p11.2 116515 ChimerSeq ChiTaRs ChiTaRs LRP11-MTMR11 LRP11 chr6 150182439 MTMR11 chr1 149902682 Exonic hg19 NA BE718834 Out-of-frame Inter-chr q25.1 q21.2 116516 ChimerSeq ChiTaRs ChiTaRs LPP-LPP LPP chr3 187899893 LPP chr3 187899968 Exonic hg19 NA AW862224 Out-of-frame Intra-chr q27.3 Oncogene q27.3 Oncogene 116517 ChimerSeq ChiTaRs ChiTaRs ALDH4A1-RMI2 ALDH4A1 chr1 19198070 RMI2 chr16 11445190 Exonic hg19 NA N49444 Out-of-frame Inter-chr p36.13 p13.13 116518 ChimerSeq ChiTaRs ChiTaRs USP47-DFNB31 USP47 chr11 11977969 DFNB31 chr9 117254224 Exonic hg19 NA CB243554 Out-of-frame Inter-chr p15.3 116519 ChimerSeq ChiTaRs ChiTaRs ARNT-ARNT ARNT chr1 150783195 ARNT chr1 150786577 Exonic hg19 NA CB218834 Out-of-frame Intra-chr q21.3 Oncogene Transcription factor q21.3 Oncogene Transcription factor 116520 ChimerSeq ChiTaRs ChiTaRs CPB1-CPB1 CPB1 chr3 148577716 CPB1 chr3 148577696 Exonic hg19 NA BM263604 Out-of-frame Intra-chr q24 q24 116521 ChimerSeq ChiTaRs ChiTaRs GRINA-MRPL14 GRINA chr8 145065941 MRPL14 chr6 44081644 Exonic hg19 NA BE389544 Out-of-frame Inter-chr q24.3 p21.1 116522 ChimerSeq ChiTaRs ChiTaRs AHI1-AHI1 AHI1 chr6 135787041 AHI1 chr6 135787050 Exonic hg19 NA BE768864 Out-of-frame Intra-chr q23.3 q23.3 116523 ChimerSeq ChiTaRs ChiTaRs ZNF638-GAPDH ZNF638 chr2 71603450 GAPDH chr12 6647482 Exonic hg19 NA BC044944 Out-of-frame Inter-chr p13.3 p13.31 116524 ChimerSeq ChiTaRs ChiTaRs REPS1-ZNF669 REPS1 chr6 139225777 ZNF669 chr1 247264055 Exonic hg19 NA BE933804 Out-of-frame Inter-chr q24.1 q44 Transcription factor 116525 ChimerSeq ChiTaRs ChiTaRs IGFBP7-PLXNA4 IGFBP7 chr4 57907100 PLXNA4 chr7 131810602 Exonic hg19 NA T05904 Out-of-frame Inter-chr q12 Tumor suppressor gene q32.3 116526 ChimerSeq ChiTaRs ChiTaRs EPAS1-EPAS1 EPAS1 chr2 46594587 EPAS1 chr2 46594578 Exonic hg19 NA BE159964 Out-of-frame Intra-chr p21 Tumor suppressor gene Transcription factor p21 Tumor suppressor gene Transcription factor 116527 ChimerSeq ChiTaRs ChiTaRs TMCC1-TMCC1 TMCC1 chr3 129566206 TMCC1 chr3 129566209 Exonic hg19 NA CA945214 Out-of-frame Intra-chr q22.1 q22.1 116528 ChimerSeq ChiTaRs ChiTaRs IGFBP3-DPP7 IGFBP3 chr7 45960871 DPP7 chr9 140007878 Exonic hg19 NA DA021374 5'UTR-CDS Inter-chr p12.3 Tumor suppressor gene q34.3 116529 ChimerSeq ChiTaRs ChiTaRs ITPRIP-KRT4 ITPRIP chr10 106081556 KRT4 chr12 53200333 Exonic hg19 NA AW872714 Out-of-frame Inter-chr q25.1 q13.13 116530 ChimerSeq ChiTaRs ChiTaRs MOSPD3-LMO3 MOSPD3 chr7 100213017 LMO3 chr12 16703427 Exonic hg19 NA T05444 Out-of-frame Inter-chr q22.1 p12.3 116531 ChimerSeq ChiTaRs ChiTaRs FNDC3B-GORASP2 FNDC3B chr3 172118075 GORASP2 chr2 171785762 Exonic hg19 NA DA377894 Out-of-frame Inter-chr q26.31 q31.1 116532 ChimerSeq ChiTaRs ChiTaRs NAMPT-NAMPT NAMPT chr7 105907632 NAMPT chr7 105907180 Exonic hg19 NA BE940024 Out-of-frame Intra-chr q22.3 q22.3 116533 ChimerSeq ChiTaRs ChiTaRs ACSL3-ACSL3 ACSL3 chr2 223807814 ACSL3 chr2 223807994 Exonic hg19 NA BM684664 Out-of-frame Intra-chr q36.1 q36.1 116534 ChimerSeq ChiTaRs ChiTaRs RABGGTB-SLC44A5 RABGGTB chr1 76253289 SLC44A5 chr1 75683619 Exonic hg19 NA DA794004 Out-of-frame Intra-chr p31.1 p31.1 116535 ChimerSeq ChiTaRs ChiTaRs SPP1-SPP1 SPP1 chr4 88903727 SPP1 chr4 88903744 Exonic hg19 NA BF081314 Out-of-frame Intra-chr q22.1 q22.1 116536 ChimerSeq ChiTaRs ChiTaRs MIA3-SLAIN1 MIA3 chr1 222826620 SLAIN1 chr13 78315658 Exonic hg19 NA AW899124 Out-of-frame Inter-chr q41 q22.3 116537 ChimerSeq ChiTaRs ChiTaRs EZR-EZR EZR chr6 159192305 EZR chr6 159190912 Exonic hg19 NA BF084744 Out-of-frame Intra-chr q25.3 q25.3 116538 ChimerSeq ChiTaRs ChiTaRs AIMP2-AIMP2 AIMP2 chr7 6063141 AIMP2 chr7 6062259 Exonic hg19 NA W25934 Out-of-frame Intra-chr p22.1 Tumor suppressor gene p22.1 Tumor suppressor gene 116539 ChimerSeq ChiTaRs ChiTaRs UBN2-UBN2 UBN2 chr7 138946033 UBN2 chr7 138969225 Exonic hg19 NA CB048874 Out-of-frame Intra-chr q34 q34 116540 ChimerSeq ChiTaRs ChiTaRs LRBA-LRBA LRBA chr4 151816471 LRBA chr4 151762011 Exonic hg19 NA AW991984 Out-of-frame Intra-chr q31.3 q31.3 116541 ChimerSeq ChiTaRs ChiTaRs VCL-VCL VCL chr10 75879787 VCL chr10 75879237 Exonic hg19 NA CA310524 Out-of-frame Intra-chr q22.2 q22.2 116542 ChimerSeq ChiTaRs ChiTaRs RPL37-LOC254100 RPL37 chr5 40835301 LOC254100 chr11 65337622 Exonic hg19 NA BF726594 Out-of-frame Inter-chr p13.1 116543 ChimerSeq ChiTaRs ChiTaRs MACF1-C1D MACF1 chr1 39688637 C1D chr2 68270061 Exonic hg19 NA BC017884 Out-of-frame Inter-chr p34.3 p14 116544 ChimerSeq ChiTaRs ChiTaRs LAP3-LAP3 LAP3 chr4 17596353 LAP3 chr4 17595795 Exonic hg19 NA BF377094 Out-of-frame Intra-chr p15.32 p15.32 116545 ChimerSeq ChiTaRs ChiTaRs ITSN2-ITSN2 ITSN2 chr2 24515625 ITSN2 chr2 24517613 Exonic hg19 NA BF104974 Out-of-frame Intra-chr p23.3 p23.3 116546 ChimerSeq ChiTaRs ChiTaRs PGC-PGC PGC chr6 41707606 PGC chr6 41708252 Exonic hg19 NA AW869314 Out-of-frame Intra-chr p21.1 p21.1 116547 ChimerSeq ChiTaRs ChiTaRs ZC3H6-ZC3H6 ZC3H6 chr2 113089859 ZC3H6 chr2 113057425 Exonic hg19 NA BX649154 Out-of-frame Intra-chr q14.1 q14.1 116548 ChimerSeq ChiTaRs ChiTaRs TIAM2-NTN4 TIAM2 chr6 155456944 NTN4 chr12 96111311 Exonic hg19 NA T05134 Out-of-frame Inter-chr q25.2 q22 116549 ChimerSeq ChiTaRs ChiTaRs ARHGEF9-DIP2A ARHGEF9 chrX 62860627 DIP2A chr21 47970554 Exonic hg19 NA BE696194 Out-of-frame Inter-chr q11.2 q22.3 116550 ChimerSeq ChiTaRs ChiTaRs ADAM12-PAPPA2 ADAM12 chr10 127892494 PAPPA2 chr1 176607591 Exonic hg19 NA CV374024 Out-of-frame Inter-chr q26.2 q25.2 116551 ChimerSeq ChiTaRs ChiTaRs BRD2-TMBIM6 BRD2 chr6 4180654 TMBIM6 chr12 50156712 Exonic hg19 NA BE005984 Out-of-frame Inter-chr Atypical:BRD q13.12 116552 ChimerSeq ChiTaRs ChiTaRs MAPK10-NUP188 MAPK10 chr4 87205530 NUP188 chr9 131761964 Exonic hg19 NA T07564 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q34.11 116553 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-INS-IGF2 INS-IGF2 chr11 2150458 INS-IGF2 chr11 2150347 Exonic hg19 NA T57444 Out-of-frame Intra-chr p15.5 p15.5 Oncogene 116554 ChimerSeq ChiTaRs ChiTaRs UNC5B-UNC5B UNC5B chr10 73028319 UNC5B chr10 73028097 Exonic hg19 NA AW994304 Out-of-frame Intra-chr q22.1 Tumor suppressor gene q22.1 Tumor suppressor gene 116555 ChimerSeq ChiTaRs ChiTaRs ZMAT4-ZMAT4 ZMAT4 chr8 40438740 ZMAT4 chr8 40554515 Exonic hg19 NA BY798534 Out-of-frame Intra-chr p11.21 Transcription factor p11.21 Transcription factor 116556 ChimerSeq ChiTaRs ChiTaRs FIBIN-C6orf10 FIBIN chr11 27016775 C6orf10 chr6 3641779 Exonic hg19 NA BE089934 Out-of-frame Inter-chr p14.2 116557 ChimerSeq ChiTaRs ChiTaRs SSBP1-SKIL SSBP1 chr7 141445318 SKIL chr3 170075509 Exonic hg19 NA DB038344 Out-of-frame Inter-chr q26.2 Tumor suppressor gene Transcription factor 116558 ChimerSeq ChiTaRs ChiTaRs CNTN4-RASA3 CNTN4 chr3 2163458 RASA3 chr13 114758538 Exonic hg19 NA AW827134 Out-of-frame Inter-chr p26.3 116559 ChimerSeq ChiTaRs ChiTaRs SLC12A8-EZR SLC12A8 chr3 124802315 EZR chr6 159197319 Exonic hg19 NA CA314324 Out-of-frame Inter-chr q21.2 q25.3 116560 ChimerSeq ChiTaRs ChiTaRs CELF1-DNAJC3 CELF1 chr11 47488801 DNAJC3 chr13 96329483 Exonic hg19 NA U28424 Out-of-frame Inter-chr p11.2 q32.1 116561 ChimerSeq ChiTaRs ChiTaRs MFN2-MFN2 MFN2 chr1 12066664 MFN2 chr1 12062133 Exonic hg19 NA BF689364 Out-of-frame Intra-chr p36.22 p36.22 116562 ChimerSeq ChiTaRs ChiTaRs TTN-TTN TTN chr2 179569672 TTN chr2 179569124 Exonic hg19 NA F00774 Out-of-frame Intra-chr q31.2 CAMK:MLCK q31.2 CAMK:MLCK 116563 ChimerSeq ChiTaRs ChiTaRs ACTB-SUPV3L1 ACTB chr7 5567775 SUPV3L1 chr10 70967584 Exonic hg19 NA BI063294 Out-of-frame Inter-chr p22.1 q22.1 116564 ChimerSeq ChiTaRs ChiTaRs SCN11A-ZCCHC14 SCN11A chr3 38887632 ZCCHC14 chr16 87517137 Exonic hg19 NA BF433084 Out-of-frame Inter-chr p22.2 q24.2 116565 ChimerSeq ChiTaRs ChiTaRs NPR2-RASAL2 NPR2 chr9 35794991 RASAL2 chr1 178371899 Exonic hg19 NA BF369934 Out-of-frame Inter-chr p13.3 Tumor suppressor gene q25.2 Tumor suppressor gene 116566 ChimerSeq ChiTaRs ChiTaRs SEMA4D-SEMA4D SEMA4D chr9 92046799 SEMA4D chr9 92046267 Exonic hg19 NA EB360774 Out-of-frame Intra-chr q22.2 q22.2 116567 ChimerSeq ChiTaRs ChiTaRs ECHDC2-FMR1-AS1 ECHDC2 chr1 53380619 FMR1-AS1 chrX 147002190 Exonic hg19 NA CV404864 Out-of-frame Inter-chr p32.3 q27.3 116568 ChimerSeq ChiTaRs ChiTaRs SGK1-SGK1 SGK1 chr6 134559685 SGK1 chr6 134559320 Exonic hg19 NA BF351614 Out-of-frame Intra-chr q23.2 AGC:SGK Oncogene q23.2 AGC:SGK Oncogene 116569 ChimerSeq ChiTaRs ChiTaRs SFTPB-SFTPB SFTPB chr2 85893869 SFTPB chr2 85894801 Exonic hg19 NA BE827604 Out-of-frame Intra-chr p11.2 p11.2 116570 ChimerSeq ChiTaRs ChiTaRs ZNF330-EP400NL ZNF330 chr4 142143704 EP400NL chr12 132569878 Exonic hg19 NA BF223164 Out-of-frame Inter-chr q31.21 q24.33 116571 ChimerSeq ChiTaRs ChiTaRs FAM133B-MDM2 FAM133B chr7 92219682 MDM2 chr12 69235977 Exonic hg19 NA BC079834 Out-of-frame Inter-chr q21.2 q15 Oncogene 116572 ChimerSeq ChiTaRs ChiTaRs SMARCA2-SMARCA2 SMARCA2 chr9 2187766 SMARCA2 chr9 2183045 Exonic hg19 NA CK820594 Out-of-frame Intra-chr p24.3 Tumor suppressor gene p24.3 Tumor suppressor gene 116573 ChimerSeq ChiTaRs ChiTaRs IL8-TMEM48 IL8 chr4 74609413 TMEM48 chr1 54262538 Exonic hg19 NA AW953174 Out-of-frame Inter-chr 116574 ChimerSeq ChiTaRs ChiTaRs EFEMP1-EFEMP1 EFEMP1 chr2 56104937 EFEMP1 chr2 56102081 Exonic hg19 NA BF337044 Out-of-frame Intra-chr p16.1 p16.1 116575 ChimerSeq ChiTaRs ChiTaRs SLC39A8-GLS SLC39A8 chr4 103183713 GLS chr2 191798856 Exonic hg19 NA AW999094 Out-of-frame Inter-chr q24 q32.2 Tumor suppressor gene 116576 ChimerSeq ChiTaRs ChiTaRs EPHB2-EPHB2 EPHB2 chr1 23241080 EPHB2 chr1 23240154 Exonic hg19 NA CB241094 Out-of-frame Intra-chr p36.12 Tumor suppressor gene p36.12 Tumor suppressor gene 116577 ChimerSeq ChiTaRs ChiTaRs LCN1-LCN1 LCN1 chr9 138418082 LCN1 chr9 138417142 Exonic hg19 NA CK430284 Out-of-frame Intra-chr q34.3 q34.3 116578 ChimerSeq ChiTaRs ChiTaRs WBP5-NEDD9 WBP5 chrX 102612856 NEDD9 chr6 11188898 Exonic hg19 NA BF085654 Out-of-frame Inter-chr p24.2 116579 ChimerSeq ChiTaRs ChiTaRs UGCG-UGCG UGCG chr9 114672806 UGCG chr9 114672833 Exonic hg19 NA BE185694 Out-of-frame Intra-chr q31.3 q31.3 116580 ChimerSeq ChiTaRs ChiTaRs LRP1B-KCNH8 LRP1B chr2 142611154 KCNH8 chr3 19362644 Exonic hg19 NA BF364794 Out-of-frame Inter-chr q22.2 Oncogene Tumor suppressor gene p24.3 116581 ChimerSeq ChiTaRs ChiTaRs ZFPM2-ZFPM2 ZFPM2 chr8 106807731 ZFPM2 chr8 106807705 Exonic hg19 NA BI467364 Out-of-frame Intra-chr q22.3 Transcription factor q22.3 Transcription factor 116582 ChimerSeq ChiTaRs ChiTaRs PPP2CA-PPP2CA PPP2CA chr5 133533007 PPP2CA chr5 133532791 Exonic hg19 NA T39914 Out-of-frame Intra-chr q31.1 Tumor suppressor gene q31.1 Tumor suppressor gene 116583 ChimerSeq ChiTaRs ChiTaRs TMEM64-COPE TMEM64 chr8 91637066 COPE chr19 19014171 Exonic hg19 NA BE794044 Out-of-frame Inter-chr q21.3 p13.11 116584 ChimerSeq ChiTaRs ChiTaRs FBXO24-RBFOX2 FBXO24 chr7 100198351 RBFOX2 chr22 36205827 Exonic hg19 NA BF753854 Out-of-frame Inter-chr q22.1 116585 ChimerSeq ChiTaRs ChiTaRs SNHG1-HLA-G SNHG1 chr11 62622551 HLA-G chr6 1203670 Exonic hg19 NA DA046504 Out-of-frame Inter-chr q12.3 p22.1 116586 ChimerSeq ChiTaRs ChiTaRs ERBB2IP-TJP2 ERBB2IP chr5 65363659 TJP2 chr9 71865147 Exonic hg19 NA BX641474 Out-of-frame Inter-chr q21.11 116587 ChimerSeq ChiTaRs ChiTaRs CSGALNACT1-LARGE CSGALNACT1 chr8 19300961 LARGE chr22 33790310 Exonic hg19 NA N52914 Out-of-frame Inter-chr p21.3 116588 ChimerSeq ChiTaRs ChiTaRs FOXP2-FOXP2 FOXP2 chr7 113735306 FOXP2 chr7 113735323 Exonic hg19 NA AW818584 Out-of-frame Intra-chr q31.1 Transcription factor q31.1 Transcription factor 116589 ChimerSeq ChiTaRs ChiTaRs ATP11C-TMEM136 ATP11C chrX 138825741 TMEM136 chr11 120197275 Exonic hg19 NA BF352674 Out-of-frame Inter-chr q27.1 q23.3 116590 ChimerSeq ChiTaRs ChiTaRs VSTM4-VSTM4 VSTM4 chr10 50226750 VSTM4 chr10 50226737 Exonic hg19 NA BF091574 Out-of-frame Intra-chr q11.23 q11.23 116591 ChimerSeq ChiTaRs ChiTaRs MTMR14-HSPE1-MOB4 MTMR14 chr3 9709380 HSPE1-MOB4 chr2 198416929 Exonic hg19 NA BM689654 Out-of-frame Inter-chr p25.3 q33.1 116592 ChimerSeq ChiTaRs ChiTaRs EIF3H-CMC1 EIF3H chr8 117668222 CMC1 chr3 28287324 Exonic hg19 NA DA942074 Out-of-frame Inter-chr q24.11 p24.1 116593 ChimerSeq ChiTaRs ChiTaRs C4orf22-MYH13 C4orf22 chr4 81580773 MYH13 chr17 10247240 Exonic hg19 NA CA335494 Out-of-frame Inter-chr q21.21 p13.1 116594 ChimerSeq ChiTaRs ChiTaRs CXCL14-DCAF16 CXCL14 chr5 134914166 DCAF16 chr4 17803054 Exonic hg19 NA CB217634 Out-of-frame Inter-chr q31.1 Tumor suppressor gene p15.31 116595 ChimerSeq ChiTaRs ChiTaRs CD44-CD44 CD44 chr11 35251015 CD44 chr11 35250675 Exonic hg19 NA BM280254 3'UTR-CDS Intra-chr p13 Oncogene Tumor suppressor gene p13 Oncogene Tumor suppressor gene 116596 ChimerSeq ChiTaRs ChiTaRs ZNF503-KIAA0895 ZNF503 chr10 77158084 KIAA0895 chr7 36375089 Exonic hg19 NA BE856654 Out-of-frame Inter-chr q22.2 Transcription factor p14.2 116597 ChimerSeq ChiTaRs ChiTaRs PPP1R9A-PPP1R9A PPP1R9A chr7 94633716 PPP1R9A chr7 94632367 Exonic hg19 NA BM721054 Out-of-frame Intra-chr q21.3 q21.3 116598 ChimerSeq ChiTaRs ChiTaRs KCNMA1-DCC KCNMA1 chr10 78799391 DCC chr18 51031801 Exonic hg19 NA BE930864 Out-of-frame Inter-chr q22.3 q21.2 Oncogene Tumor suppressor gene 116599 ChimerSeq ChiTaRs ChiTaRs EEF1E1-EEF1E1 EEF1E1 chr6 8086061 EEF1E1 chr6 8085729 Exonic hg19 NA BE062254 Out-of-frame Intra-chr p24.3 Tumor suppressor gene p24.3 Tumor suppressor gene 116600 ChimerSeq ChiTaRs ChiTaRs IQCJ-SCHIP1-CD55 IQCJ-SCHIP1 chr3 159610750 CD55 chr1 207495848 Exonic hg19 NA BF083314 Out-of-frame Inter-chr q25.32 q32.2 116601 ChimerSeq ChiTaRs ChiTaRs TMEM184C-GDE1 TMEM184C chr4 148556370 GDE1 chr16 19519009 Exonic hg19 NA BF002424 Out-of-frame Inter-chr q31.23 p12.3 116602 ChimerSeq ChiTaRs ChiTaRs HNRNPF-NCAM2 HNRNPF chr10 43881912 NCAM2 chr21 22589407 Exonic hg19 NA BF378144 Out-of-frame Inter-chr q11.21 q21.1 Tumor suppressor gene 116603 ChimerSeq ChiTaRs ChiTaRs SUN1-KRT5 SUN1 chr7 914536 KRT5 chr12 52908359 Exonic hg19 NA CB243964 Out-of-frame Inter-chr p22.3 q13.13 116604 ChimerSeq ChiTaRs ChiTaRs EZH2-STAP2 EZH2 chr7 148529818 STAP2 chr19 4330011 Exonic hg19 NA CB115094 Out-of-frame Inter-chr q36.1 Oncogene Tumor suppressor gene p13.3 116605 ChimerSeq ChiTaRs ChiTaRs ADAM8-ADAM8 ADAM8 chr10 135076691 ADAM8 chr10 135076087 Exonic hg19 NA CR994434 Out-of-frame Intra-chr q26.3 q26.3 116606 ChimerSeq ChiTaRs ChiTaRs CTPS2-CTPS2 CTPS2 chrX 16673950 CTPS2 chrX 16659860 Exonic hg19 NA CV403184 Out-of-frame Intra-chr p22.2 p22.2 116607 ChimerSeq ChiTaRs ChiTaRs SSRP1-EIF3M SSRP1 chr11 57099366 EIF3M chr11 32610231 Exonic hg19 NA BF753104 Out-of-frame Intra-chr q12.1 p13 116608 ChimerSeq ChiTaRs ChiTaRs GBP2-ARHGAP15 GBP2 chr1 89578348 ARHGAP15 chr2 144042666 Exonic hg19 NA BE180764 Out-of-frame Inter-chr p22.2 q22.2 116609 ChimerSeq ChiTaRs ChiTaRs OXR1-CAV1 OXR1 chr8 107764915 CAV1 chr7 116201009 Exonic hg19 NA D61924 Out-of-frame Inter-chr q23.1 q31.2 Tumor suppressor gene 116610 ChimerSeq ChiTaRs ChiTaRs KIF1B-MAGI2 KIF1B chr1 10437138 MAGI2 chr7 78043961 Exonic hg19 NA BE702394 Out-of-frame Inter-chr p36.22 Tumor suppressor gene q21.11 116611 ChimerSeq ChiTaRs ChiTaRs USP9X-USP9X USP9X chrX 41060156 USP9X chrX 41059725 Exonic hg19 NA BE066994 Out-of-frame Intra-chr p11.4 Oncogene p11.4 Oncogene 116612 ChimerSeq ChiTaRs ChiTaRs FYCO1-FKBP15 FYCO1 chr3 46026410 FKBP15 chr9 115938926 Exonic hg19 NA BI023624 Out-of-frame Inter-chr p21.31 q32 116613 ChimerSeq ChiTaRs ChiTaRs SHISA5-ST6GALNAC6 SHISA5 chr3 48539849 ST6GALNAC6 chr9 130650448 Exonic hg19 NA CV381644 Out-of-frame Inter-chr p21.31 q34.11 116614 ChimerSeq ChiTaRs ChiTaRs SNX9-SNX9 SNX9 chr6 158317907 SNX9 chr6 158317908 Exonic hg19 NA CR995884 Out-of-frame Intra-chr q25.3 q25.3 116615 ChimerSeq ChiTaRs ChiTaRs MPZL1-MPZL1 MPZL1 chr1 167760060 MPZL1 chr1 167759626 Exonic hg19 NA CA420334 Out-of-frame Intra-chr q24.2 q24.2 116616 ChimerSeq ChiTaRs ChiTaRs RIMS1-RIMS1 RIMS1 chr6 73017072 RIMS1 chr6 73023280 Exonic hg19 NA BF744774 Out-of-frame Intra-chr q13 q13 116617 ChimerSeq ChiTaRs ChiTaRs TMEM87B-SLC1A3 TMEM87B chr2 112854852 SLC1A3 chr5 36659676 Exonic hg19 NA BF368084 Out-of-frame Inter-chr q13 p13.2 116618 ChimerSeq ChiTaRs ChiTaRs QKI-QKI QKI chr6 163835830 QKI chr6 163835666 Exonic hg19 NA CD109394 Out-of-frame Intra-chr q26 q26 116619 ChimerSeq ChiTaRs ChiTaRs RTN4-RTN4 RTN4 chr2 55209791 RTN4 chr2 55214639 Exonic hg19 NA BE007854 Out-of-frame Intra-chr p16.1 Tumor suppressor gene p16.1 Tumor suppressor gene 116620 ChimerSeq ChiTaRs ChiTaRs PLEKHA2-LHFP PLEKHA2 chr8 38831431 LHFP chr13 39917029 Exonic hg19 NA BM682864 Out-of-frame Inter-chr p11.22 q14.11 116621 ChimerSeq ChiTaRs ChiTaRs HP1BP3-HP1BP3 HP1BP3 chr1 21072124 HP1BP3 chr1 21071108 Exonic hg19 NA BF091604 Out-of-frame Intra-chr p36.12 p36.12 116622 ChimerSeq ChiTaRs ChiTaRs RNF168-SCPEP1 RNF168 chr3 196197645 SCPEP1 chr17 55074320 Exonic hg19 NA BI028074 Out-of-frame Inter-chr q29 q22 116623 ChimerSeq ChiTaRs ChiTaRs COL3A1-ARHGEF26 COL3A1 chr2 189876965 ARHGEF26 chr3 153938570 Exonic hg19 NA CN367234 Out-of-frame Inter-chr q32.2 116624 ChimerSeq ChiTaRs ChiTaRs MADD-MADD MADD chr11 47336870 MADD chr11 47345220 Exonic hg19 NA BE799184 Out-of-frame Intra-chr p11.2 Tumor suppressor gene p11.2 Tumor suppressor gene 116625 ChimerSeq ChiTaRs ChiTaRs CERS6-QSER1 CERS6 chr2 169406402 QSER1 chr11 32926552 Exonic hg19 NA BE085594 Out-of-frame Inter-chr q24.3 p13 116626 ChimerSeq ChiTaRs ChiTaRs KCNK1-MKNK2 KCNK1 chr1 233802576 MKNK2 chr19 2046405 Exonic hg19 NA BE720244 Out-of-frame Inter-chr q42.2 p13.3 116627 ChimerSeq ChiTaRs ChiTaRs RBM15B-RBM15B RBM15B chr3 51429235 RBM15B chr3 51429274 Exonic hg19 NA L13434 Out-of-frame Intra-chr p21.2 p21.2 116628 ChimerSeq ChiTaRs ChiTaRs ADAMTS4-ADAMTS4 ADAMTS4 chr1 161160753 ADAMTS4 chr1 161160830 Exonic hg19 NA BE774294 Out-of-frame Intra-chr q23.3 q23.3 116629 ChimerSeq ChiTaRs ChiTaRs PDCD11-ANKFY1 PDCD11 chr10 105158283 ANKFY1 chr17 4080433 Exonic hg19 NA DW465984 Out-of-frame Inter-chr q24.33 p13.2 116630 ChimerSeq ChiTaRs ChiTaRs SND1-MIR548AI SND1 chr7 127723842 MIR548AI chr14 30105496 Exonic hg19 NA CN412384 Out-of-frame Inter-chr q32.1 q16.2 116631 ChimerSeq ChiTaRs ChiTaRs UNC5D-PRKAR2B UNC5D chr8 35317316 PRKAR2B chr7 106689677 Exonic hg19 NA T06404 Out-of-frame Inter-chr p12 Tumor suppressor gene 116632 ChimerSeq ChiTaRs ChiTaRs CD59-CD59 CD59 chr11 33727589 CD59 chr11 33731148 Exonic hg19 NA BE079924 Out-of-frame Intra-chr p13 p13 116633 ChimerSeq ChiTaRs ChiTaRs DBN1-SCAF8 DBN1 chr5 176886658 SCAF8 chr6 155126505 Exonic hg19 NA M79054 Out-of-frame Inter-chr q35.3 q25.2 116634 ChimerSeq ChiTaRs ChiTaRs SOX4-SOX4 SOX4 chr6 21598474 SOX4 chr6 21598430 Exonic hg19 NA BI088114 Out-of-frame Intra-chr p22.3 Transcription factor p22.3 Transcription factor 116635 ChimerSeq ChiTaRs ChiTaRs TUBB2B-DYRK2 TUBB2B chr6 3227887 DYRK2 chr12 68052307 Exonic hg19 NA DA506064 Out-of-frame Inter-chr p25.2 q15 CMGC:DYRK 116636 ChimerSeq ChiTaRs ChiTaRs MAPK14-POP5 MAPK14 chr6 36038835 POP5 chr12 121017498 Exonic hg19 NA BM826654 Out-of-frame Inter-chr p21.31 q24.31 116637 ChimerSeq ChiTaRs ChiTaRs ZMYND11-ZMYND11 ZMYND11 chr10 271013 ZMYND11 chr10 270706 Exonic hg19 NA BX951104 Out-of-frame Intra-chr p15.3 Tumor suppressor gene p15.3 Tumor suppressor gene 116638 ChimerSeq ChiTaRs ChiTaRs ASH1L-CAPRIN1 ASH1L chr1 155369550 CAPRIN1 chr11 34119265 Exonic hg19 NA BM150614 Out-of-frame Inter-chr q22 Transcription factor p13 116639 ChimerSeq ChiTaRs ChiTaRs IMMT-IMMT IMMT chr2 86371423 IMMT chr2 86371552 Exonic hg19 NA CB854254 Out-of-frame Intra-chr p11.2 p11.2 116640 ChimerSeq ChiTaRs ChiTaRs RAB3GAP2-DLGAP4 RAB3GAP2 chr1 220445715 DLGAP4 chr20 35156004 Exonic hg19 NA BI907334 Out-of-frame Inter-chr q41 q11.23 116641 ChimerSeq ChiTaRs ChiTaRs RPS8-NISCH RPS8 chr1 45242410 NISCH chr3 52526529 Exonic hg19 NA AW948714 Out-of-frame Inter-chr p34.1 p21.1 116642 ChimerSeq ChiTaRs ChiTaRs EPC2-CNKSR3 EPC2 chr2 149528739 CNKSR3 chr6 154815608 Exonic hg19 NA BF370504 Out-of-frame Inter-chr q23.1 q25.2 116643 ChimerSeq ChiTaRs ChiTaRs ASTN1-ATP2A3 ASTN1 chr1 176884242 ATP2A3 chr17 3855134 Exonic hg19 NA BI025114 Out-of-frame Inter-chr q25.2 p13.2 116644 ChimerSeq ChiTaRs ChiTaRs RPS6-RPL27 RPS6 chr9 19376507 RPL27 chr17 41150472 Exonic hg19 NA T59674 Out-of-frame Inter-chr p22.1 q21.31 116645 ChimerSeq ChiTaRs ChiTaRs XPO1-XPO1 XPO1 chr2 61714085 XPO1 chr2 61715731 Exonic hg19 NA DB198554 Out-of-frame Intra-chr p15 Oncogene p15 Oncogene 116646 ChimerSeq ChiTaRs ChiTaRs TLN1-TLN1 TLN1 chr9 35704070 TLN1 chr9 35704062 Exonic hg19 NA W28594 Out-of-frame Intra-chr p13.3 p13.3 116647 ChimerSeq ChiTaRs ChiTaRs ZMYM6-MIR548AE2 ZMYM6 chr1 35452070 MIR548AE2 chr16 48386120 Exonic hg19 NA W81504 Out-of-frame Inter-chr p34.3 q11.2 116648 ChimerSeq ChiTaRs ChiTaRs PGBD5-HBS1L PGBD5 chr1 230481000 HBS1L chr6 135304453 Exonic hg19 NA CV361974 Out-of-frame Inter-chr q42.13 q23.3 116649 ChimerSeq ChiTaRs ChiTaRs GAD1-RUNX1T1 GAD1 chr2 171716410 RUNX1T1 chr8 93030731 Exonic hg19 NA M85674 Out-of-frame Inter-chr q31.1 q21.3 Oncogene 116650 ChimerSeq ChiTaRs ChiTaRs HLA-DPB1-RASSF2 HLA-DPB1 chr6 4531143 RASSF2 chr20 4791210 Exonic hg19 NA BF374124 Out-of-frame Inter-chr p13 116651 ChimerSeq ChiTaRs ChiTaRs SDK1-XIST SDK1 chr7 3534346 XIST chrX 73062358 Exonic hg19 NA T05034 Out-of-frame Inter-chr p22.2 q13.2 Tumor suppressor gene 116652 ChimerSeq ChiTaRs ChiTaRs ZNF248-PCDH15 ZNF248 chr10 38145373 PCDH15 chr10 55705960 Exonic hg19 NA BC080534 Out-of-frame Intra-chr p11.21 Transcription factor q21.1 116653 ChimerSeq ChiTaRs ChiTaRs ECE1-CES2 ECE1 chr1 21545023 CES2 chr16 66978598 Exonic hg19 NA AW882114 Out-of-frame Inter-chr p36.12 q22.1 116654 ChimerSeq ChiTaRs ChiTaRs PPARD-TMEM2 PPARD chr6 35367908 TMEM2 chr9 74367448 Exonic hg19 NA BF737994 Out-of-frame Inter-chr p21.31 Transcription factor q21.13 116655 ChimerSeq ChiTaRs ChiTaRs MRPS27-MRPS27 MRPS27 chr5 71528331 MRPS27 chr5 71516634 Exonic hg19 NA BI763814 Out-of-frame Intra-chr q13.2 q13.2 116656 ChimerSeq ChiTaRs ChiTaRs CSRP1-CSRP1 CSRP1 chr1 201452943 CSRP1 chr1 201453250 Exonic hg19 NA AW900244 Out-of-frame Intra-chr q32.1 q32.1 116657 ChimerSeq ChiTaRs ChiTaRs PRDX1-WDR59 PRDX1 chr1 45977225 WDR59 chr16 74985356 Exonic hg19 NA BF763254 Out-of-frame Inter-chr p34.1 q23.1 116658 ChimerSeq ChiTaRs ChiTaRs TSPAN14-TSPAN14 TSPAN14 chr10 82280500 TSPAN14 chr10 82280935 Exonic hg19 NA BF754904 Out-of-frame Intra-chr q23.1 q23.1 116659 ChimerSeq ChiTaRs ChiTaRs SOX11-ACTL8 SOX11 chr2 5841349 ACTL8 chr1 18092860 Exonic hg19 NA M85404 Out-of-frame Inter-chr p25.2 Oncogene Tumor suppressor gene Transcription factor p36.13 116660 ChimerSeq ChiTaRs ChiTaRs ROBO1-ACKR3 ROBO1 chr3 78987881 ACKR3 chr2 237481611 Exonic hg19 NA BE836744 Out-of-frame Inter-chr p12.3 Tumor suppressor gene q37.3 116661 ChimerSeq ChiTaRs ChiTaRs ARMCX5-GPRASP2-ARMCX5-GPRASP2 ARMCX5-GPRASP2 chrX 101972655 ARMCX5-GPRASP2 chrX 101972301 Exonic hg19 NA CB243374 Out-of-frame Intra-chr q22.1 q22.1 116662 ChimerSeq ChiTaRs ChiTaRs IGFBP3-DPP7 IGFBP3 chr7 45960871 DPP7 chr9 140007829 Exonic hg19 NA DA021344 5'UTR-CDS Inter-chr p12.3 Tumor suppressor gene q34.3 116663 ChimerSeq ChiTaRs ChiTaRs ROBO1-SSFA2 ROBO1 chr3 78774272 SSFA2 chr2 182782310 Exonic hg19 NA CV344394 Out-of-frame Inter-chr p12.3 Tumor suppressor gene q31.3 116664 ChimerSeq ChiTaRs ChiTaRs FLNA-FLNA FLNA chrX 153594478 FLNA chrX 153593525 Exonic hg19 NA BE838054 Out-of-frame Intra-chr q28 Tumor suppressor gene q28 Tumor suppressor gene 116665 ChimerSeq ChiTaRs ChiTaRs RUNX1T1-TANC2 RUNX1T1 chr8 93078780 TANC2 chr17 61226151 Exonic hg19 NA DQ202695 Out-of-frame Inter-chr q21.3 Oncogene q23.2 116666 ChimerSeq ChiTaRs ChiTaRs RING1-RING1 RING1 chr6 4412484 RING1 chr6 4412478 Exonic hg19 NA BF740184 Out-of-frame Intra-chr 116667 ChimerSeq ChiTaRs ChiTaRs LHFPL4-LHFPL4 LHFPL4 chr3 9550578 LHFPL4 chr3 9550589 Exonic hg19 NA T41094 Out-of-frame Intra-chr p25.3 p25.3 116668 ChimerSeq ChiTaRs ChiTaRs MRPS22-MRPS22 MRPS22 chr3 139075747 MRPS22 chr3 139075371 Exonic hg19 NA BF329054 Out-of-frame Intra-chr q23 q23 116669 ChimerSeq ChiTaRs ChiTaRs FAM114A2-MRPL22 FAM114A2 chr5 153418470 MRPL22 chr5 154330379 Exonic hg19 NA DA331644 Out-of-frame Intra-chr q33.2 q33.2 116670 ChimerSeq ChiTaRs ChiTaRs DCAF8-DCAF8 DCAF8 chr1 160248659 DCAF8 chr1 160248890 Exonic hg19 NA BI964144 Out-of-frame Intra-chr q23.2 q23.2 116671 ChimerSeq ChiTaRs ChiTaRs LOC253039-EHD2 LOC253039 chr9 123605983 EHD2 chr19 48219880 Exonic hg19 NA BC062554 Out-of-frame Inter-chr q13.33 116672 ChimerSeq ChiTaRs ChiTaRs ALDH1L1-SPATA6L ALDH1L1 chr3 125848723 SPATA6L chr9 4663915 Exonic hg19 NA BF365444 Out-of-frame Inter-chr q21.3 p24.1 116673 ChimerSeq ChiTaRs ChiTaRs PARP12-KCTD20 PARP12 chr7 139741528 KCTD20 chr6 36456087 Exonic hg19 NA BI260074 Out-of-frame Inter-chr q34 p21.31 116674 ChimerSeq ChiTaRs ChiTaRs ARID4B-GGPS1 ARID4B chr1 235491471 GGPS1 chr1 235498555 Exonic hg19 NA DA612754 Out-of-frame Intra-chr q42.3 q42.3 116675 ChimerSeq ChiTaRs ChiTaRs GSK3B-CARM1 GSK3B chr3 119813244 CARM1 chr19 10982488 Exonic hg19 NA BE883384 Out-of-frame Inter-chr q13.33 CMGC:GSK Tumor suppressor gene p13.2 116676 ChimerSeq ChiTaRs ChiTaRs SNHG3-NSMCE2 SNHG3 chr1 28834675 NSMCE2 chr8 126369460 Exonic hg19 NA BM850764 5'UTR-CDS Inter-chr p35.3 q24.13 116677 ChimerSeq ChiTaRs ChiTaRs CDC73-ABL1 CDC73 chr1 193171694 ABL1 chr9 133608574 Exonic hg19 NA CV329774 Out-of-frame Inter-chr q31.2 Oncogene Tumor suppressor gene q34.12 TK:Abl Oncogene 116678 ChimerSeq ChiTaRs ChiTaRs PCNXL2-PCNXL2 PCNXL2 chr1 233372273 PCNXL2 chr1 233383816 Exonic hg19 NA CB856604 Out-of-frame Intra-chr 116679 ChimerSeq ChiTaRs ChiTaRs CRIP3-CRIP3 CRIP3 chr6 43275481 CRIP3 chr6 43275369 Exonic hg19 NA BX294224 Out-of-frame Intra-chr p21.1 p21.1 116680 ChimerSeq ChiTaRs ChiTaRs CEBPZ-KRT19 CEBPZ chr2 37458722 KRT19 chr17 39681224 Exonic hg19 NA BM838174 Out-of-frame Inter-chr p22.2 Transcription factor q21.2 Tumor suppressor gene 116681 ChimerSeq ChiTaRs ChiTaRs AMPH-SPANXA2-OT1 AMPH chr7 38442210 SPANXA2-OT1 chrX 140698953 Exonic hg19 NA AW873264 Out-of-frame Inter-chr p14.1 q27.2 116682 ChimerSeq ChiTaRs ChiTaRs WDR60-WDR60 WDR60 chr7 158702048 WDR60 chr7 158701578 Exonic hg19 NA CB045894 Out-of-frame Intra-chr q36.3 q36.3 116683 ChimerSeq ChiTaRs ChiTaRs C1orf61-ADD1 C1orf61 chr1 156378403 ADD1 chr4 2895630 Exonic hg19 NA D44764 Out-of-frame Inter-chr q22 p16.3 116684 ChimerSeq ChiTaRs ChiTaRs NCKAP5-NCKAP5 NCKAP5 chr2 133925383 NCKAP5 chr2 133925876 Exonic hg19 NA DW422984 Out-of-frame Intra-chr q21.2 q21.2 116685 ChimerSeq ChiTaRs ChiTaRs SBF2-EXT2 SBF2 chr11 10061662 EXT2 chr11 44266705 Exonic hg19 NA T17444 Out-of-frame Intra-chr p15.4 p11.2 Oncogene Tumor suppressor gene 116686 ChimerSeq ChiTaRs ChiTaRs PBX2-TUBB4A PBX2 chr6 3505293 TUBB4A chr19 6494464 Exonic hg19 NA BI035864 Out-of-frame Inter-chr p21.32 Transcription factor p13.3 116687 ChimerSeq ChiTaRs ChiTaRs FJX1-WTIP FJX1 chr11 35642413 WTIP chr19 34991860 Exonic hg19 NA BC033654 Out-of-frame Inter-chr p13 q13.11 116688 ChimerSeq ChiTaRs ChiTaRs SH3RF3-PPP1R16B SH3RF3 chr2 109795464 PPP1R16B chr20 37547693 Exonic hg19 NA DA407504 Out-of-frame Inter-chr q13 q11.23 116689 ChimerSeq ChiTaRs ChiTaRs ENO1-ENO1 ENO1 chr1 8923000 ENO1 chr1 8923302 Exonic hg19 NA AW882184 Out-of-frame Intra-chr p36.23 p36.23 116690 ChimerSeq ChiTaRs ChiTaRs FYB-FYB FYB chr5 39105997 FYB chr5 39105975 Exonic hg19 NA BE840894 Out-of-frame Intra-chr p13.1 p13.1 116691 ChimerSeq ChiTaRs ChiTaRs ATG7-SKAP2 ATG7 chr3 11473623 SKAP2 chr7 26707614 Exonic hg19 NA BX095644 Out-of-frame Inter-chr p25.3 p15.2 116692 ChimerSeq ChiTaRs ChiTaRs APOB-SLBP APOB chr2 21262094 SLBP chr4 1699179 Exonic hg19 NA BX091114 Out-of-frame Inter-chr p24.1 p16.3 116693 ChimerSeq ChiTaRs ChiTaRs CUTA-RPS23 CUTA chr6 4866157 RPS23 chr5 81569969 Exonic hg19 NA H17554 Out-of-frame Inter-chr q14.2 116694 ChimerSeq ChiTaRs ChiTaRs TCF7-MTPAP TCF7 chr5 133482975 MTPAP chr10 30599006 Exonic hg19 NA CN411934 Out-of-frame Inter-chr q31.1 Transcription factor p11.23 116695 ChimerSeq ChiTaRs ChiTaRs SMPD4-MDH1 SMPD4 chr2 130939150 MDH1 chr2 63821620 Exonic hg19 NA AW951984 Out-of-frame Intra-chr q21.1 p15 116696 ChimerSeq ChiTaRs ChiTaRs STARD7-STARD7 STARD7 chr2 96861157 STARD7 chr2 96852381 Exonic hg19 NA BI087484 Out-of-frame Intra-chr q11.2 q11.2 116697 ChimerSeq ChiTaRs ChiTaRs ARHGAP26-ARHGAP26 ARHGAP26 chr5 142500626 ARHGAP26 chr5 142513626 Exonic hg19 NA BF765404 Out-of-frame Intra-chr q31.3 q31.3 116698 ChimerSeq ChiTaRs ChiTaRs ENO1-ENO1 ENO1 chr1 8938698 ENO1 chr1 8926450 Exonic hg19 NA CN406714 Out-of-frame Intra-chr p36.23 p36.23 116699 ChimerSeq ChiTaRs ChiTaRs CHTOP-CHTOP CHTOP chr1 153617682 CHTOP chr1 153617775 Exonic hg19 NA CA428774 Out-of-frame Intra-chr q21.3 q21.3 116700 ChimerSeq ChiTaRs ChiTaRs HINT1-HINT1 HINT1 chr5 130495247 HINT1 chr5 130494987 Exonic hg19 NA U51004 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene 116701 ChimerSeq ChiTaRs ChiTaRs TTN-MRPL34 TTN chr2 179554605 MRPL34 chr19 17417227 Exonic hg19 NA Z19494 Out-of-frame Inter-chr q31.2 CAMK:MLCK p13.11 116702 ChimerSeq ChiTaRs ChiTaRs FYTTD1-COL1A1 FYTTD1 chr3 197500348 COL1A1 chr17 48272824 Exonic hg19 NA CN342164 Out-of-frame Inter-chr q29 q21.33 Oncogene 116703 ChimerSeq ChiTaRs ChiTaRs SP140-DGKI SP140 chr2 231118497 DGKI chr7 137498017 Exonic hg19 NA BF357704 Out-of-frame Inter-chr q37.1 Transcription factor q33 116704 ChimerSeq ChiTaRs ChiTaRs PHPT1-DLK1 PHPT1 chr9 139745476 DLK1 chr14 101200394 Exonic hg19 NA DB295254 Out-of-frame Inter-chr q34.3 q32.2 Tumor suppressor gene 116705 ChimerSeq ChiTaRs ChiTaRs XXYLT1-PLCD4 XXYLT1 chr3 194878912 PLCD4 chr2 219498978 Exonic hg19 NA CV404934 Out-of-frame Inter-chr q29 q35 116706 ChimerSeq ChiTaRs ChiTaRs SZT2-SZT2 SZT2 chr1 43913274 SZT2 chr1 43913540 Exonic hg19 NA BI011824 Out-of-frame Intra-chr p34.2 p34.2 116707 ChimerSeq ChiTaRs ChiTaRs SPEG-ZNF622 SPEG chr2 220358351 ZNF622 chr5 16465340 Exonic hg19 NA Z28494 Out-of-frame Inter-chr q35 CAMK:Trio p15.1 116708 ChimerSeq ChiTaRs ChiTaRs CPSF3L-CPSF3L CPSF3L chr1 1250803 CPSF3L chr1 1250231 Exonic hg19 NA BY799464 Out-of-frame Intra-chr 116709 ChimerSeq ChiTaRs ChiTaRs EFHC1-PRCC EFHC1 chr6 52344934 PRCC chr1 156759406 Exonic hg19 NA AW974574 Out-of-frame Inter-chr p12.2 q23.1 116710 ChimerSeq ChiTaRs ChiTaRs SGPP2-FAM13A SGPP2 chr2 223298545 FAM13A chr4 89673550 Exonic hg19 NA AW847114 Out-of-frame Inter-chr q36.1 q22.1 116711 ChimerSeq ChiTaRs ChiTaRs HAUS7-H19 HAUS7 chrX 152770780 H19 chr11 2018703 Exonic hg19 NA DA451864 Out-of-frame Inter-chr q28 p15.5 Tumor suppressor gene 116712 ChimerSeq ChiTaRs ChiTaRs KLHL7-CRKL KLHL7 chr7 23181871 CRKL chr22 21306542 Exonic hg19 NA D44954 Out-of-frame Inter-chr p15.3 q11.21 Oncogene 116713 ChimerSeq ChiTaRs ChiTaRs MR1-MR1 MR1 chr1 181030940 MR1 chr1 181030942 Exonic hg19 NA CD240364 Out-of-frame Intra-chr q25.3 q25.3 116714 ChimerSeq ChiTaRs ChiTaRs NEK11-DBNL NEK11 chr3 130901108 DBNL chr7 44100863 Exonic hg19 NA AW835124 Out-of-frame Inter-chr q22.1 Other:NEK p13 116715 ChimerSeq ChiTaRs ChiTaRs WDR41-WDR41 WDR41 chr5 76759052 WDR41 chr5 76745585 Exonic hg19 NA BE694334 Out-of-frame Intra-chr q14.1 q14.1 116716 ChimerSeq ChiTaRs ChiTaRs PLEKHG1-PLEKHG1 PLEKHG1 chr6 151056604 PLEKHG1 chr6 151057452 Exonic hg19 NA N64224 Out-of-frame Intra-chr q25.1 q25.1 116717 ChimerSeq ChiTaRs ChiTaRs TMEM158-RYR1 TMEM158 chr3 45266302 RYR1 chr19 38996470 Exonic hg19 NA BE764194 Out-of-frame Inter-chr p21.31 q13.2 116718 ChimerSeq ChiTaRs ChiTaRs GALNT13-GALNT13 GALNT13 chr2 155100733 GALNT13 chr2 155099822 Exonic hg19 NA DW462544 Out-of-frame Intra-chr q23.3 q23.3 116719 ChimerSeq ChiTaRs ChiTaRs SELENBP1-SELENBP1 SELENBP1 chr1 151345179 SELENBP1 chr1 151338055 Exonic hg19 NA BP289484 Out-of-frame Intra-chr q21.3 Tumor suppressor gene q21.3 Tumor suppressor gene 116720 ChimerSeq ChiTaRs ChiTaRs PAPPA-PAPPA PAPPA chr9 119162079 PAPPA chr9 119161274 Exonic hg19 NA BF085994 Out-of-frame Intra-chr q33.1 q33.1 116721 ChimerSeq ChiTaRs ChiTaRs ANKRD17-ANKRD17 ANKRD17 chr4 74099493 ANKRD17 chr4 74099316 Exonic hg19 NA CV423794 Out-of-frame Intra-chr q13.3 q13.3 116722 ChimerSeq ChiTaRs ChiTaRs PGC-PGC PGC chr6 41705502 PGC chr6 41710075 Exonic hg19 NA AW863384 Out-of-frame Intra-chr p21.1 p21.1 116723 ChimerSeq ChiTaRs ChiTaRs CDK13-CDK13 CDK13 chr7 40127876 CDK13 chr7 40133997 Exonic hg19 NA BE767414 Out-of-frame Intra-chr p14.1 p14.1 116724 ChimerSeq ChiTaRs ChiTaRs BAZ1B-FNIP2 BAZ1B chr7 72891663 FNIP2 chr4 159707199 Exonic hg19 NA BE771024 Out-of-frame Inter-chr q11.23 q32.1 116725 ChimerSeq ChiTaRs ChiTaRs SETD2-SETD2 SETD2 chr3 47074671 SETD2 chr3 47076859 Exonic hg19 NA DW413064 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 Oncogene Tumor suppressor gene 116726 ChimerSeq ChiTaRs ChiTaRs ZFAND3-TBC1D5 ZFAND3 chr6 38120202 TBC1D5 chr3 17630289 Exonic hg19 NA BF378124 Out-of-frame Inter-chr p21.2 p24.3 116727 ChimerSeq ChiTaRs ChiTaRs HECA-FMO4 HECA chr6 139501673 FMO4 chr1 171308728 Exonic hg19 NA BI010334 Out-of-frame Inter-chr q24.1 Tumor suppressor gene q24.3 116728 ChimerSeq ChiTaRs ChiTaRs PPP1R9A-MDM4 PPP1R9A chr7 94789006 MDM4 chr1 204522210 Exonic hg19 NA DA416644 Out-of-frame Inter-chr q21.3 q32.1 Oncogene 116729 ChimerSeq ChiTaRs ChiTaRs RBM6-BCR RBM6 chr3 50000120 BCR chr22 23530035 Exonic hg19 NA CN425514 Out-of-frame Inter-chr p21.31 Tumor suppressor gene q11.23 Atypical:BCR Oncogene Tumor suppressor gene 116730 ChimerSeq ChiTaRs ChiTaRs TGFBR3-BCL2L2-PABPN1 TGFBR3 chr1 92174445 BCL2L2-PABPN1 chr14 23793477 Exonic hg19 NA BX099284 Out-of-frame Inter-chr p22.1 Tumor suppressor gene q11.2 Oncogene 116731 ChimerSeq ChiTaRs ChiTaRs MAGED2-MAGED2 MAGED2 chrX 54841216 MAGED2 chrX 54838588 Exonic hg19 NA DB569084 Out-of-frame Intra-chr p11.21 p11.21 116732 ChimerSeq ChiTaRs ChiTaRs C7orf49-LOC653739 C7orf49 chr7 134850195 LOC653739 chr7 134832825 Exonic hg19 NA BI837834 Out-of-frame Intra-chr q33 116733 ChimerSeq ChiTaRs ChiTaRs NUDCD1-NUDCD1 NUDCD1 chr8 110253311 NUDCD1 chr8 110255123 Exonic hg19 NA DW451734 Out-of-frame Intra-chr q23.1 q23.1 116734 ChimerSeq ChiTaRs ChiTaRs NKTR-NKTR NKTR chr3 42680850 NKTR chr3 42680867 Exonic hg19 NA BF360014 Out-of-frame Intra-chr p22.1 p22.1 116735 ChimerSeq ChiTaRs ChiTaRs ASAH1-PCM1 ASAH1 chr8 17942311 PCM1 chr8 17817523 Exonic hg19 NA DB239554 Out-of-frame Intra-chr p22 p22 116736 ChimerSeq ChiTaRs ChiTaRs GTF3C2-GTF3C2 GTF3C2 chr2 27552391 GTF3C2 chr2 27552043 Exonic hg19 NA BF736664 Out-of-frame Intra-chr p23.3 p23.3 116737 ChimerSeq ChiTaRs ChiTaRs COL5A2-PTPRD COL5A2 chr2 190044477 PTPRD chr9 10078514 Exonic hg19 NA BC086874 Out-of-frame Inter-chr q32.2 Oncogene Tumor suppressor gene 116738 ChimerSeq ChiTaRs ChiTaRs RANBP9-RANBP9 RANBP9 chr6 13632687 RANBP9 chr6 13632378 Exonic hg19 NA BE835314 Out-of-frame Intra-chr p23 Tumor suppressor gene p23 Tumor suppressor gene 116739 ChimerSeq ChiTaRs ChiTaRs ZIC1-ZIC1 ZIC1 chr3 147128875 ZIC1 chr3 147127317 Exonic hg19 NA U79264 Out-of-frame Intra-chr q24 Tumor suppressor gene Transcription factor q24 Tumor suppressor gene Transcription factor 116740 ChimerSeq ChiTaRs ChiTaRs GORASP1-GORASP1 GORASP1 chr3 39139539 GORASP1 chr3 39139780 Exonic hg19 NA BP260684 Out-of-frame Intra-chr p22.2 p22.2 116741 ChimerSeq ChiTaRs ChiTaRs SNHG15-SNHG15 SNHG15 chr7 45022678 SNHG15 chr7 45022698 Exonic hg19 NA CF127244 Out-of-frame Intra-chr p13 p13 116742 ChimerSeq ChiTaRs ChiTaRs UBAP2-LOC100128288 UBAP2 chr9 33971535 LOC100128288 chr17 8263259 Exonic hg19 NA BE174324 Out-of-frame Inter-chr p13.3 116743 ChimerSeq ChiTaRs ChiTaRs NOD1-NOD1 NOD1 chr7 30469118 NOD1 chr7 30464147 Exonic hg19 NA CB163924 Out-of-frame Intra-chr p14.3 p14.3 116744 ChimerSeq ChiTaRs ChiTaRs SF3B1-FCER1G SF3B1 chr2 198283672 FCER1G chr1 161188738 Exonic hg19 NA BI014364 Out-of-frame Inter-chr q33.1 Oncogene q23.3 116745 ChimerSeq ChiTaRs ChiTaRs PRKDC-PRKDC PRKDC chr8 48777304 PRKDC chr8 48769798 Exonic hg19 NA W28344 Out-of-frame Intra-chr q11.21 Oncogene q11.21 Oncogene 116746 ChimerSeq ChiTaRs ChiTaRs PARD3B-GNGT1 PARD3B chr2 205874410 GNGT1 chr7 93515859 Exonic hg19 NA BM983864 Out-of-frame Inter-chr q33.3 q21.3 116747 ChimerSeq ChiTaRs ChiTaRs NCBP2-GDF9 NCBP2 chr3 196662515 GDF9 chr5 132202339 Exonic hg19 NA F01144 Out-of-frame Inter-chr q29 q31.1 116748 ChimerSeq ChiTaRs ChiTaRs SSFA2-SSFA2 SSFA2 chr2 182795136 SSFA2 chr2 182794675 Exonic hg19 NA CN353414 Out-of-frame Intra-chr q31.3 q31.3 116749 ChimerSeq ChiTaRs ChiTaRs CAMTA1-ENTPD6 CAMTA1 chr1 7538492 ENTPD6 chr20 25195538 Exonic hg19 NA DB118034 Out-of-frame Inter-chr p36.31 Tumor suppressor gene Transcription factor p11.21 116750 ChimerSeq ChiTaRs ChiTaRs TMEM56-DDOST TMEM56 chr1 95639966 DDOST chr1 20978617 Exonic hg19 NA BF306134 Out-of-frame Intra-chr p21.3 p36.12 116751 ChimerSeq ChiTaRs ChiTaRs NBPF9-NBPF11 NBPF9 chr1 145075989 NBPF11 chr1 147917467 Exonic hg19 NA BC110294 Out-of-frame Intra-chr q21.2 q21.2 116752 ChimerSeq ChiTaRs ChiTaRs MFSD3-MFSD3 MFSD3 chr8 145735813 MFSD3 chr8 145735790 Exonic hg19 NA BI821314 Out-of-frame Intra-chr q24.3 q24.3 116753 ChimerSeq ChiTaRs ChiTaRs TSPAN14-YWHAH TSPAN14 chr10 82279841 YWHAH chr22 32352815 Exonic hg19 NA AW903844 Out-of-frame Inter-chr q23.1 q12.3 116754 ChimerSeq ChiTaRs ChiTaRs ATP6V1C1-ATP6V1C1 ATP6V1C1 chr8 104068158 ATP6V1C1 chr8 104063282 Exonic hg19 NA BF350724 Out-of-frame Intra-chr q22.3 q22.3 116755 ChimerSeq ChiTaRs ChiTaRs VPS13B-CUL4B VPS13B chr8 100849280 CUL4B chrX 119694133 Exonic hg19 NA DA405414 Out-of-frame Inter-chr q22.2 q24 116756 ChimerSeq ChiTaRs ChiTaRs TTC37-RBPMS TTC37 chr5 94799929 RBPMS chr8 30326639 Exonic hg19 NA DB308334 Out-of-frame Inter-chr q15 p12 116757 ChimerSeq ChiTaRs ChiTaRs SVIL-SVIL SVIL chr10 29980688 SVIL chr10 29990672 Exonic hg19 NA BF356804 Out-of-frame Intra-chr p11.23 p11.23 116758 ChimerSeq ChiTaRs ChiTaRs YAE1D1-YAE1D1 YAE1D1 chr7 39612038 YAE1D1 chr7 39612163 Exonic hg19 NA AW819974 Out-of-frame Intra-chr p14.1 p14.1 116759 ChimerSeq ChiTaRs ChiTaRs PLP2-PLP2 PLP2 chrX 49031338 PLP2 chrX 49029539 Exonic hg19 NA BE762364 Out-of-frame Intra-chr p11.23 p11.23 116760 ChimerSeq ChiTaRs ChiTaRs TRA2A-HMGB2 TRA2A chr7 23547135 HMGB2 chr4 174253164 Exonic hg19 NA BF093914 Out-of-frame Inter-chr p15.3 q34.1 116761 ChimerSeq ChiTaRs ChiTaRs YWHAZ-DYRK1A YWHAZ chr8 101961402 DYRK1A chr21 38741268 Exonic hg19 NA AW860114 Out-of-frame Inter-chr q22.3 q22.13 CMGC:DYRK 116762 ChimerSeq ChiTaRs ChiTaRs CDYL-ZZZ3 CDYL chr6 4739546 ZZZ3 chr1 78036110 Exonic hg19 NA BE042764 Out-of-frame Inter-chr p25.1 p31.1 Transcription factor 116763 ChimerSeq ChiTaRs ChiTaRs ZEB2-PLCG1 ZEB2 chr2 145271818 PLCG1 chr20 39800849 Exonic hg19 NA AW894554 Out-of-frame Inter-chr q22.3 Transcription factor q12 Oncogene 116764 ChimerSeq ChiTaRs ChiTaRs SAR1B-KLF12 SAR1B chr5 133938949 KLF12 chr13 74263123 Exonic hg19 NA CN421624 Out-of-frame Inter-chr q31.1 q22.1 Transcription factor 116765 ChimerSeq ChiTaRs ChiTaRs SCAF8-LATS1 SCAF8 chr6 155085646 LATS1 chr6 150002102 Exonic hg19 NA BE006984 Out-of-frame Intra-chr q25.2 q25.1 AGC:NDR Tumor suppressor gene 116766 ChimerSeq ChiTaRs ChiTaRs KCNQ1-KCNQ1 KCNQ1 chr11 2466668 KCNQ1 chr11 2466646 Exonic hg19 NA U89364 Out-of-frame Intra-chr p15.5 p15.5 116767 ChimerSeq ChiTaRs ChiTaRs MUC3A-IL32 MUC3A chr7 100610911 IL32 chr16 3117597 Exonic hg19 NA BE842884 Out-of-frame Inter-chr q22.1 p13.3 116768 ChimerSeq ChiTaRs ChiTaRs CD59-CD59 CD59 chr11 33730470 CD59 chr11 33730582 Exonic hg19 NA BM968544 Out-of-frame Intra-chr p13 p13 116769 ChimerSeq ChiTaRs ChiTaRs SMNDC1-DAZAP2 SMNDC1 chr10 112058483 DAZAP2 chr12 51637019 Exonic hg19 NA AW844104 Out-of-frame Inter-chr q25.2 q13.13 116770 ChimerSeq ChiTaRs ChiTaRs COX6C-FURIN COX6C chr8 100899775 FURIN chr15 91426006 Exonic hg19 NA T10274 Out-of-frame Inter-chr q22.2 q26.1 116771 ChimerSeq ChiTaRs ChiTaRs NKIRAS1-NKIRAS1 NKIRAS1 chr3 23962280 NKIRAS1 chr3 23961703 Exonic hg19 NA BE540744 Out-of-frame Intra-chr p24.2 p24.2 116772 ChimerSeq ChiTaRs ChiTaRs TMPRSS11B-LCLAT1 TMPRSS11B chr4 69094533 LCLAT1 chr2 30692054 Exonic hg19 NA BF354474 Out-of-frame Inter-chr q13.2 p23.1 116773 ChimerSeq ChiTaRs ChiTaRs GORASP2-GORASP2 GORASP2 chr2 171822361 GORASP2 chr2 171811182 Exonic hg19 NA W26854 Out-of-frame Intra-chr q31.1 q31.1 116774 ChimerSeq ChiTaRs ChiTaRs APBB2-NKIRAS1 APBB2 chr4 41017979 NKIRAS1 chr3 23961845 Exonic hg19 NA BE172914 Out-of-frame Inter-chr p13 p24.2 116775 ChimerSeq ChiTaRs ChiTaRs S100A13-S100A13 S100A13 chr1 153599671 S100A13 chr1 153599693 Exonic hg19 NA CN281544 Out-of-frame Intra-chr q21.3 q21.3 116776 ChimerSeq ChiTaRs ChiTaRs CYB561D2-CYB561D2 CYB561D2 chr3 50388917 CYB561D2 chr3 50388509 Exonic hg19 NA BI019234 Out-of-frame Intra-chr p21.31 Tumor suppressor gene p21.31 Tumor suppressor gene 116777 ChimerSeq ChiTaRs ChiTaRs ENO1-ENO1 ENO1 chr1 8921293 ENO1 chr1 8921064 Exonic hg19 NA BI088704 Out-of-frame Intra-chr p36.23 p36.23 116778 ChimerSeq ChiTaRs ChiTaRs ADAM12-ADAM12 ADAM12 chr10 127818971 ADAM12 chr10 127816912 Exonic hg19 NA DB302554 Out-of-frame Intra-chr q26.2 q26.2 116779 ChimerSeq ChiTaRs ChiTaRs DSP-SAMD4A DSP chr6 7562940 SAMD4A chr14 55171429 Exonic hg19 NA BE939914 Out-of-frame Inter-chr p24.3 Tumor suppressor gene q22.2 116780 ChimerSeq ChiTaRs ChiTaRs WDR1-WDR1 WDR1 chr4 10118502 WDR1 chr4 10079481 Exonic hg19 NA DB480484 Out-of-frame Intra-chr p16.1 p16.1 116781 ChimerSeq ChiTaRs ChiTaRs FAM84A-LARP1 FAM84A chr2 14776030 LARP1 chr5 154196810 Exonic hg19 NA AW953744 Out-of-frame Inter-chr p24.3 q33.2 116782 ChimerSeq ChiTaRs ChiTaRs RPS6-RPS6 RPS6 chr9 19377274 RPS6 chr9 19376844 Exonic hg19 NA AW970974 Out-of-frame Intra-chr p22.1 p22.1 116783 ChimerSeq ChiTaRs ChiTaRs SRGN-ALAS1 SRGN chr10 70855374 ALAS1 chr3 52248225 Exonic hg19 NA BE826074 Out-of-frame Inter-chr q22.1 p21.2 116784 ChimerSeq ChiTaRs ChiTaRs CAV1-IQGAP2 CAV1 chr7 116184415 IQGAP2 chr5 76003107 Exonic hg19 NA BE930754 Out-of-frame Inter-chr q31.2 Tumor suppressor gene q13.3 Tumor suppressor gene 116785 ChimerSeq ChiTaRs ChiTaRs PDE4D-KCTD2 PDE4D chr5 58883950 KCTD2 chr17 73059857 Exonic hg19 NA DA522054 Out-of-frame Inter-chr q12.1 q25.1 116786 ChimerSeq ChiTaRs ChiTaRs PLOD3-PLOD3 PLOD3 chr7 100855857 PLOD3 chr7 100852212 Exonic hg19 NA BF340804 Out-of-frame Intra-chr q22.1 q22.1 116787 ChimerSeq ChiTaRs ChiTaRs CFH-TP53INP1 CFH chr1 196644936 TP53INP1 chr8 95938964 Exonic hg19 NA AW959894 Out-of-frame Inter-chr q31.3 q22.1 Tumor suppressor gene 116788 ChimerSeq ChiTaRs ChiTaRs SPARCL1-SYNPR SPARCL1 chr4 88416168 SYNPR chr3 63502681 Exonic hg19 NA AW894814 Out-of-frame Inter-chr q22.1 Tumor suppressor gene p14.2 116789 ChimerSeq ChiTaRs ChiTaRs BTK-CYB561D1 BTK chrX 100635468 CYB561D1 chr1 110042114 Exonic hg19 NA BE047734 Out-of-frame Inter-chr q22.1 TK:Tec Oncogene Tumor suppressor gene p13.3 116790 ChimerSeq ChiTaRs ChiTaRs FAM69A-ZNF664 FAM69A chr1 93423947 ZNF664 chr12 124471548 Exonic hg19 NA L44454 Out-of-frame Inter-chr p22.1 q24.31 Transcription factor 116791 ChimerSeq ChiTaRs ChiTaRs MORN1-FAM110A MORN1 chr1 2284259 FAM110A chr20 820044 Exonic hg19 NA BC004334 Out-of-frame Inter-chr p36.32 p13 116792 ChimerSeq ChiTaRs ChiTaRs LDB2-ATL2 LDB2 chr4 16823368 ATL2 chr2 38591809 Exonic hg19 NA R06104 Out-of-frame Inter-chr p15.32 p22.1 116793 ChimerSeq ChiTaRs ChiTaRs LIPA-LIPA LIPA chr10 90974799 LIPA chr10 91005524 Exonic hg19 NA BP300794 Out-of-frame Intra-chr q23.31 q23.31 116794 ChimerSeq ChiTaRs ChiTaRs ASPH-ASPH ASPH chr8 62596762 ASPH chr8 62593527 Exonic hg19 NA BE089554 Out-of-frame Intra-chr q12.3 q12.3 116795 ChimerSeq ChiTaRs ChiTaRs EPC2-RNF111 EPC2 chr2 149519492 RNF111 chr15 59350706 Exonic hg19 NA BF329244 Out-of-frame Inter-chr q23.1 q22.1 Tumor suppressor gene 116796 ChimerSeq ChiTaRs ChiTaRs EHMT1-EHMT1 EHMT1 chr9 140722106 EHMT1 chr9 140721670 Exonic hg19 NA CV420354 Out-of-frame Intra-chr q34.3 q34.3 116797 ChimerSeq ChiTaRs ChiTaRs GNB2L1-ATP1A1 GNB2L1 chr5 180670894 ATP1A1 chr1 116943531 Exonic hg19 NA BC021034 Out-of-frame Inter-chr Tumor suppressor gene p13.1 116798 ChimerSeq ChiTaRs ChiTaRs OSBPL9-BTF3L4 OSBPL9 chr1 52554018 BTF3L4 chr1 52553646 Exonic hg19 NA BM461494 Out-of-frame Intra-chr p32.3 p32.3 116799 ChimerSeq ChiTaRs ChiTaRs RNF220-EP300 RNF220 chr1 45109589 EP300 chr22 41545970 Exonic hg19 NA BF766544 Out-of-frame Inter-chr p34.1 q13.2 Oncogene 116800 ChimerSeq ChiTaRs ChiTaRs KAT6B-SDF4 KAT6B chr10 76788745 SDF4 chr1 1164117 Exonic hg19 NA BE938394 Out-of-frame Inter-chr Oncogene p36.33 116801 ChimerSeq ChiTaRs ChiTaRs CYB561D1-CYB561D1 CYB561D1 chr1 110041355 CYB561D1 chr1 110040942 Exonic hg19 NA CV376024 Out-of-frame Intra-chr p13.3 p13.3 116802 ChimerSeq ChiTaRs ChiTaRs MIR548F1-MIR548F1 MIR548F1 chr1 186373152 MIR548F1 chr1 186373432 Exonic hg19 NA AW967474 Out-of-frame Intra-chr q21.1 q21.1 116803 ChimerSeq ChiTaRs ChiTaRs ABCC5-ATN1 ABCC5 chr3 183643388 ATN1 chr12 7045390 Exonic hg19 NA CN409264 Out-of-frame Inter-chr q27.1 p13.31 116804 ChimerSeq ChiTaRs ChiTaRs SSR1-SSR1 SSR1 chr6 7283987 SSR1 chr6 7285112 Exonic hg19 NA BM728644 Out-of-frame Intra-chr p24.3 p24.3 116805 ChimerSeq ChiTaRs ChiTaRs MPP7-LOC400533 MPP7 chr10 28582370 LOC400533 chr16 34981096 Exonic hg19 NA CV379883 Out-of-frame Inter-chr p12.1 116806 ChimerSeq ChiTaRs ChiTaRs PRPS2-PRPS2 PRPS2 chrX 12831135 PRPS2 chrX 12826240 Exonic hg19 NA CD358573 Out-of-frame Intra-chr p22.2 p22.2 116807 ChimerSeq ChiTaRs ChiTaRs PDLIM5-HIRA PDLIM5 chr4 95565625 HIRA chr22 19429810 Exonic hg19 NA BX106213 Out-of-frame Inter-chr q22.3 q11.21 Tumor suppressor gene 116808 ChimerSeq ChiTaRs ChiTaRs SPARC-SPARC SPARC chr5 151042725 SPARC chr5 151041997 Exonic hg19 NA BU188303 Out-of-frame Intra-chr q33.1 Tumor suppressor gene q33.1 Tumor suppressor gene 116809 ChimerSeq ChiTaRs ChiTaRs MTCH1-MTCH1 MTCH1 chr6 36936601 MTCH1 chr6 36935965 Exonic hg19 NA BI764733 Out-of-frame Intra-chr p21.2 p21.2 116810 ChimerSeq ChiTaRs ChiTaRs PDE4D-PDE4D PDE4D chr5 59495702 PDE4D chr5 59495678 Exonic hg19 NA BF367933 Out-of-frame Intra-chr q12.1 q12.1 116811 ChimerSeq ChiTaRs ChiTaRs MIR548G-MIR548G MIR548G chr3 99514709 MIR548G chr3 99514745 Exonic hg19 NA BG938623 Out-of-frame Intra-chr q31.22 q31.22 116812 ChimerSeq ChiTaRs ChiTaRs TAGLN3-SNRPD2 TAGLN3 chr3 111732732 SNRPD2 chr19 46190955 Exonic hg19 NA AI338353 Out-of-frame Inter-chr q13.2 q13.32 116813 ChimerSeq ChiTaRs ChiTaRs KIF1B-GALNT11 KIF1B chr1 10441146 GALNT11 chr7 151810452 Exonic hg19 NA AA776153 Out-of-frame Inter-chr p36.22 Tumor suppressor gene q36.1 116814 ChimerSeq ChiTaRs ChiTaRs MTA2-PTMA MTA2 chr11 62361372 PTMA chr2 232576100 Exonic hg19 NA BF541543 Out-of-frame Inter-chr q12.3 q37.1 116815 ChimerSeq ChiTaRs ChiTaRs APTX-SLC50A1 APTX chr9 32976023 SLC50A1 chr1 155111221 Exonic hg19 NA AW630763 Out-of-frame Inter-chr p21.1 q22 116816 ChimerSeq ChiTaRs ChiTaRs DLG5-RHOBTB3 DLG5 chr10 79565457 RHOBTB3 chr5 95129724 Exonic hg19 NA BQ367403 Out-of-frame Inter-chr q22.3 q15 116817 ChimerSeq ChiTaRs ChiTaRs ADAM19-HPD ADAM19 chr5 156907969 HPD chr12 122285045 Exonic hg19 NA CD614163 Out-of-frame Inter-chr q33.3 q24.31 116818 ChimerSeq ChiTaRs ChiTaRs RPL10-IQGAP2 RPL10 chrX 153629254 IQGAP2 chr5 75715629 Exonic hg19 NA AI499133 Out-of-frame Inter-chr q28 Tumor suppressor gene q13.3 Tumor suppressor gene 116819 ChimerSeq ChiTaRs ChiTaRs FLNA-FLNA FLNA chrX 153593088 FLNA chrX 153594479 Exonic hg19 NA BF733973 Out-of-frame Intra-chr q28 Tumor suppressor gene q28 Tumor suppressor gene 116820 ChimerSeq ChiTaRs ChiTaRs SYAP1-SLC5A5 SYAP1 chrX 16780931 SLC5A5 chr19 18005291 Exonic hg19 NA BM690623 Out-of-frame Inter-chr p22.2 p13.11 116821 ChimerSeq ChiTaRs ChiTaRs LINC00461-WBSCR22 LINC00461 chr5 87976786 WBSCR22 chr7 73118484 Exonic hg19 NA DA292433 Out-of-frame Inter-chr q14.3 116822 ChimerSeq ChiTaRs ChiTaRs PPP1R15B-PPP1R15B PPP1R15B chr1 204372694 PPP1R15B chr1 204372990 Exonic hg19 NA CV574393 Out-of-frame Intra-chr q32.1 q32.1 116823 ChimerSeq ChiTaRs ChiTaRs BUD31-AGAP2 BUD31 chr7 99017235 AGAP2 chr12 58124013 Exonic hg19 NA AI300543 Out-of-frame Inter-chr q22.1 q14.1 116824 ChimerSeq ChiTaRs ChiTaRs RGS17-ATF3 RGS17 chr6 153418582 ATF3 chr1 212793902 Exonic hg19 NA CF552913 Out-of-frame Inter-chr q25.2 q32.3 Tumor suppressor gene Transcription factor 116825 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-PLCD1 INS-IGF2 chr11 2153997 PLCD1 chr3 38053505 Exonic hg19 NA CN404773 Out-of-frame Inter-chr p15.5 p22.2 Oncogene 116826 ChimerSeq ChiTaRs ChiTaRs WDR70-EIF2S3 WDR70 chr5 37389308 EIF2S3 chrX 24095045 Exonic hg19 NA BM969453 Out-of-frame Inter-chr p13.2 p22.11 116827 ChimerSeq ChiTaRs ChiTaRs UFC1-NPIPB7 UFC1 chr1 161128645 NPIPB7 chr16 28975358 Exonic hg19 NA AW628133 Out-of-frame Inter-chr q23.3 p12.1 116828 ChimerSeq ChiTaRs ChiTaRs MAP1B-MAP1B MAP1B chr5 71491222 MAP1B chr5 71500970 Exonic hg19 NA DB382833 Out-of-frame Intra-chr q13.2 q13.2 116829 ChimerSeq ChiTaRs ChiTaRs PAPSS1-RAB13 PAPSS1 chr4 108603264 RAB13 chr1 153955055 Exonic hg19 NA DA811913 Out-of-frame Inter-chr q25 q21.3 116830 ChimerSeq ChiTaRs ChiTaRs RXRA-LRBA RXRA chr9 137332431 LRBA chr4 151283588 Exonic hg19 NA BM978893 3'UTR-CDS Inter-chr q34.2 Transcription factor q31.3 116831 ChimerSeq ChiTaRs ChiTaRs PDCD4-PDCD4 PDCD4 chr10 112658418 PDCD4 chr10 112658082 Exonic hg19 NA AA742923 Out-of-frame Intra-chr q25.2 Tumor suppressor gene q25.2 Tumor suppressor gene 116832 ChimerSeq ChiTaRs ChiTaRs VPS37A-VCAM1 VPS37A chr8 17153068 VCAM1 chr1 101203799 Exonic hg19 NA AI276643 Out-of-frame Inter-chr p22 p21.2 116833 ChimerSeq ChiTaRs ChiTaRs SETD7-FBN1 SETD7 chr4 140450347 FBN1 chr15 48800841 Exonic hg19 NA AW609923 Out-of-frame Inter-chr q31.1 q21.1 116834 ChimerSeq ChiTaRs ChiTaRs KIF21B-PPIG KIF21B chr1 200938883 PPIG chr2 170440954 Exonic hg19 NA U40763 Out-of-frame Inter-chr q32.1 q31.1 116835 ChimerSeq ChiTaRs ChiTaRs DSP-DSP DSP chr6 7583152 DSP chr6 7582934 Exonic hg19 NA EL594873 Out-of-frame Intra-chr p24.3 Tumor suppressor gene p24.3 Tumor suppressor gene 116836 ChimerSeq ChiTaRs ChiTaRs NOV-UTY NOV chr8 120435634 UTY chrY 15507683 Exonic hg19 NA BE705923 Out-of-frame Inter-chr q24.12 Tumor suppressor gene q11.221 116837 ChimerSeq ChiTaRs ChiTaRs PDK3-PDK3 PDK3 chrX 24568583 PDK3 chrX 24568157 Exonic hg19 NA BU674003 3'UTR-3'UTR Intra-chr p22.11 p22.11 116838 ChimerSeq ChiTaRs ChiTaRs CMTM7-FLNA CMTM7 chr3 32475519 FLNA chrX 153580770 Exonic hg19 NA BF094113 Out-of-frame Inter-chr p22.3 q28 Tumor suppressor gene 116839 ChimerSeq ChiTaRs ChiTaRs TSPAN5-NACA TSPAN5 chr4 99491372 NACA chr12 57106930 Exonic hg19 NA BF155703 Out-of-frame Inter-chr q23 q13.3 116840 ChimerSeq ChiTaRs ChiTaRs CDKN1C-PLXDC2 CDKN1C chr11 2904945 PLXDC2 chr10 20238286 Exonic hg19 NA AI028513 Out-of-frame Inter-chr Tumor suppressor gene p12.31 116841 ChimerSeq ChiTaRs ChiTaRs CTNNA1-CTNNA1 CTNNA1 chr5 138269882 CTNNA1 chr5 138269843 Exonic hg19 NA BE713143 Out-of-frame Intra-chr q31.2 Oncogene q31.2 Oncogene 116842 ChimerSeq ChiTaRs ChiTaRs RFK-LYZ RFK chr9 79009266 LYZ chr12 69747527 Exonic hg19 NA BC015473 Out-of-frame Inter-chr q21.13 q15 116843 ChimerSeq ChiTaRs ChiTaRs SELENBP1-C7orf10 SELENBP1 chr1 151338136 C7orf10 chr7 40633775 Exonic hg19 NA AW881693 Out-of-frame Inter-chr q21.3 Tumor suppressor gene 116844 ChimerSeq ChiTaRs ChiTaRs PSMD1-PSMD1 PSMD1 chr2 232035428 PSMD1 chr2 231927240 Exonic hg19 NA DA454373 Out-of-frame Intra-chr q37.1 q37.1 116845 ChimerSeq ChiTaRs ChiTaRs CCDC88A-MLLT4-AS1 CCDC88A chr2 55528463 MLLT4-AS1 chr6 168225172 Exonic hg19 NA HE805695 Out-of-frame Inter-chr p16.1 116846 ChimerSeq ChiTaRs ChiTaRs RLIM-LRRC24 RLIM chrX 73805493 LRRC24 chr8 145751605 Exonic hg19 NA BM678243 Out-of-frame Inter-chr q13.2 q24.3 116847 ChimerSeq ChiTaRs ChiTaRs PRPS2-PRPS2 PRPS2 chrX 12842248 PRPS2 chrX 12841610 Exonic hg19 NA BE767033 Out-of-frame Intra-chr p22.2 p22.2 116848 ChimerSeq ChiTaRs ChiTaRs SMG5-DIDO1 SMG5 chr1 156246960 DIDO1 chr20 61541148 Exonic hg19 NA BQ335493 Out-of-frame Inter-chr q22 q13.33 Tumor suppressor gene 116849 ChimerSeq ChiTaRs ChiTaRs SH3BP2-SH3BP2 SH3BP2 chr4 2831270 SH3BP2 chr4 2826796 Exonic hg19 NA BI009363 Out-of-frame Intra-chr p16.3 p16.3 116850 ChimerSeq ChiTaRs ChiTaRs MKLN1-MKLN1 MKLN1 chr7 131180753 MKLN1 chr7 131180749 Exonic hg19 NA BQ188123 Out-of-frame Intra-chr q32.3 q32.3 116851 ChimerSeq ChiTaRs ChiTaRs TMEM50A-TMEM50A TMEM50A chr1 25679404 TMEM50A chr1 25664907 Exonic hg19 NA BF352913 Out-of-frame Intra-chr p36.11 p36.11 116852 ChimerSeq ChiTaRs ChiTaRs GRM8-GRM8 GRM8 chr7 126861322 GRM8 chr7 126860852 Exonic hg19 NA EL585323 Out-of-frame Intra-chr q31.33 Oncogene q31.33 Oncogene 116853 ChimerSeq ChiTaRs ChiTaRs C11orf58-SDHAF2 C11orf58 chr11 16777430 SDHAF2 chr11 61213487 Exonic hg19 NA H67313 Out-of-frame Intra-chr p15.2 q12.2 116854 ChimerSeq ChiTaRs ChiTaRs PCDH7-MIB1 PCDH7 chr4 30954117 MIB1 chr18 19341429 Exonic hg19 NA BX111823 Out-of-frame Inter-chr p15.1 q11.2 116855 ChimerSeq ChiTaRs ChiTaRs FBXW4-SLC16A1 FBXW4 chr10 103387585 SLC16A1 chr1 113489160 Exonic hg19 NA BI050753 Out-of-frame Inter-chr q24.32 116856 ChimerSeq ChiTaRs ChiTaRs CEBPZ-ECD CEBPZ chr2 37440933 ECD chr10 74896568 Exonic hg19 NA AW372223 Out-of-frame Inter-chr p22.2 Transcription factor q22.2 116857 ChimerSeq ChiTaRs ChiTaRs MYD88-ARHGEF10L MYD88 chr3 38183004 ARHGEF10L chr1 18014061 Exonic hg19 NA BE161373 Out-of-frame Inter-chr p22.2 Oncogene p36.13 116858 ChimerSeq ChiTaRs ChiTaRs MIR1256-MIR1256 MIR1256 chr10 74128114 MIR1256 chr10 74127227 Exonic hg19 NA BM919493 Out-of-frame Intra-chr p36.12 p36.12 116859 ChimerSeq ChiTaRs ChiTaRs ADCY1-ADCY1 ADCY1 chr7 45758918 ADCY1 chr7 45757167 Exonic hg19 NA AU252813 Out-of-frame Intra-chr p12.3 p12.3 116860 ChimerSeq ChiTaRs ChiTaRs STAU2-STAU2 STAU2 chr8 74391938 STAU2 chr8 74392641 Exonic hg19 NA BE143523 Out-of-frame Intra-chr q21.11 q21.11 116861 ChimerSeq ChiTaRs ChiTaRs ERI3-YIPF3 ERI3 chr1 44762670 YIPF3 chr6 43480836 Exonic hg19 NA BI051573 Out-of-frame Inter-chr p34.1 p21.1 116862 ChimerSeq ChiTaRs ChiTaRs SPTBN1-ERBB2IP SPTBN1 chr2 54888099 ERBB2IP chr5 65315562 Exonic hg19 NA BQ346413 Out-of-frame Inter-chr p16.2 Tumor suppressor gene 116863 ChimerSeq ChiTaRs ChiTaRs CRIM1-SYNRG CRIM1 chr2 36691731 SYNRG chr17 35902508 Exonic hg19 NA BG013273 Out-of-frame Inter-chr p22.2 116864 ChimerSeq ChiTaRs ChiTaRs PUSL1-MLXIPL PUSL1 chr1 1247203 MLXIPL chr7 73014062 Exonic hg19 NA AI739073 Out-of-frame Inter-chr p36.33 q11.23 Transcription factor 116865 ChimerSeq ChiTaRs ChiTaRs SLC20A2-SLC20A2 SLC20A2 chr8 42384674 SLC20A2 chr8 42384640 Exonic hg19 NA AA665033 Out-of-frame Intra-chr p11.21 p11.21 116866 ChimerSeq ChiTaRs ChiTaRs PRRC2C-CSTF1 PRRC2C chr1 171560452 CSTF1 chr20 54968937 Exonic hg19 NA AW003943 Out-of-frame Inter-chr q24.3 q13.2 116867 ChimerSeq ChiTaRs ChiTaRs DFNB31-PITPNB DFNB31 chr9 117181140 PITPNB chr22 28256302 Exonic hg19 NA BQ314453 Out-of-frame Inter-chr q12.1 116868 ChimerSeq ChiTaRs ChiTaRs PSMD2-PSMD2 PSMD2 chr3 184018176 PSMD2 chr3 184018205 Exonic hg19 NA BE003023 Out-of-frame Intra-chr q27.1 q27.1 116869 ChimerSeq ChiTaRs ChiTaRs PLA2G2A-MLLT4 PLA2G2A chr1 20301994 MLLT4 chr6 168352363 Exonic hg19 NA CB050783 Out-of-frame Inter-chr p36.13 Tumor suppressor gene 116870 ChimerSeq ChiTaRs ChiTaRs PRPF18-CACNA1B PRPF18 chr10 13682973 CACNA1B chr9 140973491 Exonic hg19 NA BF957293 Out-of-frame Inter-chr p13 q34.3 116871 ChimerSeq ChiTaRs ChiTaRs RPL36A-HNRNPH2-HNRNPR RPL36A-HNRNPH2 chrX 100667970 HNRNPR chr1 23637420 Exonic hg19 NA BI005433 Out-of-frame Inter-chr q22.1 116872 ChimerSeq ChiTaRs ChiTaRs TCERG1-TCERG1 TCERG1 chr5 145872573 TCERG1 chr5 145838785 Exonic hg19 NA BU622083 Out-of-frame Intra-chr q32 q32 116873 ChimerSeq ChiTaRs ChiTaRs ARID4B-TM9SF2 ARID4B chr1 235397054 TM9SF2 chr13 100214995 Exonic hg19 NA BI032633 Out-of-frame Inter-chr q42.3 q32.3 116874 ChimerSeq ChiTaRs ChiTaRs ARFGAP2-SH3GL2 ARFGAP2 chr11 47186135 SH3GL2 chr9 17796930 Exonic hg19 NA BG987713 Out-of-frame Inter-chr p11.2 p22.2 116875 ChimerSeq ChiTaRs ChiTaRs ATP11C-ATP11C ATP11C chrX 138824213 ATP11C chrX 138823531 Exonic hg19 NA BE082683 Out-of-frame Intra-chr q27.1 q27.1 116876 ChimerSeq ChiTaRs ChiTaRs SLIT2-SLIT2 SLIT2 chr4 20535269 SLIT2 chr4 20525713 Exonic hg19 NA BF996463 Out-of-frame Intra-chr p15.31 Tumor suppressor gene p15.31 Tumor suppressor gene 116877 ChimerSeq ChiTaRs ChiTaRs MLLT3-MLL MLLT3 chr9 20360029 MLL chr11 118353475 Exonic hg19 NA AY840550 Out-of-frame Inter-chr p21.3 q23.3 116878 ChimerSeq ChiTaRs ChiTaRs PCDH1-PCDH1 PCDH1 chr5 141244225 PCDH1 chr5 141243991 Exonic hg19 NA BF997693 Out-of-frame Intra-chr q31.3 q31.3 116879 ChimerSeq ChiTaRs ChiTaRs PAQR7-XIAP PAQR7 chr1 26188267 XIAP chrX 123044223 Exonic hg19 NA AI861853 Out-of-frame Inter-chr p36.11 q25 116880 ChimerSeq ChiTaRs ChiTaRs SFTPB-AK3 SFTPB chr2 85888881 AK3 chr9 4719210 Exonic hg19 NA BF850323 Out-of-frame Inter-chr p11.2 p24.1 116881 ChimerSeq ChiTaRs ChiTaRs SOX6-SOX6 SOX6 chr11 16220003 SOX6 chr11 16221974 Exonic hg19 NA AF147423 Out-of-frame Intra-chr p15.2 Transcription factor p15.2 Transcription factor 116882 ChimerSeq ChiTaRs ChiTaRs PTBP2-AUTS2 PTBP2 chr1 97189150 AUTS2 chr7 70240341 Exonic hg19 NA DA721803 CDS-3'UTR Inter-chr p21.3 q11.22 116883 ChimerSeq ChiTaRs ChiTaRs C5orf45-RUNDC3A C5orf45 chr5 179275517 RUNDC3A chr17 42391285 Exonic hg19 NA DA250813 Out-of-frame Inter-chr q21.31 116884 ChimerSeq ChiTaRs ChiTaRs PRLR-RHOG PRLR chr5 35093504 RHOG chr11 3848547 Exonic hg19 NA AW389483 Out-of-frame Inter-chr p13.2 p15.4 116885 ChimerSeq ChiTaRs ChiTaRs CPSF3-CPSF3 CPSF3 chr2 9595830 CPSF3 chr2 9597081 Exonic hg19 NA CB135523 Out-of-frame Intra-chr p25.1 p25.1 116886 ChimerSeq ChiTaRs ChiTaRs GPM6B-GPM6B GPM6B chrX 13791626 GPM6B chrX 13797938 Exonic hg19 NA AU118413 Out-of-frame Intra-chr p22.2 p22.2 116887 ChimerSeq ChiTaRs ChiTaRs SREK1-SREK1 SREK1 chr5 65466696 SREK1 chr5 65466736 Exonic hg19 NA AI961243 Out-of-frame Intra-chr q12.3 q12.3 116888 ChimerSeq ChiTaRs ChiTaRs RNF11-RNF11 RNF11 chr1 51738777 RNF11 chr1 51738161 Exonic hg19 NA AI859563 Out-of-frame Intra-chr p32.3 p32.3 116889 ChimerSeq ChiTaRs ChiTaRs CACNA2D1-CACNA2D1 CACNA2D1 chr7 81692757 CACNA2D1 chr7 81693573 Exonic hg19 NA DW417283 Out-of-frame Intra-chr q21.11 q21.11 116890 ChimerSeq ChiTaRs ChiTaRs SPP1-ANXA2 SPP1 chr4 88904055 ANXA2 chr15 60657754 Exonic hg19 NA BQ314733 Out-of-frame Inter-chr q22.1 q22.2 116891 ChimerSeq ChiTaRs ChiTaRs IMMP2L-KIRREL IMMP2L chr7 110434813 KIRREL chr1 158063127 Exonic hg19 NA BG003223 Out-of-frame Inter-chr q31.1 q23.1 116892 ChimerSeq ChiTaRs ChiTaRs ANP32B-PTPN11 ANP32B chr9 100745731 PTPN11 chr12 112856741 Exonic hg19 NA BG826823 Out-of-frame Inter-chr q22.33 q24.13 Oncogene Tumor suppressor gene 116893 ChimerSeq ChiTaRs ChiTaRs MTA3-KCNMA1 MTA3 chr2 42952029 KCNMA1 chr10 78762805 Exonic hg19 NA M85843 Out-of-frame Inter-chr p21 q22.3 116894 ChimerSeq ChiTaRs ChiTaRs SLC35B2-SLC35B2 SLC35B2 chr6 44222366 SLC35B2 chr6 44223318 Exonic hg19 NA DB500953 Out-of-frame Intra-chr p21.1 p21.1 116895 ChimerSeq ChiTaRs ChiTaRs CBLB-TPD52 CBLB chr3 105582241 TPD52 chr8 80961073 Exonic hg19 NA BG982213 Out-of-frame Inter-chr q13.11 q21.13 116896 ChimerSeq ChiTaRs ChiTaRs ZNF32-AS3-ZNF32-AS3 ZNF32-AS3 chr10 44139595 ZNF32-AS3 chr10 44139310 Exonic hg19 NA BG389643 Out-of-frame Intra-chr q11.21 Transcription factor q11.21 Tumor suppressor gene 116897 ChimerSeq ChiTaRs ChiTaRs CRIM1-RNF170 CRIM1 chr2 36671230 RNF170 chr8 42740924 Exonic hg19 NA AF282861 Out-of-frame Inter-chr p22.2 p11.21 116898 ChimerSeq ChiTaRs ChiTaRs ZZZ3-MCL1 ZZZ3 chr1 78084361 MCL1 chr1 150548241 Exonic hg19 NA AW802833 Out-of-frame Intra-chr p31.1 Transcription factor q21.2 Oncogene 116899 ChimerSeq ChiTaRs ChiTaRs CLK4-ATP2C1 CLK4 chr5 178043544 ATP2C1 chr3 130699121 Exonic hg19 NA BE698743 Out-of-frame Inter-chr q35.3 CMGC:CLK q22.1 116900 ChimerSeq ChiTaRs ChiTaRs PIN4-ABCF2 PIN4 chrX 71406391 ABCF2 chr7 150910597 Exonic hg19 NA BU858833 Out-of-frame Inter-chr q13.1 q36.1 116901 ChimerSeq ChiTaRs ChiTaRs IKBKAP-MARK3 IKBKAP chr9 111695768 MARK3 chr14 103932177 Exonic hg19 NA BE073873 Out-of-frame Inter-chr q31.3 q32.32 CAMK:CAMKL 116902 ChimerSeq ChiTaRs ChiTaRs STK3-MKL1 STK3 chr8 99481091 MKL1 chr22 40830092 Exonic hg19 NA AW867773 Out-of-frame Inter-chr q22.2 q13.2 116903 ChimerSeq ChiTaRs ChiTaRs MTR-PGM5 MTR chr1 236965122 PGM5 chr9 71047627 Exonic hg19 NA BG986763 Out-of-frame Inter-chr q43 Oncogene q21.11 116904 ChimerSeq ChiTaRs ChiTaRs ZCCHC4-PTPN14 ZCCHC4 chr4 25331432 PTPN14 chr1 214524175 Exonic hg19 NA BQ380533 Out-of-frame Inter-chr p15.2 q41 116905 ChimerSeq ChiTaRs ChiTaRs GLIPR2-GLIPR2 GLIPR2 chr9 36163901 GLIPR2 chr9 36163794 Exonic hg19 NA AI828773 Out-of-frame Intra-chr p13.3 p13.3 116906 ChimerSeq ChiTaRs ChiTaRs SRSF4-AES SRSF4 chr1 29475338 AES chr19 3053440 Exonic hg19 NA BF739153 Out-of-frame Inter-chr p35.3 p13.3 116907 ChimerSeq ChiTaRs ChiTaRs PCOLCE-PCOLCE PCOLCE chr7 100205396 PCOLCE chr7 100205561 Exonic hg19 NA BI496353 Out-of-frame Intra-chr q22.1 q22.1 116908 ChimerSeq ChiTaRs ChiTaRs RGS5-SPIN1 RGS5 chr1 163209027 SPIN1 chr9 91069884 Exonic hg19 NA CA440173 Out-of-frame Inter-chr q23.3 q22.1 116909 ChimerSeq ChiTaRs ChiTaRs SHC1-SHC1 SHC1 chr1 154938694 SHC1 chr1 154938483 Exonic hg19 NA R19703 Out-of-frame Intra-chr q21.3 q21.3 116910 ChimerSeq ChiTaRs ChiTaRs FAM83A-FAM83A FAM83A chr8 124195571 FAM83A chr8 124194921 Exonic hg19 NA AF497803 Out-of-frame Intra-chr q24.13 q24.13 116911 ChimerSeq ChiTaRs ChiTaRs SPARCL1-SPARCL1 SPARCL1 chr4 88415479 SPARCL1 chr4 88414789 Exonic hg19 NA BF222593 Out-of-frame Intra-chr q22.1 Tumor suppressor gene q22.1 Tumor suppressor gene 116912 ChimerSeq ChiTaRs ChiTaRs MRPS2-MRPS2 MRPS2 chr9 138396067 MRPS2 chr9 138396049 Exonic hg19 NA BG469853 Out-of-frame Intra-chr q34.3 q34.3 116913 ChimerSeq ChiTaRs ChiTaRs MBTPS2-MLLT4 MBTPS2 chrX 21890399 MLLT4 chr6 168265229 Exonic hg19 NA S82521 Out-of-frame Inter-chr p22.12 116914 ChimerSeq ChiTaRs ChiTaRs SUSD4-CRCT1 SUSD4 chr1 223441875 CRCT1 chr1 152487519 Exonic hg19 NA BE715813 Out-of-frame Intra-chr q41 q21.3 116915 ChimerSeq ChiTaRs ChiTaRs SNHG1-SLC27A5 SNHG1 chr11 62621436 SLC27A5 chr19 59022932 Exonic hg19 NA DA285853 Out-of-frame Inter-chr q12.3 q13.43 116916 ChimerSeq ChiTaRs ChiTaRs NBPF11-NBPF14 NBPF11 chr1 147931812 NBPF14 chr1 145042446 Exonic hg19 NA BP229923 Out-of-frame Intra-chr q21.2 q21.2 116917 ChimerSeq ChiTaRs ChiTaRs CYP1B1-CYP1B1 CYP1B1 chr2 38295406 CYP1B1 chr2 38295434 Exonic hg19 NA AW958883 Out-of-frame Intra-chr p22.2 p22.2 116918 ChimerSeq ChiTaRs ChiTaRs C6orf89-SH3PXD2A C6orf89 chr6 36891302 SH3PXD2A chr10 105356873 Exonic hg19 NA AI962613 Out-of-frame Inter-chr p21.2 q24.33 116919 ChimerSeq ChiTaRs ChiTaRs PSMB7-MARCH1 PSMB7 chr9 127119158 2001_ 3_ 1_ chr4 164585083 Exonic hg19 NA BF969613 Out-of-frame Inter-chr q33.3 116920 ChimerSeq ChiTaRs ChiTaRs STK19-STK19 STK19 chr6 3282623 STK19 chr6 3362502 Exonic hg19 NA K02403 Out-of-frame Intra-chr 116921 ChimerSeq ChiTaRs ChiTaRs HERPUD2-RASA4 HERPUD2 chr7 35673104 RASA4 chr7 102331484 Exonic hg19 NA BG149613 Out-of-frame Intra-chr p14.2 q22.1 116922 ChimerSeq ChiTaRs ChiTaRs IGFBP5-IGFBP5 IGFBP5 chr2 217539008 IGFBP5 chr2 217539794 Exonic hg19 NA W00663 Out-of-frame Intra-chr q35 Tumor suppressor gene q35 Tumor suppressor gene 116923 ChimerSeq ChiTaRs ChiTaRs RTN4-RTN4 RTN4 chr2 55237438 RTN4 chr2 55209769 Exonic hg19 NA W27023 Out-of-frame Intra-chr p16.1 Tumor suppressor gene p16.1 Tumor suppressor gene 116924 ChimerSeq ChiTaRs ChiTaRs RAG2-BACH2 RAG2 chr11 36619771 BACH2 chr6 90798680 Exonic hg19 NA BM152333 Out-of-frame Inter-chr p12 q15 Transcription factor 116925 ChimerSeq ChiTaRs ChiTaRs MAN1A2-MAN1A2 MAN1A2 chr1 117957454 MAN1A2 chr1 117944807 Exonic hg19 NA DW434893 Out-of-frame Intra-chr p12 p12 116926 ChimerSeq ChiTaRs ChiTaRs RGPD6-VSIG10 RGPD6 chr2 110609992 VSIG10 chr12 118511622 Exonic hg19 NA BQ303873 Out-of-frame Inter-chr q13 q24.23 116927 ChimerSeq ChiTaRs ChiTaRs TRAF2-DENND1C TRAF2 chr9 139820247 DENND1C chr19 6475907 Exonic hg19 NA BI031313 Out-of-frame Inter-chr q34.3 Tumor suppressor gene p13.3 116928 ChimerSeq ChiTaRs ChiTaRs CRY2-RTN4 CRY2 chr11 45904316 RTN4 chr2 55200047 Exonic hg19 NA BE835303 Out-of-frame Inter-chr p11.2 p16.1 Tumor suppressor gene 116929 ChimerSeq ChiTaRs ChiTaRs PJA2-PJA2 PJA2 chr5 108672746 PJA2 chr5 108672236 Exonic hg19 NA CN307923 Out-of-frame Intra-chr q21.3 q21.3 116930 ChimerSeq ChiTaRs ChiTaRs ATP6V1C2-ATP6V1C2 ATP6V1C2 chr2 10924887 ATP6V1C2 chr2 10924665 Exonic hg19 NA BE840913 Out-of-frame Intra-chr p25.1 p25.1 116931 ChimerSeq ChiTaRs ChiTaRs U2SURP-U2SURP U2SURP chr3 142741476 U2SURP chr3 142731169 Exonic hg19 NA BE080133 Out-of-frame Intra-chr q23 q23 116932 ChimerSeq ChiTaRs ChiTaRs REST-SART3 REST chr4 57800138 SART3 chr12 108954626 Exonic hg19 NA DB293893 Out-of-frame Inter-chr q12 Transcription factor q23.3 116933 ChimerSeq ChiTaRs ChiTaRs GRK5-PTPRE GRK5 chr10 120998561 PTPRE chr10 129825728 Exonic hg19 NA BF846763 Out-of-frame Intra-chr q26.11 q26.2 116934 ChimerSeq ChiTaRs ChiTaRs SAT1-SAT1 SAT1 chrX 23804326 SAT1 chrX 23803945 Exonic hg19 NA W31613 Out-of-frame Intra-chr p22.11 p22.11 116935 ChimerSeq ChiTaRs ChiTaRs ACTL6A-XPC ACTL6A chr3 179289150 XPC chr3 14187579 Exonic hg19 NA BE147953 Out-of-frame Intra-chr q26.33 p25.1 Oncogene 116936 ChimerSeq ChiTaRs ChiTaRs MAP7D3-MAP7D3 MAP7D3 chrX 135323438 MAP7D3 chrX 135326931 Exonic hg19 NA AK022463 Out-of-frame Intra-chr q26.3 q26.3 116937 ChimerSeq ChiTaRs ChiTaRs CBLB-CBLB CBLB chr3 105377486 CBLB chr3 105377489 Exonic hg19 NA BF840733 Out-of-frame Intra-chr q13.11 q13.11 116938 ChimerSeq ChiTaRs ChiTaRs MRPS25-SEC23B MRPS25 chr3 15093835 SEC23B chr20 18505151 Exonic hg19 NA N22743 Out-of-frame Inter-chr p25.1 p11.23 116939 ChimerSeq ChiTaRs ChiTaRs PDS5A-PDS5A PDS5A chr4 39867233 PDS5A chr4 39865708 Exonic hg19 NA CK822313 Out-of-frame Intra-chr p14 p14 116940 ChimerSeq ChiTaRs ChiTaRs TNK2-RNF187 TNK2 chr3 195623032 RNF187 chr1 228682475 Exonic hg19 NA AJ713023 Out-of-frame Inter-chr q29 Oncogene q42.13 116941 ChimerSeq ChiTaRs ChiTaRs AUTS2-OAF AUTS2 chr7 70002755 OAF chr11 120100537 Exonic hg19 NA R99623 Out-of-frame Inter-chr q11.22 q23.3 116942 ChimerSeq ChiTaRs ChiTaRs PUS10-PIK3R4 PUS10 chr2 61167643 PIK3R4 chr3 130452782 Exonic hg19 NA BM987763 Out-of-frame Inter-chr p15 q22.1 Other:VPS15 116943 ChimerSeq ChiTaRs ChiTaRs RAPGEF1-MALAT1 RAPGEF1 chr9 134573581 MALAT1 chr11 65269729 Exonic hg19 NA BF935963 Out-of-frame Inter-chr q34.13 q13.1 116944 ChimerSeq ChiTaRs ChiTaRs LOC100128993-GNAI2 LOC100128993 chr8 19102424 GNAI2 chr3 50294486 Exonic hg19 NA DB337573 Out-of-frame Inter-chr p21.31 116945 ChimerSeq ChiTaRs ChiTaRs LPXN-PAM16 LPXN chr11 58294572 PAM16 chr16 4394810 Exonic hg19 NA AA829953 Out-of-frame Inter-chr q12.1 p13.3 116946 ChimerSeq ChiTaRs ChiTaRs LINC00461-LINC00461 LINC00461 chr5 87962559 LINC00461 chr5 87960399 Exonic hg19 NA AI633853 Out-of-frame Intra-chr q14.3 q14.3 116947 ChimerSeq ChiTaRs ChiTaRs TMEM56-RWDD3-TMEM56-RWDD3 TMEM56-RWDD3 chr1 95706187 TMEM56-RWDD3 chr1 95702438 Exonic hg19 NA CR747913 Out-of-frame Intra-chr p21.3 p21.3 116948 ChimerSeq ChiTaRs ChiTaRs RERE-RERE RERE chr1 8662104 RERE chr1 8661891 Exonic hg19 NA AA878413 Out-of-frame Intra-chr p36.23 p36.23 116949 ChimerSeq ChiTaRs ChiTaRs HK1-GNL1 HK1 chr10 71161765 GNL1 chr6 1846018 Exonic hg19 NA BC048213 Out-of-frame Inter-chr q22.1 116950 ChimerSeq ChiTaRs ChiTaRs MCTP1-MBD5 MCTP1 chr5 94409506 MBD5 chr2 149266788 Exonic hg19 NA BF841033 Out-of-frame Inter-chr q15 q23.1 116951 ChimerSeq ChiTaRs ChiTaRs ATIC-ATIC ATIC chr2 216214487 ATIC chr2 216214262 Exonic hg19 NA BU675973 Out-of-frame Intra-chr q35 q35 116952 ChimerSeq ChiTaRs ChiTaRs PID1-ANKS1B PID1 chr2 229890080 ANKS1B chr12 100015222 Exonic hg19 NA BQ027803 Out-of-frame Inter-chr q36.3 q23.1 116953 ChimerSeq ChiTaRs ChiTaRs HAO2-HAO2 HAO2 chr1 119941320 HAO2 chr1 119934732 Exonic hg19 NA BI759383 3'UTR-CDS Intra-chr p12 p12 116954 ChimerSeq ChiTaRs ChiTaRs NCL-FOXJ3 NCL chr2 232321787 FOXJ3 chr1 42684292 Exonic hg19 NA BF877863 Out-of-frame Inter-chr q37.1 p34.2 Transcription factor 116955 ChimerSeq ChiTaRs ChiTaRs NRP1-WDR75 NRP1 chr10 33496646 WDR75 chr2 190334908 Exonic hg19 NA BE696383 Out-of-frame Inter-chr p11.22 q32.2 116956 ChimerSeq ChiTaRs ChiTaRs LRRC8A-LRRC8A LRRC8A chr9 131679920 LRRC8A chr9 131678719 Exonic hg19 NA BU618193 Out-of-frame Intra-chr q34.11 q34.11 116957 ChimerSeq ChiTaRs ChiTaRs VAV2-TSPO VAV2 chr9 136657671 TSPO chr22 43558793 Exonic hg19 NA BM792193 Out-of-frame Inter-chr q34.2 q13.2 116958 ChimerSeq ChiTaRs ChiTaRs ARID5B-CREB5 ARID5B chr10 63853440 CREB5 chr7 28860388 Exonic hg19 NA BF853813 Out-of-frame Inter-chr q21.2 Transcription factor p15.1 Transcription factor 116959 ChimerSeq ChiTaRs ChiTaRs TMEM2-TMEM2 TMEM2 chr9 74298655 TMEM2 chr9 74299598 Exonic hg19 NA AA782783 Out-of-frame Intra-chr q21.13 q21.13 116960 ChimerSeq ChiTaRs ChiTaRs CUX1-GNAS CUX1 chr7 101838885 GNAS chr20 57470666 Exonic hg19 NA BP249353 CDS-5'UTR Inter-chr q22.1 Tumor suppressor gene Transcription factor q13.32 Oncogene 116961 ChimerSeq ChiTaRs ChiTaRs LMOD1-PAPPA LMOD1 chr1 201897649 PAPPA chr9 118931120 Exonic hg19 NA BG010053 Out-of-frame Inter-chr q32.1 q33.1 116962 ChimerSeq ChiTaRs ChiTaRs ATP1A1-ATP1A1 ATP1A1 chr1 116943528 ATP1A1 chr1 116930050 Exonic hg19 NA CV373603 Out-of-frame Intra-chr p13.1 p13.1 116963 ChimerSeq ChiTaRs ChiTaRs HIST1H2BG-CRMP1 HIST1H2BG chr6 26216916 CRMP1 chr4 5890114 Exonic hg19 NA DA773803 Out-of-frame Inter-chr p22.2 p16.2 116964 ChimerSeq ChiTaRs ChiTaRs CUX1-ACAP2 CUX1 chr7 101602920 ACAP2 chr3 195059261 Exonic hg19 NA BF923523 Out-of-frame Inter-chr q22.1 Tumor suppressor gene Transcription factor q29 116965 ChimerSeq ChiTaRs ChiTaRs TSPAN32-RAB31 TSPAN32 chr11 2338868 RAB31 chr18 9732366 Exonic hg19 NA BI030413 Out-of-frame Inter-chr p15.5 Tumor suppressor gene p11.22 116966 ChimerSeq ChiTaRs ChiTaRs GNGT1-UBE2I GNGT1 chr7 93518535 UBE2I chr16 1375024 Exonic hg19 NA AW995893 Out-of-frame Inter-chr q21.3 p13.3 116967 ChimerSeq ChiTaRs ChiTaRs ANKRD17-ANKRD17 ANKRD17 chr4 73958018 ANKRD17 chr4 73950965 Exonic hg19 NA H24553 Out-of-frame Intra-chr q13.3 q13.3 116968 ChimerSeq ChiTaRs ChiTaRs ARPC1B-ARPC1B ARPC1B chr7 98992225 ARPC1B chr7 98992236 Exonic hg19 NA AA972643 Out-of-frame Intra-chr q22.1 q22.1 116969 ChimerSeq ChiTaRs ChiTaRs ITM2C-RAP1GAP2 ITM2C chr2 231742191 RAP1GAP2 chr17 2898718 Exonic hg19 NA BF918553 Out-of-frame Inter-chr q37.1 p13.3 116970 ChimerSeq ChiTaRs ChiTaRs STAT1-STAT1 STAT1 chr2 191842560 STAT1 chr2 191842046 Exonic hg19 NA BF911413 Out-of-frame Intra-chr q32.2 Tumor suppressor gene Transcription factor q32.2 Tumor suppressor gene Transcription factor 116971 ChimerSeq ChiTaRs ChiTaRs PUS10-LINC00340 PUS10 chr2 61240389 LINC00340 chr6 21940138 Exonic hg19 NA BC060323 Out-of-frame Inter-chr p15 116972 ChimerSeq ChiTaRs ChiTaRs GPX3-GPX3 GPX3 chr5 150407578 GPX3 chr5 150407726 Exonic hg19 NA W25873 Out-of-frame Intra-chr q33.1 Tumor suppressor gene q33.1 Tumor suppressor gene 116973 ChimerSeq ChiTaRs ChiTaRs UBR2-ARL15 UBR2 chr6 42630894 ARL15 chr5 53472665 Exonic hg19 NA BE708433 Out-of-frame Inter-chr p21.1 q11.2 116974 ChimerSeq ChiTaRs ChiTaRs CCR6-WBSCR22 CCR6 chr6 167484032 WBSCR22 chr7 73110180 Exonic hg19 NA BQ375803 Out-of-frame Inter-chr q27 116975 ChimerSeq ChiTaRs ChiTaRs GNAI2-PRKAG1 GNAI2 chr3 50296785 PRKAG1 chr12 49396800 Exonic hg19 NA CK725123 Out-of-frame Inter-chr p21.31 q13.12 116976 ChimerSeq ChiTaRs ChiTaRs TMEM59-TMEM59 TMEM59 chr1 54502387 TMEM59 chr1 54506455 Exonic hg19 NA BU676173 Out-of-frame Intra-chr p32.3 p32.3 116977 ChimerSeq ChiTaRs ChiTaRs PODXL2-LOC100507412 PODXL2 chr3 127391173 LOC100507412 chr? 110287 Exonic hg19 NA BF920673 Out-of-frame Inter-chr q21.3 116978 ChimerSeq ChiTaRs ChiTaRs ZNF438-ZNF438 ZNF438 chr10 31197932 ZNF438 chr10 31165927 Exonic hg19 NA AW893503 Out-of-frame Intra-chr p11.23 Transcription factor p11.23 Transcription factor 116979 ChimerSeq ChiTaRs ChiTaRs NDUFA10-HLA-DQA1 NDUFA10 chr2 240899412 HLA-DQA1 chr6 4042690 Exonic hg19 NA BF854863 Out-of-frame Inter-chr 116980 ChimerSeq ChiTaRs ChiTaRs HNRNPA2B1-HNRNPA2B1 HNRNPA2B1 chr7 26232132 HNRNPA2B1 chr7 26232114 Exonic hg19 NA BF920993 3'UTR-3'UTR Intra-chr p15.2 p15.2 116981 ChimerSeq ChiTaRs ChiTaRs CDH17-CDH17 CDH17 chr8 95186145 CDH17 chr8 95161008 Exonic hg19 NA AW377543 Out-of-frame Intra-chr q22.1 Tumor suppressor gene q22.1 Tumor suppressor gene 116982 ChimerSeq ChiTaRs ChiTaRs FAIM3-TMEM87A FAIM3 chr1 207086860 TMEM87A chr15 42503355 Exonic hg19 NA AK075403 Out-of-frame Inter-chr q15.1 116983 ChimerSeq ChiTaRs ChiTaRs LOC285441-ULK4 LOC285441 chr4 187422212 ULK4 chr3 41953125 Exonic hg19 NA DB094943 5'UTR-CDS Inter-chr p22.1 Other:ULK 116984 ChimerSeq ChiTaRs ChiTaRs HJURP-HJURP HJURP chr2 234749986 HJURP chr2 234750334 Exonic hg19 NA AW393573 Out-of-frame Intra-chr q37.1 q37.1 116985 ChimerSeq ChiTaRs ChiTaRs PSMB7-PDS5B PSMB7 chr9 127171842 PDS5B chr13 33214285 Exonic hg19 NA DW438983 Out-of-frame Inter-chr q33.3 q13.1 Tumor suppressor gene 116986 ChimerSeq ChiTaRs ChiTaRs KDM5C-EPHA6 KDM5C chrX 53230872 EPHA6 chr3 97285140 Exonic hg19 NA AW818623 Out-of-frame Inter-chr p11.22 Oncogene q11.2 116987 ChimerSeq ChiTaRs ChiTaRs ZNF672-ZNF672 ZNF672 chr1 249143713 ZNF672 chr1 249143285 Exonic hg19 NA BF438543 Out-of-frame Intra-chr q44 Transcription factor q44 Transcription factor 116988 ChimerSeq ChiTaRs ChiTaRs CHM-CHM CHM chrX 85218712 CHM chrX 85119491 Exonic hg19 NA M83773 Out-of-frame Intra-chr q21.2 q21.2 116989 ChimerSeq ChiTaRs ChiTaRs DGKI-RBFOX1 DGKI chr7 137079042 RBFOX1 chr16 6809509 Exonic hg19 NA BF948083 Out-of-frame Inter-chr q33 p13.3 116990 ChimerSeq ChiTaRs ChiTaRs GPA33-SOD1 GPA33 chr1 167042668 SOD1 chr21 33031961 Exonic hg19 NA AW376283 Out-of-frame Inter-chr q24.1 q22.11 116991 ChimerSeq ChiTaRs ChiTaRs RUNX1T1-BBX RUNX1T1 chr8 93071184 BBX chr3 107245329 Exonic hg19 NA DQ202697 Out-of-frame Inter-chr q21.3 Oncogene q13.12 Transcription factor 116992 ChimerSeq ChiTaRs ChiTaRs NUDT2-NUDT2 NUDT2 chr9 34343695 NUDT2 chr9 34343186 Exonic hg19 NA N45093 Out-of-frame Intra-chr p13.3 p13.3 116993 ChimerSeq ChiTaRs ChiTaRs PTMA-PBX3 PTMA chr2 232577586 PBX3 chr9 128531861 Exonic hg19 NA AW072773 Out-of-frame Inter-chr q37.1 q33.3 Transcription factor 116994 ChimerSeq ChiTaRs ChiTaRs TF-NEAT1 TF chr3 133462934 NEAT1 chr11 65191227 Exonic hg19 NA BF948793 Out-of-frame Inter-chr q22.1 q13.1 116995 ChimerSeq ChiTaRs ChiTaRs ARPC4-TTLL3-INTS1 ARPC4-TTLL3 chr3 9870713 INTS1 chr7 1528980 Exonic hg19 NA BI046943 Out-of-frame Inter-chr p25.3 p22.3 116996 ChimerSeq ChiTaRs ChiTaRs CFB-CFB CFB chr6 3252570 CFB chr6 3252455 Exonic hg19 NA AI280653 Out-of-frame Intra-chr 116997 ChimerSeq ChiTaRs ChiTaRs NEK10-DCUN1D4 NEK10 chr3 27410852 DCUN1D4 chr4 52726708 Exonic hg19 NA DA119783 Out-of-frame Inter-chr p24.1 Other:NEK q12 116998 ChimerSeq ChiTaRs ChiTaRs NCK2-ATP6V0D1 NCK2 chr2 106481280 ATP6V0D1 chr16 67472002 Exonic hg19 NA BI000173 Out-of-frame Inter-chr q12.2 q22.1 116999 ChimerSeq ChiTaRs ChiTaRs GNAI2-GNAI2 GNAI2 chr3 50294232 GNAI2 chr3 50290505 Exonic hg19 NA BI051043 Out-of-frame Intra-chr p21.31 p21.31 117000 ChimerSeq ChiTaRs ChiTaRs PTPRU-GAB1 PTPRU chr1 29653292 GAB1 chr4 144391820 Exonic hg19 NA AA907583 Out-of-frame Inter-chr p35.3 q31.21 117001 ChimerSeq ChiTaRs ChiTaRs FAIM3-FAIM3 FAIM3 chr1 207077963 FAIM3 chr1 207078351 Exonic hg19 NA AI468023 Out-of-frame Intra-chr 117002 ChimerSeq ChiTaRs ChiTaRs TOX-ZNF543 TOX chr8 60008003 ZNF543 chr19 57840400 Exonic hg19 NA AW629313 Out-of-frame Inter-chr q12.1 q13.43 Transcription factor 117003 ChimerSeq ChiTaRs ChiTaRs HACL1-LRPPRC HACL1 chr3 15602404 LRPPRC chr2 44152205 Exonic hg19 NA DB349473 Out-of-frame Inter-chr p25.1 p21 117004 ChimerSeq ChiTaRs ChiTaRs TNKS1BP1-XCR1 TNKS1BP1 chr11 57075161 XCR1 chr3 46066340 Exonic hg19 NA BM693293 Out-of-frame Inter-chr q12.1 p21.31 117005 ChimerSeq ChiTaRs ChiTaRs CHD1L-XPOT CHD1L chr1 146756091 XPOT chr12 64842307 Exonic hg19 NA CN255653 Out-of-frame Inter-chr q21.1 q14.2 117006 ChimerSeq ChiTaRs ChiTaRs CHCHD3-CPEB3 CHCHD3 chr7 132599669 CPEB3 chr10 93964889 Exonic hg19 NA BF986123 Out-of-frame Inter-chr q33 Transcription factor q23.32 117007 ChimerSeq ChiTaRs ChiTaRs CDC5L-ZNF638 CDC5L chr6 44402160 ZNF638 chr2 71661875 Exonic hg19 NA AF090903 Out-of-frame Inter-chr p21.1 Transcription factor p13.3 117008 ChimerSeq ChiTaRs ChiTaRs HSPA1A-CDKN3 HSPA1A chr6 3079369 CDKN3 chr14 54874845 Exonic hg19 NA DB356803 Out-of-frame Inter-chr q22.2 117009 ChimerSeq ChiTaRs ChiTaRs SNED1-STX12 SNED1 chr2 242223241 STX12 chr1 28112226 Exonic hg19 NA BF379103 Out-of-frame Inter-chr q37.3 p35.3 117010 ChimerSeq ChiTaRs ChiTaRs DNAJC21-AKNAD1 DNAJC21 chr5 34945098 AKNAD1 chr1 109473768 Exonic hg19 NA BF919493 Out-of-frame Inter-chr p13.2 p13.3 117011 ChimerSeq ChiTaRs ChiTaRs NBEAL1-ALS2CR8 NBEAL1 chr2 203922179 ALS2CR8 chr2 203850832 Exonic hg19 NA AK096293 Out-of-frame Intra-chr q33.2 117012 ChimerSeq ChiTaRs ChiTaRs DAGLB-SNAP23 DAGLB chr7 6519698 SNAP23 chr15 42824560 Exonic hg19 NA CB052513 Out-of-frame Inter-chr p22.1 q15.1 117013 ChimerSeq ChiTaRs ChiTaRs ADD1-NEAT1 ADD1 chr4 2930765 NEAT1 chr11 65191906 Exonic hg19 NA BI028313 Out-of-frame Inter-chr p16.3 q13.1 117014 ChimerSeq ChiTaRs ChiTaRs FKBP5-ASPH FKBP5 chr6 35588908 ASPH chr8 62438954 Exonic hg19 NA BE162083 Out-of-frame Inter-chr p21.31 q12.3 117015 ChimerSeq ChiTaRs ChiTaRs CD2AP-CD2AP CD2AP chr6 47445886 CD2AP chr6 47563681 Exonic hg19 NA AI564093 Out-of-frame Intra-chr p12.3 p12.3 117016 ChimerSeq ChiTaRs ChiTaRs CELF2-CELF2 CELF2 chr10 11375699 CELF2 chr10 11374354 Exonic hg19 NA CB218433 Out-of-frame Intra-chr p14 p14 117017 ChimerSeq ChiTaRs ChiTaRs IQCA1-SIK3 IQCA1 chr2 237279338 SIK3 chr11 116933891 Exonic hg19 NA AW772133 Out-of-frame Inter-chr q37.3 q23.3 117018 ChimerSeq ChiTaRs ChiTaRs QTRTD1-FLVCR1 QTRTD1 chr3 113777973 FLVCR1 chr1 213069813 Exonic hg19 NA BF926403 Out-of-frame Inter-chr q32.3 117019 ChimerSeq ChiTaRs ChiTaRs ROBO2-GOLPH3 ROBO2 chr3 76604881 GOLPH3 chr5 32125015 Exonic hg19 NA BM472473 Out-of-frame Inter-chr p12.3 p13.3 117020 ChimerSeq ChiTaRs ChiTaRs ATAD2B-ATG2B ATAD2B chr2 24149926 ATG2B chr14 96751093 Exonic hg19 NA AA580273 Out-of-frame Inter-chr p23.3 q32.2 117021 ChimerSeq ChiTaRs ChiTaRs WDR1-WDR1 WDR1 chr4 10089976 WDR1 chr4 10089979 Exonic hg19 NA BF762373 Out-of-frame Intra-chr p16.1 p16.1 117022 ChimerSeq ChiTaRs ChiTaRs DHX57-FAM219A DHX57 chr2 39088098 FAM219A chr9 34450907 Exonic hg19 NA CV413933 Out-of-frame Inter-chr p22.1 p13.3 117023 ChimerSeq ChiTaRs ChiTaRs ING2-ING2 ING2 chr4 184431456 ING2 chr4 184431767 Exonic hg19 NA AI745293 Out-of-frame Intra-chr q35.1 Tumor suppressor gene q35.1 Tumor suppressor gene 117024 ChimerSeq ChiTaRs ChiTaRs HDAC11-TEAD3 HDAC11 chr3 13546048 TEAD3 chr6 35445131 Exonic hg19 NA BE838173 Out-of-frame Inter-chr p25.1 p21.31 Transcription factor 117025 ChimerSeq ChiTaRs ChiTaRs LPGAT1-PCSK7 LPGAT1 chr1 211972658 PCSK7 chr11 117076940 Exonic hg19 NA AW948393 Out-of-frame Inter-chr q32.3 q23.3 117026 ChimerSeq ChiTaRs ChiTaRs DPP4-CD109 DPP4 chr2 162916134 CD109 chr6 74457249 Exonic hg19 NA BG231728 Out-of-frame Inter-chr q24.2 Tumor suppressor gene q13 117027 ChimerSeq ChiTaRs ChiTaRs HSP90AB1-NAPEPLD HSP90AB1 chr6 44218152 NAPEPLD chr7 102760646 Exonic hg19 NA BP212813 Out-of-frame Inter-chr p21.1 Oncogene Tumor suppressor gene 117028 ChimerSeq ChiTaRs ChiTaRs SESN2-SESN2 SESN2 chr1 28608467 SESN2 chr1 28598892 Exonic hg19 NA CN366113 Out-of-frame Intra-chr p35.3 p35.3 117029 ChimerSeq ChiTaRs ChiTaRs AKIRIN1-SORBS1 AKIRIN1 chr1 39470711 SORBS1 chr10 97244375 Exonic hg19 NA BF925553 Out-of-frame Inter-chr p34.3 q24.1 117030 ChimerSeq ChiTaRs ChiTaRs MICB-BCL11B MICB chr6 2586795 BCL11B chr14 99655740 Exonic hg19 NA EL582473 Out-of-frame Inter-chr q32.2 Oncogene Transcription factor 117031 ChimerSeq ChiTaRs ChiTaRs G3BP1-MCMBP G3BP1 chr5 151184159 MCMBP chr10 121591742 Exonic hg19 NA AW798793 Out-of-frame Inter-chr q33.1 q26.11 117032 ChimerSeq ChiTaRs ChiTaRs BTN3A2-PRSS23 BTN3A2 chr6 26378539 PRSS23 chr11 86659837 Exonic hg19 NA AI927603 Out-of-frame Inter-chr p22.2 q14.2 117033 ChimerSeq ChiTaRs ChiTaRs PI4K2B-PI4K2B PI4K2B chr4 25255306 PI4K2B chr4 25238182 Exonic hg19 NA AW936523 Out-of-frame Intra-chr p15.2 p15.2 117034 ChimerSeq ChiTaRs ChiTaRs GIGYF1-GIGYF1 GIGYF1 chr7 100281207 GIGYF1 chr7 100277541 Exonic hg19 NA BC018563 Out-of-frame Intra-chr q22.1 q22.1 117035 ChimerSeq ChiTaRs ChiTaRs ROPN1-PLXNB3 ROPN1 chr3 123704850 PLXNB3 chrX 153028171 Exonic hg19 NA AW006913 Out-of-frame Inter-chr q21.1 q28 117036 ChimerSeq ChiTaRs ChiTaRs TSPYL5-TSPYL5 TSPYL5 chr8 98289565 TSPYL5 chr8 98288836 Exonic hg19 NA BF934813 Out-of-frame Intra-chr q22.1 q22.1 117037 ChimerSeq ChiTaRs ChiTaRs MCF2-MYB MCF2 chrX 138688390 MYB chr6 135540074 Exonic hg19 NA AI708084 Out-of-frame Inter-chr q27.1 q23.3 Oncogene Transcription factor 117038 ChimerSeq ChiTaRs ChiTaRs BAZ1B-LOC100216546 BAZ1B chr7 72895283 LOC100216546 chr7 104625834 Exonic hg19 NA AW854433 Out-of-frame Intra-chr q11.23 117039 ChimerSeq ChiTaRs ChiTaRs CLIP4-IPO4 CLIP4 chr2 29381597 IPO4 chr14 24658693 Exonic hg19 NA BE179163 Out-of-frame Inter-chr p23.2 q12 117040 ChimerSeq ChiTaRs ChiTaRs TNFRSF1B-SLC30A7 TNFRSF1B chr1 12269285 SLC30A7 chr1 101443102 Exonic hg19 NA BQ003023 Out-of-frame Intra-chr p36.22 p21.2 117041 ChimerSeq ChiTaRs ChiTaRs UBQLN2-UBQLN2 UBQLN2 chrX 56591648 UBQLN2 chrX 56591344 Exonic hg19 NA BF081503 Out-of-frame Intra-chr p11.21 p11.21 117042 ChimerSeq ChiTaRs ChiTaRs SFXN5-MIAT SFXN5 chr2 73286105 MIAT chr22 27065126 Exonic hg19 NA AK098753 Out-of-frame Inter-chr p13.2 q12.1 117043 ChimerSeq ChiTaRs ChiTaRs SH3BGRL3-HCRTR1 SH3BGRL3 chr1 26607975 HCRTR1 chr1 32095983 Exonic hg19 NA AW793853 Out-of-frame Intra-chr p36.11 p35.2 117044 ChimerSeq ChiTaRs ChiTaRs PAPD7-PAPD7 PAPD7 chr5 6719092 PAPD7 chr5 6725631 Exonic hg19 NA DW407603 Out-of-frame Intra-chr p15.31 p15.31 117045 ChimerSeq ChiTaRs ChiTaRs ANXA9-RPS6KA3 ANXA9 chr1 150965882 RPS6KA3 chrX 20226770 Exonic hg19 NA AW006813 Out-of-frame Inter-chr q21.3 p22.12 117046 ChimerSeq ChiTaRs ChiTaRs ZKSCAN1-SVEP1 ZKSCAN1 chr7 99634610 SVEP1 chr9 113228236 Exonic hg19 NA BF996713 Out-of-frame Inter-chr q22.1 Transcription factor q31.3 117047 ChimerSeq ChiTaRs ChiTaRs CHMP2B-CHMP2B CHMP2B chr3 87303374 CHMP2B chr3 87302866 Exonic hg19 NA BU608643 Out-of-frame Intra-chr p11.2 p11.2 117048 ChimerSeq ChiTaRs ChiTaRs USP39-IQCG USP39 chr2 85868229 IQCG chr3 197677059 Exonic hg19 NA CB857203 Out-of-frame Inter-chr p11.2 q29 117049 ChimerSeq ChiTaRs ChiTaRs ACTA1-H19 ACTA1 chr1 229569841 H19 chr11 2017153 Exonic hg19 NA DA897253 Out-of-frame Inter-chr q42.13 p15.5 Tumor suppressor gene 117050 ChimerSeq ChiTaRs ChiTaRs SRSF11-SRSF11 SRSF11 chr1 70710498 SRSF11 chr1 70700410 Exonic hg19 NA BU608483 Out-of-frame Intra-chr p31.1 p31.1 117051 ChimerSeq ChiTaRs ChiTaRs RAPGEF1-LEPROT RAPGEF1 chr9 134466936 LEPROT chr1 65900138 Exonic hg19 NA BF995773 Out-of-frame Inter-chr q34.13 p31.3 117052 ChimerSeq ChiTaRs ChiTaRs LOC100272228-LOC100272228 LOC100272228 chrX 149116607 LOC100272228 chrX 149129097 Exonic hg19 NA BE694373 Out-of-frame Intra-chr 117053 ChimerSeq ChiTaRs ChiTaRs EXOC4-EXOC4 EXOC4 chr7 133750389 EXOC4 chr7 133749993 Exonic hg19 NA AA578413 Out-of-frame Intra-chr q33 q33 117054 ChimerSeq ChiTaRs ChiTaRs SIGMAR1-PNPLA6 SIGMAR1 chr9 34634820 PNPLA6 chr19 7621968 Exonic hg19 NA CB269943 Out-of-frame Inter-chr p13.3 p13.2 117055 ChimerSeq ChiTaRs ChiTaRs SPARCL1-ZNF713 SPARCL1 chr4 88401651 ZNF713 chr7 55991778 Exonic hg19 NA BE843913 Out-of-frame Inter-chr q22.1 Tumor suppressor gene p11.2 Transcription factor 117056 ChimerSeq ChiTaRs ChiTaRs KAZN-GNB1 KAZN chr1 15333569 GNB1 chr1 1819351 Exonic hg19 NA BF510743 Out-of-frame Intra-chr p36.21 p36.33 117057 ChimerSeq ChiTaRs ChiTaRs ATXN1-TBC1D12 ATXN1 chr6 16761690 TBC1D12 chr10 96290953 Exonic hg19 NA DA370353 Out-of-frame Inter-chr p22.3 q23.33 117058 ChimerSeq ChiTaRs ChiTaRs ATP5I-OS9 ATP5I chr4 667171 OS9 chr12 58109687 Exonic hg19 NA AW001413 Out-of-frame Inter-chr p16.3 q13.3 117059 ChimerSeq ChiTaRs ChiTaRs UBQLN2-UBQLN2 UBQLN2 chrX 56593379 UBQLN2 chrX 56593124 Exonic hg19 NA BM969353 Out-of-frame Intra-chr p11.21 p11.21 117060 ChimerSeq ChiTaRs ChiTaRs DHTKD1-IFT122 DHTKD1 chr10 12120016 IFT122 chr3 129192913 Exonic hg19 NA BE072743 Out-of-frame Inter-chr p14 q21.3 117061 ChimerSeq ChiTaRs ChiTaRs ADD1-SLC24A2 ADD1 chr4 2896414 SLC24A2 chr9 19725743 Exonic hg19 NA BI034953 Out-of-frame Inter-chr p16.3 p22.1 117062 ChimerSeq ChiTaRs ChiTaRs PLXNA1-C19orf81 PLXNA1 chr3 126753574 C19orf81 chr19 51162523 Exonic hg19 NA AL162013 Out-of-frame Inter-chr q21.3 q13.33 117063 ChimerSeq ChiTaRs ChiTaRs ATP2B3-PSMD1 ATP2B3 chrX 152835420 PSMD1 chr2 232030589 Exonic hg19 NA BU730843 Out-of-frame Inter-chr q28 q37.1 117064 ChimerSeq ChiTaRs ChiTaRs SRRT-ATP5G3 SRRT chr7 100485703 ATP5G3 chr2 176043785 Exonic hg19 NA BE743393 Out-of-frame Inter-chr q22.1 q31.1 117065 ChimerSeq ChiTaRs ChiTaRs SEC61A1-SEC61A1 SEC61A1 chr3 127789668 SEC61A1 chr3 127788923 Exonic hg19 NA BF748943 Out-of-frame Intra-chr q21.3 q21.3 117066 ChimerSeq ChiTaRs ChiTaRs HMGCR-TP53INP2 HMGCR chr5 74657122 TP53INP2 chr20 33300042 Exonic hg19 NA BF853983 Out-of-frame Inter-chr q13.3 q11.22 117067 ChimerSeq ChiTaRs ChiTaRs PPIEL-YIPF5 PPIEL chr1 40025352 YIPF5 chr5 143540365 Exonic hg19 NA BX473353 Out-of-frame Inter-chr p34.3 q31.3 117068 ChimerSeq ChiTaRs ChiTaRs ZFAT-GSTO2 ZFAT chr8 135627551 GSTO2 chr10 106046882 Exonic hg19 NA BQ369613 Out-of-frame Inter-chr q24.22 Transcription factor q25.1 117069 ChimerSeq ChiTaRs ChiTaRs ATP6V1C2-MDM4 ATP6V1C2 chr2 10912652 MDM4 chr1 204519019 Exonic hg19 NA BI014313 Out-of-frame Inter-chr p25.1 q32.1 Oncogene 117070 ChimerSeq ChiTaRs ChiTaRs BSCL2-RPL22L1 BSCL2 chr11 62473089 RPL22L1 chr3 170584108 Exonic hg19 NA BC049823 3'UTR-3'UTR Inter-chr q12.3 q26.2 117071 ChimerSeq ChiTaRs ChiTaRs CHST13-DKK3 CHST13 chr3 126245529 DKK3 chr11 12020253 Exonic hg19 NA DA162383 Out-of-frame Inter-chr q21.3 p15.3 Tumor suppressor gene 117072 ChimerSeq ChiTaRs ChiTaRs CHRM2-SLC20A2 CHRM2 chr7 136572599 SLC20A2 chr8 42354179 Exonic hg19 NA CV414683 Out-of-frame Inter-chr q33 p11.21 117073 ChimerSeq ChiTaRs ChiTaRs SLC45A3-MLLT1 SLC45A3 chr1 205616219 MLLT1 chr19 6277149 Exonic hg19 NA S81007 Out-of-frame Inter-chr q32.1 p13.3 117074 ChimerSeq ChiTaRs ChiTaRs ARF1-PFN2 ARF1 chr1 228286677 PFN2 chr3 149683697 Exonic hg19 NA M62013 Out-of-frame Inter-chr q42.13 Tumor suppressor gene q25.1 117075 ChimerSeq ChiTaRs ChiTaRs KPNA1-KPNA1 KPNA1 chr3 122152555 KPNA1 chr3 122152566 Exonic hg19 NA BQ312483 Out-of-frame Intra-chr q21.1 q21.1 117076 ChimerSeq ChiTaRs ChiTaRs LDB1-LDB1 LDB1 chr10 103874242 LDB1 chr10 103869200 Exonic hg19 NA AI768373 Out-of-frame Intra-chr q24.32 q24.32 117077 ChimerSeq ChiTaRs ChiTaRs HLA-DRB1-C3 HLA-DRB1 chr6 3721204 C3 chr19 6680201 Exonic hg19 NA BG951453 Out-of-frame Inter-chr p21.32 p13.3 117078 ChimerSeq ChiTaRs ChiTaRs UBXN2A-HORMAD1 UBXN2A chr2 24160088 HORMAD1 chr1 150676591 Exonic hg19 NA BE843543 Out-of-frame Inter-chr p23.3 q21.3 117079 ChimerSeq ChiTaRs ChiTaRs LOC646762-LOC646762 LOC646762 chr7 29690090 LOC646762 chr7 29687507 Exonic hg19 NA AK026723 Out-of-frame Intra-chr 117080 ChimerSeq ChiTaRs ChiTaRs ITSN2-RBM8A ITSN2 chr2 24432803 RBM8A chr1 145511736 Exonic hg19 NA BG999583 Out-of-frame Inter-chr p23.3 q21.1 117081 ChimerSeq ChiTaRs ChiTaRs ADAMTS4-F2R ADAMTS4 chr1 161159878 F2R chr5 76030945 Exonic hg19 NA CA419533 Out-of-frame Inter-chr q23.3 q13.3 117082 ChimerSeq ChiTaRs ChiTaRs PPAP2B-FOXP1 PPAP2B chr1 57002073 FOXP1 chr3 71314236 Exonic hg19 NA CV427513 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor 117083 ChimerSeq ChiTaRs ChiTaRs SV2A-LIMCH1 SV2A chr1 149875217 LIMCH1 chr4 41643447 Exonic hg19 NA AA582263 Out-of-frame Inter-chr q21.2 p13 117084 ChimerSeq ChiTaRs ChiTaRs ASAP2-ASAP2 ASAP2 chr2 9460466 ASAP2 chr2 9517080 Exonic hg19 NA AW295763 Out-of-frame Intra-chr p25.1 p25.1 117085 ChimerSeq ChiTaRs ChiTaRs INS-IGF2-HNRNPA2B1 INS-IGF2 chr11 2150446 HNRNPA2B1 chr7 26236608 Exonic hg19 NA CB218603 Out-of-frame Inter-chr p15.5 p15.2 Oncogene 117086 ChimerSeq ChiTaRs ChiTaRs SLC12A2-SLC12A2 SLC12A2 chr5 127497439 SLC12A2 chr5 127497408 Exonic hg19 NA BQ440563 Out-of-frame Intra-chr q23.3 q23.3 117087 ChimerSeq ChiTaRs ChiTaRs FHIT-PRDM12 FHIT chr3 60213935 PRDM12 chr9 133551986 Exonic hg19 NA BF370943 Out-of-frame Inter-chr p14.2 Tumor suppressor gene q34.12 Transcription factor 117088 ChimerSeq ChiTaRs ChiTaRs CSPP1-CSPP1 CSPP1 chr8 68107798 CSPP1 chr8 68062148 Exonic hg19 NA AK026143 Out-of-frame Intra-chr q13.1 q13.1 117089 ChimerSeq ChiTaRs ChiTaRs SSR3-SATB1 SSR3 chr3 156272827 SATB1 chr3 18419661 Exonic hg19 NA AW994363 Out-of-frame Intra-chr q25.31 p24.3 Transcription factor 117090 ChimerSeq ChiTaRs ChiTaRs PARP8-C2orf43 PARP8 chr5 50076501 C2orf43 chr2 20884969 Exonic hg19 NA BF590183 Out-of-frame Inter-chr q11.1 117091 ChimerSeq ChiTaRs ChiTaRs TGOLN2-AZGP1 TGOLN2 chr2 85547887 AZGP1 chr7 99564364 Exonic hg19 NA BE897753 Out-of-frame Inter-chr p11.2 q22.1 Tumor suppressor gene 117092 ChimerSeq ChiTaRs ChiTaRs ZFHX4-AMBRA1 ZFHX4 chr8 77699631 AMBRA1 chr11 46496512 Exonic hg19 NA AW609203 Out-of-frame Inter-chr q21.13 Transcription factor p11.2 117093 ChimerSeq ChiTaRs ChiTaRs SAAL1-ENO1 SAAL1 chr11 18103299 ENO1 chr1 8921085 Exonic hg19 NA BI023233 Out-of-frame Inter-chr p15.1 p36.23 117094 ChimerSeq ChiTaRs ChiTaRs DOCK10-TP53BP1 DOCK10 chr2 225644037 TP53BP1 chr15 43778558 Exonic hg19 NA BE503333 Out-of-frame Inter-chr q36.2 q15.3 Tumor suppressor gene 117095 ChimerSeq ChiTaRs ChiTaRs KDM1A-KDM1A KDM1A chr1 23398678 KDM1A chr1 23398909 Exonic hg19 NA AW995373 Out-of-frame Intra-chr p36.12 p36.12 117096 ChimerSeq ChiTaRs ChiTaRs TEX261-TEX261 TEX261 chr2 71214553 TEX261 chr2 71214579 Exonic hg19 NA BE698523 Out-of-frame Intra-chr p13.3 p13.3 117097 ChimerSeq ChiTaRs ChiTaRs HINT1-HINT1 HINT1 chr5 130495263 HINT1 chr5 130498325 Exonic hg19 NA BQ775173 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene 117098 ChimerSeq ChiTaRs ChiTaRs CDK19-CDK19 CDK19 chr6 110932473 CDK19 chr6 110931928 Exonic hg19 NA CN411943 Out-of-frame Intra-chr q21 q21 117099 ChimerSeq ChiTaRs ChiTaRs MAP7D1-TXNRD1 MAP7D1 chr1 36646450 TXNRD1 chr12 104659361 Exonic hg19 NA BG231003 Out-of-frame Inter-chr p34.3 q23.3 117100 ChimerSeq ChiTaRs ChiTaRs COLGALT2-MAP1B COLGALT2 chr1 184005347 MAP1B chr5 71491931 Exonic hg19 NA AW898183 Out-of-frame Inter-chr q25.3 q13.2 117101 ChimerSeq ChiTaRs ChiTaRs DDX60L-DDX60L DDX60L chr4 169314231 DDX60L chr4 169338876 Exonic hg19 NA AI432413 Out-of-frame Intra-chr q32.3 q32.3 117102 ChimerSeq ChiTaRs ChiTaRs PAPPA-PAPPA PAPPA chr9 118966133 PAPPA chr9 118965521 Exonic hg19 NA CV404853 Out-of-frame Intra-chr q33.1 q33.1 117103 ChimerSeq ChiTaRs ChiTaRs PPIG-PPIG PPIG chr2 170493419 PPIG chr2 170465243 Exonic hg19 NA CN282143 Out-of-frame Intra-chr q31.1 q31.1 117104 ChimerSeq ChiTaRs ChiTaRs DNHD1-TCP11L1 DNHD1 chr11 6569134 TCP11L1 chr11 33083114 Exonic hg19 NA BQ330913 Out-of-frame Intra-chr p15.4 p13 117105 ChimerSeq ChiTaRs ChiTaRs TRIM63-DTWD2 TRIM63 chr1 26393985 DTWD2 chr5 118309753 Exonic hg19 NA BT007373 Out-of-frame Inter-chr p36.11 q23.1 117106 ChimerSeq ChiTaRs ChiTaRs SMAP2-STXBP1 SMAP2 chr1 40885578 STXBP1 chr9 130453063 Exonic hg19 NA BI059823 Out-of-frame Inter-chr p34.2 q34.11 117107 ChimerSeq ChiTaRs ChiTaRs MIR143HG-ITGB1BP1 MIR143HG chr5 148804403 ITGB1BP1 chr2 9562340 Exonic hg19 NA BF871513 Out-of-frame Inter-chr p25.1 117108 ChimerSeq ChiTaRs ChiTaRs C9orf3-RAB35 C9orf3 chr9 97572870 RAB35 chr12 120548891 Exonic hg19 NA BP346073 Out-of-frame Inter-chr q22.32 q24.23 117109 ChimerSeq ChiTaRs ChiTaRs SPARC-SPARC SPARC chr5 151042263 SPARC chr5 151041997 Exonic hg19 NA BG119923 Out-of-frame Intra-chr q33.1 Tumor suppressor gene q33.1 Tumor suppressor gene 117110 ChimerSeq ChiTaRs ChiTaRs CCDC22-PSPH CCDC22 chrX 49107333 PSPH chr7 56131594 Exonic hg19 NA CA442113 Out-of-frame Inter-chr p11.23 p11.2 117111 ChimerSeq ChiTaRs ChiTaRs ITPR1-SOCS7 ITPR1 chr3 4593932 SOCS7 chr17 36561025 Exonic hg19 NA BF820643 Out-of-frame Inter-chr p26.1 q12 117112 ChimerSeq ChiTaRs ChiTaRs SMC2-SMC2 SMC2 chr9 106864855 SMC2 chr9 106873895 Exonic hg19 NA AW510653 Out-of-frame Intra-chr q31.1 q31.1 117113 ChimerSeq ChiTaRs ChiTaRs PMS1-FN1 PMS1 chr2 190652767 FN1 chr2 216231166 Exonic hg19 NA H77493 Out-of-frame Intra-chr q32.2 Oncogene q35 Oncogene 117114 ChimerSeq ChiTaRs ChiTaRs ATPIF1-ATPIF1 ATPIF1 chr1 28564390 ATPIF1 chr1 28563511 Exonic hg19 NA D45323 Out-of-frame Intra-chr p35.3 p35.3 117115 ChimerSeq ChiTaRs ChiTaRs PEG10-PEG10 PEG10 chr7 94297988 PEG10 chr7 94297962 Exonic hg19 NA BG819303 Out-of-frame Intra-chr q21.3 q21.3 117116 ChimerSeq ChiTaRs ChiTaRs REG1A-REG1A REG1A chr2 79350529 REG1A chr2 79350465 Exonic hg19 NA CA842583 Out-of-frame Intra-chr p12 p12 117117 ChimerSeq ChiTaRs ChiTaRs BMPR2-TTC17 BMPR2 chr2 203258161 TTC17 chr11 43425252 Exonic hg19 NA BF360283 Out-of-frame Inter-chr q33.1 TKL:STKR Tumor suppressor gene p12 117118 ChimerSeq ChiTaRs ChiTaRs INO80B-MOGS INO80B chr2 74687172 MOGS chr2 74691438 Exonic hg19 NA DA571383 Out-of-frame Intra-chr p13.1 p13.1 117119 ChimerSeq ChiTaRs ChiTaRs KDM5C-GLT25D1 KDM5C chrX 53221507 GLT25D1 chr19 17690558 Exonic hg19 NA AI394653 Out-of-frame Inter-chr p11.22 Oncogene 117120 ChimerSeq ChiTaRs ChiTaRs EBNA1BP2-EBNA1BP2 EBNA1BP2 chr1 43630060 EBNA1BP2 chr1 43629981 Exonic hg19 NA BE895983 Out-of-frame Intra-chr p34.2 p34.2 117121 ChimerSeq ChiTaRs ChiTaRs SQSTM1-PPM1K SQSTM1 chr5 179258273 PPM1K chr4 89194051 Exonic hg19 NA BF376523 Out-of-frame Inter-chr q35.3 q22.1 117122 ChimerSeq ChiTaRs ChiTaRs FGF13-CDK14 FGF13 chrX 137826931 CDK14 chr7 90681025 Exonic hg19 NA D16473 Out-of-frame Inter-chr q27.1 q21.13 117123 ChimerSeq ChiTaRs ChiTaRs RAP1GDS1-RAP1GDS1 RAP1GDS1 chr4 99364242 RAP1GDS1 chr4 99363300 Exonic hg19 NA CB857283 Out-of-frame Intra-chr q23 q23 117124 ChimerSeq ChiTaRs ChiTaRs RND3-RND3 RND3 chr2 151324832 RND3 chr2 151324997 Exonic hg19 NA BE695893 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene 117125 ChimerSeq ChiTaRs ChiTaRs USF1-USF1 USF1 chr1 161009359 USF1 chr1 161009063 Exonic hg19 NA BQ359663 Out-of-frame Intra-chr q23.3 Transcription factor q23.3 Transcription factor 117126 ChimerSeq ChiTaRs ChiTaRs PFKFB3-PFKFB3 PFKFB3 chr10 6251521 PFKFB3 chr10 6251101 Exonic hg19 NA AW896693 Out-of-frame Intra-chr p15.1 p15.1 117127 ChimerSeq ChiTaRs ChiTaRs ZKSCAN1-LOC100505876 ZKSCAN1 chr7 99634056 LOC100505876 chr2 37431702 Exonic hg19 NA BF691703 Out-of-frame Inter-chr q22.1 Transcription factor 117128 ChimerSeq ChiTaRs ChiTaRs S100A14-S100A14 S100A14 chr1 153587069 S100A14 chr1 153587342 Exonic hg19 NA AW385213 Out-of-frame Intra-chr q21.3 q21.3 117129 ChimerSeq ChiTaRs ChiTaRs AQP7P1-RBFOX2 AQP7P1 chr9 67281110 RBFOX2 chr22 36406017 Exonic hg19 NA BF998973 Out-of-frame Inter-chr q13 117130 ChimerSeq ChiTaRs ChiTaRs GALNT10-MYH9 GALNT10 chr5 153778307 MYH9 chr22 36707599 Exonic hg19 NA DA949043 Out-of-frame Inter-chr q33.2 q12.3 Oncogene Tumor suppressor gene 117131 ChimerSeq ChiTaRs ChiTaRs EZR-EZR EZR chr6 159239196 EZR chr6 159210318 Exonic hg19 NA BF916833 Out-of-frame Intra-chr q25.3 q25.3 117132 ChimerSeq ChiTaRs ChiTaRs ZFYVE16-ZFP90 ZFYVE16 chr5 79734523 ZFP90 chr16 68599405 Exonic hg19 NA BQ308783 Out-of-frame Inter-chr q14.1 q22.1 Transcription factor 117133 ChimerSeq ChiTaRs ChiTaRs HLA-DOB-HLA-DOB HLA-DOB chr6 4213282 HLA-DOB chr6 4211776 Exonic hg19 NA AW403603 Out-of-frame Intra-chr 117134 ChimerSeq ChiTaRs ChiTaRs HNRNPUL2-YY1AP1 HNRNPUL2 chr11 62482596 YY1AP1 chr1 155649198 Exonic hg19 NA AW247583 Out-of-frame Inter-chr q12.3 q22 117135 ChimerSeq ChiTaRs ChiTaRs QKI-QKI QKI chr6 163992118 QKI chr6 163992110 Exonic hg19 NA BF348123 Out-of-frame Intra-chr q26 q26 117136 ChimerSeq ChiTaRs ChiTaRs RRM2-NCKAP1 RRM2 chr2 10271540 NCKAP1 chr2 183866687 Exonic hg19 NA AA826373 Out-of-frame Intra-chr p25.1 q32.1 117137 ChimerSeq ChiTaRs ChiTaRs SHB-KIAA1522 SHB chr9 37919603 KIAA1522 chr1 33236737 Exonic hg19 NA AA587333 Out-of-frame Inter-chr p13.1 p35.1 117138 ChimerSeq ChiTaRs ChiTaRs ATP6V0E1-PAFAH1B1 ATP6V0E1 chr5 172461800 PAFAH1B1 chr17 2585022 Exonic hg19 NA BF750913 3'UTR-CDS Inter-chr q35.1 p13.3 Tumor suppressor gene 117139 ChimerSeq ChiTaRs ChiTaRs ARL8B-ITGA2B ARL8B chr3 5171862 ITGA2B chr17 42452079 Exonic hg19 NA J02963 Out-of-frame Inter-chr p26.1 q21.31 117140 ChimerSeq ChiTaRs ChiTaRs RPL8-AZI1 RPL8 chr8 146016710 AZI1 chr17 79163446 Exonic hg19 NA CV356443 Out-of-frame Inter-chr q24.3 117141 ChimerSeq ChiTaRs ChiTaRs MYNN-SMAP1 MYNN chr3 169495312 SMAP1 chr6 71445757 Exonic hg19 NA CK431053 Out-of-frame Inter-chr q26.2 Transcription factor q13 117142 ChimerSeq ChiTaRs ChiTaRs BSCL2-BSCL2 BSCL2 chr11 62475868 BSCL2 chr11 62476426 Exonic hg19 NA BF948113 Out-of-frame Intra-chr q12.3 q12.3 117143 ChimerSeq ChiTaRs ChiTaRs GIGYF2-BMPER GIGYF2 chr2 233647671 BMPER chr7 34076890 Exonic hg19 NA AL121233 Out-of-frame Inter-chr q37.1 p14.3 117144 ChimerSeq ChiTaRs ChiTaRs AHNAK-GRIA3 AHNAK chr11 62283691 GRIA3 chrX 122561560 Exonic hg19 NA DB304653 Out-of-frame Inter-chr q12.3 Tumor suppressor gene q25 117145 ChimerSeq ChiTaRs ChiTaRs TSPAN14-GNB2 TSPAN14 chr10 82278751 GNB2 chr7 100275753 Exonic hg19 NA AW904903 Out-of-frame Inter-chr q23.1 q22.1 117146 ChimerSeq ChiTaRs ChiTaRs GMDS-ZNF843 GMDS chr6 1792767 ZNF843 chr16 31449918 Exonic hg19 NA BE830483 Out-of-frame Inter-chr p25.3 p11.2 Transcription factor 117147 ChimerSeq ChiTaRs ChiTaRs MIR548H3-TCF12 MIR548H3 chr9 78291529 TCF12 chr15 57240360 Exonic hg19 NA JF938534 Out-of-frame Inter-chr p12 q21.3 Oncogene Transcription factor 117148 ChimerSeq ChiTaRs ChiTaRs SMR3B-MYH9 SMR3B chr4 71255517 MYH9 chr22 36768093 Exonic hg19 NA BX486673 Out-of-frame Inter-chr q13.3 q12.3 Oncogene Tumor suppressor gene 117149 ChimerSeq ChiTaRs ChiTaRs LAMP2-LAMP2 LAMP2 chrX 119564969 LAMP2 chrX 119564943 Exonic hg19 NA CB241163 Out-of-frame Intra-chr q24 q24 117150 ChimerSeq ChiTaRs ChiTaRs CDK16-USP9X CDK16 chrX 47080519 USP9X chrX 40977867 Exonic hg19 NA BI019783 Out-of-frame Intra-chr p11.3 p11.4 Oncogene 117151 ChimerSeq ChiTaRs ChiTaRs ATP1A1-UBE3C ATP1A1 chr1 116937900 UBE3C chr7 156985436 Exonic hg19 NA BG108633 Out-of-frame Inter-chr p13.1 q36.3 117152 ChimerSeq ChiTaRs ChiTaRs NEGR1-ASXL2 NEGR1 chr1 72169088 ASXL2 chr2 26015781 Exonic hg19 NA BG197293 Out-of-frame Inter-chr p31.1 p23.3 117153 ChimerSeq ChiTaRs ChiTaRs EVI5-PEAK1 EVI5 chr1 92984775 PEAK1 chr15 77521629 Exonic hg19 NA BE143703 Out-of-frame Inter-chr p22.1 q24.3 117154 ChimerSeq ChiTaRs ChiTaRs GPSM1-KIAA0195 GPSM1 chr9 139249190 KIAA0195 chr17 73495608 Exonic hg19 NA AK057893 Out-of-frame Inter-chr q34.3 117155 ChimerSeq ChiTaRs ChiTaRs GFM1-GFM1 GFM1 chr3 158409902 GFM1 chr3 158409879 Exonic hg19 NA BE869773 Out-of-frame Intra-chr q25.32 q25.32 117156 ChimerSeq ChiTaRs ChiTaRs AKR1A1-CBY1 AKR1A1 chr1 46035719 CBY1 chr22 39067484 Exonic hg19 NA AW613413 Out-of-frame Inter-chr p34.1 q13.1 117157 ChimerSeq ChiTaRs ChiTaRs RNF149-PARP6 RNF149 chr2 101893937 PARP6 chr15 72552614 Exonic hg19 NA AW391383 Out-of-frame Inter-chr q11.2 q23 117158 ChimerSeq ChiTaRs ChiTaRs ATG13-FMNL2 ATG13 chr11 46665850 FMNL2 chr2 153484927 Exonic hg19 NA BP218693 Out-of-frame Inter-chr p11.2 q23.3 117159 ChimerSeq ChiTaRs ChiTaRs DEK-DEK DEK chr6 18225236 DEK chr6 18225235 Exonic hg19 NA BM466063 Out-of-frame Intra-chr p22.3 Oncogene p22.3 Oncogene 117160 ChimerSeq ChiTaRs ChiTaRs CDC20-PIP4K2B CDC20 chr1 43828782 PIP4K2B chr17 36922424 Exonic hg19 NA BP428483 Out-of-frame Inter-chr p34.2 q12 117161 ChimerSeq ChiTaRs ChiTaRs SAMD9-GCLM SAMD9 chr7 92730629 GCLM chr1 94354014 Exonic hg19 NA AI133413 Out-of-frame Inter-chr q21.2 Oncogene p22.1 117162 ChimerSeq ChiTaRs ChiTaRs FAM84A-FAM84A FAM84A chr2 14778354 FAM84A chr2 14778087 Exonic hg19 NA AK025063 Out-of-frame Intra-chr p24.3 p24.3 117163 ChimerSeq ChiTaRs ChiTaRs HEATR5B-KIF13A HEATR5B chr2 37244584 KIF13A chr6 17888794 Exonic hg19 NA AW993933 Out-of-frame Inter-chr p22.2 p22.3 117164 ChimerSeq ChiTaRs ChiTaRs PIGR-FAM3D PIGR chr1 207101910 FAM3D chr3 58629396 Exonic hg19 NA CD723373 Out-of-frame Inter-chr q32.1 p14.2 117165 ChimerSeq ChiTaRs ChiTaRs LAMA4-ILK LAMA4 chr6 112509495 ILK chr11 6629955 Exonic hg19 NA BG985223 Out-of-frame Inter-chr q21 p15.4 TKL:MLK Tumor suppressor gene 117166 ChimerSeq ChiTaRs ChiTaRs ATP5C1-ATP5C1 ATP5C1 chr10 7839090 ATP5C1 chr10 7839096 Exonic hg19 NA AI750543 Out-of-frame Intra-chr p14 p14 117167 ChimerSeq ChiTaRs ChiTaRs MOB2-RPS3 MOB2 chr11 1577324 RPS3 chr11 75110600 Exonic hg19 NA BC017103 Out-of-frame Intra-chr p15.5 q13.4 117168 ChimerSeq ChiTaRs ChiTaRs NBPF9-INTS3 NBPF9 chr1 144591787 INTS3 chr1 153736349 Exonic hg19 NA BQ353113 Out-of-frame Intra-chr q21.2 q21.3 117169 ChimerSeq ChiTaRs ChiTaRs PSMG3-TRIM55 PSMG3 chr7 1607218 TRIM55 chr8 67084380 Exonic hg19 NA DB325313 Out-of-frame Inter-chr p22.3 q13.1 117170 ChimerSeq ChiTaRs ChiTaRs SIX2-EPB41 SIX2 chr2 45233359 EPB41 chr1 29438878 Exonic hg19 NA BE764633 Out-of-frame Inter-chr p21 Transcription factor p35.3 Tumor suppressor gene 117171 ChimerSeq ChiTaRs ChiTaRs SRRT-GAPDH SRRT chr7 100484540 GAPDH chr12 6647322 Exonic hg19 NA BF820683 Out-of-frame Inter-chr q22.1 p13.31 117172 ChimerSeq ChiTaRs ChiTaRs CASP10-NUP210 CASP10 chr2 202083038 NUP210 chr3 13372002 Exonic hg19 NA BI047863 Out-of-frame Inter-chr q33.1 p25.1 117173 ChimerSeq ChiTaRs ChiTaRs ATXN1-NFE2L1 ATXN1 chr6 16733567 NFE2L1 chr17 46137644 Exonic hg19 NA BE708163 Out-of-frame Inter-chr p22.3 q21.32 Transcription factor 117174 ChimerSeq ChiTaRs ChiTaRs CANX-CANX CANX chr5 179157572 CANX chr5 179157020 Exonic hg19 NA AW469973 Out-of-frame Intra-chr 117175 ChimerSeq ChiTaRs ChiTaRs NT5C2-NT5C2 NT5C2 chr10 104878557 NT5C2 chr10 104879448 Exonic hg19 NA BE178183 Out-of-frame Intra-chr q24.33 q24.33 117176 ChimerSeq ChiTaRs ChiTaRs AKNAD1-SAMD4A AKNAD1 chr1 109503824 SAMD4A chr14 55257212 Exonic hg19 NA BE766583 Out-of-frame Inter-chr p13.3 q22.2 117177 ChimerSeq ChiTaRs ChiTaRs PGBD2-BCL7A PGBD2 chr1 249207777 BCL7A chr12 122481917 Exonic hg19 NA AA897523 Out-of-frame Inter-chr q44 117178 ChimerSeq ChiTaRs ChiTaRs IGFBP5-DDT IGFBP5 chr2 217560272 DDT chr22 24313565 Exonic hg19 NA CB856413 5'UTR-3'UTR Inter-chr q35 Tumor suppressor gene 117179 ChimerSeq ChiTaRs ChiTaRs FARS2-LOC402160 FARS2 chr6 5513920 LOC402160 chr4 2454255 Exonic hg19 NA BM721393 Out-of-frame Inter-chr p25.1 117180 ChimerSeq ChiTaRs ChiTaRs MIR548N-MSI2 MIR548N chr2 179472747 MSI2 chr17 55738816 Exonic hg19 NA BG980033 Out-of-frame Inter-chr p14.2 q22 117181 ChimerSeq ChiTaRs ChiTaRs ANXA2P3-DZIP1L ANXA2P3 chr10 66586647 DZIP1L chr3 137822979 Exonic hg19 NA AW009363 Out-of-frame Inter-chr q21.3 q22.3 117182 ChimerSeq ChiTaRs ChiTaRs NPNT-NPNT NPNT chr4 106892607 NPNT chr4 106892564 Exonic hg19 NA N71523 Out-of-frame Intra-chr q24 q24 117183 ChimerSeq ChiTaRs ChiTaRs C1orf116-C1orf116 C1orf116 chr1 207196096 C1orf116 chr1 207196126 Exonic hg19 NA BF846533 Out-of-frame Intra-chr q32.1 q32.1 117184 ChimerSeq ChiTaRs ChiTaRs PAPPA-RPS24 PAPPA chr9 119140236 RPS24 chr10 79797017 Exonic hg19 NA BG621223 Out-of-frame Inter-chr q33.1 q22.3 117185 ChimerSeq ChiTaRs ChiTaRs MORF4L2-FST MORF4L2 chrX 102935504 FST chr5 52781904 Exonic hg19 NA BQ356473 Out-of-frame Inter-chr q22.2 q11.2 117186 ChimerSeq ChiTaRs ChiTaRs GUSBP1-MAP4 GUSBP1 chr5 21346651 MAP4 chr3 47952724 Exonic hg19 NA BF740993 Out-of-frame Inter-chr p14.3 p21.31 117187 ChimerSeq ChiTaRs ChiTaRs FANCL-FANCL FANCL chr2 58459247 FANCL chr2 58459187 Exonic hg19 NA BE694283 Out-of-frame Intra-chr p16.1 p16.1 117188 ChimerSeq ChiTaRs ChiTaRs FOXP1-GHITM FOXP1 chr3 71142311 GHITM chr10 85912085 Exonic hg19 NA BI064233 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor q23.1 117189 ChimerSeq ChiTaRs ChiTaRs HNRNPA2B1-HNRNPA2B1 HNRNPA2B1 chr7 26236988 HNRNPA2B1 chr7 26236592 Exonic hg19 NA BF334433 Out-of-frame Intra-chr p15.2 p15.2 117190 ChimerSeq ChiTaRs ChiTaRs PAPD7-SSR2 PAPD7 chr5 6753123 SSR2 chr1 155979190 Exonic hg19 NA BM811163 Out-of-frame Inter-chr p15.31 q22 117191 ChimerSeq ChiTaRs ChiTaRs FGG-TSPAN5 FGG chr4 155533776 TSPAN5 chr4 99496210 Exonic hg19 NA AI207493 Out-of-frame Intra-chr q32.1 q23 117192 ChimerSeq ChiTaRs ChiTaRs PDE8B-TERF2IP PDE8B chr5 76523439 TERF2IP chr16 75690999 Exonic hg19 NA M85313 Out-of-frame Inter-chr q13.3 q23.1 117193 ChimerSeq ChiTaRs ChiTaRs SKP1-DCAF8L2 SKP1 chr5 133512641 DCAF8L2 chrX 27765547 Exonic hg19 NA BU568503 Out-of-frame Inter-chr q31.1 p21.3 117194 ChimerSeq ChiTaRs ChiTaRs UNC5C-LIN7C UNC5C chr4 96347054 LIN7C chr11 27516440 Exonic hg19 NA CR745823 Out-of-frame Inter-chr q22.3 Tumor suppressor gene p14.1 117195 ChimerSeq ChiTaRs ChiTaRs LMNA-LMNA LMNA chr1 156099741 LMNA chr1 156099391 Exonic hg19 NA AW793883 Out-of-frame Intra-chr q22 q22 117196 ChimerSeq ChiTaRs ChiTaRs ATP1A1-ATP1A1 ATP1A1 chr1 116932940 ATP1A1 chr1 116943765 Exonic hg19 NA CV359423 Out-of-frame Intra-chr p13.1 p13.1 117197 ChimerSeq ChiTaRs ChiTaRs POLR3C-POLR3C POLR3C chr1 145601839 POLR3C chr1 145598536 Exonic hg19 NA BI027593 Out-of-frame Intra-chr q21.1 q21.1 117198 ChimerSeq ChiTaRs ChiTaRs GRID2-PRDX6 GRID2 chr4 94123026 PRDX6 chr1 173455450 Exonic hg19 NA BF972933 Out-of-frame Inter-chr q22.1 q25.1 117199 ChimerSeq ChiTaRs ChiTaRs NECAP2-NECAP2 NECAP2 chr1 16785938 NECAP2 chr1 16786314 Exonic hg19 NA BE765033 Out-of-frame Intra-chr p36.13 p36.13 117200 ChimerSeq ChiTaRs ChiTaRs SLC3A2-GSK3A SLC3A2 chr11 62648647 GSK3A chr19 42736220 Exonic hg19 NA BF766193 Out-of-frame Inter-chr q12.3 q13.2 CMGC:GSK 117201 ChimerSeq ChiTaRs ChiTaRs DCAF8-DCAF8 DCAF8 chr1 160248659 DCAF8 chr1 160248799 Exonic hg19 NA CK903773 Out-of-frame Intra-chr q23.2 q23.2 117202 ChimerSeq ChiTaRs ChiTaRs CLCNKB-ABHD2 CLCNKB chr1 16377433 ABHD2 chr15 89742663 Exonic hg19 NA BF822523 Out-of-frame Inter-chr p36.13 q26.1 117203 ChimerSeq ChiTaRs ChiTaRs YEATS2-SIN3B YEATS2 chr3 183530411 SIN3B chr19 16954465 Exonic hg19 NA BQ181363 Out-of-frame Inter-chr q27.1 p13.11 117204 ChimerSeq ChiTaRs ChiTaRs AGPAT5-HNRNPH3 AGPAT5 chr8 6616626 HNRNPH3 chr10 70102562 Exonic hg19 NA BE089963 Out-of-frame Inter-chr p23.1 q21.3 117205 ChimerSeq ChiTaRs ChiTaRs RPL5-MINK1 RPL5 chr1 93307480 MINK1 chr17 4794810 Exonic hg19 NA AI040133 3'UTR-CDS Inter-chr p22.1 Tumor suppressor gene p13.2 117206 ChimerSeq ChiTaRs ChiTaRs RNF38-FAM48A RNF38 chr9 36336938 FAM48A chr13 37598294 Exonic hg19 NA AW903133 Out-of-frame Inter-chr p13.2 117207 ChimerSeq ChiTaRs ChiTaRs RNF144A-CCNJL RNF144A chr2 7181877 CCNJL chr5 159680621 Exonic hg19 NA BE166383 Out-of-frame Inter-chr p25.1 Tumor suppressor gene q33.3 117208 ChimerSeq ChiTaRs ChiTaRs CLTB-MCMBP CLTB chr5 175819547 MCMBP chr10 121591569 Exonic hg19 NA N90043 Out-of-frame Inter-chr q35.2 q26.11 117209 ChimerSeq ChiTaRs ChiTaRs CSGALNACT1-RNF144B CSGALNACT1 chr8 19513629 RNF144B chr6 18439868 Exonic hg19 NA CV347923 Out-of-frame Inter-chr p21.3 p22.3 117210 ChimerSeq ChiTaRs ChiTaRs ANK2-ACO2 ANK2 chr4 114038344 ACO2 chr22 41911472 Exonic hg19 NA BI596363 Out-of-frame Inter-chr q25 q13.2 117211 ChimerSeq ChiTaRs ChiTaRs LRRFIP2-LRRFIP2 LRRFIP2 chr3 37144394 LRRFIP2 chr3 37147007 Exonic hg19 NA W88603 Out-of-frame Intra-chr p22.2 p22.2 117212 ChimerSeq ChiTaRs ChiTaRs SAT1-ANKH SAT1 chrX 23802281 ANKH chr5 14710193 Exonic hg19 NA AW361033 Out-of-frame Inter-chr p22.11 p15.2 117213 ChimerSeq ChiTaRs ChiTaRs AKNAD1-FEM1C AKNAD1 chr1 109426414 FEM1C chr5 114858823 Exonic hg19 NA AW389983 Out-of-frame Inter-chr p13.3 q22.3 117214 ChimerSeq ChiTaRs ChiTaRs SSR3-KIF3B SSR3 chr3 156258158 KIF3B chr20 30920976 Exonic hg19 NA AI380153 Out-of-frame Inter-chr q25.31 q11.21 117215 ChimerSeq ChiTaRs ChiTaRs TOP2B-TOP2B TOP2B chr3 25660268 TOP2B chr3 25650800 Exonic hg19 NA BQ431453 Out-of-frame Intra-chr p24.2 p24.2 117216 ChimerSeq ChiTaRs ChiTaRs PIK3R4-PIK3R4 PIK3R4 chr3 130397958 PIK3R4 chr3 130397932 Exonic hg19 NA AI475213 Out-of-frame Intra-chr q22.1 Other:VPS15 q22.1 Other:VPS15 117217 ChimerSeq ChiTaRs ChiTaRs AGPAT4-C12orf65 AGPAT4 chr6 161565134 C12orf65 chr12 123732823 Exonic hg19 NA AK126043 Out-of-frame Inter-chr q26 q24.31 117218 ChimerSeq ChiTaRs ChiTaRs ASAP1-ASAP1 ASAP1 chr8 131179077 ASAP1 chr8 131155219 Exonic hg19 NA BE148003 Out-of-frame Intra-chr q24.22 q24.22 117219 ChimerSeq ChiTaRs ChiTaRs TEAD1-TEAD1 TEAD1 chr11 12799268 TEAD1 chr11 12798919 Exonic hg19 NA BF353523 Out-of-frame Intra-chr p15.3 Transcription factor p15.3 Transcription factor 117220 ChimerSeq ChiTaRs ChiTaRs EIF4E3-EIF4E3 EIF4E3 chr3 71739186 EIF4E3 chr3 71748765 Exonic hg19 NA BF955653 Out-of-frame Intra-chr p13 p13 117221 ChimerSeq ChiTaRs ChiTaRs PERP-SSBP1 PERP chr6 138412846 SSBP1 chr7 141441388 Exonic hg19 NA BE710423 Out-of-frame Inter-chr q23.3 117222 ChimerSeq ChiTaRs ChiTaRs HOXD1-SENP6 HOXD1 chr2 177055635 SENP6 chr6 76425286 Exonic hg19 NA AW089983 3'UTR-CDS Inter-chr q31.1 Transcription factor q14.1 117223 ChimerSeq ChiTaRs ChiTaRs AMOTL2-CAMSAP2 AMOTL2 chr3 134091412 CAMSAP2 chr1 200785814 Exonic hg19 NA BI011743 Out-of-frame Inter-chr q22.2 q32.1 117224 ChimerSeq ChiTaRs ChiTaRs RGS21-WDR60 RGS21 chr1 192329432 WDR60 chr7 158662544 Exonic hg19 NA BG942983 Out-of-frame Inter-chr q31.2 q36.3 117225 ChimerSeq ChiTaRs ChiTaRs ZXDC-ZXDC ZXDC chr3 126178371 ZXDC chr3 126177864 Exonic hg19 NA BM723873 Out-of-frame Intra-chr q21.3 Transcription factor q21.3 Transcription factor 117226 ChimerSeq ChiTaRs ChiTaRs LRBA-KTN1 LRBA chr4 151531135 KTN1 chr14 56096715 Exonic hg19 NA BF815703 Out-of-frame Inter-chr q31.3 q22.3 117227 ChimerSeq ChiTaRs ChiTaRs SPINK1-NCOA3 SPINK1 chr5 147207693 NCOA3 chr20 46232662 Exonic hg19 NA AI571643 Out-of-frame Inter-chr q32 q13.12 Transcription factor 117228 ChimerSeq ChiTaRs ChiTaRs FBXW2-FBXW2 FBXW2 chr9 123522501 FBXW2 chr9 123522106 Exonic hg19 NA BG956103 Out-of-frame Intra-chr q33.2 q33.2 117229 ChimerSeq ChiTaRs ChiTaRs CNST-CNST CNST chr1 246830428 CNST chr1 246830911 Exonic hg19 NA AA972163 Out-of-frame Intra-chr q44 q44 117230 ChimerSeq ChiTaRs ChiTaRs FAT1-FAT1 FAT1 chr4 187539266 FAT1 chr4 187535436 Exonic hg19 NA BE815083 Out-of-frame Intra-chr q35.2 Tumor suppressor gene q35.2 Tumor suppressor gene 117231 ChimerSeq ChiTaRs ChiTaRs PFDN2-RAB7A PFDN2 chr1 161070588 RAB7A chr3 128444992 Exonic hg19 NA DA679943 Out-of-frame Inter-chr q23.3 q21.3 Tumor suppressor gene 117232 ChimerSeq ChiTaRs ChiTaRs FGFR4-ABL1 FGFR4 chr5 176520767 ABL1 chr9 133760182 Exonic hg19 NA BF760653 Out-of-frame Inter-chr q35.2 TK:FGFR Oncogene q34.12 TK:Abl Oncogene 117233 ChimerSeq ChiTaRs ChiTaRs ITPR1-DOCK5 ITPR1 chr3 4832171 DOCK5 chr8 25232318 Exonic hg19 NA AW904353 Out-of-frame Inter-chr p26.1 p21.2 117234 ChimerSeq ChiTaRs ChiTaRs ACBD6-WDR91 ACBD6 chr1 180461501 WDR91 chr7 134871767 Exonic hg19 NA BG765283 Out-of-frame Inter-chr q25.3 q33 117235 ChimerSeq ChiTaRs ChiTaRs SSBP3-SLC27A4 SSBP3 chr1 54692389 SLC27A4 chr9 131122886 Exonic hg19 NA BU623643 Out-of-frame Inter-chr p32.3 q34.11 117236 ChimerSeq ChiTaRs ChiTaRs PMPCB-MAP4 PMPCB chr7 102960127 MAP4 chr3 47912572 Exonic hg19 NA AW993843 Out-of-frame Inter-chr q22.1 p21.31 117237 ChimerSeq ChiTaRs ChiTaRs PLXNA2-PLXNA2 PLXNA2 chr1 208202336 PLXNA2 chr1 208206695 Exonic hg19 NA DA812593 Out-of-frame Intra-chr q32.2 q32.2 117238 ChimerSeq ChiTaRs ChiTaRs KLHDC3-KLHDC3 KLHDC3 chr6 42985614 KLHDC3 chr6 42986098 Exonic hg19 NA BF878063 Out-of-frame Intra-chr p21.1 p21.1 117239 ChimerSeq ChiTaRs ChiTaRs FBXO9-FBXO9 FBXO9 chr6 52957765 FBXO9 chr6 52938375 Exonic hg19 NA AW418543 Out-of-frame Intra-chr p12.1 p12.1 117240 ChimerSeq ChiTaRs ChiTaRs PDIA4-UBR4 PDIA4 chr7 148709279 UBR4 chr1 19419932 Exonic hg19 NA BG015693 Out-of-frame Inter-chr q36.1 p36.13 117241 ChimerSeq ChiTaRs ChiTaRs LARS-WAPAL LARS chr5 145533376 WAPAL chr10 88206127 Exonic hg19 NA BF752473 Out-of-frame Inter-chr q32 117242 ChimerSeq ChiTaRs ChiTaRs IFITM1-CRIM1 IFITM1 chr11 315272 CRIM1 chr2 36686596 Exonic hg19 NA AI656093 3'UTR-CDS Inter-chr p15.5 Oncogene p22.2 117243 ChimerSeq ChiTaRs ChiTaRs RAP1A-EIF4G1 RAP1A chr1 112193650 EIF4G1 chr3 184045905 Exonic hg19 NA AK098133 Out-of-frame Inter-chr p13.2 Tumor suppressor gene q27.1 117244 ChimerSeq ChiTaRs ChiTaRs WWC3-CLEC18A WWC3 chrX 10073274 CLEC18A chr16 70152794 Exonic hg19 NA BI061823 Out-of-frame Inter-chr p22.2 q22.1 117245 ChimerSeq ChiTaRs ChiTaRs MIR31HG-MIR31HG MIR31HG chr9 21550775 MIR31HG chr9 21550780 Exonic hg19 NA BI006543 Out-of-frame Intra-chr p21.3 p21.3 117246 ChimerSeq ChiTaRs ChiTaRs HLA-B-SBK1 HLA-B chr6 31322917 SBK1 chr16 28334121 Exonic hg19 NA BI041983 Out-of-frame Inter-chr p12.1 117247 ChimerSeq ChiTaRs ChiTaRs ZCCHC7-NR2C2 ZCCHC7 chr9 37220137 NR2C2 chr3 15090171 Exonic hg19 NA M86103 Out-of-frame Inter-chr p13.2 p25.1 Tumor suppressor gene Transcription factor 117248 ChimerSeq ChiTaRs ChiTaRs CRAT-DOLPP1 CRAT chr9 131862545 DOLPP1 chr9 131847201 Exonic hg19 NA T12603 Out-of-frame Intra-chr q34.11 q34.11 117249 ChimerSeq ChiTaRs ChiTaRs CDK5RAP2-NCAM1 CDK5RAP2 chr9 123225313 NCAM1 chr11 112947543 Exonic hg19 NA AW889793 Out-of-frame Inter-chr q33.2 q23.2 117250 ChimerSeq ChiTaRs ChiTaRs COPB1-COPB1 COPB1 chr11 14479328 COPB1 chr11 14479058 Exonic hg19 NA BG393843 Out-of-frame Intra-chr p15.2 p15.2 117251 ChimerSeq ChiTaRs ChiTaRs MAOA-ACTB MAOA chrX 43603397 ACTB chr7 5567911 Exonic hg19 NA BF803193 CDS-3'UTR Inter-chr p11.3 p22.1 117252 ChimerSeq ChiTaRs ChiTaRs LIPA-LIPA LIPA chr10 90974701 LIPA chr10 91011494 Exonic hg19 NA BP306273 Out-of-frame Intra-chr q23.31 q23.31 117253 ChimerSeq ChiTaRs ChiTaRs BMP8A-PPIEL BMP8A chr1 39992707 PPIEL chr1 40007763 Exonic hg19 NA AW836213 Out-of-frame Intra-chr p34.3 p34.3 117254 ChimerSeq ChiTaRs ChiTaRs CANX-PPAP2B CANX chr5 179153735 PPAP2B chr1 57045203 Exonic hg19 NA BP240903 Out-of-frame Inter-chr 117255 ChimerSeq ChiTaRs ChiTaRs AIFM2-AIFM2 AIFM2 chr10 71892565 AIFM2 chr10 71873742 Exonic hg19 NA CB164713 Out-of-frame Intra-chr q22.1 q22.1 117256 ChimerSeq ChiTaRs ChiTaRs SOX6-HTRA1 SOX6 chr11 16002538 HTRA1 chr10 124249313 Exonic hg19 NA BF380013 Out-of-frame Inter-chr p15.2 Transcription factor q26.13 Tumor suppressor gene 117257 ChimerSeq ChiTaRs ChiTaRs SGCD-SGCD SGCD chr5 155322133 SGCD chr5 155322138 Exonic hg19 NA BF813573 Out-of-frame Intra-chr q33.2 q33.2 117258 ChimerSeq ChiTaRs ChiTaRs TET3-TET3 TET3 chr2 74330045 TET3 chr2 74330046 Exonic hg19 NA BF089803 Out-of-frame Intra-chr p13.1 Transcription factor p13.1 Transcription factor 117259 ChimerSeq ChiTaRs ChiTaRs KCNMA1-LHFPL2 KCNMA1 chr10 79123070 LHFPL2 chr5 77811774 Exonic hg19 NA AI076783 Out-of-frame Inter-chr q22.3 q14.1 117260 ChimerSeq ChiTaRs ChiTaRs MKRN1-GDA MKRN1 chr7 140156384 GDA chr9 74863556 Exonic hg19 NA BF802793 Out-of-frame Inter-chr q34 q21.13 117261 ChimerSeq ChiTaRs ChiTaRs SSRP1-SSRP1 SSRP1 chr11 57099932 SSRP1 chr11 57099203 Exonic hg19 NA BF899073 Out-of-frame Intra-chr q12.1 q12.1 117262 ChimerSeq ChiTaRs ChiTaRs AUTS2-LHFP AUTS2 chr7 69812081 LHFP chr13 40045119 Exonic hg19 NA BF329183 Out-of-frame Inter-chr q11.22 q14.11 117263 ChimerSeq ChiTaRs ChiTaRs NDRG1-CSTF2 NDRG1 chr8 134309495 CSTF2 chrX 100079227 Exonic hg19 NA DA515233 Out-of-frame Inter-chr q24.22 Tumor suppressor gene q22.1 117264 ChimerSeq ChiTaRs ChiTaRs LMNA-LMNA LMNA chr1 156109105 LMNA chr1 156109496 Exonic hg19 NA AI184403 Out-of-frame Intra-chr q22 q22 117265 ChimerSeq ChiTaRs ChiTaRs LINC00461-LINC00461 LINC00461 chr5 87978963 LINC00461 chr5 87978874 Exonic hg19 NA CB054593 Out-of-frame Intra-chr q14.3 q14.3 117266 ChimerSeq ChiTaRs ChiTaRs ACTB-HIPK2 ACTB chr7 5567674 HIPK2 chr7 139477503 Exonic hg19 NA BE828383 Out-of-frame Intra-chr p22.1 q34 CMGC:DYRK Tumor suppressor gene 117267 ChimerSeq ChiTaRs ChiTaRs S100A16-S100A16 S100A16 chr1 153579669 S100A16 chr1 153579813 Exonic hg19 NA AA578043 Out-of-frame Intra-chr q21.3 q21.3 117268 ChimerSeq ChiTaRs ChiTaRs TMEM185B-SCRIB TMEM185B chr2 120978682 SCRIB chr8 144873184 Exonic hg19 NA AW961173 Out-of-frame Inter-chr q14.2 Tumor suppressor gene 117269 ChimerSeq ChiTaRs ChiTaRs PLD5-SPTLC1 PLD5 chr1 242655281 SPTLC1 chr9 94802700 Exonic hg19 NA BF832583 Out-of-frame Inter-chr q43 q22.31 117270 ChimerSeq ChiTaRs ChiTaRs ATP6V1B2-ATP6V1B2 ATP6V1B2 chr8 20079207 ATP6V1B2 chr8 20078064 Exonic hg19 NA BF591113 3'UTR-CDS Intra-chr p21.3 p21.3 117271 ChimerSeq ChiTaRs ChiTaRs EIF5B-EIF5B EIF5B chr2 99980770 EIF5B chr2 99980202 Exonic hg19 NA AW081923 Out-of-frame Intra-chr q11.2 q11.2 117272 ChimerSeq ChiTaRs ChiTaRs NOS1AP-HNRNPA2B1 NOS1AP chr1 162098554 HNRNPA2B1 chr7 26230761 Exonic hg19 NA BI035463 Out-of-frame Inter-chr q23.3 p15.2 117273 ChimerSeq ChiTaRs ChiTaRs CNKSR2-PIP5K1B CNKSR2 chrX 21672665 PIP5K1B chr9 71320616 Exonic hg19 NA X92493 Out-of-frame Inter-chr p22.12 q21.11 117274 ChimerSeq ChiTaRs ChiTaRs MPP1-MPP1 MPP1 chrX 154007316 MPP1 chrX 154007044 Exonic hg19 NA BF086593 Out-of-frame Intra-chr q28 q28 117275 ChimerSeq ChiTaRs ChiTaRs AKR1B1-ITK AKR1B1 chr7 134135656 ITK chr5 156679776 Exonic hg19 NA AV705293 Out-of-frame Inter-chr q33 Tumor suppressor gene q33.3 TK:Tec 117276 ChimerSeq ChiTaRs ChiTaRs SV2A-SCLY SV2A chr1 149878321 SCLY chr2 238991969 Exonic hg19 NA BQ339693 Out-of-frame Inter-chr q21.2 q37.3 117277 ChimerSeq ChiTaRs ChiTaRs PDLIM1-PPP1CB PDLIM1 chr10 97007471 PPP1CB chr2 29023654 Exonic hg19 NA BP386903 Out-of-frame Inter-chr q23.33 p23.2 117278 ChimerSeq ChiTaRs ChiTaRs ODF2-PLAT ODF2 chr9 131262529 PLAT chr8 42033398 Exonic hg19 NA BG990023 Out-of-frame Inter-chr q34.11 p11.21 117279 ChimerSeq ChiTaRs ChiTaRs PHIP-PHIP PHIP chr6 79699862 PHIP chr6 79699421 Exonic hg19 NA AV730623 Out-of-frame Intra-chr q14.1 q14.1 117280 ChimerSeq ChiTaRs ChiTaRs FBXO10-NF2 FBXO10 chr9 37536175 NF2 chr22 30093811 Exonic hg19 NA BC071653 Out-of-frame Inter-chr p13.2 q12.2 Oncogene Tumor suppressor gene 117281 ChimerSeq ChiTaRs ChiTaRs FAM13B-FNIP2 FAM13B chr5 137317967 FNIP2 chr4 159811962 Exonic hg19 NA BI056653 Out-of-frame Inter-chr q31.2 q32.1 117282 ChimerSeq ChiTaRs ChiTaRs RPL14-S100A16 RPL14 chr3 40503771 S100A16 chr1 153579639 Exonic hg19 NA BU630143 Out-of-frame Inter-chr p22.1 q21.3 117283 ChimerSeq ChiTaRs ChiTaRs ADAM12-PPP2R1A ADAM12 chr10 127829315 PPP2R1A chr19 52729560 Exonic hg19 NA AL709013 Out-of-frame Inter-chr q26.2 q13.41 Oncogene 117284 ChimerSeq ChiTaRs ChiTaRs HLA-DPB1-HLA-DPB1 HLA-DPB1 chr6 4497732 HLA-DPB1 chr6 4492817 Exonic hg19 NA BF927723 Out-of-frame Intra-chr 117285 ChimerSeq ChiTaRs ChiTaRs PIK3R1-PIK3R1 PIK3R1 chr5 67594570 PIK3R1 chr5 67595900 Exonic hg19 NA BU742563 Out-of-frame Intra-chr q13.1 Oncogene q13.1 Oncogene 117286 ChimerSeq ChiTaRs ChiTaRs PLEKHG1-BMPR2 PLEKHG1 chr6 151070456 BMPR2 chr2 203267207 Exonic hg19 NA BG005633 Out-of-frame Inter-chr q25.1 q33.1 TKL:STKR Tumor suppressor gene 117287 ChimerSeq ChiTaRs ChiTaRs ATXN1-ATXN1 ATXN1 chr6 16671148 ATXN1 chr6 16689767 Exonic hg19 NA AK021743 Out-of-frame Intra-chr p22.3 p22.3 117288 ChimerSeq ChiTaRs ChiTaRs LRRFIP1-NR3C1 LRRFIP1 chr2 238592138 NR3C1 chr5 142780201 Exonic hg19 NA DW412083 Out-of-frame Inter-chr q37.3 q31.3 Transcription factor 117289 ChimerSeq ChiTaRs ChiTaRs TCTEX1D2-PRMT7 TCTEX1D2 chr3 196044151 PRMT7 chr16 68353614 Exonic hg19 NA BE159383 Out-of-frame Inter-chr q29 q22.1 117290 ChimerSeq ChiTaRs ChiTaRs MAN1A2-MAN1A2 MAN1A2 chr1 117944987 MAN1A2 chr1 117957353 Exonic hg19 NA AW894933 Out-of-frame Intra-chr p12 p12 117291 ChimerSeq ChiTaRs ChiTaRs SLIT1-RAB10 SLIT1 chr10 98850810 RAB10 chr2 26357905 Exonic hg19 NA BF934573 Out-of-frame Inter-chr q24.1 p23.3 117292 ChimerSeq ChiTaRs ChiTaRs FBXW7-PRR4 FBXW7 chr4 153244258 PRR4 chr12 10998476 Exonic hg19 NA BF089643 Out-of-frame Inter-chr q31.3 Oncogene Tumor suppressor gene 117293 ChimerSeq ChiTaRs ChiTaRs SAG-SAG SAG chr2 234243699 SAG chr2 234243043 Exonic hg19 NA W27203 Out-of-frame Intra-chr 117294 ChimerSeq ChiTaRs ChiTaRs NFIA-GNPAT NFIA chr1 61926976 GNPAT chr1 231398550 Exonic hg19 NA AK023953 Out-of-frame Intra-chr p31.3 Transcription factor q42.2 117295 ChimerSeq ChiTaRs ChiTaRs RERE-PTGER3 RERE chr1 8456461 PTGER3 chr1 71501824 Exonic hg19 NA BF333113 Out-of-frame Intra-chr p36.23 p31.1 117296 ChimerSeq ChiTaRs ChiTaRs RARRES1-RARRES1 RARRES1 chr3 158424701 RARRES1 chr3 158423383 Exonic hg19 NA AW993923 Out-of-frame Intra-chr q25.32 q25.32 117297 ChimerSeq ChiTaRs ChiTaRs ALB-SETD4 ALB chr4 74270868 SETD4 chr21 37444788 Exonic hg19 NA AI207513 Out-of-frame Inter-chr q13.3 q22.12 117298 ChimerSeq ChiTaRs ChiTaRs NBEAL2-NBEAL2 NBEAL2 chr3 47037846 NBEAL2 chr3 47033009 Exonic hg19 NA CN482413 Out-of-frame Intra-chr p21.31 p21.31 117299 ChimerSeq ChiTaRs ChiTaRs PTPN12-CKAP5 PTPN12 chr7 77200455 CKAP5 chr11 46765654 Exonic hg19 NA BF056903 Out-of-frame Inter-chr q11.23 Tumor suppressor gene p11.2 117300 ChimerSeq ChiTaRs ChiTaRs EDEM3-EDEM3 EDEM3 chr1 184661234 EDEM3 chr1 184662192 Exonic hg19 NA CV569883 Out-of-frame Intra-chr q25.3 q25.3 117301 ChimerSeq ChiTaRs ChiTaRs AGAP1-TRIOBP AGAP1 chr2 236873970 TRIOBP chr22 38158284 Exonic hg19 NA BF815813 Out-of-frame Inter-chr q37.2 q13.1 117302 ChimerSeq ChiTaRs ChiTaRs TNC-COG6 TNC chr9 117833201 COG6 chr13 40330485 Exonic hg19 NA BG459123 Out-of-frame Inter-chr q33.1 q14.11 117303 ChimerSeq ChiTaRs ChiTaRs BAZ1B-BAZ1B BAZ1B chr7 72936608 BAZ1B chr7 72855901 Exonic hg19 NA AB032253 Out-of-frame Intra-chr q11.23 q11.23 117304 ChimerSeq ChiTaRs ChiTaRs CBX3-C15orf57 CBX3 chr7 26242642 C15orf57 chr15 40854970 Exonic hg19 NA AI800263 Out-of-frame Inter-chr p15.2 q15.1 117305 ChimerSeq ChiTaRs ChiTaRs DCTD-DCTD DCTD chr4 183811676 DCTD chr4 183811364 Exonic hg19 NA AW946723 Out-of-frame Intra-chr q35.1 q35.1 117306 ChimerSeq ChiTaRs ChiTaRs CD44-SERINC5 CD44 chr11 35251011 SERINC5 chr5 79453346 Exonic hg19 NA EY123442 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene q14.1 117307 ChimerSeq ChiTaRs ChiTaRs MSH6-FBXO11 MSH6 chr2 48031347 FBXO11 chr2 48034327 Exonic hg19 NA BG779363 Out-of-frame Intra-chr p16.3 Oncogene p16.3 117308 ChimerSeq ChiTaRs ChiTaRs PCDH7-SNORD113-5 PCDH7 chr4 30726218 SNORD113-5 chr14 101403738 Exonic hg19 NA BG707213 Out-of-frame Inter-chr p15.1 q32.31 117309 ChimerSeq ChiTaRs ChiTaRs RAP2C-RAP2C RAP2C chrX 131342605 RAP2C chrX 131344197 Exonic hg19 NA DA833583 Out-of-frame Intra-chr q26.2 q26.2 117310 ChimerSeq ChiTaRs ChiTaRs ANK2-ANK2 ANK2 chr4 114274914 ANK2 chr4 114275069 Exonic hg19 NA AI470543 Out-of-frame Intra-chr q25 q25 117311 ChimerSeq ChiTaRs ChiTaRs HNRNPU-HNRNPU HNRNPU chr1 245016762 HNRNPU chr1 245016757 Exonic hg19 NA AW419283 Out-of-frame Intra-chr q44 q44 117312 ChimerSeq ChiTaRs ChiTaRs UNC5B-UNC5B UNC5B chr10 73059716 UNC5B chr10 73060741 Exonic hg19 NA CA411593 Out-of-frame Intra-chr q22.1 Tumor suppressor gene q22.1 Tumor suppressor gene 117313 ChimerSeq ChiTaRs ChiTaRs MTDH-MTDH MTDH chr8 98738125 MTDH chr8 98738111 Exonic hg19 NA BG166673 Out-of-frame Intra-chr q22.1 q22.1 117314 ChimerSeq ChiTaRs ChiTaRs MGAT5-KIF1B MGAT5 chr2 135208519 KIF1B chr1 10436676 Exonic hg19 NA BF802193 Out-of-frame Inter-chr q21.2 p36.22 Tumor suppressor gene 117315 ChimerSeq ChiTaRs ChiTaRs TMEM125-TMEM125 TMEM125 chr1 43739673 TMEM125 chr1 43739426 Exonic hg19 NA CA944643 3'UTR-CDS Intra-chr p34.2 p34.2 117316 ChimerSeq ChiTaRs ChiTaRs DUSP5-PPP1R16A DUSP5 chr10 112262036 PPP1R16A chr8 145722140 Exonic hg19 NA AI612853 Out-of-frame Inter-chr q25.2 Tumor suppressor gene q24.3 117317 ChimerSeq ChiTaRs ChiTaRs FIP1L1-FIP1L1 FIP1L1 chr4 54319300 FIP1L1 chr4 54280779 Exonic hg19 NA BF801893 Out-of-frame Intra-chr q12 q12 117318 ChimerSeq ChiTaRs ChiTaRs UPF2-MTAP UPF2 chr10 12011521 MTAP chr9 21861026 Exonic hg19 NA CR738223 Out-of-frame Inter-chr p14 p21.3 Tumor suppressor gene 117319 ChimerSeq ChiTaRs ChiTaRs EXOC4-NDUFS5 EXOC4 chr7 133041181 NDUFS5 chr1 39494411 Exonic hg19 NA BF817133 Out-of-frame Inter-chr q33 p34.3 117320 ChimerSeq ChiTaRs ChiTaRs SFRP2-SFRP2 SFRP2 chr4 154701977 SFRP2 chr4 154702483 Exonic hg19 NA CN431023 Out-of-frame Intra-chr q31.3 Tumor suppressor gene q31.3 Tumor suppressor gene 117321 ChimerSeq ChiTaRs ChiTaRs PAK2-PAK2 PAK2 chr3 196558978 PAK2 chr3 196558003 Exonic hg19 NA BQ421883 Out-of-frame Intra-chr q29 STE:STE20 q29 STE:STE20 117322 ChimerSeq ChiTaRs ChiTaRs ZNF438-ZNF438 ZNF438 chr10 31199371 ZNF438 chr10 31199326 Exonic hg19 NA AW893493 Out-of-frame Intra-chr p11.23 Transcription factor p11.23 Transcription factor 117323 ChimerSeq ChiTaRs ChiTaRs UNC80-ITPKB UNC80 chr2 210682626 ITPKB chr1 226820241 Exonic hg19 NA BQ338653 Out-of-frame Inter-chr q34 q42.12 117324 ChimerSeq ChiTaRs ChiTaRs BRCC3-TRA@ BRCC3 chrX 154345029 TRA@ chr14 23016444 Exonic hg19 NA S68018 Out-of-frame Inter-chr q28 q11.2 117325 ChimerSeq ChiTaRs ChiTaRs PRICKLE3-CD74 PRICKLE3 chrX 49032995 CD74 chr5 149781552 Exonic hg19 NA BG984903 Out-of-frame Inter-chr p11.23 q33.1 117326 ChimerSeq ChiTaRs ChiTaRs SOX13-CACNA1C SOX13 chr1 204095679 CACNA1C chr12 2743904 Exonic hg19 NA BI058553 Out-of-frame Inter-chr q32.1 Transcription factor p13.33 117327 ChimerSeq ChiTaRs ChiTaRs EGFR-PTPRF EGFR chr7 55273215 PTPRF chr1 43996703 Exonic hg19 NA BG005213 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene p34.2 117328 ChimerSeq ChiTaRs ChiTaRs NAV2-SLC33A1 NAV2 chr11 20141258 SLC33A1 chr3 155545789 Exonic hg19 NA BE813423 Out-of-frame Inter-chr p15.1 q25.31 117329 ChimerSeq ChiTaRs ChiTaRs RRM1-RRM1 RRM1 chr11 4125639 RRM1 chr11 4125492 Exonic hg19 NA H90823 Out-of-frame Intra-chr p15.4 Oncogene p15.4 Oncogene 117330 ChimerSeq ChiTaRs ChiTaRs PDLIM2-PDLIM2 PDLIM2 chr8 22449128 PDLIM2 chr8 22449112 Exonic hg19 NA BG419413 Out-of-frame Intra-chr p21.3 p21.3 117331 ChimerSeq ChiTaRs ChiTaRs ZNF22-ZNF22 ZNF22 chr10 45500546 ZNF22 chr10 45500523 Exonic hg19 NA BM473403 Out-of-frame Intra-chr q11.21 Transcription factor q11.21 Transcription factor 117332 ChimerSeq ChiTaRs ChiTaRs MAGI1-MAGI1 MAGI1 chr3 65962489 MAGI1 chr3 65973133 Exonic hg19 NA BE160243 Out-of-frame Intra-chr Oncogene Oncogene 117333 ChimerSeq ChiTaRs ChiTaRs CDKN1A-CDKN1A CDKN1A chr6 36654824 CDKN1A chr6 36654797 Exonic hg19 NA BI870543 Out-of-frame Intra-chr p21.2 Tumor suppressor gene p21.2 Tumor suppressor gene 117334 ChimerSeq ChiTaRs ChiTaRs PLP1-PLP1 PLP1 chrX 103046888 PLP1 chrX 103046981 Exonic hg19 NA CR740283 Out-of-frame Intra-chr q22.2 q22.2 117335 ChimerSeq ChiTaRs ChiTaRs CLINT1-NEDD9 CLINT1 chr5 157263679 NEDD9 chr6 11186761 Exonic hg19 NA AW862003 Out-of-frame Inter-chr q33.3 p24.2 117336 ChimerSeq ChiTaRs ChiTaRs SREK1-SREK1 SREK1 chr5 65475165 SREK1 chr5 65454637 Exonic hg19 NA BF790813 Out-of-frame Intra-chr q12.3 q12.3 117337 ChimerSeq ChiTaRs ChiTaRs CGA-MFSD2A CGA chr6 87795514 MFSD2A chr1 40432474 Exonic hg19 NA AF370393 Out-of-frame Inter-chr q14.3 p34.2 Tumor suppressor gene 117338 ChimerSeq ChiTaRs ChiTaRs SLC4A4-PIGU SLC4A4 chr4 72437761 PIGU chr20 33185422 Exonic hg19 NA BM511213 Out-of-frame Inter-chr q13.3 q11.22 117339 ChimerSeq ChiTaRs ChiTaRs SGCD-RFK SGCD chr5 155771633 RFK chr9 79000724 Exonic hg19 NA Z25253 Out-of-frame Inter-chr q33.2 q21.13 117340 ChimerSeq ChiTaRs ChiTaRs PMVK-PMVK PMVK chr1 154909434 PMVK chr1 154909094 Exonic hg19 NA BP323853 Out-of-frame Intra-chr q21.3 q21.3 117341 ChimerSeq ChiTaRs ChiTaRs ALDH1A1-ALDH1A1 ALDH1A1 chr9 75515698 ALDH1A1 chr9 75515706 Exonic hg19 NA BU685483 Out-of-frame Intra-chr q21.13 q21.13 117342 ChimerSeq ChiTaRs ChiTaRs SAT1-SAT1 SAT1 chrX 23804327 SAT1 chrX 23803954 Exonic hg19 NA BU674743 5'UTR-CDS Intra-chr p22.11 p22.11 117343 ChimerSeq ChiTaRs ChiTaRs SECISBP2-MYH9 SECISBP2 chr9 91974557 MYH9 chr22 36678569 Exonic hg19 NA BQ182443 Out-of-frame Inter-chr q22.2 q12.3 Oncogene Tumor suppressor gene 117344 ChimerSeq ChiTaRs ChiTaRs CCRN4L-CRLF3 CCRN4L chr4 139959711 CRLF3 chr17 29110151 Exonic hg19 NA BM825523 Out-of-frame Inter-chr q11.2 117345 ChimerSeq ChiTaRs ChiTaRs ST3GAL1-ST3GAL1 ST3GAL1 chr8 134467213 ST3GAL1 chr8 134467266 Exonic hg19 NA CB250683 Out-of-frame Intra-chr q24.22 q24.22 117346 ChimerSeq ChiTaRs ChiTaRs PLXDC2-PLXDC2 PLXDC2 chr10 20108342 PLXDC2 chr10 20108181 Exonic hg19 NA BE153763 Out-of-frame Intra-chr p12.31 p12.31 117347 ChimerSeq ChiTaRs ChiTaRs KAT6A-KAT6A KAT6A chr8 41794992 KAT6A chr8 41798531 Exonic hg19 NA BP318953 Out-of-frame Intra-chr p11.21 Oncogene p11.21 Oncogene 117348 ChimerSeq ChiTaRs ChiTaRs ARHGAP6-MBD1 ARHGAP6 chrX 11681048 MBD1 chr18 47796390 Exonic hg19 NA AK027253 Out-of-frame Inter-chr p22.2 q21.1 Oncogene Transcription factor 117349 ChimerSeq ChiTaRs ChiTaRs C5orf43-C5orf43 C5orf43 chr5 60457055 C5orf43 chr5 60455951 Exonic hg19 NA BE931813 Out-of-frame Intra-chr 117350 ChimerSeq ChiTaRs ChiTaRs FAM168B-TCF7L2 FAM168B chr2 131806489 TCF7L2 chr10 114901011 Exonic hg19 NA BF923603 Out-of-frame Inter-chr q21.1 q25.2 Oncogene Tumor suppressor gene Transcription factor 117351 ChimerSeq ChiTaRs ChiTaRs TNC-TNC TNC chr9 117788848 TNC chr9 117788918 Exonic hg19 NA BF770933 Out-of-frame Intra-chr q33.1 q33.1 117352 ChimerSeq ChiTaRs ChiTaRs FBXW2-C1R FBXW2 chr9 123548617 C1R chr12 7187582 Exonic hg19 NA AW866363 Out-of-frame Inter-chr q33.2 p13.31 117353 ChimerSeq ChiTaRs ChiTaRs TAGLN3-KDM3B TAGLN3 chr3 111732730 KDM3B chr5 137726836 Exonic hg19 NA AI084093 Out-of-frame Inter-chr q13.2 q31.2 Tumor suppressor gene 117354 ChimerSeq ChiTaRs ChiTaRs LHPP-FLNA LHPP chr10 126285539 FLNA chrX 153579421 Exonic hg19 NA BE818193 Out-of-frame Inter-chr q26.13 q28 Tumor suppressor gene 117355 ChimerSeq ChiTaRs ChiTaRs CDK5R2-CRAMP1L CDK5R2 chr2 219826231 CRAMP1L chr16 1671384 Exonic hg19 NA BF957903 Out-of-frame Inter-chr q35 117356 ChimerSeq ChiTaRs ChiTaRs CRTAP-CRTAP CRTAP chr3 33187976 CRTAP chr3 33188682 Exonic hg19 NA AW838093 Out-of-frame Intra-chr p22.3 p22.3 117357 ChimerSeq ChiTaRs ChiTaRs SEPT11-SYT11 2011_ 9_ 1_ chr4 77942792 SYT11 chr1 155854024 Exonic hg19 NA AK094473 Out-of-frame Inter-chr q22 117358 ChimerSeq ChiTaRs ChiTaRs VPS26A-VPS26A VPS26A chr10 70916818 VPS26A chr10 70916800 Exonic hg19 NA BU507793 Out-of-frame Intra-chr q22.1 q22.1 117359 ChimerSeq ChiTaRs ChiTaRs RAPGEF2-IREB2 RAPGEF2 chr4 160256722 IREB2 chr15 78792464 Exonic hg19 NA AL117613 Out-of-frame Inter-chr q32.1 q25.1 117360 ChimerSeq ChiTaRs ChiTaRs ZNF362-CEP250 ZNF362 chr1 33741985 CEP250 chr20 34091817 Exonic hg19 NA BU160533 Out-of-frame Inter-chr p35.1 Transcription factor q11.22 117361 ChimerSeq ChiTaRs ChiTaRs RAB3GAP2-RAB3GAP2 RAB3GAP2 chr1 220324391 RAB3GAP2 chr1 220323645 Exonic hg19 NA BI819513 Out-of-frame Intra-chr q41 q41 117362 ChimerSeq ChiTaRs ChiTaRs DSE-CSNK1E DSE chr6 116596727 CSNK1E chr22 38689413 Exonic hg19 NA M62263 Out-of-frame Inter-chr q22.1 q13.1 117363 ChimerSeq ChiTaRs ChiTaRs BICC1-ADIPOR1 BICC1 chr10 60510174 ADIPOR1 chr1 202910113 Exonic hg19 NA BF229163 Out-of-frame Inter-chr q21.1 q32.1 117364 ChimerSeq ChiTaRs ChiTaRs SORBS2-SORBS2 SORBS2 chr4 186599976 SORBS2 chr4 186599577 Exonic hg19 NA BE086843 In-Frame Intra-chr q35.1 q35.1 117365 ChimerSeq ChiTaRs ChiTaRs ZBTB20-NAMPT ZBTB20 chr3 114424139 NAMPT chr7 105891622 Exonic hg19 NA BQ355873 Out-of-frame Inter-chr q13.31 Transcription factor q22.3 117366 ChimerSeq ChiTaRs ChiTaRs MRPS25-SEC23B MRPS25 chr3 15093835 SEC23B chr20 18496339 Exonic hg19 NA N34493 Out-of-frame Inter-chr p25.1 p11.23 117367 ChimerSeq ChiTaRs ChiTaRs ARHGEF11-DIS3L2 ARHGEF11 chr1 156984101 DIS3L2 chr2 233109525 Exonic hg19 NA R87313 Out-of-frame Inter-chr q23.1 q37.1 117368 ChimerSeq ChiTaRs ChiTaRs RBM10-PPT2 RBM10 chrX 47036209 PPT2 chr6 3484740 Exonic hg19 NA BG983393 Out-of-frame Inter-chr p11.3 117369 ChimerSeq ChiTaRs ChiTaRs RGS12-RGS12 RGS12 chr4 3389599 RGS12 chr4 3388804 Exonic hg19 NA BF908783 Out-of-frame Intra-chr p16.3 p16.3 117370 ChimerSeq ChiTaRs ChiTaRs ATP2C1-PDGFRA ATP2C1 chr3 130714956 PDGFRA chr4 55009534 Exonic hg19 NA BQ311503 Out-of-frame Inter-chr q22.1 q12 Oncogene 117371 ChimerSeq ChiTaRs ChiTaRs LOC100507463-ZCCHC2 LOC100507463 chr6 4244451 ZCCHC2 chr18 60191492 Exonic hg19 NA BQ309033 Out-of-frame Inter-chr q21.33 117372 ChimerSeq ChiTaRs ChiTaRs CHTOP-GRIK1 CHTOP chr1 153618679 GRIK1 chr21 31151791 Exonic hg19 NA BE825953 Out-of-frame Inter-chr q21.3 q21.3 117373 ChimerSeq ChiTaRs ChiTaRs C1orf21-WSCD2 C1orf21 chr1 184595207 WSCD2 chr12 108526970 Exonic hg19 NA BF841253 Out-of-frame Inter-chr q25.3 q23.3 117374 ChimerSeq ChiTaRs ChiTaRs MIR143HG-ST8SIA1 MIR143HG chr5 148810759 ST8SIA1 chr12 22420133 Exonic hg19 NA AW384933 Out-of-frame Inter-chr p12.1 117375 ChimerSeq ChiTaRs ChiTaRs MIR548H2-DPM2 MIR548H2 chr3 151398051 DPM2 chr9 130697892 Exonic hg19 NA BF088423 Out-of-frame Inter-chr p13.13 q34.11 117376 ChimerSeq ChiTaRs ChiTaRs COL1A2-COL1A2 COL1A2 chr7 94057770 COL1A2 chr7 94057758 Exonic hg19 NA AW384943 Out-of-frame Intra-chr q21.3 q21.3 117377 ChimerSeq ChiTaRs ChiTaRs FYTTD1-EIF4B FYTTD1 chr3 197481885 EIF4B chr12 53435318 Exonic hg19 NA BF882453 Out-of-frame Inter-chr q29 q13.13 117378 ChimerSeq ChiTaRs ChiTaRs PLD1-RPS19 PLD1 chr3 171510388 RPS19 chr19 42364898 Exonic hg19 NA BQ351523 Out-of-frame Inter-chr q26.31 Tumor suppressor gene q13.2 117379 ChimerSeq ChiTaRs ChiTaRs PCOLCE-ECHDC1 PCOLCE chr7 100206199 ECHDC1 chr6 127636021 Exonic hg19 NA BG413523 Out-of-frame Inter-chr q22.1 q22.33 117380 ChimerSeq ChiTaRs ChiTaRs SLC41A3-RECQL5 SLC41A3 chr3 125725814 RECQL5 chr17 73637640 Exonic hg19 NA BF932613 Out-of-frame Inter-chr q21.3 q25.1 117381 ChimerSeq ChiTaRs ChiTaRs NUCKS1-NUCKS1 NUCKS1 chr1 205689661 NUCKS1 chr1 205687509 Exonic hg19 NA AW515443 Out-of-frame Intra-chr q32.1 q32.1 117382 ChimerSeq ChiTaRs ChiTaRs UTP14A-BACE2 UTP14A chrX 129059088 BACE2 chr21 42598234 Exonic hg19 NA DA568103 Out-of-frame Inter-chr q26.1 q22.2 117383 ChimerSeq ChiTaRs ChiTaRs PPP1CB-PPP1CB PPP1CB chr2 29023909 PPP1CB chr2 29023244 Exonic hg19 NA CF139633 Out-of-frame Intra-chr p23.2 p23.2 117384 ChimerSeq ChiTaRs ChiTaRs USP54-MLLT10 USP54 chr10 75350706 MLLT10 chr10 21945338 Exonic hg19 NA M79063 Out-of-frame Intra-chr q22.2 p12.31 Oncogene 117385 ChimerSeq ChiTaRs ChiTaRs PFKFB2-DDHD1 PFKFB2 chr1 207251120 DDHD1 chr14 53509685 Exonic hg19 NA BE173373 Out-of-frame Inter-chr q32.1 q22.1 117386 ChimerSeq ChiTaRs ChiTaRs UBE2H-UBE2H UBE2H chr7 129549153 UBE2H chr7 129537021 Exonic hg19 NA U25433 Out-of-frame Intra-chr q32.2 q32.2 117387 ChimerSeq ChiTaRs ChiTaRs ANAPC16-ANAPC16 ANAPC16 chr10 73768764 ANAPC16 chr10 73768933 Exonic hg19 NA BE940443 Out-of-frame Intra-chr q22.1 q22.1 117388 ChimerSeq ChiTaRs ChiTaRs HPRT1-HNRPDL HPRT1 chrX 133634698 HNRPDL chr4 83349432 Exonic hg19 NA BE467833 3'UTR-3'UTR Inter-chr q26.2 117389 ChimerSeq ChiTaRs ChiTaRs GLUL-GLUL GLUL chr1 182353150 GLUL chr1 182357785 Exonic hg19 NA W27933 Out-of-frame Intra-chr q25.3 q25.3 117390 ChimerSeq ChiTaRs ChiTaRs ZFHX4-AMBRA1 ZFHX4 chr8 77699583 AMBRA1 chr11 46496512 Exonic hg19 NA AW389873 Out-of-frame Inter-chr q21.13 Transcription factor p11.2 117391 ChimerSeq ChiTaRs ChiTaRs PAX6-PAX6 PAX6 chr11 31815220 PAX6 chr11 31810938 Exonic hg19 NA EB361003 Out-of-frame Intra-chr p13 Tumor suppressor gene Transcription factor p13 Tumor suppressor gene Transcription factor 117392 ChimerSeq ChiTaRs ChiTaRs PDE4D-PDE4D PDE4D chr5 58676572 PDE4D chr5 58677085 Exonic hg19 NA DW442273 Out-of-frame Intra-chr q12.1 q12.1 117393 ChimerSeq ChiTaRs ChiTaRs CTSK-CTSK CTSK chr1 150771751 CTSK chr1 150768725 Exonic hg19 NA X82153 Out-of-frame Intra-chr q21.3 q21.3 117394 ChimerSeq ChiTaRs ChiTaRs PTPRZ1-HMCN1 PTPRZ1 chr7 121598632 HMCN1 chr1 185991008 Exonic hg19 NA BG958283 Out-of-frame Inter-chr q31.32 q25.3 117395 ChimerSeq ChiTaRs ChiTaRs PDE4D-KIAA1217 PDE4D chr5 58446420 KIAA1217 chr10 24835095 Exonic hg19 NA BF917173 Out-of-frame Inter-chr q12.1 p12.2 117396 ChimerSeq ChiTaRs ChiTaRs ZNF638-ZNF638 ZNF638 chr2 71660409 ZNF638 chr2 71661870 Exonic hg19 NA AW939263 Out-of-frame Intra-chr p13.3 p13.3 117397 ChimerSeq ChiTaRs ChiTaRs NUDCD2-BACH2 NUDCD2 chr5 162887049 BACH2 chr6 90644826 Exonic hg19 NA AA737193 Out-of-frame Inter-chr q34 q15 Transcription factor 117398 ChimerSeq ChiTaRs ChiTaRs CSNK1A1-CSNK1A1 CSNK1A1 chr5 148896602 CSNK1A1 chr5 148896619 Exonic hg19 NA AW265513 Out-of-frame Intra-chr q32 Tumor suppressor gene q32 Tumor suppressor gene 117399 ChimerSeq ChiTaRs ChiTaRs HDAC11-HDAC11 HDAC11 chr3 13537168 HDAC11 chr3 13537186 Exonic hg19 NA CV385793 Out-of-frame Intra-chr p25.1 p25.1 117400 ChimerSeq ChiTaRs ChiTaRs POLR1A-PILRA POLR1A chr2 86269114 PILRA chr7 99973792 Exonic hg19 NA BE550643 Out-of-frame Inter-chr p11.2 q22.1 117401 ChimerSeq ChiTaRs ChiTaRs DAB2-DAB2 DAB2 chr5 39377384 DAB2 chr5 39376752 Exonic hg19 NA BQ369293 In-Frame Intra-chr p13.1 Tumor suppressor gene p13.1 Tumor suppressor gene 117402 ChimerSeq ChiTaRs ChiTaRs MAGOH-SH3GL1 MAGOH chr1 53702155 SH3GL1 chr19 4383396 Exonic hg19 NA AK130943 Out-of-frame Inter-chr p32.3 Oncogene p13.3 117403 ChimerSeq ChiTaRs ChiTaRs CDCA8-ZNF395 CDCA8 chr1 38174663 ZNF395 chr8 28204817 Exonic hg19 NA BG014393 Out-of-frame Inter-chr p34.3 p21.1 Transcription factor 117404 ChimerSeq ChiTaRs ChiTaRs WDFY3-ZNF578 WDFY3 chr4 85634225 ZNF578 chr19 52994298 Exonic hg19 NA R47413 Out-of-frame Inter-chr q21.23 q13.41 Transcription factor 117405 ChimerSeq ChiTaRs ChiTaRs GRAMD3-GLUL GRAMD3 chr5 125827422 GLUL chr1 182352164 Exonic hg19 NA BF925573 Out-of-frame Inter-chr q23.2 q25.3 117406 ChimerSeq ChiTaRs ChiTaRs USP19-POMT1 USP19 chr3 49149040 POMT1 chr9 134385504 Exonic hg19 NA CR977283 Out-of-frame Inter-chr p21.31 q34.13 117407 ChimerSeq ChiTaRs ChiTaRs CDK13-SMG7 CDK13 chr7 40043102 SMG7 chr1 183512092 Exonic hg19 NA BI014023 Out-of-frame Inter-chr p14.1 q25.3 117408 ChimerSeq ChiTaRs ChiTaRs RGS12-ZNF587 RGS12 chr4 3295499 ZNF587 chr19 58307020 Exonic hg19 NA T05253 Out-of-frame Inter-chr p16.3 q13.43 Transcription factor 117409 ChimerSeq ChiTaRs ChiTaRs NNT-PHF21A NNT chr5 43681911 PHF21A chr11 45966921 Exonic hg19 NA AI444583 Out-of-frame Inter-chr p12 p11.2 Transcription factor 117410 ChimerSeq ChiTaRs ChiTaRs KAZN-LLGL2 KAZN chr1 15071758 LLGL2 chr17 73570434 Exonic hg19 NA AI655823 Out-of-frame Inter-chr p36.21 q25.1 117411 ChimerSeq ChiTaRs ChiTaRs KIAA1217-DNAJC17 KIAA1217 chr10 24824992 DNAJC17 chr15 41064050 Exonic hg19 NA BF091043 Out-of-frame Inter-chr p12.2 q15.1 117412 ChimerSeq ChiTaRs ChiTaRs LOC100507266-MYL12A LOC100507266 chr4 4628782 MYL12A chr18 3247826 Exonic hg19 NA BF825733 Out-of-frame Inter-chr p11.31 117413 ChimerSeq ChiTaRs ChiTaRs SCFD2-SCFD2 SCFD2 chr4 53768361 SCFD2 chr4 53770187 Exonic hg19 NA BF368683 Out-of-frame Intra-chr q12 q12 117414 ChimerSeq ChiTaRs ChiTaRs TGFBI-TGFBI TGFBI chr5 135391487 TGFBI chr5 135382990 Exonic hg19 NA CN483753 Out-of-frame Intra-chr q31.1 Tumor suppressor gene q31.1 Tumor suppressor gene 117415 ChimerSeq ChiTaRs ChiTaRs SOS1-SOS1 SOS1 chr2 39208993 SOS1 chr2 39208995 Exonic hg19 NA CA503093 Out-of-frame Intra-chr p22.1 p22.1 117416 ChimerSeq ChiTaRs ChiTaRs EIF2AK1-HEATR8-TTC4 EIF2AK1 chr7 6078304 HEATR8-TTC4 chr1 55181545 Exonic hg19 NA DA730893 Out-of-frame Inter-chr p22.1 117417 ChimerSeq ChiTaRs ChiTaRs TRIM27-MDM2 TRIM27 chr6 214484 MDM2 chr12 69234138 Exonic hg19 NA BX485283 Out-of-frame Inter-chr q15 Oncogene 117418 ChimerSeq ChiTaRs ChiTaRs FKTN-RPL39 FKTN chr9 108402299 RPL39 chrX 118920542 Exonic hg19 NA BF848943 Out-of-frame Inter-chr q31.2 q24 117419 ChimerSeq ChiTaRs ChiTaRs MAOA-ZFPM1 MAOA chrX 43579695 ZFPM1 chr16 88578237 Exonic hg19 NA BG995293 Out-of-frame Inter-chr p11.3 q24.2 Transcription factor 117420 ChimerSeq ChiTaRs ChiTaRs FGFR2-FGFR2 FGFR2 chr10 123263413 FGFR2 chr10 123256081 Exonic hg19 NA BG984043 Out-of-frame Intra-chr q26.13 TK:FGFR Oncogene q26.13 TK:FGFR Oncogene 117421 ChimerSeq ChiTaRs ChiTaRs IDS-IDS IDS chrX 148593151 IDS chrX 148571844 Exonic hg19 NA AW628693 5'UTR-CDS Intra-chr q28 q28 117422 ChimerSeq ChiTaRs ChiTaRs PI4K2A-ALDH3B1 PI4K2A chr10 99374414 ALDH3B1 chr11 67787229 Exonic hg19 NA AK129943 Out-of-frame Inter-chr q24.2 q13.2 117423 ChimerSeq ChiTaRs ChiTaRs UGT1A8-UGT1A8 UGT1A8 chr2 234601638 UGT1A8 chr2 234601642 Exonic hg19 NA J04093 Out-of-frame Intra-chr q37.1 q37.1 117424 ChimerSeq ChiTaRs ChiTaRs HNRNPU-RPL24 HNRNPU chr1 245027587 RPL24 chr3 101399952 Exonic hg19 NA D13413 Out-of-frame Inter-chr q44 q12.3 117425 ChimerSeq ChiTaRs ChiTaRs NRCAM-PNPLA8 NRCAM chr7 108096829 PNPLA8 chr7 108137985 Exonic hg19 NA DB472533 Out-of-frame Intra-chr q31.1 Tumor suppressor gene q31.1 117426 ChimerSeq ChiTaRs ChiTaRs SRRT-SRRT SRRT chr7 100472941 SRRT chr7 100480122 Exonic hg19 NA AA779653 Out-of-frame Intra-chr q22.1 q22.1 117427 ChimerSeq ChiTaRs ChiTaRs RARRES3-SSU72 RARRES3 chr11 63307017 SSU72 chr1 1477421 Exonic hg19 NA BG212153 Out-of-frame Inter-chr q12.3 Tumor suppressor gene p36.33 117428 ChimerSeq ChiTaRs ChiTaRs ATXN7-CP ATXN7 chr3 63951571 CP chr3 148911232 Exonic hg19 NA BG945303 Out-of-frame Intra-chr p14.1 q25.1 117429 ChimerSeq ChiTaRs ChiTaRs FHL1-SGCA FHL1 chrX 135293511 SGCA chr17 48252641 Exonic hg19 NA AJ710343 Out-of-frame Inter-chr q26.3 Tumor suppressor gene q21.33 117430 ChimerSeq ChiTaRs ChiTaRs PARP1-PARP1 PARP1 chr1 226579974 PARP1 chr1 226552748 Exonic hg19 NA AI380553 Out-of-frame Intra-chr q42.12 Oncogene Tumor suppressor gene q42.12 Oncogene Tumor suppressor gene 117431 ChimerSeq ChiTaRs ChiTaRs TMEM176B-SNIP1 TMEM176B chr7 150490243 SNIP1 chr1 38018376 Exonic hg19 NA BF871123 Out-of-frame Inter-chr q36.1 p34.3 117432 ChimerSeq ChiTaRs ChiTaRs RFWD2-LOC100507127 RFWD2 chr1 176110179 LOC100507127 chr10 6882754 Exonic hg19 NA C16953 Out-of-frame Inter-chr q25.2 Tumor suppressor gene 117433 ChimerSeq ChiTaRs ChiTaRs PDLIM7-PDLIM7 PDLIM7 chr5 176917322 PDLIM7 chr5 176919611 Exonic hg19 NA Z28913 Out-of-frame Intra-chr q35.3 q35.3 117434 ChimerSeq ChiTaRs ChiTaRs CLDN11-NCAM2 CLDN11 chr3 170150671 NCAM2 chr21 22628643 Exonic hg19 NA AF068863 Out-of-frame Inter-chr q26.2 q21.1 Tumor suppressor gene 117435 ChimerSeq ChiTaRs ChiTaRs PRRC2B-COPZ1 PRRC2B chr9 134366046 COPZ1 chr12 54744536 Exonic hg19 NA CV337403 Out-of-frame Inter-chr q34.13 q13.13 117436 ChimerSeq ChiTaRs ChiTaRs CTTNBP2-CTTNBP2 CTTNBP2 chr7 117400633 CTTNBP2 chr7 117400454 Exonic hg19 NA AW753433 Out-of-frame Intra-chr q31.31 q31.31 117437 ChimerSeq ChiTaRs ChiTaRs OOEP-EIF3A OOEP chr6 74083034 EIF3A chr10 120810761 Exonic hg19 NA BE706163 Out-of-frame Inter-chr q13 q26.11 117438 ChimerSeq ChiTaRs ChiTaRs PMS2P3-RPL38 PMS2P3 chr7 75157428 RPL38 chr17 72205948 Exonic hg19 NA BC046153 Out-of-frame Inter-chr q11.23 q25.1 117439 ChimerSeq ChiTaRs ChiTaRs BICD2-BICD2 BICD2 chr9 95475265 BICD2 chr9 95475234 Exonic hg19 NA BU070183 Out-of-frame Intra-chr q22.31 q22.31 117440 ChimerSeq ChiTaRs ChiTaRs PTPRVP-MBP PTPRVP chr1 202157017 MBP chr18 74691103 Exonic hg19 NA EB387673 Out-of-frame Inter-chr q32.1 q23 117441 ChimerSeq ChiTaRs ChiTaRs RHOBTB1-TFAP2A RHOBTB1 chr10 62633375 TFAP2A chr6 10398163 Exonic hg19 NA R77613 Out-of-frame Inter-chr q21.2 p24.3 Tumor suppressor gene Transcription factor 117442 ChimerSeq ChiTaRs ChiTaRs ZNHIT6-ZNF718 ZNHIT6 chr1 86119014 ZNF718 chr4 86169 Exonic hg19 NA AW610263 Out-of-frame Inter-chr p22.3 p16.3 Transcription factor 117443 ChimerSeq ChiTaRs ChiTaRs TTYH3-TTYH3 TTYH3 chr7 2704026 TTYH3 chr7 2703050 Exonic hg19 NA CX756063 Out-of-frame Intra-chr p22.3 p22.3 117444 ChimerSeq ChiTaRs ChiTaRs TAB2-SLC9B2 TAB2 chr6 149732652 SLC9B2 chr4 103946729 Exonic hg19 NA BF814363 Out-of-frame Inter-chr q25.1 q24 117445 ChimerSeq ChiTaRs ChiTaRs NFKBIZ-NFKBIZ NFKBIZ chr3 101578586 NFKBIZ chr3 101579341 Exonic hg19 NA DB319773 Out-of-frame Intra-chr q12.3 q12.3 117446 ChimerSeq ChiTaRs ChiTaRs C4orf19-C4orf19 C4orf19 chr4 37594740 C4orf19 chr4 37594260 Exonic hg19 NA CA450533 Out-of-frame Intra-chr p14 p14 117447 ChimerSeq ChiTaRs ChiTaRs TSPAN18-TSPAN18 TSPAN18 chr11 44953264 TSPAN18 chr11 44952272 Exonic hg19 NA BF737123 Out-of-frame Intra-chr p11.2 p11.2 117448 ChimerSeq ChiTaRs ChiTaRs IGFBP5-IGFBP5 IGFBP5 chr2 217538049 IGFBP5 chr2 217537943 Exonic hg19 NA CO245513 Out-of-frame Intra-chr q35 Tumor suppressor gene q35 Tumor suppressor gene 117449 ChimerSeq ChiTaRs ChiTaRs IAH1-ADAM17 IAH1 chr2 9629677 ADAM17 chr2 9673708 Exonic hg19 NA BF333103 Out-of-frame Intra-chr p25.1 p25.1 117450 ChimerSeq ChiTaRs ChiTaRs TNS3-VPS16 TNS3 chr7 47435257 VPS16 chr20 2843526 Exonic hg19 NA BI061793 Out-of-frame Inter-chr p12.3 p13 117451 ChimerSeq ChiTaRs ChiTaRs A1CF-ANKDD1A A1CF chr10 52623842 ANKDD1A chr15 65245027 Exonic hg19 NA BC022263 Out-of-frame Inter-chr q11.23 q22.31 117452 ChimerSeq ChiTaRs ChiTaRs PDIA5-PDIA5 PDIA5 chr3 122854775 PDIA5 chr3 122850280 Exonic hg19 NA AI033823 Out-of-frame Intra-chr q21.1 q21.1 117453 ChimerSeq ChiTaRs ChiTaRs CCNYL1-IDH1 CCNYL1 chr2 208576841 IDH1 chr2 209100951 Exonic hg19 NA BC065703 Out-of-frame Intra-chr q33.3 q34 Oncogene Tumor suppressor gene 117454 ChimerSeq ChiTaRs ChiTaRs COL5A1-COL5A1 COL5A1 chr9 137622237 COL5A1 chr9 137727025 Exonic hg19 NA BG995263 Out-of-frame Intra-chr q34.3 q34.3 117455 ChimerSeq ChiTaRs ChiTaRs SORCS3-REC8 SORCS3 chr10 106961058 REC8 chr14 24649336 Exonic hg19 NA T07523 Out-of-frame Inter-chr q25.1 q12 117456 ChimerSeq ChiTaRs ChiTaRs RB1CC1-SMARCC2 RB1CC1 chr8 53620400 SMARCC2 chr12 56575339 Exonic hg19 NA BF817683 Out-of-frame Inter-chr q11.23 Tumor suppressor gene q13.2 117457 ChimerSeq ChiTaRs ChiTaRs LPP-LPP LPP chr3 188596444 LPP chr3 188596460 Exonic hg19 NA AA747103 Out-of-frame Intra-chr q27.3 Oncogene q27.3 Oncogene 117458 ChimerSeq ChiTaRs ChiTaRs UNC5B-UNC5B UNC5B chr10 73060876 UNC5B chr10 73060071 Exonic hg19 NA BG403733 Out-of-frame Intra-chr q22.1 Tumor suppressor gene q22.1 Tumor suppressor gene 117459 ChimerSeq ChiTaRs ChiTaRs STEAP3-SHISA5 STEAP3 chr2 120023213 SHISA5 chr3 48509620 Exonic hg19 NA BQ920013 Out-of-frame Inter-chr q14.2 p21.31 117460 ChimerSeq ChiTaRs ChiTaRs GNB2L1-GNB2L1 GNB2L1 chr5 180665174 GNB2L1 chr5 180665208 Exonic hg19 NA BE003913 Out-of-frame Intra-chr Tumor suppressor gene Tumor suppressor gene 117461 ChimerSeq ChiTaRs ChiTaRs TBC1D7-TBC1D7 TBC1D7 chr6 13327757 TBC1D7 chr6 13327953 Exonic hg19 NA AA814753 Out-of-frame Intra-chr p24.1 p24.1 117462 ChimerSeq ChiTaRs ChiTaRs LY6E-LY6E LY6E chr8 144103826 LY6E chr8 144103341 Exonic hg19 NA N95373 Out-of-frame Intra-chr 117463 ChimerSeq ChiTaRs ChiTaRs KIAA1257-KIAA1257 KIAA1257 chr3 128635628 KIAA1257 chr3 128635195 Exonic hg19 NA CN479033 Out-of-frame Intra-chr q21.3 q21.3 117464 ChimerSeq ChiTaRs ChiTaRs ATP11C-MALAT1 ATP11C chrX 138845718 MALAT1 chr11 65266516 Exonic hg19 NA BG616623 Out-of-frame Inter-chr q27.1 q13.1 117465 ChimerSeq ChiTaRs ChiTaRs RASL11B-CSRNP3 RASL11B chr4 53732076 CSRNP3 chr2 166377694 Exonic hg19 NA T20253 Out-of-frame Inter-chr q12 q24.3 Transcription factor 117466 ChimerSeq ChiTaRs ChiTaRs CHID1-PLCL1 CHID1 chr11 874598 PLCL1 chr2 198948479 Exonic hg19 NA DN990483 Out-of-frame Inter-chr p15.5 q33.1 117467 ChimerSeq ChiTaRs ChiTaRs CCT5-CCT5 CCT5 chr5 10258363 CCT5 chr5 10258550 Exonic hg19 NA BE078213 Out-of-frame Intra-chr p15.2 p15.2 117468 ChimerSeq ChiTaRs ChiTaRs TMCC1-ANKHD1 TMCC1 chr3 129495192 ANKHD1 chr5 139802014 Exonic hg19 NA U58663 Out-of-frame Inter-chr q22.1 q31.3 117469 ChimerSeq ChiTaRs ChiTaRs MAPK9-ITPR1 MAPK9 chr5 179660926 ITPR1 chr3 4747922 Exonic hg19 NA AI361133 Out-of-frame Inter-chr q35.3 Tumor suppressor gene p26.1 117470 ChimerSeq ChiTaRs ChiTaRs JMJD1C-JMJD1C JMJD1C chr10 64966489 JMJD1C chr10 64966490 Exonic hg19 NA AA805863 Out-of-frame Intra-chr q21.3 q21.3 117471 ChimerSeq ChiTaRs ChiTaRs ABCB6-ABCB6 ABCB6 chr2 220084267 ABCB6 chr2 220084102 Exonic hg19 NA BE378883 Out-of-frame Intra-chr q35 q35 117472 ChimerSeq ChiTaRs ChiTaRs MTR-CCAR1 MTR chr1 237061603 CCAR1 chr10 70525705 Exonic hg19 NA AW841013 Out-of-frame Inter-chr q43 Oncogene q21.3 Tumor suppressor gene 117473 ChimerSeq ChiTaRs ChiTaRs NOL10-NOL10 NOL10 chr2 10711980 NOL10 chr2 10711781 Exonic hg19 NA AA887153 Out-of-frame Intra-chr p25.1 p25.1 117474 ChimerSeq ChiTaRs ChiTaRs UBAP2-UBAP1 UBAP2 chr9 34048892 UBAP1 chr9 34220905 Exonic hg19 NA DA792563 5'UTR-5'UTR Intra-chr p13.3 p13.3 117475 ChimerSeq ChiTaRs ChiTaRs PSMC2-PTPRF PSMC2 chr7 103008013 PTPRF chr1 44010784 Exonic hg19 NA BQ315283 Out-of-frame Inter-chr q22.1 p34.2 117476 ChimerSeq ChiTaRs ChiTaRs C9orf9-RMND5A C9orf9 chr9 135759585 RMND5A chr2 87009936 Exonic hg19 NA CD696863 Out-of-frame Inter-chr p11.2 117477 ChimerSeq ChiTaRs ChiTaRs MAP1B-C9orf85 MAP1B chr5 71491639 C9orf85 chr9 74573939 Exonic hg19 NA AW882863 Out-of-frame Inter-chr q13.2 q21.13 117478 ChimerSeq ChiTaRs ChiTaRs TCEA3-TCEA3 TCEA3 chr1 23734655 TCEA3 chr1 23743331 Exonic hg19 NA AW812473 Out-of-frame Intra-chr 117479 ChimerSeq ChiTaRs ChiTaRs RTN4-RTN4 RTN4 chr2 55214836 RTN4 chr2 55209651 Exonic hg19 NA BE694253 Out-of-frame Intra-chr p16.1 Tumor suppressor gene p16.1 Tumor suppressor gene 117480 ChimerSeq ChiTaRs ChiTaRs EBNA1BP2-WWOX EBNA1BP2 chr1 43736343 WWOX chr16 78615369 Exonic hg19 NA BG547073 Out-of-frame Inter-chr p34.2 q23.1 Tumor suppressor gene 117481 ChimerSeq ChiTaRs ChiTaRs TANC1-TMEM2 TANC1 chr2 160001698 TMEM2 chr9 74360117 Exonic hg19 NA BF853743 Out-of-frame Inter-chr q24.2 q21.13 117482 ChimerSeq ChiTaRs ChiTaRs BBX-BBX BBX chr3 107493617 BBX chr3 107497224 Exonic hg19 NA BI033303 Out-of-frame Intra-chr q13.12 Transcription factor q13.12 Transcription factor 117483 ChimerSeq ChiTaRs ChiTaRs KYNU-KYNU KYNU chr2 143747106 KYNU chr2 143746729 Exonic hg19 NA CB851853 3'UTR-CDS Intra-chr q22.2 q22.2 117484 ChimerSeq ChiTaRs ChiTaRs KIAA1958-KIAA1958 KIAA1958 chr9 115380814 KIAA1958 chr9 115387290 Exonic hg19 NA BX506983 Out-of-frame Intra-chr q32 q32 117485 ChimerSeq ChiTaRs ChiTaRs NBPF11-GPR107 NBPF11 chr1 146076151 GPR107 chr9 132873621 Exonic hg19 NA AW850213 Out-of-frame Inter-chr q21.2 q34.11 117486 ChimerSeq ChiTaRs ChiTaRs LZTS2-LZTS2 LZTS2 chr10 102766570 LZTS2 chr10 102763431 Exonic hg19 NA BM462893 Out-of-frame Intra-chr q24.31 q24.31 117487 ChimerSeq ChiTaRs ChiTaRs LOC100507032-LOC100507032 LOC100507032 chr3 129615828 LOC100507032 chr3 129614252 Exonic hg19 NA BM984293 Out-of-frame Intra-chr 117488 ChimerSeq ChiTaRs ChiTaRs HINT1-HINT1 HINT1 chr5 130498340 HINT1 chr5 130494987 Exonic hg19 NA BG028183 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene 117489 ChimerSeq ChiTaRs ChiTaRs RPS24-CPEB2 RPS24 chr10 79800454 CPEB2 chr4 15068957 Exonic hg19 NA N33853 Out-of-frame Inter-chr q22.3 117490 ChimerSeq ChiTaRs ChiTaRs ANXA6-ANXA6 ANXA6 chr5 150506007 ANXA6 chr5 150507752 Exonic hg19 NA BF333653 Out-of-frame Intra-chr q33.1 q33.1 117491 ChimerSeq ChiTaRs ChiTaRs ZAK-ZAK ZAK chr2 174091439 ZAK chr2 174086288 Exonic hg19 NA AW629613 Out-of-frame Intra-chr TKL:MLK TKL:MLK 117492 ChimerSeq ChiTaRs ChiTaRs KIF2C-CHTF8 KIF2C chr1 45233407 CHTF8 chr16 69154359 Exonic hg19 NA CN388633 Out-of-frame Inter-chr p34.1 q22.1 117493 ChimerSeq ChiTaRs ChiTaRs DCAF10-DCAF10 DCAF10 chr9 37862005 DCAF10 chr9 37861655 Exonic hg19 NA BU737313 Out-of-frame Intra-chr p13.2 p13.2 117494 ChimerSeq ChiTaRs ChiTaRs IKBKB-IKBKB IKBKB chr8 42177593 IKBKB chr8 42178105 Exonic hg19 NA CA436493 Out-of-frame Intra-chr p11.21 Oncogene p11.21 Oncogene 117495 ChimerSeq ChiTaRs ChiTaRs GNAI2-H19 GNAI2 chr3 50296780 H19 chr11 2018056 Exonic hg19 NA AI377593 Out-of-frame Inter-chr p21.31 p15.5 Tumor suppressor gene 117496 ChimerSeq ChiTaRs ChiTaRs PTMA-ANKRD28 PTMA chr2 232577597 ANKRD28 chr3 15711763 Exonic hg19 NA BQ900403 Out-of-frame Inter-chr q37.1 p25.1 117497 ChimerSeq ChiTaRs ChiTaRs CD81-TRA@ CD81 chr11 2418518 TRA@ chr14 22362568 Exonic hg19 NA BP418453 Out-of-frame Inter-chr p15.5 q11.2 117498 ChimerSeq ChiTaRs ChiTaRs ADI1-TRIM14 ADI1 chr2 3523279 TRIM14 chr9 100848713 Exonic hg19 NA BM456873 Out-of-frame Inter-chr q22.33 117499 ChimerSeq ChiTaRs ChiTaRs MAN2B2-TP63 MAN2B2 chr4 6595070 TP63 chr3 189578930 Exonic hg19 NA BQ331863 Out-of-frame Inter-chr p16.1 q28 Tumor suppressor gene Transcription factor 117500 ChimerSeq ChiTaRs ChiTaRs TRAF3IP3-C19orf70 TRAF3IP3 chr1 209952705 C19orf70 chr19 5680088 Exonic hg19 NA BF847263 Out-of-frame Inter-chr q32.2 p13.3 117501 ChimerSeq ChiTaRs ChiTaRs ACTR3-XIST ACTR3 chr2 114668830 XIST chrX 73068278 Exonic hg19 NA BF378923 Out-of-frame Inter-chr q14.1 q13.2 Tumor suppressor gene 117502 ChimerSeq ChiTaRs ChiTaRs CFB-NCL CFB chr6 3247163 NCL chr2 232319957 Exonic hg19 NA AI904273 Out-of-frame Inter-chr q37.1 117503 ChimerSeq ChiTaRs ChiTaRs KDM4A-KDM4A KDM4A chr1 44144006 KDM4A chr1 44144545 Exonic hg19 NA CV381433 Out-of-frame Intra-chr p34.2 p34.2 117504 ChimerSeq ChiTaRs ChiTaRs PIGF-C14orf159 PIGF chr2 46844169 C14orf159 chr14 91691027 Exonic hg19 NA BC039303 5'UTR-CDS Inter-chr p21 q32.11 117505 ChimerSeq ChiTaRs ChiTaRs RPS18-RPS18 RPS18 chr6 4720408 RPS18 chr6 4720405 Exonic hg19 NA AW865643 Out-of-frame Intra-chr 117506 ChimerSeq ChiTaRs ChiTaRs KNDC1-JUP KNDC1 chr10 135014769 JUP chr17 39845297 Exonic hg19 NA BF772143 Out-of-frame Inter-chr q26.3 q21.2 Tumor suppressor gene 117507 ChimerSeq ChiTaRs ChiTaRs GNB2-GNB2 GNB2 chr7 100275916 GNB2 chr7 100276623 Exonic hg19 NA BQ326073 Out-of-frame Intra-chr q22.1 q22.1 117508 ChimerSeq ChiTaRs ChiTaRs MAP1B-CACNA1C MAP1B chr5 71490371 CACNA1C chr12 2801291 Exonic hg19 NA BF960613 Out-of-frame Inter-chr q13.2 p13.33 117509 ChimerSeq ChiTaRs ChiTaRs UPF2-GLUD1 UPF2 chr10 12071176 GLUD1 chr10 88811189 Exonic hg19 NA BI054523 Out-of-frame Intra-chr p14 q23.2 117510 ChimerSeq ChiTaRs ChiTaRs RIOK1-IQCJ-SCHIP1 RIOK1 chr6 7414571 IQCJ-SCHIP1 chr3 159346155 Exonic hg19 NA BF359973 Out-of-frame Inter-chr p24.3 Atypical:RIO q25.32 117511 ChimerSeq ChiTaRs ChiTaRs SSR1-SSR1 SSR1 chr6 7284437 SSR1 chr6 7284949 Exonic hg19 NA AK025753 Out-of-frame Intra-chr p24.3 p24.3 117512 ChimerSeq ChiTaRs ChiTaRs RENBP-RAD23A RENBP chrX 153205712 RAD23A chr19 13059069 Exonic hg19 NA BF799253 Out-of-frame Inter-chr q28 p13.13 117513 ChimerSeq ChiTaRs ChiTaRs TMED5-R3HDM1 TMED5 chr1 93645903 R3HDM1 chr2 136432890 Exonic hg19 NA AI681273 Out-of-frame Inter-chr p22.1 q21.3 117514 ChimerSeq ChiTaRs ChiTaRs UTRN-CKAP4 UTRN chr6 144806580 CKAP4 chr12 106631834 Exonic hg19 NA BF750813 Out-of-frame Inter-chr q24.2 q23.3 117515 ChimerSeq ChiTaRs ChiTaRs CD74-CD74 CD74 chr5 149781270 CD74 chr5 149781582 Exonic hg19 NA BU618143 Out-of-frame Intra-chr q33.1 q33.1 117516 ChimerSeq ChiTaRs ChiTaRs OXR1-LRCH4 OXR1 chr8 107285002 LRCH4 chr7 100179483 Exonic hg19 NA AW182813 Out-of-frame Inter-chr q23.1 q22.1 117517 ChimerSeq ChiTaRs ChiTaRs BET1L-BET1L BET1L chr11 204107 BET1L chr11 204491 Exonic hg19 NA AW939813 Out-of-frame Intra-chr p15.5 p15.5 117518 ChimerSeq ChiTaRs ChiTaRs A1CF-A1CF A1CF chr10 52566513 A1CF chr10 52566487 Exonic hg19 NA AW300983 Out-of-frame Intra-chr q11.23 q11.23 117519 ChimerSeq ChiTaRs ChiTaRs USP54-PARP11 USP54 chr10 75257668 PARP11 chr12 3936782 Exonic hg19 NA BG996713 Out-of-frame Inter-chr q22.2 p13.32 117520 ChimerSeq ChiTaRs ChiTaRs IL6ST-BTG2 IL6ST chr5 55240885 BTG2 chr1 203276712 Exonic hg19 NA AI660373 Out-of-frame Inter-chr q11.2 Oncogene q32.1 Tumor suppressor gene 117521 ChimerSeq ChiTaRs ChiTaRs S100A6-ANAPC2 S100A6 chr1 153507300 ANAPC2 chr9 140073196 Exonic hg19 NA BQ009213 Out-of-frame Inter-chr q21.3 q34.3 117522 ChimerSeq ChiTaRs ChiTaRs SKI-PDF SKI chr1 2241652 PDF chr16 69363212 Exonic hg19 NA BE465503 3'UTR-CDS Inter-chr p36.33 Transcription factor q22.1 117523 ChimerSeq ChiTaRs ChiTaRs ZC2HC1A-GSS ZC2HC1A chr8 79629741 GSS chr20 33530340 Exonic hg19 NA AI802443 Out-of-frame Inter-chr q21.13 q11.22 117524 ChimerSeq ChiTaRs ChiTaRs CERKL-FOXJ3 CERKL chr2 182418241 FOXJ3 chr1 42644080 Exonic hg19 NA BU181033 Out-of-frame Inter-chr q31.3 p34.2 Transcription factor 117525 ChimerSeq ChiTaRs ChiTaRs RASAL2-PPM1G RASAL2 chr1 178420761 PPM1G chr2 27604630 Exonic hg19 NA CB851163 Out-of-frame Inter-chr q25.2 Tumor suppressor gene p23.3 117526 ChimerSeq ChiTaRs ChiTaRs LOC100131434-IDS LOC100131434 chrX 148626977 IDS chrX 148571843 Exonic hg19 NA U66053 Out-of-frame Intra-chr q28 117527 ChimerSeq ChiTaRs ChiTaRs TTC1-IL32 TTC1 chr5 159492039 IL32 chr16 3118179 Exonic hg19 NA AW380713 Out-of-frame Inter-chr q33.3 p13.3 117528 ChimerSeq ChiTaRs ChiTaRs EFNA5-IQGAP1 EFNA5 chr5 106880703 IQGAP1 chr15 91034581 Exonic hg19 NA BF094243 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q26.1 117529 ChimerSeq ChiTaRs ChiTaRs TGFBRAP1-RPLP2 TGFBRAP1 chr2 105946138 RPLP2 chr11 810003 Exonic hg19 NA BC010093 Out-of-frame Inter-chr q12.2 p15.5 117530 ChimerSeq ChiTaRs ChiTaRs MAT2A-GSS MAT2A chr2 85771663 GSS chr20 33533756 Exonic hg19 NA BF746473 Out-of-frame Inter-chr p11.2 Tumor suppressor gene q11.22 117531 ChimerSeq ChiTaRs ChiTaRs GDEP-SPTAN1 GDEP chr4 80798924 SPTAN1 chr9 131395489 Exonic hg19 NA BG055063 Out-of-frame Inter-chr q34.11 117532 ChimerSeq ChiTaRs ChiTaRs INPP5E-INPP5E INPP5E chr9 139327518 INPP5E chr9 139324798 Exonic hg19 NA CN331953 Out-of-frame Intra-chr q34.3 q34.3 117533 ChimerSeq ChiTaRs ChiTaRs TRAPPC9-SPTAN1 TRAPPC9 chr8 141105485 SPTAN1 chr9 131380275 Exonic hg19 NA BF949933 Out-of-frame Inter-chr q24.3 q34.11 117534 ChimerSeq ChiTaRs ChiTaRs ARL8A-ARL8A ARL8A chr1 202103387 ARL8A chr1 202102704 Exonic hg19 NA AW294763 Out-of-frame Intra-chr q32.1 q32.1 117535 ChimerSeq ChiTaRs ChiTaRs CD34-DBN1 CD34 chr1 208061157 DBN1 chr5 176887485 Exonic hg19 NA AW351463 Out-of-frame Inter-chr q32.2 q35.3 117536 ChimerSeq ChiTaRs ChiTaRs DPP10-SPAST DPP10 chr2 115421957 SPAST chr2 32381362 Exonic hg19 NA H12023 Out-of-frame Intra-chr q14.1 p22.3 117537 ChimerSeq ChiTaRs ChiTaRs ECE2-HOXB9 ECE2 chr3 183977294 HOXB9 chr17 46702874 Exonic hg19 NA BF063373 Out-of-frame Inter-chr q27.1 q21.32 Transcription factor 117538 ChimerSeq ChiTaRs ChiTaRs LCN2-MKL2 LCN2 chr9 130915731 MKL2 chr16 14332499 Exonic hg19 NA BU742073 Out-of-frame Inter-chr q34.11 p13.12 117539 ChimerSeq ChiTaRs ChiTaRs MAGI2-MAP6D1 MAGI2 chr7 77756650 MAP6D1 chr3 183537338 Exonic hg19 NA BE703283 Out-of-frame Inter-chr q21.11 q27.1 117540 ChimerSeq ChiTaRs ChiTaRs FOXP1-FOXP1 FOXP1 chr3 71406477 FOXP1 chr3 71406236 Exonic hg19 NA T11883 Out-of-frame Intra-chr p13 Oncogene Tumor suppressor gene Transcription factor p13 Oncogene Tumor suppressor gene Transcription factor 117541 ChimerSeq ChiTaRs ChiTaRs ANXA5-ANXA5 ANXA5 chr4 122589320 ANXA5 chr4 122589152 Exonic hg19 NA BF034543 Out-of-frame Intra-chr q27 q27 117542 ChimerSeq ChiTaRs ChiTaRs MEF2D-P2RX1 MEF2D chr1 156434628 P2RX1 chr17 3802408 Exonic hg19 NA BQ368243 Out-of-frame Inter-chr q22 Transcription factor p13.2 117543 ChimerSeq ChiTaRs ChiTaRs CAMLG-CAMLG CAMLG chr5 134079927 CAMLG chr5 134078863 Exonic hg19 NA CR738213 Out-of-frame Intra-chr q31.1 q31.1 117544 ChimerSeq ChiTaRs ChiTaRs PID1-SKIL PID1 chr2 229973255 SKIL chr3 170114493 Exonic hg19 NA BC020883 Out-of-frame Inter-chr q36.3 q26.2 Tumor suppressor gene Transcription factor 117545 ChimerSeq ChiTaRs ChiTaRs CEP85L-CUL1 CEP85L chr6 119031250 CUL1 chr7 148427054 Exonic hg19 NA DB140993 Out-of-frame Inter-chr q22.31 q36.1 Tumor suppressor gene 117546 ChimerSeq ChiTaRs ChiTaRs WEE1-EFHA1 WEE1 chr11 9598759 EFHA1 chr13 22069398 Exonic hg19 NA BE002633 Out-of-frame Inter-chr p15.4 117547 ChimerSeq ChiTaRs ChiTaRs MRPS16-MRPS16 MRPS16 chr10 75010629 MRPS16 chr10 75010641 Exonic hg19 NA BU679813 Out-of-frame Intra-chr q22.2 q22.2 117548 ChimerSeq ChiTaRs ChiTaRs PCDH10-CHMP1A PCDH10 chr4 134071876 CHMP1A chr16 89712225 Exonic hg19 NA BG008253 Out-of-frame Inter-chr q28.3 Tumor suppressor gene q24.3 117549 ChimerSeq ChiTaRs ChiTaRs MGLL-HDLBP MGLL chr3 127509373 HDLBP chr2 242169019 Exonic hg19 NA BI014363 Out-of-frame Inter-chr q21.3 q37.3 117550 ChimerSeq ChiTaRs ChiTaRs NID1-FAM92A1 NID1 chr1 236197498 FAM92A1 chr8 94720761 Exonic hg19 NA BU743023 Out-of-frame Inter-chr q42.3 117551 ChimerSeq ChiTaRs ChiTaRs MGMT-NBPF14 MGMT chr10 131395578 NBPF14 chr1 145112817 Exonic hg19 NA BF996063 Out-of-frame Inter-chr q26.3 q21.2 117552 ChimerSeq ChiTaRs ChiTaRs MOB2-MOB2 MOB2 chr11 1494475 MOB2 chr11 1490687 Exonic hg19 NA BX537373 Out-of-frame Intra-chr p15.5 p15.5 117553 ChimerSeq ChiTaRs ChiTaRs ITGA2-MIR31HG ITGA2 chr5 52285618 MIR31HG chr9 21499156 Exonic hg19 NA BF913923 Out-of-frame Inter-chr q11.2 p21.3 117554 ChimerSeq ChiTaRs ChiTaRs CPSF7-CHN2 CPSF7 chr11 61187511 CHN2 chr7 29259028 Exonic hg19 NA BF091403 Out-of-frame Inter-chr q12.2 p14.3 117555 ChimerSeq ChiTaRs ChiTaRs EGFLAM-INPP4B EGFLAM chr5 38320731 INPP4B chr4 143072468 Exonic hg19 NA BG952183 Out-of-frame Inter-chr p13.2 q31.21 Tumor suppressor gene 117556 ChimerSeq ChiTaRs ChiTaRs NFE2L2-NFE2L2 NFE2L2 chr2 178107880 NFE2L2 chr2 178107120 Exonic hg19 NA DB348953 Out-of-frame Intra-chr q31.2 Oncogene Transcription factor q31.2 Oncogene Transcription factor 117557 ChimerSeq ChiTaRs ChiTaRs STAMBPL1-STAMBPL1 STAMBPL1 chr10 90707746 STAMBPL1 chr10 90707072 Exonic hg19 NA BE834613 Out-of-frame Intra-chr q23.31 q23.31 117558 ChimerSeq ChiTaRs ChiTaRs RNF145-MAN1C1 RNF145 chr5 158624266 MAN1C1 chr1 25944341 Exonic hg19 NA AF318353 Out-of-frame Inter-chr q33.3 p36.11 117559 ChimerSeq ChiTaRs ChiTaRs PCBP1-AS1-PCBP1-AS1 PCBP1-AS1 chr2 70264156 PCBP1-AS1 chr2 70265772 Exonic hg19 NA BQ082423 Out-of-frame Intra-chr p13.3 p13.3 Tumor suppressor gene 117560 ChimerSeq ChiTaRs ChiTaRs ZNF204P-THEM6 ZNF204P chr6 27343030 THEM6 chr8 143816741 Exonic hg19 NA DA088763 Out-of-frame Inter-chr p22.1 q24.3 117561 ChimerSeq ChiTaRs ChiTaRs CPA4-CPA4 CPA4 chr7 129946369 CPA4 chr7 129962403 Exonic hg19 NA BF738633 Out-of-frame Intra-chr q32.2 q32.2 117562 ChimerSeq ChiTaRs ChiTaRs KIAA1549-GTF3A KIAA1549 chr7 138604136 GTF3A chr13 27998782 Exonic hg19 NA BC013363 Out-of-frame Inter-chr q34 q12.2 Transcription factor 117563 ChimerSeq ChiTaRs ChiTaRs DPYSL3-DCTN1 DPYSL3 chr5 146770492 DCTN1 chr2 74596589 Exonic hg19 NA AI669553 Out-of-frame Inter-chr q32 p13.1 117564 ChimerSeq ChiTaRs ChiTaRs GRM4-STXBP5L GRM4 chr6 33989802 STXBP5L chr3 120848266 Exonic hg19 NA CK002943 Out-of-frame Inter-chr p21.31 q13.33 117565 ChimerSeq ChiTaRs ChiTaRs MAP3K5-MAP3K5 MAP3K5 chr6 137041728 MAP3K5 chr6 137015278 Exonic hg19 NA BF960533 Out-of-frame Intra-chr q23.3 STE:STE11 q23.3 STE:STE11 117566 ChimerSeq ChiTaRs ChiTaRs USP42-RUNX1 USP42 chr7 6151080 RUNX1 chr21 36167216 Exonic hg19 NA FR727327 Out-of-frame Inter-chr p22.1 q22.12 Oncogene Tumor suppressor gene Transcription factor 117567 ChimerSeq ChiTaRs ChiTaRs BRK1-KIAA0247 BRK1 chr3 10168601 KIAA0247 chr14 70142753 Exonic hg19 NA DB305973 Out-of-frame Inter-chr p25.3 117568 ChimerSeq ChiTaRs ChiTaRs PALLD-PALLD PALLD chr4 169702522 PALLD chr4 169702213 Exonic hg19 NA BF990953 Out-of-frame Intra-chr q32.3 q32.3 117569 ChimerSeq ChiTaRs ChiTaRs AASDH-AASDH AASDH chr4 57252172 AASDH chr4 57249807 Exonic hg19 NA AA731353 Out-of-frame Intra-chr q12 q12 117570 ChimerSeq ChiTaRs ChiTaRs ACTR3-ABT1 ACTR3 chr2 114670806 ABT1 chr6 26597228 Exonic hg19 NA BG479983 Out-of-frame Inter-chr q14.1 p22.2 117571 ChimerSeq ChiTaRs ChiTaRs NCL-PLXNB1 NCL chr2 232319949 PLXNB1 chr3 48445976 Exonic hg19 NA BI042033 Out-of-frame Inter-chr q37.1 p21.31 117572 ChimerSeq ChiTaRs ChiTaRs WDR33-CRBN WDR33 chr2 128517871 CRBN chr3 3197420 Exonic hg19 NA BE061083 Out-of-frame Inter-chr q14.3 p26.2 Oncogene 117573 ChimerSeq ChiTaRs ChiTaRs SLC40A1-BCCIP SLC40A1 chr2 190426715 BCCIP chr10 127527734 Exonic hg19 NA BU676833 Out-of-frame Inter-chr q32.2 q26.2 117574 ChimerSeq ChiTaRs ChiTaRs LTV1-LTV1 LTV1 chr6 144178582 LTV1 chr6 144171286 Exonic hg19 NA AY326463 Out-of-frame Intra-chr q24.2 q24.2 117575 ChimerSeq ChiTaRs ChiTaRs CGA-RAB1A CGA chr6 87795292 RAB1A chr2 65357061 Exonic hg19 NA C19023 Out-of-frame Inter-chr q14.3 p14 117576 ChimerSeq ChiTaRs ChiTaRs CD58-CD58 CD58 chr1 117063191 CD58 chr1 117062984 Exonic hg19 NA BU680103 Out-of-frame Intra-chr p13.1 p13.1 117577 ChimerSeq ChiTaRs ChiTaRs TAMM41-RAB1B TAMM41 chr3 11872477 RAB1B chr11 66044823 Exonic hg19 NA AK093703 Out-of-frame Inter-chr p25.2 q13.2 117578 ChimerSeq ChiTaRs ChiTaRs GNL3L-GNL3L GNL3L chrX 54589047 GNL3L chrX 54590246 Exonic hg19 NA BE859073 Out-of-frame Intra-chr p11.22 p11.22 117579 ChimerSeq ChiTaRs ChiTaRs GSN-LUC7L GSN chr9 124088808 LUC7L chr16 319056 Exonic hg19 NA M78183 Out-of-frame Inter-chr q33.2 Tumor suppressor gene p13.3 117580 ChimerSeq ChiTaRs ChiTaRs UBAP1-UBAP1 UBAP1 chr9 34252521 UBAP1 chr9 34252094 Exonic hg19 NA CA314663 5'UTR-CDS Intra-chr p13.3 p13.3 117581 ChimerSeq ChiTaRs ChiTaRs SOX4-SOX4 SOX4 chr6 21595876 SOX4 chr6 21594747 Exonic hg19 NA AI817673 Out-of-frame Intra-chr p22.3 Transcription factor p22.3 Transcription factor 117582 ChimerSeq ChiTaRs ChiTaRs NMUR1-FZR1 NMUR1 chr2 232392107 FZR1 chr19 3535141 Exonic hg19 NA BG989333 Out-of-frame Inter-chr q37.1 p13.3 Oncogene Tumor suppressor gene 117583 ChimerSeq ChiTaRs ChiTaRs ADD1-CAST ADD1 chr4 2900975 CAST chr5 96084251 Exonic hg19 NA BE000093 Out-of-frame Inter-chr p16.3 q15 117584 ChimerSeq ChiTaRs ChiTaRs SDCCAG8-DNAJC5 SDCCAG8 chr1 243549017 DNAJC5 chr20 62538169 Exonic hg19 NA AW855153 Out-of-frame Inter-chr q13.33 117585 ChimerSeq ChiTaRs ChiTaRs HS2ST1-RUNX2 HS2ST1 chr1 87381811 RUNX2 chr6 45421434 Exonic hg19 NA BF917753 Out-of-frame Inter-chr p22.3 p21.1 Tumor suppressor gene Transcription factor 117586 ChimerSeq ChiTaRs ChiTaRs DST-SDF4 DST chr6 56499627 SDF4 chr1 1154185 Exonic hg19 NA BE315243 Out-of-frame Inter-chr p12.1 Oncogene p36.33 117587 ChimerSeq ChiTaRs ChiTaRs RUNX1T1-TRIQK RUNX1T1 chr8 93107640 TRIQK chr8 93898913 Exonic hg19 NA DA102333 Out-of-frame Intra-chr q21.3 Oncogene q22.1 117588 ChimerSeq ChiTaRs ChiTaRs HNRNPH1-ZNF234 HNRNPH1 chr5 179048349 ZNF234 chr19 44645929 Exonic hg19 NA BI036303 Out-of-frame Inter-chr q35.3 q13.31 Transcription factor 117589 ChimerSeq ChiTaRs ChiTaRs HLA-DPA1-HLA-DPA1 HLA-DPA1 chr6 4521930 HLA-DPA1 chr6 4521752 Exonic hg19 NA BE708723 Out-of-frame Intra-chr 117590 ChimerSeq ChiTaRs ChiTaRs HMGCL-VPS37B HMGCL chr1 24128704 VPS37B chr12 123379777 Exonic hg19 NA AI202943 Out-of-frame Inter-chr p36.11 q24.31 117591 ChimerSeq ChiTaRs ChiTaRs IRAK1BP1-IRAK1BP1 IRAK1BP1 chr6 79645723 IRAK1BP1 chr6 79645584 Exonic hg19 NA BG290903 Out-of-frame Intra-chr q14.1 q14.1 117592 ChimerSeq ChiTaRs ChiTaRs PRKCD-PRKCD PRKCD chr3 53226919 PRKCD chr3 53226391 Exonic hg19 NA AK130023 Out-of-frame Intra-chr p21.1 Tumor suppressor gene p21.1 Tumor suppressor gene 117593 ChimerSeq ChiTaRs ChiTaRs TG-TNRC6A TG chr8 134026049 TNRC6A chr16 24831244 Exonic hg19 NA BF839733 Out-of-frame Inter-chr q24.22 p12.1 117594 ChimerSeq ChiTaRs ChiTaRs EMILIN1-ARG2 EMILIN1 chr2 27309271 ARG2 chr14 68116886 Exonic hg19 NA AI656563 Out-of-frame Inter-chr p23.3 q24.1 117595 ChimerSeq ChiTaRs ChiTaRs LOC100505806-RAD21 LOC100505806 chr5 9549029 RAD21 chr8 117874144 Exonic hg19 NA DA775853 Out-of-frame Inter-chr q24.11 117596 ChimerSeq ChiTaRs ChiTaRs DARS-C14orf132 DARS chr2 136715704 C14orf132 chr14 96558379 Exonic hg19 NA M85783 Out-of-frame Inter-chr q21.3 q32.2 117597 ChimerSeq ChiTaRs ChiTaRs GMPPB-GMPPB GMPPB chr3 49760121 GMPPB chr3 49759143 Exonic hg19 NA BF750903 Out-of-frame Intra-chr p21.31 p21.31 117598 ChimerSeq ChiTaRs ChiTaRs NUCKS1-NUCKS1 NUCKS1 chr1 205686190 NUCKS1 chr1 205686673 Exonic hg19 NA BF309673 Out-of-frame Intra-chr q32.1 q32.1 117599 ChimerSeq ChiTaRs ChiTaRs UAP1L1-PLG UAP1L1 chr9 139978989 PLG chr6 161138609 Exonic hg19 NA AW301153 Out-of-frame Inter-chr q34.3 q26 117600 ChimerSeq ChiTaRs ChiTaRs RPS6-NDST3 RPS6 chr9 19376507 NDST3 chr4 118999891 Exonic hg19 NA AV697913 Out-of-frame Inter-chr p22.1 q26 117601 ChimerSeq ChiTaRs ChiTaRs FAM50A-RPL5 FAM50A chrX 153674204 RPL5 chr1 93297594 Exonic hg19 NA EL584993 Out-of-frame Inter-chr q28 p22.1 Tumor suppressor gene 117602 ChimerSeq ChiTaRs ChiTaRs SLC25A25-LYPLAL1 SLC25A25 chr9 130831964 LYPLAL1 chr1 219378705 Exonic hg19 NA AW854013 Out-of-frame Inter-chr q34.11 q41 117603 ChimerSeq ChiTaRs ChiTaRs ZFAND3-SLC25A37 ZFAND3 chr6 37960485 SLC25A37 chr8 23427936 Exonic hg19 NA AF116693 Out-of-frame Inter-chr p21.2 p21.2 117604 ChimerSeq ChiTaRs ChiTaRs ART3-GLUL ART3 chr4 76942352 GLUL chr1 182352031 Exonic hg19 NA AW168573 Out-of-frame Inter-chr q21.1 q25.3 117605 ChimerSeq ChiTaRs ChiTaRs YAE1D1-ZNF208 YAE1D1 chr7 39610173 ZNF208 chr19 22153557 Exonic hg19 NA BF773243 Out-of-frame Inter-chr p14.1 p12 Transcription factor 117606 ChimerSeq ChiTaRs ChiTaRs FAM13A-IGF1R FAM13A chr4 89698566 IGF1R chr15 99276714 Exonic hg19 NA BF854623 Out-of-frame Inter-chr q22.1 q26.3 TK:InsR Oncogene 117607 ChimerSeq ChiTaRs ChiTaRs MTPN-MTPN MTPN chr7 135611719 MTPN chr7 135611858 Exonic hg19 NA BU608013 Out-of-frame Intra-chr q33 q33 117608 ChimerSeq ChiTaRs ChiTaRs GRK5-GRK5 GRK5 chr10 121116035 GRK5 chr10 121116100 Exonic hg19 NA BI037433 Out-of-frame Intra-chr q26.11 q26.11 117609 ChimerSeq ChiTaRs ChiTaRs SLC25A51-KCNJ6 SLC25A51 chr9 37883886 KCNJ6 chr21 38996786 Exonic hg19 NA U52153 Out-of-frame Inter-chr p13.1 q22.13 117610 ChimerSeq ChiTaRs ChiTaRs GLO1-GLO1 GLO1 chr6 38644891 GLO1 chr6 38644168 Exonic hg19 NA BU507823 Out-of-frame Intra-chr p21.2 p21.2 117611 ChimerSeq ChiTaRs ChiTaRs SNRNP70-GALT SNRNP70 chr19 49611448 GALT chr9 34648372 Exonic hg19 NA CV351576 Out-of-frame Inter-chr q13.33 p13.3 117612 ChimerSeq ChiTaRs ChiTaRs ARL16-LPIN1 ARL16 chr17 79650824 LPIN1 chr2 11905658 Exonic hg19 NA DA403287 CDS-5'UTR Inter-chr q25.3 p25.1 117613 ChimerSeq ChiTaRs ChiTaRs PLD6-TNS1 PLD6 chr17 17109632 TNS1 chr2 218677091 Exonic hg19 NA BF732578 Out-of-frame Inter-chr p11.2 q35 117614 ChimerSeq ChiTaRs ChiTaRs VPS4A-VPS4A VPS4A chr16 69354185 VPS4A chr16 69353425 Exonic hg19 NA BQ334182 Out-of-frame Intra-chr q22.1 q22.1 117615 ChimerSeq ChiTaRs ChiTaRs PMM2-FDPS PMM2 chr16 8906963 FDPS chr1 155287732 Exonic hg19 NA BG491331 In-Frame Inter-chr p13.2 q22 117616 ChimerSeq ChiTaRs ChiTaRs MEG3-PPM1G MEG3 chr14 101301803 PPM1G chr2 27604463 Exonic hg19 NA BG015191 Out-of-frame Inter-chr q32.2 Tumor suppressor gene p23.3 117617 ChimerSeq ChiTaRs ChiTaRs SERPINA3-SERPINA3 SERPINA3 chr14 95090184 SERPINA3 chr14 95090209 Exonic hg19 NA BE813446 Out-of-frame Intra-chr q32.13 q32.13 117618 ChimerSeq ChiTaRs ChiTaRs MLL2-HLA-DPA1 MLL2 chr12 49445903 HLA-DPA1 chr6 4517371 Exonic hg19 NA BF931405 Out-of-frame Inter-chr 117619 ChimerSeq ChiTaRs ChiTaRs CTNNBL1-CTNNBL1 CTNNBL1 chr20 36361332 CTNNBL1 chr20 36488413 Exonic hg19 NA AI694582 Out-of-frame Intra-chr q11.23 q11.23 117620 ChimerSeq ChiTaRs ChiTaRs SNAP29-SNAP29 SNAP29 chr22 21224741 SNAP29 chr22 21235394 Exonic hg19 NA AW391811 Out-of-frame Intra-chr q11.21 q11.21 117621 ChimerSeq ChiTaRs ChiTaRs TAGLN-BCORL1 TAGLN chr11 117075498 BCORL1 chrX 129147106 Exonic hg19 NA AI087196 Out-of-frame Inter-chr q23.3 Tumor suppressor gene q26.1 Tumor suppressor gene 117622 ChimerSeq ChiTaRs ChiTaRs SNRPN-LENG8 SNRPN chr15 25425043 LENG8 chr19 54972631 Exonic hg19 NA BI034781 Out-of-frame Inter-chr q11.2 117623 ChimerSeq ChiTaRs ChiTaRs ANKRD11-GOLGB1 ANKRD11 chr16 89347938 GOLGB1 chr3 121395740 Exonic hg19 NA BF822728 Out-of-frame Inter-chr q24.3 q13.33 117624 ChimerSeq ChiTaRs ChiTaRs EEF2-EEF2 EEF2 chr19 3980548 EEF2 chr19 3984223 Exonic hg19 NA BQ349979 Out-of-frame Intra-chr p13.3 p13.3 117625 ChimerSeq ChiTaRs ChiTaRs ARFGAP1-ARFGAP1 ARFGAP1 chr20 61921078 ARFGAP1 chr20 61919533 Exonic hg19 NA BF435836 Out-of-frame Intra-chr q13.33 q13.33 117626 ChimerSeq ChiTaRs ChiTaRs GGA2-RPF1 GGA2 chr16 23521735 RPF1 chr1 84956001 Exonic hg19 NA AA255952 5'UTR-CDS Inter-chr p12.2 p22.3 Tumor suppressor gene 117627 ChimerSeq ChiTaRs ChiTaRs RAB8A-AIM1 RAB8A chr19 16240395 AIM1 chr6 106967227 Exonic hg19 NA BI029234 Out-of-frame Inter-chr p13.11 117628 ChimerSeq ChiTaRs ChiTaRs SYNJ1-SYNJ1 SYNJ1 chr21 34029070 SYNJ1 chr21 34099167 Exonic hg19 NA BP366199 Out-of-frame Intra-chr q22.11 q22.11 117629 ChimerSeq ChiTaRs ChiTaRs MALAT1-SETDB1 MALAT1 chr11 65268061 SETDB1 chr1 150898948 Exonic hg19 NA BF992583 Out-of-frame Inter-chr q13.1 q21.3 Transcription factor 117630 ChimerSeq ChiTaRs ChiTaRs AP1G2-HLA-F AP1G2 chr14 24030630 HLA-F chr6 1029924 Exonic hg19 NA BF917628 Out-of-frame Inter-chr q11.2 117631 ChimerSeq ChiTaRs ChiTaRs TAGLN-TAGLN TAGLN chr11 117075240 TAGLN chr11 117073841 Exonic hg19 NA BG953256 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene 117632 ChimerSeq ChiTaRs ChiTaRs CRTC1-EWSR1 CRTC1 chr19 18880481 EWSR1 chr22 29695762 Exonic hg19 NA AW803220 Out-of-frame Inter-chr p13.11 Oncogene q12.2 117633 ChimerSeq ChiTaRs ChiTaRs GNAS-FHIT GNAS chr20 57484792 FHIT chr3 59784430 Exonic hg19 NA BP430864 Out-of-frame Inter-chr q13.32 Oncogene p14.2 Tumor suppressor gene 117634 ChimerSeq ChiTaRs ChiTaRs PPP6R3-DPP3 PPP6R3 chr11 68228297 DPP3 chr11 66272080 Exonic hg19 NA DC369559 Out-of-frame Intra-chr q13.2 q13.2 117635 ChimerSeq ChiTaRs ChiTaRs KCTD5-SPTBN2 KCTD5 chr16 2758907 SPTBN2 chr11 66455482 Exonic hg19 NA BU739358 Out-of-frame Inter-chr p13.3 q13.2 117636 ChimerSeq ChiTaRs ChiTaRs SRRM2-SRRM2 SRRM2 chr16 2821035 SRRM2 chr16 2819030 Exonic hg19 NA BF876344 Out-of-frame Intra-chr p13.3 p13.3 117637 ChimerSeq ChiTaRs ChiTaRs ZFP36L1-SMG6 ZFP36L1 chr14 69261956 SMG6 chr17 1968369 Exonic hg19 NA DA746032 Out-of-frame Inter-chr q24.1 p13.3 117638 ChimerSeq ChiTaRs ChiTaRs MYADM-SPIDR MYADM chr19 54377456 SPIDR chr8 48511665 Exonic hg19 NA BI021868 Out-of-frame Inter-chr q13.42 q11.21 117639 ChimerSeq ChiTaRs ChiTaRs SLC25A3-SLC12A7 SLC25A3 chr12 98989559 SLC12A7 chr5 1050689 Exonic hg19 NA BP431116 Out-of-frame Inter-chr q23.1 p15.33 117640 ChimerSeq ChiTaRs ChiTaRs MLL-MLL MLL chr11 118353215 MLL chr11 118339488 Exonic hg19 NA AY187942 Out-of-frame Intra-chr q23.3 q23.3 117641 ChimerSeq ChiTaRs ChiTaRs CADM1-COL1A2 CADM1 chr11 115044413 COL1A2 chr7 94033883 Exonic hg19 NA BU625674 Out-of-frame Inter-chr q23.3 Tumor suppressor gene q21.3 117642 ChimerSeq ChiTaRs ChiTaRs RPSAP52-ELAC2 RPSAP52 chr12 66221868 ELAC2 chr17 12899020 Exonic hg19 NA BX283235 Out-of-frame Inter-chr q14.3 p12 117643 ChimerSeq ChiTaRs ChiTaRs FKBP4-EIF5A FKBP4 chr12 2904351 EIF5A chr17 7211044 Exonic hg19 NA CN372949 Out-of-frame Inter-chr p13.33 p13.1 117644 ChimerSeq ChiTaRs ChiTaRs TRIM29-SDC1 TRIM29 chr11 119991324 SDC1 chr2 20403811 Exonic hg19 NA BI055855 Out-of-frame Inter-chr q23.3 p24.1 117645 ChimerSeq ChiTaRs ChiTaRs OAZ1-FKBP8 OAZ1 chr19 2269744 FKBP8 chr19 18652488 Exonic hg19 NA CB153060 Out-of-frame Intra-chr p13.3 p13.11 117646 ChimerSeq ChiTaRs ChiTaRs BOLA2-BOLA2 BOLA2 chr16 30081544 BOLA2 chr16 30081308 Exonic hg19 NA BQ292082 Out-of-frame Intra-chr p11.2 p11.2 117647 ChimerSeq ChiTaRs ChiTaRs EEF2-EEF2 EEF2 chr19 3977992 EEF2 chr19 3981942 Exonic hg19 NA BE173877 Out-of-frame Intra-chr p13.3 p13.3 117648 ChimerSeq ChiTaRs ChiTaRs NCOA3-SLAIN1 NCOA3 chr20 46130765 SLAIN1 chr13 78293665 Exonic hg19 NA DA523336 Out-of-frame Inter-chr q13.12 Transcription factor q22.3 117649 ChimerSeq ChiTaRs ChiTaRs SF3B2-PRCC SF3B2 chr11 65827281 PRCC chr1 156756641 Exonic hg19 NA BE089928 Out-of-frame Inter-chr q13.1 q23.1 117650 ChimerSeq ChiTaRs ChiTaRs ACAA2-SMG1 ACAA2 chr18 47317942 SMG1 chr16 18845615 Exonic hg19 NA BE842124 Out-of-frame Inter-chr q21.1 p12.3 Atypical:PIKK 117651 ChimerSeq ChiTaRs ChiTaRs FLII-SPATA20 FLII chr17 18148734 SPATA20 chr17 48632606 Exonic hg19 NA BE075823 Out-of-frame Intra-chr q21.33 117652 ChimerSeq ChiTaRs ChiTaRs JUP-JUP JUP chr17 39921203 JUP chr17 39921234 Exonic hg19 NA AA632538 Out-of-frame Intra-chr q21.2 Tumor suppressor gene q21.2 Tumor suppressor gene 117653 ChimerSeq ChiTaRs ChiTaRs RILPL1-PMPCA RILPL1 chr12 124008060 PMPCA chr9 139317869 Exonic hg19 NA BF742243 Out-of-frame Inter-chr q24.31 q34.3 117654 ChimerSeq ChiTaRs ChiTaRs MYLPF-TCF4 MYLPF chr16 30389191 TCF4 chr18 52895451 Exonic hg19 NA BM873773 CDS-3'UTR Inter-chr p11.2 q21.2 Tumor suppressor gene Transcription factor 117655 ChimerSeq ChiTaRs ChiTaRs UPF3A-JAKMIP3 UPF3A chr13 115061034 JAKMIP3 chr10 133958643 Exonic hg19 NA BF925130 Out-of-frame Inter-chr q34 q26.3 117656 ChimerSeq ChiTaRs ChiTaRs JUP-DDX41 JUP chr17 39914747 DDX41 chr5 176938813 Exonic hg19 NA BE075620 Out-of-frame Inter-chr q21.2 Tumor suppressor gene q35.3 117657 ChimerSeq ChiTaRs ChiTaRs CBFB-NDE1 CBFB chr16 67116211 NDE1 chr16 15818744 Exonic hg19 NA AF249897 CDS-3'UTR Intra-chr q22.1 p13.11 117658 ChimerSeq ChiTaRs ChiTaRs GABPB1-PPP1R15B GABPB1 chr15 50613536 PPP1R15B chr1 204379566 Exonic hg19 NA BG004010 Out-of-frame Inter-chr q21.2 q32.1 117659 ChimerSeq ChiTaRs ChiTaRs APP-APP APP chr21 27394337 APP chr21 27253965 Exonic hg19 NA BE142898 Out-of-frame Intra-chr q21.3 q21.3 117660 ChimerSeq ChiTaRs ChiTaRs IL32-PUS1 IL32 chr16 3132568 PUS1 chr12 132413882 Exonic hg19 NA AI656034 Out-of-frame Inter-chr p13.3 q24.33 117661 ChimerSeq ChiTaRs ChiTaRs ZACN-ALG3 ZACN chr17 74078054 ALG3 chr3 183960723 Exonic hg19 NA BF916293 Out-of-frame Inter-chr q25.1 q27.1 117662 ChimerSeq ChiTaRs ChiTaRs UBA52-TM4SF1 UBA52 chr19 18684552 TM4SF1 chr3 149093262 Exonic hg19 NA BE070452 Out-of-frame Inter-chr p13.11 q25.1 117663 ChimerSeq ChiTaRs ChiTaRs SELO-ECE1 SELO chr22 50655686 ECE1 chr1 21546403 Exonic hg19 NA BF932164 Out-of-frame Inter-chr p36.12 117664 ChimerSeq ChiTaRs ChiTaRs ZNF609-ZNF609 ZNF609 chr15 64967246 ZNF609 chr15 64967401 Exonic hg19 NA AI992209 Out-of-frame Intra-chr q22.31 Transcription factor q22.31 Transcription factor 117665 ChimerSeq ChiTaRs ChiTaRs TBCD-AKR1B1 TBCD chr17 80790191 AKR1B1 chr7 134134452 Exonic hg19 NA BG009392 Out-of-frame Inter-chr q33 Tumor suppressor gene 117666 ChimerSeq ChiTaRs ChiTaRs CIRBP-AS1-ITPK1 CIRBP-AS1 chr19 1440492 ITPK1 chr14 93428951 Exonic hg19 NA AI052363 Out-of-frame Inter-chr p13.3 Tumor suppressor gene 117667 ChimerSeq ChiTaRs ChiTaRs HIRA-HSD11B2 HIRA chr22 19389815 HSD11B2 chr16 67469639 Exonic hg19 NA BM796617 Out-of-frame Inter-chr q11.21 Tumor suppressor gene q22.1 117668 ChimerSeq ChiTaRs ChiTaRs PMEPA1-PMEPA1 PMEPA1 chr20 56228142 PMEPA1 chr20 56284530 Exonic hg19 NA AA249792 In-Frame Intra-chr q13.31 q13.31 117669 ChimerSeq ChiTaRs ChiTaRs RBM14-RBM14 RBM14 chr11 66393099 RBM14 chr11 66392305 Exonic hg19 NA AI732744 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 Tumor suppressor gene 117670 ChimerSeq ChiTaRs ChiTaRs SART3-SART3 SART3 chr12 108920057 SART3 chr12 108920048 Exonic hg19 NA BE932290 Out-of-frame Intra-chr q23.3 q23.3 117671 ChimerSeq ChiTaRs ChiTaRs MLL2-HLA-DPA1 MLL2 chr12 49445964 HLA-DPA1 chr6 4517371 Exonic hg19 NA BF931318 Out-of-frame Inter-chr 117672 ChimerSeq ChiTaRs ChiTaRs MYH9-PML MYH9 chr22 36697684 PML chr15 74312713 Exonic hg19 NA AW838641 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene q24.1 Oncogene Tumor suppressor gene 117673 ChimerSeq ChiTaRs ChiTaRs SRRM2-SRRM2 SRRM2 chr16 2808519 SRRM2 chr16 2815294 Exonic hg19 NA BF592846 Out-of-frame Intra-chr p13.3 p13.3 117674 ChimerSeq ChiTaRs ChiTaRs SH2B3-TRIOBP SH2B3 chr12 111888843 TRIOBP chr22 38120499 Exonic hg19 NA BQ330487 Out-of-frame Inter-chr q24.12 Tumor suppressor gene q13.1 117675 ChimerSeq ChiTaRs ChiTaRs C17orf49-OPA3 C17orf49 chr17 6920836 OPA3 chr19 46055317 Exonic hg19 NA BM874265 Out-of-frame Inter-chr p13.1 q13.32 117676 ChimerSeq ChiTaRs ChiTaRs C19orf6-C19orf6 C19orf6 chr19 1014471 C19orf6 chr19 1010082 Exonic hg19 NA AI082342 Out-of-frame Intra-chr 117677 ChimerSeq ChiTaRs ChiTaRs SKA2-GNAS SKA2 chr17 57232536 GNAS chr20 57470666 Exonic hg19 NA BU783722 5'UTR-5'UTR Inter-chr q22 q13.32 Oncogene 117678 ChimerSeq ChiTaRs ChiTaRs FOSL1-GIT1 FOSL1 chr11 65667890 GIT1 chr17 27900702 Exonic hg19 NA CB113150 Out-of-frame Inter-chr q13.1 Transcription factor q11.2 117679 ChimerSeq ChiTaRs ChiTaRs GRN-GRN GRN chr17 42427641 GRN chr17 42427832 Exonic hg19 NA AW848872 Out-of-frame Intra-chr q21.31 q21.31 117680 ChimerSeq ChiTaRs ChiTaRs UCP2-UCP2 UCP2 chr11 73687978 UCP2 chr11 73686032 Exonic hg19 NA BE707055 Out-of-frame Intra-chr q13.4 q13.4 117681 ChimerSeq ChiTaRs ChiTaRs HDAC5-HDAC5 HDAC5 chr17 42158227 HDAC5 chr17 42160160 Exonic hg19 NA BE844021 Out-of-frame Intra-chr q21.31 q21.31 117682 ChimerSeq ChiTaRs ChiTaRs YIPF2-HLA-H YIPF2 chr19 11033754 HLA-H chr6 29855956 Exonic hg19 NA AA527504 Out-of-frame Inter-chr p13.2 117683 ChimerSeq ChiTaRs ChiTaRs TUBG1-TUBG1 TUBG1 chr17 40767080 TUBG1 chr17 40767093 Exonic hg19 NA CN275550 Out-of-frame Intra-chr q21.2 q21.2 117684 ChimerSeq ChiTaRs ChiTaRs LRP5-LRP5 LRP5 chr11 68197134 LRP5 chr11 68197148 Exonic hg19 NA BG178813 Out-of-frame Intra-chr q13.2 q13.2 117685 ChimerSeq ChiTaRs ChiTaRs IGF1R-IGF1R IGF1R chr15 99200029 IGF1R chr15 99199116 Exonic hg19 NA BE159611 Out-of-frame Intra-chr q26.3 TK:InsR Oncogene q26.3 TK:InsR Oncogene 117686 ChimerSeq ChiTaRs ChiTaRs C21orf2-PDXK C21orf2 chr21 45749570 PDXK chr21 45157177 Exonic hg19 NA L25496 Out-of-frame Intra-chr q22.3 q22.3 117687 ChimerSeq ChiTaRs ChiTaRs MLL-ACTN4 MLL chr11 118353210 ACTN4 chr19 39191238 Exonic hg19 NA FM165195 Out-of-frame Inter-chr q23.3 117688 ChimerSeq ChiTaRs ChiTaRs HIRA-HIRA HIRA chr22 19385821 HIRA chr22 19385826 Exonic hg19 NA BF358759 Out-of-frame Intra-chr q11.21 Tumor suppressor gene q11.21 Tumor suppressor gene 117689 ChimerSeq ChiTaRs ChiTaRs RYR1-RYR1 RYR1 chr19 38958299 RYR1 chr19 38959671 Exonic hg19 NA AI651620 Out-of-frame Intra-chr q13.2 q13.2 117690 ChimerSeq ChiTaRs ChiTaRs GRN-HIPK1 GRN chr17 42429169 HIPK1 chr1 114518323 Exonic hg19 NA AW841772 Out-of-frame Inter-chr q21.31 p13.2 CMGC:DYRK 117691 ChimerSeq ChiTaRs ChiTaRs GRN-HIPK1 GRN chr17 42429160 HIPK1 chr1 114518323 Exonic hg19 NA AW841754 Out-of-frame Inter-chr q21.31 p13.2 CMGC:DYRK 117692 ChimerSeq ChiTaRs ChiTaRs NMT1-NMT1 NMT1 chr17 43182289 NMT1 chr17 43180377 Exonic hg19 NA BE930577 Out-of-frame Intra-chr q21.31 q21.31 117693 ChimerSeq ChiTaRs ChiTaRs DHRS12-LYAR DHRS12 chr13 52358796 LYAR chr4 4283592 Exonic hg19 NA BF800135 Out-of-frame Inter-chr q14.3 p16.3 117694 ChimerSeq ChiTaRs ChiTaRs RUNX1-FBXW7 RUNX1 chr21 36220044 FBXW7 chr4 153332704 Exonic hg19 NA DQ177302 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q31.3 Oncogene Tumor suppressor gene 117695 ChimerSeq ChiTaRs ChiTaRs HGS-HGS HGS chr17 79660548 HGS chr17 79657714 Exonic hg19 NA BF155256 Out-of-frame Intra-chr q25.3 q25.3 117696 ChimerSeq ChiTaRs ChiTaRs NCOA5-COPZ1 NCOA5 chr20 44692009 COPZ1 chr12 54745196 Exonic hg19 NA BE171249 Out-of-frame Inter-chr q13.12 Tumor suppressor gene q13.13 117697 ChimerSeq ChiTaRs ChiTaRs VAT1-MPST VAT1 chr17 41166687 MPST chr22 37425736 Exonic hg19 NA BF516432 Out-of-frame Inter-chr q21.31 q12.3 117698 ChimerSeq ChiTaRs ChiTaRs AKAP8L-ADAMTS2 AKAP8L chr19 15491393 ADAMTS2 chr5 178662328 Exonic hg19 NA BE551916 Out-of-frame Inter-chr p13.12 Transcription factor 117699 ChimerSeq ChiTaRs ChiTaRs CCDC137-CCDC137 CCDC137 chr17 79637468 CCDC137 chr17 79639653 Exonic hg19 NA AI917713 Out-of-frame Intra-chr q25.3 q25.3 117700 ChimerSeq ChiTaRs ChiTaRs RAD23A-H19 RAD23A chr19 13059047 H19 chr11 2018390 Exonic hg19 NA BP320500 Out-of-frame Inter-chr p13.13 p15.5 Tumor suppressor gene 117701 ChimerSeq ChiTaRs ChiTaRs MIR5095-MIR5095 MIR5095 chr20 55953511 MIR5095 chr20 55953262 Exonic hg19 NA CA450554 Out-of-frame Intra-chr p32.3 p32.3 117702 ChimerSeq ChiTaRs ChiTaRs DNAJC3-DNAJC3 DNAJC3 chr13 96445339 DNAJC3 chr13 96445433 Exonic hg19 NA AA533636 Out-of-frame Intra-chr q32.1 q32.1 117703 ChimerSeq ChiTaRs ChiTaRs KSR2-SETD1A KSR2 chr12 118108741 SETD1A chr16 30987788 Exonic hg19 NA BI000419 Out-of-frame Inter-chr q24.23 TKL:RAF p11.2 117704 ChimerSeq ChiTaRs ChiTaRs MLL-MLL MLL chr11 118359411 MLL chr11 118352599 Exonic hg19 NA AF272371 Out-of-frame Intra-chr q23.3 q23.3 117705 ChimerSeq ChiTaRs ChiTaRs ATP6V0D1-ATP6V0D1 ATP6V0D1 chr16 67472962 ATP6V0D1 chr16 67472926 Exonic hg19 NA BE693983 Out-of-frame Intra-chr q22.1 q22.1 117706 ChimerSeq ChiTaRs ChiTaRs SCN4A-SCN4A SCN4A chr17 62043501 SCN4A chr17 62049736 Exonic hg19 NA CD608177 Out-of-frame Intra-chr q23.3 q23.3 117707 ChimerSeq ChiTaRs ChiTaRs SCAMP4-C7orf26 SCAMP4 chr19 1924971 C7orf26 chr7 6647763 Exonic hg19 NA CB067790 Out-of-frame Inter-chr p13.3 p22.1 117708 ChimerSeq ChiTaRs ChiTaRs PPP6R1-ZGLP1 PPP6R1 chr19 55769840 ZGLP1 chr19 10415827 Exonic hg19 NA BM771193 Out-of-frame Intra-chr q13.42 p13.2 Transcription factor 117709 ChimerSeq ChiTaRs ChiTaRs AES-MPHOSPH10 AES chr19 3053264 MPHOSPH10 chr2 71362676 Exonic hg19 NA BE835127 Out-of-frame Inter-chr p13.3 p13.3 117710 ChimerSeq ChiTaRs ChiTaRs PPP6R2-INTS3 PPP6R2 chr22 50881730 INTS3 chr1 153735830 Exonic hg19 NA BE719316 Out-of-frame Inter-chr q13.33 q21.3 117711 ChimerSeq ChiTaRs ChiTaRs GRB2-GRB2 GRB2 chr17 73316469 GRB2 chr17 73316451 Exonic hg19 NA AI940563 Out-of-frame Intra-chr q25.1 q25.1 117712 ChimerSeq ChiTaRs ChiTaRs IRX3-MYH9 IRX3 chr16 54318947 MYH9 chr22 36684328 Exonic hg19 NA BE762631 Out-of-frame Inter-chr q12.2 Transcription factor q12.3 Oncogene Tumor suppressor gene 117713 ChimerSeq ChiTaRs ChiTaRs CREBBP-CREB3L2 CREBBP chr16 3786109 CREB3L2 chr7 137584036 Exonic hg19 NA BI000845 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene q33 Transcription factor 117714 ChimerSeq ChiTaRs ChiTaRs NEMF-NEMF NEMF chr14 50269256 NEMF chr14 50280713 Exonic hg19 NA BG878308 Out-of-frame Intra-chr q21.3 q21.3 117715 ChimerSeq ChiTaRs ChiTaRs MED16-MED16 MED16 chr19 879999 MED16 chr19 884903 Exonic hg19 NA BM919198 Out-of-frame Intra-chr p13.3 p13.3 117716 ChimerSeq ChiTaRs ChiTaRs CTSZ-TENC1 CTSZ chr20 57571857 TENC1 chr12 53451386 Exonic hg19 NA AW818437 Out-of-frame Inter-chr q13.32 117717 ChimerSeq ChiTaRs ChiTaRs BAZ2A-BAZ2A BAZ2A chr12 57003658 BAZ2A chr12 57000040 Exonic hg19 NA BQ352905 Out-of-frame Intra-chr q13.3 Transcription factor q13.3 Transcription factor 117718 ChimerSeq ChiTaRs ChiTaRs SAP30BP-SAP30BP SAP30BP chr17 73698599 SAP30BP chr17 73667898 Exonic hg19 NA BE175395 Out-of-frame Intra-chr q25.1 q25.1 117719 ChimerSeq ChiTaRs ChiTaRs MALAT1-GNA12 MALAT1 chr11 65268458 GNA12 chr7 2770715 Exonic hg19 NA AW820236 Out-of-frame Inter-chr q13.1 p22.2 117720 ChimerSeq ChiTaRs ChiTaRs SHANK3-PLEKHA6 SHANK3 chr22 51144704 PLEKHA6 chr1 204255154 Exonic hg19 NA BF947670 Out-of-frame Inter-chr q32.1 117721 ChimerSeq ChiTaRs ChiTaRs TBC1D24-CHD4 TBC1D24 chr16 2569311 CHD4 chr12 6709386 Exonic hg19 NA CN277824 Out-of-frame Inter-chr p13.3 p13.31 117722 ChimerSeq ChiTaRs ChiTaRs ZFAND6-PSMB1 ZFAND6 chr15 80352151 PSMB1 chr6 170844443 Exonic hg19 NA CB122525 5'UTR-CDS Inter-chr q25.1 117723 ChimerSeq ChiTaRs ChiTaRs MEG3-MEG3 MEG3 chr14 101302360 MEG3 chr14 101295389 Exonic hg19 NA DA865025 Out-of-frame Intra-chr q32.2 Tumor suppressor gene q32.2 Tumor suppressor gene 117724 ChimerSeq ChiTaRs ChiTaRs HYOU1-HYOU1 HYOU1 chr11 118923063 HYOU1 chr11 118923064 Exonic hg19 NA BF326355 Out-of-frame Intra-chr 117725 ChimerSeq ChiTaRs ChiTaRs LTBP3-RAP1GAP2 LTBP3 chr11 65306477 RAP1GAP2 chr17 2940172 Exonic hg19 NA AI031629 Out-of-frame Inter-chr q13.1 p13.3 117726 ChimerSeq ChiTaRs ChiTaRs PRSS8-S100A14 PRSS8 chr16 31142850 S100A14 chr1 153587202 Exonic hg19 NA AI637635 Out-of-frame Inter-chr p11.2 q21.3 117727 ChimerSeq ChiTaRs ChiTaRs USP10-NUP93 USP10 chr16 84733718 NUP93 chr16 56832386 Exonic hg19 NA CN307206 Out-of-frame Intra-chr q24.1 q13 117728 ChimerSeq ChiTaRs ChiTaRs MED15-MED15 MED15 chr22 20939565 MED15 chr22 20939403 Exonic hg19 NA BI051034 Out-of-frame Intra-chr q11.21 q11.21 117729 ChimerSeq ChiTaRs ChiTaRs CD248-PPP1R7 CD248 chr11 66083370 PPP1R7 chr2 242092890 Exonic hg19 NA BI046018 Out-of-frame Inter-chr q13.2 q37.3 117730 ChimerSeq ChiTaRs ChiTaRs MFGE8-MFGE8 MFGE8 chr15 89442704 MFGE8 chr15 89442887 Exonic hg19 NA AI086567 Out-of-frame Intra-chr q26.1 q26.1 117731 ChimerSeq ChiTaRs ChiTaRs NDRG2-RPL38 NDRG2 chr14 21488735 RPL38 chr17 72200288 Exonic hg19 NA CK004088 Out-of-frame Inter-chr q11.2 Tumor suppressor gene q25.1 117732 ChimerSeq ChiTaRs ChiTaRs XRN2-EEF1D XRN2 chr20 21312271 EEF1D chr8 144674315 Exonic hg19 NA BG004570 CDS-5'UTR Inter-chr p11.22 117733 ChimerSeq ChiTaRs ChiTaRs LRP1-LRP1 LRP1 chr12 57605369 LRP1 chr12 57603806 Exonic hg19 NA AW366981 Out-of-frame Intra-chr q13.3 q13.3 117734 ChimerSeq ChiTaRs ChiTaRs CD3D-MRPS5 CD3D chr11 118212679 MRPS5 chr2 95756671 Exonic hg19 NA BF873231 Out-of-frame Inter-chr q23.3 q11.1 117735 ChimerSeq ChiTaRs ChiTaRs MYO1E-MYO1E MYO1E chr15 59497669 MYO1E chr15 59500877 Exonic hg19 NA BE767923 Out-of-frame Intra-chr q22.2 q22.2 117736 ChimerSeq ChiTaRs ChiTaRs KLHL22-KLHL22 KLHL22 chr22 20819180 KLHL22 chr22 20819350 Exonic hg19 NA AI768797 Out-of-frame Intra-chr q11.21 q11.21 117737 ChimerSeq ChiTaRs ChiTaRs CTTN-MYO5A CTTN chr11 70255640 MYO5A chr15 52603240 Exonic hg19 NA BF946617 Out-of-frame Inter-chr q13.3 q21.2 117738 ChimerSeq ChiTaRs ChiTaRs MCM5-MCM5 MCM5 chr22 35819247 MCM5 chr22 35819246 Exonic hg19 NA BF929196 Out-of-frame Intra-chr q12.3 q12.3 117739 ChimerSeq ChiTaRs ChiTaRs STT3A-CKB STT3A chr11 125488374 CKB chr14 103986331 Exonic hg19 NA EC545946 Out-of-frame Inter-chr q24.2 q32.33 117740 ChimerSeq ChiTaRs ChiTaRs ACTN4-MZB1 ACTN4 chr19 39221171 MZB1 chr5 138723257 Exonic hg19 NA BM719952 3'UTR-3'UTR Inter-chr q31.2 Tumor suppressor gene 117741 ChimerSeq ChiTaRs ChiTaRs MRPL38-MRPL38 MRPL38 chr17 73895809 MRPL38 chr17 73894946 Exonic hg19 NA BE844032 Out-of-frame Intra-chr q25.1 q25.1 117742 ChimerSeq ChiTaRs ChiTaRs MMP14-MMP14 MMP14 chr14 23315772 MMP14 chr14 23312509 Exonic hg19 NA AW608079 Out-of-frame Intra-chr q11.2 q11.2 117743 ChimerSeq ChiTaRs ChiTaRs MTMR4-ABR MTMR4 chr17 56581536 ABR chr17 986718 Exonic hg19 NA BE714892 Out-of-frame Intra-chr q22 p13.3 117744 ChimerSeq ChiTaRs ChiTaRs MTA1-MTA1 MTA1 chr14 105935291 MTA1 chr14 105934539 Exonic hg19 NA AA460861 Out-of-frame Intra-chr q32.33 q32.33 117745 ChimerSeq ChiTaRs ChiTaRs PLEKHJ1-PDCD6IP PLEKHJ1 chr19 2233521 PDCD6IP chr3 33906742 Exonic hg19 NA BF940958 Out-of-frame Inter-chr p13.3 p22.3 117746 ChimerSeq ChiTaRs ChiTaRs LASP1-RHBDL3 LASP1 chr17 37054772 RHBDL3 chr17 30651578 Exonic hg19 NA BM846678 CDS-3'UTR Intra-chr q12 q11.2 117747 ChimerSeq ChiTaRs ChiTaRs C17orf85-LRPAP1 C17orf85 chr17 3715747 LRPAP1 chr4 3516510 Exonic hg19 NA AI291741 Out-of-frame Inter-chr p16.3 117748 ChimerSeq ChiTaRs ChiTaRs CKB-CKB CKB chr14 103986893 CKB chr14 103986507 Exonic hg19 NA BQ320356 Out-of-frame Intra-chr q32.33 q32.33 117749 ChimerSeq ChiTaRs ChiTaRs COL1A1-COL1A1 COL1A1 chr17 48267082 COL1A1 chr17 48265456 Exonic hg19 NA CV338064 Out-of-frame Intra-chr q21.33 Oncogene q21.33 Oncogene 117750 ChimerSeq ChiTaRs ChiTaRs GPR56-GPR56 GPR56 chr16 57693356 GPR56 chr16 57693425 Exonic hg19 NA BQ368666 Out-of-frame Intra-chr q21 q21 117751 ChimerSeq ChiTaRs ChiTaRs SGSM2-PDCD6IP SGSM2 chr17 2276728 PDCD6IP chr3 33906874 Exonic hg19 NA BE836849 Out-of-frame Inter-chr p13.3 Transcription factor p22.3 117752 ChimerSeq ChiTaRs ChiTaRs CECR2-METAP2 CECR2 chr22 17982151 METAP2 chr12 95867988 Exonic hg19 NA CN366199 Out-of-frame Inter-chr q11.1 q22 117753 ChimerSeq ChiTaRs ChiTaRs DCTN2-HNRNPUL2 DCTN2 chr12 57924658 HNRNPUL2 chr11 62481201 Exonic hg19 NA AA612907 Out-of-frame Inter-chr q13.3 q12.3 117754 ChimerSeq ChiTaRs ChiTaRs EPS8L1-C15orf39 EPS8L1 chr19 55598113 C15orf39 chr15 75502932 Exonic hg19 NA BF883434 Out-of-frame Inter-chr q13.42 q24.2 117755 ChimerSeq ChiTaRs ChiTaRs ARHGAP17-NFIC ARHGAP17 chr16 24942686 NFIC chr19 3449057 Exonic hg19 NA BF946388 Out-of-frame Inter-chr p12.1 p13.3 Transcription factor 117756 ChimerSeq ChiTaRs ChiTaRs RSPRY1-MYH6 RSPRY1 chr16 57249039 MYH6 chr14 23853300 Exonic hg19 NA AW837199 Out-of-frame Inter-chr q13 q11.2 117757 ChimerSeq ChiTaRs ChiTaRs FAM222B-FAM222B FAM222B chr17 27086458 FAM222B chr17 27086840 Exonic hg19 NA CN426496 Out-of-frame Intra-chr q11.2 q11.2 117758 ChimerSeq ChiTaRs ChiTaRs FLI1-EWSR1 FLI1 chr11 128667504 EWSR1 chr22 29684300 Exonic hg19 NA JX266518 Out-of-frame Inter-chr q24.3 Oncogene Transcription factor q12.2 KB Pub 117759 ChimerSeq ChiTaRs ChiTaRs VPS4A-KLK3 VPS4A chr16 69358477 KLK3 chr19 51361161 Exonic hg19 NA BE835094 Out-of-frame Inter-chr q22.1 q13.33 117760 ChimerSeq ChiTaRs ChiTaRs KDELR1-SLC43A2 KDELR1 chr19 48886049 SLC43A2 chr17 1477719 Exonic hg19 NA DR980769 Out-of-frame Inter-chr q13.33 117761 ChimerSeq ChiTaRs ChiTaRs C2CD3-SOX4 C2CD3 chr11 73805006 SOX4 chr6 21597111 Exonic hg19 NA AX746958 Out-of-frame Inter-chr q13.4 p22.3 Transcription factor 117762 ChimerSeq ChiTaRs ChiTaRs SMARCB1-SMARCB1 SMARCB1 chr22 24134048 SMARCB1 chr22 24159045 Exonic hg19 NA BE719306 Out-of-frame Intra-chr q11.23 Oncogene Tumor suppressor gene q11.23 Oncogene Tumor suppressor gene 117763 ChimerSeq ChiTaRs ChiTaRs H1F0-SLC20A2 H1F0 chr22 38202211 SLC20A2 chr8 42318566 Exonic hg19 NA BF748516 Out-of-frame Inter-chr q13.1 p11.21 117764 ChimerSeq ChiTaRs ChiTaRs EEF2-OSR2 EEF2 chr19 3981418 OSR2 chr8 99961810 Exonic hg19 NA BQ308618 Out-of-frame Inter-chr p13.3 q22.2 Transcription factor 117765 ChimerSeq ChiTaRs ChiTaRs BLCAP-RSU1 BLCAP chr20 36151536 RSU1 chr10 16635365 Exonic hg19 NA BF734311 Out-of-frame Inter-chr q11.23 Tumor suppressor gene p13 117766 ChimerSeq ChiTaRs ChiTaRs OTUD5-ZBTB44 OTUD5 chrX 48779983 ZBTB44 chr11 130109699 Exonic hg19 NA AI743143 Out-of-frame Inter-chr p11.23 q24.3 Transcription factor 117767 ChimerSeq ChiTaRs ChiTaRs KANSL3-ITPKB KANSL3 chr2 97259279 ITPKB chr1 226819390 Exonic hg19 NA BF734773 3'UTR-3'UTR Inter-chr q11.2 q42.12 117768 ChimerSeq ChiTaRs ChiTaRs MTPN-RBPMS MTPN chr7 135645771 RBPMS chr8 30280953 Exonic hg19 NA AJ711463 Out-of-frame Inter-chr q33 p12 117769 ChimerSeq ChiTaRs ChiTaRs NXF1-CLEC18A NXF1 chr11 62559952 CLEC18A chr16 70192419 Exonic hg19 NA BE551533 Out-of-frame Inter-chr q12.3 q22.1 117770 ChimerSeq ChiTaRs ChiTaRs TCEAL3-TMEM179B TCEAL3 chrX 102864841 TMEM179B chr11 62557651 Exonic hg19 NA CB053893 Out-of-frame Inter-chr q22.2 q12.3 117771 ChimerSeq ChiTaRs ChiTaRs PSIP1-PSIP1 PSIP1 chr9 15474593 PSIP1 chr9 15472699 Exonic hg19 NA DA143253 Out-of-frame Intra-chr p22.3 Oncogene p22.3 Oncogene 117772 ChimerSeq ChiTaRs ChiTaRs DDX46-STARD13 DDX46 chr5 134165863 STARD13 chr13 33821384 Exonic hg19 NA AI743643 Out-of-frame Inter-chr q31.1 q13.1 Tumor suppressor gene 117773 ChimerSeq ChiTaRs ChiTaRs HSPG2-HSPG2 HSPG2 chr1 22207023 HSPG2 chr1 22241964 Exonic hg19 NA BE927253 Out-of-frame Intra-chr p36.12 p36.12 117774 ChimerSeq ChiTaRs ChiTaRs FAM115A-SDCCAG8 FAM115A chr7 143551220 SDCCAG8 chr1 243493962 Exonic hg19 NA BE172363 Out-of-frame Inter-chr 117775 ChimerSeq ChiTaRs ChiTaRs BCAP31-BCAP31 BCAP31 chrX 152967523 BCAP31 chrX 152966038 Exonic hg19 NA BE742553 Out-of-frame Intra-chr q28 q28 117776 ChimerSeq ChiTaRs ChiTaRs RAD50-IL5 RAD50 chr8 61822472 IL5 chr5 131877758 Exonic hg19 NA DQ655971 Out-of-frame Inter-chr q31.1 Oncogene q31.1 117777 ChimerSeq ChiTaRs ChiTaRs AIG1-GOSR1 AIG1 chr6 143458127 GOSR1 chr17 28808161 Exonic hg19 NA KC119451 Out-of-frame Inter-chr q24.2 q11.2 Pub 117778 ChimerSeq ChiTaRs ChiTaRs CD74-NGB CD74 chr5 149792313 NGB chr14 77736137 Exonic hg19 NA K01144 Out-of-frame Inter-chr q33.1 q24.3 Tumor suppressor gene 117779 ChimerSeq ChiTaRs ChiTaRs CCDC28A-IL22RA2 CCDC28A chr6 139101122 IL22RA2 chr6 137482892 Exonic hg19 NA KC819276 CDS-5'UTR Intra-chr q24.1 q23.3 KB Pub 117780 ChimerSeq ChiTaRs ChiTaRs UBR5-ZNF423 UBR5 chr8 103424489 ZNF423 chr16 49524522 Exonic hg19 NA KC155256 Out-of-frame Inter-chr q22.3 Oncogene q12.1 Transcription factor KB Pub 117781 ChimerSeq ChiTaRs ChiTaRs PAX5-C20orf112 PAX5 chr9 36882040 C20orf112 chr20 31044155 Exonic hg19 NA EU784148 Out-of-frame Inter-chr p13.2 Oncogene Tumor suppressor gene Transcription factor 117782 ChimerSeq ChiTaRs ChiTaRs SEC31A-BCKDHB SEC31A chr4 83765613 BCKDHB chr6 80865557 Exonic hg19 NA AF161393 Out-of-frame Inter-chr q21.22 q14.1 117783 ChimerSeq ChiTaRs ChiTaRs SEC31A-BCKDHB SEC31A chr4 83812306 BCKDHB chr6 80865557 Exonic hg19 NA CR933696 Out-of-frame Inter-chr q21.22 q14.1 117784 ChimerSeq ChiTaRs ChiTaRs SLC34A2-ZBTB43 SLC34A2 chr4 25679926 ZBTB43 chr9 129600373 Exonic hg19 NA BC142704 Out-of-frame Inter-chr p15.2 q33.3 Transcription factor 117785 ChimerSeq ChiTaRs ChiTaRs NCKIPSD-LPP NCKIPSD chr3 48723317 LPP chr3 188227492 Exonic hg19 NA BC026280 Out-of-frame Intra-chr p21.31 q27.3 Oncogene 117786 ChimerSeq ChiTaRs ChiTaRs PAX5-FOXP1 PAX5 chr9 37002676 FOXP1 chr3 71064770 Exonic hg19 NA EU784145 Out-of-frame Inter-chr p13.2 Oncogene Tumor suppressor gene Transcription factor p13 Oncogene Tumor suppressor gene Transcription factor Pub 117787 ChimerSeq ChiTaRs ChiTaRs TET1-HFM1 TET1 chr10 70451381 HFM1 chr1 91845786 Exonic hg19 NA AL713658 Out-of-frame Inter-chr q21.3 Oncogene Transcription factor p22.2 117788 ChimerSeq ChiTaRs ChiTaRs PAX7-TMEM57 PAX7 chr1 19062635 TMEM57 chr1 25768230 Exonic hg19 NA X96748 Out-of-frame Intra-chr p36.13 Oncogene Transcription factor p36.11 117789 ChimerSeq ChiTaRs ChiTaRs PAX3-PAX3 PAX3 chr2 223084416 PAX3 chr2 223066225 Exonic hg19 NA U12259 Out-of-frame Intra-chr q36.1 Oncogene Transcription factor q36.1 Oncogene Transcription factor 117790 ChimerSeq ChiTaRs ChiTaRs PAX3-MAML3 PAX3 chr2 223096922 MAML3 chr4 140812024 Exonic hg19 NA KF727277 Out-of-frame Inter-chr q36.1 Oncogene Transcription factor q31.1 KB Pub 117791 ChimerSeq ChiTaRs ChiTaRs EBF1-PDGFRB EBF1 chr5 158526486 PDGFRB chr5 149495326 Exonic hg19 NA JN003579 Out-of-frame Intra-chr q33.3 Transcription factor q32 Oncogene KB Pub 117792 ChimerSeq ChiTaRs ChiTaRs CCDC28A-IL22RA2 CCDC28A chr6 139101124 IL22RA2 chr6 137482892 Exonic hg19 NA KC819275 Out-of-frame Intra-chr q24.1 q23.3 KB Pub 117793 ChimerSeq ChiTaRs ChiTaRs IQGAP2-PDGFB IQGAP2 chr5 75943161 PDGFB chr22 39626074 Exonic hg19 NA K01400 Out-of-frame Inter-chr q13.3 Tumor suppressor gene q13.1 Oncogene 117794 ChimerSeq ChiTaRs ChiTaRs FGFR2-BICC1 FGFR2 chr10 123353331 BICC1 chr10 60461832 Exonic hg19 NA AB821310 Out-of-frame Intra-chr q26.13 TK:FGFR Oncogene q21.1 Seq+ 117795 ChimerSeq ChiTaRs ChiTaRs SEC31A-PPP2R2C SEC31A chr4 83740384 PPP2R2C chr4 6410602 Exonic hg19 NA AL049463 Out-of-frame Intra-chr q21.22 p16.1 Tumor suppressor gene 117796 ChimerSeq ChiTaRs ChiTaRs PJA2-FER PJA2 chr5 108745675 FER chr5 108373121 Exonic hg19 NA AB636596 5'UTR-CDS Intra-chr q21.3 q21.3 TK:Fer 117797 ChimerSeq ChiTaRs ChiTaRs SEC31A-BCKDHB SEC31A chr4 83763567 BCKDHB chr6 80865557 Exonic hg19 NA AF161452 Out-of-frame Inter-chr q21.22 q14.1 117798 ChimerSeq ChiTaRs ChiTaRs NBPF9-DPYD NBPF9 chr1 144994909 DPYD chr1 97956375 Exonic hg19 NA AB042557 Out-of-frame Intra-chr q21.2 p21.3 Oncogene 117799 ChimerSeq ChiTaRs ChiTaRs NRG1-NRG1 NRG1 chr8 31498245 NRG1 chr8 32453345 Exonic hg19 NA L12260 In-Frame Intra-chr p12 p12 117800 ChimerSeq ChiTaRs ChiTaRs REST-EAPP REST chr4 57777702 EAPP chr14 34985629 Exonic hg19 NA KF429249 Out-of-frame Inter-chr q12 Transcription factor q13.1 117801 ChimerSeq ChiTaRs ChiTaRs CENPK-CCSER1 CENPK chr5 64858985 CCSER1 chr4 91495403 Exonic hg19 NA BC005400 Out-of-frame Inter-chr q12.3 q22.1 117802 ChimerSeq ChiTaRs ChiTaRs BCL6-MLLT4 BCL6 chr3 187463229 MLLT4 chr6 168324301 Exonic hg19 NA BC150184 Out-of-frame Inter-chr q27.3 Oncogene Transcription factor 117803 ChimerSeq ChiTaRs ChiTaRs CREB1-CREB1 CREB1 chr2 208461798 CREB1 chr2 208435018 Exonic hg19 NA X55545 Out-of-frame Intra-chr q33.3 Oncogene Transcription factor q33.3 Oncogene Transcription factor 117804 ChimerSeq ChiTaRs ChiTaRs SLC44A4-ANKRD17 SLC44A4 chr6 3176652 ANKRD17 chr4 74084357 Exonic hg19 NA BC014659 Out-of-frame Inter-chr q13.3 117805 ChimerSeq ChiTaRs ChiTaRs UBE2J2-PRKAR1B UBE2J2 chr1 1450751 PRKAR1B chr7 598111 Exonic hg19 NA X60483 Out-of-frame Inter-chr p36.33 p22.3 117806 ChimerSeq ChiTaRs ChiTaRs CUL4B-DHX33 CUL4B chrX 119697349 DHX33 chr17 5360822 Exonic hg19 NA AY128657 Out-of-frame Inter-chr q24 p13.2 117807 ChimerSeq ChiTaRs ChiTaRs SNHG3-RCC1 SNHG3 chr1 28510892 RCC1 chr1 28505943 Exonic hg19 NA BC007300 Out-of-frame Intra-chr p35.3 p35.3 117808 ChimerSeq ChiTaRs ChiTaRs DNAJC25-GNG10 DNAJC25 chr9 111654351 GNG10 chr9 111661571 Exonic hg19 NA BC015391 Out-of-frame Intra-chr q31.3 q31.3 117809 ChimerSeq ChiTaRs ChiTaRs STON1-GTF2A1L STON1 chr2 48598515 GTF2A1L chr2 48617798 Exonic hg19 NA BC101772 Out-of-frame Intra-chr p16.3 p16.3 117810 ChimerSeq ChiTaRs ChiTaRs TRIM6-TRIM34 TRIM6 chr11 5612958 TRIM34 chr11 5619944 Exonic hg19 NA BC136871 Out-of-frame Intra-chr p15.4 p15.4 117811 ChimerSeq ChiTaRs ChiTaRs PALM2-AKAP2 PALM2 chr9 109951476 AKAP2 chr9 110048598 Exonic hg19 NA BC140818 Out-of-frame Intra-chr q31.3 q31.3 117812 ChimerSeq ChiTaRs ChiTaRs IGF2-INS IGF2 chr11 2149603 INS chr11 2159779 Exonic hg19 NA BC148488 Out-of-frame Intra-chr p15.5 Oncogene p15.5 117813 ChimerSeq ChiTaRs ChiTaRs ANKHD1-EIF4EBP3 ANKHD1 chr5 140539856 EIF4EBP3 chr5 140547666 Exonic hg19 NA BC172416 Out-of-frame Intra-chr q31.3 q31.3 117814 ChimerSeq ChiTaRs ChiTaRs PGBD3-ERCC6 PGBD3 chr10 49524281 ERCC6 chr10 49454480 Exonic hg19 NA NM_000124 Out-of-frame Intra-chr q11.23 117815 ChimerSeq ChiTaRs ChiTaRs FPGT-TNNI3K FPGT chr1 74208702 TNNI3K chr1 74235387 Exonic hg19 NA NM6777215 Out-of-frame Intra-chr p31.1 p31.1 117816 ChimerSeq ChiTaRs ChiTaRs SNHG4-MATR3 SNHG4 chr5 139283184 MATR3 chr5 139273752 Exonic hg19 NA NM6777215 Out-of-frame Intra-chr q31.2 q31.2 117817 ChimerSeq ChiTaRs ChiTaRs C8orf44-SGK3 C8orf44 chr8 66681149 SGK3 chr8 66712418 Exonic hg19 NA NM6777215 Out-of-frame Intra-chr q13.1 q13.1 AGC:SGK 117818 ChimerSeq ChiTaRs ChiTaRs MAGEA5-MAGEA10 MAGEA5 chrX 152117939 MAGEA10 chrX 152133310 Exonic hg19 NA NM6777215 Out-of-frame Intra-chr q28 q28 117819 ChimerSeq ChiTaRs ChiTaRs MROH7-TTC4 MROH7 chr1 54710266 TTC4 chr1 54715822 Exonic hg19 NA NM6777215 Out-of-frame Intra-chr p32.3 p32.3 Tumor suppressor gene 117820 ChimerSeq ChiTaRs ChiTaRs ZFP91-CNTF ZFP91 chr11 58621550 CNTF chr11 58622673 Exonic hg19 NA NR_024091 Out-of-frame Intra-chr q12.1 Transcription factor q12.1 117821 ChimerSeq ChiTaRs ChiTaRs TMUB2-TMUB2 TMUB2 chr17 42268019 TMUB2 chr17 42266803 Exonic hg19 NA BF754907 Out-of-frame Intra-chr q21.31 q21.31 117822 ChimerSeq ChiTaRs ChiTaRs PFKL-PFKL PFKL chr21 45732943 PFKL chr21 45745073 Exonic hg19 NA BI060191 Out-of-frame Intra-chr q22.3 q22.3 117823 ChimerSeq ChiTaRs ChiTaRs PPP6R1-ZGLP1 PPP6R1 chr19 55769840 ZGLP1 chr19 10418932 Exonic hg19 NA BM766818 Out-of-frame Intra-chr q13.42 p13.2 Transcription factor 117824 ChimerSeq ChiTaRs ChiTaRs ATP5B-ATP5B ATP5B chr12 57032030 ATP5B chr12 57032029 Exonic hg19 NA CA312538 Out-of-frame Intra-chr q13.3 q13.3 117825 ChimerSeq ChiTaRs ChiTaRs WBP2-NUP85 WBP2 chr17 73851410 NUP85 chr17 73211843 Exonic hg19 NA DB001249 Out-of-frame Intra-chr q25.1 q25.1 117826 ChimerSeq ChiTaRs ChiTaRs ELL3-ELL3 ELL3 chr15 44086197 ELL3 chr15 44085951 Exonic hg19 NA AA063240 Out-of-frame Intra-chr q15.3 q15.3 117827 ChimerSeq ChiTaRs ChiTaRs NEDD4L-IL1R1 NEDD4L chr18 56042192 IL1R1 chr2 102794681 Exonic hg19 NA BE842555 Out-of-frame Inter-chr q21.31 Tumor suppressor gene q11.2 117828 ChimerSeq ChiTaRs ChiTaRs SLC25A3-CDC42BPB SLC25A3 chr12 98987693 CDC42BPB chr14 103406434 Exonic hg19 NA BQ674428 Out-of-frame Inter-chr q23.1 q32.32 117829 ChimerSeq ChiTaRs ChiTaRs MYH9-SLC44A4 MYH9 chr22 36728125 SLC44A4 chr6 3171348 Exonic hg19 NA BI026665 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene 117830 ChimerSeq ChiTaRs ChiTaRs LOC100507373-LOC100507373 LOC100507373 chr19 14277207 LOC100507373 chr19 14277521 Exonic hg19 NA BG950453 Out-of-frame Intra-chr 117831 ChimerSeq ChiTaRs ChiTaRs GNA11-REG1A GNA11 chr19 3119254 REG1A chr2 79350483 Exonic hg19 NA CK818891 Out-of-frame Inter-chr p13.3 Oncogene p12 117832 ChimerSeq ChiTaRs ChiTaRs MAPK1-RFT1 MAPK1 chr22 22117064 RFT1 chr3 53126586 Exonic hg19 NA AW376337 Out-of-frame Inter-chr q11.22 Oncogene p21.1 117833 ChimerSeq ChiTaRs ChiTaRs COL2A1-COL2A1 COL2A1 chr12 48380957 COL2A1 chr12 48377909 Exonic hg19 NA CN406547 Out-of-frame Intra-chr q13.11 q13.11 117834 ChimerSeq ChiTaRs ChiTaRs LTBP4-LTBP4 LTBP4 chr19 41129881 LTBP4 chr19 41128427 Exonic hg19 NA AA580244 Out-of-frame Intra-chr q13.2 q13.2 117835 ChimerSeq ChiTaRs ChiTaRs CTDSPL2-NME3 CTDSPL2 chr15 44738915 NME3 chr16 1820321 Exonic hg19 NA AA688018 Out-of-frame Inter-chr q15.3 p13.3 117836 ChimerSeq ChiTaRs ChiTaRs RHOT1-RHOT1 RHOT1 chr17 30552511 RHOT1 chr17 30552295 Exonic hg19 NA CB242812 Out-of-frame Intra-chr q11.2 q11.2 117837 ChimerSeq ChiTaRs ChiTaRs HDAC7-HDAC7 HDAC7 chr12 48213061 HDAC7 chr12 48191891 Exonic hg19 NA AA286791 Out-of-frame Intra-chr q13.11 q13.11 117838 ChimerSeq ChiTaRs ChiTaRs SOD1-CXCL9 SOD1 chr21 33040852 CXCL9 chr4 76924037 Exonic hg19 NA AW389351 Out-of-frame Inter-chr q22.11 q21.1 117839 ChimerSeq ChiTaRs ChiTaRs THRA-THRA THRA chr17 38247665 THRA chr17 38219260 Exonic hg19 NA AW410853 Out-of-frame Intra-chr q21.1 Tumor suppressor gene Transcription factor q21.1 Tumor suppressor gene Transcription factor 117840 ChimerSeq ChiTaRs ChiTaRs TCF3-ZNF384 TCF3 chr19 1622200 ZNF384 chr12 6788111 Exonic hg19 NA EU155119 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p13.31 Oncogene Transcription factor KB Pub 117841 ChimerSeq ChiTaRs ChiTaRs SEC23B-SEC23B SEC23B chr20 18508204 SEC23B chr20 18513306 Exonic hg19 NA AW361690 Out-of-frame Intra-chr p11.23 p11.23 117842 ChimerSeq ChiTaRs ChiTaRs AP2B1-DDX24 AP2B1 chr17 33984668 DDX24 chr14 94526594 Exonic hg19 NA AW380805 Out-of-frame Inter-chr q12 117843 ChimerSeq ChiTaRs ChiTaRs FBRSL1-GNAO1 FBRSL1 chr12 133160878 GNAO1 chr16 56374478 Exonic hg19 NA DB344809 Out-of-frame Inter-chr q24.33 q13 117844 ChimerSeq ChiTaRs ChiTaRs TNPO2-TNPO2 TNPO2 chr19 12816350 TNPO2 chr19 12816577 Exonic hg19 NA CF138505 Out-of-frame Intra-chr p13.13 p13.13 117845 ChimerSeq ChiTaRs ChiTaRs MEGF11-MEGF11 MEGF11 chr15 66207852 MEGF11 chr15 66198429 Exonic hg19 NA BF528338 Out-of-frame Intra-chr q22.31 q22.31 117846 ChimerSeq ChiTaRs ChiTaRs GAS8-MYH10 GAS8 chr16 90096556 MYH10 chr17 8512432 Exonic hg19 NA CV360528 Out-of-frame Inter-chr q24.3 p13.1 117847 ChimerSeq ChiTaRs ChiTaRs BAX-HMGA1 BAX chr19 49459467 HMGA1 chr6 34212770 Exonic hg19 NA BG748407 Out-of-frame Inter-chr q13.33 Tumor suppressor gene p21.31 Transcription factor 117848 ChimerSeq ChiTaRs ChiTaRs ILF3-ILF3 ILF3 chr19 10799605 ILF3 chr19 10799521 Exonic hg19 NA BE162985 Out-of-frame Intra-chr p13.2 p13.2 117849 ChimerSeq ChiTaRs ChiTaRs NCOA6-NCOA6 NCOA6 chr20 33329448 NCOA6 chr20 33328930 Exonic hg19 NA BF992646 Out-of-frame Intra-chr q11.22 q11.22 117850 ChimerSeq ChiTaRs ChiTaRs KRT13-KRT13 KRT13 chr17 39657421 KRT13 chr17 39657255 Exonic hg19 NA AW265336 Out-of-frame Intra-chr q21.2 q21.2 117851 ChimerSeq ChiTaRs ChiTaRs EEF2-EEF2 EEF2 chr19 3982276 EEF2 chr19 3982246 Exonic hg19 NA CN271708 Out-of-frame Intra-chr p13.3 p13.3 117852 ChimerSeq ChiTaRs ChiTaRs RPS6KA5-CA5BP1 RPS6KA5 chr14 91338578 CA5BP1 chrX 15720857 Exonic hg19 NA BF747964 Out-of-frame Inter-chr q32.11 p22.2 117853 ChimerSeq ChiTaRs ChiTaRs DYRK1B-SENP3 DYRK1B chr19 40317450 SENP3 chr17 7468276 Exonic hg19 NA CN408345 Out-of-frame Inter-chr CMGC:DYRK p13.1 117854 ChimerSeq ChiTaRs ChiTaRs CSH1-CALD1 CSH1 chr17 61973933 CALD1 chr7 134632455 Exonic hg19 NA DA860690 Out-of-frame Inter-chr q23.3 q33 117855 ChimerSeq ChiTaRs ChiTaRs SLC9A3R1-SLC9A3R1 SLC9A3R1 chr17 72764863 SLC9A3R1 chr17 72764303 Exonic hg19 NA BE697345 Out-of-frame Intra-chr q25.1 Tumor suppressor gene q25.1 Tumor suppressor gene 117856 ChimerSeq ChiTaRs ChiTaRs PRKD1-WAC PRKD1 chr14 30216702 WAC chr10 28897227 Exonic hg19 NA AW580521 Out-of-frame Inter-chr q12 p12.1 117857 ChimerSeq ChiTaRs ChiTaRs RPS9-P4HB RPS9 chr19 54705054 P4HB chr17 79803074 Exonic hg19 NA AW410007 Out-of-frame Inter-chr q25.3 117858 ChimerSeq ChiTaRs ChiTaRs DCXR-DCXR DCXR chr17 79994617 DCXR chr17 79993893 Exonic hg19 NA BF761198 Out-of-frame Intra-chr q25.3 q25.3 117859 ChimerSeq ChiTaRs ChiTaRs LOC100128682-A2M LOC100128682 chr19 35897573 A2M chr12 9221369 Exonic hg19 NA BF923332 Out-of-frame Inter-chr p13.31 117860 ChimerSeq ChiTaRs ChiTaRs TAGLN-LRRC61 TAGLN chr11 117075508 LRRC61 chr7 150034493 Exonic hg19 NA AA468776 3'UTR-CDS Inter-chr q23.3 Tumor suppressor gene q36.1 117861 ChimerSeq ChiTaRs ChiTaRs EP300-DAZAP2 EP300 chr22 41573997 DAZAP2 chr12 51634135 Exonic hg19 NA AW366672 Out-of-frame Inter-chr q13.2 Oncogene q13.13 117862 ChimerSeq ChiTaRs ChiTaRs ARVCF-ARVCF ARVCF chr22 19957980 ARVCF chr22 19961711 Exonic hg19 NA BF327075 Out-of-frame Intra-chr q11.21 q11.21 117863 ChimerSeq ChiTaRs ChiTaRs SERPINF1-WDR1 SERPINF1 chr17 1679946 WDR1 chr4 10089478 Exonic hg19 NA AA864346 Out-of-frame Inter-chr p16.1 117864 ChimerSeq ChiTaRs ChiTaRs MYO18A-MYO18A MYO18A chr17 27400729 MYO18A chr17 27400598 Exonic hg19 NA BE171182 Out-of-frame Intra-chr q11.2 Oncogene q11.2 Oncogene 117865 ChimerSeq ChiTaRs ChiTaRs ANKRD11-ANKRD11 ANKRD11 chr16 89349892 ANKRD11 chr16 89349325 Exonic hg19 NA CB178636 Out-of-frame Intra-chr q24.3 q24.3 117866 ChimerSeq ChiTaRs ChiTaRs NEMF-PARM1 NEMF chr14 50047125 PARM1 chr4 75858546 Exonic hg19 NA BF812767 Out-of-frame Inter-chr q21.3 q13.3 117867 ChimerSeq ChiTaRs ChiTaRs PICK1-SPINT2 PICK1 chr22 38462375 SPINT2 chr19 38782774 Exonic hg19 NA BE830538 Out-of-frame Inter-chr q13.1 q13.2 Tumor suppressor gene 117868 ChimerSeq ChiTaRs ChiTaRs RBM25-RBM25 RBM25 chr14 73576085 RBM25 chr14 73572611 Exonic hg19 NA BG944817 Out-of-frame Intra-chr q24.2 q24.2 117869 ChimerSeq ChiTaRs ChiTaRs PYGB-ACAA1 PYGB chr20 25255316 ACAA1 chr3 38168011 Exonic hg19 NA DA055429 Out-of-frame Inter-chr p11.21 p22.2 117870 ChimerSeq ChiTaRs ChiTaRs DIDO1-LOC100507351 DIDO1 chr20 61536671 LOC100507351 chr17 75551817 Exonic hg19 NA BF510005 Out-of-frame Inter-chr q13.33 Tumor suppressor gene 117871 ChimerSeq ChiTaRs ChiTaRs ENGASE-ENGASE ENGASE chr17 77079869 ENGASE chr17 77077099 Exonic hg19 NA BF365939 Out-of-frame Intra-chr q25.3 q25.3 117872 ChimerSeq ChiTaRs ChiTaRs DPF2-SART1 DPF2 chr11 65101389 SART1 chr11 65743998 Exonic hg19 NA DA701734 Out-of-frame Intra-chr q13.1 q13.1 117873 ChimerSeq ChiTaRs ChiTaRs DOPEY2-DOPEY2 DOPEY2 chr21 37618200 DOPEY2 chr21 37617797 Exonic hg19 NA BX494106 Out-of-frame Intra-chr q22.12 q22.12 117874 ChimerSeq ChiTaRs ChiTaRs MLL-MLL MLL chr11 118355030 MLL chr11 118339488 Exonic hg19 NA AY187945 Out-of-frame Intra-chr q23.3 q23.3 117875 ChimerSeq ChiTaRs ChiTaRs HBM-HBM HBM chr16 216762 HBM chr16 216265 Exonic hg19 NA AI184430 Out-of-frame Intra-chr p13.3 p13.3 117876 ChimerSeq ChiTaRs ChiTaRs NUCB1-NUCB1 NUCB1 chr19 49426528 NUCB1 chr19 49424524 Exonic hg19 NA BM983542 Out-of-frame Intra-chr q13.33 q13.33 117877 ChimerSeq ChiTaRs ChiTaRs MFAP1-MFAP1 MFAP1 chr15 44109566 MFAP1 chr15 44105248 Exonic hg19 NA EB360877 Out-of-frame Intra-chr q15.3 q15.3 117878 ChimerSeq ChiTaRs ChiTaRs PLXNB2-PLXNB2 PLXNB2 chr22 50730363 PLXNB2 chr22 50730368 Exonic hg19 NA BI033029 Out-of-frame Intra-chr q13.33 q13.33 117879 ChimerSeq ChiTaRs ChiTaRs ANKLE2-HLA-B ANKLE2 chr12 133313650 HLA-B chr6 2656913 Exonic hg19 NA AW389457 Out-of-frame Inter-chr q24.33 117880 ChimerSeq ChiTaRs ChiTaRs RTN3-HELLS RTN3 chr11 63526522 HELLS chr10 96313882 Exonic hg19 NA CN480729 3'UTR-CDS Inter-chr q13.1 q23.33 117881 ChimerSeq ChiTaRs ChiTaRs BCAM-PES1 BCAM chr19 45322946 PES1 chr22 30972755 Exonic hg19 NA BF834926 Out-of-frame Inter-chr q13.32 q12.2 117882 ChimerSeq ChiTaRs ChiTaRs PRKCSH-PRKCSH PRKCSH chr19 11557903 PRKCSH chr19 11557937 Exonic hg19 NA BE938446 Out-of-frame Intra-chr p13.2 p13.2 117883 ChimerSeq ChiTaRs ChiTaRs DDX42-MT1F DDX42 chr17 61895671 MT1F chr16 56691909 Exonic hg19 NA AI061609 Out-of-frame Inter-chr q23.3 q13 Tumor suppressor gene 117884 ChimerSeq ChiTaRs ChiTaRs VWF-RAD23A VWF chr12 6126059 RAD23A chr19 13058664 Exonic hg19 NA AW581101 Out-of-frame Inter-chr p13.31 p13.13 117885 ChimerSeq ChiTaRs ChiTaRs PSMC5-PSMC5 PSMC5 chr17 61908502 PSMC5 chr17 61908522 Exonic hg19 NA CV422250 Out-of-frame Intra-chr q23.3 q23.3 117886 ChimerSeq ChiTaRs ChiTaRs RPL28-GLB1 RPL28 chr19 55899416 GLB1 chr3 33114063 Exonic hg19 NA DA524376 In-Frame Inter-chr q13.42 p22.3 117887 ChimerSeq ChiTaRs ChiTaRs CTTN-MYC CTTN chr11 70260711 MYC chr8 128752824 Exonic hg19 NA BG953255 Out-of-frame Inter-chr q13.3 q24.21 Oncogene Transcription factor 117888 ChimerSeq ChiTaRs ChiTaRs NEAT1-CSF3R NEAT1 chr11 65190685 CSF3R chr1 36931679 Exonic hg19 NA C18833 Out-of-frame Inter-chr q13.1 p34.3 117889 ChimerSeq ChiTaRs ChiTaRs PLXNB2-CSNK1E PLXNB2 chr22 50719618 CSNK1E chr22 38687373 Exonic hg19 NA BF875561 CDS-3'UTR Intra-chr q13.33 q13.1 117890 ChimerSeq ChiTaRs ChiTaRs ATP5A1-NEFL ATP5A1 chr18 43678251 NEFL chr8 24813798 Exonic hg19 NA DA148364 Out-of-frame Inter-chr q21.1 p21.2 117891 ChimerSeq ChiTaRs ChiTaRs PTBP1-PTBP1 PTBP1 chr19 804354 PTBP1 chr19 797449 Exonic hg19 NA AW881297 Out-of-frame Intra-chr p13.3 p13.3 117892 ChimerSeq ChiTaRs ChiTaRs KIF3B-SMC2 KIF3B chr20 30898984 SMC2 chr9 106889599 Exonic hg19 NA BF908969 In-Frame Inter-chr q11.21 q31.1 117893 ChimerSeq ChiTaRs ChiTaRs PPDPF-PPDPF PPDPF chr20 62153516 PPDPF chr20 62153394 Exonic hg19 NA AA679651 Out-of-frame Intra-chr q13.33 q13.33 117894 ChimerSeq ChiTaRs ChiTaRs RMI2-SPATA20 RMI2 chr16 11370336 SPATA20 chr17 48627411 Exonic hg19 NA DB024173 Out-of-frame Inter-chr p13.13 q21.33 117895 ChimerSeq ChiTaRs ChiTaRs ATP2C2-ATP2C2 ATP2C2 chr16 84495389 ATP2C2 chr16 84485657 Exonic hg19 NA AF114127 Out-of-frame Intra-chr q24.1 q24.1 117896 ChimerSeq ChiTaRs ChiTaRs CSH1-RRBP1 CSH1 chr17 61972475 RRBP1 chr20 17640554 Exonic hg19 NA BG013671 Out-of-frame Inter-chr q23.3 p12.1 117897 ChimerSeq ChiTaRs ChiTaRs CUL4A-CUL4A CUL4A chr13 113884395 CUL4A chr13 113884071 Exonic hg19 NA AW389415 Out-of-frame Intra-chr q34 q34 117898 ChimerSeq ChiTaRs ChiTaRs RPL21-ELF3 RPL21 chr13 27829269 ELF3 chr1 201979753 Exonic hg19 NA DA999428 Out-of-frame Inter-chr q12.2 q32.1 Transcription factor 117899 ChimerSeq ChiTaRs ChiTaRs MED24-MED24 MED24 chr17 38189891 MED24 chr17 38189951 Exonic hg19 NA CV410516 Out-of-frame Intra-chr q21.1 q21.1 117900 ChimerSeq ChiTaRs ChiTaRs UNC13C-COL1A1 UNC13C chr15 54448151 COL1A1 chr17 48261599 Exonic hg19 NA BG997109 Out-of-frame Inter-chr q21.3 q21.33 Oncogene 117901 ChimerSeq ChiTaRs ChiTaRs CELSR1-MOB3A CELSR1 chr22 46859900 MOB3A chr19 2071532 Exonic hg19 NA BF841962 Out-of-frame Inter-chr q13.31 p13.3 117902 ChimerSeq ChiTaRs ChiTaRs SPECC1L-SPECC1L SPECC1L chr22 24709434 SPECC1L chr22 24698158 Exonic hg19 NA BF746909 CDS-5'UTR Intra-chr q11.23 q11.23 117903 ChimerSeq ChiTaRs ChiTaRs C14orf2-SLTM C14orf2 chr14 104387866 SLTM chr15 59186660 Exonic hg19 NA DW417059 Out-of-frame Inter-chr q32.33 q22.1 117904 ChimerSeq ChiTaRs ChiTaRs GOLGA3-PIK3R5 GOLGA3 chr12 133381351 PIK3R5 chr17 8847922 Exonic hg19 NA BF903043 Out-of-frame Inter-chr q24.33 p13.1 117905 ChimerSeq ChiTaRs ChiTaRs TRAFD1-TRAFD1 TRAFD1 chr12 112583466 TRAFD1 chr12 112585880 Exonic hg19 NA BF928333 In-Frame Intra-chr q24.13 Transcription factor q24.13 Transcription factor 117906 ChimerSeq ChiTaRs ChiTaRs LAMP1-PSD LAMP1 chr13 113976906 PSD chr10 104165600 Exonic hg19 NA BI045069 Out-of-frame Inter-chr q34 Oncogene q24.32 117907 ChimerSeq ChiTaRs ChiTaRs PACS1-PACS1 PACS1 chr11 65977925 PACS1 chr11 65838218 Exonic hg19 NA BG007077 Out-of-frame Intra-chr q13.1 q13.1 117908 ChimerSeq ChiTaRs ChiTaRs ZIM2-PRR14 ZIM2 chr19 57352120 PRR14 chr16 30663125 Exonic hg19 NA BI545147 Out-of-frame Inter-chr q13.43 Transcription factor p11.2 117909 ChimerSeq ChiTaRs ChiTaRs MLL-MLL MLL chr11 118363838 MLL chr11 118352599 Exonic hg19 NA AF232001 Out-of-frame Intra-chr q23.3 q23.3 117910 ChimerSeq ChiTaRs ChiTaRs RPS6KB1-PCNXL2 RPS6KB1 chr17 57970686 PCNXL2 chr1 233192977 Exonic hg19 NA DA304248 Out-of-frame Inter-chr q23.1 Oncogene 117911 ChimerSeq ChiTaRs ChiTaRs OPA3-OPA3 OPA3 chr19 46054206 OPA3 chr19 46056547 Exonic hg19 NA BG994361 Out-of-frame Intra-chr q13.32 q13.32 117912 ChimerSeq ChiTaRs ChiTaRs AP2A1-NECAB3 AP2A1 chr19 50292064 NECAB3 chr20 32247515 Exonic hg19 NA BE818164 Out-of-frame Inter-chr q13.33 q11.22 117913 ChimerSeq ChiTaRs ChiTaRs RAD9A-PPP1CA RAD9A chr11 67165982 PPP1CA chr11 67168355 Exonic hg19 NA BI029138 Out-of-frame Intra-chr q13.2 q13.2 Tumor suppressor gene Seq+ 117914 ChimerSeq ChiTaRs ChiTaRs GSDMB-MIR3134 GSDMB chr17 38073480 MIR3134 chr9 114820946 Exonic hg19 NA BF373142 Out-of-frame Inter-chr q21.1 p25.1 117915 ChimerSeq ChiTaRs ChiTaRs FBXO34-SSRP1 FBXO34 chr14 55817552 SSRP1 chr11 57093836 Exonic hg19 NA AA699458 Out-of-frame Inter-chr q22.3 q12.1 117916 ChimerSeq ChiTaRs ChiTaRs CCDC130-CCDC130 CCDC130 chr19 13873656 CCDC130 chr19 13873672 Exonic hg19 NA BM695352 Out-of-frame Intra-chr p13.13 p13.13 117917 ChimerSeq ChiTaRs ChiTaRs EIF3CL-MED24 EIF3CL chr16 28412620 MED24 chr17 38176138 Exonic hg19 NA BG957436 Out-of-frame Inter-chr p12.1 q21.1 117918 ChimerSeq ChiTaRs ChiTaRs ATP13A1-SYNCRIP ATP13A1 chr19 19756133 SYNCRIP chr6 86352841 Exonic hg19 NA AW274852 Out-of-frame Inter-chr p13.11 q14.3 117919 ChimerSeq ChiTaRs ChiTaRs PAN3-RAPGEF5 PAN3 chr13 28780190 RAPGEF5 chr7 22158030 Exonic hg19 NA BF910655 Out-of-frame Inter-chr q12.2 p15.3 117920 ChimerSeq ChiTaRs ChiTaRs APOE-APOE APOE chr19 45411949 APOE chr19 45411053 Exonic hg19 NA AI680935 Out-of-frame Intra-chr q13.32 q13.32 117921 ChimerSeq ChiTaRs ChiTaRs PRKCSH-PRKCSH PRKCSH chr19 11560161 PRKCSH chr19 11556248 Exonic hg19 NA BF746637 Out-of-frame Intra-chr p13.2 p13.2 117922 ChimerSeq ChiTaRs ChiTaRs NFIC-NFIC NFIC chr19 3463300 NFIC chr19 3462850 Exonic hg19 NA BM459714 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Transcription factor 117923 ChimerSeq ChiTaRs ChiTaRs PPP6R1-ZGLP1 PPP6R1 chr19 55769840 ZGLP1 chr19 10416064 Exonic hg19 NA BM771447 Out-of-frame Intra-chr q13.42 p13.2 Transcription factor 117924 ChimerSeq ChiTaRs ChiTaRs C15orf27-C15orf27 C15orf27 chr15 76501139 C15orf27 chr15 76501184 Exonic hg19 NA BE158262 Out-of-frame Intra-chr 117925 ChimerSeq ChiTaRs ChiTaRs TMTC1-C1orf122 TMTC1 chr12 29920989 C1orf122 chr1 38273950 Exonic hg19 NA BE671342 Out-of-frame Inter-chr p11.22 p34.3 117926 ChimerSeq ChiTaRs ChiTaRs C19orf70-TRAF3IP3 C19orf70 chr19 5680172 TRAF3IP3 chr1 209950789 Exonic hg19 NA BI011765 Out-of-frame Inter-chr p13.3 q32.2 117927 ChimerSeq ChiTaRs ChiTaRs EEF2-EEF2 EEF2 chr19 3978172 EEF2 chr19 3979344 Exonic hg19 NA BF801948 Out-of-frame Intra-chr p13.3 p13.3 117928 ChimerSeq ChiTaRs ChiTaRs LAMP1-MCF2L LAMP1 chr13 113951812 MCF2L chr13 113718617 Exonic hg19 NA XX000014 Out-of-frame Intra-chr q34 Oncogene q34 117929 ChimerSeq ChiTaRs ChiTaRs SDHAF1-TG SDHAF1 chr19 36487009 TG chr8 133945842 Exonic hg19 NA BI002377 Out-of-frame Inter-chr q13.12 q24.22 117930 ChimerSeq ChiTaRs ChiTaRs CLPTM1-RPL13 CLPTM1 chr19 45494627 RPL13 chr16 89628766 Exonic hg19 NA BE933378 Out-of-frame Inter-chr q13.32 q24.3 117931 ChimerSeq ChiTaRs ChiTaRs PLA2G6-CLTCL1 PLA2G6 chr22 38560662 CLTCL1 chr22 19228368 Exonic hg19 NA CV375307 Out-of-frame Intra-chr q13.1 q11.21 117932 ChimerSeq ChiTaRs ChiTaRs MPHOSPH8-MPHOSPH8 MPHOSPH8 chr13 20221071 MPHOSPH8 chr13 20221274 Exonic hg19 NA AI857307 Out-of-frame Intra-chr q12.11 q12.11 117933 ChimerSeq ChiTaRs ChiTaRs HN1-HN1 HN1 chr17 73131441 HN1 chr17 73131425 Exonic hg19 NA CB240950 Out-of-frame Intra-chr 117934 ChimerSeq ChiTaRs ChiTaRs JMJD7-PLA2G4B-SPARC JMJD7-PLA2G4B chr15 42140330 SPARC chr5 151055693 Exonic hg19 NA AW469613 Out-of-frame Inter-chr q15.1 q33.1 117935 ChimerSeq ChiTaRs ChiTaRs PSMD8-HDLBP PSMD8 chr19 38867047 HDLBP chr2 242195674 Exonic hg19 NA DW427896 Out-of-frame Inter-chr q13.2 q37.3 117936 ChimerSeq ChiTaRs ChiTaRs RBM14-RBM14 RBM14 chr11 66393100 RBM14 chr11 66392305 Exonic hg19 NA AA427767 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 Tumor suppressor gene 117937 ChimerSeq ChiTaRs ChiTaRs PPP6R2-INTS3 PPP6R2 chr22 50881713 INTS3 chr1 153736319 Exonic hg19 NA BE932672 Out-of-frame Inter-chr q13.33 q21.3 117938 ChimerSeq ChiTaRs ChiTaRs DGCR2-DGCR2 DGCR2 chr22 19050749 DGCR2 chr22 19029423 Exonic hg19 NA AI751109 Out-of-frame Intra-chr q11.21 q11.21 117939 ChimerSeq ChiTaRs ChiTaRs ANXA2-SPRR2A ANXA2 chr15 60657832 SPRR2A chr1 153028861 Exonic hg19 NA BE181532 Out-of-frame Inter-chr q22.2 q21.3 117940 ChimerSeq ChiTaRs ChiTaRs DZIP1-DZIP1 DZIP1 chr13 96242573 DZIP1 chr13 96237088 Exonic hg19 NA CB851408 Out-of-frame Intra-chr q32.1 Transcription factor q32.1 Transcription factor 117941 ChimerSeq ChiTaRs ChiTaRs CACNA1H-CACNA1H CACNA1H chr16 1271460 CACNA1H chr16 1271296 Exonic hg19 NA AW845336 Out-of-frame Intra-chr p13.3 p13.3 117942 ChimerSeq ChiTaRs ChiTaRs POU6F1-QSOX1 POU6F1 chr12 51590644 QSOX1 chr1 180165869 Exonic hg19 NA BF871819 Out-of-frame Inter-chr q13.13 Transcription factor q25.2 117943 ChimerSeq ChiTaRs ChiTaRs B2M-PCBP1 B2M chr15 45010144 PCBP1 chr2 70315524 Exonic hg19 NA AW375764 Out-of-frame Inter-chr Oncogene p13.3 117944 ChimerSeq ChiTaRs ChiTaRs RBBP6-CEP350 RBBP6 chr16 24578642 CEP350 chr1 179983284 Exonic hg19 NA BG015559 Out-of-frame Inter-chr p12.1 q25.2 117945 ChimerSeq ChiTaRs ChiTaRs CIRBP-CIRBP CIRBP chr19 1273171 CIRBP chr19 1272962 Exonic hg19 NA CN478954 3'UTR-CDS Intra-chr p13.3 p13.3 117946 ChimerSeq ChiTaRs ChiTaRs CRYL1-ATPAF1 CRYL1 chr13 21099965 ATPAF1 chr1 47133873 Exonic hg19 NA BP276779 Out-of-frame Inter-chr q12.11 p33 117947 ChimerSeq ChiTaRs ChiTaRs RAB31-RAB31 RAB31 chr18 9859592 RAB31 chr18 9775274 Exonic hg19 NA AA854225 3'UTR-CDS Intra-chr p11.22 p11.22 117948 ChimerSeq ChiTaRs ChiTaRs GFAP-GFAP GFAP chr17 42992741 GFAP chr17 42991408 Exonic hg19 NA BQ343685 Out-of-frame Intra-chr q21.31 q21.31 117949 ChimerSeq ChiTaRs ChiTaRs LTBP4-LTBP4 LTBP4 chr19 41129888 LTBP4 chr19 41129867 Exonic hg19 NA AI952559 Out-of-frame Intra-chr q13.2 q13.2 117950 ChimerSeq ChiTaRs ChiTaRs MYADM-SPIDR MYADM chr19 54377459 SPIDR chr8 48511665 Exonic hg19 NA BI024730 Out-of-frame Inter-chr q13.42 q11.21 117951 ChimerSeq ChiTaRs ChiTaRs CSNK2A1-CSNK2A1 CSNK2A1 chr20 519798 CSNK2A1 chr20 519490 Exonic hg19 NA AA659846 Out-of-frame Intra-chr p13 Oncogene p13 Oncogene 117952 ChimerSeq ChiTaRs ChiTaRs IDH2-IDH2 IDH2 chr15 90630761 IDH2 chr15 90631591 Exonic hg19 NA AA091237 Out-of-frame Intra-chr q26.1 Oncogene q26.1 Oncogene 117953 ChimerSeq ChiTaRs ChiTaRs CD9-CD9 CD9 chr12 6344412 CD9 chr12 6341819 Exonic hg19 NA AA729962 Out-of-frame Intra-chr p13.31 p13.31 117954 ChimerSeq ChiTaRs ChiTaRs CD3E-ORAI2 CD3E chr11 118175657 ORAI2 chr7 102074052 Exonic hg19 NA DB115683 Out-of-frame Inter-chr q23.3 q22.1 117955 ChimerSeq ChiTaRs ChiTaRs FUS-MARS FUS chr16 31193985 MARS chr12 57911163 Exonic hg19 NA AJ301612 CDS-3'UTR Inter-chr p11.2 Tumor suppressor gene q13.3 117956 ChimerSeq ChiTaRs ChiTaRs DUOX2-ERC2 DUOX2 chr15 45385842 ERC2 chr3 55659483 Exonic hg19 NA BF829816 Out-of-frame Inter-chr q21.1 p14.3 117957 ChimerSeq ChiTaRs ChiTaRs COL6A1-COL6A1 COL6A1 chr21 47421297 COL6A1 chr21 47422284 Exonic hg19 NA BF946591 Out-of-frame Intra-chr q22.3 q22.3 117958 ChimerSeq ChiTaRs ChiTaRs DAZAP2-BOLA2 DAZAP2 chr12 51634881 BOLA2 chr16 29874181 Exonic hg19 NA DA014768 Out-of-frame Inter-chr q13.13 p11.2 117959 ChimerSeq ChiTaRs ChiTaRs A1BG-A1BG A1BG chr19 58863007 A1BG chr19 58858971 Exonic hg19 NA CB162062 Out-of-frame Intra-chr q13.43 q13.43 117960 ChimerSeq ChiTaRs ChiTaRs MYH9-MYH9 MYH9 chr22 36702008 MYH9 chr22 36697691 Exonic hg19 NA BG990657 Out-of-frame Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Oncogene Tumor suppressor gene 117961 ChimerSeq ChiTaRs ChiTaRs RFX1-RFX1 RFX1 chr19 14074740 RFX1 chr19 14073988 Exonic hg19 NA BE771835 Out-of-frame Intra-chr p13.12 Transcription factor p13.12 Transcription factor 117962 ChimerSeq ChiTaRs ChiTaRs LTBR-WDTC1 LTBR chr12 6499949 WDTC1 chr1 27633740 Exonic hg19 NA BE762660 Out-of-frame Inter-chr p13.31 p36.11 117963 ChimerSeq ChiTaRs ChiTaRs GLTSCR2-GLTSCR2 GLTSCR2 chr19 48258650 GLTSCR2 chr19 48254276 Exonic hg19 NA AI906051 Out-of-frame Intra-chr Tumor suppressor gene Tumor suppressor gene 117964 ChimerSeq ChiTaRs ChiTaRs JUP-ECHS1 JUP chr17 39767921 ECHS1 chr10 135176370 Exonic hg19 NA CV337393 Out-of-frame Inter-chr q21.2 Tumor suppressor gene q26.3 117965 ChimerSeq ChiTaRs ChiTaRs MYH9-RAPGEF1 MYH9 chr22 36682838 RAPGEF1 chr9 134464340 Exonic hg19 NA BF988974 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene q34.13 117966 ChimerSeq ChiTaRs ChiTaRs NOP56-SLC44A2 NOP56 chr20 2637340 SLC44A2 chr19 10713131 Exonic hg19 NA DA801918 Out-of-frame Inter-chr p13 p13.2 117967 ChimerSeq ChiTaRs ChiTaRs RPL23A-UBC RPL23A chr17 27047633 UBC chr12 125397790 Exonic hg19 NA DB117326 Out-of-frame Inter-chr q11.2 q24.31 117968 ChimerSeq ChiTaRs ChiTaRs MON2-TMEM132B MON2 chr12 62861100 TMEM132B chr12 126128620 Exonic hg19 NA DA366951 Out-of-frame Intra-chr q14.1 q24.31 117969 ChimerSeq ChiTaRs ChiTaRs ARHGEF17-ARHGEF17 ARHGEF17 chr11 73080136 ARHGEF17 chr11 73079958 Exonic hg19 NA AI677651 Out-of-frame Intra-chr q13.4 q13.4 117970 ChimerSeq ChiTaRs ChiTaRs COX4I1-NOP16 COX4I1 chr16 85839470 NOP16 chr5 175812259 Exonic hg19 NA BI740287 In-Frame Inter-chr q24.1 q35.2 117971 ChimerSeq ChiTaRs ChiTaRs DECR2-UBA1 DECR2 chr16 451991 UBA1 chrX 47070299 Exonic hg19 NA DA633362 Out-of-frame Inter-chr p11.3 117972 ChimerSeq ChiTaRs ChiTaRs LSM4-LSM4 LSM4 chr19 18417887 LSM4 chr19 18417897 Exonic hg19 NA BU623973 Out-of-frame Intra-chr p13.11 p13.11 117973 ChimerSeq ChiTaRs ChiTaRs HSPH1-HSPH1 HSPH1 chr13 31711216 HSPH1 chr13 31711098 Exonic hg19 NA BQ431272 Out-of-frame Intra-chr q12.3 q12.3 117974 ChimerSeq ChiTaRs ChiTaRs MLL-MLL MLL chr11 118350944 MLL chr11 118352599 Exonic hg19 NA AF272382 Out-of-frame Intra-chr q23.3 q23.3 117975 ChimerSeq ChiTaRs ChiTaRs CBFB-NDE1 CBFB chr16 67116231 NDE1 chr16 15818614 Exonic hg19 NA AF202996 Out-of-frame Intra-chr q22.1 p13.11 117976 ChimerSeq ChiTaRs ChiTaRs PRMT7-QKI PRMT7 chr16 68349718 QKI chr6 163985772 Exonic hg19 NA BF821829 Out-of-frame Inter-chr q22.1 q26 117977 ChimerSeq ChiTaRs ChiTaRs SAP18-ILF2 SAP18 chr13 21721410 ILF2 chr1 153640989 Exonic hg19 NA DB116654 Out-of-frame Inter-chr q12.11 q21.3 117978 ChimerSeq ChiTaRs ChiTaRs SLC9A3R1-VASH2 SLC9A3R1 chr17 72759659 VASH2 chr1 213151410 Exonic hg19 NA BF746841 Out-of-frame Inter-chr q25.1 Tumor suppressor gene q32.3 117979 ChimerSeq ChiTaRs ChiTaRs FERMT2-NPM1 FERMT2 chr14 53331543 NPM1 chr5 170837756 Exonic hg19 NA N88349 Out-of-frame Inter-chr q22.1 q35.1 Oncogene Tumor suppressor gene 117980 ChimerSeq ChiTaRs ChiTaRs PCF11-PCF11 PCF11 chr11 82896825 PCF11 chr11 82896644 Exonic hg19 NA BQ048986 Out-of-frame Intra-chr q14.1 q14.1 117981 ChimerSeq ChiTaRs ChiTaRs CREBBP-KAT6B CREBBP chr16 3929942 KAT6B chr10 76788245 Exonic hg19 NA AJ299262 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene Oncogene KB 117982 ChimerSeq ChiTaRs ChiTaRs ITGA7-ITGA7 ITGA7 chr12 56079032 ITGA7 chr12 56078888 Exonic hg19 NA AA935778 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 Tumor suppressor gene 117983 ChimerSeq ChiTaRs ChiTaRs ADCY9-BGN ADCY9 chr16 4099111 BGN chrX 152774633 Exonic hg19 NA BF871520 Out-of-frame Inter-chr p13.3 q28 117984 ChimerSeq ChiTaRs ChiTaRs SETD4-ANKRD17 SETD4 chr21 37443269 ANKRD17 chr4 73956446 Exonic hg19 NA DB034419 Out-of-frame Inter-chr q22.12 q13.3 117985 ChimerSeq ChiTaRs ChiTaRs DHX58-DIP2C DHX58 chr17 40260058 DIP2C chr10 445071 Exonic hg19 NA BM174932 Out-of-frame Inter-chr q21.2 p15.3 117986 ChimerSeq ChiTaRs ChiTaRs C17orf76-AS1-MEIS1 C17orf76-AS1 chr17 16342730 MEIS1 chr2 66739280 Exonic hg19 NA DA907043 Out-of-frame Inter-chr p14 Tumor suppressor gene 117987 ChimerSeq ChiTaRs ChiTaRs HDGFRP3-HDGFRP3 HDGFRP3 chr15 83876381 HDGFRP3 chr15 83826660 Exonic hg19 NA AI342744 Out-of-frame Intra-chr 117988 ChimerSeq ChiTaRs ChiTaRs C21orf33-TAZ C21orf33 chr21 45565579 TAZ chrX 153649922 Exonic hg19 NA AW375494 Out-of-frame Inter-chr q22.3 q28 117989 ChimerSeq ChiTaRs ChiTaRs CFL1-ZC3H12A CFL1 chr11 65623661 ZC3H12A chr1 37945900 Exonic hg19 NA BE829996 Out-of-frame Inter-chr q13.1 p34.3 117990 ChimerSeq ChiTaRs ChiTaRs FERMT2-SMG8 FERMT2 chr14 53331277 SMG8 chr17 57288616 Exonic hg19 NA BQ366984 Out-of-frame Inter-chr q22.1 q22 117991 ChimerSeq ChiTaRs ChiTaRs RPL27-NME2 RPL27 chr17 41150848 NME2 chr17 49245608 Exonic hg19 NA EC440105 In-Frame Intra-chr q21.31 q21.33 Transcription factor 117992 ChimerSeq ChiTaRs ChiTaRs DIDO1-BSPRY DIDO1 chr20 61541185 BSPRY chr9 116132379 Exonic hg19 NA BE078256 Out-of-frame Inter-chr q13.33 Tumor suppressor gene q32 117993 ChimerSeq ChiTaRs ChiTaRs CTIF-TIMP2 CTIF chr18 46190452 TIMP2 chr17 76849680 Exonic hg19 NA BE008175 Out-of-frame Inter-chr q25.3 117994 ChimerSeq ChiTaRs ChiTaRs MMP7-MMP7 MMP7 chr11 102398354 MMP7 chr11 102401415 Exonic hg19 NA BF081442 Out-of-frame Intra-chr q22.2 q22.2 117995 ChimerSeq ChiTaRs ChiTaRs PCBP2-CDK11B PCBP2 chr12 53848593 CDK11B chr1 1573226 Exonic hg19 NA BE378162 Out-of-frame Inter-chr q13.13 p36.33 117996 ChimerSeq ChiTaRs ChiTaRs GOLGA3-PIK3R5 GOLGA3 chr12 133381354 PIK3R5 chr17 8847922 Exonic hg19 NA BF902971 Out-of-frame Inter-chr q24.33 p13.1 117997 ChimerSeq ChiTaRs ChiTaRs BANP-RHOD BANP chr16 88066851 RHOD chr11 66824410 Exonic hg19 NA BG015853 Out-of-frame Inter-chr q24.2 Tumor suppressor gene q13.2 117998 ChimerSeq ChiTaRs ChiTaRs POLR2E-POLR2E POLR2E chr19 1093828 POLR2E chr19 1093934 Exonic hg19 NA BQ362075 Out-of-frame Intra-chr p13.3 p13.3 117999 ChimerSeq ChiTaRs ChiTaRs THUMPD1-HERC4 THUMPD1 chr16 20753139 HERC4 chr10 69716680 Exonic hg19 NA DB217724 Out-of-frame Inter-chr p12.3 q21.3 118000 ChimerSeq ChiTaRs ChiTaRs TBC1D22A-TSPAN4 TBC1D22A chr22 47158616 TSPAN4 chr11 859367 Exonic hg19 NA DB260885 Out-of-frame Inter-chr q13.31 p15.5 118001 ChimerSeq ChiTaRs ChiTaRs MAPK8IP3-ANTXR1 MAPK8IP3 chr16 1817516 ANTXR1 chr2 69350190 Exonic hg19 NA BQ363789 Out-of-frame Inter-chr p13.3 p13.3 118002 ChimerSeq ChiTaRs ChiTaRs C16orf74-SLPI C16orf74 chr16 85759593 SLPI chr20 43881039 Exonic hg19 NA BI063065 Out-of-frame Inter-chr q24.1 q13.12 118003 ChimerSeq ChiTaRs ChiTaRs JUP-JUP JUP chr17 39914039 JUP chr17 39911397 Exonic hg19 NA BI058841 Out-of-frame Intra-chr q21.2 Tumor suppressor gene q21.2 Tumor suppressor gene 118004 ChimerSeq ChiTaRs ChiTaRs CREBBP-KAT6A CREBBP chr16 3929942 KAT6A chr8 41792267 Exonic hg19 NA AJ251845 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene p11.21 Oncogene KB Pub 118005 ChimerSeq ChiTaRs ChiTaRs GRIN2A-GRIN2A GRIN2A chr16 9857658 GRIN2A chr16 10032166 Exonic hg19 NA BP251842 Out-of-frame Intra-chr p13.2 Tumor suppressor gene p13.2 Tumor suppressor gene 118006 ChimerSeq ChiTaRs ChiTaRs CAPN1-CAPN1 CAPN1 chr11 64950987 CAPN1 chr11 64951036 Exonic hg19 NA BI023940 Out-of-frame Intra-chr q13.1 q13.1 118007 ChimerSeq ChiTaRs ChiTaRs COLEC12-COLEC12 COLEC12 chr18 346696 COLEC12 chr18 321777 Exonic hg19 NA BE929813 Out-of-frame Intra-chr p11.32 p11.32 118008 ChimerSeq ChiTaRs ChiTaRs CLEC18A-LOC283922 CLEC18A chr16 70190594 LOC283922 chr16 74401491 Exonic hg19 NA BF904585 Out-of-frame Intra-chr q22.1 118009 ChimerSeq ChiTaRs ChiTaRs SHISA6-HDHD2 SHISA6 chr17 11177527 HDHD2 chr18 44656613 Exonic hg19 NA BE771617 Out-of-frame Inter-chr p12 q21.1 118010 ChimerSeq ChiTaRs ChiTaRs OGFR-OGFR OGFR chr20 61443833 OGFR chr20 61438884 Exonic hg19 NA CN483432 Out-of-frame Intra-chr q13.33 q13.33 118011 ChimerSeq ChiTaRs ChiTaRs CMTM3-UBE2J2 CMTM3 chr16 66647283 UBE2J2 chr1 1190594 Exonic hg19 NA AA425266 Out-of-frame Inter-chr q22.1 Tumor suppressor gene p36.33 118012 ChimerSeq ChiTaRs ChiTaRs SLC44A2-DST SLC44A2 chr19 10754737 DST chr6 56323139 Exonic hg19 NA BE765019 Out-of-frame Inter-chr p13.2 p12.1 Oncogene 118013 ChimerSeq ChiTaRs ChiTaRs TFF3-TFF3 TFF3 chr21 43733726 TFF3 chr21 43732270 Exonic hg19 NA BG959789 Out-of-frame Intra-chr q22.3 q22.3 118014 ChimerSeq ChiTaRs ChiTaRs SMARCA4-SMARCA4 SMARCA4 chr19 11121196 SMARCA4 chr19 11113752 Exonic hg19 NA BF154565 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Oncogene Tumor suppressor gene 118015 ChimerSeq ChiTaRs ChiTaRs MLL-MLL MLL chr11 118360593 MLL chr11 118352599 Exonic hg19 NA AF272381 Out-of-frame Intra-chr q23.3 q23.3 118016 ChimerSeq ChiTaRs ChiTaRs RPL13A-GTF2IP1 RPL13A chr19 49993805 GTF2IP1 chr7 74601404 Exonic hg19 NA EC557264 Out-of-frame Inter-chr q13.33 q11.23 118017 ChimerSeq ChiTaRs ChiTaRs BRD4-BRD4 BRD4 chr19 15367867 BRD4 chr19 15348844 Exonic hg19 NA AI953280 Out-of-frame Intra-chr p13.12 Atypical:BRD p13.12 Atypical:BRD 118018 ChimerSeq ChiTaRs ChiTaRs ZNF550-ISG20L2 ZNF550 chr19 58071202 ISG20L2 chr1 156696797 Exonic hg19 NA BQ313646 Out-of-frame Inter-chr q13.43 Transcription factor q23.1 118019 ChimerSeq ChiTaRs ChiTaRs SF3B2-PRCC SF3B2 chr11 65827298 PRCC chr1 156756641 Exonic hg19 NA BE089930 Out-of-frame Inter-chr q13.1 q23.1 118020 ChimerSeq ChiTaRs ChiTaRs CD63-PUM1 CD63 chr12 56120031 PUM1 chr1 31437706 Exonic hg19 NA BF814941 Out-of-frame Inter-chr q13.2 p35.2 118021 ChimerSeq ChiTaRs ChiTaRs EEF2-SLC25A10 EEF2 chr19 3985461 SLC25A10 chr17 79679488 Exonic hg19 NA DA998089 5'UTR-CDS Inter-chr p13.3 q25.3 118022 ChimerSeq ChiTaRs ChiTaRs BOLA2-BOLA2 BOLA2 chr16 30080897 BOLA2 chr16 30080290 Exonic hg19 NA BG991500 Out-of-frame Intra-chr p11.2 p11.2 118023 ChimerSeq ChiTaRs ChiTaRs ARHGAP17-NFIC ARHGAP17 chr16 24942686 NFIC chr19 3452479 Exonic hg19 NA BF946375 In-Frame Inter-chr p12.1 p13.3 Transcription factor 118024 ChimerSeq ChiTaRs ChiTaRs N4BP2L2-N4BP2L2 N4BP2L2 chr13 33101671 N4BP2L2 chr13 33091994 Exonic hg19 NA BQ331268 Out-of-frame Intra-chr q13.1 q13.1 118025 ChimerSeq ChiTaRs ChiTaRs C17orf85-LRPAP1 C17orf85 chr17 3715747 LRPAP1 chr4 3517855 Exonic hg19 NA AA972645 Out-of-frame Inter-chr p16.3 118026 ChimerSeq ChiTaRs ChiTaRs COL1A1-COL1A1 COL1A1 chr17 48276624 COL1A1 chr17 48274546 Exonic hg19 NA AA852533 Out-of-frame Intra-chr q21.33 Oncogene q21.33 Oncogene 118027 ChimerSeq ChiTaRs ChiTaRs TMC4-GTF3C5 TMC4 chr19 54673363 GTF3C5 chr9 135933745 Exonic hg19 NA BE707838 Out-of-frame Inter-chr q34.13 118028 ChimerSeq ChiTaRs ChiTaRs BCAR1-BCAR1 BCAR1 chr16 75267763 BCAR1 chr16 75269530 Exonic hg19 NA CN484144 Out-of-frame Intra-chr q23.1 q23.1 118029 ChimerSeq ChiTaRs ChiTaRs HGS-SIGIRR HGS chr17 79657281 SIGIRR chr11 407854 Exonic hg19 NA BF509241 Out-of-frame Inter-chr q25.3 p15.5 118030 ChimerSeq ChiTaRs ChiTaRs PRR5-RAB14 PRR5 chr22 45133561 RAB14 chr9 123963949 Exonic hg19 NA AW452770 3'UTR-5'UTR Inter-chr q13.31 Tumor suppressor gene q33.2 118031 ChimerSeq ChiTaRs ChiTaRs NPRL3-NPRL3 NPRL3 chr16 139827 NPRL3 chr16 142669 Exonic hg19 NA EL583700 Out-of-frame Intra-chr p13.3 p13.3 118032 ChimerSeq ChiTaRs ChiTaRs ENGASE-COL5A2 ENGASE chr17 77078211 COL5A2 chr2 189898719 Exonic hg19 NA BE695574 Out-of-frame Inter-chr q25.3 q32.2 118033 ChimerSeq ChiTaRs ChiTaRs CIRBP-AS1-ITPK1 CIRBP-AS1 chr19 1440493 ITPK1 chr14 93428951 Exonic hg19 NA AI075181 Out-of-frame Inter-chr p13.3 Tumor suppressor gene 118034 ChimerSeq ChiTaRs ChiTaRs EIF6-EIF6 EIF6 chr20 33867465 EIF6 chr20 33866735 Exonic hg19 NA BG951220 Out-of-frame Intra-chr q11.22 q11.22 118035 ChimerSeq ChiTaRs ChiTaRs CCDC137-CCDC137 CCDC137 chr17 79637464 CCDC137 chr17 79639653 Exonic hg19 NA BE464127 Out-of-frame Intra-chr q25.3 q25.3 118036 ChimerSeq ChiTaRs ChiTaRs HNRNPL-HNRNPL HNRNPL chr19 39333513 HNRNPL chr19 39333330 Exonic hg19 NA BQ343301 Out-of-frame Intra-chr 118037 ChimerSeq ChiTaRs ChiTaRs PSMC5-PER1 PSMC5 chr17 61908827 PER1 chr17 8043855 Exonic hg19 NA BF948995 Out-of-frame Intra-chr q23.3 p13.1 Oncogene 118038 ChimerSeq ChiTaRs ChiTaRs GCNT3-HSP90B1 GCNT3 chr15 59911275 HSP90B1 chr12 104336852 Exonic hg19 NA AW842590 Out-of-frame Inter-chr q22.2 q23.3 Tumor suppressor gene 118039 ChimerSeq ChiTaRs ChiTaRs BOLA2-BOLA2 BOLA2 chr16 30094793 BOLA2 chr16 30094067 Exonic hg19 NA CV321680 Out-of-frame Intra-chr p11.2 p11.2 118040 ChimerSeq ChiTaRs ChiTaRs MYO1E-USP54 MYO1E chr15 59445928 USP54 chr10 75257405 Exonic hg19 NA BF154692 Out-of-frame Inter-chr q22.2 q22.2 118041 ChimerSeq ChiTaRs ChiTaRs TRAFD1-TRAFD1 TRAFD1 chr12 112591318 TRAFD1 chr12 112591303 Exonic hg19 NA CN277025 Out-of-frame Intra-chr q24.13 Transcription factor q24.13 Transcription factor 118042 ChimerSeq ChiTaRs ChiTaRs NEAT1-NEAT1 NEAT1 chr11 65205678 NEAT1 chr11 65205522 Exonic hg19 NA BF875609 Out-of-frame Intra-chr q13.1 q13.1 118043 ChimerSeq ChiTaRs ChiTaRs ABHD4-TSPYL2 ABHD4 chr14 23081051 TSPYL2 chrX 53112193 Exonic hg19 NA BF944008 Out-of-frame Inter-chr q11.2 p11.22 118044 ChimerSeq ChiTaRs ChiTaRs SBF1-MYLPF SBF1 chr22 50903560 MYLPF chr16 30386151 Exonic hg19 NA BF827890 Out-of-frame Inter-chr q13.33 p11.2 118045 ChimerSeq ChiTaRs ChiTaRs ATP5A1-ATP5A1 ATP5A1 chr18 43667066 ATP5A1 chr18 43668157 Exonic hg19 NA BQ640716 Out-of-frame Intra-chr q21.1 q21.1 118046 ChimerSeq ChiTaRs ChiTaRs IFNAR2-TNK2 IFNAR2 chr21 34636782 TNK2 chr3 195611713 Exonic hg19 NA BF926990 Out-of-frame Inter-chr q22.11 q29 Oncogene 118047 ChimerSeq ChiTaRs ChiTaRs FOS-MAST2 FOS chr14 75747698 MAST2 chr1 46496700 Exonic hg19 NA BF904848 Out-of-frame Inter-chr q24.3 Transcription factor p34.1 AGC:MAST 118048 ChimerSeq ChiTaRs ChiTaRs LTBP4-LTBP4 LTBP4 chr19 41129887 LTBP4 chr19 41135526 Exonic hg19 NA AA993262 Out-of-frame Intra-chr q13.2 q13.2 118049 ChimerSeq ChiTaRs ChiTaRs COL1A1-COL1A1 COL1A1 chr17 48262208 COL1A1 chr17 48262639 Exonic hg19 NA BM314078 Out-of-frame Intra-chr q21.33 Oncogene q21.33 Oncogene 118050 ChimerSeq ChiTaRs ChiTaRs TCL1A-VPS8 TCL1A chr14 96180448 VPS8 chr3 184708714 Exonic hg19 NA X82240 Out-of-frame Inter-chr q32.13 Oncogene q27.2 118051 ChimerSeq ChiTaRs ChiTaRs FBRS-CLCN7 FBRS chr16 30678288 CLCN7 chr16 1502838 Exonic hg19 NA BI029230 Out-of-frame Intra-chr p11.2 p13.3 118052 ChimerSeq ChiTaRs ChiTaRs TAPBPL-ARHGAP21 TAPBPL chr12 6571461 ARHGAP21 chr10 24874709 Exonic hg19 NA AA863096 Out-of-frame Inter-chr p13.31 p12.1 118053 ChimerSeq ChiTaRs ChiTaRs SLFN11-CPE SLFN11 chr17 33680157 CPE chr4 166385720 Exonic hg19 NA BF935865 Out-of-frame Inter-chr q12 q32.3 118054 ChimerSeq ChiTaRs ChiTaRs INSR-NRXN2 INSR chr19 7225864 NRXN2 chr11 64424470 Exonic hg19 NA BQ371811 Out-of-frame Inter-chr p13.2 TK:InsR q13.1 118055 ChimerSeq ChiTaRs ChiTaRs RPL18-KCNIP1 RPL18 chr19 49119190 KCNIP1 chr5 169873411 Exonic hg19 NA BG911000 Out-of-frame Inter-chr q13.33 q35.1 118056 ChimerSeq ChiTaRs ChiTaRs CALM1-MINK1 CALM1 chr14 90863532 MINK1 chr17 4791027 Exonic hg19 NA BF898266 Out-of-frame Inter-chr q32.11 p13.2 118057 ChimerSeq ChiTaRs ChiTaRs SERPINA1-AGXT2 SERPINA1 chr14 94849230 AGXT2 chr5 35013072 Exonic hg19 NA AF121182 Out-of-frame Inter-chr q32.13 p13.2 118058 ChimerSeq ChiTaRs ChiTaRs TSC22D1-TSC22D1 TSC22D1 chr13 45150622 TSC22D1 chr13 45149818 Exonic hg19 NA BX641351 Out-of-frame Intra-chr q14.11 Tumor suppressor gene Transcription factor q14.11 Tumor suppressor gene Transcription factor 118059 ChimerSeq ChiTaRs ChiTaRs CBFA2T3-BLOC1S1 CBFA2T3 chr16 88986873 BLOC1S1 chr12 56113384 Exonic hg19 NA BQ013058 Out-of-frame Inter-chr q24.3 Tumor suppressor gene q13.2 118060 ChimerSeq ChiTaRs ChiTaRs HIF1A-PRKCH HIF1A chr14 62162558 PRKCH chr14 61952220 Exonic hg19 NA DB202604 Out-of-frame Intra-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q23.1 Seq+ 118061 ChimerSeq ChiTaRs ChiTaRs MYH9-NUCB1 MYH9 chr22 36698678 NUCB1 chr19 49416756 Exonic hg19 NA BI028084 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene q13.33 118062 ChimerSeq ChiTaRs ChiTaRs ANP32A-ANKRD12 ANP32A chr15 69076924 ANKRD12 chr18 9256041 Exonic hg19 NA AA634993 Out-of-frame Inter-chr q23 Tumor suppressor gene p11.22 118063 ChimerSeq ChiTaRs ChiTaRs MLLT6-TUBB MLLT6 chr17 36882712 TUBB chr6 2025350 Exonic hg19 NA EC448406 Out-of-frame Inter-chr q12 118064 ChimerSeq ChiTaRs ChiTaRs FUT5-ZFP36 FUT5 chr19 5894806 ZFP36 chr19 39898797 Exonic hg19 NA AI927524 Out-of-frame Intra-chr p13.3 q13.2 Tumor suppressor gene 118065 ChimerSeq ChiTaRs ChiTaRs KIAA1731-ARRB2 KIAA1731 chr11 93408820 ARRB2 chr17 4624647 Exonic hg19 NA CR984268 Out-of-frame Inter-chr p13.2 118066 ChimerSeq ChiTaRs ChiTaRs LYRM1-EP300 LYRM1 chr16 20927287 EP300 chr22 41574542 Exonic hg19 NA BE071569 Out-of-frame Inter-chr p12.3 q13.2 Oncogene 118067 ChimerSeq ChiTaRs ChiTaRs CYB5A-ST14 CYB5A chr18 71959190 ST14 chr11 130069994 Exonic hg19 NA BF155251 Out-of-frame Inter-chr q22.3 Tumor suppressor gene q24.3 118068 ChimerSeq ChiTaRs ChiTaRs SLPI-LRP1 SLPI chr20 43882334 LRP1 chr12 57585932 Exonic hg19 NA BE764728 Out-of-frame Inter-chr q13.12 q13.3 118069 ChimerSeq ChiTaRs ChiTaRs PIAS4-PIAS4 PIAS4 chr19 4029015 PIAS4 chr19 4033426 Exonic hg19 NA BF087616 Out-of-frame Intra-chr p13.3 p13.3 118070 ChimerSeq ChiTaRs ChiTaRs MESDC1-MESDC1 MESDC1 chr15 81293684 MESDC1 chr15 81293461 Exonic hg19 NA BI548744 Out-of-frame Intra-chr q25.1 q25.1 118071 ChimerSeq ChiTaRs ChiTaRs CNIH-NRXN3 CNIH chr14 54896785 NRXN3 chr14 80135497 Exonic hg19 NA BF357043 Out-of-frame Intra-chr q24.3 118072 ChimerSeq ChiTaRs ChiTaRs C1R-MYO9B C1R chr12 7188008 MYO9B chr19 17291776 Exonic hg19 NA BE829955 Out-of-frame Inter-chr p13.31 p13.11 118073 ChimerSeq ChiTaRs ChiTaRs DEXI-CELSR3 DEXI chr16 11035732 CELSR3 chr3 48673898 Exonic hg19 NA BM127436 Out-of-frame Inter-chr p13.13 p21.31 118074 ChimerSeq ChiTaRs ChiTaRs SMARCB1-SMARCB1 SMARCB1 chr22 24134003 SMARCB1 chr22 24159057 Exonic hg19 NA BE932597 Out-of-frame Intra-chr q11.23 Oncogene Tumor suppressor gene q11.23 Oncogene Tumor suppressor gene 118075 ChimerSeq ChiTaRs ChiTaRs SNRPN-SNRPN SNRPN chr15 25223391 SNRPN chr15 25220536 Exonic hg19 NA BI759879 Out-of-frame Intra-chr q11.2 q11.2 118076 ChimerSeq ChiTaRs ChiTaRs ADRBK1-TMEM177 ADRBK1 chr11 67046742 TMEM177 chr2 120443598 Exonic hg19 NA BG954410 Out-of-frame Inter-chr q14.2 118077 ChimerSeq ChiTaRs ChiTaRs CTDP1-TGFB1 CTDP1 chr18 77513810 TGFB1 chr19 41859399 Exonic hg19 NA BF765131 Out-of-frame Inter-chr q13.2 Tumor suppressor gene 118078 ChimerSeq ChiTaRs ChiTaRs PIGU-PIGU PIGU chr20 33148480 PIGU chr20 33148477 Exonic hg19 NA AA557668 Out-of-frame Intra-chr q11.22 q11.22 118079 ChimerSeq ChiTaRs ChiTaRs FGF11-FGF11 FGF11 chr17 7329746 FGF11 chr17 7329819 Exonic hg19 NA AW196894 Out-of-frame Intra-chr 118080 ChimerSeq ChiTaRs ChiTaRs SYMPK-SYMPK SYMPK chr19 46319844 SYMPK chr19 46327101 Exonic hg19 NA BF093762 Out-of-frame Intra-chr q13.32 q13.32 118081 ChimerSeq ChiTaRs ChiTaRs C11orf30-C11orf30 C11orf30 chr11 76183896 C11orf30 chr11 76174863 Exonic hg19 NA BF763397 Out-of-frame Intra-chr 118082 ChimerSeq ChiTaRs ChiTaRs UBTF-MYH9 UBTF chr17 42289083 MYH9 chr22 36697615 Exonic hg19 NA BG979531 Out-of-frame Inter-chr q21.31 q12.3 Oncogene Tumor suppressor gene 118083 ChimerSeq ChiTaRs ChiTaRs EXOC7-MYADM EXOC7 chr17 74084865 MYADM chr19 54377729 Exonic hg19 NA BE838171 Out-of-frame Inter-chr q25.1 q13.42 118084 ChimerSeq ChiTaRs ChiTaRs IGDCC3-TNRC18 IGDCC3 chr15 65622103 TNRC18 chr7 5432773 Exonic hg19 NA BE093173 Out-of-frame Inter-chr q22.31 p22.1 118085 ChimerSeq ChiTaRs ChiTaRs ACTG1-MYB ACTG1 chr17 79479311 MYB chr6 135513463 Exonic hg19 NA BE091998 Out-of-frame Inter-chr q25.3 q23.3 Oncogene Transcription factor 118086 ChimerSeq ChiTaRs ChiTaRs FLOT2-SLC23A2 FLOT2 chr17 27209407 SLC23A2 chr20 4943158 Exonic hg19 NA BF088490 Out-of-frame Inter-chr q11.2 p13 118087 ChimerSeq ChiTaRs ChiTaRs CRYBB2-FAH CRYBB2 chr22 25627836 FAH chr15 80464543 Exonic hg19 NA BU734913 3'UTR-CDS Inter-chr q11.23 q25.1 118088 ChimerSeq ChiTaRs ChiTaRs NUMBL-CBX6 NUMBL chr19 41172778 CBX6 chr22 39260360 Exonic hg19 NA BE221181 Out-of-frame Inter-chr q13.2 q13.1 118089 ChimerSeq ChiTaRs ChiTaRs DAAM1-IREB2 DAAM1 chr14 59655486 IREB2 chr15 78768528 Exonic hg19 NA DA502239 5'UTR-CDS Inter-chr q23.1 q25.1 118090 ChimerSeq ChiTaRs ChiTaRs NCOR2-OTUD5 NCOR2 chr12 124887000 OTUD5 chrX 48801477 Exonic hg19 NA BF803065 Out-of-frame Inter-chr q24.31 p11.23 118091 ChimerSeq ChiTaRs ChiTaRs IL4R-FCHO1 IL4R chr16 27357939 FCHO1 chr19 17893203 Exonic hg19 NA BF896822 Out-of-frame Inter-chr p12.1 p13.11 118092 ChimerSeq ChiTaRs ChiTaRs SHC4-RANGAP1 SHC4 chr15 49170450 RANGAP1 chr22 41641649 Exonic hg19 NA BE925437 Out-of-frame Inter-chr q21.1 q13.2 118093 ChimerSeq ChiTaRs ChiTaRs TRIM25-TRIM25 TRIM25 chr17 54970945 TRIM25 chr17 54970964 Exonic hg19 NA BF379232 Out-of-frame Intra-chr q22 q22 118094 ChimerSeq ChiTaRs ChiTaRs CKAP4-CKAP4 CKAP4 chr12 106641775 CKAP4 chr12 106641551 Exonic hg19 NA AI056664 Out-of-frame Intra-chr q23.3 q23.3 118095 ChimerSeq ChiTaRs ChiTaRs CYTH1-SYT1 CYTH1 chr17 76719646 SYT1 chr12 79679677 Exonic hg19 NA DA094310 Out-of-frame Inter-chr q25.3 q21.2 118096 ChimerSeq ChiTaRs ChiTaRs KRT13-KRT13 KRT13 chr17 39659624 KRT13 chr17 39658995 Exonic hg19 NA CV318384 Out-of-frame Intra-chr q21.2 q21.2 118097 ChimerSeq ChiTaRs ChiTaRs PTPRA-PTPRA PTPRA chr20 2944995 PTPRA chr20 2945718 Exonic hg19 NA BE933359 Out-of-frame Intra-chr p13 p13 118098 ChimerSeq ChiTaRs ChiTaRs APP-APP APP chr21 27277358 APP chr21 27542909 Exonic hg19 NA M35675 Out-of-frame Intra-chr q21.3 q21.3 118099 ChimerSeq ChiTaRs ChiTaRs FBLN1-FBLN1 FBLN1 chr22 45931152 FBLN1 chr22 45931135 Exonic hg19 NA BG827383 Out-of-frame Intra-chr q13.31 Tumor suppressor gene q13.31 Tumor suppressor gene 118100 ChimerSeq ChiTaRs ChiTaRs PTMS-MYH9 PTMS chr12 6880074 MYH9 chr22 36691078 Exonic hg19 NA AA586758 Out-of-frame Inter-chr p13.31 q12.3 Oncogene Tumor suppressor gene 118101 ChimerSeq ChiTaRs ChiTaRs CACNA1G-CDK18 CACNA1G chr17 48703210 CDK18 chr1 205500864 Exonic hg19 NA BF928811 Out-of-frame Inter-chr q21.33 q32.1 118102 ChimerSeq ChiTaRs ChiTaRs CACNA1H-CACNA1H CACNA1H chr16 1271474 CACNA1H chr16 1271296 Exonic hg19 NA AW881528 Out-of-frame Intra-chr p13.3 p13.3 118103 ChimerSeq ChiTaRs ChiTaRs SF3B2-PRCC SF3B2 chr11 65827297 PRCC chr1 156756641 Exonic hg19 NA BE089937 Out-of-frame Inter-chr q13.1 q23.1 118104 ChimerSeq ChiTaRs ChiTaRs ING1-ING1 ING1 chr13 111372146 ING1 chr13 111371929 Exonic hg19 NA BQ306241 Out-of-frame Intra-chr q34 Tumor suppressor gene q34 Tumor suppressor gene 118105 ChimerSeq ChiTaRs ChiTaRs ACTN1-ACTN1 ACTN1 chr14 69341632 ACTN1 chr14 69341611 Exonic hg19 NA BE762312 Out-of-frame Intra-chr q24.1 q24.1 118106 ChimerSeq ChiTaRs ChiTaRs EML2-TRAF4 EML2 chr19 46124868 TRAF4 chr17 27072206 Exonic hg19 NA BF852696 Out-of-frame Inter-chr q13.32 q11.2 118107 ChimerSeq ChiTaRs ChiTaRs DICER1-NEK7 DICER1 chr14 95556396 NEK7 chr1 198240801 Exonic hg19 NA AA248769 Out-of-frame Inter-chr q32.13 Oncogene Tumor suppressor gene q31.3 Other:NEK 118108 ChimerSeq ChiTaRs ChiTaRs CHD8-CHD8 CHD8 chr14 21868193 CHD8 chr14 21862439 Exonic hg19 NA BF083325 Out-of-frame Intra-chr q11.2 q11.2 118109 ChimerSeq ChiTaRs ChiTaRs NPIPB7-NPIPB7 NPIPB7 chr16 28834650 NPIPB7 chr16 28846477 Exonic hg19 NA AW593152 Out-of-frame Intra-chr p12.1 p12.1 118110 ChimerSeq ChiTaRs ChiTaRs KRT5-KRT5 KRT5 chr12 52912850 KRT5 chr12 52913521 Exonic hg19 NA CV372501 Out-of-frame Intra-chr q13.13 q13.13 118111 ChimerSeq ChiTaRs ChiTaRs PDIA3-AARS PDIA3 chr15 44057718 AARS chr16 70299496 Exonic hg19 NA BF818281 Out-of-frame Inter-chr q15.3 q22.1 118112 ChimerSeq ChiTaRs ChiTaRs SLC44A2-VCL SLC44A2 chr19 10748738 VCL chr10 75878537 Exonic hg19 NA BE068966 Out-of-frame Inter-chr p13.2 q22.2 118113 ChimerSeq ChiTaRs ChiTaRs SRC-GPR160 SRC chr20 36022607 GPR160 chr3 169792303 Exonic hg19 NA AA523427 Out-of-frame Inter-chr q11.23 TK:Src Oncogene q26.2 118114 ChimerSeq ChiTaRs ChiTaRs LOC440335-ARFIP2 LOC440335 chr16 4845986 ARFIP2 chr11 6498227 Exonic hg19 NA AW799757 Out-of-frame Inter-chr p15.4 118115 ChimerSeq ChiTaRs ChiTaRs FUS-ADNP2 FUS chr16 31193986 ADNP2 chr18 77894318 Exonic hg19 NA CN361911 Out-of-frame Inter-chr p11.2 Tumor suppressor gene q23 Transcription factor 118116 ChimerSeq ChiTaRs ChiTaRs PTRF-PTRF PTRF chr17 40556396 PTRF chr17 40555300 Exonic hg19 NA BE925585 Out-of-frame Intra-chr 118117 ChimerSeq ChiTaRs ChiTaRs LAMA3-LAMA3 LAMA3 chr18 21519266 LAMA3 chr18 21519266 Exonic hg19 NA AA143453 Out-of-frame Intra-chr q11.2 q11.2 118118 ChimerSeq ChiTaRs ChiTaRs PPP1R12A-PPP1R12A PPP1R12A chr12 80182501 PPP1R12A chr12 80169740 Exonic hg19 NA AA715976 Out-of-frame Intra-chr q21.31 q21.31 118119 ChimerSeq ChiTaRs ChiTaRs RMI2-USP22 RMI2 chr16 11369571 USP22 chr17 20904046 Exonic hg19 NA AI082273 Out-of-frame Inter-chr p13.13 p11.2 118120 ChimerSeq ChiTaRs ChiTaRs COPE-GNPTG COPE chr19 19010482 GNPTG chr16 1412611 Exonic hg19 NA AI800313 3'UTR-CDS Inter-chr p13.11 p13.3 118121 ChimerSeq ChiTaRs ChiTaRs MCRS1-MCRS1 MCRS1 chr12 49952496 MCRS1 chr12 49952502 Exonic hg19 NA AW878083 Out-of-frame Intra-chr q13.12 q13.12 118122 ChimerSeq ChiTaRs ChiTaRs ATF7IP-ATF7IP ATF7IP chr12 14619524 ATF7IP chr12 14609492 Exonic hg19 NA BI035269 Out-of-frame Intra-chr p13.1 p13.1 118123 ChimerSeq ChiTaRs ChiTaRs KCNK15-KCNK15 KCNK15 chr20 43374627 KCNK15 chr20 43374747 Exonic hg19 NA AI968607 Out-of-frame Intra-chr q13.12 q13.12 118124 ChimerSeq ChiTaRs ChiTaRs NOB1-OXNAD1 NOB1 chr16 69776505 OXNAD1 chr3 16358253 Exonic hg19 NA AW376214 Out-of-frame Inter-chr q22.1 p25.1 118125 ChimerSeq ChiTaRs ChiTaRs ZNF626-ADI1 ZNF626 chr19 20844339 ADI1 chr2 3504625 Exonic hg19 NA AA351447 Out-of-frame Inter-chr p12 Transcription factor 118126 ChimerSeq ChiTaRs ChiTaRs TELO2-TELO2 TELO2 chr16 1552664 TELO2 chr16 1552673 Exonic hg19 NA BF844011 Out-of-frame Intra-chr p13.3 p13.3 118127 ChimerSeq ChiTaRs ChiTaRs PTPRA-LAMA5 PTPRA chr20 2989713 LAMA5 chr20 60884403 Exonic hg19 NA BQ694937 Out-of-frame Intra-chr p13 q13.33 118128 ChimerSeq ChiTaRs ChiTaRs MLL-LRRC57 MLL chr11 118352809 LRRC57 chr15 42839450 Exonic hg19 NA AF272377 Out-of-frame Inter-chr q23.3 q15.2 118129 ChimerSeq ChiTaRs ChiTaRs ZNFX1-MPO ZNFX1 chr20 47888133 MPO chr17 56355249 Exonic hg19 NA BQ335856 Out-of-frame Inter-chr q13.13 q22 118130 ChimerSeq ChiTaRs ChiTaRs KCTD2-KCTD2 KCTD2 chr17 73059939 KCTD2 chr17 73059494 Exonic hg19 NA AW995639 Out-of-frame Intra-chr q25.1 q25.1 118131 ChimerSeq ChiTaRs ChiTaRs PDE4A-GPR108 PDE4A chr19 10578426 GPR108 chr19 6733130 Exonic hg19 NA AA428630 Out-of-frame Intra-chr p13.2 p13.3 118132 ChimerSeq ChiTaRs ChiTaRs FURIN-FURIN FURIN chr15 91420215 FURIN chr15 91419119 Exonic hg19 NA BF986802 Out-of-frame Intra-chr q26.1 q26.1 118133 ChimerSeq ChiTaRs ChiTaRs PAM16-TSPAN3 PAM16 chr16 4401294 TSPAN3 chr15 77346551 Exonic hg19 NA DA612149 Out-of-frame Inter-chr p13.3 q24.3 118134 ChimerSeq ChiTaRs ChiTaRs ERCC1-FBRSL1 ERCC1 chr19 45973952 FBRSL1 chr12 133100430 Exonic hg19 NA BG983612 Out-of-frame Inter-chr q13.32 Oncogene q24.33 118135 ChimerSeq ChiTaRs ChiTaRs ACTG1-MYB ACTG1 chr17 79479141 MYB chr6 135513461 Exonic hg19 NA BF332617 Out-of-frame Inter-chr q25.3 q23.3 Oncogene Transcription factor 118136 ChimerSeq ChiTaRs ChiTaRs COASY-PPAN COASY chr17 40718301 PPAN chr19 10220859 Exonic hg19 NA AI650663 Out-of-frame Inter-chr q21.2 p13.2 118137 ChimerSeq ChiTaRs ChiTaRs LAMA3-LAMA3 LAMA3 chr18 21500988 LAMA3 chr18 21494445 Exonic hg19 NA AW578494 Out-of-frame Intra-chr q11.2 q11.2 118138 ChimerSeq ChiTaRs ChiTaRs FOS-FOS FOS chr14 75748693 FOS chr14 75748498 Exonic hg19 NA BE710328 Out-of-frame Intra-chr q24.3 Transcription factor q24.3 Transcription factor 118139 ChimerSeq ChiTaRs ChiTaRs AHNAK2-AHNAK2 AHNAK2 chr14 105405060 AHNAK2 chr14 105405033 Exonic hg19 NA M61995 Out-of-frame Intra-chr q32.33 q32.33 118140 ChimerSeq ChiTaRs ChiTaRs COL1A1-COL1A1 COL1A1 chr17 48262944 COL1A1 chr17 48261972 Exonic hg19 NA AA968534 Out-of-frame Intra-chr q21.33 Oncogene q21.33 Oncogene 118141 ChimerSeq ChiTaRs ChiTaRs MYH14-MBD6 MYH14 chr19 50808617 MBD6 chr12 57923701 Exonic hg19 NA AW362416 Out-of-frame Inter-chr q13.33 q13.3 Transcription factor 118142 ChimerSeq ChiTaRs ChiTaRs KRI1-KRI1 KRI1 chr19 10673489 KRI1 chr19 10671695 Exonic hg19 NA BF336729 Out-of-frame Intra-chr p13.2 p13.2 118143 ChimerSeq ChiTaRs ChiTaRs BOLA2-BOLA2 BOLA2 chr16 29848211 BOLA2 chr16 29852948 Exonic hg19 NA BI058184 Out-of-frame Intra-chr p11.2 p11.2 118144 ChimerSeq ChiTaRs ChiTaRs PRKCA-SLC45A3 PRKCA chr17 64571947 SLC45A3 chr1 205633006 Exonic hg19 NA BF854872 Out-of-frame Inter-chr q24.2 q32.1 118145 ChimerSeq ChiTaRs ChiTaRs PC-SLC9A8 PC chr11 66625262 SLC9A8 chr20 48507827 Exonic hg19 NA AI015900 Out-of-frame Inter-chr q13.2 q13.13 118146 ChimerSeq ChiTaRs ChiTaRs ZNF787-POMT2 ZNF787 chr19 56611319 POMT2 chr14 77751311 Exonic hg19 NA BF871714 Out-of-frame Inter-chr q13.43 Transcription factor q24.3 118147 ChimerSeq ChiTaRs ChiTaRs MALAT1-GNA12 MALAT1 chr11 65268452 GNA12 chr7 2770715 Exonic hg19 NA BE063291 Out-of-frame Inter-chr q13.1 p22.2 118148 ChimerSeq ChiTaRs ChiTaRs ARIH1-OLFM1 ARIH1 chr15 72847654 OLFM1 chr9 137987765 Exonic hg19 NA DA779963 Out-of-frame Inter-chr q24.1 q34.3 118149 ChimerSeq ChiTaRs ChiTaRs KDM5A-TUBB4A KDM5A chr12 402297 TUBB4A chr19 6494726 Exonic hg19 NA CB146214 Out-of-frame Inter-chr p13.33 Tumor suppressor gene p13.3 118150 ChimerSeq ChiTaRs ChiTaRs BOLA2-DMPK BOLA2 chr16 29820907 DMPK chr19 46273763 Exonic hg19 NA BG992769 Out-of-frame Inter-chr p11.2 q13.32 118151 ChimerSeq ChiTaRs ChiTaRs PPP6R1-ZGLP1 PPP6R1 chr19 55769840 ZGLP1 chr19 10418948 Exonic hg19 NA BM756490 Out-of-frame Intra-chr q13.42 p13.2 Transcription factor 118152 ChimerSeq ChiTaRs ChiTaRs MYO19-MYO19 MYO19 chr17 34869020 MYO19 chr17 34868995 Exonic hg19 NA AA034425 Out-of-frame Intra-chr q12 q12 118153 ChimerSeq ChiTaRs ChiTaRs AP1M2-AP1M2 AP1M2 chr19 10689627 AP1M2 chr19 10685691 Exonic hg19 NA BF092383 Out-of-frame Intra-chr p13.2 p13.2 118154 ChimerSeq ChiTaRs ChiTaRs MAML2-RTKN MAML2 chr11 96045127 RTKN chr2 74654494 Exonic hg19 NA BG983415 Out-of-frame Inter-chr q21 Oncogene p13.1 118155 ChimerSeq ChiTaRs ChiTaRs RNF126-TSPAN4 RNF126 chr19 663183 TSPAN4 chr11 850287 Exonic hg19 NA CN274960 5'UTR-5'UTR Inter-chr p13.3 p15.5 118156 ChimerSeq ChiTaRs ChiTaRs KAT5-KAT5 KAT5 chr11 65482186 KAT5 chr11 65480241 Exonic hg19 NA CR735169 Out-of-frame Intra-chr q13.1 Tumor suppressor gene q13.1 Tumor suppressor gene 118157 ChimerSeq ChiTaRs ChiTaRs MIEN1-HNRPDL MIEN1 chr17 37885624 HNRPDL chr4 83346687 Exonic hg19 NA AA456091 Out-of-frame Inter-chr q12 118158 ChimerSeq ChiTaRs ChiTaRs TPGS1-CHRNA3 TPGS1 chr19 507571 CHRNA3 chr15 78893730 Exonic hg19 NA BF507699 Out-of-frame Inter-chr p13.3 q25.1 118159 ChimerSeq ChiTaRs ChiTaRs CTTN-KLRG2 CTTN chr11 70265934 KLRG2 chr7 139166718 Exonic hg19 NA AW367542 Out-of-frame Inter-chr q13.3 q34 118160 ChimerSeq ChiTaRs ChiTaRs LGALS3BP-LGALS3BP LGALS3BP chr17 76968444 LGALS3BP chr17 76968062 Exonic hg19 NA BI018035 Out-of-frame Intra-chr q25.3 q25.3 118161 ChimerSeq ChiTaRs ChiTaRs MIS18BP1-MIS18BP1 MIS18BP1 chr14 45693536 MIS18BP1 chr14 45696917 Exonic hg19 NA AA491377 Out-of-frame Intra-chr q21.2 q21.2 118162 ChimerSeq ChiTaRs ChiTaRs SLC7A6OS-SLC7A6OS SLC7A6OS chr16 68344835 SLC7A6OS chr16 68344326 Exonic hg19 NA CB122687 Out-of-frame Intra-chr q22.1 q22.1 118163 ChimerSeq ChiTaRs ChiTaRs C12orf66-KSR2 C12orf66 chr12 64587791 KSR2 chr12 118287864 Exonic hg19 NA BF962834 Out-of-frame Intra-chr q14.2 q24.23 TKL:RAF 118164 ChimerSeq ChiTaRs ChiTaRs ANKS1B-ANO4 ANKS1B chr12 99288529 ANO4 chr12 101472970 Exonic hg19 NA DA202206 5'UTR-CDS Intra-chr q23.1 q23.1 118165 ChimerSeq ChiTaRs ChiTaRs AES-ST3GAL1 AES chr19 3054215 ST3GAL1 chr8 134475787 Exonic hg19 NA BG005080 Out-of-frame Inter-chr p13.3 q24.22 118166 ChimerSeq ChiTaRs ChiTaRs UGGT2-UGGT2 UGGT2 chr13 96624915 UGGT2 chr13 96638665 Exonic hg19 NA CA335867 Out-of-frame Intra-chr q32.1 q32.1 118167 ChimerSeq ChiTaRs ChiTaRs CYBA-CYBA CYBA chr16 88713247 CYBA chr16 88713508 Exonic hg19 NA AW374327 Out-of-frame Intra-chr q24.2 q24.2 118168 ChimerSeq ChiTaRs ChiTaRs COL1A1-COL1A2 COL1A1 chr17 48266808 COL1A2 chr7 94056356 Exonic hg19 NA BQ369258 Out-of-frame Inter-chr q21.33 Oncogene q21.3 118169 ChimerSeq ChiTaRs ChiTaRs GOT2-HTT GOT2 chr16 58752593 HTT chr4 3209030 Exonic hg19 NA BQ337855 Out-of-frame Inter-chr q21 p16.3 118170 ChimerSeq ChiTaRs ChiTaRs FGF11-FGF11 FGF11 chr17 7329745 FGF11 chr17 7329786 Exonic hg19 NA AW293780 Out-of-frame Intra-chr 118171 ChimerSeq ChiTaRs ChiTaRs NSMCE1-ABCC1 NSMCE1 chr16 27280075 ABCC1 chr16 16205231 Exonic hg19 NA BE241792 5'UTR-CDS Intra-chr p12.1 118172 ChimerSeq ChiTaRs ChiTaRs CNN1-STX16 CNN1 chr19 11660603 STX16 chr20 57253063 Exonic hg19 NA AW376257 Out-of-frame Inter-chr p13.2 Tumor suppressor gene q13.32 118173 ChimerSeq ChiTaRs ChiTaRs SON-XPC SON chr21 34918561 XPC chr3 14211985 Exonic hg19 NA AV736879 Out-of-frame Inter-chr q22.11 Transcription factor p25.1 Oncogene 118174 ChimerSeq ChiTaRs ChiTaRs RNF213-SIT1 RNF213 chr17 78261757 SIT1 chr9 35650656 Exonic hg19 NA DB112751 Out-of-frame Inter-chr q25.3 Oncogene p13.3 118175 ChimerSeq ChiTaRs ChiTaRs NDE1-LRRC26 NDE1 chr16 15802691 LRRC26 chr9 140063360 Exonic hg19 NA BE855941 Out-of-frame Inter-chr p13.11 q34.3 118176 ChimerSeq ChiTaRs ChiTaRs SIN3A-SGCZ SIN3A chr15 75705295 SGCZ chr8 14912171 Exonic hg19 NA BI054950 Out-of-frame Inter-chr q24.2 p22 118177 ChimerSeq ChiTaRs ChiTaRs RALY-KPNB1 RALY chr20 32668067 KPNB1 chr17 45759788 Exonic hg19 NA AA738059 Out-of-frame Inter-chr q11.22 q21.32 118178 ChimerSeq ChiTaRs ChiTaRs YWHAB-YWHAB YWHAB chr20 43530402 YWHAB chr20 43530376 Exonic hg19 NA BQ302015 Out-of-frame Intra-chr q13.12 q13.12 118179 ChimerSeq ChiTaRs ChiTaRs HIF1A-ROMO1 HIF1A chr14 62207571 ROMO1 chr20 34288850 Exonic hg19 NA BE545257 Out-of-frame Inter-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q11.22 118180 ChimerSeq ChiTaRs ChiTaRs ZNF219-ZNF219 ZNF219 chr14 21560669 ZNF219 chr14 21559222 Exonic hg19 NA AI829676 Out-of-frame Intra-chr q11.2 Transcription factor q11.2 Transcription factor 118181 ChimerSeq ChiTaRs ChiTaRs HSP90B1-HSP90B1 HSP90B1 chr12 104335320 HSP90B1 chr12 104335294 Exonic hg19 NA BG256795 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene 118182 ChimerSeq ChiTaRs ChiTaRs FBLN1-FBLN1 FBLN1 chr22 45931133 FBLN1 chr22 45929014 Exonic hg19 NA BE931220 Out-of-frame Intra-chr q13.31 Tumor suppressor gene q13.31 Tumor suppressor gene 118183 ChimerSeq ChiTaRs ChiTaRs CHMP4B-RBPMS2 CHMP4B chr20 32441634 RBPMS2 chr15 65032795 Exonic hg19 NA AI653324 Out-of-frame Inter-chr q11.22 q22.31 118184 ChimerSeq ChiTaRs ChiTaRs PGS1-ZZEF1 PGS1 chr17 76417437 ZZEF1 chr17 3988975 Exonic hg19 NA BF333583 Out-of-frame Intra-chr q25.3 p13.2 118185 ChimerSeq ChiTaRs ChiTaRs AKAP1-KIAA1671 AKAP1 chr17 55183579 KIAA1671 chr22 25508113 Exonic hg19 NA AF015910 Out-of-frame Inter-chr q22 q11.23 118186 ChimerSeq ChiTaRs ChiTaRs TSKU-KDM5A TSKU chr11 76506776 KDM5A chr12 475099 Exonic hg19 NA DA455152 In-Frame Inter-chr q13.5 p13.33 Tumor suppressor gene 118187 ChimerSeq ChiTaRs ChiTaRs CCDC90B-TPRA1 CCDC90B chr11 82996947 TPRA1 chr3 127292529 Exonic hg19 NA BE703295 Out-of-frame Inter-chr q14.1 q21.3 118188 ChimerSeq ChiTaRs ChiTaRs YY1-YY1 YY1 chr14 100728789 YY1 chr14 100706095 Exonic hg19 NA BM924295 Out-of-frame Intra-chr q32.2 Transcription factor q32.2 Transcription factor 118189 ChimerSeq ChiTaRs ChiTaRs MYL12A-MYL12A MYL12A chr18 3247902 MYL12A chr18 3253286 Exonic hg19 NA BF895637 Out-of-frame Intra-chr p11.31 p11.31 118190 ChimerSeq ChiTaRs ChiTaRs CHMP4B-FBXO34 CHMP4B chr20 32440009 FBXO34 chr14 55766161 Exonic hg19 NA BU624572 CDS-5'UTR Inter-chr q11.22 q22.3 118191 ChimerSeq ChiTaRs ChiTaRs ANKRD12-ANKRD12 ANKRD12 chr18 9182509 ANKRD12 chr18 9221915 Exonic hg19 NA AU185692 Out-of-frame Intra-chr p11.22 p11.22 118192 ChimerSeq ChiTaRs ChiTaRs COL6A2-COL6A2 COL6A2 chr21 47532153 COL6A2 chr21 47532166 Exonic hg19 NA BF743759 Out-of-frame Intra-chr q22.3 q22.3 118193 ChimerSeq ChiTaRs ChiTaRs SEPT3-RALGAPA1 2003_ 9_ 1_ chr22 42390649 RALGAPA1 chr14 36007562 Exonic hg19 NA CB409577 Out-of-frame Inter-chr q13.2 118194 ChimerSeq ChiTaRs ChiTaRs MYH9-CHCHD3 MYH9 chr22 36690184 CHCHD3 chr7 132720429 Exonic hg19 NA BP288008 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene q33 Transcription factor 118195 ChimerSeq ChiTaRs ChiTaRs GPR137-GPR137 GPR137 chr11 64053557 GPR137 chr11 64053417 Exonic hg19 NA DA440013 Out-of-frame Intra-chr q13.1 q13.1 118196 ChimerSeq ChiTaRs ChiTaRs TCTN2-WNK1 TCTN2 chr12 124191379 WNK1 chr12 971395 Exonic hg19 NA BF931307 Out-of-frame Intra-chr q24.31 p13.33 118197 ChimerSeq ChiTaRs ChiTaRs ANKS1B-LPIN1 ANKS1B chr12 99166957 LPIN1 chr2 11944623 Exonic hg19 NA BF932023 In-Frame Inter-chr q23.1 p25.1 118198 ChimerSeq ChiTaRs ChiTaRs HSP90AA1-GNAI2 HSP90AA1 chr14 102549540 GNAI2 chr3 50296695 Exonic hg19 NA BM450613 Out-of-frame Inter-chr q32.31 Oncogene p21.31 118199 ChimerSeq ChiTaRs ChiTaRs C19orf6-MBOAT7 C19orf6 chr19 1012159 MBOAT7 chr19 54677826 Exonic hg19 NA BF877350 Out-of-frame Intra-chr 118200 ChimerSeq ChiTaRs ChiTaRs SUPT6H-SUPT6H SUPT6H chr17 27014171 SUPT6H chr17 27016537 Exonic hg19 NA BF853696 Out-of-frame Intra-chr q11.2 q11.2 118201 ChimerSeq ChiTaRs ChiTaRs TRMT2A-SRRM3 TRMT2A chr22 20104493 SRRM3 chr7 75877539 Exonic hg19 NA BC060318 Out-of-frame Inter-chr q11.21 q11.23 118202 ChimerSeq ChiTaRs ChiTaRs MYH9-MYH9 MYH9 chr22 36681954 MYH9 chr22 36678487 Exonic hg19 NA BF733247 Out-of-frame Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Oncogene Tumor suppressor gene 118203 ChimerSeq ChiTaRs ChiTaRs ABCA7-ABCA7 ABCA7 chr19 1058747 ABCA7 chr19 1058860 Exonic hg19 NA BI012955 Out-of-frame Intra-chr p13.3 p13.3 118204 ChimerSeq ChiTaRs ChiTaRs DAAM1-MFHAS1 DAAM1 chr14 59793689 MFHAS1 chr8 8643259 Exonic hg19 NA CF136777 Out-of-frame Inter-chr q23.1 p23.1 118205 ChimerSeq ChiTaRs ChiTaRs HSP90AA1-CALD1 HSP90AA1 chr14 102551702 CALD1 chr7 134552531 Exonic hg19 NA BU627563 Out-of-frame Inter-chr q32.31 Oncogene q33 118206 ChimerSeq ChiTaRs ChiTaRs AP1M2-DTD1 AP1M2 chr19 10697982 DTD1 chr20 18650681 Exonic hg19 NA AW998056 Out-of-frame Inter-chr p13.2 p11.23 118207 ChimerSeq ChiTaRs ChiTaRs IST1-NXF1 IST1 chr16 71929492 NXF1 chr11 62570921 Exonic hg19 NA DB214465 5'UTR-CDS Inter-chr q22.2 q12.3 118208 ChimerSeq ChiTaRs ChiTaRs DYNC1H1-DYNC1H1 DYNC1H1 chr14 102442132 DYNC1H1 chr14 102514272 Exonic hg19 NA BF091489 Out-of-frame Intra-chr q32.31 q32.31 118209 ChimerSeq ChiTaRs ChiTaRs RPL3-RPL3 RPL3 chr22 39715630 RPL3 chr22 39710198 Exonic hg19 NA BQ349966 Out-of-frame Intra-chr q13.1 q13.1 118210 ChimerSeq ChiTaRs ChiTaRs NDE1-LSS NDE1 chr16 15814046 LSS chr21 47635094 Exonic hg19 NA BE827726 Out-of-frame Inter-chr p13.11 q22.3 118211 ChimerSeq ChiTaRs ChiTaRs FURIN-FLOT2 FURIN chr15 91424922 FLOT2 chr17 27207151 Exonic hg19 NA CK822852 Out-of-frame Inter-chr q26.1 q11.2 118212 ChimerSeq ChiTaRs ChiTaRs KLF13-NBPF14 KLF13 chr15 31657462 NBPF14 chr1 144995977 Exonic hg19 NA BE144868 Out-of-frame Inter-chr Transcription factor q21.2 118213 ChimerSeq ChiTaRs ChiTaRs KIAA0195-KIAA0195 KIAA0195 chr17 73484216 KIAA0195 chr17 73484875 Exonic hg19 NA AW898493 Out-of-frame Intra-chr 118214 ChimerSeq ChiTaRs ChiTaRs RUNX1-BMPR1B RUNX1 chr21 36286088 BMPR1B chr4 95732914 Exonic hg19 NA DQ207770 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q22.3 TKL:STKR 118215 ChimerSeq ChiTaRs ChiTaRs NPRL3-NPRL3 NPRL3 chr16 143291 NPRL3 chr16 138857 Exonic hg19 NA EL583346 Out-of-frame Intra-chr p13.3 p13.3 118216 ChimerSeq ChiTaRs ChiTaRs PLCB1-NLGN2 PLCB1 chr20 8639283 NLGN2 chr17 7320966 Exonic hg19 NA AA984410 Out-of-frame Inter-chr p12.3 118217 ChimerSeq ChiTaRs ChiTaRs ZFP36L1-LARGE ZFP36L1 chr14 69257903 LARGE chr22 33777798 Exonic hg19 NA BE811922 Out-of-frame Inter-chr q24.1 118218 ChimerSeq ChiTaRs ChiTaRs CD68-CD68 CD68 chr17 7484073 CD68 chr17 7483278 Exonic hg19 NA AW947262 Out-of-frame Intra-chr p13.1 p13.1 118219 ChimerSeq ChiTaRs ChiTaRs PRR14L-YWHAH PRR14L chr22 32146115 YWHAH chr22 32352125 Exonic hg19 NA CB112861 5'UTR-CDS Intra-chr q12.2 q12.3 118220 ChimerSeq ChiTaRs ChiTaRs ISM1-UGGT1 ISM1 chr20 13275932 UGGT1 chr2 128939832 Exonic hg19 NA BE930748 Out-of-frame Inter-chr p12.1 q14.3 118221 ChimerSeq ChiTaRs ChiTaRs BCL11B-BCL11B BCL11B chr14 99655583 BCL11B chr14 99655740 Exonic hg19 NA EL582408 Out-of-frame Intra-chr q32.2 Oncogene Transcription factor q32.2 Oncogene Transcription factor 118222 ChimerSeq ChiTaRs ChiTaRs ILVBL-ILVBL ILVBL chr19 15230846 ILVBL chr19 15227286 Exonic hg19 NA BF763942 Out-of-frame Intra-chr p13.12 p13.12 118223 ChimerSeq ChiTaRs ChiTaRs TAGLN-LRRC61 TAGLN chr11 117075508 LRRC61 chr7 150034500 Exonic hg19 NA AA468630 3'UTR-CDS Inter-chr q23.3 Tumor suppressor gene q36.1 118224 ChimerSeq ChiTaRs ChiTaRs CYP19A1-SHC1 CYP19A1 chr15 51594985 SHC1 chr1 154940221 Exonic hg19 NA BF992585 Out-of-frame Inter-chr q21.2 q21.3 118225 ChimerSeq ChiTaRs ChiTaRs CKB-CKB CKB chr14 103986879 CKB chr14 103986507 Exonic hg19 NA BQ320618 Out-of-frame Intra-chr q32.33 q32.33 118226 ChimerSeq ChiTaRs ChiTaRs PQLC1-PQLC1 PQLC1 chr18 77675518 PQLC1 chr18 77675742 Exonic hg19 NA BF932048 Out-of-frame Intra-chr q23 q23 118227 ChimerSeq ChiTaRs ChiTaRs TEAD2-PPY TEAD2 chr19 49844436 PPY chr17 42018173 Exonic hg19 NA BP394212 Out-of-frame Inter-chr q13.33 Transcription factor q21.31 118228 ChimerSeq ChiTaRs ChiTaRs C11orf84-C11orf84 C11orf84 chr11 63595188 C11orf84 chr11 63585486 Exonic hg19 NA BQ025897 Out-of-frame Intra-chr q13.1 q13.1 118229 ChimerSeq ChiTaRs ChiTaRs OSBPL8-MINPP1 OSBPL8 chr12 76769091 MINPP1 chr10 89294320 Exonic hg19 NA AW946996 Out-of-frame Inter-chr q21.2 q23.2 118230 ChimerSeq ChiTaRs ChiTaRs MYCBP2-NAT8L MYCBP2 chr13 77858760 NAT8L chr4 2070754 Exonic hg19 NA BQ948308 Out-of-frame Inter-chr q22.3 p16.3 118231 ChimerSeq ChiTaRs ChiTaRs FKBP10-FKBP10 FKBP10 chr17 39978581 FKBP10 chr17 39978954 Exonic hg19 NA BE938548 Out-of-frame Intra-chr q21.2 q21.2 118232 ChimerSeq ChiTaRs ChiTaRs FBXL20-FBXL20 FBXL20 chr17 37416468 FBXL20 chr17 37416284 Exonic hg19 NA BE939522 Out-of-frame Intra-chr q12 q12 118233 ChimerSeq ChiTaRs ChiTaRs DHX38-DHX38 DHX38 chr16 72146382 DHX38 chr16 72146382 Exonic hg19 NA BF895636 Out-of-frame Intra-chr q22.2 q22.2 118234 ChimerSeq ChiTaRs ChiTaRs CCDC106-CCDC106 CCDC106 chr19 56164169 CCDC106 chr19 56162683 Exonic hg19 NA BQ640263 Out-of-frame Intra-chr q13.42 q13.42 118235 ChimerSeq ChiTaRs ChiTaRs MRC2-MRC2 MRC2 chr17 60758224 MRC2 chr17 60758177 Exonic hg19 NA BF800633 Out-of-frame Intra-chr q23.2 q23.2 118236 ChimerSeq ChiTaRs ChiTaRs DACT1-COL1A1 DACT1 chr14 59114217 COL1A1 chr17 48264057 Exonic hg19 NA AW840527 Out-of-frame Inter-chr q23.1 Tumor suppressor gene q21.33 Oncogene 118237 ChimerSeq ChiTaRs ChiTaRs RHBDF1-SPRR2A RHBDF1 chr16 108595 SPRR2A chr1 153028802 Exonic hg19 NA BE181563 Out-of-frame Inter-chr p13.3 q21.3 118238 ChimerSeq ChiTaRs ChiTaRs RNASE1-SPR RNASE1 chr14 21269654 SPR chr2 73119038 Exonic hg19 NA AA026313 Out-of-frame Inter-chr q11.2 p13.2 118239 ChimerSeq ChiTaRs ChiTaRs KLK3-CDC42EP4 KLK3 chr19 51361401 CDC42EP4 chr17 71282002 Exonic hg19 NA DA874433 Out-of-frame Inter-chr q13.33 q25.1 118240 ChimerSeq ChiTaRs ChiTaRs KRT19-KRT19 KRT19 chr17 39680703 KRT19 chr17 39680736 Exonic hg19 NA BG875195 Out-of-frame Intra-chr q21.2 Tumor suppressor gene q21.2 Tumor suppressor gene 118241 ChimerSeq ChiTaRs ChiTaRs LOC284889-ZFP36L2 LOC284889 chr22 24237406 ZFP36L2 chr2 43451789 Exonic hg19 NA BM683160 Out-of-frame Inter-chr p21 Tumor suppressor gene 118242 ChimerSeq ChiTaRs ChiTaRs KLK3-PSMD7 KLK3 chr19 51361508 PSMD7 chr16 74330845 Exonic hg19 NA BF858256 Out-of-frame Inter-chr q13.33 q23.1 118243 ChimerSeq ChiTaRs ChiTaRs FUT5-FUT5 FUT5 chr19 5896511 FUT5 chr19 5896546 Exonic hg19 NA AA722701 Out-of-frame Intra-chr p13.3 p13.3 118244 ChimerSeq ChiTaRs ChiTaRs SPIRE2-SPIRE2 SPIRE2 chr16 89927630 SPIRE2 chr16 89929882 Exonic hg19 NA BI058572 Out-of-frame Intra-chr q24.3 q24.3 118245 ChimerSeq ChiTaRs ChiTaRs DIDO1-LOC100507351 DIDO1 chr20 61536671 LOC100507351 chr17 75551857 Exonic hg19 NA AW470879 Out-of-frame Inter-chr q13.33 Tumor suppressor gene 118246 ChimerSeq ChiTaRs ChiTaRs PLEKHB1-PLEKHB1 PLEKHB1 chr11 73362882 PLEKHB1 chr11 73371820 Exonic hg19 NA AI359186 Out-of-frame Intra-chr q13.4 q13.4 118247 ChimerSeq ChiTaRs ChiTaRs CBFB-NDE1 CBFB chr16 67116213 NDE1 chr16 15814849 Exonic hg19 NA AF249898 Out-of-frame Intra-chr q22.1 p13.11 118248 ChimerSeq ChiTaRs ChiTaRs FBN1-FBN1 FBN1 chr15 48787433 FBN1 chr15 48829834 Exonic hg19 NA BP321103 Out-of-frame Intra-chr q21.1 q21.1 118249 ChimerSeq ChiTaRs ChiTaRs VAC14-CENPT VAC14 chr16 70778361 CENPT chr16 67866188 Exonic hg19 NA BF756717 Out-of-frame Intra-chr q22.2 q22.1 Transcription factor 118250 ChimerSeq ChiTaRs ChiTaRs SLC38A7-ZNF853 SLC38A7 chr16 58700435 ZNF853 chr7 6663198 Exonic hg19 NA BG987072 Out-of-frame Inter-chr q21 p22.1 Transcription factor 118251 ChimerSeq ChiTaRs ChiTaRs DIDO1-SEC61A1 DIDO1 chr20 61541296 SEC61A1 chr3 127789080 Exonic hg19 NA BF959743 Out-of-frame Inter-chr q13.33 Tumor suppressor gene q21.3 118252 ChimerSeq ChiTaRs ChiTaRs ACTN4-MYO15A ACTN4 chr19 39215125 MYO15A chr17 18075745 Exonic hg19 NA BF991832 Out-of-frame Inter-chr p11.2 118253 ChimerSeq ChiTaRs ChiTaRs TAF15-GLTSCR2 TAF15 chr17 34171586 GLTSCR2 chr19 48259039 Exonic hg19 NA BF802471 Out-of-frame Inter-chr q12 Tumor suppressor gene 118254 ChimerSeq ChiTaRs ChiTaRs LMTK3-LMTK3 LMTK3 chr19 48988946 LMTK3 chr19 48988586 Exonic hg19 NA BG959282 Out-of-frame Intra-chr q13.33 q13.33 118255 ChimerSeq ChiTaRs ChiTaRs PITPNM1-LOC100128338 PITPNM1 chr11 67265495 LOC100128338 chr8 144823698 Exonic hg19 NA BF876894 CDS-5'UTR Inter-chr q13.2 118256 ChimerSeq ChiTaRs ChiTaRs IVD-IVD IVD chr15 40703544 IVD chr15 40702909 Exonic hg19 NA AA232469 Out-of-frame Intra-chr q15.1 q15.1 118257 ChimerSeq ChiTaRs ChiTaRs MRPL12-MRPL12 MRPL12 chr17 79674540 MRPL12 chr17 79671273 Exonic hg19 NA AI761218 3'UTR-CDS Intra-chr q25.3 q25.3 118258 ChimerSeq ChiTaRs ChiTaRs DIDO1-TTI1 DIDO1 chr20 61569262 TTI1 chr20 36634707 Exonic hg19 NA XX000004 Out-of-frame Intra-chr q13.33 Tumor suppressor gene q11.23 118259 ChimerSeq ChiTaRs ChiTaRs U2AF2-ECSCR U2AF2 chr19 56186082 ECSCR chr5 138784781 Exonic hg19 NA CD368741 3'UTR-CDS Inter-chr q13.42 q31.2 118260 ChimerSeq ChiTaRs ChiTaRs DDX39A-FAM160A2 DDX39A chr19 14520151 FAM160A2 chr11 6232629 Exonic hg19 NA EC521059 Out-of-frame Inter-chr p13.12 p15.4 118261 ChimerSeq ChiTaRs ChiTaRs CYP19A1-MRPS25 CYP19A1 chr15 51613471 MRPS25 chr3 15094383 Exonic hg19 NA BI049242 Out-of-frame Inter-chr q21.2 p25.1 118262 ChimerSeq ChiTaRs ChiTaRs RBM39-GOLGB1 RBM39 chr20 34330143 GOLGB1 chr3 121410862 Exonic hg19 NA DW433159 Out-of-frame Inter-chr q11.22 q13.33 118263 ChimerSeq ChiTaRs ChiTaRs ST14-OTUD5 ST14 chr11 130060547 OTUD5 chrX 48791784 Exonic hg19 NA BX390952 Out-of-frame Inter-chr q24.3 p11.23 118264 ChimerSeq ChiTaRs ChiTaRs NAP1L1-LDHAL6A NAP1L1 chr12 76450247 LDHAL6A chr11 18494786 Exonic hg19 NA T05071 Out-of-frame Inter-chr q21.2 p15.1 118265 ChimerSeq ChiTaRs ChiTaRs DEPDC5-CELSR1 DEPDC5 chr22 32275603 CELSR1 chr22 46790058 Exonic hg19 NA BF845393 Out-of-frame Intra-chr q12.2 q13.31 118266 ChimerSeq ChiTaRs ChiTaRs PSME2-ANKRD46 PSME2 chr14 24614674 ANKRD46 chr8 101534603 Exonic hg19 NA AV646791 CDS-3'UTR Inter-chr q12 q22.3 118267 ChimerSeq ChiTaRs ChiTaRs TAF15-PARM1 TAF15 chr17 34171548 PARM1 chr4 75937702 Exonic hg19 NA AV752989 Out-of-frame Inter-chr q12 q13.3 118268 ChimerSeq ChiTaRs ChiTaRs TCFL5-SNRPB TCFL5 chr20 61476986 SNRPB chr20 2444413 Exonic hg19 NA BE252218 Out-of-frame Intra-chr q13.33 Transcription factor p13 118269 ChimerSeq ChiTaRs ChiTaRs CENPBD1-LMF1 CENPBD1 chr16 90039174 LMF1 chr16 929569 Exonic hg19 NA DA922556 5'UTR-CDS Intra-chr q24.3 Transcription factor p13.3 118270 ChimerSeq ChiTaRs ChiTaRs MPRIP-FTL MPRIP chr17 17062204 FTL chr19 49469853 Exonic hg19 NA AI583347 Out-of-frame Inter-chr p11.2 q13.33 118271 ChimerSeq ChiTaRs ChiTaRs VAPB-IKZF3 VAPB chr20 56964573 IKZF3 chr17 37933922 Exonic hg19 NA XX000009 In-Frame Inter-chr q13.32 q21.1 Tumor suppressor gene Transcription factor Pub 118272 ChimerSeq ChiTaRs ChiTaRs GNAS-AS1-NPIPB7 GNAS-AS1 chr20 57425558 NPIPB7 chr16 28846392 Exonic hg19 NA BQ891868 Out-of-frame Inter-chr q13.32 Oncogene p12.1 Tumor suppressor gene 118273 ChimerSeq ChiTaRs ChiTaRs BCL2L2-PABPN1-BCAM BCL2L2-PABPN1 chr14 23795367 BCAM chr19 45322026 Exonic hg19 NA AW303547 Out-of-frame Inter-chr q11.2 Oncogene q13.32 118274 ChimerSeq ChiTaRs ChiTaRs LOC100652768-FKBPL LOC100652768 chr11 117074960 FKBPL chr6 3477831 Exonic hg19 NA CN274097 Out-of-frame Inter-chr 118275 ChimerSeq ChiTaRs ChiTaRs TPM4-WHAMM TPM4 chr19 16212926 WHAMM chr15 83503015 Exonic hg19 NA CR736824 Out-of-frame Inter-chr p13.12 q25.2 118276 ChimerSeq ChiTaRs ChiTaRs RNU12-ZNF239 RNU12 chr22 43011399 ZNF239 chr10 44053407 Exonic hg19 NA DA377695 5'UTR-CDS Inter-chr q13.2 q11.21 Transcription factor 118277 ChimerSeq ChiTaRs ChiTaRs LUC7L-YME1L1 LUC7L chr16 316095 YME1L1 chr10 27412576 Exonic hg19 NA AW015422 Out-of-frame Inter-chr p13.3 p12.1 118278 ChimerSeq ChiTaRs ChiTaRs LAMA3-SNAP25 LAMA3 chr18 21489176 SNAP25 chr20 10286843 Exonic hg19 NA AV726363 Out-of-frame Inter-chr q11.2 p12.2 118279 ChimerSeq ChiTaRs ChiTaRs KPNB1-MDH1 KPNB1 chr17 45757968 MDH1 chr2 63816113 Exonic hg19 NA BM741416 Out-of-frame Inter-chr q21.32 p15 118280 ChimerSeq ChiTaRs ChiTaRs PPP1R15A-HSPA1A PPP1R15A chr19 49379000 HSPA1A chr6 3079053 Exonic hg19 NA AV702122 Out-of-frame Inter-chr q13.33 118281 ChimerSeq ChiTaRs ChiTaRs MYL2-LOC100507412 MYL2 chr12 111352092 LOC100507412 chr? 110291 Exonic hg19 NA BP258778 Out-of-frame Inter-chr q24.11 118282 ChimerSeq ChiTaRs ChiTaRs PHLDA1-MBTD1 PHLDA1 chr12 76422823 MBTD1 chr17 49255450 Exonic hg19 NA BG254814 Out-of-frame Inter-chr q21.2 q21.33 118283 ChimerSeq ChiTaRs ChiTaRs GOLGA3-RPS11 GOLGA3 chr12 133402844 RPS11 chr19 50001201 Exonic hg19 NA CF130421 Out-of-frame Inter-chr q24.33 q13.33 118284 ChimerSeq ChiTaRs ChiTaRs FTL-SUMO3 FTL chr19 49470136 SUMO3 chr21 46226193 Exonic hg19 NA CA448614 3'UTR-3'UTR Inter-chr q13.33 q22.3 118285 ChimerSeq ChiTaRs ChiTaRs SLC38A10-HAGHL SLC38A10 chr17 79259514 HAGHL chr16 779428 Exonic hg19 NA AK128330 Out-of-frame Inter-chr q25.3 p13.3 118286 ChimerSeq ChiTaRs ChiTaRs USP30-ZFAND5 USP30 chr12 109495851 ZFAND5 chr9 74980048 Exonic hg19 NA CN367078 Out-of-frame Inter-chr q24.11 q21.13 118287 ChimerSeq ChiTaRs ChiTaRs MARK3-WARS MARK3 chr14 103969619 WARS chr14 100835424 Exonic hg19 NA BM977906 Out-of-frame Intra-chr q32.32 CAMK:CAMKL q32.2 118288 ChimerSeq ChiTaRs ChiTaRs RUNX1-TARDBP RUNX1 chr21 36259417 TARDBP chr1 11082634 Exonic hg19 NA S60998 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor p36.22 118289 ChimerSeq ChiTaRs ChiTaRs PLD3-CPNE5 PLD3 chr19 40882570 CPNE5 chr6 36790178 Exonic hg19 NA BE699806 Out-of-frame Inter-chr q13.2 p21.2 118290 ChimerSeq ChiTaRs ChiTaRs TMTC1-AKAP13 TMTC1 chr12 29838067 AKAP13 chr15 86261346 Exonic hg19 NA BF356164 Out-of-frame Inter-chr p11.22 q25.3 118291 ChimerSeq ChiTaRs ChiTaRs SLC25A3-UBE2QL1 SLC25A3 chr12 98987812 UBE2QL1 chr5 6491878 Exonic hg19 NA BC029403 Out-of-frame Inter-chr q23.1 p15.31 Tumor suppressor gene 118292 ChimerSeq ChiTaRs ChiTaRs GRTP1-GRSF1 GRTP1 chr13 113994470 GRSF1 chr4 71686475 Exonic hg19 NA CN407654 Out-of-frame Inter-chr q34 q13.3 118293 ChimerSeq ChiTaRs ChiTaRs FBL-HLA-E FBL chr19 40325381 HLA-E chr6 1793577 Exonic hg19 NA AW630569 Out-of-frame Inter-chr 118294 ChimerSeq ChiTaRs ChiTaRs RCBTB2-ARPC4-TTLL3 RCBTB2 chr13 49086281 ARPC4-TTLL3 chr3 9879528 Exonic hg19 NA BU175782 Out-of-frame Inter-chr q14.2 p25.3 118295 ChimerSeq ChiTaRs ChiTaRs MYLPF-HBG1 MYLPF chr16 30387754 HBG1 chr11 5274420 Exonic hg19 NA BM090652 Out-of-frame Inter-chr p11.2 p15.4 118296 ChimerSeq ChiTaRs ChiTaRs YDJC-UBAP2L YDJC chr22 21982689 UBAP2L chr1 154229649 Exonic hg19 NA AW380892 Out-of-frame Inter-chr q11.21 q21.3 118297 ChimerSeq ChiTaRs ChiTaRs TUBA1B-GRM4 TUBA1B chr12 49525178 GRM4 chr6 34101152 Exonic hg19 NA DA127449 Out-of-frame Inter-chr q13.12 p21.31 118298 ChimerSeq ChiTaRs ChiTaRs CLEC18A-LTBP1 CLEC18A chr16 70099756 LTBP1 chr2 33525516 Exonic hg19 NA BC038107 Out-of-frame Inter-chr q22.1 p22.3 118299 ChimerSeq ChiTaRs ChiTaRs ZNF77-NUP85 ZNF77 chr19 2944945 NUP85 chr17 73208085 Exonic hg19 NA DA567594 Out-of-frame Inter-chr p13.3 Transcription factor q25.1 118300 ChimerSeq ChiTaRs ChiTaRs FXYD6-FXYD2-LOC100507412 FXYD6-FXYD2 chr11 117747370 LOC100507412 chr? 109567 Exonic hg19 NA BP375613 Out-of-frame Inter-chr q23.3 118301 ChimerSeq ChiTaRs ChiTaRs MTMR2-ATP2C1 MTMR2 chr11 95657256 ATP2C1 chr3 130649258 Exonic hg19 NA DB155299 Out-of-frame Inter-chr q21 q22.1 118302 ChimerSeq ChiTaRs ChiTaRs CDH5-TUBB4B CDH5 chr16 66424453 TUBB4B chr9 140137262 Exonic hg19 NA AK310334 Out-of-frame Inter-chr q21 Oncogene Tumor suppressor gene q34.3 118303 ChimerSeq ChiTaRs ChiTaRs MIS18A-CYC1 MIS18A chr21 33651341 CYC1 chr8 145151031 Exonic hg19 NA BM562582 Out-of-frame Inter-chr q22.11 q24.3 118304 ChimerSeq ChiTaRs ChiTaRs GMPR2-STOML2 GMPR2 chr14 24707667 STOML2 chr9 35099893 Exonic hg19 NA AK075025 Out-of-frame Inter-chr q12 p13.3 118305 ChimerSeq ChiTaRs ChiTaRs PNPO-ALDH1A2 PNPO chr17 46025651 ALDH1A2 chr15 58245801 Exonic hg19 NA BG231914 Out-of-frame Inter-chr q21.32 q21.3 Tumor suppressor gene 118306 ChimerSeq ChiTaRs ChiTaRs EEF2-EEF2 EEF2 chr19 3982344 EEF2 chr19 3977241 Exonic hg19 NA AI075687 Out-of-frame Intra-chr p13.3 p13.3 118307 ChimerSeq ChiTaRs ChiTaRs ZNFX1-AS1-MAU2 ZNFX1-AS1 chr20 47895745 MAU2 chr19 19447979 Exonic hg19 NA DB150019 Out-of-frame Inter-chr p13.11 Tumor suppressor gene 118308 ChimerSeq ChiTaRs ChiTaRs NFKBIB-BGN NFKBIB chr19 39399204 BGN chrX 152774168 Exonic hg19 NA AW613805 Out-of-frame Inter-chr q28 118309 ChimerSeq ChiTaRs ChiTaRs ITGAE-CALHM2 ITGAE chr17 3618123 CALHM2 chr10 105207098 Exonic hg19 NA AI383570 Out-of-frame Inter-chr p13.2 q24.33 118310 ChimerSeq ChiTaRs ChiTaRs DDX24-NDRG1 DDX24 chr14 94526890 NDRG1 chr8 134249418 Exonic hg19 NA AK026383 Out-of-frame Inter-chr q24.22 Tumor suppressor gene 118311 ChimerSeq ChiTaRs ChiTaRs PHKB-FAR1 PHKB chr16 47733387 FAR1 chr11 13749157 Exonic hg19 NA BE707585 Out-of-frame Inter-chr q12.1 p15.3 118312 ChimerSeq ChiTaRs ChiTaRs IFI27L2-SEPT9 IFI27L2 chr14 94594329 2009_ 9_ 1_ chr17 75488734 Exonic hg19 NA BM991744 Out-of-frame Inter-chr q32.12 118313 ChimerSeq ChiTaRs ChiTaRs LPAR5-RPL3 LPAR5 chr12 6745126 RPL3 chr22 39711434 Exonic hg19 NA CD699756 Out-of-frame Inter-chr p13.31 q13.1 118314 ChimerSeq ChiTaRs ChiTaRs GAPDH-SON GAPDH chr12 6645897 SON chr21 34927473 Exonic hg19 NA DA446259 Out-of-frame Inter-chr p13.31 q22.11 Transcription factor 118315 ChimerSeq ChiTaRs ChiTaRs ECH1-ECH1 ECH1 chr19 39307135 ECH1 chr19 39306072 Exonic hg19 NA BF911234 Out-of-frame Intra-chr 118316 ChimerSeq ChiTaRs ChiTaRs DLEU2-STIM1 DLEU2 chr13 50656693 STIM1 chr11 4076753 Exonic hg19 NA DB149054 Out-of-frame Inter-chr q14.2 Tumor suppressor gene p15.4 118317 ChimerSeq ChiTaRs ChiTaRs SGSM2-GAD1 SGSM2 chr17 2284348 GAD1 chr2 171705814 Exonic hg19 NA AW162120 3'UTR-3'UTR Inter-chr p13.3 Transcription factor q31.1 118318 ChimerSeq ChiTaRs ChiTaRs TMEM126B-GRIA4 TMEM126B chr11 85346822 GRIA4 chr11 105782602 Exonic hg19 NA BP213476 Out-of-frame Intra-chr q14.1 q22.3 118319 ChimerSeq ChiTaRs ChiTaRs CNN2-SSU72 CNN2 chr19 1032695 SSU72 chr1 1500245 Exonic hg19 NA DB278470 Out-of-frame Inter-chr p13.3 p36.33 118320 ChimerSeq ChiTaRs ChiTaRs RPS16-GABARAPL1 RPS16 chr19 39924014 GABARAPL1 chr12 10370662 Exonic hg19 NA CB528938 Out-of-frame Inter-chr q13.2 p13.2 118321 ChimerSeq ChiTaRs ChiTaRs MYL2-DSE MYL2 chr12 111358383 DSE chr6 116598255 Exonic hg19 NA BF577271 Out-of-frame Inter-chr q24.11 q22.1 118322 ChimerSeq ChiTaRs ChiTaRs ERGIC3-H2AFZ ERGIC3 chr20 34145243 H2AFZ chr4 100870046 Exonic hg19 NA BF987576 Out-of-frame Inter-chr q11.22 q23 118323 ChimerSeq ChiTaRs ChiTaRs IMPACT-DPY19L4 IMPACT chr18 22033491 DPY19L4 chr8 95802664 Exonic hg19 NA BU754222 Out-of-frame Inter-chr q11.2 q22.1 118324 ChimerSeq ChiTaRs ChiTaRs PRKAR1A-FAM65C PRKAR1A chr17 66518922 FAM65C chr20 49211470 Exonic hg19 NA DA334350 Out-of-frame Inter-chr q24.2 Oncogene Tumor suppressor gene 118325 ChimerSeq ChiTaRs ChiTaRs TMEM59L-SYNGR1 TMEM59L chr19 18724750 SYNGR1 chr22 39779377 Exonic hg19 NA AK308714 Out-of-frame Inter-chr p13.11 q13.1 118326 ChimerSeq ChiTaRs ChiTaRs GNAS-EAF1 GNAS chr20 57485748 EAF1 chr3 15469296 Exonic hg19 NA BQ308361 Out-of-frame Inter-chr q13.32 Oncogene p25.1 Tumor suppressor gene 118327 ChimerSeq ChiTaRs ChiTaRs GH1-GUSBP11 GH1 chr17 61995148 GUSBP11 chr22 23981089 Exonic hg19 NA AV749162 Out-of-frame Inter-chr q23.3 q11.23 118328 ChimerSeq ChiTaRs ChiTaRs MYL12A-MYL12A MYL12A chr18 3247902 MYL12A chr18 3253242 Exonic hg19 NA BF895626 Out-of-frame Intra-chr p11.31 p11.31 118329 ChimerSeq ChiTaRs ChiTaRs TSPAN16-HADH TSPAN16 chr19 11437672 HADH chr4 108940694 Exonic hg19 NA AF133424 3'UTR-CDS Inter-chr p13.2 q25 118330 ChimerSeq ChiTaRs ChiTaRs CST3-VPS13D CST3 chr20 23614371 VPS13D chr1 12418562 Exonic hg19 NA AI377029 Out-of-frame Inter-chr p11.21 p36.22 118331 ChimerSeq ChiTaRs ChiTaRs ENOX1-ECHS1 ENOX1 chr13 43912392 ECHS1 chr10 135176248 Exonic hg19 NA AW518107 Out-of-frame Inter-chr q14.11 q26.3 118332 ChimerSeq ChiTaRs ChiTaRs PRR13-VIM PRR13 chr12 53840118 VIM chr10 17277252 Exonic hg19 NA BQ573942 Out-of-frame Inter-chr q13.13 p13 Tumor suppressor gene 118333 ChimerSeq ChiTaRs ChiTaRs TPI1-TOP2B TPI1 chr12 6976792 TOP2B chr3 25656965 Exonic hg19 NA BC054482 Out-of-frame Inter-chr p13.31 p24.2 118334 ChimerSeq ChiTaRs ChiTaRs CILP-RAB11FIP4 CILP chr15 65489045 RAB11FIP4 chr17 29864793 Exonic hg19 NA BQ183535 Out-of-frame Inter-chr q22.31 q11.2 118335 ChimerSeq ChiTaRs ChiTaRs PAFAH1B2-ARID5A PAFAH1B2 chr11 117015134 ARID5A chr2 97213139 Exonic hg19 NA CT002325 5'UTR-CDS Inter-chr q23.3 q11.2 Transcription factor 118336 ChimerSeq ChiTaRs ChiTaRs RPLP1-ASH2L RPLP1 chr15 69746060 ASH2L chr8 37985814 Exonic hg19 NA CX751919 5'UTR-CDS Inter-chr q23 p11.23 118337 ChimerSeq ChiTaRs ChiTaRs SS18-NRAS SS18 chr18 23597878 NRAS chr1 115247099 Exonic hg19 NA BG896663 Out-of-frame Inter-chr q11.2 p13.2 Oncogene 118338 ChimerSeq ChiTaRs ChiTaRs CACNA1H-COL6A2 CACNA1H chr16 1271772 COL6A2 chr21 47551996 Exonic hg19 NA AI184928 3'UTR-3'UTR Inter-chr p13.3 q22.3 118339 ChimerSeq ChiTaRs ChiTaRs LMO7-TGFBI LMO7 chr13 76335180 TGFBI chr5 135382540 Exonic hg19 NA BE736691 Out-of-frame Inter-chr q22.2 q31.1 Tumor suppressor gene 118340 ChimerSeq ChiTaRs ChiTaRs ATMIN-ATP6V1C2 ATMIN chr16 81077216 ATP6V1C2 chr2 10924118 Exonic hg19 NA AK026926 Out-of-frame Inter-chr q23.2 Tumor suppressor gene Transcription factor p25.1 118341 ChimerSeq ChiTaRs ChiTaRs CSH1-NFYA CSH1 chr17 61973209 NFYA chr6 41040751 Exonic hg19 NA AW949743 Out-of-frame Inter-chr q23.3 p21.1 Transcription factor 118342 ChimerSeq ChiTaRs ChiTaRs SERINC3-LOC100507412 SERINC3 chr20 43135616 LOC100507412 chr? 109607 Exonic hg19 NA BP275593 Out-of-frame Inter-chr q13.12 118343 ChimerSeq ChiTaRs ChiTaRs TRAPPC1-PRKCE TRAPPC1 chr17 7834048 PRKCE chr2 46414673 Exonic hg19 NA D81134 Out-of-frame Inter-chr p13.1 p21 Tumor suppressor gene 118344 ChimerSeq ChiTaRs ChiTaRs EXPH5-UBE2V1 EXPH5 chr11 108464364 UBE2V1 chr20 48712823 Exonic hg19 NA CD101703 Out-of-frame Inter-chr q22.3 q13.13 118345 ChimerSeq ChiTaRs ChiTaRs TCF20-TM2D2 TCF20 chr22 42605900 TM2D2 chr8 38848946 Exonic hg19 NA BE714945 Out-of-frame Inter-chr Transcription factor p11.22 118346 ChimerSeq ChiTaRs ChiTaRs NPIPB7-TMEM9B NPIPB7 chr16 28975991 TMEM9B chr11 8969555 Exonic hg19 NA AA152202 Out-of-frame Inter-chr p12.1 p15.4 118347 ChimerSeq ChiTaRs ChiTaRs TEF-CRYAB TEF chr22 41794533 CRYAB chr11 111779480 Exonic hg19 NA BF727201 Out-of-frame Inter-chr q13.2 Transcription factor q23.1 118348 ChimerSeq ChiTaRs ChiTaRs PQLC1-ZNFX1-AS1 PQLC1 chr18 77710842 ZNFX1-AS1 chr20 47895637 Exonic hg19 NA AI763093 Out-of-frame Inter-chr q23 118349 ChimerSeq ChiTaRs ChiTaRs ELL-HERC2P7 ELL chr19 18632868 HERC2P7 chr15 23390722 Exonic hg19 NA BC012949 Out-of-frame Inter-chr p13.11 118350 ChimerSeq ChiTaRs ChiTaRs ZNF592-HDAC1 ZNF592 chr15 85327601 HDAC1 chr1 32757744 Exonic hg19 NA BQ685262 Out-of-frame Inter-chr q25.3 Transcription factor p35.2 Tumor suppressor gene 118351 ChimerSeq ChiTaRs ChiTaRs ABCA6-LMNA ABCA6 chr17 67079154 LMNA chr1 156056308 Exonic hg19 NA AX473890 CDS-5'UTR Inter-chr q24.3 q22 118352 ChimerSeq ChiTaRs ChiTaRs TNFRSF12A-KIAA0195 TNFRSF12A chr16 3072381 KIAA0195 chr17 73486403 Exonic hg19 NA AI401800 Out-of-frame Inter-chr p13.3 Tumor suppressor gene 118353 ChimerSeq ChiTaRs ChiTaRs UQCR11-SUGP2 UQCR11 chr19 1597392 SUGP2 chr19 19120797 Exonic hg19 NA CF529612 Out-of-frame Intra-chr p13.3 p13.11 118354 ChimerSeq ChiTaRs ChiTaRs MARK3-MTMR9 MARK3 chr14 103969611 MTMR9 chr8 11180475 Exonic hg19 NA AI218823 Out-of-frame Inter-chr q32.32 CAMK:CAMKL p23.1 118355 ChimerSeq ChiTaRs ChiTaRs MGRN1-CRIM1 MGRN1 chr16 4740973 CRIM1 chr2 36776416 Exonic hg19 NA AW294256 Out-of-frame Inter-chr p13.3 p22.2 118356 ChimerSeq ChiTaRs ChiTaRs NCOR1-SF3B1 NCOR1 chr17 16041526 SF3B1 chr2 198264798 Exonic hg19 NA BM836125 Out-of-frame Inter-chr p11.2 Oncogene q33.1 Oncogene 118357 ChimerSeq ChiTaRs ChiTaRs PROSER1-FMNL2 PROSER1 chr13 39608316 FMNL2 chr2 153192078 Exonic hg19 NA CR746249 Out-of-frame Inter-chr q13.3 q23.3 118358 ChimerSeq ChiTaRs ChiTaRs KNOP1-C16orf62 KNOP1 chr16 19725766 C16orf62 chr16 19710410 Exonic hg19 NA AW002855 Out-of-frame Intra-chr p12.3 p12.3 118359 ChimerSeq ChiTaRs ChiTaRs SLCO1A2-HP1BP3 SLCO1A2 chr12 21531761 HP1BP3 chr1 21069661 Exonic hg19 NA BP387918 Out-of-frame Inter-chr p12.1 p36.12 118360 ChimerSeq ChiTaRs ChiTaRs SS18-SSX4B SS18 chr18 23667540 SSX4B chrX 48262006 Exonic hg19 NA AF257501 Out-of-frame Inter-chr q11.2 p11.23 118361 ChimerSeq ChiTaRs ChiTaRs MPHOSPH8-SAT1 MPHOSPH8 chr13 20224305 SAT1 chrX 23803938 Exonic hg19 NA BM263653 Out-of-frame Inter-chr q12.11 p22.11 118362 ChimerSeq ChiTaRs ChiTaRs SLC39A6-PTMA SLC39A6 chr18 33691180 PTMA chr2 232576658 Exonic hg19 NA BQ683405 Out-of-frame Inter-chr q12.2 q37.1 118363 ChimerSeq ChiTaRs ChiTaRs ISYNA1-CSH2 ISYNA1 chr19 18547553 CSH2 chr17 61950608 Exonic hg19 NA AA368753 Out-of-frame Inter-chr p13.11 q23.3 118364 ChimerSeq ChiTaRs ChiTaRs APOC1-LAMA1 APOC1 chr19 45419584 LAMA1 chr18 7040169 Exonic hg19 NA DA183106 Out-of-frame Inter-chr q13.32 p11.31 118365 ChimerSeq ChiTaRs ChiTaRs MALAT1-HSP90AA1 MALAT1 chr11 65267197 HSP90AA1 chr14 102547391 Exonic hg19 NA D87666 Out-of-frame Inter-chr q13.1 q32.31 Oncogene 118366 ChimerSeq ChiTaRs ChiTaRs EEF2-LRRC4B EEF2 chr19 3982867 LRRC4B chr19 51037525 Exonic hg19 NA AW499012 Out-of-frame Intra-chr p13.3 q13.33 118367 ChimerSeq ChiTaRs ChiTaRs CYB561-PSPH CYB561 chr17 61518165 PSPH chr7 56119538 Exonic hg19 NA BI199927 Out-of-frame Inter-chr q23.3 p11.2 118368 ChimerSeq ChiTaRs ChiTaRs ESCO1-FAM210A ESCO1 chr18 19180654 FAM210A chr18 13665743 Exonic hg19 NA BC022410 Out-of-frame Intra-chr q11.2 p11.21 KB 118369 ChimerSeq ChiTaRs ChiTaRs SDF2L1-DUOX2 SDF2L1 chr22 21998588 DUOX2 chr15 45385646 Exonic hg19 NA AA533569 3'UTR-3'UTR Inter-chr q11.21 q21.1 118370 ChimerSeq ChiTaRs ChiTaRs LOC100506713-MYO10 LOC100506713 chr17 6915610 MYO10 chr5 16681442 Exonic hg19 NA CN401162 Out-of-frame Inter-chr p15.1 118371 ChimerSeq ChiTaRs ChiTaRs CCL4-ALOX5AP CCL4 chr17 34433007 ALOX5AP chr13 31326189 Exonic hg19 NA CA310224 Out-of-frame Inter-chr q12 q12.3 118372 ChimerSeq ChiTaRs ChiTaRs PAFAH1B2-ZFAND5 PAFAH1B2 chr11 117041360 ZFAND5 chr9 74974361 Exonic hg19 NA CB528508 Out-of-frame Inter-chr q23.3 q21.13 118373 ChimerSeq ChiTaRs ChiTaRs KRT6A-AP2B1 KRT6A chr12 52887042 AP2B1 chr17 33914354 Exonic hg19 NA DC348251 Out-of-frame Inter-chr q13.13 q12 118374 ChimerSeq ChiTaRs ChiTaRs DDX19B-HNRNPM DDX19B chr16 70333210 HNRNPM chr19 8553693 Exonic hg19 NA BU535721 Out-of-frame Inter-chr q22.1 p13.2 118375 ChimerSeq ChiTaRs ChiTaRs SLC39A6-RHOA SLC39A6 chr18 33689138 RHOA chr3 49397702 Exonic hg19 NA AU141201 Out-of-frame Inter-chr q12.2 p21.31 Oncogene Tumor suppressor gene 118376 ChimerSeq ChiTaRs ChiTaRs BAZ1A-DOCK9 BAZ1A chr14 35279556 DOCK9 chr13 99489748 Exonic hg19 NA AW380042 Out-of-frame Inter-chr q13.2 q32.3 118377 ChimerSeq ChiTaRs ChiTaRs MBP-SWAP70 MBP chr18 74725036 SWAP70 chr11 9761728 Exonic hg19 NA CA436904 Out-of-frame Inter-chr q23 p15.4 118378 ChimerSeq ChiTaRs ChiTaRs HSPBP1-SF3B2 HSPBP1 chr19 55791467 SF3B2 chr11 65828125 Exonic hg19 NA BU191520 Out-of-frame Inter-chr q13.42 q13.1 118379 ChimerSeq ChiTaRs ChiTaRs GAPDH-JUP GAPDH chr12 6646143 JUP chr17 39847268 Exonic hg19 NA BQ314752 Out-of-frame Inter-chr p13.31 q21.2 Tumor suppressor gene 118380 ChimerSeq ChiTaRs ChiTaRs ZSCAN30-GNB1 ZSCAN30 chr18 32870148 GNB1 chr1 1747201 Exonic hg19 NA BF307939 Out-of-frame Inter-chr q12.2 Transcription factor p36.33 118381 ChimerSeq ChiTaRs ChiTaRs FTL-LOC100133331 FTL chr19 49469931 LOC100133331 chr5 180747702 Exonic hg19 NA AA077789 Out-of-frame Inter-chr q13.33 118382 ChimerSeq ChiTaRs ChiTaRs PRSS53-TBC1D24 PRSS53 chr16 31102648 TBC1D24 chr16 2569270 Exonic hg19 NA CA309365 Out-of-frame Intra-chr p11.2 p13.3 118383 ChimerSeq ChiTaRs ChiTaRs TAF1D-ERMN TAF1D chr11 93464732 ERMN chr2 158176802 Exonic hg19 NA DA340713 Out-of-frame Inter-chr q21 q24.1 118384 ChimerSeq ChiTaRs ChiTaRs APP-RAB11FIP1 APP chr21 27539642 RAB11FIP1 chr8 37718185 Exonic hg19 NA AK074469 Out-of-frame Inter-chr q21.3 p11.23 118385 ChimerSeq ChiTaRs ChiTaRs NEAT1-MBP NEAT1 chr11 65206894 MBP chr18 74728823 Exonic hg19 NA DB167927 Out-of-frame Inter-chr q13.1 q23 118386 ChimerSeq ChiTaRs ChiTaRs MIDN-MIDN MIDN chr19 1258639 MIDN chr19 1258104 Exonic hg19 NA AA641890 Out-of-frame Intra-chr p13.3 p13.3 118387 ChimerSeq ChiTaRs ChiTaRs SEC14L2-SLPI SEC14L2 chr22 30812008 SLPI chr20 43881711 Exonic hg19 NA R49911 Out-of-frame Inter-chr q12.2 Tumor suppressor gene q13.12 118388 ChimerSeq ChiTaRs ChiTaRs B2M-SLC37A3 B2M chr15 45010343 SLC37A3 chr7 140033658 Exonic hg19 NA CA412504 Out-of-frame Inter-chr Oncogene q34 118389 ChimerSeq ChiTaRs ChiTaRs ACTG1-CD74 ACTG1 chr17 79479066 CD74 chr5 149782478 Exonic hg19 NA BF884382 Out-of-frame Inter-chr q25.3 q33.1 118390 ChimerSeq ChiTaRs ChiTaRs BLCAP-PIGT BLCAP chr20 36156299 PIGT chr20 44049178 Exonic hg19 NA DA420206 Out-of-frame Intra-chr q11.23 Tumor suppressor gene q13.12 118391 ChimerSeq ChiTaRs ChiTaRs RFNG-TALDO1 RFNG chr17 80005846 TALDO1 chr11 755983 Exonic hg19 NA AW408845 Out-of-frame Inter-chr q25.3 p15.5 118392 ChimerSeq ChiTaRs ChiTaRs PTRF-TSC22D3 PTRF chr17 40575274 TSC22D3 chrX 106959920 Exonic hg19 NA DB271724 Out-of-frame Inter-chr q22.3 118393 ChimerSeq ChiTaRs ChiTaRs NARS-PVT1 NARS chr18 55270060 PVT1 chr8 128910187 Exonic hg19 NA BE073927 Out-of-frame Inter-chr q21.31 q24.21 118394 ChimerSeq ChiTaRs ChiTaRs BCL11B-TRA@ BCL11B chr14 99737555 TRA@ chr14 22931921 Exonic hg19 NA AY752976 Out-of-frame Intra-chr q32.2 Oncogene Transcription factor q11.2 118395 ChimerSeq ChiTaRs ChiTaRs ZHX3-SRM ZHX3 chr20 39809288 SRM chr1 11114816 Exonic hg19 NA BE076723 Out-of-frame Inter-chr q12 Transcription factor p36.22 TK:Src 118396 ChimerSeq ChiTaRs ChiTaRs LIMA1-ANKRD40 LIMA1 chr12 50677320 ANKRD40 chr17 48777109 Exonic hg19 NA DA082563 Out-of-frame Inter-chr q13.12 Tumor suppressor gene q21.33 118397 ChimerSeq ChiTaRs ChiTaRs LOC388152-LOC440354 LOC388152 chr15 84898888 LOC440354 chr16 29502928 Exonic hg19 NA DB125546 Out-of-frame Inter-chr 118398 ChimerSeq ChiTaRs ChiTaRs CHD2-TPI1 CHD2 chr15 93470537 TPI1 chr12 6979751 Exonic hg19 NA DW413329 Out-of-frame Inter-chr q26.1 p13.31 118399 ChimerSeq ChiTaRs ChiTaRs MYO1C-RABL5 MYO1C chr17 1385851 RABL5 chr7 100958438 Exonic hg19 NA CD515671 Out-of-frame Inter-chr p13.3 118400 ChimerSeq ChiTaRs ChiTaRs RPLP1-SIAH2 RPLP1 chr15 69747886 SIAH2 chr3 150459044 Exonic hg19 NA BM768334 Out-of-frame Inter-chr q23 q25.1 118401 ChimerSeq ChiTaRs ChiTaRs IMPACT-DPY19L4 IMPACT chr18 22033812 DPY19L4 chr8 95802870 Exonic hg19 NA BF589372 Out-of-frame Inter-chr q11.2 q22.1 118402 ChimerSeq ChiTaRs ChiTaRs TCF12-FTL TCF12 chr15 57580143 FTL chr19 49468732 Exonic hg19 NA M10119 Out-of-frame Inter-chr q21.3 Oncogene Transcription factor q13.33 118403 ChimerSeq ChiTaRs ChiTaRs RPL38-CITED1 RPL38 chr17 72206007 CITED1 chrX 71526489 Exonic hg19 NA BE388615 Out-of-frame Inter-chr q25.1 q13.1 118404 ChimerSeq ChiTaRs ChiTaRs TMEM91-DTX4 TMEM91 chr19 41870001 DTX4 chr11 58962681 Exonic hg19 NA BM922123 Out-of-frame Inter-chr q13.2 q12.1 118405 ChimerSeq ChiTaRs ChiTaRs NPIPB7-SMG6 NPIPB7 chr16 28550333 SMG6 chr17 2057997 Exonic hg19 NA BP250136 Out-of-frame Inter-chr p12.1 p13.3 118406 ChimerSeq ChiTaRs ChiTaRs RPL23-DFFA RPL23 chr17 37009971 DFFA chr1 10521426 Exonic hg19 NA AI968908 Out-of-frame Inter-chr q12 p36.22 Tumor suppressor gene 118407 ChimerSeq ChiTaRs ChiTaRs HSP90AA1-PCDHB5 HSP90AA1 chr14 102552335 PCDHB5 chr5 140517319 Exonic hg19 NA CN256724 Out-of-frame Inter-chr q32.31 Oncogene q31.3 118408 ChimerSeq ChiTaRs ChiTaRs GGA2-RPF1 GGA2 chr16 23521704 RPF1 chr1 84956001 Exonic hg19 NA AW977393 Out-of-frame Inter-chr p12.2 p22.3 Tumor suppressor gene 118409 ChimerSeq ChiTaRs ChiTaRs HSP90AA1-PAIP1 HSP90AA1 chr14 102551205 PAIP1 chr5 43535707 Exonic hg19 NA BU734173 Out-of-frame Inter-chr q32.31 Oncogene p12 118410 ChimerSeq ChiTaRs ChiTaRs MALAT1-HS1BP3 MALAT1 chr11 65267997 HS1BP3 chr2 20837128 Exonic hg19 NA BF879858 Out-of-frame Inter-chr q13.1 p24.1 118411 ChimerSeq ChiTaRs ChiTaRs CERS5-NPL CERS5 chr12 50561097 NPL chr1 182791249 Exonic hg19 NA BU181747 5'UTR-CDS Inter-chr q13.12 q25.3 118412 ChimerSeq ChiTaRs ChiTaRs APOBEC3G-HGSNAT APOBEC3G chr22 39472513 HGSNAT chr8 43057309 Exonic hg19 NA AI919317 Out-of-frame Inter-chr q13.1 p11.21 118413 ChimerSeq ChiTaRs ChiTaRs EXOC7-GBA2 EXOC7 chr17 74080149 GBA2 chr9 35741924 Exonic hg19 NA BE062259 Out-of-frame Inter-chr q25.1 p13.3 118414 ChimerSeq ChiTaRs ChiTaRs EBPL-COL1A2 EBPL chr13 50265544 COL1A2 chr7 94057159 Exonic hg19 NA BJ997227 Out-of-frame Inter-chr q14.2 q21.3 118415 ChimerSeq ChiTaRs ChiTaRs NUDT4-LRRC57 NUDT4 chr12 93794342 LRRC57 chr15 42834722 Exonic hg19 NA BM557162 Out-of-frame Inter-chr q22 q15.2 118416 ChimerSeq ChiTaRs ChiTaRs CDK2AP2-PFDN5 CDK2AP2 chr11 67274432 PFDN5 chr12 53689349 Exonic hg19 NA AI351791 Out-of-frame Inter-chr q13.2 q13.13 118417 ChimerSeq ChiTaRs ChiTaRs DCAF5-FAM122B DCAF5 chr14 69529217 FAM122B chrX 133930723 Exonic hg19 NA AW375215 Out-of-frame Inter-chr q24.1 q26.3 118418 ChimerSeq ChiTaRs ChiTaRs BCL2L2-PABPN1-CYP4F8 BCL2L2-PABPN1 chr14 23794621 CYP4F8 chr19 15733085 Exonic hg19 NA BF512006 Out-of-frame Inter-chr q11.2 Oncogene p13.12 118419 ChimerSeq ChiTaRs ChiTaRs RPL38-CITED1 RPL38 chr17 72206007 CITED1 chrX 71525968 Exonic hg19 NA BE409397 Out-of-frame Inter-chr q25.1 q13.1 118420 ChimerSeq ChiTaRs ChiTaRs RRP1-GAN RRP1 chr21 45217839 GAN chr16 81397417 Exonic hg19 NA BQ308823 Out-of-frame Inter-chr q22.3 q23.2 118421 ChimerSeq ChiTaRs ChiTaRs MYBPC1-TPM2 MYBPC1 chr12 102023309 TPM2 chr9 35682923 Exonic hg19 NA AA196377 Out-of-frame Inter-chr q23.2 p13.3 118422 ChimerSeq ChiTaRs ChiTaRs CIT-FTSJ3 CIT chr12 120135453 FTSJ3 chr17 61901503 Exonic hg19 NA BF933857 Out-of-frame Inter-chr q24.23 q23.3 118423 ChimerSeq ChiTaRs ChiTaRs PSME2-ANKRD46 PSME2 chr14 24614674 ANKRD46 chr8 101534607 Exonic hg19 NA AV651403 CDS-3'UTR Inter-chr q12 q22.3 118424 ChimerSeq ChiTaRs ChiTaRs SRC-REPIN1 SRC chr20 35993680 REPIN1 chr7 150068314 Exonic hg19 NA DA015724 5'UTR-5'UTR Inter-chr q11.23 TK:Src Oncogene q36.1 Transcription factor 118425 ChimerSeq ChiTaRs ChiTaRs SRP14-C1orf198 SRP14 chr15 40329550 C1orf198 chr1 230973433 Exonic hg19 NA BQ015130 Out-of-frame Inter-chr q15.1 q42.2 118426 ChimerSeq ChiTaRs ChiTaRs NUMA1-LSM10 NUMA1 chr11 71727558 LSM10 chr1 36859038 Exonic hg19 NA BQ674109 Out-of-frame Inter-chr q13.4 Oncogene p34.3 118427 ChimerSeq ChiTaRs ChiTaRs DAZAP1-MEF2D DAZAP1 chr19 1422396 MEF2D chr1 156437437 Exonic hg19 NA AY678451 Out-of-frame Inter-chr p13.3 q22 Transcription factor Pub 118428 ChimerSeq ChiTaRs ChiTaRs MYH9-PITHD1 MYH9 chr22 36732334 PITHD1 chr1 24113959 Exonic hg19 NA AX748195 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene p36.11 118429 ChimerSeq ChiTaRs ChiTaRs PAF1-ASNA1 PAF1 chr19 39880754 ASNA1 chr19 12859073 Exonic hg19 NA AA236422 Out-of-frame Intra-chr q13.2 p13.13 118430 ChimerSeq ChiTaRs ChiTaRs PIK3C3-DAB2 PIK3C3 chr18 39542478 DAB2 chr5 39375145 Exonic hg19 NA DW414072 Out-of-frame Inter-chr q12.3 p13.1 Tumor suppressor gene 118431 ChimerSeq ChiTaRs ChiTaRs RABEP1-EIF4G1 RABEP1 chr17 5281981 EIF4G1 chr3 184039589 Exonic hg19 NA AI205494 Out-of-frame Inter-chr p13.2 q27.1 118432 ChimerSeq ChiTaRs ChiTaRs LOC100506233-CAPRIN1 LOC100506233 chr11 82783749 CAPRIN1 chr11 34093273 Exonic hg19 NA DA398472 Out-of-frame Intra-chr p13 118433 ChimerSeq ChiTaRs ChiTaRs P4HB-PLEKHB2 P4HB chr17 79818437 PLEKHB2 chr2 131905344 Exonic hg19 NA DC413827 Out-of-frame Inter-chr q25.3 q21.1 118434 ChimerSeq ChiTaRs ChiTaRs TSPAN9-TNNT1 TSPAN9 chr12 3320844 TNNT1 chr19 55649415 Exonic hg19 NA AA195942 Out-of-frame Inter-chr p13.33 q13.42 118435 ChimerSeq ChiTaRs ChiTaRs TBC1D2B-YIPF1 TBC1D2B chr15 78317639 YIPF1 chr1 54317406 Exonic hg19 NA BC094812 Out-of-frame Inter-chr q25.1 p32.3 118436 ChimerSeq ChiTaRs ChiTaRs SLTM-C6orf89 SLTM chr15 59225780 C6orf89 chr6 36862276 Exonic hg19 NA DB216780 Out-of-frame Inter-chr q22.1 p21.2 118437 ChimerSeq ChiTaRs ChiTaRs MYH9-CD81 MYH9 chr22 36697174 CD81 chr11 2418570 Exonic hg19 NA CN400362 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene p15.5 118438 ChimerSeq ChiTaRs ChiTaRs CHD2-POLI CHD2 chr15 93444530 POLI chr18 51797728 Exonic hg19 NA BC142730 Out-of-frame Inter-chr q26.1 q21.2 118439 ChimerSeq ChiTaRs ChiTaRs RPN2-MED15 RPN2 chr20 35835842 MED15 chr22 20861958 Exonic hg19 NA CF125171 Out-of-frame Inter-chr q11.23 q11.21 118440 ChimerSeq ChiTaRs ChiTaRs HDAC5-PTPN11 HDAC5 chr17 42200997 PTPN11 chr12 112945636 Exonic hg19 NA CB044121 Out-of-frame Inter-chr q21.31 q24.13 Oncogene Tumor suppressor gene 118441 ChimerSeq ChiTaRs ChiTaRs CDC37-TKT CDC37 chr19 10501909 TKT chr3 53269069 Exonic hg19 NA BF002266 Out-of-frame Inter-chr p13.2 p21.1 Tumor suppressor gene 118442 ChimerSeq ChiTaRs ChiTaRs PPP6R3-DPP3 PPP6R3 chr11 68228296 DPP3 chr11 66276546 Exonic hg19 NA DA735996 Out-of-frame Intra-chr q13.2 q13.2 118443 ChimerSeq ChiTaRs ChiTaRs APOL6-FAU APOL6 chr22 36058545 FAU chr11 64888106 Exonic hg19 NA BG251227 Out-of-frame Inter-chr q12.3 q13.1 118444 ChimerSeq ChiTaRs ChiTaRs UBC-GNA12 UBC chr12 125398320 GNA12 chr7 2826934 Exonic hg19 NA BE883493 5'UTR-CDS Inter-chr q24.31 p22.2 118445 ChimerSeq ChiTaRs ChiTaRs COASY-LOC100507412 COASY chr17 40714997 LOC100507412 chr? 109705 Exonic hg19 NA BP275946 Out-of-frame Inter-chr q21.2 118446 ChimerSeq ChiTaRs ChiTaRs PTMS-OPN1LW PTMS chr12 6879811 OPN1LW chrX 153424440 Exonic hg19 NA BM688133 Out-of-frame Inter-chr p13.31 q28 118447 ChimerSeq ChiTaRs ChiTaRs PHF12-RBMS1 PHF12 chr17 27251481 RBMS1 chr2 161130556 Exonic hg19 NA CN399833 Out-of-frame Inter-chr q11.2 q24.2 118448 ChimerSeq ChiTaRs ChiTaRs CAPNS1-KLC1 CAPNS1 chr19 36640524 KLC1 chr14 104145849 Exonic hg19 NA BF082024 Out-of-frame Inter-chr q13.12 q32.33 118449 ChimerSeq ChiTaRs ChiTaRs PEBP1-HS6ST1 PEBP1 chr12 118577336 HS6ST1 chr2 129023995 Exonic hg19 NA BQ375227 Out-of-frame Inter-chr q24.23 Tumor suppressor gene q14.3 118450 ChimerSeq ChiTaRs ChiTaRs ABHD12-RAD21 ABHD12 chr20 25280963 RAD21 chr8 117875439 Exonic hg19 NA BG900137 Out-of-frame Inter-chr p11.21 q24.11 118451 ChimerSeq ChiTaRs ChiTaRs PC-MIEN1 PC chr11 66633820 MIEN1 chr17 37885703 Exonic hg19 NA BF894585 CDS-3'UTR Inter-chr q13.2 q12 118452 ChimerSeq ChiTaRs ChiTaRs TAF1D-COASY TAF1D chr11 93465590 COASY chr17 40714169 Exonic hg19 NA DC383781 Out-of-frame Inter-chr q21 q21.2 118453 ChimerSeq ChiTaRs ChiTaRs CSPG4-SON CSPG4 chr15 75977889 SON chr21 34945612 Exonic hg19 NA CD172355 Out-of-frame Inter-chr q24.2 q22.11 Transcription factor 118454 ChimerSeq ChiTaRs ChiTaRs DYRK2-DYRK2 DYRK2 chr12 68055246 DYRK2 chr12 68054890 Exonic hg19 NA C15558 Out-of-frame Intra-chr q15 CMGC:DYRK q15 CMGC:DYRK 118455 ChimerSeq ChiTaRs ChiTaRs H1F0-AHSP H1F0 chr22 38202893 AHSP chr16 31540014 Exonic hg19 NA C02481 Out-of-frame Inter-chr q13.1 p11.2 118456 ChimerSeq ChiTaRs ChiTaRs C14orf2-NKAIN3 C14orf2 chr14 104387855 NKAIN3 chr8 63831541 Exonic hg19 NA AF116639 Out-of-frame Inter-chr q32.33 q12.3 118457 ChimerSeq ChiTaRs ChiTaRs DDX27-PLXNA2 DDX27 chr20 47858635 PLXNA2 chr1 208331159 Exonic hg19 NA DB218823 Out-of-frame Inter-chr q13.13 q32.2 118458 ChimerSeq ChiTaRs ChiTaRs CNPY2-UBL5 CNPY2 chr12 56708690 UBL5 chr19 9940658 Exonic hg19 NA BM743318 Out-of-frame Inter-chr q13.3 p13.2 Tumor suppressor gene 118459 ChimerSeq ChiTaRs ChiTaRs LPCAT2-TXNDC5 LPCAT2 chr16 55617581 TXNDC5 chr6 8014214 Exonic hg19 NA AJ420584 Out-of-frame Inter-chr q12.2 p24.3 118460 ChimerSeq ChiTaRs ChiTaRs PTPN9-BUB3 PTPN9 chr15 75816641 BUB3 chr10 124924563 Exonic hg19 NA BG212872 Out-of-frame Inter-chr q24.2 q26.13 118461 ChimerSeq ChiTaRs ChiTaRs PLCB2-JUP PLCB2 chr15 40585879 JUP chr17 39919423 Exonic hg19 NA BF893068 Out-of-frame Inter-chr q15.1 q21.2 Tumor suppressor gene 118462 ChimerSeq ChiTaRs ChiTaRs LINC00085-SRGN LINC00085 chr19 52208443 SRGN chr10 70863857 Exonic hg19 NA BQ010408 5'UTR-5'UTR Inter-chr q22.1 118463 ChimerSeq ChiTaRs ChiTaRs ACIN1-DTWD2 ACIN1 chr14 23548919 DTWD2 chr5 118309483 Exonic hg19 NA BE819426 Out-of-frame Inter-chr q11.2 q23.1 118464 ChimerSeq ChiTaRs ChiTaRs ELL3-STAR ELL3 chr15 44085212 STAR chr8 38003812 Exonic hg19 NA AV705820 Out-of-frame Inter-chr q15.3 p11.23 Tumor suppressor gene 118465 ChimerSeq ChiTaRs ChiTaRs ATRN-NPIPA1 ATRN chr20 3464433 NPIPA1 chr16 15039500 Exonic hg19 NA AI174699 Out-of-frame Inter-chr p13 118466 ChimerSeq ChiTaRs ChiTaRs WNK1-DNAJC3 WNK1 chr12 994550 DNAJC3 chr13 96361511 Exonic hg19 NA DA727905 Out-of-frame Inter-chr p13.33 q32.1 118467 ChimerSeq ChiTaRs ChiTaRs XRRA1-CCAR2 XRRA1 chr11 74572255 CCAR2 chr8 22462271 Exonic hg19 NA BF762381 Out-of-frame Inter-chr q13.4 p21.3 Tumor suppressor gene 118468 ChimerSeq ChiTaRs ChiTaRs CDS2-CRK CDS2 chr20 5176289 CRK chr17 1325691 Exonic hg19 NA DN999202 Out-of-frame Inter-chr p12.3 p13.3 118469 ChimerSeq ChiTaRs ChiTaRs CALR-MCM3 CALR chr19 13051121 MCM3 chr6 52137100 Exonic hg19 NA BE837730 Out-of-frame Inter-chr p13.13 p12.2 118470 ChimerSeq ChiTaRs ChiTaRs COX6A1-C1orf123 COX6A1 chr12 120878342 C1orf123 chr1 53684958 Exonic hg19 NA AU132176 Out-of-frame Inter-chr q24.31 p32.3 118471 ChimerSeq ChiTaRs ChiTaRs KLK3-GSN KLK3 chr19 51364020 GSN chr9 124074745 Exonic hg19 NA AI686170 3'UTR-CDS Inter-chr q13.33 q33.2 Tumor suppressor gene 118472 ChimerSeq ChiTaRs ChiTaRs RPS9-BAIAP2L1 RPS9 chr19 54711515 BAIAP2L1 chr7 98015706 Exonic hg19 NA BQ924718 3'UTR-CDS Inter-chr q22.1 118473 ChimerSeq ChiTaRs ChiTaRs SDCBP2-ADAR SDCBP2 chr20 1352776 ADAR chr1 154554537 Exonic hg19 NA BQ052493 Out-of-frame Inter-chr p13 q21.3 118474 ChimerSeq ChiTaRs ChiTaRs IVD-PTGES IVD chr15 40711460 PTGES chr9 132500840 Exonic hg19 NA BM797058 Out-of-frame Inter-chr q15.1 q34.11 118475 ChimerSeq ChiTaRs ChiTaRs FBN1-DPYSL3 FBN1 chr15 48707898 DPYSL3 chr5 146770966 Exonic hg19 NA AA330451 Out-of-frame Inter-chr q21.1 q32 118476 ChimerSeq ChiTaRs ChiTaRs ZFYVE1-MBP ZFYVE1 chr14 73437556 MBP chr18 74728787 Exonic hg19 NA DA272659 3'UTR-CDS Inter-chr q24.2 q23 118477 ChimerSeq ChiTaRs ChiTaRs ELL-HERC2P7 ELL chr19 18632867 HERC2P7 chr15 23390722 Exonic hg19 NA BG282592 Out-of-frame Inter-chr p13.11 118478 ChimerSeq ChiTaRs ChiTaRs COL1A1-TCF25 COL1A1 chr17 48261589 TCF25 chr16 89940209 Exonic hg19 NA AA063543 Out-of-frame Inter-chr q21.33 Oncogene q24.3 118479 ChimerSeq ChiTaRs ChiTaRs ERP27-SPTA1 ERP27 chr12 15067457 SPTA1 chr1 158607854 Exonic hg19 NA AI051248 Out-of-frame Inter-chr p12.3 q23.1 118480 ChimerSeq ChiTaRs ChiTaRs ARL2BP-PAXBP1 ARL2BP chr16 57280053 PAXBP1 chr21 34120980 Exonic hg19 NA DA287704 Out-of-frame Inter-chr q13 118481 ChimerSeq ChiTaRs ChiTaRs HECTD1-HCFC1R1 HECTD1 chr14 31578873 HCFC1R1 chr16 3072920 Exonic hg19 NA BM840752 Out-of-frame Inter-chr q12 p13.3 118482 ChimerSeq ChiTaRs ChiTaRs LRRC23-CAMKK2 LRRC23 chr12 7015826 CAMKK2 chr12 121691186 Exonic hg19 NA DA116260 In-Frame Intra-chr p13.31 q24.31 118483 ChimerSeq ChiTaRs ChiTaRs THSD1-LARS THSD1 chr13 52971843 LARS chr5 145536993 Exonic hg19 NA BE087245 Out-of-frame Inter-chr q14.3 Tumor suppressor gene q32 118484 ChimerSeq ChiTaRs ChiTaRs NR4A1-IFRD2 NR4A1 chr12 52451160 IFRD2 chr3 50326151 Exonic hg19 NA BF915953 Out-of-frame Inter-chr q13.13 Tumor suppressor gene Transcription factor p21.31 118485 ChimerSeq ChiTaRs ChiTaRs SMAD2-PGAM1 SMAD2 chr18 45454544 PGAM1 chr10 99186037 Exonic hg19 NA AK125057 Out-of-frame Inter-chr q21.1 Oncogene Tumor suppressor gene q24.1 118486 ChimerSeq ChiTaRs ChiTaRs HIRA-PHF19 HIRA chr22 19431253 PHF19 chr9 123618761 Exonic hg19 NA BE930554 Out-of-frame Inter-chr q11.21 Tumor suppressor gene q33.2 118487 ChimerSeq ChiTaRs ChiTaRs RAB11B-SLC5A6 RAB11B chr19 8469213 SLC5A6 chr2 27423959 Exonic hg19 NA BQ022479 Out-of-frame Inter-chr p13.2 p23.3 118488 ChimerSeq ChiTaRs ChiTaRs RPL38-TEK RPL38 chr17 72206054 TEK chr9 27185554 Exonic hg19 NA R50162 Out-of-frame Inter-chr q25.1 p21.2 118489 ChimerSeq ChiTaRs ChiTaRs TNNT1-TSPAN9 TNNT1 chr19 55658539 TSPAN9 chr12 3320769 Exonic hg19 NA AA196054 Out-of-frame Inter-chr q13.42 p13.33 118490 ChimerSeq ChiTaRs ChiTaRs VPS13C-RAPGEF1 VPS13C chr15 62352576 RAPGEF1 chr9 134494520 Exonic hg19 NA DA122668 Out-of-frame Inter-chr q22.2 q34.13 118491 ChimerSeq ChiTaRs ChiTaRs JUND-LOC100499227 JUND chr19 18391078 LOC100499227 chr11 119290855 Exonic hg19 NA BU628666 Out-of-frame Inter-chr p13.11 Transcription factor 118492 ChimerSeq ChiTaRs ChiTaRs NMRAL1-B4GALT1 NMRAL1 chr16 4513791 B4GALT1 chr9 33111228 Exonic hg19 NA EC510108 Out-of-frame Inter-chr p13.3 p21.1 118493 ChimerSeq ChiTaRs ChiTaRs BABAM1-MALAT1 BABAM1 chr19 17378339 MALAT1 chr11 65266978 Exonic hg19 NA DW420833 Out-of-frame Inter-chr p13.11 q13.1 118494 ChimerSeq ChiTaRs ChiTaRs TMEM107-SLC35A2 TMEM107 chr17 8076906 SLC35A2 chrX 48763723 Exonic hg19 NA DA799238 Out-of-frame Inter-chr p13.1 p11.23 118495 ChimerSeq ChiTaRs ChiTaRs BCL2L12-LENG8 BCL2L12 chr19 50177170 LENG8 chr19 54968998 Exonic hg19 NA AW005662 Out-of-frame Intra-chr q13.33 118496 ChimerSeq ChiTaRs ChiTaRs NUMA1-LSM10 NUMA1 chr11 71727558 LSM10 chr1 36859037 Exonic hg19 NA BQ669701 Out-of-frame Inter-chr q13.4 Oncogene p34.3 118497 ChimerSeq ChiTaRs ChiTaRs RDX-NXPH4 RDX chr11 110104190 NXPH4 chr12 57619730 Exonic hg19 NA BX097025 Out-of-frame Inter-chr q22.3 q13.3 118498 ChimerSeq ChiTaRs ChiTaRs RPLP1-DMD RPLP1 chr15 69747885 DMD chrX 31165430 Exonic hg19 NA BU624867 Out-of-frame Inter-chr q23 p21.1 Tumor suppressor gene 118499 ChimerSeq ChiTaRs ChiTaRs NUMA1-MIOX NUMA1 chr11 71778613 MIOX chr22 50925300 Exonic hg19 NA AF230095 Out-of-frame Inter-chr q13.4 Oncogene q13.33 118500 ChimerSeq ChiTaRs ChiTaRs PPP6R2-UBE2B PPP6R2 chr22 50810579 UBE2B chr5 133707260 Exonic hg19 NA DN602328 5'UTR-5'UTR Inter-chr q13.33 q31.1 118501 ChimerSeq ChiTaRs ChiTaRs RPS21-XIST RPS21 chr20 60963578 XIST chrX 73069526 Exonic hg19 NA AV751221 Out-of-frame Inter-chr q13.33 q13.2 Tumor suppressor gene 118502 ChimerSeq ChiTaRs ChiTaRs RNASE1-B2M RNASE1 chr14 21271006 B2M chr15 45010080 Exonic hg19 NA DA974342 Out-of-frame Inter-chr q11.2 Oncogene 118503 ChimerSeq ChiTaRs ChiTaRs UNC119-PNPLA2 UNC119 chr17 26875703 PNPLA2 chr11 825127 Exonic hg19 NA AV703000 Out-of-frame Inter-chr q11.2 p15.5 118504 ChimerSeq ChiTaRs ChiTaRs TENC1-TPT1 TENC1 chr12 53457712 TPT1 chr13 45914134 Exonic hg19 NA BU949373 Out-of-frame Inter-chr q14.13 118505 ChimerSeq ChiTaRs ChiTaRs LYZ-HINT3 LYZ chr12 69748014 HINT3 chr6 126300408 Exonic hg19 NA BM993497 Out-of-frame Inter-chr q15 q22.32 118506 ChimerSeq ChiTaRs ChiTaRs GSK3A-IGFBP3 GSK3A chr19 42735021 IGFBP3 chr7 45952233 Exonic hg19 NA W04328 Out-of-frame Inter-chr q13.2 CMGC:GSK p12.3 Tumor suppressor gene 118507 ChimerSeq ChiTaRs ChiTaRs TUBB3-IGFBP7 TUBB3 chr16 90002498 IGFBP7 chr4 57898689 Exonic hg19 NA AI148209 Out-of-frame Inter-chr q24.3 q12 Tumor suppressor gene 118508 ChimerSeq ChiTaRs ChiTaRs ZFYVE21-BACH1 ZFYVE21 chr14 104200005 BACH1 chr21 30698738 Exonic hg19 NA AI652927 3'UTR-CDS Inter-chr q32.33 q21.3 Transcription factor 118509 ChimerSeq ChiTaRs ChiTaRs TNNC2-PRMT2 TNNC2 chr20 44455938 PRMT2 chr21 48084459 Exonic hg19 NA AA424232 Out-of-frame Inter-chr q13.12 q22.3 118510 ChimerSeq ChiTaRs ChiTaRs DCAKD-BTN2A1 DCAKD chr17 43107738 BTN2A1 chr6 26463653 Exonic hg19 NA H67836 Out-of-frame Inter-chr q21.31 p22.2 118511 ChimerSeq ChiTaRs ChiTaRs CDK2AP2-HOOK2 CDK2AP2 chr11 67274442 HOOK2 chr19 12884383 Exonic hg19 NA BU632318 Out-of-frame Inter-chr q13.2 p13.13 118512 ChimerSeq ChiTaRs ChiTaRs TXNL4B-SLC22A3 TXNL4B chr16 72090457 SLC22A3 chr6 160872867 Exonic hg19 NA BG568915 Out-of-frame Inter-chr q22.2 q25.3 118513 ChimerSeq ChiTaRs ChiTaRs ANAPC5-G6PD ANAPC5 chr12 121746247 G6PD chrX 153760136 Exonic hg19 NA CA419747 Out-of-frame Inter-chr q24.31 q28 Oncogene 118514 ChimerSeq ChiTaRs ChiTaRs BCL11B-BCL11B BCL11B chr14 99655846 BCL11B chr14 99655477 Exonic hg19 NA EL582407 Out-of-frame Intra-chr q32.2 Oncogene Transcription factor q32.2 Oncogene Transcription factor 118515 ChimerSeq ChiTaRs ChiTaRs FTL-GBP4 FTL chr19 49468813 GBP4 chr1 89647456 Exonic hg19 NA BC050625 Out-of-frame Inter-chr q13.33 p22.2 118516 ChimerSeq ChiTaRs ChiTaRs DCXR-CALM1 DCXR chr17 79994181 CALM1 chr14 90873731 Exonic hg19 NA AI141454 Out-of-frame Inter-chr q25.3 q32.11 118517 ChimerSeq ChiTaRs ChiTaRs MIR100HG-UPF2 MIR100HG chr11 121972413 UPF2 chr10 12046668 Exonic hg19 NA DA212995 Out-of-frame Inter-chr q24.1 p14 118518 ChimerSeq ChiTaRs ChiTaRs RPL13A-KAZN RPL13A chr19 49995386 KAZN chr1 15306034 Exonic hg19 NA BP333446 Out-of-frame Inter-chr q13.33 p36.21 118519 ChimerSeq ChiTaRs ChiTaRs UHRF1BP1L-PXK UHRF1BP1L chr12 100536626 PXK chr3 58351599 Exonic hg19 NA BC108670 Out-of-frame Inter-chr q23.1 p14.3 118520 ChimerSeq ChiTaRs ChiTaRs PRPF8-RPL37A PRPF8 chr17 1582127 RPL37A chr2 217363988 Exonic hg19 NA BG478185 Out-of-frame Inter-chr q35 118521 ChimerSeq ChiTaRs ChiTaRs GPALPP1-PRKCQ GPALPP1 chr13 45563879 PRKCQ chr10 6506273 Exonic hg19 NA DB496957 Out-of-frame Inter-chr q14.12 p15.1 118522 ChimerSeq ChiTaRs ChiTaRs ANKRD40-ELP2 ANKRD40 chr17 48778051 ELP2 chr18 33709887 Exonic hg19 NA AU125685 Out-of-frame Inter-chr q21.33 q12.2 118523 ChimerSeq ChiTaRs ChiTaRs CNN1-DYNLRB1 CNN1 chr19 11660852 DYNLRB1 chr20 33128625 Exonic hg19 NA BG107757 Out-of-frame Inter-chr p13.2 Tumor suppressor gene q11.22 118524 ChimerSeq ChiTaRs ChiTaRs C16orf52-CLU C16orf52 chr16 22098623 CLU chr8 27455513 Exonic hg19 NA DR421724 Out-of-frame Inter-chr p21.1 Tumor suppressor gene 118525 ChimerSeq ChiTaRs ChiTaRs KIFC3-CANX KIFC3 chr16 57792401 CANX chr5 179157500 Exonic hg19 NA BM726297 Out-of-frame Inter-chr q21 118526 ChimerSeq ChiTaRs ChiTaRs ZNF480-EIF2S3 ZNF480 chr19 52824975 EIF2S3 chrX 24096214 Exonic hg19 NA CB131978 Out-of-frame Inter-chr q13.41 Transcription factor p22.11 118527 ChimerSeq ChiTaRs ChiTaRs ITPK1-EHBP1L1 ITPK1 chr14 93581547 EHBP1L1 chr11 65343564 Exonic hg19 NA BC083510 Out-of-frame Inter-chr q13.1 118528 ChimerSeq ChiTaRs ChiTaRs DENR-RAB31 DENR chr12 123254534 RAB31 chr18 9775283 Exonic hg19 NA BF923604 Out-of-frame Inter-chr q24.31 p11.22 118529 ChimerSeq ChiTaRs ChiTaRs SNX5-SLC35C2 SNX5 chr20 17943581 SLC35C2 chr20 44987095 Exonic hg19 NA DA789110 Out-of-frame Intra-chr p11.23 q13.12 118530 ChimerSeq ChiTaRs ChiTaRs MAP2K2-MALAT1 MAP2K2 chr19 4090373 MALAT1 chr11 65270488 Exonic hg19 NA W37336 Out-of-frame Inter-chr p13.3 STE:STE7 Oncogene q13.1 118531 ChimerSeq ChiTaRs ChiTaRs PRKCB-LEMD2 PRKCB chr16 24104212 LEMD2 chr6 33739175 Exonic hg19 NA AA643921 Out-of-frame Inter-chr p12.2 Tumor suppressor gene p21.31 118532 ChimerSeq ChiTaRs ChiTaRs RRBP1-UBXN4 RRBP1 chr20 17594380 UBXN4 chr2 136541013 Exonic hg19 NA AA429648 Out-of-frame Inter-chr p12.1 q21.3 118533 ChimerSeq ChiTaRs ChiTaRs TUBG2-TUBB4A TUBG2 chr17 40818876 TUBB4A chr19 6494553 Exonic hg19 NA AW953448 Out-of-frame Inter-chr q21.2 p13.3 118534 ChimerSeq ChiTaRs ChiTaRs LDHB-BCAR1 LDHB chr12 21791311 BCAR1 chr16 75276496 Exonic hg19 NA BM819257 Out-of-frame Inter-chr p12.1 q23.1 118535 ChimerSeq ChiTaRs ChiTaRs MALAT1-HNRNPUL1 MALAT1 chr11 65267891 HNRNPUL1 chr19 41812660 Exonic hg19 NA AV757323 Out-of-frame Inter-chr q13.1 q13.2 118536 ChimerSeq ChiTaRs ChiTaRs C22orf24-GLIPR2 C22orf24 chr22 32352253 GLIPR2 chr9 36163705 Exonic hg19 NA BF969911 Out-of-frame Inter-chr q12.3 p13.3 118537 ChimerSeq ChiTaRs ChiTaRs PSME2-ANKRD46 PSME2 chr14 24614674 ANKRD46 chr8 101534418 Exonic hg19 NA AV652105 CDS-3'UTR Inter-chr q12 q22.3 118538 ChimerSeq ChiTaRs ChiTaRs MAPK1-RFT1 MAPK1 chr22 22117132 RFT1 chr3 53126586 Exonic hg19 NA AW376334 Out-of-frame Inter-chr q11.22 Oncogene p21.1 118539 ChimerSeq ChiTaRs ChiTaRs CNIH-QARS CNIH chr14 54908046 QARS chr3 49135855 Exonic hg19 NA CA487373 Out-of-frame Inter-chr p21.31 118540 ChimerSeq ChiTaRs ChiTaRs TPI1-ILF3 TPI1 chr12 6979992 ILF3 chr19 10801474 Exonic hg19 NA CA431273 Out-of-frame Inter-chr p13.31 p13.2 118541 ChimerSeq ChiTaRs ChiTaRs BLCAP-PTPRN2 BLCAP chr20 36149805 PTPRN2 chr7 157364132 Exonic hg19 NA DA346166 Out-of-frame Inter-chr q11.23 Tumor suppressor gene q36.3 118542 ChimerSeq ChiTaRs ChiTaRs RPS6KB1-SNF8 RPS6KB1 chr17 57970687 SNF8 chr17 47021292 Exonic hg19 NA XX000001 Out-of-frame Intra-chr q23.1 Oncogene q21.32 118543 ChimerSeq ChiTaRs ChiTaRs B2M-B2M B2M chr15 45010342 B2M chr15 45009838 Exonic hg19 NA AW088897 Out-of-frame Intra-chr Oncogene Oncogene 118544 ChimerSeq ChiTaRs ChiTaRs DNMT1-MALAT1 DNMT1 chr19 10244223 MALAT1 chr11 65268124 Exonic hg19 NA AI810847 Out-of-frame Inter-chr p13.2 Oncogene Tumor suppressor gene Transcription factor q13.1 118545 ChimerSeq ChiTaRs ChiTaRs RDX-NXPH4 RDX chr11 110104187 NXPH4 chr12 57619730 Exonic hg19 NA R77327 Out-of-frame Inter-chr q22.3 q13.3 118546 ChimerSeq ChiTaRs ChiTaRs PSENEN-PDLIM7 PSENEN chr19 36236602 PDLIM7 chr5 176916799 Exonic hg19 NA DA930054 Out-of-frame Inter-chr q13.12 q35.3 118547 ChimerSeq ChiTaRs ChiTaRs LSM4-ATP11A LSM4 chr19 18417935 ATP11A chr13 113505391 Exonic hg19 NA AA576989 Out-of-frame Inter-chr p13.11 q34 118548 ChimerSeq ChiTaRs ChiTaRs SRRM2-MRPL15 SRRM2 chr16 2811863 MRPL15 chr8 55047884 Exonic hg19 NA BG979095 Out-of-frame Inter-chr p13.3 q11.23 118549 ChimerSeq ChiTaRs ChiTaRs SHANK3-TSNARE1 SHANK3 chr22 51160866 TSNARE1 chr8 143396385 Exonic hg19 NA BM174904 Out-of-frame Inter-chr q24.3 118550 ChimerSeq ChiTaRs ChiTaRs AP1G2-PTMS AP1G2 chr14 24032250 PTMS chr12 6880070 Exonic hg19 NA DA570469 Out-of-frame Inter-chr q11.2 p13.31 118551 ChimerSeq ChiTaRs ChiTaRs PICALM-DIAPH1 PICALM chr11 85712201 DIAPH1 chr5 140957792 Exonic hg19 NA AW992389 Out-of-frame Inter-chr q14.2 q31.3 118552 ChimerSeq ChiTaRs ChiTaRs HBA2-PEG10 HBA2 chr16 223587 PEG10 chr7 94298888 Exonic hg19 NA T95813 Out-of-frame Inter-chr p13.3 q21.3 118553 ChimerSeq ChiTaRs ChiTaRs GPALPP1-PRKCQ GPALPP1 chr13 45563879 PRKCQ chr10 6504291 Exonic hg19 NA DB506048 Out-of-frame Inter-chr q14.12 p15.1 118554 ChimerSeq ChiTaRs ChiTaRs SAFB-C2orf61 SAFB chr19 5653360 C2orf61 chr2 47388952 Exonic hg19 NA BF927057 Out-of-frame Inter-chr p13.3 Tumor suppressor gene Transcription factor 118555 ChimerSeq ChiTaRs ChiTaRs RAD51-CDCA5 RAD51 chr15 41022163 CDCA5 chr11 64845137 Exonic hg19 NA AW363804 Out-of-frame Inter-chr q15.1 q13.1 118556 ChimerSeq ChiTaRs ChiTaRs DPP9-ORAI3 DPP9 chr19 4675832 ORAI3 chr16 30965471 Exonic hg19 NA BF436516 Out-of-frame Inter-chr p13.3 p11.2 118557 ChimerSeq ChiTaRs ChiTaRs DRAP1-C17orf76-AS1 DRAP1 chr11 65688948 C17orf76-AS1 chr17 16342352 Exonic hg19 NA U41843 Out-of-frame Inter-chr q13.1 Transcription factor 118558 ChimerSeq ChiTaRs ChiTaRs NPIPB7-GABARAPL1 NPIPB7 chr16 28875269 GABARAPL1 chr12 10370659 Exonic hg19 NA AA296513 Out-of-frame Inter-chr p12.1 p13.2 118559 ChimerSeq ChiTaRs ChiTaRs SLC2A11-ATN1 SLC2A11 chr22 24225139 ATN1 chr12 7045468 Exonic hg19 NA BM668479 Out-of-frame Inter-chr q11.23 p13.31 118560 ChimerSeq ChiTaRs ChiTaRs ATP5A1-TSC22D1 ATP5A1 chr18 43678262 TSC22D1 chr13 45149664 Exonic hg19 NA DA496129 Out-of-frame Inter-chr q21.1 q14.11 Tumor suppressor gene Transcription factor 118561 ChimerSeq ChiTaRs ChiTaRs PCSK7-XPO6 PCSK7 chr11 117100334 XPO6 chr16 28175523 Exonic hg19 NA BF478188 Out-of-frame Inter-chr q23.3 p12.1 118562 ChimerSeq ChiTaRs ChiTaRs MTSS1L-SAMD9L MTSS1L chr16 70695216 SAMD9L chr7 92760330 Exonic hg19 NA AW298142 Out-of-frame Inter-chr q22.1 q21.2 Tumor suppressor gene 118563 ChimerSeq ChiTaRs ChiTaRs ZNF286B-TCF4 ZNF286B chr17 18571776 TCF4 chr18 52891488 Exonic hg19 NA W95823 Out-of-frame Inter-chr p11.2 Transcription factor q21.2 Tumor suppressor gene Transcription factor 118564 ChimerSeq ChiTaRs ChiTaRs TBC1D2B-YIPF1 TBC1D2B chr15 78317639 YIPF1 chr1 54320674 Exonic hg19 NA BM043998 Out-of-frame Inter-chr q25.1 p32.3 118565 ChimerSeq ChiTaRs ChiTaRs SIPA1L1-EPB41 SIPA1L1 chr14 72196986 EPB41 chr1 29445944 Exonic hg19 NA CB857782 Out-of-frame Inter-chr q24.2 p35.3 Tumor suppressor gene 118566 ChimerSeq ChiTaRs ChiTaRs ZNF566-EFTUD2 ZNF566 chr19 36980404 EFTUD2 chr17 42941060 Exonic hg19 NA CX753702 Out-of-frame Inter-chr q13.12 Transcription factor q21.31 118567 ChimerSeq ChiTaRs ChiTaRs SRRM2-LTF SRRM2 chr16 2817923 LTF chr3 46477496 Exonic hg19 NA BF343490 Out-of-frame Inter-chr p13.3 p21.31 Oncogene Tumor suppressor gene Transcription factor 118568 ChimerSeq ChiTaRs ChiTaRs NAPB-ZFP91 NAPB chr20 23356558 ZFP91 chr11 58378490 Exonic hg19 NA BQ379630 Out-of-frame Inter-chr p11.21 q12.1 Transcription factor 118569 ChimerSeq ChiTaRs ChiTaRs RPS6KA5-DDX24 RPS6KA5 chr14 91526948 DDX24 chr14 94528442 Exonic hg19 NA BQ642898 5'UTR-CDS Intra-chr q32.11 118570 ChimerSeq ChiTaRs ChiTaRs KLK3-MALAT1 KLK3 chr19 51363831 MALAT1 chr11 65266528 Exonic hg19 NA BF680981 Out-of-frame Inter-chr q13.33 q13.1 118571 ChimerSeq ChiTaRs ChiTaRs ERBB2-RABGAP1 ERBB2 chr17 37881986 RABGAP1 chr9 125852605 Exonic hg19 NA AW371253 Out-of-frame Inter-chr q12 Oncogene q33.2 118572 ChimerSeq ChiTaRs ChiTaRs MEG3-MADD MEG3 chr14 101295418 MADD chr11 47351092 Exonic hg19 NA AV707488 Out-of-frame Inter-chr q32.2 Tumor suppressor gene p11.2 Tumor suppressor gene 118573 ChimerSeq ChiTaRs ChiTaRs MMP2-HNRNPA2B1 MMP2 chr16 55539722 HNRNPA2B1 chr7 26231838 Exonic hg19 NA BG501102 Out-of-frame Inter-chr q12.2 Oncogene p15.2 118574 ChimerSeq ChiTaRs ChiTaRs AAAS-FKBP6 AAAS chr12 53701290 FKBP6 chr7 72738395 Exonic hg19 NA AW205219 Out-of-frame Inter-chr q13.13 q11.23 118575 ChimerSeq ChiTaRs ChiTaRs EIF3D-UCP2 EIF3D chr22 36925170 UCP2 chr11 73689426 Exonic hg19 NA BE260321 Out-of-frame Inter-chr q12.3 q13.4 118576 ChimerSeq ChiTaRs ChiTaRs KIAA0195-ZFP90 KIAA0195 chr17 73482051 ZFP90 chr16 68599803 Exonic hg19 NA DA249454 Out-of-frame Inter-chr q22.1 Transcription factor 118577 ChimerSeq ChiTaRs ChiTaRs POLE-HMGCL POLE chr12 133254307 HMGCL chr1 24128377 Exonic hg19 NA AB209902 Out-of-frame Inter-chr q24.33 p36.11 118578 ChimerSeq ChiTaRs ChiTaRs TCF3-NFKBIA TCF3 chr19 1622415 NFKBIA chr14 35870833 Exonic hg19 NA BE874494 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor q13.2 118579 ChimerSeq ChiTaRs ChiTaRs ANP32A-MIR548F1 ANP32A chr15 69076935 MIR548F1 chr1 186283023 Exonic hg19 NA AI990804 Out-of-frame Inter-chr q23 Tumor suppressor gene q21.1 118580 ChimerSeq ChiTaRs ChiTaRs RMI2-PLOD1 RMI2 chr16 11375176 PLOD1 chr1 12012738 Exonic hg19 NA AL079828 Out-of-frame Inter-chr p13.13 p36.22 118581 ChimerSeq ChiTaRs ChiTaRs AP3D1-HSP90AA1 AP3D1 chr19 2117361 HSP90AA1 chr14 102551204 Exonic hg19 NA BU171479 Out-of-frame Inter-chr p13.3 q32.31 Oncogene 118582 ChimerSeq ChiTaRs ChiTaRs SCYL1-COL1A1 SCYL1 chr11 65300218 COL1A1 chr17 48268225 Exonic hg19 NA BF926669 Out-of-frame Inter-chr q13.1 Other:SCY1 Tumor suppressor gene q21.33 Oncogene 118583 ChimerSeq ChiTaRs ChiTaRs FAM63B-KIAA0195 FAM63B chr15 59063589 KIAA0195 chr17 73489105 Exonic hg19 NA DA522272 Out-of-frame Inter-chr 118584 ChimerSeq ChiTaRs ChiTaRs ST13-SKIV2L2 ST13 chr22 41221865 SKIV2L2 chr5 54720936 Exonic hg19 NA AW794507 Out-of-frame Inter-chr q13.2 Tumor suppressor gene q11.2 118585 ChimerSeq ChiTaRs ChiTaRs CD27-SON CD27 chr12 6562443 SON chr21 34925063 Exonic hg19 NA DB201269 Out-of-frame Inter-chr p13.31 q22.11 Transcription factor 118586 ChimerSeq ChiTaRs ChiTaRs RNASEK-C17orf49-PRPF8 RNASEK-C17orf49 chr17 6917851 PRPF8 chr17 1579845 Exonic hg19 NA CA308327 Out-of-frame Intra-chr p13.1 118587 ChimerSeq ChiTaRs ChiTaRs CTU2-PRKAR2A CTU2 chr16 88779212 PRKAR2A chr3 48785605 Exonic hg19 NA AK299521 Out-of-frame Inter-chr q24.3 p21.31 118588 ChimerSeq ChiTaRs ChiTaRs TMEM91-PI4KAP2 TMEM91 chr19 41870002 PI4KAP2 chr22 21842193 Exonic hg19 NA DA489184 Out-of-frame Inter-chr q13.2 q11.21 118589 ChimerSeq ChiTaRs ChiTaRs SLPI-ARHGAP10 SLPI chr20 43883204 ARHGAP10 chr4 148963229 Exonic hg19 NA DB057222 Out-of-frame Inter-chr q13.12 q31.23 118590 ChimerSeq ChiTaRs ChiTaRs CALM1-PSME3 CALM1 chr14 90872488 PSME3 chr17 40995163 Exonic hg19 NA BF218294 Out-of-frame Inter-chr q32.11 q21.31 118591 ChimerSeq ChiTaRs ChiTaRs NHP2L1-RARA NHP2L1 chr22 42071051 RARA chr17 38513367 Exonic hg19 NA AA329128 Out-of-frame Inter-chr q21.2 Oncogene Transcription factor 118592 ChimerSeq ChiTaRs ChiTaRs MIR5095-CTBP2 MIR5095 chr20 55983349 CTBP2 chr10 126686538 Exonic hg19 NA AU134210 Out-of-frame Inter-chr p32.3 q26.13 118593 ChimerSeq ChiTaRs ChiTaRs NCOA3-TXNDC5 NCOA3 chr20 46130763 TXNDC5 chr6 7899876 Exonic hg19 NA DB144841 5'UTR-CDS Inter-chr q13.12 Transcription factor p24.3 118594 ChimerSeq ChiTaRs ChiTaRs RB1-MICAL1 RB1 chr13 48986614 MICAL1 chr6 109768348 Exonic hg19 NA AL048511 Out-of-frame Inter-chr q14.2 Oncogene Tumor suppressor gene q21 118595 ChimerSeq ChiTaRs ChiTaRs HELZ-P4HB HELZ chr17 65069671 P4HB chr17 79801037 Exonic hg19 NA BE878135 Out-of-frame Intra-chr q24.2 q25.3 118596 ChimerSeq ChiTaRs ChiTaRs PRPSAP2-MR1 PRPSAP2 chr17 18759743 MR1 chr1 181018187 Exonic hg19 NA CD244248 5'UTR-CDS Inter-chr p11.2 q25.3 118597 ChimerSeq ChiTaRs ChiTaRs MKKS-TMEM45A MKKS chr20 10393821 TMEM45A chr3 100296086 Exonic hg19 NA BQ376956 Out-of-frame Inter-chr p12.2 q12.2 118598 ChimerSeq ChiTaRs ChiTaRs PTTG1IP-PLP1 PTTG1IP chr21 46285138 PLP1 chrX 103031845 Exonic hg19 NA DA415824 Out-of-frame Inter-chr q22.3 q22.2 118599 ChimerSeq ChiTaRs ChiTaRs SCYL2-PTPRG SCYL2 chr12 100733190 PTPRG chr3 61728099 Exonic hg19 NA AK027551 Out-of-frame Inter-chr q23.1 Other:SCY1 p14.2 118600 ChimerSeq ChiTaRs ChiTaRs TMEM107-MBP TMEM107 chr17 8076906 MBP chr18 74700450 Exonic hg19 NA DB178316 3'UTR-CDS Inter-chr p13.1 q23 118601 ChimerSeq ChiTaRs ChiTaRs PSME2-ANKRD46 PSME2 chr14 24614674 ANKRD46 chr8 101534602 Exonic hg19 NA AV651374 CDS-3'UTR Inter-chr q12 q22.3 118602 ChimerSeq ChiTaRs ChiTaRs SULT2A1-SERPINC1 SULT2A1 chr19 48374252 SERPINC1 chr1 173872947 Exonic hg19 NA AF130100 Out-of-frame Inter-chr q13.33 q25.1 118603 ChimerSeq ChiTaRs ChiTaRs HOXB3-PTPRA HOXB3 chr17 46667600 PTPRA chr20 2903853 Exonic hg19 NA DA748390 Out-of-frame Inter-chr q21.32 Transcription factor p13 118604 ChimerSeq ChiTaRs ChiTaRs GLTSCR2-TMEM63A GLTSCR2 chr19 48249041 TMEM63A chr1 226040294 Exonic hg19 NA BM561692 Out-of-frame Inter-chr Tumor suppressor gene q42.12 118605 ChimerSeq ChiTaRs ChiTaRs CRLF3-ARHGEF6 CRLF3 chr17 29111031 ARHGEF6 chrX 135748485 Exonic hg19 NA AA236755 Out-of-frame Inter-chr q11.2 q26.3 118606 ChimerSeq ChiTaRs ChiTaRs CKM-MYOZ2 CKM chr19 45826133 MYOZ2 chr4 120079264 Exonic hg19 NA BF693845 Out-of-frame Inter-chr q13.32 q26 118607 ChimerSeq ChiTaRs ChiTaRs PRKCSH-ENC1 PRKCSH chr19 11561783 ENC1 chr5 73931210 Exonic hg19 NA AI467862 Out-of-frame Inter-chr p13.2 q13.3 118608 ChimerSeq ChiTaRs ChiTaRs FARP1-DKK3 FARP1 chr13 99102023 DKK3 chr11 11986101 Exonic hg19 NA BF223276 3'UTR-CDS Inter-chr q32.2 p15.3 Tumor suppressor gene 118609 ChimerSeq ChiTaRs ChiTaRs FRS2-COPA FRS2 chr12 69874139 COPA chr1 160264301 Exonic hg19 NA DA732632 5'UTR-CDS Inter-chr q15 q23.2 118610 ChimerSeq ChiTaRs ChiTaRs FTL-ADAR FTL chr19 49468804 ADAR chr1 154556500 Exonic hg19 NA AA157368 Out-of-frame Inter-chr q13.33 q21.3 118611 ChimerSeq ChiTaRs ChiTaRs HSPA8-STX3 HSPA8 chr11 122931356 STX3 chr11 59569219 Exonic hg19 NA BQ362492 Out-of-frame Intra-chr q24.1 q12.1 118612 ChimerSeq ChiTaRs ChiTaRs EIF3L-MTUS1 EIF3L chr22 38247497 MTUS1 chr8 17541953 Exonic hg19 NA DA039338 Out-of-frame Inter-chr q13.1 p22 Tumor suppressor gene 118613 ChimerSeq ChiTaRs ChiTaRs RUNX1-USP25 RUNX1 chr21 36421196 USP25 chr21 17163821 Exonic hg19 NA AF419247 Out-of-frame Intra-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q21.1 118614 ChimerSeq ChiTaRs ChiTaRs HECTD1-HCFC1R1 HECTD1 chr14 31578873 HCFC1R1 chr16 3072930 Exonic hg19 NA BM840100 Out-of-frame Inter-chr q12 p13.3 118615 ChimerSeq ChiTaRs ChiTaRs PACS2-MAP3K12 PACS2 chr14 105843177 MAP3K12 chr12 53881783 Exonic hg19 NA BE184465 Out-of-frame Inter-chr q32.33 q13.13 118616 ChimerSeq ChiTaRs ChiTaRs ZC3H7B-CARKD ZC3H7B chr22 41756104 CARKD chr13 111267934 Exonic hg19 NA BC000577 Out-of-frame Inter-chr q13.2 118617 ChimerSeq ChiTaRs ChiTaRs BCL2L1-TOR3A BCL2L1 chr20 30253497 TOR3A chr1 179051374 Exonic hg19 NA BQ686301 Out-of-frame Inter-chr q11.21 Oncogene q25.2 118618 ChimerSeq ChiTaRs ChiTaRs ZNF791-HP1BP3 ZNF791 chr19 12740363 HP1BP3 chr1 21069621 Exonic hg19 NA BG620524 Out-of-frame Inter-chr p13.13 Transcription factor p36.12 118619 ChimerSeq ChiTaRs ChiTaRs PHB2-UBXN4 PHB2 chr12 7074570 UBXN4 chr2 136541517 Exonic hg19 NA AW273094 Out-of-frame Inter-chr p13.31 q21.3 118620 ChimerSeq ChiTaRs ChiTaRs SARS2-RBM33 SARS2 chr19 39423660 RBM33 chr7 155570975 Exonic hg19 NA AI446790 Out-of-frame Inter-chr q36.3 118621 ChimerSeq ChiTaRs ChiTaRs ZNFX1-AS1-SRSF3 ZNFX1-AS1 chr20 47897306 SRSF3 chr6 36562143 Exonic hg19 NA DA615333 Out-of-frame Inter-chr p21.31 Tumor suppressor gene 118622 ChimerSeq ChiTaRs ChiTaRs MALAT1-NASP MALAT1 chr11 65269394 NASP chr1 46073875 Exonic hg19 NA AI133392 Out-of-frame Inter-chr q13.1 p34.1 118623 ChimerSeq ChiTaRs ChiTaRs GNB5-RBM15 GNB5 chr15 52413369 RBM15 chr1 110884368 Exonic hg19 NA AI051816 Out-of-frame Inter-chr q21.2 p13.3 118624 ChimerSeq ChiTaRs ChiTaRs USP16-PRDX1 USP16 chr21 30415890 PRDX1 chr1 45976942 Exonic hg19 NA AI084599 Out-of-frame Inter-chr q21.3 p34.1 118625 ChimerSeq ChiTaRs ChiTaRs LONP1-AZIN1 LONP1 chr19 5720138 AZIN1 chr8 103839229 Exonic hg19 NA X76040 Out-of-frame Inter-chr p13.3 q22.3 118626 ChimerSeq ChiTaRs ChiTaRs DZIP1-PKP4 DZIP1 chr13 96274660 PKP4 chr2 159389687 Exonic hg19 NA AK055823 Out-of-frame Inter-chr q32.1 Transcription factor q24.1 118627 ChimerSeq ChiTaRs ChiTaRs ELL3-PAWR ELL3 chr15 44085945 PAWR chr12 79988161 Exonic hg19 NA BU852279 Out-of-frame Inter-chr q15.3 q21.2 Tumor suppressor gene 118628 ChimerSeq ChiTaRs ChiTaRs PTRF-ATP6V1A PTRF chr17 40556317 ATP6V1A chr3 113529148 Exonic hg19 NA BE392022 Out-of-frame Inter-chr q13.31 118629 ChimerSeq ChiTaRs ChiTaRs AAAS-C15orf39 AAAS chr12 53701314 C15orf39 chr15 75498882 Exonic hg19 NA AI755186 Out-of-frame Inter-chr q13.13 q24.2 118630 ChimerSeq ChiTaRs ChiTaRs RPS9-PSMD4 RPS9 chr19 54711372 PSMD4 chr1 151239761 Exonic hg19 NA BU590293 Out-of-frame Inter-chr q21.3 118631 ChimerSeq ChiTaRs ChiTaRs TPX2-ERGIC1 TPX2 chr20 30347895 ERGIC1 chr5 172379464 Exonic hg19 NA BQ644408 Out-of-frame Inter-chr q11.21 q35.1 118632 ChimerSeq ChiTaRs ChiTaRs HIRA-TG HIRA chr22 19418480 TG chr8 134144161 Exonic hg19 NA BG992571 Out-of-frame Inter-chr q11.21 Tumor suppressor gene q24.22 118633 ChimerSeq ChiTaRs ChiTaRs TP53INP2-RPL34 TP53INP2 chr20 33298208 RPL34 chr4 109543688 Exonic hg19 NA BM810873 Out-of-frame Inter-chr q11.22 q25 118634 ChimerSeq ChiTaRs ChiTaRs MAP4K5-PRKDC MAP4K5 chr14 50945655 PRKDC chr8 48709161 Exonic hg19 NA AK022387 Out-of-frame Inter-chr q22.1 q11.21 Oncogene 118635 ChimerSeq ChiTaRs ChiTaRs CD4-NEAT1 CD4 chr12 6929964 NEAT1 chr11 65191152 Exonic hg19 NA AI948884 Out-of-frame Inter-chr p13.31 Tumor suppressor gene q13.1 118636 ChimerSeq ChiTaRs ChiTaRs PRDX5-MLC1 PRDX5 chr11 64088235 MLC1 chr22 50521515 Exonic hg19 NA DA297249 Out-of-frame Inter-chr q13.1 q13.33 118637 ChimerSeq ChiTaRs ChiTaRs ASB8-ZDBF2 ASB8 chr12 48542498 ZDBF2 chr2 207176772 Exonic hg19 NA CA420576 Out-of-frame Inter-chr q13.11 118638 ChimerSeq ChiTaRs ChiTaRs LOC100130950-ARPP19 LOC100130950 chr17 5118546 ARPP19 chr15 52840147 Exonic hg19 NA CN421035 Out-of-frame Inter-chr q21.2 118639 ChimerSeq ChiTaRs ChiTaRs POC1B-SERPINE1 POC1B chr12 89880753 SERPINE1 chr7 100777049 Exonic hg19 NA D58969 Out-of-frame Inter-chr q21.33 q22.1 118640 ChimerSeq ChiTaRs ChiTaRs LEPREL4-MOAP1 LEPREL4 chr17 39958561 MOAP1 chr14 93649270 Exonic hg19 NA BU624646 Out-of-frame Inter-chr 118641 ChimerSeq ChiTaRs ChiTaRs IRF3-MALAT1 IRF3 chr19 50168973 MALAT1 chr11 65271759 Exonic hg19 NA BF743346 Out-of-frame Inter-chr q13.33 Tumor suppressor gene Transcription factor q13.1 118642 ChimerSeq ChiTaRs ChiTaRs METTL2A-PNO1 METTL2A chr17 60526296 PNO1 chr2 68402173 Exonic hg19 NA AW152574 Out-of-frame Inter-chr q23.2 p14 118643 ChimerSeq ChiTaRs ChiTaRs HSF5-TRAPPC4 HSF5 chr17 56544311 TRAPPC4 chr11 118890877 Exonic hg19 NA AK097630 Out-of-frame Inter-chr q22 Transcription factor 118644 ChimerSeq ChiTaRs ChiTaRs CAPNS1-NOMO1 CAPNS1 chr19 36631950 NOMO1 chr16 14969080 Exonic hg19 NA BQ961689 Out-of-frame Inter-chr q13.12 118645 ChimerSeq ChiTaRs ChiTaRs RASA3-GFAP RASA3 chr13 114766404 GFAP chr17 42990692 Exonic hg19 NA BF923035 Out-of-frame Inter-chr q21.31 118646 ChimerSeq ChiTaRs ChiTaRs STAT6-LPHN2 STAT6 chr12 57505157 LPHN2 chr1 82431797 Exonic hg19 NA AU133039 Out-of-frame Inter-chr q13.3 Transcription factor 118647 ChimerSeq ChiTaRs ChiTaRs TOB2-HNRNPAB TOB2 chr22 41842801 HNRNPAB chr5 177631858 Exonic hg19 NA AK297686 Out-of-frame Inter-chr q13.2 q35.3 118648 ChimerSeq ChiTaRs ChiTaRs TMED2-PPIA TMED2 chr12 124082124 PPIA chr7 44836280 Exonic hg19 NA BM752192 Out-of-frame Inter-chr q24.31 p13 118649 ChimerSeq ChiTaRs ChiTaRs MEN1-RNF44 MEN1 chr11 64578006 RNF44 chr5 175956377 Exonic hg19 NA CN362141 Out-of-frame Inter-chr q13.1 Oncogene Tumor suppressor gene q35.2 118650 ChimerSeq ChiTaRs ChiTaRs C1QTNF1-MAGED4B C1QTNF1 chr17 77045870 MAGED4B chrX 51928004 Exonic hg19 NA CA432009 3'UTR-5'UTR Inter-chr q25.3 p11.22 118651 ChimerSeq ChiTaRs ChiTaRs DPP9-TFIP11 DPP9 chr19 4682749 TFIP11 chr22 26889273 Exonic hg19 NA BF571294 Out-of-frame Inter-chr p13.3 q12.1 118652 ChimerSeq ChiTaRs ChiTaRs RIMBP2-PWWP2B RIMBP2 chr12 130921495 PWWP2B chr10 134231188 Exonic hg19 NA DB532705 Out-of-frame Inter-chr q24.33 q26.3 118653 ChimerSeq ChiTaRs ChiTaRs MAPKBP1-DLGAP1 MAPKBP1 chr15 42092112 DLGAP1 chr18 3534518 Exonic hg19 NA DA318993 In-Frame Inter-chr q15.1 p11.31 118654 ChimerSeq ChiTaRs ChiTaRs SOX5-TGFBR2 SOX5 chr12 24333863 TGFBR2 chr3 30691827 Exonic hg19 NA D50682 Out-of-frame Inter-chr p12.1 Transcription factor p24.1 Oncogene Tumor suppressor gene 118655 ChimerSeq ChiTaRs ChiTaRs MYL2-CCDC120 MYL2 chr12 111348711 CCDC120 chrX 48924910 Exonic hg19 NA AA905650 Out-of-frame Inter-chr q24.11 p11.23 118656 ChimerSeq ChiTaRs ChiTaRs BCAS4-BCAS3 BCAS4 chr20 49411713 BCAS3 chr17 59445686 Exonic hg19 NA BU944756 Out-of-frame Inter-chr q13.13 q23.2 KB Pub 118657 ChimerSeq ChiTaRs ChiTaRs PDIA3-MYO10 PDIA3 chr15 44060746 MYO10 chr5 16701749 Exonic hg19 NA BQ292313 Out-of-frame Inter-chr q15.3 p15.1 118658 ChimerSeq ChiTaRs ChiTaRs VWF-FN1 VWF chr12 6085300 FN1 chr2 216226697 Exonic hg19 NA AW955870 Out-of-frame Inter-chr p13.31 q35 Oncogene 118659 ChimerSeq ChiTaRs ChiTaRs TTLL5-CXADR TTLL5 chr14 76231116 CXADR chr21 18937743 Exonic hg19 NA DB522390 Out-of-frame Inter-chr q24.3 q21.1 118660 ChimerSeq ChiTaRs ChiTaRs PWRN1-UBN2 PWRN1 chr15 24815275 UBN2 chr7 138921748 Exonic hg19 NA DB068068 5'UTR-CDS Inter-chr q11.2 q34 118661 ChimerSeq ChiTaRs ChiTaRs DAD1-YWHAE DAD1 chr14 23044039 YWHAE chr17 1265241 Exonic hg19 NA AI094624 Out-of-frame Inter-chr q11.2 p13.3 118662 ChimerSeq ChiTaRs ChiTaRs KLC1-C5orf54 KLC1 chr14 104121162 C5orf54 chr5 159822205 Exonic hg19 NA AL134331 In-Frame Inter-chr q32.33 118663 ChimerSeq ChiTaRs ChiTaRs TAPBPL-POM121 TAPBPL chr12 6579811 POM121 chr7 72419941 Exonic hg19 NA BF528396 Out-of-frame Inter-chr p13.31 q11.23 118664 ChimerSeq ChiTaRs ChiTaRs STX16-RNF208 STX16 chr20 57226462 RNF208 chr9 140114708 Exonic hg19 NA BC090061 Out-of-frame Inter-chr q13.32 q34.3 118665 ChimerSeq ChiTaRs ChiTaRs MGA-TMED7-TICAM2 MGA chr15 41961235 TMED7-TICAM2 chr5 114961298 Exonic hg19 NA AA249870 Out-of-frame Inter-chr q15.1 Transcription factor q22.3 118666 ChimerSeq ChiTaRs ChiTaRs MLL-FRYL MLL chr11 118355029 FRYL chr4 48529633 Exonic hg19 NA DQ299939 In-Frame Inter-chr q23.3 p11 118667 ChimerSeq ChiTaRs ChiTaRs CKLF-CMTM1-RHOQ CKLF-CMTM1 chr16 66600699 RHOQ chr2 46770103 Exonic hg19 NA BC013135 Out-of-frame Inter-chr q21 Tumor suppressor gene p21 118668 ChimerSeq ChiTaRs ChiTaRs NFIC-VSTM4 NFIC chr19 3462962 VSTM4 chr10 50315817 Exonic hg19 NA AI291551 Out-of-frame Inter-chr p13.3 Transcription factor q11.23 118669 ChimerSeq ChiTaRs ChiTaRs GABPA-OPCML GABPA chr21 27143516 OPCML chr11 132285875 Exonic hg19 NA DA569674 Out-of-frame Inter-chr q21.3 Transcription factor q25 Tumor suppressor gene 118670 ChimerSeq ChiTaRs ChiTaRs BORA-VCP BORA chr13 73303232 VCP chr9 35062000 Exonic hg19 NA CN311554 Out-of-frame Inter-chr q21.33 p13.3 118671 ChimerSeq ChiTaRs ChiTaRs DAPK2-MAP2K5 DAPK2 chr15 64332457 MAP2K5 chr15 68098982 Exonic hg19 NA AI692764 Out-of-frame Intra-chr q22.31 CAMK:DAPK Tumor suppressor gene q23 STE:STE7 118672 ChimerSeq ChiTaRs ChiTaRs EIF3G-TSEN54 EIF3G chr19 10230560 TSEN54 chr17 73519354 Exonic hg19 NA BU844738 Out-of-frame Inter-chr p13.2 q25.1 118673 ChimerSeq ChiTaRs ChiTaRs TRIB3-NADK2 TRIB3 chr20 368874 NADK2 chr5 36227578 Exonic hg19 NA BP240144 Out-of-frame Inter-chr p13 p13.2 118674 ChimerSeq ChiTaRs ChiTaRs PSME3-LMNB2 PSME3 chr17 40994289 LMNB2 chr19 2430210 Exonic hg19 NA BU527777 Out-of-frame Inter-chr q21.31 p13.3 118675 ChimerSeq ChiTaRs ChiTaRs IFNAR1-CTNNBL1 IFNAR1 chr21 34727789 CTNNBL1 chr20 36326471 Exonic hg19 NA BQ946630 Out-of-frame Inter-chr q22.11 q11.23 118676 ChimerSeq ChiTaRs ChiTaRs FURIN-COTL1 FURIN chr15 91425809 COTL1 chr16 84600290 Exonic hg19 NA BE812237 Out-of-frame Inter-chr q26.1 q24.1 118677 ChimerSeq ChiTaRs ChiTaRs CHD6-TFIP11 CHD6 chr20 40080661 TFIP11 chr22 26902343 Exonic hg19 NA BF932481 Out-of-frame Inter-chr q12 q12.1 118678 ChimerSeq ChiTaRs ChiTaRs DLEU1-ATP5S DLEU1 chr13 51203382 ATP5S chr14 50796720 Exonic hg19 NA X66358 Out-of-frame Inter-chr q14.2 Tumor suppressor gene q21.3 118679 ChimerSeq ChiTaRs ChiTaRs COL1A1-GRAP2 COL1A1 chr17 48261640 GRAP2 chr22 40366908 Exonic hg19 NA AI277343 3'UTR-CDS Inter-chr q21.33 Oncogene q13.1 118680 ChimerSeq ChiTaRs ChiTaRs PTTG1IP-PTTG1IP PTTG1IP chr21 46269923 PTTG1IP chr21 46270003 Exonic hg19 NA BM969022 Out-of-frame Intra-chr q22.3 q22.3 118681 ChimerSeq ChiTaRs ChiTaRs SPG21-NFE2L2 SPG21 chr15 65262538 NFE2L2 chr2 178097293 Exonic hg19 NA DA025613 Out-of-frame Inter-chr q22.31 q31.2 Oncogene Transcription factor 118682 ChimerSeq ChiTaRs ChiTaRs HIRA-PHF19 HIRA chr22 19431265 PHF19 chr9 123618741 Exonic hg19 NA BG002842 Out-of-frame Inter-chr q11.21 Tumor suppressor gene q33.2 118683 ChimerSeq ChiTaRs ChiTaRs MALAT1-MBD3 MALAT1 chr11 65266805 MBD3 chr19 1576831 Exonic hg19 NA AV750455 Out-of-frame Inter-chr q13.1 p13.3 Transcription factor 118684 ChimerSeq ChiTaRs ChiTaRs CLSTN3-EFNB1 CLSTN3 chr12 7311541 EFNB1 chrX 68061430 Exonic hg19 NA CA421658 Out-of-frame Inter-chr p13.31 q13.1 118685 ChimerSeq ChiTaRs ChiTaRs PIP4K2B-APBA3 PIP4K2B chr17 36955987 APBA3 chr19 3751238 Exonic hg19 NA AA972703 Out-of-frame Inter-chr q12 p13.3 118686 ChimerSeq ChiTaRs ChiTaRs KIAA0100-CLCN6 KIAA0100 chr17 26967029 CLCN6 chr1 11896066 Exonic hg19 NA BF745626 Out-of-frame Inter-chr q11.2 p36.22 118687 ChimerSeq ChiTaRs ChiTaRs SERPINH1-TPI1 SERPINH1 chr11 75283826 TPI1 chr12 6979538 Exonic hg19 NA BQ000670 Out-of-frame Inter-chr q13.5 p13.31 118688 ChimerSeq ChiTaRs ChiTaRs MAPK1-PACS1 MAPK1 chr22 22116423 PACS1 chr11 66002824 Exonic hg19 NA AW500869 Out-of-frame Inter-chr q11.22 Oncogene q13.1 118689 ChimerSeq ChiTaRs ChiTaRs MAPK1-ZNF638 MAPK1 chr22 22118034 ZNF638 chr2 71662116 Exonic hg19 NA DB550111 Out-of-frame Inter-chr q11.22 Oncogene p13.3 118690 ChimerSeq ChiTaRs ChiTaRs PLD3-LOC100507412 PLD3 chr19 40872571 LOC100507412 chr? 109584 Exonic hg19 NA BJ997169 Out-of-frame Inter-chr q13.2 118691 ChimerSeq ChiTaRs ChiTaRs SLC12A6-B4GALT5 SLC12A6 chr15 34610988 B4GALT5 chr20 48260099 Exonic hg19 NA DB237731 Out-of-frame Inter-chr q14 q13.13 118692 ChimerSeq ChiTaRs ChiTaRs MTUS2-TMEM8B MTUS2 chr13 30002954 TMEM8B chr9 35834456 Exonic hg19 NA BI756975 Out-of-frame Inter-chr q12.3 p13.3 118693 ChimerSeq ChiTaRs ChiTaRs TUBA1B-ZSCAN29 TUBA1B chr12 49523433 ZSCAN29 chr15 43651109 Exonic hg19 NA CN426333 Out-of-frame Inter-chr q13.12 q15.3 Transcription factor 118694 ChimerSeq ChiTaRs ChiTaRs SIK3-NBPF11 SIK3 chr11 116747770 NBPF11 chr1 148241714 Exonic hg19 NA AW899316 Out-of-frame Inter-chr q23.3 q21.2 118695 ChimerSeq ChiTaRs ChiTaRs PRDX2-LOC100507412 PRDX2 chr19 12912669 LOC100507412 chr? 109416 Exonic hg19 NA BP213893 Out-of-frame Inter-chr p13.13 118696 ChimerSeq ChiTaRs ChiTaRs PTTG1IP-CNIH4 PTTG1IP chr21 46270283 CNIH4 chr1 224553606 Exonic hg19 NA AW374030 Out-of-frame Inter-chr q22.3 q42.11 118697 ChimerSeq ChiTaRs ChiTaRs SDHD-XIRP2 SDHD chr11 111965774 XIRP2 chr2 168106959 Exonic hg19 NA AA213804 Out-of-frame Inter-chr q23.1 Oncogene Tumor suppressor gene q24.3 118698 ChimerSeq ChiTaRs ChiTaRs TSPAN31-IL1R1 TSPAN31 chr12 58142018 IL1R1 chr2 102792838 Exonic hg19 NA AW262008 Out-of-frame Inter-chr q14.1 q11.2 118699 ChimerSeq ChiTaRs ChiTaRs KCNG1-PRNP KCNG1 chr20 49620475 PRNP chr20 4680213 Exonic hg19 NA AI810741 Out-of-frame Intra-chr q13.13 p13 118700 ChimerSeq ChiTaRs ChiTaRs BCL7C-TSC22D1 BCL7C chr16 30899231 TSC22D1 chr13 45008748 Exonic hg19 NA AI342324 Out-of-frame Inter-chr p11.2 q14.11 Tumor suppressor gene Transcription factor 118701 ChimerSeq ChiTaRs ChiTaRs APLP2-PPM1G APLP2 chr11 129992267 PPM1G chr2 27606361 Exonic hg19 NA AA853757 Out-of-frame Inter-chr q24.3 p23.3 118702 ChimerSeq ChiTaRs ChiTaRs MBD2-ARCN1 MBD2 chr18 51715304 ARCN1 chr11 118452058 Exonic hg19 NA X81198 Out-of-frame Inter-chr q21.2 Transcription factor q23.3 118703 ChimerSeq ChiTaRs ChiTaRs FAM165B-TOM1L1 FAM165B chr21 35757850 TOM1L1 chr17 53035459 Exonic hg19 NA CN268166 Out-of-frame Inter-chr q22 118704 ChimerSeq ChiTaRs ChiTaRs IRGQ-RTF1 IRGQ chr19 44093096 RTF1 chr15 41774263 Exonic hg19 NA BM541733 Out-of-frame Inter-chr q13.31 q15.1 118705 ChimerSeq ChiTaRs ChiTaRs RPAIN-ZBTB17 RPAIN chr17 5336199 ZBTB17 chr1 16284233 Exonic hg19 NA BM983052 Out-of-frame Inter-chr p13.2 p36.13 Transcription factor 118706 ChimerSeq ChiTaRs ChiTaRs ITPR2-HOMER1 ITPR2 chr12 26833562 HOMER1 chr5 78671747 Exonic hg19 NA AK122857 Out-of-frame Inter-chr p11.23 q14.1 118707 ChimerSeq ChiTaRs ChiTaRs C17orf76-AS1-ITGB2 C17orf76-AS1 chr17 16344613 ITGB2 chr21 46323370 Exonic hg19 NA DA673288 Out-of-frame Inter-chr q22.3 Tumor suppressor gene 118708 ChimerSeq ChiTaRs ChiTaRs SRCAP-YWHAZ SRCAP chr16 30748642 YWHAZ chr8 101960844 Exonic hg19 NA AA307240 Out-of-frame Inter-chr p11.2 Transcription factor q22.3 118709 ChimerSeq ChiTaRs ChiTaRs SNTB2-CTDSP1 SNTB2 chr16 69221643 CTDSP1 chr2 219268023 Exonic hg19 NA DA927367 Out-of-frame Inter-chr q35 118710 ChimerSeq ChiTaRs ChiTaRs ATF7IP-ZIM2 ATF7IP chr12 14577137 ZIM2 chr19 57324650 Exonic hg19 NA CN431174 Out-of-frame Inter-chr p13.1 q13.43 Transcription factor 118711 ChimerSeq ChiTaRs ChiTaRs UBB-HERC1 UBB chr17 16285523 HERC1 chr15 64052625 Exonic hg19 NA AV743942 Out-of-frame Inter-chr p11.2 q22.31 118712 ChimerSeq ChiTaRs ChiTaRs PIP4K2C-MIEN1 PIP4K2C chr12 57994730 MIEN1 chr17 37885508 Exonic hg19 NA AW606546 Out-of-frame Inter-chr q13.3 q12 118713 ChimerSeq ChiTaRs ChiTaRs MTMR3-APOH MTMR3 chr22 30279348 APOH chr17 64212981 Exonic hg19 NA BG469920 5'UTR-CDS Inter-chr q12.2 q24.2 118714 ChimerSeq ChiTaRs ChiTaRs BTBD3-SASH1 BTBD3 chr20 11871602 SASH1 chr6 148846426 Exonic hg19 NA CN387929 5'UTR-CDS Inter-chr p12.2 q24.3 Tumor suppressor gene 118715 ChimerSeq ChiTaRs ChiTaRs FLI1-EWSR1 FLI1 chr11 128660607 EWSR1 chr22 29684449 Exonic hg19 NA JX266523 Out-of-frame Inter-chr q24.3 Oncogene Transcription factor q12.2 KB Pub 118716 ChimerSeq ChiTaRs ChiTaRs CD63-LOC339166 CD63 chr12 56120976 LOC339166 chr17 5718657 Exonic hg19 NA BQ230847 Out-of-frame Inter-chr q13.2 118717 ChimerSeq ChiTaRs ChiTaRs PRNP-SLC20A1 PRNP chr20 4679909 SLC20A1 chr2 113404639 Exonic hg19 NA DA226673 Out-of-frame Inter-chr p13 q14.1 118718 ChimerSeq ChiTaRs ChiTaRs SCN4A-SCN4A SCN4A chr17 62043501 SCN4A chr17 62049581 Exonic hg19 NA CD608175 Out-of-frame Intra-chr q23.3 q23.3 118719 ChimerSeq ChiTaRs ChiTaRs DDX5-PIK3CA DDX5 chr17 62499340 PIK3CA chr3 178947888 Exonic hg19 NA CV347577 Out-of-frame Inter-chr q23.3 q26.32 Oncogene 118720 ChimerSeq ChiTaRs ChiTaRs RPSAP52-ELAC2 RPSAP52 chr12 66221868 ELAC2 chr17 12897748 Exonic hg19 NA BQ948076 Out-of-frame Inter-chr q14.3 p12 118721 ChimerSeq ChiTaRs ChiTaRs MTMR10-TSPAN14 MTMR10 chr15 31267193 TSPAN14 chr10 82264482 Exonic hg19 NA BG389369 Out-of-frame Inter-chr q13.3 q23.1 118722 ChimerSeq ChiTaRs ChiTaRs GRM5-SF3A3 GRM5 chr11 88766533 SF3A3 chr1 38449859 Exonic hg19 NA DB175186 Out-of-frame Inter-chr q14.3 p34.3 118723 ChimerSeq ChiTaRs ChiTaRs FNDC3A-ESD FNDC3A chr13 49580425 ESD chr13 47354073 Exonic hg19 NA BI335248 In-Frame Intra-chr q14.2 q14.2 118724 ChimerSeq ChiTaRs ChiTaRs NID2-RAB7A NID2 chr14 52505643 RAB7A chr3 128532209 Exonic hg19 NA BE764233 Out-of-frame Inter-chr q22.1 q21.3 Tumor suppressor gene 118725 ChimerSeq ChiTaRs ChiTaRs FBLN1-PTPN12 FBLN1 chr22 45959235 PTPN12 chr7 77247796 Exonic hg19 NA BU753777 3'UTR-CDS Inter-chr q13.31 Tumor suppressor gene q11.23 Tumor suppressor gene 118726 ChimerSeq ChiTaRs ChiTaRs B4GALT5-PTK7 B4GALT5 chr20 48252821 PTK7 chr6 43113045 Exonic hg19 NA BF812681 Out-of-frame Inter-chr q13.13 p21.1 118727 ChimerSeq ChiTaRs ChiTaRs ERBB3-RREB1 ERBB3 chr12 56492330 RREB1 chr6 7250051 Exonic hg19 NA BP237824 Out-of-frame Inter-chr q13.2 Oncogene p24.3 Transcription factor 118728 ChimerSeq ChiTaRs ChiTaRs MALAT1-GAPDH MALAT1 chr11 65268332 GAPDH chr12 6646152 Exonic hg19 NA BF815183 Out-of-frame Inter-chr q13.1 p13.31 118729 ChimerSeq ChiTaRs ChiTaRs CORO7-PAM16-MLLT4-AS1 CORO7-PAM16 chr16 4421994 MLLT4-AS1 chr6 168225015 Exonic hg19 NA CB265750 Out-of-frame Inter-chr p13.3 118730 ChimerSeq ChiTaRs ChiTaRs SMARCC2-BCYRN1 SMARCC2 chr12 56565620 BCYRN1 chrX 70460290 Exonic hg19 NA BF376627 Out-of-frame Inter-chr q13.2 p21 118731 ChimerSeq ChiTaRs ChiTaRs DNAJC15-DDX39A DNAJC15 chr13 43597870 DDX39A chr19 14521028 Exonic hg19 NA BI827521 Out-of-frame Inter-chr q14.11 p13.12 118732 ChimerSeq ChiTaRs ChiTaRs CYP1A1-FTSJ3 CYP1A1 chr15 75017871 FTSJ3 chr17 61897101 Exonic hg19 NA DB145273 Out-of-frame Inter-chr q24.1 q23.3 118733 ChimerSeq ChiTaRs ChiTaRs NPTXR-TUBA1B NPTXR chr22 39215353 TUBA1B chr12 49523142 Exonic hg19 NA CD621808 Out-of-frame Inter-chr q13.1 q13.12 118734 ChimerSeq ChiTaRs ChiTaRs VPREB3-CSF1R VPREB3 chr22 24096597 CSF1R chr5 149456347 Exonic hg19 NA DA932555 Out-of-frame Inter-chr q11.23 q32 Oncogene 118735 ChimerSeq ChiTaRs ChiTaRs MON2-CHGB MON2 chr12 62926331 CHGB chr20 5904344 Exonic hg19 NA BC042679 Out-of-frame Inter-chr q14.1 p12.3 118736 ChimerSeq ChiTaRs ChiTaRs NDUFA7-PRKCSH NDUFA7 chr19 8386227 PRKCSH chr19 11556248 Exonic hg19 NA CN412416 Out-of-frame Intra-chr p13.2 p13.2 118737 ChimerSeq ChiTaRs ChiTaRs FKBP2-PLEC FKBP2 chr11 64011604 PLEC chr8 144990215 Exonic hg19 NA CA306251 Out-of-frame Inter-chr q13.1 q24.3 118738 ChimerSeq ChiTaRs ChiTaRs RPL13-MALAT1 RPL13 chr16 89629485 MALAT1 chr11 65267662 Exonic hg19 NA AA063629 Out-of-frame Inter-chr q24.3 q13.1 118739 ChimerSeq ChiTaRs ChiTaRs ZMYND8-CEP250 ZMYND8 chr20 45853063 CEP250 chr20 34078460 Exonic hg19 NA XX000006 Out-of-frame Intra-chr q13.12 q11.22 118740 ChimerSeq ChiTaRs ChiTaRs LOC100507373-PEX5 LOC100507373 chr19 14266291 PEX5 chr12 7342955 Exonic hg19 NA DB158055 5'UTR-5'UTR Inter-chr p13.31 118741 ChimerSeq ChiTaRs ChiTaRs SRC-PSMB2 SRC chr20 36031973 PSMB2 chr1 36068745 Exonic hg19 NA BE908471 Out-of-frame Inter-chr q11.23 TK:Src Oncogene p34.3 118742 ChimerSeq ChiTaRs ChiTaRs CALM1-MGP CALM1 chr14 90874245 MGP chr12 15034952 Exonic hg19 NA BE813514 Out-of-frame Inter-chr q32.11 p12.3 118743 ChimerSeq ChiTaRs ChiTaRs TAGLN-F8A3 TAGLN chr11 117073899 F8A3 chrX 154686900 Exonic hg19 NA AW800830 Out-of-frame Inter-chr q23.3 Tumor suppressor gene q28 118744 ChimerSeq ChiTaRs ChiTaRs BANP-NID2 BANP chr16 88105027 NID2 chr14 52481006 Exonic hg19 NA DB118469 Out-of-frame Inter-chr q24.2 Tumor suppressor gene q22.1 118745 ChimerSeq ChiTaRs ChiTaRs GLYR1-DCTN5 GLYR1 chr16 4897274 DCTN5 chr16 23654274 Exonic hg19 NA BI832490 Out-of-frame Intra-chr p13.3 Transcription factor p12.2 118746 ChimerSeq ChiTaRs ChiTaRs MYL12A-PRMT5 MYL12A chr18 3253269 PRMT5 chr14 23393859 Exonic hg19 NA CD696469 Out-of-frame Inter-chr p11.31 q11.2 118747 ChimerSeq ChiTaRs ChiTaRs TSPAN31-C11orf63 TSPAN31 chr12 58142018 C11orf63 chr11 122775895 Exonic hg19 NA BU634124 Out-of-frame Inter-chr q14.1 q24.1 118748 ChimerSeq ChiTaRs ChiTaRs BOLA2-PDHA1 BOLA2 chr16 30078604 PDHA1 chrX 19372612 Exonic hg19 NA BF694498 Out-of-frame Inter-chr p11.2 p22.12 118749 ChimerSeq ChiTaRs ChiTaRs LILRB1-LYZ LILRB1 chr19 55148628 LYZ chr12 69747550 Exonic hg19 NA AF004230 Out-of-frame Inter-chr q15 118750 ChimerSeq ChiTaRs ChiTaRs PRR4-GIGYF2 PRR4 chr12 11002074 GIGYF2 chr2 233659590 Exonic hg19 NA DB219937 Out-of-frame Inter-chr q37.1 118751 ChimerSeq ChiTaRs ChiTaRs TXNL4B-ALDOB TXNL4B chr16 72090495 ALDOB chr9 104183658 Exonic hg19 NA BC005314 Out-of-frame Inter-chr q22.2 q31.1 118752 ChimerSeq ChiTaRs ChiTaRs PLA2G15-APBB2 PLA2G15 chr16 68294965 APBB2 chr4 41015813 Exonic hg19 NA BQ000365 Out-of-frame Inter-chr q22.1 p13 118753 ChimerSeq ChiTaRs ChiTaRs PPP6R1-ZGLP1 PPP6R1 chr19 55769840 ZGLP1 chr19 10415838 Exonic hg19 NA BM770178 Out-of-frame Intra-chr q13.42 p13.2 Transcription factor 118754 ChimerSeq ChiTaRs ChiTaRs DYNC1LI2-SYCP1 DYNC1LI2 chr16 66756246 SYCP1 chr1 115520197 Exonic hg19 NA AW393520 Out-of-frame Inter-chr q22.1 p13.2 118755 ChimerSeq ChiTaRs ChiTaRs ATP6V0A1-IER3 ATP6V0A1 chr17 40673667 IER3 chr6 2043844 Exonic hg19 NA CB148173 Out-of-frame Inter-chr q21.2 Tumor suppressor gene 118756 ChimerSeq ChiTaRs ChiTaRs CNOT1-ELF3 CNOT1 chr16 58593773 ELF3 chr1 201979752 Exonic hg19 NA DA433989 Out-of-frame Inter-chr q21 q32.1 Transcription factor 118757 ChimerSeq ChiTaRs ChiTaRs RAB5B-SRRM2 RAB5B chr12 56387915 SRRM2 chr16 2819192 Exonic hg19 NA BQ331944 Out-of-frame Inter-chr q13.2 p13.3 118758 ChimerSeq ChiTaRs ChiTaRs MALAT1-C2orf43 MALAT1 chr11 65270412 C2orf43 chr2 20886063 Exonic hg19 NA CD691521 Out-of-frame Inter-chr q13.1 118759 ChimerSeq ChiTaRs ChiTaRs CNOT1-SMARCAD1 CNOT1 chr16 58590886 SMARCAD1 chr4 95212037 Exonic hg19 NA CN352236 Out-of-frame Inter-chr q21 q22.3 118760 ChimerSeq ChiTaRs ChiTaRs CCNK-MICB CCNK chr14 99959934 MICB chr6 2583686 Exonic hg19 NA BF818740 Out-of-frame Inter-chr q32.2 118761 ChimerSeq ChiTaRs ChiTaRs CAPNS1-TPI1 CAPNS1 chr19 36641020 TPI1 chr12 6979864 Exonic hg19 NA BG751641 Out-of-frame Inter-chr q13.12 p13.31 118762 ChimerSeq ChiTaRs ChiTaRs SSH2-ALG11 SSH2 chr17 28003555 ALG11 chr13 52606324 Exonic hg19 NA DB107033 Out-of-frame Inter-chr q11.2 q14.3 118763 ChimerSeq ChiTaRs ChiTaRs CYB5A-RPL10 CYB5A chr18 71928412 RPL10 chrX 153630508 Exonic hg19 NA CB162793 Out-of-frame Inter-chr q22.3 Tumor suppressor gene q28 Tumor suppressor gene 118764 ChimerSeq ChiTaRs ChiTaRs GABARAPL2-TP63 GABARAPL2 chr16 75611449 TP63 chr3 189614740 Exonic hg19 NA BE843564 Out-of-frame Inter-chr q23.1 q28 Tumor suppressor gene Transcription factor 118765 ChimerSeq ChiTaRs ChiTaRs GRN-DEK GRN chr17 42430474 DEK chr6 18225095 Exonic hg19 NA BU616891 Out-of-frame Inter-chr q21.31 p22.3 Oncogene 118766 ChimerSeq ChiTaRs ChiTaRs DNAJA2-ARID1A DNAJA2 chr16 47005438 ARID1A chr1 27106115 Exonic hg19 NA BP213958 Out-of-frame Inter-chr q11.2 p36.11 Oncogene Tumor suppressor gene 118767 ChimerSeq ChiTaRs ChiTaRs CPD-GSTO1 CPD chr17 28766081 GSTO1 chr10 106019490 Exonic hg19 NA AA234313 Out-of-frame Inter-chr q11.2 Tumor suppressor gene q25.1 118768 ChimerSeq ChiTaRs ChiTaRs MIAT-FEM1A MIAT chr22 27071142 FEM1A chr19 4793104 Exonic hg19 NA DA529073 Out-of-frame Inter-chr q12.1 p13.3 118769 ChimerSeq ChiTaRs ChiTaRs MCRS1-CFL1 MCRS1 chr12 49961904 CFL1 chr11 65622394 Exonic hg19 NA AK123187 Out-of-frame Inter-chr q13.12 q13.1 118770 ChimerSeq ChiTaRs ChiTaRs BACE2-LASP1 BACE2 chr21 42556674 LASP1 chr17 37076846 Exonic hg19 NA BF822252 Out-of-frame Inter-chr q22.2 q12 118771 ChimerSeq ChiTaRs ChiTaRs ITPK1-ADH5 ITPK1 chr14 93549521 ADH5 chr4 99997531 Exonic hg19 NA BQ338215 Out-of-frame Inter-chr q23 118772 ChimerSeq ChiTaRs ChiTaRs CTSZ-ISCU CTSZ chr20 57582160 ISCU chr12 108962607 Exonic hg19 NA BE677849 Out-of-frame Inter-chr q13.32 q23.3 118773 ChimerSeq ChiTaRs ChiTaRs CDYL2-PSMB1 CDYL2 chr16 80837812 PSMB1 chr6 170846322 Exonic hg19 NA DA076564 Out-of-frame Inter-chr q23.2 118774 ChimerSeq ChiTaRs ChiTaRs CFL1-MTPN CFL1 chr11 65625651 MTPN chr7 135612328 Exonic hg19 NA CB149514 Out-of-frame Inter-chr q13.1 q33 118775 ChimerSeq ChiTaRs ChiTaRs CD63-RPS5 CD63 chr12 56122766 RPS5 chr19 58904396 Exonic hg19 NA CF128579 Out-of-frame Inter-chr q13.2 q13.43 118776 ChimerSeq ChiTaRs ChiTaRs CCBE1-HIVEP3 CCBE1 chr18 57103029 HIVEP3 chr1 42047670 Exonic hg19 NA BF812042 Out-of-frame Inter-chr q21.32 p34.2 Tumor suppressor gene Transcription factor 118777 ChimerSeq ChiTaRs ChiTaRs PCK1-AMY2B PCK1 chr20 56136259 AMY2B chr1 104108055 Exonic hg19 NA BJ994441 5'UTR-5'UTR Inter-chr q13.31 p21.1 118778 ChimerSeq ChiTaRs ChiTaRs RABEP1-EIF4G1 RABEP1 chr17 5281981 EIF4G1 chr3 184039745 Exonic hg19 NA AI700104 Out-of-frame Inter-chr p13.2 q27.1 118779 ChimerSeq ChiTaRs ChiTaRs BHLHE41-NOMO2 BHLHE41 chr12 26277115 NOMO2 chr16 18566155 Exonic hg19 NA BQ326474 Out-of-frame Inter-chr p12.1 Tumor suppressor gene Transcription factor p12.3 118780 ChimerSeq ChiTaRs ChiTaRs MBD6-SCARA3 MBD6 chr12 57923023 SCARA3 chr8 27530116 Exonic hg19 NA BF829820 Out-of-frame Inter-chr q13.3 Transcription factor p21.1 118781 ChimerSeq ChiTaRs ChiTaRs MALAT1-TMBIM6 MALAT1 chr11 65269352 TMBIM6 chr12 50152468 Exonic hg19 NA BE694076 Out-of-frame Inter-chr q13.1 q13.12 118782 ChimerSeq ChiTaRs ChiTaRs IFNAR1-SF3A3 IFNAR1 chr21 34728866 SF3A3 chr1 38423337 Exonic hg19 NA BG122959 Out-of-frame Inter-chr q22.11 p34.3 118783 ChimerSeq ChiTaRs ChiTaRs LUC7L-HOOK2 LUC7L chr16 259811 HOOK2 chr19 12884764 Exonic hg19 NA CV318627 Out-of-frame Inter-chr p13.3 p13.13 118784 ChimerSeq ChiTaRs ChiTaRs C11orf82-KIFAP3 C11orf82 chr11 82625893 KIFAP3 chr1 169961300 Exonic hg19 NA AU126270 Out-of-frame Inter-chr q24.2 118785 ChimerSeq ChiTaRs ChiTaRs DVL2-BTBD2 DVL2 chr17 7137599 BTBD2 chr19 1990764 Exonic hg19 NA DA514644 Out-of-frame Inter-chr p13.1 p13.3 118786 ChimerSeq ChiTaRs ChiTaRs ZFYVE21-BIN1 ZFYVE21 chr14 104182318 BIN1 chr2 127825738 Exonic hg19 NA BQ068183 Out-of-frame Inter-chr q32.33 q14.3 Tumor suppressor gene 118787 ChimerSeq ChiTaRs ChiTaRs SHC4-B3GAT3 SHC4 chr15 49170723 B3GAT3 chr11 62387968 Exonic hg19 NA BP227858 Out-of-frame Inter-chr q21.1 q12.3 118788 ChimerSeq ChiTaRs ChiTaRs EXOC7-NAP1L1 EXOC7 chr17 74079110 NAP1L1 chr12 76447553 Exonic hg19 NA BF804799 Out-of-frame Inter-chr q25.1 q21.2 118789 ChimerSeq ChiTaRs ChiTaRs PIAS4-NID2 PIAS4 chr19 4013023 NID2 chr14 52485779 Exonic hg19 NA N32450 Out-of-frame Inter-chr p13.3 q22.1 118790 ChimerSeq ChiTaRs ChiTaRs NXN-ID3 NXN chr17 819567 ID3 chr1 23884432 Exonic hg19 NA X66924 Out-of-frame Inter-chr p13.3 118791 ChimerSeq ChiTaRs ChiTaRs SOD1-TAGLN2 SOD1 chr21 33039617 TAGLN2 chr1 159887901 Exonic hg19 NA BU601876 Out-of-frame Inter-chr q22.11 q23.2 118792 ChimerSeq ChiTaRs ChiTaRs PROSAPIP1-MEF2D PROSAPIP1 chr20 3152212 MEF2D chr1 156449541 Exonic hg19 NA AV707545 Out-of-frame Inter-chr q22 Transcription factor 118793 ChimerSeq ChiTaRs ChiTaRs MLLT6-PLEKHH1 MLLT6 chr17 36883807 PLEKHH1 chr14 68054521 Exonic hg19 NA BE891461 Out-of-frame Inter-chr q12 q24.1 118794 ChimerSeq ChiTaRs ChiTaRs DAPK2-RPL8 DAPK2 chr15 64241410 RPL8 chr8 146015269 Exonic hg19 NA BQ330581 Out-of-frame Inter-chr q22.31 CAMK:DAPK Tumor suppressor gene q24.3 118795 ChimerSeq ChiTaRs ChiTaRs EIF2S2-TP53I11 EIF2S2 chr20 32700033 TP53I11 chr11 44955863 Exonic hg19 NA BM837359 Out-of-frame Inter-chr q11.22 p11.2 118796 ChimerSeq ChiTaRs ChiTaRs MALAT1-MUC7 MALAT1 chr11 65266834 MUC7 chr4 71346885 Exonic hg19 NA BX487918 Out-of-frame Inter-chr q13.1 q13.3 118797 ChimerSeq ChiTaRs ChiTaRs RASSF3-SOS2 RASSF3 chr12 65089109 SOS2 chr14 50583853 Exonic hg19 NA AK129920 Out-of-frame Inter-chr q14.2 Tumor suppressor gene q21.3 118798 ChimerSeq ChiTaRs ChiTaRs NDRG3-WBSCR22 NDRG3 chr20 35374481 WBSCR22 chr7 73112373 Exonic hg19 NA AF251054 Out-of-frame Inter-chr q11.23 118799 ChimerSeq ChiTaRs ChiTaRs LOC100507373-MCM3AP LOC100507373 chr19 14266294 MCM3AP chr21 47676713 Exonic hg19 NA DB155514 Out-of-frame Inter-chr q22.3 118800 ChimerSeq ChiTaRs ChiTaRs PRKAR1A-RPS17L PRKAR1A chr17 66521095 RPS17L chr15 83207056 Exonic hg19 NA BF965634 In-Frame Inter-chr q24.2 Oncogene Tumor suppressor gene 118801 ChimerSeq ChiTaRs ChiTaRs DVL2-RNMTL1 DVL2 chr17 7137490 RNMTL1 chr17 695638 Exonic hg19 NA BX103411 Out-of-frame Intra-chr p13.1 118802 ChimerSeq ChiTaRs ChiTaRs IDH2-KIF1C IDH2 chr15 90627487 KIF1C chr17 4927083 Exonic hg19 NA Z28531 Out-of-frame Inter-chr q26.1 Oncogene p13.2 118803 ChimerSeq ChiTaRs ChiTaRs JUP-TAOK3 JUP chr17 39775810 TAOK3 chr12 118684142 Exonic hg19 NA BI259138 Out-of-frame Inter-chr q21.2 Tumor suppressor gene q24.23 118804 ChimerSeq ChiTaRs ChiTaRs LOXHD1-S100A6 LOXHD1 chr18 44201991 S100A6 chr1 153507129 Exonic hg19 NA BI008366 Out-of-frame Inter-chr q21.1 q21.3 118805 ChimerSeq ChiTaRs ChiTaRs GNAS-CHMP2A GNAS chr20 57486236 CHMP2A chr19 59066354 Exonic hg19 NA BU789739 5'UTR-5'UTR Inter-chr q13.32 Oncogene q13.43 118806 ChimerSeq ChiTaRs ChiTaRs RPS11-IDH2 RPS11 chr19 50002945 IDH2 chr15 90627210 Exonic hg19 NA U52144 Out-of-frame Inter-chr q13.33 q26.1 Oncogene 118807 ChimerSeq ChiTaRs ChiTaRs ACIN1-RIN3 ACIN1 chr14 23564333 RIN3 chr14 93081747 Exonic hg19 NA DA335910 Out-of-frame Intra-chr q11.2 q32.12 118808 ChimerSeq ChiTaRs ChiTaRs ZC3H4-PRL ZC3H4 chr19 47588395 PRL chr6 22287579 Exonic hg19 NA AV752015 Out-of-frame Inter-chr q13.32 p22.3 118809 ChimerSeq ChiTaRs ChiTaRs ZNF573-ZNF544 ZNF573 chr19 38264392 ZNF544 chr19 58770822 Exonic hg19 NA BC029468 Out-of-frame Intra-chr q13.13 Transcription factor q13.43 Transcription factor 118810 ChimerSeq ChiTaRs ChiTaRs APLP2-ARHGAP21 APLP2 chr11 130014471 ARHGAP21 chr10 24874857 Exonic hg19 NA BQ309101 Out-of-frame Inter-chr q24.3 p12.1 118811 ChimerSeq ChiTaRs ChiTaRs FBXL3-IER3IP1 FBXL3 chr13 77580911 IER3IP1 chr18 44682458 Exonic hg19 NA BG291321 Out-of-frame Inter-chr q22.3 q21.1 118812 ChimerSeq ChiTaRs ChiTaRs ABCC6-SEMA4G ABCC6 chr16 16249736 SEMA4G chr10 102743741 Exonic hg19 NA W79014 Out-of-frame Inter-chr q24.31 118813 ChimerSeq ChiTaRs ChiTaRs COMT-NICN1 COMT chr22 19956539 NICN1 chr3 49461613 Exonic hg19 NA CB529248 Out-of-frame Inter-chr q11.21 p21.31 118814 ChimerSeq ChiTaRs ChiTaRs FTL-TUBA1B FTL chr19 49468779 TUBA1B chr12 49522392 Exonic hg19 NA H93515 Out-of-frame Inter-chr q13.33 q13.12 118815 ChimerSeq ChiTaRs ChiTaRs GYS1-HSPA14 GYS1 chr19 49471592 HSPA14 chr10 14884639 Exonic hg19 NA AI091299 Out-of-frame Inter-chr q13.33 p13 118816 ChimerSeq ChiTaRs ChiTaRs ZSWIM1-DGAT1 ZSWIM1 chr20 44512944 DGAT1 chr8 145539954 Exonic hg19 NA AK026450 Out-of-frame Inter-chr q13.12 q24.3 118817 ChimerSeq ChiTaRs ChiTaRs HSPB8-TAGLN HSPB8 chr12 119616904 TAGLN chr11 117075355 Exonic hg19 NA CB962711 Out-of-frame Inter-chr q24.23 q23.3 Tumor suppressor gene 118818 ChimerSeq ChiTaRs ChiTaRs CHURC1-FNTB-CAMSAP2 CHURC1-FNTB chr14 65453815 CAMSAP2 chr1 200729965 Exonic hg19 NA T28049 Out-of-frame Inter-chr q23.3 q32.1 118819 ChimerSeq ChiTaRs ChiTaRs CEP128-SLIRP CEP128 chr14 81227958 SLIRP chr14 78177179 Exonic hg19 NA BG209671 Out-of-frame Intra-chr q31.1 q24.3 118820 ChimerSeq ChiTaRs ChiTaRs FTL-GBP4 FTL chr19 49468813 GBP4 chr1 89657076 Exonic hg19 NA BU166365 Out-of-frame Inter-chr q13.33 p22.2 118821 ChimerSeq ChiTaRs ChiTaRs MORC3-PPP3R1 MORC3 chr21 37713757 PPP3R1 chr2 68451644 Exonic hg19 NA BM549676 Out-of-frame Inter-chr q22.12 p14 118822 ChimerSeq ChiTaRs ChiTaRs COCH-GOLGA3 COCH chr14 31359292 GOLGA3 chr12 133402654 Exonic hg19 NA DV459462 Out-of-frame Inter-chr q12 q24.33 118823 ChimerSeq ChiTaRs ChiTaRs C14orf37-PSD3 C14orf37 chr14 58733675 PSD3 chr8 18388197 Exonic hg19 NA BM719820 Out-of-frame Inter-chr q23.1 p22 118824 ChimerSeq ChiTaRs ChiTaRs DHRS2-PDPK1 DHRS2 chr14 24105981 PDPK1 chr16 2692278 Exonic hg19 NA BP238076 5'UTR-3'UTR Inter-chr q11.2 p13.3 118825 ChimerSeq ChiTaRs ChiTaRs RPL13-MASP1 RPL13 chr16 89628148 MASP1 chr3 186994622 Exonic hg19 NA BG331404 Out-of-frame Inter-chr q24.3 q27.3 118826 ChimerSeq ChiTaRs ChiTaRs L2HGDH-KRT19 L2HGDH chr14 50712835 KRT19 chr17 39679869 Exonic hg19 NA BE908214 Out-of-frame Inter-chr q21.3 q21.2 Tumor suppressor gene 118827 ChimerSeq ChiTaRs ChiTaRs AXL-INS-IGF2 AXL chr19 41744458 INS-IGF2 chr11 2153889 Exonic hg19 NA CN404744 Out-of-frame Inter-chr q13.2 TK:Axl Oncogene p15.5 118828 ChimerSeq ChiTaRs ChiTaRs TXNL4B-CFB TXNL4B chr16 72093066 CFB chr6 3251654 Exonic hg19 NA BC007464 Out-of-frame Inter-chr q22.2 118829 ChimerSeq ChiTaRs ChiTaRs SHANK2-U2SURP SHANK2 chr11 70530762 U2SURP chr3 142757735 Exonic hg19 NA BE182878 5'UTR-CDS Inter-chr q13.4 q23 118830 ChimerSeq ChiTaRs ChiTaRs UBE2N-UBE2N UBE2N chr12 93803197 UBE2N chr12 93802268 Exonic hg19 NA AI031822 Out-of-frame Intra-chr q22 q22 118831 ChimerSeq ChiTaRs ChiTaRs RPS16-UBD RPS16 chr19 39924349 UBD chr6 827387 Exonic hg19 NA BE843019 Out-of-frame Inter-chr q13.2 118832 ChimerSeq ChiTaRs ChiTaRs APOL2-SNCA APOL2 chr22 36635565 SNCA chr4 90647368 Exonic hg19 NA DA153823 Out-of-frame Inter-chr q12.3 q22.1 118833 ChimerSeq ChiTaRs ChiTaRs CAPN1-CS CAPN1 chr11 64949381 CS chr12 56677599 Exonic hg19 NA DB135857 Out-of-frame Inter-chr q13.1 q13.3 118834 ChimerSeq ChiTaRs ChiTaRs NPTN-LOC643387 NPTN chr15 73852845 LOC643387 chr2 239142689 Exonic hg19 NA AW868967 Out-of-frame Inter-chr q24.1 118835 ChimerSeq ChiTaRs ChiTaRs FKBP8-C17orf103 FKBP8 chr19 18652807 C17orf103 chr17 21144788 Exonic hg19 NA BM807762 Out-of-frame Inter-chr p13.11 118836 ChimerSeq ChiTaRs ChiTaRs CCDC47-HSPA8 CCDC47 chr17 61850869 HSPA8 chr11 122928549 Exonic hg19 NA CN338266 Out-of-frame Inter-chr q23.3 q24.1 118837 ChimerSeq ChiTaRs ChiTaRs PITPNM2-MRPS5 PITPNM2 chr12 123626309 MRPS5 chr2 95752952 Exonic hg19 NA BM805336 Out-of-frame Inter-chr q24.31 q11.1 118838 ChimerSeq ChiTaRs ChiTaRs LGALS4-MUC1 LGALS4 chr19 39293186 MUC1 chr1 155161943 Exonic hg19 NA AW391718 Out-of-frame Inter-chr q22 Oncogene 118839 ChimerSeq ChiTaRs ChiTaRs PPDPF-SARS PPDPF chr20 62153293 SARS chr1 109777984 Exonic hg19 NA BQ923288 Out-of-frame Inter-chr q13.33 p13.3 118840 ChimerSeq ChiTaRs ChiTaRs PIK3R2-SETX PIK3R2 chr19 18288925 SETX chr9 135150689 Exonic hg19 NA AA496625 Out-of-frame Inter-chr p13.11 Oncogene q34.13 118841 ChimerSeq ChiTaRs ChiTaRs PEBP1-AMIGO1 PEBP1 chr12 118583389 AMIGO1 chr1 110049449 Exonic hg19 NA CK024098 Out-of-frame Inter-chr q24.23 Tumor suppressor gene p13.3 118842 ChimerSeq ChiTaRs ChiTaRs PDIA3-ARF1 PDIA3 chr15 44062741 ARF1 chr1 228286648 Exonic hg19 NA AV749342 Out-of-frame Inter-chr q15.3 q42.13 Tumor suppressor gene 118843 ChimerSeq ChiTaRs ChiTaRs PRR4-LTF PRR4 chr12 11002071 LTF chr3 46495795 Exonic hg19 NA DB205527 Out-of-frame Inter-chr p21.31 Oncogene Tumor suppressor gene Transcription factor 118844 ChimerSeq ChiTaRs ChiTaRs GALNT8-CHD4 GALNT8 chr12 4874593 CHD4 chr12 6682376 Exonic hg19 NA BM797239 Out-of-frame Intra-chr p13.32 p13.31 118845 ChimerSeq ChiTaRs ChiTaRs MRPS34-OTX1 MRPS34 chr16 1822886 OTX1 chr2 63283328 Exonic hg19 NA AW939880 Out-of-frame Inter-chr p13.3 p15 Transcription factor 118846 ChimerSeq ChiTaRs ChiTaRs TMEM107-SLC4A1AP TMEM107 chr17 8076906 SLC4A1AP chr2 27886757 Exonic hg19 NA DA507601 Out-of-frame Inter-chr p13.1 p23.3 118847 ChimerSeq ChiTaRs ChiTaRs PRR4-MYH11 PRR4 chr12 11002074 MYH11 chr16 15832473 Exonic hg19 NA DB216219 Out-of-frame Inter-chr Oncogene 118848 ChimerSeq ChiTaRs ChiTaRs UBE2G2-C1orf61 UBE2G2 chr21 46190114 C1orf61 chr1 156379996 Exonic hg19 NA BE882626 Out-of-frame Inter-chr q22.3 q22 118849 ChimerSeq ChiTaRs ChiTaRs ERBB2-NOMO1 ERBB2 chr17 37884125 NOMO1 chr16 14976494 Exonic hg19 NA CV340327 Out-of-frame Inter-chr q12 Oncogene 118850 ChimerSeq ChiTaRs ChiTaRs ISYNA1-CSH1 ISYNA1 chr19 18547552 CSH1 chr17 61973091 Exonic hg19 NA AW962615 Out-of-frame Inter-chr p13.11 q23.3 118851 ChimerSeq ChiTaRs ChiTaRs TAF1D-SCAF8 TAF1D chr11 93465647 SCAF8 chr6 155153340 Exonic hg19 NA H09708 Out-of-frame Inter-chr q21 q25.2 118852 ChimerSeq ChiTaRs ChiTaRs MSI2-ALDH3A1 MSI2 chr17 55335694 ALDH3A1 chr17 19641303 Exonic hg19 NA CV572132 Out-of-frame Intra-chr q22 p11.2 118853 ChimerSeq ChiTaRs ChiTaRs CCDC88C-MXRA7 CCDC88C chr14 91810003 MXRA7 chr17 74676229 Exonic hg19 NA BG200422 Out-of-frame Inter-chr q32.12 q25.1 118854 ChimerSeq ChiTaRs ChiTaRs TMED3-MCPH1 TMED3 chr15 79614830 MCPH1 chr8 6372197 Exonic hg19 NA DB292767 Out-of-frame Inter-chr q25.1 p23.1 Tumor suppressor gene 118855 ChimerSeq ChiTaRs ChiTaRs FKBP3-COX5A FKBP3 chr14 45587264 COX5A chr15 75212621 Exonic hg19 NA BU955324 Out-of-frame Inter-chr q21.2 q24.2 118856 ChimerSeq ChiTaRs ChiTaRs PRKCSH-PURB PRKCSH chr19 11561783 PURB chr7 44919088 Exonic hg19 NA AA282178 Out-of-frame Inter-chr p13.2 p13 Transcription factor 118857 ChimerSeq ChiTaRs ChiTaRs PIEZO1-UBE4B PIEZO1 chr16 88783668 UBE4B chr1 10155523 Exonic hg19 NA BF889257 Out-of-frame Inter-chr q24.3 p36.22 Tumor suppressor gene 118858 ChimerSeq ChiTaRs ChiTaRs MAPK8IP3-IPO13 MAPK8IP3 chr16 1819723 IPO13 chr1 44433065 Exonic hg19 NA BF948732 Out-of-frame Inter-chr p13.3 p34.1 118859 ChimerSeq ChiTaRs ChiTaRs CHGA-HGSNAT CHGA chr14 93401625 HGSNAT chr8 43056090 Exonic hg19 NA N95072 Out-of-frame Inter-chr q32.12 p11.21 118860 ChimerSeq ChiTaRs ChiTaRs RNASE1-UBL3 RNASE1 chr14 21271006 UBL3 chr13 30351292 Exonic hg19 NA DB063353 Out-of-frame Inter-chr q11.2 q12.3 118861 ChimerSeq ChiTaRs ChiTaRs NEAT1-KCNH2 NEAT1 chr11 65193013 KCNH2 chr7 150647266 Exonic hg19 NA BQ478537 Out-of-frame Inter-chr q13.1 q36.1 118862 ChimerSeq ChiTaRs ChiTaRs PMEL-DPCD PMEL chr12 56359806 DPCD chr10 103339274 Exonic hg19 NA EL948109 Out-of-frame Inter-chr q13.2 q24.32 118863 ChimerSeq ChiTaRs ChiTaRs SF3B3-SSH2 SF3B3 chr16 70605815 SSH2 chr17 28116418 Exonic hg19 NA BG945983 Out-of-frame Inter-chr q22.1 q11.2 118864 ChimerSeq ChiTaRs ChiTaRs VPS36-PAIP2B VPS36 chr13 53005268 PAIP2B chr2 71415438 Exonic hg19 NA AK094335 Out-of-frame Inter-chr q14.3 p13.3 118865 ChimerSeq ChiTaRs ChiTaRs SMARCB1-ORM1 SMARCB1 chr22 24176694 ORM1 chr9 117087108 Exonic hg19 NA BM684983 Out-of-frame Inter-chr q11.23 Oncogene Tumor suppressor gene q32 118866 ChimerSeq ChiTaRs ChiTaRs JUP-CUL3 JUP chr17 39777918 CUL3 chr2 225338955 Exonic hg19 NA BE717377 Out-of-frame Inter-chr q21.2 Tumor suppressor gene q36.2 118867 ChimerSeq ChiTaRs ChiTaRs ZNF573-ZNF544 ZNF573 chr19 38270214 ZNF544 chr19 58771014 Exonic hg19 NA BG572864 Out-of-frame Intra-chr q13.13 Transcription factor q13.43 Transcription factor 118868 ChimerSeq ChiTaRs ChiTaRs FUS-PHLDB2 FUS chr16 31195546 PHLDB2 chr3 111632288 Exonic hg19 NA CN418196 Out-of-frame Inter-chr p11.2 Tumor suppressor gene q13.2 118869 ChimerSeq ChiTaRs ChiTaRs RNASE1-FOXRED1 RNASE1 chr14 21271006 FOXRED1 chr11 126141330 Exonic hg19 NA DA382217 Out-of-frame Inter-chr q11.2 q24.2 118870 ChimerSeq ChiTaRs ChiTaRs PAFAH1B2-FOXR1 PAFAH1B2 chr11 117023244 FOXR1 chr11 118849489 Exonic hg19 NA BC064340 Out-of-frame Intra-chr q23.3 Transcription factor KB 118871 ChimerSeq ChiTaRs ChiTaRs FTL-ADAR FTL chr19 49470136 ADAR chr1 154556097 Exonic hg19 NA CA306727 3'UTR-3'UTR Inter-chr q13.33 q21.3 118872 ChimerSeq ChiTaRs ChiTaRs MAFG-ANXA6 MAFG chr17 79879648 ANXA6 chr5 150507772 Exonic hg19 NA AA193370 Out-of-frame Inter-chr q25.3 Transcription factor q33.1 118873 ChimerSeq ChiTaRs ChiTaRs ITGB4-LOC100507412 ITGB4 chr17 73750736 LOC100507412 chr? 117067 Exonic hg19 NA BF798473 Out-of-frame Inter-chr q25.1 118874 ChimerSeq ChiTaRs ChiTaRs ZNF708-CYP46A1 ZNF708 chr19 21477544 CYP46A1 chr14 100192913 Exonic hg19 NA AK095062 Out-of-frame Inter-chr p12 Transcription factor q32.2 118875 ChimerSeq ChiTaRs ChiTaRs ZNF785-DCX ZNF785 chr16 30590845 DCX chrX 110539882 Exonic hg19 NA BM678941 Out-of-frame Inter-chr p11.2 Transcription factor q23 118876 ChimerSeq ChiTaRs ChiTaRs ALOX15B-CAPNS1 ALOX15B chr17 7952039 CAPNS1 chr19 36640996 Exonic hg19 NA BF737723 Out-of-frame Inter-chr p13.1 Tumor suppressor gene q13.12 118877 ChimerSeq ChiTaRs ChiTaRs NPIPB7-ANKZF1 NPIPB7 chr16 28997058 ANKZF1 chr2 220098890 Exonic hg19 NA DB119802 Out-of-frame Inter-chr p12.1 q35 Transcription factor 118878 ChimerSeq ChiTaRs ChiTaRs TMEM104-PPP2R4 TMEM104 chr17 72833210 PPP2R4 chr9 131911128 Exonic hg19 NA BC037584 Out-of-frame Inter-chr q25.1 Tumor suppressor gene 118879 ChimerSeq ChiTaRs ChiTaRs UBC-LMNA UBC chr12 125399197 LMNA chr1 156104269 Exonic hg19 NA DA586628 Out-of-frame Inter-chr q24.31 q22 118880 ChimerSeq ChiTaRs ChiTaRs PCNXL3-SF3A1 PCNXL3 chr11 65392004 SF3A1 chr22 30730164 Exonic hg19 NA AK026080 Out-of-frame Inter-chr q12.2 118881 ChimerSeq ChiTaRs ChiTaRs EEF2-F10 EEF2 chr19 3976177 F10 chr13 113803335 Exonic hg19 NA N93529 Out-of-frame Inter-chr p13.3 q34 118882 ChimerSeq ChiTaRs ChiTaRs TCF20-TM2D2 TCF20 chr22 42605908 TM2D2 chr8 38848946 Exonic hg19 NA BE714961 Out-of-frame Inter-chr Transcription factor p11.22 118883 ChimerSeq ChiTaRs ChiTaRs IREB2-OXR1 IREB2 chr15 78732223 OXR1 chr8 107718609 Exonic hg19 NA DA444134 Out-of-frame Inter-chr q25.1 q23.1 118884 ChimerSeq ChiTaRs ChiTaRs SERPINF1-YWHAG SERPINF1 chr17 1679893 YWHAG chr7 75956921 Exonic hg19 NA BF701694 Out-of-frame Inter-chr q11.23 118885 ChimerSeq ChiTaRs ChiTaRs TAOK3-TOB1 TAOK3 chr12 118810633 TOB1 chr17 48940296 Exonic hg19 NA AA503079 Out-of-frame Inter-chr q24.23 q21.33 118886 ChimerSeq ChiTaRs ChiTaRs COL1A1-SLC39A7 COL1A1 chr17 48261680 SLC39A7 chr6 4403737 Exonic hg19 NA BQ181268 Out-of-frame Inter-chr q21.33 Oncogene 118887 ChimerSeq ChiTaRs ChiTaRs ZMYM2-RAB1A ZMYM2 chr13 20534166 RAB1A chr2 65316112 Exonic hg19 NA DA134735 5'UTR-CDS Inter-chr q12.11 p14 118888 ChimerSeq ChiTaRs ChiTaRs PRMT2-GAPDH PRMT2 chr21 48081784 GAPDH chr12 6645706 Exonic hg19 NA BE255519 Out-of-frame Inter-chr q22.3 p13.31 118889 ChimerSeq ChiTaRs ChiTaRs TMEM241-TMED4 TMEM241 chr18 20876351 TMED4 chr7 44620519 Exonic hg19 NA CA432178 Out-of-frame Inter-chr q11.2 p13 118890 ChimerSeq ChiTaRs ChiTaRs ZNF207-IL4R ZNF207 chr17 30697083 IL4R chr16 27353445 Exonic hg19 NA CF125176 Out-of-frame Inter-chr q11.2 Transcription factor p12.1 118891 ChimerSeq ChiTaRs ChiTaRs EEF2-CSNK1D EEF2 chr19 3985443 CSNK1D chr17 80202238 Exonic hg19 NA BC068002 Out-of-frame Inter-chr p13.3 q25.3 118892 ChimerSeq ChiTaRs ChiTaRs A2M-AFMID A2M chr12 9247627 AFMID chr17 76203648 Exonic hg19 NA W90454 Out-of-frame Inter-chr p13.31 q25.3 118893 ChimerSeq ChiTaRs ChiTaRs EPOR-RDH11 EPOR chr19 11491888 RDH11 chr14 68156928 Exonic hg19 NA BM552700 3'UTR-CDS Inter-chr p13.2 q24.1 118894 ChimerSeq ChiTaRs ChiTaRs TBCB-SERPINB2 TBCB chr19 36616722 SERPINB2 chr18 61558822 Exonic hg19 NA CD522326 Out-of-frame Inter-chr q13.12 q21.33 118895 ChimerSeq ChiTaRs ChiTaRs YWHAE-LIPF YWHAE chr17 1303511 LIPF chr10 90424200 Exonic hg19 NA BP341542 Out-of-frame Inter-chr p13.3 q23.31 118896 ChimerSeq ChiTaRs ChiTaRs APLP2-PRRC2C APLP2 chr11 130014501 PRRC2C chr1 171501915 Exonic hg19 NA BM752864 Out-of-frame Inter-chr q24.3 q24.3 118897 ChimerSeq ChiTaRs ChiTaRs MIDN-ARL8A MIDN chr19 1259142 ARL8A chr1 202103565 Exonic hg19 NA AI570555 3'UTR-3'UTR Inter-chr p13.3 q32.1 118898 ChimerSeq ChiTaRs ChiTaRs PPFIA2-SON PPFIA2 chr12 82152434 SON chr21 34931534 Exonic hg19 NA DA529554 Out-of-frame Inter-chr q21.31 q22.11 Transcription factor 118899 ChimerSeq ChiTaRs ChiTaRs GTF2F1-S100A16 GTF2F1 chr19 6380694 S100A16 chr1 153579811 Exonic hg19 NA AW370288 Out-of-frame Inter-chr p13.3 q21.3 118900 ChimerSeq ChiTaRs ChiTaRs RBM14-SLC27A2 RBM14 chr11 66394814 SLC27A2 chr15 50518217 Exonic hg19 NA AA888112 Out-of-frame Inter-chr q13.2 Tumor suppressor gene q21.2 118901 ChimerSeq ChiTaRs ChiTaRs CRKL-ARHGEF6 CRKL chr22 21304742 ARHGEF6 chrX 135748285 Exonic hg19 NA AV727141 Out-of-frame Inter-chr q11.21 Oncogene q26.3 118902 ChimerSeq ChiTaRs ChiTaRs ZNF83-EXOC3L2 ZNF83 chr19 53141589 EXOC3L2 chr19 45720803 Exonic hg19 NA BX283946 Out-of-frame Intra-chr q13.41 Transcription factor q13.32 118903 ChimerSeq ChiTaRs ChiTaRs NR1H2-SMARCD1 NR1H2 chr19 50881545 SMARCD1 chr12 50493826 Exonic hg19 NA BM719092 Out-of-frame Inter-chr q13.33 Transcription factor q13.12 118904 ChimerSeq ChiTaRs ChiTaRs ATF5-VPS13D ATF5 chr19 50437188 VPS13D chr1 12569971 Exonic hg19 NA AI857456 Out-of-frame Inter-chr q13.33 Transcription factor p36.22 118905 ChimerSeq ChiTaRs ChiTaRs CACNA2D4-HMGN2 CACNA2D4 chr12 2027712 HMGN2 chr1 26799035 Exonic hg19 NA BC075848 Out-of-frame Inter-chr p13.33 p36.11 118906 ChimerSeq ChiTaRs ChiTaRs NRXN2-GIT1 NRXN2 chr11 64422578 GIT1 chr17 27901297 Exonic hg19 NA BF932395 Out-of-frame Inter-chr q13.1 q11.2 118907 ChimerSeq ChiTaRs ChiTaRs SS18-SSX4B SS18 chr18 23615021 SSX4B chrX 48262021 Exonic hg19 NA AF114234 Out-of-frame Inter-chr q11.2 p11.23 118908 ChimerSeq ChiTaRs ChiTaRs SCNN1A-LOC100507412 SCNN1A chr12 6484565 LOC100507412 chr? 115849 Exonic hg19 NA BF884645 Out-of-frame Inter-chr p13.31 118909 ChimerSeq ChiTaRs ChiTaRs BIVM-ERCC5-RBM26 BIVM-ERCC5 chr13 103518629 RBM26 chr13 79939718 Exonic hg19 NA N86990 Out-of-frame Intra-chr q33.1 q31.1 Oncogene 118910 ChimerSeq ChiTaRs ChiTaRs AQR-FARSB AQR chr15 35261962 FARSB chr2 223499162 Exonic hg19 NA DB256784 Out-of-frame Inter-chr q14 q36.1 118911 ChimerSeq ChiTaRs ChiTaRs RBL2-LCORL RBL2 chr16 53493412 LCORL chr4 17894277 Exonic hg19 NA CB149026 Out-of-frame Inter-chr q12.2 Tumor suppressor gene p15.31 Transcription factor 118912 ChimerSeq ChiTaRs ChiTaRs UBB-SMARCA4 UBB chr17 16285496 SMARCA4 chr19 11095008 Exonic hg19 NA DB041801 Out-of-frame Inter-chr p11.2 p13.2 Oncogene Tumor suppressor gene 118913 ChimerSeq ChiTaRs ChiTaRs LLPH-BTBD10 LLPH chr12 66563798 BTBD10 chr11 13443319 Exonic hg19 NA BP320300 Out-of-frame Inter-chr q14.3 p15.3 118914 ChimerSeq ChiTaRs ChiTaRs HOMEZ-FBXO34 HOMEZ chr14 23770761 FBXO34 chr14 55817097 Exonic hg19 NA DA330803 Out-of-frame Intra-chr q11.2 Transcription factor q22.3 118915 ChimerSeq ChiTaRs ChiTaRs KLHDC4-CTGF KLHDC4 chr16 87782368 CTGF chr6 132271589 Exonic hg19 NA CN482962 Out-of-frame Inter-chr q24.2 q23.2 Tumor suppressor gene 118916 ChimerSeq ChiTaRs ChiTaRs ATP5S-SRP54 ATP5S chr14 50789439 SRP54 chr14 35497293 Exonic hg19 NA BI962829 In-Frame Intra-chr q21.3 q13.2 118917 ChimerSeq ChiTaRs ChiTaRs ZFYVE21-RERE ZFYVE21 chr14 104200342 RERE chr1 8421346 Exonic hg19 NA AI802312 Out-of-frame Inter-chr q32.33 p36.23 118918 ChimerSeq ChiTaRs ChiTaRs AP3D1-LCP1 AP3D1 chr19 2110216 LCP1 chr13 46701090 Exonic hg19 NA BF895962 Out-of-frame Inter-chr p13.3 q14.13 118919 ChimerSeq ChiTaRs ChiTaRs UBE2G1-VAC14 UBE2G1 chr17 4175271 VAC14 chr16 70817345 Exonic hg19 NA BP265165 Out-of-frame Inter-chr p13.2 q22.2 118920 ChimerSeq ChiTaRs ChiTaRs SIRT7-LOC100130950 SIRT7 chr17 79874456 LOC100130950 chr17 5118447 Exonic hg19 NA AW075221 Out-of-frame Intra-chr q25.3 118921 ChimerSeq ChiTaRs ChiTaRs CYP19A1-THRAP3 CYP19A1 chr15 51501771 THRAP3 chr1 36752406 Exonic hg19 NA R27767 Out-of-frame Inter-chr q21.2 p34.3 118922 ChimerSeq ChiTaRs ChiTaRs OGFOD1-PARP14 OGFOD1 chr16 56511407 PARP14 chr3 122447757 Exonic hg19 NA CD368875 3'UTR-3'UTR Inter-chr q13 q21.1 118923 ChimerSeq ChiTaRs ChiTaRs ATP8B3-TFAM ATP8B3 chr19 1783030 TFAM chr10 60145312 Exonic hg19 NA AL048975 Out-of-frame Inter-chr p13.3 q21.1 118924 ChimerSeq ChiTaRs ChiTaRs PPY-LARP6 PPY chr17 42018531 LARP6 chr15 71123889 Exonic hg19 NA BP396278 Out-of-frame Inter-chr q21.31 q23 118925 ChimerSeq ChiTaRs ChiTaRs CTSA-PIGQ CTSA chr20 44521067 PIGQ chr16 633475 Exonic hg19 NA BM842710 Out-of-frame Inter-chr q13.12 p13.3 118926 ChimerSeq ChiTaRs ChiTaRs TBC1D2B-YIPF1 TBC1D2B chr15 78317639 YIPF1 chr1 54325728 Exonic hg19 NA BM047840 CDS-3'UTR Inter-chr q25.1 p32.3 118927 ChimerSeq ChiTaRs ChiTaRs RPL28-LASP1 RPL28 chr19 55897775 LASP1 chr17 37076280 Exonic hg19 NA BE388585 Out-of-frame Inter-chr q13.42 q12 118928 ChimerSeq ChiTaRs ChiTaRs CEACAM6-ZNF37A CEACAM6 chr19 42274774 ZNF37A chr10 38411258 Exonic hg19 NA BF744189 Out-of-frame Inter-chr q13.2 p11.1 Transcription factor 118929 ChimerSeq ChiTaRs ChiTaRs PSMC5-SLC4A5 PSMC5 chr17 61907669 SLC4A5 chr2 74588368 Exonic hg19 NA CN413033 Out-of-frame Inter-chr q23.3 p13.1 118930 ChimerSeq ChiTaRs ChiTaRs ABHD17A-ABHD17A ABHD17A chr19 1881291 ABHD17A chr19 1876975 Exonic hg19 NA BM049662 Out-of-frame Intra-chr p13.3 p13.3 118931 ChimerSeq ChiTaRs ChiTaRs CCDC41-EIF4EBP2 CCDC41 chr12 94818751 EIF4EBP2 chr10 72164149 Exonic hg19 NA BP288018 Out-of-frame Inter-chr q22.1 118932 ChimerSeq ChiTaRs ChiTaRs PRDM10-FABP1 PRDM10 chr11 129812485 FABP1 chr2 88422501 Exonic hg19 NA AK000234 Out-of-frame Inter-chr q24.3 Transcription factor p11.2 118933 ChimerSeq ChiTaRs ChiTaRs PDPK1-SFTPC PDPK1 chr16 2604843 SFTPC chr8 22019315 Exonic hg19 NA BF875520 Out-of-frame Inter-chr p13.3 p21.3 118934 ChimerSeq ChiTaRs ChiTaRs SLC5A10-FGG SLC5A10 chr17 18872216 FGG chr4 155533217 Exonic hg19 NA AV657449 Out-of-frame Inter-chr p11.2 q32.1 118935 ChimerSeq ChiTaRs ChiTaRs TBC1D10B-PPIA TBC1D10B chr16 30381522 PPIA chr7 44836308 Exonic hg19 NA BC015680 5'UTR-5'UTR Inter-chr p11.2 p13 118936 ChimerSeq ChiTaRs ChiTaRs NRSN2-CCDC88C NRSN2 chr20 334388 CCDC88C chr14 91737669 Exonic hg19 NA AB040942 Out-of-frame Inter-chr p13 Tumor suppressor gene q32.12 118937 ChimerSeq ChiTaRs ChiTaRs ABHD2-NFX1 ABHD2 chr15 89631796 NFX1 chr9 33301258 Exonic hg19 NA DB209231 Out-of-frame Inter-chr q26.1 p13.3 Transcription factor 118938 ChimerSeq ChiTaRs ChiTaRs LOH12CR1-ORAOV1 LOH12CR1 chr12 12618726 ORAOV1 chr11 69480358 Exonic hg19 NA CD675729 Out-of-frame Inter-chr q13.3 118939 ChimerSeq ChiTaRs ChiTaRs NPC2-C12orf66 NPC2 chr14 74946962 C12orf66 chr12 64588338 Exonic hg19 NA W44590 Out-of-frame Inter-chr q24.3 q14.2 118940 ChimerSeq ChiTaRs ChiTaRs RBM39-DTNB RBM39 chr20 34312569 DTNB chr2 25744282 Exonic hg19 NA CV351209 Out-of-frame Inter-chr q11.22 p23.3 118941 ChimerSeq ChiTaRs ChiTaRs MCAM-C1D MCAM chr11 119179754 C1D chr2 68269624 Exonic hg19 NA N42327 Out-of-frame Inter-chr q23.3 p14 118942 ChimerSeq ChiTaRs ChiTaRs MIAT-CDH13 MIAT chr22 27070719 CDH13 chr16 82660633 Exonic hg19 NA L34058 Out-of-frame Inter-chr q12.1 q23.3 Tumor suppressor gene 118943 ChimerSeq ChiTaRs ChiTaRs FCAR-CNN2 FCAR chr19 55386822 CNN2 chr19 1036127 Exonic hg19 NA BI909368 Out-of-frame Intra-chr p13.3 118944 ChimerSeq ChiTaRs ChiTaRs LOC338799-IARS LOC338799 chr12 122240851 IARS chr9 95014131 Exonic hg19 NA DA505108 Out-of-frame Inter-chr q22.31 118945 ChimerSeq ChiTaRs ChiTaRs UBTF-TK1 UBTF chr17 42283484 TK1 chr17 76171097 Exonic hg19 NA BE729700 Out-of-frame Intra-chr q21.31 q25.3 118946 ChimerSeq ChiTaRs ChiTaRs DNAJC7-ARID4B DNAJC7 chr17 40142359 ARID4B chr1 235345971 Exonic hg19 NA AW814689 Out-of-frame Inter-chr q21.2 q42.3 118947 ChimerSeq ChiTaRs ChiTaRs LSM14A-DCTN2 LSM14A chr19 34687668 DCTN2 chr12 57925795 Exonic hg19 NA BF686433 Out-of-frame Inter-chr q13.3 118948 ChimerSeq ChiTaRs ChiTaRs CCND1-ATP5J2-PTCD1 CCND1 chr11 69468806 ATP5J2-PTCD1 chr7 99055919 Exonic hg19 NA BE077401 Out-of-frame Inter-chr q13.3 Oncogene q22.1 118949 ChimerSeq ChiTaRs ChiTaRs JUND-PHF5A JUND chr19 18390943 PHF5A chr22 41855756 Exonic hg19 NA AI494246 Out-of-frame Inter-chr p13.11 Transcription factor q13.2 118950 ChimerSeq ChiTaRs ChiTaRs CST3-VPS13D CST3 chr20 23614371 VPS13D chr1 12418539 Exonic hg19 NA AA446900 Out-of-frame Inter-chr p11.21 p36.22 118951 ChimerSeq ChiTaRs ChiTaRs ZNF521-RPL6 ZNF521 chr18 22840471 RPL6 chr12 112842995 Exonic hg19 NA AK126570 Out-of-frame Inter-chr q11.2 Oncogene Transcription factor q24.13 118952 ChimerSeq ChiTaRs ChiTaRs GIPC1-ADAM12 GIPC1 chr19 14591479 ADAM12 chr10 127753396 Exonic hg19 NA BG002551 Out-of-frame Inter-chr p13.12 q26.2 118953 ChimerSeq ChiTaRs ChiTaRs NME4-CALR NME4 chr16 450405 CALR chr19 13050924 Exonic hg19 NA BQ305064 Out-of-frame Inter-chr p13.3 p13.13 118954 ChimerSeq ChiTaRs ChiTaRs OAZ2-LOC100499227 OAZ2 chr15 64982750 LOC100499227 chr11 119288891 Exonic hg19 NA W51772 Out-of-frame Inter-chr q22.31 118955 ChimerSeq ChiTaRs ChiTaRs NEAT1-ERBB3 NEAT1 chr11 65190764 ERBB3 chr12 56495438 Exonic hg19 NA AW389526 Out-of-frame Inter-chr q13.1 q13.2 Oncogene 118956 ChimerSeq ChiTaRs ChiTaRs USP32-UPF2 USP32 chr17 58407912 UPF2 chr10 12071405 Exonic hg19 NA CD639413 Out-of-frame Inter-chr q23.2 p14 118957 ChimerSeq ChiTaRs ChiTaRs MT1X-RNF216 MT1X chr16 56718108 RNF216 chr7 5780618 Exonic hg19 NA CA309051 3'UTR-CDS Inter-chr q13 p22.1 118958 ChimerSeq ChiTaRs ChiTaRs FTL-KPNA4 FTL chr19 49468644 KPNA4 chr3 160253596 Exonic hg19 NA BJ996632 Out-of-frame Inter-chr q13.33 q25.33 118959 ChimerSeq ChiTaRs ChiTaRs CTTN-LASP1 CTTN chr11 70282233 LASP1 chr17 37077084 Exonic hg19 NA CB216704 Out-of-frame Inter-chr q13.3 q12 118960 ChimerSeq ChiTaRs ChiTaRs SLC35E3-ARCN1 SLC35E3 chr12 69159853 ARCN1 chr11 118472112 Exonic hg19 NA BF510780 3'UTR-3'UTR Inter-chr q15 q23.3 118961 ChimerSeq ChiTaRs ChiTaRs GINS1-SERINC1 GINS1 chr20 25388532 SERINC1 chr6 122765038 Exonic hg19 NA N39921 Out-of-frame Inter-chr p11.21 q22.31 118962 ChimerSeq ChiTaRs ChiTaRs RPL4-ACTN1 RPL4 chr15 66795836 ACTN1 chr14 69345177 Exonic hg19 NA DN601711 Out-of-frame Inter-chr q22.31 q24.1 118963 ChimerSeq ChiTaRs ChiTaRs RILPL2-HNRNPD RILPL2 chr12 123921017 HNRNPD chr4 83280731 Exonic hg19 NA DA569517 Out-of-frame Inter-chr q24.31 q21.22 118964 ChimerSeq ChiTaRs ChiTaRs IQCD-CASC3 IQCD chr12 113633420 CASC3 chr17 38327416 Exonic hg19 NA AI206204 Out-of-frame Inter-chr q24.13 q21.1 118965 ChimerSeq ChiTaRs ChiTaRs FUS-MAEA FUS chr16 31196500 MAEA chr4 1326544 Exonic hg19 NA CX872911 In-Frame Inter-chr p11.2 Tumor suppressor gene p16.3 118966 ChimerSeq ChiTaRs ChiTaRs SCAF1-ADAMTSL4 SCAF1 chr19 50161899 ADAMTSL4 chr1 150527972 Exonic hg19 NA BM677150 Out-of-frame Inter-chr q13.33 q21.2 118967 ChimerSeq ChiTaRs ChiTaRs SNRPN-DTNA SNRPN chr15 25486973 DTNA chr18 32468577 Exonic hg19 NA DA248682 Out-of-frame Inter-chr q11.2 q12.1 118968 ChimerSeq ChiTaRs ChiTaRs RPL23A-NAA15 RPL23A chr17 27050502 NAA15 chr4 140278552 Exonic hg19 NA BG623888 Out-of-frame Inter-chr q11.2 q31.1 118969 ChimerSeq ChiTaRs ChiTaRs KDM2A-TMEM71 KDM2A chr11 66975162 TMEM71 chr8 133764128 Exonic hg19 NA DA951606 Out-of-frame Inter-chr q13.2 Transcription factor q24.22 118970 ChimerSeq ChiTaRs ChiTaRs CD68-GM2A CD68 chr17 7483267 GM2A chr5 150648146 Exonic hg19 NA BQ549982 Out-of-frame Inter-chr p13.1 q33.1 118971 ChimerSeq ChiTaRs ChiTaRs CCNK-ATP13A1 CCNK chr14 99969981 ATP13A1 chr19 19756007 Exonic hg19 NA AF060515 CDS-3'UTR Inter-chr q32.2 p13.11 118972 ChimerSeq ChiTaRs ChiTaRs B4GALT5-HSP90AA1 B4GALT5 chr20 48252918 HSP90AA1 chr14 102549382 Exonic hg19 NA BU955750 Out-of-frame Inter-chr q13.13 q32.31 Oncogene 118973 ChimerSeq ChiTaRs ChiTaRs TASP1-AZIN1 TASP1 chr20 13527677 AZIN1 chr8 103855779 Exonic hg19 NA DA410167 Out-of-frame Inter-chr p12.1 q22.3 118974 ChimerSeq ChiTaRs ChiTaRs RELT-NADSYN1 RELT chr11 73087545 NADSYN1 chr11 71189437 Exonic hg19 NA BU500775 Out-of-frame Intra-chr q13.4 q13.4 118975 ChimerSeq ChiTaRs ChiTaRs BRAP-CPT1B BRAP chr12 112123760 CPT1B chr22 51015874 Exonic hg19 NA DB055888 Out-of-frame Inter-chr q24.12 q13.33 118976 ChimerSeq ChiTaRs ChiTaRs KIAA0247-FAM131B KIAA0247 chr14 70125394 FAM131B chr7 143051281 Exonic hg19 NA DA796945 Out-of-frame Inter-chr q34 118977 ChimerSeq ChiTaRs ChiTaRs YLPM1-EPHB6 YLPM1 chr14 75265473 EPHB6 chr7 142568562 Exonic hg19 NA AX746751 Out-of-frame Inter-chr q24.3 q34 Oncogene Tumor suppressor gene 118978 ChimerSeq ChiTaRs ChiTaRs TNNC2-HSPB1 TNNC2 chr20 44455951 HSPB1 chr7 75932242 Exonic hg19 NA DA893722 Out-of-frame Inter-chr q13.12 q11.23 118979 ChimerSeq ChiTaRs ChiTaRs TFIP11-U2AF1 TFIP11 chr22 26890581 U2AF1 chr21 44521362 Exonic hg19 NA AI419804 Out-of-frame Inter-chr q12.1 q22.3 Oncogene 118980 ChimerSeq ChiTaRs ChiTaRs SPRED1-MNT SPRED1 chr15 38646250 MNT chr17 2291249 Exonic hg19 NA AA974185 Out-of-frame Inter-chr q14 p13.3 Tumor suppressor gene Transcription factor 118981 ChimerSeq ChiTaRs ChiTaRs KIF1C-MB KIF1C chr17 4927734 MB chr22 36002830 Exonic hg19 NA AJ573178 Out-of-frame Inter-chr p13.2 q12.3 118982 ChimerSeq ChiTaRs ChiTaRs RPL4-LOC653739 RPL4 chr15 66795245 LOC653739 chr7 134832839 Exonic hg19 NA DA300676 Out-of-frame Inter-chr q22.31 118983 ChimerSeq ChiTaRs ChiTaRs ZNF223-RNPS1 ZNF223 chr19 44564641 RNPS1 chr16 2312373 Exonic hg19 NA BM750508 Out-of-frame Inter-chr q13.31 Transcription factor p13.3 118984 ChimerSeq ChiTaRs ChiTaRs C12orf23-NKIRAS1 C12orf23 chr12 107366997 NKIRAS1 chr3 23958639 Exonic hg19 NA CB138416 Out-of-frame Inter-chr p24.2 118985 ChimerSeq ChiTaRs ChiTaRs CYTH1-EIF3H CYTH1 chr17 76778305 EIF3H chr8 117767938 Exonic hg19 NA XX000007 Out-of-frame Inter-chr q25.3 q24.11 118986 ChimerSeq ChiTaRs ChiTaRs MMP2-ZNF169 MMP2 chr16 55519302 ZNF169 chr9 97064740 Exonic hg19 NA R48754 Out-of-frame Inter-chr q12.2 Oncogene q22.32 Transcription factor 118987 ChimerSeq ChiTaRs ChiTaRs P4HB-MAP4K4 P4HB chr17 79818398 MAP4K4 chr2 102459069 Exonic hg19 NA CN345438 Out-of-frame Inter-chr q25.3 q11.2 118988 ChimerSeq ChiTaRs ChiTaRs HBA2-PEG10 HBA2 chr16 223587 PEG10 chr7 94298889 Exonic hg19 NA R10023 Out-of-frame Inter-chr p13.3 q21.3 118989 ChimerSeq ChiTaRs ChiTaRs HMGA2-CCT2 HMGA2 chr12 66358676 CCT2 chr12 69979251 Exonic hg19 NA CN431150 Out-of-frame Intra-chr q14.3 Transcription factor q15 118990 ChimerSeq ChiTaRs ChiTaRs OAZ2-SMARCC1 OAZ2 chr15 64995414 SMARCC1 chr3 47663756 Exonic hg19 NA DA674180 Out-of-frame Inter-chr q22.31 p21.31 Tumor suppressor gene 118991 ChimerSeq ChiTaRs ChiTaRs PRR13-RPL38 PRR13 chr12 53837268 RPL38 chr17 72199826 Exonic hg19 NA AV742653 Out-of-frame Inter-chr q13.13 q25.1 118992 ChimerSeq ChiTaRs ChiTaRs COX6A2-MYL3 COX6A2 chr16 31439682 MYL3 chr3 46899378 Exonic hg19 NA AJ346250 Out-of-frame Inter-chr p11.2 p21.31 118993 ChimerSeq ChiTaRs ChiTaRs TCAP-COMTD1 TCAP chr17 37822402 COMTD1 chr10 76993743 Exonic hg19 NA F26420 Out-of-frame Inter-chr q12 q22.2 118994 ChimerSeq ChiTaRs ChiTaRs RSRC2-NIPBL RSRC2 chr12 123011497 NIPBL chr5 37060997 Exonic hg19 NA AI907228 Out-of-frame Inter-chr q24.31 p13.2 118995 ChimerSeq ChiTaRs ChiTaRs ERVV-2-SDC1 ERVV-2 chr19 53552907 SDC1 chr2 20417153 Exonic hg19 NA BG002190 Out-of-frame Inter-chr q13.41 p24.1 118996 ChimerSeq ChiTaRs ChiTaRs CDK17-SEPT7 CDK17 chr12 96736125 2007_ 9_ 1_ chr7 35930329 Exonic hg19 NA AU121803 Out-of-frame Inter-chr q23.1 118997 ChimerSeq ChiTaRs ChiTaRs MAP4K5-PRKDC MAP4K5 chr14 50945655 PRKDC chr8 48711117 Exonic hg19 NA AU122315 Out-of-frame Inter-chr q22.1 q11.21 Oncogene 118998 ChimerSeq ChiTaRs ChiTaRs RIN2-ZNF479 RIN2 chr20 19876591 ZNF479 chr7 57199992 Exonic hg19 NA AW272393 Out-of-frame Inter-chr p11.23 p11.2 Transcription factor 118999 ChimerSeq ChiTaRs ChiTaRs MALAT1-TG MALAT1 chr11 65272022 TG chr8 133978890 Exonic hg19 NA AU141950 Out-of-frame Inter-chr q13.1 q24.22 119000 ChimerSeq ChiTaRs ChiTaRs TRA@-ATXN7 TRA@ chr14 22901726 ATXN7 chr3 63898416 Exonic hg19 NA AK125397 Out-of-frame Inter-chr q11.2 p14.1 119001 ChimerSeq ChiTaRs ChiTaRs EIF5A-SGSM3 EIF5A chr17 7215318 SGSM3 chr22 40800416 Exonic hg19 NA CN336887 Out-of-frame Inter-chr p13.1 q13.1 119002 ChimerSeq ChiTaRs ChiTaRs SRCAP-CNP SRCAP chr16 30724991 CNP chr17 40128470 Exonic hg19 NA BC032780 Out-of-frame Inter-chr p11.2 Transcription factor q21.2 119003 ChimerSeq ChiTaRs ChiTaRs ZC3H7B-RAB5B ZC3H7B chr22 41716718 RAB5B chr12 56387938 Exonic hg19 NA AI671517 Out-of-frame Inter-chr q13.2 q13.2 119004 ChimerSeq ChiTaRs ChiTaRs CPD-UQCRQ CPD chr17 28706574 UQCRQ chr5 132202579 Exonic hg19 NA AI825854 Out-of-frame Inter-chr q11.2 Tumor suppressor gene q31.1 119005 ChimerSeq ChiTaRs ChiTaRs C3-USP38 C3 chr19 6677920 USP38 chr4 144106570 Exonic hg19 NA AI372004 Out-of-frame Inter-chr p13.3 q31.21 119006 ChimerSeq ChiTaRs ChiTaRs RBM14-RBM4-FAM156B RBM14-RBM4 chr11 66413720 FAM156B chrX 52976461 Exonic hg19 NA AV705851 Out-of-frame Inter-chr q13.2 Tumor suppressor gene p11.22 Tumor suppressor gene 119007 ChimerSeq ChiTaRs ChiTaRs PAFAH1B1-ADNP PAFAH1B1 chr17 2585537 ADNP chr20 49508499 Exonic hg19 NA L25107 Out-of-frame Inter-chr p13.3 Tumor suppressor gene q13.13 Transcription factor 119008 ChimerSeq ChiTaRs ChiTaRs TUBA1A-SNRNP27 TUBA1A chr12 49578816 SNRNP27 chr2 70122273 Exonic hg19 NA AI198453 Out-of-frame Inter-chr q13.12 p13.3 119009 ChimerSeq ChiTaRs ChiTaRs COL1A1-EMILIN1 COL1A1 chr17 48278973 EMILIN1 chr2 27301838 Exonic hg19 NA CN342202 Out-of-frame Inter-chr q21.33 Oncogene p23.3 119010 ChimerSeq ChiTaRs ChiTaRs TOMM40-BCAP29 TOMM40 chr19 45406913 BCAP29 chr7 107259848 Exonic hg19 NA BE908928 Out-of-frame Inter-chr q13.32 119011 ChimerSeq ChiTaRs ChiTaRs MALAT1-SFXN1 MALAT1 chr11 65266901 SFXN1 chr5 174905593 Exonic hg19 NA AK022287 Out-of-frame Inter-chr q13.1 q35.2 119012 ChimerSeq ChiTaRs ChiTaRs NEDD8-MDP1-CDA NEDD8-MDP1 chr14 24701571 CDA chr1 20945065 Exonic hg19 NA BM850111 Out-of-frame Inter-chr q12 p36.12 119013 ChimerSeq ChiTaRs ChiTaRs PRR13-HNRNPA2B1 PRR13 chr12 53837329 HNRNPA2B1 chr7 26232151 Exonic hg19 NA DB136988 Out-of-frame Inter-chr q13.13 p15.2 119014 ChimerSeq ChiTaRs ChiTaRs ZNF776-APLP2 ZNF776 chr19 58266002 APLP2 chr11 129979387 Exonic hg19 NA DB177833 Out-of-frame Inter-chr q13.43 Transcription factor q24.3 119015 ChimerSeq ChiTaRs ChiTaRs RPL4-HS6ST3 RPL4 chr15 66795245 HS6ST3 chr13 97487488 Exonic hg19 NA DA783707 Out-of-frame Inter-chr q22.31 q32.1 119016 ChimerSeq ChiTaRs ChiTaRs ATP5B-PTGES3 ATP5B chr12 57033790 PTGES3 chr12 57076115 Exonic hg19 NA AW852155 Out-of-frame Intra-chr q13.3 q13.3 119017 ChimerSeq ChiTaRs ChiTaRs CALM1-UNC5CL CALM1 chr14 90872653 UNC5CL chr6 41029533 Exonic hg19 NA AA496229 Out-of-frame Inter-chr q32.11 p21.1 119018 ChimerSeq ChiTaRs ChiTaRs EBI3-PPP6R1 EBI3 chr19 4237212 PPP6R1 chr19 55751226 Exonic hg19 NA AA367537 Out-of-frame Intra-chr p13.3 q13.42 119019 ChimerSeq ChiTaRs ChiTaRs MALAT1-USO1 MALAT1 chr11 65267967 USO1 chr4 76721511 Exonic hg19 NA T30870 Out-of-frame Inter-chr q13.1 q21.1 119020 ChimerSeq ChiTaRs ChiTaRs QTRT1-IRF2BP2 QTRT1 chr19 10824041 IRF2BP2 chr1 234743504 Exonic hg19 NA AI919001 Out-of-frame Inter-chr p13.2 q42.3 119021 ChimerSeq ChiTaRs ChiTaRs SPINT1-DTWD2 SPINT1 chr15 41149662 DTWD2 chr5 118309674 Exonic hg19 NA BF242456 Out-of-frame Inter-chr q15.1 q23.1 119022 ChimerSeq ChiTaRs ChiTaRs PDCD7-CAPNS1 PDCD7 chr15 65426160 CAPNS1 chr19 36632042 Exonic hg19 NA BG767436 Out-of-frame Inter-chr q22.31 q13.12 119023 ChimerSeq ChiTaRs ChiTaRs RPL38-CITED1 RPL38 chr17 72206007 CITED1 chrX 71526441 Exonic hg19 NA BE391347 Out-of-frame Inter-chr q25.1 q13.1 119024 ChimerSeq ChiTaRs ChiTaRs FAU-MIR5095 FAU chr11 64888234 MIR5095 chr20 55966720 Exonic hg19 NA X75315 Out-of-frame Inter-chr q13.1 p32.3 119025 ChimerSeq ChiTaRs ChiTaRs RPL13-TNFRSF21 RPL13 chr16 89627753 TNFRSF21 chr6 47254163 Exonic hg19 NA DB231778 Out-of-frame Inter-chr q24.3 p12.3 119026 ChimerSeq ChiTaRs ChiTaRs GTF2F1-TRBV20-1 GTF2F1 chr19 6381020 TRBV20-1 chr16 2138064 Exonic hg19 NA BM703996 Out-of-frame Inter-chr p13.3 119027 ChimerSeq ChiTaRs ChiTaRs HSPBP1-SF3B2 HSPBP1 chr19 55791468 SF3B2 chr11 65828125 Exonic hg19 NA BC051237 Out-of-frame Inter-chr q13.42 q13.1 119028 ChimerSeq ChiTaRs ChiTaRs PSMB6-ANKRD27 PSMB6 chr17 4701354 ANKRD27 chr19 33095169 Exonic hg19 NA CN430188 Out-of-frame Inter-chr p13.2 q13.11 119029 ChimerSeq ChiTaRs ChiTaRs LTBP2-PLCB2 LTBP2 chr14 75038796 PLCB2 chr15 40583313 Exonic hg19 NA DA468797 Out-of-frame Inter-chr q24.3 q15.1 119030 ChimerSeq ChiTaRs ChiTaRs HSPA8-ALDH1A1 HSPA8 chr11 122930129 ALDH1A1 chr9 75531952 Exonic hg19 NA DA668305 Out-of-frame Inter-chr q24.1 q21.13 119031 ChimerSeq ChiTaRs ChiTaRs SLCO2B1-FURIN SLCO2B1 chr11 74869423 FURIN chr15 91422933 Exonic hg19 NA BF990968 Out-of-frame Inter-chr q13.4 q26.1 119032 ChimerSeq ChiTaRs ChiTaRs SDSL-MBOAT7 SDSL chr12 113874629 MBOAT7 chr19 54677112 Exonic hg19 NA AV726722 Out-of-frame Inter-chr q24.13 119033 ChimerSeq ChiTaRs ChiTaRs CCDC11-CCDC144C CCDC11 chr18 47765053 CCDC144C chr17 20279411 Exonic hg19 NA CD244406 Out-of-frame Inter-chr 119034 ChimerSeq ChiTaRs ChiTaRs MTSS1L-CSF1R MTSS1L chr16 70707897 CSF1R chr5 149474444 Exonic hg19 NA BG566804 Out-of-frame Inter-chr q22.1 q32 Oncogene 119035 ChimerSeq ChiTaRs ChiTaRs CYP19A1-MYO1C CYP19A1 chr15 51630792 MYO1C chr17 1371308 Exonic hg19 NA DA833622 Out-of-frame Inter-chr q21.2 p13.3 119036 ChimerSeq ChiTaRs ChiTaRs PTPN1-ERF PTPN1 chr20 49201107 ERF chr19 42752229 Exonic hg19 NA BU682148 Out-of-frame Inter-chr q13.13 Tumor suppressor gene q13.2 Tumor suppressor gene Transcription factor 119037 ChimerSeq ChiTaRs ChiTaRs MPG-ENTPD6 MPG chr16 135401 ENTPD6 chr20 25187278 Exonic hg19 NA EL582886 Out-of-frame Inter-chr p13.3 p11.21 119038 ChimerSeq ChiTaRs ChiTaRs MRPL10-PLP1 MRPL10 chr17 45901092 PLP1 chrX 103045970 Exonic hg19 NA ES316348 Out-of-frame Inter-chr q21.32 q22.2 119039 ChimerSeq ChiTaRs ChiTaRs AKT1-PPP3R1 AKT1 chr14 105261851 PPP3R1 chr2 68405988 Exonic hg19 NA BC063408 5'UTR-3'UTR Inter-chr q32.33 AGC:Akt Oncogene p14 119040 ChimerSeq ChiTaRs ChiTaRs SEZ6L-CDH22 SEZ6L chr22 26753638 CDH22 chr20 44906957 Exonic hg19 NA AI631714 Out-of-frame Inter-chr q12.1 q13.12 119041 ChimerSeq ChiTaRs ChiTaRs PSMC5-ATP5A1 PSMC5 chr17 61909296 ATP5A1 chr18 43669875 Exonic hg19 NA AU143199 Out-of-frame Inter-chr q23.3 q21.1 119042 ChimerSeq ChiTaRs ChiTaRs RNU12-HSPA8 RNU12 chr22 43011399 HSPA8 chr11 122931313 Exonic hg19 NA DA378775 5'UTR-CDS Inter-chr q13.2 q24.1 119043 ChimerSeq ChiTaRs ChiTaRs EIF3D-TNRC18 EIF3D chr22 36907007 TNRC18 chr7 5347525 Exonic hg19 NA BM974825 Out-of-frame Inter-chr q12.3 p22.1 119044 ChimerSeq ChiTaRs ChiTaRs EWSR1-MARS EWSR1 chr22 29683123 MARS chr12 57910561 Exonic hg19 NA X92120 CDS-3'UTR Inter-chr q12.2 q13.3 119045 ChimerSeq ChiTaRs ChiTaRs PHB2-COL3A1 PHB2 chr12 7074877 COL3A1 chr2 189873840 Exonic hg19 NA AI207628 In-Frame Inter-chr p13.31 q32.2 119046 ChimerSeq ChiTaRs ChiTaRs CCPG1-NAT10 CCPG1 chr15 55663797 NAT10 chr11 34127170 Exonic hg19 NA DB293567 Out-of-frame Inter-chr q21.3 p13 119047 ChimerSeq ChiTaRs ChiTaRs COTL1-G6PC3 COTL1 chr16 84599794 G6PC3 chr17 42153420 Exonic hg19 NA BP430643 Out-of-frame Inter-chr q24.1 q21.31 119048 ChimerSeq ChiTaRs ChiTaRs HAGHL-DHX38 HAGHL chr16 778868 DHX38 chr16 72146677 Exonic hg19 NA AB209331 Out-of-frame Intra-chr p13.3 q22.2 119049 ChimerSeq ChiTaRs ChiTaRs FBXO7-LGI3 FBXO7 chr22 32875028 LGI3 chr8 22005371 Exonic hg19 NA BQ719999 Out-of-frame Inter-chr q12.3 p21.3 119050 ChimerSeq ChiTaRs ChiTaRs TMBIM6-INPP1 TMBIM6 chr12 50135395 INPP1 chr2 191231419 Exonic hg19 NA CK001646 Out-of-frame Inter-chr q13.12 q32.2 119051 ChimerSeq ChiTaRs ChiTaRs SEPT5-OS9 2005_ 9_ 1_ chr22 19707951 OS9 chr12 58114989 Exonic hg19 NA BF921446 Out-of-frame Inter-chr q13.3 119052 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65267145 MALAT1 chr11 65266675 Exonic hg19 NA AW891969 Out-of-frame Intra-chr q13.1 q13.1 119053 ChimerSeq ChiTaRs ChiTaRs RNU12-TRO RNU12 chr22 43011400 TRO chrX 54947257 Exonic hg19 NA DA801105 Out-of-frame Inter-chr q13.2 p11.21 119054 ChimerSeq ChiTaRs ChiTaRs MALAT1-CYLC2 MALAT1 chr11 65267535 CYLC2 chr9 105767419 Exonic hg19 NA BQ428924 Out-of-frame Inter-chr q13.1 q31.1 119055 ChimerSeq ChiTaRs ChiTaRs NECAB3-DCN NECAB3 chr20 32261408 DCN chr12 91550912 Exonic hg19 NA BG927599 Out-of-frame Inter-chr q11.22 q21.33 Tumor suppressor gene 119056 ChimerSeq ChiTaRs ChiTaRs WDR16-RALGAPA2 WDR16 chr17 9503500 RALGAPA2 chr20 20585849 Exonic hg19 NA AK309650 In-Frame Inter-chr p11.23 119057 ChimerSeq ChiTaRs ChiTaRs MALAT1-NUP210 MALAT1 chr11 65268673 NUP210 chr3 13367381 Exonic hg19 NA AW867470 Out-of-frame Inter-chr q13.1 p25.1 119058 ChimerSeq ChiTaRs ChiTaRs SHC4-STAG3L1 SHC4 chr15 49172002 STAG3L1 chr7 74991265 Exonic hg19 NA BU625857 Out-of-frame Inter-chr q21.1 q11.23 119059 ChimerSeq ChiTaRs ChiTaRs PTTG1IP-GEMIN2 PTTG1IP chr21 46271067 GEMIN2 chr14 39591695 Exonic hg19 NA BF804041 Out-of-frame Inter-chr q22.3 q21.1 119060 ChimerSeq ChiTaRs ChiTaRs MTMR3-APOH MTMR3 chr22 30279348 APOH chr17 64216676 Exonic hg19 NA BG824141 5'UTR-CDS Inter-chr q12.2 q24.2 119061 ChimerSeq ChiTaRs ChiTaRs SRRM2-PTGDS SRRM2 chr16 2813449 PTGDS chr9 139871956 Exonic hg19 NA Z17825 Out-of-frame Inter-chr p13.3 q34.3 119062 ChimerSeq ChiTaRs ChiTaRs ZNF286B-FBRS ZNF286B chr17 18581245 FBRS chr16 30673930 Exonic hg19 NA AI566787 Out-of-frame Inter-chr p11.2 Transcription factor p11.2 119063 ChimerSeq ChiTaRs ChiTaRs ZNF836-GAPDH ZNF836 chr19 52659692 GAPDH chr12 6647484 Exonic hg19 NA DB548780 Out-of-frame Inter-chr q13.41 Transcription factor p13.31 119064 ChimerSeq ChiTaRs ChiTaRs USP22-PRIM1 USP22 chr17 20919119 PRIM1 chr12 57126944 Exonic hg19 NA AL162082 Out-of-frame Inter-chr p11.2 q13.3 119065 ChimerSeq ChiTaRs ChiTaRs ZNF708-UBD ZNF708 chr19 21474161 UBD chr6 826724 Exonic hg19 NA BG055615 Out-of-frame Inter-chr p12 Transcription factor 119066 ChimerSeq ChiTaRs ChiTaRs BOLA2-MTDH BOLA2 chr16 29461058 MTDH chr8 98701264 Exonic hg19 NA AI380636 Out-of-frame Inter-chr p11.2 q22.1 119067 ChimerSeq ChiTaRs ChiTaRs SCAND1-PCNP SCAND1 chr20 34542422 PCNP chr3 101295294 Exonic hg19 NA BU566891 Out-of-frame Inter-chr q11.23 q12.3 119068 ChimerSeq ChiTaRs ChiTaRs IFT81-PRKAA1 IFT81 chr12 110641758 PRKAA1 chr5 40767599 Exonic hg19 NA DA340341 Out-of-frame Inter-chr q24.11 p13.1 Tumor suppressor gene 119069 ChimerSeq ChiTaRs ChiTaRs CCDC84-WNK1 CCDC84 chr11 118886466 WNK1 chr12 994699 Exonic hg19 NA AI671743 Out-of-frame Inter-chr p13.33 119070 ChimerSeq ChiTaRs ChiTaRs RPS25-STK4 RPS25 chr11 118889054 STK4 chr20 43707835 Exonic hg19 NA BP271042 Out-of-frame Inter-chr q13.12 119071 ChimerSeq ChiTaRs ChiTaRs BOLA2-PMPCA BOLA2 chr16 30133330 PMPCA chr9 139316289 Exonic hg19 NA BE937971 Out-of-frame Inter-chr p11.2 q34.3 119072 ChimerSeq ChiTaRs ChiTaRs GABRB3-FAF1 GABRB3 chr15 27018898 FAF1 chr1 51253729 Exonic hg19 NA DA493815 Out-of-frame Inter-chr q12 p32.3 119073 ChimerSeq ChiTaRs ChiTaRs SERPINB4-WIPI1 SERPINB4 chr18 61310840 WIPI1 chr17 66426015 Exonic hg19 NA AW796682 Out-of-frame Inter-chr q21.33 q24.2 119074 ChimerSeq ChiTaRs ChiTaRs USP35-ATAD3A USP35 chr11 77907301 ATAD3A chr1 1452757 Exonic hg19 NA AK310572 Out-of-frame Inter-chr q14.1 p36.33 119075 ChimerSeq ChiTaRs ChiTaRs ALDH1A2-IGFBP5 ALDH1A2 chr15 58245813 IGFBP5 chr2 217541019 Exonic hg19 NA BM677567 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q35 Tumor suppressor gene 119076 ChimerSeq ChiTaRs ChiTaRs NPIPB7-TBC1D24 NPIPB7 chr16 28548923 TBC1D24 chr16 2569270 Exonic hg19 NA CA307227 Out-of-frame Intra-chr p12.1 p13.3 119077 ChimerSeq ChiTaRs ChiTaRs PSME2-RPS20 PSME2 chr14 24615814 RPS20 chr8 56985619 Exonic hg19 NA BF205135 Out-of-frame Inter-chr q12 q12.1 119078 ChimerSeq ChiTaRs ChiTaRs ACTN4-URM1 ACTN4 chr19 39191659 URM1 chr9 131152132 Exonic hg19 NA BQ894415 Out-of-frame Inter-chr q34.11 119079 ChimerSeq ChiTaRs ChiTaRs PITPNM1-TFAP2A PITPNM1 chr11 67271391 TFAP2A chr6 10398905 Exonic hg19 NA BM724362 Out-of-frame Inter-chr q13.2 p24.3 Tumor suppressor gene Transcription factor 119080 ChimerSeq ChiTaRs ChiTaRs ACACA-STAC2 ACACA chr17 35479523 STAC2 chr17 37374348 Exonic hg19 NA XX000005 Out-of-frame Intra-chr q12 119081 ChimerSeq ChiTaRs ChiTaRs MALAT1-HSP90AA1 MALAT1 chr11 65267380 HSP90AA1 chr14 102551633 Exonic hg19 NA CB135099 Out-of-frame Inter-chr q13.1 q32.31 Oncogene 119082 ChimerSeq ChiTaRs ChiTaRs KIF18B-CALR KIF18B chr17 43005610 CALR chr19 13049435 Exonic hg19 NA BU191818 Out-of-frame Inter-chr q21.31 p13.13 119083 ChimerSeq ChiTaRs ChiTaRs CD63-HCFC1R1 CD63 chr12 56122141 HCFC1R1 chr16 3072761 Exonic hg19 NA AA037214 Out-of-frame Inter-chr q13.2 p13.3 119084 ChimerSeq ChiTaRs ChiTaRs SLC25A1-HSPA13 SLC25A1 chr22 19164653 HSPA13 chr21 15743529 Exonic hg19 NA D16945 Out-of-frame Inter-chr q11.21 q11.2 119085 ChimerSeq ChiTaRs ChiTaRs ZNF793-ZYG11B ZNF793 chr19 38027982 ZYG11B chr1 53211299 Exonic hg19 NA AL518023 Out-of-frame Inter-chr q13.12 Transcription factor p32.3 119086 ChimerSeq ChiTaRs ChiTaRs HIF1A-CD63 HIF1A chr14 62187177 CD63 chr12 56121079 Exonic hg19 NA BP330336 Out-of-frame Inter-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q13.2 119087 ChimerSeq ChiTaRs ChiTaRs MALAT1-S100A10 MALAT1 chr11 65267975 S100A10 chr1 151955414 Exonic hg19 NA C00609 Out-of-frame Inter-chr q13.1 q21.3 119088 ChimerSeq ChiTaRs ChiTaRs MBP-ALMS1 MBP chr18 74691133 ALMS1 chr2 73823343 Exonic hg19 NA AV724910 Out-of-frame Inter-chr q23 p13.1 119089 ChimerSeq ChiTaRs ChiTaRs EMP1-DNAJA2 EMP1 chr12 13369379 DNAJA2 chr16 46993227 Exonic hg19 NA BM785881 Out-of-frame Inter-chr p13.1 Tumor suppressor gene q11.2 119090 ChimerSeq ChiTaRs ChiTaRs MALAT1-TPD52L2 MALAT1 chr11 65266567 TPD52L2 chr20 62505116 Exonic hg19 NA DA280558 Out-of-frame Inter-chr q13.1 q13.33 119091 ChimerSeq ChiTaRs ChiTaRs IST1-MYOF IST1 chr16 71955338 MYOF chr10 95144820 Exonic hg19 NA AW366614 Out-of-frame Inter-chr q22.2 q23.33 119092 ChimerSeq ChiTaRs ChiTaRs CDK5RAP3-TRERF1 CDK5RAP3 chr17 46059133 TRERF1 chr6 42236368 Exonic hg19 NA AI392977 Out-of-frame Inter-chr q21.32 p21.1 Transcription factor 119093 ChimerSeq ChiTaRs ChiTaRs RNF213-PSAP RNF213 chr17 78355957 PSAP chr10 73579325 Exonic hg19 NA BF853810 Out-of-frame Inter-chr q25.3 Oncogene q22.1 119094 ChimerSeq ChiTaRs ChiTaRs TNNI3-USF2 TNNI3 chr19 55669080 USF2 chr19 35770334 Exonic hg19 NA AJ710545 Out-of-frame Intra-chr q13.42 q13.12 Transcription factor 119095 ChimerSeq ChiTaRs ChiTaRs ARPC3-ARPC3 ARPC3 chr12 110873961 ARPC3 chr12 110874362 Exonic hg19 NA AI433581 Out-of-frame Intra-chr q24.11 q24.11 119096 ChimerSeq ChiTaRs ChiTaRs SEZ6L-GAP43 SEZ6L chr22 26702013 GAP43 chr3 115395138 Exonic hg19 NA T07418 Out-of-frame Inter-chr q12.1 q13.31 119097 ChimerSeq ChiTaRs ChiTaRs RPL18-LGMN RPL18 chr19 49122421 LGMN chr14 93170154 Exonic hg19 NA CN269392 Out-of-frame Inter-chr q13.33 q32.12 119098 ChimerSeq ChiTaRs ChiTaRs SSSCA1-LYPLA1 SSSCA1 chr11 65339230 LYPLA1 chr8 54960358 Exonic hg19 NA AK296257 Out-of-frame Inter-chr q13.1 q11.23 119099 ChimerSeq ChiTaRs ChiTaRs SLC30A4-ETV1 SLC30A4 chr15 45806161 ETV1 chr7 13971281 Exonic hg19 NA EF632112 Out-of-frame Inter-chr q21.1 p21.2 Oncogene Transcription factor 119100 ChimerSeq ChiTaRs ChiTaRs ZNF100-XPO1 ZNF100 chr19 21913371 XPO1 chr2 61749775 Exonic hg19 NA DB158037 Out-of-frame Inter-chr p12 Transcription factor p15 Oncogene 119101 ChimerSeq ChiTaRs ChiTaRs PAFAH1B1-ELOVL7 PAFAH1B1 chr17 2541418 ELOVL7 chr5 60047749 Exonic hg19 NA AI934581 Out-of-frame Inter-chr p13.3 Tumor suppressor gene q12.1 119102 ChimerSeq ChiTaRs ChiTaRs MBP-FEZ1 MBP chr18 74691955 FEZ1 chr11 125325907 Exonic hg19 NA AV727992 Out-of-frame Inter-chr q23 q24.2 Tumor suppressor gene 119103 ChimerSeq ChiTaRs ChiTaRs PHF20-TP73-AS1 PHF20 chr20 34537699 TP73-AS1 chr1 3653971 Exonic hg19 NA BF977691 Out-of-frame Inter-chr q11.22 Transcription factor p36.32 Tumor suppressor gene Transcription factor 119104 ChimerSeq ChiTaRs ChiTaRs MAVS-ACBD3 MAVS chr20 3856132 ACBD3 chr1 226332685 Exonic hg19 NA BE869711 Out-of-frame Inter-chr p13 q42.12 119105 ChimerSeq ChiTaRs ChiTaRs CSH1-FCGR2A CSH1 chr17 61973913 FCGR2A chr1 161488421 Exonic hg19 NA AW949744 Out-of-frame Inter-chr q23.3 q23.3 119106 ChimerSeq ChiTaRs ChiTaRs TRAPPC1-QARS TRAPPC1 chr17 7833990 QARS chr3 49137626 Exonic hg19 NA BU631572 Out-of-frame Inter-chr p13.1 p21.31 119107 ChimerSeq ChiTaRs ChiTaRs GPI-FDPS GPI chr19 34870455 FDPS chr1 155290342 Exonic hg19 NA CB046420 Out-of-frame Inter-chr q22 119108 ChimerSeq ChiTaRs ChiTaRs APLP1-B2M APLP1 chr19 36370261 B2M chr15 45003724 Exonic hg19 NA BI195738 Out-of-frame Inter-chr q13.12 Oncogene 119109 ChimerSeq ChiTaRs ChiTaRs MALAT1-B3GNT2 MALAT1 chr11 65273163 B3GNT2 chr2 62449387 Exonic hg19 NA AF288209 Out-of-frame Inter-chr q13.1 p15 119110 ChimerSeq ChiTaRs ChiTaRs FBXO34-PDXDC1 FBXO34 chr14 55836241 PDXDC1 chr16 15131879 Exonic hg19 NA BU930535 Out-of-frame Inter-chr q22.3 p13.11 119111 ChimerSeq ChiTaRs ChiTaRs BCAM-AHSA2 BCAM chr19 45314604 AHSA2 chr2 61406116 Exonic hg19 NA BQ897931 Out-of-frame Inter-chr q13.32 p15 119112 ChimerSeq ChiTaRs ChiTaRs SRSF1-LMO4 SRSF1 chr17 56083716 LMO4 chr1 87810839 Exonic hg19 NA CN301095 Out-of-frame Inter-chr q22 p22.3 119113 ChimerSeq ChiTaRs ChiTaRs GLG1-NUMA1 GLG1 chr16 74486977 NUMA1 chr11 71723464 Exonic hg19 NA CA446212 Out-of-frame Inter-chr q23.1 q13.4 Oncogene 119114 ChimerSeq ChiTaRs ChiTaRs ANKRD10-PKMYT1 ANKRD10 chr13 111567342 PKMYT1 chr16 3024283 Exonic hg19 NA BF203978 Out-of-frame Inter-chr q34 p13.3 119115 ChimerSeq ChiTaRs ChiTaRs ZNF738-KIF1B ZNF738 chr19 21558767 KIF1B chr1 10292306 Exonic hg19 NA DA666479 Out-of-frame Inter-chr p12 p36.22 Tumor suppressor gene 119116 ChimerSeq ChiTaRs ChiTaRs ITPRIPL2-DSG2 ITPRIPL2 chr16 19131631 DSG2 chr18 29127527 Exonic hg19 NA BE748457 Out-of-frame Inter-chr p12.3 q12.1 119117 ChimerSeq ChiTaRs ChiTaRs PAK1-FANCA PAK1 chr11 77086787 FANCA chr16 89833594 Exonic hg19 NA BF089164 Out-of-frame Inter-chr q14.1 STE:STE20 q24.3 Oncogene 119118 ChimerSeq ChiTaRs ChiTaRs KDELR1-AK7 KDELR1 chr19 48894775 AK7 chr14 96944903 Exonic hg19 NA CN278364 Out-of-frame Inter-chr q13.33 q32.2 119119 ChimerSeq ChiTaRs ChiTaRs MRPL51-SRSF5 MRPL51 chr12 6602414 SRSF5 chr14 70238296 Exonic hg19 NA BF675494 Out-of-frame Inter-chr p13.31 q24.1 119120 ChimerSeq ChiTaRs ChiTaRs MT2A-CDK2 MT2A chr16 56643384 CDK2 chr12 56360614 Exonic hg19 NA AU125800 Out-of-frame Inter-chr q13 Tumor suppressor gene q13.2 CMGC:CDK Tumor suppressor gene 119121 ChimerSeq ChiTaRs ChiTaRs METRNL-UBC METRNL chr17 81052592 UBC chr12 125396659 Exonic hg19 NA CA310301 Out-of-frame Inter-chr q24.31 119122 ChimerSeq ChiTaRs ChiTaRs POLR2F-LRFN3 POLR2F chr22 38368717 LRFN3 chr19 36428300 Exonic hg19 NA AI367319 Out-of-frame Inter-chr q13.1 q13.12 119123 ChimerSeq ChiTaRs ChiTaRs SNORD104-HNRNPUL1 SNORD104 chr17 62223512 HNRNPUL1 chr19 41770276 Exonic hg19 NA DB082610 Out-of-frame Inter-chr q23.3 q13.2 119124 ChimerSeq ChiTaRs ChiTaRs PSMA7-RBBP7 PSMA7 chr20 60714965 RBBP7 chrX 16870624 Exonic hg19 NA BQ685104 Out-of-frame Inter-chr q13.33 p22.2 Tumor suppressor gene 119125 ChimerSeq ChiTaRs ChiTaRs CHEK1-DCAF8 CHEK1 chr11 125499303 DCAF8 chr1 160248873 Exonic hg19 NA CB142976 Out-of-frame Inter-chr q24.2 Oncogene Tumor suppressor gene q23.2 119126 ChimerSeq ChiTaRs ChiTaRs UCP2-TCF20 UCP2 chr11 73685981 TCF20 chr22 42606837 Exonic hg19 NA CD366990 Out-of-frame Inter-chr q13.4 Transcription factor 119127 ChimerSeq ChiTaRs ChiTaRs HDAC7-CHUK HDAC7 chr12 48213671 CHUK chr10 101964366 Exonic hg19 NA DA482203 Out-of-frame Inter-chr q13.11 q24.31 Tumor suppressor gene 119128 ChimerSeq ChiTaRs ChiTaRs BOLA2-LDHA BOLA2 chr16 29822485 LDHA chr11 18424385 Exonic hg19 NA CA424367 Out-of-frame Inter-chr p11.2 p15.1 119129 ChimerSeq ChiTaRs ChiTaRs C17orf76-AS1-COL1A2 C17orf76-AS1 chr17 16344707 COL1A2 chr7 94056357 Exonic hg19 NA AA378061 Out-of-frame Inter-chr q21.3 Tumor suppressor gene 119130 ChimerSeq ChiTaRs ChiTaRs ZBED4-DCTN1 ZBED4 chr22 50277430 DCTN1 chr2 74598795 Exonic hg19 NA DB293431 Out-of-frame Inter-chr q13.33 Transcription factor p13.1 119131 ChimerSeq ChiTaRs ChiTaRs PLXNB2-RBM25 PLXNB2 chr22 50713472 RBM25 chr14 73586478 Exonic hg19 NA BM979599 Out-of-frame Inter-chr q13.33 q24.2 119132 ChimerSeq ChiTaRs ChiTaRs SYNRG-SYNRG SYNRG chr17 35877057 SYNRG chr17 35875859 Exonic hg19 NA AA233344 Out-of-frame Intra-chr 119133 ChimerSeq ChiTaRs ChiTaRs MLKL-QSOX1 MLKL chr16 74712844 QSOX1 chr1 180158732 Exonic hg19 NA CF131680 Out-of-frame Inter-chr q23.1 TKL:TKL-Unique q25.2 119134 ChimerSeq ChiTaRs ChiTaRs VPS29-VPS29 VPS29 chr12 110929600 VPS29 chr12 110930801 Exonic hg19 NA AA400996 Out-of-frame Intra-chr q24.11 q24.11 119135 ChimerSeq ChiTaRs ChiTaRs STK24-RNF4 STK24 chr13 99127598 RNF4 chr4 2470870 Exonic hg19 NA AU125424 Out-of-frame Inter-chr q32.2 p16.3 119136 ChimerSeq ChiTaRs ChiTaRs PSMA4-PSAP PSMA4 chr15 78841523 PSAP chr10 73578373 Exonic hg19 NA BU190440 3'UTR-CDS Inter-chr q25.1 q22.1 119137 ChimerSeq ChiTaRs ChiTaRs TAT-PPP2R1B TAT chr16 71601625 PPP2R1B chr11 111610550 Exonic hg19 NA BG562569 Out-of-frame Inter-chr q22.2 Tumor suppressor gene q23.1 Tumor suppressor gene 119138 ChimerSeq ChiTaRs ChiTaRs DDX24-SIAE DDX24 chr14 94521372 SIAE chr11 124543780 Exonic hg19 NA Z48570 Out-of-frame Inter-chr q24.2 119139 ChimerSeq ChiTaRs ChiTaRs BLCAP-USP9X BLCAP chr20 36149730 USP9X chrX 41075549 Exonic hg19 NA DA507643 Out-of-frame Inter-chr q11.23 Tumor suppressor gene p11.4 Oncogene 119140 ChimerSeq ChiTaRs ChiTaRs ORC6-CST7 ORC6 chr16 46726341 CST7 chr20 24930146 Exonic hg19 NA BP431120 Out-of-frame Inter-chr q11.2 p11.21 119141 ChimerSeq ChiTaRs ChiTaRs DNAJA2-SRP68 DNAJA2 chr16 46989563 SRP68 chr17 74044029 Exonic hg19 NA CD365788 Out-of-frame Inter-chr q11.2 q25.1 119142 ChimerSeq ChiTaRs ChiTaRs IFT140-ATP6V0A1 IFT140 chr16 1560730 ATP6V0A1 chr17 40673115 Exonic hg19 NA R84487 Out-of-frame Inter-chr p13.3 q21.2 119143 ChimerSeq ChiTaRs ChiTaRs HSP90AA1-ARHGAP32 HSP90AA1 chr14 102549393 ARHGAP32 chr11 128840740 Exonic hg19 NA BP224230 Out-of-frame Inter-chr q32.31 Oncogene q24.3 119144 ChimerSeq ChiTaRs ChiTaRs KIAA1467-MALAT1 KIAA1467 chr12 13236383 MALAT1 chr11 65268480 Exonic hg19 NA CA450563 3'UTR-5'UTR Inter-chr q13.1 119145 ChimerSeq ChiTaRs ChiTaRs ZFYVE21-RERE ZFYVE21 chr14 104200307 RERE chr1 8421346 Exonic hg19 NA AA452109 Out-of-frame Inter-chr q32.33 p36.23 119146 ChimerSeq ChiTaRs ChiTaRs CCDC47-LINC00299 CCDC47 chr17 61841550 LINC00299 chr2 8196576 Exonic hg19 NA BP329425 CDS-3'UTR Inter-chr q23.3 p25.1 119147 ChimerSeq ChiTaRs ChiTaRs COL18A1-DDRGK1 COL18A1 chr21 46933634 DDRGK1 chr20 3171224 Exonic hg19 NA BQ448372 3'UTR-3'UTR Inter-chr q22.3 p13 119148 ChimerSeq ChiTaRs ChiTaRs ING4-ATP2B4 ING4 chr12 6772290 ATP2B4 chr1 203710233 Exonic hg19 NA DB140747 Out-of-frame Inter-chr p13.31 Oncogene Tumor suppressor gene q32.1 119149 ChimerSeq ChiTaRs ChiTaRs TRAF7-EIF4A1 TRAF7 chr16 2228046 EIF4A1 chr17 7482008 Exonic hg19 NA CB119692 Out-of-frame Inter-chr p13.3 Oncogene p13.1 119150 ChimerSeq ChiTaRs ChiTaRs TBC1D24-FAM98A TBC1D24 chr16 2570219 FAM98A chr2 33810406 Exonic hg19 NA AI129118 Out-of-frame Inter-chr p13.3 p22.3 119151 ChimerSeq ChiTaRs ChiTaRs TLK2-PPM1G TLK2 chr17 60690291 PPM1G chr2 27606283 Exonic hg19 NA BI004476 Out-of-frame Inter-chr q23.2 Other:TLK p23.3 119152 ChimerSeq ChiTaRs ChiTaRs MALAT1-PSPH MALAT1 chr11 65268025 PSPH chr7 56122079 Exonic hg19 NA BQ318623 Out-of-frame Inter-chr q13.1 p11.2 119153 ChimerSeq ChiTaRs ChiTaRs GREM1-TP53RK GREM1 chr15 33025331 TP53RK chr20 45314925 Exonic hg19 NA CF129384 Out-of-frame Inter-chr Tumor suppressor gene q13.12 119154 ChimerSeq ChiTaRs ChiTaRs DPP9-ARHGAP1 DPP9 chr19 4675845 ARHGAP1 chr11 46699468 Exonic hg19 NA AW190431 Out-of-frame Inter-chr p13.3 p11.2 119155 ChimerSeq ChiTaRs ChiTaRs UNC45B-EIF2AK1 UNC45B chr17 33495104 EIF2AK1 chr7 6063902 Exonic hg19 NA Z17841 Out-of-frame Inter-chr q12 p22.1 119156 ChimerSeq ChiTaRs ChiTaRs GRAP-ZNF574 GRAP chr17 18950329 ZNF574 chr19 42582739 Exonic hg19 NA DA434962 Out-of-frame Inter-chr p11.2 q13.2 Transcription factor 119157 ChimerSeq ChiTaRs ChiTaRs TSPAN9-MAML1 TSPAN9 chr12 3320841 MAML1 chr5 179193543 Exonic hg19 NA AA687466 Out-of-frame Inter-chr p13.33 119158 ChimerSeq ChiTaRs ChiTaRs MALAT1-TUBB4A MALAT1 chr11 65266760 TUBB4A chr19 6501331 Exonic hg19 NA DA073851 Out-of-frame Inter-chr q13.1 p13.3 119159 ChimerSeq ChiTaRs ChiTaRs DLST-LOC100507412 DLST chr14 75359576 LOC100507412 chr? 110594 Exonic hg19 NA BP276043 Out-of-frame Inter-chr q24.3 119160 ChimerSeq ChiTaRs ChiTaRs FXYD3-ZNF202 FXYD3 chr19 35614564 ZNF202 chr11 123596885 Exonic hg19 NA AI274165 Out-of-frame Inter-chr q13.12 q24.1 Transcription factor 119161 ChimerSeq ChiTaRs ChiTaRs ODF3B-ZNF609 ODF3B chr22 50968939 ZNF609 chr15 64967501 Exonic hg19 NA AW135599 Out-of-frame Inter-chr q13.33 q22.31 Transcription factor 119162 ChimerSeq ChiTaRs ChiTaRs LRP10-RAB13 LRP10 chr14 23346660 RAB13 chr1 153954127 Exonic hg19 NA AL834518 CDS-3'UTR Inter-chr q11.2 q21.3 119163 ChimerSeq ChiTaRs ChiTaRs PRR14-RPL23 PRR14 chr16 30667544 RPL23 chr17 37006342 Exonic hg19 NA DB573606 Out-of-frame Inter-chr p11.2 q12 119164 ChimerSeq ChiTaRs ChiTaRs ST13-SKIV2L2 ST13 chr22 41221856 SKIV2L2 chr5 54720936 Exonic hg19 NA AW794579 Out-of-frame Inter-chr q13.2 Tumor suppressor gene q11.2 119165 ChimerSeq ChiTaRs ChiTaRs DCN-SSR1 DCN chr12 91576454 SSR1 chr6 7288053 Exonic hg19 NA M14219 Out-of-frame Inter-chr q21.33 Tumor suppressor gene p24.3 119166 ChimerSeq ChiTaRs ChiTaRs SMARCB1-SMARCB1 SMARCB1 chr22 24175782 SMARCB1 chr22 24133946 Exonic hg19 NA BE812485 Out-of-frame Intra-chr q11.23 Oncogene Tumor suppressor gene q11.23 Oncogene Tumor suppressor gene 119167 ChimerSeq ChiTaRs ChiTaRs CARM1-MED26 CARM1 chr19 11033448 MED26 chr19 16629046 Exonic hg19 NA BQ009863 3'UTR-3'UTR Intra-chr p13.2 p13.11 119168 ChimerSeq ChiTaRs ChiTaRs CTDSP2-EPSTI1 CTDSP2 chr12 58213895 EPSTI1 chr13 43500498 Exonic hg19 NA AA910485 Out-of-frame Inter-chr q14.1 q14.11 119169 ChimerSeq ChiTaRs ChiTaRs PPP2R1B-NHP2L1 PPP2R1B chr11 111610344 NHP2L1 chr22 42070195 Exonic hg19 NA BQ329687 Out-of-frame Inter-chr q23.1 Tumor suppressor gene 119170 ChimerSeq ChiTaRs ChiTaRs KCNQ2-ATP6V0B KCNQ2 chr20 62066190 ATP6V0B chr1 44442008 Exonic hg19 NA DA064555 Out-of-frame Inter-chr p34.1 119171 ChimerSeq ChiTaRs ChiTaRs HSPA13-CCDC88C HSPA13 chr21 15744885 CCDC88C chr14 91739598 Exonic hg19 NA AU124561 Out-of-frame Inter-chr q11.2 q32.12 119172 ChimerSeq ChiTaRs ChiTaRs SIRT2-TRIM63 SIRT2 chr19 39390223 TRIM63 chr1 26394018 Exonic hg19 NA DA894739 Out-of-frame Inter-chr Tumor suppressor gene p36.11 119173 ChimerSeq ChiTaRs ChiTaRs COL1A1-LUC7L COL1A1 chr17 48263839 LUC7L chr16 270662 Exonic hg19 NA BF882409 Out-of-frame Inter-chr q21.33 Oncogene p13.3 119174 ChimerSeq ChiTaRs ChiTaRs LTBP2-PLCB2 LTBP2 chr14 75038796 PLCB2 chr15 40580109 Exonic hg19 NA AK095454 Out-of-frame Inter-chr q24.3 q15.1 119175 ChimerSeq ChiTaRs ChiTaRs SIRT7-LOC100130950 SIRT7 chr17 79874456 LOC100130950 chr17 5118480 Exonic hg19 NA AI364110 Out-of-frame Intra-chr q25.3 119176 ChimerSeq ChiTaRs ChiTaRs TMPO-ARPC1A TMPO chr12 98928880 ARPC1A chr7 98957174 Exonic hg19 NA AW393518 Out-of-frame Inter-chr q23.1 q22.1 119177 ChimerSeq ChiTaRs ChiTaRs CHD4-FAM96B CHD4 chr12 6690560 FAM96B chr16 66965962 Exonic hg19 NA BE698608 Out-of-frame Inter-chr p13.31 q22.1 119178 ChimerSeq ChiTaRs ChiTaRs AAAS-MAOB AAAS chr12 53701914 MAOB chrX 43626252 Exonic hg19 NA AW794716 Out-of-frame Inter-chr q13.13 p11.3 119179 ChimerSeq ChiTaRs ChiTaRs CAMKK2-KCNK5 CAMKK2 chr12 121677422 KCNK5 chr6 39196795 Exonic hg19 NA BM836721 Out-of-frame Inter-chr q24.31 p21.2 119180 ChimerSeq ChiTaRs ChiTaRs PSMG2-PI4KAP2 PSMG2 chr18 12696700 PI4KAP2 chr22 21831621 Exonic hg19 NA DW416891 Out-of-frame Inter-chr p11.21 q11.21 119181 ChimerSeq ChiTaRs ChiTaRs GALNS-CCNG2 GALNS chr16 88923331 CCNG2 chr4 78079686 Exonic hg19 NA DN998848 Out-of-frame Inter-chr q24.3 q21.1 119182 ChimerSeq ChiTaRs ChiTaRs PLCZ1-GNPTG PLCZ1 chr12 18845841 GNPTG chr16 1413162 Exonic hg19 NA BU588824 Out-of-frame Inter-chr p12.3 p13.3 119183 ChimerSeq ChiTaRs ChiTaRs CCDC159-RAB27A CCDC159 chr19 11465303 RAB27A chr15 55496585 Exonic hg19 NA BF218939 Out-of-frame Inter-chr p13.2 q21.3 119184 ChimerSeq ChiTaRs ChiTaRs COL1A1-PEAK1 COL1A1 chr17 48261836 PEAK1 chr15 77401032 Exonic hg19 NA AA621525 Out-of-frame Inter-chr q21.33 Oncogene q24.3 119185 ChimerSeq ChiTaRs ChiTaRs ASNA1-GANAB ASNA1 chr19 12859137 GANAB chr11 62392488 Exonic hg19 NA AI339818 3'UTR-3'UTR Inter-chr p13.13 q12.3 Tumor suppressor gene 119186 ChimerSeq ChiTaRs ChiTaRs LGALS1-KLHL29 LGALS1 chr22 38074609 KLHL29 chr2 23931235 Exonic hg19 NA BF245376 Out-of-frame Inter-chr q13.1 p24.1 119187 ChimerSeq ChiTaRs ChiTaRs NF1-GTF2IP1 NF1 chr17 29701369 GTF2IP1 chr7 74601212 Exonic hg19 NA DA769717 Out-of-frame Inter-chr q11.2 Oncogene Tumor suppressor gene q11.23 119188 ChimerSeq ChiTaRs ChiTaRs BCAS3-BCAS3 BCAS3 chr17 59293377 BCAS3 chr17 59299318 Exonic hg19 NA DN915906 Out-of-frame Intra-chr q23.2 q23.2 119189 ChimerSeq ChiTaRs ChiTaRs CCDC88C-MXRA7 CCDC88C chr14 91810001 MXRA7 chr17 74676230 Exonic hg19 NA BG191222 CDS-3'UTR Inter-chr q32.12 q25.1 119190 ChimerSeq ChiTaRs ChiTaRs DDX42-CADM3 DDX42 chr17 61895212 CADM3 chr1 159172901 Exonic hg19 NA AK125169 Out-of-frame Inter-chr q23.3 q23.2 Tumor suppressor gene 119191 ChimerSeq ChiTaRs ChiTaRs FGFR1OP2-SMARCA2 FGFR1OP2 chr12 27091643 SMARCA2 chr9 2181571 Exonic hg19 NA BM921978 5'UTR-CDS Inter-chr p11.23 p24.3 Tumor suppressor gene 119192 ChimerSeq ChiTaRs ChiTaRs C15orf57-SFTPC C15orf57 chr15 40824415 SFTPC chr8 22021513 Exonic hg19 NA BG529836 Out-of-frame Inter-chr q15.1 p21.3 119193 ChimerSeq ChiTaRs ChiTaRs CSH1-FBXW2 CSH1 chr17 61972519 FBXW2 chr9 123521496 Exonic hg19 NA BG623872 Out-of-frame Inter-chr q23.3 q33.2 119194 ChimerSeq ChiTaRs ChiTaRs EIF4A1-HSPA2 EIF4A1 chr17 7482031 HSPA2 chr14 65009163 Exonic hg19 NA AI371755 Out-of-frame Inter-chr p13.1 q23.3 119195 ChimerSeq ChiTaRs ChiTaRs GPI-NFKB2 GPI chr19 34856155 NFKB2 chr10 104154272 Exonic hg19 NA DB005136 Out-of-frame Inter-chr q24.32 Oncogene Transcription factor 119196 ChimerSeq ChiTaRs ChiTaRs DDX5-FAM127A DDX5 chr17 62499468 FAM127A chrX 134167118 Exonic hg19 NA W75994 Out-of-frame Inter-chr q23.3 119197 ChimerSeq ChiTaRs ChiTaRs SNRNP70-IFNAR1 SNRNP70 chr19 49589742 IFNAR1 chr21 34730210 Exonic hg19 NA DA571100 Out-of-frame Inter-chr q13.33 q22.11 119198 ChimerSeq ChiTaRs ChiTaRs SIDT2-C9orf96 SIDT2 chr11 117067339 C9orf96 chr9 136271186 Exonic hg19 NA BM874498 Out-of-frame Inter-chr q23.3 119199 ChimerSeq ChiTaRs ChiTaRs PMEPA1-ATF6 PMEPA1 chr20 56224009 ATF6 chr1 161818726 Exonic hg19 NA BQ420673 Out-of-frame Inter-chr q13.31 q23.3 Transcription factor 119200 ChimerSeq ChiTaRs ChiTaRs ELF1-CCT2 ELF1 chr13 41524088 CCT2 chr12 69993649 Exonic hg19 NA BG180662 Out-of-frame Inter-chr q14.11 Transcription factor q15 119201 ChimerSeq ChiTaRs ChiTaRs APLP2-EIF4G2 APLP2 chr11 129980491 EIF4G2 chr11 10822545 Exonic hg19 NA DC337896 Out-of-frame Intra-chr q24.3 p15.4 119202 ChimerSeq ChiTaRs ChiTaRs LOC100499466-SRSF4 LOC100499466 chr17 66097958 SRSF4 chr1 29481211 Exonic hg19 NA BX345476 Out-of-frame Inter-chr p35.3 119203 ChimerSeq ChiTaRs ChiTaRs CIB1-SPCS1 CIB1 chr15 90773698 SPCS1 chr3 52740153 Exonic hg19 NA BI335113 Out-of-frame Inter-chr q26.1 p21.1 119204 ChimerSeq ChiTaRs ChiTaRs CYB561-HTT CYB561 chr17 61509881 HTT chr4 3134291 Exonic hg19 NA BM678345 Out-of-frame Inter-chr q23.3 p16.3 119205 ChimerSeq ChiTaRs ChiTaRs ERAL1-TMEM131 ERAL1 chr17 27185727 TMEM131 chr2 98373752 Exonic hg19 NA BQ340945 Out-of-frame Inter-chr q11.2 q11.2 119206 ChimerSeq ChiTaRs ChiTaRs TPM4-TBL1XR1 TPM4 chr19 16212249 TBL1XR1 chr3 176807601 Exonic hg19 NA BF083294 Out-of-frame Inter-chr p13.12 q26.32 119207 ChimerSeq ChiTaRs ChiTaRs ARGLU1-NACA ARGLU1 chr13 107219971 NACA chr12 57106572 Exonic hg19 NA BE935101 Out-of-frame Inter-chr q33.3 q13.3 119208 ChimerSeq ChiTaRs ChiTaRs DGCR2-LAMB3 DGCR2 chr22 19024917 LAMB3 chr1 209789793 Exonic hg19 NA BI063077 Out-of-frame Inter-chr q11.21 q32.2 119209 ChimerSeq ChiTaRs ChiTaRs GAPDH-UBQLN4 GAPDH chr12 6646484 UBQLN4 chr1 156005092 Exonic hg19 NA CD387579 Out-of-frame Inter-chr p13.31 q22 119210 ChimerSeq ChiTaRs ChiTaRs NPIPA1-APOL3 NPIPA1 chr16 16444445 APOL3 chr22 36536806 Exonic hg19 NA AI355669 Out-of-frame Inter-chr q12.3 119211 ChimerSeq ChiTaRs ChiTaRs KRT19-SPINT1 KRT19 chr17 39680057 SPINT1 chr15 41145320 Exonic hg19 NA AI659242 Out-of-frame Inter-chr q21.2 Tumor suppressor gene q15.1 119212 ChimerSeq ChiTaRs ChiTaRs SERPINB5-MAPK1 SERPINB5 chr18 61151805 MAPK1 chr22 22116321 Exonic hg19 NA DA766661 Out-of-frame Inter-chr q21.33 Tumor suppressor gene q11.22 Oncogene 119213 ChimerSeq ChiTaRs ChiTaRs EIF5A-HSF1 EIF5A chr17 7215401 HSF1 chr8 145538241 Exonic hg19 NA AW954202 Out-of-frame Inter-chr p13.1 q24.3 Transcription factor 119214 ChimerSeq ChiTaRs ChiTaRs ARHGAP9-MARS ARHGAP9 chr12 57883307 MARS chr12 57883303 Exonic hg19 NA AW409902 Out-of-frame Intra-chr q13.3 q13.3 119215 ChimerSeq ChiTaRs ChiTaRs EFCAB6-TRAF3IP2-AS1 EFCAB6 chr22 44041744 TRAF3IP2-AS1 chr6 111912988 Exonic hg19 NA BQ677008 Out-of-frame Inter-chr q13.31 q21 119216 ChimerSeq ChiTaRs ChiTaRs CTNS-RPSA CTNS chr17 3566814 RPSA chr3 39448225 Exonic hg19 NA BU526731 Out-of-frame Inter-chr p13.2 p22.1 119217 ChimerSeq ChiTaRs ChiTaRs ARRDC2-FBXO32 ARRDC2 chr19 18120621 FBXO32 chr8 124553259 Exonic hg19 NA AI083499 Out-of-frame Inter-chr p13.11 q24.13 Tumor suppressor gene 119218 ChimerSeq ChiTaRs ChiTaRs FTL-TIMP2 FTL chr19 49470094 TIMP2 chr17 76851624 Exonic hg19 NA BU537701 Out-of-frame Inter-chr q13.33 q25.3 119219 ChimerSeq ChiTaRs ChiTaRs BOLA2-FADS2 BOLA2 chr16 30004581 FADS2 chr11 61630754 Exonic hg19 NA BU623713 Out-of-frame Inter-chr p11.2 q12.2 119220 ChimerSeq ChiTaRs ChiTaRs DNAL1-DNAL1 DNAL1 chr14 74166756 DNAL1 chr14 74165423 Exonic hg19 NA AA916835 Out-of-frame Intra-chr q24.3 q24.3 119221 ChimerSeq ChiTaRs ChiTaRs NPIPA1-EHD2 NPIPA1 chr16 18433810 EHD2 chr19 48220037 Exonic hg19 NA BI055814 Out-of-frame Inter-chr q13.33 119222 ChimerSeq ChiTaRs ChiTaRs MRC2-RNF20 MRC2 chr17 60770958 RNF20 chr9 104314090 Exonic hg19 NA BU632292 Out-of-frame Inter-chr q23.2 q31.1 119223 ChimerSeq ChiTaRs ChiTaRs GAPDH-PEA15 GAPDH chr12 6647444 PEA15 chr1 160184354 Exonic hg19 NA BG574895 Out-of-frame Inter-chr p13.31 q23.2 Tumor suppressor gene 119224 ChimerSeq ChiTaRs ChiTaRs ANKRD52-HIGD2A ANKRD52 chr12 56638912 HIGD2A chr5 175816714 Exonic hg19 NA BC024309 Out-of-frame Inter-chr q13.3 q35.2 119225 ChimerSeq ChiTaRs ChiTaRs GOLGA3-AVL9 GOLGA3 chr12 133402554 AVL9 chr7 32907786 Exonic hg19 NA BU958312 Out-of-frame Inter-chr q24.33 p14.3 119226 ChimerSeq ChiTaRs ChiTaRs GTF3C1-GH1 GTF3C1 chr16 27476782 GH1 chr17 61994560 Exonic hg19 NA AV748383 Out-of-frame Inter-chr p12.1 q23.3 119227 ChimerSeq ChiTaRs ChiTaRs DDIT3-ATF2 DDIT3 chr12 57914294 ATF2 chr2 175979448 Exonic hg19 NA BU662818 Out-of-frame Inter-chr q13.3 Oncogene Transcription factor q31.1 Transcription factor 119228 ChimerSeq ChiTaRs ChiTaRs ZFPM1-KLF6 ZFPM1 chr16 88580928 KLF6 chr10 3823839 Exonic hg19 NA CT004488 In-Frame Inter-chr q24.2 Transcription factor p15.2 Oncogene Tumor suppressor gene Transcription factor 119229 ChimerSeq ChiTaRs ChiTaRs HNRNPM-ZNF142 HNRNPM chr19 8520423 ZNF142 chr2 219516552 Exonic hg19 NA AU133680 Out-of-frame Inter-chr p13.2 q35 Transcription factor 119230 ChimerSeq ChiTaRs ChiTaRs KTN1-DOCK2 KTN1 chr14 56125316 DOCK2 chr5 169340141 Exonic hg19 NA AU186125 Out-of-frame Inter-chr q22.3 q35.1 119231 ChimerSeq ChiTaRs ChiTaRs SEC23A-NUP107 SEC23A chr14 39560358 NUP107 chr12 69083941 Exonic hg19 NA AI445956 Out-of-frame Inter-chr q21.1 q15 119232 ChimerSeq ChiTaRs ChiTaRs EXOC7-NAP1L1 EXOC7 chr17 74079088 NAP1L1 chr12 76447553 Exonic hg19 NA BF804803 Out-of-frame Inter-chr q25.1 q21.2 119233 ChimerSeq ChiTaRs ChiTaRs RAP1GAP2-TGOLN2 RAP1GAP2 chr17 2941035 TGOLN2 chr2 85554486 Exonic hg19 NA BF000533 3'UTR-CDS Inter-chr p13.3 p11.2 119234 ChimerSeq ChiTaRs ChiTaRs KIF1C-VCL KIF1C chr17 4927998 VCL chr10 75878269 Exonic hg19 NA AI129035 Out-of-frame Inter-chr p13.2 q22.2 119235 ChimerSeq ChiTaRs ChiTaRs IGFBP4-INS-IGF2 IGFBP4 chr17 38613149 INS-IGF2 chr11 2153218 Exonic hg19 NA BI051493 Out-of-frame Inter-chr q21.2 Tumor suppressor gene p15.5 119236 ChimerSeq ChiTaRs ChiTaRs MALAT1-LRP1B MALAT1 chr11 65269639 LRP1B chr2 142712019 Exonic hg19 NA BE179476 Out-of-frame Inter-chr q13.1 q22.2 Oncogene Tumor suppressor gene 119237 ChimerSeq ChiTaRs ChiTaRs MALAT1-MNT MALAT1 chr11 65266731 MNT chr17 2291299 Exonic hg19 NA CN412353 Out-of-frame Inter-chr q13.1 p13.3 Tumor suppressor gene Transcription factor 119238 ChimerSeq ChiTaRs ChiTaRs MAGOHB-TAGLN2 MAGOHB chr12 10760537 TAGLN2 chr1 159887921 Exonic hg19 NA BU536483 Out-of-frame Inter-chr p13.2 q23.2 119239 ChimerSeq ChiTaRs ChiTaRs SAFB2-DDX17 SAFB2 chr19 5587207 DDX17 chr22 38886701 Exonic hg19 NA BQ015306 Out-of-frame Inter-chr p13.3 Tumor suppressor gene Transcription factor q13.1 119240 ChimerSeq ChiTaRs ChiTaRs NUAK1-MTHFR NUAK1 chr12 106459196 MTHFR chr1 11858785 Exonic hg19 NA R09898 Out-of-frame Inter-chr q23.3 Tumor suppressor gene p36.22 119241 ChimerSeq ChiTaRs ChiTaRs RELA-C16orf45 RELA chr11 65425936 C16orf45 chr16 15681397 Exonic hg19 NA BG997651 Out-of-frame Inter-chr q13.1 Transcription factor 119242 ChimerSeq ChiTaRs ChiTaRs ABHD2-ABHD2 ABHD2 chr15 89744320 ABHD2 chr15 89743770 Exonic hg19 NA BQ027678 Out-of-frame Intra-chr q26.1 q26.1 119243 ChimerSeq ChiTaRs ChiTaRs SAMD4B-KIAA1841 SAMD4B chr19 39860755 KIAA1841 chr2 61342920 Exonic hg19 NA AK075484 Out-of-frame Inter-chr q13.2 p15 119244 ChimerSeq ChiTaRs ChiTaRs N4BP2L2-N4BP2L2 N4BP2L2 chr13 33092093 N4BP2L2 chr13 33091994 Exonic hg19 NA BG982035 Out-of-frame Intra-chr q13.1 q13.1 119245 ChimerSeq ChiTaRs ChiTaRs SLC25A3-LBR SLC25A3 chr12 98995188 LBR chr1 225589585 Exonic hg19 NA AI630623 Out-of-frame Inter-chr q23.1 q42.12 119246 ChimerSeq ChiTaRs ChiTaRs MALAT1-MEG3 MALAT1 chr11 65267927 MEG3 chr14 101297645 Exonic hg19 NA AV704581 Out-of-frame Inter-chr q13.1 q32.2 Tumor suppressor gene 119247 ChimerSeq ChiTaRs ChiTaRs TRAPPC1-LOC100507412 TRAPPC1 chr17 7835264 LOC100507412 chr? 109203 Exonic hg19 NA BP320798 Out-of-frame Inter-chr p13.1 119248 ChimerSeq ChiTaRs ChiTaRs EP300-SPPL3 EP300 chr22 41523721 SPPL3 chr12 121211275 Exonic hg19 NA DA384171 Out-of-frame Inter-chr q13.2 Oncogene q24.31 119249 ChimerSeq ChiTaRs ChiTaRs SRSF5-SLITRK2 SRSF5 chr14 70234945 SLITRK2 chrX 144903210 Exonic hg19 NA DA497174 Out-of-frame Inter-chr q24.1 q27.3 119250 ChimerSeq ChiTaRs ChiTaRs TM9SF4-ARPC1B TM9SF4 chr20 30753362 ARPC1B chr7 98987576 Exonic hg19 NA BM797540 Out-of-frame Inter-chr q11.21 q22.1 119251 ChimerSeq ChiTaRs ChiTaRs GCN1L1-GPR98 GCN1L1 chr12 120589034 GPR98 chr5 90459650 Exonic hg19 NA AV703126 Out-of-frame Inter-chr 119252 ChimerSeq ChiTaRs ChiTaRs SHANK3-SH2D4A SHANK3 chr22 51171640 SH2D4A chr8 19252561 Exonic hg19 NA AW196447 3'UTR-3'UTR Inter-chr p21.3 119253 ChimerSeq ChiTaRs ChiTaRs EXD2-FAM162A EXD2 chr14 69676499 FAM162A chr3 122128725 Exonic hg19 NA BU565473 Out-of-frame Inter-chr q24.1 q21.1 119254 ChimerSeq ChiTaRs ChiTaRs BOLA2-HADHB BOLA2 chr16 29831656 HADHB chr2 26486245 Exonic hg19 NA DA426922 Out-of-frame Inter-chr p11.2 p23.3 119255 ChimerSeq ChiTaRs ChiTaRs RTN1-DPYSL2 RTN1 chr14 60067808 DPYSL2 chr8 26514351 Exonic hg19 NA AK054747 Out-of-frame Inter-chr q23.1 p21.2 119256 ChimerSeq ChiTaRs ChiTaRs UQCRC2-LGALS1 UQCRC2 chr16 21976796 LGALS1 chr22 38075636 Exonic hg19 NA AA425586 Out-of-frame Inter-chr q13.1 119257 ChimerSeq ChiTaRs ChiTaRs PRNP-NUMBL PRNP chr20 4679973 NUMBL chr19 41175822 Exonic hg19 NA DB257971 Out-of-frame Inter-chr p13 q13.2 119258 ChimerSeq ChiTaRs ChiTaRs MUC16-DNAJC22 MUC16 chr19 9056241 DNAJC22 chr12 49742766 Exonic hg19 NA AK023298 Out-of-frame Inter-chr p13.2 q13.12 119259 ChimerSeq ChiTaRs ChiTaRs TMED2-PARM1 TMED2 chr12 124069276 PARM1 chr4 75858327 Exonic hg19 NA DA857875 Out-of-frame Inter-chr q24.31 q13.3 119260 ChimerSeq ChiTaRs ChiTaRs SLC39A9-MFF SLC39A9 chr14 69865776 MFF chr2 228190007 Exonic hg19 NA BC003191 Out-of-frame Inter-chr q24.1 q36.3 119261 ChimerSeq ChiTaRs ChiTaRs VAPA-SEC11A VAPA chr18 9954428 SEC11A chr15 85223946 Exonic hg19 NA BF094407 Out-of-frame Inter-chr p11.22 q25.3 119262 ChimerSeq ChiTaRs ChiTaRs RPL4-OGFOD2 RPL4 chr15 66797157 OGFOD2 chr12 123462872 Exonic hg19 NA BG910912 Out-of-frame Inter-chr q22.31 q24.31 119263 ChimerSeq ChiTaRs ChiTaRs TSPAN3-FLRT2 TSPAN3 chr15 77363451 FLRT2 chr14 86093150 Exonic hg19 NA AK095520 Out-of-frame Inter-chr q24.3 q31.3 119264 ChimerSeq ChiTaRs ChiTaRs RTN2-SPTBN1 RTN2 chr19 45988932 SPTBN1 chr2 54859751 Exonic hg19 NA M78718 Out-of-frame Inter-chr q13.32 p16.2 Tumor suppressor gene 119265 ChimerSeq ChiTaRs ChiTaRs LRRC37BP1-AGK LRRC37BP1 chr17 28975474 AGK chr7 141301004 Exonic hg19 NA BM547306 3'UTR-CDS Inter-chr q11.2 119266 ChimerSeq ChiTaRs ChiTaRs KIF21A-CADPS KIF21A chr12 39836914 CADPS chr3 62518700 Exonic hg19 NA DA344896 Out-of-frame Inter-chr q12 p14.2 119267 ChimerSeq ChiTaRs ChiTaRs EIF3CL-SETD3 EIF3CL chr16 28400000 SETD3 chr14 99864094 Exonic hg19 NA BC073965 Out-of-frame Inter-chr p12.1 q32.2 119268 ChimerSeq ChiTaRs ChiTaRs NOL4-TOX4 NOL4 chr18 31709908 TOX4 chr14 21945365 Exonic hg19 NA DA245368 Out-of-frame Inter-chr q12.1 q11.2 119269 ChimerSeq ChiTaRs ChiTaRs UBE2G2-TNFRSF1A UBE2G2 chr21 46190130 TNFRSF1A chr12 6442257 Exonic hg19 NA AU124156 Out-of-frame Inter-chr q22.3 p13.31 119270 ChimerSeq ChiTaRs ChiTaRs SPTBN2-KCTD5 SPTBN2 chr11 66456213 KCTD5 chr16 2758764 Exonic hg19 NA BM714711 Out-of-frame Inter-chr q13.2 p13.3 119271 ChimerSeq ChiTaRs ChiTaRs LOXHD1-S100A6 LOXHD1 chr18 44201991 S100A6 chr1 153507133 Exonic hg19 NA BQ327794 Out-of-frame Inter-chr q21.1 q21.3 119272 ChimerSeq ChiTaRs ChiTaRs EEA1-WDR61 EEA1 chr12 93172988 WDR61 chr15 78582784 Exonic hg19 NA BF817903 Out-of-frame Inter-chr q22 Transcription factor q25.1 119273 ChimerSeq ChiTaRs ChiTaRs ITGB4-USP37 ITGB4 chr17 73750805 USP37 chr2 219432696 Exonic hg19 NA BF871219 Out-of-frame Inter-chr q25.1 q35 119274 ChimerSeq ChiTaRs ChiTaRs TXNRD1-LCN2 TXNRD1 chr12 104659513 LCN2 chr9 130911776 Exonic hg19 NA BF801920 Out-of-frame Inter-chr q23.3 q34.11 119275 ChimerSeq ChiTaRs ChiTaRs ACSF2-ANAPC16 ACSF2 chr17 48542799 ANAPC16 chr10 73770877 Exonic hg19 NA BQ183620 Out-of-frame Inter-chr q21.33 q22.1 119276 ChimerSeq ChiTaRs ChiTaRs CD320-CHD1L CD320 chr19 8367399 CHD1L chr1 146758146 Exonic hg19 NA BG253724 Out-of-frame Inter-chr p13.2 q21.1 119277 ChimerSeq ChiTaRs ChiTaRs POLR2I-LAMP2 POLR2I chr19 36606123 LAMP2 chrX 119589342 Exonic hg19 NA DA230064 Out-of-frame Inter-chr q13.12 q24 119278 ChimerSeq ChiTaRs ChiTaRs ZNF626-PHLPP1 ZNF626 chr19 20844393 PHLPP1 chr18 60562243 Exonic hg19 NA DA250269 5'UTR-CDS Inter-chr p12 Transcription factor q21.33 Tumor suppressor gene 119279 ChimerSeq ChiTaRs ChiTaRs TOB1-CHMP4B TOB1 chr17 48943662 CHMP4B chr20 32441921 Exonic hg19 NA AA010026 Out-of-frame Inter-chr q21.33 q11.22 119280 ChimerSeq ChiTaRs ChiTaRs HECTD1-HCFC1R1 HECTD1 chr14 31578873 HCFC1R1 chr16 3072933 Exonic hg19 NA BM840300 Out-of-frame Inter-chr q12 p13.3 119281 ChimerSeq ChiTaRs ChiTaRs MAP1A-SPHK2 MAP1A chr15 43815229 SPHK2 chr19 49133508 Exonic hg19 NA C02583 Out-of-frame Inter-chr q15.3 q13.33 119282 ChimerSeq ChiTaRs ChiTaRs LGALS1-MTHFD2L LGALS1 chr22 38075809 MTHFD2L chr4 75023137 Exonic hg19 NA BU155734 3'UTR-5'UTR Inter-chr q13.1 q13.3 119283 ChimerSeq ChiTaRs ChiTaRs ONECUT1-ITIH4 ONECUT1 chr15 53082210 ITIH4 chr3 52847302 Exonic hg19 NA D38535 Out-of-frame Inter-chr q21.3 Tumor suppressor gene Transcription factor p21.1 119284 ChimerSeq ChiTaRs ChiTaRs OS9-SPRYD3 OS9 chr12 58114219 SPRYD3 chr12 53458643 Exonic hg19 NA AA296951 Out-of-frame Intra-chr q13.3 q13.13 119285 ChimerSeq ChiTaRs ChiTaRs SHCBP1-IGJ SHCBP1 chr16 46655288 IGJ chr4 71521262 Exonic hg19 NA BC020889 Out-of-frame Inter-chr q11.2 119286 ChimerSeq ChiTaRs ChiTaRs SCYL1-COL1A1 SCYL1 chr11 65300218 COL1A1 chr17 48267387 Exonic hg19 NA CV337912 Out-of-frame Inter-chr q13.1 Other:SCY1 Tumor suppressor gene q21.33 Oncogene 119287 ChimerSeq ChiTaRs ChiTaRs TPPP3-ANKRD30A TPPP3 chr16 67424931 ANKRD30A chr10 37436663 Exonic hg19 NA BF995465 Out-of-frame Inter-chr q22.1 p11.21 119288 ChimerSeq ChiTaRs ChiTaRs CIAPIN1-PDHA2 CIAPIN1 chr16 57462595 PDHA2 chr4 96761617 Exonic hg19 NA AI393336 Out-of-frame Inter-chr q21 q22.3 119289 ChimerSeq ChiTaRs ChiTaRs ZBTB25-CCDC41 ZBTB25 chr14 64970322 CCDC41 chr12 94818534 Exonic hg19 NA DB264069 Out-of-frame Inter-chr q23.3 Transcription factor 119290 ChimerSeq ChiTaRs ChiTaRs PRKACA-ENTPD1 PRKACA chr19 14228556 ENTPD1 chr10 97627439 Exonic hg19 NA DR006627 Out-of-frame Inter-chr p13.12 q24.1 119291 ChimerSeq ChiTaRs ChiTaRs HCST-IMMT HCST chr19 36394762 IMMT chr2 86393635 Exonic hg19 NA BM925115 Out-of-frame Inter-chr q13.12 p11.2 119292 ChimerSeq ChiTaRs ChiTaRs MAPK1-ATP1A1 MAPK1 chr22 22115742 ATP1A1 chr1 116941300 Exonic hg19 NA BG877408 Out-of-frame Inter-chr q11.22 Oncogene p13.1 119293 ChimerSeq ChiTaRs ChiTaRs HIRA-FSTL1 HIRA chr22 19422311 FSTL1 chr3 120113496 Exonic hg19 NA CF130902 Out-of-frame Inter-chr q11.21 Tumor suppressor gene q13.33 119294 ChimerSeq ChiTaRs ChiTaRs IKZF3-RPL12 IKZF3 chr17 37921511 RPL12 chr9 130209966 Exonic hg19 NA BF089907 Out-of-frame Inter-chr q21.1 Tumor suppressor gene Transcription factor q33.3 119295 ChimerSeq ChiTaRs ChiTaRs TPI1-MAPK14 TPI1 chr12 6979992 MAPK14 chr6 36076697 Exonic hg19 NA AI652202 Out-of-frame Inter-chr p13.31 p21.31 119296 ChimerSeq ChiTaRs ChiTaRs TMBIM6-NOTCH2 TMBIM6 chr12 50146794 NOTCH2 chr1 120510073 Exonic hg19 NA BX505457 Out-of-frame Inter-chr q13.12 p12 Oncogene Tumor suppressor gene 119297 ChimerSeq ChiTaRs ChiTaRs AGPAT3-ATP1A4 AGPAT3 chr21 45366941 ATP1A4 chr1 160136317 Exonic hg19 NA AK125812 5'UTR-CDS Inter-chr q22.3 q23.2 119298 ChimerSeq ChiTaRs ChiTaRs BCL2L12-LENG8 BCL2L12 chr19 50177170 LENG8 chr19 54969396 Exonic hg19 NA AI950048 Out-of-frame Intra-chr q13.33 119299 ChimerSeq ChiTaRs ChiTaRs TYK2-SHISA4 TYK2 chr19 10464794 SHISA4 chr1 201861352 Exonic hg19 NA AW836330 Out-of-frame Inter-chr p13.2 TK:JakA q32.1 119300 ChimerSeq ChiTaRs ChiTaRs NCR1-FBXO18 NCR1 chr19 55421430 FBXO18 chr10 5944982 Exonic hg19 NA AK309053 CDS-5'UTR Inter-chr p15.1 119301 ChimerSeq ChiTaRs ChiTaRs TAF1D-TRPC4AP TAF1D chr11 93474658 TRPC4AP chr20 33598035 Exonic hg19 NA DA177489 Out-of-frame Inter-chr q21 q11.22 119302 ChimerSeq ChiTaRs ChiTaRs SLC12A6-TES SLC12A6 chr15 34524933 TES chr7 115898429 Exonic hg19 NA AA036910 Out-of-frame Inter-chr q14 q31.2 Tumor suppressor gene 119303 ChimerSeq ChiTaRs ChiTaRs FLOT2-FURIN FLOT2 chr17 27207203 FURIN chr15 91424801 Exonic hg19 NA CK822851 Out-of-frame Inter-chr q11.2 q26.1 119304 ChimerSeq ChiTaRs ChiTaRs LOC647946-DNTTIP2 LOC647946 chr18 36914928 DNTTIP2 chr1 94343130 Exonic hg19 NA DA599079 Out-of-frame Inter-chr p22.1 119305 ChimerSeq ChiTaRs ChiTaRs UTP18-HSPA8 UTP18 chr17 49340686 HSPA8 chr11 122930290 Exonic hg19 NA BP357681 Out-of-frame Inter-chr q21.33 q24.1 119306 ChimerSeq ChiTaRs ChiTaRs RAB36-TMSB10 RAB36 chr22 23505803 TMSB10 chr2 85133699 Exonic hg19 NA BC017436 Out-of-frame Inter-chr q11.23 p11.2 119307 ChimerSeq ChiTaRs ChiTaRs ANXA2-EZR ANXA2 chr15 60654431 EZR chr6 159188506 Exonic hg19 NA AW444560 Out-of-frame Inter-chr q22.2 q25.3 119308 ChimerSeq ChiTaRs ChiTaRs RPL18-NDC80 RPL18 chr19 49118684 NDC80 chr18 2589255 Exonic hg19 NA BQ776047 Out-of-frame Inter-chr q13.33 p11.32 119309 ChimerSeq ChiTaRs ChiTaRs MALAT1-PLEKHB1 MALAT1 chr11 65272578 PLEKHB1 chr11 73359991 Exonic hg19 NA DC328276 Out-of-frame Intra-chr q13.1 q13.4 119310 ChimerSeq ChiTaRs ChiTaRs EED-SRSF4 EED chr11 85955994 SRSF4 chr1 29485898 Exonic hg19 NA DA789139 Out-of-frame Inter-chr q14.2 Tumor suppressor gene p35.3 119311 ChimerSeq ChiTaRs ChiTaRs SLC15A4-HERC2 SLC15A4 chr12 129303084 HERC2 chr15 28389248 Exonic hg19 NA BF922900 Out-of-frame Inter-chr q24.33 119312 ChimerSeq ChiTaRs ChiTaRs SH3BP1-NDUFAF3 SH3BP1 chr22 38035742 NDUFAF3 chr3 49059939 Exonic hg19 NA BM549339 Out-of-frame Inter-chr q13.1 p21.31 119313 ChimerSeq ChiTaRs ChiTaRs KIAA1737-CPM KIAA1737 chr14 77581543 CPM chr12 69248210 Exonic hg19 NA CV573884 Out-of-frame Inter-chr q15 119314 ChimerSeq ChiTaRs ChiTaRs SDC4-BIN1 SDC4 chr20 43955290 BIN1 chr2 127805626 Exonic hg19 NA CB136042 Out-of-frame Inter-chr q13.12 q14.3 Tumor suppressor gene 119315 ChimerSeq ChiTaRs ChiTaRs PRPF40B-MIDN PRPF40B chr12 50028332 MIDN chr19 1257524 Exonic hg19 NA AA343865 Out-of-frame Inter-chr q13.12 p13.3 119316 ChimerSeq ChiTaRs ChiTaRs COX7A1-TOP2B COX7A1 chr19 36643349 TOP2B chr3 25639484 Exonic hg19 NA CB858076 Out-of-frame Inter-chr q13.12 p24.2 119317 ChimerSeq ChiTaRs ChiTaRs DCN-ZNF263 DCN chr12 91572364 ZNF263 chr16 3341286 Exonic hg19 NA BM720639 Out-of-frame Inter-chr q21.33 Tumor suppressor gene p13.3 Transcription factor 119318 ChimerSeq ChiTaRs ChiTaRs BCL11B-TRA@ BCL11B chr14 99697850 TRA@ chr14 22918930 Exonic hg19 NA AY752978 Out-of-frame Intra-chr q32.2 Oncogene Transcription factor q11.2 119319 ChimerSeq ChiTaRs ChiTaRs DLGAP4-ZNF668 DLGAP4 chr20 35125171 ZNF668 chr16 31072878 Exonic hg19 NA DA524473 Out-of-frame Inter-chr q11.23 p11.2 Tumor suppressor gene Transcription factor 119320 ChimerSeq ChiTaRs ChiTaRs SUPT16H-EMP2 SUPT16H chr14 21822697 EMP2 chr16 10623269 Exonic hg19 NA BF088410 Out-of-frame Inter-chr q11.2 p13.13 Tumor suppressor gene 119321 ChimerSeq ChiTaRs ChiTaRs RNF213-TPP1 RNF213 chr17 78367289 TPP1 chr11 6635336 Exonic hg19 NA BI024546 Out-of-frame Inter-chr q25.3 Oncogene p15.4 119322 ChimerSeq ChiTaRs ChiTaRs PHKB-LOC100093631 PHKB chr16 47734000 LOC100093631 chr7 74802761 Exonic hg19 NA BP243202 Out-of-frame Inter-chr q12.1 119323 ChimerSeq ChiTaRs ChiTaRs CHGA-HGSNAT CHGA chr14 93397747 HGSNAT chr8 43056078 Exonic hg19 NA W23477 Out-of-frame Inter-chr q32.12 p11.21 119324 ChimerSeq ChiTaRs ChiTaRs SUCLA2-C1orf86 SUCLA2 chr13 48516901 C1orf86 chr1 2120990 Exonic hg19 NA BP397513 Out-of-frame Inter-chr q14.2 119325 ChimerSeq ChiTaRs ChiTaRs C17orf76-AS1-ITGB3BP C17orf76-AS1 chr17 16342728 ITGB3BP chr1 63919340 Exonic hg19 NA BJ989891 Out-of-frame Inter-chr p31.3 Tumor suppressor gene 119326 ChimerSeq ChiTaRs ChiTaRs PVRL1-SNHG1 PVRL1 chr11 119547910 SNHG1 chr11 62619797 Exonic hg19 NA BF917457 Out-of-frame Intra-chr q12.3 119327 ChimerSeq ChiTaRs ChiTaRs MEF2BNB-MEF2B-MCM4 MEF2BNB-MEF2B chr19 19297815 MCM4 chr8 48889651 Exonic hg19 NA AW951612 Out-of-frame Inter-chr q11.21 Transcription factor 119328 ChimerSeq ChiTaRs ChiTaRs DAZAP1-MAD1L1 DAZAP1 chr19 1407802 MAD1L1 chr7 1855533 Exonic hg19 NA CD048646 Out-of-frame Inter-chr p13.3 p22.3 Tumor suppressor gene 119329 ChimerSeq ChiTaRs ChiTaRs NEMF-FN1 NEMF chr14 50269283 FN1 chr2 216292675 Exonic hg19 NA BC073981 Out-of-frame Inter-chr q21.3 q35 Oncogene 119330 ChimerSeq ChiTaRs ChiTaRs TUBA1C-RPS23 TUBA1C chr12 49663672 RPS23 chr5 81571883 Exonic hg19 NA BM785206 Out-of-frame Inter-chr q13.12 q14.2 119331 ChimerSeq ChiTaRs ChiTaRs PNPO-RNF141 PNPO chr17 46020728 RNF141 chr11 10534604 Exonic hg19 NA BQ218587 Out-of-frame Inter-chr q21.32 p15.4 119332 ChimerSeq ChiTaRs ChiTaRs AATF-BCLAF1 AATF chr17 35310426 BCLAF1 chr6 136599239 Exonic hg19 NA BE866034 Out-of-frame Inter-chr q23.3 119333 ChimerSeq ChiTaRs ChiTaRs PTTG1IP-GEMIN2 PTTG1IP chr21 46271071 GEMIN2 chr14 39591695 Exonic hg19 NA BF804049 Out-of-frame Inter-chr q22.3 q21.1 119334 ChimerSeq ChiTaRs ChiTaRs SLC39A9-MFF SLC39A9 chr14 69865776 MFF chr2 228190008 Exonic hg19 NA BF315963 Out-of-frame Inter-chr q24.1 q36.3 119335 ChimerSeq ChiTaRs ChiTaRs BSG-SLC1A3 BSG chr19 580441 SLC1A3 chr5 36686310 Exonic hg19 NA DA210402 Out-of-frame Inter-chr p13.3 p13.2 119336 ChimerSeq ChiTaRs ChiTaRs MDGA2-CSTA MDGA2 chr14 47730706 CSTA chr3 122044117 Exonic hg19 NA BE840752 Out-of-frame Inter-chr q21.3 q21.1 119337 ChimerSeq ChiTaRs ChiTaRs GGA2-RPF1 GGA2 chr16 23505670 RPF1 chr1 84956001 Exonic hg19 NA AA766308 In-Frame Inter-chr p12.2 p22.3 Tumor suppressor gene 119338 ChimerSeq ChiTaRs ChiTaRs PPIB-SRSF3 PPIB chr15 64455186 SRSF3 chr6 36566658 Exonic hg19 NA BE958249 Out-of-frame Inter-chr q22.31 p21.31 119339 ChimerSeq ChiTaRs ChiTaRs PPP2R5C-ACAP2 PPP2R5C chr14 102368086 ACAP2 chr3 195155355 Exonic hg19 NA AW847260 Out-of-frame Inter-chr q32.31 Tumor suppressor gene q29 119340 ChimerSeq ChiTaRs ChiTaRs KHSRP-CRTAP KHSRP chr19 6424741 CRTAP chr3 33155645 Exonic hg19 NA BU902214 Out-of-frame Inter-chr p13.3 p22.3 119341 ChimerSeq ChiTaRs ChiTaRs ASCC2-LAMTOR3 ASCC2 chr22 30196563 LAMTOR3 chr4 100802650 Exonic hg19 NA AK093581 Out-of-frame Inter-chr q12.2 q23 119342 ChimerSeq ChiTaRs ChiTaRs ITM2B-MIR632 ITM2B chr13 48830412 MIR632 chr17 30677180 Exonic hg19 NA AU125620 Out-of-frame Inter-chr q14.2 q11.2 119343 ChimerSeq ChiTaRs ChiTaRs N4BP1-N4BP1 N4BP1 chr16 48595497 N4BP1 chr16 48595524 Exonic hg19 NA AA827624 Out-of-frame Intra-chr q12.1 q12.1 119344 ChimerSeq ChiTaRs ChiTaRs CARD8-RPA1 CARD8 chr19 48759150 RPA1 chr17 1746096 Exonic hg19 NA DA884322 5'UTR-CDS Inter-chr q13.33 p13.3 Tumor suppressor gene 119345 ChimerSeq ChiTaRs ChiTaRs AXL-LTBP1 AXL chr19 41767546 LTBP1 chr2 33623778 Exonic hg19 NA CR740035 Out-of-frame Inter-chr q13.2 TK:Axl Oncogene p22.3 119346 ChimerSeq ChiTaRs ChiTaRs C19orf6-NCL C19orf6 chr19 1013341 NCL chr2 232319671 Exonic hg19 NA BG954816 Out-of-frame Inter-chr q37.1 119347 ChimerSeq ChiTaRs ChiTaRs PHB2-BTN3A2 PHB2 chr12 7074772 BTN3A2 chr6 26368414 Exonic hg19 NA AA995792 Out-of-frame Inter-chr p13.31 p22.2 119348 ChimerSeq ChiTaRs ChiTaRs STX16-RNF208 STX16 chr20 57226462 RNF208 chr9 140114885 Exonic hg19 NA BQ944843 Out-of-frame Inter-chr q13.32 q34.3 119349 ChimerSeq ChiTaRs ChiTaRs MYL6-DST MYL6 chr12 56555359 DST chr6 56323908 Exonic hg19 NA AI952500 Out-of-frame Inter-chr q13.2 p12.1 Oncogene 119350 ChimerSeq ChiTaRs ChiTaRs TIMM13-BAIAP2 TIMM13 chr19 2427534 BAIAP2 chr17 79064989 Exonic hg19 NA CN308207 Out-of-frame Inter-chr p13.3 q25.3 119351 ChimerSeq ChiTaRs ChiTaRs TMC4-COQ5 TMC4 chr19 54664264 COQ5 chr12 120963771 Exonic hg19 NA BE830375 Out-of-frame Inter-chr q24.31 119352 ChimerSeq ChiTaRs ChiTaRs DTD1-FKBP3 DTD1 chr20 18744527 FKBP3 chr14 45585105 Exonic hg19 NA M90309 Out-of-frame Inter-chr p11.23 q21.2 119353 ChimerSeq ChiTaRs ChiTaRs DCN-CRIPAK DCN chr12 91572312 CRIPAK chr4 1387247 Exonic hg19 NA CV569111 Out-of-frame Inter-chr q21.33 Tumor suppressor gene p16.3 119354 ChimerSeq ChiTaRs ChiTaRs EXOC7-NAP1L1 EXOC7 chr17 74079112 NAP1L1 chr12 76447553 Exonic hg19 NA BF756411 Out-of-frame Inter-chr q25.1 q21.2 119355 ChimerSeq ChiTaRs ChiTaRs ZDHHC20-UBIAD1 ZDHHC20 chr13 22033347 UBIAD1 chr1 11346838 Exonic hg19 NA DA568045 Out-of-frame Inter-chr q12.11 p36.22 Tumor suppressor gene 119356 ChimerSeq ChiTaRs ChiTaRs SMG6-DSG2 SMG6 chr17 2113589 DSG2 chr18 29111160 Exonic hg19 NA BP223879 Out-of-frame Inter-chr p13.3 q12.1 119357 ChimerSeq ChiTaRs ChiTaRs TUBA1B-F8A3 TUBA1B chr12 49521880 F8A3 chrX 154686903 Exonic hg19 NA BE960893 Out-of-frame Inter-chr q13.12 q28 119358 ChimerSeq ChiTaRs ChiTaRs LASP1-EEF1A1 LASP1 chr17 37075167 EEF1A1 chr6 74227238 Exonic hg19 NA BC001412 Out-of-frame Inter-chr q12 q13 Tumor suppressor gene 119359 ChimerSeq ChiTaRs ChiTaRs TBCB-EIF4EBP2 TBCB chr19 36606557 EIF4EBP2 chr10 72164111 Exonic hg19 NA AL561402 Out-of-frame Inter-chr q13.12 q22.1 119360 ChimerSeq ChiTaRs ChiTaRs C17orf85-LRPAP1 C17orf85 chr17 3715747 LRPAP1 chr4 3514696 Exonic hg19 NA AI279861 Out-of-frame Inter-chr p16.3 119361 ChimerSeq ChiTaRs ChiTaRs TBCB-LOC728554 TBCB chr19 36616833 LOC728554 chr5 177311007 Exonic hg19 NA BP390379 Out-of-frame Inter-chr q13.12 119362 ChimerSeq ChiTaRs ChiTaRs CEP250-POLR2A CEP250 chr20 34095612 POLR2A chr17 7416611 Exonic hg19 NA BF805544 Out-of-frame Inter-chr q11.22 p13.1 119363 ChimerSeq ChiTaRs ChiTaRs AP1G1-ABCA6 AP1G1 chr16 71792385 ABCA6 chr17 67133438 Exonic hg19 NA BG538229 Out-of-frame Inter-chr q22.2 q24.3 119364 ChimerSeq ChiTaRs ChiTaRs C20orf27-ARID5B C20orf27 chr20 3734288 ARID5B chr10 63853988 Exonic hg19 NA BQ448040 Out-of-frame Inter-chr p13 q21.2 Transcription factor 119365 ChimerSeq ChiTaRs ChiTaRs MYO5A-PJA2 MYO5A chr15 52675388 PJA2 chr5 108674564 Exonic hg19 NA Z22957 Out-of-frame Inter-chr q21.2 q21.3 119366 ChimerSeq ChiTaRs ChiTaRs ZNF331-WDR37 ZNF331 chr19 54074984 WDR37 chr10 1125950 Exonic hg19 NA DB086777 In-Frame Inter-chr q13.42 Transcription factor p15.3 119367 ChimerSeq ChiTaRs ChiTaRs HSPA8-HSPD1 HSPA8 chr11 122930127 HSPD1 chr2 198361911 Exonic hg19 NA DB195849 Out-of-frame Inter-chr q24.1 q33.1 Tumor suppressor gene 119368 ChimerSeq ChiTaRs ChiTaRs RALY-JUP RALY chr20 32664865 JUP chr17 39845246 Exonic hg19 NA BG035867 Out-of-frame Inter-chr q11.22 q21.2 Tumor suppressor gene 119369 ChimerSeq ChiTaRs ChiTaRs MAFB-WDR48 MAFB chr20 39317876 WDR48 chr3 39133141 Exonic hg19 NA DA693159 5'UTR-CDS Inter-chr q12 Oncogene Transcription factor p22.2 Tumor suppressor gene 119370 ChimerSeq ChiTaRs ChiTaRs UQCRFS1-CEP350 UQCRFS1 chr19 29704049 CEP350 chr1 180082113 Exonic hg19 NA BM762485 Out-of-frame Inter-chr q12 q25.2 119371 ChimerSeq ChiTaRs ChiTaRs NUMB-HKR1 NUMB chr14 73925231 HKR1 chr19 37838092 Exonic hg19 NA DB209535 Out-of-frame Inter-chr q24.3 Tumor suppressor gene q13.12 Transcription factor 119372 ChimerSeq ChiTaRs ChiTaRs STAT6-SH3KBP1 STAT6 chr12 57489903 SH3KBP1 chrX 19553976 Exonic hg19 NA W02736 Out-of-frame Inter-chr q13.3 Transcription factor p22.12 119373 ChimerSeq ChiTaRs ChiTaRs RPL38-DONSON RPL38 chr17 72206008 DONSON chr21 35276247 Exonic hg19 NA BE797621 Out-of-frame Inter-chr q25.1 q22.11 119374 ChimerSeq ChiTaRs ChiTaRs HSP90AA1-NFRKB HSP90AA1 chr14 102549489 NFRKB chr11 129751622 Exonic hg19 NA AU143249 Out-of-frame Inter-chr q32.31 Oncogene q24.3 119375 ChimerSeq ChiTaRs ChiTaRs ATP5G2-HMGA1 ATP5G2 chr12 54059142 HMGA1 chr6 34213355 Exonic hg19 NA CD369703 Out-of-frame Inter-chr q13.13 p21.31 Transcription factor 119376 ChimerSeq ChiTaRs ChiTaRs LILRB4-IMPA2 LILRB4 chr19 55179681 IMPA2 chr18 12028110 Exonic hg19 NA AA593969 Out-of-frame Inter-chr p11.21 119377 ChimerSeq ChiTaRs ChiTaRs ICAM1-TMSB10 ICAM1 chr19 10397205 TMSB10 chr2 85133715 Exonic hg19 NA AA193647 Out-of-frame Inter-chr p13.2 p11.2 119378 ChimerSeq ChiTaRs ChiTaRs PRSS23-MGP PRSS23 chr11 86666212 MGP chr12 15034825 Exonic hg19 NA BC025750 Out-of-frame Inter-chr q14.2 p12.3 119379 ChimerSeq ChiTaRs ChiTaRs LINC00478-KLHL7 LINC00478 chr21 17443721 KLHL7 chr7 23191685 Exonic hg19 NA CB152085 5'UTR-5'UTR Inter-chr p15.3 119380 ChimerSeq ChiTaRs ChiTaRs MALAT1-TMBIM6 MALAT1 chr11 65269351 TMBIM6 chr12 50152241 Exonic hg19 NA BE079562 Out-of-frame Inter-chr q13.1 q13.12 119381 ChimerSeq ChiTaRs ChiTaRs RMI2-AGPS RMI2 chr16 11375187 AGPS chr2 178257504 Exonic hg19 NA DB074890 Out-of-frame Inter-chr p13.13 q31.2 119382 ChimerSeq ChiTaRs ChiTaRs NSRP1-UROD NSRP1 chr17 28503653 UROD chr1 45478873 Exonic hg19 NA BU157543 Out-of-frame Inter-chr q11.2 p34.1 119383 ChimerSeq ChiTaRs ChiTaRs ELL3-PSMC4 ELL3 chr15 44086239 PSMC4 chr19 40480336 Exonic hg19 NA BQ219974 Out-of-frame Inter-chr q15.3 119384 ChimerSeq ChiTaRs ChiTaRs PITPNA-ACTB PITPNA chr17 1451611 ACTB chr7 5567303 Exonic hg19 NA BQ321009 Out-of-frame Inter-chr p13.3 p22.1 119385 ChimerSeq ChiTaRs ChiTaRs CD248-NGFR CD248 chr11 66082056 NGFR chr17 47583890 Exonic hg19 NA AW204995 Out-of-frame Inter-chr q13.2 q21.33 Tumor suppressor gene 119386 ChimerSeq ChiTaRs ChiTaRs KDSR-CNN2 KDSR chr18 60996073 CNN2 chr19 1038784 Exonic hg19 NA AA258694 Out-of-frame Inter-chr q21.33 p13.3 119387 ChimerSeq ChiTaRs ChiTaRs PPDPF-MYO1D PPDPF chr20 62153517 MYO1D chr17 30820386 Exonic hg19 NA AA532861 Out-of-frame Inter-chr q13.33 q11.2 119388 ChimerSeq ChiTaRs ChiTaRs SNRPA-EIF3I SNRPA chr19 41265371 EIF3I chr1 32688010 Exonic hg19 NA AU123912 Out-of-frame Inter-chr q13.2 p35.2 119389 ChimerSeq ChiTaRs ChiTaRs MINK1-DAZAP2 MINK1 chr17 4801127 DAZAP2 chr12 51632677 Exonic hg19 NA AA325636 Out-of-frame Inter-chr p13.2 q13.13 119390 ChimerSeq ChiTaRs ChiTaRs C3-DOCK1 C3 chr19 6678445 DOCK1 chr10 128775001 Exonic hg19 NA AV684613 Out-of-frame Inter-chr p13.3 q26.2 119391 ChimerSeq ChiTaRs ChiTaRs KIAA0247-PPP2R5E KIAA0247 chr14 70078545 PPP2R5E chr14 63863327 Exonic hg19 NA AA280038 5'UTR-CDS Intra-chr q23.2 119392 ChimerSeq ChiTaRs ChiTaRs DDX55-ALDH3A1 DDX55 chr12 124101096 ALDH3A1 chr17 19643649 Exonic hg19 NA BQ331769 Out-of-frame Inter-chr q24.31 p11.2 119393 ChimerSeq ChiTaRs ChiTaRs KRT5-PACS1 KRT5 chr12 52914178 PACS1 chr11 66011346 Exonic hg19 NA BP327844 Out-of-frame Inter-chr q13.13 q13.1 119394 ChimerSeq ChiTaRs ChiTaRs KITLG-ODC1 KITLG chr12 88887893 ODC1 chr2 10580514 Exonic hg19 NA BG282567 Out-of-frame Inter-chr q21.32 p25.1 119395 ChimerSeq ChiTaRs ChiTaRs RPL23-JARID2 RPL23 chr17 37009360 JARID2 chr6 15498498 Exonic hg19 NA BG878350 Out-of-frame Inter-chr q12 p22.3 119396 ChimerSeq ChiTaRs ChiTaRs CPT1A-RDH5 CPT1A chr11 68607152 RDH5 chr12 56117668 Exonic hg19 NA AK309464 Out-of-frame Inter-chr q13.3 q13.2 119397 ChimerSeq ChiTaRs ChiTaRs FSTL3-SCARNA2 FSTL3 chr19 682370 SCARNA2 chr1 109642874 Exonic hg19 NA BG951490 Out-of-frame Inter-chr p13.3 p13.3 119398 ChimerSeq ChiTaRs ChiTaRs MMP2-ST7 MMP2 chr16 55540151 ST7 chr7 116598035 Exonic hg19 NA CA440623 Out-of-frame Inter-chr q12.2 Oncogene q31.2 Tumor suppressor gene 119399 ChimerSeq ChiTaRs ChiTaRs CELF4-FRS2 CELF4 chr18 34823794 FRS2 chr12 69972190 Exonic hg19 NA BI042138 Out-of-frame Inter-chr q12.2 q15 119400 ChimerSeq ChiTaRs ChiTaRs YWHAE-NUTM2A-AS1 YWHAE chr17 1303436 NUTM2A-AS1 chr10 88988019 Exonic hg19 NA JN999699 Out-of-frame Inter-chr p13.3 q23.2 119401 ChimerSeq ChiTaRs ChiTaRs ACTN4-DAB2 ACTN4 chr19 39212303 DAB2 chr5 39375115 Exonic hg19 NA BQ679209 CDS-3'UTR Inter-chr p13.1 Tumor suppressor gene 119402 ChimerSeq ChiTaRs ChiTaRs PAPOLA-COL6A2 PAPOLA chr14 96968884 COL6A2 chr21 47531894 Exonic hg19 NA CO406110 Out-of-frame Inter-chr q32.2 q22.3 119403 ChimerSeq ChiTaRs ChiTaRs G6PC-TXNL4B G6PC chr17 41063045 TXNL4B chr16 72094645 Exonic hg19 NA BC020700 Out-of-frame Inter-chr q21.31 q22.2 119404 ChimerSeq ChiTaRs ChiTaRs SF3A1-PEA15 SF3A1 chr22 30730670 PEA15 chr1 160183340 Exonic hg19 NA BU620654 Out-of-frame Inter-chr q12.2 q23.2 Tumor suppressor gene 119405 ChimerSeq ChiTaRs ChiTaRs ARL17A-GRHL1 ARL17A chr17 198201 GRHL1 chr2 10141544 Exonic hg19 NA BE144212 Out-of-frame Inter-chr q21.31 p25.1 Transcription factor 119406 ChimerSeq ChiTaRs ChiTaRs UBE2M-PKDCC UBE2M chr19 59067133 PKDCC chr2 42285246 Exonic hg19 NA BQ011009 Out-of-frame Inter-chr q13.43 p21 119407 ChimerSeq ChiTaRs ChiTaRs REXO2-SARM1 REXO2 chr11 114320999 SARM1 chr17 26714437 Exonic hg19 NA AA508759 Out-of-frame Inter-chr q23.2 q11.2 119408 ChimerSeq ChiTaRs ChiTaRs PHB2-SPINT1 PHB2 chr12 7079809 SPINT1 chr15 41148087 Exonic hg19 NA BE281028 Out-of-frame Inter-chr p13.31 q15.1 119409 ChimerSeq ChiTaRs ChiTaRs DTNA-RPRD1A DTNA chr18 32374215 RPRD1A chr18 33573146 Exonic hg19 NA DA409961 Out-of-frame Intra-chr q12.1 q12.2 119410 ChimerSeq ChiTaRs ChiTaRs SNRPN-RREB1 SNRPN chr15 25223436 RREB1 chr6 7108259 Exonic hg19 NA T19462 Out-of-frame Inter-chr q11.2 p24.3 Transcription factor 119411 ChimerSeq ChiTaRs ChiTaRs MRPL4-ECI1 MRPL4 chr19 10370405 ECI1 chr16 2301515 Exonic hg19 NA BE388423 In-Frame Inter-chr p13.2 p13.3 119412 ChimerSeq ChiTaRs ChiTaRs NAA60-FKBP3 NAA60 chr16 3529591 FKBP3 chr14 45585282 Exonic hg19 NA BQ213165 Out-of-frame Inter-chr p13.3 q21.2 119413 ChimerSeq ChiTaRs ChiTaRs RPL23-DFFA RPL23 chr17 37009974 DFFA chr1 10521426 Exonic hg19 NA AW594130 Out-of-frame Inter-chr q12 p36.22 Tumor suppressor gene 119414 ChimerSeq ChiTaRs ChiTaRs U2AF2-ZFP36L2 U2AF2 chr19 56170650 ZFP36L2 chr2 43451258 Exonic hg19 NA AI650588 Out-of-frame Inter-chr q13.42 p21 Tumor suppressor gene 119415 ChimerSeq ChiTaRs ChiTaRs TAPBPL-ACTN4 TAPBPL chr12 6572293 ACTN4 chr19 39220670 Exonic hg19 NA BG685833 Out-of-frame Inter-chr p13.31 119416 ChimerSeq ChiTaRs ChiTaRs GTSF1-TGOLN2 GTSF1 chr12 54856468 TGOLN2 chr2 85549255 Exonic hg19 NA BU620280 Out-of-frame Inter-chr q13.13 p11.2 119417 ChimerSeq ChiTaRs ChiTaRs TMOD3-MCF2 TMOD3 chr15 52122035 MCF2 chrX 138664301 Exonic hg19 NA X13230 Out-of-frame Inter-chr q21.2 q27.1 119418 ChimerSeq ChiTaRs ChiTaRs AP1G1-CA12 AP1G1 chr16 71805102 CA12 chr15 63615733 Exonic hg19 NA AL050025 Out-of-frame Inter-chr q22.2 q22.2 119419 ChimerSeq ChiTaRs ChiTaRs ZNF611-DYNC1LI2 ZNF611 chr19 53238293 DYNC1LI2 chr16 66768121 Exonic hg19 NA BU072510 Out-of-frame Inter-chr q13.41 Transcription factor q22.1 119420 ChimerSeq ChiTaRs ChiTaRs VDR-SLC1A5 VDR chr12 48235575 SLC1A5 chr19 47278590 Exonic hg19 NA BG272237 Out-of-frame Inter-chr q13.11 Tumor suppressor gene Transcription factor q13.32 119421 ChimerSeq ChiTaRs ChiTaRs LITAF-CD68 LITAF chr16 11642584 CD68 chr17 7483865 Exonic hg19 NA CB529095 Out-of-frame Inter-chr p13.13 Tumor suppressor gene p13.1 119422 ChimerSeq ChiTaRs ChiTaRs RABEP1-FAM105B RABEP1 chr17 5241607 FAM105B chr5 14697542 Exonic hg19 NA BC014025 Out-of-frame Inter-chr p13.2 119423 ChimerSeq ChiTaRs ChiTaRs CBX4-DBI CBX4 chr17 77812611 DBI chr2 120124581 Exonic hg19 NA AV752007 Out-of-frame Inter-chr q25.3 q14.2 119424 ChimerSeq ChiTaRs ChiTaRs MBP-PAXIP1 MBP chr18 74729011 PAXIP1 chr7 154774947 Exonic hg19 NA DA327424 Out-of-frame Inter-chr q23 q36.2 119425 ChimerSeq ChiTaRs ChiTaRs UBL7-HSPA5 UBL7 chr15 74738557 HSPA5 chr9 128003385 Exonic hg19 NA AI042094 Out-of-frame Inter-chr q24.1 q33.3 119426 ChimerSeq ChiTaRs ChiTaRs MGRN1-CRIM1 MGRN1 chr16 4740971 CRIM1 chr2 36776484 Exonic hg19 NA AI767084 Out-of-frame Inter-chr p13.3 p22.2 119427 ChimerSeq ChiTaRs ChiTaRs CCL4-MCL1 CCL4 chr17 34433003 MCL1 chr1 150550874 Exonic hg19 NA CA307816 Out-of-frame Inter-chr q12 q21.2 Oncogene 119428 ChimerSeq ChiTaRs ChiTaRs BSG-NFIX BSG chr19 580787 NFIX chr19 13135833 Exonic hg19 NA XX000018 Out-of-frame Intra-chr p13.3 p13.13 Transcription factor 119429 ChimerSeq ChiTaRs ChiTaRs MAPK1-RFT1 MAPK1 chr22 22117063 RFT1 chr3 53126586 Exonic hg19 NA AW752527 Out-of-frame Inter-chr q11.22 Oncogene p21.1 119430 ChimerSeq ChiTaRs ChiTaRs CYTH1-ZC3H7A CYTH1 chr17 76778341 ZC3H7A chr16 11870708 Exonic hg19 NA CT002559 Out-of-frame Inter-chr q25.3 p13.13 119431 ChimerSeq ChiTaRs ChiTaRs APLP2-EIF2S2 APLP2 chr11 129991623 EIF2S2 chr20 32691291 Exonic hg19 NA BU543690 Out-of-frame Inter-chr q24.3 q11.22 119432 ChimerSeq ChiTaRs ChiTaRs CHD2-TMCO3 CHD2 chr15 93444530 TMCO3 chr13 114201613 Exonic hg19 NA BQ644824 Out-of-frame Inter-chr q26.1 q34 119433 ChimerSeq ChiTaRs ChiTaRs ZSCAN30-GNB1 ZSCAN30 chr18 32870151 GNB1 chr1 1747201 Exonic hg19 NA BF203521 Out-of-frame Inter-chr q12.2 Transcription factor p36.33 119434 ChimerSeq ChiTaRs ChiTaRs BOLA2-PFN1 BOLA2 chr16 29820056 PFN1 chr17 4848950 Exonic hg19 NA BU175097 Out-of-frame Inter-chr p11.2 p13.2 Tumor suppressor gene 119435 ChimerSeq ChiTaRs ChiTaRs CADM1-MYO18A CADM1 chr11 115044438 MYO18A chr17 27400731 Exonic hg19 NA BG271776 Out-of-frame Inter-chr q23.3 Tumor suppressor gene q11.2 Oncogene 119436 ChimerSeq ChiTaRs ChiTaRs NIN-DOK3 NIN chr14 51226979 DOK3 chr5 176930797 Exonic hg19 NA BX644492 Out-of-frame Inter-chr q22.1 Oncogene q35.3 Tumor suppressor gene 119437 ChimerSeq ChiTaRs ChiTaRs BOLA2-AP1B1 BOLA2 chr16 29859346 AP1B1 chr22 29754725 Exonic hg19 NA AI394032 Out-of-frame Inter-chr p11.2 q12.2 119438 ChimerSeq ChiTaRs ChiTaRs ZNF283-NDUFAF2 ZNF283 chr19 44341427 NDUFAF2 chr5 60243531 Exonic hg19 NA BM688312 Out-of-frame Inter-chr q13.31 Transcription factor q12.1 119439 ChimerSeq ChiTaRs ChiTaRs PAK1-TSTD2 PAK1 chr11 77066825 TSTD2 chr9 100372690 Exonic hg19 NA AW856679 Out-of-frame Inter-chr q14.1 STE:STE20 q22.33 119440 ChimerSeq ChiTaRs ChiTaRs MFGE8-PABPC1 MFGE8 chr15 89445941 PABPC1 chr8 101730429 Exonic hg19 NA AW629981 Out-of-frame Inter-chr q26.1 q22.3 119441 ChimerSeq ChiTaRs ChiTaRs PPP6R1-SOHLH2 PPP6R1 chr19 55742831 SOHLH2 chr13 36742353 Exonic hg19 NA BQ432991 Out-of-frame Inter-chr q13.42 q13.3 Transcription factor 119442 ChimerSeq ChiTaRs ChiTaRs TSC22D1-IGF2BP2 TSC22D1 chr13 45077227 IGF2BP2 chr3 185361551 Exonic hg19 NA AF057352 Out-of-frame Inter-chr q14.11 Tumor suppressor gene Transcription factor q27.2 119443 ChimerSeq ChiTaRs ChiTaRs RPL4-LOC100505761 RPL4 chr15 66797205 LOC100505761 chr10 104215798 Exonic hg19 NA DB504144 Out-of-frame Inter-chr q22.31 119444 ChimerSeq ChiTaRs ChiTaRs KRT4-KRT4 KRT4 chr12 53200681 KRT4 chr12 53200341 Exonic hg19 NA AW238296 Out-of-frame Intra-chr q13.13 q13.13 119445 ChimerSeq ChiTaRs ChiTaRs RPSAP52-ELAC2 RPSAP52 chr12 66221868 ELAC2 chr17 12895708 Exonic hg19 NA BC046924 Out-of-frame Inter-chr q14.3 p12 119446 ChimerSeq ChiTaRs ChiTaRs GOLGA3-ZC3H15 GOLGA3 chr12 133402836 ZC3H15 chr2 187367285 Exonic hg19 NA BQ946452 Out-of-frame Inter-chr q24.33 q32.1 119447 ChimerSeq ChiTaRs ChiTaRs SF1-CGA SF1 chr11 64536969 CGA chr6 87795966 Exonic hg19 NA AV747863 Out-of-frame Inter-chr q13.1 q14.3 119448 ChimerSeq ChiTaRs ChiTaRs AP3D1-WIPI2 AP3D1 chr19 2137780 WIPI2 chr7 5270626 Exonic hg19 NA AF130042 Out-of-frame Inter-chr p13.3 p22.1 119449 ChimerSeq ChiTaRs ChiTaRs TPM4-PRR24 TPM4 chr19 16198867 PRR24 chr19 47778403 Exonic hg19 NA CN275218 Out-of-frame Intra-chr p13.12 119450 ChimerSeq ChiTaRs ChiTaRs ESD-SHISA5 ESD chr13 47345624 SHISA5 chr3 48510843 Exonic hg19 NA BG290854 Out-of-frame Inter-chr q14.2 p21.31 119451 ChimerSeq ChiTaRs ChiTaRs TRIM16L-METTL21A TRIM16L chr17 18638223 METTL21A chr2 208474029 Exonic hg19 NA BM479642 Out-of-frame Inter-chr p11.2 q33.3 119452 ChimerSeq ChiTaRs ChiTaRs GIPC1-ANKZF1 GIPC1 chr19 14602558 ANKZF1 chr2 220096694 Exonic hg19 NA DA368878 Out-of-frame Inter-chr p13.12 q35 Transcription factor 119453 ChimerSeq ChiTaRs ChiTaRs FOPNL-SMA4 FOPNL chr16 15980015 SMA4 chr5 69594091 Exonic hg19 NA AA724468 Out-of-frame Inter-chr p13.11 119454 ChimerSeq ChiTaRs ChiTaRs MACROD2-IFNGR2 MACROD2 chr20 15156057 IFNGR2 chr21 34804893 Exonic hg19 NA AW935044 Out-of-frame Inter-chr p12.1 119455 ChimerSeq ChiTaRs ChiTaRs INF2-VPS13C INF2 chr14 105180854 VPS13C chr15 62155694 Exonic hg19 NA AA330277 Out-of-frame Inter-chr q32.33 q22.2 119456 ChimerSeq ChiTaRs ChiTaRs FLT3LG-RPL3 FLT3LG chr19 49994778 RPL3 chr22 39708915 Exonic hg19 NA BG505035 Out-of-frame Inter-chr q13.33 q13.1 119457 ChimerSeq ChiTaRs ChiTaRs USP5-SLTM USP5 chr12 6970714 SLTM chr15 59225648 Exonic hg19 NA AK308021 Out-of-frame Inter-chr p13.31 q22.1 119458 ChimerSeq ChiTaRs ChiTaRs OSGEP-SELENBP1 OSGEP chr14 20922971 SELENBP1 chr1 151341509 Exonic hg19 NA DA879055 Out-of-frame Inter-chr q11.2 q21.3 Tumor suppressor gene 119459 ChimerSeq ChiTaRs ChiTaRs SKA1-NBAS SKA1 chr18 47902288 NBAS chr2 15427218 Exonic hg19 NA BE618276 Out-of-frame Inter-chr q21.1 p24.3 119460 ChimerSeq ChiTaRs ChiTaRs MALAT1-SPRED1 MALAT1 chr11 65269819 SPRED1 chr15 38643887 Exonic hg19 NA AA774258 Out-of-frame Inter-chr q13.1 q14 119461 ChimerSeq ChiTaRs ChiTaRs AKT2-BLOC1S1 AKT2 chr19 40738665 BLOC1S1 chr12 56112963 Exonic hg19 NA BM692309 Out-of-frame Inter-chr q13.2 AGC:Akt Oncogene q13.2 119462 ChimerSeq ChiTaRs ChiTaRs NEDD8-MDP1-ARV1 NEDD8-MDP1 chr14 24701536 ARV1 chr1 231125964 Exonic hg19 NA CA309107 Out-of-frame Inter-chr q12 q42.2 119463 ChimerSeq ChiTaRs ChiTaRs MYH10-GAS8 MYH10 chr17 8512595 GAS8 chr16 90096450 Exonic hg19 NA BE153143 Out-of-frame Inter-chr p13.1 q24.3 119464 ChimerSeq ChiTaRs ChiTaRs ESD-C2orf61 ESD chr13 47371264 C2orf61 chr2 47387721 Exonic hg19 NA BF700255 Out-of-frame Inter-chr q14.2 119465 ChimerSeq ChiTaRs ChiTaRs BOLA2-ETFDH BOLA2 chr16 29831352 ETFDH chr4 159627945 Exonic hg19 NA BE172552 Out-of-frame Inter-chr p11.2 q32.1 119466 ChimerSeq ChiTaRs ChiTaRs CCL8-ARL8B CCL8 chr17 32648421 ARL8B chr3 5220976 Exonic hg19 NA AI493177 3'UTR-3'UTR Inter-chr q12 p26.1 119467 ChimerSeq ChiTaRs ChiTaRs GAPDH-FAM3C GAPDH chr12 6644020 FAM3C chr7 121000124 Exonic hg19 NA DA778207 Out-of-frame Inter-chr p13.31 q31.31 119468 ChimerSeq ChiTaRs ChiTaRs ATMIN-EIF4E2 ATMIN chr16 81080140 EIF4E2 chr2 233448154 Exonic hg19 NA AI004991 Out-of-frame Inter-chr q23.2 Tumor suppressor gene Transcription factor q37.1 119469 ChimerSeq ChiTaRs ChiTaRs NOC4L-PTOV1 NOC4L chr12 132637015 PTOV1 chr19 50361814 Exonic hg19 NA CA428021 Out-of-frame Inter-chr q24.33 q13.33 119470 ChimerSeq ChiTaRs ChiTaRs BCL11B-TRA@ BCL11B chr14 99737555 TRA@ chr14 22931918 Exonic hg19 NA AY752977 Out-of-frame Intra-chr q32.2 Oncogene Transcription factor q11.2 119471 ChimerSeq ChiTaRs ChiTaRs C11orf71-LOXHD1 C11orf71 chr11 114271252 LOXHD1 chr18 44065002 Exonic hg19 NA BI559911 Out-of-frame Inter-chr q23.2 q21.1 119472 ChimerSeq ChiTaRs ChiTaRs WASF3-XRN2 WASF3 chr13 27261841 XRN2 chr20 21346298 Exonic hg19 NA BQ683058 Out-of-frame Inter-chr q12.13 p11.22 119473 ChimerSeq ChiTaRs ChiTaRs B2M-NTNG1 B2M chr15 45010343 NTNG1 chr1 108014986 Exonic hg19 NA BM783943 Out-of-frame Inter-chr Oncogene p13.3 119474 ChimerSeq ChiTaRs ChiTaRs POLR1D-CHORDC1 POLR1D chr13 28240850 CHORDC1 chr11 89944383 Exonic hg19 NA BM544526 Out-of-frame Inter-chr q12.2 q14.3 119475 ChimerSeq ChiTaRs ChiTaRs APLP2-HDHD2 APLP2 chr11 129992298 HDHD2 chr18 44634512 Exonic hg19 NA BP316568 Out-of-frame Inter-chr q24.3 q21.1 119476 ChimerSeq ChiTaRs ChiTaRs LTBP3-ARPC2 LTBP3 chr11 65308101 ARPC2 chr2 219081912 Exonic hg19 NA BP338065 Out-of-frame Inter-chr q13.1 q35 119477 ChimerSeq ChiTaRs ChiTaRs SRP54-CRTAP SRP54 chr14 35498773 CRTAP chr3 33166022 Exonic hg19 NA AI608636 3'UTR-CDS Inter-chr q13.2 p22.3 119478 ChimerSeq ChiTaRs ChiTaRs NOS2-TTC37 NOS2 chr17 26220391 TTC37 chr5 94800124 Exonic hg19 NA AK310926 Out-of-frame Inter-chr q11.2 q15 119479 ChimerSeq ChiTaRs ChiTaRs GAPDH-RPL23 GAPDH chr12 6646535 RPL23 chr17 37008897 Exonic hg19 NA DW440511 Out-of-frame Inter-chr p13.31 q12 119480 ChimerSeq ChiTaRs ChiTaRs CD33-LOC100507412 CD33 chr19 51743271 LOC100507412 chr? 117607 Exonic hg19 NA CA426969 Out-of-frame Inter-chr q13.41 119481 ChimerSeq ChiTaRs ChiTaRs E2F1-RDH11 E2F1 chr20 32274170 RDH11 chr14 68156930 Exonic hg19 NA BQ962146 Out-of-frame Inter-chr q11.22 Tumor suppressor gene Transcription factor q24.1 119482 ChimerSeq ChiTaRs ChiTaRs SULT2A1-SERPINC1 SULT2A1 chr19 48374252 SERPINC1 chr1 173883739 Exonic hg19 NA AI110855 Out-of-frame Inter-chr q13.33 q25.1 119483 ChimerSeq ChiTaRs ChiTaRs GIT2-RPS4X GIT2 chr12 110423653 RPS4X chrX 71493161 Exonic hg19 NA AA075606 Out-of-frame Inter-chr q24.11 q13.1 119484 ChimerSeq ChiTaRs ChiTaRs DIDO1-LOC100507351 DIDO1 chr20 61536671 LOC100507351 chr17 75551757 Exonic hg19 NA AI651760 Out-of-frame Inter-chr q13.33 Tumor suppressor gene 119485 ChimerSeq ChiTaRs ChiTaRs ANKRD52-RPL13A ANKRD52 chr12 56645863 RPL13A chr19 49993801 Exonic hg19 NA AX747058 Out-of-frame Inter-chr q13.3 q13.33 119486 ChimerSeq ChiTaRs ChiTaRs IER3IP1-LOC100505549 IER3IP1 chr18 44683909 LOC100505549 chr18 55351268 Exonic hg19 NA CB241571 Out-of-frame Intra-chr q21.1 119487 ChimerSeq ChiTaRs ChiTaRs BCL2L12-LOC100507412 BCL2L12 chr19 50172313 LOC100507412 chr? 109541 Exonic hg19 NA BP320834 Out-of-frame Inter-chr q13.33 119488 ChimerSeq ChiTaRs ChiTaRs RPL4-LOC100505761 RPL4 chr15 66795810 LOC100505761 chr10 104215798 Exonic hg19 NA DB575395 Out-of-frame Inter-chr q22.31 119489 ChimerSeq ChiTaRs ChiTaRs SEZ6L-GGA2 SEZ6L chr22 26776431 GGA2 chr16 23475640 Exonic hg19 NA BP396134 Out-of-frame Inter-chr q12.1 p12.2 119490 ChimerSeq ChiTaRs ChiTaRs PIGQ-TMEM241 PIGQ chr16 633346 TMEM241 chr18 20932226 Exonic hg19 NA BF090869 Out-of-frame Inter-chr p13.3 q11.2 119491 ChimerSeq ChiTaRs ChiTaRs COL1A1-MRFAP1 COL1A1 chr17 48263305 MRFAP1 chr4 6642689 Exonic hg19 NA CA428711 Out-of-frame Inter-chr q21.33 Oncogene p16.1 119492 ChimerSeq ChiTaRs ChiTaRs ZFP36-YY1AP1 ZFP36 chr19 39899819 YY1AP1 chr1 155629534 Exonic hg19 NA BF930057 Out-of-frame Inter-chr q13.2 Tumor suppressor gene q22 119493 ChimerSeq ChiTaRs ChiTaRs CLPTM1-PNPO CLPTM1 chr19 45497052 PNPO chr17 46023726 Exonic hg19 NA BM674466 Out-of-frame Inter-chr q13.32 q21.32 119494 ChimerSeq ChiTaRs ChiTaRs TRPC4AP-LMF2 TRPC4AP chr20 33680599 LMF2 chr22 50941380 Exonic hg19 NA AK130818 Out-of-frame Inter-chr q11.22 q13.33 119495 ChimerSeq ChiTaRs ChiTaRs EIF5A-RALY EIF5A chr17 7214368 RALY chr20 32602679 Exonic hg19 NA BG255468 Out-of-frame Inter-chr p13.1 q11.22 119496 ChimerSeq ChiTaRs ChiTaRs STT3A-LIPG STT3A chr11 125472235 LIPG chr18 47091715 Exonic hg19 NA AU139929 Out-of-frame Inter-chr q24.2 q21.1 119497 ChimerSeq ChiTaRs ChiTaRs TCF3-NAA40 TCF3 chr19 1610652 NAA40 chr11 63723488 Exonic hg19 NA BQ882778 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor q13.1 119498 ChimerSeq ChiTaRs ChiTaRs USP10-CSNK2A2 USP10 chr16 84733717 CSNK2A2 chr16 58192021 Exonic hg19 NA BM470938 CDS-3'UTR Intra-chr q24.1 q21 119499 ChimerSeq ChiTaRs ChiTaRs C18orf25-FXR1 C18orf25 chr18 43833786 FXR1 chr3 180693914 Exonic hg19 NA AV746723 Out-of-frame Inter-chr q21.1 q26.33 119500 ChimerSeq ChiTaRs ChiTaRs PRDX5-SNCAIP PRDX5 chr11 64089281 SNCAIP chr5 121758841 Exonic hg19 NA AA992624 Out-of-frame Inter-chr q13.1 q23.2 119501 ChimerSeq ChiTaRs ChiTaRs CLN6-CHST2 CLN6 chr15 68499406 CHST2 chr3 142841558 Exonic hg19 NA BQ188039 Out-of-frame Inter-chr q23 q24 119502 ChimerSeq ChiTaRs ChiTaRs REXO2-MPHOSPH8 REXO2 chr11 114311417 MPHOSPH8 chr13 20221142 Exonic hg19 NA BP213105 Out-of-frame Inter-chr q23.2 q12.11 119503 ChimerSeq ChiTaRs ChiTaRs LSMD1-YLPM1 LSMD1 chr17 7760355 YLPM1 chr14 75266369 Exonic hg19 NA AW274870 Out-of-frame Inter-chr q24.3 119504 ChimerSeq ChiTaRs ChiTaRs ARHGEF18-HSCB ARHGEF18 chr19 7516152 HSCB chr22 29153064 Exonic hg19 NA CR993366 Out-of-frame Inter-chr p13.2 q12.1 119505 ChimerSeq ChiTaRs ChiTaRs LARP4-NFIL3 LARP4 chr12 50794811 NFIL3 chr9 94172795 Exonic hg19 NA DA585128 In-Frame Inter-chr q13.12 q22.31 Transcription factor 119506 ChimerSeq ChiTaRs ChiTaRs TMEM107-PGK1 TMEM107 chr17 8076906 PGK1 chrX 77359744 Exonic hg19 NA DC340832 Out-of-frame Inter-chr p13.1 q21.1 119507 ChimerSeq ChiTaRs ChiTaRs EWSR1-ATP1A1 EWSR1 chr22 29696326 ATP1A1 chr1 116929988 Exonic hg19 NA BU629169 Out-of-frame Inter-chr q12.2 p13.1 119508 ChimerSeq ChiTaRs ChiTaRs CPNE1-AVL9 CPNE1 chr20 34252761 AVL9 chr7 32909704 Exonic hg19 NA CN371894 Out-of-frame Inter-chr q11.22 p14.3 119509 ChimerSeq ChiTaRs ChiTaRs TSHZ1-BGN TSHZ1 chr18 72999940 BGN chrX 152774612 Exonic hg19 NA AX746813 Out-of-frame Inter-chr q22.3 Transcription factor q28 119510 ChimerSeq ChiTaRs ChiTaRs EMP1-TTC28-AS1 EMP1 chr12 13368917 TTC28-AS1 chr22 28378409 Exonic hg19 NA BG315010 Out-of-frame Inter-chr p13.1 Tumor suppressor gene q12.1 119511 ChimerSeq ChiTaRs ChiTaRs ABCA5-WDR55 ABCA5 chr17 67279833 WDR55 chr5 140048506 Exonic hg19 NA AK000202 Out-of-frame Inter-chr q24.3 q31.3 119512 ChimerSeq ChiTaRs ChiTaRs SIN3A-SIN3A SIN3A chr15 75684714 SIN3A chr15 75687125 Exonic hg19 NA AW851387 Out-of-frame Intra-chr q24.2 q24.2 119513 ChimerSeq ChiTaRs ChiTaRs CHAMP1-ZSCAN18 CHAMP1 chr13 115089446 ZSCAN18 chr19 58595340 Exonic hg19 NA DA094713 Out-of-frame Inter-chr q34 Transcription factor q13.43 Transcription factor 119514 ChimerSeq ChiTaRs ChiTaRs ADRBK1-MTA1 ADRBK1 chr11 67049417 MTA1 chr14 105886369 Exonic hg19 NA BI911041 Out-of-frame Inter-chr q32.33 119515 ChimerSeq ChiTaRs ChiTaRs ACTG1-MEPCE ACTG1 chr17 79479167 MEPCE chr7 100030966 Exonic hg19 NA BI061732 Out-of-frame Inter-chr q25.3 q22.1 119516 ChimerSeq ChiTaRs ChiTaRs TRBV20-1-TRBV20-1 TRBV20-1 chr16 2011586 TRBV20-1 chr16 2011546 Exonic hg19 NA AA469274 Out-of-frame Intra-chr 119517 ChimerSeq ChiTaRs ChiTaRs NHP2L1-HNRNPD NHP2L1 chr22 42070965 HNRNPD chr4 83278036 Exonic hg19 NA BU632297 Out-of-frame Inter-chr q21.22 119518 ChimerSeq ChiTaRs ChiTaRs SNRPN-TUBA1B SNRPN chr15 25337026 TUBA1B chr12 49522701 Exonic hg19 NA DA368267 Out-of-frame Inter-chr q11.2 q13.12 119519 ChimerSeq ChiTaRs ChiTaRs TPCN1-YARS2 TPCN1 chr12 113698239 YARS2 chr12 32906885 Exonic hg19 NA AA663785 Out-of-frame Intra-chr q24.13 p11.21 119520 ChimerSeq ChiTaRs ChiTaRs TBX3-KRT5 TBX3 chr12 115108355 KRT5 chr12 52911682 Exonic hg19 NA AI675631 Out-of-frame Intra-chr q24.21 Transcription factor q13.13 119521 ChimerSeq ChiTaRs ChiTaRs SYN3-HAPLN3 SYN3 chr22 33255503 HAPLN3 chr15 89421084 Exonic hg19 NA EB387648 Out-of-frame Inter-chr q12.3 q26.1 119522 ChimerSeq ChiTaRs ChiTaRs APLP2-MAD1L1 APLP2 chr11 129980509 MAD1L1 chr7 2270296 Exonic hg19 NA BP359675 Out-of-frame Inter-chr q24.3 p22.3 Tumor suppressor gene 119523 ChimerSeq ChiTaRs ChiTaRs TBC1D24-MAU2 TBC1D24 chr16 2570208 MAU2 chr19 19467643 Exonic hg19 NA AI824289 Out-of-frame Inter-chr p13.3 p13.11 119524 ChimerSeq ChiTaRs ChiTaRs CCDC117-BLMH CCDC117 chr22 29183164 BLMH chr17 28575221 Exonic hg19 NA BC004486 Out-of-frame Inter-chr q12.1 q11.2 119525 ChimerSeq ChiTaRs ChiTaRs SNRPN-ARHGEF7 SNRPN chr15 25223717 ARHGEF7 chr13 111957094 Exonic hg19 NA AI675348 Out-of-frame Inter-chr q11.2 q34 119526 ChimerSeq ChiTaRs ChiTaRs MAPK1IP1L-FCF1 MAPK1IP1L chr14 55532489 FCF1 chr14 75203075 Exonic hg19 NA AK025580 Out-of-frame Intra-chr q22.3 q24.3 119527 ChimerSeq ChiTaRs ChiTaRs AMICA1-EHBP1 AMICA1 chr11 118076672 EHBP1 chr2 63272267 Exonic hg19 NA CD104306 Out-of-frame Inter-chr p15 119528 ChimerSeq ChiTaRs ChiTaRs CHD3-GDI1 CHD3 chr17 7788331 GDI1 chrX 153665521 Exonic hg19 NA DA685931 Out-of-frame Inter-chr p13.1 q28 119529 ChimerSeq ChiTaRs ChiTaRs DOT1L-NEAT1 DOT1L chr19 2225432 NEAT1 chr11 65191174 Exonic hg19 NA BE772409 Out-of-frame Inter-chr p13.3 Oncogene Transcription factor q13.1 119530 ChimerSeq ChiTaRs ChiTaRs ZNF461-LRRC28 ZNF461 chr19 37157739 LRRC28 chr15 99892570 Exonic hg19 NA BU664229 5'UTR-CDS Inter-chr q13.12 Transcription factor q26.3 119531 ChimerSeq ChiTaRs ChiTaRs CCDC88C-MXRA7 CCDC88C chr14 91809987 MXRA7 chr17 74676305 Exonic hg19 NA BG211337 Out-of-frame Inter-chr q32.12 q25.1 119532 ChimerSeq ChiTaRs ChiTaRs HYOU1-PSPH HYOU1 chr11 118923019 PSPH chr7 56131325 Exonic hg19 NA AW606659 Out-of-frame Inter-chr p11.2 119533 ChimerSeq ChiTaRs ChiTaRs TRMT2A-SRRM3 TRMT2A chr22 20104492 SRRM3 chr7 75877539 Exonic hg19 NA BG912150 Out-of-frame Inter-chr q11.21 q11.23 119534 ChimerSeq ChiTaRs ChiTaRs ZNF320-TMEM192 ZNF320 chr19 53385106 TMEM192 chr4 165999579 Exonic hg19 NA AK129992 Out-of-frame Inter-chr q13.41 Transcription factor q32.3 119535 ChimerSeq ChiTaRs ChiTaRs ACSBG1-ABCG1 ACSBG1 chr15 78521908 ABCG1 chr21 43645835 Exonic hg19 NA U34919 Out-of-frame Inter-chr q25.1 q22.3 119536 ChimerSeq ChiTaRs ChiTaRs MALAT1-MX2 MALAT1 chr11 65268579 MX2 chr21 42737892 Exonic hg19 NA BE763753 Out-of-frame Inter-chr q13.1 q22.3 119537 ChimerSeq ChiTaRs ChiTaRs PPP6R2-INTS3 PPP6R2 chr22 50881717 INTS3 chr1 153735827 Exonic hg19 NA BE719285 Out-of-frame Inter-chr q13.33 q21.3 119538 ChimerSeq ChiTaRs ChiTaRs PLIN3-DUSP5 PLIN3 chr19 4838822 DUSP5 chr10 112270285 Exonic hg19 NA AI743409 Out-of-frame Inter-chr p13.3 q25.2 Tumor suppressor gene 119539 ChimerSeq ChiTaRs ChiTaRs TNRC6B-TMEM184B TNRC6B chr22 40574145 TMEM184B chr22 38642016 Exonic hg19 NA DA995057 Out-of-frame Intra-chr q13.1 q13.1 Seq+ 119540 ChimerSeq ChiTaRs ChiTaRs SYNM-KIF5B SYNM chr15 99675654 KIF5B chr10 32299994 Exonic hg19 NA BF825715 Out-of-frame Inter-chr q26.3 Tumor suppressor gene p11.22 119541 ChimerSeq ChiTaRs ChiTaRs DYNC1H1-UBR4 DYNC1H1 chr14 102517603 UBR4 chr1 19403263 Exonic hg19 NA AA563608 Out-of-frame Inter-chr q32.31 p36.13 119542 ChimerSeq ChiTaRs ChiTaRs STK38L-ALB STK38L chr12 27476263 ALB chr4 74279302 Exonic hg19 NA AI114516 Out-of-frame Inter-chr p11.23 q13.3 119543 ChimerSeq ChiTaRs ChiTaRs SLC25A3-FAM111A SLC25A3 chr12 98995482 FAM111A chr11 58921379 Exonic hg19 NA BU684362 Out-of-frame Inter-chr q23.1 q12.1 119544 ChimerSeq ChiTaRs ChiTaRs MALAT1-MAP4K3 MALAT1 chr11 65266835 MAP4K3 chr2 39477622 Exonic hg19 NA BF990821 Out-of-frame Inter-chr q13.1 p22.1 119545 ChimerSeq ChiTaRs ChiTaRs RAB5B-CDH23 RAB5B chr12 56374291 CDH23 chr10 73520271 Exonic hg19 NA AA284272 Out-of-frame Inter-chr q13.2 q22.1 119546 ChimerSeq ChiTaRs ChiTaRs RNU12-PLP1 RNU12 chr22 43011399 PLP1 chrX 103031768 Exonic hg19 NA DA386793 5'UTR-5'UTR Inter-chr q13.2 q22.2 119547 ChimerSeq ChiTaRs ChiTaRs MBNL2-SCG2 MBNL2 chr13 98043667 SCG2 chr2 224461732 Exonic hg19 NA AV727955 Out-of-frame Inter-chr q32.1 Transcription factor q36.1 Tumor suppressor gene 119548 ChimerSeq ChiTaRs ChiTaRs RNF167-IGFBP5 RNF167 chr17 4848101 IGFBP5 chr2 217539033 Exonic hg19 NA BE166199 Out-of-frame Inter-chr p13.2 q35 Tumor suppressor gene 119549 ChimerSeq ChiTaRs ChiTaRs COL6A1-NPIPB7 COL6A1 chr21 47424962 NPIPB7 chr16 28725284 Exonic hg19 NA BQ181235 Out-of-frame Inter-chr q22.3 p12.1 119550 ChimerSeq ChiTaRs ChiTaRs SDSL-MBOAT7 SDSL chr12 113874629 MBOAT7 chr19 54677157 Exonic hg19 NA AV727483 Out-of-frame Inter-chr q24.13 119551 ChimerSeq ChiTaRs ChiTaRs ACTN4-ETV5 ACTN4 chr19 39220811 ETV5 chr3 185797834 Exonic hg19 NA BU623662 Out-of-frame Inter-chr q27.2 Oncogene Transcription factor 119552 ChimerSeq ChiTaRs ChiTaRs ATP6V1D-RPA1 ATP6V1D chr14 67804838 RPA1 chr17 1780575 Exonic hg19 NA AI052509 Out-of-frame Inter-chr q23.3 p13.3 Tumor suppressor gene 119553 ChimerSeq ChiTaRs ChiTaRs NDUFA13-SRRM2 NDUFA13 chr19 19645267 SRRM2 chr16 2813305 Exonic hg19 NA CN266633 Out-of-frame Inter-chr p13.11 p13.3 119554 ChimerSeq ChiTaRs ChiTaRs IMP3-MTHFD1L IMP3 chr15 75932561 MTHFD1L chr6 151281493 Exonic hg19 NA BP339812 Out-of-frame Inter-chr q24.2 q25.1 119555 ChimerSeq ChiTaRs ChiTaRs TMTC3-RPL4 TMTC3 chr12 88589368 RPL4 chr15 66791661 Exonic hg19 NA AK290436 Out-of-frame Inter-chr q21.32 q22.31 119556 ChimerSeq ChiTaRs ChiTaRs HBA2-CSH2 HBA2 chr16 223310 CSH2 chr17 61949372 Exonic hg19 NA DR979761 Out-of-frame Inter-chr p13.3 q23.3 119557 ChimerSeq ChiTaRs ChiTaRs SEPT5-LOC100507412 2005_ 9_ 1_ chr22 19707876 LOC100507412 chr? 109549 Exonic hg19 NA DA523560 Out-of-frame Inter-chr 119558 ChimerSeq ChiTaRs ChiTaRs BRSK1-UCK1 BRSK1 chr19 55800890 UCK1 chr9 134404397 Exonic hg19 NA BF203809 Out-of-frame Inter-chr q13.42 CAMK:CAMKL Tumor suppressor gene q34.13 119559 ChimerSeq ChiTaRs ChiTaRs TMEM50B-C5orf30 TMEM50B chr21 34852241 C5orf30 chr5 102601608 Exonic hg19 NA DA619106 5'UTR-5'UTR Inter-chr q21.1 119560 ChimerSeq ChiTaRs ChiTaRs RAVER1-SYNCRIP RAVER1 chr19 10434245 SYNCRIP chr6 86324740 Exonic hg19 NA BU151397 Out-of-frame Inter-chr p13.2 q14.3 119561 ChimerSeq ChiTaRs ChiTaRs CTDNEP1-CENPP CTDNEP1 chr17 7149690 CENPP chr9 95129776 Exonic hg19 NA BG945796 Out-of-frame Inter-chr p13.1 q22.31 119562 ChimerSeq ChiTaRs ChiTaRs MNT-RPL38 MNT chr17 2287508 RPL38 chr17 72199818 Exonic hg19 NA CA313275 Out-of-frame Intra-chr p13.3 Tumor suppressor gene Transcription factor q25.1 119563 ChimerSeq ChiTaRs ChiTaRs LASP1-BCL2L2-PABPN1 LASP1 chr17 37076617 BCL2L2-PABPN1 chr14 23793796 Exonic hg19 NA BF815794 Out-of-frame Inter-chr q12 q11.2 Oncogene 119564 ChimerSeq ChiTaRs ChiTaRs TRAPPC4-FBXL2 TRAPPC4 chr11 118894375 FBXL2 chr3 33430464 Exonic hg19 NA BU178535 Out-of-frame Inter-chr p22.3 119565 ChimerSeq ChiTaRs ChiTaRs PTTG1IP-MRPL33 PTTG1IP chr21 46282961 MRPL33 chr2 27997363 Exonic hg19 NA AJ706390 Out-of-frame Inter-chr q22.3 p23.2 119566 ChimerSeq ChiTaRs ChiTaRs CCND1-NFAT5 CCND1 chr11 69468032 NFAT5 chr16 69737639 Exonic hg19 NA BQ322337 Out-of-frame Inter-chr q13.3 Oncogene q22.1 Transcription factor 119567 ChimerSeq ChiTaRs ChiTaRs C17orf76-AS1-ZNF160 C17orf76-AS1 chr17 16345342 ZNF160 chr19 53570330 Exonic hg19 NA BU630952 Out-of-frame Inter-chr q13.42 Tumor suppressor gene 119568 ChimerSeq ChiTaRs ChiTaRs BRWD1-GSS BRWD1 chr21 40559066 GSS chr20 33516483 Exonic hg19 NA AW373865 Out-of-frame Inter-chr q22.2 q11.22 119569 ChimerSeq ChiTaRs ChiTaRs RPL38-PHF20 RPL38 chr17 72205423 PHF20 chr20 34359946 Exonic hg19 NA BP222381 Out-of-frame Inter-chr q25.1 q11.22 Transcription factor 119570 ChimerSeq ChiTaRs ChiTaRs TMEM218-STRADA TMEM218 chr11 124981513 STRADA chr17 61780816 Exonic hg19 NA AK309283 Out-of-frame Inter-chr q24.2 q23.3 Tumor suppressor gene 119571 ChimerSeq ChiTaRs ChiTaRs HSD11B2-SLC39A1 HSD11B2 chr16 67465408 SLC39A1 chr1 153934698 Exonic hg19 NA CD109953 Out-of-frame Inter-chr q22.1 q21.3 Tumor suppressor gene 119572 ChimerSeq ChiTaRs ChiTaRs PDE2A-KIAA1841 PDE2A chr11 72291982 KIAA1841 chr2 61315953 Exonic hg19 NA BE938766 Out-of-frame Inter-chr q13.4 p15 119573 ChimerSeq ChiTaRs ChiTaRs AAAS-ZNF414 AAAS chr12 53701314 ZNF414 chr19 8576625 Exonic hg19 NA AI523835 Out-of-frame Inter-chr q13.13 p13.2 Transcription factor 119574 ChimerSeq ChiTaRs ChiTaRs DOT1L-COL6A1 DOT1L chr19 2220143 COL6A1 chr21 47419985 Exonic hg19 NA BF847841 Out-of-frame Inter-chr p13.3 Oncogene Transcription factor q22.3 119575 ChimerSeq ChiTaRs ChiTaRs TTLL13-RAB1B TTLL13 chr15 90815442 RAB1B chr11 66044329 Exonic hg19 NA BI036020 Out-of-frame Inter-chr q13.2 119576 ChimerSeq ChiTaRs ChiTaRs NMB-ZNF35 NMB chr15 85200501 ZNF35 chr3 44701075 Exonic hg19 NA CD369519 Out-of-frame Inter-chr q25.2 Transcription factor 119577 ChimerSeq ChiTaRs ChiTaRs COL1A1-SUMO3 COL1A1 chr17 48261999 SUMO3 chr21 46226255 Exonic hg19 NA BU628173 Out-of-frame Inter-chr q21.33 Oncogene q22.3 119578 ChimerSeq ChiTaRs ChiTaRs CALM1-RALA CALM1 chr14 90871147 RALA chr7 39730002 Exonic hg19 NA CD366766 Out-of-frame Inter-chr q32.11 p14.1 119579 ChimerSeq ChiTaRs ChiTaRs RPL18-C15orf57 RPL18 chr19 49119421 C15orf57 chr15 40845397 Exonic hg19 NA CA309686 Out-of-frame Inter-chr q13.33 q15.1 119580 ChimerSeq ChiTaRs ChiTaRs BOLA2-CPNE7 BOLA2 chr16 29824648 CPNE7 chr16 89663405 Exonic hg19 NA DA524880 Out-of-frame Intra-chr p11.2 q24.3 Tumor suppressor gene 119581 ChimerSeq ChiTaRs ChiTaRs RNASE1-KCTD12 RNASE1 chr14 21271007 KCTD12 chr13 77458216 Exonic hg19 NA DA778433 Out-of-frame Inter-chr q11.2 q22.3 119582 ChimerSeq ChiTaRs ChiTaRs LIMA1-DDR1 LIMA1 chr12 50586278 DDR1 chr6 2160824 Exonic hg19 NA BG250113 Out-of-frame Inter-chr q13.12 Tumor suppressor gene TK:DDR 119583 ChimerSeq ChiTaRs ChiTaRs PPP6R1-ZGLP1 PPP6R1 chr19 55769840 ZGLP1 chr19 10416105 Exonic hg19 NA BM742279 Out-of-frame Intra-chr q13.42 p13.2 Transcription factor 119584 ChimerSeq ChiTaRs ChiTaRs LIMA1-SLC35F5 LIMA1 chr12 50595220 SLC35F5 chr2 114472573 Exonic hg19 NA DA041521 Out-of-frame Inter-chr q13.12 Tumor suppressor gene q14.1 119585 ChimerSeq ChiTaRs ChiTaRs C5AR1-SSR1 C5AR1 chr19 47824151 SSR1 chr6 7288771 Exonic hg19 NA BQ353656 Out-of-frame Inter-chr q13.32 p24.3 119586 ChimerSeq ChiTaRs ChiTaRs CYB5A-RPL10 CYB5A chr18 71928412 RPL10 chrX 153630471 Exonic hg19 NA CB164490 Out-of-frame Inter-chr q22.3 Tumor suppressor gene q28 Tumor suppressor gene 119587 ChimerSeq ChiTaRs ChiTaRs SAMM50-UNC5B SAMM50 chr22 44392409 UNC5B chr10 73061716 Exonic hg19 NA CB528606 Out-of-frame Inter-chr q13.31 q22.1 Tumor suppressor gene 119588 ChimerSeq ChiTaRs ChiTaRs AHCY-NPIPB7 AHCY chr20 32879331 NPIPB7 chr16 28745873 Exonic hg19 NA BQ647045 Out-of-frame Inter-chr q11.22 p12.1 119589 ChimerSeq ChiTaRs ChiTaRs AP3D1-TOP2B AP3D1 chr19 2114239 TOP2B chr3 25639871 Exonic hg19 NA CB128088 Out-of-frame Inter-chr p13.3 p24.2 119590 ChimerSeq ChiTaRs ChiTaRs CYBA-ST3GAL2 CYBA chr16 88717438 ST3GAL2 chr16 70413415 Exonic hg19 NA BC048338 Out-of-frame Intra-chr q24.2 q22.1 119591 ChimerSeq ChiTaRs ChiTaRs ZNF784-RPGRIP1L ZNF784 chr19 56132203 RPGRIP1L chr16 53689424 Exonic hg19 NA AI631545 Out-of-frame Inter-chr q13.42 Transcription factor q12.2 119592 ChimerSeq ChiTaRs ChiTaRs KRT13-GDI2 KRT13 chr17 39661864 GDI2 chr10 5842561 Exonic hg19 NA DA448093 Out-of-frame Inter-chr q21.2 p15.1 119593 ChimerSeq ChiTaRs ChiTaRs FAM96A-EIF4G2 FAM96A chr15 64380070 EIF4G2 chr11 10821108 Exonic hg19 NA AU125641 Out-of-frame Inter-chr q22.31 p15.4 119594 ChimerSeq ChiTaRs ChiTaRs CSH1-PAPPA CSH1 chr17 61972321 PAPPA chr9 119106884 Exonic hg19 NA BQ021880 Out-of-frame Inter-chr q23.3 q33.1 119595 ChimerSeq ChiTaRs ChiTaRs MBD2-DAGLB MBD2 chr18 51750664 DAGLB chr7 6502618 Exonic hg19 NA AL560936 Out-of-frame Inter-chr q21.2 Transcription factor p22.1 119596 ChimerSeq ChiTaRs ChiTaRs PDIA3-PDIA3 PDIA3 chr15 44063390 PDIA3 chr15 44059077 Exonic hg19 NA BF911999 Out-of-frame Intra-chr q15.3 q15.3 119597 ChimerSeq ChiTaRs ChiTaRs CLIC6-RPE65 CLIC6 chr21 36090243 RPE65 chr1 68894676 Exonic hg19 NA BI480708 Out-of-frame Inter-chr q22.12 p31.3 119598 ChimerSeq ChiTaRs ChiTaRs CAMTA2-PDE2A CAMTA2 chr17 4875682 PDE2A chr11 72305786 Exonic hg19 NA BQ677895 Out-of-frame Inter-chr p13.2 Transcription factor q13.4 119599 ChimerSeq ChiTaRs ChiTaRs CSH2-ORMDL1 CSH2 chr17 61950646 ORMDL1 chr2 190639354 Exonic hg19 NA BG009005 Out-of-frame Inter-chr q23.3 q32.2 119600 ChimerSeq ChiTaRs ChiTaRs RHOT1-SNHG1 RHOT1 chr17 30478535 SNHG1 chr11 62619835 Exonic hg19 NA BF803944 Out-of-frame Inter-chr q11.2 q12.3 119601 ChimerSeq ChiTaRs ChiTaRs BCL2L2-PABPN1-MLX BCL2L2-PABPN1 chr14 23793439 MLX chr17 40724333 Exonic hg19 NA L38933 Out-of-frame Inter-chr q11.2 Oncogene q21.2 119602 ChimerSeq ChiTaRs ChiTaRs SLC12A6-TES SLC12A6 chr15 34524934 TES chr7 115898429 Exonic hg19 NA AA143188 Out-of-frame Inter-chr q14 q31.2 Tumor suppressor gene 119603 ChimerSeq ChiTaRs ChiTaRs PSENEN-SLC38A3 PSENEN chr19 36245035 SLC38A3 chr3 50258233 Exonic hg19 NA BM544556 Out-of-frame Inter-chr q13.12 p21.31 119604 ChimerSeq ChiTaRs ChiTaRs KIF5A-CDK14 KIF5A chr12 57943986 CDK14 chr7 90836542 Exonic hg19 NA AA984341 Out-of-frame Inter-chr q13.3 q21.13 119605 ChimerSeq ChiTaRs ChiTaRs ARVCF-SNTA1 ARVCF chr22 19966588 SNTA1 chr20 32000148 Exonic hg19 NA BE700872 Out-of-frame Inter-chr q11.21 q11.21 119606 ChimerSeq ChiTaRs ChiTaRs EFTUD2-S1PR2 EFTUD2 chr17 42928511 S1PR2 chr19 10333477 Exonic hg19 NA BI005694 Out-of-frame Inter-chr q21.31 p13.2 119607 ChimerSeq ChiTaRs ChiTaRs SON-RPL12 SON chr21 34926623 RPL12 chr9 130210625 Exonic hg19 NA AA036700 Out-of-frame Inter-chr q22.11 Transcription factor q33.3 119608 ChimerSeq ChiTaRs ChiTaRs SLCO4A1-ZNF691 SLCO4A1 chr20 61303645 ZNF691 chr1 43317989 Exonic hg19 NA BU682335 Out-of-frame Inter-chr q13.33 p34.2 Transcription factor 119609 ChimerSeq ChiTaRs ChiTaRs C20orf62-PAFAH2 C20orf62 chr20 43090738 PAFAH2 chr1 26299106 Exonic hg19 NA AI218124 Out-of-frame Inter-chr p36.11 119610 ChimerSeq ChiTaRs ChiTaRs ATP5EP2-CSF1 ATP5EP2 chr13 28519727 CSF1 chr1 110465924 Exonic hg19 NA CA308567 Out-of-frame Inter-chr q12.2 p13.3 119611 ChimerSeq ChiTaRs ChiTaRs ILF3-C17orf80 ILF3 chr19 10781860 C17orf80 chr17 71244788 Exonic hg19 NA CB218537 Out-of-frame Inter-chr p13.2 q25.1 119612 ChimerSeq ChiTaRs ChiTaRs ANKRD12-SMCHD1 ANKRD12 chr18 9182518 SMCHD1 chr18 2703688 Exonic hg19 NA CN266894 Out-of-frame Intra-chr p11.22 p11.32 Tumor suppressor gene 119613 ChimerSeq ChiTaRs ChiTaRs CRYBB2-SHB CRYBB2 chr22 25620974 SHB chr9 37919775 Exonic hg19 NA BM712054 Out-of-frame Inter-chr q11.23 p13.1 119614 ChimerSeq ChiTaRs ChiTaRs NPRL3-FYN NPRL3 chr16 180590 FYN chr6 112017531 Exonic hg19 NA BQ432211 In-Frame Inter-chr p13.3 q21 TK:Src 119615 ChimerSeq ChiTaRs ChiTaRs TOB1-FBXO34 TOB1 chr17 48940824 FBXO34 chr14 55819885 Exonic hg19 NA BU603597 Out-of-frame Inter-chr q21.33 q22.3 119616 ChimerSeq ChiTaRs ChiTaRs MRPS26-NR1H2 MRPS26 chr20 3028499 NR1H2 chr19 50838102 Exonic hg19 NA AI807188 Out-of-frame Inter-chr p13 q13.33 Transcription factor 119617 ChimerSeq ChiTaRs ChiTaRs ENTPD6-MPG ENTPD6 chr20 25187698 MPG chr16 135232 Exonic hg19 NA EL582887 Out-of-frame Inter-chr p11.21 p13.3 119618 ChimerSeq ChiTaRs ChiTaRs USP2-CEP63 USP2 chr11 119228954 CEP63 chr3 134225977 Exonic hg19 NA CD671082 Out-of-frame Inter-chr q23.3 q22.2 119619 ChimerSeq ChiTaRs ChiTaRs ANKRD52-RPS21 ANKRD52 chr12 56646649 RPS21 chr20 60962379 Exonic hg19 NA BC036946 Out-of-frame Inter-chr q13.3 q13.33 119620 ChimerSeq ChiTaRs ChiTaRs C19orf6-NMT1 C19orf6 chr19 1010157 NMT1 chr17 43181086 Exonic hg19 NA BF811419 Out-of-frame Inter-chr q21.31 119621 ChimerSeq ChiTaRs ChiTaRs PRKACA-NDOR1 PRKACA chr19 14203841 NDOR1 chr9 140110420 Exonic hg19 NA BQ278860 Out-of-frame Inter-chr p13.12 q34.3 119622 ChimerSeq ChiTaRs ChiTaRs TTC3-UBR5 TTC3 chr21 38538884 UBR5 chr8 103271276 Exonic hg19 NA AW363719 Out-of-frame Inter-chr q22.13 q22.3 Oncogene 119623 ChimerSeq ChiTaRs ChiTaRs DYM-CYP19A1 DYM chr18 46586116 CYP19A1 chr15 51589934 Exonic hg19 NA BG004269 Out-of-frame Inter-chr q21.1 q21.2 119624 ChimerSeq ChiTaRs ChiTaRs MYH9-ATP6V0B MYH9 chr22 36678546 ATP6V0B chr1 44442470 Exonic hg19 NA BQ688351 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene p34.1 119625 ChimerSeq ChiTaRs ChiTaRs DHX35-ITCH DHX35 chr20 37597861 ITCH chr20 32957198 Exonic hg19 NA XX000013 Out-of-frame Intra-chr q11.23 q11.22 119626 ChimerSeq ChiTaRs ChiTaRs C17orf76-AS1-AFAP1L1 C17orf76-AS1 chr17 16345332 AFAP1L1 chr5 148721125 Exonic hg19 NA AA621591 Out-of-frame Inter-chr q32 Tumor suppressor gene 119627 ChimerSeq ChiTaRs ChiTaRs PPP6R2-SQSTM1 PPP6R2 chr22 50877126 SQSTM1 chr5 179250921 Exonic hg19 NA CF127724 Out-of-frame Inter-chr q13.33 q35.3 119628 ChimerSeq ChiTaRs ChiTaRs NAA60-AMD1 NAA60 chr16 3498540 AMD1 chr6 111213364 Exonic hg19 NA BI770432 5'UTR-5'UTR Inter-chr p13.3 q21 119629 ChimerSeq ChiTaRs ChiTaRs TSPAN31-DNASE1 TSPAN31 chr12 58142026 DNASE1 chr16 3703330 Exonic hg19 NA AA811975 3'UTR-5'UTR Inter-chr q14.1 p13.3 119630 ChimerSeq ChiTaRs ChiTaRs LINS-RQCD1 LINS chr15 101114499 RQCD1 chr2 219433669 Exonic hg19 NA BF513238 Out-of-frame Inter-chr 119631 ChimerSeq ChiTaRs ChiTaRs KIAA0195-KIF13A KIAA0195 chr17 73495376 KIF13A chr6 17760669 Exonic hg19 NA BQ428394 Out-of-frame Inter-chr p22.3 119632 ChimerSeq ChiTaRs ChiTaRs C15orf63-HLA-DQA1 C15orf63 chr15 44094077 HLA-DQA1 chr6 32609844 Exonic hg19 NA CA307230 Out-of-frame Inter-chr 119633 ChimerSeq ChiTaRs ChiTaRs PPDPF-CHD3 PPDPF chr20 62153141 CHD3 chr17 7804634 Exonic hg19 NA DC377192 Out-of-frame Inter-chr q13.33 p13.1 119634 ChimerSeq ChiTaRs ChiTaRs DDX6-RAB7A DDX6 chr11 118657228 RAB7A chr3 128533579 Exonic hg19 NA BC065007 Out-of-frame Inter-chr q23.3 q21.3 Tumor suppressor gene 119635 ChimerSeq ChiTaRs ChiTaRs BCL2L2-PABPN1-NFATC3 BCL2L2-PABPN1 chr14 23793869 NFATC3 chr16 68260351 Exonic hg19 NA BF895698 Out-of-frame Inter-chr q11.2 Oncogene q22.1 119636 ChimerSeq ChiTaRs ChiTaRs MBP-RGS2 MBP chr18 74725159 RGS2 chr1 192780233 Exonic hg19 NA CD558589 Out-of-frame Inter-chr q23 q31.2 119637 ChimerSeq ChiTaRs ChiTaRs LRTOMT-TOMM40 LRTOMT chr11 71808652 TOMM40 chr19 45404332 Exonic hg19 NA AW873110 Out-of-frame Inter-chr q13.4 q13.32 119638 ChimerSeq ChiTaRs ChiTaRs ANKFY1-STX4 ANKFY1 chr17 4163647 STX4 chr16 31045632 Exonic hg19 NA BG540772 Out-of-frame Inter-chr p13.2 p11.2 119639 ChimerSeq ChiTaRs ChiTaRs LOC100506713-GLRA2 LOC100506713 chr17 6915658 GLRA2 chrX 14622435 Exonic hg19 NA DA796552 Out-of-frame Inter-chr p22.2 119640 ChimerSeq ChiTaRs ChiTaRs ATXN2-USP9X ATXN2 chr12 111890313 USP9X chrX 41088503 Exonic hg19 NA BF448141 Out-of-frame Inter-chr q24.12 p11.4 Oncogene 119641 ChimerSeq ChiTaRs ChiTaRs KDM5A-MBP KDM5A chr12 498457 MBP chr18 74692366 Exonic hg19 NA DB177382 Out-of-frame Inter-chr p13.33 Tumor suppressor gene q23 119642 ChimerSeq ChiTaRs ChiTaRs ZNF329-SNRPN ZNF329 chr19 58666457 SNRPN chr15 25213077 Exonic hg19 NA CD512958 Out-of-frame Inter-chr q13.43 Transcription factor q11.2 119643 ChimerSeq ChiTaRs ChiTaRs ESCO1-MGRN1 ESCO1 chr18 19180639 MGRN1 chr16 4700364 Exonic hg19 NA BU161418 Out-of-frame Inter-chr q11.2 p13.3 119644 ChimerSeq ChiTaRs ChiTaRs C19orf25-KLF2 C19orf25 chr19 1479196 KLF2 chr19 16437665 Exonic hg19 NA AJ713185 Out-of-frame Intra-chr p13.3 p13.11 Transcription factor 119645 ChimerSeq ChiTaRs ChiTaRs SRCIN1-ARNT2 SRCIN1 chr17 36688653 ARNT2 chr15 80887005 Exonic hg19 NA DA768778 Out-of-frame Inter-chr q12 q25.1 Transcription factor 119646 ChimerSeq ChiTaRs ChiTaRs ZNFX1-AS1-TF ZNFX1-AS1 chr20 47896939 TF chr3 133465239 Exonic hg19 NA DA338823 Out-of-frame Inter-chr q22.1 Tumor suppressor gene 119647 ChimerSeq ChiTaRs ChiTaRs RPAIN-TRIP6 RPAIN chr17 5342381 TRIP6 chr7 100470919 Exonic hg19 NA M69039 Out-of-frame Inter-chr p13.2 q22.1 119648 ChimerSeq ChiTaRs ChiTaRs RARA-PKIA RARA chr17 38465538 PKIA chr8 79485043 Exonic hg19 NA XX000008 5'UTR-5'UTR Inter-chr q21.2 Oncogene Transcription factor q21.13 119649 ChimerSeq ChiTaRs ChiTaRs INPPL1-INPPL1 INPPL1 chr11 71946231 INPPL1 chr11 71946224 Exonic hg19 NA BE280713 Out-of-frame Intra-chr q13.4 q13.4 119650 ChimerSeq ChiTaRs ChiTaRs GPALPP1-PRKCQ GPALPP1 chr13 45563879 PRKCQ chr10 6506278 Exonic hg19 NA DB492326 Out-of-frame Inter-chr q14.12 p15.1 119651 ChimerSeq ChiTaRs ChiTaRs PSMC5-PSD3 PSMC5 chr17 61909376 PSD3 chr8 18725438 Exonic hg19 NA CK725100 Out-of-frame Inter-chr q23.3 p22 119652 ChimerSeq ChiTaRs ChiTaRs LYZ-RSAD2 LYZ chr12 69748014 RSAD2 chr2 7037528 Exonic hg19 NA CA437125 Out-of-frame Inter-chr q15 p25.2 119653 ChimerSeq ChiTaRs ChiTaRs DDX47-AIM1 DDX47 chr12 12982915 AIM1 chr6 107011692 Exonic hg19 NA CA446347 3'UTR-CDS Inter-chr p13.1 119654 ChimerSeq ChiTaRs ChiTaRs RAB1B-SETD6 RAB1B chr11 66039720 SETD6 chr16 58550511 Exonic hg19 NA BP379219 Out-of-frame Inter-chr q13.2 q21 119655 ChimerSeq ChiTaRs ChiTaRs GAS8-CEP85L GAS8 chr16 90102815 CEP85L chr6 118879994 Exonic hg19 NA N86717 Out-of-frame Inter-chr q24.3 q22.31 119656 ChimerSeq ChiTaRs ChiTaRs TIMM21-PTPLAD1 TIMM21 chr18 71815824 PTPLAD1 chr15 65849075 Exonic hg19 NA DA739163 Out-of-frame Inter-chr q22.3 119657 ChimerSeq ChiTaRs ChiTaRs FGD4-TTC39B FGD4 chr12 32655272 TTC39B chr9 15211315 Exonic hg19 NA DB443222 5'UTR-CDS Inter-chr p11.21 p22.3 119658 ChimerSeq ChiTaRs ChiTaRs KRT12-LSP1 KRT12 chr17 39023366 LSP1 chr11 1902753 Exonic hg19 NA CV571702 Out-of-frame Inter-chr q21.2 p15.5 119659 ChimerSeq ChiTaRs ChiTaRs PPP1R15A-ATP1A1 PPP1R15A chr19 49377085 ATP1A1 chr1 116933006 Exonic hg19 NA CN305317 Out-of-frame Inter-chr q13.33 p13.1 119660 ChimerSeq ChiTaRs ChiTaRs KXD1-MYH7 KXD1 chr19 18675784 MYH7 chr14 23883064 Exonic hg19 NA N80879 Out-of-frame Inter-chr p13.11 q11.2 119661 ChimerSeq ChiTaRs ChiTaRs HSPA8-HSPA8 HSPA8 chr11 122929465 HSPA8 chr11 122928553 Exonic hg19 NA BE812526 Out-of-frame Intra-chr q24.1 q24.1 119662 ChimerSeq ChiTaRs ChiTaRs PI4KA-GBP3 PI4KA chr22 21161747 GBP3 chr1 89477432 Exonic hg19 NA BE006728 Out-of-frame Inter-chr q11.21 p22.2 119663 ChimerSeq ChiTaRs ChiTaRs USP3-SOD1 USP3 chr15 63883247 SOD1 chr21 33032096 Exonic hg19 NA AA171920 Out-of-frame Inter-chr q22.31 q22.11 119664 ChimerSeq ChiTaRs ChiTaRs GALNT1-NFX1 GALNT1 chr18 33271068 NFX1 chr9 33348276 Exonic hg19 NA BG289433 Out-of-frame Inter-chr q12.2 p13.3 Transcription factor 119665 ChimerSeq ChiTaRs ChiTaRs ROBO3-SCARB1 ROBO3 chr11 124751356 SCARB1 chr12 125262885 Exonic hg19 NA AI123607 Out-of-frame Inter-chr q24.2 q24.31 119666 ChimerSeq ChiTaRs ChiTaRs RPL38-SNX3 RPL38 chr17 72199886 SNX3 chr6 108532890 Exonic hg19 NA BF696633 Out-of-frame Inter-chr q25.1 q21 119667 ChimerSeq ChiTaRs ChiTaRs CD3G-TRIM10 CD3G chr11 118224002 TRIM10 chr6 1450352 Exonic hg19 NA R93335 Out-of-frame Inter-chr q23.3 119668 ChimerSeq ChiTaRs ChiTaRs NAE1-ENO2 NAE1 chr16 66850908 ENO2 chr12 7023722 Exonic hg19 NA AU142951 Out-of-frame Inter-chr q22.1 p13.31 119669 ChimerSeq ChiTaRs ChiTaRs CHAC1-C16orf72 CHAC1 chr15 41248361 C16orf72 chr16 9204863 Exonic hg19 NA AA374390 Out-of-frame Inter-chr q15.1 p13.2 119670 ChimerSeq ChiTaRs ChiTaRs KPNA2-WBP5 KPNA2 chr17 66033492 WBP5 chrX 102612644 Exonic hg19 NA BC007006 Out-of-frame Inter-chr q24.2 119671 ChimerSeq ChiTaRs ChiTaRs CD9-NBPF14 CD9 chr12 6344678 NBPF14 chr1 145282559 Exonic hg19 NA AW864459 Out-of-frame Inter-chr p13.31 q21.2 119672 ChimerSeq ChiTaRs ChiTaRs SLC4A8-LMBRD1 SLC4A8 chr12 51904007 LMBRD1 chr6 70385749 Exonic hg19 NA BC047623 Out-of-frame Inter-chr q13.13 q13 119673 ChimerSeq ChiTaRs ChiTaRs NACA-HLA-B NACA chr12 57106694 HLA-B chr6 2834404 Exonic hg19 NA AA582849 Out-of-frame Inter-chr q13.3 119674 ChimerSeq ChiTaRs ChiTaRs SYN3-ERVW-1 SYN3 chr22 33256851 ERVW-1 chr7 92099036 Exonic hg19 NA BQ366047 Out-of-frame Inter-chr q12.3 q21.2 119675 ChimerSeq ChiTaRs ChiTaRs IL4I1-CSTB IL4I1 chr19 50432525 CSTB chr21 45193832 Exonic hg19 NA BU534964 Out-of-frame Inter-chr q13.33 q22.3 119676 ChimerSeq ChiTaRs ChiTaRs HSP90AA1-DHX38 HSP90AA1 chr14 102552416 DHX38 chr16 72139506 Exonic hg19 NA BP241442 Out-of-frame Inter-chr q32.31 Oncogene q22.2 119677 ChimerSeq ChiTaRs ChiTaRs EIF5A-ADAR EIF5A chr17 7215633 ADAR chr1 154555010 Exonic hg19 NA BM720324 Out-of-frame Inter-chr p13.1 q21.3 119678 ChimerSeq ChiTaRs ChiTaRs APEX1-GBF1 APEX1 chr14 20924123 GBF1 chr10 104136765 Exonic hg19 NA BF806154 Out-of-frame Inter-chr q11.2 Oncogene q24.32 119679 ChimerSeq ChiTaRs ChiTaRs PGM2L1-TTTY14 PGM2L1 chr11 74046863 TTTY14 chrY 21153076 Exonic hg19 NA BF038662 Out-of-frame Inter-chr q13.4 q11.222 119680 ChimerSeq ChiTaRs ChiTaRs DDX24-MEG3 DDX24 chr14 94547554 MEG3 chr14 101321233 Exonic hg19 NA BP349452 Out-of-frame Intra-chr q32.2 Tumor suppressor gene 119681 ChimerSeq ChiTaRs ChiTaRs YWHAB-GJA1 YWHAB chr20 43535161 GJA1 chr6 121756829 Exonic hg19 NA DB142934 Out-of-frame Inter-chr q13.12 q22.31 Tumor suppressor gene 119682 ChimerSeq ChiTaRs ChiTaRs LOC100499227-OAZ2 LOC100499227 chr11 119289085 OAZ2 chr15 64980835 Exonic hg19 NA AI090341 Out-of-frame Inter-chr q22.31 119683 ChimerSeq ChiTaRs ChiTaRs TMEM161A-ADCK4 TMEM161A chr19 19245696 ADCK4 chr19 41197434 Exonic hg19 NA BC016478 CDS-3'UTR Intra-chr p13.11 Atypical:ABC1 119684 ChimerSeq ChiTaRs ChiTaRs CFL1-TXNDC5 CFL1 chr11 65625651 TXNDC5 chr6 7883387 Exonic hg19 NA BP358611 Out-of-frame Inter-chr q13.1 p24.3 119685 ChimerSeq ChiTaRs ChiTaRs PIGW-POMGNT1 PIGW chr17 34895268 POMGNT1 chr1 46656022 Exonic hg19 NA AI376808 Out-of-frame Inter-chr q12 p34.1 119686 ChimerSeq ChiTaRs ChiTaRs MALAT1-RPL13 MALAT1 chr11 65268002 RPL13 chr16 89629402 Exonic hg19 NA CR748210 Out-of-frame Inter-chr q13.1 q24.3 119687 ChimerSeq ChiTaRs ChiTaRs SKA2-MYO19 SKA2 chr17 57232623 MYO19 chr17 34863687 Exonic hg19 NA XX000019 Out-of-frame Intra-chr q22 q12 119688 ChimerSeq ChiTaRs ChiTaRs NECAP1-ETS1 NECAP1 chr12 8250362 ETS1 chr11 128331193 Exonic hg19 NA AA621984 Out-of-frame Inter-chr p13.31 q24.3 Oncogene Transcription factor 119689 ChimerSeq ChiTaRs ChiTaRs SLC38A7-AXL SLC38A7 chr16 58718085 AXL chr19 41766248 Exonic hg19 NA BX477897 Out-of-frame Inter-chr q21 q13.2 TK:Axl Oncogene 119690 ChimerSeq ChiTaRs ChiTaRs LACRT-PINK1 LACRT chr12 55028645 PINK1 chr1 20964531 Exonic hg19 NA CD723935 Out-of-frame Inter-chr q13.2 p36.12 Other:NKF2 119691 ChimerSeq ChiTaRs ChiTaRs NPIPB7-RPS9 NPIPB7 chr16 28857600 RPS9 chr19 54705436 Exonic hg19 NA BQ063558 Out-of-frame Inter-chr p12.1 119692 ChimerSeq ChiTaRs ChiTaRs METTL2A-IRGQ METTL2A chr17 60526302 IRGQ chr19 44092477 Exonic hg19 NA AW410195 Out-of-frame Inter-chr q23.2 q13.31 119693 ChimerSeq ChiTaRs ChiTaRs PSMD3-PRELID1 PSMD3 chr17 38151531 PRELID1 chr5 176730830 Exonic hg19 NA BC001684 Out-of-frame Inter-chr q21.1 q35.3 119694 ChimerSeq ChiTaRs ChiTaRs RPL28-ZNF804B RPL28 chr19 55899746 ZNF804B chr7 88482050 Exonic hg19 NA BG748632 Out-of-frame Inter-chr q13.42 q21.13 Transcription factor 119695 ChimerSeq ChiTaRs ChiTaRs TAB1-MSL2 TAB1 chr22 39811148 MSL2 chr3 135871282 Exonic hg19 NA DA448973 Out-of-frame Inter-chr q13.1 q22.3 119696 ChimerSeq ChiTaRs ChiTaRs ANKRD27-DHRS11 ANKRD27 chr19 33140699 DHRS11 chr17 34951396 Exonic hg19 NA BM042250 Out-of-frame Inter-chr q13.11 119697 ChimerSeq ChiTaRs ChiTaRs RRBP1-RUFY1 RRBP1 chr20 17662763 RUFY1 chr5 178977829 Exonic hg19 NA BC046249 Out-of-frame Inter-chr p12.1 119698 ChimerSeq ChiTaRs ChiTaRs MBP-ALMS1 MBP chr18 74691133 ALMS1 chr2 73823342 Exonic hg19 NA AV723294 Out-of-frame Inter-chr q23 p13.1 119699 ChimerSeq ChiTaRs ChiTaRs RPL13-PTRF RPL13 chr16 89627908 PTRF chr17 40574800 Exonic hg19 NA DB270526 Out-of-frame Inter-chr q24.3 119700 ChimerSeq ChiTaRs ChiTaRs SLC15A4-ARID1A SLC15A4 chr12 129285529 ARID1A chr1 27057880 Exonic hg19 NA DB203290 Out-of-frame Inter-chr q24.33 p36.11 Oncogene Tumor suppressor gene 119701 ChimerSeq ChiTaRs ChiTaRs GAPDH-AHNAK GAPDH chr12 6647537 AHNAK chr11 62284554 Exonic hg19 NA BQ019603 3'UTR-CDS Inter-chr p13.31 q12.3 Tumor suppressor gene 119702 ChimerSeq ChiTaRs ChiTaRs SIK2-ATXN1 SIK2 chr11 111594363 ATXN1 chr6 16545102 Exonic hg19 NA BI009934 Out-of-frame Inter-chr q23.1 p22.3 119703 ChimerSeq ChiTaRs ChiTaRs HEATR5A-SCFD1 HEATR5A chr14 31926629 SCFD1 chr14 31108982 Exonic hg19 NA DA686614 5'UTR-5'UTR Intra-chr q12 q12 119704 ChimerSeq ChiTaRs ChiTaRs PFAS-RNF141 PFAS chr17 8172675 RNF141 chr11 10533870 Exonic hg19 NA AK292402 Out-of-frame Inter-chr p13.1 p15.4 119705 ChimerSeq ChiTaRs ChiTaRs ZBED4-SLC4A5 ZBED4 chr22 50277430 SLC4A5 chr2 74588419 Exonic hg19 NA AK311081 Out-of-frame Inter-chr q13.33 Transcription factor p13.1 119706 ChimerSeq ChiTaRs ChiTaRs PTTG1IP-NCOA6 PTTG1IP chr21 46270910 NCOA6 chr20 33345774 Exonic hg19 NA AL706432 Out-of-frame Inter-chr q22.3 q11.22 119707 ChimerSeq ChiTaRs ChiTaRs ATP6V0D1-RPS7 ATP6V0D1 chr16 67515062 RPS7 chr2 3623414 Exonic hg19 NA BP272543 Out-of-frame Inter-chr q22.1 p25.3 119708 ChimerSeq ChiTaRs ChiTaRs TM9SF4-TUBA4A TM9SF4 chr20 30729350 TUBA4A chr2 220116326 Exonic hg19 NA DA812020 Out-of-frame Inter-chr q11.21 q35 119709 ChimerSeq ChiTaRs ChiTaRs EXOSC6-LDLR EXOSC6 chr16 70284296 LDLR chr19 11241959 Exonic hg19 NA BU631838 Out-of-frame Inter-chr q22.1 p13.2 119710 ChimerSeq ChiTaRs ChiTaRs USP15-UBR4 USP15 chr12 62783768 UBR4 chr1 19479893 Exonic hg19 NA BQ320184 Out-of-frame Inter-chr q14.1 p36.13 119711 ChimerSeq ChiTaRs ChiTaRs RBL2-RNF24 RBL2 chr16 53504467 RNF24 chr20 3913982 Exonic hg19 NA BP430628 Out-of-frame Inter-chr q12.2 Tumor suppressor gene p13 119712 ChimerSeq ChiTaRs ChiTaRs BRWD1-APOL1 BRWD1 chr21 40558506 APOL1 chr22 36661686 Exonic hg19 NA BF900659 Out-of-frame Inter-chr q22.2 q12.3 119713 ChimerSeq ChiTaRs ChiTaRs MALAT1-MUC7 MALAT1 chr11 65266893 MUC7 chr4 71339738 Exonic hg19 NA BX487700 Out-of-frame Inter-chr q13.1 q13.3 119714 ChimerSeq ChiTaRs ChiTaRs MBP-OSBPL1A MBP chr18 74729055 OSBPL1A chr18 21805031 Exonic hg19 NA DA198061 5'UTR-CDS Intra-chr q23 q11.2 119715 ChimerSeq ChiTaRs ChiTaRs ACTN1-SERPINE1 ACTN1 chr14 69445884 SERPINE1 chr7 100782273 Exonic hg19 NA M95178 Out-of-frame Inter-chr q24.1 q22.1 119716 ChimerSeq ChiTaRs ChiTaRs VASH1-PRKCH VASH1 chr14 77229474 PRKCH chr14 61952218 Exonic hg19 NA DA951876 Out-of-frame Intra-chr q24.3 q23.1 119717 ChimerSeq ChiTaRs ChiTaRs OGFR-KLHL17 OGFR chr20 61439670 KLHL17 chr1 897600 Exonic hg19 NA DA497127 Out-of-frame Inter-chr q13.33 p36.33 119718 ChimerSeq ChiTaRs ChiTaRs DAZAP1-MAD1L1 DAZAP1 chr19 1407802 MAD1L1 chr7 1855509 Exonic hg19 NA CD049770 Out-of-frame Inter-chr p13.3 p22.3 Tumor suppressor gene 119719 ChimerSeq ChiTaRs ChiTaRs MYL6-HMHA1 MYL6 chr12 56554454 HMHA1 chr19 1086433 Exonic hg19 NA AW257801 3'UTR-3'UTR Inter-chr q13.2 119720 ChimerSeq ChiTaRs ChiTaRs PTPN9-BUB3 PTPN9 chr15 75816642 BUB3 chr10 124924563 Exonic hg19 NA BG220202 Out-of-frame Inter-chr q24.2 q26.13 119721 ChimerSeq ChiTaRs ChiTaRs ARHGAP8-ACLY ARHGAP8 chr22 45255667 ACLY chr17 40052731 Exonic hg19 NA BE840542 Out-of-frame Inter-chr q13.31 q21.2 119722 ChimerSeq ChiTaRs ChiTaRs FAM65A-ADCY2 FAM65A chr16 67576690 ADCY2 chr1 152004983 Exonic hg19 NA BM015985 Out-of-frame Inter-chr p15.31 119723 ChimerSeq ChiTaRs ChiTaRs PSTPIP2-ARID4A PSTPIP2 chr18 43571948 ARID4A chr14 58833654 Exonic hg19 NA BI024708 Out-of-frame Inter-chr q21.1 q23.1 119724 ChimerSeq ChiTaRs ChiTaRs FAM182A-LOC100507412 FAM182A chr20 26063584 LOC100507412 chr? 109450 Exonic hg19 NA BQ447386 Out-of-frame Inter-chr p11.1 119725 ChimerSeq ChiTaRs ChiTaRs FKBP8-PRSS23 FKBP8 chr19 18652641 PRSS23 chr11 86518710 Exonic hg19 NA BQ421142 Out-of-frame Inter-chr p13.11 q14.2 119726 ChimerSeq ChiTaRs ChiTaRs EIF3CL-SETD3 EIF3CL chr16 28399998 SETD3 chr14 99925449 Exonic hg19 NA BQ221463 5'UTR-CDS Inter-chr p12.1 q32.2 119727 ChimerSeq ChiTaRs ChiTaRs TM9SF4-NKTR TM9SF4 chr20 30734652 NKTR chr3 42687441 Exonic hg19 NA AK302439 Out-of-frame Inter-chr q11.21 p22.1 119728 ChimerSeq ChiTaRs ChiTaRs SLC36A4-CSH1 SLC36A4 chr11 92900696 CSH1 chr17 61972276 Exonic hg19 NA AK096714 Out-of-frame Inter-chr q21 q23.3 119729 ChimerSeq ChiTaRs ChiTaRs CYB5D2-HSPA5 CYB5D2 chr17 4060991 HSPA5 chr9 128000443 Exonic hg19 NA AI191499 3'UTR-CDS Inter-chr p13.2 q33.3 119730 ChimerSeq ChiTaRs ChiTaRs ATP8B4-PWRN1 ATP8B4 chr15 50169369 PWRN1 chr15 24778839 Exonic hg19 NA AK058147 Out-of-frame Intra-chr q21.2 q11.2 119731 ChimerSeq ChiTaRs ChiTaRs DYNC1H1-CAST DYNC1H1 chr14 102466438 CAST chr5 96086345 Exonic hg19 NA DW419036 Out-of-frame Inter-chr q32.31 q15 119732 ChimerSeq ChiTaRs ChiTaRs PIK3R5-RNF135 PIK3R5 chr17 8869005 RNF135 chr17 29311633 Exonic hg19 NA CT002985 Out-of-frame Intra-chr p13.1 q11.2 119733 ChimerSeq ChiTaRs ChiTaRs KLF5-TMC4 KLF5 chr13 73649913 TMC4 chr19 54663871 Exonic hg19 NA CN418033 Out-of-frame Inter-chr q22.1 Tumor suppressor gene Transcription factor 119734 ChimerSeq ChiTaRs ChiTaRs RPS6KA5-DDX24 RPS6KA5 chr14 91526948 DDX24 chr14 94528445 Exonic hg19 NA BQ063739 Out-of-frame Intra-chr q32.11 119735 ChimerSeq ChiTaRs ChiTaRs MRPL51-SPTLC1 MRPL51 chr12 6602426 SPTLC1 chr9 94794734 Exonic hg19 NA AK309775 Out-of-frame Inter-chr p13.31 q22.31 119736 ChimerSeq ChiTaRs ChiTaRs MAPKBP1-STX6 MAPKBP1 chr15 42066809 STX6 chr1 180953845 Exonic hg19 NA DA324569 Out-of-frame Inter-chr q15.1 q25.3 119737 ChimerSeq ChiTaRs ChiTaRs PTPN2-BOLA2 PTPN2 chr18 12884170 BOLA2 chr16 30002608 Exonic hg19 NA BU580997 Out-of-frame Inter-chr p11.21 Tumor suppressor gene p11.2 119738 ChimerSeq ChiTaRs ChiTaRs SLCO1A2-PPY SLCO1A2 chr12 21532605 PPY chr17 42018174 Exonic hg19 NA BP386860 Out-of-frame Inter-chr p12.1 q21.31 119739 ChimerSeq ChiTaRs ChiTaRs CYP19A1-CPM CYP19A1 chr15 51504679 CPM chr12 69246107 Exonic hg19 NA BQ367522 Out-of-frame Inter-chr q21.2 q15 119740 ChimerSeq ChiTaRs ChiTaRs CSAD-UQCRQ CSAD chr12 53582457 UQCRQ chr5 132203325 Exonic hg19 NA BC053557 Out-of-frame Inter-chr q13.13 q31.1 119741 ChimerSeq ChiTaRs ChiTaRs ARGLU1-NAPG ARGLU1 chr13 107209637 NAPG chr18 10530801 Exonic hg19 NA BE930315 Out-of-frame Inter-chr q33.3 p11.22 119742 ChimerSeq ChiTaRs ChiTaRs NFIX-RBM5 NFIX chr19 13206543 RBM5 chr3 50141679 Exonic hg19 NA DB028954 Out-of-frame Inter-chr p13.13 Transcription factor p21.31 Tumor suppressor gene 119743 ChimerSeq ChiTaRs ChiTaRs EXPH5-UBE2V1 EXPH5 chr11 108464364 UBE2V1 chr20 48712728 Exonic hg19 NA CF995065 Out-of-frame Inter-chr q22.3 q13.13 119744 ChimerSeq ChiTaRs ChiTaRs TMTC4-LPHN3 TMTC4 chr13 101318786 LPHN3 chr4 62067375 Exonic hg19 NA AF307080 Out-of-frame Inter-chr q32.3 119745 ChimerSeq ChiTaRs ChiTaRs SEC11A-NFIA SEC11A chr15 85224868 NFIA chr1 61724196 Exonic hg19 NA AI954648 Out-of-frame Inter-chr q25.3 p31.3 Transcription factor 119746 ChimerSeq ChiTaRs ChiTaRs HN1L-SERPINH1 HN1L chr16 1749315 SERPINH1 chr11 75282935 Exonic hg19 NA BI044399 Out-of-frame Inter-chr q13.5 119747 ChimerSeq ChiTaRs ChiTaRs MALAT1-TPP1 MALAT1 chr11 65266714 TPP1 chr11 6638897 Exonic hg19 NA DA868262 Out-of-frame Intra-chr q13.1 p15.4 119748 ChimerSeq ChiTaRs ChiTaRs CCL4-PRPF38A CCL4 chr17 34432864 PRPF38A chr1 52882577 Exonic hg19 NA CD641082 Out-of-frame Inter-chr q12 p32.3 119749 ChimerSeq ChiTaRs ChiTaRs LSM14A-PAG1 LSM14A chr19 34718853 PAG1 chr8 81885112 Exonic hg19 NA BM722211 Out-of-frame Inter-chr q21.13 119750 ChimerSeq ChiTaRs ChiTaRs P4HB-UBE2E3 P4HB chr17 79801616 UBE2E3 chr2 181846811 Exonic hg19 NA BP290873 Out-of-frame Inter-chr q25.3 q31.3 119751 ChimerSeq ChiTaRs ChiTaRs APOPT1-MOB3A APOPT1 chr14 104056927 MOB3A chr19 2072464 Exonic hg19 NA AV705905 Out-of-frame Inter-chr q32.33 p13.3 119752 ChimerSeq ChiTaRs ChiTaRs HAUS1-NEDD4L HAUS1 chr18 43685340 NEDD4L chr18 55833018 Exonic hg19 NA AY243320 Out-of-frame Intra-chr q21.1 q21.31 Tumor suppressor gene KB 119753 ChimerSeq ChiTaRs ChiTaRs PPP6R1-ZGLP1 PPP6R1 chr19 55769840 ZGLP1 chr19 10415780 Exonic hg19 NA BM771939 Out-of-frame Intra-chr q13.42 p13.2 Transcription factor 119754 ChimerSeq ChiTaRs ChiTaRs MYZAP-CCDC19 MYZAP chr15 57921940 CCDC19 chr1 159846487 Exonic hg19 NA BF812046 Out-of-frame Inter-chr q21.3 119755 ChimerSeq ChiTaRs ChiTaRs MIR5095-CARS MIR5095 chr20 55984389 CARS chr11 3022234 Exonic hg19 NA AI673033 Out-of-frame Inter-chr p32.3 119756 ChimerSeq ChiTaRs ChiTaRs GATSL3-SPTAN1 GATSL3 chr22 30681181 SPTAN1 chr9 131388045 Exonic hg19 NA BM681002 Out-of-frame Inter-chr q34.11 119757 ChimerSeq ChiTaRs ChiTaRs NFKBID-NXF1 NFKBID chr19 36390642 NXF1 chr11 62567362 Exonic hg19 NA DB136765 Out-of-frame Inter-chr q13.12 q12.3 119758 ChimerSeq ChiTaRs ChiTaRs NPIPB7-USP20 NPIPB7 chr16 28548776 USP20 chr9 132631219 Exonic hg19 NA AW170403 Out-of-frame Inter-chr p12.1 q34.11 119759 ChimerSeq ChiTaRs ChiTaRs PLBD2-RAB11FIP4 PLBD2 chr12 113827201 RAB11FIP4 chr17 29864990 Exonic hg19 NA AW182776 Out-of-frame Inter-chr q24.13 q11.2 119760 ChimerSeq ChiTaRs ChiTaRs TBC1D2B-YIPF1 TBC1D2B chr15 78317639 YIPF1 chr1 54325787 Exonic hg19 NA BM047092 Out-of-frame Inter-chr q25.1 p32.3 119761 ChimerSeq ChiTaRs ChiTaRs ADAM10-RER1 ADAM10 chr15 59041937 RER1 chr1 2327221 Exonic hg19 NA BF033257 Out-of-frame Inter-chr q21.3 p36.32 119762 ChimerSeq ChiTaRs ChiTaRs POSTN-NCAM1 POSTN chr13 38148363 NCAM1 chr11 113078662 Exonic hg19 NA DA360025 Out-of-frame Inter-chr q13.3 q23.2 119763 ChimerSeq ChiTaRs ChiTaRs PLD6-IFNAR1 PLD6 chr17 17124925 IFNAR1 chr21 34728286 Exonic hg19 NA BC015725 Out-of-frame Inter-chr p11.2 q22.11 119764 ChimerSeq ChiTaRs ChiTaRs ZNF814-TNRC6A ZNF814 chr19 58379743 TNRC6A chr16 24828236 Exonic hg19 NA BF922727 Out-of-frame Inter-chr q13.43 Transcription factor p12.1 119765 ChimerSeq ChiTaRs ChiTaRs FBRS-C5orf56 FBRS chr16 30681828 C5orf56 chr5 131819381 Exonic hg19 NA BI010451 Out-of-frame Inter-chr p11.2 q31.1 119766 ChimerSeq ChiTaRs ChiTaRs SLC16A3-RNF213 SLC16A3 chr17 80186983 RNF213 chr17 78237458 Exonic hg19 NA AA373754 Out-of-frame Intra-chr q25.3 q25.3 Oncogene 119767 ChimerSeq ChiTaRs ChiTaRs SBSN-GSPT2 SBSN chr19 36015640 GSPT2 chrX 51487145 Exonic hg19 NA BQ008176 Out-of-frame Inter-chr q13.12 p11.22 119768 ChimerSeq ChiTaRs ChiTaRs PHB2-FHL1 PHB2 chr12 7079891 FHL1 chrX 135290092 Exonic hg19 NA DA822142 5'UTR-5'UTR Inter-chr p13.31 q26.3 Tumor suppressor gene 119769 ChimerSeq ChiTaRs ChiTaRs SLC23A2-NDUFS2 SLC23A2 chr20 4835122 NDUFS2 chr1 161184136 Exonic hg19 NA BM708210 Out-of-frame Inter-chr p13 q23.3 119770 ChimerSeq ChiTaRs ChiTaRs FUS-NMNAT2 FUS chr16 31195568 NMNAT2 chr1 183218278 Exonic hg19 NA CN288204 Out-of-frame Inter-chr p11.2 Tumor suppressor gene q25.3 119771 ChimerSeq ChiTaRs ChiTaRs ATP5A1-MYL12A ATP5A1 chr18 43678247 MYL12A chr18 3252279 Exonic hg19 NA BP259811 Out-of-frame Intra-chr q21.1 p11.31 119772 ChimerSeq ChiTaRs ChiTaRs SMARCD1-ATP2C2 SMARCD1 chr12 50484310 ATP2C2 chr16 84456272 Exonic hg19 NA AW389291 Out-of-frame Inter-chr q13.12 q24.1 119773 ChimerSeq ChiTaRs ChiTaRs SNORD104-DIDO1 SNORD104 chr17 62223512 DIDO1 chr20 61525474 Exonic hg19 NA DA299121 Out-of-frame Inter-chr q23.3 q13.33 Tumor suppressor gene 119774 ChimerSeq ChiTaRs ChiTaRs ECH1-ECH1 ECH1 chr19 39306170 ECH1 chr19 39306325 Exonic hg19 NA BF911169 Out-of-frame Intra-chr 119775 ChimerSeq ChiTaRs ChiTaRs APOE-HMGA1 APOE chr19 45411169 HMGA1 chr6 34210504 Exonic hg19 NA AK130027 Out-of-frame Inter-chr q13.32 p21.31 Transcription factor 119776 ChimerSeq ChiTaRs ChiTaRs HSD11B2-SLC39A1 HSD11B2 chr16 67465408 SLC39A1 chr1 153933103 Exonic hg19 NA CB989158 Out-of-frame Inter-chr q22.1 q21.3 Tumor suppressor gene 119777 ChimerSeq ChiTaRs ChiTaRs ANKRD10-PAQR4 ANKRD10 chr13 111567342 PAQR4 chr16 3022792 Exonic hg19 NA BC011843 Out-of-frame Inter-chr q34 p13.3 119778 ChimerSeq ChiTaRs ChiTaRs IST1-ACAP2 IST1 chr16 71962153 ACAP2 chr3 195063206 Exonic hg19 NA DB096091 Out-of-frame Inter-chr q22.2 q29 119779 ChimerSeq ChiTaRs ChiTaRs PRR4-ULK1 PRR4 chr12 11002069 ULK1 chr12 132403871 Exonic hg19 NA DB222914 Out-of-frame Intra-chr q24.33 Other:ULK 119780 ChimerSeq ChiTaRs ChiTaRs RPL3-SOX8 RPL3 chr22 39711526 SOX8 chr16 1036443 Exonic hg19 NA AA242792 Out-of-frame Inter-chr q13.1 p13.3 Transcription factor 119781 ChimerSeq ChiTaRs ChiTaRs RPL38-RPL3 RPL38 chr17 72206019 RPL3 chr22 39710181 Exonic hg19 NA CD368190 3'UTR-CDS Inter-chr q25.1 q13.1 119782 ChimerSeq ChiTaRs ChiTaRs DONSON-TGFB1 DONSON chr21 35284665 TGFB1 chr19 41854326 Exonic hg19 NA CD368725 Out-of-frame Inter-chr q22.11 q13.2 Tumor suppressor gene 119783 ChimerSeq ChiTaRs ChiTaRs PLCG1-FRMD8 PLCG1 chr20 39804359 FRMD8 chr11 65164272 Exonic hg19 NA CK724856 Out-of-frame Inter-chr q12 Oncogene q13.1 119784 ChimerSeq ChiTaRs ChiTaRs RPL38-TRMT5 RPL38 chr17 72206019 TRMT5 chr14 61442204 Exonic hg19 NA CA432338 3'UTR-CDS Inter-chr q25.1 q23.1 119785 ChimerSeq ChiTaRs ChiTaRs CHD4-ZBTB40 CHD4 chr12 6697081 ZBTB40 chr1 22854741 Exonic hg19 NA BF811359 Out-of-frame Inter-chr p13.31 p36.12 Transcription factor 119786 ChimerSeq ChiTaRs ChiTaRs APOA1-DRAP1 APOA1 chr11 116708338 DRAP1 chr11 65686958 Exonic hg19 NA BJ995037 5'UTR-5'UTR Intra-chr q23.3 q13.1 Transcription factor 119787 ChimerSeq ChiTaRs ChiTaRs CARD10-CAMK2N1 CARD10 chr22 37904644 CAMK2N1 chr1 20809700 Exonic hg19 NA AA316883 Out-of-frame Inter-chr q13.1 p36.12 Tumor suppressor gene 119788 ChimerSeq ChiTaRs ChiTaRs TRPC6-HLA-B TRPC6 chr11 101412260 HLA-B chr6 31323955 Exonic hg19 NA DA646697 Out-of-frame Inter-chr q22.1 119789 ChimerSeq ChiTaRs ChiTaRs ARAP1-SDCCAG3 ARAP1 chr11 72468856 SDCCAG3 chr9 139296374 Exonic hg19 NA BG681298 Out-of-frame Inter-chr q13.4 q34.3 119790 ChimerSeq ChiTaRs ChiTaRs MRPL52-MOB2 MRPL52 chr14 23303645 MOB2 chr11 1778597 Exonic hg19 NA AA933040 Out-of-frame Inter-chr q11.2 p15.5 119791 ChimerSeq ChiTaRs ChiTaRs TBC1D2B-YIPF1 TBC1D2B chr15 78317638 YIPF1 chr1 54317746 Exonic hg19 NA BQ937210 Out-of-frame Inter-chr q25.1 p32.3 119792 ChimerSeq ChiTaRs ChiTaRs NACA-TUBB2B NACA chr12 57112717 TUBB2B chr6 3225938 Exonic hg19 NA AW498865 Out-of-frame Inter-chr q13.3 p25.2 119793 ChimerSeq ChiTaRs ChiTaRs PSME2-SNAP91 PSME2 chr14 24614642 SNAP91 chr6 84312558 Exonic hg19 NA BF884903 Out-of-frame Inter-chr q12 q14.2 119794 ChimerSeq ChiTaRs ChiTaRs LTBP2-CYB561 LTBP2 chr14 74976836 CYB561 chr17 61509667 Exonic hg19 NA BX648452 Out-of-frame Inter-chr q24.3 q23.3 119795 ChimerSeq ChiTaRs ChiTaRs CYBA-ELOVL5 CYBA chr16 88714522 ELOVL5 chr6 53156583 Exonic hg19 NA BM827569 In-Frame Inter-chr q24.2 p12.1 119796 ChimerSeq ChiTaRs ChiTaRs PPP6R1-ZGLP1 PPP6R1 chr19 55769840 ZGLP1 chr19 10415873 Exonic hg19 NA BM770116 Out-of-frame Intra-chr q13.42 p13.2 Transcription factor 119797 ChimerSeq ChiTaRs ChiTaRs E2F7-MDC1 E2F7 chr12 77419658 MDC1 chr6 2005256 Exonic hg19 NA CV340093 Out-of-frame Inter-chr q21.2 Transcription factor Tumor suppressor gene 119798 ChimerSeq ChiTaRs ChiTaRs DNAJA4-FOXK2 DNAJA4 chr15 78572693 FOXK2 chr17 80478124 Exonic hg19 NA X60787 Out-of-frame Inter-chr q25.1 q25.3 Transcription factor 119799 ChimerSeq ChiTaRs ChiTaRs BRCA1-NFYB BRCA1 chr17 41277789 NFYB chr12 104515074 Exonic hg19 NA BG427715 Out-of-frame Inter-chr q21.31 Oncogene Tumor suppressor gene q23.3 Transcription factor 119800 ChimerSeq ChiTaRs ChiTaRs KDM5A-MBP KDM5A chr12 498457 MBP chr18 74692360 Exonic hg19 NA DB177419 Out-of-frame Inter-chr p13.33 Tumor suppressor gene q23 119801 ChimerSeq ChiTaRs ChiTaRs IRF3-SF3A2 IRF3 chr19 50169049 SF3A2 chr19 2248149 Exonic hg19 NA CR989887 Out-of-frame Intra-chr q13.33 Tumor suppressor gene Transcription factor p13.3 119802 ChimerSeq ChiTaRs ChiTaRs MYL2-SNRPN MYL2 chr12 111348778 SNRPN chr15 25333558 Exonic hg19 NA AI453127 Out-of-frame Inter-chr q24.11 q11.2 119803 ChimerSeq ChiTaRs ChiTaRs LINC00478-LTBP1 LINC00478 chr21 17979457 LTBP1 chr2 33526630 Exonic hg19 NA BM676373 Out-of-frame Inter-chr p22.3 119804 ChimerSeq ChiTaRs ChiTaRs FUS-MARS FUS chr16 31195717 MARS chr12 57911164 Exonic hg19 NA S75763 CDS-3'UTR Inter-chr p11.2 Tumor suppressor gene q13.3 119805 ChimerSeq ChiTaRs ChiTaRs KRAS-KIAA0907 KRAS chr12 25360242 KIAA0907 chr1 155887427 Exonic hg19 NA BU632342 Out-of-frame Inter-chr p12.1 Oncogene q22 119806 ChimerSeq ChiTaRs ChiTaRs ARL17A-AMZ2P1 ARL17A chr17 492951 AMZ2P1 chr17 62968998 Exonic hg19 NA AV729016 Out-of-frame Intra-chr q21.31 q24.1 119807 ChimerSeq ChiTaRs ChiTaRs ESCO1-FAM210A ESCO1 chr18 19180655 FAM210A chr18 13681637 Exonic hg19 NA BG616150 Out-of-frame Intra-chr q11.2 p11.21 KB 119808 ChimerSeq ChiTaRs ChiTaRs H1F0-ADCY2 H1F0 chr22 38202551 ADCY2 chr1 152004992 Exonic hg19 NA DR421898 Out-of-frame Inter-chr q13.1 p15.31 119809 ChimerSeq ChiTaRs ChiTaRs CRELD2-P2RX4 CRELD2 chr22 50321176 P2RX4 chr12 121666636 Exonic hg19 NA BF509192 Out-of-frame Inter-chr q13.33 q24.31 119810 ChimerSeq ChiTaRs ChiTaRs RBFA-RBFA RBFA chr18 77806395 RBFA chr18 77805756 Exonic hg19 NA BE222251 Out-of-frame Intra-chr q23 q23 119811 ChimerSeq ChiTaRs ChiTaRs PTRH2-PRKCB PTRH2 chr17 57784772 PRKCB chr16 24166003 Exonic hg19 NA DA481806 Out-of-frame Inter-chr q23.1 p12.2 Tumor suppressor gene 119812 ChimerSeq ChiTaRs ChiTaRs COL1A1-GRAP2 COL1A1 chr17 48261640 GRAP2 chr22 40366915 Exonic hg19 NA AI291777 Out-of-frame Inter-chr q21.33 Oncogene q13.1 119813 ChimerSeq ChiTaRs ChiTaRs DEXI-PSMB3 DEXI chr16 11036184 PSMB3 chr17 36916738 Exonic hg19 NA BU509373 Out-of-frame Inter-chr p13.13 119814 ChimerSeq ChiTaRs ChiTaRs MPHOSPH8-MPHOSPH8 MPHOSPH8 chr13 20224401 MPHOSPH8 chr13 20216252 Exonic hg19 NA BI858901 Out-of-frame Intra-chr q12.11 q12.11 119815 ChimerSeq ChiTaRs ChiTaRs TCF12-DDX39B TCF12 chr15 57213287 DDX39B chr6 3017829 Exonic hg19 NA DB247200 Out-of-frame Inter-chr q21.3 Oncogene Transcription factor 119816 ChimerSeq ChiTaRs ChiTaRs NQO1-TTC37 NQO1 chr16 69760461 TTC37 chr5 94814082 Exonic hg19 NA BM755010 Out-of-frame Inter-chr q22.1 q15 119817 ChimerSeq ChiTaRs ChiTaRs MRPL51-SPTLC1 MRPL51 chr12 6602426 SPTLC1 chr9 94821472 Exonic hg19 NA DA774691 Out-of-frame Inter-chr p13.31 q22.31 119818 ChimerSeq ChiTaRs ChiTaRs CDK2AP2-AGPAT6 CDK2AP2 chr11 67274068 AGPAT6 chr8 41469732 Exonic hg19 NA AW264211 Out-of-frame Inter-chr q13.2 119819 ChimerSeq ChiTaRs ChiTaRs SH2B3-PPFIA3 SH2B3 chr12 111888823 PPFIA3 chr19 49652402 Exonic hg19 NA BQ300070 Out-of-frame Inter-chr q24.12 Tumor suppressor gene q13.33 119820 ChimerSeq ChiTaRs ChiTaRs PAPLN-NDRG2 PAPLN chr14 73718266 NDRG2 chr14 21484932 Exonic hg19 NA AK098388 Out-of-frame Intra-chr q24.2 q11.2 Tumor suppressor gene KB 119821 ChimerSeq ChiTaRs ChiTaRs CAND1-PHF13 CAND1 chr12 67703949 PHF13 chr1 6683966 Exonic hg19 NA AK074922 Out-of-frame Inter-chr q14.3 p36.31 119822 ChimerSeq ChiTaRs ChiTaRs ELOF1-KIF1A ELOF1 chr19 11665182 KIF1A chr2 241656132 Exonic hg19 NA BP229722 Out-of-frame Inter-chr p13.2 q37.3 119823 ChimerSeq ChiTaRs ChiTaRs SERPINA1-TMEM123 SERPINA1 chr14 94849090 TMEM123 chr11 102267280 Exonic hg19 NA BF733145 Out-of-frame Inter-chr q32.13 q22.2 119824 ChimerSeq ChiTaRs ChiTaRs EEF2-PEX14 EEF2 chr19 3976308 PEX14 chr1 10690327 Exonic hg19 NA AW874543 Out-of-frame Inter-chr p13.3 p36.22 119825 ChimerSeq ChiTaRs ChiTaRs ATP5G2-DDX21 ATP5G2 chr12 54063120 DDX21 chr10 70737375 Exonic hg19 NA BQ008586 Out-of-frame Inter-chr q13.13 q22.1 119826 ChimerSeq ChiTaRs ChiTaRs CD163-A2ML1 CD163 chr12 7651516 A2ML1 chr12 9010636 Exonic hg19 NA BF088823 Out-of-frame Intra-chr p13.31 p13.31 119827 ChimerSeq ChiTaRs ChiTaRs SRRM2-P4HTM SRRM2 chr16 2812754 P4HTM chr3 49044474 Exonic hg19 NA AV727990 Out-of-frame Inter-chr p13.3 p21.31 119828 ChimerSeq ChiTaRs ChiTaRs TOX4-BAP1 TOX4 chr14 21967314 BAP1 chr3 52438507 Exonic hg19 NA CA437449 Out-of-frame Inter-chr q11.2 p21.1 Oncogene Tumor suppressor gene 119829 ChimerSeq ChiTaRs ChiTaRs EIF3K-PGK1 EIF3K chr19 39127593 PGK1 chrX 77372810 Exonic hg19 NA AW084209 Out-of-frame Inter-chr q21.1 119830 ChimerSeq ChiTaRs ChiTaRs PARD6A-LOC100507412 PARD6A chr16 67695850 LOC100507412 chr? 109557 Exonic hg19 NA DA058995 Out-of-frame Inter-chr q22.1 119831 ChimerSeq ChiTaRs ChiTaRs CLEC18A-LTBP1 CLEC18A chr16 70099748 LTBP1 chr2 33525516 Exonic hg19 NA BC051464 Out-of-frame Inter-chr q22.1 p22.3 119832 ChimerSeq ChiTaRs ChiTaRs CTSZ-CLIC1 CTSZ chr20 57570433 CLIC1 chr6 3030825 Exonic hg19 NA CA309759 Out-of-frame Inter-chr q13.32 119833 ChimerSeq ChiTaRs ChiTaRs UNC13A-WBP2 UNC13A chr19 17759417 WBP2 chr17 73841825 Exonic hg19 NA AK127106 Out-of-frame Inter-chr p13.11 q25.1 119834 ChimerSeq ChiTaRs ChiTaRs TBC1D2B-YIPF1 TBC1D2B chr15 78317638 YIPF1 chr1 54320672 Exonic hg19 NA BQ930999 Out-of-frame Inter-chr q25.1 p32.3 119835 ChimerSeq ChiTaRs ChiTaRs DDX5-TRBV20-1 DDX5 chr17 62502407 TRBV20-1 chr16 2105413 Exonic hg19 NA DB152516 Out-of-frame Inter-chr q23.3 119836 ChimerSeq ChiTaRs ChiTaRs CHKA-PPIH CHKA chr11 67829503 PPIH chr1 43133418 Exonic hg19 NA BP367834 Out-of-frame Inter-chr q13.2 p34.2 119837 ChimerSeq ChiTaRs ChiTaRs PFN1-DNM3 PFN1 chr17 4851820 DNM3 chr1 172357881 Exonic hg19 NA DA340470 Out-of-frame Inter-chr p13.2 Tumor suppressor gene q24.3 119838 ChimerSeq ChiTaRs ChiTaRs LYSMD4-SEC14L1 LYSMD4 chr15 100272873 SEC14L1 chr17 75205457 Exonic hg19 NA AA368545 Out-of-frame Inter-chr q26.3 q25.2 119839 ChimerSeq ChiTaRs ChiTaRs U2AF2-KCNK1 U2AF2 chr19 56171916 KCNK1 chr1 233802441 Exonic hg19 NA DB472673 Out-of-frame Inter-chr q13.42 q42.2 119840 ChimerSeq ChiTaRs ChiTaRs C20orf27-PSMD4 C20orf27 chr20 3735159 PSMD4 chr1 151237348 Exonic hg19 NA BU538390 Out-of-frame Inter-chr p13 q21.3 119841 ChimerSeq ChiTaRs ChiTaRs APLP2-HNRNPF APLP2 chr11 129979374 HNRNPF chr10 43883036 Exonic hg19 NA DA660414 Out-of-frame Inter-chr q24.3 q11.21 119842 ChimerSeq ChiTaRs ChiTaRs LPPR2-COPS6 LPPR2 chr19 11475616 COPS6 chr7 99689662 Exonic hg19 NA CD672154 Out-of-frame Inter-chr q22.1 119843 ChimerSeq ChiTaRs ChiTaRs CAND1-GNS CAND1 chr12 67696395 GNS chr12 65115383 Exonic hg19 NA BQ434418 In-Frame Intra-chr q14.3 q14.3 119844 ChimerSeq ChiTaRs ChiTaRs HSP90AA1-CCDC91 HSP90AA1 chr14 102551729 CCDC91 chr12 28603291 Exonic hg19 NA BQ318634 Out-of-frame Inter-chr q32.31 Oncogene p11.22 119845 ChimerSeq ChiTaRs ChiTaRs EXOSC6-ENO1 EXOSC6 chr16 70285799 ENO1 chr1 8927188 Exonic hg19 NA CR993092 Out-of-frame Inter-chr q22.1 p36.23 119846 ChimerSeq ChiTaRs ChiTaRs SLC4A8-LMBRD1 SLC4A8 chr12 51904007 LMBRD1 chr6 70385751 Exonic hg19 NA DB569271 Out-of-frame Inter-chr q13.13 q13 119847 ChimerSeq ChiTaRs ChiTaRs YAF2-DMTF1 YAF2 chr12 42610863 DMTF1 chr7 86822574 Exonic hg19 NA AU253133 Out-of-frame Inter-chr q12 q21.12 Tumor suppressor gene Transcription factor 119848 ChimerSeq ChiTaRs ChiTaRs BRCA1-ZNF706 BRCA1 chr17 41277787 ZNF706 chr8 102211185 Exonic hg19 NA AV764395 Out-of-frame Inter-chr q21.31 Oncogene Tumor suppressor gene q22.3 Transcription factor 119849 ChimerSeq ChiTaRs ChiTaRs RPL3-BCL2L2-PABPN1 RPL3 chr22 39714462 BCL2L2-PABPN1 chr14 23795153 Exonic hg19 NA CX786698 Out-of-frame Inter-chr q13.1 q11.2 Oncogene 119850 ChimerSeq ChiTaRs ChiTaRs DYNC1H1-MPP6 DYNC1H1 chr14 102517084 MPP6 chr7 24663301 Exonic hg19 NA AA256222 Out-of-frame Inter-chr q32.31 p15.3 119851 ChimerSeq ChiTaRs ChiTaRs COL1A1-TNXB COL1A1 chr17 48261534 TNXB chr6 3354031 Exonic hg19 NA AI868659 Out-of-frame Inter-chr q21.33 Oncogene 119852 ChimerSeq ChiTaRs ChiTaRs NEDD8-MDP1-NDRG1 NEDD8-MDP1 chr14 24701579 NDRG1 chr8 134249878 Exonic hg19 NA CD693882 Out-of-frame Inter-chr q12 q24.22 119853 ChimerSeq ChiTaRs ChiTaRs HSP90AA1-VPS13B HSP90AA1 chr14 102553381 VPS13B chr8 100508108 Exonic hg19 NA DA609865 Out-of-frame Inter-chr q32.31 Oncogene q22.2 119854 ChimerSeq ChiTaRs ChiTaRs ISYNA1-NCDN ISYNA1 chr19 18546438 NCDN chr1 36032076 Exonic hg19 NA BF945926 Out-of-frame Inter-chr p13.11 p34.3 119855 ChimerSeq ChiTaRs ChiTaRs KIAA0100-TRAPPC3 KIAA0100 chr17 26972132 TRAPPC3 chr1 36602637 Exonic hg19 NA AK130007 Out-of-frame Inter-chr q11.2 p34.3 119856 ChimerSeq ChiTaRs ChiTaRs ZNF266-DENND5A ZNF266 chr19 9546217 DENND5A chr11 9166540 Exonic hg19 NA DB121048 Out-of-frame Inter-chr p13.2 Transcription factor p15.4 119857 ChimerSeq ChiTaRs ChiTaRs MLL-FRYL MLL chr11 118355029 FRYL chr4 48529632 Exonic hg19 NA DQ299940 In-Frame Inter-chr q23.3 p11 119858 ChimerSeq ChiTaRs ChiTaRs SRR-ROMO1 SRR chr17 2227400 ROMO1 chr20 34288835 Exonic hg19 NA CN347172 Out-of-frame Inter-chr p13.3 q11.22 119859 ChimerSeq ChiTaRs ChiTaRs TMEM106C-IFRD2 TMEM106C chr12 48362661 IFRD2 chr3 50326691 Exonic hg19 NA BF002318 3'UTR-CDS Inter-chr q13.11 p21.31 119860 ChimerSeq ChiTaRs ChiTaRs UBA52-LOC100129620 UBA52 chr19 18685916 LOC100129620 chr1 99473907 Exonic hg19 NA CD250077 Out-of-frame Inter-chr p13.11 119861 ChimerSeq ChiTaRs ChiTaRs TUBA1C-UBB TUBA1C chr12 49667117 UBB chr17 16285676 Exonic hg19 NA CD367941 Out-of-frame Inter-chr q13.12 p11.2 119862 ChimerSeq ChiTaRs ChiTaRs SIRT7-LOC100130950 SIRT7 chr17 79874456 LOC100130950 chr17 5118441 Exonic hg19 NA AI864539 CDS-5'UTR Intra-chr q25.3 119863 ChimerSeq ChiTaRs ChiTaRs SMTN-AMT SMTN chr22 31500736 AMT chr3 49454213 Exonic hg19 NA AX747817 Out-of-frame Inter-chr q12.2 p21.31 119864 ChimerSeq ChiTaRs ChiTaRs SENP1-MSRB3 SENP1 chr12 48499840 MSRB3 chr12 65702308 Exonic hg19 NA CK902687 5'UTR-5'UTR Intra-chr q13.11 q14.3 119865 ChimerSeq ChiTaRs ChiTaRs SUN2-MED10 SUN2 chr22 39178755 MED10 chr5 6372616 Exonic hg19 NA AY453399 Out-of-frame Inter-chr q13.1 p15.31 119866 ChimerSeq ChiTaRs ChiTaRs SLTM-ADM SLTM chr15 59171958 ADM chr11 10326748 Exonic hg19 NA AW452874 Out-of-frame Inter-chr q22.1 p15.4 119867 ChimerSeq ChiTaRs ChiTaRs CCPG1-DNAJB11 CCPG1 chr15 55652689 DNAJB11 chr3 186301734 Exonic hg19 NA BE925161 Out-of-frame Inter-chr q21.3 q27.3 119868 ChimerSeq ChiTaRs ChiTaRs BCL2L2-PABPN1-NASP BCL2L2-PABPN1 chr14 23794553 NASP chr1 46073797 Exonic hg19 NA CA446581 Out-of-frame Inter-chr q11.2 Oncogene p34.1 119869 ChimerSeq ChiTaRs ChiTaRs NEAT1-PPM1A NEAT1 chr11 65193452 PPM1A chr14 60754624 Exonic hg19 NA BG485165 Out-of-frame Inter-chr q13.1 q23.1 Tumor suppressor gene 119870 ChimerSeq ChiTaRs ChiTaRs ACTG1-PIGR ACTG1 chr17 79478055 PIGR chr1 207103333 Exonic hg19 NA AW604857 Out-of-frame Inter-chr q25.3 q32.1 119871 ChimerSeq ChiTaRs ChiTaRs RAD23A-ARF3 RAD23A chr19 13064456 ARF3 chr12 49331931 Exonic hg19 NA BF509886 Out-of-frame Inter-chr p13.13 q13.12 119872 ChimerSeq ChiTaRs ChiTaRs RAB22A-MYO9B RAB22A chr20 56886179 MYO9B chr19 17256206 Exonic hg19 NA XX000015 Out-of-frame Inter-chr q13.32 p13.11 119873 ChimerSeq ChiTaRs ChiTaRs NIN-TAGLN NIN chr14 51238144 TAGLN chr11 117075401 Exonic hg19 NA W48800 Out-of-frame Inter-chr q22.1 Oncogene q23.3 Tumor suppressor gene 119874 ChimerSeq ChiTaRs ChiTaRs TBC1D15-ATF7IP TBC1D15 chr12 72233591 ATF7IP chr12 14576840 Exonic hg19 NA DB067568 5'UTR-5'UTR Intra-chr q21.1 p13.1 119875 ChimerSeq ChiTaRs ChiTaRs RNF185-CFC1B RNF185 chr22 31601365 CFC1B chr2 131350353 Exonic hg19 NA BI438386 Out-of-frame Inter-chr q12.2 q21.1 119876 ChimerSeq ChiTaRs ChiTaRs MMP14-MED23 MMP14 chr14 23305858 MED23 chr6 131908097 Exonic hg19 NA CN388362 Out-of-frame Inter-chr q11.2 q23.2 119877 ChimerSeq ChiTaRs ChiTaRs DSG2-GTF2E1 DSG2 chr18 29128814 GTF2E1 chr3 120489626 Exonic hg19 NA BF509928 3'UTR-CDS Inter-chr q12.1 q13.33 119878 ChimerSeq ChiTaRs ChiTaRs SF1-ZFP28 SF1 chr11 64545953 ZFP28 chr19 57065051 Exonic hg19 NA BX491432 Out-of-frame Inter-chr q13.1 q13.43 Transcription factor 119879 ChimerSeq ChiTaRs ChiTaRs MALAT1-LAMB1 MALAT1 chr11 65267540 LAMB1 chr7 107564465 Exonic hg19 NA BE775142 Out-of-frame Inter-chr q13.1 q31.1 119880 ChimerSeq ChiTaRs ChiTaRs FNDC3A-PSG3 FNDC3A chr13 49776072 PSG3 chr19 43234013 Exonic hg19 NA DA832291 Out-of-frame Inter-chr q14.2 q13.2 119881 ChimerSeq ChiTaRs ChiTaRs PACS1-CDK8 PACS1 chr11 66010802 CDK8 chr13 26966520 Exonic hg19 NA M78127 Out-of-frame Inter-chr q13.1 q12.13 CMGC:CDK Oncogene 119882 ChimerSeq ChiTaRs ChiTaRs KRT19-EXOSC10 KRT19 chr17 39680521 EXOSC10 chr1 11126726 Exonic hg19 NA BG151239 Out-of-frame Inter-chr q21.2 Tumor suppressor gene p36.22 119883 ChimerSeq ChiTaRs ChiTaRs SNRNP25-COPS4 SNRNP25 chr16 107439 COPS4 chr4 83996775 Exonic hg19 NA BP394128 Out-of-frame Inter-chr p13.3 q21.22 119884 ChimerSeq ChiTaRs ChiTaRs LGMN-ENO1 LGMN chr14 93214953 ENO1 chr1 8928060 Exonic hg19 NA AA157183 Out-of-frame Inter-chr q32.12 p36.23 119885 ChimerSeq ChiTaRs ChiTaRs MALAT1-RPN1 MALAT1 chr11 65271402 RPN1 chr3 128341096 Exonic hg19 NA BM838536 Out-of-frame Inter-chr q13.1 q21.3 119886 ChimerSeq ChiTaRs ChiTaRs NPC2-SRI NPC2 chr14 74946960 SRI chr7 87838688 Exonic hg19 NA AV722305 Out-of-frame Inter-chr q24.3 q21.12 119887 ChimerSeq ChiTaRs ChiTaRs PPP1R12A-SEPT10 PPP1R12A chr12 80211292 2010_ 9_ 1_ chr2 110343345 Exonic hg19 NA XX000002 Out-of-frame Inter-chr q21.31 119888 ChimerSeq ChiTaRs ChiTaRs CPM-RBM48 CPM chr12 69263277 RBM48 chr7 92158120 Exonic hg19 NA DA400817 Out-of-frame Inter-chr q15 q21.2 119889 ChimerSeq ChiTaRs ChiTaRs ANKRD11-HABP4 ANKRD11 chr16 89349817 HABP4 chr9 99252996 Exonic hg19 NA AK026001 Out-of-frame Inter-chr q24.3 q22.32 119890 ChimerSeq ChiTaRs ChiTaRs GSTP1-PSMB1 GSTP1 chr11 67352713 PSMB1 chr6 170855254 Exonic hg19 NA BG978110 Out-of-frame Inter-chr q13.2 Tumor suppressor gene 119891 ChimerSeq ChiTaRs ChiTaRs ADAMTS1-C1S ADAMTS1 chr21 28217728 C1S chr12 7168070 Exonic hg19 NA BP288410 5'UTR-5'UTR Inter-chr q21.3 p13.31 119892 ChimerSeq ChiTaRs ChiTaRs EIF5A-DNAJC24 EIF5A chr17 7213009 DNAJC24 chr11 31391414 Exonic hg19 NA CN340509 Out-of-frame Inter-chr p13.1 p13 119893 ChimerSeq ChiTaRs ChiTaRs SLPI-APPBP2 SLPI chr20 43883205 APPBP2 chr17 58541425 Exonic hg19 NA DB024572 Out-of-frame Inter-chr q13.12 q23.2 119894 ChimerSeq ChiTaRs ChiTaRs VAMP2-LGALS1 VAMP2 chr17 8065692 LGALS1 chr22 38075753 Exonic hg19 NA D51537 Out-of-frame Inter-chr p13.1 q13.1 119895 ChimerSeq ChiTaRs ChiTaRs MIR5095-CTBP2 MIR5095 chr20 55983349 CTBP2 chr10 126677468 Exonic hg19 NA AK024316 Out-of-frame Inter-chr p32.3 q26.13 119896 ChimerSeq ChiTaRs ChiTaRs ELL3-DPYSL3 ELL3 chr15 44085282 DPYSL3 chr5 146772754 Exonic hg19 NA DA783243 Out-of-frame Inter-chr q15.3 q32 119897 ChimerSeq ChiTaRs ChiTaRs CSH1-SVEP1 CSH1 chr17 61972318 SVEP1 chr9 113170908 Exonic hg19 NA BQ026103 Out-of-frame Inter-chr q23.3 q31.3 119898 ChimerSeq ChiTaRs ChiTaRs RPL18-GANAB RPL18 chr19 49120082 GANAB chr11 62392305 Exonic hg19 NA DW439793 Out-of-frame Inter-chr q13.33 q12.3 Tumor suppressor gene 119899 ChimerSeq ChiTaRs ChiTaRs DLST-ELAC2 DLST chr14 75356055 ELAC2 chr17 12915070 Exonic hg19 NA DA537507 Out-of-frame Inter-chr q24.3 p12 119900 ChimerSeq ChiTaRs ChiTaRs VAMP2-ACTB VAMP2 chr17 8066292 ACTB chr7 5566931 Exonic hg19 NA BI019526 Out-of-frame Inter-chr p13.1 p22.1 119901 ChimerSeq ChiTaRs ChiTaRs APLP2-SERPING1 APLP2 chr11 130013770 SERPING1 chr11 57373594 Exonic hg19 NA CB162631 Out-of-frame Intra-chr q24.3 q12.1 119902 ChimerSeq ChiTaRs ChiTaRs C11orf30-SLC30A9 C11orf30 chr11 76183884 SLC30A9 chr4 42088097 Exonic hg19 NA AK075222 Out-of-frame Inter-chr p13 119903 ChimerSeq ChiTaRs ChiTaRs TUBGCP3-PLA2G1B TUBGCP3 chr13 113159210 PLA2G1B chr12 120763707 Exonic hg19 NA BP323855 Out-of-frame Inter-chr q24.31 119904 ChimerSeq ChiTaRs ChiTaRs C3-GALNT6 C3 chr19 6720616 GALNT6 chr12 51747149 Exonic hg19 NA AK225124 Out-of-frame Inter-chr p13.3 q13.13 119905 ChimerSeq ChiTaRs ChiTaRs INTS6-CEP44 INTS6 chr13 52028465 CEP44 chr4 175252629 Exonic hg19 NA CR736962 Out-of-frame Inter-chr q14.3 Tumor suppressor gene q34.1 119906 ChimerSeq ChiTaRs ChiTaRs ZNF664-GALNT2 ZNF664 chr12 124458467 GALNT2 chr1 230416045 Exonic hg19 NA BJ995070 Out-of-frame Inter-chr q24.31 Transcription factor q42.13 119907 ChimerSeq ChiTaRs ChiTaRs N4BP2L2-MBP N4BP2L2 chr13 33096412 MBP chr18 74690790 Exonic hg19 NA AK125067 Out-of-frame Inter-chr q13.1 q23 119908 ChimerSeq ChiTaRs ChiTaRs PHLDB1-TAGLN PHLDB1 chr11 118527495 TAGLN chr11 117074987 Exonic hg19 NA AW352228 Out-of-frame Intra-chr q23.3 q23.3 Tumor suppressor gene 119909 ChimerSeq ChiTaRs ChiTaRs ZFYVE26-MFSD2A ZFYVE26 chr14 68283306 MFSD2A chr1 40435454 Exonic hg19 NA AK308233 5'UTR-3'UTR Inter-chr q24.1 p34.2 Tumor suppressor gene 119910 ChimerSeq ChiTaRs ChiTaRs MALAT1-CLGN MALAT1 chr11 65267423 CLGN chr4 141310240 Exonic hg19 NA BU568984 Out-of-frame Inter-chr q13.1 q31.1 119911 ChimerSeq ChiTaRs ChiTaRs PAK4-MALL PAK4 chr19 39670044 MALL chr2 110842708 Exonic hg19 NA BQ016010 Out-of-frame Inter-chr q13.2 STE:STE20 q13 119912 ChimerSeq ChiTaRs ChiTaRs TELO2-SMYD5 TELO2 chr16 1552763 SMYD5 chr2 73453744 Exonic hg19 NA AK294283 Out-of-frame Inter-chr p13.3 p13.2 119913 ChimerSeq ChiTaRs ChiTaRs U2AF1-KLHL13 U2AF1 chr21 44514654 KLHL13 chrX 117060314 Exonic hg19 NA BM679107 Out-of-frame Inter-chr q22.3 Oncogene q24 119914 ChimerSeq ChiTaRs ChiTaRs TXN2-DIAPH3 TXN2 chr22 36863639 DIAPH3 chr13 60686261 Exonic hg19 NA AW665284 Out-of-frame Inter-chr q12.3 q21.2 119915 ChimerSeq ChiTaRs ChiTaRs MYH7-BIRC6 MYH7 chr14 23900121 BIRC6 chr2 32836513 Exonic hg19 NA AA093963 Out-of-frame Inter-chr q11.2 p22.3 119916 ChimerSeq ChiTaRs ChiTaRs DEF8-APLP2 DEF8 chr16 90025774 APLP2 chr11 130010298 Exonic hg19 NA CB528318 3'UTR-CDS Inter-chr q24.3 q24.3 119917 ChimerSeq ChiTaRs ChiTaRs DSTN-FBXO31 DSTN chr20 17588489 FBXO31 chr16 87394067 Exonic hg19 NA BF886494 Out-of-frame Inter-chr p12.1 q24.2 Tumor suppressor gene 119918 ChimerSeq ChiTaRs ChiTaRs MPG-LOC100507412 MPG chr16 136346 LOC100507412 chr? 109964 Exonic hg19 NA BM991743 Out-of-frame Inter-chr p13.3 119919 ChimerSeq ChiTaRs ChiTaRs VPS13C-MBP VPS13C chr15 62352589 MBP chr18 74692273 Exonic hg19 NA DA262042 Out-of-frame Inter-chr q22.2 q23 119920 ChimerSeq ChiTaRs ChiTaRs NSF-PIP5K1A NSF chr17 44799500 PIP5K1A chr1 151210665 Exonic hg19 NA CD388184 Out-of-frame Inter-chr q21.3 119921 ChimerSeq ChiTaRs ChiTaRs ZNF720-SAP30L ZNF720 chr16 31770872 SAP30L chr5 153830352 Exonic hg19 NA AW952907 Out-of-frame Inter-chr p11.2 q33.2 119922 ChimerSeq ChiTaRs ChiTaRs RPS3-ARMC5 RPS3 chr11 75115609 ARMC5 chr16 31471296 Exonic hg19 NA DA636472 Out-of-frame Inter-chr q13.4 p11.2 Tumor suppressor gene 119923 ChimerSeq ChiTaRs ChiTaRs C17orf49-STK10 C17orf49 chr17 6920839 STK10 chr5 171484385 Exonic hg19 NA BU626724 Out-of-frame Inter-chr p13.1 q35.1 Tumor suppressor gene 119924 ChimerSeq ChiTaRs ChiTaRs DRAP1-ANKRD65 DRAP1 chr11 65689031 ANKRD65 chr1 1356177 Exonic hg19 NA AW452265 Out-of-frame Inter-chr q13.1 Transcription factor p36.33 119925 ChimerSeq ChiTaRs ChiTaRs SLPI-SEC14L2 SLPI chr20 43883172 SEC14L2 chr22 30812042 Exonic hg19 NA R49913 Out-of-frame Inter-chr q13.12 q12.2 Tumor suppressor gene 119926 ChimerSeq ChiTaRs ChiTaRs NLRC5-PUM1 NLRC5 chr16 57063920 PUM1 chr1 31448211 Exonic hg19 NA AK097030 Out-of-frame Inter-chr q13 p35.2 119927 ChimerSeq ChiTaRs ChiTaRs TESC-PSMA7 TESC chr12 117484452 PSMA7 chr20 60711994 Exonic hg19 NA BG474310 Out-of-frame Inter-chr q24.22 q13.33 119928 ChimerSeq ChiTaRs ChiTaRs HSPBP1-TRIM8 HSPBP1 chr19 55774050 TRIM8 chr10 104417274 Exonic hg19 NA CA310781 CDS-3'UTR Inter-chr q13.42 q24.32 119929 ChimerSeq ChiTaRs ChiTaRs PSMC1-SYTL1 PSMC1 chr14 90730159 SYTL1 chr1 27673966 Exonic hg19 NA DB102097 Out-of-frame Inter-chr q32.11 p36.11 119930 ChimerSeq ChiTaRs ChiTaRs USP35-ATAD3B USP35 chr11 77907301 ATAD3B chr1 1414090 Exonic hg19 NA DB111027 Out-of-frame Inter-chr q14.1 p36.33 119931 ChimerSeq ChiTaRs ChiTaRs SENP1-ILF3 SENP1 chr12 48479516 ILF3 chr19 10787699 Exonic hg19 NA CD367536 Out-of-frame Inter-chr q13.11 p13.2 119932 ChimerSeq ChiTaRs ChiTaRs RECQL5-IVNS1ABP RECQL5 chr17 73630284 IVNS1ABP chr1 185270589 Exonic hg19 NA DA286401 Out-of-frame Inter-chr q25.1 q25.3 119933 ChimerSeq ChiTaRs ChiTaRs IGFBP4-DCN IGFBP4 chr17 38613815 DCN chr12 91572307 Exonic hg19 NA BP289909 Out-of-frame Inter-chr q21.2 Tumor suppressor gene q21.33 Tumor suppressor gene 119934 ChimerSeq ChiTaRs ChiTaRs GJC1-HSPB1 GJC1 chr17 42878996 HSPB1 chr7 75933535 Exonic hg19 NA R77849 Out-of-frame Inter-chr q21.31 q11.23 119935 ChimerSeq ChiTaRs ChiTaRs SNRPD1-RPS13 SNRPD1 chr18 19209056 RPS13 chr11 17095944 Exonic hg19 NA BU935289 Out-of-frame Inter-chr q11.2 p15.1 119936 ChimerSeq ChiTaRs ChiTaRs ALG11-SEMA3A ALG11 chr13 52586598 SEMA3A chr7 83590691 Exonic hg19 NA BF700780 Out-of-frame Inter-chr q14.3 q21.11 119937 ChimerSeq ChiTaRs ChiTaRs RPL28-GAPDH RPL28 chr19 55899730 GAPDH chr12 6644002 Exonic hg19 NA AW498880 Out-of-frame Inter-chr q13.42 p13.31 119938 ChimerSeq ChiTaRs ChiTaRs GLIS2-EIF1AX GLIS2 chr16 4388373 EIF1AX chrX 20144300 Exonic hg19 NA BQ436116 Out-of-frame Inter-chr p13.3 Transcription factor p22.12 119939 ChimerSeq ChiTaRs ChiTaRs KCTD12-ROBO2 KCTD12 chr13 77460540 ROBO2 chr3 77595513 Exonic hg19 NA DA496044 5'UTR-CDS Inter-chr q22.3 p12.3 119940 ChimerSeq ChiTaRs ChiTaRs GCDH-LSP1 GCDH chr19 13010784 LSP1 chr11 1913003 Exonic hg19 NA AA714638 Out-of-frame Inter-chr p13.13 p15.5 119941 ChimerSeq ChiTaRs ChiTaRs RPL23-ARL8B RPL23 chr17 37009988 ARL8B chr3 5220038 Exonic hg19 NA DR002474 Out-of-frame Inter-chr q12 p26.1 119942 ChimerSeq ChiTaRs ChiTaRs CS-SUPT16H CS chr12 56665809 SUPT16H chr14 21828574 Exonic hg19 NA AI336282 Out-of-frame Inter-chr q13.3 q11.2 119943 ChimerSeq ChiTaRs ChiTaRs L2HGDH-MBP L2HGDH chr14 50712266 MBP chr18 74696800 Exonic hg19 NA DA137061 Out-of-frame Inter-chr q21.3 q23 119944 ChimerSeq ChiTaRs ChiTaRs C1S-SPARC C1S chr12 7178601 SPARC chr5 151043681 Exonic hg19 NA BM992057 Out-of-frame Inter-chr p13.31 q33.1 Tumor suppressor gene 119945 ChimerSeq ChiTaRs ChiTaRs RPL13A-ACTG1 RPL13A chr19 49995565 ACTG1 chr17 79478723 Exonic hg19 NA BM677070 Out-of-frame Inter-chr q13.33 q25.3 119946 ChimerSeq ChiTaRs ChiTaRs TNFRSF12A-KIAA0195 TNFRSF12A chr16 3072384 KIAA0195 chr17 73486403 Exonic hg19 NA AI813825 Out-of-frame Inter-chr p13.3 Tumor suppressor gene 119947 ChimerSeq ChiTaRs ChiTaRs C1RL-EVI5 C1RL chr12 7247770 EVI5 chr1 92976980 Exonic hg19 NA BU624441 Out-of-frame Inter-chr p13.31 p22.1 119948 ChimerSeq ChiTaRs ChiTaRs CDKN1B-GPR56 CDKN1B chr12 12871036 GPR56 chr16 57662545 Exonic hg19 NA DA407813 Out-of-frame Inter-chr p13.1 Tumor suppressor gene q21 119949 ChimerSeq ChiTaRs ChiTaRs KLK2-RDH11 KLK2 chr19 51382492 RDH11 chr14 68143994 Exonic hg19 NA AA658025 Out-of-frame Inter-chr q13.33 q24.1 119950 ChimerSeq ChiTaRs ChiTaRs MOAP1-ZAK MOAP1 chr14 93649026 ZAK chr2 174089772 Exonic hg19 NA BU633888 Out-of-frame Inter-chr TKL:MLK 119951 ChimerSeq ChiTaRs ChiTaRs ARL6IP4-LIG1 ARL6IP4 chr12 123466595 LIG1 chr19 48660271 Exonic hg19 NA BG979982 Out-of-frame Inter-chr q24.31 q13.33 Tumor suppressor gene 119952 ChimerSeq ChiTaRs ChiTaRs SMG1-CYP2C9 SMG1 chr16 18856881 CYP2C9 chr10 96740952 Exonic hg19 NA AV652799 Out-of-frame Inter-chr p12.3 Atypical:PIKK q23.33 119953 ChimerSeq ChiTaRs ChiTaRs SERPINA3-CD59 SERPINA3 chr14 95085693 CD59 chr11 33730668 Exonic hg19 NA BF826554 Out-of-frame Inter-chr q32.13 p13 119954 ChimerSeq ChiTaRs ChiTaRs GUSBP11-PQBP1 GUSBP11 chr22 24037352 PQBP1 chrX 48760123 Exonic hg19 NA AJ706466 Out-of-frame Inter-chr q11.23 p11.23 119955 ChimerSeq ChiTaRs ChiTaRs P2RX7-COQ9 P2RX7 chr12 121605334 COQ9 chr16 57493608 Exonic hg19 NA AW899099 Out-of-frame Inter-chr q24.31 q21 119956 ChimerSeq ChiTaRs ChiTaRs ITPR2-FAM59A ITPR2 chr12 26709255 FAM59A chr18 29992869 Exonic hg19 NA DA056326 Out-of-frame Inter-chr p11.23 119957 ChimerSeq ChiTaRs ChiTaRs HNRNPUL1-OTUD7B HNRNPUL1 chr19 41813510 OTUD7B chr1 149915352 Exonic hg19 NA BU632270 Out-of-frame Inter-chr q13.2 q21.2 119958 ChimerSeq ChiTaRs ChiTaRs EEA1-WDR61 EEA1 chr12 93172987 WDR61 chr15 78582784 Exonic hg19 NA BQ325124 Out-of-frame Inter-chr q22 Transcription factor q25.1 119959 ChimerSeq ChiTaRs ChiTaRs DSCAML1-UBR4 DSCAML1 chr11 117550570 UBR4 chr1 19407880 Exonic hg19 NA AW965639 Out-of-frame Inter-chr q23.3 p36.13 119960 ChimerSeq ChiTaRs ChiTaRs RPL23-MRPL10 RPL23 chr17 37006621 MRPL10 chr17 45904007 Exonic hg19 NA BE265135 Out-of-frame Intra-chr q12 q21.32 119961 ChimerSeq ChiTaRs ChiTaRs CYTH1-TERF2 CYTH1 chr17 76778347 TERF2 chr16 69400984 Exonic hg19 NA BI836301 Out-of-frame Inter-chr q25.3 q22.1 Transcription factor 119962 ChimerSeq ChiTaRs ChiTaRs LONP1-AZIN1 LONP1 chr19 5719834 AZIN1 chr8 103839229 Exonic hg19 NA X74215 Out-of-frame Inter-chr p13.3 q22.3 119963 ChimerSeq ChiTaRs ChiTaRs PTPN9-BUB3 PTPN9 chr15 75816640 BUB3 chr10 124924563 Exonic hg19 NA BG204496 Out-of-frame Inter-chr q24.2 q26.13 119964 ChimerSeq ChiTaRs ChiTaRs MB-PSRC1 MB chr22 36013376 PSRC1 chr1 109823029 Exonic hg19 NA DA897653 Out-of-frame Inter-chr q12.3 p13.3 119965 ChimerSeq ChiTaRs ChiTaRs CFL1-EED CFL1 chr11 65623714 EED chr11 85955817 Exonic hg19 NA CN291706 Out-of-frame Intra-chr q13.1 q14.2 Tumor suppressor gene 119966 ChimerSeq ChiTaRs ChiTaRs HNRNPM-DENND1A HNRNPM chr19 8539105 DENND1A chr9 126143288 Exonic hg19 NA AK310661 Out-of-frame Inter-chr p13.2 q33.3 119967 ChimerSeq ChiTaRs ChiTaRs PLCD3-TYK2 PLCD3 chr17 43189190 TYK2 chr19 10475565 Exonic hg19 NA BU633172 Out-of-frame Inter-chr q21.31 p13.2 TK:JakA 119968 ChimerSeq ChiTaRs ChiTaRs CHD6-MAML2 CHD6 chr20 40111994 MAML2 chr11 95925465 Exonic hg19 NA BF371156 Out-of-frame Inter-chr q12 q21 Oncogene 119969 ChimerSeq ChiTaRs ChiTaRs IFT20-GLS IFT20 chr17 26662497 GLS chr2 191827556 Exonic hg19 NA DC316034 Out-of-frame Inter-chr q11.2 q32.2 Tumor suppressor gene 119970 ChimerSeq ChiTaRs ChiTaRs NSF-VAT1L NSF chr17 380539 VAT1L chr16 77859284 Exonic hg19 NA CN308902 Out-of-frame Inter-chr q23.1 119971 ChimerSeq ChiTaRs ChiTaRs JUND-NASP JUND chr19 18392260 NASP chr1 46067972 Exonic hg19 NA BC080632 Out-of-frame Inter-chr p13.11 Transcription factor p34.1 119972 ChimerSeq ChiTaRs ChiTaRs GOLGA3-IGFBP5 GOLGA3 chr12 133346033 IGFBP5 chr2 217540047 Exonic hg19 NA BQ447459 Out-of-frame Inter-chr q24.33 q35 Tumor suppressor gene 119973 ChimerSeq ChiTaRs ChiTaRs AP2S1-EEF2 AP2S1 chr19 47341564 EEF2 chr19 3981413 Exonic hg19 NA AA452576 Out-of-frame Intra-chr q13.32 p13.3 119974 ChimerSeq ChiTaRs ChiTaRs SAFB-C2orf61 SAFB chr19 5653360 C2orf61 chr2 47388906 Exonic hg19 NA BF930423 Out-of-frame Inter-chr p13.3 Tumor suppressor gene Transcription factor 119975 ChimerSeq ChiTaRs ChiTaRs RDH11-PRSS23 RDH11 chr14 68144529 PRSS23 chr11 86662375 Exonic hg19 NA BF432108 Out-of-frame Inter-chr q24.1 q14.2 119976 ChimerSeq ChiTaRs ChiTaRs MALAT1-RCVRN MALAT1 chr11 65268865 RCVRN chr17 9801291 Exonic hg19 NA BM723127 Out-of-frame Inter-chr q13.1 p13.1 119977 ChimerSeq ChiTaRs ChiTaRs TFF1-RALB TFF1 chr21 43786638 RALB chr2 121036327 Exonic hg19 NA BM786342 Out-of-frame Inter-chr q22.3 q14.2 119978 ChimerSeq ChiTaRs ChiTaRs NDRG2-BAG6 NDRG2 chr14 21485141 BAG6 chr6 2943106 Exonic hg19 NA AI199706 Out-of-frame Inter-chr q11.2 Tumor suppressor gene p21.33 119979 ChimerSeq ChiTaRs ChiTaRs MYBPC2-PTGDS MYBPC2 chr19 50945535 PTGDS chr9 139872062 Exonic hg19 NA BC094690 Out-of-frame Inter-chr q13.33 q34.3 119980 ChimerSeq ChiTaRs ChiTaRs RPL27-KRT13 RPL27 chr17 41154938 KRT13 chr17 39661739 Exonic hg19 NA DB013482 Out-of-frame Intra-chr q21.31 q21.2 119981 ChimerSeq ChiTaRs ChiTaRs USP5-C6orf106 USP5 chr12 6975785 C6orf106 chr6 34555771 Exonic hg19 NA AI087163 Out-of-frame Inter-chr p13.31 p21.31 119982 ChimerSeq ChiTaRs ChiTaRs ARF3-NDUFA6 ARF3 chr12 49330851 NDUFA6 chr22 42482118 Exonic hg19 NA BQ668805 Out-of-frame Inter-chr q13.12 119983 ChimerSeq ChiTaRs ChiTaRs LDHB-SUPT3H LDHB chr12 21807610 SUPT3H chr6 44933785 Exonic hg19 NA BF913407 Out-of-frame Inter-chr p12.1 p21.1 119984 ChimerSeq ChiTaRs ChiTaRs BCL11B-TRA@ BCL11B chr14 99723878 TRA@ chr14 22918928 Exonic hg19 NA AY752979 Out-of-frame Intra-chr q32.2 Oncogene Transcription factor q11.2 119985 ChimerSeq ChiTaRs ChiTaRs RANGAP1-CCDC151 RANGAP1 chr22 41682192 CCDC151 chr19 11531796 Exonic hg19 NA BM800810 Out-of-frame Inter-chr q13.2 p13.2 119986 ChimerSeq ChiTaRs ChiTaRs PHF23-RRM1 PHF23 chr17 7139608 RRM1 chr11 4144413 Exonic hg19 NA AU125246 Out-of-frame Inter-chr p13.1 p15.4 Oncogene 119987 ChimerSeq ChiTaRs ChiTaRs GABRB3-DDX1 GABRB3 chr15 26790747 DDX1 chr2 15768763 Exonic hg19 NA BG329765 Out-of-frame Inter-chr q12 p24.3 119988 ChimerSeq ChiTaRs ChiTaRs SLC38A2-GGNBP2 SLC38A2 chr12 46754340 GGNBP2 chr17 34901480 Exonic hg19 NA BJ989733 Out-of-frame Inter-chr q13.11 Tumor suppressor gene 119989 ChimerSeq ChiTaRs ChiTaRs AES-NBPF11 AES chr19 3056355 NBPF11 chr1 147919705 Exonic hg19 NA T07296 Out-of-frame Inter-chr p13.3 q21.2 119990 ChimerSeq ChiTaRs ChiTaRs ZNF766-ITPR2 ZNF766 chr19 52785401 ITPR2 chr12 26648132 Exonic hg19 NA BF327272 Out-of-frame Inter-chr q13.41 Transcription factor p11.23 119991 ChimerSeq ChiTaRs ChiTaRs RPL27-CASP12 RPL27 chr17 41150848 CASP12 chr11 104761981 Exonic hg19 NA EC578828 In-Frame Inter-chr q21.31 q22.3 119992 ChimerSeq ChiTaRs ChiTaRs HSPA13-HSPBP1 HSPA13 chr21 15745146 HSPBP1 chr19 55785835 Exonic hg19 NA R59785 Out-of-frame Inter-chr q11.2 q13.42 119993 ChimerSeq ChiTaRs ChiTaRs PRR13-RPL8 PRR13 chr12 53839831 RPL8 chr8 146017436 Exonic hg19 NA BP306137 Out-of-frame Inter-chr q13.13 q24.3 119994 ChimerSeq ChiTaRs ChiTaRs GOSR1-USP38 GOSR1 chr17 28811281 USP38 chr4 144142328 Exonic hg19 NA DA505648 Out-of-frame Inter-chr q11.2 q31.21 119995 ChimerSeq ChiTaRs ChiTaRs SART1-DRD4 SART1 chr11 65744524 DRD4 chr11 637540 Exonic hg19 NA BQ186689 Out-of-frame Intra-chr q13.1 p15.5 119996 ChimerSeq ChiTaRs ChiTaRs MALAT1-BHLHE40 MALAT1 chr11 65268252 BHLHE40 chr3 5025976 Exonic hg19 NA AA459608 Out-of-frame Inter-chr q13.1 p26.1 Transcription factor 119997 ChimerSeq ChiTaRs ChiTaRs NPIPB7-BCYRN1 NPIPB7 chr16 28621312 BCYRN1 chrX 70519789 Exonic hg19 NA BM920046 Out-of-frame Inter-chr p12.1 p21 119998 ChimerSeq ChiTaRs ChiTaRs YWHAB-SLC29A3 YWHAB chr20 43536814 SLC29A3 chr10 73115874 Exonic hg19 NA BU626199 Out-of-frame Inter-chr q13.12 q22.1 119999 ChimerSeq ChiTaRs ChiTaRs LENG8-RTF1 LENG8 chr19 54972580 RTF1 chr15 41709475 Exonic hg19 NA AL833879 Out-of-frame Inter-chr q15.1 120000 ChimerSeq ChiTaRs ChiTaRs PITPNA-TRANK1 PITPNA chr17 1421872 TRANK1 chr3 36897502 Exonic hg19 NA EL593646 Out-of-frame Inter-chr p13.3 p22.2 120001 ChimerSeq ChiTaRs ChiTaRs UHRF1BP1L-PXK UHRF1BP1L chr12 100536625 PXK chr3 58351599 Exonic hg19 NA BG166334 Out-of-frame Inter-chr q23.1 p14.3 120002 ChimerSeq ChiTaRs ChiTaRs IL4I1-TUBB6 IL4I1 chr19 50411007 TUBB6 chr18 12326345 Exonic hg19 NA BU927907 Out-of-frame Inter-chr q13.33 p11.21 120003 ChimerSeq ChiTaRs ChiTaRs MTIF3-SSBP1 MTIF3 chr13 28024321 SSBP1 chr7 141438922 Exonic hg19 NA DA280527 Out-of-frame Inter-chr q12.2 120004 ChimerSeq ChiTaRs ChiTaRs MED9-NUP210L MED9 chr17 17395121 NUP210L chr1 154115613 Exonic hg19 NA AW966566 Out-of-frame Inter-chr p11.2 q21.3 120005 ChimerSeq ChiTaRs ChiTaRs MILR1-CFDP1 MILR1 chr17 62463763 CFDP1 chr16 75335711 Exonic hg19 NA AK300768 Out-of-frame Inter-chr q23.3 q23.1 120006 ChimerSeq ChiTaRs ChiTaRs PRPF8-LDHA PRPF8 chr17 1579560 LDHA chr11 18428658 Exonic hg19 NA BG122659 Out-of-frame Inter-chr p15.1 120007 ChimerSeq ChiTaRs ChiTaRs NDRG2-CALR NDRG2 chr14 21485317 CALR chr19 13054348 Exonic hg19 NA BF873592 Out-of-frame Inter-chr q11.2 Tumor suppressor gene p13.13 120008 ChimerSeq ChiTaRs ChiTaRs PANX1-PANX1 PANX1 chr11 93867609 PANX1 chr11 93867265 Exonic hg19 NA AA420506 Out-of-frame Intra-chr q21 q21 120009 ChimerSeq ChiTaRs ChiTaRs MLL-FRYL MLL chr11 118355690 FRYL chr4 48529633 Exonic hg19 NA DQ299938 In-Frame Inter-chr q23.3 p11 120010 ChimerSeq ChiTaRs ChiTaRs B4GALT5-CKB B4GALT5 chr20 48251011 CKB chr14 103987747 Exonic hg19 NA CX164716 Out-of-frame Inter-chr q13.13 q32.33 120011 ChimerSeq ChiTaRs ChiTaRs APLP2-HMP19 APLP2 chr11 129980520 HMP19 chr5 173534645 Exonic hg19 NA DA352509 Out-of-frame Inter-chr q24.3 q35.2 120012 ChimerSeq ChiTaRs ChiTaRs SMG1-KPNA3 SMG1 chr16 18937326 KPNA3 chr13 50306748 Exonic hg19 NA DA481995 Out-of-frame Inter-chr p12.3 Atypical:PIKK q14.2 120013 ChimerSeq ChiTaRs ChiTaRs ATXN7L3B-RPS13 ATXN7L3B chr12 74933276 RPS13 chr11 17096656 Exonic hg19 NA BG110883 Out-of-frame Inter-chr q21.1 p15.1 120014 ChimerSeq ChiTaRs ChiTaRs PITPNM2-TGM2 PITPNM2 chr12 123590102 TGM2 chr20 36770547 Exonic hg19 NA BG003279 Out-of-frame Inter-chr q24.31 q11.23 120015 ChimerSeq ChiTaRs ChiTaRs RNU12-RNPS1 RNU12 chr22 43011321 RNPS1 chr16 2313127 Exonic hg19 NA DA134109 Out-of-frame Inter-chr q13.2 p13.3 120016 ChimerSeq ChiTaRs ChiTaRs C19orf6-ATP5J2-PTCD1 C19orf6 chr19 1021122 ATP5J2-PTCD1 chr7 99056652 Exonic hg19 NA BP264249 Out-of-frame Inter-chr q22.1 120017 ChimerSeq ChiTaRs ChiTaRs RPS27L-CSDE1 RPS27L chr15 63449674 CSDE1 chr1 115260276 Exonic hg19 NA BF978658 Out-of-frame Inter-chr q22.2 p13.2 120018 ChimerSeq ChiTaRs ChiTaRs NPIPB7-TSG101 NPIPB7 chr16 28845944 TSG101 chr11 18524064 Exonic hg19 NA BI032727 Out-of-frame Inter-chr p12.1 p15.1 Tumor suppressor gene 120019 ChimerSeq ChiTaRs ChiTaRs COMP-SERPINA3 COMP chr19 18893982 SERPINA3 chr14 95085726 Exonic hg19 NA BQ181152 Out-of-frame Inter-chr p13.11 q32.13 120020 ChimerSeq ChiTaRs ChiTaRs BPTF-SMG1 BPTF chr17 65944305 SMG1 chr16 18820944 Exonic hg19 NA DB219627 Out-of-frame Inter-chr q24.2 Transcription factor p12.3 Atypical:PIKK 120021 ChimerSeq ChiTaRs ChiTaRs SUGP2-EIF4G2 SUGP2 chr19 19101810 EIF4G2 chr11 10818602 Exonic hg19 NA BP393537 Out-of-frame Inter-chr p13.11 p15.4 120022 ChimerSeq ChiTaRs ChiTaRs LUC7L3-MIA-RAB4B LUC7L3 chr17 48828940 MIA-RAB4B chr19 41284182 Exonic hg19 NA DB500866 Out-of-frame Inter-chr q21.33 q13.2 Tumor suppressor gene 120023 ChimerSeq ChiTaRs ChiTaRs HCST-TTC23 HCST chr19 36394763 TTC23 chr15 99768738 Exonic hg19 NA BM918971 Out-of-frame Inter-chr q13.12 q26.3 120024 ChimerSeq ChiTaRs ChiTaRs APLP2-EI24 APLP2 chr11 129939977 EI24 chr11 125442352 Exonic hg19 NA DB031430 5'UTR-5'UTR Intra-chr q24.3 q24.2 Tumor suppressor gene 120025 ChimerSeq ChiTaRs ChiTaRs CHGB-CYP17A1 CHGB chr20 5904341 CYP17A1 chr10 104596821 Exonic hg19 NA DA012276 In-Frame Inter-chr p12.3 q24.32 120026 ChimerSeq ChiTaRs ChiTaRs LYZ-MS4A7 LYZ chr12 69748014 MS4A7 chr11 60156882 Exonic hg19 NA CA310404 Out-of-frame Inter-chr q15 q12.2 120027 ChimerSeq ChiTaRs ChiTaRs AGBL1-SNX19 AGBL1 chr15 87167549 SNX19 chr11 130746591 Exonic hg19 NA AW387310 Out-of-frame Inter-chr q25.3 q25 120028 ChimerSeq ChiTaRs ChiTaRs RBPMS2-RBPMS2 RBPMS2 chr15 65033066 RBPMS2 chr15 65032939 Exonic hg19 NA BF855340 Out-of-frame Intra-chr q22.31 q22.31 120029 ChimerSeq ChiTaRs ChiTaRs MLEC-MLEC MLEC chr12 121139529 MLEC chr12 121139070 Exonic hg19 NA AA243990 Out-of-frame Intra-chr q24.31 q24.31 120030 ChimerSeq ChiTaRs ChiTaRs MKL2-PPP6R3 MKL2 chr16 14273089 PPP6R3 chr11 68334215 Exonic hg19 NA BI055250 Out-of-frame Inter-chr p13.12 q13.2 120031 ChimerSeq ChiTaRs ChiTaRs WNK4-MT1G WNK4 chr17 40939455 MT1G chr16 56701878 Exonic hg19 NA H91370 Out-of-frame Inter-chr q21.2 q13 Tumor suppressor gene 120032 ChimerSeq ChiTaRs ChiTaRs PLXNC1-TRIO PLXNC1 chr12 94671753 TRIO chr5 14361382 Exonic hg19 NA AW614030 Out-of-frame Inter-chr q22 Tumor suppressor gene p15.2 120033 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65267577 MALAT1 chr11 65266791 Exonic hg19 NA BG771150 Out-of-frame Intra-chr q13.1 q13.1 120034 ChimerSeq ChiTaRs ChiTaRs AKAP6-AKAP6 AKAP6 chr14 33075948 AKAP6 chr14 33075938 Exonic hg19 NA AA525900 Out-of-frame Intra-chr q12 q12 120035 ChimerSeq ChiTaRs ChiTaRs FBXO7-CCT8 FBXO7 chr22 32888879 CCT8 chr21 30432926 Exonic hg19 NA BG991440 Out-of-frame Inter-chr q12.3 q21.3 120036 ChimerSeq ChiTaRs ChiTaRs ANXA2-NARG2 ANXA2 chr15 60689484 NARG2 chr15 60715445 Exonic hg19 NA BF541040 Out-of-frame Intra-chr q22.2 120037 ChimerSeq ChiTaRs ChiTaRs C17orf89-ANKLE2 C17orf89 chr17 79213385 ANKLE2 chr12 133303761 Exonic hg19 NA AI682370 Out-of-frame Inter-chr q24.33 120038 ChimerSeq ChiTaRs ChiTaRs LOC100506844-LOC100506844 LOC100506844 chr12 58329695 LOC100506844 chr12 58329741 Exonic hg19 NA U47340 Out-of-frame Intra-chr 120039 ChimerSeq ChiTaRs ChiTaRs RNF43-STAG1 RNF43 chr17 56480228 STAG1 chr3 136056937 Exonic hg19 NA Z75330 Out-of-frame Inter-chr q22 Oncogene q22.3 120040 ChimerSeq ChiTaRs ChiTaRs STAT5A-BCL6 STAT5A chr17 40456686 BCL6 chr3 187461760 Exonic hg19 NA AJ557814 Out-of-frame Inter-chr q21.2 Tumor suppressor gene Transcription factor q27.3 Oncogene Transcription factor 120041 ChimerSeq ChiTaRs ChiTaRs SEPT9-SEPT9 2009_ 9_ 1_ chr17 75496153 2009_ 9_ 1_ chr17 75496147 Exonic hg19 NA BM471970 Out-of-frame Intra-chr 120042 ChimerSeq ChiTaRs ChiTaRs TUBA1C-VPS39 TUBA1C chr12 49667098 VPS39 chr15 42451247 Exonic hg19 NA BE907310 Out-of-frame Inter-chr q13.12 q15.1 120043 ChimerSeq ChiTaRs ChiTaRs TTC3-TTC3 TTC3 chr21 38459808 TTC3 chr21 38459556 Exonic hg19 NA BE939550 Out-of-frame Intra-chr q22.13 q22.13 120044 ChimerSeq ChiTaRs ChiTaRs HCK-ENG HCK chr20 30669795 ENG chr9 130588650 Exonic hg19 NA BI026800 Out-of-frame Inter-chr q11.21 TK:Src q34.11 120045 ChimerSeq ChiTaRs ChiTaRs BCL9L-PIP5K1C BCL9L chr11 118771681 PIP5K1C chr19 3633742 Exonic hg19 NA BF739320 Out-of-frame Inter-chr q23.3 p13.3 120046 ChimerSeq ChiTaRs ChiTaRs C19orf66-C19orf66 C19orf66 chr19 10200723 C19orf66 chr19 10196798 Exonic hg19 NA AU120300 Out-of-frame Intra-chr p13.2 p13.2 120047 ChimerSeq ChiTaRs ChiTaRs SERPINA3-SERPINA3 SERPINA3 chr14 95090193 SERPINA3 chr14 95090209 Exonic hg19 NA AW994810 Out-of-frame Intra-chr q32.13 q32.13 120048 ChimerSeq ChiTaRs ChiTaRs GDE1-COL9A3 GDE1 chr16 19533417 COL9A3 chr20 61461913 Exonic hg19 NA DA571660 Out-of-frame Inter-chr p12.3 q13.33 120049 ChimerSeq ChiTaRs ChiTaRs METTL16-METTL16 METTL16 chr17 2385935 METTL16 chr17 2404774 Exonic hg19 NA CV395950 Out-of-frame Intra-chr p13.3 p13.3 120050 ChimerSeq ChiTaRs ChiTaRs PIP4K2B-DGCR5 PIP4K2B chr17 36927527 DGCR5 chr22 19014309 Exonic hg19 NA AF130850 Out-of-frame Inter-chr q12 q11.21 120051 ChimerSeq ChiTaRs ChiTaRs PDXDC1-HS6ST2 PDXDC1 chr16 15130456 HS6ST2 chrX 132010123 Exonic hg19 NA BF993350 Out-of-frame Inter-chr p13.11 q26.2 120052 ChimerSeq ChiTaRs ChiTaRs CTC1-CORO6 CTC1 chr17 8146582 CORO6 chr17 27945472 Exonic hg19 NA DA183630 Out-of-frame Intra-chr p13.1 q11.2 120053 ChimerSeq ChiTaRs ChiTaRs EML2-FOXO1 EML2 chr19 46140321 FOXO1 chr13 41134711 Exonic hg19 NA BQ343820 Out-of-frame Inter-chr q13.32 q14.11 Oncogene Tumor suppressor gene Transcription factor 120054 ChimerSeq ChiTaRs ChiTaRs NEFH-NEFH NEFH chr22 29886959 NEFH chr22 29886044 Exonic hg19 NA BM699050 Out-of-frame Intra-chr q12.2 q12.2 120055 ChimerSeq ChiTaRs ChiTaRs GNAS-GNAS GNAS chr20 57485042 GNAS chr20 57485070 Exonic hg19 NA BE171170 Out-of-frame Intra-chr q13.32 Oncogene q13.32 Oncogene 120056 ChimerSeq ChiTaRs ChiTaRs MTA1-MTA1 MTA1 chr14 105930788 MTA1 chr14 105930806 Exonic hg19 NA BE159770 Out-of-frame Intra-chr q32.33 q32.33 120057 ChimerSeq ChiTaRs ChiTaRs ANAPC5-ANAPC5 ANAPC5 chr12 121770703 ANAPC5 chr12 121770059 Exonic hg19 NA AA425310 Out-of-frame Intra-chr q24.31 q24.31 120058 ChimerSeq ChiTaRs ChiTaRs TEP1-TEP1 TEP1 chr14 20850397 TEP1 chr14 20850490 Exonic hg19 NA BF588870 Out-of-frame Intra-chr q11.2 Tumor suppressor gene q11.2 Tumor suppressor gene 120059 ChimerSeq ChiTaRs ChiTaRs GSS-OASL GSS chr20 33516533 OASL chr12 121458641 Exonic hg19 NA AW376720 Out-of-frame Inter-chr q11.22 q24.31 120060 ChimerSeq ChiTaRs ChiTaRs HELZ-C7orf25 HELZ chr17 65070511 C7orf25 chr7 42948906 Exonic hg19 NA BG291710 Out-of-frame Inter-chr q24.2 p14.1 120061 ChimerSeq ChiTaRs ChiTaRs CALR-CALR CALR chr19 13054416 CALR chr19 13054525 Exonic hg19 NA BE763150 Out-of-frame Intra-chr p13.13 p13.13 120062 ChimerSeq ChiTaRs ChiTaRs ABCC1-FAM105A ABCC1 chr16 16089541 FAM105A chr5 14607545 Exonic hg19 NA BG982650 Out-of-frame Inter-chr p15.2 120063 ChimerSeq ChiTaRs ChiTaRs FTO-KIAA0430 FTO chr16 54003602 KIAA0430 chr16 15713204 Exonic hg19 NA AW812420 Out-of-frame Intra-chr q12.2 120064 ChimerSeq ChiTaRs ChiTaRs STK24-KDM4B STK24 chr13 99116027 KDM4B chr19 5151703 Exonic hg19 NA AW957150 Out-of-frame Inter-chr q32.2 p13.3 120065 ChimerSeq ChiTaRs ChiTaRs UBE2O-UBE2O UBE2O chr17 74392604 UBE2O chr17 74392875 Exonic hg19 NA BE928410 Out-of-frame Intra-chr q25.1 q25.1 120066 ChimerSeq ChiTaRs ChiTaRs FRY-TMEM127 FRY chr13 32861063 TMEM127 chr2 96916882 Exonic hg19 NA BM311860 Out-of-frame Inter-chr q13.1 q11.2 Tumor suppressor gene 120067 ChimerSeq ChiTaRs ChiTaRs KPNB1-KALRN KPNB1 chr17 45727492 KALRN chr3 123976610 Exonic hg19 NA CN287140 Out-of-frame Inter-chr q21.32 q21.1 120068 ChimerSeq ChiTaRs ChiTaRs TPM4-SEC62 TPM4 chr19 16197279 SEC62 chr3 169700595 Exonic hg19 NA DA713220 Out-of-frame Inter-chr p13.12 q26.2 120069 ChimerSeq ChiTaRs ChiTaRs UBAC2-UBAC2 UBAC2 chr13 100037820 UBAC2 chr13 100037789 Exonic hg19 NA BF917910 Out-of-frame Intra-chr q32.3 q32.3 120070 ChimerSeq ChiTaRs ChiTaRs CYP19A1-CYP19A1 CYP19A1 chr15 51547947 CYP19A1 chr15 51520018 Exonic hg19 NA BF367260 Out-of-frame Intra-chr q21.2 q21.2 120071 ChimerSeq ChiTaRs ChiTaRs CALM3-TROVE2 CALM3 chr19 47113304 TROVE2 chr1 193057032 Exonic hg19 NA BQ327040 Out-of-frame Inter-chr q13.32 q31.2 120072 ChimerSeq ChiTaRs ChiTaRs SLC37A1-H19 SLC37A1 chr21 43985778 H19 chr11 2018192 Exonic hg19 NA BG008580 Out-of-frame Inter-chr q22.3 p15.5 Tumor suppressor gene 120073 ChimerSeq ChiTaRs ChiTaRs SETBP1-HNRNPM SETBP1 chr18 42514883 HNRNPM chr19 8548951 Exonic hg19 NA BF854890 Out-of-frame Inter-chr q12.3 Oncogene Transcription factor p13.2 120074 ChimerSeq ChiTaRs ChiTaRs DDT-AKAP13 DDT chr22 24313764 AKAP13 chr15 86291625 Exonic hg19 NA AI289930 Out-of-frame Inter-chr q25.3 120075 ChimerSeq ChiTaRs ChiTaRs CNP-TMEM63A CNP chr17 40126629 TMEM63A chr1 226054568 Exonic hg19 NA BF932710 Out-of-frame Inter-chr q21.2 q42.12 120076 ChimerSeq ChiTaRs ChiTaRs UBTF-UBTF UBTF chr17 42298289 UBTF chr17 42283961 Exonic hg19 NA X53390 Out-of-frame Intra-chr q21.31 q21.31 120077 ChimerSeq ChiTaRs ChiTaRs ZNF587-EML4 ZNF587 chr19 58328473 EML4 chr2 42419365 Exonic hg19 NA BF929270 Out-of-frame Inter-chr q13.43 Transcription factor p21 Oncogene 120078 ChimerSeq ChiTaRs ChiTaRs NAGLU-HIP1R NAGLU chr17 40696179 HIP1R chr12 123338587 Exonic hg19 NA AB209530 Out-of-frame Inter-chr q21.2 q24.31 120079 ChimerSeq ChiTaRs ChiTaRs CNN2-WAC CNN2 chr19 1039064 WAC chr10 28907505 Exonic hg19 NA BQ004560 3'UTR-CDS Inter-chr p13.3 p12.1 120080 ChimerSeq ChiTaRs ChiTaRs TRIM28-TRIM28 TRIM28 chr19 59062013 TRIM28 chr19 59061135 Exonic hg19 NA CN422430 Out-of-frame Intra-chr q13.43 q13.43 120081 ChimerSeq ChiTaRs ChiTaRs VASH1-ZNF550 VASH1 chr14 77248132 ZNF550 chr19 58067569 Exonic hg19 NA AA977090 Out-of-frame Inter-chr q24.3 q13.43 Transcription factor 120082 ChimerSeq ChiTaRs ChiTaRs ADPGK-ADPGK ADPGK chr15 73044426 ADPGK chr15 73044457 Exonic hg19 NA BM728660 Out-of-frame Intra-chr q24.1 q24.1 120083 ChimerSeq ChiTaRs ChiTaRs ERGIC3-ERGIC3 ERGIC3 chr20 34135219 ERGIC3 chr20 34143985 Exonic hg19 NA BI039060 Out-of-frame Intra-chr q11.22 q11.22 120084 ChimerSeq ChiTaRs ChiTaRs ACSBG2-SLC14A2 ACSBG2 chr19 6193105 SLC14A2 chr18 43063380 Exonic hg19 NA AA868830 Out-of-frame Inter-chr p13.3 q12.3 120085 ChimerSeq ChiTaRs ChiTaRs C3-FURIN C3 chr19 6677984 FURIN chr15 91425918 Exonic hg19 NA CB163740 Out-of-frame Inter-chr p13.3 q26.1 120086 ChimerSeq ChiTaRs ChiTaRs RPRD1B-NOL3 RPRD1B chr20 36717064 NOL3 chr16 67205448 Exonic hg19 NA BI053870 Out-of-frame Inter-chr q11.23 q22.1 120087 ChimerSeq ChiTaRs ChiTaRs SPINT1-C7orf49 SPINT1 chr15 41146033 C7orf49 chr7 134850846 Exonic hg19 NA BI004880 Out-of-frame Inter-chr q15.1 q33 120088 ChimerSeq ChiTaRs ChiTaRs XPO6-XPO6 XPO6 chr16 28157483 XPO6 chr16 28157437 Exonic hg19 NA BF353460 Out-of-frame Intra-chr p12.1 p12.1 120089 ChimerSeq ChiTaRs ChiTaRs B2M-EEF1D B2M chr15 45003812 EEF1D chr8 144674959 Exonic hg19 NA BG545390 Out-of-frame Inter-chr Oncogene 120090 ChimerSeq ChiTaRs ChiTaRs SNAP25-SNAP25 SNAP25 chr20 10287360 SNAP25 chr20 10287483 Exonic hg19 NA AW898620 Out-of-frame Intra-chr p12.2 p12.2 120091 ChimerSeq ChiTaRs ChiTaRs MGA-MGA MGA chr15 42060165 MGA chr15 42040931 Exonic hg19 NA AV747640 Out-of-frame Intra-chr q15.1 Transcription factor q15.1 Transcription factor 120092 ChimerSeq ChiTaRs ChiTaRs KRT13-KRT13 KRT13 chr17 39657838 KRT13 chr17 39657595 Exonic hg19 NA CV314810 Out-of-frame Intra-chr q21.2 q21.2 120093 ChimerSeq ChiTaRs ChiTaRs GAPDH-RPN2 GAPDH chr12 6647537 RPN2 chr20 35857110 Exonic hg19 NA BC009430 3'UTR-CDS Inter-chr p13.31 q11.23 120094 ChimerSeq ChiTaRs ChiTaRs DYNC1LI2-PLXNA2 DYNC1LI2 chr16 66765479 PLXNA2 chr1 208335134 Exonic hg19 NA BF370830 Out-of-frame Inter-chr q22.1 q32.2 120095 ChimerSeq ChiTaRs ChiTaRs JAG1-HOOK3 JAG1 chr20 10640788 HOOK3 chr8 42752274 Exonic hg19 NA AF241830 Out-of-frame Inter-chr p12.2 p11.21 Oncogene 120096 ChimerSeq ChiTaRs ChiTaRs CHD2-OTUD5 CHD2 chr15 93540649 OTUD5 chrX 48780479 Exonic hg19 NA BF852660 Out-of-frame Inter-chr q26.1 p11.23 120097 ChimerSeq ChiTaRs ChiTaRs GPN3-SRSF2 GPN3 chr12 110899217 SRSF2 chr17 74730197 Exonic hg19 NA BC063570 Out-of-frame Inter-chr q24.11 q25.1 Oncogene 120098 ChimerSeq ChiTaRs ChiTaRs FXYD5-TSKU FXYD5 chr19 35649295 TSKU chr11 76508711 Exonic hg19 NA BG982440 Out-of-frame Inter-chr q13.12 q13.5 120099 ChimerSeq ChiTaRs ChiTaRs FAU-BAD FAU chr11 64888479 BAD chr11 64037652 Exonic hg19 NA BG472330 Out-of-frame Intra-chr q13.1 q13.1 120100 ChimerSeq ChiTaRs ChiTaRs PTPRM-PTPRM PTPRM chr18 8406534 PTPRM chr18 8370944 Exonic hg19 NA W27760 Out-of-frame Intra-chr p11.23 p11.23 120101 ChimerSeq ChiTaRs ChiTaRs TRAPPC10-GCNT2 TRAPPC10 chr21 45526171 GCNT2 chr6 10532979 Exonic hg19 NA R01820 Out-of-frame Inter-chr q22.3 p24.3 120102 ChimerSeq ChiTaRs ChiTaRs FUK-PARD3 FUK chr16 70511468 PARD3 chr10 34682029 Exonic hg19 NA BE147710 Out-of-frame Inter-chr q22.1 p11.21 120103 ChimerSeq ChiTaRs ChiTaRs FCHSD2-CYP27C1 FCHSD2 chr11 72657678 CYP27C1 chr2 127947135 Exonic hg19 NA CK430650 Out-of-frame Inter-chr q13.4 q14.3 120104 ChimerSeq ChiTaRs ChiTaRs CMTM4-RGMA CMTM4 chr16 66672250 RGMA chr15 93588793 Exonic hg19 NA BF932730 Out-of-frame Inter-chr q22.1 q26.1 120105 ChimerSeq ChiTaRs ChiTaRs ATP9A-ATP9A ATP9A chr20 50307360 ATP9A chr20 50273476 Exonic hg19 NA BF933640 Out-of-frame Intra-chr q13.2 q13.2 120106 ChimerSeq ChiTaRs ChiTaRs KRT86-NCL KRT86 chr12 52679752 NCL chr2 232323015 Exonic hg19 NA CA419460 Out-of-frame Inter-chr q13.13 q37.1 120107 ChimerSeq ChiTaRs ChiTaRs DLGAP4-DLGAP4 DLGAP4 chr20 35156657 DLGAP4 chr20 35156623 Exonic hg19 NA BM712550 Out-of-frame Intra-chr q11.23 q11.23 120108 ChimerSeq ChiTaRs ChiTaRs IQCK-IQCK IQCK chr16 19741816 IQCK chr16 19745027 Exonic hg19 NA BI520470 Out-of-frame Intra-chr p12.3 p12.3 120109 ChimerSeq ChiTaRs ChiTaRs PARN-GOLPH3 PARN chr16 14705648 GOLPH3 chr5 32126215 Exonic hg19 NA AW857210 Out-of-frame Inter-chr p13.3 120110 ChimerSeq ChiTaRs ChiTaRs SNRPN-SNRPN SNRPN chr15 25584344 SNRPN chr15 25583678 Exonic hg19 NA BU686050 Out-of-frame Intra-chr q11.2 q11.2 120111 ChimerSeq ChiTaRs ChiTaRs TYMS-TGIF2-C20orf24 TYMS chr18 668859 TGIF2-C20orf24 chr20 35240288 Exonic hg19 NA AW878210 Out-of-frame Inter-chr p11.32 q11.23 Transcription factor 120112 ChimerSeq ChiTaRs ChiTaRs TRAPPC10-TRAPPC10 TRAPPC10 chr21 45525103 TRAPPC10 chr21 45525057 Exonic hg19 NA BQ934030 Out-of-frame Intra-chr q22.3 q22.3 120113 ChimerSeq ChiTaRs ChiTaRs ZNF207-TNKS1BP1 ZNF207 chr17 30700610 TNKS1BP1 chr11 57074938 Exonic hg19 NA BF812770 Out-of-frame Inter-chr q11.2 Transcription factor q12.1 120114 ChimerSeq ChiTaRs ChiTaRs ZC3H4-ZC3H4 ZC3H4 chr19 47567752 ZC3H4 chr19 47567444 Exonic hg19 NA CK299870 Out-of-frame Intra-chr q13.32 q13.32 120115 ChimerSeq ChiTaRs ChiTaRs NDC80-NDC80 NDC80 chr18 2616634 NDC80 chr18 2610751 Exonic hg19 NA CA311030 3'UTR-CDS Intra-chr p11.32 p11.32 120116 ChimerSeq ChiTaRs ChiTaRs ST3GAL4-LPAR2 ST3GAL4 chr11 126293714 LPAR2 chr19 19738247 Exonic hg19 NA DA524650 Out-of-frame Inter-chr q24.2 p13.11 120117 ChimerSeq ChiTaRs ChiTaRs RIMKLB-DNAJC27-AS1 RIMKLB chr12 8928224 DNAJC27-AS1 chr2 25259721 Exonic hg19 NA CN430650 Out-of-frame Inter-chr p13.31 p23.3 120118 ChimerSeq ChiTaRs ChiTaRs AES-AES AES chr19 3053548 AES chr19 3053932 Exonic hg19 NA AA356820 Out-of-frame Intra-chr p13.3 p13.3 120119 ChimerSeq ChiTaRs ChiTaRs JAM3-JAM3 JAM3 chr11 134021523 JAM3 chr11 134021225 Exonic hg19 NA AA603550 Out-of-frame Intra-chr q25 q25 120120 ChimerSeq ChiTaRs ChiTaRs FKBP8-MEGF8 FKBP8 chr19 18642640 MEGF8 chr19 42880188 Exonic hg19 NA BU684410 Out-of-frame Intra-chr p13.11 q13.2 120121 ChimerSeq ChiTaRs ChiTaRs SLC25A3-LAMB1 SLC25A3 chr12 98991808 LAMB1 chr7 107564262 Exonic hg19 NA CN410000 Out-of-frame Inter-chr q23.1 q31.1 120122 ChimerSeq ChiTaRs ChiTaRs MT1A-CABYR MT1A chr16 56652730 CABYR chr18 21735890 Exonic hg19 NA AI638690 Out-of-frame Inter-chr q13 q11.2 120123 ChimerSeq ChiTaRs ChiTaRs KIAA0930-KIAA0930 KIAA0930 chr22 45595866 KIAA0930 chr22 45601525 Exonic hg19 NA BF229170 Out-of-frame Intra-chr q13.31 q13.31 120124 ChimerSeq ChiTaRs ChiTaRs DDX24-SYN3 DDX24 chr14 94545863 SYN3 chr22 33255305 Exonic hg19 NA W51830 Out-of-frame Inter-chr q12.3 120125 ChimerSeq ChiTaRs ChiTaRs GART-FCHO2 GART chr21 34887528 FCHO2 chr5 72359704 Exonic hg19 NA BF763230 Out-of-frame Inter-chr q13.2 120126 ChimerSeq ChiTaRs ChiTaRs CDC16-CDC16 CDC16 chr13 115038131 CDC16 chr13 115037740 Exonic hg19 NA AA229050 Out-of-frame Intra-chr q34 q34 120127 ChimerSeq ChiTaRs ChiTaRs DDX24-RARRES1 DDX24 chr14 94545960 RARRES1 chr3 158434951 Exonic hg19 NA R64730 Out-of-frame Inter-chr q25.32 120128 ChimerSeq ChiTaRs ChiTaRs GIPC1-RAPGEF1 GIPC1 chr19 14588887 RAPGEF1 chr9 134587552 Exonic hg19 NA BG003110 Out-of-frame Inter-chr p13.12 q34.13 120129 ChimerSeq ChiTaRs ChiTaRs G2E3-UBR3 G2E3 chr14 31086848 UBR3 chr2 170775185 Exonic hg19 NA AV751440 Out-of-frame Inter-chr q12 q31.1 120130 ChimerSeq ChiTaRs ChiTaRs MICAL3-PPT1 MICAL3 chr22 18410724 PPT1 chr1 40539664 Exonic hg19 NA BE837830 Out-of-frame Inter-chr q11.21 p34.2 120131 ChimerSeq ChiTaRs ChiTaRs RNF111-RNF111 RNF111 chr15 59388158 RNF111 chr15 59386987 Exonic hg19 NA BP221100 Out-of-frame Intra-chr q22.1 Tumor suppressor gene q22.1 Tumor suppressor gene 120132 ChimerSeq ChiTaRs ChiTaRs NOL3-NOL3 NOL3 chr16 67209626 NOL3 chr16 67209298 Exonic hg19 NA CB052170 Out-of-frame Intra-chr q22.1 q22.1 120133 ChimerSeq ChiTaRs ChiTaRs LCP1-SLC4A10 LCP1 chr13 46725093 SLC4A10 chr2 162661287 Exonic hg19 NA BG392690 Out-of-frame Inter-chr q14.13 q24.2 120134 ChimerSeq ChiTaRs ChiTaRs CLEC18A-AMPD3 CLEC18A chr16 70152597 AMPD3 chr11 10518039 Exonic hg19 NA BI027290 Out-of-frame Inter-chr q22.1 p15.4 120135 ChimerSeq ChiTaRs ChiTaRs ABCA3-ABCA3 ABCA3 chr16 2383328 ABCA3 chr16 2383230 Exonic hg19 NA AW894220 Out-of-frame Intra-chr p13.3 p13.3 120136 ChimerSeq ChiTaRs ChiTaRs ADRM1-VEPH1 ADRM1 chr20 60883918 VEPH1 chr3 157217046 Exonic hg19 NA BI014390 3'UTR-5'UTR Inter-chr q13.33 q25.32 120137 ChimerSeq ChiTaRs ChiTaRs STRADA-AGBL4 STRADA chr17 61780620 AGBL4 chr1 50482935 Exonic hg19 NA BF852160 Out-of-frame Inter-chr q23.3 Tumor suppressor gene p33 120138 ChimerSeq ChiTaRs ChiTaRs MYH9-MYH9 MYH9 chr22 36697043 MYH9 chr22 36684833 Exonic hg19 NA CR992140 Out-of-frame Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Oncogene Tumor suppressor gene 120139 ChimerSeq ChiTaRs ChiTaRs NDUFV1-YEATS2 NDUFV1 chr11 67378650 YEATS2 chr3 183483217 Exonic hg19 NA BQ371210 Out-of-frame Inter-chr q13.2 q27.1 120140 ChimerSeq ChiTaRs ChiTaRs CYTH1-CYTH1 CYTH1 chr17 76675709 CYTH1 chr17 76671426 Exonic hg19 NA BI011190 Out-of-frame Intra-chr q25.3 q25.3 120141 ChimerSeq ChiTaRs ChiTaRs IST1-PRCP IST1 chr16 71958065 PRCP chr11 82535843 Exonic hg19 NA BE767730 Out-of-frame Inter-chr q22.2 q14.1 120142 ChimerSeq ChiTaRs ChiTaRs WDR7-XRCC5 WDR7 chr18 54483385 XRCC5 chr2 217005908 Exonic hg19 NA BE709280 Out-of-frame Inter-chr q21.31 q35 Tumor suppressor gene 120143 ChimerSeq ChiTaRs ChiTaRs SF1-SF1 SF1 chr11 64537077 SF1 chr11 64535144 Exonic hg19 NA BG987940 Out-of-frame Intra-chr q13.1 q13.1 120144 ChimerSeq ChiTaRs ChiTaRs PAPD5-PAPD5 PAPD5 chr16 50263278 PAPD5 chr16 50258871 Exonic hg19 NA AA149560 Out-of-frame Intra-chr q12.1 q12.1 120145 ChimerSeq ChiTaRs ChiTaRs N4BP2L1-N4BP2L1 N4BP2L1 chr13 33002315 N4BP2L1 chr13 32999584 Exonic hg19 NA BE670660 5'UTR-CDS Intra-chr q13.1 q13.1 120146 ChimerSeq ChiTaRs ChiTaRs IRX3-TP53INP1 IRX3 chr16 54318197 TP53INP1 chr8 95938474 Exonic hg19 NA BU675700 Out-of-frame Inter-chr q12.2 Transcription factor q22.1 Tumor suppressor gene 120147 ChimerSeq ChiTaRs ChiTaRs SLC39A6-GLT1D1 SLC39A6 chr18 33689944 GLT1D1 chr12 129431883 Exonic hg19 NA AW888610 Out-of-frame Inter-chr q12.2 q24.33 120148 ChimerSeq ChiTaRs ChiTaRs C12orf10-C12orf10 C12orf10 chr12 53700957 C12orf10 chr12 53693634 Exonic hg19 NA CB046470 Out-of-frame Intra-chr q13.13 q13.13 120149 ChimerSeq ChiTaRs ChiTaRs MYH9-MYH9 MYH9 chr22 36685323 MYH9 chr22 36684850 Exonic hg19 NA BF081780 Out-of-frame Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Oncogene Tumor suppressor gene 120150 ChimerSeq ChiTaRs ChiTaRs ACSBG2-IGFBP5 ACSBG2 chr19 6138285 IGFBP5 chr2 217539795 Exonic hg19 NA AI939380 Out-of-frame Inter-chr p13.3 q35 Tumor suppressor gene 120151 ChimerSeq ChiTaRs ChiTaRs MAP4K5-MAP4K5 MAP4K5 chr14 50886146 MAP4K5 chr14 50885474 Exonic hg19 NA BG390240 Out-of-frame Intra-chr q22.1 q22.1 120152 ChimerSeq ChiTaRs ChiTaRs PDXK-RAD9A PDXK chr21 45179896 RAD9A chr11 67165211 Exonic hg19 NA BF916410 Out-of-frame Inter-chr q22.3 q13.2 120153 ChimerSeq ChiTaRs ChiTaRs ZNF266-MECOM ZNF266 chr19 9524348 MECOM chr3 169326285 Exonic hg19 NA BF917110 Out-of-frame Inter-chr p13.2 Transcription factor q26.2 Transcription factor 120154 ChimerSeq ChiTaRs ChiTaRs SPATA8-PDE3B SPATA8 chr15 97328836 PDE3B chr11 14666444 Exonic hg19 NA AI969380 Out-of-frame Inter-chr q26.2 p15.2 120155 ChimerSeq ChiTaRs ChiTaRs NUCB1-NUCB1 NUCB1 chr19 49426280 NUCB1 chr19 49416781 Exonic hg19 NA BG829250 Out-of-frame Intra-chr q13.33 q13.33 120156 ChimerSeq ChiTaRs ChiTaRs XAF1-SLC8A1 XAF1 chr17 6678924 SLC8A1 chr2 40655370 Exonic hg19 NA BF986040 Out-of-frame Inter-chr p13.1 Tumor suppressor gene p22.1 120157 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65267648 MALAT1 chr11 65266832 Exonic hg19 NA CB265780 Out-of-frame Intra-chr q13.1 q13.1 120158 ChimerSeq ChiTaRs ChiTaRs PLCB2-PLCB2 PLCB2 chr15 40586565 PLCB2 chr15 40586570 Exonic hg19 NA BF874520 Out-of-frame Intra-chr q15.1 q15.1 120159 ChimerSeq ChiTaRs ChiTaRs FLI1-EWSR1 FLI1 chr11 128667041 EWSR1 chr22 29684818 Exonic hg19 NA JX266510 Out-of-frame Inter-chr q24.3 Oncogene Transcription factor q12.2 KB Pub 120160 ChimerSeq ChiTaRs ChiTaRs MIR100HG-GAN MIR100HG chr11 122033430 GAN chr16 81365502 Exonic hg19 NA AK001100 Out-of-frame Inter-chr q24.1 q23.2 120161 ChimerSeq ChiTaRs ChiTaRs HN1L-FMR1 HN1L chr16 1749663 FMR1 chrX 147026471 Exonic hg19 NA BF083070 Out-of-frame Inter-chr q27.3 120162 ChimerSeq ChiTaRs ChiTaRs NDE1-NDE1 NDE1 chr16 15802694 NDE1 chr16 15797691 Exonic hg19 NA AA516440 Out-of-frame Intra-chr p13.11 p13.11 120163 ChimerSeq ChiTaRs ChiTaRs SPINT2-ADORA2B SPINT2 chr19 38782554 ADORA2B chr17 15853703 Exonic hg19 NA BF931290 Out-of-frame Inter-chr q13.2 Tumor suppressor gene p12 120164 ChimerSeq ChiTaRs ChiTaRs FAM118A-ESPL1 FAM118A chr22 45732948 ESPL1 chr12 53679941 Exonic hg19 NA AL046060 Out-of-frame Inter-chr q13.31 q13.13 120165 ChimerSeq ChiTaRs ChiTaRs STX16-NEDD4L STX16 chr20 57236433 NEDD4L chr18 56065113 Exonic hg19 NA BF378130 Out-of-frame Inter-chr q13.32 q21.31 Tumor suppressor gene 120166 ChimerSeq ChiTaRs ChiTaRs ZNRF3-ZNRF3 ZNRF3 chr22 29358665 ZNRF3 chr22 29358899 Exonic hg19 NA BF331840 Out-of-frame Intra-chr q12.1 q12.1 120167 ChimerSeq ChiTaRs ChiTaRs EP400-UCP2 EP400 chr12 132466889 UCP2 chr11 73688931 Exonic hg19 NA BF763210 Out-of-frame Inter-chr q24.33 Oncogene q13.4 120168 ChimerSeq ChiTaRs ChiTaRs ATP6V0A1-ATP5J2-PTCD1 ATP6V0A1 chr17 40674597 ATP5J2-PTCD1 chr7 99057153 Exonic hg19 NA BM991690 Out-of-frame Inter-chr q21.2 q22.1 120169 ChimerSeq ChiTaRs ChiTaRs SUPT6H-APOB SUPT6H chr17 27029248 APOB chr2 21234785 Exonic hg19 NA AI052800 Out-of-frame Inter-chr q11.2 p24.1 120170 ChimerSeq ChiTaRs ChiTaRs MALAT1-PLCL1 MALAT1 chr11 65268183 PLCL1 chr2 198907251 Exonic hg19 NA BF750590 Out-of-frame Inter-chr q13.1 q33.1 120171 ChimerSeq ChiTaRs ChiTaRs UQCRC2-UQCRC2 UQCRC2 chr16 21994679 UQCRC2 chr16 21994458 Exonic hg19 NA AW089520 Out-of-frame Intra-chr 120172 ChimerSeq ChiTaRs ChiTaRs TPI1-PFKL TPI1 chr12 6979964 PFKL chr21 45747008 Exonic hg19 NA AF086180 Out-of-frame Inter-chr p13.31 q22.3 120173 ChimerSeq ChiTaRs ChiTaRs LSM12-ATP5S LSM12 chr17 42131783 ATP5S chr14 50796842 Exonic hg19 NA AW608430 Out-of-frame Inter-chr q21.31 q21.3 120174 ChimerSeq ChiTaRs ChiTaRs ARL17A-STEAP4 ARL17A chr17 1207375 STEAP4 chr7 87906565 Exonic hg19 NA BG679330 Out-of-frame Inter-chr q21.31 q21.12 120175 ChimerSeq ChiTaRs ChiTaRs MYH11-SNX29 MYH11 chr16 15849370 SNX29 chr16 12363674 Exonic hg19 NA BF917080 Out-of-frame Intra-chr Oncogene p13.13 120176 ChimerSeq ChiTaRs ChiTaRs COASY-COASY COASY chr17 40716794 COASY chr17 40716816 Exonic hg19 NA BG120370 Out-of-frame Intra-chr q21.2 q21.2 120177 ChimerSeq ChiTaRs ChiTaRs PIGS-PIGS PIGS chr17 26881492 PIGS chr17 26888521 Exonic hg19 NA W00580 Out-of-frame Intra-chr q11.2 q11.2 120178 ChimerSeq ChiTaRs ChiTaRs NEMF-ST3GAL1 NEMF chr14 50256016 ST3GAL1 chr8 134468265 Exonic hg19 NA BI005060 Out-of-frame Inter-chr q21.3 q24.22 120179 ChimerSeq ChiTaRs ChiTaRs FAM210B-FAM210B FAM210B chr20 54943532 FAM210B chr20 54943511 Exonic hg19 NA R58190 Out-of-frame Intra-chr q13.2 q13.2 120180 ChimerSeq ChiTaRs ChiTaRs SEC14L6-NCKIPSD SEC14L6 chr22 30938621 NCKIPSD chr3 48719019 Exonic hg19 NA BI553600 Out-of-frame Inter-chr q12.2 p21.31 120181 ChimerSeq ChiTaRs ChiTaRs LYZ-AFF1 LYZ chr12 69748013 AFF1 chr4 87890251 Exonic hg19 NA DB348190 3'UTR-CDS Inter-chr q15 q21.3 Oncogene 120182 ChimerSeq ChiTaRs ChiTaRs PHACTR3-IGDCC4 PHACTR3 chr20 58312882 IGDCC4 chr15 65713341 Exonic hg19 NA CV342350 Out-of-frame Inter-chr q13.32 q22.31 120183 ChimerSeq ChiTaRs ChiTaRs APOBEC3C-MGRN1 APOBEC3C chr22 39414828 MGRN1 chr16 4740138 Exonic hg19 NA BF926540 Out-of-frame Inter-chr q13.1 p13.3 120184 ChimerSeq ChiTaRs ChiTaRs HNF1B-HNF1B HNF1B chr17 36102128 HNF1B chr17 36102147 Exonic hg19 NA CR745050 Out-of-frame Intra-chr q12 Transcription factor q12 Transcription factor 120185 ChimerSeq ChiTaRs ChiTaRs RMI2-MIPEP RMI2 chr16 11370061 MIPEP chr13 24375503 Exonic hg19 NA DB341880 Out-of-frame Inter-chr p13.13 q12.12 120186 ChimerSeq ChiTaRs ChiTaRs CALR-CALR CALR chr19 13050316 CALR chr19 13050325 Exonic hg19 NA D83840 Out-of-frame Intra-chr p13.13 p13.13 120187 ChimerSeq ChiTaRs ChiTaRs NEAT1-ALDH3A2 NEAT1 chr11 65194684 ALDH3A2 chr17 19566989 Exonic hg19 NA BF854270 Out-of-frame Inter-chr q13.1 p11.2 120188 ChimerSeq ChiTaRs ChiTaRs SAFB2-SAFB2 SAFB2 chr19 5593438 SAFB2 chr19 5593267 Exonic hg19 NA BI063780 Out-of-frame Intra-chr p13.3 Tumor suppressor gene Transcription factor p13.3 Tumor suppressor gene Transcription factor 120189 ChimerSeq ChiTaRs ChiTaRs CDK5RAP3-NCAPD3 CDK5RAP3 chr17 46053273 NCAPD3 chr11 134029879 Exonic hg19 NA AW819720 Out-of-frame Inter-chr q21.32 q25 120190 ChimerSeq ChiTaRs ChiTaRs R3HDML-DIAPH3 R3HDML chr20 42973885 DIAPH3 chr13 60411837 Exonic hg19 NA BF335440 Out-of-frame Inter-chr q13.12 q21.2 120191 ChimerSeq ChiTaRs ChiTaRs TBCD-TBCD TBCD chr17 80731506 TBCD chr17 80732972 Exonic hg19 NA AI205530 Out-of-frame Intra-chr 120192 ChimerSeq ChiTaRs ChiTaRs HNRNPL-HNRNPL HNRNPL chr19 39332850 HNRNPL chr19 39331798 Exonic hg19 NA AI800860 Out-of-frame Intra-chr 120193 ChimerSeq ChiTaRs ChiTaRs CBFB-NDE1 CBFB chr16 67120259 NDE1 chr16 15814715 Exonic hg19 NA AF390859 Out-of-frame Intra-chr q22.1 p13.11 120194 ChimerSeq ChiTaRs ChiTaRs CHKA-NDUFAF4 CHKA chr11 67833139 NDUFAF4 chr6 97339050 Exonic hg19 NA AW997590 Out-of-frame Inter-chr q13.2 q16.1 120195 ChimerSeq ChiTaRs ChiTaRs CKAP4-CKAP4 CKAP4 chr12 106633435 CKAP4 chr12 106633391 Exonic hg19 NA BF802120 Out-of-frame Intra-chr q23.3 q23.3 120196 ChimerSeq ChiTaRs ChiTaRs GABPA-ALB GABPA chr21 27142279 ALB chr4 74277769 Exonic hg19 NA AF119890 Out-of-frame Inter-chr q21.3 Transcription factor q13.3 120197 ChimerSeq ChiTaRs ChiTaRs MPST-WAS MPST chr22 37425839 WAS chrX 48547792 Exonic hg19 NA CB164510 Out-of-frame Inter-chr q12.3 p11.23 Oncogene 120198 ChimerSeq ChiTaRs ChiTaRs ARIH1-EPB41L1 ARIH1 chr15 72878896 EPB41L1 chr20 34818002 Exonic hg19 NA BE219900 3'UTR-3'UTR Inter-chr q24.1 q11.23 120199 ChimerSeq ChiTaRs ChiTaRs IZUMO1-MYADM IZUMO1 chr19 49245404 MYADM chr19 54376851 Exonic hg19 NA BI045770 Out-of-frame Intra-chr q13.33 q13.42 120200 ChimerSeq ChiTaRs ChiTaRs SNRPD2-COL24A1 SNRPD2 chr19 46195172 COL24A1 chr1 86520571 Exonic hg19 NA BI868400 Out-of-frame Inter-chr q13.32 p22.3 120201 ChimerSeq ChiTaRs ChiTaRs CIC-CIC CIC chr19 42798196 CIC chr19 42798195 Exonic hg19 NA BG820250 Out-of-frame Intra-chr q13.2 Oncogene Tumor suppressor gene Transcription factor q13.2 Oncogene Tumor suppressor gene Transcription factor 120202 ChimerSeq ChiTaRs ChiTaRs CSTL1-TNS3 CSTL1 chr20 23421451 TNS3 chr7 47364287 Exonic hg19 NA BI544560 Out-of-frame Inter-chr p11.21 p12.3 120203 ChimerSeq ChiTaRs ChiTaRs IER3IP1-IER3IP1 IER3IP1 chr18 44702722 IER3IP1 chr18 44681475 Exonic hg19 NA AF125100 Out-of-frame Intra-chr q21.1 q21.1 120204 ChimerSeq ChiTaRs ChiTaRs NPIPB7-ATP10B NPIPB7 chr16 29385597 ATP10B chr5 160100539 Exonic hg19 NA BX648280 Out-of-frame Inter-chr p12.1 q34 120205 ChimerSeq ChiTaRs ChiTaRs DGAT2-TMBIM6 DGAT2 chr11 75512579 TMBIM6 chr12 50158116 Exonic hg19 NA AA694250 Out-of-frame Inter-chr q13.5 q13.12 120206 ChimerSeq ChiTaRs ChiTaRs SLC39A11-WBSCR17 SLC39A11 chr17 70949964 WBSCR17 chr7 71130394 Exonic hg19 NA DA178830 Out-of-frame Inter-chr q25.1 q11.22 120207 ChimerSeq ChiTaRs ChiTaRs TPP2-TPP2 TPP2 chr13 103331395 TPP2 chr13 103331368 Exonic hg19 NA BF794140 Out-of-frame Intra-chr q33.1 q33.1 120208 ChimerSeq ChiTaRs ChiTaRs PEX5-PLP2 PEX5 chr12 7362676 PLP2 chrX 49028235 Exonic hg19 NA BQ231050 Out-of-frame Inter-chr p13.31 p11.23 120209 ChimerSeq ChiTaRs ChiTaRs MTHFD1-LOC100505782 MTHFD1 chr14 64887081 LOC100505782 chr17 39565582 Exonic hg19 NA BG955100 Out-of-frame Inter-chr q23.3 120210 ChimerSeq ChiTaRs ChiTaRs KSR1-KSR1 KSR1 chr17 25953359 KSR1 chr17 25950397 Exonic hg19 NA AA999960 Out-of-frame Intra-chr q11.2 TKL:RAF q11.2 TKL:RAF 120211 ChimerSeq ChiTaRs ChiTaRs MPHOSPH8-MPHOSPH8 MPHOSPH8 chr13 20246656 MPHOSPH8 chr13 20246763 Exonic hg19 NA BU736580 Out-of-frame Intra-chr q12.11 q12.11 120212 ChimerSeq ChiTaRs ChiTaRs SFSWAP-SFSWAP SFSWAP chr12 132250707 SFSWAP chr12 132250719 Exonic hg19 NA BF874620 Out-of-frame Intra-chr q24.33 q24.33 120213 ChimerSeq ChiTaRs ChiTaRs GTF3C1-MKI67 GTF3C1 chr16 27503707 MKI67 chr10 129903454 Exonic hg19 NA BE840900 Out-of-frame Inter-chr p12.1 q26.2 120214 ChimerSeq ChiTaRs ChiTaRs MFSD11-NR2C2 MFSD11 chr17 74738105 NR2C2 chr3 15045391 Exonic hg19 NA U10990 Out-of-frame Inter-chr q25.1 p25.1 Tumor suppressor gene Transcription factor 120215 ChimerSeq ChiTaRs ChiTaRs SLC14A2-ANXA6 SLC14A2 chr18 43163245 ANXA6 chr5 150480666 Exonic hg19 NA CF552880 Out-of-frame Inter-chr q12.3 q33.1 120216 ChimerSeq ChiTaRs ChiTaRs GPRC5C-GPRC5C GPRC5C chr17 72443265 GPRC5C chr17 72443278 Exonic hg19 NA D82510 Out-of-frame Intra-chr q25.1 q25.1 120217 ChimerSeq ChiTaRs ChiTaRs GALNT1-GALNT1 GALNT1 chr18 33289739 GALNT1 chr18 33283545 Exonic hg19 NA W52720 Out-of-frame Intra-chr q12.2 q12.2 120218 ChimerSeq ChiTaRs ChiTaRs CHST6-COTL1 CHST6 chr16 75529282 COTL1 chr16 84599202 Exonic hg19 NA AF219990 Out-of-frame Intra-chr q23.1 q24.1 120219 ChimerSeq ChiTaRs ChiTaRs LOC100505817-PPP1R8 LOC100505817 chr18 71017113 PPP1R8 chr1 28176765 Exonic hg19 NA AI638210 Out-of-frame Inter-chr p35.3 120220 ChimerSeq ChiTaRs ChiTaRs LRRC23-LSM10 LRRC23 chr12 7019317 LSM10 chr1 36859087 Exonic hg19 NA BF925700 Out-of-frame Inter-chr p13.31 p34.3 120221 ChimerSeq ChiTaRs ChiTaRs SERHL-RANBP9 SERHL chr22 42904765 RANBP9 chr6 13644838 Exonic hg19 NA BF062580 Out-of-frame Inter-chr q13.2 p23 Tumor suppressor gene 120222 ChimerSeq ChiTaRs ChiTaRs RPL18-DNM2 RPL18 chr19 49119404 DNM2 chr19 10943795 Exonic hg19 NA AW276460 Out-of-frame Intra-chr q13.33 p13.2 120223 ChimerSeq ChiTaRs ChiTaRs RPL38-HSP90AA1 RPL38 chr17 72205450 HSP90AA1 chr14 102552631 Exonic hg19 NA DA794650 Out-of-frame Inter-chr q25.1 q32.31 Oncogene 120224 ChimerSeq ChiTaRs ChiTaRs ETS2-ETS2 ETS2 chr21 40190442 ETS2 chr21 40186305 Exonic hg19 NA CK816160 Out-of-frame Intra-chr q22.2 Tumor suppressor gene Transcription factor q22.2 Tumor suppressor gene Transcription factor 120225 ChimerSeq ChiTaRs ChiTaRs GDPD5-GDPD5 GDPD5 chr11 75154286 GDPD5 chr11 75152226 Exonic hg19 NA BF994880 Out-of-frame Intra-chr q13.5 q13.5 120226 ChimerSeq ChiTaRs ChiTaRs DCUN1D2-FAM45A DCUN1D2 chr13 114134514 FAM45A chr10 120867396 Exonic hg19 NA BF736750 Out-of-frame Inter-chr q34 q26.11 120227 ChimerSeq ChiTaRs ChiTaRs RGS6-RGS6 RGS6 chr14 72472959 RGS6 chr14 72472970 Exonic hg19 NA AF119880 Out-of-frame Intra-chr q24.2 q24.2 120228 ChimerSeq ChiTaRs ChiTaRs SIAH1-CREBBP SIAH1 chr16 48454810 CREBBP chr16 3797210 Exonic hg19 NA BG992160 Out-of-frame Intra-chr q12.1 Tumor suppressor gene p13.3 Oncogene Tumor suppressor gene 120229 ChimerSeq ChiTaRs ChiTaRs GAPDH-MRPS17 GAPDH chr12 6645719 MRPS17 chr7 56022696 Exonic hg19 NA BF816390 Out-of-frame Inter-chr p13.31 p11.2 120230 ChimerSeq ChiTaRs ChiTaRs PTPRA-PDIA4 PTPRA chr20 2945518 PDIA4 chr7 148700981 Exonic hg19 NA BF800130 Out-of-frame Inter-chr p13 q36.1 120231 ChimerSeq ChiTaRs ChiTaRs SEPW1-RBM14 SEPW1 chr19 48282304 RBM14 chr11 66395548 Exonic hg19 NA DA057090 Out-of-frame Inter-chr q13.2 Tumor suppressor gene 120232 ChimerSeq ChiTaRs ChiTaRs FBRS-FBRS FBRS chr16 30678076 FBRS chr16 30678280 Exonic hg19 NA AW993120 Out-of-frame Intra-chr p11.2 p11.2 120233 ChimerSeq ChiTaRs ChiTaRs ZC3H13-ZC3H13 ZC3H13 chr13 46543985 ZC3H13 chr13 46542016 Exonic hg19 NA CA411690 Out-of-frame Intra-chr q14.13 q14.13 120234 ChimerSeq ChiTaRs ChiTaRs NEAT1-PPP6R2 NEAT1 chr11 65191693 PPP6R2 chr22 50862004 Exonic hg19 NA BE929980 Out-of-frame Inter-chr q13.1 q13.33 120235 ChimerSeq ChiTaRs ChiTaRs LENG8-PNPO LENG8 chr19 54969862 PNPO chr17 46026251 Exonic hg19 NA BQ346020 Out-of-frame Inter-chr q21.32 120236 ChimerSeq ChiTaRs ChiTaRs SNX22-SNX22 SNX22 chr15 64452321 SNX22 chr15 64448020 Exonic hg19 NA CV407110 Out-of-frame Intra-chr q22.31 q22.31 120237 ChimerSeq ChiTaRs ChiTaRs RNASEK-C17orf49-CAPZB RNASEK-C17orf49 chr17 6920267 CAPZB chr1 19683915 Exonic hg19 NA DA571250 Out-of-frame Inter-chr p13.1 p36.13 120238 ChimerSeq ChiTaRs ChiTaRs PRMT5-PRMT5 PRMT5 chr14 23391687 PRMT5 chr14 23394138 Exonic hg19 NA BE063150 Out-of-frame Intra-chr q11.2 q11.2 120239 ChimerSeq ChiTaRs ChiTaRs SNX29-MCM7 SNX29 chr16 12428742 MCM7 chr7 99690404 Exonic hg19 NA D28480 Out-of-frame Inter-chr p13.13 q22.1 120240 ChimerSeq ChiTaRs ChiTaRs PLK1-ERN2 PLK1 chr16 23701825 ERN2 chr16 23705165 Exonic hg19 NA AW362670 Out-of-frame Intra-chr p12.2 Other:PLK Tumor suppressor gene p12.2 120241 ChimerSeq ChiTaRs ChiTaRs CEP95-TBL1X CEP95 chr17 62533965 TBL1X chrX 9509441 Exonic hg19 NA BE827740 Out-of-frame Inter-chr q23.3 p22.31 120242 ChimerSeq ChiTaRs ChiTaRs DNM2-MALAT1 DNM2 chr19 10874703 MALAT1 chr11 65266514 Exonic hg19 NA BF854780 Out-of-frame Inter-chr p13.2 q13.1 120243 ChimerSeq ChiTaRs ChiTaRs SRSF6-SRSF6 SRSF6 chr20 42091411 SRSF6 chr20 42090916 Exonic hg19 NA AI936000 Out-of-frame Intra-chr q13.11 q13.11 120244 ChimerSeq ChiTaRs ChiTaRs FXYD2-UBR3 FXYD2 chr11 117695434 UBR3 chr2 170894695 Exonic hg19 NA X86400 Out-of-frame Inter-chr q23.3 q31.1 120245 ChimerSeq ChiTaRs ChiTaRs CTSZ-AOAH CTSZ chr20 57572772 AOAH chr7 36649511 Exonic hg19 NA BI025220 Out-of-frame Inter-chr q13.32 p14.2 120246 ChimerSeq ChiTaRs ChiTaRs ATG2A-SRRM2 ATG2A chr11 64676577 SRRM2 chr16 2816407 Exonic hg19 NA BI036200 Out-of-frame Inter-chr q13.1 p13.3 120247 ChimerSeq ChiTaRs ChiTaRs SERPINA3-SERPINA3 SERPINA3 chr14 95090191 SERPINA3 chr14 95090209 Exonic hg19 NA BE813450 Out-of-frame Intra-chr q32.13 q32.13 120248 ChimerSeq ChiTaRs ChiTaRs ZHX3-SPTBN1 ZHX3 chr20 39945479 SPTBN1 chr2 54889301 Exonic hg19 NA BQ717700 Out-of-frame Inter-chr q12 Transcription factor p16.2 Tumor suppressor gene 120249 ChimerSeq ChiTaRs ChiTaRs NMRAL1-RASSF4 NMRAL1 chr16 4516284 RASSF4 chr10 45472098 Exonic hg19 NA CA417360 Out-of-frame Inter-chr p13.3 q11.21 Tumor suppressor gene 120250 ChimerSeq ChiTaRs ChiTaRs SLC1A5-SLC1A5 SLC1A5 chr19 47282095 SLC1A5 chr19 47280611 Exonic hg19 NA W40520 Out-of-frame Intra-chr q13.32 q13.32 120251 ChimerSeq ChiTaRs ChiTaRs FAM96A-FAM96A FAM96A chr15 64370564 FAM96A chr15 64366108 Exonic hg19 NA AA827860 Out-of-frame Intra-chr q22.31 q22.31 120252 ChimerSeq ChiTaRs ChiTaRs ADPGK-ADPGK ADPGK chr15 73048703 ADPGK chr15 73052798 Exonic hg19 NA BQ669550 Out-of-frame Intra-chr q24.1 q24.1 120253 ChimerSeq ChiTaRs ChiTaRs KLK10-ZSCAN29 KLK10 chr19 51518756 ZSCAN29 chr15 43651374 Exonic hg19 NA AW999510 Out-of-frame Inter-chr q13.41 Tumor suppressor gene q15.3 Transcription factor 120254 ChimerSeq ChiTaRs ChiTaRs MYH9-NCL MYH9 chr22 36691704 NCL chr2 232325190 Exonic hg19 NA BF815870 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene q37.1 120255 ChimerSeq ChiTaRs ChiTaRs C11orf54-C11orf54 C11orf54 chr11 93496247 C11orf54 chr11 93495830 Exonic hg19 NA CA311300 3'UTR-CDS Intra-chr q21 q21 120256 ChimerSeq ChiTaRs ChiTaRs RBBP6-CANX RBBP6 chr16 24581461 CANX chr5 179157329 Exonic hg19 NA AL046980 Out-of-frame Inter-chr p12.1 120257 ChimerSeq ChiTaRs ChiTaRs PPM1H-ITCH PPM1H chr12 63060618 ITCH chr20 33029638 Exonic hg19 NA AW812340 Out-of-frame Inter-chr q14.2 q11.22 120258 ChimerSeq ChiTaRs ChiTaRs SETD3-SETD3 SETD3 chr14 99864914 SETD3 chr14 99924675 Exonic hg19 NA AA094080 Out-of-frame Intra-chr q32.2 q32.2 120259 ChimerSeq ChiTaRs ChiTaRs OAF-AUTS2 OAF chr11 120100650 AUTS2 chr7 70002535 Exonic hg19 NA R99080 3'UTR-3'UTR Inter-chr q23.3 q11.22 120260 ChimerSeq ChiTaRs ChiTaRs ERC1-PRKDC ERC1 chr12 1399099 PRKDC chr8 48722106 Exonic hg19 NA BE931170 Out-of-frame Inter-chr q11.21 Oncogene 120261 ChimerSeq ChiTaRs ChiTaRs NFIX-NFIX NFIX chr19 13136461 NFIX chr19 13136500 Exonic hg19 NA AA323470 Out-of-frame Intra-chr p13.13 Transcription factor p13.13 Transcription factor 120262 ChimerSeq ChiTaRs ChiTaRs MED13L-SERPINI2 MED13L chr12 116558273 SERPINI2 chr3 167173569 Exonic hg19 NA CK824480 Out-of-frame Inter-chr q24.21 q26.1 Tumor suppressor gene 120263 ChimerSeq ChiTaRs ChiTaRs RARA-RARA RARA chr17 38556859 RARA chr17 38554851 Exonic hg19 NA BI260210 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q21.2 Oncogene Transcription factor 120264 ChimerSeq ChiTaRs ChiTaRs ISCU-CLASP2 ISCU chr12 108957176 CLASP2 chr3 33666045 Exonic hg19 NA DA571580 Out-of-frame Inter-chr q23.3 p22.3 120265 ChimerSeq ChiTaRs ChiTaRs HSH2D-HSH2D HSH2D chr19 16266922 HSH2D chr19 16268950 Exonic hg19 NA AA805250 Out-of-frame Intra-chr p13.11 p13.11 120266 ChimerSeq ChiTaRs ChiTaRs JPH4-JPH4 JPH4 chr14 24043134 JPH4 chr14 24044834 Exonic hg19 NA BY798950 Out-of-frame Intra-chr q11.2 q11.2 120267 ChimerSeq ChiTaRs ChiTaRs SLC25A11-KLHL3 SLC25A11 chr17 4840655 KLHL3 chr5 136953559 Exonic hg19 NA AI480110 Out-of-frame Inter-chr p13.2 q31.2 120268 ChimerSeq ChiTaRs ChiTaRs ZNF160-UBAP2 ZNF160 chr19 53593764 UBAP2 chr9 33989005 Exonic hg19 NA AW175600 Out-of-frame Inter-chr q13.42 Transcription factor p13.3 120269 ChimerSeq ChiTaRs ChiTaRs SLC16A3-FTH1 SLC16A3 chr17 80189766 FTH1 chr11 61732038 Exonic hg19 NA AK127090 Out-of-frame Inter-chr q25.3 q12.3 120270 ChimerSeq ChiTaRs ChiTaRs MALAT1-XPNPEP1 MALAT1 chr11 65268130 XPNPEP1 chr10 111663286 Exonic hg19 NA BF902190 Out-of-frame Inter-chr q13.1 q25.1 120271 ChimerSeq ChiTaRs ChiTaRs ARFGAP3-ARFGAP3 ARFGAP3 chr22 43213234 ARFGAP3 chr22 43218359 Exonic hg19 NA AU185860 Out-of-frame Intra-chr q13.2 q13.2 120272 ChimerSeq ChiTaRs ChiTaRs THBS1-ZNF587 THBS1 chr15 39885419 ZNF587 chr19 58357351 Exonic hg19 NA BG250640 Out-of-frame Inter-chr q14 Oncogene Tumor suppressor gene q13.43 Transcription factor 120273 ChimerSeq ChiTaRs ChiTaRs KAT8-SON KAT8 chr16 31142199 SON chr21 34923215 Exonic hg19 NA AW962600 Out-of-frame Inter-chr p11.2 q22.11 Transcription factor 120274 ChimerSeq ChiTaRs ChiTaRs TTC28-CHCHD3 TTC28 chr22 28692782 CHCHD3 chr7 132719276 Exonic hg19 NA AF119850 Out-of-frame Inter-chr q12.1 q33 Transcription factor 120275 ChimerSeq ChiTaRs ChiTaRs FECH-FECH FECH chr18 55233810 FECH chr18 55218563 Exonic hg19 NA AW607390 Out-of-frame Intra-chr q21.31 q21.31 120276 ChimerSeq ChiTaRs ChiTaRs CEP95-XRCC5 CEP95 chr17 62515529 XRCC5 chr2 217069071 Exonic hg19 NA CN401380 Out-of-frame Inter-chr q23.3 q35 Tumor suppressor gene 120277 ChimerSeq ChiTaRs ChiTaRs MYO1D-MSRA MYO1D chr17 31184346 MSRA chr8 10151247 Exonic hg19 NA AW974960 Out-of-frame Inter-chr q11.2 p23.1 120278 ChimerSeq ChiTaRs ChiTaRs SBNO2-MGC16121 SBNO2 chr19 1114390 MGC16121 chrX 133678459 Exonic hg19 NA BG011650 Out-of-frame Inter-chr p13.3 120279 ChimerSeq ChiTaRs ChiTaRs COL1A1-COL1A1 COL1A1 chr17 48261663 COL1A1 chr17 48262640 Exonic hg19 NA BM674510 Out-of-frame Intra-chr q21.33 Oncogene q21.33 Oncogene 120280 ChimerSeq ChiTaRs ChiTaRs ANKRD27-ANKRD27 ANKRD27 chr19 33095333 ANKRD27 chr19 33093005 Exonic hg19 NA BE079590 Out-of-frame Intra-chr q13.11 q13.11 120281 ChimerSeq ChiTaRs ChiTaRs NUDT21-NUDT21 NUDT21 chr16 56465305 NUDT21 chr16 56468288 Exonic hg19 NA DB481810 Out-of-frame Intra-chr q13 q13 120282 ChimerSeq ChiTaRs ChiTaRs ZNF274-ZNF274 ZNF274 chr19 58722847 ZNF274 chr19 58698325 Exonic hg19 NA BF379670 Out-of-frame Intra-chr q13.43 Transcription factor q13.43 Transcription factor 120283 ChimerSeq ChiTaRs ChiTaRs SUV420H1-PNP SUV420H1 chr11 67944838 PNP chr14 20943299 Exonic hg19 NA AF116670 Out-of-frame Inter-chr q11.2 Oncogene 120284 ChimerSeq ChiTaRs ChiTaRs LOC100505817-PPP1R8 LOC100505817 chr18 71017112 PPP1R8 chr1 28176765 Exonic hg19 NA AA931130 Out-of-frame Inter-chr p35.3 120285 ChimerSeq ChiTaRs ChiTaRs RPTOR-RPTOR RPTOR chr17 78662712 RPTOR chr17 78661344 Exonic hg19 NA AW859900 Out-of-frame Intra-chr q25.3 q25.3 120286 ChimerSeq ChiTaRs ChiTaRs ZC3H7B-ZC3H7B ZC3H7B chr22 41744149 ZC3H7B chr22 41738577 Exonic hg19 NA CB409170 Out-of-frame Intra-chr q13.2 q13.2 120287 ChimerSeq ChiTaRs ChiTaRs USP31-ARPC2 USP31 chr16 23090076 ARPC2 chr2 219118097 Exonic hg19 NA AW885590 Out-of-frame Inter-chr p12.2 q35 120288 ChimerSeq ChiTaRs ChiTaRs TUBGCP3-GNAS TUBGCP3 chr13 113200178 GNAS chr20 57485050 Exonic hg19 NA BF934290 Out-of-frame Inter-chr q13.32 Oncogene 120289 ChimerSeq ChiTaRs ChiTaRs CAPNS1-CAPNS1 CAPNS1 chr19 36636932 CAPNS1 chr19 36641152 Exonic hg19 NA AW366590 Out-of-frame Intra-chr q13.12 q13.12 120290 ChimerSeq ChiTaRs ChiTaRs ECH1-FTCD ECH1 chr19 39306170 FTCD chr21 47569203 Exonic hg19 NA AI040520 Out-of-frame Inter-chr 120291 ChimerSeq ChiTaRs ChiTaRs SF3B2-SF3B2 SF3B2 chr11 65835718 SF3B2 chr11 65827020 Exonic hg19 NA BF817030 Out-of-frame Intra-chr q13.1 q13.1 120292 ChimerSeq ChiTaRs ChiTaRs NAGS-LIN54 NAGS chr17 42086426 LIN54 chr4 83868820 Exonic hg19 NA R97030 Out-of-frame Inter-chr q21.31 q21.22 Transcription factor 120293 ChimerSeq ChiTaRs ChiTaRs TSHZ2-ZRANB3 TSHZ2 chr20 52024736 ZRANB3 chr2 136070146 Exonic hg19 NA BG994430 Out-of-frame Inter-chr q13.2 Transcription factor q21.3 120294 ChimerSeq ChiTaRs ChiTaRs NRL-NRL NRL chr14 24571860 NRL chr14 24572244 Exonic hg19 NA AA493380 Out-of-frame Intra-chr q12 Transcription factor q12 Transcription factor 120295 ChimerSeq ChiTaRs ChiTaRs DNAJC5-MED1 DNAJC5 chr20 62566133 MED1 chr17 37563597 Exonic hg19 NA BE818200 Out-of-frame Inter-chr q13.33 q12 Tumor suppressor gene 120296 ChimerSeq ChiTaRs ChiTaRs SETBP1-C11orf75 SETBP1 chr18 42307685 C11orf75 chr11 93214062 Exonic hg19 NA AW866770 Out-of-frame Inter-chr q12.3 Oncogene Transcription factor 120297 ChimerSeq ChiTaRs ChiTaRs UFD1L-DOCK9 UFD1L chr22 19448122 DOCK9 chr13 99597476 Exonic hg19 NA M62000 Out-of-frame Inter-chr q32.3 120298 ChimerSeq ChiTaRs ChiTaRs ANKRD12-ANKRD12 ANKRD12 chr18 9208769 ANKRD12 chr18 9208765 Exonic hg19 NA BF747860 Out-of-frame Intra-chr p11.22 p11.22 120299 ChimerSeq ChiTaRs ChiTaRs TAGLN-NIN TAGLN chr11 117075503 NIN chr14 51237151 Exonic hg19 NA W49800 Out-of-frame Inter-chr q23.3 Tumor suppressor gene q22.1 Oncogene 120300 ChimerSeq ChiTaRs ChiTaRs ATCAY-ATCAY ATCAY chr19 3927319 ATCAY chr19 3927402 Exonic hg19 NA BF528840 Out-of-frame Intra-chr p13.3 p13.3 120301 ChimerSeq ChiTaRs ChiTaRs BOLA2-BOLA2 BOLA2 chr16 29882888 BOLA2 chr16 29910499 Exonic hg19 NA AI681390 Out-of-frame Intra-chr p11.2 p11.2 120302 ChimerSeq ChiTaRs ChiTaRs RPTOR-RPTOR RPTOR chr17 78938794 RPTOR chr17 78938838 Exonic hg19 NA AW500290 Out-of-frame Intra-chr q25.3 q25.3 120303 ChimerSeq ChiTaRs ChiTaRs SLC25A39-MRPL55 SLC25A39 chr17 42397139 MRPL55 chr1 228295950 Exonic hg19 NA AI086220 Out-of-frame Inter-chr q21.31 q42.13 120304 ChimerSeq ChiTaRs ChiTaRs MPHOSPH8-MPHOSPH8 MPHOSPH8 chr13 20246954 MPHOSPH8 chr13 20246503 Exonic hg19 NA BM717590 Out-of-frame Intra-chr q12.11 q12.11 120305 ChimerSeq ChiTaRs ChiTaRs PPP2R1A-PPP2R1A PPP2R1A chr19 52719077 PPP2R1A chr19 52719071 Exonic hg19 NA AW473090 Out-of-frame Intra-chr q13.41 Oncogene q13.41 Oncogene 120306 ChimerSeq ChiTaRs ChiTaRs LRP1-LRP1 LRP1 chr12 57569726 LRP1 chr12 57561226 Exonic hg19 NA BF849780 Out-of-frame Intra-chr q13.3 q13.3 120307 ChimerSeq ChiTaRs ChiTaRs MALAT1-CNOT8 MALAT1 chr11 65268112 CNOT8 chr5 154242795 Exonic hg19 NA BE720800 Out-of-frame Inter-chr q13.1 q33.2 120308 ChimerSeq ChiTaRs ChiTaRs GYS1-CPXM1 GYS1 chr19 49471492 CPXM1 chr20 2776380 Exonic hg19 NA AI096400 Out-of-frame Inter-chr q13.33 p13 120309 ChimerSeq ChiTaRs ChiTaRs ULK1-ULK1 ULK1 chr12 132406283 ULK1 chr12 132404577 Exonic hg19 NA BF886750 Out-of-frame Intra-chr q24.33 Other:ULK q24.33 Other:ULK 120310 ChimerSeq ChiTaRs ChiTaRs CCDC60-BMPR2 CCDC60 chr12 119918424 BMPR2 chr2 203242157 Exonic hg19 NA U25110 Out-of-frame Inter-chr q24.23 q33.1 TKL:STKR Tumor suppressor gene 120311 ChimerSeq ChiTaRs ChiTaRs LARP4-LARP4 LARP4 chr12 50855857 LARP4 chr12 50853078 Exonic hg19 NA CV342770 Out-of-frame Intra-chr q13.12 q13.12 120312 ChimerSeq ChiTaRs ChiTaRs PNN-PNN PNN chr14 39651128 PNN chr14 39649929 Exonic hg19 NA AW380890 Out-of-frame Intra-chr q21.1 Tumor suppressor gene q21.1 Tumor suppressor gene 120313 ChimerSeq ChiTaRs ChiTaRs PPM1H-PPM1H PPM1H chr12 63053896 PPM1H chr12 63056045 Exonic hg19 NA DN914850 Out-of-frame Intra-chr q14.2 q14.2 120314 ChimerSeq ChiTaRs ChiTaRs EED-AOAH EED chr11 85979547 AOAH chr7 36572828 Exonic hg19 NA DA945120 Out-of-frame Inter-chr q14.2 Tumor suppressor gene p14.2 120315 ChimerSeq ChiTaRs ChiTaRs SRCAP-SRCAP SRCAP chr16 30735916 SRCAP chr16 30735997 Exonic hg19 NA AI436740 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Transcription factor 120316 ChimerSeq ChiTaRs ChiTaRs HYOU1-HYOU1 HYOU1 chr11 118924905 HYOU1 chr11 118923026 Exonic hg19 NA BG986700 Out-of-frame Intra-chr 120317 ChimerSeq ChiTaRs ChiTaRs RANGAP1-RANGAP1 RANGAP1 chr22 41655356 RANGAP1 chr22 41656203 Exonic hg19 NA BX097070 Out-of-frame Intra-chr q13.2 q13.2 120318 ChimerSeq ChiTaRs ChiTaRs CARM1-MIR548N CARM1 chr19 11033166 MIR548N chr2 179452877 Exonic hg19 NA F00180 Out-of-frame Inter-chr p13.2 p14.2 120319 ChimerSeq ChiTaRs ChiTaRs LARGE-SSFA2 LARGE chr22 34045455 SSFA2 chr2 182794423 Exonic hg19 NA AW936520 Out-of-frame Inter-chr q31.3 120320 ChimerSeq ChiTaRs ChiTaRs TDRD3-TDRD3 TDRD3 chr13 61034663 TDRD3 chr13 61041383 Exonic hg19 NA BQ304940 Out-of-frame Intra-chr q21.2 q21.2 120321 ChimerSeq ChiTaRs ChiTaRs UBE2I-PRSS23 UBE2I chr16 1377019 PRSS23 chr11 86630697 Exonic hg19 NA BQ005300 3'UTR-3'UTR Inter-chr p13.3 q14.2 120322 ChimerSeq ChiTaRs ChiTaRs HDGFRP2-MLF2 HDGFRP2 chr19 4499655 MLF2 chr12 6875712 Exonic hg19 NA BM915020 Out-of-frame Inter-chr p13.31 120323 ChimerSeq ChiTaRs ChiTaRs MALAT1-CCNI MALAT1 chr11 65269804 CCNI chr4 77969164 Exonic hg19 NA BF577160 Out-of-frame Inter-chr q13.1 q21.1 120324 ChimerSeq ChiTaRs ChiTaRs JUP-PPP1R11 JUP chr17 39847082 PPP1R11 chr6 1367667 Exonic hg19 NA BF370190 Out-of-frame Inter-chr q21.2 Tumor suppressor gene 120325 ChimerSeq ChiTaRs ChiTaRs PTMS-DDX24 PTMS chr12 6880118 DDX24 chr14 94528872 Exonic hg19 NA CA429870 3'UTR-CDS Inter-chr p13.31 120326 ChimerSeq ChiTaRs ChiTaRs GSPT1-HPGD GSPT1 chr16 11991740 HPGD chr4 175429889 Exonic hg19 NA BF736330 Out-of-frame Inter-chr p13.13 q34.1 Tumor suppressor gene 120327 ChimerSeq ChiTaRs ChiTaRs DLG4-DLG4 DLG4 chr17 7120514 DLG4 chr17 7120789 Exonic hg19 NA CN417710 Out-of-frame Intra-chr p13.1 Tumor suppressor gene p13.1 Tumor suppressor gene 120328 ChimerSeq ChiTaRs ChiTaRs MAP3K3-STRN3 MAP3K3 chr17 61749333 STRN3 chr14 31487938 Exonic hg19 NA AV719690 Out-of-frame Inter-chr q23.3 STE:STE11 q12 120329 ChimerSeq ChiTaRs ChiTaRs MRC2-SECISBP2 MRC2 chr17 60770928 SECISBP2 chr9 91940101 Exonic hg19 NA AA837640 Out-of-frame Inter-chr q23.2 q22.2 120330 ChimerSeq ChiTaRs ChiTaRs U2AF1-PTBP2 U2AF1 chr21 44513296 PTBP2 chr1 97246202 Exonic hg19 NA DB319520 Out-of-frame Inter-chr q22.3 Oncogene p21.3 120331 ChimerSeq ChiTaRs ChiTaRs MED26-MED26 MED26 chr19 16640538 MED26 chr19 16646281 Exonic hg19 NA AL516980 Out-of-frame Intra-chr p13.11 p13.11 120332 ChimerSeq ChiTaRs ChiTaRs STRN3-MAP3K3 STRN3 chr14 31488043 MAP3K3 chr17 61748907 Exonic hg19 NA AV655690 Out-of-frame Inter-chr q12 q23.3 STE:STE11 120333 ChimerSeq ChiTaRs ChiTaRs EPS15L1-RFC1 EPS15L1 chr19 16479383 RFC1 chr4 39306343 Exonic hg19 NA BF923990 Out-of-frame Inter-chr p13.11 p14 120334 ChimerSeq ChiTaRs ChiTaRs YLPM1-RPL6 YLPM1 chr14 75248629 RPL6 chr12 112842995 Exonic hg19 NA AK095760 Out-of-frame Inter-chr q24.3 q24.13 120335 ChimerSeq ChiTaRs ChiTaRs MRE11A-ZNF385A MRE11A chr11 94151783 ZNF385A chr12 54762925 Exonic hg19 NA AW291910 Out-of-frame Inter-chr Oncogene q13.13 Transcription factor 120336 ChimerSeq ChiTaRs ChiTaRs KCNK10-WNK2 KCNK10 chr14 88781775 WNK2 chr9 95964061 Exonic hg19 NA BE062230 Out-of-frame Inter-chr q31.3 q22.31 Tumor suppressor gene 120337 ChimerSeq ChiTaRs ChiTaRs APH1B-APH1B APH1B chr15 63574609 APH1B chr15 63571675 Exonic hg19 NA DB166550 Out-of-frame Intra-chr q22.2 q22.2 120338 ChimerSeq ChiTaRs ChiTaRs RAB31-RAB31 RAB31 chr18 9862546 RAB31 chr18 9862134 Exonic hg19 NA CB241670 Out-of-frame Intra-chr p11.22 p11.22 120339 ChimerSeq ChiTaRs ChiTaRs ACTG1-SLC25A44 ACTG1 chr17 79477706 SLC25A44 chr1 156163920 Exonic hg19 NA BM552360 Out-of-frame Inter-chr q25.3 q22 120340 ChimerSeq ChiTaRs ChiTaRs UFM1-ASB8 UFM1 chr13 38937137 ASB8 chr12 48541574 Exonic hg19 NA C16520 Out-of-frame Inter-chr q13.3 q13.11 120341 ChimerSeq ChiTaRs ChiTaRs HSP90AA1-HSP90AA1 HSP90AA1 chr14 102549507 HSP90AA1 chr14 102548020 Exonic hg19 NA CA419620 Out-of-frame Intra-chr q32.31 Oncogene q32.31 Oncogene 120342 ChimerSeq ChiTaRs ChiTaRs B4GALNT3-NFATC1 B4GALNT3 chr12 648101 NFATC1 chr18 77215311 Exonic hg19 NA BF759460 Out-of-frame Inter-chr p13.33 q23 Transcription factor 120343 ChimerSeq ChiTaRs ChiTaRs TMBIM6-GPM6A TMBIM6 chr12 50135841 GPM6A chr4 176622725 Exonic hg19 NA DA189160 5'UTR-CDS Inter-chr q13.12 q34.2 120344 ChimerSeq ChiTaRs ChiTaRs KRT6A-TUFT1 KRT6A chr12 52881556 TUFT1 chr1 151538704 Exonic hg19 NA AW366720 In-Frame Inter-chr q13.13 q21.3 120345 ChimerSeq ChiTaRs ChiTaRs CCDC117-ITGB1 CCDC117 chr22 29175990 ITGB1 chr10 33226151 Exonic hg19 NA BE161800 Out-of-frame Inter-chr q12.1 p11.22 Tumor suppressor gene 120346 ChimerSeq ChiTaRs ChiTaRs SNRNP70-SNRNP70 SNRNP70 chr19 49604719 SNRNP70 chr19 49611064 Exonic hg19 NA BG958620 Out-of-frame Intra-chr q13.33 q13.33 120347 ChimerSeq ChiTaRs ChiTaRs SON-CD44 SON chr21 34929965 CD44 chr11 35250784 Exonic hg19 NA BE695450 Out-of-frame Inter-chr q22.11 Transcription factor p13 Oncogene Tumor suppressor gene 120348 ChimerSeq ChiTaRs ChiTaRs FBXL19-FBXL19 FBXL19 chr16 30960396 FBXL19 chr16 30958413 Exonic hg19 NA AV730110 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Transcription factor 120349 ChimerSeq ChiTaRs ChiTaRs TCF4-ZC3H6 TCF4 chr18 52893027 ZC3H6 chr2 113096787 Exonic hg19 NA BE161960 Out-of-frame Inter-chr q21.2 Tumor suppressor gene Transcription factor q14.1 120350 ChimerSeq ChiTaRs ChiTaRs RBM11-RBM11 RBM11 chr21 15600323 RBM11 chr21 15600315 Exonic hg19 NA AA484740 Out-of-frame Intra-chr q11.2 q11.2 120351 ChimerSeq ChiTaRs ChiTaRs JAM3-EPS8L2 JAM3 chr11 134019966 EPS8L2 chr11 726684 Exonic hg19 NA T35070 Out-of-frame Intra-chr q25 p15.5 120352 ChimerSeq ChiTaRs ChiTaRs STX4-KRT7 STX4 chr16 31051483 KRT7 chr12 52633336 Exonic hg19 NA CB121190 Out-of-frame Inter-chr p11.2 q13.13 120353 ChimerSeq ChiTaRs ChiTaRs ATP5E-DNAJB6 ATP5E chr20 57607453 DNAJB6 chr7 157209259 Exonic hg19 NA AV712800 Out-of-frame Inter-chr q13.32 q36.3 120354 ChimerSeq ChiTaRs ChiTaRs CASC3-CTDSP1 CASC3 chr17 38328133 CTDSP1 chr2 219270222 Exonic hg19 NA BF750860 Out-of-frame Inter-chr q21.1 q35 120355 ChimerSeq ChiTaRs ChiTaRs MKL1-MKL1 MKL1 chr22 40982618 MKL1 chr22 40982661 Exonic hg19 NA BU674920 Out-of-frame Intra-chr q13.2 q13.2 120356 ChimerSeq ChiTaRs ChiTaRs UBE2V1-UBE2V1 UBE2V1 chr20 48709921 UBE2V1 chr20 48709900 Exonic hg19 NA AW807840 Out-of-frame Intra-chr q13.13 q13.13 120357 ChimerSeq ChiTaRs ChiTaRs C17orf76-AS1-LRRC59 C17orf76-AS1 chr17 16344612 LRRC59 chr17 48470113 Exonic hg19 NA DA370250 Out-of-frame Intra-chr q21.33 Tumor suppressor gene 120358 ChimerSeq ChiTaRs ChiTaRs RCOR1-RCOR1 RCOR1 chr14 103120824 RCOR1 chr14 103121864 Exonic hg19 NA AW801700 Out-of-frame Intra-chr q32.31 q32.31 120359 ChimerSeq ChiTaRs ChiTaRs KLF12-KLF12 KLF12 chr13 74615582 KLF12 chr13 74615294 Exonic hg19 NA BE073840 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Transcription factor 120360 ChimerSeq ChiTaRs ChiTaRs PCSK7-PCSK7 PCSK7 chr11 117076570 PCSK7 chr11 117089218 Exonic hg19 NA BP201810 Out-of-frame Intra-chr q23.3 q23.3 120361 ChimerSeq ChiTaRs ChiTaRs MYH7-GYS1 MYH7 chr14 23883041 GYS1 chr19 49472158 Exonic hg19 NA AI312670 Out-of-frame Inter-chr q11.2 q13.33 120362 ChimerSeq ChiTaRs ChiTaRs NOL3-TG NOL3 chr16 67209572 TG chr8 134128898 Exonic hg19 NA BG993810 Out-of-frame Inter-chr q22.1 q24.22 120363 ChimerSeq ChiTaRs ChiTaRs STAT6-STAT6 STAT6 chr12 57490324 STAT6 chr12 57490394 Exonic hg19 NA AW848250 Out-of-frame Intra-chr q13.3 Transcription factor q13.3 Transcription factor 120364 ChimerSeq ChiTaRs ChiTaRs MED13-MED13 MED13 chr17 60084965 MED13 chr17 60082557 Exonic hg19 NA CV351040 Out-of-frame Intra-chr q23.2 q23.2 120365 ChimerSeq ChiTaRs ChiTaRs EPS8-COL3A1 EPS8 chr12 15908649 COL3A1 chr2 189873681 Exonic hg19 NA BG959090 Out-of-frame Inter-chr p12.3 q32.2 120366 ChimerSeq ChiTaRs ChiTaRs NKD1-LOC440354 NKD1 chr16 50631992 LOC440354 chr16 29537503 Exonic hg19 NA CV315180 Out-of-frame Intra-chr q12.1 120367 ChimerSeq ChiTaRs ChiTaRs HNRNPM-CHCHD3 HNRNPM chr19 8514792 CHCHD3 chr7 132747386 Exonic hg19 NA BF336220 Out-of-frame Inter-chr p13.2 q33 Transcription factor 120368 ChimerSeq ChiTaRs ChiTaRs MLL-TMX2-CTNND1 MLL chr11 118354935 TMX2-CTNND1 chr11 57513299 Exonic hg19 NA GU353068 Out-of-frame Intra-chr q23.3 q12.1 120369 ChimerSeq ChiTaRs ChiTaRs FAM96B-FAM96B FAM96B chr16 66966699 FAM96B chr16 66967615 Exonic hg19 NA CB250450 Out-of-frame Intra-chr q22.1 q22.1 120370 ChimerSeq ChiTaRs ChiTaRs ITPK1-KLHL29 ITPK1 chr14 93536152 KLHL29 chr2 23750350 Exonic hg19 NA BI053080 Out-of-frame Inter-chr p24.1 120371 ChimerSeq ChiTaRs ChiTaRs AKAP13-AKAP13 AKAP13 chr15 86228104 AKAP13 chr15 86253808 Exonic hg19 NA AI949560 Out-of-frame Intra-chr q25.3 q25.3 120372 ChimerSeq ChiTaRs ChiTaRs NPC1-NPC1 NPC1 chr18 21137298 NPC1 chr18 21126866 Exonic hg19 NA AW855630 Out-of-frame Intra-chr q11.2 q11.2 120373 ChimerSeq ChiTaRs ChiTaRs GSTP1-FAM53B GSTP1 chr11 67354125 FAM53B chr10 126310197 Exonic hg19 NA AW263990 Out-of-frame Inter-chr q13.2 Tumor suppressor gene q26.13 120374 ChimerSeq ChiTaRs ChiTaRs DMXL2-WDR4 DMXL2 chr15 51753819 WDR4 chr21 44290868 Exonic hg19 NA CV365520 Out-of-frame Inter-chr q21.2 q22.3 120375 ChimerSeq ChiTaRs ChiTaRs SNAP25-IGSF9B SNAP25 chr20 10287819 IGSF9B chr11 133802427 Exonic hg19 NA BQ340310 Out-of-frame Inter-chr p12.2 q25 120376 ChimerSeq ChiTaRs ChiTaRs RCAN1-RCAN1 RCAN1 chr21 35895904 RCAN1 chr21 35892998 Exonic hg19 NA BF881160 Out-of-frame Intra-chr q22.12 q22.12 120377 ChimerSeq ChiTaRs ChiTaRs CIT-NUTF2 CIT chr12 120220235 NUTF2 chr16 67890992 Exonic hg19 NA AI590610 Out-of-frame Inter-chr q24.23 q22.1 120378 ChimerSeq ChiTaRs ChiTaRs DCAF5-ARF1 DCAF5 chr14 69519154 ARF1 chr1 228286629 Exonic hg19 NA W94280 Out-of-frame Inter-chr q24.1 q42.13 Tumor suppressor gene 120379 ChimerSeq ChiTaRs ChiTaRs IGFLR1-GTF3C5 IGFLR1 chr19 36234783 GTF3C5 chr9 135930104 Exonic hg19 NA AI571350 Out-of-frame Inter-chr q13.12 q34.13 120380 ChimerSeq ChiTaRs ChiTaRs OXA1L-NCKAP1 OXA1L chr14 23240989 NCKAP1 chr2 183790329 Exonic hg19 NA N36260 Out-of-frame Inter-chr q11.2 q32.1 120381 ChimerSeq ChiTaRs ChiTaRs B2M-B2M B2M chr15 45010343 B2M chr15 45007624 Exonic hg19 NA BG900520 Out-of-frame Intra-chr Oncogene Oncogene 120382 ChimerSeq ChiTaRs ChiTaRs PYGL-STON1-GTF2A1L PYGL chr14 51372197 STON1-GTF2A1L chr2 48824707 Exonic hg19 NA AA147640 Out-of-frame Inter-chr q22.1 p16.3 120383 ChimerSeq ChiTaRs ChiTaRs ATP2C2-EIF3A ATP2C2 chr16 84438833 EIF3A chr10 120817711 Exonic hg19 NA BE841770 Out-of-frame Inter-chr q24.1 q26.11 120384 ChimerSeq ChiTaRs ChiTaRs CUL4A-CUL4A CUL4A chr13 113909348 CUL4A chr13 113909351 Exonic hg19 NA BE925870 Out-of-frame Intra-chr q34 q34 120385 ChimerSeq ChiTaRs ChiTaRs ATP9B-STK10 ATP9B chr18 77037194 STK10 chr5 171510239 Exonic hg19 NA DB028190 Out-of-frame Inter-chr q35.1 Tumor suppressor gene 120386 ChimerSeq ChiTaRs ChiTaRs URI1-URI1 URI1 chr19 30504370 URI1 chr19 30504367 Exonic hg19 NA AA809230 Out-of-frame Intra-chr q12 q12 120387 ChimerSeq ChiTaRs ChiTaRs GPC5-GPC5 GPC5 chr13 93476181 GPC5 chr13 93473461 Exonic hg19 NA DW467550 Out-of-frame Intra-chr q31.3 Tumor suppressor gene q31.3 Tumor suppressor gene 120388 ChimerSeq ChiTaRs ChiTaRs ETV6-EPHA6 ETV6 chr12 12265329 EPHA6 chr3 96969710 Exonic hg19 NA AV734180 Out-of-frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q11.2 120389 ChimerSeq ChiTaRs ChiTaRs NOP56-PPAP2B NOP56 chr20 2637784 PPAP2B chr1 56961999 Exonic hg19 NA W23530 Out-of-frame Inter-chr p13 120390 ChimerSeq ChiTaRs ChiTaRs GSPT1-GSPT1 GSPT1 chr16 11984956 GSPT1 chr16 11969727 Exonic hg19 NA BQ344470 Out-of-frame Intra-chr p13.13 p13.13 120391 ChimerSeq ChiTaRs ChiTaRs CCDC91-FRY CCDC91 chr12 28702997 FRY chr13 32794482 Exonic hg19 NA AW897460 Out-of-frame Inter-chr p11.22 q13.1 120392 ChimerSeq ChiTaRs ChiTaRs NEMF-NEMF NEMF chr14 50269254 NEMF chr14 50272808 Exonic hg19 NA BQ363640 Out-of-frame Intra-chr q21.3 q21.3 120393 ChimerSeq ChiTaRs ChiTaRs CRK-WDR47 CRK chr17 1349884 WDR47 chr1 109549160 Exonic hg19 NA BE062150 Out-of-frame Inter-chr p13.3 p13.3 120394 ChimerSeq ChiTaRs ChiTaRs RNPS1-ZEB2 RNPS1 chr16 2318115 ZEB2 chr2 145154061 Exonic hg19 NA DA783540 Out-of-frame Inter-chr p13.3 q22.3 Transcription factor 120395 ChimerSeq ChiTaRs ChiTaRs TXNRD2-RHBDD1 TXNRD2 chr22 19882248 RHBDD1 chr2 227718717 Exonic hg19 NA BX089300 Out-of-frame Inter-chr q11.21 q36.3 120396 ChimerSeq ChiTaRs ChiTaRs C3-SCAMP2 C3 chr19 6677901 SCAMP2 chr15 75146171 Exonic hg19 NA AA699990 Out-of-frame Inter-chr p13.3 q24.1 120397 ChimerSeq ChiTaRs ChiTaRs PRH1-PRR4-NUP214 PRH1-PRR4 chr12 11084923 NUP214 chr9 134062501 Exonic hg19 NA BX487600 Out-of-frame Inter-chr q34.13 120398 ChimerSeq ChiTaRs ChiTaRs SIRT6-SDC3 SIRT6 chr19 4174171 SDC3 chr1 31346053 Exonic hg19 NA AI148370 Out-of-frame Inter-chr p13.3 Tumor suppressor gene p35.2 120399 ChimerSeq ChiTaRs ChiTaRs LYZ-AP4M1 LYZ chr12 69742306 AP4M1 chr7 99707361 Exonic hg19 NA CB986850 Out-of-frame Inter-chr q15 q22.1 120400 ChimerSeq ChiTaRs ChiTaRs TMEM136-TMEM136 TMEM136 chr11 120203895 TMEM136 chr11 120203573 Exonic hg19 NA CA778080 Out-of-frame Intra-chr q23.3 q23.3 120401 ChimerSeq ChiTaRs ChiTaRs C19orf6-FASN C19orf6 chr19 1012147 FASN chr17 80046844 Exonic hg19 NA BG982750 Out-of-frame Inter-chr q25.3 120402 ChimerSeq ChiTaRs ChiTaRs PCDH9-PCDH9 PCDH9 chr13 67801437 PCDH9 chr13 67800498 Exonic hg19 NA BM562980 Out-of-frame Intra-chr q21.32 Tumor suppressor gene q21.32 Tumor suppressor gene 120403 ChimerSeq ChiTaRs ChiTaRs LOC100499227-LOC100499227 LOC100499227 chr11 119290000 LOC100499227 chr11 119289427 Exonic hg19 NA BF921050 Out-of-frame Intra-chr 120404 ChimerSeq ChiTaRs ChiTaRs BOLA2-BOLA2 BOLA2 chr16 29857577 BOLA2 chr16 29855853 Exonic hg19 NA AW883460 Out-of-frame Intra-chr p11.2 p11.2 120405 ChimerSeq ChiTaRs ChiTaRs BTBD7-FARSB BTBD7 chr14 93749343 FARSB chr2 223436464 Exonic hg19 NA AA651740 Out-of-frame Inter-chr q36.1 120406 ChimerSeq ChiTaRs ChiTaRs SERPINA1-MOB2 SERPINA1 chr14 94845837 MOB2 chr11 1756031 Exonic hg19 NA BX500960 Out-of-frame Inter-chr q32.13 p15.5 120407 ChimerSeq ChiTaRs ChiTaRs ICAM2-ENO1 ICAM2 chr17 62097977 ENO1 chr1 8931949 Exonic hg19 NA BE268890 5'UTR-CDS Inter-chr q23.3 p36.23 120408 ChimerSeq ChiTaRs ChiTaRs LUC7L3-SCGB3A1 LUC7L3 chr17 48823351 SCGB3A1 chr5 180017105 Exonic hg19 NA BM968150 Out-of-frame Inter-chr q21.33 q35.3 Tumor suppressor gene 120409 ChimerSeq ChiTaRs ChiTaRs CDK12-CDK12 CDK12 chr17 37690797 CDK12 chr17 37690498 Exonic hg19 NA BU608770 Out-of-frame Intra-chr q12 Oncogene q12 Oncogene 120410 ChimerSeq ChiTaRs ChiTaRs TP53INP2-TP53INP2 TP53INP2 chr20 33301238 TP53INP2 chr20 33301070 Exonic hg19 NA BU677110 Out-of-frame Intra-chr q11.22 q11.22 120411 ChimerSeq ChiTaRs ChiTaRs RBM4-RBM14-RBM4 RBM4 chr11 66430445 RBM14-RBM4 chr11 66412741 Exonic hg19 NA BE154890 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 Tumor suppressor gene 120412 ChimerSeq ChiTaRs ChiTaRs NUDT21-NUDT21 NUDT21 chr16 56465304 NUDT21 chr16 56466613 Exonic hg19 NA DB476730 Out-of-frame Intra-chr q13 q13 120413 ChimerSeq ChiTaRs ChiTaRs TTR-TPT1 TTR chr18 29178789 TPT1 chr13 45912799 Exonic hg19 NA AI133630 Out-of-frame Inter-chr q12.1 q14.13 120414 ChimerSeq ChiTaRs ChiTaRs TAF4-TAF4 TAF4 chr20 60551132 TAF4 chr20 60551357 Exonic hg19 NA BF331400 Out-of-frame Intra-chr 120415 ChimerSeq ChiTaRs ChiTaRs MPND-HM13 MPND chr19 4359126 HM13 chr20 30150711 Exonic hg19 NA BF921400 Out-of-frame Inter-chr p13.3 q11.21 120416 ChimerSeq ChiTaRs ChiTaRs EHD2-EHD2 EHD2 chr19 48246049 EHD2 chr19 48246037 Exonic hg19 NA BF684520 Out-of-frame Intra-chr q13.33 q13.33 120417 ChimerSeq ChiTaRs ChiTaRs MALAT1-ESR1 MALAT1 chr11 65268330 ESR1 chr6 152151630 Exonic hg19 NA AI908660 Out-of-frame Inter-chr q13.1 q25.1 Oncogene Tumor suppressor gene Transcription factor 120418 ChimerSeq ChiTaRs ChiTaRs CABLES1-STARD3NL CABLES1 chr18 20784426 STARD3NL chr7 38259474 Exonic hg19 NA BQ347130 Out-of-frame Inter-chr q11.2 Tumor suppressor gene p14.1 120419 ChimerSeq ChiTaRs ChiTaRs LOC284889-TPRKB LOC284889 chr22 24237398 TPRKB chr2 73956633 Exonic hg19 NA BC018180 Out-of-frame Inter-chr p13.1 120420 ChimerSeq ChiTaRs ChiTaRs RAP1GAP2-CTTNBP2NL RAP1GAP2 chr17 2940059 CTTNBP2NL chr1 112945294 Exonic hg19 NA BE181370 Out-of-frame Inter-chr p13.3 p13.2 120421 ChimerSeq ChiTaRs ChiTaRs RTCB-RTCB RTCB chr22 32793967 RTCB chr22 32795667 Exonic hg19 NA AA299980 Out-of-frame Intra-chr q12.3 q12.3 120422 ChimerSeq ChiTaRs ChiTaRs QRICH2-QRICH2 QRICH2 chr17 74278410 QRICH2 chr17 74278435 Exonic hg19 NA BE061270 Out-of-frame Intra-chr q25.1 q25.1 120423 ChimerSeq ChiTaRs ChiTaRs ARID4A-ARID4A ARID4A chr14 58817970 ARID4A chr14 58811438 Exonic hg19 NA BQ575110 Out-of-frame Intra-chr q23.1 q23.1 120424 ChimerSeq ChiTaRs ChiTaRs LOXL1-KARS LOXL1 chr15 74237821 KARS chr16 75661630 Exonic hg19 NA BG113950 Out-of-frame Inter-chr q24.1 q23.1 120425 ChimerSeq ChiTaRs ChiTaRs WWOX-PKP4 WWOX chr16 78535089 PKP4 chr2 159537213 Exonic hg19 NA BI042280 Out-of-frame Inter-chr q23.1 Tumor suppressor gene q24.1 120426 ChimerSeq ChiTaRs ChiTaRs FLI1-EWSR1 FLI1 chr11 128652200 EWSR1 chr22 29685275 Exonic hg19 NA JX266528 Out-of-frame Inter-chr q24.3 Oncogene Transcription factor q12.2 KB Pub 120427 ChimerSeq ChiTaRs ChiTaRs KLK3-KLK3 KLK3 chr19 51363418 KLK3 chr19 51361523 Exonic hg19 NA AA226360 Out-of-frame Intra-chr q13.33 q13.33 120428 ChimerSeq ChiTaRs ChiTaRs OSBPL8-ZMYM4 OSBPL8 chr12 76796516 ZMYM4 chr1 35836113 Exonic hg19 NA BF766720 Out-of-frame Inter-chr q21.2 p34.3 120429 ChimerSeq ChiTaRs ChiTaRs IGFBP4-IGFBP4 IGFBP4 chr17 38610281 IGFBP4 chr17 38613059 Exonic hg19 NA BI046620 Out-of-frame Intra-chr q21.2 Tumor suppressor gene q21.2 Tumor suppressor gene 120430 ChimerSeq ChiTaRs ChiTaRs SRRM2-NUFIP2 SRRM2 chr16 2813794 NUFIP2 chr17 27584218 Exonic hg19 NA BE010610 Out-of-frame Inter-chr p13.3 q11.2 120431 ChimerSeq ChiTaRs ChiTaRs DIABLO-LRRC47 DIABLO chr12 122710552 LRRC47 chr1 3697555 Exonic hg19 NA CN357810 Out-of-frame Inter-chr q24.31 Tumor suppressor gene p36.32 120432 ChimerSeq ChiTaRs ChiTaRs LOC647946-LOC647946 LOC647946 chr18 37374805 LOC647946 chr18 37374689 Exonic hg19 NA CV343960 Out-of-frame Intra-chr 120433 ChimerSeq ChiTaRs ChiTaRs COASY-DTD1 COASY chr17 40717050 DTD1 chr20 18576749 Exonic hg19 NA BE252620 Out-of-frame Inter-chr q21.2 p11.23 120434 ChimerSeq ChiTaRs ChiTaRs SYT1-NUP133 SYT1 chr12 79470412 NUP133 chr1 229611451 Exonic hg19 NA AA326630 Out-of-frame Inter-chr q21.2 q42.13 120435 ChimerSeq ChiTaRs ChiTaRs TGIF2-C20orf24-TGIF2-C20orf24 TGIF2-C20orf24 chr20 35240957 TGIF2-C20orf24 chr20 35240632 Exonic hg19 NA BU679590 Out-of-frame Intra-chr q11.23 Transcription factor q11.23 120436 ChimerSeq ChiTaRs ChiTaRs CSRNP2-ATP1B1 CSRNP2 chr12 51470380 ATP1B1 chr1 169077152 Exonic hg19 NA AI902420 Out-of-frame Inter-chr q13.12 Transcription factor q24.2 120437 ChimerSeq ChiTaRs ChiTaRs ARIH1-ARIH1 ARIH1 chr15 72878802 ARIH1 chr15 72878767 Exonic hg19 NA BG282810 Out-of-frame Intra-chr q24.1 q24.1 120438 ChimerSeq ChiTaRs ChiTaRs FER1L4-ADAM12 FER1L4 chr20 34170397 ADAM12 chr10 127781262 Exonic hg19 NA BF990220 Out-of-frame Inter-chr q11.22 Tumor suppressor gene q26.2 120439 ChimerSeq ChiTaRs ChiTaRs CDCA4-PTK2B CDCA4 chr14 105482575 PTK2B chr8 27202136 Exonic hg19 NA AW859660 Out-of-frame Inter-chr q32.33 p21.2 120440 ChimerSeq ChiTaRs ChiTaRs SQRDL-NID1 SQRDL chr15 45983469 NID1 chr1 236143879 Exonic hg19 NA BU075210 Out-of-frame Inter-chr q42.3 120441 ChimerSeq ChiTaRs ChiTaRs PPP1R14A-EIF4G1 PPP1R14A chr19 38742046 EIF4G1 chr3 184046457 Exonic hg19 NA AI744700 Out-of-frame Inter-chr q13.2 q27.1 120442 ChimerSeq ChiTaRs ChiTaRs GGT7-CREBBP GGT7 chr20 33437803 CREBBP chr16 3776978 Exonic hg19 NA H19810 Out-of-frame Inter-chr q11.22 p13.3 Oncogene Tumor suppressor gene 120443 ChimerSeq ChiTaRs ChiTaRs CERS5-CERS5 CERS5 chr12 50524302 CERS5 chr12 50524270 Exonic hg19 NA BI014120 Out-of-frame Intra-chr q13.12 q13.12 120444 ChimerSeq ChiTaRs ChiTaRs DNAJC5-CLASRP DNAJC5 chr20 62541249 CLASRP chr19 45554411 Exonic hg19 NA BE067370 Out-of-frame Inter-chr q13.33 q13.32 120445 ChimerSeq ChiTaRs ChiTaRs ARF3-OGFOD2 ARF3 chr12 49332754 OGFOD2 chr12 123463043 Exonic hg19 NA R23430 Out-of-frame Intra-chr q13.12 q24.31 120446 ChimerSeq ChiTaRs ChiTaRs MLEC-MAGI1 MLEC chr12 121125966 MAGI1 chr3 65720244 Exonic hg19 NA BF806090 Out-of-frame Inter-chr q24.31 Oncogene 120447 ChimerSeq ChiTaRs ChiTaRs KRT4-KRT4 KRT4 chr12 53200681 KRT4 chr12 53200368 Exonic hg19 NA BF000870 Out-of-frame Intra-chr q13.13 q13.13 120448 ChimerSeq ChiTaRs ChiTaRs R3HDM2-R3HDM2 R3HDM2 chr12 57648708 R3HDM2 chr12 57650213 Exonic hg19 NA BF955330 Out-of-frame Intra-chr q13.3 q13.3 120449 ChimerSeq ChiTaRs ChiTaRs TOX4-RPS27A TOX4 chr14 21946465 RPS27A chr2 55460973 Exonic hg19 NA DA583490 Out-of-frame Inter-chr q11.2 p16.1 120450 ChimerSeq ChiTaRs ChiTaRs TRAPPC8-TRAPPC8 TRAPPC8 chr18 29410944 TRAPPC8 chr18 29410703 Exonic hg19 NA D82760 Out-of-frame Intra-chr q12.1 q12.1 120451 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65267454 MALAT1 chr11 65267411 Exonic hg19 NA AW977290 Out-of-frame Intra-chr q13.1 q13.1 120452 ChimerSeq ChiTaRs ChiTaRs USP22-RUSC2 USP22 chr17 20919165 RUSC2 chr9 35555682 Exonic hg19 NA BF821260 Out-of-frame Inter-chr p11.2 p13.3 120453 ChimerSeq ChiTaRs ChiTaRs INF2-TGIF2-C20orf24 INF2 chr14 105179261 TGIF2-C20orf24 chr20 35238039 Exonic hg19 NA BF846740 Out-of-frame Inter-chr q32.33 q11.23 Transcription factor 120454 ChimerSeq ChiTaRs ChiTaRs MYH14-MYH14 MYH14 chr19 50813509 MYH14 chr19 50813175 Exonic hg19 NA BI060470 Out-of-frame Intra-chr q13.33 q13.33 120455 ChimerSeq ChiTaRs ChiTaRs UNC13C-NMNAT2 UNC13C chr15 54388134 NMNAT2 chr1 183217373 Exonic hg19 NA AK126960 Out-of-frame Inter-chr q21.3 q25.3 120456 ChimerSeq ChiTaRs ChiTaRs RARA-RARA RARA chr17 38551774 RARA chr17 38545730 Exonic hg19 NA AI359500 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q21.2 Oncogene Transcription factor 120457 ChimerSeq ChiTaRs ChiTaRs SMARCA4-SMARCA4 SMARCA4 chr19 11144176 SMARCA4 chr19 11144010 Exonic hg19 NA BI040670 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Oncogene Tumor suppressor gene 120458 ChimerSeq ChiTaRs ChiTaRs CCDC92-BDKRB2 CCDC92 chr12 124421131 BDKRB2 chr14 96707752 Exonic hg19 NA BE466880 Out-of-frame Inter-chr q32.2 120459 ChimerSeq ChiTaRs ChiTaRs BCAS3-BCAS3 BCAS3 chr17 59293377 BCAS3 chr17 59299411 Exonic hg19 NA DN919080 Out-of-frame Intra-chr q23.2 q23.2 120460 ChimerSeq ChiTaRs ChiTaRs NOP2-SNRPN NOP2 chr12 6666537 SNRPN chr15 25213089 Exonic hg19 NA BF769740 Out-of-frame Inter-chr p13.31 q11.2 120461 ChimerSeq ChiTaRs ChiTaRs SNX22-PPIB SNX22 chr15 64449009 PPIB chr15 64452305 Exonic hg19 NA BQ299740 Out-of-frame Intra-chr q22.31 q22.31 120462 ChimerSeq ChiTaRs ChiTaRs SIK2-SIK2 SIK2 chr11 111596584 SIK2 chr11 111594336 Exonic hg19 NA CK001240 Out-of-frame Intra-chr q23.1 q23.1 120463 ChimerSeq ChiTaRs ChiTaRs MSL1-RBM28 MSL1 chr17 38292795 RBM28 chr7 127979769 Exonic hg19 NA BQ336160 Out-of-frame Inter-chr q21.1 q32.1 120464 ChimerSeq ChiTaRs ChiTaRs N4BP2L2-N4BP2L2 N4BP2L2 chr13 33092094 N4BP2L2 chr13 33091994 Exonic hg19 NA BG982040 Out-of-frame Intra-chr q13.1 q13.1 120465 ChimerSeq ChiTaRs ChiTaRs WIZ-WIZ WIZ chr19 15537879 WIZ chr19 15536081 Exonic hg19 NA CN297530 Out-of-frame Intra-chr p13.12 Transcription factor p13.12 Transcription factor 120466 ChimerSeq ChiTaRs ChiTaRs PDPK1-CNTNAP1 PDPK1 chr16 2644267 CNTNAP1 chr17 40842024 Exonic hg19 NA CA390240 Out-of-frame Inter-chr p13.3 q21.2 120467 ChimerSeq ChiTaRs ChiTaRs CNTN5-CNTN5 CNTN5 chr11 98991806 CNTN5 chr11 98986459 Exonic hg19 NA H46910 Out-of-frame Intra-chr q22.1 q22.1 120468 ChimerSeq ChiTaRs ChiTaRs UMODL1-PRDM16 UMODL1 chr21 43542800 PRDM16 chr1 3030970 Exonic hg19 NA EL582620 Out-of-frame Inter-chr q22.3 p36.32 Transcription factor 120469 ChimerSeq ChiTaRs ChiTaRs CCDC43-RPL23A CCDC43 chr17 42761280 RPL23A chr17 27047024 Exonic hg19 NA BQ943640 Out-of-frame Intra-chr q21.31 q11.2 120470 ChimerSeq ChiTaRs ChiTaRs OLFM4-DGUOK OLFM4 chr13 53625831 DGUOK chr2 74160102 Exonic hg19 NA AW936940 Out-of-frame Inter-chr q14.3 Tumor suppressor gene p13.1 120471 ChimerSeq ChiTaRs ChiTaRs SIK2-RAB6A SIK2 chr11 111535864 RAB6A chr11 73388284 Exonic hg19 NA AW891070 Out-of-frame Intra-chr q23.1 q13.4 120472 ChimerSeq ChiTaRs ChiTaRs PSMD8-SLC35B2 PSMD8 chr19 38874464 SLC35B2 chr6 44222415 Exonic hg19 NA AA437370 3'UTR-3'UTR Inter-chr q13.2 p21.1 120473 ChimerSeq ChiTaRs ChiTaRs CKM-CKM CKM chr19 45821136 CKM chr19 45815041 Exonic hg19 NA F01290 Out-of-frame Intra-chr q13.32 q13.32 120474 ChimerSeq ChiTaRs ChiTaRs ZBTB7A-DKK2 ZBTB7A chr19 4046660 DKK2 chr4 107945872 Exonic hg19 NA AI052500 Out-of-frame Inter-chr p13.3 Transcription factor q25 120475 ChimerSeq ChiTaRs ChiTaRs KAT5-KAT5 KAT5 chr11 65484234 KAT5 chr11 65481975 Exonic hg19 NA AA344110 Out-of-frame Intra-chr q13.1 Tumor suppressor gene q13.1 Tumor suppressor gene 120476 ChimerSeq ChiTaRs ChiTaRs KRT7-PLXNB2 KRT7 chr12 52638511 PLXNB2 chr22 50713802 Exonic hg19 NA BF087400 Out-of-frame Inter-chr q13.13 q13.33 120477 ChimerSeq ChiTaRs ChiTaRs CFDP1-CFDP1 CFDP1 chr16 75344025 CFDP1 chr16 75348185 Exonic hg19 NA AW936390 Out-of-frame Intra-chr q23.1 q23.1 120478 ChimerSeq ChiTaRs ChiTaRs ATP2C2-ATP2C2 ATP2C2 chr16 84468656 ATP2C2 chr16 84472645 Exonic hg19 NA CV361800 Out-of-frame Intra-chr q24.1 q24.1 120479 ChimerSeq ChiTaRs ChiTaRs CBFB-HNRNPA2B1 CBFB chr16 67134120 HNRNPA2B1 chr7 26236224 Exonic hg19 NA BF830480 Out-of-frame Inter-chr q22.1 p15.2 120480 ChimerSeq ChiTaRs ChiTaRs LOXL1-LOXL1 LOXL1 chr15 74244234 LOXL1 chr15 74220699 Exonic hg19 NA DA809120 Out-of-frame Intra-chr q24.1 q24.1 120481 ChimerSeq ChiTaRs ChiTaRs YWHAH-SDC3 YWHAH chr22 32353590 SDC3 chr1 31378064 Exonic hg19 NA AW166100 3'UTR-CDS Inter-chr q12.3 p35.2 120482 ChimerSeq ChiTaRs ChiTaRs CC2D1A-MED10 CC2D1A chr19 14041692 MED10 chr5 6372242 Exonic hg19 NA BU686640 Out-of-frame Inter-chr p13.12 Transcription factor p15.31 120483 ChimerSeq ChiTaRs ChiTaRs FOXO1-FOXO1 FOXO1 chr13 41130261 FOXO1 chr13 41129907 Exonic hg19 NA BI495640 Out-of-frame Intra-chr q14.11 Oncogene Tumor suppressor gene Transcription factor q14.11 Oncogene Tumor suppressor gene Transcription factor 120484 ChimerSeq ChiTaRs ChiTaRs GRN-GRN GRN chr17 42429016 GRN chr17 42426550 Exonic hg19 NA AU100550 Out-of-frame Intra-chr q21.31 q21.31 120485 ChimerSeq ChiTaRs ChiTaRs MPG-ENTPD6 MPG chr16 135401 ENTPD6 chr20 25187294 Exonic hg19 NA EL584050 Out-of-frame Inter-chr p13.3 p11.21 120486 ChimerSeq ChiTaRs ChiTaRs TXNRD1-RNF185 TXNRD1 chr12 104714927 RNF185 chr22 31556165 Exonic hg19 NA BP242040 Out-of-frame Inter-chr q23.3 q12.2 120487 ChimerSeq ChiTaRs ChiTaRs RPL28-TPI1 RPL28 chr19 55899744 TPI1 chr12 6976702 Exonic hg19 NA BC004230 Out-of-frame Inter-chr q13.42 p13.31 120488 ChimerSeq ChiTaRs ChiTaRs GNA13-GNA13 GNA13 chr17 63007465 GNA13 chr17 63007439 Exonic hg19 NA AA748130 Out-of-frame Intra-chr q24.1 q24.1 120489 ChimerSeq ChiTaRs ChiTaRs ARHGEF15-ARHGEF15 ARHGEF15 chr17 8220478 ARHGEF15 chr17 8218630 Exonic hg19 NA AL601490 Out-of-frame Intra-chr p13.1 p13.1 120490 ChimerSeq ChiTaRs ChiTaRs BLCAP-EEF1B2 BLCAP chr20 36152082 EEF1B2 chr2 207026773 Exonic hg19 NA BE783880 Out-of-frame Inter-chr q11.23 Tumor suppressor gene 120491 ChimerSeq ChiTaRs ChiTaRs PPDPF-NEAT1 PPDPF chr20 62153307 NEAT1 chr11 65193309 Exonic hg19 NA BF087800 Out-of-frame Inter-chr q13.33 q13.1 120492 ChimerSeq ChiTaRs ChiTaRs N4BP1-NFE2L2 N4BP1 chr16 48595865 NFE2L2 chr2 178096000 Exonic hg19 NA BI037770 Out-of-frame Inter-chr q12.1 q31.2 Oncogene Transcription factor 120493 ChimerSeq ChiTaRs ChiTaRs NUCB1-SCN8A NUCB1 chr19 49425893 SCN8A chr12 52200983 Exonic hg19 NA BE818180 Out-of-frame Inter-chr q13.33 q13.13 120494 ChimerSeq ChiTaRs ChiTaRs METTL17-STOML1 METTL17 chr14 21464209 STOML1 chr15 74279274 Exonic hg19 NA BF922030 Out-of-frame Inter-chr q11.2 q24.1 120495 ChimerSeq ChiTaRs ChiTaRs ABCA7-ZNF317 ABCA7 chr19 1044702 ZNF317 chr19 9259062 Exonic hg19 NA BI027470 Out-of-frame Intra-chr p13.3 p13.2 Transcription factor 120496 ChimerSeq ChiTaRs ChiTaRs N4BP1-N4BP1 N4BP1 chr16 48595490 N4BP1 chr16 48595616 Exonic hg19 NA AA906470 Out-of-frame Intra-chr q12.1 q12.1 120497 ChimerSeq ChiTaRs ChiTaRs ANPEP-ANPEP ANPEP chr15 90347130 ANPEP chr15 90340903 Exonic hg19 NA CB157580 Out-of-frame Intra-chr q26.1 q26.1 120498 ChimerSeq ChiTaRs ChiTaRs MAML2-MAML2 MAML2 chr11 95955172 MAML2 chr11 95954921 Exonic hg19 NA AA525350 Out-of-frame Intra-chr q21 Oncogene q21 Oncogene 120499 ChimerSeq ChiTaRs ChiTaRs SMARCB1-SMARCB1 SMARCB1 chr22 24167564 SMARCB1 chr22 24129259 Exonic hg19 NA CN272300 Out-of-frame Intra-chr q11.23 Oncogene Tumor suppressor gene q11.23 Oncogene Tumor suppressor gene 120500 ChimerSeq ChiTaRs ChiTaRs CAPN3-ANKH CAPN3 chr15 42682251 ANKH chr5 14711581 Exonic hg19 NA BF901090 Out-of-frame Inter-chr q15.1 p15.2 120501 ChimerSeq ChiTaRs ChiTaRs IST1-PRCP IST1 chr16 71958059 PRCP chr11 82535843 Exonic hg19 NA BE767690 Out-of-frame Inter-chr q22.2 q14.1 120502 ChimerSeq ChiTaRs ChiTaRs LYZ-ZNF667 LYZ chr12 69747640 ZNF667 chr19 56952293 Exonic hg19 NA AW770550 Out-of-frame Inter-chr q15 q13.43 Transcription factor 120503 ChimerSeq ChiTaRs ChiTaRs MLF2-OXNAD1 MLF2 chr12 6857248 OXNAD1 chr3 16344931 Exonic hg19 NA BM968310 Out-of-frame Inter-chr p13.31 p25.1 120504 ChimerSeq ChiTaRs ChiTaRs DLGAP4-DLGAP4 DLGAP4 chr20 35146400 DLGAP4 chr20 35138453 Exonic hg19 NA BM683270 Out-of-frame Intra-chr q11.23 q11.23 120505 ChimerSeq ChiTaRs ChiTaRs PFDN4-PFDN4 PFDN4 chr20 52834106 PFDN4 chr20 52829676 Exonic hg19 NA AV748690 Out-of-frame Intra-chr q13.2 q13.2 120506 ChimerSeq ChiTaRs ChiTaRs VAPB-DMD VAPB chr20 56979533 DMD chrX 31213612 Exonic hg19 NA AW993740 Out-of-frame Inter-chr q13.32 p21.1 Tumor suppressor gene 120507 ChimerSeq ChiTaRs ChiTaRs RBM25-RBM25 RBM25 chr14 73572712 RBM25 chr14 73586881 Exonic hg19 NA BE503330 Out-of-frame Intra-chr q24.2 q24.2 120508 ChimerSeq ChiTaRs ChiTaRs MRPL48-MAGOH MRPL48 chr11 73569262 MAGOH chr1 53695914 Exonic hg19 NA BX109950 Out-of-frame Inter-chr q13.4 p32.3 Oncogene 120509 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65266792 MALAT1 chr11 65266607 Exonic hg19 NA AW858530 Out-of-frame Intra-chr q13.1 q13.1 120510 ChimerSeq ChiTaRs ChiTaRs ZNF276-DHCR24 ZNF276 chr16 89806687 DHCR24 chr1 55316392 Exonic hg19 NA BF918420 Out-of-frame Inter-chr q24.3 Transcription factor p32.3 120511 ChimerSeq ChiTaRs ChiTaRs CHGA-RBM14 CHGA chr14 93401638 RBM14 chr11 66394194 Exonic hg19 NA BE467850 3'UTR-3'UTR Inter-chr q32.12 q13.2 Tumor suppressor gene 120512 ChimerSeq ChiTaRs ChiTaRs UBE2V1-UBE2V1 UBE2V1 chr20 48709916 UBE2V1 chr20 48709900 Exonic hg19 NA AW807770 Out-of-frame Intra-chr q13.13 q13.13 120513 ChimerSeq ChiTaRs ChiTaRs PDGFD-PDGFD PDGFD chr11 103961160 PDGFD chr11 103958162 Exonic hg19 NA AA938150 Out-of-frame Intra-chr q22.3 q22.3 120514 ChimerSeq ChiTaRs ChiTaRs GUSBP11-NPIPB7 GUSBP11 chr22 23992418 NPIPB7 chr16 28928415 Exonic hg19 NA AW819480 Out-of-frame Inter-chr q11.23 p12.1 120515 ChimerSeq ChiTaRs ChiTaRs COX8A-SHMT2 COX8A chr11 63744015 SHMT2 chr12 57626576 Exonic hg19 NA BC009320 3'UTR-CDS Inter-chr q13.1 q13.3 120516 ChimerSeq ChiTaRs ChiTaRs CACNA1A-DNAJC13 CACNA1A chr19 13319628 DNAJC13 chr3 132235269 Exonic hg19 NA AA772930 Out-of-frame Inter-chr p13.13 q22.1 120517 ChimerSeq ChiTaRs ChiTaRs MKL1-PBX1 MKL1 chr22 40931066 PBX1 chr1 164820449 Exonic hg19 NA BF089740 Out-of-frame Inter-chr q13.2 q23.3 Oncogene Transcription factor 120518 ChimerSeq ChiTaRs ChiTaRs DDX54-CUX1 DDX54 chr12 113600962 CUX1 chr7 101552797 Exonic hg19 NA BF588530 Out-of-frame Inter-chr q24.13 q22.1 Tumor suppressor gene Transcription factor 120519 ChimerSeq ChiTaRs ChiTaRs NFE2L1-CCDC36 NFE2L1 chr17 46134833 CCDC36 chr3 49280534 Exonic hg19 NA AA913200 Out-of-frame Inter-chr q21.32 Transcription factor p21.31 120520 ChimerSeq ChiTaRs ChiTaRs EI24-RUVBL1 EI24 chr11 125453665 RUVBL1 chr3 127800088 Exonic hg19 NA AW794830 Out-of-frame Inter-chr q24.2 Tumor suppressor gene q21.3 120521 ChimerSeq ChiTaRs ChiTaRs GUSBP11-GUSBP11 GUSBP11 chr22 24057325 GUSBP11 chr22 24032539 Exonic hg19 NA BF335970 Out-of-frame Intra-chr q11.23 q11.23 120522 ChimerSeq ChiTaRs ChiTaRs PIM3-ATP5G2 PIM3 chr22 50357720 ATP5G2 chr12 54069083 Exonic hg19 NA AI307800 3'UTR-CDS Inter-chr q13.33 CAMK:PIM q13.13 120523 ChimerSeq ChiTaRs ChiTaRs TBC1D17-HDAC7 TBC1D17 chr19 50385537 HDAC7 chr12 48189271 Exonic hg19 NA BF326450 Out-of-frame Inter-chr q13.33 q13.11 120524 ChimerSeq ChiTaRs ChiTaRs RNF157-RNF157 RNF157 chr17 74195389 RNF157 chr17 74189679 Exonic hg19 NA BF363980 Out-of-frame Intra-chr q25.1 q25.1 120525 ChimerSeq ChiTaRs ChiTaRs CRLF3-CRLF3 CRLF3 chr17 29114719 CRLF3 chr17 29113978 Exonic hg19 NA T78240 Out-of-frame Intra-chr q11.2 q11.2 120526 ChimerSeq ChiTaRs ChiTaRs OAZ1-PLP1 OAZ1 chr19 2269577 PLP1 chrX 103031802 Exonic hg19 NA DA327340 Out-of-frame Inter-chr p13.3 q22.2 120527 ChimerSeq ChiTaRs ChiTaRs CCDC97-ACAN CCDC97 chr19 41826319 ACAN chr15 89418009 Exonic hg19 NA BG924790 Out-of-frame Inter-chr q13.2 q26.1 120528 ChimerSeq ChiTaRs ChiTaRs SPIRE1-SPIRE1 SPIRE1 chr18 12535549 SPIRE1 chr18 12546790 Exonic hg19 NA BF947000 Out-of-frame Intra-chr p11.21 p11.21 120529 ChimerSeq ChiTaRs ChiTaRs LRRC37B-LRRC37B LRRC37B chr17 30361986 LRRC37B chr17 30362584 Exonic hg19 NA AW947380 Out-of-frame Intra-chr q11.2 q11.2 120530 ChimerSeq ChiTaRs ChiTaRs IPO5-IPO5 IPO5 chr13 98658596 IPO5 chr13 98658460 Exonic hg19 NA AA249390 Out-of-frame Intra-chr q32.2 q32.2 120531 ChimerSeq ChiTaRs ChiTaRs ELMO2-ELMO2 ELMO2 chr20 45009009 ELMO2 chr20 45010560 Exonic hg19 NA DB027600 Out-of-frame Intra-chr q13.12 q13.12 120532 ChimerSeq ChiTaRs ChiTaRs SLC25A1-JUN SLC25A1 chr22 19165347 JUN chr1 59249365 Exonic hg19 NA CD614310 Out-of-frame Inter-chr q11.21 p32.1 Oncogene Transcription factor 120533 ChimerSeq ChiTaRs ChiTaRs PFKL-NFKB2 PFKL chr21 45732023 NFKB2 chr10 104156504 Exonic hg19 NA DB010470 Out-of-frame Inter-chr q22.3 q24.32 Oncogene Transcription factor 120534 ChimerSeq ChiTaRs ChiTaRs GLG1-TMEM127 GLG1 chr16 74486207 TMEM127 chr2 96919781 Exonic hg19 NA AA863230 Out-of-frame Inter-chr q23.1 q11.2 Tumor suppressor gene 120535 ChimerSeq ChiTaRs ChiTaRs ACTN4-U2AF1 ACTN4 chr19 39200953 U2AF1 chr21 44513318 Exonic hg19 NA BI032170 Out-of-frame Inter-chr q22.3 Oncogene 120536 ChimerSeq ChiTaRs ChiTaRs RPS19BP1-C3 RPS19BP1 chr22 39927280 C3 chr19 6677846 Exonic hg19 NA BX091320 Out-of-frame Inter-chr q13.1 p13.3 120537 ChimerSeq ChiTaRs ChiTaRs CARD8-DDX19B CARD8 chr19 48759168 DDX19B chr16 70348805 Exonic hg19 NA DB148330 Out-of-frame Inter-chr q13.33 q22.1 120538 ChimerSeq ChiTaRs ChiTaRs TBCD-NEAT1 TBCD chr17 80887343 NEAT1 chr11 65195157 Exonic hg19 NA BF922050 Out-of-frame Inter-chr q13.1 120539 ChimerSeq ChiTaRs ChiTaRs HSPB8-KDM5B HSPB8 chr12 119631687 KDM5B chr1 202698111 Exonic hg19 NA BF840350 Out-of-frame Inter-chr q24.23 q32.1 Transcription factor 120540 ChimerSeq ChiTaRs ChiTaRs PRKAG1-PRKAG1 PRKAG1 chr12 49396319 PRKAG1 chr12 49396338 Exonic hg19 NA BQ306910 Out-of-frame Intra-chr q13.12 q13.12 120541 ChimerSeq ChiTaRs ChiTaRs KDM6B-KDM6B KDM6B chr17 7758114 KDM6B chr17 7756946 Exonic hg19 NA BM722420 Out-of-frame Intra-chr p13.1 p13.1 120542 ChimerSeq ChiTaRs ChiTaRs GNG2-GNG2 GNG2 chr14 52435921 GNG2 chr14 52435844 Exonic hg19 NA BF886210 Out-of-frame Intra-chr q22.1 q22.1 120543 ChimerSeq ChiTaRs ChiTaRs RPRD1A-RPRD1A RPRD1A chr18 33605374 RPRD1A chr18 33605357 Exonic hg19 NA CA944610 Out-of-frame Intra-chr q12.2 q12.2 120544 ChimerSeq ChiTaRs ChiTaRs KIAA0556-LETM2 KIAA0556 chr16 27767073 LETM2 chr8 38264005 Exonic hg19 NA BC071610 Out-of-frame Inter-chr p12.1 p11.23 120545 ChimerSeq ChiTaRs ChiTaRs SEZ6L-SEZ6L SEZ6L chr22 26632182 SEZ6L chr22 26632482 Exonic hg19 NA BF923760 Out-of-frame Intra-chr q12.1 q12.1 120546 ChimerSeq ChiTaRs ChiTaRs ATP8A2-FECH ATP8A2 chr13 26480254 FECH chr18 55226544 Exonic hg19 NA CV398410 Out-of-frame Inter-chr q12.13 q21.31 120547 ChimerSeq ChiTaRs ChiTaRs TMPO-ARPC1A TMPO chr12 98928839 ARPC1A chr7 98957174 Exonic hg19 NA AW821160 Out-of-frame Inter-chr q23.1 q22.1 120548 ChimerSeq ChiTaRs ChiTaRs RNF166-EPN2 RNF166 chr16 88766131 EPN2 chr17 19209182 Exonic hg19 NA BF870800 Out-of-frame Inter-chr q24.3 p11.2 120549 ChimerSeq ChiTaRs ChiTaRs EIF2B2-EIF2B2 EIF2B2 chr14 75476292 EIF2B2 chr14 75476072 Exonic hg19 NA CA945040 Out-of-frame Intra-chr q24.3 q24.3 120550 ChimerSeq ChiTaRs ChiTaRs AKT2-DNAJC3 AKT2 chr19 40791143 DNAJC3 chr13 96445461 Exonic hg19 NA BF996610 Out-of-frame Inter-chr q13.2 AGC:Akt Oncogene q32.1 120551 ChimerSeq ChiTaRs ChiTaRs HNRNPC-HNRNPC HNRNPC chr14 21707036 HNRNPC chr14 21706233 Exonic hg19 NA AA807200 Out-of-frame Intra-chr q11.2 q11.2 120552 ChimerSeq ChiTaRs ChiTaRs CKAP4-STYXL1 CKAP4 chr12 106633861 STYXL1 chr7 75662465 Exonic hg19 NA BF902200 Out-of-frame Inter-chr q23.3 q11.23 120553 ChimerSeq ChiTaRs ChiTaRs RPL38-RPL38 RPL38 chr17 72206019 RPL38 chr17 72205326 Exonic hg19 NA BM968470 3'UTR-CDS Intra-chr q25.1 q25.1 120554 ChimerSeq ChiTaRs ChiTaRs RNF213-RNF213 RNF213 chr17 78360691 RNF213 chr17 78355657 Exonic hg19 NA BQ364650 CDS-3'UTR Intra-chr q25.3 Oncogene q25.3 Oncogene 120555 ChimerSeq ChiTaRs ChiTaRs ARF3-SLC38A7 ARF3 chr12 49333517 SLC38A7 chr16 58700633 Exonic hg19 NA BG001600 Out-of-frame Inter-chr q13.12 q21 120556 ChimerSeq ChiTaRs ChiTaRs GZF1-PTRH2 GZF1 chr20 23352890 PTRH2 chr17 57774669 Exonic hg19 NA CB243150 Out-of-frame Inter-chr p11.21 Transcription factor q23.1 120557 ChimerSeq ChiTaRs ChiTaRs DONSON-DONSON DONSON chr21 35188042 DONSON chr21 35124134 Exonic hg19 NA BF763320 Out-of-frame Intra-chr q22.11 q22.11 120558 ChimerSeq ChiTaRs ChiTaRs ATP11A-DHX38 ATP11A chr13 113514665 DHX38 chr16 72130152 Exonic hg19 NA BF927490 Out-of-frame Inter-chr q34 q22.2 120559 ChimerSeq ChiTaRs ChiTaRs LGMN-VCAN LGMN chr14 93178052 VCAN chr5 82876748 Exonic hg19 NA BP392190 Out-of-frame Inter-chr q32.12 q14.2 120560 ChimerSeq ChiTaRs ChiTaRs FCGRT-ALCAM FCGRT chr19 50029545 ALCAM chr3 105181383 Exonic hg19 NA BE940440 Out-of-frame Inter-chr q13.33 q13.11 120561 ChimerSeq ChiTaRs ChiTaRs VPS13C-VPS13C VPS13C chr15 62170944 VPS13C chr15 62182383 Exonic hg19 NA BQ335670 Out-of-frame Intra-chr q22.2 q22.2 120562 ChimerSeq ChiTaRs ChiTaRs BZRAP1-AS1-MYC BZRAP1-AS1 chr17 56408849 MYC chr8 128748830 Exonic hg19 NA M31826 Out-of-frame Inter-chr q24.21 Tumor suppressor gene 120563 ChimerSeq ChiTaRs ChiTaRs CDC42BPB-NEDD4L CDC42BPB chr14 103432700 NEDD4L chr18 56001124 Exonic hg19 NA BF834550 In-Frame Inter-chr q32.32 q21.31 Tumor suppressor gene 120564 ChimerSeq ChiTaRs ChiTaRs RBM25-RBM25 RBM25 chr14 73577612 RBM25 chr14 73572711 Exonic hg19 NA AW382160 Out-of-frame Intra-chr q24.2 q24.2 120565 ChimerSeq ChiTaRs ChiTaRs FOXO1-RB1CC1 FOXO1 chr13 41134794 RB1CC1 chr8 53536323 Exonic hg19 NA BE767460 Out-of-frame Inter-chr q14.11 Oncogene Tumor suppressor gene Transcription factor q11.23 Tumor suppressor gene 120566 ChimerSeq ChiTaRs ChiTaRs ACTG1-MROH7 ACTG1 chr17 79477407 MROH7 chr1 55126838 Exonic hg19 NA BF932930 Out-of-frame Inter-chr q25.3 p32.3 120567 ChimerSeq ChiTaRs ChiTaRs FGD6-ARHGAP24 FGD6 chr12 95491543 ARHGAP24 chr4 86915995 Exonic hg19 NA AW749210 Out-of-frame Inter-chr q22 q21.23 120568 ChimerSeq ChiTaRs ChiTaRs RCN3-PAPPA RCN3 chr19 50046507 PAPPA chr9 119162672 Exonic hg19 NA AW962470 Out-of-frame Inter-chr q13.33 q33.1 120569 ChimerSeq ChiTaRs ChiTaRs THSD4-THSD4 THSD4 chr15 71587170 THSD4 chr15 71586685 Exonic hg19 NA AW361930 Out-of-frame Intra-chr q23 q23 120570 ChimerSeq ChiTaRs ChiTaRs PABPC1L-MRPL39 PABPC1L chr20 43567081 MRPL39 chr21 26959956 Exonic hg19 NA BE179670 Out-of-frame Inter-chr q13.12 q21.3 120571 ChimerSeq ChiTaRs ChiTaRs PRPF8-PRPF8 PRPF8 chr17 1564077 PRPF8 chr17 1562667 Exonic hg19 NA BF773000 Out-of-frame Intra-chr 120572 ChimerSeq ChiTaRs ChiTaRs NPIPB7-NPIPB7 NPIPB7 chr16 29001745 NPIPB7 chr16 28997986 Exonic hg19 NA AW368280 Out-of-frame Intra-chr p12.1 p12.1 120573 ChimerSeq ChiTaRs ChiTaRs NFS1-HGD NFS1 chr20 34276919 HGD chr3 120389826 Exonic hg19 NA DW417230 Out-of-frame Inter-chr q11.22 q13.33 120574 ChimerSeq ChiTaRs ChiTaRs HECTD1-PKNOX1 HECTD1 chr14 31604737 PKNOX1 chr21 44450293 Exonic hg19 NA BE084180 Out-of-frame Inter-chr q12 q22.3 Tumor suppressor gene Transcription factor 120575 ChimerSeq ChiTaRs ChiTaRs ANXA2-CREM ANXA2 chr15 60643450 CREM chr10 35416399 Exonic hg19 NA CD367600 CDS-5'UTR Inter-chr q22.2 p11.21 Tumor suppressor gene Transcription factor 120576 ChimerSeq ChiTaRs ChiTaRs RPSAP52-WIF1 RPSAP52 chr12 66345196 WIF1 chr12 65444406 Exonic hg19 NA EF058195 Out-of-frame Intra-chr q14.3 q14.3 Tumor suppressor gene 120577 ChimerSeq ChiTaRs ChiTaRs SMARCB1-SMARCB1 SMARCB1 chr22 24129430 SMARCB1 chr22 24159069 Exonic hg19 NA BF355240 Out-of-frame Intra-chr q11.23 Oncogene Tumor suppressor gene q11.23 Oncogene Tumor suppressor gene 120578 ChimerSeq ChiTaRs ChiTaRs IDH2-IDH2 IDH2 chr15 90637780 IDH2 chr15 90639021 Exonic hg19 NA AV658020 Out-of-frame Intra-chr q26.1 Oncogene q26.1 Oncogene 120579 ChimerSeq ChiTaRs ChiTaRs MYH10-GAS8 MYH10 chr17 8512590 GAS8 chr16 90096450 Exonic hg19 NA BE153280 Out-of-frame Inter-chr p13.1 q24.3 120580 ChimerSeq ChiTaRs ChiTaRs DMXL2-MTURN DMXL2 chr15 51814995 MTURN chr7 30194304 Exonic hg19 NA BF925050 Out-of-frame Inter-chr q21.2 p14.3 120581 ChimerSeq ChiTaRs ChiTaRs CADM4-RAB11FIP2 CADM4 chr19 44126696 RAB11FIP2 chr10 119799656 Exonic hg19 NA CB048460 Out-of-frame Inter-chr q13.31 Tumor suppressor gene q26.11 120582 ChimerSeq ChiTaRs ChiTaRs CMAS-ALB CMAS chr12 22215952 ALB chr4 74270004 Exonic hg19 NA AF119840 Out-of-frame Inter-chr p12.1 q13.3 120583 ChimerSeq ChiTaRs ChiTaRs COTL1-TMEM232 COTL1 chr16 84616629 TMEM232 chr5 110036315 Exonic hg19 NA BF750130 Out-of-frame Inter-chr q24.1 q22.1 120584 ChimerSeq ChiTaRs ChiTaRs RHPN2-CD2AP RHPN2 chr19 33469801 CD2AP chr6 47489367 Exonic hg19 NA AA470830 Out-of-frame Inter-chr q13.11 p12.3 120585 ChimerSeq ChiTaRs ChiTaRs WIBG-WIBG WIBG chr12 56295862 WIBG chr12 56295358 Exonic hg19 NA BF685450 Out-of-frame Intra-chr 12q13.2 12q13.2 120586 ChimerSeq ChiTaRs ChiTaRs DGKH-DGKH DGKH chr13 42742138 DGKH chr13 42741978 Exonic hg19 NA BF373800 Out-of-frame Intra-chr q14.11 q14.11 120587 ChimerSeq ChiTaRs ChiTaRs GAS7-DENND5A GAS7 chr17 9817600 DENND5A chr11 9170033 Exonic hg19 NA BE502080 Out-of-frame Inter-chr p13.1 p15.4 120588 ChimerSeq ChiTaRs ChiTaRs ARCN1-JAKMIP2 ARCN1 chr11 118473643 JAKMIP2 chr5 147091602 Exonic hg19 NA AI990540 Out-of-frame Inter-chr q23.3 q32 120589 ChimerSeq ChiTaRs ChiTaRs FAM118A-SETDB1 FAM118A chr22 45712806 SETDB1 chr1 150935115 Exonic hg19 NA BG953460 Out-of-frame Inter-chr q13.31 q21.3 Transcription factor 120590 ChimerSeq ChiTaRs ChiTaRs FBXW8-FBXW8 FBXW8 chr12 117429183 FBXW8 chr12 117429045 Exonic hg19 NA AW891870 Out-of-frame Intra-chr q24.22 q24.22 120591 ChimerSeq ChiTaRs ChiTaRs LEO1-LEO1 LEO1 chr15 52249428 LEO1 chr15 52249442 Exonic hg19 NA BU608550 Out-of-frame Intra-chr q21.2 q21.2 120592 ChimerSeq ChiTaRs ChiTaRs PRMT5-PRMT5 PRMT5 chr14 23395442 PRMT5 chr14 23390106 Exonic hg19 NA BE063240 Out-of-frame Intra-chr q11.2 q11.2 120593 ChimerSeq ChiTaRs ChiTaRs CYFIP1-UBR4 CYFIP1 chr15 22935943 UBR4 chr1 19423732 Exonic hg19 NA BF748810 Out-of-frame Inter-chr q11.2 p36.13 120594 ChimerSeq ChiTaRs ChiTaRs SPAG9-SPAG9 SPAG9 chr17 49039938 SPAG9 chr17 49039922 Exonic hg19 NA AA746760 Out-of-frame Intra-chr q21.33 q21.33 120595 ChimerSeq ChiTaRs ChiTaRs MLL2-MLL2 MLL2 chr12 49426087 MLL2 chr12 49425611 Exonic hg19 NA BG002170 Out-of-frame Intra-chr 120596 ChimerSeq ChiTaRs ChiTaRs COL18A1-CALM3 COL18A1 chr21 46933634 CALM3 chr19 47104576 Exonic hg19 NA BU931140 3'UTR-5'UTR Inter-chr q22.3 q13.32 120597 ChimerSeq ChiTaRs ChiTaRs BFAR-BFAR BFAR chr16 14749020 BFAR chr16 14749017 Exonic hg19 NA CR746500 Out-of-frame Intra-chr 120598 ChimerSeq ChiTaRs ChiTaRs BICD1-BICD1 BICD1 chr12 32481291 BICD1 chr12 32481259 Exonic hg19 NA BM722330 Out-of-frame Intra-chr p11.21 p11.21 120599 ChimerSeq ChiTaRs ChiTaRs KPTN-PSKH1 KPTN chr19 47978668 PSKH1 chr16 67943243 Exonic hg19 NA AI360240 Out-of-frame Inter-chr q13.32 q22.1 CAMK:PSK 120600 ChimerSeq ChiTaRs ChiTaRs CDK4-RPL4 CDK4 chr12 58145120 RPL4 chr15 66791666 Exonic hg19 NA BC001010 Out-of-frame Inter-chr q14.1 CMGC:CDK Oncogene q22.31 120601 ChimerSeq ChiTaRs ChiTaRs ZNF587-PARN ZNF587 chr19 58281246 PARN chr16 14540758 Exonic hg19 NA DA139780 Out-of-frame Inter-chr q13.43 Transcription factor 120602 ChimerSeq ChiTaRs ChiTaRs PAK7-AARS PAK7 chr20 9596298 AARS chr16 70299507 Exonic hg19 NA BF110430 Out-of-frame Inter-chr q22.1 120603 ChimerSeq ChiTaRs ChiTaRs PANK2-PANK2 PANK2 chr20 3870357 PANK2 chr20 3893104 Exonic hg19 NA AI340170 Out-of-frame Intra-chr p13 p13 120604 ChimerSeq ChiTaRs ChiTaRs PIGN-AAK1 PIGN chr18 59752061 AAK1 chr2 69724705 Exonic hg19 NA AW862570 Out-of-frame Inter-chr q21.33 p13.3 Other:NAK 120605 ChimerSeq ChiTaRs ChiTaRs PHB2-PHB2 PHB2 chr12 7076931 PHB2 chr12 7074792 Exonic hg19 NA AW265760 Out-of-frame Intra-chr p13.31 p13.31 120606 ChimerSeq ChiTaRs ChiTaRs LRCH1-LRCH1 LRCH1 chr13 47155847 LRCH1 chr13 47155487 Exonic hg19 NA BF827060 Out-of-frame Intra-chr q14.13 q14.13 120607 ChimerSeq ChiTaRs ChiTaRs SLC5A2-SLC5A2 SLC5A2 chr16 31501239 SLC5A2 chr16 31501864 Exonic hg19 NA T29710 Out-of-frame Intra-chr p11.2 p11.2 120608 ChimerSeq ChiTaRs ChiTaRs BBS2-EFCAB2 BBS2 chr16 56534284 EFCAB2 chr1 245141471 Exonic hg19 NA BF999810 Out-of-frame Inter-chr q13 q44 120609 ChimerSeq ChiTaRs ChiTaRs LRCH1-PIK3R1 LRCH1 chr13 47155523 PIK3R1 chr5 67593268 Exonic hg19 NA BF849250 Out-of-frame Inter-chr q14.13 q13.1 Oncogene 120610 ChimerSeq ChiTaRs ChiTaRs OASL-BOLA2 OASL chr12 121476622 BOLA2 chr16 30194946 Exonic hg19 NA BC064330 Out-of-frame Inter-chr q24.31 p11.2 120611 ChimerSeq ChiTaRs ChiTaRs DNAH10-DDX42 DNAH10 chr12 124416281 DDX42 chr17 61885198 Exonic hg19 NA BQ330160 Out-of-frame Inter-chr q23.3 120612 ChimerSeq ChiTaRs ChiTaRs PPP1R1B-RAB12 PPP1R1B chr17 37790274 RAB12 chr18 8633367 Exonic hg19 NA BE082820 Out-of-frame Inter-chr q12 Tumor suppressor gene p11.22 120613 ChimerSeq ChiTaRs ChiTaRs HBA2-USP34 HBA2 chr16 223709 USP34 chr2 61498746 Exonic hg19 NA T53180 3'UTR-CDS Inter-chr p13.3 p15 120614 ChimerSeq ChiTaRs ChiTaRs SF3B3-SF3B3 SF3B3 chr16 70603995 SF3B3 chr16 70602340 Exonic hg19 NA BE774040 Out-of-frame Intra-chr q22.1 q22.1 120615 ChimerSeq ChiTaRs ChiTaRs NPEPL1-NPEPL1 NPEPL1 chr20 57287703 NPEPL1 chr20 57287834 Exonic hg19 NA BI044370 Out-of-frame Intra-chr q13.32 q13.32 120616 ChimerSeq ChiTaRs ChiTaRs CTRL-CTRL CTRL chr16 67964696 CTRL chr16 67963780 Exonic hg19 NA BM919850 Out-of-frame Intra-chr q22.1 q22.1 120617 ChimerSeq ChiTaRs ChiTaRs CLEC16A-OTUB2 CLEC16A chr16 11251086 OTUB2 chr14 94512589 Exonic hg19 NA AW016280 Out-of-frame Inter-chr p13.13 120618 ChimerSeq ChiTaRs ChiTaRs SMAD3-EXOC4 SMAD3 chr15 67483623 EXOC4 chr7 133724335 Exonic hg19 NA BG977350 Out-of-frame Inter-chr q22.33 Transcription factor q33 120619 ChimerSeq ChiTaRs ChiTaRs CCND2-KNDC1 CCND2 chr12 4403268 KNDC1 chr10 134999935 Exonic hg19 NA BQ338280 Out-of-frame Inter-chr p13.32 Oncogene q26.3 120620 ChimerSeq ChiTaRs ChiTaRs BID-NOP58 BID chr22 18246572 NOP58 chr2 203167681 Exonic hg19 NA BU678510 Out-of-frame Inter-chr q11.21 q33.1 120621 ChimerSeq ChiTaRs ChiTaRs CSNK1G1-TRA2B CSNK1G1 chr15 64499795 TRA2B chr3 185635171 Exonic hg19 NA BF812640 Out-of-frame Inter-chr q22.31 q27.2 120622 ChimerSeq ChiTaRs ChiTaRs RTTN-PKP2 RTTN chr18 67731326 PKP2 chr12 32948608 Exonic hg19 NA C04990 Out-of-frame Inter-chr q22.2 p11.21 120623 ChimerSeq ChiTaRs ChiTaRs DACH1-SMAD4 DACH1 chr13 72166537 SMAD4 chr18 48591912 Exonic hg19 NA BE839020 Out-of-frame Inter-chr q21.33 Tumor suppressor gene Transcription factor q21.2 Oncogene Tumor suppressor gene Transcription factor 120624 ChimerSeq ChiTaRs ChiTaRs ZNF536-ALB ZNF536 chr19 30864332 ALB chr4 74279313 Exonic hg19 NA AF118090 Out-of-frame Inter-chr q12 Transcription factor q13.3 120625 ChimerSeq ChiTaRs ChiTaRs PRH1-PRR4-MALAT1 PRH1-PRR4 chr12 11183693 MALAT1 chr11 65267970 Exonic hg19 NA BE694480 Out-of-frame Inter-chr q13.1 120626 ChimerSeq ChiTaRs ChiTaRs FKBP3-PIP5K1C FKBP3 chr14 45603665 PIP5K1C chr19 3630214 Exonic hg19 NA M90820 Out-of-frame Inter-chr q21.2 p13.3 120627 ChimerSeq ChiTaRs ChiTaRs C21orf58-C21orf58 C21orf58 chr21 47721944 C21orf58 chr21 47737163 Exonic hg19 NA CB856840 Out-of-frame Intra-chr q22.3 q22.3 120628 ChimerSeq ChiTaRs ChiTaRs C20orf27-FZD7 C20orf27 chr20 3734307 FZD7 chr2 202902569 Exonic hg19 NA H27770 Out-of-frame Inter-chr p13 q33.1 120629 ChimerSeq ChiTaRs ChiTaRs MLX-MLX MLX chr17 40723674 MLX chr17 40723723 Exonic hg19 NA BE085890 Out-of-frame Intra-chr q21.2 Transcription factor q21.2 Transcription factor 120630 ChimerSeq ChiTaRs ChiTaRs CALM1-CANX CALM1 chr14 90873043 CANX chr5 179146676 Exonic hg19 NA BF949860 Out-of-frame Inter-chr q32.11 120631 ChimerSeq ChiTaRs ChiTaRs MED13-BRWD1 MED13 chr17 60036745 BRWD1 chr21 40668363 Exonic hg19 NA AV730350 Out-of-frame Inter-chr q23.2 q22.2 120632 ChimerSeq ChiTaRs ChiTaRs NUMB-TGOLN2 NUMB chr14 73756630 TGOLN2 chr2 85545740 Exonic hg19 NA BG996670 Out-of-frame Inter-chr q24.3 Tumor suppressor gene p11.2 120633 ChimerSeq ChiTaRs ChiTaRs TSPAN9-CACYBP TSPAN9 chr12 3320830 CACYBP chr1 174979168 Exonic hg19 NA BG942830 Out-of-frame Inter-chr p13.33 q25.1 120634 ChimerSeq ChiTaRs ChiTaRs SUPT6H-SUPT6H SUPT6H chr17 27020787 SUPT6H chr17 27017944 Exonic hg19 NA BF086370 Out-of-frame Intra-chr q11.2 q11.2 120635 ChimerSeq ChiTaRs ChiTaRs SLC25A15-COL1A1 SLC25A15 chr13 41386451 COL1A1 chr17 48261499 Exonic hg19 NA BM723940 Out-of-frame Inter-chr q14.11 q21.33 Oncogene 120636 ChimerSeq ChiTaRs ChiTaRs HSP90AA1-RNF31 HSP90AA1 chr14 102551263 RNF31 chr14 24635672 Exonic hg19 NA BU675940 Out-of-frame Intra-chr q32.31 Oncogene q12 120637 ChimerSeq ChiTaRs ChiTaRs VDR-VDR VDR chr12 48237354 VDR chr12 48236553 Exonic hg19 NA AA843290 Out-of-frame Intra-chr q13.11 Tumor suppressor gene Transcription factor q13.11 Tumor suppressor gene Transcription factor 120638 ChimerSeq ChiTaRs ChiTaRs IVD-MALAT1 IVD chr15 40713505 MALAT1 chr11 65267923 Exonic hg19 NA AI928420 Out-of-frame Inter-chr q15.1 q13.1 120639 ChimerSeq ChiTaRs ChiTaRs SSH2-SSH2 SSH2 chr17 28256266 SSH2 chr17 28256282 Exonic hg19 NA CV353650 Out-of-frame Intra-chr q11.2 q11.2 120640 ChimerSeq ChiTaRs ChiTaRs ROBO3-ROBO3 ROBO3 chr11 124751362 ROBO3 chr11 124750443 Exonic hg19 NA AI279880 Out-of-frame Intra-chr q24.2 q24.2 120641 ChimerSeq ChiTaRs ChiTaRs C20orf96-MLL2 C20orf96 chr20 256679 MLL2 chr12 49437684 Exonic hg19 NA AA862350 Out-of-frame Inter-chr p13 120642 ChimerSeq ChiTaRs ChiTaRs ZNF217-TAOK1 ZNF217 chr20 52184405 TAOK1 chr17 27779435 Exonic hg19 NA AW794770 Out-of-frame Inter-chr q13.2 Oncogene Transcription factor q11.2 120643 ChimerSeq ChiTaRs ChiTaRs SLC39A11-ARAP1 SLC39A11 chr17 71083936 ARAP1 chr11 72412908 Exonic hg19 NA BF737610 Out-of-frame Inter-chr q25.1 q13.4 120644 ChimerSeq ChiTaRs ChiTaRs TBC1D24-TBC1D24 TBC1D24 chr16 2570219 TBC1D24 chr16 2564070 Exonic hg19 NA AI114460 Out-of-frame Intra-chr p13.3 p13.3 120645 ChimerSeq ChiTaRs ChiTaRs RNASE1-LOC728730 RNASE1 chr14 21271007 LOC728730 chr2 39664363 Exonic hg19 NA DB054670 Out-of-frame Inter-chr q11.2 120646 ChimerSeq ChiTaRs ChiTaRs WIPF2-WIPF2 WIPF2 chr17 38438516 WIPF2 chr17 38436789 Exonic hg19 NA BM718490 Out-of-frame Intra-chr q21.2 q21.2 120647 ChimerSeq ChiTaRs ChiTaRs IFT27-SRRM2 IFT27 chr22 37154345 SRRM2 chr16 2817109 Exonic hg19 NA AI671880 Out-of-frame Inter-chr q12.3 p13.3 120648 ChimerSeq ChiTaRs ChiTaRs RSRC2-HECTD1 RSRC2 chr12 122995976 HECTD1 chr14 31637643 Exonic hg19 NA BF088850 Out-of-frame Inter-chr q24.31 q12 120649 ChimerSeq ChiTaRs ChiTaRs SREBF1-C12orf10 SREBF1 chr17 17722547 C12orf10 chr12 53696817 Exonic hg19 NA BG009780 Out-of-frame Inter-chr p11.2 Transcription factor q13.13 120650 ChimerSeq ChiTaRs ChiTaRs CASC4-CASC4 CASC4 chr15 44626433 CASC4 chr15 44628693 Exonic hg19 NA CV325390 Out-of-frame Intra-chr q15.3 q15.3 120651 ChimerSeq ChiTaRs ChiTaRs SLC12A1-PSPH SLC12A1 chr15 48543967 PSPH chr7 56169266 Exonic hg19 NA BC020860 CDS-5'UTR Inter-chr q21.1 p11.2 120652 ChimerSeq ChiTaRs ChiTaRs USP15-ZCCHC11 USP15 chr12 62710289 ZCCHC11 chr1 52998396 Exonic hg19 NA CV416380 Out-of-frame Inter-chr q14.1 p32.3 120653 ChimerSeq ChiTaRs ChiTaRs TMEM120B-PLEKHO1 TMEM120B chr12 122218912 PLEKHO1 chr1 150126370 Exonic hg19 NA BE763340 Out-of-frame Inter-chr q24.31 q21.2 Tumor suppressor gene 120654 ChimerSeq ChiTaRs ChiTaRs RMI2-MED17 RMI2 chr16 11445022 MED17 chr11 93517552 Exonic hg19 NA BG822170 Out-of-frame Inter-chr p13.13 q21 120655 ChimerSeq ChiTaRs ChiTaRs MOK-MOK MOK chr14 102699014 MOK chr14 102699038 Exonic hg19 NA AA452570 Out-of-frame Intra-chr q32.31 CMGC:RCK q32.31 CMGC:RCK 120656 ChimerSeq ChiTaRs ChiTaRs CASC3-EXOSC10 CASC3 chr17 38323637 EXOSC10 chr1 11140178 Exonic hg19 NA AW377350 Out-of-frame Inter-chr q21.1 p36.22 120657 ChimerSeq ChiTaRs ChiTaRs SMARCC2-SMARCC2 SMARCC2 chr12 56572273 SMARCC2 chr12 56565466 Exonic hg19 NA BM458720 Out-of-frame Intra-chr q13.2 q13.2 120658 ChimerSeq ChiTaRs ChiTaRs SOS2-SOS2 SOS2 chr14 50630117 SOS2 chr14 50630146 Exonic hg19 NA AA657600 Out-of-frame Intra-chr q21.3 q21.3 120659 ChimerSeq ChiTaRs ChiTaRs ECH1-ECH1 ECH1 chr19 39306170 ECH1 chr19 39306336 Exonic hg19 NA BF911170 Out-of-frame Intra-chr 120660 ChimerSeq ChiTaRs ChiTaRs GPRC5C-GPRC5C GPRC5C chr17 72443266 GPRC5C chr17 72443278 Exonic hg19 NA D82490 Out-of-frame Intra-chr q25.1 q25.1 120661 ChimerSeq ChiTaRs ChiTaRs BBS10-FGFR3 BBS10 chr12 76740240 FGFR3 chr4 1810437 Exonic hg19 NA BF842660 Out-of-frame Inter-chr q21.2 p16.3 TK:FGFR Oncogene 120662 ChimerSeq ChiTaRs ChiTaRs SIK3-SPATS2L SIK3 chr11 116923424 SPATS2L chr2 201277059 Exonic hg19 NA BF911180 Out-of-frame Inter-chr q23.3 q33.1 120663 ChimerSeq ChiTaRs ChiTaRs ANKRD11-RNF135 ANKRD11 chr16 89502198 RNF135 chr17 29314014 Exonic hg19 NA BF376400 Out-of-frame Inter-chr q24.3 q11.2 120664 ChimerSeq ChiTaRs ChiTaRs KIAA0226L-RIN2 KIAA0226L chr13 46964688 RIN2 chr20 19874039 Exonic hg19 NA BG978660 Out-of-frame Inter-chr p11.23 120665 ChimerSeq ChiTaRs ChiTaRs TCF20-TCF20 TCF20 chr22 42556269 TCF20 chr22 42557292 Exonic hg19 NA AI693830 Out-of-frame Intra-chr Transcription factor Transcription factor 120666 ChimerSeq ChiTaRs ChiTaRs SNAP25-CREBBP SNAP25 chr20 10287974 CREBBP chr16 3784039 Exonic hg19 NA BI033650 Out-of-frame Inter-chr p12.2 p13.3 Oncogene Tumor suppressor gene 120667 ChimerSeq ChiTaRs ChiTaRs CIRBP-CIRBP CIRBP chr19 1271377 CIRBP chr19 1270937 Exonic hg19 NA AW592560 Out-of-frame Intra-chr p13.3 p13.3 120668 ChimerSeq ChiTaRs ChiTaRs PFKL-PFKL PFKL chr21 45732881 PFKL chr21 45745859 Exonic hg19 NA BI024780 Out-of-frame Intra-chr q22.3 q22.3 120669 ChimerSeq ChiTaRs ChiTaRs MED13L-MAP1B MED13L chr12 116595660 MAP1B chr5 71504071 Exonic hg19 NA BF934070 Out-of-frame Inter-chr q24.21 q13.2 120670 ChimerSeq ChiTaRs ChiTaRs SYNRG-SYNRG SYNRG chr17 35877061 SYNRG chr17 35875858 Exonic hg19 NA BU685120 Out-of-frame Intra-chr 120671 ChimerSeq ChiTaRs ChiTaRs C19orf60-NR4A2 C19orf60 chr19 18703146 NR4A2 chr2 157186240 Exonic hg19 NA BF059310 Out-of-frame Inter-chr p13.11 q24.1 Transcription factor 120672 ChimerSeq ChiTaRs ChiTaRs SUDS3-LOC100506548 SUDS3 chr12 118849215 LOC100506548 chr5 40825600 Exonic hg19 NA BG927120 Out-of-frame Inter-chr q24.23 120673 ChimerSeq ChiTaRs ChiTaRs ERBB3-ERBB3 ERBB3 chr12 56494997 ERBB3 chr12 56478856 Exonic hg19 NA BF369721 Out-of-frame Intra-chr q13.2 Oncogene q13.2 Oncogene 120674 ChimerSeq ChiTaRs ChiTaRs CHMP4A-TM9SF1 CHMP4A chr14 24684997 TM9SF1 chr14 24683145 Exonic hg19 NA BF312811 Out-of-frame Intra-chr q12 q12 120675 ChimerSeq ChiTaRs ChiTaRs TPSAB1-MYADM TPSAB1 chr16 1292422 MYADM chr19 54377410 Exonic hg19 NA BF848001 Out-of-frame Inter-chr p13.3 q13.42 120676 ChimerSeq ChiTaRs ChiTaRs B2M-B2M B2M chr15 45010343 B2M chr15 45009930 Exonic hg19 NA BF590711 Out-of-frame Intra-chr Oncogene Oncogene 120677 ChimerSeq ChiTaRs ChiTaRs LAIR1-LOC388796 LAIR1 chr19 54866472 LOC388796 chr20 37050671 Exonic hg19 NA AW294311 Out-of-frame Inter-chr 120678 ChimerSeq ChiTaRs ChiTaRs GPRC5A-DSP GPRC5A chr12 13061511 DSP chr6 7585413 Exonic hg19 NA BE706031 Out-of-frame Inter-chr p13.1 Tumor suppressor gene p24.3 Tumor suppressor gene 120679 ChimerSeq ChiTaRs ChiTaRs ATP2A2-ATP2A2 ATP2A2 chr12 110738722 ATP2A2 chr12 110738976 Exonic hg19 NA CV315141 Out-of-frame Intra-chr q24.11 q24.11 120680 ChimerSeq ChiTaRs ChiTaRs EEF2-EEF2 EEF2 chr19 3981992 EEF2 chr19 3981995 Exonic hg19 NA CD580061 Out-of-frame Intra-chr p13.3 p13.3 120681 ChimerSeq ChiTaRs ChiTaRs SLC7A5-KDM6A SLC7A5 chr16 87883161 KDM6A chrX 44873850 Exonic hg19 NA BF369111 Out-of-frame Inter-chr q24.2 p11.3 Oncogene Tumor suppressor gene 120682 ChimerSeq ChiTaRs ChiTaRs KIAA1731-XRCC1 KIAA1731 chr11 93455011 XRCC1 chr19 44047536 Exonic hg19 NA AA693621 Out-of-frame Inter-chr q13.31 120683 ChimerSeq ChiTaRs ChiTaRs DHX34-DHX34 DHX34 chr19 47884192 DHX34 chr19 47863271 Exonic hg19 NA BM931341 Out-of-frame Intra-chr q13.32 q13.32 120684 ChimerSeq ChiTaRs ChiTaRs TRIOBP-SLCO3A1 TRIOBP chr22 38170129 SLCO3A1 chr15 92571879 Exonic hg19 NA AA927441 Out-of-frame Inter-chr q13.1 q26.1 120685 ChimerSeq ChiTaRs ChiTaRs NUMA1-ITM2B NUMA1 chr11 71720234 ITM2B chr13 48807284 Exonic hg19 NA DB005631 Out-of-frame Inter-chr q13.4 Oncogene q14.2 120686 ChimerSeq ChiTaRs ChiTaRs GPATCH8-GPATCH8 GPATCH8 chr17 42567299 GPATCH8 chr17 42567400 Exonic hg19 NA BU852841 Out-of-frame Intra-chr q21.31 q21.31 120687 ChimerSeq ChiTaRs ChiTaRs ZCCHC2-ZCCHC2 ZCCHC2 chr18 60245314 ZCCHC2 chr18 60244767 Exonic hg19 NA BM978661 Out-of-frame Intra-chr q21.33 q21.33 120688 ChimerSeq ChiTaRs ChiTaRs EFTUD2-MAP2 EFTUD2 chr17 42957998 MAP2 chr2 210596373 Exonic hg19 NA AW498581 Out-of-frame Inter-chr q21.31 q34 120689 ChimerSeq ChiTaRs ChiTaRs TLCD2-RAP1B TLCD2 chr17 1608418 RAP1B chr12 69020556 Exonic hg19 NA CB243131 Out-of-frame Inter-chr q15 120690 ChimerSeq ChiTaRs ChiTaRs UFM1-UFM1 UFM1 chr13 38936102 UFM1 chr13 38935673 Exonic hg19 NA BE004601 Out-of-frame Intra-chr q13.3 q13.3 120691 ChimerSeq ChiTaRs ChiTaRs PIWIL4-LGR4 PIWIL4 chr11 94354528 LGR4 chr11 27398729 Exonic hg19 NA BE927951 Out-of-frame Intra-chr q21 p14.1 120692 ChimerSeq ChiTaRs ChiTaRs SYT12-SH3GLB1 SYT12 chr11 66802257 SH3GLB1 chr1 87210310 Exonic hg19 NA BF995061 Out-of-frame Inter-chr q13.2 p22.3 Tumor suppressor gene 120693 ChimerSeq ChiTaRs ChiTaRs PITPNB-CCDC117 PITPNB chr22 28315235 CCDC117 chr22 29176934 Exonic hg19 NA DB095411 Out-of-frame Intra-chr q12.1 q12.1 120694 ChimerSeq ChiTaRs ChiTaRs NAP1L1-NAP1L1 NAP1L1 chr12 76441330 NAP1L1 chr12 76440774 Exonic hg19 NA AI866991 Out-of-frame Intra-chr q21.2 q21.2 120695 ChimerSeq ChiTaRs ChiTaRs PML-PML PML chr15 74337985 PML chr15 74333135 Exonic hg19 NA AF230401 Out-of-frame Intra-chr q24.1 Oncogene Tumor suppressor gene q24.1 Oncogene Tumor suppressor gene 120696 ChimerSeq ChiTaRs ChiTaRs PSME3-PSME3 PSME3 chr17 40995265 PSME3 chr17 40995091 Exonic hg19 NA BM971211 Out-of-frame Intra-chr q21.31 q21.31 120697 ChimerSeq ChiTaRs ChiTaRs KIAA0430-KIAA0430 KIAA0430 chr16 15698116 KIAA0430 chr16 15695987 Exonic hg19 NA AA526011 Out-of-frame Intra-chr 120698 ChimerSeq ChiTaRs ChiTaRs KTN1-KTN1 KTN1 chr14 56079113 KTN1 chr14 56083331 Exonic hg19 NA AW291751 Out-of-frame Intra-chr q22.3 q22.3 120699 ChimerSeq ChiTaRs ChiTaRs AMFR-PRRC2A AMFR chr16 56396073 PRRC2A chr6 2982653 Exonic hg19 NA BI014521 Out-of-frame Inter-chr q13 120700 ChimerSeq ChiTaRs ChiTaRs PCBP2-PCBP2 PCBP2 chr12 53874833 PCBP2 chr12 53874171 Exonic hg19 NA CX781671 Out-of-frame Intra-chr q13.13 q13.13 120701 ChimerSeq ChiTaRs ChiTaRs RAD9B-B2M RAD9B chr12 110954428 B2M chr15 45007661 Exonic hg19 NA EL594131 Out-of-frame Inter-chr q24.11 Oncogene 120702 ChimerSeq ChiTaRs ChiTaRs PIK3C3-LOC100132273 PIK3C3 chr18 39661363 LOC100132273 chr22 42504846 Exonic hg19 NA CB124531 Out-of-frame Inter-chr q12.3 120703 ChimerSeq ChiTaRs ChiTaRs TPM4-CNNM2 TPM4 chr19 16212926 CNNM2 chr10 104783041 Exonic hg19 NA N99591 Out-of-frame Inter-chr p13.12 q24.32 120704 ChimerSeq ChiTaRs ChiTaRs CUX2-GRN CUX2 chr12 111665731 GRN chr17 42428730 Exonic hg19 NA BF892251 Out-of-frame Inter-chr q24.11 Transcription factor q21.31 120705 ChimerSeq ChiTaRs ChiTaRs SMAD6-CGA SMAD6 chr15 67040422 CGA chr6 87795378 Exonic hg19 NA BQ367091 Out-of-frame Inter-chr q22.31 q14.3 120706 ChimerSeq ChiTaRs ChiTaRs GAS7-CHRM3 GAS7 chr17 9977178 CHRM3 chr1 239906900 Exonic hg19 NA BE149291 Out-of-frame Inter-chr p13.1 q43 120707 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65267817 MALAT1 chr11 65267766 Exonic hg19 NA AW580841 Out-of-frame Intra-chr q13.1 q13.1 120708 ChimerSeq ChiTaRs ChiTaRs ACAN-ACAN ACAN chr15 89401668 ACAN chr15 89401655 Exonic hg19 NA BG900931 Out-of-frame Intra-chr q26.1 q26.1 120709 ChimerSeq ChiTaRs ChiTaRs LMF1-BZRAP1 LMF1 chr16 1025987 BZRAP1 chr17 56387327 Exonic hg19 NA AI653251 5'UTR-CDS Inter-chr p13.3 120710 ChimerSeq ChiTaRs ChiTaRs TSHZ1-TSHZ1 TSHZ1 chr18 72998634 TSHZ1 chr18 72997898 Exonic hg19 NA AW631381 Out-of-frame Intra-chr q22.3 Transcription factor q22.3 Transcription factor 120711 ChimerSeq ChiTaRs ChiTaRs TNRC6B-TNRC6B TNRC6B chr22 40701103 TNRC6B chr22 40695662 Exonic hg19 NA BQ893691 Out-of-frame Intra-chr q13.1 q13.1 120712 ChimerSeq ChiTaRs ChiTaRs CYB5D1-ZXDC CYB5D1 chr17 7764488 ZXDC chr3 126156462 Exonic hg19 NA BE670301 Out-of-frame Inter-chr p13.1 q21.3 Transcription factor 120713 ChimerSeq ChiTaRs ChiTaRs POFUT1-PSEN1 POFUT1 chr20 30823618 PSEN1 chr14 73637655 Exonic hg19 NA AW374421 Out-of-frame Inter-chr q11.21 q24.2 120714 ChimerSeq ChiTaRs ChiTaRs CHD3-PTPRF CHD3 chr17 7804304 PTPRF chr1 44065089 Exonic hg19 NA BF996711 Out-of-frame Inter-chr p13.1 p34.2 120715 ChimerSeq ChiTaRs ChiTaRs DNAJA2-ANKRD11 DNAJA2 chr16 46990865 ANKRD11 chr16 89350791 Exonic hg19 NA BF326211 Out-of-frame Intra-chr q11.2 q24.3 120716 ChimerSeq ChiTaRs ChiTaRs SRP14-EME2 SRP14 chr15 40331323 EME2 chr16 1824946 Exonic hg19 NA CN337981 Out-of-frame Inter-chr q15.1 p13.3 120717 ChimerSeq ChiTaRs ChiTaRs CTIF-SETD6 CTIF chr18 46094713 SETD6 chr16 58553856 Exonic hg19 NA AK127251 Out-of-frame Inter-chr q21 120718 ChimerSeq ChiTaRs ChiTaRs SERPINA1-MOB2 SERPINA1 chr14 94845837 MOB2 chr11 1756030 Exonic hg19 NA BX500961 Out-of-frame Inter-chr q32.13 p15.5 120719 ChimerSeq ChiTaRs ChiTaRs SSH2-BPI SSH2 chr17 27959353 BPI chr20 36955989 Exonic hg19 NA BI025041 Out-of-frame Inter-chr q11.2 q11.23 120720 ChimerSeq ChiTaRs ChiTaRs STX1B-GRIN1 STX1B chr16 31002057 GRIN1 chr9 140040214 Exonic hg19 NA BF954561 Out-of-frame Inter-chr p11.2 q34.3 120721 ChimerSeq ChiTaRs ChiTaRs LOC400643-SLC9B1 LOC400643 chr18 6925664 SLC9B1 chr4 103936016 Exonic hg19 NA AI970491 Out-of-frame Inter-chr q24 120722 ChimerSeq ChiTaRs ChiTaRs ZFP106-SVIL ZFP106 chr15 42706740 SVIL chr10 29880086 Exonic hg19 NA BE003331 Out-of-frame Inter-chr p11.23 120723 ChimerSeq ChiTaRs ChiTaRs SF3B3-LOC100507217 SF3B3 chr16 70566435 LOC100507217 chr15 93440029 Exonic hg19 NA AW890371 Out-of-frame Inter-chr q22.1 120724 ChimerSeq ChiTaRs ChiTaRs PTOV1-PTOV1 PTOV1 chr19 50358401 PTOV1 chr19 50358397 Exonic hg19 NA BF994781 Out-of-frame Intra-chr q13.33 q13.33 120725 ChimerSeq ChiTaRs ChiTaRs MAPK1-CASP1 MAPK1 chr22 22221919 CASP1 chr11 104900491 Exonic hg19 NA AI394721 Out-of-frame Inter-chr q11.22 Oncogene q22.3 120726 ChimerSeq ChiTaRs ChiTaRs PAFAH1B1-PAFAH1B1 PAFAH1B1 chr17 2588909 PAFAH1B1 chr17 2588476 Exonic hg19 NA BM969831 3'UTR-CDS Intra-chr p13.3 Tumor suppressor gene p13.3 Tumor suppressor gene 120727 ChimerSeq ChiTaRs ChiTaRs MYO15B-CDH1 MYO15B chr17 73622034 CDH1 chr16 68857402 Exonic hg19 NA AW361401 Out-of-frame Inter-chr q25.1 q22.1 Oncogene Tumor suppressor gene 120728 ChimerSeq ChiTaRs ChiTaRs ATCAY-ATCAY ATCAY chr19 3927687 ATCAY chr19 3924666 Exonic hg19 NA AX747461 Out-of-frame Intra-chr p13.3 p13.3 120729 ChimerSeq ChiTaRs ChiTaRs SLX4-AUTS2 SLX4 chr16 3631269 AUTS2 chr7 70200951 Exonic hg19 NA DB315791 Out-of-frame Inter-chr p13.3 Tumor suppressor gene q11.22 120730 ChimerSeq ChiTaRs ChiTaRs CHD6-CHD6 CHD6 chr20 40143551 CHD6 chr20 40161911 Exonic hg19 NA DA120241 Out-of-frame Intra-chr q12 q12 120731 ChimerSeq ChiTaRs ChiTaRs ZNF207-ZNF207 ZNF207 chr17 30706515 ZNF207 chr17 30706478 Exonic hg19 NA CN266101 Out-of-frame Intra-chr q11.2 Transcription factor q11.2 Transcription factor 120732 ChimerSeq ChiTaRs ChiTaRs IQSEC3-CCNK IQSEC3 chr12 280652 CCNK chr14 99976347 Exonic hg19 NA BQ343261 Out-of-frame Inter-chr q32.2 120733 ChimerSeq ChiTaRs ChiTaRs PARN-PARN PARN chr16 14687611 PARN chr16 14680135 Exonic hg19 NA AW889901 Out-of-frame Intra-chr 120734 ChimerSeq ChiTaRs ChiTaRs TMEM136-TMEM136 TMEM136 chr11 120203634 TMEM136 chr11 120203659 Exonic hg19 NA CA778381 Out-of-frame Intra-chr q23.3 q23.3 120735 ChimerSeq ChiTaRs ChiTaRs RORA-KLK3 RORA chr15 61372006 KLK3 chr19 51363680 Exonic hg19 NA BF858891 Out-of-frame Inter-chr q22.2 Transcription factor q13.33 120736 ChimerSeq ChiTaRs ChiTaRs N4BP2L2-MORN1 N4BP2L2 chr13 33108103 MORN1 chr1 2294500 Exonic hg19 NA BX110301 Out-of-frame Inter-chr q13.1 p36.32 120737 ChimerSeq ChiTaRs ChiTaRs LOC652276-RGS7 LOC652276 chr16 2653715 RGS7 chr1 241422918 Exonic hg19 NA DR003171 Out-of-frame Inter-chr q43 120738 ChimerSeq ChiTaRs ChiTaRs RALBP1-MIR100HG RALBP1 chr18 9536985 MIR100HG chr11 122138532 Exonic hg19 NA BF996101 Out-of-frame Inter-chr p11.22 q24.1 120739 ChimerSeq ChiTaRs ChiTaRs GNAS-GNAS GNAS chr20 57486090 GNAS chr20 57486072 Exonic hg19 NA BU960781 Out-of-frame Intra-chr q13.32 Oncogene q13.32 Oncogene 120740 ChimerSeq ChiTaRs ChiTaRs INO80-PDE6B INO80 chr15 41291389 PDE6B chr4 664297 Exonic hg19 NA BM725061 Out-of-frame Inter-chr q15.1 p16.3 120741 ChimerSeq ChiTaRs ChiTaRs ANKRD10-ANKRD10 ANKRD10 chr13 111547864 ANKRD10 chr13 111547360 Exonic hg19 NA BF885151 Out-of-frame Intra-chr q34 q34 120742 ChimerSeq ChiTaRs ChiTaRs ATP5S-TNS3 ATP5S chr14 50801290 TNS3 chr7 47314978 Exonic hg19 NA AW840281 Out-of-frame Inter-chr q21.3 p12.3 120743 ChimerSeq ChiTaRs ChiTaRs CECR2-PCLO CECR2 chr22 17908424 PCLO chr7 82763566 Exonic hg19 NA BF946621 Out-of-frame Inter-chr q11.1 q21.11 120744 ChimerSeq ChiTaRs ChiTaRs L3MBTL2-PEG10 L3MBTL2 chr22 41626304 PEG10 chr7 94298765 Exonic hg19 NA AV723591 Out-of-frame Inter-chr q13.2 q21.3 120745 ChimerSeq ChiTaRs ChiTaRs GTF2F1-TCOF1 GTF2F1 chr19 6381843 TCOF1 chr5 149776314 Exonic hg19 NA BF799171 Out-of-frame Inter-chr p13.3 q32 120746 ChimerSeq ChiTaRs ChiTaRs ECH1-ECH1 ECH1 chr19 39307135 ECH1 chr19 39306069 Exonic hg19 NA BF912031 Out-of-frame Intra-chr 120747 ChimerSeq ChiTaRs ChiTaRs COL2A1-CLIC4 COL2A1 chr12 48367016 CLIC4 chr1 25168212 Exonic hg19 NA BF054971 Out-of-frame Inter-chr q13.11 p36.11 120748 ChimerSeq ChiTaRs ChiTaRs SLC17A7-FHIT SLC17A7 chr19 49932736 FHIT chr3 60091684 Exonic hg19 NA BU726961 Out-of-frame Inter-chr q13.33 p14.2 Tumor suppressor gene 120749 ChimerSeq ChiTaRs ChiTaRs NOS1-NFE2L1 NOS1 chr12 117649500 NFE2L1 chr17 46134731 Exonic hg19 NA BF930971 Out-of-frame Inter-chr q24.22 q21.32 Transcription factor 120750 ChimerSeq ChiTaRs ChiTaRs SRCAP-RAD52 SRCAP chr16 30722612 RAD52 chr12 1055190 Exonic hg19 NA BG958211 Out-of-frame Inter-chr p11.2 Transcription factor p13.33 120751 ChimerSeq ChiTaRs ChiTaRs NEMF-WWOX NEMF chr14 50096665 WWOX chr16 78268718 Exonic hg19 NA BX092681 Out-of-frame Inter-chr q21.3 q23.1 Tumor suppressor gene 120752 ChimerSeq ChiTaRs ChiTaRs C1S-CYFIP2 C1S chr12 7170371 CYFIP2 chr5 156755265 Exonic hg19 NA BF126521 Out-of-frame Inter-chr p13.31 q33.3 120753 ChimerSeq ChiTaRs ChiTaRs CBX6-RBFOX1 CBX6 chr22 39260421 RBFOX1 chr16 6541785 Exonic hg19 NA BI016311 Out-of-frame Inter-chr q13.1 p13.3 120754 ChimerSeq ChiTaRs ChiTaRs KLK3-CACNB2 KLK3 chr19 51364020 CACNB2 chr10 18484079 Exonic hg19 NA BF222031 3'UTR-CDS Inter-chr q13.33 p12.33 120755 ChimerSeq ChiTaRs ChiTaRs TRBV20-1-ANAPC16 TRBV20-1 chr16 2011259 ANAPC16 chr10 73830070 Exonic hg19 NA AW899391 Out-of-frame Inter-chr q22.1 120756 ChimerSeq ChiTaRs ChiTaRs RAB37-CUX1 RAB37 chr17 72713251 CUX1 chr7 101804998 Exonic hg19 NA AF461901 Out-of-frame Inter-chr q25.1 q22.1 Tumor suppressor gene Transcription factor 120757 ChimerSeq ChiTaRs ChiTaRs SLC2A10-MSI2 SLC2A10 chr20 45362628 MSI2 chr17 55661699 Exonic hg19 NA AL449901 Out-of-frame Inter-chr q13.12 q22 120758 ChimerSeq ChiTaRs ChiTaRs MYO1D-MSRA MYO1D chr17 31184346 MSRA chr8 10151256 Exonic hg19 NA AA654941 Out-of-frame Inter-chr q11.2 p23.1 120759 ChimerSeq ChiTaRs ChiTaRs NPLOC4-NPLOC4 NPLOC4 chr17 79524254 NPLOC4 chr17 79524021 Exonic hg19 NA R45771 Out-of-frame Intra-chr q25.3 q25.3 120760 ChimerSeq ChiTaRs ChiTaRs NARS-NARS NARS chr18 55268376 NARS chr18 55267898 Exonic hg19 NA BE867051 Out-of-frame Intra-chr q21.31 q21.31 120761 ChimerSeq ChiTaRs ChiTaRs PPM1H-PPM1H PPM1H chr12 63041688 PPM1H chr12 63042214 Exonic hg19 NA AU155021 Out-of-frame Intra-chr q14.2 q14.2 120762 ChimerSeq ChiTaRs ChiTaRs CLPX-CLPX CLPX chr15 65451087 CLPX chr15 65448040 Exonic hg19 NA BI911841 Out-of-frame Intra-chr q22.31 q22.31 120763 ChimerSeq ChiTaRs ChiTaRs SLC5A10-FGG SLC5A10 chr17 18872216 FGG chr4 155530898 Exonic hg19 NA AV657521 Out-of-frame Inter-chr p11.2 q32.1 120764 ChimerSeq ChiTaRs ChiTaRs TMEM208-PLOD1 TMEM208 chr16 67263181 PLOD1 chr1 12026331 Exonic hg19 NA AW263711 Out-of-frame Inter-chr q22.1 p36.22 120765 ChimerSeq ChiTaRs ChiTaRs PCIF1-LMNB1 PCIF1 chr20 44576657 LMNB1 chr5 126171948 Exonic hg19 NA DB324921 Out-of-frame Inter-chr q13.12 q23.2 120766 ChimerSeq ChiTaRs ChiTaRs ATP2A2-ATP2A2 ATP2A2 chr12 110788898 ATP2A2 chr12 110788539 Exonic hg19 NA CB240681 Out-of-frame Intra-chr q24.11 q24.11 120767 ChimerSeq ChiTaRs ChiTaRs RNASEK-C17orf49-TIMMDC1 RNASEK-C17orf49 chr17 6917851 TIMMDC1 chr3 119217412 Exonic hg19 NA CA309751 Out-of-frame Inter-chr p13.1 q13.33 120768 ChimerSeq ChiTaRs ChiTaRs FBXO27-FBXO27 FBXO27 chr19 39515912 FBXO27 chr19 39515764 Exonic hg19 NA BQ225001 Out-of-frame Intra-chr 120769 ChimerSeq ChiTaRs ChiTaRs SAMD10-SAMD10 SAMD10 chr20 62607213 SAMD10 chr20 62606871 Exonic hg19 NA T70951 Out-of-frame Intra-chr q13.33 q13.33 120770 ChimerSeq ChiTaRs ChiTaRs UBAP1L-ZYX UBAP1L chr15 65385544 ZYX chr7 143087463 Exonic hg19 NA AA890191 Out-of-frame Inter-chr q22.31 q34 Tumor suppressor gene 120771 ChimerSeq ChiTaRs ChiTaRs MRC2-CSDA MRC2 chr17 60770479 CSDA chr12 10851996 Exonic hg19 NA AF074691 Out-of-frame Inter-chr q23.2 120772 ChimerSeq ChiTaRs ChiTaRs HSP90B1-HSP90B1 HSP90B1 chr12 104336513 HSP90B1 chr12 104336314 Exonic hg19 NA BQ292081 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene 120773 ChimerSeq ChiTaRs ChiTaRs ATF4-CDV3 ATF4 chr22 39917501 CDV3 chr3 133308388 Exonic hg19 NA BM842661 Out-of-frame Inter-chr q13.1 Transcription factor q22.1 120774 ChimerSeq ChiTaRs ChiTaRs GPATCH8-GPATCH8 GPATCH8 chr17 42473477 GPATCH8 chr17 42472924 Exonic hg19 NA AA505021 Out-of-frame Intra-chr q21.31 q21.31 120775 ChimerSeq ChiTaRs ChiTaRs MARK3-CBFA2T2 MARK3 chr14 103921010 CBFA2T2 chr20 32152318 Exonic hg19 NA AW884581 Out-of-frame Inter-chr q32.32 CAMK:CAMKL q11.21 120776 ChimerSeq ChiTaRs ChiTaRs FBXO34-GATAD2B FBXO34 chr14 55801960 GATAD2B chr1 153893599 Exonic hg19 NA BF380111 Out-of-frame Inter-chr q22.3 Transcription factor 120777 ChimerSeq ChiTaRs ChiTaRs CASC3-EXOSC10 CASC3 chr17 38323637 EXOSC10 chr1 11140175 Exonic hg19 NA AW377331 Out-of-frame Inter-chr q21.1 p36.22 120778 ChimerSeq ChiTaRs ChiTaRs DIAPH3-DIAPH3 DIAPH3 chr13 60240112 DIAPH3 chr13 60240106 Exonic hg19 NA AA947531 Out-of-frame Intra-chr q21.2 q21.2 120779 ChimerSeq ChiTaRs ChiTaRs PCDH17-PCDH17 PCDH17 chr13 58299384 PCDH17 chr13 58299136 Exonic hg19 NA N56191 Out-of-frame Intra-chr q21.1 Tumor suppressor gene q21.1 Tumor suppressor gene 120780 ChimerSeq ChiTaRs ChiTaRs KRT4-KRT4 KRT4 chr12 53200576 KRT4 chr12 53200593 Exonic hg19 NA BF592421 Out-of-frame Intra-chr q13.13 q13.13 120781 ChimerSeq ChiTaRs ChiTaRs TMEM116-SOCS2 TMEM116 chr12 112437928 SOCS2 chr12 93969356 Exonic hg19 NA BF090991 Out-of-frame Intra-chr q24.13 q22 120782 ChimerSeq ChiTaRs ChiTaRs TGM2-DDX17 TGM2 chr20 36757136 DDX17 chr22 38879446 Exonic hg19 NA BM990731 Out-of-frame Inter-chr q11.23 q13.1 120783 ChimerSeq ChiTaRs ChiTaRs PDS5B-CBLB PDS5B chr13 33160763 CBLB chr3 105420947 Exonic hg19 NA DA510891 Out-of-frame Inter-chr q13.1 Tumor suppressor gene q13.11 120784 ChimerSeq ChiTaRs ChiTaRs EWSR1-MED15 EWSR1 chr22 29695746 MED15 chr22 20928982 Exonic hg19 NA BG003281 Out-of-frame Intra-chr q12.2 q11.21 120785 ChimerSeq ChiTaRs ChiTaRs COL1A1-UBE2W COL1A1 chr17 48261755 UBE2W chr8 74754799 Exonic hg19 NA AA598641 Out-of-frame Inter-chr q21.33 Oncogene q21.11 120786 ChimerSeq ChiTaRs ChiTaRs PRPF8-PRPF8 PRPF8 chr17 1580004 PRPF8 chr17 1556884 Exonic hg19 NA AA516391 Out-of-frame Intra-chr 120787 ChimerSeq ChiTaRs ChiTaRs EPN2-EPN2 EPN2 chr17 19186433 EPN2 chr17 19186270 Exonic hg19 NA BM992471 Out-of-frame Intra-chr p11.2 p11.2 120788 ChimerSeq ChiTaRs ChiTaRs CUL4A-CUL4A CUL4A chr13 113918623 CUL4A chr13 113918587 Exonic hg19 NA AA995801 Out-of-frame Intra-chr q34 q34 120789 ChimerSeq ChiTaRs ChiTaRs PCF11-ANK2 PCF11 chr11 82869544 ANK2 chr4 114201791 Exonic hg19 NA BF963381 Out-of-frame Inter-chr q14.1 q25 120790 ChimerSeq ChiTaRs ChiTaRs LNX2-BNIP1 LNX2 chr13 28127559 BNIP1 chr5 172577227 Exonic hg19 NA AK172771 Out-of-frame Inter-chr q12.2 q35.1 120791 ChimerSeq ChiTaRs ChiTaRs SRXN1-SRXN1 SRXN1 chr20 627566 SRXN1 chr20 627554 Exonic hg19 NA BU608361 Out-of-frame Intra-chr p13 p13 120792 ChimerSeq ChiTaRs ChiTaRs ZFR2-DDX17 ZFR2 chr19 3860155 DDX17 chr22 38884280 Exonic hg19 NA BF820271 Out-of-frame Inter-chr p13.3 q13.1 120793 ChimerSeq ChiTaRs ChiTaRs RBP5-ENOX1 RBP5 chr12 7281493 ENOX1 chr13 44021002 Exonic hg19 NA BF871061 Out-of-frame Inter-chr p13.31 q14.11 120794 ChimerSeq ChiTaRs ChiTaRs ATF7IP-ASAP3 ATF7IP chr12 14613863 ASAP3 chr1 23761234 Exonic hg19 NA AA358761 Out-of-frame Inter-chr p13.1 120795 ChimerSeq ChiTaRs ChiTaRs THOC1-SRP19 THOC1 chr18 253958 SRP19 chr5 112203190 Exonic hg19 NA AK130591 Out-of-frame Inter-chr p11.32 q22.2 120796 ChimerSeq ChiTaRs ChiTaRs INPPL1-INPPL1 INPPL1 chr11 71944542 INPPL1 chr11 71944753 Exonic hg19 NA BE765401 Out-of-frame Intra-chr q13.4 q13.4 120797 ChimerSeq ChiTaRs ChiTaRs ATG2B-APPL2 ATG2B chr14 96747769 APPL2 chr12 105594371 Exonic hg19 NA AA705711 Out-of-frame Inter-chr q32.2 q23.3 120798 ChimerSeq ChiTaRs ChiTaRs ERN1-TBXA2R ERN1 chr17 62150309 TBXA2R chr19 3594777 Exonic hg19 NA D38081 Out-of-frame Inter-chr q23.3 p13.3 120799 ChimerSeq ChiTaRs ChiTaRs AFG3L1P-AFG3L1P AFG3L1P chr16 90061837 AFG3L1P chr16 90061213 Exonic hg19 NA BG036321 Out-of-frame Intra-chr q24.3 q24.3 120800 ChimerSeq ChiTaRs ChiTaRs VAT1-MAVS VAT1 chr17 41166820 MAVS chr20 3848690 Exonic hg19 NA H83411 Out-of-frame Inter-chr q21.31 p13 120801 ChimerSeq ChiTaRs ChiTaRs A2M-A2M A2M chr12 9230419 A2M chr12 9230399 Exonic hg19 NA AA804941 Out-of-frame Intra-chr p13.31 p13.31 120802 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65267299 MALAT1 chr11 65267552 Exonic hg19 NA EY123349 Out-of-frame Intra-chr q13.1 q13.1 120803 ChimerSeq ChiTaRs ChiTaRs DNM2-MDFI DNM2 chr19 10940944 MDFI chr6 41617404 Exonic hg19 NA BQ344631 Out-of-frame Inter-chr p13.2 p21.1 120804 ChimerSeq ChiTaRs ChiTaRs NOL3-MICAL2 NOL3 chr16 67209640 MICAL2 chr11 12284593 Exonic hg19 NA AW015911 Out-of-frame Inter-chr q22.1 p15.3 120805 ChimerSeq ChiTaRs ChiTaRs ST8SIA1-ST8SIA1 ST8SIA1 chr12 22440151 ST8SIA1 chr12 22401938 Exonic hg19 NA AA169311 Out-of-frame Intra-chr p12.1 p12.1 120806 ChimerSeq ChiTaRs ChiTaRs ERBB3-TRIM37 ERBB3 chr12 56495768 TRIM37 chr17 57075913 Exonic hg19 NA DN914711 Out-of-frame Inter-chr q13.2 Oncogene q22 120807 ChimerSeq ChiTaRs ChiTaRs TCF3-TCF3 TCF3 chr19 1610346 TCF3 chr19 1610417 Exonic hg19 NA CN419071 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p13.3 Oncogene Tumor suppressor gene Transcription factor 120808 ChimerSeq ChiTaRs ChiTaRs ECH1-ECH1 ECH1 chr19 39307135 ECH1 chr19 39306076 Exonic hg19 NA BF911961 Out-of-frame Intra-chr 120809 ChimerSeq ChiTaRs ChiTaRs FXYD6-FXYD2-FXYD6-FXYD2 FXYD6-FXYD2 chr11 117707778 FXYD6-FXYD2 chr11 117707921 Exonic hg19 NA N95601 Out-of-frame Intra-chr q23.3 q23.3 120810 ChimerSeq ChiTaRs ChiTaRs BMP7-PLD6 BMP7 chr20 55746161 PLD6 chr17 17134619 Exonic hg19 NA BI053091 Out-of-frame Inter-chr q13.31 p11.2 120811 ChimerSeq ChiTaRs ChiTaRs C16orf45-MAGEF1 C16orf45 chr16 15554368 MAGEF1 chr3 184428298 Exonic hg19 NA BF874511 Out-of-frame Inter-chr q27.1 120812 ChimerSeq ChiTaRs ChiTaRs C17orf67-C17orf67 C17orf67 chr17 54908762 C17orf67 chr17 54908763 Exonic hg19 NA AK130821 Out-of-frame Intra-chr q22 q22 120813 ChimerSeq ChiTaRs ChiTaRs CLEC16A-MFSD2A CLEC16A chr16 11147184 MFSD2A chr1 40423375 Exonic hg19 NA AI914591 Out-of-frame Inter-chr p13.13 p34.2 Tumor suppressor gene 120814 ChimerSeq ChiTaRs ChiTaRs ZBTB16-PAXIP1 ZBTB16 chr11 113977549 PAXIP1 chr7 154767916 Exonic hg19 NA BG012561 Out-of-frame Inter-chr q23.2 Tumor suppressor gene Transcription factor q36.2 120815 ChimerSeq ChiTaRs ChiTaRs METTL23-METTL23 METTL23 chr17 74729962 METTL23 chr17 74729420 Exonic hg19 NA BU689941 5'UTR-CDS Intra-chr q25.1 q25.1 120816 ChimerSeq ChiTaRs ChiTaRs AES-ABL1 AES chr19 3053266 ABL1 chr9 133730187 Exonic hg19 NA AI571821 5'UTR-CDS Inter-chr p13.3 q34.12 TK:Abl Oncogene 120817 ChimerSeq ChiTaRs ChiTaRs TGIF2-TGIF2 TGIF2 chr20 35221923 TGIF2 chr20 35221913 Exonic hg19 NA BM129681 Out-of-frame Intra-chr q11.23 Transcription factor q11.23 Transcription factor 120818 ChimerSeq ChiTaRs ChiTaRs NEIL1-NEIL1 NEIL1 chr15 75646705 NEIL1 chr15 75647030 Exonic hg19 NA AW860251 Out-of-frame Intra-chr q24.2 q24.2 120819 ChimerSeq ChiTaRs ChiTaRs KLK2-KLK2 KLK2 chr19 51378714 KLK2 chr19 51379342 Exonic hg19 NA BI047271 Out-of-frame Intra-chr q13.33 q13.33 120820 ChimerSeq ChiTaRs ChiTaRs ATXN1L-GPC4 ATXN1L chr16 71893823 GPC4 chrX 132532910 Exonic hg19 NA AW195421 Out-of-frame Inter-chr q22.2 q26.2 120821 ChimerSeq ChiTaRs ChiTaRs NEMF-NEMF NEMF chr14 50088773 NEMF chr14 50088780 Exonic hg19 NA W56211 Out-of-frame Intra-chr q21.3 q21.3 120822 ChimerSeq ChiTaRs ChiTaRs KIAA0430-ASAP1 KIAA0430 chr16 15688521 ASAP1 chr8 131261733 Exonic hg19 NA BI026371 Out-of-frame Inter-chr q24.22 120823 ChimerSeq ChiTaRs ChiTaRs NEAT1-NEAT1 NEAT1 chr11 65203808 NEAT1 chr11 65203474 Exonic hg19 NA BF852721 Out-of-frame Intra-chr q13.1 q13.1 120824 ChimerSeq ChiTaRs ChiTaRs CHURC1-MFSD12 CHURC1 chr14 65406444 MFSD12 chr19 3556625 Exonic hg19 NA BG951551 Out-of-frame Inter-chr q23.3 p13.3 120825 ChimerSeq ChiTaRs ChiTaRs CLMN-CLMN CLMN chr14 95711131 CLMN chr14 95710725 Exonic hg19 NA BG010371 Out-of-frame Intra-chr q32.13 q32.13 120826 ChimerSeq ChiTaRs ChiTaRs MRO-RORA MRO chr18 48321967 RORA chr15 61473945 Exonic hg19 NA BF091671 Out-of-frame Inter-chr q21.2 q22.2 Transcription factor 120827 ChimerSeq ChiTaRs ChiTaRs LSM14A-LSM14A LSM14A chr19 34719912 LSM14A chr19 34719872 Exonic hg19 NA BI870881 Out-of-frame Intra-chr 120828 ChimerSeq ChiTaRs ChiTaRs CKB-LSM14B CKB chr14 103988480 LSM14B chr20 60701377 Exonic hg19 NA AW847911 Out-of-frame Inter-chr q32.33 q13.33 120829 ChimerSeq ChiTaRs ChiTaRs KIAA1671-KIAA1671 KIAA1671 chr22 25520301 KIAA1671 chr22 25519975 Exonic hg19 NA CV325121 Out-of-frame Intra-chr q11.23 q11.23 120830 ChimerSeq ChiTaRs ChiTaRs TJP1-TJP1 TJP1 chr15 30058723 TJP1 chr15 30058699 Exonic hg19 NA BI060381 Out-of-frame Intra-chr 120831 ChimerSeq ChiTaRs ChiTaRs MYH10-ARHGEF10L MYH10 chr17 8377725 ARHGEF10L chr1 18020872 Exonic hg19 NA T17401 Out-of-frame Inter-chr p13.1 p36.13 120832 ChimerSeq ChiTaRs ChiTaRs PRKAR1A-PRKAR1A PRKAR1A chr17 66527977 PRKAR1A chr17 66527926 Exonic hg19 NA AA508561 Out-of-frame Intra-chr q24.2 Oncogene Tumor suppressor gene q24.2 Oncogene Tumor suppressor gene 120833 ChimerSeq ChiTaRs ChiTaRs SUV420H1-SUV420H1 SUV420H1 chr11 67934455 SUV420H1 chr11 67941305 Exonic hg19 NA BP306281 Out-of-frame Intra-chr 120834 ChimerSeq ChiTaRs ChiTaRs TRIP10-ANXA2 TRIP10 chr19 6746573 ANXA2 chr9 33624940 Exonic hg19 NA BQ427761 Out-of-frame Inter-chr p13.3 q22.2 120835 ChimerSeq ChiTaRs ChiTaRs TBC1D20-RAB7L1 TBC1D20 chr20 417497 RAB7L1 chr1 205737958 Exonic hg19 NA BU616751 Out-of-frame Inter-chr p13 120836 ChimerSeq ChiTaRs ChiTaRs CYB5B-CIRH1A CYB5B chr16 69458760 CIRH1A chr16 69202722 Exonic hg19 NA BI861901 Out-of-frame Intra-chr q22.1 120837 ChimerSeq ChiTaRs ChiTaRs C3-OXR1 C3 chr19 6677902 OXR1 chr8 107452195 Exonic hg19 NA AA056091 Out-of-frame Inter-chr p13.3 q23.1 120838 ChimerSeq ChiTaRs ChiTaRs SNTB2-RBM45 SNTB2 chr16 69339440 RBM45 chr2 178988364 Exonic hg19 NA DN913481 Out-of-frame Inter-chr q31.2 120839 ChimerSeq ChiTaRs ChiTaRs MKL1-CD9 MKL1 chr22 40948372 CD9 chr12 6314658 Exonic hg19 NA BF770241 Out-of-frame Inter-chr q13.2 p13.31 120840 ChimerSeq ChiTaRs ChiTaRs LOC100505549-LOC100505549 LOC100505549 chr18 55313845 LOC100505549 chr18 55313799 Exonic hg19 NA BU676141 Out-of-frame Intra-chr 120841 ChimerSeq ChiTaRs ChiTaRs MALAT1-HDAC3 MALAT1 chr11 65268892 HDAC3 chr5 141005791 Exonic hg19 NA AI133081 Out-of-frame Inter-chr q13.1 q31.3 Tumor suppressor gene 120842 ChimerSeq ChiTaRs ChiTaRs TGM2-TGM2 TGM2 chr20 36793672 TGM2 chr20 36784396 Exonic hg19 NA BP287181 Out-of-frame Intra-chr q11.23 q11.23 120843 ChimerSeq ChiTaRs ChiTaRs PRPF40B-DAZAP1 PRPF40B chr12 50038012 DAZAP1 chr19 1422851 Exonic hg19 NA BF932401 Out-of-frame Inter-chr q13.12 p13.3 120844 ChimerSeq ChiTaRs ChiTaRs TUBD1-SEC31B TUBD1 chr17 57963025 SEC31B chr10 102286303 Exonic hg19 NA CB123711 Out-of-frame Inter-chr q23.1 q24.31 120845 ChimerSeq ChiTaRs ChiTaRs PLA2G6-MAP4 PLA2G6 chr22 38524110 MAP4 chr3 47917174 Exonic hg19 NA BQ300191 Out-of-frame Inter-chr q13.1 p21.31 120846 ChimerSeq ChiTaRs ChiTaRs DOPEY2-DOPEY2 DOPEY2 chr21 37633030 DOPEY2 chr21 37563411 Exonic hg19 NA R82141 Out-of-frame Intra-chr q22.12 q22.12 120847 ChimerSeq ChiTaRs ChiTaRs TADA2A-NECAB3 TADA2A chr17 35801828 NECAB3 chr20 32245631 Exonic hg19 NA BG984251 Out-of-frame Inter-chr q12 q11.22 120848 ChimerSeq ChiTaRs ChiTaRs AP3D1-COL19A1 AP3D1 chr19 2114277 COL19A1 chr6 70733978 Exonic hg19 NA AI560431 Out-of-frame Inter-chr p13.3 q13 120849 ChimerSeq ChiTaRs ChiTaRs NDUFB7-ALDH1B1 NDUFB7 chr19 14677064 ALDH1B1 chr9 38396300 Exonic hg19 NA BE856261 Out-of-frame Inter-chr p13.12 p13.1 120850 ChimerSeq ChiTaRs ChiTaRs C3-MT1G C3 chr19 6684814 MT1G chr16 56700964 Exonic hg19 NA AF074681 Out-of-frame Inter-chr p13.3 q13 Tumor suppressor gene 120851 ChimerSeq ChiTaRs ChiTaRs RHOJ-YIPF5 RHOJ chr14 63735873 YIPF5 chr5 143543690 Exonic hg19 NA DA570211 Out-of-frame Inter-chr q23.2 q31.3 120852 ChimerSeq ChiTaRs ChiTaRs FOS-SPTBN1 FOS chr14 75746437 SPTBN1 chr2 54891170 Exonic hg19 NA BI045531 Out-of-frame Inter-chr q24.3 Transcription factor p16.2 Tumor suppressor gene 120853 ChimerSeq ChiTaRs ChiTaRs ETV6-C19orf66 ETV6 chr12 11965400 C19orf66 chr19 10202263 Exonic hg19 NA BF822591 Out-of-frame Inter-chr p13.2 Tumor suppressor gene Transcription factor p13.2 120854 ChimerSeq ChiTaRs ChiTaRs APOC4-DLG3 APOC4 chr19 45452048 DLG3 chrX 69723377 Exonic hg19 NA AA345841 Out-of-frame Inter-chr q13.32 q13.1 120855 ChimerSeq ChiTaRs ChiTaRs EVPL-MISP EVPL chr17 74011039 MISP chr19 757696 Exonic hg19 NA BF852691 Out-of-frame Inter-chr q25.1 p13.3 120856 ChimerSeq ChiTaRs ChiTaRs CENPV-ATXN7 CENPV chr17 16251196 ATXN7 chr3 63968645 Exonic hg19 NA BF511861 Out-of-frame Inter-chr p11.2 p14.1 120857 ChimerSeq ChiTaRs ChiTaRs TAGLN-ANKHD1-EIF4EBP3 TAGLN chr11 117075317 ANKHD1-EIF4EBP3 chr5 139921798 Exonic hg19 NA AW998111 Out-of-frame Inter-chr q23.3 Tumor suppressor gene q31.3 120858 ChimerSeq ChiTaRs ChiTaRs LASP1-LASP1 LASP1 chr17 37077900 LASP1 chr17 37077901 Exonic hg19 NA AA659591 Out-of-frame Intra-chr q12 q12 120859 ChimerSeq ChiTaRs ChiTaRs FOPNL-SLC12A2 FOPNL chr16 15982460 SLC12A2 chr5 127514257 Exonic hg19 NA BG529061 Out-of-frame Inter-chr p13.11 q23.3 120860 ChimerSeq ChiTaRs ChiTaRs HEATR3-HEATR3 HEATR3 chr16 50107435 HEATR3 chr16 50107387 Exonic hg19 NA BF328501 Out-of-frame Intra-chr q12.1 q12.1 120861 ChimerSeq ChiTaRs ChiTaRs AKAP13-USP47 AKAP13 chr15 85945012 USP47 chr11 11964382 Exonic hg19 NA BF368021 Out-of-frame Inter-chr q25.3 p15.3 120862 ChimerSeq ChiTaRs ChiTaRs PPDPF-HNRNPD PPDPF chr20 62153103 HNRNPD chr4 83278003 Exonic hg19 NA BF805251 Out-of-frame Inter-chr q13.33 q21.22 120863 ChimerSeq ChiTaRs ChiTaRs EZH1-STAT3 EZH1 chr17 40882937 STAT3 chr17 40482717 Exonic hg19 NA BU658881 Out-of-frame Intra-chr q21.2 Tumor suppressor gene q21.2 Oncogene Tumor suppressor gene Transcription factor 120864 ChimerSeq ChiTaRs ChiTaRs TUBA1B-PFKM TUBA1B chr12 49525178 PFKM chr12 48531503 Exonic hg19 NA DA077791 5'UTR-CDS Intra-chr q13.12 q13.11 120865 ChimerSeq ChiTaRs ChiTaRs SRPR-SRPR SRPR chr11 126134178 SRPR chr11 126134269 Exonic hg19 NA BE166221 Out-of-frame Intra-chr 120866 ChimerSeq ChiTaRs ChiTaRs ISG20-TBCC ISG20 chr15 89182642 TBCC chr6 42713447 Exonic hg19 NA BQ052721 Out-of-frame Inter-chr q26.1 p21.1 120867 ChimerSeq ChiTaRs ChiTaRs C17orf67-ITFG1 C17orf67 chr17 54909009 ITFG1 chr16 47294519 Exonic hg19 NA BF855391 Out-of-frame Inter-chr q22 q12.1 120868 ChimerSeq ChiTaRs ChiTaRs SRRM2-SRRM2 SRRM2 chr16 2819227 SRRM2 chr16 2806464 Exonic hg19 NA BG470971 Out-of-frame Intra-chr p13.3 p13.3 120869 ChimerSeq ChiTaRs ChiTaRs KRT23-KIRREL KRT23 chr17 39084773 KIRREL chr1 157963125 Exonic hg19 NA CV349321 Out-of-frame Inter-chr q23.1 120870 ChimerSeq ChiTaRs ChiTaRs PSMC3IP-PSMC3IP PSMC3IP chr17 40729320 PSMC3IP chr17 40729074 Exonic hg19 NA T27161 5'UTR-5'UTR Intra-chr q21.2 q21.2 120871 ChimerSeq ChiTaRs ChiTaRs ZNF521-RGS5 ZNF521 chr18 22825831 RGS5 chr1 163174292 Exonic hg19 NA AA659201 Out-of-frame Inter-chr q11.2 Oncogene Transcription factor q23.3 120872 ChimerSeq ChiTaRs ChiTaRs BSG-BSG BSG chr19 580660 BSG chr19 580655 Exonic hg19 NA BG491011 Out-of-frame Intra-chr p13.3 p13.3 120873 ChimerSeq ChiTaRs ChiTaRs DNAJB1-TTC40 DNAJB1 chr19 14640120 TTC40 chr10 134726568 Exonic hg19 NA DB237011 Out-of-frame Inter-chr p13.12 Tumor suppressor gene 120874 ChimerSeq ChiTaRs ChiTaRs PLD3-PLD3 PLD3 chr19 40882543 PLD3 chr19 40882531 Exonic hg19 NA AL041531 Out-of-frame Intra-chr q13.2 q13.2 120875 ChimerSeq ChiTaRs ChiTaRs BICD1-SPAST BICD1 chr12 32377163 SPAST chr2 32354343 Exonic hg19 NA T06451 Out-of-frame Inter-chr p11.21 p22.3 120876 ChimerSeq ChiTaRs ChiTaRs RCOR1-LMNA RCOR1 chr14 103119701 LMNA chr1 156097436 Exonic hg19 NA AW818381 Out-of-frame Inter-chr q32.31 q22 120877 ChimerSeq ChiTaRs ChiTaRs PRPSAP2-LFNG PRPSAP2 chr17 18768839 LFNG chr7 2565187 Exonic hg19 NA BF373191 Out-of-frame Inter-chr p11.2 p22.3 120878 ChimerSeq ChiTaRs ChiTaRs RPL13-MAPKAPK3 RPL13 chr16 89629486 MAPKAPK3 chr3 50677805 Exonic hg19 NA AA524181 Out-of-frame Inter-chr q24.3 p21.2 CAMK:MAPKAPK 120879 ChimerSeq ChiTaRs ChiTaRs RNF26-RNF26 RNF26 chr11 119207154 RNF26 chr11 119206249 Exonic hg19 NA BU844691 Out-of-frame Intra-chr q23.3 q23.3 120880 ChimerSeq ChiTaRs ChiTaRs CACNA1C-LOC284889 CACNA1C chr12 2257157 LOC284889 chr22 24237354 Exonic hg19 NA H40611 Out-of-frame Inter-chr p13.33 120881 ChimerSeq ChiTaRs ChiTaRs ADRBK1-ADRBK1 ADRBK1 chr11 67053825 ADRBK1 chr11 67049318 Exonic hg19 NA BF803081 Out-of-frame Intra-chr 120882 ChimerSeq ChiTaRs ChiTaRs DAPK3-NFATC1 DAPK3 chr19 3964370 NFATC1 chr18 77271940 Exonic hg19 NA BI045301 Out-of-frame Inter-chr p13.3 CAMK:DAPK Tumor suppressor gene q23 Transcription factor 120883 ChimerSeq ChiTaRs ChiTaRs BOLA2-RNF144A BOLA2 chr16 30094328 RNF144A chr2 7183952 Exonic hg19 NA BF873321 Out-of-frame Inter-chr p11.2 p25.1 Tumor suppressor gene 120884 ChimerSeq ChiTaRs ChiTaRs KRT5-UBE2L3 KRT5 chr12 52908423 UBE2L3 chr22 21976957 Exonic hg19 NA BM552241 Out-of-frame Inter-chr q13.13 q11.21 120885 ChimerSeq ChiTaRs ChiTaRs RPAIN-MALAT1 RPAIN chr17 5336187 MALAT1 chr11 65268480 Exonic hg19 NA AV723471 Out-of-frame Inter-chr p13.2 q13.1 120886 ChimerSeq ChiTaRs ChiTaRs CALR-CALR CALR chr19 13050926 CALR chr19 13050929 Exonic hg19 NA BQ304201 Out-of-frame Intra-chr p13.13 p13.13 120887 ChimerSeq ChiTaRs ChiTaRs GRAMD1B-FAM5C GRAMD1B chr11 123431777 FAM5C chr1 190414666 Exonic hg19 NA CV403191 Out-of-frame Inter-chr q24.1 120888 ChimerSeq ChiTaRs ChiTaRs ALDH3A2-SMC1A ALDH3A2 chr17 19559029 SMC1A chrX 53438739 Exonic hg19 NA BF845221 Out-of-frame Inter-chr p11.2 p11.22 120889 ChimerSeq ChiTaRs ChiTaRs CBX5-TFE3 CBX5 chr12 54626018 TFE3 chrX 48887159 Exonic hg19 NA BE167921 Out-of-frame Inter-chr q13.13 Tumor suppressor gene p11.23 Oncogene Transcription factor 120890 ChimerSeq ChiTaRs ChiTaRs WBP2-FTL WBP2 chr17 73842364 FTL chr19 49469995 Exonic hg19 NA DR979251 Out-of-frame Inter-chr q25.1 q13.33 120891 ChimerSeq ChiTaRs ChiTaRs STAU1-CALM1 STAU1 chr20 47730461 CALM1 chr14 90871149 Exonic hg19 NA CB164141 Out-of-frame Inter-chr q13.13 q32.11 120892 ChimerSeq ChiTaRs ChiTaRs AP2B1-AP2B1 AP2B1 chr17 34052618 AP2B1 chr17 34001207 Exonic hg19 NA BP279701 Out-of-frame Intra-chr q12 q12 120893 ChimerSeq ChiTaRs ChiTaRs UACA-IARS UACA chr15 70947647 IARS chr9 95020834 Exonic hg19 NA AI685341 Out-of-frame Inter-chr q23 q22.31 120894 ChimerSeq ChiTaRs ChiTaRs AMOTL1-PPIF AMOTL1 chr11 94533340 PPIF chr10 81109423 Exonic hg19 NA BF738681 Out-of-frame Inter-chr q21 q22.3 120895 ChimerSeq ChiTaRs ChiTaRs DSCAM-TMOD1 DSCAM chr21 41956049 TMOD1 chr9 100363746 Exonic hg19 NA T80351 Out-of-frame Inter-chr q22.2 q22.33 120896 ChimerSeq ChiTaRs ChiTaRs SARNP-C7orf73 SARNP chr12 56211285 C7orf73 chr7 135358956 Exonic hg19 NA BE843441 Out-of-frame Inter-chr q13.2 q33 120897 ChimerSeq ChiTaRs ChiTaRs ENOSF1-TRIM54 ENOSF1 chr18 709245 TRIM54 chr2 27522156 Exonic hg19 NA BF371811 Out-of-frame Inter-chr p11.32 p23.3 120898 ChimerSeq ChiTaRs ChiTaRs BCL2L13-BCL2L13 BCL2L13 chr22 18210747 BCL2L13 chr22 18189551 Exonic hg19 NA AF183411 Out-of-frame Intra-chr q11.21 q11.21 120899 ChimerSeq ChiTaRs ChiTaRs SLC5A2-SLC5A2 SLC5A2 chr16 31501070 SLC5A2 chr16 31500810 Exonic hg19 NA BG913471 Out-of-frame Intra-chr p11.2 p11.2 120900 ChimerSeq ChiTaRs ChiTaRs SNRNP70-SYNPO2 SNRNP70 chr19 49608716 SYNPO2 chr4 119972609 Exonic hg19 NA BQ376271 Out-of-frame Inter-chr q13.33 q26 Tumor suppressor gene 120901 ChimerSeq ChiTaRs ChiTaRs PLEKHH1-CASKIN1 PLEKHH1 chr14 68055822 CASKIN1 chr16 2242866 Exonic hg19 NA BF373101 Out-of-frame Inter-chr q24.1 p13.3 120902 ChimerSeq ChiTaRs ChiTaRs FAU-PLIN3 FAU chr11 64888496 PLIN3 chr19 4838947 Exonic hg19 NA AJ712941 Out-of-frame Inter-chr q13.1 p13.3 120903 ChimerSeq ChiTaRs ChiTaRs COX4I1-TOMM22 COX4I1 chr16 85840606 TOMM22 chr22 39078006 Exonic hg19 NA AA740171 Out-of-frame Inter-chr q24.1 q13.1 120904 ChimerSeq ChiTaRs ChiTaRs SIPA1L1-E2F4 SIPA1L1 chr14 72009105 E2F4 chr16 67229798 Exonic hg19 NA AW754491 Out-of-frame Inter-chr q24.2 q22.1 Transcription factor 120905 ChimerSeq ChiTaRs ChiTaRs MYH11-SDC3 MYH11 chr16 15950885 SDC3 chr1 31343631 Exonic hg19 NA DB262991 Out-of-frame Inter-chr Oncogene p35.2 120906 ChimerSeq ChiTaRs ChiTaRs SIN3B-SIN3B SIN3B chr19 16980652 SIN3B chr19 16980299 Exonic hg19 NA BQ308641 Out-of-frame Intra-chr p13.11 p13.11 120907 ChimerSeq ChiTaRs ChiTaRs MAPK1-CLIP2 MAPK1 chr22 22171458 CLIP2 chr7 73800849 Exonic hg19 NA DA989331 Out-of-frame Inter-chr q11.22 Oncogene q11.23 120908 ChimerSeq ChiTaRs ChiTaRs ENTPD6-ENTPD6 ENTPD6 chr20 25207300 ENTPD6 chr20 25206929 Exonic hg19 NA AA578001 Out-of-frame Intra-chr p11.21 p11.21 120909 ChimerSeq ChiTaRs ChiTaRs KIAA0355-KIAA0355 KIAA0355 chr19 34846469 KIAA0355 chr19 34846038 Exonic hg19 NA BU689631 Out-of-frame Intra-chr 120910 ChimerSeq ChiTaRs ChiTaRs TMBIM6-TMBIM6 TMBIM6 chr12 50157812 TMBIM6 chr12 50157694 Exonic hg19 NA AW361121 Out-of-frame Intra-chr q13.12 q13.12 120911 ChimerSeq ChiTaRs ChiTaRs UNKL-PANX2 UNKL chr16 1427890 PANX2 chr22 50617619 Exonic hg19 NA CR747171 Out-of-frame Inter-chr p13.3 q13.33 Tumor suppressor gene 120912 ChimerSeq ChiTaRs ChiTaRs NOP2-TCF3 NOP2 chr12 6669265 TCF3 chr19 1621070 Exonic hg19 NA EU159435 Out-of-frame Inter-chr p13.31 p13.3 Oncogene Tumor suppressor gene Transcription factor KB Pub 120913 ChimerSeq ChiTaRs ChiTaRs VASH1-UGGT1 VASH1 chr14 77249339 UGGT1 chr2 128950162 Exonic hg19 NA BI041241 Out-of-frame Inter-chr q24.3 q14.3 120914 ChimerSeq ChiTaRs ChiTaRs TMBIM6-RPS6KA1 TMBIM6 chr12 50152178 RPS6KA1 chr1 26894691 Exonic hg19 NA DA446811 Out-of-frame Inter-chr q13.12 120915 ChimerSeq ChiTaRs ChiTaRs MALAT1-HDAC3 MALAT1 chr11 65268892 HDAC3 chr5 141000448 Exonic hg19 NA AF130111 Out-of-frame Inter-chr q13.1 q31.3 Tumor suppressor gene 120916 ChimerSeq ChiTaRs ChiTaRs INPPL1-NPM1 INPPL1 chr11 71949358 NPM1 chr5 170814870 Exonic hg19 NA BC071891 Out-of-frame Inter-chr q13.4 q35.1 Oncogene Tumor suppressor gene 120917 ChimerSeq ChiTaRs ChiTaRs LGI4-MYH10 LGI4 chr19 35625802 MYH10 chr17 8408015 Exonic hg19 NA BG954171 Out-of-frame Inter-chr q13.12 p13.1 120918 ChimerSeq ChiTaRs ChiTaRs YWHAB-YWHAB YWHAB chr20 43535161 YWHAB chr20 43533671 Exonic hg19 NA CB242961 Out-of-frame Intra-chr q13.12 q13.12 120919 ChimerSeq ChiTaRs ChiTaRs CDH3-ZNF608 CDH3 chr16 68687051 ZNF608 chr5 123982907 Exonic hg19 NA BF354821 Out-of-frame Inter-chr q22.1 q23.2 Transcription factor 120920 ChimerSeq ChiTaRs ChiTaRs PDE3A-VGLL4 PDE3A chr12 20709645 VGLL4 chr3 11606340 Exonic hg19 NA DA711191 Out-of-frame Inter-chr p12.2 p25.2 120921 ChimerSeq ChiTaRs ChiTaRs SCAF4-SCAF4 SCAF4 chr21 33067216 SCAF4 chr21 33067231 Exonic hg19 NA BQ307991 Out-of-frame Intra-chr q22.11 q22.11 120922 ChimerSeq ChiTaRs ChiTaRs MPND-GUSBP10 MPND chr19 4360057 GUSBP10 chr7 57236005 Exonic hg19 NA AW383341 Out-of-frame Inter-chr p13.3 p11.2 120923 ChimerSeq ChiTaRs ChiTaRs RRP1-RRP1 RRP1 chr21 45222525 RRP1 chr21 45213293 Exonic hg19 NA AA421801 Out-of-frame Intra-chr q22.3 q22.3 120924 ChimerSeq ChiTaRs ChiTaRs SNRNP70-HDAC10 SNRNP70 chr19 49610611 HDAC10 chr22 50684217 Exonic hg19 NA AA425581 Out-of-frame Inter-chr q13.33 q13.33 120925 ChimerSeq ChiTaRs ChiTaRs IPO5-IPO5 IPO5 chr13 98628964 IPO5 chr13 98660340 Exonic hg19 NA BF435791 Out-of-frame Intra-chr q32.2 q32.2 120926 ChimerSeq ChiTaRs ChiTaRs GATAD2A-GATAD2A GATAD2A chr19 19609389 GATAD2A chr19 19598919 Exonic hg19 NA AA601301 Out-of-frame Intra-chr p13.11 Transcription factor p13.11 Transcription factor 120927 ChimerSeq ChiTaRs ChiTaRs C16orf72-C16orf72 C16orf72 chr16 9210690 C16orf72 chr16 9197090 Exonic hg19 NA BE082041 Out-of-frame Intra-chr p13.2 p13.2 120928 ChimerSeq ChiTaRs ChiTaRs GATAD2A-GATAD2A GATAD2A chr19 19579223 GATAD2A chr19 19578601 Exonic hg19 NA CV312441 Out-of-frame Intra-chr p13.11 Transcription factor p13.11 Transcription factor 120929 ChimerSeq ChiTaRs ChiTaRs PKNOX2-C2orf43 PKNOX2 chr11 125037120 C2orf43 chr2 20885016 Exonic hg19 NA BF590211 Out-of-frame Inter-chr q24.2 Transcription factor 120930 ChimerSeq ChiTaRs ChiTaRs EGLN2-SHOC2 EGLN2 chr19 41306897 SHOC2 chr10 112679360 Exonic hg19 NA BU537611 Out-of-frame Inter-chr q13.2 q25.2 120931 ChimerSeq ChiTaRs ChiTaRs REXO2-SARM1 REXO2 chr11 114320997 SARM1 chr17 26714397 Exonic hg19 NA AW972641 Out-of-frame Inter-chr q23.2 q11.2 120932 ChimerSeq ChiTaRs ChiTaRs ABCC3-ABCC3 ABCC3 chr17 48769460 ABCC3 chr17 48765523 Exonic hg19 NA AK000791 Out-of-frame Intra-chr q21.33 q21.33 120933 ChimerSeq ChiTaRs ChiTaRs ZDHHC8P1-TMEM130 ZDHHC8P1 chr22 23733505 TMEM130 chr7 98449676 Exonic hg19 NA CN422271 Out-of-frame Inter-chr q11.23 q22.1 120934 ChimerSeq ChiTaRs ChiTaRs JAG1-JAG1 JAG1 chr20 10620068 JAG1 chr20 10620451 Exonic hg19 NA AW361171 Out-of-frame Intra-chr p12.2 p12.2 120935 ChimerSeq ChiTaRs ChiTaRs BPTF-BPTF BPTF chr17 65862663 BPTF chr17 65862670 Exonic hg19 NA BF988361 Out-of-frame Intra-chr q24.2 Transcription factor q24.2 Transcription factor 120936 ChimerSeq ChiTaRs ChiTaRs ACER3-ACER3 ACER3 chr11 76731737 ACER3 chr11 76731706 Exonic hg19 NA AA113041 Out-of-frame Intra-chr q13.5 q13.5 120937 ChimerSeq ChiTaRs ChiTaRs TFCP2-TFCP2 TFCP2 chr12 51566181 TFCP2 chr12 51512442 Exonic hg19 NA AA485991 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 Transcription factor 120938 ChimerSeq ChiTaRs ChiTaRs FEM1A-LOC493754 FEM1A chr19 4795581 LOC493754 chr7 66057242 Exonic hg19 NA BE744731 Out-of-frame Inter-chr p13.3 120939 ChimerSeq ChiTaRs ChiTaRs MLL-MLL MLL chr11 118394780 MLL chr11 118395263 Exonic hg19 NA BQ423051 Out-of-frame Intra-chr q23.3 q23.3 120940 ChimerSeq ChiTaRs ChiTaRs WARS-WARS WARS chr14 100801348 WARS chr14 100801062 Exonic hg19 NA T63251 Out-of-frame Intra-chr q32.2 q32.2 120941 ChimerSeq ChiTaRs ChiTaRs CHD4-CHD4 CHD4 chr12 6679616 CHD4 chr12 6690501 Exonic hg19 NA CN479401 Out-of-frame Intra-chr p13.31 p13.31 120942 ChimerSeq ChiTaRs ChiTaRs BRD4-BRD4 BRD4 chr19 15440216 BRD4 chr19 15409891 Exonic hg19 NA BF060731 Out-of-frame Intra-chr p13.12 Atypical:BRD p13.12 Atypical:BRD 120943 ChimerSeq ChiTaRs ChiTaRs RNF169-MYO18A RNF169 chr11 74531893 MYO18A chr17 27424892 Exonic hg19 NA BG949101 Out-of-frame Inter-chr q13.4 q11.2 Oncogene 120944 ChimerSeq ChiTaRs ChiTaRs UNC119B-UNC119B UNC119B chr12 121159484 UNC119B chr12 121159493 Exonic hg19 NA AA313741 Out-of-frame Intra-chr q24.31 q24.31 120945 ChimerSeq ChiTaRs ChiTaRs PLEKHG6-TEP1 PLEKHG6 chr12 6431736 TEP1 chr14 20841593 Exonic hg19 NA BF848201 Out-of-frame Inter-chr p13.31 q11.2 Tumor suppressor gene 120946 ChimerSeq ChiTaRs ChiTaRs ARL4D-ARL4D ARL4D chr17 41478504 ARL4D chr17 41478316 Exonic hg19 NA BM680221 3'UTR-CDS Intra-chr q21.31 q21.31 120947 ChimerSeq ChiTaRs ChiTaRs INF2-INF2 INF2 chr14 105179562 INF2 chr14 105180663 Exonic hg19 NA BM695911 Out-of-frame Intra-chr q32.33 q32.33 120948 ChimerSeq ChiTaRs ChiTaRs EFCAB11-EFCAB11 EFCAB11 chr14 90421104 EFCAB11 chr14 90263570 Exonic hg19 NA W28051 Out-of-frame Intra-chr q32.11 q32.11 120949 ChimerSeq ChiTaRs ChiTaRs MYBL2-MYBL2 MYBL2 chr20 42331219 MYBL2 chr20 42331220 Exonic hg19 NA BE264691 Out-of-frame Intra-chr q13.12 Transcription factor q13.12 Transcription factor 120950 ChimerSeq ChiTaRs ChiTaRs RNF114-ACTG1 RNF114 chr20 48569647 ACTG1 chr17 79476997 Exonic hg19 NA BF036781 Out-of-frame Inter-chr q13.13 q25.3 120951 ChimerSeq ChiTaRs ChiTaRs SNX29-RERG SNX29 chr16 12466458 RERG chr12 15282296 Exonic hg19 NA DB099261 Out-of-frame Inter-chr p13.13 p12.3 120952 ChimerSeq ChiTaRs ChiTaRs HBA2-NFE2L1 HBA2 chr16 223709 NFE2L1 chr17 46125771 Exonic hg19 NA AI131561 3'UTR-5'UTR Inter-chr p13.3 q21.32 Transcription factor 120953 ChimerSeq ChiTaRs ChiTaRs ABCA5-APOL3 ABCA5 chr17 67251984 APOL3 chr22 36555550 Exonic hg19 NA CV335051 Out-of-frame Inter-chr q24.3 q12.3 120954 ChimerSeq ChiTaRs ChiTaRs CEP112-LRBA CEP112 chr17 64188221 LRBA chr4 151185814 Exonic hg19 NA CR627301 Out-of-frame Inter-chr q24.1 q31.3 120955 ChimerSeq ChiTaRs ChiTaRs MALAT1-NEDD4L MALAT1 chr11 65269639 NEDD4L chr18 56056539 Exonic hg19 NA BX501711 Out-of-frame Inter-chr q13.1 q21.31 Tumor suppressor gene 120956 ChimerSeq ChiTaRs ChiTaRs GLTSCR1-GLTSCR1 GLTSCR1 chr19 48196935 GLTSCR1 chr19 48179060 Exonic hg19 NA BI518681 Out-of-frame Intra-chr Tumor suppressor gene Tumor suppressor gene 120957 ChimerSeq ChiTaRs ChiTaRs GPATCH8-HNRNPUL1 GPATCH8 chr17 42475215 HNRNPUL1 chr19 41782168 Exonic hg19 NA AW389911 Out-of-frame Inter-chr q21.31 q13.2 120958 ChimerSeq ChiTaRs ChiTaRs GSS-DHFR GSS chr20 33543560 DHFR chr5 79946695 Exonic hg19 NA L42531 Out-of-frame Inter-chr q11.22 q14.1 120959 ChimerSeq ChiTaRs ChiTaRs MLH3-ACSM3 MLH3 chr14 75485719 ACSM3 chr16 20792103 Exonic hg19 NA BQ316181 Out-of-frame Inter-chr q24.3 Tumor suppressor gene p12.3 120960 ChimerSeq ChiTaRs ChiTaRs TRIM25-HYOU1 TRIM25 chr17 54972624 HYOU1 chr11 118920283 Exonic hg19 NA BI050181 Out-of-frame Inter-chr q22 120961 ChimerSeq ChiTaRs ChiTaRs RSL1D1-RSL1D1 RSL1D1 chr16 11930505 RSL1D1 chr16 11930125 Exonic hg19 NA BQ353791 Out-of-frame Intra-chr p13.13 p13.13 120962 ChimerSeq ChiTaRs ChiTaRs RHBDF1-RHBDF1 RHBDF1 chr16 108164 RHBDF1 chr16 108342 Exonic hg19 NA BG035821 Out-of-frame Intra-chr p13.3 p13.3 120963 ChimerSeq ChiTaRs ChiTaRs MLL2-SUPT16H MLL2 chr12 49432458 SUPT16H chr14 21819635 Exonic hg19 NA AF152961 Out-of-frame Inter-chr q11.2 120964 ChimerSeq ChiTaRs ChiTaRs AKAP13-C3orf58 AKAP13 chr15 86288841 C3orf58 chr3 143709839 Exonic hg19 NA AF127481 Out-of-frame Inter-chr q25.3 q24 120965 ChimerSeq ChiTaRs ChiTaRs SNRPN-SNRPN SNRPN chr15 25213230 SNRPN chr15 25219468 Exonic hg19 NA BE273851 Out-of-frame Intra-chr q11.2 q11.2 120966 ChimerSeq ChiTaRs ChiTaRs KIRREL3-KIRREL3 KIRREL3 chr11 126811126 KIRREL3 chr11 126811114 Exonic hg19 NA BF362671 Out-of-frame Intra-chr q24.2 q24.2 120967 ChimerSeq ChiTaRs ChiTaRs TTLL1-UBE2R2 TTLL1 chr22 43443527 UBE2R2 chr9 33907867 Exonic hg19 NA AW362811 Out-of-frame Inter-chr q13.2 p13.3 120968 ChimerSeq ChiTaRs ChiTaRs PSEN1-TOPORS PSEN1 chr14 73686352 TOPORS chr9 32542623 Exonic hg19 NA BF839841 Out-of-frame Inter-chr q24.2 p21.1 Tumor suppressor gene Transcription factor 120969 ChimerSeq ChiTaRs ChiTaRs IRS2-MLH1 IRS2 chr13 110431766 MLH1 chr3 37091984 Exonic hg19 NA CA407691 Out-of-frame Inter-chr q34 Oncogene p22.2 Oncogene Tumor suppressor gene 120970 ChimerSeq ChiTaRs ChiTaRs DDX5-DDX5 DDX5 chr17 62496092 DDX5 chr17 62495906 Exonic hg19 NA CA314781 Out-of-frame Intra-chr q23.3 q23.3 120971 ChimerSeq ChiTaRs ChiTaRs IRF3-GNAS IRF3 chr19 50164744 GNAS chr20 57478055 Exonic hg19 NA CN315171 Out-of-frame Inter-chr q13.33 Tumor suppressor gene Transcription factor q13.32 Oncogene 120972 ChimerSeq ChiTaRs ChiTaRs SLC12A3-SLC12A3 SLC12A3 chr16 56926944 SLC12A3 chr16 56926924 Exonic hg19 NA BI764101 Out-of-frame Intra-chr q13 q13 120973 ChimerSeq ChiTaRs ChiTaRs TRABD-TRABD TRABD chr22 50637550 TRABD chr22 50637569 Exonic hg19 NA W79111 Out-of-frame Intra-chr q13.33 q13.33 120974 ChimerSeq ChiTaRs ChiTaRs ACRBP-MLXIP ACRBP chr12 6749321 MLXIP chr12 122627413 Exonic hg19 NA BQ345731 Out-of-frame Intra-chr p13.31 Transcription factor 120975 ChimerSeq ChiTaRs ChiTaRs TNFAIP2-CD2BP2 TNFAIP2 chr14 103603637 CD2BP2 chr16 30362421 Exonic hg19 NA BF916711 Out-of-frame Inter-chr q32.32 p11.2 120976 ChimerSeq ChiTaRs ChiTaRs DVL2-MAP3K10 DVL2 chr17 7130787 MAP3K10 chr19 40698142 Exonic hg19 NA BF527861 Out-of-frame Inter-chr p13.1 q13.2 120977 ChimerSeq ChiTaRs ChiTaRs IFT88-IFT88 IFT88 chr13 21238908 IFT88 chr13 21239720 Exonic hg19 NA AI621251 Out-of-frame Intra-chr q12.11 Tumor suppressor gene q12.11 Tumor suppressor gene 120978 ChimerSeq ChiTaRs ChiTaRs STAT5B-TBX19 STAT5B chr17 40401037 TBX19 chr1 168269658 Exonic hg19 NA DA009551 Out-of-frame Inter-chr q21.2 Transcription factor q24.2 Transcription factor 120979 ChimerSeq ChiTaRs ChiTaRs PLCB4-PLCB4 PLCB4 chr20 9417800 PLCB4 chr20 9388562 Exonic hg19 NA BE926711 Out-of-frame Intra-chr p12.3 p12.3 120980 ChimerSeq ChiTaRs ChiTaRs ARIH1-ARIH1 ARIH1 chr15 72780812 ARIH1 chr15 72782077 Exonic hg19 NA BE000781 Out-of-frame Intra-chr q24.1 q24.1 120981 ChimerSeq ChiTaRs ChiTaRs RNF40-RNF40 RNF40 chr16 30786147 RNF40 chr16 30780487 Exonic hg19 NA BQ212221 Out-of-frame Intra-chr p11.2 p11.2 120982 ChimerSeq ChiTaRs ChiTaRs TMOD3-PJA2 TMOD3 chr15 52192443 PJA2 chr5 108704020 Exonic hg19 NA AW818351 Out-of-frame Inter-chr q21.2 q21.3 120983 ChimerSeq ChiTaRs ChiTaRs ARHGEF12-ANKRD29 ARHGEF12 chr11 120207755 ANKRD29 chr18 21187562 Exonic hg19 NA AW898521 Out-of-frame Inter-chr q23.3 Tumor suppressor gene q11.2 120984 ChimerSeq ChiTaRs ChiTaRs NPC2-NPC2 NPC2 chr14 74946928 NPC2 chr14 74951170 Exonic hg19 NA BI018781 Out-of-frame Intra-chr q24.3 q24.3 120985 ChimerSeq ChiTaRs ChiTaRs C15orf63-HSPA4L C15orf63 chr15 44094039 HSPA4L chr4 128734053 Exonic hg19 NA BF700151 Out-of-frame Inter-chr q28.1 120986 ChimerSeq ChiTaRs ChiTaRs C11orf57-C11orf57 C11orf57 chr11 111953574 C11orf57 chr11 111949007 Exonic hg19 NA BM467811 Out-of-frame Intra-chr q23.1 q23.1 120987 ChimerSeq ChiTaRs ChiTaRs GOLGA5-GOLGA5 GOLGA5 chr14 93305988 GOLGA5 chr14 93305926 Exonic hg19 NA CN271521 Out-of-frame Intra-chr q32.12 q32.12 120988 ChimerSeq ChiTaRs ChiTaRs ATP5B-MSI2 ATP5B chr12 57032072 MSI2 chr17 55723353 Exonic hg19 NA BE676351 Out-of-frame Inter-chr q13.3 q22 120989 ChimerSeq ChiTaRs ChiTaRs BAHD1-BAHD1 BAHD1 chr15 40759259 BAHD1 chr15 40759233 Exonic hg19 NA R13921 Out-of-frame Intra-chr q15.1 q15.1 120990 ChimerSeq ChiTaRs ChiTaRs VSIG2-VSIG2 VSIG2 chr11 124620476 VSIG2 chr11 124620147 Exonic hg19 NA AW843261 Out-of-frame Intra-chr q24.2 q24.2 120991 ChimerSeq ChiTaRs ChiTaRs KLK6-KLK6 KLK6 chr19 51466577 KLK6 chr19 51471838 Exonic hg19 NA BQ361291 Out-of-frame Intra-chr q13.41 Tumor suppressor gene q13.41 Tumor suppressor gene 120992 ChimerSeq ChiTaRs ChiTaRs RUNX1-NLRP4 RUNX1 chr21 36259409 NLRP4 chr19 56392630 Exonic hg19 NA AY004251 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q13.43 120993 ChimerSeq ChiTaRs ChiTaRs SCN4A-SCN4A SCN4A chr17 62043501 SCN4A chr17 62049551 Exonic hg19 NA CD608181 Out-of-frame Intra-chr q23.3 q23.3 120994 ChimerSeq ChiTaRs ChiTaRs MUM1-MUM1 MUM1 chr19 1369578 MUM1 chr19 1369042 Exonic hg19 NA BX508411 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p13.3 Tumor suppressor gene 120995 ChimerSeq ChiTaRs ChiTaRs SDCBP2-SDCBP2 SDCBP2 chr20 1290876 SDCBP2 chr20 1290736 Exonic hg19 NA BE818561 Out-of-frame Intra-chr p13 p13 120996 ChimerSeq ChiTaRs ChiTaRs CHD4-CHD4 CHD4 chr12 6690246 CHD4 chr12 6679755 Exonic hg19 NA AI339871 Out-of-frame Intra-chr p13.31 p13.31 120997 ChimerSeq ChiTaRs ChiTaRs MCTP2-CRYAB MCTP2 chr15 94856827 CRYAB chr11 111780133 Exonic hg19 NA AK130291 Out-of-frame Inter-chr q26.2 q23.1 120998 ChimerSeq ChiTaRs ChiTaRs RALY-RALY RALY chr20 32665052 RALY chr20 32665033 Exonic hg19 NA BF091181 Out-of-frame Intra-chr q11.22 q11.22 120999 ChimerSeq ChiTaRs ChiTaRs STYX-STYX STYX chr14 53238781 STYX chr14 53239062 Exonic hg19 NA AW275131 Out-of-frame Intra-chr q22.1 q22.1 121000 ChimerSeq ChiTaRs ChiTaRs PNP-RAB7A PNP chr14 20945047 RAB7A chr3 128516859 Exonic hg19 NA BQ315891 Out-of-frame Inter-chr q11.2 Oncogene q21.3 Tumor suppressor gene 121001 ChimerSeq ChiTaRs ChiTaRs MYLPF-BCO2 MYLPF chr16 30389178 BCO2 chr11 112064279 Exonic hg19 NA F01021 Out-of-frame Inter-chr p11.2 q23.1 121002 ChimerSeq ChiTaRs ChiTaRs ZC3H7A-PLCB4 ZC3H7A chr16 11855086 PLCB4 chr20 9351444 Exonic hg19 NA DA775941 Out-of-frame Inter-chr p13.13 p12.3 121003 ChimerSeq ChiTaRs ChiTaRs RAD51B-RAD51B RAD51B chr14 68359018 RAD51B chr14 68358983 Exonic hg19 NA AL040421 Out-of-frame Intra-chr q24.1 q24.1 121004 ChimerSeq ChiTaRs ChiTaRs MALAT1-STK3 MALAT1 chr11 65266843 STK3 chr8 99692228 Exonic hg19 NA AW864171 Out-of-frame Inter-chr q13.1 q22.2 121005 ChimerSeq ChiTaRs ChiTaRs PPHLN1-NMI PPHLN1 chr12 42818932 NMI chr2 152129821 Exonic hg19 NA DA251271 Out-of-frame Inter-chr q12 q23.3 121006 ChimerSeq ChiTaRs ChiTaRs KCTD12-MATN2 KCTD12 chr13 77455019 MATN2 chr8 99039874 Exonic hg19 NA BE763321 Out-of-frame Inter-chr q22.3 q22.1 121007 ChimerSeq ChiTaRs ChiTaRs TIMP2-TIMP2 TIMP2 chr17 76851683 TIMP2 chr17 76851862 Exonic hg19 NA BM719411 Out-of-frame Intra-chr q25.3 q25.3 121008 ChimerSeq ChiTaRs ChiTaRs CTNS-KAT6A CTNS chr17 3560106 KAT6A chr8 41809053 Exonic hg19 NA BF854861 Out-of-frame Inter-chr p13.2 p11.21 Oncogene 121009 ChimerSeq ChiTaRs ChiTaRs C12orf29-CDH8 C12orf29 chr12 88443933 CDH8 chr16 61759204 Exonic hg19 NA AV732581 Out-of-frame Inter-chr q21.32 q21 121010 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65267651 MALAT1 chr11 65266960 Exonic hg19 NA DW410271 Out-of-frame Intra-chr q13.1 q13.1 121011 ChimerSeq ChiTaRs ChiTaRs COG1-FAM104A COG1 chr17 71202793 FAM104A chr17 71206904 Exonic hg19 NA BX091521 Out-of-frame Intra-chr q25.1 q25.1 121012 ChimerSeq ChiTaRs ChiTaRs PPP2R5E-MAP4K4 PPP2R5E chr14 63953843 MAP4K4 chr2 102493531 Exonic hg19 NA BI025151 Out-of-frame Inter-chr q23.2 q11.2 121013 ChimerSeq ChiTaRs ChiTaRs PPP1R1B-DDR1 PPP1R1B chr17 37792159 DDR1 chr6 2160158 Exonic hg19 NA BF923651 Out-of-frame Inter-chr q12 Tumor suppressor gene TK:DDR 121014 ChimerSeq ChiTaRs ChiTaRs ARGLU1-LPIN1 ARGLU1 chr13 107210889 LPIN1 chr2 11938938 Exonic hg19 NA BF365751 Out-of-frame Inter-chr q33.3 p25.1 121015 ChimerSeq ChiTaRs ChiTaRs PPFIA3-ERBB2 PPFIA3 chr19 49653900 ERBB2 chr17 37880996 Exonic hg19 NA BF837831 Out-of-frame Inter-chr q13.33 q12 Oncogene 121016 ChimerSeq ChiTaRs ChiTaRs SH2B3-ATXN2 SH2B3 chr12 111890008 ATXN2 chr12 111890930 Exonic hg19 NA Z78331 Out-of-frame Intra-chr q24.12 Tumor suppressor gene q24.12 121017 ChimerSeq ChiTaRs ChiTaRs CABIN1-CABIN1 CABIN1 chr22 24463009 CABIN1 chr22 24431908 Exonic hg19 NA AA344751 Out-of-frame Intra-chr 121018 ChimerSeq ChiTaRs ChiTaRs ITGAM-ITGAM ITGAM chr16 31336660 ITGAM chr16 31284757 Exonic hg19 NA BE144171 Out-of-frame Intra-chr p11.2 p11.2 121019 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65268121 MALAT1 chr11 65266782 Exonic hg19 NA CB852741 Out-of-frame Intra-chr q13.1 q13.1 121020 ChimerSeq ChiTaRs ChiTaRs RPS16-MCM5 RPS16 chr19 39924390 MCM5 chr22 35802570 Exonic hg19 NA BE621901 Out-of-frame Inter-chr q13.2 q12.3 121021 ChimerSeq ChiTaRs ChiTaRs MAP2K6-MAP2K6 MAP2K6 chr17 67538113 MAP2K6 chr17 67516476 Exonic hg19 NA F00521 Out-of-frame Intra-chr q24.3 STE:STE7 q24.3 STE:STE7 121022 ChimerSeq ChiTaRs ChiTaRs SRRM2-SRRM2 SRRM2 chr16 2820419 SRRM2 chr16 2820459 Exonic hg19 NA BF930781 Out-of-frame Intra-chr p13.3 p13.3 121023 ChimerSeq ChiTaRs ChiTaRs FARP1-SYN1 FARP1 chr13 99059419 SYN1 chrX 47445920 Exonic hg19 NA AI910121 Out-of-frame Inter-chr q32.2 p11.23 121024 ChimerSeq ChiTaRs ChiTaRs PIGU-YARS PIGU chr20 33158737 YARS chr1 33247965 Exonic hg19 NA AW367711 Out-of-frame Inter-chr q11.22 p35.1 121025 ChimerSeq ChiTaRs ChiTaRs MYH14-PLCG1 MYH14 chr19 50812157 PLCG1 chr20 39799116 Exonic hg19 NA BI014551 Out-of-frame Inter-chr q13.33 q12 Oncogene 121026 ChimerSeq ChiTaRs ChiTaRs SLC27A5-ESRRG SLC27A5 chr19 59015502 ESRRG chr1 216730758 Exonic hg19 NA AA457551 Out-of-frame Inter-chr q13.43 q41 Transcription factor 121027 ChimerSeq ChiTaRs ChiTaRs ANXA2-ANXA2 ANXA2 chr15 60647932 ANXA2 chr15 60649345 Exonic hg19 NA BF089231 Out-of-frame Intra-chr q22.2 q22.2 121028 ChimerSeq ChiTaRs ChiTaRs CELSR1-GLTP CELSR1 chr22 46757263 GLTP chr12 110290475 Exonic hg19 NA BE716461 Out-of-frame Inter-chr q13.31 q24.11 121029 ChimerSeq ChiTaRs ChiTaRs HAUS8-FAF1 HAUS8 chr19 17170420 FAF1 chr1 51406327 Exonic hg19 NA BQ318601 Out-of-frame Inter-chr p13.11 p32.3 121030 ChimerSeq ChiTaRs ChiTaRs EIF3D-EIF3D EIF3D chr22 36907705 EIF3D chr22 36907717 Exonic hg19 NA AA463841 Out-of-frame Intra-chr q12.3 q12.3 121031 ChimerSeq ChiTaRs ChiTaRs BCR-LOC220729 BCR chr22 23633318 LOC220729 chr3 197338404 Exonic hg19 NA AK128501 Out-of-frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene 121032 ChimerSeq ChiTaRs ChiTaRs USP8-TRPM7 USP8 chr15 50786927 TRPM7 chr15 50893025 Exonic hg19 NA BQ881111 Out-of-frame Intra-chr q21.2 q21.2 Seq+ 121033 ChimerSeq ChiTaRs ChiTaRs ARMC6-ARMC6 ARMC6 chr19 19168984 ARMC6 chr19 19168300 Exonic hg19 NA CB164781 Out-of-frame Intra-chr p13.11 p13.11 121034 ChimerSeq ChiTaRs ChiTaRs CDYL2-CDYL2 CDYL2 chr16 80835816 CDYL2 chr16 80821648 Exonic hg19 NA AA527971 Out-of-frame Intra-chr q23.2 q23.2 121035 ChimerSeq ChiTaRs ChiTaRs ZNF597-NPIPA1 ZNF597 chr16 3493494 NPIPA1 chr16 15026427 Exonic hg19 NA BC063821 Out-of-frame Intra-chr p13.3 Transcription factor 121036 ChimerSeq ChiTaRs ChiTaRs TMTC3-TMTC3 TMTC3 chr12 88592648 TMTC3 chr12 88592637 Exonic hg19 NA AA747891 Out-of-frame Intra-chr q21.32 q21.32 121037 ChimerSeq ChiTaRs ChiTaRs LAMA3-MET LAMA3 chr18 21453053 MET chr7 116326703 Exonic hg19 NA BE142651 Out-of-frame Inter-chr q11.2 q31.2 TK:Met Oncogene 121038 ChimerSeq ChiTaRs ChiTaRs RPL23A-SPEF2 RPL23A chr17 27050954 SPEF2 chr5 35651430 Exonic hg19 NA AW090311 Out-of-frame Inter-chr q11.2 p13.2 121039 ChimerSeq ChiTaRs ChiTaRs MLL-GNA15 MLL chr11 118358051 GNA15 chr19 3157358 Exonic hg19 NA AY839731 Out-of-frame Inter-chr q23.3 p13.3 121040 ChimerSeq ChiTaRs ChiTaRs HIF1A-OFD1 HIF1A chr14 62212432 OFD1 chrX 13755171 Exonic hg19 NA CD656091 Out-of-frame Inter-chr q23.2 Oncogene Tumor suppressor gene Transcription factor p22.2 121041 ChimerSeq ChiTaRs ChiTaRs SLC2A4RG-MOK SLC2A4RG chr20 62374857 MOK chr14 102699386 Exonic hg19 NA BF197331 Out-of-frame Inter-chr q13.33 Transcription factor q32.31 CMGC:RCK 121042 ChimerSeq ChiTaRs ChiTaRs APOE-LUC7L3 APOE chr19 45411931 LUC7L3 chr17 48807952 Exonic hg19 NA AI147021 Out-of-frame Inter-chr q13.32 q21.33 121043 ChimerSeq ChiTaRs ChiTaRs RIN3-RIN3 RIN3 chr14 93132496 RIN3 chr14 93132719 Exonic hg19 NA BG013791 Out-of-frame Intra-chr q32.12 q32.12 121044 ChimerSeq ChiTaRs ChiTaRs UBE2Q2-NFRKB UBE2Q2 chr15 76182825 NFRKB chr11 129734599 Exonic hg19 NA U08191 Out-of-frame Inter-chr q24.2 q24.3 121045 ChimerSeq ChiTaRs ChiTaRs TYMS-TRAIP TYMS chr18 661092 TRAIP chr3 49877735 Exonic hg19 NA DB026411 Out-of-frame Inter-chr p11.32 p21.31 121046 ChimerSeq ChiTaRs ChiTaRs LOC100130950-USP6 LOC100130950 chr17 5104846 USP6 chr17 5026755 Exonic hg19 NA X78261 Out-of-frame Intra-chr p13.2 121047 ChimerSeq ChiTaRs ChiTaRs MALAT1-U2AF2 MALAT1 chr11 65269224 U2AF2 chr19 56185313 Exonic hg19 NA BF508321 Out-of-frame Inter-chr q13.1 q13.42 121048 ChimerSeq ChiTaRs ChiTaRs SLC5A3-UBXN11 SLC5A3 chr21 35474616 UBXN11 chr1 26630048 Exonic hg19 NA BG991801 Out-of-frame Inter-chr q22.11 p36.11 121049 ChimerSeq ChiTaRs ChiTaRs NFE2L1-PRKCSH NFE2L1 chr17 46133531 PRKCSH chr19 11553215 Exonic hg19 NA BI001011 Out-of-frame Inter-chr q21.32 Transcription factor p13.2 121050 ChimerSeq ChiTaRs ChiTaRs MLLT1-MLLT1 MLLT1 chr19 6210562 MLLT1 chr19 6210546 Exonic hg19 NA CN478611 Out-of-frame Intra-chr p13.3 p13.3 121051 ChimerSeq ChiTaRs ChiTaRs COL6A1-COL6A1 COL6A1 chr21 47424694 COL6A1 chr21 47424027 Exonic hg19 NA AW577211 Out-of-frame Intra-chr q22.3 q22.3 121052 ChimerSeq ChiTaRs ChiTaRs RB1-TMEM65 RB1 chr13 48985224 TMEM65 chr8 125325920 Exonic hg19 NA AI591011 Out-of-frame Inter-chr q14.2 Oncogene Tumor suppressor gene q24.13 121053 ChimerSeq ChiTaRs ChiTaRs SLC5A10-FGG SLC5A10 chr17 18872216 FGG chr4 155533243 Exonic hg19 NA AV657691 Out-of-frame Inter-chr p11.2 q32.1 121054 ChimerSeq ChiTaRs ChiTaRs MYO9B-PPM1A MYO9B chr19 17208456 PPM1A chr14 60749661 Exonic hg19 NA BF904341 Out-of-frame Inter-chr p13.11 q23.1 Tumor suppressor gene 121055 ChimerSeq ChiTaRs ChiTaRs DSC2-DSC2 DSC2 chr18 28648046 DSC2 chr18 28648036 Exonic hg19 NA AA480631 Out-of-frame Intra-chr q12.1 Tumor suppressor gene q12.1 Tumor suppressor gene 121056 ChimerSeq ChiTaRs ChiTaRs STT3A-GJA1 STT3A chr11 125463073 GJA1 chr6 121769334 Exonic hg19 NA BE696961 Out-of-frame Inter-chr q24.2 q22.31 Tumor suppressor gene 121057 ChimerSeq ChiTaRs ChiTaRs GRN-TMEM54 GRN chr17 42428781 TMEM54 chr1 33361292 Exonic hg19 NA AW062631 Out-of-frame Inter-chr q21.31 p35.1 121058 ChimerSeq ChiTaRs ChiTaRs EIF3L-SEPT6 EIF3L chr22 38284548 2006_ 9_ 1_ chrX 118753550 Exonic hg19 NA BM561801 Out-of-frame Inter-chr q13.1 121059 ChimerSeq ChiTaRs ChiTaRs TSEN54-TSEN54 TSEN54 chr17 73518971 TSEN54 chr17 73520624 Exonic hg19 NA BX483091 Out-of-frame Intra-chr q25.1 q25.1 121060 ChimerSeq ChiTaRs ChiTaRs ATP12A-ATP12A ATP12A chr13 25285906 ATP12A chr13 25285705 Exonic hg19 NA BU675871 Out-of-frame Intra-chr q12.12 q12.12 121061 ChimerSeq ChiTaRs ChiTaRs ST8SIA5-ST8SIA5 ST8SIA5 chr18 44300590 ST8SIA5 chr18 44300115 Exonic hg19 NA W28821 Out-of-frame Intra-chr q21.1 q21.1 121062 ChimerSeq ChiTaRs ChiTaRs COMMD6-COMMD6 COMMD6 chr13 76100716 COMMD6 chr13 76100726 Exonic hg19 NA CB242821 Out-of-frame Intra-chr q22.2 q22.2 121063 ChimerSeq ChiTaRs ChiTaRs NFATC3-NFATC3 NFATC3 chr16 68260843 NFATC3 chr16 68261444 Exonic hg19 NA AA531091 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Transcription factor 121064 ChimerSeq ChiTaRs ChiTaRs CSNK1D-CSNK1D CSNK1D chr17 80226864 CSNK1D chr17 80227219 Exonic hg19 NA BG563951 Out-of-frame Intra-chr q25.3 q25.3 121065 ChimerSeq ChiTaRs ChiTaRs MEIS2-MEIS2 MEIS2 chr15 37183320 MEIS2 chr15 37183946 Exonic hg19 NA AI804571 Out-of-frame Intra-chr q14 Transcription factor q14 Transcription factor 121066 ChimerSeq ChiTaRs ChiTaRs C15orf27-ATN1 C15orf27 chr15 76398715 ATN1 chr12 7051191 Exonic hg19 NA BM681841 Out-of-frame Inter-chr p13.31 121067 ChimerSeq ChiTaRs ChiTaRs PCCA-PCCA PCCA chr13 100818454 PCCA chr13 100820153 Exonic hg19 NA BE071691 Out-of-frame Intra-chr q32.3 q32.3 121068 ChimerSeq ChiTaRs ChiTaRs NOL3-NOL3 NOL3 chr16 67209352 NOL3 chr16 67209338 Exonic hg19 NA CB052171 Out-of-frame Intra-chr q22.1 q22.1 121069 ChimerSeq ChiTaRs ChiTaRs CARHSP1-CARHSP1 CARHSP1 chr16 8947212 CARHSP1 chr16 8947238 Exonic hg19 NA AW003871 Out-of-frame Intra-chr p13.2 p13.2 121070 ChimerSeq ChiTaRs ChiTaRs TSPAN31-ALS2 TSPAN31 chr12 58142026 ALS2 chr2 202622027 Exonic hg19 NA AA768861 3'UTR-3'UTR Inter-chr q14.1 q33.1 121071 ChimerSeq ChiTaRs ChiTaRs CALM3-CALM3 CALM3 chr19 47113696 CALM3 chr19 47104584 Exonic hg19 NA M86171 Out-of-frame Intra-chr q13.32 q13.32 121072 ChimerSeq ChiTaRs ChiTaRs FAM155A-FAM155A FAM155A chr13 108505283 FAM155A chr13 108504514 Exonic hg19 NA AA558131 Out-of-frame Intra-chr q33.3 q33.3 121073 ChimerSeq ChiTaRs ChiTaRs CDON-EML5 CDON chr11 125833206 EML5 chr14 89214930 Exonic hg19 NA AI568591 Out-of-frame Inter-chr q24.2 q31.3 121074 ChimerSeq ChiTaRs ChiTaRs B4GALT5-HNRNPA1 B4GALT5 chr20 48252939 HNRNPA1 chr12 54676361 Exonic hg19 NA AW376281 Out-of-frame Inter-chr q13.13 q13.13 121075 ChimerSeq ChiTaRs ChiTaRs JUP-ADCY2 JUP chr17 39847898 ADCY2 chr1 152006137 Exonic hg19 NA AA159721 Out-of-frame Inter-chr q21.2 Tumor suppressor gene p15.31 121076 ChimerSeq ChiTaRs ChiTaRs FAM214A-FAM214A FAM214A chr15 52874170 FAM214A chr15 52874035 Exonic hg19 NA W32211 Out-of-frame Intra-chr q21.3 q21.3 121077 ChimerSeq ChiTaRs ChiTaRs MYH9-MYH9 MYH9 chr22 36677448 MYH9 chr22 36677567 Exonic hg19 NA CK000241 Out-of-frame Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Oncogene Tumor suppressor gene 121078 ChimerSeq ChiTaRs ChiTaRs GPD1-GPD1 GPD1 chr12 50501765 GPD1 chr12 50502347 Exonic hg19 NA U22961 Out-of-frame Intra-chr q13.12 q13.12 121079 ChimerSeq ChiTaRs ChiTaRs LOC100130987-UBAP2L LOC100130987 chr11 67088805 UBAP2L chr1 154232422 Exonic hg19 NA BM126441 Out-of-frame Inter-chr q21.3 121080 ChimerSeq ChiTaRs ChiTaRs UBL3-FZD5 UBL3 chr13 30341335 FZD5 chr2 208629114 Exonic hg19 NA BM670781 Out-of-frame Inter-chr q12.3 q33.3 121081 ChimerSeq ChiTaRs ChiTaRs EEF1A2-EEF1A2 EEF1A2 chr20 62126430 EEF1A2 chr20 62119718 Exonic hg19 NA BQ302601 Out-of-frame Intra-chr q13.33 q13.33 121082 ChimerSeq ChiTaRs ChiTaRs CNTD2-CNTD2 CNTD2 chr19 40728221 CNTD2 chr19 40729158 Exonic hg19 NA AI820581 Out-of-frame Intra-chr q13.2 q13.2 121083 ChimerSeq ChiTaRs ChiTaRs CD63-VARS2 CD63 chr12 56121103 VARS2 chr6 2186936 Exonic hg19 NA BF857641 Out-of-frame Inter-chr q13.2 121084 ChimerSeq ChiTaRs ChiTaRs NUCB1-SCN8A NUCB1 chr19 49425893 SCN8A chr12 52200990 Exonic hg19 NA BE818201 Out-of-frame Inter-chr q13.33 q13.13 121085 ChimerSeq ChiTaRs ChiTaRs CAPNS1-IGSF9 CAPNS1 chr19 36632029 IGSF9 chr1 159898492 Exonic hg19 NA BQ959731 Out-of-frame Inter-chr q13.12 q23.2 121086 ChimerSeq ChiTaRs ChiTaRs ATF4-ZDHHC7 ATF4 chr22 39916765 ZDHHC7 chr16 85010786 Exonic hg19 NA DA741051 Out-of-frame Inter-chr q13.1 Transcription factor q24.1 121087 ChimerSeq ChiTaRs ChiTaRs SRRM2-GPRC5A SRRM2 chr16 2821359 GPRC5A chr12 13064177 Exonic hg19 NA AA627941 Out-of-frame Inter-chr p13.3 p13.1 Tumor suppressor gene 121088 ChimerSeq ChiTaRs ChiTaRs JUND-CNOT8 JUND chr19 18391128 CNOT8 chr5 154238456 Exonic hg19 NA AW015591 Out-of-frame Inter-chr p13.11 Transcription factor q33.2 121089 ChimerSeq ChiTaRs ChiTaRs SMCHD1-AKAP10 SMCHD1 chr18 2699032 AKAP10 chr17 19834706 Exonic hg19 NA DW435741 Out-of-frame Inter-chr p11.32 Tumor suppressor gene p11.2 121090 ChimerSeq ChiTaRs ChiTaRs TNRC6B-TNRC6B TNRC6B chr22 40725055 TNRC6B chr22 40725506 Exonic hg19 NA BU736131 Out-of-frame Intra-chr q13.1 q13.1 121091 ChimerSeq ChiTaRs ChiTaRs TPM1-GK TPM1 chr15 63353135 GK chrX 30686569 Exonic hg19 NA AA089671 Out-of-frame Inter-chr q22.2 p21.2 121092 ChimerSeq ChiTaRs ChiTaRs STAT6-STAT6 STAT6 chr12 57493653 STAT6 chr12 57498081 Exonic hg19 NA BP379151 Out-of-frame Intra-chr q13.3 Transcription factor q13.3 Transcription factor 121093 ChimerSeq ChiTaRs ChiTaRs CTDSPL2-CTDSPL2 CTDSPL2 chr15 44724548 CTDSPL2 chr15 44730057 Exonic hg19 NA AA682671 Out-of-frame Intra-chr q15.3 q15.3 121094 ChimerSeq ChiTaRs ChiTaRs TMEM132C-CDH1 TMEM132C chr12 128928593 CDH1 chr16 68846084 Exonic hg19 NA BE816621 Out-of-frame Inter-chr q24.32 q22.1 Oncogene Tumor suppressor gene 121095 ChimerSeq ChiTaRs ChiTaRs MALAT1-TMC5 MALAT1 chr11 65267021 TMC5 chr16 19482745 Exonic hg19 NA BG961411 Out-of-frame Inter-chr q13.1 p12.3 121096 ChimerSeq ChiTaRs ChiTaRs ZC3H18-TMSB10 ZC3H18 chr16 88691148 TMSB10 chr2 85133696 Exonic hg19 NA BG113811 Out-of-frame Inter-chr q24.2 p11.2 121097 ChimerSeq ChiTaRs ChiTaRs WWOX-ATP11A WWOX chr16 78534498 ATP11A chr13 113464661 Exonic hg19 NA BF871751 Out-of-frame Inter-chr q23.1 Tumor suppressor gene q34 121098 ChimerSeq ChiTaRs ChiTaRs NEAT1-C3 NEAT1 chr11 65193652 C3 chr19 6697753 Exonic hg19 NA BF880801 Out-of-frame Inter-chr q13.1 p13.3 121099 ChimerSeq ChiTaRs ChiTaRs CPT1A-C16orf72 CPT1A chr11 68522488 C16orf72 chr16 9210267 Exonic hg19 NA BM970771 Out-of-frame Inter-chr q13.3 p13.2 121100 ChimerSeq ChiTaRs ChiTaRs MED15-MED15 MED15 chr22 20923885 MED15 chr22 20928720 Exonic hg19 NA BF999641 Out-of-frame Intra-chr q11.21 q11.21 121101 ChimerSeq ChiTaRs ChiTaRs ATP5E-GARS ATP5E chr20 57607390 GARS chr7 30643155 Exonic hg19 NA BM753471 Out-of-frame Inter-chr q13.32 p14.3 121102 ChimerSeq ChiTaRs ChiTaRs COX6B1-SORL1 COX6B1 chr19 36149676 SORL1 chr11 121503003 Exonic hg19 NA AA573421 Out-of-frame Inter-chr q13.12 q24.1 121103 ChimerSeq ChiTaRs ChiTaRs LRTOMT-LRTOMT LRTOMT chr11 71809906 LRTOMT chr11 71810157 Exonic hg19 NA R19501 Out-of-frame Intra-chr q13.4 q13.4 121104 ChimerSeq ChiTaRs ChiTaRs ZNF708-ILF3 ZNF708 chr19 21479706 ILF3 chr19 10801555 Exonic hg19 NA BI036811 Out-of-frame Intra-chr p12 Transcription factor p13.2 121105 ChimerSeq ChiTaRs ChiTaRs SEC23B-SEC23B SEC23B chr20 18541377 SEC23B chr20 18529375 Exonic hg19 NA BG222141 Out-of-frame Intra-chr p11.23 p11.23 121106 ChimerSeq ChiTaRs ChiTaRs TMEM11-SLC43A2 TMEM11 chr17 21117763 SLC43A2 chr17 1478904 Exonic hg19 NA DA828211 Out-of-frame Intra-chr p11.2 121107 ChimerSeq ChiTaRs ChiTaRs TLE2-TLE2 TLE2 chr19 3005925 TLE2 chr19 3005953 Exonic hg19 NA BF806201 Out-of-frame Intra-chr p13.3 p13.3 121108 ChimerSeq ChiTaRs ChiTaRs MALAT1-SPG21 MALAT1 chr11 65266845 SPG21 chr15 65255638 Exonic hg19 NA AW802671 Out-of-frame Inter-chr q13.1 q22.31 121109 ChimerSeq ChiTaRs ChiTaRs ZNF529-NEAT1 ZNF529 chr19 37075248 NEAT1 chr11 65210353 Exonic hg19 NA BE813571 Out-of-frame Inter-chr q13.12 Transcription factor q13.1 121110 ChimerSeq ChiTaRs ChiTaRs ZMYND15-ZMYND15 ZMYND15 chr17 4649408 ZMYND15 chr17 4643560 Exonic hg19 NA AL041801 Out-of-frame Intra-chr p13.2 p13.2 121111 ChimerSeq ChiTaRs ChiTaRs ADARB1-ADARB1 ADARB1 chr21 46517786 ADARB1 chr21 46517476 Exonic hg19 NA CV351341 Out-of-frame Intra-chr q22.3 Tumor suppressor gene q22.3 Tumor suppressor gene 121112 ChimerSeq ChiTaRs ChiTaRs HNRNPUL1-DNAJC14 HNRNPUL1 chr19 41810459 DNAJC14 chr12 56221496 Exonic hg19 NA BF916621 Out-of-frame Inter-chr q13.2 q13.2 121113 ChimerSeq ChiTaRs ChiTaRs PML-PML PML chr15 74325640 PML chr15 74315456 Exonic hg19 NA AW606071 Out-of-frame Intra-chr q24.1 Oncogene Tumor suppressor gene q24.1 Oncogene Tumor suppressor gene 121114 ChimerSeq ChiTaRs ChiTaRs APP-PDLIM3 APP chr21 27541655 PDLIM3 chr4 186436303 Exonic hg19 NA Z17821 Out-of-frame Inter-chr q21.3 q35.1 121115 ChimerSeq ChiTaRs ChiTaRs LOC400043-HAT1 LOC400043 chr12 54525032 HAT1 chr2 172836606 Exonic hg19 NA AI792151 Out-of-frame Inter-chr q31.1 121116 ChimerSeq ChiTaRs ChiTaRs EPS15L1-MOB2 EPS15L1 chr19 16485385 MOB2 chr11 1774551 Exonic hg19 NA BI042611 Out-of-frame Inter-chr p13.11 p15.5 121117 ChimerSeq ChiTaRs ChiTaRs CYP19A1-CDK12 CYP19A1 chr15 51629053 CDK12 chr17 37670574 Exonic hg19 NA BF990611 Out-of-frame Inter-chr q21.2 q12 Oncogene 121118 ChimerSeq ChiTaRs ChiTaRs PPP1CC-CENPF PPP1CC chr12 111158145 CENPF chr1 214794182 Exonic hg19 NA AI064871 Out-of-frame Inter-chr q24.11 q41 121119 ChimerSeq ChiTaRs ChiTaRs LINC00478-SACM1L LINC00478 chr21 17624398 SACM1L chr3 45786080 Exonic hg19 NA CB410891 Out-of-frame Inter-chr p21.31 121120 ChimerSeq ChiTaRs ChiTaRs ACTG1-MYB ACTG1 chr17 79479306 MYB chr6 135513463 Exonic hg19 NA BE092001 Out-of-frame Inter-chr q25.3 q23.3 Oncogene Transcription factor 121121 ChimerSeq ChiTaRs ChiTaRs COG4-COG4 COG4 chr16 70543265 COG4 chr16 70517847 Exonic hg19 NA BG983301 Out-of-frame Intra-chr q22.1 q22.1 121122 ChimerSeq ChiTaRs ChiTaRs YIF1B-YIF1B YIF1B chr19 38796132 YIF1B chr19 38797611 Exonic hg19 NA AA557951 Out-of-frame Intra-chr q13.2 q13.2 121123 ChimerSeq ChiTaRs ChiTaRs ARID4A-C14orf37 ARID4A chr14 58772831 C14orf37 chr14 58730422 Exonic hg19 NA BC047301 Out-of-frame Intra-chr q23.1 q23.1 121124 ChimerSeq ChiTaRs ChiTaRs RILPL1-SEC24C RILPL1 chr12 124013569 SEC24C chr10 75519814 Exonic hg19 NA BE829581 Out-of-frame Inter-chr q24.31 q22.2 121125 ChimerSeq ChiTaRs ChiTaRs BCAS1-BCAS1 BCAS1 chr20 52560216 BCAS1 chr20 52560129 Exonic hg19 NA H88501 Out-of-frame Intra-chr q13.2 q13.2 121126 ChimerSeq ChiTaRs ChiTaRs KIAA1468-KIAA1468 KIAA1468 chr18 59888699 KIAA1468 chr18 59888666 Exonic hg19 NA AB040901 Out-of-frame Intra-chr q21.33 q21.33 121127 ChimerSeq ChiTaRs ChiTaRs SLC38A2-POR SLC38A2 chr12 46766556 POR chr7 75612866 Exonic hg19 NA AU136321 Out-of-frame Inter-chr q13.11 q11.23 121128 ChimerSeq ChiTaRs ChiTaRs C17orf62-ENTPD4 C17orf62 chr17 80400578 ENTPD4 chr8 23289140 Exonic hg19 NA AA465661 Out-of-frame Inter-chr q25.3 p21.3 121129 ChimerSeq ChiTaRs ChiTaRs NCOR2-FBXO33 NCOR2 chr12 124868092 FBXO33 chr14 39896063 Exonic hg19 NA AA580941 Out-of-frame Inter-chr q24.31 q21.1 121130 ChimerSeq ChiTaRs ChiTaRs SYNE2-SYNE2 SYNE2 chr14 64641844 SYNE2 chr14 64641832 Exonic hg19 NA BF815061 Out-of-frame Intra-chr q23.2 q23.2 121131 ChimerSeq ChiTaRs ChiTaRs RBFOX3-C4orf22 RBFOX3 chr17 77478680 C4orf22 chr4 81550798 Exonic hg19 NA DA120291 Out-of-frame Inter-chr q25.3 q21.21 121132 ChimerSeq ChiTaRs ChiTaRs CTSF-CTSF CTSF chr11 66333328 CTSF chr11 66331021 Exonic hg19 NA BX113081 Out-of-frame Intra-chr q13.2 q13.2 121133 ChimerSeq ChiTaRs ChiTaRs DGKA-RGS22 DGKA chr12 56347782 RGS22 chr8 101051221 Exonic hg19 NA AW340041 Out-of-frame Inter-chr q13.2 q22.2 121134 ChimerSeq ChiTaRs ChiTaRs ZNF83-COL5A1 ZNF83 chr19 53144914 COL5A1 chr9 137735075 Exonic hg19 NA AW608191 Out-of-frame Inter-chr q13.41 Transcription factor q34.3 121135 ChimerSeq ChiTaRs ChiTaRs SMARCC2-CEP95 SMARCC2 chr12 56574847 CEP95 chr17 62532792 Exonic hg19 NA BE830381 Out-of-frame Inter-chr q13.2 q23.3 121136 ChimerSeq ChiTaRs ChiTaRs CUEDC1-AKIP1 CUEDC1 chr17 55940564 AKIP1 chr11 8936590 Exonic hg19 NA AI633361 Out-of-frame Inter-chr q22 p15.4 121137 ChimerSeq ChiTaRs ChiTaRs UBE2V1-ARFGEF1 UBE2V1 chr20 48718902 ARFGEF1 chr8 68112631 Exonic hg19 NA BF841691 Out-of-frame Inter-chr q13.13 q13.2 121138 ChimerSeq ChiTaRs ChiTaRs TNNT1-TNNT1 TNNT1 chr19 55653265 TNNT1 chr19 55644231 Exonic hg19 NA BE962861 Out-of-frame Intra-chr q13.42 q13.42 121139 ChimerSeq ChiTaRs ChiTaRs RBM14-RBM14 RBM14 chr11 66393091 RBM14 chr11 66392305 Exonic hg19 NA AI821591 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 Tumor suppressor gene 121140 ChimerSeq ChiTaRs ChiTaRs AARS-GPX3 AARS chr16 70287931 GPX3 chr5 150407985 Exonic hg19 NA BF848871 Out-of-frame Inter-chr q22.1 q33.1 Tumor suppressor gene 121141 ChimerSeq ChiTaRs ChiTaRs TCF3-TCF3 TCF3 chr19 1611629 TCF3 chr19 1611298 Exonic hg19 NA AL079531 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p13.3 Oncogene Tumor suppressor gene Transcription factor 121142 ChimerSeq ChiTaRs ChiTaRs PIAS2-PIAS2 PIAS2 chr18 44401128 PIAS2 chr18 44400857 Exonic hg19 NA AA244401 Out-of-frame Intra-chr q21.1 q21.1 121143 ChimerSeq ChiTaRs ChiTaRs NR2F6-NR2F6 NR2F6 chr19 17342795 NR2F6 chr19 17342781 Exonic hg19 NA H20021 Out-of-frame Intra-chr p13.11 Transcription factor p13.11 Transcription factor 121144 ChimerSeq ChiTaRs ChiTaRs KIAA0195-KIAA1324L KIAA0195 chr17 73455875 KIAA1324L chr7 86541425 Exonic hg19 NA BF869951 Out-of-frame Inter-chr q21.12 121145 ChimerSeq ChiTaRs ChiTaRs ACAD10-ACAD10 ACAD10 chr12 112166158 ACAD10 chr12 112166195 Exonic hg19 NA AW886471 Out-of-frame Intra-chr q24.12 q24.12 121146 ChimerSeq ChiTaRs ChiTaRs COCH-LINC00299 COCH chr14 31364262 LINC00299 chr2 8409120 Exonic hg19 NA AI280231 Out-of-frame Inter-chr q12 p25.1 121147 ChimerSeq ChiTaRs ChiTaRs ZDHHC17-ZDHHC17 ZDHHC17 chr12 77246516 ZDHHC17 chr12 77246497 Exonic hg19 NA BG120601 Out-of-frame Intra-chr q21.2 q21.2 121148 ChimerSeq ChiTaRs ChiTaRs PIM3-GARS PIM3 chr22 50357720 GARS chr7 30655591 Exonic hg19 NA BC021081 3'UTR-CDS Inter-chr q13.33 CAMK:PIM p14.3 121149 ChimerSeq ChiTaRs ChiTaRs SRGAP1-DOPEY1 SRGAP1 chr12 64488914 DOPEY1 chr6 83833144 Exonic hg19 NA T07741 Out-of-frame Inter-chr q14.2 q14.1 121150 ChimerSeq ChiTaRs ChiTaRs IPO5-IPO5 IPO5 chr13 98662413 IPO5 chr13 98655171 Exonic hg19 NA CN352531 Out-of-frame Intra-chr q32.2 q32.2 121151 ChimerSeq ChiTaRs ChiTaRs WSB1-WSB1 WSB1 chr17 25639903 WSB1 chr17 25638579 Exonic hg19 NA AI807901 Out-of-frame Intra-chr q11.1 q11.1 121152 ChimerSeq ChiTaRs ChiTaRs ARHGEF12-ARHGEF12 ARHGEF12 chr11 120358799 ARHGEF12 chr11 120327901 Exonic hg19 NA AI291721 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene 121153 ChimerSeq ChiTaRs ChiTaRs RAP1GAP2-CTTNBP2NL RAP1GAP2 chr17 2940240 CTTNBP2NL chr1 112945294 Exonic hg19 NA BE181351 Out-of-frame Inter-chr p13.3 p13.2 121154 ChimerSeq ChiTaRs ChiTaRs ACVRL1-SH3D19 ACVRL1 chr12 52315898 SH3D19 chr4 152047374 Exonic hg19 NA BF843581 Out-of-frame Inter-chr q13.13 Oncogene q31.3 121155 ChimerSeq ChiTaRs ChiTaRs RNF24-LRRC58 RNF24 chr20 3978897 LRRC58 chr3 120046819 Exonic hg19 NA CN263391 Out-of-frame Inter-chr p13 q13.33 121156 ChimerSeq ChiTaRs ChiTaRs PRSS23-LRPPRC PRSS23 chr11 86520225 LRPPRC chr2 44184155 Exonic hg19 NA AI392841 Out-of-frame Inter-chr q14.2 p21 121157 ChimerSeq ChiTaRs ChiTaRs PLCB4-GBE1 PLCB4 chr20 9149611 GBE1 chr3 81780156 Exonic hg19 NA BF346361 Out-of-frame Inter-chr p12.3 p12.2 121158 ChimerSeq ChiTaRs ChiTaRs MEG3-MEG3 MEG3 chr14 101316415 MEG3 chr14 101316404 Exonic hg19 NA AI133721 Out-of-frame Intra-chr q32.2 Tumor suppressor gene q32.2 Tumor suppressor gene 121159 ChimerSeq ChiTaRs ChiTaRs BAHCC1-SFTA3 BAHCC1 chr17 79433267 SFTA3 chr14 36986277 Exonic hg19 NA BI002401 Out-of-frame Inter-chr q25.3 q13.3 121160 ChimerSeq ChiTaRs ChiTaRs PPP1R12A-CEP152 PPP1R12A chr12 80311004 CEP152 chr15 49079669 Exonic hg19 NA AI809151 Out-of-frame Inter-chr q21.31 q21.1 121161 ChimerSeq ChiTaRs ChiTaRs FTL-MAP3K5 FTL chr19 49469700 MAP3K5 chr6 137060018 Exonic hg19 NA BF738851 Out-of-frame Inter-chr q13.33 q23.3 STE:STE11 121162 ChimerSeq ChiTaRs ChiTaRs TTC7B-NT5E TTC7B chr14 91233389 NT5E chr6 86201732 Exonic hg19 NA BU622781 Out-of-frame Inter-chr q32.11 q14.3 121163 ChimerSeq ChiTaRs ChiTaRs TNFRSF1A-TNFRSF1A TNFRSF1A chr12 6451202 TNFRSF1A chr12 6443357 Exonic hg19 NA AU310151 Out-of-frame Intra-chr p13.31 p13.31 121164 ChimerSeq ChiTaRs ChiTaRs GAS6-GAS6 GAS6 chr13 114534732 GAS6 chr13 114535166 Exonic hg19 NA BF755561 Out-of-frame Intra-chr q34 Oncogene q34 Oncogene 121165 ChimerSeq ChiTaRs ChiTaRs CALM1-CALM1 CALM1 chr14 90871129 CALM1 chr14 90871960 Exonic hg19 NA AI918711 Out-of-frame Intra-chr q32.11 q32.11 121166 ChimerSeq ChiTaRs ChiTaRs KXD1-UFC1 KXD1 chr19 18680190 UFC1 chr1 161123836 Exonic hg19 NA AI198351 Out-of-frame Inter-chr p13.11 q23.3 121167 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65267091 MALAT1 chr11 65266587 Exonic hg19 NA BG011651 Out-of-frame Intra-chr q13.1 q13.1 121168 ChimerSeq ChiTaRs ChiTaRs CHD4-CHD4 CHD4 chr12 6679741 CHD4 chr12 6690527 Exonic hg19 NA BQ575181 Out-of-frame Intra-chr p13.31 p13.31 121169 ChimerSeq ChiTaRs ChiTaRs GPI-STAR GPI chr19 34893244 STAR chr8 38001350 Exonic hg19 NA AV703221 Out-of-frame Inter-chr p11.23 Tumor suppressor gene 121170 ChimerSeq ChiTaRs ChiTaRs GPI-TM2D1 GPI chr19 34890958 TM2D1 chr1 62147846 Exonic hg19 NA BE898941 Out-of-frame Inter-chr p31.3 121171 ChimerSeq ChiTaRs ChiTaRs LLPH-LLPH LLPH chr12 66531930 LLPH chr12 66531614 Exonic hg19 NA BM924511 Out-of-frame Intra-chr q14.3 q14.3 121172 ChimerSeq ChiTaRs ChiTaRs RERGL-GRIK3 RERGL chr12 18234345 GRIK3 chr1 37284661 Exonic hg19 NA BI046511 Out-of-frame Inter-chr p12.3 p34.3 121173 ChimerSeq ChiTaRs ChiTaRs DOT1L-COL6A1 DOT1L chr19 2220134 COL6A1 chr21 47420032 Exonic hg19 NA BF850201 Out-of-frame Inter-chr p13.3 Oncogene Transcription factor q22.3 121174 ChimerSeq ChiTaRs ChiTaRs TFIP11-C14orf37 TFIP11 chr22 26904294 C14orf37 chr14 58736960 Exonic hg19 NA AW379321 Out-of-frame Inter-chr q12.1 q23.1 121175 ChimerSeq ChiTaRs ChiTaRs RPS16-CCND1 RPS16 chr19 39924320 CCND1 chr11 69468257 Exonic hg19 NA BU620241 Out-of-frame Inter-chr q13.2 q13.3 Oncogene 121176 ChimerSeq ChiTaRs ChiTaRs MMP12-TMEM232 MMP12 chr11 102734906 TMEM232 chr5 110036300 Exonic hg19 NA BF989261 Out-of-frame Inter-chr q22.2 q22.1 121177 ChimerSeq ChiTaRs ChiTaRs NTRK3-NTRK3 NTRK3 chr15 88521948 NTRK3 chr15 88521615 Exonic hg19 NA AL134171 Out-of-frame Intra-chr q25.3 Oncogene Tumor suppressor gene q25.3 Oncogene Tumor suppressor gene 121178 ChimerSeq ChiTaRs ChiTaRs SNX5-C8orf44-SGK3 SNX5 chr20 17936707 C8orf44-SGK3 chr8 67607989 Exonic hg19 NA AW362291 Out-of-frame Inter-chr p11.23 q13.1 121179 ChimerSeq ChiTaRs ChiTaRs NIPSNAP1-COL1A1 NIPSNAP1 chr22 29951867 COL1A1 chr17 48265236 Exonic hg19 NA AW664321 3'UTR-CDS Inter-chr q12.2 q21.33 Oncogene 121180 ChimerSeq ChiTaRs ChiTaRs ACOT1-OAS3 ACOT1 chr14 74036258 OAS3 chr12 113410085 Exonic hg19 NA BM915691 Out-of-frame Inter-chr q24.3 q24.13 121181 ChimerSeq ChiTaRs ChiTaRs VAT1-HNRNPA1 VAT1 chr17 41166905 HNRNPA1 chr12 54676016 Exonic hg19 NA AI339411 Out-of-frame Inter-chr q21.31 q13.13 121182 ChimerSeq ChiTaRs ChiTaRs EEA1-MUM1 EEA1 chr12 93229140 MUM1 chr19 1376411 Exonic hg19 NA AA278831 Out-of-frame Inter-chr q22 Transcription factor p13.3 Tumor suppressor gene 121183 ChimerSeq ChiTaRs ChiTaRs BCAT1-BCAT1 BCAT1 chr12 24967834 BCAT1 chr12 24968777 Exonic hg19 NA AA743391 Out-of-frame Intra-chr p12.1 p12.1 121184 ChimerSeq ChiTaRs ChiTaRs NXT1-TNRC6B NXT1 chr20 23332278 TNRC6B chr22 40447156 Exonic hg19 NA BX492251 Out-of-frame Inter-chr p11.21 q13.1 121185 ChimerSeq ChiTaRs ChiTaRs MGAT5B-ZNF358 MGAT5B chr17 74902163 ZNF358 chr19 7585435 Exonic hg19 NA AK057861 Out-of-frame Inter-chr q25.2 p13.2 Transcription factor 121186 ChimerSeq ChiTaRs ChiTaRs PTMS-FHOD3 PTMS chr12 6879792 FHOD3 chr18 34232499 Exonic hg19 NA BF091881 Out-of-frame Inter-chr p13.31 q12.2 121187 ChimerSeq ChiTaRs ChiTaRs TSPEAR-TSPEAR TSPEAR chr21 45929209 TSPEAR chr21 45929262 Exonic hg19 NA AJ003551 Out-of-frame Intra-chr q22.3 q22.3 121188 ChimerSeq ChiTaRs ChiTaRs ZNF609-ZNF609 ZNF609 chr15 64792357 ZNF609 chr15 64915064 Exonic hg19 NA BQ310511 Out-of-frame Intra-chr q22.31 Transcription factor q22.31 Transcription factor 121189 ChimerSeq ChiTaRs ChiTaRs KLF13-KLF13 KLF13 chr15 31669352 KLF13 chr15 31667802 Exonic hg19 NA BF738021 Out-of-frame Intra-chr Transcription factor Transcription factor 121190 ChimerSeq ChiTaRs ChiTaRs EIF3D-EIF3D EIF3D chr22 36908650 EIF3D chr22 36919942 Exonic hg19 NA CD688331 Out-of-frame Intra-chr q12.3 q12.3 121191 ChimerSeq ChiTaRs ChiTaRs SAP18-SAP18 SAP18 chr13 21721555 SAP18 chr13 21721053 Exonic hg19 NA BM968611 Out-of-frame Intra-chr q12.11 q12.11 121192 ChimerSeq ChiTaRs ChiTaRs CHORDC1-ANKRD34B CHORDC1 chr11 89933831 ANKRD34B chr5 79864695 Exonic hg19 NA AA985061 Out-of-frame Inter-chr q14.3 q14.1 121193 ChimerSeq ChiTaRs ChiTaRs C11orf75-CHODL C11orf75 chr11 93211926 CHODL chr21 19437070 Exonic hg19 NA AW511581 Out-of-frame Inter-chr q21.1 121194 ChimerSeq ChiTaRs ChiTaRs TMEM11-BOD1L1 TMEM11 chr17 21117764 BOD1L1 chr4 13578586 Exonic hg19 NA DA672851 Out-of-frame Inter-chr p11.2 p15.33 121195 ChimerSeq ChiTaRs ChiTaRs FASN-LAMB1 FASN chr17 80051160 LAMB1 chr7 107601021 Exonic hg19 NA BE818191 Out-of-frame Inter-chr q25.3 q31.1 121196 ChimerSeq ChiTaRs ChiTaRs ERGIC3-ERGIC3 ERGIC3 chr20 34145405 ERGIC3 chr20 34145232 Exonic hg19 NA BF512631 3'UTR-CDS Intra-chr q11.22 q11.22 121197 ChimerSeq ChiTaRs ChiTaRs CCDC88B-CD97 CCDC88B chr11 64117859 CD97 chr19 14516239 Exonic hg19 NA AK074141 Out-of-frame Inter-chr q13.1 121198 ChimerSeq ChiTaRs ChiTaRs POLR2F-PIH1D1 POLR2F chr22 38368835 PIH1D1 chr19 49949917 Exonic hg19 NA BF961261 Out-of-frame Inter-chr q13.1 q13.33 121199 ChimerSeq ChiTaRs ChiTaRs CSDA-HIPK2 CSDA chr12 10854617 HIPK2 chr7 139260004 Exonic hg19 NA BI046011 Out-of-frame Inter-chr q34 CMGC:DYRK Tumor suppressor gene 121200 ChimerSeq ChiTaRs ChiTaRs SIPA1L1-SIPA1L1 SIPA1L1 chr14 72200450 SIPA1L1 chr14 72190409 Exonic hg19 NA CR936651 Out-of-frame Intra-chr q24.2 q24.2 121201 ChimerSeq ChiTaRs ChiTaRs SMARCA4-SMARCA4 SMARCA4 chr19 11136258 SMARCA4 chr19 11136141 Exonic hg19 NA BE255521 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Oncogene Tumor suppressor gene 121202 ChimerSeq ChiTaRs ChiTaRs ITPR2-ITPR2 ITPR2 chr12 26490266 ITPR2 chr12 26490256 Exonic hg19 NA AA526621 Out-of-frame Intra-chr p11.23 p11.23 121203 ChimerSeq ChiTaRs ChiTaRs STARD9-LRRC8D STARD9 chr15 42984346 LRRC8D chr1 90351386 Exonic hg19 NA BF370571 Out-of-frame Inter-chr q15.2 p22.2 121204 ChimerSeq ChiTaRs ChiTaRs RAB8B-STK19 RAB8B chr15 63482542 STK19 chr6 3273108 Exonic hg19 NA BI000121 Out-of-frame Inter-chr q22.2 121205 ChimerSeq ChiTaRs ChiTaRs BLCAP-FTH1 BLCAP chr20 36147737 FTH1 chr11 61732037 Exonic hg19 NA BC001481 Out-of-frame Inter-chr q11.23 Tumor suppressor gene q12.3 121206 ChimerSeq ChiTaRs ChiTaRs BSG-FBXL19 BSG chr19 583428 FBXL19 chr16 30935819 Exonic hg19 NA BF762451 Out-of-frame Inter-chr p13.3 p11.2 Transcription factor 121207 ChimerSeq ChiTaRs ChiTaRs POLR2A-POLR2A POLR2A chr17 7400828 POLR2A chr17 7401012 Exonic hg19 NA BF514571 Out-of-frame Intra-chr p13.1 p13.1 121208 ChimerSeq ChiTaRs ChiTaRs TMED2-TMED2 TMED2 chr12 124081419 TMED2 chr12 124081219 Exonic hg19 NA AA533651 Out-of-frame Intra-chr q24.31 q24.31 121209 ChimerSeq ChiTaRs ChiTaRs ATP6V1D-LPCAT2 ATP6V1D chr14 67804936 LPCAT2 chr16 55600700 Exonic hg19 NA AI333351 Out-of-frame Inter-chr q23.3 q12.2 121210 ChimerSeq ChiTaRs ChiTaRs BIRC5-SPDYA BIRC5 chr17 76210826 SPDYA chr2 29050056 Exonic hg19 NA DB443041 Out-of-frame Inter-chr q25.3 Oncogene p23.2 121211 ChimerSeq ChiTaRs ChiTaRs CTDSPL2-CTDSPL2 CTDSPL2 chr15 44801426 CTDSPL2 chr15 44801088 Exonic hg19 NA CV315431 Out-of-frame Intra-chr q15.3 q15.3 121212 ChimerSeq ChiTaRs ChiTaRs DYRK1A-PRRC2C DYRK1A chr21 38845017 PRRC2C chr1 171559158 Exonic hg19 NA BE717051 Out-of-frame Inter-chr q22.13 CMGC:DYRK q24.3 121213 ChimerSeq ChiTaRs ChiTaRs NADSYN1-NADSYN1 NADSYN1 chr11 71200243 NADSYN1 chr11 71199558 Exonic hg19 NA BG995391 Out-of-frame Intra-chr q13.4 q13.4 121214 ChimerSeq ChiTaRs ChiTaRs SMARCB1-SMARCB1 SMARCB1 chr22 24129429 SMARCB1 chr22 24159021 Exonic hg19 NA BE933271 Out-of-frame Intra-chr q11.23 Oncogene Tumor suppressor gene q11.23 Oncogene Tumor suppressor gene 121215 ChimerSeq ChiTaRs ChiTaRs NUP85-NUP85 NUP85 chr17 73231853 NUP85 chr17 73231707 Exonic hg19 NA CA313471 Out-of-frame Intra-chr q25.1 q25.1 121216 ChimerSeq ChiTaRs ChiTaRs TPM4-PROM1 TPM4 chr19 16191064 PROM1 chr4 15980665 Exonic hg19 NA BG955881 Out-of-frame Inter-chr p13.12 p15.32 121217 ChimerSeq ChiTaRs ChiTaRs NFIX-CHCHD3 NFIX chr19 13207015 CHCHD3 chr7 132719269 Exonic hg19 NA BC052801 Out-of-frame Inter-chr p13.13 Transcription factor q33 Transcription factor 121218 ChimerSeq ChiTaRs ChiTaRs PIGT-CTNNA2 PIGT chr20 44048017 CTNNA2 chr2 80392168 Exonic hg19 NA BE938441 Out-of-frame Inter-chr q13.12 p12 Tumor suppressor gene 121219 ChimerSeq ChiTaRs ChiTaRs SLC43A2-SLC43A2 SLC43A2 chr17 1478980 SLC43A2 chr17 1478974 Exonic hg19 NA BF879851 Out-of-frame Intra-chr 121220 ChimerSeq ChiTaRs ChiTaRs SLC47A1-SLC47A1 SLC47A1 chr17 19439775 SLC47A1 chr17 19444980 Exonic hg19 NA AI638691 Out-of-frame Intra-chr p11.2 p11.2 121221 ChimerSeq ChiTaRs ChiTaRs FKBP3-RGS5 FKBP3 chr14 45587296 RGS5 chr1 163124135 Exonic hg19 NA BE708371 Out-of-frame Inter-chr q21.2 q23.3 121222 ChimerSeq ChiTaRs ChiTaRs SF3B3-SF1 SF3B3 chr16 70557884 SF1 chr11 64534661 Exonic hg19 NA AA324241 Out-of-frame Inter-chr q22.1 q13.1 121223 ChimerSeq ChiTaRs ChiTaRs RTDR1-RTDR1 RTDR1 chr22 23466843 RTDR1 chr22 23437817 Exonic hg19 NA CB218251 Out-of-frame Intra-chr 121224 ChimerSeq ChiTaRs ChiTaRs RPL28-EPB41L1 RPL28 chr19 55899717 EPB41L1 chr20 34773218 Exonic hg19 NA AA776201 Out-of-frame Inter-chr q13.42 q11.23 121225 ChimerSeq ChiTaRs ChiTaRs NDUFB1-FKBP8 NDUFB1 chr14 92588016 FKBP8 chr19 18649338 Exonic hg19 NA BI910091 Out-of-frame Inter-chr q32.12 p13.11 121226 ChimerSeq ChiTaRs ChiTaRs PLEKHG2-PLEKHG2 PLEKHG2 chr19 39916057 PLEKHG2 chr19 39916117 Exonic hg19 NA BI010391 Out-of-frame Intra-chr q13.2 q13.2 121227 ChimerSeq ChiTaRs ChiTaRs LATS2-TXN LATS2 chr13 21547384 TXN chr9 113006300 Exonic hg19 NA D58281 Out-of-frame Inter-chr q12.11 AGC:NDR Tumor suppressor gene q31.3 121228 ChimerSeq ChiTaRs ChiTaRs GSTP1-XRCC5 GSTP1 chr11 67352713 XRCC5 chr2 217002818 Exonic hg19 NA BF819091 Out-of-frame Inter-chr q13.2 Tumor suppressor gene q35 Tumor suppressor gene 121229 ChimerSeq ChiTaRs ChiTaRs FMNL1-FMNL1 FMNL1 chr17 43311272 FMNL1 chr17 43311255 Exonic hg19 NA AK131091 Out-of-frame Intra-chr q21.31 q21.31 121230 ChimerSeq ChiTaRs ChiTaRs SHMT1-MLLT11 SHMT1 chr17 18236753 MLLT11 chr1 151040932 Exonic hg19 NA AX747021 Out-of-frame Inter-chr p11.2 q21.3 121231 ChimerSeq ChiTaRs ChiTaRs ADPGK-ADPGK ADPGK chr15 73048703 ADPGK chr15 73049844 Exonic hg19 NA BQ669361 Out-of-frame Intra-chr q24.1 q24.1 121232 ChimerSeq ChiTaRs ChiTaRs SNRPN-SNRPN SNRPN chr15 25213229 SNRPN chr15 25219468 Exonic hg19 NA BC000611 5'UTR-5'UTR Intra-chr q11.2 q11.2 121233 ChimerSeq ChiTaRs ChiTaRs LOC100507373-GGNBP2 LOC100507373 chr19 14260827 GGNBP2 chr17 34937836 Exonic hg19 NA BM977311 Out-of-frame Inter-chr Tumor suppressor gene 121234 ChimerSeq ChiTaRs ChiTaRs RAB27A-RAB27A RAB27A chr15 55558907 RAB27A chr15 55558929 Exonic hg19 NA BF837211 Out-of-frame Intra-chr q21.3 q21.3 121235 ChimerSeq ChiTaRs ChiTaRs STARD3-BEAN1 STARD3 chr17 37815799 BEAN1 chr16 66510767 Exonic hg19 NA M85471 Out-of-frame Inter-chr q12 q21 121236 ChimerSeq ChiTaRs ChiTaRs ACSS1-SPTLC1 ACSS1 chr20 24987843 SPTLC1 chr9 94794795 Exonic hg19 NA BG951421 Out-of-frame Inter-chr p11.21 q22.31 121237 ChimerSeq ChiTaRs ChiTaRs CEACAM7-STIP1 CEACAM7 chr19 42191140 STIP1 chr11 63960700 Exonic hg19 NA BQ326141 Out-of-frame Inter-chr q13.1 121238 ChimerSeq ChiTaRs ChiTaRs TCHP-UBASH3A TCHP chr12 110390958 UBASH3A chr21 43867264 Exonic hg19 NA BI024691 Out-of-frame Inter-chr q24.11 Tumor suppressor gene q22.3 121239 ChimerSeq ChiTaRs ChiTaRs BICD1-BICD1 BICD1 chr12 32480848 BICD1 chr12 32483967 Exonic hg19 NA AW367751 Out-of-frame Intra-chr p11.21 p11.21 121240 ChimerSeq ChiTaRs ChiTaRs GOLGA8A-CRLF2 GOLGA8A chr15 34672964 CRLF2 chrY 1455149 Exonic hg19 NA BC064341 Out-of-frame Inter-chr q14 p22.33 Oncogene 121241 ChimerSeq ChiTaRs ChiTaRs KDM2B-KDM2B KDM2B chr12 121867205 KDM2B chr12 121867386 Exonic hg19 NA CN344771 Out-of-frame Intra-chr q24.31 Transcription factor q24.31 Transcription factor 121242 ChimerSeq ChiTaRs ChiTaRs THOC5-PATZ1 THOC5 chr22 29939532 PATZ1 chr22 31735096 Exonic hg19 NA BF743471 Out-of-frame Intra-chr q12.2 q12.2 Transcription factor 121243 ChimerSeq ChiTaRs ChiTaRs UQCRC2-UQCRC2 UQCRC2 chr16 21983376 UQCRC2 chr16 21974105 Exonic hg19 NA BF692871 Out-of-frame Intra-chr 121244 ChimerSeq ChiTaRs ChiTaRs UBE2V1-PARP6 UBE2V1 chr20 48700707 PARP6 chr15 72562887 Exonic hg19 NA BF799501 Out-of-frame Inter-chr q13.13 q23 121245 ChimerSeq ChiTaRs ChiTaRs TMEM199-TFIP11 TMEM199 chr17 26694750 TFIP11 chr22 26888218 Exonic hg19 NA CB164301 Out-of-frame Inter-chr q11.2 q12.1 121246 ChimerSeq ChiTaRs ChiTaRs OS9-OS9 OS9 chr12 58089790 OS9 chr12 58088535 Exonic hg19 NA AA037271 Out-of-frame Intra-chr q13.3 q13.3 121247 ChimerSeq ChiTaRs ChiTaRs ZNF423-ZNF423 ZNF423 chr16 49524640 ZNF423 chr16 49524900 Exonic hg19 NA CN287451 Out-of-frame Intra-chr q12.1 Transcription factor q12.1 Transcription factor 121248 ChimerSeq ChiTaRs ChiTaRs PITPNC1-PITPNC1 PITPNC1 chr17 65395890 PITPNC1 chr17 65429461 Exonic hg19 NA AW935131 Out-of-frame Intra-chr q24.2 q24.2 121249 ChimerSeq ChiTaRs ChiTaRs RAP2A-AFTPH RAP2A chr13 98118212 AFTPH chr2 64819389 Exonic hg19 NA BE178971 Out-of-frame Inter-chr q32.1 p14 121250 ChimerSeq ChiTaRs ChiTaRs TRBV20-1-BCAS3 TRBV20-1 chr16 1988609 BCAS3 chr17 59470058 Exonic hg19 NA BF755861 Out-of-frame Inter-chr q23.2 121251 ChimerSeq ChiTaRs ChiTaRs LDLR-ABAT LDLR chr19 11244491 ABAT chr16 8877665 Exonic hg19 NA AA002171 Out-of-frame Inter-chr p13.2 p13.2 121252 ChimerSeq ChiTaRs ChiTaRs METRN-NR4A1 METRN chr16 767480 NR4A1 chr12 52452911 Exonic hg19 NA BM998971 3'UTR-3'UTR Inter-chr p13.3 q13.13 Tumor suppressor gene Transcription factor 121253 ChimerSeq ChiTaRs ChiTaRs KPNA3-SND1 KPNA3 chr13 50275778 SND1 chr7 127618399 Exonic hg19 NA BE180861 Out-of-frame Inter-chr q14.2 q32.1 121254 ChimerSeq ChiTaRs ChiTaRs AMZ2-SCAP AMZ2 chr17 66251930 SCAP chr3 47455200 Exonic hg19 NA BG254511 Out-of-frame Inter-chr q24.2 p21.31 121255 ChimerSeq ChiTaRs ChiTaRs TRIP4-ADORA3 TRIP4 chr15 64713987 ADORA3 chr1 112025970 Exonic hg19 NA AF226731 Out-of-frame Inter-chr q22.31 p13.2 121256 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65270528 MALAT1 chr11 65270259 Exonic hg19 NA AA577941 Out-of-frame Intra-chr q13.1 q13.1 121257 ChimerSeq ChiTaRs ChiTaRs SAMD14-LARP1 SAMD14 chr17 48191603 LARP1 chr5 154182339 Exonic hg19 NA AI636681 Out-of-frame Inter-chr q21.33 q33.2 121258 ChimerSeq ChiTaRs ChiTaRs ZFP106-TMEM131 ZFP106 chr15 42731932 TMEM131 chr2 98426019 Exonic hg19 NA BF817901 Out-of-frame Inter-chr q11.2 121259 ChimerSeq ChiTaRs ChiTaRs ACTG1-DGCR6L ACTG1 chr17 79479805 DGCR6L chr22 20301799 Exonic hg19 NA CN257271 Out-of-frame Inter-chr q25.3 q11.21 121260 ChimerSeq ChiTaRs ChiTaRs LGALS9-LGALS9B LGALS9 chr17 25975890 LGALS9B chr17 20355127 Exonic hg19 NA BG980811 Out-of-frame Intra-chr q11.2 p11.2 121261 ChimerSeq ChiTaRs ChiTaRs DCAF7-DCAF7 DCAF7 chr17 61662607 DCAF7 chr17 61657220 Exonic hg19 NA BI031911 Out-of-frame Intra-chr q23.3 q23.3 121262 ChimerSeq ChiTaRs ChiTaRs RBM25-CENPT RBM25 chr14 73555064 CENPT chr16 67877449 Exonic hg19 NA BI029781 Out-of-frame Inter-chr q24.2 q22.1 Transcription factor 121263 ChimerSeq ChiTaRs ChiTaRs CSNK1D-FN1 CSNK1D chr17 80224474 FN1 chr2 216274400 Exonic hg19 NA BE812971 Out-of-frame Inter-chr q25.3 q35 Oncogene 121264 ChimerSeq ChiTaRs ChiTaRs ZNFX1-ZNFX1 ZNFX1 chr20 47862668 ZNFX1 chr20 47862755 Exonic hg19 NA BU607651 Out-of-frame Intra-chr q13.13 q13.13 121265 ChimerSeq ChiTaRs ChiTaRs C12orf10-C12orf10 C12orf10 chr12 53693868 C12orf10 chr12 53693503 Exonic hg19 NA CB046471 Out-of-frame Intra-chr q13.13 q13.13 121266 ChimerSeq ChiTaRs ChiTaRs PSPC1-ENKUR PSPC1 chr13 20294255 ENKUR chr10 25313385 Exonic hg19 NA BM722311 Out-of-frame Inter-chr q12.11 p12.1 121267 ChimerSeq ChiTaRs ChiTaRs CTCF-CTCF CTCF chr16 67645185 CTCF chr16 67644861 Exonic hg19 NA BF897891 Out-of-frame Intra-chr q22.1 Tumor suppressor gene Transcription factor q22.1 Tumor suppressor gene Transcription factor 121268 ChimerSeq ChiTaRs ChiTaRs RCN2-RCN2 RCN2 chr15 77242245 RCN2 chr15 77241945 Exonic hg19 NA AW150981 Out-of-frame Intra-chr q24.3 q24.3 121269 ChimerSeq ChiTaRs ChiTaRs FAM222B-FAM222B FAM222B chr17 27084125 FAM222B chr17 27083741 Exonic hg19 NA CB852091 Out-of-frame Intra-chr q11.2 q11.2 121270 ChimerSeq ChiTaRs ChiTaRs GNAS-GNAS GNAS chr20 57485852 GNAS chr20 57485838 Exonic hg19 NA BF339151 Out-of-frame Intra-chr q13.32 Oncogene q13.32 Oncogene 121271 ChimerSeq ChiTaRs ChiTaRs NFATC3-NDUFA1 NFATC3 chr16 68260614 NDUFA1 chrX 119005876 Exonic hg19 NA CB162061 Out-of-frame Inter-chr q22.1 Transcription factor q24 121272 ChimerSeq ChiTaRs ChiTaRs PCNX-FANCD2 PCNX chr14 71436211 FANCD2 chr3 10136927 Exonic hg19 NA AW867801 Out-of-frame Inter-chr p25.3 Oncogene 121273 ChimerSeq ChiTaRs ChiTaRs FCGRT-RASSF4 FCGRT chr19 50028518 RASSF4 chr10 45466422 Exonic hg19 NA AI937071 Out-of-frame Inter-chr q13.33 q11.21 Tumor suppressor gene 121274 ChimerSeq ChiTaRs ChiTaRs RTF1-RTF1 RTF1 chr15 41768039 RTF1 chr15 41767899 Exonic hg19 NA BI040771 Out-of-frame Intra-chr q15.1 q15.1 121275 ChimerSeq ChiTaRs ChiTaRs CEP128-RHOA CEP128 chr14 81408136 RHOA chr3 49397772 Exonic hg19 NA AU119001 Out-of-frame Inter-chr q31.1 p21.31 Oncogene Tumor suppressor gene 121276 ChimerSeq ChiTaRs ChiTaRs RECQL-HAO2 RECQL chr12 21654546 HAO2 chr1 119928261 Exonic hg19 NA AI110601 Out-of-frame Inter-chr p12.1 p12 121277 ChimerSeq ChiTaRs ChiTaRs UCP2-EIF4G1 UCP2 chr11 73685963 EIF4G1 chr3 184045158 Exonic hg19 NA BQ016901 Out-of-frame Inter-chr q13.4 q27.1 121278 ChimerSeq ChiTaRs ChiTaRs GMIP-SLC6A9 GMIP chr19 19744885 SLC6A9 chr1 44468708 Exonic hg19 NA BF801161 Out-of-frame Inter-chr p13.11 p34.1 121279 ChimerSeq ChiTaRs ChiTaRs MCAM-UBE2Q2P2 MCAM chr11 119181869 UBE2Q2P2 chr15 82664398 Exonic hg19 NA BC007261 Out-of-frame Inter-chr q23.3 121280 ChimerSeq ChiTaRs ChiTaRs LOC100507246-IL13RA1 LOC100507246 chr17 74559912 IL13RA1 chrX 117926543 Exonic hg19 NA BQ436512 Out-of-frame Inter-chr q24 121281 ChimerSeq ChiTaRs ChiTaRs TRIM25-TRIM25 TRIM25 chr17 54972737 TRIM25 chr17 54972740 Exonic hg19 NA BF994652 Out-of-frame Intra-chr q22 q22 121282 ChimerSeq ChiTaRs ChiTaRs TP53-ARHGAP26 TP53 chr17 7571951 ARHGAP26 chr5 142297940 Exonic hg19 NA CB048242 Out-of-frame Inter-chr p13.1 Oncogene Tumor suppressor gene Transcription factor q31.3 121283 ChimerSeq ChiTaRs ChiTaRs MINK1-MINK1 MINK1 chr17 4800492 MINK1 chr17 4799861 Exonic hg19 NA BI009462 Out-of-frame Intra-chr p13.2 p13.2 121284 ChimerSeq ChiTaRs ChiTaRs PDE9A-DNAJC5B PDE9A chr21 44110439 DNAJC5B chr8 67011191 Exonic hg19 NA BI045962 Out-of-frame Inter-chr q22.3 q13.1 121285 ChimerSeq ChiTaRs ChiTaRs TM6SF1-LSAMP TM6SF1 chr15 83795977 LSAMP chr3 115888009 Exonic hg19 NA BQ010902 Out-of-frame Inter-chr q25.2 q13.31 Tumor suppressor gene 121286 ChimerSeq ChiTaRs ChiTaRs ATP5B-CLU ATP5B chr12 57037268 CLU chr8 27462542 Exonic hg19 NA BF819282 Out-of-frame Inter-chr q13.3 p21.1 Tumor suppressor gene 121287 ChimerSeq ChiTaRs ChiTaRs NME2-MAGI1 NME2 chr17 49246528 MAGI1 chr3 65763434 Exonic hg19 NA AW964262 Out-of-frame Inter-chr q21.33 Transcription factor Oncogene 121288 ChimerSeq ChiTaRs ChiTaRs ITPR2-EIF5 ITPR2 chr12 26854081 EIF5 chr14 103800574 Exonic hg19 NA AI133642 Out-of-frame Inter-chr p11.23 q32.32 121289 ChimerSeq ChiTaRs ChiTaRs ATXN2-RBBP8 ATXN2 chr12 111890334 RBBP8 chr18 20581625 Exonic hg19 NA AA773762 Out-of-frame Inter-chr q24.12 q11.2 Tumor suppressor gene 121290 ChimerSeq ChiTaRs ChiTaRs RPL27-C1orf210 RPL27 chr17 41154976 C1orf210 chr1 43747912 Exonic hg19 NA BU674462 Out-of-frame Inter-chr q21.31 p34.2 121291 ChimerSeq ChiTaRs ChiTaRs FTL-FTL FTL chr19 49469899 FTL chr19 49468566 Exonic hg19 NA BQ315742 Out-of-frame Intra-chr q13.33 q13.33 121292 ChimerSeq ChiTaRs ChiTaRs YWHAH-YWHAH YWHAH chr22 32352887 YWHAH chr22 32352573 Exonic hg19 NA BF904422 Out-of-frame Intra-chr q12.3 q12.3 121293 ChimerSeq ChiTaRs ChiTaRs ACTN1-CNOT10 ACTN1 chr14 69431721 CNOT10 chr3 32804251 Exonic hg19 NA BE837802 Out-of-frame Inter-chr q24.1 p22.3 121294 ChimerSeq ChiTaRs ChiTaRs ANKRD11-ANKRD11 ANKRD11 chr16 89350716 ANKRD11 chr16 89349736 Exonic hg19 NA AA581362 Out-of-frame Intra-chr q24.3 q24.3 121295 ChimerSeq ChiTaRs ChiTaRs SPOP-C6orf132 SPOP chr17 47677680 C6orf132 chr6 42074527 Exonic hg19 NA BF812662 Out-of-frame Inter-chr q21.33 Oncogene Tumor suppressor gene p21.1 121296 ChimerSeq ChiTaRs ChiTaRs LRCH1-RNPEP LRCH1 chr13 47135130 RNPEP chr1 201968635 Exonic hg19 NA C16632 Out-of-frame Inter-chr q14.13 q32.1 121297 ChimerSeq ChiTaRs ChiTaRs SMARCC2-SOGA1 SMARCC2 chr12 56557163 SOGA1 chr20 35412547 Exonic hg19 NA AW295202 Out-of-frame Inter-chr q13.2 q11.23 121298 ChimerSeq ChiTaRs ChiTaRs MLL-MLL MLL chr11 118353210 MLL chr11 118352428 Exonic hg19 NA AF272372 Out-of-frame Intra-chr q23.3 q23.3 121299 ChimerSeq ChiTaRs ChiTaRs MYO18A-MYO18A MYO18A chr17 27401386 MYO18A chr17 27400591 Exonic hg19 NA AW503292 Out-of-frame Intra-chr q11.2 Oncogene q11.2 Oncogene 121300 ChimerSeq ChiTaRs ChiTaRs MAPK8IP3-TNRC18 MAPK8IP3 chr16 1794712 TNRC18 chr7 5404674 Exonic hg19 NA AW889582 Out-of-frame Inter-chr p13.3 p22.1 121301 ChimerSeq ChiTaRs ChiTaRs ROMO1-MAPKAPK5 ROMO1 chr20 34288902 MAPKAPK5 chr12 112331098 Exonic hg19 NA CA312732 3'UTR-3'UTR Inter-chr q11.22 q24.12 CAMK:MAPKAPK 121302 ChimerSeq ChiTaRs ChiTaRs SMARCA4-PTMA SMARCA4 chr19 11145730 PTMA chr2 232576658 Exonic hg19 NA CN347182 Out-of-frame Inter-chr p13.2 Oncogene Tumor suppressor gene q37.1 121303 ChimerSeq ChiTaRs ChiTaRs ANAPC5-ACYP2 ANAPC5 chr12 121766987 ACYP2 chr2 54365846 Exonic hg19 NA BF924122 Out-of-frame Inter-chr q24.31 p16.2 121304 ChimerSeq ChiTaRs ChiTaRs ITGA3-LAMB3 ITGA3 chr17 48167838 LAMB3 chr1 209788338 Exonic hg19 NA CB122452 Out-of-frame Inter-chr q21.33 q32.2 121305 ChimerSeq ChiTaRs ChiTaRs N4BP2L1-N4BP2L1 N4BP2L1 chr13 33002315 N4BP2L1 chr13 32999541 Exonic hg19 NA BF433332 5'UTR-CDS Intra-chr q13.1 q13.1 121306 ChimerSeq ChiTaRs ChiTaRs EGLN3-C17orf85 EGLN3 chr14 34405130 C17orf85 chr17 3726078 Exonic hg19 NA AW817092 Out-of-frame Inter-chr q13.1 Tumor suppressor gene 121307 ChimerSeq ChiTaRs ChiTaRs MAPK8IP3-GGA2 MAPK8IP3 chr16 1804884 GGA2 chr16 23476263 Exonic hg19 NA BQ719332 Out-of-frame Intra-chr p13.3 p12.2 121308 ChimerSeq ChiTaRs ChiTaRs ZFP36L1-FGB ZFP36L1 chr14 69255154 FGB chr4 155491882 Exonic hg19 NA BG568132 Out-of-frame Inter-chr q24.1 q31.3 121309 ChimerSeq ChiTaRs ChiTaRs SEH1L-MTCH1 SEH1L chr18 12986710 MTCH1 chr6 36939011 Exonic hg19 NA BE772602 Out-of-frame Inter-chr p11.21 p21.2 121310 ChimerSeq ChiTaRs ChiTaRs MIB1-MIB1 MIB1 chr18 19359647 MIB1 chr18 19345728 Exonic hg19 NA BQ187522 Out-of-frame Intra-chr q11.2 q11.2 121311 ChimerSeq ChiTaRs ChiTaRs VPS53-STAT2 VPS53 chr17 418558 STAT2 chr12 56743265 Exonic hg19 NA BE349542 Out-of-frame Inter-chr Tumor suppressor gene q13.3 Transcription factor 121312 ChimerSeq ChiTaRs ChiTaRs TMEM116-TMEM116 TMEM116 chr12 112371795 TMEM116 chr12 112374584 Exonic hg19 NA BF953602 Out-of-frame Intra-chr q24.13 q24.13 121313 ChimerSeq ChiTaRs ChiTaRs TPT1-TPT1 TPT1 chr13 45911450 TPT1 chr13 45911432 Exonic hg19 NA CB306762 Out-of-frame Intra-chr q14.13 q14.13 121314 ChimerSeq ChiTaRs ChiTaRs TTC28-AS1-TTC28-AS1 TTC28-AS1 chr22 28319456 TTC28-AS1 chr22 28319409 Exonic hg19 NA AL135272 Out-of-frame Intra-chr q12.1 q12.1 Tumor suppressor gene 121315 ChimerSeq ChiTaRs ChiTaRs TROAP-TROAP TROAP chr12 49725508 TROAP chr12 49724279 Exonic hg19 NA AA704972 Out-of-frame Intra-chr q13.12 q13.12 121316 ChimerSeq ChiTaRs ChiTaRs PLD3-PLD3 PLD3 chr19 40884390 PLD3 chr19 40871778 Exonic hg19 NA CA310232 3'UTR-CDS Intra-chr q13.2 q13.2 121317 ChimerSeq ChiTaRs ChiTaRs N4BP1-N4BP1 N4BP1 chr16 48595490 N4BP1 chr16 48595531 Exonic hg19 NA AW663512 Out-of-frame Intra-chr q12.1 q12.1 121318 ChimerSeq ChiTaRs ChiTaRs NCKAP5L-GNL1 NCKAP5L chr12 50186066 GNL1 chr6 1843853 Exonic hg19 NA BF929762 Out-of-frame Inter-chr q13.12 121319 ChimerSeq ChiTaRs ChiTaRs WNK1-NR3C1 WNK1 chr12 948825 NR3C1 chr5 142657912 Exonic hg19 NA AW800842 Out-of-frame Inter-chr p13.33 q31.3 Transcription factor 121320 ChimerSeq ChiTaRs ChiTaRs MED26-MED26 MED26 chr19 16696010 MED26 chr19 16695675 Exonic hg19 NA BG953012 Out-of-frame Intra-chr p13.11 p13.11 121321 ChimerSeq ChiTaRs ChiTaRs PRKCB-BCL11A PRKCB chr16 23895872 BCL11A chr2 60679529 Exonic hg19 NA BI030492 Out-of-frame Inter-chr p12.2 Tumor suppressor gene p16.1 Oncogene Transcription factor 121322 ChimerSeq ChiTaRs ChiTaRs FAT3-FAT3 FAT3 chr11 92086534 FAT3 chr11 92087952 Exonic hg19 NA BF476342 Out-of-frame Intra-chr 121323 ChimerSeq ChiTaRs ChiTaRs PTPRT-PTPRT PTPRT chr20 41076821 PTPRT chr20 41077107 Exonic hg19 NA AA669592 Out-of-frame Intra-chr q13.11 Oncogene Tumor suppressor gene q13.11 Oncogene Tumor suppressor gene 121324 ChimerSeq ChiTaRs ChiTaRs CTSZ-COL1A1 CTSZ chr20 57570716 COL1A1 chr17 48275532 Exonic hg19 NA BF432042 Out-of-frame Inter-chr q13.32 q21.33 Oncogene 121325 ChimerSeq ChiTaRs ChiTaRs NADSYN1-NADSYN1 NADSYN1 chr11 71209491 NADSYN1 chr11 71209486 Exonic hg19 NA BI906282 Out-of-frame Intra-chr q13.4 q13.4 121326 ChimerSeq ChiTaRs ChiTaRs TSHZ1-TSHZ1 TSHZ1 chr18 73000139 TSHZ1 chr18 73000128 Exonic hg19 NA BQ214002 Out-of-frame Intra-chr q22.3 Transcription factor q22.3 Transcription factor 121327 ChimerSeq ChiTaRs ChiTaRs SEZ6L-PHF3 SEZ6L chr22 26594420 PHF3 chr6 64422373 Exonic hg19 NA BF934112 Out-of-frame Inter-chr q12.1 q12 121328 ChimerSeq ChiTaRs ChiTaRs PRPF8-PRPF8 PRPF8 chr17 1556958 PRPF8 chr17 1556842 Exonic hg19 NA CN414192 Out-of-frame Intra-chr 121329 ChimerSeq ChiTaRs ChiTaRs BORA-DIS3 BORA chr13 73329436 DIS3 chr13 73336895 Exonic hg19 NA AW993722 Out-of-frame Intra-chr q21.33 q21.33 121330 ChimerSeq ChiTaRs ChiTaRs MGAT4C-LOC400655 MGAT4C chr12 86650169 LOC400655 chr18 70826776 Exonic hg19 NA BU567782 Out-of-frame Inter-chr 121331 ChimerSeq ChiTaRs ChiTaRs SPIRE2-SRC SPIRE2 chr16 89933026 SRC chr20 36033038 Exonic hg19 NA BI045492 Out-of-frame Inter-chr q24.3 q11.23 TK:Src Oncogene 121332 ChimerSeq ChiTaRs ChiTaRs CPNE1-PAPD4 CPNE1 chr20 34240010 PAPD4 chr5 78965292 Exonic hg19 NA AI537252 Out-of-frame Inter-chr q11.22 q14.1 121333 ChimerSeq ChiTaRs ChiTaRs DTNA-GABARAPL1 DTNA chr18 32259553 GABARAPL1 chr12 10365475 Exonic hg19 NA DA275662 Out-of-frame Inter-chr q12.1 p13.2 121334 ChimerSeq ChiTaRs ChiTaRs MFAP1-MFAP1 MFAP1 chr15 44098736 MFAP1 chr15 44098725 Exonic hg19 NA BE073952 Out-of-frame Intra-chr q15.3 q15.3 121335 ChimerSeq ChiTaRs ChiTaRs BCAS3-BCAS3 BCAS3 chr17 59378187 BCAS3 chr17 59371368 Exonic hg19 NA CV572932 Out-of-frame Intra-chr q23.2 q23.2 121336 ChimerSeq ChiTaRs ChiTaRs AXL-ZFAND3 AXL chr19 41753946 ZFAND3 chr6 37941656 Exonic hg19 NA CV346482 Out-of-frame Inter-chr q13.2 TK:Axl Oncogene p21.2 121337 ChimerSeq ChiTaRs ChiTaRs FARP1-FARP1 FARP1 chr13 98891484 FARP1 chr13 98943138 Exonic hg19 NA BF769422 Out-of-frame Intra-chr q32.2 q32.2 121338 ChimerSeq ChiTaRs ChiTaRs MALAT1-RPS6 MALAT1 chr11 65266662 RPS6 chr9 19378815 Exonic hg19 NA BF814212 Out-of-frame Inter-chr q13.1 p22.1 121339 ChimerSeq ChiTaRs ChiTaRs PLCB1-GTF2A1 PLCB1 chr20 8189060 GTF2A1 chr14 81686939 Exonic hg19 NA BE835662 Out-of-frame Inter-chr p12.3 q31.1 121340 ChimerSeq ChiTaRs ChiTaRs ZSCAN30-GALNT1 ZSCAN30 chr18 32870216 GALNT1 chr18 33263353 Exonic hg19 NA DA662182 Out-of-frame Intra-chr q12.2 Transcription factor q12.2 121341 ChimerSeq ChiTaRs ChiTaRs KLC1-EFCAB6 KLC1 chr14 104130464 EFCAB6 chr22 44151426 Exonic hg19 NA BI005102 Out-of-frame Inter-chr q32.33 q13.31 121342 ChimerSeq ChiTaRs ChiTaRs RNF6-RNF6 RNF6 chr13 26788481 RNF6 chr13 26787680 Exonic hg19 NA BI822902 Out-of-frame Intra-chr q12.13 q12.13 121343 ChimerSeq ChiTaRs ChiTaRs TRMU-NSMCE2 TRMU chr22 46731485 NSMCE2 chr8 126114651 Exonic hg19 NA AA862462 Out-of-frame Inter-chr q13.31 q24.13 121344 ChimerSeq ChiTaRs ChiTaRs N4BP1-N4BP1 N4BP1 chr16 48595497 N4BP1 chr16 48595568 Exonic hg19 NA AW014162 Out-of-frame Intra-chr q12.1 q12.1 121345 ChimerSeq ChiTaRs ChiTaRs LLGL2-XRCC1 LLGL2 chr17 73565165 XRCC1 chr19 44056353 Exonic hg19 NA BG979482 Out-of-frame Inter-chr q25.1 q13.31 121346 ChimerSeq ChiTaRs ChiTaRs ALDH1A3-ALDH1A3 ALDH1A3 chr15 101456827 ALDH1A3 chr15 101456364 Exonic hg19 NA BU675142 Out-of-frame Intra-chr q26.3 q26.3 121347 ChimerSeq ChiTaRs ChiTaRs SLC39A3-SLC39A3 SLC39A3 chr19 2737288 SLC39A3 chr19 2733340 Exonic hg19 NA BF766582 Out-of-frame Intra-chr p13.3 p13.3 121348 ChimerSeq ChiTaRs ChiTaRs MALAT1-OSBPL6 MALAT1 chr11 65268091 OSBPL6 chr2 179261323 Exonic hg19 NA AA322902 Out-of-frame Inter-chr q13.1 q31.2 121349 ChimerSeq ChiTaRs ChiTaRs PTRF-PTRF PTRF chr17 40555352 PTRF chr17 40554622 Exonic hg19 NA CF126982 Out-of-frame Intra-chr 121350 ChimerSeq ChiTaRs ChiTaRs CHD6-CHD6 CHD6 chr20 40112143 CHD6 chr20 40179953 Exonic hg19 NA AK026022 Out-of-frame Intra-chr q12 q12 121351 ChimerSeq ChiTaRs ChiTaRs MLL-SEPT5-GP1BB MLL chr11 118355217 SEPT5-GP1BB chr22 19707081 Exonic hg19 NA AF061153 Out-of-frame Inter-chr q23.3 121352 ChimerSeq ChiTaRs ChiTaRs COL4A1-COL4A1 COL4A1 chr13 110802192 COL4A1 chr13 110807695 Exonic hg19 NA BP422422 Out-of-frame Intra-chr q34 q34 121353 ChimerSeq ChiTaRs ChiTaRs ZNF814-PIK3CD ZNF814 chr19 58383067 PIK3CD chr1 9772011 Exonic hg19 NA BF926362 Out-of-frame Inter-chr q13.43 Transcription factor p36.22 Oncogene 121354 ChimerSeq ChiTaRs ChiTaRs IQCK-IQCK IQCK chr16 19741818 IQCK chr16 19745024 Exonic hg19 NA BI520472 Out-of-frame Intra-chr p12.3 p12.3 121355 ChimerSeq ChiTaRs ChiTaRs RPAP1-RAD54L RPAP1 chr15 41815238 RAD54L chr1 46743742 Exonic hg19 NA AI335862 Out-of-frame Inter-chr q15.1 p34.1 121356 ChimerSeq ChiTaRs ChiTaRs TMEM205-TMEM205 TMEM205 chr19 11456118 TMEM205 chr19 11453570 Exonic hg19 NA AW276772 Out-of-frame Intra-chr p13.2 p13.2 121357 ChimerSeq ChiTaRs ChiTaRs MAML2-MLL MAML2 chr11 95825055 MLL chr11 118359129 Exonic hg19 NA DQ084492 Out-of-frame Intra-chr q21 Oncogene q23.3 121358 ChimerSeq ChiTaRs ChiTaRs TMPRSS2-MALAT1 TMPRSS2 chr21 42876638 MALAT1 chr11 65266549 Exonic hg19 NA BE974112 Out-of-frame Inter-chr q22.3 q13.1 121359 ChimerSeq ChiTaRs ChiTaRs PTTG1IP-PTTG1IP PTTG1IP chr21 46270032 PTTG1IP chr21 46270095 Exonic hg19 NA BU677262 Out-of-frame Intra-chr q22.3 q22.3 121360 ChimerSeq ChiTaRs ChiTaRs ACP5-PSAP ACP5 chr19 11688133 PSAP chr10 73587814 Exonic hg19 NA AW608472 Out-of-frame Inter-chr p13.2 q22.1 121361 ChimerSeq ChiTaRs ChiTaRs PXN-RPL38 PXN chr12 120655460 RPL38 chr17 72205394 Exonic hg19 NA AA034452 Out-of-frame Inter-chr q24.23 q25.1 121362 ChimerSeq ChiTaRs ChiTaRs SUPT5H-CTSB SUPT5H chr19 39959491 CTSB chr8 11701700 Exonic hg19 NA BF754892 Out-of-frame Inter-chr q13.2 p23.1 121363 ChimerSeq ChiTaRs ChiTaRs CHST11-FARP1 CHST11 chr12 104956311 FARP1 chr13 99101721 Exonic hg19 NA BF926212 Out-of-frame Inter-chr q23.3 q32.2 121364 ChimerSeq ChiTaRs ChiTaRs RCBTB1-RCBTB1 RCBTB1 chr13 50106802 RCBTB1 chr13 50106819 Exonic hg19 NA AA228682 Out-of-frame Intra-chr q14.2 q14.2 121365 ChimerSeq ChiTaRs ChiTaRs RCN3-LOC100288637 RCN3 chr19 50046507 LOC100288637 chr15 31015737 Exonic hg19 NA AA367502 Out-of-frame Inter-chr q13.33 121366 ChimerSeq ChiTaRs ChiTaRs ZNF609-ZNF609 ZNF609 chr15 64978145 ZNF609 chr15 64978144 Exonic hg19 NA BG105862 Out-of-frame Intra-chr q22.31 Transcription factor q22.31 Transcription factor 121367 ChimerSeq ChiTaRs ChiTaRs AES-MPHOSPH10 AES chr19 3053265 MPHOSPH10 chr2 71362676 Exonic hg19 NA BQ371512 Out-of-frame Inter-chr p13.3 p13.3 121368 ChimerSeq ChiTaRs ChiTaRs CRLS1-TEX9 CRLS1 chr20 6009972 TEX9 chr15 56721007 Exonic hg19 NA AK129562 Out-of-frame Inter-chr p12.3 q21.3 121369 ChimerSeq ChiTaRs ChiTaRs INTS4-TXLNG INTS4 chr11 77690489 TXLNG chrX 16853909 Exonic hg19 NA BU732522 Out-of-frame Inter-chr q14.1 p22.2 121370 ChimerSeq ChiTaRs ChiTaRs BMP7-HOOK3 BMP7 chr20 55791262 HOOK3 chr8 42879346 Exonic hg19 NA BF919052 Out-of-frame Inter-chr q13.31 p11.21 Oncogene 121371 ChimerSeq ChiTaRs ChiTaRs ARSA-ARSA ARSA chr22 51065319 ARSA chr22 51064666 Exonic hg19 NA BF932162 Out-of-frame Intra-chr q13.33 q13.33 121372 ChimerSeq ChiTaRs ChiTaRs CES2-CES2 CES2 chr16 66978540 CES2 chr16 66976615 Exonic hg19 NA CA427622 Out-of-frame Intra-chr q22.1 q22.1 121373 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65268122 MALAT1 chr11 65267747 Exonic hg19 NA AW996942 Out-of-frame Intra-chr q13.1 q13.1 121374 ChimerSeq ChiTaRs ChiTaRs THRA-USP5 THRA chr17 38249272 USP5 chr12 6975693 Exonic hg19 NA CN414562 CDS-3'UTR Inter-chr q21.1 Tumor suppressor gene Transcription factor p13.31 121375 ChimerSeq ChiTaRs ChiTaRs MYO18A-ABCC1 MYO18A chr17 27441993 ABCC1 chr16 16235308 Exonic hg19 NA BF827842 Out-of-frame Inter-chr q11.2 Oncogene 121376 ChimerSeq ChiTaRs ChiTaRs XBP1-XBP1 XBP1 chr22 29192100 XBP1 chr22 29190572 Exonic hg19 NA AW956952 Out-of-frame Intra-chr q12.1 Transcription factor q12.1 Transcription factor 121377 ChimerSeq ChiTaRs ChiTaRs TCTN2-TMEM62 TCTN2 chr12 124192932 TMEM62 chr15 43446923 Exonic hg19 NA AW013912 Out-of-frame Inter-chr q24.31 q15.2 121378 ChimerSeq ChiTaRs ChiTaRs XPOT-XPOT XPOT chr12 64833096 XPOT chr12 64842127 Exonic hg19 NA BF087922 Out-of-frame Intra-chr q14.2 q14.2 121379 ChimerSeq ChiTaRs ChiTaRs C17orf76-AS1-DENND5B C17orf76-AS1 chr17 16342732 DENND5B chr12 31536734 Exonic hg19 NA DA537572 Out-of-frame Inter-chr p11.21 Tumor suppressor gene 121380 ChimerSeq ChiTaRs ChiTaRs PSEN1-POFUT1 PSEN1 chr14 73640298 POFUT1 chr20 30823405 Exonic hg19 NA AW374362 Out-of-frame Inter-chr q24.2 q11.21 121381 ChimerSeq ChiTaRs ChiTaRs LLPH-KAT2B LLPH chr12 66531902 KAT2B chr3 20168973 Exonic hg19 NA AI083552 Out-of-frame Inter-chr q14.3 p24.3 121382 ChimerSeq ChiTaRs ChiTaRs MAN2B1-NDUFB11 MAN2B1 chr19 12763280 NDUFB11 chrX 47001615 Exonic hg19 NA BC007362 Out-of-frame Inter-chr p13.13 p11.3 121383 ChimerSeq ChiTaRs ChiTaRs CYTH2-CYTH2 CYTH2 chr19 48982630 CYTH2 chr19 48981579 Exonic hg19 NA BE218792 Out-of-frame Intra-chr q13.33 q13.33 121384 ChimerSeq ChiTaRs ChiTaRs ECH1-ECH1 ECH1 chr19 39306170 ECH1 chr19 39306331 Exonic hg19 NA BF911172 Out-of-frame Intra-chr 121385 ChimerSeq ChiTaRs ChiTaRs DIXDC1-DIXDC1 DIXDC1 chr11 111893312 DIXDC1 chr11 111892908 Exonic hg19 NA AA633772 Out-of-frame Intra-chr q23.1 q23.1 121386 ChimerSeq ChiTaRs ChiTaRs GGT1-CARS2 GGT1 chr22 24981689 CARS2 chr13 111353839 Exonic hg19 NA AW182722 Out-of-frame Inter-chr q11.23 q34 121387 ChimerSeq ChiTaRs ChiTaRs MAML2-MAML2 MAML2 chr11 95893338 MAML2 chr11 95861445 Exonic hg19 NA BG003252 Out-of-frame Intra-chr q21 Oncogene q21 Oncogene 121388 ChimerSeq ChiTaRs ChiTaRs GGNBP2-GGNBP2 GGNBP2 chr17 34937881 GGNBP2 chr17 34935710 Exonic hg19 NA BU674652 Out-of-frame Intra-chr Tumor suppressor gene Tumor suppressor gene 121389 ChimerSeq ChiTaRs ChiTaRs FLOT2-FLOT2 FLOT2 chr17 27209048 FLOT2 chr17 27207338 Exonic hg19 NA AW794342 Out-of-frame Intra-chr q11.2 q11.2 121390 ChimerSeq ChiTaRs ChiTaRs TPM1-TPM1 TPM1 chr15 63363462 TPM1 chr15 63363447 Exonic hg19 NA CN274732 Out-of-frame Intra-chr q22.2 q22.2 121391 ChimerSeq ChiTaRs ChiTaRs SERPINA1-RPL23 SERPINA1 chr14 94844909 RPL23 chr17 37006649 Exonic hg19 NA CB138512 Out-of-frame Inter-chr q32.13 q12 121392 ChimerSeq ChiTaRs ChiTaRs NPAS3-NPAS3 NPAS3 chr14 34256010 NPAS3 chr14 34255723 Exonic hg19 NA AA525162 Out-of-frame Intra-chr q13.1 Transcription factor q13.1 Transcription factor 121393 ChimerSeq ChiTaRs ChiTaRs SMARCD2-FLNA SMARCD2 chr17 61909742 FLNA chrX 153577135 Exonic hg19 NA AI983892 Out-of-frame Inter-chr q23.3 q28 Tumor suppressor gene 121394 ChimerSeq ChiTaRs ChiTaRs RAB37-PDE4D RAB37 chr17 72700988 PDE4D chr5 58351301 Exonic hg19 NA BI019872 Out-of-frame Inter-chr q25.1 q12.1 121395 ChimerSeq ChiTaRs ChiTaRs ANKS1B-TGFBI ANKS1B chr12 100222895 TGFBI chr5 135382992 Exonic hg19 NA BM994942 Out-of-frame Inter-chr q23.1 q31.1 Tumor suppressor gene 121396 ChimerSeq ChiTaRs ChiTaRs COL1A1-COL1A1 COL1A1 chr17 48262140 COL1A1 chr17 48262182 Exonic hg19 NA AI073852 Out-of-frame Intra-chr q21.33 Oncogene q21.33 Oncogene 121397 ChimerSeq ChiTaRs ChiTaRs RPS21-LRBA RPS21 chr20 60963573 LRBA chr4 151616176 Exonic hg19 NA BP251502 Out-of-frame Inter-chr q13.33 q31.3 121398 ChimerSeq ChiTaRs ChiTaRs DNAJC22-DNAJC22 DNAJC22 chr12 49745182 DNAJC22 chr12 49744817 Exonic hg19 NA BG978182 Out-of-frame Intra-chr q13.12 q13.12 121399 ChimerSeq ChiTaRs ChiTaRs IDH3B-JUP IDH3B chr20 2644189 JUP chr17 39740115 Exonic hg19 NA BG991562 Out-of-frame Inter-chr p13 q21.2 Tumor suppressor gene 121400 ChimerSeq ChiTaRs ChiTaRs PFN1-NAGK PFN1 chr17 4849349 NAGK chr2 71305764 Exonic hg19 NA BQ334962 Out-of-frame Inter-chr p13.2 Tumor suppressor gene p13.3 121401 ChimerSeq ChiTaRs ChiTaRs SON-KLF6 SON chr21 34922039 KLF6 chr10 3821054 Exonic hg19 NA BE719002 Out-of-frame Inter-chr q22.11 Transcription factor p15.2 Oncogene Tumor suppressor gene Transcription factor 121402 ChimerSeq ChiTaRs ChiTaRs PCIF1-NEAT1 PCIF1 chr20 44576658 NEAT1 chr11 65192323 Exonic hg19 NA AA534942 Out-of-frame Inter-chr q13.12 q13.1 121403 ChimerSeq ChiTaRs ChiTaRs UNC93B1-MPHOSPH8 UNC93B1 chr11 67764221 MPHOSPH8 chr13 20207791 Exonic hg19 NA BF920672 Out-of-frame Inter-chr q13.2 q12.11 121404 ChimerSeq ChiTaRs ChiTaRs TSPAN31-DNASE1 TSPAN31 chr12 58142025 DNASE1 chr16 3703387 Exonic hg19 NA AA971692 Out-of-frame Inter-chr q14.1 p13.3 121405 ChimerSeq ChiTaRs ChiTaRs AKAP13-IQCG AKAP13 chr15 86225438 IQCG chr3 197678052 Exonic hg19 NA BF852302 Out-of-frame Inter-chr q25.3 q29 121406 ChimerSeq ChiTaRs ChiTaRs TIAM1-TIAM1 TIAM1 chr21 32709910 TIAM1 chr21 32708135 Exonic hg19 NA BC128062 Out-of-frame Intra-chr q22.11 q22.11 121407 ChimerSeq ChiTaRs ChiTaRs MSL1-PPP3CA MSL1 chr17 38291327 PPP3CA chr4 101946647 Exonic hg19 NA BE896062 Out-of-frame Inter-chr q21.1 q24 121408 ChimerSeq ChiTaRs ChiTaRs MICAL3-MICAL3 MICAL3 chr22 18347706 MICAL3 chr22 18374369 Exonic hg19 NA BE141862 Out-of-frame Intra-chr q11.21 q11.21 121409 ChimerSeq ChiTaRs ChiTaRs ZNF532-ZNF532 ZNF532 chr18 56570219 ZNF532 chr18 56569936 Exonic hg19 NA AA744412 Out-of-frame Intra-chr q21.32 Transcription factor q21.32 Transcription factor 121410 ChimerSeq ChiTaRs ChiTaRs SAP18-USP54 SAP18 chr13 21721351 USP54 chr10 75310364 Exonic hg19 NA BI041482 Out-of-frame Inter-chr q12.11 q22.2 121411 ChimerSeq ChiTaRs ChiTaRs SLC38A6-HNRNPAB SLC38A6 chr14 61465840 HNRNPAB chr5 177637601 Exonic hg19 NA BQ318532 Out-of-frame Inter-chr q23.1 q35.3 121412 ChimerSeq ChiTaRs ChiTaRs ACTN1-ACTN1 ACTN1 chr14 69341703 ACTN1 chr14 69345731 Exonic hg19 NA BM555422 Out-of-frame Intra-chr q24.1 q24.1 121413 ChimerSeq ChiTaRs ChiTaRs HMG20A-RBM39 HMG20A chr15 77777945 RBM39 chr20 34297701 Exonic hg19 NA BU689572 3'UTR-3'UTR Inter-chr q24.3 Transcription factor q11.22 121414 ChimerSeq ChiTaRs ChiTaRs POU2F2-POU2F2 POU2F2 chr19 42594457 POU2F2 chr19 42593705 Exonic hg19 NA AI657122 Out-of-frame Intra-chr q13.2 Transcription factor q13.2 Transcription factor 121415 ChimerSeq ChiTaRs ChiTaRs CACNA1I-ZNF462 CACNA1I chr22 40085201 ZNF462 chr9 109677900 Exonic hg19 NA BG995152 Out-of-frame Inter-chr q13.1 q31.2 Transcription factor 121416 ChimerSeq ChiTaRs ChiTaRs ARHGEF7-TUSC3 ARHGEF7 chr13 111956281 TUSC3 chr8 15397987 Exonic hg19 NA BF990912 Out-of-frame Inter-chr q34 p22 121417 ChimerSeq ChiTaRs ChiTaRs KDM4B-KDM4B KDM4B chr19 5131159 KDM4B chr19 5131229 Exonic hg19 NA AL133622 Out-of-frame Intra-chr p13.3 p13.3 121418 ChimerSeq ChiTaRs ChiTaRs TAX1BP3-INO80D TAX1BP3 chr17 3567165 INO80D chr2 206920983 Exonic hg19 NA BI004512 Out-of-frame Inter-chr p13.2 121419 ChimerSeq ChiTaRs ChiTaRs FURIN-PCNXL3 FURIN chr15 91426688 PCNXL3 chr11 65402442 Exonic hg19 NA AI418492 Out-of-frame Inter-chr q26.1 121420 ChimerSeq ChiTaRs ChiTaRs SMAD3-SMAD3 SMAD3 chr15 67403023 SMAD3 chr15 67399173 Exonic hg19 NA AK129712 Out-of-frame Intra-chr q22.33 Transcription factor q22.33 Transcription factor 121421 ChimerSeq ChiTaRs ChiTaRs RNF10-RNF10 RNF10 chr12 121009093 RNF10 chr12 120995435 Exonic hg19 NA CN362232 Out-of-frame Intra-chr q24.31 q24.31 121422 ChimerSeq ChiTaRs ChiTaRs RORA-BAI3 RORA chr15 61343701 BAI3 chr6 69352808 Exonic hg19 NA CV392982 Out-of-frame Inter-chr q22.2 Transcription factor 121423 ChimerSeq ChiTaRs ChiTaRs CD97-ATP2A2 CD97 chr19 14519535 ATP2A2 chr12 110784457 Exonic hg19 NA BM979072 Out-of-frame Inter-chr q24.11 121424 ChimerSeq ChiTaRs ChiTaRs SYT1-ATXN1 SYT1 chr12 79470439 ATXN1 chr6 16562102 Exonic hg19 NA AW875082 Out-of-frame Inter-chr q21.2 p22.3 121425 ChimerSeq ChiTaRs ChiTaRs CCDC53-C19orf48 CCDC53 chr12 102455797 C19orf48 chr19 51301969 Exonic hg19 NA BF921302 Out-of-frame Inter-chr q13.33 121426 ChimerSeq ChiTaRs ChiTaRs ZNF415-ZNF415 ZNF415 chr19 53612900 ZNF415 chr19 53612840 Exonic hg19 NA AI016112 Out-of-frame Intra-chr q13.42 Transcription factor q13.42 Transcription factor 121427 ChimerSeq ChiTaRs ChiTaRs TBXA2R-GIT2 TBXA2R chr19 3594728 GIT2 chr12 110401604 Exonic hg19 NA AA908882 Out-of-frame Inter-chr p13.3 q24.11 121428 ChimerSeq ChiTaRs ChiTaRs ABHD2-ABHD2 ABHD2 chr15 89635873 ABHD2 chr15 89639156 Exonic hg19 NA AW853202 Out-of-frame Intra-chr q26.1 q26.1 121429 ChimerSeq ChiTaRs ChiTaRs PACS2-PACS2 PACS2 chr14 105859115 PACS2 chr14 105858957 Exonic hg19 NA BE409412 Out-of-frame Intra-chr q32.33 q32.33 121430 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65267539 MALAT1 chr11 65267186 Exonic hg19 NA BG564122 Out-of-frame Intra-chr q13.1 q13.1 121431 ChimerSeq ChiTaRs ChiTaRs ZC3H14-ZC3H14 ZC3H14 chr14 89078211 ZC3H14 chr14 89068379 Exonic hg19 NA BU616552 Out-of-frame Intra-chr q31.3 q31.3 121432 ChimerSeq ChiTaRs ChiTaRs TNPO2-TNPO2 TNPO2 chr19 12818205 TNPO2 chr19 12819327 Exonic hg19 NA BI026612 Out-of-frame Intra-chr p13.13 p13.13 121433 ChimerSeq ChiTaRs ChiTaRs ITGA11-ITGA11 ITGA11 chr15 68653975 ITGA11 chr15 68643076 Exonic hg19 NA BG013602 Out-of-frame Intra-chr q23 q23 121434 ChimerSeq ChiTaRs ChiTaRs INSR-SEPT6 INSR chr19 7153117 2006_ 9_ 1_ chrX 118755237 Exonic hg19 NA AW897982 Out-of-frame Inter-chr p13.2 TK:InsR 121435 ChimerSeq ChiTaRs ChiTaRs OAS1-CYR61 OAS1 chr12 113355570 CYR61 chr1 86047866 Exonic hg19 NA AW889412 Out-of-frame Inter-chr q24.13 p22.3 121436 ChimerSeq ChiTaRs ChiTaRs RNF185-STEAP2 RNF185 chr22 31602999 STEAP2 chr7 89862595 Exonic hg19 NA AA772562 Out-of-frame Inter-chr q12.2 q21.13 121437 ChimerSeq ChiTaRs ChiTaRs TRPC4-TRPC4 TRPC4 chr13 38443939 TRPC4 chr13 38211002 Exonic hg19 NA AF063822 5'UTR-CDS Intra-chr q13.3 q13.3 121438 ChimerSeq ChiTaRs ChiTaRs WWP2-TCIRG1 WWP2 chr16 69965373 TCIRG1 chr11 67812423 Exonic hg19 NA BE828372 Out-of-frame Inter-chr q22.1 q13.2 121439 ChimerSeq ChiTaRs ChiTaRs LGALS1-MAGED1 LGALS1 chr22 38075809 MAGED1 chrX 51546181 Exonic hg19 NA BU859182 3'UTR-5'UTR Inter-chr q13.1 p11.22 121440 ChimerSeq ChiTaRs ChiTaRs PVRL1-PRKCD PVRL1 chr11 119535640 PRKCD chr3 53222814 Exonic hg19 NA BG982322 Out-of-frame Inter-chr p21.1 Tumor suppressor gene 121441 ChimerSeq ChiTaRs ChiTaRs ITGB3-INADL ITGB3 chr17 45389761 INADL chr1 62617829 Exonic hg19 NA AU116912 Out-of-frame Inter-chr q21.32 Oncogene Tumor suppressor gene 121442 ChimerSeq ChiTaRs ChiTaRs IL4I1-KCTD2 IL4I1 chr19 50432562 KCTD2 chr17 73028714 Exonic hg19 NA CD102882 Out-of-frame Inter-chr q13.33 q25.1 121443 ChimerSeq ChiTaRs ChiTaRs MED13L-PTPN23 MED13L chr12 116667232 PTPN23 chr3 47439467 Exonic hg19 NA BF357082 Out-of-frame Inter-chr q24.21 p21.31 Tumor suppressor gene 121444 ChimerSeq ChiTaRs ChiTaRs KIF1C-GNAI3 KIF1C chr17 4923835 GNAI3 chr1 110134675 Exonic hg19 NA AW897822 Out-of-frame Inter-chr p13.2 p13.3 121445 ChimerSeq ChiTaRs ChiTaRs RTN1-DLL1 RTN1 chr14 60063163 DLL1 chr6 170591301 Exonic hg19 NA AF003522 Out-of-frame Inter-chr q23.1 121446 ChimerSeq ChiTaRs ChiTaRs RPL18-EGR3 RPL18 chr19 49118665 EGR3 chr8 22545239 Exonic hg19 NA D57272 Out-of-frame Inter-chr q13.33 p21.3 Transcription factor 121447 ChimerSeq ChiTaRs ChiTaRs DIDO1-DIDO1 DIDO1 chr20 61535565 DIDO1 chr20 61535585 Exonic hg19 NA AA190742 Out-of-frame Intra-chr q13.33 Tumor suppressor gene q13.33 Tumor suppressor gene 121448 ChimerSeq ChiTaRs ChiTaRs RPS27L-KIAA1432 RPS27L chr15 63449641 KIAA1432 chr9 5772947 Exonic hg19 NA AI493202 Out-of-frame Inter-chr q22.2 121449 ChimerSeq ChiTaRs ChiTaRs C19orf66-C19orf66 C19orf66 chr19 10203919 C19orf66 chr19 10203355 Exonic hg19 NA AI971032 Out-of-frame Intra-chr p13.2 p13.2 121450 ChimerSeq ChiTaRs ChiTaRs GATM-DDX3X GATM chr15 45656463 DDX3X chrX 41197147 Exonic hg19 NA BF933512 Out-of-frame Inter-chr q21.1 p11.4 Tumor suppressor gene 121451 ChimerSeq ChiTaRs ChiTaRs COTL1-METTL7A COTL1 chr16 84599283 METTL7A chr12 51326026 Exonic hg19 NA AW889822 Out-of-frame Inter-chr q24.1 q13.12 121452 ChimerSeq ChiTaRs ChiTaRs OLFM4-OLFM4 OLFM4 chr13 53625681 OLFM4 chr13 53625225 Exonic hg19 NA AW934842 Out-of-frame Intra-chr q14.3 Tumor suppressor gene q14.3 Tumor suppressor gene 121453 ChimerSeq ChiTaRs ChiTaRs GNAS-GNAS GNAS chr20 57476593 GNAS chr20 57475136 Exonic hg19 NA BF354702 Out-of-frame Intra-chr q13.32 Oncogene q13.32 Oncogene 121454 ChimerSeq ChiTaRs ChiTaRs SLC24A5-SLC24A5 SLC24A5 chr15 48434294 SLC24A5 chr15 48434438 Exonic hg19 NA BU674082 Out-of-frame Intra-chr q21.1 q21.1 121455 ChimerSeq ChiTaRs ChiTaRs PRPF8-RTF1 PRPF8 chr17 1564320 RTF1 chr15 41767899 Exonic hg19 NA BI037412 Out-of-frame Inter-chr q15.1 121456 ChimerSeq ChiTaRs ChiTaRs ATP11A-ATP11A ATP11A chr13 113446050 ATP11A chr13 113446093 Exonic hg19 NA AA825862 Out-of-frame Intra-chr q34 q34 121457 ChimerSeq ChiTaRs ChiTaRs NFAT5-NFAT5 NFAT5 chr16 69723999 NFAT5 chr16 69725824 Exonic hg19 NA AA700302 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Transcription factor 121458 ChimerSeq ChiTaRs ChiTaRs UNKL-UNKL UNKL chr16 1414672 UNKL chr16 1414328 Exonic hg19 NA AI751242 Out-of-frame Intra-chr p13.3 p13.3 121459 ChimerSeq ChiTaRs ChiTaRs MAP3K14-WAC MAP3K14 chr17 43347203 WAC chr10 28846265 Exonic hg19 NA CN479132 Out-of-frame Inter-chr q21.31 p12.1 121460 ChimerSeq ChiTaRs ChiTaRs TMEM87A-TMEM87A TMEM87A chr15 42503412 TMEM87A chr15 42503016 Exonic hg19 NA BQ774122 Out-of-frame Intra-chr q15.1 q15.1 121461 ChimerSeq ChiTaRs ChiTaRs ABCC3-DLGAP2 ABCC3 chr17 48761501 DLGAP2 chr8 1456800 Exonic hg19 NA BQ302632 Out-of-frame Inter-chr q21.33 p23.3 121462 ChimerSeq ChiTaRs ChiTaRs KDM2A-KDM2A KDM2A chr11 66887520 KDM2A chr11 66947667 Exonic hg19 NA BE089222 5'UTR-5'UTR Intra-chr q13.2 Transcription factor q13.2 Transcription factor 121463 ChimerSeq ChiTaRs ChiTaRs CRAMP1L-CRAMP1L CRAMP1L chr16 1705215 CRAMP1L chr16 1712610 Exonic hg19 NA AI560952 Out-of-frame Intra-chr 121464 ChimerSeq ChiTaRs ChiTaRs AP2B1-ACAP2 AP2B1 chr17 34008308 ACAP2 chr3 195059318 Exonic hg19 NA BM978892 Out-of-frame Inter-chr q12 q29 121465 ChimerSeq ChiTaRs ChiTaRs SYNRG-SYNRG SYNRG chr17 35877063 SYNRG chr17 35875852 Exonic hg19 NA AI863262 Out-of-frame Intra-chr 121466 ChimerSeq ChiTaRs ChiTaRs POLDIP3-POLDIP3 POLDIP3 chr22 42981916 POLDIP3 chr22 42981509 Exonic hg19 NA AI348542 Out-of-frame Intra-chr q13.2 q13.2 121467 ChimerSeq ChiTaRs ChiTaRs LCP1-SLC43A1 LCP1 chr13 46700167 SLC43A1 chr11 57256130 Exonic hg19 NA AI283572 Out-of-frame Inter-chr q14.13 q12.1 121468 ChimerSeq ChiTaRs ChiTaRs PVRL2-ADAMTS12 PVRL2 chr19 45382198 ADAMTS12 chr5 33595567 Exonic hg19 NA AI039262 3'UTR-CDS Inter-chr p13.2 121469 ChimerSeq ChiTaRs ChiTaRs ZACN-LSM3 ZACN chr17 74077952 LSM3 chr3 14220341 Exonic hg19 NA BG034592 Out-of-frame Inter-chr q25.1 p25.1 121470 ChimerSeq ChiTaRs ChiTaRs LZTR1-LZTR1 LZTR1 chr22 21351593 LZTR1 chr22 21345953 Exonic hg19 NA BM856302 Out-of-frame Intra-chr q11.21 q11.21 121471 ChimerSeq ChiTaRs ChiTaRs NEAT1-PRKCZ NEAT1 chr11 65190525 PRKCZ chr1 2080287 Exonic hg19 NA BF989082 Out-of-frame Inter-chr q13.1 p36.33 121472 ChimerSeq ChiTaRs ChiTaRs SELPLG-SELPLG SELPLG chr12 109018046 SELPLG chr12 109016915 Exonic hg19 NA BF510422 Out-of-frame Intra-chr q24.11 q24.11 121473 ChimerSeq ChiTaRs ChiTaRs APLP2-APLP2 APLP2 chr11 130014265 APLP2 chr11 130014332 Exonic hg19 NA AI985022 Out-of-frame Intra-chr q24.3 q24.3 121474 ChimerSeq ChiTaRs ChiTaRs ARFRP1-ODF2 ARFRP1 chr20 62338016 ODF2 chr9 131233661 Exonic hg19 NA BI012132 Out-of-frame Inter-chr q13.33 q34.11 121475 ChimerSeq ChiTaRs ChiTaRs LTA4H-RPLP2 LTA4H chr12 96396821 RPLP2 chr11 810308 Exonic hg19 NA BQ335002 Out-of-frame Inter-chr q23.1 p15.5 121476 ChimerSeq ChiTaRs ChiTaRs CRYAB-UNKL CRYAB chr11 111782492 UNKL chr16 1416058 Exonic hg19 NA BI041332 Out-of-frame Inter-chr q23.1 p13.3 121477 ChimerSeq ChiTaRs ChiTaRs NEMF-GNB5 NEMF chr14 50300246 GNB5 chr15 52414427 Exonic hg19 NA BQ338732 Out-of-frame Inter-chr q21.3 q21.2 121478 ChimerSeq ChiTaRs ChiTaRs GNAS-STK38L GNAS chr20 57472298 STK38L chr12 27397078 Exonic hg19 NA AB023182 Out-of-frame Inter-chr q13.32 Oncogene p11.23 121479 ChimerSeq ChiTaRs ChiTaRs KSR2-SPOCK1 KSR2 chr12 118125413 SPOCK1 chr5 136798392 Exonic hg19 NA BF947472 Out-of-frame Inter-chr q24.23 TKL:RAF q31.2 121480 ChimerSeq ChiTaRs ChiTaRs SEH1L-SEH1L SEH1L chr18 12987531 SEH1L chr18 12987229 Exonic hg19 NA AA559852 Out-of-frame Intra-chr p11.21 p11.21 121481 ChimerSeq ChiTaRs ChiTaRs NEO1-NEO1 NEO1 chr15 73528707 NEO1 chr15 73415005 Exonic hg19 NA AA578152 Out-of-frame Intra-chr q24.1 q24.1 121482 ChimerSeq ChiTaRs ChiTaRs LOC284454-FAM63B LOC284454 chr19 13945832 FAM63B chr15 59147044 Exonic hg19 NA BQ017332 Out-of-frame Inter-chr 121483 ChimerSeq ChiTaRs ChiTaRs RPRD1A-ABI3BP RPRD1A chr18 33571170 ABI3BP chr3 100636267 Exonic hg19 NA AL118752 Out-of-frame Inter-chr q12.2 q12.2 121484 ChimerSeq ChiTaRs ChiTaRs UBE2V1-UBE2V1 UBE2V1 chr20 48710193 UBE2V1 chr20 48709820 Exonic hg19 NA AW807842 Out-of-frame Intra-chr q13.13 q13.13 121485 ChimerSeq ChiTaRs ChiTaRs ZBTB16-ZBTB16 ZBTB16 chr11 113944095 ZBTB16 chr11 113945197 Exonic hg19 NA BF510182 Out-of-frame Intra-chr q23.2 Tumor suppressor gene Transcription factor q23.2 Tumor suppressor gene Transcription factor 121486 ChimerSeq ChiTaRs ChiTaRs YY1-TUBB2A YY1 chr14 100744074 TUBB2A chr6 3155860 Exonic hg19 NA BQ277692 Out-of-frame Inter-chr q32.2 Transcription factor p25.2 121487 ChimerSeq ChiTaRs ChiTaRs DCLK1-KTN1 DCLK1 chr13 36659984 KTN1 chr14 56103174 Exonic hg19 NA BE836712 Out-of-frame Inter-chr q13.3 CAMK:DCAMKL q22.3 121488 ChimerSeq ChiTaRs ChiTaRs CFDP1-CFDP1 CFDP1 chr16 75344025 CFDP1 chr16 75348286 Exonic hg19 NA AW936522 Out-of-frame Intra-chr q23.1 q23.1 121489 ChimerSeq ChiTaRs ChiTaRs FXYD6-FXYD2-FXYD6-FXYD2 FXYD6-FXYD2 chr11 117707688 FXYD6-FXYD2 chr11 117708359 Exonic hg19 NA BQ346112 Out-of-frame Intra-chr q23.3 q23.3 121490 ChimerSeq ChiTaRs ChiTaRs PSMA7-UBA52 PSMA7 chr20 60711972 UBA52 chr19 18682669 Exonic hg19 NA AA581992 Out-of-frame Inter-chr q13.33 p13.11 121491 ChimerSeq ChiTaRs ChiTaRs ATF7IP-MALAT1 ATF7IP chr12 14527806 MALAT1 chr11 65268194 Exonic hg19 NA AW866982 Out-of-frame Inter-chr p13.1 q13.1 121492 ChimerSeq ChiTaRs ChiTaRs BCL2L1-SORT1 BCL2L1 chr20 30252359 SORT1 chr1 109852288 Exonic hg19 NA AI128252 Out-of-frame Inter-chr q11.21 Oncogene p13.3 121493 ChimerSeq ChiTaRs ChiTaRs UFD1L-REST UFD1L chr22 19450787 REST chr4 57796225 Exonic hg19 NA BE813472 Out-of-frame Inter-chr q12 Transcription factor 121494 ChimerSeq ChiTaRs ChiTaRs ZNF761-TBC1D4 ZNF761 chr19 53948691 TBC1D4 chr13 75866123 Exonic hg19 NA CB218472 Out-of-frame Inter-chr q13.42 Transcription factor q22.2 121495 ChimerSeq ChiTaRs ChiTaRs RPL13A-ARL6IP5 RPL13A chr19 49993526 ARL6IP5 chr3 69153989 Exonic hg19 NA BM723492 Out-of-frame Inter-chr q13.33 p14.1 Tumor suppressor gene 121496 ChimerSeq ChiTaRs ChiTaRs NCAM2-ILF2 NCAM2 chr21 22827553 ILF2 chr1 153634510 Exonic hg19 NA AF113702 Out-of-frame Inter-chr q21.1 Tumor suppressor gene q21.3 121497 ChimerSeq ChiTaRs ChiTaRs RAP1B-HUWE1 RAP1B chr12 69020632 HUWE1 chrX 53565825 Exonic hg19 NA CA428502 Out-of-frame Inter-chr q15 p11.22 121498 ChimerSeq ChiTaRs ChiTaRs EBF4-EBF4 EBF4 chr20 2735968 EBF4 chr20 2735958 Exonic hg19 NA BF762042 Out-of-frame Intra-chr p13 Transcription factor p13 Transcription factor 121499 ChimerSeq ChiTaRs ChiTaRs MUC16-MUC16 MUC16 chr19 9001879 MUC16 chr19 8999456 Exonic hg19 NA AA640762 Out-of-frame Intra-chr p13.2 p13.2 121500 ChimerSeq ChiTaRs ChiTaRs UBE2V1-DHTKD1 UBE2V1 chr20 48698608 DHTKD1 chr10 12164419 Exonic hg19 NA CB134342 Out-of-frame Inter-chr q13.13 p14 121501 ChimerSeq ChiTaRs ChiTaRs PI4KA-GBP3 PI4KA chr22 21161747 GBP3 chr1 89477427 Exonic hg19 NA BE006742 Out-of-frame Inter-chr q11.21 p22.2 121502 ChimerSeq ChiTaRs ChiTaRs HIP1R-HIP1R HIP1R chr12 123338467 HIP1R chr12 123320019 Exonic hg19 NA AK130532 Out-of-frame Intra-chr q24.31 q24.31 121503 ChimerSeq ChiTaRs ChiTaRs USP32-UBN2 USP32 chr17 58319851 UBN2 chr7 138965179 Exonic hg19 NA AA011412 Out-of-frame Inter-chr q23.2 q34 121504 ChimerSeq ChiTaRs ChiTaRs RAI1-JAZF1 RAI1 chr17 17701102 JAZF1 chr7 27871182 Exonic hg19 NA AI547182 Out-of-frame Inter-chr p11.2 p15.1 Transcription factor 121505 ChimerSeq ChiTaRs ChiTaRs DNAJC15-MAX DNAJC15 chr13 43681439 MAX chr14 65542263 Exonic hg19 NA BU674262 Out-of-frame Inter-chr q14.11 q23.3 Oncogene Tumor suppressor gene Transcription factor 121506 ChimerSeq ChiTaRs ChiTaRs NXN-INO80 NXN chr17 839155 INO80 chr15 41342214 Exonic hg19 NA BE931342 Out-of-frame Inter-chr p13.3 q15.1 121507 ChimerSeq ChiTaRs ChiTaRs DLG2-DLG2 DLG2 chr11 83810073 DLG2 chr11 83177778 Exonic hg19 NA BF369902 Out-of-frame Intra-chr q14.1 q14.1 121508 ChimerSeq ChiTaRs ChiTaRs OPCML-MIR5095 OPCML chr11 132542973 MIR5095 chr20 55948608 Exonic hg19 NA BF856072 Out-of-frame Inter-chr q25 Tumor suppressor gene p32.3 121509 ChimerSeq ChiTaRs ChiTaRs C19orf43-AP5Z1 C19orf43 chr19 12841512 AP5Z1 chr7 4831298 Exonic hg19 NA BG925002 Out-of-frame Inter-chr p13.13 p22.1 121510 ChimerSeq ChiTaRs ChiTaRs CLIP1-SPIN3 CLIP1 chr12 122837127 SPIN3 chrX 57007415 Exonic hg19 NA AA324222 Out-of-frame Inter-chr q24.31 p11.21 121511 ChimerSeq ChiTaRs ChiTaRs CNN2-FBXO15 CNN2 chr19 1039062 FBXO15 chr18 71813133 Exonic hg19 NA AA906172 Out-of-frame Inter-chr p13.3 q22.3 121512 ChimerSeq ChiTaRs ChiTaRs KRT4-KRT4 KRT4 chr12 53200576 KRT4 chr12 53200609 Exonic hg19 NA BF592632 Out-of-frame Intra-chr q13.13 q13.13 121513 ChimerSeq ChiTaRs ChiTaRs AAAS-KDM2A AAAS chr12 53715001 KDM2A chr11 66901279 Exonic hg19 NA BQ301032 Out-of-frame Inter-chr q13.13 q13.2 Transcription factor 121514 ChimerSeq ChiTaRs ChiTaRs HYOU1-MTCH1 HYOU1 chr11 118915041 MTCH1 chr6 36936033 Exonic hg19 NA AI026692 Out-of-frame Inter-chr p21.2 121515 ChimerSeq ChiTaRs ChiTaRs HIRA-HIRA HIRA chr22 19333270 HIRA chr22 19333703 Exonic hg19 NA AW893202 Out-of-frame Intra-chr q11.21 Tumor suppressor gene q11.21 Tumor suppressor gene 121516 ChimerSeq ChiTaRs ChiTaRs BCMO1-AAK1 BCMO1 chr16 81312544 AAK1 chr2 69702543 Exonic hg19 NA BX100512 Out-of-frame Inter-chr p13.3 Other:NAK 121517 ChimerSeq ChiTaRs ChiTaRs MPO-ACSL1 MPO chr17 56355832 ACSL1 chr4 185677924 Exonic hg19 NA BI020982 Out-of-frame Inter-chr q22 q35.1 121518 ChimerSeq ChiTaRs ChiTaRs PITPNB-ARHGEF18 PITPNB chr22 28275273 ARHGEF18 chr19 7512936 Exonic hg19 NA AI863682 Out-of-frame Inter-chr q12.1 p13.2 121519 ChimerSeq ChiTaRs ChiTaRs SNX19-RPS23 SNX19 chr11 130753340 RPS23 chr5 81572280 Exonic hg19 NA BF154662 Out-of-frame Inter-chr q25 q14.2 121520 ChimerSeq ChiTaRs ChiTaRs PSMB5-PSMB5 PSMB5 chr14 23495240 PSMB5 chr14 23495245 Exonic hg19 NA BF761582 Out-of-frame Intra-chr q11.2 q11.2 121521 ChimerSeq ChiTaRs ChiTaRs PYGB-PYGB PYGB chr20 25231195 PYGB chr20 25231278 Exonic hg19 NA BF908082 Out-of-frame Intra-chr p11.21 p11.21 121522 ChimerSeq ChiTaRs ChiTaRs TMBIM6-TMBIM6 TMBIM6 chr12 50158683 TMBIM6 chr12 50158656 Exonic hg19 NA BG818072 Out-of-frame Intra-chr q13.12 q13.12 121523 ChimerSeq ChiTaRs ChiTaRs ABCD4-PRKCE ABCD4 chr14 74766227 PRKCE chr2 45921237 Exonic hg19 NA BF367112 Out-of-frame Inter-chr q24.3 p21 Tumor suppressor gene 121524 ChimerSeq ChiTaRs ChiTaRs KLC1-NBPF14 KLC1 chr14 104121062 NBPF14 chr1 145071539 Exonic hg19 NA CR738692 Out-of-frame Inter-chr q32.33 q21.2 121525 ChimerSeq ChiTaRs ChiTaRs SPPL3-LUC7L3 SPPL3 chr12 121248171 LUC7L3 chr17 48811027 Exonic hg19 NA AW853262 Out-of-frame Inter-chr q24.31 q21.33 121526 ChimerSeq ChiTaRs ChiTaRs SMARCB1-TTC3 SMARCB1 chr22 24175831 TTC3 chr21 38538614 Exonic hg19 NA BI050912 Out-of-frame Inter-chr q11.23 Oncogene Tumor suppressor gene q22.13 121527 ChimerSeq ChiTaRs ChiTaRs STRAP-IMMT STRAP chr12 16055979 IMMT chr2 86384370 Exonic hg19 NA AW604682 Out-of-frame Inter-chr p12.3 p11.2 121528 ChimerSeq ChiTaRs ChiTaRs FBXL19-FBXL19 FBXL19 chr16 30960402 FBXL19 chr16 30958413 Exonic hg19 NA AV731672 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Transcription factor 121529 ChimerSeq ChiTaRs ChiTaRs E2F1-E2F1 E2F1 chr20 32264041 E2F1 chr20 32263489 Exonic hg19 NA BG252912 Out-of-frame Intra-chr q11.22 Tumor suppressor gene Transcription factor q11.22 Tumor suppressor gene Transcription factor 121530 ChimerSeq ChiTaRs ChiTaRs APOL1-LYPD3 APOL1 chr22 36661664 LYPD3 chr19 43965849 Exonic hg19 NA BE717812 Out-of-frame Inter-chr q12.3 q13.31 121531 ChimerSeq ChiTaRs ChiTaRs AAGAB-AAGAB AAGAB chr15 67494315 AAGAB chr15 67528828 Exonic hg19 NA BP354992 Out-of-frame Intra-chr q23 q23 121532 ChimerSeq ChiTaRs ChiTaRs PC-SLC9A8 PC chr11 66625262 SLC9A8 chr20 48507575 Exonic hg19 NA AI080632 Out-of-frame Inter-chr q13.2 q13.13 121533 ChimerSeq ChiTaRs ChiTaRs SPAG9-TSN SPAG9 chr17 49100566 TSN chr2 122523912 Exonic hg19 NA BQ716562 Out-of-frame Inter-chr q21.33 q14.3 121534 ChimerSeq ChiTaRs ChiTaRs RHCG-ITGA6 RHCG chr15 90014889 ITGA6 chr2 173341156 Exonic hg19 NA AI141812 Out-of-frame Inter-chr q26.1 q31.1 121535 ChimerSeq ChiTaRs ChiTaRs SLC16A3-SLC16A3 SLC16A3 chr17 80196935 SLC16A3 chr17 80194689 Exonic hg19 NA AI128892 Out-of-frame Intra-chr q25.3 q25.3 121536 ChimerSeq ChiTaRs ChiTaRs TUG1-TUG1 TUG1 chr22 31373340 TUG1 chr22 31373347 Exonic hg19 NA AA742852 Out-of-frame Intra-chr q12.2 q12.2 121537 ChimerSeq ChiTaRs ChiTaRs USP22-ORC6 USP22 chr17 20916198 ORC6 chr16 46731973 Exonic hg19 NA BC009452 Out-of-frame Inter-chr p11.2 q11.2 121538 ChimerSeq ChiTaRs ChiTaRs FKBP4-ZFR FKBP4 chr12 2913104 ZFR chr5 32355973 Exonic hg19 NA AI652182 Out-of-frame Inter-chr p13.33 p13.3 121539 ChimerSeq ChiTaRs ChiTaRs TSHZ2-TSHZ2 TSHZ2 chr20 51759362 TSHZ2 chr20 51765700 Exonic hg19 NA AI631192 Out-of-frame Intra-chr q13.2 Transcription factor q13.2 Transcription factor 121540 ChimerSeq ChiTaRs ChiTaRs INSR-INSR INSR chr19 7136874 INSR chr19 7134768 Exonic hg19 NA BX114892 Out-of-frame Intra-chr p13.2 TK:InsR p13.2 TK:InsR 121541 ChimerSeq ChiTaRs ChiTaRs ATP11A-ATP11A ATP11A chr13 113446050 ATP11A chr13 113446097 Exonic hg19 NA AA826222 Out-of-frame Intra-chr q34 q34 121542 ChimerSeq ChiTaRs ChiTaRs SLC25A35-CHD3 SLC25A35 chr17 8193739 CHD3 chr17 7793022 Exonic hg19 NA AI669542 Out-of-frame Intra-chr p13.1 p13.1 121543 ChimerSeq ChiTaRs ChiTaRs ARHGAP32-LARP4 ARHGAP32 chr11 129056163 LARP4 chr12 50867893 Exonic hg19 NA BP417572 Out-of-frame Inter-chr q24.3 q13.12 121544 ChimerSeq ChiTaRs ChiTaRs SF3B2-ZGPAT SF3B2 chr11 65829469 ZGPAT chr20 62367290 Exonic hg19 NA BQ301332 CDS-3'UTR Inter-chr q13.1 q13.33 Transcription factor 121545 ChimerSeq ChiTaRs ChiTaRs CKB-CKB CKB chr14 103987652 CKB chr14 103987662 Exonic hg19 NA BP218932 Out-of-frame Intra-chr q32.33 q32.33 121546 ChimerSeq ChiTaRs ChiTaRs RTDR1-RTDR1 RTDR1 chr22 23438097 RTDR1 chr22 23466542 Exonic hg19 NA CB218252 Out-of-frame Intra-chr 121547 ChimerSeq ChiTaRs ChiTaRs UBE4A-HIPK1 UBE4A chr11 118251000 HIPK1 chr1 114518297 Exonic hg19 NA BE831592 Out-of-frame Inter-chr q23.3 p13.2 CMGC:DYRK 121548 ChimerSeq ChiTaRs ChiTaRs GAPDH-SERPINA1 GAPDH chr12 6647311 SERPINA1 chr14 94849493 Exonic hg19 NA CB147232 Out-of-frame Inter-chr p13.31 q32.13 121549 ChimerSeq ChiTaRs ChiTaRs ASCC2-FOXP4 ASCC2 chr22 30234142 FOXP4 chr6 41569325 Exonic hg19 NA AK126172 Out-of-frame Inter-chr q12.2 p21.1 Oncogene Transcription factor 121550 ChimerSeq ChiTaRs ChiTaRs DOCK6-DOCK6 DOCK6 chr19 11311138 DOCK6 chr19 11311112 Exonic hg19 NA BU676692 Out-of-frame Intra-chr p13.2 p13.2 121551 ChimerSeq ChiTaRs ChiTaRs RPLP0-NDUFA13 RPLP0 chr12 120635169 NDUFA13 chr19 19627042 Exonic hg19 NA AF155662 Out-of-frame Inter-chr q24.23 p13.11 121552 ChimerSeq ChiTaRs ChiTaRs MALAT1-ZAK MALAT1 chr11 65267227 ZAK chr2 174050842 Exonic hg19 NA BF816822 Out-of-frame Inter-chr q13.1 TKL:MLK 121553 ChimerSeq ChiTaRs ChiTaRs UBE2Z-UBE2Z UBE2Z chr17 47005887 UBE2Z chr17 47005871 Exonic hg19 NA BU194752 Out-of-frame Intra-chr q21.32 q21.32 121554 ChimerSeq ChiTaRs ChiTaRs EEF2-SPTBN1 EEF2 chr19 3980943 SPTBN1 chr2 54687045 Exonic hg19 NA CV392722 Out-of-frame Inter-chr p13.3 p16.2 Tumor suppressor gene 121555 ChimerSeq ChiTaRs ChiTaRs VEGFB-VEGFB VEGFB chr11 64006259 VEGFB chr11 64005849 Exonic hg19 NA BG959452 Out-of-frame Intra-chr q13.1 q13.1 121556 ChimerSeq ChiTaRs ChiTaRs VAC14-VAC14 VAC14 chr16 70827080 VAC14 chr16 70827610 Exonic hg19 NA CV310892 Out-of-frame Intra-chr q22.2 q22.2 121557 ChimerSeq ChiTaRs ChiTaRs MALAT1-COQ10B MALAT1 chr11 65272592 COQ10B chr2 198332770 Exonic hg19 NA BG980412 Out-of-frame Inter-chr q13.1 q33.1 121558 ChimerSeq ChiTaRs ChiTaRs NID2-ZFP91 NID2 chr14 52472159 ZFP91 chr11 58387416 Exonic hg19 NA BQ301232 Out-of-frame Inter-chr q22.1 q12.1 Transcription factor 121559 ChimerSeq ChiTaRs ChiTaRs MEG3-MEG3 MEG3 chr14 101302537 MEG3 chr14 101302553 Exonic hg19 NA BU783352 Out-of-frame Intra-chr q32.2 Tumor suppressor gene q32.2 Tumor suppressor gene 121560 ChimerSeq ChiTaRs ChiTaRs GSK3A-CDH12 GSK3A chr19 42743479 CDH12 chr5 21978541 Exonic hg19 NA CB956912 Out-of-frame Inter-chr q13.2 CMGC:GSK p14.3 121561 ChimerSeq ChiTaRs ChiTaRs ARHGEF1-R3HDM4 ARHGEF1 chr19 42411138 R3HDM4 chr19 896688 Exonic hg19 NA BF962512 Out-of-frame Intra-chr q13.2 p13.3 121562 ChimerSeq ChiTaRs ChiTaRs PTPRT-PTPRT PTPRT chr20 41746291 PTPRT chr20 41746295 Exonic hg19 NA BF924242 Out-of-frame Intra-chr q13.11 Oncogene Tumor suppressor gene q13.11 Oncogene Tumor suppressor gene 121563 ChimerSeq ChiTaRs ChiTaRs DCPS-C7 DCPS chr11 126208533 C7 chr5 40982513 Exonic hg19 NA AV705612 Out-of-frame Inter-chr q24.2 p13.1 Tumor suppressor gene 121564 ChimerSeq ChiTaRs ChiTaRs UBFD1-PUM2 UBFD1 chr16 23571265 PUM2 chr2 20489142 Exonic hg19 NA BF356582 Out-of-frame Inter-chr p12.2 p24.1 121565 ChimerSeq ChiTaRs ChiTaRs PVR-PVR PVR chr19 45169429 PVR chr19 45168930 Exonic hg19 NA BF223642 Out-of-frame Intra-chr q13.31 q13.31 121566 ChimerSeq ChiTaRs ChiTaRs IFT27-GPR143 IFT27 chr22 37154391 GPR143 chrX 9715041 Exonic hg19 NA BI003462 Out-of-frame Inter-chr q12.3 p22.2 121567 ChimerSeq ChiTaRs ChiTaRs ORAOV1-FRMD4A ORAOV1 chr11 69480522 FRMD4A chr10 14141324 Exonic hg19 NA AI309122 Out-of-frame Inter-chr q13.3 p13 121568 ChimerSeq ChiTaRs ChiTaRs NDRG2-NDRG2 NDRG2 chr14 21490255 NDRG2 chr14 21487301 Exonic hg19 NA BE185592 Out-of-frame Intra-chr q11.2 Tumor suppressor gene q11.2 Tumor suppressor gene 121569 ChimerSeq ChiTaRs ChiTaRs NEMF-KIAA1462 NEMF chr14 50050363 KIAA1462 chr10 30358374 Exonic hg19 NA BU564342 Out-of-frame Inter-chr q21.3 p11.23 121570 ChimerSeq ChiTaRs ChiTaRs LRP3-KIF26A LRP3 chr19 33696173 KIF26A chr14 104642141 Exonic hg19 NA BF877192 Out-of-frame Inter-chr q13.11 q32.33 121571 ChimerSeq ChiTaRs ChiTaRs METTL17-FABP4 METTL17 chr14 21464977 FABP4 chr8 82391102 Exonic hg19 NA BG992392 Out-of-frame Inter-chr q11.2 q21.13 121572 ChimerSeq ChiTaRs ChiTaRs MALAT1-MGAT4B MALAT1 chr11 65268310 MGAT4B chr5 179225193 Exonic hg19 NA BE089562 Out-of-frame Inter-chr q13.1 121573 ChimerSeq ChiTaRs ChiTaRs TEX9-TEX9 TEX9 chr15 56736789 TEX9 chr15 56735685 Exonic hg19 NA BM969002 Out-of-frame Intra-chr q21.3 q21.3 121574 ChimerSeq ChiTaRs ChiTaRs COL6A1-SFPQ COL6A1 chr21 47410319 SFPQ chr1 35653601 Exonic hg19 NA BQ366332 Out-of-frame Inter-chr q22.3 p34.3 121575 ChimerSeq ChiTaRs ChiTaRs AKAP8-AKAP8 AKAP8 chr19 15481176 AKAP8 chr19 15482303 Exonic hg19 NA BG255732 Out-of-frame Intra-chr p13.12 Transcription factor p13.12 Transcription factor 121576 ChimerSeq ChiTaRs ChiTaRs SDS-GNA14 SDS chr12 113830890 GNA14 chr9 80136639 Exonic hg19 NA AV645432 Out-of-frame Inter-chr q24.13 q21.2 121577 ChimerSeq ChiTaRs ChiTaRs NUMA1-NUMA1 NUMA1 chr11 71715300 NUMA1 chr11 71716369 Exonic hg19 NA BF823462 Out-of-frame Intra-chr q13.4 Oncogene q13.4 Oncogene 121578 ChimerSeq ChiTaRs ChiTaRs ACTG1-MEIS3 ACTG1 chr17 79479053 MEIS3 chr19 47917374 Exonic hg19 NA BI051072 Out-of-frame Inter-chr q25.3 q13.32 Transcription factor 121579 ChimerSeq ChiTaRs ChiTaRs EHD2-EHD2 EHD2 chr19 48231694 EHD2 chr19 48232830 Exonic hg19 NA AW804242 Out-of-frame Intra-chr q13.33 q13.33 121580 ChimerSeq ChiTaRs ChiTaRs H1F0-H1F0 H1F0 chr22 38203431 H1F0 chr22 38203055 Exonic hg19 NA BM998252 Out-of-frame Intra-chr q13.1 q13.1 121581 ChimerSeq ChiTaRs ChiTaRs MCAM-FN1 MCAM chr11 119179658 FN1 chr2 216236992 Exonic hg19 NA AA497002 Out-of-frame Inter-chr q23.3 q35 Oncogene 121582 ChimerSeq ChiTaRs ChiTaRs ZFAND6-ZFAND6 ZFAND6 chr15 80418001 ZFAND6 chr15 80416786 Exonic hg19 NA AW291042 Out-of-frame Intra-chr q25.1 q25.1 121583 ChimerSeq ChiTaRs ChiTaRs EMP2-EMP2 EMP2 chr16 10626262 EMP2 chr16 10622931 Exonic hg19 NA CA337292 Out-of-frame Intra-chr p13.13 Tumor suppressor gene p13.13 Tumor suppressor gene 121584 ChimerSeq ChiTaRs ChiTaRs CST3-BRF1 CST3 chr20 23614384 BRF1 chr14 105735506 Exonic hg19 NA BF926892 Out-of-frame Inter-chr p11.21 q32.33 Tumor suppressor gene 121585 ChimerSeq ChiTaRs ChiTaRs FAU-BAD FAU chr11 64888479 BAD chr11 64039085 Exonic hg19 NA BG479472 Out-of-frame Intra-chr q13.1 q13.1 121586 ChimerSeq ChiTaRs ChiTaRs HNRNPL-ST3GAL1 HNRNPL chr19 39333309 ST3GAL1 chr8 134468546 Exonic hg19 NA BI015032 Out-of-frame Inter-chr q24.22 121587 ChimerSeq ChiTaRs ChiTaRs CES2-CCDC92 CES2 chr16 66968497 CCDC92 chr12 124427894 Exonic hg19 NA BG036772 Out-of-frame Inter-chr q22.1 121588 ChimerSeq ChiTaRs ChiTaRs RAPGEFL1-NCL RAPGEFL1 chr17 38343661 NCL chr2 232319699 Exonic hg19 NA CN335102 Out-of-frame Inter-chr q21.1 q37.1 121589 ChimerSeq ChiTaRs ChiTaRs WDR76-C14orf1 WDR76 chr15 44136354 C14orf1 chr14 76117408 Exonic hg19 NA CR737222 Out-of-frame Inter-chr q15.3 q24.3 121590 ChimerSeq ChiTaRs ChiTaRs MCM8-MCM8 MCM8 chr20 5975383 MCM8 chr20 5975107 Exonic hg19 NA AA226582 Out-of-frame Intra-chr p12.3 p12.3 121591 ChimerSeq ChiTaRs ChiTaRs IRS2-IRS2 IRS2 chr13 110417619 IRS2 chr13 110433313 Exonic hg19 NA BX104742 Out-of-frame Intra-chr q34 Oncogene q34 Oncogene 121592 ChimerSeq ChiTaRs ChiTaRs PPHLN1-EHBP1 PPHLN1 chr12 42841486 EHBP1 chr2 63272545 Exonic hg19 NA AW366752 Out-of-frame Inter-chr q12 p15 121593 ChimerSeq ChiTaRs ChiTaRs LENG8-NDUFA8 LENG8 chr19 54962295 NDUFA8 chr9 124906541 Exonic hg19 NA BF762342 Out-of-frame Inter-chr q33.2 121594 ChimerSeq ChiTaRs ChiTaRs TAOK1-IDS TAOK1 chr17 27766899 IDS chrX 148561784 Exonic hg19 NA AW138862 Out-of-frame Inter-chr q11.2 q28 121595 ChimerSeq ChiTaRs ChiTaRs TBX4-TBX4 TBX4 chr17 59541465 TBX4 chr17 59538548 Exonic hg19 NA AA347922 Out-of-frame Intra-chr q23.2 Transcription factor q23.2 Transcription factor 121596 ChimerSeq ChiTaRs ChiTaRs TPGS2-MCM4 TPGS2 chr18 34465799 MCM4 chr8 48889708 Exonic hg19 NA BC038772 Out-of-frame Inter-chr q12.2 q11.21 121597 ChimerSeq ChiTaRs ChiTaRs OS9-MYH9 OS9 chr12 58112096 MYH9 chr22 36691706 Exonic hg19 NA BF873562 Out-of-frame Inter-chr q13.3 q12.3 Oncogene Tumor suppressor gene 121598 ChimerSeq ChiTaRs ChiTaRs SFSWAP-CYP11A1 SFSWAP chr12 132216424 CYP11A1 chr15 74630957 Exonic hg19 NA BG011362 Out-of-frame Inter-chr q24.33 q24.1 121599 ChimerSeq ChiTaRs ChiTaRs TENC1-MMP12 TENC1 chr12 53454704 MMP12 chr11 102742344 Exonic hg19 NA BF820902 Out-of-frame Inter-chr q22.2 121600 ChimerSeq ChiTaRs ChiTaRs ZNF133-BMPR2 ZNF133 chr20 18287341 BMPR2 chr2 203432214 Exonic hg19 NA AK074502 Out-of-frame Inter-chr p11.23 Transcription factor q33.1 TKL:STKR Tumor suppressor gene 121601 ChimerSeq ChiTaRs ChiTaRs ELL3-DYNLT1 ELL3 chr15 44085299 DYNLT1 chr6 159057531 Exonic hg19 NA BU934532 Out-of-frame Inter-chr q15.3 q25.3 121602 ChimerSeq ChiTaRs ChiTaRs KCTD15-KCTD15 KCTD15 chr19 34305568 KCTD15 chr19 34305554 Exonic hg19 NA BG283452 Out-of-frame Intra-chr q13.11 q13.11 121603 ChimerSeq ChiTaRs ChiTaRs BIN2-LYN BIN2 chr12 51675103 LYN chr8 56830819 Exonic hg19 NA BF925862 Out-of-frame Inter-chr q13.13 q12.1 TK:Src 121604 ChimerSeq ChiTaRs ChiTaRs TRBV20-1-TRBV20-1 TRBV20-1 chr16 2011826 TRBV20-1 chr16 2009717 Exonic hg19 NA AA469352 Out-of-frame Intra-chr 121605 ChimerSeq ChiTaRs ChiTaRs LRRC45-LRRC45 LRRC45 chr17 79985604 LRRC45 chr17 79981421 Exonic hg19 NA BG775652 Out-of-frame Intra-chr q25.3 q25.3 121606 ChimerSeq ChiTaRs ChiTaRs RNF24-RNF24 RNF24 chr20 3983196 RNF24 chr20 3983538 Exonic hg19 NA BF830842 Out-of-frame Intra-chr p13 p13 121607 ChimerSeq ChiTaRs ChiTaRs NLK-NLK NLK chr17 26469760 NLK chr17 26469039 Exonic hg19 NA CF144002 Out-of-frame Intra-chr q11.2 CMGC:MAPK q11.2 CMGC:MAPK 121608 ChimerSeq ChiTaRs ChiTaRs ARFGEF2-TMED11P ARFGEF2 chr20 47587847 TMED11P chr4 1110360 Exonic hg19 NA AW752522 Out-of-frame Inter-chr q13.13 p16.3 121609 ChimerSeq ChiTaRs ChiTaRs SLC25A3-TSNAX SLC25A3 chr12 98995430 TSNAX chr1 231696901 Exonic hg19 NA BE739692 Out-of-frame Inter-chr q23.1 q42.2 121610 ChimerSeq ChiTaRs ChiTaRs PIEZO2-ALG12 PIEZO2 chr18 10789109 ALG12 chr22 50296868 Exonic hg19 NA AK098782 Out-of-frame Inter-chr p11.21 q13.33 121611 ChimerSeq ChiTaRs ChiTaRs MAST3-EHMT2 MAST3 chr19 18228513 EHMT2 chr6 3181283 Exonic hg19 NA BF873412 Out-of-frame Inter-chr p13.11 AGC:MAST 121612 ChimerSeq ChiTaRs ChiTaRs FKBP4-FKBP4 FKBP4 chr12 2912337 FKBP4 chr12 2909589 Exonic hg19 NA BF084122 Out-of-frame Intra-chr p13.33 p13.33 121613 ChimerSeq ChiTaRs ChiTaRs CAMKK2-PIP5K1A CAMKK2 chr12 121698521 PIP5K1A chr1 151171640 Exonic hg19 NA BQ321472 Out-of-frame Inter-chr q24.31 q21.3 121614 ChimerSeq ChiTaRs ChiTaRs RBM39-WASF2 RBM39 chr20 34330111 WASF2 chr1 27752673 Exonic hg19 NA BF762912 Out-of-frame Inter-chr q11.22 p36.11 121615 ChimerSeq ChiTaRs ChiTaRs ATP6V0A1-ATP6V0A1 ATP6V0A1 chr17 40674309 ATP6V0A1 chr17 40673367 Exonic hg19 NA AA297522 Out-of-frame Intra-chr q21.2 q21.2 121616 ChimerSeq ChiTaRs ChiTaRs ZFP106-ZFP106 ZFP106 chr15 42706544 ZFP106 chr15 42706544 Exonic hg19 NA AA508792 Out-of-frame Intra-chr 121617 ChimerSeq ChiTaRs ChiTaRs SLC9A3R1-MALAT1 SLC9A3R1 chr17 72765490 MALAT1 chr11 65268483 Exonic hg19 NA AA627452 Out-of-frame Inter-chr q25.1 Tumor suppressor gene q13.1 121618 ChimerSeq ChiTaRs ChiTaRs GSS-GSS GSS chr20 33531020 GSS chr20 33530631 Exonic hg19 NA AW894712 Out-of-frame Intra-chr q11.22 q11.22 121619 ChimerSeq ChiTaRs ChiTaRs MIR639-GPBP1 MIR639 chr19 14673368 GPBP1 chr5 56527108 Exonic hg19 NA BC070132 Out-of-frame Inter-chr p13.12 q11.2 Transcription factor 121620 ChimerSeq ChiTaRs ChiTaRs LTBP4-STAB1 LTBP4 chr19 41125336 STAB1 chr3 52556687 Exonic hg19 NA BF872672 Out-of-frame Inter-chr q13.2 p21.1 121621 ChimerSeq ChiTaRs ChiTaRs HDAC7-VEPH1 HDAC7 chr12 48185424 VEPH1 chr3 156982438 Exonic hg19 NA BX112372 Out-of-frame Inter-chr q13.11 q25.32 121622 ChimerSeq ChiTaRs ChiTaRs NDE1-NCOA6 NDE1 chr16 15797207 NCOA6 chr20 33303130 Exonic hg19 NA AA535712 Out-of-frame Inter-chr p13.11 q11.22 121623 ChimerSeq ChiTaRs ChiTaRs RGL3-QPCT RGL3 chr19 11505077 QPCT chr2 37571871 Exonic hg19 NA BQ892962 Out-of-frame Inter-chr p13.2 p22.2 121624 ChimerSeq ChiTaRs ChiTaRs CACNG8-BIN1 CACNG8 chr19 54484133 BIN1 chr2 127815247 Exonic hg19 NA BI034622 Out-of-frame Inter-chr q13.42 q14.3 Tumor suppressor gene 121625 ChimerSeq ChiTaRs ChiTaRs ATF7IP-ATP6V0E1 ATF7IP chr12 14577519 ATP6V0E1 chr5 172449017 Exonic hg19 NA BE077162 Out-of-frame Inter-chr p13.1 q35.1 121626 ChimerSeq ChiTaRs ChiTaRs DSCAML1-SLC20A2 DSCAML1 chr11 117602941 SLC20A2 chr8 42312789 Exonic hg19 NA CV322612 Out-of-frame Inter-chr q23.3 p11.21 121627 ChimerSeq ChiTaRs ChiTaRs CYP19A1-AXIN2 CYP19A1 chr15 51623610 AXIN2 chr17 63544221 Exonic hg19 NA BF997742 Out-of-frame Inter-chr q21.2 q24.1 Tumor suppressor gene 121628 ChimerSeq ChiTaRs ChiTaRs NDUFA6-YARS NDUFA6 chr22 42486671 YARS chr1 33240878 Exonic hg19 NA BU174672 Out-of-frame Inter-chr p35.1 121629 ChimerSeq ChiTaRs ChiTaRs EMP1-EMP1 EMP1 chr12 13368462 EMP1 chr12 13368667 Exonic hg19 NA BE005032 Out-of-frame Intra-chr p13.1 Tumor suppressor gene p13.1 Tumor suppressor gene 121630 ChimerSeq ChiTaRs ChiTaRs SRRM2-SRRM2 SRRM2 chr16 2812337 SRRM2 chr16 2812344 Exonic hg19 NA BG952632 Out-of-frame Intra-chr p13.3 p13.3 121631 ChimerSeq ChiTaRs ChiTaRs DYRK2-DYRK2 DYRK2 chr12 68055246 DYRK2 chr12 68054910 Exonic hg19 NA C15802 Out-of-frame Intra-chr q15 CMGC:DYRK q15 CMGC:DYRK 121632 ChimerSeq ChiTaRs ChiTaRs NPTN-KRT19 NPTN chr15 73866109 KRT19 chr17 39680206 Exonic hg19 NA BM048392 Out-of-frame Inter-chr q24.1 q21.2 Tumor suppressor gene 121633 ChimerSeq ChiTaRs ChiTaRs RASAL1-ARL4C RASAL1 chr12 113537368 ARL4C chr2 235403864 Exonic hg19 NA AI918592 Out-of-frame Inter-chr q24.13 Tumor suppressor gene q37.1 121634 ChimerSeq ChiTaRs ChiTaRs FBLN1-MAP3K4 FBLN1 chr22 45948607 MAP3K4 chr6 161498545 Exonic hg19 NA CV372922 Out-of-frame Inter-chr q13.31 Tumor suppressor gene q26 STE:STE11 Tumor suppressor gene 121635 ChimerSeq ChiTaRs ChiTaRs PRPSAP2-LFNG PRPSAP2 chr17 18768832 LFNG chr7 2565187 Exonic hg19 NA BE772582 Out-of-frame Inter-chr p11.2 p22.3 121636 ChimerSeq ChiTaRs ChiTaRs SNN-SNN SNN chr16 11772492 SNN chr16 11772052 Exonic hg19 NA AA448622 Out-of-frame Intra-chr p13.13 p13.13 121637 ChimerSeq ChiTaRs ChiTaRs CSTB-EXT2 CSTB chr21 45193977 EXT2 chr11 44200528 Exonic hg19 NA AA554222 Out-of-frame Inter-chr q22.3 p11.2 Oncogene Tumor suppressor gene 121638 ChimerSeq ChiTaRs ChiTaRs C16orf93-PHKG2 C16orf93 chr16 30772901 PHKG2 chr16 30768842 Exonic hg19 NA BF853022 Out-of-frame Intra-chr p11.2 121639 ChimerSeq ChiTaRs ChiTaRs ANKRD10-CPNE4 ANKRD10 chr13 111536136 CPNE4 chr3 131804259 Exonic hg19 NA BE005082 Out-of-frame Inter-chr q34 q22.1 121640 ChimerSeq ChiTaRs ChiTaRs ACTN1-FLOT2 ACTN1 chr14 69366667 FLOT2 chr17 27207212 Exonic hg19 NA BF763712 Out-of-frame Inter-chr q24.1 q11.2 121641 ChimerSeq ChiTaRs ChiTaRs ADPGK-ADPGK ADPGK chr15 73048703 ADPGK chr15 73064124 Exonic hg19 NA BQ668982 Out-of-frame Intra-chr q24.1 q24.1 121642 ChimerSeq ChiTaRs ChiTaRs SMAD3-PHLDB1 SMAD3 chr15 67472441 PHLDB1 chr11 118516163 Exonic hg19 NA BE718772 Out-of-frame Inter-chr q22.33 Transcription factor q23.3 121643 ChimerSeq ChiTaRs ChiTaRs A2M-EPN2 A2M chr12 9246176 EPN2 chr17 19184805 Exonic hg19 NA BF849872 Out-of-frame Inter-chr p13.31 p11.2 121644 ChimerSeq ChiTaRs ChiTaRs PPP1R9B-FLNA PPP1R9B chr17 48218471 FLNA chrX 153590930 Exonic hg19 NA BF874102 Out-of-frame Inter-chr q21.33 q28 Tumor suppressor gene 121645 ChimerSeq ChiTaRs ChiTaRs UQCR10-PXN UQCR10 chr22 30165915 PXN chr12 120694339 Exonic hg19 NA AW371242 Out-of-frame Inter-chr q12.2 q24.23 121646 ChimerSeq ChiTaRs ChiTaRs PACSIN2-HRH1 PACSIN2 chr22 43356718 HRH1 chr3 11208482 Exonic hg19 NA BF850392 Out-of-frame Inter-chr q13.2 p25.3 121647 ChimerSeq ChiTaRs ChiTaRs MGST1-MGST1 MGST1 chr12 16517338 MGST1 chr12 16516731 Exonic hg19 NA BM983802 Out-of-frame Intra-chr p12.3 p12.3 121648 ChimerSeq ChiTaRs ChiTaRs LOC100132247-AFAP1-AS1 LOC100132247 chr16 22531173 AFAP1-AS1 chr4 7772246 Exonic hg19 NA BF823052 Out-of-frame Inter-chr p16.1 121649 ChimerSeq ChiTaRs ChiTaRs TUBA1A-SNRNP27 TUBA1A chr12 49578816 SNRNP27 chr2 70122314 Exonic hg19 NA AI199092 Out-of-frame Inter-chr q13.12 p13.3 121650 ChimerSeq ChiTaRs ChiTaRs BCAM-ATP11B BCAM chr19 45322054 ATP11B chr3 182512152 Exonic hg19 NA BE712932 Out-of-frame Inter-chr q13.32 q26.33 Oncogene 121651 ChimerSeq ChiTaRs ChiTaRs CCDC64-SLC4A2 CCDC64 chr12 120532111 SLC4A2 chr7 150773515 Exonic hg19 NA CB854162 Out-of-frame Inter-chr q36.1 121652 ChimerSeq ChiTaRs ChiTaRs RBBP6-RSF1 RBBP6 chr16 24583738 RSF1 chr11 77409656 Exonic hg19 NA AW887342 Out-of-frame Inter-chr p12.1 q14.1 121653 ChimerSeq ChiTaRs ChiTaRs CD9-CD9 CD9 chr12 6341880 CD9 chr12 6342592 Exonic hg19 NA AW993802 Out-of-frame Intra-chr p13.31 p13.31 121654 ChimerSeq ChiTaRs ChiTaRs C19orf43-THNSL2 C19orf43 chr19 12845045 THNSL2 chr2 88472569 Exonic hg19 NA BE172782 Out-of-frame Inter-chr p13.13 p11.2 121655 ChimerSeq ChiTaRs ChiTaRs DESI2-GFAP DESI2 chr22 41997667 GFAP chr17 42991109 Exonic hg19 NA CV425882 Out-of-frame Inter-chr q44 q21.31 121656 ChimerSeq ChiTaRs ChiTaRs PHF21B-NCOR1 PHF21B chr22 45280992 NCOR1 chr17 15945890 Exonic hg19 NA BF961392 Out-of-frame Inter-chr q13.31 p11.2 Oncogene 121657 ChimerSeq ChiTaRs ChiTaRs MBP-ETNK2 MBP chr18 74691618 ETNK2 chr1 204110463 Exonic hg19 NA BF933482 Out-of-frame Inter-chr q23 q32.1 121658 ChimerSeq ChiTaRs ChiTaRs PANK2-VAMP3 PANK2 chr20 3870763 VAMP3 chr1 7839660 Exonic hg19 NA BF896192 Out-of-frame Inter-chr p13 p36.23 121659 ChimerSeq ChiTaRs ChiTaRs DAAM1-DAAM1 DAAM1 chr14 59835533 DAAM1 chr14 59834192 Exonic hg19 NA BG944832 Out-of-frame Intra-chr q23.1 q23.1 121660 ChimerSeq ChiTaRs ChiTaRs SUGT1-SUGT1 SUGT1 chr13 53260911 SUGT1 chr13 53260332 Exonic hg19 NA AW838402 Out-of-frame Intra-chr q14.3 q14.3 121661 ChimerSeq ChiTaRs ChiTaRs VAPA-VAPA VAPA chr18 9954623 VAPA chr18 9954370 Exonic hg19 NA BF094402 Out-of-frame Intra-chr p11.22 p11.22 121662 ChimerSeq ChiTaRs ChiTaRs ILF3-ILF3 ILF3 chr19 10793343 ILF3 chr19 10802777 Exonic hg19 NA CA335912 Out-of-frame Intra-chr p13.2 p13.2 121663 ChimerSeq ChiTaRs ChiTaRs BAZ1A-MYO1E BAZ1A chr14 35234430 MYO1E chr15 59515304 Exonic hg19 NA BE005282 Out-of-frame Inter-chr q13.2 q22.2 121664 ChimerSeq ChiTaRs ChiTaRs COASY-COASY COASY chr17 40716835 COASY chr17 40716816 Exonic hg19 NA BQ212022 Out-of-frame Intra-chr q21.2 q21.2 121665 ChimerSeq ChiTaRs ChiTaRs VAMP2-VAMP2 VAMP2 chr17 8063184 VAMP2 chr17 8062666 Exonic hg19 NA BE219072 Out-of-frame Intra-chr p13.1 p13.1 121666 ChimerSeq ChiTaRs ChiTaRs CD3D-KIAA0100 CD3D chr11 118212582 KIAA0100 chr17 26962070 Exonic hg19 NA BF802522 Out-of-frame Inter-chr q23.3 q11.2 121667 ChimerSeq ChiTaRs ChiTaRs CHD2-CHD2 CHD2 chr15 93571172 CHD2 chr15 93570700 Exonic hg19 NA BM969602 Out-of-frame Intra-chr q26.1 q26.1 121668 ChimerSeq ChiTaRs ChiTaRs CA12-CA12 CA12 chr15 63620058 CA12 chr15 63619575 Exonic hg19 NA AI478632 Out-of-frame Intra-chr q22.2 q22.2 121669 ChimerSeq ChiTaRs ChiTaRs H2AFX-ATG12 H2AFX chr11 118965445 ATG12 chr5 115176895 Exonic hg19 NA AI243752 Out-of-frame Inter-chr q23.3 Tumor suppressor gene q22.3 121670 ChimerSeq ChiTaRs ChiTaRs COLCA1-COLCA1 COLCA1 chr11 111171936 COLCA1 chr11 111171901 Exonic hg19 NA CN370412 Out-of-frame Intra-chr q23.1 q23.1 121671 ChimerSeq ChiTaRs ChiTaRs SLC6A15-NR1D1 SLC6A15 chr12 85305595 NR1D1 chr17 38250331 Exonic hg19 NA BE720232 Out-of-frame Inter-chr q21.31 q21.1 Transcription factor 121672 ChimerSeq ChiTaRs ChiTaRs NIP7-SLU7 NIP7 chr16 69376240 SLU7 chr5 159829638 Exonic hg19 NA CR737082 Out-of-frame Inter-chr q22.1 q33.3 121673 ChimerSeq ChiTaRs ChiTaRs NEAT1-TXNL1 NEAT1 chr11 65191499 TXNL1 chr18 54281655 Exonic hg19 NA BE177702 Out-of-frame Inter-chr q13.1 q21.31 121674 ChimerSeq ChiTaRs ChiTaRs CRIP2-CRIP2 CRIP2 chr14 105946245 CRIP2 chr14 105944826 Exonic hg19 NA AW246212 Out-of-frame Intra-chr q32.33 q32.33 121675 ChimerSeq ChiTaRs ChiTaRs DIS3L-LEPROT DIS3L chr15 66615127 LEPROT chr1 65899242 Exonic hg19 NA BQ307642 Out-of-frame Inter-chr q22.31 p31.3 121676 ChimerSeq ChiTaRs ChiTaRs CAMKK1-CAMKK1 CAMKK1 chr17 3765440 CAMKK1 chr17 3764671 Exonic hg19 NA BU193052 Out-of-frame Intra-chr p13.2 p13.2 121677 ChimerSeq ChiTaRs ChiTaRs HSCB-C6orf165 HSCB chr22 29153199 C6orf165 chr6 88175463 Exonic hg19 NA BX096842 Out-of-frame Inter-chr q12.1 121678 ChimerSeq ChiTaRs ChiTaRs TGM2-TGM2 TGM2 chr20 36756948 TGM2 chr20 36756863 Exonic hg19 NA BF343182 3'UTR-3'UTR Intra-chr q11.23 q11.23 121679 ChimerSeq ChiTaRs ChiTaRs ERO1L-ERO1L ERO1L chr14 53161235 ERO1L chr14 53160567 Exonic hg19 NA CA948302 Out-of-frame Intra-chr 121680 ChimerSeq ChiTaRs ChiTaRs CMIP-SLC26A11 CMIP chr16 81537301 SLC26A11 chr17 78216790 Exonic hg19 NA BF830042 Out-of-frame Inter-chr q23.2 q25.3 121681 ChimerSeq ChiTaRs ChiTaRs ALDH1A3-ALDH1A3 ALDH1A3 chr15 101452132 ALDH1A3 chr15 101451947 Exonic hg19 NA BU608092 Out-of-frame Intra-chr q26.3 q26.3 121682 ChimerSeq ChiTaRs ChiTaRs C3-ALB C3 chr19 6682029 ALB chr4 74270017 Exonic hg19 NA AI305112 Out-of-frame Inter-chr p13.3 q13.3 121683 ChimerSeq ChiTaRs ChiTaRs PTTG1IP-CES2 PTTG1IP chr21 46270259 CES2 chr16 66968737 Exonic hg19 NA AA368402 Out-of-frame Inter-chr q22.3 q22.1 121684 ChimerSeq ChiTaRs ChiTaRs MRPL11-MRFAP1 MRPL11 chr11 66206312 MRFAP1 chr4 6643927 Exonic hg19 NA AF090922 Out-of-frame Inter-chr q13.2 p16.1 121685 ChimerSeq ChiTaRs ChiTaRs UBE2V1-UBE2V1 UBE2V1 chr20 48709937 UBE2V1 chr20 48709900 Exonic hg19 NA AW807602 Out-of-frame Intra-chr q13.13 q13.13 121686 ChimerSeq ChiTaRs ChiTaRs ACTN4-ACTN4 ACTN4 chr19 39220958 ACTN4 chr19 39216393 Exonic hg19 NA AA488242 Out-of-frame Intra-chr 121687 ChimerSeq ChiTaRs ChiTaRs PCDH9-CCDC91 PCDH9 chr13 67559923 CCDC91 chr12 28702312 Exonic hg19 NA BF921132 Out-of-frame Inter-chr q21.32 Tumor suppressor gene p11.22 121688 ChimerSeq ChiTaRs ChiTaRs TNFRSF13B-NBEAL2 TNFRSF13B chr17 16875413 NBEAL2 chr3 47049091 Exonic hg19 NA BC028072 Out-of-frame Inter-chr p11.2 p21.31 121689 ChimerSeq ChiTaRs ChiTaRs MAPKAPK5-MAPKAPK5 MAPKAPK5 chr12 112330961 MAPKAPK5 chr12 112326336 Exonic hg19 NA BU622192 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 CAMK:MAPKAPK 121690 ChimerSeq ChiTaRs ChiTaRs GCN1L1-GCN1L1 GCN1L1 chr12 120575474 GCN1L1 chr12 120572113 Exonic hg19 NA BG388842 Out-of-frame Intra-chr 121691 ChimerSeq ChiTaRs ChiTaRs DYNC2H1-PUM1 DYNC2H1 chr11 103144066 PUM1 chr1 31435389 Exonic hg19 NA BE147332 Out-of-frame Inter-chr q22.3 p35.2 121692 ChimerSeq ChiTaRs ChiTaRs SLC23A2-SLC23A2 SLC23A2 chr20 4880357 SLC23A2 chr20 4883113 Exonic hg19 NA BF923492 Out-of-frame Intra-chr p13 p13 121693 ChimerSeq ChiTaRs ChiTaRs MYO18A-MYO18A MYO18A chr17 27400802 MYO18A chr17 27400539 Exonic hg19 NA CN268132 Out-of-frame Intra-chr q11.2 Oncogene q11.2 Oncogene 121694 ChimerSeq ChiTaRs ChiTaRs RAB5C-RAB5C RAB5C chr17 40277283 RAB5C chr17 40277460 Exonic hg19 NA BE083102 Out-of-frame Intra-chr q21.2 q21.2 121695 ChimerSeq ChiTaRs ChiTaRs KRT86-KRT86 KRT86 chr12 52702495 KRT86 chr12 52702552 Exonic hg19 NA AA393572 Out-of-frame Intra-chr q13.13 q13.13 121696 ChimerSeq ChiTaRs ChiTaRs RHCG-TULP4 RHCG chr15 90016359 TULP4 chr6 158915672 Exonic hg19 NA BQ351152 Out-of-frame Inter-chr q26.1 q25.3 121697 ChimerSeq ChiTaRs ChiTaRs CAPNS1-CAPNS1 CAPNS1 chr19 36640961 CAPNS1 chr19 36633620 Exonic hg19 NA AW405342 Out-of-frame Intra-chr q13.12 q13.12 121698 ChimerSeq ChiTaRs ChiTaRs NDUFV1-NDUFV1 NDUFV1 chr11 67377003 NDUFV1 chr11 67374411 Exonic hg19 NA BP193532 Out-of-frame Intra-chr q13.2 q13.2 121699 ChimerSeq ChiTaRs ChiTaRs RPS16-FBL RPS16 chr19 39926575 FBL chr19 40331337 Exonic hg19 NA BE904292 Out-of-frame Intra-chr q13.2 121700 ChimerSeq ChiTaRs ChiTaRs GSS-OASL GSS chr20 33516533 OASL chr12 121458739 Exonic hg19 NA AW849012 Out-of-frame Inter-chr q11.22 q24.31 121701 ChimerSeq ChiTaRs ChiTaRs TCFL5-SNRPB TCFL5 chr20 61476986 SNRPB chr20 2446421 Exonic hg19 NA BG472482 Out-of-frame Intra-chr q13.33 Transcription factor p13 121702 ChimerSeq ChiTaRs ChiTaRs CLSTN3-SIRT2 CLSTN3 chr12 7310828 SIRT2 chr19 39369581 Exonic hg19 NA BE703262 Out-of-frame Inter-chr p13.31 Tumor suppressor gene 121703 ChimerSeq ChiTaRs ChiTaRs MYBBP1A-EPC2 MYBBP1A chr17 4457386 EPC2 chr2 149539311 Exonic hg19 NA BQ371062 Out-of-frame Inter-chr p13.2 Tumor suppressor gene q23.1 121704 ChimerSeq ChiTaRs ChiTaRs MED13L-MED13L MED13L chr12 116441659 MED13L chr12 116441733 Exonic hg19 NA AA502152 Out-of-frame Intra-chr q24.21 q24.21 121705 ChimerSeq ChiTaRs ChiTaRs ACADVL-DLG4 ACADVL chr17 7127691 DLG4 chr17 7123299 Exonic hg19 NA AV751942 Out-of-frame Intra-chr p13.1 p13.1 Tumor suppressor gene 121706 ChimerSeq ChiTaRs ChiTaRs TMEM170A-CAPN3 TMEM170A chr16 75488022 CAPN3 chr15 42651101 Exonic hg19 NA AA358992 Out-of-frame Inter-chr q23.1 q15.1 121707 ChimerSeq ChiTaRs ChiTaRs TMEM199-TMEM199 TMEM199 chr17 26689268 TMEM199 chr17 26688832 Exonic hg19 NA BU675842 Out-of-frame Intra-chr q11.2 q11.2 121708 ChimerSeq ChiTaRs ChiTaRs EXOC7-MTDH EXOC7 chr17 74079675 MTDH chr8 98731291 Exonic hg19 NA CR736942 Out-of-frame Inter-chr q25.1 q22.1 121709 ChimerSeq ChiTaRs ChiTaRs ARSG-ARSG ARSG chr17 66303497 ARSG chr17 66303503 Exonic hg19 NA BF333842 Out-of-frame Intra-chr q24.2 q24.2 121710 ChimerSeq ChiTaRs ChiTaRs ZNF207-ZNF207 ZNF207 chr17 30701068 ZNF207 chr17 30698578 Exonic hg19 NA BX474682 Out-of-frame Intra-chr q11.2 Transcription factor q11.2 Transcription factor 121711 ChimerSeq ChiTaRs ChiTaRs ZGPAT-FAM171A1 ZGPAT chr20 62365518 FAM171A1 chr10 15253897 Exonic hg19 NA BF803702 Out-of-frame Inter-chr q13.33 Transcription factor p13 121712 ChimerSeq ChiTaRs ChiTaRs CABLES1-CABLES1 CABLES1 chr18 20838625 CABLES1 chr18 20838272 Exonic hg19 NA AA678912 Out-of-frame Intra-chr q11.2 Tumor suppressor gene q11.2 Tumor suppressor gene 121713 ChimerSeq ChiTaRs ChiTaRs NDUFA9-TRPC7 NDUFA9 chr12 4796399 TRPC7 chr5 135585215 Exonic hg19 NA AJ711522 Out-of-frame Inter-chr p13.32 q31.1 121714 ChimerSeq ChiTaRs ChiTaRs DCAF7-DCAF7 DCAF7 chr17 61666465 DCAF7 chr17 61656787 Exonic hg19 NA AL121172 Out-of-frame Intra-chr q23.3 q23.3 121715 ChimerSeq ChiTaRs ChiTaRs ACOX1-PRKAG2 ACOX1 chr17 73939119 PRKAG2 chr7 151352004 Exonic hg19 NA AI766782 Out-of-frame Inter-chr q25.1 q36.1 121716 ChimerSeq ChiTaRs ChiTaRs COPE-HBP1 COPE chr19 19010383 HBP1 chr7 106841170 Exonic hg19 NA AA709142 Out-of-frame Inter-chr p13.11 Tumor suppressor gene Transcription factor 121717 ChimerSeq ChiTaRs ChiTaRs IFT140-IFT140 IFT140 chr16 1599613 IFT140 chr16 1599982 Exonic hg19 NA AK023912 Out-of-frame Intra-chr p13.3 p13.3 121718 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65271159 MALAT1 chr11 65266535 Exonic hg19 NA BF577322 Out-of-frame Intra-chr q13.1 q13.1 121719 ChimerSeq ChiTaRs ChiTaRs BTBD7-EEF1A1 BTBD7 chr14 93708104 EEF1A1 chr6 74227238 Exonic hg19 NA BC006102 Out-of-frame Inter-chr q13 Tumor suppressor gene 121720 ChimerSeq ChiTaRs ChiTaRs GDE1-GDE1 GDE1 chr16 19516363 GDE1 chr16 19514280 Exonic hg19 NA BE007392 Out-of-frame Intra-chr p12.3 p12.3 121721 ChimerSeq ChiTaRs ChiTaRs DEXI-IL2 DEXI chr16 11032360 IL2 chr4 123373266 Exonic hg19 NA Z14319 Out-of-frame Inter-chr p13.13 q27 Oncogene 121722 ChimerSeq ChiTaRs ChiTaRs APP-FLOT1 APP chr21 27372435 FLOT1 chr6 2030214 Exonic hg19 NA AW366722 Out-of-frame Inter-chr q21.3 121723 ChimerSeq ChiTaRs ChiTaRs THBS1-THBS1 THBS1 chr15 39889183 THBS1 chr15 39889004 Exonic hg19 NA AA947542 Out-of-frame Intra-chr q14 Oncogene Tumor suppressor gene q14 Oncogene Tumor suppressor gene 121724 ChimerSeq ChiTaRs ChiTaRs PHLPP2-PHLPP2 PHLPP2 chr16 71718965 PHLPP2 chr16 71717160 Exonic hg19 NA AW885592 Out-of-frame Intra-chr q22.2 Tumor suppressor gene q22.2 Tumor suppressor gene 121725 ChimerSeq ChiTaRs ChiTaRs MALAT1-NUPL1 MALAT1 chr11 65268334 NUPL1 chr13 25915777 Exonic hg19 NA BE180532 Out-of-frame Inter-chr q13.1 121726 ChimerSeq ChiTaRs ChiTaRs DYNLRB2-DYNLRB2 DYNLRB2 chr16 80584541 DYNLRB2 chr16 80577219 Exonic hg19 NA BU675852 3'UTR-CDS Intra-chr q23.2 q23.2 121727 ChimerSeq ChiTaRs ChiTaRs NAA20-JUP NAA20 chr20 20014177 JUP chr17 39847167 Exonic hg19 NA AA115432 Out-of-frame Inter-chr p11.23 q21.2 Tumor suppressor gene 121728 ChimerSeq ChiTaRs ChiTaRs PGS1-PGS1 PGS1 chr17 76403392 PGS1 chr17 76403401 Exonic hg19 NA BF898112 Out-of-frame Intra-chr q25.3 q25.3 121729 ChimerSeq ChiTaRs ChiTaRs PAPLN-PAPLN PAPLN chr14 73734548 PAPLN chr14 73735106 Exonic hg19 NA BI000622 Out-of-frame Intra-chr q24.2 q24.2 121730 ChimerSeq ChiTaRs ChiTaRs PRIMA1-NTPCR PRIMA1 chr14 94254809 NTPCR chr1 233086414 Exonic hg19 NA BC080642 Out-of-frame Inter-chr q42.2 121731 ChimerSeq ChiTaRs ChiTaRs ZNF592-ZNF592 ZNF592 chr15 85328018 ZNF592 chr15 85328033 Exonic hg19 NA BF951592 Out-of-frame Intra-chr q25.3 Transcription factor q25.3 Transcription factor 121732 ChimerSeq ChiTaRs ChiTaRs COL1A1-COL1A1 COL1A1 chr17 48263336 COL1A1 chr17 48264074 Exonic hg19 NA BQ776272 Out-of-frame Intra-chr q21.33 Oncogene q21.33 Oncogene 121733 ChimerSeq ChiTaRs ChiTaRs DNASE2-DNASE2 DNASE2 chr19 12987083 DNASE2 chr19 12989248 Exonic hg19 NA AW610362 Out-of-frame Intra-chr p13.13 p13.13 121734 ChimerSeq ChiTaRs ChiTaRs ARHGEF1-TMC8 ARHGEF1 chr19 42411603 TMC8 chr17 76138662 Exonic hg19 NA AW028312 Out-of-frame Inter-chr q13.2 q25.3 121735 ChimerSeq ChiTaRs ChiTaRs MICAL3-PPT1 MICAL3 chr22 18410663 PPT1 chr1 40539664 Exonic hg19 NA BE837732 Out-of-frame Inter-chr q11.21 p34.2 121736 ChimerSeq ChiTaRs ChiTaRs RSL1D1-RSL1D1 RSL1D1 chr16 11935671 RSL1D1 chr16 11940634 Exonic hg19 NA AI978722 Out-of-frame Intra-chr p13.13 p13.13 121737 ChimerSeq ChiTaRs ChiTaRs MTA1-ABHD2 MTA1 chr14 105936963 ABHD2 chr15 89740471 Exonic hg19 NA AI380042 Out-of-frame Inter-chr q32.33 q26.1 121738 ChimerSeq ChiTaRs ChiTaRs DNASE2-DNASE2 DNASE2 chr19 12987065 DNASE2 chr19 12989267 Exonic hg19 NA AW610372 Out-of-frame Intra-chr p13.13 p13.13 121739 ChimerSeq ChiTaRs ChiTaRs DGAT2-DOCK4 DGAT2 chr11 75512526 DOCK4 chr7 111516955 Exonic hg19 NA CB153782 Out-of-frame Inter-chr q13.5 q31.1 121740 ChimerSeq ChiTaRs ChiTaRs IER2-NRP2 IER2 chr19 13263624 NRP2 chr2 206608172 Exonic hg19 NA BF985272 Out-of-frame Inter-chr p13.13 q33.3 121741 ChimerSeq ChiTaRs ChiTaRs ANO2-ANO2 ANO2 chr12 5714239 ANO2 chr12 5713565 Exonic hg19 NA BM718262 Out-of-frame Intra-chr p13.31 p13.31 121742 ChimerSeq ChiTaRs ChiTaRs TFCP2-TFCP2 TFCP2 chr12 51566593 TFCP2 chr12 51495737 Exonic hg19 NA BF904982 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 Transcription factor 121743 ChimerSeq ChiTaRs ChiTaRs HNRNPM-HNRNPM HNRNPM chr19 8545310 HNRNPM chr19 8544205 Exonic hg19 NA AI220112 Out-of-frame Intra-chr p13.2 p13.2 121744 ChimerSeq ChiTaRs ChiTaRs SBNO2-SMCP SBNO2 chr19 1108816 SMCP chr1 152850797 Exonic hg19 NA AK058132 CDS-5'UTR Inter-chr p13.3 q21.3 121745 ChimerSeq ChiTaRs ChiTaRs EIF2S1-STX12 EIF2S1 chr14 67831509 STX12 chr1 28149343 Exonic hg19 NA AI114762 Out-of-frame Inter-chr q23.3 p35.3 121746 ChimerSeq ChiTaRs ChiTaRs POU2F2-POU2F2 POU2F2 chr19 42605414 POU2F2 chr19 42597842 Exonic hg19 NA AI654702 Out-of-frame Intra-chr q13.2 Transcription factor q13.2 Transcription factor 121747 ChimerSeq ChiTaRs ChiTaRs MARK3-MARK3 MARK3 chr14 103946816 MARK3 chr14 103969381 Exonic hg19 NA BF356202 Out-of-frame Intra-chr q32.32 CAMK:CAMKL q32.32 CAMK:CAMKL 121748 ChimerSeq ChiTaRs ChiTaRs FREM2-QKI FREM2 chr13 39460072 QKI chr6 163992178 Exonic hg19 NA AA255532 Out-of-frame Inter-chr q13.3 q26 121749 ChimerSeq ChiTaRs ChiTaRs MYH9-JUP MYH9 chr22 36697646 JUP chr17 39846166 Exonic hg19 NA BE185392 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene q21.2 Tumor suppressor gene 121750 ChimerSeq ChiTaRs ChiTaRs DMPK-ERCC1 DMPK chr19 46282628 ERCC1 chr19 45971514 Exonic hg19 NA BF853752 Out-of-frame Intra-chr q13.32 q13.32 Oncogene 121751 ChimerSeq ChiTaRs ChiTaRs GLT25D1-MTHFD1 GLT25D1 chr19 17692709 MTHFD1 chr14 64912837 Exonic hg19 NA BG180332 Out-of-frame Inter-chr q23.3 121752 ChimerSeq ChiTaRs ChiTaRs KIAA1199-KIAA1199 KIAA1199 chr15 81228480 KIAA1199 chr15 81228483 Exonic hg19 NA AW897182 Out-of-frame Intra-chr 121753 ChimerSeq ChiTaRs ChiTaRs ANO6-PRKAB2 ANO6 chr12 45826129 PRKAB2 chr1 146626712 Exonic hg19 NA AA836812 Out-of-frame Inter-chr q12 q21.1 121754 ChimerSeq ChiTaRs ChiTaRs ST3GAL4-CAMK2G ST3GAL4 chr11 126275597 CAMK2G chr10 75574763 Exonic hg19 NA AW842632 Out-of-frame Inter-chr q24.2 q22.2 121755 ChimerSeq ChiTaRs ChiTaRs RPRD1B-ZMYM4 RPRD1B chr20 36720761 ZMYM4 chr1 35817026 Exonic hg19 NA AA626232 Out-of-frame Inter-chr q11.23 p34.3 121756 ChimerSeq ChiTaRs ChiTaRs NAP1L1-WNT7A NAP1L1 chr12 76454060 WNT7A chr3 13898310 Exonic hg19 NA BF895812 Out-of-frame Inter-chr q21.2 p25.1 Tumor suppressor gene 121757 ChimerSeq ChiTaRs ChiTaRs TAF15-DCAF8 TAF15 chr17 34171227 DCAF8 chr1 160247476 Exonic hg19 NA AI343022 Out-of-frame Inter-chr q12 q23.2 121758 ChimerSeq ChiTaRs ChiTaRs CDH5-EML1 CDH5 chr16 66437629 EML1 chr14 100295543 Exonic hg19 NA BG005262 Out-of-frame Inter-chr q21 Oncogene Tumor suppressor gene q32.2 121759 ChimerSeq ChiTaRs ChiTaRs NCOR2-RPL14 NCOR2 chr12 124979906 RPL14 chr3 40503539 Exonic hg19 NA BC051312 Out-of-frame Inter-chr q24.31 p22.1 121760 ChimerSeq ChiTaRs ChiTaRs GDE1-RANGAP1 GDE1 chr16 19520349 RANGAP1 chr22 41673534 Exonic hg19 NA AW817382 Out-of-frame Inter-chr p12.3 q13.2 121761 ChimerSeq ChiTaRs ChiTaRs HSP90B1-HSP90B1 HSP90B1 chr12 104333328 HSP90B1 chr12 104331548 Exonic hg19 NA AK025862 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene 121762 ChimerSeq ChiTaRs ChiTaRs KIAA1671-BEST1 KIAA1671 chr22 25473620 BEST1 chr11 61730296 Exonic hg19 NA BG950652 Out-of-frame Inter-chr q11.23 q12.3 121763 ChimerSeq ChiTaRs ChiTaRs UQCC-CD3EAP UQCC chr20 33970722 CD3EAP chr19 45910850 Exonic hg19 NA BG897372 Out-of-frame Inter-chr q13.32 121764 ChimerSeq ChiTaRs ChiTaRs MPDU1-TRIM15 MPDU1 chr17 7490939 TRIM15 chr6 1466061 Exonic hg19 NA BF910362 Out-of-frame Inter-chr p13.1 Tumor suppressor gene 121765 ChimerSeq ChiTaRs ChiTaRs CLEC18A-CLEC18A CLEC18A chr16 70191555 CLEC18A chr16 70190986 Exonic hg19 NA AU144432 Out-of-frame Intra-chr q22.1 q22.1 121766 ChimerSeq ChiTaRs ChiTaRs TYK2-ARRB2 TYK2 chr19 10472807 ARRB2 chr17 4620996 Exonic hg19 NA BI024982 Out-of-frame Inter-chr p13.2 TK:JakA p13.2 121767 ChimerSeq ChiTaRs ChiTaRs TMPRSS2-FKBP5 TMPRSS2 chr21 42880078 FKBP5 chr6 35558906 Exonic hg19 NA HM245390 5'UTR-CDS Inter-chr q22.3 p21.31 121768 ChimerSeq ChiTaRs ChiTaRs RBM19-HIBADH RBM19 chr12 114315587 HIBADH chr7 27693438 Exonic hg19 NA BG003402 Out-of-frame Inter-chr q24.21 p15.2 121769 ChimerSeq ChiTaRs ChiTaRs TNRC6C-ALG2 TNRC6C chr17 76101021 ALG2 chr9 101980528 Exonic hg19 NA AI371982 Out-of-frame Inter-chr q25.3 q22.33 121770 ChimerSeq ChiTaRs ChiTaRs ZBTB16-HNRNPK ZBTB16 chr11 113967313 HNRNPK chr9 86583825 Exonic hg19 NA AK126422 Out-of-frame Inter-chr q23.2 Tumor suppressor gene Transcription factor q21.32 121771 ChimerSeq ChiTaRs ChiTaRs C14orf37-FOXJ3 C14orf37 chr14 58740736 FOXJ3 chr1 42669174 Exonic hg19 NA AI214272 Out-of-frame Inter-chr q23.1 p34.2 Transcription factor 121772 ChimerSeq ChiTaRs ChiTaRs TTC7B-TTC7B TTC7B chr14 91007520 TTC7B chr14 91044600 Exonic hg19 NA BU742332 Out-of-frame Intra-chr q32.11 q32.11 121773 ChimerSeq ChiTaRs ChiTaRs APPL2-ACTN4 APPL2 chr12 105597238 ACTN4 chr19 39208640 Exonic hg19 NA BG999502 Out-of-frame Inter-chr q23.3 121774 ChimerSeq ChiTaRs ChiTaRs EFNA2-EFNA2 EFNA2 chr19 1300227 EFNA2 chr19 1295632 Exonic hg19 NA AJ007292 Out-of-frame Intra-chr p13.3 p13.3 121775 ChimerSeq ChiTaRs ChiTaRs KCNJ6-PLCL1 KCNJ6 chr21 39047182 PLCL1 chr2 198807010 Exonic hg19 NA AK058042 Out-of-frame Inter-chr q22.13 q33.1 121776 ChimerSeq ChiTaRs ChiTaRs TASP1-TASP1 TASP1 chr20 13435191 TASP1 chr20 13435348 Exonic hg19 NA BF335872 Out-of-frame Intra-chr p12.1 p12.1 121777 ChimerSeq ChiTaRs ChiTaRs TSPAN9-C14orf37 TSPAN9 chr12 3332816 C14orf37 chr14 58674668 Exonic hg19 NA AU121722 Out-of-frame Inter-chr p13.33 q23.1 121778 ChimerSeq ChiTaRs ChiTaRs CLTC-COPS8 CLTC chr17 57759778 COPS8 chr2 237996146 Exonic hg19 NA BM748992 Out-of-frame Inter-chr q23.1 q37.3 121779 ChimerSeq ChiTaRs ChiTaRs ITFG1-TRIM60 ITFG1 chr16 47252077 TRIM60 chr4 165962407 Exonic hg19 NA AI867902 Out-of-frame Inter-chr q12.1 q32.3 121780 ChimerSeq ChiTaRs ChiTaRs USP3-USP3 USP3 chr15 63845989 USP3 chr15 63855094 Exonic hg19 NA BE080252 Out-of-frame Intra-chr q22.31 q22.31 121781 ChimerSeq ChiTaRs ChiTaRs AES-AES AES chr19 3053448 AES chr19 3056335 Exonic hg19 NA AI358002 Out-of-frame Intra-chr p13.3 p13.3 121782 ChimerSeq ChiTaRs ChiTaRs PSME2-RAB10 PSME2 chr14 24615821 RAB10 chr2 26298749 Exonic hg19 NA AW997232 Out-of-frame Inter-chr q12 p23.3 121783 ChimerSeq ChiTaRs ChiTaRs SERPINF2-HPS3 SERPINF2 chr17 1646215 HPS3 chr3 148890707 Exonic hg19 NA BG564112 Out-of-frame Inter-chr p13.3 q24 121784 ChimerSeq ChiTaRs ChiTaRs EHD4-EHD4 EHD4 chr15 42192171 EHD4 chr15 42191641 Exonic hg19 NA AA287002 Out-of-frame Intra-chr q15.1 q15.1 121785 ChimerSeq ChiTaRs ChiTaRs TPD52L2-TPD52L2 TPD52L2 chr20 62522402 TPD52L2 chr20 62508909 Exonic hg19 NA DA103662 Out-of-frame Intra-chr q13.33 q13.33 121786 ChimerSeq ChiTaRs ChiTaRs LRTOMT-LRTOMT LRTOMT chr11 71808899 LRTOMT chr11 71808344 Exonic hg19 NA BE877022 Out-of-frame Intra-chr q13.4 q13.4 121787 ChimerSeq ChiTaRs ChiTaRs USP30-USP30 USP30 chr12 109523573 USP30 chr12 109522795 Exonic hg19 NA BQ327062 Out-of-frame Intra-chr q24.11 q24.11 121788 ChimerSeq ChiTaRs ChiTaRs PEBP1-PEBP1 PEBP1 chr12 118582991 PEBP1 chr12 118582623 Exonic hg19 NA BU622182 Out-of-frame Intra-chr q24.23 Tumor suppressor gene q24.23 Tumor suppressor gene 121789 ChimerSeq ChiTaRs ChiTaRs SENP1-SENP1 SENP1 chr12 48488030 SENP1 chr12 48482479 Exonic hg19 NA BU681052 Out-of-frame Intra-chr q13.11 q13.11 121790 ChimerSeq ChiTaRs ChiTaRs PGPEP1-FKBP8 PGPEP1 chr19 18474512 FKBP8 chr19 18642573 Exonic hg19 NA AK026952 Out-of-frame Intra-chr p13.11 p13.11 121791 ChimerSeq ChiTaRs ChiTaRs TSNAXIP1-GPSM1 TSNAXIP1 chr16 67861970 GPSM1 chr9 139244244 Exonic hg19 NA AI286092 Out-of-frame Inter-chr q22.1 q34.3 121792 ChimerSeq ChiTaRs ChiTaRs NPEPPS-NPEPPS NPEPPS chr17 45679343 NPEPPS chr17 45673738 Exonic hg19 NA CB851452 Out-of-frame Intra-chr q21.32 q21.32 121793 ChimerSeq ChiTaRs ChiTaRs ATF7IP-ATP6V0E1 ATF7IP chr12 14577524 ATP6V0E1 chr5 172449017 Exonic hg19 NA BE077232 Out-of-frame Inter-chr p13.1 q35.1 121794 ChimerSeq ChiTaRs ChiTaRs ZDHHC24-SLC27A1 ZDHHC24 chr11 66310383 SLC27A1 chr19 17615616 Exonic hg19 NA BI009992 Out-of-frame Inter-chr q13.2 p13.11 121795 ChimerSeq ChiTaRs ChiTaRs EML2-MAN1A2 EML2 chr19 46129161 MAN1A2 chr1 117986828 Exonic hg19 NA BG000012 Out-of-frame Inter-chr q13.32 p12 121796 ChimerSeq ChiTaRs ChiTaRs USP32-USP32 USP32 chr17 58371644 USP32 chr17 58371661 Exonic hg19 NA AA557922 Out-of-frame Intra-chr q23.2 q23.2 121797 ChimerSeq ChiTaRs ChiTaRs GTPBP1-GTPBP1 GTPBP1 chr22 39127521 GTPBP1 chr22 39127494 Exonic hg19 NA AA216382 Out-of-frame Intra-chr q13.1 q13.1 121798 ChimerSeq ChiTaRs ChiTaRs FAM214A-CCNDBP1 FAM214A chr15 52949607 CCNDBP1 chr15 43478132 Exonic hg19 NA DA365902 Out-of-frame Intra-chr q21.3 q15.2 Tumor suppressor gene 121799 ChimerSeq ChiTaRs ChiTaRs ZNF532-ZNF532 ZNF532 chr18 56587865 ZNF532 chr18 56585503 Exonic hg19 NA CD695642 Out-of-frame Intra-chr q21.32 Transcription factor q21.32 Transcription factor 121800 ChimerSeq ChiTaRs ChiTaRs RAB11A-RAB11A RAB11A chr15 66180422 RAB11A chr15 66170114 Exonic hg19 NA BU608612 Out-of-frame Intra-chr q22.31 q22.31 121801 ChimerSeq ChiTaRs ChiTaRs DIP2B-DIP2B DIP2B chr12 50928530 DIP2B chr12 50924171 Exonic hg19 NA CV336522 Out-of-frame Intra-chr q13.12 q13.12 121802 ChimerSeq ChiTaRs ChiTaRs TICAM1-TICAM1 TICAM1 chr19 4818222 TICAM1 chr19 4817376 Exonic hg19 NA CR975712 Out-of-frame Intra-chr p13.3 p13.3 121803 ChimerSeq ChiTaRs ChiTaRs KRT4-KRT4 KRT4 chr12 53200470 KRT4 chr12 53200638 Exonic hg19 NA AW265272 Out-of-frame Intra-chr q13.13 q13.13 121804 ChimerSeq ChiTaRs ChiTaRs PTPN6-PTPN6 PTPN6 chr12 7065630 PTPN6 chr12 7064352 Exonic hg19 NA BF762332 Out-of-frame Intra-chr p13.31 Tumor suppressor gene p13.31 Tumor suppressor gene 121805 ChimerSeq ChiTaRs ChiTaRs SPATA8-PDE3B SPATA8 chr15 97328836 PDE3B chr11 14666396 Exonic hg19 NA AI651372 Out-of-frame Inter-chr q26.2 p15.2 121806 ChimerSeq ChiTaRs ChiTaRs RBFOX2-CAPZA1 RBFOX2 chr22 36155923 CAPZA1 chr1 113204525 Exonic hg19 NA BF763422 Out-of-frame Inter-chr p13.2 121807 ChimerSeq ChiTaRs ChiTaRs MOB3A-MOB3A MOB3A chr19 2083296 MOB3A chr19 2085292 Exonic hg19 NA CK906242 Out-of-frame Intra-chr p13.3 p13.3 121808 ChimerSeq ChiTaRs ChiTaRs CASC3-CASC3 CASC3 chr17 38327938 CASC3 chr17 38327907 Exonic hg19 NA AA190703 Out-of-frame Intra-chr q21.1 q21.1 121809 ChimerSeq ChiTaRs ChiTaRs KTN1-KTN1 KTN1 chr14 56146306 KTN1 chr14 56146294 Exonic hg19 NA AA526623 Out-of-frame Intra-chr q22.3 q22.3 121810 ChimerSeq ChiTaRs ChiTaRs PCK1-PCK1 PCK1 chr20 56141455 PCK1 chr20 56141152 Exonic hg19 NA AA484533 Out-of-frame Intra-chr q13.31 q13.31 121811 ChimerSeq ChiTaRs ChiTaRs HDAC10-SNRNP70 HDAC10 chr22 50684407 SNRNP70 chr19 49610498 Exonic hg19 NA AA425383 Out-of-frame Inter-chr q13.33 q13.33 121812 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65267790 MALAT1 chr11 65267785 Exonic hg19 NA AA569443 Out-of-frame Intra-chr q13.1 q13.1 121813 ChimerSeq ChiTaRs ChiTaRs TMCO3-GNGT1 TMCO3 chr13 114204542 GNGT1 chr7 93516068 Exonic hg19 NA AA303013 Out-of-frame Inter-chr q34 q21.3 121814 ChimerSeq ChiTaRs ChiTaRs UPF1-UPF1 UPF1 chr19 18979030 UPF1 chr19 18978691 Exonic hg19 NA AA532713 Out-of-frame Intra-chr p13.11 p13.11 121815 ChimerSeq ChiTaRs ChiTaRs MIDN-TM4SF1 MIDN chr19 1259080 TM4SF1 chr3 149093530 Exonic hg19 NA AA155623 Out-of-frame Inter-chr p13.3 q25.1 121816 ChimerSeq ChiTaRs ChiTaRs MLEC-MLEC MLEC chr12 121139364 MLEC chr12 121139418 Exonic hg19 NA AA244053 Out-of-frame Intra-chr q24.31 q24.31 121817 ChimerSeq ChiTaRs ChiTaRs DDX17-DDX17 DDX17 chr22 38879669 DDX17 chr22 38879667 Exonic hg19 NA AA603833 Out-of-frame Intra-chr q13.1 q13.1 121818 ChimerSeq ChiTaRs ChiTaRs TSC22D1-TSC22D1 TSC22D1 chr13 45008054 TSC22D1 chr13 45007668 Exonic hg19 NA AA532503 Out-of-frame Intra-chr q14.11 Tumor suppressor gene Transcription factor q14.11 Tumor suppressor gene Transcription factor 121819 ChimerSeq ChiTaRs ChiTaRs RECQL5-RECQL5 RECQL5 chr17 73623532 RECQL5 chr17 73623526 Exonic hg19 NA AA577933 Out-of-frame Intra-chr q25.1 q25.1 121820 ChimerSeq ChiTaRs ChiTaRs LTBP3-LTBP3 LTBP3 chr11 65310933 LTBP3 chr11 65318898 Exonic hg19 NA AA368933 Out-of-frame Intra-chr q13.1 q13.1 121821 ChimerSeq ChiTaRs ChiTaRs DMPK-DMPK DMPK chr19 46280657 DMPK chr19 46275041 Exonic hg19 NA AA065313 Out-of-frame Intra-chr q13.32 q13.32 121822 ChimerSeq ChiTaRs ChiTaRs DHX8-DHX8 DHX8 chr17 41601461 DHX8 chr17 41598748 Exonic hg19 NA AA347223 Out-of-frame Intra-chr q21.31 q21.31 121823 ChimerSeq ChiTaRs ChiTaRs FMNL3-REPS1 FMNL3 chr12 50038786 REPS1 chr6 139237068 Exonic hg19 NA AA557223 Out-of-frame Inter-chr q13.12 q24.1 121824 ChimerSeq ChiTaRs ChiTaRs LTBP2-LTBP2 LTBP2 chr14 74966555 LTBP2 chr14 74966257 Exonic hg19 NA AA382523 Out-of-frame Intra-chr q24.3 q24.3 121825 ChimerSeq ChiTaRs ChiTaRs AES-AEBP2 AES chr19 3053633 AEBP2 chr12 19606894 Exonic hg19 NA AA453443 Out-of-frame Inter-chr p13.3 p12.3 Transcription factor 121826 ChimerSeq ChiTaRs ChiTaRs CBFA2T2-CBFA2T2 CBFA2T2 chr20 32154118 CBFA2T2 chr20 32152985 Exonic hg19 NA AA323513 Out-of-frame Intra-chr q11.21 q11.21 121827 ChimerSeq ChiTaRs ChiTaRs GTPBP1-TAF1D GTPBP1 chr22 39129592 TAF1D chr11 93471557 Exonic hg19 NA AA648423 3'UTR-CDS Inter-chr q13.1 q21 121828 ChimerSeq ChiTaRs ChiTaRs DLK1-RPS11 DLK1 chr14 101201371 RPS11 chr19 50000561 Exonic hg19 NA AA368503 Out-of-frame Inter-chr q32.2 Tumor suppressor gene q13.33 121829 ChimerSeq ChiTaRs ChiTaRs FBRSL1-MARS FBRSL1 chr12 133147703 MARS chr12 57909054 Exonic hg19 NA AA345023 Out-of-frame Intra-chr q24.33 q13.3 121830 ChimerSeq ChiTaRs ChiTaRs PVRL2-RAD51B PVRL2 chr19 45382193 RAD51B chr14 69024147 Exonic hg19 NA AA514833 Out-of-frame Inter-chr q24.1 121831 ChimerSeq ChiTaRs ChiTaRs SYN3-GRAPL SYN3 chr22 33429368 GRAPL chr17 19059801 Exonic hg19 NA DQ376080 Out-of-frame Inter-chr q12.3 p11.2 121832 ChimerSeq ChiTaRs ChiTaRs RANBP1-C22orf43 RANBP1 chr22 20114687 C22orf43 chr22 23960184 Exonic hg19 NA AA300873 Out-of-frame Intra-chr q11.21 121833 ChimerSeq ChiTaRs ChiTaRs ASNA1-PAF1 ASNA1 chr19 12859137 PAF1 chr19 39880146 Exonic hg19 NA AA236423 3'UTR-3'UTR Intra-chr p13.13 q13.2 121834 ChimerSeq ChiTaRs ChiTaRs LRP5L-LOC653501 LRP5L chr22 25752886 LOC653501 chr9 39449068 Exonic hg19 NA AA490283 Out-of-frame Inter-chr q11.23 121835 ChimerSeq ChiTaRs ChiTaRs PANX1-PANX1 PANX1 chr11 93867488 PANX1 chr11 93867480 Exonic hg19 NA AA470573 Out-of-frame Intra-chr q21 q21 121836 ChimerSeq ChiTaRs ChiTaRs RBM14-RBM4-RBM14-RBM4 RBM14-RBM4 chr11 66413939 RBM14-RBM4 chr11 66413534 Exonic hg19 NA AA188793 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 Tumor suppressor gene 121837 ChimerSeq ChiTaRs ChiTaRs FAT3-ACOX1 FAT3 chr11 92491030 ACOX1 chr17 73971593 Exonic hg19 NA AA174053 Out-of-frame Inter-chr q25.1 121838 ChimerSeq ChiTaRs ChiTaRs SEMA4B-SEMA4B SEMA4B chr15 90772892 SEMA4B chr15 90772628 Exonic hg19 NA AA534183 3'UTR-3'UTR Intra-chr q26.1 q26.1 121839 ChimerSeq ChiTaRs ChiTaRs NADSYN1-NADSYN1 NADSYN1 chr11 71212578 NADSYN1 chr11 71209399 Exonic hg19 NA AA469253 Out-of-frame Intra-chr q13.4 q13.4 121840 ChimerSeq ChiTaRs ChiTaRs DICER1-NEK7 DICER1 chr14 95556396 NEK7 chr1 198240818 Exonic hg19 NA AA248863 Out-of-frame Inter-chr q32.13 Oncogene Tumor suppressor gene q31.3 Other:NEK 121841 ChimerSeq ChiTaRs ChiTaRs DIS3L-CBX3 DIS3L chr15 66624959 CBX3 chr7 26252224 Exonic hg19 NA AA365643 Out-of-frame Inter-chr q22.31 p15.2 121842 ChimerSeq ChiTaRs ChiTaRs REXO2-SARM1 REXO2 chr11 114320999 SARM1 chr17 26714392 Exonic hg19 NA AA508773 Out-of-frame Inter-chr q23.2 q11.2 121843 ChimerSeq ChiTaRs ChiTaRs HYOU1-HYOU1 HYOU1 chr11 118921812 HYOU1 chr11 118922570 Exonic hg19 NA AA356643 Out-of-frame Intra-chr 121844 ChimerSeq ChiTaRs ChiTaRs TMEM170A-TMEM170A TMEM170A chr16 75479644 TMEM170A chr16 75479639 Exonic hg19 NA AA225763 Out-of-frame Intra-chr q23.1 q23.1 121845 ChimerSeq ChiTaRs ChiTaRs RPL38-DST RPL38 chr17 72206019 DST chr6 56328425 Exonic hg19 NA AA017134 3'UTR-3'UTR Inter-chr q25.1 p12.1 Oncogene 121846 ChimerSeq ChiTaRs ChiTaRs PEMT-SCNN1A PEMT chr17 17427066 SCNN1A chr12 6457185 Exonic hg19 NA AA035445 Out-of-frame Inter-chr p11.2 p13.31 121847 ChimerSeq ChiTaRs ChiTaRs COL1A1-COL1A1 COL1A1 chr17 48261707 COL1A1 chr17 48261854 Exonic hg19 NA AA046884 Out-of-frame Intra-chr q21.33 Oncogene q21.33 Oncogene 121848 ChimerSeq ChiTaRs ChiTaRs ZFP1-NKTR ZFP1 chr16 75206132 NKTR chr3 42688508 Exonic hg19 NA AA047834 3'UTR-3'UTR Inter-chr q23.1 Transcription factor p22.1 121849 ChimerSeq ChiTaRs ChiTaRs SEC23A-ARL11 SEC23A chr14 39533332 ARL11 chr13 50205498 Exonic hg19 NA AA057305 Out-of-frame Inter-chr q21.1 q14.2 Tumor suppressor gene 121850 ChimerSeq ChiTaRs ChiTaRs GAS6-GAS6 GAS6 chr13 114523763 GAS6 chr13 114523720 Exonic hg19 NA AA057674 Out-of-frame Intra-chr q34 Oncogene q34 Oncogene 121851 ChimerSeq ChiTaRs ChiTaRs FAU-CNOT2 FAU chr11 64888154 CNOT2 chr12 70747715 Exonic hg19 NA AA071465 Out-of-frame Inter-chr q13.1 q15 121852 ChimerSeq ChiTaRs ChiTaRs CD63-VPS35 CD63 chr12 56119351 VPS35 chr16 46694331 Exonic hg19 NA AA083694 Out-of-frame Inter-chr q13.2 q11.2 121853 ChimerSeq ChiTaRs ChiTaRs SF3B3-SF3B3 SF3B3 chr16 70601334 SF3B3 chr16 70601327 Exonic hg19 NA AA135074 Out-of-frame Intra-chr q22.1 q22.1 121854 ChimerSeq ChiTaRs ChiTaRs PLEKHJ1-PAPSS2 PLEKHJ1 chr19 2233290 PAPSS2 chr10 89506245 Exonic hg19 NA AA149744 Out-of-frame Inter-chr p13.3 q23.2 121855 ChimerSeq ChiTaRs ChiTaRs CNTD1-BECN1 CNTD1 chr17 40963699 BECN1 chr17 40963699 Exonic hg19 NA AA158625 Out-of-frame Intra-chr q21.2 q21.31 Tumor suppressor gene 121856 ChimerSeq ChiTaRs ChiTaRs KAT8-KAT8 KAT8 chr16 31141859 KAT8 chr16 31139373 Exonic hg19 NA AA159555 Out-of-frame Intra-chr p11.2 p11.2 121857 ChimerSeq ChiTaRs ChiTaRs ZNF664-TRIM25 ZNF664 chr12 124496396 TRIM25 chr17 54965999 Exonic hg19 NA AA189065 Out-of-frame Inter-chr q24.31 Transcription factor q22 121858 ChimerSeq ChiTaRs ChiTaRs KLC1-APOPT1 KLC1 chr14 104060247 APOPT1 chr14 104057084 Exonic hg19 NA AA227534 Out-of-frame Intra-chr q32.33 q32.33 Seq+ 121859 ChimerSeq ChiTaRs ChiTaRs PIP4K2B-PIP4K2B PIP4K2B chr17 36922301 PIP4K2B chr17 36935745 Exonic hg19 NA AA247774 Out-of-frame Intra-chr q12 q12 121860 ChimerSeq ChiTaRs ChiTaRs TMEM170A-TMEM170A TMEM170A chr16 75479808 TMEM170A chr16 75479503 Exonic hg19 NA AA259184 Out-of-frame Intra-chr q23.1 q23.1 121861 ChimerSeq ChiTaRs ChiTaRs STX8-AKAP13 STX8 chr17 9471788 AKAP13 chr15 86079244 Exonic hg19 NA AA304655 Out-of-frame Inter-chr p13.1 q25.3 121862 ChimerSeq ChiTaRs ChiTaRs MPDU1-MPDU1 MPDU1 chr17 7494290 MPDU1 chr17 7493883 Exonic hg19 NA AA346855 Out-of-frame Intra-chr p13.1 p13.1 121863 ChimerSeq ChiTaRs ChiTaRs PRMT2-PRMT2 PRMT2 chr21 48069583 PRMT2 chr21 48056396 Exonic hg19 NA AA348224 Out-of-frame Intra-chr q22.3 q22.3 121864 ChimerSeq ChiTaRs ChiTaRs LOC284454-LOC284454 LOC284454 chr19 13946868 LOC284454 chr19 13947160 Exonic hg19 NA AA362215 Out-of-frame Intra-chr 121865 ChimerSeq ChiTaRs ChiTaRs NPIPB7-TMOD2 NPIPB7 chr16 29167965 TMOD2 chr15 52059826 Exonic hg19 NA AA367625 Out-of-frame Inter-chr p12.1 q21.2 121866 ChimerSeq ChiTaRs ChiTaRs COL1A1-ELL2 COL1A1 chr17 48261921 ELL2 chr5 95221346 Exonic hg19 NA AA368274 Out-of-frame Inter-chr q21.33 Oncogene q15 121867 ChimerSeq ChiTaRs ChiTaRs TIMP2-FLT4 TIMP2 chr17 76849995 FLT4 chr5 180052936 Exonic hg19 NA AA368924 Out-of-frame Inter-chr q25.3 q35.3 TK:VEGFR Oncogene 121868 ChimerSeq ChiTaRs ChiTaRs SERPINF1-SERPINF1 SERPINF1 chr17 1680662 SERPINF1 chr17 1680635 Exonic hg19 NA AA377954 Out-of-frame Intra-chr 121869 ChimerSeq ChiTaRs ChiTaRs RTL1-ATN1 RTL1 chr14 101347599 ATN1 chr12 7045930 Exonic hg19 NA AA378254 Out-of-frame Inter-chr q32.2 p13.31 121870 ChimerSeq ChiTaRs ChiTaRs CRIP2-KIF20B CRIP2 chr14 105946498 KIF20B chr10 91497913 Exonic hg19 NA AA402625 Out-of-frame Inter-chr q32.33 q23.31 121871 ChimerSeq ChiTaRs ChiTaRs YTHDF1-YTHDF1 YTHDF1 chr20 61834549 YTHDF1 chr20 61834606 Exonic hg19 NA AA405604 Out-of-frame Intra-chr q13.33 q13.33 121872 ChimerSeq ChiTaRs ChiTaRs RBFOX2-RBFOX2 RBFOX2 chr22 36140233 RBFOX2 chr22 36139262 Exonic hg19 NA AA417914 Out-of-frame Intra-chr 121873 ChimerSeq ChiTaRs ChiTaRs NEFH-NEFH NEFH chr22 29886097 NEFH chr22 29877341 Exonic hg19 NA AA425515 Out-of-frame Intra-chr q12.2 q12.2 121874 ChimerSeq ChiTaRs ChiTaRs GPR108-PDE4A GPR108 chr19 6733650 PDE4A chr19 10578350 Exonic hg19 NA AA432285 Out-of-frame Intra-chr p13.3 p13.2 121875 ChimerSeq ChiTaRs ChiTaRs CPSF6-CPSF6 CPSF6 chr12 69653868 CPSF6 chr12 69653862 Exonic hg19 NA AA442135 Out-of-frame Intra-chr q15 q15 121876 ChimerSeq ChiTaRs ChiTaRs TACO1-TACO1 TACO1 chr17 61683681 TACO1 chr17 61682400 Exonic hg19 NA AA447355 Out-of-frame Intra-chr q23.3 q23.3 121877 ChimerSeq ChiTaRs ChiTaRs NEDD4-ARMCX3 NEDD4 chr15 56195293 ARMCX3 chrX 100881405 Exonic hg19 NA AA449165 Out-of-frame Inter-chr q21.3 Tumor suppressor gene q22.1 121878 ChimerSeq ChiTaRs ChiTaRs NFRKB-NFRKB NFRKB chr11 129737672 NFRKB chr11 129738394 Exonic hg19 NA AA456494 Out-of-frame Intra-chr q24.3 q24.3 121879 ChimerSeq ChiTaRs ChiTaRs MEG3-PDZD2 MEG3 chr14 101298752 PDZD2 chr5 31918427 Exonic hg19 NA AA463835 Out-of-frame Inter-chr q32.2 Tumor suppressor gene p13.3 121880 ChimerSeq ChiTaRs ChiTaRs MAP2K1-PDK2 MAP2K1 chr15 66699661 PDK2 chr17 48188189 Exonic hg19 NA AA478915 Out-of-frame Inter-chr q22.31 STE:STE7 Oncogene q21.33 121881 ChimerSeq ChiTaRs ChiTaRs NDE1-REG3A NDE1 chr16 15797411 REG3A chr2 79385830 Exonic hg19 NA AA494454 Out-of-frame Inter-chr p13.11 p12 121882 ChimerSeq ChiTaRs ChiTaRs NF1-NF1 NF1 chr17 29704693 NF1 chr17 29704353 Exonic hg19 NA AA496924 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 Oncogene Tumor suppressor gene 121883 ChimerSeq ChiTaRs ChiTaRs OXA1L-RPL27 OXA1L chr14 23240992 RPL27 chr17 41150760 Exonic hg19 NA AA503644 Out-of-frame Inter-chr q11.2 q21.31 121884 ChimerSeq ChiTaRs ChiTaRs PLCD3-SNRPF PLCD3 chr17 43189143 SNRPF chr12 96258132 Exonic hg19 NA AA506495 Out-of-frame Inter-chr q21.31 q23.1 121885 ChimerSeq ChiTaRs ChiTaRs TAGLN-TAGLN TAGLN chr11 117075268 TAGLN chr11 117075279 Exonic hg19 NA AA508504 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene 121886 ChimerSeq ChiTaRs ChiTaRs ZNF276-ZNF282 ZNF276 chr16 89806250 ZNF282 chr7 148922515 Exonic hg19 NA AA513395 Out-of-frame Inter-chr q24.3 Transcription factor q36.1 Transcription factor 121887 ChimerSeq ChiTaRs ChiTaRs RPL18-NFE2L2 RPL18 chr19 49118641 NFE2L2 chr2 178095254 Exonic hg19 NA AA516125 Out-of-frame Inter-chr q13.33 q31.2 Oncogene Transcription factor 121888 ChimerSeq ChiTaRs ChiTaRs RIOK3-RIOK3 RIOK3 chr18 21044780 RIOK3 chr18 21044729 Exonic hg19 NA AA522934 Out-of-frame Intra-chr q11.2 Atypical:RIO q11.2 Atypical:RIO 121889 ChimerSeq ChiTaRs ChiTaRs ARF3-ARF3 ARF3 chr12 49331892 ARF3 chr12 49331514 Exonic hg19 NA AA527815 Out-of-frame Intra-chr q13.12 q13.12 121890 ChimerSeq ChiTaRs ChiTaRs HNRNPUL1-RAP2B HNRNPUL1 chr19 41813524 RAP2B chr3 152881560 Exonic hg19 NA AA534555 Out-of-frame Inter-chr q13.2 q25.2 121891 ChimerSeq ChiTaRs ChiTaRs BSG-BSG BSG chr19 583290 BSG chr19 583296 Exonic hg19 NA AA535665 Out-of-frame Intra-chr p13.3 p13.3 121892 ChimerSeq ChiTaRs ChiTaRs GSTP1-CTSA GSTP1 chr11 67354124 CTSA chr20 44522645 Exonic hg19 NA AA535995 3'UTR-CDS Inter-chr q13.2 Tumor suppressor gene q13.12 121893 ChimerSeq ChiTaRs ChiTaRs EMP2-EMP2 EMP2 chr16 10622725 EMP2 chr16 10622439 Exonic hg19 NA AA552814 Out-of-frame Intra-chr p13.13 Tumor suppressor gene p13.13 Tumor suppressor gene 121894 ChimerSeq ChiTaRs ChiTaRs ZNF652-ZNF652 ZNF652 chr17 47367078 ZNF652 chr17 47367034 Exonic hg19 NA AA557495 Out-of-frame Intra-chr q21.33 Transcription factor q21.33 Transcription factor 121895 ChimerSeq ChiTaRs ChiTaRs FAIM2-FAIM2 FAIM2 chr12 50261216 FAIM2 chr12 50260678 Exonic hg19 NA AA564475 3'UTR-CDS Intra-chr q13.12 q13.12 121896 ChimerSeq ChiTaRs ChiTaRs SPG7-MALAT1 SPG7 chr16 89586860 MALAT1 chr11 65266526 Exonic hg19 NA AA574455 Out-of-frame Inter-chr q24.3 q13.1 121897 ChimerSeq ChiTaRs ChiTaRs DDX17-DDX17 DDX17 chr22 38879517 DDX17 chr22 38879513 Exonic hg19 NA AA579394 Out-of-frame Intra-chr q13.1 q13.1 121898 ChimerSeq ChiTaRs ChiTaRs TSC22D1-TSC22D1 TSC22D1 chr13 45008184 TSC22D1 chr13 45007953 Exonic hg19 NA AA592994 Out-of-frame Intra-chr q14.11 Tumor suppressor gene Transcription factor q14.11 Tumor suppressor gene Transcription factor 121899 ChimerSeq ChiTaRs ChiTaRs NUP85-NUP85 NUP85 chr17 73227434 NUP85 chr17 73229033 Exonic hg19 NA AA593414 Out-of-frame Intra-chr q25.1 q25.1 121900 ChimerSeq ChiTaRs ChiTaRs NOC4L-FAM129A NOC4L chr12 132637013 FAM129A chr1 184761637 Exonic hg19 NA AA595354 Out-of-frame Inter-chr q24.33 q25.3 121901 ChimerSeq ChiTaRs ChiTaRs PPFIBP1-PPFIBP1 PPFIBP1 chr12 27848497 PPFIBP1 chr12 27848422 Exonic hg19 NA AA599004 3'UTR-3'UTR Intra-chr p11.23 p11.23 121902 ChimerSeq ChiTaRs ChiTaRs ZZEF1-ZZEF1 ZZEF1 chr17 3920706 ZZEF1 chr17 3920745 Exonic hg19 NA AA602705 Out-of-frame Intra-chr p13.2 p13.2 121903 ChimerSeq ChiTaRs ChiTaRs FKBP4-PMVK FKBP4 chr12 2913105 PMVK chr1 154897522 Exonic hg19 NA AA603694 Out-of-frame Inter-chr p13.33 q21.3 121904 ChimerSeq ChiTaRs ChiTaRs RPL13AP20-DYNC1H1 RPL13AP20 chr12 13029091 DYNC1H1 chr14 102476245 Exonic hg19 NA AA604875 Out-of-frame Inter-chr p13.1 q32.31 121905 ChimerSeq ChiTaRs ChiTaRs SLC25A3-SLC25A3 SLC25A3 chr12 98995486 SLC25A3 chr12 98995230 Exonic hg19 NA AA618165 Out-of-frame Intra-chr q23.1 q23.1 121906 ChimerSeq ChiTaRs ChiTaRs HOXB13-ACTG2 HOXB13 chr17 46805865 ACTG2 chr2 74120150 Exonic hg19 NA AA622384 Out-of-frame Inter-chr q21.32 Tumor suppressor gene Transcription factor p13.1 121907 ChimerSeq ChiTaRs ChiTaRs CDAN1-UBTD2 CDAN1 chr15 43015964 UBTD2 chr5 171699448 Exonic hg19 NA AA628395 Out-of-frame Inter-chr q15.2 q35.1 121908 ChimerSeq ChiTaRs ChiTaRs CSRNP2-CSRNP2 CSRNP2 chr12 51455784 CSRNP2 chr12 51455469 Exonic hg19 NA AA640534 Out-of-frame Intra-chr q13.12 Transcription factor q13.12 Transcription factor 121909 ChimerSeq ChiTaRs ChiTaRs MED4-STAT5A MED4 chr13 48650838 STAT5A chr17 40457623 Exonic hg19 NA AA642514 Out-of-frame Inter-chr q14.2 q21.2 Tumor suppressor gene Transcription factor 121910 ChimerSeq ChiTaRs ChiTaRs UBE4A-UBE4A UBE4A chr11 118269839 UBE4A chr11 118269832 Exonic hg19 NA AA642795 Out-of-frame Intra-chr q23.3 q23.3 121911 ChimerSeq ChiTaRs ChiTaRs EFNB2-EFNB2 EFNB2 chr13 107164729 EFNB2 chr13 107175439 Exonic hg19 NA AA643584 Out-of-frame Intra-chr q33.3 q33.3 121912 ChimerSeq ChiTaRs ChiTaRs CALM1-CALM1 CALM1 chr14 90871892 CALM1 chr14 90871685 Exonic hg19 NA AA652945 Out-of-frame Intra-chr q32.11 q32.11 121913 ChimerSeq ChiTaRs ChiTaRs PGP-AUTS2 PGP chr16 2263753 AUTS2 chr7 69645460 Exonic hg19 NA AA653505 Out-of-frame Inter-chr p13.3 q11.22 121914 ChimerSeq ChiTaRs ChiTaRs DLGAP1-LGR4 DLGAP1 chr18 4399199 LGR4 chr11 27484166 Exonic hg19 NA AA682974 Out-of-frame Inter-chr p11.31 p14.1 121915 ChimerSeq ChiTaRs ChiTaRs NFAT5-NFAT5 NFAT5 chr16 69724228 NFAT5 chr16 69725886 Exonic hg19 NA AA694235 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Transcription factor 121916 ChimerSeq ChiTaRs ChiTaRs GNG7-SLC26A1 GNG7 chr19 2515019 SLC26A1 chr4 979024 Exonic hg19 NA AA701654 Out-of-frame Inter-chr p13.3 p16.3 121917 ChimerSeq ChiTaRs ChiTaRs CD4-PTPN11 CD4 chr12 6929964 PTPN11 chr12 112945381 Exonic hg19 NA AA722635 Out-of-frame Intra-chr p13.31 Tumor suppressor gene q24.13 Oncogene Tumor suppressor gene 121918 ChimerSeq ChiTaRs ChiTaRs BRWD1-CTDNEP1 BRWD1 chr21 40669062 CTDNEP1 chr17 7149622 Exonic hg19 NA AA723224 Out-of-frame Inter-chr q22.2 p13.1 121919 ChimerSeq ChiTaRs ChiTaRs CHGA-CHGA CHGA chr14 93401638 CHGA chr14 93399121 Exonic hg19 NA AA724235 3'UTR-CDS Intra-chr q32.12 q32.12 121920 ChimerSeq ChiTaRs ChiTaRs FKBP8-LIG4 FKBP8 chr19 18642910 LIG4 chr13 108867019 Exonic hg19 NA AA732934 Out-of-frame Inter-chr p13.11 q33.3 121921 ChimerSeq ChiTaRs ChiTaRs KIF3B-KIF3B KIF3B chr20 30922791 KIF3B chr20 30922348 Exonic hg19 NA AA740234 Out-of-frame Intra-chr q11.21 q11.21 121922 ChimerSeq ChiTaRs ChiTaRs STAT2-STAT2 STAT2 chr12 56735493 STAT2 chr12 56735485 Exonic hg19 NA AA745575 Out-of-frame Intra-chr q13.3 Transcription factor q13.3 Transcription factor 121923 ChimerSeq ChiTaRs ChiTaRs APLP2-AFAP1L1 APLP2 chr11 130013692 AFAP1L1 chr5 148709284 Exonic hg19 NA AA778105 Out-of-frame Inter-chr q24.3 q32 121924 ChimerSeq ChiTaRs ChiTaRs TNFSF9-ST8SIA6 TNFSF9 chr19 6536075 ST8SIA6 chr10 17432093 Exonic hg19 NA AA780464 Out-of-frame Inter-chr p13.3 Tumor suppressor gene p12.33 121925 ChimerSeq ChiTaRs ChiTaRs CSAD-CSAD CSAD chr12 53573639 CSAD chr12 53569389 Exonic hg19 NA AA805355 Out-of-frame Intra-chr q13.13 q13.13 121926 ChimerSeq ChiTaRs ChiTaRs SNAP23-BAZ2A SNAP23 chr15 42824748 BAZ2A chr12 57003085 Exonic hg19 NA AA830385 Out-of-frame Inter-chr q15.1 q13.3 Transcription factor 121927 ChimerSeq ChiTaRs ChiTaRs DEPDC5-ENY2 DEPDC5 chr22 32287212 ENY2 chr8 110348356 Exonic hg19 NA AA838174 CDS-5'UTR Inter-chr q12.2 q23.1 121928 ChimerSeq ChiTaRs ChiTaRs ARL17A-ARL17A ARL17A chr17 619875 ARL17A chr17 619683 Exonic hg19 NA AA847265 Out-of-frame Intra-chr q21.31 q21.31 121929 ChimerSeq ChiTaRs ChiTaRs MIDN-MIDN MIDN chr19 1258639 MIDN chr19 1258098 Exonic hg19 NA AA883525 Out-of-frame Intra-chr p13.3 p13.3 121930 ChimerSeq ChiTaRs ChiTaRs NAA20-TBC1D32 NAA20 chr20 20014560 TBC1D32 chr6 121428950 Exonic hg19 NA AA884005 Out-of-frame Inter-chr p11.23 q22.31 121931 ChimerSeq ChiTaRs ChiTaRs GSK3A-PWP1 GSK3A chr19 42734626 PWP1 chr12 108082549 Exonic hg19 NA AA885364 Out-of-frame Inter-chr q13.2 CMGC:GSK q23.3 121932 ChimerSeq ChiTaRs ChiTaRs RTDR1-SORCS2 RTDR1 chr22 23467219 SORCS2 chr4 7675340 Exonic hg19 NA AA894535 Out-of-frame Inter-chr p16.1 121933 ChimerSeq ChiTaRs ChiTaRs SRP68-PARP1 SRP68 chr17 74035285 PARP1 chr1 226578231 Exonic hg19 NA AA911044 Out-of-frame Inter-chr q25.1 q42.12 Oncogene Tumor suppressor gene 121934 ChimerSeq ChiTaRs ChiTaRs SOX5-SOX5 SOX5 chr12 24040872 SOX5 chr12 24014149 Exonic hg19 NA AA927314 Out-of-frame Intra-chr p12.1 Transcription factor p12.1 Transcription factor 121935 ChimerSeq ChiTaRs ChiTaRs TTC28-AS1-TTC28-AS1 TTC28-AS1 chr22 28358263 TTC28-AS1 chr22 28358085 Exonic hg19 NA AA947254 Out-of-frame Intra-chr q12.1 q12.1 Tumor suppressor gene 121936 ChimerSeq ChiTaRs ChiTaRs DPP9-LDB3 DPP9 chr19 4675842 LDB3 chr10 88488152 Exonic hg19 NA AA972615 Out-of-frame Inter-chr p13.3 q23.2 121937 ChimerSeq ChiTaRs ChiTaRs ZC3H18-NFASC ZC3H18 chr16 88698370 NFASC chr1 204853537 Exonic hg19 NA AA976045 Out-of-frame Inter-chr q24.2 q32.1 121938 ChimerSeq ChiTaRs ChiTaRs SRP14-ABCB11 SRP14 chr15 40331369 ABCB11 chr2 169869119 Exonic hg19 NA AA984265 Out-of-frame Inter-chr q15.1 121939 ChimerSeq ChiTaRs ChiTaRs BCL11B-AMOT BCL11B chr14 99737565 AMOT chrX 112041593 Exonic hg19 NA AB043584 Out-of-frame Inter-chr q32.2 Oncogene Transcription factor q23 121940 ChimerSeq ChiTaRs ChiTaRs UBAC2-IDH3B UBAC2 chr13 100038628 IDH3B chr20 2639041 Exonic hg19 NA AF023265 Out-of-frame Inter-chr q32.3 p13 121941 ChimerSeq ChiTaRs ChiTaRs PNMA1-PNMA1 PNMA1 chr14 74181087 PNMA1 chr14 74178489 Exonic hg19 NA AF037364 Out-of-frame Intra-chr q24.3 q24.3 121942 ChimerSeq ChiTaRs ChiTaRs POLR3E-ERGIC3 POLR3E chr16 22332185 ERGIC3 chr20 34129877 Exonic hg19 NA AF116614 Out-of-frame Inter-chr q11.22 121943 ChimerSeq ChiTaRs ChiTaRs MALAT1-APOB MALAT1 chr11 65270612 APOB chr2 21228718 Exonic hg19 NA AF119905 Out-of-frame Inter-chr q13.1 p24.1 121944 ChimerSeq ChiTaRs ChiTaRs RAB22A-RAB22A RAB22A chr20 56935124 RAB22A chr20 56934752 Exonic hg19 NA AF125104 Out-of-frame Intra-chr q13.32 q13.32 121945 ChimerSeq ChiTaRs ChiTaRs C19orf43-LRRFIP1 C19orf43 chr19 12841534 LRRFIP1 chr2 238672595 Exonic hg19 NA AF130054 Out-of-frame Inter-chr p13.13 q37.3 121946 ChimerSeq ChiTaRs ChiTaRs TMEM38A-SNAPC1 TMEM38A chr19 16789255 SNAPC1 chr14 62255218 Exonic hg19 NA CD657759 Out-of-frame Inter-chr p13.11 q23.2 121947 ChimerSeq ChiTaRs ChiTaRs GPI-FBN1 GPI chr19 34891143 FBN1 chr15 48712787 Exonic hg19 NA AF187554 Out-of-frame Inter-chr q21.1 121948 ChimerSeq ChiTaRs ChiTaRs L2HGDH-PDGFD L2HGDH chr14 50710269 PDGFD chr11 103779888 Exonic hg19 NA AF335584 Out-of-frame Inter-chr q21.3 q22.3 121949 ChimerSeq ChiTaRs ChiTaRs PSG9-NUDCD3 PSG9 chr19 43772073 NUDCD3 chr7 44507465 Exonic hg19 NA AF370435 Out-of-frame Inter-chr q13.31 p13 121950 ChimerSeq ChiTaRs ChiTaRs RAB11B-LOC388796 RAB11B chr19 8469323 LOC388796 chr20 37049380 Exonic hg19 NA AI000285 Out-of-frame Inter-chr p13.2 121951 ChimerSeq ChiTaRs ChiTaRs PAX1-CDC37 PAX1 chr20 21696038 CDC37 chr19 10506604 Exonic hg19 NA AI004584 Out-of-frame Inter-chr p11.22 Transcription factor p13.2 121952 ChimerSeq ChiTaRs ChiTaRs COL2A1-COL2A1 COL2A1 chr12 48366854 COL2A1 chr12 48366893 Exonic hg19 NA AI015105 Out-of-frame Intra-chr q13.11 q13.11 121953 ChimerSeq ChiTaRs ChiTaRs GPR108-RAB5B GPR108 chr19 6730116 RAB5B chr12 56387126 Exonic hg19 NA AI015985 Out-of-frame Inter-chr p13.3 q13.2 121954 ChimerSeq ChiTaRs ChiTaRs WNT5B-HIPK3 WNT5B chr12 1745936 HIPK3 chr11 33373172 Exonic hg19 NA AI025085 Out-of-frame Inter-chr p13.33 p13 CMGC:DYRK 121955 ChimerSeq ChiTaRs ChiTaRs IL10RA-WSB1 IL10RA chr11 117858131 WSB1 chr17 25621961 Exonic hg19 NA AI040205 Out-of-frame Inter-chr q23.3 q11.1 121956 ChimerSeq ChiTaRs ChiTaRs PRSS23-SPRY4 PRSS23 chr11 86520218 SPRY4 chr5 141691529 Exonic hg19 NA AI086914 Out-of-frame Inter-chr q14.2 q31.3 Tumor suppressor gene 121957 ChimerSeq ChiTaRs ChiTaRs KIAA1033-VPS41 KIAA1033 chr12 105561001 VPS41 chr7 38829401 Exonic hg19 NA AI093764 Out-of-frame Inter-chr p14.1 121958 ChimerSeq ChiTaRs ChiTaRs RPS16-FGA RPS16 chr19 39926560 FGA chr4 155506702 Exonic hg19 NA AI114445 Out-of-frame Inter-chr q13.2 q31.3 121959 ChimerSeq ChiTaRs ChiTaRs PICALM-TF PICALM chr11 85700516 TF chr3 133472515 Exonic hg19 NA AI114794 Out-of-frame Inter-chr q14.2 q22.1 121960 ChimerSeq ChiTaRs ChiTaRs RBFOX1-SMYD3 RBFOX1 chr16 7761239 SMYD3 chr1 246115741 Exonic hg19 NA AI141205 Out-of-frame Inter-chr p13.3 q44 Transcription factor 121961 ChimerSeq ChiTaRs ChiTaRs CST3-CST3 CST3 chr20 23614567 CST3 chr20 23614583 Exonic hg19 NA AI142545 Out-of-frame Intra-chr p11.21 p11.21 121962 ChimerSeq ChiTaRs ChiTaRs TMED10-THSD4 TMED10 chr14 75601015 THSD4 chr15 71583554 Exonic hg19 NA AI161054 Out-of-frame Inter-chr q24.3 q23 121963 ChimerSeq ChiTaRs ChiTaRs SNRPN-ARPC2 SNRPN chr15 25584243 ARPC2 chr2 219114162 Exonic hg19 NA AI174735 Out-of-frame Inter-chr q11.2 q35 121964 ChimerSeq ChiTaRs ChiTaRs PPM1E-PPM1E PPM1E chr17 56848700 PPM1E chr17 56901733 Exonic hg19 NA AI183564 Out-of-frame Intra-chr q22 q22 121965 ChimerSeq ChiTaRs ChiTaRs MIR548AE2-GNA13 MIR548AE2 chr16 48385913 GNA13 chr17 63007825 Exonic hg19 NA AI189075 Out-of-frame Inter-chr q11.2 q24.1 121966 ChimerSeq ChiTaRs ChiTaRs PPM1F-POLR3A PPM1F chr22 22297795 POLR3A chr10 79750804 Exonic hg19 NA AI193375 Out-of-frame Inter-chr q11.22 q22.3 121967 ChimerSeq ChiTaRs ChiTaRs ASGR2-BLOC1S1 ASGR2 chr17 7011857 BLOC1S1 chr12 56109902 Exonic hg19 NA AI207464 Out-of-frame Inter-chr p13.1 q13.2 121968 ChimerSeq ChiTaRs ChiTaRs SNRPN-SUGP1 SNRPN chr15 25229692 SUGP1 chr19 19387335 Exonic hg19 NA AI207554 Out-of-frame Inter-chr q11.2 p13.11 121969 ChimerSeq ChiTaRs ChiTaRs USP16-USP16 USP16 chr21 30409654 USP16 chr21 30411812 Exonic hg19 NA AI221835 Out-of-frame Intra-chr q21.3 q21.3 121970 ChimerSeq ChiTaRs ChiTaRs MPPE1-FMO5 MPPE1 chr18 11884109 FMO5 chr1 146676325 Exonic hg19 NA AI240595 Out-of-frame Inter-chr p11.21 q21.1 121971 ChimerSeq ChiTaRs ChiTaRs PPDPF-CHST11 PPDPF chr20 62153519 CHST11 chr12 104851276 Exonic hg19 NA AI243715 Out-of-frame Inter-chr q13.33 q23.3 121972 ChimerSeq ChiTaRs ChiTaRs OAF-AUTS2 OAF chr11 120100650 AUTS2 chr7 70002569 Exonic hg19 NA AI248504 3'UTR-3'UTR Inter-chr q23.3 q11.22 121973 ChimerSeq ChiTaRs ChiTaRs ATPAF2-ZSWIM5 ATPAF2 chr17 17931901 ZSWIM5 chr1 45518127 Exonic hg19 NA AI249524 Out-of-frame Inter-chr p11.2 p34.1 121974 ChimerSeq ChiTaRs ChiTaRs NDRG4-NDRG4 NDRG4 chr16 58547101 NDRG4 chr16 58547109 Exonic hg19 NA AI267605 Out-of-frame Intra-chr q21 Tumor suppressor gene q21 Tumor suppressor gene 121975 ChimerSeq ChiTaRs ChiTaRs WARS-WARS WARS chr14 100801126 WARS chr14 100800717 Exonic hg19 NA AI268655 Out-of-frame Intra-chr q32.2 q32.2 121976 ChimerSeq ChiTaRs ChiTaRs RPS21-PIAS3 RPS21 chr20 60963576 PIAS3 chr1 145578462 Exonic hg19 NA AI275065 3'UTR-CDS Inter-chr q13.33 q21.1 121977 ChimerSeq ChiTaRs ChiTaRs FERMT2-SLC1A2 FERMT2 chr14 53325166 SLC1A2 chr11 35413659 Exonic hg19 NA AI280085 Out-of-frame Inter-chr q22.1 p13 121978 ChimerSeq ChiTaRs ChiTaRs VAMP2-C16orf80 VAMP2 chr17 8062707 C16orf80 chr16 58148757 Exonic hg19 NA AI302145 Out-of-frame Inter-chr p13.1 121979 ChimerSeq ChiTaRs ChiTaRs AXL-FAM168B AXL chr19 41767672 FAM168B chr2 131810485 Exonic hg19 NA AI302445 Out-of-frame Inter-chr q13.2 TK:Axl Oncogene q21.1 121980 ChimerSeq ChiTaRs ChiTaRs ERO1L-ERO1L ERO1L chr14 53152312 ERO1L chr14 53151611 Exonic hg19 NA AI305114 Out-of-frame Intra-chr 121981 ChimerSeq ChiTaRs ChiTaRs PTMS-DDX17 PTMS chr12 6880115 DDX17 chr22 38887895 Exonic hg19 NA AI332565 Out-of-frame Inter-chr p13.31 q13.1 121982 ChimerSeq ChiTaRs ChiTaRs RGMA-SFTPC RGMA chr15 93587025 SFTPC chr8 22020597 Exonic hg19 NA AI336345 Out-of-frame Inter-chr q26.1 p21.3 121983 ChimerSeq ChiTaRs ChiTaRs TBCD-TBCD TBCD chr17 80731506 TBCD chr17 80732928 Exonic hg19 NA AI336944 Out-of-frame Intra-chr 121984 ChimerSeq ChiTaRs ChiTaRs PCIF1-NMRK1 PCIF1 chr20 44576658 NMRK1 chr9 77697150 Exonic hg19 NA AI339194 Out-of-frame Inter-chr q13.12 q21.13 121985 ChimerSeq ChiTaRs ChiTaRs PTRF-CDC42EP5 PTRF chr17 40575261 CDC42EP5 chr19 54976334 Exonic hg19 NA AI347175 Out-of-frame Inter-chr 121986 ChimerSeq ChiTaRs ChiTaRs AES-ABL1 AES chr19 3053266 ABL1 chr9 133730256 Exonic hg19 NA AI369824 Out-of-frame Inter-chr p13.3 q34.12 TK:Abl Oncogene 121987 ChimerSeq ChiTaRs ChiTaRs TIMP2-TIMP2 TIMP2 chr17 76849855 TIMP2 chr17 76851609 Exonic hg19 NA AI370444 Out-of-frame Intra-chr q25.3 q25.3 121988 ChimerSeq ChiTaRs ChiTaRs FKBP10-MEGF11 FKBP10 chr17 39979465 MEGF11 chr15 66190150 Exonic hg19 NA AI376184 Out-of-frame Inter-chr q21.2 q22.31 121989 ChimerSeq ChiTaRs ChiTaRs ZC3H18-ZC3H18 ZC3H18 chr16 88697984 ZC3H18 chr16 88694166 Exonic hg19 NA AI394555 Out-of-frame Intra-chr q24.2 q24.2 121990 ChimerSeq ChiTaRs ChiTaRs BOLA2-ACTN4 BOLA2 chr16 30004072 ACTN4 chr19 39210633 Exonic hg19 NA AI424925 Out-of-frame Inter-chr p11.2 121991 ChimerSeq ChiTaRs ChiTaRs SLC1A5-CNTN4 SLC1A5 chr19 47278361 CNTN4 chr3 2355931 Exonic hg19 NA AI439494 Out-of-frame Inter-chr q13.32 p26.3 121992 ChimerSeq ChiTaRs ChiTaRs KDELR3-KDELR3 KDELR3 chr22 38879450 KDELR3 chr22 38879083 Exonic hg19 NA AI470645 Out-of-frame Intra-chr q13.1 q13.1 121993 ChimerSeq ChiTaRs ChiTaRs PLK1-HDLBP PLK1 chr16 23701832 HDLBP chr2 242191427 Exonic hg19 NA AI476705 Out-of-frame Inter-chr p12.2 Other:PLK Tumor suppressor gene q37.3 121994 ChimerSeq ChiTaRs ChiTaRs CDC6-CDC6 CDC6 chr17 38458235 CDC6 chr17 38450630 Exonic hg19 NA AI478744 Out-of-frame Intra-chr q21.2 q21.2 121995 ChimerSeq ChiTaRs ChiTaRs PLXNB2-TRIM25 PLXNB2 chr22 50713479 TRIM25 chr17 54990919 Exonic hg19 NA AI492115 Out-of-frame Inter-chr q13.33 q22 121996 ChimerSeq ChiTaRs ChiTaRs GIT1-CYB5D2 GIT1 chr17 27900900 CYB5D2 chr17 4058388 Exonic hg19 NA AI498045 Out-of-frame Intra-chr q11.2 p13.2 121997 ChimerSeq ChiTaRs ChiTaRs RPS11-LIPC RPS11 chr19 50002946 LIPC chr15 58805185 Exonic hg19 NA AI589684 Out-of-frame Inter-chr q13.33 q21.3 121998 ChimerSeq ChiTaRs ChiTaRs ERBB3-PDLIM5 ERBB3 chr12 56497283 PDLIM5 chr4 95495720 Exonic hg19 NA AI610375 Out-of-frame Inter-chr q13.2 Oncogene q22.3 121999 ChimerSeq ChiTaRs ChiTaRs LOXL1-LOXL1 LOXL1 chr15 74244468 LOXL1 chr15 74244172 Exonic hg19 NA AI631494 Out-of-frame Intra-chr q24.1 q24.1 122000 ChimerSeq ChiTaRs ChiTaRs TRAF4-TRAF4 TRAF4 chr17 27077094 TRAF4 chr17 27075966 Exonic hg19 NA AI632035 Out-of-frame Intra-chr q11.2 q11.2 122001 ChimerSeq ChiTaRs ChiTaRs MEG3-MEG3 MEG3 chr14 101312985 MEG3 chr14 101317572 Exonic hg19 NA AI651945 Out-of-frame Intra-chr q32.2 Tumor suppressor gene q32.2 Tumor suppressor gene 122002 ChimerSeq ChiTaRs ChiTaRs DYNC1H1-DYNC1H1 DYNC1H1 chr14 102517126 DYNC1H1 chr14 102516832 Exonic hg19 NA AI652615 Out-of-frame Intra-chr q32.31 q32.31 122003 ChimerSeq ChiTaRs ChiTaRs IFT140-IFT140 IFT140 chr16 1585057 IFT140 chr16 1591282 Exonic hg19 NA AI654565 Out-of-frame Intra-chr p13.3 p13.3 122004 ChimerSeq ChiTaRs ChiTaRs SC5DL-BCL11A SC5DL chr11 121170174 BCL11A chr2 60733201 Exonic hg19 NA AI655175 Out-of-frame Inter-chr p16.1 Oncogene Transcription factor 122005 ChimerSeq ChiTaRs ChiTaRs LOXL1-LOXL1 LOXL1 chr15 74244476 LOXL1 chr15 74244172 Exonic hg19 NA AI655545 Out-of-frame Intra-chr q24.1 q24.1 122006 ChimerSeq ChiTaRs ChiTaRs APOL1-IFFO2 APOL1 chr22 36663569 IFFO2 chr1 19234858 Exonic hg19 NA AI686194 Out-of-frame Inter-chr q12.3 p36.13 122007 ChimerSeq ChiTaRs ChiTaRs NDEL1-NDEL1 NDEL1 chr17 8370877 NDEL1 chr17 8370861 Exonic hg19 NA AI693825 Out-of-frame Intra-chr p13.1 p13.1 122008 ChimerSeq ChiTaRs ChiTaRs NDE1-NDE1 NDE1 chr16 15818594 NDE1 chr16 15814858 Exonic hg19 NA AI695545 Out-of-frame Intra-chr p13.11 p13.11 122009 ChimerSeq ChiTaRs ChiTaRs METTL17-POLR1A METTL17 chr14 21465194 POLR1A chr2 86253966 Exonic hg19 NA AI742345 3'UTR-3'UTR Inter-chr q11.2 p11.2 122010 ChimerSeq ChiTaRs ChiTaRs ARF3-ARF3 ARF3 chr12 49331389 ARF3 chr12 49331518 Exonic hg19 NA AI742354 Out-of-frame Intra-chr q13.12 q13.12 122011 ChimerSeq ChiTaRs ChiTaRs GRAMD1A-CARS GRAMD1A chr19 35491390 CARS chr11 3038387 Exonic hg19 NA AI300436 In-Frame Inter-chr q13.11 122012 ChimerSeq ChiTaRs ChiTaRs SYN3-SYN3 SYN3 chr22 33453844 SYN3 chr22 33453815 Exonic hg19 NA DQ655947 Out-of-frame Intra-chr q12.3 q12.3 122013 ChimerSeq ChiTaRs ChiTaRs TXNL4B-MRPS10 TXNL4B chr16 72094045 MRPS10 chr6 42176038 Exonic hg19 NA FJ423748 Out-of-frame Inter-chr q22.2 p21.1 122014 ChimerSeq ChiTaRs ChiTaRs CSNK1G1-FADS3 CSNK1G1 chr15 64511076 FADS3 chr11 61640998 Exonic hg19 NA AA642379 Out-of-frame Inter-chr q22.31 q12.2 122015 ChimerSeq ChiTaRs ChiTaRs LPCAT3-GSG1L LPCAT3 chr12 7126194 GSG1L chr16 28074746 Exonic hg19 NA AI870471 Out-of-frame Inter-chr p13.31 p12.1 122016 ChimerSeq ChiTaRs ChiTaRs UBA52-SMARCC1 UBA52 chr19 18686051 SMARCC1 chr3 47737252 Exonic hg19 NA CD579874 Out-of-frame Inter-chr p13.11 p21.31 Tumor suppressor gene 122017 ChimerSeq ChiTaRs ChiTaRs OPCML-SMARCD2 OPCML chr11 132777864 SMARCD2 chr17 61909445 Exonic hg19 NA AI471650 Out-of-frame Inter-chr q25 Tumor suppressor gene q23.3 122018 ChimerSeq ChiTaRs ChiTaRs UBA52-DZIP1L UBA52 chr19 18686037 DZIP1L chr3 137795036 Exonic hg19 NA AA329258 Out-of-frame Inter-chr p13.11 q22.3 122019 ChimerSeq ChiTaRs ChiTaRs SHD-DAZ4 SHD chr19 4280407 DAZ4 chrY 26997726 Exonic hg19 NA AA757954 Out-of-frame Inter-chr p13.3 q11.23 122020 ChimerSeq ChiTaRs ChiTaRs SMARCD2-ACSS3 SMARCD2 chr17 61909772 ACSS3 chr12 81612754 Exonic hg19 NA AI871518 Out-of-frame Inter-chr q23.3 q21.31 122021 ChimerSeq ChiTaRs ChiTaRs UBA52-CSH1 UBA52 chr19 18684186 CSH1 chr17 61972973 Exonic hg19 NA AA368309 Out-of-frame Inter-chr p13.11 q23.3 122022 ChimerSeq ChiTaRs ChiTaRs PSME3-TRIM44 PSME3 chr17 40992986 TRIM44 chr11 35815651 Exonic hg19 NA AW007317 Out-of-frame Inter-chr q21.31 p13 122023 ChimerSeq ChiTaRs ChiTaRs FOS-FOS FOS chr14 75747659 FOS chr14 75745716 Exonic hg19 NA BF089597 Out-of-frame Intra-chr q24.3 Transcription factor q24.3 Transcription factor 122024 ChimerSeq ChiTaRs ChiTaRs ATP2A2-EIF6 ATP2A2 chr12 110784847 EIF6 chr20 33871978 Exonic hg19 NA BQ679197 3'UTR-CDS Inter-chr q24.11 q11.22 122025 ChimerSeq ChiTaRs ChiTaRs MTHFD1-MTHFD1 MTHFD1 chr14 64915518 MTHFD1 chr14 64915015 Exonic hg19 NA W27097 Out-of-frame Intra-chr q23.3 q23.3 122026 ChimerSeq ChiTaRs ChiTaRs ALKBH5-UBR5 ALKBH5 chr17 18101810 UBR5 chr8 103265567 Exonic hg19 NA BQ186237 Out-of-frame Inter-chr p11.2 q22.3 Oncogene 122027 ChimerSeq ChiTaRs ChiTaRs ZNF83-SAFB ZNF83 chr19 53116212 SAFB chr19 5623371 Exonic hg19 NA BF081607 Out-of-frame Intra-chr q13.41 Transcription factor p13.3 Tumor suppressor gene Transcription factor 122028 ChimerSeq ChiTaRs ChiTaRs C12orf75-C12orf75 C12orf75 chr12 105740289 C12orf75 chr12 105737630 Exonic hg19 NA BG754287 Out-of-frame Intra-chr q23.3 q23.3 122029 ChimerSeq ChiTaRs ChiTaRs ARHGDIB-ENO1 ARHGDIB chr12 15114517 ENO1 chr1 8931542 Exonic hg19 NA BG389117 Out-of-frame Inter-chr p12.3 p36.23 122030 ChimerSeq ChiTaRs ChiTaRs STAT6-STAT6 STAT6 chr12 57493687 STAT6 chr12 57493838 Exonic hg19 NA BI024527 Out-of-frame Intra-chr q13.3 Transcription factor q13.3 Transcription factor 122031 ChimerSeq ChiTaRs ChiTaRs MED21-FBXO11 MED21 chr12 27182682 FBXO11 chr2 48034451 Exonic hg19 NA AI435007 3'UTR-3'UTR Inter-chr p11.23 p16.3 122032 ChimerSeq ChiTaRs ChiTaRs USP44-LEPRE1 USP44 chr12 95942591 LEPRE1 chr1 43228011 Exonic hg19 NA DB481807 Out-of-frame Inter-chr q22 122033 ChimerSeq ChiTaRs ChiTaRs APOLD1-EEF1A1 APOLD1 chr12 12941344 EEF1A1 chr6 74227241 Exonic hg19 NA AK057867 Out-of-frame Inter-chr p13.1 q13 Tumor suppressor gene 122034 ChimerSeq ChiTaRs ChiTaRs GUSBP11-GUSBP11 GUSBP11 chr22 24040205 GUSBP11 chr22 24038688 Exonic hg19 NA BC047947 Out-of-frame Intra-chr q11.23 q11.23 122035 ChimerSeq ChiTaRs ChiTaRs RFFL-FLNA RFFL chr17 33337204 FLNA chrX 153577863 Exonic hg19 NA T12127 Out-of-frame Inter-chr q12 q28 Tumor suppressor gene 122036 ChimerSeq ChiTaRs ChiTaRs MLL-LOC643339 MLL chr11 118355549 LOC643339 chr12 93404759 Exonic hg19 NA S63395 Out-of-frame Inter-chr q23.3 122037 ChimerSeq ChiTaRs ChiTaRs MAML2-EPHB2 MAML2 chr11 95756438 EPHB2 chr1 23235514 Exonic hg19 NA BF929677 Out-of-frame Inter-chr q21 Oncogene p36.12 Tumor suppressor gene 122038 ChimerSeq ChiTaRs ChiTaRs FAU-CALR FAU chr11 64888260 CALR chr19 13050328 Exonic hg19 NA BG491927 Out-of-frame Inter-chr q13.1 p13.13 122039 ChimerSeq ChiTaRs ChiTaRs LOC100287944-MUC3A LOC100287944 chr12 106919456 MUC3A chr7 100610712 Exonic hg19 NA BG951977 Out-of-frame Inter-chr q22.1 122040 ChimerSeq ChiTaRs ChiTaRs NDRG2-ERC1 NDRG2 chr14 21485127 ERC1 chr12 1526383 Exonic hg19 NA AW590587 Out-of-frame Inter-chr q11.2 Tumor suppressor gene 122041 ChimerSeq ChiTaRs ChiTaRs CYTH2-TAF1D CYTH2 chr19 48981357 TAF1D chr11 93463586 Exonic hg19 NA DA568557 Out-of-frame Inter-chr q13.33 q21 122042 ChimerSeq ChiTaRs ChiTaRs DDX54-DDX54 DDX54 chr12 113623179 DDX54 chr12 113612845 Exonic hg19 NA CO393727 Out-of-frame Intra-chr q24.13 q24.13 122043 ChimerSeq ChiTaRs ChiTaRs DNAJC15-DES DNAJC15 chr13 43648799 DES chr2 220284858 Exonic hg19 NA AK022087 Out-of-frame Inter-chr q14.11 q35 122044 ChimerSeq ChiTaRs ChiTaRs ULK2-HSPH1 ULK2 chr17 19744595 HSPH1 chr13 31735681 Exonic hg19 NA DB170097 Out-of-frame Inter-chr p11.2 Other:ULK q12.3 122045 ChimerSeq ChiTaRs ChiTaRs EPG5-ETV5 EPG5 chr18 43469907 ETV5 chr3 185823457 Exonic hg19 NA BI046967 Out-of-frame Inter-chr q21.1 q27.2 Oncogene Transcription factor 122046 ChimerSeq ChiTaRs ChiTaRs DENND5B-BCL7B DENND5B chr12 31603069 BCL7B chr7 72950686 Exonic hg19 NA AK123497 Out-of-frame Inter-chr p11.21 q11.23 122047 ChimerSeq ChiTaRs ChiTaRs BBC3-BBC3 BBC3 chr19 47735414 BBC3 chr19 47732677 Exonic hg19 NA BI062677 Out-of-frame Intra-chr q13.32 Tumor suppressor gene q13.32 Tumor suppressor gene 122048 ChimerSeq ChiTaRs ChiTaRs CALM3-DDX5 CALM3 chr19 47112954 DDX5 chr17 62496951 Exonic hg19 NA BF802907 Out-of-frame Inter-chr q13.32 q23.3 122049 ChimerSeq ChiTaRs ChiTaRs FBRSL1-RBM42 FBRSL1 chr12 133088541 RBM42 chr19 36121757 Exonic hg19 NA AW665507 Out-of-frame Inter-chr q24.33 q13.12 122050 ChimerSeq ChiTaRs ChiTaRs WFDC2-WFDC2 WFDC2 chr20 44099083 WFDC2 chr20 44099117 Exonic hg19 NA BE816517 Out-of-frame Intra-chr q13.12 q13.12 122051 ChimerSeq ChiTaRs ChiTaRs RILPL1-RILPL1 RILPL1 chr12 124016992 RILPL1 chr12 124016999 Exonic hg19 NA BF828057 Out-of-frame Intra-chr q24.31 q24.31 122052 ChimerSeq ChiTaRs ChiTaRs ATP2B1-ATP2B1 ATP2B1 chr12 89997754 ATP2B1 chr12 89997397 Exonic hg19 NA AA828877 Out-of-frame Intra-chr q21.33 q21.33 122053 ChimerSeq ChiTaRs ChiTaRs ASXL1-FTX ASXL1 chr20 31021120 FTX chrX 73437414 Exonic hg19 NA BF355507 Out-of-frame Inter-chr q11.21 Oncogene Tumor suppressor gene q13.2 122054 ChimerSeq ChiTaRs ChiTaRs DDX5-RPL13 DDX5 chr17 62502397 RPL13 chr16 89630778 Exonic hg19 NA DA534037 Out-of-frame Inter-chr q23.3 q24.3 122055 ChimerSeq ChiTaRs ChiTaRs NFATC3-NFATC3 NFATC3 chr16 68260842 NFATC3 chr16 68261477 Exonic hg19 NA BE858997 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Transcription factor 122056 ChimerSeq ChiTaRs ChiTaRs MYH7-CLCN1 MYH7 chr14 23883034 CLCN1 chr7 143022572 Exonic hg19 NA AA211487 Out-of-frame Inter-chr q11.2 q34 122057 ChimerSeq ChiTaRs ChiTaRs HECTD1-EIF4G2 HECTD1 chr14 31569989 EIF4G2 chr11 10820550 Exonic hg19 NA BE088937 Out-of-frame Inter-chr q12 p15.4 122058 ChimerSeq ChiTaRs ChiTaRs EPB41L3-FYB EPB41L3 chr18 5393472 FYB chr5 39127859 Exonic hg19 NA BF931907 Out-of-frame Inter-chr p11.31 Tumor suppressor gene p13.1 122059 ChimerSeq ChiTaRs ChiTaRs CACNA1G-TATDN2 CACNA1G chr17 48703792 TATDN2 chr3 10301979 Exonic hg19 NA AW901367 Out-of-frame Inter-chr q21.33 p25.3 122060 ChimerSeq ChiTaRs ChiTaRs PIP4K2B-PIP4K2B PIP4K2B chr17 36943175 PIP4K2B chr17 36933940 Exonic hg19 NA BF849647 Out-of-frame Intra-chr q12 q12 122061 ChimerSeq ChiTaRs ChiTaRs TTC28-IGSF3 TTC28 chr22 28980928 IGSF3 chr1 117186261 Exonic hg19 NA CV373587 Out-of-frame Inter-chr q12.1 p13.1 122062 ChimerSeq ChiTaRs ChiTaRs PRSS23-PRSS23 PRSS23 chr11 86515491 PRSS23 chr11 86515542 Exonic hg19 NA CV359287 Out-of-frame Intra-chr q14.2 q14.2 122063 ChimerSeq ChiTaRs ChiTaRs DNAJC7-BBS5 DNAJC7 chr17 40142322 BBS5 chr2 170360304 Exonic hg19 NA AW814887 Out-of-frame Inter-chr q21.2 q31.1 122064 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65268300 MALAT1 chr11 65266762 Exonic hg19 NA DW433727 Out-of-frame Intra-chr q13.1 q13.1 122065 ChimerSeq ChiTaRs ChiTaRs ATP5B-PTMA ATP5B chr12 57038740 PTMA chr2 232573311 Exonic hg19 NA CV344647 Out-of-frame Inter-chr q13.3 q37.1 122066 ChimerSeq ChiTaRs ChiTaRs SLC5A2-IGSF8 SLC5A2 chr16 31501280 IGSF8 chr1 160061638 Exonic hg19 NA BF944197 Out-of-frame Inter-chr p11.2 q23.2 122067 ChimerSeq ChiTaRs ChiTaRs TXNL4B-NR4A1 TXNL4B chr16 72120192 NR4A1 chr12 52446078 Exonic hg19 NA CD517507 Out-of-frame Inter-chr q22.2 q13.13 Tumor suppressor gene Transcription factor 122068 ChimerSeq ChiTaRs ChiTaRs CABIN1-LAMB1 CABIN1 chr22 24499541 LAMB1 chr7 107582852 Exonic hg19 NA BF934327 Out-of-frame Inter-chr q31.1 122069 ChimerSeq ChiTaRs ChiTaRs C20orf96-RAB12 C20orf96 chr20 257387 RAB12 chr18 8639119 Exonic hg19 NA T06477 Out-of-frame Inter-chr p13 p11.22 122070 ChimerSeq ChiTaRs ChiTaRs ADAM10-ANKRD11 ADAM10 chr15 59001699 ANKRD11 chr16 89478078 Exonic hg19 NA CV342067 Out-of-frame Inter-chr q21.3 q24.3 122071 ChimerSeq ChiTaRs ChiTaRs MCM8-MCM8 MCM8 chr20 5975383 MCM8 chr20 5975047 Exonic hg19 NA AA225697 Out-of-frame Intra-chr p12.3 p12.3 122072 ChimerSeq ChiTaRs ChiTaRs SF3B2-SCAF4 SF3B2 chr11 65828091 SCAF4 chr21 33043300 Exonic hg19 NA BF820647 Out-of-frame Inter-chr q13.1 q22.11 122073 ChimerSeq ChiTaRs ChiTaRs CDAN1-F13A1 CDAN1 chr15 43022963 F13A1 chr6 6308695 Exonic hg19 NA AY358467 Out-of-frame Inter-chr q15.2 p25.1 122074 ChimerSeq ChiTaRs ChiTaRs SMARCD2-AMOTL1 SMARCD2 chr17 61913009 AMOTL1 chr11 94592831 Exonic hg19 NA BI028147 Out-of-frame Inter-chr q23.3 q21 122075 ChimerSeq ChiTaRs ChiTaRs LLGL2-PXN LLGL2 chr17 73564895 PXN chr12 120651158 Exonic hg19 NA BF872537 Out-of-frame Inter-chr q25.1 q24.23 122076 ChimerSeq ChiTaRs ChiTaRs TOB2-SLC35D1 TOB2 chr22 41837670 SLC35D1 chr1 67465608 Exonic hg19 NA AA938727 Out-of-frame Inter-chr q13.2 p31.3 122077 ChimerSeq ChiTaRs ChiTaRs FUS-RUNX1 FUS chr16 31200435 RUNX1 chr21 36226942 Exonic hg19 NA BF889377 Out-of-frame Inter-chr p11.2 Tumor suppressor gene q22.12 Oncogene Tumor suppressor gene Transcription factor 122078 ChimerSeq ChiTaRs ChiTaRs ACAA2-LOC100505989 ACAA2 chr18 47339910 LOC100505989 chr4 165698716 Exonic hg19 NA AV688387 Out-of-frame Inter-chr q21.1 122079 ChimerSeq ChiTaRs ChiTaRs ANKS1B-MED12 ANKS1B chr12 99784255 MED12 chrX 70343019 Exonic hg19 NA BF361917 Out-of-frame Inter-chr q23.1 q13.1 Oncogene 122080 ChimerSeq ChiTaRs ChiTaRs CDCA4-CDCA4 CDCA4 chr14 105478045 CDCA4 chr14 105477272 Exonic hg19 NA CR985247 Out-of-frame Intra-chr q32.33 q32.33 122081 ChimerSeq ChiTaRs ChiTaRs LRRK1-GSTA4 LRRK1 chr15 101555538 GSTA4 chr6 52849831 Exonic hg19 NA BX477527 Out-of-frame Inter-chr q26.3 TKL:LRRK p12.2 122082 ChimerSeq ChiTaRs ChiTaRs IFI27-IFI27 IFI27 chr14 94582861 IFI27 chr14 94581206 Exonic hg19 NA BG230457 Out-of-frame Intra-chr q32.12 q32.12 122083 ChimerSeq ChiTaRs ChiTaRs PSMD11-PSMD11 PSMD11 chr17 30806348 PSMD11 chr17 30796104 Exonic hg19 NA BF083127 Out-of-frame Intra-chr q11.2 q11.2 122084 ChimerSeq ChiTaRs ChiTaRs ZC3H18-GNB2L1 ZC3H18 chr16 88644756 GNB2L1 chr5 180666506 Exonic hg19 NA BF761227 Out-of-frame Inter-chr q24.2 Tumor suppressor gene 122085 ChimerSeq ChiTaRs ChiTaRs MT1G-DAO MT1G chr16 56701975 DAO chr12 109273885 Exonic hg19 NA X13227 Out-of-frame Inter-chr q13 Tumor suppressor gene q24.11 122086 ChimerSeq ChiTaRs ChiTaRs ENTPD5-ENTPD5 ENTPD5 chr14 74431183 ENTPD5 chr14 74430496 Exonic hg19 NA BG402857 Out-of-frame Intra-chr q24.3 q24.3 122087 ChimerSeq ChiTaRs ChiTaRs PNPO-KCNT2 PNPO chr17 46025641 KCNT2 chr1 196441331 Exonic hg19 NA BU741757 Out-of-frame Inter-chr q21.32 q31.3 122088 ChimerSeq ChiTaRs ChiTaRs CTDSPL2-CTDSPL2 CTDSPL2 chr15 44724480 CTDSPL2 chr15 44730065 Exonic hg19 NA AI032597 Out-of-frame Intra-chr q15.3 q15.3 122089 ChimerSeq ChiTaRs ChiTaRs U2AF2-U2AF2 U2AF2 chr19 56173371 U2AF2 chr19 56173351 Exonic hg19 NA CA314707 Out-of-frame Intra-chr q13.42 q13.42 122090 ChimerSeq ChiTaRs ChiTaRs NXN-NXN NXN chr17 704373 NXN chr17 706921 Exonic hg19 NA BE062257 Out-of-frame Intra-chr p13.3 p13.3 122091 ChimerSeq ChiTaRs ChiTaRs GRN-DOCK6 GRN chr17 42427666 DOCK6 chr19 11332586 Exonic hg19 NA BG945987 Out-of-frame Inter-chr q21.31 p13.2 122092 ChimerSeq ChiTaRs ChiTaRs C19orf57-ASXL2 C19orf57 chr19 14012708 ASXL2 chr2 25968084 Exonic hg19 NA AK172757 Out-of-frame Inter-chr p13.12 p23.3 122093 ChimerSeq ChiTaRs ChiTaRs WSCD1-PTDSS1 WSCD1 chr17 6002468 PTDSS1 chr8 97315086 Exonic hg19 NA AL589407 Out-of-frame Inter-chr p13.2 q22.1 122094 ChimerSeq ChiTaRs ChiTaRs NSRP1-ZNF44 NSRP1 chr17 28445681 ZNF44 chr19 12396067 Exonic hg19 NA AW842117 Out-of-frame Inter-chr q11.2 p13.2 Transcription factor 122095 ChimerSeq ChiTaRs ChiTaRs GPHN-CCDC12 GPHN chr14 67102571 CCDC12 chr3 46982228 Exonic hg19 NA BX509307 Out-of-frame Inter-chr q23.3 p21.31 122096 ChimerSeq ChiTaRs ChiTaRs EDEM2-CTSS EDEM2 chr20 33856566 CTSS chr1 150705384 Exonic hg19 NA BQ015907 Out-of-frame Inter-chr q11.22 q21.3 122097 ChimerSeq ChiTaRs ChiTaRs ARL17A-ARL17A ARL17A chr17 486707 ARL17A chr17 486590 Exonic hg19 NA BF934957 Out-of-frame Intra-chr q21.31 q21.31 122098 ChimerSeq ChiTaRs ChiTaRs MPG-ENTPD6 MPG chr16 135401 ENTPD6 chr20 25187288 Exonic hg19 NA EL583107 Out-of-frame Inter-chr p13.3 p11.21 122099 ChimerSeq ChiTaRs ChiTaRs ZDHHC20-HBB ZDHHC20 chr13 21950021 HBB chr11 5248003 Exonic hg19 NA AI133247 Out-of-frame Inter-chr q12.11 p15.4 122100 ChimerSeq ChiTaRs ChiTaRs ATP5A1-BAIAP2L1 ATP5A1 chr18 43678239 BAIAP2L1 chr7 98015039 Exonic hg19 NA BC007607 Out-of-frame Inter-chr q21.1 q22.1 122101 ChimerSeq ChiTaRs ChiTaRs ETNK1-ETNK1 ETNK1 chr12 22838206 ETNK1 chr12 22837424 Exonic hg19 NA CB306777 Out-of-frame Intra-chr p12.1 p12.1 122102 ChimerSeq ChiTaRs ChiTaRs RCN2-RCN2 RCN2 chr15 77241699 RCN2 chr15 77241671 Exonic hg19 NA CN422557 Out-of-frame Intra-chr q24.3 q24.3 122103 ChimerSeq ChiTaRs ChiTaRs COX6B1-B2M COX6B1 chr19 36149684 B2M chr15 45003784 Exonic hg19 NA CA776837 Out-of-frame Inter-chr q13.12 Oncogene 122104 ChimerSeq ChiTaRs ChiTaRs YLPM1-YLPM1 YLPM1 chr14 75302143 YLPM1 chr14 75290811 Exonic hg19 NA AA420467 Out-of-frame Intra-chr q24.3 q24.3 122105 ChimerSeq ChiTaRs ChiTaRs YLPM1-YLPM1 YLPM1 chr14 75264876 YLPM1 chr14 75264906 Exonic hg19 NA AW387287 Out-of-frame Intra-chr q24.3 q24.3 122106 ChimerSeq ChiTaRs ChiTaRs LTBP3-CYHR1 LTBP3 chr11 65308609 CYHR1 chr8 145689408 Exonic hg19 NA BF930907 Out-of-frame Inter-chr q13.1 q24.3 122107 ChimerSeq ChiTaRs ChiTaRs PWP2-IFT140 PWP2 chr21 45550994 IFT140 chr16 1618303 Exonic hg19 NA DB341397 Out-of-frame Inter-chr q22.3 p13.3 122108 ChimerSeq ChiTaRs ChiTaRs LOC284395-MID1 LOC284395 chr19 29984317 MID1 chrX 10534928 Exonic hg19 NA AF041207 Out-of-frame Inter-chr p22.2 122109 ChimerSeq ChiTaRs ChiTaRs TSHZ2-TSHZ2 TSHZ2 chr20 51759362 TSHZ2 chr20 51765644 Exonic hg19 NA BE466097 Out-of-frame Intra-chr q13.2 Transcription factor q13.2 Transcription factor 122110 ChimerSeq ChiTaRs ChiTaRs ABR-ABR ABR chr17 909278 ABR chr17 909299 Exonic hg19 NA BI046397 Out-of-frame Intra-chr p13.3 p13.3 122111 ChimerSeq ChiTaRs ChiTaRs RAB11B-RRBP1 RAB11B chr19 8469213 RRBP1 chr20 17621075 Exonic hg19 NA AI051667 Out-of-frame Inter-chr p13.2 p12.1 122112 ChimerSeq ChiTaRs ChiTaRs PICALM-PICALM PICALM chr11 85668577 PICALM chr11 85668509 Exonic hg19 NA BG389627 Out-of-frame Intra-chr q14.2 q14.2 122113 ChimerSeq ChiTaRs ChiTaRs LSM14A-STAG2 LSM14A chr19 34688903 STAG2 chrX 123153178 Exonic hg19 NA AW364737 Out-of-frame Inter-chr q25 Oncogene 122114 ChimerSeq ChiTaRs ChiTaRs C17orf76-AS1-SCRN1 C17orf76-AS1 chr17 16342704 SCRN1 chr7 29963371 Exonic hg19 NA DA788557 Out-of-frame Inter-chr p14.3 Tumor suppressor gene 122115 ChimerSeq ChiTaRs ChiTaRs FAM104A-FXR2 FAM104A chr17 71228281 FXR2 chr17 7496359 Exonic hg19 NA BQ430227 Out-of-frame Intra-chr q25.1 p13.1 122116 ChimerSeq ChiTaRs ChiTaRs EIF3D-EIF3D EIF3D chr22 36907656 EIF3D chr22 36912525 Exonic hg19 NA AI028447 Out-of-frame Intra-chr q12.3 q12.3 122117 ChimerSeq ChiTaRs ChiTaRs ZNF384-SDR16C5 ZNF384 chr12 6776259 SDR16C5 chr8 57213284 Exonic hg19 NA BE464107 Out-of-frame Inter-chr p13.31 Oncogene Transcription factor q12.1 122118 ChimerSeq ChiTaRs ChiTaRs PIGP-KIAA1199 PIGP chr21 38444910 KIAA1199 chr15 81177832 Exonic hg19 NA AV753487 Out-of-frame Inter-chr q22.13 122119 ChimerSeq ChiTaRs ChiTaRs PRKCH-PRKCH PRKCH chr14 61789382 PRKCH chr14 61909828 Exonic hg19 NA DA435287 Out-of-frame Intra-chr q23.1 q23.1 122120 ChimerSeq ChiTaRs ChiTaRs PPAN-SLC6A2 PPAN chr19 10221970 SLC6A2 chr16 55738618 Exonic hg19 NA BC007937 Out-of-frame Inter-chr p13.2 q12.2 122121 ChimerSeq ChiTaRs ChiTaRs TNRC6B-TP63 TNRC6B chr22 40685643 TP63 chr3 189449012 Exonic hg19 NA AW852777 Out-of-frame Inter-chr q13.1 q28 Tumor suppressor gene Transcription factor 122122 ChimerSeq ChiTaRs ChiTaRs TMEM123-TMEM123 TMEM123 chr11 102267254 TMEM123 chr11 102267162 Exonic hg19 NA T10817 Out-of-frame Intra-chr q22.2 q22.2 122123 ChimerSeq ChiTaRs ChiTaRs SOD1-NAP1L4 SOD1 chr21 33039689 NAP1L4 chr11 2965892 Exonic hg19 NA AW948547 Out-of-frame Inter-chr q22.11 122124 ChimerSeq ChiTaRs ChiTaRs CD248-CD248 CD248 chr11 66082541 CD248 chr11 66082763 Exonic hg19 NA CF131257 Out-of-frame Intra-chr q13.2 q13.2 122125 ChimerSeq ChiTaRs ChiTaRs MEG3-MEG3 MEG3 chr14 101327363 MEG3 chr14 101302125 Exonic hg19 NA BU783107 Out-of-frame Intra-chr q32.2 Tumor suppressor gene q32.2 Tumor suppressor gene 122126 ChimerSeq ChiTaRs ChiTaRs BACE2-DNAJB6 BACE2 chr21 42648524 DNAJB6 chr7 157205468 Exonic hg19 NA AI636667 3'UTR-3'UTR Inter-chr q22.2 q36.3 122127 ChimerSeq ChiTaRs ChiTaRs CCDC90B-CCDC90B CCDC90B chr11 82972579 CCDC90B chr11 82972514 Exonic hg19 NA BG167137 Out-of-frame Intra-chr q14.1 q14.1 122128 ChimerSeq ChiTaRs ChiTaRs NTRK3-SLC8B1 NTRK3 chr15 88769019 SLC8B1 chr12 113736995 Exonic hg19 NA BF879827 Out-of-frame Inter-chr q25.3 Oncogene Tumor suppressor gene q24.13 122129 ChimerSeq ChiTaRs ChiTaRs DPM1-DPM1 DPM1 chr20 49565958 DPM1 chr20 49566852 Exonic hg19 NA AW937417 Out-of-frame Intra-chr q13.13 q13.13 122130 ChimerSeq ChiTaRs ChiTaRs SLC4A1-TCF7L1 SLC4A1 chr17 42325911 TCF7L1 chr2 85362506 Exonic hg19 NA AJ709327 Out-of-frame Inter-chr q21.31 p11.2 Oncogene Transcription factor 122131 ChimerSeq ChiTaRs ChiTaRs HN1-RFX7 HN1 chr17 73131582 RFX7 chr15 56387641 Exonic hg19 NA DB315927 Out-of-frame Inter-chr q21.3 Transcription factor 122132 ChimerSeq ChiTaRs ChiTaRs SSH2-GOLGA7 SSH2 chr17 28050973 GOLGA7 chr8 41368022 Exonic hg19 NA BF988817 Out-of-frame Inter-chr q11.2 p11.21 122133 ChimerSeq ChiTaRs ChiTaRs UNKL-TJP1 UNKL chr16 1421841 TJP1 chr15 29992356 Exonic hg19 NA L14837 3'UTR-3'UTR Inter-chr p13.3 122134 ChimerSeq ChiTaRs ChiTaRs RNF213-RNF213 RNF213 chr17 78355916 RNF213 chr17 78360122 Exonic hg19 NA BE841247 Out-of-frame Intra-chr q25.3 Oncogene q25.3 Oncogene 122135 ChimerSeq ChiTaRs ChiTaRs PPP5C-DCP1B PPP5C chr19 46894108 DCP1B chr12 2062251 Exonic hg19 NA AW262847 Out-of-frame Inter-chr q13.32 p13.33 122136 ChimerSeq ChiTaRs ChiTaRs KRI1-GPKOW KRI1 chr19 10671119 GPKOW chrX 48969262 Exonic hg19 NA CV322157 Out-of-frame Inter-chr p13.2 p11.23 122137 ChimerSeq ChiTaRs ChiTaRs SDC4-SDC4 SDC4 chr20 43968026 SDC4 chr20 43968032 Exonic hg19 NA BF768117 Out-of-frame Intra-chr q13.12 q13.12 122138 ChimerSeq ChiTaRs ChiTaRs ZNF418-PRKCZ ZNF418 chr19 58446741 PRKCZ chr1 2075646 Exonic hg19 NA DA082137 Out-of-frame Inter-chr q13.43 Transcription factor p36.33 122139 ChimerSeq ChiTaRs ChiTaRs MAML2-LOC401491 MAML2 chr11 96059291 LOC401491 chr9 2500534 Exonic hg19 NA BF930077 Out-of-frame Inter-chr q21 Oncogene 122140 ChimerSeq ChiTaRs ChiTaRs SMAD3-TACC1 SMAD3 chr15 67394595 TACC1 chr8 38627561 Exonic hg19 NA BF358787 Out-of-frame Inter-chr q22.33 Transcription factor p11.22 122141 ChimerSeq ChiTaRs ChiTaRs PPP1R15A-PPP1R15A PPP1R15A chr19 49378975 PPP1R15A chr19 49377003 Exonic hg19 NA BF986247 Out-of-frame Intra-chr q13.33 q13.33 122142 ChimerSeq ChiTaRs ChiTaRs LOC100132247-HMP19 LOC100132247 chr16 21862840 HMP19 chr5 173483502 Exonic hg19 NA BX114357 Out-of-frame Inter-chr q35.2 122143 ChimerSeq ChiTaRs ChiTaRs BCAM-ABP1 BCAM chr19 45324671 ABP1 chr7 150557687 Exonic hg19 NA AA367777 Out-of-frame Inter-chr q13.32 122144 ChimerSeq ChiTaRs ChiTaRs FAU-MRPL16 FAU chr11 64888170 MRPL16 chr11 59573821 Exonic hg19 NA BM990847 Out-of-frame Intra-chr q13.1 q12.1 122145 ChimerSeq ChiTaRs ChiTaRs ZNF776-NDRG4 ZNF776 chr19 58235258 NDRG4 chr16 58543071 Exonic hg19 NA DA097267 Out-of-frame Inter-chr q13.43 Transcription factor q21 Tumor suppressor gene 122146 ChimerSeq ChiTaRs ChiTaRs ERBB2-JHDM1D ERBB2 chr17 37874589 JHDM1D chr7 139786130 Exonic hg19 NA AW848707 Out-of-frame Inter-chr q12 Oncogene 122147 ChimerSeq ChiTaRs ChiTaRs MED26-CEP164 MED26 chr19 16664626 CEP164 chr11 117261985 Exonic hg19 NA BF885437 Out-of-frame Inter-chr p13.11 q23.3 122148 ChimerSeq ChiTaRs ChiTaRs UNC13A-UNC13A UNC13A chr19 17729750 UNC13A chr19 17717118 Exonic hg19 NA BE767127 Out-of-frame Intra-chr p13.11 p13.11 122149 ChimerSeq ChiTaRs ChiTaRs CHPT1-CHPT1 CHPT1 chr12 102100130 CHPT1 chr12 102100936 Exonic hg19 NA AA668147 Out-of-frame Intra-chr q23.2 q23.2 122150 ChimerSeq ChiTaRs ChiTaRs ABCD4-ACTN4 ABCD4 chr14 74767233 ACTN4 chr19 39161183 Exonic hg19 NA BG001857 Out-of-frame Inter-chr q24.3 122151 ChimerSeq ChiTaRs ChiTaRs GAB2-GAB2 GAB2 chr11 77931800 GAB2 chr11 77933012 Exonic hg19 NA BF745067 Out-of-frame Intra-chr q14.1 q14.1 122152 ChimerSeq ChiTaRs ChiTaRs CHD6-CHD6 CHD6 chr20 40141623 CHD6 chr20 40143444 Exonic hg19 NA AI312497 Out-of-frame Intra-chr q12 q12 122153 ChimerSeq ChiTaRs ChiTaRs PGM2L1-PGM2L1 PGM2L1 chr11 74047484 PGM2L1 chr11 74047478 Exonic hg19 NA AA665427 Out-of-frame Intra-chr q13.4 q13.4 122154 ChimerSeq ChiTaRs ChiTaRs RAB21-LOC100128714 RAB21 chr12 72180361 LOC100128714 chr15 26279961 Exonic hg19 NA BQ009277 Out-of-frame Inter-chr q21.1 122155 ChimerSeq ChiTaRs ChiTaRs NDFIP2-MKLN1 NDFIP2 chr13 80094316 MKLN1 chr7 131126812 Exonic hg19 NA AA563877 Out-of-frame Inter-chr q31.1 q32.3 122156 ChimerSeq ChiTaRs ChiTaRs LIPI-LIPI LIPI chr21 15561776 LIPI chr21 15561461 Exonic hg19 NA AA483957 Out-of-frame Intra-chr q11.2 q11.2 122157 ChimerSeq ChiTaRs ChiTaRs DEDD2-EPB41L2 DEDD2 chr19 42703694 EPB41L2 chr6 131161228 Exonic hg19 NA BF241187 Out-of-frame Inter-chr q13.2 q23.2 122158 ChimerSeq ChiTaRs ChiTaRs CSDA-VIPR1 CSDA chr12 10875912 VIPR1 chr3 42555258 Exonic hg19 NA X77777 Out-of-frame Inter-chr p22.1 122159 ChimerSeq ChiTaRs ChiTaRs COL4A2-COL4A2 COL4A2 chr13 111125827 COL4A2 chr13 111121669 Exonic hg19 NA BF921767 Out-of-frame Intra-chr q34 q34 122160 ChimerSeq ChiTaRs ChiTaRs ABCC3-ABCC3 ABCC3 chr17 48724193 ABCC3 chr17 48724397 Exonic hg19 NA AI905457 Out-of-frame Intra-chr q21.33 q21.33 122161 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65268470 MALAT1 chr11 65266695 Exonic hg19 NA DW421327 Out-of-frame Intra-chr q13.1 q13.1 122162 ChimerSeq ChiTaRs ChiTaRs SNTB2-ZCRB1 SNTB2 chr16 69298616 ZCRB1 chr12 42707677 Exonic hg19 NA AI922257 Out-of-frame Inter-chr q12 122163 ChimerSeq ChiTaRs ChiTaRs ZMYM5-LNP1 ZMYM5 chr13 20437778 LNP1 chr3 100148586 Exonic hg19 NA BP326227 Out-of-frame Inter-chr q12.11 q12.2 122164 ChimerSeq ChiTaRs ChiTaRs WBP2NL-ELK1 WBP2NL chr22 42448139 ELK1 chrX 47496161 Exonic hg19 NA AA704837 Out-of-frame Inter-chr q13.2 p11.23 Transcription factor 122165 ChimerSeq ChiTaRs ChiTaRs PROSAPIP1-TPP1 PROSAPIP1 chr20 3143399 TPP1 chr11 6635271 Exonic hg19 NA AA367977 Out-of-frame Inter-chr p15.4 122166 ChimerSeq ChiTaRs ChiTaRs NFYB-DNAH1 NFYB chr12 104511290 DNAH1 chr3 52354666 Exonic hg19 NA AL043727 Out-of-frame Inter-chr q23.3 Transcription factor p21.1 122167 ChimerSeq ChiTaRs ChiTaRs MAN2C1-RPL27A MAN2C1 chr15 75655518 RPL27A chr11 8705338 Exonic hg19 NA CR936817 Out-of-frame Inter-chr q24.2 p15.4 122168 ChimerSeq ChiTaRs ChiTaRs MLL-MLL MLL chr11 118391992 MLL chr11 118372433 Exonic hg19 NA DB147747 Out-of-frame Intra-chr q23.3 q23.3 122169 ChimerSeq ChiTaRs ChiTaRs MIRLET7BHG-MIRLET7BHG MIRLET7BHG chr22 46476145 MIRLET7BHG chr22 46479171 Exonic hg19 NA AI598207 Out-of-frame Intra-chr q13.31 q13.31 122170 ChimerSeq ChiTaRs ChiTaRs FBRSL1-LIPF FBRSL1 chr12 133073669 LIPF chr10 90435973 Exonic hg19 NA AW867927 Out-of-frame Inter-chr q24.33 q23.31 122171 ChimerSeq ChiTaRs ChiTaRs MNT-CDK19 MNT chr17 2292868 CDK19 chr6 111043645 Exonic hg19 NA AI244697 Out-of-frame Inter-chr p13.3 Tumor suppressor gene Transcription factor q21 122172 ChimerSeq ChiTaRs ChiTaRs FAM96A-SNED1 FAM96A chr15 64365231 SNED1 chr2 242000601 Exonic hg19 NA BG191637 Out-of-frame Inter-chr q22.31 q37.3 122173 ChimerSeq ChiTaRs ChiTaRs ARHGEF1-ITIH4 ARHGEF1 chr19 42392102 ITIH4 chr3 52853567 Exonic hg19 NA DA281687 Out-of-frame Inter-chr q13.2 p21.1 122174 ChimerSeq ChiTaRs ChiTaRs COTL1-FAM65A COTL1 chr16 84600380 FAM65A chr16 67574653 Exonic hg19 NA BF929177 Out-of-frame Intra-chr q24.1 122175 ChimerSeq ChiTaRs ChiTaRs SYN3-SYN3 SYN3 chr22 33255689 SYN3 chr22 33254055 Exonic hg19 NA BX955227 Out-of-frame Intra-chr q12.3 q12.3 122176 ChimerSeq ChiTaRs ChiTaRs BCAS3-BCAS3 BCAS3 chr17 59293377 BCAS3 chr17 59299378 Exonic hg19 NA DN918887 Out-of-frame Intra-chr q23.2 q23.2 122177 ChimerSeq ChiTaRs ChiTaRs ZNF646-PSMD6 ZNF646 chr16 31089010 PSMD6 chr3 64008056 Exonic hg19 NA CD626167 Out-of-frame Inter-chr p11.2 Transcription factor p14.1 122178 ChimerSeq ChiTaRs ChiTaRs ABCA5-CENPP ABCA5 chr17 67263106 CENPP chr9 95298697 Exonic hg19 NA DW428607 Out-of-frame Inter-chr q24.3 q22.31 122179 ChimerSeq ChiTaRs ChiTaRs IFT52-IFT52 IFT52 chr20 42275862 IFT52 chr20 42271211 Exonic hg19 NA CA450177 3'UTR-CDS Intra-chr q13.12 q13.12 122180 ChimerSeq ChiTaRs ChiTaRs SUZ12-SUZ12 SUZ12 chr17 30320303 SUZ12 chr17 30310084 Exonic hg19 NA AW369467 Out-of-frame Intra-chr q11.2 Tumor suppressor gene q11.2 Tumor suppressor gene 122181 ChimerSeq ChiTaRs ChiTaRs IGFBP4-IGFBP4 IGFBP4 chr17 38613459 IGFBP4 chr17 38613529 Exonic hg19 NA AI750907 Out-of-frame Intra-chr q21.2 Tumor suppressor gene q21.2 Tumor suppressor gene 122182 ChimerSeq ChiTaRs ChiTaRs USP5-SRSF4 USP5 chr12 6975796 SRSF4 chr1 29474349 Exonic hg19 NA CA450247 Out-of-frame Inter-chr p13.31 p35.3 122183 ChimerSeq ChiTaRs ChiTaRs CDK2AP2-CDK2AP2 CDK2AP2 chr11 67274970 CDK2AP2 chr11 67274350 Exonic hg19 NA BF746757 Out-of-frame Intra-chr q13.2 q13.2 122184 ChimerSeq ChiTaRs ChiTaRs RAB27A-SMPDL3A RAB27A chr15 55518133 SMPDL3A chr6 123116857 Exonic hg19 NA BE925967 Out-of-frame Inter-chr q21.3 q22.31 122185 ChimerSeq ChiTaRs ChiTaRs CDC6-GK5 CDC6 chr17 38447820 GK5 chr3 141883363 Exonic hg19 NA BE073887 Out-of-frame Inter-chr q21.2 q23 122186 ChimerSeq ChiTaRs ChiTaRs SRCAP-SRCAP SRCAP chr16 30736053 SRCAP chr16 30735462 Exonic hg19 NA BP270137 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Transcription factor 122187 ChimerSeq ChiTaRs ChiTaRs CNDP2-PAX8 CNDP2 chr18 72176450 PAX8 chr2 114001208 Exonic hg19 NA BQ329957 Out-of-frame Inter-chr q22.3 Tumor suppressor gene q14.1 Oncogene Transcription factor 122188 ChimerSeq ChiTaRs ChiTaRs ULK1-NLGN2 ULK1 chr12 132395219 NLGN2 chr17 7312852 Exonic hg19 NA BF741187 Out-of-frame Inter-chr q24.33 Other:ULK 122189 ChimerSeq ChiTaRs ChiTaRs SETD1A-ASPH SETD1A chr16 30970457 ASPH chr8 62492380 Exonic hg19 NA BU158317 Out-of-frame Inter-chr p11.2 q12.3 122190 ChimerSeq ChiTaRs ChiTaRs ALDH3A2-LOC646214 ALDH3A2 chr17 19569840 LOC646214 chr15 21933563 Exonic hg19 NA AV652827 Out-of-frame Inter-chr p11.2 122191 ChimerSeq ChiTaRs ChiTaRs WDR16-C17orf70 WDR16 chr17 9490151 C17orf70 chr17 79517870 Exonic hg19 NA BM563447 In-Frame Intra-chr 122192 ChimerSeq ChiTaRs ChiTaRs RALGAPA1-PRRC2B RALGAPA1 chr14 36064997 PRRC2B chr9 134371910 Exonic hg19 NA DQ786317 Out-of-frame Inter-chr q13.2 q34.13 122193 ChimerSeq ChiTaRs ChiTaRs IGDCC3-KIF3B IGDCC3 chr15 65621004 KIF3B chr20 30922597 Exonic hg19 NA R23707 Out-of-frame Inter-chr q22.31 q11.21 122194 ChimerSeq ChiTaRs ChiTaRs RRBP1-RRBP1 RRBP1 chr20 17600321 RRBP1 chr20 17640929 Exonic hg19 NA CB048557 Out-of-frame Intra-chr p12.1 p12.1 122195 ChimerSeq ChiTaRs ChiTaRs PTPRA-SLC48A1 PTPRA chr20 2962677 SLC48A1 chr12 48176509 Exonic hg19 NA AK024387 Out-of-frame Inter-chr p13 q13.11 122196 ChimerSeq ChiTaRs ChiTaRs ZNRF1-ZNRF1 ZNRF1 chr16 75088577 ZNRF1 chr16 75090783 Exonic hg19 NA BI022207 Out-of-frame Intra-chr q23.1 q23.1 122197 ChimerSeq ChiTaRs ChiTaRs SUN2-ULK1 SUN2 chr22 39135775 ULK1 chr12 132405706 Exonic hg19 NA BM808097 Out-of-frame Inter-chr q13.1 q24.33 Other:ULK 122198 ChimerSeq ChiTaRs ChiTaRs GNB1L-CRTC3 GNB1L chr22 19781177 CRTC3 chr15 91172485 Exonic hg19 NA BF512137 Out-of-frame Inter-chr q11.21 q26.1 122199 ChimerSeq ChiTaRs ChiTaRs PACSIN2-PACSIN2 PACSIN2 chr22 43274894 PACSIN2 chr22 43267211 Exonic hg19 NA BI011337 Out-of-frame Intra-chr q13.2 q13.2 122200 ChimerSeq ChiTaRs ChiTaRs PDE8A-IPO5 PDE8A chr15 85645428 IPO5 chr13 98662387 Exonic hg19 NA BF770537 Out-of-frame Inter-chr q25.3 q32.2 122201 ChimerSeq ChiTaRs ChiTaRs B2M-B2M B2M chr15 45010282 B2M chr15 45007782 Exonic hg19 NA AW371027 Out-of-frame Intra-chr Oncogene Oncogene 122202 ChimerSeq ChiTaRs ChiTaRs DDX5-ELOVL5 DDX5 chr17 62499369 ELOVL5 chr6 53138076 Exonic hg19 NA BF096087 Out-of-frame Inter-chr q23.3 p12.1 122203 ChimerSeq ChiTaRs ChiTaRs GOLGA3-HUWE1 GOLGA3 chr12 133402846 HUWE1 chrX 53564547 Exonic hg19 NA AI268307 Out-of-frame Inter-chr q24.33 p11.22 122204 ChimerSeq ChiTaRs ChiTaRs PRR4-RNPEP PRR4 chr12 10999802 RNPEP chr1 201965139 Exonic hg19 NA BF355937 Out-of-frame Inter-chr q32.1 122205 ChimerSeq ChiTaRs ChiTaRs TRBV20-1-SLC1A5 TRBV20-1 chr16 2025611 SLC1A5 chr19 47291467 Exonic hg19 NA CN354917 Out-of-frame Inter-chr q13.32 122206 ChimerSeq ChiTaRs ChiTaRs ATP2A2-WNT9B ATP2A2 chr12 110785841 WNT9B chr17 44963444 Exonic hg19 NA BF921697 Out-of-frame Inter-chr q24.11 122207 ChimerSeq ChiTaRs ChiTaRs FER1L4-ADAM12 FER1L4 chr20 34170034 ADAM12 chr10 127781007 Exonic hg19 NA BF993607 Out-of-frame Inter-chr q11.22 Tumor suppressor gene q26.2 122208 ChimerSeq ChiTaRs ChiTaRs DLGAP4-DLGAP4 DLGAP4 chr20 35145087 DLGAP4 chr20 35146055 Exonic hg19 NA BM929277 Out-of-frame Intra-chr q11.23 q11.23 122209 ChimerSeq ChiTaRs ChiTaRs RBM39-RBM39 RBM39 chr20 34300455 RBM39 chr20 34299514 Exonic hg19 NA DW409707 Out-of-frame Intra-chr q11.22 q11.22 122210 ChimerSeq ChiTaRs ChiTaRs SLC8A3-MEIS3 SLC8A3 chr14 70511641 MEIS3 chr19 47906381 Exonic hg19 NA CR749687 Out-of-frame Inter-chr q24.2 q13.32 Transcription factor 122211 ChimerSeq ChiTaRs ChiTaRs MALAT1-LAMP2 MALAT1 chr11 65271222 LAMP2 chrX 119570562 Exonic hg19 NA AW995767 Out-of-frame Inter-chr q13.1 q24 122212 ChimerSeq ChiTaRs ChiTaRs PDE8A-PDE8A PDE8A chr15 85666402 PDE8A chr15 85660947 Exonic hg19 NA BF951597 Out-of-frame Intra-chr q25.3 q25.3 122213 ChimerSeq ChiTaRs ChiTaRs NEMF-NEMF NEMF chr14 50267197 NEMF chr14 50255863 Exonic hg19 NA BU685747 Out-of-frame Intra-chr q21.3 q21.3 122214 ChimerSeq ChiTaRs ChiTaRs STAT6-IFITM2 STAT6 chr12 57504935 IFITM2 chr11 308147 Exonic hg19 NA BF848797 Out-of-frame Inter-chr q13.3 Transcription factor p15.5 122215 ChimerSeq ChiTaRs ChiTaRs CLTCL1-PLA2G6 CLTCL1 chr22 19228511 PLA2G6 chr22 38560516 Exonic hg19 NA CV375347 Out-of-frame Intra-chr q11.21 q13.1 122216 ChimerSeq ChiTaRs ChiTaRs NUDT22-NUDT22 NUDT22 chr11 63994188 NUDT22 chr11 63994172 Exonic hg19 NA BF954607 Out-of-frame Intra-chr q13.1 q13.1 122217 ChimerSeq ChiTaRs ChiTaRs H1F0-KLF4 H1F0 chr22 38202562 KLF4 chr9 110247908 Exonic hg19 NA AW748267 Out-of-frame Inter-chr q13.1 q31.2 Oncogene Tumor suppressor gene Transcription factor 122218 ChimerSeq ChiTaRs ChiTaRs MYH10-ARHGEF10L MYH10 chr17 8377725 ARHGEF10L chr1 18020845 Exonic hg19 NA T33537 Out-of-frame Inter-chr p13.1 p36.13 122219 ChimerSeq ChiTaRs ChiTaRs RNF185-ESRRG RNF185 chr22 31597528 ESRRG chr1 217047111 Exonic hg19 NA BG333167 Out-of-frame Inter-chr q12.2 q41 Transcription factor 122220 ChimerSeq ChiTaRs ChiTaRs MAPRE2-MAPRE2 MAPRE2 chr18 32721045 MAPRE2 chr18 32721754 Exonic hg19 NA U90437 Out-of-frame Intra-chr q12.1 q12.1 122221 ChimerSeq ChiTaRs ChiTaRs SIK3-SIK3 SIK3 chr11 116732973 SIK3 chr11 116738781 Exonic hg19 NA BQ368987 Out-of-frame Intra-chr q23.3 q23.3 122222 ChimerSeq ChiTaRs ChiTaRs DNM1L-CDC20B DNM1L chr12 32879547 CDC20B chr5 54460646 Exonic hg19 NA DA736127 Out-of-frame Inter-chr p11.21 q11.2 122223 ChimerSeq ChiTaRs ChiTaRs SGSM2-BTG2 SGSM2 chr17 2283315 BTG2 chr1 203277315 Exonic hg19 NA BI060627 Out-of-frame Inter-chr p13.3 Transcription factor q32.1 Tumor suppressor gene 122224 ChimerSeq ChiTaRs ChiTaRs POSTN-POSTN POSTN chr13 38153029 POSTN chr13 38143932 Exonic hg19 NA AI751337 Out-of-frame Intra-chr q13.3 q13.3 122225 ChimerSeq ChiTaRs ChiTaRs PRKCA-PAFAH1B1 PRKCA chr17 64411088 PAFAH1B1 chr17 2570340 Exonic hg19 NA L13387 Out-of-frame Intra-chr q24.2 p13.3 Tumor suppressor gene 122226 ChimerSeq ChiTaRs ChiTaRs PER1-IKBKB PER1 chr17 8055701 IKBKB chr8 42183128 Exonic hg19 NA BC110917 Out-of-frame Inter-chr p13.1 Oncogene p11.21 Oncogene 122227 ChimerSeq ChiTaRs ChiTaRs ATXN2-ATXN2 ATXN2 chr12 111991874 ATXN2 chr12 111994200 Exonic hg19 NA BF842587 Out-of-frame Intra-chr q24.12 q24.12 122228 ChimerSeq ChiTaRs ChiTaRs C16orf58-FBL C16orf58 chr16 31510689 FBL chr19 40330872 Exonic hg19 NA BU556777 In-Frame Inter-chr p11.2 122229 ChimerSeq ChiTaRs ChiTaRs USF2-USF2 USF2 chr19 35760064 USF2 chr19 35760565 Exonic hg19 NA S50537 Out-of-frame Intra-chr q13.12 Transcription factor q13.12 Transcription factor 122230 ChimerSeq ChiTaRs ChiTaRs ARL4D-ARL4D ARL4D chr17 41478379 ARL4D chr17 41478342 Exonic hg19 NA BM725007 Out-of-frame Intra-chr q21.31 q21.31 122231 ChimerSeq ChiTaRs ChiTaRs KRT13-MUC21 KRT13 chr17 39661864 MUC21 chr6 2248357 Exonic hg19 NA DA764817 Out-of-frame Inter-chr q21.2 122232 ChimerSeq ChiTaRs ChiTaRs KRT4-KRT4 KRT4 chr12 53200681 KRT4 chr12 53200333 Exonic hg19 NA AW872697 Out-of-frame Intra-chr q13.13 q13.13 122233 ChimerSeq ChiTaRs ChiTaRs WWOX-ATP11A WWOX chr16 78534493 ATP11A chr13 113464639 Exonic hg19 NA BF871847 Out-of-frame Inter-chr q23.1 Tumor suppressor gene q34 122234 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65267783 MALAT1 chr11 65267762 Exonic hg19 NA BQ329707 Out-of-frame Intra-chr q13.1 q13.1 122235 ChimerSeq ChiTaRs ChiTaRs WDR20-AKT3 WDR20 chr14 102675993 AKT3 chr1 243671210 Exonic hg19 NA BF935477 Out-of-frame Inter-chr q32.31 AGC:Akt Oncogene 122236 ChimerSeq ChiTaRs ChiTaRs KCNE3-PSME1 KCNE3 chr11 74176041 PSME1 chr14 24606001 Exonic hg19 NA BI048257 Out-of-frame Inter-chr q13.4 q12 122237 ChimerSeq ChiTaRs ChiTaRs PLD3-CAPZA1 PLD3 chr19 40884397 CAPZA1 chr1 113207780 Exonic hg19 NA BE295537 Out-of-frame Inter-chr q13.2 p13.2 122238 ChimerSeq ChiTaRs ChiTaRs ZDHHC20-MTHFD2L ZDHHC20 chr13 22033450 MTHFD2L chr4 75065511 Exonic hg19 NA AK023167 Out-of-frame Inter-chr q12.11 q13.3 122239 ChimerSeq ChiTaRs ChiTaRs DSCAM-EXT1 DSCAM chr21 42162076 EXT1 chr8 118835645 Exonic hg19 NA BF749377 Out-of-frame Inter-chr q22.2 q24.11 Oncogene Tumor suppressor gene 122240 ChimerSeq ChiTaRs ChiTaRs BCL2L1-BCL2L1 BCL2L1 chr20 30258733 BCL2L1 chr20 30257947 Exonic hg19 NA BF356057 Out-of-frame Intra-chr q11.21 Oncogene q11.21 Oncogene 122241 ChimerSeq ChiTaRs ChiTaRs NDRG3-NDRG3 NDRG3 chr20 35280833 NDRG3 chr20 35309219 Exonic hg19 NA CB217677 Out-of-frame Intra-chr q11.23 q11.23 122242 ChimerSeq ChiTaRs ChiTaRs LGALS3-LGALS3 LGALS3 chr14 55612137 LGALS3 chr14 55611961 Exonic hg19 NA BM969627 Out-of-frame Intra-chr q22.3 q22.3 122243 ChimerSeq ChiTaRs ChiTaRs MALAT1-TPM1 MALAT1 chr11 65266848 TPM1 chr15 63351760 Exonic hg19 NA AW864167 Out-of-frame Inter-chr q13.1 q22.2 122244 ChimerSeq ChiTaRs ChiTaRs TUBB4A-RBM20 TUBB4A chr19 6494933 RBM20 chr10 112494468 Exonic hg19 NA AA683237 Out-of-frame Inter-chr p13.3 q25.2 122245 ChimerSeq ChiTaRs ChiTaRs LHFP-LHFP LHFP chr13 39917398 LHFP chr13 39917416 Exonic hg19 NA AW608337 Out-of-frame Intra-chr q14.11 q14.11 122246 ChimerSeq ChiTaRs ChiTaRs SEC14L1-SEC14L1 SEC14L1 chr17 75202257 SEC14L1 chr17 75202023 Exonic hg19 NA DW443827 Out-of-frame Intra-chr q25.2 q25.2 122247 ChimerSeq ChiTaRs ChiTaRs MOK-TFCP2L1 MOK chr14 102712584 TFCP2L1 chr2 122038664 Exonic hg19 NA BU166617 Out-of-frame Inter-chr q32.31 CMGC:RCK q14.2 Transcription factor 122248 ChimerSeq ChiTaRs ChiTaRs PGAM5-IDS PGAM5 chr12 133299320 IDS chrX 148560838 Exonic hg19 NA BU735117 Out-of-frame Inter-chr q24.33 q28 122249 ChimerSeq ChiTaRs ChiTaRs CLASRP-CLASRP CLASRP chr19 45574213 CLASRP chr19 45571652 Exonic hg19 NA AI936967 Out-of-frame Intra-chr q13.32 q13.32 122250 ChimerSeq ChiTaRs ChiTaRs RPSAP52-ELAC2 RPSAP52 chr12 66221868 ELAC2 chr17 12898318 Exonic hg19 NA BQ073577 Out-of-frame Inter-chr q14.3 p12 122251 ChimerSeq ChiTaRs ChiTaRs DSCAM-DCAF7 DSCAM chr21 41718140 DCAF7 chr17 61667668 Exonic hg19 NA R06057 Out-of-frame Inter-chr q22.2 q23.3 122252 ChimerSeq ChiTaRs ChiTaRs FAM134C-IDUA FAM134C chr17 40732590 IDUA chr4 992259 Exonic hg19 NA BE939137 Out-of-frame Inter-chr p16.3 122253 ChimerSeq ChiTaRs ChiTaRs GPN3-GPN3 GPN3 chr12 110893487 GPN3 chr12 110893620 Exonic hg19 NA AW975187 Out-of-frame Intra-chr q24.11 q24.11 122254 ChimerSeq ChiTaRs ChiTaRs BOLA2-MRPL32 BOLA2 chr16 30081733 MRPL32 chr7 42971975 Exonic hg19 NA BQ437667 Out-of-frame Inter-chr p11.2 p14.1 122255 ChimerSeq ChiTaRs ChiTaRs OIP5-AS1-PTN OIP5-AS1 chr15 41588051 PTN chr7 136912508 Exonic hg19 NA AW379067 Out-of-frame Inter-chr q15.1 q33 Tumor suppressor gene 122256 ChimerSeq ChiTaRs ChiTaRs NPAS3-NPAS3 NPAS3 chr14 34255886 NPAS3 chr14 34255875 Exonic hg19 NA CR738457 Out-of-frame Intra-chr q13.1 Transcription factor q13.1 Transcription factor 122257 ChimerSeq ChiTaRs ChiTaRs DONSON-PARG DONSON chr21 35288085 PARG chr10 51579193 Exonic hg19 NA DB069377 Out-of-frame Inter-chr q22.11 q11.23 122258 ChimerSeq ChiTaRs ChiTaRs PCBP2-UBR4 PCBP2 chr12 53870163 UBR4 chr1 19409860 Exonic hg19 NA BE830517 Out-of-frame Inter-chr q13.13 p36.13 122259 ChimerSeq ChiTaRs ChiTaRs CSNK1E-MOB3A CSNK1E chr22 38710124 MOB3A chr19 2076887 Exonic hg19 NA BI029107 Out-of-frame Inter-chr q13.1 p13.3 122260 ChimerSeq ChiTaRs ChiTaRs MARCH9-MARCH9 2009_ 3_ 1_ chr12 58152608 2009_ 3_ 1_ chr12 58152657 Exonic hg19 NA AW883997 Out-of-frame Intra-chr 122261 ChimerSeq ChiTaRs ChiTaRs SNRNP70-SNRNP70 SNRNP70 chr19 49604676 SNRNP70 chr19 49607838 Exonic hg19 NA BQ325997 Out-of-frame Intra-chr q13.33 q13.33 122262 ChimerSeq ChiTaRs ChiTaRs RPL13A-LCAT RPL13A chr19 49995310 LCAT chr16 67973786 Exonic hg19 NA X06537 3'UTR-3'UTR Inter-chr q13.33 q22.1 122263 ChimerSeq ChiTaRs ChiTaRs PCK1-PAPPA2 PCK1 chr20 56141510 PAPPA2 chr1 176802967 Exonic hg19 NA AW195637 Out-of-frame Inter-chr q13.31 q25.2 122264 ChimerSeq ChiTaRs ChiTaRs HBA1-GATA1 HBA1 chr16 227503 GATA1 chrX 48651594 Exonic hg19 NA AI064977 Out-of-frame Inter-chr p13.3 p11.23 Oncogene Transcription factor 122265 ChimerSeq ChiTaRs ChiTaRs HSPA8-HSPA8 HSPA8 chr11 122929149 HSPA8 chr11 122930401 Exonic hg19 NA BF885577 Out-of-frame Intra-chr q24.1 q24.1 122266 ChimerSeq ChiTaRs ChiTaRs PIAS1-PIAS1 PIAS1 chr15 68398034 PIAS1 chr15 68389899 Exonic hg19 NA CR933617 Out-of-frame Intra-chr q23 Tumor suppressor gene q23 Tumor suppressor gene 122267 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65266738 MALAT1 chr11 65269176 Exonic hg19 NA DW407607 Out-of-frame Intra-chr q13.1 q13.1 122268 ChimerSeq ChiTaRs ChiTaRs CSHL1-PPP6R3 CSHL1 chr17 61987052 PPP6R3 chr11 68325617 Exonic hg19 NA BF990157 Out-of-frame Inter-chr q23.3 q13.2 122269 ChimerSeq ChiTaRs ChiTaRs ANKRD11-ANKRD11 ANKRD11 chr16 89350746 ANKRD11 chr16 89349869 Exonic hg19 NA BF084757 Out-of-frame Intra-chr q24.3 q24.3 122270 ChimerSeq ChiTaRs ChiTaRs NEAT1-AMPD2 NEAT1 chr11 65190525 AMPD2 chr1 110172058 Exonic hg19 NA BC030217 Out-of-frame Inter-chr q13.1 p13.3 122271 ChimerSeq ChiTaRs ChiTaRs HYOU1-HYOU1 HYOU1 chr11 118921812 HYOU1 chr11 118922265 Exonic hg19 NA AA356687 Out-of-frame Intra-chr 122272 ChimerSeq ChiTaRs ChiTaRs MDM2-RINT1 MDM2 chr12 69233841 RINT1 chr7 105203315 Exonic hg19 NA CR748127 Out-of-frame Inter-chr q15 Oncogene q22.3 Tumor suppressor gene 122273 ChimerSeq ChiTaRs ChiTaRs ATP6V0A1-WDR59 ATP6V0A1 chr17 40674597 WDR59 chr16 74936803 Exonic hg19 NA BM674717 3'UTR-CDS Inter-chr q21.2 q23.1 122274 ChimerSeq ChiTaRs ChiTaRs KAT2A-ACSM1 KAT2A chr17 40265561 ACSM1 chr16 20688194 Exonic hg19 NA BF932027 Out-of-frame Inter-chr q21.2 p12.3 122275 ChimerSeq ChiTaRs ChiTaRs SYS1-PSMD2 SYS1 chr20 43996755 PSMD2 chr3 184019372 Exonic hg19 NA AI201767 Out-of-frame Inter-chr q13.12 q27.1 122276 ChimerSeq ChiTaRs ChiTaRs MAPK8IP3-NXN MAPK8IP3 chr16 1791428 NXN chr17 783948 Exonic hg19 NA BF376797 Out-of-frame Inter-chr p13.3 p13.3 122277 ChimerSeq ChiTaRs ChiTaRs RILPL1-TUBB4A RILPL1 chr12 123969063 TUBB4A chr19 6494559 Exonic hg19 NA BF945627 Out-of-frame Inter-chr q24.31 p13.3 122278 ChimerSeq ChiTaRs ChiTaRs GSTT1-SLC2A11 GSTT1 chr22 24384230 SLC2A11 chr22 24217301 Exonic hg19 NA CN352897 Out-of-frame Intra-chr Tumor suppressor gene q11.23 122279 ChimerSeq ChiTaRs ChiTaRs LMF2-CTRL LMF2 chr22 50941695 CTRL chr16 67964013 Exonic hg19 NA BF063267 Out-of-frame Inter-chr q13.33 q22.1 122280 ChimerSeq ChiTaRs ChiTaRs WIBG-OAZ1 WIBG chr12 56296005 OAZ1 chr19 2273131 Exonic hg19 NA BU564747 Out-of-frame Inter-chr 12q13.2 p13.3 122281 ChimerSeq ChiTaRs ChiTaRs PPHLN1-PPHLN1 PPHLN1 chr12 42768784 PPHLN1 chr12 42792685 Exonic hg19 NA BE841207 Out-of-frame Intra-chr q12 q12 122282 ChimerSeq ChiTaRs ChiTaRs U2AF2-U2AF2 U2AF2 chr19 56185889 U2AF2 chr19 56173953 Exonic hg19 NA CN409107 Out-of-frame Intra-chr q13.42 q13.42 122283 ChimerSeq ChiTaRs ChiTaRs SF3B2-SF3B2 SF3B2 chr11 65828204 SF3B2 chr11 65827344 Exonic hg19 NA BF820297 Out-of-frame Intra-chr q13.1 q13.1 122284 ChimerSeq ChiTaRs ChiTaRs PELI2-USP28 PELI2 chr14 56711060 USP28 chr11 113691091 Exonic hg19 NA CV380517 Out-of-frame Inter-chr q22.3 q23.2 122285 ChimerSeq ChiTaRs ChiTaRs LOXHD1-OLFM4 LOXHD1 chr18 44069351 OLFM4 chr13 53607269 Exonic hg19 NA BI481187 Out-of-frame Inter-chr q21.1 q14.3 Tumor suppressor gene 122286 ChimerSeq ChiTaRs ChiTaRs MDM2-COMMD2 MDM2 chr12 69222637 COMMD2 chr3 149458687 Exonic hg19 NA BQ223057 Out-of-frame Inter-chr q15 Oncogene q25.1 122287 ChimerSeq ChiTaRs ChiTaRs TOM1L1-MSX2 TOM1L1 chr17 53036798 MSX2 chr5 174157763 Exonic hg19 NA BU963567 Out-of-frame Inter-chr q22 q35.2 Transcription factor 122288 ChimerSeq ChiTaRs ChiTaRs MYCBP2-PCBP2 MYCBP2 chr13 77779651 PCBP2 chr12 53856264 Exonic hg19 NA T05177 Out-of-frame Inter-chr q22.3 q13.13 122289 ChimerSeq ChiTaRs ChiTaRs NR4A1-NR4A1 NR4A1 chr12 52453057 NR4A1 chr12 52452701 Exonic hg19 NA AA557827 Out-of-frame Intra-chr q13.13 Tumor suppressor gene Transcription factor q13.13 Tumor suppressor gene Transcription factor 122290 ChimerSeq ChiTaRs ChiTaRs DYNC1H1-TMPRSS4 DYNC1H1 chr14 102460347 TMPRSS4 chr11 117966123 Exonic hg19 NA BF766787 Out-of-frame Inter-chr q32.31 q23.3 122291 ChimerSeq ChiTaRs ChiTaRs IFI35-PPIP5K2 IFI35 chr17 41166471 PPIP5K2 chr5 102538385 Exonic hg19 NA AW976767 Out-of-frame Inter-chr q21.31 q21.1 122292 ChimerSeq ChiTaRs ChiTaRs GRIP1-TBL1XR1 GRIP1 chr12 67131135 TBL1XR1 chr3 176817152 Exonic hg19 NA BQ447327 Out-of-frame Inter-chr q14.3 q26.32 122293 ChimerSeq ChiTaRs ChiTaRs BOLA2-ACTA1 BOLA2 chr16 30080868 ACTA1 chr1 229567196 Exonic hg19 NA CF552597 Out-of-frame Inter-chr p11.2 q42.13 122294 ChimerSeq ChiTaRs ChiTaRs STAU1-STAU1 STAU1 chr20 47782802 STAU1 chr20 47790740 Exonic hg19 NA AU185087 Out-of-frame Intra-chr q13.13 q13.13 122295 ChimerSeq ChiTaRs ChiTaRs PDXDC1-PDXDC1 PDXDC1 chr16 15131110 PDXDC1 chr16 15123807 Exonic hg19 NA BI021257 3'UTR-CDS Intra-chr p13.11 p13.11 122296 ChimerSeq ChiTaRs ChiTaRs CEP170B-OLFM2 CEP170B chr14 105428282 OLFM2 chr19 10018095 Exonic hg19 NA AM930524 Out-of-frame Inter-chr q32.33 p13.2 122297 ChimerSeq ChiTaRs ChiTaRs TMEM8A-GPX4 TMEM8A chr16 421940 GPX4 chr19 1104846 Exonic hg19 NA BI055467 Out-of-frame Inter-chr p13.3 p13.3 122298 ChimerSeq ChiTaRs ChiTaRs B2M-B2M B2M chr15 45009874 B2M chr15 45009837 Exonic hg19 NA BG759197 Out-of-frame Intra-chr Oncogene Oncogene 122299 ChimerSeq ChiTaRs ChiTaRs GCN1L1-STAB1 GCN1L1 chr12 120594297 STAB1 chr3 52556814 Exonic hg19 NA BI038647 Out-of-frame Inter-chr p21.1 122300 ChimerSeq ChiTaRs ChiTaRs TTLL9-CTNNB1 TTLL9 chr20 30469688 CTNNB1 chr3 41280671 Exonic hg19 NA DB360697 Out-of-frame Inter-chr q11.21 p22.1 Oncogene 122301 ChimerSeq ChiTaRs ChiTaRs CPNE2-CPNE2 CPNE2 chr16 57155624 CPNE2 chr16 57155648 Exonic hg19 NA AW896677 Out-of-frame Intra-chr q13 q13 122302 ChimerSeq ChiTaRs ChiTaRs SYNE2-SYNE2 SYNE2 chr14 64676228 SYNE2 chr14 64653262 Exonic hg19 NA BE930507 Out-of-frame Intra-chr q23.2 q23.2 122303 ChimerSeq ChiTaRs ChiTaRs GNPTAB-ARID2 GNPTAB chr12 102139569 ARID2 chr12 46127630 Exonic hg19 NA AI027747 Out-of-frame Intra-chr q23.2 q12 Oncogene Tumor suppressor gene Transcription factor 122304 ChimerSeq ChiTaRs ChiTaRs KLK6-BAD KLK6 chr19 51471947 BAD chr11 64046471 Exonic hg19 NA BE717737 Out-of-frame Inter-chr q13.41 Tumor suppressor gene q13.1 122305 ChimerSeq ChiTaRs ChiTaRs IDH3A-IDH3A IDH3A chr15 78462002 IDH3A chr15 78461510 Exonic hg19 NA AI571707 Out-of-frame Intra-chr q25.1 q25.1 122306 ChimerSeq ChiTaRs ChiTaRs MED1-HPCAL4 MED1 chr17 37565638 HPCAL4 chr1 40144653 Exonic hg19 NA H19757 Out-of-frame Inter-chr q12 Tumor suppressor gene p34.2 122307 ChimerSeq ChiTaRs ChiTaRs HELZ-ATP2A2 HELZ chr17 65076657 ATP2A2 chr12 110723992 Exonic hg19 NA BG979337 Out-of-frame Inter-chr q24.2 q24.11 122308 ChimerSeq ChiTaRs ChiTaRs NCOR2-RPL14 NCOR2 chr12 125002840 RPL14 chr3 40503542 Exonic hg19 NA BC033087 Out-of-frame Inter-chr q24.31 p22.1 122309 ChimerSeq ChiTaRs ChiTaRs HKR1-HKR1 HKR1 chr19 37853948 HKR1 chr19 37853956 Exonic hg19 NA BF352587 Out-of-frame Intra-chr q13.12 Transcription factor q13.12 Transcription factor 122310 ChimerSeq ChiTaRs ChiTaRs MRPL52-MRPL52 MRPL52 chr14 23301455 MRPL52 chr14 23301468 Exonic hg19 NA BF509847 Out-of-frame Intra-chr q11.2 q11.2 122311 ChimerSeq ChiTaRs ChiTaRs PSMC4-WNT7B PSMC4 chr19 40487348 WNT7B chr22 46316306 Exonic hg19 NA AI143487 Out-of-frame Inter-chr q13.31 122312 ChimerSeq ChiTaRs ChiTaRs CPM-KIAA1161 CPM chr12 69316745 KIAA1161 chr9 34369680 Exonic hg19 NA BF590847 Out-of-frame Inter-chr q15 p13.3 122313 ChimerSeq ChiTaRs ChiTaRs ZFYVE1-UBTD1 ZFYVE1 chr14 73446521 UBTD1 chr10 99314666 Exonic hg19 NA BE182407 Out-of-frame Inter-chr q24.2 q24.1 122314 ChimerSeq ChiTaRs ChiTaRs NCOA5-NCOA5 NCOA5 chr20 44691656 NCOA5 chr20 44691668 Exonic hg19 NA BG997187 Out-of-frame Intra-chr q13.12 Tumor suppressor gene q13.12 Tumor suppressor gene 122315 ChimerSeq ChiTaRs ChiTaRs ERH-ELK4 ERH chr14 69846917 ELK4 chr1 205599497 Exonic hg19 NA AI420217 Out-of-frame Inter-chr q24.1 q32.1 Transcription factor 122316 ChimerSeq ChiTaRs ChiTaRs CDK17-GPR126 CDK17 chr12 96793024 GPR126 chr6 142630717 Exonic hg19 NA BP234687 Out-of-frame Inter-chr q23.1 122317 ChimerSeq ChiTaRs ChiTaRs SIRPA-HNRNPUL2 SIRPA chr20 1920538 HNRNPUL2 chr11 62491868 Exonic hg19 NA BF062437 Out-of-frame Inter-chr p13 q12.3 122318 ChimerSeq ChiTaRs ChiTaRs SLC5A1-SLC5A1 SLC5A1 chr22 32466884 SLC5A1 chr22 32466949 Exonic hg19 NA AW135987 Out-of-frame Intra-chr q12.3 q12.3 122319 ChimerSeq ChiTaRs ChiTaRs NEAT1-NEAT1 NEAT1 chr11 65190810 NEAT1 chr11 65194978 Exonic hg19 NA BE843367 Out-of-frame Intra-chr q13.1 q13.1 122320 ChimerSeq ChiTaRs ChiTaRs CCP110-PTMS CCP110 chr16 19535330 PTMS chr12 6879720 Exonic hg19 NA BM041237 Out-of-frame Inter-chr p12.3 p13.31 122321 ChimerSeq ChiTaRs ChiTaRs MCAM-SNAR-C4 MCAM chr11 119187818 SNAR-C4 chr19 48442815 Exonic hg19 NA M29277 Out-of-frame Inter-chr q23.3 122322 ChimerSeq ChiTaRs ChiTaRs STAT5B-CPNE3 STAT5B chr17 40351698 CPNE3 chr8 87560620 Exonic hg19 NA BE082977 Out-of-frame Inter-chr q21.2 Transcription factor q21.3 122323 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65266819 MALAT1 chr11 65267470 Exonic hg19 NA BQ632547 Out-of-frame Intra-chr q13.1 q13.1 122324 ChimerSeq ChiTaRs ChiTaRs MALAT1-CDH2 MALAT1 chr11 65266676 CDH2 chr18 25591108 Exonic hg19 NA DW419187 Out-of-frame Inter-chr q13.1 q12.1 Oncogene 122325 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65267625 MALAT1 chr11 65266715 Exonic hg19 NA DW464867 Out-of-frame Intra-chr q13.1 q13.1 122326 ChimerSeq ChiTaRs ChiTaRs LRTOMT-MTSS1L LRTOMT chr11 71806183 MTSS1L chr16 70710030 Exonic hg19 NA BF904917 Out-of-frame Inter-chr q13.4 q22.1 122327 ChimerSeq ChiTaRs ChiTaRs ATN1-BRPF3 ATN1 chr12 7045660 BRPF3 chr6 36195716 Exonic hg19 NA BG004007 Out-of-frame Inter-chr p13.31 p21.31 122328 ChimerSeq ChiTaRs ChiTaRs SNW1-SNW1 SNW1 chr14 78187128 SNW1 chr14 78184108 Exonic hg19 NA BM450257 Out-of-frame Intra-chr q24.3 q24.3 122329 ChimerSeq ChiTaRs ChiTaRs CMIP-TPX2 CMIP chr16 81598907 TPX2 chr20 30389116 Exonic hg19 NA BF932217 Out-of-frame Inter-chr q23.2 q11.21 122330 ChimerSeq ChiTaRs ChiTaRs MTHFD1-UVRAG MTHFD1 chr14 64905879 UVRAG chr11 75852850 Exonic hg19 NA BE707197 Out-of-frame Inter-chr q23.3 q13.5 Tumor suppressor gene 122331 ChimerSeq ChiTaRs ChiTaRs RPN2-RPN2 RPN2 chr20 35857107 RPN2 chr20 35833209 Exonic hg19 NA BE075537 Out-of-frame Intra-chr q11.23 q11.23 122332 ChimerSeq ChiTaRs ChiTaRs TAF1D-TRUB1 TAF1D chr11 93469466 TRUB1 chr10 116735390 Exonic hg19 NA BF801407 Out-of-frame Inter-chr q21 q25.3 122333 ChimerSeq ChiTaRs ChiTaRs ZNF160-ZNF521 ZNF160 chr19 53571743 ZNF521 chr18 22870084 Exonic hg19 NA BF986037 Out-of-frame Inter-chr q13.42 Transcription factor q11.2 Oncogene Transcription factor 122334 ChimerSeq ChiTaRs ChiTaRs SMARCB1-ANKRD28 SMARCB1 chr22 24176700 ANKRD28 chr3 15711424 Exonic hg19 NA U04847 Out-of-frame Inter-chr q11.23 Oncogene Tumor suppressor gene p25.1 122335 ChimerSeq ChiTaRs ChiTaRs ADPGK-ADPGK ADPGK chr15 73044555 ADPGK chr15 73044318 Exonic hg19 NA BU742597 Out-of-frame Intra-chr q24.1 q24.1 122336 ChimerSeq ChiTaRs ChiTaRs RTDR1-SORCS2 RTDR1 chr22 23467219 SORCS2 chr4 7675362 Exonic hg19 NA AA872127 Out-of-frame Inter-chr p16.1 122337 ChimerSeq ChiTaRs ChiTaRs RNASEK-C17orf49-IKBKE RNASEK-C17orf49 chr17 6917849 IKBKE chr1 206648299 Exonic hg19 NA AI424747 Out-of-frame Inter-chr p13.1 q32.1 122338 ChimerSeq ChiTaRs ChiTaRs RAD51B-FNDC3B RAD51B chr14 68888338 FNDC3B chr3 172041657 Exonic hg19 NA AW139957 Out-of-frame Inter-chr q24.1 q26.31 122339 ChimerSeq ChiTaRs ChiTaRs SPG11-ITGA9 SPG11 chr15 44876412 ITGA9 chr3 37756293 Exonic hg19 NA BF842317 Out-of-frame Inter-chr q21.1 p22.2 Oncogene 122340 ChimerSeq ChiTaRs ChiTaRs GSS-OASL GSS chr20 33516533 OASL chr12 121458567 Exonic hg19 NA AW848757 Out-of-frame Inter-chr q11.22 q24.31 122341 ChimerSeq ChiTaRs ChiTaRs THOC1-THOC1 THOC1 chr18 214783 THOC1 chr18 216599 Exonic hg19 NA BF088997 Out-of-frame Intra-chr p11.32 p11.32 122342 ChimerSeq ChiTaRs ChiTaRs TCF12-TCF12 TCF12 chr15 57514149 TCF12 chr15 57514089 Exonic hg19 NA DA572187 Out-of-frame Intra-chr q21.3 Oncogene Transcription factor q21.3 Oncogene Transcription factor 122343 ChimerSeq ChiTaRs ChiTaRs TTLL13-TTLL13 TTLL13 chr15 90814938 TTLL13 chr15 90814645 Exonic hg19 NA AA603397 Out-of-frame Intra-chr 122344 ChimerSeq ChiTaRs ChiTaRs TSPAN16-TSPAN16 TSPAN16 chr19 11435280 TSPAN16 chr19 11434546 Exonic hg19 NA BG982427 Out-of-frame Intra-chr p13.2 p13.2 122345 ChimerSeq ChiTaRs ChiTaRs SMOX-SMOX SMOX chr20 4167994 SMOX chr20 4163469 Exonic hg19 NA BF769727 Out-of-frame Intra-chr p13 p13 122346 ChimerSeq ChiTaRs ChiTaRs SORL1-SORL1 SORL1 chr11 121503901 SORL1 chr11 121502981 Exonic hg19 NA BE091247 Out-of-frame Intra-chr q24.1 q24.1 122347 ChimerSeq ChiTaRs ChiTaRs DENR-CMBL DENR chr12 123254614 CMBL chr5 10279956 Exonic hg19 NA BE813357 Out-of-frame Inter-chr q24.31 p15.2 122348 ChimerSeq ChiTaRs ChiTaRs PDK2-PDK2 PDK2 chr17 48186053 PDK2 chr17 48185696 Exonic hg19 NA R76327 Out-of-frame Intra-chr q21.33 q21.33 122349 ChimerSeq ChiTaRs ChiTaRs PSMC4-PSMC4 PSMC4 chr19 40487353 PSMC4 chr19 40486343 Exonic hg19 NA BU674697 3'UTR-CDS Intra-chr 122350 ChimerSeq ChiTaRs ChiTaRs SLC38A7-GOT2 SLC38A7 chr16 58718674 GOT2 chr16 58752140 Exonic hg19 NA DA873777 5'UTR-CDS Intra-chr q21 q21 122351 ChimerSeq ChiTaRs ChiTaRs FURIN-FURIN FURIN chr15 91420429 FURIN chr15 91419119 Exonic hg19 NA BG004887 Out-of-frame Intra-chr q26.1 q26.1 122352 ChimerSeq ChiTaRs ChiTaRs TMCO3-MPDU1 TMCO3 chr13 114193802 MPDU1 chr17 7490871 Exonic hg19 NA BF746417 Out-of-frame Inter-chr q34 p13.1 122353 ChimerSeq ChiTaRs ChiTaRs MARK2-MARK2 MARK2 chr11 63635989 MARK2 chr11 63636187 Exonic hg19 NA BE090027 Out-of-frame Intra-chr q13.1 CAMK:CAMKL q13.1 CAMK:CAMKL 122354 ChimerSeq ChiTaRs ChiTaRs VAT1-VAT1 VAT1 chr17 41166925 VAT1 chr17 41167655 Exonic hg19 NA BG003837 Out-of-frame Intra-chr q21.31 q21.31 122355 ChimerSeq ChiTaRs ChiTaRs PTBP1-MALAT1 PTBP1 chr19 811297 MALAT1 chr11 65267836 Exonic hg19 NA AW628767 Out-of-frame Inter-chr p13.3 q13.1 122356 ChimerSeq ChiTaRs ChiTaRs SLC25A3-SLC25A3 SLC25A3 chr12 98993808 SLC25A3 chr12 98995203 Exonic hg19 NA CF126627 Out-of-frame Intra-chr q23.1 q23.1 122357 ChimerSeq ChiTaRs ChiTaRs SMAD3-SMAD3 SMAD3 chr15 67483047 SMAD3 chr15 67483070 Exonic hg19 NA BF333017 Out-of-frame Intra-chr q22.33 Transcription factor q22.33 Transcription factor 122358 ChimerSeq ChiTaRs ChiTaRs RUNX1-C20orf112 RUNX1 chr21 36252935 C20orf112 chr20 31099207 Exonic hg19 NA GU070942 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor 122359 ChimerSeq ChiTaRs ChiTaRs TP53BP1-TP53BP1 TP53BP1 chr15 43748293 TP53BP1 chr15 43749284 Exonic hg19 NA BF357747 Out-of-frame Intra-chr q15.3 Tumor suppressor gene q15.3 Tumor suppressor gene 122360 ChimerSeq ChiTaRs ChiTaRs ELL3-ARR3 ELL3 chr15 44091671 ARR3 chrX 69498087 Exonic hg19 NA BQ637477 Out-of-frame Inter-chr q15.3 q13.1 122361 ChimerSeq ChiTaRs ChiTaRs KIAA0195-PLEK2 KIAA0195 chr17 73493233 PLEK2 chr14 67873959 Exonic hg19 NA DR761217 Out-of-frame Inter-chr q24.1 122362 ChimerSeq ChiTaRs ChiTaRs TM6SF1-NFIC TM6SF1 chr15 83805415 NFIC chr19 3456547 Exonic hg19 NA AW204067 In-Frame Inter-chr q25.2 p13.3 Transcription factor 122363 ChimerSeq ChiTaRs ChiTaRs PRNP-PRNP PRNP chr20 4679887 PRNP chr20 4679879 Exonic hg19 NA M13667 Out-of-frame Intra-chr p13 p13 122364 ChimerSeq ChiTaRs ChiTaRs SMURF2-SMURF2 SMURF2 chr17 62608731 SMURF2 chr17 62616608 Exonic hg19 NA AW859727 Out-of-frame Intra-chr q24.1 q24.1 122365 ChimerSeq ChiTaRs ChiTaRs NME1-LRP5 NME1 chr17 49239353 LRP5 chr11 68183863 Exonic hg19 NA BF762367 Out-of-frame Inter-chr q21.33 Tumor suppressor gene q13.2 122366 ChimerSeq ChiTaRs ChiTaRs CHMP2A-SH3PXD2A CHMP2A chr19 59063444 SH3PXD2A chr10 105573938 Exonic hg19 NA BF815097 Out-of-frame Inter-chr q13.43 q24.33 122367 ChimerSeq ChiTaRs ChiTaRs NFE2L1-NFE2L1 NFE2L1 chr17 46138318 NFE2L1 chr17 46137254 Exonic hg19 NA AA633217 Out-of-frame Intra-chr q21.32 Transcription factor q21.32 Transcription factor 122368 ChimerSeq ChiTaRs ChiTaRs MYO1D-SCAF8 MYO1D chr17 30819797 SCAF8 chr6 155154950 Exonic hg19 NA D56497 Out-of-frame Inter-chr q11.2 q25.2 122369 ChimerSeq ChiTaRs ChiTaRs MRPL42-ELL3 MRPL42 chr12 93896276 ELL3 chr15 44084547 Exonic hg19 NA CB133847 Out-of-frame Inter-chr q22 q15.3 122370 ChimerSeq ChiTaRs ChiTaRs OAZ2-OAZ2 OAZ2 chr15 64980923 OAZ2 chr15 64980482 Exonic hg19 NA W26817 Out-of-frame Intra-chr q22.31 q22.31 122371 ChimerSeq ChiTaRs ChiTaRs MGST1-CRYZ MGST1 chr12 16517339 CRYZ chr1 75172662 Exonic hg19 NA AI910757 Out-of-frame Inter-chr p12.3 p31.1 122372 ChimerSeq ChiTaRs ChiTaRs PRR14L-USP11 PRR14L chr22 32078996 USP11 chrX 47104299 Exonic hg19 NA T07607 Out-of-frame Inter-chr q12.2 p11.3 122373 ChimerSeq ChiTaRs ChiTaRs DYRK2-DYRK2 DYRK2 chr12 68055246 DYRK2 chr12 68055034 Exonic hg19 NA D81627 Out-of-frame Intra-chr q15 CMGC:DYRK q15 CMGC:DYRK 122374 ChimerSeq ChiTaRs ChiTaRs SMARCC2-SELENBP1 SMARCC2 chr12 56565167 SELENBP1 chr1 151336946 Exonic hg19 NA AW603757 Out-of-frame Inter-chr q13.2 q21.3 Tumor suppressor gene 122375 ChimerSeq ChiTaRs ChiTaRs TRBV20-1-TRBV20-1 TRBV20-1 chr16 2139563 TRBV20-1 chr16 2139020 Exonic hg19 NA BM706977 Out-of-frame Intra-chr 122376 ChimerSeq ChiTaRs ChiTaRs XBP1-XBP1 XBP1 chr22 29190747 XBP1 chr22 29190553 Exonic hg19 NA AA879027 Out-of-frame Intra-chr q12.1 Transcription factor q12.1 Transcription factor 122377 ChimerSeq ChiTaRs ChiTaRs NR2F6-NR2F6 NR2F6 chr19 17342839 NR2F6 chr19 17342869 Exonic hg19 NA CA450537 Out-of-frame Intra-chr p13.11 Transcription factor p13.11 Transcription factor 122378 ChimerSeq ChiTaRs ChiTaRs ATP6V1E1-ATP6V1E1 ATP6V1E1 chr22 18092848 ATP6V1E1 chr22 18090368 Exonic hg19 NA BE144497 Out-of-frame Intra-chr q11.21 q11.21 122379 ChimerSeq ChiTaRs ChiTaRs ZNFX1-AS1-RPS16 ZNFX1-AS1 chr20 47905797 RPS16 chr19 39924312 Exonic hg19 NA BC070487 Out-of-frame Inter-chr q13.2 Tumor suppressor gene 122380 ChimerSeq ChiTaRs ChiTaRs ZNF302-ZNF302 ZNF302 chr19 35176791 ZNF302 chr19 35176783 Exonic hg19 NA AA639067 Out-of-frame Intra-chr q13.11 Transcription factor q13.11 Transcription factor 122381 ChimerSeq ChiTaRs ChiTaRs KCNK6-KCNK6 KCNK6 chr19 38819090 KCNK6 chr19 38818200 Exonic hg19 NA BE828357 Out-of-frame Intra-chr q13.2 q13.2 122382 ChimerSeq ChiTaRs ChiTaRs OAZ1-TXNL1 OAZ1 chr19 2273240 TXNL1 chr18 54270053 Exonic hg19 NA BC025017 Out-of-frame Inter-chr p13.3 q21.31 122383 ChimerSeq ChiTaRs ChiTaRs CSDA-PSMB1 CSDA chr12 10862592 PSMB1 chr6 170844386 Exonic hg19 NA BE122757 Out-of-frame Inter-chr 122384 ChimerSeq ChiTaRs ChiTaRs AHCY-SRRM2 AHCY chr20 32891163 SRRM2 chr16 2818917 Exonic hg19 NA DA207667 Out-of-frame Inter-chr q11.22 p13.3 122385 ChimerSeq ChiTaRs ChiTaRs CDK2AP1-CDK2AP1 CDK2AP1 chr12 123745766 CDK2AP1 chr12 123745735 Exonic hg19 NA AW972807 Out-of-frame Intra-chr q24.31 Tumor suppressor gene q24.31 Tumor suppressor gene 122386 ChimerSeq ChiTaRs ChiTaRs SERPINA1-PSMD2 SERPINA1 chr14 94854926 PSMD2 chr3 184026505 Exonic hg19 NA AF075367 Out-of-frame Inter-chr q32.13 q27.1 122387 ChimerSeq ChiTaRs ChiTaRs CCND1-DPP6 CCND1 chr11 69466714 DPP6 chr7 153659694 Exonic hg19 NA AW997667 Out-of-frame Inter-chr q13.3 Oncogene 122388 ChimerSeq ChiTaRs ChiTaRs TXN2-TXN2 TXN2 chr22 36863554 TXN2 chr22 36863609 Exonic hg19 NA CA312207 Out-of-frame Intra-chr q12.3 q12.3 122389 ChimerSeq ChiTaRs ChiTaRs TSC22D1-BOLA2 TSC22D1 chr13 45008318 BOLA2 chr16 30079981 Exonic hg19 NA BI046797 Out-of-frame Inter-chr q14.11 Tumor suppressor gene Transcription factor p11.2 122390 ChimerSeq ChiTaRs ChiTaRs MLL-CEP170B MLL chr11 118353726 CEP170B chr14 105342773 Exonic hg19 NA AM422013 Out-of-frame Inter-chr q23.3 q32.33 122391 ChimerSeq ChiTaRs ChiTaRs EXOC5-EXOC5 EXOC5 chr14 57673431 EXOC5 chr14 57673436 Exonic hg19 NA AA728867 Out-of-frame Intra-chr q22.3 q22.3 122392 ChimerSeq ChiTaRs ChiTaRs SRGAP1-LEFTY2 SRGAP1 chr12 64393594 LEFTY2 chr1 226124304 Exonic hg19 NA AK094077 Out-of-frame Inter-chr q14.2 q42.12 Tumor suppressor gene 122393 ChimerSeq ChiTaRs ChiTaRs NEAT1-PPP6R2 NEAT1 chr11 65191711 PPP6R2 chr22 50862004 Exonic hg19 NA BE929947 Out-of-frame Inter-chr q13.1 q13.33 122394 ChimerSeq ChiTaRs ChiTaRs VPS29-VPS29 VPS29 chr12 110929497 VPS29 chr12 110929703 Exonic hg19 NA CB243627 Out-of-frame Intra-chr q24.11 q24.11 122395 ChimerSeq ChiTaRs ChiTaRs DSG2-FAF2 DSG2 chr18 29111057 FAF2 chr5 175936412 Exonic hg19 NA AW374097 Out-of-frame Inter-chr q12.1 q35.2 122396 ChimerSeq ChiTaRs ChiTaRs PHLDB1-ITGA9 PHLDB1 chr11 118480244 ITGA9 chr3 37634981 Exonic hg19 NA BF748867 Out-of-frame Inter-chr q23.3 p22.2 Oncogene 122397 ChimerSeq ChiTaRs ChiTaRs SUGP2-ITPR2 SUGP2 chr19 19141892 ITPR2 chr12 26536695 Exonic hg19 NA AL832587 Out-of-frame Inter-chr p13.11 p11.23 122398 ChimerSeq ChiTaRs ChiTaRs TMEM97-MFN2 TMEM97 chr17 26653706 MFN2 chr1 12065901 Exonic hg19 NA BE280687 Out-of-frame Inter-chr q11.2 p36.22 122399 ChimerSeq ChiTaRs ChiTaRs CNDP2-FRYL CNDP2 chr18 72176440 FRYL chr4 48741147 Exonic hg19 NA BI010777 Out-of-frame Inter-chr q22.3 Tumor suppressor gene p11 122400 ChimerSeq ChiTaRs ChiTaRs LOC100507246-MYO10 LOC100507246 chr17 74556825 MYO10 chr5 16911584 Exonic hg19 NA BX112367 Out-of-frame Inter-chr p15.1 122401 ChimerSeq ChiTaRs ChiTaRs RBM26-TMBIM6 RBM26 chr13 79922571 TMBIM6 chr12 50146799 Exonic hg19 NA AI133497 Out-of-frame Inter-chr q31.1 q13.12 122402 ChimerSeq ChiTaRs ChiTaRs DAPK2-MAP2K5 DAPK2 chr15 64338528 MAP2K5 chr15 68098982 Exonic hg19 NA AW013877 Out-of-frame Intra-chr q22.31 CAMK:DAPK Tumor suppressor gene q23 STE:STE7 122403 ChimerSeq ChiTaRs ChiTaRs RBM25-RBM25 RBM25 chr14 73555929 RBM25 chr14 73563313 Exonic hg19 NA BF063717 Out-of-frame Intra-chr q24.2 q24.2 122404 ChimerSeq ChiTaRs ChiTaRs RAB11FIP3-RAB11FIP3 RAB11FIP3 chr16 570756 RAB11FIP3 chr16 569565 Exonic hg19 NA BM908747 Out-of-frame Intra-chr 122405 ChimerSeq ChiTaRs ChiTaRs LINS-LINS LINS chr15 101111343 LINS chr15 101110364 Exonic hg19 NA DR000687 Out-of-frame Intra-chr 122406 ChimerSeq ChiTaRs ChiTaRs MBD2-MACF1 MBD2 chr18 51715310 MACF1 chr1 39926745 Exonic hg19 NA BQ359497 Out-of-frame Inter-chr q21.2 Transcription factor p34.3 122407 ChimerSeq ChiTaRs ChiTaRs ZNF43-CKAP5 ZNF43 chr19 22034852 CKAP5 chr11 46776471 Exonic hg19 NA BQ432517 Out-of-frame Inter-chr p12 Transcription factor p11.2 122408 ChimerSeq ChiTaRs ChiTaRs RHPN2-ACTG1 RHPN2 chr19 33469944 ACTG1 chr17 79477603 Exonic hg19 NA BU595517 Out-of-frame Inter-chr q13.11 q25.3 122409 ChimerSeq ChiTaRs ChiTaRs ARIH1-ARIH1 ARIH1 chr15 72878154 ARIH1 chr15 72878137 Exonic hg19 NA BM462307 Out-of-frame Intra-chr q24.1 q24.1 122410 ChimerSeq ChiTaRs ChiTaRs KIAA1731-MEG3 KIAA1731 chr11 93455031 MEG3 chr14 101296149 Exonic hg19 NA AA705497 Out-of-frame Inter-chr q32.2 Tumor suppressor gene 122411 ChimerSeq ChiTaRs ChiTaRs PDE3A-RNF34 PDE3A chr12 20749041 RNF34 chr12 121838985 Exonic hg19 NA BF755147 Out-of-frame Intra-chr p12.2 q24.31 122412 ChimerSeq ChiTaRs ChiTaRs SRSF9-GATC SRSF9 chr12 120907481 GATC chr12 120899968 Exonic hg19 NA BG750277 Out-of-frame Intra-chr q24.31 q24.31 122413 ChimerSeq ChiTaRs ChiTaRs VSTM2L-ZBTB5 VSTM2L chr20 36573137 ZBTB5 chr9 37439665 Exonic hg19 NA T05387 Out-of-frame Inter-chr q11.23 p13.2 Transcription factor 122414 ChimerSeq ChiTaRs ChiTaRs PVRL1-FARP1 PVRL1 chr11 119532302 FARP1 chr13 98968550 Exonic hg19 NA R50637 Out-of-frame Inter-chr q32.2 122415 ChimerSeq ChiTaRs ChiTaRs SYN3-SYN3 SYN3 chr22 33199531 SYN3 chr22 33198339 Exonic hg19 NA DW447487 Out-of-frame Intra-chr q12.3 q12.3 122416 ChimerSeq ChiTaRs ChiTaRs ATP5B-ATP5B ATP5B chr12 57037370 ATP5B chr12 57031959 Exonic hg19 NA BG258137 Out-of-frame Intra-chr q13.3 q13.3 122417 ChimerSeq ChiTaRs ChiTaRs PDE9A-NR4A1 PDE9A chr21 44110439 NR4A1 chr12 52446067 Exonic hg19 NA BI045347 Out-of-frame Inter-chr q22.3 q13.13 Tumor suppressor gene Transcription factor 122418 ChimerSeq ChiTaRs ChiTaRs SLC25A39-HOXC6 SLC25A39 chr17 42397593 HOXC6 chr12 54410692 Exonic hg19 NA BF034547 Out-of-frame Inter-chr q21.31 q13.13 Transcription factor 122419 ChimerSeq ChiTaRs ChiTaRs PLCB3-DGCR14 PLCB3 chr11 64035394 DGCR14 chr22 19126746 Exonic hg19 NA AI968387 Out-of-frame Inter-chr q13.1 Tumor suppressor gene q11.21 122420 ChimerSeq ChiTaRs ChiTaRs ATP2A2-AAAS ATP2A2 chr12 110784104 AAAS chr12 53702079 Exonic hg19 NA BQ327397 Out-of-frame Intra-chr q24.11 q13.13 122421 ChimerSeq ChiTaRs ChiTaRs RUNX1-NLRP4 RUNX1 chr21 36259409 NLRP4 chr19 56392628 Exonic hg19 NA AF312387 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q13.43 122422 ChimerSeq ChiTaRs ChiTaRs CORO6-CORO6 CORO6 chr17 27942846 CORO6 chr17 27942744 Exonic hg19 NA CF454387 Out-of-frame Intra-chr q11.2 q11.2 122423 ChimerSeq ChiTaRs ChiTaRs CLEC2B-ADARB1 CLEC2B chr12 10010153 ADARB1 chr21 46644489 Exonic hg19 NA BQ420467 Out-of-frame Inter-chr p13.31 q22.3 Tumor suppressor gene 122424 ChimerSeq ChiTaRs ChiTaRs CDC16-CDC16 CDC16 chr13 115008804 CDC16 chr13 115008775 Exonic hg19 NA BI761697 Out-of-frame Intra-chr q34 q34 122425 ChimerSeq ChiTaRs ChiTaRs RPL27-RASIP1 RPL27 chr17 41154769 RASIP1 chr19 49228152 Exonic hg19 NA CV327307 Out-of-frame Inter-chr q21.31 q13.33 122426 ChimerSeq ChiTaRs ChiTaRs SCN4B-COL6A1 SCN4B chr11 118013971 COL6A1 chr21 47424327 Exonic hg19 NA BF882327 Out-of-frame Inter-chr q23.3 q22.3 122427 ChimerSeq ChiTaRs ChiTaRs MEF2A-MEF2A MEF2A chr15 100256687 MEF2A chr15 100256358 Exonic hg19 NA CA944617 Out-of-frame Intra-chr q26.3 Transcription factor q26.3 Transcription factor 122428 ChimerSeq ChiTaRs ChiTaRs TBC1D2B-PFKFB3 TBC1D2B chr15 78340098 PFKFB3 chr10 6224094 Exonic hg19 NA BF359367 Out-of-frame Inter-chr q25.1 p15.1 122429 ChimerSeq ChiTaRs ChiTaRs NPIPB7-NPIPB7 NPIPB7 chr16 28835242 NPIPB7 chr16 28836685 Exonic hg19 NA BX956077 Out-of-frame Intra-chr p12.1 p12.1 122430 ChimerSeq ChiTaRs ChiTaRs AKAP3-AKAP3 AKAP3 chr12 4724791 AKAP3 chr12 4724784 Exonic hg19 NA AW512277 Out-of-frame Intra-chr p13.32 p13.32 122431 ChimerSeq ChiTaRs ChiTaRs ITGA3-PPP1R3F ITGA3 chr17 48148953 PPP1R3F chrX 49131383 Exonic hg19 NA BF359837 Out-of-frame Inter-chr q21.33 p11.23 122432 ChimerSeq ChiTaRs ChiTaRs MYO9B-ADAM12 MYO9B chr19 17295796 ADAM12 chr10 127990197 Exonic hg19 NA BF997417 Out-of-frame Inter-chr p13.11 q26.2 122433 ChimerSeq ChiTaRs ChiTaRs RAB5B-RAB5B RAB5B chr12 56387619 RAB5B chr12 56387644 Exonic hg19 NA AW886457 Out-of-frame Intra-chr q13.2 q13.2 122434 ChimerSeq ChiTaRs ChiTaRs MYO5C-RBM33 MYO5C chr15 52540363 RBM33 chr7 155461668 Exonic hg19 NA BF834267 Out-of-frame Inter-chr q21.2 q36.3 122435 ChimerSeq ChiTaRs ChiTaRs CBL-CBL CBL chr11 119177598 CBL chr11 119177193 Exonic hg19 NA AW500077 Out-of-frame Intra-chr q23.3 Oncogene Tumor suppressor gene q23.3 Oncogene Tumor suppressor gene 122436 ChimerSeq ChiTaRs ChiTaRs PPP2R1A-PPP2R1A PPP2R1A chr19 52724323 PPP2R1A chr19 52716038 Exonic hg19 NA CN418097 Out-of-frame Intra-chr q13.41 Oncogene q13.41 Oncogene 122437 ChimerSeq ChiTaRs ChiTaRs CRYL1-NDRG2 CRYL1 chr13 21054160 NDRG2 chr14 21485276 Exonic hg19 NA BF926027 Out-of-frame Inter-chr q12.11 q11.2 Tumor suppressor gene 122438 ChimerSeq ChiTaRs ChiTaRs FBXO7-FBXO7 FBXO7 chr22 32894743 FBXO7 chr22 32894252 Exonic hg19 NA AI272377 Out-of-frame Intra-chr q12.3 q12.3 122439 ChimerSeq ChiTaRs ChiTaRs CPD-CPD CPD chr17 28706590 CPD chr17 28705984 Exonic hg19 NA DR003197 Out-of-frame Intra-chr q11.2 Tumor suppressor gene q11.2 Tumor suppressor gene 122440 ChimerSeq ChiTaRs ChiTaRs GATAD2A-PRDM2 GATAD2A chr19 19617422 PRDM2 chr1 14100959 Exonic hg19 NA BP381437 Out-of-frame Inter-chr p13.11 Transcription factor p36.21 Tumor suppressor gene Transcription factor 122441 ChimerSeq ChiTaRs ChiTaRs RSL1D1-RSL1D1 RSL1D1 chr16 11931481 RSL1D1 chr16 11933578 Exonic hg19 NA AV748507 Out-of-frame Intra-chr p13.13 p13.13 122442 ChimerSeq ChiTaRs ChiTaRs GNG7-LINC00535 GNG7 chr19 2625652 LINC00535 chr8 94405553 Exonic hg19 NA DQ376079 Out-of-frame Inter-chr p13.3 q22.1 122443 ChimerSeq ChiTaRs ChiTaRs ERBB3-MICAL3 ERBB3 chr12 56494937 MICAL3 chr22 18473830 Exonic hg19 NA BG983587 Out-of-frame Inter-chr q13.2 Oncogene q11.21 122444 ChimerSeq ChiTaRs ChiTaRs MYPOP-C20orf112 MYPOP chr19 46404746 C20orf112 chr20 31033303 Exonic hg19 NA BM914357 Out-of-frame Inter-chr q13.32 Transcription factor 122445 ChimerSeq ChiTaRs ChiTaRs TOM1L2-RBM26 TOM1L2 chr17 17852952 RBM26 chr13 79932807 Exonic hg19 NA BF920827 Out-of-frame Inter-chr p11.2 Tumor suppressor gene q31.1 122446 ChimerSeq ChiTaRs ChiTaRs CBL-SLC25A1 CBL chr11 119177480 SLC25A1 chr22 19163094 Exonic hg19 NA BC016877 Out-of-frame Inter-chr q23.3 Oncogene Tumor suppressor gene q11.21 122447 ChimerSeq ChiTaRs ChiTaRs SFSWAP-CYP11A1 SFSWAP chr12 132216428 CYP11A1 chr15 74630957 Exonic hg19 NA BG011367 Out-of-frame Inter-chr q24.33 q24.1 122448 ChimerSeq ChiTaRs ChiTaRs SMAD7-SUMF1 SMAD7 chr18 46448175 SUMF1 chr3 3841494 Exonic hg19 NA BE831647 Out-of-frame Inter-chr q21.1 p26.1 122449 ChimerSeq ChiTaRs ChiTaRs USP12-POLR2A USP12 chr13 27666087 POLR2A chr17 7416128 Exonic hg19 NA BE833427 Out-of-frame Inter-chr q12.13 Tumor suppressor gene p13.1 122450 ChimerSeq ChiTaRs ChiTaRs PAK4-PAK4 PAK4 chr19 39623169 PAK4 chr19 39622757 Exonic hg19 NA BE066277 Out-of-frame Intra-chr q13.2 STE:STE20 q13.2 STE:STE20 122451 ChimerSeq ChiTaRs ChiTaRs MYO18A-EIF4G1 MYO18A chr17 27435960 EIF4G1 chr3 184043146 Exonic hg19 NA DA536097 Out-of-frame Inter-chr q11.2 Oncogene q27.1 122452 ChimerSeq ChiTaRs ChiTaRs GPC6-GPC6 GPC6 chr13 94255143 GPC6 chr13 94250660 Exonic hg19 NA BF669457 Out-of-frame Intra-chr q31.3 q31.3 122453 ChimerSeq ChiTaRs ChiTaRs NLRC3-NLRC3 NLRC3 chr16 3589108 NLRC3 chr16 3589310 Exonic hg19 NA AW504437 Out-of-frame Intra-chr p13.3 p13.3 122454 ChimerSeq ChiTaRs ChiTaRs KIAA0895L-VAV2 KIAA0895L chr16 67210402 VAV2 chr9 136802303 Exonic hg19 NA BF828927 Out-of-frame Inter-chr q22.1 q34.2 122455 ChimerSeq ChiTaRs ChiTaRs TBC1D16-ATP1B1 TBC1D16 chr17 77977104 ATP1B1 chr1 169077152 Exonic hg19 NA AI902427 Out-of-frame Inter-chr q25.3 q24.2 122456 ChimerSeq ChiTaRs ChiTaRs NTN4-KTN1 NTN4 chr12 96126656 KTN1 chr14 56137331 Exonic hg19 NA BE147087 Out-of-frame Inter-chr q22 q22.3 122457 ChimerSeq ChiTaRs ChiTaRs TPD52L2-XRCC4 TPD52L2 chr20 62522725 XRCC4 chr5 82648950 Exonic hg19 NA BG282107 Out-of-frame Inter-chr q13.33 q14.2 122458 ChimerSeq ChiTaRs ChiTaRs MBNL2-PLP1 MBNL2 chr13 97882117 PLP1 chrX 103031802 Exonic hg19 NA DB171847 Out-of-frame Inter-chr q32.1 Transcription factor q22.2 122459 ChimerSeq ChiTaRs ChiTaRs BRD1-BRD1 BRD1 chr22 50170791 BRD1 chr22 50167949 Exonic hg19 NA AA116017 Out-of-frame Intra-chr q13.33 q13.33 122460 ChimerSeq ChiTaRs ChiTaRs CREBZF-CREBZF CREBZF chr11 85375578 CREBZF chr11 85370509 Exonic hg19 NA BF001447 Out-of-frame Intra-chr q14.1 Transcription factor q14.1 Transcription factor 122461 ChimerSeq ChiTaRs ChiTaRs MARK2-ALDOC MARK2 chr11 63677048 ALDOC chr17 26900284 Exonic hg19 NA AI308067 Out-of-frame Inter-chr q13.1 CAMK:CAMKL q11.2 122462 ChimerSeq ChiTaRs ChiTaRs ARHGAP32-EPB41L2 ARHGAP32 chr11 128835708 EPB41L2 chr6 131181944 Exonic hg19 NA DA235187 Out-of-frame Inter-chr q24.3 q23.2 122463 ChimerSeq ChiTaRs ChiTaRs BID-COPG1 BID chr22 18218282 COPG1 chr3 128990609 Exonic hg19 NA AA627417 3'UTR-CDS Inter-chr q11.21 q21.3 122464 ChimerSeq ChiTaRs ChiTaRs MBP-MBP MBP chr18 74729042 MBP chr18 74696752 Exonic hg19 NA BP195537 Out-of-frame Intra-chr q23 q23 122465 ChimerSeq ChiTaRs ChiTaRs RPRD1A-RPRD1A RPRD1A chr18 33571811 RPRD1A chr18 33571042 Exonic hg19 NA BM552687 Out-of-frame Intra-chr q12.2 q12.2 122466 ChimerSeq ChiTaRs ChiTaRs SCG5-HBA2 SCG5 chr15 32983964 HBA2 chr16 223512 Exonic hg19 NA BP386507 In-Frame Inter-chr p13.3 122467 ChimerSeq ChiTaRs ChiTaRs SYT1-CDH10 SYT1 chr12 79274423 CDH10 chr5 24487210 Exonic hg19 NA AF039747 Out-of-frame Inter-chr q21.2 p14.1 122468 ChimerSeq ChiTaRs ChiTaRs SCFD1-MLLT3 SCFD1 chr14 31091786 MLLT3 chr9 20549656 Exonic hg19 NA BG217177 Out-of-frame Inter-chr q12 p21.3 122469 ChimerSeq ChiTaRs ChiTaRs KDM2A-SLC6A19 KDM2A chr11 66964631 SLC6A19 chr5 1202933 Exonic hg19 NA BF379627 Out-of-frame Inter-chr q13.2 Transcription factor p15.33 122470 ChimerSeq ChiTaRs ChiTaRs ANKRD11-RNF11 ANKRD11 chr16 89527598 RNF11 chr1 51738294 Exonic hg19 NA D44707 Out-of-frame Inter-chr q24.3 p32.3 122471 ChimerSeq ChiTaRs ChiTaRs PHLDA1-PHLDA1 PHLDA1 chr12 76424701 PHLDA1 chr12 76424031 Exonic hg19 NA BF001807 Out-of-frame Intra-chr q21.2 q21.2 122472 ChimerSeq ChiTaRs ChiTaRs PIGW-POMGNT1 PIGW chr17 34895132 POMGNT1 chr1 46656022 Exonic hg19 NA AW272407 Out-of-frame Inter-chr q12 p34.1 122473 ChimerSeq ChiTaRs ChiTaRs DHODH-PKN1 DHODH chr16 72051051 PKN1 chr19 14574713 Exonic hg19 NA BF837427 Out-of-frame Inter-chr q22.2 p13.12 AGC:PKN 122474 ChimerSeq ChiTaRs ChiTaRs TAGLN-TAGLN TAGLN chr11 117075307 TAGLN chr11 117074497 Exonic hg19 NA AA658907 3'UTR-CDS Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene 122475 ChimerSeq ChiTaRs ChiTaRs KRT5-CDK11B KRT5 chr12 52911940 CDK11B chr1 1650812 Exonic hg19 NA BF917097 Out-of-frame Inter-chr q13.13 p36.33 122476 ChimerSeq ChiTaRs ChiTaRs SS18-RINT1 SS18 chr18 23646961 RINT1 chr7 105207864 Exonic hg19 NA BF907597 Out-of-frame Inter-chr q11.2 q22.3 Tumor suppressor gene 122477 ChimerSeq ChiTaRs ChiTaRs NPEPL1-RBM15B NPEPL1 chr20 57290264 RBM15B chr3 51430456 Exonic hg19 NA BF869437 Out-of-frame Inter-chr q13.32 p21.2 122478 ChimerSeq ChiTaRs ChiTaRs PAQR4-PAQR4 PAQR4 chr16 3022464 PAQR4 chr16 3022438 Exonic hg19 NA BM792467 Out-of-frame Intra-chr p13.3 p13.3 122479 ChimerSeq ChiTaRs ChiTaRs ARHGAP9-AVIL ARHGAP9 chr12 57894305 AVIL chr12 58199921 Exonic hg19 NA BC004197 Out-of-frame Intra-chr q13.3 q14.1 122480 ChimerSeq ChiTaRs ChiTaRs SYNRG-SYNRG SYNRG chr17 35876225 SYNRG chr17 35876939 Exonic hg19 NA BF727217 Out-of-frame Intra-chr 122481 ChimerSeq ChiTaRs ChiTaRs ACTG1-ACTG1 ACTG1 chr17 79477524 ACTG1 chr17 79476997 Exonic hg19 NA BQ431217 Out-of-frame Intra-chr q25.3 q25.3 122482 ChimerSeq ChiTaRs ChiTaRs APRT-APRT APRT chr16 88876939 APRT chr16 88875882 Exonic hg19 NA BG475137 Out-of-frame Intra-chr q24.3 q24.3 122483 ChimerSeq ChiTaRs ChiTaRs LRFN5-CERS6 LRFN5 chr14 42361085 CERS6 chr2 169587955 Exonic hg19 NA M86087 Out-of-frame Inter-chr q21.1 q24.3 122484 ChimerSeq ChiTaRs ChiTaRs SPIRE1-CYP27C1 SPIRE1 chr18 12454446 CYP27C1 chr2 127944765 Exonic hg19 NA BF833367 Out-of-frame Inter-chr p11.21 q14.3 122485 ChimerSeq ChiTaRs ChiTaRs PPARA-PPARA PPARA chr22 46559225 PPARA chr22 46553064 Exonic hg19 NA BF911067 Out-of-frame Intra-chr q13.31 Tumor suppressor gene Transcription factor q13.31 Tumor suppressor gene Transcription factor 122486 ChimerSeq ChiTaRs ChiTaRs ATP1B2-ALDH3A2 ATP1B2 chr17 7560404 ALDH3A2 chr17 19552135 Exonic hg19 NA AI769187 Out-of-frame Intra-chr p13.1 p11.2 122487 ChimerSeq ChiTaRs ChiTaRs FAM96A-MRPL52 FAM96A chr15 64366473 MRPL52 chr14 23299118 Exonic hg19 NA CK826457 Out-of-frame Inter-chr q22.31 q11.2 122488 ChimerSeq ChiTaRs ChiTaRs CREBBP-KAT6A CREBBP chr16 3926360 KAT6A chr8 41793629 Exonic hg19 NA AJ315157 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene p11.21 Oncogene KB Pub 122489 ChimerSeq ChiTaRs ChiTaRs FAM57A-FAM57A FAM57A chr17 645071 FAM57A chr17 645043 Exonic hg19 NA BG111497 Out-of-frame Intra-chr p13.3 p13.3 122490 ChimerSeq ChiTaRs ChiTaRs TGFB3-TGFB3 TGFB3 chr14 76437578 TGFB3 chr14 76424783 Exonic hg19 NA AA579057 Out-of-frame Intra-chr q24.3 q24.3 122491 ChimerSeq ChiTaRs ChiTaRs DRG1-DEPDC5 DRG1 chr22 31830172 DEPDC5 chr22 32270371 Exonic hg19 NA BM150997 3'UTR-3'UTR Intra-chr q12.2 Tumor suppressor gene q12.2 122492 ChimerSeq ChiTaRs ChiTaRs POLDIP3-ITPR2 POLDIP3 chr22 42981107 ITPR2 chr12 26633327 Exonic hg19 NA BI027067 Out-of-frame Inter-chr q13.2 p11.23 122493 ChimerSeq ChiTaRs ChiTaRs RIPK4-NEB RIPK4 chr21 43166181 NEB chr2 152468732 Exonic hg19 NA BE717807 Out-of-frame Inter-chr q22.3 q23.3 122494 ChimerSeq ChiTaRs ChiTaRs SLTM-SLTM SLTM chr15 59186379 SLTM chr15 59185176 Exonic hg19 NA AW996827 Out-of-frame Intra-chr q22.1 q22.1 122495 ChimerSeq ChiTaRs ChiTaRs SLCO4A1-SLCO4A1 SLCO4A1 chr20 61296384 SLCO4A1 chr20 61294422 Exonic hg19 NA BF800567 Out-of-frame Intra-chr q13.33 q13.33 122496 ChimerSeq ChiTaRs ChiTaRs ARRB2-ARRB2 ARRB2 chr17 4624792 ARRB2 chr17 4624410 Exonic hg19 NA AI469107 Out-of-frame Intra-chr p13.2 p13.2 122497 ChimerSeq ChiTaRs ChiTaRs A2ML1-SNX29 A2ML1 chr12 8995787 SNX29 chr16 12119888 Exonic hg19 NA BF832717 Out-of-frame Inter-chr p13.31 p13.13 122498 ChimerSeq ChiTaRs ChiTaRs RDH11-IPO7 RDH11 chr14 68162481 IPO7 chr11 9467536 Exonic hg19 NA BC017787 Out-of-frame Inter-chr q24.1 p15.4 122499 ChimerSeq ChiTaRs ChiTaRs CCND1-GMFB CCND1 chr11 69467559 GMFB chr14 54942147 Exonic hg19 NA BF747957 Out-of-frame Inter-chr q13.3 Oncogene q22.2 122500 ChimerSeq ChiTaRs ChiTaRs SCFD1-MLLT3 SCFD1 chr14 31091767 MLLT3 chr9 20549656 Exonic hg19 NA BG221177 Out-of-frame Inter-chr q12 p21.3 122501 ChimerSeq ChiTaRs ChiTaRs H3F3B-KCTD18 H3F3B chr17 73774597 KCTD18 chr2 201354607 Exonic hg19 NA BE771697 Out-of-frame Inter-chr q25.1 q33.1 122502 ChimerSeq ChiTaRs ChiTaRs NR2F2-MRTO4 NR2F2 chr15 96880999 MRTO4 chr1 19578335 Exonic hg19 NA AI214117 Out-of-frame Inter-chr q26.2 Transcription factor p36.13 122503 ChimerSeq ChiTaRs ChiTaRs ZBTB25-NME9 ZBTB25 chr14 64945485 NME9 chr3 138016452 Exonic hg19 NA AA452527 Out-of-frame Inter-chr q23.3 Transcription factor q22.3 122504 ChimerSeq ChiTaRs ChiTaRs ST14-ST14 ST14 chr11 130066533 ST14 chr11 130064080 Exonic hg19 NA AW965057 Out-of-frame Intra-chr q24.3 q24.3 122505 ChimerSeq ChiTaRs ChiTaRs CCDC102A-CCDC102A CCDC102A chr16 57546621 CCDC102A chr16 57546276 Exonic hg19 NA R58437 Out-of-frame Intra-chr q21 q21 122506 ChimerSeq ChiTaRs ChiTaRs ZNF232-DDX39B ZNF232 chr17 5009308 DDX39B chr6 2838906 Exonic hg19 NA AW393517 Out-of-frame Inter-chr p13.2 Transcription factor 122507 ChimerSeq ChiTaRs ChiTaRs TJP1-RNASE1 TJP1 chr15 30018605 RNASE1 chr14 21270057 Exonic hg19 NA BF847087 Out-of-frame Inter-chr q11.2 122508 ChimerSeq ChiTaRs ChiTaRs RUNX1-VAV1 RUNX1 chr21 36339565 VAV1 chr19 6772717 Exonic hg19 NA DA945077 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor p13.3 122509 ChimerSeq ChiTaRs ChiTaRs SOS2-PRPF40A SOS2 chr14 50655545 PRPF40A chr2 153569543 Exonic hg19 NA BE706447 Out-of-frame Inter-chr q21.3 q23.3 122510 ChimerSeq ChiTaRs ChiTaRs TBC1D20-FN1 TBC1D20 chr20 417499 FN1 chr2 216230830 Exonic hg19 NA BQ008587 Out-of-frame Inter-chr p13 q35 Oncogene 122511 ChimerSeq ChiTaRs ChiTaRs CECR2-ZCCHC7 CECR2 chr22 17939871 ZCCHC7 chr9 37270330 Exonic hg19 NA BI058947 Out-of-frame Inter-chr q11.1 p13.2 122512 ChimerSeq ChiTaRs ChiTaRs MNAT1-MNAT1 MNAT1 chr14 61228543 MNAT1 chr14 61228502 Exonic hg19 NA BY798327 Out-of-frame Intra-chr q23.1 q23.1 122513 ChimerSeq ChiTaRs ChiTaRs RNASEH2B-PNRC1 RNASEH2B chr13 51486351 PNRC1 chr6 89790706 Exonic hg19 NA BQ638167 Out-of-frame Inter-chr q14.3 q15 122514 ChimerSeq ChiTaRs ChiTaRs SPAG5-SPAG5 SPAG5 chr17 26925615 SPAG5 chr17 26919874 Exonic hg19 NA BE092077 Out-of-frame Intra-chr q11.2 q11.2 122515 ChimerSeq ChiTaRs ChiTaRs FAM98C-WDR33 FAM98C chr19 38899778 WDR33 chr2 128520491 Exonic hg19 NA AI655327 Out-of-frame Inter-chr q13.2 q14.3 122516 ChimerSeq ChiTaRs ChiTaRs SPAG5-SPAG5 SPAG5 chr17 26920088 SPAG5 chr17 26925560 Exonic hg19 NA BE091907 Out-of-frame Intra-chr q11.2 q11.2 122517 ChimerSeq ChiTaRs ChiTaRs DLEU1-DLEU1 DLEU1 chr13 50814707 DLEU1 chr13 50814851 Exonic hg19 NA AW301307 Out-of-frame Intra-chr q14.2 Tumor suppressor gene q14.2 Tumor suppressor gene 122518 ChimerSeq ChiTaRs ChiTaRs COMT-MAP7D1 COMT chr22 19956377 MAP7D1 chr1 36644863 Exonic hg19 NA BI053757 Out-of-frame Inter-chr q11.21 p34.3 122519 ChimerSeq ChiTaRs ChiTaRs COMT-PCBP2 COMT chr22 19957775 PCBP2 chr12 53849140 Exonic hg19 NA AI360037 Out-of-frame Inter-chr q11.21 q13.13 122520 ChimerSeq ChiTaRs ChiTaRs LEPREL2-INS-IGF2 LEPREL2 chr12 6949010 INS-IGF2 chr11 2151151 Exonic hg19 NA AW264457 Out-of-frame Inter-chr p15.5 122521 ChimerSeq ChiTaRs ChiTaRs TTLL5-AATF TTLL5 chr14 76204242 AATF chr17 35314642 Exonic hg19 NA AI904047 Out-of-frame Inter-chr q24.3 122522 ChimerSeq ChiTaRs ChiTaRs BID-SLC4A1AP BID chr22 18246590 SLC4A1AP chr2 27900646 Exonic hg19 NA BE222887 Out-of-frame Inter-chr q11.21 p23.3 122523 ChimerSeq ChiTaRs ChiTaRs TRA@-EFNB2 TRA@ chr14 22969421 EFNB2 chr13 107144427 Exonic hg19 NA BF893587 Out-of-frame Inter-chr q11.2 q33.3 122524 ChimerSeq ChiTaRs ChiTaRs HERC1-HERC1 HERC1 chr15 63958190 HERC1 chr15 63954016 Exonic hg19 NA BF997527 Out-of-frame Intra-chr q22.31 q22.31 122525 ChimerSeq ChiTaRs ChiTaRs SYNRG-ZNF876P SYNRG chr17 35877054 ZNF876P chr4 211789 Exonic hg19 NA AA521317 Out-of-frame Inter-chr p16.3 122526 ChimerSeq ChiTaRs ChiTaRs SCN8A-MALAT1 SCN8A chr12 52201590 MALAT1 chr11 65267874 Exonic hg19 NA AA057327 Out-of-frame Inter-chr q13.13 q13.1 122527 ChimerSeq ChiTaRs ChiTaRs MPDU1-MPDU1 MPDU1 chr17 7495110 MPDU1 chr17 7494548 Exonic hg19 NA BG251147 Out-of-frame Intra-chr p13.1 p13.1 122528 ChimerSeq ChiTaRs ChiTaRs SEMA4B-CACNA1C SEMA4B chr15 90772681 CACNA1C chr12 2407303 Exonic hg19 NA AW897907 Out-of-frame Inter-chr q26.1 p13.33 122529 ChimerSeq ChiTaRs ChiTaRs MNAT1-SEPT2 MNAT1 chr14 61411800 2002_ 9_ 1_ chr2 242292953 Exonic hg19 NA BI036357 Out-of-frame Inter-chr q23.1 122530 ChimerSeq ChiTaRs ChiTaRs KDM5A-MED11 KDM5A chr12 390639 MED11 chr17 4636377 Exonic hg19 NA BP397047 Out-of-frame Inter-chr p13.33 Tumor suppressor gene p13.2 122531 ChimerSeq ChiTaRs ChiTaRs URI1-URI1 URI1 chr19 30506717 URI1 chr19 30507142 Exonic hg19 NA AA828807 Out-of-frame Intra-chr q12 q12 122532 ChimerSeq ChiTaRs ChiTaRs CALM3-MSN CALM3 chr19 47112203 MSN chrX 64960799 Exonic hg19 NA AW867517 Out-of-frame Inter-chr q13.32 q12 122533 ChimerSeq ChiTaRs ChiTaRs WNT5B-PPP2R1A WNT5B chr12 1756398 PPP2R1A chr19 52719277 Exonic hg19 NA AI419727 Out-of-frame Inter-chr p13.33 q13.41 Oncogene 122534 ChimerSeq ChiTaRs ChiTaRs SNX22-INPP5B SNX22 chr15 64452326 INPP5B chr1 38338211 Exonic hg19 NA BF988467 Out-of-frame Inter-chr q22.31 p34.3 122535 ChimerSeq ChiTaRs ChiTaRs ALDH2-KCNE1 ALDH2 chr12 112247784 KCNE1 chr21 35819819 Exonic hg19 NA CA309127 Out-of-frame Inter-chr q24.12 q22.12 122536 ChimerSeq ChiTaRs ChiTaRs PIGU-ALG5 PIGU chr20 33225710 ALG5 chr13 37524107 Exonic hg19 NA HM245395 Out-of-frame Inter-chr q11.22 q13.3 122537 ChimerSeq ChiTaRs ChiTaRs SOS2-SOS2 SOS2 chr14 50698091 SOS2 chr14 50585478 Exonic hg19 NA AB209277 Out-of-frame Intra-chr q21.3 q21.3 122538 ChimerSeq ChiTaRs ChiTaRs NCAPH2-USP39 NCAPH2 chr22 50961901 USP39 chr2 85866349 Exonic hg19 NA CB217287 Out-of-frame Inter-chr q13.33 p11.2 122539 ChimerSeq ChiTaRs ChiTaRs TMED2-TMED2 TMED2 chr12 124074995 TMED2 chr12 124069247 Exonic hg19 NA BQ776227 Out-of-frame Intra-chr q24.31 q24.31 122540 ChimerSeq ChiTaRs ChiTaRs HSP90AA1-C14orf37 HSP90AA1 chr14 102551289 C14orf37 chr14 58737660 Exonic hg19 NA AV707097 Out-of-frame Intra-chr q32.31 Oncogene q23.1 122541 ChimerSeq ChiTaRs ChiTaRs RPH3AL-PAM RPH3AL chr17 180084 PAM chr5 102357224 Exonic hg19 NA BE709807 Out-of-frame Inter-chr q21.1 122542 ChimerSeq ChiTaRs ChiTaRs TCF12-CMAS TCF12 chr15 57283551 CMAS chr12 22199173 Exonic hg19 NA DB053027 Out-of-frame Inter-chr q21.3 Oncogene Transcription factor p12.1 122543 ChimerSeq ChiTaRs ChiTaRs SNRPD3-SNRPD3 SNRPD3 chr22 24970293 SNRPD3 chr22 24969661 Exonic hg19 NA CB053297 Out-of-frame Intra-chr q11.23 q11.23 122544 ChimerSeq ChiTaRs ChiTaRs TCFL5-TCFL5 TCFL5 chr20 61484674 TCFL5 chr20 61485407 Exonic hg19 NA AA346677 Out-of-frame Intra-chr q13.33 Transcription factor q13.33 Transcription factor 122545 ChimerSeq ChiTaRs ChiTaRs DYRK1A-MTMR1 DYRK1A chr21 38809418 MTMR1 chrX 149895693 Exonic hg19 NA M78377 Out-of-frame Inter-chr q22.13 CMGC:DYRK q28 122546 ChimerSeq ChiTaRs ChiTaRs OGFOD1-OGFOD1 OGFOD1 chr16 56496546 OGFOD1 chr16 56510071 Exonic hg19 NA BG996237 Out-of-frame Intra-chr q13 q13 122547 ChimerSeq ChiTaRs ChiTaRs SARNP-HDLBP SARNP chr12 56182871 HDLBP chr2 242240266 Exonic hg19 NA AI393207 Out-of-frame Inter-chr q13.2 q37.3 122548 ChimerSeq ChiTaRs ChiTaRs ZNF180-ZNF180 ZNF180 chr19 45004029 ZNF180 chr19 45003595 Exonic hg19 NA BG945067 Out-of-frame Intra-chr q13.31 Transcription factor q13.31 Transcription factor 122549 ChimerSeq ChiTaRs ChiTaRs POLG-POLG POLG chr15 89866046 POLG chr15 89865015 Exonic hg19 NA BQ306477 Out-of-frame Intra-chr q26.1 q26.1 122550 ChimerSeq ChiTaRs ChiTaRs SOCS7-SOCS7 SOCS7 chr17 36561846 SOCS7 chr17 36561576 Exonic hg19 NA AI682207 3'UTR-CDS Intra-chr q12 q12 122551 ChimerSeq ChiTaRs ChiTaRs TCFL5-SNRPB TCFL5 chr20 61476986 SNRPB chr20 2444397 Exonic hg19 NA BG472537 Out-of-frame Intra-chr q13.33 Transcription factor p13 122552 ChimerSeq ChiTaRs ChiTaRs AATF-AATF AATF chr17 35311130 AATF chr17 35311162 Exonic hg19 NA AA099987 Out-of-frame Intra-chr 122553 ChimerSeq ChiTaRs ChiTaRs NXN-RBL2 NXN chr17 791922 RBL2 chr16 53513796 Exonic hg19 NA AW952727 Out-of-frame Inter-chr p13.3 q12.2 Tumor suppressor gene 122554 ChimerSeq ChiTaRs ChiTaRs ANKRD13D-ANKRD13D ANKRD13D chr11 67067359 ANKRD13D chr11 67057883 Exonic hg19 NA CN354157 5'UTR-CDS Intra-chr q13.2 q13.2 122555 ChimerSeq ChiTaRs ChiTaRs MRPS6-MRPS6 MRPS6 chr21 35514816 MRPS6 chr21 35514813 Exonic hg19 NA BI002237 Out-of-frame Intra-chr q22.11 q22.11 122556 ChimerSeq ChiTaRs ChiTaRs SAP30BP-BEAN1 SAP30BP chr17 73663494 BEAN1 chr16 66526834 Exonic hg19 NA CD624677 Out-of-frame Inter-chr q25.1 q21 122557 ChimerSeq ChiTaRs ChiTaRs PKP2-CD3EAP PKP2 chr12 32995524 CD3EAP chr19 45912920 Exonic hg19 NA BG956107 Out-of-frame Inter-chr p11.21 q13.32 122558 ChimerSeq ChiTaRs ChiTaRs BOLA2-CNNM2 BOLA2 chr16 30005413 CNNM2 chr10 104828386 Exonic hg19 NA BG988047 Out-of-frame Inter-chr p11.2 q24.32 122559 ChimerSeq ChiTaRs ChiTaRs EVL-HNRNPA2B1 EVL chr14 100610573 HNRNPA2B1 chr7 26236016 Exonic hg19 NA BU677717 3'UTR-CDS Inter-chr q32.2 p15.2 122560 ChimerSeq ChiTaRs ChiTaRs CLEC14A-FXYD6-FXYD2 CLEC14A chr14 38723576 FXYD6-FXYD2 chr11 117708891 Exonic hg19 NA AI989617 Out-of-frame Inter-chr q21.1 q23.3 122561 ChimerSeq ChiTaRs ChiTaRs NAP1L1-ZNF644 NAP1L1 chr12 76478425 ZNF644 chr1 91486246 Exonic hg19 NA BE883237 Out-of-frame Inter-chr q21.2 p22.2 Transcription factor 122562 ChimerSeq ChiTaRs ChiTaRs PTPN1-AMICA1 PTPN1 chr20 49142476 AMICA1 chr11 118074305 Exonic hg19 NA BQ337397 Out-of-frame Inter-chr q13.13 Tumor suppressor gene 122563 ChimerSeq ChiTaRs ChiTaRs EXOC7-EXOC7 EXOC7 chr17 74084966 EXOC7 chr17 74079687 Exonic hg19 NA BF855617 Out-of-frame Intra-chr q25.1 q25.1 122564 ChimerSeq ChiTaRs ChiTaRs RABEP1-EIF4G1 RABEP1 chr17 5281981 EIF4G1 chr3 184039494 Exonic hg19 NA AI656047 Out-of-frame Inter-chr p13.2 q27.1 122565 ChimerSeq ChiTaRs ChiTaRs MYL12A-TCN1 MYL12A chr18 3253987 TCN1 chr11 59629000 Exonic hg19 NA BF825717 Out-of-frame Inter-chr p11.31 q12.1 122566 ChimerSeq ChiTaRs ChiTaRs ATF5-ATF5 ATF5 chr19 50436652 ATF5 chr19 50436769 Exonic hg19 NA BM466687 Out-of-frame Intra-chr q13.33 Transcription factor q13.33 Transcription factor 122567 ChimerSeq ChiTaRs ChiTaRs C16orf45-PNCK C16orf45 chr16 15681820 PNCK chrX 152935905 Exonic hg19 NA AI141657 Out-of-frame Inter-chr q28 122568 ChimerSeq ChiTaRs ChiTaRs CNOT2-AHSG CNOT2 chr12 70718054 AHSG chr3 186338832 Exonic hg19 NA AF130057 Out-of-frame Inter-chr q15 q27.3 122569 ChimerSeq ChiTaRs ChiTaRs UBE2V1-UBE2V1 UBE2V1 chr20 48709902 UBE2V1 chr20 48709900 Exonic hg19 NA AW807957 Out-of-frame Intra-chr q13.13 q13.13 122570 ChimerSeq ChiTaRs ChiTaRs PKP2-TAOK1 PKP2 chr12 33046826 TAOK1 chr17 27866942 Exonic hg19 NA BF509237 Out-of-frame Inter-chr p11.21 q11.2 122571 ChimerSeq ChiTaRs ChiTaRs RBM14-RBM4-RBM4 RBM14-RBM4 chr11 66413059 RBM4 chr11 66430382 Exonic hg19 NA BE154847 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 Tumor suppressor gene 122572 ChimerSeq ChiTaRs ChiTaRs MEGF11-FKBP10 MEGF11 chr15 66190311 FKBP10 chr17 39979137 Exonic hg19 NA AA451977 Out-of-frame Inter-chr q22.31 q21.2 122573 ChimerSeq ChiTaRs ChiTaRs GTF2H3-ZNF556 GTF2H3 chr12 124145334 ZNF556 chr19 2873769 Exonic hg19 NA BC016767 3'UTR-CDS Inter-chr q24.31 p13.3 Transcription factor 122574 ChimerSeq ChiTaRs ChiTaRs C17orf72-IL15 C17orf72 chr17 62080113 IL15 chr4 142654244 Exonic hg19 NA AA258597 Out-of-frame Inter-chr q31.21 122575 ChimerSeq ChiTaRs ChiTaRs KCNJ15-KCNJ15 KCNJ15 chr21 39673529 KCNJ15 chr21 39673504 Exonic hg19 NA BE182927 Out-of-frame Intra-chr q22.13 q22.13 122576 ChimerSeq ChiTaRs ChiTaRs ARL17A-AGTRAP ARL17A chr17 752015 AGTRAP chr1 11802838 Exonic hg19 NA BQ335717 Out-of-frame Inter-chr q21.31 p36.22 122577 ChimerSeq ChiTaRs ChiTaRs RRP1B-CAMTA1 RRP1B chr21 45094569 CAMTA1 chr1 6845608 Exonic hg19 NA BI861937 Out-of-frame Inter-chr q22.3 p36.31 Tumor suppressor gene Transcription factor 122578 ChimerSeq ChiTaRs ChiTaRs NAE1-NAE1 NAE1 chr16 66851392 NAE1 chr16 66852462 Exonic hg19 NA BI042477 Out-of-frame Intra-chr q22.1 q22.1 122579 ChimerSeq ChiTaRs ChiTaRs MRPL51-MRPL51 MRPL51 chr12 6601453 MRPL51 chr12 6601469 Exonic hg19 NA CA313587 Out-of-frame Intra-chr p13.31 p13.31 122580 ChimerSeq ChiTaRs ChiTaRs TBC1D24-TBC1D24 TBC1D24 chr16 2570219 TBC1D24 chr16 2569965 Exonic hg19 NA BU608037 Out-of-frame Intra-chr p13.3 p13.3 122581 ChimerSeq ChiTaRs ChiTaRs GPRC5B-GPRC5B GPRC5B chr16 19884323 GPRC5B chr16 19871492 Exonic hg19 NA BP199967 Out-of-frame Intra-chr p12.3 p12.3 122582 ChimerSeq ChiTaRs ChiTaRs SMARCB1-SMARCB1 SMARCB1 chr22 24175848 SMARCB1 chr22 24129341 Exonic hg19 NA BE933287 Out-of-frame Intra-chr q11.23 Oncogene Tumor suppressor gene q11.23 Oncogene Tumor suppressor gene 122583 ChimerSeq ChiTaRs ChiTaRs SPHK1-SPHK1 SPHK1 chr17 74377979 SPHK1 chr17 74377210 Exonic hg19 NA CA426947 Out-of-frame Intra-chr q25.1 q25.1 122584 ChimerSeq ChiTaRs ChiTaRs NEK9-NEK9 NEK9 chr14 75559597 NEK9 chr14 75558032 Exonic hg19 NA CB052077 Out-of-frame Intra-chr q24.3 Other:NEK q24.3 Other:NEK 122585 ChimerSeq ChiTaRs ChiTaRs ACADVL-ACADVL ACADVL chr17 7124817 ACADVL chr17 7124357 Exonic hg19 NA BI013807 Out-of-frame Intra-chr p13.1 p13.1 122586 ChimerSeq ChiTaRs ChiTaRs DOCK9-GRAMD1B DOCK9 chr13 99560066 GRAMD1B chr11 123427003 Exonic hg19 NA M78837 Out-of-frame Inter-chr q32.3 q24.1 122587 ChimerSeq ChiTaRs ChiTaRs ZNRF1-SPATS2L ZNRF1 chr16 75141915 SPATS2L chr2 201296905 Exonic hg19 NA BF064167 Out-of-frame Inter-chr q23.1 q33.1 122588 ChimerSeq ChiTaRs ChiTaRs GAS7-GAS7 GAS7 chr17 9814755 GAS7 chr17 9814850 Exonic hg19 NA AA323217 Out-of-frame Intra-chr p13.1 p13.1 122589 ChimerSeq ChiTaRs ChiTaRs SCFD1-MLLT3 SCFD1 chr14 31091764 MLLT3 chr9 20549656 Exonic hg19 NA BG195777 Out-of-frame Inter-chr q12 p21.3 122590 ChimerSeq ChiTaRs ChiTaRs KRT7-KRT7 KRT7 chr12 52629319 KRT7 chr12 52629370 Exonic hg19 NA BF750197 Out-of-frame Intra-chr q13.13 q13.13 122591 ChimerSeq ChiTaRs ChiTaRs CCND2-CREB5 CCND2 chr12 4411021 CREB5 chr7 28861052 Exonic hg19 NA BF920997 Out-of-frame Inter-chr p13.32 Oncogene p15.1 Transcription factor 122592 ChimerSeq ChiTaRs ChiTaRs C17orf76-AS1-C6orf89 C17orf76-AS1 chr17 16345332 C6orf89 chr6 36878243 Exonic hg19 NA BM677027 Out-of-frame Inter-chr p21.2 Tumor suppressor gene 122593 ChimerSeq ChiTaRs ChiTaRs N4BP2L2-ADAMTS3 N4BP2L2 chr13 33101671 ADAMTS3 chr4 73284951 Exonic hg19 NA BI014307 Out-of-frame Inter-chr q13.1 q13.3 122594 ChimerSeq ChiTaRs ChiTaRs MALT1-MALT1 MALT1 chr18 56412298 MALT1 chr18 56412025 Exonic hg19 NA BF748997 Out-of-frame Intra-chr q21.32 Oncogene q21.32 Oncogene 122595 ChimerSeq ChiTaRs ChiTaRs PDXDC1-SMARCC2 PDXDC1 chr16 15141878 SMARCC2 chr12 56557112 Exonic hg19 NA BC015697 Out-of-frame Inter-chr p13.11 q13.2 122596 ChimerSeq ChiTaRs ChiTaRs ZNF710-ZNF710 ZNF710 chr15 90575163 ZNF710 chr15 90575110 Exonic hg19 NA BF357387 Out-of-frame Intra-chr q26.1 Transcription factor q26.1 Transcription factor 122597 ChimerSeq ChiTaRs ChiTaRs ZMYND8-ZMYND8 ZMYND8 chr20 45878184 ZMYND8 chr20 45874752 Exonic hg19 NA BF086007 Out-of-frame Intra-chr q13.12 q13.12 122598 ChimerSeq ChiTaRs ChiTaRs VPS4B-ATP6V1A VPS4B chr18 61057856 ATP6V1A chr3 113529121 Exonic hg19 NA AI827667 Out-of-frame Inter-chr q21.33 q13.31 122599 ChimerSeq ChiTaRs ChiTaRs IFT140-IFT140 IFT140 chr16 1585057 IFT140 chr16 1591293 Exonic hg19 NA BF223207 Out-of-frame Intra-chr p13.3 p13.3 122600 ChimerSeq ChiTaRs ChiTaRs SYT4-ATP2A2 SYT4 chr18 40857511 ATP2A2 chr12 110783888 Exonic hg19 NA DA389857 Out-of-frame Inter-chr q12.3 q24.11 122601 ChimerSeq ChiTaRs ChiTaRs UBE2V1-UBE2V1 UBE2V1 chr20 48709931 UBE2V1 chr20 48709900 Exonic hg19 NA AW807617 Out-of-frame Intra-chr q13.13 q13.13 122602 ChimerSeq ChiTaRs ChiTaRs SIAE-SIAE SIAE chr11 124508502 SIAE chr11 124517353 Exonic hg19 NA BG960497 Out-of-frame Intra-chr q24.2 q24.2 122603 ChimerSeq ChiTaRs ChiTaRs RAB35-SLC25A36 RAB35 chr12 120535036 SLC25A36 chr3 140675459 Exonic hg19 NA BE819067 Out-of-frame Inter-chr q24.23 q23 122604 ChimerSeq ChiTaRs ChiTaRs RPN2-RPN2 RPN2 chr20 35827477 RPN2 chr20 35833177 Exonic hg19 NA BI051087 Out-of-frame Intra-chr q11.23 q11.23 122605 ChimerSeq ChiTaRs ChiTaRs MMP11-YKT6 MMP11 chr22 24126845 YKT6 chr7 44250554 Exonic hg19 NA AF370417 Out-of-frame Inter-chr q11.23 p13 122606 ChimerSeq ChiTaRs ChiTaRs DHCR7-DHCR7 DHCR7 chr11 71145875 DHCR7 chr11 71145769 Exonic hg19 NA CR741097 Out-of-frame Intra-chr q13.4 q13.4 122607 ChimerSeq ChiTaRs ChiTaRs COMMD4-COMMD4 COMMD4 chr15 75632539 COMMD4 chr15 75632073 Exonic hg19 NA BI002637 Out-of-frame Intra-chr q24.2 q24.2 122608 ChimerSeq ChiTaRs ChiTaRs LSM14B-RAP1B LSM14B chr20 60704636 RAP1B chr12 69020555 Exonic hg19 NA BC057387 Out-of-frame Inter-chr q13.33 q15 122609 ChimerSeq ChiTaRs ChiTaRs IQGAP1-PSMD4 IQGAP1 chr15 91045467 PSMD4 chr1 151227233 Exonic hg19 NA U51007 Out-of-frame Inter-chr q26.1 q21.3 122610 ChimerSeq ChiTaRs ChiTaRs YWHAB-DZIP1 YWHAB chr20 43537082 DZIP1 chr13 96271828 Exonic hg19 NA BU675977 Out-of-frame Inter-chr q13.12 q32.1 Transcription factor 122611 ChimerSeq ChiTaRs ChiTaRs CCNF-C6orf165 CCNF chr16 2508855 C6orf165 chr6 88130762 Exonic hg19 NA BU677477 Out-of-frame Inter-chr p13.3 122612 ChimerSeq ChiTaRs ChiTaRs CABLES2-CABLES2 CABLES2 chr20 60965747 CABLES2 chr20 60967477 Exonic hg19 NA BF109077 Out-of-frame Intra-chr q13.33 q13.33 122613 ChimerSeq ChiTaRs ChiTaRs RPH3AL-ESYT2 RPH3AL chr17 62772 ESYT2 chr7 158524301 Exonic hg19 NA BF939647 Out-of-frame Inter-chr q36.3 122614 ChimerSeq ChiTaRs ChiTaRs NPTN-NPTN NPTN chr15 73919337 NPTN chr15 73917939 Exonic hg19 NA BE086607 Out-of-frame Intra-chr q24.1 q24.1 122615 ChimerSeq ChiTaRs ChiTaRs TMBIM6-TMBIM6 TMBIM6 chr12 50158687 TMBIM6 chr12 50158661 Exonic hg19 NA BI093457 Out-of-frame Intra-chr q13.12 q13.12 122616 ChimerSeq ChiTaRs ChiTaRs PKNOX1-GPM6B PKNOX1 chr21 44452034 GPM6B chrX 13824062 Exonic hg19 NA U68727 Out-of-frame Inter-chr q22.3 Tumor suppressor gene Transcription factor p22.2 122617 ChimerSeq ChiTaRs ChiTaRs ZZEF1-ZZEF1 ZZEF1 chr17 3961395 ZZEF1 chr17 3961406 Exonic hg19 NA BF990727 Out-of-frame Intra-chr p13.2 p13.2 122618 ChimerSeq ChiTaRs ChiTaRs CASP14-ECT2 CASP14 chr19 15168836 ECT2 chr3 172471268 Exonic hg19 NA BG878547 Out-of-frame Inter-chr p13.12 q26.31 Tumor suppressor gene 122619 ChimerSeq ChiTaRs ChiTaRs FBXW8-FBXW8 FBXW8 chr12 117429107 FBXW8 chr12 117429055 Exonic hg19 NA CV322777 Out-of-frame Intra-chr q24.22 q24.22 122620 ChimerSeq ChiTaRs ChiTaRs TMEM87A-TMEM87A TMEM87A chr15 42503472 TMEM87A chr15 42503509 Exonic hg19 NA BU609207 Out-of-frame Intra-chr q15.1 q15.1 122621 ChimerSeq ChiTaRs ChiTaRs TJP1-YPEL5 TJP1 chr15 30027810 YPEL5 chr2 30381864 Exonic hg19 NA BU620057 Out-of-frame Inter-chr p23.1 122622 ChimerSeq ChiTaRs ChiTaRs MYO1E-HNRNPA2B1 MYO1E chr15 59428769 HNRNPA2B1 chr7 26229877 Exonic hg19 NA AI888697 Out-of-frame Inter-chr q22.2 p15.2 122623 ChimerSeq ChiTaRs ChiTaRs AREL1-AREL1 AREL1 chr14 75128100 AREL1 chr14 75128125 Exonic hg19 NA BE048757 Out-of-frame Intra-chr q24.3 q24.3 122624 ChimerSeq ChiTaRs ChiTaRs LARGE-ST6GAL2 LARGE chr22 34302785 ST6GAL2 chr2 107429182 Exonic hg19 NA AW896087 Out-of-frame Inter-chr q12.3 122625 ChimerSeq ChiTaRs ChiTaRs MALAT1-ANKRD44 MALAT1 chr11 65268648 ANKRD44 chr2 197986109 Exonic hg19 NA BE694147 Out-of-frame Inter-chr q13.1 q33.1 122626 ChimerSeq ChiTaRs ChiTaRs BOLA2-MLPH BOLA2 chr16 29465604 MLPH chr2 238395967 Exonic hg19 NA BC014948 Out-of-frame Inter-chr p11.2 q37.3 122627 ChimerSeq ChiTaRs ChiTaRs CALR-CALR CALR chr19 13054375 CALR chr19 13054369 Exonic hg19 NA AW367058 Out-of-frame Intra-chr p13.13 p13.13 122628 ChimerSeq ChiTaRs ChiTaRs DYNLRB1-ZNF776 DYNLRB1 chr20 33122882 ZNF776 chr19 58220408 Exonic hg19 NA T05418 Out-of-frame Inter-chr q11.22 q13.43 Transcription factor 122629 ChimerSeq ChiTaRs ChiTaRs IL4R-S100A16 IL4R chr16 27373850 S100A16 chr1 153579953 Exonic hg19 NA BE717238 Out-of-frame Inter-chr p12.1 q21.3 122630 ChimerSeq ChiTaRs ChiTaRs CDC25B-CDC25B CDC25B chr20 3785970 CDC25B chr20 3785983 Exonic hg19 NA BM702428 Out-of-frame Intra-chr p13 p13 122631 ChimerSeq ChiTaRs ChiTaRs FAN1-FAN1 FAN1 chr15 31235174 FAN1 chr15 31235127 Exonic hg19 NA CN263708 Out-of-frame Intra-chr q13.3 q13.3 122632 ChimerSeq ChiTaRs ChiTaRs FMN1-ATP5B FMN1 chr15 33359029 ATP5B chr12 57031962 Exonic hg19 NA AK127078 Out-of-frame Inter-chr q13.3 122633 ChimerSeq ChiTaRs ChiTaRs CKM-PLD2 CKM chr19 45818839 PLD2 chr17 4714517 Exonic hg19 NA BG994088 Out-of-frame Inter-chr q13.32 p13.2 122634 ChimerSeq ChiTaRs ChiTaRs LOC400221-LOC400221 LOC400221 chr14 62100337 LOC400221 chr14 62079841 Exonic hg19 NA BG324848 Out-of-frame Intra-chr 122635 ChimerSeq ChiTaRs ChiTaRs APPL2-APPL2 APPL2 chr12 105567301 APPL2 chr12 105567099 Exonic hg19 NA BF092438 Out-of-frame Intra-chr q23.3 q23.3 122636 ChimerSeq ChiTaRs ChiTaRs BRD4-BRD4 BRD4 chr19 15366405 BRD4 chr19 15359771 Exonic hg19 NA BF345618 Out-of-frame Intra-chr p13.12 Atypical:BRD p13.12 Atypical:BRD 122637 ChimerSeq ChiTaRs ChiTaRs B2M-B2M B2M chr15 45010343 B2M chr15 45007846 Exonic hg19 NA AW205028 Out-of-frame Intra-chr Oncogene Oncogene 122638 ChimerSeq ChiTaRs ChiTaRs SMG8-SMG8 SMG8 chr17 57290863 SMG8 chr17 57290427 Exonic hg19 NA BU178528 Out-of-frame Intra-chr q22 q22 122639 ChimerSeq ChiTaRs ChiTaRs SMARCB1-SMARCB1 SMARCB1 chr22 24134028 SMARCB1 chr22 24167511 Exonic hg19 NA BF088188 Out-of-frame Intra-chr q11.23 Oncogene Tumor suppressor gene q11.23 Oncogene Tumor suppressor gene 122640 ChimerSeq ChiTaRs ChiTaRs RAB11B-RAB11B RAB11B chr19 8469174 RAB11B chr19 8469152 Exonic hg19 NA BM016038 Out-of-frame Intra-chr p13.2 p13.2 122641 ChimerSeq ChiTaRs ChiTaRs TENM4-CALR TENM4 chr11 78861068 CALR chr19 13051432 Exonic hg19 NA BE717818 Out-of-frame Inter-chr q14.1 p13.13 122642 ChimerSeq ChiTaRs ChiTaRs CNOT1-CNOT1 CNOT1 chr16 58651042 CNOT1 chr16 58649471 Exonic hg19 NA AW835608 Out-of-frame Intra-chr q21 q21 122643 ChimerSeq ChiTaRs ChiTaRs SERPINA5-SERPINA5 SERPINA5 chr14 95059371 SERPINA5 chr14 95059361 Exonic hg19 NA AA837688 Out-of-frame Intra-chr q32.13 q32.13 122644 ChimerSeq ChiTaRs ChiTaRs DYNC1H1-DYNC1H1 DYNC1H1 chr14 102517125 DYNC1H1 chr14 102516832 Exonic hg19 NA AI652598 Out-of-frame Intra-chr q32.31 q32.31 122645 ChimerSeq ChiTaRs ChiTaRs GPN3-GPN3 GPN3 chr12 110893480 GPN3 chr12 110893620 Exonic hg19 NA AA807808 Out-of-frame Intra-chr q24.11 q24.11 122646 ChimerSeq ChiTaRs ChiTaRs GATA6-TBL1Y GATA6 chr18 19757201 TBL1Y chrY 6887705 Exonic hg19 NA AW015488 Out-of-frame Inter-chr q11.2 Transcription factor p11.2 122647 ChimerSeq ChiTaRs ChiTaRs MLF2-TP53 MLF2 chr12 6857456 TP53 chr17 7572411 Exonic hg19 NA BM991038 Out-of-frame Inter-chr p13.31 p13.1 Oncogene Tumor suppressor gene Transcription factor 122648 ChimerSeq ChiTaRs ChiTaRs FLII-FLII FLII chr17 18149092 FLII chr17 18149120 Exonic hg19 NA BE467038 Out-of-frame Intra-chr 122649 ChimerSeq ChiTaRs ChiTaRs ZFP106-ZFP106 ZFP106 chr15 42707118 ZFP106 chr15 42706405 Exonic hg19 NA BG169418 Out-of-frame Intra-chr 122650 ChimerSeq ChiTaRs ChiTaRs KIAA1033-VPS41 KIAA1033 chr12 105561002 VPS41 chr7 38829401 Exonic hg19 NA AI332438 Out-of-frame Inter-chr p14.1 122651 ChimerSeq ChiTaRs ChiTaRs STT3A-LRRC47 STT3A chr11 125464195 LRRC47 chr1 3696902 Exonic hg19 NA CN404588 Out-of-frame Inter-chr q24.2 p36.32 122652 ChimerSeq ChiTaRs ChiTaRs PIP4K2B-PIP4K2B PIP4K2B chr17 36924670 PIP4K2B chr17 36924325 Exonic hg19 NA BF991438 Out-of-frame Intra-chr q12 q12 122653 ChimerSeq ChiTaRs ChiTaRs RASSF8-RASSF8 RASSF8 chr12 26223180 RASSF8 chr12 26223172 Exonic hg19 NA AA856938 Out-of-frame Intra-chr p12.1 Tumor suppressor gene p12.1 Tumor suppressor gene 122654 ChimerSeq ChiTaRs ChiTaRs MON2-FKBP6 MON2 chr12 62902925 FKBP6 chr7 72615306 Exonic hg19 NA BC111488 Out-of-frame Inter-chr q14.1 q11.23 122655 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65272000 MALAT1 chr11 65266558 Exonic hg19 NA BG427318 Out-of-frame Intra-chr q13.1 q13.1 122656 ChimerSeq ChiTaRs ChiTaRs DCC-DCC DCC chr18 51058713 DCC chr18 51058322 Exonic hg19 NA AA740208 Out-of-frame Intra-chr q21.2 Oncogene Tumor suppressor gene q21.2 Oncogene Tumor suppressor gene 122657 ChimerSeq ChiTaRs ChiTaRs BSG-BSG BSG chr19 581442 BSG chr19 581435 Exonic hg19 NA BM706468 Out-of-frame Intra-chr p13.3 p13.3 122658 ChimerSeq ChiTaRs ChiTaRs FAM211A-FAM211A FAM211A chr17 16375992 FAM211A chr17 16375690 Exonic hg19 NA BE076408 Out-of-frame Intra-chr 122659 ChimerSeq ChiTaRs ChiTaRs ARPC3-DPYSL5 ARPC3 chr12 110874795 DPYSL5 chr2 27170959 Exonic hg19 NA DA735098 Out-of-frame Inter-chr q24.11 p23.3 122660 ChimerSeq ChiTaRs ChiTaRs XRCC6-SIVA1 XRCC6 chr22 42056897 SIVA1 chr14 105224940 Exonic hg19 NA AK124078 Out-of-frame Inter-chr q13.2 q32.33 122661 ChimerSeq ChiTaRs ChiTaRs WDHD1-WDHD1 WDHD1 chr14 55457970 WDHD1 chr14 55453861 Exonic hg19 NA BM478508 Out-of-frame Intra-chr q22.3 q22.3 122662 ChimerSeq ChiTaRs ChiTaRs GAPDH-FBXL7 GAPDH chr12 6647537 FBXL7 chr5 15937518 Exonic hg19 NA BQ671968 3'UTR-3'UTR Inter-chr p13.31 p15.1 122663 ChimerSeq ChiTaRs ChiTaRs PDGFD-NCCRP1 PDGFD chr11 103791908 NCCRP1 chr19 39692193 Exonic hg19 NA AK025378 Out-of-frame Inter-chr q22.3 q13.2 122664 ChimerSeq ChiTaRs ChiTaRs CAPN5-CYP2S1 CAPN5 chr11 76835295 CYP2S1 chr19 41711957 Exonic hg19 NA BF878278 Out-of-frame Inter-chr q13.5 q13.2 122665 ChimerSeq ChiTaRs ChiTaRs ALYREF-PRDX3 ALYREF chr17 79846447 PRDX3 chr10 120927232 Exonic hg19 NA BC008038 Out-of-frame Inter-chr q25.3 q26.11 122666 ChimerSeq ChiTaRs ChiTaRs ACTG1-COL5A1 ACTG1 chr17 79477326 COL5A1 chr9 137736335 Exonic hg19 NA CN257578 Out-of-frame Inter-chr q25.3 q34.3 122667 ChimerSeq ChiTaRs ChiTaRs TPP2-MYO5B TPP2 chr13 103278434 MYO5B chr18 47519516 Exonic hg19 NA BF996738 Out-of-frame Inter-chr q33.1 q21.1 122668 ChimerSeq ChiTaRs ChiTaRs SNAP25-EHMT1 SNAP25 chr20 10288007 EHMT1 chr9 140514186 Exonic hg19 NA AW900408 Out-of-frame Inter-chr p12.2 q34.3 122669 ChimerSeq ChiTaRs ChiTaRs NAP1L1-NAP1L1 NAP1L1 chr12 76454026 NAP1L1 chr12 76448837 Exonic hg19 NA CA420158 Out-of-frame Intra-chr q21.2 q21.2 122670 ChimerSeq ChiTaRs ChiTaRs COL1A1-MYO1B COL1A1 chr17 48262803 MYO1B chr2 192250740 Exonic hg19 NA AI367808 Out-of-frame Inter-chr q21.33 Oncogene q32.3 122671 ChimerSeq ChiTaRs ChiTaRs C16orf72-PAK1 C16orf72 chr16 9211423 PAK1 chr11 77033418 Exonic hg19 NA BM720598 Out-of-frame Inter-chr p13.2 q14.1 STE:STE20 122672 ChimerSeq ChiTaRs ChiTaRs PNPLA6-PNPLA6 PNPLA6 chr19 7618173 PNPLA6 chr19 7616962 Exonic hg19 NA BF846178 Out-of-frame Intra-chr p13.2 p13.2 122673 ChimerSeq ChiTaRs ChiTaRs BST2-BST2 BST2 chr19 17514963 BST2 chr19 17514954 Exonic hg19 NA BE826138 Out-of-frame Intra-chr p13.11 p13.11 122674 ChimerSeq ChiTaRs ChiTaRs NARS2-RSF1 NARS2 chr11 78240831 RSF1 chr11 77416213 Exonic hg19 NA BF947498 Out-of-frame Intra-chr q14.1 q14.1 122675 ChimerSeq ChiTaRs ChiTaRs STT3A-UBQLN4 STT3A chr11 125475574 UBQLN4 chr1 156013163 Exonic hg19 NA BE837748 Out-of-frame Inter-chr q24.2 q22 122676 ChimerSeq ChiTaRs ChiTaRs ARFGAP1-ARFGAP1 ARFGAP1 chr20 61921140 ARFGAP1 chr20 61920874 Exonic hg19 NA AA402828 Out-of-frame Intra-chr q13.33 q13.33 122677 ChimerSeq ChiTaRs ChiTaRs NMRAL1-ZNF512B NMRAL1 chr16 4513824 ZNF512B chr20 62590712 Exonic hg19 NA BF772168 Out-of-frame Inter-chr p13.3 q13.33 Transcription factor 122678 ChimerSeq ChiTaRs ChiTaRs CYP19A1-EFTUD2 CYP19A1 chr15 51630344 EFTUD2 chr17 42953384 Exonic hg19 NA CV359808 Out-of-frame Inter-chr q21.2 q21.31 122679 ChimerSeq ChiTaRs ChiTaRs NACA-ANK2 NACA chr12 57111841 ANK2 chr4 114095580 Exonic hg19 NA F00928 Out-of-frame Inter-chr q13.3 q25 122680 ChimerSeq ChiTaRs ChiTaRs RPLP0-MTMR10 RPLP0 chr12 120634684 MTMR10 chr15 31251088 Exonic hg19 NA AI765188 Out-of-frame Inter-chr q24.23 q13.3 122681 ChimerSeq ChiTaRs ChiTaRs FKBP4-DIP2C FKBP4 chr12 2912914 DIP2C chr10 681193 Exonic hg19 NA T05258 Out-of-frame Inter-chr p13.33 p15.3 122682 ChimerSeq ChiTaRs ChiTaRs TJP1-TJP1 TJP1 chr15 30114315 TJP1 chr15 30010544 Exonic hg19 NA BF515358 Out-of-frame Intra-chr 122683 ChimerSeq ChiTaRs ChiTaRs COL1A1-COL1A1 COL1A1 chr17 48262018 COL1A1 chr17 48262712 Exonic hg19 NA CA429068 Out-of-frame Intra-chr q21.33 Oncogene q21.33 Oncogene 122684 ChimerSeq ChiTaRs ChiTaRs COL18A1-COL18A1 COL18A1 chr21 46933352 COL18A1 chr21 46925294 Exonic hg19 NA W07798 Out-of-frame Intra-chr q22.3 q22.3 122685 ChimerSeq ChiTaRs ChiTaRs RCAN1-RCAN1 RCAN1 chr21 35890137 RCAN1 chr21 35890135 Exonic hg19 NA L25478 Out-of-frame Intra-chr q22.12 q22.12 122686 ChimerSeq ChiTaRs ChiTaRs AKT2-AKT2 AKT2 chr19 40741938 AKT2 chr19 40771186 Exonic hg19 NA BF739868 Out-of-frame Intra-chr q13.2 AGC:Akt Oncogene q13.2 AGC:Akt Oncogene 122687 ChimerSeq ChiTaRs ChiTaRs SNX29-SOX2-OT SNX29 chr16 12668144 SOX2-OT chr3 181421627 Exonic hg19 NA CD673868 Out-of-frame Inter-chr p13.13 q26.33 Oncogene Transcription factor 122688 ChimerSeq ChiTaRs ChiTaRs PHC1-SEC63 PHC1 chr12 9093008 SEC63 chr6 108214755 Exonic hg19 NA BC017748 Out-of-frame Inter-chr p13.31 q21 122689 ChimerSeq ChiTaRs ChiTaRs PCNX-PCNX PCNX chr14 71515326 PCNX chr14 71515378 Exonic hg19 NA AL079718 Out-of-frame Intra-chr 122690 ChimerSeq ChiTaRs ChiTaRs CSAD-MEG3 CSAD chr12 53551575 MEG3 chr14 101315053 Exonic hg19 NA CK005588 Out-of-frame Inter-chr q13.13 q32.2 Tumor suppressor gene 122691 ChimerSeq ChiTaRs ChiTaRs TSHZ2-TSHZ2 TSHZ2 chr20 51589558 TSHZ2 chr20 51589552 Exonic hg19 NA BQ009308 Out-of-frame Intra-chr q13.2 Transcription factor q13.2 Transcription factor 122692 ChimerSeq ChiTaRs ChiTaRs GAS8-CALML3 GAS8 chr16 90111363 CALML3 chr10 5567400 Exonic hg19 NA BX507088 Out-of-frame Inter-chr q24.3 p15.1 122693 ChimerSeq ChiTaRs ChiTaRs KLK10-KLK10 KLK10 chr19 51517831 KLK10 chr19 51517852 Exonic hg19 NA BM981978 Out-of-frame Intra-chr q13.41 Tumor suppressor gene q13.41 Tumor suppressor gene 122694 ChimerSeq ChiTaRs ChiTaRs ST6GALNAC1-NDE1 ST6GALNAC1 chr17 74625372 NDE1 chr16 15797759 Exonic hg19 NA BQ326548 Out-of-frame Inter-chr q25.1 p13.11 122695 ChimerSeq ChiTaRs ChiTaRs STAT6-CTTN STAT6 chr12 57493651 CTTN chr11 70282283 Exonic hg19 NA BF808288 Out-of-frame Inter-chr q13.3 Transcription factor q13.3 122696 ChimerSeq ChiTaRs ChiTaRs KDELR1-KDELR1 KDELR1 chr19 48886425 KDELR1 chr19 48886117 Exonic hg19 NA AI826978 Out-of-frame Intra-chr q13.33 q13.33 122697 ChimerSeq ChiTaRs ChiTaRs ATP6V1E1-IL1RN ATP6V1E1 chr22 18082817 IL1RN chr2 113890516 Exonic hg19 NA AW794588 Out-of-frame Inter-chr q11.21 q14.1 122698 ChimerSeq ChiTaRs ChiTaRs MAPT-MAPT MAPT chr17 44104344 MAPT chr17 44073963 Exonic hg19 NA AA443868 Out-of-frame Intra-chr 122699 ChimerSeq ChiTaRs ChiTaRs NHLRC3-PHIP NHLRC3 chr13 39622778 PHIP chr6 79697963 Exonic hg19 NA BF946218 Out-of-frame Inter-chr q13.3 q14.1 122700 ChimerSeq ChiTaRs ChiTaRs FAHD1-CENPE FAHD1 chr16 1878275 CENPE chr4 104029588 Exonic hg19 NA DB357538 Out-of-frame Inter-chr p13.3 q24 122701 ChimerSeq ChiTaRs ChiTaRs RARA-RARA RARA chr17 38487301 RARA chr17 38487504 Exonic hg19 NA X06538 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q21.2 Oncogene Transcription factor 122702 ChimerSeq ChiTaRs ChiTaRs RNASE2-MMP9 RNASE2 chr14 21424435 MMP9 chr20 44645101 Exonic hg19 NA BQ336318 Out-of-frame Inter-chr q11.2 q13.12 122703 ChimerSeq ChiTaRs ChiTaRs CDYL2-CDYL2 CDYL2 chr16 80718576 CDYL2 chr16 80718875 Exonic hg19 NA DW416378 Out-of-frame Intra-chr q23.2 q23.2 122704 ChimerSeq ChiTaRs ChiTaRs PLEKHF1-EIF3B PLEKHF1 chr19 30166265 EIF3B chr7 2419072 Exonic hg19 NA AI909918 Out-of-frame Inter-chr q12 p22.3 122705 ChimerSeq ChiTaRs ChiTaRs MAP2K7-MAP2K7 MAP2K7 chr19 7978660 MAP2K7 chr19 7978876 Exonic hg19 NA AW072158 Out-of-frame Intra-chr p13.2 STE:STE7 p13.2 STE:STE7 122706 ChimerSeq ChiTaRs ChiTaRs GNPTAB-GNPTAB GNPTAB chr12 102163905 GNPTAB chr12 102163950 Exonic hg19 NA BE164968 Out-of-frame Intra-chr q23.2 q23.2 122707 ChimerSeq ChiTaRs ChiTaRs OIP5-AS1-ITGB5 OIP5-AS1 chr15 41578299 ITGB5 chr3 124567376 Exonic hg19 NA DA453768 Out-of-frame Inter-chr q15.1 q21.2 Tumor suppressor gene 122708 ChimerSeq ChiTaRs ChiTaRs ERAL1-ERAL1 ERAL1 chr17 27183553 ERAL1 chr17 27182036 Exonic hg19 NA BP353068 Out-of-frame Intra-chr q11.2 q11.2 122709 ChimerSeq ChiTaRs ChiTaRs ZNF14-NARS ZNF14 chr19 19843479 NARS chr18 55283954 Exonic hg19 NA AW887048 Out-of-frame Inter-chr p13.11 Transcription factor q21.31 122710 ChimerSeq ChiTaRs ChiTaRs C16orf62-EPM2A C16orf62 chr16 19700280 EPM2A chr6 146023935 Exonic hg19 NA BE929838 Out-of-frame Inter-chr p12.3 q24.3 122711 ChimerSeq ChiTaRs ChiTaRs DDX6-C14orf37 DDX6 chr11 118636246 C14orf37 chr14 58760276 Exonic hg19 NA BF085678 Out-of-frame Inter-chr q23.3 q23.1 122712 ChimerSeq ChiTaRs ChiTaRs IFT140-INS-IGF2 IFT140 chr16 1590268 INS-IGF2 chr11 2150697 Exonic hg19 NA BI036278 Out-of-frame Inter-chr p13.3 p15.5 122713 ChimerSeq ChiTaRs ChiTaRs DSCAM-DSCAM DSCAM chr21 41648170 DSCAM chr21 41648162 Exonic hg19 NA BF948548 Out-of-frame Intra-chr q22.2 q22.2 122714 ChimerSeq ChiTaRs ChiTaRs NFATC3-NFATC3 NFATC3 chr16 68225361 NFATC3 chr16 68224770 Exonic hg19 NA CF137418 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Transcription factor 122715 ChimerSeq ChiTaRs ChiTaRs FKBP10-FKBP10 FKBP10 chr17 39978592 FKBP10 chr17 39978954 Exonic hg19 NA BE938578 Out-of-frame Intra-chr q21.2 q21.2 122716 ChimerSeq ChiTaRs ChiTaRs N4BP2L2-N4BP2L2 N4BP2L2 chr13 33099484 N4BP2L2 chr13 33110747 Exonic hg19 NA AU117208 Out-of-frame Intra-chr q13.1 q13.1 122717 ChimerSeq ChiTaRs ChiTaRs ATP5J-APP ATP5J chr21 27107384 APP chr21 27423445 Exonic hg19 NA DA242038 Out-of-frame Intra-chr q21.3 q21.3 122718 ChimerSeq ChiTaRs ChiTaRs CMIP-CMIP CMIP chr16 81744115 CMIP chr16 81743702 Exonic hg19 NA CN255578 Out-of-frame Intra-chr q23.2 q23.2 122719 ChimerSeq ChiTaRs ChiTaRs ARFGAP1-ARFGAP1 ARFGAP1 chr20 61921140 ARFGAP1 chr20 61920923 Exonic hg19 NA AA456448 Out-of-frame Intra-chr q13.33 q13.33 122720 ChimerSeq ChiTaRs ChiTaRs ANKRD13D-ANKRD13D ANKRD13D chr11 67069819 ANKRD13D chr11 67068436 Exonic hg19 NA BI054238 Out-of-frame Intra-chr q13.2 q13.2 122721 ChimerSeq ChiTaRs ChiTaRs INPP5K-FBXO34 INPP5K chr17 1417251 FBXO34 chr14 55819178 Exonic hg19 NA AI309778 Out-of-frame Inter-chr p13.3 q22.3 122722 ChimerSeq ChiTaRs ChiTaRs RPS19-RPS4Y1 RPS19 chr19 42373284 RPS4Y1 chrY 2734859 Exonic hg19 NA AW300778 CDS-5'UTR Inter-chr q13.2 p11.2 122723 ChimerSeq ChiTaRs ChiTaRs MPDU1-MPDU1 MPDU1 chr17 7492080 MPDU1 chr17 7492108 Exonic hg19 NA CN275848 Out-of-frame Intra-chr p13.1 p13.1 122724 ChimerSeq ChiTaRs ChiTaRs GMFG-KDELR1 GMFG chr19 39819706 KDELR1 chr19 48886412 Exonic hg19 NA BQ775128 Out-of-frame Intra-chr q13.2 q13.33 122725 ChimerSeq ChiTaRs ChiTaRs CDH11-MYO15B CDH11 chr16 64988450 MYO15B chr17 73587659 Exonic hg19 NA BF901138 Out-of-frame Inter-chr q21 Oncogene Tumor suppressor gene q25.1 122726 ChimerSeq ChiTaRs ChiTaRs ATF1-ATF1 ATF1 chr12 51214847 ATF1 chr12 51214814 Exonic hg19 NA BM452878 Out-of-frame Intra-chr q13.12 Oncogene Transcription factor q13.12 Oncogene Transcription factor 122727 ChimerSeq ChiTaRs ChiTaRs MED13-MED13 MED13 chr17 60072726 MED13 chr17 60088212 Exonic hg19 NA BE694388 Out-of-frame Intra-chr q23.2 q23.2 122728 ChimerSeq ChiTaRs ChiTaRs SEC23A-SEC23A SEC23A chr14 39502056 SEC23A chr14 39524347 Exonic hg19 NA F00808 Out-of-frame Intra-chr q21.1 q21.1 122729 ChimerSeq ChiTaRs ChiTaRs RPL23-CENPF RPL23 chr17 37006650 CENPF chr1 214819188 Exonic hg19 NA T90988 Out-of-frame Inter-chr q12 q41 122730 ChimerSeq ChiTaRs ChiTaRs LINC00478-LINC00478 LINC00478 chr21 17675491 LINC00478 chr21 17675479 Exonic hg19 NA BF929588 Out-of-frame Intra-chr 122731 ChimerSeq ChiTaRs ChiTaRs TAOK3-TAOK3 TAOK3 chr12 118599639 TAOK3 chr12 118590105 Exonic hg19 NA BF873678 Out-of-frame Intra-chr q24.23 q24.23 122732 ChimerSeq ChiTaRs ChiTaRs MAP2K7-SUPT3H MAP2K7 chr19 7979363 SUPT3H chr6 45307240 Exonic hg19 NA CN277618 3'UTR-CDS Inter-chr p13.2 STE:STE7 p21.1 122733 ChimerSeq ChiTaRs ChiTaRs PHLDA1-PHLDA1 PHLDA1 chr12 76419819 PHLDA1 chr12 76419600 Exonic hg19 NA BE775108 Out-of-frame Intra-chr q21.2 q21.2 122734 ChimerSeq ChiTaRs ChiTaRs KRI1-TMEM40 KRI1 chr19 10672395 TMEM40 chr3 12800973 Exonic hg19 NA BF336708 Out-of-frame Inter-chr p13.2 p25.2 122735 ChimerSeq ChiTaRs ChiTaRs SNX21-CNTN4 SNX21 chr20 44470510 CNTN4 chr3 2149931 Exonic hg19 NA DB309558 Out-of-frame Inter-chr q13.12 p26.3 122736 ChimerSeq ChiTaRs ChiTaRs ZBTB46-MAFB ZBTB46 chr20 62375756 MAFB chr20 39314954 Exonic hg19 NA CD699168 Out-of-frame Intra-chr q13.33 Transcription factor q12 Oncogene Transcription factor 122737 ChimerSeq ChiTaRs ChiTaRs PATZ1-WDR25 PATZ1 chr22 31736936 WDR25 chr14 100995447 Exonic hg19 NA BF939688 Out-of-frame Inter-chr q12.2 Transcription factor q32.2 122738 ChimerSeq ChiTaRs ChiTaRs CASS4-BOLA2 CASS4 chr20 55006663 BOLA2 chr16 30092692 Exonic hg19 NA BG991478 Out-of-frame Inter-chr q13.31 p11.2 122739 ChimerSeq ChiTaRs ChiTaRs APOL3-COL6A3 APOL3 chr22 36537287 COL6A3 chr2 238232843 Exonic hg19 NA AW818488 Out-of-frame Inter-chr q12.3 q37.3 122740 ChimerSeq ChiTaRs ChiTaRs DDX17-DDX17 DDX17 chr22 38880425 DDX17 chr22 38890909 Exonic hg19 NA AW340518 Out-of-frame Intra-chr q13.1 q13.1 122741 ChimerSeq ChiTaRs ChiTaRs ATP9B-ATP9B ATP9B chr18 77122010 ATP9B chr18 77121902 Exonic hg19 NA BQ373598 Out-of-frame Intra-chr 122742 ChimerSeq ChiTaRs ChiTaRs SF3A1-SF3A1 SF3A1 chr22 30742344 SF3A1 chr22 30742375 Exonic hg19 NA BF893728 Out-of-frame Intra-chr q12.2 q12.2 122743 ChimerSeq ChiTaRs ChiTaRs SCAPER-SCAPER SCAPER chr15 76640639 SCAPER chr15 76640641 Exonic hg19 NA AA528738 Out-of-frame Intra-chr q24.3 q24.3 122744 ChimerSeq ChiTaRs ChiTaRs TM9SF4-OSER1 TM9SF4 chr20 30753356 OSER1 chr20 42825552 Exonic hg19 NA BC018328 Out-of-frame Intra-chr q11.21 q13.12 122745 ChimerSeq ChiTaRs ChiTaRs CHD3-PHLPP2 CHD3 chr17 7813235 PHLPP2 chr16 71748414 Exonic hg19 NA BF798228 Out-of-frame Inter-chr p13.1 q22.2 Tumor suppressor gene 122746 ChimerSeq ChiTaRs ChiTaRs TUBB4A-TCF4 TUBB4A chr19 6494383 TCF4 chr18 52896288 Exonic hg19 NA T06068 Out-of-frame Inter-chr p13.3 q21.2 Tumor suppressor gene Transcription factor 122747 ChimerSeq ChiTaRs ChiTaRs TIMP2-TIMP2 TIMP2 chr17 76850718 TIMP2 chr17 76850730 Exonic hg19 NA BF996378 Out-of-frame Intra-chr q25.3 q25.3 122748 ChimerSeq ChiTaRs ChiTaRs UBE2Z-UBE2Z UBE2Z chr17 47005703 UBE2Z chr17 47005705 Exonic hg19 NA H91118 Out-of-frame Intra-chr q21.32 q21.32 122749 ChimerSeq ChiTaRs ChiTaRs NQO1-NQO1 NQO1 chr16 69748955 NQO1 chr16 69744805 Exonic hg19 NA CB159668 Out-of-frame Intra-chr q22.1 q22.1 122750 ChimerSeq ChiTaRs ChiTaRs NIPSNAP1-NIPSNAP1 NIPSNAP1 chr22 29951289 NIPSNAP1 chr22 29950887 Exonic hg19 NA BQ331438 Out-of-frame Intra-chr q12.2 q12.2 122751 ChimerSeq ChiTaRs ChiTaRs GNB1L-GNB1L GNB1L chr22 19837679 GNB1L chr22 19837840 Exonic hg19 NA AA453228 Out-of-frame Intra-chr q11.21 q11.21 122752 ChimerSeq ChiTaRs ChiTaRs EXD2-EXD2 EXD2 chr14 69708187 EXD2 chr14 69701675 Exonic hg19 NA BE694428 Out-of-frame Intra-chr q24.1 q24.1 122753 ChimerSeq ChiTaRs ChiTaRs MYH11-RAB2A MYH11 chr16 15839006 RAB2A chr8 61518762 Exonic hg19 NA AW377018 Out-of-frame Inter-chr Oncogene q12.1 122754 ChimerSeq ChiTaRs ChiTaRs C11orf30-C11orf30 C11orf30 chr11 76238518 C11orf30 chr11 76239057 Exonic hg19 NA AW855518 Out-of-frame Intra-chr 122755 ChimerSeq ChiTaRs ChiTaRs NDE1-TUBGCP3 NDE1 chr16 15808799 TUBGCP3 chr13 113193369 Exonic hg19 NA AW366688 Out-of-frame Inter-chr p13.11 122756 ChimerSeq ChiTaRs ChiTaRs DNAJA4-DNAJA4 DNAJA4 chr15 78571575 DNAJA4 chr15 78571549 Exonic hg19 NA CB851178 Out-of-frame Intra-chr q25.1 q25.1 122757 ChimerSeq ChiTaRs ChiTaRs IGFBP4-IGFBP4 IGFBP4 chr17 38613586 IGFBP4 chr17 38613308 Exonic hg19 NA AI750908 Out-of-frame Intra-chr q21.2 Tumor suppressor gene q21.2 Tumor suppressor gene 122758 ChimerSeq ChiTaRs ChiTaRs TTC39C-TNRC6B TTC39C chr18 21715793 TNRC6B chr22 40452509 Exonic hg19 NA AF363068 Out-of-frame Inter-chr q11.2 q13.1 122759 ChimerSeq ChiTaRs ChiTaRs FERMT2-FERMT2 FERMT2 chr14 53347488 FERMT2 chr14 53349313 Exonic hg19 NA AA702988 Out-of-frame Intra-chr q22.1 q22.1 122760 ChimerSeq ChiTaRs ChiTaRs SRRM2-SRRM2 SRRM2 chr16 2808519 SRRM2 chr16 2815195 Exonic hg19 NA BF062308 Out-of-frame Intra-chr p13.3 p13.3 122761 ChimerSeq ChiTaRs ChiTaRs BRD4-BRD4 BRD4 chr19 15366975 BRD4 chr19 15367801 Exonic hg19 NA AV724498 Out-of-frame Intra-chr p13.12 Atypical:BRD p13.12 Atypical:BRD 122762 ChimerSeq ChiTaRs ChiTaRs CARHSP1-RAVER2 CARHSP1 chr16 8948883 RAVER2 chr1 65298508 Exonic hg19 NA H92728 Out-of-frame Inter-chr p13.2 p31.3 122763 ChimerSeq ChiTaRs ChiTaRs ZNF609-ZNF609 ZNF609 chr15 64967234 ZNF609 chr15 64974919 Exonic hg19 NA AI936738 Out-of-frame Intra-chr q22.31 Transcription factor q22.31 Transcription factor 122764 ChimerSeq ChiTaRs ChiTaRs EPS15L1-PANK2 EPS15L1 chr19 16479592 PANK2 chr20 3903708 Exonic hg19 NA BF354688 Out-of-frame Inter-chr p13.11 p13 122765 ChimerSeq ChiTaRs ChiTaRs SDK2-SDK2 SDK2 chr17 71332181 SDK2 chr17 71331713 Exonic hg19 NA BE298348 Out-of-frame Intra-chr q25.1 q25.1 122766 ChimerSeq ChiTaRs ChiTaRs SIPA1L3-SIPA1L3 SIPA1L3 chr19 38442088 SIPA1L3 chr19 38441784 Exonic hg19 NA AA654988 Out-of-frame Intra-chr q13.13 q13.13 122767 ChimerSeq ChiTaRs ChiTaRs LOC100130987-PDGFRB LOC100130987 chr11 67136359 PDGFRB chr5 149518099 Exonic hg19 NA BF369558 Out-of-frame Inter-chr q32 Oncogene 122768 ChimerSeq ChiTaRs ChiTaRs NMT1-NMT1 NMT1 chr17 43144525 NMT1 chr17 43145167 Exonic hg19 NA Z19488 Out-of-frame Intra-chr q21.31 q21.31 122769 ChimerSeq ChiTaRs ChiTaRs WWOX-WWOX WWOX chr16 78466649 WWOX chr16 79245500 Exonic hg19 NA AY405915 CDS-3'UTR Intra-chr q23.1 Tumor suppressor gene q23.1 Tumor suppressor gene 122770 ChimerSeq ChiTaRs ChiTaRs INSR-INSR INSR chr19 7135102 INSR chr19 7136650 Exonic hg19 NA AI733108 Out-of-frame Intra-chr p13.2 TK:InsR p13.2 TK:InsR 122771 ChimerSeq ChiTaRs ChiTaRs ASCC2-ASCC2 ASCC2 chr22 30198104 ASCC2 chr22 30189649 Exonic hg19 NA BF899598 Out-of-frame Intra-chr q12.2 q12.2 122772 ChimerSeq ChiTaRs ChiTaRs ZNF335-MYO1F ZNF335 chr20 44579145 MYO1F chr19 8616937 Exonic hg19 NA BE145498 Out-of-frame Inter-chr q13.12 Transcription factor p13.2 122773 ChimerSeq ChiTaRs ChiTaRs KRT5-KRT5 KRT5 chr12 52911900 KRT5 chr12 52911758 Exonic hg19 NA BQ352598 Out-of-frame Intra-chr q13.13 q13.13 122774 ChimerSeq ChiTaRs ChiTaRs LGI4-PROX1-AS1 LGI4 chr19 35632111 PROX1-AS1 chr1 214034680 Exonic hg19 NA BF918548 Out-of-frame Inter-chr q13.12 q32.3 Tumor suppressor gene Transcription factor 122775 ChimerSeq ChiTaRs ChiTaRs CKB-CKB CKB chr14 103988402 CKB chr14 103988465 Exonic hg19 NA AI203968 Out-of-frame Intra-chr q32.33 q32.33 122776 ChimerSeq ChiTaRs ChiTaRs FASN-ESR1 FASN chr17 80046976 ESR1 chr6 152265458 Exonic hg19 NA AF172068 Out-of-frame Inter-chr q25.3 q25.1 Oncogene Tumor suppressor gene Transcription factor 122777 ChimerSeq ChiTaRs ChiTaRs C15orf40-ZKSCAN3 C15orf40 chr15 83680363 ZKSCAN3 chr6 28336020 Exonic hg19 NA BC019888 Out-of-frame Inter-chr q25.2 p22.1 Transcription factor 122778 ChimerSeq ChiTaRs ChiTaRs STT3A-PTPN23 STT3A chr11 125490703 PTPN23 chr3 47450292 Exonic hg19 NA BF803158 Out-of-frame Inter-chr q24.2 p21.31 Tumor suppressor gene 122779 ChimerSeq ChiTaRs ChiTaRs POLR2E-POLR2E POLR2E chr19 1093926 POLR2E chr19 1088615 Exonic hg19 NA CB215068 Out-of-frame Intra-chr p13.3 p13.3 122780 ChimerSeq ChiTaRs ChiTaRs SRP68-SRP68 SRP68 chr17 74035648 SRP68 chr17 74035186 Exonic hg19 NA BG119358 Out-of-frame Intra-chr q25.1 q25.1 122781 ChimerSeq ChiTaRs ChiTaRs C16orf58-MYO1D C16orf58 chr16 31510800 MYO1D chr17 30820077 Exonic hg19 NA BQ325478 Out-of-frame Inter-chr p11.2 q11.2 122782 ChimerSeq ChiTaRs ChiTaRs RANBP10-BPIFA1 RANBP10 chr16 67831179 BPIFA1 chr20 31828044 Exonic hg19 NA BF155588 Out-of-frame Inter-chr q22.1 q11.21 122783 ChimerSeq ChiTaRs ChiTaRs MYH10-GAS8 MYH10 chr17 8512604 GAS8 chr16 90096450 Exonic hg19 NA CV360518 Out-of-frame Inter-chr p13.1 q24.3 122784 ChimerSeq ChiTaRs ChiTaRs RNF43-LRPPRC RNF43 chr17 56494971 LRPPRC chr2 44115700 Exonic hg19 NA DA756048 Out-of-frame Inter-chr q22 Oncogene p21 122785 ChimerSeq ChiTaRs ChiTaRs NDRG3-NDRG3 NDRG3 chr20 35309294 NDRG3 chr20 35280344 Exonic hg19 NA CB217678 Out-of-frame Intra-chr q11.23 q11.23 122786 ChimerSeq ChiTaRs ChiTaRs SNAP23-SNAP23 SNAP23 chr15 42825255 SNAP23 chr15 42824748 Exonic hg19 NA BU680438 Out-of-frame Intra-chr q15.1 q15.1 122787 ChimerSeq ChiTaRs ChiTaRs PISD-PISD PISD chr22 32015463 PISD chr22 32017645 Exonic hg19 NA BP321628 Out-of-frame Intra-chr q12.2 q12.2 122788 ChimerSeq ChiTaRs ChiTaRs KREMEN1-OLFM2 KREMEN1 chr22 29540823 OLFM2 chr19 9964762 Exonic hg19 NA BI037428 Out-of-frame Inter-chr q12.1 p13.2 122789 ChimerSeq ChiTaRs ChiTaRs DNAJC3-FAM222B DNAJC3 chr13 96421588 FAM222B chr17 27103819 Exonic hg19 NA BF327158 Out-of-frame Inter-chr q32.1 q11.2 122790 ChimerSeq ChiTaRs ChiTaRs MYH9-CFDP1 MYH9 chr22 36693062 CFDP1 chr16 75339002 Exonic hg19 NA BF815788 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene q23.1 122791 ChimerSeq ChiTaRs ChiTaRs PAFAH1B2-PAFAH1B2 PAFAH1B2 chr11 117027249 PAFAH1B2 chr11 117022690 Exonic hg19 NA BE177628 Out-of-frame Intra-chr q23.3 q23.3 122792 ChimerSeq ChiTaRs ChiTaRs STAU1-STAU1 STAU1 chr20 47730007 STAU1 chr20 47730614 Exonic hg19 NA CD557318 Out-of-frame Intra-chr q13.13 q13.13 122793 ChimerSeq ChiTaRs ChiTaRs CNTD2-CNTD2 CNTD2 chr19 40728221 CNTD2 chr19 40729407 Exonic hg19 NA AA988078 Out-of-frame Intra-chr q13.2 q13.2 122794 ChimerSeq ChiTaRs ChiTaRs CRYAB-GRK5 CRYAB chr11 111781139 GRK5 chr10 121050618 Exonic hg19 NA BF830028 Out-of-frame Inter-chr q23.1 q26.11 122795 ChimerSeq ChiTaRs ChiTaRs MEIS3-TSIX MEIS3 chr19 47906439 TSIX chrX 73046462 Exonic hg19 NA AI952798 Out-of-frame Inter-chr q13.32 Transcription factor q13.2 122796 ChimerSeq ChiTaRs ChiTaRs ANKRD11-ANKRD11 ANKRD11 chr16 89463775 ANKRD11 chr16 89464015 Exonic hg19 NA BF369488 Out-of-frame Intra-chr q24.3 q24.3 122797 ChimerSeq ChiTaRs ChiTaRs PAX9-STXBP5L PAX9 chr14 37146022 STXBP5L chr3 120830700 Exonic hg19 NA BE148668 Out-of-frame Inter-chr q13.3 Transcription factor q13.33 122798 ChimerSeq ChiTaRs ChiTaRs UBE2C-UBE2C UBE2C chr20 44445591 UBE2C chr20 44443085 Exonic hg19 NA AW404348 Out-of-frame Intra-chr q13.12 q13.12 122799 ChimerSeq ChiTaRs ChiTaRs NOVA1-KBTBD8 NOVA1 chr14 27018917 KBTBD8 chr3 67053400 Exonic hg19 NA BF931598 Out-of-frame Inter-chr q12 p14.1 122800 ChimerSeq ChiTaRs ChiTaRs RANGAP1-RANGAP1 RANGAP1 chr22 41650344 RANGAP1 chr22 41653952 Exonic hg19 NA BU527948 Out-of-frame Intra-chr q13.2 q13.2 122801 ChimerSeq ChiTaRs ChiTaRs ITPRIPL2-GGCX ITPRIPL2 chr16 19130736 GGCX chr2 85776967 Exonic hg19 NA L17128 Out-of-frame Inter-chr p12.3 p11.2 122802 ChimerSeq ChiTaRs ChiTaRs BACE2-DNAJB6 BACE2 chr21 42648524 DNAJB6 chr7 157205474 Exonic hg19 NA BE552198 3'UTR-3'UTR Inter-chr q22.2 q36.3 122803 ChimerSeq ChiTaRs ChiTaRs FAM63B-PHAX FAM63B chr15 59117282 PHAX chr5 125960833 Exonic hg19 NA AI766928 Out-of-frame Inter-chr q23.2 122804 ChimerSeq ChiTaRs ChiTaRs ACER1-MLL ACER1 chr19 6309132 MLL chr11 118360392 Exonic hg19 NA AM050805 Out-of-frame Inter-chr p13.3 q23.3 122805 ChimerSeq ChiTaRs ChiTaRs MYO5C-FAM214A MYO5C chr15 52587982 FAM214A chr15 52903791 Exonic hg19 NA DB069118 Out-of-frame Intra-chr q21.2 q21.3 122806 ChimerSeq ChiTaRs ChiTaRs LOC100507217-SMNDC1 LOC100507217 chr15 93432313 SMNDC1 chr10 112058404 Exonic hg19 NA AW835668 Out-of-frame Inter-chr q25.2 122807 ChimerSeq ChiTaRs ChiTaRs NOP10-NOP10 NOP10 chr15 34633995 NOP10 chr15 34633951 Exonic hg19 NA AI934278 Out-of-frame Intra-chr q14 q14 122808 ChimerSeq ChiTaRs ChiTaRs KTN1-MECP2 KTN1 chr14 56079082 MECP2 chrX 153287764 Exonic hg19 NA BF761248 Out-of-frame Inter-chr q22.3 q28 Transcription factor 122809 ChimerSeq ChiTaRs ChiTaRs ATL1-PMPCB ATL1 chr14 51099375 PMPCB chr7 102939038 Exonic hg19 NA AI205138 Out-of-frame Inter-chr q22.1 q22.1 122810 ChimerSeq ChiTaRs ChiTaRs SLC5A2-SLC5A2 SLC5A2 chr16 31501674 SLC5A2 chr16 31501273 Exonic hg19 NA BQ367848 Out-of-frame Intra-chr p11.2 p11.2 122811 ChimerSeq ChiTaRs ChiTaRs CHST11-CLPTM1L CHST11 chr12 105074477 CLPTM1L chr5 1336140 Exonic hg19 NA BF922748 Out-of-frame Inter-chr q23.3 p15.33 122812 ChimerSeq ChiTaRs ChiTaRs THOC1-THOC1 THOC1 chr18 263134 THOC1 chr18 224741 Exonic hg19 NA AA767078 Out-of-frame Intra-chr p11.32 p11.32 122813 ChimerSeq ChiTaRs ChiTaRs FAM134C-FAM134C FAM134C chr17 40731844 FAM134C chr17 40731864 Exonic hg19 NA AW955268 Out-of-frame Intra-chr 122814 ChimerSeq ChiTaRs ChiTaRs PEX5-DENND1C PEX5 chr12 7363775 DENND1C chr19 6468571 Exonic hg19 NA BE696248 Out-of-frame Inter-chr p13.31 p13.3 122815 ChimerSeq ChiTaRs ChiTaRs LINC00483-MAGI1 LINC00483 chr17 48836433 MAGI1 chr3 65764677 Exonic hg19 NA AW753078 Out-of-frame Inter-chr q21.33 Oncogene 122816 ChimerSeq ChiTaRs ChiTaRs SIK3-SIK3 SIK3 chr11 116746130 SIK3 chr11 116744253 Exonic hg19 NA BI050298 Out-of-frame Intra-chr q23.3 q23.3 122817 ChimerSeq ChiTaRs ChiTaRs SMOC1-SBF2 SMOC1 chr14 70373848 SBF2 chr11 10295712 Exonic hg19 NA AI114538 Out-of-frame Inter-chr q24.2 p15.4 122818 ChimerSeq ChiTaRs ChiTaRs MIR548AE2-NDRG4 MIR548AE2 chr16 48308826 NDRG4 chr16 58547251 Exonic hg19 NA BQ292358 Out-of-frame Intra-chr q11.2 q21 Tumor suppressor gene 122819 ChimerSeq ChiTaRs ChiTaRs BEAN1-SAP30BP BEAN1 chr16 66527301 SAP30BP chr17 73663419 Exonic hg19 NA CD624678 Out-of-frame Inter-chr q21 q25.1 122820 ChimerSeq ChiTaRs ChiTaRs SUPT6H-BGN SUPT6H chr17 27028038 BGN chrX 152773754 Exonic hg19 NA BF985568 Out-of-frame Inter-chr q11.2 q28 122821 ChimerSeq ChiTaRs ChiTaRs ARL4D-TSN ARL4D chr17 41477958 TSN chr2 122516291 Exonic hg19 NA AW163818 Out-of-frame Inter-chr q21.31 q14.3 122822 ChimerSeq ChiTaRs ChiTaRs ELL3-FSHR ELL3 chr15 44086241 FSHR chr2 49314220 Exonic hg19 NA BE260618 Out-of-frame Inter-chr q15.3 p16.3 122823 ChimerSeq ChiTaRs ChiTaRs CLEC18A-CLEC18A CLEC18A chr16 70192678 CLEC18A chr16 70193406 Exonic hg19 NA W22578 Out-of-frame Intra-chr q22.1 q22.1 122824 ChimerSeq ChiTaRs ChiTaRs R3HDM2-FTL R3HDM2 chr12 57810707 FTL chr19 49468818 Exonic hg19 NA AF090928 Out-of-frame Inter-chr q13.3 q13.33 122825 ChimerSeq ChiTaRs ChiTaRs IRS2-IRS2 IRS2 chr13 110417619 IRS2 chr13 110433648 Exonic hg19 NA AA479318 Out-of-frame Intra-chr q34 Oncogene q34 Oncogene 122826 ChimerSeq ChiTaRs ChiTaRs CCDC92-CCDC92 CCDC92 chr12 124421308 CCDC92 chr12 124420961 Exonic hg19 NA AW516698 Out-of-frame Intra-chr 122827 ChimerSeq ChiTaRs ChiTaRs RPN2-RPN2 RPN2 chr20 35857132 RPN2 chr20 35857114 Exonic hg19 NA BG390108 Out-of-frame Intra-chr q11.23 q11.23 122828 ChimerSeq ChiTaRs ChiTaRs EIF3D-PSMD13 EIF3D chr22 36916733 PSMD13 chr11 252820 Exonic hg19 NA BF768948 Out-of-frame Inter-chr q12.3 p15.5 122829 ChimerSeq ChiTaRs ChiTaRs CLK3-ZSWIM7 CLK3 chr15 74917357 ZSWIM7 chr17 15881041 Exonic hg19 NA BI859068 Out-of-frame Inter-chr q24.1 CMGC:CLK p12 122830 ChimerSeq ChiTaRs ChiTaRs TBCB-B3GALNT1 TBCB chr19 36611637 B3GALNT1 chr3 160804308 Exonic hg19 NA DA235308 Out-of-frame Inter-chr q13.12 q26.1 122831 ChimerSeq ChiTaRs ChiTaRs GNB3-GNB3 GNB3 chr12 6956557 GNB3 chr12 6956204 Exonic hg19 NA BU734248 3'UTR-CDS Intra-chr p13.31 p13.31 122832 ChimerSeq ChiTaRs ChiTaRs PIGT-CUX2 PIGT chr20 44053175 CUX2 chr12 111744901 Exonic hg19 NA BE773038 Out-of-frame Inter-chr q13.12 q24.11 Transcription factor 122833 ChimerSeq ChiTaRs ChiTaRs NEDD4L-NEDD4L NEDD4L chr18 56067898 NEDD4L chr18 56067902 Exonic hg19 NA AL121228 Out-of-frame Intra-chr q21.31 Tumor suppressor gene q21.31 Tumor suppressor gene 122834 ChimerSeq ChiTaRs ChiTaRs RRBP1-RRBP1 RRBP1 chr20 17641036 RRBP1 chr20 17596132 Exonic hg19 NA CB048558 Out-of-frame Intra-chr p12.1 p12.1 122835 ChimerSeq ChiTaRs ChiTaRs SUOX-SUOX SUOX chr12 56399309 SUOX chr12 56398944 Exonic hg19 NA BF196408 3'UTR-3'UTR Intra-chr q13.2 q13.2 122836 ChimerSeq ChiTaRs ChiTaRs DUSP3-PABPC4 DUSP3 chr17 41846747 PABPC4 chr1 40038095 Exonic hg19 NA BE818228 Out-of-frame Inter-chr q21.31 p34.3 122837 ChimerSeq ChiTaRs ChiTaRs KRT10-KRT10 KRT10 chr17 38974467 KRT10 chr17 38974369 Exonic hg19 NA BM967028 Out-of-frame Intra-chr q21.2 q21.2 122838 ChimerSeq ChiTaRs ChiTaRs TP53-OSBPL10 TP53 chr17 7573268 OSBPL10 chr3 31964262 Exonic hg19 NA AA947588 Out-of-frame Inter-chr p13.1 Oncogene Tumor suppressor gene Transcription factor p22.3 122839 ChimerSeq ChiTaRs ChiTaRs LPCAT2-LPCAT2 LPCAT2 chr16 55620127 LPCAT2 chr16 55619706 Exonic hg19 NA AA602968 Out-of-frame Intra-chr q12.2 q12.2 122840 ChimerSeq ChiTaRs ChiTaRs TUG1-SNX22 TUG1 chr22 31373916 SNX22 chr15 64448016 Exonic hg19 NA AI110588 Out-of-frame Inter-chr q12.2 q22.31 122841 ChimerSeq ChiTaRs ChiTaRs MAPKAPK5-MAPKAPK5 MAPKAPK5 chr12 112327885 MAPKAPK5 chr12 112326778 Exonic hg19 NA BE169498 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 CAMK:MAPKAPK 122842 ChimerSeq ChiTaRs ChiTaRs RAB1B-NFKBIZ RAB1B chr11 66044064 NFKBIZ chr3 101575917 Exonic hg19 NA AF121168 Out-of-frame Inter-chr q13.2 q12.3 122843 ChimerSeq ChiTaRs ChiTaRs ATP5J-TADA3 ATP5J chr21 27101993 TADA3 chr3 9825880 Exonic hg19 NA AA977788 Out-of-frame Inter-chr q21.3 p25.3 122844 ChimerSeq ChiTaRs ChiTaRs NEAT1-CHD8 NEAT1 chr11 65193888 CHD8 chr14 21860878 Exonic hg19 NA BF351558 Out-of-frame Inter-chr q13.1 q11.2 122845 ChimerSeq ChiTaRs ChiTaRs GAS7-GABRE GAS7 chr17 10065116 GABRE chrX 151142502 Exonic hg19 NA CV404858 Out-of-frame Inter-chr p13.1 q28 122846 ChimerSeq ChiTaRs ChiTaRs THBS1-AKAP2 THBS1 chr15 39888069 AKAP2 chr9 112719092 Exonic hg19 NA BE093698 Out-of-frame Inter-chr q14 Oncogene Tumor suppressor gene q31.3 122847 ChimerSeq ChiTaRs ChiTaRs FLT1-CTNND1 FLT1 chr13 28964208 CTNND1 chr11 57545474 Exonic hg19 NA BF351098 Out-of-frame Inter-chr q12.3 TK:VEGFR Oncogene q12.1 Tumor suppressor gene 122848 ChimerSeq ChiTaRs ChiTaRs UQCRC2-UQCRC2 UQCRC2 chr16 21967008 UQCRC2 chr16 21966954 Exonic hg19 NA BE148688 Out-of-frame Intra-chr 122849 ChimerSeq ChiTaRs ChiTaRs RNF114-RNF114 RNF114 chr20 48569241 RNF114 chr20 48552936 Exonic hg19 NA BP351618 Out-of-frame Intra-chr q13.13 q13.13 122850 ChimerSeq ChiTaRs ChiTaRs CCNE1-HIGD1A CCNE1 chr19 30315218 HIGD1A chr3 42842449 Exonic hg19 NA AA866138 Out-of-frame Inter-chr q12 Oncogene p22.1 122851 ChimerSeq ChiTaRs ChiTaRs SRRM2-SRRM2 SRRM2 chr16 2808521 SRRM2 chr16 2806505 Exonic hg19 NA BX647088 Out-of-frame Intra-chr p13.3 p13.3 122852 ChimerSeq ChiTaRs ChiTaRs RALY-RALY RALY chr20 32665051 RALY chr20 32665033 Exonic hg19 NA BE937778 Out-of-frame Intra-chr q11.22 q11.22 122853 ChimerSeq ChiTaRs ChiTaRs WSB2-WSB2 WSB2 chr12 118478645 WSB2 chr12 118476691 Exonic hg19 NA AY129018 Out-of-frame Intra-chr q24.23 q24.23 122854 ChimerSeq ChiTaRs ChiTaRs CFL1-CFL1 CFL1 chr11 65623441 CFL1 chr11 65623591 Exonic hg19 NA CN291748 Out-of-frame Intra-chr q13.1 q13.1 122855 ChimerSeq ChiTaRs ChiTaRs VPS39-VPS39 VPS39 chr15 42451747 VPS39 chr15 42451257 Exonic hg19 NA BE816198 Out-of-frame Intra-chr q15.1 q15.1 122856 ChimerSeq ChiTaRs ChiTaRs ZFP106-TNPO1 ZFP106 chr15 42707760 TNPO1 chr5 72185092 Exonic hg19 NA BE701928 Out-of-frame Inter-chr q13.2 122857 ChimerSeq ChiTaRs ChiTaRs ATCAY-ATCAY ATCAY chr19 3924891 ATCAY chr19 3924865 Exonic hg19 NA BF527108 Out-of-frame Intra-chr p13.3 p13.3 122858 ChimerSeq ChiTaRs ChiTaRs ZACN-ALG3 ZACN chr17 74078064 ALG3 chr3 183960723 Exonic hg19 NA BF916298 Out-of-frame Inter-chr q25.1 q27.1 122859 ChimerSeq ChiTaRs ChiTaRs DLGAP1-GNL2 DLGAP1 chr18 4218105 GNL2 chr1 38033333 Exonic hg19 NA BF930028 Out-of-frame Inter-chr p11.31 p34.3 122860 ChimerSeq ChiTaRs ChiTaRs STON2-TNS1 STON2 chr14 81876646 TNS1 chr2 218668521 Exonic hg19 NA AK024948 Out-of-frame Inter-chr q31.1 q35 122861 ChimerSeq ChiTaRs ChiTaRs MIR548AE2-MIR548AE2 MIR548AE2 chr16 48396308 MIR548AE2 chr16 48395620 Exonic hg19 NA AW390258 Out-of-frame Intra-chr q11.2 q11.2 122862 ChimerSeq ChiTaRs ChiTaRs AACS-FBN1 AACS chr12 125591751 FBN1 chr15 48807741 Exonic hg19 NA BF993118 Out-of-frame Inter-chr q24.31 q21.1 122863 ChimerSeq ChiTaRs ChiTaRs LENG8-LENG8 LENG8 chr19 54969136 LENG8 chr19 54969142 Exonic hg19 NA BF952148 Out-of-frame Intra-chr 122864 ChimerSeq ChiTaRs ChiTaRs UBC-SLC23A2 UBC chr12 125398278 SLC23A2 chr20 4833041 Exonic hg19 NA BF805458 Out-of-frame Inter-chr q24.31 p13 122865 ChimerSeq ChiTaRs ChiTaRs VPS26B-VPS26B VPS26B chr11 134116800 VPS26B chr11 134116806 Exonic hg19 NA BI013828 Out-of-frame Intra-chr q25 q25 122866 ChimerSeq ChiTaRs ChiTaRs EIF2AK4-EIF2AK4 EIF2AK4 chr15 40266278 EIF2AK4 chr15 40266142 Exonic hg19 NA AA230218 Out-of-frame Intra-chr q15.1 q15.1 122867 ChimerSeq ChiTaRs ChiTaRs KLHL22-RBL1 KLHL22 chr22 20837088 RBL1 chr20 35662334 Exonic hg19 NA CD520258 Out-of-frame Inter-chr q11.21 q11.23 Tumor suppressor gene 122868 ChimerSeq ChiTaRs ChiTaRs DAZAP2-TCF4 DAZAP2 chr12 51637568 TCF4 chr18 52893102 Exonic hg19 NA CB217268 Out-of-frame Inter-chr q13.13 q21.2 Tumor suppressor gene Transcription factor 122869 ChimerSeq ChiTaRs ChiTaRs CHRNA7-DKFZP434L187 CHRNA7 chr15 32461782 DKFZP434L187 chr15 30653371 Exonic hg19 NA AA668338 Out-of-frame Intra-chr q13.3 122870 ChimerSeq ChiTaRs ChiTaRs TBC1D17-LGALS3 TBC1D17 chr19 50388475 LGALS3 chr14 55597501 Exonic hg19 NA BF754368 Out-of-frame Inter-chr q13.33 q22.3 122871 ChimerSeq ChiTaRs ChiTaRs SNRPF-TRIM28 SNRPF chr12 96259909 TRIM28 chr19 59062017 Exonic hg19 NA BU564668 Out-of-frame Inter-chr q23.1 q13.43 122872 ChimerSeq ChiTaRs ChiTaRs ABCA8-HMGCS1 ABCA8 chr17 66863593 HMGCS1 chr5 43308876 Exonic hg19 NA BF476718 Out-of-frame Inter-chr q24.2 p12 122873 ChimerSeq ChiTaRs ChiTaRs MFGE8-UGP2 MFGE8 chr15 89442382 UGP2 chr2 64093815 Exonic hg19 NA CA314258 Out-of-frame Inter-chr q26.1 p15 122874 ChimerSeq ChiTaRs ChiTaRs DAAM1-DAAM1 DAAM1 chr14 59656905 DAAM1 chr14 59656419 Exonic hg19 NA BF762998 Out-of-frame Intra-chr q23.1 q23.1 122875 ChimerSeq ChiTaRs ChiTaRs PTPN9-TOR1AIP2 PTPN9 chr15 75767662 TOR1AIP2 chr1 179831580 Exonic hg19 NA AK126088 Out-of-frame Inter-chr q24.2 q25.2 122876 ChimerSeq ChiTaRs ChiTaRs B2M-B2M B2M chr15 45010273 B2M chr15 45010240 Exonic hg19 NA BI092058 Out-of-frame Intra-chr Oncogene Oncogene 122877 ChimerSeq ChiTaRs ChiTaRs MSL1-MSL1 MSL1 chr17 38286488 MSL1 chr17 38286485 Exonic hg19 NA AA558238 Out-of-frame Intra-chr q21.1 q21.1 122878 ChimerSeq ChiTaRs ChiTaRs TNFAIP1-RBM6 TNFAIP1 chr17 26671520 RBM6 chr3 50099344 Exonic hg19 NA BG010508 Out-of-frame Inter-chr q11.2 p21.31 Tumor suppressor gene 122879 ChimerSeq ChiTaRs ChiTaRs ATRN-GIGYF2 ATRN chr20 3628372 GIGYF2 chr2 233655492 Exonic hg19 NA AA367938 Out-of-frame Inter-chr p13 q37.1 122880 ChimerSeq ChiTaRs ChiTaRs RAI1-SREBF1 RAI1 chr17 17721040 SREBF1 chr17 17720412 Exonic hg19 NA BM975798 Out-of-frame Intra-chr p11.2 p11.2 Transcription factor 122881 ChimerSeq ChiTaRs ChiTaRs NCOA5-PDGFC NCOA5 chr20 44705634 PDGFC chr4 157796994 Exonic hg19 NA AV719328 Out-of-frame Inter-chr q13.12 Tumor suppressor gene q32.1 122882 ChimerSeq ChiTaRs ChiTaRs UBA52-NDE1 UBA52 chr19 18686042 NDE1 chr16 15797350 Exonic hg19 NA BQ016698 Out-of-frame Inter-chr p13.11 p13.11 122883 ChimerSeq ChiTaRs ChiTaRs MYH9-C20orf96 MYH9 chr22 36696243 C20orf96 chr20 259930 Exonic hg19 NA BQ335488 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene p13 122884 ChimerSeq ChiTaRs ChiTaRs TEF-TEF TEF chr22 41794833 TEF chr22 41783648 Exonic hg19 NA BG432348 Out-of-frame Intra-chr q13.2 Transcription factor q13.2 Transcription factor 122885 ChimerSeq ChiTaRs ChiTaRs ZFP14-GNB1 ZFP14 chr19 36827511 GNB1 chr1 1751288 Exonic hg19 NA H53458 Out-of-frame Inter-chr q13.12 Transcription factor p36.33 122886 ChimerSeq ChiTaRs ChiTaRs RPL36-IGFBP5 RPL36 chr19 5691678 IGFBP5 chr2 217541449 Exonic hg19 NA AI497618 3'UTR-3'UTR Inter-chr p13.3 q35 Tumor suppressor gene 122887 ChimerSeq ChiTaRs ChiTaRs MEG3-MEG3 MEG3 chr14 101316261 MEG3 chr14 101318798 Exonic hg19 NA AI963928 Out-of-frame Intra-chr q32.2 Tumor suppressor gene q32.2 Tumor suppressor gene 122888 ChimerSeq ChiTaRs ChiTaRs ABCC1-ABCC1 ABCC1 chr16 16117237 ABCC1 chr16 16124973 Exonic hg19 NA BF836418 Out-of-frame Intra-chr 122889 ChimerSeq ChiTaRs ChiTaRs TMEM120B-TMEM120B TMEM120B chr12 122204053 TMEM120B chr12 122203611 Exonic hg19 NA BF326308 Out-of-frame Intra-chr q24.31 q24.31 122890 ChimerSeq ChiTaRs ChiTaRs LUC7L-LUC7L LUC7L chr16 277851 LUC7L chr16 277775 Exonic hg19 NA BE171438 Out-of-frame Intra-chr p13.3 p13.3 122891 ChimerSeq ChiTaRs ChiTaRs FUS-PSMB7 FUS chr16 31202926 PSMB7 chr9 127116963 Exonic hg19 NA AW449088 Out-of-frame Inter-chr p11.2 Tumor suppressor gene q33.3 122892 ChimerSeq ChiTaRs ChiTaRs GNPTAB-GNPTAB GNPTAB chr12 102139497 GNPTAB chr12 102139472 Exonic hg19 NA CA503168 Out-of-frame Intra-chr q23.2 q23.2 122893 ChimerSeq ChiTaRs ChiTaRs FTL-FTL FTL chr19 49468646 FTL chr19 49468720 Exonic hg19 NA BQ347518 Out-of-frame Intra-chr q13.33 q13.33 122894 ChimerSeq ChiTaRs ChiTaRs KIAA0556-KIAA0556 KIAA0556 chr16 27642434 KIAA0556 chr16 27642463 Exonic hg19 NA BF354268 Out-of-frame Intra-chr p12.1 p12.1 122895 ChimerSeq ChiTaRs ChiTaRs ESYT1-ESYT1 ESYT1 chr12 56526585 ESYT1 chr12 56527411 Exonic hg19 NA BF753098 Out-of-frame Intra-chr q13.2 q13.2 122896 ChimerSeq ChiTaRs ChiTaRs GUCY1A2-MALAT1 GUCY1A2 chr11 106722440 MALAT1 chr11 65266737 Exonic hg19 NA BG000658 Out-of-frame Intra-chr q22.3 Oncogene q13.1 122897 ChimerSeq ChiTaRs ChiTaRs ELL3-ELL3 ELL3 chr15 44086877 ELL3 chr15 44086890 Exonic hg19 NA N31198 Out-of-frame Intra-chr q15.3 q15.3 122898 ChimerSeq ChiTaRs ChiTaRs CCDC137-CCDC137 CCDC137 chr17 79638480 CCDC137 chr17 79637791 Exonic hg19 NA BM041288 Out-of-frame Intra-chr q25.3 q25.3 122899 ChimerSeq ChiTaRs ChiTaRs TIMELESS-RPS15 TIMELESS chr12 56813723 RPS15 chr19 1440425 Exonic hg19 NA H38868 Out-of-frame Inter-chr q13.3 p13.3 122900 ChimerSeq ChiTaRs ChiTaRs RCOR2-RCOR2 RCOR2 chr11 63681661 RCOR2 chr11 63678706 Exonic hg19 NA BC010608 Out-of-frame Intra-chr q13.1 q13.1 122901 ChimerSeq ChiTaRs ChiTaRs TSPAN16-EP300 TSPAN16 chr19 11435261 EP300 chr22 41573606 Exonic hg19 NA AL044228 Out-of-frame Inter-chr p13.2 q13.2 Oncogene 122902 ChimerSeq ChiTaRs ChiTaRs FOS-FOS FOS chr14 75748367 FOS chr14 75747739 Exonic hg19 NA BP215108 Out-of-frame Intra-chr q24.3 Transcription factor q24.3 Transcription factor 122903 ChimerSeq ChiTaRs ChiTaRs ETV4-EDIL3 ETV4 chr17 41606105 EDIL3 chr5 83413098 Exonic hg19 NA BF698228 Out-of-frame Inter-chr q21.31 Oncogene Transcription factor q14.3 122904 ChimerSeq ChiTaRs ChiTaRs EXD1-RFWD2 EXD1 chr15 41478381 RFWD2 chr1 176054914 Exonic hg19 NA DA687098 Out-of-frame Inter-chr q15.1 q25.2 Tumor suppressor gene 122905 ChimerSeq ChiTaRs ChiTaRs ZNF544-ZNF544 ZNF544 chr19 58758123 ZNF544 chr19 58758136 Exonic hg19 NA BF366268 Out-of-frame Intra-chr q13.43 Transcription factor q13.43 Transcription factor 122906 ChimerSeq ChiTaRs ChiTaRs CPM-TLE1 CPM chr12 69315808 TLE1 chr9 84295943 Exonic hg19 NA BG006748 Out-of-frame Inter-chr q15 q21.32 122907 ChimerSeq ChiTaRs ChiTaRs TSPAN8-HDAC9 TSPAN8 chr12 71556169 HDAC9 chr7 18876350 Exonic hg19 NA CV427378 Out-of-frame Inter-chr q21.1 p21.1 122908 ChimerSeq ChiTaRs ChiTaRs DYNC1H1-SLAIN2 DYNC1H1 chr14 102500781 SLAIN2 chr4 48397588 Exonic hg19 NA BI014058 Out-of-frame Inter-chr q32.31 p11 122909 ChimerSeq ChiTaRs ChiTaRs SCFD1-MLLT3 SCFD1 chr14 31091789 MLLT3 chr9 20549656 Exonic hg19 NA BG185378 Out-of-frame Inter-chr q12 p21.3 122910 ChimerSeq ChiTaRs ChiTaRs IGF1R-IGF1R IGF1R chr15 99212323 IGF1R chr15 99212127 Exonic hg19 NA BF370698 Out-of-frame Intra-chr q26.3 TK:InsR Oncogene q26.3 TK:InsR Oncogene 122911 ChimerSeq ChiTaRs ChiTaRs BOLA2-YTHDF3 BOLA2 chr16 29676827 YTHDF3 chr8 64100185 Exonic hg19 NA J04168 Out-of-frame Inter-chr p11.2 q12.3 122912 ChimerSeq ChiTaRs ChiTaRs HOXB3-HOXB3 HOXB3 chr17 46658227 HOXB3 chr17 46657885 Exonic hg19 NA AA904228 Out-of-frame Intra-chr q21.32 Transcription factor q21.32 Transcription factor 122913 ChimerSeq ChiTaRs ChiTaRs ITGA3-ZDHHC2 ITGA3 chr17 48167845 ZDHHC2 chr8 17056337 Exonic hg19 NA CA422988 Out-of-frame Inter-chr q21.33 p22 Tumor suppressor gene 122914 ChimerSeq ChiTaRs ChiTaRs ZNF343-NCOA6 ZNF343 chr20 2505149 NCOA6 chr20 33302866 Exonic hg19 NA BF572568 Out-of-frame Intra-chr p13 Transcription factor q11.22 122915 ChimerSeq ChiTaRs ChiTaRs LILRA2-RAB11B LILRA2 chr19 55106725 RAB11B chr19 8467394 Exonic hg19 NA EL583048 Out-of-frame Intra-chr p13.2 122916 ChimerSeq ChiTaRs ChiTaRs MAN2C1-CORO2A MAN2C1 chr15 75648504 CORO2A chr9 100897545 Exonic hg19 NA DB345218 Out-of-frame Inter-chr q24.2 q22.33 122917 ChimerSeq ChiTaRs ChiTaRs CENPV-PDCD2L CENPV chr17 16246100 PDCD2L chr19 34916942 Exonic hg19 NA BM804118 Out-of-frame Inter-chr p11.2 q13.11 122918 ChimerSeq ChiTaRs ChiTaRs SAMD14-LARP1 SAMD14 chr17 48191603 LARP1 chr5 154182387 Exonic hg19 NA BF507768 Out-of-frame Inter-chr q21.33 q33.2 122919 ChimerSeq ChiTaRs ChiTaRs TLE2-TLE2 TLE2 chr19 3013799 TLE2 chr19 2997702 Exonic hg19 NA BI046568 Out-of-frame Intra-chr p13.3 p13.3 122920 ChimerSeq ChiTaRs ChiTaRs SRRM2-DPYD SRRM2 chr16 2804796 DPYD chr1 98322148 Exonic hg19 NA CV375938 Out-of-frame Inter-chr p13.3 p21.3 Oncogene 122921 ChimerSeq ChiTaRs ChiTaRs LIG3-FLOT1 LIG3 chr17 33310499 FLOT1 chr6 2041283 Exonic hg19 NA BF900318 Out-of-frame Inter-chr q12 Tumor suppressor gene 122922 ChimerSeq ChiTaRs ChiTaRs HOXB9-RPL26 HOXB9 chr17 46700001 RPL26 chr17 8285536 Exonic hg19 NA BF812918 Out-of-frame Intra-chr q21.32 Transcription factor p13.1 122923 ChimerSeq ChiTaRs ChiTaRs CENPV-ATXN7 CENPV chr17 16251195 ATXN7 chr3 63968651 Exonic hg19 NA BG150438 Out-of-frame Inter-chr p11.2 p14.1 122924 ChimerSeq ChiTaRs ChiTaRs MCAM-CELF2 MCAM chr11 119179712 CELF2 chr10 11317203 Exonic hg19 NA AW897878 Out-of-frame Inter-chr q23.3 p14 122925 ChimerSeq ChiTaRs ChiTaRs SPTLC2-SPTLC2 SPTLC2 chr14 77987860 SPTLC2 chr14 77978648 Exonic hg19 NA AW376098 Out-of-frame Intra-chr q24.3 q24.3 122926 ChimerSeq ChiTaRs ChiTaRs ZNF407-ATG7 ZNF407 chr18 72344179 ATG7 chr3 11484401 Exonic hg19 NA BF371118 Out-of-frame Inter-chr q22.3 Transcription factor p25.3 122927 ChimerSeq ChiTaRs ChiTaRs EPB41L1-GSTM2 EPB41L1 chr20 34819503 GSTM2 chr1 110210975 Exonic hg19 NA BI006168 Out-of-frame Inter-chr q11.23 p13.3 122928 ChimerSeq ChiTaRs ChiTaRs B2M-B2M B2M chr15 45010285 B2M chr15 45003712 Exonic hg19 NA AW394168 Out-of-frame Intra-chr Oncogene Oncogene 122929 ChimerSeq ChiTaRs ChiTaRs ALKBH8-ALKBH8 ALKBH8 chr11 107375681 ALKBH8 chr11 107373755 Exonic hg19 NA DB315008 Out-of-frame Intra-chr q22.3 q22.3 122930 ChimerSeq ChiTaRs ChiTaRs LMO7-MUC4 LMO7 chr13 76432149 MUC4 chr3 195530516 Exonic hg19 NA AW391858 Out-of-frame Inter-chr q22.2 122931 ChimerSeq ChiTaRs ChiTaRs ATP6V0D1-FABP7 ATP6V0D1 chr16 67472228 FABP7 chr6 123105015 Exonic hg19 NA BM986848 Out-of-frame Inter-chr q22.1 q22.31 122932 ChimerSeq ChiTaRs ChiTaRs OS9-OS9 OS9 chr12 58109938 OS9 chr12 58088553 Exonic hg19 NA BI012638 Out-of-frame Intra-chr q13.3 q13.3 122933 ChimerSeq ChiTaRs ChiTaRs VPS29-VPS29 VPS29 chr12 110930911 VPS29 chr12 110929430 Exonic hg19 NA AA401048 Out-of-frame Intra-chr q24.11 q24.11 122934 ChimerSeq ChiTaRs ChiTaRs MALAT1-FKBP15 MALAT1 chr11 65267607 FKBP15 chr9 116029644 Exonic hg19 NA BQ777358 Out-of-frame Inter-chr q13.1 q32 122935 ChimerSeq ChiTaRs ChiTaRs ASGR1-ASGR1 ASGR1 chr17 7082655 ASGR1 chr17 7076785 Exonic hg19 NA M10058 Out-of-frame Intra-chr p13.1 p13.1 122936 ChimerSeq ChiTaRs ChiTaRs BRD7-BRD7 BRD7 chr16 50368762 BRD7 chr16 50402025 Exonic hg19 NA W26848 Out-of-frame Intra-chr q12.1 Tumor suppressor gene q12.1 Tumor suppressor gene 122937 ChimerSeq ChiTaRs ChiTaRs SMTN-CHI3L1 SMTN chr22 31478179 CHI3L1 chr1 203148168 Exonic hg19 NA AV707858 Out-of-frame Inter-chr q12.2 q32.1 122938 ChimerSeq ChiTaRs ChiTaRs SPG7-SPG7 SPG7 chr16 89589690 SPG7 chr16 89589249 Exonic hg19 NA BE089508 Out-of-frame Intra-chr q24.3 q24.3 122939 ChimerSeq ChiTaRs ChiTaRs RGMA-KCTD10 RGMA chr15 93586993 KCTD10 chr12 109888315 Exonic hg19 NA AW237208 Out-of-frame Inter-chr q26.1 q24.11 122940 ChimerSeq ChiTaRs ChiTaRs RHOT1-ANKRD20A5P RHOT1 chr17 30501200 ANKRD20A5P chr18 14222183 Exonic hg19 NA BG996638 Out-of-frame Inter-chr q11.2 p11.21 122941 ChimerSeq ChiTaRs ChiTaRs DGCR5-DGCR5 DGCR5 chr22 18958133 DGCR5 chr22 18958142 Exonic hg19 NA X91348 Out-of-frame Intra-chr q11.21 q11.21 122942 ChimerSeq ChiTaRs ChiTaRs SNPH-CYTH1 SNPH chr20 1254966 CYTH1 chr17 76694721 Exonic hg19 NA AW897918 Out-of-frame Inter-chr p13 q25.3 122943 ChimerSeq ChiTaRs ChiTaRs PER1-GAS5 PER1 chr17 8054164 GAS5 chr1 173834242 Exonic hg19 NA BC072458 Out-of-frame Inter-chr p13.1 Oncogene q25.1 Tumor suppressor gene 122944 ChimerSeq ChiTaRs ChiTaRs ZFHX3-AHNAK ZFHX3 chr16 72886794 AHNAK chr11 62291491 Exonic hg19 NA BG952428 Out-of-frame Inter-chr q22.3 Tumor suppressor gene Transcription factor q12.3 Tumor suppressor gene 122945 ChimerSeq ChiTaRs ChiTaRs MPG-ENTPD6 MPG chr16 135401 ENTPD6 chr20 25187280 Exonic hg19 NA EL584048 Out-of-frame Inter-chr p13.3 p11.21 122946 ChimerSeq ChiTaRs ChiTaRs IGF1R-RHOT2 IGF1R chr15 99371506 RHOT2 chr16 721090 Exonic hg19 NA BQ068718 Out-of-frame Inter-chr q26.3 TK:InsR Oncogene p13.3 122947 ChimerSeq ChiTaRs ChiTaRs CMIP-KIAA1984 CMIP chr16 81734598 KIAA1984 chr9 139698560 Exonic hg19 NA BI045628 Out-of-frame Inter-chr q23.2 122948 ChimerSeq ChiTaRs ChiTaRs PAXBP1-OR51E2 PAXBP1 chr21 34123782 OR51E2 chr11 4710533 Exonic hg19 NA AW948948 Out-of-frame Inter-chr p15.4 122949 ChimerSeq ChiTaRs ChiTaRs EIF3L-EIF3L EIF3L chr22 38284512 EIF3L chr22 38284496 Exonic hg19 NA AW022788 Out-of-frame Intra-chr q13.1 q13.1 122950 ChimerSeq ChiTaRs ChiTaRs DLG2-RALGPS2 DLG2 chr11 83485283 RALGPS2 chr1 178833148 Exonic hg19 NA CV356198 Out-of-frame Inter-chr q14.1 q25.2 122951 ChimerSeq ChiTaRs ChiTaRs ZSWIM4-FN3KRP ZSWIM4 chr19 13930258 FN3KRP chr17 80676134 Exonic hg19 NA BF852708 Out-of-frame Inter-chr p13.13 q25.3 122952 ChimerSeq ChiTaRs ChiTaRs SRP68-NEAT1 SRP68 chr17 74068473 NEAT1 chr11 65190541 Exonic hg19 NA BG005598 Out-of-frame Inter-chr q25.1 q13.1 122953 ChimerSeq ChiTaRs ChiTaRs DYNC1H1-ATP1A2 DYNC1H1 chr14 102499830 ATP1A2 chr1 160100320 Exonic hg19 NA BI033138 Out-of-frame Inter-chr q32.31 q23.2 122954 ChimerSeq ChiTaRs ChiTaRs PHLDB1-PHLDB1 PHLDB1 chr11 118516345 PHLDB1 chr11 118508359 Exonic hg19 NA AA330088 Out-of-frame Intra-chr q23.3 q23.3 122955 ChimerSeq ChiTaRs ChiTaRs WDR88-ZNF592 WDR88 chr19 33651465 ZNF592 chr15 85326519 Exonic hg19 NA BQ339888 Out-of-frame Inter-chr q13.11 q25.3 Transcription factor 122956 ChimerSeq ChiTaRs ChiTaRs CEP112-CCDC109B CEP112 chr17 63684796 CCDC109B chr4 110580157 Exonic hg19 NA BM696908 Out-of-frame Inter-chr q24.1 122957 ChimerSeq ChiTaRs ChiTaRs HSP90B1-HSP90B1 HSP90B1 chr12 104335466 HSP90B1 chr12 104336375 Exonic hg19 NA CV356218 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene 122958 ChimerSeq ChiTaRs ChiTaRs INPPL1-INPPL1 INPPL1 chr11 71949677 INPPL1 chr11 71946193 Exonic hg19 NA BG991798 Out-of-frame Intra-chr q13.4 q13.4 122959 ChimerSeq ChiTaRs ChiTaRs SART3-GTF3A SART3 chr12 108916675 GTF3A chr13 28004700 Exonic hg19 NA BU686098 Out-of-frame Inter-chr q23.3 q12.2 Transcription factor 122960 ChimerSeq ChiTaRs ChiTaRs ZNF532-ZNF532 ZNF532 chr18 56541975 ZNF532 chr18 56541203 Exonic hg19 NA CV407788 Out-of-frame Intra-chr q21.32 Transcription factor q21.32 Transcription factor 122961 ChimerSeq ChiTaRs ChiTaRs TCL1A-TCL1A TCL1A chr14 96176648 TCL1A chr14 96176746 Exonic hg19 NA AA417758 Out-of-frame Intra-chr q32.13 Oncogene q32.13 Oncogene 122962 ChimerSeq ChiTaRs ChiTaRs TAGLN-TAGLN TAGLN chr11 117074626 TAGLN chr11 117075085 Exonic hg19 NA BF997718 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene 122963 ChimerSeq ChiTaRs ChiTaRs MUC16-SCUBE3 MUC16 chr19 8969304 SCUBE3 chr6 35197380 Exonic hg19 NA BI013178 Out-of-frame Inter-chr p13.2 p21.31 122964 ChimerSeq ChiTaRs ChiTaRs LRRK2-LRRK2 LRRK2 chr12 40737412 LRRK2 chr12 40724937 Exonic hg19 NA BX098168 Out-of-frame Intra-chr q12 TKL:LRRK q12 TKL:LRRK 122965 ChimerSeq ChiTaRs ChiTaRs FOS-FOS FOS chr14 75746257 FOS chr14 75746248 Exonic hg19 NA BI046238 Out-of-frame Intra-chr q24.3 Transcription factor q24.3 Transcription factor 122966 ChimerSeq ChiTaRs ChiTaRs EIF3K-STMN3 EIF3K chr19 39116738 STMN3 chr20 62271158 Exonic hg19 NA AW498858 Out-of-frame Inter-chr q13.33 122967 ChimerSeq ChiTaRs ChiTaRs MALAT1-IPO13 MALAT1 chr11 65266739 IPO13 chr1 44426565 Exonic hg19 NA AA341078 Out-of-frame Inter-chr q13.1 p34.1 122968 ChimerSeq ChiTaRs ChiTaRs SIX1-SIX1 SIX1 chr14 61111516 SIX1 chr14 61111461 Exonic hg19 NA BU676008 Out-of-frame Intra-chr q23.1 Transcription factor q23.1 Transcription factor 122969 ChimerSeq ChiTaRs ChiTaRs RHOT1-RHOT1 RHOT1 chr17 30501187 RHOT1 chr17 30502203 Exonic hg19 NA BG994788 Out-of-frame Intra-chr q11.2 q11.2 122970 ChimerSeq ChiTaRs ChiTaRs ACVRL1-SH3D19 ACVRL1 chr12 52315904 SH3D19 chr4 152047374 Exonic hg19 NA BG013238 Out-of-frame Inter-chr q13.13 Oncogene q31.3 122971 ChimerSeq ChiTaRs ChiTaRs LRP5-LRP5 LRP5 chr11 68197135 LRP5 chr11 68191138 Exonic hg19 NA BG960848 Out-of-frame Intra-chr q13.2 q13.2 122972 ChimerSeq ChiTaRs ChiTaRs ANP32A-HES2 ANP32A chr15 69103844 HES2 chr1 6476149 Exonic hg19 NA BG002858 Out-of-frame Inter-chr q23 Tumor suppressor gene p36.31 Transcription factor 122973 ChimerSeq ChiTaRs ChiTaRs THBS1-PRPF8 THBS1 chr15 39875351 PRPF8 chr17 1584046 Exonic hg19 NA BI046008 Out-of-frame Inter-chr q14 Oncogene Tumor suppressor gene 122974 ChimerSeq ChiTaRs ChiTaRs STRN4-TNRC6A STRN4 chr19 47222828 TNRC6A chr16 24756625 Exonic hg19 NA AA962358 Out-of-frame Inter-chr q13.32 p12.1 122975 ChimerSeq ChiTaRs ChiTaRs LLGL2-SORBS1 LLGL2 chr17 73565184 SORBS1 chr10 97303892 Exonic hg19 NA BF870758 Out-of-frame Inter-chr q25.1 q24.1 122976 ChimerSeq ChiTaRs ChiTaRs SUV420H2-MVD SUV420H2 chr19 55853640 MVD chr16 88723899 Exonic hg19 NA BI914518 Out-of-frame Inter-chr q24.2 122977 ChimerSeq ChiTaRs ChiTaRs SFSWAP-SFSWAP SFSWAP chr12 132283655 SFSWAP chr12 132283626 Exonic hg19 NA AW385778 Out-of-frame Intra-chr q24.33 q24.33 122978 ChimerSeq ChiTaRs ChiTaRs HSP90AA1-MS4A6A HSP90AA1 chr14 102551308 MS4A6A chr11 59946798 Exonic hg19 NA BP378998 Out-of-frame Inter-chr q32.31 Oncogene q12.2 122979 ChimerSeq ChiTaRs ChiTaRs NEK9-NEK9 NEK9 chr14 75549325 NEK9 chr14 75548949 Exonic hg19 NA AA262378 Out-of-frame Intra-chr q24.3 Other:NEK q24.3 Other:NEK 122980 ChimerSeq ChiTaRs ChiTaRs SLC24A3-DDAH1 SLC24A3 chr20 19516799 DDAH1 chr1 85955067 Exonic hg19 NA BG981308 Out-of-frame Inter-chr p11.23 p22.3 122981 ChimerSeq ChiTaRs ChiTaRs SMG9-KDM1B SMG9 chr19 44259036 KDM1B chr6 18212731 Exonic hg19 NA BQ067678 Out-of-frame Inter-chr q13.31 p22.3 122982 ChimerSeq ChiTaRs ChiTaRs ZNF740-AGAP2 ZNF740 chr12 53583006 AGAP2 chr12 58135206 Exonic hg19 NA AA883778 Out-of-frame Intra-chr q13.13 Transcription factor q14.1 122983 ChimerSeq ChiTaRs ChiTaRs PEBP1-STOM PEBP1 chr12 118583365 STOM chr9 124110291 Exonic hg19 NA AI064908 Out-of-frame Inter-chr q24.23 Tumor suppressor gene q33.2 122984 ChimerSeq ChiTaRs ChiTaRs NEMF-WWOX NEMF chr14 50096665 WWOX chr16 78268559 Exonic hg19 NA AW874698 Out-of-frame Inter-chr q21.3 q23.1 Tumor suppressor gene 122985 ChimerSeq ChiTaRs ChiTaRs COLEC12-COLEC12 COLEC12 chr18 333106 COLEC12 chr18 346606 Exonic hg19 NA BE929798 Out-of-frame Intra-chr p11.32 p11.32 122986 ChimerSeq ChiTaRs ChiTaRs GNAS-TRIM61 GNAS chr20 57485815 TRIM61 chr4 165878136 Exonic hg19 NA BU070138 Out-of-frame Inter-chr q13.32 Oncogene q32.3 122987 ChimerSeq ChiTaRs ChiTaRs GPC6-GPC6 GPC6 chr13 93927295 GPC6 chr13 93906462 Exonic hg19 NA DA568128 Out-of-frame Intra-chr q31.3 q31.3 122988 ChimerSeq ChiTaRs ChiTaRs VDR-VDR VDR chr12 48244645 VDR chr12 48244795 Exonic hg19 NA BX956498 Out-of-frame Intra-chr q13.11 Tumor suppressor gene Transcription factor q13.11 Tumor suppressor gene Transcription factor 122989 ChimerSeq ChiTaRs ChiTaRs CST1-BCLAF1 CST1 chr20 23728288 BCLAF1 chr6 136579727 Exonic hg19 NA BX648878 Out-of-frame Inter-chr p11.21 q23.3 122990 ChimerSeq ChiTaRs ChiTaRs SETDB2-STEAP2 SETDB2 chr13 50064841 STEAP2 chr7 89863253 Exonic hg19 NA AI768908 Out-of-frame Inter-chr q14.2 Transcription factor q21.13 122991 ChimerSeq ChiTaRs ChiTaRs EEF2-TAPBP EEF2 chr19 3980927 TAPBP chr6 4746551 Exonic hg19 NA AI905878 Out-of-frame Inter-chr p13.3 122992 ChimerSeq ChiTaRs ChiTaRs RPLP0-CDS1 RPLP0 chr12 120637174 CDS1 chr4 85522777 Exonic hg19 NA BE698288 Out-of-frame Inter-chr q24.23 q21.23 Tumor suppressor gene 122993 ChimerSeq ChiTaRs ChiTaRs PEX26-TSHZ2 PEX26 chr22 18572265 TSHZ2 chr20 51762298 Exonic hg19 NA BF155568 Out-of-frame Inter-chr q11.21 q13.2 Transcription factor 122994 ChimerSeq ChiTaRs ChiTaRs PRKCA-LYZ PRKCA chr17 64684673 LYZ chr12 69747383 Exonic hg19 NA AK098118 Out-of-frame Inter-chr q24.2 q15 122995 ChimerSeq ChiTaRs ChiTaRs ASGR2-ASGR2 ASGR2 chr17 7012176 ASGR2 chr17 7004670 Exonic hg19 NA CB162748 Out-of-frame Intra-chr p13.1 p13.1 122996 ChimerSeq ChiTaRs ChiTaRs ZNFX1-AS1-ZNFX1-AS1 ZNFX1-AS1 chr20 47897497 ZNFX1-AS1 chr20 47897474 Exonic hg19 NA AJ712898 Out-of-frame Intra-chr Tumor suppressor gene 122997 ChimerSeq ChiTaRs ChiTaRs MYLK3-HSPA12B MYLK3 chr16 46740994 HSPA12B chr20 3722443 Exonic hg19 NA R47378 Out-of-frame Inter-chr q11.2 p13 122998 ChimerSeq ChiTaRs ChiTaRs CYP19A1-CYFIP1 CYP19A1 chr15 51514415 CYFIP1 chr15 22976553 Exonic hg19 NA BF988608 Out-of-frame Intra-chr q21.2 q11.2 122999 ChimerSeq ChiTaRs ChiTaRs TCF3-PWP2 TCF3 chr19 1619204 PWP2 chr21 45541997 Exonic hg19 NA BG953208 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor q22.3 123000 ChimerSeq ChiTaRs ChiTaRs MALAT1-DBN1 MALAT1 chr11 65271254 DBN1 chr5 176886177 Exonic hg19 NA CB148218 Out-of-frame Inter-chr q13.1 q35.3 123001 ChimerSeq ChiTaRs ChiTaRs ACBD4-TNFAIP8 ACBD4 chr17 43216359 TNFAIP8 chr5 118728328 Exonic hg19 NA AA370188 Out-of-frame Inter-chr q21.31 q23.1 123002 ChimerSeq ChiTaRs ChiTaRs PLEKHA5-TRIM29 PLEKHA5 chr12 19410412 TRIM29 chr11 119999118 Exonic hg19 NA BG993058 Out-of-frame Inter-chr p12.3 q23.3 123003 ChimerSeq ChiTaRs ChiTaRs ZBED4-ZBED4 ZBED4 chr22 50278019 ZBED4 chr22 50278319 Exonic hg19 NA BF155788 Out-of-frame Intra-chr q13.33 Transcription factor q13.33 Transcription factor 123004 ChimerSeq ChiTaRs ChiTaRs TPM1-TPM1 TPM1 chr15 63363409 TPM1 chr15 63353433 Exonic hg19 NA BE005428 Out-of-frame Intra-chr q22.2 q22.2 123005 ChimerSeq ChiTaRs ChiTaRs NAA20-NAA20 NAA20 chr20 20013932 NAA20 chr20 20013183 Exonic hg19 NA BG284638 Out-of-frame Intra-chr p11.23 p11.23 123006 ChimerSeq ChiTaRs ChiTaRs SLC2A10-MGAT1 SLC2A10 chr20 45361575 MGAT1 chr5 180224026 Exonic hg19 NA AW818318 Out-of-frame Inter-chr q13.12 q35.3 123007 ChimerSeq ChiTaRs ChiTaRs ETNK1-ETNK1 ETNK1 chr12 22843588 ETNK1 chr12 22842331 Exonic hg19 NA BQ637998 Out-of-frame Intra-chr p12.1 p12.1 123008 ChimerSeq ChiTaRs ChiTaRs DDX6-FGD4 DDX6 chr11 118647931 FGD4 chr12 32699487 Exonic hg19 NA BF356738 Out-of-frame Inter-chr q23.3 p11.21 123009 ChimerSeq ChiTaRs ChiTaRs MRPS7-MRPS7 MRPS7 chr17 73262444 MRPS7 chr17 73262027 Exonic hg19 NA BU676688 Out-of-frame Intra-chr q25.1 q25.1 123010 ChimerSeq ChiTaRs ChiTaRs R3HDML-DIAPH3 R3HDML chr20 42973885 DIAPH3 chr13 60411846 Exonic hg19 NA BF335408 Out-of-frame Inter-chr q13.12 q21.2 123011 ChimerSeq ChiTaRs ChiTaRs PACSIN2-EPHB1 PACSIN2 chr22 43382994 EPHB1 chr3 134957527 Exonic hg19 NA BE148118 Out-of-frame Inter-chr q13.2 q22.2 Oncogene 123012 ChimerSeq ChiTaRs ChiTaRs NTM-OTUD7B NTM chr11 131721427 OTUD7B chr1 149913946 Exonic hg19 NA EB387238 Out-of-frame Inter-chr q25 q21.2 123013 ChimerSeq ChiTaRs ChiTaRs COL1A1-COL1A1 COL1A1 chr17 48262991 COL1A1 chr17 48261457 Exonic hg19 NA BM716828 Out-of-frame Intra-chr q21.33 Oncogene q21.33 Oncogene 123014 ChimerSeq ChiTaRs ChiTaRs BCAT2-MS4A6A BCAT2 chr19 49310796 MS4A6A chr11 59942886 Exonic hg19 NA BF934808 Out-of-frame Inter-chr q13.33 q12.2 123015 ChimerSeq ChiTaRs ChiTaRs KCNJ15-ZFPM1 KCNJ15 chr21 39619483 ZFPM1 chr16 88587216 Exonic hg19 NA AJ311492 Out-of-frame Inter-chr q22.13 q24.2 Transcription factor 123016 ChimerSeq ChiTaRs ChiTaRs RNASEK-C17orf49-IKBKE RNASEK-C17orf49 chr17 6917849 IKBKE chr1 206643948 Exonic hg19 NA AI539428 Out-of-frame Inter-chr p13.1 q32.1 123017 ChimerSeq ChiTaRs ChiTaRs CFD-MED16 CFD chr19 861956 MED16 chr19 871050 Exonic hg19 NA BM825118 Out-of-frame Intra-chr p13.3 p13.3 123018 ChimerSeq ChiTaRs ChiTaRs BAZ2A-TBC1D12 BAZ2A chr12 57008762 TBC1D12 chr10 96269370 Exonic hg19 NA BF376008 Out-of-frame Inter-chr q13.3 Transcription factor q23.33 123019 ChimerSeq ChiTaRs ChiTaRs C12orf5-C12orf5 C12orf5 chr12 4463449 C12orf5 chr12 4463725 Exonic hg19 NA AW301608 Out-of-frame Intra-chr 123020 ChimerSeq ChiTaRs ChiTaRs USP3-USP3 USP3 chr15 63838251 USP3 chr15 63835698 Exonic hg19 NA AK024198 Out-of-frame Intra-chr q22.31 q22.31 123021 ChimerSeq ChiTaRs ChiTaRs FURIN-FURIN FURIN chr15 91420397 FURIN chr15 91419119 Exonic hg19 NA BG004888 Out-of-frame Intra-chr q26.1 q26.1 123022 ChimerSeq ChiTaRs ChiTaRs VPS33B-VPS33B VPS33B chr15 91559287 VPS33B chr15 91561587 Exonic hg19 NA BQ883678 Out-of-frame Intra-chr q26.1 q26.1 123023 ChimerSeq ChiTaRs ChiTaRs POMT2-POMT2 POMT2 chr14 77741429 POMT2 chr14 77741302 Exonic hg19 NA AA737198 Out-of-frame Intra-chr q24.3 q24.3 123024 ChimerSeq ChiTaRs ChiTaRs KIAA0100-C1QTNF1 KIAA0100 chr17 26946908 C1QTNF1 chr17 77025508 Exonic hg19 NA BG015748 Out-of-frame Intra-chr q11.2 q25.3 123025 ChimerSeq ChiTaRs ChiTaRs TGM2-TGM2 TGM2 chr20 36775269 TGM2 chr20 36775259 Exonic hg19 NA BF748178 Out-of-frame Intra-chr q11.23 q11.23 123026 ChimerSeq ChiTaRs ChiTaRs SYVN1-MRPL49 SYVN1 chr11 64895386 MRPL49 chr11 64894753 Exonic hg19 NA BI820138 Out-of-frame Intra-chr q13.1 q13.1 123027 ChimerSeq ChiTaRs ChiTaRs MALAT1-CTSZ MALAT1 chr11 65272576 CTSZ chr20 57570687 Exonic hg19 NA BI010328 Out-of-frame Inter-chr q13.1 q13.32 123028 ChimerSeq ChiTaRs ChiTaRs BOLA2-C6orf228 BOLA2 chr16 30081582 C6orf228 chr6 11108409 Exonic hg19 NA BE707878 Out-of-frame Inter-chr p11.2 123029 ChimerSeq ChiTaRs ChiTaRs ZBTB4-C6orf62 ZBTB4 chr17 7362771 C6orf62 chr6 24718828 Exonic hg19 NA BQ951468 Out-of-frame Inter-chr Tumor suppressor gene Transcription factor p22.3 123030 ChimerSeq ChiTaRs ChiTaRs BCAS3-TRBV20-1 BCAS3 chr17 59470162 TRBV20-1 chr16 1988445 Exonic hg19 NA BG954018 Out-of-frame Inter-chr q23.2 123031 ChimerSeq ChiTaRs ChiTaRs SAMD14-LARP1 SAMD14 chr17 48191603 LARP1 chr5 154182402 Exonic hg19 NA AW590118 Out-of-frame Inter-chr q21.33 q33.2 123032 ChimerSeq ChiTaRs ChiTaRs DDX10-DDX10 DDX10 chr11 108674881 DDX10 chr11 108672930 Exonic hg19 NA DA647188 Out-of-frame Intra-chr q22.3 q22.3 123033 ChimerSeq ChiTaRs ChiTaRs TMPRSS2-FKBP5 TMPRSS2 chr21 42880078 FKBP5 chr6 35565019 Exonic hg19 NA HM245387 Out-of-frame Inter-chr q22.3 p21.31 123034 ChimerSeq ChiTaRs ChiTaRs STARD13-PPP1R14C STARD13 chr13 33875408 PPP1R14C chr6 150538180 Exonic hg19 NA BG991328 Out-of-frame Inter-chr q13.1 Tumor suppressor gene q25.1 123035 ChimerSeq ChiTaRs ChiTaRs GPC6-MPHOSPH8 GPC6 chr13 94445040 MPHOSPH8 chr13 20221321 Exonic hg19 NA BF155598 Out-of-frame Intra-chr q31.3 q12.11 123036 ChimerSeq ChiTaRs ChiTaRs ATN1-ATN1 ATN1 chr12 7051417 ATN1 chr12 7050552 Exonic hg19 NA AW175968 Out-of-frame Intra-chr p13.31 p13.31 123037 ChimerSeq ChiTaRs ChiTaRs ARHGDIB-CASQ2 ARHGDIB chr12 15114532 CASQ2 chr1 116310959 Exonic hg19 NA DA559468 Out-of-frame Inter-chr p12.3 p13.1 123038 ChimerSeq ChiTaRs ChiTaRs CSTF1-CSTF1 CSTF1 chr20 54979520 CSTF1 chr20 54979233 Exonic hg19 NA CA843958 Out-of-frame Intra-chr q13.2 q13.2 123039 ChimerSeq ChiTaRs ChiTaRs MAPKAPK5-MAPKAPK5 MAPKAPK5 chr12 112326570 MAPKAPK5 chr12 112325382 Exonic hg19 NA BP398708 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 CAMK:MAPKAPK 123040 ChimerSeq ChiTaRs ChiTaRs GABARAPL1-GIGYF2 GABARAPL1 chr12 10375721 GIGYF2 chr2 233612385 Exonic hg19 NA AI215508 Out-of-frame Inter-chr p13.2 q37.1 123041 ChimerSeq ChiTaRs ChiTaRs GLT25D1-GLT25D1 GLT25D1 chr19 17690401 GLT25D1 chr19 17683333 Exonic hg19 NA Z25328 Out-of-frame Intra-chr 123042 ChimerSeq ChiTaRs ChiTaRs NCAM1-RABEP1 NCAM1 chr11 113131002 RABEP1 chr17 5235335 Exonic hg19 NA BE810468 Out-of-frame Inter-chr q23.2 p13.2 123043 ChimerSeq ChiTaRs ChiTaRs MEG3-MEG3 MEG3 chr14 101316261 MEG3 chr14 101318708 Exonic hg19 NA AI636778 Out-of-frame Intra-chr q32.2 Tumor suppressor gene q32.2 Tumor suppressor gene 123044 ChimerSeq ChiTaRs ChiTaRs ERCC1-FN1 ERCC1 chr19 45975895 FN1 chr2 216273026 Exonic hg19 NA BF809968 Out-of-frame Inter-chr q13.32 Oncogene q35 Oncogene 123045 ChimerSeq ChiTaRs ChiTaRs SMARCB1-SMARCB1 SMARCB1 chr22 24134001 SMARCB1 chr22 24159052 Exonic hg19 NA BE932658 Out-of-frame Intra-chr q11.23 Oncogene Tumor suppressor gene q11.23 Oncogene Tumor suppressor gene 123046 ChimerSeq ChiTaRs ChiTaRs MICAL3-SLC1A3 MICAL3 chr22 18272808 SLC1A3 chr5 36661831 Exonic hg19 NA BE936478 Out-of-frame Inter-chr q11.21 p13.2 123047 ChimerSeq ChiTaRs ChiTaRs HUNK-CNOT10 HUNK chr21 33312316 CNOT10 chr3 32810076 Exonic hg19 NA AW937598 Out-of-frame Inter-chr q22.11 CAMK:CAMKL p22.3 123048 ChimerSeq ChiTaRs ChiTaRs RBM25-RBM25 RBM25 chr14 73566112 RBM25 chr14 73544130 Exonic hg19 NA BX506968 Out-of-frame Intra-chr q24.2 q24.2 123049 ChimerSeq ChiTaRs ChiTaRs DNASE2-C12orf65 DNASE2 chr19 12992250 C12orf65 chr12 123736919 Exonic hg19 NA DA604038 Out-of-frame Inter-chr p13.13 q24.31 123050 ChimerSeq ChiTaRs ChiTaRs TIMP2-TIMP2 TIMP2 chr17 76850306 TIMP2 chr17 76851026 Exonic hg19 NA BE812478 Out-of-frame Intra-chr q25.3 q25.3 123051 ChimerSeq ChiTaRs ChiTaRs TM9SF4-CRTC3 TM9SF4 chr20 30713059 CRTC3 chr15 91172691 Exonic hg19 NA AW889448 Out-of-frame Inter-chr q11.21 q26.1 123052 ChimerSeq ChiTaRs ChiTaRs PIK3R2-PIK3R2 PIK3R2 chr19 18288526 PIK3R2 chr19 18284631 Exonic hg19 NA BG314628 Out-of-frame Intra-chr p13.11 Oncogene p13.11 Oncogene 123053 ChimerSeq ChiTaRs ChiTaRs CHMP1A-CHMP1A CHMP1A chr16 89711450 CHMP1A chr16 89710846 Exonic hg19 NA BQ223078 Out-of-frame Intra-chr q24.3 q24.3 123054 ChimerSeq ChiTaRs ChiTaRs DLGAP4-DLGAP4 DLGAP4 chr20 35145087 DLGAP4 chr20 35146012 Exonic hg19 NA BM929548 Out-of-frame Intra-chr q11.23 q11.23 123055 ChimerSeq ChiTaRs ChiTaRs FAM155A-ADIPOR1 FAM155A chr13 108372496 ADIPOR1 chr1 202911318 Exonic hg19 NA BF961218 Out-of-frame Inter-chr q33.3 q32.1 123056 ChimerSeq ChiTaRs ChiTaRs CSNK1G2-CSNK1G2 CSNK1G2 chr19 1980467 CSNK1G2 chr19 1980682 Exonic hg19 NA BF064078 Out-of-frame Intra-chr p13.3 p13.3 123057 ChimerSeq ChiTaRs ChiTaRs MCRS1-MCRS1 MCRS1 chr12 49953262 MCRS1 chr12 49959858 Exonic hg19 NA W26888 Out-of-frame Intra-chr q13.12 q13.12 123058 ChimerSeq ChiTaRs ChiTaRs SRRM2-SRRM2 SRRM2 chr16 2821409 SRRM2 chr16 2816143 Exonic hg19 NA BQ028758 Out-of-frame Intra-chr p13.3 p13.3 123059 ChimerSeq ChiTaRs ChiTaRs RAB5B-CCNL1 RAB5B chr12 56386937 CCNL1 chr3 156866235 Exonic hg19 NA BF799938 Out-of-frame Inter-chr q13.2 q25.31 123060 ChimerSeq ChiTaRs ChiTaRs MPDU1-MPDU1 MPDU1 chr17 7491135 MPDU1 chr17 7489323 Exonic hg19 NA AF258568 Out-of-frame Intra-chr p13.1 p13.1 123061 ChimerSeq ChiTaRs ChiTaRs THAP7-THAP7 THAP7 chr22 21354686 THAP7 chr22 21354329 Exonic hg19 NA AA426248 Out-of-frame Intra-chr q11.21 Transcription factor q11.21 Transcription factor 123062 ChimerSeq ChiTaRs ChiTaRs ACO2-EZR ACO2 chr22 41903979 EZR chr6 159236148 Exonic hg19 NA AW379928 Out-of-frame Inter-chr q13.2 q25.3 123063 ChimerSeq ChiTaRs ChiTaRs RANBP1-NUMB RANBP1 chr22 20114706 NUMB chr14 73824107 Exonic hg19 NA CD248988 Out-of-frame Inter-chr q11.21 q24.3 Tumor suppressor gene 123064 ChimerSeq ChiTaRs ChiTaRs MAPK1-GPR107 MAPK1 chr22 22214302 GPR107 chr9 132893565 Exonic hg19 NA BF330168 Out-of-frame Inter-chr q11.22 Oncogene q34.11 123065 ChimerSeq ChiTaRs ChiTaRs SNRPB2-KIAA1430 SNRPB2 chr20 16717994 KIAA1430 chr4 186108721 Exonic hg19 NA BP351328 Out-of-frame Inter-chr p12.1 123066 ChimerSeq ChiTaRs ChiTaRs MPDU1-TANC2 MPDU1 chr17 7491510 TANC2 chr17 61477300 Exonic hg19 NA BM988998 Out-of-frame Intra-chr p13.1 q23.2 123067 ChimerSeq ChiTaRs ChiTaRs SPPL3-SPPL3 SPPL3 chr12 121204133 SPPL3 chr12 121202555 Exonic hg19 NA BF361358 Out-of-frame Intra-chr q24.31 q24.31 123068 ChimerSeq ChiTaRs ChiTaRs C17orf76-AS1-APEX1 C17orf76-AS1 chr17 16342729 APEX1 chr14 20923736 Exonic hg19 NA DA079378 Out-of-frame Inter-chr q11.2 Tumor suppressor gene 123069 ChimerSeq ChiTaRs ChiTaRs ZNFX1-AS1-RPS16 ZNFX1-AS1 chr20 47905797 RPS16 chr19 39924313 Exonic hg19 NA BQ218778 Out-of-frame Inter-chr q13.2 Tumor suppressor gene 123070 ChimerSeq ChiTaRs ChiTaRs MAPKBP1-MAPKBP1 MAPKBP1 chr15 42077789 MAPKBP1 chr15 42077184 Exonic hg19 NA N31218 Out-of-frame Intra-chr q15.1 q15.1 123071 ChimerSeq ChiTaRs ChiTaRs RAB31-PSMA4 RAB31 chr18 9862549 PSMA4 chr15 78841164 Exonic hg19 NA AW149658 Out-of-frame Inter-chr p11.22 q25.1 123072 ChimerSeq ChiTaRs ChiTaRs ZNF609-PRKCE ZNF609 chr15 64976510 PRKCE chr2 46165530 Exonic hg19 NA BF858898 Out-of-frame Inter-chr q22.31 Transcription factor p21 Tumor suppressor gene 123073 ChimerSeq ChiTaRs ChiTaRs MAPRE2-GAB1 MAPRE2 chr18 32585517 GAB1 chr4 144354642 Exonic hg19 NA DA240048 5'UTR-CDS Inter-chr q12.1 q31.21 123074 ChimerSeq ChiTaRs ChiTaRs ZNF500-THOC2 ZNF500 chr16 4802799 THOC2 chrX 122734945 Exonic hg19 NA BF156048 Out-of-frame Inter-chr p13.3 Transcription factor q25 123075 ChimerSeq ChiTaRs ChiTaRs ST6GALNAC1-ST6GALNAC1 ST6GALNAC1 chr17 74636387 ST6GALNAC1 chr17 74636419 Exonic hg19 NA CV336378 Out-of-frame Intra-chr q25.1 q25.1 123076 ChimerSeq ChiTaRs ChiTaRs EPS8-EPS8 EPS8 chr12 15803785 EPS8 chr12 15777140 Exonic hg19 NA AW673298 Out-of-frame Intra-chr p12.3 p12.3 123077 ChimerSeq ChiTaRs ChiTaRs ITGA5-AZI2 ITGA5 chr12 54790061 AZI2 chr3 28364863 Exonic hg19 NA AK123678 Out-of-frame Inter-chr q13.13 Tumor suppressor gene p24.1 123078 ChimerSeq ChiTaRs ChiTaRs ZNF333-ZFR ZNF333 chr19 14818868 ZFR chr5 32424223 Exonic hg19 NA AW850208 Out-of-frame Inter-chr p13.12 Transcription factor p13.3 123079 ChimerSeq ChiTaRs ChiTaRs RAC2-RAC2 RAC2 chr22 37628883 RAC2 chr22 37627334 Exonic hg19 NA AA079558 Out-of-frame Intra-chr q13.1 q13.1 123080 ChimerSeq ChiTaRs ChiTaRs SRRM2-JAG1 SRRM2 chr16 2813314 JAG1 chr20 10624534 Exonic hg19 NA BF873118 Out-of-frame Inter-chr p13.3 p12.2 123081 ChimerSeq ChiTaRs ChiTaRs PCSK4-P2RX3 PCSK4 chr19 1488557 P2RX3 chr11 57107719 Exonic hg19 NA T10978 Out-of-frame Inter-chr p13.3 q12.1 123082 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65266824 MALAT1 chr11 65266572 Exonic hg19 NA BU680148 Out-of-frame Intra-chr q13.1 q13.1 123083 ChimerSeq ChiTaRs ChiTaRs ZSWIM4-PLCB1 ZSWIM4 chr19 13929072 PLCB1 chr20 8226543 Exonic hg19 NA BF954088 Out-of-frame Inter-chr p13.13 p12.3 123084 ChimerSeq ChiTaRs ChiTaRs TBX1-CUL9 TBX1 chr22 19747709 CUL9 chr6 43163808 Exonic hg19 NA AI131138 Out-of-frame Inter-chr q11.21 Transcription factor p21.1 123085 ChimerSeq ChiTaRs ChiTaRs CHD8-CHD8 CHD8 chr14 21861401 CHD8 chr14 21860689 Exonic hg19 NA AA448938 Out-of-frame Intra-chr q11.2 q11.2 123086 ChimerSeq ChiTaRs ChiTaRs UPF1-UPF1 UPF1 chr19 18976229 UPF1 chr19 18976160 Exonic hg19 NA CN406978 Out-of-frame Intra-chr p13.11 p13.11 123087 ChimerSeq ChiTaRs ChiTaRs BCAT2-ZNF76 BCAT2 chr19 49298468 ZNF76 chr6 35253925 Exonic hg19 NA BF062738 Out-of-frame Inter-chr q13.33 p21.31 Transcription factor 123088 ChimerSeq ChiTaRs ChiTaRs FOXN3-MBNL1 FOXN3 chr14 90079754 MBNL1 chr3 152031275 Exonic hg19 NA BG485148 Out-of-frame Inter-chr q32.11 Transcription factor q25.1 123089 ChimerSeq ChiTaRs ChiTaRs TRIM29-TRIM29 TRIM29 chr11 120008821 TRIM29 chr11 120008174 Exonic hg19 NA DB107228 Out-of-frame Intra-chr q23.3 q23.3 123090 ChimerSeq ChiTaRs ChiTaRs PSMC5-PSMC5 PSMC5 chr17 61909140 PSMC5 chr17 61909289 Exonic hg19 NA BI002868 Out-of-frame Intra-chr q23.3 q23.3 123091 ChimerSeq ChiTaRs ChiTaRs ETFA-ETFA ETFA chr15 76588010 ETFA chr15 76577976 Exonic hg19 NA CB163238 Out-of-frame Intra-chr q24.3 q24.3 123092 ChimerSeq ChiTaRs ChiTaRs PSMC4-PSMC4 PSMC4 chr19 40487344 PSMC4 chr19 40487098 Exonic hg19 NA BU608468 3'UTR-CDS Intra-chr 123093 ChimerSeq ChiTaRs ChiTaRs DSCAML1-THTPA DSCAML1 chr11 117363029 THTPA chr14 24028052 Exonic hg19 NA BF960308 Out-of-frame Inter-chr q23.3 q11.2 123094 ChimerSeq ChiTaRs ChiTaRs FLI1-EWSR1 FLI1 chr11 128650068 EWSR1 chr22 29683677 Exonic hg19 NA JX266512 Out-of-frame Inter-chr q24.3 Oncogene Transcription factor q12.2 KB Pub 123095 ChimerSeq ChiTaRs ChiTaRs CDK10-MDS2 CDK10 chr16 89760298 MDS2 chr1 23966229 Exonic hg19 NA BI013978 Out-of-frame Inter-chr q24.3 CMGC:CDK p36.12 123096 ChimerSeq ChiTaRs ChiTaRs TSC22D1-ITCH TSC22D1 chr13 45009020 ITCH chr20 33081144 Exonic hg19 NA AA781408 Out-of-frame Inter-chr q14.11 Tumor suppressor gene Transcription factor q11.22 123097 ChimerSeq ChiTaRs ChiTaRs AARS-ITPR3 AARS chr16 70289887 ITPR3 chr6 33635631 Exonic hg19 NA BF762968 Out-of-frame Inter-chr q22.1 p21.31 123098 ChimerSeq ChiTaRs ChiTaRs MCM8-MCM8 MCM8 chr20 5951359 MCM8 chr20 5951345 Exonic hg19 NA AK160378 Out-of-frame Intra-chr p12.3 p12.3 123099 ChimerSeq ChiTaRs ChiTaRs SP1-TUBB SP1 chr12 53777262 TUBB chr6 2025181 Exonic hg19 NA BF902308 Out-of-frame Inter-chr q13.13 Transcription factor 123100 ChimerSeq ChiTaRs ChiTaRs C2CD3-NISCH C2CD3 chr11 73881466 NISCH chr3 52515281 Exonic hg19 NA BF858378 Out-of-frame Inter-chr q13.4 p21.1 123101 ChimerSeq ChiTaRs ChiTaRs TULP3-TULP3 TULP3 chr12 3050025 TULP3 chr12 3049277 Exonic hg19 NA BC019618 Out-of-frame Intra-chr p13.33 p13.33 123102 ChimerSeq ChiTaRs ChiTaRs PBX4-SH3RF3 PBX4 chr19 19703979 SH3RF3 chr2 109831138 Exonic hg19 NA BF805568 Out-of-frame Inter-chr p13.11 Transcription factor q13 123103 ChimerSeq ChiTaRs ChiTaRs CPT1A-GAPDH CPT1A chr11 68575053 GAPDH chr12 6647494 Exonic hg19 NA BM041208 Out-of-frame Inter-chr q13.3 p13.31 123104 ChimerSeq ChiTaRs ChiTaRs KCTD5-NDE1 KCTD5 chr16 2758866 NDE1 chr16 15797902 Exonic hg19 NA BF084658 Out-of-frame Intra-chr p13.3 p13.11 123105 ChimerSeq ChiTaRs ChiTaRs ATP11A-ATP11A ATP11A chr13 113536673 ATP11A chr13 113536727 Exonic hg19 NA BQ307328 Out-of-frame Intra-chr q34 q34 123106 ChimerSeq ChiTaRs ChiTaRs ITGAL-PSMD8 ITGAL chr16 30525166 PSMD8 chr19 38866122 Exonic hg19 NA BF093758 Out-of-frame Inter-chr p11.2 q13.2 123107 ChimerSeq ChiTaRs ChiTaRs FBXL3-C20orf27 FBXL3 chr13 77600695 C20orf27 chr20 3734200 Exonic hg19 NA AI739608 Out-of-frame Inter-chr q22.3 p13 123108 ChimerSeq ChiTaRs ChiTaRs MALAT1-TRIM2 MALAT1 chr11 65267144 TRIM2 chr4 154154239 Exonic hg19 NA BF753218 Out-of-frame Inter-chr q13.1 q31.3 123109 ChimerSeq ChiTaRs ChiTaRs TNFAIP1-TNFAIP1 TNFAIP1 chr17 26670094 TNFAIP1 chr17 26665228 Exonic hg19 NA BE144448 Out-of-frame Intra-chr q11.2 q11.2 123110 ChimerSeq ChiTaRs ChiTaRs SF3B2-PTMA SF3B2 chr11 65826433 PTMA chr2 232576624 Exonic hg19 NA BG164388 Out-of-frame Inter-chr q13.1 q37.1 123111 ChimerSeq ChiTaRs ChiTaRs ATP2A2-MURC ATP2A2 chr12 110788517 MURC chr9 103349577 Exonic hg19 NA BF790578 Out-of-frame Inter-chr q24.11 123112 ChimerSeq ChiTaRs ChiTaRs PCSK2-SMAD4 PCSK2 chr20 17256436 SMAD4 chr18 48559252 Exonic hg19 NA BF825528 Out-of-frame Inter-chr p12.1 q21.2 Oncogene Tumor suppressor gene Transcription factor 123113 ChimerSeq ChiTaRs ChiTaRs CCDC137-RPL13AP20 CCDC137 chr17 79640934 RPL13AP20 chr12 13028436 Exonic hg19 NA BC021568 Out-of-frame Inter-chr q25.3 p13.1 123114 ChimerSeq ChiTaRs ChiTaRs C17orf80-MYCN C17orf80 chr17 71243782 MYCN chr2 16085675 Exonic hg19 NA CX753028 Out-of-frame Inter-chr q25.1 p24.3 Oncogene Transcription factor 123115 ChimerSeq ChiTaRs ChiTaRs ARHGEF7-ARHGEF7 ARHGEF7 chr13 111933839 ARHGEF7 chr13 111806128 Exonic hg19 NA BF111258 Out-of-frame Intra-chr q34 q34 123116 ChimerSeq ChiTaRs ChiTaRs VAPB-VAPB VAPB chr20 57010657 VAPB chr20 56999371 Exonic hg19 NA BF872158 Out-of-frame Intra-chr q13.32 q13.32 123117 ChimerSeq ChiTaRs ChiTaRs BCAS3-BCAS3 BCAS3 chr17 59293385 BCAS3 chr17 59299324 Exonic hg19 NA DN917358 Out-of-frame Intra-chr q23.2 q23.2 123118 ChimerSeq ChiTaRs ChiTaRs CNP-NIPAL3 CNP chr17 40128737 NIPAL3 chr1 24792795 Exonic hg19 NA AA935868 Out-of-frame Inter-chr q21.2 p36.11 123119 ChimerSeq ChiTaRs ChiTaRs VMP1-PEX6 VMP1 chr17 57917593 PEX6 chr6 42934042 Exonic hg19 NA AA295678 Out-of-frame Inter-chr q23.1 p21.1 123120 ChimerSeq ChiTaRs ChiTaRs SENP3-SENP3 SENP3 chr17 7474922 SENP3 chr17 7474832 Exonic hg19 NA CN412798 Out-of-frame Intra-chr p13.1 p13.1 123121 ChimerSeq ChiTaRs ChiTaRs PAN3-HSDL2 PAN3 chr13 28779506 HSDL2 chr9 115209744 Exonic hg19 NA AW885158 Out-of-frame Inter-chr q12.2 q32 123122 ChimerSeq ChiTaRs ChiTaRs ARID2-FAM48A ARID2 chr12 46244956 FAM48A chr13 37590990 Exonic hg19 NA AL691598 Out-of-frame Inter-chr q12 Oncogene Tumor suppressor gene Transcription factor 123123 ChimerSeq ChiTaRs ChiTaRs TNRC6C-RIN3 TNRC6C chr17 76090045 RIN3 chr14 93097369 Exonic hg19 NA BI021858 Out-of-frame Inter-chr q25.3 q32.12 123124 ChimerSeq ChiTaRs ChiTaRs LAMP1-ZER1 LAMP1 chr13 113969095 ZER1 chr9 131517326 Exonic hg19 NA BG002218 Out-of-frame Inter-chr q34 Oncogene q34.11 123125 ChimerSeq ChiTaRs ChiTaRs TM7SF3-SSBP1 TM7SF3 chr12 27127161 SSBP1 chr7 141438128 Exonic hg19 NA BM838078 Out-of-frame Inter-chr p11.23 123126 ChimerSeq ChiTaRs ChiTaRs GALK2-GOPC GALK2 chr15 49454059 GOPC chr6 117896453 Exonic hg19 NA DB216138 Out-of-frame Inter-chr q21.1 q22.1 123127 ChimerSeq ChiTaRs ChiTaRs AES-MPHOSPH10 AES chr19 3053263 MPHOSPH10 chr2 71362676 Exonic hg19 NA BE835128 Out-of-frame Inter-chr p13.3 p13.3 123128 ChimerSeq ChiTaRs ChiTaRs MYO19-CIRH1A MYO19 chr17 34881133 CIRH1A chr16 69177183 Exonic hg19 NA BU844758 Out-of-frame Inter-chr q12 123129 ChimerSeq ChiTaRs ChiTaRs DPP9-LDB3 DPP9 chr19 4675842 LDB3 chr10 88488179 Exonic hg19 NA AA994238 Out-of-frame Inter-chr p13.3 q23.2 123130 ChimerSeq ChiTaRs ChiTaRs UBE2G1-RPRD1B UBE2G1 chr17 4234687 RPRD1B chr20 36698094 Exonic hg19 NA AW867848 Out-of-frame Inter-chr p13.2 q11.23 123131 ChimerSeq ChiTaRs ChiTaRs FOXJ2-CSDA FOXJ2 chr12 8198250 CSDA chr12 10854629 Exonic hg19 NA BF891438 Out-of-frame Intra-chr p13.31 Transcription factor 123132 ChimerSeq ChiTaRs ChiTaRs NSRP1-JAK1 NSRP1 chr17 28482426 JAK1 chr1 65299385 Exonic hg19 NA BE843948 Out-of-frame Inter-chr q11.2 p31.3 TK:JakA Oncogene 123133 ChimerSeq ChiTaRs ChiTaRs SYNJ2BP-COX16-SYNJ2BP-COX16 SYNJ2BP-COX16 chr14 70827494 SYNJ2BP-COX16 chr14 70827084 Exonic hg19 NA BF330628 Out-of-frame Intra-chr q24.2 q24.2 123134 ChimerSeq ChiTaRs ChiTaRs MEG3-DGKZ MEG3 chr14 101314990 DGKZ chr11 46389528 Exonic hg19 NA BI032998 Out-of-frame Inter-chr q32.2 Tumor suppressor gene p11.2 123135 ChimerSeq ChiTaRs ChiTaRs KIF1C-KIRREL3 KIF1C chr17 4906139 KIRREL3 chr11 126865239 Exonic hg19 NA CN261748 Out-of-frame Inter-chr p13.2 q24.2 123136 ChimerSeq ChiTaRs ChiTaRs PAPOLA-SORT1 PAPOLA chr14 97014255 SORT1 chr1 109883371 Exonic hg19 NA BQ307958 Out-of-frame Inter-chr q32.2 p13.3 123137 ChimerSeq ChiTaRs ChiTaRs NPEPPS-NPEPPS NPEPPS chr17 45699435 NPEPPS chr17 45699469 Exonic hg19 NA AW068488 Out-of-frame Intra-chr q21.32 q21.32 123138 ChimerSeq ChiTaRs ChiTaRs MYBL2-MYBL2 MYBL2 chr20 42343799 MYBL2 chr20 42343783 Exonic hg19 NA BE252428 Out-of-frame Intra-chr q13.12 Transcription factor q13.12 Transcription factor 123139 ChimerSeq ChiTaRs ChiTaRs ACACA-PRKDC ACACA chr17 35765578 PRKDC chr8 48798797 Exonic hg19 NA BF800878 Out-of-frame Inter-chr q11.21 Oncogene 123140 ChimerSeq ChiTaRs ChiTaRs TTLL13-ANK3 TTLL13 chr15 90815390 ANK3 chr10 61788211 Exonic hg19 NA BI056768 Out-of-frame Inter-chr q21.2 123141 ChimerSeq ChiTaRs ChiTaRs XPNPEP3-SPOCK1 XPNPEP3 chr22 41363876 SPOCK1 chr5 136312611 Exonic hg19 NA X73608 Out-of-frame Inter-chr q13.2 q31.2 123142 ChimerSeq ChiTaRs ChiTaRs VPS29-VPS29 VPS29 chr12 110938729 VPS29 chr12 110931470 Exonic hg19 NA DN917788 Out-of-frame Intra-chr q24.11 q24.11 123143 ChimerSeq ChiTaRs ChiTaRs NRGN-RPL8 NRGN chr11 124616858 RPL8 chr8 146016817 Exonic hg19 NA BF956598 Out-of-frame Inter-chr q24.2 q24.3 123144 ChimerSeq ChiTaRs ChiTaRs SLC16A3-SLC16A3 SLC16A3 chr17 80197355 SLC16A3 chr17 80195530 Exonic hg19 NA CB530028 Out-of-frame Intra-chr q25.3 q25.3 123145 ChimerSeq ChiTaRs ChiTaRs CERS5-CERS5 CERS5 chr12 50524046 CERS5 chr12 50524122 Exonic hg19 NA BE936718 Out-of-frame Intra-chr q13.12 q13.12 123146 ChimerSeq ChiTaRs ChiTaRs ABR-ABR ABR chr17 909295 ABR chr17 909382 Exonic hg19 NA BF950788 Out-of-frame Intra-chr p13.3 p13.3 123147 ChimerSeq ChiTaRs ChiTaRs NCAM1-NCAM1 NCAM1 chr11 113126723 NCAM1 chr11 113130891 Exonic hg19 NA W27168 In-Frame Intra-chr q23.2 q23.2 123148 ChimerSeq ChiTaRs ChiTaRs SART3-SART3 SART3 chr12 108916331 SART3 chr12 108916320 Exonic hg19 NA AA729648 Out-of-frame Intra-chr q23.3 q23.3 123149 ChimerSeq ChiTaRs ChiTaRs ATP6V0A1-CACNA1B ATP6V0A1 chr17 40673215 CACNA1B chr9 140811198 Exonic hg19 NA BF947308 Out-of-frame Inter-chr q21.2 q34.3 123150 ChimerSeq ChiTaRs ChiTaRs PIK3R2-ARIH1 PIK3R2 chr19 18279560 ARIH1 chr15 72877991 Exonic hg19 NA BG545738 Out-of-frame Inter-chr p13.11 Oncogene q24.1 123151 ChimerSeq ChiTaRs ChiTaRs SH3GL3-L3MBTL1 SH3GL3 chr15 84255169 L3MBTL1 chr20 42143074 Exonic hg19 NA U89358 Out-of-frame Inter-chr q25.2 q13.12 Transcription factor 123152 ChimerSeq ChiTaRs ChiTaRs FOXO1-CCNY FOXO1 chr13 41134907 CCNY chr10 35557421 Exonic hg19 NA BE767398 Out-of-frame Inter-chr q14.11 Oncogene Tumor suppressor gene Transcription factor p11.21 123153 ChimerSeq ChiTaRs ChiTaRs AKAP8L-FGFR1 AKAP8L chr19 15529803 FGFR1 chr8 38287450 Exonic hg19 NA BP285818 Out-of-frame Inter-chr p13.12 Transcription factor p11.23 TK:FGFR Oncogene 123154 ChimerSeq ChiTaRs ChiTaRs B3GNTL1-B3GNTL1 B3GNTL1 chr17 80943841 B3GNTL1 chr17 80944020 Exonic hg19 NA AW063448 Out-of-frame Intra-chr 123155 ChimerSeq ChiTaRs ChiTaRs SLC13A3-MPHOSPH10 SLC13A3 chr20 45260144 MPHOSPH10 chr2 71368364 Exonic hg19 NA BE160828 Out-of-frame Inter-chr q13.12 p13.3 123156 ChimerSeq ChiTaRs ChiTaRs SPATS2-SPATS2 SPATS2 chr12 49868334 SPATS2 chr12 49867628 Exonic hg19 NA AW368428 Out-of-frame Intra-chr q13.12 q13.12 123157 ChimerSeq ChiTaRs ChiTaRs WWOX-WWOX WWOX chr16 78965107 WWOX chr16 78965266 Exonic hg19 NA AW803508 Out-of-frame Intra-chr q23.1 Tumor suppressor gene q23.1 Tumor suppressor gene 123158 ChimerSeq ChiTaRs ChiTaRs PPFIA1-PPFIA1 PPFIA1 chr11 70230069 PPFIA1 chr11 70229797 Exonic hg19 NA AA730788 Out-of-frame Intra-chr q13.3 q13.3 123159 ChimerSeq ChiTaRs ChiTaRs NPTN-NPTN NPTN chr15 73887593 NPTN chr15 73887268 Exonic hg19 NA CV338298 Out-of-frame Intra-chr q24.1 q24.1 123160 ChimerSeq ChiTaRs ChiTaRs CHGA-CHGA CHGA chr14 93401625 CHGA chr14 93397918 Exonic hg19 NA AA972248 Out-of-frame Intra-chr q32.12 q32.12 123161 ChimerSeq ChiTaRs ChiTaRs FUK-DNMT3B FUK chr16 70497624 DNMT3B chr20 31390240 Exonic hg19 NA DB451208 Out-of-frame Inter-chr q22.1 q11.21 Tumor suppressor gene 123162 ChimerSeq ChiTaRs ChiTaRs ERG-BZW2 ERG chr21 39792100 BZW2 chr7 16725226 Exonic hg19 NA BF987118 Out-of-frame Inter-chr q22.2 Oncogene Transcription factor p21.1 123163 ChimerSeq ChiTaRs ChiTaRs PAK4-ZFP36 PAK4 chr19 39670046 ZFP36 chr19 39898643 Exonic hg19 NA BF511918 3'UTR-CDS Intra-chr q13.2 STE:STE20 q13.2 Tumor suppressor gene 123164 ChimerSeq ChiTaRs ChiTaRs NME4-NCL NME4 chr16 450758 NCL chr2 232321395 Exonic hg19 NA BF591148 Out-of-frame Inter-chr p13.3 q37.1 123165 ChimerSeq ChiTaRs ChiTaRs ESCO1-ESCO1 ESCO1 chr18 19154760 ESCO1 chr18 19155096 Exonic hg19 NA CA312668 Out-of-frame Intra-chr q11.2 q11.2 123166 ChimerSeq ChiTaRs ChiTaRs FRMD6-KIAA1731 FRMD6 chr14 52037129 KIAA1731 chr11 93463447 Exonic hg19 NA BU596878 Out-of-frame Inter-chr q22.1 123167 ChimerSeq ChiTaRs ChiTaRs MARK3-CAT MARK3 chr14 103958302 CAT chr11 34480167 Exonic hg19 NA BI022068 Out-of-frame Inter-chr q32.32 CAMK:CAMKL p13 Tumor suppressor gene 123168 ChimerSeq ChiTaRs ChiTaRs PTRF-GSTM2 PTRF chr17 40554682 GSTM2 chr1 110214162 Exonic hg19 NA BG993988 Out-of-frame Inter-chr p13.3 123169 ChimerSeq ChiTaRs ChiTaRs SNRPN-SNAP25 SNRPN chr15 25220210 SNAP25 chr20 10286958 Exonic hg19 NA BG715348 Out-of-frame Inter-chr q11.2 p12.2 123170 ChimerSeq ChiTaRs ChiTaRs OAF-CDK19 OAF chr11 120099714 CDK19 chr6 110942314 Exonic hg19 NA BQ345738 Out-of-frame Inter-chr q23.3 q21 123171 ChimerSeq ChiTaRs ChiTaRs RNMTL1-GPANK1 RNMTL1 chr17 693576 GPANK1 chr6 2962359 Exonic hg19 NA BF738028 Out-of-frame Inter-chr 123172 ChimerSeq ChiTaRs ChiTaRs C17orf76-AS1-SYN3 C17orf76-AS1 chr17 16342707 SYN3 chr22 33257020 Exonic hg19 NA DA973398 Out-of-frame Inter-chr q12.3 Tumor suppressor gene 123173 ChimerSeq ChiTaRs ChiTaRs FAM177A1-FAM177A1 FAM177A1 chr14 35552584 FAM177A1 chr14 35552241 Exonic hg19 NA AA502988 Out-of-frame Intra-chr q13.2 q13.2 123174 ChimerSeq ChiTaRs ChiTaRs HMGB1-HMGB1 HMGB1 chr13 31036358 HMGB1 chr13 31035844 Exonic hg19 NA BE154698 Out-of-frame Intra-chr q12.3 q12.3 123175 ChimerSeq ChiTaRs ChiTaRs AARS-AARS AARS chr16 70304212 AARS chr16 70310388 Exonic hg19 NA AA344178 Out-of-frame Intra-chr q22.1 q22.1 123176 ChimerSeq ChiTaRs ChiTaRs ZNHIT3-ZNHIT3 ZNHIT3 chr17 34852018 ZNHIT3 chr17 34851570 Exonic hg19 NA AA989438 Out-of-frame Intra-chr q12 q12 123177 ChimerSeq ChiTaRs ChiTaRs CUX2-CUX2 CUX2 chr12 111514465 CUX2 chr12 111524046 Exonic hg19 NA AA584828 Out-of-frame Intra-chr q24.11 Transcription factor q24.11 Transcription factor 123178 ChimerSeq ChiTaRs ChiTaRs CFL2-NOSTRIN CFL2 chr14 35180290 NOSTRIN chr2 169673397 Exonic hg19 NA R06328 Out-of-frame Inter-chr q13.1 123179 ChimerSeq ChiTaRs ChiTaRs ANKDD1A-NEAT1 ANKDD1A chr15 65249727 NEAT1 chr11 65209961 Exonic hg19 NA AA910598 Out-of-frame Inter-chr q22.31 q13.1 123180 ChimerSeq ChiTaRs ChiTaRs CKLF-CKLF CKLF chr16 66587213 CKLF chr16 66597882 Exonic hg19 NA AI375038 Out-of-frame Intra-chr q21 Tumor suppressor gene q21 Tumor suppressor gene 123181 ChimerSeq ChiTaRs ChiTaRs PTPRO-PTPRO PTPRO chr12 15622421 PTPRO chr12 15622548 Exonic hg19 NA T25328 Out-of-frame Intra-chr p12.3 p12.3 123182 ChimerSeq ChiTaRs ChiTaRs ACTG1-ACTG1 ACTG1 chr17 79477145 ACTG1 chr17 79477119 Exonic hg19 NA CD240358 Out-of-frame Intra-chr q25.3 q25.3 123183 ChimerSeq ChiTaRs ChiTaRs CTSH-CTSH CTSH chr15 79214175 CTSH chr15 79214162 Exonic hg19 NA CB243168 Out-of-frame Intra-chr q25.1 q25.1 123184 ChimerSeq ChiTaRs ChiTaRs PCNA-PCNA PCNA chr20 5095661 PCNA chr20 5095932 Exonic hg19 NA BM462208 Out-of-frame Intra-chr p12.3 p12.3 123185 ChimerSeq ChiTaRs ChiTaRs DDX24-DDX24 DDX24 chr14 94528563 DDX24 chr14 94528755 Exonic hg19 NA BP377968 Out-of-frame Intra-chr 123186 ChimerSeq ChiTaRs ChiTaRs PKMYT1-PAQR4 PKMYT1 chr16 3030464 PAQR4 chr16 3022820 Exonic hg19 NA AF014118 Out-of-frame Intra-chr p13.3 p13.3 123187 ChimerSeq ChiTaRs ChiTaRs EIF3L-LOC440934 EIF3L chr22 38273852 LOC440934 chr2 223186030 Exonic hg19 NA BF809008 Out-of-frame Inter-chr q13.1 123188 ChimerSeq ChiTaRs ChiTaRs SCN4A-SCN4A SCN4A chr17 62043501 SCN4A chr17 62049554 Exonic hg19 NA CD608178 Out-of-frame Intra-chr q23.3 q23.3 123189 ChimerSeq ChiTaRs ChiTaRs MYO1D-MSRA MYO1D chr17 31184346 MSRA chr8 10151304 Exonic hg19 NA AA654208 Out-of-frame Inter-chr q11.2 p23.1 123190 ChimerSeq ChiTaRs ChiTaRs POLG-POLG POLG chr15 89868223 POLG chr15 89867728 Exonic hg19 NA AW277008 Out-of-frame Intra-chr q26.1 q26.1 123191 ChimerSeq ChiTaRs ChiTaRs EP300-EP300 EP300 chr22 41575005 EP300 chr22 41574978 Exonic hg19 NA AW580958 Out-of-frame Intra-chr q13.2 Oncogene q13.2 Oncogene 123192 ChimerSeq ChiTaRs ChiTaRs C14orf37-DENR C14orf37 chr14 58753679 DENR chr12 123254309 Exonic hg19 NA BQ884188 Out-of-frame Inter-chr q23.1 q24.31 123193 ChimerSeq ChiTaRs ChiTaRs NFIX-NFIX NFIX chr19 13207764 NFIX chr19 13208525 Exonic hg19 NA AI817698 Out-of-frame Intra-chr p13.13 Transcription factor p13.13 Transcription factor 123194 ChimerSeq ChiTaRs ChiTaRs C17orf89-C17orf89 C17orf89 chr17 79213397 C17orf89 chr17 79214805 Exonic hg19 NA AW470858 Out-of-frame Intra-chr 123195 ChimerSeq ChiTaRs ChiTaRs PRMT5-DLG2 PRMT5 chr14 23398585 DLG2 chr11 85013461 Exonic hg19 NA DA812278 Out-of-frame Inter-chr q11.2 q14.1 123196 ChimerSeq ChiTaRs ChiTaRs THUMPD1-SIK2 THUMPD1 chr16 20750043 SIK2 chr11 111601294 Exonic hg19 NA BG988558 Out-of-frame Inter-chr p12.3 q23.1 123197 ChimerSeq ChiTaRs ChiTaRs HAUS2-HAUS2 HAUS2 chr15 42854545 HAUS2 chr15 42851445 Exonic hg19 NA BF091528 Out-of-frame Intra-chr q15.2 q15.2 123198 ChimerSeq ChiTaRs ChiTaRs DNAJA3-RAB5C DNAJA3 chr16 4505723 RAB5C chr17 40282464 Exonic hg19 NA BF093478 Out-of-frame Inter-chr Tumor suppressor gene q21.2 123199 ChimerSeq ChiTaRs ChiTaRs PLD2-SYTL1 PLD2 chr17 4721440 SYTL1 chr1 27675957 Exonic hg19 NA AI909908 Out-of-frame Inter-chr p13.2 p36.11 123200 ChimerSeq ChiTaRs ChiTaRs MBOAT7-MBOAT7 MBOAT7 chr19 54688505 MBOAT7 chr19 54690911 Exonic hg19 NA BF919648 Out-of-frame Intra-chr 123201 ChimerSeq ChiTaRs ChiTaRs SNHG11-PARP10 SNHG11 chr20 37076141 PARP10 chr8 145058971 Exonic hg19 NA DB040428 Out-of-frame Inter-chr q11.23 q24.3 123202 ChimerSeq ChiTaRs ChiTaRs MGAT3-TTC31 MGAT3 chr22 39886108 TTC31 chr2 74721605 Exonic hg19 NA DR422998 Out-of-frame Inter-chr q13.1 p13.1 123203 ChimerSeq ChiTaRs ChiTaRs MALAT1-CD59 MALAT1 chr11 65273497 CD59 chr11 33731360 Exonic hg19 NA BE837978 Out-of-frame Intra-chr q13.1 p13 123204 ChimerSeq ChiTaRs ChiTaRs CELF6-CELF6 CELF6 chr15 72595839 CELF6 chr15 72595765 Exonic hg19 NA BF359368 Out-of-frame Intra-chr q23 q23 123205 ChimerSeq ChiTaRs ChiTaRs CLIP1-TMEM161B CLIP1 chr12 122885399 TMEM161B chr5 87495115 Exonic hg19 NA BF800078 Out-of-frame Inter-chr q24.31 q14.3 123206 ChimerSeq ChiTaRs ChiTaRs FBXO7-FBXO7 FBXO7 chr22 32875262 FBXO7 chr22 32874968 Exonic hg19 NA AA569698 Out-of-frame Intra-chr q12.3 q12.3 123207 ChimerSeq ChiTaRs ChiTaRs FUT3-FUT3 FUT3 chr19 5851465 FUT3 chr19 5843610 Exonic hg19 NA AW375778 Out-of-frame Intra-chr p13.3 p13.3 123208 ChimerSeq ChiTaRs ChiTaRs IL4I1-IL4I1 IL4I1 chr19 50410436 IL4I1 chr19 50410082 Exonic hg19 NA AW020688 Out-of-frame Intra-chr q13.33 q13.33 123209 ChimerSeq ChiTaRs ChiTaRs ENTPD6-CGNL1 ENTPD6 chr20 25199246 CGNL1 chr15 57841123 Exonic hg19 NA DA046138 Out-of-frame Inter-chr p11.21 q21.3 123210 ChimerSeq ChiTaRs ChiTaRs SLC25A1-JUN SLC25A1 chr22 19165339 JUN chr1 59249388 Exonic hg19 NA CD614308 Out-of-frame Inter-chr q11.21 p32.1 Oncogene Transcription factor 123211 ChimerSeq ChiTaRs ChiTaRs DLG2-DLG2 DLG2 chr11 83937902 DLG2 chr11 83937130 Exonic hg19 NA CV410038 Out-of-frame Intra-chr q14.1 q14.1 123212 ChimerSeq ChiTaRs ChiTaRs ZFP1-NKTR ZFP1 chr16 75206132 NKTR chr3 42688630 Exonic hg19 NA AA013468 3'UTR-3'UTR Inter-chr q23.1 Transcription factor p22.1 123213 ChimerSeq ChiTaRs ChiTaRs SUPT5H-SUPT5H SUPT5H chr19 39948380 SUPT5H chr19 39957113 Exonic hg19 NA BM723368 Out-of-frame Intra-chr q13.2 q13.2 123214 ChimerSeq ChiTaRs ChiTaRs MED26-KIF18B MED26 chr19 16682389 KIF18B chr17 43002079 Exonic hg19 NA BC032658 Out-of-frame Inter-chr p13.11 q21.31 123215 ChimerSeq ChiTaRs ChiTaRs CBFA2T2-RTN4 CBFA2T2 chr20 32177472 RTN4 chr2 55213452 Exonic hg19 NA BE072318 Out-of-frame Inter-chr q11.21 p16.1 Tumor suppressor gene 123216 ChimerSeq ChiTaRs ChiTaRs SEMA4B-SEMA4B SEMA4B chr15 90749233 SEMA4B chr15 90748295 Exonic hg19 NA BE072539 Out-of-frame Intra-chr q26.1 q26.1 123217 ChimerSeq ChiTaRs ChiTaRs CEACAM5-PDE5A CEACAM5 chr19 42260645 PDE5A chr4 120432019 Exonic hg19 NA BG980189 Out-of-frame Inter-chr q13.2 q26 123218 ChimerSeq ChiTaRs ChiTaRs ARSA-ANKLE2 ARSA chr22 51066034 ANKLE2 chr12 133313420 Exonic hg19 NA BF898639 Out-of-frame Inter-chr q13.33 q24.33 123219 ChimerSeq ChiTaRs ChiTaRs STAT6-STAT6 STAT6 chr12 57504174 STAT6 chr12 57503814 Exonic hg19 NA BF854179 Out-of-frame Intra-chr q13.3 Transcription factor q13.3 Transcription factor 123220 ChimerSeq ChiTaRs ChiTaRs A2M-A2M A2M chr12 9248289 A2M chr12 9251205 Exonic hg19 NA BF880179 Out-of-frame Intra-chr p13.31 p13.31 123221 ChimerSeq ChiTaRs ChiTaRs CABP7-ZMAT5 CABP7 chr22 30134431 ZMAT5 chr22 30144447 Exonic hg19 NA AW881149 Out-of-frame Intra-chr q12.2 q12.2 123222 ChimerSeq ChiTaRs ChiTaRs POFUT1-PSEN1 POFUT1 chr20 30823618 PSEN1 chr14 73637638 Exonic hg19 NA AW374429 Out-of-frame Inter-chr q11.21 q24.2 123223 ChimerSeq ChiTaRs ChiTaRs MYO9B-MYO9B MYO9B chr19 17294799 MYO9B chr19 17298805 Exonic hg19 NA AI493469 Out-of-frame Intra-chr p13.11 p13.11 123224 ChimerSeq ChiTaRs ChiTaRs UMODL1-CAMTA1 UMODL1 chr21 43542800 CAMTA1 chr1 7553240 Exonic hg19 NA EL582679 Out-of-frame Inter-chr q22.3 p36.31 Tumor suppressor gene Transcription factor 123225 ChimerSeq ChiTaRs ChiTaRs STRAP-STRAP STRAP chr12 16056399 STRAP chr12 16055964 Exonic hg19 NA BU509169 Out-of-frame Intra-chr p12.3 p12.3 123226 ChimerSeq ChiTaRs ChiTaRs RAB6A-RAB6A RAB6A chr11 73417165 RAB6A chr11 73428060 Exonic hg19 NA N33989 Out-of-frame Intra-chr q13.4 q13.4 123227 ChimerSeq ChiTaRs ChiTaRs KRT13-FAM63B KRT13 chr17 39658715 FAM63B chr15 59068312 Exonic hg19 NA BF734819 Out-of-frame Inter-chr q21.2 123228 ChimerSeq ChiTaRs ChiTaRs MALAT1-OST4 MALAT1 chr11 65269435 OST4 chr2 27294250 Exonic hg19 NA CB144939 Out-of-frame Inter-chr q13.1 p23.3 123229 ChimerSeq ChiTaRs ChiTaRs GNPNAT1-GNPNAT1 GNPNAT1 chr14 53257308 GNPNAT1 chr14 53257647 Exonic hg19 NA AI904839 Out-of-frame Intra-chr q22.1 q22.1 123230 ChimerSeq ChiTaRs ChiTaRs FUS-SRR FUS chr16 31202923 SRR chr17 2208426 Exonic hg19 NA AA614279 Out-of-frame Inter-chr p11.2 Tumor suppressor gene p13.3 123231 ChimerSeq ChiTaRs ChiTaRs MEGF11-RPL30 MEGF11 chr15 66459306 RPL30 chr8 99054942 Exonic hg19 NA BF923959 Out-of-frame Inter-chr q22.31 q22.2 123232 ChimerSeq ChiTaRs ChiTaRs NUMB-SRP14 NUMB chr14 73759574 SRP14 chr15 40331128 Exonic hg19 NA BE836999 Out-of-frame Inter-chr q24.3 Tumor suppressor gene q15.1 123233 ChimerSeq ChiTaRs ChiTaRs CRKL-SPTBN1 CRKL chr22 21307483 SPTBN1 chr2 54896515 Exonic hg19 NA AW608839 Out-of-frame Inter-chr q11.21 Oncogene p16.2 Tumor suppressor gene 123234 ChimerSeq ChiTaRs ChiTaRs ANP32A-C1orf87 ANP32A chr15 69071952 C1orf87 chr1 60458727 Exonic hg19 NA T20169 Out-of-frame Inter-chr q23 Tumor suppressor gene p32.1 123235 ChimerSeq ChiTaRs ChiTaRs RNF40-RNF40 RNF40 chr16 30786078 RNF40 chr16 30780289 Exonic hg19 NA BI026569 Out-of-frame Intra-chr p11.2 p11.2 123236 ChimerSeq ChiTaRs ChiTaRs PPP6R3-PREPL PPP6R3 chr11 68287058 PREPL chr2 44550426 Exonic hg19 NA DA402969 Out-of-frame Inter-chr q13.2 p21 123237 ChimerSeq ChiTaRs ChiTaRs C11orf84-C11orf84 C11orf84 chr11 63595187 C11orf84 chr11 63585486 Exonic hg19 NA AI087989 Out-of-frame Intra-chr q13.1 q13.1 123238 ChimerSeq ChiTaRs ChiTaRs CNPY2-CNPY2 CNPY2 chr12 56704772 CNPY2 chr12 56704256 Exonic hg19 NA AL831869 Out-of-frame Intra-chr q13.3 q13.3 123239 ChimerSeq ChiTaRs ChiTaRs TCHP-TCHP TCHP chr12 110346742 TCHP chr12 110355234 Exonic hg19 NA CB158699 CDS-3'UTR Intra-chr q24.11 Tumor suppressor gene q24.11 Tumor suppressor gene 123240 ChimerSeq ChiTaRs ChiTaRs IFT88-IFT88 IFT88 chr13 21238908 IFT88 chr13 21239690 Exonic hg19 NA AI621229 Out-of-frame Intra-chr q12.11 Tumor suppressor gene q12.11 Tumor suppressor gene 123241 ChimerSeq ChiTaRs ChiTaRs MRPS35-CSTA MRPS35 chr12 27909002 CSTA chr3 122060371 Exonic hg19 NA BE840739 Out-of-frame Inter-chr p11.22 q21.1 123242 ChimerSeq ChiTaRs ChiTaRs LOC643339-MYO1F LOC643339 chr12 93945632 MYO1F chr19 8619513 Exonic hg19 NA BE166689 Out-of-frame Inter-chr p13.2 123243 ChimerSeq ChiTaRs ChiTaRs SHC4-SHC4 SHC4 chr15 49171671 SHC4 chr15 49171646 Exonic hg19 NA AA888309 Out-of-frame Intra-chr q21.1 q21.1 123244 ChimerSeq ChiTaRs ChiTaRs ABHD17C-PTOV1 ABHD17C chr15 81047724 PTOV1 chr19 50359729 Exonic hg19 NA BX505939 Out-of-frame Inter-chr q25.1 q13.33 123245 ChimerSeq ChiTaRs ChiTaRs PYGB-TMEM53 PYGB chr20 25266394 TMEM53 chr1 45120425 Exonic hg19 NA BE696989 Out-of-frame Inter-chr p11.21 p34.1 123246 ChimerSeq ChiTaRs ChiTaRs RALBP1-RALBP1 RALBP1 chr18 9518009 RALBP1 chr18 9517994 Exonic hg19 NA BU193289 Out-of-frame Intra-chr p11.22 p11.22 123247 ChimerSeq ChiTaRs ChiTaRs DAPK2-DAPK2 DAPK2 chr15 64204020 DAPK2 chr15 64203809 Exonic hg19 NA BI035829 Out-of-frame Intra-chr q22.31 CAMK:DAPK Tumor suppressor gene q22.31 CAMK:DAPK Tumor suppressor gene 123248 ChimerSeq ChiTaRs ChiTaRs CKB-CKB CKB chr14 103986264 CKB chr14 103986820 Exonic hg19 NA BM690229 Out-of-frame Intra-chr q32.33 q32.33 123249 ChimerSeq ChiTaRs ChiTaRs MCAM-SKP2 MCAM chr11 119187818 SKP2 chr5 36183634 Exonic hg19 NA BC006329 Out-of-frame Inter-chr q23.3 p13.2 Tumor suppressor gene 123250 ChimerSeq ChiTaRs ChiTaRs HIF1A-NRP1 HIF1A chr14 62187250 NRP1 chr10 33467838 Exonic hg19 NA DA461349 Out-of-frame Inter-chr q23.2 Oncogene Tumor suppressor gene Transcription factor p11.22 123251 ChimerSeq ChiTaRs ChiTaRs LARGE-LARGE LARGE chr22 33670091 LARGE chr22 33669371 Exonic hg19 NA BF308339 Out-of-frame Intra-chr 123252 ChimerSeq ChiTaRs ChiTaRs LENG8-LENG8 LENG8 chr19 54969575 LENG8 chr19 54960402 Exonic hg19 NA AB067519 Out-of-frame Intra-chr 123253 ChimerSeq ChiTaRs ChiTaRs DBNDD1-NAA60 DBNDD1 chr16 90072311 NAA60 chr16 3533508 Exonic hg19 NA BF733969 Out-of-frame Intra-chr q24.3 p13.3 123254 ChimerSeq ChiTaRs ChiTaRs TAGLN-TAGLN TAGLN chr11 117075118 TAGLN chr11 117075239 Exonic hg19 NA W24169 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene 123255 ChimerSeq ChiTaRs ChiTaRs GRN-ST6GAL1 GRN chr17 42430470 ST6GAL1 chr3 186760877 Exonic hg19 NA AI032739 3'UTR-CDS Inter-chr q21.31 q27.3 123256 ChimerSeq ChiTaRs ChiTaRs MALAT1-PCCA MALAT1 chr11 65272331 PCCA chr13 101171483 Exonic hg19 NA BF811509 Out-of-frame Inter-chr q13.1 q32.3 123257 ChimerSeq ChiTaRs ChiTaRs EIF3D-S100A2 EIF3D chr22 36912655 S100A2 chr1 153533821 Exonic hg19 NA BE122809 Out-of-frame Inter-chr q12.3 q21.3 Tumor suppressor gene 123258 ChimerSeq ChiTaRs ChiTaRs TTC12-TTC12 TTC12 chr11 113219637 TTC12 chr11 113219646 Exonic hg19 NA AA593089 Out-of-frame Intra-chr q23.2 q23.2 123259 ChimerSeq ChiTaRs ChiTaRs MALAT1-RAD21L1 MALAT1 chr11 65266742 RAD21L1 chr20 1225466 Exonic hg19 NA DA647149 Out-of-frame Inter-chr q13.1 p13 123260 ChimerSeq ChiTaRs ChiTaRs TRIB3-WASF2 TRIB3 chr20 377410 WASF2 chr1 27783598 Exonic hg19 NA U02019 Out-of-frame Inter-chr p13 p36.11 123261 ChimerSeq ChiTaRs ChiTaRs LDLR-ANKRD11 LDLR chr19 11237581 ANKRD11 chr16 89481292 Exonic hg19 NA BF753479 Out-of-frame Inter-chr p13.2 q24.3 123262 ChimerSeq ChiTaRs ChiTaRs LPCAT2-LPCAT2 LPCAT2 chr16 55618783 LPCAT2 chr16 55618734 Exonic hg19 NA CN286009 Out-of-frame Intra-chr q12.2 q12.2 123263 ChimerSeq ChiTaRs ChiTaRs ANO6-ANO6 ANO6 chr12 45824223 ANO6 chr12 45814896 Exonic hg19 NA BG314859 Out-of-frame Intra-chr q12 q12 123264 ChimerSeq ChiTaRs ChiTaRs STAT5B-NCOA3 STAT5B chr17 40362610 NCOA3 chr20 46269913 Exonic hg19 NA BP292769 Out-of-frame Inter-chr q21.2 Transcription factor q13.12 Transcription factor 123265 ChimerSeq ChiTaRs ChiTaRs ISLR-FAM219A ISLR chr15 74468481 FAM219A chr9 34426791 Exonic hg19 NA BE707929 Out-of-frame Inter-chr q24.1 p13.3 123266 ChimerSeq ChiTaRs ChiTaRs LYZ-DDOST LYZ chr12 69747637 DDOST chr1 20978613 Exonic hg19 NA AW467499 Out-of-frame Inter-chr q15 p36.12 123267 ChimerSeq ChiTaRs ChiTaRs PRPF40B-PRPF40B PRPF40B chr12 50033178 PRPF40B chr12 50032218 Exonic hg19 NA AA481099 Out-of-frame Intra-chr q13.12 q13.12 123268 ChimerSeq ChiTaRs ChiTaRs RTF1-RTF1 RTF1 chr15 41757004 RTF1 chr15 41769364 Exonic hg19 NA BQ775869 Out-of-frame Intra-chr q15.1 q15.1 123269 ChimerSeq ChiTaRs ChiTaRs DENND4A-DENND4A DENND4A chr15 66060411 DENND4A chr15 66060284 Exonic hg19 NA AW888369 Out-of-frame Intra-chr q22.31 q22.31 123270 ChimerSeq ChiTaRs ChiTaRs PTPRM-PSG3 PTPRM chr18 8266020 PSG3 chr19 43414884 Exonic hg19 NA BF086749 Out-of-frame Inter-chr p11.23 q13.2 123271 ChimerSeq ChiTaRs ChiTaRs DCAF7-DCAF7 DCAF7 chr17 61670830 DCAF7 chr17 61666801 Exonic hg19 NA DB292839 Out-of-frame Intra-chr q23.3 q23.3 123272 ChimerSeq ChiTaRs ChiTaRs LMF2-ARPC4 LMF2 chr22 50944877 ARPC4 chr3 9848363 Exonic hg19 NA BQ336059 Out-of-frame Inter-chr q13.33 p25.3 123273 ChimerSeq ChiTaRs ChiTaRs SMAGP-GTPBP2 SMAGP chr12 51663991 GTPBP2 chr6 43593571 Exonic hg19 NA DB445779 Out-of-frame Inter-chr q13.13 p21.1 123274 ChimerSeq ChiTaRs ChiTaRs EP400-LMO4 EP400 chr12 132539354 LMO4 chr1 87810848 Exonic hg19 NA AK097299 Out-of-frame Inter-chr q24.33 Oncogene p22.3 123275 ChimerSeq ChiTaRs ChiTaRs RNF214-TSN RNF214 chr11 117109827 TSN chr2 122516311 Exonic hg19 NA AW802669 Out-of-frame Inter-chr q23.3 q14.3 123276 ChimerSeq ChiTaRs ChiTaRs MGAT4C-GRM4 MGAT4C chr12 87168349 GRM4 chr6 33990485 Exonic hg19 NA T08449 Out-of-frame Inter-chr p21.31 123277 ChimerSeq ChiTaRs ChiTaRs NOC4L-RAB3GAP2 NOC4L chr12 132635587 RAB3GAP2 chr1 220323465 Exonic hg19 NA AK074489 Out-of-frame Inter-chr q24.33 q41 123278 ChimerSeq ChiTaRs ChiTaRs PRPF8-PEX1 PRPF8 chr17 1577776 PEX1 chr7 92122461 Exonic hg19 NA AA491159 Out-of-frame Inter-chr q21.2 123279 ChimerSeq ChiTaRs ChiTaRs ORAOV1-ZBTB8B ORAOV1 chr11 69481244 ZBTB8B chr1 32972731 Exonic hg19 NA BE142879 Out-of-frame Inter-chr q13.3 p35.1 Transcription factor 123280 ChimerSeq ChiTaRs ChiTaRs ZCCHC14-ZCCHC14 ZCCHC14 chr16 87445203 ZCCHC14 chr16 87443827 Exonic hg19 NA AL044069 Out-of-frame Intra-chr q24.2 q24.2 123281 ChimerSeq ChiTaRs ChiTaRs OPRL1-RUSC1 OPRL1 chr20 62728090 RUSC1 chr1 155300751 Exonic hg19 NA BI051049 Out-of-frame Inter-chr q22 123282 ChimerSeq ChiTaRs ChiTaRs COL4A1-COL4A1 COL4A1 chr13 110801835 COL4A1 chr13 110801827 Exonic hg19 NA BF911869 Out-of-frame Intra-chr q34 q34 123283 ChimerSeq ChiTaRs ChiTaRs NF1-SUPT6H NF1 chr17 29624257 SUPT6H chr17 27022348 Exonic hg19 NA DA165529 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene q11.2 123284 ChimerSeq ChiTaRs ChiTaRs NEAT1-IFNAR2 NEAT1 chr11 65208074 IFNAR2 chr21 34609858 Exonic hg19 NA BF848469 Out-of-frame Inter-chr q13.1 q22.11 123285 ChimerSeq ChiTaRs ChiTaRs DIDO1-LOC100507351 DIDO1 chr20 61536671 LOC100507351 chr17 75551821 Exonic hg19 NA BF223109 Out-of-frame Inter-chr q13.33 Tumor suppressor gene 123286 ChimerSeq ChiTaRs ChiTaRs TUG1-ACOX1 TUG1 chr22 31372067 ACOX1 chr17 73970159 Exonic hg19 NA AK025129 Out-of-frame Inter-chr q12.2 q25.1 123287 ChimerSeq ChiTaRs ChiTaRs ACACB-CTDSP1 ACACB chr12 109706031 CTDSP1 chr2 219270373 Exonic hg19 NA BM989099 Out-of-frame Inter-chr q24.11 q35 123288 ChimerSeq ChiTaRs ChiTaRs COL6A2-CAND2 COL6A2 chr21 47552763 CAND2 chr3 12858206 Exonic hg19 NA AI093179 3'UTR-CDS Inter-chr q22.3 p25.2 123289 ChimerSeq ChiTaRs ChiTaRs SMAD3-AAGAB SMAD3 chr15 67462942 AAGAB chr15 67500912 Exonic hg19 NA CX866999 Out-of-frame Intra-chr q22.33 Transcription factor q23 Seq+ 123290 ChimerSeq ChiTaRs ChiTaRs MLST8-FOXRED2 MLST8 chr16 2258580 FOXRED2 chr22 36887398 Exonic hg19 NA BF813029 Out-of-frame Inter-chr p13.3 q12.3 123291 ChimerSeq ChiTaRs ChiTaRs NOL3-PLEKHA2 NOL3 chr16 67209624 PLEKHA2 chr8 38803684 Exonic hg19 NA AA962119 Out-of-frame Inter-chr q22.1 p11.22 123292 ChimerSeq ChiTaRs ChiTaRs FLI1-EWSR1 FLI1 chr11 128678882 EWSR1 chr22 29684048 Exonic hg19 NA JX266514 Out-of-frame Inter-chr q24.3 Oncogene Transcription factor q12.2 KB Pub 123293 ChimerSeq ChiTaRs ChiTaRs CRTAM-ACTG1 CRTAM chr11 122743347 ACTG1 chr17 79478619 Exonic hg19 NA BG272679 3'UTR-3'UTR Inter-chr q24.1 q25.3 123294 ChimerSeq ChiTaRs ChiTaRs NFRKB-NFRKB NFRKB chr11 129739601 NFRKB chr11 129734294 Exonic hg19 NA BE005889 Out-of-frame Intra-chr q24.3 q24.3 123295 ChimerSeq ChiTaRs ChiTaRs PRKCSH-PRKCSH PRKCSH chr19 11560138 PRKCSH chr19 11547220 Exonic hg19 NA AU120749 Out-of-frame Intra-chr p13.2 p13.2 123296 ChimerSeq ChiTaRs ChiTaRs BIRC2-TTC17 BIRC2 chr11 102248448 TTC17 chr11 43514845 Exonic hg19 NA AF207599 Out-of-frame Intra-chr q22.2 Oncogene p12 123297 ChimerSeq ChiTaRs ChiTaRs TAF4-TAF4 TAF4 chr20 60551132 TAF4 chr20 60572642 Exonic hg19 NA BE074659 Out-of-frame Intra-chr 123298 ChimerSeq ChiTaRs ChiTaRs PLK1-PLK1 PLK1 chr16 23695360 PLK1 chr16 23700558 Exonic hg19 NA BI033419 Out-of-frame Intra-chr p12.2 Other:PLK Tumor suppressor gene p12.2 Other:PLK Tumor suppressor gene 123299 ChimerSeq ChiTaRs ChiTaRs PPHLN1-PPHLN1 PPHLN1 chr12 42835343 PPHLN1 chr12 42781269 Exonic hg19 NA CA418369 Out-of-frame Intra-chr q12 q12 123300 ChimerSeq ChiTaRs ChiTaRs RABEP1-EIF4G1 RABEP1 chr17 5281981 EIF4G1 chr3 184039456 Exonic hg19 NA BE501999 Out-of-frame Inter-chr p13.2 q27.1 123301 ChimerSeq ChiTaRs ChiTaRs SNRPN-SNRPN SNRPN chr15 25584038 SNRPN chr15 25616632 Exonic hg19 NA DA881059 Out-of-frame Intra-chr q11.2 q11.2 123302 ChimerSeq ChiTaRs ChiTaRs MYH9-PSME1 MYH9 chr22 36682855 PSME1 chr14 24606350 Exonic hg19 NA BG979539 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene q12 123303 ChimerSeq ChiTaRs ChiTaRs SLC41A2-GGA1 SLC41A2 chr12 105198498 GGA1 chr22 38029514 Exonic hg19 NA BG169689 Out-of-frame Inter-chr q23.3 q13.1 123304 ChimerSeq ChiTaRs ChiTaRs NEAT1-PLEC NEAT1 chr11 65195758 PLEC chr8 144989451 Exonic hg19 NA BF739409 Out-of-frame Inter-chr q13.1 q24.3 123305 ChimerSeq ChiTaRs ChiTaRs RPL23-MED30 RPL23 chr17 37008951 MED30 chr8 118545351 Exonic hg19 NA BY999398 Out-of-frame Inter-chr q12 q24.11 123306 ChimerSeq ChiTaRs ChiTaRs PDXDC1-BRK1 PDXDC1 chr16 15078195 BRK1 chr3 10157381 Exonic hg19 NA AF281279 Out-of-frame Inter-chr p13.11 p25.3 123307 ChimerSeq ChiTaRs ChiTaRs TPM1-NMNAT1 TPM1 chr15 63349095 NMNAT1 chr1 10009046 Exonic hg19 NA BQ372419 Out-of-frame Inter-chr q22.2 p36.22 123308 ChimerSeq ChiTaRs ChiTaRs ENO3-VIM ENO3 chr17 4857622 VIM chr10 17277580 Exonic hg19 NA CV314769 Out-of-frame Inter-chr p13.2 p13 Tumor suppressor gene 123309 ChimerSeq ChiTaRs ChiTaRs PDK2-PDK2 PDK2 chr17 48188422 PDK2 chr17 48183275 Exonic hg19 NA BE504969 Out-of-frame Intra-chr q21.33 q21.33 123310 ChimerSeq ChiTaRs ChiTaRs LRRC29-TMC5 LRRC29 chr16 67260079 TMC5 chr16 19490317 Exonic hg19 NA BF372779 Out-of-frame Intra-chr q22.1 p12.3 123311 ChimerSeq ChiTaRs ChiTaRs TEX22-PLEKHG2 TEX22 chr14 105867648 PLEKHG2 chr19 39914534 Exonic hg19 NA BU687679 Out-of-frame Inter-chr q32.33 q13.2 123312 ChimerSeq ChiTaRs ChiTaRs SERPINA3-SERPINA3 SERPINA3 chr14 95081367 SERPINA3 chr14 95085704 Exonic hg19 NA BF924119 Out-of-frame Intra-chr q32.13 q32.13 123313 ChimerSeq ChiTaRs ChiTaRs RBFA-RBFA RBFA chr18 77806397 RBFA chr18 77805756 Exonic hg19 NA BE669569 Out-of-frame Intra-chr q23 q23 123314 ChimerSeq ChiTaRs ChiTaRs UBE2V1-UBE2V1 UBE2V1 chr20 48709932 UBE2V1 chr20 48709900 Exonic hg19 NA AW807819 Out-of-frame Intra-chr q13.13 q13.13 123315 ChimerSeq ChiTaRs ChiTaRs CFL2-NOSTRIN CFL2 chr14 35180290 NOSTRIN chr2 169673384 Exonic hg19 NA R11359 Out-of-frame Inter-chr q13.1 123316 ChimerSeq ChiTaRs ChiTaRs BACE2-RGL1 BACE2 chr21 42648155 RGL1 chr1 183786141 Exonic hg19 NA AW993289 Out-of-frame Inter-chr q22.2 q25.3 123317 ChimerSeq ChiTaRs ChiTaRs ST8SIA2-ST8SIA2 ST8SIA2 chr15 92960915 ST8SIA2 chr15 92964240 Exonic hg19 NA AA668689 Out-of-frame Intra-chr q26.1 q26.1 123318 ChimerSeq ChiTaRs ChiTaRs LUC7L3-LOC550643 LUC7L3 chr17 48817708 LOC550643 chrX 56843916 Exonic hg19 NA CA337109 Out-of-frame Inter-chr q21.33 123319 ChimerSeq ChiTaRs ChiTaRs TMPRSS3-MYO5B TMPRSS3 chr21 43803309 MYO5B chr18 47500772 Exonic hg19 NA BG874549 Out-of-frame Inter-chr q22.3 q21.1 123320 ChimerSeq ChiTaRs ChiTaRs CLPB-CABP4 CLPB chr11 72003817 CABP4 chr11 67223119 Exonic hg19 NA BX954309 Out-of-frame Intra-chr q13.4 q13.2 123321 ChimerSeq ChiTaRs ChiTaRs MAP1A-WDR31 MAP1A chr15 43814299 WDR31 chr9 116077949 Exonic hg19 NA BC019869 Out-of-frame Inter-chr q15.3 q32 123322 ChimerSeq ChiTaRs ChiTaRs ELL3-LRWD1 ELL3 chr15 44087284 LRWD1 chr7 102113562 Exonic hg19 NA BG255749 Out-of-frame Inter-chr q15.3 q22.1 123323 ChimerSeq ChiTaRs ChiTaRs METAP2-WDR61 METAP2 chr12 95907878 WDR61 chr15 78578361 Exonic hg19 NA BE929899 Out-of-frame Inter-chr q22 q25.1 123324 ChimerSeq ChiTaRs ChiTaRs ERBB3-DOCK9 ERBB3 chr12 56495805 DOCK9 chr13 99457392 Exonic hg19 NA BG992869 Out-of-frame Inter-chr q13.2 Oncogene q32.3 123325 ChimerSeq ChiTaRs ChiTaRs ATXN10-ATXN10 ATXN10 chr22 46181871 ATXN10 chr22 46181941 Exonic hg19 NA CV361289 Out-of-frame Intra-chr q13.31 q13.31 123326 ChimerSeq ChiTaRs ChiTaRs MIRLET7BHG-ABHD17C MIRLET7BHG chr22 46503653 ABHD17C chr15 80997744 Exonic hg19 NA BF762619 Out-of-frame Inter-chr q13.31 q25.1 123327 ChimerSeq ChiTaRs ChiTaRs NSRP1-FLJ43681 NSRP1 chr17 28504407 FLJ43681 chr17 81177021 Exonic hg19 NA BQ012819 Out-of-frame Intra-chr q11.2 123328 ChimerSeq ChiTaRs ChiTaRs GNA13-PHF21A GNA13 chr17 63039408 PHF21A chr11 46105721 Exonic hg19 NA AI093849 Out-of-frame Inter-chr q24.1 p11.2 Transcription factor 123329 ChimerSeq ChiTaRs ChiTaRs MPST-WAS MPST chr22 37425856 WAS chrX 48547792 Exonic hg19 NA CB157649 Out-of-frame Inter-chr q12.3 p11.23 Oncogene 123330 ChimerSeq ChiTaRs ChiTaRs KIAA1731-XKR6 KIAA1731 chr11 93455032 XKR6 chr8 10988036 Exonic hg19 NA AW409199 Out-of-frame Inter-chr p23.1 123331 ChimerSeq ChiTaRs ChiTaRs PSTPIP2-KMO PSTPIP2 chr18 43563809 KMO chr1 241720844 Exonic hg19 NA AI819879 Out-of-frame Inter-chr q21.1 q43 123332 ChimerSeq ChiTaRs ChiTaRs GGT7-PIGC GGT7 chr20 33444310 PIGC chr1 172411581 Exonic hg19 NA BI043619 Out-of-frame Inter-chr q11.22 q24.3 123333 ChimerSeq ChiTaRs ChiTaRs CHRNA3-CHRNA3 CHRNA3 chr15 78888750 CHRNA3 chr15 78893670 Exonic hg19 NA BM728759 Out-of-frame Intra-chr q25.1 q25.1 123334 ChimerSeq ChiTaRs ChiTaRs TLN2-TLN2 TLN2 chr15 63135318 TLN2 chr15 63135362 Exonic hg19 NA AW391929 Out-of-frame Intra-chr q22.2 q22.2 123335 ChimerSeq ChiTaRs ChiTaRs PCBP2-PCBP2 PCBP2 chr12 53861077 PCBP2 chr12 53862226 Exonic hg19 NA AW993599 Out-of-frame Intra-chr q13.13 q13.13 123336 ChimerSeq ChiTaRs ChiTaRs NEK9-NEK9 NEK9 chr14 75550183 NEK9 chr14 75549876 Exonic hg19 NA BF994799 Out-of-frame Intra-chr q24.3 Other:NEK q24.3 Other:NEK 123337 ChimerSeq ChiTaRs ChiTaRs LHFP-ZC3H12C LHFP chr13 40073054 ZC3H12C chr11 109994979 Exonic hg19 NA BE159909 Out-of-frame Inter-chr q14.11 q22.3 123338 ChimerSeq ChiTaRs ChiTaRs MLF2-MYOT MLF2 chr12 6875896 MYOT chr5 137088510 Exonic hg19 NA BM806519 Out-of-frame Inter-chr p13.31 q31.2 123339 ChimerSeq ChiTaRs ChiTaRs DIXDC1-MCF2 DIXDC1 chr11 111817226 MCF2 chrX 138663930 Exonic hg19 NA AB209679 Out-of-frame Inter-chr q23.1 q27.1 123340 ChimerSeq ChiTaRs ChiTaRs PPP6R2-INTS3 PPP6R2 chr22 50881727 INTS3 chr1 153736328 Exonic hg19 NA BE932669 Out-of-frame Inter-chr q13.33 q21.3 123341 ChimerSeq ChiTaRs ChiTaRs ECH1-ECH1 ECH1 chr19 39306170 ECH1 chr19 39306344 Exonic hg19 NA BF911179 Out-of-frame Intra-chr 123342 ChimerSeq ChiTaRs ChiTaRs GNAL-GNAL GNAL chr18 11852250 GNAL chr18 11851484 Exonic hg19 NA BX507339 Out-of-frame Intra-chr p11.21 p11.21 123343 ChimerSeq ChiTaRs ChiTaRs SYNE2-MUC12 SYNE2 chr14 64613691 MUC12 chr7 100657290 Exonic hg19 NA AW603439 Out-of-frame Inter-chr q23.2 q22.1 123344 ChimerSeq ChiTaRs ChiTaRs RHBDD3-GRB2 RHBDD3 chr22 29656498 GRB2 chr17 73314607 Exonic hg19 NA BG676409 Out-of-frame Inter-chr q12.2 q25.1 123345 ChimerSeq ChiTaRs ChiTaRs CFDP1-SLC6A9 CFDP1 chr16 75446525 SLC6A9 chr1 44490914 Exonic hg19 NA BE829689 Out-of-frame Inter-chr q23.1 p34.1 123346 ChimerSeq ChiTaRs ChiTaRs SIN3A-ZNF577 SIN3A chr15 75684925 ZNF577 chr19 52376648 Exonic hg19 NA BQ346619 Out-of-frame Inter-chr q24.2 q13.41 Transcription factor 123347 ChimerSeq ChiTaRs ChiTaRs PRR24-RPSA PRR24 chr19 47778948 RPSA chr19 24009899 Exonic hg19 NA BC084569 Out-of-frame Intra-chr p22.1 123348 ChimerSeq ChiTaRs ChiTaRs SIK3-LOC550643 SIK3 chr11 116882054 LOC550643 chrX 56784774 Exonic hg19 NA BF923009 Out-of-frame Inter-chr q23.3 123349 ChimerSeq ChiTaRs ChiTaRs MLL-LOC100506730 MLL chr11 118356100 LOC100506730 chr1 19620490 Exonic hg19 NA AY839732 Out-of-frame Inter-chr q23.3 123350 ChimerSeq ChiTaRs ChiTaRs DLK1-DLK1 DLK1 chr14 101200514 DLK1 chr14 101193363 Exonic hg19 NA BF791649 Out-of-frame Intra-chr q32.2 Tumor suppressor gene q32.2 Tumor suppressor gene 123351 ChimerSeq ChiTaRs ChiTaRs TNRC6A-TNRC6A TNRC6A chr16 24780527 TNRC6A chr16 24780275 Exonic hg19 NA AA501799 Out-of-frame Intra-chr p12.1 p12.1 123352 ChimerSeq ChiTaRs ChiTaRs KCNC3-SMG1 KCNC3 chr19 50822141 SMG1 chr16 18816846 Exonic hg19 NA DA571449 Out-of-frame Inter-chr q13.33 p12.3 Atypical:PIKK 123353 ChimerSeq ChiTaRs ChiTaRs IFT140-IFT140 IFT140 chr16 1585057 IFT140 chr16 1591263 Exonic hg19 NA AI651969 Out-of-frame Intra-chr p13.3 p13.3 123354 ChimerSeq ChiTaRs ChiTaRs TSPAN31-PAK3 TSPAN31 chr12 58141952 PAK3 chrX 110377022 Exonic hg19 NA AB209699 Out-of-frame Inter-chr q14.1 q23 STE:STE20 Oncogene 123355 ChimerSeq ChiTaRs ChiTaRs PNN-PNN PNN chr14 39649924 PNN chr14 39650347 Exonic hg19 NA BQ774709 Out-of-frame Intra-chr q21.1 Tumor suppressor gene q21.1 Tumor suppressor gene 123356 ChimerSeq ChiTaRs ChiTaRs GNB3-INTS9 GNB3 chr12 6956557 INTS9 chr8 28654233 Exonic hg19 NA BM665849 3'UTR-3'UTR Inter-chr p13.31 p21.1 123357 ChimerSeq ChiTaRs ChiTaRs NEAT1-C4orf19 NEAT1 chr11 65191803 C4orf19 chr4 37570178 Exonic hg19 NA CV372969 Out-of-frame Inter-chr q13.1 p14 123358 ChimerSeq ChiTaRs ChiTaRs SMOC1-JAK1 SMOC1 chr14 70430816 JAK1 chr1 65391313 Exonic hg19 NA BG005479 Out-of-frame Inter-chr q24.2 p31.3 TK:JakA Oncogene 123359 ChimerSeq ChiTaRs ChiTaRs TMEM117-BLVRA TMEM117 chr12 44488753 BLVRA chr7 43807329 Exonic hg19 NA BF744129 Out-of-frame Inter-chr q12 p13 123360 ChimerSeq ChiTaRs ChiTaRs RAB3IP-RAB3IP RAB3IP chr12 70189124 RAB3IP chr12 70206571 Exonic hg19 NA BQ375809 Out-of-frame Intra-chr q15 q15 123361 ChimerSeq ChiTaRs ChiTaRs RALY-LOC550643 RALY chr20 32667763 LOC550643 chrX 56755713 Exonic hg19 NA BF765409 Out-of-frame Inter-chr q11.22 123362 ChimerSeq ChiTaRs ChiTaRs VPS37B-RNH1 VPS37B chr12 123350276 RNH1 chr11 502141 Exonic hg19 NA BF922979 Out-of-frame Inter-chr q24.31 Tumor suppressor gene 123363 ChimerSeq ChiTaRs ChiTaRs DTNA-DTNA DTNA chr18 32446469 DTNA chr18 32446520 Exonic hg19 NA AA322169 Out-of-frame Intra-chr q12.1 q12.1 123364 ChimerSeq ChiTaRs ChiTaRs ATF5-UBE2V1 ATF5 chr19 50437190 UBE2V1 chr20 48698315 Exonic hg19 NA AW248949 Out-of-frame Inter-chr q13.33 Transcription factor q13.13 123365 ChimerSeq ChiTaRs ChiTaRs RRP7B-KAT6B RRP7B chr22 42978029 KAT6B chr10 76790504 Exonic hg19 NA EB387399 Out-of-frame Inter-chr Oncogene 123366 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65273940 MALAT1 chr11 65272500 Exonic hg19 NA CA424749 Out-of-frame Intra-chr q13.1 q13.1 123367 ChimerSeq ChiTaRs ChiTaRs B2M-GNB2L1 B2M chr15 45003793 GNB2L1 chr5 180663999 Exonic hg19 NA BP428649 Out-of-frame Inter-chr Oncogene Tumor suppressor gene 123368 ChimerSeq ChiTaRs ChiTaRs WFDC2-WFDC2 WFDC2 chr20 44108665 WFDC2 chr20 44108651 Exonic hg19 NA AA406009 Out-of-frame Intra-chr q13.12 q13.12 123369 ChimerSeq ChiTaRs ChiTaRs GALNT6-GALNT6 GALNT6 chr12 51751944 GALNT6 chr12 51747902 Exonic hg19 NA AI909009 Out-of-frame Intra-chr q13.13 q13.13 123370 ChimerSeq ChiTaRs ChiTaRs ZCCHC2-SLC25A14 ZCCHC2 chr18 60245812 SLC25A14 chrX 129506933 Exonic hg19 NA AI968179 Out-of-frame Inter-chr q21.33 q26.1 123371 ChimerSeq ChiTaRs ChiTaRs ACTR6-ACTR6 ACTR6 chr12 100604247 ACTR6 chr12 100602781 Exonic hg19 NA BX103169 Out-of-frame Intra-chr q23.1 q23.1 123372 ChimerSeq ChiTaRs ChiTaRs PGP-CSNK1D PGP chr16 2264838 CSNK1D chr17 80202238 Exonic hg19 NA BC080619 Out-of-frame Inter-chr p13.3 q25.3 123373 ChimerSeq ChiTaRs ChiTaRs MAN2C1-MAN2C1 MAN2C1 chr15 75653029 MAN2C1 chr15 75653658 Exonic hg19 NA BE935269 Out-of-frame Intra-chr q24.2 q24.2 123374 ChimerSeq ChiTaRs ChiTaRs ERCC1-TNRC18 ERCC1 chr19 45977366 TNRC18 chr7 5393973 Exonic hg19 NA BF853129 Out-of-frame Inter-chr q13.32 Oncogene p22.1 123375 ChimerSeq ChiTaRs ChiTaRs RMST-NEGR1 RMST chr12 97871971 NEGR1 chr1 72163670 Exonic hg19 NA BG193769 Out-of-frame Inter-chr q23.1 p31.1 123376 ChimerSeq ChiTaRs ChiTaRs RBFOX3-RYR2 RBFOX3 chr17 77478608 RYR2 chr1 237431814 Exonic hg19 NA CR748559 Out-of-frame Inter-chr q25.3 q43 123377 ChimerSeq ChiTaRs ChiTaRs RPL3-STX11 RPL3 chr22 39710841 STX11 chr6 144483951 Exonic hg19 NA BF360749 Out-of-frame Inter-chr q13.1 q24.2 123378 ChimerSeq ChiTaRs ChiTaRs LARGE-UBE2V1 LARGE chr22 33816593 UBE2V1 chr20 48697908 Exonic hg19 NA AK054989 Out-of-frame Inter-chr q13.13 123379 ChimerSeq ChiTaRs ChiTaRs BCL9L-BCL9L BCL9L chr11 118769006 BCL9L chr11 118770076 Exonic hg19 NA CA427919 Out-of-frame Intra-chr q23.3 q23.3 123380 ChimerSeq ChiTaRs ChiTaRs PCGF2-PCGF2 PCGF2 chr17 36895080 PCGF2 chr17 36895076 Exonic hg19 NA BM850179 Out-of-frame Intra-chr Tumor suppressor gene Transcription factor Tumor suppressor gene Transcription factor 123381 ChimerSeq ChiTaRs ChiTaRs SUDS3-LOC100506548 SUDS3 chr12 118849215 LOC100506548 chr5 40825726 Exonic hg19 NA BG928089 Out-of-frame Inter-chr q24.23 123382 ChimerSeq ChiTaRs ChiTaRs SNX22-FXN SNX22 chr15 64448323 FXN chr9 71679533 Exonic hg19 NA BF752849 Out-of-frame Inter-chr q22.31 q21.11 Tumor suppressor gene 123383 ChimerSeq ChiTaRs ChiTaRs NSFL1C-NSFL1C NSFL1C chr20 1424299 NSFL1C chr20 1423412 Exonic hg19 NA AV749909 Out-of-frame Intra-chr p13 p13 123384 ChimerSeq ChiTaRs ChiTaRs SENP1-MSRB3 SENP1 chr12 48499900 MSRB3 chr12 65702308 Exonic hg19 NA BU785369 5'UTR-5'UTR Intra-chr q13.11 q14.3 123385 ChimerSeq ChiTaRs ChiTaRs NUFIP2-NUFIP2 NUFIP2 chr17 27587873 NUFIP2 chr17 27589129 Exonic hg19 NA DW437789 Out-of-frame Intra-chr q11.2 q11.2 123386 ChimerSeq ChiTaRs ChiTaRs HAUS4-FBXL13 HAUS4 chr14 23424408 FBXL13 chr7 102464622 Exonic hg19 NA N20469 Out-of-frame Inter-chr q11.2 q22.1 Tumor suppressor gene 123387 ChimerSeq ChiTaRs ChiTaRs JUP-SNAPC1 JUP chr17 39766414 SNAPC1 chr14 62229212 Exonic hg19 NA BF836089 Out-of-frame Inter-chr q21.2 Tumor suppressor gene q23.2 123388 ChimerSeq ChiTaRs ChiTaRs UBTF-UBTF UBTF chr17 42293117 UBTF chr17 42290267 Exonic hg19 NA EC563459 Out-of-frame Intra-chr q21.31 q21.31 123389 ChimerSeq ChiTaRs ChiTaRs MALAT1-HBA2 MALAT1 chr11 65268220 HBA2 chr16 222888 Exonic hg19 NA H58889 Out-of-frame Inter-chr q13.1 p13.3 123390 ChimerSeq ChiTaRs ChiTaRs SLC9A3R1-SLC9A3R1 SLC9A3R1 chr17 72751705 SLC9A3R1 chr17 72754164 Exonic hg19 NA AW888429 Out-of-frame Intra-chr q25.1 Tumor suppressor gene q25.1 Tumor suppressor gene 123391 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65267672 MALAT1 chr11 65267712 Exonic hg19 NA AW976079 Out-of-frame Intra-chr q13.1 q13.1 123392 ChimerSeq ChiTaRs ChiTaRs NCAM1-NCAM1 NCAM1 chr11 113126713 NCAM1 chr11 113130891 Exonic hg19 NA W26619 Out-of-frame Intra-chr q23.2 q23.2 123393 ChimerSeq ChiTaRs ChiTaRs UBE2V1-RNF114 UBE2V1 chr20 48729699 RNF114 chr20 48558097 Exonic hg19 NA BM019459 5'UTR-CDS Intra-chr q13.13 q13.13 123394 ChimerSeq ChiTaRs ChiTaRs RAN-CD74 RAN chr12 131360638 CD74 chr5 149781438 Exonic hg19 NA BX456619 Out-of-frame Inter-chr q24.33 q33.1 123395 ChimerSeq ChiTaRs ChiTaRs ANKRD52-CALD1 ANKRD52 chr12 56652152 CALD1 chr7 134610790 Exonic hg19 NA AK098479 Out-of-frame Inter-chr q13.3 q33 123396 ChimerSeq ChiTaRs ChiTaRs RALY-RALY RALY chr20 32660056 RALY chr20 32660066 Exonic hg19 NA BI836639 Out-of-frame Intra-chr q11.22 q11.22 123397 ChimerSeq ChiTaRs ChiTaRs AKAP13-NCOA2 AKAP13 chr15 85959789 NCOA2 chr8 71246232 Exonic hg19 NA BF379189 Out-of-frame Inter-chr q25.3 q13.3 Oncogene Transcription factor 123398 ChimerSeq ChiTaRs ChiTaRs MBP-N4BP2L2 MBP chr18 74691001 N4BP2L2 chr13 33006968 Exonic hg19 NA DB312529 Out-of-frame Inter-chr q23 q13.1 123399 ChimerSeq ChiTaRs ChiTaRs COX6A1-WDR33 COX6A1 chr12 120878407 WDR33 chr2 128506361 Exonic hg19 NA BG957239 Out-of-frame Inter-chr q24.31 q14.3 123400 ChimerSeq ChiTaRs ChiTaRs XPO6-TXNDC16 XPO6 chr16 28110256 TXNDC16 chr14 52959179 Exonic hg19 NA BE162529 Out-of-frame Inter-chr p12.1 q22.1 123401 ChimerSeq ChiTaRs ChiTaRs DNAJA3-DNAJA3 DNAJA3 chr16 4506775 DNAJA3 chr16 4505590 Exonic hg19 NA AA913729 3'UTR-3'UTR Intra-chr Tumor suppressor gene Tumor suppressor gene 123402 ChimerSeq ChiTaRs ChiTaRs RASSF2-FGR RASSF2 chr20 4766974 FGR chr1 27948095 Exonic hg19 NA BE831579 Out-of-frame Inter-chr p13 Tumor suppressor gene p35.3 TK:Src 123403 ChimerSeq ChiTaRs ChiTaRs MAP4K5-MAP4K5 MAP4K5 chr14 50929469 MAP4K5 chr14 50941804 Exonic hg19 NA BF956949 Out-of-frame Intra-chr q22.1 q22.1 123404 ChimerSeq ChiTaRs ChiTaRs PML-MAPK1IP1L PML chr15 74325605 MAPK1IP1L chr14 55524739 Exonic hg19 NA AF388193 Out-of-frame Inter-chr q24.1 Oncogene Tumor suppressor gene q22.3 123405 ChimerSeq ChiTaRs ChiTaRs RALGAPA2-CNTFR RALGAPA2 chr20 20475902 CNTFR chr9 34557534 Exonic hg19 NA BI032749 Out-of-frame Inter-chr p11.23 p13.3 123406 ChimerSeq ChiTaRs ChiTaRs SF3B3-NUP88 SF3B3 chr16 70582685 NUP88 chr17 5319833 Exonic hg19 NA BE706779 Out-of-frame Inter-chr q22.1 p13.2 123407 ChimerSeq ChiTaRs ChiTaRs EVL-HKR1 EVL chr14 100575068 HKR1 chr19 37853302 Exonic hg19 NA BQ327689 Out-of-frame Inter-chr q32.2 q13.12 Transcription factor 123408 ChimerSeq ChiTaRs ChiTaRs PLCB1-PLCB1 PLCB1 chr20 8629285 PLCB1 chr20 8618801 Exonic hg19 NA CV383659 Out-of-frame Intra-chr p12.3 p12.3 123409 ChimerSeq ChiTaRs ChiTaRs RBM14-RBM4-RBM14-RBM4 RBM14-RBM4 chr11 66413736 RBM14-RBM4 chr11 66413678 Exonic hg19 NA AA188829 Out-of-frame Intra-chr q13.2 Tumor suppressor gene q13.2 Tumor suppressor gene 123410 ChimerSeq ChiTaRs ChiTaRs CNDP2-PAX8 CNDP2 chr18 72176440 PAX8 chr2 114001208 Exonic hg19 NA BI010769 Out-of-frame Inter-chr q22.3 Tumor suppressor gene q14.1 Oncogene Transcription factor 123411 ChimerSeq ChiTaRs ChiTaRs POU2F2-POU2F2 POU2F2 chr19 42592093 POU2F2 chr19 42591154 Exonic hg19 NA BF509229 Out-of-frame Intra-chr q13.2 Transcription factor q13.2 Transcription factor 123412 ChimerSeq ChiTaRs ChiTaRs RFX2-RFX2 RFX2 chr19 6024327 RFX2 chr19 6024313 Exonic hg19 NA BF365469 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Transcription factor 123413 ChimerSeq ChiTaRs ChiTaRs RNF213-SIT1 RNF213 chr17 78261757 SIT1 chr9 35649300 Exonic hg19 NA AX748309 Out-of-frame Inter-chr q25.3 Oncogene p13.3 123414 ChimerSeq ChiTaRs ChiTaRs SCAF11-ZMIZ1 SCAF11 chr12 46347699 ZMIZ1 chr10 81075850 Exonic hg19 NA BE840759 Out-of-frame Inter-chr q12 q22.3 123415 ChimerSeq ChiTaRs ChiTaRs TOB2-ACO2 TOB2 chr22 41842785 ACO2 chr22 41895730 Exonic hg19 NA BU849679 Out-of-frame Intra-chr q13.2 q13.2 Seq+ 123416 ChimerSeq ChiTaRs ChiTaRs GPATCH1-TFPI GPATCH1 chr19 33579100 TFPI chr2 188385268 Exonic hg19 NA BU664679 Out-of-frame Inter-chr q13.11 q32.1 123417 ChimerSeq ChiTaRs ChiTaRs ACTG1-ACTG1 ACTG1 chr17 79479171 ACTG1 chr17 79477219 Exonic hg19 NA CB409249 Out-of-frame Intra-chr q25.3 q25.3 123418 ChimerSeq ChiTaRs ChiTaRs CALM3-CALM3 CALM3 chr19 47112165 CALM3 chr19 47112200 Exonic hg19 NA BI028359 Out-of-frame Intra-chr q13.32 q13.32 123419 ChimerSeq ChiTaRs ChiTaRs DDX17-DSP DDX17 chr22 38879985 DSP chr6 7586498 Exonic hg19 NA BF933159 Out-of-frame Inter-chr q13.1 p24.3 Tumor suppressor gene 123420 ChimerSeq ChiTaRs ChiTaRs ZFPL1-RXRB ZFPL1 chr11 64855870 RXRB chr6 4395862 Exonic hg19 NA CB052569 Out-of-frame Inter-chr q13.1 Transcription factor 123421 ChimerSeq ChiTaRs ChiTaRs TMEM199-TMEM199 TMEM199 chr17 26695684 TMEM199 chr17 26694411 Exonic hg19 NA CB164079 Out-of-frame Intra-chr q11.2 q11.2 123422 ChimerSeq ChiTaRs ChiTaRs FUT8-IFT52 FUT8 chr14 66209298 IFT52 chr20 42232476 Exonic hg19 NA BF996799 Out-of-frame Inter-chr q23.3 q13.12 123423 ChimerSeq ChiTaRs ChiTaRs SNX1-SNX1 SNX1 chr15 64435628 SNX1 chr15 64428545 Exonic hg19 NA BE831969 Out-of-frame Intra-chr q22.31 q22.31 123424 ChimerSeq ChiTaRs ChiTaRs U2AF2-F11R U2AF2 chr19 56180356 F11R chr1 160983349 Exonic hg19 NA BF372619 Out-of-frame Inter-chr q13.42 q23.3 123425 ChimerSeq ChiTaRs ChiTaRs ZNF93-AP2A2 ZNF93 chr19 20011902 AP2A2 chr11 1003721 Exonic hg19 NA DB178459 Out-of-frame Inter-chr p12 Transcription factor p15.5 123426 ChimerSeq ChiTaRs ChiTaRs EXD2-EXD2 EXD2 chr14 69708475 EXD2 chr14 69701705 Exonic hg19 NA W24099 Out-of-frame Intra-chr q24.1 q24.1 123427 ChimerSeq ChiTaRs ChiTaRs XPO6-XPO6 XPO6 chr16 28124373 XPO6 chr16 28115866 Exonic hg19 NA BU557309 Out-of-frame Intra-chr p12.1 p12.1 123428 ChimerSeq ChiTaRs ChiTaRs CCNB1IP1-ARF3 CCNB1IP1 chr14 20797531 ARF3 chr12 49332489 Exonic hg19 NA BC020999 Out-of-frame Inter-chr q11.2 q13.12 123429 ChimerSeq ChiTaRs ChiTaRs HYOU1-HYOU1 HYOU1 chr11 118916544 HYOU1 chr11 118922195 Exonic hg19 NA BI011249 Out-of-frame Intra-chr 123430 ChimerSeq ChiTaRs ChiTaRs PSMA7-PSMA7 PSMA7 chr20 60713278 PSMA7 chr20 60713261 Exonic hg19 NA CA312659 Out-of-frame Intra-chr q13.33 q13.33 123431 ChimerSeq ChiTaRs ChiTaRs RPS3-C7orf31 RPS3 chr11 75113427 C7orf31 chr7 25219619 Exonic hg19 NA BP262829 Out-of-frame Inter-chr q13.4 p15.3 123432 ChimerSeq ChiTaRs ChiTaRs FANCA-FANCA FANCA chr16 89877785 FANCA chr16 89877617 Exonic hg19 NA BF334909 Out-of-frame Intra-chr q24.3 Oncogene q24.3 Oncogene 123433 ChimerSeq ChiTaRs ChiTaRs SGCG-CASP7 SGCG chr13 23898679 CASP7 chr10 115480767 Exonic hg19 NA BE711179 Out-of-frame Inter-chr q12.12 q25.3 123434 ChimerSeq ChiTaRs ChiTaRs CACNA1C-CABIN1 CACNA1C chr12 2646741 CABIN1 chr22 24480579 Exonic hg19 NA T20009 Out-of-frame Inter-chr p13.33 123435 ChimerSeq ChiTaRs ChiTaRs PPDPF-TMED7-TICAM2 PPDPF chr20 62153518 TMED7-TICAM2 chr5 114961461 Exonic hg19 NA AA631869 Out-of-frame Inter-chr q13.33 q22.3 123436 ChimerSeq ChiTaRs ChiTaRs GNAS-GNAS GNAS chr20 57466681 GNAS chr20 57466767 Exonic hg19 NA BQ720919 Out-of-frame Intra-chr q13.32 Oncogene q13.32 Oncogene 123437 ChimerSeq ChiTaRs ChiTaRs SLIRP-SEC14L1 SLIRP chr14 78183917 SEC14L1 chr17 75204019 Exonic hg19 NA N80149 Out-of-frame Inter-chr q24.3 q25.2 123438 ChimerSeq ChiTaRs ChiTaRs ZNF263-ZNF263 ZNF263 chr16 3341056 ZNF263 chr16 3341169 Exonic hg19 NA AA243879 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Transcription factor 123439 ChimerSeq ChiTaRs ChiTaRs LEO1-LEO1 LEO1 chr15 52258133 LEO1 chr15 52245346 Exonic hg19 NA AW996989 Out-of-frame Intra-chr q21.2 q21.2 123440 ChimerSeq ChiTaRs ChiTaRs C1QTNF1-AFF1 C1QTNF1 chr17 77045870 AFF1 chr4 87967240 Exonic hg19 NA BF064219 3'UTR-CDS Inter-chr q25.3 q21.3 Oncogene 123441 ChimerSeq ChiTaRs ChiTaRs CALM3-ANKRD26 CALM3 chr19 47111347 ANKRD26 chr10 27369421 Exonic hg19 NA BF839329 Out-of-frame Inter-chr q13.32 p12.1 123442 ChimerSeq ChiTaRs ChiTaRs TMED10-MALAT1 TMED10 chr14 75602523 MALAT1 chr11 65266862 Exonic hg19 NA AW747969 Out-of-frame Inter-chr q24.3 q13.1 123443 ChimerSeq ChiTaRs ChiTaRs CBS-SEMA4B CBS chr21 44474372 SEMA4B chr15 90752806 Exonic hg19 NA BQ332259 Out-of-frame Inter-chr q22.3 q26.1 123444 ChimerSeq ChiTaRs ChiTaRs GPC5-CDYL GPC5 chr13 93004461 CDYL chr6 4716028 Exonic hg19 NA AI827689 Out-of-frame Inter-chr q31.3 Tumor suppressor gene p25.1 123445 ChimerSeq ChiTaRs ChiTaRs TPT1-TPT1 TPT1 chr13 45913674 TPT1 chr13 45911473 Exonic hg19 NA BI006729 Out-of-frame Intra-chr q14.13 q14.13 123446 ChimerSeq ChiTaRs ChiTaRs SPTSSA-SPTSSA SPTSSA chr14 34903525 SPTSSA chr14 34903519 Exonic hg19 NA CD240239 Out-of-frame Intra-chr q13.1 q13.1 123447 ChimerSeq ChiTaRs ChiTaRs IVD-MALAT1 IVD chr15 40713505 MALAT1 chr11 65267855 Exonic hg19 NA AA618569 Out-of-frame Inter-chr q15.1 q13.1 123448 ChimerSeq ChiTaRs ChiTaRs TMEM97-TMEM97 TMEM97 chr17 26655514 TMEM97 chr17 26655692 Exonic hg19 NA BU607589 Out-of-frame Intra-chr q11.2 q11.2 123449 ChimerSeq ChiTaRs ChiTaRs CNDP2-ALKBH5 CNDP2 chr18 72187366 ALKBH5 chr17 18112395 Exonic hg19 NA AI906669 Out-of-frame Inter-chr q22.3 Tumor suppressor gene p11.2 123450 ChimerSeq ChiTaRs ChiTaRs C12orf40-VTI1B C12orf40 chr12 40065702 VTI1B chr14 68133117 Exonic hg19 NA BE709559 Out-of-frame Inter-chr q12 q24.1 123451 ChimerSeq ChiTaRs ChiTaRs BCR-CYYR1 BCR chr22 23634651 CYYR1 chr21 27878123 Exonic hg19 NA U19397 Out-of-frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q21.3 123452 ChimerSeq ChiTaRs ChiTaRs N4BP2L1-ZNF238 N4BP2L1 chr13 33002267 ZNF238 chr1 244217086 Exonic hg19 NA BE242289 Out-of-frame Inter-chr q13.1 Tumor suppressor gene 123453 ChimerSeq ChiTaRs ChiTaRs NSMCE1-LTBR NSMCE1 chr16 27268806 LTBR chr12 6500478 Exonic hg19 NA BE069149 Out-of-frame Inter-chr p12.1 p13.31 123454 ChimerSeq ChiTaRs ChiTaRs ATN1-C15orf27 ATN1 chr12 7051332 C15orf27 chr15 76398609 Exonic hg19 NA BM723529 Out-of-frame Inter-chr p13.31 123455 ChimerSeq ChiTaRs ChiTaRs RAB31-ZEB1 RAB31 chr18 9722157 ZEB1 chr10 31608180 Exonic hg19 NA U19969 Out-of-frame Inter-chr p11.22 p11.22 Transcription factor 123456 ChimerSeq ChiTaRs ChiTaRs SAMD4A-IGFBP5 SAMD4A chr14 55074751 IGFBP5 chr2 217549926 Exonic hg19 NA BM981449 Out-of-frame Inter-chr q22.2 q35 Tumor suppressor gene 123457 ChimerSeq ChiTaRs ChiTaRs DLGAP4-SPSB3 DLGAP4 chr20 35156491 SPSB3 chr16 1830236 Exonic hg19 NA AW844629 Out-of-frame Inter-chr q11.23 p13.3 123458 ChimerSeq ChiTaRs ChiTaRs DYNC1H1-CELSR3 DYNC1H1 chr14 102510993 CELSR3 chr3 48670490 Exonic hg19 NA EG327939 Out-of-frame Inter-chr q32.31 p21.31 123459 ChimerSeq ChiTaRs ChiTaRs SGCG-SGCG SGCG chr13 23808851 SGCG chr13 23853508 Exonic hg19 NA BQ307129 Out-of-frame Intra-chr q12.12 q12.12 123460 ChimerSeq ChiTaRs ChiTaRs FAM48A-FAM48A FAM48A chr13 37597838 FAM48A chr13 37597828 Exonic hg19 NA AI274639 Out-of-frame Intra-chr 123461 ChimerSeq ChiTaRs ChiTaRs CD68-RCC2 CD68 chr17 7485429 RCC2 chr1 17733375 Exonic hg19 NA AW305219 3'UTR-3'UTR Inter-chr p13.1 123462 ChimerSeq ChiTaRs ChiTaRs LDOC1L-PTPRM LDOC1L chr22 44890617 PTPRM chr18 7745344 Exonic hg19 NA BF848439 Out-of-frame Inter-chr p11.23 123463 ChimerSeq ChiTaRs ChiTaRs EIF2AK4-EIF2AK4 EIF2AK4 chr15 40241469 EIF2AK4 chr15 40246119 Exonic hg19 NA AB037759 Out-of-frame Intra-chr q15.1 q15.1 123464 ChimerSeq ChiTaRs ChiTaRs ADAMTS5-GTF3C3 ADAMTS5 chr21 28334672 GTF3C3 chr2 197660476 Exonic hg19 NA BQ380594 Out-of-frame Inter-chr q21.3 q33.1 123465 ChimerSeq ChiTaRs ChiTaRs NAA20-SCD NAA20 chr20 20014257 SCD chr10 102124111 Exonic hg19 NA CD365669 Out-of-frame Inter-chr p11.23 q24.31 123466 ChimerSeq ChiTaRs ChiTaRs RGL3-MALAT1 RGL3 chr19 11510610 MALAT1 chr11 65266540 Exonic hg19 NA BG548829 Out-of-frame Inter-chr p13.2 q13.1 123467 ChimerSeq ChiTaRs ChiTaRs MACROD1-MACROD1 MACROD1 chr11 63783583 MACROD1 chr11 63884049 Exonic hg19 NA BG956289 Out-of-frame Intra-chr q13.1 q13.1 123468 ChimerSeq ChiTaRs ChiTaRs REXO2-SARM1 REXO2 chr11 114320999 SARM1 chr17 26714401 Exonic hg19 NA AA528039 Out-of-frame Inter-chr q23.2 q11.2 123469 ChimerSeq ChiTaRs ChiTaRs WIPI1-WIPI1 WIPI1 chr17 66417674 WIPI1 chr17 66417422 Exonic hg19 NA BI868589 Out-of-frame Intra-chr q24.2 q24.2 123470 ChimerSeq ChiTaRs ChiTaRs MICALL1-MICALL1 MICALL1 chr22 38337772 MICALL1 chr22 38336725 Exonic hg19 NA BG946379 Out-of-frame Intra-chr q13.1 q13.1 123471 ChimerSeq ChiTaRs ChiTaRs TSPAN9-TSPAN9 TSPAN9 chr12 3316416 TSPAN9 chr12 3316141 Exonic hg19 NA BQ184979 Out-of-frame Intra-chr p13.33 p13.33 123472 ChimerSeq ChiTaRs ChiTaRs DOT1L-COL6A1 DOT1L chr19 2220134 COL6A1 chr21 47419998 Exonic hg19 NA BF849519 Out-of-frame Inter-chr p13.3 Oncogene Transcription factor q22.3 123473 ChimerSeq ChiTaRs ChiTaRs ASCC2-EZR ASCC2 chr22 30188500 EZR chr6 159191893 Exonic hg19 NA BE140559 Out-of-frame Inter-chr q12.2 q25.3 123474 ChimerSeq ChiTaRs ChiTaRs TERF2-NNMT TERF2 chr16 69419618 NNMT chr11 114182954 Exonic hg19 NA BF913499 Out-of-frame Inter-chr q22.1 Transcription factor q23.2 123475 ChimerSeq ChiTaRs ChiTaRs LOC146880-DIAPH1 LOC146880 chr17 62760780 DIAPH1 chr5 140954790 Exonic hg19 NA BF853299 Out-of-frame Inter-chr q31.3 123476 ChimerSeq ChiTaRs ChiTaRs BORA-DIS3 BORA chr13 73329436 DIS3 chr13 73336950 Exonic hg19 NA BE813339 Out-of-frame Intra-chr q21.33 q21.33 123477 ChimerSeq ChiTaRs ChiTaRs CST1-ALDH3B2 CST1 chr20 23728407 ALDH3B2 chr11 67429637 Exonic hg19 NA U37519 Out-of-frame Inter-chr p11.21 q13.2 123478 ChimerSeq ChiTaRs ChiTaRs HN1L-HN1L HN1L chr16 1751046 HN1L chr16 1750532 Exonic hg19 NA CN360349 Out-of-frame Intra-chr 123479 ChimerSeq ChiTaRs ChiTaRs XYLT1-CSNK1D XYLT1 chr16 17268009 CSNK1D chr17 80228749 Exonic hg19 NA BI021289 Out-of-frame Inter-chr p12.3 q25.3 123480 ChimerSeq ChiTaRs ChiTaRs SCAMP2-CSNK1D SCAMP2 chr15 75141020 CSNK1D chr17 80200543 Exonic hg19 NA BM873809 Out-of-frame Inter-chr q24.1 q25.3 123481 ChimerSeq ChiTaRs ChiTaRs MRO-SLC1A2 MRO chr18 48345978 SLC1A2 chr11 35385322 Exonic hg19 NA BF362149 Out-of-frame Inter-chr q21.2 p13 123482 ChimerSeq ChiTaRs ChiTaRs CSNK1D-WNK1 CSNK1D chr17 80218329 WNK1 chr12 994278 Exonic hg19 NA BE837509 Out-of-frame Inter-chr q25.3 p13.33 123483 ChimerSeq ChiTaRs ChiTaRs ARHGEF7-ZNF512 ARHGEF7 chr13 111928915 ZNF512 chr2 27845009 Exonic hg19 NA AW867789 Out-of-frame Inter-chr q34 p23.3 Transcription factor 123484 ChimerSeq ChiTaRs ChiTaRs VRK1-ALOX5AP VRK1 chr14 97329031 ALOX5AP chr13 31318411 Exonic hg19 NA AA077909 Out-of-frame Inter-chr q32.2 CK1:VRK q12.3 123485 ChimerSeq ChiTaRs ChiTaRs ZBTB45-ZBTB45 ZBTB45 chr19 59030192 ZBTB45 chr19 59031098 Exonic hg19 NA CN267839 Out-of-frame Intra-chr q13.43 Transcription factor q13.43 Transcription factor 123486 ChimerSeq ChiTaRs ChiTaRs GART-VCP GART chr21 34891587 VCP chr9 35070176 Exonic hg19 NA BE147859 Out-of-frame Inter-chr p13.3 123487 ChimerSeq ChiTaRs ChiTaRs CA10-UBN1 CA10 chr17 50117599 UBN1 chr16 4930336 Exonic hg19 NA AA323879 Out-of-frame Inter-chr q22 p13.3 123488 ChimerSeq ChiTaRs ChiTaRs KLK3-KLK3 KLK3 chr19 51363332 KLK3 chr19 51363335 Exonic hg19 NA AA226359 Out-of-frame Intra-chr q13.33 q13.33 123489 ChimerSeq ChiTaRs ChiTaRs UTP20-UTP20 UTP20 chr12 101779460 UTP20 chr12 101777071 Exonic hg19 NA AA720539 Out-of-frame Intra-chr q23.2 q23.2 123490 ChimerSeq ChiTaRs ChiTaRs PCBP2-CDK11B PCBP2 chr12 53848593 CDK11B chr1 1570949 Exonic hg19 NA BC033069 Out-of-frame Inter-chr q13.13 p36.33 123491 ChimerSeq ChiTaRs ChiTaRs TCF4-LIPA TCF4 chr18 52891012 LIPA chr10 90975727 Exonic hg19 NA AI265859 Out-of-frame Inter-chr q21.2 Tumor suppressor gene Transcription factor q23.31 123492 ChimerSeq ChiTaRs ChiTaRs FUT5-FUT5 FUT5 chr19 5903684 FUT5 chr19 5894688 Exonic hg19 NA BX474089 Out-of-frame Intra-chr p13.3 p13.3 123493 ChimerSeq ChiTaRs ChiTaRs KPNB1-S100A13 KPNB1 chr17 45755740 S100A13 chr1 153604197 Exonic hg19 NA BF090779 Out-of-frame Inter-chr q21.32 q21.3 123494 ChimerSeq ChiTaRs ChiTaRs GAS7-AFF1 GAS7 chr17 10100696 AFF1 chr4 87929179 Exonic hg19 NA BF371439 Out-of-frame Inter-chr p13.1 q21.3 Oncogene 123495 ChimerSeq ChiTaRs ChiTaRs LGALS3-ATG12 LGALS3 chr14 55612006 ATG12 chr5 115166929 Exonic hg19 NA AI131189 Out-of-frame Inter-chr q22.3 q22.3 123496 ChimerSeq ChiTaRs ChiTaRs HIRA-AGBL4 HIRA chr22 19429074 AGBL4 chr1 49832860 Exonic hg19 NA AI621249 Out-of-frame Inter-chr q11.21 Tumor suppressor gene p33 123497 ChimerSeq ChiTaRs ChiTaRs MRPL38-MRPL38 MRPL38 chr17 73898318 MRPL38 chr17 73896875 Exonic hg19 NA BI000889 Out-of-frame Intra-chr q25.1 q25.1 123498 ChimerSeq ChiTaRs ChiTaRs NCOA3-ZMYND8 NCOA3 chr20 46130763 ZMYND8 chr20 45920609 Exonic hg19 NA DA853259 5'UTR-CDS Intra-chr q13.12 Transcription factor q13.12 123499 ChimerSeq ChiTaRs ChiTaRs PLEKHM1P-POLN PLEKHM1P chr17 62779238 POLN chr4 2242779 Exonic hg19 NA BG979549 Out-of-frame Inter-chr p16.3 123500 ChimerSeq ChiTaRs ChiTaRs RACGAP1-RBM4 RACGAP1 chr12 50387322 RBM4 chr11 66399693 Exonic hg19 NA BF901109 Out-of-frame Inter-chr q13.12 q13.2 Tumor suppressor gene 123501 ChimerSeq ChiTaRs ChiTaRs ATP1B2-SNCB ATP1B2 chr17 7560616 SNCB chr5 176047692 Exonic hg19 NA BM702669 Out-of-frame Inter-chr p13.1 q35.2 123502 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65268086 MALAT1 chr11 65266832 Exonic hg19 NA CB069039 Out-of-frame Intra-chr q13.1 q13.1 123503 ChimerSeq ChiTaRs ChiTaRs ITPR2-ITPR2 ITPR2 chr12 26490277 ITPR2 chr12 26490256 Exonic hg19 NA AW972739 Out-of-frame Intra-chr p11.23 p11.23 123504 ChimerSeq ChiTaRs ChiTaRs RPS16-HIST1H1C RPS16 chr19 39926587 HIST1H1C chr6 26056333 Exonic hg19 NA CF128699 Out-of-frame Inter-chr q13.2 p22.2 123505 ChimerSeq ChiTaRs ChiTaRs CAMSAP3-PML CAMSAP3 chr19 7681311 PML chr15 74327364 Exonic hg19 NA BI000919 Out-of-frame Inter-chr p13.2 q24.1 Oncogene Tumor suppressor gene 123506 ChimerSeq ChiTaRs ChiTaRs PAPLN-PAPLN PAPLN chr14 73739072 PAPLN chr14 73739017 Exonic hg19 NA BU608329 Out-of-frame Intra-chr q24.2 q24.2 123507 ChimerSeq ChiTaRs ChiTaRs MIR100HG-HPGD MIR100HG chr11 122137254 HPGD chr4 175427972 Exonic hg19 NA BF988619 Out-of-frame Inter-chr q24.1 q34.1 Tumor suppressor gene 123508 ChimerSeq ChiTaRs ChiTaRs SIX1-SIX1 SIX1 chr14 61112846 SIX1 chr14 61112412 Exonic hg19 NA BU675359 Out-of-frame Intra-chr q23.1 Transcription factor q23.1 Transcription factor 123509 ChimerSeq ChiTaRs ChiTaRs MX1-FNBP1 MX1 chr21 42824592 FNBP1 chr9 132669646 Exonic hg19 NA AW390099 Out-of-frame Inter-chr q22.3 q34.11 123510 ChimerSeq ChiTaRs ChiTaRs UBA52-SPTAN1 UBA52 chr19 18685946 SPTAN1 chr9 131353865 Exonic hg19 NA BF082819 Out-of-frame Inter-chr p13.11 q34.11 123511 ChimerSeq ChiTaRs ChiTaRs RPS5-HDAC1 RPS5 chr19 58899554 HDAC1 chr1 32757757 Exonic hg19 NA U50079 Out-of-frame Inter-chr q13.43 p35.2 Tumor suppressor gene 123512 ChimerSeq ChiTaRs ChiTaRs TPCN2-TPCN2 TPCN2 chr11 68856387 TPCN2 chr11 68856692 Exonic hg19 NA BG981599 Out-of-frame Intra-chr q13.3 q13.3 123513 ChimerSeq ChiTaRs ChiTaRs PPP6R2-PPP1R13L PPP6R2 chr22 50810580 PPP1R13L chr19 45889309 Exonic hg19 NA BM849429 Out-of-frame Inter-chr q13.33 q13.32 123514 ChimerSeq ChiTaRs ChiTaRs UFD1L-MED24 UFD1L chr22 19438402 MED24 chr17 38176561 Exonic hg19 NA BE465519 Out-of-frame Inter-chr q21.1 123515 ChimerSeq ChiTaRs ChiTaRs GPI-FGF2 GPI chr19 34893318 FGF2 chr4 123814902 Exonic hg19 NA AI342169 3'UTR-3'UTR Inter-chr q28.1 123516 ChimerSeq ChiTaRs ChiTaRs PRKAR1A-PRKAR1A PRKAR1A chr17 66528897 PRKAR1A chr17 66528066 Exonic hg19 NA CN478669 Out-of-frame Intra-chr q24.2 Oncogene Tumor suppressor gene q24.2 Oncogene Tumor suppressor gene 123517 ChimerSeq ChiTaRs ChiTaRs MYBPC2-MYBPC2 MYBPC2 chr19 50961888 MYBPC2 chr19 50961630 Exonic hg19 NA AA348059 Out-of-frame Intra-chr q13.33 q13.33 123518 ChimerSeq ChiTaRs ChiTaRs PRR12-H19 PRR12 chr19 50129696 H19 chr11 2018502 Exonic hg19 NA AA693879 3'UTR-3'UTR Inter-chr q13.33 Transcription factor p15.5 Tumor suppressor gene 123519 ChimerSeq ChiTaRs ChiTaRs BOLA2-UBAP2L BOLA2 chr16 29996237 UBAP2L chr1 154223559 Exonic hg19 NA BG956089 Out-of-frame Inter-chr p11.2 q21.3 123520 ChimerSeq ChiTaRs ChiTaRs RNF213-RNF213 RNF213 chr17 78359021 RNF213 chr17 78361773 Exonic hg19 NA AK130239 Out-of-frame Intra-chr q25.3 Oncogene q25.3 Oncogene 123521 ChimerSeq ChiTaRs ChiTaRs RAB34-RAB34 RAB34 chr17 27041537 RAB34 chr17 27041302 Exonic hg19 NA BM670449 Out-of-frame Intra-chr q11.2 q11.2 123522 ChimerSeq ChiTaRs ChiTaRs NUMBL-CBX6 NUMBL chr19 41172778 CBX6 chr22 39260330 Exonic hg19 NA AI692569 Out-of-frame Inter-chr q13.2 q13.1 123523 ChimerSeq ChiTaRs ChiTaRs SUV420H1-COX4I1 SUV420H1 chr11 67925619 COX4I1 chr16 85840360 Exonic hg19 NA BU533029 Out-of-frame Inter-chr q24.1 123524 ChimerSeq ChiTaRs ChiTaRs MYL6-ARHGAP26 MYL6 chr12 56555358 ARHGAP26 chr5 142587741 Exonic hg19 NA AW086503 Out-of-frame Inter-chr q13.2 q31.3 123525 ChimerSeq ChiTaRs ChiTaRs CBX6-CBX6 CBX6 chr22 39260446 CBX6 chr22 39260478 Exonic hg19 NA CB306679 Out-of-frame Intra-chr q13.1 q13.1 123526 ChimerSeq ChiTaRs ChiTaRs APP-APP APP chr21 27284272 APP chr21 27326729 Exonic hg19 NA BF330219 Out-of-frame Intra-chr q21.3 q21.3 123527 ChimerSeq ChiTaRs ChiTaRs ANO2-ANO2 ANO2 chr12 5713917 ANO2 chr12 5714078 Exonic hg19 NA BM682729 Out-of-frame Intra-chr p13.31 p13.31 123528 ChimerSeq ChiTaRs ChiTaRs XRRA1-SPCS2 XRRA1 chr11 74660085 SPCS2 chr1 28422276 Exonic hg19 NA BI822849 Out-of-frame Inter-chr q13.4 q13.4 123529 ChimerSeq ChiTaRs ChiTaRs VAT1-GOLM1 VAT1 chr17 41167997 GOLM1 chr9 88650286 Exonic hg19 NA AI909409 Out-of-frame Inter-chr q21.31 q21.33 123530 ChimerSeq ChiTaRs ChiTaRs HBA2-ZNF268 HBA2 chr16 223705 ZNF268 chr12 133742425 Exonic hg19 NA BU741869 Out-of-frame Inter-chr p13.3 q24.33 Transcription factor 123531 ChimerSeq ChiTaRs ChiTaRs NFATC3-NFATC3 NFATC3 chr16 68225678 NFATC3 chr16 68191771 Exonic hg19 NA BE087229 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Transcription factor 123532 ChimerSeq ChiTaRs ChiTaRs CSNK1G1-CBX3 CSNK1G1 chr15 64493918 CBX3 chr7 26252221 Exonic hg19 NA BQ379079 Out-of-frame Inter-chr q22.31 p15.2 123533 ChimerSeq ChiTaRs ChiTaRs TRIM25-LPCAT1 TRIM25 chr17 54972559 LPCAT1 chr5 1476829 Exonic hg19 NA BG003119 Out-of-frame Inter-chr q22 123534 ChimerSeq ChiTaRs ChiTaRs ITGA11-ITGA11 ITGA11 chr15 68605146 ITGA11 chr15 68628102 Exonic hg19 NA CN482769 Out-of-frame Intra-chr q23 q23 123535 ChimerSeq ChiTaRs ChiTaRs ZNFX1-ZNFX1 ZNFX1 chr20 47863121 ZNFX1 chr20 47862636 Exonic hg19 NA BM687359 Out-of-frame Intra-chr q13.13 q13.13 123536 ChimerSeq ChiTaRs ChiTaRs PLEKHH3-PTBP1 PLEKHH3 chr17 40820160 PTBP1 chr19 805697 Exonic hg19 NA AI655629 Out-of-frame Inter-chr q21.2 p13.3 123537 ChimerSeq ChiTaRs ChiTaRs NEDD4L-PIP5K1A NEDD4L chr18 56065256 PIP5K1A chr1 151172777 Exonic hg19 NA BE172039 Out-of-frame Inter-chr q21.31 Tumor suppressor gene q21.3 123538 ChimerSeq ChiTaRs ChiTaRs WIPF2-DSP WIPF2 chr17 38420704 DSP chr6 7580448 Exonic hg19 NA BI042619 Out-of-frame Inter-chr q21.2 p24.3 Tumor suppressor gene 123539 ChimerSeq ChiTaRs ChiTaRs SLC39A6-SLC39A6 SLC39A6 chr18 33696740 SLC39A6 chr18 33703465 Exonic hg19 NA BE166679 Out-of-frame Intra-chr q12.2 q12.2 123540 ChimerSeq ChiTaRs ChiTaRs C14orf1-TRIP12 C14orf1 chr14 76117572 TRIP12 chr2 230670530 Exonic hg19 NA BF056039 Out-of-frame Inter-chr q24.3 q36.3 123541 ChimerSeq ChiTaRs ChiTaRs PTPRS-PDHB PTPRS chr19 5206041 PDHB chr3 58417832 Exonic hg19 NA BF930759 Out-of-frame Inter-chr p13.3 p14.3 123542 ChimerSeq ChiTaRs ChiTaRs SLCO2B1-SLCO2B1 SLCO2B1 chr11 74916478 SLCO2B1 chr11 74915940 Exonic hg19 NA AW606939 Out-of-frame Intra-chr q13.4 q13.4 123543 ChimerSeq ChiTaRs ChiTaRs BACE2-DNAJB6 BACE2 chr21 42648524 DNAJB6 chr7 157205445 Exonic hg19 NA AW025939 3'UTR-3'UTR Inter-chr q22.2 q36.3 123544 ChimerSeq ChiTaRs ChiTaRs NLRX1-NLRX1 NLRX1 chr11 119044719 NLRX1 chr11 119044351 Exonic hg19 NA BQ276409 Out-of-frame Intra-chr q23.3 q23.3 123545 ChimerSeq ChiTaRs ChiTaRs COPS2-CSMD2 COPS2 chr15 49428914 CSMD2 chr1 34595569 Exonic hg19 NA BE144019 Out-of-frame Inter-chr q21.1 Tumor suppressor gene p35.1 123546 ChimerSeq ChiTaRs ChiTaRs SNRPD1-JMJD1C SNRPD1 chr18 19208637 JMJD1C chr10 65139507 Exonic hg19 NA BF808939 Out-of-frame Inter-chr q11.2 q21.3 123547 ChimerSeq ChiTaRs ChiTaRs EML2-GOT2 EML2 chr19 46121892 GOT2 chr16 58753187 Exonic hg19 NA BF365549 Out-of-frame Inter-chr q13.32 q21 123548 ChimerSeq ChiTaRs ChiTaRs GNB5-RGS1 GNB5 chr15 52420431 RGS1 chr1 192544937 Exonic hg19 NA S59049 Out-of-frame Inter-chr q21.2 q31.2 123549 ChimerSeq ChiTaRs ChiTaRs SPECC1-SPECC1 SPECC1 chr17 20107803 SPECC1 chr17 20109167 Exonic hg19 NA BF908879 Out-of-frame Intra-chr p11.2 p11.2 123550 ChimerSeq ChiTaRs ChiTaRs ITPA-ITPA ITPA chr20 3204259 ITPA chr20 3190175 Exonic hg19 NA BM545059 Out-of-frame Intra-chr p13 p13 123551 ChimerSeq ChiTaRs ChiTaRs JPH3-ACTB JPH3 chr16 87715835 ACTB chr7 5567174 Exonic hg19 NA BF376499 Out-of-frame Inter-chr q24.2 p22.1 123552 ChimerSeq ChiTaRs ChiTaRs TP53I13-TP53I13 TP53I13 chr17 27900175 TP53I13 chr17 27899059 Exonic hg19 NA CA422259 3'UTR-CDS Intra-chr q11.2 q11.2 123553 ChimerSeq ChiTaRs ChiTaRs ANKRD11-HUWE1 ANKRD11 chr16 89349935 HUWE1 chrX 53692399 Exonic hg19 NA BF930699 Out-of-frame Inter-chr q24.3 p11.22 123554 ChimerSeq ChiTaRs ChiTaRs TP53INP2-ERGIC1 TP53INP2 chr20 33298392 ERGIC1 chr5 172359497 Exonic hg19 NA BC023529 Out-of-frame Inter-chr q11.22 q35.1 123555 ChimerSeq ChiTaRs ChiTaRs RPA1-RPA1 RPA1 chr17 1798355 RPA1 chr17 1800607 Exonic hg19 NA BE816249 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p13.3 Tumor suppressor gene 123556 ChimerSeq ChiTaRs ChiTaRs NAA40-NAA40 NAA40 chr11 63724128 NAA40 chr11 63722201 Exonic hg19 NA CN481769 Out-of-frame Intra-chr q13.1 q13.1 123557 ChimerSeq ChiTaRs ChiTaRs IRGQ-SWI5 IRGQ chr19 44090527 SWI5 chr9 131051030 Exonic hg19 NA AA041439 Out-of-frame Inter-chr q13.31 q34.11 123558 ChimerSeq ChiTaRs ChiTaRs NTRK3-ACTR8 NTRK3 chr15 88420081 ACTR8 chr3 53904138 Exonic hg19 NA AI651749 Out-of-frame Inter-chr q25.3 Oncogene Tumor suppressor gene p21.1 123559 ChimerSeq ChiTaRs ChiTaRs MYH7B-PPFIBP1 MYH7B chr20 33590345 PPFIBP1 chr12 27746377 Exonic hg19 NA AA449769 Out-of-frame Inter-chr q11.22 p11.23 123560 ChimerSeq ChiTaRs ChiTaRs SNAP23-BAZ2A SNAP23 chr15 42824751 BAZ2A chr12 57003085 Exonic hg19 NA AW978559 Out-of-frame Inter-chr q15.1 q13.3 Transcription factor 123561 ChimerSeq ChiTaRs ChiTaRs PRDM10-COL12A1 PRDM10 chr11 129784637 COL12A1 chr6 75825550 Exonic hg19 NA BF843989 Out-of-frame Inter-chr q24.3 Transcription factor q14.1 123562 ChimerSeq ChiTaRs ChiTaRs HSP90B1-APP HSP90B1 chr12 104341704 APP chr21 27253164 Exonic hg19 NA BU607969 Out-of-frame Inter-chr q23.3 Tumor suppressor gene q21.3 123563 ChimerSeq ChiTaRs ChiTaRs CHD4-CHD4 CHD4 chr12 6679508 CHD4 chr12 6688027 Exonic hg19 NA BU430929 Out-of-frame Intra-chr p13.31 p13.31 123564 ChimerSeq ChiTaRs ChiTaRs AP1M2-AP1M2 AP1M2 chr19 10697981 AP1M2 chr19 10692175 Exonic hg19 NA CB162929 Out-of-frame Intra-chr p13.2 p13.2 123565 ChimerSeq ChiTaRs ChiTaRs DNAJC4-PPP2R3B DNAJC4 chr11 64001749 PPP2R3B chrY 257122 Exonic hg19 NA H40939 Out-of-frame Inter-chr q13.1 p22.33 123566 ChimerSeq ChiTaRs ChiTaRs DLEU2-RNF121 DLEU2 chr13 50694171 RNF121 chr11 71698009 Exonic hg19 NA DA646959 Out-of-frame Inter-chr q14.2 Tumor suppressor gene q13.4 123567 ChimerSeq ChiTaRs ChiTaRs NPIPB7-NRBP2 NPIPB7 chr16 28854237 NRBP2 chr8 144917117 Exonic hg19 NA AA514249 Out-of-frame Inter-chr p12.1 q24.3 Other:NRBP 123568 ChimerSeq ChiTaRs ChiTaRs MIR100HG-DSC3 MIR100HG chr11 122033430 DSC3 chr18 28571246 Exonic hg19 NA AU120329 Out-of-frame Inter-chr q24.1 q12.1 Tumor suppressor gene 123569 ChimerSeq ChiTaRs ChiTaRs MALAT1-OXR1 MALAT1 chr11 65270891 OXR1 chr8 107670085 Exonic hg19 NA DB218349 Out-of-frame Inter-chr q13.1 q23.1 123570 ChimerSeq ChiTaRs ChiTaRs HNRNPL-RASSF5 HNRNPL chr19 39327420 RASSF5 chr1 206762489 Exonic hg19 NA BG284239 CDS-3'UTR Inter-chr q32.1 Tumor suppressor gene 123571 ChimerSeq ChiTaRs ChiTaRs ARHGAP5-ARHGAP5 ARHGAP5 chr14 32571555 ARHGAP5 chr14 32569612 Exonic hg19 NA AF150179 Out-of-frame Intra-chr q12 q12 123572 ChimerSeq ChiTaRs ChiTaRs CTSF-CTSF CTSF chr11 66331457 CTSF chr11 66334914 Exonic hg19 NA W23209 Out-of-frame Intra-chr q13.2 q13.2 123573 ChimerSeq ChiTaRs ChiTaRs CHSY1-SRCAP CHSY1 chr15 101742305 SRCAP chr16 30748539 Exonic hg19 NA BI035919 Out-of-frame Inter-chr q26.3 p11.2 Transcription factor 123574 ChimerSeq ChiTaRs ChiTaRs BCAT1-MDGA2 BCAT1 chr12 24966386 MDGA2 chr14 47647579 Exonic hg19 NA AL120469 Out-of-frame Inter-chr p12.1 q21.3 123575 ChimerSeq ChiTaRs ChiTaRs SPAG5-AS1-SPAG5-AS1 SPAG5-AS1 chr17 26943135 SPAG5-AS1 chr17 26941843 Exonic hg19 NA BG252029 Out-of-frame Intra-chr q11.2 q11.2 Tumor suppressor gene 123576 ChimerSeq ChiTaRs ChiTaRs RTL1-ZNF664 RTL1 chr14 101348063 ZNF664 chr12 124498844 Exonic hg19 NA BF697079 Out-of-frame Inter-chr q32.2 q24.31 Transcription factor 123577 ChimerSeq ChiTaRs ChiTaRs PATZ1-LRP8 PATZ1 chr22 31737529 LRP8 chr1 53709208 Exonic hg19 NA BQ333149 Out-of-frame Inter-chr q12.2 Transcription factor p32.3 123578 ChimerSeq ChiTaRs ChiTaRs PITPNC1-ZMIZ1 PITPNC1 chr17 65424057 ZMIZ1 chr10 80856962 Exonic hg19 NA CV361339 Out-of-frame Inter-chr q24.2 q22.3 123579 ChimerSeq ChiTaRs ChiTaRs PRPF8-MCAT PRPF8 chr17 1565000 MCAT chr22 43529406 Exonic hg19 NA BG998719 Out-of-frame Inter-chr q13.2 123580 ChimerSeq ChiTaRs ChiTaRs BCR-MTHFS BCR chr22 23524241 MTHFS chr15 80181535 Exonic hg19 NA BF947729 Out-of-frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q25.1 123581 ChimerSeq ChiTaRs ChiTaRs MAPK1-MAPK1 MAPK1 chr22 22160169 MAPK1 chr22 22118345 Exonic hg19 NA M84489 Out-of-frame Intra-chr q11.22 Oncogene q11.22 Oncogene 123582 ChimerSeq ChiTaRs ChiTaRs TMEM135-TMEM135 TMEM135 chr11 86859962 TMEM135 chr11 86859701 Exonic hg19 NA BF327439 Out-of-frame Intra-chr q14.2 q14.2 123583 ChimerSeq ChiTaRs ChiTaRs TCIRG1-CNIH TCIRG1 chr11 67815201 CNIH chr14 54893654 Exonic hg19 NA AF031379 Out-of-frame Inter-chr q13.2 123584 ChimerSeq ChiTaRs ChiTaRs GREB1L-PLD3 GREB1L chr18 19019598 PLD3 chr19 40880478 Exonic hg19 NA BE938399 Out-of-frame Inter-chr q11.1 q13.2 123585 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65267219 MALAT1 chr11 65269720 Exonic hg19 NA AA777969 Out-of-frame Intra-chr q13.1 q13.1 123586 ChimerSeq ChiTaRs ChiTaRs IGF2BP1-IGF2BP1 IGF2BP1 chr17 47132894 IGF2BP1 chr17 47132793 Exonic hg19 NA CN430059 Out-of-frame Intra-chr q21.32 q21.32 123587 ChimerSeq ChiTaRs ChiTaRs ZNF551-ZNF551 ZNF551 chr19 58201179 ZNF551 chr19 58199827 Exonic hg19 NA CF135679 Out-of-frame Intra-chr q13.43 Transcription factor q13.43 Transcription factor 123588 ChimerSeq ChiTaRs ChiTaRs PIGT-PIGT PIGT chr20 44047539 PIGT chr20 44048005 Exonic hg19 NA BE074269 Out-of-frame Intra-chr q13.12 q13.12 123589 ChimerSeq ChiTaRs ChiTaRs TCF25-TCF25 TCF25 chr16 89973265 TCF25 chr16 89973638 Exonic hg19 NA BF882939 Out-of-frame Intra-chr q24.3 q24.3 123590 ChimerSeq ChiTaRs ChiTaRs NUPL1-NUPL1 NUPL1 chr13 25876851 NUPL1 chr13 25876802 Exonic hg19 NA D44719 Out-of-frame Intra-chr 123591 ChimerSeq ChiTaRs ChiTaRs PDXDC1-PDXDC1 PDXDC1 chr16 15141350 PDXDC1 chr16 15132003 Exonic hg19 NA BE161549 Out-of-frame Intra-chr p13.11 p13.11 123592 ChimerSeq ChiTaRs ChiTaRs CPT1A-FGG CPT1A chr11 68523409 FGG chr4 155525288 Exonic hg19 NA CB154699 Out-of-frame Inter-chr q13.3 q32.1 123593 ChimerSeq ChiTaRs ChiTaRs TMEM147-AKAP11 TMEM147 chr19 36038428 AKAP11 chr13 42876240 Exonic hg19 NA BG655839 Out-of-frame Inter-chr q13.12 q14.11 123594 ChimerSeq ChiTaRs ChiTaRs CUEDC1-CUEDC1 CUEDC1 chr17 55944484 CUEDC1 chr17 55943646 Exonic hg19 NA BF948209 Out-of-frame Intra-chr q22 q22 123595 ChimerSeq ChiTaRs ChiTaRs RABEP1-RABEP1 RABEP1 chr17 5253874 RABEP1 chr17 5253869 Exonic hg19 NA Z28809 Out-of-frame Intra-chr p13.2 p13.2 123596 ChimerSeq ChiTaRs ChiTaRs RPL38-NCAPH2 RPL38 chr17 72206019 NCAPH2 chr22 50962352 Exonic hg19 NA BM810069 3'UTR-3'UTR Inter-chr q25.1 q13.33 123597 ChimerSeq ChiTaRs ChiTaRs CHD4-EI24 CHD4 chr12 6690838 EI24 chr11 125448920 Exonic hg19 NA BF770169 Out-of-frame Inter-chr p13.31 q24.2 Tumor suppressor gene 123598 ChimerSeq ChiTaRs ChiTaRs DNAAF1-STK10 DNAAF1 chr16 84189315 STK10 chr5 171579329 Exonic hg19 NA BF848279 Out-of-frame Inter-chr q24.1 q35.1 Tumor suppressor gene 123599 ChimerSeq ChiTaRs ChiTaRs APLP2-APLP2 APLP2 chr11 129996708 APLP2 chr11 129992202 Exonic hg19 NA BE843869 Out-of-frame Intra-chr q24.3 q24.3 123600 ChimerSeq ChiTaRs ChiTaRs NEK9-NEK9 NEK9 chr14 75563878 NEK9 chr14 75555265 Exonic hg19 NA AW068399 Out-of-frame Intra-chr q24.3 Other:NEK q24.3 Other:NEK 123601 ChimerSeq ChiTaRs ChiTaRs FAM155A-NQO1 FAM155A chr13 108363730 NQO1 chr16 69743316 Exonic hg19 NA BQ220009 Out-of-frame Inter-chr q33.3 q22.1 123602 ChimerSeq ChiTaRs ChiTaRs IPO5-IPO5 IPO5 chr13 98673351 IPO5 chr13 98669075 Exonic hg19 NA AW606649 Out-of-frame Intra-chr q32.2 q32.2 123603 ChimerSeq ChiTaRs ChiTaRs KIF7-YWHAZ KIF7 chr15 90175540 YWHAZ chr8 101935311 Exonic hg19 NA BF329619 Out-of-frame Inter-chr q26.1 Tumor suppressor gene q22.3 123604 ChimerSeq ChiTaRs ChiTaRs GDF15-ARID4B GDF15 chr19 18499891 ARID4B chr1 235409777 Exonic hg19 NA BI054889 Out-of-frame Inter-chr p13.11 q42.3 123605 ChimerSeq ChiTaRs ChiTaRs SEC14L5-MBP SEC14L5 chr16 5061957 MBP chr18 74702748 Exonic hg19 NA BF933809 Out-of-frame Inter-chr p13.3 q23 123606 ChimerSeq ChiTaRs ChiTaRs OAS1-OAS1 OAS1 chr12 113344889 OAS1 chr12 113344864 Exonic hg19 NA BQ921779 Out-of-frame Intra-chr q24.13 q24.13 123607 ChimerSeq ChiTaRs ChiTaRs TAGLN-TAGLN TAGLN chr11 117075307 TAGLN chr11 117074160 Exonic hg19 NA AA655019 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene 123608 ChimerSeq ChiTaRs ChiTaRs LOC100507424-FASN LOC100507424 chr12 2966916 FASN chr17 80040912 Exonic hg19 NA AI970549 Out-of-frame Inter-chr q25.3 123609 ChimerSeq ChiTaRs ChiTaRs YWHAB-YWHAB YWHAB chr20 43536499 YWHAB chr20 43536501 Exonic hg19 NA BF898629 Out-of-frame Intra-chr q13.12 q13.12 123610 ChimerSeq ChiTaRs ChiTaRs RARA-RARA RARA chr17 38518318 RARA chr17 38517397 Exonic hg19 NA R47409 Out-of-frame Intra-chr q21.2 Oncogene Transcription factor q21.2 Oncogene Transcription factor 123611 ChimerSeq ChiTaRs ChiTaRs RUNDC1-NDUFB9 RUNDC1 chr17 41144026 NDUFB9 chr8 125555358 Exonic hg19 NA AI174779 Out-of-frame Inter-chr q21.31 q24.13 123612 ChimerSeq ChiTaRs ChiTaRs NEAT1-NEAT1 NEAT1 chr11 65193811 NEAT1 chr11 65193778 Exonic hg19 NA BF337529 Out-of-frame Intra-chr q13.1 q13.1 123613 ChimerSeq ChiTaRs ChiTaRs FOXN3-AUP1 FOXN3 chr14 89744376 AUP1 chr2 74754636 Exonic hg19 NA BI025029 Out-of-frame Inter-chr q32.11 Transcription factor p13.1 123614 ChimerSeq ChiTaRs ChiTaRs COL1A1-ABI3BP COL1A1 chr17 48262813 ABI3BP chr3 100551970 Exonic hg19 NA AI685149 Out-of-frame Inter-chr q21.33 Oncogene q12.2 123615 ChimerSeq ChiTaRs ChiTaRs ERN2-PLK1 ERN2 chr16 23705535 PLK1 chr16 23701677 Exonic hg19 NA AW362679 Out-of-frame Intra-chr p12.2 p12.2 Other:PLK Tumor suppressor gene 123616 ChimerSeq ChiTaRs ChiTaRs RB1-C14orf166 RB1 chr13 48986640 C14orf166 chr14 52466457 Exonic hg19 NA BE844049 Out-of-frame Inter-chr q14.2 Oncogene Tumor suppressor gene q22.1 123617 ChimerSeq ChiTaRs ChiTaRs PER1-NPDC1 PER1 chr17 8059617 NPDC1 chr9 139935701 Exonic hg19 NA BI908289 Out-of-frame Inter-chr p13.1 Oncogene q34.3 123618 ChimerSeq ChiTaRs ChiTaRs NDRG3-LMTK2 NDRG3 chr20 35280371 LMTK2 chr7 97810213 Exonic hg19 NA DB299319 Out-of-frame Inter-chr q11.23 q21.3 123619 ChimerSeq ChiTaRs ChiTaRs ESF1-RNASE1 ESF1 chr20 13713106 RNASE1 chr14 21269619 Exonic hg19 NA D26129 Out-of-frame Inter-chr p12.1 q11.2 123620 ChimerSeq ChiTaRs ChiTaRs SRRM2-SRRM2 SRRM2 chr16 2808532 SRRM2 chr16 2815180 Exonic hg19 NA AI655799 Out-of-frame Intra-chr p13.3 p13.3 123621 ChimerSeq ChiTaRs ChiTaRs ZNF814-USF1 ZNF814 chr19 58379731 USF1 chr1 161009971 Exonic hg19 NA BF932409 Out-of-frame Inter-chr q13.43 Transcription factor q23.3 Transcription factor 123622 ChimerSeq ChiTaRs ChiTaRs INO80-INO80 INO80 chr15 41271229 INO80 chr15 41271325 Exonic hg19 NA BU690049 Out-of-frame Intra-chr q15.1 q15.1 123623 ChimerSeq ChiTaRs ChiTaRs ACTG1-TADA2B ACTG1 chr17 79479086 TADA2B chr4 7057993 Exonic hg19 NA BI040029 Out-of-frame Inter-chr q25.3 p16.1 123624 ChimerSeq ChiTaRs ChiTaRs GNS-NCAM2 GNS chr12 65107664 NCAM2 chr21 22558984 Exonic hg19 NA CA449339 Out-of-frame Inter-chr q14.3 q21.1 Tumor suppressor gene 123625 ChimerSeq ChiTaRs ChiTaRs DSG3-TNRC6B DSG3 chr18 29049117 TNRC6B chr22 40730106 Exonic hg19 NA AW993609 Out-of-frame Inter-chr q12.1 q13.1 123626 ChimerSeq ChiTaRs ChiTaRs USP10-USP10 USP10 chr16 84779098 USP10 chr16 84779008 Exonic hg19 NA BE091809 Out-of-frame Intra-chr q24.1 q24.1 123627 ChimerSeq ChiTaRs ChiTaRs HS3ST4-ATP5G2 HS3ST4 chr16 25704461 ATP5G2 chr12 54065074 Exonic hg19 NA CX755679 Out-of-frame Inter-chr p12.1 q13.13 123628 ChimerSeq ChiTaRs ChiTaRs TNFAIP2-KDM2B TNFAIP2 chr14 103603776 KDM2B chr12 121933440 Exonic hg19 NA AW594509 3'UTR-CDS Inter-chr q32.32 q24.31 Transcription factor 123629 ChimerSeq ChiTaRs ChiTaRs NRGN-HRH3 NRGN chr11 124616515 HRH3 chr20 60790017 Exonic hg19 NA AB045369 Out-of-frame Inter-chr q24.2 q13.33 123630 ChimerSeq ChiTaRs ChiTaRs HSD11B2-HSD11B2 HSD11B2 chr16 67470983 HSD11B2 chr16 67470713 Exonic hg19 NA BM783869 Out-of-frame Intra-chr q22.1 q22.1 123631 ChimerSeq ChiTaRs ChiTaRs TPT1-DUT TPT1 chr13 45915211 DUT chr15 48634286 Exonic hg19 NA BM090749 Out-of-frame Inter-chr q14.13 q21.1 123632 ChimerSeq ChiTaRs ChiTaRs SAMD4A-SAMD4A SAMD4A chr14 55258850 SAMD4A chr14 55258824 Exonic hg19 NA BC011489 Out-of-frame Intra-chr q22.2 q22.2 123633 ChimerSeq ChiTaRs ChiTaRs DUT-DUT DUT chr15 48634334 DUT chr15 48628256 Exonic hg19 NA CB853769 Out-of-frame Intra-chr q21.1 q21.1 123634 ChimerSeq ChiTaRs ChiTaRs GSTP1-SLC26A4 GSTP1 chr11 67354124 SLC26A4 chr7 107322541 Exonic hg19 NA BU527119 3'UTR-CDS Inter-chr q13.2 Tumor suppressor gene q22.3 123635 ChimerSeq ChiTaRs ChiTaRs SIK3-TRIOBP SIK3 chr11 116926167 TRIOBP chr22 38120720 Exonic hg19 NA AB051449 Out-of-frame Inter-chr q23.3 q13.1 123636 ChimerSeq ChiTaRs ChiTaRs MRPL38-MRPL38 MRPL38 chr17 73895690 MRPL38 chr17 73896048 Exonic hg19 NA BG984019 Out-of-frame Intra-chr q25.1 q25.1 123637 ChimerSeq ChiTaRs ChiTaRs C16orf52-DMD C16orf52 chr16 22073163 DMD chrX 32614077 Exonic hg19 NA AW800789 Out-of-frame Inter-chr p21.1 Tumor suppressor gene 123638 ChimerSeq ChiTaRs ChiTaRs SPATS2-SLTM SPATS2 chr12 49778423 SLTM chr15 59204158 Exonic hg19 NA BG994059 Out-of-frame Inter-chr q13.12 q22.1 123639 ChimerSeq ChiTaRs ChiTaRs SYNE2-SP110 SYNE2 chr14 64692228 SP110 chr2 231037638 Exonic hg19 NA DW009759 Out-of-frame Inter-chr q23.2 q37.1 Transcription factor 123640 ChimerSeq ChiTaRs ChiTaRs APLP2-ZNF652 APLP2 chr11 129939847 ZNF652 chr17 47366929 Exonic hg19 NA AI985209 Out-of-frame Inter-chr q24.3 q21.33 Transcription factor 123641 ChimerSeq ChiTaRs ChiTaRs ANGPTL4-RPL28 ANGPTL4 chr19 8439255 RPL28 chr19 55897312 Exonic hg19 NA BU543829 Out-of-frame Intra-chr p13.2 Tumor suppressor gene q13.42 123642 ChimerSeq ChiTaRs ChiTaRs ARHGEF1-CELF2 ARHGEF1 chr19 42389292 CELF2 chr10 11369113 Exonic hg19 NA BF359809 Out-of-frame Inter-chr q13.2 p14 123643 ChimerSeq ChiTaRs ChiTaRs PLEKHA5-PLEKHA5 PLEKHA5 chr12 19529100 PLEKHA5 chr12 19514602 Exonic hg19 NA BU677399 Out-of-frame Intra-chr p12.3 p12.3 123644 ChimerSeq ChiTaRs ChiTaRs DISP2-TMED10 DISP2 chr15 40663520 TMED10 chr14 75598172 Exonic hg19 NA AK026919 Out-of-frame Inter-chr q15.1 q24.3 123645 ChimerSeq ChiTaRs ChiTaRs KRT6A-KRT6A KRT6A chr12 52882134 KRT6A chr12 52881437 Exonic hg19 NA BE182989 Out-of-frame Intra-chr q13.13 q13.13 123646 ChimerSeq ChiTaRs ChiTaRs UBE2M-HSF1 UBE2M chr19 59067411 HSF1 chr8 145535388 Exonic hg19 NA AA480819 Out-of-frame Inter-chr q13.43 q24.3 Transcription factor 123647 ChimerSeq ChiTaRs ChiTaRs CDH5-EML1 CDH5 chr16 66437635 EML1 chr14 100295543 Exonic hg19 NA BG005249 Out-of-frame Inter-chr q21 Oncogene Tumor suppressor gene q32.2 123648 ChimerSeq ChiTaRs ChiTaRs FOXN3-CD74 FOXN3 chr14 90066669 CD74 chr5 149781692 Exonic hg19 NA BG272929 Out-of-frame Inter-chr q32.11 Transcription factor q33.1 123649 ChimerSeq ChiTaRs ChiTaRs XBP1-JUP XBP1 chr22 29196495 JUP chr17 39780331 Exonic hg19 NA BM807369 Out-of-frame Inter-chr q12.1 Transcription factor q21.2 Tumor suppressor gene 123650 ChimerSeq ChiTaRs ChiTaRs PTPRM-TET3 PTPRM chr18 7706931 TET3 chr2 74334655 Exonic hg19 NA BF331499 Out-of-frame Inter-chr p11.23 p13.1 Transcription factor 123651 ChimerSeq ChiTaRs ChiTaRs TXNRD2-RHBDD1 TXNRD2 chr22 19882248 RHBDD1 chr2 227718675 Exonic hg19 NA AI559179 Out-of-frame Inter-chr q11.21 q36.3 123652 ChimerSeq ChiTaRs ChiTaRs PSME1-IQCE PSME1 chr14 24608168 IQCE chr7 2647130 Exonic hg19 NA BM990679 Out-of-frame Inter-chr q12 p22.3 123653 ChimerSeq ChiTaRs ChiTaRs CMAS-CMAS CMAS chr12 22223561 CMAS chr12 22218055 Exonic hg19 NA BX106129 Out-of-frame Intra-chr p12.1 p12.1 123654 ChimerSeq ChiTaRs ChiTaRs CD68-SH3BGRL CD68 chr17 7483365 SH3BGRL chrX 80553880 Exonic hg19 NA BP305239 Out-of-frame Inter-chr p13.1 q21.1 123655 ChimerSeq ChiTaRs ChiTaRs HS3ST4-FEN1 HS3ST4 chr16 26043662 FEN1 chr11 61563094 Exonic hg19 NA BC019599 Out-of-frame Inter-chr p12.1 q12.2 123656 ChimerSeq ChiTaRs ChiTaRs MLL-MLL MLL chr11 118355590 MLL chr11 118352599 Exonic hg19 NA AF272379 Out-of-frame Intra-chr q23.3 q23.3 123657 ChimerSeq ChiTaRs ChiTaRs PAFAH1B1-TAP1 PAFAH1B1 chr17 2587794 TAP1 chr6 4247569 Exonic hg19 NA BE504849 Out-of-frame Inter-chr p13.3 Tumor suppressor gene p21.32 Tumor suppressor gene 123658 ChimerSeq ChiTaRs ChiTaRs PATZ1-WDR25 PATZ1 chr22 31736936 WDR25 chr14 100995439 Exonic hg19 NA BF594249 Out-of-frame Inter-chr q12.2 Transcription factor q32.2 123659 ChimerSeq ChiTaRs ChiTaRs TIMP2-AUTS2 TIMP2 chr17 76850274 AUTS2 chr7 69760290 Exonic hg19 NA BE938099 Out-of-frame Inter-chr q25.3 q11.22 123660 ChimerSeq ChiTaRs ChiTaRs SPPL2B-ELL2 SPPL2B chr19 2339590 ELL2 chr5 95220802 Exonic hg19 NA BX538289 Out-of-frame Inter-chr p13.3 q15 123661 ChimerSeq ChiTaRs ChiTaRs TMEM119-GAK TMEM119 chr12 108985352 GAK chr4 905553 Exonic hg19 NA BI015039 Out-of-frame Inter-chr q23.3 p16.3 Other:NAK 123662 ChimerSeq ChiTaRs ChiTaRs SPG7-FANCA SPG7 chr16 89601959 FANCA chr16 89835203 Exonic hg19 NA BF744199 Out-of-frame Intra-chr q24.3 q24.3 Oncogene 123663 ChimerSeq ChiTaRs ChiTaRs KCTD21-KCTD21 KCTD21 chr11 77882659 KCTD21 chr11 77882316 Exonic hg19 NA N28979 Out-of-frame Intra-chr q14.1 q14.1 123664 ChimerSeq ChiTaRs ChiTaRs LLPH-ATG7 LLPH chr12 66528914 ATG7 chr3 11529073 Exonic hg19 NA BM550429 Out-of-frame Inter-chr q14.3 p25.3 123665 ChimerSeq ChiTaRs ChiTaRs MED13L-GTPBP4 MED13L chr12 116403951 GTPBP4 chr10 1056410 Exonic hg19 NA BG988299 Out-of-frame Inter-chr q24.21 p15.3 Tumor suppressor gene 123666 ChimerSeq ChiTaRs ChiTaRs LRP1-ZNF3 LRP1 chr12 57588697 ZNF3 chr7 99670078 Exonic hg19 NA BF760669 Out-of-frame Inter-chr q13.3 q22.1 Transcription factor 123667 ChimerSeq ChiTaRs ChiTaRs TGM2-TGM2 TGM2 chr20 36757463 TGM2 chr20 36767813 Exonic hg19 NA AA345479 3'UTR-CDS Intra-chr q11.23 q11.23 123668 ChimerSeq ChiTaRs ChiTaRs FOXN3-FOXN3 FOXN3 chr14 90048160 FOXN3 chr14 90047857 Exonic hg19 NA BF367909 Out-of-frame Intra-chr q32.11 Transcription factor q32.11 Transcription factor 123669 ChimerSeq ChiTaRs ChiTaRs NADSYN1-HNRNPUL1 NADSYN1 chr11 71212072 HNRNPUL1 chr19 41812739 Exonic hg19 NA BF924509 Out-of-frame Inter-chr q13.4 q13.2 123670 ChimerSeq ChiTaRs ChiTaRs ZFC3H1-USP3 ZFC3H1 chr12 72015755 USP3 chr15 63814624 Exonic hg19 NA BF335959 Out-of-frame Inter-chr q21.1 q22.31 123671 ChimerSeq ChiTaRs ChiTaRs BCL2L1-SLC1A1 BCL2L1 chr20 30285346 SLC1A1 chr9 4491767 Exonic hg19 NA AU121859 Out-of-frame Inter-chr q11.21 Oncogene p24.2 123672 ChimerSeq ChiTaRs ChiTaRs TMC5-TMC5 TMC5 chr16 19476003 TMC5 chr16 19485614 Exonic hg19 NA AW856759 Out-of-frame Intra-chr p12.3 p12.3 123673 ChimerSeq ChiTaRs ChiTaRs GGT7-SPEG GGT7 chr20 33437811 SPEG chr2 220344398 Exonic hg19 NA BE501149 Out-of-frame Inter-chr q11.22 q35 CAMK:Trio 123674 ChimerSeq ChiTaRs ChiTaRs POLR3K-BLOC1S1 POLR3K chr16 97129 BLOC1S1 chr12 56110265 Exonic hg19 NA BF027549 Out-of-frame Inter-chr p13.3 q13.2 123675 ChimerSeq ChiTaRs ChiTaRs SLC38A2-SLC38A2 SLC38A2 chr12 46753539 SLC38A2 chr12 46753562 Exonic hg19 NA AW993759 Out-of-frame Intra-chr q13.11 q13.11 123676 ChimerSeq ChiTaRs ChiTaRs CD163-CD163 CD163 chr12 7654059 CD163 chr12 7653849 Exonic hg19 NA BI007059 Out-of-frame Intra-chr p13.31 p13.31 123677 ChimerSeq ChiTaRs ChiTaRs RBM39-RBM39 RBM39 chr20 34330181 RBM39 chr20 34329883 Exonic hg19 NA DB103179 Out-of-frame Intra-chr q11.22 q11.22 123678 ChimerSeq ChiTaRs ChiTaRs ZNF606-ZNF606 ZNF606 chr19 58509031 ZNF606 chr19 58509052 Exonic hg19 NA AV708299 Out-of-frame Intra-chr q13.43 Transcription factor q13.43 Transcription factor 123679 ChimerSeq ChiTaRs ChiTaRs POLG2-AARS POLG2 chr17 62477646 AARS chr16 70286297 Exonic hg19 NA AW206459 Out-of-frame Inter-chr q23.3 q22.1 123680 ChimerSeq ChiTaRs ChiTaRs ATXN2-ATXN2 ATXN2 chr12 111981647 ATXN2 chr12 111980775 Exonic hg19 NA BF084059 Out-of-frame Intra-chr q24.12 q24.12 123681 ChimerSeq ChiTaRs ChiTaRs TNRC6C-RIN3 TNRC6C chr17 76090045 RIN3 chr14 93097368 Exonic hg19 NA BI021859 Out-of-frame Inter-chr q25.3 q32.12 123682 ChimerSeq ChiTaRs ChiTaRs TMEM92-TMEM92 TMEM92 chr17 48355023 TMEM92 chr17 48351967 Exonic hg19 NA AK026449 Out-of-frame Intra-chr q21.33 q21.33 123683 ChimerSeq ChiTaRs ChiTaRs RUNX1-RUNX1 RUNX1 chr21 36368264 RUNX1 chr21 36321358 Exonic hg19 NA AW847539 Out-of-frame Intra-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q22.12 Oncogene Tumor suppressor gene Transcription factor 123684 ChimerSeq ChiTaRs ChiTaRs FBRS-KLK3 FBRS chr16 30674023 KLK3 chr19 51360463 Exonic hg19 NA BI046989 Out-of-frame Inter-chr p11.2 q13.33 123685 ChimerSeq ChiTaRs ChiTaRs PRNP-PRNP PRNP chr20 4682234 PRNP chr20 4681551 Exonic hg19 NA BU689989 3'UTR-3'UTR Intra-chr p13 p13 123686 ChimerSeq ChiTaRs ChiTaRs RBM25-UNC5B RBM25 chr14 73569141 UNC5B chr10 73059185 Exonic hg19 NA BF514639 Out-of-frame Inter-chr q24.2 q22.1 Tumor suppressor gene 123687 ChimerSeq ChiTaRs ChiTaRs AARS-LHFP AARS chr16 70298990 LHFP chr13 40110808 Exonic hg19 NA BF929009 Out-of-frame Inter-chr q22.1 q14.11 123688 ChimerSeq ChiTaRs ChiTaRs BCAS3-BCAS3 BCAS3 chr17 59293377 BCAS3 chr17 59299554 Exonic hg19 NA DN920239 Out-of-frame Intra-chr q23.2 q23.2 123689 ChimerSeq ChiTaRs ChiTaRs KHSRP-KHSRP KHSRP chr19 6414007 KHSRP chr19 6413834 Exonic hg19 NA BU619509 Out-of-frame Intra-chr p13.3 p13.3 123690 ChimerSeq ChiTaRs ChiTaRs MAU2-MAU2 MAU2 chr19 19469559 MAU2 chr19 19468917 Exonic hg19 NA BU617329 Out-of-frame Intra-chr p13.11 p13.11 123691 ChimerSeq ChiTaRs ChiTaRs PPFIA1-PPFIA1 PPFIA1 chr11 70221198 PPFIA1 chr11 70172449 Exonic hg19 NA BQ307279 Out-of-frame Intra-chr q13.3 q13.3 123692 ChimerSeq ChiTaRs ChiTaRs EMG1-EMG1 EMG1 chr12 7084916 EMG1 chr12 7084604 Exonic hg19 NA BG945499 Out-of-frame Intra-chr p13.31 p13.31 123693 ChimerSeq ChiTaRs ChiTaRs CASC4-CASC4 CASC4 chr15 44630503 CASC4 chr15 44581283 Exonic hg19 NA BQ229829 Out-of-frame Intra-chr q15.3 q15.3 123694 ChimerSeq ChiTaRs ChiTaRs SLC5A10-FGG SLC5A10 chr17 18872216 FGG chr4 155533248 Exonic hg19 NA AV657679 Out-of-frame Inter-chr p11.2 q32.1 123695 ChimerSeq ChiTaRs ChiTaRs RNF112-TNRC6A RNF112 chr17 19320114 TNRC6A chr16 24790369 Exonic hg19 NA BF920959 Out-of-frame Inter-chr p11.2 p12.1 123696 ChimerSeq ChiTaRs ChiTaRs NDE1-MLL2 NDE1 chr16 15797293 MLL2 chr19 36220738 Exonic hg19 NA BF846439 Out-of-frame Inter-chr p13.11 123697 ChimerSeq ChiTaRs ChiTaRs BOLA2-BOLA2 BOLA2 chr16 29818411 BOLA2 chr16 29821524 Exonic hg19 NA AI651289 Out-of-frame Intra-chr p11.2 p11.2 123698 ChimerSeq ChiTaRs ChiTaRs NRL-NRL NRL chr14 24553833 NRL chr14 24553361 Exonic hg19 NA W22249 Out-of-frame Intra-chr q12 Transcription factor q12 Transcription factor 123699 ChimerSeq ChiTaRs ChiTaRs PLXNB2-MERTK PLXNB2 chr22 50723882 MERTK chr2 112782686 Exonic hg19 NA AA984189 Out-of-frame Inter-chr q13.33 q13 123700 ChimerSeq ChiTaRs ChiTaRs TUBA1B-RNU5F-1 TUBA1B chr12 49521648 RNU5F-1 chr1 220160714 Exonic hg19 NA AI880459 Out-of-frame Inter-chr q13.12 p34.1 123701 ChimerSeq ChiTaRs ChiTaRs NFKBIA-NFKBIA NFKBIA chr14 35870827 NFKBIA chr14 35870928 Exonic hg19 NA CB241819 Out-of-frame Intra-chr q13.2 q13.2 123702 ChimerSeq ChiTaRs ChiTaRs TSPAN8-TSPAN8 TSPAN8 chr12 71526503 TSPAN8 chr12 71531936 Exonic hg19 NA AW363859 Out-of-frame Intra-chr q21.1 q21.1 123703 ChimerSeq ChiTaRs ChiTaRs EEF2-ABHD6 EEF2 chr19 3976484 ABHD6 chr3 58223591 Exonic hg19 NA T05979 Out-of-frame Inter-chr p13.3 p14.3 123704 ChimerSeq ChiTaRs ChiTaRs PDS5B-CIDEC PDS5B chr13 33346591 CIDEC chr3 9986421 Exonic hg19 NA BF924179 Out-of-frame Inter-chr q13.1 Tumor suppressor gene p25.3 123705 ChimerSeq ChiTaRs ChiTaRs TRABD-TRABD TRABD chr22 50638009 TRABD chr22 50637861 Exonic hg19 NA BU566029 Out-of-frame Intra-chr q13.33 q13.33 123706 ChimerSeq ChiTaRs ChiTaRs CYB5B-CYB5B CYB5B chr16 69496415 CYB5B chr16 69496448 Exonic hg19 NA BE083129 Out-of-frame Intra-chr q22.1 q22.1 123707 ChimerSeq ChiTaRs ChiTaRs GSTP1-LAMA5 GSTP1 chr11 67354124 LAMA5 chr20 60900569 Exonic hg19 NA AW206069 3'UTR-CDS Inter-chr q13.2 Tumor suppressor gene q13.33 123708 ChimerSeq ChiTaRs ChiTaRs OSBP2-CIB1 OSBP2 chr22 31140125 CIB1 chr15 90775550 Exonic hg19 NA BI015769 Out-of-frame Inter-chr q12.2 q26.1 123709 ChimerSeq ChiTaRs ChiTaRs CTSA-ATP6V0A4 CTSA chr20 44527103 ATP6V0A4 chr7 138406708 Exonic hg19 NA BF823719 Out-of-frame Inter-chr q13.12 q34 123710 ChimerSeq ChiTaRs ChiTaRs DNM1L-GPHN DNM1L chr12 32896951 GPHN chr14 67625457 Exonic hg19 NA BE172739 Out-of-frame Inter-chr p11.21 q23.3 123711 ChimerSeq ChiTaRs ChiTaRs RPS3-CLDN4 RPS3 chr11 75112774 CLDN4 chr7 73245834 Exonic hg19 NA BM844689 Out-of-frame Inter-chr q13.4 q11.23 123712 ChimerSeq ChiTaRs ChiTaRs FAM65A-EGFR FAM65A chr16 67576485 EGFR chr7 55268878 Exonic hg19 NA BF844939 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene 123713 ChimerSeq ChiTaRs ChiTaRs ETHE1-DIAPH2 ETHE1 chr19 44031294 DIAPH2 chrX 96606923 Exonic hg19 NA CV379509 Out-of-frame Inter-chr q13.31 q21.33 123714 ChimerSeq ChiTaRs ChiTaRs GABARAP-GABARAP GABARAP chr17 7143955 GABARAP chr17 7143747 Exonic hg19 NA AA455489 Out-of-frame Intra-chr p13.1 Tumor suppressor gene p13.1 Tumor suppressor gene 123715 ChimerSeq ChiTaRs ChiTaRs USP16-HOXA10-HOXA9 USP16 chr21 30419589 HOXA10-HOXA9 chr7 27205603 Exonic hg19 NA BG980419 Out-of-frame Inter-chr q21.3 Transcription factor 123716 ChimerSeq ChiTaRs ChiTaRs ACTN4-DLGAP1 ACTN4 chr19 39142874 DLGAP1 chr18 3590659 Exonic hg19 NA BF813639 Out-of-frame Inter-chr p11.31 123717 ChimerSeq ChiTaRs ChiTaRs OAZ1-OAZ1 OAZ1 chr19 2271913 OAZ1 chr19 2273028 Exonic hg19 NA BG315209 Out-of-frame Intra-chr p13.3 p13.3 123718 ChimerSeq ChiTaRs ChiTaRs C15orf39-TEAD4 C15orf39 chr15 75504508 TEAD4 chr12 3149778 Exonic hg19 NA AI952989 Out-of-frame Inter-chr q24.2 p13.33 Transcription factor 123719 ChimerSeq ChiTaRs ChiTaRs KLF12-KLF12 KLF12 chr13 74261776 KLF12 chr13 74261311 Exonic hg19 NA AI342559 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Transcription factor 123720 ChimerSeq ChiTaRs ChiTaRs TAF1D-TAF1D TAF1D chr11 93472454 TAF1D chr11 93470381 Exonic hg19 NA AI282819 Out-of-frame Intra-chr q21 q21 123721 ChimerSeq ChiTaRs ChiTaRs WSB1-GATM WSB1 chr17 25630602 GATM chr15 45657895 Exonic hg19 NA AW861199 Out-of-frame Inter-chr q11.1 q21.1 123722 ChimerSeq ChiTaRs ChiTaRs PTRF-CDC42EP5 PTRF chr17 40575261 CDC42EP5 chr19 54976258 Exonic hg19 NA AI832159 Out-of-frame Inter-chr 123723 ChimerSeq ChiTaRs ChiTaRs DOT1L-COL6A1 DOT1L chr19 2220134 COL6A1 chr21 47419956 Exonic hg19 NA BF850059 Out-of-frame Inter-chr p13.3 Oncogene Transcription factor q22.3 123724 ChimerSeq ChiTaRs ChiTaRs CDH1-CDH1 CDH1 chr16 68868724 CDH1 chr16 68868806 Exonic hg19 NA BF771649 Out-of-frame Intra-chr q22.1 Oncogene Tumor suppressor gene q22.1 Oncogene Tumor suppressor gene 123725 ChimerSeq ChiTaRs ChiTaRs TMBIM6-TMBIM6 TMBIM6 chr12 50157302 TMBIM6 chr12 50157021 Exonic hg19 NA W28869 Out-of-frame Intra-chr q13.12 q13.12 123726 ChimerSeq ChiTaRs ChiTaRs NRXN3-FMNL1 NRXN3 chr14 80287317 FMNL1 chr17 43320835 Exonic hg19 NA AA961679 Out-of-frame Inter-chr q24.3 q21.31 123727 ChimerSeq ChiTaRs ChiTaRs STRN3-DVL3 STRN3 chr14 31458100 DVL3 chr3 183875513 Exonic hg19 NA BF369139 Out-of-frame Inter-chr q12 q27.1 123728 ChimerSeq ChiTaRs ChiTaRs NDRG3-ZXDC NDRG3 chr20 35280577 ZXDC chr3 126171895 Exonic hg19 NA AA845639 Out-of-frame Inter-chr q11.23 q21.3 Transcription factor 123729 ChimerSeq ChiTaRs ChiTaRs ARHGEF18-ABL1 ARHGEF18 chr19 7471574 ABL1 chr9 133720958 Exonic hg19 NA CV376479 Out-of-frame Inter-chr p13.2 q34.12 TK:Abl Oncogene 123730 ChimerSeq ChiTaRs ChiTaRs PTPN6-CIDEC PTPN6 chr12 7064648 CIDEC chr3 10035912 Exonic hg19 NA BE935009 CDS-5'UTR Inter-chr p13.31 Tumor suppressor gene p25.3 123731 ChimerSeq ChiTaRs ChiTaRs CLMP-FARP1 CLMP chr11 122950517 FARP1 chr13 98816254 Exonic hg19 NA H59769 Out-of-frame Inter-chr q24.1 q32.2 123732 ChimerSeq ChiTaRs ChiTaRs CPSF2-SLMAP CPSF2 chr14 92628007 SLMAP chr3 57830843 Exonic hg19 NA AW802849 Out-of-frame Inter-chr q32.12 p14.3 123733 ChimerSeq ChiTaRs ChiTaRs PTRF-UBE2L3 PTRF chr17 40556174 UBE2L3 chr22 21976547 Exonic hg19 NA BE811869 Out-of-frame Inter-chr q11.21 123734 ChimerSeq ChiTaRs ChiTaRs JUNB-CAPZB JUNB chr19 12904127 CAPZB chr1 19665694 Exonic hg19 NA BI712549 Out-of-frame Inter-chr p13.13 Transcription factor p36.13 123735 ChimerSeq ChiTaRs ChiTaRs ZNRF3-ZNRF3 ZNRF3 chr22 29283204 ZNRF3 chr22 29283929 Exonic hg19 NA BE148489 Out-of-frame Intra-chr q12.1 q12.1 123736 ChimerSeq ChiTaRs ChiTaRs BBS2-SLMAP BBS2 chr16 56532481 SLMAP chr3 57910492 Exonic hg19 NA BF885209 Out-of-frame Inter-chr q13 p14.3 123737 ChimerSeq ChiTaRs ChiTaRs IGF1R-MALAT1 IGF1R chr15 99369279 MALAT1 chr11 65268278 Exonic hg19 NA BE173369 Out-of-frame Inter-chr q26.3 TK:InsR Oncogene q13.1 123738 ChimerSeq ChiTaRs ChiTaRs GRAP2-MLXIP GRAP2 chr22 40325526 MLXIP chr12 122627715 Exonic hg19 NA AW934839 Out-of-frame Inter-chr q13.1 Transcription factor 123739 ChimerSeq ChiTaRs ChiTaRs MGRN1-PXN MGRN1 chr16 4740733 PXN chr12 120654005 Exonic hg19 NA BF762439 Out-of-frame Inter-chr p13.3 q24.23 123740 ChimerSeq ChiTaRs ChiTaRs NCOA3-CD36 NCOA3 chr20 46133012 CD36 chr7 80125707 Exonic hg19 NA F12469 Out-of-frame Inter-chr q13.12 Transcription factor q21.11 123741 ChimerSeq ChiTaRs ChiTaRs NR2F2-NR2F2 NR2F2 chr15 96875159 NR2F2 chr15 96875180 Exonic hg19 NA CK725089 Out-of-frame Intra-chr q26.2 Transcription factor q26.2 Transcription factor 123742 ChimerSeq ChiTaRs ChiTaRs CMTR2-SH3PXD2A CMTR2 chr16 71319526 SH3PXD2A chr10 105589254 Exonic hg19 NA AW952669 Out-of-frame Inter-chr q24.33 123743 ChimerSeq ChiTaRs ChiTaRs AATF-MPO AATF chr17 35310376 MPO chr17 56347897 Exonic hg19 NA BF896319 Out-of-frame Intra-chr q22 123744 ChimerSeq ChiTaRs ChiTaRs SPATA13-PFKFB4 SPATA13 chr13 24808266 PFKFB4 chr3 48583324 Exonic hg19 NA CV325109 Out-of-frame Inter-chr q12.12 p21.31 123745 ChimerSeq ChiTaRs ChiTaRs NHLRC3-PHIP NHLRC3 chr13 39622753 PHIP chr6 79697963 Exonic hg19 NA BF946219 Out-of-frame Inter-chr q13.3 q14.1 123746 ChimerSeq ChiTaRs ChiTaRs CDKN1B-CDKN1B CDKN1B chr12 12874121 CDKN1B chr12 12870339 Exonic hg19 NA DB000469 Out-of-frame Intra-chr p13.1 Tumor suppressor gene p13.1 Tumor suppressor gene 123747 ChimerSeq ChiTaRs ChiTaRs SLIRP-RAP2C SLIRP chr14 78183937 RAP2C chrX 131343035 Exonic hg19 NA DB310659 Out-of-frame Inter-chr q24.3 q26.2 123748 ChimerSeq ChiTaRs ChiTaRs BCAT1-DNAJC18 BCAT1 chr12 24964353 DNAJC18 chr5 138746937 Exonic hg19 NA AI275099 Out-of-frame Inter-chr p12.1 q31.2 123749 ChimerSeq ChiTaRs ChiTaRs TMTC1-CANX TMTC1 chr12 29727270 CANX chr5 179136873 Exonic hg19 NA BE836489 Out-of-frame Inter-chr p11.22 123750 ChimerSeq ChiTaRs ChiTaRs GAB2-GAB2 GAB2 chr11 77926706 GAB2 chr11 77926914 Exonic hg19 NA BE085589 Out-of-frame Intra-chr q14.1 q14.1 123751 ChimerSeq ChiTaRs ChiTaRs TRIP4-ADORA3 TRIP4 chr15 64713987 ADORA3 chr1 112031298 Exonic hg19 NA AV705429 Out-of-frame Inter-chr q22.31 p13.2 123752 ChimerSeq ChiTaRs ChiTaRs C1QTNF6-C1QTNF6 C1QTNF6 chr22 37582115 C1QTNF6 chr22 37576211 Exonic hg19 NA AK226149 Out-of-frame Intra-chr q12.3 q12.3 123753 ChimerSeq ChiTaRs ChiTaRs MED13L-NAP1L3 MED13L chr12 116400538 NAP1L3 chrX 92928489 Exonic hg19 NA DA392149 Out-of-frame Inter-chr q24.21 q21.32 123754 ChimerSeq ChiTaRs ChiTaRs NCAM2-PID1 NCAM2 chr21 22831854 PID1 chr2 230060052 Exonic hg19 NA BQ428239 Out-of-frame Inter-chr q21.1 Tumor suppressor gene q36.3 123755 ChimerSeq ChiTaRs ChiTaRs TMPO-TMPO TMPO chr12 98927322 TMPO chr12 98926876 Exonic hg19 NA AA095709 Out-of-frame Intra-chr q23.1 q23.1 123756 ChimerSeq ChiTaRs ChiTaRs PLA2G1B-TIPIN PLA2G1B chr12 120763976 TIPIN chr15 66641655 Exonic hg19 NA BM926419 Out-of-frame Inter-chr q24.31 q22.31 123757 ChimerSeq ChiTaRs ChiTaRs DHPS-DHPS DHPS chr19 12791114 DHPS chr19 12792579 Exonic hg19 NA CV364179 Out-of-frame Intra-chr p13.13 p13.13 123758 ChimerSeq ChiTaRs ChiTaRs XPNPEP3-USO1 XPNPEP3 chr22 41258776 USO1 chr4 76678651 Exonic hg19 NA AI635379 Out-of-frame Inter-chr q13.2 q21.1 123759 ChimerSeq ChiTaRs ChiTaRs NFATC2-DTX3L NFATC2 chr20 50154054 DTX3L chr3 122288489 Exonic hg19 NA BF850139 Out-of-frame Inter-chr q13.2 Tumor suppressor gene Transcription factor q21.1 123760 ChimerSeq ChiTaRs ChiTaRs MGST1-SRGAP2 MGST1 chr12 16517343 SRGAP2 chr1 206634771 Exonic hg19 NA DB298359 Out-of-frame Inter-chr p12.3 q32.1 Tumor suppressor gene 123761 ChimerSeq ChiTaRs ChiTaRs GIPC3-GIPC3 GIPC3 chr19 3593296 GIPC3 chr19 3593005 Exonic hg19 NA BQ637589 Out-of-frame Intra-chr p13.3 p13.3 123762 ChimerSeq ChiTaRs ChiTaRs MYH9-FAM160A2 MYH9 chr22 36697662 FAM160A2 chr11 6238698 Exonic hg19 NA BQ335679 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene p15.4 123763 ChimerSeq ChiTaRs ChiTaRs HOXC4-HOXC9 HOXC4 chr12 54437223 HOXC9 chr12 54394824 Exonic hg19 NA BE076489 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 Transcription factor 123764 ChimerSeq ChiTaRs ChiTaRs ZNF160-ZNF160 ZNF160 chr19 53579695 ZNF160 chr19 53570346 Exonic hg19 NA BF086259 Out-of-frame Intra-chr q13.42 Transcription factor q13.42 Transcription factor 123765 ChimerSeq ChiTaRs ChiTaRs C11orf73-PICALM C11orf73 chr11 86017524 PICALM chr11 85742513 Exonic hg19 NA DB226349 In-Frame Intra-chr q14.2 123766 ChimerSeq ChiTaRs ChiTaRs MYO5A-TNFSF10 MYO5A chr15 52623387 TNFSF10 chr3 172226996 Exonic hg19 NA AW384939 Out-of-frame Inter-chr q21.2 q26.31 123767 ChimerSeq ChiTaRs ChiTaRs TCF3-ZNF384 TCF3 chr19 1621905 ZNF384 chr12 6793683 Exonic hg19 NA EU159436 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p13.31 Oncogene Transcription factor KB Pub 123768 ChimerSeq ChiTaRs ChiTaRs PAAF1-PAAF1 PAAF1 chr11 73590059 PAAF1 chr11 73590074 Exonic hg19 NA W26399 Out-of-frame Intra-chr q13.4 q13.4 123769 ChimerSeq ChiTaRs ChiTaRs NAA25-FMR1 NAA25 chr12 112488881 FMR1 chrX 147030915 Exonic hg19 NA AW801819 Out-of-frame Inter-chr q24.13 q27.3 123770 ChimerSeq ChiTaRs ChiTaRs CMTR2-CMTR2 CMTR2 chr16 71319588 CMTR2 chr16 71319154 Exonic hg19 NA AI751269 Out-of-frame Intra-chr 123771 ChimerSeq ChiTaRs ChiTaRs PRKCSH-MEF2A PRKCSH chr19 11556289 MEF2A chr15 100250918 Exonic hg19 NA BF742989 Out-of-frame Inter-chr p13.2 q26.3 Transcription factor 123772 ChimerSeq ChiTaRs ChiTaRs IL10RB-AFF1 IL10RB chr21 34668974 AFF1 chr4 88044323 Exonic hg19 NA AW364499 Out-of-frame Inter-chr q22.11 q21.3 Oncogene 123773 ChimerSeq ChiTaRs ChiTaRs ZNF646-PSMD6 ZNF646 chr16 31089010 PSMD6 chr3 64005019 Exonic hg19 NA CD626169 Out-of-frame Inter-chr p11.2 Transcription factor p14.1 123774 ChimerSeq ChiTaRs ChiTaRs DYRK1A-ACOXL DYRK1A chr21 38782650 ACOXL chr2 111812719 Exonic hg19 NA BF333889 Out-of-frame Inter-chr q22.13 CMGC:DYRK q13 123775 ChimerSeq ChiTaRs ChiTaRs SLC38A2-CDC42BPA SLC38A2 chr12 46752665 CDC42BPA chr1 227495664 Exonic hg19 NA AW900209 Out-of-frame Inter-chr q13.11 q42.13 123776 ChimerSeq ChiTaRs ChiTaRs SCARF2-AKAP9 SCARF2 chr22 20779797 AKAP9 chr7 91722582 Exonic hg19 NA T07089 Out-of-frame Inter-chr q11.21 q21.2 Oncogene 123777 ChimerSeq ChiTaRs ChiTaRs RFFL-RFFL RFFL chr17 33359752 RFFL chr17 33359691 Exonic hg19 NA BF804789 Out-of-frame Intra-chr q12 q12 123778 ChimerSeq ChiTaRs ChiTaRs DDX6-DDX6 DDX6 chr11 118622362 DDX6 chr11 118618929 Exonic hg19 NA BE934709 Out-of-frame Intra-chr q23.3 q23.3 123779 ChimerSeq ChiTaRs ChiTaRs FMNL3-RNF44 FMNL3 chr12 50101302 RNF44 chr5 175953713 Exonic hg19 NA AL834489 Out-of-frame Inter-chr q13.12 q35.2 123780 ChimerSeq ChiTaRs ChiTaRs PAPLN-CDC42 PAPLN chr14 73733591 CDC42 chr1 22395071 Exonic hg19 NA BE840889 Out-of-frame Inter-chr q24.2 p36.12 123781 ChimerSeq ChiTaRs ChiTaRs EFNB2-EFNB2 EFNB2 chr13 107144881 EFNB2 chr13 107145320 Exonic hg19 NA W22529 Out-of-frame Intra-chr q33.3 q33.3 123782 ChimerSeq ChiTaRs ChiTaRs B4GALNT3-TMTC1 B4GALNT3 chr12 584933 TMTC1 chr12 29805128 Exonic hg19 NA BE070329 Out-of-frame Intra-chr p13.33 p11.22 123783 ChimerSeq ChiTaRs ChiTaRs RUNX1-NLGN4Y RUNX1 chr21 36203842 NLGN4Y chrY 16915633 Exonic hg19 NA BF359339 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q11.221 123784 ChimerSeq ChiTaRs ChiTaRs GLOD4-GLOD4 GLOD4 chr17 663091 GLOD4 chr17 662580 Exonic hg19 NA BU186599 Out-of-frame Intra-chr p13.3 p13.3 123785 ChimerSeq ChiTaRs ChiTaRs IER3IP1-PAX7 IER3IP1 chr18 44682288 PAX7 chr1 18985491 Exonic hg19 NA BG957249 Out-of-frame Inter-chr q21.1 p36.13 Oncogene Transcription factor 123786 ChimerSeq ChiTaRs ChiTaRs ANO8-ANO8 ANO8 chr19 17435505 ANO8 chr19 17435155 Exonic hg19 NA BF852719 Out-of-frame Intra-chr p13.11 p13.11 123787 ChimerSeq ChiTaRs ChiTaRs CREBL2-CREBL2 CREBL2 chr12 12795417 CREBL2 chr12 12795473 Exonic hg19 NA BU161059 Out-of-frame Intra-chr p13.1 Transcription factor p13.1 Transcription factor 123788 ChimerSeq ChiTaRs ChiTaRs NOL11-ZNF510 NOL11 chr17 65740054 ZNF510 chr9 99519177 Exonic hg19 NA BQ421599 Out-of-frame Inter-chr q24.2 q22.33 Transcription factor 123789 ChimerSeq ChiTaRs ChiTaRs CYP11A1-CYP11A1 CYP11A1 chr15 74631658 CYP11A1 chr15 74636259 Exonic hg19 NA BE767819 Out-of-frame Intra-chr q24.1 q24.1 123790 ChimerSeq ChiTaRs ChiTaRs SMOC1-GALNT2 SMOC1 chr14 70352299 GALNT2 chr1 230415455 Exonic hg19 NA AF130059 Out-of-frame Inter-chr q24.2 q42.13 123791 ChimerSeq ChiTaRs ChiTaRs CASC5-ADAMTS9-AS2 CASC5 chr15 40942555 ADAMTS9-AS2 chr3 64739630 Exonic hg19 NA BQ375909 Out-of-frame Inter-chr q15.1 Oncogene p14.1 Tumor suppressor gene 123792 ChimerSeq ChiTaRs ChiTaRs CIT-MSN CIT chr12 120135265 MSN chrX 64960674 Exonic hg19 NA BF750909 Out-of-frame Inter-chr q24.23 q12 123793 ChimerSeq ChiTaRs ChiTaRs ATP6V0A1-HLCS ATP6V0A1 chr17 40618495 HLCS chr21 38206516 Exonic hg19 NA BF362589 Out-of-frame Inter-chr q21.2 q22.13 123794 ChimerSeq ChiTaRs ChiTaRs ATP8B4-MCM3 ATP8B4 chr15 50166969 MCM3 chr6 52149437 Exonic hg19 NA DA340269 Out-of-frame Inter-chr q21.2 p12.2 123795 ChimerSeq ChiTaRs ChiTaRs TMC7-PARK7 TMC7 chr16 19060249 PARK7 chr1 8021771 Exonic hg19 NA DA079029 Out-of-frame Inter-chr p12.3 p36.23 Tumor suppressor gene 123796 ChimerSeq ChiTaRs ChiTaRs GOLGA3-ARHGAP10 GOLGA3 chr12 133402833 ARHGAP10 chr4 148779303 Exonic hg19 NA AW129589 Out-of-frame Inter-chr q24.33 q31.23 123797 ChimerSeq ChiTaRs ChiTaRs PCID2-TRPS1 PCID2 chr13 113837626 TRPS1 chr8 116477741 Exonic hg19 NA BF750129 Out-of-frame Inter-chr q34 q23.3 Transcription factor 123798 ChimerSeq ChiTaRs ChiTaRs PAFAH1B3-KIAA0947 PAFAH1B3 chr19 42801347 KIAA0947 chr5 5462330 Exonic hg19 NA DB304809 Out-of-frame Inter-chr q13.2 123799 ChimerSeq ChiTaRs ChiTaRs TMED10-IL6 TMED10 chr14 75598821 IL6 chr7 22769222 Exonic hg19 NA BE619899 Out-of-frame Inter-chr q24.3 p15.3 Oncogene 123800 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65267830 MALAT1 chr11 65266597 Exonic hg19 NA DW451889 Out-of-frame Intra-chr q13.1 q13.1 123801 ChimerSeq ChiTaRs ChiTaRs TMEM230-TCP1 TMEM230 chr20 5080572 TCP1 chr6 160209138 Exonic hg19 NA BE466819 Out-of-frame Inter-chr p12.3 q25.3 123802 ChimerSeq ChiTaRs ChiTaRs ANKS1B-ASB3 ANKS1B chr12 99598534 ASB3 chr2 53897118 Exonic hg19 NA AK021579 Out-of-frame Inter-chr q23.1 p16.2 123803 ChimerSeq ChiTaRs ChiTaRs ANKDD1A-TNKS1BP1 ANKDD1A chr15 65218859 TNKS1BP1 chr11 57067297 Exonic hg19 NA BF838059 Out-of-frame Inter-chr q22.31 q12.1 123804 ChimerSeq ChiTaRs ChiTaRs LCP1-LCP1 LCP1 chr13 46730910 LCP1 chr13 46732275 Exonic hg19 NA DA670949 Out-of-frame Intra-chr q14.13 q14.13 123805 ChimerSeq ChiTaRs ChiTaRs VSIG2-VSIG2 VSIG2 chr11 124618326 VSIG2 chr11 124617370 Exonic hg19 NA BG981989 Out-of-frame Intra-chr q24.2 q24.2 123806 ChimerSeq ChiTaRs ChiTaRs RARG-TACC2 RARG chr12 53607397 TACC2 chr10 124009072 Exonic hg19 NA T29399 Out-of-frame Inter-chr q13.13 Transcription factor q26.13 123807 ChimerSeq ChiTaRs ChiTaRs HSPBP1-HSPBP1 HSPBP1 chr19 55773996 HSPBP1 chr19 55785930 Exonic hg19 NA BG954019 Out-of-frame Intra-chr q13.42 q13.42 123808 ChimerSeq ChiTaRs ChiTaRs L2HGDH-KIAA1191 L2HGDH chr14 50712601 KIAA1191 chr5 175774557 Exonic hg19 NA AW300486 Out-of-frame Inter-chr q21.3 q35.2 123809 ChimerSeq ChiTaRs ChiTaRs LINC00483-MAGI1 LINC00483 chr17 48836433 MAGI1 chr3 65764445 Exonic hg19 NA AW753106 Out-of-frame Inter-chr q21.33 Oncogene 123810 ChimerSeq ChiTaRs ChiTaRs ICAM1-RTN4 ICAM1 chr19 10381644 RTN4 chr2 55199934 Exonic hg19 NA BG537856 Out-of-frame Inter-chr p13.2 p16.1 Tumor suppressor gene 123811 ChimerSeq ChiTaRs ChiTaRs USP14-CHGA USP14 chr18 199233 CHGA chr14 93401385 Exonic hg19 NA BP386096 Out-of-frame Inter-chr p11.32 q32.12 123812 ChimerSeq ChiTaRs ChiTaRs SPATA20-SPATA20 SPATA20 chr17 48633213 SPATA20 chr17 48632616 Exonic hg19 NA AI609346 3'UTR-CDS Intra-chr q21.33 q21.33 123813 ChimerSeq ChiTaRs ChiTaRs SETD6-SETD6 SETD6 chr16 58554085 SETD6 chr16 58553855 Exonic hg19 NA BG287566 Out-of-frame Intra-chr q21 q21 123814 ChimerSeq ChiTaRs ChiTaRs RRP7A-ZNF395 RRP7A chr22 42915808 ZNF395 chr8 28222865 Exonic hg19 NA DA372666 Out-of-frame Inter-chr q13.2 p21.1 Transcription factor 123815 ChimerSeq ChiTaRs ChiTaRs PSMB3-PSMB3 PSMB3 chr17 36920476 PSMB3 chr17 36909461 Exonic hg19 NA BG115276 Out-of-frame Intra-chr 123816 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65272246 MALAT1 chr11 65272222 Exonic hg19 NA BE766616 Out-of-frame Intra-chr q13.1 q13.1 123817 ChimerSeq ChiTaRs ChiTaRs WWOX-ZFHX3 WWOX chr16 78613965 ZFHX3 chr16 72952461 Exonic hg19 NA AA555206 Out-of-frame Intra-chr q23.1 Tumor suppressor gene q22.3 Tumor suppressor gene Transcription factor 123818 ChimerSeq ChiTaRs ChiTaRs IGFLR1-CABLES1 IGFLR1 chr19 36233617 CABLES1 chr18 20785994 Exonic hg19 NA BF847726 Out-of-frame Inter-chr q13.12 q11.2 Tumor suppressor gene 123819 ChimerSeq ChiTaRs ChiTaRs SERPINA1-RPL23 SERPINA1 chr14 94844909 RPL23 chr17 37006350 Exonic hg19 NA CB134886 Out-of-frame Inter-chr q32.13 q12 123820 ChimerSeq ChiTaRs ChiTaRs YLPM1-YLPM1 YLPM1 chr14 75301993 YLPM1 chr14 75302048 Exonic hg19 NA AA420866 Out-of-frame Intra-chr q24.3 q24.3 123821 ChimerSeq ChiTaRs ChiTaRs NUDT7-SAFB NUDT7 chr16 77769824 SAFB chr19 5666924 Exonic hg19 NA DY655726 Out-of-frame Inter-chr q23.1 p13.3 Tumor suppressor gene Transcription factor 123822 ChimerSeq ChiTaRs ChiTaRs SMARCA4-PPDPF SMARCA4 chr19 11172946 PPDPF chr20 62152190 Exonic hg19 NA BF222816 Out-of-frame Inter-chr p13.2 Oncogene Tumor suppressor gene q13.33 123823 ChimerSeq ChiTaRs ChiTaRs PACS2-APLP2 PACS2 chr14 105841260 APLP2 chr11 129990599 Exonic hg19 NA DA405826 Out-of-frame Inter-chr q32.33 q24.3 123824 ChimerSeq ChiTaRs ChiTaRs MIPOL1-EIF4G2 MIPOL1 chr14 37676809 EIF4G2 chr11 10819388 Exonic hg19 NA BQ940036 Out-of-frame Inter-chr q13.3 p15.4 123825 ChimerSeq ChiTaRs ChiTaRs DYRK1A-CLK3 DYRK1A chr21 38818026 CLK3 chr15 74919753 Exonic hg19 NA BF884316 Out-of-frame Inter-chr q22.13 CMGC:DYRK q24.1 CMGC:CLK 123826 ChimerSeq ChiTaRs ChiTaRs SLC8A2-DHX34 SLC8A2 chr19 47975270 DHX34 chr19 47885235 Exonic hg19 NA DA080126 Out-of-frame Intra-chr q13.32 q13.32 123827 ChimerSeq ChiTaRs ChiTaRs SPG11-CHRM3 SPG11 chr15 44876259 CHRM3 chr1 239903756 Exonic hg19 NA AW812006 Out-of-frame Inter-chr q21.1 q43 123828 ChimerSeq ChiTaRs ChiTaRs CYTH1-RASA3 CYTH1 chr17 76713890 RASA3 chr13 114782713 Exonic hg19 NA BF088116 Out-of-frame Inter-chr q25.3 123829 ChimerSeq ChiTaRs ChiTaRs NHLRC3-PROSER1 NHLRC3 chr13 39613849 PROSER1 chr13 39598613 Exonic hg19 NA BI031416 Out-of-frame Intra-chr q13.3 q13.3 123830 ChimerSeq ChiTaRs ChiTaRs RASAL3-LOC145837 RASAL3 chr19 15562592 LOC145837 chr15 69819487 Exonic hg19 NA DB342796 Out-of-frame Inter-chr p13.12 123831 ChimerSeq ChiTaRs ChiTaRs TMBIM6-TMBIM6 TMBIM6 chr12 50156788 TMBIM6 chr12 50152163 Exonic hg19 NA BM984466 Out-of-frame Intra-chr q13.12 q13.12 123832 ChimerSeq ChiTaRs ChiTaRs ASNA1-ASNA1 ASNA1 chr19 12858839 ASNA1 chr19 12858060 Exonic hg19 NA CN270486 Out-of-frame Intra-chr p13.13 p13.13 123833 ChimerSeq ChiTaRs ChiTaRs SNX19-ACTA1 SNX19 chr11 130747108 ACTA1 chr1 229566992 Exonic hg19 NA BP316776 3'UTR-5'UTR Inter-chr q25 q42.13 123834 ChimerSeq ChiTaRs ChiTaRs BCO2-MYLPF BCO2 chr11 112064380 MYLPF chr16 30388975 Exonic hg19 NA F00366 Out-of-frame Inter-chr q23.1 p11.2 123835 ChimerSeq ChiTaRs ChiTaRs AAGAB-AAGAB AAGAB chr15 67514953 AAGAB chr15 67516726 Exonic hg19 NA BE676486 Out-of-frame Intra-chr q23 q23 123836 ChimerSeq ChiTaRs ChiTaRs XAB2-FBXL13 XAB2 chr19 7692327 FBXL13 chr7 102560487 Exonic hg19 NA BQ355746 Out-of-frame Inter-chr p13.2 q22.1 Tumor suppressor gene 123837 ChimerSeq ChiTaRs ChiTaRs HSPA8-INADL HSPA8 chr11 122929439 INADL chr1 62390453 Exonic hg19 NA BE771086 Out-of-frame Inter-chr q24.1 123838 ChimerSeq ChiTaRs ChiTaRs KLHL10-GNPDA1 KLHL10 chr17 40001339 GNPDA1 chr5 141380648 Exonic hg19 NA BE162856 Out-of-frame Inter-chr q21.2 q31.3 123839 ChimerSeq ChiTaRs ChiTaRs MLYCD-MLYCD MLYCD chr16 83935519 MLYCD chr16 83935205 Exonic hg19 NA BF805316 Out-of-frame Intra-chr q23.3 q23.3 123840 ChimerSeq ChiTaRs ChiTaRs MBD6-TLN1 MBD6 chr12 57923099 TLN1 chr9 35698651 Exonic hg19 NA BG983096 Out-of-frame Inter-chr q13.3 Transcription factor p13.3 123841 ChimerSeq ChiTaRs ChiTaRs IGFBP4-TNKS1BP1 IGFBP4 chr17 38613889 TNKS1BP1 chr11 57076360 Exonic hg19 NA BF756786 Out-of-frame Inter-chr q21.2 Tumor suppressor gene q12.1 123842 ChimerSeq ChiTaRs ChiTaRs PSMC5-ALDH4A1 PSMC5 chr17 61909379 ALDH4A1 chr1 19198500 Exonic hg19 NA DB320226 Out-of-frame Inter-chr q23.3 p36.13 123843 ChimerSeq ChiTaRs ChiTaRs ERGIC3-ERGIC3 ERGIC3 chr20 34135219 ERGIC3 chr20 34143976 Exonic hg19 NA BI039286 Out-of-frame Intra-chr q11.22 q11.22 123844 ChimerSeq ChiTaRs ChiTaRs PIAS2-PIAS2 PIAS2 chr18 44400928 PIAS2 chr18 44400956 Exonic hg19 NA AA244416 Out-of-frame Intra-chr q21.1 q21.1 123845 ChimerSeq ChiTaRs ChiTaRs AGAP2-IL11 AGAP2 chr12 58122128 IL11 chr19 55877003 Exonic hg19 NA BM893846 Out-of-frame Inter-chr q14.1 q13.42 123846 ChimerSeq ChiTaRs ChiTaRs TSC22D1-TSC22D1 TSC22D1 chr13 45007963 TSC22D1 chr13 45007963 Exonic hg19 NA AA593046 Out-of-frame Intra-chr q14.11 Tumor suppressor gene Transcription factor q14.11 Tumor suppressor gene Transcription factor 123847 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65267223 MALAT1 chr11 65266874 Exonic hg19 NA BU674886 Out-of-frame Intra-chr q13.1 q13.1 123848 ChimerSeq ChiTaRs ChiTaRs ITGB4-PLSCR1 ITGB4 chr17 73748632 PLSCR1 chr3 146239375 Exonic hg19 NA AW369496 Out-of-frame Inter-chr q25.1 q24 Transcription factor 123849 ChimerSeq ChiTaRs ChiTaRs PPP6R2-PPP1R13L PPP6R2 chr22 50810580 PPP1R13L chr19 45889323 Exonic hg19 NA BM847416 Out-of-frame Inter-chr q13.33 q13.32 123850 ChimerSeq ChiTaRs ChiTaRs NPIPA1-DDX46 NPIPA1 chr16 15044557 DDX46 chr5 134104188 Exonic hg19 NA AB075516 Out-of-frame Inter-chr q31.1 123851 ChimerSeq ChiTaRs ChiTaRs MBP-GNB1 MBP chr18 74725205 GNB1 chr1 1718399 Exonic hg19 NA BG315176 Out-of-frame Inter-chr q23 p36.33 123852 ChimerSeq ChiTaRs ChiTaRs LHFP-REEP4 LHFP chr13 39917787 REEP4 chr8 21995643 Exonic hg19 NA BE122646 Out-of-frame Inter-chr q14.11 p21.3 123853 ChimerSeq ChiTaRs ChiTaRs DPP8-DPP8 DPP8 chr15 65747162 DPP8 chr15 65746208 Exonic hg19 NA CD367446 Out-of-frame Intra-chr q22.31 q22.31 123854 ChimerSeq ChiTaRs ChiTaRs PRMT1-C10orf118 PRMT1 chr19 50189401 C10orf118 chr10 115890444 Exonic hg19 NA BF924286 Out-of-frame Inter-chr q13.33 123855 ChimerSeq ChiTaRs ChiTaRs HOXB3-PTK2 HOXB3 chr17 46627701 PTK2 chr8 141828376 Exonic hg19 NA CN373156 Out-of-frame Inter-chr q21.32 Transcription factor q24.3 123856 ChimerSeq ChiTaRs ChiTaRs ALDH3A1-ASPH ALDH3A1 chr17 19641367 ASPH chr8 62574298 Exonic hg19 NA BU679486 Out-of-frame Inter-chr p11.2 q12.3 123857 ChimerSeq ChiTaRs ChiTaRs TRIM9-DNAJA2 TRIM9 chr14 51443336 DNAJA2 chr16 46990804 Exonic hg19 NA BQ340966 Out-of-frame Inter-chr q22.1 q11.2 123858 ChimerSeq ChiTaRs ChiTaRs MEN1-ATP5G2 MEN1 chr11 64571527 ATP5G2 chr12 54059186 Exonic hg19 NA BF798946 Out-of-frame Inter-chr q13.1 Oncogene Tumor suppressor gene q13.13 123859 ChimerSeq ChiTaRs ChiTaRs RAB40B-RAB40B RAB40B chr17 80615503 RAB40B chr17 80615094 Exonic hg19 NA AA640526 Out-of-frame Intra-chr q25.3 q25.3 123860 ChimerSeq ChiTaRs ChiTaRs DNAJC3-NPC2 DNAJC3 chr13 96445064 NPC2 chr14 74946734 Exonic hg19 NA BE004606 Out-of-frame Inter-chr q32.1 q24.3 123861 ChimerSeq ChiTaRs ChiTaRs ITM2B-ITM2B ITM2B chr13 48835994 ITM2B chr13 48832266 Exonic hg19 NA EB388086 Out-of-frame Intra-chr q14.2 q14.2 123862 ChimerSeq ChiTaRs ChiTaRs CHD4-CHD4 CHD4 chr12 6690326 CHD4 chr12 6679707 Exonic hg19 NA AA639516 Out-of-frame Intra-chr p13.31 p13.31 123863 ChimerSeq ChiTaRs ChiTaRs MED26-USP36 MED26 chr19 16683835 USP36 chr17 76834669 Exonic hg19 NA DA456356 Out-of-frame Inter-chr p13.11 q25.3 123864 ChimerSeq ChiTaRs ChiTaRs SLC38A1-ACTR3 SLC38A1 chr12 46578574 ACTR3 chr2 114713256 Exonic hg19 NA BE708046 Out-of-frame Inter-chr q13.11 q14.1 123865 ChimerSeq ChiTaRs ChiTaRs STAT6-PALLD STAT6 chr12 57489821 PALLD chr4 169848913 Exonic hg19 NA BG953466 Out-of-frame Inter-chr q13.3 Transcription factor q32.3 123866 ChimerSeq ChiTaRs ChiTaRs PRSS23-PRSS23 PRSS23 chr11 86518934 PRSS23 chr11 86518702 Exonic hg19 NA AW841356 Out-of-frame Intra-chr q14.2 q14.2 123867 ChimerSeq ChiTaRs ChiTaRs RTDR1-RTDR1 RTDR1 chr22 23438093 RTDR1 chr22 23466522 Exonic hg19 NA CB218186 Out-of-frame Intra-chr 123868 ChimerSeq ChiTaRs ChiTaRs ANKFY1-ANKFY1 ANKFY1 chr17 4145124 ANKFY1 chr17 4143652 Exonic hg19 NA BE144976 Out-of-frame Intra-chr p13.2 p13.2 123869 ChimerSeq ChiTaRs ChiTaRs MYO5C-RBM33 MYO5C chr15 52540335 RBM33 chr7 155461668 Exonic hg19 NA BF834846 Out-of-frame Inter-chr q21.2 q36.3 123870 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65267322 MALAT1 chr11 65267411 Exonic hg19 NA BQ632546 Out-of-frame Intra-chr q13.1 q13.1 123871 ChimerSeq ChiTaRs ChiTaRs ACAT1-VPRBP ACAT1 chr11 108008511 VPRBP chr3 51496761 Exonic hg19 NA AK024206 Out-of-frame Inter-chr q22.3 123872 ChimerSeq ChiTaRs ChiTaRs MED21-MED21 MED21 chr12 27182670 MED21 chr12 27182390 Exonic hg19 NA AA662056 Out-of-frame Intra-chr p11.23 p11.23 123873 ChimerSeq ChiTaRs ChiTaRs LINC00483-LINC00483 LINC00483 chr17 48836343 LINC00483 chr17 48838787 Exonic hg19 NA BG959766 Out-of-frame Intra-chr q21.33 q21.33 123874 ChimerSeq ChiTaRs ChiTaRs FCAR-FCAR FCAR chr19 55396717 FCAR chr19 55396772 Exonic hg19 NA BI030876 Out-of-frame Intra-chr 123875 ChimerSeq ChiTaRs ChiTaRs GNPNAT1-STYX GNPNAT1 chr14 53255709 STYX chr14 53241434 Exonic hg19 NA DW412766 Out-of-frame Intra-chr q22.1 q22.1 123876 ChimerSeq ChiTaRs ChiTaRs SLC25A1-FMNL3 SLC25A1 chr22 19163213 FMNL3 chr12 50069340 Exonic hg19 NA AI394736 Out-of-frame Inter-chr q11.21 q13.12 123877 ChimerSeq ChiTaRs ChiTaRs STRAP-STRAP STRAP chr12 16048430 STRAP chr12 16050814 Exonic hg19 NA BI862036 Out-of-frame Intra-chr p12.3 p12.3 123878 ChimerSeq ChiTaRs ChiTaRs PARN-MALAT1 PARN chr16 14723490 MALAT1 chr11 65270148 Exonic hg19 NA BG572766 Out-of-frame Inter-chr q13.1 123879 ChimerSeq ChiTaRs ChiTaRs RPL27-RPL27 RPL27 chr17 41154975 RPL27 chr17 41150801 Exonic hg19 NA BC021886 Out-of-frame Intra-chr q21.31 q21.31 123880 ChimerSeq ChiTaRs ChiTaRs YES1-SETD3 YES1 chr18 721932 SETD3 chr14 99892308 Exonic hg19 NA AI810066 Out-of-frame Inter-chr p11.32 q32.2 123881 ChimerSeq ChiTaRs ChiTaRs ATP5G2-ATP5G2 ATP5G2 chr12 54066794 ATP5G2 chr12 54066458 Exonic hg19 NA BF768786 Out-of-frame Intra-chr q13.13 q13.13 123882 ChimerSeq ChiTaRs ChiTaRs SNHG11-PARP10 SNHG11 chr20 37076141 PARP10 chr8 145051344 Exonic hg19 NA AK097596 Out-of-frame Inter-chr q11.23 q24.3 123883 ChimerSeq ChiTaRs ChiTaRs GATAD2A-ZC3H18 GATAD2A chr19 19547400 ZC3H18 chr16 88698063 Exonic hg19 NA AW935086 Out-of-frame Inter-chr p13.11 Transcription factor q24.2 123884 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65271330 MALAT1 chr11 65271056 Exonic hg19 NA BE767916 Out-of-frame Intra-chr q13.1 q13.1 123885 ChimerSeq ChiTaRs ChiTaRs KLC1-NBPF14 KLC1 chr14 104121062 NBPF14 chr1 145071904 Exonic hg19 NA AA410206 Out-of-frame Inter-chr q32.33 q21.2 123886 ChimerSeq ChiTaRs ChiTaRs KRT4-S100A9 KRT4 chr12 53200693 S100A9 chr1 153330832 Exonic hg19 NA DB325356 Out-of-frame Inter-chr q13.13 q21.3 123887 ChimerSeq ChiTaRs ChiTaRs CLDN5-PTMS CLDN5 chr22 19510838 PTMS chr12 6880050 Exonic hg19 NA BM986976 Out-of-frame Inter-chr q11.21 p13.31 123888 ChimerSeq ChiTaRs ChiTaRs TCF20-TCF20 TCF20 chr22 42556269 TCF20 chr22 42557228 Exonic hg19 NA AW134986 Out-of-frame Intra-chr Transcription factor Transcription factor 123889 ChimerSeq ChiTaRs ChiTaRs PA2G4-JAK1 PA2G4 chr12 56507682 JAK1 chr1 65362706 Exonic hg19 NA CV396726 Out-of-frame Inter-chr q13.2 Transcription factor p31.3 TK:JakA Oncogene 123890 ChimerSeq ChiTaRs ChiTaRs CRYL1-TCF25 CRYL1 chr13 21045366 TCF25 chr16 89944966 Exonic hg19 NA AW391896 Out-of-frame Inter-chr q12.11 q24.3 123891 ChimerSeq ChiTaRs ChiTaRs RHBDF1-RHBDF1 RHBDF1 chr16 112376 RHBDF1 chr16 113110 Exonic hg19 NA AI907156 Out-of-frame Intra-chr p13.3 p13.3 123892 ChimerSeq ChiTaRs ChiTaRs S1PR5-S1PR5 S1PR5 chr19 10628114 S1PR5 chr19 10625301 Exonic hg19 NA BP193336 Out-of-frame Intra-chr p13.2 p13.2 123893 ChimerSeq ChiTaRs ChiTaRs FLI1-FLI1 FLI1 chr11 128591097 FLI1 chr11 128590408 Exonic hg19 NA BM720416 Out-of-frame Intra-chr q24.3 Oncogene Transcription factor q24.3 Oncogene Transcription factor 123894 ChimerSeq ChiTaRs ChiTaRs ACKR2-RUNX1 ACKR2 chr17 40832420 RUNX1 chr21 36259343 Exonic hg19 NA DB320986 Out-of-frame Inter-chr p22.1 q22.12 Oncogene Tumor suppressor gene Transcription factor 123895 ChimerSeq ChiTaRs ChiTaRs PHLDB1-TEAD2 PHLDB1 chr11 118498210 TEAD2 chr19 49845951 Exonic hg19 NA BG983176 Out-of-frame Inter-chr q23.3 q13.33 Transcription factor 123896 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65267312 MALAT1 chr11 65269445 Exonic hg19 NA BU784876 Out-of-frame Intra-chr q13.1 q13.1 123897 ChimerSeq ChiTaRs ChiTaRs ECH1-ECH1 ECH1 chr19 39306170 ECH1 chr19 39306535 Exonic hg19 NA BF911176 Out-of-frame Intra-chr 123898 ChimerSeq ChiTaRs ChiTaRs SSH1-SSH1 SSH1 chr12 109177289 SSH1 chr12 109176848 Exonic hg19 NA AA480626 Out-of-frame Intra-chr q24.11 q24.11 123899 ChimerSeq ChiTaRs ChiTaRs ATPAF2-LRRC48 ATPAF2 chr17 17931017 LRRC48 chr17 17919836 Exonic hg19 NA AW502176 Out-of-frame Intra-chr p11.2 123900 ChimerSeq ChiTaRs ChiTaRs TRIM29-TRIM29 TRIM29 chr11 119996549 TRIM29 chr11 119996568 Exonic hg19 NA BF842536 Out-of-frame Intra-chr q23.3 q23.3 123901 ChimerSeq ChiTaRs ChiTaRs ADPGK-ADPGK ADPGK chr15 73043801 ADPGK chr15 73043757 Exonic hg19 NA BU676386 Out-of-frame Intra-chr q24.1 q24.1 123902 ChimerSeq ChiTaRs ChiTaRs COX6B1-B2M COX6B1 chr19 36149684 B2M chr15 45007788 Exonic hg19 NA BU078026 Out-of-frame Inter-chr q13.12 Oncogene 123903 ChimerSeq ChiTaRs ChiTaRs TTLL5-NAPA TTLL5 chr14 76129543 NAPA chr19 48006703 Exonic hg19 NA BG984526 Out-of-frame Inter-chr q24.3 q13.33 123904 ChimerSeq ChiTaRs ChiTaRs SYT1-AQP4 SYT1 chr12 79274150 AQP4 chr18 24435478 Exonic hg19 NA U34846 Out-of-frame Inter-chr q21.2 q11.2 123905 ChimerSeq ChiTaRs ChiTaRs COX8A-AGFG1 COX8A chr11 63744014 AGFG1 chr2 228424087 Exonic hg19 NA AA292136 Out-of-frame Inter-chr q13.1 q36.3 123906 ChimerSeq ChiTaRs ChiTaRs DNM1L-RPL37A DNM1L chr12 32897354 RPL37A chr2 217366103 Exonic hg19 NA BC000136 Out-of-frame Inter-chr p11.21 q35 123907 ChimerSeq ChiTaRs ChiTaRs PHF12-PHF12 PHF12 chr17 27239993 PHF12 chr17 27240004 Exonic hg19 NA BF823276 Out-of-frame Intra-chr q11.2 q11.2 123908 ChimerSeq ChiTaRs ChiTaRs PANK2-ACACB PANK2 chr20 3873602 ACACB chr12 109625921 Exonic hg19 NA BF375856 Out-of-frame Inter-chr p13 q24.11 123909 ChimerSeq ChiTaRs ChiTaRs CTDSPL2-CTDSPL2 CTDSPL2 chr15 44725531 CTDSPL2 chr15 44730049 Exonic hg19 NA AA007396 Out-of-frame Intra-chr q15.3 q15.3 123910 ChimerSeq ChiTaRs ChiTaRs SNX19-CHRDL1 SNX19 chr11 130780158 CHRDL1 chrX 109917440 Exonic hg19 NA AA029156 Out-of-frame Inter-chr q25 q23 123911 ChimerSeq ChiTaRs ChiTaRs YLPM1-MAGEA8 YLPM1 chr14 75264461 MAGEA8 chrX 149009985 Exonic hg19 NA DA831846 Out-of-frame Inter-chr q24.3 q28 123912 ChimerSeq ChiTaRs ChiTaRs LMO7-HLTF LMO7 chr13 76423426 HLTF chr3 148747914 Exonic hg19 NA Z46606 Out-of-frame Inter-chr q22.2 q24 Tumor suppressor gene 123913 ChimerSeq ChiTaRs ChiTaRs MRPS34-PRKDC MRPS34 chr16 1822063 PRKDC chr8 48685673 Exonic hg19 NA AI634126 Out-of-frame Inter-chr p13.3 q11.21 Oncogene 123914 ChimerSeq ChiTaRs ChiTaRs UBE2V1-SRP9 UBE2V1 chr20 48699046 SRP9 chr1 225973720 Exonic hg19 NA AW361026 Out-of-frame Inter-chr q13.13 q42.12 123915 ChimerSeq ChiTaRs ChiTaRs LYZ-ZZZ3 LYZ chr12 69747637 ZZZ3 chr1 78036110 Exonic hg19 NA BE042786 Out-of-frame Inter-chr q15 p31.1 Transcription factor 123916 ChimerSeq ChiTaRs ChiTaRs FBLN1-H19 FBLN1 chr22 45958886 H19 chr11 2016807 Exonic hg19 NA BG005486 Out-of-frame Inter-chr q13.31 Tumor suppressor gene p15.5 Tumor suppressor gene 123917 ChimerSeq ChiTaRs ChiTaRs MYH14-MYH14 MYH14 chr19 50813312 MYH14 chr19 50794235 Exonic hg19 NA BG984016 Out-of-frame Intra-chr q13.33 q13.33 123918 ChimerSeq ChiTaRs ChiTaRs PFN1-TMEM214 PFN1 chr17 4849986 TMEM214 chr2 27262547 Exonic hg19 NA BQ361296 Out-of-frame Inter-chr p13.2 Tumor suppressor gene p23.3 123919 ChimerSeq ChiTaRs ChiTaRs ATP2A2-ATP2A2 ATP2A2 chr12 110784189 ATP2A2 chr12 110787709 Exonic hg19 NA BF673146 Out-of-frame Intra-chr q24.11 q24.11 123920 ChimerSeq ChiTaRs ChiTaRs ZNF629-RAB7A ZNF629 chr16 30789857 RAB7A chr3 128532429 Exonic hg19 NA BE855536 Out-of-frame Inter-chr p11.2 Transcription factor q21.3 Tumor suppressor gene 123921 ChimerSeq ChiTaRs ChiTaRs CHURC1-PSMD3 CHURC1 chr14 65406426 PSMD3 chr17 38146010 Exonic hg19 NA AW376286 Out-of-frame Inter-chr q23.3 q21.1 123922 ChimerSeq ChiTaRs ChiTaRs SMOC1-SMOC1 SMOC1 chr14 70470824 SMOC1 chr14 70470516 Exonic hg19 NA BF955356 Out-of-frame Intra-chr q24.2 q24.2 123923 ChimerSeq ChiTaRs ChiTaRs MYO1E-HCFC1 MYO1E chr15 59445873 HCFC1 chrX 153229873 Exonic hg19 NA BF835836 Out-of-frame Inter-chr q22.2 q28 123924 ChimerSeq ChiTaRs ChiTaRs SERPINF1-PSMB8 SERPINF1 chr17 1680857 PSMB8 chr6 4239280 Exonic hg19 NA AI280186 Out-of-frame Inter-chr p21.32 123925 ChimerSeq ChiTaRs ChiTaRs C17orf85-C17orf85 C17orf85 chr17 3716570 C17orf85 chr17 3729396 Exonic hg19 NA BX281026 Out-of-frame Intra-chr 123926 ChimerSeq ChiTaRs ChiTaRs ZNF814-ZNF814 ZNF814 chr19 58380496 ZNF814 chr19 58376374 Exonic hg19 NA AA744506 Out-of-frame Intra-chr q13.43 Transcription factor q13.43 Transcription factor 123927 ChimerSeq ChiTaRs ChiTaRs DSCAM-TMOD1 DSCAM chr21 41956084 TMOD1 chr9 100362362 Exonic hg19 NA AF131836 Out-of-frame Inter-chr q22.2 q22.33 123928 ChimerSeq ChiTaRs ChiTaRs C17orf76-AS1-NCALD C17orf76-AS1 chr17 16344851 NCALD chr8 102699796 Exonic hg19 NA BP347756 Out-of-frame Inter-chr q22.3 Tumor suppressor gene 123929 ChimerSeq ChiTaRs ChiTaRs HAUS5-HAUS5 HAUS5 chr19 36113917 HAUS5 chr19 36103662 Exonic hg19 NA DN994236 Out-of-frame Intra-chr q13.12 q13.12 123930 ChimerSeq ChiTaRs ChiTaRs CD97-SDC3 CD97 chr19 14518974 SDC3 chr1 31344486 Exonic hg19 NA BE925576 Out-of-frame Inter-chr p35.2 123931 ChimerSeq ChiTaRs ChiTaRs PDE3A-CENPF PDE3A chr12 20597960 CENPF chr1 214822023 Exonic hg19 NA AF118076 Out-of-frame Inter-chr p12.2 q41 123932 ChimerSeq ChiTaRs ChiTaRs NF2-NF2 NF2 chr22 30091773 NF2 chr22 30092211 Exonic hg19 NA BF666966 Out-of-frame Intra-chr q12.2 Oncogene Tumor suppressor gene q12.2 Oncogene Tumor suppressor gene 123933 ChimerSeq ChiTaRs ChiTaRs SIDT2-SIDT2 SIDT2 chr11 117063078 SIDT2 chr11 117061397 Exonic hg19 NA BF352676 Out-of-frame Intra-chr q23.3 q23.3 123934 ChimerSeq ChiTaRs ChiTaRs C1S-C1S C1S chr12 7168134 C1S chr12 7169140 Exonic hg19 NA X06596 Out-of-frame Intra-chr p13.31 p13.31 123935 ChimerSeq ChiTaRs ChiTaRs HOXB8-DIAPH1 HOXB8 chr17 46690096 DIAPH1 chr5 140910549 Exonic hg19 NA BX951816 Out-of-frame Inter-chr q21.32 Transcription factor q31.3 123936 ChimerSeq ChiTaRs ChiTaRs UPF3A-PRMT3 UPF3A chr13 115064222 PRMT3 chr11 20530649 Exonic hg19 NA BE695866 Out-of-frame Inter-chr q34 p15.1 Transcription factor 123937 ChimerSeq ChiTaRs ChiTaRs POP4-LCN2 POP4 chr19 30106614 LCN2 chr9 130912565 Exonic hg19 NA AA076566 Out-of-frame Inter-chr q12 q34.11 123938 ChimerSeq ChiTaRs ChiTaRs ERCC1-TNRC18 ERCC1 chr19 45977372 TNRC18 chr7 5394025 Exonic hg19 NA BF853556 Out-of-frame Inter-chr q13.32 Oncogene p22.1 123939 ChimerSeq ChiTaRs ChiTaRs ABCA3-ABCA3 ABCA3 chr16 2371011 ABCA3 chr16 2371589 Exonic hg19 NA AV706856 Out-of-frame Intra-chr p13.3 p13.3 123940 ChimerSeq ChiTaRs ChiTaRs ADAP2-GSTZ1 ADAP2 chr17 29285233 GSTZ1 chr14 77787427 Exonic hg19 NA AI636936 Out-of-frame Inter-chr q11.2 q24.3 123941 ChimerSeq ChiTaRs ChiTaRs TCF20-TCF20 TCF20 chr22 42556269 TCF20 chr22 42557318 Exonic hg19 NA BE218956 Out-of-frame Intra-chr Transcription factor Transcription factor 123942 ChimerSeq ChiTaRs ChiTaRs NCAM1-CDK5RAP2 NCAM1 chr11 113133593 CDK5RAP2 chr9 123165458 Exonic hg19 NA BI038396 Out-of-frame Inter-chr q23.2 q33.2 123943 ChimerSeq ChiTaRs ChiTaRs NAE1-NAE1 NAE1 chr16 66847556 NAE1 chr16 66847472 Exonic hg19 NA AA165566 Out-of-frame Intra-chr q22.1 q22.1 123944 ChimerSeq ChiTaRs ChiTaRs PIBF1-ITGB1BP1 PIBF1 chr13 73428818 ITGB1BP1 chr2 9546796 Exonic hg19 NA CN414976 Out-of-frame Inter-chr q21.33 p25.1 123945 ChimerSeq ChiTaRs ChiTaRs DLGAP4-DLGAP4 DLGAP4 chr20 35128717 DLGAP4 chr20 35128117 Exonic hg19 NA AV707446 Out-of-frame Intra-chr q11.23 q11.23 123946 ChimerSeq ChiTaRs ChiTaRs SIN3A-DHODH SIN3A chr15 75663568 DHODH chr16 72048450 Exonic hg19 NA AW006026 Out-of-frame Inter-chr q24.2 q22.2 123947 ChimerSeq ChiTaRs ChiTaRs MEF2A-GLG1 MEF2A chr15 100210538 GLG1 chr16 74483796 Exonic hg19 NA BQ722566 Out-of-frame Inter-chr q26.3 Transcription factor q23.1 123948 ChimerSeq ChiTaRs ChiTaRs BFAR-BFAR BFAR chr16 14749019 BFAR chr16 14749017 Exonic hg19 NA BQ424556 Out-of-frame Intra-chr 123949 ChimerSeq ChiTaRs ChiTaRs PRPF6-PRPF6 PRPF6 chr20 62616359 PRPF6 chr20 62641617 Exonic hg19 NA AI620966 Out-of-frame Intra-chr q13.33 q13.33 123950 ChimerSeq ChiTaRs ChiTaRs TERF2IP-TERF2IP TERF2IP chr16 75691330 TERF2IP chr16 75690850 Exonic hg19 NA AA113346 Out-of-frame Intra-chr q23.1 q23.1 123951 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65267333 MALAT1 chr11 65266763 Exonic hg19 NA DW419196 Out-of-frame Intra-chr q13.1 q13.1 123952 ChimerSeq ChiTaRs ChiTaRs L3MBTL4-CIAO1 L3MBTL4 chr18 6414841 CIAO1 chr2 96938354 Exonic hg19 NA AK098406 Out-of-frame Inter-chr p11.31 Tumor suppressor gene Transcription factor q11.2 123953 ChimerSeq ChiTaRs ChiTaRs FERMT1-RBBP7 FERMT1 chr20 6055568 RBBP7 chrX 16862858 Exonic hg19 NA AW054656 Out-of-frame Inter-chr p12.3 p22.2 Tumor suppressor gene 123954 ChimerSeq ChiTaRs ChiTaRs LIG3-LIG3 LIG3 chr17 33321419 LIG3 chr17 33323080 Exonic hg19 NA BQ306956 Out-of-frame Intra-chr q12 Tumor suppressor gene q12 Tumor suppressor gene 123955 ChimerSeq ChiTaRs ChiTaRs RRBP1-RRBP1 RRBP1 chr20 17594865 RRBP1 chr20 17614762 Exonic hg19 NA BG984836 Out-of-frame Intra-chr p12.1 p12.1 123956 ChimerSeq ChiTaRs ChiTaRs UNKL-PANX2 UNKL chr16 1427855 PANX2 chr22 50617619 Exonic hg19 NA H18396 Out-of-frame Inter-chr p13.3 q13.33 Tumor suppressor gene 123957 ChimerSeq ChiTaRs ChiTaRs POLR2I-DBI POLR2I chr19 36604957 DBI chr2 120124574 Exonic hg19 NA AA165636 Out-of-frame Inter-chr q13.12 q14.2 123958 ChimerSeq ChiTaRs ChiTaRs CA12-CA12 CA12 chr15 63616064 CA12 chr15 63616294 Exonic hg19 NA CA312936 Out-of-frame Intra-chr q22.2 q22.2 123959 ChimerSeq ChiTaRs ChiTaRs USP14-CREG2 USP14 chr18 211366 CREG2 chr2 101998022 Exonic hg19 NA BG179286 Out-of-frame Inter-chr p11.32 q11.2 123960 ChimerSeq ChiTaRs ChiTaRs TEX26-SNRPN TEX26 chr13 31549637 SNRPN chr15 25247443 Exonic hg19 NA BU609006 Out-of-frame Inter-chr q12.3 q11.2 123961 ChimerSeq ChiTaRs ChiTaRs YLPM1-YLPM1 YLPM1 chr14 75265090 YLPM1 chr14 75265098 Exonic hg19 NA BI018976 Out-of-frame Intra-chr q24.3 q24.3 123962 ChimerSeq ChiTaRs ChiTaRs ZBTB16-ZBTB16 ZBTB16 chr11 113958035 ZBTB16 chr11 113957798 Exonic hg19 NA AW973946 Out-of-frame Intra-chr q23.2 Tumor suppressor gene Transcription factor q23.2 Tumor suppressor gene Transcription factor 123963 ChimerSeq ChiTaRs ChiTaRs PLCB3-FAM65A PLCB3 chr11 64032217 FAM65A chr16 67576722 Exonic hg19 NA AA323946 Out-of-frame Inter-chr q13.1 Tumor suppressor gene 123964 ChimerSeq ChiTaRs ChiTaRs ICAM1-ABCF3 ICAM1 chr19 10396293 ABCF3 chr3 183911712 Exonic hg19 NA BF916346 Out-of-frame Inter-chr p13.2 q27.1 123965 ChimerSeq ChiTaRs ChiTaRs OAF-ARHGEF1 OAF chr11 120097629 ARHGEF1 chr19 42421352 Exonic hg19 NA BQ373966 Out-of-frame Inter-chr q23.3 q13.2 123966 ChimerSeq ChiTaRs ChiTaRs SDC4-SDC4 SDC4 chr20 43955781 SDC4 chr20 43955777 Exonic hg19 NA BQ312086 Out-of-frame Intra-chr q13.12 q13.12 123967 ChimerSeq ChiTaRs ChiTaRs ABAT-PSMD12 ABAT chr16 8865922 PSMD12 chr17 65351510 Exonic hg19 NA BF064196 Out-of-frame Inter-chr p13.2 q24.2 123968 ChimerSeq ChiTaRs ChiTaRs C11orf68-EDC4 C11orf68 chr11 65684545 EDC4 chr16 67916607 Exonic hg19 NA BF961366 Out-of-frame Inter-chr q13.1 q22.1 123969 ChimerSeq ChiTaRs ChiTaRs CHD2-CHD2 CHD2 chr15 93570004 CHD2 chr15 93570051 Exonic hg19 NA AI909166 Out-of-frame Intra-chr q26.1 q26.1 123970 ChimerSeq ChiTaRs ChiTaRs CSE1L-CSE1L CSE1L chr20 47712949 CSE1L chr20 47708638 Exonic hg19 NA BU074286 Out-of-frame Intra-chr q13.13 q13.13 123971 ChimerSeq ChiTaRs ChiTaRs YWHAB-YWHAB YWHAB chr20 43535789 YWHAB chr20 43535783 Exonic hg19 NA BE547046 Out-of-frame Intra-chr q13.12 q13.12 123972 ChimerSeq ChiTaRs ChiTaRs UBE2V1-UBE2V1 UBE2V1 chr20 48709923 UBE2V1 chr20 48709900 Exonic hg19 NA AW807836 Out-of-frame Intra-chr q13.13 q13.13 123973 ChimerSeq ChiTaRs ChiTaRs IGLON5-ZNF503 IGLON5 chr19 51832239 ZNF503 chr10 77158234 Exonic hg19 NA BU730256 Out-of-frame Inter-chr q13.41 q22.2 Transcription factor 123974 ChimerSeq ChiTaRs ChiTaRs DHX8-SRPK2 DHX8 chr17 41598318 SRPK2 chr7 104920151 Exonic hg19 NA AW364116 Out-of-frame Inter-chr q21.31 q22.3 CMGC:SRPK 123975 ChimerSeq ChiTaRs ChiTaRs COPE-PLXNB1 COPE chr19 19030184 PLXNB1 chr3 48445262 Exonic hg19 NA AK126476 Out-of-frame Inter-chr p13.11 p21.31 123976 ChimerSeq ChiTaRs ChiTaRs MYO7A-MYO7A MYO7A chr11 76919808 MYO7A chr11 76922267 Exonic hg19 NA BI050206 Out-of-frame Intra-chr q13.5 q13.5 123977 ChimerSeq ChiTaRs ChiTaRs MYH14-SEC31B MYH14 chr19 50807844 SEC31B chr10 102281741 Exonic hg19 NA BE149136 Out-of-frame Inter-chr q13.33 q24.31 123978 ChimerSeq ChiTaRs ChiTaRs TNNC2-TNNC2 TNNC2 chr20 44452693 TNNC2 chr20 44452686 Exonic hg19 NA BF672376 Out-of-frame Intra-chr q13.12 q13.12 123979 ChimerSeq ChiTaRs ChiTaRs N4BP2L2-ADAMTS3 N4BP2L2 chr13 33095574 ADAMTS3 chr4 73284951 Exonic hg19 NA BQ332326 Out-of-frame Inter-chr q13.1 q13.3 123980 ChimerSeq ChiTaRs ChiTaRs FXYD6-FXYD2-FXYD6-FXYD2 FXYD6-FXYD2 chr11 117709425 FXYD6-FXYD2 chr11 117708679 Exonic hg19 NA BQ771776 Out-of-frame Intra-chr q23.3 q23.3 123981 ChimerSeq ChiTaRs ChiTaRs GFAP-CPVL GFAP chr17 42992858 CPVL chr7 29234575 Exonic hg19 NA L29126 Out-of-frame Inter-chr q21.31 p14.3 123982 ChimerSeq ChiTaRs ChiTaRs SLC25A45-CAMTA1 SLC25A45 chr11 65150134 CAMTA1 chr1 6988111 Exonic hg19 NA BU930096 Out-of-frame Inter-chr q13.1 p36.31 Tumor suppressor gene Transcription factor 123983 ChimerSeq ChiTaRs ChiTaRs VWF-ACTN1 VWF chr12 6094272 ACTN1 chr14 69392261 Exonic hg19 NA AA327436 Out-of-frame Inter-chr p13.31 q24.1 123984 ChimerSeq ChiTaRs ChiTaRs CTTN-FAM153A CTTN chr11 70275080 FAM153A chr5 177138855 Exonic hg19 NA AW388086 Out-of-frame Inter-chr q13.3 q35.3 123985 ChimerSeq ChiTaRs ChiTaRs SARS2-SARS2 SARS2 chr19 39406092 SARS2 chr19 39406083 Exonic hg19 NA AA630836 Out-of-frame Intra-chr 123986 ChimerSeq ChiTaRs ChiTaRs ZNF410-FSTL1 ZNF410 chr14 74363069 FSTL1 chr3 120115801 Exonic hg19 NA DB252176 Out-of-frame Inter-chr q24.3 Transcription factor q13.33 123987 ChimerSeq ChiTaRs ChiTaRs CMIP-CMIP CMIP chr16 81743850 CMIP chr16 81743853 Exonic hg19 NA AW505506 Out-of-frame Intra-chr q23.2 q23.2 123988 ChimerSeq ChiTaRs ChiTaRs ZSWIM1-RASEF ZSWIM1 chr20 44513905 RASEF chr9 85673744 Exonic hg19 NA BF058356 3'UTR-CDS Inter-chr q13.12 q21.32 123989 ChimerSeq ChiTaRs ChiTaRs PDPK1-VPS28 PDPK1 chr16 2597923 VPS28 chr8 145649004 Exonic hg19 NA AK129716 Out-of-frame Inter-chr p13.3 q24.3 123990 ChimerSeq ChiTaRs ChiTaRs DECR2-DDX10 DECR2 chr16 460202 DDX10 chr11 108727133 Exonic hg19 NA EL582516 Out-of-frame Inter-chr q22.3 123991 ChimerSeq ChiTaRs ChiTaRs PRDM10-PPM1B PRDM10 chr11 129795961 PPM1B chr2 44428360 Exonic hg19 NA DA528196 Out-of-frame Inter-chr q24.3 Transcription factor p21 123992 ChimerSeq ChiTaRs ChiTaRs LOC100499227-LOC100499227 LOC100499227 chr11 119289587 LOC100499227 chr11 119289175 Exonic hg19 NA R73026 Out-of-frame Intra-chr 123993 ChimerSeq ChiTaRs ChiTaRs KCTD10-BMP1 KCTD10 chr12 109888974 BMP1 chr8 22058288 Exonic hg19 NA BQ370786 Out-of-frame Inter-chr q24.11 p21.3 123994 ChimerSeq ChiTaRs ChiTaRs RLBP1-RLBP1 RLBP1 chr15 89762220 RLBP1 chr15 89762211 Exonic hg19 NA W28826 Out-of-frame Intra-chr q26.1 q26.1 123995 ChimerSeq ChiTaRs ChiTaRs TSPAN3-TSPAN3 TSPAN3 chr15 77348559 TSPAN3 chr15 77339158 Exonic hg19 NA W28286 Out-of-frame Intra-chr q24.3 q24.3 123996 ChimerSeq ChiTaRs ChiTaRs MALAT1-NUPL1 MALAT1 chr11 65268333 NUPL1 chr13 25915777 Exonic hg19 NA BE180526 Out-of-frame Inter-chr q13.1 123997 ChimerSeq ChiTaRs ChiTaRs ATP1A3-SOX4 ATP1A3 chr19 42470950 SOX4 chr6 21596930 Exonic hg19 NA BX478866 Out-of-frame Inter-chr q13.2 p22.3 Transcription factor 123998 ChimerSeq ChiTaRs ChiTaRs BCAT1-SLC9A1 BCAT1 chr12 24968990 SLC9A1 chr1 27429218 Exonic hg19 NA BF996876 Out-of-frame Inter-chr p12.1 p36.11 123999 ChimerSeq ChiTaRs ChiTaRs APOBEC3F-WDR70 APOBEC3F chr22 39448927 WDR70 chr5 37752596 Exonic hg19 NA BU565456 Out-of-frame Inter-chr q13.1 p13.2 124000 ChimerSeq ChiTaRs ChiTaRs ATP6V1D-LEPREL1 ATP6V1D chr14 67819690 LEPREL1 chr3 189828397 Exonic hg19 NA AW945546 Out-of-frame Inter-chr q23.3 124001 ChimerSeq ChiTaRs ChiTaRs ERN2-ERN2 ERN2 chr16 23712335 ERN2 chr16 23716421 Exonic hg19 NA AW375746 Out-of-frame Intra-chr p12.2 p12.2 124002 ChimerSeq ChiTaRs ChiTaRs CTCF-ARF1 CTCF chr16 67618080 ARF1 chr1 228284855 Exonic hg19 NA BF809756 Out-of-frame Inter-chr q22.1 Tumor suppressor gene Transcription factor q42.13 Tumor suppressor gene 124003 ChimerSeq ChiTaRs ChiTaRs LRRC25-ITGAX LRRC25 chr19 18502157 ITGAX chr16 31369105 Exonic hg19 NA CD370606 Out-of-frame Inter-chr p13.11 p11.2 124004 ChimerSeq ChiTaRs ChiTaRs TIMP2-KIAA1199 TIMP2 chr17 76849646 KIAA1199 chr15 81203798 Exonic hg19 NA BE835006 Out-of-frame Inter-chr q25.3 124005 ChimerSeq ChiTaRs ChiTaRs SMARCA4-SMARCA4 SMARCA4 chr19 11105645 SMARCA4 chr19 11099993 Exonic hg19 NA BQ223626 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 Oncogene Tumor suppressor gene 124006 ChimerSeq ChiTaRs ChiTaRs PPP2R5E-PPP2R5E PPP2R5E chr14 63987257 PPP2R5E chr14 63987343 Exonic hg19 NA BF988116 Out-of-frame Intra-chr q23.2 q23.2 124007 ChimerSeq ChiTaRs ChiTaRs PICALM-BRDT PICALM chr11 85701967 BRDT chr1 92444130 Exonic hg19 NA AW367786 Out-of-frame Inter-chr q14.2 p22.1 Atypical:BRD 124008 ChimerSeq ChiTaRs ChiTaRs RPL27-RPL27 RPL27 chr17 41155331 RPL27 chr17 41151948 Exonic hg19 NA BU685466 Out-of-frame Intra-chr q21.31 q21.31 124009 ChimerSeq ChiTaRs ChiTaRs RTEL1-RTEL1 RTEL1 chr20 62328722 RTEL1 chr20 62328711 Exonic hg19 NA BE879166 Out-of-frame Intra-chr q13.33 q13.33 124010 ChimerSeq ChiTaRs ChiTaRs DAZAP2-ACTG1 DAZAP2 chr12 51637108 ACTG1 chr17 79478315 Exonic hg19 NA BE836126 Out-of-frame Inter-chr q13.13 q25.3 124011 ChimerSeq ChiTaRs ChiTaRs NEMF-NEMF NEMF chr14 50262554 NEMF chr14 50295788 Exonic hg19 NA BU541686 Out-of-frame Intra-chr q21.3 q21.3 124012 ChimerSeq ChiTaRs ChiTaRs AARS-HYDIN AARS chr16 70323386 HYDIN chr16 70923492 Exonic hg19 NA BG829246 Out-of-frame Intra-chr q22.1 124013 ChimerSeq ChiTaRs ChiTaRs EHD4-EHD4 EHD4 chr15 42191800 EHD4 chr15 42192031 Exonic hg19 NA AA287066 Out-of-frame Intra-chr q15.1 q15.1 124014 ChimerSeq ChiTaRs ChiTaRs PLA2G15-CD82 PLA2G15 chr16 68294961 CD82 chr11 44638251 Exonic hg19 NA CN480826 3'UTR-CDS Inter-chr q22.1 p11.2 Tumor suppressor gene 124015 ChimerSeq ChiTaRs ChiTaRs HSD11B2-HSD11B2 HSD11B2 chr16 67465798 HSD11B2 chr16 67469208 Exonic hg19 NA BF994136 Out-of-frame Intra-chr q22.1 q22.1 124016 ChimerSeq ChiTaRs ChiTaRs CRYBA1-CCDC152 CRYBA1 chr17 27581512 CCDC152 chr5 42800554 Exonic hg19 NA BM666166 Out-of-frame Inter-chr q11.2 p12 124017 ChimerSeq ChiTaRs ChiTaRs PCBP2-PCBP2 PCBP2 chr12 53861286 PCBP2 chr12 53861356 Exonic hg19 NA BF805026 Out-of-frame Intra-chr q13.13 q13.13 124018 ChimerSeq ChiTaRs ChiTaRs CD68-STK17B CD68 chr17 7485428 STK17B chr2 197000641 Exonic hg19 NA AA279176 Out-of-frame Inter-chr p13.1 q32.3 124019 ChimerSeq ChiTaRs ChiTaRs SPPL2B-SUGP1 SPPL2B chr19 2352967 SUGP1 chr19 19413086 Exonic hg19 NA BE938476 Out-of-frame Intra-chr p13.3 p13.11 124020 ChimerSeq ChiTaRs ChiTaRs MPO-MPO MPO chr17 56353065 MPO chr17 56356967 Exonic hg19 NA BF901556 Out-of-frame Intra-chr q22 q22 124021 ChimerSeq ChiTaRs ChiTaRs C12orf10-C12orf10 C12orf10 chr12 53700889 C12orf10 chr12 53696919 Exonic hg19 NA AW363996 Out-of-frame Intra-chr q13.13 q13.13 124022 ChimerSeq ChiTaRs ChiTaRs TNRC6B-TNRC6B TNRC6B chr22 40643788 TNRC6B chr22 40642474 Exonic hg19 NA N54856 Out-of-frame Intra-chr q13.1 q13.1 124023 ChimerSeq ChiTaRs ChiTaRs MALT1-CYP19A1 MALT1 chr18 56368536 CYP19A1 chr15 51506489 Exonic hg19 NA BF888866 Out-of-frame Inter-chr q21.32 Oncogene q21.2 124024 ChimerSeq ChiTaRs ChiTaRs CECR2-ZFAND3 CECR2 chr22 18022372 ZFAND3 chr6 38114094 Exonic hg19 NA BE144286 Out-of-frame Inter-chr q11.1 p21.2 124025 ChimerSeq ChiTaRs ChiTaRs SPTLC2-SPTLC2 SPTLC2 chr14 77987873 SPTLC2 chr14 77978648 Exonic hg19 NA AW376106 Out-of-frame Intra-chr q24.3 q24.3 124026 ChimerSeq ChiTaRs ChiTaRs MYO19-MYO19 MYO19 chr17 34869145 MYO19 chr17 34868944 Exonic hg19 NA AA053916 Out-of-frame Intra-chr q12 q12 124027 ChimerSeq ChiTaRs ChiTaRs DIAPH3-DIAPH3 DIAPH3 chr13 60348906 DIAPH3 chr13 60348315 Exonic hg19 NA BU960336 Out-of-frame Intra-chr q21.2 q21.2 124028 ChimerSeq ChiTaRs ChiTaRs ZNF207-G3BP1 ZNF207 chr17 30696896 G3BP1 chr5 151183850 Exonic hg19 NA BP429626 Out-of-frame Inter-chr q11.2 Transcription factor q33.1 124029 ChimerSeq ChiTaRs ChiTaRs MACROD2-MACROD2 MACROD2 chr20 14808619 MACROD2 chr20 14806744 Exonic hg19 NA DW425296 Out-of-frame Intra-chr p12.1 p12.1 124030 ChimerSeq ChiTaRs ChiTaRs EIF2S1-EIF2S1 EIF2S1 chr14 67850577 EIF2S1 chr14 67850306 Exonic hg19 NA CA450266 Out-of-frame Intra-chr q23.3 q23.3 124031 ChimerSeq ChiTaRs ChiTaRs RSL1D1-EIF4H RSL1D1 chr16 11933835 EIF4H chr7 73606366 Exonic hg19 NA CN419986 Out-of-frame Inter-chr p13.13 q11.23 124032 ChimerSeq ChiTaRs ChiTaRs PCNT-HNRNPU PCNT chr21 47767183 HNRNPU chr1 245018332 Exonic hg19 NA BE939196 Out-of-frame Inter-chr q22.3 q44 124033 ChimerSeq ChiTaRs ChiTaRs ZNFX1-AS1-CALD1 ZNFX1-AS1 chr20 47895556 CALD1 chr7 134570772 Exonic hg19 NA DA834176 Out-of-frame Inter-chr q33 Tumor suppressor gene 124034 ChimerSeq ChiTaRs ChiTaRs MAPK7-RHOU MAPK7 chr17 19284000 RHOU chr1 228823046 Exonic hg19 NA AW816696 Out-of-frame Inter-chr p11.2 q42.13 124035 ChimerSeq ChiTaRs ChiTaRs NIN-NIN NIN chr14 51187241 NIN chr14 51187278 Exonic hg19 NA BU609146 Out-of-frame Intra-chr q22.1 Oncogene q22.1 Oncogene 124036 ChimerSeq ChiTaRs ChiTaRs BCAS3-SMURF1 BCAS3 chr17 59308954 SMURF1 chr7 98720770 Exonic hg19 NA CD675856 Out-of-frame Inter-chr q23.2 124037 ChimerSeq ChiTaRs ChiTaRs MYO18A-ALB MYO18A chr17 27405893 ALB chr4 74280437 Exonic hg19 NA BG563936 Out-of-frame Inter-chr q11.2 Oncogene q13.3 124038 ChimerSeq ChiTaRs ChiTaRs PVR-ERGIC1 PVR chr19 45153810 ERGIC1 chr5 172379471 Exonic hg19 NA AV709596 Out-of-frame Inter-chr q13.31 q35.1 124039 ChimerSeq ChiTaRs ChiTaRs TTYH2-DCAF5 TTYH2 chr17 72258159 DCAF5 chr14 69544391 Exonic hg19 NA CA428136 Out-of-frame Inter-chr q25.1 q24.1 124040 ChimerSeq ChiTaRs ChiTaRs DCN-DCN DCN chr12 91576581 DCN chr12 91572117 Exonic hg19 NA AI752586 Out-of-frame Intra-chr q21.33 Tumor suppressor gene q21.33 Tumor suppressor gene 124041 ChimerSeq ChiTaRs ChiTaRs AKAP13-SERPINA1 AKAP13 chr15 86078482 SERPINA1 chr14 94844698 Exonic hg19 NA AF113676 Out-of-frame Inter-chr q25.3 q32.13 124042 ChimerSeq ChiTaRs ChiTaRs SLC2A13-PRKAG2 SLC2A13 chr12 40416914 PRKAG2 chr7 151562747 Exonic hg19 NA AK130536 Out-of-frame Inter-chr q12 q36.1 124043 ChimerSeq ChiTaRs ChiTaRs C17orf80-ILF3 C17orf80 chr17 71245098 ILF3 chr19 10781269 Exonic hg19 NA CB218536 Out-of-frame Inter-chr q25.1 p13.2 124044 ChimerSeq ChiTaRs ChiTaRs WNK1-ALDOC WNK1 chr12 987436 ALDOC chr17 26902165 Exonic hg19 NA DA088736 Out-of-frame Inter-chr p13.33 q11.2 124045 ChimerSeq ChiTaRs ChiTaRs HNRNPUL1-PDXDC1 HNRNPUL1 chr19 41812943 PDXDC1 chr16 15123892 Exonic hg19 NA AI933296 Out-of-frame Inter-chr q13.2 p13.11 124046 ChimerSeq ChiTaRs ChiTaRs CUEDC1-CUEDC1 CUEDC1 chr17 55940420 CUEDC1 chr17 55940422 Exonic hg19 NA BF684426 Out-of-frame Intra-chr q22 q22 124047 ChimerSeq ChiTaRs ChiTaRs CRYL1-RBFOX1 CRYL1 chr13 21086541 RBFOX1 chr16 7198669 Exonic hg19 NA T05216 Out-of-frame Inter-chr q12.11 p13.3 124048 ChimerSeq ChiTaRs ChiTaRs SPTB-DLAT SPTB chr14 65319074 DLAT chr11 111896173 Exonic hg19 NA AI022776 Out-of-frame Inter-chr q23.3 q23.1 124049 ChimerSeq ChiTaRs ChiTaRs SEC23A-OSER1 SEC23A chr14 39572314 OSER1 chr20 42826157 Exonic hg19 NA BQ647036 Out-of-frame Inter-chr q21.1 q13.12 124050 ChimerSeq ChiTaRs ChiTaRs DNAJC5-DNAJC5 DNAJC5 chr20 62534626 DNAJC5 chr20 62528912 Exonic hg19 NA AW850806 Out-of-frame Intra-chr q13.33 q13.33 124051 ChimerSeq ChiTaRs ChiTaRs LOC284276-GLE1 LOC284276 chr18 74283136 GLE1 chr9 131271149 Exonic hg19 NA DB025846 Out-of-frame Inter-chr q34.11 124052 ChimerSeq ChiTaRs ChiTaRs DAZAP1-FKBP8 DAZAP1 chr19 1407802 FKBP8 chr19 18649132 Exonic hg19 NA BQ717786 Out-of-frame Intra-chr p13.3 p13.11 124053 ChimerSeq ChiTaRs ChiTaRs GRN-ST6GAL1 GRN chr17 42430470 ST6GAL1 chr3 186760969 Exonic hg19 NA AA705426 3'UTR-CDS Inter-chr q21.31 q27.3 124054 ChimerSeq ChiTaRs ChiTaRs CSTB-CSTB CSTB chr21 45194579 CSTB chr21 45193831 Exonic hg19 NA AW265426 Out-of-frame Intra-chr q22.3 q22.3 124055 ChimerSeq ChiTaRs ChiTaRs MBNL2-MBNL2 MBNL2 chr13 98006253 MBNL2 chr13 98006220 Exonic hg19 NA AA225376 Out-of-frame Intra-chr q32.1 Transcription factor q32.1 Transcription factor 124056 ChimerSeq ChiTaRs ChiTaRs TIMP2-TIMP2 TIMP2 chr17 76850803 TIMP2 chr17 76849938 Exonic hg19 NA BF082446 Out-of-frame Intra-chr q25.3 q25.3 124057 ChimerSeq ChiTaRs ChiTaRs YWHAB-YWHAB YWHAB chr20 43535071 YWHAB chr20 43530285 Exonic hg19 NA CN276496 Out-of-frame Intra-chr q13.12 q13.12 124058 ChimerSeq ChiTaRs ChiTaRs AARS-ABR AARS chr16 70296291 ABR chr17 998996 Exonic hg19 NA BF772216 Out-of-frame Inter-chr q22.1 p13.3 124059 ChimerSeq ChiTaRs ChiTaRs CARD8-EXD3 CARD8 chr19 48759062 EXD3 chr9 140245490 Exonic hg19 NA DA917896 Out-of-frame Inter-chr q13.33 q34.3 124060 ChimerSeq ChiTaRs ChiTaRs TGFB3-THEM4 TGFB3 chr14 76434640 THEM4 chr1 151867432 Exonic hg19 NA AV709436 Out-of-frame Inter-chr q24.3 q21.3 124061 ChimerSeq ChiTaRs ChiTaRs EIF1AD-EIF1AD EIF1AD chr11 65764215 EIF1AD chr11 65765477 Exonic hg19 NA BF515226 Out-of-frame Intra-chr q13.1 q13.1 124062 ChimerSeq ChiTaRs ChiTaRs UBE2Z-UBE2Z UBE2Z chr17 46998338 UBE2Z chr17 46998750 Exonic hg19 NA CV350036 Out-of-frame Intra-chr q21.32 q21.32 124063 ChimerSeq ChiTaRs ChiTaRs SH3GL1-ARGLU1 SH3GL1 chr19 4365608 ARGLU1 chr13 107210297 Exonic hg19 NA BF757126 Out-of-frame Inter-chr p13.3 q33.3 124064 ChimerSeq ChiTaRs ChiTaRs ISLR2-FRMPD4 ISLR2 chr15 74427135 FRMPD4 chrX 12669899 Exonic hg19 NA BM174926 Out-of-frame Inter-chr q24.1 p22.2 124065 ChimerSeq ChiTaRs ChiTaRs TXNL4B-ALB TXNL4B chr16 72094903 ALB chr4 74285996 Exonic hg19 NA DQ145726 Out-of-frame Inter-chr q22.2 q13.3 124066 ChimerSeq ChiTaRs ChiTaRs WSB1-RECK WSB1 chr17 25622296 RECK chr9 36083488 Exonic hg19 NA AI472026 Out-of-frame Inter-chr q11.1 p13.3 Tumor suppressor gene 124067 ChimerSeq ChiTaRs ChiTaRs PABPC1L-LUM PABPC1L chr20 43571067 LUM chr12 91502645 Exonic hg19 NA AW590716 Out-of-frame Inter-chr q13.12 q21.33 124068 ChimerSeq ChiTaRs ChiTaRs TUG1-MGAT5 TUG1 chr22 31372180 MGAT5 chr2 135156085 Exonic hg19 NA AF088006 Out-of-frame Inter-chr q12.2 q21.2 124069 ChimerSeq ChiTaRs ChiTaRs PITPNC1-PITPNC1 PITPNC1 chr17 65387268 PITPNC1 chr17 65387282 Exonic hg19 NA BE159536 Out-of-frame Intra-chr q24.2 q24.2 124070 ChimerSeq ChiTaRs ChiTaRs RBFOX1-SPG20 RBFOX1 chr16 6708213 SPG20 chr13 36909879 Exonic hg19 NA DA388806 Out-of-frame Inter-chr p13.3 q13.3 124071 ChimerSeq ChiTaRs ChiTaRs PNN-SLTM PNN chr14 39649909 SLTM chr15 59182468 Exonic hg19 NA BE933906 Out-of-frame Inter-chr q21.1 Tumor suppressor gene q22.1 124072 ChimerSeq ChiTaRs ChiTaRs KRT4-KRT4 KRT4 chr12 53200681 KRT4 chr12 53200335 Exonic hg19 NA AW440166 Out-of-frame Intra-chr q13.13 q13.13 124073 ChimerSeq ChiTaRs ChiTaRs FSTL3-FSTL3 FSTL3 chr19 681969 FSTL3 chr19 681973 Exonic hg19 NA BF848346 Out-of-frame Intra-chr p13.3 p13.3 124074 ChimerSeq ChiTaRs ChiTaRs TUBA1B-CNOT7 TUBA1B chr12 49521699 CNOT7 chr8 17087282 Exonic hg19 NA DB368876 Out-of-frame Inter-chr q13.12 p22 124075 ChimerSeq ChiTaRs ChiTaRs CARKD-STT3A CARKD chr13 111290534 STT3A chr11 125474095 Exonic hg19 NA AW366596 Out-of-frame Inter-chr q24.2 124076 ChimerSeq ChiTaRs ChiTaRs CALML4-GAPDH CALML4 chr15 68490023 GAPDH chr12 6647483 Exonic hg19 NA BQ420306 Out-of-frame Inter-chr q23 p13.31 124077 ChimerSeq ChiTaRs ChiTaRs C15orf39-LOC400946 C15orf39 chr15 75503862 LOC400946 chr2 20069636 Exonic hg19 NA AF495726 Out-of-frame Inter-chr q24.2 124078 ChimerSeq ChiTaRs ChiTaRs MAPK8IP3-ANTXR1 MAPK8IP3 chr16 1817680 ANTXR1 chr2 69350190 Exonic hg19 NA BE842906 Out-of-frame Inter-chr p13.3 p13.3 124079 ChimerSeq ChiTaRs ChiTaRs SPECC1-CDC27 SPECC1 chr17 20216167 CDC27 chr17 45251582 Exonic hg19 NA BF904626 Out-of-frame Intra-chr p11.2 q21.32 124080 ChimerSeq ChiTaRs ChiTaRs LEMD3-PPP6C LEMD3 chr12 65640157 PPP6C chr9 127908963 Exonic hg19 NA BE173646 Out-of-frame Inter-chr q14.3 q33.3 124081 ChimerSeq ChiTaRs ChiTaRs UBE2G1-UBE2G1 UBE2G1 chr17 4172968 UBE2G1 chr17 4172933 Exonic hg19 NA AA747626 Out-of-frame Intra-chr p13.2 p13.2 124082 ChimerSeq ChiTaRs ChiTaRs RSL1D1-RSL1D1 RSL1D1 chr16 11940395 RSL1D1 chr16 11933681 Exonic hg19 NA CB410586 Out-of-frame Intra-chr p13.13 p13.13 124083 ChimerSeq ChiTaRs ChiTaRs CNOT1-CNOT1 CNOT1 chr16 58651042 CNOT1 chr16 58649470 Exonic hg19 NA AW835606 Out-of-frame Intra-chr q21 q21 124084 ChimerSeq ChiTaRs ChiTaRs PRKRIR-PRKRIR PRKRIR chr11 76072565 PRKRIR chr11 76072078 Exonic hg19 NA D78836 Out-of-frame Intra-chr 124085 ChimerSeq ChiTaRs ChiTaRs PACSIN2-CEACAM5 PACSIN2 chr22 43267006 CEACAM5 chr19 42219103 Exonic hg19 NA CA432846 Out-of-frame Inter-chr q13.2 q13.2 124086 ChimerSeq ChiTaRs ChiTaRs DOT1L-COL6A1 DOT1L chr19 2220134 COL6A1 chr21 47420031 Exonic hg19 NA BF847846 Out-of-frame Inter-chr p13.3 Oncogene Transcription factor q22.3 124087 ChimerSeq ChiTaRs ChiTaRs RPL18-FAM134C RPL18 chr19 49118691 FAM134C chr17 40734722 Exonic hg19 NA AI699466 Out-of-frame Inter-chr q13.33 124088 ChimerSeq ChiTaRs ChiTaRs ITGB3-FMN1 ITGB3 chr17 45390031 FMN1 chr15 33062085 Exonic hg19 NA BC015906 Out-of-frame Inter-chr q21.32 Oncogene Tumor suppressor gene 124089 ChimerSeq ChiTaRs ChiTaRs PSG6-ADAR PSG6 chr19 43698720 ADAR chr1 154571180 Exonic hg19 NA BE930876 Out-of-frame Inter-chr q13.31 q21.3 124090 ChimerSeq ChiTaRs ChiTaRs AKAP10-AKAP10 AKAP10 chr17 19827754 AKAP10 chr17 19809174 Exonic hg19 NA BE930056 Out-of-frame Intra-chr p11.2 p11.2 124091 ChimerSeq ChiTaRs ChiTaRs PDK2-PDK2 PDK2 chr17 48188421 PDK2 chr17 48188023 Exonic hg19 NA BU607786 Out-of-frame Intra-chr q21.33 q21.33 124092 ChimerSeq ChiTaRs ChiTaRs IGHMBP2-NSL1 IGHMBP2 chr11 68678938 NSL1 chr1 212903958 Exonic hg19 NA AW881166 Out-of-frame Inter-chr q13.3 q32.3 124093 ChimerSeq ChiTaRs ChiTaRs GPRC5A-XRN2 GPRC5A chr12 13066593 XRN2 chr20 21322504 Exonic hg19 NA AI917076 Out-of-frame Inter-chr p13.1 Tumor suppressor gene p11.22 124094 ChimerSeq ChiTaRs ChiTaRs TSKU-TSKU TSKU chr11 76509184 TSKU chr11 76508808 Exonic hg19 NA AA506906 Out-of-frame Intra-chr q13.5 q13.5 124095 ChimerSeq ChiTaRs ChiTaRs CCND2-CCND2 CCND2 chr12 4410724 CCND2 chr12 4411418 Exonic hg19 NA BU740506 Out-of-frame Intra-chr p13.32 Oncogene p13.32 Oncogene 124096 ChimerSeq ChiTaRs ChiTaRs RANGAP1-GRID2 RANGAP1 chr22 41642676 GRID2 chr4 94557598 Exonic hg19 NA BI042006 Out-of-frame Inter-chr q13.2 q22.1 124097 ChimerSeq ChiTaRs ChiTaRs CPSF6-CPSF6 CPSF6 chr12 69664946 CPSF6 chr12 69664263 Exonic hg19 NA BG222116 Out-of-frame Intra-chr q15 q15 124098 ChimerSeq ChiTaRs ChiTaRs TBC1D15-TBC1D15 TBC1D15 chr12 72234303 TBC1D15 chr12 72233828 Exonic hg19 NA BF906286 Out-of-frame Intra-chr q21.1 q21.1 124099 ChimerSeq ChiTaRs ChiTaRs SIK3-SFMBT2 SIK3 chr11 116900792 SFMBT2 chr10 7391745 Exonic hg19 NA W28136 Out-of-frame Inter-chr q23.3 p14 124100 ChimerSeq ChiTaRs ChiTaRs DYNC1LI2-DYNC1LI2 DYNC1LI2 chr16 66755778 DYNC1LI2 chr16 66755236 Exonic hg19 NA CB853306 Out-of-frame Intra-chr q22.1 q22.1 124101 ChimerSeq ChiTaRs ChiTaRs TBC1D22A-PRG3 TBC1D22A chr22 47404646 PRG3 chr11 57147102 Exonic hg19 NA BI023286 Out-of-frame Inter-chr q13.31 q12.1 124102 ChimerSeq ChiTaRs ChiTaRs TNRC6A-RPA1 TNRC6A chr16 24814135 RPA1 chr17 1782634 Exonic hg19 NA BE175576 Out-of-frame Inter-chr p12.1 p13.3 Tumor suppressor gene 124103 ChimerSeq ChiTaRs ChiTaRs SERPINB13-GNB4 SERPINB13 chr18 61264663 GNB4 chr3 179134740 Exonic hg19 NA BE155686 Out-of-frame Inter-chr q21.33 q26.33 124104 ChimerSeq ChiTaRs ChiTaRs HERC1-CLIC4 HERC1 chr15 63933345 CLIC4 chr1 25071938 Exonic hg19 NA DA405736 Out-of-frame Inter-chr q22.31 p36.11 124105 ChimerSeq ChiTaRs ChiTaRs C14orf37-ENTPD4 C14orf37 chr14 58686526 ENTPD4 chr8 23267941 Exonic hg19 NA BF084356 Out-of-frame Inter-chr q23.1 p21.3 124106 ChimerSeq ChiTaRs ChiTaRs APP-MALAT1 APP chr21 27253868 MALAT1 chr11 65266515 Exonic hg19 NA BP198916 Out-of-frame Inter-chr q21.3 q13.1 124107 ChimerSeq ChiTaRs ChiTaRs SUMO3-SUMO3 SUMO3 chr21 46226132 SUMO3 chr21 46225591 Exonic hg19 NA W52396 Out-of-frame Intra-chr q22.3 q22.3 124108 ChimerSeq ChiTaRs ChiTaRs PCDH9-CNOT2 PCDH9 chr13 67749456 CNOT2 chr12 70677266 Exonic hg19 NA BC008476 Out-of-frame Inter-chr q21.32 Tumor suppressor gene q15 124109 ChimerSeq ChiTaRs ChiTaRs PSMC5-PNPO PSMC5 chr17 61908877 PNPO chr17 46026318 Exonic hg19 NA AB209036 Out-of-frame Intra-chr q23.3 q21.32 124110 ChimerSeq ChiTaRs ChiTaRs DIP2B-LRRC59 DIP2B chr12 50924529 LRRC59 chr17 48469053 Exonic hg19 NA BF336736 Out-of-frame Inter-chr q13.12 q21.33 124111 ChimerSeq ChiTaRs ChiTaRs OAZ1-ULK2 OAZ1 chr19 2269743 ULK2 chr17 19679525 Exonic hg19 NA AK098316 CDS-3'UTR Inter-chr p13.3 p11.2 Other:ULK 124112 ChimerSeq ChiTaRs ChiTaRs SLC5A2-SLC5A2 SLC5A2 chr16 31500053 SLC5A2 chr16 31497545 Exonic hg19 NA BI517676 Out-of-frame Intra-chr p11.2 p11.2 124113 ChimerSeq ChiTaRs ChiTaRs TBCD-SGCD TBCD chr17 80879419 SGCD chr5 156077901 Exonic hg19 NA BF931286 Out-of-frame Inter-chr q33.2 124114 ChimerSeq ChiTaRs ChiTaRs SYN3-ZBTB24 SYN3 chr22 33258806 ZBTB24 chr6 109802624 Exonic hg19 NA BQ344906 Out-of-frame Inter-chr q12.3 q21 Transcription factor 124115 ChimerSeq ChiTaRs ChiTaRs BCAS3-GOLPH3L BCAS3 chr17 59421113 GOLPH3L chr1 150650494 Exonic hg19 NA BG956566 Out-of-frame Inter-chr q23.2 q21.3 124116 ChimerSeq ChiTaRs ChiTaRs PSMD11-CTNND1 PSMD11 chr17 30777432 CTNND1 chr11 57536507 Exonic hg19 NA AW835516 Out-of-frame Inter-chr q11.2 q12.1 Tumor suppressor gene 124117 ChimerSeq ChiTaRs ChiTaRs PIK3R5-INPP5D PIK3R5 chr17 8864167 INPP5D chr2 234105025 Exonic hg19 NA BF849586 Out-of-frame Inter-chr p13.1 124118 ChimerSeq ChiTaRs ChiTaRs RPL4-KRT222 RPL4 chr15 66794428 KRT222 chr17 38811870 Exonic hg19 NA AV754796 Out-of-frame Inter-chr q22.31 q21.2 124119 ChimerSeq ChiTaRs ChiTaRs MALAT1-RPS6 MALAT1 chr11 65266860 RPS6 chr9 19378726 Exonic hg19 NA BF815926 Out-of-frame Inter-chr q13.1 p22.1 124120 ChimerSeq ChiTaRs ChiTaRs ADAP2-ADAP2 ADAP2 chr17 29286199 ADAP2 chr17 29248965 Exonic hg19 NA DA646406 Out-of-frame Intra-chr q11.2 q11.2 124121 ChimerSeq ChiTaRs ChiTaRs NAV3-NAV3 NAV3 chr12 78515524 NAV3 chr12 78515010 Exonic hg19 NA AW898446 Out-of-frame Intra-chr q21.2 q21.2 124122 ChimerSeq ChiTaRs ChiTaRs SENP1-SPDYA SENP1 chr12 48499845 SPDYA chr2 29041912 Exonic hg19 NA BI462236 Out-of-frame Inter-chr q13.11 p23.2 124123 ChimerSeq ChiTaRs ChiTaRs WARS-WARS WARS chr14 100801004 WARS chr14 100800860 Exonic hg19 NA AW796806 Out-of-frame Intra-chr q32.2 q32.2 124124 ChimerSeq ChiTaRs ChiTaRs C14orf37-TAGLN2 C14orf37 chr14 58701520 TAGLN2 chr1 159888131 Exonic hg19 NA AI859366 Out-of-frame Inter-chr q23.1 q23.2 124125 ChimerSeq ChiTaRs ChiTaRs COPS2-COPS2 COPS2 chr15 49419925 COPS2 chr15 49419556 Exonic hg19 NA BM721536 Out-of-frame Intra-chr q21.1 Tumor suppressor gene q21.1 Tumor suppressor gene 124126 ChimerSeq ChiTaRs ChiTaRs ANKFN1-SYBU ANKFN1 chr17 54259959 SYBU chr8 110586879 Exonic hg19 NA T06066 Out-of-frame Inter-chr q22 q23.2 124127 ChimerSeq ChiTaRs ChiTaRs SP2-SP2 SP2 chr17 45994496 SP2 chr17 45992675 Exonic hg19 NA BE162526 Out-of-frame Intra-chr q21.32 Transcription factor q21.32 Transcription factor 124128 ChimerSeq ChiTaRs ChiTaRs DPP8-MOGAT2 DPP8 chr15 65801624 MOGAT2 chr11 75439181 Exonic hg19 NA AW810166 Out-of-frame Inter-chr q22.31 q13.5 124129 ChimerSeq ChiTaRs ChiTaRs ZNF20-ZNF20 ZNF20 chr19 12253775 ZNF20 chr19 12252621 Exonic hg19 NA AX721266 Out-of-frame Intra-chr p13.2 Transcription factor p13.2 Transcription factor 124130 ChimerSeq ChiTaRs ChiTaRs MLL2-MLLT10 MLL2 chr12 49443557 MLLT10 chr10 21940694 Exonic hg19 NA AW379456 Out-of-frame Inter-chr p12.31 Oncogene 124131 ChimerSeq ChiTaRs ChiTaRs CYLD-PAPD5 CYLD chr16 50776752 PAPD5 chr16 50249976 Exonic hg19 NA DA414506 5'UTR-CDS Intra-chr q12.1 Oncogene Tumor suppressor gene q12.1 124132 ChimerSeq ChiTaRs ChiTaRs CPNE2-SORT1 CPNE2 chr16 57178541 SORT1 chr1 109853100 Exonic hg19 NA BE831726 Out-of-frame Inter-chr q13 p13.3 124133 ChimerSeq ChiTaRs ChiTaRs GPCPD1-FSTL1 GPCPD1 chr20 5543057 FSTL1 chr3 120113901 Exonic hg19 NA AW889516 Out-of-frame Inter-chr p12.3 q13.33 124134 ChimerSeq ChiTaRs ChiTaRs C21orf67-SCAF1 C21orf67 chr21 46356869 SCAF1 chr19 50161828 Exonic hg19 NA AW291226 Out-of-frame Inter-chr q13.33 124135 ChimerSeq ChiTaRs ChiTaRs DAZAP2-DAZAP2 DAZAP2 chr12 51636964 DAZAP2 chr12 51632618 Exonic hg19 NA W22826 Out-of-frame Intra-chr q13.13 q13.13 124136 ChimerSeq ChiTaRs ChiTaRs DRAM1-DRAM1 DRAM1 chr12 102301246 DRAM1 chr12 102291242 Exonic hg19 NA AF461896 Out-of-frame Intra-chr q23.2 q23.2 124137 ChimerSeq ChiTaRs ChiTaRs KPNB1-LSM4 KPNB1 chr17 45761004 LSM4 chr19 18417875 Exonic hg19 NA AI110736 3'UTR-3'UTR Inter-chr q21.32 p13.11 124138 ChimerSeq ChiTaRs ChiTaRs DLEU2-ATP5J2-PTCD1 DLEU2 chr13 50662817 ATP5J2-PTCD1 chr7 99055814 Exonic hg19 NA AA639666 Out-of-frame Inter-chr q14.2 Tumor suppressor gene q22.1 124139 ChimerSeq ChiTaRs ChiTaRs ERP29-SLC6A14 ERP29 chr12 112460794 SLC6A14 chrX 115577914 Exonic hg19 NA CA312866 Out-of-frame Inter-chr q24.13 q23 124140 ChimerSeq ChiTaRs ChiTaRs MPHOSPH8-MPHOSPH8 MPHOSPH8 chr13 20246656 MPHOSPH8 chr13 20246689 Exonic hg19 NA BM674866 Out-of-frame Intra-chr q12.11 q12.11 124141 ChimerSeq ChiTaRs ChiTaRs RNF10-SLC28A1 RNF10 chr12 120995485 SLC28A1 chr15 85427909 Exonic hg19 NA U62966 CDS-5'UTR Inter-chr q24.31 q25.3 124142 ChimerSeq ChiTaRs ChiTaRs MBP-MPO MBP chr18 74726241 MPO chr17 56350926 Exonic hg19 NA BF900196 Out-of-frame Inter-chr q23 q22 124143 ChimerSeq ChiTaRs ChiTaRs KHSRP-IGFBP5 KHSRP chr19 6414351 IGFBP5 chr2 217541404 Exonic hg19 NA AA628946 Out-of-frame Inter-chr p13.3 q35 Tumor suppressor gene 124144 ChimerSeq ChiTaRs ChiTaRs TOX3-LRP6 TOX3 chr16 52553439 LRP6 chr12 12401020 Exonic hg19 NA BE067646 Out-of-frame Inter-chr q12.1 124145 ChimerSeq ChiTaRs ChiTaRs DSTN-DSTN DSTN chr20 17588129 DSTN chr20 17588124 Exonic hg19 NA CN411146 Out-of-frame Intra-chr p12.1 p12.1 124146 ChimerSeq ChiTaRs ChiTaRs CDH1-CDH1 CDH1 chr16 68868970 CDH1 chr16 68868571 Exonic hg19 NA AW843356 Out-of-frame Intra-chr q22.1 Oncogene Tumor suppressor gene q22.1 Oncogene Tumor suppressor gene 124147 ChimerSeq ChiTaRs ChiTaRs CD37-MIR29B2 CD37 chr19 49843859 MIR29B2 chr1 207986922 Exonic hg19 NA DB333096 Out-of-frame Inter-chr q13.33 q32.2 124148 ChimerSeq ChiTaRs ChiTaRs DSG2-DSG2 DSG2 chr18 29127913 DSG2 chr18 29127945 Exonic hg19 NA AW600916 Out-of-frame Intra-chr q12.1 q12.1 124149 ChimerSeq ChiTaRs ChiTaRs VAMP2-TNC VAMP2 chr17 8064706 TNC chr9 117838780 Exonic hg19 NA BE771726 Out-of-frame Inter-chr p13.1 q33.1 124150 ChimerSeq ChiTaRs ChiTaRs CES2-CES2 CES2 chr16 66978999 CES2 chr16 66977905 Exonic hg19 NA CN478636 Out-of-frame Intra-chr q22.1 q22.1 124151 ChimerSeq ChiTaRs ChiTaRs ELP2-MAP1A ELP2 chr18 33718490 MAP1A chr15 43818199 Exonic hg19 NA BE700126 Out-of-frame Inter-chr q12.2 q15.3 124152 ChimerSeq ChiTaRs ChiTaRs SMG6-ITFG2 SMG6 chr17 2115998 ITFG2 chr12 2933402 Exonic hg19 NA BE837736 Out-of-frame Inter-chr p13.3 p13.33 124153 ChimerSeq ChiTaRs ChiTaRs SNRPD2-VCP SNRPD2 chr19 46195195 VCP chr9 35061082 Exonic hg19 NA BE336906 Out-of-frame Inter-chr q13.32 p13.3 124154 ChimerSeq ChiTaRs ChiTaRs UBC-UBC UBC chr12 125397961 UBC chr12 125396192 Exonic hg19 NA BG924526 Out-of-frame Intra-chr q24.31 q24.31 124155 ChimerSeq ChiTaRs ChiTaRs PTBP1-MALAT1 PTBP1 chr19 811297 MALAT1 chr11 65267716 Exonic hg19 NA AI005156 Out-of-frame Inter-chr p13.3 q13.1 124156 ChimerSeq ChiTaRs ChiTaRs VPS35-VPS35 VPS35 chr16 46706276 VPS35 chr16 46696231 Exonic hg19 NA BQ225946 Out-of-frame Intra-chr q11.2 q11.2 124157 ChimerSeq ChiTaRs ChiTaRs SAP30BP-BEAN1 SAP30BP chr17 73663495 BEAN1 chr16 66526834 Exonic hg19 NA CD624676 Out-of-frame Inter-chr q25.1 q21 124158 ChimerSeq ChiTaRs ChiTaRs RECQL5-RECQL5 RECQL5 chr17 73658858 RECQL5 chr17 73625833 Exonic hg19 NA BQ316256 Out-of-frame Intra-chr q25.1 q25.1 124159 ChimerSeq ChiTaRs ChiTaRs PIM3-PIM3 PIM3 chr22 50357199 PIM3 chr22 50354843 Exonic hg19 NA BU180116 Out-of-frame Intra-chr q13.33 CAMK:PIM q13.33 CAMK:PIM 124160 ChimerSeq ChiTaRs ChiTaRs NR1H2-NR1H2 NR1H2 chr19 50886239 NR1H2 chr19 50885265 Exonic hg19 NA BM989946 Out-of-frame Intra-chr q13.33 Transcription factor q13.33 Transcription factor 124161 ChimerSeq ChiTaRs ChiTaRs CRYL1-ATRNL1 CRYL1 chr13 20978377 ATRNL1 chr10 117503329 Exonic hg19 NA BE069946 Out-of-frame Inter-chr q12.11 q25.3 124162 ChimerSeq ChiTaRs ChiTaRs DDX27-DDX27 DDX27 chr20 47843072 DDX27 chr20 47849887 Exonic hg19 NA BF798616 Out-of-frame Intra-chr q13.13 q13.13 124163 ChimerSeq ChiTaRs ChiTaRs RTN3-TCERG1 RTN3 chr11 63527205 TCERG1 chr5 145882945 Exonic hg19 NA AA099776 Out-of-frame Inter-chr q13.1 q32 124164 ChimerSeq ChiTaRs ChiTaRs RPUSD1-ITGB4 RPUSD1 chr16 836326 ITGB4 chr17 73750719 Exonic hg19 NA BF798086 Out-of-frame Inter-chr p13.3 q25.1 124165 ChimerSeq ChiTaRs ChiTaRs MORC3-MORC3 MORC3 chr21 37713724 MORC3 chr21 37711073 Exonic hg19 NA AU185866 Out-of-frame Intra-chr q22.12 q22.12 124166 ChimerSeq ChiTaRs ChiTaRs PKIG-PKIG PKIG chr20 43246030 PKIG chr20 43245767 Exonic hg19 NA AA603416 Out-of-frame Intra-chr q13.12 q13.12 124167 ChimerSeq ChiTaRs ChiTaRs LGMN-LGMN LGMN chr14 93185212 LGMN chr14 93182289 Exonic hg19 NA AW753026 Out-of-frame Intra-chr q32.12 q32.12 124168 ChimerSeq ChiTaRs ChiTaRs PSENEN-NDRG1 PSENEN chr19 36237902 NDRG1 chr8 134249421 Exonic hg19 NA EC471676 Out-of-frame Inter-chr q13.12 q24.22 Tumor suppressor gene 124169 ChimerSeq ChiTaRs ChiTaRs VPS18-VPS18 VPS18 chr15 41192694 VPS18 chr15 41192676 Exonic hg19 NA BU155386 Out-of-frame Intra-chr q15.1 q15.1 124170 ChimerSeq ChiTaRs ChiTaRs MORN3-UNC5D MORN3 chr12 122094214 UNC5D chr8 35350794 Exonic hg19 NA BF335516 Out-of-frame Inter-chr q24.31 p12 Tumor suppressor gene 124171 ChimerSeq ChiTaRs ChiTaRs RANBP1-MINK1 RANBP1 chr22 20105147 MINK1 chr17 4801130 Exonic hg19 NA BU536386 Out-of-frame Inter-chr q11.21 p13.2 124172 ChimerSeq ChiTaRs ChiTaRs PMP22-THBS2 PMP22 chr17 15134132 THBS2 chr6 169616280 Exonic hg19 NA AW580806 Out-of-frame Inter-chr p12 q27 124173 ChimerSeq ChiTaRs ChiTaRs FER1L4-ADAM12 FER1L4 chr20 34170368 ADAM12 chr10 127781266 Exonic hg19 NA BF993676 Out-of-frame Inter-chr q11.22 Tumor suppressor gene q26.2 124174 ChimerSeq ChiTaRs ChiTaRs CFL1-CFL1 CFL1 chr11 65623562 CFL1 chr11 65622890 Exonic hg19 NA BI006566 Out-of-frame Intra-chr q13.1 q13.1 124175 ChimerSeq ChiTaRs ChiTaRs CSE1L-CSE1L CSE1L chr20 47711357 CSE1L chr20 47711382 Exonic hg19 NA BU579546 Out-of-frame Intra-chr q13.13 q13.13 124176 ChimerSeq ChiTaRs ChiTaRs BRD1-BRD1 BRD1 chr22 50169339 BRD1 chr22 50169353 Exonic hg19 NA AA116016 Out-of-frame Intra-chr q13.33 q13.33 124177 ChimerSeq ChiTaRs ChiTaRs SAFB-KIF13B SAFB chr19 5667464 KIF13B chr8 29088956 Exonic hg19 NA BF513396 Out-of-frame Inter-chr p13.3 Tumor suppressor gene Transcription factor p12 124178 ChimerSeq ChiTaRs ChiTaRs BAZ2A-ERGIC3 BAZ2A chr12 56993542 ERGIC3 chr20 34130412 Exonic hg19 NA AW380796 Out-of-frame Inter-chr q13.3 Transcription factor q11.22 124179 ChimerSeq ChiTaRs ChiTaRs RHBDD3-RHBDD3 RHBDD3 chr22 29663443 RHBDD3 chr22 29659574 Exonic hg19 NA BF913686 Out-of-frame Intra-chr q12.2 q12.2 124180 ChimerSeq ChiTaRs ChiTaRs FARP1-RERE FARP1 chr13 98916302 RERE chr1 8722944 Exonic hg19 NA BE065916 Out-of-frame Inter-chr q32.2 p36.23 124181 ChimerSeq ChiTaRs ChiTaRs SNX6-ZC3H13 SNX6 chr14 35037953 ZC3H13 chr13 46577292 Exonic hg19 NA BQ028676 Out-of-frame Inter-chr q13.1 q14.13 124182 ChimerSeq ChiTaRs ChiTaRs GPR133-PHLPP1 GPR133 chr12 131476438 PHLPP1 chr18 60564928 Exonic hg19 NA BE929976 Out-of-frame Inter-chr q21.33 Tumor suppressor gene 124183 ChimerSeq ChiTaRs ChiTaRs ERCC1-CTPS2 ERCC1 chr19 45978305 CTPS2 chrX 16684855 Exonic hg19 NA BE826026 Out-of-frame Inter-chr q13.32 Oncogene p22.2 124184 ChimerSeq ChiTaRs ChiTaRs MRP63-RPL13 MRP63 chr13 21751651 RPL13 chr16 89627104 Exonic hg19 NA BC080536 Out-of-frame Inter-chr q24.3 124185 ChimerSeq ChiTaRs ChiTaRs PHLDA1-GSN PHLDA1 chr12 76423792 GSN chr9 124089677 Exonic hg19 NA BF149146 Out-of-frame Inter-chr q21.2 q33.2 Tumor suppressor gene 124186 ChimerSeq ChiTaRs ChiTaRs STARD13-TSR2 STARD13 chr13 34112999 TSR2 chrX 54471626 Exonic hg19 NA AL711716 Out-of-frame Inter-chr q13.1 Tumor suppressor gene p11.22 124187 ChimerSeq ChiTaRs ChiTaRs SNX6-TCF3 SNX6 chr14 35038343 TCF3 chr19 1609291 Exonic hg19 NA BC009346 Out-of-frame Inter-chr q13.1 p13.3 Oncogene Tumor suppressor gene Transcription factor 124188 ChimerSeq ChiTaRs ChiTaRs CALCOCO1-TK1 CALCOCO1 chr12 54105313 TK1 chr17 76176597 Exonic hg19 NA AW376086 Out-of-frame Inter-chr q13.13 q25.3 124189 ChimerSeq ChiTaRs ChiTaRs TRBV20-1-SERPINF1 TRBV20-1 chr16 2011976 SERPINF1 chr17 1674386 Exonic hg19 NA N36796 Out-of-frame Inter-chr 124190 ChimerSeq ChiTaRs ChiTaRs SNN-TSPAN14 SNN chr16 11773083 TSPAN14 chr10 82278233 Exonic hg19 NA AI982566 Out-of-frame Inter-chr p13.13 q23.1 124191 ChimerSeq ChiTaRs ChiTaRs TTC3-TTC3 TTC3 chr21 38538042 TTC3 chr21 38529155 Exonic hg19 NA CN350086 Out-of-frame Intra-chr q22.13 q22.13 124192 ChimerSeq ChiTaRs ChiTaRs MAML2-MYO5A MAML2 chr11 95961389 MYO5A chr15 52603214 Exonic hg19 NA AW895156 Out-of-frame Inter-chr q21 Oncogene q21.2 124193 ChimerSeq ChiTaRs ChiTaRs CALM3-CALM3 CALM3 chr19 47113824 CALM3 chr19 47112612 Exonic hg19 NA AK124456 Out-of-frame Intra-chr q13.32 q13.32 124194 ChimerSeq ChiTaRs ChiTaRs IQCK-IQCK IQCK chr16 19868686 IQCK chr16 19868251 Exonic hg19 NA BU673976 Out-of-frame Intra-chr p12.3 p12.3 124195 ChimerSeq ChiTaRs ChiTaRs ADRA1D-ADRA1D ADRA1D chr20 4229089 ADRA1D chr20 4201815 Exonic hg19 NA M76446 Out-of-frame Intra-chr p13 p13 124196 ChimerSeq ChiTaRs ChiTaRs MTMR3-BRWD1 MTMR3 chr22 30304346 BRWD1 chr21 40560343 Exonic hg19 NA T05096 Out-of-frame Inter-chr q12.2 q22.2 124197 ChimerSeq ChiTaRs ChiTaRs AGBL1-AGBL1 AGBL1 chr15 86843617 AGBL1 chr15 86855420 Exonic hg19 NA CB857866 Out-of-frame Intra-chr q25.3 q25.3 124198 ChimerSeq ChiTaRs ChiTaRs MAP1LC3B-BCL2L11 MAP1LC3B chr16 87437575 BCL2L11 chr2 111902354 Exonic hg19 NA BQ368756 Out-of-frame Inter-chr q24.2 q13 Tumor suppressor gene 124199 ChimerSeq ChiTaRs ChiTaRs PTPN11-PTPN11 PTPN11 chr12 112946157 PTPN11 chr12 112946134 Exonic hg19 NA AW362486 Out-of-frame Intra-chr q24.13 Oncogene Tumor suppressor gene q24.13 Oncogene Tumor suppressor gene 124200 ChimerSeq ChiTaRs ChiTaRs PCNXL3-PPM1G PCNXL3 chr11 65396155 PPM1G chr2 27604588 Exonic hg19 NA BG954376 Out-of-frame Inter-chr p23.3 124201 ChimerSeq ChiTaRs ChiTaRs CEACAM6-CAPN5 CEACAM6 chr19 42260599 CAPN5 chr11 76828675 Exonic hg19 NA BG953926 Out-of-frame Inter-chr q13.2 q13.5 124202 ChimerSeq ChiTaRs ChiTaRs ZNF175-ZNF175 ZNF175 chr19 52092070 ZNF175 chr19 52092033 Exonic hg19 NA AL043886 Out-of-frame Intra-chr q13.41 Transcription factor q13.41 Transcription factor 124203 ChimerSeq ChiTaRs ChiTaRs MBD6-MYH14 MBD6 chr12 57923765 MYH14 chr19 50808382 Exonic hg19 NA AW362436 Out-of-frame Inter-chr q13.3 Transcription factor q13.33 124204 ChimerSeq ChiTaRs ChiTaRs LOC284889-TPRKB LOC284889 chr22 24237398 TPRKB chr2 73957689 Exonic hg19 NA BF038316 Out-of-frame Inter-chr p13.1 124205 ChimerSeq ChiTaRs ChiTaRs THSD4-PTMA THSD4 chr15 72073665 PTMA chr2 232576655 Exonic hg19 NA BG249716 Out-of-frame Inter-chr q23 q37.1 124206 ChimerSeq ChiTaRs ChiTaRs FN3K-RAB14 FN3K chr17 80707351 RAB14 chr9 123944275 Exonic hg19 NA BC113976 Out-of-frame Inter-chr q25.3 q33.2 124207 ChimerSeq ChiTaRs ChiTaRs KIAA1199-KIAA1199 KIAA1199 chr15 81092839 KIAA1199 chr15 81093345 Exonic hg19 NA AW814966 Out-of-frame Intra-chr 124208 ChimerSeq ChiTaRs ChiTaRs ICAM2-ENO1 ICAM2 chr17 62097977 ENO1 chr1 8928063 Exonic hg19 NA BE267696 Out-of-frame Inter-chr q23.3 p36.23 124209 ChimerSeq ChiTaRs ChiTaRs FAM98C-FAM98C FAM98C chr19 38897957 FAM98C chr19 38899623 Exonic hg19 NA BM873666 Out-of-frame Intra-chr q13.2 q13.2 124210 ChimerSeq ChiTaRs ChiTaRs PDCD7-KHDC1 PDCD7 chr15 65410475 KHDC1 chr6 73993564 Exonic hg19 NA BM723006 Out-of-frame Inter-chr q22.31 q13 124211 ChimerSeq ChiTaRs ChiTaRs ATXN2-ATXN2 ATXN2 chr12 111893928 ATXN2 chr12 111894012 Exonic hg19 NA BF833296 Out-of-frame Intra-chr q24.12 q24.12 124212 ChimerSeq ChiTaRs ChiTaRs SLC48A1-SLC48A1 SLC48A1 chr12 48171009 SLC48A1 chr12 48171644 Exonic hg19 NA BF872886 Out-of-frame Intra-chr q13.11 q13.11 124213 ChimerSeq ChiTaRs ChiTaRs LRRIQ1-LRRIQ1 LRRIQ1 chr12 85497856 LRRIQ1 chr12 85449324 Exonic hg19 NA AV734396 Out-of-frame Intra-chr q21.31 q21.31 124214 ChimerSeq ChiTaRs ChiTaRs SSH1-C1orf50 SSH1 chr12 109176863 C1orf50 chr1 43240918 Exonic hg19 NA BF885036 Out-of-frame Inter-chr q24.11 p34.2 124215 ChimerSeq ChiTaRs ChiTaRs CLPB-HECA CLPB chr11 72053183 HECA chr6 139499229 Exonic hg19 NA BF815616 Out-of-frame Inter-chr q13.4 q24.1 Tumor suppressor gene 124216 ChimerSeq ChiTaRs ChiTaRs PPARA-PPARA PPARA chr22 46637815 PPARA chr22 46637369 Exonic hg19 NA AA807786 Out-of-frame Intra-chr q13.31 Tumor suppressor gene Transcription factor q13.31 Tumor suppressor gene Transcription factor 124217 ChimerSeq ChiTaRs ChiTaRs SPATS2-ACTN1 SPATS2 chr12 49810828 ACTN1 chr14 69362567 Exonic hg19 NA BF925646 Out-of-frame Inter-chr q13.12 q24.1 124218 ChimerSeq ChiTaRs ChiTaRs ZNF563-MICAL1 ZNF563 chr19 12444306 MICAL1 chr6 109774912 Exonic hg19 NA DB152946 Out-of-frame Inter-chr p13.2 Transcription factor q21 124219 ChimerSeq ChiTaRs ChiTaRs CALM1-ABI2 CALM1 chr14 90871164 ABI2 chr2 204234195 Exonic hg19 NA CB250526 Out-of-frame Inter-chr q32.11 q33.2 Tumor suppressor gene 124220 ChimerSeq ChiTaRs ChiTaRs SMARCB1-SMARCB1 SMARCB1 chr22 24143149 SMARCB1 chr22 24143116 Exonic hg19 NA BG390166 Out-of-frame Intra-chr q11.23 Oncogene Tumor suppressor gene q11.23 Oncogene Tumor suppressor gene 124221 ChimerSeq ChiTaRs ChiTaRs PTRF-LOC653160 PTRF chr17 40555037 LOC653160 chr1 35447900 Exonic hg19 NA BG004016 Out-of-frame Inter-chr 124222 ChimerSeq ChiTaRs ChiTaRs HOXC8-HOXC8 HOXC8 chr12 54406133 HOXC8 chr12 54405573 Exonic hg19 NA CA427346 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 Transcription factor 124223 ChimerSeq ChiTaRs ChiTaRs RPL28-RPL28 RPL28 chr19 55898013 RPL28 chr19 55898027 Exonic hg19 NA AI907286 Out-of-frame Intra-chr q13.42 q13.42 124224 ChimerSeq ChiTaRs ChiTaRs NEMF-FOXO3 NEMF chr14 50295891 FOXO3 chr6 108951529 Exonic hg19 NA BF989506 Out-of-frame Inter-chr q21.3 q21 Oncogene Tumor suppressor gene Transcription factor 124225 ChimerSeq ChiTaRs ChiTaRs ERC1-ERC1 ERC1 chr12 1603458 ERC1 chr12 1600310 Exonic hg19 NA BF381126 Out-of-frame Intra-chr 124226 ChimerSeq ChiTaRs ChiTaRs VAMP2-TAF4 VAMP2 chr17 8063924 TAF4 chr20 60551014 Exonic hg19 NA BE272026 Out-of-frame Inter-chr p13.1 124227 ChimerSeq ChiTaRs ChiTaRs UBA52-SUGP2 UBA52 chr19 18685944 SUGP2 chr19 19103413 Exonic hg19 NA BP212026 Out-of-frame Intra-chr p13.11 p13.11 124228 ChimerSeq ChiTaRs ChiTaRs EXOC7-MTDH EXOC7 chr17 74079674 MTDH chr8 98731291 Exonic hg19 NA W78806 Out-of-frame Inter-chr q25.1 q22.1 124229 ChimerSeq ChiTaRs ChiTaRs KRT5-KRT5 KRT5 chr12 52912850 KRT5 chr12 52912873 Exonic hg19 NA CV372526 Out-of-frame Intra-chr q13.13 q13.13 124230 ChimerSeq ChiTaRs ChiTaRs KLK1-EFHD2 KLK1 chr19 51322551 EFHD2 chr1 15756752 Exonic hg19 NA CB985286 Out-of-frame Inter-chr q13.33 p36.21 124231 ChimerSeq ChiTaRs ChiTaRs PSMG2-PIP4K2A PSMG2 chr18 12725566 PIP4K2A chr10 22834917 Exonic hg19 NA BG007476 Out-of-frame Inter-chr p11.21 p12.2 124232 ChimerSeq ChiTaRs ChiTaRs ATF7IP-ATF7IP ATF7IP chr12 14610222 ATF7IP chr12 14619459 Exonic hg19 NA CV391536 Out-of-frame Intra-chr p13.1 p13.1 124233 ChimerSeq ChiTaRs ChiTaRs CENPT-CENPT CENPT chr16 67867800 CENPT chr16 67866164 Exonic hg19 NA BP209496 Out-of-frame Intra-chr q22.1 Transcription factor q22.1 Transcription factor 124234 ChimerSeq ChiTaRs ChiTaRs KNOP1-CYP24A1 KNOP1 chr16 19729435 CYP24A1 chr20 52771828 Exonic hg19 NA AL711186 Out-of-frame Inter-chr p12.3 q13.2 124235 ChimerSeq ChiTaRs ChiTaRs RNF10-RNF10 RNF10 chr12 120995190 RNF10 chr12 120995175 Exonic hg19 NA AI065156 Out-of-frame Intra-chr q24.31 q24.31 124236 ChimerSeq ChiTaRs ChiTaRs PML-PML PML chr15 74325552 PML chr15 74317306 Exonic hg19 NA CF887266 Out-of-frame Intra-chr q24.1 Oncogene Tumor suppressor gene q24.1 Oncogene Tumor suppressor gene 124237 ChimerSeq ChiTaRs ChiTaRs CDC25B-CDC25B CDC25B chr20 3786409 CDC25B chr20 3786398 Exonic hg19 NA BF205766 Out-of-frame Intra-chr p13 p13 124238 ChimerSeq ChiTaRs ChiTaRs IDH3B-IDH3B IDH3B chr20 2644850 IDH3B chr20 2641517 Exonic hg19 NA DB143046 Out-of-frame Intra-chr p13 p13 124239 ChimerSeq ChiTaRs ChiTaRs OLFM4-OLFM4 OLFM4 chr13 53625651 OLFM4 chr13 53625225 Exonic hg19 NA AW934846 Out-of-frame Intra-chr q14.3 Tumor suppressor gene q14.3 Tumor suppressor gene 124240 ChimerSeq ChiTaRs ChiTaRs TLE3-HGS TLE3 chr15 70359013 HGS chr17 79662059 Exonic hg19 NA BE811386 Out-of-frame Inter-chr q23 q25.3 124241 ChimerSeq ChiTaRs ChiTaRs NANOGNB-ATXN1 NANOGNB chr12 7926718 ATXN1 chr6 16449734 Exonic hg19 NA BC036226 Out-of-frame Inter-chr p13.31 Transcription factor p22.3 124242 ChimerSeq ChiTaRs ChiTaRs GPATCH8-IRAK4 GPATCH8 chr17 42540578 IRAK4 chr12 44180882 Exonic hg19 NA CA432346 Out-of-frame Inter-chr q21.31 q12 TKL:IRAK 124243 ChimerSeq ChiTaRs ChiTaRs GAPDH-GAPDH GAPDH chr12 6643735 GAPDH chr12 6643978 Exonic hg19 NA BI003826 5'UTR-5'UTR Intra-chr p13.31 p13.31 124244 ChimerSeq ChiTaRs ChiTaRs ATP5E-ATP5E ATP5E chr20 57605452 ATP5E chr20 57605367 Exonic hg19 NA AW801206 Out-of-frame Intra-chr q13.32 q13.32 124245 ChimerSeq ChiTaRs ChiTaRs SMARCA4-MAD1L1 SMARCA4 chr19 11152133 MAD1L1 chr7 2137638 Exonic hg19 NA BF195576 Out-of-frame Inter-chr p13.2 Oncogene Tumor suppressor gene p22.3 Tumor suppressor gene 124246 ChimerSeq ChiTaRs ChiTaRs MKL1-CD9 MKL1 chr22 40948372 CD9 chr12 6314695 Exonic hg19 NA BF770206 Out-of-frame Inter-chr q13.2 p13.31 124247 ChimerSeq ChiTaRs ChiTaRs TMCO3-MPDU1 TMCO3 chr13 114193799 MPDU1 chr17 7490871 Exonic hg19 NA BF746416 Out-of-frame Inter-chr q34 p13.1 124248 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65267649 MALAT1 chr11 65266635 Exonic hg19 NA DW436856 Out-of-frame Intra-chr q13.1 q13.1 124249 ChimerSeq ChiTaRs ChiTaRs NOP56-RBPMS NOP56 chr20 2637652 RBPMS chr8 30385662 Exonic hg19 NA AV759376 Out-of-frame Inter-chr p13 p12 124250 ChimerSeq ChiTaRs ChiTaRs HSP90B1-HSP90B1 HSP90B1 chr12 104341704 HSP90B1 chr12 104341444 Exonic hg19 NA N67356 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene 124251 ChimerSeq ChiTaRs ChiTaRs COL6A1-AZIN1 COL6A1 chr21 47424015 AZIN1 chr8 103838694 Exonic hg19 NA AI890066 Out-of-frame Inter-chr q22.3 q22.3 124252 ChimerSeq ChiTaRs ChiTaRs NEUROD2-NLRP14 NEUROD2 chr17 37761142 NLRP14 chr11 7065046 Exonic hg19 NA DB315876 Out-of-frame Inter-chr q12 Transcription factor p15.4 124253 ChimerSeq ChiTaRs ChiTaRs TRIOBP-NDE1 TRIOBP chr22 38153945 NDE1 chr16 15785061 Exonic hg19 NA BM913836 Out-of-frame Inter-chr q13.1 p13.11 124254 ChimerSeq ChiTaRs ChiTaRs KDM4B-GTF2F1 KDM4B chr19 5151912 GTF2F1 chr19 6381394 Exonic hg19 NA BU738576 Out-of-frame Intra-chr p13.3 p13.3 124255 ChimerSeq ChiTaRs ChiTaRs CTSC-WWC3 CTSC chr11 88070862 WWC3 chrX 10035313 Exonic hg19 NA DA446566 Out-of-frame Inter-chr q14.2 p22.2 124256 ChimerSeq ChiTaRs ChiTaRs H1F0-NINL H1F0 chr22 38203442 NINL chr20 25433561 Exonic hg19 NA AI687456 Out-of-frame Inter-chr q13.1 p11.21 124257 ChimerSeq ChiTaRs ChiTaRs DHRS12-BCL2 DHRS12 chr13 52353930 BCL2 chr18 60854950 Exonic hg19 NA CV418406 Out-of-frame Inter-chr q14.3 q21.33 Oncogene 124258 ChimerSeq ChiTaRs ChiTaRs SLC1A5-LEPREL1 SLC1A5 chr19 47278579 LEPREL1 chr3 189675251 Exonic hg19 NA AW794426 Out-of-frame Inter-chr q13.32 124259 ChimerSeq ChiTaRs ChiTaRs ATP2A2-ATP2A2 ATP2A2 chr12 110778520 ATP2A2 chr12 110764242 Exonic hg19 NA F00066 Out-of-frame Intra-chr q24.11 q24.11 124260 ChimerSeq ChiTaRs ChiTaRs SNX29-DNAJC7 SNX29 chr16 12146443 DNAJC7 chr17 40137187 Exonic hg19 NA BE148166 Out-of-frame Inter-chr p13.13 q21.2 124261 ChimerSeq ChiTaRs ChiTaRs SYNE2-SYNE2 SYNE2 chr14 64465762 SYNE2 chr14 64476801 Exonic hg19 NA AU185086 Out-of-frame Intra-chr q23.2 q23.2 124262 ChimerSeq ChiTaRs ChiTaRs ANKRD27-ANKRD27 ANKRD27 chr19 33113445 ANKRD27 chr19 33113409 Exonic hg19 NA BE079446 Out-of-frame Intra-chr q13.11 q13.11 124263 ChimerSeq ChiTaRs ChiTaRs PTRH2-BFAR PTRH2 chr17 57774985 BFAR chr16 14742169 Exonic hg19 NA BE939206 Out-of-frame Inter-chr q23.1 124264 ChimerSeq ChiTaRs ChiTaRs TMBIM6-TMBIM6 TMBIM6 chr12 50158505 TMBIM6 chr12 50158155 Exonic hg19 NA BQ775216 Out-of-frame Intra-chr q13.12 q13.12 124265 ChimerSeq ChiTaRs ChiTaRs UNC13D-PAPPA UNC13D chr17 73823386 PAPPA chr9 119160869 Exonic hg19 NA R26106 Out-of-frame Inter-chr q25.1 q33.1 124266 ChimerSeq ChiTaRs ChiTaRs GTF2F2-SMAD9 GTF2F2 chr13 45694856 SMAD9 chr13 37453641 Exonic hg19 NA DA756136 In-Frame Intra-chr q14.12 q13.3 Transcription factor 124267 ChimerSeq ChiTaRs ChiTaRs SNUPN-ATIC SNUPN chr15 75918656 ATIC chr2 216176838 Exonic hg19 NA BC007306 Out-of-frame Inter-chr q24.2 q35 124268 ChimerSeq ChiTaRs ChiTaRs KIFC3-INSR KIFC3 chr16 57806970 INSR chr19 7227814 Exonic hg19 NA CV355096 Out-of-frame Inter-chr q21 p13.2 TK:InsR 124269 ChimerSeq ChiTaRs ChiTaRs NQO1-DYRK1A NQO1 chr16 69744922 DYRK1A chr21 38887379 Exonic hg19 NA BM983726 Out-of-frame Inter-chr q22.1 q22.13 CMGC:DYRK 124270 ChimerSeq ChiTaRs ChiTaRs FURIN-ANKRD11 FURIN chr15 91420238 ANKRD11 chr16 89348380 Exonic hg19 NA BF823726 Out-of-frame Inter-chr q26.1 q24.3 124271 ChimerSeq ChiTaRs ChiTaRs SGTA-YIPF3 SGTA chr19 2762563 YIPF3 chr6 43481152 Exonic hg19 NA BM729296 Out-of-frame Inter-chr p13.3 p21.1 124272 ChimerSeq ChiTaRs ChiTaRs PSG3-PSG6 PSG3 chr19 43233410 PSG6 chr19 43512161 Exonic hg19 NA BE928986 Out-of-frame Intra-chr q13.2 q13.31 124273 ChimerSeq ChiTaRs ChiTaRs OSBPL2-OSBPL2 OSBPL2 chr20 60860187 OSBPL2 chr20 60842270 Exonic hg19 NA CV393366 Out-of-frame Intra-chr q13.33 q13.33 124274 ChimerSeq ChiTaRs ChiTaRs UTP6-MIR205HG UTP6 chr17 30228711 MIR205HG chr1 209602184 Exonic hg19 NA BF149116 Out-of-frame Inter-chr q11.2 q32.2 124275 ChimerSeq ChiTaRs ChiTaRs UBE2V1-UBE2V1 UBE2V1 chr20 48709940 UBE2V1 chr20 48709900 Exonic hg19 NA AW807686 Out-of-frame Intra-chr q13.13 q13.13 124276 ChimerSeq ChiTaRs ChiTaRs GIT1-MAGI1 GIT1 chr17 27902868 MAGI1 chr3 65341835 Exonic hg19 NA AL110296 Out-of-frame Inter-chr q11.2 Oncogene 124277 ChimerSeq ChiTaRs ChiTaRs CHST11-CHST11 CHST11 chr12 104894114 CHST11 chr12 104894893 Exonic hg19 NA BF508216 Out-of-frame Intra-chr q23.3 q23.3 124278 ChimerSeq ChiTaRs ChiTaRs TIMP2-TIMP2 TIMP2 chr17 76849206 TIMP2 chr17 76849209 Exonic hg19 NA BG938976 Out-of-frame Intra-chr q25.3 q25.3 124279 ChimerSeq ChiTaRs ChiTaRs SRCAP-SRCAP SRCAP chr16 30740514 SRCAP chr16 30740790 Exonic hg19 NA BQ361746 Out-of-frame Intra-chr p11.2 Transcription factor p11.2 Transcription factor 124280 ChimerSeq ChiTaRs ChiTaRs TBRG1-TBRG1 TBRG1 chr11 124494259 TBRG1 chr11 124493621 Exonic hg19 NA AI963686 Out-of-frame Intra-chr q24.2 Tumor suppressor gene q24.2 Tumor suppressor gene 124281 ChimerSeq ChiTaRs ChiTaRs USP2-KCNK9 USP2 chr11 119238203 KCNK9 chr8 140672040 Exonic hg19 NA AL162006 Out-of-frame Inter-chr q23.3 q24.3 124282 ChimerSeq ChiTaRs ChiTaRs RSAD1-RSAD1 RSAD1 chr17 48562893 RSAD1 chr17 48562463 Exonic hg19 NA AA345976 Out-of-frame Intra-chr q21.33 q21.33 124283 ChimerSeq ChiTaRs ChiTaRs TLE3-PLEKHG2 TLE3 chr15 70362472 PLEKHG2 chr19 39913373 Exonic hg19 NA BF805406 Out-of-frame Inter-chr q23 q13.2 124284 ChimerSeq ChiTaRs ChiTaRs PDXDC1-TUBGCP4 PDXDC1 chr16 15130900 TUBGCP4 chr15 43672473 Exonic hg19 NA AW893816 Out-of-frame Inter-chr p13.11 q15.3 124285 ChimerSeq ChiTaRs ChiTaRs RNF10-RNF10 RNF10 chr12 120995254 RNF10 chr12 120995361 Exonic hg19 NA AA128506 Out-of-frame Intra-chr q24.31 q24.31 124286 ChimerSeq ChiTaRs ChiTaRs HNRNPM-HNRNPM HNRNPM chr19 8545336 HNRNPM chr19 8544173 Exonic hg19 NA AA993176 Out-of-frame Intra-chr p13.2 p13.2 124287 ChimerSeq ChiTaRs ChiTaRs POU2AF1-FKBP5 POU2AF1 chr11 111223464 FKBP5 chr6 35542565 Exonic hg19 NA AI761256 Out-of-frame Inter-chr q23.1 Transcription factor p21.31 124288 ChimerSeq ChiTaRs ChiTaRs NMT1-ST5 NMT1 chr17 43144486 ST5 chr11 8737336 Exonic hg19 NA AU140616 Out-of-frame Inter-chr q21.31 p15.4 Tumor suppressor gene 124289 ChimerSeq ChiTaRs ChiTaRs PHF12-PHF12 PHF12 chr17 27274919 PHF12 chr17 27274905 Exonic hg19 NA BU608416 Out-of-frame Intra-chr q11.2 q11.2 124290 ChimerSeq ChiTaRs ChiTaRs ABHD12B-KIFC1 ABHD12B chr14 51365602 KIFC1 chr6 4852482 Exonic hg19 NA BE095196 Out-of-frame Inter-chr q22.1 124291 ChimerSeq ChiTaRs ChiTaRs ZFP36L1-TMED9 ZFP36L1 chr14 69256090 TMED9 chr5 177022906 Exonic hg19 NA BF382756 Out-of-frame Inter-chr q24.1 q35.3 124292 ChimerSeq ChiTaRs ChiTaRs ERBB3-ENTPD7 ERBB3 chr12 56496995 ENTPD7 chr10 101466377 Exonic hg19 NA AW994886 Out-of-frame Inter-chr q13.2 Oncogene q24.2 124293 ChimerSeq ChiTaRs ChiTaRs ACSF2-CYFIP1 ACSF2 chr17 48548847 CYFIP1 chr15 22962253 Exonic hg19 NA BF091876 Out-of-frame Inter-chr q21.33 q11.2 124294 ChimerSeq ChiTaRs ChiTaRs COL6A1-DOT1L COL6A1 chr21 47420141 DOT1L chr19 2219943 Exonic hg19 NA BF847866 Out-of-frame Inter-chr q22.3 p13.3 Oncogene Transcription factor 124295 ChimerSeq ChiTaRs ChiTaRs ACIN1-PTPRN2 ACIN1 chr14 23545868 PTPRN2 chr7 157625033 Exonic hg19 NA BF363006 Out-of-frame Inter-chr q11.2 q36.3 124296 ChimerSeq ChiTaRs ChiTaRs GTF2A2-LDB3 GTF2A2 chr15 59944503 LDB3 chr10 88494941 Exonic hg19 NA F37086 Out-of-frame Inter-chr q22.2 q23.2 124297 ChimerSeq ChiTaRs ChiTaRs CCDC117-UXT CCDC117 chr22 29185161 UXT chrX 47511195 Exonic hg19 NA BF433106 Out-of-frame Inter-chr q12.1 p11.23 124298 ChimerSeq ChiTaRs ChiTaRs CLPX-CLPX CLPX chr15 65455443 CLPX chr15 65452421 Exonic hg19 NA AW847646 Out-of-frame Intra-chr q22.31 q22.31 124299 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65268786 MALAT1 chr11 65269153 Exonic hg19 NA AI824606 Out-of-frame Intra-chr q13.1 q13.1 124300 ChimerSeq ChiTaRs ChiTaRs CLTC-FCHO2 CLTC chr17 57771718 FCHO2 chr5 72383502 Exonic hg19 NA AI989296 Out-of-frame Inter-chr q23.1 q13.2 124301 ChimerSeq ChiTaRs ChiTaRs PITPNB-ARHGDIB PITPNB chr22 28248162 ARHGDIB chr12 15095371 Exonic hg19 NA BF916396 Out-of-frame Inter-chr q12.1 p12.3 124302 ChimerSeq ChiTaRs ChiTaRs PALM3-SLC17A7 PALM3 chr19 14165204 SLC17A7 chr19 49933485 Exonic hg19 NA BQ345536 Out-of-frame Intra-chr p13.12 q13.33 124303 ChimerSeq ChiTaRs ChiTaRs DUOX2-TAB2 DUOX2 chr15 45386376 TAB2 chr6 149699821 Exonic hg19 NA BG993206 Out-of-frame Inter-chr q21.1 q25.1 124304 ChimerSeq ChiTaRs ChiTaRs USP22-DHCR24 USP22 chr17 20903330 DHCR24 chr1 55352289 Exonic hg19 NA AI369276 Out-of-frame Inter-chr p11.2 p32.3 124305 ChimerSeq ChiTaRs ChiTaRs ZNF263-ZNF263 ZNF263 chr16 3341454 ZNF263 chr16 3341144 Exonic hg19 NA BF588566 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Transcription factor 124306 ChimerSeq ChiTaRs ChiTaRs ZNF605-NCAN ZNF605 chr12 133504973 NCAN chr19 19360841 Exonic hg19 NA T05316 Out-of-frame Inter-chr q24.33 Transcription factor p13.11 124307 ChimerSeq ChiTaRs ChiTaRs EEF2-EEF2 EEF2 chr19 3980915 EEF2 chr19 3976336 Exonic hg19 NA BE763496 Out-of-frame Intra-chr p13.3 p13.3 124308 ChimerSeq ChiTaRs ChiTaRs HEXIM2-UBE2D2 HEXIM2 chr17 43248939 UBE2D2 chr5 138979955 Exonic hg19 NA BE787286 Out-of-frame Inter-chr q21.31 q31.2 124309 ChimerSeq ChiTaRs ChiTaRs ATXN3-THSD7A ATXN3 chr14 92537366 THSD7A chr7 11676452 Exonic hg19 NA AI357266 Out-of-frame Inter-chr q32.12 p21.3 124310 ChimerSeq ChiTaRs ChiTaRs EMG1-ZNF280D EMG1 chr12 7089098 ZNF280D chr15 56993246 Exonic hg19 NA BU622286 Out-of-frame Inter-chr p13.31 q21.3 Transcription factor 124311 ChimerSeq ChiTaRs ChiTaRs GGA2-NUCKS1 GGA2 chr16 23477896 NUCKS1 chr1 205683186 Exonic hg19 NA BQ338666 Out-of-frame Inter-chr p12.2 q32.1 124312 ChimerSeq ChiTaRs ChiTaRs MALAT1-MAML2 MALAT1 chr11 65266867 MAML2 chr11 95984749 Exonic hg19 NA BF771336 Out-of-frame Intra-chr q13.1 q21 Oncogene 124313 ChimerSeq ChiTaRs ChiTaRs MALAT1-TRA2B MALAT1 chr11 65266730 TRA2B chr3 185649465 Exonic hg19 NA AV755596 Out-of-frame Inter-chr q13.1 q27.2 124314 ChimerSeq ChiTaRs ChiTaRs GRAMD1B-GRAMD1B GRAMD1B chr11 123427521 GRAMD1B chr11 123424926 Exonic hg19 NA DW424986 Out-of-frame Intra-chr q24.1 q24.1 124315 ChimerSeq ChiTaRs ChiTaRs GTF3A-MCM2 GTF3A chr13 28014244 MCM2 chr3 127318322 Exonic hg19 NA BC012756 Out-of-frame Inter-chr q12.2 Transcription factor q21.3 124316 ChimerSeq ChiTaRs ChiTaRs LOC100507377-LOC100507377 LOC100507377 chr12 74637146 LOC100507377 chr12 74635965 Exonic hg19 NA BX105306 Out-of-frame Intra-chr 124317 ChimerSeq ChiTaRs ChiTaRs CRK-CRK CRK chr17 1334758 CRK chr17 1333956 Exonic hg19 NA AI368616 Out-of-frame Intra-chr p13.3 p13.3 124318 ChimerSeq ChiTaRs ChiTaRs DDX5-PRKCB DDX5 chr17 62502458 PRKCB chr16 24166004 Exonic hg19 NA CD683976 5'UTR-CDS Inter-chr q23.3 p12.2 Tumor suppressor gene 124319 ChimerSeq ChiTaRs ChiTaRs ARHGAP42-ARHGAP42 ARHGAP42 chr11 100583175 ARHGAP42 chr11 100597775 Exonic hg19 NA AW015536 Out-of-frame Intra-chr q22.1 q22.1 124320 ChimerSeq ChiTaRs ChiTaRs AATF-GABRR2 AATF chr17 35378253 GABRR2 chr6 90008002 Exonic hg19 NA BF334226 Out-of-frame Inter-chr q15 124321 ChimerSeq ChiTaRs ChiTaRs PKNOX1-PKNOX1 PKNOX1 chr21 44438340 PKNOX1 chr21 44441462 Exonic hg19 NA BE720096 Out-of-frame Intra-chr q22.3 Tumor suppressor gene Transcription factor q22.3 Tumor suppressor gene Transcription factor 124322 ChimerSeq ChiTaRs ChiTaRs VAT1-VAT1 VAT1 chr17 41166869 VAT1 chr17 41167488 Exonic hg19 NA BF881836 Out-of-frame Intra-chr q21.31 q21.31 124323 ChimerSeq ChiTaRs ChiTaRs GLG1-SPARC GLG1 chr16 74497364 SPARC chr5 151043648 Exonic hg19 NA AI360976 Out-of-frame Inter-chr q23.1 q33.1 Tumor suppressor gene 124324 ChimerSeq ChiTaRs ChiTaRs ABR-ABR ABR chr17 907760 ABR chr17 907761 Exonic hg19 NA CN348646 Out-of-frame Intra-chr p13.3 p13.3 124325 ChimerSeq ChiTaRs ChiTaRs FGD4-YEATS2 FGD4 chr12 32748464 YEATS2 chr3 183482909 Exonic hg19 NA BF359356 Out-of-frame Inter-chr p11.21 q27.1 124326 ChimerSeq ChiTaRs ChiTaRs SRRM2-SRRM2 SRRM2 chr16 2812176 SRRM2 chr16 2816438 Exonic hg19 NA AW889746 Out-of-frame Intra-chr p13.3 p13.3 124327 ChimerSeq ChiTaRs ChiTaRs HN1-PATZ1 HN1 chr17 73132283 PATZ1 chr22 31741373 Exonic hg19 NA AI936646 Out-of-frame Inter-chr q12.2 Transcription factor 124328 ChimerSeq ChiTaRs ChiTaRs NCAM2-ILF2 NCAM2 chr21 22827553 ILF2 chr1 153637724 Exonic hg19 NA AI207686 Out-of-frame Inter-chr q21.1 Tumor suppressor gene q21.3 124329 ChimerSeq ChiTaRs ChiTaRs RPS27L-UBR2 RPS27L chr15 63449683 UBR2 chr6 42604150 Exonic hg19 NA AW474016 Out-of-frame Inter-chr q22.2 p21.1 124330 ChimerSeq ChiTaRs ChiTaRs AKT2-U2AF2 AKT2 chr19 40741057 U2AF2 chr19 56170673 Exonic hg19 NA BI021056 Out-of-frame Intra-chr q13.2 AGC:Akt Oncogene q13.42 124331 ChimerSeq ChiTaRs ChiTaRs LRRC59-MAP4K4 LRRC59 chr17 48469865 MAP4K4 chr2 102508384 Exonic hg19 NA BF795076 Out-of-frame Inter-chr q21.33 q11.2 124332 ChimerSeq ChiTaRs ChiTaRs SMAD4-SMAD4 SMAD4 chr18 48584767 SMAD4 chr18 48581281 Exonic hg19 NA AL047996 Out-of-frame Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q21.2 Oncogene Tumor suppressor gene Transcription factor 124333 ChimerSeq ChiTaRs ChiTaRs ADNP-TPRG1L ADNP chr20 49507685 TPRG1L chr1 3545486 Exonic hg19 NA BF038276 Out-of-frame Inter-chr q13.13 Transcription factor p36.32 124334 ChimerSeq ChiTaRs ChiTaRs CLEC18A-PRRC2B CLEC18A chr16 70043692 PRRC2B chr9 134364824 Exonic hg19 NA BF931966 Out-of-frame Inter-chr q22.1 q34.13 124335 ChimerSeq ChiTaRs ChiTaRs ANO6-FAM129A ANO6 chr12 45824131 FAM129A chr1 184760836 Exonic hg19 NA BF858626 Out-of-frame Inter-chr q12 q25.3 124336 ChimerSeq ChiTaRs ChiTaRs RNMTL1-DVL2 RNMTL1 chr17 695748 DVL2 chr17 7133162 Exonic hg19 NA AA448866 Out-of-frame Intra-chr p13.1 124337 ChimerSeq ChiTaRs ChiTaRs SDK2-SDK2 SDK2 chr17 71623949 SDK2 chr17 71622867 Exonic hg19 NA AK025096 Out-of-frame Intra-chr q25.1 q25.1 124338 ChimerSeq ChiTaRs ChiTaRs ARHGAP32-DONSON ARHGAP32 chr11 128838294 DONSON chr21 35153717 Exonic hg19 NA BE817796 Out-of-frame Inter-chr q24.3 q22.11 124339 ChimerSeq ChiTaRs ChiTaRs TMBIM6-TMBIM6 TMBIM6 chr12 50158516 TMBIM6 chr12 50158155 Exonic hg19 NA CA944946 Out-of-frame Intra-chr q13.12 q13.12 124340 ChimerSeq ChiTaRs ChiTaRs KPNB1-KPNB1 KPNB1 chr17 45745764 KPNB1 chr17 45745755 Exonic hg19 NA BE897946 Out-of-frame Intra-chr q21.32 q21.32 124341 ChimerSeq ChiTaRs ChiTaRs TTR-KPNB1 TTR chr18 29178784 KPNB1 chr17 45755446 Exonic hg19 NA BE466906 Out-of-frame Inter-chr q12.1 q21.32 124342 ChimerSeq ChiTaRs ChiTaRs NEAT1-NEAT1 NEAT1 chr11 65191054 NEAT1 chr11 65190595 Exonic hg19 NA DW411476 Out-of-frame Intra-chr q13.1 q13.1 124343 ChimerSeq ChiTaRs ChiTaRs NDUFV3-SHFM1 NDUFV3 chr21 44329783 SHFM1 chr7 96302807 Exonic hg19 NA CD367876 Out-of-frame Inter-chr q22.3 124344 ChimerSeq ChiTaRs ChiTaRs UBA2-HS2ST1 UBA2 chr19 34955033 HS2ST1 chr1 87511808 Exonic hg19 NA BP376296 Out-of-frame Inter-chr q13.11 p22.3 124345 ChimerSeq ChiTaRs ChiTaRs RABEP1-EIF4G1 RABEP1 chr17 5281981 EIF4G1 chr3 184039498 Exonic hg19 NA BE466786 Out-of-frame Inter-chr p13.2 q27.1 124346 ChimerSeq ChiTaRs ChiTaRs SNPH-MAP1B SNPH chr20 1288153 MAP1B chr5 71504819 Exonic hg19 NA M61996 Out-of-frame Inter-chr p13 q13.2 124347 ChimerSeq ChiTaRs ChiTaRs CAMTA2-DAP CAMTA2 chr17 4884644 DAP chr5 10755618 Exonic hg19 NA BQ336206 Out-of-frame Inter-chr p13.2 Transcription factor p15.2 124348 ChimerSeq ChiTaRs ChiTaRs TNS4-TNS4 TNS4 chr17 38643129 TNS4 chr17 38638010 Exonic hg19 NA DB361336 Out-of-frame Intra-chr q21.2 q21.2 124349 ChimerSeq ChiTaRs ChiTaRs CD63-ZNF569 CD63 chr12 56119617 ZNF569 chr19 37956290 Exonic hg19 NA AA903666 Out-of-frame Inter-chr q13.2 q13.12 Transcription factor 124350 ChimerSeq ChiTaRs ChiTaRs TPM1-TPM2 TPM1 chr15 63352487 TPM2 chr9 35683599 Exonic hg19 NA BF371086 Out-of-frame Inter-chr q22.2 p13.3 124351 ChimerSeq ChiTaRs ChiTaRs NIPA1-SMPD1 NIPA1 chr15 23086291 SMPD1 chr11 6416059 Exonic hg19 NA AK057846 Out-of-frame Inter-chr q11.2 p15.4 124352 ChimerSeq ChiTaRs ChiTaRs BTBD2-RPS17L BTBD2 chr19 2003587 RPS17L chr15 83205504 Exonic hg19 NA BC004886 Out-of-frame Inter-chr p13.3 124353 ChimerSeq ChiTaRs ChiTaRs IGHV3OR16-7-PPRC1 IGHV3OR16-7 chr16 31985195 PPRC1 chr10 103908898 Exonic hg19 NA GQ504970 Out-of-frame Inter-chr p11.2 q24.32 124354 ChimerSeq ChiTaRs ChiTaRs KRT13-KRT13 KRT13 chr17 39657454 KRT13 chr17 39657452 Exonic hg19 NA AW265406 Out-of-frame Intra-chr q21.2 q21.2 124355 ChimerSeq ChiTaRs ChiTaRs CTDSPL2-CTDSPL2 CTDSPL2 chr15 44730137 CTDSPL2 chr15 44724200 Exonic hg19 NA AA007476 Out-of-frame Intra-chr q15.3 q15.3 124356 ChimerSeq ChiTaRs ChiTaRs MAN2B1-MAN2B1 MAN2B1 chr19 12770660 MAN2B1 chr19 12775852 Exonic hg19 NA AI004606 Out-of-frame Intra-chr p13.13 p13.13 124357 ChimerSeq ChiTaRs ChiTaRs RNMT-ATF7 RNMT chr18 13749825 ATF7 chr12 53916847 Exonic hg19 NA BF842806 Out-of-frame Inter-chr p11.21 q13.13 Transcription factor 124358 ChimerSeq ChiTaRs ChiTaRs LUC7L-LUC7L LUC7L chr16 309875 LUC7L chr16 309865 Exonic hg19 NA BF435056 Out-of-frame Intra-chr p13.3 p13.3 124359 ChimerSeq ChiTaRs ChiTaRs HPD-HPD HPD chr12 122296765 HPD chr12 122287652 Exonic hg19 NA BP348274 Out-of-frame Intra-chr q24.31 q24.31 124360 ChimerSeq ChiTaRs ChiTaRs CCNB1IP1-SZT2 CCNB1IP1 chr14 20797533 SZT2 chr1 43892712 Exonic hg19 NA BQ049764 5'UTR-CDS Inter-chr q11.2 p34.2 124361 ChimerSeq ChiTaRs ChiTaRs GPI-CDC37 GPI chr19 34875322 CDC37 chr19 10506640 Exonic hg19 NA BF870824 Out-of-frame Intra-chr p13.2 124362 ChimerSeq ChiTaRs ChiTaRs GUSBP11-DSCAML1 GUSBP11 chr22 24035685 DSCAML1 chr11 117366916 Exonic hg19 NA BF959814 Out-of-frame Inter-chr q11.23 q23.3 124363 ChimerSeq ChiTaRs ChiTaRs MALAT1-TBC1D10A MALAT1 chr11 65266736 TBC1D10A chr22 30714709 Exonic hg19 NA BQ358844 Out-of-frame Inter-chr q13.1 q12.2 124364 ChimerSeq ChiTaRs ChiTaRs TMEM184B-VPS72 TMEM184B chr22 38626715 VPS72 chr1 151156718 Exonic hg19 NA BF914434 Out-of-frame Inter-chr q13.1 q21.3 124365 ChimerSeq ChiTaRs ChiTaRs GCN1L1-KIAA0825 GCN1L1 chr12 120565354 KIAA0825 chr5 93841152 Exonic hg19 NA GW492778 Out-of-frame Inter-chr q15 124366 ChimerSeq ChiTaRs ChiTaRs ITGAM-AP1G2 ITGAM chr16 31283086 AP1G2 chr14 24029510 Exonic hg19 NA BF898054 Out-of-frame Inter-chr p11.2 q11.2 124367 ChimerSeq ChiTaRs ChiTaRs PTPN9-BUB3 PTPN9 chr15 75816617 BUB3 chr10 124924563 Exonic hg19 NA BG459834 Out-of-frame Inter-chr q24.2 q26.13 124368 ChimerSeq ChiTaRs ChiTaRs FRMD5-FLNA FRMD5 chr15 44290126 FLNA chrX 153576938 Exonic hg19 NA AW580394 Out-of-frame Inter-chr q15.3 q28 Tumor suppressor gene 124369 ChimerSeq ChiTaRs ChiTaRs SEL1L-SEL1L SEL1L chr14 81940577 SEL1L chr14 81940077 Exonic hg19 NA AL045444 Out-of-frame Intra-chr q31.1 q31.1 124370 ChimerSeq ChiTaRs ChiTaRs EIF6-EIF6 EIF6 chr20 33866857 EIF6 chr20 33866964 Exonic hg19 NA BG957584 Out-of-frame Intra-chr q11.22 q11.22 124371 ChimerSeq ChiTaRs ChiTaRs ENTPD5-TCTN3 ENTPD5 chr14 74438597 TCTN3 chr10 97423888 Exonic hg19 NA AW578884 Out-of-frame Inter-chr q24.3 q24.1 124372 ChimerSeq ChiTaRs ChiTaRs DAZAP2-SEPW1 DAZAP2 chr12 51637104 SEPW1 chr19 48287545 Exonic hg19 NA BQ306734 Out-of-frame Inter-chr q13.13 124373 ChimerSeq ChiTaRs ChiTaRs PISD-PISD PISD chr22 32015438 PISD chr22 32015445 Exonic hg19 NA BQ375244 Out-of-frame Intra-chr q12.2 q12.2 124374 ChimerSeq ChiTaRs ChiTaRs NOTCH3-LOC100130992 NOTCH3 chr19 15300121 LOC100130992 chr10 22542644 Exonic hg19 NA BF921564 Out-of-frame Inter-chr p13.12 Oncogene Tumor suppressor gene 124375 ChimerSeq ChiTaRs ChiTaRs NEAT1-PITPNM2 NEAT1 chr11 65194286 PITPNM2 chr12 123483325 Exonic hg19 NA BF843824 Out-of-frame Inter-chr q13.1 q24.31 124376 ChimerSeq ChiTaRs ChiTaRs USP36-USP36 USP36 chr17 76821588 USP36 chr17 76822249 Exonic hg19 NA BF845884 Out-of-frame Intra-chr q25.3 q25.3 124377 ChimerSeq ChiTaRs ChiTaRs SMCHD1-FBXL7 SMCHD1 chr18 2661878 FBXL7 chr5 15733479 Exonic hg19 NA AJ711804 Out-of-frame Inter-chr p11.32 Tumor suppressor gene p15.1 124378 ChimerSeq ChiTaRs ChiTaRs SFSWAP-CYP11A1 SFSWAP chr12 132216410 CYP11A1 chr15 74630957 Exonic hg19 NA BG011364 Out-of-frame Inter-chr q24.33 q24.1 124379 ChimerSeq ChiTaRs ChiTaRs ATP2C2-ATP2C2 ATP2C2 chr16 84479968 ATP2C2 chr16 84486742 Exonic hg19 NA AI863694 Out-of-frame Intra-chr q24.1 q24.1 124380 ChimerSeq ChiTaRs ChiTaRs RFX2-RFX2 RFX2 chr19 6039842 RFX2 chr19 6013055 Exonic hg19 NA BF902834 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 Transcription factor 124381 ChimerSeq ChiTaRs ChiTaRs CRHR1-TTBK1 CRHR1 chr17 43793654 TTBK1 chr6 43241897 Exonic hg19 NA BF957724 Out-of-frame Inter-chr q21.31 p21.1 CK1:TTBK 124382 ChimerSeq ChiTaRs ChiTaRs JKAMP-DNM3 JKAMP chr14 59970834 DNM3 chr1 172120937 Exonic hg19 NA BF949574 Out-of-frame Inter-chr q23.1 q24.3 124383 ChimerSeq ChiTaRs ChiTaRs DUSP16-ELF1 DUSP16 chr12 12629031 ELF1 chr13 41559697 Exonic hg19 NA BF798804 Out-of-frame Inter-chr q14.11 Transcription factor 124384 ChimerSeq ChiTaRs ChiTaRs PPP6R1-IGSF21 PPP6R1 chr19 55741219 IGSF21 chr1 18644969 Exonic hg19 NA AW468174 Out-of-frame Inter-chr q13.42 p36.13 124385 ChimerSeq ChiTaRs ChiTaRs RBBP6-RBBP6 RBBP6 chr16 24581460 RBBP6 chr16 24581165 Exonic hg19 NA BQ776164 Out-of-frame Intra-chr p12.1 p12.1 124386 ChimerSeq ChiTaRs ChiTaRs ZNF333-KLHDC9 ZNF333 chr19 14820628 KLHDC9 chr1 161069512 Exonic hg19 NA AK123144 Out-of-frame Inter-chr p13.12 Transcription factor q23.3 124387 ChimerSeq ChiTaRs ChiTaRs RPS9-ZNF7 RPS9 chr19 54711515 ZNF7 chr8 146067220 Exonic hg19 NA AW771764 3'UTR-CDS Inter-chr q24.3 Transcription factor 124388 ChimerSeq ChiTaRs ChiTaRs PTTG1IP-PTTG1IP PTTG1IP chr21 46269724 PTTG1IP chr21 46269893 Exonic hg19 NA BU608064 Out-of-frame Intra-chr q22.3 q22.3 124389 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65272267 MALAT1 chr11 65272241 Exonic hg19 NA AW381344 Out-of-frame Intra-chr q13.1 q13.1 124390 ChimerSeq ChiTaRs ChiTaRs MLL-RBMS2 MLL chr11 118396270 RBMS2 chr12 56988211 Exonic hg19 NA BF810814 Out-of-frame Inter-chr q23.3 q13.3 124391 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65266824 MALAT1 chr11 65266565 Exonic hg19 NA BU678504 Out-of-frame Intra-chr q13.1 q13.1 124392 ChimerSeq ChiTaRs ChiTaRs CSRNP2-CSRNP2 CSRNP2 chr12 51463880 CSRNP2 chr12 51463982 Exonic hg19 NA BG119524 Out-of-frame Intra-chr q13.12 Transcription factor q13.12 Transcription factor 124393 ChimerSeq ChiTaRs ChiTaRs COL1A1-GRID1 COL1A1 chr17 48262801 GRID1 chr10 88115764 Exonic hg19 NA AI804474 Out-of-frame Inter-chr q21.33 Oncogene q23.2 124394 ChimerSeq ChiTaRs ChiTaRs YPEL2-YPEL2 YPEL2 chr17 57475062 YPEL2 chr17 57476902 Exonic hg19 NA AW172264 Out-of-frame Intra-chr q22 q22 124395 ChimerSeq ChiTaRs ChiTaRs CBFB-CBFB CBFB chr16 67134793 CBFB chr16 67134770 Exonic hg19 NA BG177224 Out-of-frame Intra-chr q22.1 q22.1 124396 ChimerSeq ChiTaRs ChiTaRs TRIM29-TRIM29 TRIM29 chr11 119996519 TRIM29 chr11 119996566 Exonic hg19 NA BG996534 Out-of-frame Intra-chr q23.3 q23.3 124397 ChimerSeq ChiTaRs ChiTaRs VASH1-PRKDC VASH1 chr14 77246867 PRKDC chr8 48844131 Exonic hg19 NA BG961504 Out-of-frame Inter-chr q24.3 q11.21 Oncogene 124398 ChimerSeq ChiTaRs ChiTaRs ACTG1-RPS5 ACTG1 chr17 79477287 RPS5 chr19 58898661 Exonic hg19 NA BQ227834 Out-of-frame Inter-chr q25.3 q13.43 124399 ChimerSeq ChiTaRs ChiTaRs NAPB-ZNHIT3 NAPB chr20 23402103 ZNHIT3 chr17 34842522 Exonic hg19 NA AK096494 Out-of-frame Inter-chr p11.21 q12 124400 ChimerSeq ChiTaRs ChiTaRs KRT7-KRT7 KRT7 chr12 52631351 KRT7 chr12 52627030 Exonic hg19 NA AU122394 Out-of-frame Intra-chr q13.13 q13.13 124401 ChimerSeq ChiTaRs ChiTaRs B4GALT5-FBXW4 B4GALT5 chr20 48277135 FBXW4 chr10 103432775 Exonic hg19 NA BF851864 Out-of-frame Inter-chr q13.13 q24.32 124402 ChimerSeq ChiTaRs ChiTaRs BCL7A-BCL7A BCL7A chr12 122468687 BCL7A chr12 122497191 Exonic hg19 NA AW204714 CDS-3'UTR Intra-chr 124403 ChimerSeq ChiTaRs ChiTaRs ITGB3-TTC12 ITGB3 chr17 45421652 TTC12 chr11 113230098 Exonic hg19 NA BF800064 Out-of-frame Inter-chr q21.32 Oncogene Tumor suppressor gene q23.2 124404 ChimerSeq ChiTaRs ChiTaRs GATM-TSEN2 GATM chr15 45654108 TSEN2 chr3 12560544 Exonic hg19 NA BF946024 Out-of-frame Inter-chr q21.1 p25.2 124405 ChimerSeq ChiTaRs ChiTaRs PLEKHM1P-KIAA1671 PLEKHM1P chr17 62788395 KIAA1671 chr22 25592661 Exonic hg19 NA AK123704 Out-of-frame Inter-chr q11.23 124406 ChimerSeq ChiTaRs ChiTaRs TTLL5-TTLL5 TTLL5 chr14 76420980 TTLL5 chr14 76420951 Exonic hg19 NA BG257644 Out-of-frame Intra-chr q24.3 q24.3 124407 ChimerSeq ChiTaRs ChiTaRs TBC1D17-MEF2C TBC1D17 chr19 50388854 MEF2C chr5 88161407 Exonic hg19 NA BF884734 Out-of-frame Inter-chr q13.33 q14.3 Transcription factor 124408 ChimerSeq ChiTaRs ChiTaRs CALM3-TROVE2 CALM3 chr19 47113269 TROVE2 chr1 193057032 Exonic hg19 NA BQ327094 Out-of-frame Inter-chr q13.32 q31.2 124409 ChimerSeq ChiTaRs ChiTaRs CARD14-STK4 CARD14 chr17 78155919 STK4 chr20 43704582 Exonic hg19 NA AW811264 Out-of-frame Inter-chr q25.3 q13.12 124410 ChimerSeq ChiTaRs ChiTaRs LAMA3-PKP1 LAMA3 chr18 21531739 PKP1 chr1 201292235 Exonic hg19 NA BF830444 Out-of-frame Inter-chr q11.2 q32.1 124411 ChimerSeq ChiTaRs ChiTaRs SMAD3-SMAD3 SMAD3 chr15 67399162 SMAD3 chr15 67398966 Exonic hg19 NA BF770364 Out-of-frame Intra-chr q22.33 Transcription factor q22.33 Transcription factor 124412 ChimerSeq ChiTaRs ChiTaRs FERMT1-FERMT1 FERMT1 chr20 6056196 FERMT1 chr20 6055969 Exonic hg19 NA BG059054 Out-of-frame Intra-chr p12.3 p12.3 124413 ChimerSeq ChiTaRs ChiTaRs TRMT61A-TRMT61A TRMT61A chr14 104001663 TRMT61A chr14 104001639 Exonic hg19 NA BG180204 Out-of-frame Intra-chr q32.33 q32.33 124414 ChimerSeq ChiTaRs ChiTaRs NFIX-NFIX NFIX chr19 13207783 NFIX chr19 13208397 Exonic hg19 NA BU627754 Out-of-frame Intra-chr p13.13 Transcription factor p13.13 Transcription factor 124415 ChimerSeq ChiTaRs ChiTaRs PRKCA-PBX1 PRKCA chr17 64327270 PBX1 chr1 164712457 Exonic hg19 NA BG998534 Out-of-frame Inter-chr q24.2 q23.3 Oncogene Transcription factor 124416 ChimerSeq ChiTaRs ChiTaRs TTC12-TTC12 TTC12 chr11 113202091 TTC12 chr11 113201745 Exonic hg19 NA BF842124 Out-of-frame Intra-chr q23.2 q23.2 124417 ChimerSeq ChiTaRs ChiTaRs FURIN-TNFSF12-TNFSF13 FURIN chr15 91426687 TNFSF12-TNFSF13 chr17 7462460 Exonic hg19 NA BG924324 Out-of-frame Inter-chr q26.1 p13.1 Tumor suppressor gene 124418 ChimerSeq ChiTaRs ChiTaRs PHKB-ZNF841 PHKB chr16 47734881 ZNF841 chr19 52597743 Exonic hg19 NA BG992384 Out-of-frame Inter-chr q12.1 q13.41 Transcription factor 124419 ChimerSeq ChiTaRs ChiTaRs XRN2-TCERG1 XRN2 chr20 21308913 TCERG1 chr5 145843511 Exonic hg19 NA BF947784 Out-of-frame Inter-chr p11.22 q32 124420 ChimerSeq ChiTaRs ChiTaRs BCL2L13-BCL2L13 BCL2L13 chr22 18210290 BCL2L13 chr22 18210730 Exonic hg19 NA AI935654 Out-of-frame Intra-chr q11.21 q11.21 124421 ChimerSeq ChiTaRs ChiTaRs SLC35E3-SLC35E3 SLC35E3 chr12 69153957 SLC35E3 chr12 69157422 Exonic hg19 NA AI970474 Out-of-frame Intra-chr q15 q15 124422 ChimerSeq ChiTaRs ChiTaRs SNPH-SNPH SNPH chr20 1288840 SNPH chr20 1285918 Exonic hg19 NA BP348884 Out-of-frame Intra-chr p13 p13 124423 ChimerSeq ChiTaRs ChiTaRs MALAT1-TBC1D10A MALAT1 chr11 65267100 TBC1D10A chr22 30714951 Exonic hg19 NA BG986934 Out-of-frame Inter-chr q13.1 q12.2 124424 ChimerSeq ChiTaRs ChiTaRs SPTLC2-ACTB SPTLC2 chr14 77972521 ACTB chr7 5567258 Exonic hg19 NA AW803684 Out-of-frame Inter-chr q24.3 p22.1 124425 ChimerSeq ChiTaRs ChiTaRs TSC22D1-BPGM TSC22D1 chr13 45008606 BPGM chr7 134363825 Exonic hg19 NA BQ367874 Out-of-frame Inter-chr q14.11 Tumor suppressor gene Transcription factor q33 124426 ChimerSeq ChiTaRs ChiTaRs GAPDH-GAPDH GAPDH chr12 6646277 GAPDH chr12 6646154 Exonic hg19 NA BG391044 Out-of-frame Intra-chr p13.31 p13.31 124427 ChimerSeq ChiTaRs ChiTaRs TNS4-GPRC5B TNS4 chr17 38632145 GPRC5B chr16 19870553 Exonic hg19 NA BU754064 Out-of-frame Inter-chr q21.2 p12.3 124428 ChimerSeq ChiTaRs ChiTaRs ACKR2-CHST10 ACKR2 chr17 40831828 CHST10 chr2 101008323 Exonic hg19 NA BP392914 Out-of-frame Inter-chr p22.1 q11.2 Tumor suppressor gene 124429 ChimerSeq ChiTaRs ChiTaRs MYO1C-MYO1C MYO1C chr17 1368090 MYO1C chr17 1386161 Exonic hg19 NA BQ425374 Out-of-frame Intra-chr p13.3 p13.3 124430 ChimerSeq ChiTaRs ChiTaRs KLC1-PVRL1 KLC1 chr14 104152479 PVRL1 chr11 119534242 Exonic hg19 NA BF843964 Out-of-frame Inter-chr q32.33 124431 ChimerSeq ChiTaRs ChiTaRs COL1A1-TRIT1 COL1A1 chr17 48262757 TRIT1 chr1 40343685 Exonic hg19 NA BQ183204 Out-of-frame Inter-chr q21.33 Oncogene p34.2 Tumor suppressor gene 124432 ChimerSeq ChiTaRs ChiTaRs ARHGAP35-ARHGAP35 ARHGAP35 chr19 47506810 ARHGAP35 chr19 47505461 Exonic hg19 NA BG281504 Out-of-frame Intra-chr q13.32 Transcription factor q13.32 Transcription factor 124433 ChimerSeq ChiTaRs ChiTaRs COG4-PHF17 COG4 chr16 70516686 PHF17 chr4 129735133 Exonic hg19 NA BQ345034 Out-of-frame Inter-chr q22.1 124434 ChimerSeq ChiTaRs ChiTaRs RAB11FIP3-NCK1 RAB11FIP3 chr16 546434 NCK1 chr3 136665066 Exonic hg19 NA BG998714 Out-of-frame Inter-chr q22.3 124435 ChimerSeq ChiTaRs ChiTaRs CLMN-LOC100506714 CLMN chr14 95659718 LOC100506714 chr22 45538443 Exonic hg19 NA BG567994 Out-of-frame Inter-chr q32.13 124436 ChimerSeq ChiTaRs ChiTaRs SIPA1L3-LPAR3 SIPA1L3 chr19 38535211 LPAR3 chr1 85355514 Exonic hg19 NA AW593591 Out-of-frame Inter-chr q13.13 p22.3 124437 ChimerSeq ChiTaRs ChiTaRs CTIF-GLTSCR1 CTIF chr18 46353985 GLTSCR1 chr19 48118351 Exonic hg19 NA BF931044 Out-of-frame Inter-chr Tumor suppressor gene 124438 ChimerSeq ChiTaRs ChiTaRs DNAJC3-DNAJC3 DNAJC3 chr13 96445108 DNAJC3 chr13 96377448 Exonic hg19 NA AV747684 Out-of-frame Intra-chr q32.1 q32.1 124439 ChimerSeq ChiTaRs ChiTaRs HSP90AA1-HSP90AA1 HSP90AA1 chr14 102549517 HSP90AA1 chr14 102549421 Exonic hg19 NA BU685904 Out-of-frame Intra-chr q32.31 Oncogene q32.31 Oncogene 124440 ChimerSeq ChiTaRs ChiTaRs ELL3-TENM4 ELL3 chr15 44086249 TENM4 chr11 79145163 Exonic hg19 NA AW512214 Out-of-frame Inter-chr q15.3 q14.1 124441 ChimerSeq ChiTaRs ChiTaRs ZC3H4-ZC3H4 ZC3H4 chr19 47567697 ZC3H4 chr19 47567676 Exonic hg19 NA BQ186744 Out-of-frame Intra-chr q13.32 q13.32 124442 ChimerSeq ChiTaRs ChiTaRs ACTN1-KDM6B ACTN1 chr14 69387711 KDM6B chr17 7752321 Exonic hg19 NA BF810594 Out-of-frame Inter-chr q24.1 p13.1 124443 ChimerSeq ChiTaRs ChiTaRs PRDX2-ZNF462 PRDX2 chr19 12907721 ZNF462 chr9 109637939 Exonic hg19 NA BU742294 Out-of-frame Inter-chr p13.13 q31.2 Transcription factor 124444 ChimerSeq ChiTaRs ChiTaRs PIP5K1C-AKAP13 PIP5K1C chr19 3692098 AKAP13 chr15 86166954 Exonic hg19 NA BF873394 Out-of-frame Inter-chr p13.3 q25.3 124445 ChimerSeq ChiTaRs ChiTaRs VPS13C-SUPT16H VPS13C chr15 62209775 SUPT16H chr14 21819920 Exonic hg19 NA BF852894 Out-of-frame Inter-chr q22.2 q11.2 124446 ChimerSeq ChiTaRs ChiTaRs EIF3D-FAM111A EIF3D chr22 36922128 FAM111A chr11 58919381 Exonic hg19 NA BG991794 Out-of-frame Inter-chr q12.3 q12.1 124447 ChimerSeq ChiTaRs ChiTaRs BEGAIN-BEGAIN BEGAIN chr14 101005654 BEGAIN chr14 101006851 Exonic hg19 NA BF952154 Out-of-frame Intra-chr q32.2 q32.2 124448 ChimerSeq ChiTaRs ChiTaRs UBC-MYC UBC chr12 125399121 MYC chr8 128751111 Exonic hg19 NA BF766594 Out-of-frame Inter-chr q24.31 q24.21 Oncogene Transcription factor 124449 ChimerSeq ChiTaRs ChiTaRs RBCK1-TCTEX1D2 RBCK1 chr20 398475 TCTEX1D2 chr3 196026913 Exonic hg19 NA BF943534 Out-of-frame Inter-chr p13 Transcription factor q29 124450 ChimerSeq ChiTaRs ChiTaRs ATG16L2-FCHSD2 ATG16L2 chr11 72553431 FCHSD2 chr11 72601731 Exonic hg19 NA AK056634 Out-of-frame Intra-chr q13.4 q13.4 124451 ChimerSeq ChiTaRs ChiTaRs BRF1-GYS1 BRF1 chr14 105716895 GYS1 chr19 49471387 Exonic hg19 NA BU601594 Out-of-frame Inter-chr q32.33 Tumor suppressor gene q13.33 124452 ChimerSeq ChiTaRs ChiTaRs GNA15-FKBP15 GNA15 chr19 3163745 FKBP15 chr9 116025106 Exonic hg19 NA BG272034 Out-of-frame Inter-chr p13.3 q32 124453 ChimerSeq ChiTaRs ChiTaRs ZNF217-RSBN1L ZNF217 chr20 52184202 RSBN1L chr7 77346521 Exonic hg19 NA AW794844 Out-of-frame Inter-chr q13.2 Oncogene Transcription factor q11.23 124454 ChimerSeq ChiTaRs ChiTaRs VPS13C-AMMECR1 VPS13C chr15 62149059 AMMECR1 chrX 109458811 Exonic hg19 NA AI950984 Out-of-frame Inter-chr q22.2 q23 124455 ChimerSeq ChiTaRs ChiTaRs N4BP2L2-N4BP2L2 N4BP2L2 chr13 33095574 N4BP2L2 chr13 33101545 Exonic hg19 NA BQ331294 Out-of-frame Intra-chr q13.1 q13.1 124456 ChimerSeq ChiTaRs ChiTaRs MDM2-CCT3 MDM2 chr12 69237822 CCT3 chr1 156280758 Exonic hg19 NA BQ353904 Out-of-frame Inter-chr q15 Oncogene q22 124457 ChimerSeq ChiTaRs ChiTaRs RAB3IP-RAB3IP RAB3IP chr12 70190913 RAB3IP chr12 70149171 Exonic hg19 NA BP360754 Out-of-frame Intra-chr q15 q15 124458 ChimerSeq ChiTaRs ChiTaRs H1F0-C16orf46 H1F0 chr22 38203416 C16orf46 chr16 81094678 Exonic hg19 NA AI886384 Out-of-frame Inter-chr q13.1 q23.2 124459 ChimerSeq ChiTaRs ChiTaRs ZNF335-VPS25 ZNF335 chr20 44596243 VPS25 chr17 40931331 Exonic hg19 NA AI908624 Out-of-frame Inter-chr q13.12 Transcription factor q21.2 124460 ChimerSeq ChiTaRs ChiTaRs MYO1E-MYO1E MYO1E chr15 59502756 MYO1E chr15 59510171 Exonic hg19 NA BP353144 Out-of-frame Intra-chr q22.2 q22.2 124461 ChimerSeq ChiTaRs ChiTaRs CRTC3-GIGYF2 CRTC3 chr15 91172619 GIGYF2 chr2 233652009 Exonic hg19 NA BF933094 Out-of-frame Inter-chr q26.1 q37.1 124462 ChimerSeq ChiTaRs ChiTaRs KLK3-LOC646329 KLK3 chr19 51364020 LOC646329 chr7 130581373 Exonic hg19 NA AI826974 3'UTR-3'UTR Inter-chr q13.33 124463 ChimerSeq ChiTaRs ChiTaRs GPI-HDAC8 GPI chr19 34857271 HDAC8 chrX 71708790 Exonic hg19 NA BP302114 Out-of-frame Inter-chr q13.1 124464 ChimerSeq ChiTaRs ChiTaRs KLC1-KLC1 KLC1 chr14 104145883 KLC1 chr14 104151491 Exonic hg19 NA BQ320374 Out-of-frame Intra-chr q32.33 q32.33 124465 ChimerSeq ChiTaRs ChiTaRs LGALS1-TF LGALS1 chr22 38074620 TF chr3 133473543 Exonic hg19 NA BG769694 Out-of-frame Inter-chr q13.1 q22.1 124466 ChimerSeq ChiTaRs ChiTaRs ARHGEF1-KLHL24 ARHGEF1 chr19 42411602 KLHL24 chr3 183354903 Exonic hg19 NA AI862594 Out-of-frame Inter-chr q13.2 q27.1 124467 ChimerSeq ChiTaRs ChiTaRs FCGBP-FCGBP FCGBP chr19 40363089 FCGBP chr19 40362752 Exonic hg19 NA BG981694 Out-of-frame Intra-chr 124468 ChimerSeq ChiTaRs ChiTaRs DAZAP1-IDH3G DAZAP1 chr19 1420000 IDH3G chrX 153052996 Exonic hg19 NA BF902554 Out-of-frame Inter-chr p13.3 q28 124469 ChimerSeq ChiTaRs ChiTaRs CATSPERB-KLC4 CATSPERB chr14 92174057 KLC4 chr6 43029047 Exonic hg19 NA BG006694 Out-of-frame Inter-chr p21.1 124470 ChimerSeq ChiTaRs ChiTaRs TK1-CAMTA1 TK1 chr17 76170734 CAMTA1 chr1 7100596 Exonic hg19 NA BG118054 Out-of-frame Inter-chr q25.3 p36.31 Tumor suppressor gene Transcription factor 124471 ChimerSeq ChiTaRs ChiTaRs MYO18A-MYO18A MYO18A chr17 27442455 MYO18A chr17 27447669 Exonic hg19 NA BF895994 Out-of-frame Intra-chr q11.2 Oncogene q11.2 Oncogene 124472 ChimerSeq ChiTaRs ChiTaRs NEAT1-PHLDB1 NEAT1 chr11 65192203 PHLDB1 chr11 118520848 Exonic hg19 NA BQ366724 Out-of-frame Intra-chr q13.1 q23.3 124473 ChimerSeq ChiTaRs ChiTaRs SAMD4B-SAMD4B SAMD4B chr19 39868335 SAMD4B chr19 39847456 Exonic hg19 NA AU119674 Out-of-frame Intra-chr q13.2 q13.2 124474 ChimerSeq ChiTaRs ChiTaRs ANKRD11-S100A9 ANKRD11 chr16 89484765 S100A9 chr1 153330859 Exonic hg19 NA BF904454 Out-of-frame Inter-chr q24.3 q21.3 124475 ChimerSeq ChiTaRs ChiTaRs CALM3-SCN3A CALM3 chr19 47114039 SCN3A chr2 166043719 Exonic hg19 NA AI760114 3'UTR-5'UTR Inter-chr q13.32 q24.3 124476 ChimerSeq ChiTaRs ChiTaRs C11orf75-BCL7B C11orf75 chr11 93214785 BCL7B chr7 72950686 Exonic hg19 NA AK098204 Out-of-frame Inter-chr q11.23 124477 ChimerSeq ChiTaRs ChiTaRs ERG-CIDEC ERG chr21 39870355 CIDEC chr3 10048206 Exonic hg19 NA BI713036 Out-of-frame Inter-chr q22.2 Oncogene Transcription factor p25.3 124478 ChimerSeq ChiTaRs ChiTaRs PACS2-GPR124 PACS2 chr14 105861550 GPR124 chr8 37701173 Exonic hg19 NA AI803594 Out-of-frame Inter-chr q32.33 124479 ChimerSeq ChiTaRs ChiTaRs NIPSNAP1-DOCK7 NIPSNAP1 chr22 29950900 DOCK7 chr1 63069830 Exonic hg19 NA AV693284 Out-of-frame Inter-chr q12.2 p31.3 124480 ChimerSeq ChiTaRs ChiTaRs STX8-ULK4 STX8 chr17 9182390 ULK4 chr3 41426884 Exonic hg19 NA BF994904 Out-of-frame Inter-chr p13.1 p22.1 Other:ULK 124481 ChimerSeq ChiTaRs ChiTaRs NFE2L1-EFHD1 NFE2L1 chr17 46134726 EFHD1 chr2 233546567 Exonic hg19 NA BG926274 Out-of-frame Inter-chr q21.32 Transcription factor q37.1 124482 ChimerSeq ChiTaRs ChiTaRs SERPINA1-KREMEN1 SERPINA1 chr14 94845857 KREMEN1 chr22 29538266 Exonic hg19 NA AI803294 Out-of-frame Inter-chr q32.13 q12.1 124483 ChimerSeq ChiTaRs ChiTaRs PTPRT-ZCCHC8 PTPRT chr20 41090624 ZCCHC8 chr12 122957435 Exonic hg19 NA AL157434 Out-of-frame Inter-chr q13.11 Oncogene Tumor suppressor gene q24.31 124484 ChimerSeq ChiTaRs ChiTaRs TOM1-TOM1 TOM1 chr22 35743150 TOM1 chr22 35719509 Exonic hg19 NA BG995254 Out-of-frame Intra-chr q12.3 q12.3 124485 ChimerSeq ChiTaRs ChiTaRs SPINT1-CALM3 SPINT1 chr15 41149827 CALM3 chr19 47112181 Exonic hg19 NA BG979974 Out-of-frame Inter-chr q15.1 q13.32 124486 ChimerSeq ChiTaRs ChiTaRs RBBP6-VWF RBBP6 chr16 24551904 VWF chr12 6058955 Exonic hg19 NA BQ016904 Out-of-frame Inter-chr p12.1 p13.31 124487 ChimerSeq ChiTaRs ChiTaRs MALAT1-MLH1 MALAT1 chr11 65272209 MLH1 chr3 37055982 Exonic hg19 NA BG945974 Out-of-frame Inter-chr q13.1 p22.2 Oncogene Tumor suppressor gene 124488 ChimerSeq ChiTaRs ChiTaRs SPHK1-EP300 SPHK1 chr17 74383932 EP300 chr22 41574556 Exonic hg19 NA BF915954 Out-of-frame Inter-chr q25.1 q13.2 Oncogene 124489 ChimerSeq ChiTaRs ChiTaRs ARNT2-ARNT2 ARNT2 chr15 80889890 ARNT2 chr15 80889884 Exonic hg19 NA BG403104 Out-of-frame Intra-chr q25.1 Transcription factor q25.1 Transcription factor 124490 ChimerSeq ChiTaRs ChiTaRs RASL10A-RASL10A RASL10A chr22 29709497 RASL10A chr22 29709009 Exonic hg19 NA AI880234 Out-of-frame Intra-chr q12.2 Tumor suppressor gene q12.2 Tumor suppressor gene 124491 ChimerSeq ChiTaRs ChiTaRs CABP1-CABP1 CABP1 chr12 121093391 CABP1 chr12 121084521 Exonic hg19 NA BF946534 Out-of-frame Intra-chr q24.31 q24.31 124492 ChimerSeq ChiTaRs ChiTaRs CBFB-MRPL42 CBFB chr16 67068103 MRPL42 chr12 93881377 Exonic hg19 NA BU742854 Out-of-frame Inter-chr q22.1 q22 124493 ChimerSeq ChiTaRs ChiTaRs DOT1L-COL6A1 DOT1L chr19 2220134 COL6A1 chr21 47420007 Exonic hg19 NA BF850194 Out-of-frame Inter-chr p13.3 Oncogene Transcription factor q22.3 124494 ChimerSeq ChiTaRs ChiTaRs COG4-COG4 COG4 chr16 70557453 COG4 chr16 70551537 Exonic hg19 NA BP378464 Out-of-frame Intra-chr q22.1 q22.1 124495 ChimerSeq ChiTaRs ChiTaRs MALAT1-RAB5B MALAT1 chr11 65268631 RAB5B chr12 56386888 Exonic hg19 NA BF960724 Out-of-frame Inter-chr q13.1 q13.2 124496 ChimerSeq ChiTaRs ChiTaRs KRT4-KRT4 KRT4 chr12 53200516 KRT4 chr12 53200521 Exonic hg19 NA BI850664 Out-of-frame Intra-chr q13.13 q13.13 124497 ChimerSeq ChiTaRs ChiTaRs CHD3-NARS CHD3 chr17 7802429 NARS chr18 55270116 Exonic hg19 NA AW380044 Out-of-frame Inter-chr p13.1 q21.31 124498 ChimerSeq ChiTaRs ChiTaRs ABHD12-MEG3 ABHD12 chr20 25288669 MEG3 chr14 101321300 Exonic hg19 NA BI055484 Out-of-frame Inter-chr p11.21 q32.2 Tumor suppressor gene 124499 ChimerSeq ChiTaRs ChiTaRs POLE-ADM POLE chr12 133209317 ADM chr11 10328411 Exonic hg19 NA BG986284 Out-of-frame Inter-chr q24.33 p15.4 124500 ChimerSeq ChiTaRs ChiTaRs NDRG2-DDIT4 NDRG2 chr14 21487891 DDIT4 chr10 74035024 Exonic hg19 NA BF930964 Out-of-frame Inter-chr q11.2 Tumor suppressor gene q22.1 124501 ChimerSeq ChiTaRs ChiTaRs MALAT1-LIFR MALAT1 chr11 65272307 LIFR chr5 38529748 Exonic hg19 NA BG434574 Out-of-frame Inter-chr q13.1 p13.1 Oncogene Tumor suppressor gene 124502 ChimerSeq ChiTaRs ChiTaRs C21orf33-CAPNS1 C21orf33 chr21 45557448 CAPNS1 chr19 36640734 Exonic hg19 NA BG742214 Out-of-frame Inter-chr q22.3 q13.12 124503 ChimerSeq ChiTaRs ChiTaRs UBE2V1-PRKAG1 UBE2V1 chr20 48729690 PRKAG1 chr12 49396060 Exonic hg19 NA BU588474 Out-of-frame Inter-chr q13.13 q13.12 124504 ChimerSeq ChiTaRs ChiTaRs BBS1-GFAP BBS1 chr11 66300373 GFAP chr17 42992429 Exonic hg19 NA BQ345014 Out-of-frame Inter-chr q13.2 q21.31 124505 ChimerSeq ChiTaRs ChiTaRs VPS13C-PSPC1 VPS13C chr15 62205969 PSPC1 chr13 20289396 Exonic hg19 NA AW392964 Out-of-frame Inter-chr q22.2 q12.11 124506 ChimerSeq ChiTaRs ChiTaRs CTTN-CSF2RB CTTN chr11 70255207 CSF2RB chr22 37335284 Exonic hg19 NA BF848074 Out-of-frame Inter-chr q13.3 q12.3 124507 ChimerSeq ChiTaRs ChiTaRs FTL-SFPQ FTL chr19 49468839 SFPQ chr1 35655919 Exonic hg19 NA AW239284 Out-of-frame Inter-chr q13.33 p34.3 124508 ChimerSeq ChiTaRs ChiTaRs NDRG2-NDRG2 NDRG2 chr14 21485111 NDRG2 chr14 21484922 Exonic hg19 NA BG819284 Out-of-frame Intra-chr q11.2 Tumor suppressor gene q11.2 Tumor suppressor gene 124509 ChimerSeq ChiTaRs ChiTaRs RPL21-AHNAK RPL21 chr13 27830700 AHNAK chr11 62293445 Exonic hg19 NA AW084964 Out-of-frame Inter-chr q12.2 q12.3 Tumor suppressor gene 124510 ChimerSeq ChiTaRs ChiTaRs PPP4R1-PPP4R1 PPP4R1 chr18 9547255 PPP4R1 chr18 9547387 Exonic hg19 NA BQ774924 Out-of-frame Intra-chr p11.22 p11.22 124511 ChimerSeq ChiTaRs ChiTaRs PPP6R2-PPP6R2 PPP6R2 chr22 50882820 PPP6R2 chr22 50876603 Exonic hg19 NA BU684564 Out-of-frame Intra-chr q13.33 q13.33 124512 ChimerSeq ChiTaRs ChiTaRs MLL-UGT1A8 MLL chr11 118367743 UGT1A8 chr2 234629380 Exonic hg19 NA BQ233134 Out-of-frame Inter-chr q23.3 q37.1 124513 ChimerSeq ChiTaRs ChiTaRs OXA1L-OXA1L OXA1L chr14 23239488 OXA1L chr14 23237169 Exonic hg19 NA BG763334 Out-of-frame Intra-chr q11.2 q11.2 124514 ChimerSeq ChiTaRs ChiTaRs UBE2Z-EPS15 UBE2Z chr17 47003395 EPS15 chr1 51908703 Exonic hg19 NA BU930424 Out-of-frame Inter-chr q21.32 p32.3 124515 ChimerSeq ChiTaRs ChiTaRs UBA52-VPS28 UBA52 chr19 18685935 VPS28 chr8 145649000 Exonic hg19 NA BG482364 Out-of-frame Inter-chr p13.11 q24.3 124516 ChimerSeq ChiTaRs ChiTaRs PC-PC PC chr11 66617473 PC chr11 66617080 Exonic hg19 NA BF891034 Out-of-frame Intra-chr q13.2 q13.2 124517 ChimerSeq ChiTaRs ChiTaRs NF1-FAM160B1 NF1 chr17 29599358 FAM160B1 chr10 116622571 Exonic hg19 NA BU609204 Out-of-frame Inter-chr q11.2 Oncogene Tumor suppressor gene q25.3 124518 ChimerSeq ChiTaRs ChiTaRs C20orf112-ORMDL3 C20orf112 chr20 31031763 ORMDL3 chr17 38078246 Exonic hg19 NA AW391904 Out-of-frame Inter-chr q21.1 124519 ChimerSeq ChiTaRs ChiTaRs RNF213-SLC37A1 RNF213 chr17 78237067 SLC37A1 chr21 43967165 Exonic hg19 NA BG978634 Out-of-frame Inter-chr q25.3 Oncogene q22.3 124520 ChimerSeq ChiTaRs ChiTaRs C11orf80-TARDBP C11orf80 chr11 66611314 TARDBP chr1 11076598 Exonic hg19 NA AW168514 Out-of-frame Inter-chr q13.2 p36.22 124521 ChimerSeq ChiTaRs ChiTaRs COPS7A-COPS7A COPS7A chr12 6841508 COPS7A chr12 6840672 Exonic hg19 NA BQ010784 Out-of-frame Intra-chr p13.31 p13.31 124522 ChimerSeq ChiTaRs ChiTaRs IL4I1-IL4I1 IL4I1 chr19 50413465 IL4I1 chr19 50413146 Exonic hg19 NA BF819394 Out-of-frame Intra-chr q13.33 q13.33 124523 ChimerSeq ChiTaRs ChiTaRs FUS-LTBP3 FUS chr16 31196504 LTBP3 chr11 65320336 Exonic hg19 NA AW304984 Out-of-frame Inter-chr p11.2 Tumor suppressor gene q13.1 124524 ChimerSeq ChiTaRs ChiTaRs GPRC5C-GPRC5C GPRC5C chr17 72438164 GPRC5C chr17 72437395 Exonic hg19 NA BU581664 Out-of-frame Intra-chr q25.1 q25.1 124525 ChimerSeq ChiTaRs ChiTaRs DLAT-DLAT DLAT chr11 111933924 DLAT chr11 111933916 Exonic hg19 NA AL079484 Out-of-frame Intra-chr q23.1 q23.1 124526 ChimerSeq ChiTaRs ChiTaRs MORF4L1-RAB21 MORF4L1 chr15 79190513 RAB21 chr12 72179939 Exonic hg19 NA BQ430384 Out-of-frame Inter-chr q25.1 q21.1 124527 ChimerSeq ChiTaRs ChiTaRs CLIP1-CLIP1 CLIP1 chr12 122845776 CLIP1 chr12 122848404 Exonic hg19 NA BF997764 Out-of-frame Intra-chr q24.31 q24.31 124528 ChimerSeq ChiTaRs ChiTaRs DLGAP4-DLGAP4 DLGAP4 chr20 35094901 DLGAP4 chr20 35091761 Exonic hg19 NA AK024674 Out-of-frame Intra-chr q11.23 q11.23 124529 ChimerSeq ChiTaRs ChiTaRs HMGA2-HMGA2 HMGA2 chr12 66359918 HMGA2 chr12 66359879 Exonic hg19 NA BG281704 Out-of-frame Intra-chr q14.3 Transcription factor q14.3 Transcription factor 124530 ChimerSeq ChiTaRs ChiTaRs FARP1-FARP1 FARP1 chr13 98895336 FARP1 chr13 98894950 Exonic hg19 NA BF886774 Out-of-frame Intra-chr q32.2 q32.2 124531 ChimerSeq ChiTaRs ChiTaRs BPTF-ARHGAP26 BPTF chr17 65979636 ARHGAP26 chr5 142544888 Exonic hg19 NA AW609214 Out-of-frame Inter-chr q24.2 Transcription factor q31.3 124532 ChimerSeq ChiTaRs ChiTaRs GRN-GRN GRN chr17 42429755 GRN chr17 42428929 Exonic hg19 NA BF869014 Out-of-frame Intra-chr q21.31 q21.31 124533 ChimerSeq ChiTaRs ChiTaRs EEF2-EEF2 EEF2 chr19 3976608 EEF2 chr19 3984135 Exonic hg19 NA BF927334 Out-of-frame Intra-chr p13.3 p13.3 124534 ChimerSeq ChiTaRs ChiTaRs COG3-AGA COG3 chr13 46109519 AGA chr4 178356963 Exonic hg19 NA AI904994 Out-of-frame Inter-chr q14.13 q34.3 124535 ChimerSeq ChiTaRs ChiTaRs DYNC1H1-TMPRSS6 DYNC1H1 chr14 102510374 TMPRSS6 chr22 37468135 Exonic hg19 NA BF951674 Out-of-frame Inter-chr q32.31 q12.3 Tumor suppressor gene 124536 ChimerSeq ChiTaRs ChiTaRs FUS-ACTN4 FUS chr16 31202925 ACTN4 chr19 39219644 Exonic hg19 NA AI983764 Out-of-frame Inter-chr p11.2 Tumor suppressor gene 124537 ChimerSeq ChiTaRs ChiTaRs ATP8B4-ATP8B4 ATP8B4 chr15 50192768 ATP8B4 chr15 50192236 Exonic hg19 NA BF898394 Out-of-frame Intra-chr q21.2 q21.2 124538 ChimerSeq ChiTaRs ChiTaRs PIEZO1-WDR4 PIEZO1 chr16 88801421 WDR4 chr21 44285403 Exonic hg19 NA BF772274 Out-of-frame Inter-chr q24.3 q22.3 124539 ChimerSeq ChiTaRs ChiTaRs EPB41L1-FIP1L1 EPB41L1 chr20 34820721 FIP1L1 chr4 54319225 Exonic hg19 NA BU607884 3'UTR-CDS Inter-chr q11.23 q12 124540 ChimerSeq ChiTaRs ChiTaRs CLASRP-ENO2 CLASRP chr19 45557933 ENO2 chr12 7030826 Exonic hg19 NA BQ302654 Out-of-frame Inter-chr q13.32 p13.31 124541 ChimerSeq ChiTaRs ChiTaRs PRKCB-CHRNA4 PRKCB chr16 24175367 CHRNA4 chr20 61993559 Exonic hg19 NA AW804554 Out-of-frame Inter-chr p12.2 Tumor suppressor gene q13.33 124542 ChimerSeq ChiTaRs ChiTaRs COG7-ACO2 COG7 chr16 23434797 ACO2 chr22 41919719 Exonic hg19 NA BI000114 Out-of-frame Inter-chr p12.2 q13.2 124543 ChimerSeq ChiTaRs ChiTaRs PPP6R2-INTS3 PPP6R2 chr22 50881699 INTS3 chr1 153736331 Exonic hg19 NA BQ352794 Out-of-frame Inter-chr q13.33 q21.3 124544 ChimerSeq ChiTaRs ChiTaRs PICK1-PICK1 PICK1 chr22 38465656 PICK1 chr22 38465710 Exonic hg19 NA BF798784 Out-of-frame Intra-chr q13.1 q13.1 124545 ChimerSeq ChiTaRs ChiTaRs COQ9-PLEKHG1 COQ9 chr16 57494826 PLEKHG1 chr6 151125831 Exonic hg19 NA BG955804 Out-of-frame Inter-chr q21 q25.1 124546 ChimerSeq ChiTaRs ChiTaRs ERO1L-ERO1L ERO1L chr14 53138547 ERO1L chr14 53124635 Exonic hg19 NA BG288814 Out-of-frame Intra-chr 124547 ChimerSeq ChiTaRs ChiTaRs CACNA1C-RHOB CACNA1C chr12 2296124 RHOB chr2 20648631 Exonic hg19 NA BF993074 Out-of-frame Inter-chr p13.33 p24.1 Tumor suppressor gene 124548 ChimerSeq ChiTaRs ChiTaRs MYBPC1-MYBPC1 MYBPC1 chr12 102040619 MYBPC1 chr12 102053549 Exonic hg19 NA AW377754 Out-of-frame Intra-chr q23.2 q23.2 124549 ChimerSeq ChiTaRs ChiTaRs ENO2-TNRC18 ENO2 chr12 7031553 TNRC18 chr7 5399156 Exonic hg19 NA BQ316184 Out-of-frame Inter-chr p13.31 p22.1 124550 ChimerSeq ChiTaRs ChiTaRs CCND2-CCND2 CCND2 chr12 4411619 CCND2 chr12 4413044 Exonic hg19 NA BG953354 Out-of-frame Intra-chr p13.32 Oncogene p13.32 Oncogene 124551 ChimerSeq ChiTaRs ChiTaRs SYTL2-SYTL2 SYTL2 chr11 85468734 SYTL2 chr11 85468942 Exonic hg19 NA BG952264 Out-of-frame Intra-chr q14.1 q14.1 124552 ChimerSeq ChiTaRs ChiTaRs ECH1-ECH1 ECH1 chr19 39307135 ECH1 chr19 39306105 Exonic hg19 NA BF911244 Out-of-frame Intra-chr 124553 ChimerSeq ChiTaRs ChiTaRs KLC1-KLC1 KLC1 chr14 104145884 KLC1 chr14 104136518 Exonic hg19 NA BF950914 Out-of-frame Intra-chr q32.33 q32.33 124554 ChimerSeq ChiTaRs ChiTaRs GSTP1-WHSC1 GSTP1 chr11 67353878 WHSC1 chr4 1962760 Exonic hg19 NA AW390894 Out-of-frame Inter-chr q13.2 Tumor suppressor gene Oncogene 124555 ChimerSeq ChiTaRs ChiTaRs DLK1-MED4 DLK1 chr14 101200727 MED4 chr13 48656249 Exonic hg19 NA BU073434 Out-of-frame Inter-chr q32.2 Tumor suppressor gene q14.2 124556 ChimerSeq ChiTaRs ChiTaRs PAN3-PAN3 PAN3 chr13 28736439 PAN3 chr13 28715406 Exonic hg19 NA AL699794 Out-of-frame Intra-chr q12.2 q12.2 124557 ChimerSeq ChiTaRs ChiTaRs EIF4A1-EIF4A1 EIF4A1 chr17 7480805 EIF4A1 chr17 7476144 Exonic hg19 NA AU119214 CDS-5'UTR Intra-chr p13.1 p13.1 124558 ChimerSeq ChiTaRs ChiTaRs LGALS4-ARHGEF10L LGALS4 chr19 39292540 ARHGEF10L chr1 17908981 Exonic hg19 NA BG980034 Out-of-frame Inter-chr p36.13 124559 ChimerSeq ChiTaRs ChiTaRs GIT1-CYB5D2 GIT1 chr17 27900900 CYB5D2 chr17 4058358 Exonic hg19 NA AW007184 Out-of-frame Intra-chr q11.2 p13.2 124560 ChimerSeq ChiTaRs ChiTaRs DGCR2-GRN DGCR2 chr22 19035819 GRN chr17 42430150 Exonic hg19 NA BQ335954 Out-of-frame Inter-chr q11.21 q21.31 124561 ChimerSeq ChiTaRs ChiTaRs ATP5D-RPSA ATP5D chr19 1244824 RPSA chr19 24009910 Exonic hg19 NA BC009974 3'UTR-5'UTR Intra-chr p13.3 p22.1 124562 ChimerSeq ChiTaRs ChiTaRs PCCA-PCCA PCCA chr13 100818455 PCCA chr13 100820153 Exonic hg19 NA BE071684 Out-of-frame Intra-chr q32.3 q32.3 124563 ChimerSeq ChiTaRs ChiTaRs DUT-TPT1 DUT chr15 48634615 TPT1 chr13 45913712 Exonic hg19 NA BM090964 Out-of-frame Inter-chr q21.1 q14.13 124564 ChimerSeq ChiTaRs ChiTaRs PRR14L-H1FX PRR14L chr22 32077545 H1FX chr3 129033614 Exonic hg19 NA BF750874 Out-of-frame Inter-chr q12.2 q21.3 124565 ChimerSeq ChiTaRs ChiTaRs COL4A1-COL4A1 COL4A1 chr13 110801502 COL4A1 chr13 110801717 Exonic hg19 NA W58624 Out-of-frame Intra-chr q34 q34 124566 ChimerSeq ChiTaRs ChiTaRs ANKRD11-ANKRD11 ANKRD11 chr16 89384869 ANKRD11 chr16 89384601 Exonic hg19 NA CV342044 Out-of-frame Intra-chr q24.3 q24.3 124567 ChimerSeq ChiTaRs ChiTaRs ARL17A-NUAK1 ARL17A chr17 637233 NUAK1 chr12 106491888 Exonic hg19 NA BF356134 Out-of-frame Inter-chr q21.31 q23.3 Tumor suppressor gene 124568 ChimerSeq ChiTaRs ChiTaRs CACNG8-TRIM41 CACNG8 chr19 54468204 TRIM41 chr5 180661885 Exonic hg19 NA BF343834 Out-of-frame Inter-chr q13.42 q35.3 124569 ChimerSeq ChiTaRs ChiTaRs POU2F2-POU2F2 POU2F2 chr19 42599741 POU2F2 chr19 42596386 Exonic hg19 NA BM423804 Out-of-frame Intra-chr q13.2 Transcription factor q13.2 Transcription factor 124570 ChimerSeq ChiTaRs ChiTaRs BAZ2A-CSDE1 BAZ2A chr12 56992252 CSDE1 chr1 115260703 Exonic hg19 NA AW973544 Out-of-frame Inter-chr q13.3 Transcription factor p13.2 124571 ChimerSeq ChiTaRs ChiTaRs AP2B1-POLR2A AP2B1 chr17 33953833 POLR2A chr17 7403972 Exonic hg19 NA BI022194 Out-of-frame Intra-chr q12 p13.1 124572 ChimerSeq ChiTaRs ChiTaRs RAB40C-LOC100506469 RAB40C chr16 677468 LOC100506469 chr19 36036635 Exonic hg19 NA BC064904 Out-of-frame Inter-chr p13.3 124573 ChimerSeq ChiTaRs ChiTaRs RSRC2-RSRC2 RSRC2 chr12 123001850 RSRC2 chr12 122989894 Exonic hg19 NA CA314484 Out-of-frame Intra-chr q24.31 q24.31 124574 ChimerSeq ChiTaRs ChiTaRs SLC35E4-PIK3CD SLC35E4 chr22 31033308 PIK3CD chr1 9738491 Exonic hg19 NA BE181134 Out-of-frame Inter-chr q12.2 p36.22 Oncogene 124575 ChimerSeq ChiTaRs ChiTaRs OPA3-CCDC61 OPA3 chr19 46088036 CCDC61 chr19 46519952 Exonic hg19 NA DB456774 Out-of-frame Intra-chr q13.32 q13.32 124576 ChimerSeq ChiTaRs ChiTaRs NRXN3-KDM3B NRXN3 chr14 79784488 KDM3B chr5 137722794 Exonic hg19 NA BE927664 Out-of-frame Inter-chr q24.3 q31.2 Tumor suppressor gene 124577 ChimerSeq ChiTaRs ChiTaRs CNOT1-ENTPD4 CNOT1 chr16 58589764 ENTPD4 chr8 23299520 Exonic hg19 NA BE932194 Out-of-frame Inter-chr q21 p21.3 124578 ChimerSeq ChiTaRs ChiTaRs SYNRG-ADAR SYNRG chr17 35896889 ADAR chr1 154556452 Exonic hg19 NA BE709734 Out-of-frame Inter-chr q21.3 124579 ChimerSeq ChiTaRs ChiTaRs EPN2-EPN2 EPN2 chr17 19162445 EPN2 chr17 19162449 Exonic hg19 NA BF351514 Out-of-frame Intra-chr p11.2 p11.2 124580 ChimerSeq ChiTaRs ChiTaRs APH1B-APH1B APH1B chr15 63575486 APH1B chr15 63573273 Exonic hg19 NA BF510174 Out-of-frame Intra-chr q22.2 q22.2 124581 ChimerSeq ChiTaRs ChiTaRs ATP2A2-CDK18 ATP2A2 chr12 110724569 CDK18 chr1 205476934 Exonic hg19 NA AW818544 Out-of-frame Inter-chr q24.11 q32.1 124582 ChimerSeq ChiTaRs ChiTaRs SRSF2-SRSF2 SRSF2 chr17 74731081 SRSF2 chr17 74731036 Exonic hg19 NA CB250684 Out-of-frame Intra-chr q25.1 Oncogene q25.1 Oncogene 124583 ChimerSeq ChiTaRs ChiTaRs FAM98B-PER2 FAM98B chr15 38777063 PER2 chr2 239173954 Exonic hg19 NA BF508504 3'UTR-CDS Inter-chr q14 q37.3 Tumor suppressor gene 124584 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65272267 MALAT1 chr11 65271883 Exonic hg19 NA BF084924 Out-of-frame Intra-chr q13.1 q13.1 124585 ChimerSeq ChiTaRs ChiTaRs TCAM1P-MIR205HG TCAM1P chr17 61938437 MIR205HG chr1 209603476 Exonic hg19 NA BM987104 Out-of-frame Inter-chr q23.3 q32.2 124586 ChimerSeq ChiTaRs ChiTaRs RPAP1-IGF2 RPAP1 chr15 41829399 IGF2 chr11 2160299 Exonic hg19 NA BE299934 5'UTR-5'UTR Inter-chr q15.1 p15.5 Oncogene 124587 ChimerSeq ChiTaRs ChiTaRs FGD4-VPS13D FGD4 chr12 32798982 VPS13D chr1 12481664 Exonic hg19 NA DB304604 Out-of-frame Inter-chr p11.21 p36.22 Seq+ 124588 ChimerSeq ChiTaRs ChiTaRs MALAT1-MIR548H3 MALAT1 chr11 65266781 MIR548H3 chr6 97685730 Exonic hg19 NA BE702364 Out-of-frame Inter-chr q13.1 p12 124589 ChimerSeq ChiTaRs ChiTaRs MYBPC1-SLC22A11 MYBPC1 chr12 102079588 SLC22A11 chr11 64338677 Exonic hg19 NA R16914 Out-of-frame Inter-chr q23.2 q13.1 124590 ChimerSeq ChiTaRs ChiTaRs ME3-TPT1 ME3 chr11 86230311 TPT1 chr13 45911455 Exonic hg19 NA BE844054 Out-of-frame Inter-chr q14.2 q14.13 124591 ChimerSeq ChiTaRs ChiTaRs RAI1-SQLE RAI1 chr17 17624486 SQLE chr8 126021415 Exonic hg19 NA BE183534 Out-of-frame Inter-chr p11.2 q24.13 124592 ChimerSeq ChiTaRs ChiTaRs CACNB3-CACNB3 CACNB3 chr12 49222194 CACNB3 chr12 49222449 Exonic hg19 NA CB156174 Out-of-frame Intra-chr q13.12 q13.12 124593 ChimerSeq ChiTaRs ChiTaRs CNPY2-CNPY2 CNPY2 chr12 56705195 CNPY2 chr12 56704305 Exonic hg19 NA BE826144 Out-of-frame Intra-chr q13.3 q13.3 124594 ChimerSeq ChiTaRs ChiTaRs NRXN2-ABL1 NRXN2 chr11 64374578 ABL1 chr9 133717160 Exonic hg19 NA BM932194 Out-of-frame Inter-chr q13.1 q34.12 TK:Abl Oncogene 124595 ChimerSeq ChiTaRs ChiTaRs ARMC6-ARMC6 ARMC6 chr19 19168976 ARMC6 chr19 19168300 Exonic hg19 NA CB156824 Out-of-frame Intra-chr p13.11 p13.11 124596 ChimerSeq ChiTaRs ChiTaRs FBN1-ARHGAP17 FBN1 chr15 48702417 ARHGAP17 chr16 24946832 Exonic hg19 NA CA435104 Out-of-frame Inter-chr q21.1 p12.1 124597 ChimerSeq ChiTaRs ChiTaRs MLLT1-MLLT1 MLLT1 chr19 6212409 MLLT1 chr19 6211237 Exonic hg19 NA BC023524 Out-of-frame Intra-chr p13.3 p13.3 124598 ChimerSeq ChiTaRs ChiTaRs SF3B2-PTPN22 SF3B2 chr11 65836358 PTPN22 chr1 114382132 Exonic hg19 NA BI021484 Out-of-frame Inter-chr q13.1 p13.2 124599 ChimerSeq ChiTaRs ChiTaRs CFL2-NOSTRIN CFL2 chr14 35180290 NOSTRIN chr2 169672980 Exonic hg19 NA BX102624 Out-of-frame Inter-chr q13.1 124600 ChimerSeq ChiTaRs ChiTaRs KCTD21-KCTD21 KCTD21 chr11 77882659 KCTD21 chr11 77882298 Exonic hg19 NA BX114694 Out-of-frame Intra-chr q14.1 q14.1 124601 ChimerSeq ChiTaRs ChiTaRs ZC3H13-ZC3H13 ZC3H13 chr13 46531263 ZC3H13 chr13 46542104 Exonic hg19 NA DA779164 Out-of-frame Intra-chr q14.13 q14.13 124602 ChimerSeq ChiTaRs ChiTaRs MARS-EIF3L MARS chr12 57883326 EIF3L chr22 38245441 Exonic hg19 NA BC001814 Out-of-frame Inter-chr q13.3 q13.1 124603 ChimerSeq ChiTaRs ChiTaRs BPTF-EPB41L2 BPTF chr17 65871021 EPB41L2 chr6 131241456 Exonic hg19 NA BX956924 Out-of-frame Inter-chr q24.2 Transcription factor q23.2 124604 ChimerSeq ChiTaRs ChiTaRs UBE2S-IDI2-AS1 UBE2S chr19 55919358 IDI2-AS1 chr10 1087194 Exonic hg19 NA CX762634 Out-of-frame Inter-chr q13.42 p15.3 124605 ChimerSeq ChiTaRs ChiTaRs ZMYND8-SLC39A14 ZMYND8 chr20 45976927 SLC39A14 chr8 22262207 Exonic hg19 NA DA093734 Out-of-frame Inter-chr q13.12 p21.3 124606 ChimerSeq ChiTaRs ChiTaRs CCNF-CCNF CCNF chr16 2507169 CCNF chr16 2506824 Exonic hg19 NA CF137274 Out-of-frame Intra-chr p13.3 p13.3 124607 ChimerSeq ChiTaRs ChiTaRs SNAP25-SNAP25 SNAP25 chr20 10287786 SNAP25 chr20 10279945 Exonic hg19 NA CD250904 Out-of-frame Intra-chr p12.2 p12.2 124608 ChimerSeq ChiTaRs ChiTaRs ZZEF1-ZZEF1 ZZEF1 chr17 3961392 ZZEF1 chr17 3961406 Exonic hg19 NA BF734724 Out-of-frame Intra-chr p13.2 p13.2 124609 ChimerSeq ChiTaRs ChiTaRs LGALS3-LGALS3 LGALS3 chr14 55612128 LGALS3 chr14 55611961 Exonic hg19 NA CN479124 Out-of-frame Intra-chr q22.3 q22.3 124610 ChimerSeq ChiTaRs ChiTaRs FBXL3-C20orf27 FBXL3 chr13 77600644 C20orf27 chr20 3734178 Exonic hg19 NA BF591154 Out-of-frame Inter-chr q22.3 p13 124611 ChimerSeq ChiTaRs ChiTaRs DCAF4-DCAF4 DCAF4 chr14 73406306 DCAF4 chr14 73412080 Exonic hg19 NA BE502134 Out-of-frame Intra-chr q24.2 q24.2 124612 ChimerSeq ChiTaRs ChiTaRs LRP5-LRP5 LRP5 chr11 68216426 LRP5 chr11 68213918 Exonic hg19 NA R06144 Out-of-frame Intra-chr q13.2 q13.2 124613 ChimerSeq ChiTaRs ChiTaRs CAPNS1-SF1 CAPNS1 chr19 36640766 SF1 chr11 64533288 Exonic hg19 NA BI857044 Out-of-frame Inter-chr q13.12 q13.1 124614 ChimerSeq ChiTaRs ChiTaRs RBBP6-ETNK1 RBBP6 chr16 24556026 ETNK1 chr12 22784348 Exonic hg19 NA CV420024 Out-of-frame Inter-chr p12.1 p12.1 124615 ChimerSeq ChiTaRs ChiTaRs TAGLN-TAGLN TAGLN chr11 117074601 TAGLN chr11 117074569 Exonic hg19 NA BF733934 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene 124616 ChimerSeq ChiTaRs ChiTaRs CADM1-TIMM9 CADM1 chr11 115303450 TIMM9 chr14 58889951 Exonic hg19 NA BM722144 Out-of-frame Inter-chr q23.3 Tumor suppressor gene q23.1 124617 ChimerSeq ChiTaRs ChiTaRs BTG3-FHL1 BTG3 chr21 18966569 FHL1 chrX 135292509 Exonic hg19 NA BF092514 Out-of-frame Inter-chr Tumor suppressor gene q26.3 Tumor suppressor gene 124618 ChimerSeq ChiTaRs ChiTaRs SMTN-SMTN SMTN chr22 31491422 SMTN chr22 31491419 Exonic hg19 NA W22074 Out-of-frame Intra-chr q12.2 q12.2 124619 ChimerSeq ChiTaRs ChiTaRs RPL28-C22orf23 RPL28 chr19 55899410 C22orf23 chr22 38340103 Exonic hg19 NA DB253394 Out-of-frame Inter-chr q13.42 q13.1 124620 ChimerSeq ChiTaRs ChiTaRs STARD13-STARD13 STARD13 chr13 33764231 STARD13 chr13 33764235 Exonic hg19 NA BI042494 Out-of-frame Intra-chr q13.1 Tumor suppressor gene q13.1 Tumor suppressor gene 124621 ChimerSeq ChiTaRs ChiTaRs TSC22D1-MIR548O2 TSC22D1 chr13 45008137 MIR548O2 chr8 29921291 Exonic hg19 NA BE176674 Out-of-frame Inter-chr q14.11 Tumor suppressor gene Transcription factor q11.23 124622 ChimerSeq ChiTaRs ChiTaRs RBBP8-STK24 RBBP8 chr18 20572940 STK24 chr13 99210430 Exonic hg19 NA BF327624 Out-of-frame Inter-chr q11.2 Tumor suppressor gene q32.2 124623 ChimerSeq ChiTaRs ChiTaRs B2M-SOGA1 B2M chr15 45010224 SOGA1 chr20 35406272 Exonic hg19 NA BP235524 Out-of-frame Inter-chr Oncogene q11.23 124624 ChimerSeq ChiTaRs ChiTaRs NELL2-UBR7 NELL2 chr12 44917837 UBR7 chr14 93684889 Exonic hg19 NA BE696424 Out-of-frame Inter-chr q12 124625 ChimerSeq ChiTaRs ChiTaRs CHRFAM7A-CRLF2 CHRFAM7A chr15 30686023 CRLF2 chrY 1332347 Exonic hg19 NA BC062414 Out-of-frame Inter-chr p22.33 Oncogene 124626 ChimerSeq ChiTaRs ChiTaRs STAT2-HSPA5 STAT2 chr12 56740320 HSPA5 chr9 128000896 Exonic hg19 NA CV335734 Out-of-frame Inter-chr q13.3 Transcription factor q33.3 124627 ChimerSeq ChiTaRs ChiTaRs COL1A1-ARNT COL1A1 chr17 48262840 ARNT chr1 150789322 Exonic hg19 NA CA422154 Out-of-frame Inter-chr q21.33 Oncogene q21.3 Oncogene Transcription factor 124628 ChimerSeq ChiTaRs ChiTaRs TPM1-HOPX TPM1 chr15 63363855 HOPX chr4 57515477 Exonic hg19 NA AW950454 Out-of-frame Inter-chr q22.2 q12 Tumor suppressor gene 124629 ChimerSeq ChiTaRs ChiTaRs NEDD4L-NEDD4L NEDD4L chr18 55764349 NEDD4L chr18 55765219 Exonic hg19 NA BM976134 Out-of-frame Intra-chr q21.31 Tumor suppressor gene q21.31 Tumor suppressor gene 124630 ChimerSeq ChiTaRs ChiTaRs TPCN2-SMCR7L TPCN2 chr11 68823859 SMCR7L chr22 39896505 Exonic hg19 NA DB522164 Out-of-frame Inter-chr q13.3 124631 ChimerSeq ChiTaRs ChiTaRs FOXK2-CAD FOXK2 chr17 80559716 CAD chr2 27459622 Exonic hg19 NA BF765434 Out-of-frame Inter-chr q25.3 Transcription factor p23.3 124632 ChimerSeq ChiTaRs ChiTaRs PKIG-PKIG PKIG chr20 43247669 PKIG chr20 43247471 Exonic hg19 NA AW974374 Out-of-frame Intra-chr q13.12 q13.12 124633 ChimerSeq ChiTaRs ChiTaRs FBN3-FBN3 FBN3 chr19 8130867 FBN3 chr19 8130286 Exonic hg19 NA BX113164 Out-of-frame Intra-chr p13.2 p13.2 124634 ChimerSeq ChiTaRs ChiTaRs CALM1-CALM1 CALM1 chr14 90874031 CALM1 chr14 90874240 Exonic hg19 NA W26114 Out-of-frame Intra-chr q32.11 q32.11 124635 ChimerSeq ChiTaRs ChiTaRs HAGHL-SLC38A10 HAGHL chr16 779715 SLC38A10 chr17 79220415 Exonic hg19 NA DB345864 3'UTR-3'UTR Inter-chr p13.3 q25.3 124636 ChimerSeq ChiTaRs ChiTaRs SLTM-SLTM SLTM chr15 59221421 SLTM chr15 59219746 Exonic hg19 NA AW835604 Out-of-frame Intra-chr q22.1 q22.1 124637 ChimerSeq ChiTaRs ChiTaRs RPRD1A-RPRD1A RPRD1A chr18 33599256 RPRD1A chr18 33597124 Exonic hg19 NA DB343204 Out-of-frame Intra-chr q12.2 q12.2 124638 ChimerSeq ChiTaRs ChiTaRs C16orf82-DEF6 C16orf82 chr16 27078735 DEF6 chr6 35286540 Exonic hg19 NA DB025124 Out-of-frame Inter-chr p12.1 p21.31 124639 ChimerSeq ChiTaRs ChiTaRs GTF2H3-GTF2H3 GTF2H3 chr12 124144440 GTF2H3 chr12 124132508 Exonic hg19 NA BI021254 Out-of-frame Intra-chr q24.31 q24.31 124640 ChimerSeq ChiTaRs ChiTaRs CGNL1-GPR173 CGNL1 chr15 57730418 GPR173 chrX 53106643 Exonic hg19 NA DA235294 Out-of-frame Inter-chr q21.3 p11.22 124641 ChimerSeq ChiTaRs ChiTaRs ARHGAP35-RERE ARHGAP35 chr19 47507753 RERE chr1 8761748 Exonic hg19 NA BE466544 Out-of-frame Inter-chr q13.32 Transcription factor p36.23 124642 ChimerSeq ChiTaRs ChiTaRs BAD-BAD BAD chr11 64037752 BAD chr11 64037375 Exonic hg19 NA AW883934 Out-of-frame Intra-chr q13.1 q13.1 124643 ChimerSeq ChiTaRs ChiTaRs FKBP4-NARS FKBP4 chr12 2912740 NARS chr18 55274765 Exonic hg19 NA AW993534 Out-of-frame Inter-chr p13.33 q21.31 124644 ChimerSeq ChiTaRs ChiTaRs CALM1-ABI2 CALM1 chr14 90871164 ABI2 chr2 204234068 Exonic hg19 NA CF891084 Out-of-frame Inter-chr q32.11 q33.2 Tumor suppressor gene 124645 ChimerSeq ChiTaRs ChiTaRs DAAM1-DAAM1 DAAM1 chr14 59757410 DAAM1 chr14 59757383 Exonic hg19 NA BF748744 Out-of-frame Intra-chr q23.1 q23.1 124646 ChimerSeq ChiTaRs ChiTaRs FBRSL1-FAT1 FBRSL1 chr12 133093143 FAT1 chr4 187509698 Exonic hg19 NA AW900184 Out-of-frame Inter-chr q24.33 q35.2 Tumor suppressor gene 124647 ChimerSeq ChiTaRs ChiTaRs TM9SF4-TM9SF4 TM9SF4 chr20 30747908 TM9SF4 chr20 30749140 Exonic hg19 NA W22794 Out-of-frame Intra-chr q11.21 q11.21 124648 ChimerSeq ChiTaRs ChiTaRs SYMPK-MAPK6 SYMPK chr19 46351263 MAPK6 chr15 52311447 Exonic hg19 NA L77964 Out-of-frame Inter-chr q13.32 q21.2 124649 ChimerSeq ChiTaRs ChiTaRs ZNF429-ZNF429 ZNF429 chr19 21690020 ZNF429 chr19 21690569 Exonic hg19 NA H47694 Out-of-frame Intra-chr p12 Transcription factor p12 Transcription factor 124650 ChimerSeq ChiTaRs ChiTaRs RPL19-KRT13 RPL19 chr17 37360848 KRT13 chr17 39657240 Exonic hg19 NA BE720744 Out-of-frame Intra-chr q12 q21.2 124651 ChimerSeq ChiTaRs ChiTaRs NLK-NLK NLK chr17 26518127 NLK chr17 26518092 Exonic hg19 NA BM450424 Out-of-frame Intra-chr q11.2 CMGC:MAPK q11.2 CMGC:MAPK 124652 ChimerSeq ChiTaRs ChiTaRs PRICKLE1-SORBS1 PRICKLE1 chr12 42902820 SORBS1 chr10 97154906 Exonic hg19 NA BF365814 Out-of-frame Inter-chr q12 Tumor suppressor gene q24.1 124653 ChimerSeq ChiTaRs ChiTaRs MFSD12-MFSD12 MFSD12 chr19 3544555 MFSD12 chr19 3544894 Exonic hg19 NA CB529014 Out-of-frame Intra-chr p13.3 p13.3 124654 ChimerSeq ChiTaRs ChiTaRs MNT-SPRED1 MNT chr17 2291922 SPRED1 chr15 38646176 Exonic hg19 NA BX108504 Out-of-frame Inter-chr p13.3 Tumor suppressor gene Transcription factor q14 124655 ChimerSeq ChiTaRs ChiTaRs NCF4-NCF4 NCF4 chr22 37257188 NCF4 chr22 37257155 Exonic hg19 NA X77094 Out-of-frame Intra-chr 124656 ChimerSeq ChiTaRs ChiTaRs LHFP-PLEKHA2 LHFP chr13 39917249 PLEKHA2 chr8 38831104 Exonic hg19 NA BM719554 Out-of-frame Inter-chr q14.11 p11.22 124657 ChimerSeq ChiTaRs ChiTaRs TAOK3-DLL3 TAOK3 chr12 118684728 DLL3 chr19 39989616 Exonic hg19 NA BC035504 Out-of-frame Inter-chr q24.23 q13.2 124658 ChimerSeq ChiTaRs ChiTaRs SERPINA3-SERPINA3 SERPINA3 chr14 95090271 SERPINA3 chr14 95090096 Exonic hg19 NA BF326784 Out-of-frame Intra-chr q32.13 q32.13 124659 ChimerSeq ChiTaRs ChiTaRs ZNF28-CPSF6 ZNF28 chr19 53317697 CPSF6 chr12 69652039 Exonic hg19 NA BM970434 Out-of-frame Inter-chr q13.41 Transcription factor q15 124660 ChimerSeq ChiTaRs ChiTaRs NCAM1-CALM3 NCAM1 chr11 113094887 CALM3 chr19 47111512 Exonic hg19 NA T05484 Out-of-frame Inter-chr q23.2 q13.32 124661 ChimerSeq ChiTaRs ChiTaRs BRF1-IFT88 BRF1 chr14 105717161 IFT88 chr13 21237445 Exonic hg19 NA BE837644 Out-of-frame Inter-chr q32.33 Tumor suppressor gene q12.11 Tumor suppressor gene 124662 ChimerSeq ChiTaRs ChiTaRs C15orf63-CREB3L4 C15orf63 chr15 44094066 CREB3L4 chr1 153946178 Exonic hg19 NA BF476334 Out-of-frame Inter-chr q21.3 Transcription factor 124663 ChimerSeq ChiTaRs ChiTaRs PRNP-ACTN4 PRNP chr20 4680282 ACTN4 chr19 39217593 Exonic hg19 NA BI039284 Out-of-frame Inter-chr p13 124664 ChimerSeq ChiTaRs ChiTaRs TRAPPC10-TRAPPC10 TRAPPC10 chr21 45496345 TRAPPC10 chr21 45496282 Exonic hg19 NA W52034 Out-of-frame Intra-chr q22.3 q22.3 124665 ChimerSeq ChiTaRs ChiTaRs BTG1-BTG1 BTG1 chr12 92537779 BTG1 chr12 92537778 Exonic hg19 NA CN478804 Out-of-frame Intra-chr q21.33 q21.33 124666 ChimerSeq ChiTaRs ChiTaRs UBAP1L-UBAP1L UBAP1L chr15 65385496 UBAP1L chr15 65385096 Exonic hg19 NA BC065824 Out-of-frame Intra-chr q22.31 q22.31 124667 ChimerSeq ChiTaRs ChiTaRs ZNF83-EXOC3L2 ZNF83 chr19 53138407 EXOC3L2 chr19 45719330 Exonic hg19 NA BE735144 5'UTR-CDS Intra-chr q13.41 Transcription factor q13.32 124668 ChimerSeq ChiTaRs ChiTaRs RPL38-UBE2J2 RPL38 chr17 72206017 UBE2J2 chr1 1189857 Exonic hg19 NA DB371044 Out-of-frame Inter-chr q25.1 p36.33 124669 ChimerSeq ChiTaRs ChiTaRs PI4KA-WIPI2 PI4KA chr22 21174121 WIPI2 chr7 5266433 Exonic hg19 NA BI059304 Out-of-frame Inter-chr q11.21 p22.1 124670 ChimerSeq ChiTaRs ChiTaRs C17orf76-AS1-SEZ6 C17orf76-AS1 chr17 16344713 SEZ6 chr17 27308424 Exonic hg19 NA DA530744 Out-of-frame Intra-chr q11.2 Tumor suppressor gene 124671 ChimerSeq ChiTaRs ChiTaRs GPR108-GPR108 GPR108 chr19 6731087 GPR108 chr19 6735705 Exonic hg19 NA CD368414 Out-of-frame Intra-chr p13.3 p13.3 124672 ChimerSeq ChiTaRs ChiTaRs FBXL20-FBXL20 FBXL20 chr17 37546423 FBXL20 chr17 37545736 Exonic hg19 NA AW850234 Out-of-frame Intra-chr q12 q12 124673 ChimerSeq ChiTaRs ChiTaRs TCF25-TCF25 TCF25 chr16 89973381 TCF25 chr16 89971351 Exonic hg19 NA BX507104 Out-of-frame Intra-chr q24.3 q24.3 124674 ChimerSeq ChiTaRs ChiTaRs IDH3A-IDH3A IDH3A chr15 78461713 IDH3A chr15 78461692 Exonic hg19 NA BE887604 Out-of-frame Intra-chr q25.1 q25.1 124675 ChimerSeq ChiTaRs ChiTaRs ETV6-GRIA2 ETV6 chr12 11993595 GRIA2 chr4 158195362 Exonic hg19 NA BF748464 Out-of-frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q32.1 124676 ChimerSeq ChiTaRs ChiTaRs CDH3-RRM2 CDH3 chr16 68679282 RRM2 chr2 10263171 Exonic hg19 NA DB124334 Out-of-frame Inter-chr q22.1 p25.1 124677 ChimerSeq ChiTaRs ChiTaRs MYBPC1-SLC22A11 MYBPC1 chr12 102079581 SLC22A11 chr11 64338597 Exonic hg19 NA R93384 Out-of-frame Inter-chr q23.2 q13.1 124678 ChimerSeq ChiTaRs ChiTaRs LOC339685-COCH LOC339685 chr22 47769448 COCH chr14 31358652 Exonic hg19 NA DB044184 Out-of-frame Inter-chr q12 124679 ChimerSeq ChiTaRs ChiTaRs RBFOX2-MED16 RBFOX2 chr22 36137340 MED16 chr19 876403 Exonic hg19 NA BF766064 Out-of-frame Inter-chr p13.3 124680 ChimerSeq ChiTaRs ChiTaRs MAP2K7-MAP2K7 MAP2K7 chr19 7974313 MAP2K7 chr19 7969905 Exonic hg19 NA DA497564 Out-of-frame Intra-chr p13.2 STE:STE7 p13.2 STE:STE7 124681 ChimerSeq ChiTaRs ChiTaRs VPS4A-LGMN VPS4A chr16 69358908 LGMN chr14 93170154 Exonic hg19 NA BC008004 Out-of-frame Inter-chr q22.1 q32.12 124682 ChimerSeq ChiTaRs ChiTaRs C16orf72-HSPA8 C16orf72 chr16 9208138 HSPA8 chr11 122929390 Exonic hg19 NA CV322984 Out-of-frame Inter-chr p13.2 q24.1 124683 ChimerSeq ChiTaRs ChiTaRs HERC1-FAM96A HERC1 chr15 64126116 FAM96A chr15 64364766 Exonic hg19 NA BC017384 Out-of-frame Intra-chr q22.31 q22.31 124684 ChimerSeq ChiTaRs ChiTaRs HM13-PNPLA2 HM13 chr20 30157173 PNPLA2 chr11 825028 Exonic hg19 NA BU960554 Out-of-frame Inter-chr q11.21 p15.5 124685 ChimerSeq ChiTaRs ChiTaRs CREBBP-KAT6A CREBBP chr16 3907404 KAT6A chr8 41793857 Exonic hg19 NA AY442918 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene p11.21 Oncogene KB Pub 124686 ChimerSeq ChiTaRs ChiTaRs TMEM136-ATP11C TMEM136 chr11 120197341 ATP11C chrX 138823165 Exonic hg19 NA BE179504 Out-of-frame Inter-chr q23.3 q27.1 124687 ChimerSeq ChiTaRs ChiTaRs METTL4-RPS14 METTL4 chr18 2542574 RPS14 chr5 149823801 Exonic hg19 NA CN271804 Out-of-frame Inter-chr p11.32 q33.1 124688 ChimerSeq ChiTaRs ChiTaRs LENG8-LENG8 LENG8 chr19 54970078 LENG8 chr19 54970857 Exonic hg19 NA BF091044 Out-of-frame Intra-chr 124689 ChimerSeq ChiTaRs ChiTaRs MARK2-MARK2 MARK2 chr11 63676700 MARK2 chr11 63636327 Exonic hg19 NA BE090074 Out-of-frame Intra-chr q13.1 CAMK:CAMKL q13.1 CAMK:CAMKL 124690 ChimerSeq ChiTaRs ChiTaRs LOC100507217-IPO9 LOC100507217 chr15 93440678 IPO9 chr1 201845468 Exonic hg19 NA BE698674 Out-of-frame Inter-chr q32.1 124691 ChimerSeq ChiTaRs ChiTaRs VRK3-VRK3 VRK3 chr19 50488436 VRK3 chr19 50489774 Exonic hg19 NA BE161074 Out-of-frame Intra-chr q13.33 CK1:VRK q13.33 CK1:VRK 124692 ChimerSeq ChiTaRs ChiTaRs SEPT9-THBS1 2009_ 9_ 1_ chr17 75401887 THBS1 chr15 39883533 Exonic hg19 NA BE818194 Out-of-frame Inter-chr q14 Oncogene Tumor suppressor gene 124693 ChimerSeq ChiTaRs ChiTaRs MLL-CDC42SE2 MLL chr11 118358098 CDC42SE2 chr5 130611266 Exonic hg19 NA AY839737 Out-of-frame Inter-chr q23.3 q31.1 124694 ChimerSeq ChiTaRs ChiTaRs FECH-C1orf185 FECH chr18 55253897 C1orf185 chr1 51604493 Exonic hg19 NA CN278494 Out-of-frame Inter-chr q21.31 p32.3 124695 ChimerSeq ChiTaRs ChiTaRs RABEP1-EIF4G1 RABEP1 chr17 5281981 EIF4G1 chr3 184039462 Exonic hg19 NA BE466214 Out-of-frame Inter-chr p13.2 q27.1 124696 ChimerSeq ChiTaRs ChiTaRs AXIN2-CFDP1 AXIN2 chr17 63525235 CFDP1 chr16 75338927 Exonic hg19 NA BE502564 Out-of-frame Inter-chr q24.1 Tumor suppressor gene q23.1 124697 ChimerSeq ChiTaRs ChiTaRs SUGP2-SUGP2 SUGP2 chr19 19135695 SUGP2 chr19 19120678 Exonic hg19 NA BI051154 Out-of-frame Intra-chr p13.11 p13.11 124698 ChimerSeq ChiTaRs ChiTaRs THOC6-PCBP2 THOC6 chr16 3076752 PCBP2 chr12 53867597 Exonic hg19 NA BF757284 Out-of-frame Inter-chr p13.3 q13.13 124699 ChimerSeq ChiTaRs ChiTaRs LAMA3-LAMA3 LAMA3 chr18 21500988 LAMA3 chr18 21494461 Exonic hg19 NA AW853574 Out-of-frame Intra-chr q11.2 q11.2 124700 ChimerSeq ChiTaRs ChiTaRs HIPK4-MAP1A HIPK4 chr19 40886656 MAP1A chr15 43814570 Exonic hg19 NA M62294 Out-of-frame Inter-chr q13.2 CMGC:DYRK q15.3 124701 ChimerSeq ChiTaRs ChiTaRs SERPINA1-RPL23 SERPINA1 chr14 94844909 RPL23 chr17 37006381 Exonic hg19 NA CB147374 Out-of-frame Inter-chr q32.13 q12 124702 ChimerSeq ChiTaRs ChiTaRs CCNB1IP1-RASGRF2 CCNB1IP1 chr14 20781812 RASGRF2 chr5 80523995 Exonic hg19 NA BP242964 Out-of-frame Inter-chr q11.2 q14.1 124703 ChimerSeq ChiTaRs ChiTaRs CBS-CBS CBS chr21 44478343 CBS chr21 44474020 Exonic hg19 NA L25464 Out-of-frame Intra-chr q22.3 q22.3 124704 ChimerSeq ChiTaRs ChiTaRs CDK4-ARV1 CDK4 chr12 58142401 ARV1 chr1 231133738 Exonic hg19 NA CN296904 Out-of-frame Inter-chr q14.1 CMGC:CDK Oncogene q42.2 124705 ChimerSeq ChiTaRs ChiTaRs MALAT1-ZFAND5 MALAT1 chr11 65270209 ZFAND5 chr9 74970741 Exonic hg19 NA BE814884 Out-of-frame Inter-chr q13.1 q21.13 124706 ChimerSeq ChiTaRs ChiTaRs HSD11B2-SLC39A1 HSD11B2 chr16 67465408 SLC39A1 chr1 153933100 Exonic hg19 NA CB960424 Out-of-frame Inter-chr q22.1 q21.3 Tumor suppressor gene 124707 ChimerSeq ChiTaRs ChiTaRs MYO5B-PPP1R8 MYO5B chr18 47587355 PPP1R8 chr1 28158085 Exonic hg19 NA M78404 Out-of-frame Inter-chr q21.1 p35.3 124708 ChimerSeq ChiTaRs ChiTaRs CYTH1-CYTH1 CYTH1 chr17 76671504 CYTH1 chr17 76675317 Exonic hg19 NA BI012134 Out-of-frame Intra-chr q25.3 q25.3 124709 ChimerSeq ChiTaRs ChiTaRs TSPAN3-TSPAN3 TSPAN3 chr15 77338538 TSPAN3 chr15 77338490 Exonic hg19 NA CB242294 Out-of-frame Intra-chr q24.3 q24.3 124710 ChimerSeq ChiTaRs ChiTaRs ABCC1-LSP1 ABCC1 chr16 16199303 LSP1 chr11 1913018 Exonic hg19 NA BI024764 Out-of-frame Inter-chr p15.5 124711 ChimerSeq ChiTaRs ChiTaRs PPFIBP1-AKAP13 PPFIBP1 chr12 27794621 AKAP13 chr15 86260519 Exonic hg19 NA U03634 Out-of-frame Inter-chr p11.23 q25.3 124712 ChimerSeq ChiTaRs ChiTaRs NFKBIA-RFC5 NFKBIA chr14 35872395 RFC5 chr12 118468375 Exonic hg19 NA AW820294 Out-of-frame Inter-chr q13.2 q24.23 124713 ChimerSeq ChiTaRs ChiTaRs KIF16B-ABHD2 KIF16B chr20 16458841 ABHD2 chr15 89743704 Exonic hg19 NA DA875914 Out-of-frame Inter-chr p12.1 q26.1 124714 ChimerSeq ChiTaRs ChiTaRs EID2-EID2 EID2 chr19 40030638 EID2 chr19 40029456 Exonic hg19 NA BC071854 Out-of-frame Intra-chr q13.2 q13.2 124715 ChimerSeq ChiTaRs ChiTaRs RBCK1-ATHL1 RBCK1 chr20 389279 ATHL1 chr11 291483 Exonic hg19 NA DB146434 Out-of-frame Inter-chr p13 Transcription factor 124716 ChimerSeq ChiTaRs ChiTaRs BSG-BSG BSG chr19 583487 BSG chr19 582859 Exonic hg19 NA CA422684 Out-of-frame Intra-chr p13.3 p13.3 124717 ChimerSeq ChiTaRs ChiTaRs B4GALNT3-TMTC1 B4GALNT3 chr12 584954 TMTC1 chr12 29805128 Exonic hg19 NA BE070244 Out-of-frame Intra-chr p13.33 p11.22 124718 ChimerSeq ChiTaRs ChiTaRs CKAP4-COL1A1 CKAP4 chr12 106632937 COL1A1 chr17 48262655 Exonic hg19 NA CN302144 Out-of-frame Inter-chr q23.3 q21.33 Oncogene 124719 ChimerSeq ChiTaRs ChiTaRs HSP90B1-HSP90B1 HSP90B1 chr12 104341515 HSP90B1 chr12 104331492 Exonic hg19 NA W27444 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene 124720 ChimerSeq ChiTaRs ChiTaRs JUP-JUP JUP chr17 39780827 JUP chr17 39779907 Exonic hg19 NA DA459744 Out-of-frame Intra-chr q21.2 Tumor suppressor gene q21.2 Tumor suppressor gene 124721 ChimerSeq ChiTaRs ChiTaRs GLS2-GLS2 GLS2 chr12 56880346 GLS2 chr12 56876296 Exonic hg19 NA AW894954 Out-of-frame Intra-chr q13.3 Tumor suppressor gene q13.3 Tumor suppressor gene 124722 ChimerSeq ChiTaRs ChiTaRs RAB34-RAB34 RAB34 chr17 27041505 RAB34 chr17 27041307 Exonic hg19 NA BM700264 Out-of-frame Intra-chr q11.2 q11.2 124723 ChimerSeq ChiTaRs ChiTaRs TNRC6B-TNRC6B TNRC6B chr22 40658672 TNRC6B chr22 40642470 Exonic hg19 NA BC078164 Out-of-frame Intra-chr q13.1 q13.1 124724 ChimerSeq ChiTaRs ChiTaRs TGM2-DAG1 TGM2 chr20 36760149 DAG1 chr3 49571177 Exonic hg19 NA BI058794 Out-of-frame Inter-chr q11.23 p21.31 124725 ChimerSeq ChiTaRs ChiTaRs SMG6-TNRC6A SMG6 chr17 2203379 TNRC6A chr16 24802394 Exonic hg19 NA BF733944 Out-of-frame Inter-chr p13.3 p12.1 124726 ChimerSeq ChiTaRs ChiTaRs CRADD-S100A8 CRADD chr12 94243534 S100A8 chr1 153362508 Exonic hg19 NA BM975074 Out-of-frame Inter-chr q22 q21.3 124727 ChimerSeq ChiTaRs ChiTaRs BTBD11-HDLBP BTBD11 chr12 107890738 HDLBP chr2 242229102 Exonic hg19 NA BI027304 Out-of-frame Inter-chr q23.3 q37.3 124728 ChimerSeq ChiTaRs ChiTaRs C20orf112-RUNX1 C20orf112 chr20 31108719 RUNX1 chr21 36164665 Exonic hg19 NA GU070943 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor 124729 ChimerSeq ChiTaRs ChiTaRs BAZ2A-CKAP5 BAZ2A chr12 56995496 CKAP5 chr11 46799749 Exonic hg19 NA BI049504 Out-of-frame Inter-chr q13.3 Transcription factor p11.2 124730 ChimerSeq ChiTaRs ChiTaRs ITPKA-ITPKA ITPKA chr15 41788899 ITPKA chr15 41788907 Exonic hg19 NA BE175234 Out-of-frame Intra-chr q15.1 q15.1 124731 ChimerSeq ChiTaRs ChiTaRs SMOX-URM1 SMOX chr20 4168367 URM1 chr9 131133640 Exonic hg19 NA BC019054 Out-of-frame Inter-chr p13 q34.11 124732 ChimerSeq ChiTaRs ChiTaRs SF3B3-ERBB2IP SF3B3 chr16 70606084 ERBB2IP chr5 65308125 Exonic hg19 NA BE819094 Out-of-frame Inter-chr q22.1 124733 ChimerSeq ChiTaRs ChiTaRs THOP1-THOP1 THOP1 chr19 2807845 THOP1 chr19 2807865 Exonic hg19 NA CN274744 Out-of-frame Intra-chr p13.3 p13.3 124734 ChimerSeq ChiTaRs ChiTaRs UBTF-SEC61A1 UBTF chr17 42286084 SEC61A1 chr3 127789422 Exonic hg19 NA BE835544 Out-of-frame Inter-chr q21.31 q21.3 124735 ChimerSeq ChiTaRs ChiTaRs MIR639-ASTN2 MIR639 chr19 14675669 ASTN2 chr9 119942924 Exonic hg19 NA CD048524 Out-of-frame Inter-chr p13.12 q33.1 124736 ChimerSeq ChiTaRs ChiTaRs MRC2-GNA12 MRC2 chr17 60746734 GNA12 chr7 2820595 Exonic hg19 NA BF675674 Out-of-frame Inter-chr q23.2 p22.2 124737 ChimerSeq ChiTaRs ChiTaRs BMP2-BMP2 BMP2 chr20 6759799 BMP2 chr20 6759533 Exonic hg19 NA CB306884 Out-of-frame Intra-chr p12.3 Tumor suppressor gene p12.3 Tumor suppressor gene 124738 ChimerSeq ChiTaRs ChiTaRs ACTG1-TMSB10 ACTG1 chr17 79478526 TMSB10 chr2 85133698 Exonic hg19 NA BI869344 Out-of-frame Inter-chr q25.3 p11.2 124739 ChimerSeq ChiTaRs ChiTaRs CMIP-SSBP1 CMIP chr16 81745191 SSBP1 chr7 141438215 Exonic hg19 NA CB240854 Out-of-frame Inter-chr q23.2 124740 ChimerSeq ChiTaRs ChiTaRs GNS-ESRP1 GNS chr12 65138375 ESRP1 chr8 95718809 Exonic hg19 NA BE708454 Out-of-frame Inter-chr q14.3 q22.1 Tumor suppressor gene 124741 ChimerSeq ChiTaRs ChiTaRs GABRG3-CEP350 GABRG3 chr15 27406407 CEP350 chr1 180044155 Exonic hg19 NA DB067484 Out-of-frame Inter-chr q12 q25.2 124742 ChimerSeq ChiTaRs ChiTaRs PRKD2-PITX1 PRKD2 chr19 47207863 PITX1 chr5 134364863 Exonic hg19 NA BE839314 Out-of-frame Inter-chr q13.32 q31.1 Transcription factor 124743 ChimerSeq ChiTaRs ChiTaRs SP1-SP1 SP1 chr12 53810082 SP1 chr12 53775446 Exonic hg19 NA CN359274 Out-of-frame Intra-chr q13.13 Transcription factor q13.13 Transcription factor 124744 ChimerSeq ChiTaRs ChiTaRs BPIFB1-AGAP1 BPIFB1 chr20 31887764 AGAP1 chr2 236540181 Exonic hg19 NA BE933124 Out-of-frame Inter-chr q11.21 q37.2 124745 ChimerSeq ChiTaRs ChiTaRs TRABD-TRABD TRABD chr22 50636567 TRABD chr22 50636563 Exonic hg19 NA BF205124 Out-of-frame Intra-chr q13.33 q13.33 124746 ChimerSeq ChiTaRs ChiTaRs KIF1C-KLK4 KIF1C chr17 4905402 KLK4 chr19 51410114 Exonic hg19 NA BI020974 Out-of-frame Inter-chr p13.2 q13.41 124747 ChimerSeq ChiTaRs ChiTaRs CANT1-CANT1 CANT1 chr17 76988997 CANT1 chr17 76989012 Exonic hg19 NA BE816214 Out-of-frame Intra-chr q25.3 q25.3 124748 ChimerSeq ChiTaRs ChiTaRs BLOC1S1-BLOC1S1 BLOC1S1 chr12 56113488 BLOC1S1 chr12 56113321 Exonic hg19 NA BF221814 Out-of-frame Intra-chr q13.2 q13.2 124749 ChimerSeq ChiTaRs ChiTaRs PVR-TANC1 PVR chr19 45166849 TANC1 chr2 159955813 Exonic hg19 NA BE551934 Out-of-frame Inter-chr q13.31 q24.2 124750 ChimerSeq ChiTaRs ChiTaRs DPP9-DPP9 DPP9 chr19 4702129 DPP9 chr19 4702618 Exonic hg19 NA BM453854 Out-of-frame Intra-chr p13.3 p13.3 124751 ChimerSeq ChiTaRs ChiTaRs ZNRF1-ELMO1 ZNRF1 chr16 75045492 ELMO1 chr7 37478306 Exonic hg19 NA AW834784 Out-of-frame Inter-chr q23.1 p14.1 124752 ChimerSeq ChiTaRs ChiTaRs CIC-BOLA2 CIC chr19 42799163 BOLA2 chr16 29999653 Exonic hg19 NA CD580494 Out-of-frame Inter-chr q13.2 Oncogene Tumor suppressor gene Transcription factor p11.2 124753 ChimerSeq ChiTaRs ChiTaRs SEC23A-SNRNP200 SEC23A chr14 39560356 SNRNP200 chr2 96965108 Exonic hg19 NA D44754 Out-of-frame Inter-chr q21.1 q11.2 124754 ChimerSeq ChiTaRs ChiTaRs IFNAR1-USP22 IFNAR1 chr21 34727892 USP22 chr17 20903808 Exonic hg19 NA BE530994 Out-of-frame Inter-chr q22.11 p11.2 124755 ChimerSeq ChiTaRs ChiTaRs ZNF700-TYK2 ZNF700 chr19 12043326 TYK2 chr19 10461662 Exonic hg19 NA R16584 Out-of-frame Intra-chr p13.2 Transcription factor p13.2 TK:JakA 124756 ChimerSeq ChiTaRs ChiTaRs SCG3-ITGB3 SCG3 chr15 51973975 ITGB3 chr17 45381930 Exonic hg19 NA T11184 Out-of-frame Inter-chr q21.2 q21.32 Oncogene Tumor suppressor gene 124757 ChimerSeq ChiTaRs ChiTaRs BAHD1-BAHD1 BAHD1 chr15 40759258 BAHD1 chr15 40759233 Exonic hg19 NA F13194 Out-of-frame Intra-chr q15.1 q15.1 124758 ChimerSeq ChiTaRs ChiTaRs AKAP13-SUPT3H AKAP13 chr15 86120746 SUPT3H chr6 44942014 Exonic hg19 NA BX104484 Out-of-frame Inter-chr q25.3 p21.1 124759 ChimerSeq ChiTaRs ChiTaRs FTL-FTL FTL chr19 49469921 FTL chr19 49468654 Exonic hg19 NA CX758834 Out-of-frame Intra-chr q13.33 q13.33 124760 ChimerSeq ChiTaRs ChiTaRs SCPEP1-SCPEP1 SCPEP1 chr17 55074496 SCPEP1 chr17 55075288 Exonic hg19 NA BF508804 Out-of-frame Intra-chr q22 q22 124761 ChimerSeq ChiTaRs ChiTaRs KHNYN-SEC13 KHNYN chr14 24908820 SEC13 chr3 10343009 Exonic hg19 NA BE161424 Out-of-frame Inter-chr q12 p25.3 124762 ChimerSeq ChiTaRs ChiTaRs UBA52-ACTG1 UBA52 chr19 18686253 ACTG1 chr17 79476997 Exonic hg19 NA BC019044 Out-of-frame Inter-chr p13.11 q25.3 124763 ChimerSeq ChiTaRs ChiTaRs CREBBP-KAT6A CREBBP chr16 3927559 KAT6A chr8 41793018 Exonic hg19 NA AJ315151 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene p11.21 Oncogene KB Pub 124764 ChimerSeq ChiTaRs ChiTaRs RNF213-RNF213 RNF213 chr17 78362491 RNF213 chr17 78367285 Exonic hg19 NA BE074544 Out-of-frame Intra-chr q25.3 Oncogene q25.3 Oncogene 124765 ChimerSeq ChiTaRs ChiTaRs HDGFRP2-SETD4 HDGFRP2 chr19 4502317 SETD4 chr21 37411447 Exonic hg19 NA R53594 Out-of-frame Inter-chr q22.12 124766 ChimerSeq ChiTaRs ChiTaRs NLGN2-NLGN2 NLGN2 chr17 7322777 NLGN2 chr17 7322585 Exonic hg19 NA AW884444 Out-of-frame Intra-chr 124767 ChimerSeq ChiTaRs ChiTaRs TNRC6B-CDH2 TNRC6B chr22 40580300 CDH2 chr18 25531924 Exonic hg19 NA AW899304 Out-of-frame Inter-chr q13.1 q12.1 Oncogene 124768 ChimerSeq ChiTaRs ChiTaRs BLMH-SLC2A1 BLMH chr17 28576174 SLC2A1 chr1 43406768 Exonic hg19 NA BE828104 Out-of-frame Inter-chr q11.2 p34.2 124769 ChimerSeq ChiTaRs ChiTaRs TTC7B-TTC7B TTC7B chr14 91059855 TTC7B chr14 91006932 Exonic hg19 NA BM718654 Out-of-frame Intra-chr q32.11 q32.11 124770 ChimerSeq ChiTaRs ChiTaRs ATP6V1E1-IL1RN ATP6V1E1 chr22 18081056 IL1RN chr2 113890591 Exonic hg19 NA BF378274 Out-of-frame Inter-chr q11.21 q14.1 124771 ChimerSeq ChiTaRs ChiTaRs DLAT-SPTB DLAT chr11 111896352 SPTB chr14 65318966 Exonic hg19 NA H49884 Out-of-frame Inter-chr q23.1 q23.3 124772 ChimerSeq ChiTaRs ChiTaRs MLL2-MLL2 MLL2 chr12 49446765 MLL2 chr12 49446073 Exonic hg19 NA BI026654 Out-of-frame Intra-chr 124773 ChimerSeq ChiTaRs ChiTaRs TP53BP1-CLEC18A TP53BP1 chr15 43748577 CLEC18A chr16 70195784 Exonic hg19 NA BE179774 Out-of-frame Inter-chr q15.3 Tumor suppressor gene q22.1 124774 ChimerSeq ChiTaRs ChiTaRs NEAT1-SF1 NEAT1 chr11 65191295 SF1 chr11 64543506 Exonic hg19 NA BX095574 Out-of-frame Intra-chr q13.1 q13.1 124775 ChimerSeq ChiTaRs ChiTaRs DOT1L-COL6A1 DOT1L chr19 2220127 COL6A1 chr21 47419956 Exonic hg19 NA CV336274 Out-of-frame Inter-chr p13.3 Oncogene Transcription factor q22.3 124776 ChimerSeq ChiTaRs ChiTaRs NPIPB7-GNAI2 NPIPB7 chr16 28512693 GNAI2 chr3 50281808 Exonic hg19 NA BI031334 Out-of-frame Inter-chr p12.1 p21.31 124777 ChimerSeq ChiTaRs ChiTaRs CKAP4-CKAP4 CKAP4 chr12 106632864 CKAP4 chr12 106633335 Exonic hg19 NA BE715024 Out-of-frame Intra-chr q23.3 q23.3 124778 ChimerSeq ChiTaRs ChiTaRs CNOT1-RNU5E-1 CNOT1 chr16 58633674 RNU5E-1 chr5 80546433 Exonic hg19 NA DA382194 Out-of-frame Inter-chr q21 p36.22 124779 ChimerSeq ChiTaRs ChiTaRs SCN4A-SCN4A SCN4A chr17 62043501 SCN4A chr17 62049791 Exonic hg19 NA CD608184 Out-of-frame Intra-chr q23.3 q23.3 124780 ChimerSeq ChiTaRs ChiTaRs UTP18-UTP18 UTP18 chr17 49346267 UTP18 chr17 49340634 Exonic hg19 NA BI059294 Out-of-frame Intra-chr q21.33 q21.33 124781 ChimerSeq ChiTaRs ChiTaRs CIRBP-AS1-PKNOX1 CIRBP-AS1 chr19 1271411 PKNOX1 chr21 44450156 Exonic hg19 NA DA500684 Out-of-frame Inter-chr p13.3 q22.3 Tumor suppressor gene 124782 ChimerSeq ChiTaRs ChiTaRs DAZAP2-DPP10 DAZAP2 chr12 51637101 DPP10 chr2 115271193 Exonic hg19 NA AW904644 Out-of-frame Inter-chr q13.13 q14.1 124783 ChimerSeq ChiTaRs ChiTaRs MTL5-HOOK1 MTL5 chr11 68509745 HOOK1 chr1 60284005 Exonic hg19 NA BF380154 Out-of-frame Inter-chr p32.1 124784 ChimerSeq ChiTaRs ChiTaRs OSBPL2-CELSR1 OSBPL2 chr20 60851481 CELSR1 chr22 46898945 Exonic hg19 NA CV352764 Out-of-frame Inter-chr q13.33 q13.31 124785 ChimerSeq ChiTaRs ChiTaRs FAM19A5-KLC1 FAM19A5 chr22 49146635 KLC1 chr14 104159169 Exonic hg19 NA DA128534 Out-of-frame Inter-chr q13.32 q32.33 124786 ChimerSeq ChiTaRs ChiTaRs OPCML-NRD1 OPCML chr11 132383306 NRD1 chr1 52280372 Exonic hg19 NA DB056744 Out-of-frame Inter-chr q25 Tumor suppressor gene 124787 ChimerSeq ChiTaRs ChiTaRs ZNF207-PHC1 ZNF207 chr17 30696363 PHC1 chr12 9074658 Exonic hg19 NA CX785974 Out-of-frame Inter-chr q11.2 Transcription factor p13.31 124788 ChimerSeq ChiTaRs ChiTaRs CD276-TSPAN15 CD276 chr15 74002348 TSPAN15 chr10 71211269 Exonic hg19 NA AY358934 Out-of-frame Inter-chr q24.1 q22.1 124789 ChimerSeq ChiTaRs ChiTaRs AP3S2-ANK2 AP3S2 chr15 90415631 ANK2 chr4 113976558 Exonic hg19 NA T57754 Out-of-frame Inter-chr q26.1 q25 124790 ChimerSeq ChiTaRs ChiTaRs STARD9-LRRC8D STARD9 chr15 42984346 LRRC8D chr1 90351451 Exonic hg19 NA BF370574 Out-of-frame Inter-chr q15.2 p22.2 124791 ChimerSeq ChiTaRs ChiTaRs OAZ1-ULK2 OAZ1 chr19 2269743 ULK2 chr17 19750068 Exonic hg19 NA DB259274 Out-of-frame Inter-chr p13.3 p11.2 Other:ULK 124792 ChimerSeq ChiTaRs ChiTaRs CHD2-CHD2 CHD2 chr15 93545548 CHD2 chr15 93540185 Exonic hg19 NA BI035224 Out-of-frame Intra-chr q26.1 q26.1 124793 ChimerSeq ChiTaRs ChiTaRs FITM2-YTHDC1 FITM2 chr20 42936077 YTHDC1 chr4 33926 Exonic hg19 NA BE708434 Out-of-frame Inter-chr q13.12 124794 ChimerSeq ChiTaRs ChiTaRs GCN1L1-TXNL4A GCN1L1 chr12 120576206 TXNL4A chr18 77733513 Exonic hg19 NA BC080184 Out-of-frame Inter-chr q23 124795 ChimerSeq ChiTaRs ChiTaRs AP1G1-WDR70 AP1G1 chr16 71840432 WDR70 chr5 37393027 Exonic hg19 NA AW853054 Out-of-frame Inter-chr q22.2 p13.2 124796 ChimerSeq ChiTaRs ChiTaRs MLL-ANKHD1-EIF4EBP3 MLL chr11 118355991 ANKHD1-EIF4EBP3 chr5 139921271 Exonic hg19 NA AY839734 Out-of-frame Inter-chr q23.3 q31.3 124797 ChimerSeq ChiTaRs ChiTaRs SLCO4A1-GCDH SLCO4A1 chr20 61303310 GCDH chr19 13004443 Exonic hg19 NA BF761104 Out-of-frame Inter-chr q13.33 p13.13 124798 ChimerSeq ChiTaRs ChiTaRs CYP19A1-CRK CYP19A1 chr15 51503011 CRK chr17 1325042 Exonic hg19 NA BF085024 Out-of-frame Inter-chr q21.2 p13.3 124799 ChimerSeq ChiTaRs ChiTaRs DENND5B-BCL7B DENND5B chr12 31603069 BCL7B chr7 72954436 Exonic hg19 NA DA376084 Out-of-frame Inter-chr p11.21 q11.23 124800 ChimerSeq ChiTaRs ChiTaRs PSMC4-PSMC4 PSMC4 chr19 40486052 PSMC4 chr19 40477072 Exonic hg19 NA CV361424 CDS-5'UTR Intra-chr 124801 ChimerSeq ChiTaRs ChiTaRs RPL23-CD164 RPL23 chr17 37009982 CD164 chr6 109689728 Exonic hg19 NA DA438824 Out-of-frame Inter-chr q12 q21 124802 ChimerSeq ChiTaRs ChiTaRs STUB1-STUB1 STUB1 chr16 732608 STUB1 chr16 732584 Exonic hg19 NA BE327094 Out-of-frame Intra-chr p13.3 Tumor suppressor gene p13.3 Tumor suppressor gene 124803 ChimerSeq ChiTaRs ChiTaRs NPLOC4-ANTXR2 NPLOC4 chr17 79563223 ANTXR2 chr4 80885507 Exonic hg19 NA BI020354 Out-of-frame Inter-chr q25.3 q21.21 124804 ChimerSeq ChiTaRs ChiTaRs PRNP-PRNP PRNP chr20 4682234 PRNP chr20 4682029 Exonic hg19 NA CA312794 3'UTR-3'UTR Intra-chr p13 p13 124805 ChimerSeq ChiTaRs ChiTaRs PMP22-PMP22 PMP22 chr17 15133528 PMP22 chr17 15133521 Exonic hg19 NA BX381404 Out-of-frame Intra-chr p12 p12 124806 ChimerSeq ChiTaRs ChiTaRs TBC1D4-TBC1D4 TBC1D4 chr13 75971279 TBC1D4 chr13 75971288 Exonic hg19 NA AW992944 Out-of-frame Intra-chr q22.2 q22.2 124807 ChimerSeq ChiTaRs ChiTaRs TIAM1-HELZ TIAM1 chr21 32850277 HELZ chr17 65080033 Exonic hg19 NA L44394 Out-of-frame Inter-chr q22.11 q24.2 124808 ChimerSeq ChiTaRs ChiTaRs CLASRP-CLASRP CLASRP chr19 45574205 CLASRP chr19 45570827 Exonic hg19 NA CA450264 Out-of-frame Intra-chr q13.32 q13.32 124809 ChimerSeq ChiTaRs ChiTaRs LRRC37B-COL18A1 LRRC37B chr17 30376167 COL18A1 chr21 46867704 Exonic hg19 NA BF366134 Out-of-frame Inter-chr q11.2 q22.3 124810 ChimerSeq ChiTaRs ChiTaRs CES1-H2AFY2 CES1 chr16 55846928 H2AFY2 chr10 71851077 Exonic hg19 NA BP241894 Out-of-frame Inter-chr q12.2 q22.1 124811 ChimerSeq ChiTaRs ChiTaRs SMARCB1-SMARCB1 SMARCB1 chr22 24134026 SMARCB1 chr22 24159069 Exonic hg19 NA BE932674 Out-of-frame Intra-chr q11.23 Oncogene Tumor suppressor gene q11.23 Oncogene Tumor suppressor gene 124812 ChimerSeq ChiTaRs ChiTaRs FEM1B-FEM1B FEM1B chr15 68583640 FEM1B chr15 68583302 Exonic hg19 NA CA502844 3'UTR-CDS Intra-chr q23 q23 124813 ChimerSeq ChiTaRs ChiTaRs MRAP-SMC2 MRAP chr21 33686527 SMC2 chr9 106880497 Exonic hg19 NA BE046964 Out-of-frame Inter-chr q22.11 q31.1 124814 ChimerSeq ChiTaRs ChiTaRs MBD2-MBD2 MBD2 chr18 51740104 MBD2 chr18 51740396 Exonic hg19 NA DW465894 Out-of-frame Intra-chr q21.2 Transcription factor q21.2 Transcription factor 124815 ChimerSeq ChiTaRs ChiTaRs ARHGAP23-KLK6 ARHGAP23 chr17 36668323 KLK6 chr19 51465002 Exonic hg19 NA BE181544 Out-of-frame Inter-chr q12 q13.41 Tumor suppressor gene 124816 ChimerSeq ChiTaRs ChiTaRs SAP30BP-BEAN1 SAP30BP chr17 73663496 BEAN1 chr16 66526834 Exonic hg19 NA CD624674 Out-of-frame Inter-chr q25.1 q21 124817 ChimerSeq ChiTaRs ChiTaRs CHST11-CHST11 CHST11 chr12 104867946 CHST11 chr12 104866579 Exonic hg19 NA BI062214 Out-of-frame Intra-chr q23.3 q23.3 124818 ChimerSeq ChiTaRs ChiTaRs AES-ENGASE AES chr19 3053234 ENGASE chr17 77081352 Exonic hg19 NA AW872824 Out-of-frame Inter-chr p13.3 q25.3 124819 ChimerSeq ChiTaRs ChiTaRs PSMA7-PSMA7 PSMA7 chr20 60714879 PSMA7 chr20 60711952 Exonic hg19 NA BF237904 Out-of-frame Intra-chr q13.33 q13.33 124820 ChimerSeq ChiTaRs ChiTaRs ATP9A-B3GALNT2 ATP9A chr20 50216561 B3GALNT2 chr1 235650598 Exonic hg19 NA BF083064 Out-of-frame Inter-chr q13.2 124821 ChimerSeq ChiTaRs ChiTaRs SGTA-PSMF1 SGTA chr19 2783271 PSMF1 chr20 1145342 Exonic hg19 NA BP249774 Out-of-frame Inter-chr p13.3 p13 124822 ChimerSeq ChiTaRs ChiTaRs CMTM3-NCSTN CMTM3 chr16 66646769 NCSTN chr1 160328601 Exonic hg19 NA CN403994 Out-of-frame Inter-chr q22.1 Tumor suppressor gene q23.2 124823 ChimerSeq ChiTaRs ChiTaRs OSER1-OSER1 OSER1 chr20 42838788 OSER1 chr20 42836782 Exonic hg19 NA BE089584 Out-of-frame Intra-chr q13.12 q13.12 124824 ChimerSeq ChiTaRs ChiTaRs LONP1-MAN1A2 LONP1 chr19 5705823 MAN1A2 chr1 117953465 Exonic hg19 NA BC004934 Out-of-frame Inter-chr p13.3 p12 124825 ChimerSeq ChiTaRs ChiTaRs CSNK1E-CSNK1E CSNK1E chr22 38690126 CSNK1E chr22 38689468 Exonic hg19 NA CN284174 Out-of-frame Intra-chr q13.1 q13.1 124826 ChimerSeq ChiTaRs ChiTaRs TBC1D24-TBC1D24 TBC1D24 chr16 2569850 TBC1D24 chr16 2569889 Exonic hg19 NA D82114 Out-of-frame Intra-chr p13.3 p13.3 124827 ChimerSeq ChiTaRs ChiTaRs KCTD19-PRKAG1 KCTD19 chr16 67332614 PRKAG1 chr12 49396616 Exonic hg19 NA BE939184 Out-of-frame Inter-chr q22.1 q13.12 124828 ChimerSeq ChiTaRs ChiTaRs H1F0-SLC20A2 H1F0 chr22 38202213 SLC20A2 chr8 42318567 Exonic hg19 NA BF748524 Out-of-frame Inter-chr q13.1 p11.21 124829 ChimerSeq ChiTaRs ChiTaRs POLR2A-PVRL2 POLR2A chr17 7409252 PVRL2 chr19 45376694 Exonic hg19 NA BE159844 Out-of-frame Inter-chr p13.1 124830 ChimerSeq ChiTaRs ChiTaRs PLK1-BASP1 PLK1 chr16 23695247 BASP1 chr5 17276554 Exonic hg19 NA BE925244 Out-of-frame Inter-chr p12.2 Other:PLK Tumor suppressor gene p15.1 Tumor suppressor gene 124831 ChimerSeq ChiTaRs ChiTaRs ASUN-ASUN ASUN chr12 27066497 ASUN chr12 27066536 Exonic hg19 NA BE258274 Out-of-frame Intra-chr 124832 ChimerSeq ChiTaRs ChiTaRs FAM20A-PDE8A FAM20A chr17 66531346 PDE8A chr15 85681730 Exonic hg19 NA W92044 Out-of-frame Inter-chr q24.2 q25.3 124833 ChimerSeq ChiTaRs ChiTaRs LMF1-KLC2 LMF1 chr16 1025938 KLC2 chr11 66035106 Exonic hg19 NA CB046524 Out-of-frame Inter-chr p13.3 q13.2 124834 ChimerSeq ChiTaRs ChiTaRs PLEKHB1-PLEKHB1 PLEKHB1 chr11 73361679 PLEKHB1 chr11 73360063 Exonic hg19 NA BF364674 Out-of-frame Intra-chr q13.4 q13.4 124835 ChimerSeq ChiTaRs ChiTaRs MTHFS-ABCF1 MTHFS chr15 80158042 ABCF1 chr6 1890845 Exonic hg19 NA BE763194 Out-of-frame Inter-chr q25.1 124836 ChimerSeq ChiTaRs ChiTaRs RNF213-TPP1 RNF213 chr17 78367313 TPP1 chr11 6635336 Exonic hg19 NA BI027704 Out-of-frame Inter-chr q25.3 Oncogene p15.4 124837 ChimerSeq ChiTaRs ChiTaRs FOXG1-RNF169 FOXG1 chr14 29238034 RNF169 chr11 74495901 Exonic hg19 NA AW952674 Out-of-frame Inter-chr q12 Transcription factor q13.4 124838 ChimerSeq ChiTaRs ChiTaRs TPT1-TPT1 TPT1 chr13 45914321 TPT1 chr13 45914847 Exonic hg19 NA BE174904 Out-of-frame Intra-chr q14.13 q14.13 124839 ChimerSeq ChiTaRs ChiTaRs PLEKHH1-PLEKHH1 PLEKHH1 chr14 68049819 PLEKHH1 chr14 68054194 Exonic hg19 NA DB309444 Out-of-frame Intra-chr q24.1 q24.1 124840 ChimerSeq ChiTaRs ChiTaRs AMN1-MAPK8 AMN1 chr12 31824260 MAPK8 chr10 49633955 Exonic hg19 NA BF196394 Out-of-frame Inter-chr p11.21 q11.22 Oncogene 124841 ChimerSeq ChiTaRs ChiTaRs HNRNPA1-BEST3 HNRNPA1 chr12 54674858 BEST3 chr12 70065630 Exonic hg19 NA CR748314 Out-of-frame Intra-chr q13.13 q15 124842 ChimerSeq ChiTaRs ChiTaRs CLEC12B-ANKRD12 CLEC12B chr12 10166792 ANKRD12 chr18 9255824 Exonic hg19 NA BE938624 Out-of-frame Inter-chr p13.2 p11.22 124843 ChimerSeq ChiTaRs ChiTaRs CAPNS1-SPARC CAPNS1 chr19 36640871 SPARC chr5 151051196 Exonic hg19 NA AW607373 Out-of-frame Inter-chr q13.12 q33.1 Tumor suppressor gene 124844 ChimerSeq ChiTaRs ChiTaRs TRAP1-PODXL TRAP1 chr16 3713489 PODXL chr7 131193709 Exonic hg19 NA BF820713 Out-of-frame Inter-chr p13.3 q32.3 124845 ChimerSeq ChiTaRs ChiTaRs FBLN1-FBLN1 FBLN1 chr22 45996662 FBLN1 chr22 45970426 Exonic hg19 NA BE929893 Out-of-frame Intra-chr q13.31 Tumor suppressor gene q13.31 Tumor suppressor gene 124846 ChimerSeq ChiTaRs ChiTaRs C20orf112-JUP C20orf112 chr20 31074846 JUP chr17 39715478 Exonic hg19 NA AK095613 Out-of-frame Inter-chr q21.2 Tumor suppressor gene 124847 ChimerSeq ChiTaRs ChiTaRs SBK1-UNC13A SBK1 chr16 28335049 UNC13A chr19 17729249 Exonic hg19 NA M85703 Out-of-frame Inter-chr p12.1 p13.11 124848 ChimerSeq ChiTaRs ChiTaRs CDH1-CDH1 CDH1 chr16 68847374 CDH1 chr16 68844170 Exonic hg19 NA BF155173 Out-of-frame Intra-chr q22.1 Oncogene Tumor suppressor gene q22.1 Oncogene Tumor suppressor gene 124849 ChimerSeq ChiTaRs ChiTaRs MAG-NMNAT3 MAG chr19 35786353 NMNAT3 chr3 139279838 Exonic hg19 NA BM544763 Out-of-frame Inter-chr q13.12 q23 124850 ChimerSeq ChiTaRs ChiTaRs MYPOP-RAI1 MYPOP chr19 46403703 RAI1 chr17 17663283 Exonic hg19 NA BG992883 Out-of-frame Inter-chr q13.32 Transcription factor p11.2 124851 ChimerSeq ChiTaRs ChiTaRs FAM177A1-FAM177A1 FAM177A1 chr14 35515778 FAM177A1 chr14 35515804 Exonic hg19 NA N50523 Out-of-frame Intra-chr q13.2 q13.2 124852 ChimerSeq ChiTaRs ChiTaRs CDC25B-CDC25B CDC25B chr20 3786762 CDC25B chr20 3785902 Exonic hg19 NA BM666733 Out-of-frame Intra-chr p13 p13 124853 ChimerSeq ChiTaRs ChiTaRs MDM2-UBE2J2 MDM2 chr12 69236110 UBE2J2 chr1 1192372 Exonic hg19 NA AW439303 Out-of-frame Inter-chr q15 Oncogene p36.33 124854 ChimerSeq ChiTaRs ChiTaRs RASGRF1-HNRNPD RASGRF1 chr15 79298561 HNRNPD chr4 83294752 Exonic hg19 NA DA845763 Out-of-frame Inter-chr q25.1 q21.22 124855 ChimerSeq ChiTaRs ChiTaRs UBE2V1-CLU UBE2V1 chr20 48698287 CLU chr8 27463917 Exonic hg19 NA BE830293 Out-of-frame Inter-chr q13.13 p21.1 Tumor suppressor gene 124856 ChimerSeq ChiTaRs ChiTaRs CYB561-HK1 CYB561 chr17 61510318 HK1 chr10 71158546 Exonic hg19 NA BI003573 Out-of-frame Inter-chr q23.3 q22.1 124857 ChimerSeq ChiTaRs ChiTaRs RPLP1-RANBP2 RPLP1 chr15 69747885 RANBP2 chr2 109389349 Exonic hg19 NA AY170823 Out-of-frame Inter-chr q23 q13 124858 ChimerSeq ChiTaRs ChiTaRs SMARCA4-MYO1D SMARCA4 chr19 11149594 MYO1D chr17 31191720 Exonic hg19 NA BG982203 Out-of-frame Inter-chr p13.2 Oncogene Tumor suppressor gene q11.2 124859 ChimerSeq ChiTaRs ChiTaRs RCCD1-PRC1 RCCD1 chr15 91531473 PRC1 chr15 91531027 Exonic hg19 NA AW003923 Out-of-frame Intra-chr q26.1 q26.1 124860 ChimerSeq ChiTaRs ChiTaRs SMCR7L-SMCR7L SMCR7L chr22 39913122 SMCR7L chr22 39912749 Exonic hg19 NA BI086913 Out-of-frame Intra-chr 124861 ChimerSeq ChiTaRs ChiTaRs TTC19-TTC19 TTC19 chr17 15922370 TTC19 chr17 15920083 Exonic hg19 NA AK130773 Out-of-frame Intra-chr p12 p12 124862 ChimerSeq ChiTaRs ChiTaRs NKAIN4-NKAIN4 NKAIN4 chr20 61884908 NKAIN4 chr20 61881303 Exonic hg19 NA BP349453 Out-of-frame Intra-chr q13.33 q13.33 124863 ChimerSeq ChiTaRs ChiTaRs FAM20A-FAM20A FAM20A chr17 66580746 FAM20A chr17 66589749 Exonic hg19 NA BG679473 Out-of-frame Intra-chr q24.2 q24.2 124864 ChimerSeq ChiTaRs ChiTaRs MALAT1-NSRP1 MALAT1 chr11 65268005 NSRP1 chr17 28511822 Exonic hg19 NA BG426103 Out-of-frame Inter-chr q13.1 q11.2 124865 ChimerSeq ChiTaRs ChiTaRs TPM1-HOPX TPM1 chr15 63363855 HOPX chr4 57515838 Exonic hg19 NA T28253 Out-of-frame Inter-chr q22.2 q12 Tumor suppressor gene 124866 ChimerSeq ChiTaRs ChiTaRs ZDHHC17-ZDHHC17 ZDHHC17 chr12 77247200 ZDHHC17 chr12 77247190 Exonic hg19 NA BF343613 Out-of-frame Intra-chr q21.2 q21.2 124867 ChimerSeq ChiTaRs ChiTaRs TOX3-ARIH2 TOX3 chr16 52518394 ARIH2 chr3 48971240 Exonic hg19 NA BX098323 Out-of-frame Inter-chr q12.1 p21.31 124868 ChimerSeq ChiTaRs ChiTaRs RFX7-RFX7 RFX7 chr15 56383425 RFX7 chr15 56382743 Exonic hg19 NA BG257043 Out-of-frame Intra-chr q21.3 Transcription factor q21.3 Transcription factor 124869 ChimerSeq ChiTaRs ChiTaRs MSI2-SAP130 MSI2 chr17 55514040 SAP130 chr2 128707751 Exonic hg19 NA BF359353 Out-of-frame Inter-chr q22 q14.3 124870 ChimerSeq ChiTaRs ChiTaRs CNDP2-CNDP2 CNDP2 chr18 72178184 CNDP2 chr18 72167146 Exonic hg19 NA BF846333 Out-of-frame Intra-chr q22.3 Tumor suppressor gene q22.3 Tumor suppressor gene 124871 ChimerSeq ChiTaRs ChiTaRs HYOU1-TMEM59 HYOU1 chr11 118915041 TMEM59 chr1 54497488 Exonic hg19 NA BM311763 Out-of-frame Inter-chr p32.3 124872 ChimerSeq ChiTaRs ChiTaRs CACNA1C-MNAT1 CACNA1C chr12 2162778 MNAT1 chr14 61346430 Exonic hg19 NA DA692923 Out-of-frame Inter-chr p13.33 q23.1 124873 ChimerSeq ChiTaRs ChiTaRs SAP18-SAP18 SAP18 chr13 21721494 SAP18 chr13 21715072 Exonic hg19 NA AW975353 Out-of-frame Intra-chr q12.11 q12.11 124874 ChimerSeq ChiTaRs ChiTaRs KDELR1-KDELR1 KDELR1 chr19 48893731 KDELR1 chr19 48886252 Exonic hg19 NA CN300933 Out-of-frame Intra-chr q13.33 q13.33 124875 ChimerSeq ChiTaRs ChiTaRs AKAP13-AKAP13 AKAP13 chr15 85989494 AKAP13 chr15 85989414 Exonic hg19 NA AW847003 Out-of-frame Intra-chr q25.3 q25.3 124876 ChimerSeq ChiTaRs ChiTaRs CORO7-PAM16-LOX CORO7-PAM16 chr16 4433510 LOX chr5 121401239 Exonic hg19 NA AI168173 Out-of-frame Inter-chr p13.3 q23.1 124877 ChimerSeq ChiTaRs ChiTaRs NF2-LSM14A NF2 chr22 30094587 LSM14A chr19 34683954 Exonic hg19 NA AI760783 Out-of-frame Inter-chr q12.2 Oncogene Tumor suppressor gene 124878 ChimerSeq ChiTaRs ChiTaRs THOC6-THOC6 THOC6 chr16 3077270 THOC6 chr16 3076726 Exonic hg19 NA BG959463 Out-of-frame Intra-chr p13.3 p13.3 124879 ChimerSeq ChiTaRs ChiTaRs NFE2L1-TSPAN11 NFE2L1 chr17 46136977 TSPAN11 chr12 31147877 Exonic hg19 NA T12033 Out-of-frame Inter-chr q21.32 Transcription factor p11.21 124880 ChimerSeq ChiTaRs ChiTaRs LIMK2-ATG2A LIMK2 chr22 31661868 ATG2A chr11 64666112 Exonic hg19 NA AW363833 Out-of-frame Inter-chr q12.2 TKL:LISK q13.1 124881 ChimerSeq ChiTaRs ChiTaRs VPS29-ZNF776 VPS29 chr12 110938713 ZNF776 chr19 58203473 Exonic hg19 NA AI219743 Out-of-frame Inter-chr q24.11 q13.43 Transcription factor 124882 ChimerSeq ChiTaRs ChiTaRs PRR4-FRYL PRR4 chr12 10999719 FRYL chr4 48517226 Exonic hg19 NA DB349523 Out-of-frame Inter-chr p11 124883 ChimerSeq ChiTaRs ChiTaRs FAM20A-PDE8A FAM20A chr17 66531346 PDE8A chr15 85681733 Exonic hg19 NA W91923 Out-of-frame Inter-chr q24.2 q25.3 124884 ChimerSeq ChiTaRs ChiTaRs GNAO1-GNAO1 GNAO1 chr16 56390249 GNAO1 chr16 56389963 Exonic hg19 NA AW014453 Out-of-frame Intra-chr q13 q13 124885 ChimerSeq ChiTaRs ChiTaRs COASY-PPAN COASY chr17 40714380 PPAN chr19 10218787 Exonic hg19 NA CR739363 Out-of-frame Inter-chr q21.2 p13.2 124886 ChimerSeq ChiTaRs ChiTaRs SCN2B-PLXNB3 SCN2B chr11 118047335 PLXNB3 chrX 153045117 Exonic hg19 NA DA098743 Out-of-frame Inter-chr q23.3 q28 124887 ChimerSeq ChiTaRs ChiTaRs ARHGEF12-UQCC ARHGEF12 chr11 120307684 UQCC chr20 33987115 Exonic hg19 NA CV316623 Out-of-frame Inter-chr q23.3 Tumor suppressor gene 124888 ChimerSeq ChiTaRs ChiTaRs RPL38-TRAPPC6B RPL38 chr17 72206019 TRAPPC6B chr14 39619329 Exonic hg19 NA AA977713 3'UTR-3'UTR Inter-chr q25.1 q21.1 124889 ChimerSeq ChiTaRs ChiTaRs KRT86-ITGA6 KRT86 chr12 52651210 ITGA6 chr2 173370617 Exonic hg19 NA BF849223 Out-of-frame Inter-chr q13.13 q31.1 124890 ChimerSeq ChiTaRs ChiTaRs ZNFX1-AS1-DDX47 ZNFX1-AS1 chr20 47895558 DDX47 chr12 12966286 Exonic hg19 NA DB242863 Out-of-frame Inter-chr p13.1 Tumor suppressor gene 124891 ChimerSeq ChiTaRs ChiTaRs DNAJC3-CBFA2T2 DNAJC3 chr13 96444952 CBFA2T2 chr20 32110101 Exonic hg19 NA BG992563 Out-of-frame Inter-chr q32.1 q11.21 124892 ChimerSeq ChiTaRs ChiTaRs EEF2-EEF2 EEF2 chr19 3976672 EEF2 chr19 3976270 Exonic hg19 NA CN263823 Out-of-frame Intra-chr p13.3 p13.3 124893 ChimerSeq ChiTaRs ChiTaRs PRCD-CLN6 PRCD chr17 74549651 CLN6 chr15 68510262 Exonic hg19 NA AA866153 Out-of-frame Inter-chr q25.1 q23 124894 ChimerSeq ChiTaRs ChiTaRs AFMID-IDS AFMID chr17 76203316 IDS chrX 148560300 Exonic hg19 NA BX647783 Out-of-frame Inter-chr q25.3 q28 124895 ChimerSeq ChiTaRs ChiTaRs OLR1-EPS15L1 OLR1 chr12 10323107 EPS15L1 chr19 16522911 Exonic hg19 NA BF903953 Out-of-frame Inter-chr p13.2 p13.11 124896 ChimerSeq ChiTaRs ChiTaRs TMEM50B-CD44 TMEM50B chr21 34821880 CD44 chr11 35233263 Exonic hg19 NA AW935153 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene 124897 ChimerSeq ChiTaRs ChiTaRs ARHGAP8-GTPBP4 ARHGAP8 chr22 45152466 GTPBP4 chr10 1056379 Exonic hg19 NA BF764003 Out-of-frame Inter-chr q13.31 p15.3 Tumor suppressor gene 124898 ChimerSeq ChiTaRs ChiTaRs CDH1-EFNB2 CDH1 chr16 68862132 EFNB2 chr13 107147246 Exonic hg19 NA BF819233 Out-of-frame Inter-chr q22.1 Oncogene Tumor suppressor gene q33.3 124899 ChimerSeq ChiTaRs ChiTaRs CYP19A1-CYP19A1 CYP19A1 chr15 51622577 CYP19A1 chr15 51615781 Exonic hg19 NA BG009163 Out-of-frame Intra-chr q21.2 q21.2 124900 ChimerSeq ChiTaRs ChiTaRs ANO2-ANO2 ANO2 chr12 5819678 ANO2 chr12 5819138 Exonic hg19 NA W28663 Out-of-frame Intra-chr p13.31 p13.31 124901 ChimerSeq ChiTaRs ChiTaRs GAB2-ST7 GAB2 chr11 77929899 ST7 chr7 116860485 Exonic hg19 NA BF883953 Out-of-frame Inter-chr q14.1 q31.2 Tumor suppressor gene 124902 ChimerSeq ChiTaRs ChiTaRs ACSM2B-CYP3A4 ACSM2B chr16 20548553 CYP3A4 chr7 99358595 Exonic hg19 NA CB162303 Out-of-frame Inter-chr p12.3 q22.1 124903 ChimerSeq ChiTaRs ChiTaRs ZC3H13-TMEM232 ZC3H13 chr13 46530170 TMEM232 chr5 110036315 Exonic hg19 NA BF993233 Out-of-frame Inter-chr q14.13 q22.1 124904 ChimerSeq ChiTaRs ChiTaRs RARA-BRD4 RARA chr17 38487646 BRD4 chr19 15366976 Exonic hg19 NA BU154393 Out-of-frame Inter-chr q21.2 Oncogene Transcription factor p13.12 Atypical:BRD 124905 ChimerSeq ChiTaRs ChiTaRs PRKCSH-GANAB PRKCSH chr19 11557160 GANAB chr11 62407307 Exonic hg19 NA BE773523 Out-of-frame Inter-chr p13.2 q12.3 Tumor suppressor gene 124906 ChimerSeq ChiTaRs ChiTaRs ARF3-ITPR2 ARF3 chr12 49334840 ITPR2 chr12 26959676 Exonic hg19 NA BQ331543 Out-of-frame Intra-chr q13.12 p11.23 124907 ChimerSeq ChiTaRs ChiTaRs JUP-NRG3 JUP chr17 39847651 NRG3 chr10 83842520 Exonic hg19 NA BF826653 Out-of-frame Inter-chr q21.2 Tumor suppressor gene q23.1 124908 ChimerSeq ChiTaRs ChiTaRs NEUROD2-IRF2BP2 NEUROD2 chr17 37760169 IRF2BP2 chr1 234740323 Exonic hg19 NA T07193 Out-of-frame Inter-chr q12 Transcription factor q42.3 124909 ChimerSeq ChiTaRs ChiTaRs FOXK2-FOXK2 FOXK2 chr17 80483602 FOXK2 chr17 80483411 Exonic hg19 NA BE073843 Out-of-frame Intra-chr q25.3 Transcription factor q25.3 Transcription factor 124910 ChimerSeq ChiTaRs ChiTaRs GNAO1-FAM81A GNAO1 chr16 56390865 FAM81A chr15 59732524 Exonic hg19 NA M78823 Out-of-frame Inter-chr q13 q22.2 124911 ChimerSeq ChiTaRs ChiTaRs C14orf37-C14orf37 C14orf37 chr14 58738606 C14orf37 chr14 58738633 Exonic hg19 NA BF083753 Out-of-frame Intra-chr q23.1 q23.1 124912 ChimerSeq ChiTaRs ChiTaRs TRAPPC5-TRAPPC5 TRAPPC5 chr19 7747200 TRAPPC5 chr19 7747312 Exonic hg19 NA AI702783 Out-of-frame Intra-chr p13.2 p13.2 124913 ChimerSeq ChiTaRs ChiTaRs SNRPD2-SNRPD2 SNRPD2 chr19 46190786 SNRPD2 chr19 46191644 Exonic hg19 NA BF885323 3'UTR-CDS Intra-chr q13.32 q13.32 124914 ChimerSeq ChiTaRs ChiTaRs USP22-USP22 USP22 chr17 20905720 USP22 chr17 20905181 Exonic hg19 NA AW504683 Out-of-frame Intra-chr p11.2 p11.2 124915 ChimerSeq ChiTaRs ChiTaRs ATXN7L3B-MRPS22 ATXN7L3B chr12 74935217 MRPS22 chr3 139075743 Exonic hg19 NA DR980083 Out-of-frame Inter-chr q21.1 q23 124916 ChimerSeq ChiTaRs ChiTaRs N4BP2L2-N4BP2L2 N4BP2L2 chr13 33092092 N4BP2L2 chr13 33096384 Exonic hg19 NA BI015483 Out-of-frame Intra-chr q13.1 q13.1 124917 ChimerSeq ChiTaRs ChiTaRs SMG1-COMMD1 SMG1 chr16 18819646 COMMD1 chr2 62357034 Exonic hg19 NA BG769973 Out-of-frame Inter-chr p12.3 Atypical:PIKK p15 124918 ChimerSeq ChiTaRs ChiTaRs METTL1-TGFBRAP1 METTL1 chr12 58165878 TGFBRAP1 chr2 105893934 Exonic hg19 NA N29143 Out-of-frame Inter-chr q14.1 q12.2 124919 ChimerSeq ChiTaRs ChiTaRs SIRPB2-HSPA1A SIRPB2 chr20 1472169 HSPA1A chr6 3078464 Exonic hg19 NA AK097113 Out-of-frame Inter-chr p13 124920 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65267111 MALAT1 chr11 65267157 Exonic hg19 NA BG961413 Out-of-frame Intra-chr q13.1 q13.1 124921 ChimerSeq ChiTaRs ChiTaRs FAM96A-PRKCB FAM96A chr15 64386096 PRKCB chr16 24166004 Exonic hg19 NA DB116073 5'UTR-CDS Inter-chr q22.31 p12.2 Tumor suppressor gene 124922 ChimerSeq ChiTaRs ChiTaRs METTL23-METTL23 METTL23 chr17 74727925 METTL23 chr17 74727971 Exonic hg19 NA BF825543 Out-of-frame Intra-chr q25.1 q25.1 124923 ChimerSeq ChiTaRs ChiTaRs DPM1-DPM1 DPM1 chr20 49551749 DPM1 chr20 49557676 Exonic hg19 NA CB241933 Out-of-frame Intra-chr q13.13 q13.13 124924 ChimerSeq ChiTaRs ChiTaRs RSRC2-RSRC2 RSRC2 chr12 122992863 RSRC2 chr12 122992928 Exonic hg19 NA CB157763 Out-of-frame Intra-chr q24.31 q24.31 124925 ChimerSeq ChiTaRs ChiTaRs FAHD1-KLHDC4 FAHD1 chr16 1879123 KLHDC4 chr16 87766939 Exonic hg19 NA BE061963 Out-of-frame Intra-chr p13.3 q24.2 124926 ChimerSeq ChiTaRs ChiTaRs GOSR2-GOSR2 GOSR2 chr17 45016350 GOSR2 chr17 45016038 Exonic hg19 NA AI400943 Out-of-frame Intra-chr q21.32 q21.32 124927 ChimerSeq ChiTaRs ChiTaRs CARD8-CARD8 CARD8 chr19 48715094 CARD8 chr19 48715133 Exonic hg19 NA BE086543 Out-of-frame Intra-chr q13.33 q13.33 124928 ChimerSeq ChiTaRs ChiTaRs DSC2-DSC2 DSC2 chr18 28646556 DSC2 chr18 28646229 Exonic hg19 NA AA805783 Out-of-frame Intra-chr q12.1 Tumor suppressor gene q12.1 Tumor suppressor gene 124929 ChimerSeq ChiTaRs ChiTaRs CACNA1C-CACNA1C CACNA1C chr12 2764465 CACNA1C chr12 2764464 Exonic hg19 NA BG950463 Out-of-frame Intra-chr p13.33 p13.33 124930 ChimerSeq ChiTaRs ChiTaRs HELZ-HELZ HELZ chr17 65190956 HELZ chr17 65190269 Exonic hg19 NA BF351053 Out-of-frame Intra-chr q24.2 q24.2 124931 ChimerSeq ChiTaRs ChiTaRs USP10-SH3BP5 USP10 chr16 84748836 SH3BP5 chr3 15357864 Exonic hg19 NA BQ182103 Out-of-frame Inter-chr q24.1 p25.1 124932 ChimerSeq ChiTaRs ChiTaRs ACVRL1-ACVRL1 ACVRL1 chr12 52317145 ACVRL1 chr12 52316494 Exonic hg19 NA CA436333 3'UTR-3'UTR Intra-chr q13.13 Oncogene q13.13 Oncogene 124933 ChimerSeq ChiTaRs ChiTaRs CYP19A1-PHF21A CYP19A1 chr15 51588343 PHF21A chr11 46000083 Exonic hg19 NA BF886753 Out-of-frame Inter-chr q21.2 p11.2 Transcription factor 124934 ChimerSeq ChiTaRs ChiTaRs RTCB-RTCB RTCB chr22 32804213 RTCB chr22 32783834 Exonic hg19 NA BG978503 Out-of-frame Intra-chr q12.3 q12.3 124935 ChimerSeq ChiTaRs ChiTaRs CFL1-CCDC88C CFL1 chr11 65622777 CCDC88C chr14 91779621 Exonic hg19 NA BG744763 Out-of-frame Inter-chr q13.1 q32.12 124936 ChimerSeq ChiTaRs ChiTaRs SP1-QRICH1 SP1 chr12 53776902 QRICH1 chr3 49070424 Exonic hg19 NA AW176763 Out-of-frame Inter-chr q13.13 Transcription factor p21.31 124937 ChimerSeq ChiTaRs ChiTaRs TBC1D2B-TBC1D2B TBC1D2B chr15 78305315 TBC1D2B chr15 78301375 Exonic hg19 NA BG006543 Out-of-frame Intra-chr q25.1 q25.1 124938 ChimerSeq ChiTaRs ChiTaRs EEF2-EEF2 EEF2 chr19 3977339 EEF2 chr19 3976441 Exonic hg19 NA BQ347823 Out-of-frame Intra-chr p13.3 p13.3 124939 ChimerSeq ChiTaRs ChiTaRs SEC23A-NR6A1 SEC23A chr14 39561435 NR6A1 chr9 127366382 Exonic hg19 NA BE072523 Out-of-frame Inter-chr q21.1 q33.3 Transcription factor 124940 ChimerSeq ChiTaRs ChiTaRs AREL1-SRPK2 AREL1 chr14 75131630 SRPK2 chr7 104885839 Exonic hg19 NA BE258233 Out-of-frame Inter-chr q24.3 q22.3 CMGC:SRPK 124941 ChimerSeq ChiTaRs ChiTaRs ELF1-TSIX ELF1 chr13 41508229 TSIX chrX 73043146 Exonic hg19 NA BE072793 Out-of-frame Inter-chr q14.11 Transcription factor q13.2 124942 ChimerSeq ChiTaRs ChiTaRs GSTP1-WHSC1 GSTP1 chr11 67353645 WHSC1 chr4 1962760 Exonic hg19 NA AW390893 Out-of-frame Inter-chr q13.2 Tumor suppressor gene Oncogene 124943 ChimerSeq ChiTaRs ChiTaRs KIAA0247-BRK1 KIAA0247 chr14 70142943 BRK1 chr3 10168290 Exonic hg19 NA AK127083 Out-of-frame Inter-chr p25.3 124944 ChimerSeq ChiTaRs ChiTaRs CDC42EP1-FAM96B CDC42EP1 chr22 37962192 FAM96B chr16 66966166 Exonic hg19 NA AI827663 Out-of-frame Inter-chr q13.1 q22.1 124945 ChimerSeq ChiTaRs ChiTaRs PTMS-NDRG1 PTMS chr12 6880118 NDRG1 chr8 134250844 Exonic hg19 NA BU621643 3'UTR-3'UTR Inter-chr p13.31 q24.22 Tumor suppressor gene 124946 ChimerSeq ChiTaRs ChiTaRs SYN3-PRKDC SYN3 chr22 33200159 PRKDC chr8 48826484 Exonic hg19 NA BF923303 Out-of-frame Inter-chr q12.3 q11.21 Oncogene 124947 ChimerSeq ChiTaRs ChiTaRs EIF3J-EIF3J EIF3J chr15 44843721 EIF3J chr15 44843073 Exonic hg19 NA BQ938173 Out-of-frame Intra-chr q21.1 q21.1 124948 ChimerSeq ChiTaRs ChiTaRs ZFYVE19-ZFYVE19 ZFYVE19 chr15 41101645 ZFYVE19 chr15 41099977 Exonic hg19 NA W07833 Out-of-frame Intra-chr q15.1 q15.1 124949 ChimerSeq ChiTaRs ChiTaRs SPOP-TRNAU1AP SPOP chr17 47677549 TRNAU1AP chr1 28904053 Exonic hg19 NA AW298043 Out-of-frame Inter-chr q21.33 Oncogene Tumor suppressor gene p35.3 124950 ChimerSeq ChiTaRs ChiTaRs EPB41L3-MAPRE3 EPB41L3 chr18 5540395 MAPRE3 chr2 27246863 Exonic hg19 NA DB026683 Out-of-frame Inter-chr p11.31 Tumor suppressor gene p23.3 124951 ChimerSeq ChiTaRs ChiTaRs NUCB1-IL9R NUCB1 chr19 49422539 IL9R chrY 59342799 Exonic hg19 NA CF131283 Out-of-frame Inter-chr q13.33 q28 124952 ChimerSeq ChiTaRs ChiTaRs RILPL1-COX8A RILPL1 chr12 124008119 COX8A chr11 63742160 Exonic hg19 NA BI060853 Out-of-frame Inter-chr q24.31 q13.1 124953 ChimerSeq ChiTaRs ChiTaRs FBRS-SOBP FBRS chr16 30674010 SOBP chr6 107833035 Exonic hg19 NA BG003833 Out-of-frame Inter-chr p11.2 q21 124954 ChimerSeq ChiTaRs ChiTaRs EFNB2-ATIC EFNB2 chr13 107163086 ATIC chr2 216212908 Exonic hg19 NA BE144253 Out-of-frame Inter-chr q33.3 q35 124955 ChimerSeq ChiTaRs ChiTaRs COX10-PCGF3 COX10 chr17 13982667 PCGF3 chr4 760119 Exonic hg19 NA DB233923 Out-of-frame Inter-chr p12 p16.3 124956 ChimerSeq ChiTaRs ChiTaRs SOCS7-SOCS7 SOCS7 chr17 36560220 SOCS7 chr17 36561003 Exonic hg19 NA AW964963 Out-of-frame Intra-chr q12 q12 124957 ChimerSeq ChiTaRs ChiTaRs TMC6-CRYM TMC6 chr17 76122448 CRYM chr16 21269944 Exonic hg19 NA BG988143 Out-of-frame Inter-chr q25.3 124958 ChimerSeq ChiTaRs ChiTaRs STRN3-ACTR8 STRN3 chr14 31427955 ACTR8 chr3 53901493 Exonic hg19 NA BM724513 Out-of-frame Inter-chr q12 p21.1 124959 ChimerSeq ChiTaRs ChiTaRs MRPL28-RARRES3 MRPL28 chr16 418637 RARRES3 chr11 63312122 Exonic hg19 NA BF360513 Out-of-frame Inter-chr p13.3 q12.3 Tumor suppressor gene 124960 ChimerSeq ChiTaRs ChiTaRs TMBIM6-SLC35A4 TMBIM6 chr12 50156921 SLC35A4 chr5 139948594 Exonic hg19 NA BU945543 Out-of-frame Inter-chr q13.12 q31.3 124961 ChimerSeq ChiTaRs ChiTaRs TAPBPL-TAPBPL TAPBPL chr12 6571877 TAPBPL chr12 6571880 Exonic hg19 NA BQ327713 Out-of-frame Intra-chr p13.31 p13.31 124962 ChimerSeq ChiTaRs ChiTaRs PPM1F-HDAC4 PPM1F chr22 22275377 HDAC4 chr2 240223703 Exonic hg19 NA BF870073 Out-of-frame Inter-chr q11.22 q37.3 124963 ChimerSeq ChiTaRs ChiTaRs SMG1-DOCK3 SMG1 chr16 18840049 DOCK3 chr3 50981954 Exonic hg19 NA BE771673 Out-of-frame Inter-chr p12.3 Atypical:PIKK p21.2 124964 ChimerSeq ChiTaRs ChiTaRs ZFHX3-SFXN1 ZFHX3 chr16 72848993 SFXN1 chr5 174953993 Exonic hg19 NA DW460543 Out-of-frame Inter-chr q22.3 Tumor suppressor gene Transcription factor q35.2 124965 ChimerSeq ChiTaRs ChiTaRs CLIP1-SLFN12L CLIP1 chr12 122836064 SLFN12L chr17 33825606 Exonic hg19 NA BF091853 Out-of-frame Inter-chr q24.31 q12 124966 ChimerSeq ChiTaRs ChiTaRs FNDC3A-MTHFD2 FNDC3A chr13 49766403 MTHFD2 chr2 74427581 Exonic hg19 NA AW837123 Out-of-frame Inter-chr q14.2 p13.1 124967 ChimerSeq ChiTaRs ChiTaRs IGF1R-BBX IGF1R chr15 99264092 BBX chr3 107370186 Exonic hg19 NA AW992173 Out-of-frame Inter-chr q26.3 TK:InsR Oncogene q13.12 Transcription factor 124968 ChimerSeq ChiTaRs ChiTaRs IRX3-IRX3 IRX3 chr16 54317637 IRX3 chr16 54317697 Exonic hg19 NA BU608343 Out-of-frame Intra-chr q12.2 Transcription factor q12.2 Transcription factor 124969 ChimerSeq ChiTaRs ChiTaRs IQCH-IQCH IQCH chr15 67713764 IQCH chr15 67692503 Exonic hg19 NA BE079513 Out-of-frame Intra-chr q23 q23 124970 ChimerSeq ChiTaRs ChiTaRs LOC284260-LOC284260 LOC284260 chr18 40210659 LOC284260 chr18 40199436 Exonic hg19 NA BU533493 Out-of-frame Intra-chr 124971 ChimerSeq ChiTaRs ChiTaRs MAPK1IP1L-MAPK1IP1L MAPK1IP1L chr14 55532934 MAPK1IP1L chr14 55532450 Exonic hg19 NA AI479293 Out-of-frame Intra-chr q22.3 q22.3 124972 ChimerSeq ChiTaRs ChiTaRs NFATC1-NFATC1 NFATC1 chr18 77171063 NFATC1 chr18 77171050 Exonic hg19 NA BQ710263 Out-of-frame Intra-chr q23 Transcription factor q23 Transcription factor 124973 ChimerSeq ChiTaRs ChiTaRs OSBPL8-OSBPL8 OSBPL8 chr12 76901448 OSBPL8 chr12 76901201 Exonic hg19 NA W16453 Out-of-frame Intra-chr q21.2 q21.2 124974 ChimerSeq ChiTaRs ChiTaRs SCAMP5-KLF4 SCAMP5 chr15 75313394 KLF4 chr9 110247133 Exonic hg19 NA AK026253 Out-of-frame Inter-chr q24.2 q31.2 Oncogene Tumor suppressor gene Transcription factor 124975 ChimerSeq ChiTaRs ChiTaRs AES-AES AES chr19 3061198 AES chr19 3053827 Exonic hg19 NA BG774193 Out-of-frame Intra-chr p13.3 p13.3 124976 ChimerSeq ChiTaRs ChiTaRs SMAD7-SMAD7 SMAD7 chr18 46474809 SMAD7 chr18 46447990 Exonic hg19 NA AW961693 Out-of-frame Intra-chr q21.1 q21.1 124977 ChimerSeq ChiTaRs ChiTaRs DDX24-EPC1 DDX24 chr14 94517450 EPC1 chr10 32576153 Exonic hg19 NA BE717493 Out-of-frame Inter-chr p11.22 124978 ChimerSeq ChiTaRs ChiTaRs ACSS1-ZNF131 ACSS1 chr20 24987837 ZNF131 chr5 43175422 Exonic hg19 NA BF790853 Out-of-frame Inter-chr p11.21 p12 Transcription factor 124979 ChimerSeq ChiTaRs ChiTaRs PEX5-CEP192 PEX5 chr12 7371170 CEP192 chr18 13124629 Exonic hg19 NA AA972423 Out-of-frame Inter-chr p13.31 p11.21 124980 ChimerSeq ChiTaRs ChiTaRs WWOX-ATP11A WWOX chr16 78534498 ATP11A chr13 113464622 Exonic hg19 NA BF873333 Out-of-frame Inter-chr q23.1 Tumor suppressor gene q34 124981 ChimerSeq ChiTaRs ChiTaRs CAPS-CCNG2 CAPS chr19 5916529 CCNG2 chr4 78079686 Exonic hg19 NA AA570323 Out-of-frame Inter-chr p13.3 q21.1 124982 ChimerSeq ChiTaRs ChiTaRs NEAT1-NEAT1 NEAT1 chr11 65197258 NEAT1 chr11 65197610 Exonic hg19 NA BE076963 Out-of-frame Intra-chr q13.1 q13.1 124983 ChimerSeq ChiTaRs ChiTaRs SETD6-CTIF SETD6 chr16 58554139 CTIF chr18 46094460 Exonic hg19 NA DB308733 Out-of-frame Inter-chr q21 124984 ChimerSeq ChiTaRs ChiTaRs DPP9-DPP9 DPP9 chr19 4694800 DPP9 chr19 4695388 Exonic hg19 NA BE938073 Out-of-frame Intra-chr p13.3 p13.3 124985 ChimerSeq ChiTaRs ChiTaRs NQO1-XRN1 NQO1 chr16 69744518 XRN1 chr3 142053702 Exonic hg19 NA DB537013 Out-of-frame Inter-chr q22.1 q23 124986 ChimerSeq ChiTaRs ChiTaRs TSPAN16-AHNAK TSPAN16 chr19 11433505 AHNAK chr11 62286790 Exonic hg19 NA BE008423 Out-of-frame Inter-chr p13.2 q12.3 Tumor suppressor gene 124987 ChimerSeq ChiTaRs ChiTaRs ISCU-ISCU ISCU chr12 108963144 ISCU chr12 108962889 Exonic hg19 NA CA311753 Out-of-frame Intra-chr q23.3 q23.3 124988 ChimerSeq ChiTaRs ChiTaRs AP2A1-TOLLIP AP2A1 chr19 50284625 TOLLIP chr11 1310053 Exonic hg19 NA BI053763 Out-of-frame Inter-chr q13.33 p15.5 124989 ChimerSeq ChiTaRs ChiTaRs FAM19A5-UBE3B FAM19A5 chr22 49090610 UBE3B chr12 109954956 Exonic hg19 NA BE066493 Out-of-frame Inter-chr q13.32 q24.11 124990 ChimerSeq ChiTaRs ChiTaRs PRR4-NR2C2 PRR4 chr12 11002074 NR2C2 chr3 15085821 Exonic hg19 NA DB194933 Out-of-frame Inter-chr p25.1 Tumor suppressor gene Transcription factor 124991 ChimerSeq ChiTaRs ChiTaRs VEZF1-VEZF1 VEZF1 chr17 56049104 VEZF1 chr17 56049126 Exonic hg19 NA CA944833 Out-of-frame Intra-chr q22 Transcription factor q22 Transcription factor 124992 ChimerSeq ChiTaRs ChiTaRs XPO6-NCOA3 XPO6 chr16 28164073 NCOA3 chr20 46265422 Exonic hg19 NA BE832543 Out-of-frame Inter-chr p12.1 q13.12 Transcription factor 124993 ChimerSeq ChiTaRs ChiTaRs ZSWIM1-ZSWIM1 ZSWIM1 chr20 44513720 ZSWIM1 chr20 44511682 Exonic hg19 NA AW025863 Out-of-frame Intra-chr q13.12 q13.12 124994 ChimerSeq ChiTaRs ChiTaRs CALR-CALR CALR chr19 13055301 CALR chr19 13050369 Exonic hg19 NA N39173 Out-of-frame Intra-chr p13.13 p13.13 124995 ChimerSeq ChiTaRs ChiTaRs ETV6-TAOK1 ETV6 chr12 11905514 TAOK1 chr17 27861105 Exonic hg19 NA JN603181 Out-of-frame Inter-chr p13.2 Tumor suppressor gene Transcription factor q11.2 124996 ChimerSeq ChiTaRs ChiTaRs PACSIN2-MIR100HG PACSIN2 chr22 43343285 MIR100HG chr11 122204008 Exonic hg19 NA BI054573 Out-of-frame Inter-chr q13.2 q24.1 124997 ChimerSeq ChiTaRs ChiTaRs LACTB-GTF3C3 LACTB chr15 63423669 GTF3C3 chr2 197630765 Exonic hg19 NA AW301723 Out-of-frame Inter-chr q22.2 q33.1 124998 ChimerSeq ChiTaRs ChiTaRs SERINC3-SERINC3 SERINC3 chr20 43129046 SERINC3 chr20 43129845 Exonic hg19 NA CA842753 Out-of-frame Intra-chr q13.12 q13.12 124999 ChimerSeq ChiTaRs ChiTaRs ATAD5-MN1 ATAD5 chr17 29160560 MN1 chr22 28156876 Exonic hg19 NA AI024583 Out-of-frame Inter-chr q11.2 q12.1 Oncogene 125000 ChimerSeq ChiTaRs ChiTaRs ELL-R3HCC1 ELL chr19 18603527 R3HCC1 chr8 23147919 Exonic hg19 NA BF875643 Out-of-frame Inter-chr p13.11 p21.3 125001 ChimerSeq ChiTaRs ChiTaRs HSBP1-HSBP1 HSBP1 chr16 83846276 HSBP1 chr16 83846137 Exonic hg19 NA AA747373 Out-of-frame Intra-chr q23.3 q23.3 125002 ChimerSeq ChiTaRs ChiTaRs VPS35-VPS35 VPS35 chr16 46696312 VPS35 chr16 46696176 Exonic hg19 NA BQ291823 Out-of-frame Intra-chr q11.2 q11.2 125003 ChimerSeq ChiTaRs ChiTaRs TSEN54-C11orf49 TSEN54 chr17 73520815 C11orf49 chr11 46958302 Exonic hg19 NA BE856783 Out-of-frame Inter-chr q25.1 p11.2 125004 ChimerSeq ChiTaRs ChiTaRs TCF25-MT1A TCF25 chr16 89977787 MT1A chr16 56659695 Exonic hg19 NA CB115063 Out-of-frame Intra-chr q24.3 q13 125005 ChimerSeq ChiTaRs ChiTaRs TLE3-MLKL TLE3 chr15 70344732 MLKL chr16 74729204 Exonic hg19 NA BF895963 Out-of-frame Inter-chr q23 q23.1 TKL:TKL-Unique 125006 ChimerSeq ChiTaRs ChiTaRs CES4A-AKT2 CES4A chr16 67043557 AKT2 chr19 40773373 Exonic hg19 NA BF950673 Out-of-frame Inter-chr q22.1 q13.2 AGC:Akt Oncogene 125007 ChimerSeq ChiTaRs ChiTaRs TAGLN-TAGLN TAGLN chr11 117075360 TAGLN chr11 117075355 Exonic hg19 NA AJ707033 Out-of-frame Intra-chr q23.3 Tumor suppressor gene q23.3 Tumor suppressor gene 125008 ChimerSeq ChiTaRs ChiTaRs ADARB1-ADARB1 ADARB1 chr21 46622953 ADARB1 chr21 46619993 Exonic hg19 NA BI053543 Out-of-frame Intra-chr q22.3 Tumor suppressor gene q22.3 Tumor suppressor gene 125009 ChimerSeq ChiTaRs ChiTaRs GLYR1-ELAVL4 GLYR1 chr16 4896211 ELAVL4 chr1 50539308 Exonic hg19 NA BC003693 CDS-5'UTR Inter-chr p13.3 Transcription factor p33 125010 ChimerSeq ChiTaRs ChiTaRs ADCY9-CTDSPL ADCY9 chr16 4159539 CTDSPL chr3 38025332 Exonic hg19 NA BF854283 Out-of-frame Inter-chr p13.3 p22.2 Tumor suppressor gene 125011 ChimerSeq ChiTaRs ChiTaRs DDX27-DDX27 DDX27 chr20 47858499 DDX27 chr20 47846757 Exonic hg19 NA BE254393 Out-of-frame Intra-chr q13.13 q13.13 125012 ChimerSeq ChiTaRs ChiTaRs SLC25A1-JUN SLC25A1 chr22 19165347 JUN chr1 59249452 Exonic hg19 NA CD614313 Out-of-frame Inter-chr q11.21 p32.1 Oncogene Transcription factor 125013 ChimerSeq ChiTaRs ChiTaRs ATXN1L-CSF2RB ATXN1L chr16 71898951 CSF2RB chr22 37319284 Exonic hg19 NA BF884753 Out-of-frame Inter-chr q22.2 q12.3 125014 ChimerSeq ChiTaRs ChiTaRs TRBV20-1-RPL23A TRBV20-1 chr16 2014652 RPL23A chr17 27047723 Exonic hg19 NA BC007583 Out-of-frame Inter-chr q11.2 125015 ChimerSeq ChiTaRs ChiTaRs FHOD3-FHOD3 FHOD3 chr18 34358917 FHOD3 chr18 34358928 Exonic hg19 NA BI027853 Out-of-frame Intra-chr q12.2 q12.2 125016 ChimerSeq ChiTaRs ChiTaRs SPPL2B-SPPL2B SPPL2B chr19 2342098 SPPL2B chr19 2341673 Exonic hg19 NA BE938643 Out-of-frame Intra-chr p13.3 p13.3 125017 ChimerSeq ChiTaRs ChiTaRs EIF4B-TNNC1 EIF4B chr12 53408728 TNNC1 chr3 52486122 Exonic hg19 NA BG213873 Out-of-frame Inter-chr q13.13 p21.1 125018 ChimerSeq ChiTaRs ChiTaRs BICD1-COG5 BICD1 chr12 32481718 COG5 chr7 106844960 Exonic hg19 NA AW751663 Out-of-frame Inter-chr p11.21 125019 ChimerSeq ChiTaRs ChiTaRs RFX7-RFX7 RFX7 chr15 56471862 RFX7 chr15 56471872 Exonic hg19 NA BF907253 Out-of-frame Intra-chr q21.3 Transcription factor q21.3 Transcription factor 125020 ChimerSeq ChiTaRs ChiTaRs PRR12-NAA10 PRR12 chr19 50129141 NAA10 chrX 153195614 Exonic hg19 NA CN431703 Out-of-frame Inter-chr q13.33 Transcription factor q28 125021 ChimerSeq ChiTaRs ChiTaRs MYH9-SERPINA1 MYH9 chr22 36677537 SERPINA1 chr14 94847271 Exonic hg19 NA BQ181873 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene q32.13 125022 ChimerSeq ChiTaRs ChiTaRs MLLT6-RRNAD1 MLLT6 chr17 36876272 RRNAD1 chr1 156699284 Exonic hg19 NA BQ630893 Out-of-frame Inter-chr q12 q23.1 125023 ChimerSeq ChiTaRs ChiTaRs BACH1-GSPT1 BACH1 chr21 30715699 GSPT1 chr16 11969612 Exonic hg19 NA BE814683 Out-of-frame Inter-chr q21.3 Transcription factor p13.13 125024 ChimerSeq ChiTaRs ChiTaRs EDC3-EDC3 EDC3 chr15 74925601 EDC3 chr15 74925607 Exonic hg19 NA BE095213 Out-of-frame Intra-chr q24.1 q24.1 125025 ChimerSeq ChiTaRs ChiTaRs RIN2-SYT17 RIN2 chr20 19982482 SYT17 chr16 19186455 Exonic hg19 NA BI002773 Out-of-frame Inter-chr p11.23 p12.3 125026 ChimerSeq ChiTaRs ChiTaRs SYNE2-NAPEPLD SYNE2 chr14 64519712 NAPEPLD chr7 102741245 Exonic hg19 NA AW753213 Out-of-frame Inter-chr q23.2 Tumor suppressor gene 125027 ChimerSeq ChiTaRs ChiTaRs CHD4-PRELP CHD4 chr12 6710130 PRELP chr1 203452442 Exonic hg19 NA BF986263 Out-of-frame Inter-chr p13.31 q32.1 125028 ChimerSeq ChiTaRs ChiTaRs XPO6-XPO6 XPO6 chr16 28110198 XPO6 chr16 28111955 Exonic hg19 NA AA643733 Out-of-frame Intra-chr p12.1 p12.1 125029 ChimerSeq ChiTaRs ChiTaRs CSTB-TMEM147 CSTB chr21 45196160 TMEM147 chr19 36037464 Exonic hg19 NA BQ691473 Out-of-frame Inter-chr q22.3 q13.12 125030 ChimerSeq ChiTaRs ChiTaRs SCAF11-RNF145 SCAF11 chr12 46316831 RNF145 chr5 158622398 Exonic hg19 NA BP396283 Out-of-frame Inter-chr q12 q33.3 125031 ChimerSeq ChiTaRs ChiTaRs PSG9-SCAMP2 PSG9 chr19 43772203 SCAMP2 chr15 75144138 Exonic hg19 NA BG007323 Out-of-frame Inter-chr q13.31 q24.1 125032 ChimerSeq ChiTaRs ChiTaRs PLEKHM1-KCNN4 PLEKHM1 chr17 146703 KCNN4 chr19 44270689 Exonic hg19 NA AW953723 Out-of-frame Inter-chr q13.31 125033 ChimerSeq ChiTaRs ChiTaRs SLC7A5-ZNF76 SLC7A5 chr16 87863774 ZNF76 chr6 35263501 Exonic hg19 NA BQ377733 Out-of-frame Inter-chr q24.2 p21.31 Transcription factor 125034 ChimerSeq ChiTaRs ChiTaRs PIK3R2-CRYBA2 PIK3R2 chr19 18285922 CRYBA2 chr2 219854912 Exonic hg19 NA BP385893 Out-of-frame Inter-chr p13.11 Oncogene q35 125035 ChimerSeq ChiTaRs ChiTaRs RIN3-RIN3 RIN3 chr14 93155297 RIN3 chr14 93142869 Exonic hg19 NA BM707843 Out-of-frame Intra-chr q32.12 q32.12 125036 ChimerSeq ChiTaRs ChiTaRs SPAG7-SPAG7 SPAG7 chr17 4870559 SPAG7 chr17 4871056 Exonic hg19 NA BX507103 Out-of-frame Intra-chr p13.2 p13.2 125037 ChimerSeq ChiTaRs ChiTaRs KIF21A-PAIP2B KIF21A chr12 39809592 PAIP2B chr2 71450823 Exonic hg19 NA BF920813 Out-of-frame Inter-chr q12 p13.3 125038 ChimerSeq ChiTaRs ChiTaRs SRSF1-SRSF1 SRSF1 chr17 56081628 SRSF1 chr17 56081238 Exonic hg19 NA BF996053 Out-of-frame Intra-chr q22 q22 125039 ChimerSeq ChiTaRs ChiTaRs STAT3-STAT3 STAT3 chr17 40538041 STAT3 chr17 40532338 Exonic hg19 NA AW771913 Out-of-frame Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q21.2 Oncogene Tumor suppressor gene Transcription factor 125040 ChimerSeq ChiTaRs ChiTaRs ZNF280D-ZNF280D ZNF280D chr15 56923766 ZNF280D chr15 56923144 Exonic hg19 NA CK429383 Out-of-frame Intra-chr q21.3 Transcription factor q21.3 Transcription factor 125041 ChimerSeq ChiTaRs ChiTaRs DTWD1-DTWD1 DTWD1 chr15 49916250 DTWD1 chr15 49915407 Exonic hg19 NA AW103673 Out-of-frame Intra-chr q21.2 q21.2 125042 ChimerSeq ChiTaRs ChiTaRs SPAG9-RHBDD1 SPAG9 chr17 49124207 RHBDD1 chr2 227702785 Exonic hg19 NA DA315303 Out-of-frame Inter-chr q21.33 q36.3 125043 ChimerSeq ChiTaRs ChiTaRs ABHD2-ABHD2 ABHD2 chr15 89635872 ABHD2 chr15 89639156 Exonic hg19 NA AW853203 Out-of-frame Intra-chr q26.1 q26.1 125044 ChimerSeq ChiTaRs ChiTaRs RPAIN-COL3A1 RPAIN chr17 5336387 COL3A1 chr2 189849610 Exonic hg19 NA AI807903 Out-of-frame Inter-chr p13.2 q32.2 125045 ChimerSeq ChiTaRs ChiTaRs MED15-TRIM40 MED15 chr22 20928959 TRIM40 chr6 1445388 Exonic hg19 NA BF991563 Out-of-frame Inter-chr q11.21 125046 ChimerSeq ChiTaRs ChiTaRs ADAMTS1-ADAMTS1 ADAMTS1 chr21 28209665 ADAMTS1 chr21 28212832 Exonic hg19 NA AL355723 Out-of-frame Intra-chr q21.3 q21.3 125047 ChimerSeq ChiTaRs ChiTaRs KIAA1468-KIAA1468 KIAA1468 chr18 59973191 KIAA1468 chr18 59972757 Exonic hg19 NA BU674543 Out-of-frame Intra-chr q21.33 q21.33 125048 ChimerSeq ChiTaRs ChiTaRs BATF2-ACTG2 BATF2 chr11 64764442 ACTG2 chr2 74120141 Exonic hg19 NA BG982943 Out-of-frame Inter-chr q13.1 Tumor suppressor gene Transcription factor p13.1 125049 ChimerSeq ChiTaRs ChiTaRs FTL-CXCR4 FTL chr19 49468728 CXCR4 chr2 136871925 Exonic hg19 NA CD101873 Out-of-frame Inter-chr q13.33 q22.1 125050 ChimerSeq ChiTaRs ChiTaRs COL1A1-ARHGAP26 COL1A1 chr17 48262903 ARHGAP26 chr5 142193690 Exonic hg19 NA BM672053 Out-of-frame Inter-chr q21.33 Oncogene q31.3 125051 ChimerSeq ChiTaRs ChiTaRs REXO1-REXO1 REXO1 chr19 1831075 REXO1 chr19 1830673 Exonic hg19 NA AW842013 Out-of-frame Intra-chr p13.3 p13.3 125052 ChimerSeq ChiTaRs ChiTaRs KCTD15-KCTD15 KCTD15 chr19 34303806 KCTD15 chr19 34306060 Exonic hg19 NA AA972393 Out-of-frame Intra-chr q13.11 q13.11 125053 ChimerSeq ChiTaRs ChiTaRs IGSF9B-ARHGEF10L IGSF9B chr11 133816101 ARHGEF10L chr1 17961459 Exonic hg19 NA BF921553 Out-of-frame Inter-chr q25 p36.13 125054 ChimerSeq ChiTaRs ChiTaRs CHD3-CHD3 CHD3 chr17 7797510 CHD3 chr17 7797196 Exonic hg19 NA BF932643 Out-of-frame Intra-chr p13.1 p13.1 125055 ChimerSeq ChiTaRs ChiTaRs DOCK6-DOCK6 DOCK6 chr19 11322695 DOCK6 chr19 11311050 Exonic hg19 NA BF847503 Out-of-frame Intra-chr p13.2 p13.2 125056 ChimerSeq ChiTaRs ChiTaRs SERPINA1-ALDOB SERPINA1 chr14 94849463 ALDOB chr9 104188898 Exonic hg19 NA AI133003 Out-of-frame Inter-chr q32.13 q31.1 125057 ChimerSeq ChiTaRs ChiTaRs MEG3-MEG3 MEG3 chr14 101295505 MEG3 chr14 101295506 Exonic hg19 NA BF994603 Out-of-frame Intra-chr q32.2 Tumor suppressor gene q32.2 Tumor suppressor gene 125058 ChimerSeq ChiTaRs ChiTaRs SHANK2-TFDP1 SHANK2 chr11 70421912 TFDP1 chr13 114240392 Exonic hg19 NA CA976123 Out-of-frame Inter-chr q13.4 q34 Transcription factor 125059 ChimerSeq ChiTaRs ChiTaRs ZNF559-OXR1 ZNF559 chr19 9451840 OXR1 chr8 107750239 Exonic hg19 NA BG534933 Out-of-frame Inter-chr p13.2 Transcription factor q23.1 125060 ChimerSeq ChiTaRs ChiTaRs HELZ-PTPRN HELZ chr17 65149848 PTPRN chr2 220154345 Exonic hg19 NA BP389573 Out-of-frame Inter-chr q24.2 q35 125061 ChimerSeq ChiTaRs ChiTaRs RAD51B-RAD51B RAD51B chr14 69076064 RAD51B chr14 69075010 Exonic hg19 NA CV375773 Out-of-frame Intra-chr q24.1 q24.1 125062 ChimerSeq ChiTaRs ChiTaRs GLG1-GLG1 GLG1 chr16 74525115 GLG1 chr16 74511358 Exonic hg19 NA CB122593 Out-of-frame Intra-chr q23.1 q23.1 125063 ChimerSeq ChiTaRs ChiTaRs GNA13-PHF21A GNA13 chr17 63039408 PHF21A chr11 46105639 Exonic hg19 NA AI803563 Out-of-frame Inter-chr q24.1 p11.2 Transcription factor 125064 ChimerSeq ChiTaRs ChiTaRs PPDPF-HNRNPD PPDPF chr20 62153092 HNRNPD chr4 83278003 Exonic hg19 NA BF805263 Out-of-frame Inter-chr q13.33 q21.22 125065 ChimerSeq ChiTaRs ChiTaRs CLEC16A-NBAS CLEC16A chr16 11102571 NBAS chr2 15315355 Exonic hg19 NA BQ380493 Out-of-frame Inter-chr p13.13 p24.3 125066 ChimerSeq ChiTaRs ChiTaRs C11orf57-C11orf57 C11orf57 chr11 111955664 C11orf57 chr11 111955661 Exonic hg19 NA AI357473 Out-of-frame Intra-chr q23.1 q23.1 125067 ChimerSeq ChiTaRs ChiTaRs SLC16A13-JOSD1 SLC16A13 chr17 6940383 JOSD1 chr22 39081622 Exonic hg19 NA BX538323 Out-of-frame Inter-chr p13.1 q13.1 125068 ChimerSeq ChiTaRs ChiTaRs CARKD-CREBBP CARKD chr13 111291930 CREBBP chr16 3830869 Exonic hg19 NA BI049383 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene 125069 ChimerSeq ChiTaRs ChiTaRs ZNF771-LIMD2 ZNF771 chr16 30428943 LIMD2 chr17 61774165 Exonic hg19 NA BF510983 Out-of-frame Inter-chr p11.2 Transcription factor q23.3 125070 ChimerSeq ChiTaRs ChiTaRs ANKRD11-FAU ANKRD11 chr16 89348995 FAU chr11 64888108 Exonic hg19 NA CN275873 Out-of-frame Inter-chr q24.3 q13.1 125071 ChimerSeq ChiTaRs ChiTaRs CRIP2-NAP1L4 CRIP2 chr14 105946497 NAP1L4 chr11 2965723 Exonic hg19 NA AI766823 Out-of-frame Inter-chr q32.33 125072 ChimerSeq ChiTaRs ChiTaRs NAE1-ARID1B NAE1 chr16 66855464 ARID1B chr6 157238817 Exonic hg19 NA BG003563 Out-of-frame Inter-chr q22.1 q25.3 Oncogene 125073 ChimerSeq ChiTaRs ChiTaRs NBEA-RANBP6 NBEA chr13 35827308 RANBP6 chr9 6013844 Exonic hg19 NA BU686613 Out-of-frame Inter-chr q13.3 p24.1 125074 ChimerSeq ChiTaRs ChiTaRs TMEM121-ZFC3H1 TMEM121 chr14 105995616 ZFC3H1 chr12 72033553 Exonic hg19 NA AA923783 Out-of-frame Inter-chr q32.33 q21.1 125075 ChimerSeq ChiTaRs ChiTaRs SRSF1-PCNX SRSF1 chr17 56084604 PCNX chr14 71543060 Exonic hg19 NA BP270723 Out-of-frame Inter-chr q22 125076 ChimerSeq ChiTaRs ChiTaRs GAB2-PXN GAB2 chr11 77930196 PXN chr12 120662018 Exonic hg19 NA BF911013 Out-of-frame Inter-chr q14.1 q24.23 125077 ChimerSeq ChiTaRs ChiTaRs RPLP0-NDUFA13 RPLP0 chr12 120635175 NDUFA13 chr19 19627052 Exonic hg19 NA AF132973 Out-of-frame Inter-chr q24.23 p13.11 125078 ChimerSeq ChiTaRs ChiTaRs WDR83-DHPS WDR83 chr19 12786856 DHPS chr19 12790971 Exonic hg19 NA BQ436553 Out-of-frame Intra-chr p13.13 p13.13 125079 ChimerSeq ChiTaRs ChiTaRs DCN-MAGI1 DCN chr12 91571469 MAGI1 chr3 65352758 Exonic hg19 NA AA736813 Out-of-frame Inter-chr q21.33 Tumor suppressor gene Oncogene 125080 ChimerSeq ChiTaRs ChiTaRs DLGAP1-TRAM2 DLGAP1 chr18 3804920 TRAM2 chr6 52430465 Exonic hg19 NA BF362333 Out-of-frame Inter-chr p11.31 p12.2 125081 ChimerSeq ChiTaRs ChiTaRs MED1-HPCAL4 MED1 chr17 37565638 HPCAL4 chr1 40144655 Exonic hg19 NA H21133 Out-of-frame Inter-chr q12 Tumor suppressor gene p34.2 125082 ChimerSeq ChiTaRs ChiTaRs SMAD4-SMAD4 SMAD4 chr18 48605236 SMAD4 chr18 48605212 Exonic hg19 NA AL043883 Out-of-frame Intra-chr q21.2 Oncogene Tumor suppressor gene Transcription factor q21.2 Oncogene Tumor suppressor gene Transcription factor 125083 ChimerSeq ChiTaRs ChiTaRs NRG4-SCAPER NRG4 chr15 76304670 SCAPER chr15 76673772 Exonic hg19 NA BM756023 Out-of-frame Intra-chr q24.2 q24.3 125084 ChimerSeq ChiTaRs ChiTaRs ATP5E-HBS1L ATP5E chr20 57603875 HBS1L chr6 135292730 Exonic hg19 NA DB352473 Out-of-frame Inter-chr q13.32 q23.3 125085 ChimerSeq ChiTaRs ChiTaRs KTN1-KTN1 KTN1 chr14 56150990 KTN1 chr14 56139705 Exonic hg19 NA BU676913 Out-of-frame Intra-chr q22.3 q22.3 125086 ChimerSeq ChiTaRs ChiTaRs DDA1-RPS8 DDA1 chr19 17431920 RPS8 chr1 45242583 Exonic hg19 NA BQ082553 Out-of-frame Inter-chr p13.11 p34.1 125087 ChimerSeq ChiTaRs ChiTaRs KTN1-KTN1 KTN1 chr14 56079104 KTN1 chr14 56085930 Exonic hg19 NA AI760393 Out-of-frame Intra-chr q22.3 q22.3 125088 ChimerSeq ChiTaRs ChiTaRs CCDC103-NCALD CCDC103 chr17 42982187 NCALD chr8 102698967 Exonic hg19 NA AF131813 Out-of-frame Inter-chr q21.31 q22.3 125089 ChimerSeq ChiTaRs ChiTaRs NDUFAB1-ROMO1 NDUFAB1 chr16 23607779 ROMO1 chr20 34287648 Exonic hg19 NA CN366593 Out-of-frame Inter-chr p12.2 q11.22 125090 ChimerSeq ChiTaRs ChiTaRs PRH1-PRR4-PRRC2C PRH1-PRR4 chr12 11185704 PRRC2C chr1 171460584 Exonic hg19 NA CV345293 Out-of-frame Inter-chr q24.3 125091 ChimerSeq ChiTaRs ChiTaRs AQP4-AQP4 AQP4 chr18 24436252 AQP4 chr18 24435347 Exonic hg19 NA BF055033 Out-of-frame Intra-chr q11.2 q11.2 125092 ChimerSeq ChiTaRs ChiTaRs FSIP1-FSIP1 FSIP1 chr15 40021969 FSIP1 chr15 40030376 Exonic hg19 NA BI044443 Out-of-frame Intra-chr q14 q14 125093 ChimerSeq ChiTaRs ChiTaRs ARHGDIB-ARHGDIB ARHGDIB chr12 15095768 ARHGDIB chr12 15095458 Exonic hg19 NA BF895713 Out-of-frame Intra-chr p12.3 p12.3 125094 ChimerSeq ChiTaRs ChiTaRs SLC35E3-SLC35E3 SLC35E3 chr12 69153957 SLC35E3 chr12 69157482 Exonic hg19 NA AI918753 Out-of-frame Intra-chr q15 q15 125095 ChimerSeq ChiTaRs ChiTaRs UBA52-UBA52 UBA52 chr19 18685954 UBA52 chr19 18685951 Exonic hg19 NA AW270263 Out-of-frame Intra-chr p13.11 p13.11 125096 ChimerSeq ChiTaRs ChiTaRs MARS-MARS MARS chr12 57905627 MARS chr12 57905855 Exonic hg19 NA AW410123 Out-of-frame Intra-chr q13.3 q13.3 125097 ChimerSeq ChiTaRs ChiTaRs ATM-ASPH ATM chr11 108106442 ASPH chr8 62414840 Exonic hg19 NA CB269353 Out-of-frame Inter-chr q22.3 Atypical:PIKK Oncogene Tumor suppressor gene q12.3 125098 ChimerSeq ChiTaRs ChiTaRs PAPOLA-AK7 PAPOLA chr14 96968938 AK7 chr14 96904172 Exonic hg19 NA BU944613 Out-of-frame Intra-chr q32.2 q32.2 Seq+ 125099 ChimerSeq ChiTaRs ChiTaRs TAF4-TAF4 TAF4 chr20 60585315 TAF4 chr20 60583032 Exonic hg19 NA BQ318943 Out-of-frame Intra-chr 125100 ChimerSeq ChiTaRs ChiTaRs TAF1D-TAF1D TAF1D chr11 93469441 TAF1D chr11 93466253 Exonic hg19 NA BE702393 Out-of-frame Intra-chr q21 q21 125101 ChimerSeq ChiTaRs ChiTaRs DAZAP1-DAZAP1 DAZAP1 chr19 1418697 DAZAP1 chr19 1429639 Exonic hg19 NA BF932473 Out-of-frame Intra-chr p13.3 p13.3 125102 ChimerSeq ChiTaRs ChiTaRs CBX5-ZSCAN5A CBX5 chr12 54629788 ZSCAN5A chr19 56767576 Exonic hg19 NA BU181183 Out-of-frame Inter-chr q13.13 Tumor suppressor gene q13.43 Transcription factor 125103 ChimerSeq ChiTaRs ChiTaRs HERC2-TBCE HERC2 chr15 28561395 TBCE chr1 235534680 Exonic hg19 NA CF123263 Out-of-frame Inter-chr 125104 ChimerSeq ChiTaRs ChiTaRs ZSCAN5A-TESK1 ZSCAN5A chr19 56802734 TESK1 chr9 35608434 Exonic hg19 NA BG982433 Out-of-frame Inter-chr q13.43 Transcription factor p13.3 TKL:LISK 125105 ChimerSeq ChiTaRs ChiTaRs BOLA2-BOLA2 BOLA2 chr16 30007171 BOLA2 chr16 30007337 Exonic hg19 NA AW366913 Out-of-frame Intra-chr p11.2 p11.2 125106 ChimerSeq ChiTaRs ChiTaRs BPTF-IL5RA BPTF chr17 65941906 IL5RA chr3 3120178 Exonic hg19 NA BF895873 Out-of-frame Inter-chr q24.2 Transcription factor p26.2 125107 ChimerSeq ChiTaRs ChiTaRs HDGFRP3-HDGFRP3 HDGFRP3 chr15 83876381 HDGFRP3 chr15 83826753 Exonic hg19 NA AW295523 Out-of-frame Intra-chr 125108 ChimerSeq ChiTaRs ChiTaRs THTPA-AP1G2 THTPA chr14 24027998 AP1G2 chr14 24033993 Exonic hg19 NA BQ365373 Out-of-frame Intra-chr q11.2 q11.2 125109 ChimerSeq ChiTaRs ChiTaRs UNC13A-UNC13A UNC13A chr19 17716638 UNC13A chr19 17715730 Exonic hg19 NA BG818743 Out-of-frame Intra-chr p13.11 p13.11 125110 ChimerSeq ChiTaRs ChiTaRs SAFB-SAFB SAFB chr19 5634661 SAFB chr19 5639747 Exonic hg19 NA BF376713 Out-of-frame Intra-chr p13.3 Tumor suppressor gene Transcription factor p13.3 Tumor suppressor gene Transcription factor 125111 ChimerSeq ChiTaRs ChiTaRs PPARA-AP2M1 PPARA chr22 46637811 AP2M1 chr3 183901431 Exonic hg19 NA AI079573 Out-of-frame Inter-chr q13.31 Tumor suppressor gene Transcription factor q27.1 125112 ChimerSeq ChiTaRs ChiTaRs LITAF-DBNL LITAF chr16 11643303 DBNL chr7 44085791 Exonic hg19 NA BE830303 Out-of-frame Inter-chr p13.13 Tumor suppressor gene p13 125113 ChimerSeq ChiTaRs ChiTaRs TRA@-ASAP1 TRA@ chr14 22938658 ASAP1 chr8 131426421 Exonic hg19 NA X13953 Out-of-frame Inter-chr q11.2 q24.22 125114 ChimerSeq ChiTaRs ChiTaRs LUC7L3-SP100 LUC7L3 chr17 48806271 SP100 chr2 231330447 Exonic hg19 NA AW364443 Out-of-frame Inter-chr q21.33 q37.1 Tumor suppressor gene Transcription factor 125115 ChimerSeq ChiTaRs ChiTaRs ARIH1-ARIH1 ARIH1 chr15 72877867 ARIH1 chr15 72878161 Exonic hg19 NA DB350003 Out-of-frame Intra-chr q24.1 q24.1 125116 ChimerSeq ChiTaRs ChiTaRs TTC19-NCOR1 TTC19 chr17 15930017 NCOR1 chr17 15935395 Exonic hg19 NA BU192483 Out-of-frame Intra-chr p12 p11.2 Oncogene 125117 ChimerSeq ChiTaRs ChiTaRs WARS-NFYC WARS chr14 100801304 NFYC chr1 41218892 Exonic hg19 NA S74703 Out-of-frame Inter-chr q32.2 p34.2 Transcription factor 125118 ChimerSeq ChiTaRs ChiTaRs MRPS34-ST6GAL1 MRPS34 chr16 1822162 ST6GAL1 chr3 186795577 Exonic hg19 NA AA973233 Out-of-frame Inter-chr p13.3 q27.3 125119 ChimerSeq ChiTaRs ChiTaRs C18orf25-NDRG1 C18orf25 chr18 43845243 NDRG1 chr8 134299794 Exonic hg19 NA BF748553 Out-of-frame Inter-chr q21.1 q24.22 Tumor suppressor gene 125120 ChimerSeq ChiTaRs ChiTaRs RPRD1A-WDR7 RPRD1A chr18 33647522 WDR7 chr18 54398612 Exonic hg19 NA DA106303 Out-of-frame Intra-chr q12.2 q21.31 125121 ChimerSeq ChiTaRs ChiTaRs PRC1-RCCD1 PRC1 chr15 91537765 RCCD1 chr15 91503128 Exonic hg19 NA DA657603 Out-of-frame Intra-chr q26.1 q26.1 125122 ChimerSeq ChiTaRs ChiTaRs HCK-ENG HCK chr20 30669789 ENG chr9 130588650 Exonic hg19 NA BI026773 Out-of-frame Inter-chr q11.21 TK:Src q34.11 125123 ChimerSeq ChiTaRs ChiTaRs TCF3-TCF3 TCF3 chr19 1627299 TCF3 chr19 1622482 Exonic hg19 NA AA773093 Out-of-frame Intra-chr p13.3 Oncogene Tumor suppressor gene Transcription factor p13.3 Oncogene Tumor suppressor gene Transcription factor 125124 ChimerSeq ChiTaRs ChiTaRs INSR-MYADM INSR chr19 7215997 MYADM chr19 54377996 Exonic hg19 NA BF854183 Out-of-frame Intra-chr p13.2 TK:InsR q13.42 125125 ChimerSeq ChiTaRs ChiTaRs PRKCH-PMPCB PRKCH chr14 61814591 PMPCB chr7 102940672 Exonic hg19 NA BE929033 Out-of-frame Inter-chr q23.1 q22.1 125126 ChimerSeq ChiTaRs ChiTaRs LASP1-LASP1 LASP1 chr17 37076672 LASP1 chr17 37075916 Exonic hg19 NA BQ941743 Out-of-frame Intra-chr q12 q12 125127 ChimerSeq ChiTaRs ChiTaRs PITPNM2-KPNB1 PITPNM2 chr12 123585532 KPNB1 chr17 45754383 Exonic hg19 NA AW383373 Out-of-frame Inter-chr q24.31 q21.32 125128 ChimerSeq ChiTaRs ChiTaRs OIP5-AS1-SLC36A2 OIP5-AS1 chr15 41591279 SLC36A2 chr5 150713380 Exonic hg19 NA AI469343 Out-of-frame Inter-chr q15.1 q33.1 Tumor suppressor gene 125129 ChimerSeq ChiTaRs ChiTaRs APH1B-ERP29 APH1B chr15 63599775 ERP29 chr12 112460532 Exonic hg19 NA BP398723 Out-of-frame Inter-chr q22.2 q24.13 125130 ChimerSeq ChiTaRs ChiTaRs PRSS23-CANX PRSS23 chr11 86520225 CANX chr5 179156721 Exonic hg19 NA CA448313 Out-of-frame Inter-chr q14.2 125131 ChimerSeq ChiTaRs ChiTaRs DSCR9-RAD21 DSCR9 chr21 38590467 RAD21 chr8 117869590 Exonic hg19 NA CD557703 Out-of-frame Inter-chr q22.13 q24.11 125132 ChimerSeq ChiTaRs ChiTaRs CHMP1A-CHMP1A CHMP1A chr16 89711292 CHMP1A chr16 89711291 Exonic hg19 NA BF798523 Out-of-frame Intra-chr q24.3 q24.3 125133 ChimerSeq ChiTaRs ChiTaRs GANC-GANC GANC chr15 42645864 GANC chr15 42645704 Exonic hg19 NA AW572233 3'UTR-CDS Intra-chr q15.1 q15.1 125134 ChimerSeq ChiTaRs ChiTaRs RPL36-SLC23A2 RPL36 chr19 5691678 SLC23A2 chr20 4833667 Exonic hg19 NA AI497603 3'UTR-3'UTR Inter-chr p13.3 p13 125135 ChimerSeq ChiTaRs ChiTaRs PDIA3-GALK2 PDIA3 chr15 44061776 GALK2 chr15 49599337 Exonic hg19 NA BF355333 Out-of-frame Intra-chr q15.3 q21.1 125136 ChimerSeq ChiTaRs ChiTaRs MAU2-ATP6V0E1 MAU2 chr19 19432634 ATP6V0E1 chr5 172461600 Exonic hg19 NA BI049643 Out-of-frame Inter-chr p13.11 q35.1 125137 ChimerSeq ChiTaRs ChiTaRs ZNF385C-LOC100272228 ZNF385C chr17 40183803 LOC100272228 chrX 149335611 Exonic hg19 NA DR008013 Out-of-frame Inter-chr q21.2 Transcription factor 125138 ChimerSeq ChiTaRs ChiTaRs PIGN-NUCKS1 PIGN chr18 59713318 NUCKS1 chr1 205715831 Exonic hg19 NA BQ366823 Out-of-frame Inter-chr q21.33 q32.1 125139 ChimerSeq ChiTaRs ChiTaRs SERINC3-RND2 SERINC3 chr20 43135579 RND2 chr17 41180187 Exonic hg19 NA BI037353 Out-of-frame Inter-chr q13.12 q21.31 125140 ChimerSeq ChiTaRs ChiTaRs FLI1-EWSR1 FLI1 chr11 128675063 EWSR1 chr22 29683875 Exonic hg19 NA JX266516 Out-of-frame Inter-chr q24.3 Oncogene Transcription factor q12.2 KB Pub 125141 ChimerSeq ChiTaRs ChiTaRs GOLGA3-ARL17A GOLGA3 chr12 133372544 ARL17A chr17 1181807 Exonic hg19 NA BC048203 Out-of-frame Inter-chr q24.33 q21.31 125142 ChimerSeq ChiTaRs ChiTaRs MDGA2-LOC100499227 MDGA2 chr14 47886001 LOC100499227 chr11 119290761 Exonic hg19 NA DA362393 Out-of-frame Inter-chr q21.3 125143 ChimerSeq ChiTaRs ChiTaRs CEP95-ARL15 CEP95 chr17 62528140 ARL15 chr5 53522390 Exonic hg19 NA AW857583 Out-of-frame Inter-chr q23.3 q11.2 125144 ChimerSeq ChiTaRs ChiTaRs GLTSCR2-NACA GLTSCR2 chr19 48260315 NACA chr12 57115016 Exonic hg19 NA BF439043 Out-of-frame Inter-chr Tumor suppressor gene q13.3 125145 ChimerSeq ChiTaRs ChiTaRs NFIC-C1orf186 NFIC chr19 3469152 C1orf186 chr1 206243898 Exonic hg19 NA AI624663 Out-of-frame Inter-chr p13.3 Transcription factor q32.1 125146 ChimerSeq ChiTaRs ChiTaRs PTTG1IP-DIP2C PTTG1IP chr21 46270527 DIP2C chr10 381126 Exonic hg19 NA BC021583 Out-of-frame Inter-chr q22.3 p15.3 125147 ChimerSeq ChiTaRs ChiTaRs SNRNP70-SNRNP70 SNRNP70 chr19 49611710 SNRNP70 chr19 49611779 Exonic hg19 NA BI054893 Out-of-frame Intra-chr q13.33 q13.33 125148 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65267546 MALAT1 chr11 65266564 Exonic hg19 NA DW408943 Out-of-frame Intra-chr q13.1 q13.1 125149 ChimerSeq ChiTaRs ChiTaRs SPRED1-SPRED1 SPRED1 chr15 38558563 SPRED1 chr15 38551729 Exonic hg19 NA AW898783 Out-of-frame Intra-chr q14 q14 125150 ChimerSeq ChiTaRs ChiTaRs NOL11-RRP9 NOL11 chr17 65717602 RRP9 chr3 51967445 Exonic hg19 NA CN302773 CDS-3'UTR Inter-chr q24.2 p21.2 125151 ChimerSeq ChiTaRs ChiTaRs SIN3B-SIN3B SIN3B chr19 16945267 SIN3B chr19 16945295 Exonic hg19 NA BF365213 Out-of-frame Intra-chr p13.11 p13.11 125152 ChimerSeq ChiTaRs ChiTaRs NCOA6-PPIL4 NCOA6 chr20 33335720 PPIL4 chr6 149836664 Exonic hg19 NA BF985843 Out-of-frame Inter-chr q11.22 q25.1 125153 ChimerSeq ChiTaRs ChiTaRs MTA1-MTA1 MTA1 chr14 105936993 MTA1 chr14 105936917 Exonic hg19 NA EC505603 Out-of-frame Intra-chr q32.33 q32.33 125154 ChimerSeq ChiTaRs ChiTaRs ACSS2-AMBRA1 ACSS2 chr20 33515240 AMBRA1 chr11 46614870 Exonic hg19 NA BF763653 Out-of-frame Inter-chr q11.22 p11.2 125155 ChimerSeq ChiTaRs ChiTaRs RAB31-BTN2A2 RAB31 chr18 9715194 BTN2A2 chr6 26383947 Exonic hg19 NA BG998433 Out-of-frame Inter-chr p11.22 p22.2 125156 ChimerSeq ChiTaRs ChiTaRs UGGT2-SLC26A2 UGGT2 chr13 96685524 SLC26A2 chr5 149362988 Exonic hg19 NA CV414163 Out-of-frame Inter-chr q32.1 q32 125157 ChimerSeq ChiTaRs ChiTaRs RCOR1-RCOR1 RCOR1 chr14 103134383 RCOR1 chr14 103134355 Exonic hg19 NA BE155913 Out-of-frame Intra-chr q32.31 q32.31 125158 ChimerSeq ChiTaRs ChiTaRs CCDC92-BDKRB2 CCDC92 chr12 124421131 BDKRB2 chr14 96707747 Exonic hg19 NA AA738243 Out-of-frame Inter-chr q32.2 125159 ChimerSeq ChiTaRs ChiTaRs EHD1-RUVBL1 EHD1 chr11 64621138 RUVBL1 chr3 127799803 Exonic hg19 NA BC004503 Out-of-frame Inter-chr q13.1 q21.3 125160 ChimerSeq ChiTaRs ChiTaRs DNMT3B-SYK DNMT3B chr20 31396615 SYK chr9 93657968 Exonic hg19 NA AW794433 Out-of-frame Inter-chr q11.21 Tumor suppressor gene q22.2 TK:Syk Oncogene Tumor suppressor gene 125161 ChimerSeq ChiTaRs ChiTaRs OSER1-PDCD11 OSER1 chr20 42835949 PDCD11 chr10 105175533 Exonic hg19 NA BE084803 Out-of-frame Inter-chr q13.12 q24.33 125162 ChimerSeq ChiTaRs ChiTaRs KRT5-PPP6R3 KRT5 chr12 52908785 PPP6R3 chr11 68291042 Exonic hg19 NA BI016103 Out-of-frame Inter-chr q13.13 q13.2 125163 ChimerSeq ChiTaRs ChiTaRs SIAE-SIAE SIAE chr11 124508484 SIAE chr11 124517366 Exonic hg19 NA BG956433 Out-of-frame Intra-chr q24.2 q24.2 125164 ChimerSeq ChiTaRs ChiTaRs SSH2-LCT SSH2 chr17 27995522 LCT chr2 136554299 Exonic hg19 NA BF929873 Out-of-frame Inter-chr q11.2 q21.3 125165 ChimerSeq ChiTaRs ChiTaRs YES1-DAGLB YES1 chr18 722514 DAGLB chr7 6501437 Exonic hg19 NA BE927703 Out-of-frame Inter-chr p11.32 p22.1 125166 ChimerSeq ChiTaRs ChiTaRs SEPW1-TSPO SEPW1 chr19 48282516 TSPO chr22 43558288 Exonic hg19 NA BG739843 Out-of-frame Inter-chr q13.2 125167 ChimerSeq ChiTaRs ChiTaRs COPS7A-GRINA COPS7A chr12 6841041 GRINA chr8 145064276 Exonic hg19 NA BC007843 3'UTR-5'UTR Inter-chr p13.31 q24.3 125168 ChimerSeq ChiTaRs ChiTaRs MYCBP2-ATG7 MYCBP2 chr13 77651470 ATG7 chr3 11598873 Exonic hg19 NA BF931523 Out-of-frame Inter-chr q22.3 p25.3 125169 ChimerSeq ChiTaRs ChiTaRs SYNGR2-TRIOBP SYNGR2 chr17 76167428 TRIOBP chr22 38159534 Exonic hg19 NA BG014553 Out-of-frame Inter-chr q25.3 q13.1 125170 ChimerSeq ChiTaRs ChiTaRs RBBP8-RBBP8 RBBP8 chr18 20573524 RBBP8 chr18 20573514 Exonic hg19 NA CA312983 Out-of-frame Intra-chr q11.2 Tumor suppressor gene q11.2 Tumor suppressor gene 125171 ChimerSeq ChiTaRs ChiTaRs SNAPC1-SNAPC1 SNAPC1 chr14 62259589 SNAPC1 chr14 62249048 Exonic hg19 NA BU685773 Out-of-frame Intra-chr q23.2 q23.2 125172 ChimerSeq ChiTaRs ChiTaRs MAP2K1-SLC48A1 MAP2K1 chr15 66746948 SLC48A1 chr12 48174615 Exonic hg19 NA BG285113 Out-of-frame Inter-chr q22.31 STE:STE7 Oncogene q13.11 125173 ChimerSeq ChiTaRs ChiTaRs NCOR1-RDX NCOR1 chr17 16055297 RDX chr11 110101812 Exonic hg19 NA AW373603 Out-of-frame Inter-chr p11.2 Oncogene q22.3 125174 ChimerSeq ChiTaRs ChiTaRs MYH9-MYH9 MYH9 chr22 36677375 MYH9 chr22 36677373 Exonic hg19 NA BG388513 Out-of-frame Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 Oncogene Tumor suppressor gene 125175 ChimerSeq ChiTaRs ChiTaRs NAP1L1-WHSC1 NAP1L1 chr12 76478465 WHSC1 chr4 1902353 Exonic hg19 NA DA779343 Out-of-frame Inter-chr q21.2 Oncogene 125176 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65271190 MALAT1 chr11 65270280 Exonic hg19 NA DW467313 Out-of-frame Intra-chr q13.1 q13.1 125177 ChimerSeq ChiTaRs ChiTaRs RPL23-C10orf137 RPL23 chr17 37009989 C10orf137 chr10 127408279 Exonic hg19 NA DB216263 Out-of-frame Inter-chr q12 125178 ChimerSeq ChiTaRs ChiTaRs MAPRE1-MAPRE1 MAPRE1 chr20 31430490 MAPRE1 chr20 31430559 Exonic hg19 NA AY752860 Out-of-frame Intra-chr q11.21 q11.21 125179 ChimerSeq ChiTaRs ChiTaRs PAPD5-PAPD5 PAPD5 chr16 50264496 PAPD5 chr16 50263862 Exonic hg19 NA DW421003 Out-of-frame Intra-chr q12.1 q12.1 125180 ChimerSeq ChiTaRs ChiTaRs PSTPIP2-KMO PSTPIP2 chr18 43563809 KMO chr1 241720809 Exonic hg19 NA AW451493 Out-of-frame Inter-chr q21.1 q43 125181 ChimerSeq ChiTaRs ChiTaRs RTEL1-RPLP0 RTEL1 chr20 62305447 RPLP0 chr12 120634505 Exonic hg19 NA BC000673 Out-of-frame Inter-chr q13.33 q24.23 125182 ChimerSeq ChiTaRs ChiTaRs MALAT1-NCOR2 MALAT1 chr11 65268091 NCOR2 chr12 124887007 Exonic hg19 NA BF846253 Out-of-frame Inter-chr q13.1 q24.31 125183 ChimerSeq ChiTaRs ChiTaRs EIF5-BOP1 EIF5 chr14 103804311 BOP1 chr8 145505145 Exonic hg19 NA DB066453 Out-of-frame Inter-chr q32.32 q24.3 125184 ChimerSeq ChiTaRs ChiTaRs PCDH17-PCDH17 PCDH17 chr13 58299753 PCDH17 chr13 58240600 Exonic hg19 NA BX280393 Out-of-frame Intra-chr q21.1 Tumor suppressor gene q21.1 Tumor suppressor gene 125185 ChimerSeq ChiTaRs ChiTaRs UFD1L-DONSON UFD1L chr22 19442349 DONSON chr21 35279652 Exonic hg19 NA BF840003 Out-of-frame Inter-chr q22.11 125186 ChimerSeq ChiTaRs ChiTaRs C3AR1-C3AR1 C3AR1 chr12 8211983 C3AR1 chr12 8212671 Exonic hg19 NA CB053853 Out-of-frame Intra-chr p13.31 p13.31 125187 ChimerSeq ChiTaRs ChiTaRs BAZ2A-TBC1D12 BAZ2A chr12 57008764 TBC1D12 chr10 96269370 Exonic hg19 NA BF376013 Out-of-frame Inter-chr q13.3 Transcription factor q23.33 125188 ChimerSeq ChiTaRs ChiTaRs DDX19B-APOB DDX19B chr16 70406156 APOB chr2 21226053 Exonic hg19 NA BP238983 Out-of-frame Inter-chr q22.1 p24.1 125189 ChimerSeq ChiTaRs ChiTaRs ACIN1-ACIN1 ACIN1 chr14 23528426 ACIN1 chr14 23535467 Exonic hg19 NA BF081323 Out-of-frame Intra-chr q11.2 q11.2 125190 ChimerSeq ChiTaRs ChiTaRs PDIA3-ADAM12 PDIA3 chr15 44046043 ADAM12 chr10 128043505 Exonic hg19 NA BQ369543 Out-of-frame Inter-chr q15.3 q26.2 125191 ChimerSeq ChiTaRs ChiTaRs KRI1-KRI1 KRI1 chr19 10673489 KRI1 chr19 10671698 Exonic hg19 NA BF336733 Out-of-frame Intra-chr p13.2 p13.2 125192 ChimerSeq ChiTaRs ChiTaRs HSPA8-SLC7A6 HSPA8 chr11 122929465 SLC7A6 chr16 68334246 Exonic hg19 NA BQ338693 Out-of-frame Inter-chr q24.1 q22.1 125193 ChimerSeq ChiTaRs ChiTaRs ZNF132-ZNF584 ZNF132 chr19 58946693 ZNF584 chr19 58928210 Exonic hg19 NA DA496983 Out-of-frame Intra-chr q13.43 Transcription factor q13.43 Transcription factor 125194 ChimerSeq ChiTaRs ChiTaRs RMI2-CACNA1C RMI2 chr16 11370337 CACNA1C chr12 2394520 Exonic hg19 NA DB055213 Out-of-frame Inter-chr p13.13 p13.33 125195 ChimerSeq ChiTaRs ChiTaRs DNAH3-DNAH3 DNAH3 chr16 20981278 DNAH3 chr16 20976481 Exonic hg19 NA AL039583 Out-of-frame Intra-chr p12.3 p12.3 125196 ChimerSeq ChiTaRs ChiTaRs ZNF384-EIF4B ZNF384 chr12 6776442 EIF4B chr12 53433141 Exonic hg19 NA AW386153 Out-of-frame Intra-chr p13.31 Oncogene Transcription factor q13.13 125197 ChimerSeq ChiTaRs ChiTaRs CCDC117-CCDC117 CCDC117 chr22 29184676 CCDC117 chr22 29185056 Exonic hg19 NA AW238233 Out-of-frame Intra-chr q12.1 q12.1 125198 ChimerSeq ChiTaRs ChiTaRs PROSER1-TCOF1 PROSER1 chr13 39587108 TCOF1 chr5 149756048 Exonic hg19 NA BF799173 Out-of-frame Inter-chr q13.3 q32 125199 ChimerSeq ChiTaRs ChiTaRs PRKCA-ATP2A2 PRKCA chr17 64691219 ATP2A2 chr12 110759445 Exonic hg19 NA CV427033 Out-of-frame Inter-chr q24.2 q24.11 125200 ChimerSeq ChiTaRs ChiTaRs ATG4D-C4orf22 ATG4D chr19 10664013 C4orf22 chr4 81455000 Exonic hg19 NA BG393063 Out-of-frame Inter-chr p13.2 q21.21 125201 ChimerSeq ChiTaRs ChiTaRs MED4-STAT5A MED4 chr13 48650838 STAT5A chr17 40456578 Exonic hg19 NA AI927873 Out-of-frame Inter-chr q14.2 q21.2 Tumor suppressor gene Transcription factor 125202 ChimerSeq ChiTaRs ChiTaRs NRIP1-BTBD1 NRIP1 chr21 16437239 BTBD1 chr15 83710610 Exonic hg19 NA CN412233 Out-of-frame Inter-chr q21.1 q25.2 125203 ChimerSeq ChiTaRs ChiTaRs KDM4B-HP1BP3 KDM4B chr19 4978675 HP1BP3 chr1 21069602 Exonic hg19 NA BQ222643 Out-of-frame Inter-chr p13.3 p36.12 125204 ChimerSeq ChiTaRs ChiTaRs LGALS3BP-LGALS3BP LGALS3BP chr17 76967489 LGALS3BP chr17 76967492 Exonic hg19 NA AW275453 Out-of-frame Intra-chr q25.3 q25.3 125205 ChimerSeq ChiTaRs ChiTaRs NDUFB7-ALDH1B1 NDUFB7 chr19 14677064 ALDH1B1 chr9 38396308 Exonic hg19 NA AI422203 Out-of-frame Inter-chr p13.12 p13.1 125206 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65272726 MALAT1 chr11 65272767 Exonic hg19 NA BE840873 Out-of-frame Intra-chr q13.1 q13.1 125207 ChimerSeq ChiTaRs ChiTaRs DUSP16-DUSP16 DUSP16 chr12 12699106 DUSP16 chr12 12698623 Exonic hg19 NA BF910003 Out-of-frame Intra-chr 125208 ChimerSeq ChiTaRs ChiTaRs MMP2-MMP2 MMP2 chr16 55540149 MMP2 chr16 55519557 Exonic hg19 NA AU145173 Out-of-frame Intra-chr q12.2 Oncogene q12.2 Oncogene 125209 ChimerSeq ChiTaRs ChiTaRs CCPG1-SIRT3 CCPG1 chr15 55649316 SIRT3 chr11 216341 Exonic hg19 NA BM968323 Out-of-frame Inter-chr q21.3 p15.5 Tumor suppressor gene 125210 ChimerSeq ChiTaRs ChiTaRs KCNA1-NELL2 KCNA1 chr12 5019638 NELL2 chr12 44917149 Exonic hg19 NA DA091593 5'UTR-CDS Intra-chr p13.32 q12 125211 ChimerSeq ChiTaRs ChiTaRs ALDH2-ALDH2 ALDH2 chr12 112235978 ALDH2 chr12 112236012 Exonic hg19 NA AI907073 Out-of-frame Intra-chr q24.12 q24.12 125212 ChimerSeq ChiTaRs ChiTaRs PCCA-SERPINE1 PCCA chr13 101119477 SERPINE1 chr7 100778865 Exonic hg19 NA BG980943 Out-of-frame Inter-chr q32.3 q22.1 125213 ChimerSeq ChiTaRs ChiTaRs CACNA1H-PLXNC1 CACNA1H chr16 1250235 PLXNC1 chr12 94599453 Exonic hg19 NA BF749213 Out-of-frame Inter-chr p13.3 q22 Tumor suppressor gene 125214 ChimerSeq ChiTaRs ChiTaRs RAX-RAX RAX chr18 56940199 RAX chr18 56936478 Exonic hg19 NA BM719303 Out-of-frame Intra-chr q21.32 Transcription factor q21.32 Transcription factor 125215 ChimerSeq ChiTaRs ChiTaRs ZADH2-AP2B1 ZADH2 chr18 72912535 AP2B1 chr17 33980085 Exonic hg19 NA BI018333 Out-of-frame Inter-chr q22.3 q12 125216 ChimerSeq ChiTaRs ChiTaRs COX7A1-POSTN COX7A1 chr19 36643337 POSTN chr13 38151394 Exonic hg19 NA AJ707523 Out-of-frame Inter-chr q13.12 q13.3 125217 ChimerSeq ChiTaRs ChiTaRs IL17RA-IL17RA IL17RA chr22 17593667 IL17RA chr22 17593497 Exonic hg19 NA BU680693 Out-of-frame Intra-chr q11.1 q11.1 125218 ChimerSeq ChiTaRs ChiTaRs KIAA0430-ADA KIAA0430 chr16 15705064 ADA chr20 43266946 Exonic hg19 NA AW085123 Out-of-frame Inter-chr q13.12 125219 ChimerSeq ChiTaRs ChiTaRs ACTG1-ACTG1 ACTG1 chr17 79477358 ACTG1 chr17 79477360 Exonic hg19 NA BF082083 Out-of-frame Intra-chr q25.3 q25.3 125220 ChimerSeq ChiTaRs ChiTaRs MUS81-MUS81 MUS81 chr11 65633738 MUS81 chr11 65631070 Exonic hg19 NA BM795493 3'UTR-CDS Intra-chr q13.1 Tumor suppressor gene q13.1 Tumor suppressor gene 125221 ChimerSeq ChiTaRs ChiTaRs TMC5-TMC5 TMC5 chr16 19441964 TMC5 chr16 19498253 Exonic hg19 NA AI344053 Out-of-frame Intra-chr p12.3 p12.3 125222 ChimerSeq ChiTaRs ChiTaRs FKBP3-FKBP3 FKBP3 chr14 45601525 FKBP3 chr14 45601377 Exonic hg19 NA CV312623 Out-of-frame Intra-chr q21.2 q21.2 125223 ChimerSeq ChiTaRs ChiTaRs ACTN1-ACTN1 ACTN1 chr14 69341454 ACTN1 chr14 69341463 Exonic hg19 NA BU619843 Out-of-frame Intra-chr q24.1 q24.1 125224 ChimerSeq ChiTaRs ChiTaRs BCL11B-MICB BCL11B chr14 99655805 MICB chr6 2586310 Exonic hg19 NA EL582403 Out-of-frame Inter-chr q32.2 Oncogene Transcription factor 125225 ChimerSeq ChiTaRs ChiTaRs FKBP8-FKBP8 FKBP8 chr19 18652738 FKBP8 chr19 18642573 Exonic hg19 NA L37033 Out-of-frame Intra-chr p13.11 p13.11 125226 ChimerSeq ChiTaRs ChiTaRs RNF166-HRH1 RNF166 chr16 88763004 HRH1 chr3 11197740 Exonic hg19 NA BU754413 Out-of-frame Inter-chr q24.3 p25.3 125227 ChimerSeq ChiTaRs ChiTaRs ALKBH8-ALKBH8 ALKBH8 chr11 107436461 ALKBH8 chr11 107375340 Exonic hg19 NA AK095523 5'UTR-CDS Intra-chr q22.3 q22.3 125228 ChimerSeq ChiTaRs ChiTaRs NME1-THRA NME1 chr17 49233086 THRA chr17 38246322 Exonic hg19 NA BE765003 Out-of-frame Intra-chr q21.33 Tumor suppressor gene q21.1 Tumor suppressor gene Transcription factor 125229 ChimerSeq ChiTaRs ChiTaRs ZSWIM4-MSMO1 ZSWIM4 chr19 13942671 MSMO1 chr4 166249026 Exonic hg19 NA BG979123 Out-of-frame Inter-chr p13.13 q32.3 125230 ChimerSeq ChiTaRs ChiTaRs SLC25A1-SLC25A1 SLC25A1 chr22 19163722 SLC25A1 chr22 19164105 Exonic hg19 NA CA427923 Out-of-frame Intra-chr q11.21 q11.21 125231 ChimerSeq ChiTaRs ChiTaRs SERPINH1-AP2M1 SERPINH1 chr11 75283822 AP2M1 chr3 183898742 Exonic hg19 NA AA631243 Out-of-frame Inter-chr q13.5 q27.1 125232 ChimerSeq ChiTaRs ChiTaRs WDR62-CCND2 WDR62 chr19 36593629 CCND2 chr12 4411492 Exonic hg19 NA BF800113 Out-of-frame Inter-chr q13.12 p13.32 Oncogene 125233 ChimerSeq ChiTaRs ChiTaRs GPRC5A-CSRNP3 GPRC5A chr12 13045754 CSRNP3 chr2 166490580 Exonic hg19 NA CV350233 Out-of-frame Inter-chr p13.1 Tumor suppressor gene q24.3 Transcription factor 125234 ChimerSeq ChiTaRs ChiTaRs LMAN1-KLF6 LMAN1 chr18 57013282 KLF6 chr10 3819868 Exonic hg19 NA BU625653 Out-of-frame Inter-chr q21.32 p15.2 Oncogene Tumor suppressor gene Transcription factor 125235 ChimerSeq ChiTaRs ChiTaRs HS3ST3A1-GSTO1 HS3ST3A1 chr17 13505235 GSTO1 chr10 106014662 Exonic hg19 NA BC082963 Out-of-frame Inter-chr p12 q25.1 125236 ChimerSeq ChiTaRs ChiTaRs NEDD4-NEDD4 NEDD4 chr15 56126321 NEDD4 chr15 56126449 Exonic hg19 NA BF815723 Out-of-frame Intra-chr q21.3 Tumor suppressor gene q21.3 Tumor suppressor gene 125237 ChimerSeq ChiTaRs ChiTaRs PCIF1-AMPD2 PCIF1 chr20 44566328 AMPD2 chr1 110174531 Exonic hg19 NA BI021213 Out-of-frame Inter-chr q13.12 p13.3 125238 ChimerSeq ChiTaRs ChiTaRs YWHAH-YWHAH YWHAH chr22 32352965 YWHAH chr22 32352733 Exonic hg19 NA CN353393 Out-of-frame Intra-chr q12.3 q12.3 125239 ChimerSeq ChiTaRs ChiTaRs SEL1L-SEL1L SEL1L chr14 81942180 SEL1L chr14 81942212 Exonic hg19 NA CA313743 Out-of-frame Intra-chr q31.1 q31.1 125240 ChimerSeq ChiTaRs ChiTaRs INPPL1-COIL INPPL1 chr11 71940796 COIL chr17 55016435 Exonic hg19 NA BF990573 In-Frame Inter-chr q13.4 q22 125241 ChimerSeq ChiTaRs ChiTaRs DYNC1H1-FAM193B DYNC1H1 chr14 102514253 FAM193B chr5 176947602 Exonic hg19 NA BM718563 Out-of-frame Inter-chr q32.31 q35.3 125242 ChimerSeq ChiTaRs ChiTaRs SMAD2-PPP6R3 SMAD2 chr18 45431045 PPP6R3 chr11 68274131 Exonic hg19 NA CV405453 Out-of-frame Inter-chr q21.1 Oncogene Tumor suppressor gene q13.2 125243 ChimerSeq ChiTaRs ChiTaRs SMARCB1-SMARCB1 SMARCB1 chr22 24134011 SMARCB1 chr22 24159083 Exonic hg19 NA BF088153 Out-of-frame Intra-chr q11.23 Oncogene Tumor suppressor gene q11.23 Oncogene Tumor suppressor gene 125244 ChimerSeq ChiTaRs ChiTaRs ECH1-ECH1 ECH1 chr19 39306170 ECH1 chr19 39306496 Exonic hg19 NA BF911173 3'UTR-CDS Intra-chr 125245 ChimerSeq ChiTaRs ChiTaRs TBC1D15-TBC1D15 TBC1D15 chr12 72316910 TBC1D15 chr12 72316926 Exonic hg19 NA BM469813 Out-of-frame Intra-chr q21.1 q21.1 125246 ChimerSeq ChiTaRs ChiTaRs KRT8-PALM3 KRT8 chr12 53346685 PALM3 chr19 14164179 Exonic hg19 NA BC007663 Out-of-frame Inter-chr q13.13 p13.12 125247 ChimerSeq ChiTaRs ChiTaRs INSR-INSR INSR chr19 7149388 INSR chr19 7252514 Exonic hg19 NA CV356203 Out-of-frame Intra-chr p13.2 TK:InsR p13.2 TK:InsR 125248 ChimerSeq ChiTaRs ChiTaRs CTC1-COL14A1 CTC1 chr17 8147839 COL14A1 chr8 121261462 Exonic hg19 NA AW813893 Out-of-frame Inter-chr p13.1 q24.12 125249 ChimerSeq ChiTaRs ChiTaRs PFKM-PFKM PFKM chr12 48535457 PFKM chr12 48535108 Exonic hg19 NA BX537703 Out-of-frame Intra-chr q13.11 q13.11 125250 ChimerSeq ChiTaRs ChiTaRs CACNA1C-CACNA1C CACNA1C chr12 2529428 CACNA1C chr12 2553124 Exonic hg19 NA BF869543 Out-of-frame Intra-chr p13.33 p13.33 125251 ChimerSeq ChiTaRs ChiTaRs COMT-THBS3 COMT chr22 19957503 THBS3 chr1 155177604 Exonic hg19 NA AW340773 Out-of-frame Inter-chr q11.21 q22 125252 ChimerSeq ChiTaRs ChiTaRs BBC3-BBC3 BBC3 chr19 47725582 BBC3 chr19 47733251 Exonic hg19 NA BE003123 Out-of-frame Intra-chr q13.32 Tumor suppressor gene q13.32 Tumor suppressor gene 125253 ChimerSeq ChiTaRs ChiTaRs ST8SIA3-ST8SIA3 ST8SIA3 chr18 55030607 ST8SIA3 chr18 55028520 Exonic hg19 NA CA773823 Out-of-frame Intra-chr q21.31 q21.31 125254 ChimerSeq ChiTaRs ChiTaRs PIK3IP1-PIK3IP1 PIK3IP1 chr22 31678749 PIK3IP1 chr22 31678985 Exonic hg19 NA BE178423 Out-of-frame Intra-chr q12.2 q12.2 125255 ChimerSeq ChiTaRs ChiTaRs CUL4A-CUL4A CUL4A chr13 113909345 CUL4A chr13 113909351 Exonic hg19 NA BF327003 Out-of-frame Intra-chr q34 q34 125256 ChimerSeq ChiTaRs ChiTaRs ZNF566-NFIA ZNF566 chr19 36980796 NFIA chr1 61743191 Exonic hg19 NA DA063553 5'UTR-CDS Inter-chr q13.12 Transcription factor p31.3 Transcription factor 125257 ChimerSeq ChiTaRs ChiTaRs TMBIM6-COX16 TMBIM6 chr12 50146329 COX16 chr14 70793096 Exonic hg19 NA DB253863 Out-of-frame Inter-chr q13.12 q24.2 125258 ChimerSeq ChiTaRs ChiTaRs NPTX1-NPTX1 NPTX1 chr17 78442410 NPTX1 chr17 78443253 Exonic hg19 NA DB469323 Out-of-frame Intra-chr q25.3 q25.3 125259 ChimerSeq ChiTaRs ChiTaRs LTA4H-ADCY2 LTA4H chr12 96407038 ADCY2 chr1 152004982 Exonic hg19 NA BE875453 Out-of-frame Inter-chr q23.1 p15.31 125260 ChimerSeq ChiTaRs ChiTaRs TIMP2-SRGAP2B TIMP2 chr17 76849204 SRGAP2B chr1 143916080 Exonic hg19 NA AI797303 Out-of-frame Inter-chr q25.3 q21.1 125261 ChimerSeq ChiTaRs ChiTaRs RBFOX2-AHCYL1 RBFOX2 chr22 36234400 AHCYL1 chr1 110561072 Exonic hg19 NA AA830163 Out-of-frame Inter-chr p13.3 Tumor suppressor gene 125262 ChimerSeq ChiTaRs ChiTaRs SCAF11-MALAT1 SCAF11 chr12 46332594 MALAT1 chr11 65272249 Exonic hg19 NA BI060233 Out-of-frame Inter-chr q12 q13.1 125263 ChimerSeq ChiTaRs ChiTaRs CD3EAP-CD3EAP CD3EAP chr19 45912312 CD3EAP chr19 45912320 Exonic hg19 NA BQ423643 Out-of-frame Intra-chr q13.32 q13.32 125264 ChimerSeq ChiTaRs ChiTaRs CHST11-ARHGEF1 CHST11 chr12 105120888 ARHGEF1 chr19 42402495 Exonic hg19 NA CB270023 Out-of-frame Inter-chr q23.3 q13.2 125265 ChimerSeq ChiTaRs ChiTaRs MAX-FGR MAX chr14 65546207 FGR chr1 27939823 Exonic hg19 NA BI031363 Out-of-frame Inter-chr q23.3 Oncogene Tumor suppressor gene Transcription factor p35.3 TK:Src 125266 ChimerSeq ChiTaRs ChiTaRs CCDC97-PRKCE CCDC97 chr19 41818681 PRKCE chr2 46312655 Exonic hg19 NA DQ464350 Out-of-frame Inter-chr q13.2 p21 Tumor suppressor gene 125267 ChimerSeq ChiTaRs ChiTaRs FURIN-FURIN FURIN chr15 91423136 FURIN chr15 91423454 Exonic hg19 NA BF959423 Out-of-frame Intra-chr q26.1 q26.1 125268 ChimerSeq ChiTaRs ChiTaRs NARS2-HMGB2 NARS2 chr11 78177008 HMGB2 chr4 174254250 Exonic hg19 NA BQ371623 Out-of-frame Inter-chr q14.1 q34.1 125269 ChimerSeq ChiTaRs ChiTaRs NARS2-VTI1A NARS2 chr11 78209149 VTI1A chr10 114307687 Exonic hg19 NA BG924743 Out-of-frame Inter-chr q14.1 q25.2 125270 ChimerSeq ChiTaRs ChiTaRs MYBBP1A-BAG6 MYBBP1A chr17 4453492 BAG6 chr6 3123789 Exonic hg19 NA BF923713 Out-of-frame Inter-chr p13.2 Tumor suppressor gene p21.33 125271 ChimerSeq ChiTaRs ChiTaRs ADAMTS1-ADAMTS1 ADAMTS1 chr21 28209623 ADAMTS1 chr21 28212838 Exonic hg19 NA N27243 Out-of-frame Intra-chr q21.3 q21.3 125272 ChimerSeq ChiTaRs ChiTaRs CIRBP-AS1-OBSCN CIRBP-AS1 chr19 1271418 OBSCN chr1 228493832 Exonic hg19 NA BP228603 Out-of-frame Inter-chr p13.3 q42.13 Tumor suppressor gene 125273 ChimerSeq ChiTaRs ChiTaRs BSG-ZKSCAN1 BSG chr19 580692 ZKSCAN1 chr7 99613281 Exonic hg19 NA BF819563 Out-of-frame Inter-chr p13.3 q22.1 Transcription factor 125274 ChimerSeq ChiTaRs ChiTaRs TSPAN11-TRIM29 TSPAN11 chr12 31126522 TRIM29 chr11 119988930 Exonic hg19 NA BG992093 Out-of-frame Inter-chr p11.21 q23.3 125275 ChimerSeq ChiTaRs ChiTaRs ZNF587-PHACTR2 ZNF587 chr19 58341528 PHACTR2 chr6 144104356 Exonic hg19 NA BF990913 Out-of-frame Inter-chr q13.43 Transcription factor q24.2 125276 ChimerSeq ChiTaRs ChiTaRs PRKCA-GALNT13 PRKCA chr17 64511798 GALNT13 chr2 154989282 Exonic hg19 NA BF665493 Out-of-frame Inter-chr q24.2 q23.3 125277 ChimerSeq ChiTaRs ChiTaRs IGDCC4-ARHGEF40 IGDCC4 chr15 65675866 ARHGEF40 chr14 21541231 Exonic hg19 NA CN359993 Out-of-frame Inter-chr q22.31 q11.2 125278 ChimerSeq ChiTaRs ChiTaRs RAP1B-TUBGCP3 RAP1B chr12 69032201 TUBGCP3 chr13 113193332 Exonic hg19 NA BF327763 Out-of-frame Inter-chr q15 125279 ChimerSeq ChiTaRs ChiTaRs DICER1-CCDC14 DICER1 chr14 95569908 CCDC14 chr3 123634212 Exonic hg19 NA BE836683 Out-of-frame Inter-chr q32.13 Oncogene Tumor suppressor gene q21.1 125280 ChimerSeq ChiTaRs ChiTaRs PRB2-C1S PRB2 chr12 11548499 C1S chr12 7169162 Exonic hg19 NA CR749503 Out-of-frame Intra-chr p13.2 p13.31 125281 ChimerSeq ChiTaRs ChiTaRs DDN-MLST8 DDN chr12 49390794 MLST8 chr16 2258559 Exonic hg19 NA BF964073 Out-of-frame Inter-chr q13.12 p13.3 125282 ChimerSeq ChiTaRs ChiTaRs USP30-USP30 USP30 chr12 109519198 USP30 chr12 109505328 Exonic hg19 NA BG012483 Out-of-frame Intra-chr q24.11 q24.11 125283 ChimerSeq ChiTaRs ChiTaRs CD276-INS-IGF2 CD276 chr15 74006855 INS-IGF2 chr11 2182091 Exonic hg19 NA BQ549143 Out-of-frame Inter-chr q24.1 p15.5 125284 ChimerSeq ChiTaRs ChiTaRs ADIPOR2-ANKRD42 ADIPOR2 chr12 1847883 ANKRD42 chr11 82965716 Exonic hg19 NA BM461953 Out-of-frame Inter-chr p13.33 q14.1 125285 ChimerSeq ChiTaRs ChiTaRs TYRO3-TJP1 TYRO3 chr15 41866613 TJP1 chr15 30092834 Exonic hg19 NA BE843213 Out-of-frame Intra-chr q15.1 TK:Axl 125286 ChimerSeq ChiTaRs ChiTaRs CSNK1G2-NBPF11 CSNK1G2 chr19 1969813 NBPF11 chr1 147778120 Exonic hg19 NA BQ331903 Out-of-frame Inter-chr p13.3 q21.2 125287 ChimerSeq ChiTaRs ChiTaRs PRKCH-SET PRKCH chr14 61831219 SET chr9 131456008 Exonic hg19 NA BQ378983 Out-of-frame Inter-chr q23.1 q34.11 125288 ChimerSeq ChiTaRs ChiTaRs ADARB1-NFKBIZ ADARB1 chr21 46548887 NFKBIZ chr3 101579269 Exonic hg19 NA AW630143 Out-of-frame Inter-chr q22.3 Tumor suppressor gene q12.3 125289 ChimerSeq ChiTaRs ChiTaRs MALAT1-KIAA1199 MALAT1 chr11 65268336 KIAA1199 chr15 81223627 Exonic hg19 NA BG927703 Out-of-frame Inter-chr q13.1 125290 ChimerSeq ChiTaRs ChiTaRs LASP1-MTMR1 LASP1 chr17 37078021 MTMR1 chrX 149931373 Exonic hg19 NA DB343893 Out-of-frame Inter-chr q12 q28 125291 ChimerSeq ChiTaRs ChiTaRs ANKRD52-SST ANKRD52 chr12 56648006 SST chr3 187386705 Exonic hg19 NA AK126893 Out-of-frame Inter-chr q13.3 q27.3 125292 ChimerSeq ChiTaRs ChiTaRs EEF2-EEF2 EEF2 chr19 3976742 EEF2 chr19 3980552 Exonic hg19 NA BF761203 Out-of-frame Intra-chr p13.3 p13.3 125293 ChimerSeq ChiTaRs ChiTaRs CTSZ-CTSZ CTSZ chr20 57570448 CTSZ chr20 57570454 Exonic hg19 NA BF902823 Out-of-frame Intra-chr q13.32 q13.32 125294 ChimerSeq ChiTaRs ChiTaRs ACACB-ACACB ACACB chr12 109626653 ACACB chr12 109626532 Exonic hg19 NA BF822123 Out-of-frame Intra-chr q24.11 q24.11 125295 ChimerSeq ChiTaRs ChiTaRs SEC23A-SEC23A SEC23A chr14 39509996 SEC23A chr14 39501988 Exonic hg19 NA D82153 Out-of-frame Intra-chr q21.1 q21.1 125296 ChimerSeq ChiTaRs ChiTaRs ZNFX1-CCDC181 ZNFX1 chr20 47872464 CCDC181 chr1 169394069 Exonic hg19 NA BE837753 Out-of-frame Inter-chr q13.13 q24.2 125297 ChimerSeq ChiTaRs ChiTaRs PDXDC1-AHCYL1 PDXDC1 chr16 15130799 AHCYL1 chr1 110561585 Exonic hg19 NA DA382933 Out-of-frame Inter-chr p13.11 p13.3 Tumor suppressor gene 125298 ChimerSeq ChiTaRs ChiTaRs KHSRP-BHLHE41 KHSRP chr19 6424776 BHLHE41 chr12 26275216 Exonic hg19 NA M64437 Out-of-frame Inter-chr p13.3 p12.1 Tumor suppressor gene Transcription factor 125299 ChimerSeq ChiTaRs ChiTaRs ZNF708-PTPRZ1 ZNF708 chr19 21506506 PTPRZ1 chr7 121652002 Exonic hg19 NA BE765133 Out-of-frame Inter-chr p12 Transcription factor q31.32 125300 ChimerSeq ChiTaRs ChiTaRs IRF8-MRPL14 IRF8 chr16 85940745 MRPL14 chr6 44086640 Exonic hg19 NA CA392423 Out-of-frame Inter-chr q24.1 Tumor suppressor gene Transcription factor p21.1 125301 ChimerSeq ChiTaRs ChiTaRs CXCR5-CXorf36 CXCR5 chr11 118760589 CXorf36 chrX 45008192 Exonic hg19 NA BG984783 Out-of-frame Inter-chr q23.3 p11.3 125302 ChimerSeq ChiTaRs ChiTaRs SRSF6-HMBOX1 SRSF6 chr20 42092245 HMBOX1 chr8 28906473 Exonic hg19 NA AI122983 Out-of-frame Inter-chr q13.11 p21.1 Transcription factor 125303 ChimerSeq ChiTaRs ChiTaRs CGNL1-HTN3 CGNL1 chr15 57816385 HTN3 chr4 70894176 Exonic hg19 NA AK130503 Out-of-frame Inter-chr q21.3 125304 ChimerSeq ChiTaRs ChiTaRs ATP5B-ATP5B ATP5B chr12 57033812 ATP5B chr12 57031962 Exonic hg19 NA BG179093 Out-of-frame Intra-chr q13.3 q13.3 125305 ChimerSeq ChiTaRs ChiTaRs UQCRFS1-ANXA3 UQCRFS1 chr19 29703613 ANXA3 chr4 79502888 Exonic hg19 NA BI032173 Out-of-frame Inter-chr q12 q21.21 125306 ChimerSeq ChiTaRs ChiTaRs TNFRSF1A-TNFRSF1A TNFRSF1A chr12 6451224 TNFRSF1A chr12 6437940 Exonic hg19 NA X55313 Out-of-frame Intra-chr p13.31 p13.31 125307 ChimerSeq ChiTaRs ChiTaRs GPI-MYH11 GPI chr19 34877899 MYH11 chr16 15897730 Exonic hg19 NA BF358813 Out-of-frame Inter-chr Oncogene 125308 ChimerSeq ChiTaRs ChiTaRs SAMD4A-SAMD4A SAMD4A chr14 55258851 SAMD4A chr14 55258824 Exonic hg19 NA BF344193 Out-of-frame Intra-chr q22.2 q22.2 125309 ChimerSeq ChiTaRs ChiTaRs MALAT1-MALAT1 MALAT1 chr11 65267661 MALAT1 chr11 65267132 Exonic hg19 NA BQ632833 Out-of-frame Intra-chr q13.1 q13.1 125310 ChimerSeq ChiTaRs ChiTaRs PRPF8-FAM174B PRPF8 chr17 1561645 FAM174B chr15 93273318 Exonic hg19 NA AW877213 Out-of-frame Inter-chr q26.1 125311 ChimerSeq ChiTaRs ChiTaRs RUNX1-GRM7 RUNX1 chr21 36206777 GRM7 chr3 7723965 Exonic hg19 NA AY509915 Out-of-frame Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor p26.1 125312 ChimerSeq ChiTaRs ChiTaRs PREX1-SUGT1 PREX1 chr20 47353392 SUGT1 chr13 53254108 Exonic hg19 NA BE774943 Out-of-frame Inter-chr q13.13 q14.3 125313 ChimerSeq ChiTaRs ChiTaRs ALG5-PRKCA ALG5 chr13 37539828 PRKCA chr17 64524798 Exonic hg19 NA BF815383 Out-of-frame Inter-chr q13.3 q24.2 125314 ChimerSeq ChiTaRs ChiTaRs CTTN-CTTN CTTN chr11 70266314 CTTN chr11 70266611 Exonic hg19 NA BF922863 Out-of-frame Intra-chr q13.3 q13.3 125315 ChimerSeq ChiTaRs ChiTaRs EDC4-BRCA1 EDC4 chr16 67918398 BRCA1 chr17 41284090 Exonic hg19 NA AW594233 Out-of-frame Inter-chr q22.1 q21.31 Oncogene Tumor suppressor gene 125316 ChimerSeq ChiTaRs ChiTaRs LMO7-MUC4 LMO7 chr13 76432151 MUC4 chr3 195530516 Exonic hg19 NA AW391853 Out-of-frame Inter-chr q22.2 125317 ChimerSeq ChiTaRs ChiTaRs ACTN4-SERPING1 ACTN4 chr19 39139779 SERPING1 chr11 57367417 Exonic hg19 NA H57753 Out-of-frame Inter-chr q12.1 125318 ChimerSeq ChiTaRs ChiTaRs AARSD1-DIABLO AARSD1 chr17 41113274 DIABLO chr12 122692567 Exonic hg19 NA BF363833 Out-of-frame Inter-chr q21.31 q24.31 Tumor suppressor gene 125319 ChimerSeq ChiTaRs ChiTaRs SAP30BP-TM7SF3 SAP30BP chr17 73696321 TM7SF3 chr12 27158650 Exonic hg19 NA BF908033 Out-of-frame Inter-chr q25.1 p11.23 125320 ChimerSeq ChiTaRs ChiTaRs MIB1-MIB1 MIB1 chr18 19422299 MIB1 chr18 19421828 Exonic hg19 NA DW412193 Out-of-frame Intra-chr q11.2 q11.2 125321 ChimerSeq ChiTaRs ChiTaRs NDRG2-TRAF4 NDRG2 chr14 21491019 TRAF4 chr17 27074884 Exonic hg19 NA BI052853 Out-of-frame Inter-chr q11.2 Tumor suppressor gene q11.2 125322 ChimerSeq ChiTaRs ChiTaRs RPS16-NOL7 RPS16 chr19 39926573 NOL7 chr6 13615623 Exonic hg19 NA BE906373 Out-of-frame Inter-chr q13.2 p23 Tumor suppressor gene 125323 ChimerSeq ChiTaRs ChiTaRs TM9SF4-CALD1 TM9SF4 chr20 30755024 CALD1 chr7 134642836 Exonic hg19 NA AW993553 Out-of-frame Inter-chr q11.21 q33 125324 ChimerSeq ChiTaRs ChiTaRs TFIP11-NDUFS3 TFIP11 chr22 26890141 NDUFS3 chr11 47600626 Exonic hg19 NA Z24803 Out-of-frame Inter-chr q12.1 p11.2 125325 ChimerSeq ChiTaRs ChiTaRs CNDP2-RPL9 CNDP2 chr18 72167268 RPL9 chr4 39455744 Exonic hg19 NA BF814523 CDS-3'UTR Inter-chr q22.3 Tumor suppressor gene p14 125326 ChimerSeq ChiTaRs ChiTaRs RTF1-RTF1 RTF1 chr15 41767962 RTF1 chr15 41730564 Exonic hg19 NA BQ019593 Out-of-frame Intra-chr q15.1 q15.1 125327 ChimerSeq ChiTaRs ChiTaRs GDF11-GDF11 GDF11 chr12 56144011 GDF11 chr12 56144764 Exonic hg19 NA AW889083 Out-of-frame Intra-chr q13.2 q13.2 125328 ChimerSeq ChiTaRs ChiTaRs APLP2-APLP2 APLP2 chr11 130013790 APLP2 chr11 130013759 Exonic hg19 NA BU676663 Out-of-frame Intra-chr q24.3 q24.3 125329 ChimerSeq ChiTaRs ChiTaRs ZZEF1-ZZEF1 ZZEF1 chr17 3974402 ZZEF1 chr17 3974733 Exonic hg19 NA W27943 Out-of-frame Intra-chr p13.2 p13.2 125330 ChimerSeq ChiTaRs ChiTaRs MSANTD4-VPS37A MSANTD4 chr11 105879196 VPS37A chr8 17154602 Exonic hg19 NA Z41533 Out-of-frame Inter-chr q22.3 Transcription factor p22 125331 ChimerSeq ChiTaRs ChiTaRs DAZAP2-DAZAP2 DAZAP2 chr12 51635342 DAZAP2 chr12 51634924 Exonic hg19 NA BF903343 Out-of-frame Intra-chr q13.13 q13.13 125332 ChimerSeq ChiTaRs ChiTaRs L3MBTL1-L3MBTL1 L3MBTL1 chr20 42146788 L3MBTL1 chr20 42146445 Exonic hg19 NA BX489833 Out-of-frame Intra-chr q13.12 Transcription factor q13.12 Transcription factor 125333 ChimerSeq ChiTaRs ChiTaRs CCT2-PAN3 CCT2 chr12 69995350 PAN3 chr13 28793464 Exonic hg19 NA AW518263 Out-of-frame Inter-chr q15 q12.2 125334 ChimerSeq ChiTaRs ChiTaRs CXADR-CXADR CXADR chr21 18888639 CXADR chr21 18888635 Exonic hg19 NA CB162053 Out-of-frame Intra-chr q21.1 q21.1 125335 ChimerSeq ChiTaRs ChiTaRs RAB37-STAT3 RAB37 chr17 72742799 STAT3 chr17 40467141 Exonic hg19 NA BE220933 Out-of-frame Intra-chr q25.1 q21.2 Oncogene Tumor suppressor gene Transcription factor 125336 ChimerSeq ChiTaRs ChiTaRs LITAF-HLA-DRA LITAF chr16 11642607 HLA-DRA chr6 32410961 Exonic hg19 NA CD366083 Out-of-frame Inter-chr p13.13 Tumor suppressor gene 125337 ChimerSeq ChiTaRs ChiTaRs ALDH3A1-ASPH ALDH3A1 chr17 19641367 ASPH chr8 62574243 Exonic hg19 NA BU685263 Out-of-frame Inter-chr p11.2 q12.3 125338 ChimerSeq ChiTaRs ChiTaRs EPS8-RHEB EPS8 chr12 15784480 RHEB chr7 151163751 Exonic hg19 NA BF930593 Out-of-frame Inter-chr p12.3 q36.1 Oncogene 125339 ChimerSeq ChiTaRs ChiTaRs LRRC57-LRRC57 LRRC57 chr15 42836522 LRRC57 chr15 42835670 Exonic hg19 NA BQ015293 Out-of-frame Intra-chr q15.2 q15.2 125340 ChimerSeq ChiTaRs ChiTaRs ACTN4-DSG2 ACTN4 chr19 39185620 DSG2 chr18 29127237 Exonic hg19 NA BF754373 Out-of-frame Inter-chr q12.1 125341 ChimerSeq ChiTaRs ChiTaRs PPP1R15A-EGLN1 PPP1R15A chr19 49377186 EGLN1 chr1 231500202 Exonic hg19 NA BE694093 Out-of-frame Inter-chr q13.33 q42.2 Tumor suppressor gene 125342 ChimerSeq ChiTaRs ChiTaRs OPA3-OPA3 OPA3 chr19 46056864 OPA3 chr19 46054019 Exonic hg19 NA BG994363 Out-of-frame Intra-chr q13.32 q13.32 125343 ChimerSeq ChiTaRs ChiTaRs FKBP11-UBE2V1 FKBP11 chr12 49316542 UBE2V1 chr20 48725128 Exonic hg19 NA BF089583 Out-of-frame Inter-chr q13.12 q13.13 125344 ChimerSeq ChiTaRs ChiTaRs CGNL1-TBC1D22A CGNL1 chr15 57840955 TBC1D22A chr22 47171682 Exonic hg19 NA BQ332213 Out-of-frame Inter-chr q21.3 q13.31 125345 ChimerSeq ChiTaRs ChiTaRs GNA13-PHF21A GNA13 chr17 63039408 PHF21A chr11 46105631 Exonic hg19 NA AI580083 Out-of-frame Inter-chr q24.1 p11.2 Transcription factor 125346 ChimerSeq ChiTaRs ChiTaRs ADIPOR2-BOLA2 ADIPOR2 chr12 1890543 BOLA2 chr16 29822049 Exonic hg19 NA BE706373 Out-of-frame Inter-chr p13.33 p11.2 125347 ChimerSeq ChiTaRs ChiTaRs CYB5D2-CYB5D2 CYB5D2 chr17 4060991 CYB5D2 chr17 4060750 Exonic hg19 NA CA944673 3'UTR-3'UTR Intra-chr p13.2 p13.2 125348 ChimerSeq ChiTaRs ChiTaRs ATP6V0A1-OSBPL3 ATP6V0A1 chr17 40652824 OSBPL3 chr7 24930184 Exonic hg19 NA BQ325193 Out-of-frame Inter-chr q21.2 p15.3 125349 ChimerSeq ChiTaRs ChiTaRs CDH1-SIK1 CDH1 chr16 68863700 SIK1 chr21 44840935 Exonic hg19 NA BG945743 In-Frame Inter-chr q22.1 Oncogene Tumor suppressor gene q22.3 Tumor suppressor gene 125350 ChimerSeq ChiTaRs ChiTaRs NR4A1-NR4A1 NR4A1 chr12 52450664 NR4A1 chr12 52450284 Exonic hg19 NA AV705223 Out-of-frame Intra-chr q13.13 Tumor suppressor gene Transcription factor q13.13 Tumor suppressor gene Transcription factor 125351 ChimerSeq ChiTaRs ChiTaRs CLIP1-APEX1 CLIP1 chr12 122763444 APEX1 chr14 20923840 Exonic hg19 NA AW867143 Out-of-frame Inter-chr q24.31 q11.2 Oncogene 125352 ChimerSeq ChiTaRs ChiTaRs HSPA13-CCDC88C HSPA13 chr21 15744885 CCDC88C chr14 91737669 Exonic hg19 NA AK022593 Out-of-frame Inter-chr q11.2 q32.12 125353 ChimerSeq ChiTaRs ChiTaRs CHD4-ISM1 CHD4 chr12 6710412 ISM1 chr20 13273023 Exonic hg19 NA AK074473 Out-of-frame Inter-chr p13.31 p12.1 125354 ChimerSeq ChiTaRs ChiTaRs NQO1-NQO1 NQO1 chr16 69744378 NQO1 chr16 69743558 Exonic hg19 NA BU189113 Out-of-frame Intra-chr q22.1 q22.1 125355 ChimerSeq ChiTaRs ChiTaRs RNF114-EZR RNF114 chr20 48569009 EZR chr6 159192304 Exonic hg19 NA BF748483 Out-of-frame Inter-chr q13.13 q25.3 125356 ChimerSeq ChiTaRs ChiTaRs JUND-CNOT8 JUND chr19 18391128 CNOT8 chr5 154238357 Exonic hg19 NA BF063953 Out-of-frame Inter-chr p13.11 Transcription factor q33.2 125357 ChimerSeq ChiTaRs ChiTaRs PPY-HBA2 PPY chr17 42018927 HBA2 chr16 223496 Exonic hg19 NA BP386553 Out-of-frame Inter-chr q21.31 p13.3 125358 ChimerSeq ChiTaRs ChiTaRs TENC1-TPT1 TENC1 chr12 53457712 TPT1 chr13 45914252 Exonic hg19 NA BM509633 Out-of-frame Inter-chr q14.13 125359 ChimerSeq ChiTaRs ChiTaRs TAX1BP3-UBE2G2 TAX1BP3 chr17 3571854 UBE2G2 chr21 46188962 Exonic hg19 NA BC035653 Out-of-frame Inter-chr p13.2 q22.3 125360 ChimerSeq ChiTaRs ChiTaRs ATG16L2-MAGI3 ATG16L2 chr11 72540629 MAGI3 chr1 114159170 Exonic hg19 NA BG981723 Out-of-frame Inter-chr q13.4 p13.2 125361 ChimerSeq ChiTaRs ChiTaRs ALDH1L2-DPPA4 ALDH1L2 chr12 105415637 DPPA4 chr3 109047067 Exonic hg19 NA BG150443 Out-of-frame Inter-chr q23.3 q13.13 125362 ChimerSeq ChiTaRs ChiTaRs TRIM16-TRIM16 TRIM16 chr17 15556116 TRIM16 chr17 15556094 Exonic hg19 NA BF798533 Out-of-frame Intra-chr p12 p12 125363 ChimerSeq ChiTaRs ChiTaRs ACTN4-MALAT1 ACTN4 chr19 39172434 MALAT1 chr11 65271270 Exonic hg19 NA BF767733 Out-of-frame Inter-chr q13.1 125364 ChimerSeq ChiTaRs ChiTaRs ULK1-ULK1 ULK1 chr12 132406914 ULK1 chr12 132406896 Exonic hg19 NA BG820543 Out-of-frame Intra-chr q24.33 Other:ULK q24.33 Other:ULK 125365 ChimerSeq ChiTaRs ChiTaRs ETFA-SCO1 ETFA chr15 76578763 SCO1 chr17 10596142 Exonic hg19 NA AL135593 Out-of-frame Inter-chr q24.3 p13.1 125366 ChimerSeq ChiTaRs ChiTaRs NAPB-EDEM2 NAPB chr20 23356179 EDEM2 chr20 33703350 Exonic hg19 NA BE938093 Out-of-frame Intra-chr p11.21 q11.22 125367 ChimerSeq ChiTaRs ChiTaRs KRT1-TMPO KRT1 chr12 53068614 TMPO chr12 98943554 Exonic hg19 NA AJ293393 Out-of-frame Intra-chr q13.13 q23.1 125368 ChimerSeq ChiTaRs ChiTaRs SART1-ITIH4 SART1 chr11 65746532 ITIH4 chr3 52858446 Exonic hg19 NA AI133253 Out-of-frame Inter-chr q13.1 p21.1 125369 ChimerSeq ChiTaRs ChiTaRs AKAP13-ZFYVE1 AKAP13 chr15 86135267 ZFYVE1 chr14 73436160 Exonic hg19 NA N81203 Out-of-frame Inter-chr q25.3 q24.2 125370 ChimerSeq ChiTaRs ChiTaRs PQLC1-PQLC1 PQLC1 chr18 77664841 PQLC1 chr18 77665211 Exonic hg19 NA BU952603 Out-of-frame Intra-chr q23 q23 125371 ChimerSeq ChiTaRs ChiTaRs KPNB1-KPNB1 KPNB1 chr17 45750908 KPNB1 chr17 45752078 Exonic hg19 NA BQ212023 Out-of-frame Intra-chr q21.32 q21.32 125372 ChimerSeq ChiTaRs ChiTaRs NEAT1-NEAT1 NEAT1 chr11 65193408 NEAT1 chr11 65193402 Exonic hg19 NA AA746913 Out-of-frame Intra-chr q13.1 q13.1 125373 ChimerSeq ChiTaRs ChiTaRs CCNDBP1-AMZ2 CCNDBP1 chr15 43483783 AMZ2 chr17 66244483 Exonic hg19 NA BI029353 Out-of-frame Inter-chr q15.2 Tumor suppressor gene q24.2 125374 ChimerSeq ChiTaRs ChiTaRs TPD52L2-TPD52L2 TPD52L2 chr20 62522517 TPD52L2 chr20 62522559 Exonic hg19 NA BF815403 Out-of-frame Intra-chr q13.33 q13.33 125375 ChimerSeq ChiTaRs ChiTaRs DPF2-SART1 DPF2 chr11 65101389 SART1 chr11 65742592 Exonic hg19 NA AK056223 Out-of-frame Intra-chr q13.1 q13.1 125376 ChimerSeq ChiTaRs ChiTaRs PTPN2-PPARGC1B PTPN2 chr18 12833562 PPARGC1B chr5 149230758 Exonic hg19 NA BF370483 Out-of-frame Inter-chr p11.21 Tumor suppressor gene q32 125377 ChimerSeq ChiTaRs ChiTaRs RNASEK-C17orf49-GTF2E2 RNASEK-C17orf49 chr17 6917708 GTF2E2 chr8 30438064 Exonic hg19 NA AI354403 Out-of-frame Inter-chr p13.1 p12 125378 ChimerSeq ChiTaRs ChiTaRs COMT-COMT COMT chr22 19951284 COMT chr22 19951702 Exonic hg19 NA AI298713 Out-of-frame Intra-chr q11.21 q11.21 125379 ChimerSeq ChiTaRs ChiTaRs BOLA2-WDTC1 BOLA2 chr16 29999730 WDTC1 chr1 27632670 Exonic hg19 NA BQ022953 Out-of-frame Inter-chr p11.2 p36.11 125380 ChimerSeq ChiTaRs ChiTaRs ATP1A3-CNBP ATP1A3 chr19 42474365 CNBP chr3 128888769 Exonic hg19 NA AV733123 Out-of-frame Inter-chr q13.2 q21.3 125381 ChimerSeq ChiTaRs ChiTaRs PACS1-NBEAL1 PACS1 chr11 65898182 NBEAL1 chr2 204055728 Exonic hg19 NA AK098493 Out-of-frame Inter-chr q13.1 q33.2 125382 ChimerSeq ChiTaRs ChiTaRs CDR2L-PEPD CDR2L chr17 73002233 PEPD chr19 33949161 Exonic hg19 NA BM669783 Out-of-frame Inter-chr q25.1 q13.11 125383 ChimerSeq ChiTaRs ChiTaRs GLG1-ERBB3 GLG1 chr16 74497301 ERBB3 chr12 56481687 Exonic hg19 NA BG983173 Out-of-frame Inter-chr q23.1 q13.2 Oncogene 125384 ChimerSeq ChiTaRs ChiTaRs PHLDB1-SNAP47 PHLDB1 chr11 118527446 SNAP47 chr1 227965584 Exonic hg19 NA BQ335163 Out-of-frame Inter-chr q23.3 q42.13 125385 ChimerSeq ChiTaRs ChiTaRs WWOX-ASPM WWOX chr16 78202411 ASPM chr1 197055804 Exonic hg19 NA AI064733 Out-of-frame Inter-chr q23.1 Tumor suppressor gene q31.3 125386 ChimerSeq ChiTaRs ChiTaRs POFUT1-CCDC50 POFUT1 chr20 30822849 CCDC50 chr3 191089119 Exonic hg19 NA AI970153 Out-of-frame Inter-chr q11.21 q28 125387 ChimerSeq ChiTaRs ChiTaRs NEDD4L-NEDD4L NEDD4L chr18 55757459 NEDD4L chr18 55758003 Exonic hg19 NA CV373443 Out-of-frame Intra-chr q21.31 Tumor suppressor gene q21.31 Tumor suppressor gene 125388 ChimerSeq ChiTaRs ChiTaRs RPS19-DCAF8 RPS19 chr19 42365223 DCAF8 chr1 160209269 Exonic hg19 NA DB116923 Out-of-frame Inter-chr q13.2 q23.2 125389 ChimerSeq ChiTaRs ChiTaRs APP-APP APP chr21 27284272 APP chr21 27326749 Exonic hg19 NA BE819323 Out-of-frame Intra-chr q21.3 q21.3 125390 ChimerSeq ChiTaRs ChiTaRs TEAD4-TEAD4 TEAD4 chr12 3104429 TEAD4 chr12 3103970 Exonic hg19 NA BE731603 Out-of-frame Intra-chr p13.33 Transcription factor p13.33 Transcription factor 125391 ChimerSeq ChiTaRs ChiTaRs ITGAL-ITGAL ITGAL chr16 30501145 ITGAL chr16 30507800 Exonic hg19 NA AW578803 Out-of-frame Intra-chr p11.2 p11.2 125392 ChimerSeq ChiTaRs ChiTaRs LEMD3-MAPK14 LEMD3 chr12 65563864 MAPK14 chr6 35995917 Exonic hg19 NA L35253 Out-of-frame Inter-chr q14.3 p21.31 125393 ChimerSeq ChiTaRs ChiTaRs NLK-NLK NLK chr17 26490630 NLK chr17 26490605 Exonic hg19 NA CN280773 Out-of-frame Intra-chr q11.2 CMGC:MAPK q11.2 CMGC:MAPK 125394 ChimerSeq ChiTaRs ChiTaRs BPTF-WTAP BPTF chr17 65944696 WTAP chr6 160169268 Exonic hg19 NA BQ364113 Out-of-frame Inter-chr q24.2 Transcription factor q25.3 125395 ChimerSeq ChiTaRs ChiTaRs TNFAIP8L1-BAZ2B TNFAIP8L1 chr19 4654909 BAZ2B chr2 160242964 Exonic hg19 NA AW577463 Out-of-frame Inter-chr p13.3 q24.2 Transcription factor 125396 ChimerSeq ChiTaRs ChiTaRs TMPO-ARPC1A TMPO chr12 98928857 ARPC1A chr7 98957174 Exonic hg19 NA AW821163 Out-of-frame Inter-chr q23.1 q22.1 125397 ChimerSeq ChiTaRs ChiTaRs HOMER3-HOMER3 HOMER3 chr19 19039072 HOMER3 chr19 19039077 Exonic hg19 NA BQ345853 Out-of-frame Intra-chr p13.11 p13.11 125398 ChimerSeq ChiTaRs ChiTaRs DDX6-ROBO1 DDX6 chr11 118661846 ROBO1 chr3 78766603 Exonic hg19 NA DN997510 Out-of-frame Inter-chr q23.3 p12.3 Tumor suppressor gene 125399 ChimerSeq ChiTaRs ChiTaRs C1QTNF1-C1QTNF1 C1QTNF1 chr17 77043757 C1QTNF1 chr17 77044024 Exonic hg19 NA BG979353 Out-of-frame Intra-chr q25.3 q25.3 125400 ChimerSeq ChiTaRs ChiTaRs RILPL2-RILPL2 RILPL2 chr12 123900078 RILPL2 chr12 123900083 Exonic hg19 NA CA310753 Out-of-frame Intra-chr q24.31 q24.31 125401 ChimerSeq ChiTaRs ChiTaRs PIK3R2-PIK3R2 PIK3R2 chr19 18287982 PIK3R2 chr19 18288001 Exonic hg19 NA BF897883 Out-of-frame Intra-chr p13.11 Oncogene p13.11 Oncogene 125402 ChimerSeq ChiTaRs ChiTaRs FKBP2-TRIM8 FKBP2 chr11 64011598 TRIM8 chr10 104416581 Exonic hg19 NA BQ009803 Out-of-frame Inter-chr q13.1 q24.32 125403 ChimerSeq ChiTaRs ChiTaRs CYB5B-ALAS2 CYB5B chr16 69496744 ALAS2 chrX 55035491 Exonic hg19 NA AF130113 Out-of-frame Inter-chr q22.1 p11.21 125404 ChimerSeq ChiTaRs ChiTaRs TM9SF1-SEPN1 TM9SF1 chr14 24675092 SEPN1 chr1 26143972 Exonic hg19 NA BM826473 Out-of-frame Inter-chr q12 125405 ChimerSeq ChiTaRs ChiTaRs CLIP1-DPP9 CLIP1 chr12 122876563 DPP9 chr19 4717148 Exonic hg19 NA BF369453 Out-of-frame Inter-chr q24.31 p13.3 125406 ChimerSeq ChiTaRs ChiTaRs PRMT8-AGAP3 PRMT8 chr12 3507386 AGAP3 chr7 150820881 Exonic hg19 NA DA749093 Out-of-frame Inter-chr p13.32 q36.1 125407 ChimerSeq ChiTaRs ChiTaRs FOS-LGALS3BP FOS chr14 75745631 LGALS3BP chr17 76969233 Exonic hg19 NA DB255923 Out-of-frame Inter-chr q24.3 Transcription factor q25.3 125408 ChimerSeq ChiTaRs ChiTaRs RPL13A-FZD7 RPL13A chr19 49995565 FZD7 chr2 202902537 Exonic hg19 NA BU683473 Out-of-frame Inter-chr q13.33 q33.1 125409 ChimerSeq ChiTaRs ChiTaRs BCAM-FAM134C BCAM chr19 45324574 FAM134C chr17 40731552 Exonic hg19 NA BG953583 Out-of-frame Inter-chr q13.32 125410 ChimerSeq ChiTaRs ChiTaRs SIK3-GBP1 SIK3 chr11 116748920 GBP1 chr1 89519031 Exonic hg19 NA BE698343 Out-of-frame Inter-chr q23.3 p22.2 Tumor suppressor gene 125411 ChimerSeq ChiTaRs ChiTaRs SRGAP1-PPM1H SRGAP1 chr12 64238664 PPM1H chr12 63195839 Exonic hg19 NA KF179301 Out-of-frame Intra-chr q14.2 q14.2 125412 ChimerSeq ChiTaRs ChiTaRs MPRIP-NTRK1 MPRIP chr17 17080727 NTRK1 chr1 156845311 Exonic hg19 NA KF724384 Out-of-frame Inter-chr p11.2 q23.1 Oncogene KB Pub 125413 ChimerSeq ChiTaRs ChiTaRs BCR-GOLPH3L BCR chr22 23615962 GOLPH3L chr1 150650558 Exonic hg19 NA EU154998 Out-of-frame Inter-chr q11.23 Atypical:BCR Oncogene Tumor suppressor gene q21.3 125414 ChimerSeq ChiTaRs ChiTaRs ZC3H4-ZC3H4 ZC3H4 chr19 47571071 ZC3H4 chr19 47588580 Exonic hg19 NA X58238 Out-of-frame Intra-chr q13.32 q13.32 125415 ChimerSeq ChiTaRs ChiTaRs RUNX1-CBFA2T2 RUNX1 chr21 36231874 CBFA2T2 chr20 32161779 Exonic hg19 NA GU086368 CDS-5'UTR Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q11.21 125416 ChimerSeq ChiTaRs ChiTaRs FLI1-EWSR1 FLI1 chr11 128659606 EWSR1 chr22 29683933 Exonic hg19 NA AJ229260 Out-of-frame Inter-chr q24.3 Oncogene Transcription factor q12.2 KB Pub 125417 ChimerSeq ChiTaRs ChiTaRs FLI1-EWSR1 FLI1 chr11 128653521 EWSR1 chr22 29683664 Exonic hg19 NA AJ229265 Out-of-frame Inter-chr q24.3 Oncogene Transcription factor q12.2 KB Pub 125418 ChimerSeq ChiTaRs ChiTaRs DNAJA2-NETO2 DNAJA2 chr16 47007483 NETO2 chr16 47117135 Exonic hg19 NA KF612913 Out-of-frame Intra-chr q11.2 q12.1 KB Pub 125419 ChimerSeq ChiTaRs ChiTaRs RPL27-NME2 RPL27 chr17 41154765 NME2 chr17 49248882 Exonic hg19 NA FJ655906 Out-of-frame Intra-chr q21.31 q21.33 Transcription factor 125420 ChimerSeq ChiTaRs ChiTaRs MYH9-USP6 MYH9 chr22 36783984 USP6 chr17 5033659 Exonic hg19 NA HQ326701 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene p13.2 KB Pub 125421 ChimerSeq ChiTaRs ChiTaRs FLI1-EWSR1 FLI1 chr11 128647310 EWSR1 chr22 29684764 Exonic hg19 NA AJ229263 Out-of-frame Inter-chr q24.3 Oncogene Transcription factor q12.2 KB Pub 125422 ChimerSeq ChiTaRs ChiTaRs FLI1-EWSR1 FLI1 chr11 128646994 EWSR1 chr22 29684685 Exonic hg19 NA AJ229256 Out-of-frame Inter-chr q24.3 Oncogene Transcription factor q12.2 KB Pub 125423 ChimerSeq ChiTaRs ChiTaRs BCRP3-ABL1 BCRP3 chr22 25041692 ABL1 chr9 133659336 Exonic hg19 NA EU394716 Out-of-frame Inter-chr q11.23 q34.12 TK:Abl Oncogene 125424 ChimerSeq ChiTaRs ChiTaRs TFPT-MAP3K13 TFPT chr19 54618673 MAP3K13 chr3 185125662 Exonic hg19 NA BC007776 Out-of-frame Inter-chr q27.2 125425 ChimerSeq ChiTaRs ChiTaRs RNF213-PPM1L RNF213 chr17 78368151 PPM1L chr3 160744481 Exonic hg19 NA AK025676 Out-of-frame Inter-chr q25.3 Oncogene q25.33 Tumor suppressor gene 125426 ChimerSeq ChiTaRs ChiTaRs TFPT-MAP3K13 TFPT chr19 54618687 MAP3K13 chr3 185125658 Exonic hg19 NA BC004281 Out-of-frame Inter-chr q27.2 125427 ChimerSeq ChiTaRs ChiTaRs TNK1-TMEM256 TNK1 chr17 7290473 TMEM256 chr17 7306658 Exonic hg19 NA HQ696959 Out-of-frame Intra-chr TK:Ack Tumor suppressor gene 125428 ChimerSeq ChiTaRs ChiTaRs SPECC1-VPS54 SPECC1 chr17 20217959 VPS54 chr2 64175552 Exonic hg19 NA BC021123 Out-of-frame Inter-chr p11.2 p14 125429 ChimerSeq ChiTaRs ChiTaRs CRTC1-SORCS2 CRTC1 chr19 18910251 SORCS2 chr4 7558380 Exonic hg19 NA AC003107 Out-of-frame Inter-chr p13.11 Oncogene p16.1 125430 ChimerSeq ChiTaRs ChiTaRs SCAF11-CTNNB1 SCAF11 chr12 46325288 CTNNB1 chr3 41277163 Exonic hg19 NA AF130085 Out-of-frame Inter-chr q12 p22.1 Oncogene 125431 ChimerSeq ChiTaRs ChiTaRs CREBBP-TNR CREBBP chr16 3778291 TNR chr1 175441100 Exonic hg19 NA U89354 Out-of-frame Inter-chr p13.3 Oncogene Tumor suppressor gene q25.1 125432 ChimerSeq ChiTaRs ChiTaRs NME1-NME2 NME1 chr17 51162089 NME2 chr17 51165435 Exonic hg19 NA BC107894 Out-of-frame Intra-chr q21.33 Tumor suppressor gene q21.33 Transcription factor 125433 ChimerSeq ChiTaRs ChiTaRs MEF2B-MEF2BNB MEF2B chr19 19170289 MEF2BNB chr19 19176904 Exonic hg19 NA BC126245 Out-of-frame Intra-chr p13.11 Transcription factor 125434 ChimerSeq ChiTaRs ChiTaRs TNFSF12-TNFSF13 TNFSF12 chr17 7557890 TNFSF13 chr17 7558292 Exonic hg19 NA BC156811 Out-of-frame Intra-chr p13.1 Tumor suppressor gene p13.1 125435 ChimerSeq ChiTaRs ChiTaRs PPAN-P2RY11 PPAN chr19 10111299 P2RY11 chr19 10111521 Exonic hg19 NA BC167833 Out-of-frame Intra-chr p13.2 p13.2 125436 ChimerSeq ChiTaRs ChiTaRs TMEM189-UBE2V1 TMEM189 chr20 50153798 UBE2V1 chr20 50081124 Exonic hg19 NA BC172339 Out-of-frame Intra-chr q13.13 q13.13 125437 ChimerSeq ChiTaRs ChiTaRs JMJD7-PLA2G4B JMJD7 chr15 41837587 PLA2G4B chr15 41838813 Exonic hg19 NA BC172355 Out-of-frame Intra-chr q15.1 q15.1 125438 ChimerSeq ChiTaRs ChiTaRs PRR5-ARHGAP8 PRR5 chr22 44737681 ARHGAP8 chr22 44752558 Exonic hg19 NA HQ258425 Out-of-frame Intra-chr q13.31 Tumor suppressor gene q13.31 125439 ChimerSeq ChiTaRs ChiTaRs PTGES3L-AARSD1 PTGES3L chr17 42980528 AARSD1 chr17 42950526 Exonic hg19 NA NM6777215 Out-of-frame Intra-chr q21.31 q21.31 125440 ChimerSeq ChiTaRs ChiTaRs ZNF559-ZNF177 ZNF559 chr19 9343845 ZNF177 chr19 9363020 Exonic hg19 NA NM6777215 Out-of-frame Intra-chr p13.2 Transcription factor p13.2 Transcription factor 125441 ChimerSeq ChiTaRs ChiTaRs KLRC4-KLRK1 KLRC4 chr12 10409757 KLRK1 chr12 10372353 Exonic hg19 NA NM6777215 Out-of-frame Intra-chr p13.2 p13.2 125442 ChimerSeq ChiTaRs ChiTaRs SCARNA16-SEC14L1 SCARNA16 chr17 77089493 SEC14L1 chr17 77088643 Exonic hg19 NA NM6777215 Out-of-frame Intra-chr p16.2 q25.2 125443 ChimerSeq ChiTaRs ChiTaRs RPL13A-ACTG1 RPL13A chr19 49492308 ACTG1 chr17 81509971 Exonic hg19 NA BM838228 Out-of-frame Inter-chr q13.33 q25.3 125444 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-AJ-A3NC-11A 3 3'UTR-3'UTR Inter-chr 125445 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-AJ-A3NC-11A 2 Out-of-Frame Inter-chr p15.33 125446 ChimerSeq FusionScan TCGA RNA-Seq RALGDS-MED16 RALGDS chr9 135977324 - MED16 chr19 868946 - Exonic hg19 Non-Cancer TCGA-FL-A1YM-11A 2 Out-of-Frame Inter-chr Oncogene q34.2 125447 ChimerSeq FusionScan TCGA RNA-Seq HACL1-COLQ HACL1 chr3 15604864 - COLQ chr3 15531144 - Exonic hg19 Non-Cancer TCGA-FL-A1YL-11A 2 Out-of-Frame Inter-chr p25.1 125448 ChimerSeq FusionScan TCGA RNA-Seq AFG3L2-TRIM22 AFG3L2 chr18 12344130 - TRIM22 chr11 5719544 + Exonic hg19 Non-Cancer TCGA-FL-A1YF-11A 2 In-Frame Inter-chr p11.21 125449 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173036437 - Exonic hg19 Non-Cancer TCGA-FL-A1YN-11A 2 Out-of-Frame Inter-chr p15.33 125450 ChimerSeq FusionScan TCGA RNA-Seq PTPN12-UBR1 PTPN12 chr7 77230123 + UBR1 chr15 43294902 - Exonic hg19 Non-Cancer TCGA-BG-A2AD-11A 2 In-Frame Inter-chr Tumor suppressor gene q11.23 125451 ChimerSeq FusionScan TCGA RNA-Seq RPL5-GNAI3 RPL5 chr1 93297674 + GNAI3 chr1 110116358 + Exonic hg19 Non-Cancer TCGA-AX-A0J0-11A 2 Out-of-Frame Inter-chr Tumor suppressor gene p22.1 125452 ChimerSeq FusionScan TCGA RNA-Seq SEPT7-FNDC3B SEPT7 chr7 35840882 + FNDC3B chr3 172046741 + Exonic hg19 Non-Cancer TCGA-AX-A0J0-11A 2 In-Frame Inter-chr p14.2 125453 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-BG-A3EW-11A 2 Out-of-Frame Inter-chr p15.33 125454 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-FL-A1YV-11A 2 Out-of-Frame Inter-chr p15.33 125455 ChimerSeq FusionScan TCGA RNA-Seq ARSG-PRKAR1A ARSG chr17 66397591 + PRKAR1A chr17 66511534 + Exonic hg19 Non-Cancer TCGA-FL-A1YI-11A 2 CDS-5'UTR Inter-chr q24.2 Oncogene Tumor suppressor gene 125456 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-FL-A1YI-11A 2 3'UTR-3'UTR Inter-chr 125457 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-FL-A1YU-11A 2 Out-of-Frame Inter-chr p15.33 125458 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-DI-A2QU-11A 2 3'UTR-3'UTR Inter-chr 125459 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-AX-A05Y-11A 2 3'UTR-3'UTR Inter-chr 125460 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-HC-8262-11A 2 Out-of-Frame Inter-chr p15.33 125461 ChimerSeq FusionScan TCGA RNA-Seq RNF216-RBAK-LOC389458 RNF216 chr7 5769062 - RBAK-LOC389458 chr7 5087663 + Exonic hg19 Non-Cancer TCGA-HC-8262-11A 2 CDS-5'UTR Inter-chr p22.1 Transcription factor 125462 ChimerSeq FusionScan TCGA RNA-Seq UAP1-C1orf61 UAP1 chr1 162536138 + C1orf61 chr1 156374393 - Exonic hg19 Non-Cancer TCGA-G9-6499-11A 4 Out-of-Frame Inter-chr q23.3 125463 ChimerSeq FusionScan TCGA RNA-Seq NBPF4-NBPF7 NBPF4 chr1 108779908 - NBPF7 chr1 120378831 - Exonic hg19 Non-Cancer TCGA-G9-6499-11A 2 In-Frame Inter-chr p13.3 125464 ChimerSeq FusionScan TCGA RNA-Seq MAPKAPK2-AXDND1 MAPKAPK2 chr1 206858853 + AXDND1 chr1 179497461 + Exonic hg19 Non-Cancer TCGA-G9-6499-11A 2 In-Frame Inter-chr CAMK:MAPKAPK q32.1 125465 ChimerSeq FusionScan TCGA RNA-Seq UAP1-C1orf61 UAP1 chr1 162536138 + C1orf61 chr1 156384545 - Exonic hg19 Non-Cancer TCGA-G9-6499-11A 2 Out-of-Frame Inter-chr q23.3 125466 ChimerSeq FusionScan TCGA RNA-Seq SFT2D2-TBX19 SFT2D2 chr1 168208398 + TBX19 chr1 168269659 + Exonic hg19 Non-Cancer TCGA-EJ-7331-11A 2 In-Frame Inter-chr q24.2 Transcription factor 125467 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-G9-6333-11A 3 3'UTR-3'UTR Inter-chr 125468 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-G9-6333-11A 2 Out-of-Frame Inter-chr p15.33 125469 ChimerSeq FusionScan TCGA RNA-Seq C21orf56-SLC39A14 C21orf56 chr21 47604269 - SLC39A14 chr8 22262208 + Exonic hg19 Non-Cancer TCGA-G9-6356-11A 2 5'UTR-5'UTR Inter-chr 125470 ChimerSeq FusionScan TCGA RNA-Seq PNPLA7-PNPLA6 PNPLA7 chr9 140358577 - PNPLA6 chr19 7622053 + Exonic hg19 Non-Cancer TCGA-HC-8260-11A 2 In-Frame Inter-chr q34.3 125471 ChimerSeq FusionScan TCGA RNA-Seq SMARCA2-SNTA1 SMARCA2 chr9 2088613 + SNTA1 chr20 32005729 - Exonic hg19 Non-Cancer TCGA-CH-5761-11A 2 Out-of-Frame Inter-chr Tumor suppressor gene p24.3 125472 ChimerSeq FusionScan TCGA RNA-Seq SFT2D2-TBX19 SFT2D2 chr1 168208398 + TBX19 chr1 168269659 + Exonic hg19 Non-Cancer TCGA-EJ-7331-11A 2 In-Frame Inter-chr q24.2 Transcription factor 125473 ChimerSeq FusionScan TCGA RNA-Seq MFI2-ACTG1 MFI2 chr3 196730771 - ACTG1 chr17 79479386 - Exonic hg19 Non-Cancer TCGA-HC-7747-11A 2 CDS-5'UTR Inter-chr 125474 ChimerSeq FusionScan TCGA RNA-Seq SKAP1-HSD17B4 SKAP1 chr17 46474041 - HSD17B4 chr5 118872117 + Exonic hg19 Non-Cancer TCGA-HC-7747-11A 2 Out-of-Frame Inter-chr q21.32 125475 ChimerSeq FusionScan TCGA RNA-Seq FAM18B1-FAM18B2-CDRT4 FAM18B1 chr17 18707579 + FAM18B2-CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer TCGA-HC-7737-11A 2 CDS-3'UTR Inter-chr 125476 ChimerSeq FusionScan TCGA RNA-Seq ST6GALNAC6-APBB2 ST6GALNAC6 chr9 130652915 - APBB2 chr4 40936716 - Exonic hg19 Non-Cancer TCGA-EJ-7785-11A 2 Out-of-Frame Inter-chr q34.11 125477 ChimerSeq FusionScan TCGA RNA-Seq SECISBP2-TOP2B SECISBP2 chr9 91934712 + TOP2B chr3 25656779 - Exonic hg19 Non-Cancer TCGA-EJ-7785-11A 2 Out-of-Frame Inter-chr q22.2 125478 ChimerSeq FusionScan TCGA RNA-Seq TRPV6-FOXN3 TRPV6 chr7 142583133 - FOXN3 chr14 89817152 - Exonic hg19 Non-Cancer TCGA-EJ-7785-11A 2 Out-of-Frame Inter-chr q34 Transcription factor 125479 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-HC-8262-11A 2 Out-of-Frame Inter-chr p15.33 125480 ChimerSeq FusionScan TCGA RNA-Seq RNF216-RBAK-LOC389458 RNF216 chr7 5769062 - RBAK-LOC389458 chr7 5087663 + Exonic hg19 Non-Cancer TCGA-HC-8262-11A 2 CDS-5'UTR Inter-chr p22.1 Transcription factor 125481 ChimerSeq FusionScan TCGA RNA-Seq ST6GALNAC6-APBB2 ST6GALNAC6 chr9 130652915 - APBB2 chr4 40936716 - Exonic hg19 Non-Cancer TCGA-EJ-7785-11A 2 Out-of-Frame Inter-chr q34.11 125482 ChimerSeq FusionScan TCGA RNA-Seq SECISBP2-TOP2B SECISBP2 chr9 91934712 + TOP2B chr3 25656779 - Exonic hg19 Non-Cancer TCGA-EJ-7785-11A 2 Out-of-Frame Inter-chr q22.2 125483 ChimerSeq FusionScan TCGA RNA-Seq TRPV6-FOXN3 TRPV6 chr7 142583133 - FOXN3 chr14 89817152 - Exonic hg19 Non-Cancer TCGA-EJ-7785-11A 2 Out-of-Frame Inter-chr q34 Transcription factor 125484 ChimerSeq FusionScan TCGA RNA-Seq WRB-SH3BGR WRB chr21 40763762 + SH3BGR chr21 40834300 + Exonic hg19 Non-Cancer TCGA-EJ-7786-11A 2 In-Frame Inter-chr q22.2 125485 ChimerSeq FusionScan TCGA RNA-Seq SMOC1-ERH SMOC1 chr14 70420249 + ERH chr14 69861629 - Exonic hg19 Non-Cancer TCGA-EJ-7786-11A 2 In-Frame Inter-chr q24.2 125486 ChimerSeq FusionScan TCGA RNA-Seq KLK4-PRSS36 KLK4 chr19 51411834 - PRSS36 chr16 31155158 - Exonic hg19 Non-Cancer TCGA-CH-5769-11A 2 Out-of-Frame Inter-chr q13.41 125487 ChimerSeq FusionScan TCGA RNA-Seq RHOA-QRICH1 RHOA chr3 49412866 - QRICH1 chr3 49084679 - Exonic hg19 Non-Cancer TCGA-EJ-7314-11A 2 In-Frame Inter-chr Oncogene Tumor suppressor gene p21.31 125488 ChimerSeq FusionScan TCGA RNA-Seq TFG-GPR128 TFG chr3 100438902 + GPR128 chr3 100348441 + Exonic hg19 Non-Cancer TCGA-EJ-7792-11A 2 In-Frame Inter-chr q12.2 125489 ChimerSeq FusionScan TCGA RNA-Seq KLK4-PRSS36 KLK4 chr19 51411834 - PRSS36 chr16 31155158 - Exonic hg19 Non-Cancer TCGA-EJ-7792-11A 2 Out-of-Frame Inter-chr q13.41 125490 ChimerSeq FusionScan TCGA RNA-Seq RHOA-QRICH1 RHOA chr3 49412866 - QRICH1 chr3 49084679 - Exonic hg19 Non-Cancer TCGA-EJ-7314-11A 2 In-Frame Inter-chr Oncogene Tumor suppressor gene p21.31 125491 ChimerSeq FusionScan TCGA RNA-Seq PNPLA7-PNPLA6 PNPLA7 chr9 140358577 - PNPLA6 chr19 7622053 + Exonic hg19 Non-Cancer TCGA-HC-8260-11A 2 In-Frame Inter-chr q34.3 125492 ChimerSeq FusionScan TCGA RNA-Seq UAP1-C1orf61 UAP1 chr1 162536138 + C1orf61 chr1 156374393 - Exonic hg19 Non-Cancer TCGA-G9-6499-11A 4 Out-of-Frame Inter-chr q23.3 125493 ChimerSeq FusionScan TCGA RNA-Seq NBPF4-NBPF7 NBPF4 chr1 108779908 - NBPF7 chr1 120378831 - Exonic hg19 Non-Cancer TCGA-G9-6499-11A 2 In-Frame Inter-chr p13.3 125494 ChimerSeq FusionScan TCGA RNA-Seq MAPKAPK2-AXDND1 MAPKAPK2 chr1 206858853 + AXDND1 chr1 179497461 + Exonic hg19 Non-Cancer TCGA-G9-6499-11A 2 In-Frame Inter-chr CAMK:MAPKAPK q32.1 125495 ChimerSeq FusionScan TCGA RNA-Seq UAP1-C1orf61 UAP1 chr1 162536138 + C1orf61 chr1 156384545 - Exonic hg19 Non-Cancer TCGA-G9-6499-11A 2 Out-of-Frame Inter-chr q23.3 125496 ChimerSeq FusionScan TCGA RNA-Seq CACNA1G-CACNA1H CACNA1G chr17 48650215 + CACNA1H chr16 1250715 + Exonic hg19 Non-Cancer TCGA-EJ-7789-11A 2 In-Frame Inter-chr q21.33 125497 ChimerSeq FusionScan TCGA RNA-Seq WRB-SH3BGR WRB chr21 40763762 + SH3BGR chr21 40834300 + Exonic hg19 Non-Cancer TCGA-EJ-7327-11A 2 In-Frame Inter-chr q22.2 125498 ChimerSeq FusionScan TCGA RNA-Seq ZADH2-TSHZ1 ZADH2 chr18 72920804 - TSHZ1 chr18 72997402 + Exonic hg19 Non-Cancer TCGA-EJ-7327-11A 2 CDS-5'UTR Inter-chr q22.3 Transcription factor 125499 ChimerSeq FusionScan TCGA RNA-Seq STAM2-ANAPC1 STAM2 chr2 153032116 - ANAPC1 chr2 112530052 - Exonic hg19 Non-Cancer TCGA-G9-6363-11A 3 In-Frame Inter-chr q23.3 Tumor suppressor gene 125500 ChimerSeq FusionScan TCGA RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 - ERG chr21 39817544 - Exonic hg19 Non-Cancer TCGA-G9-6363-11A 3 5'UTR-CDS Inter-chr q22.3 Oncogene Transcription factor KB Pub Seq+ 125501 ChimerSeq FusionScan TCGA RNA-Seq CIR1-PPAP2A CIR1 chr2 175243650 - PPAP2A chr5 54771278 - Exonic hg19 Non-Cancer TCGA-G9-6363-11A 3 In-Frame Inter-chr q31.1 125502 ChimerSeq FusionScan TCGA RNA-Seq ATP5SL-ETHE1 ATP5SL chr19 41945786 - ETHE1 chr19 44015718 - Exonic hg19 Non-Cancer TCGA-G9-6363-11A 2 In-Frame Inter-chr q13.2 125503 ChimerSeq FusionScan TCGA RNA-Seq LRRC16A-EXOC2 LRRC16A chr6 25285137 + EXOC2 chr6 532610 - Exonic hg19 Non-Cancer TCGA-EJ-7330-11A 2 In-Frame Inter-chr 125504 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-EJ-7330-11A 2 3'UTR-3'UTR Inter-chr 125505 ChimerSeq FusionScan TCGA RNA-Seq STAM2-ANAPC1 STAM2 chr2 153032116 - ANAPC1 chr2 112530052 - Exonic hg19 Non-Cancer TCGA-G9-6363-11A 3 In-Frame Inter-chr q23.3 Tumor suppressor gene 125506 ChimerSeq FusionScan TCGA RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 - ERG chr21 39817544 - Exonic hg19 Non-Cancer TCGA-G9-6363-11A 3 5'UTR-CDS Inter-chr q22.3 Oncogene Transcription factor KB Pub Seq+ 125507 ChimerSeq FusionScan TCGA RNA-Seq CIR1-PPAP2A CIR1 chr2 175243650 - PPAP2A chr5 54771278 - Exonic hg19 Non-Cancer TCGA-G9-6363-11A 3 In-Frame Inter-chr q31.1 125508 ChimerSeq FusionScan TCGA RNA-Seq ATP5SL-ETHE1 ATP5SL chr19 41945786 - ETHE1 chr19 44015718 - Exonic hg19 Non-Cancer TCGA-G9-6363-11A 2 In-Frame Inter-chr q13.2 125509 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-EJ-7782-11A 2 Out-of-Frame Inter-chr p15.33 125510 ChimerSeq FusionScan TCGA RNA-Seq TFG-GPR128 TFG chr3 100438902 + GPR128 chr3 100348441 + Exonic hg19 Non-Cancer TCGA-CH-5767-11B 6 In-Frame Inter-chr q12.2 125511 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-CH-5767-11B 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125512 ChimerSeq FusionScan TCGA RNA-Seq ATP1A1OS-ATP1A1 ATP1A1OS chr1 116941621 - ATP1A1 chr1 116941242 + Exonic hg19 Non-Cancer TCGA-CH-5767-11B 2 3'UTR-CDS Inter-chr 125513 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-EJ-7797-11A 2 Out-of-Frame Inter-chr p15.33 125514 ChimerSeq FusionScan TCGA RNA-Seq ZCCHC2-TSHZ1 ZCCHC2 chr18 60191596 + TSHZ1 chr18 72997402 + Exonic hg19 Non-Cancer TCGA-EJ-7797-11A 2 CDS-5'UTR Inter-chr q21.33 Transcription factor 125515 ChimerSeq FusionScan TCGA RNA-Seq LRRC16A-EXOC2 LRRC16A chr6 25285137 + EXOC2 chr6 532610 - Exonic hg19 Non-Cancer TCGA-EJ-7330-11A 2 In-Frame Inter-chr 125516 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-EJ-7330-11A 2 3'UTR-3'UTR Inter-chr 125517 ChimerSeq FusionScan TCGA RNA-Seq KLK4-PRSS36 KLK4 chr19 51411834 - PRSS36 chr16 31155158 - Exonic hg19 Non-Cancer TCGA-HC-8259-11A 2 Out-of-Frame Inter-chr q13.41 125518 ChimerSeq FusionScan TCGA RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 - ERG chr21 39817544 - Exonic hg19 Non-Cancer TCGA-G9-6362-11A 8 5'UTR-CDS Inter-chr q22.3 Oncogene Transcription factor KB Pub Seq+ 125519 ChimerSeq FusionScan TCGA RNA-Seq ARIH2-USP9X ARIH2 chr3 48960244 + USP9X chrX 41089753 + Exonic hg19 Non-Cancer TCGA-G9-6362-11A 2 5'UTR-CDS Inter-chr p21.31 Oncogene 125520 ChimerSeq FusionScan TCGA RNA-Seq C21orf56-SLC39A14 C21orf56 chr21 47604269 - SLC39A14 chr8 22262208 + Exonic hg19 Non-Cancer TCGA-G9-6356-11A 2 5'UTR-5'UTR Inter-chr 125521 ChimerSeq FusionScan TCGA RNA-Seq ECE1-HP1BP3 ECE1 chr1 21571481 - HP1BP3 chr1 21097566 - Exonic hg19 Non-Cancer TCGA-EJ-7123-11A 2 In-Frame Inter-chr p36.12 125522 ChimerSeq FusionScan TCGA RNA-Seq PNPLA7-PNPLA6 PNPLA7 chr9 140358577 - PNPLA6 chr19 7622053 + Exonic hg19 Non-Cancer TCGA-HC-7752-11A 3 In-Frame Inter-chr q34.3 125523 ChimerSeq FusionScan TCGA RNA-Seq UNKL-CYHR1 UNKL chr16 1435208 - CYHR1 chr8 145678843 - Exonic hg19 Non-Cancer TCGA-HC-7752-11A 2 Out-of-Frame Inter-chr p13.3 125524 ChimerSeq FusionScan TCGA RNA-Seq UBE2D3-UBE2D2 UBE2D3 chr4 103723717 - UBE2D2 chr5 138994170 + Exonic hg19 Non-Cancer TCGA-HC-7752-11A 2 Out-of-Frame Inter-chr q24 125525 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-EJ-A8FO-11A 2 Out-of-Frame Inter-chr p15.33 125526 ChimerSeq FusionScan TCGA RNA-Seq PNPLA7-PNPLA6 PNPLA7 chr9 140358577 - PNPLA6 chr19 7622053 + Exonic hg19 Non-Cancer TCGA-HC-7752-11A 3 In-Frame Inter-chr q34.3 125527 ChimerSeq FusionScan TCGA RNA-Seq UNKL-CYHR1 UNKL chr16 1435208 - CYHR1 chr8 145678843 - Exonic hg19 Non-Cancer TCGA-HC-7752-11A 2 Out-of-Frame Inter-chr p13.3 125528 ChimerSeq FusionScan TCGA RNA-Seq UBE2D3-UBE2D2 UBE2D3 chr4 103723717 - UBE2D2 chr5 138994170 + Exonic hg19 Non-Cancer TCGA-HC-7752-11A 2 Out-of-Frame Inter-chr q24 125529 ChimerSeq FusionScan TCGA RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 - ERG chr21 39817544 - Exonic hg19 Non-Cancer TCGA-CH-5769-11A 9 5'UTR-CDS Inter-chr q22.3 Oncogene Transcription factor KB Pub Seq+ 125530 ChimerSeq FusionScan TCGA RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 - ERG chr21 39817544 - Exonic hg19 Non-Cancer TCGA-CH-5769-11A 2 In-Frame Inter-chr q22.3 Oncogene Transcription factor KB Pub Seq+ 125531 ChimerSeq FusionScan TCGA RNA-Seq KLK4-PRSS36 KLK4 chr19 51411834 - PRSS36 chr16 31155158 - Exonic hg19 Non-Cancer TCGA-CH-5769-11A 2 Out-of-Frame Inter-chr q13.41 125532 ChimerSeq FusionScan TCGA RNA-Seq WBP11-SARNP WBP11 chr12 14956285 - SARNP chr12 56154424 - Exonic hg19 Non-Cancer TCGA-HC-7819-11A 2 5'UTR-CDS Inter-chr p12.3 125533 ChimerSeq FusionScan TCGA RNA-Seq KLK4-PRSS36 KLK4 chr19 51411834 - PRSS36 chr16 31155158 - Exonic hg19 Non-Cancer TCGA-HC-7819-11A 2 Out-of-Frame Inter-chr q13.41 125534 ChimerSeq FusionScan TCGA RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 - ERG chr21 39817544 - Exonic hg19 Non-Cancer TCGA-G9-6362-11A 8 5'UTR-CDS Inter-chr q22.3 Oncogene Transcription factor KB Pub Seq+ 125535 ChimerSeq FusionScan TCGA RNA-Seq ARIH2-USP9X ARIH2 chr3 48960244 + USP9X chrX 41089753 + Exonic hg19 Non-Cancer TCGA-G9-6362-11A 2 5'UTR-CDS Inter-chr p21.31 Oncogene 125536 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-EJ-7797-11A 2 Out-of-Frame Inter-chr p15.33 125537 ChimerSeq FusionScan TCGA RNA-Seq ZCCHC2-TSHZ1 ZCCHC2 chr18 60191596 + TSHZ1 chr18 72997402 + Exonic hg19 Non-Cancer TCGA-EJ-7797-11A 2 CDS-5'UTR Inter-chr q21.33 Transcription factor 125538 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-EJ-7797-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125539 ChimerSeq FusionScan TCGA RNA-Seq WRB-SH3BGR WRB chr21 40763762 + SH3BGR chr21 40834300 + Exonic hg19 Non-Cancer TCGA-EJ-7786-11A 2 In-Frame Inter-chr q22.2 125540 ChimerSeq FusionScan TCGA RNA-Seq SMOC1-ERH SMOC1 chr14 70420249 + ERH chr14 69861629 - Exonic hg19 Non-Cancer TCGA-EJ-7786-11A 2 In-Frame Inter-chr q24.2 125541 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-EJ-7786-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125542 ChimerSeq FusionScan TCGA RNA-Seq SIK2-ALG9 SIK2 chr11 111473422 + ALG9 chr11 111680497 - Exonic hg19 Non-Cancer TCGA-HC-7747-11A 2 In-Frame Inter-chr q23.1 125543 ChimerSeq FusionScan TCGA RNA-Seq MFI2-ACTG1 MFI2 chr3 196730771 - ACTG1 chr17 79479386 - Exonic hg19 Non-Cancer TCGA-HC-7747-11A 2 CDS-5'UTR Inter-chr 125544 ChimerSeq FusionScan TCGA RNA-Seq SKAP1-HSD17B4 SKAP1 chr17 46474041 - HSD17B4 chr5 118872117 + Exonic hg19 Non-Cancer TCGA-HC-7747-11A 2 Out-of-Frame Inter-chr q21.32 125545 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-EJ-A8FO-11A 2 Out-of-Frame Inter-chr p15.33 125546 ChimerSeq FusionScan TCGA RNA-Seq CACNA1G-CACNA1H CACNA1G chr17 48650215 + CACNA1H chr16 1250715 + Exonic hg19 Non-Cancer TCGA-EJ-7789-11A 2 In-Frame Inter-chr q21.33 125547 ChimerSeq FusionScan TCGA RNA-Seq WBP11-SARNP WBP11 chr12 14956285 - SARNP chr12 56154424 - Exonic hg19 Non-Cancer TCGA-HC-7819-11A 2 5'UTR-CDS Inter-chr p12.3 125548 ChimerSeq FusionScan TCGA RNA-Seq KLK4-PRSS36 KLK4 chr19 51411834 - PRSS36 chr16 31155158 - Exonic hg19 Non-Cancer TCGA-HC-7819-11A 2 Out-of-Frame Inter-chr q13.41 125549 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-EJ-7125-11A 3 Out-of-Frame Inter-chr p15.33 125550 ChimerSeq FusionScan TCGA RNA-Seq DNAJC25-GNG10-UGCG DNAJC25-GNG10 chr9 114429226 + UGCG chr9 114676884 + Exonic hg19 Non-Cancer TCGA-EJ-7125-11A 2 Out-of-Frame Inter-chr q31.3 125551 ChimerSeq FusionScan TCGA RNA-Seq TFG-GPR128 TFG chr3 100438902 + GPR128 chr3 100348441 + Exonic hg19 Non-Cancer TCGA-EJ-7792-11A 2 In-Frame Inter-chr q12.2 125552 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-EJ-7792-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125553 ChimerSeq FusionScan TCGA RNA-Seq KLK4-PRSS36 KLK4 chr19 51411834 - PRSS36 chr16 31155158 - Exonic hg19 Non-Cancer TCGA-EJ-7792-11A 2 Out-of-Frame Inter-chr q13.41 125554 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-EJ-7782-11A 2 Out-of-Frame Inter-chr p15.33 125555 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-EJ-7782-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125556 ChimerSeq FusionScan TCGA RNA-Seq PNPLA7-PNPLA6 PNPLA7 chr9 140358577 - PNPLA6 chr19 7622053 + Exonic hg19 Non-Cancer TCGA-G9-6365-11A 2 In-Frame Inter-chr q34.3 125557 ChimerSeq FusionScan TCGA RNA-Seq SMARCA2-SNTA1 SMARCA2 chr9 2088613 + SNTA1 chr20 32005729 - Exonic hg19 Non-Cancer TCGA-CH-5761-11A 2 Out-of-Frame Inter-chr Tumor suppressor gene p24.3 125558 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-EJ-7125-11A 3 Out-of-Frame Inter-chr p15.33 125559 ChimerSeq FusionScan TCGA RNA-Seq DNAJC25-GNG10-UGCG DNAJC25-GNG10 chr9 114429226 + UGCG chr9 114676884 + Exonic hg19 Non-Cancer TCGA-EJ-7125-11A 2 Out-of-Frame Inter-chr q31.3 125560 ChimerSeq FusionScan TCGA RNA-Seq CEP192-SF3B3 CEP192 chr18 13069855 + SF3B3 chr16 70603908 + Exonic hg19 Non-Cancer TCGA-IC-A6RE-11A 2 Out-of-Frame Inter-chr p11.21 125561 ChimerSeq FusionScan TCGA RNA-Seq KLK13-TMPRSS9 KLK13 chr19 51561794 - TMPRSS9 chr19 2421851 + Exonic hg19 Non-Cancer TCGA-IC-A6RE-11A 2 In-Frame Inter-chr q13.41 125562 ChimerSeq FusionScan TCGA RNA-Seq RCC1-TRNAU1AP RCC1 chr1 28832596 + TRNAU1AP chr1 28891214 + Exonic hg19 Non-Cancer TCGA-IC-A6RE-11A 2 5'UTR-5'UTR Inter-chr p35.3 125563 ChimerSeq FusionScan TCGA RNA-Seq HEPH-KDM2A HEPH chrX 65382718 + KDM2A chr11 66982810 + Exonic hg19 Non-Cancer TCGA-IC-A6RE-11A 2 Out-of-Frame Inter-chr q12 Transcription factor 125564 ChimerSeq FusionScan TCGA RNA-Seq FAM83F-TNRC6B FAM83F chr22 40417967 + TNRC6B chr22 40513058 + Exonic hg19 Non-Cancer TCGA-IC-A6RE-11A 2 CDS-5'UTR Inter-chr q13.1 125565 ChimerSeq FusionScan TCGA RNA-Seq KLK13-CELA1 KLK13 chr19 51561794 - CELA1 chr12 51723617 - Exonic hg19 Non-Cancer TCGA-IC-A6RE-11A 2 In-Frame Inter-chr q13.41 125566 ChimerSeq FusionScan TCGA RNA-Seq MYH11-NDE1 MYH11 chr16 15818017 - NDE1 chr16 15818047 + Exonic hg19 Non-Cancer TCGA-IG-A3I8-11A 15 Out-of-Frame Inter-chr Oncogene 125567 ChimerSeq FusionScan TCGA RNA-Seq MYH11-MYH14 MYH11 chr16 15876241 - MYH14 chr19 50730159 + Exonic hg19 Non-Cancer TCGA-IG-A3I8-11A 11 In-Frame Inter-chr Oncogene 125568 ChimerSeq FusionScan TCGA RNA-Seq ACTN4-ACTN1 ACTN4 chr19 39195660 + ACTN1 chr14 69376759 - Exonic hg19 Non-Cancer TCGA-IG-A3I8-11A 5 In-Frame Inter-chr 125569 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-IG-A3I8-11A 5 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125570 ChimerSeq FusionScan TCGA RNA-Seq NCOR2-UBC NCOR2 chr12 125051853 - UBC chr12 125398320 - Exonic hg19 Non-Cancer TCGA-IG-A3I8-11A 2 5'UTR-5'UTR Inter-chr q24.31 125571 ChimerSeq FusionScan TCGA RNA-Seq SDHA-CDO1 SDHA chr5 228448 + CDO1 chr5 115141159 - Exonic hg19 Non-Cancer TCGA-IG-A3I8-11A 2 Out-of-Frame Inter-chr Oncogene Tumor suppressor gene p15.33 Tumor suppressor gene 125572 ChimerSeq FusionScan TCGA RNA-Seq WLS-DIRAS3 WLS chr1 68603462 - DIRAS3 chr1 68513045 - Exonic hg19 Non-Cancer TCGA-IG-A3I8-11A 2 CDS-5'UTR Inter-chr p31.3 Tumor suppressor gene 125573 ChimerSeq FusionScan TCGA RNA-Seq TYW3-CRYZ TYW3 chr1 75199102 + CRYZ chr1 75199092 - Exonic hg19 Non-Cancer TCGA-IG-A3I8-11A 2 CDS-5'UTR Inter-chr p31.1 125574 ChimerSeq FusionScan TCGA RNA-Seq SATB1-DAAM2 SATB1 chr3 18392804 - DAAM2 chr6 39835285 + Exonic hg19 Non-Cancer TCGA-IG-A3I8-11A 2 Out-of-Frame Inter-chr Transcription factor p24.3 125575 ChimerSeq FusionScan TCGA RNA-Seq SPIN3-SPIN1 SPIN3 chrX 57021155 - SPIN1 chr9 91083286 + Exonic hg19 Non-Cancer TCGA-IG-A3I8-11A 2 3'UTR-CDS Inter-chr p11.21 125576 ChimerSeq FusionScan TCGA RNA-Seq RBBP4-RBBP7 RBBP4 chr1 33134733 + RBBP7 chrX 16870998 - Exonic hg19 Non-Cancer TCGA-IG-A3I8-11A 2 In-Frame Inter-chr p35.1 Tumor suppressor gene 125577 ChimerSeq FusionScan TCGA RNA-Seq ZNF587B-ZNF154 ZNF587B chr19 58350517 + ZNF154 chr19 58216347 - Exonic hg19 Non-Cancer TCGA-V5-AASX-11A 6 Out-of-Frame Inter-chr Transcription factor q13.43 Transcription factor 125578 ChimerSeq FusionScan TCGA RNA-Seq ZNF417-ZNF587B ZNF417 chr19 58427746 - ZNF587B chr19 58350390 + Exonic hg19 Non-Cancer TCGA-V5-AASX-11A 6 In-Frame Inter-chr Transcription factor q13.43 Transcription factor 125579 ChimerSeq FusionScan TCGA RNA-Seq TRIM66-EHF TRIM66 chr11 8660200 - EHF chr11 34678454 + Exonic hg19 Non-Cancer TCGA-V5-AASX-11A 4 Out-of-Frame Inter-chr p15.4 Tumor suppressor gene Transcription factor 125580 ChimerSeq FusionScan TCGA RNA-Seq STAMBPL1-ACTA2 STAMBPL1 chr10 90670768 + ACTA2 chr10 90708710 - Exonic hg19 Non-Cancer TCGA-V5-AASX-11A 3 CDS-5'UTR Inter-chr q23.31 125581 ChimerSeq FusionScan TCGA RNA-Seq LRP5-LRP1 LRP5 chr11 68115711 + LRP1 chr12 57592247 + Exonic hg19 Non-Cancer TCGA-V5-AASX-11A 2 In-Frame Inter-chr q13.2 125582 ChimerSeq FusionScan TCGA RNA-Seq ZNF44-ZNF274 ZNF44 chr19 12385787 - ZNF274 chr19 58697078 + Exonic hg19 Non-Cancer TCGA-V5-AASX-11A 2 Out-of-Frame Inter-chr Transcription factor p13.2 Transcription factor 125583 ChimerSeq FusionScan TCGA RNA-Seq DIP2C-DIP2A-IT1 DIP2C chr10 735433 - DIP2A-IT1 chr21 47882978 + Exonic hg19 Non-Cancer TCGA-V5-AASX-11A 2 Out-of-Frame Inter-chr p15.3 125584 ChimerSeq FusionScan TCGA RNA-Seq EXOSC5-EIF3K EXOSC5 chr19 41903085 - EIF3K chr19 39125632 + Exonic hg19 Non-Cancer TCGA-V5-AASX-11A 2 In-Frame Inter-chr q13.2 125585 ChimerSeq FusionScan TCGA RNA-Seq TMEM63A-ACP2 TMEM63A chr1 226054811 - ACP2 chr11 47267385 - Exonic hg19 Non-Cancer TCGA-V5-AASX-11A 2 Out-of-Frame Inter-chr q42.12 125586 ChimerSeq FusionScan TCGA RNA-Seq STAMBPL1-ACTA2 STAMBPL1 chr10 90665417 + ACTA2 chr10 90708710 - Exonic hg19 Non-Cancer TCGA-V5-AASX-11A 2 CDS-5'UTR Inter-chr q23.31 125587 ChimerSeq FusionScan TCGA RNA-Seq FLII-AGR2 FLII chr17 18149247 - AGR2 chr7 16839441 - Exonic hg19 Non-Cancer TCGA-V5-AASX-11A 2 Out-of-Frame Inter-chr 125588 ChimerSeq FusionScan TCGA RNA-Seq RSU1-USP10 RSU1 chr10 16794537 - USP10 chr16 84792321 + Exonic hg19 Non-Cancer TCGA-V5-AASX-11A 2 In-Frame Inter-chr p13 125589 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-L5-A4OQ-11A 3 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125590 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-L5-A4OQ-11A 3 3'UTR-3'UTR Inter-chr 125591 ChimerSeq FusionScan TCGA RNA-Seq MYH11-MYH14 MYH11 chr16 15876241 - MYH14 chr19 50730159 + Exonic hg19 Non-Cancer TCGA-L5-A4OQ-11A 3 In-Frame Inter-chr Oncogene 125592 ChimerSeq FusionScan TCGA RNA-Seq MYH11-NDE1 MYH11 chr16 15818017 - NDE1 chr16 15818047 + Exonic hg19 Non-Cancer TCGA-L5-A4OQ-11A 3 Out-of-Frame Inter-chr Oncogene 125593 ChimerSeq FusionScan TCGA RNA-Seq WRB-SH3BGR WRB chr21 40763762 + SH3BGR chr21 40834300 + Exonic hg19 Non-Cancer TCGA-L5-A4OQ-11A 2 In-Frame Inter-chr q22.2 125594 ChimerSeq FusionScan TCGA RNA-Seq SMARCA2-SMARCA4 SMARCA2 chr9 2182242 + SMARCA4 chr19 11170428 + Exonic hg19 Non-Cancer TCGA-L5-A4OQ-11A 2 In-Frame Inter-chr Tumor suppressor gene p24.3 Oncogene Tumor suppressor gene 125595 ChimerSeq FusionScan TCGA RNA-Seq TMEM189-MMP23B TMEM189 chr20 48744511 - MMP23B chr1 1568566 + Exonic hg19 Non-Cancer TCGA-L5-A4OQ-11A 2 In-Frame Inter-chr q13.13 125596 ChimerSeq FusionScan TCGA RNA-Seq ST7-ST7-OT3 ST7 chr7 116778586 + ST7-OT3 chr7 116829374 + Exonic hg19 Non-Cancer TCGA-L5-A4OQ-11A 2 Out-of-Frame Inter-chr Tumor suppressor gene q31.2 Tumor suppressor gene 125597 ChimerSeq FusionScan TCGA RNA-Seq ZNF417-ZNF587B ZNF417 chr19 58427746 - ZNF587B chr19 58350390 + Exonic hg19 Non-Cancer TCGA-L5-A4OQ-11A 2 In-Frame Inter-chr Transcription factor q13.43 Transcription factor 125598 ChimerSeq FusionScan TCGA RNA-Seq LTBP1-SWAP70 LTBP1 chr2 33246273 + SWAP70 chr11 9715692 + Exonic hg19 Non-Cancer TCGA-L5-A4OQ-11A 2 Out-of-Frame Inter-chr p22.3 125599 ChimerSeq FusionScan TCGA RNA-Seq ANKRD36B-ANKRD36 ANKRD36B chr2 98158373 - ANKRD36 chr2 97852934 + Exonic hg19 Non-Cancer TCGA-L5-A4OF-11A 3 In-Frame Inter-chr q11.2 125600 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-L5-A4OF-11A 3 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125601 ChimerSeq FusionScan TCGA RNA-Seq MYH11-NDE1 MYH11 chr16 15818017 - NDE1 chr16 15818047 + Exonic hg19 Non-Cancer TCGA-L5-A4OQ-11A 8 Out-of-Frame Inter-chr Oncogene 125602 ChimerSeq FusionScan TCGA RNA-Seq COL1A2-MDN1 COL1A2 chr7 94057197 + MDN1 chr6 90459088 - Exonic hg19 Non-Cancer TCGA-L5-A4OQ-11A 4 Out-of-Frame Inter-chr q21.3 125603 ChimerSeq FusionScan TCGA RNA-Seq WRB-SH3BGR WRB chr21 40763762 + SH3BGR chr21 40834300 + Exonic hg19 Non-Cancer TCGA-L5-A4OQ-11A 2 In-Frame Inter-chr q22.2 125604 ChimerSeq FusionScan TCGA RNA-Seq BOLA3-AS1-MTHFD2 BOLA3-AS1 chr2 74375605 + MTHFD2 chr2 74432831 + Exonic hg19 Non-Cancer TCGA-L5-A4OQ-11A 2 Out-of-Frame Inter-chr p13.1 Tumor suppressor gene 125605 ChimerSeq FusionScan TCGA RNA-Seq SMARCA2-SMARCA4 SMARCA2 chr9 2182242 + SMARCA4 chr19 11170428 + Exonic hg19 Non-Cancer TCGA-L5-A4OQ-11A 2 In-Frame Inter-chr Tumor suppressor gene p24.3 Oncogene Tumor suppressor gene 125606 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-L5-A4OQ-11A 2 3'UTR-3'UTR Inter-chr 125607 ChimerSeq FusionScan TCGA RNA-Seq PRUNE2-VPS13A PRUNE2 chr9 79438547 - VPS13A chr9 80018151 + Exonic hg19 Non-Cancer TCGA-L5-A4OQ-11A 2 In-Frame Inter-chr q21.2 125608 ChimerSeq FusionScan TCGA RNA-Seq NCOR2-UBC NCOR2 chr12 125051853 - UBC chr12 125398320 - Exonic hg19 Non-Cancer TCGA-IC-A6RF-11A 3 5'UTR-5'UTR Inter-chr q24.31 125609 ChimerSeq FusionScan TCGA RNA-Seq TGM6-GRIK3 TGM6 chr20 2398219 + GRIK3 chr1 37282878 - Exonic hg19 Non-Cancer TCGA-IC-A6RF-11A 3 In-Frame Inter-chr p13 125610 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-IC-A6RF-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125611 ChimerSeq FusionScan TCGA RNA-Seq VPS13B-STK3 VPS13B chr8 100712160 + STK3 chr8 99560389 - Exonic hg19 Non-Cancer TCGA-IC-A6RF-11A 2 Out-of-Frame Inter-chr q22.2 125612 ChimerSeq FusionScan TCGA RNA-Seq TGM6-GRIK1 TGM6 chr20 2398219 + GRIK1 chr21 30949501 - Exonic hg19 Non-Cancer TCGA-IC-A6RF-11A 2 In-Frame Inter-chr p13 125613 ChimerSeq FusionScan TCGA RNA-Seq PGA3-PGC PGA3 chr11 60971741 + PGC chr6 41705566 - Exonic hg19 Non-Cancer TCGA-L5-A43C-11A 4 In-Frame Inter-chr q12.2 125614 ChimerSeq FusionScan TCGA RNA-Seq PGA3-PGC PGA3 chr11 60974099 + PGC chr6 41711127 - Exonic hg19 Non-Cancer TCGA-L5-A43C-11A 3 In-Frame Inter-chr q12.2 125615 ChimerSeq FusionScan TCGA RNA-Seq PGA3-PGC PGA3 chr11 60971741 + PGC chr6 41712252 - Exonic hg19 Non-Cancer TCGA-L5-A43C-11A 3 In-Frame Inter-chr q12.2 125616 ChimerSeq FusionScan TCGA RNA-Seq FAM18B1-FAM18B2-CDRT4 FAM18B1 chr17 18707579 + FAM18B2-CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer TCGA-L5-A43C-11A 2 CDS-3'UTR Inter-chr 125617 ChimerSeq FusionScan TCGA RNA-Seq SRP72-STAT5B SRP72 chr4 57357734 + STAT5B chr17 40369482 - Exonic hg19 Non-Cancer TCGA-L5-A43C-11A 2 In-Frame Inter-chr q12 Transcription factor 125618 ChimerSeq FusionScan TCGA RNA-Seq ZNF587B-ZNF154 ZNF587B chr19 58350517 + ZNF154 chr19 58216347 - Exonic hg19 Non-Cancer TCGA-V5-AASX-11A 5 Out-of-Frame Inter-chr Transcription factor q13.43 Transcription factor 125619 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-V5-AASX-11A 4 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125620 ChimerSeq FusionScan TCGA RNA-Seq ZNF417-ZNF587B ZNF417 chr19 58427746 - ZNF587B chr19 58350390 + Exonic hg19 Non-Cancer TCGA-V5-AASX-11A 3 In-Frame Inter-chr Transcription factor q13.43 Transcription factor 125621 ChimerSeq FusionScan TCGA RNA-Seq TMEM63A-ACP2 TMEM63A chr1 226054811 - ACP2 chr11 47267385 - Exonic hg19 Non-Cancer TCGA-V5-AASX-11A 2 Out-of-Frame Inter-chr q42.12 125622 ChimerSeq FusionScan TCGA RNA-Seq TRIM66-EHF TRIM66 chr11 8660200 - EHF chr11 34678454 + Exonic hg19 Non-Cancer TCGA-V5-AASX-11A 2 Out-of-Frame Inter-chr p15.4 Tumor suppressor gene Transcription factor 125623 ChimerSeq FusionScan TCGA RNA-Seq FLII-AGR2 FLII chr17 18149247 - AGR2 chr7 16839441 - Exonic hg19 Non-Cancer TCGA-V5-AASX-11A 2 Out-of-Frame Inter-chr 125624 ChimerSeq FusionScan TCGA RNA-Seq DIP2C-DIP2A-IT1 DIP2C chr10 735433 - DIP2A-IT1 chr21 47882978 + Exonic hg19 Non-Cancer TCGA-V5-AASX-11A 2 Out-of-Frame Inter-chr p15.3 125625 ChimerSeq FusionScan TCGA RNA-Seq RSU1-USP10 RSU1 chr10 16794537 - USP10 chr16 84792321 + Exonic hg19 Non-Cancer TCGA-V5-AASX-11A 2 In-Frame Inter-chr p13 125626 ChimerSeq FusionScan TCGA RNA-Seq TGM6-GRIK3 TGM6 chr20 2398219 + GRIK3 chr1 37282878 - Exonic hg19 Non-Cancer TCGA-IC-A6RF-11A 5 In-Frame Inter-chr p13 125627 ChimerSeq FusionScan TCGA RNA-Seq TGM6-GRIK1 TGM6 chr20 2398219 + GRIK1 chr21 30949501 - Exonic hg19 Non-Cancer TCGA-IC-A6RF-11A 4 In-Frame Inter-chr p13 125628 ChimerSeq FusionScan TCGA RNA-Seq NCOR2-UBC NCOR2 chr12 125051853 - UBC chr12 125398320 - Exonic hg19 Non-Cancer TCGA-IC-A6RF-11A 3 5'UTR-5'UTR Inter-chr q24.31 125629 ChimerSeq FusionScan TCGA RNA-Seq VPS13B-STK3 VPS13B chr8 100712160 + STK3 chr8 99560389 - Exonic hg19 Non-Cancer TCGA-IC-A6RF-11A 2 Out-of-Frame Inter-chr q22.2 125630 ChimerSeq FusionScan TCGA RNA-Seq FBXL19-ORAI2 FBXL19 chr16 30958269 + ORAI2 chr7 102086959 + Exonic hg19 Non-Cancer TCGA-IC-A6RF-11A 2 Out-of-Frame Inter-chr Transcription factor p11.2 125631 ChimerSeq FusionScan TCGA RNA-Seq LHX6-NDUFA8 LHX6 chr9 124975884 - NDUFA8 chr9 124914687 - Exonic hg19 Non-Cancer TCGA-IC-A6RF-11A 2 Out-of-Frame Inter-chr Tumor suppressor gene Transcription factor q33.2 125632 ChimerSeq FusionScan TCGA RNA-Seq PGC-PGA3 PGC chr6 41705467 - PGA3 chr11 60980024 + Exonic hg19 Non-Cancer TCGA-L5-A4OJ-11A 3 In-Frame Inter-chr p21.1 125633 ChimerSeq FusionScan TCGA RNA-Seq PGA3-CTSE PGA3 chr11 60978907 + CTSE chr1 206331020 + Exonic hg19 Non-Cancer TCGA-L5-A4OJ-11A 2 In-Frame Inter-chr q12.2 125634 ChimerSeq FusionScan TCGA RNA-Seq AKR7L-RBM6 AKR7L chr1 19595065 - RBM6 chr3 50085677 + Exonic hg19 Non-Cancer TCGA-L5-A4OJ-11A 2 3'UTR-CDS Inter-chr p36.13 Tumor suppressor gene 125635 ChimerSeq FusionScan TCGA RNA-Seq INPP5A-DDX5 INPP5A chr10 134351675 + DDX5 chr17 62500960 - Exonic hg19 Non-Cancer TCGA-L5-A4OJ-11A 2 Out-of-Frame Inter-chr q26.3 125636 ChimerSeq FusionScan TCGA RNA-Seq FAM18B1-FAM18B2-CDRT4 FAM18B1 chr17 18707579 + FAM18B2-CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer TCGA-L5-A4OJ-11A 2 CDS-3'UTR Inter-chr 125637 ChimerSeq FusionScan TCGA RNA-Seq NIPBL-RALBP1 NIPBL chr5 36962376 + RALBP1 chr18 9512988 + Exonic hg19 Non-Cancer TCGA-L5-A4OJ-11A 2 CDS-5'UTR Inter-chr p13.2 125638 ChimerSeq FusionScan TCGA RNA-Seq ECHDC2-CCDC57 ECHDC2 chr1 53387224 - CCDC57 chr17 80059742 - Exonic hg19 Non-Cancer TCGA-L5-A4OJ-11A 2 In-Frame Inter-chr p32.3 125639 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-L5-A4OM-11A 11 3'UTR-3'UTR Inter-chr 125640 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-L5-A4OM-11A 5 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125641 ChimerSeq FusionScan TCGA RNA-Seq ACTN4-ACTN1 ACTN4 chr19 39195660 + ACTN1 chr14 69376759 - Exonic hg19 Non-Cancer TCGA-L5-A4OM-11A 2 In-Frame Inter-chr 125642 ChimerSeq FusionScan TCGA RNA-Seq LTBP1-CLIP4 LTBP1 chr2 33526711 + CLIP4 chr2 29375550 + Exonic hg19 Non-Cancer TCGA-L5-A4OM-11A 2 In-Frame Inter-chr p22.3 125643 ChimerSeq FusionScan TCGA RNA-Seq FLNC-FLNB FLNC chr7 128491682 + FLNB chr3 58133932 + Exonic hg19 Non-Cancer TCGA-L5-A4OM-11A 2 In-Frame Inter-chr q32.1 125644 ChimerSeq FusionScan TCGA RNA-Seq KLK13-TMPRSS9 KLK13 chr19 51561794 - TMPRSS9 chr19 2421851 + Exonic hg19 Non-Cancer TCGA-IC-A6RE-11A 2 In-Frame Inter-chr q13.41 125645 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-IC-A6RE-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125646 ChimerSeq FusionScan TCGA RNA-Seq FAM83F-TNRC6B FAM83F chr22 40417967 + TNRC6B chr22 40513058 + Exonic hg19 Non-Cancer TCGA-IC-A6RE-11A 2 CDS-5'UTR Inter-chr q13.1 125647 ChimerSeq FusionScan TCGA RNA-Seq KLK13-CELA1 KLK13 chr19 51561794 - CELA1 chr12 51723617 - Exonic hg19 Non-Cancer TCGA-IC-A6RE-11A 2 In-Frame Inter-chr q13.41 125648 ChimerSeq FusionScan TCGA RNA-Seq MYH11-NDE1 MYH11 chr16 15818017 - NDE1 chr16 15818047 + Exonic hg19 Non-Cancer TCGA-L5-A4OO-11A 7 Out-of-Frame Inter-chr Oncogene 125649 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-L5-A4OO-11A 3 3'UTR-3'UTR Inter-chr 125650 ChimerSeq FusionScan TCGA RNA-Seq CBFB-MKL2 CBFB chr16 67070658 + MKL2 chr16 14304099 + Exonic hg19 Non-Cancer TCGA-L5-A4OO-11A 2 Out-of-Frame Inter-chr q22.1 125651 ChimerSeq FusionScan TCGA RNA-Seq GOPC-ST3GAL6 GOPC chr6 117923166 - ST3GAL6 chr3 98487273 + Exonic hg19 Non-Cancer TCGA-L5-A4OO-11A 2 CDS-5'UTR Inter-chr q22.1 125652 ChimerSeq FusionScan TCGA RNA-Seq HACL1-COLQ HACL1 chr3 15604864 - COLQ chr3 15531144 - Exonic hg19 Non-Cancer TCGA-L5-A4OO-11A 2 Out-of-Frame Inter-chr p25.1 125653 ChimerSeq FusionScan TCGA RNA-Seq GPATCH8-SUPT6H GPATCH8 chr17 42580693 - SUPT6H chr17 27027190 + Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 36 Out-of-Frame Inter-chr q21.31 125654 ChimerSeq FusionScan TCGA RNA-Seq KIAA0100-PITPNC1 KIAA0100 chr17 26951250 - PITPNC1 chr17 65688687 + Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 25 In-Frame Inter-chr q11.2 125655 ChimerSeq FusionScan TCGA RNA-Seq VAPA-GNAL VAPA chr18 9914332 + GNAL chr18 11824916 + Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 22 Out-of-Frame Inter-chr p11.22 125656 ChimerSeq FusionScan TCGA RNA-Seq NOL11-KIF19 NOL11 chr17 65720309 + KIF19 chr17 72324563 + Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 17 Out-of-Frame Inter-chr q24.2 125657 ChimerSeq FusionScan TCGA RNA-Seq RPA2-FCN3 RPA2 chr1 28233438 - FCN3 chr1 27697463 - Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 6 In-Frame Inter-chr p35.3 125658 ChimerSeq FusionScan TCGA RNA-Seq AFG3L2-PIEZO2 AFG3L2 chr18 12337339 - PIEZO2 chr18 10979658 - Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 3 Out-of-Frame Inter-chr p11.21 125659 ChimerSeq FusionScan TCGA RNA-Seq USP32-CDK12 USP32 chr17 58378959 - CDK12 chr17 37646809 + Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 3 Out-of-Frame Inter-chr q23.2 Oncogene 125660 ChimerSeq FusionScan TCGA RNA-Seq ATP6V0E1-CREBRF ATP6V0E1 chr5 172447370 + CREBRF chr5 172507587 + Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 2 3'UTR-5'UTR Inter-chr q35.1 125661 ChimerSeq FusionScan TCGA RNA-Seq GMDS-COTL1 GMDS chr6 1930336 - COTL1 chr16 84600561 - Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 2 In-Frame Inter-chr p25.3 125662 ChimerSeq FusionScan TCGA RNA-Seq MYH11-NDE1 MYH11 chr16 15818017 - NDE1 chr16 15818047 + Exonic hg19 Non-Cancer TCGA-IG-A3I8-11A 19 Out-of-Frame Inter-chr Oncogene 125663 ChimerSeq FusionScan TCGA RNA-Seq MYH11-MYH14 MYH11 chr16 15876241 - MYH14 chr19 50730159 + Exonic hg19 Non-Cancer TCGA-IG-A3I8-11A 7 In-Frame Inter-chr Oncogene 125664 ChimerSeq FusionScan TCGA RNA-Seq FBXL19-ORAI2 FBXL19 chr16 30958269 + ORAI2 chr7 102086959 + Exonic hg19 Non-Cancer TCGA-IG-A3I8-11A 4 Out-of-Frame Inter-chr Transcription factor p11.2 125665 ChimerSeq FusionScan TCGA RNA-Seq ACTN4-ACTN1 ACTN4 chr19 39195660 + ACTN1 chr14 69376759 - Exonic hg19 Non-Cancer TCGA-IG-A3I8-11A 3 In-Frame Inter-chr 125666 ChimerSeq FusionScan TCGA RNA-Seq RRAS2-SCP2 RRAS2 chr11 14303147 - SCP2 chr1 53458929 + Exonic hg19 Non-Cancer TCGA-IG-A3I8-11A 2 Out-of-Frame Inter-chr p15.2 125667 ChimerSeq FusionScan TCGA RNA-Seq SDHA-CDO1 SDHA chr5 228448 + CDO1 chr5 115141159 - Exonic hg19 Non-Cancer TCGA-IG-A3I8-11A 2 Out-of-Frame Inter-chr Oncogene Tumor suppressor gene p15.33 Tumor suppressor gene 125668 ChimerSeq FusionScan TCGA RNA-Seq WLS-DIRAS3 WLS chr1 68603462 - DIRAS3 chr1 68513045 - Exonic hg19 Non-Cancer TCGA-IG-A3I8-11A 2 CDS-5'UTR Inter-chr p31.3 Tumor suppressor gene 125669 ChimerSeq FusionScan TCGA RNA-Seq NCOR2-UBC NCOR2 chr12 125051853 - UBC chr12 125398320 - Exonic hg19 Non-Cancer TCGA-IG-A3I8-11A 2 5'UTR-5'UTR Inter-chr q24.31 125670 ChimerSeq FusionScan TCGA RNA-Seq TYW3-CRYZ TYW3 chr1 75199102 + CRYZ chr1 75199092 - Exonic hg19 Non-Cancer TCGA-IG-A3I8-11A 2 CDS-5'UTR Inter-chr p31.1 125671 ChimerSeq FusionScan TCGA RNA-Seq SATB1-DAAM2 SATB1 chr3 18392804 - DAAM2 chr6 39835285 + Exonic hg19 Non-Cancer TCGA-IG-A3I8-11A 2 Out-of-Frame Inter-chr Transcription factor p24.3 125672 ChimerSeq FusionScan TCGA RNA-Seq RBBP4-RBBP7 RBBP4 chr1 33134733 + RBBP7 chrX 16870998 - Exonic hg19 Non-Cancer TCGA-IG-A3I8-11A 2 In-Frame Inter-chr p35.1 Tumor suppressor gene 125673 ChimerSeq FusionScan TCGA RNA-Seq HEPH-ZC4H2 HEPH chrX 65428088 + ZC4H2 chrX 64141868 - Exonic hg19 Non-Cancer TCGA-IG-A3I8-11A 2 Out-of-Frame Inter-chr q12 125674 ChimerSeq FusionScan TCGA RNA-Seq EIF4E3-FOXP1 EIF4E3 chr3 71739160 - FOXP1 chr3 71542706 - Exonic hg19 Non-Cancer TCGA-IG-A3I8-11A 2 CDS-5'UTR Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor 125675 ChimerSeq FusionScan TCGA RNA-Seq FAM91A2-SEC22B FAM91A2 chr1 149576700 + SEC22B chr1 145103907 + Exonic hg19 Non-Cancer TCGA-IG-A3I8-11A 2 5'UTR-CDS Inter-chr 125676 ChimerSeq FusionScan TCGA RNA-Seq CACNA1G-CACNA1H CACNA1G chr17 48650215 + CACNA1H chr16 1250715 + Exonic hg19 Non-Cancer TCGA-IG-A3I8-11A 2 In-Frame Inter-chr q21.33 125677 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-L5-A4OG-11A 7 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125678 ChimerSeq FusionScan TCGA RNA-Seq PGC-PGA3 PGC chr6 41712134 - PGA3 chr11 60974968 + Exonic hg19 Non-Cancer TCGA-L5-A4OG-11A 3 In-Frame Inter-chr p21.1 125679 ChimerSeq FusionScan TCGA RNA-Seq PGA3-PGC PGA3 chr11 60974099 + PGC chr6 41711127 - Exonic hg19 Non-Cancer TCGA-L5-A4OG-11A 2 In-Frame Inter-chr q12.2 125680 ChimerSeq FusionScan TCGA RNA-Seq FLNC-FLNB FLNC chr7 128491682 + FLNB chr3 58133932 + Exonic hg19 Non-Cancer TCGA-L5-A4OG-11A 2 In-Frame Inter-chr q32.1 125681 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-L5-A4OM-11A 19 3'UTR-3'UTR Inter-chr 125682 ChimerSeq FusionScan TCGA RNA-Seq MAP2K5-SKOR1 MAP2K5 chr15 68065090 + SKOR1 chr15 68118273 + Exonic hg19 Non-Cancer TCGA-L5-A4OM-11A 3 Out-of-Frame Inter-chr STE:STE7 q23 Transcription factor 125683 ChimerSeq FusionScan TCGA RNA-Seq COL1A2-MDN1 COL1A2 chr7 94057197 + MDN1 chr6 90459088 - Exonic hg19 Non-Cancer TCGA-L5-A4OM-11A 3 Out-of-Frame Inter-chr q21.3 125684 ChimerSeq FusionScan TCGA RNA-Seq ACTN4-ACTN1 ACTN4 chr19 39195660 + ACTN1 chr14 69376759 - Exonic hg19 Non-Cancer TCGA-L5-A4OM-11A 2 In-Frame Inter-chr 125685 ChimerSeq FusionScan TCGA RNA-Seq LTBP1-CLIP4 LTBP1 chr2 33526711 + CLIP4 chr2 29375550 + Exonic hg19 Non-Cancer TCGA-L5-A4OM-11A 2 In-Frame Inter-chr p22.3 125686 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-L5-A4OM-11A 2 Out-of-Frame Inter-chr q13.2 125687 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-L5-A4OO-11A 3 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125688 ChimerSeq FusionScan TCGA RNA-Seq MYH11-NDE1 MYH11 chr16 15818017 - NDE1 chr16 15818047 + Exonic hg19 Non-Cancer TCGA-L5-A4OO-11A 3 Out-of-Frame Inter-chr Oncogene 125689 ChimerSeq FusionScan TCGA RNA-Seq CBFB-MKL2 CBFB chr16 67070658 + MKL2 chr16 14304099 + Exonic hg19 Non-Cancer TCGA-L5-A4OO-11A 2 Out-of-Frame Inter-chr q22.1 125690 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-L5-A4OJ-11A 3 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125691 ChimerSeq FusionScan TCGA RNA-Seq PGC-PGA3 PGC chr6 41705467 - PGA3 chr11 60980024 + Exonic hg19 Non-Cancer TCGA-L5-A4OJ-11A 3 In-Frame Inter-chr p21.1 125692 ChimerSeq FusionScan TCGA RNA-Seq ECHDC2-CCDC57 ECHDC2 chr1 53387224 - CCDC57 chr17 80059742 - Exonic hg19 Non-Cancer TCGA-L5-A4OJ-11A 2 In-Frame Inter-chr p32.3 125693 ChimerSeq FusionScan TCGA RNA-Seq PGA3-CTSE PGA3 chr11 60978907 + CTSE chr1 206331020 + Exonic hg19 Non-Cancer TCGA-L5-A4OJ-11A 2 In-Frame Inter-chr q12.2 125694 ChimerSeq FusionScan TCGA RNA-Seq AKR7L-RBM6 AKR7L chr1 19595065 - RBM6 chr3 50085677 + Exonic hg19 Non-Cancer TCGA-L5-A4OJ-11A 2 3'UTR-CDS Inter-chr p36.13 Tumor suppressor gene 125695 ChimerSeq FusionScan TCGA RNA-Seq SAMD13-DNASE2B SAMD13 chr1 84791431 + DNASE2B chr1 84874119 + Exonic hg19 Non-Cancer TCGA-L5-A4OR-11A 4 In-Frame Inter-chr p31.1 125696 ChimerSeq FusionScan TCGA RNA-Seq TMTC4-PGA4 TMTC4 chr13 101322613 - PGA4 chr11 60997390 + Exonic hg19 Non-Cancer TCGA-L5-A4OR-11A 2 Out-of-Frame Inter-chr q32.3 125697 ChimerSeq FusionScan TCGA RNA-Seq FAM20C-MAD1L1 FAM20C chr7 208976 + MAD1L1 chr7 1938026 - Exonic hg19 Non-Cancer TCGA-L5-A4OR-11A 2 Out-of-Frame Inter-chr p22.3 Tumor suppressor gene 125698 ChimerSeq FusionScan TCGA RNA-Seq TBC1D22A-NFIB TBC1D22A chr22 47193517 + NFIB chr9 14155892 - Exonic hg19 Non-Cancer TCGA-L5-A4OR-11A 2 In-Frame Inter-chr q13.31 Transcription factor 125699 ChimerSeq FusionScan TCGA RNA-Seq ANKRD36B-ANKRD36 ANKRD36B chr2 98158373 - ANKRD36 chr2 97852934 + Exonic hg19 Non-Cancer TCGA-L5-A4OF-11A 2 In-Frame Inter-chr q11.2 125700 ChimerSeq FusionScan TCGA RNA-Seq PGA3-PGC PGA3 chr11 60971741 + PGC chr6 41712252 - Exonic hg19 Non-Cancer TCGA-L5-A43C-11A 4 In-Frame Inter-chr q12.2 125701 ChimerSeq FusionScan TCGA RNA-Seq PGA3-PGC PGA3 chr11 60971741 + PGC chr6 41705566 - Exonic hg19 Non-Cancer TCGA-L5-A43C-11A 3 In-Frame Inter-chr q12.2 125702 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-L5-A43C-11A 3 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125703 ChimerSeq FusionScan TCGA RNA-Seq COL1A2-MDN1 COL1A2 chr7 94057197 + MDN1 chr6 90459088 - Exonic hg19 Non-Cancer TCGA-L5-A4OG-11A 3 Out-of-Frame Inter-chr q21.3 125704 ChimerSeq FusionScan TCGA RNA-Seq SSR1-PTPN4 SSR1 chr6 7310149 - PTPN4 chr2 120567412 + Exonic hg19 Non-Cancer TCGA-L5-A4OG-11A 2 CDS-5'UTR Inter-chr p24.3 125705 ChimerSeq FusionScan TCGA RNA-Seq TMTC4-PGA4 TMTC4 chr13 101322613 - PGA4 chr11 60997390 + Exonic hg19 Non-Cancer TCGA-L5-A4OR-11A 2 Out-of-Frame Inter-chr q32.3 125706 ChimerSeq FusionScan TCGA RNA-Seq TBC1D22A-NFIB TBC1D22A chr22 47193517 + NFIB chr9 14155892 - Exonic hg19 Non-Cancer TCGA-L5-A4OR-11A 2 In-Frame Inter-chr q13.31 Transcription factor 125707 ChimerSeq FusionScan TCGA RNA-Seq GPATCH8-SUPT6H GPATCH8 chr17 42580693 - SUPT6H chr17 27027190 + Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 61 Out-of-Frame Inter-chr q21.31 125708 ChimerSeq FusionScan TCGA RNA-Seq KIAA0100-PITPNC1 KIAA0100 chr17 26951250 - PITPNC1 chr17 65688687 + Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 50 In-Frame Inter-chr q11.2 125709 ChimerSeq FusionScan TCGA RNA-Seq VAPA-GNAL VAPA chr18 9914332 + GNAL chr18 11824916 + Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 49 Out-of-Frame Inter-chr p11.22 125710 ChimerSeq FusionScan TCGA RNA-Seq NOL11-KIF19 NOL11 chr17 65720309 + KIF19 chr17 72324563 + Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 33 Out-of-Frame Inter-chr q24.2 125711 ChimerSeq FusionScan TCGA RNA-Seq RPA2-FCN3 RPA2 chr1 28233438 - FCN3 chr1 27697463 - Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 10 In-Frame Inter-chr p35.3 125712 ChimerSeq FusionScan TCGA RNA-Seq AFG3L2-PIEZO2 AFG3L2 chr18 12337339 - PIEZO2 chr18 10979658 - Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 9 Out-of-Frame Inter-chr p11.21 125713 ChimerSeq FusionScan TCGA RNA-Seq VAPA-GNAL VAPA chr18 9914332 + GNAL chr18 11862393 + Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 5 Out-of-Frame Inter-chr p11.22 125714 ChimerSeq FusionScan TCGA RNA-Seq SUMO2-SLC16A5 SUMO2 chr17 73178908 - SLC16A5 chr17 73089683 + Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 5 CDS-5'UTR Inter-chr q25.1 125715 ChimerSeq FusionScan TCGA RNA-Seq ERBB2-JUP ERBB2 chr17 37872192 + JUP chr17 39911684 - Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 4 CDS-3'UTR Inter-chr Oncogene q12 Tumor suppressor gene 125716 ChimerSeq FusionScan TCGA RNA-Seq SSH2-SLC39A11 SSH2 chr17 28256955 - SLC39A11 chr17 70732858 - Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 4 Out-of-Frame Inter-chr q11.2 125717 ChimerSeq FusionScan TCGA RNA-Seq USP32-CDK12 USP32 chr17 58378959 - CDK12 chr17 37646809 + Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 4 Out-of-Frame Inter-chr q23.2 Oncogene 125718 ChimerSeq FusionScan TCGA RNA-Seq TUBD1-HSF5 TUBD1 chr17 57963443 - HSF5 chr17 56499791 - Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 2 Out-of-Frame Inter-chr q23.1 Transcription factor 125719 ChimerSeq FusionScan TCGA RNA-Seq PRR11-RAD51C PRR11 chr17 57233166 + RAD51C chr17 56787219 + Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 2 5'UTR-CDS Inter-chr q22 Tumor suppressor gene 125720 ChimerSeq FusionScan TCGA RNA-Seq COPZ1-TMEM50B COPZ1 chr12 54718965 + TMEM50B chr21 34839429 - Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 2 In-Frame Inter-chr q13.13 125721 ChimerSeq FusionScan TCGA RNA-Seq ATP6V0E1-CREBRF ATP6V0E1 chr5 172447370 + CREBRF chr5 172507587 + Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 2 3'UTR-5'UTR Inter-chr q35.1 125722 ChimerSeq FusionScan TCGA RNA-Seq GMDS-COTL1 GMDS chr6 1930336 - COTL1 chr16 84600561 - Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 2 In-Frame Inter-chr p25.3 125723 ChimerSeq FusionScan TCGA RNA-Seq ZNF417-ZNF587B ZNF417 chr19 58427746 - ZNF587B chr19 58350390 + Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 2 In-Frame Inter-chr Transcription factor q13.43 Transcription factor 125724 ChimerSeq FusionScan TCGA RNA-Seq BPTF-TAOK1 BPTF chr17 65822453 + TAOK1 chr17 27794162 + Exonic hg19 Non-Cancer TCGA-V5-A7RE-11A 2 Out-of-Frame Inter-chr Transcription factor q24.2 125725 ChimerSeq FusionScan TCGA RNA-Seq CACNA1G-CACNA1H CACNA1G chr17 48650215 + CACNA1H chr16 1250715 + Exonic hg19 Non-Cancer TCGA-BT-A20R-11A 2 In-Frame Inter-chr q21.33 125726 ChimerSeq FusionScan TCGA RNA-Seq WRB-SH3BGR WRB chr21 40763762 + SH3BGR chr21 40834300 + Exonic hg19 Non-Cancer TCGA-GD-A3OQ-11A 2 In-Frame Inter-chr q22.2 125727 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-GD-A3OQ-11A 2 Out-of-Frame Inter-chr p15.33 125728 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-K4-A3WV-11A 2 Out-of-Frame Inter-chr p15.33 125729 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-GC-A3BM-11A 2 Out-of-Frame Inter-chr p15.33 125730 ChimerSeq FusionScan TCGA RNA-Seq PAK4-EIF3K PAK4 chr19 39616559 + EIF3K chr19 39110976 + Exonic hg19 Non-Cancer TCGA-BT-A20W-11A 2 5'UTR-CDS Inter-chr STE:STE20 q13.2 125731 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-CU-A0YR-11A 3 Out-of-Frame Inter-chr p15.33 125732 ChimerSeq FusionScan TCGA RNA-Seq TFG-GPR128 TFG chr3 100438902 + GPR128 chr3 100348441 + Exonic hg19 Non-Cancer TCGA-GD-A3OP-11A 2 In-Frame Inter-chr q12.2 125733 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-GD-A2C5-11A 2 Out-of-Frame Inter-chr p15.33 125734 ChimerSeq FusionScan TCGA RNA-Seq FAM118A-ATXN10 FAM118A chr22 45706064 + ATXN10 chr22 46125304 + Exonic hg19 Non-Cancer TCGA-GD-A2C5-11A 2 5'UTR-CDS Inter-chr q13.31 125735 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-H2-A3RI-11A 2 Out-of-Frame Inter-chr p15.33 125736 ChimerSeq FusionScan TCGA RNA-Seq TMEM57-RHCE TMEM57 chr1 25775425 + RHCE chr1 25712335 - Exonic hg19 Non-Cancer TCGA-EL-A3T0-11A 2 Out-of-Frame Inter-chr p36.11 125737 ChimerSeq FusionScan TCGA RNA-Seq FAM18B1-FAM18B2-CDRT4 FAM18B1 chr17 18707579 + FAM18B2-CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer TCGA-EL-A3T0-11A 2 CDS-3'UTR Inter-chr 125738 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-EL-A3ZS-11A 2 Out-of-Frame Inter-chr q13.2 125739 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173036437 - Exonic hg19 Non-Cancer TCGA-EL-A3ZH-11A 2 Out-of-Frame Inter-chr p15.33 125740 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-H2-A2K9-11A 2 3'UTR-3'UTR Inter-chr 125741 ChimerSeq FusionScan TCGA RNA-Seq MT1G-MT3 MT1G chr16 56701877 - MT3 chr16 56624751 + Exonic hg19 Non-Cancer TCGA-EM-A1YC-11A 3 In-Frame Inter-chr Tumor suppressor gene q13 125742 ChimerSeq FusionScan TCGA RNA-Seq TG-PFDN1 TG chr8 134042268 + PFDN1 chr5 139661118 - Exonic hg19 Non-Cancer TCGA-EM-A1YC-11A 2 Out-of-Frame Inter-chr q24.22 125743 ChimerSeq FusionScan TCGA RNA-Seq TG-PSMG4 TG chr8 134042268 + PSMG4 chr6 3263917 + Exonic hg19 Non-Cancer TCGA-EM-A1YC-11A 2 In-Frame Inter-chr q24.22 125744 ChimerSeq FusionScan TCGA RNA-Seq LIMCH1-PIR-FIGF LIMCH1 chr4 41652625 + PIR-FIGF chrX 15408373 - Exonic hg19 Non-Cancer TCGA-EM-A1YC-11A 2 In-Frame Inter-chr p13 125745 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BJ-A2N9-11A 5 3'UTR-3'UTR Inter-chr 125746 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-BJ-A2N9-11A 2 Out-of-Frame Inter-chr p15.33 125747 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-EL-A3GZ-11A 2 Out-of-Frame Inter-chr p15.33 125748 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-BJ-A28X-11A 2 Out-of-Frame Inter-chr p15.33 125749 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BJ-A28X-11A 2 3'UTR-3'UTR Inter-chr 125750 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-KS-A41L-11A 2 Out-of-Frame Inter-chr p15.33 125751 ChimerSeq FusionScan TCGA RNA-Seq ARHGEF18-ZNF418 ARHGEF18 chr19 7512054 + ZNF418 chr19 58433997 - Exonic hg19 Non-Cancer TCGA-BJ-A3PR-11A 2 CDS-3'UTR Inter-chr p13.2 Transcription factor 125752 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-EL-A3ZR-11A 3 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125753 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-EL-A3ZR-11A 2 Out-of-Frame Inter-chr p15.33 125754 ChimerSeq FusionScan TCGA RNA-Seq SAV1-GYPB SAV1 chr14 51131896 - GYPB chr4 144922436 - Exonic hg19 Non-Cancer TCGA-EL-A3ZR-11A 2 In-Frame Inter-chr q22.1 125755 ChimerSeq FusionScan TCGA RNA-Seq ANKHD1-EIF4EBP3-RBM22 ANKHD1-EIF4EBP3 chr5 139862252 + RBM22 chr5 150078193 - Exonic hg19 Non-Cancer TCGA-EM-A1CV-11A 2 CDS-3'UTR Inter-chr q31.3 125756 ChimerSeq FusionScan TCGA RNA-Seq WDR41-ADSL WDR41 chr5 76754886 - ADSL chr22 40750251 + Exonic hg19 Non-Cancer TCGA-EM-A1CV-11A 2 In-Frame Inter-chr q14.1 125757 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-ET-A2N5-11B 2 Out-of-Frame Inter-chr p15.33 125758 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 2 Out-of-Frame Inter-chr p15.33 125759 ChimerSeq FusionScan TCGA RNA-Seq ZFP41-SKP1 ZFP41 chr8 144329312 + SKP1 chr5 133493459 - Exonic hg19 Non-Cancer TCGA-DO-A1JZ-11A 2 5'UTR-CDS Inter-chr Transcription factor q24.3 125760 ChimerSeq FusionScan TCGA RNA-Seq CCDC104-NDRG1 CCDC104 chr2 55750958 + NDRG1 chr8 134276895 - Exonic hg19 Non-Cancer TCGA-DO-A1JZ-11A 2 In-Frame Inter-chr Tumor suppressor gene 125761 ChimerSeq FusionScan TCGA RNA-Seq KIAA2026-TG KIAA2026 chr9 6007194 - TG chr8 134144055 + Exonic hg19 Non-Cancer TCGA-KS-A41I-11A 2 In-Frame Inter-chr p24.1 125762 ChimerSeq FusionScan TCGA RNA-Seq GATC-COX6A1 GATC chr12 120884632 + COX6A1 chr12 120876181 + Exonic hg19 Non-Cancer TCGA-EL-A3ZL-11A 6 Out-of-Frame Inter-chr q24.31 125763 ChimerSeq FusionScan TCGA RNA-Seq TFG-GPR128 TFG chr3 100438902 + GPR128 chr3 100348441 + Exonic hg19 Non-Cancer TCGA-EL-A3ZL-11A 3 In-Frame Inter-chr q12.2 125764 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-EL-A3ZL-11A 2 Out-of-Frame Inter-chr p15.33 125765 ChimerSeq FusionScan TCGA RNA-Seq CACNA1G-CACNA1H CACNA1G chr17 48650215 + CACNA1H chr16 1250715 + Exonic hg19 Non-Cancer TCGA-EM-A1CW-11A 3 In-Frame Inter-chr q21.33 125766 ChimerSeq FusionScan TCGA RNA-Seq RALGAPA2-SDR39U1 RALGAPA2 chr20 20563693 - SDR39U1 chr14 24911658 - Exonic hg19 Non-Cancer TCGA-BJ-A290-11A 2 In-Frame Inter-chr p11.23 125767 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173036437 - Exonic hg19 Non-Cancer TCGA-BJ-A290-11A 2 Out-of-Frame Inter-chr p15.33 125768 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BJ-A3PU-11A 2 3'UTR-3'UTR Inter-chr 125769 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-EL-A3TB-11A 2 Out-of-Frame Inter-chr p15.33 125770 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-EL-A3TB-11A 2 3'UTR-3'UTR Inter-chr 125771 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-E8-A2JQ-11A 4 Out-of-Frame Inter-chr q13.2 125772 ChimerSeq FusionScan TCGA RNA-Seq RMST-WDR72 RMST chr12 97859505 + WDR72 chr15 53815519 - Exonic hg19 Non-Cancer TCGA-E8-A2JQ-11A 2 5'UTR-CDS Inter-chr q23.1 125773 ChimerSeq FusionScan TCGA RNA-Seq MECP2-DNASE1L1 MECP2 chrX 153363060 - DNASE1L1 chrX 153631963 - Exonic hg19 Non-Cancer TCGA-E8-A2JQ-11A 2 In-Frame Inter-chr Transcription factor q28 125774 ChimerSeq FusionScan TCGA RNA-Seq WRB-SH3BGR WRB chr21 40763762 + SH3BGR chr21 40834300 + Exonic hg19 Non-Cancer TCGA-EL-A3N2-11A 2 In-Frame Inter-chr q22.2 125775 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-EL-A3MX-11A 5 Out-of-Frame Inter-chr p15.33 125776 ChimerSeq FusionScan TCGA RNA-Seq WRB-SH3BGR WRB chr21 40763762 + SH3BGR chr21 40834300 + Exonic hg19 Non-Cancer TCGA-EL-A3MX-11A 2 In-Frame Inter-chr q22.2 125777 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-E8-A2JQ-11A 4 Out-of-Frame Inter-chr q13.2 125778 ChimerSeq FusionScan TCGA RNA-Seq MECP2-DNASE1L1 MECP2 chrX 153363060 - DNASE1L1 chrX 153631963 - Exonic hg19 Non-Cancer TCGA-E8-A2JQ-11A 2 In-Frame Inter-chr Transcription factor q28 125779 ChimerSeq FusionScan TCGA RNA-Seq EIF4E3-FOXP1 EIF4E3 chr3 71739160 - FOXP1 chr3 71542706 - Exonic hg19 Non-Cancer TCGA-EL-A3MY-11A 2 CDS-5'UTR Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor 125780 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173036437 - Exonic hg19 Non-Cancer TCGA-EL-A3MY-11A 2 Out-of-Frame Inter-chr p15.33 125781 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-EL-A3ZS-11A 2 Out-of-Frame Inter-chr q13.2 125782 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BJ-A3PU-11A 2 3'UTR-3'UTR Inter-chr 125783 ChimerSeq FusionScan TCGA RNA-Seq CACNA1G-CACNA1H CACNA1G chr17 48650215 + CACNA1H chr16 1250715 + Exonic hg19 Non-Cancer TCGA-EM-A1CW-11A 3 In-Frame Inter-chr q21.33 125784 ChimerSeq FusionScan TCGA RNA-Seq KIAA2026-TG KIAA2026 chr9 6007194 - TG chr8 134144055 + Exonic hg19 Non-Cancer TCGA-KS-A41I-11A 2 In-Frame Inter-chr p24.1 125785 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-EL-A3H2-11A 2 Out-of-Frame Inter-chr p15.33 125786 ChimerSeq FusionScan TCGA RNA-Seq ANKHD1-EIF4EBP3-RBM22 ANKHD1-EIF4EBP3 chr5 139862252 + RBM22 chr5 150078193 - Exonic hg19 Non-Cancer TCGA-EM-A1CV-11A 2 CDS-3'UTR Inter-chr q31.3 125787 ChimerSeq FusionScan TCGA RNA-Seq WDR41-ADSL WDR41 chr5 76754886 - ADSL chr22 40750251 + Exonic hg19 Non-Cancer TCGA-EM-A1CV-11A 2 In-Frame Inter-chr q14.1 125788 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-EL-A3H2-11A 2 Out-of-Frame Inter-chr p15.33 125789 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-KS-A41L-11A 2 Out-of-Frame Inter-chr p15.33 125790 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-EL-A3TB-11A 2 Out-of-Frame Inter-chr p15.33 125791 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-EL-A3TB-11A 2 3'UTR-3'UTR Inter-chr 125792 ChimerSeq FusionScan TCGA RNA-Seq FAM18B1-FAM18B2-CDRT4 FAM18B1 chr17 18707579 + FAM18B2-CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer TCGA-EL-A3T2-11A 3 CDS-3'UTR Inter-chr 125793 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-EL-A3T2-11A 2 Out-of-Frame Inter-chr p15.33 125794 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-EL-A3T2-11A 2 3'UTR-3'UTR Inter-chr 125795 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-BJ-A28X-11A 2 Out-of-Frame Inter-chr p15.33 125796 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BJ-A28X-11A 2 3'UTR-3'UTR Inter-chr 125797 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-EL-A3N3-11A 2 Out-of-Frame Inter-chr p15.33 125798 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-EL-A3N3-11A 2 Out-of-Frame Inter-chr q13.2 125799 ChimerSeq FusionScan TCGA RNA-Seq ZC3HAV1L-RNPC3 ZC3HAV1L chr7 138719288 - RNPC3 chr1 104097655 + Exonic hg19 Non-Cancer TCGA-EM-A1CT-11A 2 CDS-3'UTR Inter-chr q34 125800 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-EM-A1CT-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125801 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-EL-A3H7-11A 4 Out-of-Frame Inter-chr p15.33 125802 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-EL-A3H7-11A 2 Out-of-Frame Inter-chr q13.2 125803 ChimerSeq FusionScan TCGA RNA-Seq TP53BP2-PPP1R13B TP53BP2 chr1 223980090 - PPP1R13B chr14 104202539 - Exonic hg19 Non-Cancer TCGA-EL-A3H7-11A 2 Out-of-Frame Inter-chr Tumor suppressor gene q41 125804 ChimerSeq FusionScan TCGA RNA-Seq ARHGEF18-ZNF418 ARHGEF18 chr19 7512054 + ZNF418 chr19 58433997 - Exonic hg19 Non-Cancer TCGA-BJ-A3PR-11A 2 CDS-3'UTR Inter-chr p13.2 Transcription factor 125805 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-EL-A3GZ-11A 2 Out-of-Frame Inter-chr p15.33 125806 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-50-6595-11A 2 Out-of-Frame Inter-chr q13.2 125807 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-44-2657-11A 2 Out-of-Frame Inter-chr q13.2 125808 ChimerSeq FusionScan TCGA RNA-Seq ZNF586-ZNF587B ZNF586 chr19 58288037 + ZNF587B chr19 58350390 + Exonic hg19 Non-Cancer TCGA-44-2657-11A 2 Out-of-Frame Inter-chr Transcription factor q13.43 Transcription factor 125809 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-55-6986-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125810 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-55-6986-11A 2 Out-of-Frame Inter-chr q13.2 125811 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-91-6829-11A 2 Out-of-Frame Inter-chr q13.2 125812 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-38-4625-11A 2 Out-of-Frame Inter-chr q13.2 125813 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-55-6984-11A 2 Out-of-Frame Inter-chr p15.33 125814 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-44-3396-11A 3 Out-of-Frame Inter-chr q13.2 125815 ChimerSeq FusionScan TCGA RNA-Seq PAPSS1-TBCK PAPSS1 chr4 108552786 - TBCK chr4 106967837 - Exonic hg19 Non-Cancer TCGA-44-3396-11A 2 Out-of-Frame Inter-chr q25 Other:TBCK 125816 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-55-6969-11A 2 3'UTR-3'UTR Inter-chr 125817 ChimerSeq FusionScan TCGA RNA-Seq SAV1-GYPB SAV1 chr14 51131896 - GYPB chr4 144922436 - Exonic hg19 Non-Cancer TCGA-50-5932-11A 2 In-Frame Inter-chr q22.1 125818 ChimerSeq FusionScan TCGA RNA-Seq SAV1-GYPB SAV1 chr14 51131896 - GYPB chr4 144922436 - Exonic hg19 Non-Cancer TCGA-38-4627-11A 2 In-Frame Inter-chr q22.1 125819 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-55-6968-11A 2 Out-of-Frame Inter-chr q13.2 125820 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-50-5933-11A 2 Out-of-Frame Inter-chr q13.2 125821 ChimerSeq FusionScan TCGA RNA-Seq TMCO7-CIRH1A TMCO7 chr16 68964198 + CIRH1A chr16 69202723 + Exonic hg19 Non-Cancer TCGA-55-6972-11A 2 Out-of-Frame Inter-chr 125822 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-49-4490-11A 2 Out-of-Frame Inter-chr p15.33 125823 ChimerSeq FusionScan TCGA RNA-Seq SAV1-GYPB SAV1 chr14 51131896 - GYPB chr4 144922436 - Exonic hg19 Non-Cancer TCGA-50-5930-11A 2 In-Frame Inter-chr q22.1 125824 ChimerSeq FusionScan TCGA RNA-Seq SAV1-GYPB SAV1 chr14 51131896 - GYPB chr4 144922436 - Exonic hg19 Non-Cancer TCGA-50-5935-11A 2 In-Frame Inter-chr q22.1 125825 ChimerSeq FusionScan TCGA RNA-Seq SAV1-GYPB SAV1 chr14 51131896 - GYPB chr4 144922436 - Exonic hg19 Non-Cancer TCGA-44-6146-11A 2 In-Frame Inter-chr q22.1 125826 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-44-6146-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125827 ChimerSeq FusionScan TCGA RNA-Seq SAV1-GYPB SAV1 chr14 51131896 - GYPB chr4 144922436 - Exonic hg19 Non-Cancer TCGA-49-6745-11A 2 In-Frame Inter-chr q22.1 125828 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-55-6985-11A 2 3'UTR-3'UTR Inter-chr 125829 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-44-6777-11A 2 Out-of-Frame Inter-chr q13.2 125830 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-44-2668-11A 2 Out-of-Frame Inter-chr q13.2 125831 ChimerSeq FusionScan TCGA RNA-Seq SAV1-GYPB SAV1 chr14 51131896 - GYPB chr4 144922436 - Exonic hg19 Non-Cancer TCGA-50-5939-11A 2 In-Frame Inter-chr q22.1 125832 ChimerSeq FusionScan TCGA RNA-Seq SAV1-GYPB SAV1 chr14 51131896 - GYPB chr4 144922436 - Exonic hg19 Non-Cancer TCGA-55-6970-11A 2 In-Frame Inter-chr q22.1 125833 ChimerSeq FusionScan TCGA RNA-Seq ZNF664-ZNF664-FAM101A ZNF664 chr12 124472685 + ZNF664-FAM101A chr12 124634140 + Exonic hg19 Non-Cancer TCGA-91-6849-11A 2 5'UTR-CDS Inter-chr Transcription factor q24.31 Transcription factor 125834 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-44-2661-11A 3 Out-of-Frame Inter-chr q13.2 125835 ChimerSeq FusionScan TCGA RNA-Seq SAV1-GYPB SAV1 chr14 51131896 - GYPB chr4 144922436 - Exonic hg19 Non-Cancer TCGA-44-6144-11A 2 In-Frame Inter-chr q22.1 125836 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-44-6144-11A 2 Out-of-Frame Inter-chr q13.2 125837 ChimerSeq FusionScan TCGA RNA-Seq SAV1-GYPB SAV1 chr14 51131896 - GYPB chr4 144922436 - Exonic hg19 Non-Cancer TCGA-49-6761-11A 2 In-Frame Inter-chr q22.1 125838 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-38-4626-11A 3 Out-of-Frame Inter-chr q13.2 125839 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-44-5645-11A 2 Out-of-Frame Inter-chr p15.33 125840 ChimerSeq FusionScan TCGA RNA-Seq SAV1-GYPB SAV1 chr14 51131896 - GYPB chr4 144922436 - Exonic hg19 Non-Cancer TCGA-44-5645-11A 2 In-Frame Inter-chr q22.1 125841 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-44-5645-11A 2 Out-of-Frame Inter-chr q13.2 125842 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-AF-2692-11A 2 Out-of-Frame Inter-chr p15.33 125843 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-AF-2692-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125844 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-AF-2692-11A 2 Out-of-Frame Inter-chr q13.2 125845 ChimerSeq FusionScan TCGA RNA-Seq ITCH-ASIP ITCH chr20 32957276 + ASIP chr20 32848170 + Exonic hg19 Non-Cancer TCGA-AG-3742-11A 7 5'UTR-5'UTR Inter-chr q11.22 125846 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-AG-3742-11A 2 Out-of-Frame Inter-chr p15.33 125847 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-AG-3742-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125848 ChimerSeq FusionScan TCGA RNA-Seq PCTP-STXBP4 PCTP chr17 53828605 + STXBP4 chr17 53108528 + Exonic hg19 Non-Cancer TCGA-AH-6643-11A 2 In-Frame Inter-chr q22 125849 ChimerSeq FusionScan TCGA RNA-Seq LRRFIP2-RAP1B LRRFIP2 chr3 37170553 - RAP1B chr12 69047891 + Exonic hg19 Non-Cancer TCGA-AF-3400-11A 2 In-Frame Inter-chr p22.2 125850 ChimerSeq FusionScan TCGA RNA-Seq LRRFIP2-RAP1A LRRFIP2 chr3 37170553 - RAP1A chr1 112245957 + Exonic hg19 Non-Cancer TCGA-AF-3400-11A 2 In-Frame Inter-chr p22.2 Tumor suppressor gene 125851 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-AF-3400-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125852 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-DD-A1EC-11A 2 Out-of-Frame Inter-chr p15.33 125853 ChimerSeq FusionScan TCGA RNA-Seq ANKRD11-FBXO34 ANKRD11 chr16 89484691 - FBXO34 chr14 55817098 + Exonic hg19 Non-Cancer TCGA-BD-A2L6-11A 2 5'UTR-5'UTR Inter-chr q24.3 125854 ChimerSeq FusionScan TCGA RNA-Seq NR1I3-ZP3 NR1I3 chr1 161207830 - ZP3 chr7 76063354 + Exonic hg19 Non-Cancer TCGA-BD-A2L6-11A 2 In-Frame Inter-chr Transcription factor q23.3 125855 ChimerSeq FusionScan TCGA RNA-Seq RTN4-TMEM66 RTN4 chr2 55209650 - TMEM66 chr8 29927575 - Exonic hg19 Non-Cancer TCGA-BC-A10Z-11A 2 In-Frame Inter-chr Tumor suppressor gene p16.1 125856 ChimerSeq FusionScan TCGA RNA-Seq SLC22A1-PAFAH2 SLC22A1 chr6 160564681 + PAFAH2 chr1 26288574 - Exonic hg19 Non-Cancer TCGA-BC-A10Z-11A 2 Out-of-Frame Inter-chr q25.3 125857 ChimerSeq FusionScan TCGA RNA-Seq PLG-TMPRSS2 PLG chr6 161173292 + TMPRSS2 chr21 42839813 - Exonic hg19 Non-Cancer TCGA-BC-A10Z-11A 2 In-Frame Inter-chr q26 125858 ChimerSeq FusionScan TCGA RNA-Seq TLK2-CRADD TLK2 chr17 60613698 + CRADD chr12 94243745 + Exonic hg19 Non-Cancer TCGA-BC-A10Z-11A 2 Out-of-Frame Inter-chr Other:TLK q23.2 125859 ChimerSeq FusionScan TCGA RNA-Seq IL33-ERP44 IL33 chr9 6241785 + ERP44 chr9 102747351 - Exonic hg19 Non-Cancer TCGA-BC-A10Z-11A 2 Out-of-Frame Inter-chr p24.1 125860 ChimerSeq FusionScan TCGA RNA-Seq LBP-TGIF2-C20ORF24 LBP chr20 36993406 + TGIF2-C20ORF24 chr20 35236117 + Exonic hg19 Non-Cancer TCGA-BC-A10Z-11A 2 CDS-3'UTR Inter-chr q11.23 Transcription factor 125861 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-BC-A10Z-11A 2 Out-of-Frame Inter-chr p15.33 125862 ChimerSeq FusionScan TCGA RNA-Seq TF-FAM192A TF chr3 133467428 + FAM192A chr16 57207781 - Exonic hg19 Non-Cancer TCGA-DD-A114-11A 2 CDS-5'UTR Inter-chr q22.1 125863 ChimerSeq FusionScan TCGA RNA-Seq CSAD-GADL1 CSAD chr12 53555056 - GADL1 chr3 30875426 - Exonic hg19 Non-Cancer TCGA-FV-A3I0-11A 2 Out-of-Frame Inter-chr q13.13 125864 ChimerSeq FusionScan TCGA RNA-Seq EIF2C3-CYP2C8 EIF2C3 chr1 36439112 + CYP2C8 chr10 96827114 - Exonic hg19 Non-Cancer TCGA-DD-A1EJ-11A 2 In-Frame Inter-chr 125865 ChimerSeq FusionScan TCGA RNA-Seq RIPK2-DCDC2 RIPK2 chr8 90770461 + DCDC2 chr6 24205330 - Exonic hg19 Non-Cancer TCGA-FV-A2QR-11A 2 Out-of-Frame Inter-chr TKL:RIPK q21.3 Tumor suppressor gene 125866 ChimerSeq FusionScan TCGA RNA-Seq FLT4-NOC4L FLT4 chr5 180076487 - NOC4L chr12 132635525 + Exonic hg19 Non-Cancer TCGA-BC-A110-11A 2 In-Frame Inter-chr TK:VEGFR Oncogene q35.3 125867 ChimerSeq FusionScan TCGA RNA-Seq AHSG-NUDC AHSG chr3 186336426 + NUDC chr1 27271880 + Exonic hg19 Non-Cancer TCGA-BC-A110-11A 2 In-Frame Inter-chr q27.3 125868 ChimerSeq FusionScan TCGA RNA-Seq DOCK1-HPR DOCK1 chr10 128851079 + HPR chr16 72107790 + Exonic hg19 Non-Cancer TCGA-BC-A110-11A 2 In-Frame Inter-chr q26.2 125869 ChimerSeq FusionScan TCGA RNA-Seq CYP2E1-NEBL CYP2E1 chr10 135341076 + NEBL chr10 21101869 - Exonic hg19 Non-Cancer TCGA-DD-A1EB-11A 2 In-Frame Inter-chr q26.3 125870 ChimerSeq FusionScan TCGA RNA-Seq CSAD-GADL1 CSAD chr12 53555056 - GADL1 chr3 30875426 - Exonic hg19 Non-Cancer TCGA-BC-A10Q-11A 2 Out-of-Frame Inter-chr q13.13 125871 ChimerSeq FusionScan TCGA RNA-Seq CSAD-GADL1 CSAD chr12 53555056 - GADL1 chr3 30875426 - Exonic hg19 Non-Cancer TCGA-DD-A39Z-11A 2 Out-of-Frame Inter-chr q13.13 125872 ChimerSeq FusionScan TCGA RNA-Seq F8-CLIC2 F8 chrX 154114408 - CLIC2 chrX 154528458 - Exonic hg19 Non-Cancer TCGA-X7-A8D6-11A 2 In-Frame Inter-chr q28 125873 ChimerSeq FusionScan TCGA RNA-Seq HACL1-COLQ HACL1 chr3 15604864 - COLQ chr3 15531144 - Exonic hg19 Non-Cancer TCGA-X7-A8D6-11A 2 Out-of-Frame Inter-chr p25.1 125874 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-X7-A8D6-11A 2 Out-of-Frame Inter-chr q13.2 125875 ChimerSeq FusionScan TCGA RNA-Seq IFT74-CAAP1 IFT74 chr9 26990193 + CAAP1 chr9 26861137 - Exonic hg19 Non-Cancer TCGA-CV-7101-11A 2 In-Frame Inter-chr p21.2 125876 ChimerSeq FusionScan TCGA RNA-Seq WHSC1-SLC25A26 WHSC1 chr4 1936989 + SLC25A26 chr3 66413283 + Exonic hg19 Non-Cancer TCGA-CV-7101-11A 2 In-Frame Inter-chr Oncogene 125877 ChimerSeq FusionScan TCGA RNA-Seq RAB35-CDK2AP1 RAB35 chr12 120541629 - CDK2AP1 chr12 123751829 - Exonic hg19 Non-Cancer TCGA-CV-7440-11A 2 Out-of-Frame Inter-chr q24.23 Tumor suppressor gene 125878 ChimerSeq FusionScan TCGA RNA-Seq BAG4-AATF BAG4 chr8 38034657 + AATF chr17 35376303 + Exonic hg19 Non-Cancer TCGA-CV-7416-11A 2 In-Frame Inter-chr p11.23 125879 ChimerSeq FusionScan TCGA RNA-Seq PCYT1A-PLEKHA1 PCYT1A chr3 196014485 - PLEKHA1 chr10 124152696 + Exonic hg19 Non-Cancer TCGA-CV-7416-11A 2 5'UTR-5'UTR Inter-chr q29 125880 ChimerSeq FusionScan TCGA RNA-Seq SETD2-MAP4 SETD2 chr3 47205343 - MAP4 chr3 47969840 - Exonic hg19 Non-Cancer TCGA-CV-6943-11A 2 Out-of-Frame Inter-chr Oncogene Tumor suppressor gene p21.31 125881 ChimerSeq FusionScan TCGA RNA-Seq PSMD13-SQRDL PSMD13 chr11 249057 + SQRDL chr15 45962125 + Exonic hg19 Non-Cancer TCGA-CV-6943-11A 2 In-Frame Inter-chr p15.5 125882 ChimerSeq FusionScan TCGA RNA-Seq FTH1-GPC1 FTH1 chr11 61734783 - GPC1 chr2 241398446 + Exonic hg19 Non-Cancer TCGA-CV-6943-11A 2 Out-of-Frame Inter-chr q12.3 125883 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-H7-A6C4-11A 2 3'UTR-3'UTR Inter-chr 125884 ChimerSeq FusionScan TCGA RNA-Seq ATP6V1A-SKP1 ATP6V1A chr3 113465960 + SKP1 chr5 133509713 - Exonic hg19 Non-Cancer TCGA-CV-7434-11A 2 5'UTR-5'UTR Inter-chr q13.31 125885 ChimerSeq FusionScan TCGA RNA-Seq EPS8-DERA EPS8 chr12 15942094 - DERA chr12 16109869 + Exonic hg19 Non-Cancer TCGA-CV-6934-11A 2 5'UTR-CDS Inter-chr p12.3 125886 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-CV-6938-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125887 ChimerSeq FusionScan TCGA RNA-Seq SETD2-MAP4 SETD2 chr3 47205343 - MAP4 chr3 47969840 - Exonic hg19 Non-Cancer TCGA-CV-6943-11A 2 Out-of-Frame Inter-chr Oncogene Tumor suppressor gene p21.31 125888 ChimerSeq FusionScan TCGA RNA-Seq PSMD13-SQRDL PSMD13 chr11 249057 + SQRDL chr15 45962125 + Exonic hg19 Non-Cancer TCGA-CV-6943-11A 2 In-Frame Inter-chr p15.5 125889 ChimerSeq FusionScan TCGA RNA-Seq FTH1-GPC1 FTH1 chr11 61734783 - GPC1 chr2 241398446 + Exonic hg19 Non-Cancer TCGA-CV-6943-11A 2 Out-of-Frame Inter-chr q12.3 125890 ChimerSeq FusionScan TCGA RNA-Seq HIVEP3-UBR5 HIVEP3 chr1 42041214 - UBR5 chr8 103293747 - Exonic hg19 Non-Cancer TCGA-CV-7423-11A 2 In-Frame Inter-chr Tumor suppressor gene Transcription factor p34.2 Oncogene 125891 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-H7-A6C5-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125892 ChimerSeq FusionScan TCGA RNA-Seq RBBP4-RBBP7 RBBP4 chr1 33134733 + RBBP7 chrX 16867424 - Exonic hg19 Non-Cancer TCGA-CV-6955-11A 2 In-Frame Inter-chr p35.1 Tumor suppressor gene 125893 ChimerSeq FusionScan TCGA RNA-Seq RBM6-RHOA RBM6 chr3 49977658 + RHOA chr3 49405981 - Exonic hg19 Non-Cancer TCGA-CV-6955-11A 2 5'UTR-CDS Inter-chr Tumor suppressor gene p21.31 Oncogene Tumor suppressor gene 125894 ChimerSeq FusionScan TCGA RNA-Seq SGTA-ZBTB7A SGTA chr19 2783230 - ZBTB7A chr19 4055245 - Exonic hg19 Non-Cancer TCGA-CV-6962-11A 2 5'UTR-5'UTR Inter-chr p13.3 Transcription factor 125895 ChimerSeq FusionScan TCGA RNA-Seq HIVEP3-UBR5 HIVEP3 chr1 42041214 - UBR5 chr8 103293747 - Exonic hg19 Non-Cancer TCGA-CV-7423-11A 2 In-Frame Inter-chr Tumor suppressor gene Transcription factor p34.2 Oncogene 125896 ChimerSeq FusionScan TCGA RNA-Seq LCE3E-VEGFA LCE3E chr1 152539213 - VEGFA chr6 43746196 + Exonic hg19 Non-Cancer TCGA-CV-7425-11A 2 5'UTR-CDS Inter-chr q21.3 Tumor suppressor gene 125897 ChimerSeq FusionScan TCGA RNA-Seq HPS4-FAM91A1 HPS4 chr22 26862191 - FAM91A1 chr8 124796709 + Exonic hg19 Non-Cancer TCGA-CV-7425-11A 2 In-Frame Inter-chr q12.1 125898 ChimerSeq FusionScan TCGA RNA-Seq DOCK2-NEK10 DOCK2 chr5 169188629 + NEK10 chr3 27394410 - Exonic hg19 Non-Cancer TCGA-CV-7425-11A 2 CDS-5'UTR Inter-chr q35.1 Other:NEK 125899 ChimerSeq FusionScan TCGA RNA-Seq RAB35-CDK2AP1 RAB35 chr12 120541629 - CDK2AP1 chr12 123751829 - Exonic hg19 Non-Cancer TCGA-CV-7440-11A 2 Out-of-Frame Inter-chr q24.23 Tumor suppressor gene 125900 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-CV-7255-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125901 ChimerSeq FusionScan TCGA RNA-Seq SERINC2-IRF2BP2 SERINC2 chr1 31902385 + IRF2BP2 chr1 234743598 - Exonic hg19 Non-Cancer TCGA-CV-7255-11A 2 Out-of-Frame Inter-chr p35.2 125902 ChimerSeq FusionScan TCGA RNA-Seq ATP6V1A-SKP1 ATP6V1A chr3 113465960 + SKP1 chr5 133509713 - Exonic hg19 Non-Cancer TCGA-CV-7434-11A 2 5'UTR-5'UTR Inter-chr q13.31 125903 ChimerSeq FusionScan TCGA RNA-Seq RUSC2-C11orf73 RUSC2 chr9 35490169 + C11orf73 chr11 86048420 + Exonic hg19 Non-Cancer TCGA-CV-6959-11A 2 5'UTR-5'UTR Inter-chr p13.3 125904 ChimerSeq FusionScan TCGA RNA-Seq CHD2-CHMP1A CHD2 chr15 93444529 + CHMP1A chr16 89713739 - Exonic hg19 Non-Cancer TCGA-CV-6959-11A 2 Out-of-Frame Inter-chr q26.1 125905 ChimerSeq FusionScan TCGA RNA-Seq SGTA-ZBTB7A SGTA chr19 2783230 - ZBTB7A chr19 4055245 - Exonic hg19 Non-Cancer TCGA-CV-6962-11A 2 5'UTR-5'UTR Inter-chr p13.3 Transcription factor 125906 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-CV-6933-11A 2 Out-of-Frame Inter-chr p15.33 125907 ChimerSeq FusionScan TCGA RNA-Seq PRH1-PRR4-PRH2 PRH1-PRR4 chr12 11035150 - PRH2 chr12 11083260 + Exonic hg19 Non-Cancer TCGA-CV-6933-11A 2 CDS-5'UTR Inter-chr 125908 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-CV-6933-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125909 ChimerSeq FusionScan TCGA RNA-Seq STATH-HTN1 STATH chr4 70861742 + HTN1 chr4 70918780 + Exonic hg19 Non-Cancer TCGA-CV-6933-11A 2 5'UTR-5'UTR Inter-chr 125910 ChimerSeq FusionScan TCGA RNA-Seq BAG4-AATF BAG4 chr8 38034657 + AATF chr17 35376303 + Exonic hg19 Non-Cancer TCGA-CV-7416-11A 2 In-Frame Inter-chr p11.23 125911 ChimerSeq FusionScan TCGA RNA-Seq PCYT1A-PLEKHA1 PCYT1A chr3 196014485 - PLEKHA1 chr10 124152696 + Exonic hg19 Non-Cancer TCGA-CV-7416-11A 2 5'UTR-5'UTR Inter-chr q29 125912 ChimerSeq FusionScan TCGA RNA-Seq RBM6-RHOA RBM6 chr3 49977658 + RHOA chr3 49405981 - Exonic hg19 Non-Cancer TCGA-CV-6955-11A 2 5'UTR-CDS Inter-chr Tumor suppressor gene p21.31 Oncogene Tumor suppressor gene 125913 ChimerSeq FusionScan TCGA RNA-Seq RBBP4-RBBP7 RBBP4 chr1 33134733 + RBBP7 chrX 16867424 - Exonic hg19 Non-Cancer TCGA-CV-6955-11A 2 In-Frame Inter-chr p35.1 Tumor suppressor gene 125914 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-CV-7235-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125915 ChimerSeq FusionScan TCGA RNA-Seq BGN-NADSYN1 BGN chrX 152760571 + NADSYN1 chr11 71208528 + Exonic hg19 Non-Cancer TCGA-CV-7432-11A 2 5'UTR-CDS Inter-chr q28 125916 ChimerSeq FusionScan TCGA RNA-Seq TMEM87A-SON TMEM87A chr15 42553155 - SON chr21 34931535 + Exonic hg19 Non-Cancer TCGA-CV-7178-11A 2 In-Frame Inter-chr q15.1 Transcription factor 125917 ChimerSeq FusionScan TCGA RNA-Seq OAS3-MIER3 OAS3 chr12 113376512 + MIER3 chr5 56246479 - Exonic hg19 Non-Cancer TCGA-CV-7424-11A 2 In-Frame Inter-chr q24.13 125918 ChimerSeq FusionScan TCGA RNA-Seq ABCA5-PPM1B ABCA5 chr17 67323192 - PPM1B chr2 44436348 + Exonic hg19 Non-Cancer TCGA-CV-7424-11A 2 5'UTR-5'UTR Inter-chr q24.3 125919 ChimerSeq FusionScan TCGA RNA-Seq NVL-NFYC NVL chr1 224473727 - NFYC chr1 41223792 + Exonic hg19 Non-Cancer TCGA-CV-7437-11A 3 In-Frame Inter-chr q42.11 Transcription factor 125920 ChimerSeq FusionScan TCGA RNA-Seq AKAP11-FAM120A AKAP11 chr13 42882745 + FAM120A chr9 96305503 + Exonic hg19 Non-Cancer TCGA-CV-7437-11A 2 Out-of-Frame Inter-chr q14.11 125921 ChimerSeq FusionScan TCGA RNA-Seq TMEM87A-SON TMEM87A chr15 42553155 - SON chr21 34931535 + Exonic hg19 Non-Cancer TCGA-CV-7178-11A 2 In-Frame Inter-chr q15.1 Transcription factor 125922 ChimerSeq FusionScan TCGA RNA-Seq SACM1L-PKD1L2 SACM1L chr3 45730989 + PKD1L2 chr16 81145978 - Exonic hg19 Non-Cancer TCGA-CV-7177-11A 3 In-Frame Inter-chr p21.31 125923 ChimerSeq FusionScan TCGA RNA-Seq SPINK5-NCOA3 SPINK5 chr5 147506642 + NCOA3 chr20 46277748 + Exonic hg19 Non-Cancer TCGA-CV-7177-11A 2 In-Frame Inter-chr q32 Transcription factor 125924 ChimerSeq FusionScan TCGA RNA-Seq EPS8-DERA EPS8 chr12 15942094 - DERA chr12 16109869 + Exonic hg19 Non-Cancer TCGA-CV-6934-11A 2 5'UTR-CDS Inter-chr p12.3 125925 ChimerSeq FusionScan TCGA RNA-Seq MTMR3-UBE2D3 MTMR3 chr22 30279348 + UBE2D3 chr4 103731012 - Exonic hg19 Non-Cancer TCGA-CV-7245-11A 2 5'UTR-CDS Inter-chr q12.2 125926 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-CV-7245-11A 2 3'UTR-3'UTR Inter-chr 125927 ChimerSeq FusionScan TCGA RNA-Seq SPINK5-NCOA3 SPINK5 chr5 147506642 + NCOA3 chr20 46277748 + Exonic hg19 Non-Cancer TCGA-CV-7177-11A 2 In-Frame Inter-chr q32 Transcription factor 125928 ChimerSeq FusionScan TCGA RNA-Seq SACM1L-PKD1L2 SACM1L chr3 45730989 + PKD1L2 chr16 81145978 - Exonic hg19 Non-Cancer TCGA-CV-7177-11A 2 In-Frame Inter-chr p21.31 125929 ChimerSeq FusionScan TCGA RNA-Seq NGRN-C15orf38 NGRN chr15 90809630 + C15orf38 chr15 90454051 - Exonic hg19 Non-Cancer TCGA-K1-A3PO-11A 2 In-Frame Inter-chr q26.1 125930 ChimerSeq FusionScan TCGA RNA-Seq PNPLA7-C9orf3 PNPLA7 chr9 140414368 - C9orf3 chr9 97848963 + Exonic hg19 Non-Cancer TCGA-K1-A3PO-11A 2 CDS-3'UTR Inter-chr q34.3 125931 ChimerSeq FusionScan TCGA RNA-Seq HACL1-COLQ HACL1 chr3 15604864 - COLQ chr3 15531144 - Exonic hg19 Non-Cancer TCGA-FX-A2QS-11A 2 Out-of-Frame Inter-chr p25.1 125932 ChimerSeq FusionScan TCGA RNA-Seq WRB-SH3BGR WRB chr21 40763762 + SH3BGR chr21 40834300 + Exonic hg19 Non-Cancer TCGA-06-0680-11A 2 In-Frame Inter-chr q22.2 125933 ChimerSeq FusionScan TCGA RNA-Seq ZNF664-ZNF664-FAM101A ZNF664 chr12 124472685 + ZNF664-FAM101A chr12 124634140 + Exonic hg19 Non-Cancer TCGA-06-0678-11A 2 5'UTR-CDS Inter-chr Transcription factor q24.31 Transcription factor 125934 ChimerSeq FusionScan TCGA RNA-Seq WRB-SH3BGR WRB chr21 40763762 + SH3BGR chr21 40834300 + Exonic hg19 Non-Cancer TCGA-06-AABW-11A 2 In-Frame Inter-chr q22.2 125935 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-H6-A45N-11A 3 Out-of-Frame Inter-chr q13.2 125936 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-H6-8124-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125937 ChimerSeq FusionScan TCGA RNA-Seq CTRL-CTRB1 CTRL chr16 67965000 - CTRB1 chr16 75252883 + Exonic hg19 Non-Cancer TCGA-HV-A5A3-11A 5 CDS-5'UTR Inter-chr q22.1 125938 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-33-4587-11A 3 Out-of-Frame Inter-chr p15.33 125939 ChimerSeq FusionScan TCGA RNA-Seq DYSF-PDS5B DYSF chr2 71840540 + PDS5B chr13 33306237 + Exonic hg19 Non-Cancer TCGA-33-4587-11A 2 Out-of-Frame Inter-chr p13.2 Tumor suppressor gene 125940 ChimerSeq FusionScan TCGA RNA-Seq KPNA1-PHC3 KPNA1 chr3 122215283 - PHC3 chr3 169847340 - Exonic hg19 Non-Cancer TCGA-33-4587-11A 2 Out-of-Frame Inter-chr q21.1 Tumor suppressor gene 125941 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-22-5478-11A 4 Out-of-Frame Inter-chr q13.2 125942 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-22-5478-11A 2 Out-of-Frame Inter-chr p15.33 125943 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-56-7731-11A 2 Out-of-Frame Inter-chr q13.2 125944 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-22-5483-11A 3 Out-of-Frame Inter-chr q13.2 125945 ChimerSeq FusionScan TCGA RNA-Seq SAV1-GYPB SAV1 chr14 51131896 - GYPB chr4 144922436 - Exonic hg19 Non-Cancer TCGA-22-5483-11A 2 In-Frame Inter-chr q22.1 125946 ChimerSeq FusionScan TCGA RNA-Seq SAV1-GYPB SAV1 chr14 51131896 - GYPB chr4 144922436 - Exonic hg19 Non-Cancer TCGA-77-7142-11A 2 In-Frame Inter-chr q22.1 125947 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-22-5491-11A 3 Out-of-Frame Inter-chr p15.33 125948 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-77-7138-11A 3 Out-of-Frame Inter-chr p15.33 125949 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-77-7138-11A 3 Out-of-Frame Inter-chr q13.2 125950 ChimerSeq FusionScan TCGA RNA-Seq CSAD-GADL1 CSAD chr12 53555056 - GADL1 chr3 30875426 - Exonic hg19 Non-Cancer TCGA-77-8008-11A 2 Out-of-Frame Inter-chr q13.13 125951 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-77-8008-11A 2 Out-of-Frame Inter-chr p15.33 125952 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-77-8008-11A 2 Out-of-Frame Inter-chr q13.2 125953 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173036437 - Exonic hg19 Non-Cancer TCGA-77-8008-11A 2 Out-of-Frame Inter-chr p15.33 125954 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-22-5481-11A 3 Out-of-Frame Inter-chr p15.33 125955 ChimerSeq FusionScan TCGA RNA-Seq GAS5-IL4R GAS5 chr1 173833394 - IL4R chr16 27357787 + Exonic hg19 Non-Cancer TCGA-22-5481-11A 2 3'UTR-CDS Inter-chr Tumor suppressor gene q25.1 125956 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-22-5481-11A 2 Out-of-Frame Inter-chr q13.2 125957 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-22-4609-11A 2 Out-of-Frame Inter-chr q13.2 125958 ChimerSeq FusionScan TCGA RNA-Seq SNAP91-PICALM SNAP91 chr6 84417516 - PICALM chr11 85726006 - Exonic hg19 Non-Cancer TCGA-56-7222-11A 3 Out-of-Frame Inter-chr q14.2 125959 ChimerSeq FusionScan TCGA RNA-Seq IRF1-PCDHA8 IRF1 chr5 131822248 - PCDHA8 chr5 140389211 + Exonic hg19 Non-Cancer TCGA-56-7222-11A 2 In-Frame Inter-chr Tumor suppressor gene Transcription factor q31.1 125960 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-51-4080-11A 3 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125961 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-51-4080-11A 3 Out-of-Frame Inter-chr q13.2 125962 ChimerSeq FusionScan TCGA RNA-Seq HCP5-HLA-G HCP5 chr6 31431056 + HLA-G chr6 29795823 + Exonic hg19 Non-Cancer TCGA-51-4080-11A 2 Out-of-Frame Inter-chr p21.33 125963 ChimerSeq FusionScan TCGA RNA-Seq HCP5-HLA-A HCP5 chr6 31431056 + HLA-A chr6 29910533 + Exonic hg19 Non-Cancer TCGA-51-4080-11A 2 Out-of-Frame Inter-chr p21.33 125964 ChimerSeq FusionScan TCGA RNA-Seq COL15A1-AGTPBP1 COL15A1 chr9 101788248 + AGTPBP1 chr9 88162201 - Exonic hg19 Non-Cancer TCGA-51-4080-11A 2 Out-of-Frame Inter-chr q22.33 125965 ChimerSeq FusionScan TCGA RNA-Seq ZNF682-KIAA1598 ZNF682 chr19 20133812 - KIAA1598 chr10 118738819 - Exonic hg19 Non-Cancer TCGA-90-7767-11A 2 In-Frame Inter-chr Transcription factor p12 125966 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-90-7767-11A 2 Out-of-Frame Inter-chr q13.2 125967 ChimerSeq FusionScan TCGA RNA-Seq A4GALT-CYB5R3 A4GALT chr22 43116802 - CYB5R3 chr22 43032852 - Exonic hg19 Non-Cancer TCGA-90-7767-11A 2 5'UTR-5'UTR Inter-chr q13.2 125968 ChimerSeq FusionScan TCGA RNA-Seq ABLIM1-FANK1 ABLIM1 chr10 116198934 - FANK1 chr10 127696975 + Exonic hg19 Non-Cancer TCGA-56-7579-11A 2 In-Frame Inter-chr q25.3 125969 ChimerSeq FusionScan TCGA RNA-Seq PPP3CA-SLC39A8 PPP3CA chr4 102014932 - SLC39A8 chr4 103184350 - Exonic hg19 Non-Cancer TCGA-56-8201-11A 2 Out-of-Frame Inter-chr q24 125970 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-43-7658-11A 3 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125971 ChimerSeq FusionScan TCGA RNA-Seq SAV1-GYPB SAV1 chr14 51131896 - GYPB chr4 144922436 - Exonic hg19 Non-Cancer TCGA-43-7658-11A 3 In-Frame Inter-chr q22.1 125972 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-43-7658-11A 2 Out-of-Frame Inter-chr q13.2 125973 ChimerSeq FusionScan TCGA RNA-Seq HGSNAT-PRKCI HGSNAT chr8 43002206 + PRKCI chr3 170020827 + Exonic hg19 Non-Cancer TCGA-43-7658-11A 2 Out-of-Frame Inter-chr p11.21 125974 ChimerSeq FusionScan TCGA RNA-Seq MYO1F-ZNF585A MYO1F chr19 8642190 - ZNF585A chr19 37660956 - Exonic hg19 Non-Cancer TCGA-43-7658-11A 2 CDS-5'UTR Inter-chr p13.2 Transcription factor 125975 ChimerSeq FusionScan TCGA RNA-Seq WWC2-APBB2 WWC2 chr4 184020775 + APBB2 chr4 41102767 - Exonic hg19 Non-Cancer TCGA-43-7658-11A 2 CDS-5'UTR Inter-chr q35.1 125976 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-22-4593-11A 2 Out-of-Frame Inter-chr q13.2 125977 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-56-7582-11A 2 Out-of-Frame Inter-chr q13.2 125978 ChimerSeq FusionScan TCGA RNA-Seq CHMP3-NBAS CHMP3 chr2 86790426 - NBAS chr2 15359092 - Exonic hg19 Non-Cancer TCGA-77-7338-11A 2 Out-of-Frame Inter-chr p11.2 125979 ChimerSeq FusionScan TCGA RNA-Seq FBXL19-ORAI2 FBXL19 chr16 30958269 + ORAI2 chr7 102086959 + Exonic hg19 Non-Cancer TCGA-77-7338-11A 2 Out-of-Frame Inter-chr Transcription factor p11.2 125980 ChimerSeq FusionScan TCGA RNA-Seq ZCCHC7-UBE2R2 ZCCHC7 chr9 37126939 + UBE2R2 chr9 33917015 + Exonic hg19 Non-Cancer TCGA-77-7338-11A 2 Out-of-Frame Inter-chr p13.2 125981 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-43-3394-11A 6 Out-of-Frame Inter-chr q13.2 125982 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-43-3394-11A 2 Out-of-Frame Inter-chr p15.33 125983 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-43-3394-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125984 ChimerSeq FusionScan TCGA RNA-Seq SAR1B-PARL SAR1B chr5 133956622 - PARL chr3 183551613 - Exonic hg19 Non-Cancer TCGA-43-3394-11A 2 Out-of-Frame Inter-chr q31.1 125985 ChimerSeq FusionScan TCGA RNA-Seq ZNF586-ZNF587B ZNF586 chr19 58288037 + ZNF587B chr19 58350390 + Exonic hg19 Non-Cancer TCGA-43-3394-11A 2 Out-of-Frame Inter-chr Transcription factor q13.43 Transcription factor 125986 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-22-5482-11A 3 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125987 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-22-5482-11A 2 Out-of-Frame Inter-chr q13.2 125988 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-22-5482-11A 2 3'UTR-3'UTR Inter-chr 125989 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-56-7580-11A 2 Out-of-Frame Inter-chr q13.2 125990 ChimerSeq FusionScan TCGA RNA-Seq SAV1-GYPB SAV1 chr14 51131896 - GYPB chr4 144922436 - Exonic hg19 Non-Cancer TCGA-51-4079-11A 4 In-Frame Inter-chr q22.1 125991 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-51-4079-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125992 ChimerSeq FusionScan TCGA RNA-Seq HCP5-HLA-A HCP5 chr6 31431056 + HLA-A chr6 29910533 + Exonic hg19 Non-Cancer TCGA-51-4079-11A 2 Out-of-Frame Inter-chr p21.33 125993 ChimerSeq FusionScan TCGA RNA-Seq LARP4-ADK LARP4 chr12 50848200 + ADK chr10 76285013 + Exonic hg19 Non-Cancer TCGA-51-4079-11A 2 Out-of-Frame Inter-chr q13.12 125994 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-77-7337-11A 2 Out-of-Frame Inter-chr p15.33 125995 ChimerSeq FusionScan TCGA RNA-Seq SAV1-GYPB SAV1 chr14 51131896 - GYPB chr4 144922436 - Exonic hg19 Non-Cancer TCGA-77-7337-11A 2 In-Frame Inter-chr q22.1 125996 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-77-7337-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125997 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-43-7657-11A 2 Out-of-Frame Inter-chr p15.33 125998 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-43-7657-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 125999 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-43-5670-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126000 ChimerSeq FusionScan TCGA RNA-Seq ERN1-PLEKHB2 ERN1 chr17 62157021 - PLEKHB2 chr2 131878506 + Exonic hg19 Non-Cancer TCGA-43-5670-11A 2 CDS-5'UTR Inter-chr q23.3 126001 ChimerSeq FusionScan TCGA RNA-Seq MAGI1-DAPK2 MAGI1 chr3 66023670 - DAPK2 chr15 64222654 - Exonic hg19 Non-Cancer TCGA-43-5670-11A 2 In-Frame Inter-chr Oncogene CAMK:DAPK Tumor suppressor gene 126002 ChimerSeq FusionScan TCGA RNA-Seq ZFAND4-VSTM4 ZFAND4 chr10 46158989 - VSTM4 chr10 50227820 - Exonic hg19 Non-Cancer TCGA-43-5670-11A 2 Out-of-Frame Inter-chr q11.22 126003 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-22-5471-11A 2 Out-of-Frame Inter-chr p15.33 126004 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-60-2709-11A 2 Out-of-Frame Inter-chr q13.2 126005 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-90-6837-11A 3 Out-of-Frame Inter-chr q13.2 126006 ChimerSeq FusionScan TCGA RNA-Seq INTS4L1-KSR1 INTS4L1 chr7 64601786 + KSR1 chr17 25877593 + Exonic hg19 Non-Cancer TCGA-90-6837-11A 2 5'UTR-5'UTR Inter-chr TKL:RAF 126007 ChimerSeq FusionScan TCGA RNA-Seq CSAD-GADL1 CSAD chr12 53555056 - GADL1 chr3 30875426 - Exonic hg19 Non-Cancer TCGA-51-4081-11A 2 Out-of-Frame Inter-chr q13.13 126008 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-22-5489-11A 2 Out-of-Frame Inter-chr p15.33 126009 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-22-5489-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126010 ChimerSeq FusionScan TCGA RNA-Seq NFATC3-PLA2G15 NFATC3 chr16 68225678 + PLA2G15 chr16 68283192 + Exonic hg19 Non-Cancer TCGA-22-5489-11A 2 In-Frame Inter-chr Transcription factor q22.1 126011 ChimerSeq FusionScan TCGA RNA-Seq WRB-SH3BGR WRB chr21 40763762 + SH3BGR chr21 40834300 + Exonic hg19 Non-Cancer TCGA-43-6647-11A 2 In-Frame Inter-chr q22.2 126012 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-43-6647-11A 2 Out-of-Frame Inter-chr q13.2 126013 ChimerSeq FusionScan TCGA RNA-Seq GYS1-POLG2 GYS1 chr19 49473802 - POLG2 chr17 62476506 - Exonic hg19 Non-Cancer TCGA-77-8007-11A 2 In-Frame Inter-chr q13.33 126014 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-58-8386-11A 3 Out-of-Frame Inter-chr q13.2 126015 ChimerSeq FusionScan TCGA RNA-Seq ITPKC-FOSL2 ITPKC chr19 41224195 + FOSL2 chr2 28631625 + Exonic hg19 Non-Cancer TCGA-GL-A59R-11A 2 In-Frame Inter-chr q13.2 Transcription factor 126016 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-A4-A4ZT-11A 2 3'UTR-3'UTR Inter-chr 126017 ChimerSeq FusionScan TCGA RNA-Seq FARP1-STK24 FARP1 chr13 98865667 + STK24 chr13 99171727 - Exonic hg19 Non-Cancer TCGA-Y8-A8RY-11A 2 In-Frame Inter-chr q32.2 126018 ChimerSeq FusionScan TCGA RNA-Seq FAM18B1-FAM18B2-CDRT4 FAM18B1 chr17 18707579 + FAM18B2-CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer TCGA-Y8-A8RY-11A 2 CDS-3'UTR Inter-chr 126019 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-BQ-7051-11A 2 Out-of-Frame Inter-chr p15.33 126020 ChimerSeq FusionScan TCGA RNA-Seq INTS4L1-KSR1 INTS4L1 chr7 64601786 + KSR1 chr17 25877593 + Exonic hg19 Non-Cancer TCGA-DZ-6132-11A 2 5'UTR-5'UTR Inter-chr TKL:RAF 126021 ChimerSeq FusionScan TCGA RNA-Seq MGC2752-FLJ43681 MGC2752 chr19 59086955 + FLJ43681 chr17 81187692 + Exonic hg19 Non-Cancer TCGA-DZ-6132-11A 2 5'UTR-5'UTR Inter-chr 126022 ChimerSeq FusionScan TCGA RNA-Seq WRB-SH3BGR WRB chr21 40763762 + SH3BGR chr21 40834300 + Exonic hg19 Non-Cancer TCGA-DZ-6132-11A 2 In-Frame Inter-chr q22.2 126023 ChimerSeq FusionScan TCGA RNA-Seq CYP4A11-CYP4F3 CYP4A11 chr1 47400124 - CYP4F3 chr19 15763632 + Exonic hg19 Non-Cancer TCGA-BQ-5879-11A 2 Out-of-Frame Inter-chr p33 126024 ChimerSeq FusionScan TCGA RNA-Seq PCK2-PCK1 PCK2 chr14 24568445 + PCK1 chr20 56138620 + Exonic hg19 Non-Cancer TCGA-BQ-5879-11A 2 In-Frame Inter-chr q11.2 126025 ChimerSeq FusionScan TCGA RNA-Seq NEK6-PSMB7 NEK6 chr9 127076264 + PSMB7 chr9 127119194 - Exonic hg19 Non-Cancer TCGA-BQ-5879-11A 2 In-Frame Inter-chr Other:NEK q33.3 126026 ChimerSeq FusionScan TCGA RNA-Seq MT2A-MT1G MT2A chr16 56642595 + MT1G chr16 56701289 - Exonic hg19 Non-Cancer TCGA-BQ-5890-11A 2 In-Frame Inter-chr Tumor suppressor gene q13 Tumor suppressor gene 126027 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BQ-5887-11A 3 3'UTR-3'UTR Inter-chr 126028 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-BQ-5894-11A 2 Out-of-Frame Inter-chr p15.33 126029 ChimerSeq FusionScan TCGA RNA-Seq MTMR8-SH3BGRL MTMR8 chrX 63615219 - SH3BGRL chrX 80532482 + Exonic hg19 Non-Cancer TCGA-BQ-5894-11A 2 In-Frame Inter-chr q11.2 126030 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173036437 - Exonic hg19 Non-Cancer TCGA-BQ-7061-11A 2 Out-of-Frame Inter-chr p15.33 126031 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-BQ-5878-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126032 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-B9-4115-11A 3 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126033 ChimerSeq FusionScan TCGA RNA-Seq FAM18B1-FAM18B2-CDRT4 FAM18B1 chr17 18707579 + FAM18B2-CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer TCGA-B9-4115-11A 2 CDS-3'UTR Inter-chr 126034 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-GL-A9DE-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126035 ChimerSeq FusionScan TCGA RNA-Seq PCK2-PCK1 PCK2 chr14 24568445 + PCK1 chr20 56138620 + Exonic hg19 Non-Cancer TCGA-BQ-5877-11A 2 In-Frame Inter-chr q11.2 126036 ChimerSeq FusionScan TCGA RNA-Seq UBE4B-ASCC3 UBE4B chr1 10093752 + ASCC3 chr6 101127628 - Exonic hg19 Non-Cancer TCGA-BQ-7046-11A 2 In-Frame Inter-chr Tumor suppressor gene p36.22 126037 ChimerSeq FusionScan TCGA RNA-Seq SCAMP1-AP3B1 SCAMP1 chr5 77656552 + AP3B1 chr5 77563419 - Exonic hg19 Non-Cancer TCGA-BQ-7046-11A 2 Out-of-Frame Inter-chr q14.1 126038 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-AA-3534-11A 2 Out-of-Frame Inter-chr q13.2 126039 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-AZ-6601-11A 2 Out-of-Frame Inter-chr p15.33 126040 ChimerSeq FusionScan TCGA RNA-Seq SYTL4-TSPAN6 SYTL4 chrX 99940986 - TSPAN6 chrX 99890743 - Exonic hg19 Non-Cancer TCGA-AA-3697-11A 2 In-Frame Inter-chr q22.1 126041 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-AA-3697-11A 2 Out-of-Frame Inter-chr p15.33 126042 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-AA-3517-11A 2 Out-of-Frame Inter-chr q13.2 126043 ChimerSeq FusionScan TCGA RNA-Seq TFG-GPR128 TFG chr3 100438902 + GPR128 chr3 100348441 + Exonic hg19 Non-Cancer TCGA-AA-3518-11A 3 In-Frame Inter-chr q12.2 126044 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-AA-3518-11A 2 Out-of-Frame Inter-chr p15.33 126045 ChimerSeq FusionScan TCGA RNA-Seq EIF3E-NDUFS2 EIF3E chr8 109240495 - NDUFS2 chr1 161182140 + Exonic hg19 Non-Cancer TCGA-AA-3663-11A 2 In-Frame Inter-chr q23.1 126046 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-A6-2680-11A 2 Out-of-Frame Inter-chr p15.33 126047 ChimerSeq FusionScan TCGA RNA-Seq TTC28-ANKRD17 TTC28 chr22 29025539 - ANKRD17 chr4 73968264 - Exonic hg19 Non-Cancer TCGA-AZ-6598-11A 2 In-Frame Inter-chr q12.1 126048 ChimerSeq FusionScan TCGA RNA-Seq TFG-GPR128 TFG chr3 100438902 + GPR128 chr3 100348441 + Exonic hg19 Non-Cancer TCGA-AA-3525-11A 2 In-Frame Inter-chr q12.2 126049 ChimerSeq FusionScan TCGA RNA-Seq CDCP1-SSX2IP CDCP1 chr3 45187697 - SSX2IP chr1 85146070 - Exonic hg19 Non-Cancer TCGA-A6-2686-11A 2 CDS-5'UTR Inter-chr Tumor suppressor gene p21.31 126050 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-AA-3713-11A 2 Out-of-Frame Inter-chr p15.33 126051 ChimerSeq FusionScan TCGA RNA-Seq ZC3HAV1L-CHMP1A ZC3HAV1L chr7 138711453 - CHMP1A chr16 89713739 - Exonic hg19 Non-Cancer TCGA-A6-2678-11A 2 In-Frame Inter-chr q34 KB Pub 126052 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A0DT-11A 3 3'UTR-3'UTR Inter-chr 126053 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-BH-A203-11A 2 Out-of-Frame Inter-chr p15.33 126054 ChimerSeq FusionScan TCGA RNA-Seq TRA2B-SET TRA2B chr3 185655612 - SET chr9 131453448 + Exonic hg19 Non-Cancer TCGA-BH-A203-11A 2 Out-of-Frame Inter-chr q27.2 126055 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173036437 - Exonic hg19 Non-Cancer TCGA-E9-A1N6-11A 2 Out-of-Frame Inter-chr p15.33 126056 ChimerSeq FusionScan TCGA RNA-Seq TIAL1-SEC23IP TIAL1 chr10 121355945 - SEC23IP chr10 121685547 + Exonic hg19 Non-Cancer TCGA-BH-A0BJ-11A 2 Out-of-Frame Inter-chr q26.11 126057 ChimerSeq FusionScan TCGA RNA-Seq SNAP91-PICALM SNAP91 chr6 84417516 - PICALM chr11 85726006 - Exonic hg19 Non-Cancer TCGA-BH-A0BJ-11A 2 Out-of-Frame Inter-chr q14.2 126058 ChimerSeq FusionScan TCGA RNA-Seq SPECC1L-TM4SF1 SPECC1L chr22 24765288 + TM4SF1 chr3 149089654 - Exonic hg19 Non-Cancer TCGA-BH-A1FM-11B 2 Out-of-Frame Inter-chr q11.23 126059 ChimerSeq FusionScan TCGA RNA-Seq ITGA9-GOLGA4 ITGA9 chr3 37523098 + GOLGA4 chr3 37340323 + Exonic hg19 Non-Cancer TCGA-E2-A1LS-11A 4 In-Frame Inter-chr Oncogene p22.2 126060 ChimerSeq FusionScan TCGA RNA-Seq F8-CLIC2 F8 chrX 154114408 - CLIC2 chrX 154528458 - Exonic hg19 Non-Cancer TCGA-E2-A1LS-11A 2 In-Frame Inter-chr q28 126061 ChimerSeq FusionScan TCGA RNA-Seq PAK1-THRSP PAK1 chr11 77184596 - THRSP chr11 77778704 + Exonic hg19 Non-Cancer TCGA-E2-A1LS-11A 2 5'UTR-3'UTR Inter-chr STE:STE20 q14.1 126062 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-E2-A1LS-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126063 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-E2-A1LH-11A 2 Out-of-Frame Inter-chr p15.33 126064 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-BH-A0AZ-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126065 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A0AZ-11A 2 3'UTR-3'UTR Inter-chr 126066 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-BH-A0AZ-11A 2 Out-of-Frame Inter-chr p15.33 126067 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-BH-A1EW-11B 3 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126068 ChimerSeq FusionScan TCGA RNA-Seq CPSF6-LYZ CPSF6 chr12 69633486 + LYZ chr12 69743887 + Exonic hg19 Non-Cancer TCGA-BH-A1EW-11B 3 Out-of-Frame Inter-chr q15 126069 ChimerSeq FusionScan TCGA RNA-Seq ITFG1-ZFC3H1 ITFG1 chr16 47252778 - ZFC3H1 chr12 72041593 - Exonic hg19 Non-Cancer TCGA-BH-A1EW-11B 3 In-Frame Inter-chr q12.1 126070 ChimerSeq FusionScan TCGA RNA-Seq PTPN12-TEKT3 PTPN12 chr7 77166962 + TEKT3 chr17 15234931 - Exonic hg19 Non-Cancer TCGA-BH-A1EW-11B 2 CDS-5'UTR Inter-chr Tumor suppressor gene q11.23 126071 ChimerSeq FusionScan TCGA RNA-Seq YEATS4-GRIP1 YEATS4 chr12 69764755 + GRIP1 chr12 66859202 - Exonic hg19 Non-Cancer TCGA-BH-A1EW-11B 2 In-Frame Inter-chr q15 126072 ChimerSeq FusionScan TCGA RNA-Seq ATXN2-FBXW2 ATXN2 chr12 111990083 - FBXW2 chr9 123540823 - Exonic hg19 Non-Cancer TCGA-BH-A1EW-11B 2 In-Frame Inter-chr q24.12 126073 ChimerSeq FusionScan TCGA RNA-Seq PLXNA4-SLAIN2 PLXNA4 chr7 132261180 - SLAIN2 chr4 48422141 + Exonic hg19 Non-Cancer TCGA-BH-A0B8-11A 2 5'UTR-CDS Inter-chr q32.3 126074 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-BH-A0B8-11A 2 Out-of-Frame Inter-chr p15.33 126075 ChimerSeq FusionScan TCGA RNA-Seq SORT1-EIF4A2 SORT1 chr1 109859471 - EIF4A2 chr3 186504915 + Exonic hg19 Non-Cancer TCGA-A7-A0D9-11A 2 In-Frame Inter-chr p13.3 126076 ChimerSeq FusionScan TCGA RNA-Seq NEGR1-DCN NEGR1 chr1 72241854 - DCN chr12 91558494 - Exonic hg19 Non-Cancer TCGA-A7-A0D9-11A 2 In-Frame Inter-chr p31.1 Tumor suppressor gene 126077 ChimerSeq FusionScan TCGA RNA-Seq ATXN3-CD46 ATXN3 chr14 92537278 - CD46 chr1 207943665 + Exonic hg19 Non-Cancer TCGA-A7-A0D9-11A 2 In-Frame Inter-chr q32.12 126078 ChimerSeq FusionScan TCGA RNA-Seq CDC14B-DUSP14 CDC14B chr9 99381500 - DUSP14 chr17 35870778 + Exonic hg19 Non-Cancer TCGA-E2-A15M-11A 2 CDS-5'UTR Inter-chr q22.33 126079 ChimerSeq FusionScan TCGA RNA-Seq ZBTB16-NNMT ZBTB16 chr11 114057760 + NNMT chr11 114168672 + Exonic hg19 Non-Cancer TCGA-BH-A0B5-11A 2 In-Frame Inter-chr Tumor suppressor gene Transcription factor q23.2 126080 ChimerSeq FusionScan TCGA RNA-Seq PHF12-STAT6 PHF12 chr17 27277082 - STAT6 chr12 57492861 - Exonic hg19 Non-Cancer TCGA-BH-A1FG-11B 2 Out-of-Frame Inter-chr q11.2 Transcription factor 126081 ChimerSeq FusionScan TCGA RNA-Seq ZNF37A-SEC23IP ZNF37A chr10 38385560 + SEC23IP chr10 121700097 + Exonic hg19 Non-Cancer TCGA-BH-A1FG-11B 2 CDS-5'UTR Inter-chr Transcription factor p11.1 126082 ChimerSeq FusionScan TCGA RNA-Seq RCC1-DST RCC1 chr1 28832596 + DST chr6 56482216 - Exonic hg19 Non-Cancer TCGA-BH-A1FG-11B 2 5'UTR-CDS Inter-chr p35.3 Oncogene 126083 ChimerSeq FusionScan TCGA RNA-Seq TPD52L2-DNAJC5 TPD52L2 chr20 62505169 + DNAJC5 chr20 62559687 + Exonic hg19 Non-Cancer TCGA-BH-A0AY-11A 3 5'UTR-5'UTR Inter-chr q13.33 126084 ChimerSeq FusionScan TCGA RNA-Seq VPS37B-UBC VPS37B chr12 123380498 - UBC chr12 125398320 - Exonic hg19 Non-Cancer TCGA-BH-A0AY-11A 2 CDS-5'UTR Inter-chr q24.31 126085 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A0AY-11A 2 3'UTR-3'UTR Inter-chr 126086 ChimerSeq FusionScan TCGA RNA-Seq GLUL-ERICH1 GLUL chr1 182360813 - ERICH1 chr8 624047 - Exonic hg19 Non-Cancer TCGA-BH-A0AY-11A 2 5'UTR-CDS Inter-chr q25.3 126087 ChimerSeq FusionScan TCGA RNA-Seq HACL1-COLQ HACL1 chr3 15604864 - COLQ chr3 15531144 - Exonic hg19 Non-Cancer TCGA-BH-A0AY-11A 2 Out-of-Frame Inter-chr p25.1 126088 ChimerSeq FusionScan TCGA RNA-Seq MYO18A-STAT5B MYO18A chr17 27492959 - STAT5B chr17 40384155 - Exonic hg19 Non-Cancer TCGA-BH-A0DD-11A 2 CDS-5'UTR Inter-chr Oncogene q11.2 Transcription factor 126089 ChimerSeq FusionScan TCGA RNA-Seq XBP1-MTERFD1 XBP1 chr22 29196285 - MTERFD1 chr8 97258159 - Exonic hg19 Non-Cancer TCGA-BH-A18N-11A 2 Out-of-Frame Inter-chr Transcription factor q12.1 126090 ChimerSeq FusionScan TCGA RNA-Seq SRM-USP33 SRM chr1 11115837 - USP33 chr1 78167156 - Exonic hg19 Non-Cancer TCGA-E2-A1LB-11A 2 In-Frame Inter-chr TK:Src p36.22 Tumor suppressor gene 126091 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-BH-A0E0-11A 2 Out-of-Frame Inter-chr p15.33 126092 ChimerSeq FusionScan TCGA RNA-Seq INTS4L1-KSR1 INTS4L1 chr7 64601786 + KSR1 chr17 25877593 + Exonic hg19 Non-Cancer TCGA-BH-A0BZ-11A 2 5'UTR-5'UTR Inter-chr TKL:RAF 126093 ChimerSeq FusionScan TCGA RNA-Seq RNF214-SAA1 RNF214 chr11 117105095 + SAA1 chr11 18290741 + Exonic hg19 Non-Cancer TCGA-BH-A0BZ-11A 2 Out-of-Frame Inter-chr q23.3 Tumor suppressor gene 126094 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-BH-A0H5-11A 2 Out-of-Frame Inter-chr p15.33 126095 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A0H5-11A 2 3'UTR-3'UTR Inter-chr 126096 ChimerSeq FusionScan TCGA RNA-Seq DNAJC25-GNG10-UGCG DNAJC25-GNG10 chr9 114429226 + UGCG chr9 114676884 + Exonic hg19 Non-Cancer TCGA-BH-A1F2-11A 2 Out-of-Frame Inter-chr q31.3 126097 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A1F2-11A 2 3'UTR-3'UTR Inter-chr 126098 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-E9-A1N4-11A 4 3'UTR-3'UTR Inter-chr 126099 ChimerSeq FusionScan TCGA RNA-Seq HACL1-COLQ HACL1 chr3 15604864 - COLQ chr3 15531144 - Exonic hg19 Non-Cancer TCGA-E9-A1N4-11A 2 Out-of-Frame Inter-chr p25.1 126100 ChimerSeq FusionScan TCGA RNA-Seq FAM120A-ECM2 FAM120A chr9 96214671 + ECM2 chr9 95272316 - Exonic hg19 Non-Cancer TCGA-E9-A1R7-11A 2 In-Frame Inter-chr q22.31 126101 ChimerSeq FusionScan TCGA RNA-Seq WRB-SH3BGR WRB chr21 40763762 + SH3BGR chr21 40834300 + Exonic hg19 Non-Cancer TCGA-E9-A1R7-11A 2 In-Frame Inter-chr q22.2 126102 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-E9-A1R7-11A 2 Out-of-Frame Inter-chr p15.33 126103 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-BH-A1EN-11A 2 Out-of-Frame Inter-chr p15.33 126104 ChimerSeq FusionScan TCGA RNA-Seq SAV1-GYPB SAV1 chr14 51131896 - GYPB chr4 144922436 - Exonic hg19 Non-Cancer TCGA-BH-A1EN-11A 2 In-Frame Inter-chr q22.1 126105 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-BH-A0B3-11B 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126106 ChimerSeq FusionScan TCGA RNA-Seq SQRDL-B2M SQRDL chr15 45927306 + B2M chr15 45007620 + Exonic hg19 Non-Cancer TCGA-BH-A0B3-11B 2 5'UTR-CDS Inter-chr Oncogene 126107 ChimerSeq FusionScan TCGA RNA-Seq ZNF586-ZNF587B ZNF586 chr19 58288037 + ZNF587B chr19 58350390 + Exonic hg19 Non-Cancer TCGA-BH-A0B3-11B 2 Out-of-Frame Inter-chr Transcription factor q13.43 Transcription factor 126108 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A0B3-11B 2 3'UTR-3'UTR Inter-chr 126109 ChimerSeq FusionScan TCGA RNA-Seq SPTBN1-ACYP2 SPTBN1 chr2 54753703 + ACYP2 chr2 54531824 + Exonic hg19 Non-Cancer TCGA-BH-A18L-11A 2 Out-of-Frame Inter-chr Tumor suppressor gene p16.2 126110 ChimerSeq FusionScan TCGA RNA-Seq RAPGEF6-NNT RAPGEF6 chr5 130775273 - NNT chr5 43700220 + Exonic hg19 Non-Cancer TCGA-BH-A18L-11A 2 Out-of-Frame Inter-chr q31.1 126111 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-AC-A2FB-11A 2 Out-of-Frame Inter-chr p15.33 126112 ChimerSeq FusionScan TCGA RNA-Seq SPEN-DOK7 SPEN chr1 16174645 + DOK7 chr4 3487265 + Exonic hg19 Non-Cancer TCGA-AC-A2FB-11A 2 In-Frame Inter-chr Transcription factor p36.21 126113 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-AC-A2FB-11A 2 3'UTR-3'UTR Inter-chr 126114 ChimerSeq FusionScan TCGA RNA-Seq F8-CLIC2 F8 chrX 154114408 - CLIC2 chrX 154528458 - Exonic hg19 Non-Cancer TCGA-BH-A0DP-11A 2 In-Frame Inter-chr q28 126115 ChimerSeq FusionScan TCGA RNA-Seq SLC39A7-RB1 SLC39A7 chr6 33168715 + RB1 chr13 48954188 + Exonic hg19 Non-Cancer TCGA-BH-A0DP-11A 2 3'UTR-CDS Inter-chr Oncogene Tumor suppressor gene 126116 ChimerSeq FusionScan TCGA RNA-Seq TPM2-DCTN1 TPM2 chr9 35685060 - DCTN1 chr2 74592368 - Exonic hg19 Non-Cancer TCGA-BH-A0DK-11A 3 Out-of-Frame Inter-chr p13.3 126117 ChimerSeq FusionScan TCGA RNA-Seq AFF1-FNDC3B AFF1 chr4 87928576 + FNDC3B chr3 172003715 + Exonic hg19 Non-Cancer TCGA-BH-A0DK-11A 2 Out-of-Frame Inter-chr Oncogene q21.3 126118 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A0DL-11A 2 3'UTR-3'UTR Inter-chr 126119 ChimerSeq FusionScan TCGA RNA-Seq ATG16L1-WAPAL ATG16L1 chr2 234191399 + WAPAL chr10 88206206 - Exonic hg19 Non-Cancer TCGA-BH-A18P-11A 2 In-Frame Inter-chr 126120 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A18P-11A 2 3'UTR-3'UTR Inter-chr 126121 ChimerSeq FusionScan TCGA RNA-Seq SFT2D2-TBX19 SFT2D2 chr1 168195380 + TBX19 chr1 168260397 + Exonic hg19 Non-Cancer TCGA-BH-A0DQ-11A 2 Out-of-Frame Inter-chr q24.2 Transcription factor 126122 ChimerSeq FusionScan TCGA RNA-Seq HACL1-COLQ HACL1 chr3 15604864 - COLQ chr3 15531144 - Exonic hg19 Non-Cancer TCGA-BH-A0DQ-11A 2 Out-of-Frame Inter-chr p25.1 126123 ChimerSeq FusionScan TCGA RNA-Seq GAS6-FAM70B GAS6 chr13 114541041 - FAM70B chr13 114514708 + Exonic hg19 Non-Cancer TCGA-BH-A0DQ-11A 2 Out-of-Frame Inter-chr Oncogene q34 126124 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-BH-A0BC-11A 2 Out-of-Frame Inter-chr p15.33 126125 ChimerSeq FusionScan TCGA RNA-Seq EBF2-YAP1 EBF2 chr8 25890600 - YAP1 chr11 102033186 + Exonic hg19 Non-Cancer TCGA-BH-A0BC-11A 2 In-Frame Inter-chr Transcription factor p21.2 Tumor suppressor gene 126126 ChimerSeq FusionScan TCGA RNA-Seq ZEB2-SP3 ZEB2 chr2 145277505 - SP3 chr2 174820960 - Exonic hg19 Non-Cancer TCGA-BH-A0BC-11A 2 5'UTR-CDS Inter-chr Transcription factor q22.3 Transcription factor 126127 ChimerSeq FusionScan TCGA RNA-Seq ZNF738-SAFB2 ZNF738 chr19 21541945 + SAFB2 chr19 5600271 - Exonic hg19 Non-Cancer TCGA-BH-A1EO-11A 2 5'UTR-CDS Inter-chr p12 Tumor suppressor gene Transcription factor 126128 ChimerSeq FusionScan TCGA RNA-Seq CLMN-C14orf49 CLMN chr14 95786047 - C14orf49 chr14 95884363 - Exonic hg19 Non-Cancer TCGA-A7-A0CH-11A 2 Out-of-Frame Inter-chr q32.13 126129 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173036437 - Exonic hg19 Non-Cancer TCGA-BH-A0HK-11A 2 Out-of-Frame Inter-chr p15.33 126130 ChimerSeq FusionScan TCGA RNA-Seq SAV1-GYPB SAV1 chr14 51131896 - GYPB chr4 144922436 - Exonic hg19 Non-Cancer TCGA-BH-A1F6-11B 2 In-Frame Inter-chr q22.1 126131 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A1F6-11B 2 3'UTR-3'UTR Inter-chr 126132 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-BH-A1F6-11B 2 Out-of-Frame Inter-chr p15.33 126133 ChimerSeq FusionScan TCGA RNA-Seq MYH9-CACNG2 MYH9 chr22 36783851 - CACNG2 chr22 36962540 - Exonic hg19 Non-Cancer TCGA-BH-A0BW-11A 5 5'UTR-CDS Inter-chr Oncogene Tumor suppressor gene q12.3 126134 ChimerSeq FusionScan TCGA RNA-Seq PCBD2-CATSPER3 PCBD2 chr5 134246156 + CATSPER3 chr5 134305628 + Exonic hg19 Non-Cancer TCGA-BH-A0BW-11A 2 Out-of-Frame Inter-chr q31.1 126135 ChimerSeq FusionScan TCGA RNA-Seq FAM18B1-FAM18B2-CDRT4 FAM18B1 chr17 18707579 + FAM18B2-CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer TCGA-BH-A0BW-11A 2 CDS-3'UTR Inter-chr 126136 ChimerSeq FusionScan TCGA RNA-Seq F8-CLIC2 F8 chrX 154114408 - CLIC2 chrX 154528458 - Exonic hg19 Non-Cancer TCGA-BH-A0BT-11A 2 In-Frame Inter-chr q28 126137 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-E2-A153-11A 2 3'UTR-3'UTR Inter-chr 126138 ChimerSeq FusionScan TCGA RNA-Seq ZNF586-ZNF587B ZNF586 chr19 58288037 + ZNF587B chr19 58350390 + Exonic hg19 Non-Cancer TCGA-E2-A1L7-11A 2 Out-of-Frame Inter-chr Transcription factor q13.43 Transcription factor 126139 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A1FE-11B 5 3'UTR-3'UTR Inter-chr 126140 ChimerSeq FusionScan TCGA RNA-Seq RBM4-C20orf196 RBM4 chr11 66407594 + C20orf196 chr20 5753507 + Exonic hg19 Non-Cancer TCGA-BH-A1FE-11B 2 CDS-5'UTR Inter-chr Tumor suppressor gene q13.2 126141 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-E9-A1RH-11A 2 Out-of-Frame Inter-chr p15.33 126142 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-BH-A0BS-11A 2 Out-of-Frame Inter-chr p15.33 126143 ChimerSeq FusionScan TCGA RNA-Seq NFATC3-PLA2G15 NFATC3 chr16 68225678 + PLA2G15 chr16 68283192 + Exonic hg19 Non-Cancer TCGA-BH-A0BS-11A 2 In-Frame Inter-chr Transcription factor q22.1 126144 ChimerSeq FusionScan TCGA RNA-Seq PTPN14-SYNJ2 PTPN14 chr1 214724525 - SYNJ2 chr6 158454486 + Exonic hg19 Non-Cancer TCGA-BH-A0BS-11A 2 5'UTR-5'UTR Inter-chr q41 126145 ChimerSeq FusionScan TCGA RNA-Seq AGPAT6-ADAM32 AGPAT6 chr8 41456823 + ADAM32 chr8 39079128 + Exonic hg19 Non-Cancer TCGA-BH-A18J-11A 2 In-Frame Inter-chr 126146 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-BH-A0DO-11A 2 Out-of-Frame Inter-chr p15.33 126147 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-BH-A0BV-11A 3 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126148 ChimerSeq FusionScan TCGA RNA-Seq ZMYM4-ZMYM1 ZMYM4 chr1 35791006 + ZMYM1 chr1 35569895 + Exonic hg19 Non-Cancer TCGA-BH-A1EV-11A 2 Out-of-Frame Inter-chr p34.3 126149 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-BH-A209-11A 2 Out-of-Frame Inter-chr p15.33 126150 ChimerSeq FusionScan TCGA RNA-Seq WRB-SH3BGR WRB chr21 40763762 + SH3BGR chr21 40834300 + Exonic hg19 Non-Cancer TCGA-BH-A209-11A 2 In-Frame Inter-chr q22.2 126151 ChimerSeq FusionScan TCGA RNA-Seq F8-CLIC2 F8 chrX 154114408 - CLIC2 chrX 154528458 - Exonic hg19 Non-Cancer TCGA-BH-A204-11A 2 In-Frame Inter-chr q28 126152 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-BH-A0DV-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126153 ChimerSeq FusionScan TCGA RNA-Seq RNF216-RBAK-LOC389458 RNF216 chr7 5764954 - RBAK-LOC389458 chr7 5087663 + Exonic hg19 Non-Cancer TCGA-BH-A0DV-11A 2 CDS-5'UTR Inter-chr p22.1 Transcription factor 126154 ChimerSeq FusionScan TCGA RNA-Seq PCMTD1-TMEM66 PCMTD1 chr8 52811489 - TMEM66 chr8 29921429 - Exonic hg19 Non-Cancer TCGA-BH-A1FJ-11B 2 5'UTR-CDS Inter-chr q11.23 126155 ChimerSeq FusionScan TCGA RNA-Seq HSD17B12-PQLC3 HSD17B12 chr11 43775671 + PQLC3 chr2 11315093 + Exonic hg19 Non-Cancer TCGA-BH-A1FJ-11B 2 In-Frame Inter-chr p11.2 126156 ChimerSeq FusionScan TCGA RNA-Seq FCHSD2-DEPDC7 FCHSD2 chr11 72794739 - DEPDC7 chr11 33047204 + Exonic hg19 Non-Cancer TCGA-BH-A18U-11A 2 Out-of-Frame Inter-chr q13.4 126157 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173036437 - Exonic hg19 Non-Cancer TCGA-BH-A18U-11A 2 Out-of-Frame Inter-chr p15.33 126158 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-E9-A1RI-11A 2 Out-of-Frame Inter-chr p15.33 126159 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A18R-11A 4 3'UTR-3'UTR Inter-chr 126160 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-BH-A0DG-11A 3 Out-of-Frame Inter-chr p15.33 126161 ChimerSeq FusionScan TCGA RNA-Seq CHST9-AQP4 CHST9 chr18 24524292 - AQP4 chr18 24442560 - Exonic hg19 Non-Cancer TCGA-BH-A0DG-11A 2 Out-of-Frame Inter-chr q11.2 126162 ChimerSeq FusionScan TCGA RNA-Seq WRNIP1-C6orf62 WRNIP1 chr6 2766678 + C6orf62 chr6 24709139 - Exonic hg19 Non-Cancer TCGA-BH-A1F0-11B 2 In-Frame Inter-chr p25.2 126163 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A1F0-11B 2 3'UTR-3'UTR Inter-chr 126164 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173036437 - Exonic hg19 Non-Cancer TCGA-A7-A0DB-11A 2 Out-of-Frame Inter-chr p15.33 126165 ChimerSeq FusionScan TCGA RNA-Seq DNAJC25-GNG10-UGCG DNAJC25-GNG10 chr9 114429226 + UGCG chr9 114676884 + Exonic hg19 Non-Cancer TCGA-A7-A13G-11A 2 Out-of-Frame Inter-chr q31.3 126166 ChimerSeq FusionScan TCGA RNA-Seq WRB-SH3BGR WRB chr21 40763762 + SH3BGR chr21 40834300 + Exonic hg19 Non-Cancer TCGA-BH-A208-11A 2 In-Frame Inter-chr q22.2 126167 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-BH-A0H7-11A 4 Out-of-Frame Inter-chr p15.33 126168 ChimerSeq FusionScan TCGA RNA-Seq HEATR7A-CYC1 HEATR7A chr8 145202979 + CYC1 chr8 145151026 + Exonic hg19 Non-Cancer TCGA-BH-A0H7-11A 3 5'UTR-CDS Inter-chr 126169 ChimerSeq FusionScan TCGA RNA-Seq USP34-GKN1 USP34 chr2 61483518 - GKN1 chr2 69204626 + Exonic hg19 Non-Cancer TCGA-BH-A0H7-11A 2 Out-of-Frame Inter-chr p15 Tumor suppressor gene 126170 ChimerSeq FusionScan TCGA RNA-Seq HEATR7A-CYC1 HEATR7A chr8 145202979 + CYC1 chr8 145150735 + Exonic hg19 Non-Cancer TCGA-BH-A0H7-11A 2 5'UTR-CDS Inter-chr 126171 ChimerSeq FusionScan TCGA RNA-Seq WDR61-APOD WDR61 chr15 78591903 - APOD chr3 195306366 - Exonic hg19 Non-Cancer TCGA-BH-A0H7-11A 2 5'UTR-5'UTR Inter-chr q25.1 126172 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A0H7-11A 2 3'UTR-3'UTR Inter-chr 126173 ChimerSeq FusionScan TCGA RNA-Seq IMMP1L-SCIN IMMP1L chr11 31531065 - SCIN chr7 12644138 + Exonic hg19 Non-Cancer TCGA-CW-5585-11A 2 5'UTR-5'UTR Inter-chr p13 126174 ChimerSeq FusionScan TCGA RNA-Seq FAM190A-TSPAN3 FAM190A chr4 91048982 + TSPAN3 chr15 77348597 - Exonic hg19 Non-Cancer TCGA-CW-5585-11A 2 5'UTR-CDS Inter-chr 126175 ChimerSeq FusionScan TCGA RNA-Seq CTIF-CD226 CTIF chr18 46066202 + CD226 chr18 67614669 - Exonic hg19 Non-Cancer TCGA-CW-5585-11A 2 5'UTR-5'UTR Inter-chr 126176 ChimerSeq FusionScan TCGA RNA-Seq WRB-SH3BGR WRB chr21 40763762 + SH3BGR chr21 40834300 + Exonic hg19 Non-Cancer TCGA-CW-6088-11A 2 In-Frame Inter-chr q22.2 126177 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-BR-6852-11A 3 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126178 ChimerSeq FusionScan TCGA RNA-Seq CEP170-XRN2 CEP170 chr1 243362361 - XRN2 chr20 21362631 + Exonic hg19 Non-Cancer TCGA-BR-6852-11A 2 In-Frame Inter-chr 126179 ChimerSeq FusionScan TCGA RNA-Seq PWP1-ANKRD35 PWP1 chr12 108082579 + ANKRD35 chr1 145560888 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 In-Frame Inter-chr q23.3 126180 ChimerSeq FusionScan TCGA RNA-Seq BRI3BP-UBC BRI3BP chr12 125478549 + UBC chr12 125398320 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 CDS-5'UTR Inter-chr q24.31 126181 ChimerSeq FusionScan TCGA RNA-Seq DSC3-RPS6 DSC3 chr18 28576756 - RPS6 chr9 19378916 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 CDS-3'UTR Inter-chr Tumor suppressor gene q12.1 126182 ChimerSeq FusionScan TCGA RNA-Seq ZFY-ZFX ZFY chrY 2803810 + ZFX chrX 24169807 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 5'UTR-5'UTR Inter-chr Transcription factor p11.2 Transcription factor 126183 ChimerSeq FusionScan TCGA RNA-Seq ZDHHC23-TMEM173 ZDHHC23 chr3 113673257 + TMEM173 chr5 138858093 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 Out-of-Frame Inter-chr q13.31 126184 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126185 ChimerSeq FusionScan TCGA RNA-Seq TIAM1-SF3B3 TIAM1 chr21 32711557 - SF3B3 chr16 70597778 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 5'UTR-CDS Inter-chr q22.11 126186 ChimerSeq FusionScan TCGA RNA-Seq ZFX-APOO ZFX chrX 24167911 + APOO chrX 23897151 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 5'UTR-CDS Inter-chr Transcription factor p22.11 126187 ChimerSeq FusionScan TCGA RNA-Seq AKT3-CALD1 AKT3 chr1 244006426 - CALD1 chr7 134528634 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 CDS-5'UTR Inter-chr AGC:Akt Oncogene 126188 ChimerSeq FusionScan TCGA RNA-Seq RFWD2-TROVE2 RFWD2 chr1 176153768 - TROVE2 chr1 193038163 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 CDS-5'UTR Inter-chr Tumor suppressor gene q25.2 126189 ChimerSeq FusionScan TCGA RNA-Seq ACTG2-ACTA2 ACTG2 chr2 74128564 + ACTA2 chr10 90707143 - Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 In-Frame Inter-chr p13.1 126190 ChimerSeq FusionScan TCGA RNA-Seq ACTN4-ACTN1 ACTN4 chr19 39195660 + ACTN1 chr14 69376759 - Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 In-Frame Inter-chr 126191 ChimerSeq FusionScan TCGA RNA-Seq WDR6-BCAR1 WDR6 chr3 49044964 + BCAR1 chr16 75269884 - Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 Out-of-Frame Inter-chr p21.31 126192 ChimerSeq FusionScan TCGA RNA-Seq NCK2-NFYC NCK2 chr2 106433070 + NFYC chr1 41213205 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 5'UTR-CDS Inter-chr q12.2 Transcription factor 126193 ChimerSeq FusionScan TCGA RNA-Seq LRCH1-N6AMT2 LRCH1 chr13 47127838 + N6AMT2 chr13 21303355 - Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 In-Frame Inter-chr q14.13 126194 ChimerSeq FusionScan TCGA RNA-Seq FBXL19-ORAI2 FBXL19 chr16 30958269 + ORAI2 chr7 102086959 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 Out-of-Frame Inter-chr Transcription factor p11.2 126195 ChimerSeq FusionScan TCGA RNA-Seq ZBTB20-NAA50 ZBTB20 chr3 114412374 - NAA50 chr3 113442942 - Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 5'UTR-CDS Inter-chr Transcription factor q13.31 126196 ChimerSeq FusionScan TCGA RNA-Seq ATR-UBE2E2 ATR chr3 142284962 - UBE2E2 chr3 23250182 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 3'UTR-5'UTR Inter-chr Atypical:PIKK Oncogene Tumor suppressor gene q23 126197 ChimerSeq FusionScan TCGA RNA-Seq ACTN4-ACTN1 ACTN4 chr19 39215205 + ACTN1 chr14 69347706 - Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 In-Frame Inter-chr 126198 ChimerSeq FusionScan TCGA RNA-Seq HEPH-UNC50 HEPH chrX 65428088 + UNC50 chr2 99232669 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 Out-of-Frame Inter-chr q12 126199 ChimerSeq FusionScan TCGA RNA-Seq NDUFB5-DNAJC19 NDUFB5 chr3 179322727 + DNAJC19 chr3 180703784 - Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 Out-of-Frame Inter-chr q26.33 126200 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-CG-5722-11A 3 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126201 ChimerSeq FusionScan TCGA RNA-Seq PGA3-CTSE PGA3 chr11 60971741 + CTSE chr1 206319100 + Exonic hg19 Non-Cancer TCGA-BR-8060-11A 5 In-Frame Inter-chr q12.2 126202 ChimerSeq FusionScan TCGA RNA-Seq PGA4-CTSE PGA4 chr11 60990577 + CTSE chr1 206319100 + Exonic hg19 Non-Cancer TCGA-BR-8060-11A 5 In-Frame Inter-chr q12.2 126203 ChimerSeq FusionScan TCGA RNA-Seq PGA3-PGC PGA3 chr11 60974099 + PGC chr6 41711127 - Exonic hg19 Non-Cancer TCGA-BR-8060-11A 2 In-Frame Inter-chr q12.2 126204 ChimerSeq FusionScan TCGA RNA-Seq ARMCX5-GPRASP2-GPRASP2 ARMCX5-GPRASP2 chrX 101860581 + GPRASP2 chrX 101969116 + Exonic hg19 Non-Cancer TCGA-BR-8060-11A 2 3'UTR-5'UTR Inter-chr q22.1 126205 ChimerSeq FusionScan TCGA RNA-Seq HLA-DQB1-SRSF3 HLA-DQB1 chr6 32632574 - SRSF3 chr6 36568928 + Exonic hg19 Non-Cancer TCGA-BR-8060-11A 2 Out-of-Frame Inter-chr 126206 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-BR-8060-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126207 ChimerSeq FusionScan TCGA RNA-Seq GTPBP2-PRICKLE4 GTPBP2 chr6 43593962 - PRICKLE4 chr6 41751868 + Exonic hg19 Non-Cancer TCGA-BR-8060-11A 2 Out-of-Frame Inter-chr p21.1 126208 ChimerSeq FusionScan TCGA RNA-Seq MYH11-PDLIM7 MYH11 chr16 15810996 - PDLIM7 chr5 176924602 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 3 CDS-5'UTR Inter-chr Oncogene 126209 ChimerSeq FusionScan TCGA RNA-Seq MYH11-MYH14 MYH11 chr16 15876241 - MYH14 chr19 50730159 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 3 In-Frame Inter-chr Oncogene 126210 ChimerSeq FusionScan TCGA RNA-Seq ACTN4-ACTN1 ACTN4 chr19 39195660 + ACTN1 chr14 69376759 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 In-Frame Inter-chr 126211 ChimerSeq FusionScan TCGA RNA-Seq TPM1-COX20 TPM1 chr15 63336030 + COX20 chr1 245005245 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 In-Frame Inter-chr q22.2 126212 ChimerSeq FusionScan TCGA RNA-Seq SPIN3-SPIN1 SPIN3 chrX 57021155 - SPIN1 chr9 91083286 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 3'UTR-CDS Inter-chr p11.21 126213 ChimerSeq FusionScan TCGA RNA-Seq NAV2-NDUFAF2 NAV2 chr11 19372574 + NDUFAF2 chr5 60368951 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 Out-of-Frame Inter-chr p15.1 126214 ChimerSeq FusionScan TCGA RNA-Seq C21orf7-GALNT12 C21orf7 chr21 30532377 + GALNT12 chr9 101597530 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 In-Frame Inter-chr 126215 ChimerSeq FusionScan TCGA RNA-Seq SOCS5-ILKAP SOCS5 chr2 46926588 + ILKAP chr2 239082294 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 5'UTR-CDS Inter-chr p21 126216 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-IN-AB1X-11A 6 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126217 ChimerSeq FusionScan TCGA RNA-Seq FOXJ3-HNRNPH1 FOXJ3 chr1 42776720 - HNRNPH1 chr5 179048398 - Exonic hg19 Non-Cancer TCGA-IN-AB1X-11A 2 Out-of-Frame Inter-chr Transcription factor p34.2 126218 ChimerSeq FusionScan TCGA RNA-Seq CRCT1-MYL12B CRCT1 chr1 152487028 + MYL12B chr18 3272881 + Exonic hg19 Non-Cancer TCGA-IN-AB1X-11A 2 5'UTR-5'UTR Inter-chr q21.3 126219 ChimerSeq FusionScan TCGA RNA-Seq ZNF525-ZNF761 ZNF525 chr19 53869012 + ZNF761 chr19 53950448 + Exonic hg19 Non-Cancer TCGA-IN-AB1X-11A 2 5'UTR-5'UTR Inter-chr Transcription factor q13.42 Transcription factor 126220 ChimerSeq FusionScan TCGA RNA-Seq FTH1-KRT78 FTH1 chr11 61734783 - KRT78 chr12 53233768 - Exonic hg19 Non-Cancer TCGA-IN-AB1X-11A 2 In-Frame Inter-chr q12.3 126221 ChimerSeq FusionScan TCGA RNA-Seq USP34-FAM129B USP34 chr2 61542009 - FAM129B chr9 130294057 - Exonic hg19 Non-Cancer TCGA-IN-AB1X-11A 2 In-Frame Inter-chr p15 126222 ChimerSeq FusionScan TCGA RNA-Seq PAPD4-MIER3 PAPD4 chr5 78964851 + MIER3 chr5 56234844 - Exonic hg19 Non-Cancer TCGA-IN-AB1X-11A 2 Out-of-Frame Inter-chr q14.1 126223 ChimerSeq FusionScan TCGA RNA-Seq ELMO2-GMEB2 ELMO2 chr20 45035186 - GMEB2 chr20 62236193 - Exonic hg19 Non-Cancer TCGA-IN-AB1X-11A 2 5'UTR-CDS Inter-chr q13.12 Transcription factor 126224 ChimerSeq FusionScan TCGA RNA-Seq UBC-LPIN1 UBC chr12 125399132 - LPIN1 chr2 11905658 + Exonic hg19 Non-Cancer TCGA-IN-AB1X-11A 2 5'UTR-5'UTR Inter-chr q24.31 126225 ChimerSeq FusionScan TCGA RNA-Seq TMEM201-DAZAP1 TMEM201 chr1 9649101 + DAZAP1 chr19 1417498 + Exonic hg19 Non-Cancer TCGA-IN-AB1X-11A 2 In-Frame Inter-chr p36.22 126226 ChimerSeq FusionScan TCGA RNA-Seq PLEKHM1-SLC16A6 PLEKHM1 chr17 43527983 - SLC16A6 chr17 66265487 - Exonic hg19 Non-Cancer TCGA-IN-AB1X-11A 2 5'UTR-CDS Inter-chr 126227 ChimerSeq FusionScan TCGA RNA-Seq ATF6B-TMEM138 ATF6B chr6 32088547 - TMEM138 chr11 61136068 + Exonic hg19 Non-Cancer TCGA-CG-5728-11A 3 5'UTR-5'UTR Inter-chr Transcription factor 126228 ChimerSeq FusionScan TCGA RNA-Seq ZNF263-CREBBP ZNF263 chr16 3334205 + CREBBP chr16 3808973 - Exonic hg19 Non-Cancer TCGA-CG-5728-11A 3 Out-of-Frame Inter-chr Transcription factor p13.3 Oncogene Tumor suppressor gene 126229 ChimerSeq FusionScan TCGA RNA-Seq GFPT1-HK1 GFPT1 chr2 69597132 - HK1 chr10 71103582 + Exonic hg19 Non-Cancer TCGA-CG-5728-11A 2 Out-of-Frame Inter-chr p13.3 126230 ChimerSeq FusionScan TCGA RNA-Seq ORAI3-ORAI2 ORAI3 chr16 30960838 + ORAI2 chr7 102086959 + Exonic hg19 Non-Cancer TCGA-CG-5728-11A 2 In-Frame Inter-chr p11.2 126231 ChimerSeq FusionScan TCGA RNA-Seq HACL1-COLQ HACL1 chr3 15604864 - COLQ chr3 15531144 - Exonic hg19 Non-Cancer TCGA-CG-5728-11A 2 Out-of-Frame Inter-chr p25.1 126232 ChimerSeq FusionScan TCGA RNA-Seq ZNF525-ZNF761 ZNF525 chr19 53869012 + ZNF761 chr19 53950448 + Exonic hg19 Non-Cancer TCGA-CG-5733-11A 2 5'UTR-5'UTR Inter-chr Transcription factor q13.42 Transcription factor 126233 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-CG-5733-11A 2 Out-of-Frame Inter-chr q13.2 126234 ChimerSeq FusionScan TCGA RNA-Seq LRRC33-PIGX LRRC33 chr3 196381518 + PIGX chr3 196443728 + Exonic hg19 Non-Cancer TCGA-CG-5733-11A 2 Out-of-Frame Inter-chr 126235 ChimerSeq FusionScan TCGA RNA-Seq PCMTD1-CYSTM1 PCMTD1 chr8 52758220 - CYSTM1 chr5 139574030 + Exonic hg19 Non-Cancer TCGA-CG-5720-11A 2 CDS-5'UTR Inter-chr q11.23 126236 ChimerSeq FusionScan TCGA RNA-Seq UQCRC2-BAZ1B UQCRC2 chr16 21964777 + BAZ1B chr7 72892899 - Exonic hg19 Non-Cancer TCGA-CG-5720-11A 2 In-Frame Inter-chr 126237 ChimerSeq FusionScan TCGA RNA-Seq PECR-TUBGCP6 PECR chr2 216930034 - TUBGCP6 chr22 50658444 - Exonic hg19 Non-Cancer TCGA-CG-5720-11A 2 In-Frame Inter-chr q35 126238 ChimerSeq FusionScan TCGA RNA-Seq PSMD14-TANK PSMD14 chr2 162175384 + TANK chr2 162059997 + Exonic hg19 Non-Cancer TCGA-CG-5720-11A 2 In-Frame Inter-chr q24.2 Tumor suppressor gene 126239 ChimerSeq FusionScan TCGA RNA-Seq ALG6-RALGAPA1 ALG6 chr1 63879817 + RALGAPA1 chr14 36008896 - Exonic hg19 Non-Cancer TCGA-CG-5720-11A 2 Out-of-Frame Inter-chr p31.3 126240 ChimerSeq FusionScan TCGA RNA-Seq DDX17-UBE2I DDX17 chr22 38894089 - UBE2I chr16 1364293 + Exonic hg19 Non-Cancer TCGA-CG-5720-11A 2 In-Frame Inter-chr q13.1 126241 ChimerSeq FusionScan TCGA RNA-Seq UAP1-ATF6 UAP1 chr1 162531567 + ATF6 chr1 161816238 + Exonic hg19 Non-Cancer TCGA-CG-5720-11A 2 5'UTR-CDS Inter-chr q23.3 Transcription factor 126242 ChimerSeq FusionScan TCGA RNA-Seq ZNF627-DOCK6 ZNF627 chr19 11708445 + DOCK6 chr19 11310215 - Exonic hg19 Non-Cancer TCGA-CG-5720-11A 2 Out-of-Frame Inter-chr Transcription factor p13.2 126243 ChimerSeq FusionScan TCGA RNA-Seq PLXNA2-IRF6 PLXNA2 chr1 208315673 - IRF6 chr1 209969897 - Exonic hg19 Non-Cancer TCGA-CG-5720-11A 2 In-Frame Inter-chr q32.2 Transcription factor 126244 ChimerSeq FusionScan TCGA RNA-Seq ITCH-KANSL1 ITCH chr20 32951155 + KANSL1 chr17 44249598 - Exonic hg19 Non-Cancer TCGA-CG-5720-11A 2 5'UTR-5'UTR Inter-chr q11.22 126245 ChimerSeq FusionScan TCGA RNA-Seq FGD2-VAV1 FGD2 chr6 36979630 + VAV1 chr19 6826622 + Exonic hg19 Non-Cancer TCGA-CG-5720-11A 2 In-Frame Inter-chr p21.2 126246 ChimerSeq FusionScan TCGA RNA-Seq ACTR2-UGP2 ACTR2 chr2 65492309 + UGP2 chr2 64109599 + Exonic hg19 Non-Cancer TCGA-BR-6802-11A 2 In-Frame Inter-chr TKL:STKR p14 126247 ChimerSeq FusionScan TCGA RNA-Seq HSPG2-CYSTM1 HSPG2 chr1 22263647 - CYSTM1 chr5 139574030 + Exonic hg19 Non-Cancer TCGA-BR-6802-11A 2 CDS-5'UTR Inter-chr p36.12 126248 ChimerSeq FusionScan TCGA RNA-Seq WBP5-MAST2 WBP5 chrX 102611534 + MAST2 chr1 46496678 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 5'UTR-CDS Inter-chr AGC:MAST 126249 ChimerSeq FusionScan TCGA RNA-Seq EIF3J-CYSTM1 EIF3J chr15 44843720 + CYSTM1 chr5 139574030 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 CDS-5'UTR Inter-chr q21.1 126250 ChimerSeq FusionScan TCGA RNA-Seq ZNF440-MKRN1 ZNF440 chr19 11925265 + MKRN1 chr7 140159736 - Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 Out-of-Frame Inter-chr Transcription factor p13.2 126251 ChimerSeq FusionScan TCGA RNA-Seq CCBP2-SETD2 CCBP2 chr3 42851024 + SETD2 chr3 47061330 - Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 5'UTR-CDS Inter-chr Oncogene Tumor suppressor gene 126252 ChimerSeq FusionScan TCGA RNA-Seq CDCP1-CCDC13 CDCP1 chr3 45187697 - CCDC13 chr3 42799843 - Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 CDS-5'UTR Inter-chr Tumor suppressor gene p21.31 126253 ChimerSeq FusionScan TCGA RNA-Seq SNX24-CSNK1G3 SNX24 chr5 122181388 + CSNK1G3 chr5 122881110 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 CDS-5'UTR Inter-chr q23.2 126254 ChimerSeq FusionScan TCGA RNA-Seq XIAP-RNF128 XIAP chrX 122994143 + RNF128 chrX 106016142 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 5'UTR-CDS Inter-chr q25 126255 ChimerSeq FusionScan TCGA RNA-Seq SLX1B-KRT19 SLX1B chr16 29467206 + KRT19 chr17 39681525 - Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 In-Frame Inter-chr p11.2 Tumor suppressor gene 126256 ChimerSeq FusionScan TCGA RNA-Seq KLK13-TMPRSS9 KLK13 chr19 51561794 - TMPRSS9 chr19 2421851 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 3 In-Frame Inter-chr q13.41 126257 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 3 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126258 ChimerSeq FusionScan TCGA RNA-Seq KLK13-CELA1 KLK13 chr19 51561794 - CELA1 chr12 51723617 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 3 In-Frame Inter-chr q13.41 126259 ChimerSeq FusionScan TCGA RNA-Seq FOPNL-TMX3 FOPNL chr16 15967347 - TMX3 chr18 66369027 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 In-Frame Inter-chr p13.11 126260 ChimerSeq FusionScan TCGA RNA-Seq CDH1-ALDH3A2 CDH1 chr16 68772314 + ALDH3A2 chr17 19578870 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 Out-of-Frame Inter-chr Oncogene Tumor suppressor gene q22.1 126261 ChimerSeq FusionScan TCGA RNA-Seq POU2F3-ARHGEF12 POU2F3 chr11 120178324 + ARHGEF12 chr11 120343758 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 In-Frame Inter-chr Tumor suppressor gene Transcription factor q23.3 Tumor suppressor gene 126262 ChimerSeq FusionScan TCGA RNA-Seq ALDH3B2-ALDH3A1 ALDH3B2 chr11 67433786 - ALDH3A1 chr17 19645525 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 In-Frame Inter-chr q13.2 126263 ChimerSeq FusionScan TCGA RNA-Seq VPS29-GTF2H3 VPS29 chr12 110939853 - GTF2H3 chr12 124130001 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 In-Frame Inter-chr q24.11 126264 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 Out-of-Frame Inter-chr q13.2 126265 ChimerSeq FusionScan TCGA RNA-Seq CSNK2A1-HDLBP CSNK2A1 chr20 524315 - HDLBP chr2 242207956 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 5'UTR-5'UTR Inter-chr Oncogene p13 126266 ChimerSeq FusionScan TCGA RNA-Seq ZNF417-ZNF587B ZNF417 chr19 58427746 - ZNF587B chr19 58350390 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 In-Frame Inter-chr Transcription factor q13.43 Transcription factor 126267 ChimerSeq FusionScan TCGA RNA-Seq ANKIB1-AKAP9 ANKIB1 chr7 91957214 + AKAP9 chr7 91722410 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 In-Frame Inter-chr q21.2 Oncogene 126268 ChimerSeq FusionScan TCGA RNA-Seq ZNF586-ZNF587B ZNF586 chr19 58288037 + ZNF587B chr19 58350390 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 Out-of-Frame Inter-chr Transcription factor q13.43 Transcription factor 126269 ChimerSeq FusionScan TCGA RNA-Seq NOTCH2NL-YPEL5 NOTCH2NL chr1 145248894 + YPEL5 chr2 30379493 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 CDS-5'UTR Inter-chr q21.1 126270 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-HU-8238-11A 5 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126271 ChimerSeq FusionScan TCGA RNA-Seq NAT1-LAP3 NAT1 chr8 18076998 + LAP3 chr4 17586594 + Exonic hg19 Non-Cancer TCGA-HU-8238-11A 2 Out-of-Frame Inter-chr p22 126272 ChimerSeq FusionScan TCGA RNA-Seq SI-LOC100124692 SI chr3 164727066 - LOC100124692 chr7 141887549 + Exonic hg19 Non-Cancer TCGA-HU-8238-11A 2 CDS-5'UTR Inter-chr q26.1 126273 ChimerSeq FusionScan TCGA RNA-Seq CMC1-RBMS3 CMC1 chr3 28304871 + RBMS3 chr3 29781210 + Exonic hg19 Non-Cancer TCGA-BR-6454-11A 2 Out-of-Frame Inter-chr p24.1 Tumor suppressor gene 126274 ChimerSeq FusionScan TCGA RNA-Seq PSMB5-MRPL2 PSMB5 chr14 23502576 - MRPL2 chr6 43022224 - Exonic hg19 Non-Cancer TCGA-BR-6454-11A 2 Out-of-Frame Inter-chr q11.2 126275 ChimerSeq FusionScan TCGA RNA-Seq MYH11-MYH14 MYH11 chr16 15876241 - MYH14 chr19 50730159 + Exonic hg19 Non-Cancer TCGA-HU-A4G3-11A 4 In-Frame Inter-chr Oncogene 126276 ChimerSeq FusionScan TCGA RNA-Seq RPL10-PGK1 RPL10 chrX 153628282 + PGK1 chrX 77369512 + Exonic hg19 Non-Cancer TCGA-HU-A4G3-11A 2 In-Frame Inter-chr Tumor suppressor gene q28 126277 ChimerSeq FusionScan TCGA RNA-Seq FAM91A2-MXI1 FAM91A2 chr1 149576700 + MXI1 chr10 111987946 + Exonic hg19 Non-Cancer TCGA-HU-A4G3-11A 2 5'UTR-5'UTR Inter-chr Tumor suppressor gene Transcription factor 126278 ChimerSeq FusionScan TCGA RNA-Seq SLC25A12-ZNF32 SLC25A12 chr2 172749714 - ZNF32 chr10 44141650 - Exonic hg19 Non-Cancer TCGA-HU-A4G3-11A 2 CDS-5'UTR Inter-chr q31.1 Transcription factor 126279 ChimerSeq FusionScan TCGA RNA-Seq PRMT2-GPBP1 PRMT2 chr21 48069651 + GPBP1 chr5 56509900 + Exonic hg19 Non-Cancer TCGA-BR-6457-11A 2 CDS-5'UTR Inter-chr q22.3 Transcription factor 126280 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-IN-AB1V-11A 6 3'UTR-3'UTR Inter-chr 126281 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-IN-AB1V-11A 3 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126282 ChimerSeq FusionScan TCGA RNA-Seq MYH11-MYH14 MYH11 chr16 15876241 - MYH14 chr19 50730159 + Exonic hg19 Non-Cancer TCGA-IN-AB1V-11A 3 In-Frame Inter-chr Oncogene 126283 ChimerSeq FusionScan TCGA RNA-Seq IFNGR2-C21orf33 IFNGR2 chr21 34793992 + C21orf33 chr21 45563086 + Exonic hg19 Non-Cancer TCGA-IN-AB1V-11A 2 Out-of-Frame Inter-chr 126284 ChimerSeq FusionScan TCGA RNA-Seq FAM18B1-FAM18B2-CDRT4 FAM18B1 chr17 18707579 + FAM18B2-CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer TCGA-IN-AB1V-11A 2 CDS-3'UTR Inter-chr 126285 ChimerSeq FusionScan TCGA RNA-Seq ATF6B-GLI4 ATF6B chr6 32085635 - GLI4 chr8 144356873 + Exonic hg19 Non-Cancer TCGA-IN-AB1V-11A 2 5'UTR-CDS Inter-chr Transcription factor Transcription factor 126286 ChimerSeq FusionScan TCGA RNA-Seq HLA-L-HLA-C HLA-L chr6 30229256 + HLA-C chr6 31237302 - Exonic hg19 Non-Cancer TCGA-BR-6458-11A 4 Out-of-Frame Inter-chr 126287 ChimerSeq FusionScan TCGA RNA-Seq HLA-L-HLA-C HLA-L chr6 30229256 + HLA-C chr6 31237862 - Exonic hg19 Non-Cancer TCGA-BR-6458-11A 3 Out-of-Frame Inter-chr 126288 ChimerSeq FusionScan TCGA RNA-Seq HLA-L-HLA-H HLA-L chr6 30227474 + HLA-H chr6 29855731 + Exonic hg19 Non-Cancer TCGA-BR-6458-11A 2 Out-of-Frame Inter-chr 126289 ChimerSeq FusionScan TCGA RNA-Seq GSK3B-ANKRD32 GSK3B chr3 119631550 - ANKRD32 chr5 93964515 + Exonic hg19 Non-Cancer TCGA-BR-6458-11A 2 CDS-5'UTR Inter-chr CMGC:GSK Tumor suppressor gene q13.33 126290 ChimerSeq FusionScan TCGA RNA-Seq FAM18B1-FAM18B2-CDRT4 FAM18B1 chr17 18707579 + FAM18B2-CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer TCGA-BR-6458-11A 2 CDS-3'UTR Inter-chr 126291 ChimerSeq FusionScan TCGA RNA-Seq HLA-A-HLA-J HLA-A chr6 29910403 + HLA-J chr6 29974576 + Exonic hg19 Non-Cancer TCGA-BR-6458-11A 2 Out-of-Frame Inter-chr p22.1 126292 ChimerSeq FusionScan TCGA RNA-Seq TM9SF4-TTC38 TM9SF4 chr20 30734658 + TTC38 chr22 46682969 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 4 In-Frame Inter-chr q11.21 126293 ChimerSeq FusionScan TCGA RNA-Seq MAGI1-LPP MAGI1 chr3 66023670 - LPP chr3 188326948 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 4 Out-of-Frame Inter-chr Oncogene Oncogene 126294 ChimerSeq FusionScan TCGA RNA-Seq ZNF148-USP9X ZNF148 chr3 125093945 - USP9X chrX 41082469 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 3 5'UTR-CDS Inter-chr Transcription factor q21.2 Oncogene 126295 ChimerSeq FusionScan TCGA RNA-Seq LDLR-ACY1 LDLR chr19 11222315 + ACY1 chr3 52019222 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 3 In-Frame Inter-chr p13.2 Tumor suppressor gene 126296 ChimerSeq FusionScan TCGA RNA-Seq MTDH-MRPS28 MTDH chr8 98657115 + MRPS28 chr8 80915415 - Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 In-Frame Inter-chr q22.1 126297 ChimerSeq FusionScan TCGA RNA-Seq REG4-OGT REG4 chr1 120354031 - OGT chrX 70767756 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 5'UTR-CDS Inter-chr p12 126298 ChimerSeq FusionScan TCGA RNA-Seq FARP1-STK24 FARP1 chr13 98865667 + STK24 chr13 99134575 - Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 In-Frame Inter-chr q32.2 126299 ChimerSeq FusionScan TCGA RNA-Seq STRN4-PIGG STRN4 chr19 47249405 - PIGG chr4 527606 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 In-Frame Inter-chr q13.32 126300 ChimerSeq FusionScan TCGA RNA-Seq AVEN-MEIS2 AVEN chr15 34330980 - MEIS2 chr15 37242601 - Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 In-Frame Inter-chr q14 Transcription factor 126301 ChimerSeq FusionScan TCGA RNA-Seq RPL5-SLC20A1 RPL5 chr1 93297674 + SLC20A1 chr2 113417963 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 Out-of-Frame Inter-chr Tumor suppressor gene p22.1 126302 ChimerSeq FusionScan TCGA RNA-Seq CNPY2-PRRC2C CNPY2 chr12 56708634 - PRRC2C chr1 171491315 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 In-Frame Inter-chr q13.3 126303 ChimerSeq FusionScan TCGA RNA-Seq FAM3D-RBP2 FAM3D chr3 58652302 - RBP2 chr3 139181132 - Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 5'UTR-CDS Inter-chr p14.2 Tumor suppressor gene 126304 ChimerSeq FusionScan TCGA RNA-Seq PARP4-VDAC1 PARP4 chr13 25086843 - VDAC1 chr5 133328709 - Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 5'UTR-5'UTR Inter-chr q12.12 126305 ChimerSeq FusionScan TCGA RNA-Seq LMTK2-FAM3C LMTK2 chr7 97736592 + FAM3C chr7 121012193 - Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 In-Frame Inter-chr q21.3 126306 ChimerSeq FusionScan TCGA RNA-Seq TFG-GPR128 TFG chr3 100438902 + GPR128 chr3 100348441 + Exonic hg19 Non-Cancer TCGA-BR-7717-11A 6 In-Frame Inter-chr q12.2 126307 ChimerSeq FusionScan TCGA RNA-Seq RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer TCGA-BR-7717-11A 3 Out-of-Frame Inter-chr q13.2 126308 ChimerSeq FusionScan TCGA RNA-Seq LRRFIP2-GTDC1 LRRFIP2 chr3 37190384 - GTDC1 chr2 144993304 - Exonic hg19 Non-Cancer TCGA-BR-7717-11A 2 CDS-5'UTR Inter-chr p22.2 126309 ChimerSeq FusionScan TCGA RNA-Seq SNHG8-CEP170 SNHG8 chr4 119200292 + CEP170 chr1 243388623 - Exonic hg19 Non-Cancer TCGA-BR-7717-11A 2 5'UTR-5'UTR Inter-chr q26 126310 ChimerSeq FusionScan TCGA RNA-Seq TMEM231-DCTN6 TMEM231 chr16 75579249 - DCTN6 chr8 30034641 + Exonic hg19 Non-Cancer TCGA-BR-7717-11A 2 Out-of-Frame Inter-chr q23.1 126311 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 4 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126312 ChimerSeq FusionScan TCGA RNA-Seq MYH9-SPINK4 MYH9 chr22 36783851 - SPINK4 chr9 33246613 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 5'UTR-CDS Inter-chr Oncogene Tumor suppressor gene q12.3 126313 ChimerSeq FusionScan TCGA RNA-Seq PCBD2-CATSPER3 PCBD2 chr5 134246156 + CATSPER3 chr5 134305628 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 Out-of-Frame Inter-chr q31.1 126314 ChimerSeq FusionScan TCGA RNA-Seq IQCE-LRBA IQCE chr7 2613122 + LRBA chr4 151186964 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 Out-of-Frame Inter-chr p22.3 126315 ChimerSeq FusionScan TCGA RNA-Seq BTBD3-WDR27 BTBD3 chr20 11871602 + WDR27 chr6 170034621 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 5'UTR-CDS Inter-chr p12.2 126316 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 3'UTR-3'UTR Inter-chr 126317 ChimerSeq FusionScan TCGA RNA-Seq ANKRD28-MAGI1 ANKRD28 chr3 15900883 - MAGI1 chr3 65607763 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 Out-of-Frame Inter-chr p25.1 Oncogene 126318 ChimerSeq FusionScan TCGA RNA-Seq JTB-LAD1 JTB chr1 153949451 - LAD1 chr1 201353963 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 Out-of-Frame Inter-chr q21.3 126319 ChimerSeq FusionScan TCGA RNA-Seq KIF13B-CTNNB1 KIF13B chr8 29102862 - CTNNB1 chr3 41265511 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 CDS-5'UTR Inter-chr p12 Oncogene 126320 ChimerSeq FusionScan TCGA RNA-Seq MGAT4A-TMEM87B MGAT4A chr2 99342701 - TMEM87B chr2 112838633 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 In-Frame Inter-chr q11.2 126321 ChimerSeq FusionScan TCGA RNA-Seq OSBPL3-ADCK3 OSBPL3 chr7 25019504 - ADCK3 chr1 227165149 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 5'UTR-CDS Inter-chr p15.3 Atypical:ABC1 126322 ChimerSeq FusionScan TCGA RNA-Seq JHDM1D-RHEB JHDM1D chr7 139876543 - RHEB chr7 151188100 - Exonic hg19 Non-Cancer TCGA-CG-5721-11A 2 Out-of-Frame Inter-chr Oncogene 126323 ChimerSeq FusionScan TCGA RNA-Seq TBL1XR1-PDCD10 TBL1XR1 chr3 176914908 - PDCD10 chr3 167422683 - Exonic hg19 Non-Cancer TCGA-CG-5721-11A 2 5'UTR-CDS Inter-chr q26.32 126324 ChimerSeq FusionScan TCGA RNA-Seq FAM18B1-FAM18B2-CDRT4 FAM18B1 chr17 18707579 + FAM18B2-CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer TCGA-CG-5721-11A 2 CDS-3'UTR Inter-chr 126325 ChimerSeq FusionScan TCGA RNA-Seq FUCA2-SYNCRIP FUCA2 chr6 143818525 - SYNCRIP chr6 86333830 - Exonic hg19 Non-Cancer TCGA-CG-5721-11A 2 In-Frame Inter-chr q24.2 126326 ChimerSeq FusionScan TCGA RNA-Seq TTC35-PSMD11 TTC35 chr8 109455927 + PSMD11 chr17 30773962 + Exonic hg19 Non-Cancer TCGA-BR-6453-11A 2 In-Frame Inter-chr 126327 ChimerSeq FusionScan TCGA RNA-Seq PDAP1-ATP5J2-PTCD1 PDAP1 chr7 99006158 - ATP5J2-PTCD1 chr7 99057816 - Exonic hg19 Non-Cancer TCGA-BR-6453-11A 2 In-Frame Inter-chr q22.1 126328 ChimerSeq FusionScan TCGA RNA-Seq XPO6-AKAP13 XPO6 chr16 28222686 - AKAP13 chr15 86286722 + Exonic hg19 Non-Cancer TCGA-BR-6453-11A 2 In-Frame Inter-chr p12.1 126329 ChimerSeq FusionScan TCGA RNA-Seq ERGIC1-MRPS27 ERGIC1 chr5 172261436 + MRPS27 chr5 71533955 - Exonic hg19 Non-Cancer TCGA-BR-6453-11A 2 In-Frame Inter-chr q35.1 126330 ChimerSeq FusionScan TCGA RNA-Seq UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer TCGA-BR-6453-11A 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126331 ChimerSeq FusionScan TCGA RNA-Seq A4GALT-CYB5R3 A4GALT chr22 43116802 - CYB5R3 chr22 43032852 - Exonic hg19 Non-Cancer TCGA-BR-6453-11A 2 5'UTR-5'UTR Inter-chr q13.2 126332 ChimerSeq FusionScan TCGA RNA-Seq ACTG2-ACTA2 ACTG2 chr2 74128564 + ACTA2 chr10 90707143 - Exonic hg19 Non-Cancer TCGA-FP-7735-11A 3 In-Frame Inter-chr p13.1 126333 ChimerSeq FusionScan TCGA RNA-Seq NCOR2-UBC NCOR2 chr12 125051853 - UBC chr12 125398320 - Exonic hg19 Non-Cancer TCGA-FP-7735-11A 2 5'UTR-5'UTR Inter-chr q24.31 126334 ChimerSeq FusionScan TCGA RNA-Seq SNAP91-PICALM SNAP91 chr6 84417516 - PICALM chr11 85742653 - Exonic hg19 Non-Cancer TCGA-FP-7735-11A 2 In-Frame Inter-chr q14.2 126335 ChimerSeq FusionScan TCGA RNA-Seq MYH11-MYH14 MYH11 chr16 15876241 - MYH14 chr19 50730159 + Exonic hg19 Non-Cancer TCGA-FP-7735-11A 2 In-Frame Inter-chr Oncogene 126336 ChimerSeq FusionScan TCGA RNA-Seq MYH11-NDE1 MYH11 chr16 15818017 - NDE1 chr16 15818047 + Exonic hg19 Non-Cancer TCGA-FP-7735-11A 2 Out-of-Frame Inter-chr Oncogene 126337 ChimerSeq FusionScan TCGA RNA-Seq FAM18B1-FAM18B2-CDRT4 FAM18B1 chr17 18707579 + FAM18B2-CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer TCGA-BR-6458-11A 2 CDS-3'UTR Inter-chr 126338 ChimerSeq FusionScan TCGA RNA-Seq WRB-SH3BGR WRB chr21 40763762 + SH3BGR chr21 40834300 + Exonic hg19 Non-Cancer TCGA-KN-8422-11A 2 In-Frame Inter-chr q22.2 126339 ChimerSeq FusionScan TCGA RNA-Seq CPSF6-RBM39 CPSF6 chr12 69656342 + RBM39 chr20 34326939 - Exonic hg19 Non-Cancer TCGA-KN-8422-11A 2 3'UTR-3'UTR Inter-chr q15 126340 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-KN-8422-11A 2 3'UTR-3'UTR Inter-chr 126341 ChimerSeq FusionScan TCGA RNA-Seq ZNF562-EIF5 ZNF562 chr19 9771395 - EIF5 chr14 103803013 + Exonic hg19 Non-Cancer TCGA-KN-8437-11A 2 In-Frame Inter-chr Transcription factor p13.2 126342 ChimerSeq FusionScan TCGA RNA-Seq KLHDC2-C9orf3 KLHDC2 chr14 50249312 + C9orf3 chr9 97848963 + Exonic hg19 Non-Cancer TCGA-KO-8403-11A 2 CDS-3'UTR Inter-chr q21.3 126343 ChimerSeq FusionScan TCGA RNA-Seq WRB-SH3BGR WRB chr21 40763762 + SH3BGR chr21 40834300 + Exonic hg19 Non-Cancer TCGA-KL-8332-11A 2 In-Frame Inter-chr q22.2 126344 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-KL-8339-11A 2 3'UTR-3'UTR Inter-chr 126345 ChimerSeq FusionScan TCGA RNA-Seq BOD1L1-BOD1 BOD1L1 chr4 13628968 - BOD1 chr5 173035295 - Exonic hg19 Non-Cancer TCGA-KN-8432-11A 3 Out-of-Frame Inter-chr p15.33 126346 ChimerSeq FusionScan TCGA RNA-Seq TFG-GPR128 TFG chr3 100438902 + GPR128 chr3 100348441 + Exonic hg19 Non-Cancer TCGA-KN-8432-11A 3 In-Frame Inter-chr q12.2 126347 ChimerSeq FusionScan TCGA RNA-Seq PARP4-SFI1 PARP4 chr13 25058790 - SFI1 chr22 31952927 + Exonic hg19 Non-Cancer TCGA-KN-8434-11A 2 Out-of-Frame Inter-chr q12.12 126348 ChimerSeq FusionScan TCGA RNA-Seq MORC3-PTK2 MORC3 chr21 37717329 + PTK2 chr8 141685598 - Exonic hg19 Non-Cancer TCGA-KN-8434-11A 2 In-Frame Inter-chr q22.12 126349 ChimerSeq FusionScan TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171925 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-KN-8433-11A 2 3'UTR-3'UTR Inter-chr 126350 ChimerSeq FusionScan GSE122401 FAM18B1-FAM18B2-CDRT4 FAM18B1 chr17 18707579 + FAM18B2-CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer 115Nd 2 CDS-3'UTR Inter-chr 126351 ChimerSeq FusionScan GSE122401 GHRLOS-GHRL GHRLOS chr3 10327537 + GHRL chr3 10327578 - Exonic hg19 Non-Cancer 115Nd 2 5'UTR-CDS Inter-chr p25.3 126352 ChimerSeq FusionScan GSE122401 MGC2752-IL9R MGC2752 chr19 59086955 + IL9R chrY 59337948 + Exonic hg19 Non-Cancer 115Nd 2 5'UTR-5'UTR Inter-chr 126353 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60971741 + PGC chr6 41712252 - Exonic hg19 Non-Cancer 115Nd 6 In-Frame Inter-chr q12.2 126354 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60974099 + PGC chr6 41711127 - Exonic hg19 Non-Cancer 115Nd 19 In-Frame Inter-chr q12.2 126355 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60974099 + PGC chr6 41712252 - Exonic hg19 Non-Cancer 115Nd 2 Out-of-Frame Inter-chr q12.2 126356 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60975962 + PGC chr6 41708348 - Exonic hg19 Non-Cancer 115Nd 40 In-Frame Inter-chr q12.2 126357 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60978907 + PGC chr6 41704742 - Exonic hg19 Non-Cancer 115Nd 3 In-Frame Inter-chr q12.2 126358 ChimerSeq FusionScan GSE122401 PGA4-PGC PGA4 chr11 60990577 + PGC chr6 41705566 - Exonic hg19 Non-Cancer 115Nd 2 In-Frame Inter-chr q12.2 126359 ChimerSeq FusionScan GSE122401 PGA4-PGC PGA4 chr11 60990577 + PGC chr6 41712252 - Exonic hg19 Non-Cancer 115Nd 6 In-Frame Inter-chr q12.2 126360 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41704448 - PGA3 chr11 60980024 + Exonic hg19 Non-Cancer 115Nd 2 3'UTR-CDS Inter-chr p21.1 126361 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41705467 - PGA3 chr11 60974968 + Exonic hg19 Non-Cancer 115Nd 8 Out-of-Frame Inter-chr p21.1 126362 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41705467 - PGA3 chr11 60980024 + Exonic hg19 Non-Cancer 115Nd 13 In-Frame Inter-chr p21.1 126363 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41710027 - PGA3 chr11 60977313 + Exonic hg19 Non-Cancer 115Nd 33 In-Frame Inter-chr p21.1 126364 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41711008 - PGA3 chr11 60975762 + Exonic hg19 Non-Cancer 115Nd 15 In-Frame Inter-chr p21.1 126365 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41712134 - PGA3 chr11 60974968 + Exonic hg19 Non-Cancer 115Nd 22 In-Frame Inter-chr p21.1 126366 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41712395 - PGA3 chr11 60973981 + Exonic hg19 Non-Cancer 115Nd 16 In-Frame Inter-chr p21.1 126367 ChimerSeq FusionScan GSE122401 PGC-PGA4 PGC chr6 41710027 - PGA4 chr11 60996142 + Exonic hg19 Non-Cancer 115Nd 33 In-Frame Inter-chr p21.1 126368 ChimerSeq FusionScan GSE122401 PGC-PGA4 PGC chr6 41712134 - PGA4 chr11 60993797 + Exonic hg19 Non-Cancer 115Nd 22 In-Frame Inter-chr p21.1 126369 ChimerSeq FusionScan GSE122401 PGC-PGA5 PGC chr6 41710027 - PGA5 chr11 61015890 + Exonic hg19 Non-Cancer 115Nd 26 In-Frame Inter-chr p21.1 126370 ChimerSeq FusionScan GSE122401 PRH1-PRR4-PRR4 PRH1-PRR4 chr12 11126253 - PRR4 chr12 11001006 - Exonic hg19 Non-Cancer 115Nd 3 5'UTR-CDS Inter-chr 126371 ChimerSeq FusionScan GSE122401 UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer 115Nd 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126372 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60971741 + PGC chr6 41705566 - Exonic hg19 Non-Cancer 117Nd 2 In-Frame Inter-chr q12.2 126373 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60974099 + PGC chr6 41711127 - Exonic hg19 Non-Cancer 117Nd 22 In-Frame Inter-chr q12.2 126374 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60975962 + PGC chr6 41708348 - Exonic hg19 Non-Cancer 117Nd 34 In-Frame Inter-chr q12.2 126375 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60978907 + PGC chr6 41711127 - Exonic hg19 Non-Cancer 117Nd 2 Out-of-Frame Inter-chr q12.2 126376 ChimerSeq FusionScan GSE122401 PGA4-PGC PGA4 chr11 60990577 + PGC chr6 41712252 - Exonic hg19 Non-Cancer 117Nd 3 In-Frame Inter-chr q12.2 126377 ChimerSeq FusionScan GSE122401 PGA5-PGC PGA5 chr11 61011754 + PGC chr6 41711127 - Exonic hg19 Non-Cancer 117Nd 22 In-Frame Inter-chr q12.2 126378 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41705467 - PGA3 chr11 60980024 + Exonic hg19 Non-Cancer 117Nd 3 In-Frame Inter-chr p21.1 126379 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41710027 - PGA3 chr11 60977313 + Exonic hg19 Non-Cancer 117Nd 27 In-Frame Inter-chr p21.1 126380 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41712134 - PGA3 chr11 60974968 + Exonic hg19 Non-Cancer 117Nd 18 In-Frame Inter-chr p21.1 126381 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41712395 - PGA3 chr11 60973981 + Exonic hg19 Non-Cancer 117Nd 9 In-Frame Inter-chr p21.1 126382 ChimerSeq FusionScan GSE122401 PGC-PGA5 PGC chr6 41710027 - PGA5 chr11 61015890 + Exonic hg19 Non-Cancer 117Nd 27 In-Frame Inter-chr p21.1 126383 ChimerSeq FusionScan GSE122401 UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer 117Nd 6 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126384 ChimerSeq FusionScan GSE122401 DNAJC25-GNG10-UGCG DNAJC25-GNG10 chr9 114429226 + UGCG chr9 114676884 + Exonic hg19 Non-Cancer 119Nd 2 Out-of-Frame Inter-chr q31.3 126385 ChimerSeq FusionScan GSE122401 GHRLOS-GHRL GHRLOS chr3 10327537 + GHRL chr3 10327578 - Exonic hg19 Non-Cancer 119Nd 2 5'UTR-CDS Inter-chr p25.3 126386 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60971741 + PGC chr6 41712252 - Exonic hg19 Non-Cancer 119Nd 4 In-Frame Inter-chr q12.2 126387 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60974099 + PGC chr6 41711127 - Exonic hg19 Non-Cancer 119Nd 2 In-Frame Inter-chr q12.2 126388 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60975962 + PGC chr6 41708348 - Exonic hg19 Non-Cancer 119Nd 14 In-Frame Inter-chr q12.2 126389 ChimerSeq FusionScan GSE122401 PGA4-PGC PGA4 chr11 60990577 + PGC chr6 41712252 - Exonic hg19 Non-Cancer 119Nd 3 In-Frame Inter-chr q12.2 126390 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41705467 - PGA3 chr11 60980024 + Exonic hg19 Non-Cancer 119Nd 2 In-Frame Inter-chr p21.1 126391 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41710027 - PGA3 chr11 60977313 + Exonic hg19 Non-Cancer 119Nd 11 In-Frame Inter-chr p21.1 126392 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41712134 - PGA3 chr11 60974968 + Exonic hg19 Non-Cancer 119Nd 8 In-Frame Inter-chr p21.1 126393 ChimerSeq FusionScan GSE122401 PGC-PGA4 PGC chr6 41710027 - PGA4 chr11 60996142 + Exonic hg19 Non-Cancer 119Nd 9 In-Frame Inter-chr p21.1 126394 ChimerSeq FusionScan GSE122401 PGC-PGA5 PGC chr6 41710027 - PGA5 chr11 61015890 + Exonic hg19 Non-Cancer 119Nd 11 In-Frame Inter-chr p21.1 126395 ChimerSeq FusionScan GSE122401 UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer 119Nd 3 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126396 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60971741 + PGC chr6 41712252 - Exonic hg19 Non-Cancer 123Nd 6 In-Frame Inter-chr q12.2 126397 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60974099 + PGC chr6 41711127 - Exonic hg19 Non-Cancer 123Nd 7 In-Frame Inter-chr q12.2 126398 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60975962 + PGC chr6 41708348 - Exonic hg19 Non-Cancer 123Nd 23 In-Frame Inter-chr q12.2 126399 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60978907 + PGC chr6 41704742 - Exonic hg19 Non-Cancer 123Nd 3 In-Frame Inter-chr q12.2 126400 ChimerSeq FusionScan GSE122401 PGA4-PGC PGA4 chr11 60990577 + PGC chr6 41705566 - Exonic hg19 Non-Cancer 123Nd 2 In-Frame Inter-chr q12.2 126401 ChimerSeq FusionScan GSE122401 PGA4-PGC PGA4 chr11 60990577 + PGC chr6 41712252 - Exonic hg19 Non-Cancer 123Nd 6 In-Frame Inter-chr q12.2 126402 ChimerSeq FusionScan GSE122401 PGA4-PGC PGA4 chr11 60994791 + PGC chr6 41708348 - Exonic hg19 Non-Cancer 123Nd 23 In-Frame Inter-chr q12.2 126403 ChimerSeq FusionScan GSE122401 PGA5-PGC PGA5 chr11 61009403 + PGC chr6 41712252 - Exonic hg19 Non-Cancer 123Nd 6 In-Frame Inter-chr q12.2 126404 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41705467 - PGA3 chr11 60974968 + Exonic hg19 Non-Cancer 123Nd 3 Out-of-Frame Inter-chr p21.1 126405 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41710027 - PGA3 chr11 60977313 + Exonic hg19 Non-Cancer 123Nd 9 In-Frame Inter-chr p21.1 126406 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41712134 - PGA3 chr11 60974968 + Exonic hg19 Non-Cancer 123Nd 9 In-Frame Inter-chr p21.1 126407 ChimerSeq FusionScan GSE122401 PRH1-PRR4-PRR4 PRH1-PRR4 chr12 11126253 - PRR4 chr12 11001006 - Exonic hg19 Non-Cancer 123Nd 3 5'UTR-CDS Inter-chr 126408 ChimerSeq FusionScan GSE122401 PTPN6-PEX5 PTPN6 chr12 7055902 + PEX5 chr12 7354346 + Exonic hg19 Non-Cancer 123Nd 2 In-Frame Inter-chr Tumor suppressor gene p13.31 126409 ChimerSeq FusionScan GSE122401 SLC5A3-MRPS6 SLC5A3 chr21 35446045 + MRPS6 chr21 35514707 + Exonic hg19 Non-Cancer 123Nd 2 5'UTR-CDS Inter-chr q22.11 126410 ChimerSeq FusionScan GSE122401 SSR1-HADH SSR1 chr6 7310149 - HADH chr4 108944629 + Exonic hg19 Non-Cancer 123Nd 2 In-Frame Inter-chr p24.3 126411 ChimerSeq FusionScan GSE122401 UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer 123Nd 4 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126412 ChimerSeq FusionScan GSE122401 ZNF71-ZNF382 ZNF71 chr19 57112959 + ZNF382 chr19 37100828 + Exonic hg19 Non-Cancer 123Nd 2 5'UTR-CDS Inter-chr Transcription factor q13.43 Tumor suppressor gene Transcription factor 126413 ChimerSeq FusionScan GSE122401 ACP6-ATP4A ACP6 chr1 147120047 - ATP4A chr19 36042482 - Exonic hg19 Non-Cancer 131Nd 32 In-Frame Inter-chr q21.2 126414 ChimerSeq FusionScan GSE122401 ALDH2-PGA3 ALDH2 chr12 112241777 + PGA3 chr11 60970983 + Exonic hg19 Non-Cancer 131Nd 2 CDS-5'UTR Inter-chr q24.12 126415 ChimerSeq FusionScan GSE122401 ATMIN-CAPN8 ATMIN chr16 81069811 + CAPN8 chr1 223718212 - Exonic hg19 Non-Cancer 131Nd 2 In-Frame Inter-chr Tumor suppressor gene Transcription factor q23.2 126416 ChimerSeq FusionScan GSE122401 BTN3A3-BTN3A1 BTN3A3 chr6 26450361 + BTN3A1 chr6 26412639 + Exonic hg19 Non-Cancer 131Nd 6 In-Frame Inter-chr p22.2 126417 ChimerSeq FusionScan GSE122401 CA2-PGA5 CA2 chr8 86388089 + PGA5 chr11 61018603 + Exonic hg19 Non-Cancer 131Nd 4 In-Frame Inter-chr q21.2 126418 ChimerSeq FusionScan GSE122401 CAP1-SEC62 CAP1 chr1 40535546 + SEC62 chr3 169693395 + Exonic hg19 Non-Cancer 131Nd 2 In-Frame Inter-chr p34.2 126419 ChimerSeq FusionScan GSE122401 CAPN1-GNB2L1 CAPN1 chr11 64956217 + GNB2L1 chr5 180669345 - Exonic hg19 Non-Cancer 131Nd 2 In-Frame Inter-chr q13.1 Tumor suppressor gene 126420 ChimerSeq FusionScan GSE122401 DDI2-PLEKHM2 DDI2 chr1 15978390 + PLEKHM2 chr1 16042731 + Exonic hg19 Non-Cancer 131Nd 2 Out-of-Frame Inter-chr p36.21 126421 ChimerSeq FusionScan GSE122401 ETFDH-TSC22D3 ETFDH chr4 159601759 + TSC22D3 chrX 106957979 - Exonic hg19 Non-Cancer 131Nd 2 Out-of-Frame Inter-chr q32.1 126422 ChimerSeq FusionScan GSE122401 NAP1L4-RGNEF NAP1L4 chr11 2972488 - RGNEF chr5 73207099 + Exonic hg19 Non-Cancer 131Nd 2 In-Frame Inter-chr 126423 ChimerSeq FusionScan GSE122401 NAPG-RCHY1 NAPG chr18 10526155 + RCHY1 chr4 76419389 - Exonic hg19 Non-Cancer 131Nd 2 In-Frame Inter-chr p11.22 Tumor suppressor gene 126424 ChimerSeq FusionScan GSE122401 NBPF3-NBPF15 NBPF3 chr1 21766841 + NBPF15 chr1 148560846 + Exonic hg19 Non-Cancer 131Nd 9 5'UTR-5'UTR Inter-chr p36.12 126425 ChimerSeq FusionScan GSE122401 NID1-C4orf22 NID1 chr1 236175220 - C4orf22 chr4 81884670 + Exonic hg19 Non-Cancer 131Nd 2 Out-of-Frame Inter-chr q42.3 126426 ChimerSeq FusionScan GSE122401 NOP56-GRSF1 NOP56 chr20 2634039 + GRSF1 chr4 71698990 - Exonic hg19 Non-Cancer 131Nd 4 In-Frame Inter-chr p13 126427 ChimerSeq FusionScan GSE122401 PAN3-DIAPH3 PAN3 chr13 28771483 + DIAPH3 chr13 60240980 - Exonic hg19 Non-Cancer 131Nd 2 Out-of-Frame Inter-chr q12.2 126428 ChimerSeq FusionScan GSE122401 PCBD2-ARMC2 PCBD2 chr5 134246156 + ARMC2 chr6 109249290 + Exonic hg19 Non-Cancer 131Nd 2 In-Frame Inter-chr q31.1 126429 ChimerSeq FusionScan GSE122401 PFDN5-CAPN2 PFDN5 chr12 53689423 + CAPN2 chr1 223949887 + Exonic hg19 Non-Cancer 131Nd 7 In-Frame Inter-chr q13.13 126430 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60971741 + PGC chr6 41712252 - Exonic hg19 Non-Cancer 131Nd 19 In-Frame Inter-chr q12.2 126431 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60974099 + PGC chr6 41711127 - Exonic hg19 Non-Cancer 131Nd 146 In-Frame Inter-chr q12.2 126432 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60975962 + PGC chr6 41708348 - Exonic hg19 Non-Cancer 131Nd 408 In-Frame Inter-chr q12.2 126433 ChimerSeq FusionScan GSE122401 PGA4-PGC PGA4 chr11 60990577 + PGC chr6 41705566 - Exonic hg19 Non-Cancer 131Nd 3 In-Frame Inter-chr q12.2 126434 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41710027 - PGA3 chr11 60977313 + Exonic hg19 Non-Cancer 131Nd 36 In-Frame Inter-chr p21.1 126435 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41712134 - PGA3 chr11 60974968 + Exonic hg19 Non-Cancer 131Nd 169 In-Frame Inter-chr p21.1 126436 ChimerSeq FusionScan GSE122401 PGC-PGA5 PGC chr6 41710027 - PGA5 chr11 61015890 + Exonic hg19 Non-Cancer 131Nd 23 In-Frame Inter-chr p21.1 126437 ChimerSeq FusionScan GSE122401 PHF12-METTL2A PHF12 chr17 27277082 - METTL2A chr17 60525061 + Exonic hg19 Non-Cancer 131Nd 2 Out-of-Frame Inter-chr q11.2 126438 ChimerSeq FusionScan GSE122401 PHF17-CNIH3 PHF17 chr4 129731032 + CNIH3 chr1 224868659 + Exonic hg19 Non-Cancer 131Nd 2 5'UTR-CDS Inter-chr 126439 ChimerSeq FusionScan GSE122401 PTOV1-TRIP10 PTOV1 chr19 50361371 + TRIP10 chr19 6746462 + Exonic hg19 Non-Cancer 131Nd 2 In-Frame Inter-chr q13.33 126440 ChimerSeq FusionScan GSE122401 PXMP2-PGA3 PXMP2 chr12 133277955 + PGA3 chr11 60980024 + Exonic hg19 Non-Cancer 131Nd 23 In-Frame Inter-chr q24.33 126441 ChimerSeq FusionScan GSE122401 RAD50-LIPF RAD50 chr5 131915194 + LIPF chr10 90429593 + Exonic hg19 Non-Cancer 131Nd 2 In-Frame Inter-chr Oncogene q31.1 126442 ChimerSeq FusionScan GSE122401 SNHG1-RPL11 SNHG1 chr11 62622895 - RPL11 chr1 24022287 + Exonic hg19 Non-Cancer 131Nd 2 3'UTR-CDS Inter-chr q12.3 Tumor suppressor gene 126443 ChimerSeq FusionScan GSE122401 SNX1-MTRF1 SNX1 chr15 64415745 + MTRF1 chr13 41835051 - Exonic hg19 Non-Cancer 131Nd 2 CDS-5'UTR Inter-chr q22.31 126444 ChimerSeq FusionScan GSE122401 TDG-SERPINB6 TDG chr12 104359838 + SERPINB6 chr6 2959576 - Exonic hg19 Non-Cancer 131Nd 2 CDS-5'UTR Inter-chr q23.3 126445 ChimerSeq FusionScan GSE122401 TMX2-PICALM TMX2 chr11 57505140 + PICALM chr11 85742653 - Exonic hg19 Non-Cancer 131Nd 2 In-Frame Inter-chr q12.1 126446 ChimerSeq FusionScan GSE122401 WRB-SH3BGR WRB chr21 40763762 + SH3BGR chr21 40834300 + Exonic hg19 Non-Cancer 131Nd 2 In-Frame Inter-chr q22.2 126447 ChimerSeq FusionScan GSE122401 ZMYND8-RHPN2 ZMYND8 chr20 45874751 - RHPN2 chr19 33535270 - Exonic hg19 Non-Cancer 131Nd 2 Out-of-Frame Inter-chr q13.12 126448 ChimerSeq FusionScan GSE122401 ZNF273-ZNF429 ZNF273 chr7 64377496 + ZNF429 chr19 21712459 + Exonic hg19 Non-Cancer 131Nd 8 5'UTR-CDS Inter-chr Transcription factor q11.21 Transcription factor 126449 ChimerSeq FusionScan GSE122401 ANAPC5-VDAC3 ANAPC5 chr12 121785604 - VDAC3 chr8 42260828 + Exonic hg19 Non-Cancer 135N 2 In-Frame Inter-chr q24.31 126450 ChimerSeq FusionScan GSE122401 APPL2-HNRNPH3 APPL2 chr12 105593150 - HNRNPH3 chr10 70098896 + Exonic hg19 Non-Cancer 135N 3 Out-of-Frame Inter-chr q23.3 126451 ChimerSeq FusionScan GSE122401 ARHGAP24-PPA2 ARHGAP24 chr4 86491874 + PPA2 chr4 106345479 - Exonic hg19 Non-Cancer 135N 2 In-Frame Inter-chr q21.23 126452 ChimerSeq FusionScan GSE122401 ARID5B-GDI2 ARID5B chr10 63662172 + GDI2 chr10 5842668 - Exonic hg19 Non-Cancer 135N 2 In-Frame Inter-chr Transcription factor q21.2 126453 ChimerSeq FusionScan GSE122401 ARMCX5-GPRASP2-GPRASP2 ARMCX5-GPRASP2 chrX 101860581 + GPRASP2 chrX 101969116 + Exonic hg19 Non-Cancer 135N 2 3'UTR-5'UTR Inter-chr q22.1 126454 ChimerSeq FusionScan GSE122401 ATF7IP-SCLT1 ATF7IP chr12 14518761 + SCLT1 chr4 129812292 - Exonic hg19 Non-Cancer 135N 3 5'UTR-CDS Inter-chr p13.1 126455 ChimerSeq FusionScan GSE122401 ATP11B-IVNS1ABP ATP11B chr3 182554258 + IVNS1ABP chr1 185270695 - Exonic hg19 Non-Cancer 135N 2 In-Frame Inter-chr Oncogene q26.33 126456 ChimerSeq FusionScan GSE122401 ATP6V0E1-CCDC72 ATP6V0E1 chr5 172410967 + CCDC72 chr3 48481812 + Exonic hg19 Non-Cancer 135N 5 Out-of-Frame Inter-chr q35.1 126457 ChimerSeq FusionScan GSE122401 ATPAF2-ATF7IP ATPAF2 chr17 17942194 - ATF7IP chr12 14576842 + Exonic hg19 Non-Cancer 135N 3 CDS-5'UTR Inter-chr p11.2 126458 ChimerSeq FusionScan GSE122401 C1orf9-VAV3 C1orf9 chr1 172502637 + VAV3 chr1 108247683 - Exonic hg19 Non-Cancer 135N 2 In-Frame Inter-chr 126459 ChimerSeq FusionScan GSE122401 CASC3-DNAJC7 CASC3 chr17 38297860 + DNAJC7 chr17 40135654 - Exonic hg19 Non-Cancer 135N 2 Out-of-Frame Inter-chr q21.1 126460 ChimerSeq FusionScan GSE122401 CASP7-MXI1 CASP7 chr10 115457362 + MXI1 chr10 111987946 + Exonic hg19 Non-Cancer 135N 5 Out-of-Frame Inter-chr q25.3 Tumor suppressor gene Transcription factor 126461 ChimerSeq FusionScan GSE122401 CCDC84-ITGA6 CCDC84 chr11 118869819 + ITGA6 chr2 173368818 + Exonic hg19 Non-Cancer 135N 2 Out-of-Frame Inter-chr 126462 ChimerSeq FusionScan GSE122401 CIAPIN1-AKR1C3 CIAPIN1 chr16 57481253 - AKR1C3 chr10 5141518 + Exonic hg19 Non-Cancer 135N 2 5'UTR-CDS Inter-chr q21 126463 ChimerSeq FusionScan GSE122401 CLYBL-ARGLU1 CLYBL chr13 100259011 + ARGLU1 chr13 107212005 - Exonic hg19 Non-Cancer 135N 3 In-Frame Inter-chr q32.3 126464 ChimerSeq FusionScan GSE122401 CUBN-EHF CUBN chr10 17061831 - EHF chr11 34678454 + Exonic hg19 Non-Cancer 135N 2 5'UTR-CDS Inter-chr p13 Tumor suppressor gene Transcription factor 126465 ChimerSeq FusionScan GSE122401 CUTC-PILRB CUTC chr10 101499526 + PILRB chr7 99947353 + Exonic hg19 Non-Cancer 135N 2 CDS-5'UTR Inter-chr q24.2 126466 ChimerSeq FusionScan GSE122401 DLEU2-TRIM13 DLEU2 chr13 50642232 - TRIM13 chr13 50586070 + Exonic hg19 Non-Cancer 135N 2 3'UTR-CDS Inter-chr Tumor suppressor gene q14.2 Tumor suppressor gene 126467 ChimerSeq FusionScan GSE122401 DNAJC25-GNG10-PTGR1 DNAJC25-GNG10 chr9 114394023 + PTGR1 chr9 114348445 - Exonic hg19 Non-Cancer 135N 2 5'UTR-5'UTR Inter-chr q31.3 126468 ChimerSeq FusionScan GSE122401 DNAJC25-GNG10-UGCG DNAJC25-GNG10 chr9 114429226 + UGCG chr9 114676884 + Exonic hg19 Non-Cancer 135N 3 Out-of-Frame Inter-chr q31.3 126469 ChimerSeq FusionScan GSE122401 DNAJC9-DENND5A DNAJC9 chr10 75003600 - DENND5A chr11 9173989 - Exonic hg19 Non-Cancer 135N 2 In-Frame Inter-chr q22.2 126470 ChimerSeq FusionScan GSE122401 FAM18B1-FAM18B2-CDRT4 FAM18B1 chr17 18707579 + FAM18B2-CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer 135N 11 CDS-3'UTR Inter-chr 126471 ChimerSeq FusionScan GSE122401 FAM48A-EPB41L5 FAM48A chr13 37598171 - EPB41L5 chr2 120776652 + Exonic hg19 Non-Cancer 135N 2 CDS-5'UTR Inter-chr 126472 ChimerSeq FusionScan GSE122401 FRYL-OCIAD1 FRYL chr4 48782094 - OCIAD1 chr4 48850415 + Exonic hg19 Non-Cancer 135N 2 5'UTR-CDS Inter-chr p11 126473 ChimerSeq FusionScan GSE122401 GKN2-NARF GKN2 chr2 69177257 - NARF chr17 80426639 + Exonic hg19 Non-Cancer 135N 12 In-Frame Inter-chr Tumor suppressor gene p13.3 126474 ChimerSeq FusionScan GSE122401 HMGCS2-PSMA2 HMGCS2 chr1 120298049 - PSMA2 chr7 42964396 - Exonic hg19 Non-Cancer 135N 2 In-Frame Inter-chr p12 126475 ChimerSeq FusionScan GSE122401 IKZF1-RPRD1A IKZF1 chr7 50344518 + RPRD1A chr18 33573263 - Exonic hg19 Non-Cancer 135N 2 5'UTR-CDS Inter-chr Oncogene Tumor suppressor gene Transcription factor p12.2 126476 ChimerSeq FusionScan GSE122401 IMMP1L-ELP4 IMMP1L chr11 31531065 - ELP4 chr11 31561208 + Exonic hg19 Non-Cancer 135N 2 5'UTR-CDS Inter-chr p13 126477 ChimerSeq FusionScan GSE122401 INADL-SNRNP48 INADL chr1 62579918 + SNRNP48 chr6 7601568 + Exonic hg19 Non-Cancer 135N 2 Out-of-Frame Inter-chr 126478 ChimerSeq FusionScan GSE122401 LEPROT-NFIA LEPROT chr1 65891061 + NFIA chr1 61798183 + Exonic hg19 Non-Cancer 135N 2 Out-of-Frame Inter-chr p31.3 Transcription factor 126479 ChimerSeq FusionScan GSE122401 LRP5-LRP1 LRP5 chr11 68115711 + LRP1 chr12 57592247 + Exonic hg19 Non-Cancer 135N 35 In-Frame Inter-chr q13.2 126480 ChimerSeq FusionScan GSE122401 MAPK10-MAPK8 MAPK10 chr4 87022204 - MAPK8 chr10 49632556 + Exonic hg19 Non-Cancer 135N 39 In-Frame Inter-chr Tumor suppressor gene q21.3 Oncogene 126481 ChimerSeq FusionScan GSE122401 NCKIPSD-RIMKLB NCKIPSD chr3 48719477 - RIMKLB chr12 8904552 + Exonic hg19 Non-Cancer 135N 2 In-Frame Inter-chr p21.31 126482 ChimerSeq FusionScan GSE122401 OPHN1-N4BP2L2 OPHN1 chrX 67652708 - N4BP2L2 chr13 33101669 - Exonic hg19 Non-Cancer 135N 2 In-Frame Inter-chr q12 126483 ChimerSeq FusionScan GSE122401 PAQR8-EFHC1 PAQR8 chr6 52227047 + EFHC1 chr6 52288743 + Exonic hg19 Non-Cancer 135N 3 5'UTR-5'UTR Inter-chr p12.2 126484 ChimerSeq FusionScan GSE122401 PDZD8-PDCD4 PDZD8 chr10 119078382 - PDCD4 chr10 112641032 + Exonic hg19 Non-Cancer 135N 2 Out-of-Frame Inter-chr q26.11 Tumor suppressor gene 126485 ChimerSeq FusionScan GSE122401 PHKB-ITFG1 PHKB chr16 47644831 + ITFG1 chr16 47347734 - Exonic hg19 Non-Cancer 135N 2 Out-of-Frame Inter-chr q12.1 126486 ChimerSeq FusionScan GSE122401 PITPNM1-PITPNM2 PITPNM1 chr11 67269974 - PITPNM2 chr12 123497281 - Exonic hg19 Non-Cancer 135N 41 In-Frame Inter-chr q13.2 126487 ChimerSeq FusionScan GSE122401 PLXNB1-PLXNB3 PLXNB1 chr3 48450978 - PLXNB3 chrX 153043402 + Exonic hg19 Non-Cancer 135N 18 In-Frame Inter-chr p21.31 126488 ChimerSeq FusionScan GSE122401 PPIL6-REPS1 PPIL6 chr6 109752359 - REPS1 chr6 139226269 - Exonic hg19 Non-Cancer 135N 2 In-Frame Inter-chr q21 126489 ChimerSeq FusionScan GSE122401 PTGDS-UBE2I PTGDS chr9 139872144 + UBE2I chr16 1364293 + Exonic hg19 Non-Cancer 135N 2 In-Frame Inter-chr q34.3 126490 ChimerSeq FusionScan GSE122401 PTPRK-BCKDHB PTPRK chr6 128718710 - BCKDHB chr6 80837263 + Exonic hg19 Non-Cancer 135N 3 In-Frame Inter-chr Tumor suppressor gene 126491 ChimerSeq FusionScan GSE122401 PTPRN2-C5orf30 PTPRN2 chr7 157691364 - C5orf30 chr5 102601608 + Exonic hg19 Non-Cancer 135N 2 CDS-5'UTR Inter-chr q36.3 126492 ChimerSeq FusionScan GSE122401 RABGAP1-CDS2 RABGAP1 chr9 125839041 + CDS2 chr20 5170380 + Exonic hg19 Non-Cancer 135N 6 In-Frame Inter-chr q33.2 126493 ChimerSeq FusionScan GSE122401 RSRC2-C6orf72 RSRC2 chr12 123011394 - C6orf72 chr6 149900969 + Exonic hg19 Non-Cancer 135N 3 In-Frame Inter-chr q24.31 126494 ChimerSeq FusionScan GSE122401 RUFY3-PTK2 RUFY3 chr4 71660611 + PTK2 chr8 141889736 - Exonic hg19 Non-Cancer 135N 2 In-Frame Inter-chr q13.3 126495 ChimerSeq FusionScan GSE122401 SDC4-NECAB3 SDC4 chr20 43976964 - NECAB3 chr20 32248201 - Exonic hg19 Non-Cancer 135N 3 In-Frame Inter-chr q13.12 126496 ChimerSeq FusionScan GSE122401 SEP15-SEC31A 2019_ 9_ 15_ chr1 87379710 - SEC31A chr4 83748785 - Exonic hg19 Non-Cancer 135N 2 In-Frame Inter-chr 126497 ChimerSeq FusionScan GSE122401 SEPT10-MYH14 SEPT10 chr2 110350627 - MYH14 chr19 50783293 + Exonic hg19 Non-Cancer 135N 2 In-Frame Inter-chr q13 126498 ChimerSeq FusionScan GSE122401 SLC25A13-ERBB2IP SLC25A13 chr7 95906507 - ERBB2IP chr5 65307876 + Exonic hg19 Non-Cancer 135N 2 Out-of-Frame Inter-chr q21.3 126499 ChimerSeq FusionScan GSE122401 SLC38A2-CTBP1 SLC38A2 chr12 46766291 - CTBP1 chr4 1235307 - Exonic hg19 Non-Cancer 135N 4 5'UTR-5'UTR Inter-chr q13.11 126500 ChimerSeq FusionScan GSE122401 SRSF11-SYK SRSF11 chr1 70671463 + SYK chr9 93606139 + Exonic hg19 Non-Cancer 135N 4 5'UTR-5'UTR Inter-chr p31.1 TK:Syk Oncogene Tumor suppressor gene 126501 ChimerSeq FusionScan GSE122401 STK3-MTDH STK3 chr8 99718694 - MTDH chr8 98673299 + Exonic hg19 Non-Cancer 135N 3 In-Frame Inter-chr q22.2 126502 ChimerSeq FusionScan GSE122401 STX11-PEX7 STX11 chr6 144471840 + PEX7 chr6 137219279 + Exonic hg19 Non-Cancer 135N 2 5'UTR-CDS Inter-chr q24.2 126503 ChimerSeq FusionScan GSE122401 SUPV3L1-NAAA SUPV3L1 chr10 70956839 + NAAA chr4 76835491 - Exonic hg19 Non-Cancer 135N 3 CDS-3'UTR Inter-chr q22.1 126504 ChimerSeq FusionScan GSE122401 TET2-PPA2 TET2 chr4 106068136 + PPA2 chr4 106370560 - Exonic hg19 Non-Cancer 135N 2 5'UTR-CDS Inter-chr Oncogene Tumor suppressor gene Transcription factor q24 126505 ChimerSeq FusionScan GSE122401 TMEM132B-CCT5 TMEM132B chr12 126137178 + CCT5 chr5 10260903 + Exonic hg19 Non-Cancer 135N 3 In-Frame Inter-chr q24.31 126506 ChimerSeq FusionScan GSE122401 TRAF2-C9orf86 TRAF2 chr9 139804446 + C9orf86 chr9 139730193 + Exonic hg19 Non-Cancer 135N 2 In-Frame Inter-chr Tumor suppressor gene q34.3 126507 ChimerSeq FusionScan GSE122401 TRRAP-IRF3 TRRAP chr7 98569568 + IRF3 chr19 50166771 - Exonic hg19 Non-Cancer 135N 4 In-Frame Inter-chr Atypical:PIKK Oncogene q22.1 Tumor suppressor gene Transcription factor 126508 ChimerSeq FusionScan GSE122401 TTC14-C21orf91 TTC14 chr3 180325553 + C21orf91 chr21 19190642 - Exonic hg19 Non-Cancer 135N 4 CDS-5'UTR Inter-chr q26.33 126509 ChimerSeq FusionScan GSE122401 TYW5-CYP3A5 TYW5 chr2 200820115 - CYP3A5 chr7 99261718 - Exonic hg19 Non-Cancer 135N 2 Out-of-Frame Inter-chr q33.1 126510 ChimerSeq FusionScan GSE122401 WDR60-BPHL WDR60 chr7 158649441 + BPHL chr6 3138274 + Exonic hg19 Non-Cancer 135N 2 CDS-5'UTR Inter-chr q36.3 126511 ChimerSeq FusionScan GSE122401 ZNF417-ZNF587B ZNF417 chr19 58427746 - ZNF587B chr19 58350390 + Exonic hg19 Non-Cancer 135N 22 In-Frame Inter-chr Transcription factor q13.43 Transcription factor 126512 ChimerSeq FusionScan GSE122401 ZNF71-ZNF382 ZNF71 chr19 57112959 + ZNF382 chr19 37100828 + Exonic hg19 Non-Cancer 135N 4 5'UTR-CDS Inter-chr Transcription factor q13.43 Tumor suppressor gene Transcription factor 126513 ChimerSeq FusionScan GSE122401 ZZZ3-PIGK ZZZ3 chr1 78148269 - PIGK chr1 77632515 - Exonic hg19 Non-Cancer 135N 2 5'UTR-CDS Inter-chr Transcription factor p31.1 126514 ChimerSeq FusionScan GSE122401 HACL1-COLQ HACL1 chr3 15604864 - COLQ chr3 15531144 - Exonic hg19 Non-Cancer 137N 2 Out-of-Frame Inter-chr p25.1 126515 ChimerSeq FusionScan GSE122401 KSR1-LGALS9C KSR1 chr17 25944454 + LGALS9C chr17 18387188 + Exonic hg19 Non-Cancer 137N 2 Out-of-Frame Inter-chr TKL:RAF q11.2 126516 ChimerSeq FusionScan GSE122401 MATR3-CTNNA1 MATR3 chr5 138629494 + CTNNA1 chr5 138221900 + Exonic hg19 Non-Cancer 137N 2 5'UTR-CDS Inter-chr q31.2 Oncogene 126517 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41712395 - PGA3 chr11 60973981 + Exonic hg19 Non-Cancer 137N 2 In-Frame Inter-chr p21.1 126518 ChimerSeq FusionScan GSE122401 RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer 137N 2 Out-of-Frame Inter-chr q13.2 126519 ChimerSeq FusionScan GSE122401 SOCS5-PALLD SOCS5 chr2 46926588 + PALLD chr4 169812072 + Exonic hg19 Non-Cancer 137N 2 5'UTR-CDS Inter-chr p21 126520 ChimerSeq FusionScan GSE122401 STAG3-PILRB STAG3 chr7 99811429 + PILRB chr7 99943487 + Exonic hg19 Non-Cancer 137N 2 CDS-5'UTR Inter-chr q22.1 126521 ChimerSeq FusionScan GSE122401 SUN1-N4BP2L2 SUN1 chr7 896038 + N4BP2L2 chr13 33101669 - Exonic hg19 Non-Cancer 137N 2 In-Frame Inter-chr p22.3 126522 ChimerSeq FusionScan GSE122401 TMEM8A-UBC TMEM8A chr16 431700 - UBC chr12 125398320 - Exonic hg19 Non-Cancer 137N 2 CDS-5'UTR Inter-chr p13.3 126523 ChimerSeq FusionScan GSE122401 ZNF525-ZNF761 ZNF525 chr19 53869012 + ZNF761 chr19 53950448 + Exonic hg19 Non-Cancer 137N 2 5'UTR-5'UTR Inter-chr Transcription factor q13.42 Transcription factor 126524 ChimerSeq FusionScan GSE122401 BTN3A3-BTN3A1 BTN3A3 chr6 26450361 + BTN3A1 chr6 26412639 + Exonic hg19 Non-Cancer 139N 2 In-Frame Inter-chr p22.2 126525 ChimerSeq FusionScan GSE122401 ETV6-RNF128 ETV6 chr12 11803094 + RNF128 chrX 106016142 + Exonic hg19 Non-Cancer 139N 2 Out-of-Frame Inter-chr Tumor suppressor gene Transcription factor p13.2 126526 ChimerSeq FusionScan GSE122401 FAM18B1-FAM18B2-CDRT4 FAM18B1 chr17 18707579 + FAM18B2-CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer 139N 2 CDS-3'UTR Inter-chr 126527 ChimerSeq FusionScan GSE122401 PGA3-CTSE PGA3 chr11 60971741 + CTSE chr1 206319100 + Exonic hg19 Non-Cancer 139N 3 In-Frame Inter-chr q12.2 126528 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60971741 + PGC chr6 41712252 - Exonic hg19 Non-Cancer 139N 5 In-Frame Inter-chr q12.2 126529 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60975962 + PGC chr6 41708348 - Exonic hg19 Non-Cancer 139N 13 In-Frame Inter-chr q12.2 126530 ChimerSeq FusionScan GSE122401 PGA4-CTSE PGA4 chr11 60990577 + CTSE chr1 206319100 + Exonic hg19 Non-Cancer 139N 3 In-Frame Inter-chr q12.2 126531 ChimerSeq FusionScan GSE122401 PGA4-PGC PGA4 chr11 60994791 + PGC chr6 41708348 - Exonic hg19 Non-Cancer 139N 13 In-Frame Inter-chr q12.2 126532 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41705467 - PGA3 chr11 60974968 + Exonic hg19 Non-Cancer 139N 4 Out-of-Frame Inter-chr p21.1 126533 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41710027 - PGA3 chr11 60977313 + Exonic hg19 Non-Cancer 139N 9 In-Frame Inter-chr p21.1 126534 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41712134 - PGA3 chr11 60974968 + Exonic hg19 Non-Cancer 139N 7 In-Frame Inter-chr p21.1 126535 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41712395 - PGA3 chr11 60973981 + Exonic hg19 Non-Cancer 139N 3 In-Frame Inter-chr p21.1 126536 ChimerSeq FusionScan GSE122401 PGC-PGA4 PGC chr6 41712134 - PGA4 chr11 60993797 + Exonic hg19 Non-Cancer 139N 7 In-Frame Inter-chr p21.1 126537 ChimerSeq FusionScan GSE122401 ACTN4-ACTN1 ACTN4 chr19 39195660 + ACTN1 chr14 69376759 - Exonic hg19 Non-Cancer 13N 44 In-Frame Inter-chr 126538 ChimerSeq FusionScan GSE122401 ANKRD36-HNRNPH1 ANKRD36 chr2 97860654 + HNRNPH1 chr5 179045324 - Exonic hg19 Non-Cancer 13N 2 Out-of-Frame Inter-chr q11.2 126539 ChimerSeq FusionScan GSE122401 ATG16L1-SMG9 ATG16L1 chr2 234164841 + SMG9 chr19 44254899 - Exonic hg19 Non-Cancer 13N 2 5'UTR-5'UTR Inter-chr 126540 ChimerSeq FusionScan GSE122401 ATP1A1-ATP1A3 ATP1A1 chr1 116939356 + ATP1A3 chr19 42480718 - Exonic hg19 Non-Cancer 13N 121 In-Frame Inter-chr p13.1 126541 ChimerSeq FusionScan GSE122401 BSG-PPP1R12C BSG chr19 571579 + PPP1R12C chr19 55607703 - Exonic hg19 Non-Cancer 13N 2 Out-of-Frame Inter-chr p13.3 126542 ChimerSeq FusionScan GSE122401 BTN3A3-BTN3A1 BTN3A3 chr6 26450361 + BTN3A1 chr6 26412639 + Exonic hg19 Non-Cancer 13N 6 In-Frame Inter-chr p22.2 126543 ChimerSeq FusionScan GSE122401 C12orf51-AKIRIN1 C12orf51 chr12 112641439 - AKIRIN1 chr1 39463842 + Exonic hg19 Non-Cancer 13N 2 Out-of-Frame Inter-chr 126544 ChimerSeq FusionScan GSE122401 C2orf70-CNOT10 C2orf70 chr2 26785554 + CNOT10 chr3 32800949 + Exonic hg19 Non-Cancer 13N 2 In-Frame Inter-chr p23.3 126545 ChimerSeq FusionScan GSE122401 CEP192-SYNJ1 CEP192 chr18 13117642 + SYNJ1 chr21 34074357 - Exonic hg19 Non-Cancer 13N 2 Out-of-Frame Inter-chr p11.21 126546 ChimerSeq FusionScan GSE122401 COL4A5-ARPC4 COL4A5 chrX 107840798 + ARPC4 chr3 9845526 + Exonic hg19 Non-Cancer 13N 2 In-Frame Inter-chr q22.3 126547 ChimerSeq FusionScan GSE122401 EFCAB11-TDP1 EFCAB11 chr14 90397884 - TDP1 chr14 90509413 + Exonic hg19 Non-Cancer 13N 2 Out-of-Frame Inter-chr q32.11 126548 ChimerSeq FusionScan GSE122401 FAM83E-C1orf86 FAM83E chr19 49113132 - C1orf86 chr1 2125572 - Exonic hg19 Non-Cancer 13N 2 In-Frame Inter-chr q13.33 126549 ChimerSeq FusionScan GSE122401 FKBP14-EIF4A1 FKBP14 chr7 30062280 - EIF4A1 chr17 7478436 + Exonic hg19 Non-Cancer 13N 2 In-Frame Inter-chr p14.3 126550 ChimerSeq FusionScan GSE122401 GKN2-GKN1 GKN2 chr2 69179981 - GKN1 chr2 69204626 + Exonic hg19 Non-Cancer 13N 17 In-Frame Inter-chr Tumor suppressor gene p13.3 Tumor suppressor gene 126551 ChimerSeq FusionScan GSE122401 HLA-F-AS1-MICA HLA-F-AS1 chr6 29716676 - MICA chr6 31378319 + Exonic hg19 Non-Cancer 13N 3 Out-of-Frame Inter-chr 126552 ChimerSeq FusionScan GSE122401 IGSF9B-ECHDC2 IGSF9B chr11 133826585 - ECHDC2 chr1 53377462 - Exonic hg19 Non-Cancer 13N 3 In-Frame Inter-chr q25 126553 ChimerSeq FusionScan GSE122401 MGC2752-IL9R MGC2752 chr19 59086955 + IL9R chrY 59337948 + Exonic hg19 Non-Cancer 13N 3 5'UTR-5'UTR Inter-chr 126554 ChimerSeq FusionScan GSE122401 NLGN4Y-NLGN4X NLGN4Y chrY 16635452 + NLGN4X chrX 6069812 - Exonic hg19 Non-Cancer 13N 2 5'UTR-5'UTR Inter-chr q11.221 126555 ChimerSeq FusionScan GSE122401 PIP4K2A-ARHGAP21 PIP4K2A chr10 23003111 - ARHGAP21 chr10 24910298 - Exonic hg19 Non-Cancer 13N 2 In-Frame Inter-chr p12.2 126556 ChimerSeq FusionScan GSE122401 TFEB-PGC TFEB chr6 41654831 - PGC chr6 41712546 - Exonic hg19 Non-Cancer 13N 2 In-Frame Inter-chr Transcription factor p21.1 126557 ChimerSeq FusionScan GSE122401 TRPM4-RPL37A TRPM4 chr19 49669472 + RPL37A chr2 217363992 + Exonic hg19 Non-Cancer 13N 2 In-Frame Inter-chr q13.33 126558 ChimerSeq FusionScan GSE122401 UBE2Q1-UBE2Q2 UBE2Q1 chr1 154524246 - UBE2Q2 chr15 76183259 + Exonic hg19 Non-Cancer 13N 42 In-Frame Inter-chr q21.3 126559 ChimerSeq FusionScan GSE122401 UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer 13N 7 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126560 ChimerSeq FusionScan GSE122401 ZFP36-PSMB1 ZFP36 chr19 39897568 + PSMB1 chr6 170858201 - Exonic hg19 Non-Cancer 13N 2 Out-of-Frame Inter-chr Tumor suppressor gene q13.2 126561 ChimerSeq FusionScan GSE122401 EIF4E3-FOXP1 EIF4E3 chr3 71739160 - FOXP1 chr3 71542706 - Exonic hg19 Non-Cancer 143N 2 CDS-5'UTR Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor 126562 ChimerSeq FusionScan GSE122401 LENG8-LAIR2 LENG8 chr19 54963931 + LAIR2 chr19 55021735 + Exonic hg19 Non-Cancer 143N 2 Out-of-Frame Inter-chr 126563 ChimerSeq FusionScan GSE122401 STK24-PDCD6 STK24 chr13 99228998 - PDCD6 chr5 311407 + Exonic hg19 Non-Cancer 143N 2 Out-of-Frame Inter-chr q32.2 126564 ChimerSeq FusionScan GSE122401 TMED6-IST1 TMED6 chr16 69385443 - IST1 chr16 71956376 + Exonic hg19 Non-Cancer 143N 2 In-Frame Inter-chr q22.1 126565 ChimerSeq FusionScan GSE122401 UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer 143N 2 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126566 ChimerSeq FusionScan GSE122401 ANKRD44-TTLL5 ANKRD44 chr2 198175301 - TTLL5 chr14 76286349 + Exonic hg19 Non-Cancer 145N 2 In-Frame Inter-chr q33.1 126567 ChimerSeq FusionScan GSE122401 CBX4-IMPA2 CBX4 chr17 77812809 - IMPA2 chr18 12014263 + Exonic hg19 Non-Cancer 145N 2 Out-of-Frame Inter-chr q25.3 126568 ChimerSeq FusionScan GSE122401 GKN1-GKN2 GKN1 chr2 69201821 + GKN2 chr2 69177887 - Exonic hg19 Non-Cancer 145N 15 In-Frame Inter-chr Tumor suppressor gene p13.3 Tumor suppressor gene 126569 ChimerSeq FusionScan GSE122401 INPP5A-KRT19 INPP5A chr10 134523960 + KRT19 chr17 39681525 - Exonic hg19 Non-Cancer 145N 2 Out-of-Frame Inter-chr q26.3 Tumor suppressor gene 126570 ChimerSeq FusionScan GSE122401 ITGA9-SMOC2 ITGA9 chr3 37584076 + SMOC2 chr6 168910594 + Exonic hg19 Non-Cancer 145N 2 In-Frame Inter-chr Oncogene p22.2 126571 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60975962 + PGC chr6 41708348 - Exonic hg19 Non-Cancer 145N 159 In-Frame Inter-chr q12.2 126572 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41712134 - PGA3 chr11 60974968 + Exonic hg19 Non-Cancer 145N 44 In-Frame Inter-chr p21.1 126573 ChimerSeq FusionScan GSE122401 PLK1S1-CCNI PLK1S1 chr20 21117193 + CCNI chr4 77976533 - Exonic hg19 Non-Cancer 145N 3 In-Frame Inter-chr 126574 ChimerSeq FusionScan GSE122401 PTPRC-BCAS3 PTPRC chr1 198608471 + BCAS3 chr17 59469337 + Exonic hg19 Non-Cancer 145N 3 In-Frame Inter-chr Tumor suppressor gene 126575 ChimerSeq FusionScan GSE122401 RAB7A-CIDEC RAB7A chr3 128526514 + CIDEC chr3 9912006 - Exonic hg19 Non-Cancer 145N 2 In-Frame Inter-chr Tumor suppressor gene q21.3 126576 ChimerSeq FusionScan GSE122401 UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer 145N 6 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126577 ChimerSeq FusionScan GSE122401 WRB-SH3BGR WRB chr21 40763762 + SH3BGR chr21 40834300 + Exonic hg19 Non-Cancer 145N 2 In-Frame Inter-chr q22.2 126578 ChimerSeq FusionScan GSE122401 ZBTB1-PPP1R36 ZBTB1 chr14 64971664 + PPP1R36 chr14 65031468 + Exonic hg19 Non-Cancer 145N 3 5'UTR-CDS Inter-chr Transcription factor q23.3 126579 ChimerSeq FusionScan GSE122401 ZFAND3-ATG12 ZFAND3 chr6 37897775 + ATG12 chr5 115173461 - Exonic hg19 Non-Cancer 145N 2 In-Frame Inter-chr p21.2 126580 ChimerSeq FusionScan GSE122401 ZNF133-GNAS ZNF133 chr20 18269248 + GNAS chr20 57470666 + Exonic hg19 Non-Cancer 145N 2 5'UTR-5'UTR Inter-chr Transcription factor p11.23 Oncogene 126581 ChimerSeq FusionScan GSE122401 C1orf52-PPP3CB C1orf52 chr1 85724206 - PPP3CB chr10 75231371 - Exonic hg19 Non-Cancer 149N 2 In-Frame Inter-chr p22.3 126582 ChimerSeq FusionScan GSE122401 CALM2-STON1 CALM2 chr2 47403579 - STON1 chr2 48807725 + Exonic hg19 Non-Cancer 149N 2 CDS-5'UTR Inter-chr p21 126583 ChimerSeq FusionScan GSE122401 COL1A1-COL3A1 COL1A1 chr17 48269148 - COL3A1 chr2 189864010 + Exonic hg19 Non-Cancer 149N 2 In-Frame Inter-chr Oncogene q21.33 126584 ChimerSeq FusionScan GSE122401 FBLN1-TCF7L2 FBLN1 chr22 45946495 + TCF7L2 chr10 114724314 + Exonic hg19 Non-Cancer 149N 2 Out-of-Frame Inter-chr Tumor suppressor gene q13.31 Oncogene Tumor suppressor gene Transcription factor 126585 ChimerSeq FusionScan GSE122401 KDM4B-MYH11 KDM4B chr19 4969241 + MYH11 chr16 15917268 - Exonic hg19 Non-Cancer 149N 2 5'UTR-CDS Inter-chr p13.3 Oncogene 126586 ChimerSeq FusionScan GSE122401 RB1-RP2 RB1 chr13 48955579 + RP2 chrX 46712910 + Exonic hg19 Non-Cancer 149N 2 In-Frame Inter-chr Oncogene Tumor suppressor gene q14.2 126587 ChimerSeq FusionScan GSE122401 NBPF3-NBPF15 NBPF3 chr1 21766841 + NBPF15 chr1 148560846 + Exonic hg19 Non-Cancer 155N 2 5'UTR-5'UTR Inter-chr p36.12 126588 ChimerSeq FusionScan GSE122401 PRH1-PRR4-PRR4 PRH1-PRR4 chr12 11126253 - PRR4 chr12 11001006 - Exonic hg19 Non-Cancer 155N 4 5'UTR-CDS Inter-chr 126589 ChimerSeq FusionScan GSE122401 RBPMS2-OAZ2 RBPMS2 chr15 65040617 - OAZ2 chr15 64983790 - Exonic hg19 Non-Cancer 155N 2 Out-of-Frame Inter-chr q22.31 126590 ChimerSeq FusionScan GSE122401 SLC5A3-MRPS6 SLC5A3 chr21 35446045 + MRPS6 chr21 35514707 + Exonic hg19 Non-Cancer 155N 2 5'UTR-CDS Inter-chr q22.11 126591 ChimerSeq FusionScan GSE122401 UBE2V1-GTF2H5 UBE2V1 chr20 48729643 - GTF2H5 chr6 158613008 + Exonic hg19 Non-Cancer 155N 2 Out-of-Frame Inter-chr q13.13 126592 ChimerSeq FusionScan GSE122401 ETS2-ANKLE2 ETS2 chr21 40178044 + ANKLE2 chr12 133306856 - Exonic hg19 Non-Cancer 161N 2 Out-of-Frame Inter-chr Tumor suppressor gene Transcription factor q22.2 126593 ChimerSeq FusionScan GSE122401 FBXO28-NVL FBXO28 chr1 224302098 + NVL chr1 224455835 - Exonic hg19 Non-Cancer 161N 2 In-Frame Inter-chr q42.11 126594 ChimerSeq FusionScan GSE122401 GATAD2B-NOTCH2NL GATAD2B chr1 153895208 - NOTCH2NL chr1 145248812 + Exonic hg19 Non-Cancer 161N 2 5'UTR-5'UTR Inter-chr Transcription factor 126595 ChimerSeq FusionScan GSE122401 GATAD2B-NOTCH2 GATAD2B chr1 153895208 - NOTCH2 chr1 120572610 - Exonic hg19 Non-Cancer 161N 2 5'UTR-CDS Inter-chr Transcription factor Oncogene Tumor suppressor gene 126596 ChimerSeq FusionScan GSE122401 HACL1-COLQ HACL1 chr3 15604864 - COLQ chr3 15531144 - Exonic hg19 Non-Cancer 161N 2 Out-of-Frame Inter-chr p25.1 126597 ChimerSeq FusionScan GSE122401 HNRNPK-SEMA4D HNRNPK chr9 86595417 - SEMA4D chr9 91996261 - Exonic hg19 Non-Cancer 161N 2 5'UTR-CDS Inter-chr q21.32 126598 ChimerSeq FusionScan GSE122401 LTK-ITGB4 LTK chr15 41799292 - ITGB4 chr17 73746760 + Exonic hg19 Non-Cancer 161N 2 In-Frame Inter-chr TK:ALK Oncogene q15.1 126599 ChimerSeq FusionScan GSE122401 MAP2K3-SLC7A7 MAP2K3 chr17 21208440 + SLC7A7 chr14 23282649 - Exonic hg19 Non-Cancer 161N 2 CDS-5'UTR Inter-chr STE:STE7 p11.2 126600 ChimerSeq FusionScan GSE122401 SHQ1-UBE2H SHQ1 chr3 72890195 - UBE2H chr7 129479175 - Exonic hg19 Non-Cancer 161N 2 Out-of-Frame Inter-chr Tumor suppressor gene p13 126601 ChimerSeq FusionScan GSE122401 SLC25A25-DLEU2 SLC25A25 chr9 130830859 + DLEU2 chr13 50601542 - Exonic hg19 Non-Cancer 161N 2 CDS-3'UTR Inter-chr q34.11 Tumor suppressor gene 126602 ChimerSeq FusionScan GSE122401 ZNF264-TRAP1 ZNF264 chr19 57703314 + TRAP1 chr16 3727659 - Exonic hg19 Non-Cancer 161N 2 In-Frame Inter-chr Transcription factor q13.43 126603 ChimerSeq FusionScan GSE122401 BTN3A3-BTN3A2 BTN3A3 chr6 26450361 + BTN3A2 chr6 26376024 + Exonic hg19 Non-Cancer 163N 2 CDS-3'UTR Inter-chr p22.2 126604 ChimerSeq FusionScan GSE122401 DUSP22-PPP2R2D DUSP22 chr6 292560 + PPP2R2D chr10 133753534 + Exonic hg19 Non-Cancer 163N 2 In-Frame Inter-chr Tumor suppressor gene p25.3 126605 ChimerSeq FusionScan GSE122401 PCMTD2-LINC00265 PCMTD2 chr20 62899363 + LINC00265 chr7 39828952 + Exonic hg19 Non-Cancer 163N 3 CDS-5'UTR Inter-chr 126606 ChimerSeq FusionScan GSE122401 PRH1-PRR4-PRR4 PRH1-PRR4 chr12 11126253 - PRR4 chr12 11001006 - Exonic hg19 Non-Cancer 163N 2 5'UTR-CDS Inter-chr 126607 ChimerSeq FusionScan GSE122401 A4GALT-CYB5R3 A4GALT chr22 43116802 - CYB5R3 chr22 43032852 - Exonic hg19 Non-Cancer 165N 2 5'UTR-5'UTR Inter-chr q13.2 126608 ChimerSeq FusionScan GSE122401 ELAC1-SMAD4 ELAC1 chr18 48500931 + SMAD4 chr18 48573289 + Exonic hg19 Non-Cancer 165N 2 CDS-5'UTR Inter-chr q21.2 Oncogene Tumor suppressor gene Transcription factor 126609 ChimerSeq FusionScan GSE122401 KLHL23-SSB KLHL23 chr2 170598047 + SSB chr2 170657461 + Exonic hg19 Non-Cancer 165N 2 CDS-5'UTR Inter-chr q31.1 126610 ChimerSeq FusionScan GSE122401 MYH11-MYH14 MYH11 chr16 15876241 - MYH14 chr19 50730159 + Exonic hg19 Non-Cancer 165N 3 In-Frame Inter-chr Oncogene 126611 ChimerSeq FusionScan GSE122401 PLDN-SQRDL PLDN chr15 45879723 + SQRDL chr15 45951104 + Exonic hg19 Non-Cancer 165N 2 CDS-5'UTR Inter-chr 126612 ChimerSeq FusionScan GSE122401 SDHD-TEX12 SDHD chr11 111959735 + TEX12 chr11 112041141 + Exonic hg19 Non-Cancer 165N 2 Out-of-Frame Inter-chr Oncogene Tumor suppressor gene q23.1 126613 ChimerSeq FusionScan GSE122401 SLC5A3-MRPS6 SLC5A3 chr21 35446045 + MRPS6 chr21 35514707 + Exonic hg19 Non-Cancer 165N 2 5'UTR-CDS Inter-chr q22.11 126614 ChimerSeq FusionScan GSE122401 WRB-SH3BGR WRB chr21 40763762 + SH3BGR chr21 40834300 + Exonic hg19 Non-Cancer 165N 2 In-Frame Inter-chr q22.2 126615 ChimerSeq FusionScan GSE122401 GHRLOS-GHRL GHRLOS chr3 10327537 + GHRL chr3 10327578 - Exonic hg19 Non-Cancer 167N 2 5'UTR-CDS Inter-chr p25.3 126616 ChimerSeq FusionScan GSE122401 GHRLOS-GHRL GHRLOS chr3 10327537 + GHRL chr3 10327578 - Exonic hg19 Non-Cancer 169N 4 5'UTR-CDS Inter-chr p25.3 126617 ChimerSeq FusionScan GSE122401 GPR65-NAA30 GPR65 chr14 88471566 + NAA30 chr14 57866545 + Exonic hg19 Non-Cancer 169N 2 5'UTR-CDS Inter-chr q31.3 126618 ChimerSeq FusionScan GSE122401 NDRG1-VIM NDRG1 chr8 134256597 - VIM chr10 17277844 + Exonic hg19 Non-Cancer 169N 2 Out-of-Frame Inter-chr Tumor suppressor gene q24.22 Tumor suppressor gene 126619 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41704448 - PGA3 chr11 60980024 + Exonic hg19 Non-Cancer 169N 2 3'UTR-CDS Inter-chr p21.1 126620 ChimerSeq FusionScan GSE122401 PGC-PGA4 PGC chr6 41704448 - PGA4 chr11 60998853 + Exonic hg19 Non-Cancer 169N 2 3'UTR-CDS Inter-chr p21.1 126621 ChimerSeq FusionScan GSE122401 SDHA-GIF SDHA chr5 228448 + GIF chr11 59599269 - Exonic hg19 Non-Cancer 169N 2 In-Frame Inter-chr Oncogene Tumor suppressor gene p15.33 126622 ChimerSeq FusionScan GSE122401 APOL2-TBC1D22A APOL2 chr22 36635486 - TBC1D22A chr22 47307969 + Exonic hg19 Non-Cancer 173N 2 5'UTR-CDS Inter-chr q12.3 126623 ChimerSeq FusionScan GSE122401 CAPZA1-RAP1A CAPZA1 chr1 113162505 + RAP1A chr1 112233955 + Exonic hg19 Non-Cancer 173N 2 CDS-5'UTR Inter-chr p13.2 Tumor suppressor gene 126624 ChimerSeq FusionScan GSE122401 CD81-SERPINF1 CD81 chr11 2415422 + SERPINF1 chr17 1678351 + Exonic hg19 Non-Cancer 173N 2 Out-of-Frame Inter-chr p15.5 126625 ChimerSeq FusionScan GSE122401 CHM-FAM208A CHM chrX 85149192 - FAM208A chr3 56707753 - Exonic hg19 Non-Cancer 173N 2 In-Frame Inter-chr q21.2 126626 ChimerSeq FusionScan GSE122401 COG3-TPT1 COG3 chr13 46039345 + TPT1 chr13 45911523 - Exonic hg19 Non-Cancer 173N 2 In-Frame Inter-chr q14.13 126627 ChimerSeq FusionScan GSE122401 EXOC5-SUCLA2 EXOC5 chr14 57702428 - SUCLA2 chr13 48517580 - Exonic hg19 Non-Cancer 173N 2 In-Frame Inter-chr q22.3 126628 ChimerSeq FusionScan GSE122401 GGA1-TRIM22 GGA1 chr22 38013004 + TRIM22 chr11 5719544 + Exonic hg19 Non-Cancer 173N 2 In-Frame Inter-chr q13.1 126629 ChimerSeq FusionScan GSE122401 ITFG3-SPATA2L ITFG3 chr16 304680 + SPATA2L chr16 89764713 - Exonic hg19 Non-Cancer 173N 2 Out-of-Frame Inter-chr 126630 ChimerSeq FusionScan GSE122401 KAT6B-PPP3CB KAT6B chr10 76748870 + PPP3CB chr10 75206331 - Exonic hg19 Non-Cancer 173N 2 In-Frame Inter-chr Oncogene 126631 ChimerSeq FusionScan GSE122401 KIAA1467-RBM14-RBM4 KIAA1467 chr12 13229077 + RBM14-RBM4 chr11 66410920 + Exonic hg19 Non-Cancer 173N 2 CDS-3'UTR Inter-chr Tumor suppressor gene 126632 ChimerSeq FusionScan GSE122401 LRCH1-ATP13A3 LRCH1 chr13 47127838 + ATP13A3 chr3 194126845 - Exonic hg19 Non-Cancer 173N 2 Out-of-Frame Inter-chr q14.13 126633 ChimerSeq FusionScan GSE122401 MLLT3-PRH1-PRR4 MLLT3 chr9 20620652 - PRH1-PRR4 chr12 11199787 - Exonic hg19 Non-Cancer 173N 2 CDS-5'UTR Inter-chr p21.3 126634 ChimerSeq FusionScan GSE122401 OGT-DMXL1 OGT chrX 70784603 + DMXL1 chr5 118582689 + Exonic hg19 Non-Cancer 173N 2 In-Frame Inter-chr q13.1 126635 ChimerSeq FusionScan GSE122401 PTCH1-FLNA PTCH1 chr9 98232094 - FLNA chrX 153578575 - Exonic hg19 Non-Cancer 173N 2 Out-of-Frame Inter-chr Oncogene Tumor suppressor gene q22.32 Tumor suppressor gene 126636 ChimerSeq FusionScan GSE122401 SEL1L3-SNRPN SEL1L3 chr4 25760562 - SNRPN chr15 25213078 + Exonic hg19 Non-Cancer 173N 2 CDS-5'UTR Inter-chr p15.2 126637 ChimerSeq FusionScan GSE122401 SLC7A1-HINT1 SLC7A1 chr13 30109955 - HINT1 chr5 130495304 - Exonic hg19 Non-Cancer 173N 2 Out-of-Frame Inter-chr q12.3 Tumor suppressor gene 126638 ChimerSeq FusionScan GSE122401 SRBD1-PPM1B SRBD1 chr2 45645503 - PPM1B chr2 44459454 + Exonic hg19 Non-Cancer 173N 2 Out-of-Frame Inter-chr p21 126639 ChimerSeq FusionScan GSE122401 TBCB-TBC1D9B TBCB chr19 36606576 + TBC1D9B chr5 179306197 - Exonic hg19 Non-Cancer 173N 2 In-Frame Inter-chr q13.12 126640 ChimerSeq FusionScan GSE122401 TNFSF10-PPP6R3 TNFSF10 chr3 172241042 - PPP6R3 chr11 68367808 + Exonic hg19 Non-Cancer 173N 2 Out-of-Frame Inter-chr q26.31 126641 ChimerSeq FusionScan GSE122401 ZNF317-HNRNPH3 ZNF317 chr19 9251268 + HNRNPH3 chr10 70096955 + Exonic hg19 Non-Cancer 173N 2 5'UTR-5'UTR Inter-chr Transcription factor p13.2 126642 ChimerSeq FusionScan GSE122401 B2M-TFF1 B2M chr15 45003811 + TFF1 chr21 43783516 - Exonic hg19 Non-Cancer 179N 2 In-Frame Inter-chr Oncogene 126643 ChimerSeq FusionScan GSE122401 DTHD1-PTPLB DTHD1 chr4 36296661 + PTPLB chr3 123221528 - Exonic hg19 Non-Cancer 179N 2 Out-of-Frame Inter-chr p14 126644 ChimerSeq FusionScan GSE122401 FAM81A-NCAPH FAM81A chr15 59730481 + NCAPH chr2 97039029 + Exonic hg19 Non-Cancer 179N 2 5'UTR-CDS Inter-chr q22.2 126645 ChimerSeq FusionScan GSE122401 KRT19-CFL1 KRT19 chr17 39684079 - CFL1 chr11 65623713 - Exonic hg19 Non-Cancer 179N 2 In-Frame Inter-chr Tumor suppressor gene q21.2 126646 ChimerSeq FusionScan GSE122401 LRP1-ATP5B LRP1 chr12 57550703 + ATP5B chr12 57037371 - Exonic hg19 Non-Cancer 179N 2 In-Frame Inter-chr q13.3 126647 ChimerSeq FusionScan GSE122401 NCKAP5L-INTS4 NCKAP5L chr12 50222104 - INTS4 chr11 77594998 - Exonic hg19 Non-Cancer 179N 2 5'UTR-CDS Inter-chr q13.12 126648 ChimerSeq FusionScan GSE122401 SLIRP-CYP3A5 SLIRP chr14 78182222 + CYP3A5 chr7 99250402 - Exonic hg19 Non-Cancer 179N 2 In-Frame Inter-chr q24.3 126649 ChimerSeq FusionScan GSE122401 THADA-THAP10 THADA chr2 43712372 - THAP10 chr15 71175247 - Exonic hg19 Non-Cancer 179N 2 Out-of-Frame Inter-chr p21 Transcription factor 126650 ChimerSeq FusionScan GSE122401 THRAP3-TMEM128 THRAP3 chr1 36690106 + TMEM128 chr4 4248070 - Exonic hg19 Non-Cancer 179N 2 5'UTR-CDS Inter-chr p34.3 126651 ChimerSeq FusionScan GSE122401 ZNF277-FBXL13 ZNF277 chr7 111846862 + FBXL13 chr7 102566821 - Exonic hg19 Non-Cancer 179N 2 Out-of-Frame Inter-chr Transcription factor q31.1 Tumor suppressor gene 126652 ChimerSeq FusionScan GSE122401 ZNF605-LRIG3 ZNF605 chr12 133522206 - LRIG3 chr12 59308117 - Exonic hg19 Non-Cancer 179N 2 Out-of-Frame Inter-chr Transcription factor q24.33 Tumor suppressor gene 126653 ChimerSeq FusionScan GSE122401 CNN1-CNN2 CNN1 chr19 11658722 + CNN2 chr19 1036414 + Exonic hg19 Non-Cancer 181N 3 In-Frame Inter-chr Tumor suppressor gene p13.2 126654 ChimerSeq FusionScan GSE122401 FBXL19-ORAI2 FBXL19 chr16 30958269 + ORAI2 chr7 102086959 + Exonic hg19 Non-Cancer 181N 3 Out-of-Frame Inter-chr Transcription factor p11.2 126655 ChimerSeq FusionScan GSE122401 ATPBD4-AQR ATPBD4 chr15 35665721 - AQR chr15 35155242 - Exonic hg19 Non-Cancer 189N 2 Out-of-Frame Inter-chr 126656 ChimerSeq FusionScan GSE122401 ATRX-ATP7A ATRX chrX 77041467 - ATP7A chrX 77227117 + Exonic hg19 Non-Cancer 189N 2 CDS-5'UTR Inter-chr Oncogene q21.1 126657 ChimerSeq FusionScan GSE122401 BRI3BP-UBC BRI3BP chr12 125478549 + UBC chr12 125398320 - Exonic hg19 Non-Cancer 189N 3 CDS-5'UTR Inter-chr q24.31 126658 ChimerSeq FusionScan GSE122401 CCDC92-UBC CCDC92 chr12 124457075 - UBC chr12 125398320 - Exonic hg19 Non-Cancer 189N 2 5'UTR-5'UTR Inter-chr 126659 ChimerSeq FusionScan GSE122401 COL18A1-C21orf56 COL18A1 chr21 46917575 + C21orf56 chr21 47588572 - Exonic hg19 Non-Cancer 189N 2 In-Frame Inter-chr q22.3 126660 ChimerSeq FusionScan GSE122401 ERBB2-JUP ERBB2 chr17 37872192 + JUP chr17 39911684 - Exonic hg19 Non-Cancer 189N 2 CDS-3'UTR Inter-chr Oncogene q12 Tumor suppressor gene 126661 ChimerSeq FusionScan GSE122401 HEATR7A-SERPINB6 HEATR7A chr8 145255444 + SERPINB6 chr6 2955904 - Exonic hg19 Non-Cancer 189N 2 Out-of-Frame Inter-chr 126662 ChimerSeq FusionScan GSE122401 MCC-COMMD10 MCC chr5 112437435 - COMMD10 chr5 115627213 + Exonic hg19 Non-Cancer 189N 2 In-Frame Inter-chr Tumor suppressor gene q22.2 126663 ChimerSeq FusionScan GSE122401 MKKS-ABCC3 MKKS chr20 10414755 - ABCC3 chr17 48733192 + Exonic hg19 Non-Cancer 189N 2 5'UTR-CDS Inter-chr p12.2 126664 ChimerSeq FusionScan GSE122401 MRPL23-SKIL MRPL23 chr11 1974085 + SKIL chr3 170077486 + Exonic hg19 Non-Cancer 189N 2 CDS-5'UTR Inter-chr p15.5 Tumor suppressor gene Transcription factor 126665 ChimerSeq FusionScan GSE122401 SELENBP1-CCT3 SELENBP1 chr1 151345113 - CCT3 chr1 156279094 - Exonic hg19 Non-Cancer 189N 2 Out-of-Frame Inter-chr Tumor suppressor gene q21.3 126666 ChimerSeq FusionScan GSE122401 TAOK1-CLEC16A TAOK1 chr17 27718042 + CLEC16A chr16 11114049 + Exonic hg19 Non-Cancer 189N 2 5'UTR-CDS Inter-chr q11.2 126667 ChimerSeq FusionScan GSE122401 THAP6-ANXA10 THAP6 chr4 76447071 + ANXA10 chr4 169083678 + Exonic hg19 Non-Cancer 189N 2 In-Frame Inter-chr Transcription factor q21.1 126668 ChimerSeq FusionScan GSE122401 TIMP1-GLTSCR2 TIMP1 chrX 47442935 + GLTSCR2 chr19 48259784 + Exonic hg19 Non-Cancer 189N 2 Out-of-Frame Inter-chr p11.3 Tumor suppressor gene 126669 ChimerSeq FusionScan GSE122401 UBE2E1-CMC1 UBE2E1 chr3 23848912 + CMC1 chr3 28304781 + Exonic hg19 Non-Cancer 189N 2 Out-of-Frame Inter-chr p24.2 126670 ChimerSeq FusionScan GSE122401 YPEL3-SRRM2 YPEL3 chr16 30107417 - SRRM2 chr16 2820352 + Exonic hg19 Non-Cancer 193N 2 5'UTR-CDS Inter-chr Tumor suppressor gene p11.2 126671 ChimerSeq FusionScan GSE122401 C18orf1-PTPRM C18orf1 chr18 13438383 + PTPRM chr18 8296365 + Exonic hg19 Non-Cancer 195N 2 Out-of-Frame Inter-chr 126672 ChimerSeq FusionScan GSE122401 ESRP1-MYSM1 ESRP1 chr8 95680478 + MYSM1 chr1 59150923 - Exonic hg19 Non-Cancer 195N 2 In-Frame Inter-chr Tumor suppressor gene q22.1 Transcription factor 126673 ChimerSeq FusionScan GSE122401 LZTS2-PTPRK LZTS2 chr10 102762703 + PTPRK chr6 128718833 - Exonic hg19 Non-Cancer 195N 2 Out-of-Frame Inter-chr q24.31 Tumor suppressor gene 126674 ChimerSeq FusionScan GSE122401 PTPRK-YPEL5 PTPRK chr6 128643183 - YPEL5 chr2 30379493 + Exonic hg19 Non-Cancer 195N 2 CDS-5'UTR Inter-chr Tumor suppressor gene 126675 ChimerSeq FusionScan GSE122401 ABHD14B-ORC1 ABHD14B chr3 52007980 - ORC1 chr1 52863535 - Exonic hg19 Non-Cancer 201N 2 In-Frame Inter-chr p21.2 126676 ChimerSeq FusionScan GSE122401 ARMCX5-GPRASP2-GPRASP1 ARMCX5-GPRASP2 chrX 101860581 + GPRASP1 chrX 101908148 + Exonic hg19 Non-Cancer 201N 2 Out-of-Frame Inter-chr q22.1 126677 ChimerSeq FusionScan GSE122401 ARSB-COMMD7 ARSB chr5 78251117 - COMMD7 chr20 31294562 - Exonic hg19 Non-Cancer 201N 2 In-Frame Inter-chr q14.1 126678 ChimerSeq FusionScan GSE122401 ATP2C2-SARS ATP2C2 chr16 84459407 + SARS chr1 109777831 + Exonic hg19 Non-Cancer 201N 5 Out-of-Frame Inter-chr q24.1 126679 ChimerSeq FusionScan GSE122401 BRI3BP-UBC BRI3BP chr12 125478549 + UBC chr12 125398320 - Exonic hg19 Non-Cancer 201N 2 CDS-5'UTR Inter-chr q24.31 126680 ChimerSeq FusionScan GSE122401 C15orf38-PIP4K2B C15orf38 chr15 90446447 - PIP4K2B chr17 36926792 - Exonic hg19 Non-Cancer 201N 2 Out-of-Frame Inter-chr 126681 ChimerSeq FusionScan GSE122401 CPSF6-LYZ CPSF6 chr12 69633486 + LYZ chr12 69743887 + Exonic hg19 Non-Cancer 201N 2 Out-of-Frame Inter-chr q15 126682 ChimerSeq FusionScan GSE122401 DUOXA2-SLC39A1 DUOXA2 chr15 45408456 + SLC39A1 chr1 153934826 - Exonic hg19 Non-Cancer 201N 3 In-Frame Inter-chr q21.1 Tumor suppressor gene 126683 ChimerSeq FusionScan GSE122401 FAM69A-UBR3 FAM69A chr1 93426932 - UBR3 chr2 170897391 + Exonic hg19 Non-Cancer 201N 2 Out-of-Frame Inter-chr p22.1 126684 ChimerSeq FusionScan GSE122401 FLJ32224-GNB1 FLJ32224 chr1 43439859 + GNB1 chr1 1770677 - Exonic hg19 Non-Cancer 201N 3 5'UTR-5'UTR Inter-chr 126685 ChimerSeq FusionScan GSE122401 HBP1-COG5 HBP1 chr7 106840746 + COG5 chr7 106844075 - Exonic hg19 Non-Cancer 201N 2 Out-of-Frame Inter-chr Tumor suppressor gene Transcription factor 126686 ChimerSeq FusionScan GSE122401 ITPK1-FAM221B ITPK1 chr14 93581413 - FAM221B chr9 35826158 - Exonic hg19 Non-Cancer 201N 2 CDS-5'UTR Inter-chr 126687 ChimerSeq FusionScan GSE122401 MAP4K3-MPHOSPH8 MAP4K3 chr2 39536601 - MPHOSPH8 chr13 20245345 + Exonic hg19 Non-Cancer 201N 2 In-Frame Inter-chr p22.1 126688 ChimerSeq FusionScan GSE122401 MDM2-GTF2I MDM2 chr12 69210725 + GTF2I chr7 74171151 + Exonic hg19 Non-Cancer 201N 2 Out-of-Frame Inter-chr Oncogene q15 Transcription factor 126689 ChimerSeq FusionScan GSE122401 MGC2752-IL9R MGC2752 chr19 59086955 + IL9R chrY 59337948 + Exonic hg19 Non-Cancer 201N 4 5'UTR-5'UTR Inter-chr 126690 ChimerSeq FusionScan GSE122401 PDIA4-PDIA3 PDIA4 chr7 148711995 - PDIA3 chr15 44046021 + Exonic hg19 Non-Cancer 201N 91 In-Frame Inter-chr q36.1 126691 ChimerSeq FusionScan GSE122401 PTBP2-ABCD3 PTBP2 chr1 97189150 + ABCD3 chr1 94924162 + Exonic hg19 Non-Cancer 201N 2 Out-of-Frame Inter-chr p21.3 126692 ChimerSeq FusionScan GSE122401 TSSC1-VRK2 TSSC1 chr2 3341787 - VRK2 chr2 58350235 + Exonic hg19 Non-Cancer 201N 2 Out-of-Frame Inter-chr p25.3 CK1:VRK 126693 ChimerSeq FusionScan GSE122401 UBA1-UBA7 UBA1 chrX 47071911 + UBA7 chr3 49845545 - Exonic hg19 Non-Cancer 201N 31 In-Frame Inter-chr p11.3 126694 ChimerSeq FusionScan GSE122401 USP48-CTNNBIP1 USP48 chr1 22109316 - CTNNBIP1 chr1 9938047 - Exonic hg19 Non-Cancer 201N 2 CDS-5'UTR Inter-chr p36.12 Tumor suppressor gene 126695 ChimerSeq FusionScan GSE122401 USP48-SNRPN USP48 chr1 22109316 - SNRPN chr15 25213078 + Exonic hg19 Non-Cancer 201N 2 CDS-5'UTR Inter-chr p36.12 126696 ChimerSeq FusionScan GSE122401 UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer 201N 12 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126697 ChimerSeq FusionScan GSE122401 ZNF124-ARF4 ZNF124 chr1 247335149 - ARF4 chr3 57570191 - Exonic hg19 Non-Cancer 201N 2 Out-of-Frame Inter-chr Transcription factor q44 126698 ChimerSeq FusionScan GSE122401 ZNF384-ZNF362 ZNF384 chr12 6781515 - ZNF362 chr1 33760537 + Exonic hg19 Non-Cancer 201N 18 In-Frame Inter-chr Oncogene Transcription factor p13.31 Transcription factor 126699 ChimerSeq FusionScan GSE122401 ACVR1C-ACVR1B ACVR1C chr2 158406673 - ACVR1B chr12 52377782 + Exonic hg19 Non-Cancer 203N 25 In-Frame Inter-chr Tumor suppressor gene q24.1 Oncogene 126700 ChimerSeq FusionScan GSE122401 AHSA2-ASXL1 AHSA2 chr2 61412753 + ASXL1 chr20 31022234 + Exonic hg19 Non-Cancer 203N 2 In-Frame Inter-chr p15 Oncogene Tumor suppressor gene 126701 ChimerSeq FusionScan GSE122401 APPL1-RASEF APPL1 chr3 57272144 + RASEF chr9 85597697 - Exonic hg19 Non-Cancer 203N 2 Out-of-Frame Inter-chr p14.3 126702 ChimerSeq FusionScan GSE122401 EIF2AK4-SRP14 EIF2AK4 chr15 40326645 + SRP14 chr15 40329219 - Exonic hg19 Non-Cancer 203N 2 Out-of-Frame Inter-chr q15.1 126703 ChimerSeq FusionScan GSE122401 EIF4G2-PSMA1 EIF4G2 chr11 10827453 - PSMA1 chr11 14532497 - Exonic hg19 Non-Cancer 203N 2 Out-of-Frame Inter-chr p15.4 126704 ChimerSeq FusionScan GSE122401 EXD3-SKIL EXD3 chr9 140218176 - SKIL chr3 170077486 + Exonic hg19 Non-Cancer 203N 2 CDS-5'UTR Inter-chr q34.3 Tumor suppressor gene Transcription factor 126705 ChimerSeq FusionScan GSE122401 GALNT3-SUCLG1 GALNT3 chr2 166650524 - SUCLG1 chr2 84652727 - Exonic hg19 Non-Cancer 203N 2 5'UTR-CDS Inter-chr q24.3 126706 ChimerSeq FusionScan GSE122401 GKN2-GKN1 GKN2 chr2 69179981 - GKN1 chr2 69204626 + Exonic hg19 Non-Cancer 203N 35 In-Frame Inter-chr Tumor suppressor gene p13.3 Tumor suppressor gene 126707 ChimerSeq FusionScan GSE122401 HEXDC-GKN1 HEXDC chr17 80377759 + GKN1 chr2 69206002 + Exonic hg19 Non-Cancer 203N 2 In-Frame Inter-chr q25.3 Tumor suppressor gene 126708 ChimerSeq FusionScan GSE122401 LIPF-PGA3 LIPF chr10 90427443 + PGA3 chr11 60977313 + Exonic hg19 Non-Cancer 203N 2 Out-of-Frame Inter-chr q23.31 126709 ChimerSeq FusionScan GSE122401 LMNA-LMNB2 LMNA chr1 156105912 + LMNB2 chr19 2434103 - Exonic hg19 Non-Cancer 203N 39 In-Frame Inter-chr q22 126710 ChimerSeq FusionScan GSE122401 LRP5-LRP1 LRP5 chr11 68115711 + LRP1 chr12 57592247 + Exonic hg19 Non-Cancer 203N 10 In-Frame Inter-chr q13.2 126711 ChimerSeq FusionScan GSE122401 LYZ-LARS LYZ chr12 69746078 + LARS chr5 145519824 - Exonic hg19 Non-Cancer 203N 2 In-Frame Inter-chr q15 126712 ChimerSeq FusionScan GSE122401 MARCH6-IRX2 2019_ 3_ 6_ chr5 10354029 + IRX2 chr5 2749901 - Exonic hg19 Non-Cancer 203N 2 Out-of-Frame Inter-chr p15.2 Transcription factor 126713 ChimerSeq FusionScan GSE122401 MGC2752-IL9R MGC2752 chr19 59086955 + IL9R chrY 59337948 + Exonic hg19 Non-Cancer 203N 7 5'UTR-5'UTR Inter-chr 126714 ChimerSeq FusionScan GSE122401 NCOR1-CYP2C9 NCOR1 chr17 16021201 - CYP2C9 chr10 96701614 + Exonic hg19 Non-Cancer 203N 2 In-Frame Inter-chr Oncogene p11.2 126715 ChimerSeq FusionScan GSE122401 PCCA-TM9SF2 PCCA chr13 100809594 + TM9SF2 chr13 100169867 + Exonic hg19 Non-Cancer 203N 5 In-Frame Inter-chr q32.3 126716 ChimerSeq FusionScan GSE122401 PGA3-CKB PGA3 chr11 60978907 + CKB chr14 103988287 - Exonic hg19 Non-Cancer 203N 2 In-Frame Inter-chr q12.2 126717 ChimerSeq FusionScan GSE122401 PGA3-CTSE PGA3 chr11 60971741 + CTSE chr1 206319100 + Exonic hg19 Non-Cancer 203N 32 In-Frame Inter-chr q12.2 126718 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60974099 + PGC chr6 41711127 - Exonic hg19 Non-Cancer 203N 47 In-Frame Inter-chr q12.2 126719 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60975962 + PGC chr6 41708348 - Exonic hg19 Non-Cancer 203N 220 In-Frame Inter-chr q12.2 126720 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41710027 - PGA3 chr11 60977313 + Exonic hg19 Non-Cancer 203N 9 In-Frame Inter-chr p21.1 126721 ChimerSeq FusionScan GSE122401 PITPNB-CYSTM1 PITPNB chr22 28306951 - CYSTM1 chr5 139574030 + Exonic hg19 Non-Cancer 203N 2 CDS-5'UTR Inter-chr q12.1 126722 ChimerSeq FusionScan GSE122401 PRSS3-PRSS1 PRSS3 chr9 33798080 + PRSS1 chr7 142460281 + Exonic hg19 Non-Cancer 203N 46 In-Frame Inter-chr p13.3 126723 ChimerSeq FusionScan GSE122401 RNF168-PHC3 RNF168 chr3 196229743 - PHC3 chr3 169840532 - Exonic hg19 Non-Cancer 203N 2 Out-of-Frame Inter-chr q29 Tumor suppressor gene 126724 ChimerSeq FusionScan GSE122401 SP100-TRIP12 SP100 chr2 231282380 + TRIP12 chr2 230744844 - Exonic hg19 Non-Cancer 203N 2 5'UTR-5'UTR Inter-chr Tumor suppressor gene Transcription factor q37.1 126725 ChimerSeq FusionScan GSE122401 SSFA2-NFE2L2 SSFA2 chr2 182787139 + NFE2L2 chr2 178098999 - Exonic hg19 Non-Cancer 203N 2 In-Frame Inter-chr q31.3 Oncogene Transcription factor 126726 ChimerSeq FusionScan GSE122401 SYTL4-TSPAN6 SYTL4 chrX 99940986 - TSPAN6 chrX 99890743 - Exonic hg19 Non-Cancer 203N 3 In-Frame Inter-chr q22.1 126727 ChimerSeq FusionScan GSE122401 TTC35-CHMP3 TTC35 chr8 109465376 + CHMP3 chr2 86737602 - Exonic hg19 Non-Cancer 203N 2 Out-of-Frame Inter-chr 126728 ChimerSeq FusionScan GSE122401 TUBA1C-AKAP17A TUBA1C chr12 49663470 + AKAP17A chrY 1669551 + Exonic hg19 Non-Cancer 203N 2 Out-of-Frame Inter-chr q13.12 126729 ChimerSeq FusionScan GSE122401 UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer 203N 7 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126730 ChimerSeq FusionScan GSE122401 ZEB1-RSU1 ZEB1 chr10 31608221 + RSU1 chr10 16737154 - Exonic hg19 Non-Cancer 203N 2 In-Frame Inter-chr Transcription factor p11.22 126731 ChimerSeq FusionScan GSE122401 ZNF787-ZADH2 ZNF787 chr19 56632540 - ZADH2 chr18 72914295 - Exonic hg19 Non-Cancer 203N 2 5'UTR-CDS Inter-chr Transcription factor q13.43 126732 ChimerSeq FusionScan GSE122401 ASCC3-TMEM30A ASCC3 chr6 101311939 - TMEM30A chr6 75977464 - Exonic hg19 Non-Cancer 211N 2 Out-of-Frame Inter-chr q16.3 126733 ChimerSeq FusionScan GSE122401 LSR-CAPN3 LSR chr19 35741562 + CAPN3 chr15 42700408 + Exonic hg19 Non-Cancer 211N 2 Out-of-Frame Inter-chr q13.12 126734 ChimerSeq FusionScan GSE122401 MX1-FAM3B MX1 chr21 42813841 + FAM3B chr21 42716402 + Exonic hg19 Non-Cancer 211N 16 In-Frame Inter-chr q22.3 126735 ChimerSeq FusionScan GSE122401 PGC-USE1 PGC chr6 41710027 - USE1 chr19 17330021 + Exonic hg19 Non-Cancer 211N 2 In-Frame Inter-chr p21.1 126736 ChimerSeq FusionScan GSE122401 TMEM14A-TBCD TMEM14A chr6 52546712 + TBCD chr17 80879376 + Exonic hg19 Non-Cancer 211N 2 In-Frame Inter-chr p12.2 126737 ChimerSeq FusionScan GSE122401 XPR1-ACBD6 XPR1 chr1 180601406 + ACBD6 chr1 180382606 - Exonic hg19 Non-Cancer 211N 2 Out-of-Frame Inter-chr q25.3 126738 ChimerSeq FusionScan GSE122401 ZNF677-ACYP1 ZNF677 chr19 53746996 - ACYP1 chr14 75520362 - Exonic hg19 Non-Cancer 211N 2 In-Frame Inter-chr Transcription factor q13.42 126739 ChimerSeq FusionScan GSE122401 CLK3-CAPN8 CLK3 chr15 74912566 + CAPN8 chr1 223718212 - Exonic hg19 Non-Cancer 215N 2 In-Frame Inter-chr CMGC:CLK q24.1 126740 ChimerSeq FusionScan GSE122401 CREBBP-NFE2L3 CREBBP chr16 3900297 - NFE2L3 chr7 26217562 + Exonic hg19 Non-Cancer 215N 2 In-Frame Inter-chr Oncogene Tumor suppressor gene p13.3 Transcription factor 126741 ChimerSeq FusionScan GSE122401 CTSE-WBP2 CTSE chr1 206325437 + WBP2 chr17 73842868 - Exonic hg19 Non-Cancer 215N 2 Out-of-Frame Inter-chr q32.1 126742 ChimerSeq FusionScan GSE122401 ERMAP-EIF2B3 ERMAP chr1 43282924 + EIF2B3 chr1 45323479 - Exonic hg19 Non-Cancer 215N 2 5'UTR-CDS Inter-chr p34.2 126743 ChimerSeq FusionScan GSE122401 HSP90B1-S100A4 HSP90B1 chr12 104340474 + S100A4 chr1 153516399 - Exonic hg19 Non-Cancer 215N 2 In-Frame Inter-chr Tumor suppressor gene q23.3 126744 ChimerSeq FusionScan GSE122401 NCOA2-PCMTD1 NCOA2 chr8 71315934 - PCMTD1 chr8 52758323 - Exonic hg19 Non-Cancer 215N 2 5'UTR-CDS Inter-chr Oncogene Transcription factor q13.3 126745 ChimerSeq FusionScan GSE122401 NHP2L1-CSNK1E NHP2L1 chr22 42084797 - CSNK1E chr22 38710174 - Exonic hg19 Non-Cancer 215N 2 CDS-5'UTR Inter-chr 126746 ChimerSeq FusionScan GSE122401 PCBD2-SKP1 PCBD2 chr5 134246156 + SKP1 chr5 133509713 - Exonic hg19 Non-Cancer 215N 2 CDS-5'UTR Inter-chr q31.1 126747 ChimerSeq FusionScan GSE122401 SLCO5A1-SNX13 SLCO5A1 chr8 70744001 - SNX13 chr7 17915413 - Exonic hg19 Non-Cancer 215N 2 Out-of-Frame Inter-chr q13.3 126748 ChimerSeq FusionScan GSE122401 CTSE-PGA3 CTSE chr1 206318467 + PGA3 chr11 60973981 + Exonic hg19 Non-Cancer 217N 32 In-Frame Inter-chr q32.1 126749 ChimerSeq FusionScan GSE122401 LIPF-TMED6 LIPF chr10 90431722 + TMED6 chr16 69383554 - Exonic hg19 Non-Cancer 217N 4 In-Frame Inter-chr q23.31 126750 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60974099 + PGC chr6 41711127 - Exonic hg19 Non-Cancer 217N 54 In-Frame Inter-chr q12.2 126751 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60975962 + PGC chr6 41708348 - Exonic hg19 Non-Cancer 217N 27 In-Frame Inter-chr q12.2 126752 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41710027 - PGA3 chr11 60977313 + Exonic hg19 Non-Cancer 217N 19 In-Frame Inter-chr p21.1 126753 ChimerSeq FusionScan GSE122401 AGAP3-FAM156A AGAP3 chr7 150784159 + FAM156A chrX 52985544 - Exonic hg19 Non-Cancer 219N 2 CDS-5'UTR Inter-chr q36.1 126754 ChimerSeq FusionScan GSE122401 ATAD2B-MMP15 ATAD2B chr2 24056788 - MMP15 chr16 58071375 + Exonic hg19 Non-Cancer 219N 2 In-Frame Inter-chr p23.3 126755 ChimerSeq FusionScan GSE122401 FAM172A-LOX FAM172A chr5 93294481 - LOX chr5 121411236 - Exonic hg19 Non-Cancer 219N 2 Out-of-Frame Inter-chr Tumor suppressor gene q15 Tumor suppressor gene 126756 ChimerSeq FusionScan GSE122401 SHANK3-DYNC1LI2 SHANK3 chr22 51115121 + DYNC1LI2 chr16 66757725 - Exonic hg19 Non-Cancer 219N 2 Out-of-Frame Inter-chr 126757 ChimerSeq FusionScan GSE122401 ARID5B-ZADH2 ARID5B chr10 63662172 + ZADH2 chr18 72914295 - Exonic hg19 Non-Cancer 221N 2 Out-of-Frame Inter-chr Transcription factor q21.2 126758 ChimerSeq FusionScan GSE122401 PSMA7-GSTT1 PSMA7 chr20 60718263 - GSTT1 chr22 24379511 - Exonic hg19 Non-Cancer 221N 2 Out-of-Frame Inter-chr q13.33 Tumor suppressor gene 126759 ChimerSeq FusionScan GSE122401 RHBDL2-UTP11L RHBDL2 chr1 39407353 - UTP11L chr1 38488370 + Exonic hg19 Non-Cancer 221N 2 5'UTR-CDS Inter-chr p34.3 126760 ChimerSeq FusionScan GSE122401 SNX6-ADTRP SNX6 chr14 35055435 - ADTRP chr6 11723733 - Exonic hg19 Non-Cancer 221N 2 In-Frame Inter-chr q13.1 126761 ChimerSeq FusionScan GSE122401 AP1M1-EPS15L1 AP1M1 chr19 16308879 + EPS15L1 chr19 16515560 - Exonic hg19 Non-Cancer 231N 2 In-Frame Inter-chr p13.11 126762 ChimerSeq FusionScan GSE122401 ASH1L-GNB1 ASH1L chr1 155531943 - GNB1 chr1 1749314 - Exonic hg19 Non-Cancer 231N 2 5'UTR-CDS Inter-chr Transcription factor q22 126763 ChimerSeq FusionScan GSE122401 CALM2-STK39 CALM2 chr2 47403579 - STK39 chr2 168931741 - Exonic hg19 Non-Cancer 231N 2 In-Frame Inter-chr p21 126764 ChimerSeq FusionScan GSE122401 CCND3-CDC5L CCND3 chr6 42016238 - CDC5L chr6 44413391 + Exonic hg19 Non-Cancer 231N 2 5'UTR-5'UTR Inter-chr p21.1 Transcription factor 126765 ChimerSeq FusionScan GSE122401 DCAF4-C17orf98 DCAF4 chr14 73423208 + C17orf98 chr17 36993493 - Exonic hg19 Non-Cancer 231N 2 Out-of-Frame Inter-chr q24.2 126766 ChimerSeq FusionScan GSE122401 DIDO1-UBE2L3 DIDO1 chr20 61569147 - UBE2L3 chr22 21947149 + Exonic hg19 Non-Cancer 231N 2 5'UTR-5'UTR Inter-chr Tumor suppressor gene q13.33 126767 ChimerSeq FusionScan GSE122401 EPHB3-EPHB2 EPHB3 chr3 184289170 + EPHB2 chr1 23110884 + Exonic hg19 Non-Cancer 231N 15 In-Frame Inter-chr Tumor suppressor gene q27.1 Tumor suppressor gene 126768 ChimerSeq FusionScan GSE122401 GNAQ-HNRNPH1 GNAQ chr9 80412435 - HNRNPH1 chr5 179045324 - Exonic hg19 Non-Cancer 231N 2 In-Frame Inter-chr Oncogene q21.2 126769 ChimerSeq FusionScan GSE122401 HELZ-SH3YL1 HELZ chr17 65103284 - SH3YL1 chr2 219001 - Exonic hg19 Non-Cancer 231N 2 Out-of-Frame Inter-chr q24.2 126770 ChimerSeq FusionScan GSE122401 KDM5C-ARFGAP1 KDM5C chrX 53222618 - ARFGAP1 chr20 61916217 + Exonic hg19 Non-Cancer 231N 2 In-Frame Inter-chr Oncogene p11.22 126771 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60971741 + PGC chr6 41712252 - Exonic hg19 Non-Cancer 231N 7 In-Frame Inter-chr q12.2 126772 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60974099 + PGC chr6 41711127 - Exonic hg19 Non-Cancer 231N 42 In-Frame Inter-chr q12.2 126773 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60975962 + PGC chr6 41708348 - Exonic hg19 Non-Cancer 231N 206 In-Frame Inter-chr q12.2 126774 ChimerSeq FusionScan GSE122401 PIP5K1B-PSPC1 PIP5K1B chr9 71437599 + PSPC1 chr13 20251963 - Exonic hg19 Non-Cancer 231N 2 CDS-3'UTR Inter-chr q21.11 126775 ChimerSeq FusionScan GSE122401 SATB1-DDX50 SATB1 chr3 18419661 - DDX50 chr10 70666466 + Exonic hg19 Non-Cancer 231N 2 In-Frame Inter-chr Transcription factor p24.3 126776 ChimerSeq FusionScan GSE122401 SEL1L3-ATG12 SEL1L3 chr4 25766947 - ATG12 chr5 115168361 - Exonic hg19 Non-Cancer 231N 2 In-Frame Inter-chr p15.2 126777 ChimerSeq FusionScan GSE122401 STARD10-EFHA1 STARD10 chr11 72466745 - EFHA1 chr13 22070299 - Exonic hg19 Non-Cancer 231N 2 In-Frame Inter-chr q13.4 126778 ChimerSeq FusionScan GSE122401 TUBGCP3-CTDP1 TUBGCP3 chr13 113242218 - CTDP1 chr18 77496354 + Exonic hg19 Non-Cancer 231N 2 Out-of-Frame Inter-chr 126779 ChimerSeq FusionScan GSE122401 YWHAG-BRI3 YWHAG chr7 75988038 - BRI3 chr7 97920422 + Exonic hg19 Non-Cancer 231N 2 Out-of-Frame Inter-chr q11.23 126780 ChimerSeq FusionScan GSE122401 ZNF71-ZNF382 ZNF71 chr19 57112959 + ZNF382 chr19 37100828 + Exonic hg19 Non-Cancer 231N 4 5'UTR-CDS Inter-chr Transcription factor q13.43 Tumor suppressor gene Transcription factor 126781 ChimerSeq FusionScan GSE122401 ARHGEF7-CRYL1 ARHGEF7 chr13 111806338 + CRYL1 chr13 20987526 - Exonic hg19 Non-Cancer 235N 7 In-Frame Inter-chr q34 126782 ChimerSeq FusionScan GSE122401 COL3A1-COL1A1 COL3A1 chr2 189863444 + COL1A1 chr17 48268851 - Exonic hg19 Non-Cancer 235N 31 In-Frame Inter-chr q32.2 Oncogene 126783 ChimerSeq FusionScan GSE122401 COX6B1-WHSC1L1 COX6B1 chr19 36139305 + WHSC1L1 chr8 38176458 - Exonic hg19 Non-Cancer 235N 2 5'UTR-CDS Inter-chr q13.12 Tumor suppressor gene 126784 ChimerSeq FusionScan GSE122401 CTR9-EIF4G2 CTR9 chr11 10776744 + EIF4G2 chr11 10819428 - Exonic hg19 Non-Cancer 235N 2 In-Frame Inter-chr p15.4 126785 ChimerSeq FusionScan GSE122401 DYRK1B-CNOT3 DYRK1B chr19 40324662 - CNOT3 chr19 54655962 + Exonic hg19 Non-Cancer 235N 2 5'UTR-CDS Inter-chr CMGC:DYRK Tumor suppressor gene 126786 ChimerSeq FusionScan GSE122401 EEF2-MAP2K2 EEF2 chr19 3985375 - MAP2K2 chr19 4090706 - Exonic hg19 Non-Cancer 235N 2 In-Frame Inter-chr p13.3 STE:STE7 Oncogene 126787 ChimerSeq FusionScan GSE122401 EXOC2-SMOC2 EXOC2 chr6 532468 - SMOC2 chr6 168999497 + Exonic hg19 Non-Cancer 235N 2 In-Frame Inter-chr p25.3 126788 ChimerSeq FusionScan GSE122401 EXOSC10-SON EXOSC10 chr1 11134287 - SON chr21 34945613 + Exonic hg19 Non-Cancer 235N 3 In-Frame Inter-chr p36.22 Transcription factor 126789 ChimerSeq FusionScan GSE122401 FAM18B1-FAM18B2-CDRT4 FAM18B1 chr17 18707579 + FAM18B2-CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer 235N 6 CDS-3'UTR Inter-chr 126790 ChimerSeq FusionScan GSE122401 GCNT2-FNBP4 GCNT2 chr6 10530069 + FNBP4 chr11 47786914 - Exonic hg19 Non-Cancer 235N 2 In-Frame Inter-chr p24.3 126791 ChimerSeq FusionScan GSE122401 MGC2752-IL9R MGC2752 chr19 59086955 + IL9R chrY 59337948 + Exonic hg19 Non-Cancer 235N 4 5'UTR-5'UTR Inter-chr 126792 ChimerSeq FusionScan GSE122401 NAPEPLD-ADD3 NAPEPLD chr7 102768929 - ADD3 chr10 111883774 + Exonic hg19 Non-Cancer 235N 2 In-Frame Inter-chr Tumor suppressor gene 126793 ChimerSeq FusionScan GSE122401 RUNX2-RUNX1 RUNX2 chr6 45390694 + RUNX1 chr21 36253010 - Exonic hg19 Non-Cancer 235N 21 In-Frame Inter-chr Tumor suppressor gene Transcription factor p21.1 Oncogene Tumor suppressor gene Transcription factor 126794 ChimerSeq FusionScan GSE122401 SNX2-LMAN2 SNX2 chr5 122110906 + LMAN2 chr5 176765606 - Exonic hg19 Non-Cancer 235N 5 In-Frame Inter-chr q23.2 126795 ChimerSeq FusionScan GSE122401 TTLL11-INVS TTLL11 chr9 124801550 - INVS chr9 103054607 + Exonic hg19 Non-Cancer 235N 2 In-Frame Inter-chr q33.2 126796 ChimerSeq FusionScan GSE122401 UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer 235N 10 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126797 ChimerSeq FusionScan GSE122401 ZDHHC17-C12orf26 ZDHHC17 chr12 77158109 + C12orf26 chr12 82824671 + Exonic hg19 Non-Cancer 235N 2 Out-of-Frame Inter-chr q21.2 126798 ChimerSeq FusionScan GSE122401 ZFAND3-BTBD9 ZFAND3 chr6 37897775 + BTBD9 chr6 38256237 - Exonic hg19 Non-Cancer 235N 2 In-Frame Inter-chr p21.2 126799 ChimerSeq FusionScan GSE122401 ZNF417-ZNF587B ZNF417 chr19 58427746 - ZNF587B chr19 58350390 + Exonic hg19 Non-Cancer 235N 9 In-Frame Inter-chr Transcription factor q13.43 Transcription factor 126800 ChimerSeq FusionScan GSE122401 ADAM9-ADAM28 ADAM9 chr8 38871562 + ADAM28 chr8 24168873 + Exonic hg19 Non-Cancer 2397N 16 In-Frame Inter-chr 126801 ChimerSeq FusionScan GSE122401 AFF1-U2SURP AFF1 chr4 87869723 + U2SURP chr3 142751625 + Exonic hg19 Non-Cancer 2397N 2 In-Frame Inter-chr Oncogene q21.3 126802 ChimerSeq FusionScan GSE122401 AKR1A1-SERBP1 AKR1A1 chr1 46016827 + SERBP1 chr1 67890906 - Exonic hg19 Non-Cancer 2397N 3 5'UTR-CDS Inter-chr p34.1 126803 ChimerSeq FusionScan GSE122401 ARHGAP27-LIMA1 ARHGAP27 chr17 43502929 - LIMA1 chr12 50642557 - Exonic hg19 Non-Cancer 2397N 3 5'UTR-5'UTR Inter-chr Tumor suppressor gene 126804 ChimerSeq FusionScan GSE122401 ARHGEF12-TOR1AIP2 ARHGEF12 chr11 120348235 + TOR1AIP2 chr1 179816771 - Exonic hg19 Non-Cancer 2397N 2 In-Frame Inter-chr Tumor suppressor gene q23.3 126805 ChimerSeq FusionScan GSE122401 ARNTL-DYM ARNTL chr11 13331606 + DYM chr18 46812986 - Exonic hg19 Non-Cancer 2397N 2 5'UTR-CDS Inter-chr Tumor suppressor gene Transcription factor p15.3 126806 ChimerSeq FusionScan GSE122401 ATP2A2-ATP2A3 ATP2A2 chr12 110777208 + ATP2A3 chr17 3844948 - Exonic hg19 Non-Cancer 2397N 31 In-Frame Inter-chr q24.11 126807 ChimerSeq FusionScan GSE122401 BIN3-NCOA5 BIN3 chr8 22526556 - NCOA5 chr20 44699175 - Exonic hg19 Non-Cancer 2397N 4 In-Frame Inter-chr p21.3 Tumor suppressor gene 126808 ChimerSeq FusionScan GSE122401 BTBD1-ETFA BTBD1 chr15 83725140 - ETFA chr15 76588078 - Exonic hg19 Non-Cancer 2397N 3 In-Frame Inter-chr q25.2 126809 ChimerSeq FusionScan GSE122401 C7orf44-PTPRN2 C7orf44 chr7 43769027 - PTPRN2 chr7 157931207 - Exonic hg19 Non-Cancer 2397N 2 5'UTR-CDS Inter-chr 126810 ChimerSeq FusionScan GSE122401 CAMK2D-CAMK2A CAMK2D chr4 114469812 - CAMK2A chr5 149636208 - Exonic hg19 Non-Cancer 2397N 5 Out-of-Frame Inter-chr q26 126811 ChimerSeq FusionScan GSE122401 CD300A-CD82 CD300A chr17 72462882 + CD82 chr11 44636821 + Exonic hg19 Non-Cancer 2397N 3 Out-of-Frame Inter-chr q25.1 Tumor suppressor gene 126812 ChimerSeq FusionScan GSE122401 CD58-CAPZA1 CD58 chr1 117113524 - CAPZA1 chr1 113189831 + Exonic hg19 Non-Cancer 2397N 2 Out-of-Frame Inter-chr p13.1 126813 ChimerSeq FusionScan GSE122401 CHMP3-MYH9 CHMP3 chr2 86790426 - MYH9 chr22 36685343 - Exonic hg19 Non-Cancer 2397N 2 In-Frame Inter-chr p11.2 Oncogene Tumor suppressor gene 126814 ChimerSeq FusionScan GSE122401 CNDP2-IMPA2 CNDP2 chr18 72163666 + IMPA2 chr18 11999052 + Exonic hg19 Non-Cancer 2397N 4 5'UTR-CDS Inter-chr Tumor suppressor gene q22.3 126815 ChimerSeq FusionScan GSE122401 CPQ-GNAS CPQ chr8 97657630 + GNAS chr20 57470666 + Exonic hg19 Non-Cancer 2397N 3 5'UTR-5'UTR Inter-chr q22.1 Oncogene 126816 ChimerSeq FusionScan GSE122401 CYSTM1-PFDN1 CYSTM1 chr5 139554870 + PFDN1 chr5 139661118 - Exonic hg19 Non-Cancer 2397N 9 5'UTR-CDS Inter-chr q31.3 126817 ChimerSeq FusionScan GSE122401 EPS15-FAF1 EPS15 chr1 51984870 - FAF1 chr1 51323669 - Exonic hg19 Non-Cancer 2397N 2 In-Frame Inter-chr p32.3 126818 ChimerSeq FusionScan GSE122401 FAM18B1-FAM18B2-CDRT4 FAM18B1 chr17 18707579 + FAM18B2-CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer 2397N 13 CDS-3'UTR Inter-chr 126819 ChimerSeq FusionScan GSE122401 FLNC-FLNA FLNC chr7 128497390 + FLNA chrX 153577933 - Exonic hg19 Non-Cancer 2397N 88 In-Frame Inter-chr q32.1 Tumor suppressor gene 126820 ChimerSeq FusionScan GSE122401 GKN2-GKN1 GKN2 chr2 69179981 - GKN1 chr2 69204626 + Exonic hg19 Non-Cancer 2397N 63 In-Frame Inter-chr Tumor suppressor gene p13.3 Tumor suppressor gene 126821 ChimerSeq FusionScan GSE122401 HBS1L-RWDD1 HBS1L chr6 135360710 - RWDD1 chr6 116901457 + Exonic hg19 Non-Cancer 2397N 2 In-Frame Inter-chr q23.3 126822 ChimerSeq FusionScan GSE122401 HNRNPK-PEPD HNRNPK chr9 86595067 - PEPD chr19 33954968 - Exonic hg19 Non-Cancer 2397N 3 5'UTR-CDS Inter-chr q21.32 126823 ChimerSeq FusionScan GSE122401 LARP1-CNOT8 LARP1 chr5 154191200 + CNOT8 chr5 154244751 + Exonic hg19 Non-Cancer 2397N 2 In-Frame Inter-chr q33.2 126824 ChimerSeq FusionScan GSE122401 LLGL2-SLC9A4 LLGL2 chr17 73560588 + SLC9A4 chr2 103142717 + Exonic hg19 Non-Cancer 2397N 9 Out-of-Frame Inter-chr q25.1 126825 ChimerSeq FusionScan GSE122401 LRP5-LRP1 LRP5 chr11 68115711 + LRP1 chr12 57592247 + Exonic hg19 Non-Cancer 2397N 18 In-Frame Inter-chr q13.2 126826 ChimerSeq FusionScan GSE122401 LRP5-LRP6 LRP5 chr11 68115711 + LRP6 chr12 12356334 - Exonic hg19 Non-Cancer 2397N 29 In-Frame Inter-chr q13.2 126827 ChimerSeq FusionScan GSE122401 MYH14-MYH9 MYH14 chr19 50783398 + MYH9 chr22 36689527 - Exonic hg19 Non-Cancer 2397N 25 In-Frame Inter-chr q13.33 Oncogene Tumor suppressor gene 126828 ChimerSeq FusionScan GSE122401 MYH9-MYH14 MYH9 chr22 36689804 - MYH14 chr19 50783487 + Exonic hg19 Non-Cancer 2397N 5 In-Frame Inter-chr Oncogene Tumor suppressor gene q12.3 126829 ChimerSeq FusionScan GSE122401 MYO10-HTATIP2 MYO10 chr5 16877717 - HTATIP2 chr11 20385782 + Exonic hg19 Non-Cancer 2397N 2 Out-of-Frame Inter-chr p15.1 Tumor suppressor gene 126830 ChimerSeq FusionScan GSE122401 NCOA1-YPEL5 NCOA1 chr2 24807429 + YPEL5 chr2 30379493 + Exonic hg19 Non-Cancer 2397N 6 5'UTR-5'UTR Inter-chr Oncogene Transcription factor p23.3 126831 ChimerSeq FusionScan GSE122401 NCOR2-UBC NCOR2 chr12 125051853 - UBC chr12 125398320 - Exonic hg19 Non-Cancer 2397N 4 5'UTR-5'UTR Inter-chr q24.31 126832 ChimerSeq FusionScan GSE122401 NECAP1-NECAP2 NECAP1 chr12 8242632 + NECAP2 chr1 16774364 + Exonic hg19 Non-Cancer 2397N 53 In-Frame Inter-chr p13.31 126833 ChimerSeq FusionScan GSE122401 NID1-NELL1 NID1 chr1 236187369 - NELL1 chr11 21555919 + Exonic hg19 Non-Cancer 2397N 28 In-Frame Inter-chr q42.3 126834 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60974099 + PGC chr6 41711127 - Exonic hg19 Non-Cancer 2397N 1285 In-Frame Inter-chr q12.2 126835 ChimerSeq FusionScan GSE122401 PGA4-CTSE PGA4 chr11 60990577 + CTSE chr1 206319100 + Exonic hg19 Non-Cancer 2397N 130 In-Frame Inter-chr q12.2 126836 ChimerSeq FusionScan GSE122401 PKN3-FAM214A PKN3 chr9 131465218 + FAM214A chr15 52970319 - Exonic hg19 Non-Cancer 2397N 2 CDS-5'UTR Inter-chr AGC:PKN q34.11 126837 ChimerSeq FusionScan GSE122401 PLAC8-HNRNPD PLAC8 chr4 84035818 - HNRNPD chr4 83279973 - Exonic hg19 Non-Cancer 2397N 3 5'UTR-CDS Inter-chr q21.22 126838 ChimerSeq FusionScan GSE122401 PPP2R5C-CHD2 PPP2R5C chr14 102229307 + CHD2 chr15 93467550 + Exonic hg19 Non-Cancer 2397N 2 Out-of-Frame Inter-chr Tumor suppressor gene q32.31 126839 ChimerSeq FusionScan GSE122401 PTRH2-CLTC PTRH2 chr17 57784731 - CLTC chr17 57751007 + Exonic hg19 Non-Cancer 2397N 10 5'UTR-CDS Inter-chr q23.1 126840 ChimerSeq FusionScan GSE122401 RAB2A-NCOA2 RAB2A chr8 61429812 + NCOA2 chr8 71209035 - Exonic hg19 Non-Cancer 2397N 2 CDS-5'UTR Inter-chr q12.1 Oncogene Transcription factor 126841 ChimerSeq FusionScan GSE122401 RCC1-SPECC1L RCC1 chr1 28834672 + SPECC1L chr22 24807555 + Exonic hg19 Non-Cancer 2397N 2 5'UTR-CDS Inter-chr p35.3 126842 ChimerSeq FusionScan GSE122401 RNF34-UBC RNF34 chr12 121838021 + UBC chr12 125398320 - Exonic hg19 Non-Cancer 2397N 2 5'UTR-5'UTR Inter-chr q24.31 126843 ChimerSeq FusionScan GSE122401 RUNX2-RUNX1 RUNX2 chr6 45390694 + RUNX1 chr21 36253010 - Exonic hg19 Non-Cancer 2397N 39 In-Frame Inter-chr Tumor suppressor gene Transcription factor p21.1 Oncogene Tumor suppressor gene Transcription factor 126844 ChimerSeq FusionScan GSE122401 SENP3-EIF4A1-MCM3AP SENP3-EIF4A1 chr17 7469081 + MCM3AP chr21 47693499 - Exonic hg19 Non-Cancer 2397N 4 CDS-3'UTR Inter-chr p13.1 126845 ChimerSeq FusionScan GSE122401 SERPINA3-DICER1 SERPINA3 chr14 95078784 + DICER1 chr14 95560493 - Exonic hg19 Non-Cancer 2397N 2 5'UTR-CDS Inter-chr q32.13 Oncogene Tumor suppressor gene 126846 ChimerSeq FusionScan GSE122401 SIK2-C11orf1 SIK2 chr11 111491126 + C11orf1 chr11 111754494 + Exonic hg19 Non-Cancer 2397N 2 In-Frame Inter-chr q23.1 126847 ChimerSeq FusionScan GSE122401 SLC35A1-EBAG9 SLC35A1 chr6 88216166 + EBAG9 chr8 110576667 + Exonic hg19 Non-Cancer 2397N 2 Out-of-Frame Inter-chr q15 126848 ChimerSeq FusionScan GSE122401 SMARCA2-SMARCA4 SMARCA2 chr9 2182242 + SMARCA4 chr19 11170428 + Exonic hg19 Non-Cancer 2397N 63 In-Frame Inter-chr Tumor suppressor gene p24.3 Oncogene Tumor suppressor gene 126849 ChimerSeq FusionScan GSE122401 SQSTM1-CANX SQSTM1 chr5 179238682 + CANX chr5 179132679 + Exonic hg19 Non-Cancer 2397N 2 5'UTR-5'UTR Inter-chr q35.3 126850 ChimerSeq FusionScan GSE122401 STX6-ABCD3 STX6 chr1 180991774 - ABCD3 chr1 94924162 + Exonic hg19 Non-Cancer 2397N 3 In-Frame Inter-chr q25.3 126851 ChimerSeq FusionScan GSE122401 TBC1D22A-VAPA TBC1D22A chr22 47308084 + VAPA chr18 9931806 + Exonic hg19 Non-Cancer 2397N 2 In-Frame Inter-chr q13.31 126852 ChimerSeq FusionScan GSE122401 TNFSF12-PI4KA TNFSF12 chr17 7454295 + PI4KA chr22 21068988 - Exonic hg19 Non-Cancer 2397N 2 In-Frame Inter-chr Tumor suppressor gene p13.1 126853 ChimerSeq FusionScan GSE122401 TPD52L2-DNAJC5 TPD52L2 chr20 62505169 + DNAJC5 chr20 62559687 + Exonic hg19 Non-Cancer 2397N 2 5'UTR-5'UTR Inter-chr q13.33 126854 ChimerSeq FusionScan GSE122401 USP28-ETS1 USP28 chr11 113746166 - ETS1 chr11 128360471 - Exonic hg19 Non-Cancer 2397N 4 Out-of-Frame Inter-chr q23.2 Oncogene Transcription factor 126855 ChimerSeq FusionScan GSE122401 ZFAND3-WRNIP1 ZFAND3 chr6 37787792 + WRNIP1 chr6 2779496 + Exonic hg19 Non-Cancer 2397N 2 In-Frame Inter-chr p21.2 126856 ChimerSeq FusionScan GSE122401 ZNF417-ZNF587B ZNF417 chr19 58427746 - ZNF587B chr19 58350390 + Exonic hg19 Non-Cancer 2397N 16 In-Frame Inter-chr Transcription factor q13.43 Transcription factor 126857 ChimerSeq FusionScan GSE122401 ZNF586-ZNF587B ZNF586 chr19 58288037 + ZNF587B chr19 58350390 + Exonic hg19 Non-Cancer 2397N 3 Out-of-Frame Inter-chr Transcription factor q13.43 Transcription factor 126858 ChimerSeq FusionScan GSE122401 ZNF596-FBXO25 ZNF596 chr8 182415 + FBXO25 chr8 381340 + Exonic hg19 Non-Cancer 2397N 3 5'UTR-5'UTR Inter-chr Transcription factor p23.3 Tumor suppressor gene 126859 ChimerSeq FusionScan GSE122401 ATXN7-RAD23B ATXN7 chr3 63884173 + RAD23B chr9 110062421 + Exonic hg19 Non-Cancer 257N 4 5'UTR-5'UTR Inter-chr p14.1 Tumor suppressor gene 126860 ChimerSeq FusionScan GSE122401 BTN3A3-BTN3A2 BTN3A3 chr6 26450361 + BTN3A2 chr6 26376024 + Exonic hg19 Non-Cancer 257N 11 CDS-3'UTR Inter-chr p22.2 126861 ChimerSeq FusionScan GSE122401 CCT3-SMG5 CCT3 chr1 156307944 - SMG5 chr1 156220787 - Exonic hg19 Non-Cancer 257N 2 Out-of-Frame Inter-chr q22 126862 ChimerSeq FusionScan GSE122401 CPSF3L-MYL6 CPSF3L chr1 1255835 - MYL6 chr12 56555170 + Exonic hg19 Non-Cancer 257N 2 Out-of-Frame Inter-chr 126863 ChimerSeq FusionScan GSE122401 E2F1-NECAB3 E2F1 chr20 32264910 - NECAB3 chr20 32260228 - Exonic hg19 Non-Cancer 257N 2 Out-of-Frame Inter-chr Tumor suppressor gene Transcription factor q11.22 126864 ChimerSeq FusionScan GSE122401 ENTPD4-LOXL2 ENTPD4 chr8 23291829 - LOXL2 chr8 23225947 - Exonic hg19 Non-Cancer 257N 2 CDS-5'UTR Inter-chr p21.3 126865 ChimerSeq FusionScan GSE122401 FMNL2-TNFAIP3 FMNL2 chr2 153192234 + TNFAIP3 chr6 138192349 + Exonic hg19 Non-Cancer 257N 2 CDS-5'UTR Inter-chr q23.3 Oncogene Tumor suppressor gene 126866 ChimerSeq FusionScan GSE122401 HLA-F-AS1-MICA HLA-F-AS1 chr6 29716676 - MICA chr6 31378319 + Exonic hg19 Non-Cancer 257N 13 Out-of-Frame Inter-chr 126867 ChimerSeq FusionScan GSE122401 HMGA1-ARIH2 HMGA1 chr6 34211295 + ARIH2 chr3 49019092 + Exonic hg19 Non-Cancer 257N 2 In-Frame Inter-chr Transcription factor p21.31 126868 ChimerSeq FusionScan GSE122401 KDM5C-KDM5D KDM5C chrX 53225867 - KDM5D chrY 21870899 - Exonic hg19 Non-Cancer 257N 57 In-Frame Inter-chr Oncogene p11.22 126869 ChimerSeq FusionScan GSE122401 LINC00152-CHMP3 LINC00152 chr2 87755164 + CHMP3 chr2 86769435 - Exonic hg19 Non-Cancer 257N 2 5'UTR-CDS Inter-chr 126870 ChimerSeq FusionScan GSE122401 LMBR1-RBM33 LMBR1 chr7 156685621 - RBM33 chr7 155457868 + Exonic hg19 Non-Cancer 257N 2 Out-of-Frame Inter-chr q36.3 126871 ChimerSeq FusionScan GSE122401 MGAT4A-MGAT4B MGAT4A chr2 99261890 - MGAT4B chr5 179226636 - Exonic hg19 Non-Cancer 257N 51 In-Frame Inter-chr q11.2 126872 ChimerSeq FusionScan GSE122401 MGA-GNAS MGA chr15 41952723 + GNAS chr20 57470666 + Exonic hg19 Non-Cancer 257N 2 5'UTR-5'UTR Inter-chr Transcription factor q15.1 Oncogene 126873 ChimerSeq FusionScan GSE122401 MGC2752-IL9R MGC2752 chr19 59086955 + IL9R chrY 59337948 + Exonic hg19 Non-Cancer 257N 2 5'UTR-5'UTR Inter-chr 126874 ChimerSeq FusionScan GSE122401 MRS2-CTSC MRS2 chr6 24405469 + CTSC chr11 88045722 - Exonic hg19 Non-Cancer 257N 2 In-Frame Inter-chr p22.3 126875 ChimerSeq FusionScan GSE122401 MTAP-SYTL2 MTAP chr9 21854869 + SYTL2 chr11 85469157 - Exonic hg19 Non-Cancer 257N 5 CDS-5'UTR Inter-chr Tumor suppressor gene p21.3 126876 ChimerSeq FusionScan GSE122401 MUC13-MAP3K13 MUC13 chr3 124653504 - MAP3K13 chr3 185003304 + Exonic hg19 Non-Cancer 257N 2 CDS-5'UTR Inter-chr q21.2 126877 ChimerSeq FusionScan GSE122401 NCOR2-UBC NCOR2 chr12 125051853 - UBC chr12 125398320 - Exonic hg19 Non-Cancer 257N 4 5'UTR-5'UTR Inter-chr q24.31 126878 ChimerSeq FusionScan GSE122401 NUMB-UIMC1 NUMB chr14 73925198 - UIMC1 chr5 176338390 - Exonic hg19 Non-Cancer 257N 2 5'UTR-CDS Inter-chr Tumor suppressor gene q24.3 Tumor suppressor gene 126879 ChimerSeq FusionScan GSE122401 OAS2-OAS1 OAS2 chr12 113447045 + OAS1 chr12 113354313 + Exonic hg19 Non-Cancer 257N 2 In-Frame Inter-chr q24.13 126880 ChimerSeq FusionScan GSE122401 PAPSS1-MANBA PAPSS1 chr4 108565957 - MANBA chr4 103635718 - Exonic hg19 Non-Cancer 257N 2 In-Frame Inter-chr q25 126881 ChimerSeq FusionScan GSE122401 PDIA6-JUP PDIA6 chr2 10952803 - JUP chr17 39928114 - Exonic hg19 Non-Cancer 257N 2 CDS-5'UTR Inter-chr p25.1 Tumor suppressor gene 126882 ChimerSeq FusionScan GSE122401 PLXNA1-CCNB1 PLXNA1 chr3 126725021 + CCNB1 chr5 68463734 + Exonic hg19 Non-Cancer 257N 3 Out-of-Frame Inter-chr q21.3 126883 ChimerSeq FusionScan GSE122401 POM121C-ADCK4 POM121C chr7 75103969 - ADCK4 chr19 41201959 - Exonic hg19 Non-Cancer 257N 3 5'UTR-CDS Inter-chr q11.23 Atypical:ABC1 126884 ChimerSeq FusionScan GSE122401 PPFIA1-CTTN PPFIA1 chr11 70118542 + CTTN chr11 70251370 + Exonic hg19 Non-Cancer 257N 2 5'UTR-5'UTR Inter-chr q13.3 126885 ChimerSeq FusionScan GSE122401 PRELID2-LRBA PRELID2 chr5 145197456 - LRBA chr4 151412187 - Exonic hg19 Non-Cancer 257N 22 Out-of-Frame Inter-chr q32 126886 ChimerSeq FusionScan GSE122401 PRELID2-LRBA PRELID2 chr5 145214739 - LRBA chr4 151412187 - Exonic hg19 Non-Cancer 257N 5 In-Frame Inter-chr q32 126887 ChimerSeq FusionScan GSE122401 PTRH2-CLTC PTRH2 chr17 57784731 - CLTC chr17 57751007 + Exonic hg19 Non-Cancer 257N 9 5'UTR-CDS Inter-chr q23.1 126888 ChimerSeq FusionScan GSE122401 RNF139-NDUFB9 RNF139 chr8 125487531 + NDUFB9 chr8 125555327 + Exonic hg19 Non-Cancer 257N 2 Out-of-Frame Inter-chr q24.13 126889 ChimerSeq FusionScan GSE122401 SAA2-SAA4-SAA1 SAA2-SAA4 chr11 18267456 - SAA1 chr11 18288430 + Exonic hg19 Non-Cancer 257N 6 CDS-5'UTR Inter-chr Tumor suppressor gene p15.1 126890 ChimerSeq FusionScan GSE122401 SEPT2-DCTN4 SEPT2 chr2 242263656 + DCTN4 chr5 150102542 - Exonic hg19 Non-Cancer 257N 2 In-Frame Inter-chr q37.3 126891 ChimerSeq FusionScan GSE122401 SMAGP-USP14 SMAGP chr12 51663028 - USP14 chr18 178932 + Exonic hg19 Non-Cancer 257N 2 Out-of-Frame Inter-chr q13.13 126892 ChimerSeq FusionScan GSE122401 SRP9-EPHX1 SRP9 chr1 225965714 + EPHX1 chr1 226016425 + Exonic hg19 Non-Cancer 257N 3 CDS-5'UTR Inter-chr q42.12 126893 ChimerSeq FusionScan GSE122401 ST20-BCL2A1 ST20 chr15 80206929 - BCL2A1 chr15 80253516 - Exonic hg19 Non-Cancer 257N 2 5'UTR-CDS Inter-chr Tumor suppressor gene q25.1 126894 ChimerSeq FusionScan GSE122401 TBC1D8-SCN7A TBC1D8 chr2 101643844 - SCN7A chr2 167304218 - Exonic hg19 Non-Cancer 257N 5 In-Frame Inter-chr q11.2 126895 ChimerSeq FusionScan GSE122401 TRIM52-FAM21C TRIM52 chr5 180687001 - FAM21C chr10 46222864 + Exonic hg19 Non-Cancer 257N 2 In-Frame Inter-chr q35.3 126896 ChimerSeq FusionScan GSE122401 TTC39B-UBQLN1 TTC39B chr9 15267911 - UBQLN1 chr9 86281348 - Exonic hg19 Non-Cancer 257N 2 Out-of-Frame Inter-chr p22.3 126897 ChimerSeq FusionScan GSE122401 ZC3H11A-TMCO1 ZC3H11A chr1 203800899 + TMCO1 chr1 165712548 - Exonic hg19 Non-Cancer 257N 2 Out-of-Frame Inter-chr q32.1 126898 ChimerSeq FusionScan GSE122401 ZNF850-DDTL ZNF850 chr19 37263626 - DDTL chr22 24313474 + Exonic hg19 Non-Cancer 257N 2 5'UTR-CDS Inter-chr Transcription factor q13.12 126899 ChimerSeq FusionScan GSE122401 A4GALT-CYB5R3 A4GALT chr22 43116802 - CYB5R3 chr22 43032852 - Exonic hg19 Non-Cancer 265N 2 5'UTR-5'UTR Inter-chr q13.2 126900 ChimerSeq FusionScan GSE122401 ARMCX5-RERE ARMCX5 chrX 101854775 + RERE chr1 8426034 - Exonic hg19 Non-Cancer 265N 2 5'UTR-5'UTR Inter-chr q22.1 126901 ChimerSeq FusionScan GSE122401 ATL2-FBXO32 ATL2 chr2 38604284 - FBXO32 chr8 124547054 - Exonic hg19 Non-Cancer 265N 7 Out-of-Frame Inter-chr p22.1 Tumor suppressor gene 126902 ChimerSeq FusionScan GSE122401 C12orf57-HABP4 C12orf57 chr12 7053336 + HABP4 chr9 99220660 + Exonic hg19 Non-Cancer 265N 3 In-Frame Inter-chr p13.31 126903 ChimerSeq FusionScan GSE122401 CNN1-CNN2 CNN1 chr19 11658722 + CNN2 chr19 1036414 + Exonic hg19 Non-Cancer 265N 378 In-Frame Inter-chr Tumor suppressor gene p13.2 126904 ChimerSeq FusionScan GSE122401 DEK-NR1D2 DEK chr6 18236682 - NR1D2 chr3 24018713 + Exonic hg19 Non-Cancer 265N 4 Out-of-Frame Inter-chr Oncogene p22.3 Transcription factor 126905 ChimerSeq FusionScan GSE122401 DES-ADH5 DES chr2 220288542 + ADH5 chr4 99993862 - Exonic hg19 Non-Cancer 265N 25 In-Frame Inter-chr q35 126906 ChimerSeq FusionScan GSE122401 DYNLL1-MYLK DYNLL1 chr12 120934356 + MYLK chr3 123339183 - Exonic hg19 Non-Cancer 265N 3 In-Frame Inter-chr q24.31 126907 ChimerSeq FusionScan GSE122401 FBXL19-ORAI2 FBXL19 chr16 30958269 + ORAI2 chr7 102086959 + Exonic hg19 Non-Cancer 265N 4 Out-of-Frame Inter-chr Transcription factor p11.2 126908 ChimerSeq FusionScan GSE122401 FBXL5-RTN4 FBXL5 chr4 15613888 - RTN4 chr2 55214834 - Exonic hg19 Non-Cancer 265N 2 In-Frame Inter-chr p15.32 Tumor suppressor gene 126909 ChimerSeq FusionScan GSE122401 FOSL2-P4HB FOSL2 chr2 28631733 + P4HB chr17 79801968 - Exonic hg19 Non-Cancer 265N 16 In-Frame Inter-chr Transcription factor p23.2 126910 ChimerSeq FusionScan GSE122401 FOXO3-LINC00222 FOXO3 chr6 108986092 + LINC00222 chr6 109080620 + Exonic hg19 Non-Cancer 265N 4 3'UTR-5'UTR Inter-chr Oncogene Tumor suppressor gene Transcription factor q21 126911 ChimerSeq FusionScan GSE122401 GTF2IRD2B-RBM39 GTF2IRD2B chr7 74542186 + RBM39 chr20 34320057 - Exonic hg19 Non-Cancer 265N 2 Out-of-Frame Inter-chr Transcription factor q11.23 126912 ChimerSeq FusionScan GSE122401 KHSRP-FUBP1 KHSRP chr19 6420432 - FUBP1 chr1 78432639 - Exonic hg19 Non-Cancer 265N 40 In-Frame Inter-chr p13.3 Oncogene 126913 ChimerSeq FusionScan GSE122401 MYH11-MYH14 MYH11 chr16 15876241 - MYH14 chr19 50730159 + Exonic hg19 Non-Cancer 265N 393 In-Frame Inter-chr Oncogene 126914 ChimerSeq FusionScan GSE122401 NBPF3-NBPF15 NBPF3 chr1 21766841 + NBPF15 chr1 148560846 + Exonic hg19 Non-Cancer 265N 5 5'UTR-5'UTR Inter-chr p36.12 126915 ChimerSeq FusionScan GSE122401 NDE1-MYH11 NDE1 chr16 15790717 + MYH11 chr16 15797980 - Exonic hg19 Non-Cancer 265N 2 In-Frame Inter-chr p13.11 Oncogene 126916 ChimerSeq FusionScan GSE122401 PAQR5-DMD PAQR5 chr15 69629840 + DMD chrX 33038317 - Exonic hg19 Non-Cancer 265N 3 5'UTR-5'UTR Inter-chr q23 Tumor suppressor gene 126917 ChimerSeq FusionScan GSE122401 PRKCE-SOCS5 PRKCE chr2 46237656 + SOCS5 chr2 46985657 + Exonic hg19 Non-Cancer 265N 2 CDS-5'UTR Inter-chr Tumor suppressor gene p21 126918 ChimerSeq FusionScan GSE122401 RECK-KDM4C RECK chr9 36065621 + KDM4C chr9 6980924 + Exonic hg19 Non-Cancer 265N 2 In-Frame Inter-chr Tumor suppressor gene p13.3 126919 ChimerSeq FusionScan GSE122401 SMEK2-CCDC88A SMEK2 chr2 55785910 - CCDC88A chr2 55646052 - Exonic hg19 Non-Cancer 265N 2 In-Frame Inter-chr 126920 ChimerSeq FusionScan GSE122401 SOX5-CPQ SOX5 chr12 24715266 - CPQ chr8 98078236 + Exonic hg19 Non-Cancer 265N 2 5'UTR-CDS Inter-chr Transcription factor p12.1 126921 ChimerSeq FusionScan GSE122401 TPM2-ACTG1 TPM2 chr9 35685060 - ACTG1 chr17 79478652 - Exonic hg19 Non-Cancer 265N 3 In-Frame Inter-chr p13.3 126922 ChimerSeq FusionScan GSE122401 TRIP12-CAB39 TRIP12 chr2 230786595 - CAB39 chr2 231624673 + Exonic hg19 Non-Cancer 265N 2 5'UTR-5'UTR Inter-chr q36.3 126923 ChimerSeq FusionScan GSE122401 UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer 265N 9 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126924 ChimerSeq FusionScan GSE122401 ACTN4-ACTN1 ACTN4 chr19 39215205 + ACTN1 chr14 69347706 - Exonic hg19 Non-Cancer 267N 89 In-Frame Inter-chr 126925 ChimerSeq FusionScan GSE122401 AP5Z1-MSTO1 AP5Z1 chr7 4821385 + MSTO1 chr1 155583252 + Exonic hg19 Non-Cancer 267N 2 Out-of-Frame Inter-chr p22.1 126926 ChimerSeq FusionScan GSE122401 BBS9-PHF14 BBS9 chr7 33573788 + PHF14 chr7 11150976 + Exonic hg19 Non-Cancer 267N 2 CDS-5'UTR Inter-chr p14.3 126927 ChimerSeq FusionScan GSE122401 FAM162B-ZUFSP FAM162B chr6 117083139 - ZUFSP chr6 116988370 - Exonic hg19 Non-Cancer 267N 2 CDS-5'UTR Inter-chr q22.1 Transcription factor 126928 ChimerSeq FusionScan GSE122401 FAM193B-DTYMK FAM193B chr5 176963358 - DTYMK chr2 242619734 - Exonic hg19 Non-Cancer 267N 2 In-Frame Inter-chr q35.3 126929 ChimerSeq FusionScan GSE122401 FBXW2-DHX29 FBXW2 chr9 123555426 - DHX29 chr5 54577343 - Exonic hg19 Non-Cancer 267N 2 5'UTR-CDS Inter-chr q33.2 126930 ChimerSeq FusionScan GSE122401 GKN2-GKN1 GKN2 chr2 69179981 - GKN1 chr2 69204626 + Exonic hg19 Non-Cancer 267N 31 In-Frame Inter-chr Tumor suppressor gene p13.3 Tumor suppressor gene 126931 ChimerSeq FusionScan GSE122401 GPX3-GPX6 GPX3 chr5 150405054 + GPX6 chr6 28474206 - Exonic hg19 Non-Cancer 267N 29 In-Frame Inter-chr Tumor suppressor gene q33.1 126932 ChimerSeq FusionScan GSE122401 HACL1-COLQ HACL1 chr3 15604864 - COLQ chr3 15531144 - Exonic hg19 Non-Cancer 267N 2 Out-of-Frame Inter-chr p25.1 126933 ChimerSeq FusionScan GSE122401 LAMA5-RPS21 LAMA5 chr20 60900371 - RPS21 chr20 60962898 + Exonic hg19 Non-Cancer 267N 2 CDS-3'UTR Inter-chr q13.33 126934 ChimerSeq FusionScan GSE122401 MGC2752-IL9R MGC2752 chr19 59086955 + IL9R chrY 59337948 + Exonic hg19 Non-Cancer 267N 5 5'UTR-5'UTR Inter-chr 126935 ChimerSeq FusionScan GSE122401 NKX6-2-ALX3 NKX6-2 chr10 134598783 - ALX3 chr1 110604185 - Exonic hg19 Non-Cancer 267N 19 Out-of-Frame Inter-chr q26.3 126936 ChimerSeq FusionScan GSE122401 ORMDL1-PCBP2 ORMDL1 chr2 190648994 - PCBP2 chr12 53854798 + Exonic hg19 Non-Cancer 267N 2 5'UTR-CDS Inter-chr q32.2 126937 ChimerSeq FusionScan GSE122401 PGA3-COL4A1 PGA3 chr11 60971092 + COL4A1 chr13 110861774 - Exonic hg19 Non-Cancer 267N 3 Out-of-Frame Inter-chr q12.2 126938 ChimerSeq FusionScan GSE122401 PGA3-CTSE PGA3 chr11 60971741 + CTSE chr1 206319100 + Exonic hg19 Non-Cancer 267N 19 In-Frame Inter-chr q12.2 126939 ChimerSeq FusionScan GSE122401 PGA3-NADK PGA3 chr11 60977430 + NADK chr1 1684499 - Exonic hg19 Non-Cancer 267N 5 In-Frame Inter-chr q12.2 126940 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60971741 + PGC chr6 41712252 - Exonic hg19 Non-Cancer 267N 3 In-Frame Inter-chr q12.2 126941 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60974099 + PGC chr6 41711127 - Exonic hg19 Non-Cancer 267N 98 In-Frame Inter-chr q12.2 126942 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60975962 + PGC chr6 41708348 - Exonic hg19 Non-Cancer 267N 49 In-Frame Inter-chr q12.2 126943 ChimerSeq FusionScan GSE122401 PGA4-CTSE PGA4 chr11 60990577 + CTSE chr1 206319100 + Exonic hg19 Non-Cancer 267N 64 In-Frame Inter-chr q12.2 126944 ChimerSeq FusionScan GSE122401 PGA4-PGC PGA4 chr11 60990577 + PGC chr6 41712252 - Exonic hg19 Non-Cancer 267N 7 In-Frame Inter-chr q12.2 126945 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41710027 - PGA3 chr11 60977313 + Exonic hg19 Non-Cancer 267N 34 In-Frame Inter-chr p21.1 126946 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41712134 - PGA3 chr11 60974968 + Exonic hg19 Non-Cancer 267N 172 In-Frame Inter-chr p21.1 126947 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41712395 - PGA3 chr11 60973981 + Exonic hg19 Non-Cancer 267N 11 In-Frame Inter-chr p21.1 126948 ChimerSeq FusionScan GSE122401 PGC-PGA5 PGC chr6 41712395 - PGA5 chr11 61011636 + Exonic hg19 Non-Cancer 267N 20 In-Frame Inter-chr p21.1 126949 ChimerSeq FusionScan GSE122401 PTPN2-KLHL24 PTPN2 chr18 12884071 - KLHL24 chr3 183361267 + Exonic hg19 Non-Cancer 267N 2 CDS-5'UTR Inter-chr Tumor suppressor gene p11.21 126950 ChimerSeq FusionScan GSE122401 RBM47-CTBP1 RBM47 chr4 40631412 - CTBP1 chr4 1235307 - Exonic hg19 Non-Cancer 267N 2 5'UTR-5'UTR Inter-chr p14 126951 ChimerSeq FusionScan GSE122401 RFC1-ADRA1A RFC1 chr4 39367858 - ADRA1A chr8 26606265 - Exonic hg19 Non-Cancer 267N 2 In-Frame Inter-chr p14 126952 ChimerSeq FusionScan GSE122401 RPP14-LIPF RPP14 chr3 58296318 + LIPF chr10 90438201 + Exonic hg19 Non-Cancer 267N 4 In-Frame Inter-chr p14.3 126953 ChimerSeq FusionScan GSE122401 SLC9A3R2-SHANK1 SLC9A3R2 chr16 2086504 + SHANK1 chr19 51191315 - Exonic hg19 Non-Cancer 267N 28 In-Frame Inter-chr p13.3 126954 ChimerSeq FusionScan GSE122401 TOX-TOX3 TOX chr8 59739380 - TOX3 chr16 52473880 - Exonic hg19 Non-Cancer 267N 7 Out-of-Frame Inter-chr q12.1 126955 ChimerSeq FusionScan GSE122401 ANAPC5-SRRM2 ANAPC5 chr12 121766118 - SRRM2 chr16 2808985 + Exonic hg19 Non-Cancer 269N 2 In-Frame Inter-chr q24.31 126956 ChimerSeq FusionScan GSE122401 B2M-ZNF503-AS2 B2M chr15 45003811 + ZNF503-AS2 chr10 77167012 + Exonic hg19 Non-Cancer 269N 2 CDS-5'UTR Inter-chr Oncogene Transcription factor 126957 ChimerSeq FusionScan GSE122401 CALR-RRBP1 CALR chr19 13051701 + RRBP1 chr20 17599324 - Exonic hg19 Non-Cancer 269N 2 In-Frame Inter-chr p13.13 126958 ChimerSeq FusionScan GSE122401 EIF2AK3-DARS EIF2AK3 chr2 88926484 - DARS chr2 136701050 - Exonic hg19 Non-Cancer 269N 2 In-Frame Inter-chr p11.2 126959 ChimerSeq FusionScan GSE122401 EPB41L2-EPB41L3 EPB41L2 chr6 131188598 - EPB41L3 chr18 5395706 - Exonic hg19 Non-Cancer 269N 23 In-Frame Inter-chr q23.2 Tumor suppressor gene 126960 ChimerSeq FusionScan GSE122401 FGF7-KGFLP1 FGF7 chr15 49716780 + KGFLP1 chr9 46744176 + Exonic hg19 Non-Cancer 269N 22 CDS-5'UTR Inter-chr q21.2 126961 ChimerSeq FusionScan GSE122401 GMNN-RPLP0 GMNN chr6 24780968 + RPLP0 chr12 120635265 - Exonic hg19 Non-Cancer 269N 2 In-Frame Inter-chr p22.3 126962 ChimerSeq FusionScan GSE122401 GOLGA2-GOLGA8C GOLGA2 chr9 131019879 - GOLGA8C chr15 20777641 + Exonic hg19 Non-Cancer 269N 61 CDS-5'UTR Inter-chr q34.11 126963 ChimerSeq FusionScan GSE122401 HNRNPH1-HNRNPH3 HNRNPH1 chr5 179046269 - HNRNPH3 chr10 70098259 + Exonic hg19 Non-Cancer 269N 50 In-Frame Inter-chr q35.3 126964 ChimerSeq FusionScan GSE122401 HTT-B2M HTT chr4 3240336 + B2M chr15 45007620 + Exonic hg19 Non-Cancer 269N 6 Out-of-Frame Inter-chr p16.3 Oncogene 126965 ChimerSeq FusionScan GSE122401 LMBR1-C7orf53 LMBR1 chr7 156549086 - C7orf53 chr7 112124866 + Exonic hg19 Non-Cancer 269N 2 CDS-5'UTR Inter-chr q36.3 126966 ChimerSeq FusionScan GSE122401 LRP5-LRP1 LRP5 chr11 68115711 + LRP1 chr12 57592247 + Exonic hg19 Non-Cancer 269N 16 In-Frame Inter-chr q13.2 126967 ChimerSeq FusionScan GSE122401 MSH3-ZDHHC17 MSH3 chr5 80088663 + ZDHHC17 chr12 77199096 + Exonic hg19 Non-Cancer 269N 2 Out-of-Frame Inter-chr q14.1 126968 ChimerSeq FusionScan GSE122401 MTMR3-SNRPD3 MTMR3 chr22 30279348 + SNRPD3 chr22 24963951 + Exonic hg19 Non-Cancer 269N 2 5'UTR-CDS Inter-chr q12.2 126969 ChimerSeq FusionScan GSE122401 RFX3-LSM6 RFX3 chr9 3525746 - LSM6 chr4 147104063 + Exonic hg19 Non-Cancer 269N 2 5'UTR-5'UTR Inter-chr Transcription factor p24.2 126970 ChimerSeq FusionScan GSE122401 SLC25A15-ATP1B1 SLC25A15 chr13 41367417 + ATP1B1 chr1 169094121 + Exonic hg19 Non-Cancer 269N 9 In-Frame Inter-chr q14.11 126971 ChimerSeq FusionScan GSE122401 SULT1C2-ANXA4 SULT1C2 chr2 108910810 + ANXA4 chr2 70045730 + Exonic hg19 Non-Cancer 269N 2 CDS-5'UTR Inter-chr q12.3 126972 ChimerSeq FusionScan GSE122401 TCF7-VDAC1 TCF7 chr5 133451724 + VDAC1 chr5 133328709 - Exonic hg19 Non-Cancer 269N 2 CDS-5'UTR Inter-chr Transcription factor q31.1 126973 ChimerSeq FusionScan GSE122401 TPD52L2-DNAJC5 TPD52L2 chr20 62505169 + DNAJC5 chr20 62559687 + Exonic hg19 Non-Cancer 269N 3 5'UTR-5'UTR Inter-chr q13.33 126974 ChimerSeq FusionScan GSE122401 UQCRC2-SRSF7 UQCRC2 chr16 21987564 + SRSF7 chr2 38973889 - Exonic hg19 Non-Cancer 269N 2 In-Frame Inter-chr 126975 ChimerSeq FusionScan GSE122401 UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer 269N 8 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 126976 ChimerSeq FusionScan GSE122401 WLS-DIRAS3 WLS chr1 68603462 - DIRAS3 chr1 68513045 - Exonic hg19 Non-Cancer 269N 2 CDS-5'UTR Inter-chr p31.3 Tumor suppressor gene 126977 ChimerSeq FusionScan GSE122401 ZMYND8-SEP15 ZMYND8 chr20 45918930 - 2019_ 9_ 15_ chr1 87333785 - Exonic hg19 Non-Cancer 269N 2 In-Frame Inter-chr q13.12 126978 ChimerSeq FusionScan GSE122401 ZNF20-ZNF788 ZNF20 chr19 12246314 - ZNF788 chr19 12222060 + Exonic hg19 Non-Cancer 269N 3 CDS-5'UTR Inter-chr Transcription factor p13.2 Transcription factor 126979 ChimerSeq FusionScan GSE122401 ZNF417-ZNF587B ZNF417 chr19 58427746 - ZNF587B chr19 58350390 + Exonic hg19 Non-Cancer 269N 7 In-Frame Inter-chr Transcription factor q13.43 Transcription factor 126980 ChimerSeq FusionScan GSE122401 ACTN4-ACTN1 ACTN4 chr19 39215205 + ACTN1 chr14 69347706 - Exonic hg19 Non-Cancer 271N 211 In-Frame Inter-chr 126981 ChimerSeq FusionScan GSE122401 ANKRD36-ANKRD36B ANKRD36 chr2 97877478 + ANKRD36B chr2 98167943 - Exonic hg19 Non-Cancer 271N 6 Out-of-Frame Inter-chr q11.2 126982 ChimerSeq FusionScan GSE122401 APP-MYL12B APP chr21 27347382 - MYL12B chr18 3272881 + Exonic hg19 Non-Cancer 271N 2 CDS-5'UTR Inter-chr q21.3 126983 ChimerSeq FusionScan GSE122401 BAIAP2L1-BAG1 BAIAP2L1 chr7 97984353 - BAG1 chr9 33262828 - Exonic hg19 Non-Cancer 271N 6 In-Frame Inter-chr q22.1 126984 ChimerSeq FusionScan GSE122401 BTN3A3-BTN3A2 BTN3A3 chr6 26450361 + BTN3A2 chr6 26376024 + Exonic hg19 Non-Cancer 271N 11 CDS-3'UTR Inter-chr p22.2 126985 ChimerSeq FusionScan GSE122401 CASP6-SEC24B CASP6 chr4 110624511 - SEC24B chr4 110451444 + Exonic hg19 Non-Cancer 271N 2 In-Frame Inter-chr q25 126986 ChimerSeq FusionScan GSE122401 COPB2-CA2 COPB2 chr3 139108389 - CA2 chr8 86388026 + Exonic hg19 Non-Cancer 271N 2 In-Frame Inter-chr q23 126987 ChimerSeq FusionScan GSE122401 DKC1-GOLM1 DKC1 chrX 154004599 + GOLM1 chr9 88655783 - Exonic hg19 Non-Cancer 271N 2 Out-of-Frame Inter-chr q28 126988 ChimerSeq FusionScan GSE122401 ENTPD1-FRA10AC1 ENTPD1 chr10 97516012 + FRA10AC1 chr10 95454694 - Exonic hg19 Non-Cancer 271N 5 Out-of-Frame Inter-chr q24.1 126989 ChimerSeq FusionScan GSE122401 FOXP1-SLMAP FOXP1 chr3 71542576 - SLMAP chr3 57817109 + Exonic hg19 Non-Cancer 271N 2 5'UTR-CDS Inter-chr Oncogene Tumor suppressor gene Transcription factor p13 126990 ChimerSeq FusionScan GSE122401 GKN2-GKN1 GKN2 chr2 69179981 - GKN1 chr2 69204626 + Exonic hg19 Non-Cancer 271N 2 In-Frame Inter-chr Tumor suppressor gene p13.3 Tumor suppressor gene 126991 ChimerSeq FusionScan GSE122401 LGALS3-CYSTM1 LGALS3 chr14 55596018 + CYSTM1 chr5 139574030 + Exonic hg19 Non-Cancer 271N 25 5'UTR-5'UTR Inter-chr q22.3 126992 ChimerSeq FusionScan GSE122401 LTBP4-CRELD1 LTBP4 chr19 41117300 + CRELD1 chr3 9985064 + Exonic hg19 Non-Cancer 271N 7 In-Frame Inter-chr q13.2 126993 ChimerSeq FusionScan GSE122401 LYPD6B-ACVR1 LYPD6B chr2 149895315 + ACVR1 chr2 158675071 - Exonic hg19 Non-Cancer 271N 2 5'UTR-5'UTR Inter-chr q23.2 126994 ChimerSeq FusionScan GSE122401 MAMDC2-C9orf80 MAMDC2 chr9 72785547 + C9orf80 chr9 115456513 - Exonic hg19 Non-Cancer 271N 3 In-Frame Inter-chr q21.12 126995 ChimerSeq FusionScan GSE122401 MANBAL-SRC MANBAL chr20 35929816 + SRC chr20 35993606 + Exonic hg19 Non-Cancer 271N 3 CDS-5'UTR Inter-chr q11.23 TK:Src Oncogene 126996 ChimerSeq FusionScan GSE122401 MOSPD2-UHRF2 MOSPD2 chrX 14891880 + UHRF2 chr9 6504592 + Exonic hg19 Non-Cancer 271N 2 Out-of-Frame Inter-chr p22.2 Tumor suppressor gene 126997 ChimerSeq FusionScan GSE122401 ORAI3-ORAI2 ORAI3 chr16 30960838 + ORAI2 chr7 102086959 + Exonic hg19 Non-Cancer 271N 46 In-Frame Inter-chr p11.2 126998 ChimerSeq FusionScan GSE122401 OSTC-PSAP OSTC chr4 109571950 + PSAP chr10 73594262 - Exonic hg19 Non-Cancer 271N 2 In-Frame Inter-chr q25 126999 ChimerSeq FusionScan GSE122401 PCNP-PVRL3 PCNP chr3 101293123 + PVRL3 chr3 110830876 + Exonic hg19 Non-Cancer 271N 2 In-Frame Inter-chr q12.3 127000 ChimerSeq FusionScan GSE122401 RABAC1-BLVRB RABAC1 chr19 42461169 - BLVRB chr19 40964452 - Exonic hg19 Non-Cancer 271N 2 In-Frame Inter-chr q13.2 127001 ChimerSeq FusionScan GSE122401 RNF125-ALDH1A1 RNF125 chr18 29625695 + ALDH1A1 chr9 75520948 - Exonic hg19 Non-Cancer 271N 2 Out-of-Frame Inter-chr q12.1 127002 ChimerSeq FusionScan GSE122401 SIAH2-RNF13 SIAH2 chr3 150480219 - RNF13 chr3 149638920 + Exonic hg19 Non-Cancer 271N 2 In-Frame Inter-chr q25.1 127003 ChimerSeq FusionScan GSE122401 SLC25A12-ITGA6 SLC25A12 chr2 172749714 - ITGA6 chr2 173333852 + Exonic hg19 Non-Cancer 271N 2 In-Frame Inter-chr q31.1 127004 ChimerSeq FusionScan GSE122401 TMEM131-PSMA6 TMEM131 chr2 98611938 - PSMA6 chr14 35777199 + Exonic hg19 Non-Cancer 271N 5 In-Frame Inter-chr q11.2 127005 ChimerSeq FusionScan GSE122401 TSPAN8-NDUFV2 TSPAN8 chr12 71551398 - NDUFV2 chr18 9117835 + Exonic hg19 Non-Cancer 271N 5 In-Frame Inter-chr q21.1 127006 ChimerSeq FusionScan GSE122401 UBQLN1-TLE1 UBQLN1 chr9 86322414 - TLE1 chr9 84235472 - Exonic hg19 Non-Cancer 271N 2 In-Frame Inter-chr q21.32 127007 ChimerSeq FusionScan GSE122401 USP48-HDLBP USP48 chr1 22109316 - HDLBP chr2 242207956 - Exonic hg19 Non-Cancer 271N 2 CDS-5'UTR Inter-chr p36.12 127008 ChimerSeq FusionScan GSE122401 UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer 271N 5 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 127009 ChimerSeq FusionScan GSE122401 AAAS-RPL8 AAAS chr12 53702508 - RPL8 chr8 146015855 - Exonic hg19 Non-Cancer 43N 2 In-Frame Inter-chr q13.13 127010 ChimerSeq FusionScan GSE122401 ABHD2-RAP1GAP2 ABHD2 chr15 89631794 + RAP1GAP2 chr17 2861052 + Exonic hg19 Non-Cancer 43N 2 5'UTR-CDS Inter-chr q26.1 127011 ChimerSeq FusionScan GSE122401 AGSK1-ZNF774 AGSK1 chr15 83145757 - ZNF774 chr15 90897873 + Exonic hg19 Non-Cancer 43N 3 3'UTR-5'UTR Inter-chr Transcription factor 127012 ChimerSeq FusionScan GSE122401 AP1M2-PASK AP1M2 chr19 10689567 - PASK chr2 242072445 - Exonic hg19 Non-Cancer 43N 2 Out-of-Frame Inter-chr p13.2 CAMK:CAMKL 127013 ChimerSeq FusionScan GSE122401 APOD-OPTN APOD chr3 195310748 - OPTN chr10 13174066 + Exonic hg19 Non-Cancer 43N 5 5'UTR-CDS Inter-chr q29 127014 ChimerSeq FusionScan GSE122401 ARFIP1-LRBA ARFIP1 chr4 153701378 + LRBA chr4 151604869 - Exonic hg19 Non-Cancer 43N 2 5'UTR-CDS Inter-chr q31.3 127015 ChimerSeq FusionScan GSE122401 ATXN1-ATRX ATXN1 chr6 16761528 - ATRX chrX 76778879 - Exonic hg19 Non-Cancer 43N 2 5'UTR-CDS Inter-chr p22.3 Oncogene 127016 ChimerSeq FusionScan GSE122401 BACE2-MX1 BACE2 chr21 42540502 + MX1 chr21 42830454 + Exonic hg19 Non-Cancer 43N 4 In-Frame Inter-chr q22.2 127017 ChimerSeq FusionScan GSE122401 BTBD10-KBTBD2 BTBD10 chr11 13484638 - KBTBD2 chr7 32919554 - Exonic hg19 Non-Cancer 43N 4 5'UTR-5'UTR Inter-chr p15.3 127018 ChimerSeq FusionScan GSE122401 BTN3A3-BTN3A1 BTN3A3 chr6 26450361 + BTN3A1 chr6 26412639 + Exonic hg19 Non-Cancer 43N 10 In-Frame Inter-chr p22.2 127019 ChimerSeq FusionScan GSE122401 C14orf80-PSME1 C14orf80 chr14 105960270 + PSME1 chr14 24606529 + Exonic hg19 Non-Cancer 43N 2 In-Frame Inter-chr q32.33 127020 ChimerSeq FusionScan GSE122401 CALM3-CALM1 CALM3 chr19 47112238 + CALM1 chr14 90871032 + Exonic hg19 Non-Cancer 43N 176 In-Frame Inter-chr q13.32 127021 ChimerSeq FusionScan GSE122401 CANX-IGJ CANX chr5 179134191 + IGJ chr4 71527932 - Exonic hg19 Non-Cancer 43N 2 In-Frame Inter-chr 127022 ChimerSeq FusionScan GSE122401 CCNT2-MYO1B CCNT2 chr2 135696632 + MYO1B chr2 192272840 + Exonic hg19 Non-Cancer 43N 7 Out-of-Frame Inter-chr q21.3 127023 ChimerSeq FusionScan GSE122401 CDC42BPB-ESRRA CDC42BPB chr14 103523335 - ESRRA chr11 64081422 + Exonic hg19 Non-Cancer 43N 2 In-Frame Inter-chr q32.32 Transcription factor 127024 ChimerSeq FusionScan GSE122401 CTSE-PGA3 CTSE chr1 206318467 + PGA3 chr11 60973981 + Exonic hg19 Non-Cancer 43N 273 In-Frame Inter-chr q32.1 127025 ChimerSeq FusionScan GSE122401 DDX60-COL3A1 DDX60 chr4 169205970 - COL3A1 chr2 189876353 + Exonic hg19 Non-Cancer 43N 16 Out-of-Frame Inter-chr q32.3 127026 ChimerSeq FusionScan GSE122401 DIP2C-DIP2A-IT1 DIP2C chr10 735433 - DIP2A-IT1 chr21 47882624 + Exonic hg19 Non-Cancer 43N 2 Out-of-Frame Inter-chr p15.3 127027 ChimerSeq FusionScan GSE122401 EPHB3-EPHB2 EPHB3 chr3 184289170 + EPHB2 chr1 23110884 + Exonic hg19 Non-Cancer 43N 29 In-Frame Inter-chr Tumor suppressor gene q27.1 Tumor suppressor gene 127028 ChimerSeq FusionScan GSE122401 FAM18B1-FAM18B2-CDRT4 FAM18B1 chr17 18707579 + FAM18B2-CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer 43N 2 CDS-3'UTR Inter-chr 127029 ChimerSeq FusionScan GSE122401 FCER1A-PGA5 FCER1A chr1 159276035 + PGA5 chr11 61017140 + Exonic hg19 Non-Cancer 43N 2 Out-of-Frame Inter-chr q23.2 127030 ChimerSeq FusionScan GSE122401 GKN1-GKN2 GKN1 chr2 69201821 + GKN2 chr2 69177887 - Exonic hg19 Non-Cancer 43N 3 In-Frame Inter-chr Tumor suppressor gene p13.3 Tumor suppressor gene 127031 ChimerSeq FusionScan GSE122401 GKN2-GKN1 GKN2 chr2 69177833 - GKN1 chr2 69206002 + Exonic hg19 Non-Cancer 43N 3 In-Frame Inter-chr Tumor suppressor gene p13.3 Tumor suppressor gene 127032 ChimerSeq FusionScan GSE122401 GKN2-GKN1 GKN2 chr2 69179981 - GKN1 chr2 69204626 + Exonic hg19 Non-Cancer 43N 101 In-Frame Inter-chr Tumor suppressor gene p13.3 Tumor suppressor gene 127033 ChimerSeq FusionScan GSE122401 HABP2-CELA3B HABP2 chr10 115345697 + CELA3B chr1 22313023 + Exonic hg19 Non-Cancer 43N 31 In-Frame Inter-chr q25.3 127034 ChimerSeq FusionScan GSE122401 HNRPDL-CA2 HNRPDL chr4 83347189 - CA2 chr8 86386552 + Exonic hg19 Non-Cancer 43N 3 3'UTR-CDS Inter-chr 127035 ChimerSeq FusionScan GSE122401 ING4-NCAPD2 ING4 chr12 6765892 - NCAPD2 chr12 6618882 + Exonic hg19 Non-Cancer 43N 2 In-Frame Inter-chr Oncogene Tumor suppressor gene p13.31 127036 ChimerSeq FusionScan GSE122401 ITPR1-ITPR2 ITPR1 chr3 4878619 + ITPR2 chr12 26492416 - Exonic hg19 Non-Cancer 43N 8 In-Frame Inter-chr p26.1 127037 ChimerSeq FusionScan GSE122401 ITPR3-HDLBP ITPR3 chr6 33659705 + HDLBP chr2 242194573 - Exonic hg19 Non-Cancer 43N 5 In-Frame Inter-chr p21.31 127038 ChimerSeq FusionScan GSE122401 KIDINS220-EPB41L5 KIDINS220 chr2 8910799 - EPB41L5 chr2 120885263 + Exonic hg19 Non-Cancer 43N 2 In-Frame Inter-chr p25.1 127039 ChimerSeq FusionScan GSE122401 LMAN2-CANX LMAN2 chr5 176778173 - CANX chr5 179132679 + Exonic hg19 Non-Cancer 43N 2 CDS-5'UTR Inter-chr q35.3 127040 ChimerSeq FusionScan GSE122401 MGRN1-GLYR1 MGRN1 chr16 4675049 + GLYR1 chr16 4882913 - Exonic hg19 Non-Cancer 43N 2 Out-of-Frame Inter-chr p13.3 Transcription factor 127041 ChimerSeq FusionScan GSE122401 NDUFA1-ILF3 NDUFA1 chrX 119005976 + ILF3 chr19 10792668 + Exonic hg19 Non-Cancer 43N 3 Out-of-Frame Inter-chr q24 127042 ChimerSeq FusionScan GSE122401 NECAP1-NECAP2 NECAP1 chr12 8242632 + NECAP2 chr1 16774364 + Exonic hg19 Non-Cancer 43N 63 In-Frame Inter-chr p13.31 127043 ChimerSeq FusionScan GSE122401 NLGN4Y-NLGN4X NLGN4Y chrY 16635452 + NLGN4X chrX 6069812 - Exonic hg19 Non-Cancer 43N 3 5'UTR-5'UTR Inter-chr q11.221 127044 ChimerSeq FusionScan GSE122401 PFDN1-CYSTM1 PFDN1 chr5 139661033 - CYSTM1 chr5 139622889 + Exonic hg19 Non-Cancer 43N 2 Out-of-Frame Inter-chr q31.3 127045 ChimerSeq FusionScan GSE122401 PGA3-CTSE PGA3 chr11 60971741 + CTSE chr1 206319100 + Exonic hg19 Non-Cancer 43N 73 In-Frame Inter-chr q12.2 127046 ChimerSeq FusionScan GSE122401 PGA4-CTSE PGA4 chr11 60990577 + CTSE chr1 206319100 + Exonic hg19 Non-Cancer 43N 162 In-Frame Inter-chr q12.2 127047 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41710027 - PGA3 chr11 60977313 + Exonic hg19 Non-Cancer 43N 2 In-Frame Inter-chr p21.1 127048 ChimerSeq FusionScan GSE122401 PLCG2-PDXDC1 PLCG2 chr16 81922878 + PDXDC1 chr16 15091609 + Exonic hg19 Non-Cancer 43N 2 In-Frame Inter-chr q23.3 127049 ChimerSeq FusionScan GSE122401 PNRC1-PM20D2 PNRC1 chr6 89791153 + PM20D2 chr6 89858983 + Exonic hg19 Non-Cancer 43N 3 In-Frame Inter-chr q15 127050 ChimerSeq FusionScan GSE122401 PSAP-RPS24 PSAP chr10 73610938 - RPS24 chr10 79795109 + Exonic hg19 Non-Cancer 43N 2 Out-of-Frame Inter-chr q22.1 127051 ChimerSeq FusionScan GSE122401 RARG-C11orf9 RARG chr12 53624952 - C11orf9 chr11 61533096 + Exonic hg19 Non-Cancer 43N 2 5'UTR-CDS Inter-chr Transcription factor q13.13 127052 ChimerSeq FusionScan GSE122401 RCC1-C4orf34 RCC1 chr1 28834672 + C4orf34 chr4 39606800 - Exonic hg19 Non-Cancer 43N 2 5'UTR-5'UTR Inter-chr p35.3 127053 ChimerSeq FusionScan GSE122401 RPL4-GCA RPL4 chr15 66795395 - GCA chr2 163213267 + Exonic hg19 Non-Cancer 43N 40 In-Frame Inter-chr q22.31 127054 ChimerSeq FusionScan GSE122401 S1PR2-MFSD10 S1PR2 chr19 10341879 - MFSD10 chr4 2935671 - Exonic hg19 Non-Cancer 43N 2 5'UTR-5'UTR Inter-chr p13.2 127055 ChimerSeq FusionScan GSE122401 SMEK1-IFNGR2 SMEK1 chr14 91947919 - IFNGR2 chr21 34804483 + Exonic hg19 Non-Cancer 43N 6 In-Frame Inter-chr 127056 ChimerSeq FusionScan GSE122401 SPRED2-B3GNT2 SPRED2 chr2 65659095 - B3GNT2 chr2 62449346 + Exonic hg19 Non-Cancer 43N 2 CDS-5'UTR Inter-chr p14 127057 ChimerSeq FusionScan GSE122401 THRAP3-MRPS15 THRAP3 chr1 36690106 + MRPS15 chr1 36923582 - Exonic hg19 Non-Cancer 43N 2 5'UTR-CDS Inter-chr p34.3 127058 ChimerSeq FusionScan GSE122401 TLN2-TPM1 TLN2 chr15 62967520 + TPM1 chr15 63349183 + Exonic hg19 Non-Cancer 43N 4 In-Frame Inter-chr q22.2 127059 ChimerSeq FusionScan GSE122401 TMED5-CSDE1 TMED5 chr1 93645610 - CSDE1 chr1 115282511 - Exonic hg19 Non-Cancer 43N 2 In-Frame Inter-chr p22.1 127060 ChimerSeq FusionScan GSE122401 TMEM123-YAP1 TMEM123 chr11 102323254 - YAP1 chr11 102033186 + Exonic hg19 Non-Cancer 43N 2 Out-of-Frame Inter-chr q22.2 Tumor suppressor gene 127061 ChimerSeq FusionScan GSE122401 TMEM171-BTF3 TMEM171 chr5 72419840 + BTF3 chr5 72801016 + Exonic hg19 Non-Cancer 43N 5 In-Frame Inter-chr q13.2 127062 ChimerSeq FusionScan GSE122401 TNFAIP1-KCTD13 TNFAIP1 chr17 26669468 + KCTD13 chr16 29918429 - Exonic hg19 Non-Cancer 43N 56 In-Frame Inter-chr q11.2 127063 ChimerSeq FusionScan GSE122401 UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer 43N 6 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 127064 ChimerSeq FusionScan GSE122401 VKORC1-CD99 VKORC1 chr16 31105877 - CD99 chrY 2606240 + Exonic hg19 Non-Cancer 43N 11 Out-of-Frame Inter-chr p11.2 127065 ChimerSeq FusionScan GSE122401 WRB-SH3BGR WRB chr21 40763762 + SH3BGR chr21 40834300 + Exonic hg19 Non-Cancer 43N 2 In-Frame Inter-chr q22.2 127066 ChimerSeq FusionScan GSE122401 ZNF280C-ZNF280D ZNF280C chrX 129394392 - ZNF280D chr15 56996465 - Exonic hg19 Non-Cancer 43N 9 In-Frame Inter-chr Transcription factor q26.1 Transcription factor 127067 ChimerSeq FusionScan GSE122401 ZNF280D-CYSTM1 ZNF280D chr15 57025655 - CYSTM1 chr5 139574030 + Exonic hg19 Non-Cancer 43N 3 5'UTR-5'UTR Inter-chr Transcription factor q21.3 127068 ChimerSeq FusionScan GSE122401 ZNF493-OGT ZNF493 chr19 21580069 + OGT chrX 70767756 + Exonic hg19 Non-Cancer 43N 2 In-Frame Inter-chr Transcription factor p12 127069 ChimerSeq FusionScan GSE122401 ABCC3-LRRC59 ABCC3 chr17 48712342 + LRRC59 chr17 48465493 - Exonic hg19 Non-Cancer 5263N 3 In-Frame Inter-chr q21.33 127070 ChimerSeq FusionScan GSE122401 ABR-SAYSD1 ABR chr17 953289 - SAYSD1 chr6 39073552 - Exonic hg19 Non-Cancer 5263N 3 In-Frame Inter-chr p13.3 127071 ChimerSeq FusionScan GSE122401 ANKRD28-GPR155 ANKRD28 chr3 15900883 - GPR155 chr2 175335283 - Exonic hg19 Non-Cancer 5263N 2 Out-of-Frame Inter-chr p25.1 127072 ChimerSeq FusionScan GSE122401 C17orf76-AS1-MARVELD2 C17orf76-AS1 chr17 16342728 + MARVELD2 chr5 68720427 + Exonic hg19 Non-Cancer 5263N 2 Out-of-Frame Inter-chr Tumor suppressor gene 127073 ChimerSeq FusionScan GSE122401 C20orf72-RNPC3 C20orf72 chr20 17951013 + RNPC3 chr1 104097655 + Exonic hg19 Non-Cancer 5263N 2 CDS-3'UTR Inter-chr 127074 ChimerSeq FusionScan GSE122401 C9orf3-FAM120A C9orf3 chr9 97767898 + FAM120A chr9 96259752 + Exonic hg19 Non-Cancer 5263N 2 In-Frame Inter-chr q22.32 127075 ChimerSeq FusionScan GSE122401 CREG1-DCAF6 CREG1 chr1 167517238 - DCAF6 chr1 167971719 + Exonic hg19 Non-Cancer 5263N 3 In-Frame Inter-chr q24.2 127076 ChimerSeq FusionScan GSE122401 FAM73A-MYCBP2 FAM73A chr1 78332076 + MYCBP2 chr13 77641999 - Exonic hg19 Non-Cancer 5263N 2 In-Frame Inter-chr 127077 ChimerSeq FusionScan GSE122401 HNRNPU-SMYD3 HNRNPU chr1 245018274 - SMYD3 chr1 245927451 - Exonic hg19 Non-Cancer 5263N 11 Out-of-Frame Inter-chr q44 Transcription factor 127078 ChimerSeq FusionScan GSE122401 LMTK2-SRPK2 LMTK2 chr7 97800986 + SRPK2 chr7 104844232 - Exonic hg19 Non-Cancer 5263N 2 In-Frame Inter-chr q21.3 CMGC:SRPK 127079 ChimerSeq FusionScan GSE122401 LTBP3-LTBP1 LTBP3 chr11 65307956 - LTBP1 chr2 33518226 + Exonic hg19 Non-Cancer 5263N 13 In-Frame Inter-chr q13.1 127080 ChimerSeq FusionScan GSE122401 LUC7L-TPM4 LUC7L chr16 279277 - TPM4 chr19 16192722 + Exonic hg19 Non-Cancer 5263N 7 Out-of-Frame Inter-chr p13.3 127081 ChimerSeq FusionScan GSE122401 MAPK10-MAPK8 MAPK10 chr4 87022204 - MAPK8 chr10 49632556 + Exonic hg19 Non-Cancer 5263N 19 In-Frame Inter-chr Tumor suppressor gene q21.3 Oncogene 127082 ChimerSeq FusionScan GSE122401 MBTPS2-DMD MBTPS2 chrX 21896810 + DMD chrX 32328393 - Exonic hg19 Non-Cancer 5263N 2 Out-of-Frame Inter-chr p22.12 Tumor suppressor gene 127083 ChimerSeq FusionScan GSE122401 NBPF3-NBPF15 NBPF3 chr1 21766841 + NBPF15 chr1 148560846 + Exonic hg19 Non-Cancer 5263N 9 5'UTR-5'UTR Inter-chr p36.12 127084 ChimerSeq FusionScan GSE122401 NDUFV2-MYL12A NDUFV2 chr18 9102795 + MYL12A chr18 3253230 + Exonic hg19 Non-Cancer 5263N 2 CDS-5'UTR Inter-chr p11.22 127085 ChimerSeq FusionScan GSE122401 PGA3-CTSE PGA3 chr11 60971741 + CTSE chr1 206319100 + Exonic hg19 Non-Cancer 5263N 23 In-Frame Inter-chr q12.2 127086 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60974099 + PGC chr6 41711127 - Exonic hg19 Non-Cancer 5263N 68 In-Frame Inter-chr q12.2 127087 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60975962 + PGC chr6 41708348 - Exonic hg19 Non-Cancer 5263N 243 In-Frame Inter-chr q12.2 127088 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41710027 - PGA3 chr11 60977313 + Exonic hg19 Non-Cancer 5263N 18 In-Frame Inter-chr p21.1 127089 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41712395 - PGA3 chr11 60973981 + Exonic hg19 Non-Cancer 5263N 15 In-Frame Inter-chr p21.1 127090 ChimerSeq FusionScan GSE122401 PRKACB-EIF3E PRKACB chr1 84610231 + EIF3E chr8 109241424 - Exonic hg19 Non-Cancer 5263N 2 Out-of-Frame Inter-chr p31.1 127091 ChimerSeq FusionScan GSE122401 RNF216-RBAK-LOC389458 RNF216 chr7 5769062 - RBAK-LOC389458 chr7 5087663 + Exonic hg19 Non-Cancer 5263N 2 CDS-5'UTR Inter-chr p22.1 Transcription factor 127092 ChimerSeq FusionScan GSE122401 SAR1A-TAMM41 SAR1A chr10 71913593 - TAMM41 chr3 11832055 - Exonic hg19 Non-Cancer 5263N 2 Out-of-Frame Inter-chr q22.1 127093 ChimerSeq FusionScan GSE122401 SEC61A1-ATP4B SEC61A1 chr3 127786902 + ATP4B chr13 114304822 - Exonic hg19 Non-Cancer 5263N 7 Out-of-Frame Inter-chr q21.3 127094 ChimerSeq FusionScan GSE122401 SMAD2-TRAPPC8 SMAD2 chr18 45422891 - TRAPPC8 chr18 29497630 - Exonic hg19 Non-Cancer 5263N 5 Out-of-Frame Inter-chr Oncogene Tumor suppressor gene q21.1 127095 ChimerSeq FusionScan GSE122401 TFCP2L1-MOB1A TFCP2L1 chr2 122038695 - MOB1A chr2 74399879 - Exonic hg19 Non-Cancer 5263N 2 Out-of-Frame Inter-chr Transcription factor q14.2 Tumor suppressor gene 127096 ChimerSeq FusionScan GSE122401 TNIP1-ZWILCH TNIP1 chr5 150411847 - ZWILCH chr15 66820194 + Exonic hg19 Non-Cancer 5263N 2 In-Frame Inter-chr q33.1 127097 ChimerSeq FusionScan GSE122401 UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer 5263N 15 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 127098 ChimerSeq FusionScan GSE122401 ARNT-PRPF3 ARNT chr1 150830824 - PRPF3 chr1 150321632 + Exonic hg19 Non-Cancer 5357N 2 Out-of-Frame Inter-chr Oncogene Transcription factor q21.3 127099 ChimerSeq FusionScan GSE122401 ATF1-B2M ATF1 chr12 51158090 + B2M chr15 45007620 + Exonic hg19 Non-Cancer 5357N 3 5'UTR-CDS Inter-chr Oncogene Transcription factor q13.12 Oncogene 127100 ChimerSeq FusionScan GSE122401 BRI3BP-UBC BRI3BP chr12 125478549 + UBC chr12 125398320 - Exonic hg19 Non-Cancer 5357N 2 CDS-5'UTR Inter-chr q24.31 127101 ChimerSeq FusionScan GSE122401 CTSE-PGA3 CTSE chr1 206318467 + PGA3 chr11 60973981 + Exonic hg19 Non-Cancer 5357N 105 In-Frame Inter-chr q32.1 127102 ChimerSeq FusionScan GSE122401 CYP51A1-KRIT1 CYP51A1 chr7 91755566 - KRIT1 chr7 91864960 - Exonic hg19 Non-Cancer 5357N 3 In-Frame Inter-chr q21.2 Tumor suppressor gene 127103 ChimerSeq FusionScan GSE122401 DBNL-CTTN DBNL chr7 44099752 + CTTN chr11 70281131 + Exonic hg19 Non-Cancer 5357N 37 In-Frame Inter-chr p13 127104 ChimerSeq FusionScan GSE122401 DVL1-DVL3 DVL1 chr1 1275417 - DVL3 chr3 183884393 + Exonic hg19 Non-Cancer 5357N 5 Out-of-Frame Inter-chr p36.33 127105 ChimerSeq FusionScan GSE122401 FARP1-STK24 FARP1 chr13 98795746 + STK24 chr13 99171727 - Exonic hg19 Non-Cancer 5357N 2 5'UTR-CDS Inter-chr q32.2 127106 ChimerSeq FusionScan GSE122401 GALE-SKI GALE chr1 24124606 - SKI chr1 2237458 + Exonic hg19 Non-Cancer 5357N 3 In-Frame Inter-chr p36.11 Transcription factor 127107 ChimerSeq FusionScan GSE122401 LGALS9B-LGALS9 LGALS9B chr17 20363664 - LGALS9 chr17 25967597 + Exonic hg19 Non-Cancer 5357N 52 In-Frame Inter-chr p11.2 127108 ChimerSeq FusionScan GSE122401 LIPF-VEGFA LIPF chr10 90436037 + VEGFA chr6 43737945 + Exonic hg19 Non-Cancer 5357N 2 CDS-5'UTR Inter-chr q23.31 Tumor suppressor gene 127109 ChimerSeq FusionScan GSE122401 LRP5-LRP1 LRP5 chr11 68115711 + LRP1 chr12 57592247 + Exonic hg19 Non-Cancer 5357N 13 In-Frame Inter-chr q13.2 127110 ChimerSeq FusionScan GSE122401 LRRC42-NRD1 LRRC42 chr1 54412222 + NRD1 chr1 52306186 - Exonic hg19 Non-Cancer 5357N 2 5'UTR-5'UTR Inter-chr p32.3 127111 ChimerSeq FusionScan GSE122401 MTMR12-GEMIN4 MTMR12 chr5 32312863 - GEMIN4 chr17 651272 - Exonic hg19 Non-Cancer 5357N 2 Out-of-Frame Inter-chr p13.3 127112 ChimerSeq FusionScan GSE122401 PGA3-CTSE PGA3 chr11 60971741 + CTSE chr1 206319100 + Exonic hg19 Non-Cancer 5357N 42 In-Frame Inter-chr q12.2 127113 ChimerSeq FusionScan GSE122401 PGA3-EEF1D PGA3 chr11 60975962 + EEF1D chr8 144669022 - Exonic hg19 Non-Cancer 5357N 3 In-Frame Inter-chr q12.2 127114 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60971741 + PGC chr6 41712252 - Exonic hg19 Non-Cancer 5357N 18 In-Frame Inter-chr q12.2 127115 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60974099 + PGC chr6 41711127 - Exonic hg19 Non-Cancer 5357N 142 In-Frame Inter-chr q12.2 127116 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60975962 + PGC chr6 41708348 - Exonic hg19 Non-Cancer 5357N 301 In-Frame Inter-chr q12.2 127117 ChimerSeq FusionScan GSE122401 PGA4-CAPN2 PGA4 chr11 60990577 + CAPN2 chr1 223946971 + Exonic hg19 Non-Cancer 5357N 3 In-Frame Inter-chr q12.2 127118 ChimerSeq FusionScan GSE122401 PGA4-CTSE PGA4 chr11 60990577 + CTSE chr1 206319100 + Exonic hg19 Non-Cancer 5357N 34 In-Frame Inter-chr q12.2 127119 ChimerSeq FusionScan GSE122401 PGA4-PGC PGA4 chr11 60990577 + PGC chr6 41712252 - Exonic hg19 Non-Cancer 5357N 17 In-Frame Inter-chr q12.2 127120 ChimerSeq FusionScan GSE122401 PGA4-PGC PGA4 chr11 60994791 + PGC chr6 41708348 - Exonic hg19 Non-Cancer 5357N 320 In-Frame Inter-chr q12.2 127121 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41710027 - PGA3 chr11 60977313 + Exonic hg19 Non-Cancer 5357N 35 In-Frame Inter-chr p21.1 127122 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41710027 - PGA3 chr11 60980024 + Exonic hg19 Non-Cancer 5357N 2 Out-of-Frame Inter-chr p21.1 127123 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41712134 - PGA3 chr11 60970983 + Exonic hg19 Non-Cancer 5357N 4 CDS-5'UTR Inter-chr p21.1 127124 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41712134 - PGA3 chr11 60974968 + Exonic hg19 Non-Cancer 5357N 129 In-Frame Inter-chr p21.1 127125 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41712395 - PGA3 chr11 60973981 + Exonic hg19 Non-Cancer 5357N 21 In-Frame Inter-chr p21.1 127126 ChimerSeq FusionScan GSE122401 PGC-PGA4 PGC chr6 41712134 - PGA4 chr11 60993797 + Exonic hg19 Non-Cancer 5357N 105 In-Frame Inter-chr p21.1 127127 ChimerSeq FusionScan GSE122401 PPP2R2D-PPP2R2C PPP2R2D chr10 133761295 + PPP2R2C chr4 6325320 - Exonic hg19 Non-Cancer 5357N 13 Out-of-Frame Inter-chr q26.3 Tumor suppressor gene 127128 ChimerSeq FusionScan GSE122401 PPP4R2-MSL2 PPP4R2 chr3 73047309 + MSL2 chr3 135871580 - Exonic hg19 Non-Cancer 5357N 2 Out-of-Frame Inter-chr p13 127129 ChimerSeq FusionScan GSE122401 PSCA-SMAD9 PSCA chr8 143761981 + SMAD9 chr13 37454012 - Exonic hg19 Non-Cancer 5357N 7 CDS-5'UTR Inter-chr q24.3 Transcription factor 127130 ChimerSeq FusionScan GSE122401 SAMD13-DNASE2B SAMD13 chr1 84791431 + DNASE2B chr1 84874119 + Exonic hg19 Non-Cancer 5357N 2 In-Frame Inter-chr p31.1 127131 ChimerSeq FusionScan GSE122401 SERPINB1-PGA3 SERPINB1 chr6 2836089 - PGA3 chr11 60970983 + Exonic hg19 Non-Cancer 5357N 3 CDS-5'UTR Inter-chr p25.2 127132 ChimerSeq FusionScan GSE122401 SGPP2-SPATS2L SGPP2 chr2 223289540 + SPATS2L chr2 201277033 + Exonic hg19 Non-Cancer 5357N 2 In-Frame Inter-chr q36.1 127133 ChimerSeq FusionScan GSE122401 UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer 5357N 10 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 127134 ChimerSeq FusionScan GSE122401 VSIG1-SYTL2 VSIG1 chrX 107288409 + SYTL2 chr11 85425550 - Exonic hg19 Non-Cancer 5357N 2 In-Frame Inter-chr q22.3 127135 ChimerSeq FusionScan GSE122401 YWHAH-NAB1 YWHAH chr22 32340806 + NAB1 chr2 191520702 + Exonic hg19 Non-Cancer 5357N 2 CDS-5'UTR Inter-chr q12.3 127136 ChimerSeq FusionScan GSE122401 AP2B1-CCT6B AP2B1 chr17 33968994 + CCT6B chr17 33281618 - Exonic hg19 Non-Cancer 5373N 6 In-Frame Inter-chr q12 127137 ChimerSeq FusionScan GSE122401 ARHGAP26-CTNND1 ARHGAP26 chr5 142311690 + CTNND1 chr11 57578870 + Exonic hg19 Non-Cancer 5373N 14 In-Frame Inter-chr q31.3 Tumor suppressor gene 127138 ChimerSeq FusionScan GSE122401 ATP2B3-ATP2B4 ATP2B3 chrX 152830561 + ATP2B4 chr1 203708673 + Exonic hg19 Non-Cancer 5373N 24 In-Frame Inter-chr q28 127139 ChimerSeq FusionScan GSE122401 BTN3A3-BTN3A1 BTN3A3 chr6 26450361 + BTN3A1 chr6 26412639 + Exonic hg19 Non-Cancer 5373N 6 In-Frame Inter-chr p22.2 127140 ChimerSeq FusionScan GSE122401 CNOT6-CLTC CNOT6 chr5 179991743 + CLTC chr17 57746137 + Exonic hg19 Non-Cancer 5373N 2 In-Frame Inter-chr q35.3 127141 ChimerSeq FusionScan GSE122401 CTNND1-ARHGAP26 CTNND1 chr11 57577695 + ARHGAP26 chr5 142393644 + Exonic hg19 Non-Cancer 5373N 14 In-Frame Inter-chr Tumor suppressor gene q12.1 127142 ChimerSeq FusionScan GSE122401 GTPBP4-EIF4G2 GTPBP4 chr10 1043248 + EIF4G2 chr11 10828432 - Exonic hg19 Non-Cancer 5373N 2 Out-of-Frame Inter-chr Tumor suppressor gene p15.3 127143 ChimerSeq FusionScan GSE122401 HTT-GRK4 HTT chr4 3142383 + GRK4 chr4 2986239 + Exonic hg19 Non-Cancer 5373N 2 Out-of-Frame Inter-chr p16.3 127144 ChimerSeq FusionScan GSE122401 LDHAL6A-LDHB LDHAL6A chr11 18497186 + LDHB chr12 21791404 - Exonic hg19 Non-Cancer 5373N 27 In-Frame Inter-chr p15.1 127145 ChimerSeq FusionScan GSE122401 LRP5-LRP1 LRP5 chr11 68115711 + LRP1 chr12 57592247 + Exonic hg19 Non-Cancer 5373N 18 In-Frame Inter-chr q13.2 127146 ChimerSeq FusionScan GSE122401 LTBP3-LTBP1 LTBP3 chr11 65307956 - LTBP1 chr2 33518226 + Exonic hg19 Non-Cancer 5373N 16 In-Frame Inter-chr q13.1 127147 ChimerSeq FusionScan GSE122401 MGC2752-IL9R MGC2752 chr19 59086955 + IL9R chrY 59337948 + Exonic hg19 Non-Cancer 5373N 2 5'UTR-5'UTR Inter-chr 127148 ChimerSeq FusionScan GSE122401 NLK-SLC39A11 NLK chr17 26449758 + SLC39A11 chr17 70944014 - Exonic hg19 Non-Cancer 5373N 4 In-Frame Inter-chr CMGC:MAPK q11.2 127149 ChimerSeq FusionScan GSE122401 PHC3-PLD1 PHC3 chr3 169889160 - PLD1 chr3 171443866 - Exonic hg19 Non-Cancer 5373N 3 In-Frame Inter-chr Tumor suppressor gene q26.2 Tumor suppressor gene 127150 ChimerSeq FusionScan GSE122401 RBBP4-RBBP7 RBBP4 chr1 33134733 + RBBP7 chrX 16870998 - Exonic hg19 Non-Cancer 5373N 38 In-Frame Inter-chr p35.1 Tumor suppressor gene 127151 ChimerSeq FusionScan GSE122401 SLC7A5-SMG1 SLC7A5 chr16 87902490 - SMG1 chr16 18900907 - Exonic hg19 Non-Cancer 5373N 3 Out-of-Frame Inter-chr q24.2 Atypical:PIKK 127152 ChimerSeq FusionScan GSE122401 SLC7A5-SMG1 SLC7A5 chr16 87902490 - SMG1 chr16 18908278 - Exonic hg19 Non-Cancer 5373N 4 Out-of-Frame Inter-chr q24.2 Atypical:PIKK 127153 ChimerSeq FusionScan GSE122401 SMA4-C1QTNF3-AMACR SMA4 chr5 69492704 - C1QTNF3-AMACR chr5 34035863 - Exonic hg19 Non-Cancer 5373N 2 3'UTR-CDS Inter-chr 127154 ChimerSeq FusionScan GSE122401 SMARCA4-SMARCA2 SMARCA4 chr19 11141569 + SMARCA2 chr9 2115821 + Exonic hg19 Non-Cancer 5373N 37 In-Frame Inter-chr Oncogene Tumor suppressor gene p13.2 Tumor suppressor gene 127155 ChimerSeq FusionScan GSE122401 USP48-YWHAE USP48 chr1 22109316 - YWHAE chr17 1248793 - Exonic hg19 Non-Cancer 5373N 5 Out-of-Frame Inter-chr p36.12 127156 ChimerSeq FusionScan GSE122401 ATP1A1-ATP1A3 ATP1A1 chr1 116939356 + ATP1A3 chr19 42480718 - Exonic hg19 Non-Cancer 5381N 129 In-Frame Inter-chr p13.1 127157 ChimerSeq FusionScan GSE122401 DDX58-KDM4C DDX58 chr9 32491298 - KDM4C chr9 7011697 + Exonic hg19 Non-Cancer 5381N 2 In-Frame Inter-chr Tumor suppressor gene p21.1 127158 ChimerSeq FusionScan GSE122401 EPS15L1-EPN1 EPS15L1 chr19 16582723 - EPN1 chr19 56196761 + Exonic hg19 Non-Cancer 5381N 2 In-Frame Inter-chr p13.11 127159 ChimerSeq FusionScan GSE122401 LAMC2-RCC1 LAMC2 chr1 183209526 + RCC1 chr1 28834639 + Exonic hg19 Non-Cancer 5381N 3 CDS-5'UTR Inter-chr q25.3 127160 ChimerSeq FusionScan GSE122401 MARCH9-MARCH4 2019_ 3_ 9_ chr12 58150867 + 2019_ 3_ 4_ chr2 217142587 - Exonic hg19 Non-Cancer 5381N 8 In-Frame Inter-chr q14.1 127161 ChimerSeq FusionScan GSE122401 MYO1E-AP4E1 MYO1E chr15 59445788 - AP4E1 chr15 51293222 + Exonic hg19 Non-Cancer 5381N 2 In-Frame Inter-chr q22.2 127162 ChimerSeq FusionScan GSE122401 NACC1-NACC2 NACC1 chr19 13248190 + NACC2 chr9 138905142 - Exonic hg19 Non-Cancer 5381N 35 In-Frame Inter-chr p13.13 Transcription factor 127163 ChimerSeq FusionScan GSE122401 PGA3-CTSE PGA3 chr11 60971741 + CTSE chr1 206319100 + Exonic hg19 Non-Cancer 5381N 31 In-Frame Inter-chr q12.2 127164 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60971741 + PGC chr6 41712252 - Exonic hg19 Non-Cancer 5381N 15 In-Frame Inter-chr q12.2 127165 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60974099 + PGC chr6 41711127 - Exonic hg19 Non-Cancer 5381N 83 In-Frame Inter-chr q12.2 127166 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60975962 + PGC chr6 41708348 - Exonic hg19 Non-Cancer 5381N 332 In-Frame Inter-chr q12.2 127167 ChimerSeq FusionScan GSE122401 PGA3-RPS15A PGA3 chr11 60975962 + RPS15A chr16 18800440 - Exonic hg19 Non-Cancer 5381N 2 CDS-5'UTR Inter-chr q12.2 127168 ChimerSeq FusionScan GSE122401 PGA4-CTSE PGA4 chr11 60990577 + CTSE chr1 206319100 + Exonic hg19 Non-Cancer 5381N 41 In-Frame Inter-chr q12.2 127169 ChimerSeq FusionScan GSE122401 PGA4-PGC PGA4 chr11 60990577 + PGC chr6 41712252 - Exonic hg19 Non-Cancer 5381N 16 In-Frame Inter-chr q12.2 127170 ChimerSeq FusionScan GSE122401 PGC-EXOC3L4 PGC chr6 41712134 - EXOC3L4 chr14 103570277 + Exonic hg19 Non-Cancer 5381N 5 Out-of-Frame Inter-chr p21.1 127171 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41712134 - PGA3 chr11 60974968 + Exonic hg19 Non-Cancer 5381N 117 In-Frame Inter-chr p21.1 127172 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41712395 - PGA3 chr11 60973981 + Exonic hg19 Non-Cancer 5381N 14 In-Frame Inter-chr p21.1 127173 ChimerSeq FusionScan GSE122401 RAC1-WDR70 RAC1 chr7 6431672 + WDR70 chr5 37443340 + Exonic hg19 Non-Cancer 5381N 2 In-Frame Inter-chr Oncogene p22.1 127174 ChimerSeq FusionScan GSE122401 RCC1-RPL37A RCC1 chr1 28834672 + RPL37A chr2 217363992 + Exonic hg19 Non-Cancer 5381N 5 5'UTR-CDS Inter-chr p35.3 127175 ChimerSeq FusionScan GSE122401 SEL1L3-FIP1L1 SEL1L3 chr4 25803904 - FIP1L1 chr4 54265896 + Exonic hg19 Non-Cancer 5381N 6 In-Frame Inter-chr p15.2 127176 ChimerSeq FusionScan GSE122401 SLC39A14-PGA3 SLC39A14 chr8 22273470 + PGA3 chr11 60975762 + Exonic hg19 Non-Cancer 5381N 4 In-Frame Inter-chr p21.3 127177 ChimerSeq FusionScan GSE122401 STRADB-RGNEF STRADB chr2 202343324 + RGNEF chr5 73160641 + Exonic hg19 Non-Cancer 5381N 2 Out-of-Frame Inter-chr q33.1 127178 ChimerSeq FusionScan GSE122401 ZNF57-FAM156A ZNF57 chr19 2901046 + FAM156A chrX 52985544 - Exonic hg19 Non-Cancer 5381N 2 CDS-5'UTR Inter-chr Transcription factor p13.3 127179 ChimerSeq FusionScan GSE122401 BTN3A3-BTN3A2 BTN3A3 chr6 26450361 + BTN3A2 chr6 26376024 + Exonic hg19 Non-Cancer 5759N 8 CDS-3'UTR Inter-chr p22.2 127180 ChimerSeq FusionScan GSE122401 C17orf62-C14orf159 C17orf62 chr17 80408575 - C14orf159 chr14 91691027 + Exonic hg19 Non-Cancer 5759N 2 5'UTR-CDS Inter-chr q25.3 127181 ChimerSeq FusionScan GSE122401 CELF1-TTC1 CELF1 chr11 47505940 - TTC1 chr5 159437506 + Exonic hg19 Non-Cancer 5759N 7 CDS-5'UTR Inter-chr p11.2 127182 ChimerSeq FusionScan GSE122401 CTSE-PGC CTSE chr1 206318467 + PGC chr6 41712252 - Exonic hg19 Non-Cancer 5759N 21 In-Frame Inter-chr q32.1 127183 ChimerSeq FusionScan GSE122401 GKN1-GKN2 GKN1 chr2 69201821 + GKN2 chr2 69177887 - Exonic hg19 Non-Cancer 5759N 24 In-Frame Inter-chr Tumor suppressor gene p13.3 Tumor suppressor gene 127184 ChimerSeq FusionScan GSE122401 IER3IP1-ATP5A1 IER3IP1 chr18 44702557 - ATP5A1 chr18 43671817 - Exonic hg19 Non-Cancer 5759N 3 In-Frame Inter-chr q21.1 127185 ChimerSeq FusionScan GSE122401 LLGL2-C17orf28 LLGL2 chr17 73560588 + C17orf28 chr17 72952051 - Exonic hg19 Non-Cancer 5759N 4 In-Frame Inter-chr q25.1 127186 ChimerSeq FusionScan GSE122401 LRP5-LRP1 LRP5 chr11 68115711 + LRP1 chr12 57592247 + Exonic hg19 Non-Cancer 5759N 11 In-Frame Inter-chr q13.2 127187 ChimerSeq FusionScan GSE122401 MGAT4A-MGAT4B MGAT4A chr2 99261890 - MGAT4B chr5 179226636 - Exonic hg19 Non-Cancer 5759N 62 In-Frame Inter-chr q11.2 127188 ChimerSeq FusionScan GSE122401 MGC2752-IL9R MGC2752 chr19 59086955 + IL9R chrY 59337948 + Exonic hg19 Non-Cancer 5759N 2 5'UTR-5'UTR Inter-chr 127189 ChimerSeq FusionScan GSE122401 PGA3-ACTB PGA3 chr11 60977430 + ACTB chr7 5569294 - Exonic hg19 Non-Cancer 5759N 4 CDS-3'UTR Inter-chr q12.2 127190 ChimerSeq FusionScan GSE122401 PGA3-CTSE PGA3 chr11 60971741 + CTSE chr1 206319100 + Exonic hg19 Non-Cancer 5759N 35 In-Frame Inter-chr q12.2 127191 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60971741 + PGC chr6 41712252 - Exonic hg19 Non-Cancer 5759N 13 In-Frame Inter-chr q12.2 127192 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60974099 + PGC chr6 41711127 - Exonic hg19 Non-Cancer 5759N 78 In-Frame Inter-chr q12.2 127193 ChimerSeq FusionScan GSE122401 PGA3-PGC PGA3 chr11 60975962 + PGC chr6 41708348 - Exonic hg19 Non-Cancer 5759N 303 In-Frame Inter-chr q12.2 127194 ChimerSeq FusionScan GSE122401 PGA4-PGC PGA4 chr11 60990577 + PGC chr6 41712252 - Exonic hg19 Non-Cancer 5759N 20 In-Frame Inter-chr q12.2 127195 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41710027 - PGA3 chr11 60977313 + Exonic hg19 Non-Cancer 5759N 16 In-Frame Inter-chr p21.1 127196 ChimerSeq FusionScan GSE122401 PGC-PGA3 PGC chr6 41712134 - PGA3 chr11 60974968 + Exonic hg19 Non-Cancer 5759N 97 In-Frame Inter-chr p21.1 127197 ChimerSeq FusionScan GSE122401 RNF216-RBAK-LOC389458 RNF216 chr7 5800633 - RBAK-LOC389458 chr7 5087663 + Exonic hg19 Non-Cancer 5759N 3 CDS-5'UTR Inter-chr p22.1 Transcription factor 127198 ChimerSeq FusionScan GSE122401 SLC25A4-SLC25A6 SLC25A4 chr4 186064637 + SLC25A6 chrX 1508620 - Exonic hg19 Non-Cancer 5759N 185 In-Frame Inter-chr q35.1 127199 ChimerSeq FusionScan GSE122401 SLC38A10-PGA3 SLC38A10 chr17 79225994 - PGA3 chr11 60974968 + Exonic hg19 Non-Cancer 5759N 2 In-Frame Inter-chr q25.3 127200 ChimerSeq FusionScan GSE122401 UBA1-UBA7 UBA1 chrX 47071911 + UBA7 chr3 49845545 - Exonic hg19 Non-Cancer 5759N 45 In-Frame Inter-chr p11.3 127201 ChimerSeq FusionScan GSE122401 A2LD1-PCCA A2LD1 chr13 101236078 - PCCA chr13 100807232 + Exonic hg19 Non-Cancer 61N 2 5'UTR-CDS Inter-chr 127202 ChimerSeq FusionScan GSE122401 ABCC3-SLC44A4 ABCC3 chr17 48741472 + SLC44A4 chr6 31837414 - Exonic hg19 Non-Cancer 61N 2 CDS-5'UTR Inter-chr q21.33 127203 ChimerSeq FusionScan GSE122401 ACTA2-ACTA1 ACTA2 chr10 90701541 - ACTA1 chr1 229568178 - Exonic hg19 Non-Cancer 61N 139 CDS-5'UTR Inter-chr q23.31 127204 ChimerSeq FusionScan GSE122401 AP2A1-NDUFA11 AP2A1 chr19 50270457 + NDUFA11 chr19 5897008 - Exonic hg19 Non-Cancer 61N 2 In-Frame Inter-chr q13.33 127205 ChimerSeq FusionScan GSE122401 AP3B1-MRPS36 AP3B1 chr5 77385216 - MRPS36 chr5 68522164 + Exonic hg19 Non-Cancer 61N 2 In-Frame Inter-chr q14.1 127206 ChimerSeq FusionScan GSE122401 ARRDC3-CNTF ARRDC3 chr5 90678629 - CNTF chr11 58391506 + Exonic hg19 Non-Cancer 61N 2 Out-of-Frame Inter-chr q14.3 127207 ChimerSeq FusionScan GSE122401 ASB3-HNRPLL ASB3 chr2 53977919 - HNRPLL chr2 38818790 - Exonic hg19 Non-Cancer 61N 2 Out-of-Frame Inter-chr p16.2 127208 ChimerSeq FusionScan GSE122401 ASPSCR1-ALDOA ASPSCR1 chr17 79954722 + ALDOA chr16 30078554 + Exonic hg19 Non-Cancer 61N 2 In-Frame Inter-chr q25.3 127209 ChimerSeq FusionScan GSE122401 ATP2C2-COTL1 ATP2C2 chr16 84402320 + COTL1 chr16 84600561 - Exonic hg19 Non-Cancer 61N 3 In-Frame Inter-chr q24.1 127210 ChimerSeq FusionScan GSE122401 B2M-GNAS B2M chr15 45003811 + GNAS chr20 57470666 + Exonic hg19 Non-Cancer 61N 4 In-Frame Inter-chr Oncogene Oncogene 127211 ChimerSeq FusionScan GSE122401 B3GNT2-UGP2 B3GNT2 chr2 62423490 + UGP2 chr2 64083439 + Exonic hg19 Non-Cancer 61N 2 5'UTR-5'UTR Inter-chr p15 127212 ChimerSeq FusionScan GSE122401 BTBD7-TOMM7 BTBD7 chr14 93760203 - TOMM7 chr7 22852804 - Exonic hg19 Non-Cancer 61N 2 Out-of-Frame Inter-chr 127213 ChimerSeq FusionScan GSE122401 BTG2-GNAS BTG2 chr1 203274876 + GNAS chr20 57470666 + Exonic hg19 Non-Cancer 61N 2 In-Frame Inter-chr Tumor suppressor gene q32.1 Oncogene 127214 ChimerSeq FusionScan GSE122401 BTN3A3-BTN3A1 BTN3A3 chr6 26450361 + BTN3A1 chr6 26412639 + Exonic hg19 Non-Cancer 61N 12 In-Frame Inter-chr p22.2 127215 ChimerSeq FusionScan GSE122401 C20orf43-ATP1B1 C20orf43 chr20 55059245 + ATP1B1 chr1 169094121 + Exonic hg19 Non-Cancer 61N 2 Out-of-Frame Inter-chr 127216 ChimerSeq FusionScan GSE122401 C20orf94-MKKS C20orf94 chr20 10416101 + MKKS chr20 10401406 - Exonic hg19 Non-Cancer 61N 2 5'UTR-5'UTR Inter-chr 127217 ChimerSeq FusionScan GSE122401 C6orf106-PRKCB C6orf106 chr6 34574331 - PRKCB chr16 24043456 + Exonic hg19 Non-Cancer 61N 2 In-Frame Inter-chr p21.31 Tumor suppressor gene 127218 ChimerSeq FusionScan GSE122401 CCDC64-TBCE CCDC64 chr12 120436540 + TBCE chr1 235577747 + Exonic hg19 Non-Cancer 61N 2 Out-of-Frame Inter-chr 127219 ChimerSeq FusionScan GSE122401 CDYL-ZNF277 CDYL chr6 4892613 + ZNF277 chr7 111926927 + Exonic hg19 Non-Cancer 61N 2 In-Frame Inter-chr p25.1 Transcription factor 127220 ChimerSeq FusionScan GSE122401 CHIC1-HDAC8 CHIC1 chrX 72804408 + HDAC8 chrX 71571688 - Exonic hg19 Non-Cancer 61N 2 In-Frame Inter-chr q13.2 127221 ChimerSeq FusionScan GSE122401 CHMP5-CTNNA1 CHMP5 chr9 33278223 + CTNNA1 chr5 138264934 + Exonic hg19 Non-Cancer 61N 3 In-Frame Inter-chr p13.3 Oncogene 127222 ChimerSeq FusionScan GSE122401 CLDN18-DHX36 CLDN18 chr3 137743566 + DHX36 chr3 154011601 - Exonic hg19 Non-Cancer 61N 2 Out-of-Frame Inter-chr q22.3 127223 ChimerSeq FusionScan GSE122401 CLTC-IGFBP7 CLTC chr17 57697534 + IGFBP7 chr4 57899477 - Exonic hg19 Non-Cancer 61N 4 In-Frame Inter-chr q23.1 Tumor suppressor gene 127224 ChimerSeq FusionScan GSE122401 CNRIP1-PPP3R1 CNRIP1 chr2 68544288 - PPP3R1 chr2 68444263 - Exonic hg19 Non-Cancer 61N 3 In-Frame Inter-chr p14 127225 ChimerSeq FusionScan GSE122401 COL18A1-RBM12B COL18A1 chr21 46917575 + RBM12B chr8 94749583 - Exonic hg19 Non-Cancer 61N 2 CDS-5'UTR Inter-chr q22.3 127226 ChimerSeq FusionScan GSE122401 CPSF6-BAZ1B CPSF6 chr12 69656342 + BAZ1B chr7 72884813 - Exonic hg19 Non-Cancer 61N 2 3'UTR-CDS Inter-chr q15 127227 ChimerSeq FusionScan GSE122401 CRBN-SLC15A2 CRBN chr3 3196430 - SLC15A2 chr3 121615252 + Exonic hg19 Non-Cancer 61N 2 Out-of-Frame Inter-chr Oncogene p26.2 127228 ChimerSeq FusionScan GSE122401 CTDSP2-MBD2 CTDSP2 chr12 58223230 - MBD2 chr18 51731527 - Exonic hg19 Non-Cancer 61N 2 Out-of-Frame Inter-chr q14.1 Transcription factor 127229 ChimerSeq FusionScan GSE122401 CTNND1-WDR5 CTNND1 chr11 57582972 + WDR5 chr9 137005824 + Exonic hg19 Non-Cancer 61N 2 In-Frame Inter-chr Tumor suppressor gene q12.1 127230 ChimerSeq FusionScan GSE122401 DCAF4-C17orf98 DCAF4 chr14 73423208 + C17orf98 chr17 36993493 - Exonic hg19 Non-Cancer 61N 2 Out-of-Frame Inter-chr q24.2 127231 ChimerSeq FusionScan GSE122401 DEGS2-RFWD2 DEGS2 chr14 100625842 - RFWD2 chr1 176055026 - Exonic hg19 Non-Cancer 61N 2 Out-of-Frame Inter-chr q32.2 Tumor suppressor gene 127232 ChimerSeq FusionScan GSE122401 DICER1-DPF3 DICER1 chr14 95623566 - DPF3 chr14 73238601 - Exonic hg19 Non-Cancer 61N 2 5'UTR-CDS Inter-chr Oncogene Tumor suppressor gene q32.13 Transcription factor 127233 ChimerSeq FusionScan GSE122401 DNM2-ZDHHC7 DNM2 chr19 10916643 + ZDHHC7 chr16 85015600 - Exonic hg19 Non-Cancer 61N 2 In-Frame Inter-chr p13.2 127234 ChimerSeq FusionScan GSE122401 EIF2B5-WASL EIF2B5 chr3 183859858 + WASL chr7 123324634 - Exonic hg19 Non-Cancer 61N 2 Out-of-Frame Inter-chr q27.1 127235 ChimerSeq FusionScan GSE122401 EIF2D-MARC2 EIF2D chr1 206778752 - MARC2 chr1 220957260 + Exonic hg19 Non-Cancer 61N 2 CDS-3'UTR Inter-chr q32.1 127236 ChimerSeq FusionScan GSE122401 EIF3C-STX12 EIF3C chr16 28700149 + STX12 chr1 28116072 + Exonic hg19 Non-Cancer 61N 2 5'UTR-CDS Inter-chr p11.2 127237 ChimerSeq FusionScan GSE122401 EMB-C6orf57 EMB chr5 49723977 - C6orf57 chr6 71289116 + Exonic hg19 Non-Cancer 61N 2 In-Frame Inter-chr q11.1 127238 ChimerSeq FusionScan GSE122401 FAM18B1-FAM18B2-CDRT4 FAM18B1 chr17 18707579 + FAM18B2-CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer 61N 2 CDS-3'UTR Inter-chr 127239 ChimerSeq FusionScan GSE122401 FAM49B-NDRG1 FAM49B chr8 131028615 - NDRG1 chr8 134276895 - Exonic hg19 Non-Cancer 61N 2 3'UTR-CDS Inter-chr q24.21 Tumor suppressor gene 127240 ChimerSeq FusionScan GSE122401 FBN1-EIF3H FBN1 chr15 48888479 - EIF3H chr8 117671219 - Exonic hg19 Non-Cancer 61N 5 In-Frame Inter-chr q21.1 127241 ChimerSeq FusionScan GSE122401 FBXL19-ORAI2 FBXL19 chr16 30958269 + ORAI2 chr7 102086959 + Exonic hg19 Non-Cancer 61N 2 Out-of-Frame Inter-chr Transcription factor p11.2 127242 ChimerSeq FusionScan GSE122401 FCHSD2-ALG5 FCHSD2 chr11 72794739 - ALG5 chr13 37546173 - Exonic hg19 Non-Cancer 61N 2 In-Frame Inter-chr q13.4 127243 ChimerSeq FusionScan GSE122401 FLNB-FXYD3 FLNB chr3 58149057 + FXYD3 chr19 35610266 + Exonic hg19 Non-Cancer 61N 4 In-Frame Inter-chr p14.3 127244 ChimerSeq FusionScan GSE122401 FLNC-FLNB FLNC chr7 128491682 + FLNB chr3 58133932 + Exonic hg19 Non-Cancer 61N 13 In-Frame Inter-chr q32.1 127245 ChimerSeq FusionScan GSE122401 FOXO3-LINC00222 FOXO3 chr6 108986092 + LINC00222 chr6 109080620 + Exonic hg19 Non-Cancer 61N 2 3'UTR-5'UTR Inter-chr Oncogene Tumor suppressor gene Transcription factor q21 127246 ChimerSeq FusionScan GSE122401 GALNT2-PLCE1 GALNT2 chr1 230203153 + PLCE1 chr10 95790439 + Exonic hg19 Non-Cancer 61N 2 CDS-5'UTR Inter-chr q42.13 Tumor suppressor gene 127247 ChimerSeq FusionScan GSE122401 GKN2-GKN1 GKN2 chr2 69179981 - GKN1 chr2 69204626 + Exonic hg19 Non-Cancer 61N 71 In-Frame Inter-chr Tumor suppressor gene p13.3 Tumor suppressor gene 127248 ChimerSeq FusionScan GSE122401 GLG1-HAX1 GLG1 chr16 74493579 - HAX1 chr1 154247868 + Exonic hg19 Non-Cancer 61N 2 In-Frame Inter-chr q23.1 127249 ChimerSeq FusionScan GSE122401 GPR89B-CAPN2 GPR89B chr1 147460753 + CAPN2 chr1 223946971 + Exonic hg19 Non-Cancer 61N 2 In-Frame Inter-chr q21.2 127250 ChimerSeq FusionScan GSE122401 IFI16-YWHAB IFI16 chr1 158990319 + YWHAB chr20 43530171 + Exonic hg19 Non-Cancer 61N 2 CDS-5'UTR Inter-chr Tumor suppressor gene q23.1 127251 ChimerSeq FusionScan GSE122401 IGJ-OCIAD2 IGJ chr4 71527808 - OCIAD2 chr4 48887582 - Exonic hg19 Non-Cancer 61N 35 In-Frame Inter-chr 127252 ChimerSeq FusionScan GSE122401 IGLL5-EEF1D IGLL5 chr22 23230439 + EEF1D chr8 144669022 - Exonic hg19 Non-Cancer 61N 5 In-Frame Inter-chr q11.22 127253 ChimerSeq FusionScan GSE122401 IGLL5-TNS3 IGLL5 chr22 23230439 + TNS3 chr7 47568745 - Exonic hg19 Non-Cancer 61N 2 CDS-5'UTR Inter-chr q11.22 127254 ChimerSeq FusionScan GSE122401 IREB2-UBE2Q2 IREB2 chr15 78732223 + UBE2Q2 chr15 76168527 + Exonic hg19 Non-Cancer 61N 2 Out-of-Frame Inter-chr q25.1 127255 ChimerSeq FusionScan GSE122401 LAMTOR1-NUMA1 LAMTOR1 chr11 71809334 - NUMA1 chr11 71747021 - Exonic hg19 Non-Cancer 61N 2 CDS-5'UTR Inter-chr q13.4 Oncogene 127256 ChimerSeq FusionScan GSE122401 LCK-TMEM206 LCK chr1 32716972 + TMEM206 chr1 212558767 - Exonic hg19 Non-Cancer 61N 2 5'UTR-CDS Inter-chr TK:Src Oncogene p35.2 127257 ChimerSeq FusionScan GSE122401 LEPREL4-KRT19 LEPREL4 chr17 39963047 - KRT19 chr17 39681525 - Exonic hg19 Non-Cancer 61N 3 In-Frame Inter-chr Tumor suppressor gene 127258 ChimerSeq FusionScan GSE122401 LRP5-LRP4 LRP5 chr11 68115711 + LRP4 chr11 46897517 - Exonic hg19 Non-Cancer 61N 14 In-Frame Inter-chr q13.2 127259 ChimerSeq FusionScan GSE122401 LRP5-LRP6 LRP5 chr11 68115711 + LRP6 chr12 12356334 - Exonic hg19 Non-Cancer 61N 39 In-Frame Inter-chr q13.2 127260 ChimerSeq FusionScan GSE122401 LRP5-SUV420H1 LRP5 chr11 68115711 + SUV420H1 chr11 67957619 - Exonic hg19 Non-Cancer 61N 2 CDS-5'UTR Inter-chr q13.2 127261 ChimerSeq FusionScan GSE122401 MAD1L1-MAEA MAD1L1 chr7 2188786 - MAEA chr4 1326544 + Exonic hg19 Non-Cancer 61N 3 In-Frame Inter-chr Tumor suppressor gene p22.3 127262 ChimerSeq FusionScan GSE122401 MAPK10-MAPK8 MAPK10 chr4 87022204 - MAPK8 chr10 49632556 + Exonic hg19 Non-Cancer 61N 36 In-Frame Inter-chr Tumor suppressor gene q21.3 Oncogene 127263 ChimerSeq FusionScan GSE122401 MATR3-C6orf70 MATR3 chr5 138629494 + C6orf70 chr6 170153959 + Exonic hg19 Non-Cancer 61N 2 5'UTR-CDS Inter-chr q31.2 127264 ChimerSeq FusionScan GSE122401 MBOAT1-CUL4A MBOAT1 chr6 20109828 - CUL4A chr13 113873258 + Exonic hg19 Non-Cancer 61N 3 Out-of-Frame Inter-chr p22.3 127265 ChimerSeq FusionScan GSE122401 MGAT4A-MGAT4B MGAT4A chr2 99261890 - MGAT4B chr5 179226636 - Exonic hg19 Non-Cancer 61N 104 In-Frame Inter-chr q11.2 127266 ChimerSeq FusionScan GSE122401 MGC2752-IL9R MGC2752 chr19 59086955 + IL9R chrY 59337948 + Exonic hg19 Non-Cancer 61N 8 5'UTR-5'UTR Inter-chr 127267 ChimerSeq FusionScan GSE122401 MGLL-CAPZA1 MGLL chr3 127413817 - CAPZA1 chr1 113196219 + Exonic hg19 Non-Cancer 61N 3 Out-of-Frame Inter-chr q21.3 127268 ChimerSeq FusionScan GSE122401 MPRIP-GPBP1L1 MPRIP chr17 16981390 + GPBP1L1 chr1 46108171 - Exonic hg19 Non-Cancer 61N 5 In-Frame Inter-chr p11.2 Transcription factor 127269 ChimerSeq FusionScan GSE122401 NCOA4-TIMM23 NCOA4 chr10 51586411 + TIMM23 chr10 51592619 - Exonic hg19 Non-Cancer 61N 7 Out-of-Frame Inter-chr Oncogene Tumor suppressor gene q11.22 127270 ChimerSeq FusionScan GSE122401 NCOR1-CENPV NCOR1 chr17 16118675 - CENPV chr17 16248025 - Exonic hg19 Non-Cancer 61N 2 5'UTR-CDS Inter-chr Oncogene p11.2 127271 ChimerSeq FusionScan GSE122401 NDUFV3-RPS10 NDUFV3 chr21 44317157 + RPS10 chr6 34389584 - Exonic hg19 Non-Cancer 61N 4 In-Frame Inter-chr q22.3 127272 ChimerSeq FusionScan GSE122401 NME1-NME2-SPAG9 NME1-NME2 chr17 49245704 + SPAG9 chr17 49098726 - Exonic hg19 Non-Cancer 61N 2 Out-of-Frame Inter-chr Tumor suppressor gene q21.33 Transcription factor 127273 ChimerSeq FusionScan GSE122401 NOP14-GNAS NOP14 chr4 2958396 - GNAS chr20 57470666 + Exonic hg19 Non-Cancer 61N 2 In-Frame Inter-chr p16.3 Oncogene 127274 ChimerSeq FusionScan GSE122401 NR2F6-DCTD NR2F6 chr19 17355751 - DCTD chr4 183836728 - Exonic hg19 Non-Cancer 61N 2 In-Frame Inter-chr Transcription factor p13.11 127275 ChimerSeq FusionScan GSE122401 NUMB-ING3 NUMB chr14 73925198 - ING3 chr7 120604795 + Exonic hg19 Non-Cancer 61N 2 5'UTR-CDS Inter-chr Tumor suppressor gene q24.3 Tumor suppressor gene 127276 ChimerSeq FusionScan GSE122401 OLA1-LINC00152 OLA1 chr2 174945879 - LINC00152 chr2 87820725 + Exonic hg19 Non-Cancer 61N 2 CDS-5'UTR Inter-chr q31.1 127277 ChimerSeq FusionScan GSE122401 OTUB1-IRF7 OTUB1 chr11 63764120 + IRF7 chr11 612800 - Exonic hg19 Non-Cancer 61N 17 Out-of-Frame Inter-chr q13.1 Transcription factor 127278 ChimerSeq FusionScan GSE122401 PDZD8-GRK5 PDZD8 chr10 119078382 - GRK5 chr10 121189886 + Exonic hg19 Non-Cancer 61N 2 Out-of-Frame Inter-chr q26.11 127279 ChimerSeq FusionScan GSE122401 PLEKHM1-SLC16A6 PLEKHM1 chr17 43527983 - SLC16A6 chr17 66265487 - Exonic hg19 Non-Cancer 61N 8 5'UTR-CDS Inter-chr 127280 ChimerSeq FusionScan GSE122401 POLR2J-NAPEPLD POLR2J chr7 102119254 - NAPEPLD chr7 102769239 - Exonic hg19 Non-Cancer 61N 2 CDS-5'UTR Inter-chr q22.1 Tumor suppressor gene 127281 ChimerSeq FusionScan GSE122401 POP1-SNRPA1 POP1 chr8 99129618 + SNRPA1 chr15 101827907 - Exonic hg19 Non-Cancer 61N 2 5'UTR-CDS Inter-chr q22.2 127282 ChimerSeq FusionScan GSE122401 PRCD-FUS PRCD chr17 74536655 + FUS chr16 31199645 + Exonic hg19 Non-Cancer 61N 3 Out-of-Frame Inter-chr q25.1 Tumor suppressor gene 127283 ChimerSeq FusionScan GSE122401 PROM1-C4orf34 PROM1 chr4 16077309 - C4orf34 chr4 39606800 - Exonic hg19 Non-Cancer 61N 2 CDS-5'UTR Inter-chr p15.32 127284 ChimerSeq FusionScan GSE122401 PTGDS-ACTG1 PTGDS chr9 139872144 + ACTG1 chr17 79478652 - Exonic hg19 Non-Cancer 61N 5 In-Frame Inter-chr q34.3 127285 ChimerSeq FusionScan GSE122401 RAB3IP-CHD1L RAB3IP chr12 70150443 + CHD1L chr1 146736080 + Exonic hg19 Non-Cancer 61N 2 In-Frame Inter-chr q15 127286 ChimerSeq FusionScan GSE122401 RAD23B-PTBP3 RAD23B chr9 110074018 + PTBP3 chr9 115038293 - Exonic hg19 Non-Cancer 61N 2 In-Frame Inter-chr Tumor suppressor gene q31.2 127287 ChimerSeq FusionScan GSE122401 RNF207-ICMT RNF207 chr1 6278429 + ICMT chr1 6293703 - Exonic hg19 Non-Cancer 61N 2 In-Frame Inter-chr p36.31 127288 ChimerSeq FusionScan GSE122401 RNF31-MICALL2 RNF31 chr14 24620097 + MICALL2 chr7 1474308 - Exonic hg19 Non-Cancer 61N 2 Out-of-Frame Inter-chr q12 127289 ChimerSeq FusionScan GSE122401 S100PBP-SNIP1 S100PBP chr1 33283290 + SNIP1 chr1 38006356 - Exonic hg19 Non-Cancer 61N 2 5'UTR-CDS Inter-chr p35.1 127290 ChimerSeq FusionScan GSE122401 SESN1-FOXO3 SESN1 chr6 109414997 - FOXO3 chr6 108984657 + Exonic hg19 Non-Cancer 61N 2 In-Frame Inter-chr q21 Oncogene Tumor suppressor gene Transcription factor 127291 ChimerSeq FusionScan GSE122401 SIGIRR-PTDSS2 SIGIRR chr11 414822 - PTDSS2 chr11 460186 + Exonic hg19 Non-Cancer 61N 2 5'UTR-CDS Inter-chr p15.5 127292 ChimerSeq FusionScan GSE122401 SLC22A15-MGEA5 SLC22A15 chr1 116580009 + MGEA5 chr10 103553755 - Exonic hg19 Non-Cancer 61N 4 In-Frame Inter-chr p13.1 127293 ChimerSeq FusionScan GSE122401 SLC25A43-SLC25A5 SLC25A43 chrX 118533641 + SLC25A5 chrX 118603623 + Exonic hg19 Non-Cancer 61N 2 Out-of-Frame Inter-chr q24 127294 ChimerSeq FusionScan GSE122401 SLC25A43-SLC25A5 SLC25A43 chrX 118533641 + SLC25A5 chrX 118604335 + Exonic hg19 Non-Cancer 61N 2 Out-of-Frame Inter-chr q24 127295 ChimerSeq FusionScan GSE122401 SLC28A2-SPATA5L1 SLC28A2 chr15 45545718 + SPATA5L1 chr15 45713240 + Exonic hg19 Non-Cancer 61N 4 Out-of-Frame Inter-chr q21.1 127296 ChimerSeq FusionScan GSE122401 SLC35A3-SHARPIN SLC35A3 chr1 100483371 + SHARPIN chr8 145158128 - Exonic hg19 Non-Cancer 61N 2 Out-of-Frame Inter-chr p21.2 127297 ChimerSeq FusionScan GSE122401 SLC7A5-TSEN54 SLC7A5 chr16 87902490 - TSEN54 chr17 73519355 + Exonic hg19 Non-Cancer 61N 3 In-Frame Inter-chr q24.2 127298 ChimerSeq FusionScan GSE122401 SOLH-TMEM8A SOLH chr16 586142 + TMEM8A chr16 427848 - Exonic hg19 Non-Cancer 61N 2 5'UTR-CDS Inter-chr 127299 ChimerSeq FusionScan GSE122401 STK24-ANO2 STK24 chr13 99171496 - ANO2 chr12 5756967 - Exonic hg19 Non-Cancer 61N 2 In-Frame Inter-chr q32.2 127300 ChimerSeq FusionScan GSE122401 SULT1C2-ACVR1 SULT1C2 chr2 108910810 + ACVR1 chr2 158622708 - Exonic hg19 Non-Cancer 61N 3 In-Frame Inter-chr q12.3 127301 ChimerSeq FusionScan GSE122401 SWAP70-SDC4 SWAP70 chr11 9685825 + SDC4 chr20 43961709 - Exonic hg19 Non-Cancer 61N 2 Out-of-Frame Inter-chr p15.4 127302 ChimerSeq FusionScan GSE122401 TCF7L1-TCF7 TCF7L1 chr2 85533682 + TCF7 chr5 133479282 + Exonic hg19 Non-Cancer 61N 23 In-Frame Inter-chr Oncogene Transcription factor p11.2 Transcription factor 127303 ChimerSeq FusionScan GSE122401 TMBIM6-ARPC3 TMBIM6 chr12 50149538 + ARPC3 chr12 110878193 - Exonic hg19 Non-Cancer 61N 4 In-Frame Inter-chr q13.12 127304 ChimerSeq FusionScan GSE122401 TPM2-PDLIM7 TPM2 chr9 35685060 - PDLIM7 chr5 176918926 - Exonic hg19 Non-Cancer 61N 6 In-Frame Inter-chr p13.3 127305 ChimerSeq FusionScan GSE122401 TRIM25-DDX17 TRIM25 chr17 54990752 - DDX17 chr22 38897285 - Exonic hg19 Non-Cancer 61N 2 Out-of-Frame Inter-chr q22 127306 ChimerSeq FusionScan GSE122401 UBAC1-TBCD UBAC1 chr9 138852870 - TBCD chr17 80755632 + Exonic hg19 Non-Cancer 61N 2 In-Frame Inter-chr q34.3 127307 ChimerSeq FusionScan GSE122401 UNG-ALKBH2 UNG chr12 109537089 + ALKBH2 chr12 109526317 - Exonic hg19 Non-Cancer 61N 2 Out-of-Frame Inter-chr q24.11 127308 ChimerSeq FusionScan GSE122401 USP6NL-NSUN6 USP6NL chr10 11653441 - NSUN6 chr10 18905222 - Exonic hg19 Non-Cancer 61N 2 5'UTR-CDS Inter-chr p14 127309 ChimerSeq FusionScan GSE122401 UTY-KDM6A UTY chrY 15470343 - KDM6A chrX 44920568 + Exonic hg19 Non-Cancer 61N 20 In-Frame Inter-chr q11.221 Oncogene Tumor suppressor gene 127310 ChimerSeq FusionScan GSE122401 VGLL4-ATG7 VGLL4 chr3 11606270 - ATG7 chr3 11596284 + Exonic hg19 Non-Cancer 61N 2 In-Frame Inter-chr p25.2 127311 ChimerSeq FusionScan GSE122401 XIAP-RNF213 XIAP chrX 122994143 + RNF213 chr17 78290987 + Exonic hg19 Non-Cancer 61N 2 5'UTR-CDS Inter-chr q25 Oncogene 127312 ChimerSeq FusionScan GSE122401 ZFYVE21-KLC1 ZFYVE21 chr14 104182316 + KLC1 chr14 104166991 + Exonic hg19 Non-Cancer 61N 2 In-Frame Inter-chr q32.33 127313 ChimerSeq FusionScan GSE122401 ZNF124-MTG1 ZNF124 chr1 247335149 - MTG1 chr10 135232983 + Exonic hg19 Non-Cancer 61N 2 Out-of-Frame Inter-chr Transcription factor q44 127314 ChimerSeq FusionScan GSE122401 ZNF148-MSI2 ZNF148 chr3 125032151 - MSI2 chr17 55478739 + Exonic hg19 Non-Cancer 61N 2 In-Frame Inter-chr Transcription factor q21.2 127315 ChimerSeq FusionScan GSE122401 ZNF417-ZNF587B ZNF417 chr19 58427746 - ZNF587B chr19 58350390 + Exonic hg19 Non-Cancer 61N 14 In-Frame Inter-chr Transcription factor q13.43 Transcription factor 127316 ChimerSeq FusionScan GSE122401 ZNF443-HMGB1 ZNF443 chr19 12551725 - HMGB1 chr13 31037831 - Exonic hg19 Non-Cancer 61N 3 CDS-5'UTR Inter-chr Transcription factor p13.2 127317 ChimerSeq FusionScan GSE122401 ZNF606-MED15 ZNF606 chr19 58511175 - MED15 chr22 20929399 + Exonic hg19 Non-Cancer 61N 3 In-Frame Inter-chr Transcription factor q13.43 127318 ChimerSeq FusionScan GSE122401 HSF1-CPSF3L HSF1 chr8 145537302 + CPSF3L chr1 1250998 - Exonic hg19 Non-Cancer 67N 2 In-Frame Inter-chr Transcription factor q24.3 127319 ChimerSeq FusionScan GSE122401 MAML3-PHF17 MAML3 chr4 141074013 - PHF17 chr4 129752887 + Exonic hg19 Non-Cancer 67N 2 CDS-5'UTR Inter-chr q31.1 127320 ChimerSeq FusionScan GSE122401 WSB1-AGXT2L1 WSB1 chr17 25636298 + AGXT2L1 chr4 109670619 - Exonic hg19 Non-Cancer 67N 2 In-Frame Inter-chr q11.1 127321 ChimerSeq FusionScan GSE122401 C22orf23-CD320 C22orf23 chr22 38340423 - CD320 chr19 8368972 - Exonic hg19 Non-Cancer 91N 2 Out-of-Frame Inter-chr q13.1 127322 ChimerSeq FusionScan GSE122401 DIDO1-PSMA7 DIDO1 chr20 61538498 - PSMA7 chr20 60716000 - Exonic hg19 Non-Cancer 91N 2 In-Frame Inter-chr Tumor suppressor gene q13.33 127323 ChimerSeq FusionScan GSE122401 ERN2-UBE2K ERN2 chr16 23711859 - UBE2K chr4 39776453 + Exonic hg19 Non-Cancer 91N 2 Out-of-Frame Inter-chr p12.2 127324 ChimerSeq FusionScan GSE122401 FAM102A-PPP6R2 FAM102A chr9 130742270 - PPP6R2 chr22 50810448 + Exonic hg19 Non-Cancer 91N 2 CDS-5'UTR Inter-chr q34.11 127325 ChimerSeq FusionScan GSE122401 FAM171A1-WDR37 FAM171A1 chr10 15325876 - WDR37 chr10 1125950 + Exonic hg19 Non-Cancer 91N 2 In-Frame Inter-chr p13 127326 ChimerSeq FusionScan GSE122401 KDM6A-PGBD2 KDM6A chrX 44938596 + PGBD2 chr1 249211477 + Exonic hg19 Non-Cancer 91N 2 CDS-5'UTR Inter-chr Oncogene Tumor suppressor gene p11.3 127327 ChimerSeq FusionScan GSE122401 LAD1-PLD3 LAD1 chr1 201355462 - PLD3 chr19 40883692 + Exonic hg19 Non-Cancer 91N 2 In-Frame Inter-chr q32.1 127328 ChimerSeq FusionScan GSE122401 PIGR-CLINT1 PIGR chr1 207110439 - CLINT1 chr5 157221980 - Exonic hg19 Non-Cancer 91N 2 In-Frame Inter-chr q32.1 127329 ChimerSeq FusionScan GSE122401 RORA-ATP8B4 RORA chr15 60884585 - ATP8B4 chr15 50158681 - Exonic hg19 Non-Cancer 91N 2 Out-of-Frame Inter-chr Transcription factor q22.2 127330 ChimerSeq FusionScan GSE122401 SEC14L1-PRPSAP1 SEC14L1 chr17 75089429 + PRPSAP1 chr17 74309972 - Exonic hg19 Non-Cancer 91N 2 5'UTR-CDS Inter-chr q25.2 127331 ChimerSeq FusionScan GSE122401 TRNAU1AP-TIA1 TRNAU1AP chr1 28887244 + TIA1 chr2 70441626 - Exonic hg19 Non-Cancer 91N 2 In-Frame Inter-chr p35.3 127332 ChimerSeq FusionScan GSE122401 ARFGEF2-NDUFB2 ARFGEF2 chr20 47538547 + NDUFB2 chr7 140402665 + Exonic hg19 Non-Cancer 95N 2 Out-of-Frame Inter-chr q13.13 127333 ChimerSeq FusionScan GSE122401 MKL2-DMD MKL2 chr16 14234617 + DMD chrX 31201021 - Exonic hg19 Non-Cancer 95N 2 Out-of-Frame Inter-chr p13.12 Tumor suppressor gene 127334 ChimerSeq FusionScan GSE122401 NOTCH2-EIF3E NOTCH2 chr1 120611947 - EIF3E chr8 109215732 - Exonic hg19 Non-Cancer 95N 2 Out-of-Frame Inter-chr Oncogene Tumor suppressor gene p12 127335 ChimerSeq FusionScan GSE122401 TMEM87A-SSFA2 TMEM87A chr15 42525410 - SSFA2 chr2 182786674 + Exonic hg19 Non-Cancer 95N 2 In-Frame Inter-chr q15.1 127336 ChimerSeq FusionScan GSE122401 TOX3-FAM149A TOX3 chr16 52580548 - FAM149A chr4 187070326 + Exonic hg19 Non-Cancer 95N 2 CDS-5'UTR Inter-chr q12.1 127337 ChimerSeq FusionScan Gastric_norma JMJD1C-CCDC50 JMJD1C chr10 65140077 - CCDC50 chr3 191097947 + Exonic hg19 Non-Cancer NT21 2 Out-of-Frame Inter-chr q21.3 127338 ChimerSeq FusionScan Gastric_norma VPS13A-GKAP1 VPS13A chr9 79843180 + GKAP1 chr9 86383885 - Exonic hg19 Non-Cancer NT21 2 Out-of-Frame Inter-chr q21.2 127339 ChimerSeq FusionScan Gastric_norma UBA1-UBA7 UBA1 chrX 47071911 + UBA7 chr3 49845545 - Exonic hg19 Non-Cancer NT15 2 In-Frame Inter-chr p11.3 127340 ChimerSeq FusionScan Gastric_norma GAK-GET4 GAK chr4 905460 - GET4 chr7 925692 + Exonic hg19 Non-Cancer NT15 2 Out-of-Frame Inter-chr Other:NAK p16.3 127341 ChimerSeq FusionScan Lung_normal RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer SPNT_197 3 Out-of-Frame Inter-chr q13.2 127342 ChimerSeq FusionScan Lung_normal BTN3A3-BTN3A1 BTN3A3 chr6 26450361 + BTN3A1 chr6 26412639 + Exonic hg19 Non-Cancer SPNT_197 2 In-Frame Inter-chr p22.2 127343 ChimerSeq FusionScan Lung_normal ZNF788-ZNF763 ZNF788 chr19 12221246 + ZNF763 chr19 12088185 + Exonic hg19 Non-Cancer SPNT_231 3 5'UTR-CDS Inter-chr Transcription factor p13.2 Transcription factor 127344 ChimerSeq FusionScan Lung_normal RGPD1-GCC2 RGPD1 chr2 87224881 + GCC2 chr2 109100604 + Exonic hg19 Non-Cancer SPNT_231 2 Out-of-Frame Inter-chr p11.2 127345 ChimerSeq FusionScan Lung_normal CYP4B1-CYP4X1 CYP4B1 chr1 47280936 + CYP4X1 chr1 47495661 + Exonic hg19 Non-Cancer SPNT_231 2 Out-of-Frame Inter-chr p33 127346 ChimerSeq FusionScan Lung_normal KLHDC10-TMEM116 KLHDC10 chr7 129710649 + TMEM116 chr12 112381173 - Exonic hg19 Non-Cancer SPNT_367 2 Out-of-Frame Inter-chr q32.2 127347 ChimerSeq FusionScan Lung_normal RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer SPNT_367 2 Out-of-Frame Inter-chr q13.2 127348 ChimerSeq FusionScan Lung_normal ZNF525-ZNF761 ZNF525 chr19 53869012 + ZNF761 chr19 53950448 + Exonic hg19 Non-Cancer SPNT_367 2 5'UTR-5'UTR Inter-chr Transcription factor q13.42 Transcription factor 127349 ChimerSeq FusionScan Lung_normal SBNO2-STK11 SBNO2 chr19 1174170 - STK11 chr19 1218415 + Exonic hg19 Non-Cancer SPNT_367 2 5'UTR-CDS Inter-chr p13.3 Oncogene Tumor suppressor gene 127350 ChimerSeq FusionScan Lung_normal FAM162B-ZUFSP FAM162B chr6 117083139 - ZUFSP chr6 116988370 - Exonic hg19 Non-Cancer SPNT_367 2 CDS-5'UTR Inter-chr q22.1 Transcription factor 127351 ChimerSeq FusionScan Lung_normal CYP4B1-CYP4X1 CYP4B1 chr1 47282853 + CYP4X1 chr1 47495661 + Exonic hg19 Non-Cancer SPNT_209 2 Out-of-Frame Inter-chr p33 127352 ChimerSeq FusionScan Lung_normal RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer SPNT_220 2 Out-of-Frame Inter-chr q13.2 127353 ChimerSeq FusionScan Lung_normal POM121-RBAK-LOC389458 POM121 chr7 72361649 + RBAK-LOC389458 chr7 5087663 + Exonic hg19 Non-Cancer SPNT_295 2 5'UTR-5'UTR Inter-chr q11.23 Transcription factor 127354 ChimerSeq FusionScan Lung_normal RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer SPNT_297 2 Out-of-Frame Inter-chr q13.2 127355 ChimerSeq FusionScan Lung_normal SLC7A5-SMG1 SLC7A5 chr16 87902490 - SMG1 chr16 18908278 - Exonic hg19 Non-Cancer SPNT_297 2 Out-of-Frame Inter-chr q24.2 Atypical:PIKK 127356 ChimerSeq FusionScan Lung_normal ANKRD24-DAPK3 ANKRD24 chr19 4210369 + DAPK3 chr19 3964989 - Exonic hg19 Non-Cancer SPNT_312 2 Out-of-Frame Inter-chr p13.3 CAMK:DAPK Tumor suppressor gene 127357 ChimerSeq FusionScan Lung_normal CYP4B1-CYP4X1 CYP4B1 chr1 47280936 + CYP4X1 chr1 47495661 + Exonic hg19 Non-Cancer SPNT_312 2 Out-of-Frame Inter-chr p33 127358 ChimerSeq FusionScan Lung_normal TYW1-TYW1B TYW1 chr7 66548526 + TYW1B chr7 72209578 - Exonic hg19 Non-Cancer SPNT_206 3 Out-of-Frame Inter-chr q11.21 127359 ChimerSeq FusionScan Lung_normal CYP4B1-CYP4X1 CYP4B1 chr1 47280936 + CYP4X1 chr1 47495661 + Exonic hg19 Non-Cancer SPNT_206 3 Out-of-Frame Inter-chr p33 127360 ChimerSeq FusionScan Lung_normal CLN8-ARHGEF10 CLN8 chr8 1719763 + ARHGEF10 chr8 1791518 + Exonic hg19 Non-Cancer SPNT_206 2 CDS-5'UTR Inter-chr p23.3 127361 ChimerSeq FusionScan Lung_normal RABL2B-RABL2A RABL2B chr22 51214199 - RABL2A chr2 114390491 + Exonic hg19 Non-Cancer SPNT_206 2 Out-of-Frame Inter-chr q13.33 127362 ChimerSeq FusionScan Lung_normal MMP14-CUX1 MMP14 chr14 23306134 + CUX1 chr7 101559394 + Exonic hg19 Non-Cancer SPNT_206 2 In-Frame Inter-chr q11.2 Tumor suppressor gene Transcription factor 127363 ChimerSeq FusionScan Lung_normal HACL1-COLQ HACL1 chr3 15604864 - COLQ chr3 15531144 - Exonic hg19 Non-Cancer SPNT_213 2 Out-of-Frame Inter-chr p25.1 127364 ChimerSeq FusionScan Lung_normal FKBP1A-SDCBP2 FKBP1A chr20 1352719 - SDCBP2 chr20 1301079 - Exonic hg19 Non-Cancer SPNT_222 2 CDS-5'UTR Inter-chr p13 127365 ChimerSeq FusionScan Lung_normal CPQ-WDFY2 CPQ chr8 97657630 + WDFY2 chr13 52329493 + Exonic hg19 Non-Cancer SPNT_222 2 5'UTR-CDS Inter-chr q22.1 127366 ChimerSeq FusionScan Lung_normal ZNF525-ZNF761 ZNF525 chr19 53869012 + ZNF761 chr19 53950448 + Exonic hg19 Non-Cancer SPNT_228 2 5'UTR-5'UTR Inter-chr Transcription factor q13.42 Transcription factor 127367 ChimerSeq FusionScan Lung_normal SLC7A5-SMG1 SLC7A5 chr16 87902490 - SMG1 chr16 18908278 - Exonic hg19 Non-Cancer SPNT_228 2 Out-of-Frame Inter-chr q24.2 Atypical:PIKK 127368 ChimerSeq FusionScan Lung_normal FRMD3-PCMTD1 FRMD3 chr9 86004518 - PCMTD1 chr8 52746249 - Exonic hg19 Non-Cancer SPNT_228 2 Out-of-Frame Inter-chr q21.32 127369 ChimerSeq FusionScan Lung_normal RGPD1-RANBP2 RGPD1 chr2 87203413 + RANBP2 chr2 109369453 + Exonic hg19 Non-Cancer SPNT_228 2 In-Frame Inter-chr p11.2 127370 ChimerSeq FusionScan Lung_normal NKTR-ULK4 NKTR chr3 42642556 + ULK4 chr3 41705190 - Exonic hg19 Non-Cancer SPNT_228 2 Out-of-Frame Inter-chr p22.1 Other:ULK 127371 ChimerSeq FusionScan Lung_normal RGPD1-RGPD8 RGPD1 chr2 87203413 + RGPD8 chr2 113157771 - Exonic hg19 Non-Cancer SPNT_304 2 In-Frame Inter-chr p11.2 127372 ChimerSeq FusionScan Lung_normal RGPD1-RGPD5 RGPD1 chr2 87203413 + RGPD5 chr2 110583452 + Exonic hg19 Non-Cancer SPNT_304 2 In-Frame Inter-chr p11.2 127373 ChimerSeq FusionScan Lung_normal HECA-MAP3K7 HECA chr6 139456804 + MAP3K7 chr6 91233502 - Exonic hg19 Non-Cancer SPNT_369 2 Out-of-Frame Inter-chr Tumor suppressor gene q24.1 STE:STE11 Oncogene 127374 ChimerSeq FusionScan Lung_normal RCC1-UBE2D2 RCC1 chr1 28834672 + UBE2D2 chr5 138979956 + Exonic hg19 Non-Cancer SPNT_369 2 5'UTR-5'UTR Inter-chr p35.3 127375 ChimerSeq FusionScan Lung_normal SPOCK1-FAM53C SPOCK1 chr5 136834061 - FAM53C chr5 137676872 + Exonic hg19 Non-Cancer SPNT_369 2 CDS-5'UTR Inter-chr q31.2 127376 ChimerSeq FusionScan Lung_normal CRAMP1L-RPL8 CRAMP1L chr16 1716601 + RPL8 chr8 146015855 - Exonic hg19 Non-Cancer SPNT_369 2 Out-of-Frame Inter-chr 127377 ChimerSeq FusionScan Lung_normal ATRX-KDM6B ATRX chrX 77041467 - KDM6B chr17 7748218 + Exonic hg19 Non-Cancer SPNT_212 2 CDS-5'UTR Inter-chr Oncogene q21.1 127378 ChimerSeq FusionScan Lung_normal RANBP2-PRKCH RANBP2 chr2 109336134 + PRKCH chr14 61909828 + Exonic hg19 Non-Cancer SPNT_245 2 Out-of-Frame Inter-chr q13 127379 ChimerSeq FusionScan Lung_normal PCMTD2-LINC00265 PCMTD2 chr20 62899363 + LINC00265 chr7 39828952 + Exonic hg19 Non-Cancer SPNT_245 2 CDS-5'UTR Inter-chr 127380 ChimerSeq FusionScan Lung_normal LINC00189-BACH1 LINC00189 chr21 30566581 + BACH1 chr21 30693541 + Exonic hg19 Non-Cancer SPNT_355 2 5'UTR-5'UTR Inter-chr q21.3 Transcription factor 127381 ChimerSeq FusionScan Lung_normal ENTPD4-LOXL2 ENTPD4 chr8 23291829 - LOXL2 chr8 23225947 - Exonic hg19 Non-Cancer SPNT_082 2 CDS-5'UTR Inter-chr p21.3 127382 ChimerSeq FusionScan Lung_normal SOX7-RP1L1 SOX7 chr8 10587705 - RP1L1 chr8 10480730 - Exonic hg19 Non-Cancer SPNT_185 2 CDS-5'UTR Inter-chr Tumor suppressor gene Transcription factor p23.1 127383 ChimerSeq FusionScan Lung_normal BTN3A3-BTN3A1 BTN3A3 chr6 26450361 + BTN3A1 chr6 26412639 + Exonic hg19 Non-Cancer SPNT_185 2 In-Frame Inter-chr p22.2 127384 ChimerSeq FusionScan Lung_normal HNRNPH3-HNRNPH1 HNRNPH3 chr10 70097753 + HNRNPH1 chr5 179045324 - Exonic hg19 Non-Cancer SPNT_185 2 In-Frame Inter-chr q21.3 127385 ChimerSeq FusionScan Lung_normal TYW1-TYW1B TYW1 chr7 66548526 + TYW1B chr7 72209578 - Exonic hg19 Non-Cancer SPNT_185 2 Out-of-Frame Inter-chr q11.21 127386 ChimerSeq FusionScan Lung_normal BTN3A3-BTN3A1 BTN3A3 chr6 26450361 + BTN3A1 chr6 26412639 + Exonic hg19 Non-Cancer SPNT_215 3 In-Frame Inter-chr p22.2 127387 ChimerSeq FusionScan Lung_normal ATF2-TRIP12 ATF2 chr2 175976295 - TRIP12 chr2 230744844 - Exonic hg19 Non-Cancer SPNT_215 2 CDS-5'UTR Inter-chr Transcription factor q31.1 127388 ChimerSeq FusionScan Lung_normal ST7-CAPZA2 ST7 chr7 116593745 + CAPZA2 chr7 116556113 + Exonic hg19 Non-Cancer SPNT_244 9 Out-of-Frame Inter-chr Tumor suppressor gene q31.2 127389 ChimerSeq FusionScan Lung_normal HACL1-COLQ HACL1 chr3 15604864 - COLQ chr3 15531144 - Exonic hg19 Non-Cancer SPNT_244 4 Out-of-Frame Inter-chr p25.1 127390 ChimerSeq FusionScan Lung_normal FAM184A-CREBRF FAM184A chr6 119324063 - CREBRF chr5 172517317 + Exonic hg19 Non-Cancer SPNT_244 2 In-Frame Inter-chr q22.31 127391 ChimerSeq FusionScan Lung_normal FAM162B-ZUFSP FAM162B chr6 117083139 - ZUFSP chr6 116988370 - Exonic hg19 Non-Cancer SPNT_244 2 CDS-5'UTR Inter-chr q22.1 Transcription factor 127392 ChimerSeq FusionScan Lung_normal ENO3-ASXL2 ENO3 chr17 4859438 + ASXL2 chr2 26068432 - Exonic hg19 Non-Cancer SPNT_244 2 Out-of-Frame Inter-chr p13.2 127393 ChimerSeq FusionScan Lung_normal RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer SPNT_290 2 Out-of-Frame Inter-chr q13.2 127394 ChimerSeq FusionScan Lung_normal RAB31-PPP4R1 RAB31 chr18 9708441 + PPP4R1 chr18 9577189 - Exonic hg19 Non-Cancer SPNT_290 2 In-Frame Inter-chr p11.22 127395 ChimerSeq FusionScan Lung_normal CACNA1C-LRP6 CACNA1C chr12 2229596 + LRP6 chr12 12340053 - Exonic hg19 Non-Cancer SPNT_284 2 Out-of-Frame Inter-chr p13.33 127396 ChimerSeq FusionScan Lung_normal BTN3A3-BTN3A1 BTN3A3 chr6 26450361 + BTN3A1 chr6 26412639 + Exonic hg19 Non-Cancer SPNT_284 2 In-Frame Inter-chr p22.2 127397 ChimerSeq FusionScan Lung_normal SLC7A5-SMG1 SLC7A5 chr16 87902490 - SMG1 chr16 18900907 - Exonic hg19 Non-Cancer SPNT_217 2 Out-of-Frame Inter-chr q24.2 Atypical:PIKK 127398 ChimerSeq FusionScan Lung_normal CAMKMT-NEBL CAMKMT chr2 44617444 + NEBL chr10 21076237 - Exonic hg19 Non-Cancer SPNT_217 2 In-Frame Inter-chr p21 127399 ChimerSeq FusionScan Lung_normal CYP4B1-CYP4X1 CYP4B1 chr1 47280936 + CYP4X1 chr1 47495661 + Exonic hg19 Non-Cancer SPNT_217 2 Out-of-Frame Inter-chr p33 127400 ChimerSeq FusionScan Lung_normal CYP4B1-CYP4X1 CYP4B1 chr1 47280936 + CYP4X1 chr1 47495661 + Exonic hg19 Non-Cancer SPNT_214 3 Out-of-Frame Inter-chr p33 127401 ChimerSeq FusionScan Lung_normal BTN3A3-BTN3A2 BTN3A3 chr6 26450361 + BTN3A2 chr6 26376024 + Exonic hg19 Non-Cancer SPNT_214 2 CDS-3'UTR Inter-chr p22.2 127402 ChimerSeq FusionScan Lung_normal FAM18B1-FAM18B2-CDRT4 FAM18B1 chr17 18707579 + FAM18B2-CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer SPNT_214 2 CDS-3'UTR Inter-chr 127403 ChimerSeq FusionScan Lung_normal DAB2IP-ATXN1 DAB2IP chr9 124461737 + ATXN1 chr6 16307090 - Exonic hg19 Non-Cancer SPNT_276 2 Out-of-Frame Inter-chr Tumor suppressor gene q33.2 127404 ChimerSeq FusionScan Lung_normal MAPK10-MAPK8 MAPK10 chr4 87022204 - MAPK8 chr10 49632556 + Exonic hg19 Non-Cancer SPNT_276 2 In-Frame Inter-chr Tumor suppressor gene q21.3 Oncogene 127405 ChimerSeq FusionScan Lung_normal EXD3-NACC2 EXD3 chr9 140218176 - NACC2 chr9 138942426 - Exonic hg19 Non-Cancer SPNT_276 2 CDS-5'UTR Inter-chr q34.3 Transcription factor 127406 ChimerSeq FusionScan Lung_normal ZNF273-ZNF429 ZNF273 chr7 64377496 + ZNF429 chr19 21712459 + Exonic hg19 Non-Cancer SPNT_293 2 5'UTR-CDS Inter-chr Transcription factor q11.21 Transcription factor 127407 ChimerSeq FusionScan Lung_normal DNAJC25-GNG10-UGCG DNAJC25-GNG10 chr9 114429226 + UGCG chr9 114676884 + Exonic hg19 Non-Cancer SPNT_293 2 Out-of-Frame Inter-chr q31.3 127408 ChimerSeq FusionScan Lung_normal CYP4B1-CYP4X1 CYP4B1 chr1 47280936 + CYP4X1 chr1 47495661 + Exonic hg19 Non-Cancer SPNT_012 2 Out-of-Frame Inter-chr p33 127409 ChimerSeq FusionScan Lung_normal EIF4E3-FOXP1 EIF4E3 chr3 71739160 - FOXP1 chr3 71542706 - Exonic hg19 Non-Cancer SPNT_091 2 CDS-5'UTR Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor 127410 ChimerSeq FusionScan Lung_normal IGF1R-PCNT IGF1R chr15 99251336 + PCNT chr21 47858076 + Exonic hg19 Non-Cancer SPNT_091 2 Out-of-Frame Inter-chr TK:InsR Oncogene q26.3 127411 ChimerSeq FusionScan Lung_normal DOCK4-ZNF277 DOCK4 chr7 111846156 - ZNF277 chr7 111926927 + Exonic hg19 Non-Cancer SPNT_091 2 In-Frame Inter-chr q31.1 Transcription factor 127412 ChimerSeq FusionScan Lung_normal SLC7A5-SMG1 SLC7A5 chr16 87902490 - SMG1 chr16 18900907 - Exonic hg19 Non-Cancer SPNT_091 2 Out-of-Frame Inter-chr q24.2 Atypical:PIKK 127413 ChimerSeq FusionScan Lung_normal PRH1-PRR4-ETV6 PRH1-PRR4 chr12 11324020 - ETV6 chr12 11905383 + Exonic hg19 Non-Cancer SPNT_235 2 Out-of-Frame Inter-chr 127414 ChimerSeq FusionScan Lung_normal TYW1B-TYW1 TYW1B chr7 72159676 - TYW1 chr7 66563527 + Exonic hg19 Non-Cancer SPNT_060 2 Out-of-Frame Inter-chr q11.23 127415 ChimerSeq FusionScan Lung_normal FAM21A-FAM21C FAM21A chr10 51829471 + FAM21C chr10 46224309 + Exonic hg19 Non-Cancer SPNT_060 2 In-Frame Inter-chr 127416 ChimerSeq FusionScan Lung_normal FAM18B1-FAM18B2-CDRT4 FAM18B1 chr17 18707579 + FAM18B2-CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer SPNT_060 2 CDS-3'UTR Inter-chr 127417 ChimerSeq FusionScan Lung_normal RGPD1-RGPD6 RGPD1 chr2 87203413 + RGPD6 chr2 111303208 - Exonic hg19 Non-Cancer SPNT_055 2 Out-of-Frame Inter-chr p11.2 127418 ChimerSeq FusionScan Lung_normal BTN3A3-BTN3A1 BTN3A3 chr6 26450361 + BTN3A1 chr6 26412639 + Exonic hg19 Non-Cancer SPNT_055 2 In-Frame Inter-chr p22.2 127419 ChimerSeq FusionScan Lung_normal BANP-CRYM-AS1 BANP chr16 88071617 + CRYM-AS1 chr16 21327204 + Exonic hg19 Non-Cancer SPNT_055 2 CDS-5'UTR Inter-chr Tumor suppressor gene q24.2 127420 ChimerSeq FusionScan Lung_normal RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer SPNT_100 3 Out-of-Frame Inter-chr q13.2 127421 ChimerSeq FusionScan Lung_normal NPHP3-ACAD11-NPHP3 NPHP3-ACAD11 chr3 132400757 - NPHP3 chr3 132411662 - Exonic hg19 Non-Cancer SPNT_100 2 Out-of-Frame Inter-chr q22.1 127422 ChimerSeq FusionScan Lung_normal ZNF788-ZNF763 ZNF788 chr19 12221246 + ZNF763 chr19 12088185 + Exonic hg19 Non-Cancer SPNT_100 2 5'UTR-CDS Inter-chr Transcription factor p13.2 Transcription factor 127423 ChimerSeq FusionScan Lung_normal RGPD1-RANBP2 RGPD1 chr2 87203413 + RANBP2 chr2 109369453 + Exonic hg19 Non-Cancer SPNT_100 2 In-Frame Inter-chr p11.2 127424 ChimerSeq FusionScan Lung_normal SMARCA4-SMARCA2 SMARCA4 chr19 11141569 + SMARCA2 chr9 2115821 + Exonic hg19 Non-Cancer SPNT_100 2 In-Frame Inter-chr Oncogene Tumor suppressor gene p13.2 Tumor suppressor gene 127425 ChimerSeq FusionScan Lung_normal POLR2J3-POLR2J2 POLR2J3 chr7 102180052 - POLR2J2 chr7 102279646 - Exonic hg19 Non-Cancer SPNT_041 2 3'UTR-3'UTR Inter-chr q22.1 127426 ChimerSeq FusionScan Lung_normal YWHAZ-ZNF706 YWHAZ chr8 101964156 - ZNF706 chr8 102213971 - Exonic hg19 Non-Cancer SPNT_061 2 5'UTR-5'UTR Inter-chr q22.3 Transcription factor 127427 ChimerSeq FusionScan Lung_normal ANKRD36B-ANKRD36 ANKRD36B chr2 98158373 - ANKRD36 chr2 97852934 + Exonic hg19 Non-Cancer SPNT_061 2 In-Frame Inter-chr q11.2 127428 ChimerSeq FusionScan Lung_normal LARP1-CNOT8 LARP1 chr5 154191200 + CNOT8 chr5 154244751 + Exonic hg19 Non-Cancer SPNT_061 2 In-Frame Inter-chr q33.2 127429 ChimerSeq FusionScan Lung_normal SLC7A5-SMG1 SLC7A5 chr16 87902490 - SMG1 chr16 18900907 - Exonic hg19 Non-Cancer SPNT_061 2 Out-of-Frame Inter-chr q24.2 Atypical:PIKK 127430 ChimerSeq FusionScan Lung_normal RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer SPNT_044 2 Out-of-Frame Inter-chr q13.2 127431 ChimerSeq FusionScan Lung_normal NFATC3-PLA2G15 NFATC3 chr16 68225678 + PLA2G15 chr16 68283192 + Exonic hg19 Non-Cancer SPNT_044 2 In-Frame Inter-chr Transcription factor q22.1 127432 ChimerSeq FusionScan Lung_normal YWHAZ-ZNF706 YWHAZ chr8 101964156 - ZNF706 chr8 102213971 - Exonic hg19 Non-Cancer SPNT_044 2 5'UTR-5'UTR Inter-chr q22.3 Transcription factor 127433 ChimerSeq FusionScan Lung_normal NFATC3-PLA2G15 NFATC3 chr16 68225678 + PLA2G15 chr16 68293048 + Exonic hg19 Non-Cancer SPNT_044 2 In-Frame Inter-chr Transcription factor q22.1 127434 ChimerSeq FusionScan Lung_normal DNAJC25-GNG10-UGCG DNAJC25-GNG10 chr9 114429226 + UGCG chr9 114676884 + Exonic hg19 Non-Cancer SPNT_044 2 Out-of-Frame Inter-chr q31.3 127435 ChimerSeq FusionScan Lung_normal FAM162B-ZUFSP FAM162B chr6 117083139 - ZUFSP chr6 116988370 - Exonic hg19 Non-Cancer SPNT_073 2 CDS-5'UTR Inter-chr q22.1 Transcription factor 127436 ChimerSeq FusionScan Lung_normal RGPD1-RGPD5 RGPD1 chr2 87203413 + RGPD5 chr2 110583452 + Exonic hg19 Non-Cancer SPNT_073 2 In-Frame Inter-chr p11.2 127437 ChimerSeq FusionScan Lung_normal CNRIP1-PPP3R1 CNRIP1 chr2 68544288 - PPP3R1 chr2 68444263 - Exonic hg19 Non-Cancer SPNT_115 4 In-Frame Inter-chr p14 127438 ChimerSeq FusionScan Lung_normal ATP6V0E1-CCDC72 ATP6V0E1 chr5 172410967 + CCDC72 chr3 48481812 + Exonic hg19 Non-Cancer SPNT_115 2 Out-of-Frame Inter-chr q35.1 127439 ChimerSeq FusionScan Lung_normal FKBP1A-SDCBP2 FKBP1A chr20 1352719 - SDCBP2 chr20 1301079 - Exonic hg19 Non-Cancer SPNT_115 2 CDS-5'UTR Inter-chr p13 127440 ChimerSeq FusionScan Lung_normal TPD52L2-DNAJC5 TPD52L2 chr20 62505169 + DNAJC5 chr20 62559687 + Exonic hg19 Non-Cancer SPNT_115 2 5'UTR-5'UTR Inter-chr q13.33 127441 ChimerSeq FusionScan Lung_normal TMCO3-TFDP1 TMCO3 chr13 114193822 + TFDP1 chr13 114265310 + Exonic hg19 Non-Cancer SPNT_115 2 Out-of-Frame Inter-chr q34 Transcription factor 127442 ChimerSeq FusionScan Lung_normal SLC7A5-SMG1 SLC7A5 chr16 87902490 - SMG1 chr16 18900907 - Exonic hg19 Non-Cancer SPNT_115 2 Out-of-Frame Inter-chr q24.2 Atypical:PIKK 127443 ChimerSeq FusionScan Lung_normal ARSG-PRKAR1A ARSG chr17 66397591 + PRKAR1A chr17 66511534 + Exonic hg19 Non-Cancer SPNT_115 2 CDS-5'UTR Inter-chr q24.2 Oncogene Tumor suppressor gene 127444 ChimerSeq FusionScan Lung_normal MAML1-SQSTM1 MAML1 chr5 179198244 + SQSTM1 chr5 179249957 + Exonic hg19 Non-Cancer SPNT_115 2 In-Frame Inter-chr 127445 ChimerSeq FusionScan Lung_normal ZNF410-PTGR2 ZNF410 chr14 74364965 + PTGR2 chr14 74346757 + Exonic hg19 Non-Cancer SPNT_095 2 In-Frame Inter-chr Transcription factor q24.3 127446 ChimerSeq FusionScan Lung_normal TYW1-TYW1B TYW1 chr7 66548526 + TYW1B chr7 72209578 - Exonic hg19 Non-Cancer SPNT_095 2 Out-of-Frame Inter-chr q11.21 127447 ChimerSeq FusionScan Lung_normal TYW1-TYW1B TYW1 chr7 66548526 + TYW1B chr7 72209578 - Exonic hg19 Non-Cancer SPNT_079 3 Out-of-Frame Inter-chr q11.21 127448 ChimerSeq FusionScan Lung_normal LRRC33-PIGX LRRC33 chr3 196381518 + PIGX chr3 196443728 + Exonic hg19 Non-Cancer SPNT_079 2 Out-of-Frame Inter-chr 127449 ChimerSeq FusionScan Lung_normal RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer SPNT_079 2 Out-of-Frame Inter-chr q13.2 127450 ChimerSeq FusionScan Lung_normal RGPD1-RANBP2 RGPD1 chr2 87203413 + RANBP2 chr2 109369453 + Exonic hg19 Non-Cancer SPNT_079 2 In-Frame Inter-chr p11.2 127451 ChimerSeq FusionScan Lung_normal FAM18B1-FAM18B2-CDRT4 FAM18B1 chr17 18707579 + FAM18B2-CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer SPNT_029 2 CDS-3'UTR Inter-chr 127452 ChimerSeq FusionScan Lung_normal BTN3A3-BTN3A1 BTN3A3 chr6 26450361 + BTN3A1 chr6 26412639 + Exonic hg19 Non-Cancer SPNT_029 2 In-Frame Inter-chr p22.2 127453 ChimerSeq FusionScan Lung_normal ITSN1-SON ITSN1 chr21 35154437 + SON chr21 34939462 + Exonic hg19 Non-Cancer SPNT_056 4 In-Frame Inter-chr q22.11 Transcription factor 127454 ChimerSeq FusionScan Lung_normal RGPD1-RANBP2 RGPD1 chr2 87203413 + RANBP2 chr2 109369453 + Exonic hg19 Non-Cancer SPNT_056 2 In-Frame Inter-chr p11.2 127455 ChimerSeq FusionScan Lung_normal TYW1B-TYW1 TYW1B chr7 72159676 - TYW1 chr7 66563527 + Exonic hg19 Non-Cancer SPNT_060 2 Out-of-Frame Inter-chr q11.23 127456 ChimerSeq FusionScan Lung_normal FAM21A-FAM21C FAM21A chr10 51829471 + FAM21C chr10 46224309 + Exonic hg19 Non-Cancer SPNT_060 2 In-Frame Inter-chr 127457 ChimerSeq FusionScan Lung_normal FAM18B1-FAM18B2-CDRT4 FAM18B1 chr17 18707579 + FAM18B2-CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer SPNT_060 2 CDS-3'UTR Inter-chr 127458 ChimerSeq FusionScan Lung_normal RGPD1-RGPD6 RGPD1 chr2 87203413 + RGPD6 chr2 111303208 - Exonic hg19 Non-Cancer SPNT_055 2 Out-of-Frame Inter-chr p11.2 127459 ChimerSeq FusionScan Lung_normal BTN3A3-BTN3A1 BTN3A3 chr6 26450361 + BTN3A1 chr6 26412639 + Exonic hg19 Non-Cancer SPNT_055 2 In-Frame Inter-chr p22.2 127460 ChimerSeq FusionScan Lung_normal BANP-CRYM-AS1 BANP chr16 88071617 + CRYM-AS1 chr16 21327204 + Exonic hg19 Non-Cancer SPNT_055 2 CDS-5'UTR Inter-chr Tumor suppressor gene q24.2 127461 ChimerSeq FusionScan Lung_normal RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer SPNT_100 3 Out-of-Frame Inter-chr q13.2 127462 ChimerSeq FusionScan Lung_normal NPHP3-ACAD11-NPHP3 NPHP3-ACAD11 chr3 132400757 - NPHP3 chr3 132411662 - Exonic hg19 Non-Cancer SPNT_100 2 Out-of-Frame Inter-chr q22.1 127463 ChimerSeq FusionScan Lung_normal ZNF788-ZNF763 ZNF788 chr19 12221246 + ZNF763 chr19 12088185 + Exonic hg19 Non-Cancer SPNT_100 2 5'UTR-CDS Inter-chr Transcription factor p13.2 Transcription factor 127464 ChimerSeq FusionScan Lung_normal RGPD1-RANBP2 RGPD1 chr2 87203413 + RANBP2 chr2 109369453 + Exonic hg19 Non-Cancer SPNT_100 2 In-Frame Inter-chr p11.2 127465 ChimerSeq FusionScan Lung_normal SMARCA4-SMARCA2 SMARCA4 chr19 11141569 + SMARCA2 chr9 2115821 + Exonic hg19 Non-Cancer SPNT_100 2 In-Frame Inter-chr Oncogene Tumor suppressor gene p13.2 Tumor suppressor gene 127466 ChimerSeq FusionScan Lung_normal POLR2J3-POLR2J2 POLR2J3 chr7 102180052 - POLR2J2 chr7 102279646 - Exonic hg19 Non-Cancer SPNT_041 2 3'UTR-3'UTR Inter-chr q22.1 127467 ChimerSeq FusionScan Lung_normal YWHAZ-ZNF706 YWHAZ chr8 101964156 - ZNF706 chr8 102213971 - Exonic hg19 Non-Cancer SPNT_061 2 5'UTR-5'UTR Inter-chr q22.3 Transcription factor 127468 ChimerSeq FusionScan Lung_normal ANKRD36B-ANKRD36 ANKRD36B chr2 98158373 - ANKRD36 chr2 97852934 + Exonic hg19 Non-Cancer SPNT_061 2 In-Frame Inter-chr q11.2 127469 ChimerSeq FusionScan Lung_normal LARP1-CNOT8 LARP1 chr5 154191200 + CNOT8 chr5 154244751 + Exonic hg19 Non-Cancer SPNT_061 2 In-Frame Inter-chr q33.2 127470 ChimerSeq FusionScan Lung_normal SLC7A5-SMG1 SLC7A5 chr16 87902490 - SMG1 chr16 18900907 - Exonic hg19 Non-Cancer SPNT_061 2 Out-of-Frame Inter-chr q24.2 Atypical:PIKK 127471 ChimerSeq FusionScan Lung_normal RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer SPNT_044 2 Out-of-Frame Inter-chr q13.2 127472 ChimerSeq FusionScan Lung_normal NFATC3-PLA2G15 NFATC3 chr16 68225678 + PLA2G15 chr16 68283192 + Exonic hg19 Non-Cancer SPNT_044 2 In-Frame Inter-chr Transcription factor q22.1 127473 ChimerSeq FusionScan Lung_normal YWHAZ-ZNF706 YWHAZ chr8 101964156 - ZNF706 chr8 102213971 - Exonic hg19 Non-Cancer SPNT_044 2 5'UTR-5'UTR Inter-chr q22.3 Transcription factor 127474 ChimerSeq FusionScan Lung_normal NFATC3-PLA2G15 NFATC3 chr16 68225678 + PLA2G15 chr16 68293048 + Exonic hg19 Non-Cancer SPNT_044 2 In-Frame Inter-chr Transcription factor q22.1 127475 ChimerSeq FusionScan Lung_normal DNAJC25-GNG10-UGCG DNAJC25-GNG10 chr9 114429226 + UGCG chr9 114676884 + Exonic hg19 Non-Cancer SPNT_044 2 Out-of-Frame Inter-chr q31.3 127476 ChimerSeq FusionScan Lung_normal FAM162B-ZUFSP FAM162B chr6 117083139 - ZUFSP chr6 116988370 - Exonic hg19 Non-Cancer SPNT_073 2 CDS-5'UTR Inter-chr q22.1 Transcription factor 127477 ChimerSeq FusionScan Lung_normal RGPD1-RGPD5 RGPD1 chr2 87203413 + RGPD5 chr2 110583452 + Exonic hg19 Non-Cancer SPNT_073 2 In-Frame Inter-chr p11.2 127478 ChimerSeq FusionScan Lung_normal CNRIP1-PPP3R1 CNRIP1 chr2 68544288 - PPP3R1 chr2 68444263 - Exonic hg19 Non-Cancer SPNT_115 4 In-Frame Inter-chr p14 127479 ChimerSeq FusionScan Lung_normal ATP6V0E1-CCDC72 ATP6V0E1 chr5 172410967 + CCDC72 chr3 48481812 + Exonic hg19 Non-Cancer SPNT_115 2 Out-of-Frame Inter-chr q35.1 127480 ChimerSeq FusionScan Lung_normal FKBP1A-SDCBP2 FKBP1A chr20 1352719 - SDCBP2 chr20 1301079 - Exonic hg19 Non-Cancer SPNT_115 2 CDS-5'UTR Inter-chr p13 127481 ChimerSeq FusionScan Lung_normal TPD52L2-DNAJC5 TPD52L2 chr20 62505169 + DNAJC5 chr20 62559687 + Exonic hg19 Non-Cancer SPNT_115 2 5'UTR-5'UTR Inter-chr q13.33 127482 ChimerSeq FusionScan Lung_normal TMCO3-TFDP1 TMCO3 chr13 114193822 + TFDP1 chr13 114265310 + Exonic hg19 Non-Cancer SPNT_115 2 Out-of-Frame Inter-chr q34 Transcription factor 127483 ChimerSeq FusionScan Lung_normal SLC7A5-SMG1 SLC7A5 chr16 87902490 - SMG1 chr16 18900907 - Exonic hg19 Non-Cancer SPNT_115 2 Out-of-Frame Inter-chr q24.2 Atypical:PIKK 127484 ChimerSeq FusionScan Lung_normal ARSG-PRKAR1A ARSG chr17 66397591 + PRKAR1A chr17 66511534 + Exonic hg19 Non-Cancer SPNT_115 2 CDS-5'UTR Inter-chr q24.2 Oncogene Tumor suppressor gene 127485 ChimerSeq FusionScan Lung_normal MAML1-SQSTM1 MAML1 chr5 179198244 + SQSTM1 chr5 179249957 + Exonic hg19 Non-Cancer SPNT_115 2 In-Frame Inter-chr 127486 ChimerSeq FusionScan Lung_normal ZNF410-PTGR2 ZNF410 chr14 74364965 + PTGR2 chr14 74346757 + Exonic hg19 Non-Cancer SPNT_095 2 In-Frame Inter-chr Transcription factor q24.3 127487 ChimerSeq FusionScan Lung_normal TYW1-TYW1B TYW1 chr7 66548526 + TYW1B chr7 72209578 - Exonic hg19 Non-Cancer SPNT_095 2 Out-of-Frame Inter-chr q11.21 127488 ChimerSeq FusionScan Lung_normal TYW1-TYW1B TYW1 chr7 66548526 + TYW1B chr7 72209578 - Exonic hg19 Non-Cancer SPNT_079 3 Out-of-Frame Inter-chr q11.21 127489 ChimerSeq FusionScan Lung_normal LRRC33-PIGX LRRC33 chr3 196381518 + PIGX chr3 196443728 + Exonic hg19 Non-Cancer SPNT_079 2 Out-of-Frame Inter-chr 127490 ChimerSeq FusionScan Lung_normal RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer SPNT_079 2 Out-of-Frame Inter-chr q13.2 127491 ChimerSeq FusionScan Lung_normal RGPD1-RANBP2 RGPD1 chr2 87203413 + RANBP2 chr2 109369453 + Exonic hg19 Non-Cancer SPNT_079 2 In-Frame Inter-chr p11.2 127492 ChimerSeq FusionScan Lung_normal FAM18B1-FAM18B2-CDRT4 FAM18B1 chr17 18707579 + FAM18B2-CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer SPNT_029 2 CDS-3'UTR Inter-chr 127493 ChimerSeq FusionScan Lung_normal BTN3A3-BTN3A1 BTN3A3 chr6 26450361 + BTN3A1 chr6 26412639 + Exonic hg19 Non-Cancer SPNT_029 2 In-Frame Inter-chr p22.2 127494 ChimerSeq FusionScan Lung_normal ITSN1-SON ITSN1 chr21 35154437 + SON chr21 34939462 + Exonic hg19 Non-Cancer SPNT_056 4 In-Frame Inter-chr q22.11 Transcription factor 127495 ChimerSeq FusionScan Lung_normal RGPD1-RANBP2 RGPD1 chr2 87203413 + RANBP2 chr2 109369453 + Exonic hg19 Non-Cancer SPNT_056 2 In-Frame Inter-chr p11.2 127496 ChimerSeq FusionScan Lung_normal TYW1B-TYW1 TYW1B chr7 72159676 - TYW1 chr7 66563527 + Exonic hg19 Non-Cancer SPNT_060 2 Out-of-Frame Inter-chr q11.23 127497 ChimerSeq FusionScan Lung_normal FAM21A-FAM21C FAM21A chr10 51829471 + FAM21C chr10 46224309 + Exonic hg19 Non-Cancer SPNT_060 2 In-Frame Inter-chr 127498 ChimerSeq FusionScan Lung_normal FAM18B1-FAM18B2-CDRT4 FAM18B1 chr17 18707579 + FAM18B2-CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer SPNT_060 2 CDS-3'UTR Inter-chr 127499 ChimerSeq FusionScan Lung_normal RGPD1-RGPD6 RGPD1 chr2 87203413 + RGPD6 chr2 111303208 - Exonic hg19 Non-Cancer SPNT_055 2 Out-of-Frame Inter-chr p11.2 127500 ChimerSeq FusionScan Lung_normal BTN3A3-BTN3A1 BTN3A3 chr6 26450361 + BTN3A1 chr6 26412639 + Exonic hg19 Non-Cancer SPNT_055 2 In-Frame Inter-chr p22.2 127501 ChimerSeq FusionScan Lung_normal BANP-CRYM-AS1 BANP chr16 88071617 + CRYM-AS1 chr16 21327204 + Exonic hg19 Non-Cancer SPNT_055 2 CDS-5'UTR Inter-chr Tumor suppressor gene q24.2 127502 ChimerSeq FusionScan Lung_normal RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer SPNT_100 3 Out-of-Frame Inter-chr q13.2 127503 ChimerSeq FusionScan Lung_normal NPHP3-ACAD11-NPHP3 NPHP3-ACAD11 chr3 132400757 - NPHP3 chr3 132411662 - Exonic hg19 Non-Cancer SPNT_100 2 Out-of-Frame Inter-chr q22.1 127504 ChimerSeq FusionScan Lung_normal ZNF788-ZNF763 ZNF788 chr19 12221246 + ZNF763 chr19 12088185 + Exonic hg19 Non-Cancer SPNT_100 2 5'UTR-CDS Inter-chr Transcription factor p13.2 Transcription factor 127505 ChimerSeq FusionScan Lung_normal RGPD1-RANBP2 RGPD1 chr2 87203413 + RANBP2 chr2 109369453 + Exonic hg19 Non-Cancer SPNT_100 2 In-Frame Inter-chr p11.2 127506 ChimerSeq FusionScan Lung_normal SMARCA4-SMARCA2 SMARCA4 chr19 11141569 + SMARCA2 chr9 2115821 + Exonic hg19 Non-Cancer SPNT_100 2 In-Frame Inter-chr Oncogene Tumor suppressor gene p13.2 Tumor suppressor gene 127507 ChimerSeq FusionScan Lung_normal POLR2J3-POLR2J2 POLR2J3 chr7 102180052 - POLR2J2 chr7 102279646 - Exonic hg19 Non-Cancer SPNT_041 2 3'UTR-3'UTR Inter-chr q22.1 127508 ChimerSeq FusionScan Lung_normal YWHAZ-ZNF706 YWHAZ chr8 101964156 - ZNF706 chr8 102213971 - Exonic hg19 Non-Cancer SPNT_061 2 5'UTR-5'UTR Inter-chr q22.3 Transcription factor 127509 ChimerSeq FusionScan Lung_normal ANKRD36B-ANKRD36 ANKRD36B chr2 98158373 - ANKRD36 chr2 97852934 + Exonic hg19 Non-Cancer SPNT_061 2 In-Frame Inter-chr q11.2 127510 ChimerSeq FusionScan Lung_normal LARP1-CNOT8 LARP1 chr5 154191200 + CNOT8 chr5 154244751 + Exonic hg19 Non-Cancer SPNT_061 2 In-Frame Inter-chr q33.2 127511 ChimerSeq FusionScan Lung_normal SLC7A5-SMG1 SLC7A5 chr16 87902490 - SMG1 chr16 18900907 - Exonic hg19 Non-Cancer SPNT_061 2 Out-of-Frame Inter-chr q24.2 Atypical:PIKK 127512 ChimerSeq FusionScan Lung_normal RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer SPNT_044 2 Out-of-Frame Inter-chr q13.2 127513 ChimerSeq FusionScan Lung_normal NFATC3-PLA2G15 NFATC3 chr16 68225678 + PLA2G15 chr16 68283192 + Exonic hg19 Non-Cancer SPNT_044 2 In-Frame Inter-chr Transcription factor q22.1 127514 ChimerSeq FusionScan Lung_normal YWHAZ-ZNF706 YWHAZ chr8 101964156 - ZNF706 chr8 102213971 - Exonic hg19 Non-Cancer SPNT_044 2 5'UTR-5'UTR Inter-chr q22.3 Transcription factor 127515 ChimerSeq FusionScan Lung_normal NFATC3-PLA2G15 NFATC3 chr16 68225678 + PLA2G15 chr16 68293048 + Exonic hg19 Non-Cancer SPNT_044 2 In-Frame Inter-chr Transcription factor q22.1 127516 ChimerSeq FusionScan Lung_normal DNAJC25-GNG10-UGCG DNAJC25-GNG10 chr9 114429226 + UGCG chr9 114676884 + Exonic hg19 Non-Cancer SPNT_044 2 Out-of-Frame Inter-chr q31.3 127517 ChimerSeq FusionScan Lung_normal FAM162B-ZUFSP FAM162B chr6 117083139 - ZUFSP chr6 116988370 - Exonic hg19 Non-Cancer SPNT_073 2 CDS-5'UTR Inter-chr q22.1 Transcription factor 127518 ChimerSeq FusionScan Lung_normal RGPD1-RGPD5 RGPD1 chr2 87203413 + RGPD5 chr2 110583452 + Exonic hg19 Non-Cancer SPNT_073 2 In-Frame Inter-chr p11.2 127519 ChimerSeq FusionScan Lung_normal CNRIP1-PPP3R1 CNRIP1 chr2 68544288 - PPP3R1 chr2 68444263 - Exonic hg19 Non-Cancer SPNT_115 4 In-Frame Inter-chr p14 127520 ChimerSeq FusionScan Lung_normal ATP6V0E1-CCDC72 ATP6V0E1 chr5 172410967 + CCDC72 chr3 48481812 + Exonic hg19 Non-Cancer SPNT_115 2 Out-of-Frame Inter-chr q35.1 127521 ChimerSeq FusionScan Lung_normal FKBP1A-SDCBP2 FKBP1A chr20 1352719 - SDCBP2 chr20 1301079 - Exonic hg19 Non-Cancer SPNT_115 2 CDS-5'UTR Inter-chr p13 127522 ChimerSeq FusionScan Lung_normal TPD52L2-DNAJC5 TPD52L2 chr20 62505169 + DNAJC5 chr20 62559687 + Exonic hg19 Non-Cancer SPNT_115 2 5'UTR-5'UTR Inter-chr q13.33 127523 ChimerSeq FusionScan Lung_normal TMCO3-TFDP1 TMCO3 chr13 114193822 + TFDP1 chr13 114265310 + Exonic hg19 Non-Cancer SPNT_115 2 Out-of-Frame Inter-chr q34 Transcription factor 127524 ChimerSeq FusionScan Lung_normal SLC7A5-SMG1 SLC7A5 chr16 87902490 - SMG1 chr16 18900907 - Exonic hg19 Non-Cancer SPNT_115 2 Out-of-Frame Inter-chr q24.2 Atypical:PIKK 127525 ChimerSeq FusionScan Lung_normal ARSG-PRKAR1A ARSG chr17 66397591 + PRKAR1A chr17 66511534 + Exonic hg19 Non-Cancer SPNT_115 2 CDS-5'UTR Inter-chr q24.2 Oncogene Tumor suppressor gene 127526 ChimerSeq FusionScan Lung_normal MAML1-SQSTM1 MAML1 chr5 179198244 + SQSTM1 chr5 179249957 + Exonic hg19 Non-Cancer SPNT_115 2 In-Frame Inter-chr 127527 ChimerSeq FusionScan Lung_normal ZNF410-PTGR2 ZNF410 chr14 74364965 + PTGR2 chr14 74346757 + Exonic hg19 Non-Cancer SPNT_095 2 In-Frame Inter-chr Transcription factor q24.3 127528 ChimerSeq FusionScan Lung_normal TYW1-TYW1B TYW1 chr7 66548526 + TYW1B chr7 72209578 - Exonic hg19 Non-Cancer SPNT_095 2 Out-of-Frame Inter-chr q11.21 127529 ChimerSeq FusionScan Lung_normal TYW1-TYW1B TYW1 chr7 66548526 + TYW1B chr7 72209578 - Exonic hg19 Non-Cancer SPNT_079 3 Out-of-Frame Inter-chr q11.21 127530 ChimerSeq FusionScan Lung_normal LRRC33-PIGX LRRC33 chr3 196381518 + PIGX chr3 196443728 + Exonic hg19 Non-Cancer SPNT_079 2 Out-of-Frame Inter-chr 127531 ChimerSeq FusionScan Lung_normal RABAC1-SCIMP RABAC1 chr19 42462887 - SCIMP chr17 5124645 - Exonic hg19 Non-Cancer SPNT_079 2 Out-of-Frame Inter-chr q13.2 127532 ChimerSeq FusionScan Lung_normal RGPD1-RANBP2 RGPD1 chr2 87203413 + RANBP2 chr2 109369453 + Exonic hg19 Non-Cancer SPNT_079 2 In-Frame Inter-chr p11.2 127533 ChimerSeq FusionScan Lung_normal FAM18B1-FAM18B2-CDRT4 FAM18B1 chr17 18707579 + FAM18B2-CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer SPNT_029 2 CDS-3'UTR Inter-chr 127534 ChimerSeq FusionScan Lung_normal BTN3A3-BTN3A1 BTN3A3 chr6 26450361 + BTN3A1 chr6 26412639 + Exonic hg19 Non-Cancer SPNT_029 2 In-Frame Inter-chr p22.2 127535 ChimerSeq FusionScan Lung_normal ITSN1-SON ITSN1 chr21 35154437 + SON chr21 34939462 + Exonic hg19 Non-Cancer SPNT_056 4 In-Frame Inter-chr q22.11 Transcription factor 127536 ChimerSeq FusionScan Lung_normal RGPD1-RANBP2 RGPD1 chr2 87203413 + RANBP2 chr2 109369453 + Exonic hg19 Non-Cancer SPNT_056 2 In-Frame Inter-chr p11.2 127537 ChimerSeq STARFusion TCGA RNA-Seq EGFR-FLNA EGFR chr7 55242532 + FLNA chrX 153577387 - Exonic hg19 Non-Cancer TCGA-BT-A20Q-11A 4 2 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q28 Tumor suppressor gene 127538 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-BT-A20Q-11A 2 1 3'UTR-5'UTR Intra-chr q12.1 127539 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230311 - PZP chr12 9311065 - Exonic hg19 Non-Cancer TCGA-BT-A20R-11A 4 8 Out-of-frame Intra-chr p13.31 p13.31 127540 ChimerSeq STARFusion TCGA RNA-Seq TPM2-ACTG1 TPM2 chr9 35685061 - ACTG1 chr17 79478652 - Exonic hg19 Non-Cancer TCGA-BT-A20R-11A 3 12 In-Frame Inter-chr p13.3 q25.3 127541 ChimerSeq STARFusion TCGA RNA-Seq EGFR-ACTG2 EGFR chr7 55242541 + ACTG2 chr2 74129531 + Exonic hg19 Non-Cancer TCGA-BT-A20R-11A 5 1 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene p13.1 127542 ChimerSeq STARFusion TCGA RNA-Seq DSTN-PRMT2 DSTN chr20 17585257 + PRMT2 chr21 48073583 + Exonic hg19 Non-Cancer TCGA-BT-A20R-11A 3 0 Out-of-frame Inter-chr p12.1 q22.3 127543 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-BL-A13J-11A 2 3 CDS-5'UTR Intra-chr p23.2 127544 ChimerSeq STARFusion TCGA RNA-Seq LOC729852-GLCCI1 LOC729852 chr7 7841374 + GLCCI1 chr7 8043538 + Exonic hg19 Non-Cancer TCGA-BL-A13J-11A 2 1 5'UTR-CDS Intra-chr p21.3 127545 ChimerSeq STARFusion TCGA RNA-Seq TFG-GPR128 TFG chr3 100438902 + GPR128 chr3 100348442 + Exonic hg19 Non-Cancer TCGA-GD-A3OP-11A 10 45 In-Frame Intra-chr q12.2 127546 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-GD-A3OP-11A 4 6 CDS-5'UTR Intra-chr q21.31 127547 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-GD-A3OP-11A 4 5 3'UTR-3'UTR Intra-chr 127548 ChimerSeq STARFusion TCGA RNA-Seq IGSF5-PCP4 IGSF5 chr21 41165540 + PCP4 chr21 41270401 + Exonic hg19 Non-Cancer TCGA-GD-A3OP-11A 3 4 In-Frame Intra-chr q22.2 q22.2 127549 ChimerSeq STARFusion TCGA RNA-Seq REV1-WWC3 REV1 chr2 100106279 - WWC3 chrX 10058811 + Exonic hg19 Non-Cancer TCGA-GC-A3WC-11A 2 1 Out-of-frame Inter-chr q11.2 p22.2 127550 ChimerSeq STARFusion TCGA RNA-Seq LOC728323-FBXO25 LOC728323 chr2 243037178 + FBXO25 chr8 399990 + Exonic hg19 Non-Cancer TCGA-GD-A2C5-11A 2 12 5'UTR-CDS Inter-chr p23.3 Tumor suppressor gene 127551 ChimerSeq STARFusion TCGA RNA-Seq ACAP2-TP63 ACAP2 chr3 195065988 - TP63 chr3 189455529 + Exonic hg19 Non-Cancer TCGA-GD-A2C5-11A 2 6 Out-of-frame Intra-chr q29 q28 Tumor suppressor gene Transcription factor 127552 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005213 - POLA1 chrX 24721386 + Exonic hg19 Non-Cancer TCGA-BT-A2LA-11A 12 0 Out-of-frame Inter-chr q11.2 p22.11 127553 ChimerSeq STARFusion TCGA RNA-Seq SUGT1P3-MRPS31 SUGT1P3 chr13 41495755 - MRPS31 chr13 41333242 - Exonic hg19 Non-Cancer TCGA-BT-A2LA-11A 3 28 3'UTR-CDS Intra-chr q14.11 q14.11 127554 ChimerSeq STARFusion TCGA RNA-Seq TPTE2P5-MRPS31 TPTE2P5 chr13 41495755 - MRPS31 chr13 41333242 - Exonic hg19 Non-Cancer TCGA-BT-A2LA-11A 3 28 Out-of-frame Intra-chr q14.11 q14.11 127555 ChimerSeq STARFusion TCGA RNA-Seq SUGT1P3-MRPS31 SUGT1P3 chr13 41495755 - MRPS31 chr13 41341169 - Exonic hg19 Non-Cancer TCGA-BT-A2LA-11A 2 28 3'UTR-CDS Intra-chr q14.11 q14.11 127556 ChimerSeq STARFusion TCGA RNA-Seq TPTE2P5-MRPS31 TPTE2P5 chr13 41495755 - MRPS31 chr13 41341169 - Exonic hg19 Non-Cancer TCGA-BT-A2LA-11A 2 28 Out-of-frame Intra-chr q14.11 q14.11 127557 ChimerSeq STARFusion TCGA RNA-Seq TTTY14-NCRNA00185 TTTY14 chrY 21238931 - NCRNA00185 chrY 21039091 - Exonic hg19 Non-Cancer TCGA-BT-A2LA-11A 6 11 Out-of-frame Intra-chr q11.222 127558 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BT-A2LA-11A 3 5 Out-of-frame Inter-chr q13.13 p12.3 127559 ChimerSeq STARFusion TCGA RNA-Seq TPM2-ACTG1 TPM2 chr9 35685061 - ACTG1 chr17 79478652 - Exonic hg19 Non-Cancer TCGA-CU-A0YN-11A 4 5 In-Frame Inter-chr p13.3 q25.3 127560 ChimerSeq STARFusion TCGA RNA-Seq ENO1-EDARADD ENO1 chr1 8926346 - EDARADD chr1 236647061 + Exonic hg19 Non-Cancer TCGA-CU-A0YN-11A 3 5 Out-of-frame Intra-chr p36.23 q42.3 127561 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-CU-A0YN-11A 2 1 3'UTR-5'UTR Intra-chr q12.1 127562 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 Non-Cancer TCGA-GC-A6I3-11A 13 270 Out-of-frame Intra-chr q11.22 127563 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-GD-A3OQ-11A 4 4 CDS-5'UTR Intra-chr q21.31 127564 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-GD-A3OQ-11A 4 1 3'UTR-3'UTR Intra-chr 127565 ChimerSeq STARFusion TCGA RNA-Seq LOC154761-FAM115A LOC154761 chr7 143533733 - FAM115A chr7 143560889 - Exonic hg19 Non-Cancer TCGA-GD-A3OQ-11A 2 0 3'UTR-CDS Intra-chr 127566 ChimerSeq STARFusion TCGA RNA-Seq MTMR8-ASB12 MTMR8 chrX 63548652 - ASB12 chrX 63445554 - Exonic hg19 Non-Cancer TCGA-GD-A3OQ-11A 2 0 CDS-5'UTR Intra-chr q11.2 q11.2 127567 ChimerSeq STARFusion TCGA RNA-Seq SPOP-SNRPA1 SPOP chr17 47753257 - SNRPA1 chr15 101827907 - Exonic hg19 Non-Cancer TCGA-GD-A3OQ-11A 2 0 5'UTR-CDS Inter-chr q21.33 Oncogene Tumor suppressor gene q26.3 127568 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-GC-A3BM-11A 2 4 3'UTR-CDS Intra-chr p15.4 127569 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-GC-A3BM-11A 2 3 CDS-5'UTR Intra-chr q21.31 127570 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-GC-A3BM-11A 2 3 3'UTR-3'UTR Intra-chr 127571 ChimerSeq STARFusion TCGA RNA-Seq DOPEY2-RAB25 DOPEY2 chr21 37626207 + RAB25 chr1 156039462 + Exonic hg19 Non-Cancer TCGA-BT-A20W-11A 10 28 Out-of-frame Inter-chr q22.12 q22 Tumor suppressor gene 127572 ChimerSeq STARFusion TCGA RNA-Seq ANXA9-MRPL9 ANXA9 chr1 150959137 + MRPL9 chr1 151732657 - Exonic hg19 Non-Cancer TCGA-BT-A20W-11A 5 19 In-Frame Intra-chr q21.3 q21.3 127573 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230305 - PZP chr12 9311059 - Exonic hg19 Non-Cancer TCGA-BT-A20W-11A 4 16 Out-of-frame Intra-chr p13.31 p13.31 127574 ChimerSeq STARFusion TCGA RNA-Seq PAK4-EIF3K PAK4 chr19 39616559 + EIF3K chr19 39110977 + Exonic hg19 Non-Cancer TCGA-BT-A20W-11A 2 11 5'UTR-CDS Intra-chr q13.2 STE:STE20 127575 ChimerSeq STARFusion TCGA RNA-Seq LMNA-FCGR3A LMNA chr1 156052975 + FCGR3A chr1 161514748 - Exonic hg19 Non-Cancer TCGA-BT-A20W-11A 2 10 5'UTR-CDS Intra-chr q22 q23.3 127576 ChimerSeq STARFusion TCGA RNA-Seq SP2-NPEPPS SP2 chr17 45994496 + NPEPPS chr17 45682699 + Exonic hg19 Non-Cancer TCGA-BT-A20W-11A 2 1 In-Frame Intra-chr q21.32 Transcription factor q21.32 127577 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BT-A20U-11A 3 8 Out-of-frame Inter-chr q13.13 p12.3 127578 ChimerSeq STARFusion TCGA RNA-Seq EGFR-KRT13 EGFR chr7 55242533 + KRT13 chr17 39661558 - Exonic hg19 Non-Cancer TCGA-BT-A20U-11A 3 6 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 127579 ChimerSeq STARFusion TCGA RNA-Seq EGFR-KRT13 EGFR chr7 55242533 + KRT13 chr17 39661558 - Exonic hg19 Non-Cancer TCGA-BT-A2LB-11A 16 24 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene q21.2 127580 ChimerSeq STARFusion TCGA RNA-Seq PRKCH-FLJ22447 PRKCH chr14 61997313 + FLJ22447 chr14 62117680 + Exonic hg19 Non-Cancer TCGA-BT-A2LB-11A 2 4 CDS-5'UTR Intra-chr q23.1 q23.1 127581 ChimerSeq STARFusion TCGA RNA-Seq ENO1-EDARADD ENO1 chr1 8926352 - EDARADD chr1 236647055 + Exonic hg19 Non-Cancer TCGA-K4-A5RI-11A 3 6 Out-of-frame Intra-chr p36.23 q42.3 127582 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-E9-A1R7-11A 6 27 Out-of-frame Intra-chr q11.22 q11.23 127583 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-E9-A1R7-11A 10 0 Out-of-frame Inter-chr q21 q13.42 127584 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-E9-A1R7-11A 6 12 Out-of-frame Intra-chr q11.22 q11.22 127585 ChimerSeq STARFusion TCGA RNA-Seq COL8A1-CMSS1 COL8A1 chr3 99513226 + CMSS1 chr3 99865817 + Exonic hg19 Non-Cancer TCGA-E9-A1R7-11A 4 6 Out-of-frame Intra-chr q12.1 q12.1 127586 ChimerSeq STARFusion TCGA RNA-Seq PLIN4-C3 PLIN4 chr19 4511682 - C3 chr19 6685044 - Exonic hg19 Non-Cancer TCGA-E9-A1R7-11A 3 5 Out-of-frame Intra-chr p13.3 p13.3 127587 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-E9-A1RD-11A 9 35 Out-of-frame Intra-chr q11.22 q11.23 127588 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-E9-A1RD-11A 9 19 Out-of-frame Intra-chr q11.22 q11.22 127589 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-E9-A1RD-11A 8 19 3'UTR-3'UTR Intra-chr 127590 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-E9-A1RD-11A 10 0 Out-of-frame Inter-chr q21 q13.42 127591 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-E9-A1RD-11A 8 6 Out-of-frame Inter-chr q13.13 p12.3 127592 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-E9-A1RD-11A 4 14 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 127593 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A0AY-11A 6 1 CDS-5'UTR Intra-chr q21.31 127594 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A0AY-11A 6 0 3'UTR-3'UTR Intra-chr 127595 ChimerSeq STARFusion TCGA RNA-Seq NFATC1-CLN8 NFATC1 chr18 77246937 + CLN8 chr8 1728416 + Exonic hg19 Non-Cancer TCGA-BH-A0AY-11A 2 1 Out-of-frame Inter-chr q23 Transcription factor p23.3 127596 ChimerSeq STARFusion TCGA RNA-Seq EML4-EPCAM EML4 chr2 42530586 + EPCAM chr2 47602373 + Exonic hg19 Non-Cancer TCGA-BH-A0AY-11A 2 0 Out-of-frame Intra-chr p21 Oncogene p21 127597 ChimerSeq STARFusion TCGA RNA-Seq TFG-GPR128 TFG chr3 100438902 + GPR128 chr3 100348442 + Exonic hg19 Non-Cancer TCGA-E2-A1L7-11A 25 86 In-Frame Intra-chr q12.2 127598 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-E2-A1L7-11A 6 6 3'UTR-CDS Intra-chr p15.4 127599 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-E2-A1L7-11A 3 0 Out-of-frame Inter-chr q21 q13.42 127600 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-E2-A1L7-11A 2 2 CDS-5'UTR Intra-chr p23.2 127601 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-AC-A23H-11A 8 25 Out-of-frame Intra-chr q11.22 q11.23 127602 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-AC-A23H-11A 13 0 Out-of-frame Inter-chr q21 q13.42 127603 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-AC-A23H-11A 8 12 Out-of-frame Intra-chr q11.22 q11.22 127604 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-AC-A23H-11A 5 10 Out-of-frame Inter-chr q13.13 p12.3 127605 ChimerSeq STARFusion TCGA RNA-Seq C7orf50-SPRY1 C7orf50 chr7 1166893 - SPRY1 chr4 124322692 + Exonic hg19 Non-Cancer TCGA-BH-A0BC-11A 2 1 Out-of-frame Inter-chr p22.3 q28.1 127606 ChimerSeq STARFusion TCGA RNA-Seq NHLRC3-VDAC3 NHLRC3 chr13 39613848 + VDAC3 chr8 42262889 + Exonic hg19 Non-Cancer TCGA-BH-A0BC-11A 2 1 In-Frame Inter-chr q13.3 p11.21 127607 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-BH-A1FD-11B 19 0 Out-of-frame Inter-chr q21 q13.42 127608 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A1FD-11B 10 27 Out-of-frame Intra-chr q11.22 q11.23 127609 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A1FD-11B 9 9 Out-of-frame Intra-chr q11.22 q11.22 127610 ChimerSeq STARFusion TCGA RNA-Seq NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer TCGA-BH-A1FD-11B 9 0 Out-of-frame Intra-chr p11.2 127611 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-BH-A1FD-11B 2 22 5'UTR-CDS Intra-chr q13.1 q13.1 127612 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A18L-11A 5 32 Out-of-frame Intra-chr q11.22 q11.23 127613 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A18L-11A 5 13 Out-of-frame Intra-chr q11.22 q11.22 127614 ChimerSeq STARFusion TCGA RNA-Seq MARVELD1-MEGF8 MARVELD1 chr10 99477355 + MEGF8 chr19 42854299 + Exonic hg19 Non-Cancer TCGA-AC-A2FF-11A 12 0 3'UTR-CDS Inter-chr q24.2 Tumor suppressor gene q13.2 127615 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-AC-A2FF-11A 7 6 CDS-5'UTR Intra-chr q21.31 127616 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-AC-A2FF-11A 7 5 3'UTR-3'UTR Intra-chr 127617 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-AC-A2FF-11A 5 8 Out-of-frame Inter-chr q13.13 p12.3 127618 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-AC-A2FF-11A 2 4 CDS-5'UTR Intra-chr p23.2 127619 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A1FJ-11B 16 49 Out-of-frame Intra-chr q11.22 q11.23 127620 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A1FJ-11B 16 26 Out-of-frame Intra-chr q11.22 q11.22 127621 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A1FJ-11B 4 8 Out-of-frame Inter-chr q13.13 p12.3 127622 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-BH-A1FJ-11B 3 11 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 127623 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-BH-A1FJ-11B 2 10 5'UTR-CDS Intra-chr q13.1 q13.1 127624 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-E9-A1ND-11A 4 4 Out-of-frame Inter-chr q13.13 p12.3 127625 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-E9-A1ND-11A 3 4 Out-of-frame Inter-chr q13.13 p12.3 127626 ChimerSeq STARFusion TCGA RNA-Seq MNAT1-SLC38A6 MNAT1 chr14 61346553 + SLC38A6 chr14 61449226 + Exonic hg19 Non-Cancer TCGA-E9-A1ND-11A 2 0 Out-of-frame Intra-chr q23.1 q23.1 127627 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-E9-A1RF-11A 4 8 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 127628 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005213 - POLA1 chrX 24721386 + Exonic hg19 Non-Cancer TCGA-E9-A1RF-11A 3 0 Out-of-frame Inter-chr q11.2 p22.11 127629 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44648235 - Exonic hg19 Non-Cancer TCGA-E9-A1RF-11A 2 2 CDS-5'UTR Intra-chr q21.31 127630 ChimerSeq STARFusion TCGA RNA-Seq SOCS5-LOC100134259 SOCS5 chr2 46926588 + LOC100134259 chr2 47083062 + Exonic hg19 Non-Cancer TCGA-E9-A1RF-11A 2 2 5'UTR-5'UTR Intra-chr p21 127631 ChimerSeq STARFusion TCGA RNA-Seq SLC25A51-EXOSC3 SLC25A51 chr9 37899826 - EXOSC3 chr9 37784060 - Exonic hg19 Non-Cancer TCGA-E9-A1RF-11A 2 1 5'UTR-CDS Intra-chr p13.1 p13.2 127632 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A18V-11A 10 4 Out-of-frame Inter-chr q13.13 p12.3 127633 ChimerSeq STARFusion TCGA RNA-Seq ITPKC-LTBP4 ITPKC chr19 41231344 + LTBP4 chr19 41110941 + Exonic hg19 Non-Cancer TCGA-BH-A18V-11A 2 10 Out-of-frame Intra-chr q13.2 q13.2 127634 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-BH-A1EN-11A 20 0 Out-of-frame Inter-chr q21 q13.42 127635 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A1EN-11A 7 32 Out-of-frame Intra-chr q11.22 q11.23 127636 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A1EN-11A 7 19 Out-of-frame Intra-chr q11.22 q11.22 127637 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A1EN-11A 8 8 Out-of-frame Inter-chr q13.13 p12.3 127638 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A1EN-11A 3 7 Out-of-frame Inter-chr q13.13 p12.3 127639 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-E9-A1RI-11A 9 9 Out-of-frame Inter-chr q13.13 p12.3 127640 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-E9-A1RI-11A 6 9 Out-of-frame Inter-chr q13.13 p12.3 127641 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-E9-A1RI-11A 5 6 3'UTR-5'UTR Intra-chr q12.1 127642 ChimerSeq STARFusion TCGA RNA-Seq COL8A1-CMSS1 COL8A1 chr3 99513226 + CMSS1 chr3 99865817 + Exonic hg19 Non-Cancer TCGA-E9-A1RI-11A 4 5 Out-of-frame Intra-chr q12.1 q12.1 127643 ChimerSeq STARFusion TCGA RNA-Seq SAV1-GYPE SAV1 chr14 51131897 - GYPE chr4 144801662 - Exonic hg19 Non-Cancer TCGA-E9-A1RI-11A 5 0 In-Frame Inter-chr q22.1 q31.21 127644 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-E9-A1RI-11A 2 7 CDS-5'UTR Intra-chr p23.2 127645 ChimerSeq STARFusion TCGA RNA-Seq SLC25A51-EXOSC3 SLC25A51 chr9 37899826 - EXOSC3 chr9 37784060 - Exonic hg19 Non-Cancer TCGA-E9-A1RI-11A 2 2 5'UTR-CDS Intra-chr p13.1 p13.2 127646 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A1FU-11A 4 12 3'UTR-CDS Intra-chr p15.4 127647 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230305 - PZP chr12 9311059 - Exonic hg19 Non-Cancer TCGA-BH-A1FU-11A 3 1 Out-of-frame Intra-chr p13.31 p13.31 127648 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-BH-A1FU-11A 2 5 CDS-5'UTR Intra-chr p23.2 127649 ChimerSeq STARFusion TCGA RNA-Seq MTMR8-ASB12 MTMR8 chrX 63548652 - ASB12 chrX 63445554 - Exonic hg19 Non-Cancer TCGA-BH-A1FU-11A 3 1 CDS-5'UTR Intra-chr q11.2 q11.2 127650 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A1FH-11B 8 31 Out-of-frame Intra-chr q11.22 q11.23 127651 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A1FH-11B 8 17 Out-of-frame Intra-chr q11.22 q11.22 127652 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A1FH-11B 2 11 3'UTR-3'UTR Intra-chr 127653 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A1FH-11B 3 3 Out-of-frame Inter-chr q13.13 p12.3 127654 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A18K-11A 8 21 3'UTR-CDS Intra-chr p15.4 127655 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-BH-A18K-11A 3 16 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 127656 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-BH-A18K-11A 2 13 5'UTR-CDS Intra-chr q13.1 q13.1 127657 ChimerSeq STARFusion TCGA RNA-Seq SOCS5-LOC100134259 SOCS5 chr2 46926588 + LOC100134259 chr2 47083062 + Exonic hg19 Non-Cancer TCGA-BH-A18K-11A 2 1 5'UTR-5'UTR Intra-chr p21 127658 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A1F0-11B 8 5 Out-of-frame Inter-chr q13.13 p12.3 127659 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A1F0-11B 5 5 Out-of-frame Inter-chr q13.13 p12.3 127660 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-BH-A1F0-11B 2 6 5'UTR-CDS Intra-chr q13.1 q13.1 127661 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A1F0-11B 3 2 CDS-5'UTR Intra-chr q21.31 127662 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A1F0-11B 3 2 3'UTR-3'UTR Intra-chr 127663 ChimerSeq STARFusion TCGA RNA-Seq LOC729852-GLCCI1 LOC729852 chr7 7841374 + GLCCI1 chr7 8043538 + Exonic hg19 Non-Cancer TCGA-BH-A1F0-11B 2 6 5'UTR-CDS Intra-chr p21.3 127664 ChimerSeq STARFusion TCGA RNA-Seq SOCS5-LOC100134259 SOCS5 chr2 46926588 + LOC100134259 chr2 47083062 + Exonic hg19 Non-Cancer TCGA-BH-A1F0-11B 3 2 5'UTR-5'UTR Intra-chr p21 127665 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-BH-A1F0-11B 3 0 Out-of-frame Inter-chr q11.2 p22.11 127666 ChimerSeq STARFusion TCGA RNA-Seq YEATS4-GRIP1 YEATS4 chr12 69764755 + GRIP1 chr12 66859202 - Exonic hg19 Non-Cancer TCGA-BH-A1EW-11B 39 72 In-Frame Intra-chr q15 q14.3 127667 ChimerSeq STARFusion TCGA RNA-Seq ITFG1-ZFC3H1 ITFG1 chr16 47252779 - ZFC3H1 chr12 72041593 - Exonic hg19 Non-Cancer TCGA-BH-A1EW-11B 21 75 In-Frame Inter-chr q12.1 q21.1 127668 ChimerSeq STARFusion TCGA RNA-Seq CPSF6-LYZ CPSF6 chr12 69633486 + LYZ chr12 69743888 + Exonic hg19 Non-Cancer TCGA-BH-A1EW-11B 5 20 Out-of-frame Intra-chr q15 q15 127669 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A1EW-11B 7 8 Out-of-frame Inter-chr q13.13 p12.3 127670 ChimerSeq STARFusion TCGA RNA-Seq ARHGEF26-NLGN1 ARHGEF26 chr3 153870721 + NLGN1 chr3 173993105 + Exonic hg19 Non-Cancer TCGA-BH-A1EW-11B 6 5 Out-of-frame Intra-chr q26.31 127671 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A1EW-11B 5 8 Out-of-frame Inter-chr q13.13 p12.3 127672 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-BH-A1EW-11B 2 19 5'UTR-CDS Intra-chr q13.1 q13.1 127673 ChimerSeq STARFusion TCGA RNA-Seq LOC728606-KCTD1 LOC728606 chr18 24283356 - KCTD1 chr18 24081214 - Exonic hg19 Non-Cancer TCGA-BH-A1EW-11B 2 19 3'UTR-CDS Intra-chr q11.2 127674 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-BH-A1EW-11B 5 3 CDS-3'UTR Intra-chr q11.22 q22.2 127675 ChimerSeq STARFusion TCGA RNA-Seq PTPN12-TEKT3 PTPN12 chr7 77166962 + TEKT3 chr17 15234931 - Exonic hg19 Non-Cancer TCGA-BH-A1EW-11B 4 6 CDS-5'UTR Inter-chr q11.23 Tumor suppressor gene p12 127676 ChimerSeq STARFusion TCGA RNA-Seq PTPN12-TEKT3 PTPN12 chr7 77166962 + TEKT3 chr17 15243378 - Exonic hg19 Non-Cancer TCGA-BH-A1EW-11B 4 6 CDS-5'UTR Inter-chr q11.23 Tumor suppressor gene p12 127677 ChimerSeq STARFusion TCGA RNA-Seq PFKFB3-LOC399715 PFKFB3 chr10 6268328 + LOC399715 chr10 6368509 + Exonic hg19 Non-Cancer TCGA-BH-A1EW-11B 2 6 CDS-5'UTR Intra-chr p15.1 127678 ChimerSeq STARFusion TCGA RNA-Seq DSTN-PRMT2 DSTN chr20 17585257 + PRMT2 chr21 48073583 + Exonic hg19 Non-Cancer TCGA-BH-A1EW-11B 3 0 Out-of-frame Inter-chr p12.1 q22.3 127679 ChimerSeq STARFusion TCGA RNA-Seq SMARCA4-ELAVL3 SMARCA4 chr19 11118699 + ELAVL3 chr19 11569426 - Exonic hg19 Non-Cancer TCGA-BH-A1EW-11B 2 3 Out-of-frame Intra-chr p13.2 Oncogene Tumor suppressor gene p13.2 127680 ChimerSeq STARFusion TCGA RNA-Seq FGFR1OP-CCR6 FGFR1OP chr6 167447459 + CCR6 chr6 167549526 + Exonic hg19 Non-Cancer TCGA-BH-A1EW-11B 2 2 CDS-5'UTR Intra-chr q27 q27 127681 ChimerSeq STARFusion TCGA RNA-Seq MTMR8-ASB12 MTMR8 chrX 63548652 - ASB12 chrX 63445554 - Exonic hg19 Non-Cancer TCGA-BH-A1EW-11B 2 2 CDS-5'UTR Intra-chr q11.2 q11.2 127682 ChimerSeq STARFusion TCGA RNA-Seq HOXC10-FLJ12825 HOXC10 chr12 54379794 + FLJ12825 chr12 54512388 + Exonic hg19 Non-Cancer TCGA-BH-A1EW-11B 2 1 CDS-5'UTR Intra-chr q13.13 Transcription factor q13.13 127683 ChimerSeq STARFusion TCGA RNA-Seq NDUFV3-PKNOX1 NDUFV3 chr21 44317157 + PKNOX1 chr21 44424436 + Exonic hg19 Non-Cancer TCGA-BH-A1EW-11B 2 1 CDS-5'UTR Intra-chr q22.3 q22.3 Tumor suppressor gene Transcription factor 127684 ChimerSeq STARFusion TCGA RNA-Seq ACACA-C17orf75 ACACA chr17 35766352 - C17orf75 chr17 30665370 - Exonic hg19 Non-Cancer TCGA-BH-A1EW-11B 2 0 In-Frame Intra-chr q11.2 127685 ChimerSeq STARFusion TCGA RNA-Seq ATXN2-FBXW2 ATXN2 chr12 111990084 - FBXW2 chr9 123540823 - Exonic hg19 Non-Cancer TCGA-BH-A1EW-11B 2 0 In-Frame Inter-chr q24.12 q33.2 127686 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-E9-A1NA-11A 2 4 3'UTR-CDS Intra-chr p15.4 127687 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-E9-A1NA-11A 2 4 CDS-5'UTR Intra-chr p23.2 127688 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-E9-A1NA-11A 2 0 CDS-5'UTR Intra-chr q21.31 127689 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-E9-A1NA-11A 2 0 3'UTR-3'UTR Intra-chr 127690 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-A7-A13E-11A 2 18 5'UTR-CDS Intra-chr q13.1 q13.1 127691 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-A7-A13E-11A 3 4 3'UTR-5'UTR Intra-chr q12.1 127692 ChimerSeq STARFusion TCGA RNA-Seq MARVELD1-MEGF8 MARVELD1 chr10 99477355 + MEGF8 chr19 42854299 + Exonic hg19 Non-Cancer TCGA-A7-A13E-11A 3 0 3'UTR-CDS Inter-chr q24.2 Tumor suppressor gene q13.2 127693 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 Non-Cancer TCGA-BH-A0C3-11A 20 402 Out-of-frame Intra-chr q11.22 127694 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A0C3-11A 6 11 3'UTR-CDS Intra-chr p15.4 127695 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A0C3-11A 4 4 Out-of-frame Inter-chr q13.13 p12.3 127696 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-BH-A0C3-11A 4 3 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 127697 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A0C3-11A 3 2 CDS-5'UTR Intra-chr q21.31 127698 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A0C3-11A 3 2 3'UTR-3'UTR Intra-chr 127699 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-BH-A0C3-11A 2 4 CDS-5'UTR Intra-chr p23.2 127700 ChimerSeq STARFusion TCGA RNA-Seq LOC729852-GLCCI1 LOC729852 chr7 7841374 + GLCCI1 chr7 8043538 + Exonic hg19 Non-Cancer TCGA-BH-A0C3-11A 2 0 5'UTR-CDS Intra-chr p21.3 127701 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854180 - CBX3 chr7 26241365 + Exonic hg19 Non-Cancer TCGA-BH-A0DP-11A 4 3 Out-of-frame Inter-chr q15.1 p15.2 127702 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A0DP-11A 3 3 Out-of-frame Inter-chr q13.13 p12.3 127703 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A0DP-11A 2 5 3'UTR-CDS Intra-chr p15.4 127704 ChimerSeq STARFusion TCGA RNA-Seq NDUFV3-PKNOX1 NDUFV3 chr21 44317157 + PKNOX1 chr21 44424436 + Exonic hg19 Non-Cancer TCGA-BH-A0DP-11A 2 3 CDS-5'UTR Intra-chr q22.3 q22.3 Tumor suppressor gene Transcription factor 127705 ChimerSeq STARFusion TCGA RNA-Seq DAAM1-PRKCH DAAM1 chr14 59655486 + PRKCH chr14 61909829 + Exonic hg19 Non-Cancer TCGA-BH-A0DP-11A 2 1 5'UTR-CDS Intra-chr q23.1 q23.1 127706 ChimerSeq STARFusion TCGA RNA-Seq TMEM30A-MARCH5 TMEM30A chr6 75994118 - 2019_ 3_ 5_ chr10 94109106 + Exonic hg19 Non-Cancer TCGA-BH-A0DP-11A 2 0 Out-of-frame Inter-chr q14.1 q23.32 127707 ChimerSeq STARFusion TCGA RNA-Seq TTTY14-NCRNA00185 TTTY14 chrY 21238931 - NCRNA00185 chrY 21039091 - Exonic hg19 Non-Cancer TCGA-BH-A0DD-11A 3 3 Out-of-frame Intra-chr q11.222 127708 ChimerSeq STARFusion TCGA RNA-Seq PLIN1-PPP1R15A PLIN1 chr15 90210856 - PPP1R15A chr19 49377804 + Exonic hg19 Non-Cancer TCGA-BH-A0DD-11A 3 1 Out-of-frame Inter-chr q26.1 q13.33 127709 ChimerSeq STARFusion TCGA RNA-Seq CNRIP1-PPP3R1 CNRIP1 chr2 68544289 - PPP3R1 chr2 68444263 - Exonic hg19 Non-Cancer TCGA-BH-A0DD-11A 3 0 In-Frame Intra-chr p14 p14 127710 ChimerSeq STARFusion TCGA RNA-Seq SOCS5-LOC100134259 SOCS5 chr2 46926588 + LOC100134259 chr2 47083062 + Exonic hg19 Non-Cancer TCGA-BH-A0DD-11A 2 2 5'UTR-5'UTR Intra-chr p21 127711 ChimerSeq STARFusion TCGA RNA-Seq NEGR1-PTGR1 NEGR1 chr1 72748002 - PTGR1 chr9 114348445 - Exonic hg19 Non-Cancer TCGA-BH-A0DD-11A 2 0 In-Frame Inter-chr p31.1 q31.3 127712 ChimerSeq STARFusion TCGA RNA-Seq SPOP-SNRPA1 SPOP chr17 47753257 - SNRPA1 chr15 101827907 - Exonic hg19 Non-Cancer TCGA-BH-A0DD-11A 2 0 5'UTR-CDS Inter-chr q21.33 Oncogene Tumor suppressor gene q26.3 127713 ChimerSeq STARFusion TCGA RNA-Seq LOC283788-FRG1B LOC283788 chrUn_gl000219 97294 - FRG1B chr20 29625873 + Exonic hg19 Non-Cancer TCGA-BH-A18S-11A 2 11 Out-of-frame Inter-chr 127714 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A18S-11A 3 5 Out-of-frame Inter-chr q13.13 p12.3 127715 ChimerSeq STARFusion TCGA RNA-Seq RNA45S5-EIF4G2 RNA45S5 chrUn_gl000220 109799 + EIF4G2 chr11 10819405 - Exonic hg19 Non-Cancer TCGA-BH-A18S-11A 3 1 Out-of-frame Inter-chr p15.4 127716 ChimerSeq STARFusion TCGA RNA-Seq STARD13-MLL STARD13 chr13 33680895 - MLL chr11 118363772 + Exonic hg19 Non-Cancer TCGA-BH-A18S-11A 2 0 Out-of-frame Inter-chr q13.1 Tumor suppressor gene q23.3 127717 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A0AZ-11A 26 75 3'UTR-3'UTR Intra-chr 127718 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A0AZ-11A 17 46 Out-of-frame Intra-chr q11.22 q11.23 127719 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A0AZ-11A 17 21 Out-of-frame Intra-chr q11.22 q11.22 127720 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-BH-A0AZ-11A 9 0 Out-of-frame Inter-chr q21 q13.42 127721 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-BH-A0AZ-11A 5 10 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 127722 ChimerSeq STARFusion TCGA RNA-Seq LOC728606-KCTD1 LOC728606 chr18 24283356 - KCTD1 chr18 24081214 - Exonic hg19 Non-Cancer TCGA-BH-A0DH-11A 2 9 3'UTR-CDS Intra-chr q11.2 127723 ChimerSeq STARFusion TCGA RNA-Seq PTGES3-UBC PTGES3 chr12 57081782 - UBC chr12 125398320 - Exonic hg19 Non-Cancer TCGA-BH-A0DH-11A 2 1 CDS-5'UTR Intra-chr q13.3 q24.31 127724 ChimerSeq STARFusion TCGA RNA-Seq DUSP9-MYL9 DUSP9 chrX 152908065 + MYL9 chr20 35176435 + Exonic hg19 Non-Cancer TCGA-BH-A0DH-11A 2 0 5'UTR-CDS Inter-chr q28 Tumor suppressor gene q11.23 127725 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A0DO-11A 11 37 Out-of-frame Intra-chr q11.22 q11.23 127726 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A0DO-11A 11 17 Out-of-frame Intra-chr q11.22 q11.22 127727 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A0DO-11A 4 5 Out-of-frame Inter-chr q13.13 p12.3 127728 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-BH-A0DO-11A 3 5 5'UTR-CDS Intra-chr q13.1 q13.1 127729 ChimerSeq STARFusion TCGA RNA-Seq COL1A1-IGF1R COL1A1 chr17 48270001 - IGF1R chr15 99504159 + Exonic hg19 Non-Cancer TCGA-E9-A1N5-11A 15 1 Out-of-frame Inter-chr q21.33 Oncogene q26.3 TK:InsR Oncogene 127730 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-E9-A1N5-11A 4 16 Out-of-frame Intra-chr q11.22 q11.23 127731 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-E9-A1N5-11A 4 12 Out-of-frame Intra-chr q11.22 q11.22 127732 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-E9-A1N5-11A 4 4 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 127733 ChimerSeq STARFusion TCGA RNA-Seq COL1A1-NDUFA13 COL1A1 chr17 48263680 - NDUFA13 chr19 19627039 + Exonic hg19 Non-Cancer TCGA-E9-A1N5-11A 3 1 Out-of-frame Inter-chr q21.33 Oncogene p13.11 127734 ChimerSeq STARFusion TCGA RNA-Seq COL1A1-YJEFN3 COL1A1 chr17 48263680 - YJEFN3 chr19 19627039 + Exonic hg19 Non-Cancer TCGA-E9-A1N5-11A 3 1 Out-of-frame Inter-chr q21.33 Oncogene p13.11 127735 ChimerSeq STARFusion TCGA RNA-Seq FLOT2-KRT12 FLOT2 chr17 27224544 - KRT12 chr17 39023034 - Exonic hg19 Non-Cancer TCGA-BH-A1EV-11A 44 64 Out-of-frame Intra-chr q11.2 q21.2 127736 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A1EV-11A 9 13 3'UTR-CDS Intra-chr p15.4 127737 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A1EV-11A 9 12 Out-of-frame Inter-chr q13.13 p12.3 127738 ChimerSeq STARFusion TCGA RNA-Seq CTNND1-CACNG3 CTNND1 chr11 57529518 + CACNG3 chr16 24358055 + Exonic hg19 Non-Cancer TCGA-BH-A1EV-11A 7 17 5'UTR-CDS Inter-chr q12.1 Tumor suppressor gene p12.1 127739 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A1EV-11A 7 12 Out-of-frame Inter-chr q13.13 p12.3 127740 ChimerSeq STARFusion TCGA RNA-Seq MARVELD1-MEGF8 MARVELD1 chr10 99477355 + MEGF8 chr19 42854299 + Exonic hg19 Non-Cancer TCGA-BH-A1EV-11A 9 0 3'UTR-CDS Inter-chr q24.2 Tumor suppressor gene q13.2 127741 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-BH-A1EV-11A 7 0 Out-of-frame Inter-chr q11.2 p22.11 127742 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-BH-A1EV-11A 3 5 CDS-3'UTR Intra-chr q11.22 q22.2 127743 ChimerSeq STARFusion TCGA RNA-Seq MYEF2-PATL2 MYEF2 chr15 48458130 - PATL2 chr15 44968763 - Exonic hg19 Non-Cancer TCGA-BH-A1EV-11A 2 8 CDS-5'UTR Intra-chr q21.1 q21.1 127744 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-BH-A1EV-11A 3 1 3'UTR-5'UTR Intra-chr q12.1 127745 ChimerSeq STARFusion TCGA RNA-Seq OGDH-ZNF138 OGDH chr7 44664164 + ZNF138 chr7 64291829 + Exonic hg19 Non-Cancer TCGA-BH-A1EV-11A 2 1 In-Frame Intra-chr p13 q11.21 Transcription factor 127746 ChimerSeq STARFusion TCGA RNA-Seq PSD3-SNAP91 PSD3 chr8 18793544 - SNAP91 chr6 84285772 - Exonic hg19 Non-Cancer TCGA-BH-A1EV-11A 2 1 In-Frame Inter-chr p22 q14.2 127747 ChimerSeq STARFusion TCGA RNA-Seq ADAM28-STAG1 ADAM28 chr8 24157590 + STAG1 chr3 136117671 - Exonic hg19 Non-Cancer TCGA-BH-A1EV-11A 2 0 In-Frame Inter-chr p21.2 q22.3 127748 ChimerSeq STARFusion TCGA RNA-Seq SPOP-SNRPA1 SPOP chr17 47753257 - SNRPA1 chr15 101827907 - Exonic hg19 Non-Cancer TCGA-BH-A1EV-11A 2 0 5'UTR-CDS Inter-chr q21.33 Oncogene Tumor suppressor gene q26.3 127749 ChimerSeq STARFusion TCGA RNA-Seq PPP2R4-GLUL PPP2R4 chr9 131891278 + GLUL chr1 182354526 - Exonic hg19 Non-Cancer TCGA-E2-A1BC-11A 4 1 Out-of-frame Inter-chr Tumor suppressor gene q25.3 127750 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A1ET-11B 4 12 3'UTR-CDS Intra-chr p15.4 127751 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854180 - CBX3 chr7 26241365 + Exonic hg19 Non-Cancer TCGA-BH-A1ET-11B 3 13 Out-of-frame Inter-chr q15.1 p15.2 127752 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A1ET-11B 5 5 Out-of-frame Inter-chr q13.13 p12.3 127753 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-BH-A1ET-11B 3 4 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 127754 ChimerSeq STARFusion TCGA RNA-Seq ATF2-CHN1 ATF2 chr2 175945388 - CHN1 chr2 175816930 - Exonic hg19 Non-Cancer TCGA-BH-A1ET-11B 3 2 In-Frame Intra-chr q31.1 Transcription factor q31.1 127755 ChimerSeq STARFusion TCGA RNA-Seq PFKFB3-LOC399715 PFKFB3 chr10 6268328 + LOC399715 chr10 6368509 + Exonic hg19 Non-Cancer TCGA-BH-A1ET-11B 2 6 CDS-5'UTR Intra-chr p15.1 127756 ChimerSeq STARFusion TCGA RNA-Seq PDE6B-PPP2R2D PDE6B chr4 619882 + PPP2R2D chr10 133753533 + Exonic hg19 Non-Cancer TCGA-BH-A1ET-11B 3 0 Out-of-frame Inter-chr p16.3 q26.3 127757 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44648235 - Exonic hg19 Non-Cancer TCGA-BH-A18P-11A 10 13 CDS-5'UTR Intra-chr q21.31 127758 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A18P-11A 7 22 Out-of-frame Intra-chr q11.22 q11.23 127759 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A18P-11A 7 14 Out-of-frame Intra-chr q11.22 q11.22 127760 ChimerSeq STARFusion TCGA RNA-Seq NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer TCGA-BH-A18P-11A 9 2 Out-of-frame Intra-chr p11.2 127761 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A18P-11A 7 1 Out-of-frame Inter-chr q13.13 p12.3 127762 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A0DK-11A 13 48 Out-of-frame Intra-chr q11.22 q11.23 127763 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A0DK-11A 13 34 Out-of-frame Intra-chr q11.22 q11.22 127764 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-BH-A0DK-11A 13 0 Out-of-frame Inter-chr q21 q13.42 127765 ChimerSeq STARFusion TCGA RNA-Seq U3-KCTD1 U3 chr18 24283356 - KCTD1 chr18 24081214 - Exonic hg19 Non-Cancer TCGA-BH-A0DK-11A 4 13 Out-of-frame Intra-chr q11.2 127766 ChimerSeq STARFusion TCGA RNA-Seq U3-KCTD1 U3 chr18 24283356 - KCTD1 chr18 24161693 - Exonic hg19 Non-Cancer TCGA-BH-A0DK-11A 3 12 Out-of-frame Intra-chr q11.2 127767 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 Non-Cancer TCGA-AC-A2FM-11B 9 222 Out-of-frame Intra-chr q11.22 127768 ChimerSeq STARFusion TCGA RNA-Seq MXRA5-MGP MXRA5 chrX 3239791 - MGP chr12 15035214 - Exonic hg19 Non-Cancer TCGA-AC-A2FM-11B 3 1 Out-of-frame Inter-chr p22.33 p12.3 127769 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-AC-A2FM-11B 3 0 Out-of-frame Inter-chr q11.2 p22.11 127770 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 Non-Cancer TCGA-BH-A18R-11A 10 611 Out-of-frame Intra-chr q11.22 127771 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A18R-11A 6 3 CDS-5'UTR Intra-chr q21.31 127772 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A18R-11A 6 3 3'UTR-3'UTR Intra-chr 127773 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A18R-11A 6 3 Out-of-frame Inter-chr q13.13 p12.3 127774 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A18R-11A 3 13 3'UTR-CDS Intra-chr p15.4 127775 ChimerSeq STARFusion TCGA RNA-Seq PRKCH-FLJ22447 PRKCH chr14 61997313 + FLJ22447 chr14 62117680 + Exonic hg19 Non-Cancer TCGA-BH-A18R-11A 3 6 CDS-5'UTR Intra-chr q23.1 q23.1 127776 ChimerSeq STARFusion TCGA RNA-Seq LDLRAD3-PRR5L LDLRAD3 chr11 36120011 + PRR5L chr11 36317840 + Exonic hg19 Non-Cancer TCGA-BH-A18R-11A 3 1 CDS-5'UTR Intra-chr p13 p13 127777 ChimerSeq STARFusion TCGA RNA-Seq PFKFB3-LOC399715 PFKFB3 chr10 6268328 + LOC399715 chr10 6368509 + Exonic hg19 Non-Cancer TCGA-BH-A18R-11A 2 2 CDS-5'UTR Intra-chr p15.1 127778 ChimerSeq STARFusion TCGA RNA-Seq LARS2-LIMD1 LARS2 chr3 45565600 + LIMD1 chr3 45677642 + Exonic hg19 Non-Cancer TCGA-BH-A18R-11A 2 0 In-Frame Intra-chr p21.31 p21.31 Tumor suppressor gene 127779 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-A7-A0CH-11A 5 4 Out-of-frame Inter-chr q13.13 p12.3 127780 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-A7-A0CH-11A 3 4 Out-of-frame Inter-chr q13.13 p12.3 127781 ChimerSeq STARFusion TCGA RNA-Seq PDE6B-PPP2R2D PDE6B chr4 619882 + PPP2R2D chr10 133753533 + Exonic hg19 Non-Cancer TCGA-A7-A0CH-11A 4 0 Out-of-frame Inter-chr p16.3 q26.3 127782 ChimerSeq STARFusion TCGA RNA-Seq RNA45S5-PIP RNA45S5 chrUn_gl000220 115064 + PIP chr7 142836708 + Exonic hg19 Non-Cancer TCGA-A7-A0CH-11A 3 3 Out-of-frame Inter-chr q34 127783 ChimerSeq STARFusion TCGA RNA-Seq PIKFYVE-CAB39 PIKFYVE chr2 209180097 + CAB39 chr2 231674978 + Exonic hg19 Non-Cancer TCGA-A7-A0CH-11A 2 1 In-Frame Intra-chr q34 q37.1 127784 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-E9-A1N6-11A 6 11 Out-of-frame Inter-chr q13.13 p12.3 127785 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-E9-A1N6-11A 3 11 Out-of-frame Inter-chr q13.13 p12.3 127786 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-E9-A1N6-11A 2 6 3'UTR-CDS Intra-chr p15.4 127787 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-E9-A1N6-11A 3 1 CDS-3'UTR Intra-chr q11.22 q22.2 127788 ChimerSeq STARFusion TCGA RNA-Seq ATF2-CHN1 ATF2 chr2 175945388 - CHN1 chr2 175816930 - Exonic hg19 Non-Cancer TCGA-E9-A1N6-11A 2 2 In-Frame Intra-chr q31.1 Transcription factor q31.1 127789 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-E9-A1N6-11A 2 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 127790 ChimerSeq STARFusion TCGA RNA-Seq HIC2-PI4KAP2 HIC2 chr22 21797146 + PI4KAP2 chr22 21838423 - Exonic hg19 Non-Cancer TCGA-E9-A1N6-11A 2 1 CDS-3'UTR Intra-chr q11.21 Transcription factor q11.21 127791 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A1F8-11B 10 20 Out-of-frame Intra-chr q11.22 q11.23 127792 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A1F8-11B 10 9 Out-of-frame Intra-chr q11.22 q11.22 127793 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-E2-A1LB-11A 3 18 3'UTR-CDS Intra-chr p15.4 127794 ChimerSeq STARFusion TCGA RNA-Seq LOC100506368-TMEM135 LOC100506368 chr11 86669068 + TMEM135 chr11 86778736 + Exonic hg19 Non-Cancer TCGA-E2-A1LB-11A 2 1 5'UTR-5'UTR Intra-chr q14.2 127795 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-E9-A1N9-11A 6 5 CDS-5'UTR Intra-chr q21.31 127796 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-E9-A1N9-11A 6 3 3'UTR-3'UTR Intra-chr 127797 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-E9-A1N9-11A 5 2 3'UTR-CDS Intra-chr p15.4 127798 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005213 - POLA1 chrX 24721386 + Exonic hg19 Non-Cancer TCGA-E9-A1N9-11A 5 0 Out-of-frame Inter-chr q11.2 p22.11 127799 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-E9-A1N9-11A 3 1 3'UTR-5'UTR Intra-chr q12.1 127800 ChimerSeq STARFusion TCGA RNA-Seq LINC00624-FMO5 LINC00624 chr1 146986158 - FMO5 chr1 146696658 - Exonic hg19 Non-Cancer TCGA-E9-A1N9-11A 2 2 Out-of-frame Intra-chr q21.2 q21.1 127801 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A1FE-11B 13 9 CDS-5'UTR Intra-chr q21.31 127802 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A1FE-11B 13 4 3'UTR-3'UTR Intra-chr 127803 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A1FE-11B 7 22 3'UTR-CDS Intra-chr p15.4 127804 ChimerSeq STARFusion TCGA RNA-Seq MARVELD1-MEGF8 MARVELD1 chr10 99477355 + MEGF8 chr19 42854299 + Exonic hg19 Non-Cancer TCGA-BH-A1FE-11B 8 0 3'UTR-CDS Inter-chr q24.2 Tumor suppressor gene q13.2 127805 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7927150 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A1FE-11B 2 22 3'UTR-CDS Intra-chr p15.4 127806 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A1FE-11B 4 5 Out-of-frame Inter-chr q13.13 p12.3 127807 ChimerSeq STARFusion TCGA RNA-Seq ACTB-LOC644936 ACTB chr7 5567635 - LOC644936 chr5 79595640 - Exonic hg19 Non-Cancer TCGA-BH-A1FE-11B 3 3 Out-of-frame Inter-chr p22.1 127808 ChimerSeq STARFusion TCGA RNA-Seq LDLRAD3-PRR5L LDLRAD3 chr11 36120011 + PRR5L chr11 36317840 + Exonic hg19 Non-Cancer TCGA-BH-A1FE-11B 3 2 CDS-5'UTR Intra-chr p13 p13 127809 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-BH-A1FE-11B 2 6 CDS-5'UTR Intra-chr p23.2 127810 ChimerSeq STARFusion TCGA RNA-Seq RNA45S5-C16orf58 RNA45S5 chrUn_gl000220 117981 + C16orf58 chr16 31519671 - Exonic hg19 Non-Cancer TCGA-BH-A1FE-11B 3 1 Out-of-frame Inter-chr p11.2 127811 ChimerSeq STARFusion TCGA RNA-Seq APP-YWHAE APP chr21 27253249 - YWHAE chr17 1264502 - Exonic hg19 Non-Cancer TCGA-BH-A1FE-11B 3 0 Out-of-frame Inter-chr q21.3 p13.3 127812 ChimerSeq STARFusion TCGA RNA-Seq LOC154761-FAM115A LOC154761 chr7 143533733 - FAM115A chr7 143560889 - Exonic hg19 Non-Cancer TCGA-BH-A1FE-11B 2 4 3'UTR-CDS Intra-chr 127813 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-BH-A1FE-11B 2 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 127814 ChimerSeq STARFusion TCGA RNA-Seq AGPAT6-ADAM32 AGPAT6 chr8 41456823 + ADAM32 chr8 39079129 + Exonic hg19 Non-Cancer TCGA-BH-A18J-11A 4 29 In-Frame Intra-chr 127815 ChimerSeq STARFusion TCGA RNA-Seq AGPAT6-ADAM32 AGPAT6 chr8 41456823 + ADAM32 chr8 39080559 + Exonic hg19 Non-Cancer TCGA-BH-A18J-11A 4 29 In-Frame Intra-chr 127816 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A18J-11A 7 11 Out-of-frame Intra-chr q11.22 q11.23 127817 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A18J-11A 7 7 Out-of-frame Intra-chr q11.22 q11.22 127818 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A18M-11A 7 6 Out-of-frame Inter-chr q13.13 p12.3 127819 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-BH-A18M-11A 2 1 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 127820 ChimerSeq STARFusion TCGA RNA-Seq TIAL1-SEC23IP TIAL1 chr10 121355946 - SEC23IP chr10 121685548 + Exonic hg19 Non-Cancer TCGA-BH-A0BJ-11A 2 0 Out-of-frame Intra-chr q26.11 q26.11 127821 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A0H5-11A 20 32 3'UTR-3'UTR Intra-chr 127822 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A0H5-11A 7 35 Out-of-frame Intra-chr q11.22 q11.23 127823 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A0H5-11A 7 15 Out-of-frame Intra-chr q11.22 q11.22 127824 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A0H5-11A 7 2 Out-of-frame Inter-chr q13.13 p12.3 127825 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A0H5-11A 5 2 Out-of-frame Inter-chr q13.13 p12.3 127826 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854180 - CBX3 chr7 26241365 + Exonic hg19 Non-Cancer TCGA-BH-A0H5-11A 3 8 Out-of-frame Inter-chr q15.1 p15.2 127827 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-BH-A0H5-11A 2 11 5'UTR-CDS Intra-chr q13.1 q13.1 127828 ChimerSeq STARFusion TCGA RNA-Seq ITGA9-GOLGA4 ITGA9 chr3 37523098 + GOLGA4 chr3 37340324 + Exonic hg19 Non-Cancer TCGA-E2-A1LS-11A 21 42 In-Frame Intra-chr p22.2 Oncogene p22.2 127829 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-E2-A1LS-11A 4 7 Out-of-frame Inter-chr q13.13 p12.3 127830 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-E2-A1LS-11A 2 6 CDS-5'UTR Intra-chr p23.2 127831 ChimerSeq STARFusion TCGA RNA-Seq CNRIP1-PPP3R1 CNRIP1 chr2 68544289 - PPP3R1 chr2 68444263 - Exonic hg19 Non-Cancer TCGA-E2-A1LS-11A 2 5 In-Frame Intra-chr p14 p14 127832 ChimerSeq STARFusion TCGA RNA-Seq GNG10-UGCG GNG10 chr9 114429226 + UGCG chr9 114676885 + Exonic hg19 Non-Cancer TCGA-E2-A1LS-11A 2 5 3'UTR-CDS Intra-chr q31.3 q31.3 127833 ChimerSeq STARFusion TCGA RNA-Seq PAK1-THRSP PAK1 chr11 77184597 - THRSP chr11 77778705 + Exonic hg19 Non-Cancer TCGA-E2-A1LS-11A 2 1 Out-of-frame Intra-chr q14.1 STE:STE20 q14.1 127834 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-A7-A13F-11A 4 15 5'UTR-CDS Intra-chr q13.1 q13.1 127835 ChimerSeq STARFusion TCGA RNA-Seq MGC70870-CTBP2 MGC70870 chr17_gl000205_random 119301 + CTBP2 chr10 126677244 - Exonic hg19 Non-Cancer TCGA-A7-A13F-11A 3 1 Out-of-frame Inter-chr q26.13 127836 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-A7-A13F-11A 3 0 Out-of-frame Inter-chr q11.2 p22.11 127837 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-A7-A13F-11A 2 4 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 127838 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A208-11A 17 55 Out-of-frame Intra-chr q11.22 q11.23 127839 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A208-11A 17 29 Out-of-frame Intra-chr q11.22 q11.22 127840 ChimerSeq STARFusion TCGA RNA-Seq FLNA-IGH@ FLNA chrX 153577921 - IGH@ chr14 106054734 - Exonic hg19 Non-Cancer TCGA-BH-A208-11A 11 3 Out-of-frame Inter-chr q28 Tumor suppressor gene 32.33 127841 ChimerSeq STARFusion TCGA RNA-Seq FLNA-IGHA2 FLNA chrX 153577921 - IGHA2 chr14 106054734 - Exonic hg19 Non-Cancer TCGA-BH-A208-11A 11 1 Out-of-frame Inter-chr q28 Tumor suppressor gene 127842 ChimerSeq STARFusion TCGA RNA-Seq HCFC1-IGH@ HCFC1 chrX 153222120 - IGH@ chr14 106054733 - Exonic hg19 Non-Cancer TCGA-BH-A208-11A 9 0 Out-of-frame Inter-chr q28 32.33 127843 ChimerSeq STARFusion TCGA RNA-Seq HCFC1-IGHA2 HCFC1 chrX 153222120 - IGHA2 chr14 106054733 - Exonic hg19 Non-Cancer TCGA-BH-A208-11A 9 0 Out-of-frame Inter-chr q28 127844 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-BH-A208-11A 9 0 Out-of-frame Inter-chr q21 q13.42 127845 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-BH-A208-11A 8 4 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 127846 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A0B7-11A 5 15 3'UTR-CDS Intra-chr p15.4 127847 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A0B7-11A 4 3 Out-of-frame Inter-chr q13.13 p12.3 127848 ChimerSeq STARFusion TCGA RNA-Seq PFKFB3-LOC399715 PFKFB3 chr10 6268328 + LOC399715 chr10 6368509 + Exonic hg19 Non-Cancer TCGA-BH-A0B7-11A 2 10 CDS-5'UTR Intra-chr p15.1 127849 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005213 - POLA1 chrX 24721386 + Exonic hg19 Non-Cancer TCGA-BH-A0B7-11A 4 0 Out-of-frame Inter-chr q11.2 p22.11 127850 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A0B7-11A 3 3 Out-of-frame Inter-chr q13.13 p12.3 127851 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-BH-A0B7-11A 2 6 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 127852 ChimerSeq STARFusion TCGA RNA-Seq PRKCH-FLJ22447 PRKCH chr14 61997313 + FLJ22447 chr14 62117680 + Exonic hg19 Non-Cancer TCGA-BH-A0B7-11A 2 4 CDS-5'UTR Intra-chr q23.1 q23.1 127853 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A1FN-11A 9 19 Out-of-frame Inter-chr q13.13 p12.3 127854 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A1FN-11A 6 19 Out-of-frame Inter-chr q13.13 p12.3 127855 ChimerSeq STARFusion TCGA RNA-Seq IGJ-FGF23 IGJ chr4 71521266 - FGF23 chr12 4479175 - Exonic hg19 Non-Cancer TCGA-BH-A1FN-11A 10 0 Out-of-frame Inter-chr p13.32 127856 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854180 - CBX3 chr7 26241365 + Exonic hg19 Non-Cancer TCGA-BH-A1FN-11A 4 7 Out-of-frame Inter-chr q15.1 p15.2 127857 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854971 - CBX3 chr7 26241389 + Exonic hg19 Non-Cancer TCGA-BH-A1FN-11A 3 7 Out-of-frame Inter-chr q15.1 p15.2 127858 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A1FN-11A 3 4 3'UTR-CDS Intra-chr p15.4 127859 ChimerSeq STARFusion TCGA RNA-Seq PRKCH-FLJ22447 PRKCH chr14 61997313 + FLJ22447 chr14 62117680 + Exonic hg19 Non-Cancer TCGA-BH-A1FN-11A 3 1 CDS-5'UTR Intra-chr q23.1 q23.1 127860 ChimerSeq STARFusion TCGA RNA-Seq ARL15-NDUFS4 ARL15 chr5 53606262 - NDUFS4 chr5 52942063 + Exonic hg19 Non-Cancer TCGA-BH-A1FN-11A 2 1 Out-of-frame Intra-chr q11.2 q11.2 127861 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-E9-A1RC-11A 2 22 5'UTR-CDS Intra-chr q13.1 q13.1 127862 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-E9-A1RC-11A 3 2 3'UTR-5'UTR Intra-chr q12.1 127863 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-E9-A1RC-11A 3 2 Out-of-frame Inter-chr q13.13 p12.3 127864 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-E9-A1RC-11A 2 3 CDS-5'UTR Intra-chr p23.2 127865 ChimerSeq STARFusion TCGA RNA-Seq CNRIP1-PPP3R1 CNRIP1 chr2 68544289 - PPP3R1 chr2 68444263 - Exonic hg19 Non-Cancer TCGA-E9-A1RC-11A 2 2 In-Frame Intra-chr p14 p14 127866 ChimerSeq STARFusion TCGA RNA-Seq IGSF5-PCP4 IGSF5 chr21 41165540 + PCP4 chr21 41270401 + Exonic hg19 Non-Cancer TCGA-E9-A1RC-11A 2 1 In-Frame Intra-chr q22.2 q22.2 127867 ChimerSeq STARFusion TCGA RNA-Seq LOC100506368-TMEM135 LOC100506368 chr11 86669068 + TMEM135 chr11 86778736 + Exonic hg19 Non-Cancer TCGA-E9-A1RC-11A 2 1 5'UTR-5'UTR Intra-chr q14.2 127868 ChimerSeq STARFusion TCGA RNA-Seq PRKCH-FLJ22447 PRKCH chr14 62014604 + FLJ22447 chr14 62117680 + Exonic hg19 Non-Cancer TCGA-E9-A1RC-11A 2 1 CDS-5'UTR Intra-chr q23.1 q23.1 127869 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A18N-11A 6 4 Out-of-frame Inter-chr q13.13 p12.3 127870 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A18N-11A 5 7 CDS-5'UTR Intra-chr q21.31 127871 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A18N-11A 5 4 3'UTR-3'UTR Intra-chr 127872 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A18N-11A 4 4 Out-of-frame Inter-chr q13.13 p12.3 127873 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A18N-11A 2 5 3'UTR-CDS Intra-chr p15.4 127874 ChimerSeq STARFusion TCGA RNA-Seq LOC728606-KCTD1 LOC728606 chr18 24283356 - KCTD1 chr18 24081214 - Exonic hg19 Non-Cancer TCGA-BH-A18N-11A 2 4 3'UTR-CDS Intra-chr q11.2 127875 ChimerSeq STARFusion TCGA RNA-Seq XBP1-MTERFD1 XBP1 chr22 29196286 - MTERFD1 chr8 97258159 - Exonic hg19 Non-Cancer TCGA-BH-A18N-11A 2 3 Out-of-frame Inter-chr q12.1 Transcription factor 127876 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-BH-A18N-11A 2 1 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 127877 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 Non-Cancer TCGA-BH-A1FR-11B 3 169 Out-of-frame Intra-chr q11.22 127878 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A1FR-11B 5 1 CDS-5'UTR Intra-chr q21.31 127879 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A1FR-11B 5 1 3'UTR-3'UTR Intra-chr 127880 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A1FR-11B 3 1 Out-of-frame Inter-chr q13.13 p12.3 127881 ChimerSeq STARFusion TCGA RNA-Seq DSTN-PRMT2 DSTN chr20 17585257 + PRMT2 chr21 48073583 + Exonic hg19 Non-Cancer TCGA-BH-A1FR-11B 3 0 Out-of-frame Inter-chr p12.1 q22.3 127882 ChimerSeq STARFusion TCGA RNA-Seq LOC729852-GLCCI1 LOC729852 chr7 7841374 + GLCCI1 chr7 8043538 + Exonic hg19 Non-Cancer TCGA-BH-A1FR-11B 2 1 5'UTR-CDS Intra-chr p21.3 127883 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGH@ STK25 chr2 242434915 - IGH@ chr14 106175004 - Exonic hg19 Non-Cancer TCGA-BH-A0HK-11A 18 2 Out-of-frame Inter-chr q37.3 32.33 127884 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGHA1 STK25 chr2 242434915 - IGHA1 chr14 106175004 - Exonic hg19 Non-Cancer TCGA-BH-A0HK-11A 18 2 Out-of-frame Inter-chr q37.3 127885 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A0HK-11A 7 12 Out-of-frame Intra-chr q11.22 q11.23 127886 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A0HK-11A 7 5 Out-of-frame Intra-chr q11.22 q11.22 127887 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-E9-A1N4-11A 14 13 CDS-5'UTR Intra-chr q21.31 127888 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-E9-A1N4-11A 14 10 3'UTR-3'UTR Intra-chr 127889 ChimerSeq STARFusion TCGA RNA-Seq PFKFB3-LOC399715 PFKFB3 chr10 6268328 + LOC399715 chr10 6368509 + Exonic hg19 Non-Cancer TCGA-E9-A1N4-11A 2 13 CDS-5'UTR Intra-chr p15.1 127890 ChimerSeq STARFusion TCGA RNA-Seq IPP-OCIAD1 IPP chr1 46211792 - OCIAD1 chr4 48833244 + Exonic hg19 Non-Cancer TCGA-E9-A1N4-11A 2 7 Out-of-frame Inter-chr p34.1 p11 127891 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-E9-A1N4-11A 2 6 3'UTR-CDS Intra-chr p15.4 127892 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-E9-A1N4-11A 2 4 CDS-5'UTR Intra-chr p23.2 127893 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-E9-A1N4-11A 3 0 Out-of-frame Inter-chr q11.2 p22.11 127894 ChimerSeq STARFusion TCGA RNA-Seq PRKCH-FLJ22447 PRKCH chr14 61997313 + FLJ22447 chr14 62117680 + Exonic hg19 Non-Cancer TCGA-E9-A1N4-11A 2 4 CDS-5'UTR Intra-chr q23.1 q23.1 127895 ChimerSeq STARFusion TCGA RNA-Seq LOC729852-GLCCI1 LOC729852 chr7 7841374 + GLCCI1 chr7 8043538 + Exonic hg19 Non-Cancer TCGA-E9-A1N4-11A 2 2 5'UTR-CDS Intra-chr p21.3 127896 ChimerSeq STARFusion TCGA RNA-Seq POC1B-DUSP6 POC1B chr12 89860547 - DUSP6 chr12 89743338 - Exonic hg19 Non-Cancer TCGA-E9-A1N4-11A 2 1 Out-of-frame Intra-chr q21.33 q21.33 Tumor suppressor gene 127897 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 Non-Cancer TCGA-AC-A2FB-11A 18 290 Out-of-frame Intra-chr q11.22 127898 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-AC-A2FB-11A 3 4 Out-of-frame Inter-chr q13.13 p12.3 127899 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-AC-A2FB-11A 3 3 3'UTR-CDS Intra-chr p15.4 127900 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-AC-A2FB-11A 3 0 CDS-5'UTR Intra-chr q21.31 127901 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-AC-A2FB-11A 3 0 3'UTR-3'UTR Intra-chr 127902 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-AC-A2FB-11A 3 0 Out-of-frame Inter-chr q21 q13.42 127903 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 Non-Cancer TCGA-BH-A203-11A 3 76 Out-of-frame Intra-chr q11.22 127904 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A203-11A 5 12 Out-of-frame Inter-chr q13.13 p12.3 127905 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A203-11A 5 7 3'UTR-CDS Intra-chr p15.4 127906 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A203-11A 5 5 CDS-5'UTR Intra-chr q21.31 127907 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A203-11A 3 12 Out-of-frame Inter-chr q13.13 p12.3 127908 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A203-11A 5 3 3'UTR-3'UTR Intra-chr 127909 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-BH-A203-11A 4 2 CDS-5'UTR Intra-chr p23.2 127910 ChimerSeq STARFusion TCGA RNA-Seq NDUFV3-PKNOX1 NDUFV3 chr21 44317157 + PKNOX1 chr21 44424436 + Exonic hg19 Non-Cancer TCGA-BH-A203-11A 4 0 CDS-5'UTR Intra-chr q22.3 q22.3 Tumor suppressor gene Transcription factor 127911 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7927150 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A203-11A 2 7 3'UTR-CDS Intra-chr p15.4 127912 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-BH-A203-11A 3 0 Out-of-frame Inter-chr q11.2 p22.11 127913 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-BH-A203-11A 2 2 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 127914 ChimerSeq STARFusion TCGA RNA-Seq EIF4E3-FOXP1 EIF4E3 chr3 71739161 - FOXP1 chr3 71542706 - Exonic hg19 Non-Cancer TCGA-BH-A203-11A 2 0 CDS-5'UTR Intra-chr p13 p13 Oncogene Tumor suppressor gene Transcription factor 127915 ChimerSeq STARFusion TCGA RNA-Seq EPS15-ELMOD3 EPS15 chr1 51868107 - ELMOD3 chr2 85584090 + Exonic hg19 Non-Cancer TCGA-BH-A203-11A 2 0 Out-of-frame Inter-chr p32.3 p11.2 127916 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-BH-A0B3-11B 25 0 Out-of-frame Inter-chr q21 q13.42 127917 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A0B3-11B 13 11 3'UTR-3'UTR Intra-chr 127918 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A0B3-11B 8 16 Out-of-frame Intra-chr q11.22 q11.23 127919 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A0B3-11B 8 10 Out-of-frame Intra-chr q11.22 q11.22 127920 ChimerSeq STARFusion TCGA RNA-Seq PDE6B-PPP2R2D PDE6B chr4 619882 + PPP2R2D chr10 133747960 + Exonic hg19 Non-Cancer TCGA-BH-A0B8-11A 10 0 Out-of-frame Inter-chr p16.3 q26.3 127921 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-BH-A0B8-11A 2 10 5'UTR-CDS Intra-chr q13.1 q13.1 127922 ChimerSeq STARFusion TCGA RNA-Seq COL8A1-CMSS1 COL8A1 chr3 99513226 + CMSS1 chr3 99865817 + Exonic hg19 Non-Cancer TCGA-BH-A0B8-11A 3 3 Out-of-frame Intra-chr q12.1 q12.1 127923 ChimerSeq STARFusion TCGA RNA-Seq NCK2-FHL2 NCK2 chr2 106471745 + FHL2 chr2 106002997 - Exonic hg19 Non-Cancer TCGA-BH-A0B8-11A 3 1 CDS-5'UTR Intra-chr q12.2 q12.2 127924 ChimerSeq STARFusion TCGA RNA-Seq ADH1B-LOC100507053 ADH1B chr4 100242471 - LOC100507053 chr4 100212094 + Exonic hg19 Non-Cancer TCGA-BH-A0B8-11A 2 1 Out-of-frame Intra-chr q23 127925 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-BH-A0B8-11A 2 0 3'UTR-5'UTR Intra-chr q12.1 127926 ChimerSeq STARFusion TCGA RNA-Seq PRKCH-FLJ22447 PRKCH chr14 61997313 + FLJ22447 chr14 62117680 + Exonic hg19 Non-Cancer TCGA-BH-A1FC-11A 2 1 CDS-5'UTR Intra-chr q23.1 q23.1 127927 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-E2-A153-11A 6 7 Out-of-frame Inter-chr q13.13 p12.3 127928 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005213 - POLA1 chrX 24721386 + Exonic hg19 Non-Cancer TCGA-E2-A153-11A 7 0 Out-of-frame Inter-chr q11.2 p22.11 127929 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-E2-A153-11A 6 3 CDS-5'UTR Intra-chr q21.31 127930 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-E2-A153-11A 6 0 3'UTR-3'UTR Intra-chr 127931 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A0BQ-11A 3 4 Out-of-frame Inter-chr q13.13 p12.3 127932 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A0BQ-11A 3 4 Out-of-frame Inter-chr q13.13 p12.3 127933 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-BH-A0BQ-11A 3 2 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 127934 ChimerSeq STARFusion TCGA RNA-Seq UVSSA-CTBP1 UVSSA chr4 1349033 + CTBP1 chr4 1222131 - Exonic hg19 Non-Cancer TCGA-BH-A0BQ-11A 2 1 In-Frame Intra-chr p16.3 p16.3 127935 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A0DT-11A 9 57 Out-of-frame Intra-chr q11.22 q11.23 127936 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A0DT-11A 10 37 3'UTR-3'UTR Intra-chr 127937 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A0DT-11A 9 25 Out-of-frame Intra-chr q11.22 q11.22 127938 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A0DT-11A 7 5 Out-of-frame Inter-chr q13.13 p12.3 127939 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A0DT-11A 3 4 Out-of-frame Inter-chr q13.13 p12.3 127940 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-GI-A2C9-11A 6 2 Out-of-frame Inter-chr q13.13 p12.3 127941 ChimerSeq STARFusion TCGA RNA-Seq FAP-IFIH1 FAP chr2 163074496 - IFIH1 chr2 163130454 - Exonic hg19 Non-Cancer TCGA-GI-A2C9-11A 3 6 In-Frame Intra-chr q24.2 q24.2 127942 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-GI-A2C9-11A 2 7 CDS-5'UTR Intra-chr p23.2 127943 ChimerSeq STARFusion TCGA RNA-Seq LOC729852-GLCCI1 LOC729852 chr7 7841374 + GLCCI1 chr7 8043538 + Exonic hg19 Non-Cancer TCGA-GI-A2C9-11A 2 3 5'UTR-CDS Intra-chr p21.3 127944 ChimerSeq STARFusion TCGA RNA-Seq ATF2-CHN1 ATF2 chr2 175945388 - CHN1 chr2 175816930 - Exonic hg19 Non-Cancer TCGA-GI-A2C9-11A 2 1 In-Frame Intra-chr q31.1 Transcription factor q31.1 127945 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-E2-A15I-11A 5 2 CDS-5'UTR Intra-chr q21.31 127946 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-E2-A15I-11A 5 2 Out-of-frame Inter-chr q13.13 p12.3 127947 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-E2-A15I-11A 5 2 Out-of-frame Inter-chr q13.13 p12.3 127948 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-E2-A15I-11A 5 1 3'UTR-3'UTR Intra-chr 127949 ChimerSeq STARFusion TCGA RNA-Seq GNG10-UGCG GNG10 chr9 114429226 + UGCG chr9 114676885 + Exonic hg19 Non-Cancer TCGA-E2-A15I-11A 2 5 3'UTR-CDS Intra-chr q31.3 q31.3 127950 ChimerSeq STARFusion TCGA RNA-Seq DBX2-NELL2 DBX2 chr12 45417490 - NELL2 chr12 45269683 - Exonic hg19 Non-Cancer TCGA-E2-A15I-11A 2 0 Out-of-frame Intra-chr q12 Transcription factor q12 127951 ChimerSeq STARFusion TCGA RNA-Seq ADH1C-LOC100507053 ADH1C chr4 100266406 - LOC100507053 chr4 100205919 + Exonic hg19 Non-Cancer TCGA-BH-A204-11A 4 1 Out-of-frame Intra-chr q23 127952 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-BH-A204-11A 2 3 CDS-5'UTR Intra-chr p23.2 127953 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-A7-A0CE-11A 19 0 Out-of-frame Inter-chr q21 q13.42 127954 ChimerSeq STARFusion TCGA RNA-Seq TRPM7-SPPL2A TRPM7 chr15 50978728 - SPPL2A chr15 51041943 - Exonic hg19 Non-Cancer TCGA-A7-A0CE-11A 8 16 In-Frame Intra-chr q21.2 q21.2 127955 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-A7-A0CE-11A 7 18 Out-of-frame Intra-chr q11.22 q11.23 127956 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-A7-A0CE-11A 7 14 Out-of-frame Intra-chr q11.22 q11.22 127957 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A1FG-11B 9 5 Out-of-frame Inter-chr q13.13 p12.3 127958 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A1FG-11B 5 4 Out-of-frame Inter-chr q13.13 p12.3 127959 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A1FG-11B 4 8 Out-of-frame Intra-chr q11.22 q11.23 127960 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A1FG-11B 4 7 Out-of-frame Intra-chr q11.22 q11.22 127961 ChimerSeq STARFusion TCGA RNA-Seq MYH9-CACNG2 MYH9 chr22 36783852 - CACNG2 chr22 36962540 - Exonic hg19 Non-Cancer TCGA-BH-A0BW-11A 47 172 5'UTR-CDS Intra-chr q12.3 Oncogene Tumor suppressor gene q12.3 127962 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A0BW-11A 4 4 Out-of-frame Inter-chr q13.13 p12.3 127963 ChimerSeq STARFusion TCGA RNA-Seq ZNF780A-PAFAH1B1 ZNF780A chr19 40587726 - PAFAH1B1 chr17 2541393 + Exonic hg19 Non-Cancer TCGA-BH-A0BW-11A 2 0 Out-of-frame Inter-chr Transcription factor p13.3 Tumor suppressor gene 127964 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-A7-A0D9-11A 27 0 Out-of-frame Inter-chr q21 q13.42 127965 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-A7-A0D9-11A 10 15 Out-of-frame Intra-chr q11.22 q11.23 127966 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-A7-A0D9-11A 10 8 Out-of-frame Intra-chr q11.22 q11.22 127967 ChimerSeq STARFusion TCGA RNA-Seq DNAJC25-UGCG DNAJC25 chr9 114429226 + UGCG chr9 114676885 + Exonic hg19 Non-Cancer TCGA-A7-A0D9-11A 4 3 Out-of-frame Intra-chr q31.3 q31.3 127968 ChimerSeq STARFusion TCGA RNA-Seq GNG10-UGCG GNG10 chr9 114429226 + UGCG chr9 114676885 + Exonic hg19 Non-Cancer TCGA-A7-A0D9-11A 4 3 3'UTR-CDS Intra-chr q31.3 q31.3 127969 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-E9-A1NF-11A 12 39 Out-of-frame Intra-chr q11.22 q11.23 127970 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-E9-A1NF-11A 18 0 Out-of-frame Inter-chr q21 q13.42 127971 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-E9-A1NF-11A 12 22 Out-of-frame Intra-chr q11.22 q11.22 127972 ChimerSeq STARFusion TCGA RNA-Seq PLIN4-TSKU PLIN4 chr19 4510458 - TSKU chr11 76508344 + Exonic hg19 Non-Cancer TCGA-E9-A1NF-11A 10 1 Out-of-frame Inter-chr p13.3 q13.5 127973 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-E9-A1NF-11A 3 19 5'UTR-CDS Intra-chr q13.1 q13.1 127974 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-E2-A158-11A 10 19 Out-of-frame Intra-chr q11.22 q11.23 127975 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-E2-A158-11A 10 15 Out-of-frame Intra-chr q11.22 q11.22 127976 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-E2-A158-11A 8 0 Out-of-frame Inter-chr q21 q13.42 127977 ChimerSeq STARFusion TCGA RNA-Seq LINC00623-SEC22B LINC00623 chr1 144340526 - SEC22B chr1 145103908 + Exonic hg19 Non-Cancer TCGA-E2-A158-11A 3 3 Out-of-frame Intra-chr p11.2 p12 127978 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A0AU-11A 6 26 Out-of-frame Intra-chr q11.22 q11.23 127979 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-BH-A0AU-11A 12 0 Out-of-frame Inter-chr q21 q13.42 127980 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A0AU-11A 6 14 Out-of-frame Intra-chr q11.22 q11.22 127981 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-E2-A1LH-11A 5 19 Out-of-frame Intra-chr q11.22 q11.23 127982 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-E2-A1LH-11A 5 9 Out-of-frame Intra-chr q11.22 q11.22 127983 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-E2-A1LH-11A 6 2 Out-of-frame Inter-chr q13.13 p12.3 127984 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-E9-A1NG-11A 2 1 3'UTR-5'UTR Intra-chr q12.1 127985 ChimerSeq STARFusion TCGA RNA-Seq ATF2-CHN1 ATF2 chr2 175945388 - CHN1 chr2 175816930 - Exonic hg19 Non-Cancer TCGA-E9-A1NG-11A 2 0 In-Frame Intra-chr q31.1 Transcription factor q31.1 127986 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A1EO-11A 9 10 Out-of-frame Inter-chr q13.13 p12.3 127987 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A1EO-11A 8 10 Out-of-frame Inter-chr q13.13 p12.3 127988 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-BH-A1EO-11A 5 16 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 127989 ChimerSeq STARFusion TCGA RNA-Seq PDE4DIP-LOC653513 PDE4DIP chr1 145015860 - LOC653513 chr1 144679969 - Exonic hg19 Non-Cancer TCGA-BH-A1EO-11A 3 24 Out-of-frame Intra-chr q21.2 Oncogene 127990 ChimerSeq STARFusion TCGA RNA-Seq LOC440311-GLTSCR2 LOC440311 chr15 95398897 + GLTSCR2 chr19 48248941 + Exonic hg19 Non-Cancer TCGA-BH-A1EO-11A 3 12 Out-of-frame Inter-chr Tumor suppressor gene 127991 ChimerSeq STARFusion TCGA RNA-Seq COL8A1-CMSS1 COL8A1 chr3 99513226 + CMSS1 chr3 99865817 + Exonic hg19 Non-Cancer TCGA-BH-A1EO-11A 3 8 Out-of-frame Intra-chr q12.1 q12.1 127992 ChimerSeq STARFusion TCGA RNA-Seq CNRIP1-PPP3R1 CNRIP1 chr2 68544289 - PPP3R1 chr2 68444263 - Exonic hg19 Non-Cancer TCGA-BH-A1EO-11A 4 1 In-Frame Intra-chr p14 p14 127993 ChimerSeq STARFusion TCGA RNA-Seq VIM-RPPH1 VIM chr10 17279578 + RPPH1 chr14 20811230 - Exonic hg19 Non-Cancer TCGA-BH-A1EO-11A 3 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q11.2 127994 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-BH-A1EO-11A 2 2 CDS-5'UTR Intra-chr p23.2 127995 ChimerSeq STARFusion TCGA RNA-Seq PRKCH-FLJ22447 PRKCH chr14 61997313 + FLJ22447 chr14 62117680 + Exonic hg19 Non-Cancer TCGA-BH-A1EO-11A 2 2 CDS-5'UTR Intra-chr q23.1 q23.1 127996 ChimerSeq STARFusion TCGA RNA-Seq CCDC36-RHOA CCDC36 chr3 49249269 + RHOA chr3 49405981 - Exonic hg19 Non-Cancer TCGA-BH-A1EO-11A 2 1 Out-of-frame Intra-chr p21.31 p21.31 Oncogene Tumor suppressor gene 127997 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A1EO-11A 2 0 CDS-5'UTR Intra-chr q21.31 127998 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A1EO-11A 2 0 3'UTR-3'UTR Intra-chr 127999 ChimerSeq STARFusion TCGA RNA-Seq TWISTNB-TAX1BP1 TWISTNB chr7 19748386 - TAX1BP1 chr7 27839584 + Exonic hg19 Non-Cancer TCGA-BH-A1EO-11A 2 0 Out-of-frame Intra-chr p21.1 p15.2 128000 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-E2-A15M-11A 6 4 Out-of-frame Inter-chr q13.13 p12.3 128001 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-E2-A15M-11A 4 4 3'UTR-5'UTR Intra-chr q12.1 128002 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-E2-A15M-11A 2 7 3'UTR-CDS Intra-chr p15.4 128003 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-E2-A15M-11A 2 4 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 128004 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-E2-A15M-11A 2 1 CDS-5'UTR Intra-chr p23.2 128005 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677322 + IGLL5 chr22 23235961 + Exonic hg19 Non-Cancer TCGA-BH-A0BZ-11A 3 45 Out-of-frame Intra-chr q11.22 128006 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A0BZ-11A 7 1 CDS-5'UTR Intra-chr q21.31 128007 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A0BZ-11A 7 1 3'UTR-3'UTR Intra-chr 128008 ChimerSeq STARFusion TCGA RNA-Seq LOC728606-KCTD1 LOC728606 chr18 24283356 - KCTD1 chr18 24081214 - Exonic hg19 Non-Cancer TCGA-BH-A0BZ-11A 3 12 3'UTR-CDS Intra-chr q11.2 128009 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A0BZ-11A 4 1 Out-of-frame Inter-chr q13.13 p12.3 128010 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A0BZ-11A 2 3 3'UTR-CDS Intra-chr p15.4 128011 ChimerSeq STARFusion TCGA RNA-Seq PRR13-SEC24B PRR13 chr12 53837557 + SEC24B chr4 110459649 + Exonic hg19 Non-Cancer TCGA-BH-A0BZ-11A 2 0 In-Frame Inter-chr q13.13 q25 128012 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-E9-A1RH-11A 4 20 Out-of-frame Intra-chr q11.22 q11.23 128013 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-E9-A1RH-11A 4 14 Out-of-frame Intra-chr q11.22 q11.22 128014 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-E9-A1RH-11A 6 3 Out-of-frame Inter-chr q13.13 p12.3 128015 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-BH-A0BM-11A 12 0 Out-of-frame Inter-chr q21 q13.42 128016 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A0BM-11A 5 6 Out-of-frame Inter-chr q13.13 p12.3 128017 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A0BM-11A 3 10 3'UTR-3'UTR Intra-chr 128018 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A0BM-11A 2 6 Out-of-frame Intra-chr q11.22 q11.22 128019 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A1F6-11B 8 3 CDS-5'UTR Intra-chr q21.31 128020 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A1F6-11B 8 1 3'UTR-3'UTR Intra-chr 128021 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A1F6-11B 6 9 Out-of-frame Inter-chr q13.13 p12.3 128022 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A1F6-11B 6 9 Out-of-frame Inter-chr q13.13 p12.3 128023 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005213 - POLA1 chrX 24721386 + Exonic hg19 Non-Cancer TCGA-BH-A1F6-11B 7 0 Out-of-frame Inter-chr q11.2 p22.11 128024 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A1F6-11B 3 7 3'UTR-CDS Intra-chr p15.4 128025 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28152699 + Exonic hg19 Non-Cancer TCGA-BH-A1F6-11B 2 10 In-Frame Intra-chr p23.2 128026 ChimerSeq STARFusion TCGA RNA-Seq SAV1-GYPE SAV1 chr14 51131897 - GYPE chr4 144801662 - Exonic hg19 Non-Cancer TCGA-BH-A1F6-11B 4 0 In-Frame Inter-chr q22.1 q31.21 128027 ChimerSeq STARFusion TCGA RNA-Seq AFF3-C1D AFF3 chr2 100623094 - C1D chr2 68274451 - Exonic hg19 Non-Cancer TCGA-BH-A1F6-11B 2 1 CDS-5'UTR Intra-chr q11.2 Oncogene p14 128028 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-BH-A1F6-11B 2 1 3'UTR-5'UTR Intra-chr q12.1 128029 ChimerSeq STARFusion TCGA RNA-Seq MIR181A2HG-SCHIP1 MIR181A2HG chr9 127421020 + SCHIP1 chr3 159482232 + Exonic hg19 Non-Cancer TCGA-BH-A1F6-11B 2 0 5'UTR-5'UTR Inter-chr q33.3 q25.33 128030 ChimerSeq STARFusion TCGA RNA-Seq SPOP-SNRPA1 SPOP chr17 47753257 - SNRPA1 chr15 101827907 - Exonic hg19 Non-Cancer TCGA-BH-A1F6-11B 2 0 5'UTR-CDS Inter-chr q21.33 Oncogene Tumor suppressor gene q26.3 128031 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A1FM-11B 7 19 3'UTR-CDS Intra-chr p15.4 128032 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A1FM-11B 4 7 Out-of-frame Inter-chr q13.13 p12.3 128033 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-BH-A1FM-11B 4 5 CDS-5'UTR Intra-chr p23.2 128034 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A1FM-11B 3 7 Out-of-frame Inter-chr q13.13 p12.3 128035 ChimerSeq STARFusion TCGA RNA-Seq FAM185A-LRRC17 FAM185A chr7 102448798 + LRRC17 chr7 102574221 + Exonic hg19 Non-Cancer TCGA-BH-A1FM-11B 3 0 Out-of-frame Intra-chr q22.1 q22.1 128036 ChimerSeq STARFusion TCGA RNA-Seq SOCS5-LOC100134259 SOCS5 chr2 46926588 + LOC100134259 chr2 47083062 + Exonic hg19 Non-Cancer TCGA-BH-A1FM-11B 2 2 5'UTR-5'UTR Intra-chr p21 128037 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-BH-A1FM-11B 2 0 3'UTR-5'UTR Intra-chr q12.1 128038 ChimerSeq STARFusion TCGA RNA-Seq NOVA1-FAM156A NOVA1 chr14 27064616 - FAM156A chrX 52985544 - Exonic hg19 Non-Cancer TCGA-BH-A1FM-11B 2 0 CDS-5'UTR Inter-chr q12 p11.22 128039 ChimerSeq STARFusion TCGA RNA-Seq OXR1-SDC2 OXR1 chr8 107726213 + SDC2 chr8 97605708 + Exonic hg19 Non-Cancer TCGA-BH-A1FM-11B 2 0 In-Frame Intra-chr q23.1 q22.1 128040 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A0DQ-11A 8 24 Out-of-frame Intra-chr q11.22 q11.23 128041 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A0DQ-11A 8 16 Out-of-frame Intra-chr q11.22 q11.22 128042 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A0DQ-11A 7 3 Out-of-frame Inter-chr q13.13 p12.3 128043 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854180 - CBX3 chr7 26241365 + Exonic hg19 Non-Cancer TCGA-BH-A0DQ-11A 4 10 Out-of-frame Inter-chr q15.1 p15.2 128044 ChimerSeq STARFusion TCGA RNA-Seq U3-KCTD1 U3 chr18 24283356 - KCTD1 chr18 24081214 - Exonic hg19 Non-Cancer TCGA-BH-A0DQ-11A 3 14 Out-of-frame Intra-chr q11.2 128045 ChimerSeq STARFusion TCGA RNA-Seq U3-KCTD1 U3 chr18 24283356 - KCTD1 chr18 24161693 - Exonic hg19 Non-Cancer TCGA-BH-A0DQ-11A 2 14 Out-of-frame Intra-chr q11.2 128046 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-BH-A0DQ-11A 2 11 5'UTR-CDS Intra-chr q13.1 q13.1 128047 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A0DL-11A 8 1 CDS-5'UTR Intra-chr q21.31 128048 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A0DL-11A 8 1 3'UTR-3'UTR Intra-chr 128049 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A0DL-11A 5 7 3'UTR-CDS Intra-chr p15.4 128050 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-BH-A0DL-11A 4 6 CDS-5'UTR Intra-chr p23.2 128051 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A0DL-11A 4 3 Out-of-frame Inter-chr q13.13 p12.3 128052 ChimerSeq STARFusion TCGA RNA-Seq DCN-VIM DCN chr12 91545431 - VIM chr10 17278293 + Exonic hg19 Non-Cancer TCGA-BH-A0DL-11A 2 1 Out-of-frame Inter-chr q21.33 Tumor suppressor gene p13 Tumor suppressor gene 128053 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-BH-A0DL-11A 2 1 3'UTR-5'UTR Intra-chr q12.1 128054 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-BH-A0DL-11A 2 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128055 ChimerSeq STARFusion TCGA RNA-Seq ERICH1-DPYD ERICH1 chr8 618598 - DPYD chr1 97700550 - Exonic hg19 Non-Cancer TCGA-BH-A0DL-11A 2 0 In-Frame Inter-chr p21.3 Oncogene 128056 ChimerSeq STARFusion TCGA RNA-Seq RAD18-OXTR RAD18 chr3 8932073 - OXTR chr3 8794910 - Exonic hg19 Non-Cancer TCGA-BH-A0DL-11A 2 0 Out-of-frame Intra-chr p25.3 p25.3 128057 ChimerSeq STARFusion TCGA RNA-Seq ZBTB16-NNMT ZBTB16 chr11 114057760 + NNMT chr11 114168673 + Exonic hg19 Non-Cancer TCGA-BH-A0B5-11A 2 0 In-Frame Intra-chr q23.2 Tumor suppressor gene Transcription factor q23.2 128058 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677322 + IGLL5 chr22 23235961 + Exonic hg19 Non-Cancer TCGA-BH-A209-11A 8 213 Out-of-frame Intra-chr q11.22 128059 ChimerSeq STARFusion TCGA RNA-Seq MARVELD1-MEGF8 MARVELD1 chr10 99477355 + MEGF8 chr19 42854299 + Exonic hg19 Non-Cancer TCGA-BH-A209-11A 7 0 3'UTR-CDS Inter-chr q24.2 Tumor suppressor gene q13.2 128060 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-BH-A209-11A 2 15 5'UTR-CDS Intra-chr q13.1 q13.1 128061 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-BH-A209-11A 2 7 CDS-5'UTR Intra-chr p23.2 128062 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A209-11A 3 3 Out-of-frame Inter-chr q13.13 p12.3 128063 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A209-11A 2 3 3'UTR-CDS Intra-chr p15.4 128064 ChimerSeq STARFusion TCGA RNA-Seq GNG10-UGCG GNG10 chr9 114429226 + UGCG chr9 114676885 + Exonic hg19 Non-Cancer TCGA-BH-A209-11A 2 0 3'UTR-CDS Intra-chr q31.3 q31.3 128065 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-BH-A18U-11A 6 0 Out-of-frame Inter-chr q11.2 p22.11 128066 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A18U-11A 3 11 3'UTR-CDS Intra-chr p15.4 128067 ChimerSeq STARFusion TCGA RNA-Seq CHST9-AQP4 CHST9 chr18 24604080 - AQP4 chr18 24442560 - Exonic hg19 Non-Cancer TCGA-BH-A18U-11A 2 3 Out-of-frame Intra-chr q11.2 q11.2 128068 ChimerSeq STARFusion TCGA RNA-Seq NCOR2-UBC NCOR2 chr12 125051854 - UBC chr12 125398320 - Exonic hg19 Non-Cancer TCGA-BH-A18U-11A 2 1 5'UTR-5'UTR Intra-chr q24.31 q24.31 128069 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-E9-A1RB-11A 7 7 Out-of-frame Inter-chr q13.13 p12.3 128070 ChimerSeq STARFusion TCGA RNA-Seq TRPS1-RAD21 TRPS1 chr8 116599228 - RAD21 chr8 117869712 - Exonic hg19 Non-Cancer TCGA-E9-A1RB-11A 7 5 Out-of-frame Intra-chr q23.3 Transcription factor q24.11 128071 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-E9-A1RB-11A 3 6 3'UTR-CDS Intra-chr p15.4 128072 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-E9-A1RB-11A 2 7 CDS-5'UTR Intra-chr p23.2 128073 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-E9-A1RB-11A 2 6 5'UTR-CDS Intra-chr q13.1 q13.1 128074 ChimerSeq STARFusion TCGA RNA-Seq LOC728606-KCTD1 LOC728606 chr18 24283356 - KCTD1 chr18 24081214 - Exonic hg19 Non-Cancer TCGA-E9-A1RB-11A 2 4 3'UTR-CDS Intra-chr q11.2 128075 ChimerSeq STARFusion TCGA RNA-Seq LOC729852-GLCCI1 LOC729852 chr7 7841374 + GLCCI1 chr7 8043538 + Exonic hg19 Non-Cancer TCGA-E9-A1RB-11A 2 3 5'UTR-CDS Intra-chr p21.3 128076 ChimerSeq STARFusion TCGA RNA-Seq TRPS1-EIF3H TRPS1 chr8 116680772 - EIF3H chr8 117671219 - Exonic hg19 Non-Cancer TCGA-E9-A1RB-11A 2 1 5'UTR-CDS Intra-chr q23.3 Transcription factor q24.11 128077 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-BH-A0BA-11A 2 12 5'UTR-CDS Intra-chr q13.1 q13.1 128078 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A0BA-11A 3 1 Out-of-frame Inter-chr q13.13 p12.3 128079 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-BH-A0E0-11A 3 0 Out-of-frame Inter-chr q21 q13.42 128080 ChimerSeq STARFusion TCGA RNA-Seq RPS21-RPL3 RPS21 chr20 60962192 + RPL3 chr22 39714529 - Exonic hg19 Non-Cancer TCGA-BH-A0E0-11A 3 0 3'UTR-CDS Inter-chr q13.33 q13.1 128081 ChimerSeq STARFusion TCGA RNA-Seq DMD-HNRNPD DMD chrX 32305646 - HNRNPD chr4 83280792 - Exonic hg19 Non-Cancer TCGA-BH-A0E0-11A 2 0 In-Frame Inter-chr p21.1 Tumor suppressor gene q21.22 128082 ChimerSeq STARFusion TCGA RNA-Seq MRPL48-FLJ31306 MRPL48 chr11 73536841 + FLJ31306 chr14 58734111 - Exonic hg19 Non-Cancer TCGA-BH-A0E0-11A 2 0 CDS-3'UTR Inter-chr q13.4 128083 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A0E1-11A 3 3 3'UTR-CDS Intra-chr p15.4 128084 ChimerSeq STARFusion TCGA RNA-Seq IGSF5-PCP4 IGSF5 chr21 41165540 + PCP4 chr21 41270401 + Exonic hg19 Non-Cancer TCGA-BH-A0E1-11A 3 1 In-Frame Intra-chr q22.2 q22.2 128085 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-BH-A0E1-11A 2 1 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 128086 ChimerSeq STARFusion TCGA RNA-Seq SEC22B-ATP1A1 SEC22B chr1 145109684 + ATP1A1 chr1 116933404 + Exonic hg19 Non-Cancer TCGA-BH-A0E1-11A 2 0 In-Frame Intra-chr p12 p13.1 128087 ChimerSeq STARFusion TCGA RNA-Seq SPOP-SNRPA1 SPOP chr17 47753257 - SNRPA1 chr15 101827907 - Exonic hg19 Non-Cancer TCGA-BH-A0E1-11A 2 0 5'UTR-CDS Inter-chr q21.33 Oncogene Tumor suppressor gene q26.3 128088 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A0BT-11A 4 3 CDS-5'UTR Intra-chr q21.31 128089 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A0BT-11A 4 3 3'UTR-3'UTR Intra-chr 128090 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A0BT-11A 3 3 Out-of-frame Inter-chr q13.13 p12.3 128091 ChimerSeq STARFusion TCGA RNA-Seq MARVELD1-MEGF8 MARVELD1 chr10 99477356 + MEGF8 chr19 42854300 + Exonic hg19 Non-Cancer TCGA-BH-A0BT-11A 3 0 Out-of-frame Inter-chr q24.2 Tumor suppressor gene q13.2 128092 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-BH-A0BT-11A 2 1 CDS-5'UTR Intra-chr p23.2 128093 ChimerSeq STARFusion TCGA RNA-Seq IL1R1-SHC1 IL1R1 chr2 102770477 + SHC1 chr1 154942675 - Exonic hg19 Non-Cancer TCGA-BH-A0BT-11A 2 0 5'UTR-5'UTR Inter-chr q11.2 q21.3 128094 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-BH-A18Q-11A 5 14 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 128095 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-BH-A18Q-11A 2 21 5'UTR-CDS Intra-chr q13.1 q13.1 128096 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A18Q-11A 4 9 3'UTR-CDS Intra-chr p15.4 128097 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-BH-A18Q-11A 2 8 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128098 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A18Q-11A 3 2 Out-of-frame Inter-chr q13.13 p12.3 128099 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-BH-A18Q-11A 2 3 CDS-5'UTR Intra-chr p23.2 128100 ChimerSeq STARFusion TCGA RNA-Seq PFKFB3-LOC399715 PFKFB3 chr10 6268328 + LOC399715 chr10 6368509 + Exonic hg19 Non-Cancer TCGA-BH-A18Q-11A 2 1 CDS-5'UTR Intra-chr p15.1 128101 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-A7-A0DB-11A 3 5 Out-of-frame Intra-chr q11.22 q11.23 128102 ChimerSeq STARFusion TCGA RNA-Seq VPS33A-CLIP1 VPS33A chr12 122748119 - CLIP1 chr12 122758709 - Exonic hg19 Non-Cancer TCGA-BH-A1F2-11A 10 20 Out-of-frame Intra-chr q24.31 q24.31 128103 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A1F2-11A 12 2 CDS-5'UTR Intra-chr q21.31 128104 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A1F2-11A 12 2 3'UTR-3'UTR Intra-chr 128105 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A1F2-11A 7 10 Out-of-frame Inter-chr q13.13 p12.3 128106 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A1F2-11A 7 10 Out-of-frame Inter-chr q13.13 p12.3 128107 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A1F2-11A 6 12 3'UTR-CDS Intra-chr p15.4 128108 ChimerSeq STARFusion TCGA RNA-Seq SLC25A51-EXOSC3 SLC25A51 chr9 37899826 - EXOSC3 chr9 37784060 - Exonic hg19 Non-Cancer TCGA-BH-A1F2-11A 4 5 5'UTR-CDS Intra-chr p13.1 p13.2 128109 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-BH-A1F2-11A 3 5 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 128110 ChimerSeq STARFusion TCGA RNA-Seq FITM2-C20orf111 FITM2 chr20 42939616 - C20orf111 chr20 42835638 - Exonic hg19 Non-Cancer TCGA-BH-A1F2-11A 3 4 CDS-5'UTR Intra-chr q13.12 128111 ChimerSeq STARFusion TCGA RNA-Seq LOC729852-GLCCI1 LOC729852 chr7 7841374 + GLCCI1 chr7 8043538 + Exonic hg19 Non-Cancer TCGA-BH-A1F2-11A 2 7 5'UTR-CDS Intra-chr p21.3 128112 ChimerSeq STARFusion TCGA RNA-Seq LOC154761-FAM115A LOC154761 chr7 143533733 - FAM115A chr7 143560889 - Exonic hg19 Non-Cancer TCGA-BH-A1F2-11A 2 2 3'UTR-CDS Intra-chr 128113 ChimerSeq STARFusion TCGA RNA-Seq SOCS5-LOC100134259 SOCS5 chr2 46926588 + LOC100134259 chr2 47083062 + Exonic hg19 Non-Cancer TCGA-BH-A1F2-11A 2 1 5'UTR-5'UTR Intra-chr p21 128114 ChimerSeq STARFusion TCGA RNA-Seq ITPKB-LIMD1 ITPKB chr1 226923228 - LIMD1 chr3 45707142 + Exonic hg19 Non-Cancer TCGA-BH-A1F2-11A 2 0 Out-of-frame Inter-chr q42.12 p21.31 Tumor suppressor gene 128115 ChimerSeq STARFusion TCGA RNA-Seq YWHAE-CRK YWHAE chr17 1303341 - CRK chr17 1340449 - Exonic hg19 Non-Cancer TCGA-BH-A1F2-11A 2 0 In-Frame Intra-chr p13.3 p13.3 128116 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-A7-A13G-11A 2 5 CDS-5'UTR Intra-chr q21.31 128117 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-A7-A13G-11A 2 2 3'UTR-3'UTR Intra-chr 128118 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A0C0-11A 5 15 3'UTR-CDS Intra-chr p15.4 128119 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7876430 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A0C0-11A 2 15 3'UTR-CDS Intra-chr p15.4 128120 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A0C0-11A 3 5 Out-of-frame Inter-chr q13.13 p12.3 128121 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-BH-A0C0-11A 3 2 CDS-5'UTR Intra-chr p23.2 128122 ChimerSeq STARFusion TCGA RNA-Seq MATR3-SKP1 MATR3 chr5 138629494 + SKP1 chr5 133509713 - Exonic hg19 Non-Cancer TCGA-BH-A0C0-11A 2 1 5'UTR-5'UTR Intra-chr q31.2 q31.1 128123 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 Non-Cancer TCGA-BH-A0BS-11A 3 108 Out-of-frame Intra-chr q11.22 128124 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A0BS-11A 4 8 Out-of-frame Inter-chr q13.13 p12.3 128125 ChimerSeq STARFusion TCGA RNA-Seq LOC729852-GLCCI1 LOC729852 chr7 7841374 + GLCCI1 chr7 8043538 + Exonic hg19 Non-Cancer TCGA-BH-A0BS-11A 3 2 5'UTR-CDS Intra-chr p21.3 128126 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-BH-A0BS-11A 3 2 CDS-5'UTR Intra-chr p23.2 128127 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-E2-A15K-11A 5 9 3'UTR-3'UTR Intra-chr 128128 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677322 + IGLL5 chr22 23235961 + Exonic hg19 Non-Cancer TCGA-BH-A0DZ-11A 6 105 Out-of-frame Intra-chr q11.22 128129 ChimerSeq STARFusion TCGA RNA-Seq SOCS5-LOC100134259 SOCS5 chr2 46926588 + LOC100134259 chr2 47083062 + Exonic hg19 Non-Cancer TCGA-BH-A0DZ-11A 3 1 5'UTR-5'UTR Intra-chr p21 128130 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A1EU-11A 3 9 3'UTR-CDS Intra-chr p15.4 128131 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230305 - PZP chr12 9311059 - Exonic hg19 Non-Cancer TCGA-BH-A1EU-11A 4 4 Out-of-frame Intra-chr p13.31 p13.31 128132 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A1EU-11A 3 6 Out-of-frame Inter-chr q13.13 p12.3 128133 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-BH-A1EU-11A 2 3 CDS-5'UTR Intra-chr p23.2 128134 ChimerSeq STARFusion TCGA RNA-Seq DMXL1-SNX3 DMXL1 chr5 118433799 + SNX3 chr6 108535826 - Exonic hg19 Non-Cancer TCGA-BH-A1EU-11A 2 0 In-Frame Inter-chr q23.1 q21 128135 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A0HA-11A 7 9 3'UTR-CDS Intra-chr p15.4 128136 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A0HA-11A 3 6 Out-of-frame Inter-chr q13.13 p12.3 128137 ChimerSeq STARFusion TCGA RNA-Seq PFKFB3-LOC399715 PFKFB3 chr10 6268328 + LOC399715 chr10 6368509 + Exonic hg19 Non-Cancer TCGA-BH-A0HA-11A 2 7 CDS-5'UTR Intra-chr p15.1 128138 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-BH-A0HA-11A 2 4 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 128139 ChimerSeq STARFusion TCGA RNA-Seq LOC154761-FAM115A LOC154761 chr7 143533733 - FAM115A chr7 143560889 - Exonic hg19 Non-Cancer TCGA-BH-A0HA-11A 2 2 3'UTR-CDS Intra-chr 128140 ChimerSeq STARFusion TCGA RNA-Seq KIAA1598-ATXN10 KIAA1598 chr10 118661276 - ATXN10 chr22 46114293 + Exonic hg19 Non-Cancer TCGA-BH-A0HA-11A 2 0 Out-of-frame Inter-chr q13.31 128141 ChimerSeq STARFusion TCGA RNA-Seq SPECC1L-NELFCD SPECC1L chr22 24666951 + NELFCD chr20 57561148 + Exonic hg19 Non-Cancer TCGA-BH-A0H7-11A 8 13 Out-of-frame Inter-chr q11.23 q13.32 128142 ChimerSeq STARFusion TCGA RNA-Seq RTFDC1-TSHZ2 RTFDC1 chr20 55059245 + TSHZ2 chr20 52103683 + Exonic hg19 Non-Cancer TCGA-BH-A0H7-11A 5 21 Out-of-frame Intra-chr q13.31 q13.2 Transcription factor 128143 ChimerSeq STARFusion TCGA RNA-Seq C22orf29-DNTTIP1 C22orf29 chr22 19841966 - DNTTIP1 chr20 44437753 + Exonic hg19 Non-Cancer TCGA-BH-A0H7-11A 3 26 Out-of-frame Inter-chr q11.21 q13.12 Transcription factor 128144 ChimerSeq STARFusion TCGA RNA-Seq GNB1L-DNTTIP1 GNB1L chr22 19841966 - DNTTIP1 chr20 44437753 + Exonic hg19 Non-Cancer TCGA-BH-A0H7-11A 3 26 Out-of-frame Inter-chr q11.21 q13.12 Transcription factor 128145 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A0H7-11A 6 1 Out-of-frame Inter-chr q13.13 p12.3 128146 ChimerSeq STARFusion TCGA RNA-Seq VAPB-BCL2L1 VAPB chr20 56964573 + BCL2L1 chr20 30310151 - Exonic hg19 Non-Cancer TCGA-BH-A0H7-11A 3 11 5'UTR-5'UTR Intra-chr q13.32 q11.21 Oncogene 128147 ChimerSeq STARFusion TCGA RNA-Seq OSBPL2-ZNF70 OSBPL2 chr20 60838747 + ZNF70 chr22 24087406 - Exonic hg19 Non-Cancer TCGA-BH-A0H7-11A 4 4 CDS-5'UTR Inter-chr q13.33 q11.23 Transcription factor 128148 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A0H7-11A 4 1 CDS-5'UTR Intra-chr q21.31 128149 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BH-A0H7-11A 4 1 3'UTR-3'UTR Intra-chr 128150 ChimerSeq STARFusion TCGA RNA-Seq STIM1-HOMEZ STIM1 chr11 4045217 + HOMEZ chr14 23746396 - Exonic hg19 Non-Cancer TCGA-BH-A0H7-11A 3 5 In-Frame Inter-chr p15.4 q11.2 Transcription factor 128151 ChimerSeq STARFusion TCGA RNA-Seq USP34-GKN1 USP34 chr2 61483519 - GKN1 chr2 69204627 + Exonic hg19 Non-Cancer TCGA-BH-A0H7-11A 3 2 Out-of-frame Intra-chr p15 p13.3 Tumor suppressor gene 128152 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44648235 - Exonic hg19 Non-Cancer TCGA-BH-A0H7-11A 3 1 CDS-5'UTR Intra-chr q21.31 128153 ChimerSeq STARFusion TCGA RNA-Seq PARN-MYO18A PARN chr16 14700341 - MYO18A chr17 27419474 - Exonic hg19 Non-Cancer TCGA-BH-A0H7-11A 2 3 In-Frame Inter-chr q11.2 Oncogene 128154 ChimerSeq STARFusion TCGA RNA-Seq WDR61-APOD WDR61 chr15 78591904 - APOD chr3 195306366 - Exonic hg19 Non-Cancer TCGA-BH-A0H7-11A 2 0 5'UTR-5'UTR Inter-chr q25.1 q29 128155 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A0BV-11A 10 27 Out-of-frame Intra-chr q11.22 q11.23 128156 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-BH-A0BV-11A 15 0 Out-of-frame Inter-chr q21 q13.42 128157 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A0BV-11A 10 16 Out-of-frame Intra-chr q11.22 q11.22 128158 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A0BV-11A 5 4 Out-of-frame Inter-chr q13.13 p12.3 128159 ChimerSeq STARFusion TCGA RNA-Seq PRSS27-TPSAB1 PRSS27 chr16 2763530 - TPSAB1 chr16 1292077 + Exonic hg19 Non-Cancer TCGA-BH-A0BV-11A 4 8 Out-of-frame Intra-chr p13.3 p13.3 128160 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-BH-A0BV-11A 2 10 5'UTR-CDS Intra-chr q13.1 q13.1 128161 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677322 + IGLL5 chr22 23235961 + Exonic hg19 Non-Cancer TCGA-BH-A0DG-11A 3 234 Out-of-frame Intra-chr q11.22 128162 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-BH-A0DG-11A 2 24 5'UTR-CDS Intra-chr q13.1 q13.1 128163 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-BH-A0DG-11A 5 1 CDS-3'UTR Intra-chr q11.22 q22.2 128164 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A0DG-11A 3 5 Out-of-frame Inter-chr q13.13 p12.3 128165 ChimerSeq STARFusion TCGA RNA-Seq LOC154761-FAM115A LOC154761 chr7 143533733 - FAM115A chr7 143560889 - Exonic hg19 Non-Cancer TCGA-BH-A0DG-11A 3 4 3'UTR-CDS Intra-chr 128166 ChimerSeq STARFusion TCGA RNA-Seq HIC2-PI4KAP2 HIC2 chr22 21797146 + PI4KAP2 chr22 21838423 - Exonic hg19 Non-Cancer TCGA-BH-A0DG-11A 3 0 CDS-3'UTR Intra-chr q11.21 Transcription factor q11.21 128167 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-BH-A0DG-11A 2 3 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 128168 ChimerSeq STARFusion TCGA RNA-Seq PRKCH-FLJ22447 PRKCH chr14 61997313 + FLJ22447 chr14 62117680 + Exonic hg19 Non-Cancer TCGA-BH-A0DG-11A 2 1 CDS-5'UTR Intra-chr q23.1 q23.1 128169 ChimerSeq STARFusion TCGA RNA-Seq PARD3-NRP1 PARD3 chr10 34805907 - NRP1 chr10 33559784 - Exonic hg19 Non-Cancer TCGA-BH-A0DG-11A 2 0 Out-of-frame Intra-chr p11.21 p11.22 128170 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-E2-A1IG-11A 10 27 Out-of-frame Intra-chr q11.22 q11.23 128171 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-E2-A1IG-11A 10 16 Out-of-frame Intra-chr q11.22 q11.22 128172 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A0DV-11A 10 46 Out-of-frame Intra-chr q11.22 q11.23 128173 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BH-A0DV-11A 10 28 Out-of-frame Intra-chr q11.22 q11.22 128174 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-BH-A0DV-11A 15 0 Out-of-frame Inter-chr q21 q13.42 128175 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BH-A0DV-11A 6 8 Out-of-frame Inter-chr q13.13 p12.3 128176 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BH-A0DV-11A 6 7 Out-of-frame Inter-chr q13.13 p12.3 128177 ChimerSeq STARFusion TCGA RNA-Seq U3-KCTD1 U3 chr18 24283356 - KCTD1 chr18 24161693 - Exonic hg19 Non-Cancer TCGA-BH-A0DV-11A 3 16 Out-of-frame Intra-chr q11.2 128178 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-BH-A0DV-11A 2 9 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 128179 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 Non-Cancer TCGA-BH-A1FB-11A 8 215 Out-of-frame Intra-chr q11.22 128180 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854180 - CBX3 chr7 26241365 + Exonic hg19 Non-Cancer TCGA-BH-A1FB-11A 4 10 Out-of-frame Inter-chr q15.1 p15.2 128181 ChimerSeq STARFusion TCGA RNA-Seq LOC729852-GLCCI1 LOC729852 chr7 7841374 + GLCCI1 chr7 8043538 + Exonic hg19 Non-Cancer TCGA-BH-A1FB-11A 3 3 5'UTR-CDS Intra-chr p21.3 128182 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-BH-A1FB-11A 2 2 3'UTR-CDS Intra-chr p15.4 128183 ChimerSeq STARFusion TCGA RNA-Seq TTTY15-ATP1A2 TTTY15 chrY 14802118 + ATP1A2 chr1 160112616 + Exonic hg19 Non-Cancer TCGA-GI-A2C8-11A 3 2 Out-of-frame Inter-chr q11.221 q23.2 128184 ChimerSeq STARFusion TCGA RNA-Seq SPARC-MB SPARC chr5 151045922 - MB chr22 36007153 - Exonic hg19 Non-Cancer TCGA-GI-A2C8-11A 2 3 In-Frame Inter-chr q33.1 Tumor suppressor gene q12.3 128185 ChimerSeq STARFusion TCGA RNA-Seq NCOA7-TRMT11 NCOA7 chr6 126176386 + TRMT11 chr6 126319199 + Exonic hg19 Non-Cancer TCGA-HM-A3JJ-11A 3 27 Out-of-frame Intra-chr q22.31 q22.32 128186 ChimerSeq STARFusion TCGA RNA-Seq NCOA7-TRMT11 NCOA7 chr6 126176386 + TRMT11 chr6 126319369 + Exonic hg19 Non-Cancer TCGA-HM-A3JJ-11A 2 27 Out-of-frame Intra-chr q22.31 q22.32 128187 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-HM-A3JJ-11A 5 3 Out-of-frame Inter-chr q13.13 p12.3 128188 ChimerSeq STARFusion TCGA RNA-Seq UBA52-UBC UBA52 chr19 18685753 + UBC chr12 125398143 - Exonic hg19 Non-Cancer TCGA-FU-A3EO-11A 7 4 Out-of-frame Inter-chr p13.11 q24.31 128189 ChimerSeq STARFusion TCGA RNA-Seq MARVELD1-MEGF8 MARVELD1 chr10 99477355 + MEGF8 chr19 42854299 + Exonic hg19 Non-Cancer TCGA-FU-A3EO-11A 7 0 3'UTR-CDS Inter-chr q24.2 Tumor suppressor gene q13.2 128190 ChimerSeq STARFusion TCGA RNA-Seq UBA52-UBC UBA52 chr19 18685759 + UBC chr12 125398137 - Exonic hg19 Non-Cancer TCGA-FU-A3EO-11A 5 4 Out-of-frame Inter-chr p13.11 q24.31 128191 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-FU-A3EO-11A 3 4 CDS-5'UTR Intra-chr p23.2 128192 ChimerSeq STARFusion TCGA RNA-Seq FTCD-ITIH4 FTCD chr21 47575384 - ITIH4 chr3 52852299 - Exonic hg19 Non-Cancer TCGA-W5-AA30-11A 2 1 Out-of-frame Inter-chr p21.1 128193 ChimerSeq STARFusion TCGA RNA-Seq CLEC10A-ASGR2 CLEC10A chr17 6981301 - ASGR2 chr17 7011876 - Exonic hg19 Non-Cancer TCGA-W5-AA2X-11A 11 1 Out-of-frame Intra-chr p13.1 p13.1 128194 ChimerSeq STARFusion TCGA RNA-Seq CLEC10A-ASGR2 CLEC10A chr17 6981301 - ASGR2 chr17 7011876 - Exonic hg19 Non-Cancer TCGA-W5-AA2R-11A 21 0 Out-of-frame Intra-chr p13.1 p13.1 128195 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 Non-Cancer TCGA-A6-2686-11A 6 334 Out-of-frame Intra-chr q11.22 128196 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677322 + IGLL5 chr22 23235961 + Exonic hg19 Non-Cancer TCGA-AA-3518-11A 10 539 Out-of-frame Intra-chr q11.22 128197 ChimerSeq STARFusion TCGA RNA-Seq TFG-GPR128 TFG chr3 100438902 + GPR128 chr3 100348442 + Exonic hg19 Non-Cancer TCGA-AA-3518-11A 17 38 In-Frame Intra-chr q12.2 128198 ChimerSeq STARFusion TCGA RNA-Seq RNA45S5-FTH1 RNA45S5 chrUn_gl000220 115490 + FTH1 chr11 61734921 - Exonic hg19 Non-Cancer TCGA-AA-3518-11A 3 25 Out-of-frame Inter-chr q12.3 128199 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 Non-Cancer TCGA-AA-3517-11A 4 256 Out-of-frame Intra-chr q11.22 128200 ChimerSeq STARFusion TCGA RNA-Seq IGJ-FGF23 IGJ chr4 71521266 - FGF23 chr12 4479175 - Exonic hg19 Non-Cancer TCGA-AA-3517-11A 4 0 Out-of-frame Inter-chr p13.32 128201 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677322 + IGLL5 chr22 23235961 + Exonic hg19 Non-Cancer TCGA-AA-3522-11A 25 443 Out-of-frame Intra-chr q11.22 128202 ChimerSeq STARFusion TCGA RNA-Seq RNA45S5-FTH1 RNA45S5 chrUn_gl000220 115492 + FTH1 chr11 61734919 - Exonic hg19 Non-Cancer TCGA-AA-3522-11A 9 56 Out-of-frame Inter-chr q12.3 128203 ChimerSeq STARFusion TCGA RNA-Seq RNA45S5-FTH1 RNA45S5 chrUn_gl000220 115490 + FTH1 chr11 61734921 - Exonic hg19 Non-Cancer TCGA-F4-6704-11A 3 13 Out-of-frame Inter-chr q12.3 128204 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-F4-6704-11A 3 4 CDS-5'UTR Intra-chr q21.31 128205 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-F4-6704-11A 3 2 3'UTR-3'UTR Intra-chr 128206 ChimerSeq STARFusion TCGA RNA-Seq FLNA-IGH@ FLNA chrX 153577916 - IGH@ chr14 106054729 - Exonic hg19 Non-Cancer TCGA-AA-3511-11A 15 3 Out-of-frame Inter-chr q28 Tumor suppressor gene 32.33 128207 ChimerSeq STARFusion TCGA RNA-Seq FLNA-IGH@ FLNA chrX 153577916 - IGH@ chr14 106174999 - Exonic hg19 Non-Cancer TCGA-AA-3511-11A 11 3 Out-of-frame Inter-chr q28 Tumor suppressor gene 32.33 128208 ChimerSeq STARFusion TCGA RNA-Seq FLNA-IGHA1 FLNA chrX 153577916 - IGHA1 chr14 106174999 - Exonic hg19 Non-Cancer TCGA-AA-3511-11A 11 2 Out-of-frame Inter-chr q28 Tumor suppressor gene 128209 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-AA-3511-11A 3 17 Out-of-frame Intra-chr q11.22 q11.23 128210 ChimerSeq STARFusion TCGA RNA-Seq NRBP1-IGH@ NRBP1 chr2 27664675 + IGH@ chr14 106175003 - Exonic hg19 Non-Cancer TCGA-AA-3511-11A 5 2 Out-of-frame Inter-chr p23.3 Other:NRBP Tumor suppressor gene 32.33 128211 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-AA-3511-11A 3 10 Out-of-frame Intra-chr q11.22 q11.22 128212 ChimerSeq STARFusion TCGA RNA-Seq IGH@-ZYX IGH@ chr14 106054423 - ZYX chr7 143088137 + Exonic hg19 Non-Cancer TCGA-AA-3511-11A 3 4 Out-of-frame Inter-chr 32.33 q34 Tumor suppressor gene 128213 ChimerSeq STARFusion TCGA RNA-Seq IGHA2-ZYX IGHA2 chr14 106054423 - ZYX chr7 143088137 + Exonic hg19 Non-Cancer TCGA-AA-3511-11A 3 4 Out-of-frame Inter-chr q34 Tumor suppressor gene 128214 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 Non-Cancer TCGA-A6-2679-11A 3 779 Out-of-frame Intra-chr q11.22 128215 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677322 + IGLL5 chr22 23235961 + Exonic hg19 Non-Cancer TCGA-AA-3514-11A 18 566 Out-of-frame Intra-chr q11.22 128216 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-AA-3514-11A 10 0 Out-of-frame Inter-chr q11.2 p22.11 128217 ChimerSeq STARFusion TCGA RNA-Seq NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer TCGA-A6-2680-11A 7 6 Out-of-frame Intra-chr p11.2 128218 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 Non-Cancer TCGA-AA-3663-11A 4 419 Out-of-frame Intra-chr q11.22 128219 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005213 - POLA1 chrX 24721386 + Exonic hg19 Non-Cancer TCGA-AA-3663-11A 3 0 Out-of-frame Inter-chr q11.2 p22.11 128220 ChimerSeq STARFusion TCGA RNA-Seq TPM2-ACTG1 TPM2 chr9 35685061 - ACTG1 chr17 79478652 - Exonic hg19 Non-Cancer TCGA-AA-3663-11A 2 2 In-Frame Inter-chr p13.3 q25.3 128221 ChimerSeq STARFusion TCGA RNA-Seq SOCS5-LOC100134259 SOCS5 chr2 46926588 + LOC100134259 chr2 47083062 + Exonic hg19 Non-Cancer TCGA-AA-3663-11A 2 1 5'UTR-5'UTR Intra-chr p21 128222 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 Non-Cancer TCGA-A6-2671-11A 16 285 Out-of-frame Intra-chr q11.22 128223 ChimerSeq STARFusion TCGA RNA-Seq RNA45S5-FTH1 RNA45S5 chrUn_gl000220 115490 + FTH1 chr11 61734921 - Exonic hg19 Non-Cancer TCGA-A6-2671-11A 5 82 Out-of-frame Inter-chr q12.3 128224 ChimerSeq STARFusion TCGA RNA-Seq RNA45S5-EIF1 RNA45S5 chrUn_gl000220 115490 + EIF1 chr17 39845243 + Exonic hg19 Non-Cancer TCGA-A6-2671-11A 3 3 Out-of-frame Inter-chr q21.2 128225 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677322 + IGLL5 chr22 23235961 + Exonic hg19 Non-Cancer TCGA-A6-2675-11A 3 129 Out-of-frame Intra-chr q11.22 128226 ChimerSeq STARFusion TCGA RNA-Seq RNA45S5-FTH1 RNA45S5 chrUn_gl000220 115490 + FTH1 chr11 61734921 - Exonic hg19 Non-Cancer TCGA-A6-2675-11A 11 14 Out-of-frame Inter-chr q12.3 128227 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGH@ STK25 chr2 242434915 - IGH@ chr14 106054734 - Exonic hg19 Non-Cancer TCGA-A6-2682-11A 456 1 Out-of-frame Inter-chr q37.3 32.33 128228 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGH@ STK25 chr2 242434915 - IGH@ chr14 106175004 - Exonic hg19 Non-Cancer TCGA-A6-2682-11A 212 1 Out-of-frame Inter-chr q37.3 32.33 128229 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGHA1 STK25 chr2 242434915 - IGHA1 chr14 106175004 - Exonic hg19 Non-Cancer TCGA-A6-2682-11A 212 1 Out-of-frame Inter-chr q37.3 128230 ChimerSeq STARFusion TCGA RNA-Seq PLCXD1-IGHA2 PLCXD1 chrX 209756 + IGHA2 chr14 106054734 - Exonic hg19 Non-Cancer TCGA-A6-2682-11A 62 0 Out-of-frame Inter-chr p22.33 128231 ChimerSeq STARFusion TCGA RNA-Seq HCFC1-IGHA2 HCFC1 chrX 153222118 - IGHA2 chr14 106054731 - Exonic hg19 Non-Cancer TCGA-A6-2682-11A 56 0 Out-of-frame Inter-chr q28 128232 ChimerSeq STARFusion TCGA RNA-Seq FLNA-IGHA2 FLNA chrX 153577916 - IGHA2 chr14 106054729 - Exonic hg19 Non-Cancer TCGA-A6-2682-11A 28 4 Out-of-frame Inter-chr q28 Tumor suppressor gene 128233 ChimerSeq STARFusion TCGA RNA-Seq IGHA2-ZYX IGHA2 chr14 106054423 - ZYX chr7 143088137 + Exonic hg19 Non-Cancer TCGA-A6-2682-11A 27 3 Out-of-frame Inter-chr q34 Tumor suppressor gene 128234 ChimerSeq STARFusion TCGA RNA-Seq PLCXD1-IGHA2 PLCXD1 chrY 159756 + IGHA2 chr14 106054734 - Exonic hg19 Non-Cancer TCGA-A6-2682-11A 27 0 Out-of-frame Inter-chr p22.33 128235 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-A6-2682-11A 4 15 Out-of-frame Intra-chr q11.22 q11.23 128236 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-A6-2682-11A 4 11 Out-of-frame Intra-chr q11.22 q11.22 128237 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-A6-2682-11A 3 12 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128238 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677322 + IGLL5 chr22 23235961 + Exonic hg19 Non-Cancer TCGA-AA-3520-11A 23 476 Out-of-frame Intra-chr q11.22 128239 ChimerSeq STARFusion TCGA RNA-Seq RNA45S5-FTH1 RNA45S5 chrUn_gl000220 115490 + FTH1 chr11 61734921 - Exonic hg19 Non-Cancer TCGA-AZ-6598-11A 3 9 Out-of-frame Inter-chr q12.3 128240 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677313 + IGLL5 chr22 23235955 + Exonic hg19 Non-Cancer TCGA-AA-3516-11A 6 255 Out-of-frame Intra-chr q11.22 128241 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677321 + IGLL5 chr22 23235957 + Exonic hg19 Non-Cancer TCGA-AA-3516-11A 3 255 Out-of-frame Intra-chr q11.22 128242 ChimerSeq STARFusion TCGA RNA-Seq RNA45S5-FTH1 RNA45S5 chrUn_gl000220 115492 + FTH1 chr11 61734919 - Exonic hg19 Non-Cancer TCGA-AA-3516-11A 8 30 Out-of-frame Inter-chr q12.3 128243 ChimerSeq STARFusion TCGA RNA-Seq RNA45S5-FTH1 RNA45S5 chrUn_gl000220 114142 + FTH1 chr11 61734928 - Exonic hg19 Non-Cancer TCGA-AA-3516-11A 3 30 Out-of-frame Inter-chr q12.3 128244 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-AA-3516-11A 2 6 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128245 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677322 + IGLL5 chr22 23235961 + Exonic hg19 Non-Cancer TCGA-AA-3697-11A 3 211 Out-of-frame Intra-chr q11.22 128246 ChimerSeq STARFusion TCGA RNA-Seq EDARADD-ENO1 EDARADD chr1 236647127 + ENO1 chr1 8926377 - Exonic hg19 Non-Cancer TCGA-AA-3697-11A 4 5 Out-of-frame Intra-chr q42.3 p36.23 128247 ChimerSeq STARFusion TCGA RNA-Seq RNA45S5-FTH1 RNA45S5 chrUn_gl000220 115492 + FTH1 chr11 61734919 - Exonic hg19 Non-Cancer TCGA-AA-3697-11A 3 2 Out-of-frame Inter-chr q12.3 128248 ChimerSeq STARFusion TCGA RNA-Seq PDE6B-PPP2R2D PDE6B chr4 619882 + PPP2R2D chr10 133747960 + Exonic hg19 Non-Cancer TCGA-A6-2685-11A 18 0 Out-of-frame Inter-chr p16.3 q26.3 128249 ChimerSeq STARFusion TCGA RNA-Seq FLNA-IGH@ FLNA chrX 153577916 - IGH@ chr14 106054729 - Exonic hg19 Non-Cancer TCGA-A6-2685-11A 13 8 Out-of-frame Inter-chr q28 Tumor suppressor gene 32.33 128250 ChimerSeq STARFusion TCGA RNA-Seq FLNA-IGHA2 FLNA chrX 153577916 - IGHA2 chr14 106054729 - Exonic hg19 Non-Cancer TCGA-A6-2685-11A 13 4 Out-of-frame Inter-chr q28 Tumor suppressor gene 128251 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-A6-2685-11A 3 16 Out-of-frame Intra-chr q11.22 q11.23 128252 ChimerSeq STARFusion TCGA RNA-Seq FLNA-IGH@ FLNA chrX 153577916 - IGH@ chr14 106174999 - Exonic hg19 Non-Cancer TCGA-A6-2685-11A 5 6 Out-of-frame Inter-chr q28 Tumor suppressor gene 32.33 128253 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-A6-2685-11A 3 14 Out-of-frame Intra-chr q11.22 q11.22 128254 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGH@ STK25 chr2 242434915 - IGH@ chr14 106054734 - Exonic hg19 Non-Cancer TCGA-AA-3525-11A 460 0 Out-of-frame Inter-chr q37.3 32.33 128255 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGHA2 STK25 chr2 242434915 - IGHA2 chr14 106054734 - Exonic hg19 Non-Cancer TCGA-AA-3525-11A 460 0 Out-of-frame Inter-chr q37.3 128256 ChimerSeq STARFusion TCGA RNA-Seq DHRSX-IGH@ DHRSX chrX 2184826 - IGH@ chr14 106175000 - Exonic hg19 Non-Cancer TCGA-AA-3525-11A 258 0 Out-of-frame Inter-chr p22.33 32.33 128257 ChimerSeq STARFusion TCGA RNA-Seq DHRSX-IGHA1 DHRSX chrX 2184826 - IGHA1 chr14 106175000 - Exonic hg19 Non-Cancer TCGA-AA-3525-11A 258 0 Out-of-frame Inter-chr p22.33 128258 ChimerSeq STARFusion TCGA RNA-Seq DHRSX-IGHA1 DHRSX chrY 2134826 - IGHA1 chr14 106175000 - Exonic hg19 Non-Cancer TCGA-AA-3525-11A 70 0 Out-of-frame Inter-chr p22.33 128259 ChimerSeq STARFusion TCGA RNA-Seq HCFC1-IGHA2 HCFC1 chrX 153222119 - IGHA2 chr14 106054732 - Exonic hg19 Non-Cancer TCGA-AA-3525-11A 45 1 Out-of-frame Inter-chr q28 128260 ChimerSeq STARFusion TCGA RNA-Seq IGHA2-ZYX IGHA2 chr14 106054423 - ZYX chr7 143088137 + Exonic hg19 Non-Cancer TCGA-AA-3525-11A 29 1 Out-of-frame Inter-chr q34 Tumor suppressor gene 128261 ChimerSeq STARFusion TCGA RNA-Seq TFG-GPR128 TFG chr3 100438902 + GPR128 chr3 100348442 + Exonic hg19 Non-Cancer TCGA-AA-3525-11A 16 34 In-Frame Intra-chr q12.2 128262 ChimerSeq STARFusion TCGA RNA-Seq FLNA-IGHA1 FLNA chrX 153577921 - IGHA1 chr14 106175004 - Exonic hg19 Non-Cancer TCGA-AA-3525-11A 24 1 Out-of-frame Inter-chr q28 Tumor suppressor gene 128263 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-AA-3525-11A 6 8 3'UTR-3'UTR Intra-chr 128264 ChimerSeq STARFusion TCGA RNA-Seq RPS4X-IGL@ RPS4X chrX 71493642 - IGL@ chr22 23247173 + Exonic hg19 Non-Cancer TCGA-AA-3525-11A 5 1 Out-of-frame Inter-chr q13.1 q11.22 128265 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677322 + IGLL5 chr22 23235961 + Exonic hg19 Non-Cancer TCGA-AA-3655-11A 3 281 Out-of-frame Intra-chr q11.22 128266 ChimerSeq STARFusion TCGA RNA-Seq UBA52-UBC UBA52 chr19 18685759 + UBC chr12 125398137 - Exonic hg19 Non-Cancer TCGA-AA-3655-11A 3 2 Out-of-frame Inter-chr p13.11 q24.31 128267 ChimerSeq STARFusion TCGA RNA-Seq LGR4-TMSB4X LGR4 chr11 27389674 - TMSB4X chrX 12994436 + Exonic hg19 Non-Cancer TCGA-AA-3660-11A 7 1 Out-of-frame Inter-chr p14.1 p22.2 128268 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-AA-3660-11A 6 0 Out-of-frame Inter-chr q11.2 p22.11 128269 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGH@ STK25 chr2 242434915 - IGH@ chr14 106054734 - Exonic hg19 Non-Cancer TCGA-AA-3713-11A 106 1 Out-of-frame Inter-chr q37.3 32.33 128270 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005213 - POLA1 chrX 24721386 + Exonic hg19 Non-Cancer TCGA-AA-3713-11A 9 0 Out-of-frame Inter-chr q11.2 p22.11 128271 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-AA-3713-11A 3 19 Out-of-frame Intra-chr q11.22 q11.23 128272 ChimerSeq STARFusion TCGA RNA-Seq IGH@-ZYX IGH@ chr14 106054423 - ZYX chr7 143088137 + Exonic hg19 Non-Cancer TCGA-AA-3713-11A 5 1 Out-of-frame Inter-chr 32.33 q34 Tumor suppressor gene 128273 ChimerSeq STARFusion TCGA RNA-Seq IGHA2-ZYX IGHA2 chr14 106054423 - ZYX chr7 143088137 + Exonic hg19 Non-Cancer TCGA-AA-3713-11A 5 1 Out-of-frame Inter-chr q34 Tumor suppressor gene 128274 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-AA-3713-11A 3 9 Out-of-frame Intra-chr q11.22 q11.22 128275 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 Non-Cancer TCGA-AA-3712-11A 10 343 Out-of-frame Intra-chr q11.22 128276 ChimerSeq STARFusion TCGA RNA-Seq RNA45S5-FTH1 RNA45S5 chrUn_gl000220 115492 + FTH1 chr11 61734919 - Exonic hg19 Non-Cancer TCGA-AZ-6601-11A 5 17 Out-of-frame Inter-chr q12.3 128277 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005213 - POLA1 chrX 24721386 + Exonic hg19 Non-Cancer TCGA-AZ-6601-11A 5 0 Out-of-frame Inter-chr q11.2 p22.11 128278 ChimerSeq STARFusion TCGA RNA-Seq FLNA-IGH@ FLNA chrX 153577921 - IGH@ chr14 106054734 - Exonic hg19 Non-Cancer TCGA-A6-5662-11A 9 4 Out-of-frame Inter-chr q28 Tumor suppressor gene 32.33 128279 ChimerSeq STARFusion TCGA RNA-Seq FLNA-IGHA2 FLNA chrX 153577921 - IGHA2 chr14 106054734 - Exonic hg19 Non-Cancer TCGA-A6-5662-11A 9 1 Out-of-frame Inter-chr q28 Tumor suppressor gene 128280 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 Non-Cancer TCGA-AZ-6600-11A 3 559 Out-of-frame Intra-chr q11.22 128281 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 Non-Cancer TCGA-AA-3527-11A 18 405 Out-of-frame Intra-chr q11.22 128282 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005213 - POLA1 chrX 24721386 + Exonic hg19 Non-Cancer TCGA-AA-3527-11A 10 0 Out-of-frame Inter-chr q11.2 p22.11 128283 ChimerSeq STARFusion TCGA RNA-Seq RNA45S5-FTH1 RNA45S5 chrUn_gl000220 115490 + FTH1 chr11 61734921 - Exonic hg19 Non-Cancer TCGA-AA-3527-11A 3 25 Out-of-frame Inter-chr q12.3 128284 ChimerSeq STARFusion TCGA RNA-Seq TMEM45B-PRSS3 TMEM45B chr11 129685793 + PRSS3 chr9 33796641 + Exonic hg19 Non-Cancer TCGA-AA-3527-11A 3 1 5'UTR-CDS Inter-chr q24.3 p13.3 128285 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005213 - POLA1 chrX 24721386 + Exonic hg19 Non-Cancer TCGA-A6-2683-11A 5 0 Out-of-frame Inter-chr q11.2 p22.11 128286 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-A6-2683-11A 2 3 CDS-5'UTR Intra-chr p23.2 128287 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677322 + IGLL5 chr22 23235961 + Exonic hg19 Non-Cancer TCGA-A6-2678-11A 8 288 Out-of-frame Intra-chr q11.22 128288 ChimerSeq STARFusion TCGA RNA-Seq FCGBP-SIAE FCGBP chr19 40384568 - SIAE chr11 124517340 - Exonic hg19 Non-Cancer TCGA-A6-2678-11A 7 1 Out-of-frame Inter-chr q24.2 128289 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-A6-2678-11A 6 0 Out-of-frame Inter-chr q11.2 p22.11 128290 ChimerSeq STARFusion TCGA RNA-Seq PLCXD1-IGH@ PLCXD1 chrX 209756 + IGH@ chr14 106054734 - Exonic hg19 Non-Cancer TCGA-AA-3534-11A 32 0 Out-of-frame Inter-chr p22.33 32.33 128291 ChimerSeq STARFusion TCGA RNA-Seq PLCXD1-IGHA2 PLCXD1 chrX 209756 + IGHA2 chr14 106054734 - Exonic hg19 Non-Cancer TCGA-AA-3534-11A 32 0 Out-of-frame Inter-chr p22.33 128292 ChimerSeq STARFusion TCGA RNA-Seq IGH@-ZYX IGH@ chr14 106054423 - ZYX chr7 143088137 + Exonic hg19 Non-Cancer TCGA-AA-3534-11A 22 2 Out-of-frame Inter-chr 32.33 q34 Tumor suppressor gene 128293 ChimerSeq STARFusion TCGA RNA-Seq IGHA2-ZYX IGHA2 chr14 106054423 - ZYX chr7 143088137 + Exonic hg19 Non-Cancer TCGA-AA-3534-11A 22 2 Out-of-frame Inter-chr q34 Tumor suppressor gene 128294 ChimerSeq STARFusion TCGA RNA-Seq CD44-IGH@ CD44 chr11 35160917 + IGH@ chr14 106173768 - Exonic hg19 Non-Cancer TCGA-AA-3534-11A 5 37 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene 32.33 128295 ChimerSeq STARFusion TCGA RNA-Seq CD44-IGHA1 CD44 chr11 35160917 + IGHA1 chr14 106173768 - Exonic hg19 Non-Cancer TCGA-AA-3534-11A 5 37 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene 128296 ChimerSeq STARFusion TCGA RNA-Seq PLCXD1-IGH@ PLCXD1 chrX 209756 + IGH@ chr14 106175004 - Exonic hg19 Non-Cancer TCGA-AA-3534-11A 14 0 Out-of-frame Inter-chr p22.33 32.33 128297 ChimerSeq STARFusion TCGA RNA-Seq PLCXD1-IGH@ PLCXD1 chrY 159756 + IGH@ chr14 106054734 - Exonic hg19 Non-Cancer TCGA-AA-3534-11A 12 0 Out-of-frame Inter-chr p22.33 32.33 128298 ChimerSeq STARFusion TCGA RNA-Seq PLCXD1-IGHA2 PLCXD1 chrY 159756 + IGHA2 chr14 106054734 - Exonic hg19 Non-Cancer TCGA-AA-3534-11A 12 0 Out-of-frame Inter-chr p22.33 128299 ChimerSeq STARFusion TCGA RNA-Seq GAS6-IGH@ GAS6 chr13 114525072 - IGH@ chr14 106175004 - Exonic hg19 Non-Cancer TCGA-AA-3534-11A 11 2 Out-of-frame Inter-chr q34 Oncogene 32.33 128300 ChimerSeq STARFusion TCGA RNA-Seq GAS6-IGHA1 GAS6 chr13 114525072 - IGHA1 chr14 106175004 - Exonic hg19 Non-Cancer TCGA-AA-3534-11A 11 0 Out-of-frame Inter-chr q34 Oncogene 128301 ChimerSeq STARFusion TCGA RNA-Seq DCHS1-IGKC DCHS1 chr11 6662137 - IGKC chr2 89161070 - Exonic hg19 Non-Cancer TCGA-AA-3534-11A 7 1 Out-of-frame Inter-chr p15.4 p11.2 128302 ChimerSeq STARFusion TCGA RNA-Seq RNA45S5-FTH1 RNA45S5 chrUn_gl000220 115492 + FTH1 chr11 61734919 - Exonic hg19 Non-Cancer TCGA-A6-5665-11A 3 12 Out-of-frame Inter-chr q12.3 128303 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-AZ-6603-11A 2 1 CDS-5'UTR Intra-chr q21.31 128304 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-AZ-6603-11A 2 1 3'UTR-3'UTR Intra-chr 128305 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44648235 - Exonic hg19 Non-Cancer TCGA-A6-5667-11A 5 15 CDS-5'UTR Intra-chr q21.31 128306 ChimerSeq STARFusion TCGA RNA-Seq PLCXD1-IGH@ PLCXD1 chrX 209756 + IGH@ chr14 106054734 - Exonic hg19 Non-Cancer TCGA-A6-5667-11A 8 0 Out-of-frame Inter-chr p22.33 32.33 128307 ChimerSeq STARFusion TCGA RNA-Seq PLCXD1-IGHA2 PLCXD1 chrX 209756 + IGHA2 chr14 106054734 - Exonic hg19 Non-Cancer TCGA-A6-5667-11A 8 0 Out-of-frame Inter-chr p22.33 128308 ChimerSeq STARFusion TCGA RNA-Seq HIC2-PI4KA HIC2 chr22 21797146 + PI4KA chr22 21088482 - Exonic hg19 Non-Cancer TCGA-A6-5667-11A 2 4 Out-of-frame Intra-chr q11.21 Transcription factor q11.21 128309 ChimerSeq STARFusion TCGA RNA-Seq RNA45S5-FTH1 RNA45S5 chrUn_gl000220 114137 + FTH1 chr11 61734930 - Exonic hg19 Non-Cancer TCGA-A6-2684-11A 3 88 Out-of-frame Inter-chr q12.3 128310 ChimerSeq STARFusion TCGA RNA-Seq PRSS3-TMEM45B PRSS3 chr9 33750725 + TMEM45B chr11 129722370 + Exonic hg19 Non-Cancer TCGA-A6-2684-11A 2 0 5'UTR-5'UTR Inter-chr p13.3 q24.3 128311 ChimerSeq STARFusion TCGA RNA-Seq ENO1-EDARADD ENO1 chr1 8923294 - EDARADD chr1 236647641 + Exonic hg19 Non-Cancer TCGA-AZ-6599-11A 5 15 Out-of-frame Intra-chr p36.23 q42.3 128312 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 Non-Cancer TCGA-A6-5659-11A 4 325 Out-of-frame Intra-chr q11.22 128313 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-A6-5659-11A 4 0 Out-of-frame Inter-chr q11.2 p22.11 128314 ChimerSeq STARFusion TCGA RNA-Seq CNRIP1-PPP3R1 CNRIP1 chr2 68544289 - PPP3R1 chr2 68444263 - Exonic hg19 Non-Cancer TCGA-06-0675-11A 6 16 In-Frame Intra-chr p14 p14 128315 ChimerSeq STARFusion TCGA RNA-Seq TTTY15-ATP1A2 TTTY15 chrY 14802118 + ATP1A2 chr1 160112616 + Exonic hg19 Non-Cancer TCGA-06-0675-11A 7 2 Out-of-frame Inter-chr q11.221 q23.2 128316 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-06-0675-11A 2 17 CDS-5'UTR Intra-chr p23.2 128317 ChimerSeq STARFusion TCGA RNA-Seq TTTY15-ATP1A2 TTTY15 chrY 14802098 + ATP1A2 chr1 160112596 + Exonic hg19 Non-Cancer TCGA-06-0675-11A 4 2 Out-of-frame Inter-chr q11.221 q23.2 128318 ChimerSeq STARFusion TCGA RNA-Seq FITM2-C20orf111 FITM2 chr20 42939616 - C20orf111 chr20 42835638 - Exonic hg19 Non-Cancer TCGA-06-0675-11A 3 3 CDS-5'UTR Intra-chr q13.12 128319 ChimerSeq STARFusion TCGA RNA-Seq SLAIN2-SLC10A4 SLAIN2 chr4 48385801 + SLC10A4 chr4 48486949 + Exonic hg19 Non-Cancer TCGA-06-0675-11A 2 0 Out-of-frame Intra-chr p11 p11 128320 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-06-0678-11A 5 12 CDS-5'UTR Intra-chr p23.2 128321 ChimerSeq STARFusion TCGA RNA-Seq EIF3A-UNC13A EIF3A chr10 120802166 - UNC13A chr19 17732679 - Exonic hg19 Non-Cancer TCGA-06-0678-11A 6 0 Out-of-frame Inter-chr q26.11 p13.11 128322 ChimerSeq STARFusion TCGA RNA-Seq CNRIP1-PPP3R1 CNRIP1 chr2 68544289 - PPP3R1 chr2 68444263 - Exonic hg19 Non-Cancer TCGA-06-0678-11A 2 4 In-Frame Intra-chr p14 p14 128323 ChimerSeq STARFusion TCGA RNA-Seq POC1B-DUSP6 POC1B chr12 89860547 - DUSP6 chr12 89743338 - Exonic hg19 Non-Cancer TCGA-06-0678-11A 2 3 Out-of-frame Intra-chr q21.33 q21.33 Tumor suppressor gene 128324 ChimerSeq STARFusion TCGA RNA-Seq LOC644961-ACTG1 LOC644961 chr1 27652886 + ACTG1 chr17 79477128 - Exonic hg19 Non-Cancer TCGA-06-AABW-11A 3 137 Out-of-frame Inter-chr q25.3 128325 ChimerSeq STARFusion TCGA RNA-Seq PDE4DIP-LOC653513 PDE4DIP chr1 145015860 - LOC653513 chr1 144679969 - Exonic hg19 Non-Cancer TCGA-06-AABW-11A 3 22 Out-of-frame Intra-chr q21.2 Oncogene 128326 ChimerSeq STARFusion TCGA RNA-Seq EIF3A-UNC13A EIF3A chr10 120802163 - UNC13A chr19 17732676 - Exonic hg19 Non-Cancer TCGA-06-AABW-11A 3 0 Out-of-frame Inter-chr q26.11 p13.11 128327 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-06-AABW-11A 3 0 Out-of-frame Inter-chr q11.2 p22.11 128328 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-06-0680-11A 7 29 CDS-5'UTR Intra-chr p23.2 128329 ChimerSeq STARFusion TCGA RNA-Seq TTTY15-ATP1A2 TTTY15 chrY 14802098 + ATP1A2 chr1 160112596 + Exonic hg19 Non-Cancer TCGA-06-0680-11A 7 2 Out-of-frame Inter-chr q11.221 q23.2 128330 ChimerSeq STARFusion TCGA RNA-Seq TTTY15-ATP1A2 TTTY15 chrY 14802118 + ATP1A2 chr1 160112616 + Exonic hg19 Non-Cancer TCGA-06-0680-11A 6 2 Out-of-frame Inter-chr q11.221 q23.2 128331 ChimerSeq STARFusion TCGA RNA-Seq CNRIP1-PPP3R1 CNRIP1 chr2 68544289 - PPP3R1 chr2 68444263 - Exonic hg19 Non-Cancer TCGA-06-0680-11A 2 15 In-Frame Intra-chr p14 p14 128332 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-06-0681-11A 2 15 CDS-5'UTR Intra-chr p23.2 128333 ChimerSeq STARFusion TCGA RNA-Seq TTTY15-ATP1A2 TTTY15 chrY 14802098 + ATP1A2 chr1 160112596 + Exonic hg19 Non-Cancer TCGA-06-0681-11A 5 3 Out-of-frame Inter-chr q11.221 q23.2 128334 ChimerSeq STARFusion TCGA RNA-Seq EDARADD-ENO1 EDARADD chr1 236647127 + ENO1 chr1 8926377 - Exonic hg19 Non-Cancer TCGA-06-0681-11A 4 6 Out-of-frame Intra-chr q42.3 p36.23 128335 ChimerSeq STARFusion TCGA RNA-Seq TTTY15-ATP1A2 TTTY15 chrY 14802118 + ATP1A2 chr1 160112616 + Exonic hg19 Non-Cancer TCGA-06-0681-11A 4 3 Out-of-frame Inter-chr q11.221 q23.2 128336 ChimerSeq STARFusion TCGA RNA-Seq CNRIP1-PPP3R1 CNRIP1 chr2 68544289 - PPP3R1 chr2 68444263 - Exonic hg19 Non-Cancer TCGA-06-0681-11A 2 5 In-Frame Intra-chr p14 p14 128337 ChimerSeq STARFusion TCGA RNA-Seq ELMO1-AOAH ELMO1 chr7 36901264 - AOAH chr7 36726399 - Exonic hg19 Non-Cancer TCGA-06-0681-11A 2 1 In-Frame Intra-chr p14.1 p14.2 128338 ChimerSeq STARFusion TCGA RNA-Seq IGLL3P-GUSBP11 IGLL3P chr22 25715831 + GUSBP11 chr22 23981032 - Exonic hg19 Non-Cancer TCGA-KL-8326-11A 3 37 Out-of-frame Intra-chr q11.23 q11.23 128339 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-KL-8326-11A 6 3 Out-of-frame Inter-chr q13.13 p12.3 128340 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-KL-8326-11A 3 3 Out-of-frame Inter-chr q13.13 p12.3 128341 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-KL-8326-11A 2 5 CDS-5'UTR Intra-chr q21.31 128342 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-KL-8326-11A 2 4 3'UTR-3'UTR Intra-chr 128343 ChimerSeq STARFusion TCGA RNA-Seq HOXC10-FLJ12825 HOXC10 chr12 54379794 + FLJ12825 chr12 54512388 + Exonic hg19 Non-Cancer TCGA-KL-8326-11A 2 2 CDS-5'UTR Intra-chr q13.13 Transcription factor q13.13 128344 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-KN-8422-11A 5 4 CDS-5'UTR Intra-chr q21.31 128345 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-KN-8422-11A 5 4 3'UTR-3'UTR Intra-chr 128346 ChimerSeq STARFusion TCGA RNA-Seq CNKSR3-IPCEF1 CNKSR3 chr6 154731477 - IPCEF1 chr6 154610890 - Exonic hg19 Non-Cancer TCGA-KN-8422-11A 2 2 CDS-5'UTR Intra-chr q25.2 q25.2 128347 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-KN-8423-11A 13 43 Out-of-frame Intra-chr q11.22 q11.23 128348 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-KN-8423-11A 13 24 Out-of-frame Intra-chr q11.22 q11.22 128349 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854180 - CBX3 chr7 26241365 + Exonic hg19 Non-Cancer TCGA-KN-8423-11A 5 18 Out-of-frame Inter-chr q15.1 p15.2 128350 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-KN-8423-11A 2 10 5'UTR-CDS Intra-chr q13.1 q13.1 128351 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005213 - POLA1 chrX 24721386 + Exonic hg19 Non-Cancer TCGA-KN-8427-11A 12 0 Out-of-frame Inter-chr q11.2 p22.11 128352 ChimerSeq STARFusion TCGA RNA-Seq PFKFB3-LOC399715 PFKFB3 chr10 6268328 + LOC399715 chr10 6368509 + Exonic hg19 Non-Cancer TCGA-KN-8427-11A 2 11 CDS-5'UTR Intra-chr p15.1 128353 ChimerSeq STARFusion TCGA RNA-Seq TTTY14-NCRNA00185 TTTY14 chrY 21238931 - NCRNA00185 chrY 21039091 - Exonic hg19 Non-Cancer TCGA-KL-8332-11A 6 16 Out-of-frame Intra-chr q11.222 128354 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-KL-8332-11A 3 1 Out-of-frame Inter-chr q13.13 p12.3 128355 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005213 - POLA1 chrX 24721386 + Exonic hg19 Non-Cancer TCGA-KL-8332-11A 3 0 Out-of-frame Inter-chr q11.2 p22.11 128356 ChimerSeq STARFusion TCGA RNA-Seq ELOVL5-TINAG ELOVL5 chr6 53213615 - TINAG chr6 54245324 + Exonic hg19 Non-Cancer TCGA-KL-8332-11A 2 1 Out-of-frame Intra-chr p12.1 p12.1 128357 ChimerSeq STARFusion TCGA RNA-Seq BCAM-KRT8P33 BCAM chr19 45315805 + KRT8P33 chr5 122736876 - Exonic hg19 Non-Cancer TCGA-KN-8435-11A 10 1 Out-of-frame Inter-chr q13.32 q23.2 128358 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-KN-8435-11A 2 13 5'UTR-CDS Intra-chr q13.1 q13.1 128359 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-KN-8435-11A 2 12 Out-of-frame Intra-chr q11.22 q11.22 128360 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-KN-8426-11A 4 14 CDS-5'UTR Intra-chr p23.2 128361 ChimerSeq STARFusion TCGA RNA-Seq EDARADD-ENO1 EDARADD chr1 236647127 + ENO1 chr1 8926377 - Exonic hg19 Non-Cancer TCGA-KN-8426-11A 3 16 Out-of-frame Intra-chr q42.3 p36.23 128362 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-KN-8426-11A 6 3 CDS-5'UTR Intra-chr q21.31 128363 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-KN-8426-11A 6 3 3'UTR-3'UTR Intra-chr 128364 ChimerSeq STARFusion TCGA RNA-Seq LOC100506023-TNFSF4 LOC100506023 chr1 173445771 - TNFSF4 chr1 173157708 - Exonic hg19 Non-Cancer TCGA-KN-8426-11A 2 8 3'UTR-CDS Intra-chr q25.1 128365 ChimerSeq STARFusion TCGA RNA-Seq SLC3A1-PREPL SLC3A1 chr2 44541090 + PREPL chr2 44556251 - Exonic hg19 Non-Cancer TCGA-KN-8426-11A 2 1 In-Frame Intra-chr p21 p21 128366 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-KN-8430-11A 5 45 Out-of-frame Intra-chr q11.22 q11.23 128367 ChimerSeq STARFusion TCGA RNA-Seq H3F3B-HIST1H3J H3F3B chr17 73774891 - HIST1H3J chr6 27858351 - Exonic hg19 Non-Cancer TCGA-KN-8430-11A 13 0 Out-of-frame Inter-chr q25.1 p22.1 128368 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-KN-8430-11A 5 24 Out-of-frame Intra-chr q11.22 q11.22 128369 ChimerSeq STARFusion TCGA RNA-Seq ENO1-EDARADD ENO1 chr1 8926346 - EDARADD chr1 236647061 + Exonic hg19 Non-Cancer TCGA-KN-8429-11A 3 21 Out-of-frame Intra-chr p36.23 q42.3 128370 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-KN-8429-11A 3 0 Out-of-frame Inter-chr q11.2 p22.11 128371 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-KL-8324-11A 12 37 Out-of-frame Intra-chr q11.22 q11.23 128372 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-KL-8324-11A 12 21 Out-of-frame Intra-chr q11.22 q11.22 128373 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-KN-8436-11A 3 17 CDS-5'UTR Intra-chr p23.2 128374 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005213 - POLA1 chrX 24721386 + Exonic hg19 Non-Cancer TCGA-KN-8436-11A 7 0 Out-of-frame Inter-chr q11.2 p22.11 128375 ChimerSeq STARFusion TCGA RNA-Seq TTTY14-NCRNA00185 TTTY14 chrY 21238931 - NCRNA00185 chrY 21039091 - Exonic hg19 Non-Cancer TCGA-KN-8436-11A 3 6 Out-of-frame Intra-chr q11.222 128376 ChimerSeq STARFusion TCGA RNA-Seq ENO1-EDARADD ENO1 chr1 8926352 - EDARADD chr1 236647055 + Exonic hg19 Non-Cancer TCGA-KN-8431-11A 4 32 Out-of-frame Intra-chr p36.23 q42.3 128377 ChimerSeq STARFusion TCGA RNA-Seq ENO1-EDARADD ENO1 chr1 8926346 - EDARADD chr1 236647061 + Exonic hg19 Non-Cancer TCGA-KN-8431-11A 3 32 Out-of-frame Intra-chr p36.23 q42.3 128378 ChimerSeq STARFusion TCGA RNA-Seq EDARADD-ENO1 EDARADD chr1 236647127 + ENO1 chr1 8926377 - Exonic hg19 Non-Cancer TCGA-KN-8431-11A 3 11 Out-of-frame Intra-chr q42.3 p36.23 128379 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-KN-8431-11A 2 15 CDS-5'UTR Intra-chr p23.2 128380 ChimerSeq STARFusion TCGA RNA-Seq RNA45S5-FTH1 RNA45S5 chrUn_gl000220 115490 + FTH1 chr11 61734921 - Exonic hg19 Non-Cancer TCGA-KN-8431-11A 4 1 Out-of-frame Inter-chr q12.3 128381 ChimerSeq STARFusion TCGA RNA-Seq ASAH1-AQP2 ASAH1 chr8 17917192 - AQP2 chr12 50351685 + Exonic hg19 Non-Cancer TCGA-KN-8431-11A 3 1 Out-of-frame Inter-chr p22 q13.12 128382 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-KN-8419-11A 3 7 5'UTR-CDS Intra-chr q13.1 q13.1 128383 ChimerSeq STARFusion TCGA RNA-Seq PFKFB3-LOC399715 PFKFB3 chr10 6268328 + LOC399715 chr10 6368509 + Exonic hg19 Non-Cancer TCGA-KN-8419-11A 3 7 CDS-5'UTR Intra-chr p15.1 128384 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-KN-8419-11A 2 6 CDS-5'UTR Intra-chr p23.2 128385 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28152699 + Exonic hg19 Non-Cancer TCGA-KN-8419-11A 2 6 In-Frame Intra-chr p23.2 128386 ChimerSeq STARFusion TCGA RNA-Seq LYPLA2-LOC388499 LYPLA2 chr1 24121576 + LOC388499 chr19 7944009 - Exonic hg19 Non-Cancer TCGA-KN-8419-11A 3 1 Out-of-frame Inter-chr p36.11 128387 ChimerSeq STARFusion TCGA RNA-Seq SPAG16-VWC2L SPAG16 chr2 215013990 + VWC2L chr2 215301353 + Exonic hg19 Non-Cancer TCGA-KN-8419-11A 2 0 Out-of-frame Intra-chr q34 q34 128388 ChimerSeq STARFusion TCGA RNA-Seq TFG-GPR128 TFG chr3 100438902 + GPR128 chr3 100348442 + Exonic hg19 Non-Cancer TCGA-KN-8432-11A 16 68 In-Frame Intra-chr q12.2 128389 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-KN-8432-11A 6 17 CDS-5'UTR Intra-chr p23.2 128390 ChimerSeq STARFusion TCGA RNA-Seq PFKFB3-LOC399715 PFKFB3 chr10 6268328 + LOC399715 chr10 6368509 + Exonic hg19 Non-Cancer TCGA-KN-8432-11A 2 17 CDS-5'UTR Intra-chr p15.1 128391 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854971 - CBX3 chr7 26241389 + Exonic hg19 Non-Cancer TCGA-KN-8432-11A 3 10 Out-of-frame Inter-chr q15.1 p15.2 128392 ChimerSeq STARFusion TCGA RNA-Seq FITM2-C20orf111 FITM2 chr20 42939616 - C20orf111 chr20 42835638 - Exonic hg19 Non-Cancer TCGA-KN-8432-11A 2 7 CDS-5'UTR Intra-chr q13.12 128393 ChimerSeq STARFusion TCGA RNA-Seq CCDC7-C10orf68 CCDC7 chr10 32807433 + C10orf68 chr10 32974898 + Exonic hg19 Non-Cancer TCGA-KN-8432-11A 2 1 Out-of-frame Intra-chr p11.22 128394 ChimerSeq STARFusion TCGA RNA-Seq LINC00674-BPTF LINC00674 chr17 66099199 + BPTF chr17 65906993 + Exonic hg19 Non-Cancer TCGA-KN-8433-11A 4 20 Out-of-frame Intra-chr q24.2 q24.2 Transcription factor 128395 ChimerSeq STARFusion TCGA RNA-Seq NFYC-LOC494127 NFYC chr1 41232375 + LOC494127 chr9 89699278 - Exonic hg19 Non-Cancer TCGA-KN-8433-11A 3 1 CDS-3'UTR Inter-chr p34.2 Transcription factor 128396 ChimerSeq STARFusion TCGA RNA-Seq SLC16A12-LIPA SLC16A12 chr10 91222136 - LIPA chr10 91007406 - Exonic hg19 Non-Cancer TCGA-KN-8433-11A 3 1 CDS-5'UTR Intra-chr q23.31 q23.31 128397 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-KN-8433-11A 2 3 CDS-5'UTR Intra-chr p23.2 128398 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-KN-8433-11A 2 2 CDS-5'UTR Intra-chr q21.31 128399 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-KN-8433-11A 2 2 3'UTR-3'UTR Intra-chr 128400 ChimerSeq STARFusion TCGA RNA-Seq PRKCH-FLJ22447 PRKCH chr14 61997313 + FLJ22447 chr14 62117680 + Exonic hg19 Non-Cancer TCGA-KN-8433-11A 2 2 CDS-5'UTR Intra-chr q23.1 q23.1 128401 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-KO-8415-11A 2 13 CDS-5'UTR Intra-chr p23.2 128402 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-KN-8434-11A 2 4 CDS-5'UTR Intra-chr p23.2 128403 ChimerSeq STARFusion TCGA RNA-Seq LOC728875-SEC22B LOC728875 chr1 144520774 - SEC22B chr1 145103908 + Exonic hg19 Non-Cancer TCGA-KN-8434-11A 2 2 Out-of-frame Intra-chr p12 128404 ChimerSeq STARFusion TCGA RNA-Seq LOC100507373-IMMP2L LOC100507373 chr19 14266291 + IMMP2L chr7 111201979 - Exonic hg19 Non-Cancer TCGA-KN-8434-11A 2 1 5'UTR-5'UTR Inter-chr q31.1 128405 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 Non-Cancer TCGA-KN-8437-11A 4 709 Out-of-frame Intra-chr q11.22 128406 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854180 - CBX3 chr7 26241365 + Exonic hg19 Non-Cancer TCGA-KN-8437-11A 4 12 Out-of-frame Inter-chr q15.1 p15.2 128407 ChimerSeq STARFusion TCGA RNA-Seq PDE6B-PPP2R2D PDE6B chr4 619882 + PPP2R2D chr10 133753533 + Exonic hg19 Non-Cancer TCGA-KN-8437-11A 5 0 Out-of-frame Inter-chr p16.3 q26.3 128408 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-KN-8437-11A 3 0 Out-of-frame Inter-chr q11.2 p22.11 128409 ChimerSeq STARFusion TCGA RNA-Seq LOC100506368-TMEM135 LOC100506368 chr11 86669068 + TMEM135 chr11 86778736 + Exonic hg19 Non-Cancer TCGA-KN-8437-11A 2 1 5'UTR-5'UTR Intra-chr q14.2 128410 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-KL-8336-11A 4 34 Out-of-frame Intra-chr q11.22 q11.23 128411 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005213 - POLA1 chrX 24721386 + Exonic hg19 Non-Cancer TCGA-KL-8336-11A 9 0 Out-of-frame Inter-chr q11.2 p22.11 128412 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-KL-8336-11A 4 17 Out-of-frame Intra-chr q11.22 q11.22 128413 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854180 - CBX3 chr7 26241365 + Exonic hg19 Non-Cancer TCGA-KL-8336-11A 3 7 Out-of-frame Inter-chr q15.1 p15.2 128414 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-KO-8403-11A 2 27 5'UTR-CDS Intra-chr q13.1 q13.1 128415 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-KO-8403-11A 3 18 CDS-5'UTR Intra-chr p23.2 128416 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-KO-8403-11A 3 0 Out-of-frame Inter-chr q11.2 p22.11 128417 ChimerSeq STARFusion TCGA RNA-Seq SHROOM2-WWC3 SHROOM2 chrX 9912953 + WWC3 chrX 10031485 + Exonic hg19 Non-Cancer TCGA-KO-8403-11A 2 1 CDS-5'UTR Intra-chr p22.2 p22.2 128418 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-KN-8428-11A 3 6 CDS-5'UTR Intra-chr p23.2 128419 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-KN-8428-11A 3 2 Out-of-frame Inter-chr q13.13 p12.3 128420 ChimerSeq STARFusion TCGA RNA-Seq GNG10-UGCG GNG10 chr9 114429226 + UGCG chr9 114676885 + Exonic hg19 Non-Cancer TCGA-KN-8428-11A 2 2 3'UTR-CDS Intra-chr q31.3 q31.3 128421 ChimerSeq STARFusion TCGA RNA-Seq ATF2-CHN1 ATF2 chr2 175945388 - CHN1 chr2 175816930 - Exonic hg19 Non-Cancer TCGA-KN-8428-11A 2 0 In-Frame Intra-chr q31.1 Transcription factor q31.1 128422 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-KN-8424-11A 4 1 Out-of-frame Inter-chr q13.13 p12.3 128423 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-KL-8339-11A 4 6 CDS-5'UTR Intra-chr p23.2 128424 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-KL-8339-11A 4 2 CDS-5'UTR Intra-chr q21.31 128425 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-KL-8339-11A 4 1 3'UTR-3'UTR Intra-chr 128426 ChimerSeq STARFusion TCGA RNA-Seq HOXC10-LOC400043 HOXC10 chr12 54379794 + LOC400043 chr12 54525774 + Exonic hg19 Non-Cancer TCGA-KL-8339-11A 3 0 CDS-5'UTR Intra-chr q13.13 Transcription factor 128427 ChimerSeq STARFusion TCGA RNA-Seq PRKCH-FLJ22447 PRKCH chr14 61997313 + FLJ22447 chr14 62117680 + Exonic hg19 Non-Cancer TCGA-KL-8339-11A 2 1 CDS-5'UTR Intra-chr q23.1 q23.1 128428 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-KL-8339-11A 2 1 CDS-3'UTR Intra-chr q11.22 q22.2 128429 ChimerSeq STARFusion TCGA RNA-Seq ENO1-EDARADD ENO1 chr1 8926352 - EDARADD chr1 236647055 + Exonic hg19 Non-Cancer TCGA-KN-8425-11A 4 30 Out-of-frame Intra-chr p36.23 q42.3 128430 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-KN-8425-11A 5 23 CDS-5'UTR Intra-chr p23.2 128431 ChimerSeq STARFusion TCGA RNA-Seq EDARADD-ENO1 EDARADD chr1 236647127 + ENO1 chr1 8926377 - Exonic hg19 Non-Cancer TCGA-KN-8425-11A 6 11 Out-of-frame Intra-chr q42.3 p36.23 128432 ChimerSeq STARFusion TCGA RNA-Seq PFKFB3-LOC399715 PFKFB3 chr10 6268328 + LOC399715 chr10 6368509 + Exonic hg19 Non-Cancer TCGA-KN-8425-11A 3 19 CDS-5'UTR Intra-chr p15.1 128433 ChimerSeq STARFusion TCGA RNA-Seq HOXC10-LOC400043 HOXC10 chr12 54379794 + LOC400043 chr12 54525774 + Exonic hg19 Non-Cancer TCGA-KN-8425-11A 3 9 CDS-5'UTR Intra-chr q13.13 Transcription factor 128434 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-A3-3387-11A 3 2 Out-of-frame Inter-chr q13.13 p12.3 128435 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-CJ-5689-11A 4 1 CDS-5'UTR Intra-chr q21.31 128436 ChimerSeq STARFusion TCGA RNA-Seq MARVELD1-MEGF8 MARVELD1 chr10 99477356 + MEGF8 chr19 42854300 + Exonic hg19 Non-Cancer TCGA-CJ-5689-11A 3 0 Out-of-frame Inter-chr q24.2 Tumor suppressor gene q13.2 128437 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-CJ-5689-11A 3 0 Out-of-frame Inter-chr q11.2 p22.11 128438 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-B0-5690-11A 7 3 Out-of-frame Inter-chr q13.13 p12.3 128439 ChimerSeq STARFusion TCGA RNA-Seq ENO1-EDARADD ENO1 chr1 8926352 - EDARADD chr1 236647055 + Exonic hg19 Non-Cancer TCGA-B0-5690-11A 3 16 Out-of-frame Intra-chr p36.23 q42.3 128440 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-B0-5690-11A 4 7 CDS-5'UTR Intra-chr p23.2 128441 ChimerSeq STARFusion TCGA RNA-Seq EDARADD-ENO1 EDARADD chr1 236647127 + ENO1 chr1 8926377 - Exonic hg19 Non-Cancer TCGA-B0-5690-11A 3 6 Out-of-frame Intra-chr q42.3 p36.23 128442 ChimerSeq STARFusion TCGA RNA-Seq SLC16A12-LIPA SLC16A12 chr10 91222136 - LIPA chr10 91007406 - Exonic hg19 Non-Cancer TCGA-B0-5690-11A 4 1 CDS-5'UTR Intra-chr q23.31 q23.31 128443 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-B0-5690-11A 3 3 Out-of-frame Inter-chr q13.13 p12.3 128444 ChimerSeq STARFusion TCGA RNA-Seq HOXC10-LOC400043 HOXC10 chr12 54379794 + LOC400043 chr12 54525774 + Exonic hg19 Non-Cancer TCGA-B0-5690-11A 2 0 CDS-5'UTR Intra-chr q13.13 Transcription factor 128445 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-CZ-5988-11A 6 0 Out-of-frame Inter-chr q11.2 p22.11 128446 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-CZ-5988-11A 2 1 CDS-5'UTR Intra-chr q21.31 128447 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-CZ-5988-11A 2 0 3'UTR-3'UTR Intra-chr 128448 ChimerSeq STARFusion TCGA RNA-Seq ENO1-EDARADD ENO1 chr1 8934883 - EDARADD chr1 236646550 + Exonic hg19 Non-Cancer TCGA-CZ-5458-11A 3 52 Out-of-frame Intra-chr p36.23 q42.3 128449 ChimerSeq STARFusion TCGA RNA-Seq ENO1-EDARADD ENO1 chr1 8926346 - EDARADD chr1 236647061 + Exonic hg19 Non-Cancer TCGA-CZ-5458-11A 3 52 Out-of-frame Intra-chr p36.23 q42.3 128450 ChimerSeq STARFusion TCGA RNA-Seq EDARADD-ENO1 EDARADD chr1 236647127 + ENO1 chr1 8926377 - Exonic hg19 Non-Cancer TCGA-CZ-5458-11A 5 33 Out-of-frame Intra-chr q42.3 p36.23 128451 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854180 - CBX3 chr7 26241365 + Exonic hg19 Non-Cancer TCGA-CZ-5458-11A 6 15 Out-of-frame Inter-chr q15.1 p15.2 128452 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-CZ-5458-11A 4 8 Out-of-frame Inter-chr q13.13 p12.3 128453 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-CZ-5458-11A 2 9 CDS-3'UTR Intra-chr q11.22 q22.2 128454 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-CZ-5458-11A 4 0 Out-of-frame Inter-chr q11.2 p22.11 128455 ChimerSeq STARFusion TCGA RNA-Seq BMS1-LOC96610 BMS1 chr10 43315872 + LOC96610 chr22 22661471 + Exonic hg19 Non-Cancer TCGA-CZ-5458-11A 2 2 CDS-5'UTR Inter-chr q11.21 128456 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-B0-5709-11A 3 3 Out-of-frame Inter-chr q13.13 p12.3 128457 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-CW-5585-11A 5 0 Out-of-frame Inter-chr q11.2 p22.11 128458 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-CW-5585-11A 3 7 Out-of-frame Inter-chr q13.13 p12.3 128459 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-CW-5585-11A 2 3 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 128460 ChimerSeq STARFusion TCGA RNA-Seq WTAPP1-RUVBL1 WTAPP1 chr11 102663992 + RUVBL1 chr3 127801417 - Exonic hg19 Non-Cancer TCGA-CW-5585-11A 2 0 Out-of-frame Inter-chr q22.2 q21.3 128461 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-CZ-5469-11A 8 23 CDS-5'UTR Intra-chr p23.2 128462 ChimerSeq STARFusion TCGA RNA-Seq ENO1-EDARADD ENO1 chr1 8926346 - EDARADD chr1 236647061 + Exonic hg19 Non-Cancer TCGA-CZ-5469-11A 4 20 Out-of-frame Intra-chr p36.23 q42.3 128463 ChimerSeq STARFusion TCGA RNA-Seq ENO1-EDARADD ENO1 chr1 8926352 - EDARADD chr1 236647055 + Exonic hg19 Non-Cancer TCGA-CZ-5469-11A 3 20 Out-of-frame Intra-chr p36.23 q42.3 128464 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-CZ-5469-11A 6 8 Out-of-frame Inter-chr q13.13 p12.3 128465 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854180 - CBX3 chr7 26241365 + Exonic hg19 Non-Cancer TCGA-CZ-5469-11A 4 12 Out-of-frame Inter-chr q15.1 p15.2 128466 ChimerSeq STARFusion TCGA RNA-Seq EDARADD-ENO1 EDARADD chr1 236647127 + ENO1 chr1 8926377 - Exonic hg19 Non-Cancer TCGA-CZ-5469-11A 3 13 Out-of-frame Intra-chr q42.3 p36.23 128467 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-CZ-5469-11A 4 8 Out-of-frame Inter-chr q13.13 p12.3 128468 ChimerSeq STARFusion TCGA RNA-Seq TTTY14-NCRNA00185 TTTY14 chrY 21238931 - NCRNA00185 chrY 21039091 - Exonic hg19 Non-Cancer TCGA-CZ-5469-11A 3 11 Out-of-frame Intra-chr q11.222 128469 ChimerSeq STARFusion TCGA RNA-Seq ATP1A1-SLC12A1 ATP1A1 chr1 116933513 + SLC12A1 chr15 48513118 + Exonic hg19 Non-Cancer TCGA-CZ-5469-11A 2 4 In-Frame Inter-chr p13.1 q21.1 128470 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-CZ-5465-11A 13 4 Out-of-frame Inter-chr q13.13 p12.3 128471 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-CZ-5465-11A 6 22 CDS-5'UTR Intra-chr p23.2 128472 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-CZ-5465-11A 10 4 Out-of-frame Inter-chr q13.13 p12.3 128473 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854971 - CBX3 chr7 26241389 + Exonic hg19 Non-Cancer TCGA-CZ-5465-11A 3 19 Out-of-frame Inter-chr q15.1 p15.2 128474 ChimerSeq STARFusion TCGA RNA-Seq LOC100506368-TMEM135 LOC100506368 chr11 86669068 + TMEM135 chr11 86778736 + Exonic hg19 Non-Cancer TCGA-CZ-5465-11A 3 5 5'UTR-5'UTR Intra-chr q14.2 128475 ChimerSeq STARFusion TCGA RNA-Seq LOC729852-GLCCI1 LOC729852 chr7 7841374 + GLCCI1 chr7 8043538 + Exonic hg19 Non-Cancer TCGA-CZ-5465-11A 2 7 5'UTR-CDS Intra-chr p21.3 128476 ChimerSeq STARFusion TCGA RNA-Seq SLC16A12-LIPA SLC16A12 chr10 91222136 - LIPA chr10 91007406 - Exonic hg19 Non-Cancer TCGA-CZ-5465-11A 2 2 CDS-5'UTR Intra-chr q23.31 q23.31 128477 ChimerSeq STARFusion TCGA RNA-Seq ENO1-EDARADD ENO1 chr1 8926346 - EDARADD chr1 236647061 + Exonic hg19 Non-Cancer TCGA-CZ-5467-11A 4 38 Out-of-frame Intra-chr p36.23 q42.3 128478 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-CZ-5467-11A 2 8 CDS-3'UTR Intra-chr q11.22 q22.2 128479 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-CZ-5467-11A 3 1 Out-of-frame Inter-chr q13.13 p12.3 128480 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-CZ-5463-11A 4 8 CDS-3'UTR Intra-chr q11.22 q22.2 128481 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-CZ-5463-11A 3 7 Out-of-frame Inter-chr q13.13 p12.3 128482 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-CZ-5463-11A 3 3 CDS-5'UTR Intra-chr q21.31 128483 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-CZ-5463-11A 3 1 3'UTR-3'UTR Intra-chr 128484 ChimerSeq STARFusion TCGA RNA-Seq GAS6-FBLN1 GAS6 chr13 114541042 - FBLN1 chr22 45938035 + Exonic hg19 Non-Cancer TCGA-CZ-5463-11A 2 1 Out-of-frame Inter-chr q34 Oncogene q13.31 Tumor suppressor gene 128485 ChimerSeq STARFusion TCGA RNA-Seq NUMA1-WAC NUMA1 chr11 71729339 - WAC chr10 28824472 + Exonic hg19 Non-Cancer TCGA-CZ-5984-11A 4 1 Out-of-frame Inter-chr q13.4 Oncogene p12.1 128486 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230311 - PZP chr12 9311065 - Exonic hg19 Non-Cancer TCGA-CZ-5984-11A 3 3 Out-of-frame Intra-chr p13.31 p13.31 128487 ChimerSeq STARFusion TCGA RNA-Seq TTTY14-NCRNA00185 TTTY14 chrY 21239154 - NCRNA00185 chrY 21039091 - Exonic hg19 Non-Cancer TCGA-CZ-5984-11A 3 2 Out-of-frame Intra-chr q11.222 128488 ChimerSeq STARFusion TCGA RNA-Seq EDARADD-ENO1 EDARADD chr1 236647127 + ENO1 chr1 8926377 - Exonic hg19 Non-Cancer TCGA-CZ-5984-11A 3 1 Out-of-frame Intra-chr q42.3 p36.23 128489 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-CZ-5984-11A 3 0 Out-of-frame Inter-chr q11.2 p22.11 128490 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-CZ-5984-11A 2 2 CDS-5'UTR Intra-chr q21.31 128491 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-CZ-5984-11A 2 1 3'UTR-3'UTR Intra-chr 128492 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-CJ-5678-11A 4 4 Out-of-frame Inter-chr q13.13 p12.3 128493 ChimerSeq STARFusion TCGA RNA-Seq ENO1-EDARADD ENO1 chr1 8926346 - EDARADD chr1 236647061 + Exonic hg19 Non-Cancer TCGA-CJ-5672-11A 3 23 Out-of-frame Intra-chr p36.23 q42.3 128494 ChimerSeq STARFusion TCGA RNA-Seq ENO1-EDARADD ENO1 chr1 8926352 - EDARADD chr1 236647055 + Exonic hg19 Non-Cancer TCGA-CJ-5672-11A 3 23 Out-of-frame Intra-chr p36.23 q42.3 128495 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-CJ-5672-11A 7 0 Out-of-frame Inter-chr q11.2 p22.11 128496 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-CJ-5672-11A 3 0 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 128497 ChimerSeq STARFusion TCGA RNA-Seq LOC729852-GLCCI1 LOC729852 chr7 7841374 + GLCCI1 chr7 8043538 + Exonic hg19 Non-Cancer TCGA-CJ-5672-11A 2 3 5'UTR-CDS Intra-chr p21.3 128498 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-CZ-5987-11A 2 9 5'UTR-CDS Intra-chr q13.1 q13.1 128499 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-CZ-5987-11A 3 5 Out-of-frame Inter-chr q13.13 p12.3 128500 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-CZ-5987-11A 3 5 Out-of-frame Inter-chr q13.13 p12.3 128501 ChimerSeq STARFusion TCGA RNA-Seq LOC100506368-TMEM135 LOC100506368 chr11 86669068 + TMEM135 chr11 86778736 + Exonic hg19 Non-Cancer TCGA-CZ-5987-11A 3 3 5'UTR-5'UTR Intra-chr q14.2 128502 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-CZ-5987-11A 2 6 CDS-5'UTR Intra-chr p23.2 128503 ChimerSeq STARFusion TCGA RNA-Seq HOXC10-FLJ12825 HOXC10 chr12 54379794 + FLJ12825 chr12 54512388 + Exonic hg19 Non-Cancer TCGA-CZ-5987-11A 2 1 CDS-5'UTR Intra-chr q13.13 Transcription factor q13.13 128504 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230311 - PZP chr12 9311065 - Exonic hg19 Non-Cancer TCGA-CJ-5676-11A 3 9 Out-of-frame Intra-chr p13.31 p13.31 128505 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230305 - PZP chr12 9311059 - Exonic hg19 Non-Cancer TCGA-CJ-5676-11A 3 9 Out-of-frame Intra-chr p13.31 p13.31 128506 ChimerSeq STARFusion TCGA RNA-Seq LOC729852-GLCCI1 LOC729852 chr7 7841374 + GLCCI1 chr7 8043538 + Exonic hg19 Non-Cancer TCGA-CJ-5676-11A 2 0 5'UTR-CDS Intra-chr p21.3 128507 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-CZ-5457-11A 3 3 Out-of-frame Inter-chr q13.13 p12.3 128508 ChimerSeq STARFusion TCGA RNA-Seq ENO1-EDARADD ENO1 chr1 8926346 - EDARADD chr1 236647061 + Exonic hg19 Non-Cancer TCGA-B8-5549-11A 3 17 Out-of-frame Intra-chr p36.23 q42.3 128509 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-B8-5549-11A 3 5 CDS-3'UTR Intra-chr q11.22 q22.2 128510 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-B8-5549-11A 3 2 Out-of-frame Inter-chr q13.13 p12.3 128511 ChimerSeq STARFusion TCGA RNA-Seq FBXL5-HNRNPUL1 FBXL5 chr4 15613889 - HNRNPUL1 chr19 41774128 + Exonic hg19 Non-Cancer TCGA-B8-5549-11A 2 0 Out-of-frame Inter-chr p15.32 q13.2 128512 ChimerSeq STARFusion TCGA RNA-Seq ENO1-EDARADD ENO1 chr1 8926346 - EDARADD chr1 236647061 + Exonic hg19 Non-Cancer TCGA-CZ-5461-11A 4 48 Out-of-frame Intra-chr p36.23 q42.3 128513 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-CZ-5461-11A 13 0 Out-of-frame Inter-chr q11.2 p22.11 128514 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-CZ-5461-11A 10 5 Out-of-frame Inter-chr q13.13 p12.3 128515 ChimerSeq STARFusion TCGA RNA-Seq EDARADD-ENO1 EDARADD chr1 236647127 + ENO1 chr1 8926377 - Exonic hg19 Non-Cancer TCGA-CZ-5461-11A 5 23 Out-of-frame Intra-chr q42.3 p36.23 128516 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-CZ-5461-11A 3 3 CDS-3'UTR Intra-chr q11.22 q22.2 128517 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854180 - CBX3 chr7 26241365 + Exonic hg19 Non-Cancer TCGA-CZ-5989-11A 3 13 Out-of-frame Inter-chr q15.1 p15.2 128518 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-CZ-5989-11A 4 4 Out-of-frame Inter-chr q13.13 p12.3 128519 ChimerSeq STARFusion TCGA RNA-Seq LYPLA2-LOC388499 LYPLA2 chr1 24121576 + LOC388499 chr19 7944009 - Exonic hg19 Non-Cancer TCGA-CZ-5989-11A 3 1 Out-of-frame Inter-chr p36.11 128520 ChimerSeq STARFusion TCGA RNA-Seq LOC100128714-UQCC LOC100128714 chr15 26294389 + UQCC chr20 33981999 - Exonic hg19 Non-Cancer TCGA-CZ-5989-11A 3 0 5'UTR-CDS Inter-chr 128521 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-B8-4620-11A 2 3 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128522 ChimerSeq STARFusion TCGA RNA-Seq TSPAN4-CD151 TSPAN4 chr11 850367 + CD151 chr11 836063 + Exonic hg19 Non-Cancer TCGA-B8-4619-11A 11 37 CDS-5'UTR Intra-chr p15.5 p15.5 KB Pub 128523 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-B8-4619-11A 3 3 Out-of-frame Inter-chr q13.13 p12.3 128524 ChimerSeq STARFusion TCGA RNA-Seq EDARADD-ENO1 EDARADD chr1 236647127 + ENO1 chr1 8926377 - Exonic hg19 Non-Cancer TCGA-CZ-5452-11A 3 5 Out-of-frame Intra-chr q42.3 p36.23 128525 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-CZ-5452-11A 2 6 CDS-3'UTR Intra-chr q11.22 q22.2 128526 ChimerSeq STARFusion TCGA RNA-Seq LOC729852-GLCCI1 LOC729852 chr7 7841374 + GLCCI1 chr7 8043538 + Exonic hg19 Non-Cancer TCGA-CZ-5452-11A 2 2 5'UTR-CDS Intra-chr p21.3 128527 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-CW-5580-11A 9 8 Out-of-frame Inter-chr q13.13 p12.3 128528 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-CW-5580-11A 6 8 Out-of-frame Inter-chr q13.13 p12.3 128529 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-CW-5580-11A 5 5 CDS-3'UTR Intra-chr q11.22 q22.2 128530 ChimerSeq STARFusion TCGA RNA-Seq SLC16A12-LIPA SLC16A12 chr10 91222136 - LIPA chr10 91007406 - Exonic hg19 Non-Cancer TCGA-CW-5580-11A 2 2 CDS-5'UTR Intra-chr q23.31 q23.31 128531 ChimerSeq STARFusion TCGA RNA-Seq ENO1-EDARADD ENO1 chr1 8926346 - EDARADD chr1 236647061 + Exonic hg19 Non-Cancer TCGA-CZ-5454-11A 3 42 Out-of-frame Intra-chr p36.23 q42.3 128532 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-CZ-5454-11A 11 0 Out-of-frame Inter-chr q11.2 p22.11 128533 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-CZ-5454-11A 6 12 Out-of-frame Inter-chr q13.13 p12.3 128534 ChimerSeq STARFusion TCGA RNA-Seq EDARADD-ENO1 EDARADD chr1 236647127 + ENO1 chr1 8926377 - Exonic hg19 Non-Cancer TCGA-CZ-5454-11A 3 16 Out-of-frame Intra-chr q42.3 p36.23 128535 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-CZ-5454-11A 4 12 Out-of-frame Inter-chr q13.13 p12.3 128536 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-CZ-5454-11A 3 4 CDS-5'UTR Intra-chr q21.31 128537 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230305 - PZP chr12 9311059 - Exonic hg19 Non-Cancer TCGA-CZ-5454-11A 3 2 Out-of-frame Intra-chr p13.31 p13.31 128538 ChimerSeq STARFusion TCGA RNA-Seq LOC100506023-TNFSF4 LOC100506023 chr1 173431463 - TNFSF4 chr1 173157708 - Exonic hg19 Non-Cancer TCGA-CZ-5454-11A 2 6 3'UTR-CDS Intra-chr q25.1 128539 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-CZ-5454-11A 3 1 3'UTR-3'UTR Intra-chr 128540 ChimerSeq STARFusion TCGA RNA-Seq TM9SF3-UMOD TM9SF3 chr10 98346583 - UMOD chr16 20362018 - Exonic hg19 Non-Cancer TCGA-CZ-5454-11A 3 1 Out-of-frame Inter-chr q24.1 p12.3 128541 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-CZ-5454-11A 2 2 CDS-3'UTR Intra-chr q11.22 q22.2 128542 ChimerSeq STARFusion TCGA RNA-Seq SLC16A12-LIPA SLC16A12 chr10 91222136 - LIPA chr10 91007406 - Exonic hg19 Non-Cancer TCGA-CZ-5454-11A 2 1 CDS-5'UTR Intra-chr q23.31 q23.31 128543 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230311 - PZP chr12 9311065 - Exonic hg19 Non-Cancer TCGA-CW-5591-11A 5 7 Out-of-frame Intra-chr p13.31 p13.31 128544 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230305 - PZP chr12 9311059 - Exonic hg19 Non-Cancer TCGA-CW-5591-11A 4 7 Out-of-frame Intra-chr p13.31 p13.31 128545 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005213 - POLA1 chrX 24721386 + Exonic hg19 Non-Cancer TCGA-CW-5591-11A 3 0 Out-of-frame Inter-chr q11.2 p22.11 128546 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677324 + IGLL5 chr22 23235966 + Exonic hg19 Non-Cancer TCGA-B0-5402-11A 17 472 5'UTR-CDS Intra-chr q11.22 128547 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-B0-5402-11A 7 5 Out-of-frame Inter-chr q13.13 p12.3 128548 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-B0-5402-11A 5 3 CDS-3'UTR Intra-chr q11.22 q22.2 128549 ChimerSeq STARFusion TCGA RNA-Seq FLJ44635-TPT1 FLJ44635 chrX 71379908 + TPT1 chr13 45914279 - Exonic hg19 Non-Cancer TCGA-B0-5402-11A 4 2 Out-of-frame Inter-chr q14.13 128550 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-B0-5402-11A 3 5 Out-of-frame Inter-chr q13.13 p12.3 128551 ChimerSeq STARFusion TCGA RNA-Seq DSTN-PRMT2 DSTN chr20 17585257 + PRMT2 chr21 48073583 + Exonic hg19 Non-Cancer TCGA-B0-5402-11A 3 0 Out-of-frame Inter-chr p12.1 q22.3 128552 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-B8-4622-11A 3 4 Out-of-frame Inter-chr q13.13 p12.3 128553 ChimerSeq STARFusion TCGA RNA-Seq LOC729852-GLCCI1 LOC729852 chr7 7841374 + GLCCI1 chr7 8043538 + Exonic hg19 Non-Cancer TCGA-B8-4622-11A 2 1 5'UTR-CDS Intra-chr p21.3 128554 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-CZ-4865-11A 4 5 CDS-3'UTR Intra-chr q11.22 q22.2 128555 ChimerSeq STARFusion TCGA RNA-Seq EDARADD-ENO1 EDARADD chr1 236647127 + ENO1 chr1 8926377 - Exonic hg19 Non-Cancer TCGA-CZ-4865-11A 3 7 Out-of-frame Intra-chr q42.3 p36.23 128556 ChimerSeq STARFusion TCGA RNA-Seq UMOD-QKI UMOD chr16 20359758 - QKI chr6 163989086 + Exonic hg19 Non-Cancer TCGA-CZ-5453-11A 21 1 Out-of-frame Inter-chr p12.3 q26 128557 ChimerSeq STARFusion TCGA RNA-Seq SORL1-ATP1A1 SORL1 chr11 121424755 + ATP1A1 chr1 116943754 + Exonic hg19 Non-Cancer TCGA-CZ-5453-11A 16 2 Out-of-frame Inter-chr q24.1 p13.1 128558 ChimerSeq STARFusion TCGA RNA-Seq ENO1-EDARADD ENO1 chr1 8926346 - EDARADD chr1 236647061 + Exonic hg19 Non-Cancer TCGA-CZ-5453-11A 4 36 Out-of-frame Intra-chr p36.23 q42.3 128559 ChimerSeq STARFusion TCGA RNA-Seq ENO1-EDARADD ENO1 chr1 8923302 - EDARADD chr1 236647633 + Exonic hg19 Non-Cancer TCGA-CZ-5453-11A 4 36 Out-of-frame Intra-chr p36.23 q42.3 128560 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-CZ-5453-11A 9 6 Out-of-frame Inter-chr q13.13 p12.3 128561 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-CZ-5453-11A 6 6 Out-of-frame Inter-chr q13.13 p12.3 128562 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-CZ-5453-11A 4 4 CDS-3'UTR Intra-chr q11.22 q22.2 128563 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854971 - CBX3 chr7 26241389 + Exonic hg19 Non-Cancer TCGA-CZ-5453-11A 3 7 Out-of-frame Inter-chr q15.1 p15.2 128564 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-CZ-5453-11A 2 0 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 128565 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-CZ-5985-11A 4 5 Out-of-frame Inter-chr q13.13 p12.3 128566 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-CZ-5985-11A 3 5 Out-of-frame Inter-chr q13.13 p12.3 128567 ChimerSeq STARFusion TCGA RNA-Seq EDARADD-ENO1 EDARADD chr1 236647127 + ENO1 chr1 8926377 - Exonic hg19 Non-Cancer TCGA-CZ-5985-11A 3 4 Out-of-frame Intra-chr q42.3 p36.23 128568 ChimerSeq STARFusion TCGA RNA-Seq LOC729852-GLCCI1 LOC729852 chr7 7841374 + GLCCI1 chr7 8043538 + Exonic hg19 Non-Cancer TCGA-CZ-5985-11A 2 1 5'UTR-CDS Intra-chr p21.3 128569 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-B0-5711-11A 5 19 Out-of-frame Inter-chr q13.13 p12.3 128570 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-B0-5711-11A 5 19 Out-of-frame Inter-chr q13.13 p12.3 128571 ChimerSeq STARFusion TCGA RNA-Seq NFYC-LOC494127 NFYC chr1 41232375 + LOC494127 chr9 89699278 - Exonic hg19 Non-Cancer TCGA-B0-5711-11A 5 1 CDS-3'UTR Inter-chr p34.2 Transcription factor 128572 ChimerSeq STARFusion TCGA RNA-Seq EDARADD-ENO1 EDARADD chr1 236647127 + ENO1 chr1 8926377 - Exonic hg19 Non-Cancer TCGA-B0-5711-11A 3 7 Out-of-frame Intra-chr q42.3 p36.23 128573 ChimerSeq STARFusion TCGA RNA-Seq LOC729852-GLCCI1 LOC729852 chr7 7841374 + GLCCI1 chr7 8043538 + Exonic hg19 Non-Cancer TCGA-B0-5711-11A 3 2 5'UTR-CDS Intra-chr p21.3 128574 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-B2-5641-11A 4 10 CDS-5'UTR Intra-chr p23.2 128575 ChimerSeq STARFusion TCGA RNA-Seq LOC100506368-TMEM135 LOC100506368 chr11 86669068 + TMEM135 chr11 86778736 + Exonic hg19 Non-Cancer TCGA-B2-5641-11A 3 9 5'UTR-5'UTR Intra-chr q14.2 128576 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-B2-5641-11A 3 2 Out-of-frame Inter-chr q13.13 p12.3 128577 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-CZ-5986-11A 3 1 Out-of-frame Inter-chr q13.13 p12.3 128578 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-CZ-5986-11A 2 4 CDS-5'UTR Intra-chr p23.2 128579 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-CJ-5677-11A 3 8 Out-of-frame Inter-chr q13.13 p12.3 128580 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-CJ-5677-11A 2 3 CDS-3'UTR Intra-chr q11.22 q22.2 128581 ChimerSeq STARFusion TCGA RNA-Seq POMT1-IVNS1ABP POMT1 chr9 134381840 + IVNS1ABP chr1 185274775 - Exonic hg19 Non-Cancer TCGA-CJ-5677-11A 2 0 Out-of-frame Inter-chr q34.13 q25.3 128582 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-CJ-5680-11A 5 2 Out-of-frame Inter-chr q13.13 p12.3 128583 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-CJ-5680-11A 4 2 Out-of-frame Inter-chr q13.13 p12.3 128584 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-CJ-5680-11A 2 5 CDS-5'UTR Intra-chr p23.2 128585 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230305 - PZP chr12 9311059 - Exonic hg19 Non-Cancer TCGA-B0-5691-11A 3 21 Out-of-frame Intra-chr p13.31 p13.31 128586 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-B0-5691-11A 2 1 CDS-5'UTR Intra-chr q21.31 128587 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-B0-5691-11A 2 1 3'UTR-3'UTR Intra-chr 128588 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44648235 - Exonic hg19 Non-Cancer TCGA-B0-5697-11A 3 3 CDS-5'UTR Intra-chr q21.31 128589 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230305 - PZP chr12 9311059 - Exonic hg19 Non-Cancer TCGA-B0-5697-11A 3 1 Out-of-frame Intra-chr p13.31 p13.31 128590 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-B0-5697-11A 2 3 CDS-5'UTR Intra-chr q21.31 128591 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-B0-5697-11A 2 1 3'UTR-3'UTR Intra-chr 128592 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230311 - PZP chr12 9311065 - Exonic hg19 Non-Cancer TCGA-B0-5696-11A 3 1 Out-of-frame Intra-chr p13.31 p13.31 128593 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-CJ-5679-11A 3 3 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 128594 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-CJ-5679-11A 2 5 CDS-3'UTR Intra-chr q11.22 q22.2 128595 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-CJ-5679-11A 3 0 Out-of-frame Inter-chr q11.2 p22.11 128596 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-CW-6090-11A 5 15 Out-of-frame Inter-chr q13.13 p12.3 128597 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-CW-6090-11A 5 15 Out-of-frame Inter-chr q13.13 p12.3 128598 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-CZ-5470-11A 8 15 Out-of-frame Inter-chr q13.13 p12.3 128599 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-CZ-5470-11A 3 15 Out-of-frame Inter-chr q13.13 p12.3 128600 ChimerSeq STARFusion TCGA RNA-Seq DSTN-PRMT2 DSTN chr20 17585257 + PRMT2 chr21 48073583 + Exonic hg19 Non-Cancer TCGA-CZ-5470-11A 4 0 Out-of-frame Inter-chr p12.1 q22.3 128601 ChimerSeq STARFusion TCGA RNA-Seq RNA45S5-GNAS RNA45S5 chrUn_gl000220 115490 + GNAS chr20 57466775 + Exonic hg19 Non-Cancer TCGA-CZ-5470-11A 3 2 Out-of-frame Inter-chr q13.32 Oncogene 128602 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LOC728407 TIMM23 chr10 51606988 - LOC728407 chr10 51262177 - Exonic hg19 Non-Cancer TCGA-CZ-5470-11A 2 1 CDS-3'UTR Intra-chr q11.22 128603 ChimerSeq STARFusion TCGA RNA-Seq AGPAT9-CCNI AGPAT9 chr4 84465755 + CCNI chr4 77987558 - Exonic hg19 Non-Cancer TCGA-CZ-5470-11A 2 0 CDS-5'UTR Intra-chr q21.1 128604 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-CZ-5982-11A 3 5 Out-of-frame Inter-chr q13.13 p12.3 128605 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-CZ-4863-11A 5 8 CDS-3'UTR Intra-chr q11.22 q22.2 128606 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-CZ-5451-11A 7 16 Out-of-frame Inter-chr q13.13 p12.3 128607 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-CZ-5451-11A 5 16 Out-of-frame Inter-chr q13.13 p12.3 128608 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-CZ-5451-11A 2 8 CDS-5'UTR Intra-chr p23.2 128609 ChimerSeq STARFusion TCGA RNA-Seq LOC100506023-TNFSF4 LOC100506023 chr1 173431463 - TNFSF4 chr1 173157708 - Exonic hg19 Non-Cancer TCGA-CZ-5451-11A 2 4 3'UTR-CDS Intra-chr q25.1 128610 ChimerSeq STARFusion TCGA RNA-Seq PRKCH-FLJ22447 PRKCH chr14 61997313 + FLJ22447 chr14 62117680 + Exonic hg19 Non-Cancer TCGA-CZ-5451-11A 2 1 CDS-5'UTR Intra-chr q23.1 q23.1 128611 ChimerSeq STARFusion TCGA RNA-Seq LIFR-SMC1A LIFR chr5 38595363 - SMC1A chrX 53442118 - Exonic hg19 Non-Cancer TCGA-CZ-5451-11A 2 0 5'UTR-CDS Inter-chr p13.1 Oncogene Tumor suppressor gene p11.22 128612 ChimerSeq STARFusion TCGA RNA-Seq NXN-RBX1 NXN chr17 722679 - RBX1 chr22 41349559 + Exonic hg19 Non-Cancer TCGA-CZ-5451-11A 2 0 Out-of-frame Inter-chr p13.3 q13.2 128613 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-B0-5706-11A 7 5 CDS-5'UTR Intra-chr q21.31 128614 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-B0-5706-11A 7 1 3'UTR-3'UTR Intra-chr 128615 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-CW-6088-11A 3 55 5'UTR-CDS Intra-chr q13.1 q13.1 128616 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-CW-6088-11A 8 26 CDS-5'UTR Intra-chr p23.2 128617 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-CW-6088-11A 9 14 Out-of-frame Inter-chr q13.13 p12.3 128618 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-CW-6088-11A 3 14 Out-of-frame Inter-chr q13.13 p12.3 128619 ChimerSeq STARFusion TCGA RNA-Seq LOC100506368-TMEM135 LOC100506368 chr11 86669068 + TMEM135 chr11 86778736 + Exonic hg19 Non-Cancer TCGA-CW-6088-11A 2 5 5'UTR-5'UTR Intra-chr q14.2 128620 ChimerSeq STARFusion TCGA RNA-Seq AGBL4-BEND5 AGBL4 chr1 49332863 - BEND5 chr1 49227142 - Exonic hg19 Non-Cancer TCGA-CW-6088-11A 2 0 In-Frame Intra-chr p33 p33 128621 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-B0-4712-11A 14 0 Out-of-frame Inter-chr q11.2 p22.11 128622 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-B0-4712-11A 4 11 Out-of-frame Inter-chr q13.13 p12.3 128623 ChimerSeq STARFusion TCGA RNA-Seq EDARADD-ENO1 EDARADD chr1 236647141 + ENO1 chr1 8926446 - Exonic hg19 Non-Cancer TCGA-B0-4712-11A 3 13 Out-of-frame Intra-chr q42.3 p36.23 128624 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-B0-4712-11A 3 11 Out-of-frame Inter-chr q13.13 p12.3 128625 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-B0-4712-11A 3 10 CDS-3'UTR Intra-chr q11.22 q22.2 128626 ChimerSeq STARFusion TCGA RNA-Seq LOC729852-GLCCI1 LOC729852 chr7 7841374 + GLCCI1 chr7 8043538 + Exonic hg19 Non-Cancer TCGA-B0-4712-11A 2 2 5'UTR-CDS Intra-chr p21.3 128627 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-CZ-5466-11A 10 6 Out-of-frame Inter-chr q13.13 p12.3 128628 ChimerSeq STARFusion TCGA RNA-Seq TTTY14-NCRNA00185 TTTY14 chrY 21238931 - NCRNA00185 chrY 21039091 - Exonic hg19 Non-Cancer TCGA-CZ-5466-11A 5 7 Out-of-frame Intra-chr q11.222 128629 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-CZ-5466-11A 4 6 Out-of-frame Inter-chr q13.13 p12.3 128630 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-CZ-5466-11A 3 7 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128631 ChimerSeq STARFusion TCGA RNA-Seq NFYC-LOC494127 NFYC chr1 41232375 + LOC494127 chr9 89699278 - Exonic hg19 Non-Cancer TCGA-CZ-5466-11A 4 2 CDS-3'UTR Inter-chr p34.2 Transcription factor 128632 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-CZ-5466-11A 3 4 CDS-5'UTR Intra-chr p23.2 128633 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-CZ-5466-11A 2 6 5'UTR-CDS Intra-chr q13.1 q13.1 128634 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-B0-5701-11A 4 16 5'UTR-CDS Intra-chr q13.1 q13.1 128635 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-B0-5701-11A 5 9 Out-of-frame Inter-chr q13.13 p12.3 128636 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-B0-5701-11A 3 9 Out-of-frame Inter-chr q13.13 p12.3 128637 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230311 - PZP chr12 9311065 - Exonic hg19 Non-Cancer TCGA-B0-5701-11A 3 6 Out-of-frame Intra-chr p13.31 p13.31 128638 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854971 - CBX3 chr7 26241389 + Exonic hg19 Non-Cancer TCGA-B0-5701-11A 3 4 Out-of-frame Inter-chr q15.1 p15.2 128639 ChimerSeq STARFusion TCGA RNA-Seq HOXC10-LOC400043 HOXC10 chr12 54379794 + LOC400043 chr12 54525774 + Exonic hg19 Non-Cancer TCGA-B0-5701-11A 3 2 CDS-5'UTR Intra-chr q13.13 Transcription factor 128640 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28152699 + Exonic hg19 Non-Cancer TCGA-B0-5701-11A 2 6 In-Frame Intra-chr p23.2 128641 ChimerSeq STARFusion TCGA RNA-Seq LOC100506368-TMEM135 LOC100506368 chr11 86669068 + TMEM135 chr11 86778736 + Exonic hg19 Non-Cancer TCGA-B0-5701-11A 2 4 5'UTR-5'UTR Intra-chr q14.2 128642 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-B0-5701-11A 3 0 Out-of-frame Inter-chr q11.2 p22.11 128643 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-A3-3358-11A 4 1 Out-of-frame Inter-chr q13.13 p12.3 128644 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005213 - POLA1 chrX 24721386 + Exonic hg19 Non-Cancer TCGA-A3-3358-11A 3 0 Out-of-frame Inter-chr q11.2 p22.11 128645 ChimerSeq STARFusion TCGA RNA-Seq LOC729852-GLCCI1 LOC729852 chr7 7841374 + GLCCI1 chr7 8043538 + Exonic hg19 Non-Cancer TCGA-A3-3358-11A 2 0 5'UTR-CDS Intra-chr p21.3 128646 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-CW-5587-11A 2 4 CDS-3'UTR Intra-chr q11.22 q22.2 128647 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-CW-5587-11A 2 1 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 128648 ChimerSeq STARFusion TCGA RNA-Seq TFG-GPR128 TFG chr3 100438902 + GPR128 chr3 100348442 + Exonic hg19 Non-Cancer TCGA-B0-5703-11A 24 65 In-Frame Intra-chr q12.2 128649 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-B0-5703-11A 2 5 CDS-5'UTR Intra-chr q21.31 128650 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-B0-5703-11A 3 1 Out-of-frame Inter-chr q13.13 p12.3 128651 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-B0-5703-11A 2 2 3'UTR-3'UTR Intra-chr 128652 ChimerSeq STARFusion TCGA RNA-Seq ROBO1-PSMD6 ROBO1 chr3 78987751 - PSMD6 chr3 64008199 - Exonic hg19 Non-Cancer TCGA-B0-5703-11A 2 0 In-Frame Intra-chr p12.3 Tumor suppressor gene p14.1 128653 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854971 - CBX3 chr7 26241389 + Exonic hg19 Non-Cancer TCGA-B2-5636-11A 3 5 Out-of-frame Inter-chr q15.1 p15.2 128654 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854180 - CBX3 chr7 26241365 + Exonic hg19 Non-Cancer TCGA-B2-5636-11A 3 5 Out-of-frame Inter-chr q15.1 p15.2 128655 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-B2-5636-11A 3 0 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 128656 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-B2-5636-11A 2 2 CDS-5'UTR Intra-chr q21.31 128657 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-B2-5636-11A 2 1 3'UTR-3'UTR Intra-chr 128658 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-CW-6087-11A 6 13 Out-of-frame Inter-chr q13.13 p12.3 128659 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-CW-6087-11A 4 13 Out-of-frame Inter-chr q13.13 p12.3 128660 ChimerSeq STARFusion TCGA RNA-Seq EDARADD-ENO1 EDARADD chr1 236647127 + ENO1 chr1 8926377 - Exonic hg19 Non-Cancer TCGA-CW-6087-11A 3 11 Out-of-frame Intra-chr q42.3 p36.23 128661 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-CW-6087-11A 5 0 Out-of-frame Inter-chr q11.2 p22.11 128662 ChimerSeq STARFusion TCGA RNA-Seq LOC100506023-TNFSF4 LOC100506023 chr1 173445771 - TNFSF4 chr1 173157708 - Exonic hg19 Non-Cancer TCGA-CW-6087-11A 2 2 3'UTR-CDS Intra-chr q25.1 128663 ChimerSeq STARFusion TCGA RNA-Seq ENO1-EDARADD ENO1 chr1 8926352 - EDARADD chr1 236647055 + Exonic hg19 Non-Cancer TCGA-CW-5584-11A 3 21 Out-of-frame Intra-chr p36.23 q42.3 128664 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-CW-5584-11A 5 5 Out-of-frame Inter-chr q13.13 p12.3 128665 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-CW-5584-11A 3 5 Out-of-frame Inter-chr q13.13 p12.3 128666 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230311 - PZP chr12 9311065 - Exonic hg19 Non-Cancer TCGA-CW-5584-11A 3 2 Out-of-frame Intra-chr p13.31 p13.31 128667 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230305 - PZP chr12 9311059 - Exonic hg19 Non-Cancer TCGA-CW-5584-11A 3 2 Out-of-frame Intra-chr p13.31 p13.31 128668 ChimerSeq STARFusion TCGA RNA-Seq AGBL4-BEND5 AGBL4 chr1 49332863 - BEND5 chr1 49227142 - Exonic hg19 Non-Cancer TCGA-CW-5584-11A 2 4 In-Frame Intra-chr p33 p33 128669 ChimerSeq STARFusion TCGA RNA-Seq EDARADD-ENO1 EDARADD chr1 236647127 + ENO1 chr1 8926377 - Exonic hg19 Non-Cancer TCGA-CZ-4864-11A 3 9 Out-of-frame Intra-chr q42.3 p36.23 128670 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-CZ-4864-11A 4 2 CDS-3'UTR Intra-chr q11.22 q22.2 128671 ChimerSeq STARFusion TCGA RNA-Seq PLG-LPA PLG chr6 161152146 + LPA chr6 161020555 - Exonic hg19 Non-Cancer TCGA-CZ-4864-11A 3 4 Out-of-frame Intra-chr q26 q26 128672 ChimerSeq STARFusion TCGA RNA-Seq PTCHD3P1-RAB18 PTCHD3P1 chr10 29704341 + RAB18 chr10 27815757 + Exonic hg19 Non-Cancer TCGA-CZ-4864-11A 2 1 Out-of-frame Intra-chr p11.23 p12.1 128673 ChimerSeq STARFusion TCGA RNA-Seq SLC16A12-LIPA SLC16A12 chr10 91222136 - LIPA chr10 91007406 - Exonic hg19 Non-Cancer TCGA-CZ-4864-11A 2 1 CDS-5'UTR Intra-chr q23.31 q23.31 128674 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-CZ-5468-11A 4 3 Out-of-frame Inter-chr q13.13 p12.3 128675 ChimerSeq STARFusion TCGA RNA-Seq DSTN-PRMT2 DSTN chr20 17585257 + PRMT2 chr21 48073583 + Exonic hg19 Non-Cancer TCGA-CZ-5468-11A 3 0 Out-of-frame Inter-chr p12.1 q22.3 128676 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LOC728407 TIMM23 chr10 51606988 - LOC728407 chr10 51262177 - Exonic hg19 Non-Cancer TCGA-CZ-5468-11A 2 0 CDS-3'UTR Intra-chr q11.22 128677 ChimerSeq STARFusion TCGA RNA-Seq GAS6-RASA3 GAS6 chr13 114529969 - RASA3 chr13 114751269 - Exonic hg19 Non-Cancer TCGA-CJ-5681-11A 3 12 In-Frame Intra-chr q34 Oncogene 128678 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-CJ-5681-11A 3 12 Out-of-frame Inter-chr q13.13 p12.3 128679 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-CJ-5681-11A 3 1 CDS-5'UTR Intra-chr q21.31 128680 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-CJ-5681-11A 3 1 3'UTR-3'UTR Intra-chr 128681 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-CJ-5681-11A 3 1 CDS-3'UTR Intra-chr q11.22 q22.2 128682 ChimerSeq STARFusion TCGA RNA-Seq SYTL2-PICALM SYTL2 chr11 85468668 - PICALM chr11 85685855 - Exonic hg19 Non-Cancer TCGA-CJ-5681-11A 2 2 Out-of-frame Intra-chr q14.1 q14.2 128683 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-CJ-6030-11A 4 6 Out-of-frame Inter-chr q13.13 p12.3 128684 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-CJ-6030-11A 2 9 5'UTR-CDS Intra-chr q13.1 q13.1 128685 ChimerSeq STARFusion TCGA RNA-Seq LOC100506368-TMEM135 LOC100506368 chr11 86669068 + TMEM135 chr11 86778736 + Exonic hg19 Non-Cancer TCGA-CJ-6030-11A 2 5 5'UTR-5'UTR Intra-chr q14.2 128686 ChimerSeq STARFusion TCGA RNA-Seq MRPL33-BRE MRPL33 chr2 27995559 + BRE chr2 28117400 + Exonic hg19 Non-Cancer TCGA-CJ-6030-11A 3 1 CDS-5'UTR Intra-chr p23.2 128687 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-B0-4700-11A 3 5 CDS-5'UTR Intra-chr q21.31 128688 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-B0-4700-11A 3 4 3'UTR-3'UTR Intra-chr 128689 ChimerSeq STARFusion TCGA RNA-Seq HNRNPH1-LRMP HNRNPH1 chr5 179047893 - LRMP chr12 25232590 + Exonic hg19 Non-Cancer TCGA-CW-5581-11A 2 0 Out-of-frame Inter-chr q35.3 p12.1 Tumor suppressor gene 128690 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-B0-5712-11A 6 13 Out-of-frame Inter-chr q13.13 p12.3 128691 ChimerSeq STARFusion TCGA RNA-Seq HP-RNA45S5 HP chr16 72094836 + RNA45S5 chrUn_gl000220 114600 + Exonic hg19 Non-Cancer TCGA-DD-A1EC-11A 5 847 Out-of-frame Inter-chr q22.2 Tumor suppressor gene 128692 ChimerSeq STARFusion TCGA RNA-Seq F9-RNA45S5 F9 chrX 138645436 + RNA45S5 chrUn_gl000220 115675 + Exonic hg19 Non-Cancer TCGA-DD-A1EC-11A 3 12 Out-of-frame Inter-chr q27.1 128693 ChimerSeq STARFusion TCGA RNA-Seq TEX101-RNA45S5 TEX101 chr19 43910392 + RNA45S5 chrUn_gl000220 117008 + Exonic hg19 Non-Cancer TCGA-DD-A1EC-11A 3 1 Out-of-frame Inter-chr q13.31 128694 ChimerSeq STARFusion TCGA RNA-Seq ALDOB-ALB ALDOB chr9 104183755 - ALB chr4 74285305 + Exonic hg19 Non-Cancer TCGA-DD-A1EI-11A 4 110 Out-of-frame Inter-chr q31.1 q13.3 128695 ChimerSeq STARFusion TCGA RNA-Seq ADH1B-ALB ADH1B chr4 100242471 - ALB chr4 74279137 + Exonic hg19 Non-Cancer TCGA-DD-A11C-11A 2 13 Out-of-frame Intra-chr q23 q13.3 128696 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005213 - POLA1 chrX 24721386 + Exonic hg19 Non-Cancer TCGA-BC-A10Y-11A 3 0 Out-of-frame Inter-chr q11.2 p22.11 128697 ChimerSeq STARFusion TCGA RNA-Seq TF-CYP2C8 TF chr3 133478173 + CYP2C8 chr10 96827448 - Exonic hg19 Non-Cancer TCGA-BC-A10Y-11A 2 2 In-Frame Inter-chr q22.1 q23.33 128698 ChimerSeq STARFusion TCGA RNA-Seq MGMT-NPTN MGMT chr10 131334641 + NPTN chr15 73879959 - Exonic hg19 Non-Cancer TCGA-BC-A10Y-11A 2 0 In-Frame Inter-chr q26.3 q24.1 128699 ChimerSeq STARFusion TCGA RNA-Seq PLG-LPA PLG chr6 161173292 + LPA chr6 160952922 - Exonic hg19 Non-Cancer TCGA-BC-A10W-11A 2 1832 In-Frame Intra-chr q26 q26 128700 ChimerSeq STARFusion TCGA RNA-Seq FGG-ALB FGG chr4 155533543 - ALB chr4 74286809 + Exonic hg19 Non-Cancer TCGA-BC-A10W-11A 2 31 Out-of-frame Intra-chr q32.1 q13.3 128701 ChimerSeq STARFusion TCGA RNA-Seq ALB-FGA ALB chr4 74284002 + FGA chr4 155507309 - Exonic hg19 Non-Cancer TCGA-EP-A3RK-11A 3 221 Out-of-frame Intra-chr q13.3 q31.3 128702 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230311 - PZP chr12 9311065 - Exonic hg19 Non-Cancer TCGA-EP-A3RK-11A 6 15 Out-of-frame Intra-chr p13.31 p13.31 128703 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230305 - PZP chr12 9311059 - Exonic hg19 Non-Cancer TCGA-EP-A3RK-11A 4 15 Out-of-frame Intra-chr p13.31 p13.31 128704 ChimerSeq STARFusion TCGA RNA-Seq CERS2-ALAS1 CERS2 chr1 150947095 - ALAS1 chr3 52236523 + Exonic hg19 Non-Cancer TCGA-EP-A3RK-11A 2 1 Out-of-frame Inter-chr q21.3 p21.2 128705 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230311 - PZP chr12 9311065 - Exonic hg19 Non-Cancer TCGA-DD-A39Z-11A 4 74 Out-of-frame Intra-chr p13.31 p13.31 128706 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230305 - PZP chr12 9311059 - Exonic hg19 Non-Cancer TCGA-DD-A39Z-11A 4 74 Out-of-frame Intra-chr p13.31 p13.31 128707 ChimerSeq STARFusion TCGA RNA-Seq A1BG-ITIH4 A1BG chr19 58862757 - ITIH4 chr3 52852299 - Exonic hg19 Non-Cancer TCGA-DD-A39Z-11A 2 3 In-Frame Inter-chr q13.43 p21.1 128708 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230312 - PZP chr12 9311066 - Exonic hg19 Non-Cancer TCGA-DD-A3A5-11A 3 63 Out-of-frame Intra-chr p13.31 p13.31 128709 ChimerSeq STARFusion TCGA RNA-Seq MYH6-ORM1 MYH6 chr14 23869982 - ORM1 chr9 117085939 + Exonic hg19 Non-Cancer TCGA-DD-A3A5-11A 6 0 Out-of-frame Inter-chr q11.2 q32 128710 ChimerSeq STARFusion TCGA RNA-Seq RBP4-SERPINA1 RBP4 chr10 95353754 - SERPINA1 chr14 94849574 - Exonic hg19 Non-Cancer TCGA-DD-A39X-11A 5 32 Out-of-frame Inter-chr q23.33 q32.13 128711 ChimerSeq STARFusion TCGA RNA-Seq LOC100507053-ADH1B LOC100507053 chr4 100208117 + ADH1B chr4 100240024 - Exonic hg19 Non-Cancer TCGA-DD-A39X-11A 4 18 Out-of-frame Intra-chr q23 128712 ChimerSeq STARFusion TCGA RNA-Seq LPA-PLG LPA chr6 160958887 - PLG chr6 161173147 + Exonic hg19 Non-Cancer TCGA-DD-A39X-11A 3 5 Out-of-frame Intra-chr q26 q26 128713 ChimerSeq STARFusion TCGA RNA-Seq PLG-LPA PLG chr6 161152146 + LPA chr6 161020555 - Exonic hg19 Non-Cancer TCGA-DD-A119-11A 4 2575 Out-of-frame Intra-chr q26 q26 128714 ChimerSeq STARFusion TCGA RNA-Seq ALB-LOC100507053 ALB chr4 74285356 + LOC100507053 chr4 100054706 + Exonic hg19 Non-Cancer TCGA-BC-A10X-11A 2 5 CDS-5'UTR Intra-chr q13.3 128715 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005213 - POLA1 chrX 24721386 + Exonic hg19 Non-Cancer TCGA-BC-A10X-11A 3 0 Out-of-frame Inter-chr q11.2 p22.11 128716 ChimerSeq STARFusion TCGA RNA-Seq CCDC14-ALDH1L1 CCDC14 chr3 123679991 - ALDH1L1 chr3 125879845 - Exonic hg19 Non-Cancer TCGA-BC-A10X-11A 2 0 CDS-5'UTR Intra-chr q21.1 q21.3 128717 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677322 + IGLL5 chr22 23235961 + Exonic hg19 Non-Cancer TCGA-DD-A3A1-11A 8 81 Out-of-frame Intra-chr q11.22 128718 ChimerSeq STARFusion TCGA RNA-Seq ALB-C3 ALB chr4 74285356 + C3 chr19 6677982 - Exonic hg19 Non-Cancer TCGA-DD-A3A1-11A 3 21 Out-of-frame Inter-chr q13.3 p13.3 128719 ChimerSeq STARFusion TCGA RNA-Seq LPA-PLG LPA chr6 160958887 - PLG chr6 161173147 + Exonic hg19 Non-Cancer TCGA-DD-A3A1-11A 6 4 Out-of-frame Intra-chr q26 q26 128720 ChimerSeq STARFusion TCGA RNA-Seq LOC100507053-ADH1B LOC100507053 chr4 100208123 + ADH1B chr4 100240018 - Exonic hg19 Non-Cancer TCGA-FV-A3I1-11A 3 11 Out-of-frame Intra-chr q23 128721 ChimerSeq STARFusion TCGA RNA-Seq A1BG-ITIH4 A1BG chr19 58862757 - ITIH4 chr3 52852299 - Exonic hg19 Non-Cancer TCGA-FV-A3I1-11A 2 1 In-Frame Inter-chr q13.43 p21.1 128722 ChimerSeq STARFusion TCGA RNA-Seq RNA45S5-FTH1 RNA45S5 chrUn_gl000220 115490 + FTH1 chr11 61734921 - Exonic hg19 Non-Cancer TCGA-FV-A3I0-11A 3 0 Out-of-frame Inter-chr q12.3 128723 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-FV-A3I0-11A 2 1 CDS-3'UTR Intra-chr q11.22 q22.2 128724 ChimerSeq STARFusion TCGA RNA-Seq PLG-LPA PLG chr6 161152154 + LPA chr6 161020547 - Exonic hg19 Non-Cancer TCGA-EP-A26S-11A 4 1397 Out-of-frame Intra-chr q26 q26 128725 ChimerSeq STARFusion TCGA RNA-Seq PLG-LPA PLG chr6 161152146 + LPA chr6 161020555 - Exonic hg19 Non-Cancer TCGA-EP-A26S-11A 3 1397 Out-of-frame Intra-chr q26 q26 128726 ChimerSeq STARFusion TCGA RNA-Seq CLEC10A-ASGR2 CLEC10A chr17 6981301 - ASGR2 chr17 7011876 - Exonic hg19 Non-Cancer TCGA-EP-A26S-11A 13 0 Out-of-frame Intra-chr p13.1 p13.1 128727 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230305 - PZP chr12 9311059 - Exonic hg19 Non-Cancer TCGA-EP-A26S-11A 6 16 Out-of-frame Intra-chr p13.31 p13.31 128728 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230311 - PZP chr12 9311065 - Exonic hg19 Non-Cancer TCGA-EP-A26S-11A 3 16 Out-of-frame Intra-chr p13.31 p13.31 128729 ChimerSeq STARFusion TCGA RNA-Seq LPA-PLG LPA chr6 160961075 - PLG chr6 161160129 + Exonic hg19 Non-Cancer TCGA-EP-A26S-11A 3 5 Out-of-frame Intra-chr q26 q26 128730 ChimerSeq STARFusion TCGA RNA-Seq ALB-RAP1GDS1 ALB chr4 74276126 + RAP1GDS1 chr4 99313103 + Exonic hg19 Non-Cancer TCGA-DD-A113-11A 3 12 Out-of-frame Intra-chr q13.3 q23 128731 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-DD-A113-11A 3 0 Out-of-frame Inter-chr q11.2 p22.11 128732 ChimerSeq STARFusion TCGA RNA-Seq PLG-LPA PLG chr6 161152146 + LPA chr6 161020555 - Exonic hg19 Non-Cancer TCGA-DD-A3A2-11A 3 2489 Out-of-frame Intra-chr q26 q26 128733 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230311 - PZP chr12 9311065 - Exonic hg19 Non-Cancer TCGA-DD-A3A2-11A 5 30 Out-of-frame Intra-chr p13.31 p13.31 128734 ChimerSeq STARFusion TCGA RNA-Seq HPR-SERPINA1 HPR chr16 72110524 + SERPINA1 chr14 94845948 - Exonic hg19 Non-Cancer TCGA-DD-A3A2-11A 3 4 Out-of-frame Inter-chr q22.2 q32.13 128735 ChimerSeq STARFusion TCGA RNA-Seq F9-RNA45S5 F9 chrX 138645439 + RNA45S5 chrUn_gl000220 115690 + Exonic hg19 Non-Cancer TCGA-DD-A1EG-11A 3 6 Out-of-frame Inter-chr q27.1 128736 ChimerSeq STARFusion TCGA RNA-Seq COL4A1-RNA45S5 COL4A1 chr13 110959318 - RNA45S5 chrUn_gl000220 117592 + Exonic hg19 Non-Cancer TCGA-DD-A1EG-11A 3 1 Out-of-frame Inter-chr q34 128737 ChimerSeq STARFusion TCGA RNA-Seq SCARB1-UBC SCARB1 chr12 125348141 - UBC chr12 125398320 - Exonic hg19 Non-Cancer TCGA-DD-A11A-11A 2 5 CDS-5'UTR Intra-chr q24.31 q24.31 128738 ChimerSeq STARFusion TCGA RNA-Seq PLG-LPA PLG chr6 161152146 + LPA chr6 161020555 - Exonic hg19 Non-Cancer TCGA-DD-A114-11A 4 2124 Out-of-frame Intra-chr q26 q26 128739 ChimerSeq STARFusion TCGA RNA-Seq PLG-LPA PLG chr6 161173292 + LPA chr6 160952922 - Exonic hg19 Non-Cancer TCGA-DD-A114-11A 2 2124 In-Frame Intra-chr q26 q26 128740 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230311 - PZP chr12 9311065 - Exonic hg19 Non-Cancer TCGA-DD-A114-11A 6 19 Out-of-frame Intra-chr p13.31 p13.31 128741 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230305 - PZP chr12 9311059 - Exonic hg19 Non-Cancer TCGA-DD-A114-11A 5 19 Out-of-frame Intra-chr p13.31 p13.31 128742 ChimerSeq STARFusion TCGA RNA-Seq LOC100507053-ADH1B LOC100507053 chr4 100208045 + ADH1B chr4 100239258 - Exonic hg19 Non-Cancer TCGA-DD-A114-11A 5 11 Out-of-frame Intra-chr q23 128743 ChimerSeq STARFusion TCGA RNA-Seq BRI3BP-UBC BRI3BP chr12 125478549 + UBC chr12 125398320 - Exonic hg19 Non-Cancer TCGA-DD-A114-11A 2 1 CDS-5'UTR Intra-chr q24.31 q24.31 128744 ChimerSeq STARFusion TCGA RNA-Seq ITIH4-FGA ITIH4 chr3 52864569 - FGA chr4 155510714 - Exonic hg19 Non-Cancer TCGA-BC-A10Z-11A 2 14 In-Frame Inter-chr p21.1 q31.3 128745 ChimerSeq STARFusion TCGA RNA-Seq PLG-LPA PLG chr6 161152200 + LPA chr6 160998191 - Exonic hg19 Non-Cancer TCGA-DD-A116-11A 3 2760 Out-of-frame Intra-chr q26 q26 128746 ChimerSeq STARFusion TCGA RNA-Seq CLEC10A-ASGR2 CLEC10A chr17 6981301 - ASGR2 chr17 7011876 - Exonic hg19 Non-Cancer TCGA-DD-A116-11A 7 0 Out-of-frame Intra-chr p13.1 p13.1 128747 ChimerSeq STARFusion TCGA RNA-Seq A1BG-ITIH4 A1BG chr19 58862757 - ITIH4 chr3 52852299 - Exonic hg19 Non-Cancer TCGA-DD-A116-11A 2 3 In-Frame Inter-chr q13.43 p21.1 128748 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230305 - PZP chr12 9311059 - Exonic hg19 Non-Cancer TCGA-DD-A39V-11A 4 15 Out-of-frame Intra-chr p13.31 p13.31 128749 ChimerSeq STARFusion TCGA RNA-Seq LPA-PLG LPA chr6 160958887 - PLG chr6 161173147 + Exonic hg19 Non-Cancer TCGA-DD-A39V-11A 3 2 Out-of-frame Intra-chr q26 q26 128750 ChimerSeq STARFusion TCGA RNA-Seq HP-ALB HP chr16 72094799 + ALB chr4 74285328 + Exonic hg19 Non-Cancer TCGA-DD-A1EJ-11A 3 80 Out-of-frame Inter-chr q22.2 Tumor suppressor gene q13.3 128751 ChimerSeq STARFusion TCGA RNA-Seq PLG-LPA PLG chr6 161152154 + LPA chr6 161020547 - Exonic hg19 Non-Cancer TCGA-DD-A1EJ-11A 3 15 Out-of-frame Intra-chr q26 q26 128752 ChimerSeq STARFusion TCGA RNA-Seq RBP4-SERPINA1 RBP4 chr10 95353754 - SERPINA1 chr14 94849574 - Exonic hg19 Non-Cancer TCGA-DD-A1EJ-11A 3 4 Out-of-frame Inter-chr q23.33 q32.13 128753 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230311 - PZP chr12 9311065 - Exonic hg19 Non-Cancer TCGA-FV-A23B-11A 4 61 Out-of-frame Intra-chr p13.31 p13.31 128754 ChimerSeq STARFusion TCGA RNA-Seq ALB-ACAD9 ALB chr4 74280878 + ACAD9 chr3 128625005 + Exonic hg19 Non-Cancer TCGA-FV-A23B-11A 4 1 Out-of-frame Inter-chr q13.3 q21.3 128755 ChimerSeq STARFusion TCGA RNA-Seq C1S-HP C1S chr12 7175075 + HP chr16 72093013 + Exonic hg19 Non-Cancer TCGA-FV-A23B-11A 2 5 In-Frame Inter-chr p13.31 q22.2 Tumor suppressor gene 128756 ChimerSeq STARFusion TCGA RNA-Seq PLG-LPA PLG chr6 161152146 + LPA chr6 161020555 - Exonic hg19 Non-Cancer TCGA-DD-A1EL-11A 3 2913 Out-of-frame Intra-chr q26 q26 128757 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230305 - PZP chr12 9311059 - Exonic hg19 Non-Cancer TCGA-DD-A1EL-11A 4 8 Out-of-frame Intra-chr p13.31 p13.31 128758 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-DD-A1EL-11A 3 5 CDS-3'UTR Intra-chr q11.22 q22.2 128759 ChimerSeq STARFusion TCGA RNA-Seq FGB-ALDH2 FGB chr4 155487717 + ALDH2 chr12 112227639 + Exonic hg19 Non-Cancer TCGA-DD-A1EL-11A 3 1 Out-of-frame Inter-chr q31.3 q24.12 128760 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-DD-A11D-11A 3 3 CDS-3'UTR Intra-chr q11.22 q22.2 128761 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230305 - PZP chr12 9311059 - Exonic hg19 Non-Cancer TCGA-BC-A10R-11A 6 322 Out-of-frame Intra-chr p13.31 p13.31 128762 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230297 - PZP chr12 9310437 - Exonic hg19 Non-Cancer TCGA-BC-A10R-11A 2 322 In-Frame Intra-chr p13.31 p13.31 128763 ChimerSeq STARFusion TCGA RNA-Seq FGB-ALB FGB chr4 155484284 + ALB chr4 74285971 + Exonic hg19 Non-Cancer TCGA-BC-A10R-11A 2 78 In-Frame Intra-chr q31.3 q13.3 128764 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-BC-A10R-11A 3 3 CDS-3'UTR Intra-chr q11.22 q22.2 128765 ChimerSeq STARFusion TCGA RNA-Seq PLG-LPA PLG chr6 161134122 + LPA chr6 160978593 - Exonic hg19 Non-Cancer TCGA-ES-A2HT-11A 3 2319 Out-of-frame Intra-chr q26 q26 128766 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230311 - PZP chr12 9311065 - Exonic hg19 Non-Cancer TCGA-ES-A2HT-11A 11 19 Out-of-frame Intra-chr p13.31 p13.31 128767 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230305 - PZP chr12 9311059 - Exonic hg19 Non-Cancer TCGA-ES-A2HT-11A 5 19 Out-of-frame Intra-chr p13.31 p13.31 128768 ChimerSeq STARFusion TCGA RNA-Seq A1BG-ITIH4 A1BG chr19 58862757 - ITIH4 chr3 52852299 - Exonic hg19 Non-Cancer TCGA-ES-A2HT-11A 2 1 In-Frame Inter-chr q13.43 p21.1 128769 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677322 + IGLL5 chr22 23235961 + Exonic hg19 Non-Cancer TCGA-DD-A1EH-11A 3 15 Out-of-frame Intra-chr q11.22 128770 ChimerSeq STARFusion TCGA RNA-Seq PARP14-CYP2C8 PARP14 chr3 122439235 + CYP2C8 chr10 96827448 - Exonic hg19 Non-Cancer TCGA-DD-A1EH-11A 2 0 In-Frame Inter-chr q21.1 q23.33 128771 ChimerSeq STARFusion TCGA RNA-Seq A1BG-ITIH4 A1BG chr19 58862757 - ITIH4 chr3 52852299 - Exonic hg19 Non-Cancer TCGA-BD-A2L6-11A 2 2 In-Frame Inter-chr q13.43 p21.1 128772 ChimerSeq STARFusion TCGA RNA-Seq PLG-LPA PLG chr6 161152154 + LPA chr6 161020547 - Exonic hg19 Non-Cancer TCGA-BC-A216-11A 4 1337 Out-of-frame Intra-chr q26 q26 128773 ChimerSeq STARFusion TCGA RNA-Seq CXorf65-APOA2 CXorf65 chrX 70326461 - APOA2 chr1 161192257 - Exonic hg19 Non-Cancer TCGA-EP-A12J-11A 3 0 Out-of-frame Inter-chr q13.1 q23.3 128774 ChimerSeq STARFusion TCGA RNA-Seq ALB-ORM1 ALB chr4 74284010 + ORM1 chr9 117088613 + Exonic hg19 Non-Cancer TCGA-DD-A39W-11A 3 116 Out-of-frame Inter-chr q13.3 q32 128775 ChimerSeq STARFusion TCGA RNA-Seq PLG-LPA PLG chr6 161152154 + LPA chr6 161020547 - Exonic hg19 Non-Cancer TCGA-DD-A39W-11A 3 25 Out-of-frame Intra-chr q26 q26 128776 ChimerSeq STARFusion TCGA RNA-Seq ALB-ACAD9 ALB chr4 74280878 + ACAD9 chr3 128625005 + Exonic hg19 Non-Cancer TCGA-DD-A39W-11A 3 1 Out-of-frame Inter-chr q13.3 q21.3 128777 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677322 + IGLL5 chr22 23235961 + Exonic hg19 Non-Cancer TCGA-G3-A3CH-11A 4 132 Out-of-frame Intra-chr q11.22 128778 ChimerSeq STARFusion TCGA RNA-Seq ALB-ACAD9 ALB chr4 74280878 + ACAD9 chr3 128625005 + Exonic hg19 Non-Cancer TCGA-G3-A3CH-11A 3 1 Out-of-frame Inter-chr q13.3 q21.3 128779 ChimerSeq STARFusion TCGA RNA-Seq LPA-PLG LPA chr6 160958887 - PLG chr6 161173147 + Exonic hg19 Non-Cancer TCGA-BC-A10T-11A 9 2 Out-of-frame Intra-chr q26 q26 128780 ChimerSeq STARFusion TCGA RNA-Seq HP-RBP4 HP chr16 72090530 + RBP4 chr10 95353792 - Exonic hg19 Non-Cancer TCGA-BC-A10T-11A 2 15 In-Frame Inter-chr q22.2 Tumor suppressor gene q23.33 128781 ChimerSeq STARFusion TCGA RNA-Seq A1BG-FGA A1BG chr19 58864658 - FGA chr4 155508809 - Exonic hg19 Non-Cancer TCGA-BC-A10T-11A 2 3 In-Frame Inter-chr q13.43 q31.3 128782 ChimerSeq STARFusion TCGA RNA-Seq OSTF1-GPRC5C OSTF1 chr9 77703642 + GPRC5C chr17 72435884 + Exonic hg19 Non-Cancer TCGA-BC-A10T-11A 2 0 In-Frame Inter-chr q21.13 q25.1 128783 ChimerSeq STARFusion TCGA RNA-Seq PLG-LPA PLG chr6 161152146 + LPA chr6 161020555 - Exonic hg19 Non-Cancer TCGA-FV-A2QR-11A 5 932 Out-of-frame Intra-chr q26 q26 128784 ChimerSeq STARFusion TCGA RNA-Seq PLG-LPA PLG chr6 161152154 + LPA chr6 161020547 - Exonic hg19 Non-Cancer TCGA-FV-A2QR-11A 4 932 Out-of-frame Intra-chr q26 q26 128785 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9243797 - PZP chr12 9315244 - Exonic hg19 Non-Cancer TCGA-FV-A2QR-11A 2 20 In-Frame Intra-chr p13.31 p13.31 128786 ChimerSeq STARFusion TCGA RNA-Seq CLEC10A-ASGR2 CLEC10A chr17 6981301 - ASGR2 chr17 7011876 - Exonic hg19 Non-Cancer TCGA-DD-A1EB-11A 27 1 Out-of-frame Intra-chr p13.1 p13.1 128787 ChimerSeq STARFusion TCGA RNA-Seq LOC100507053-ADH1B LOC100507053 chr4 100208117 + ADH1B chr4 100240024 - Exonic hg19 Non-Cancer TCGA-DD-A1EB-11A 3 43 Out-of-frame Intra-chr q23 128788 ChimerSeq STARFusion TCGA RNA-Seq AMBP-TMEM176B AMBP chr9 116831979 - TMEM176B chr7 150491159 - Exonic hg19 Non-Cancer TCGA-DD-A1EB-11A 2 3 In-Frame Inter-chr q32 q36.1 128789 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230311 - PZP chr12 9311065 - Exonic hg19 Non-Cancer TCGA-DD-A1EE-11A 4 8 Out-of-frame Intra-chr p13.31 p13.31 128790 ChimerSeq STARFusion TCGA RNA-Seq A1BG-ITIH4 A1BG chr19 58862757 - ITIH4 chr3 52852299 - Exonic hg19 Non-Cancer TCGA-DD-A1EE-11A 3 1 In-Frame Inter-chr q13.43 p21.1 128791 ChimerSeq STARFusion TCGA RNA-Seq CLEC10A-ASGR2 CLEC10A chr17 6981301 - ASGR2 chr17 7011876 - Exonic hg19 Non-Cancer TCGA-BC-A10Q-11A 22 0 Out-of-frame Intra-chr p13.1 p13.1 128792 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-BC-A10Q-11A 3 2 CDS-3'UTR Intra-chr q11.22 q22.2 128793 ChimerSeq STARFusion TCGA RNA-Seq A1BG-ITIH4 A1BG chr19 58862757 - ITIH4 chr3 52852299 - Exonic hg19 Non-Cancer TCGA-BC-A10Q-11A 2 0 In-Frame Inter-chr q13.43 p21.1 128794 ChimerSeq STARFusion TCGA RNA-Seq ORM1-HP ORM1 chr9 117087508 + HP chr16 72088536 + Exonic hg19 Non-Cancer TCGA-BC-A110-11A 3 54 Out-of-frame Inter-chr q32 q22.2 Tumor suppressor gene 128795 ChimerSeq STARFusion TCGA RNA-Seq FBP1-FGG FBP1 chr9 97369174 - FGG chr4 155533042 - Exonic hg19 Non-Cancer TCGA-BC-A110-11A 3 3 Out-of-frame Inter-chr q22.32 Tumor suppressor gene q32.1 128796 ChimerSeq STARFusion TCGA RNA-Seq A1BG-ITIH4 A1BG chr19 58862757 - ITIH4 chr3 52852299 - Exonic hg19 Non-Cancer TCGA-BC-A110-11A 2 1 In-Frame Inter-chr q13.43 p21.1 128797 ChimerSeq STARFusion TCGA RNA-Seq LGI3-SFTPC LGI3 chr8 22004823 - SFTPC chr8 22021518 + Exonic hg19 Non-Cancer TCGA-73-4676-11A 3 1 Out-of-frame Intra-chr p21.3 p21.3 128798 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-55-6981-11A 3 2 Out-of-frame Inter-chr q13.13 p12.3 128799 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677322 + IGLL5 chr22 23235961 + Exonic hg19 Non-Cancer TCGA-55-6972-11A 32 327 Out-of-frame Intra-chr q11.22 128800 ChimerSeq STARFusion TCGA RNA-Seq CNRIP1-PPP3R1 CNRIP1 chr2 68544289 - PPP3R1 chr2 68444263 - Exonic hg19 Non-Cancer TCGA-55-6972-11A 2 0 In-Frame Intra-chr p14 p14 128801 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-50-5936-11A 2 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128802 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-55-6970-11A 3 12 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128803 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88029301 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-55-6970-11A 2 12 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128804 ChimerSeq STARFusion TCGA RNA-Seq SFTPC-FBRSL1 SFTPC chr8 22020204 + FBRSL1 chr12 133160276 + Exonic hg19 Non-Cancer TCGA-44-2662-11A 10 1 Out-of-frame Inter-chr p21.3 q24.33 128805 ChimerSeq STARFusion TCGA RNA-Seq LGI3-SFTPC LGI3 chr8 22004823 - SFTPC chr8 22021518 + Exonic hg19 Non-Cancer TCGA-44-2662-11A 5 2 Out-of-frame Intra-chr p21.3 p21.3 128806 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-44-2662-11A 3 1 CDS-5'UTR Intra-chr q21.31 128807 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-44-2662-11A 2 5 3'UTR-5'UTR Intra-chr q12.1 128808 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-44-2662-11A 2 5 3'UTR-CDS Intra-chr p15.4 128809 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-44-2662-11A 3 0 3'UTR-3'UTR Intra-chr 128810 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-44-2662-11A 2 3 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128811 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677321 + IGLL5 chr22 23235966 + Exonic hg19 Non-Cancer TCGA-44-2657-11A 24 3007 Out-of-frame Intra-chr q11.22 128812 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230305 - PZP chr12 9311059 - Exonic hg19 Non-Cancer TCGA-44-2657-11A 4 6 Out-of-frame Intra-chr p13.31 p13.31 128813 ChimerSeq STARFusion TCGA RNA-Seq NFYC-LOC494127 NFYC chr1 41232375 + LOC494127 chr9 89699278 - Exonic hg19 Non-Cancer TCGA-44-2657-11A 4 1 CDS-3'UTR Inter-chr p34.2 Transcription factor 128814 ChimerSeq STARFusion TCGA RNA-Seq LGI3-SFTPC LGI3 chr8 22004823 - SFTPC chr8 22021518 + Exonic hg19 Non-Cancer TCGA-44-2657-11A 3 3 Out-of-frame Intra-chr p21.3 p21.3 128815 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-44-2657-11A 2 2 3'UTR-5'UTR Intra-chr q12.1 128816 ChimerSeq STARFusion TCGA RNA-Seq SFTPA2-MSL1 SFTPA2 chr10 81319725 - MSL1 chr17 38278920 + Exonic hg19 Non-Cancer TCGA-55-6968-11A 11 1 Out-of-frame Inter-chr q22.3 q21.1 128817 ChimerSeq STARFusion TCGA RNA-Seq LOC728606-KCTD1 LOC728606 chr18 24283356 - KCTD1 chr18 24081214 - Exonic hg19 Non-Cancer TCGA-55-6968-11A 2 0 3'UTR-CDS Intra-chr q11.2 128818 ChimerSeq STARFusion TCGA RNA-Seq EDARADD-ENO1 EDARADD chr1 236647127 + ENO1 chr1 8926377 - Exonic hg19 Non-Cancer TCGA-44-2668-11A 3 10 Out-of-frame Intra-chr q42.3 p36.23 128819 ChimerSeq STARFusion TCGA RNA-Seq PRKCH-FLJ22447 PRKCH chr14 61997313 + FLJ22447 chr14 62117680 + Exonic hg19 Non-Cancer TCGA-55-6971-11A 4 0 CDS-5'UTR Intra-chr q23.1 q23.1 128820 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230311 - PZP chr12 9311065 - Exonic hg19 Non-Cancer TCGA-55-6971-11A 3 2 Out-of-frame Intra-chr p13.31 p13.31 128821 ChimerSeq STARFusion TCGA RNA-Seq EIF2B1-SFTPC EIF2B1 chr12 124105936 - SFTPC chr8 22021031 + Exonic hg19 Non-Cancer TCGA-55-6971-11A 3 1 Out-of-frame Inter-chr q24.31 p21.3 128822 ChimerSeq STARFusion TCGA RNA-Seq SYT15-ZCCHC8 SYT15 chr10 46959944 - ZCCHC8 chr12 122957364 - Exonic hg19 Non-Cancer TCGA-55-6971-11A 3 0 Out-of-frame Inter-chr q11.22 q24.31 128823 ChimerSeq STARFusion TCGA RNA-Seq SFTPA2-MSL1 SFTPA2 chr10 81319725 - MSL1 chr17 38278920 + Exonic hg19 Non-Cancer TCGA-44-2655-11A 12 1 Out-of-frame Inter-chr q22.3 q21.1 128824 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230305 - PZP chr12 9311059 - Exonic hg19 Non-Cancer TCGA-44-2655-11A 3 26 Out-of-frame Intra-chr p13.31 p13.31 128825 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-50-5932-11A 3 3 3'UTR-5'UTR Intra-chr q12.1 128826 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-50-5932-11A 2 2 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128827 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-44-6148-11A 2 10 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128828 ChimerSeq STARFusion TCGA RNA-Seq SFTPA2-MSL1 SFTPA2 chr10 81319725 - MSL1 chr17 38278920 + Exonic hg19 Non-Cancer TCGA-55-6985-11A 6 3 Out-of-frame Inter-chr q22.3 q21.1 128829 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-55-6985-11A 2 12 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128830 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-55-6985-11A 4 1 CDS-5'UTR Intra-chr q21.31 128831 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-55-6985-11A 4 0 3'UTR-3'UTR Intra-chr 128832 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-55-6985-11A 2 8 3'UTR-CDS Intra-chr p15.4 128833 ChimerSeq STARFusion TCGA RNA-Seq EDARADD-ENO1 EDARADD chr1 236647127 + ENO1 chr1 8926377 - Exonic hg19 Non-Cancer TCGA-55-6985-11A 3 1 Out-of-frame Intra-chr q42.3 p36.23 128834 ChimerSeq STARFusion TCGA RNA-Seq PRKCH-FLJ22447 PRKCH chr14 61997313 + FLJ22447 chr14 62117680 + Exonic hg19 Non-Cancer TCGA-55-6985-11A 2 1 CDS-5'UTR Intra-chr q23.1 q23.1 128835 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-91-6836-11A 2 8 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128836 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-91-6836-11A 2 3 3'UTR-CDS Intra-chr p15.4 128837 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-55-6984-11A 2 14 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128838 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230311 - PZP chr12 9311065 - Exonic hg19 Non-Cancer TCGA-55-6984-11A 4 5 Out-of-frame Intra-chr p13.31 p13.31 128839 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-55-6984-11A 3 5 Out-of-frame Inter-chr q13.13 p12.3 128840 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-55-6984-11A 3 5 Out-of-frame Inter-chr q13.13 p12.3 128841 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-55-6984-11A 3 1 3'UTR-5'UTR Intra-chr q12.1 128842 ChimerSeq STARFusion TCGA RNA-Seq WFS1-TMEM245 WFS1 chr4 6304987 + TMEM245 chr9 111778963 - Exonic hg19 Non-Cancer TCGA-55-6984-11A 3 1 Out-of-frame Inter-chr p16.1 q31.3 128843 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-49-6744-11A 2 8 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128844 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-49-6744-11A 2 2 3'UTR-5'UTR Intra-chr q12.1 128845 ChimerSeq STARFusion TCGA RNA-Seq MAPKAPK5-ACAD10 MAPKAPK5 chr12 112308984 + ACAD10 chr12 112182447 + Exonic hg19 Non-Cancer TCGA-50-6595-11A 2 18 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 KB Pub Seq+ 128846 ChimerSeq STARFusion TCGA RNA-Seq SFTPA2-MSL1 SFTPA2 chr10 81319725 - MSL1 chr17 38278920 + Exonic hg19 Non-Cancer TCGA-50-6595-11A 5 1 Out-of-frame Inter-chr q22.3 q21.1 128847 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-50-6595-11A 2 1 CDS-5'UTR Intra-chr q21.31 128848 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-50-6595-11A 2 0 3'UTR-3'UTR Intra-chr 128849 ChimerSeq STARFusion TCGA RNA-Seq SFTPB-SCGB1A1 SFTPB chr2 85892412 - SCGB1A1 chr11 62190531 + Exonic hg19 Non-Cancer TCGA-91-6835-11A 2 8 Out-of-frame Inter-chr p11.2 q12.3 128850 ChimerSeq STARFusion TCGA RNA-Seq AGBL4-BEND5 AGBL4 chr1 49332863 - BEND5 chr1 49224956 - Exonic hg19 Non-Cancer TCGA-91-6835-11A 2 1 Out-of-frame Intra-chr p33 p33 128851 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230305 - PZP chr12 9311059 - Exonic hg19 Non-Cancer TCGA-38-4627-11A 4 12 Out-of-frame Intra-chr p13.31 p13.31 128852 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-44-5645-11A 3 6 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128853 ChimerSeq STARFusion TCGA RNA-Seq SAV1-GYPE SAV1 chr14 51131897 - GYPE chr4 144801662 - Exonic hg19 Non-Cancer TCGA-44-5645-11A 2 0 In-Frame Inter-chr q22.1 q31.21 128854 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-44-6144-11A 2 10 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128855 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-44-6144-11A 2 7 3'UTR-CDS Intra-chr p15.4 128856 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-44-6144-11A 3 1 CDS-5'UTR Intra-chr q21.31 128857 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-38-4625-11A 3 18 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128858 ChimerSeq STARFusion TCGA RNA-Seq LGI3-SFTPC LGI3 chr8 22004823 - SFTPC chr8 22021518 + Exonic hg19 Non-Cancer TCGA-38-4625-11A 4 3 Out-of-frame Intra-chr p21.3 p21.3 128859 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-38-4625-11A 2 4 3'UTR-CDS Intra-chr p15.4 128860 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-38-4625-11A 3 0 Out-of-frame Inter-chr q11.2 p22.11 128861 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-38-4625-11A 2 3 3'UTR-5'UTR Intra-chr q12.1 128862 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677321 + IGLL5 chr22 23235960 + Exonic hg19 Non-Cancer TCGA-49-6742-11A 3 74 Out-of-frame Intra-chr q11.22 128863 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-49-6742-11A 3 15 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128864 ChimerSeq STARFusion TCGA RNA-Seq NFYC-LOC494127 NFYC chr1 41232375 + LOC494127 chr9 89699278 - Exonic hg19 Non-Cancer TCGA-49-6742-11A 3 1 CDS-3'UTR Inter-chr p34.2 Transcription factor 128865 ChimerSeq STARFusion TCGA RNA-Seq HERC4-HNRNPH3 HERC4 chr10 69714352 - HNRNPH3 chr10 70096956 + Exonic hg19 Non-Cancer TCGA-49-6742-11A 2 1 Out-of-frame Intra-chr q21.3 q21.3 128866 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-49-4490-11A 3 3 Out-of-frame Inter-chr q13.13 p12.3 128867 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-49-4490-11A 2 2 3'UTR-5'UTR Intra-chr q12.1 128868 ChimerSeq STARFusion TCGA RNA-Seq RNA45S5-FTH1 RNA45S5 chrUn_gl000220 115490 + FTH1 chr11 61734921 - Exonic hg19 Non-Cancer TCGA-55-6983-11A 5 9 Out-of-frame Inter-chr q12.3 128869 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-55-6983-11A 3 7 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128870 ChimerSeq STARFusion TCGA RNA-Seq SFTPA1-NRIP3 SFTPA1 chr10 81375186 + NRIP3 chr11 9004402 - Exonic hg19 Non-Cancer TCGA-55-6983-11A 3 0 Out-of-frame Inter-chr q22.3 p15.4 128871 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-55-6983-11A 2 3 3'UTR-CDS Intra-chr p15.4 128872 ChimerSeq STARFusion TCGA RNA-Seq SFTPC-SCGB1A1 SFTPC chr8 22021009 + SCGB1A1 chr11 62186547 + Exonic hg19 Non-Cancer TCGA-55-6986-11A 3 54 Out-of-frame Inter-chr p21.3 q12.3 128873 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-55-6986-11A 6 3 Out-of-frame Inter-chr q13.13 p12.3 128874 ChimerSeq STARFusion TCGA RNA-Seq RNA45S5-FTH1 RNA45S5 chrUn_gl000220 115492 + FTH1 chr11 61734919 - Exonic hg19 Non-Cancer TCGA-55-6986-11A 3 10 Out-of-frame Inter-chr q12.3 128875 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-55-6986-11A 2 10 3'UTR-CDS Intra-chr p15.4 128876 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-55-6986-11A 4 0 Out-of-frame Inter-chr q11.2 p22.11 128877 ChimerSeq STARFusion TCGA RNA-Seq VIM-RPPH1 VIM chr10 17279576 + RPPH1 chr14 20811232 - Exonic hg19 Non-Cancer TCGA-55-6986-11A 3 4 Out-of-frame Inter-chr p13 Tumor suppressor gene q11.2 128878 ChimerSeq STARFusion TCGA RNA-Seq PRKCH-FLJ22447 PRKCH chr14 61997313 + FLJ22447 chr14 62117680 + Exonic hg19 Non-Cancer TCGA-55-6986-11A 2 7 CDS-5'UTR Intra-chr q23.1 q23.1 128879 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-55-6986-11A 2 3 CDS-5'UTR Intra-chr q21.31 128880 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-55-6986-11A 2 2 3'UTR-3'UTR Intra-chr 128881 ChimerSeq STARFusion TCGA RNA-Seq SOCS5-LOC100134259 SOCS5 chr2 46926588 + LOC100134259 chr2 47083062 + Exonic hg19 Non-Cancer TCGA-55-6986-11A 2 1 5'UTR-5'UTR Intra-chr p21 128882 ChimerSeq STARFusion TCGA RNA-Seq LGI3-SFTPC LGI3 chr8 22004823 - SFTPC chr8 22021518 + Exonic hg19 Non-Cancer TCGA-44-2665-11A 8 3 Out-of-frame Intra-chr p21.3 p21.3 128883 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-44-2665-11A 4 16 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128884 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854180 - CBX3 chr7 26241365 + Exonic hg19 Non-Cancer TCGA-44-2665-11A 3 12 Out-of-frame Inter-chr q15.1 p15.2 128885 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230311 - PZP chr12 9311065 - Exonic hg19 Non-Cancer TCGA-44-2665-11A 4 7 Out-of-frame Intra-chr p13.31 p13.31 128886 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230305 - PZP chr12 9311059 - Exonic hg19 Non-Cancer TCGA-44-2665-11A 4 7 Out-of-frame Intra-chr p13.31 p13.31 128887 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-44-2665-11A 2 3 3'UTR-5'UTR Intra-chr q12.1 128888 ChimerSeq STARFusion TCGA RNA-Seq SFTPB-UBA1 SFTPB chr2 85894802 - UBA1 chrX 47074193 + Exonic hg19 Non-Cancer TCGA-44-2665-11A 2 2 Out-of-frame Inter-chr p11.2 p11.3 128889 ChimerSeq STARFusion TCGA RNA-Seq SFTPA2-MSL1 SFTPA2 chr10 81319725 - MSL1 chr17 38278920 + Exonic hg19 Non-Cancer TCGA-50-5930-11A 11 1 Out-of-frame Inter-chr q22.3 q21.1 128890 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-50-5930-11A 4 1 Out-of-frame Inter-chr q13.13 p12.3 128891 ChimerSeq STARFusion TCGA RNA-Seq PRKCH-FLJ22447 PRKCH chr14 61997313 + FLJ22447 chr14 62117680 + Exonic hg19 Non-Cancer TCGA-50-5930-11A 2 1 CDS-5'UTR Intra-chr q23.1 q23.1 128892 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-50-5935-11A 3 2 Out-of-frame Inter-chr q13.13 p12.3 128893 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-38-4626-11A 4 8 3'UTR-CDS Intra-chr p15.4 128894 ChimerSeq STARFusion TCGA RNA-Seq SFTPA1-SESN1 SFTPA1 chr10 81374260 + SESN1 chr6 109307879 - Exonic hg19 Non-Cancer TCGA-38-4626-11A 5 1 Out-of-frame Inter-chr q22.3 q21 128895 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-38-4626-11A 2 6 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128896 ChimerSeq STARFusion TCGA RNA-Seq TET2-PPA2 TET2 chr4 106111662 + PPA2 chr4 106320321 - Exonic hg19 Non-Cancer TCGA-38-4626-11A 2 1 5'UTR-CDS Intra-chr q24 Oncogene Tumor suppressor gene Transcription factor q24 128897 ChimerSeq STARFusion TCGA RNA-Seq RNA45S5-FTH1 RNA45S5 chrUn_gl000220 115490 + FTH1 chr11 61734921 - Exonic hg19 Non-Cancer TCGA-91-6829-11A 3 6 Out-of-frame Inter-chr q12.3 128898 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-38-4632-11A 2 10 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128899 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-44-6778-11A 2 10 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128900 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-55-6980-11A 2 1 CDS-5'UTR Intra-chr q21.31 128901 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-55-6980-11A 2 1 3'UTR-3'UTR Intra-chr 128902 ChimerSeq STARFusion TCGA RNA-Seq TANC1-DAPL1 TANC1 chr2 159922483 + DAPL1 chr2 159660794 + Exonic hg19 Non-Cancer TCGA-55-6969-11A 4 47 In-Frame Intra-chr q24.2 q24.1 128903 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-55-6969-11A 2 9 3'UTR-CDS Intra-chr p15.4 128904 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-55-6969-11A 3 2 CDS-5'UTR Intra-chr q21.31 128905 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-55-6969-11A 3 2 3'UTR-3'UTR Intra-chr 128906 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-91-6828-11A 4 4 3'UTR-CDS Intra-chr p15.4 128907 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-91-6828-11A 2 7 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128908 ChimerSeq STARFusion TCGA RNA-Seq CHST9-AQP4 CHST9 chr18 24604080 - AQP4 chr18 24442560 - Exonic hg19 Non-Cancer TCGA-91-6828-11A 2 1 Out-of-frame Intra-chr q11.2 q11.2 128909 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-50-5933-11A 3 2 3'UTR-5'UTR Intra-chr q12.1 128910 ChimerSeq STARFusion TCGA RNA-Seq PRKCH-FLJ22447 PRKCH chr14 61997313 + FLJ22447 chr14 62117680 + Exonic hg19 Non-Cancer TCGA-50-5933-11A 2 5 CDS-5'UTR Intra-chr q23.1 q23.1 128911 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-50-5933-11A 2 4 3'UTR-CDS Intra-chr p15.4 128912 ChimerSeq STARFusion TCGA RNA-Seq YWHAE-CRK YWHAE chr17 1303341 - CRK chr17 1340449 - Exonic hg19 Non-Cancer TCGA-50-5933-11A 2 2 In-Frame Intra-chr p13.3 p13.3 128913 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-49-6743-11A 2 4 3'UTR-5'UTR Intra-chr q12.1 128914 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-49-6743-11A 2 1 3'UTR-CDS Intra-chr p15.4 128915 ChimerSeq STARFusion TCGA RNA-Seq SAV1-GYPE SAV1 chr14 51131897 - GYPE chr4 144801662 - Exonic hg19 Non-Cancer TCGA-49-6743-11A 2 0 In-Frame Inter-chr q22.1 q31.21 128916 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-49-6761-11A 3 3 Out-of-frame Inter-chr q13.13 p12.3 128917 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-44-2661-11A 2 6 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128918 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-91-6849-11A 3 2 Out-of-frame Inter-chr q13.13 p12.3 128919 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-91-6849-11A 2 3 3'UTR-CDS Intra-chr p15.4 128920 ChimerSeq STARFusion TCGA RNA-Seq RNA45S5-FTH1 RNA45S5 chrUn_gl000220 115492 + FTH1 chr11 61734919 - Exonic hg19 Non-Cancer TCGA-50-5931-11A 3 3 Out-of-frame Inter-chr q12.3 128921 ChimerSeq STARFusion TCGA RNA-Seq SFTPA2-MSL1 SFTPA2 chr10 81319725 - MSL1 chr17 38278920 + Exonic hg19 Non-Cancer TCGA-55-6979-11A 7 1 Out-of-frame Inter-chr q22.3 q21.1 128922 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-44-6147-11A 2 4 3'UTR-5'UTR Intra-chr q12.1 128923 ChimerSeq STARFusion TCGA RNA-Seq SFTPA2-FGF23 SFTPA2 chr10 81315652 - FGF23 chr12 4479177 - Exonic hg19 Non-Cancer TCGA-55-6975-11A 3 6 Out-of-frame Inter-chr q22.3 p13.32 128924 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-55-6975-11A 3 2 Out-of-frame Inter-chr q13.13 p12.3 128925 ChimerSeq STARFusion TCGA RNA-Seq SAV1-GYPE SAV1 chr14 51131897 - GYPE chr4 144801662 - Exonic hg19 Non-Cancer TCGA-44-6776-11A 2 0 In-Frame Inter-chr q22.1 q31.21 128926 ChimerSeq STARFusion TCGA RNA-Seq LOC729852-GLCCI1 LOC729852 chr7 7841374 + GLCCI1 chr7 8043538 + Exonic hg19 Non-Cancer TCGA-44-6146-11A 2 2 5'UTR-CDS Intra-chr p21.3 128927 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-44-6146-11A 2 0 3'UTR-5'UTR Intra-chr q12.1 128928 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230311 - PZP chr12 9311065 - Exonic hg19 Non-Cancer TCGA-44-3396-11A 4 32 Out-of-frame Intra-chr p13.31 p13.31 128929 ChimerSeq STARFusion TCGA RNA-Seq A2M-PZP A2M chr12 9230305 - PZP chr12 9311059 - Exonic hg19 Non-Cancer TCGA-44-3396-11A 3 32 Out-of-frame Intra-chr p13.31 p13.31 128930 ChimerSeq STARFusion TCGA RNA-Seq RNA45S5-FTH1 RNA45S5 chrUn_gl000220 115490 + FTH1 chr11 61734921 - Exonic hg19 Non-Cancer TCGA-44-3396-11A 6 7 Out-of-frame Inter-chr q12.3 128931 ChimerSeq STARFusion TCGA RNA-Seq ENO1-EDARADD ENO1 chr1 8926346 - EDARADD chr1 236647061 + Exonic hg19 Non-Cancer TCGA-44-3396-11A 3 12 Out-of-frame Intra-chr p36.23 q42.3 128932 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-44-3396-11A 3 5 3'UTR-5'UTR Intra-chr q12.1 128933 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-44-3396-11A 4 0 Out-of-frame Inter-chr q11.2 p22.11 128934 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-44-3396-11A 3 1 CDS-5'UTR Intra-chr q21.31 128935 ChimerSeq STARFusion TCGA RNA-Seq LGI3-SFTPC LGI3 chr8 22004823 - SFTPC chr8 22021518 + Exonic hg19 Non-Cancer TCGA-49-6745-11A 3 1 Out-of-frame Intra-chr p21.3 p21.3 128936 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-49-6745-11A 3 1 Out-of-frame Inter-chr q13.13 p12.3 128937 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-49-6745-11A 2 4 3'UTR-CDS Intra-chr p15.4 128938 ChimerSeq STARFusion TCGA RNA-Seq LOC100507632-PENK LOC100507632 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-49-6745-11A 2 3 3'UTR-5'UTR Intra-chr q12.1 128939 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-91-6847-11A 4 4 Out-of-frame Inter-chr q13.13 p12.3 128940 ChimerSeq STARFusion TCGA RNA-Seq LOC283299-OVCH2 LOC283299 chr11 7900554 - OVCH2 chr11 7726221 - Exonic hg19 Non-Cancer TCGA-91-6847-11A 2 2 3'UTR-CDS Intra-chr p15.4 128941 ChimerSeq STARFusion TCGA RNA-Seq SCARB1-UBC SCARB1 chr12 125348141 - UBC chr12 125398320 - Exonic hg19 Non-Cancer TCGA-SQ-A6I4-11A 2 10 CDS-5'UTR Intra-chr q24.31 q24.31 128942 ChimerSeq STARFusion TCGA RNA-Seq IGSF5-PCP4 IGSF5 chr21 41165540 + PCP4 chr21 41270401 + Exonic hg19 Non-Cancer TCGA-SQ-A6I4-11A 2 7 In-Frame Intra-chr q22.2 q22.2 128943 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-SQ-A6I4-11A 2 0 CDS-5'UTR Intra-chr q21.31 128944 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-SQ-A6I4-11A 2 0 3'UTR-3'UTR Intra-chr 128945 ChimerSeq STARFusion TCGA RNA-Seq CYP17A1-INTS8 CYP17A1 chr10 104596822 - INTS8 chr8 95861690 + Exonic hg19 Non-Cancer TCGA-P8-A5KD-11A 2 1 Out-of-frame Inter-chr q24.32 q22.1 128946 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-P8-A5KC-11A 3 7 Out-of-frame Intra-chr q11.22 q11.23 128947 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-P8-A5KC-11A 3 5 Out-of-frame Intra-chr q11.22 q11.22 128948 ChimerSeq STARFusion TCGA RNA-Seq ASH2L-MTND4P12 ASH2L chr8 38001472 + MTND4P12 chr5 134262847 - Exonic hg19 Non-Cancer TCGA-P8-A5KC-11A 3 4 Out-of-frame Inter-chr p11.23 q31.1 128949 ChimerSeq STARFusion TCGA RNA-Seq EEF2-SMARCA4 EEF2 chr19 3982805 - SMARCA4 chr19 11151983 + Exonic hg19 Non-Cancer TCGA-K1-A3PO-11A 5 19 Out-of-frame Intra-chr p13.3 p13.2 Oncogene Tumor suppressor gene 128950 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-K1-A3PO-11A 4 4 3'UTR-3'UTR Intra-chr 128951 ChimerSeq STARFusion TCGA RNA-Seq ACAP3-SMTN ACAP3 chr1 1242452 - SMTN chr22 31493255 + Exonic hg19 Non-Cancer TCGA-K1-A3PO-11A 2 1 Out-of-frame Inter-chr p36.33 q12.2 128952 ChimerSeq STARFusion TCGA RNA-Seq IGH@-FAU IGH@ chr14 106967319 - FAU chr11 64889206 - Exonic hg19 Non-Cancer TCGA-GN-A4U8-11A 121 3 Out-of-frame Inter-chr 32.33 q13.1 128953 ChimerSeq STARFusion TCGA RNA-Seq NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer TCGA-GN-A4U8-11A 13 1 Out-of-frame Intra-chr p11.2 128954 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-GN-A4U8-11A 13 0 Out-of-frame Inter-chr q11.2 p22.11 128955 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-GN-A4U8-11A 7 5 Out-of-frame Inter-chr q13.13 p12.3 128956 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-GN-A4U8-11A 5 13 Out-of-frame Intra-chr q11.22 q11.23 128957 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-GN-A4U8-11A 5 5 Out-of-frame Intra-chr q11.22 q11.22 128958 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-GN-A4U8-11A 2 15 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128959 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88029301 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-GN-A4U8-11A 2 15 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 128960 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-GN-A4U8-11A 3 5 Out-of-frame Inter-chr q13.13 p12.3 128961 ChimerSeq STARFusion TCGA RNA-Seq IGJP1-ENAM IGJP1 chr8 85892498 - ENAM chr4 71522969 + Exonic hg19 Non-Cancer TCGA-CG-5733-11A 21 0 Out-of-frame Inter-chr q21.2 q13.3 128962 ChimerSeq STARFusion TCGA RNA-Seq ADAL-IGLJ3 ADAL chr15 43645888 + IGLJ3 chr22 23247170 + Exonic hg19 Non-Cancer TCGA-CG-5733-11A 15 0 Out-of-frame Inter-chr q15.3 q11.22 128963 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-CG-5733-11A 11 0 Out-of-frame Inter-chr q21 q13.42 128964 ChimerSeq STARFusion TCGA RNA-Seq IGJ-FGF23 IGJ chr4 71521266 - FGF23 chr12 4479175 - Exonic hg19 Non-Cancer TCGA-CG-5733-11A 9 0 Out-of-frame Inter-chr p13.32 128965 ChimerSeq STARFusion TCGA RNA-Seq IGKJ4-IGLC3 IGKJ4 chr2 89160398 - IGLC3 chr22 23248512 + Exonic hg19 Non-Cancer TCGA-CG-5733-11A 8 0 Out-of-frame Inter-chr p11.2 q11.22 128966 ChimerSeq STARFusion TCGA RNA-Seq HCFC1-IGHA1 HCFC1 chrX 153222119 - IGHA1 chr14 106175002 - Exonic hg19 Non-Cancer TCGA-CG-5733-11A 7 0 Out-of-frame Inter-chr q28 128967 ChimerSeq STARFusion TCGA RNA-Seq IGHA1-PGA3 IGHA1 chr14 106174187 - PGA3 chr11 60970989 + Exonic hg19 Non-Cancer TCGA-CG-5733-11A 6 1 Out-of-frame Inter-chr q12.2 128968 ChimerSeq STARFusion TCGA RNA-Seq DDX17-KDELR3 DDX17 chr22 38879481 - KDELR3 chr22 38879442 + Exonic hg19 Non-Cancer TCGA-CG-5733-11A 3 1 Out-of-frame Intra-chr q13.1 q13.1 128969 ChimerSeq STARFusion TCGA RNA-Seq MIPEPP3-ABHD12 MIPEPP3 chr13 21872464 + ABHD12 chr20 25371382 - Exonic hg19 Non-Cancer TCGA-CG-5733-11A 3 0 Out-of-frame Inter-chr q12.11 p11.21 128970 ChimerSeq STARFusion TCGA RNA-Seq MUC5AC-RGS5 MUC5AC chr11 1222353 + RGS5 chr1 163116056 - Exonic hg19 Non-Cancer TCGA-CG-5733-11A 3 0 Out-of-frame Inter-chr q23.3 128971 ChimerSeq STARFusion TCGA RNA-Seq TUBGCP4-IGHJ4 TUBGCP4 chr15 43699073 + IGHJ4 chr14 106330467 - Exonic hg19 Non-Cancer TCGA-CG-5733-11A 3 0 Out-of-frame Inter-chr q15.3 128972 ChimerSeq STARFusion TCGA RNA-Seq DAB1-GORASP2 DAB1 chr1 58971732 - GORASP2 chr2 171804860 + Exonic hg19 Non-Cancer TCGA-CG-5733-11A 2 0 Out-of-frame Inter-chr p32.1 q31.1 128973 ChimerSeq STARFusion TCGA RNA-Seq GATAD2B-RNF115 GATAD2B chr1 153895209 - RNF115 chr1 145663159 + Exonic hg19 Non-Cancer TCGA-CG-5733-11A 2 0 Out-of-frame Intra-chr Transcription factor q21.1 128974 ChimerSeq STARFusion TCGA RNA-Seq GSTT1-CYP3A5 GSTT1 chr22 24381700 - CYP3A5 chr7 99250402 - Exonic hg19 Non-Cancer TCGA-CG-5733-11A 2 0 Out-of-frame Inter-chr Tumor suppressor gene q22.1 128975 ChimerSeq STARFusion TCGA RNA-Seq IGHJ4-TUBGCP6 IGHJ4 chr14 106330425 - TUBGCP6 chr22 50658444 - Exonic hg19 Non-Cancer TCGA-CG-5733-11A 2 0 Out-of-frame Inter-chr q13.33 128976 ChimerSeq STARFusion TCGA RNA-Seq NUMB-NHLRC3 NUMB chr14 73925199 - NHLRC3 chr13 39621177 + Exonic hg19 Non-Cancer TCGA-CG-5733-11A 2 0 Out-of-frame Inter-chr q24.3 Tumor suppressor gene q13.3 128977 ChimerSeq STARFusion TCGA RNA-Seq OMA1-GORASP2 OMA1 chr1 58971732 - GORASP2 chr2 171804860 + Exonic hg19 Non-Cancer TCGA-CG-5733-11A 2 0 Out-of-frame Inter-chr p32.1 q31.1 128978 ChimerSeq STARFusion TCGA RNA-Seq PDS5A-SMIM14 PDS5A chr4 39978060 - SMIM14 chr4 39553778 - Exonic hg19 Non-Cancer TCGA-CG-5733-11A 2 0 Out-of-frame Intra-chr p14 p14 128979 ChimerSeq STARFusion TCGA RNA-Seq PRRC2B-PDS5A PRRC2B chr9 134343140 + PDS5A chr4 39927553 - Exonic hg19 Non-Cancer TCGA-CG-5733-11A 2 0 In-Frame Inter-chr q34.13 p14 128980 ChimerSeq STARFusion TCGA RNA-Seq RGS12-CLIP1 RGS12 chr4 3344780 + CLIP1 chr12 122865105 - Exonic hg19 Non-Cancer TCGA-CG-5733-11A 2 0 CDS-5'UTR Inter-chr p16.3 q24.31 128981 ChimerSeq STARFusion TCGA RNA-Seq TSPAN3-REEP1 TSPAN3 chr15 77363234 - REEP1 chr2 86444233 - Exonic hg19 Non-Cancer TCGA-CG-5733-11A 2 0 In-Frame Inter-chr q24.3 p11.2 128982 ChimerSeq STARFusion TCGA RNA-Seq U3-KCTD1 U3 chr18 24283356 - KCTD1 chr18 24081214 - Exonic hg19 Non-Cancer TCGA-CG-5733-11A 2 0 Out-of-frame Intra-chr q11.2 128983 ChimerSeq STARFusion TCGA RNA-Seq U3-KCTD1 U3 chr18 24283356 - KCTD1 chr18 24161693 - Exonic hg19 Non-Cancer TCGA-CG-5733-11A 2 0 Out-of-frame Intra-chr q11.2 128984 ChimerSeq STARFusion TCGA RNA-Seq KRT8P4-DES KRT8P4 chr8 90425097 - DES chr2 220288498 + Exonic hg19 Non-Cancer TCGA-FP-7735-11A 227 0 Out-of-frame Inter-chr q21.3 q35 128985 ChimerSeq STARFusion TCGA RNA-Seq GATSL2-GTF2I GATSL2 chr7 74867229 - GTF2I chr7 74143124 + Exonic hg19 Non-Cancer TCGA-FP-7735-11A 2 81 Out-of-frame Intra-chr q11.23 Transcription factor 128986 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-FP-7735-11A 16 4 Out-of-frame Intra-chr q11.22 q11.23 128987 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-FP-7735-11A 16 4 Out-of-frame Intra-chr q11.22 q11.22 128988 ChimerSeq STARFusion TCGA RNA-Seq NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer TCGA-FP-7735-11A 15 0 Out-of-frame Intra-chr p11.2 128989 ChimerSeq STARFusion TCGA RNA-Seq ACTG2-MYH11 ACTG2 chr2 74140770 + MYH11 chr16 15835362 - Exonic hg19 Non-Cancer TCGA-FP-7735-11A 3 18 Out-of-frame Inter-chr p13.1 Oncogene 128990 ChimerSeq STARFusion TCGA RNA-Seq MYH11-MYL9 MYH11 chr16 15820749 - MYL9 chr20 35169936 + Exonic hg19 Non-Cancer TCGA-FP-7735-11A 4 10 Out-of-frame Inter-chr Oncogene q11.23 128991 ChimerSeq STARFusion TCGA RNA-Seq DHRSX-IGH@ DHRSX chrX 2184826 - IGH@ chr14 106175000 - Exonic hg19 Non-Cancer TCGA-BR-7716-11A 321 0 Out-of-frame Inter-chr p22.33 32.33 128992 ChimerSeq STARFusion TCGA RNA-Seq DHRSX-IGHA1 DHRSX chrY 2134826 - IGHA1 chr14 106175000 - Exonic hg19 Non-Cancer TCGA-BR-7716-11A 321 0 Out-of-frame Inter-chr p22.33 128993 ChimerSeq STARFusion TCGA RNA-Seq PLCXD1-IGH@ PLCXD1 chrX 209756 + IGH@ chr14 106175004 - Exonic hg19 Non-Cancer TCGA-BR-7716-11A 197 0 Out-of-frame Inter-chr p22.33 32.33 128994 ChimerSeq STARFusion TCGA RNA-Seq PLCXD1-IGHA1 PLCXD1 chrY 159756 + IGHA1 chr14 106175004 - Exonic hg19 Non-Cancer TCGA-BR-7716-11A 197 0 Out-of-frame Inter-chr p22.33 128995 ChimerSeq STARFusion TCGA RNA-Seq DHRSX-IGH@ DHRSX chrY 2134826 - IGH@ chr14 106175000 - Exonic hg19 Non-Cancer TCGA-BR-7716-11A 125 0 Out-of-frame Inter-chr p22.33 32.33 128996 ChimerSeq STARFusion TCGA RNA-Seq DHRSX-IGHA1 DHRSX chrX 2184826 - IGHA1 chr14 106175000 - Exonic hg19 Non-Cancer TCGA-BR-7716-11A 125 0 Out-of-frame Inter-chr p22.33 128997 ChimerSeq STARFusion TCGA RNA-Seq PLCXD1-IGH@ PLCXD1 chrY 159756 + IGH@ chr14 106175004 - Exonic hg19 Non-Cancer TCGA-BR-7716-11A 94 0 Out-of-frame Inter-chr p22.33 32.33 128998 ChimerSeq STARFusion TCGA RNA-Seq PLCXD1-IGHA1 PLCXD1 chrX 209756 + IGHA1 chr14 106175004 - Exonic hg19 Non-Cancer TCGA-BR-7716-11A 94 0 Out-of-frame Inter-chr p22.33 128999 ChimerSeq STARFusion TCGA RNA-Seq KRT8P4-DES KRT8P4 chr8 90425097 - DES chr2 220288498 + Exonic hg19 Non-Cancer TCGA-BR-7716-11A 56 0 Out-of-frame Inter-chr q21.3 q35 129000 ChimerSeq STARFusion TCGA RNA-Seq GKN1-IGJ GKN1 chr2 69208016 + IGJ chr4 71532238 - Exonic hg19 Non-Cancer TCGA-BR-7716-11A 23 6 Out-of-frame Inter-chr p13.3 Tumor suppressor gene 129001 ChimerSeq STARFusion TCGA RNA-Seq NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer TCGA-BR-7716-11A 20 0 Out-of-frame Intra-chr p11.2 129002 ChimerSeq STARFusion TCGA RNA-Seq MIPEPP3-ABHD12 MIPEPP3 chr13 21872464 + ABHD12 chr20 25371382 - Exonic hg19 Non-Cancer TCGA-BR-7716-11A 19 0 Out-of-frame Inter-chr q12.11 p11.21 129003 ChimerSeq STARFusion TCGA RNA-Seq GKN1-CD74 GKN1 chr2 69207939 + CD74 chr5 149792311 - Exonic hg19 Non-Cancer TCGA-BR-7716-11A 18 1 Out-of-frame Inter-chr p13.3 Tumor suppressor gene q33.1 129004 ChimerSeq STARFusion TCGA RNA-Seq GKN1-IGJ GKN1 chr2 69208024 + IGJ chr4 71532230 - Exonic hg19 Non-Cancer TCGA-BR-7716-11A 14 6 Out-of-frame Inter-chr p13.3 Tumor suppressor gene 129005 ChimerSeq STARFusion TCGA RNA-Seq IGJ-PSMD5 IGJ chr4 71521677 - PSMD5 chr9 123586599 - Exonic hg19 Non-Cancer TCGA-BR-7716-11A 14 0 Out-of-frame Inter-chr q33.2 129006 ChimerSeq STARFusion TCGA RNA-Seq RN7SL2-PIGR RN7SL2 chr14 50329518 - PIGR chr1 207102864 - Exonic hg19 Non-Cancer TCGA-BR-7716-11A 11 7 Out-of-frame Inter-chr q21.3 q32.1 129007 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BR-7716-11A 11 1 Out-of-frame Intra-chr q11.22 q11.23 129008 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BR-7716-11A 11 1 Out-of-frame Intra-chr q11.22 q11.22 129009 ChimerSeq STARFusion TCGA RNA-Seq GKN1-IGLC2 GKN1 chr2 69207934 + IGLC2 chr22 23243432 + Exonic hg19 Non-Cancer TCGA-BR-7716-11A 10 2 Out-of-frame Inter-chr p13.3 Tumor suppressor gene q11.22 129010 ChimerSeq STARFusion TCGA RNA-Seq IGJ-FGF23 IGJ chr4 71521266 - FGF23 chr12 4479175 - Exonic hg19 Non-Cancer TCGA-BR-7716-11A 9 0 Out-of-frame Inter-chr p13.32 129011 ChimerSeq STARFusion TCGA RNA-Seq RN7SL2-LYZ RN7SL2 chr14 50329518 - LYZ chr12 69747314 + Exonic hg19 Non-Cancer TCGA-BR-7716-11A 5 5 Out-of-frame Inter-chr q21.3 q15 129012 ChimerSeq STARFusion TCGA RNA-Seq RN7SL2-PIGR RN7SL2 chr14 50329319 - PIGR chr1 207102860 - Exonic hg19 Non-Cancer TCGA-BR-7716-11A 4 7 Out-of-frame Inter-chr q21.3 q32.1 129013 ChimerSeq STARFusion TCGA RNA-Seq HCFC1-IGH@ HCFC1 chrX 153222120 - IGH@ chr14 106054733 - Exonic hg19 Non-Cancer TCGA-BR-6453-11A 13 0 Out-of-frame Inter-chr q28 32.33 129014 ChimerSeq STARFusion TCGA RNA-Seq HCFC1-IGHA2 HCFC1 chrX 153222120 - IGHA2 chr14 106054733 - Exonic hg19 Non-Cancer TCGA-BR-6453-11A 13 0 Out-of-frame Inter-chr q28 129015 ChimerSeq STARFusion TCGA RNA-Seq AES-KRT4 AES chr19 3062753 - KRT4 chr12 53207605 - Exonic hg19 Non-Cancer TCGA-IN-8663-11A 8 1 Out-of-frame Inter-chr p13.3 q13.13 129016 ChimerSeq STARFusion TCGA RNA-Seq CSTA-SPRR1A CSTA chr3 122044163 + SPRR1A chr1 152956557 + Exonic hg19 Non-Cancer TCGA-IN-8663-11A 5 9 Out-of-frame Inter-chr q21.1 q21.3 129017 ChimerSeq STARFusion TCGA RNA-Seq DSP-SPRR3 DSP chr6 7568137 + SPRR3 chr1 152974229 + Exonic hg19 Non-Cancer TCGA-IN-8663-11A 3 14 Out-of-frame Inter-chr p24.3 Tumor suppressor gene q21.3 129018 ChimerSeq STARFusion TCGA RNA-Seq KRT8P4-DES KRT8P4 chr8 90425097 - DES chr2 220288498 + Exonic hg19 Non-Cancer TCGA-IN-8663-11A 6 0 Out-of-frame Inter-chr q21.3 q35 129019 ChimerSeq STARFusion TCGA RNA-Seq KRT4-CCDC64B KRT4 chr12 53207584 - CCDC64B chr16 3086907 - Exonic hg19 Non-Cancer TCGA-IN-8663-11A 5 1 Out-of-frame Inter-chr q13.13 129020 ChimerSeq STARFusion TCGA RNA-Seq SPRR2A-STAT6 SPRR2A chr1 153028604 - STAT6 chr12 57496796 - Exonic hg19 Non-Cancer TCGA-IN-8663-11A 5 0 Out-of-frame Inter-chr q21.3 q13.3 Transcription factor 129021 ChimerSeq STARFusion TCGA RNA-Seq ZC3HAV1-SPRR3 ZC3HAV1 chr7 138764283 - SPRR3 chr1 152975882 + Exonic hg19 Non-Cancer TCGA-IN-8663-11A 4 1 Out-of-frame Inter-chr q34 q21.3 129022 ChimerSeq STARFusion TCGA RNA-Seq KRT4-CD59 KRT4 chr12 53202507 - CD59 chr11 33757967 - Exonic hg19 Non-Cancer TCGA-IN-8663-11A 3 4 Out-of-frame Inter-chr q13.13 p13 129023 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-IN-8663-11A 2 3 Out-of-frame Intra-chr q11.22 q11.22 129024 ChimerSeq STARFusion TCGA RNA-Seq GAS6-IGH@ GAS6 chr13 114525072 - IGH@ chr14 106175004 - Exonic hg19 Non-Cancer TCGA-CG-5722-11A 17 0 Out-of-frame Inter-chr q34 Oncogene 32.33 129025 ChimerSeq STARFusion TCGA RNA-Seq IGJ-FGF23 IGJ chr4 71521266 - FGF23 chr12 4479175 - Exonic hg19 Non-Cancer TCGA-CG-5722-11A 8 0 Out-of-frame Inter-chr p13.32 129026 ChimerSeq STARFusion TCGA RNA-Seq IGH@-PALM3 IGH@ chr14 107170319 - PALM3 chr19 14167323 - Exonic hg19 Non-Cancer TCGA-CG-5722-11A 7 0 Out-of-frame Inter-chr 32.33 p13.12 129027 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-CG-5722-11A 4 0 5'UTR-CDS Intra-chr q13.1 q13.1 129028 ChimerSeq STARFusion TCGA RNA-Seq GCDH-ZNF536 GCDH chr19 13010494 + ZNF536 chr19 31039222 + Exonic hg19 Non-Cancer TCGA-CG-5722-11A 3 0 Out-of-frame Intra-chr p13.13 q12 Transcription factor 129029 ChimerSeq STARFusion TCGA RNA-Seq GKN1-IGJ GKN1 chr2 69208024 + IGJ chr4 71532230 - Exonic hg19 Non-Cancer TCGA-CG-5722-11A 3 0 Out-of-frame Inter-chr p13.3 Tumor suppressor gene 129030 ChimerSeq STARFusion TCGA RNA-Seq LEKR1-IGLJ2 LEKR1 chr3 156729312 + IGLJ2 chr22 23241805 + Exonic hg19 Non-Cancer TCGA-CG-5722-11A 3 0 Out-of-frame Inter-chr q25.31 q11.22 129031 ChimerSeq STARFusion TCGA RNA-Seq PPP2R2D-JAKMIP3 PPP2R2D chr10 133761295 + JAKMIP3 chr10 133918176 + Exonic hg19 Non-Cancer TCGA-CG-5722-11A 3 0 5'UTR-5'UTR Intra-chr q26.3 q26.3 129032 ChimerSeq STARFusion TCGA RNA-Seq SNX22-IGKJ2 SNX22 chr15 64449494 + IGKJ2 chr2 89161069 - Exonic hg19 Non-Cancer TCGA-CG-5722-11A 3 0 Out-of-frame Inter-chr q22.31 p11.2 129033 ChimerSeq STARFusion TCGA RNA-Seq ARPC2-INO80D ARPC2 chr2 219082267 + INO80D chr2 206911336 - Exonic hg19 Non-Cancer TCGA-CG-5722-11A 2 0 Out-of-frame Intra-chr q35 129034 ChimerSeq STARFusion TCGA RNA-Seq CACNA2D3-INTS4 CACNA2D3 chr3 54157621 + INTS4 chr11 77692622 - Exonic hg19 Non-Cancer TCGA-CG-5722-11A 2 0 In-Frame Inter-chr p21.1 Tumor suppressor gene q14.1 129035 ChimerSeq STARFusion TCGA RNA-Seq LDLRAD3-PRR5L LDLRAD3 chr11 36120011 + PRR5L chr11 36422547 + Exonic hg19 Non-Cancer TCGA-CG-5722-11A 2 0 CDS-5'UTR Intra-chr p13 p13 129036 ChimerSeq STARFusion TCGA RNA-Seq KRT8P4-DES KRT8P4 chr8 90425097 - DES chr2 220288498 + Exonic hg19 Non-Cancer TCGA-IN-AB1V-11A 84 0 Out-of-frame Inter-chr q21.3 q35 129037 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44648235 - Exonic hg19 Non-Cancer TCGA-IN-AB1V-11A 54 9 CDS-5'UTR Intra-chr q21.31 129038 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-IN-AB1V-11A 16 3 Out-of-frame Intra-chr q11.22 q11.23 129039 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-IN-AB1V-11A 16 3 Out-of-frame Intra-chr q11.22 q11.22 129040 ChimerSeq STARFusion TCGA RNA-Seq DHRSX-IGH@ DHRSX chrX 2184830 - IGH@ chr14 106175004 - Exonic hg19 Non-Cancer TCGA-BR-6454-11A 738 0 Out-of-frame Inter-chr p22.33 32.33 129041 ChimerSeq STARFusion TCGA RNA-Seq DHRSX-IGHA1 DHRSX chrY 2134830 - IGHA1 chr14 106175004 - Exonic hg19 Non-Cancer TCGA-BR-6454-11A 738 0 Out-of-frame Inter-chr p22.33 129042 ChimerSeq STARFusion TCGA RNA-Seq DHRSX-IGH@ DHRSX chrY 2134830 - IGH@ chr14 106175004 - Exonic hg19 Non-Cancer TCGA-BR-6454-11A 302 0 Out-of-frame Inter-chr p22.33 32.33 129043 ChimerSeq STARFusion TCGA RNA-Seq DHRSX-IGHA1 DHRSX chrX 2184830 - IGHA1 chr14 106175004 - Exonic hg19 Non-Cancer TCGA-BR-6454-11A 302 0 Out-of-frame Inter-chr p22.33 129044 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-BR-6454-11A 44 0 Out-of-frame Inter-chr q21 q13.42 129045 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BR-6454-11A 11 0 Out-of-frame Intra-chr q11.22 q11.23 129046 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BR-6454-11A 11 0 Out-of-frame Intra-chr q11.22 q11.22 129047 ChimerSeq STARFusion TCGA RNA-Seq GABPA-MTND2P28 GABPA chr21 27107211 + MTND2P28 chr1 565887 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 6 1 Out-of-frame Inter-chr q21.3 Transcription factor p36.33 129048 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854180 - CBX3 chr7 26241365 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 5 1 Out-of-frame Inter-chr q15.1 p15.2 129049 ChimerSeq STARFusion TCGA RNA-Seq JSRP1-TPM2 JSRP1 chr19 2269567 - TPM2 chr9 35689919 - Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 3 2 Out-of-frame Inter-chr p13.3 p13.3 129050 ChimerSeq STARFusion TCGA RNA-Seq MYLK-MYH11 MYLK chr3 123333009 - MYH11 chr16 15797744 - Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 3 1 Out-of-frame Inter-chr q21.1 Oncogene 129051 ChimerSeq STARFusion TCGA RNA-Seq FER-PJA2 FER chr5 108084698 + PJA2 chr5 108691727 - Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 3 0 5'UTR-CDS Intra-chr q21.3 TK:Fer q21.3 129052 ChimerSeq STARFusion TCGA RNA-Seq FLNA-DAPK3 FLNA chrX 153581710 - DAPK3 chr19 3958968 - Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 3 0 Out-of-frame Inter-chr q28 Tumor suppressor gene p13.3 CAMK:DAPK Tumor suppressor gene 129053 ChimerSeq STARFusion TCGA RNA-Seq MLTK-EIF2S3 MLTK chr2 174090042 + EIF2S3 chrX 24095464 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 3 0 Out-of-frame Inter-chr p22.11 129054 ChimerSeq STARFusion TCGA RNA-Seq RN7SL580P-PMM1 RN7SL580P chr6 51840484 + PMM1 chr22 41985817 - Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 3 0 Out-of-frame Inter-chr p12.2 q13.2 129055 ChimerSeq STARFusion TCGA RNA-Seq YWHAH-MAFB YWHAH chr22 32352606 + MAFB chr20 39316400 - Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 3 0 Out-of-frame Inter-chr q12.3 q12 Oncogene Transcription factor 129056 ChimerSeq STARFusion TCGA RNA-Seq AKAP2-HSDL2 AKAP2 chr9 112811135 + HSDL2 chr9 115216293 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 Out-of-frame Intra-chr q31.3 q32 129057 ChimerSeq STARFusion TCGA RNA-Seq AP4B1-PARP14 AP4B1 chr1 114447227 - PARP14 chr3 122446659 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 Out-of-frame Inter-chr p13.2 q21.1 129058 ChimerSeq STARFusion TCGA RNA-Seq APC-HIPK3 APC chr5 112043346 + HIPK3 chr11 33307959 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 Out-of-frame Inter-chr q22.2 Oncogene Tumor suppressor gene p13 CMGC:DYRK 129059 ChimerSeq STARFusion TCGA RNA-Seq ASB7-CHD2 ASB7 chr15 101143518 + CHD2 chr15 93435234 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 5'UTR-5'UTR Intra-chr q26.3 q26.1 129060 ChimerSeq STARFusion TCGA RNA-Seq B4GALT5-GNAS B4GALT5 chr20 48330113 - GNAS chr20 57470667 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 Out-of-frame Intra-chr q13.13 q13.32 Oncogene 129061 ChimerSeq STARFusion TCGA RNA-Seq C10orf76-PARD3 C10orf76 chr10 103649169 - PARD3 chr10 34673182 - Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 Out-of-frame Intra-chr q24.32 p11.21 129062 ChimerSeq STARFusion TCGA RNA-Seq CASZ1-GNAS CASZ1 chr1 10753931 - GNAS chr20 57470667 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 Out-of-frame Inter-chr p36.22 Transcription factor q13.32 Oncogene 129063 ChimerSeq STARFusion TCGA RNA-Seq EZR-PSMB1 EZR chr6 159239114 - PSMB1 chr6 170858201 - Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 Out-of-frame Intra-chr q25.3 129064 ChimerSeq STARFusion TCGA RNA-Seq FZD6-LAPTM4B FZD6 chr8 104312512 + LAPTM4B chr8 98863625 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 In-Frame Intra-chr q22.3 q22.1 129065 ChimerSeq STARFusion TCGA RNA-Seq GAK-PLEKHG2 GAK chr4 891821 - PLEKHG2 chr19 39912755 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 Out-of-frame Inter-chr p16.3 Other:NAK q13.2 129066 ChimerSeq STARFusion TCGA RNA-Seq GLS-DIS3L2 GLS chr2 191746196 + DIS3L2 chr2 233028169 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 In-Frame Intra-chr q32.2 Tumor suppressor gene q37.1 129067 ChimerSeq STARFusion TCGA RNA-Seq HEPH-UNC50 HEPH chrX 65428088 + UNC50 chr2 99232670 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 Out-of-frame Inter-chr q12 q11.2 129068 ChimerSeq STARFusion TCGA RNA-Seq KIAA1217-RPA2 KIAA1217 chr10 24508838 + RPA2 chr1 28220617 - Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 In-Frame Inter-chr p12.2 p35.3 129069 ChimerSeq STARFusion TCGA RNA-Seq MAPKAP1-TBC1D1 MAPKAP1 chr9 128469250 - TBC1D1 chr4 38091553 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 Out-of-frame Inter-chr q33.3 p14 129070 ChimerSeq STARFusion TCGA RNA-Seq NDEL1-MYH10 NDEL1 chr17 8363478 + MYH10 chr17 8480656 - Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 In-Frame Intra-chr p13.1 p13.1 129071 ChimerSeq STARFusion TCGA RNA-Seq PBX1-EGLN1 PBX1 chr1 164532548 + EGLN1 chr1 231509845 - Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 Out-of-frame Intra-chr q23.3 Oncogene Transcription factor q42.2 Tumor suppressor gene 129072 ChimerSeq STARFusion TCGA RNA-Seq PHF8-MSN PHF8 chrX 54069064 - MSN chrX 64936680 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 Out-of-frame Intra-chr p11.22 q12 129073 ChimerSeq STARFusion TCGA RNA-Seq PSMD6-ANP32E PSMD6 chr3 64007994 - ANP32E chr1 150199127 - Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 Out-of-frame Inter-chr p14.1 q21.2 129074 ChimerSeq STARFusion TCGA RNA-Seq PTPN2-SLC44A1 PTPN2 chr18 12859163 - SLC44A1 chr9 108200562 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 Out-of-frame Inter-chr p11.21 Tumor suppressor gene q31.1 129075 ChimerSeq STARFusion TCGA RNA-Seq RBFOX2-ACTG1 RBFOX2 chr22 36142520 - ACTG1 chr17 79478652 - Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 Out-of-frame Inter-chr q25.3 129076 ChimerSeq STARFusion TCGA RNA-Seq SCHIP1-HOMER1 SCHIP1 chr3 159609979 + HOMER1 chr5 78752841 - Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 In-Frame Inter-chr q25.33 q14.1 129077 ChimerSeq STARFusion TCGA RNA-Seq SEC63-ZFAND3 SEC63 chr6 108279090 - ZFAND3 chr6 38029369 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 Out-of-frame Intra-chr q21 p21.2 129078 ChimerSeq STARFusion TCGA RNA-Seq SMARCA4-MOB3A SMARCA4 chr19 11152236 + MOB3A chr19 2078678 - Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 CDS-5'UTR Intra-chr p13.2 Oncogene Tumor suppressor gene p13.3 129079 ChimerSeq STARFusion TCGA RNA-Seq SPG11-CCDC14 SPG11 chr15 44925703 - CCDC14 chr3 123667979 - Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 In-Frame Inter-chr q21.1 q21.1 129080 ChimerSeq STARFusion TCGA RNA-Seq SPIN1-PPM1A SPIN1 chr9 91041506 + PPM1A chr14 60749402 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 In-Frame Inter-chr q22.1 q23.1 Tumor suppressor gene 129081 ChimerSeq STARFusion TCGA RNA-Seq SYNPO2-MYOZ2 SYNPO2 chr4 119944736 + MYOZ2 chr4 120072027 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 Out-of-frame Intra-chr q26 Tumor suppressor gene q26 129082 ChimerSeq STARFusion TCGA RNA-Seq TIAM2-SCAF8 TIAM2 chr6 155182132 + SCAF8 chr6 155095123 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 Out-of-frame Intra-chr q25.2 q25.2 129083 ChimerSeq STARFusion TCGA RNA-Seq TPM2-ACTG1 TPM2 chr9 35685061 - ACTG1 chr17 79478652 - Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 In-Frame Inter-chr p13.3 q25.3 129084 ChimerSeq STARFusion TCGA RNA-Seq TPM2-RGS14 TPM2 chr9 35685061 - RGS14 chr5 176793709 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 Out-of-frame Inter-chr p13.3 q35.3 129085 ChimerSeq STARFusion TCGA RNA-Seq TTBK2-MRRF TTBK2 chr15 43212636 - MRRF chr9 125075506 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 Out-of-frame Inter-chr q15.2 CK1:TTBK q33.2 129086 ChimerSeq STARFusion TCGA RNA-Seq TVP23C-CDRT4 TVP23C chr17 15449099 - CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 Out-of-frame Intra-chr p12 p12 129087 ChimerSeq STARFusion TCGA RNA-Seq VEZT-KLC1 VEZT chr12 95611662 + KLC1 chr14 104166992 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 In-Frame Inter-chr q22 Tumor suppressor gene q32.33 129088 ChimerSeq STARFusion TCGA RNA-Seq WDR17-SCYL2 WDR17 chr4 177046506 + SCYL2 chr12 100732306 + Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 Out-of-frame Inter-chr q34.2 q23.1 Other:SCY1 129089 ChimerSeq STARFusion TCGA RNA-Seq ZNF292-LAPTM4A ZNF292 chr6 87865477 + LAPTM4A chr2 20240772 - Exonic hg19 Non-Cancer TCGA-HU-A4GC-11A 2 0 In-Frame Inter-chr q14.3 Tumor suppressor gene Transcription factor p24.1 129090 ChimerSeq STARFusion TCGA RNA-Seq KRT8P4-DES KRT8P4 chr8 90425097 - DES chr2 220288498 + Exonic hg19 Non-Cancer TCGA-HU-A4HB-11A 150 0 Out-of-frame Inter-chr q21.3 q35 129091 ChimerSeq STARFusion TCGA RNA-Seq GATSL2-GTF2I GATSL2 chr7 74867229 - GTF2I chr7 74143124 + Exonic hg19 Non-Cancer TCGA-HU-A4HB-11A 5 66 Out-of-frame Intra-chr q11.23 Transcription factor 129092 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-HU-A4HB-11A 19 1 Out-of-frame Intra-chr q11.22 q11.23 129093 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-HU-A4HB-11A 19 1 Out-of-frame Intra-chr q11.22 q11.22 129094 ChimerSeq STARFusion TCGA RNA-Seq NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer TCGA-HU-A4HB-11A 16 0 Out-of-frame Intra-chr p11.2 129095 ChimerSeq STARFusion TCGA RNA-Seq MYH11-ACTG2 MYH11 chr16 15829248 - ACTG2 chr2 74120138 + Exonic hg19 Non-Cancer TCGA-HU-A4HB-11A 3 14 Out-of-frame Inter-chr Oncogene p13.1 129096 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-IN-7806-11A 58 0 Out-of-frame Inter-chr q21 q13.42 129097 ChimerSeq STARFusion TCGA RNA-Seq KRT8P4-DES KRT8P4 chr8 90425097 - DES chr2 220288498 + Exonic hg19 Non-Cancer TCGA-IN-7806-11A 33 0 Out-of-frame Inter-chr q21.3 q35 129098 ChimerSeq STARFusion TCGA RNA-Seq CSTA-SPRR1A CSTA chr3 122044163 + SPRR1A chr1 152956557 + Exonic hg19 Non-Cancer TCGA-IN-7806-11A 18 1 Out-of-frame Inter-chr q21.1 q21.3 129099 ChimerSeq STARFusion TCGA RNA-Seq CSTB-SPRR1A CSTB chr21 45194122 - SPRR1A chr1 152956557 + Exonic hg19 Non-Cancer TCGA-IN-7806-11A 13 8 Out-of-frame Inter-chr q22.3 q21.3 129100 ChimerSeq STARFusion TCGA RNA-Seq MIPEPP3-ABHD12 MIPEPP3 chr13 21872464 + ABHD12 chr20 25371382 - Exonic hg19 Non-Cancer TCGA-IN-7806-11A 13 0 Out-of-frame Inter-chr q12.11 p11.21 129101 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44648235 - Exonic hg19 Non-Cancer TCGA-IN-7806-11A 11 4 CDS-5'UTR Intra-chr q21.31 129102 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-IN-7806-11A 12 0 Out-of-frame Intra-chr q11.22 q11.23 129103 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-IN-7806-11A 12 0 Out-of-frame Intra-chr q11.22 q11.22 129104 ChimerSeq STARFusion TCGA RNA-Seq S100A9-KRT4 S100A9 chr1 153333389 + KRT4 chr12 53207554 - Exonic hg19 Non-Cancer TCGA-IN-7806-11A 4 17 Out-of-frame Inter-chr q21.3 q13.13 129105 ChimerSeq STARFusion TCGA RNA-Seq S100A9-KRT4 S100A9 chr1 153333164 + KRT4 chr12 53202559 - Exonic hg19 Non-Cancer TCGA-IN-7806-11A 3 17 Out-of-frame Inter-chr q21.3 q13.13 129106 ChimerSeq STARFusion TCGA RNA-Seq S100A9-KRT4 S100A9 chr1 153333433 + KRT4 chr12 53207800 - Exonic hg19 Non-Cancer TCGA-IN-7806-11A 3 17 Out-of-frame Inter-chr q21.3 q13.13 129107 ChimerSeq STARFusion TCGA RNA-Seq KRT13-CRNN KRT13 chr17 39659265 - CRNN chr1 152383172 - Exonic hg19 Non-Cancer TCGA-IN-7806-11A 5 5 Out-of-frame Inter-chr q21.2 q21.3 Tumor suppressor gene 129108 ChimerSeq STARFusion TCGA RNA-Seq MIR3615-SLC9A3R1 MIR3615 chr17 72744775 - SLC9A3R1 chr17 72745291 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 18 13 Out-of-frame Intra-chr q25.1 q25.1 Tumor suppressor gene 129109 ChimerSeq STARFusion TCGA RNA-Seq MIR3615-SLC9A3R1 MIR3615 chr17 72744768 - SLC9A3R1 chr17 72745298 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 15 13 Out-of-frame Intra-chr q25.1 q25.1 Tumor suppressor gene 129110 ChimerSeq STARFusion TCGA RNA-Seq C10orf112-PLXDC2 C10orf112 chr10 20079115 + PLXDC2 chr10 20290704 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 9 0 Out-of-frame Intra-chr p12.31 129111 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 9 0 Out-of-frame Inter-chr q21 q13.42 129112 ChimerSeq STARFusion TCGA RNA-Seq MIPEPP3-ABHD12 MIPEPP3 chr13 21872464 + ABHD12 chr20 25371382 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 5 0 Out-of-frame Inter-chr q12.11 p11.21 129113 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 4 1 5'UTR-CDS Intra-chr q13.1 q13.1 129114 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 4 1 3'UTR-3'UTR Intra-chr 129115 ChimerSeq STARFusion TCGA RNA-Seq PIGR-SLTM PIGR chr1 207119711 - SLTM chr15 59179596 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 3 2 Out-of-frame Inter-chr q32.1 q22.1 129116 ChimerSeq STARFusion TCGA RNA-Seq UBE2I-IGH@ UBE2I chr16 1365828 + IGH@ chr14 106178993 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 3 1 Out-of-frame Inter-chr p13.3 32.33 129117 ChimerSeq STARFusion TCGA RNA-Seq CORO2A-REG3A CORO2A chr9 100897160 - REG3A chr2 79386511 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 3 0 Out-of-frame Inter-chr q22.33 p12 129118 ChimerSeq STARFusion TCGA RNA-Seq EPAS1-B2M EPAS1 chr2 46609228 + B2M chr15 45010241 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 3 0 CDS-3'UTR Inter-chr p21 Tumor suppressor gene Transcription factor Oncogene 129119 ChimerSeq STARFusion TCGA RNA-Seq FABP1-PCBP2 FABP1 chr2 88425730 - PCBP2 chr12 53835528 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 3 0 Out-of-frame Inter-chr p11.2 q13.13 129120 ChimerSeq STARFusion TCGA RNA-Seq FABP1-PRR13 FABP1 chr2 88425730 - PRR13 chr12 53835528 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 3 0 Out-of-frame Inter-chr p11.2 q13.13 129121 ChimerSeq STARFusion TCGA RNA-Seq FIZ1-ZNF524 FIZ1 chr19 56111655 - ZNF524 chr19 56113727 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 3 0 Out-of-frame Intra-chr q13.42 Transcription factor q13.42 Transcription factor 129122 ChimerSeq STARFusion TCGA RNA-Seq GSDMD-IGH@ GSDMD chr8 144643219 + IGH@ chr14 106175005 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 3 0 Out-of-frame Inter-chr 32.33 129123 ChimerSeq STARFusion TCGA RNA-Seq KIF13B-CTNNB1 KIF13B chr8 29102863 - CTNNB1 chr3 41265512 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 3 0 Out-of-frame Inter-chr p12 p22.1 Oncogene 129124 ChimerSeq STARFusion TCGA RNA-Seq FBRSL1-NOC4L FBRSL1 chr12 133102409 + NOC4L chr12 132635803 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 2 Out-of-frame Intra-chr q24.33 q24.33 129125 ChimerSeq STARFusion TCGA RNA-Seq B9D2-RAB4B B9D2 chr19 41869337 - RAB4B chr19 41292570 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Intra-chr q13.2 q13.2 129126 ChimerSeq STARFusion TCGA RNA-Seq C17orf78-NFAT5 C17orf78 chr17 35733092 + NFAT5 chr16 69660306 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 In-Frame Inter-chr q22.1 Transcription factor 129127 ChimerSeq STARFusion TCGA RNA-Seq C1RL-CHMP7 C1RL chr12 7260847 - CHMP7 chr8 23112760 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Inter-chr p13.31 p21.3 129128 ChimerSeq STARFusion TCGA RNA-Seq CALM2-BRD2 CALM2 chr2 47403580 - BRD2 chr6 32942239 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Inter-chr p21 Atypical:BRD 129129 ChimerSeq STARFusion TCGA RNA-Seq CCDC130-EXOC7 CCDC130 chr19 13843099 + EXOC7 chr17 74090662 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 5'UTR-CDS Inter-chr p13.13 q25.1 129130 ChimerSeq STARFusion TCGA RNA-Seq CCDC57-C14orf79 CCDC57 chr17 80156190 - C14orf79 chr14 105457828 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Inter-chr q25.3 q32.33 129131 ChimerSeq STARFusion TCGA RNA-Seq CHCHD3-APBB2 CHCHD3 chr7 132766617 - APBB2 chr4 40832594 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Inter-chr q33 Transcription factor p13 129132 ChimerSeq STARFusion TCGA RNA-Seq CLTC-RABEP1 CLTC chr17 57721844 + RABEP1 chr17 5211989 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 In-Frame Intra-chr q23.1 p13.2 129133 ChimerSeq STARFusion TCGA RNA-Seq CSAD-ACE CSAD chr12 53574351 - ACE chr17 61566009 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Inter-chr q13.13 q23.3 129134 ChimerSeq STARFusion TCGA RNA-Seq CSAD-ACE CSAD chr12 53574351 - ACE chr17 61566009 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Inter-chr q13.13 q23.3 129135 ChimerSeq STARFusion TCGA RNA-Seq CTNND1-SH3D19 CTNND1 chr11 57529518 + SH3D19 chr4 152100549 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 5'UTR-5'UTR Inter-chr q12.1 Tumor suppressor gene q31.3 129136 ChimerSeq STARFusion TCGA RNA-Seq DPEP1-MTG1 DPEP1 chr16 89680127 + MTG1 chr10 135209217 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Inter-chr q24.3 q26.3 129137 ChimerSeq STARFusion TCGA RNA-Seq DPP4-MTX2 DPP4 chr2 162929909 - MTX2 chr2 177161588 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Intra-chr q24.2 Tumor suppressor gene q31.1 129138 ChimerSeq STARFusion TCGA RNA-Seq DUSP3-TMUB2 DUSP3 chr17 41852080 - TMUB2 chr17 42267869 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Intra-chr q21.31 q21.31 129139 ChimerSeq STARFusion TCGA RNA-Seq DYM-AFG3L2 DYM chr18 46690055 - AFG3L2 chr18 12371690 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 In-Frame Intra-chr q21.1 p11.21 129140 ChimerSeq STARFusion TCGA RNA-Seq ELF2-TGIF1 ELF2 chr4 140005287 - TGIF1 chr18 3456352 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Inter-chr q31.1 Transcription factor p11.31 Transcription factor 129141 ChimerSeq STARFusion TCGA RNA-Seq EXOC4-SRSF4 EXOC4 chr7 133502297 + SRSF4 chr1 29487029 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Inter-chr q33 p35.3 129142 ChimerSeq STARFusion TCGA RNA-Seq FAM135A-ICA1 FAM135A chr6 71125079 + ICA1 chr7 8196844 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 5'UTR-CDS Inter-chr q13 p21.3 129143 ChimerSeq STARFusion TCGA RNA-Seq FGD4-FAM60A FGD4 chr12 32552893 + FAM60A chr12 31440718 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 5'UTR-CDS Intra-chr p11.21 129144 ChimerSeq STARFusion TCGA RNA-Seq GMDS-DUSP22 GMDS chr6 1930337 - DUSP22 chr6 304628 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Intra-chr p25.3 p25.3 Tumor suppressor gene 129145 ChimerSeq STARFusion TCGA RNA-Seq HEG1-UMPS HEG1 chr3 124709631 - UMPS chr3 124456415 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Intra-chr q21.2 q21.2 129146 ChimerSeq STARFusion TCGA RNA-Seq ITSN2-STK36 ITSN2 chr2 24468998 - STK36 chr2 219545326 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Intra-chr p23.3 q35 Oncogene 129147 ChimerSeq STARFusion TCGA RNA-Seq JTB-LAD1 JTB chr1 153949452 - LAD1 chr1 201353963 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Intra-chr q21.3 q32.1 129148 ChimerSeq STARFusion TCGA RNA-Seq LENG8-PFN1 LENG8 chr19 54969700 + PFN1 chr17 4850115 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Inter-chr p13.2 Tumor suppressor gene 129149 ChimerSeq STARFusion TCGA RNA-Seq LIMCH1-DGKH LIMCH1 chr4 41526495 + DGKH chr13 42752271 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 In-Frame Inter-chr p13 q14.11 129150 ChimerSeq STARFusion TCGA RNA-Seq MGAT4A-TMEM87B MGAT4A chr2 99342702 - TMEM87B chr2 112838634 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Intra-chr q11.2 q13 129151 ChimerSeq STARFusion TCGA RNA-Seq MLLT4-FGFR1OP MLLT4 chr6 168227917 + FGFR1OP chr6 167435897 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 In-Frame Intra-chr q27 129152 ChimerSeq STARFusion TCGA RNA-Seq MMP28-ZNF511 MMP28 chr17 34122271 - ZNF511 chr10 135126292 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Inter-chr q12 q26.3 Transcription factor 129153 ChimerSeq STARFusion TCGA RNA-Seq MYD88-FCGRT MYD88 chr3 38180519 + FCGRT chr19 50029267 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 In-Frame Inter-chr p22.2 Oncogene q13.33 129154 ChimerSeq STARFusion TCGA RNA-Seq NDUFV3-PKNOX1 NDUFV3 chr21 44317157 + PKNOX1 chr21 44424436 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 CDS-5'UTR Intra-chr q22.3 q22.3 Tumor suppressor gene Transcription factor 129155 ChimerSeq STARFusion TCGA RNA-Seq NEK3-CNOT1 NEK3 chr13 52730210 - CNOT1 chr16 58594266 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Inter-chr q14.3 Other:NEK q21 129156 ChimerSeq STARFusion TCGA RNA-Seq NEU4-NOC4L NEU4 chr2 242750369 + NOC4L chr12 132635526 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 5'UTR-CDS Inter-chr q24.33 129157 ChimerSeq STARFusion TCGA RNA-Seq NUP35-AQR NUP35 chr2 183995273 + AQR chr15 35219339 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 In-Frame Inter-chr q32.1 q14 129158 ChimerSeq STARFusion TCGA RNA-Seq PAPSS2-MBNL1 PAPSS2 chr10 89419765 + MBNL1 chr3 152132730 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 In-Frame Inter-chr q23.2 q25.1 129159 ChimerSeq STARFusion TCGA RNA-Seq PELI2-IPMK PELI2 chr14 56585455 + IPMK chr10 59997575 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Inter-chr q22.3 q21.1 129160 ChimerSeq STARFusion TCGA RNA-Seq PRDM10-PICALM PRDM10 chr11 129872617 - PICALM chr11 85742653 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 5'UTR-5'UTR Intra-chr q24.3 Transcription factor q14.2 129161 ChimerSeq STARFusion TCGA RNA-Seq PRKD2-MUC13 PRKD2 chr19 47204056 - MUC13 chr3 124641150 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Inter-chr q13.32 q21.2 129162 ChimerSeq STARFusion TCGA RNA-Seq PSD3-OVOL2 PSD3 chr8 18430038 - OVOL2 chr20 17937681 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Inter-chr p22 p11.23 Transcription factor 129163 ChimerSeq STARFusion TCGA RNA-Seq PSD3-SNX5 PSD3 chr8 18430038 - SNX5 chr20 17937681 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 In-Frame Inter-chr p22 p11.23 129164 ChimerSeq STARFusion TCGA RNA-Seq PTPN18-ARID1A PTPN18 chr2 131117219 + ARID1A chr1 27056142 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 In-Frame Inter-chr q21.1 p36.11 Oncogene Tumor suppressor gene 129165 ChimerSeq STARFusion TCGA RNA-Seq PTPRT-EIF5B PTPRT chr20 41818286 - EIF5B chr2 99976699 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Inter-chr q13.11 Oncogene Tumor suppressor gene q11.2 129166 ChimerSeq STARFusion TCGA RNA-Seq PTRH2-DNAJC1 PTRH2 chr17 57784732 - DNAJC1 chr10 22055238 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 5'UTR-CDS Inter-chr q23.1 p12.31 129167 ChimerSeq STARFusion TCGA RNA-Seq RNF125-MEP1B RNF125 chr18 29598990 + MEP1B chr18 29787215 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Intra-chr q12.1 q12.1 129168 ChimerSeq STARFusion TCGA RNA-Seq SF1-FUS SF1 chr11 64543970 - FUS chr16 31199646 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Inter-chr q13.1 p11.2 Tumor suppressor gene 129169 ChimerSeq STARFusion TCGA RNA-Seq SLC28A1-PDE8A SLC28A1 chr15 85488098 + PDE8A chr15 85607601 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Intra-chr q25.3 q25.3 129170 ChimerSeq STARFusion TCGA RNA-Seq SLC39A14-TRMT11 SLC39A14 chr8 22266009 + TRMT11 chr6 126332399 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 In-Frame Inter-chr p21.3 q22.32 129171 ChimerSeq STARFusion TCGA RNA-Seq TFDP2-SLC20A2 TFDP2 chr3 141811903 - SLC20A2 chr8 42330172 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 5'UTR-5'UTR Inter-chr q23 Transcription factor p11.21 129172 ChimerSeq STARFusion TCGA RNA-Seq TMED10-GPN2 TMED10 chr14 75643058 - GPN2 chr1 27215616 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 In-Frame Inter-chr q24.3 p36.11 129173 ChimerSeq STARFusion TCGA RNA-Seq TMEM117-YAF2 TMEM117 chr12 44338145 + YAF2 chr12 42555567 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 In-Frame Intra-chr q12 q12 129174 ChimerSeq STARFusion TCGA RNA-Seq TTC14-CGN TTC14 chr3 180321111 + CGN chr1 151501826 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 In-Frame Inter-chr q26.33 q21.3 129175 ChimerSeq STARFusion TCGA RNA-Seq TULP4-SYNJ2 TULP4 chr6 158850929 + SYNJ2 chr6 158438236 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 Out-of-frame Intra-chr q25.3 q25.3 129176 ChimerSeq STARFusion TCGA RNA-Seq USP6NL-FAM107B USP6NL chr10 11639630 - FAM107B chr10 14572514 - Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 In-Frame Intra-chr p14 p13 129177 ChimerSeq STARFusion TCGA RNA-Seq WWP1-CA13 WWP1 chr8 87414432 + CA13 chr8 86162969 + Exonic hg19 Non-Cancer TCGA-BR-7851-11A 2 0 In-Frame Intra-chr q21.3 q21.2 129178 ChimerSeq STARFusion TCGA RNA-Seq BMS1P20-IGLJ7 BMS1P20 chr22 22673581 + IGLJ7 chr22 23263570 + Exonic hg19 Non-Cancer TCGA-BR-6564-11A 94 27 Out-of-frame Intra-chr q11.22 129179 ChimerSeq STARFusion TCGA RNA-Seq GAS6-IGH@ GAS6 chr13 114525072 - IGH@ chr14 106175004 - Exonic hg19 Non-Cancer TCGA-BR-6564-11A 56 0 Out-of-frame Inter-chr q34 Oncogene 32.33 129180 ChimerSeq STARFusion TCGA RNA-Seq MIR3615-SLC9A3R1 MIR3615 chr17 72744768 - SLC9A3R1 chr17 72745298 + Exonic hg19 Non-Cancer TCGA-BR-6564-11A 5 0 Out-of-frame Intra-chr q25.1 q25.1 Tumor suppressor gene 129181 ChimerSeq STARFusion TCGA RNA-Seq MIPEPP3-ABHD12 MIPEPP3 chr13 21872464 + ABHD12 chr20 25371382 - Exonic hg19 Non-Cancer TCGA-BR-6564-11A 4 0 Out-of-frame Inter-chr q12.11 p11.21 129182 ChimerSeq STARFusion TCGA RNA-Seq MIR3615-SLC9A3R1 MIR3615 chr17 72744775 - SLC9A3R1 chr17 72745291 + Exonic hg19 Non-Cancer TCGA-BR-6564-11A 4 0 Out-of-frame Intra-chr q25.1 q25.1 Tumor suppressor gene 129183 ChimerSeq STARFusion TCGA RNA-Seq DDX17-KDELR3 DDX17 chr22 38879481 - KDELR3 chr22 38879442 + Exonic hg19 Non-Cancer TCGA-BR-6564-11A 3 0 Out-of-frame Intra-chr q13.1 q13.1 129184 ChimerSeq STARFusion TCGA RNA-Seq MAGI1-IGLJ3 MAGI1 chr3 65595576 - IGLJ3 chr22 23247168 + Exonic hg19 Non-Cancer TCGA-BR-6564-11A 3 0 Out-of-frame Inter-chr Oncogene q11.22 129185 ChimerSeq STARFusion TCGA RNA-Seq MALAT1-DUSP1 MALAT1 chr11 65267159 + DUSP1 chr5 172198198 - Exonic hg19 Non-Cancer TCGA-BR-6564-11A 3 0 Out-of-frame Inter-chr q13.1 q35.1 Tumor suppressor gene 129186 ChimerSeq STARFusion TCGA RNA-Seq MIR3615-SLC9A3R1 MIR3615 chr17 72744772 - SLC9A3R1 chr17 72745075 + Exonic hg19 Non-Cancer TCGA-BR-6564-11A 3 0 Out-of-frame Intra-chr q25.1 q25.1 Tumor suppressor gene 129187 ChimerSeq STARFusion TCGA RNA-Seq OR51S1-TP53I11 OR51S1 chr11 4869899 - TP53I11 chr11 44954601 - Exonic hg19 Non-Cancer TCGA-BR-6564-11A 3 0 Out-of-frame Intra-chr p15.4 p11.2 129188 ChimerSeq STARFusion TCGA RNA-Seq RN7SL3-PIGR RN7SL3 chr14 50320440 - PIGR chr1 207102864 - Exonic hg19 Non-Cancer TCGA-BR-6564-11A 3 0 Out-of-frame Inter-chr q21.3 q32.1 129189 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-BR-6564-11A 3 0 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 129190 ChimerSeq STARFusion TCGA RNA-Seq TVP23C-CDRT4 TVP23C chr17 15443747 - CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer TCGA-BR-6564-11A 3 0 Out-of-frame Intra-chr p12 p12 129191 ChimerSeq STARFusion TCGA RNA-Seq YIPF2-CARM1 YIPF2 chr19 11033482 - CARM1 chr19 11033441 + Exonic hg19 Non-Cancer TCGA-BR-6564-11A 3 0 Out-of-frame Intra-chr p13.2 p13.2 129192 ChimerSeq STARFusion TCGA RNA-Seq ATF7-UNK ATF7 chr12 54019735 - UNK chr17 73805841 + Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 Out-of-frame Inter-chr q13.13 Transcription factor q25.1 129193 ChimerSeq STARFusion TCGA RNA-Seq C17orf78-LSS C17orf78 chr17 35736320 + LSS chr21 47616181 - Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 Out-of-frame Inter-chr q22.3 129194 ChimerSeq STARFusion TCGA RNA-Seq C5orf56-NSD1 C5orf56 chr5 131785381 + NSD1 chr5 176662822 + Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 5'UTR-CDS Intra-chr q31.1 q35.3 Oncogene 129195 ChimerSeq STARFusion TCGA RNA-Seq CHRM2-MYH9 CHRM2 chr7 136554165 + MYH9 chr22 36718566 - Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 5'UTR-CDS Inter-chr q33 q12.3 Oncogene Tumor suppressor gene 129196 ChimerSeq STARFusion TCGA RNA-Seq COA1-BLVRA COA1 chr7 43769028 - BLVRA chr7 43810737 + Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 Out-of-frame Intra-chr p13 p13 129197 ChimerSeq STARFusion TCGA RNA-Seq COL4A1-HECTD4 COL4A1 chr13 110959291 - HECTD4 chr12 112657293 - Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 Out-of-frame Inter-chr q34 q24.13 129198 ChimerSeq STARFusion TCGA RNA-Seq DLC1-CLASP2 DLC1 chr8 13133771 - CLASP2 chr3 33592887 - Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 5'UTR-CDS Inter-chr p22 Tumor suppressor gene p22.3 129199 ChimerSeq STARFusion TCGA RNA-Seq ERBB2IP-THADA ERBB2IP chr5 65222634 + THADA chr2 43625278 - Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 5'UTR-CDS Inter-chr p21 129200 ChimerSeq STARFusion TCGA RNA-Seq FAIM3-STK17A FAIM3 chr1 207095163 - STK17A chr7 43647855 + Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 Out-of-frame Inter-chr p13 129201 ChimerSeq STARFusion TCGA RNA-Seq FARS2-CMAHP FARS2 chr6 5261893 + CMAHP chr6 25097429 - Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 5'UTR-3'UTR Intra-chr p25.1 p22.3 129202 ChimerSeq STARFusion TCGA RNA-Seq FDPS-ARHGAP35 FDPS chr1 155282186 + ARHGAP35 chr19 47491246 + Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 Out-of-frame Inter-chr q22 q13.32 Transcription factor 129203 ChimerSeq STARFusion TCGA RNA-Seq GLUD1P3-DCN GLUD1P3 chr10 75490631 + DCN chr12 91540029 - Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 Out-of-frame Inter-chr q22.2 q21.33 Tumor suppressor gene 129204 ChimerSeq STARFusion TCGA RNA-Seq GNA11-CCDC127 GNA11 chr19 3094785 + CCDC127 chr5 206073 - Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 In-Frame Inter-chr p13.3 Oncogene p15.33 129205 ChimerSeq STARFusion TCGA RNA-Seq GPC4-FHL1 GPC4 chrX 132548834 - FHL1 chrX 135288566 + Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 Out-of-frame Intra-chr q26.2 q26.3 Tumor suppressor gene 129206 ChimerSeq STARFusion TCGA RNA-Seq HCG18-EXOC4 HCG18 chr6 30294131 - EXOC4 chr7 133502078 + Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 Out-of-frame Inter-chr q33 129207 ChimerSeq STARFusion TCGA RNA-Seq ITGB4-ILVBL ITGB4 chr17 73720862 + ILVBL chr19 15230892 - Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 Out-of-frame Inter-chr q25.1 p13.12 129208 ChimerSeq STARFusion TCGA RNA-Seq MAP2K5-PIAS1 MAP2K5 chr15 67950952 + PIAS1 chr15 68434628 + Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 Out-of-frame Intra-chr q23 STE:STE7 q23 Tumor suppressor gene 129209 ChimerSeq STARFusion TCGA RNA-Seq MTMR3-RHOA MTMR3 chr22 30279348 + RHOA chr3 49413024 - Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 5'UTR-5'UTR Inter-chr q12.2 p21.31 Oncogene Tumor suppressor gene 129210 ChimerSeq STARFusion TCGA RNA-Seq OAZ1-XPOT OAZ1 chr19 2269743 + XPOT chr12 64803742 + Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 CDS-5'UTR Inter-chr p13.3 q14.2 129211 ChimerSeq STARFusion TCGA RNA-Seq PDSS2-ATG5 PDSS2 chr6 107780194 - ATG5 chr6 106649964 - Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 Out-of-frame Intra-chr q21 Tumor suppressor gene q21 129212 ChimerSeq STARFusion TCGA RNA-Seq PELI2-USP1 PELI2 chr14 56585455 + USP1 chr1 62905470 + Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 CDS-5'UTR Inter-chr q22.3 p31.3 129213 ChimerSeq STARFusion TCGA RNA-Seq PHACTR2-MAP7 PHACTR2 chr6 143858344 + MAP7 chr6 136742937 - Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 5'UTR-5'UTR Intra-chr q24.2 q23.3 129214 ChimerSeq STARFusion TCGA RNA-Seq PHLPP2-CDR2 PHLPP2 chr16 71757672 - CDR2 chr16 22376335 - Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 5'UTR-CDS Intra-chr q22.2 Tumor suppressor gene p12.2 129215 ChimerSeq STARFusion TCGA RNA-Seq PPARA-MYH14 PPARA chr22 46547873 + MYH14 chr19 50779248 + Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 5'UTR-CDS Inter-chr q13.31 Tumor suppressor gene Transcription factor q13.33 129216 ChimerSeq STARFusion TCGA RNA-Seq PSMD9-PIN1 PSMD9 chr12 122341013 + PIN1 chr19 9946016 + Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 CDS-5'UTR Inter-chr q24.31 p13.2 Tumor suppressor gene Transcription factor 129217 ChimerSeq STARFusion TCGA RNA-Seq PTRH2-CLTC PTRH2 chr17 57784732 - CLTC chr17 57721637 + Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 Out-of-frame Intra-chr q23.1 q23.1 129218 ChimerSeq STARFusion TCGA RNA-Seq RCC1-IMMT RCC1 chr1 28832596 + IMMT chr2 86389202 - Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 5'UTR-CDS Inter-chr p35.3 p11.2 129219 ChimerSeq STARFusion TCGA RNA-Seq RPS19-SLC6A19 RPS19 chr19 42373823 + SLC6A19 chr5 1221266 + Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 Out-of-frame Inter-chr q13.2 p15.33 129220 ChimerSeq STARFusion TCGA RNA-Seq SH3D19-CALM2 SH3D19 chr4 152147199 - CALM2 chr2 47397903 - Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 5'UTR-CDS Inter-chr q31.3 p21 129221 ChimerSeq STARFusion TCGA RNA-Seq SHOC2-ACSL5 SHOC2 chr10 112745523 + ACSL5 chr10 114154676 + Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 In-Frame Intra-chr q25.2 q25.2 129222 ChimerSeq STARFusion TCGA RNA-Seq SLC18B1-WHSC1 SLC18B1 chr6 133118121 - WHSC1 chr4 1902353 + Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 Out-of-frame Inter-chr q23.2 Oncogene 129223 ChimerSeq STARFusion TCGA RNA-Seq SNHG3-IMMT SNHG3 chr1 28832596 + IMMT chr2 86389202 - Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 5'UTR-CDS Inter-chr p35.3 p11.2 129224 ChimerSeq STARFusion TCGA RNA-Seq TRPM7-ANXA2 TRPM7 chr15 50978728 - ANXA2 chr15 60678285 - Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 Out-of-frame Intra-chr q21.2 q22.2 129225 ChimerSeq STARFusion TCGA RNA-Seq WDTC1-SLC9A1 WDTC1 chr1 27561442 + SLC9A1 chr1 27440777 - Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 5'UTR-CDS Intra-chr p36.11 p36.11 129226 ChimerSeq STARFusion TCGA RNA-Seq YTHDC2-CTNND1 YTHDC2 chr5 112851059 + CTNND1 chr11 57569205 + Exonic hg19 Non-Cancer TCGA-BR-6564-11A 2 0 In-Frame Inter-chr q22.2 q12.1 Tumor suppressor gene 129227 ChimerSeq STARFusion TCGA RNA-Seq MIPEPP3-ABHD12 MIPEPP3 chr13 21872464 + ABHD12 chr20 25371382 - Exonic hg19 Non-Cancer TCGA-CG-5730-11A 7 0 Out-of-frame Inter-chr q12.11 p11.21 129228 ChimerSeq STARFusion TCGA RNA-Seq IGJ-FGF23 IGJ chr4 71521266 - FGF23 chr12 4479175 - Exonic hg19 Non-Cancer TCGA-CG-5730-11A 6 0 Out-of-frame Inter-chr p13.32 129229 ChimerSeq STARFusion TCGA RNA-Seq APOA4-NFIC APOA4 chr11 116691433 - NFIC chr19 3465420 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 4 0 Out-of-frame Inter-chr q23.3 p13.3 Transcription factor 129230 ChimerSeq STARFusion TCGA RNA-Seq GAS6-IGH@ GAS6 chr13 114525072 - IGH@ chr14 106054734 - Exonic hg19 Non-Cancer TCGA-CG-5730-11A 4 0 Out-of-frame Inter-chr q34 Oncogene 32.33 129231 ChimerSeq STARFusion TCGA RNA-Seq RPL5-SLC20A1 RPL5 chr1 93297674 + SLC20A1 chr2 113417964 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 4 0 Out-of-frame Inter-chr p22.1 Tumor suppressor gene q14.1 129232 ChimerSeq STARFusion TCGA RNA-Seq APOB-CEA APOB chr2 21226075 - CEA chr19 42265162 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 3 0 Out-of-frame Inter-chr p24.1 129233 ChimerSeq STARFusion TCGA RNA-Seq APOB-CEACAM6 APOB chr2 21226075 - CEACAM6 chr19 42265162 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 3 0 Out-of-frame Inter-chr p24.1 q13.2 129234 ChimerSeq STARFusion TCGA RNA-Seq APPL2-NDUFA12 APPL2 chr12 105605008 - NDUFA12 chr12 95365396 - Exonic hg19 Non-Cancer TCGA-CG-5730-11A 3 0 In-Frame Intra-chr q23.3 q22 129235 ChimerSeq STARFusion TCGA RNA-Seq ATN1-SLC12A4 ATN1 chr12 7045951 + SLC12A4 chr16 67980457 - Exonic hg19 Non-Cancer TCGA-CG-5730-11A 3 0 Out-of-frame Inter-chr p13.31 q22.1 129236 ChimerSeq STARFusion TCGA RNA-Seq CIB2-OLA1 CIB2 chr15 78396992 - OLA1 chr2 174940167 - Exonic hg19 Non-Cancer TCGA-CG-5730-11A 3 0 Out-of-frame Inter-chr q25.1 q31.1 129237 ChimerSeq STARFusion TCGA RNA-Seq CTSH-SH3KBP1 CTSH chr15 79215404 - SH3KBP1 chrX 19702022 - Exonic hg19 Non-Cancer TCGA-CG-5730-11A 3 0 Out-of-frame Inter-chr q25.1 p22.12 129238 ChimerSeq STARFusion TCGA RNA-Seq GPATCH2L-PDIA4 GPATCH2L chr14 76674882 + PDIA4 chr7 148701254 - Exonic hg19 Non-Cancer TCGA-CG-5730-11A 3 0 Out-of-frame Inter-chr q24.3 q36.1 129239 ChimerSeq STARFusion TCGA RNA-Seq MAGI1-LPP MAGI1 chr3 66023671 - LPP chr3 188326949 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 3 0 Out-of-frame Intra-chr Oncogene q27.3 Oncogene 129240 ChimerSeq STARFusion TCGA RNA-Seq MUC2-IGH@ MUC2 chr11 1092661 + IGH@ chr14 106054520 - Exonic hg19 Non-Cancer TCGA-CG-5730-11A 3 0 Out-of-frame Inter-chr 32.33 129241 ChimerSeq STARFusion TCGA RNA-Seq MUC2-IGHA2 MUC2 chr11 1092661 + IGHA2 chr14 106054520 - Exonic hg19 Non-Cancer TCGA-CG-5730-11A 3 0 Out-of-frame Inter-chr 129242 ChimerSeq STARFusion TCGA RNA-Seq PTMS-PPP1R3B PTMS chr12 6875699 + PPP1R3B chr8 8995170 - Exonic hg19 Non-Cancer TCGA-CG-5730-11A 3 0 Out-of-frame Inter-chr p13.31 p23.1 129243 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 3 0 Out-of-frame Inter-chr q21 q13.42 129244 ChimerSeq STARFusion TCGA RNA-Seq SVIL-FTL SVIL chr10 29759328 - FTL chr19 49469071 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 3 0 Out-of-frame Inter-chr p11.23 q13.33 129245 ChimerSeq STARFusion TCGA RNA-Seq CDK15-GOLGA4 CDK15 chr2 202655383 + GOLGA4 chr3 37330726 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 0 Out-of-frame Inter-chr q33.1 p22.2 129246 ChimerSeq STARFusion TCGA RNA-Seq CNPY2-PRRC2C CNPY2 chr12 56708635 - PRRC2C chr1 171491316 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 0 Out-of-frame Inter-chr q13.3 q24.3 129247 ChimerSeq STARFusion TCGA RNA-Seq CTSB-TXNL1 CTSB chr8 11710119 - TXNL1 chr18 54293688 - Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 0 In-Frame Inter-chr p23.1 q21.31 129248 ChimerSeq STARFusion TCGA RNA-Seq DAPK1-NFIL3 DAPK1 chr9 90114054 + NFIL3 chr9 94173188 - Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 0 CDS-5'UTR Intra-chr q21.33 CAMK:DAPK Tumor suppressor gene q22.31 Transcription factor 129249 ChimerSeq STARFusion TCGA RNA-Seq ERBB3-C19orf54 ERBB3 chr12 56491724 + C19orf54 chr19 41246970 - Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 0 CDS-3'UTR Inter-chr q13.2 Oncogene q13.2 129250 ChimerSeq STARFusion TCGA RNA-Seq FLJ27365-CSNK1G2 FLJ27365 chr22 46449800 + CSNK1G2 chr19 1969507 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 0 Out-of-frame Inter-chr p13.3 129251 ChimerSeq STARFusion TCGA RNA-Seq GOSR2-CTNND1 GOSR2 chr17 45000587 + CTNND1 chr11 57569205 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 0 In-Frame Inter-chr q21.32 q12.1 Tumor suppressor gene 129252 ChimerSeq STARFusion TCGA RNA-Seq HDLBP-PAK2 HDLBP chr2 242254517 - PAK2 chr3 196509497 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 0 Out-of-frame Inter-chr q37.3 q29 STE:STE20 129253 ChimerSeq STARFusion TCGA RNA-Seq IGFBP3-ZDHHC8 IGFBP3 chr7 45956812 - ZDHHC8 chr22 20128140 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 0 Out-of-frame Inter-chr p12.3 Tumor suppressor gene q11.21 129254 ChimerSeq STARFusion TCGA RNA-Seq LDLR-ACY1 LDLR chr19 11222315 + ACY1 chr3 52019223 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 0 In-Frame Inter-chr p13.2 p21.2 Tumor suppressor gene 129255 ChimerSeq STARFusion TCGA RNA-Seq MAEA-CTBP1 MAEA chr4 1283770 + CTBP1 chr4 1235307 - Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 0 CDS-5'UTR Intra-chr p16.3 p16.3 129256 ChimerSeq STARFusion TCGA RNA-Seq NPAS2-AKAP10 NPAS2 chr2 101437661 + AKAP10 chr17 19827830 - Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 0 5'UTR-CDS Inter-chr q11.2 Tumor suppressor gene Transcription factor p11.2 129257 ChimerSeq STARFusion TCGA RNA-Seq OPTN-IL15RA OPTN chr10 13142302 + IL15RA chr10 6008302 - Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 0 5'UTR-5'UTR Intra-chr p13 p15.1 129258 ChimerSeq STARFusion TCGA RNA-Seq R3HCC1L-ST7 R3HCC1L chr10 99915904 + ST7 chr7 116849841 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 0 Out-of-frame Inter-chr q24.2 q31.2 Tumor suppressor gene 129259 ChimerSeq STARFusion TCGA RNA-Seq REG4-OGT REG4 chr1 120354032 - OGT chrX 70767757 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 0 Out-of-frame Inter-chr p12 q13.1 129260 ChimerSeq STARFusion TCGA RNA-Seq TM9SF4-TTC38 TM9SF4 chr20 30734658 + TTC38 chr22 46682970 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 0 In-Frame Inter-chr q11.21 q13.31 129261 ChimerSeq STARFusion TCGA RNA-Seq TTC19-TC2N TTC19 chr17 15909882 + TC2N chr14 92249554 - Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 0 Out-of-frame Inter-chr p12 129262 ChimerSeq STARFusion TCGA RNA-Seq UBAP1-UBE2R2 UBAP1 chr9 34179238 + UBE2R2 chr9 33886879 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 0 Out-of-frame Intra-chr p13.3 p13.3 129263 ChimerSeq STARFusion TCGA RNA-Seq ZNF148-USP9X ZNF148 chr3 125093946 - USP9X chrX 41082470 + Exonic hg19 Non-Cancer TCGA-CG-5730-11A 2 0 Out-of-frame Inter-chr q21.2 Transcription factor p11.4 Oncogene 129264 ChimerSeq STARFusion TCGA RNA-Seq MIR3615-SLC9A3R1 MIR3615 chr17 72744775 - SLC9A3R1 chr17 72745291 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 30 10 Out-of-frame Intra-chr q25.1 q25.1 Tumor suppressor gene 129265 ChimerSeq STARFusion TCGA RNA-Seq CSTA-SPRR1A CSTA chr3 122044163 + SPRR1A chr1 152956557 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 21 0 Out-of-frame Inter-chr q21.1 q21.3 129266 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 21 0 Out-of-frame Inter-chr q21 q13.42 129267 ChimerSeq STARFusion TCGA RNA-Seq MIR3615-SLC9A3R1 MIR3615 chr17 72744768 - SLC9A3R1 chr17 72745298 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 17 10 Out-of-frame Intra-chr q25.1 q25.1 Tumor suppressor gene 129268 ChimerSeq STARFusion TCGA RNA-Seq DNAJB1-TECRP1 DNAJB1 chr19 14640442 - TECRP1 chr4 87871187 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 12 4 Out-of-frame Inter-chr p13.12 Tumor suppressor gene q21.3 129269 ChimerSeq STARFusion TCGA RNA-Seq MIR3615-SLC9A3R1 MIR3615 chr17 72744778 - SLC9A3R1 chr17 72758150 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 10 10 5'UTR-CDS Intra-chr q25.1 q25.1 Tumor suppressor gene 129270 ChimerSeq STARFusion TCGA RNA-Seq MIR3615-SLC9A3R1 MIR3615 chr17 72744771 - SLC9A3R1 chr17 72758157 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 6 10 Out-of-frame Intra-chr q25.1 q25.1 Tumor suppressor gene 129271 ChimerSeq STARFusion TCGA RNA-Seq DNAJB1-TECRP1 DNAJB1 chr19 14640458 - TECRP1 chr4 87871127 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 7 4 Out-of-frame Inter-chr p13.12 Tumor suppressor gene q21.3 129272 ChimerSeq STARFusion TCGA RNA-Seq DNAJB1-TECRP1 DNAJB1 chr19 14640427 - TECRP1 chr4 87871148 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 6 4 Out-of-frame Inter-chr p13.12 Tumor suppressor gene q21.3 129273 ChimerSeq STARFusion TCGA RNA-Seq DNAJB1-TECRP1 DNAJB1 chr19 14640463 - TECRP1 chr4 87871181 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 6 4 Out-of-frame Inter-chr p13.12 Tumor suppressor gene q21.3 129274 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 6 2 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 129275 ChimerSeq STARFusion TCGA RNA-Seq FIZ1-ZNF524 FIZ1 chr19 56111655 - ZNF524 chr19 56113727 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 6 1 Out-of-frame Intra-chr q13.42 Transcription factor q13.42 Transcription factor 129276 ChimerSeq STARFusion TCGA RNA-Seq DNAJB1-TECRP1 DNAJB1 chr19 14640436 - TECRP1 chr4 87871181 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 5 4 Out-of-frame Inter-chr p13.12 Tumor suppressor gene q21.3 129277 ChimerSeq STARFusion TCGA RNA-Seq MIR3615-SLC9A3R1 MIR3615 chr17 72744770 - SLC9A3R1 chr17 72745062 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 3 10 Out-of-frame Intra-chr q25.1 q25.1 Tumor suppressor gene 129278 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 5 0 5'UTR-CDS Intra-chr q13.1 q13.1 129279 ChimerSeq STARFusion TCGA RNA-Seq CSTB-KRT13 CSTB chr21 45193941 - KRT13 chr17 39658788 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 3 5 Out-of-frame Inter-chr q22.3 q21.2 129280 ChimerSeq STARFusion TCGA RNA-Seq DNAJB1-TECRP1 DNAJB1 chr19 14640435 - TECRP1 chr4 87871156 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 3 4 Out-of-frame Inter-chr p13.12 Tumor suppressor gene q21.3 129281 ChimerSeq STARFusion TCGA RNA-Seq CSTB-KRT13 CSTB chr21 45196085 - KRT13 chr17 39659350 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 5 In-Frame Inter-chr q22.3 q21.2 129282 ChimerSeq STARFusion TCGA RNA-Seq KRT13-EMP1 KRT13 chr17 39661705 - EMP1 chr12 13367898 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 3 1 Out-of-frame Inter-chr q21.2 p13.1 Tumor suppressor gene 129283 ChimerSeq STARFusion TCGA RNA-Seq BAZ1A-DDX24 BAZ1A chr14 35343698 - DDX24 chr14 94528967 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 3 0 Out-of-frame Intra-chr q13.2 129284 ChimerSeq STARFusion TCGA RNA-Seq CA10-CAMSAP3 CA10 chr17 50235463 - CAMSAP3 chr19 7673119 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 3 0 Out-of-frame Inter-chr q22 p13.2 129285 ChimerSeq STARFusion TCGA RNA-Seq EMP1-SPRR1B EMP1 chr12 13349768 + SPRR1B chr1 153005063 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 3 0 Out-of-frame Inter-chr p13.1 Tumor suppressor gene q21.3 129286 ChimerSeq STARFusion TCGA RNA-Seq PARP10-GRINA PARP10 chr8 145064224 - GRINA chr8 145065396 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 3 0 Out-of-frame Intra-chr q24.3 q24.3 129287 ChimerSeq STARFusion TCGA RNA-Seq PITX1-DDX39B PITX1 chr5 134364288 - DDX39B chr6 31500735 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 3 0 Out-of-frame Inter-chr q31.1 Transcription factor 129288 ChimerSeq STARFusion TCGA RNA-Seq MIR205HG-C9orf3 MIR205HG chr1 209605170 + C9orf3 chr9 97848964 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 2 Out-of-frame Inter-chr q32.2 q22.32 129289 ChimerSeq STARFusion TCGA RNA-Seq EIF4E3-FOXP1 EIF4E3 chr3 71739161 - FOXP1 chr3 71630848 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 1 CDS-5'UTR Intra-chr p13 p13 Oncogene Tumor suppressor gene Transcription factor 129290 ChimerSeq STARFusion TCGA RNA-Seq IL1RN-RHCG IL1RN chr2 113875605 + RHCG chr15 90014953 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 1 CDS-3'UTR Inter-chr q14.1 q26.1 129291 ChimerSeq STARFusion TCGA RNA-Seq AGAP1-UGT1A1 AGAP1 chr2 236403493 + UGT1A1 chr2 234675680 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr q37.2 q37.1 Oncogene 129292 ChimerSeq STARFusion TCGA RNA-Seq AGAP1-UGT1A10 AGAP1 chr2 236403493 + UGT1A10 chr2 234675680 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr q37.2 q37.1 129293 ChimerSeq STARFusion TCGA RNA-Seq AGAP1-UGT1A3 AGAP1 chr2 236403493 + UGT1A3 chr2 234675680 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr q37.2 q37.1 129294 ChimerSeq STARFusion TCGA RNA-Seq AGAP1-UGT1A4 AGAP1 chr2 236403493 + UGT1A4 chr2 234675680 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr q37.2 q37.1 129295 ChimerSeq STARFusion TCGA RNA-Seq AGAP1-UGT1A5 AGAP1 chr2 236403493 + UGT1A5 chr2 234675680 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr q37.2 q37.1 129296 ChimerSeq STARFusion TCGA RNA-Seq AGAP1-UGT1A6 AGAP1 chr2 236403493 + UGT1A6 chr2 234675680 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr q37.2 q37.1 129297 ChimerSeq STARFusion TCGA RNA-Seq AGAP1-UGT1A7 AGAP1 chr2 236403493 + UGT1A7 chr2 234675680 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr q37.2 q37.1 129298 ChimerSeq STARFusion TCGA RNA-Seq AGAP1-UGT1A8 AGAP1 chr2 236403493 + UGT1A8 chr2 234675680 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr q37.2 q37.1 129299 ChimerSeq STARFusion TCGA RNA-Seq AGAP1-UGT1A9 AGAP1 chr2 236403493 + UGT1A9 chr2 234675680 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr q37.2 q37.1 129300 ChimerSeq STARFusion TCGA RNA-Seq AKT3-SDCCAG8 AKT3 chr1 243858893 - SDCCAG8 chr1 243468015 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr AGC:Akt Oncogene 129301 ChimerSeq STARFusion TCGA RNA-Seq ANKIB1-AKAP9 ANKIB1 chr7 91957214 + AKAP9 chr7 91722411 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 In-Frame Intra-chr q21.2 q21.2 Oncogene 129302 ChimerSeq STARFusion TCGA RNA-Seq BRE-CNOT2 BRE chr2 28268666 + CNOT2 chr12 70713078 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 In-Frame Inter-chr q15 129303 ChimerSeq STARFusion TCGA RNA-Seq BRWD1-CHMP1A BRWD1 chr21 40670358 - CHMP1A chr16 89713739 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 In-Frame Inter-chr q22.2 q24.3 129304 ChimerSeq STARFusion TCGA RNA-Seq C18orf25-SMAD4 C18orf25 chr18 43754296 + SMAD4 chr18 48581151 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 5'UTR-CDS Intra-chr q21.1 q21.2 Oncogene Tumor suppressor gene Transcription factor 129305 ChimerSeq STARFusion TCGA RNA-Seq CDH1-ALDH3A2 CDH1 chr16 68772314 + ALDH3A2 chr17 19578871 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Inter-chr q22.1 Oncogene Tumor suppressor gene p11.2 129306 ChimerSeq STARFusion TCGA RNA-Seq CGGBP1-CYP3A5 CGGBP1 chr3 88107169 - CYP3A5 chr7 99261718 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 5'UTR-CDS Inter-chr p11.1 Transcription factor q22.1 129307 ChimerSeq STARFusion TCGA RNA-Seq CLDN12-STRBP CLDN12 chr7 90034926 + STRBP chr9 125946577 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 5'UTR-5'UTR Inter-chr q21.13 q33.3 129308 ChimerSeq STARFusion TCGA RNA-Seq CLN6-FEM1B CLN6 chr15 68521840 - FEM1B chr15 68581945 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr q23 q23 129309 ChimerSeq STARFusion TCGA RNA-Seq CNOT10-ASAP1 CNOT10 chr3 32778982 + ASAP1 chr8 131200429 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Inter-chr p22.3 q24.22 129310 ChimerSeq STARFusion TCGA RNA-Seq CREB1-NFE2L2 CREB1 chr2 208394858 + NFE2L2 chr2 178098999 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 5'UTR-5'UTR Intra-chr q33.3 Oncogene Transcription factor q31.2 Oncogene Transcription factor 129311 ChimerSeq STARFusion TCGA RNA-Seq CROT-KIAA1109 CROT chr7 87022383 + KIAA1109 chr4 123283186 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 In-Frame Inter-chr q21.12 q27 129312 ChimerSeq STARFusion TCGA RNA-Seq CTCF-TBCD CTCF chr16 67605167 + TBCD chr17 80869634 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 5'UTR-CDS Inter-chr q22.1 Tumor suppressor gene Transcription factor 129313 ChimerSeq STARFusion TCGA RNA-Seq CTNND1-DGCR2 CTNND1 chr11 57529518 + DGCR2 chr22 19077003 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 5'UTR-CDS Inter-chr q12.1 Tumor suppressor gene q11.21 129314 ChimerSeq STARFusion TCGA RNA-Seq CTTNBP2NL-GPBP1 CTTNBP2NL chr1 112991794 + GPBP1 chr5 56509901 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 CDS-5'UTR Inter-chr p13.2 q11.2 Transcription factor 129315 ChimerSeq STARFusion TCGA RNA-Seq DAB2IP-TTLL11 DAB2IP chr9 124538670 + TTLL11 chr9 124752049 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr q33.2 Tumor suppressor gene q33.2 129316 ChimerSeq STARFusion TCGA RNA-Seq DENND2A-SUPT20H DENND2A chr7 140255436 - SUPT20H chr13 37598579 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Inter-chr q34 q13.3 129317 ChimerSeq STARFusion TCGA RNA-Seq DIO2-NEBL DIO2 chr14 80697244 - NEBL chr10 21101869 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 5'UTR-CDS Inter-chr q31.1 p12.31 129318 ChimerSeq STARFusion TCGA RNA-Seq EGFR-LANCL2 EGFR chr7 55087058 + LANCL2 chr7 55496068 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr p11.2 TK:EGFR Oncogene p11.2 129319 ChimerSeq STARFusion TCGA RNA-Seq EIF2S2-MTHFD1L EIF2S2 chr20 32699902 - MTHFD1L chr6 151330955 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Inter-chr q11.22 q25.1 129320 ChimerSeq STARFusion TCGA RNA-Seq EIF4E2-ACSL3 EIF4E2 chr2 233431924 + ACSL3 chr2 223806215 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr q37.1 q36.1 129321 ChimerSeq STARFusion TCGA RNA-Seq EPHX2-GPS1 EPHX2 chr8 27401761 + GPS1 chr17 80011150 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Inter-chr p21.2 q25.3 129322 ChimerSeq STARFusion TCGA RNA-Seq EVA1C-RBFOX2 EVA1C chr21 33840156 + RBFOX2 chr22 36140296 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Inter-chr q22.11 129323 ChimerSeq STARFusion TCGA RNA-Seq EZR-KLF5 EZR chr6 159239114 - KLF5 chr13 73635999 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Inter-chr q25.3 q22.1 Tumor suppressor gene Transcription factor 129324 ChimerSeq STARFusion TCGA RNA-Seq FAM115A-APLP2 FAM115A chr7 143599167 - APLP2 chr11 129979324 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Inter-chr q24.3 129325 ChimerSeq STARFusion TCGA RNA-Seq FAM214A-RNF111 FAM214A chr15 52970203 - RNF111 chr15 59323003 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr q21.3 q22.1 Tumor suppressor gene 129326 ChimerSeq STARFusion TCGA RNA-Seq FBXO46-OPA3 FBXO46 chr19 46234107 - OPA3 chr19 46057169 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 5'UTR-CDS Intra-chr q13.32 q13.32 129327 ChimerSeq STARFusion TCGA RNA-Seq FOPNL-TMX3 FOPNL chr16 15967348 - TMX3 chr18 66369027 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 In-Frame Inter-chr p13.11 q22.1 129328 ChimerSeq STARFusion TCGA RNA-Seq FOXP2-A2ML1 FOXP2 chr7 113726666 + A2ML1 chr12 9039103 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 5'UTR-3'UTR Inter-chr q31.1 Transcription factor p13.31 129329 ChimerSeq STARFusion TCGA RNA-Seq GFOD1-RREB1 GFOD1 chr6 13486870 - RREB1 chr6 7187667 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr p23 p24.3 Transcription factor 129330 ChimerSeq STARFusion TCGA RNA-Seq HMGN2-USP48 HMGN2 chr1 26799118 + USP48 chr1 22021714 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 In-Frame Intra-chr p36.11 p36.12 129331 ChimerSeq STARFusion TCGA RNA-Seq IBTK-GINM1 IBTK chr6 82900790 - GINM1 chr6 149899958 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr q25.1 129332 ChimerSeq STARFusion TCGA RNA-Seq IL20RB-STAG1 IL20RB chr3 136677043 + STAG1 chr3 136349823 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 CDS-5'UTR Intra-chr q22.3 q22.3 129333 ChimerSeq STARFusion TCGA RNA-Seq KDELR2-N4BP2L2 KDELR2 chr7 6509227 - N4BP2L2 chr13 33095586 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 In-Frame Inter-chr p22.1 q13.1 129334 ChimerSeq STARFusion TCGA RNA-Seq KHDRBS1-LRRC37A KHDRBS1 chr1 32479978 + LRRC37A chr17 44407816 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 CDS-5'UTR Inter-chr p35.2 129335 ChimerSeq STARFusion TCGA RNA-Seq LINC00894-IL13RA1 LINC00894 chrX 149116612 + IL13RA1 chrX 117925725 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr q28 q24 129336 ChimerSeq STARFusion TCGA RNA-Seq LPP-LANCL1 LPP chr3 187871809 + LANCL1 chr2 211306167 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 5'UTR-CDS Inter-chr q27.3 Oncogene q34 129337 ChimerSeq STARFusion TCGA RNA-Seq MAGED2-COX7B MAGED2 chrX 54835809 + COX7B chrX 77160681 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 In-Frame Intra-chr p11.21 q21.1 129338 ChimerSeq STARFusion TCGA RNA-Seq MBOAT2-NCOA1 MBOAT2 chr2 9143669 - NCOA1 chr2 24787164 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr p25.1 p23.3 Oncogene Transcription factor 129339 ChimerSeq STARFusion TCGA RNA-Seq MECOM-SKIL MECOM chr3 169381124 - SKIL chr3 170077487 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr q26.2 Transcription factor q26.2 Tumor suppressor gene Transcription factor 129340 ChimerSeq STARFusion TCGA RNA-Seq MED25-EEF2 MED25 chr19 50339202 + EEF2 chr19 3976745 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr q13.33 p13.3 129341 ChimerSeq STARFusion TCGA RNA-Seq MLF1IP-VPS13A MLF1IP chr4 185637551 - VPS13A chr9 79910458 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Inter-chr q21.2 129342 ChimerSeq STARFusion TCGA RNA-Seq MOSPD2-DYRK1A MOSPD2 chrX 14891880 + DYRK1A chr21 38792601 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 CDS-5'UTR Inter-chr p22.2 q22.13 CMGC:DYRK 129343 ChimerSeq STARFusion TCGA RNA-Seq NFIB-UBE2H NFIB chr9 14306988 - UBE2H chr7 129479175 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 In-Frame Inter-chr p22.3 Transcription factor q32.2 129344 ChimerSeq STARFusion TCGA RNA-Seq OLA1-SUN1 OLA1 chr2 175087761 - SUN1 chr7 908986 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Inter-chr q31.1 p22.3 129345 ChimerSeq STARFusion TCGA RNA-Seq PARP11-KIAA1551 PARP11 chr12 3982378 - KIAA1551 chr12 32133812 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr p13.32 p11.21 129346 ChimerSeq STARFusion TCGA RNA-Seq PDHX-CD44 PDHX chr11 34953031 + CD44 chr11 35236399 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 In-Frame Intra-chr p13 p13 Oncogene Tumor suppressor gene 129347 ChimerSeq STARFusion TCGA RNA-Seq PDLIM5-RAPH1 PDLIM5 chr4 95539342 + RAPH1 chr2 204356042 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Inter-chr q22.3 q33.2 129348 ChimerSeq STARFusion TCGA RNA-Seq PHEX-NDUFA3 PHEX chrX 22116153 + NDUFA3 chr19 54610118 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Inter-chr p22.11 129349 ChimerSeq STARFusion TCGA RNA-Seq PKP4-NFE2L2 PKP4 chr2 159313730 + NFE2L2 chr2 178098999 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 5'UTR-5'UTR Intra-chr q24.1 q31.2 Oncogene Transcription factor 129350 ChimerSeq STARFusion TCGA RNA-Seq PLAGL1-FBXO8 PLAGL1 chr6 144290044 - FBXO8 chr4 175162369 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 5'UTR-CDS Inter-chr q24.2 Tumor suppressor gene Transcription factor q34.1 129351 ChimerSeq STARFusion TCGA RNA-Seq PSMA1-SSU72 PSMA1 chr11 14535949 - SSU72 chr1 1480382 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Inter-chr p15.2 p36.33 129352 ChimerSeq STARFusion TCGA RNA-Seq PXDC1-RHEB PXDC1 chr6 3751510 - RHEB chr7 151188100 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 In-Frame Inter-chr p25.2 q36.1 Oncogene 129353 ChimerSeq STARFusion TCGA RNA-Seq RAF1-PPARG RAF1 chr3 12705312 - PPARG chr3 12353879 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr p25.2 TKL:RAF Oncogene p25.2 Oncogene Tumor suppressor gene Transcription factor 129354 ChimerSeq STARFusion TCGA RNA-Seq RAPGEF5-TAX1BP1 RAPGEF5 chr7 22306583 - TAX1BP1 chr7 27867357 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr p15.3 p15.2 129355 ChimerSeq STARFusion TCGA RNA-Seq RSU1-ARL5B RSU1 chr10 16858972 - ARL5B chr10 18955504 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr p13 p12.31 129356 ChimerSeq STARFusion TCGA RNA-Seq SEC11A-RPS17 SEC11A chr15 85259256 - RPS17 chr15 82824540 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 CDS-3'UTR Intra-chr q25.3 q25.2 129357 ChimerSeq STARFusion TCGA RNA-Seq SIPA1-DNM2 SIPA1 chr11 65405653 + DNM2 chr19 10922940 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 5'UTR-CDS Inter-chr q13.1 p13.2 129358 ChimerSeq STARFusion TCGA RNA-Seq TBC1D8-NCKAP5 TBC1D8 chr2 101767589 - NCKAP5 chr2 134316688 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 CDS-5'UTR Intra-chr q11.2 q21.2 129359 ChimerSeq STARFusion TCGA RNA-Seq TEF-ACSF3 TEF chr22 41763603 + ACSF3 chr16 89187209 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 In-Frame Inter-chr q13.2 Transcription factor q24.3 129360 ChimerSeq STARFusion TCGA RNA-Seq TFPI-TCP1 TFPI chr2 188418927 - TCP1 chr6 160208903 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 5'UTR-5'UTR Inter-chr q32.1 q25.3 129361 ChimerSeq STARFusion TCGA RNA-Seq TMEM165-KIF5B TMEM165 chr4 56262563 + KIF5B chr10 32311964 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 In-Frame Inter-chr q12 p11.22 129362 ChimerSeq STARFusion TCGA RNA-Seq TMOD3-TC2N TMOD3 chr15 52155207 + TC2N chr14 92249554 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 In-Frame Inter-chr q21.2 129363 ChimerSeq STARFusion TCGA RNA-Seq TPM2-SIRPA TPM2 chr9 35685061 - SIRPA chr20 1876085 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Inter-chr p13.3 p13 129364 ChimerSeq STARFusion TCGA RNA-Seq TPRG1-ZADH2 TPRG1 chr3 189028328 + ZADH2 chr18 72914295 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Inter-chr q28 q22.3 129365 ChimerSeq STARFusion TCGA RNA-Seq TRIM29-C9orf3 TRIM29 chr11 119998044 - C9orf3 chr9 97848964 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Inter-chr q23.3 q22.32 129366 ChimerSeq STARFusion TCGA RNA-Seq UBE2J1-PYGB UBE2J1 chr6 90052043 - PYGB chr20 25271117 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Inter-chr q15 p11.21 129367 ChimerSeq STARFusion TCGA RNA-Seq UBL3-MVP UBL3 chr13 30423649 - MVP chr16 29857479 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Inter-chr q12.3 p11.2 129368 ChimerSeq STARFusion TCGA RNA-Seq UCHL5-RABGAP1L UCHL5 chr1 192990227 - RABGAP1L chr1 174340117 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr q31.2 q25.1 129369 ChimerSeq STARFusion TCGA RNA-Seq UGT1A7-AGAP1 UGT1A7 chr2 234591438 + AGAP1 chr2 236791989 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 In-Frame Intra-chr q37.1 q37.2 129370 ChimerSeq STARFusion TCGA RNA-Seq USP48-CDC42 USP48 chr1 22109317 - CDC42 chr1 22404922 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr p36.12 p36.12 129371 ChimerSeq STARFusion TCGA RNA-Seq VPS29-GTF2H3 VPS29 chr12 110939854 - GTF2H3 chr12 124130002 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Intra-chr q24.11 q24.31 129372 ChimerSeq STARFusion TCGA RNA-Seq VPS53-UBR5 VPS53 chr17 526773 - UBR5 chr8 103277506 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 In-Frame Inter-chr Tumor suppressor gene q22.3 Oncogene 129373 ChimerSeq STARFusion TCGA RNA-Seq ZADH2-TNFRSF19 ZADH2 chr18 72920805 - TNFRSF19 chr13 24164289 + Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 Out-of-frame Inter-chr q22.3 q12.12 129374 ChimerSeq STARFusion TCGA RNA-Seq ZNF14-SATB1 ZNF14 chr19 19843765 - SATB1 chr3 18393687 - Exonic hg19 Non-Cancer TCGA-IN-8462-11A 2 0 In-Frame Inter-chr p13.11 Transcription factor p24.3 Transcription factor 129375 ChimerSeq STARFusion TCGA RNA-Seq KRT8P4-DES KRT8P4 chr8 90425097 - DES chr2 220288498 + Exonic hg19 Non-Cancer TCGA-FP-7829-11A 158 0 Out-of-frame Inter-chr q21.3 q35 129376 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-FP-7829-11A 21 5 Out-of-frame Intra-chr q11.22 q11.23 129377 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-FP-7829-11A 21 5 Out-of-frame Intra-chr q11.22 q11.22 129378 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44648235 - Exonic hg19 Non-Cancer TCGA-FP-7829-11A 17 2 CDS-5'UTR Intra-chr q21.31 129379 ChimerSeq STARFusion TCGA RNA-Seq TPM2-ACTG1 TPM2 chr9 35685061 - ACTG1 chr17 79478652 - Exonic hg19 Non-Cancer TCGA-FP-7829-11A 13 0 In-Frame Inter-chr p13.3 q25.3 129380 ChimerSeq STARFusion TCGA RNA-Seq TPM2-MYH11 TPM2 chr9 35682050 - MYH11 chr16 15850275 - Exonic hg19 Non-Cancer TCGA-FP-7829-11A 3 11 Out-of-frame Inter-chr p13.3 Oncogene 129381 ChimerSeq STARFusion TCGA RNA-Seq TPM2-MYH11 TPM2 chr9 35689215 - MYH11 chr16 15931938 - Exonic hg19 Non-Cancer TCGA-FP-7829-11A 3 11 Out-of-frame Inter-chr p13.3 Oncogene 129382 ChimerSeq STARFusion TCGA RNA-Seq C10orf68-CCDC7 C10orf68 chr10 32873232 + CCDC7 chr10 32832228 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 4 3 Out-of-frame Intra-chr p11.22 129383 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854971 - CBX3 chr7 26241389 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 4 0 Out-of-frame Inter-chr q15.1 p15.2 129384 ChimerSeq STARFusion TCGA RNA-Seq FIZ1-ZNF524 FIZ1 chr19 56111655 - ZNF524 chr19 56113727 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 3 1 Out-of-frame Intra-chr q13.42 Transcription factor q13.42 Transcription factor 129385 ChimerSeq STARFusion TCGA RNA-Seq ABHD12-KDM2A ABHD12 chr20 25371149 - KDM2A chr11 66887345 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 3 0 Out-of-frame Inter-chr p11.21 q13.2 Transcription factor 129386 ChimerSeq STARFusion TCGA RNA-Seq ACTB-PRRC2A ACTB chr7 5569173 - PRRC2A chr6 31600199 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 3 0 Out-of-frame Inter-chr p22.1 129387 ChimerSeq STARFusion TCGA RNA-Seq AP2B1-DBNDD2 AP2B1 chr17 34052920 + DBNDD2 chr20 44037108 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 3 0 Out-of-frame Inter-chr q12 q13.12 129388 ChimerSeq STARFusion TCGA RNA-Seq CALD1-ZC3H13 CALD1 chr7 134635229 + ZC3H13 chr13 46543713 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 3 0 Out-of-frame Inter-chr q33 q14.13 129389 ChimerSeq STARFusion TCGA RNA-Seq CAPN12-SOD3 CAPN12 chr19 39221039 - SOD3 chr4 24801447 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 3 0 Out-of-frame Inter-chr q13.2 p15.2 129390 ChimerSeq STARFusion TCGA RNA-Seq CRYAB-CRIM1 CRYAB chr11 111783475 - CRIM1 chr2 36706642 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 3 0 Out-of-frame Inter-chr q23.1 p22.2 129391 ChimerSeq STARFusion TCGA RNA-Seq NAV2-NDUFAF2 NAV2 chr11 19372574 + NDUFAF2 chr5 60368952 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 3 0 Out-of-frame Inter-chr p15.1 q12.1 129392 ChimerSeq STARFusion TCGA RNA-Seq NDE1-TPM2 NDE1 chr16 15818583 + TPM2 chr9 35689919 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 3 0 Out-of-frame Inter-chr p13.11 p13.3 129393 ChimerSeq STARFusion TCGA RNA-Seq RPL8-CPE RPL8 chr8 146015193 - CPE chr4 166408675 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 3 0 Out-of-frame Inter-chr q24.3 q32.3 129394 ChimerSeq STARFusion TCGA RNA-Seq SMC1A-NAV1 SMC1A chrX 53441707 - NAV1 chr1 201763672 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 3 0 Out-of-frame Inter-chr p11.22 q32.1 129395 ChimerSeq STARFusion TCGA RNA-Seq SMG1-CYB5R1 SMG1 chr16 18846274 - CYB5R1 chr1 202936400 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 3 0 Out-of-frame Inter-chr p12.3 Atypical:PIKK q32.1 129396 ChimerSeq STARFusion TCGA RNA-Seq SMPD4-DDT SMPD4 chr2 130939841 - DDT chr22 24316134 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 3 0 Out-of-frame Inter-chr q21.1 129397 ChimerSeq STARFusion TCGA RNA-Seq SOGA2-PLXNA3 SOGA2 chr18 8825737 + PLXNA3 chrX 153701147 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 3 0 Out-of-frame Inter-chr q28 129398 ChimerSeq STARFusion TCGA RNA-Seq SYNM-DNAJB2 SYNM chr15 99675246 + DNAJB2 chr2 220151295 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 3 0 Out-of-frame Inter-chr q26.3 Tumor suppressor gene q35 129399 ChimerSeq STARFusion TCGA RNA-Seq TPM2-ACTG1 TPM2 chr9 35685061 - ACTG1 chr17 79478652 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 3 0 In-Frame Inter-chr p13.3 q25.3 129400 ChimerSeq STARFusion TCGA RNA-Seq VWA1-FTH1 VWA1 chr1 1372800 + FTH1 chr11 61734880 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 3 0 Out-of-frame Inter-chr p36.33 q12.3 129401 ChimerSeq STARFusion TCGA RNA-Seq HNRNPH3-RAB18 HNRNPH3 chr10 70097090 + RAB18 chr10 27815757 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 1 In-Frame Intra-chr q21.3 p12.1 129402 ChimerSeq STARFusion TCGA RNA-Seq ZC3H6-MAP2K5 ZC3H6 chr2 113082774 + MAP2K5 chr15 67923226 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 1 Out-of-frame Inter-chr q14.1 q23 STE:STE7 129403 ChimerSeq STARFusion TCGA RNA-Seq ATF7IP2-SMTN ATF7IP2 chr16 10481351 + SMTN chr22 31493255 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 Out-of-frame Inter-chr p13.2 q12.2 129404 ChimerSeq STARFusion TCGA RNA-Seq ATP11A-EXOC6B ATP11A chr13 113439571 + EXOC6B chr2 72606999 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 In-Frame Inter-chr q34 p13.2 129405 ChimerSeq STARFusion TCGA RNA-Seq ATP2C1-PHLDB2 ATP2C1 chr3 130699523 + PHLDB2 chr3 111632166 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 In-Frame Intra-chr q22.1 q13.2 129406 ChimerSeq STARFusion TCGA RNA-Seq BAD-NUP153 BAD chr11 64051654 - NUP153 chr6 17633075 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 In-Frame Inter-chr q13.1 p22.3 129407 ChimerSeq STARFusion TCGA RNA-Seq CASC3-RNPEP CASC3 chr17 38324201 + RNPEP chr1 201970504 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 In-Frame Inter-chr q21.1 q32.1 129408 ChimerSeq STARFusion TCGA RNA-Seq CHFR-MGAT3 CHFR chr12 133522207 - MGAT3 chr22 39883352 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 Out-of-frame Inter-chr q24.33 Tumor suppressor gene q13.1 129409 ChimerSeq STARFusion TCGA RNA-Seq CHST15-SKIL CHST15 chr10 125852985 - SKIL chr3 170077487 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 Out-of-frame Inter-chr q26.13 q26.2 Tumor suppressor gene Transcription factor 129410 ChimerSeq STARFusion TCGA RNA-Seq CNBP-LRCH3 CNBP chr3 128902619 - LRCH3 chr3 197574280 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 Out-of-frame Intra-chr q21.3 q29 129411 ChimerSeq STARFusion TCGA RNA-Seq COL6A3-CCZ1B COL6A3 chr2 238256450 - CCZ1B chr7 6862991 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 In-Frame Inter-chr q37.3 p22.1 129412 ChimerSeq STARFusion TCGA RNA-Seq CORO1C-SELPLG CORO1C chr12 109125205 - SELPLG chr12 109018088 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 5'UTR-5'UTR Intra-chr q24.11 q24.11 129413 ChimerSeq STARFusion TCGA RNA-Seq DCAF12-ARMC9 DCAF12 chr9 34125021 - ARMC9 chr2 232220510 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 Out-of-frame Inter-chr p13.3 q37.1 129414 ChimerSeq STARFusion TCGA RNA-Seq DIO3OS-PDLIM7 DIO3OS chr14 102024091 - PDLIM7 chr5 176916833 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 5'UTR-CDS Inter-chr q32.31 q35.3 129415 ChimerSeq STARFusion TCGA RNA-Seq DLAT-OSER1 DLAT chr11 111922073 + OSER1 chr20 42835638 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 Out-of-frame Inter-chr q23.1 q13.12 129416 ChimerSeq STARFusion TCGA RNA-Seq DOPEY2-NDUFAB1 DOPEY2 chr21 37537169 + NDUFAB1 chr16 23598640 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 In-Frame Inter-chr q22.12 p12.2 129417 ChimerSeq STARFusion TCGA RNA-Seq FBXL7-NMNAT3 FBXL7 chr5 15616181 + NMNAT3 chr3 139297897 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 CDS-5'UTR Inter-chr p15.1 q23 129418 ChimerSeq STARFusion TCGA RNA-Seq KCNB1-MICAL2 KCNB1 chr20 48098451 - MICAL2 chr11 12225797 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 Out-of-frame Inter-chr q13.13 p15.3 129419 ChimerSeq STARFusion TCGA RNA-Seq LDHB-PDE3A LDHB chr12 21807477 - PDE3A chr12 20709594 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 Out-of-frame Intra-chr p12.1 p12.2 129420 ChimerSeq STARFusion TCGA RNA-Seq LEPROT-ZZZ3 LEPROT chr1 65891061 + ZZZ3 chr1 78107340 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 CDS-5'UTR Intra-chr p31.3 p31.1 Transcription factor 129421 ChimerSeq STARFusion TCGA RNA-Seq MAP3K7CL-GALNT12 MAP3K7CL chr21 30532377 + GALNT12 chr9 101597531 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 Out-of-frame Inter-chr q21.3 q22.33 129422 ChimerSeq STARFusion TCGA RNA-Seq MATR3-UBAP2L MATR3 chr5 138629494 + UBAP2L chr1 154197560 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 5'UTR-5'UTR Inter-chr q31.2 q21.3 129423 ChimerSeq STARFusion TCGA RNA-Seq MEIS1-SVIL MEIS1 chr2 66670180 + SVIL chr10 29824998 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 Out-of-frame Inter-chr p14 Transcription factor p11.23 129424 ChimerSeq STARFusion TCGA RNA-Seq MOK-MARCH7 MOK chr14 102749815 - 2019_ 3_ 7_ chr2 160585520 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 Out-of-frame Inter-chr q32.31 CMGC:RCK q24.2 129425 ChimerSeq STARFusion TCGA RNA-Seq NOTCH2NL-PRKACB NOTCH2NL chr1 145281704 + PRKACB chr1 84700863 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 Out-of-frame Intra-chr q21.1 p31.1 129426 ChimerSeq STARFusion TCGA RNA-Seq NRDE2-TTC7B NRDE2 chr14 90798185 - TTC7B chr14 91124731 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 Out-of-frame Intra-chr q32.11 q32.11 129427 ChimerSeq STARFusion TCGA RNA-Seq NSUN3-SEC31A NSUN3 chr3 93783390 + SEC31A chr4 83750211 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 Out-of-frame Inter-chr q11.2 q21.22 129428 ChimerSeq STARFusion TCGA RNA-Seq PINX1-RP1L1 PINX1 chr8 10677703 - RP1L1 chr8 10480730 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 CDS-5'UTR Intra-chr p23.1 Tumor suppressor gene p23.1 129429 ChimerSeq STARFusion TCGA RNA-Seq PNMA6B-SAMD11 PNMA6B chrX 152343270 - SAMD11 chr1 861302 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 Out-of-frame Inter-chr q28 p36.33 129430 ChimerSeq STARFusion TCGA RNA-Seq S100PBP-RREB1 S100PBP chr1 33283290 + RREB1 chr6 7176888 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 5'UTR-5'UTR Inter-chr p35.1 p24.3 Transcription factor 129431 ChimerSeq STARFusion TCGA RNA-Seq SH3D19-LMOD1 SH3D19 chr4 152246393 - LMOD1 chr1 201869879 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 5'UTR-CDS Inter-chr q31.3 q32.1 129432 ChimerSeq STARFusion TCGA RNA-Seq SLC35A3-TROVE2 SLC35A3 chr1 100480976 + TROVE2 chr1 193038164 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 CDS-5'UTR Intra-chr p21.2 q31.2 129433 ChimerSeq STARFusion TCGA RNA-Seq SOCS5-ILKAP SOCS5 chr2 46926588 + ILKAP chr2 239082294 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 5'UTR-CDS Intra-chr p21 q37.3 129434 ChimerSeq STARFusion TCGA RNA-Seq STK11-GJC1 STK11 chr19 1207202 + GJC1 chr17 42884837 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 CDS-5'UTR Inter-chr p13.3 Oncogene Tumor suppressor gene q21.31 129435 ChimerSeq STARFusion TCGA RNA-Seq SVIL-CLIC4 SVIL chr10 29975482 - CLIC4 chr1 25140585 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 Out-of-frame Inter-chr p11.23 p36.11 129436 ChimerSeq STARFusion TCGA RNA-Seq TADA2B-SORCS2 TADA2B chr4 7045576 + SORCS2 chr4 7398015 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 In-Frame Intra-chr p16.1 p16.1 129437 ChimerSeq STARFusion TCGA RNA-Seq TIMM23B-AGAP6 TIMM23B chr10 51387763 + AGAP6 chr10 51749068 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 Out-of-frame Intra-chr q11.23 q11.23 129438 ChimerSeq STARFusion TCGA RNA-Seq TMEM240-MLLT4 TMEM240 chr1 1475064 - MLLT4 chr6 168325685 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 Out-of-frame Inter-chr p36.33 129439 ChimerSeq STARFusion TCGA RNA-Seq TMEM242-PHLDA3 TMEM242 chr6 157739814 - PHLDA3 chr1 201435306 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 CDS-3'UTR Inter-chr q25.3 q32.1 Tumor suppressor gene 129440 ChimerSeq STARFusion TCGA RNA-Seq TRIO-IPO11 TRIO chr5 14477072 + IPO11 chr5 61846194 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 In-Frame Intra-chr p15.2 q12.1 129441 ChimerSeq STARFusion TCGA RNA-Seq TTBK2-GRIK3 TTBK2 chr15 43164809 - GRIK3 chr1 37356697 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 In-Frame Inter-chr q15.2 CK1:TTBK p34.3 129442 ChimerSeq STARFusion TCGA RNA-Seq UEVLD-C11orf31 UEVLD chr11 18610160 - C11orf31 chr11 57510335 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 Out-of-frame Intra-chr p15.1 129443 ChimerSeq STARFusion TCGA RNA-Seq USP3-MLH1 USP3 chr15 63797029 + MLH1 chr3 37070275 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 Out-of-frame Inter-chr q22.31 p22.2 Oncogene Tumor suppressor gene 129444 ChimerSeq STARFusion TCGA RNA-Seq ZBED5-LPP ZBED5 chr11 10877691 - LPP chr3 188326949 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 Out-of-frame Inter-chr p15.4 Transcription factor q27.3 Oncogene 129445 ChimerSeq STARFusion TCGA RNA-Seq ZFAND3-DGKB ZFAND3 chr6 37897775 + DGKB chr7 14385016 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 Out-of-frame Inter-chr p21.2 p21.2 129446 ChimerSeq STARFusion TCGA RNA-Seq ZNF138-PNPLA8 ZNF138 chr7 64254949 + PNPLA8 chr7 108138021 - Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 Out-of-frame Intra-chr q11.21 Transcription factor q31.1 129447 ChimerSeq STARFusion TCGA RNA-Seq ZNF605-MGAT3 ZNF605 chr12 133522207 - MGAT3 chr22 39883352 + Exonic hg19 Non-Cancer TCGA-HU-A4GP-11A 2 0 Out-of-frame Inter-chr q24.33 Transcription factor q13.1 129448 ChimerSeq STARFusion TCGA RNA-Seq IGJ-FGF23 IGJ chr4 71521266 - FGF23 chr12 4479175 - Exonic hg19 Non-Cancer TCGA-CG-5721-11A 15 0 Out-of-frame Inter-chr p13.32 129449 ChimerSeq STARFusion TCGA RNA-Seq PGA5-WDR87 PGA5 chr11 61013491 + WDR87 chr19 38379684 - Exonic hg19 Non-Cancer TCGA-CG-5721-11A 8 0 Out-of-frame Inter-chr q12.2 q13.13 129450 ChimerSeq STARFusion TCGA RNA-Seq LSR-IGHJ4 LSR chr19 35749910 + IGHJ4 chr14 106330469 - Exonic hg19 Non-Cancer TCGA-CG-5721-11A 5 0 Out-of-frame Inter-chr q13.12 129451 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-CG-5721-11A 5 0 Out-of-frame Inter-chr q21 q13.42 129452 ChimerSeq STARFusion TCGA RNA-Seq GNAQ-VPS13B GNAQ chr9 80646016 - VPS13B chr8 100654039 + Exonic hg19 Non-Cancer TCGA-CG-5721-11A 3 0 Out-of-frame Inter-chr q21.2 Oncogene q22.2 129453 ChimerSeq STARFusion TCGA RNA-Seq IGLJ2-FKBP2 IGLJ2 chr22 23241835 + FKBP2 chr11 64010716 + Exonic hg19 Non-Cancer TCGA-CG-5721-11A 3 0 Out-of-frame Inter-chr q11.22 q13.1 129454 ChimerSeq STARFusion TCGA RNA-Seq LIPF-C3orf20 LIPF chr10 90428394 + C3orf20 chr3 14724311 + Exonic hg19 Non-Cancer TCGA-CG-5721-11A 3 0 Out-of-frame Inter-chr q23.31 p25.1 129455 ChimerSeq STARFusion TCGA RNA-Seq PGC-GKN1 PGC chr6 41712398 - GKN1 chr2 69201768 + Exonic hg19 Non-Cancer TCGA-CG-5721-11A 3 0 Out-of-frame Inter-chr p21.1 p13.3 Tumor suppressor gene 129456 ChimerSeq STARFusion TCGA RNA-Seq POGZ-NFIC POGZ chr1 151375200 - NFIC chr19 3439332 + Exonic hg19 Non-Cancer TCGA-CG-5721-11A 3 0 Out-of-frame Inter-chr q21.3 p13.3 Transcription factor 129457 ChimerSeq STARFusion TCGA RNA-Seq RAB3D-IGHA2 RAB3D chr19 11434539 - IGHA2 chr14 106054081 - Exonic hg19 Non-Cancer TCGA-CG-5721-11A 3 0 Out-of-frame Inter-chr p13.2 129458 ChimerSeq STARFusion TCGA RNA-Seq TFF1-AVIL TFF1 chr21 43782401 - AVIL chr12 58199947 - Exonic hg19 Non-Cancer TCGA-CG-5721-11A 3 0 Out-of-frame Inter-chr q22.3 q14.1 129459 ChimerSeq STARFusion TCGA RNA-Seq AKAP8-UPF1 AKAP8 chr19 15487787 - UPF1 chr19 18956789 + Exonic hg19 Non-Cancer TCGA-CG-5721-11A 2 0 Out-of-frame Intra-chr p13.12 Transcription factor p13.11 129460 ChimerSeq STARFusion TCGA RNA-Seq ATP4B-CNDP2 ATP4B chr13 114307636 - CNDP2 chr18 72186184 + Exonic hg19 Non-Cancer TCGA-CG-5721-11A 2 0 Out-of-frame Inter-chr q34 q22.3 Tumor suppressor gene 129461 ChimerSeq STARFusion TCGA RNA-Seq CEP85L-RUVBL2 CEP85L chr6 118953616 - RUVBL2 chr19 49506536 + Exonic hg19 Non-Cancer TCGA-CG-5721-11A 2 0 Out-of-frame Inter-chr q22.31 q13.33 129462 ChimerSeq STARFusion TCGA RNA-Seq COL4A3BP-CYSTM1 COL4A3BP chr5 74801807 - CYSTM1 chr5 139574031 + Exonic hg19 Non-Cancer TCGA-CG-5721-11A 2 0 Out-of-frame Intra-chr q13.3 q31.3 129463 ChimerSeq STARFusion TCGA RNA-Seq FSIP2-NCKAP1 FSIP2 chr2 186629292 + NCKAP1 chr2 183818059 - Exonic hg19 Non-Cancer TCGA-CG-5721-11A 2 0 Out-of-frame Intra-chr q32.1 q32.1 129464 ChimerSeq STARFusion TCGA RNA-Seq FUS-NBR1 FUS chr16 31196500 + NBR1 chr17 41355698 + Exonic hg19 Non-Cancer TCGA-CG-5721-11A 2 0 In-Frame Inter-chr p11.2 Tumor suppressor gene q21.31 129465 ChimerSeq STARFusion TCGA RNA-Seq ITFG1-PHKB ITFG1 chr16 47462715 - PHKB chr16 47531310 + Exonic hg19 Non-Cancer TCGA-CG-5721-11A 2 0 Out-of-frame Intra-chr q12.1 q12.1 129466 ChimerSeq STARFusion TCGA RNA-Seq JHDM1D-RHEB JHDM1D chr7 139876544 - RHEB chr7 151188100 - Exonic hg19 Non-Cancer TCGA-CG-5721-11A 2 0 Out-of-frame Intra-chr q36.1 Oncogene 129467 ChimerSeq STARFusion TCGA RNA-Seq NBPF12-FUS NBPF12 chr1 146378873 + FUS chr16 31199646 + Exonic hg19 Non-Cancer TCGA-CG-5721-11A 2 0 Out-of-frame Inter-chr q21.1 p11.2 Tumor suppressor gene 129468 ChimerSeq STARFusion TCGA RNA-Seq PHACTR2-SH3BGRL2 PHACTR2 chr6 143858344 + SH3BGRL2 chr6 80383331 + Exonic hg19 Non-Cancer TCGA-CG-5721-11A 2 0 Out-of-frame Intra-chr q24.2 q14.1 129469 ChimerSeq STARFusion TCGA RNA-Seq RBM5-SLC15A2 RBM5 chr3 50131308 + SLC15A2 chr3 121658196 + Exonic hg19 Non-Cancer TCGA-CG-5721-11A 2 0 In-Frame Intra-chr p21.31 Tumor suppressor gene q13.33 129470 ChimerSeq STARFusion TCGA RNA-Seq RBM6-SLC15A2 RBM6 chr3 50131308 + SLC15A2 chr3 121658196 + Exonic hg19 Non-Cancer TCGA-CG-5721-11A 2 0 Out-of-frame Intra-chr p21.31 Tumor suppressor gene q13.33 129471 ChimerSeq STARFusion TCGA RNA-Seq TMEM234-FAM177B TMEM234 chr1 32686732 - FAM177B chr1 222919873 + Exonic hg19 Non-Cancer TCGA-CG-5721-11A 2 0 Out-of-frame Intra-chr p35.2 q41 129472 ChimerSeq STARFusion TCGA RNA-Seq TMEM8A-PPP1R12C TMEM8A chr16 431701 - PPP1R12C chr19 55607703 - Exonic hg19 Non-Cancer TCGA-CG-5721-11A 2 0 Out-of-frame Inter-chr p13.3 q13.42 129473 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGH@ STK25 chr2 242434915 - IGH@ chr14 106175004 - Exonic hg19 Non-Cancer TCGA-BR-7715-11A 381 0 Out-of-frame Inter-chr q37.3 32.33 129474 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGHA1 STK25 chr2 242434915 - IGHA1 chr14 106175004 - Exonic hg19 Non-Cancer TCGA-BR-7715-11A 381 0 Out-of-frame Inter-chr q37.3 129475 ChimerSeq STARFusion TCGA RNA-Seq RN7SL5P-IFI6 RN7SL5P chr9 9442291 + IFI6 chr1 27992764 - Exonic hg19 Non-Cancer TCGA-BR-7715-11A 26 3 Out-of-frame Inter-chr p23 p35.3 129476 ChimerSeq STARFusion TCGA RNA-Seq IGJ-FGF23 IGJ chr4 71521266 - FGF23 chr12 4479175 - Exonic hg19 Non-Cancer TCGA-BR-7715-11A 18 0 Out-of-frame Inter-chr p13.32 129477 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BR-7715-11A 15 0 Out-of-frame Intra-chr q11.22 q11.23 129478 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BR-7715-11A 15 0 Out-of-frame Intra-chr q11.22 q11.22 129479 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44648235 - Exonic hg19 Non-Cancer TCGA-BR-7715-11A 13 0 CDS-5'UTR Intra-chr q21.31 129480 ChimerSeq STARFusion TCGA RNA-Seq PGC-PGA3 PGC chr6 41705488 - PGA3 chr11 60970989 + Exonic hg19 Non-Cancer TCGA-BR-7715-11A 6 6 Out-of-frame Inter-chr p21.1 q12.2 129481 ChimerSeq STARFusion TCGA RNA-Seq IGJ-FGF23 IGJ chr4 71521266 - FGF23 chr12 4479175 - Exonic hg19 Non-Cancer TCGA-BR-6802-11A 14 0 Out-of-frame Inter-chr p13.32 129482 ChimerSeq STARFusion TCGA RNA-Seq MUC5AC-RGS5 MUC5AC chr11 1222353 + RGS5 chr1 163116056 - Exonic hg19 Non-Cancer TCGA-BR-6802-11A 7 0 Out-of-frame Inter-chr q23.3 129483 ChimerSeq STARFusion TCGA RNA-Seq OR51S1-TP53I11 OR51S1 chr11 4869899 - TP53I11 chr11 44954601 - Exonic hg19 Non-Cancer TCGA-BR-6802-11A 4 0 Out-of-frame Intra-chr p15.4 p11.2 129484 ChimerSeq STARFusion TCGA RNA-Seq JDP2-TFF1 JDP2 chr14 75936698 + TFF1 chr21 43782507 - Exonic hg19 Non-Cancer TCGA-BR-6802-11A 3 0 Out-of-frame Inter-chr q24.3 Tumor suppressor gene Transcription factor q22.3 129485 ChimerSeq STARFusion TCGA RNA-Seq PGC-NELFA PGC chr6 41704462 - NELFA chr4 2005595 - Exonic hg19 Non-Cancer TCGA-BR-6802-11A 3 0 Out-of-frame Inter-chr p21.1 p16.3 129486 ChimerSeq STARFusion TCGA RNA-Seq PPP1R11-RNF39 PPP1R11 chr6 30038008 + RNF39 chr6 30038111 - Exonic hg19 Non-Cancer TCGA-BR-6802-11A 3 0 Out-of-frame Intra-chr 129487 ChimerSeq STARFusion TCGA RNA-Seq ACTR2-UGP2 ACTR2 chr2 65492309 + UGP2 chr2 64109600 + Exonic hg19 Non-Cancer TCGA-BR-6802-11A 2 0 In-Frame Intra-chr p14 TKL:STKR p15 129488 ChimerSeq STARFusion TCGA RNA-Seq CAPN7-RAB10 CAPN7 chr3 15248104 + RAB10 chr2 26321531 + Exonic hg19 Non-Cancer TCGA-BR-6802-11A 2 0 Out-of-frame Inter-chr p25.1 p23.3 129489 ChimerSeq STARFusion TCGA RNA-Seq CREB3L2-MACC1 CREB3L2 chr7 137686350 - MACC1 chr7 20194004 - Exonic hg19 Non-Cancer TCGA-BR-6802-11A 2 0 In-Frame Intra-chr q33 Transcription factor p21.1 129490 ChimerSeq STARFusion TCGA RNA-Seq FAM168B-FHL2 FAM168B chr2 131829428 - FHL2 chr2 106002997 - Exonic hg19 Non-Cancer TCGA-BR-6802-11A 2 0 CDS-5'UTR Intra-chr q21.1 q12.2 129491 ChimerSeq STARFusion TCGA RNA-Seq FAM60A-GRAMD4 FAM60A chr12 31478958 - GRAMD4 chr22 47054084 + Exonic hg19 Non-Cancer TCGA-BR-6802-11A 2 0 Out-of-frame Inter-chr q13.31 129492 ChimerSeq STARFusion TCGA RNA-Seq GOLGA3-TKT GOLGA3 chr12 133405389 - TKT chr3 53276258 - Exonic hg19 Non-Cancer TCGA-BR-6802-11A 2 0 5'UTR-CDS Inter-chr q24.33 p21.1 Tumor suppressor gene 129493 ChimerSeq STARFusion TCGA RNA-Seq HPS1-HADH HPS1 chr10 100202881 - HADH chr4 108940696 + Exonic hg19 Non-Cancer TCGA-BR-6802-11A 2 0 Out-of-frame Inter-chr q24.2 q25 129494 ChimerSeq STARFusion TCGA RNA-Seq HSPG2-CYSTM1 HSPG2 chr1 22263648 - CYSTM1 chr5 139574031 + Exonic hg19 Non-Cancer TCGA-BR-6802-11A 2 0 Out-of-frame Inter-chr p36.12 q31.3 129495 ChimerSeq STARFusion TCGA RNA-Seq LGALS3-HN1L LGALS3 chr14 55596018 + HN1L chr16 1735440 + Exonic hg19 Non-Cancer TCGA-BR-6802-11A 2 0 5'UTR-CDS Inter-chr q22.3 129496 ChimerSeq STARFusion TCGA RNA-Seq LINC01014-KCNMB2 LINC01014 chr3 178137163 + KCNMB2 chr3 178525131 + Exonic hg19 Non-Cancer TCGA-BR-6802-11A 2 0 Out-of-frame Intra-chr q26.32 q26.32 129497 ChimerSeq STARFusion TCGA RNA-Seq NUMA1-BSCL2 NUMA1 chr11 71780888 - BSCL2 chr11 62474796 - Exonic hg19 Non-Cancer TCGA-BR-6802-11A 2 0 5'UTR-3'UTR Intra-chr q13.4 Oncogene q12.3 129498 ChimerSeq STARFusion TCGA RNA-Seq PPP2R1A-ETHE1 PPP2R1A chr19 52693427 + ETHE1 chr19 44015718 - Exonic hg19 Non-Cancer TCGA-BR-6802-11A 2 0 In-Frame Intra-chr q13.41 Oncogene q13.31 129499 ChimerSeq STARFusion TCGA RNA-Seq RASA2-A4GNT RASA2 chr3 141272782 + A4GNT chr3 137850124 - Exonic hg19 Non-Cancer TCGA-BR-6802-11A 2 0 CDS-5'UTR Intra-chr q23 q22.3 129500 ChimerSeq STARFusion TCGA RNA-Seq SENP7-ATXN10 SENP7 chr3 101177799 - ATXN10 chr22 46096162 + Exonic hg19 Non-Cancer TCGA-BR-6802-11A 2 0 Out-of-frame Inter-chr q12.3 q13.31 129501 ChimerSeq STARFusion TCGA RNA-Seq TNPO2-PHF20 TNPO2 chr19 12830075 - PHF20 chr20 34389413 + Exonic hg19 Non-Cancer TCGA-BR-6802-11A 2 0 Out-of-frame Inter-chr p13.13 q11.22 Transcription factor 129502 ChimerSeq STARFusion TCGA RNA-Seq TTC3-KLF8 TTC3 chr21 38445773 + KLF8 chrX 56291613 + Exonic hg19 Non-Cancer TCGA-BR-6802-11A 2 0 Out-of-frame Inter-chr q22.13 p11.21 Transcription factor 129503 ChimerSeq STARFusion TCGA RNA-Seq U3-KCTD1 U3 chr18 24283356 - KCTD1 chr18 24081214 - Exonic hg19 Non-Cancer TCGA-BR-6802-11A 2 0 Out-of-frame Intra-chr q11.2 129504 ChimerSeq STARFusion TCGA RNA-Seq YWHAB-CAPN8 YWHAB chr20 43530474 + CAPN8 chr1 223718212 - Exonic hg19 Non-Cancer TCGA-BR-6802-11A 2 0 In-Frame Inter-chr q13.12 q41 129505 ChimerSeq STARFusion TCGA RNA-Seq DNAJB1-TECRP1 DNAJB1 chr19 14640453 - TECRP1 chr4 87871122 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 7 1 Out-of-frame Inter-chr p13.12 Tumor suppressor gene q21.3 129506 ChimerSeq STARFusion TCGA RNA-Seq DNAJB1-TECRP1 DNAJB1 chr19 14640442 - TECRP1 chr4 87871187 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 7 1 Out-of-frame Inter-chr p13.12 Tumor suppressor gene q21.3 129507 ChimerSeq STARFusion TCGA RNA-Seq MIR3615-SLC9A3R1 MIR3615 chr17 72744775 - SLC9A3R1 chr17 72745291 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 6 3 Out-of-frame Intra-chr q25.1 q25.1 Tumor suppressor gene 129508 ChimerSeq STARFusion TCGA RNA-Seq MIR3615-SLC9A3R1 MIR3615 chr17 72744768 - SLC9A3R1 chr17 72745298 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 4 3 Out-of-frame Intra-chr q25.1 q25.1 Tumor suppressor gene 129509 ChimerSeq STARFusion TCGA RNA-Seq BRI3BP-UBC BRI3BP chr12 125478549 + UBC chr12 125398320 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 4 0 CDS-5'UTR Intra-chr q24.31 q24.31 129510 ChimerSeq STARFusion TCGA RNA-Seq GABPA-KRT6A GABPA chr21 27107206 + KRT6A chr12 52881537 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 4 0 Out-of-frame Inter-chr q21.3 Transcription factor q13.13 129511 ChimerSeq STARFusion TCGA RNA-Seq MIPEPP3-ABHD12 MIPEPP3 chr13 21872464 + ABHD12 chr20 25371382 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 4 0 Out-of-frame Inter-chr q12.11 p11.21 129512 ChimerSeq STARFusion TCGA RNA-Seq MIR3615-SLC9A3R1 MIR3615 chr17 72744778 - SLC9A3R1 chr17 72758150 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 3 3 5'UTR-CDS Intra-chr q25.1 q25.1 Tumor suppressor gene 129513 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 3 1 3'UTR-3'UTR Intra-chr 129514 ChimerSeq STARFusion TCGA RNA-Seq MALAT1-CEACAM6 MALAT1 chr11 65267143 + CEACAM6 chr19 42259438 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 3 1 Out-of-frame Inter-chr q13.1 q13.2 129515 ChimerSeq STARFusion TCGA RNA-Seq AHNAK-BRD4 AHNAK chr11 62295348 - BRD4 chr19 15354172 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 3 0 Out-of-frame Inter-chr q12.3 Tumor suppressor gene p13.12 Atypical:BRD 129516 ChimerSeq STARFusion TCGA RNA-Seq ATP2C2-CSNK1E ATP2C2 chr16 84432215 + CSNK1E chr22 38692692 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 3 0 Out-of-frame Inter-chr q24.1 q13.1 129517 ChimerSeq STARFusion TCGA RNA-Seq CRIP2-CCNG2 CRIP2 chr14 105941242 + CCNG2 chr4 78079686 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 3 0 Out-of-frame Inter-chr q32.33 q21.1 129518 ChimerSeq STARFusion TCGA RNA-Seq FAM193B-NFKBIA FAM193B chr5 176958430 - NFKBIA chr14 35871212 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 3 0 Out-of-frame Inter-chr q35.3 q13.2 129519 ChimerSeq STARFusion TCGA RNA-Seq FNIP2-BPIFB2 FNIP2 chr4 159826128 + BPIFB2 chr20 31600603 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 3 0 Out-of-frame Inter-chr q32.1 q11.21 129520 ChimerSeq STARFusion TCGA RNA-Seq JSRP1-RPS28 JSRP1 chr19 2269549 - RPS28 chr19 8386392 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 3 0 Out-of-frame Intra-chr p13.3 p13.2 129521 ChimerSeq STARFusion TCGA RNA-Seq KRT4-MYL6 KRT4 chr12 53207632 - MYL6 chr12 56555171 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 3 0 Out-of-frame Intra-chr q13.13 q13.2 129522 ChimerSeq STARFusion TCGA RNA-Seq LTBR-KRT6A LTBR chr12 6484492 + KRT6A chr12 52886998 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 3 0 Out-of-frame Intra-chr p13.31 q13.13 129523 ChimerSeq STARFusion TCGA RNA-Seq PABPN1-BPIFB1 PABPN1 chr14 23794512 + BPIFB1 chr20 31871020 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 3 0 Out-of-frame Inter-chr q11.2 q11.21 129524 ChimerSeq STARFusion TCGA RNA-Seq PITX1-CRNN PITX1 chr5 134369707 - CRNN chr1 152381746 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 3 0 Out-of-frame Inter-chr q31.1 Transcription factor q21.3 Tumor suppressor gene 129525 ChimerSeq STARFusion TCGA RNA-Seq PRR4-SPRR1B PRR4 chr12 10999945 - SPRR1B chr1 153003679 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 3 0 Out-of-frame Inter-chr q21.3 129526 ChimerSeq STARFusion TCGA RNA-Seq SNX22-RPL29 SNX22 chr15 64448134 + RPL29 chr3 52027831 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 3 0 Out-of-frame Inter-chr q22.31 p21.2 129527 ChimerSeq STARFusion TCGA RNA-Seq THUMPD3-USP54 THUMPD3 chr3 9427516 + USP54 chr10 75257824 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 3 0 Out-of-frame Inter-chr p25.3 q22.2 129528 ChimerSeq STARFusion TCGA RNA-Seq HOMER2-HDGFRP3 HOMER2 chr15 83621283 - HDGFRP3 chr15 83832827 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 1 Out-of-frame Intra-chr q25.2 Tumor suppressor gene 129529 ChimerSeq STARFusion TCGA RNA-Seq ST3GAL1-NDRG1 ST3GAL1 chr8 134583936 - NDRG1 chr8 134296572 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 1 5'UTR-5'UTR Intra-chr q24.22 q24.22 Tumor suppressor gene 129530 ChimerSeq STARFusion TCGA RNA-Seq ASAP1-PTK2 ASAP1 chr8 131370263 - PTK2 chr8 141685598 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 In-Frame Intra-chr q24.22 q24.3 129531 ChimerSeq STARFusion TCGA RNA-Seq ATF7IP-PLEKHA5 ATF7IP chr12 14518761 + PLEKHA5 chr12 19473496 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 5'UTR-CDS Intra-chr p13.1 p12.3 129532 ChimerSeq STARFusion TCGA RNA-Seq BTAF1-HNRNPH3 BTAF1 chr10 93683847 + HNRNPH3 chr10 70098897 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 Out-of-frame Intra-chr q23.32 q21.3 129533 ChimerSeq STARFusion TCGA RNA-Seq C1orf159-SSU72 C1orf159 chr1 1051440 - SSU72 chr1 1500296 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 5'UTR-CDS Intra-chr p36.33 p36.33 129534 ChimerSeq STARFusion TCGA RNA-Seq C9orf3-KLHL5 C9orf3 chr9 97767898 + KLHL5 chr4 39077585 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 Out-of-frame Inter-chr q22.32 p14 129535 ChimerSeq STARFusion TCGA RNA-Seq CALM2-PSPC1 CALM2 chr2 47403580 - PSPC1 chr13 20283739 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 In-Frame Inter-chr p21 q12.11 129536 ChimerSeq STARFusion TCGA RNA-Seq CCDC74A-PTPN12 CCDC74A chr2 132286200 + PTPN12 chr7 77214860 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 Out-of-frame Inter-chr q21.1 q11.23 Tumor suppressor gene 129537 ChimerSeq STARFusion TCGA RNA-Seq CDH1-USP10 CDH1 chr16 68835796 + USP10 chr16 84806147 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 In-Frame Intra-chr q22.1 Oncogene Tumor suppressor gene q24.1 129538 ChimerSeq STARFusion TCGA RNA-Seq CNN2-PPP1R12C CNN2 chr19 1032695 + PPP1R12C chr19 55607703 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 In-Frame Intra-chr p13.3 q13.42 129539 ChimerSeq STARFusion TCGA RNA-Seq CRY1-RAD23B CRY1 chr12 107486582 - RAD23B chr9 110073963 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 Out-of-frame Inter-chr q23.3 q31.2 Tumor suppressor gene 129540 ChimerSeq STARFusion TCGA RNA-Seq CTBP2-ZNF362 CTBP2 chr10 126727566 - ZNF362 chr1 33741701 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 Out-of-frame Inter-chr q26.13 p35.1 Transcription factor 129541 ChimerSeq STARFusion TCGA RNA-Seq DCAF15-MRPL9 DCAF15 chr19 14065473 + MRPL9 chr1 151734028 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 In-Frame Inter-chr p13.12 q21.3 129542 ChimerSeq STARFusion TCGA RNA-Seq DOCK9-CLIC4 DOCK9 chr13 99738477 - CLIC4 chr1 25140585 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 Out-of-frame Inter-chr q32.3 p36.11 129543 ChimerSeq STARFusion TCGA RNA-Seq DSC3-RPS6 DSC3 chr18 28576757 - RPS6 chr9 19378916 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 CDS-3'UTR Inter-chr q12.1 Tumor suppressor gene p22.1 129544 ChimerSeq STARFusion TCGA RNA-Seq DYNLL1-IREB2 DYNLL1 chr12 120907907 + IREB2 chr15 78755264 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 5'UTR-CDS Inter-chr q24.31 q25.1 129545 ChimerSeq STARFusion TCGA RNA-Seq FNDC3B-PTPLB FNDC3B chr3 171757561 + PTPLB chr3 123247321 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 5'UTR-CDS Intra-chr q26.31 129546 ChimerSeq STARFusion TCGA RNA-Seq GATAD2B-DENND2C GATAD2B chr1 153788749 - DENND2C chr1 115153738 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 In-Frame Intra-chr Transcription factor p13.2 129547 ChimerSeq STARFusion TCGA RNA-Seq GBF1-FKBP5 GBF1 chr10 104005538 + FKBP5 chr6 35565181 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 5'UTR-CDS Inter-chr q24.32 p21.31 129548 ChimerSeq STARFusion TCGA RNA-Seq GMDS-FARS2 GMDS chr6 2116005 - FARS2 chr6 5613402 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 Out-of-frame Intra-chr p25.3 p25.1 129549 ChimerSeq STARFusion TCGA RNA-Seq KDM4B-TPD52L2 KDM4B chr19 5047680 + TPD52L2 chr20 62514072 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 In-Frame Inter-chr p13.3 q13.33 129550 ChimerSeq STARFusion TCGA RNA-Seq LARS2-LIMD1 LARS2 chr3 45565600 + LIMD1 chr3 45677642 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 In-Frame Intra-chr p21.31 p21.31 Tumor suppressor gene 129551 ChimerSeq STARFusion TCGA RNA-Seq LIMA1-PPHLN1 LIMA1 chr12 50677203 - PPHLN1 chr12 42778742 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 Out-of-frame Intra-chr q13.12 Tumor suppressor gene q12 129552 ChimerSeq STARFusion TCGA RNA-Seq LYPLAL1-RRP15 LYPLAL1 chr1 219352588 + RRP15 chr1 218504290 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 Out-of-frame Intra-chr q41 q41 129553 ChimerSeq STARFusion TCGA RNA-Seq MAML3-ARHGAP10 MAML3 chr4 141074014 - ARHGAP10 chr4 148944414 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 Out-of-frame Intra-chr q31.1 q31.23 129554 ChimerSeq STARFusion TCGA RNA-Seq MFN2-SVIL MFN2 chr1 12040541 + SVIL chr10 29752564 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 5'UTR-CDS Inter-chr p36.22 p11.23 129555 ChimerSeq STARFusion TCGA RNA-Seq MNAT1-NUMB MNAT1 chr14 61201669 + NUMB chr14 73876776 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 CDS-5'UTR Intra-chr q23.1 q24.3 Tumor suppressor gene 129556 ChimerSeq STARFusion TCGA RNA-Seq MUC21-EPN2 MUC21 chr6 30951796 + EPN2 chr17 19213198 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 In-Frame Inter-chr p11.2 129557 ChimerSeq STARFusion TCGA RNA-Seq MYCBP2-NDUFS1 MYCBP2 chr13 77870734 - NDUFS1 chr2 207018406 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 Out-of-frame Inter-chr q22.3 129558 ChimerSeq STARFusion TCGA RNA-Seq NADK2-BAZ2B NADK2 chr5 36225644 - BAZ2B chr2 160206868 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 Out-of-frame Inter-chr p13.2 q24.2 Transcription factor 129559 ChimerSeq STARFusion TCGA RNA-Seq NOP2-RPLP1 NOP2 chr12 6676982 - RPLP1 chr15 69747509 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 Out-of-frame Inter-chr p13.31 q23 129560 ChimerSeq STARFusion TCGA RNA-Seq NUMB-YLPM1 NUMB chr14 73876645 - YLPM1 chr14 75295916 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 Out-of-frame Intra-chr q24.3 Tumor suppressor gene q24.3 129561 ChimerSeq STARFusion TCGA RNA-Seq PCM1-SPRR2E PCM1 chr8 17849209 + SPRR2E chr1 153067001 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 CDS-5'UTR Inter-chr p22 q21.3 129562 ChimerSeq STARFusion TCGA RNA-Seq PM20D2-HIPK2 PM20D2 chr6 89856328 + HIPK2 chr7 139313785 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 In-Frame Inter-chr q15 q34 CMGC:DYRK Tumor suppressor gene 129563 ChimerSeq STARFusion TCGA RNA-Seq PPFIBP1-ARNTL2 PPFIBP1 chr12 27677298 + ARNTL2 chr12 27521195 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 5'UTR-CDS Intra-chr p11.23 p11.23 Transcription factor 129564 ChimerSeq STARFusion TCGA RNA-Seq PPP2R1A-ZNF702P PPP2R1A chr19 52693427 + ZNF702P chr19 53474095 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 CDS-3'UTR Intra-chr q13.41 Oncogene q13.41 129565 ChimerSeq STARFusion TCGA RNA-Seq PROSER2-C16orf62 PROSER2 chr10 11894214 + C16orf62 chr16 19710824 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 Out-of-frame Inter-chr p14 p12.3 129566 ChimerSeq STARFusion TCGA RNA-Seq RC3H2-ZBTB26 RC3H2 chr9 125667389 - ZBTB26 chr9 125682223 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 5'UTR-5'UTR Intra-chr q33.2 q33.2 Transcription factor 129567 ChimerSeq STARFusion TCGA RNA-Seq RCC1-PIH1D1 RCC1 chr1 28832596 + PIH1D1 chr19 49952911 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 5'UTR-CDS Inter-chr p35.3 q13.33 129568 ChimerSeq STARFusion TCGA RNA-Seq RPL19-CACNB1 RPL19 chr17 37357572 + CACNB1 chr17 37351223 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 Out-of-frame Intra-chr q12 q12 129569 ChimerSeq STARFusion TCGA RNA-Seq SEPT9-BCAR1 SEPT9 chr17 75398785 + BCAR1 chr16 75269884 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 Out-of-frame Inter-chr q23.1 129570 ChimerSeq STARFusion TCGA RNA-Seq SGPP2-SPAG16 SGPP2 chr2 223339445 + SPAG16 chr2 214161986 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 In-Frame Intra-chr q36.1 q34 129571 ChimerSeq STARFusion TCGA RNA-Seq SNHG3-PIH1D1 SNHG3 chr1 28832596 + PIH1D1 chr19 49952911 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 5'UTR-CDS Inter-chr p35.3 q13.33 129572 ChimerSeq STARFusion TCGA RNA-Seq SNX6-CNIH1 SNX6 chr14 35099113 - CNIH1 chr14 54897122 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 Out-of-frame Intra-chr q13.1 q22.2 129573 ChimerSeq STARFusion TCGA RNA-Seq SORBS1-PDLIM1 SORBS1 chr10 97250792 - PDLIM1 chr10 97007123 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 5'UTR-CDS Intra-chr q24.1 q23.33 129574 ChimerSeq STARFusion TCGA RNA-Seq SRGAP1-PPP1R12A SRGAP1 chr12 64491155 + PPP1R12A chr12 80266718 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 Out-of-frame Intra-chr q14.2 q21.31 129575 ChimerSeq STARFusion TCGA RNA-Seq SSH2-PAN3 SSH2 chr17 28088168 - PAN3 chr13 28830429 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 Out-of-frame Inter-chr q11.2 q12.2 129576 ChimerSeq STARFusion TCGA RNA-Seq TBC1D22B-BTBD9 TBC1D22B chr6 37237426 + BTBD9 chr6 38565897 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 CDS-5'UTR Intra-chr p21.2 p21.2 129577 ChimerSeq STARFusion TCGA RNA-Seq TIAM1-SF3B3 TIAM1 chr21 32711558 - SF3B3 chr16 70597779 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 Out-of-frame Inter-chr q22.11 q22.1 129578 ChimerSeq STARFusion TCGA RNA-Seq TM4SF19-NGLY1 TM4SF19 chr3 196065135 - NGLY1 chr3 25775473 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 5'UTR-CDS Intra-chr q29 p24.2 129579 ChimerSeq STARFusion TCGA RNA-Seq TM4SF19-NGLY1 TM4SF19 chr3 196065135 - NGLY1 chr3 25775473 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 5'UTR-CDS Intra-chr q29 p24.2 129580 ChimerSeq STARFusion TCGA RNA-Seq TRIM22-SLC35G2 TRIM22 chr11 5719775 + SLC35G2 chr3 136573285 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 CDS-5'UTR Inter-chr p15.4 q22.3 129581 ChimerSeq STARFusion TCGA RNA-Seq TUBD1-CLTC TUBD1 chr17 57970058 - CLTC chr17 57721637 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 Out-of-frame Intra-chr q23.1 q23.1 129582 ChimerSeq STARFusion TCGA RNA-Seq ZC3H11A-ATF7IP ZC3H11A chr1 203764922 + ATF7IP chr12 14576843 + Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 Out-of-frame Inter-chr q32.1 p13.1 129583 ChimerSeq STARFusion TCGA RNA-Seq ZFX-APOO ZFX chrX 24167911 + APOO chrX 23897151 - Exonic hg19 Non-Cancer TCGA-IP-7968-11A 2 0 5'UTR-CDS Intra-chr p22.11 Transcription factor p22.11 129584 ChimerSeq STARFusion TCGA RNA-Seq KRT8P4-DES KRT8P4 chr8 90425097 - DES chr2 220288498 + Exonic hg19 Non-Cancer TCGA-HU-A4GH-11A 128 0 Out-of-frame Inter-chr q21.3 q35 129585 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-HU-A4GH-11A 18 6 Out-of-frame Intra-chr q11.22 q11.23 129586 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-HU-A4GH-11A 18 5 Out-of-frame Intra-chr q11.22 q11.22 129587 ChimerSeq STARFusion TCGA RNA-Seq MALAT1-MYH11 MALAT1 chr11 65268545 + MYH11 chr16 15815340 - Exonic hg19 Non-Cancer TCGA-HU-A4GH-11A 3 15 Out-of-frame Inter-chr q13.1 Oncogene 129588 ChimerSeq STARFusion TCGA RNA-Seq KRT8P4-DES KRT8P4 chr8 90425097 - DES chr2 220288498 + Exonic hg19 Non-Cancer TCGA-HU-A4GY-11A 116 0 Out-of-frame Inter-chr q21.3 q35 129589 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-HU-A4GY-11A 10 6 Out-of-frame Intra-chr q11.22 q11.23 129590 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-HU-A4GY-11A 10 6 Out-of-frame Intra-chr q11.22 q11.22 129591 ChimerSeq STARFusion TCGA RNA-Seq MYH11-CALD1 MYH11 chr16 15818114 - CALD1 chr7 134618325 + Exonic hg19 Non-Cancer TCGA-HU-A4GY-11A 3 15 Out-of-frame Inter-chr Oncogene q33 129592 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGH@ STK25 chr2 242434915 - IGH@ chr14 106175004 - Exonic hg19 Non-Cancer TCGA-BR-6458-11A 436 0 Out-of-frame Inter-chr q37.3 32.33 129593 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGHA1 STK25 chr2 242434915 - IGHA1 chr14 106175004 - Exonic hg19 Non-Cancer TCGA-BR-6458-11A 436 0 Out-of-frame Inter-chr q37.3 129594 ChimerSeq STARFusion TCGA RNA-Seq PGA3-OTOF PGA3 chr11 60992874 + OTOF chr2 26686987 - Exonic hg19 Non-Cancer TCGA-BR-6458-11A 80 0 Out-of-frame Inter-chr q12.2 p23.3 129595 ChimerSeq STARFusion TCGA RNA-Seq FBXW8-PGA3 FBXW8 chr12 117423188 + PGA3 chr11 60978559 + Exonic hg19 Non-Cancer TCGA-BR-6458-11A 62 0 Out-of-frame Inter-chr q24.22 q12.2 129596 ChimerSeq STARFusion TCGA RNA-Seq PGC-PGA3 PGC chr6 41705523 - PGA3 chr11 60970989 + Exonic hg19 Non-Cancer TCGA-BR-6458-11A 24 45 Out-of-frame Inter-chr p21.1 q12.2 129597 ChimerSeq STARFusion TCGA RNA-Seq STOX1-IGKJ2 STOX1 chr10 70655074 + IGKJ2 chr2 89161074 - Exonic hg19 Non-Cancer TCGA-BR-6458-11A 28 0 Out-of-frame Inter-chr q22.1 p11.2 129598 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-BR-6458-11A 24 0 Out-of-frame Inter-chr q21 q13.42 129599 ChimerSeq STARFusion TCGA RNA-Seq PGC-PGA3 PGC chr6 41705488 - PGA3 chr11 60970989 + Exonic hg19 Non-Cancer TCGA-BR-6458-11A 18 13 Out-of-frame Inter-chr p21.1 q12.2 129600 ChimerSeq STARFusion TCGA RNA-Seq PGC-PGA3 PGC chr6 41711072 - PGA3 chr11 60970987 + Exonic hg19 Non-Cancer TCGA-BR-6458-11A 4 45 Out-of-frame Inter-chr p21.1 q12.2 129601 ChimerSeq STARFusion TCGA RNA-Seq PGA3-PGC PGA3 chr11 60997445 + PGC chr6 41707626 - Exonic hg19 Non-Cancer TCGA-BR-6458-11A 3 19 Out-of-frame Inter-chr q12.2 p21.1 129602 ChimerSeq STARFusion TCGA RNA-Seq PGC-PGA3 PGC chr6 41705480 - PGA3 chr11 60970997 + Exonic hg19 Non-Cancer TCGA-BR-6458-11A 4 13 Out-of-frame Inter-chr p21.1 q12.2 129603 ChimerSeq STARFusion TCGA RNA-Seq PGA3-PGC PGA3 chr11 60974099 + PGC chr6 41711127 - Exonic hg19 Non-Cancer TCGA-BR-6458-11A 2 19 In-Frame Inter-chr q12.2 p21.1 129604 ChimerSeq STARFusion TCGA RNA-Seq APOA4-NFIC APOA4 chr11 116691433 - NFIC chr19 3465420 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 9 0 Out-of-frame Inter-chr q23.3 p13.3 Transcription factor 129605 ChimerSeq STARFusion TCGA RNA-Seq IGJ-FGF23 IGJ chr4 71521266 - FGF23 chr12 4479175 - Exonic hg19 Non-Cancer TCGA-CG-5734-11A 8 0 Out-of-frame Inter-chr p13.32 129606 ChimerSeq STARFusion TCGA RNA-Seq REV3L-RPL28 REV3L chr6 111804150 - RPL28 chr19 55897726 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 7 0 Out-of-frame Inter-chr q21 q13.42 129607 ChimerSeq STARFusion TCGA RNA-Seq BRI3BP-UBC BRI3BP chr12 125478549 + UBC chr12 125398320 - Exonic hg19 Non-Cancer TCGA-CG-5734-11A 3 0 CDS-5'UTR Intra-chr q24.31 q24.31 129608 ChimerSeq STARFusion TCGA RNA-Seq CTBP1-PCGF3 CTBP1 chr4 1242704 - PCGF3 chr4 724419 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 3 0 Out-of-frame Intra-chr p16.3 p16.3 129609 ChimerSeq STARFusion TCGA RNA-Seq HDAC2-DDX42 HDAC2 chr6 114292049 - DDX42 chr17 61851631 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 3 0 Out-of-frame Inter-chr q21 q23.3 129610 ChimerSeq STARFusion TCGA RNA-Seq HSP90AA1-PHGR1 HSP90AA1 chr14 102551210 - PHGR1 chr15 40648500 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 3 0 Out-of-frame Inter-chr q32.31 Oncogene q15.1 129611 ChimerSeq STARFusion TCGA RNA-Seq PAWR-GDI2 PAWR chr12 80083509 - GDI2 chr10 5842668 - Exonic hg19 Non-Cancer TCGA-CG-5734-11A 3 0 In-Frame Inter-chr q21.2 Tumor suppressor gene p15.1 129612 ChimerSeq STARFusion TCGA RNA-Seq RRBP1-GRK5 RRBP1 chr20 17640374 - GRK5 chr10 120967304 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 3 0 Out-of-frame Inter-chr p12.1 q26.11 129613 ChimerSeq STARFusion TCGA RNA-Seq SOS1-MGAT5 SOS1 chr2 39347477 - MGAT5 chr2 135010666 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 3 0 Out-of-frame Intra-chr p22.1 q21.2 129614 ChimerSeq STARFusion TCGA RNA-Seq TFF1-ADIRF TFF1 chr21 43782495 - ADIRF chr10 88730451 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 3 0 Out-of-frame Inter-chr q22.3 q23.2 129615 ChimerSeq STARFusion TCGA RNA-Seq ARFIP1-SEL1L3 ARFIP1 chr4 153701243 + SEL1L3 chr4 25849486 - Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 5'UTR-CDS Intra-chr q31.3 p15.2 129616 ChimerSeq STARFusion TCGA RNA-Seq ARHGEF7-SFPQ ARHGEF7 chr13 111806338 + SFPQ chr1 35643637 - Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 CDS-3'UTR Inter-chr q34 p34.3 129617 ChimerSeq STARFusion TCGA RNA-Seq ARSB-EDIL3 ARSB chr5 78181407 - EDIL3 chr5 83259179 - Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 Out-of-frame Intra-chr q14.1 q14.3 129618 ChimerSeq STARFusion TCGA RNA-Seq C19orf53-ATG16L2 C19orf53 chr19 13885521 + ATG16L2 chr11 72553662 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 CDS-3'UTR Inter-chr p13.13 q13.4 129619 ChimerSeq STARFusion TCGA RNA-Seq CASZ1-DDB1 CASZ1 chr1 10856621 - DDB1 chr11 61099163 - Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 5'UTR-CDS Inter-chr p36.22 Transcription factor q12.2 129620 ChimerSeq STARFusion TCGA RNA-Seq CCNY-GNAS CCNY chr10 35626135 + GNAS chr20 57470667 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 In-Frame Inter-chr p11.21 q13.32 Oncogene 129621 ChimerSeq STARFusion TCGA RNA-Seq CSNK1G2-PIP5K1C CSNK1G2 chr19 1941417 + PIP5K1C chr19 3648706 - Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 5'UTR-CDS Intra-chr p13.3 p13.3 129622 ChimerSeq STARFusion TCGA RNA-Seq DOCK5-FNTA DOCK5 chr8 25101273 + FNTA chr8 42919244 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 In-Frame Intra-chr p21.2 p11.21 129623 ChimerSeq STARFusion TCGA RNA-Seq EEA1-CNOT2 EEA1 chr12 93195376 - CNOT2 chr12 70732223 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 Out-of-frame Intra-chr q22 Transcription factor q15 129624 ChimerSeq STARFusion TCGA RNA-Seq ETHE1-CEACAM1 ETHE1 chr19 44030353 - CEACAM1 chr19 43013380 - Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 In-Frame Intra-chr q13.31 q13.2 Tumor suppressor gene 129625 ChimerSeq STARFusion TCGA RNA-Seq ETNK1-TMEM164 ETNK1 chr12 22778520 + TMEM164 chrX 109310575 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 In-Frame Inter-chr p12.1 q23 129626 ChimerSeq STARFusion TCGA RNA-Seq ETS2-SON ETS2 chr21 40182030 + SON chr21 34947902 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 Out-of-frame Intra-chr q22.2 Tumor suppressor gene Transcription factor q22.11 Transcription factor 129627 ChimerSeq STARFusion TCGA RNA-Seq FAM83H-SPG7 FAM83H chr8 144815861 - SPG7 chr16 89611056 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 Out-of-frame Inter-chr q24.3 129628 ChimerSeq STARFusion TCGA RNA-Seq GDA-UBE2R2 GDA chr9 74764598 + UBE2R2 chr9 33886879 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 In-Frame Intra-chr q21.13 p13.3 129629 ChimerSeq STARFusion TCGA RNA-Seq KDM6B-B2M KDM6B chr17 7743342 + B2M chr15 45007621 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 5'UTR-CDS Inter-chr p13.1 Oncogene 129630 ChimerSeq STARFusion TCGA RNA-Seq LINC00968-PENK LINC00968 chr8 57472012 - PENK chr8 57359040 - Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 Out-of-frame Intra-chr q12.1 q12.1 129631 ChimerSeq STARFusion TCGA RNA-Seq LYPD6B-DCBLD1 LYPD6B chr2 149895315 + DCBLD1 chr6 117801509 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 5'UTR-5'UTR Inter-chr q23.2 q22.1 129632 ChimerSeq STARFusion TCGA RNA-Seq MAP2K3-TMEM11 MAP2K3 chr17 21188281 + TMEM11 chr17 21102153 - Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 Out-of-frame Intra-chr p11.2 STE:STE7 p11.2 129633 ChimerSeq STARFusion TCGA RNA-Seq MYO10-LRRC28 MYO10 chr5 16794755 - LRRC28 chr15 99926235 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 Out-of-frame Inter-chr p15.1 q26.3 129634 ChimerSeq STARFusion TCGA RNA-Seq NDST2-PHRF1 NDST2 chr10 75566866 - PHRF1 chr11 587259 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 Out-of-frame Inter-chr q22.2 p15.5 129635 ChimerSeq STARFusion TCGA RNA-Seq NPTN-NEO1 NPTN chr15 73925466 - NEO1 chr15 73528628 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 Out-of-frame Intra-chr q24.1 q24.1 129636 ChimerSeq STARFusion TCGA RNA-Seq OAF-ARHGEF12 OAF chr11 120082218 + ARHGEF12 chr11 120322221 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 Out-of-frame Intra-chr q23.3 q23.3 Tumor suppressor gene 129637 ChimerSeq STARFusion TCGA RNA-Seq ONECUT2-ATP8B1 ONECUT2 chr18 55104176 + ATP8B1 chr18 55399064 - Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 CDS-5'UTR Intra-chr q21.31 Transcription factor q21.31 129638 ChimerSeq STARFusion TCGA RNA-Seq PDS5B-HERPUD2 PDS5B chr13 33160730 + HERPUD2 chr7 35712888 - Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 5'UTR-CDS Inter-chr q13.1 Tumor suppressor gene p14.2 129639 ChimerSeq STARFusion TCGA RNA-Seq PHACTR2-AIG1 PHACTR2 chr6 143858344 + AIG1 chr6 143605247 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 Out-of-frame Intra-chr q24.2 q24.2 129640 ChimerSeq STARFusion TCGA RNA-Seq PTPRG-SH3RF1 PTPRG chr3 61989171 + SH3RF1 chr4 170077830 - Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 In-Frame Inter-chr p14.2 q33 129641 ChimerSeq STARFusion TCGA RNA-Seq RALY-TOP1 RALY chr20 32581937 + TOP1 chr20 39690034 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 5'UTR-CDS Intra-chr q11.22 q12 Oncogene 129642 ChimerSeq STARFusion TCGA RNA-Seq RAP1B-RNF10 RAP1B chr12 69004832 + RNF10 chr12 120992521 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 5'UTR-CDS Intra-chr q15 q24.31 129643 ChimerSeq STARFusion TCGA RNA-Seq RNF214-AKR1A1 RNF214 chr11 117105095 + AKR1A1 chr1 46033654 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 In-Frame Inter-chr q23.3 p34.1 129644 ChimerSeq STARFusion TCGA RNA-Seq SGK3-TTC39B SGK3 chr8 67625068 + TTC39B chr9 15267946 - Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 5'UTR-CDS Inter-chr q13.1 AGC:SGK p22.3 129645 ChimerSeq STARFusion TCGA RNA-Seq SGSH-SCAMP2 SGSH chr17 78185870 - SCAMP2 chr15 75137934 - Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 Out-of-frame Inter-chr q25.3 q24.1 129646 ChimerSeq STARFusion TCGA RNA-Seq SHQ1-MAGI1 SHQ1 chr3 72842067 - MAGI1 chr3 65888483 - Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 Out-of-frame Intra-chr p13 Tumor suppressor gene Oncogene 129647 ChimerSeq STARFusion TCGA RNA-Seq SLC25A13-SHFM1 SLC25A13 chr7 95906508 - SHFM1 chr7 96324203 - Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 Out-of-frame Intra-chr q21.3 129648 ChimerSeq STARFusion TCGA RNA-Seq SLK-ZBTB7A SLK chr10 105727653 + ZBTB7A chr19 4055245 - Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 CDS-5'UTR Inter-chr q24.33 STE:STE20 p13.3 Transcription factor 129649 ChimerSeq STARFusion TCGA RNA-Seq SNRPD2-NAP1L4 SNRPD2 chr19 46195145 - NAP1L4 chr11 3000467 - Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 5'UTR-5'UTR Inter-chr q13.32 129650 ChimerSeq STARFusion TCGA RNA-Seq TATDN1-DERL1 TATDN1 chr8 125535178 - DERL1 chr8 124035019 - Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 Out-of-frame Intra-chr q24.13 q24.13 129651 ChimerSeq STARFusion TCGA RNA-Seq ZNF516-SMAD2 ZNF516 chr18 74153201 - SMAD2 chr18 45423180 - Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 CDS-5'UTR Intra-chr q23 Transcription factor q21.1 Oncogene Tumor suppressor gene 129652 ChimerSeq STARFusion TCGA RNA-Seq ZNF783-TRIM38 ZNF783 chr7 148959448 + TRIM38 chr6 25983392 + Exonic hg19 Non-Cancer TCGA-CG-5734-11A 2 0 Out-of-frame Inter-chr q36.1 Transcription factor p22.2 129653 ChimerSeq STARFusion TCGA RNA-Seq HCFC1-IGH@ HCFC1 chrX 153222118 - IGH@ chr14 106175001 - Exonic hg19 Non-Cancer TCGA-BR-6457-11A 57 0 Out-of-frame Inter-chr q28 32.33 129654 ChimerSeq STARFusion TCGA RNA-Seq HCFC1-IGHA1 HCFC1 chrX 153222118 - IGHA1 chr14 106175001 - Exonic hg19 Non-Cancer TCGA-BR-6457-11A 57 0 Out-of-frame Inter-chr q28 129655 ChimerSeq STARFusion TCGA RNA-Seq IGH@-DST IGH@ chr14 106573632 - DST chr6 56482827 - Exonic hg19 Non-Cancer TCGA-BR-6457-11A 53 0 Out-of-frame Inter-chr 32.33 p12.1 Oncogene 129656 ChimerSeq STARFusion TCGA RNA-Seq COASY-IGH@ COASY chr17 40714608 + IGH@ chr14 106209410 - Exonic hg19 Non-Cancer TCGA-BR-6457-11A 13 0 Out-of-frame Inter-chr q21.2 32.33 129657 ChimerSeq STARFusion TCGA RNA-Seq COASY-IGHG1 COASY chr17 40714608 + IGHG1 chr14 106209410 - Exonic hg19 Non-Cancer TCGA-BR-6457-11A 13 0 Out-of-frame Inter-chr q21.2 q32.33 129658 ChimerSeq STARFusion TCGA RNA-Seq FBXW8-PGA4 FBXW8 chr12 117423188 + PGA4 chr11 61017138 + Exonic hg19 Non-Cancer TCGA-BR-6457-11A 12 0 Out-of-frame Inter-chr q24.22 q12.2 129659 ChimerSeq STARFusion TCGA RNA-Seq FBXW8-PGA5 FBXW8 chr12 117423188 + PGA5 chr11 61017138 + Exonic hg19 Non-Cancer TCGA-BR-6457-11A 12 0 Out-of-frame Inter-chr q24.22 q12.2 129660 ChimerSeq STARFusion TCGA RNA-Seq NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer TCGA-BR-6457-11A 12 0 Out-of-frame Intra-chr p11.2 129661 ChimerSeq STARFusion TCGA RNA-Seq GAS6-IGH@ GAS6 chr13 114525072 - IGH@ chr14 106209410 - Exonic hg19 Non-Cancer TCGA-CG-5720-11A 40 0 Out-of-frame Inter-chr q34 Oncogene 32.33 129662 ChimerSeq STARFusion TCGA RNA-Seq GAS6-IGH@ GAS6 chr13 114525073 - IGH@ chr14 106175005 - Exonic hg19 Non-Cancer TCGA-CG-5720-11A 35 0 Out-of-frame Inter-chr q34 Oncogene 32.33 129663 ChimerSeq STARFusion TCGA RNA-Seq IGJ-FGF23 IGJ chr4 71521266 - FGF23 chr12 4479175 - Exonic hg19 Non-Cancer TCGA-CG-5720-11A 8 0 Out-of-frame Inter-chr p13.32 129664 ChimerSeq STARFusion TCGA RNA-Seq BMS1P20-IGLC7 BMS1P20 chr22 22677103 + IGLC7 chr22 23264767 + Exonic hg19 Non-Cancer TCGA-CG-5720-11A 7 0 Out-of-frame Intra-chr q11.22 129665 ChimerSeq STARFusion TCGA RNA-Seq GGT7-IGHG3 GGT7 chr20 33451181 - IGHG3 chr14 106237742 - Exonic hg19 Non-Cancer TCGA-CG-5720-11A 4 0 Out-of-frame Inter-chr q11.22 129666 ChimerSeq STARFusion TCGA RNA-Seq CD74-FBLIM1 CD74 chr5 149781266 - FBLIM1 chr1 16112461 + Exonic hg19 Non-Cancer TCGA-CG-5720-11A 3 0 Out-of-frame Inter-chr q33.1 p36.21 129667 ChimerSeq STARFusion TCGA RNA-Seq FTX-RASEF FTX chrX 73513187 - RASEF chr9 85640836 - Exonic hg19 Non-Cancer TCGA-CG-5720-11A 3 0 3'UTR-CDS Inter-chr q13.2 q21.32 129668 ChimerSeq STARFusion TCGA RNA-Seq MRPL19-EML4 MRPL19 chr2 75882428 + EML4 chr2 42483641 + Exonic hg19 Non-Cancer TCGA-CG-5720-11A 3 0 Out-of-frame Intra-chr p12 p21 Oncogene 129669 ChimerSeq STARFusion TCGA RNA-Seq B2M-ANXA2 B2M chr15 45003811 + ANXA2 chr15 60656722 - Exonic hg19 Non-Cancer TCGA-CG-5720-11A 2 0 In-Frame Intra-chr Oncogene q22.2 129670 ChimerSeq STARFusion TCGA RNA-Seq B4GALT5-HNRNPUL1 B4GALT5 chr20 48330113 - HNRNPUL1 chr19 41774128 + Exonic hg19 Non-Cancer TCGA-CG-5720-11A 2 0 Out-of-frame Inter-chr q13.13 q13.2 129671 ChimerSeq STARFusion TCGA RNA-Seq CCNJ-PCBP2 CCNJ chr10 97804219 + PCBP2 chr12 53848510 + Exonic hg19 Non-Cancer TCGA-CG-5720-11A 2 0 CDS-5'UTR Inter-chr q24.1 q13.13 129672 ChimerSeq STARFusion TCGA RNA-Seq FGD2-VAV1 FGD2 chr6 36979630 + VAV1 chr19 6826623 + Exonic hg19 Non-Cancer TCGA-CG-5720-11A 2 0 In-Frame Inter-chr p21.2 p13.3 129673 ChimerSeq STARFusion TCGA RNA-Seq MARCH6-KLF13 2019_ 3_ 6_ chr5 10354029 + KLF13 chr15 31664213 + Exonic hg19 Non-Cancer TCGA-CG-5720-11A 2 0 In-Frame Inter-chr p15.2 Transcription factor 129674 ChimerSeq STARFusion TCGA RNA-Seq MBNL1-UBA3 MBNL1 chr3 152018156 + UBA3 chr3 69120768 - Exonic hg19 Non-Cancer TCGA-CG-5720-11A 2 0 In-Frame Intra-chr q25.1 p14.1 129675 ChimerSeq STARFusion TCGA RNA-Seq NOL9-PARK7 NOL9 chr1 6610456 - PARK7 chr1 8037712 + Exonic hg19 Non-Cancer TCGA-CG-5720-11A 2 0 Out-of-frame Intra-chr p36.31 p36.23 Tumor suppressor gene 129676 ChimerSeq STARFusion TCGA RNA-Seq PCMTD1-CYSTM1 PCMTD1 chr8 52758221 - CYSTM1 chr5 139574031 + Exonic hg19 Non-Cancer TCGA-CG-5720-11A 2 0 Out-of-frame Inter-chr q11.23 q31.3 129677 ChimerSeq STARFusion TCGA RNA-Seq PCYT1A-SDHAP1 PCYT1A chr3 195975078 - SDHAP1 chr3 195686957 - Exonic hg19 Non-Cancer TCGA-CG-5720-11A 2 0 CDS-3'UTR Intra-chr q29 q29 129678 ChimerSeq STARFusion TCGA RNA-Seq SPIN1-ZCCHC11 SPIN1 chr9 91003453 + ZCCHC11 chr1 52912339 - Exonic hg19 Non-Cancer TCGA-CG-5720-11A 2 0 5'UTR-CDS Inter-chr q22.1 p32.3 129679 ChimerSeq STARFusion TCGA RNA-Seq TTC3-FKBP8 TTC3 chr21 38445773 + FKBP8 chr19 18652805 - Exonic hg19 Non-Cancer TCGA-CG-5720-11A 2 0 5'UTR-5'UTR Inter-chr q22.13 p13.11 129680 ChimerSeq STARFusion TCGA RNA-Seq ZFP90-PLD2 ZFP90 chr16 68567758 + PLD2 chr17 4725088 + Exonic hg19 Non-Cancer TCGA-CG-5720-11A 2 0 Out-of-frame Inter-chr q22.1 Transcription factor p13.2 129681 ChimerSeq STARFusion TCGA RNA-Seq ZNF506-UPF1 ZNF506 chr19 19932410 - UPF1 chr19 18956789 + Exonic hg19 Non-Cancer TCGA-CG-5720-11A 2 0 Out-of-frame Intra-chr p13.11 Transcription factor p13.11 129682 ChimerSeq STARFusion TCGA RNA-Seq ZNF620-RPL14 ZNF620 chr3 40547867 + RPL14 chr3 40502898 + Exonic hg19 Non-Cancer TCGA-CG-5720-11A 2 0 Out-of-frame Intra-chr p22.1 Transcription factor p22.1 129683 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BJ-A2N9-11A 18 36 3'UTR-3'UTR Intra-chr 129684 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BJ-A2N9-11A 5 27 Out-of-frame Intra-chr q11.22 q11.23 129685 ChimerSeq STARFusion TCGA RNA-Seq ACAT2-IGH@ ACAT2 chr6 160183157 + IGH@ chr14 106111128 - Exonic hg19 Non-Cancer TCGA-BJ-A2N9-11A 11 1 Out-of-frame Inter-chr q25.3 32.33 129686 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854180 - CBX3 chr7 26241365 + Exonic hg19 Non-Cancer TCGA-BJ-A2N9-11A 5 19 Out-of-frame Inter-chr q15.1 p15.2 129687 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854971 - CBX3 chr7 26241389 + Exonic hg19 Non-Cancer TCGA-BJ-A2N9-11A 4 19 Out-of-frame Inter-chr q15.1 p15.2 129688 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BJ-A2N9-11A 5 11 Out-of-frame Intra-chr q11.22 q11.22 129689 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BJ-A290-11A 9 38 Out-of-frame Intra-chr q11.22 q11.23 129690 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BJ-A290-11A 9 14 Out-of-frame Intra-chr q11.22 q11.22 129691 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BJ-A290-11A 4 17 3'UTR-3'UTR Intra-chr 129692 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EM-A1CT-11A 3 41 Out-of-frame Intra-chr q11.22 q11.23 129693 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EM-A1CT-11A 3 24 Out-of-frame Intra-chr q11.22 q11.22 129694 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-EM-A1CT-11A 5 4 Out-of-frame Inter-chr q13.13 p12.3 129695 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-EM-A1CT-11A 5 4 Out-of-frame Inter-chr q13.13 p12.3 129696 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106209409 - Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 129 4 Out-of-frame Inter-chr q11.21 32.33 129697 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGHG1 C22orf39 chr22 19344505 - IGHG1 chr14 106209409 - Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 129 4 Out-of-frame Inter-chr q11.21 q32.33 129698 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106209409 - Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 129 2 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129699 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGHG1 HIRA chr22 19344505 - IGHG1 chr14 106209409 - Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 129 2 Out-of-frame Inter-chr q11.21 Tumor suppressor gene q32.33 129700 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106111128 - Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 104 4 Out-of-frame Inter-chr q11.21 32.33 129701 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106111128 - Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 104 2 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129702 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106136183 - Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 103 4 Out-of-frame Inter-chr q11.21 32.33 129703 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106136183 - Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 103 2 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129704 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106237744 - Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 98 4 Out-of-frame Inter-chr q11.21 32.33 129705 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106237744 - Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 98 2 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129706 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGHG1 C22orf39 chr22 19344505 - IGHG1 chr14 106237744 - Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 91 4 Out-of-frame Inter-chr q11.21 q32.33 129707 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGHG1 HIRA chr22 19344505 - IGHG1 chr14 106237744 - Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 91 2 Out-of-frame Inter-chr q11.21 Tumor suppressor gene q32.33 129708 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGH@ STK25 chr2 242434915 - IGH@ chr14 106209410 - Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 68 1 Out-of-frame Inter-chr q37.3 32.33 129709 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106092404 - Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 65 4 Out-of-frame Inter-chr q11.21 32.33 129710 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106092404 - Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 65 2 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129711 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106175003 - Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 22 4 Out-of-frame Inter-chr q11.21 32.33 129712 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106175003 - Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 22 2 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129713 ChimerSeq STARFusion TCGA RNA-Seq DPP9-IGH@ DPP9 chr19 4682817 - IGH@ chr14 106111129 - Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 17 1 Out-of-frame Inter-chr p13.3 32.33 129714 ChimerSeq STARFusion TCGA RNA-Seq DPP9-IGHG2 DPP9 chr19 4682817 - IGHG2 chr14 106111129 - Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 17 1 Out-of-frame Inter-chr p13.3 129715 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106054733 - Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 15 4 Out-of-frame Inter-chr q11.21 32.33 129716 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106054733 - Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 15 2 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129717 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 5 33 Out-of-frame Intra-chr q11.22 q11.23 129718 ChimerSeq STARFusion TCGA RNA-Seq DPP9-IGH@ DPP9 chr19 4682817 - IGH@ chr14 106209410 - Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 10 1 Out-of-frame Inter-chr p13.3 32.33 129719 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 5 19 Out-of-frame Intra-chr q11.22 q11.22 129720 ChimerSeq STARFusion TCGA RNA-Seq DPP9-IGH@ DPP9 chr19 4682817 - IGH@ chr14 106237745 - Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 9 1 Out-of-frame Inter-chr p13.3 32.33 129721 ChimerSeq STARFusion TCGA RNA-Seq DPP9-IGH@ DPP9 chr19 4682817 - IGH@ chr14 106136184 - Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 8 1 Out-of-frame Inter-chr p13.3 32.33 129722 ChimerSeq STARFusion TCGA RNA-Seq DPP9-IGH@ DPP9 chr19 4682817 - IGH@ chr14 106092405 - Exonic hg19 Non-Cancer TCGA-BJ-A28R-11A 7 1 Out-of-frame Inter-chr p13.3 32.33 129723 ChimerSeq STARFusion TCGA RNA-Seq NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer TCGA-ET-A3DW-11A 13 3 Out-of-frame Intra-chr p11.2 129724 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-ET-A3DW-11A 4 24 Out-of-frame Intra-chr q11.22 q11.23 129725 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-ET-A3DW-11A 4 9 Out-of-frame Intra-chr q11.22 q11.22 129726 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3T7-11A 8 25 Out-of-frame Intra-chr q11.22 q11.23 129727 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3T7-11A 8 15 Out-of-frame Intra-chr q11.22 q11.22 129728 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44648235 - Exonic hg19 Non-Cancer TCGA-EL-A3T7-11A 4 21 CDS-5'UTR Intra-chr q21.31 129729 ChimerSeq STARFusion TCGA RNA-Seq RAP1GAP-TG RAP1GAP chr1 21943812 - TG chr8 134030021 + Exonic hg19 Non-Cancer TCGA-EL-A3T7-11A 3 15 Out-of-frame Inter-chr p36.12 Tumor suppressor gene q24.22 129730 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3TA-11A 10 38 Out-of-frame Intra-chr q11.22 q11.23 129731 ChimerSeq STARFusion TCGA RNA-Seq CTSB-TG CTSB chr8 11705575 - TG chr8 134042125 + Exonic hg19 Non-Cancer TCGA-EL-A3TA-11A 3 55 In-Frame Intra-chr p23.1 q24.22 129732 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3TA-11A 10 24 Out-of-frame Intra-chr q11.22 q11.22 129733 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854971 - CBX3 chr7 26241389 + Exonic hg19 Non-Cancer TCGA-EL-A3TA-11A 4 14 Out-of-frame Inter-chr q15.1 p15.2 129734 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677322 + IGLL5 chr22 23235961 + Exonic hg19 Non-Cancer TCGA-GE-A2C6-11A 3 302 Out-of-frame Intra-chr q11.22 129735 ChimerSeq STARFusion TCGA RNA-Seq CES4A-TG CES4A chr16 67034897 + TG chr8 134042065 + Exonic hg19 Non-Cancer TCGA-GE-A2C6-11A 21 1 Out-of-frame Inter-chr q22.1 q24.22 129736 ChimerSeq STARFusion TCGA RNA-Seq TG-COL6A2 TG chr8 134034395 + COL6A2 chr21 47532728 + Exonic hg19 Non-Cancer TCGA-GE-A2C6-11A 9 1 Out-of-frame Inter-chr q24.22 q22.3 129737 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-GE-A2C6-11A 2 4 CDS-5'UTR Intra-chr q21.31 129738 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-GE-A2C6-11A 2 1 3'UTR-3'UTR Intra-chr 129739 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3T0-11A 5 40 Out-of-frame Intra-chr q11.22 q11.23 129740 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3T0-11A 5 12 Out-of-frame Intra-chr q11.22 q11.22 129741 ChimerSeq STARFusion TCGA RNA-Seq TMEM57-RHCE TMEM57 chr1 25775425 + RHCE chr1 25712335 - Exonic hg19 Non-Cancer TCGA-EL-A3T0-11A 2 16 Out-of-frame Intra-chr p36.11 p36.11 129742 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3T2-11A 7 53 Out-of-frame Intra-chr q11.22 q11.23 129743 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-EL-A3T2-11A 9 44 3'UTR-3'UTR Intra-chr 129744 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3T2-11A 7 26 Out-of-frame Intra-chr q11.22 q11.22 129745 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-EL-A3T2-11A 3 19 5'UTR-CDS Intra-chr q13.1 q13.1 129746 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3ZH-11A 9 51 Out-of-frame Intra-chr q11.22 q11.23 129747 ChimerSeq STARFusion TCGA RNA-Seq MIPEPP3-ABHD12 MIPEPP3 chr13 21872464 + ABHD12 chr20 25371382 - Exonic hg19 Non-Cancer TCGA-EL-A3ZH-11A 21 0 Out-of-frame Inter-chr q12.11 p11.21 129748 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854971 - CBX3 chr7 26241389 + Exonic hg19 Non-Cancer TCGA-EL-A3ZH-11A 5 48 Out-of-frame Inter-chr q15.1 p15.2 129749 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3ZH-11A 9 26 Out-of-frame Intra-chr q11.22 q11.22 129750 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854180 - CBX3 chr7 26241365 + Exonic hg19 Non-Cancer TCGA-EL-A3ZH-11A 3 47 Out-of-frame Inter-chr q15.1 p15.2 129751 ChimerSeq STARFusion TCGA RNA-Seq TG-GNAS TG chr8 134042268 + GNAS chr20 57470667 + Exonic hg19 Non-Cancer TCGA-EL-A3ZH-11A 2 21 Out-of-frame Inter-chr q24.22 q13.32 Oncogene 129752 ChimerSeq STARFusion TCGA RNA-Seq LOC729852-GLCCI1 LOC729852 chr7 7841374 + GLCCI1 chr7 8043538 + Exonic hg19 Non-Cancer TCGA-ET-A2N5-11B 3 5 5'UTR-CDS Intra-chr p21.3 129753 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-ET-A2N5-11B 2 5 CDS-3'UTR Intra-chr q11.22 q22.2 129754 ChimerSeq STARFusion TCGA RNA-Seq RDH13-MPHOSPH8 RDH13 chr19 55575664 - MPHOSPH8 chr13 20237180 + Exonic hg19 Non-Cancer TCGA-EL-A3T3-11A 2 0 Out-of-frame Inter-chr q12.11 129755 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-ET-A3DP-11A 11 31 Out-of-frame Intra-chr q11.22 q11.23 129756 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-ET-A3DP-11A 11 25 Out-of-frame Intra-chr q11.22 q11.22 129757 ChimerSeq STARFusion TCGA RNA-Seq NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer TCGA-ET-A3DP-11A 11 2 Out-of-frame Intra-chr p11.2 129758 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-ET-A3DP-11A 7 7 Out-of-frame Inter-chr q13.13 p12.3 129759 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-ET-A3DP-11A 3 7 Out-of-frame Inter-chr q13.13 p12.3 129760 ChimerSeq STARFusion TCGA RNA-Seq GNG10-UGCG GNG10 chr9 114429226 + UGCG chr9 114676885 + Exonic hg19 Non-Cancer TCGA-KS-A41L-11A 2 3 3'UTR-CDS Intra-chr q31.3 q31.3 129761 ChimerSeq STARFusion TCGA RNA-Seq NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer TCGA-EM-A3ST-11A 16 6 Out-of-frame Intra-chr p11.2 129762 ChimerSeq STARFusion TCGA RNA-Seq CELF1-DAPL1 CELF1 chr11 47585903 - DAPL1 chr2 159672217 + Exonic hg19 Non-Cancer TCGA-EM-A3ST-11A 7 0 Out-of-frame Inter-chr p11.2 q24.1 129763 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGH@ STK25 chr2 242434915 - IGH@ chr14 106136184 - Exonic hg19 Non-Cancer TCGA-EM-A3ST-11A 6 1 Out-of-frame Inter-chr q37.3 32.33 129764 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGHG1 STK25 chr2 242434915 - IGHG1 chr14 106209410 - Exonic hg19 Non-Cancer TCGA-EM-A3ST-11A 6 1 Out-of-frame Inter-chr q37.3 q32.33 129765 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106209409 - Exonic hg19 Non-Cancer TCGA-EL-A3T6-11A 90 2 Out-of-frame Inter-chr q11.21 32.33 129766 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGHG1 C22orf39 chr22 19344505 - IGHG1 chr14 106209409 - Exonic hg19 Non-Cancer TCGA-EL-A3T6-11A 90 2 Out-of-frame Inter-chr q11.21 q32.33 129767 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106209409 - Exonic hg19 Non-Cancer TCGA-EL-A3T6-11A 90 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129768 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGHG1 HIRA chr22 19344505 - IGHG1 chr14 106209409 - Exonic hg19 Non-Cancer TCGA-EL-A3T6-11A 90 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene q32.33 129769 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106237744 - Exonic hg19 Non-Cancer TCGA-EL-A3T6-11A 72 2 Out-of-frame Inter-chr q11.21 32.33 129770 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106237744 - Exonic hg19 Non-Cancer TCGA-EL-A3T6-11A 72 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129771 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGHG1 C22orf39 chr22 19344505 - IGHG1 chr14 106237744 - Exonic hg19 Non-Cancer TCGA-EL-A3T6-11A 71 2 Out-of-frame Inter-chr q11.21 q32.33 129772 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGHG1 HIRA chr22 19344505 - IGHG1 chr14 106237744 - Exonic hg19 Non-Cancer TCGA-EL-A3T6-11A 71 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene q32.33 129773 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106136183 - Exonic hg19 Non-Cancer TCGA-EL-A3T6-11A 65 2 Out-of-frame Inter-chr q11.21 32.33 129774 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106136183 - Exonic hg19 Non-Cancer TCGA-EL-A3T6-11A 65 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129775 ChimerSeq STARFusion TCGA RNA-Seq MIPEPP3-ABHD12 MIPEPP3 chr13 21872464 + ABHD12 chr20 25371382 - Exonic hg19 Non-Cancer TCGA-EL-A3T6-11A 52 0 Out-of-frame Inter-chr q12.11 p11.21 129776 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106092404 - Exonic hg19 Non-Cancer TCGA-EL-A3T6-11A 49 2 Out-of-frame Inter-chr q11.21 32.33 129777 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106092404 - Exonic hg19 Non-Cancer TCGA-EL-A3T6-11A 49 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129778 ChimerSeq STARFusion TCGA RNA-Seq DHRSX-IGHG1 DHRSX chrY 2134825 - IGHG1 chr14 106237740 - Exonic hg19 Non-Cancer TCGA-EL-A3T6-11A 32 0 Out-of-frame Inter-chr p22.33 q32.33 129779 ChimerSeq STARFusion TCGA RNA-Seq DHRSX-IGH@ DHRSX chrX 2184825 - IGH@ chr14 106237740 - Exonic hg19 Non-Cancer TCGA-EL-A3T6-11A 28 0 Out-of-frame Inter-chr p22.33 32.33 129780 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-EL-A3T6-11A 15 34 3'UTR-3'UTR Intra-chr 129781 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106111128 - Exonic hg19 Non-Cancer TCGA-EL-A3T6-11A 12 1 Out-of-frame Inter-chr q11.21 32.33 129782 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106175003 - Exonic hg19 Non-Cancer TCGA-EL-A3T6-11A 10 2 Out-of-frame Inter-chr q11.21 32.33 129783 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106175003 - Exonic hg19 Non-Cancer TCGA-EL-A3T6-11A 10 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129784 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3T6-11A 2 18 Out-of-frame Intra-chr q11.22 q11.22 129785 ChimerSeq STARFusion TCGA RNA-Seq NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer TCGA-EL-A3T6-11A 5 5 Out-of-frame Intra-chr p11.2 129786 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005213 - POLA1 chrX 24721386 + Exonic hg19 Non-Cancer TCGA-EL-A3ZG-11A 8 0 Out-of-frame Inter-chr q11.2 p22.11 129787 ChimerSeq STARFusion TCGA RNA-Seq NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer TCGA-EL-A3ZG-11A 6 4 Out-of-frame Intra-chr p11.2 129788 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-EL-A3ZG-11A 6 1 Out-of-frame Inter-chr q13.13 p12.3 129789 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGH@ STK25 chr2 242434915 - IGH@ chr14 106175004 - Exonic hg19 Non-Cancer TCGA-EL-A3N3-11A 54 1 Out-of-frame Inter-chr q37.3 32.33 129790 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGH@ STK25 chr2 242434915 - IGH@ chr14 106209410 - Exonic hg19 Non-Cancer TCGA-EL-A3N3-11A 41 1 Out-of-frame Inter-chr q37.3 32.33 129791 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGHG1 STK25 chr2 242434915 - IGHG1 chr14 106209410 - Exonic hg19 Non-Cancer TCGA-EL-A3N3-11A 41 1 Out-of-frame Inter-chr q37.3 q32.33 129792 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGH@ STK25 chr2 242434915 - IGH@ chr14 106136184 - Exonic hg19 Non-Cancer TCGA-EL-A3N3-11A 33 1 Out-of-frame Inter-chr q37.3 32.33 129793 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGH@ STK25 chr2 242434915 - IGH@ chr14 106237745 - Exonic hg19 Non-Cancer TCGA-EL-A3N3-11A 32 1 Out-of-frame Inter-chr q37.3 32.33 129794 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGHG1 STK25 chr2 242434915 - IGHG1 chr14 106237745 - Exonic hg19 Non-Cancer TCGA-EL-A3N3-11A 29 1 Out-of-frame Inter-chr q37.3 q32.33 129795 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3N3-11A 11 47 Out-of-frame Intra-chr q11.22 q11.23 129796 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGH@ STK25 chr2 242434915 - IGH@ chr14 106092405 - Exonic hg19 Non-Cancer TCGA-EL-A3N3-11A 22 1 Out-of-frame Inter-chr q37.3 32.33 129797 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3N3-11A 11 18 Out-of-frame Intra-chr q11.22 q11.22 129798 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGH@ STK25 chr2 242434915 - IGH@ chr14 106054734 - Exonic hg19 Non-Cancer TCGA-EL-A3N3-11A 15 1 Out-of-frame Inter-chr q37.3 32.33 129799 ChimerSeq STARFusion TCGA RNA-Seq TG-CD74 TG chr8 133900778 + CD74 chr5 149784332 - Exonic hg19 Non-Cancer TCGA-EL-A3N3-11A 3 16 Out-of-frame Inter-chr q24.22 q33.1 129800 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854180 - CBX3 chr7 26241365 + Exonic hg19 Non-Cancer TCGA-EL-A3N3-11A 3 14 Out-of-frame Inter-chr q15.1 p15.2 129801 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854971 - CBX3 chr7 26241389 + Exonic hg19 Non-Cancer TCGA-EL-A3N3-11A 3 13 Out-of-frame Inter-chr q15.1 p15.2 129802 ChimerSeq STARFusion TCGA RNA-Seq NR4A1-IGH@ NR4A1 chr12 52445236 + IGH@ chr14 106330461 - Exonic hg19 Non-Cancer TCGA-EL-A3N3-11A 3 7 Out-of-frame Inter-chr q13.13 Tumor suppressor gene Transcription factor 32.33 129803 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3ZQ-11A 10 32 Out-of-frame Intra-chr q11.22 q11.23 129804 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854971 - CBX3 chr7 26241383 + Exonic hg19 Non-Cancer TCGA-EL-A3ZQ-11A 3 53 Out-of-frame Inter-chr q15.1 p15.2 129805 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-EL-A3ZQ-11A 8 33 3'UTR-3'UTR Intra-chr 129806 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854180 - CBX3 chr7 26241365 + Exonic hg19 Non-Cancer TCGA-EL-A3ZQ-11A 3 50 Out-of-frame Inter-chr q15.1 p15.2 129807 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3ZQ-11A 10 14 Out-of-frame Intra-chr q11.22 q11.22 129808 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BJ-A2N8-11A 5 35 Out-of-frame Intra-chr q11.22 q11.23 129809 ChimerSeq STARFusion TCGA RNA-Seq RAF1-AGGF1 RAF1 chr3 12645635 - AGGF1 chr5 76342172 + Exonic hg19 Non-Cancer TCGA-BJ-A2N8-11A 5 17 Out-of-frame Inter-chr p25.2 TKL:RAF Oncogene q13.3 129810 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BJ-A2N8-11A 5 17 Out-of-frame Intra-chr q11.22 q11.22 129811 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BJ-A2N8-11A 7 6 Out-of-frame Inter-chr q13.13 p12.3 129812 ChimerSeq STARFusion TCGA RNA-Seq EGR1-TG EGR1 chr5 137803113 + TG chr8 134145769 + Exonic hg19 Non-Cancer TCGA-EM-A1YC-11A 3 6 Out-of-frame Inter-chr q31.2 Tumor suppressor gene Transcription factor q24.22 129813 ChimerSeq STARFusion TCGA RNA-Seq DUSP1-ZYG11B DUSP1 chr5 172198053 - ZYG11B chr1 53237429 + Exonic hg19 Non-Cancer TCGA-EL-A3N2-11A 12 1 Out-of-frame Inter-chr q35.1 Tumor suppressor gene p32.3 129814 ChimerSeq STARFusion TCGA RNA-Seq EEF1DP3-FRY EEF1DP3 chr13 32520318 + FRY chr13 32652971 + Exonic hg19 Non-Cancer TCGA-EL-A3N2-11A 3 23 5'UTR-CDS Intra-chr q13.1 q13.1 129815 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-EL-A3N2-11A 7 4 Out-of-frame Inter-chr q13.13 p12.3 129816 ChimerSeq STARFusion TCGA RNA-Seq RAP1GAP-TG RAP1GAP chr1 21943812 - TG chr8 134030021 + Exonic hg19 Non-Cancer TCGA-EL-A3N2-11A 4 12 Out-of-frame Inter-chr p36.12 Tumor suppressor gene q24.22 129817 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3N2-11A 2 8 Out-of-frame Intra-chr q11.22 q11.22 129818 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-H2-A3RI-11A 3 29 Out-of-frame Intra-chr q11.22 q11.23 129819 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-H2-A3RI-11A 3 13 Out-of-frame Intra-chr q11.22 q11.22 129820 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 Non-Cancer TCGA-BJ-A3PR-11A 8 303 Out-of-frame Intra-chr q11.22 129821 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-BJ-A3PR-11A 3 0 Out-of-frame Inter-chr q11.2 p22.11 129822 ChimerSeq STARFusion TCGA RNA-Seq MIPEPP3-ABHD12 MIPEPP3 chr13 21872464 + ABHD12 chr20 25371382 - Exonic hg19 Non-Cancer TCGA-EL-A3ZR-11A 46 0 Out-of-frame Inter-chr q12.11 p11.21 129823 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3ZR-11A 8 28 Out-of-frame Intra-chr q11.22 q11.23 129824 ChimerSeq STARFusion TCGA RNA-Seq CYTH3-KDELR2 CYTH3 chr7 6312105 - KDELR2 chr7 6513915 - Exonic hg19 Non-Cancer TCGA-EL-A3ZR-11A 6 29 In-Frame Intra-chr p22.1 p22.1 129825 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854180 - CBX3 chr7 26241365 + Exonic hg19 Non-Cancer TCGA-EL-A3ZR-11A 4 30 Out-of-frame Inter-chr q15.1 p15.2 129826 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44648235 - Exonic hg19 Non-Cancer TCGA-EL-A3ZR-11A 5 26 CDS-5'UTR Intra-chr q21.31 129827 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3ZR-11A 8 13 Out-of-frame Intra-chr q11.22 q11.22 129828 ChimerSeq STARFusion TCGA RNA-Seq LINC00623-SEC22B LINC00623 chr1 144340526 - SEC22B chr1 145042449 + Exonic hg19 Non-Cancer TCGA-EL-A3ZR-11A 4 6 Out-of-frame Intra-chr p11.2 p12 129829 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677322 + IGLL5 chr22 23235961 + Exonic hg19 Non-Cancer TCGA-EL-A3ZS-11A 52 596 Out-of-frame Intra-chr q11.22 129830 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3MW-11A 3 46 Out-of-frame Intra-chr q11.22 q11.23 129831 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3MW-11A 3 32 Out-of-frame Intra-chr q11.22 q11.22 129832 ChimerSeq STARFusion TCGA RNA-Seq FAM91A2-LOC388692 FAM91A2 chr1 149672595 + LOC388692 chr1 149287049 + Exonic hg19 Non-Cancer TCGA-BJ-A3PU-11A 3 35 Out-of-frame Intra-chr 129833 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BJ-A3PU-11A 6 1 CDS-5'UTR Intra-chr q21.31 129834 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BJ-A3PU-11A 6 1 3'UTR-3'UTR Intra-chr 129835 ChimerSeq STARFusion TCGA RNA-Seq UBA52-UBC UBA52 chr19 18685759 + UBC chr12 125398137 - Exonic hg19 Non-Cancer TCGA-BJ-A3PU-11A 4 1 Out-of-frame Inter-chr p13.11 q24.31 129836 ChimerSeq STARFusion TCGA RNA-Seq LOC729852-GLCCI1 LOC729852 chr7 7841374 + GLCCI1 chr7 8043538 + Exonic hg19 Non-Cancer TCGA-BJ-A3PU-11A 2 8 5'UTR-CDS Intra-chr p21.3 129837 ChimerSeq STARFusion TCGA RNA-Seq UBA52-UBC UBA52 chr19 18685753 + UBC chr12 125398143 - Exonic hg19 Non-Cancer TCGA-BJ-A3PU-11A 3 1 Out-of-frame Inter-chr p13.11 q24.31 129838 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-BJ-A3PU-11A 2 3 CDS-3'UTR Intra-chr q11.22 q22.2 129839 ChimerSeq STARFusion TCGA RNA-Seq LOC729852-GLCCI1 LOC729852 chr7 7841374 + GLCCI1 chr7 8043538 + Exonic hg19 Non-Cancer TCGA-EM-A1CU-11A 3 6 5'UTR-CDS Intra-chr p21.3 129840 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005213 - POLA1 chrX 24721386 + Exonic hg19 Non-Cancer TCGA-EM-A1CU-11A 3 0 Out-of-frame Inter-chr q11.2 p22.11 129841 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 Non-Cancer TCGA-KS-A41I-11A 53 2413 Out-of-frame Intra-chr q11.22 129842 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-KS-A41I-11A 3 4 Out-of-frame Inter-chr q13.13 p12.3 129843 ChimerSeq STARFusion TCGA RNA-Seq LOC729852-GLCCI1 LOC729852 chr7 7841374 + GLCCI1 chr7 8043538 + Exonic hg19 Non-Cancer TCGA-DO-A1JZ-11A 3 3 5'UTR-CDS Intra-chr p21.3 129844 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-DO-A1JZ-11A 2 6 CDS-3'UTR Intra-chr q11.22 q22.2 129845 ChimerSeq STARFusion TCGA RNA-Seq SDC2-CPQ SDC2 chr8 97506559 + CPQ chr8 97978163 + Exonic hg19 Non-Cancer TCGA-DO-A1JZ-11A 2 2 In-Frame Intra-chr q22.1 q22.1 129846 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BJ-A2N7-11A 14 70 Out-of-frame Intra-chr q11.22 q11.23 129847 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BJ-A2N7-11A 14 32 Out-of-frame Intra-chr q11.22 q11.22 129848 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854971 - CBX3 chr7 26241389 + Exonic hg19 Non-Cancer TCGA-BJ-A2N7-11A 3 19 Out-of-frame Inter-chr q15.1 p15.2 129849 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-BJ-A2N7-11A 5 10 Out-of-frame Inter-chr q13.13 p12.3 129850 ChimerSeq STARFusion TCGA RNA-Seq RAF1-AGGF1 RAF1 chr3 12645635 - AGGF1 chr5 76342172 + Exonic hg19 Non-Cancer TCGA-BJ-A2N7-11A 3 15 Out-of-frame Inter-chr p25.2 TKL:RAF Oncogene q13.3 129851 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-BJ-A2N7-11A 3 9 Out-of-frame Inter-chr q13.13 p12.3 129852 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677323 + IGLL5 chr22 23235962 + Exonic hg19 Non-Cancer TCGA-E8-A2JQ-11A 41 1106 Out-of-frame Intra-chr q11.22 129853 ChimerSeq STARFusion TCGA RNA-Seq MECP2-DNASE1L1 MECP2 chrX 153357642 - DNASE1L1 chrX 153631963 - Exonic hg19 Non-Cancer TCGA-E8-A2JQ-11A 12 195 In-Frame Intra-chr q28 Transcription factor q28 129854 ChimerSeq STARFusion TCGA RNA-Seq MECP2-DNASE1L1 MECP2 chrX 153363061 - DNASE1L1 chrX 153631963 - Exonic hg19 Non-Cancer TCGA-E8-A2JQ-11A 7 195 In-Frame Intra-chr q28 Transcription factor q28 129855 ChimerSeq STARFusion TCGA RNA-Seq TG-COL6A2 TG chr8 134034395 + COL6A2 chr21 47532728 + Exonic hg19 Non-Cancer TCGA-E8-A2JQ-11A 18 6 Out-of-frame Inter-chr q24.22 q22.3 129856 ChimerSeq STARFusion TCGA RNA-Seq PRKCH-FLJ22447 PRKCH chr14 61997313 + FLJ22447 chr14 62117680 + Exonic hg19 Non-Cancer TCGA-E8-A2JQ-11A 2 1 CDS-5'UTR Intra-chr q23.1 q23.1 129857 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EM-A1CS-11A 3 41 Out-of-frame Intra-chr q11.22 q11.23 129858 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EM-A1CS-11A 3 21 Out-of-frame Intra-chr q11.22 q11.22 129859 ChimerSeq STARFusion TCGA RNA-Seq MIPEPP3-ABHD12 MIPEPP3 chr13 21872464 + ABHD12 chr20 25371382 - Exonic hg19 Non-Cancer TCGA-KS-A41J-11A 55 0 Out-of-frame Inter-chr q12.11 p11.21 129860 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106209409 - Exonic hg19 Non-Cancer TCGA-KS-A41J-11A 31 1 Out-of-frame Inter-chr q11.21 32.33 129861 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGHG1 C22orf39 chr22 19344505 - IGHG1 chr14 106209409 - Exonic hg19 Non-Cancer TCGA-KS-A41J-11A 31 1 Out-of-frame Inter-chr q11.21 q32.33 129862 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106209409 - Exonic hg19 Non-Cancer TCGA-KS-A41J-11A 31 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129863 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGHG1 HIRA chr22 19344505 - IGHG1 chr14 106209409 - Exonic hg19 Non-Cancer TCGA-KS-A41J-11A 31 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene q32.33 129864 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106237744 - Exonic hg19 Non-Cancer TCGA-KS-A41J-11A 26 1 Out-of-frame Inter-chr q11.21 32.33 129865 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106237744 - Exonic hg19 Non-Cancer TCGA-KS-A41J-11A 26 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129866 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106175003 - Exonic hg19 Non-Cancer TCGA-KS-A41J-11A 25 1 Out-of-frame Inter-chr q11.21 32.33 129867 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106175003 - Exonic hg19 Non-Cancer TCGA-KS-A41J-11A 25 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129868 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGHG1 C22orf39 chr22 19344505 - IGHG1 chr14 106237744 - Exonic hg19 Non-Cancer TCGA-KS-A41J-11A 24 1 Out-of-frame Inter-chr q11.21 q32.33 129869 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGHG1 HIRA chr22 19344505 - IGHG1 chr14 106237744 - Exonic hg19 Non-Cancer TCGA-KS-A41J-11A 24 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene q32.33 129870 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106136183 - Exonic hg19 Non-Cancer TCGA-KS-A41J-11A 21 1 Out-of-frame Inter-chr q11.21 32.33 129871 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106136183 - Exonic hg19 Non-Cancer TCGA-KS-A41J-11A 21 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129872 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106092404 - Exonic hg19 Non-Cancer TCGA-KS-A41J-11A 18 1 Out-of-frame Inter-chr q11.21 32.33 129873 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106092404 - Exonic hg19 Non-Cancer TCGA-KS-A41J-11A 18 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129874 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-KS-A41J-11A 7 37 3'UTR-3'UTR Intra-chr 129875 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106054733 - Exonic hg19 Non-Cancer TCGA-KS-A41J-11A 13 1 Out-of-frame Inter-chr q11.21 32.33 129876 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106054733 - Exonic hg19 Non-Cancer TCGA-KS-A41J-11A 13 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129877 ChimerSeq STARFusion TCGA RNA-Seq NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer TCGA-KS-A41J-11A 12 3 Out-of-frame Intra-chr p11.2 129878 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-KS-A41J-11A 3 26 Out-of-frame Intra-chr q11.22 q11.23 129879 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-KS-A41J-11A 3 15 Out-of-frame Intra-chr q11.22 q11.22 129880 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106209409 - Exonic hg19 Non-Cancer TCGA-EL-A3ZP-11A 49 1 Out-of-frame Inter-chr q11.21 32.33 129881 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106209409 - Exonic hg19 Non-Cancer TCGA-EL-A3ZP-11A 49 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129882 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106237744 - Exonic hg19 Non-Cancer TCGA-EL-A3ZP-11A 43 1 Out-of-frame Inter-chr q11.21 32.33 129883 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106237744 - Exonic hg19 Non-Cancer TCGA-EL-A3ZP-11A 43 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129884 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106111128 - Exonic hg19 Non-Cancer TCGA-EL-A3ZP-11A 28 1 Out-of-frame Inter-chr q11.21 32.33 129885 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106111128 - Exonic hg19 Non-Cancer TCGA-EL-A3ZP-11A 28 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129886 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106136183 - Exonic hg19 Non-Cancer TCGA-EL-A3ZP-11A 27 1 Out-of-frame Inter-chr q11.21 32.33 129887 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106136183 - Exonic hg19 Non-Cancer TCGA-EL-A3ZP-11A 27 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129888 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106092404 - Exonic hg19 Non-Cancer TCGA-EL-A3ZP-11A 20 1 Out-of-frame Inter-chr q11.21 32.33 129889 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106092404 - Exonic hg19 Non-Cancer TCGA-EL-A3ZP-11A 20 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129890 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106175003 - Exonic hg19 Non-Cancer TCGA-EL-A3ZP-11A 18 1 Out-of-frame Inter-chr q11.21 32.33 129891 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGHA1 C22orf39 chr22 19344505 - IGHA1 chr14 106175003 - Exonic hg19 Non-Cancer TCGA-EL-A3ZP-11A 18 1 Out-of-frame Inter-chr q11.21 129892 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106175003 - Exonic hg19 Non-Cancer TCGA-EL-A3ZP-11A 18 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129893 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGHA1 HIRA chr22 19344505 - IGHA1 chr14 106175003 - Exonic hg19 Non-Cancer TCGA-EL-A3ZP-11A 18 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 129894 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3ZP-11A 8 33 Out-of-frame Intra-chr q11.22 q11.23 129895 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3ZP-11A 8 18 Out-of-frame Intra-chr q11.22 q11.22 129896 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854180 - CBX3 chr7 26241365 + Exonic hg19 Non-Cancer TCGA-EL-A3ZP-11A 3 22 Out-of-frame Inter-chr q15.1 p15.2 129897 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106054733 - Exonic hg19 Non-Cancer TCGA-EL-A3ZP-11A 8 1 Out-of-frame Inter-chr q11.21 32.33 129898 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106054733 - Exonic hg19 Non-Cancer TCGA-EL-A3ZP-11A 8 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129899 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873452 + CDS2 chr20 5177877 + Exonic hg19 Non-Cancer TCGA-EL-A3ZP-11A 5 3 Out-of-frame Inter-chr q13.13 p12.3 129900 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-EL-A3ZP-11A 5 3 Out-of-frame Inter-chr q13.13 p12.3 129901 ChimerSeq STARFusion TCGA RNA-Seq U3-KCTD1 U3 chr18 24283356 - KCTD1 chr18 24081214 - Exonic hg19 Non-Cancer TCGA-EL-A3ZP-11A 2 7 Out-of-frame Intra-chr q11.2 129902 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3H2-11A 4 33 Out-of-frame Intra-chr q11.22 q11.23 129903 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3H2-11A 4 19 Out-of-frame Intra-chr q11.22 q11.22 129904 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677324 + IGLL5 chr22 23235966 + Exonic hg19 Non-Cancer TCGA-EL-A3ZO-11A 3 165 5'UTR-CDS Intra-chr q11.22 129905 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-EL-A3ZO-11A 2 8 CDS-3'UTR Intra-chr q11.22 q22.2 129906 ChimerSeq STARFusion TCGA RNA-Seq MIPEPP3-ABHD12 MIPEPP3 chr13 21872464 + ABHD12 chr20 25371382 - Exonic hg19 Non-Cancer TCGA-EL-A3ZM-11A 23 0 Out-of-frame Inter-chr q12.11 p11.21 129907 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3ZM-11A 5 21 Out-of-frame Intra-chr q11.22 q11.23 129908 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854971 - CBX3 chr7 26241389 + Exonic hg19 Non-Cancer TCGA-EL-A3ZM-11A 4 23 Out-of-frame Inter-chr q15.1 p15.2 129909 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3ZM-11A 5 11 Out-of-frame Intra-chr q11.22 q11.22 129910 ChimerSeq STARFusion TCGA RNA-Seq LOC96610-IGLL5 LOC96610 chr22 22677322 + IGLL5 chr22 23235961 + Exonic hg19 Non-Cancer TCGA-H2-A2K9-11A 4 149 Out-of-frame Intra-chr q11.22 129911 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44430296 - Exonic hg19 Non-Cancer TCGA-H2-A2K9-11A 3 3 CDS-5'UTR Intra-chr q21.31 129912 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-H2-A2K9-11A 3 2 3'UTR-3'UTR Intra-chr 129913 ChimerSeq STARFusion TCGA RNA-Seq PRKCH-FLJ22447 PRKCH chr14 61997313 + FLJ22447 chr14 62117680 + Exonic hg19 Non-Cancer TCGA-H2-A2K9-11A 3 2 CDS-5'UTR Intra-chr q23.1 q23.1 129914 ChimerSeq STARFusion TCGA RNA-Seq CTSC-RAB38 CTSC chr11 88033698 - RAB38 chr11 87883123 - Exonic hg19 Non-Cancer TCGA-H2-A2K9-11A 2 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 129915 ChimerSeq STARFusion TCGA RNA-Seq IGSF5-PCP4 IGSF5 chr21 41165540 + PCP4 chr21 41270401 + Exonic hg19 Non-Cancer TCGA-H2-A2K9-11A 2 1 In-Frame Intra-chr q22.2 q22.2 129916 ChimerSeq STARFusion TCGA RNA-Seq TFG-GPR128 TFG chr3 100438902 + GPR128 chr3 100348442 + Exonic hg19 Non-Cancer TCGA-EL-A3ZL-11A 7 50 In-Frame Intra-chr q12.2 129917 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3ZL-11A 4 39 Out-of-frame Intra-chr q11.22 q11.23 129918 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3ZL-11A 4 22 Out-of-frame Intra-chr q11.22 q11.22 129919 ChimerSeq STARFusion TCGA RNA-Seq NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer TCGA-EL-A3ZL-11A 8 4 Out-of-frame Intra-chr p11.2 129920 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-EL-A3ZL-11A 7 7 Out-of-frame Inter-chr q13.13 p12.3 129921 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3MY-11A 7 21 Out-of-frame Intra-chr q11.22 q11.23 129922 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3MY-11A 7 15 Out-of-frame Intra-chr q11.22 q11.22 129923 ChimerSeq STARFusion TCGA RNA-Seq TG-GNAS TG chr8 133941437 + GNAS chr20 57470667 + Exonic hg19 Non-Cancer TCGA-EL-A3MY-11A 2 31 In-Frame Inter-chr q24.22 q13.32 Oncogene 129924 ChimerSeq STARFusion TCGA RNA-Seq SF3B2-TG SF3B2 chr11 65835823 + TG chr8 134030114 + Exonic hg19 Non-Cancer TCGA-EL-A3MY-11A 8 3 Out-of-frame Inter-chr q13.1 q24.22 129925 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-EL-A3MY-11A 6 6 Out-of-frame Inter-chr q13.13 p12.3 129926 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-FY-A3TY-11A 5 37 Out-of-frame Intra-chr q11.22 q11.23 129927 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-FY-A3TY-11A 5 20 Out-of-frame Intra-chr q11.22 q11.22 129928 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106209409 - Exonic hg19 Non-Cancer TCGA-EL-A3H1-11A 98 2 Out-of-frame Inter-chr q11.21 32.33 129929 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106209409 - Exonic hg19 Non-Cancer TCGA-EL-A3H1-11A 98 2 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129930 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106237744 - Exonic hg19 Non-Cancer TCGA-EL-A3H1-11A 71 2 Out-of-frame Inter-chr q11.21 32.33 129931 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106237744 - Exonic hg19 Non-Cancer TCGA-EL-A3H1-11A 71 2 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129932 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGHG3 C22orf39 chr22 19344505 - IGHG3 chr14 106237744 - Exonic hg19 Non-Cancer TCGA-EL-A3H1-11A 71 1 Out-of-frame Inter-chr q11.21 129933 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGHG3 HIRA chr22 19344505 - IGHG3 chr14 106237744 - Exonic hg19 Non-Cancer TCGA-EL-A3H1-11A 71 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 129934 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106136183 - Exonic hg19 Non-Cancer TCGA-EL-A3H1-11A 61 2 Out-of-frame Inter-chr q11.21 32.33 129935 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106136183 - Exonic hg19 Non-Cancer TCGA-EL-A3H1-11A 61 2 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129936 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106111128 - Exonic hg19 Non-Cancer TCGA-EL-A3H1-11A 60 2 Out-of-frame Inter-chr q11.21 32.33 129937 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106111128 - Exonic hg19 Non-Cancer TCGA-EL-A3H1-11A 60 2 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129938 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106092404 - Exonic hg19 Non-Cancer TCGA-EL-A3H1-11A 33 2 Out-of-frame Inter-chr q11.21 32.33 129939 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106092404 - Exonic hg19 Non-Cancer TCGA-EL-A3H1-11A 33 2 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129940 ChimerSeq STARFusion TCGA RNA-Seq CTSB-TG CTSB chr8 11705577 - TG chr8 134042123 + Exonic hg19 Non-Cancer TCGA-EL-A3H1-11A 3 66 Out-of-frame Intra-chr p23.1 q24.22 129941 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3H1-11A 8 23 Out-of-frame Intra-chr q11.22 q11.23 129942 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3H1-11A 8 17 Out-of-frame Intra-chr q11.22 q11.22 129943 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-EL-A3H1-11A 10 6 Out-of-frame Inter-chr q13.13 p12.3 129944 ChimerSeq STARFusion TCGA RNA-Seq GGNBP2-MYO19 GGNBP2 chr17 34916711 + MYO19 chr17 34863351 - Exonic hg19 Non-Cancer TCGA-EL-A3H1-11A 4 10 Out-of-frame Intra-chr Tumor suppressor gene q12 129945 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3MX-11A 12 25 Out-of-frame Intra-chr q11.22 q11.23 129946 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3MX-11A 12 15 Out-of-frame Intra-chr q11.22 q11.22 129947 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-BMS1P4 TIMM23 chr10 51606988 - BMS1P4 chr10 75473090 - Exonic hg19 Non-Cancer TCGA-EM-A1CV-11A 2 4 CDS-3'UTR Intra-chr q11.22 q22.2 129948 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3GZ-11A 4 35 Out-of-frame Intra-chr q11.22 q11.23 129949 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854180 - CBX3 chr7 26241365 + Exonic hg19 Non-Cancer TCGA-EL-A3GZ-11A 4 25 Out-of-frame Inter-chr q15.1 p15.2 129950 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3GZ-11A 4 20 Out-of-frame Intra-chr q11.22 q11.22 129951 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106209409 - Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 120 1 Out-of-frame Inter-chr q11.21 32.33 129952 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGHG1 C22orf39 chr22 19344505 - IGHG1 chr14 106209409 - Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 120 1 Out-of-frame Inter-chr q11.21 q32.33 129953 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106209409 - Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 120 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129954 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGHG1 HIRA chr22 19344505 - IGHG1 chr14 106209409 - Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 120 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene q32.33 129955 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106237744 - Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 98 1 Out-of-frame Inter-chr q11.21 32.33 129956 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106237744 - Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 98 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129957 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGHG1 C22orf39 chr22 19344505 - IGHG1 chr14 106237744 - Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 93 1 Out-of-frame Inter-chr q11.21 q32.33 129958 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGHG1 HIRA chr22 19344505 - IGHG1 chr14 106237744 - Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 93 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene q32.33 129959 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGH@ STK25 chr2 242434915 - IGH@ chr14 106209410 - Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 91 1 Out-of-frame Inter-chr q37.3 32.33 129960 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGHG1 STK25 chr2 242434915 - IGHG1 chr14 106209410 - Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 91 1 Out-of-frame Inter-chr q37.3 q32.33 129961 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106111128 - Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 90 1 Out-of-frame Inter-chr q11.21 32.33 129962 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106111128 - Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 90 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129963 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106136183 - Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 89 1 Out-of-frame Inter-chr q11.21 32.33 129964 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106136183 - Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 89 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129965 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGH@ STK25 chr2 242434915 - IGH@ chr14 106111129 - Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 75 1 Out-of-frame Inter-chr q37.3 32.33 129966 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGH@ STK25 chr2 242434915 - IGH@ chr14 106136184 - Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 73 1 Out-of-frame Inter-chr q37.3 32.33 129967 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106092404 - Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 64 1 Out-of-frame Inter-chr q11.21 32.33 129968 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106092404 - Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 64 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129969 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGHG1 STK25 chr2 242434915 - IGHG1 chr14 106237745 - Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 55 1 Out-of-frame Inter-chr q37.3 q32.33 129970 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGH@ STK25 chr2 242434915 - IGH@ chr14 106092405 - Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 38 1 Out-of-frame Inter-chr q37.3 32.33 129971 ChimerSeq STARFusion TCGA RNA-Seq STK25-IGH@ STK25 chr2 242434915 - IGH@ chr14 106237745 - Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 21 1 Out-of-frame Inter-chr q37.3 32.33 129972 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 9 34 Out-of-frame Intra-chr q11.22 q11.23 129973 ChimerSeq STARFusion TCGA RNA-Seq ARAP2-IGKC ARAP2 chr4 36150094 - IGKC chr2 89161072 - Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 13 1 Out-of-frame Inter-chr p14 p11.2 129974 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 9 17 Out-of-frame Intra-chr q11.22 q11.22 129975 ChimerSeq STARFusion TCGA RNA-Seq PLCXD1-IGH@ PLCXD1 chrX 209756 + IGH@ chr14 106209410 - Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 10 0 Out-of-frame Inter-chr p22.33 32.33 129976 ChimerSeq STARFusion TCGA RNA-Seq PLCXD1-IGHG1 PLCXD1 chrY 159756 + IGHG1 chr14 106209410 - Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 10 0 Out-of-frame Inter-chr p22.33 q32.33 129977 ChimerSeq STARFusion TCGA RNA-Seq IGH@-TINAGL1 IGH@ chr14 106134591 - TINAGL1 chr1 32052503 + Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 7 2 Out-of-frame Inter-chr 32.33 p35.2 129978 ChimerSeq STARFusion TCGA RNA-Seq NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer TCGA-EL-A3T1-11A 7 2 Out-of-frame Intra-chr p11.2 129979 ChimerSeq STARFusion TCGA RNA-Seq RPS11-IGH@ RPS11 chr19 50000847 + IGH@ chr14 106330457 - Exonic hg19 Non-Cancer TCGA-BJ-A28X-11A 125 5 Out-of-frame Inter-chr q13.33 32.33 129980 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106175003 - Exonic hg19 Non-Cancer TCGA-BJ-A28X-11A 52 2 Out-of-frame Inter-chr q11.21 32.33 129981 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106175003 - Exonic hg19 Non-Cancer TCGA-BJ-A28X-11A 52 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129982 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106209409 - Exonic hg19 Non-Cancer TCGA-BJ-A28X-11A 42 2 Out-of-frame Inter-chr q11.21 32.33 129983 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGHG1 C22orf39 chr22 19344505 - IGHG1 chr14 106209409 - Exonic hg19 Non-Cancer TCGA-BJ-A28X-11A 42 1 Out-of-frame Inter-chr q11.21 q32.33 129984 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106209409 - Exonic hg19 Non-Cancer TCGA-BJ-A28X-11A 42 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129985 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106136183 - Exonic hg19 Non-Cancer TCGA-BJ-A28X-11A 37 2 Out-of-frame Inter-chr q11.21 32.33 129986 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106136183 - Exonic hg19 Non-Cancer TCGA-BJ-A28X-11A 37 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129987 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BJ-A28X-11A 17 46 3'UTR-3'UTR Intra-chr 129988 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BJ-A28X-11A 9 39 Out-of-frame Intra-chr q11.22 q11.23 129989 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BJ-A28X-11A 9 18 Out-of-frame Intra-chr q11.22 q11.22 129990 ChimerSeq STARFusion TCGA RNA-Seq GPX3-IGHG1 GPX3 chr5 150400491 + IGHG1 chr14 106237745 - Exonic hg19 Non-Cancer TCGA-BJ-A28X-11A 7 5 Out-of-frame Inter-chr q33.1 Tumor suppressor gene q32.33 129991 ChimerSeq STARFusion TCGA RNA-Seq C15orf57-CBX3 C15orf57 chr15 40854180 - CBX3 chr7 26241365 + Exonic hg19 Non-Cancer TCGA-BJ-A28X-11A 3 9 Out-of-frame Inter-chr q15.1 p15.2 129992 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106209409 - Exonic hg19 Non-Cancer TCGA-EL-A3H7-11A 36 1 Out-of-frame Inter-chr q11.21 32.33 129993 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGHG1 C22orf39 chr22 19344505 - IGHG1 chr14 106209409 - Exonic hg19 Non-Cancer TCGA-EL-A3H7-11A 36 1 Out-of-frame Inter-chr q11.21 q32.33 129994 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106209409 - Exonic hg19 Non-Cancer TCGA-EL-A3H7-11A 36 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129995 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGHG1 HIRA chr22 19344505 - IGHG1 chr14 106209409 - Exonic hg19 Non-Cancer TCGA-EL-A3H7-11A 36 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene q32.33 129996 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106136183 - Exonic hg19 Non-Cancer TCGA-EL-A3H7-11A 32 1 Out-of-frame Inter-chr q11.21 32.33 129997 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106136183 - Exonic hg19 Non-Cancer TCGA-EL-A3H7-11A 32 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 129998 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106237744 - Exonic hg19 Non-Cancer TCGA-EL-A3H7-11A 22 1 Out-of-frame Inter-chr q11.21 32.33 129999 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106237744 - Exonic hg19 Non-Cancer TCGA-EL-A3H7-11A 22 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 130000 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGHG1 C22orf39 chr22 19344505 - IGHG1 chr14 106237744 - Exonic hg19 Non-Cancer TCGA-EL-A3H7-11A 19 1 Out-of-frame Inter-chr q11.21 q32.33 130001 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGHG1 HIRA chr22 19344505 - IGHG1 chr14 106237744 - Exonic hg19 Non-Cancer TCGA-EL-A3H7-11A 19 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene q32.33 130002 ChimerSeq STARFusion TCGA RNA-Seq C22orf39-IGH@ C22orf39 chr22 19344505 - IGH@ chr14 106092404 - Exonic hg19 Non-Cancer TCGA-EL-A3H7-11A 14 1 Out-of-frame Inter-chr q11.21 32.33 130003 ChimerSeq STARFusion TCGA RNA-Seq HIRA-IGH@ HIRA chr22 19344505 - IGH@ chr14 106092404 - Exonic hg19 Non-Cancer TCGA-EL-A3H7-11A 14 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 32.33 130004 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3H7-11A 5 20 Out-of-frame Intra-chr q11.22 q11.23 130005 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3H7-11A 5 15 Out-of-frame Intra-chr q11.22 q11.22 130006 ChimerSeq STARFusion TCGA RNA-Seq NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer TCGA-EL-A3T8-11A 9 1 Out-of-frame Intra-chr p11.2 130007 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3T8-11A 2 11 Out-of-frame Intra-chr q11.22 q11.22 130008 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3ZT-11A 7 26 Out-of-frame Intra-chr q11.22 q11.23 130009 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-EL-A3ZT-11A 7 13 Out-of-frame Intra-chr q11.22 q11.22 130010 ChimerSeq STARFusion TCGA RNA-Seq SAMD14-IGH@ SAMD14 chr17 48206974 - IGH@ chr14 106329449 - Exonic hg19 Non-Cancer TCGA-BJ-A28W-11A 50 1 Out-of-frame Inter-chr q21.33 32.33 130011 ChimerSeq STARFusion TCGA RNA-Seq MEGF8-IGH@ MEGF8 chr19 42880499 + IGH@ chr14 106209410 - Exonic hg19 Non-Cancer TCGA-BJ-A28W-11A 22 1 Out-of-frame Inter-chr q13.2 32.33 130012 ChimerSeq STARFusion TCGA RNA-Seq MEGF8-IGHG1 MEGF8 chr19 42880499 + IGHG1 chr14 106209410 - Exonic hg19 Non-Cancer TCGA-BJ-A28W-11A 22 1 Out-of-frame Inter-chr q13.2 q32.33 130013 ChimerSeq STARFusion TCGA RNA-Seq MEGF8-IGH@ MEGF8 chr19 42880499 + IGH@ chr14 106111129 - Exonic hg19 Non-Cancer TCGA-BJ-A28W-11A 14 1 Out-of-frame Inter-chr q13.2 32.33 130014 ChimerSeq STARFusion TCGA RNA-Seq B2M-GNAS B2M chr15 45003811 + GNAS chr20 57470667 + Exonic hg19 Non-Cancer TCGA-BJ-A28W-11A 2 6 In-Frame Inter-chr Oncogene q13.32 Oncogene 130015 ChimerSeq STARFusion TCGA RNA-Seq ACKR3-ZNF395 ACKR3 chr2 237489977 + ZNF395 chr8 28205726 - Exonic hg19 Non-Cancer TCGA-FL-A1YM-11A 3 0 Out-of-frame Inter-chr q37.3 p21.1 Transcription factor 130016 ChimerSeq STARFusion TCGA RNA-Seq CHD1L-PTMS CHD1L chr1 146765396 + PTMS chr12 6875798 + Exonic hg19 Non-Cancer TCGA-FL-A1YM-11A 3 0 Out-of-frame Inter-chr q21.1 p13.31 130017 ChimerSeq STARFusion TCGA RNA-Seq CYGB-JUN CYGB chr17 74527671 - JUN chr1 59248035 - Exonic hg19 Non-Cancer TCGA-FL-A1YM-11A 3 0 Out-of-frame Inter-chr q25.1 Tumor suppressor gene p32.1 Oncogene Transcription factor 130018 ChimerSeq STARFusion TCGA RNA-Seq FTH1-CD44 FTH1 chr11 61732282 - CD44 chr11 35160867 + Exonic hg19 Non-Cancer TCGA-FL-A1YM-11A 3 0 Out-of-frame Intra-chr q12.3 p13 Oncogene Tumor suppressor gene 130019 ChimerSeq STARFusion TCGA RNA-Seq GLG1-EEF1B2 GLG1 chr16 74511321 - EEF1B2 chr2 207026165 + Exonic hg19 Non-Cancer TCGA-FL-A1YM-11A 3 0 Out-of-frame Inter-chr q23.1 130020 ChimerSeq STARFusion TCGA RNA-Seq MALAT1-HAND2 MALAT1 chr11 65267968 + HAND2 chr4 174448210 - Exonic hg19 Non-Cancer TCGA-FL-A1YM-11A 3 0 Out-of-frame Inter-chr q13.1 q34.1 Transcription factor 130021 ChimerSeq STARFusion TCGA RNA-Seq MGAT4B-DDX46 MGAT4B chr5 179224868 - DDX46 chr5 134152136 + Exonic hg19 Non-Cancer TCGA-FL-A1YM-11A 3 0 Out-of-frame Intra-chr q31.1 130022 ChimerSeq STARFusion TCGA RNA-Seq PBXIP1-SESN3 PBXIP1 chr1 154916949 - SESN3 chr11 94901757 - Exonic hg19 Non-Cancer TCGA-FL-A1YM-11A 3 0 Out-of-frame Inter-chr q21.3 q21 130023 ChimerSeq STARFusion TCGA RNA-Seq PHF2-IGFBP3 PHF2 chr9 96440053 + IGFBP3 chr7 45953120 - Exonic hg19 Non-Cancer TCGA-FL-A1YM-11A 3 0 Out-of-frame Inter-chr q22.31 p12.3 Tumor suppressor gene 130024 ChimerSeq STARFusion TCGA RNA-Seq RBM15B-PRSS23 RBM15B chr3 51431233 + PRSS23 chr11 86519297 + Exonic hg19 Non-Cancer TCGA-FL-A1YM-11A 3 0 Out-of-frame Inter-chr p21.2 q14.2 130025 ChimerSeq STARFusion TCGA RNA-Seq SIK1-LAMC2 SIK1 chr21 44836769 - LAMC2 chr1 183213430 + Exonic hg19 Non-Cancer TCGA-FL-A1YM-11A 3 0 Out-of-frame Inter-chr q22.3 Tumor suppressor gene q25.3 130026 ChimerSeq STARFusion TCGA RNA-Seq SSH3-GRAMD4 SSH3 chr11 67079430 + GRAMD4 chr22 47073328 + Exonic hg19 Non-Cancer TCGA-FL-A1YM-11A 3 0 Out-of-frame Inter-chr q13.2 q13.31 130027 ChimerSeq STARFusion TCGA RNA-Seq TMCC2-GTF3C5 TMCC2 chr1 205242122 + GTF3C5 chr9 135933398 + Exonic hg19 Non-Cancer TCGA-FL-A1YM-11A 3 0 Out-of-frame Inter-chr q32.1 q34.13 130028 ChimerSeq STARFusion TCGA RNA-Seq ZNF627-NRD1 ZNF627 chr19 11727917 + NRD1 chr1 52255025 - Exonic hg19 Non-Cancer TCGA-FL-A1YM-11A 3 0 Out-of-frame Inter-chr p13.2 Transcription factor 130029 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-AJ-A3NH-11A 2 6 3'UTR-3'UTR Intra-chr 130030 ChimerSeq STARFusion TCGA RNA-Seq FITM2-OSER1 FITM2 chr20 42939616 - OSER1 chr20 42835638 - Exonic hg19 Non-Cancer TCGA-AJ-A3NH-11A 3 1 Out-of-frame Intra-chr q13.12 q13.12 130031 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-AJ-A3NC-11A 6 13 3'UTR-3'UTR Intra-chr 130032 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-AJ-A3NC-11A 3 11 Out-of-frame Inter-chr q13.13 p12.3 130033 ChimerSeq STARFusion TCGA RNA-Seq FITM2-OSER1 FITM2 chr20 42939616 - OSER1 chr20 42835638 - Exonic hg19 Non-Cancer TCGA-AJ-A3NC-11A 2 3 Out-of-frame Intra-chr q13.12 q13.12 130034 ChimerSeq STARFusion TCGA RNA-Seq CTDSP1-C9orf3 CTDSP1 chr2 219267128 + C9orf3 chr9 97848964 + Exonic hg19 Non-Cancer TCGA-AJ-A3NC-11A 2 1 CDS-3'UTR Inter-chr q35 q22.32 130035 ChimerSeq STARFusion TCGA RNA-Seq ZNF664-FAM101A ZNF664 chr12 124472685 + FAM101A chr12 124634141 + Exonic hg19 Non-Cancer TCGA-AX-A2HD-11A 3 0 5'UTR-5'UTR Intra-chr q24.31 Transcription factor 130036 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-FL-A1YU-11A 5 0 Out-of-frame Inter-chr q11.2 p22.11 130037 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-AX-A05Y-11A 4 11 3'UTR-3'UTR Intra-chr 130038 ChimerSeq STARFusion TCGA RNA-Seq TES-LPP TES chr7 115898255 + LPP chr3 188427239 + Exonic hg19 Non-Cancer TCGA-AX-A05Y-11A 3 1 Out-of-frame Inter-chr q31.2 Tumor suppressor gene q27.3 Oncogene 130039 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-AX-A05Y-11A 3 0 Out-of-frame Inter-chr q11.2 p22.11 130040 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-BK-A4ZD-11A 4 1 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 130041 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-BK-A4ZD-11A 3 0 Out-of-frame Inter-chr q11.2 p22.11 130042 ChimerSeq STARFusion TCGA RNA-Seq HSPA1A-C2 HSPA1A chr6 31785293 + C2 chr6 31868873 + Exonic hg19 Non-Cancer TCGA-AX-A1CF-11A 3 0 Out-of-frame Intra-chr p21.33 130043 ChimerSeq STARFusion TCGA RNA-Seq HSPA1A-C2 HSPA1A chr6 31785190 + C2 chr6 31868874 + Exonic hg19 Non-Cancer TCGA-AX-A1CF-11A 3 0 Out-of-frame Intra-chr p21.33 130044 ChimerSeq STARFusion TCGA RNA-Seq RPLP2-PDE6A RPLP2 chr11 810039 + PDE6A chr5 149246806 - Exonic hg19 Non-Cancer TCGA-AX-A1CF-11A 3 0 5'UTR-CDS Inter-chr p15.5 q32 130045 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-BG-A2AD-11A 3 3 3'UTR-3'UTR Intra-chr 130046 ChimerSeq STARFusion TCGA RNA-Seq MYH11-FGFR1 MYH11 chr16 15847255 - FGFR1 chr8 38271471 - Exonic hg19 Non-Cancer TCGA-BG-A2AD-11A 3 1 Out-of-frame Inter-chr Oncogene p11.23 TK:FGFR Oncogene 130047 ChimerSeq STARFusion TCGA RNA-Seq SOCS2-CRADD SOCS2 chr12 93968949 + CRADD chr12 94243746 + Exonic hg19 Non-Cancer TCGA-BG-A2AD-11A 2 3 Out-of-frame Intra-chr q22 q22 130048 ChimerSeq STARFusion TCGA RNA-Seq TVP23C-CDRT4 TVP23C chr17 15443747 - CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer TCGA-BG-A2AD-11A 2 1 Out-of-frame Intra-chr p12 p12 130049 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17A KANSL1 chr17 44171926 - ARL17A chr17 44648235 - Exonic hg19 Non-Cancer TCGA-DI-A2QU-11A 4 0 CDS-5'UTR Intra-chr q21.31 130050 ChimerSeq STARFusion TCGA RNA-Seq DPH7-PTP4A3 DPH7 chr9 140473090 - PTP4A3 chr8 142431488 + Exonic hg19 Non-Cancer TCGA-FL-A1YG-11A 6 0 Out-of-frame Inter-chr q34.3 q24.3 130051 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-FL-A1YG-11A 4 6 3'UTR-3'UTR Intra-chr 130052 ChimerSeq STARFusion TCGA RNA-Seq TPM2-ACTG1 TPM2 chr9 35685061 - ACTG1 chr17 79478652 - Exonic hg19 Non-Cancer TCGA-FL-A1YG-11A 2 3 In-Frame Inter-chr p13.3 q25.3 130053 ChimerSeq STARFusion TCGA RNA-Seq CPSF6-C9orf3 CPSF6 chr12 69656342 + C9orf3 chr9 97848964 + Exonic hg19 Non-Cancer TCGA-FL-A1YG-11A 2 1 3'UTR-3'UTR Inter-chr q15 q22.32 130054 ChimerSeq STARFusion TCGA RNA-Seq DAZAP2-TMEM167A DAZAP2 chr12 51637219 + TMEM167A chr5 82349161 - Exonic hg19 Non-Cancer TCGA-DI-A2QY-11A 3 1 Out-of-frame Inter-chr q13.13 q14.2 130055 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-DI-A2QY-11A 3 0 Out-of-frame Inter-chr q11.2 p22.11 130056 ChimerSeq STARFusion TCGA RNA-Seq NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer TCGA-AX-A1CK-11A 15 0 Out-of-frame Intra-chr p11.2 130057 ChimerSeq STARFusion TCGA RNA-Seq E2F4-RPL14 E2F4 chr16 67229791 + RPL14 chr3 40503545 + Exonic hg19 Non-Cancer TCGA-AX-A1CK-11A 4 0 Out-of-frame Inter-chr q22.1 Transcription factor p22.1 130058 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-AX-A1CK-11A 4 0 Out-of-frame Inter-chr q11.2 p22.11 130059 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-AX-A0IZ-11A 3 2 Out-of-frame Inter-chr q13.13 p12.3 130060 ChimerSeq STARFusion TCGA RNA-Seq KANSL1-ARL17B KANSL1 chr17 44171926 - ARL17B chr17 44430296 - Exonic hg19 Non-Cancer TCGA-FL-A1YI-11A 6 2 3'UTR-3'UTR Intra-chr 130061 ChimerSeq STARFusion TCGA RNA-Seq ARSG-PRKAR1A ARSG chr17 66397591 + PRKAR1A chr17 66511535 + Exonic hg19 Non-Cancer TCGA-FL-A1YI-11A 4 4 CDS-5'UTR Intra-chr q24.2 q24.2 Oncogene Tumor suppressor gene 130062 ChimerSeq STARFusion TCGA RNA-Seq PCBP2-CDS2 PCBP2 chr12 53873467 + CDS2 chr20 5177892 + Exonic hg19 Non-Cancer TCGA-FL-A1YI-11A 3 2 Out-of-frame Inter-chr q13.13 p12.3 130063 ChimerSeq STARFusion TCGA RNA-Seq POLR2G-STOX1 POLR2G chr11 62532877 + STOX1 chr10 70652345 + Exonic hg19 Non-Cancer TCGA-AX-A2HA-11A 2 0 In-Frame Inter-chr q12.3 q22.1 130064 ChimerSeq STARFusion TCGA RNA-Seq CWF19L1-RFWD3 CWF19L1 chr10 102013633 - RFWD3 chr16 74655593 - Exonic hg19 Non-Cancer TCGA-FL-A3WE-11A 9 3 Out-of-frame Inter-chr q24.31 q23.1 130065 ChimerSeq STARFusion TCGA RNA-Seq PLXDC1-TAF13 PLXDC1 chr17 37222857 - TAF13 chr1 109605645 - Exonic hg19 Non-Cancer TCGA-FL-A3WE-11A 4 1 Out-of-frame Inter-chr q12 p13.3 130066 ChimerSeq STARFusion TCGA RNA-Seq NIPA2-POLA1 NIPA2 chr15 23005214 - POLA1 chrX 24721385 + Exonic hg19 Non-Cancer TCGA-AJ-A3NE-11A 4 0 Out-of-frame Inter-chr q11.2 p22.11 130067 ChimerSeq STARFusion TCGA RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 + SASH1 chr6 148711270 + Exonic hg19 Non-Cancer TCGA-AJ-A3NE-11A 2 1 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 130068 ChimerSeq STARFusion TCGA RNA-Seq TVP23C-CDRT4 TVP23C chr17 15449099 - CDRT4 chr17 15343599 - Exonic hg19 Non-Cancer TCGA-FL-A1YL-11A 2 4 Out-of-frame Intra-chr p12 p12 130069 ChimerSeq STARFusion TCGA RNA-Seq NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer TCGA-E6-A1M0-11A 11 0 Out-of-frame Intra-chr p11.2 130070 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-LINC00843 TIMM23 chr10 51606988 - LINC00843 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BK-A13C-11A 3 0 Out-of-frame Intra-chr q11.22 q11.23 130071 ChimerSeq STARFusion TCGA RNA-Seq TIMM23-PARGP1 TIMM23 chr10 51606988 - PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer TCGA-BK-A13C-11A 3 0 Out-of-frame Intra-chr q11.22 q11.22 130072 ChimerSeq STARFusion Babiceanu et IGH@-FCHSD1 IGH@ chr14 106725200 - FCHSD1 chr5 141020548 - Exonic hg19 Non-Cancer ERR188264 3 1 Out-of-frame Inter-chr 32.33 q31.3 130073 ChimerSeq STARFusion Babiceanu et PDE6B-PPP2R2D PDE6B chr4 619882 + PPP2R2D chr10 133747960 + Exonic hg19 Non-Cancer ERR188157 10 0 Out-of-frame Inter-chr p16.3 q26.3 130074 ChimerSeq STARFusion Babiceanu et CCL22-RN7SL1 CCL22 chr16 57399565 + RN7SL1 chr14 50053372 + Exonic hg19 Non-Cancer ERR188388 3 11 Out-of-frame Inter-chr q21 q21.3 130075 ChimerSeq STARFusion Babiceanu et GAPDH-ACTG1 GAPDH chr12 6646544 + ACTG1 chr17 79479145 - Exonic hg19 Non-Cancer ERR188388 4 1 Out-of-frame Inter-chr p13.31 q25.3 130076 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188472 18 0 Out-of-frame Intra-chr p11.2 130077 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188183 12 0 Out-of-frame Intra-chr p11.2 130078 ChimerSeq STARFusion Babiceanu et HILPDA-RPL7L1 HILPDA chr7 128096754 + RPL7L1 chr6 42857115 + Exonic hg19 Non-Cancer ERR188183 3 0 Out-of-frame Inter-chr q32.1 p21.1 130079 ChimerSeq STARFusion Babiceanu et LRP10-IGKC LRP10 chr14 23350645 + IGKC chr2 89160430 - Exonic hg19 Non-Cancer ERR188266 4 0 Out-of-frame Inter-chr q11.2 p11.2 130080 ChimerSeq STARFusion Babiceanu et LRP10-IGKJ4 LRP10 chr14 23350645 + IGKJ4 chr2 89160430 - Exonic hg19 Non-Cancer ERR188266 4 0 Out-of-frame Inter-chr q11.2 p11.2 130081 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188373 7 0 Out-of-frame Intra-chr p11.2 130082 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188358 9 0 Out-of-frame Intra-chr p11.2 130083 ChimerSeq STARFusion Babiceanu et GPM6B-TMSB4X GPM6B chrX 13791196 - TMSB4X chrX 12994367 + Exonic hg19 Non-Cancer ERR188358 4 0 Out-of-frame Intra-chr p22.2 p22.2 130084 ChimerSeq STARFusion Babiceanu et VIM-KRT81 VIM chr10 17271729 + KRT81 chr12 52684890 - Exonic hg19 Non-Cancer ERR188051 3 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130085 ChimerSeq STARFusion Babiceanu et VIM-KRT86 VIM chr10 17271729 + KRT86 chr12 52696060 + Exonic hg19 Non-Cancer ERR188051 3 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130086 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188093 18 0 Out-of-frame Intra-chr p11.2 130087 ChimerSeq STARFusion Babiceanu et SUZ12P-CRLF3 SUZ12P chr17 29096983 + CRLF3 chr17 29100515 - Exonic hg19 Non-Cancer ERR188093 3 4 Out-of-frame Intra-chr q11.2 130088 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188221 11 0 Out-of-frame Intra-chr p11.2 130089 ChimerSeq STARFusion Babiceanu et MYO1G-PCNXL3 MYO1G chr7 45010191 - PCNXL3 chr11 65384295 + Exonic hg19 Non-Cancer ERR188221 2 0 Out-of-frame Inter-chr p13 130090 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188410 9 0 Out-of-frame Intra-chr p11.2 130091 ChimerSeq STARFusion Babiceanu et EEF1A1-RPS4X EEF1A1 chr6 74227755 - RPS4X chrX 71494945 - Exonic hg19 Non-Cancer ERR188410 3 1 Out-of-frame Inter-chr q13 Tumor suppressor gene q13.1 130092 ChimerSeq STARFusion Babiceanu et CHSY1-CNTN6 CHSY1 chr15 101775287 - CNTN6 chr3 1269502 + Exonic hg19 Non-Cancer ERR188339 4 3 Out-of-frame Inter-chr q26.3 p26.3 130093 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188387 5 0 Out-of-frame Intra-chr p11.2 130094 ChimerSeq STARFusion Babiceanu et ADCY3-UBR4 ADCY3 chr2 25043593 - UBR4 chr1 19436958 - Exonic hg19 Non-Cancer ERR188387 2 0 In-Frame Inter-chr p23.3 p36.13 130095 ChimerSeq STARFusion Babiceanu et MAML2-SLC35F2 MAML2 chr11 96074547 - SLC35F2 chr11 107663526 - Exonic hg19 Non-Cancer ERR188387 2 0 In-Frame Intra-chr q21 Oncogene q22.3 130096 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188275 4 0 Out-of-frame Intra-chr p11.2 130097 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188422 9 0 Out-of-frame Intra-chr p11.2 130098 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188178 15 0 Out-of-frame Intra-chr p11.2 130099 ChimerSeq STARFusion Babiceanu et EIF3A-LINC00867 EIF3A chr10 120828958 - LINC00867 chr10 120117284 + Exonic hg19 Non-Cancer ERR188295 8 8 Out-of-frame Intra-chr q26.11 q26.11 130100 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188295 7 0 Out-of-frame Intra-chr p11.2 130101 ChimerSeq STARFusion Babiceanu et VIM-KRT81 VIM chr10 17271726 + KRT81 chr12 52684893 - Exonic hg19 Non-Cancer ERR188295 4 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130102 ChimerSeq STARFusion Babiceanu et VIM-KRT86 VIM chr10 17271726 + KRT86 chr12 52696057 + Exonic hg19 Non-Cancer ERR188295 4 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130103 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188383 7 0 Out-of-frame Intra-chr p11.2 130104 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188284 30 0 Out-of-frame Intra-chr p11.2 130105 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188230 9 0 Out-of-frame Intra-chr p11.2 130106 ChimerSeq STARFusion Babiceanu et CCL22-RN7SL1 CCL22 chr16 57399560 + RN7SL1 chr14 50053367 + Exonic hg19 Non-Cancer ERR188230 3 10 Out-of-frame Inter-chr q21 q21.3 130107 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188428 6 0 Out-of-frame Intra-chr p11.2 130108 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188044 19 0 Out-of-frame Intra-chr p11.2 130109 ChimerSeq STARFusion Babiceanu et CPSF6-SLX4IP CPSF6 chr12 69656342 + SLX4IP chr20 10541348 + Exonic hg19 Non-Cancer ERR188079 2 0 Out-of-frame Inter-chr q15 p12.2 130110 ChimerSeq STARFusion Babiceanu et TMCC3-CCDC41 TMCC3 chr12 94972170 - CCDC41 chr12 94806367 - Exonic hg19 Non-Cancer ERR188079 2 0 CDS-5'UTR Intra-chr q22 130111 ChimerSeq STARFusion Babiceanu et IKBKG-IGL@ IKBKG chrX 153776175 + IGL@ chr22 22385558 + Exonic hg19 Non-Cancer ERR188378 6 0 Out-of-frame Inter-chr q28 q11.22 130112 ChimerSeq STARFusion Babiceanu et MX1-IGH@ MX1 chr21 42798166 + IGH@ chr14 106351917 - Exonic hg19 Non-Cancer ERR188378 5 1 Out-of-frame Inter-chr q22.3 32.33 130113 ChimerSeq STARFusion Babiceanu et MX1-IGHM MX1 chr21 42798166 + IGHM chr14 106351917 - Exonic hg19 Non-Cancer ERR188378 5 1 Out-of-frame Inter-chr q22.3 q32.33 130114 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188222 24 0 Out-of-frame Intra-chr p11.2 130115 ChimerSeq STARFusion Babiceanu et TFG-GPR128 TFG chr3 100438902 + GPR128 chr3 100348442 + Exonic hg19 Non-Cancer ERR188317 24 27 In-Frame Intra-chr q12.2 130116 ChimerSeq STARFusion Babiceanu et ATHL1-RPL37 ATHL1 chr11 296072 + RPL37 chr5 40834710 - Exonic hg19 Non-Cancer ERR188317 4 0 Out-of-frame Inter-chr p13.1 130117 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188206 6 0 Out-of-frame Intra-chr p11.2 130118 ChimerSeq STARFusion Babiceanu et IGL@-DAZAP1 IGL@ chr22 22764603 + DAZAP1 chr19 1432947 + Exonic hg19 Non-Cancer ERR188206 3 0 Out-of-frame Inter-chr q11.22 p13.3 130119 ChimerSeq STARFusion Babiceanu et PDE6B-PPP2R2D PDE6B chr4 619882 + PPP2R2D chr10 133747960 + Exonic hg19 Non-Cancer ERR188117 6 0 Out-of-frame Inter-chr p16.3 q26.3 130120 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188117 5 0 Out-of-frame Intra-chr p11.2 130121 ChimerSeq STARFusion Babiceanu et CCDC41-IGL@ CCDC41 chr12 94703682 - IGL@ chr22 23247170 + Exonic hg19 Non-Cancer ERR188117 3 0 Out-of-frame Inter-chr q11.22 130122 ChimerSeq STARFusion Babiceanu et CCDC41-IGLC3 CCDC41 chr12 94703682 - IGLC3 chr22 23247170 + Exonic hg19 Non-Cancer ERR188117 3 0 Out-of-frame Inter-chr q11.22 130123 ChimerSeq STARFusion Babiceanu et CCDC41-IGLJ3 CCDC41 chr12 94703682 - IGLJ3 chr22 23247170 + Exonic hg19 Non-Cancer ERR188117 3 0 Out-of-frame Inter-chr q11.22 130124 ChimerSeq STARFusion Babiceanu et VIM-KRT81 VIM chr10 17271729 + KRT81 chr12 52684890 - Exonic hg19 Non-Cancer ERR188470 6 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130125 ChimerSeq STARFusion Babiceanu et VIM-KRT86 VIM chr10 17271729 + KRT86 chr12 52696060 + Exonic hg19 Non-Cancer ERR188470 6 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130126 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188269 30 0 Out-of-frame Intra-chr p11.2 130127 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188249 18 0 Out-of-frame Intra-chr p11.2 130128 ChimerSeq STARFusion Babiceanu et CHTF18-IGH@ CHTF18 chr16 838694 + IGH@ chr14 106331649 - Exonic hg19 Non-Cancer ERR188249 15 1 Out-of-frame Inter-chr p13.3 32.33 130129 ChimerSeq STARFusion Babiceanu et VIM-KRT81 VIM chr10 17271726 + KRT81 chr12 52684893 - Exonic hg19 Non-Cancer ERR188249 6 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130130 ChimerSeq STARFusion Babiceanu et VIM-KRT86 VIM chr10 17271726 + KRT86 chr12 52696057 + Exonic hg19 Non-Cancer ERR188249 6 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130131 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188313 19 0 Out-of-frame Intra-chr p11.2 130132 ChimerSeq STARFusion Babiceanu et RPLP0-EEF1A1 RPLP0 chr12 120637247 - EEF1A1 chr6 74228190 - Exonic hg19 Non-Cancer ERR188313 3 1 Out-of-frame Inter-chr q24.23 q13 Tumor suppressor gene 130133 ChimerSeq STARFusion Babiceanu et C1orf189-TOX C1orf189 chr1 154172935 - TOX chr8 59872567 - Exonic hg19 Non-Cancer ERR188313 3 0 In-Frame Inter-chr q21.3 q12.1 130134 ChimerSeq STARFusion Babiceanu et RCC1-KLK1 RCC1 chr1 28834672 + KLK1 chr19 51323699 - Exonic hg19 Non-Cancer ERR188313 3 0 5'UTR-CDS Inter-chr p35.3 q13.33 130135 ChimerSeq STARFusion Babiceanu et SNHG3-KLK1 SNHG3 chr1 28834672 + KLK1 chr19 51323699 - Exonic hg19 Non-Cancer ERR188313 3 0 5'UTR-CDS Inter-chr p35.3 q13.33 130136 ChimerSeq STARFusion Babiceanu et EEF1A1-RPL7A EEF1A1 chr6 74227596 - RPL7A chr9 136216850 + Exonic hg19 Non-Cancer ERR188473 3 0 Out-of-frame Inter-chr q13 Tumor suppressor gene 130137 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188037 10 0 Out-of-frame Intra-chr p11.2 130138 ChimerSeq STARFusion Babiceanu et INPP5A-LRRC27 INPP5A chr10 134351675 + LRRC27 chr10 134146981 + Exonic hg19 Non-Cancer ERR188040 2 2 CDS-5'UTR Intra-chr q26.3 q26.3 130139 ChimerSeq STARFusion Babiceanu et MDN1-IGH@ MDN1 chr6 90504430 - IGH@ chr14 106331651 - Exonic hg19 Non-Cancer ERR188330 5 1 Out-of-frame Inter-chr q15 32.33 130140 ChimerSeq STARFusion Babiceanu et PDE6B-PPP2R2D PDE6B chr4 619882 + PPP2R2D chr10 133753533 + Exonic hg19 Non-Cancer ERR188057 4 0 Out-of-frame Inter-chr p16.3 q26.3 130141 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188179 5 0 Out-of-frame Intra-chr p11.2 130142 ChimerSeq STARFusion Babiceanu et CCL22-RN7SL1 CCL22 chr16 57399565 + RN7SL1 chr14 50053372 + Exonic hg19 Non-Cancer ERR188179 3 1 Out-of-frame Inter-chr q21 q21.3 130143 ChimerSeq STARFusion Babiceanu et IGH@-PIGS IGH@ chr14 107169940 - PIGS chr17 26898406 - Exonic hg19 Non-Cancer ERR188159 10 0 Out-of-frame Inter-chr 32.33 q11.2 130144 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188423 22 0 Out-of-frame Intra-chr p11.2 130145 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188142 4 0 Out-of-frame Intra-chr p11.2 130146 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188177 9 0 Out-of-frame Intra-chr p11.2 130147 ChimerSeq STARFusion Babiceanu et RPL17P50-P4HA1 RPL17P50 chr10 74765901 - P4HA1 chr10 74767271 - Exonic hg19 Non-Cancer ERR188177 4 0 Out-of-frame Intra-chr q22.1 q22.1 130148 ChimerSeq STARFusion Babiceanu et CCL22-RN7SL1 CCL22 chr16 57399560 + RN7SL1 chr14 50053367 + Exonic hg19 Non-Cancer ERR188237 3 4 Out-of-frame Inter-chr q21 q21.3 130149 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188357 4 0 Out-of-frame Intra-chr p11.2 130150 ChimerSeq STARFusion Babiceanu et COPA-IGH@ COPA chr1 160264342 - IGH@ chr14 106330838 - Exonic hg19 Non-Cancer ERR188111 13 0 Out-of-frame Inter-chr q23.2 32.33 130151 ChimerSeq STARFusion Babiceanu et COPA-IGHG3 COPA chr1 160264342 - IGHG3 chr14 106330838 - Exonic hg19 Non-Cancer ERR188111 13 0 Out-of-frame Inter-chr q23.2 130152 ChimerSeq STARFusion Babiceanu et COPA-IGHJ3 COPA chr1 160264342 - IGHJ3 chr14 106330838 - Exonic hg19 Non-Cancer ERR188111 13 0 Out-of-frame Inter-chr q23.2 q32.33 130153 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188300 12 0 Out-of-frame Intra-chr p11.2 130154 ChimerSeq STARFusion Babiceanu et HSPBP1-ZSWIM6 HSPBP1 chr19 55790899 - ZSWIM6 chr5 60628541 + Exonic hg19 Non-Cancer ERR188113 4 0 Out-of-frame Inter-chr q13.42 q12.1 130155 ChimerSeq STARFusion Babiceanu et VIM-KRT81 VIM chr10 17271729 + KRT81 chr12 52684890 - Exonic hg19 Non-Cancer ERR188113 4 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130156 ChimerSeq STARFusion Babiceanu et VIM-KRT86 VIM chr10 17271729 + KRT86 chr12 52696060 + Exonic hg19 Non-Cancer ERR188113 4 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130157 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188223 24 0 Out-of-frame Intra-chr p11.2 130158 ChimerSeq STARFusion Babiceanu et TIMM23B-PARGP1 TIMM23B chr10 51387763 + PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer ERR188354 11 9 Out-of-frame Intra-chr q11.23 q11.22 130159 ChimerSeq STARFusion Babiceanu et SPATA12-IGKJ1 SPATA12 chr3 57108824 + IGKJ1 chr2 89161435 - Exonic hg19 Non-Cancer ERR188133 3 0 Out-of-frame Inter-chr p14.3 p11.2 130160 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188225 30 0 Out-of-frame Intra-chr p11.2 130161 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188200 16 0 Out-of-frame Intra-chr p11.2 130162 ChimerSeq STARFusion Babiceanu et BTBD2-MKNK2 BTBD2 chr19 2013546 - MKNK2 chr19 2043581 - Exonic hg19 Non-Cancer ERR188200 8 2 Out-of-frame Intra-chr p13.3 p13.3 130163 ChimerSeq STARFusion Babiceanu et BTBD2-MKNK2 BTBD2 chr19 2015296 - MKNK2 chr19 2043581 - Exonic hg19 Non-Cancer ERR188200 2 2 Out-of-frame Intra-chr p13.3 p13.3 130164 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188130 8 0 Out-of-frame Intra-chr p11.2 130165 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188031 8 0 Out-of-frame Intra-chr p11.2 130166 ChimerSeq STARFusion Babiceanu et RPL17P50-P4HA1 RPL17P50 chr10 74765901 - P4HA1 chr10 74767273 - Exonic hg19 Non-Cancer ERR188031 4 0 Out-of-frame Intra-chr q22.1 q22.1 130167 ChimerSeq STARFusion Babiceanu et ABRACL-PTMA ABRACL chr6 139350012 + PTMA chr2 232576058 + Exonic hg19 Non-Cancer ERR188031 2 0 5'UTR-CDS Inter-chr q24.1 q37.1 130168 ChimerSeq STARFusion Babiceanu et TM9SF1-ATP5B TM9SF1 chr14 24663881 - ATP5B chr12 57032207 - Exonic hg19 Non-Cancer ERR188031 2 0 Out-of-frame Inter-chr q12 q13.3 130169 ChimerSeq STARFusion Babiceanu et TM9SF1-ATP5B TM9SF1 chr14 24663881 - ATP5B chr12 57032207 - Exonic hg19 Non-Cancer ERR188031 2 0 Out-of-frame Inter-chr q12 q13.3 130170 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188103 7 0 Out-of-frame Intra-chr p11.2 130171 ChimerSeq STARFusion Babiceanu et VIM-KRT81 VIM chr10 17271726 + KRT81 chr12 52684893 - Exonic hg19 Non-Cancer ERR188103 7 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130172 ChimerSeq STARFusion Babiceanu et VIM-KRT86 VIM chr10 17271726 + KRT86 chr12 52696057 + Exonic hg19 Non-Cancer ERR188103 7 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130173 ChimerSeq STARFusion Babiceanu et IGH@-GAPDH IGH@ chr14 106174693 - GAPDH chr12 6647419 + Exonic hg19 Non-Cancer ERR188353 3 6 Out-of-frame Inter-chr 32.33 p13.31 130174 ChimerSeq STARFusion Babiceanu et E2F4-RPL14 E2F4 chr16 67229791 + RPL14 chr3 40503548 + Exonic hg19 Non-Cancer ERR188353 4 0 Out-of-frame Inter-chr q22.1 Transcription factor p22.1 130175 ChimerSeq STARFusion Babiceanu et IGHA1-GAPDH IGHA1 chr14 106174693 - GAPDH chr12 6647419 + Exonic hg19 Non-Cancer ERR188353 3 2 Out-of-frame Inter-chr p13.31 130176 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188172 5 0 Out-of-frame Intra-chr p11.2 130177 ChimerSeq STARFusion Babiceanu et PPP1R16B-IGH@ PPP1R16B chr20 37464814 + IGH@ chr14 106329462 - Exonic hg19 Non-Cancer ERR188403 3 1 Out-of-frame Inter-chr q11.23 32.33 130178 ChimerSeq STARFusion Babiceanu et PPP1R16B-IGHM PPP1R16B chr20 37464814 + IGHM chr14 106329462 - Exonic hg19 Non-Cancer ERR188403 3 1 Out-of-frame Inter-chr q11.23 q32.33 130179 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188306 12 0 Out-of-frame Intra-chr p11.2 130180 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188101 20 0 Out-of-frame Intra-chr p11.2 130181 ChimerSeq STARFusion Babiceanu et CASP16-IGH@ CASP16 chr16 3195992 + IGH@ chr14 107035032 - Exonic hg19 Non-Cancer ERR188101 7 0 Out-of-frame Inter-chr 32.33 130182 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188268 27 0 Out-of-frame Intra-chr p11.2 130183 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188449 11 0 Out-of-frame Intra-chr p11.2 130184 ChimerSeq STARFusion Babiceanu et TIMM23B-PARGP1 TIMM23B chr10 51387763 + PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer ERR188478 14 10 Out-of-frame Intra-chr q11.23 q11.22 130185 ChimerSeq STARFusion Babiceanu et EHMT2-IGH@ EHMT2 chr6 31860827 - IGH@ chr14 106330063 - Exonic hg19 Non-Cancer ERR188478 3 1 Out-of-frame Inter-chr 32.33 130186 ChimerSeq STARFusion Babiceanu et EHMT2-IGHM EHMT2 chr6 31860827 - IGHM chr14 106330063 - Exonic hg19 Non-Cancer ERR188478 3 1 Out-of-frame Inter-chr q32.33 130187 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188215 8 0 Out-of-frame Intra-chr p11.2 130188 ChimerSeq STARFusion Babiceanu et C11orf31-BCAS4 C11orf31 chr11 57509118 + BCAS4 chr20 49457149 + Exonic hg19 Non-Cancer ERR188215 6 1 Out-of-frame Inter-chr q13.13 130189 ChimerSeq STARFusion Babiceanu et IGH@-IQCA1P1 IGH@ chr14 107083260 - IQCA1P1 chr7 150893548 - Exonic hg19 Non-Cancer ERR188180 71 0 Out-of-frame Inter-chr 32.33 130190 ChimerSeq STARFusion Babiceanu et IGH@-IQCA1P1 IGH@ chr14 107062127 - IQCA1P1 chr7 150893543 - Exonic hg19 Non-Cancer ERR188180 68 0 Out-of-frame Inter-chr 32.33 130191 ChimerSeq STARFusion Babiceanu et IGH@-IQCA1P1 IGH@ chr14 107095130 - IQCA1P1 chr7 150893548 - Exonic hg19 Non-Cancer ERR188180 66 0 Out-of-frame Inter-chr 32.33 130192 ChimerSeq STARFusion Babiceanu et IGH@-IQCA1P1 IGH@ chr14 106829598 - IQCA1P1 chr7 150893548 - Exonic hg19 Non-Cancer ERR188180 16 0 Out-of-frame Inter-chr 32.33 130193 ChimerSeq STARFusion Babiceanu et CNOT8-MTX2 CNOT8 chr5 154242955 + MTX2 chr2 177202221 + Exonic hg19 Non-Cancer ERR188441 2 0 Out-of-frame Inter-chr q33.2 q31.1 130194 ChimerSeq STARFusion Babiceanu et HNRNPH1-RPL6 HNRNPH1 chr5 179050038 - RPL6 chr12 112844146 - Exonic hg19 Non-Cancer ERR188441 2 0 Out-of-frame Inter-chr q35.3 q24.13 130195 ChimerSeq STARFusion Babiceanu et MARVELD3-IGH@ MARVELD3 chr16 71668176 + IGH@ chr14 106330071 - Exonic hg19 Non-Cancer ERR188082 35 0 Out-of-frame Inter-chr q22.2 32.33 130196 ChimerSeq STARFusion Babiceanu et MARVELD3-IGH@ MARVELD3 chr16 71668176 + IGH@ chr14 106330472 - Exonic hg19 Non-Cancer ERR188082 35 0 Out-of-frame Inter-chr q22.2 32.33 130197 ChimerSeq STARFusion Babiceanu et MARVELD3-IGHJ4 MARVELD3 chr16 71668176 + IGHJ4 chr14 106330472 - Exonic hg19 Non-Cancer ERR188082 35 0 Out-of-frame Inter-chr q22.2 130198 ChimerSeq STARFusion Babiceanu et MARVELD3-IGHM MARVELD3 chr16 71668176 + IGHM chr14 106330472 - Exonic hg19 Non-Cancer ERR188082 34 0 Out-of-frame Inter-chr q22.2 q32.33 130199 ChimerSeq STARFusion Babiceanu et MARVELD3-IGHM MARVELD3 chr16 71668176 + IGHM chr14 106330071 - Exonic hg19 Non-Cancer ERR188082 16 0 Out-of-frame Inter-chr q22.2 q32.33 130200 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188118 9 0 Out-of-frame Intra-chr p11.2 130201 ChimerSeq STARFusion Babiceanu et IGH@-CD47 IGH@ chr14 106805207 - CD47 chr3 107809819 - Exonic hg19 Non-Cancer ERR188118 4 0 Out-of-frame Inter-chr 32.33 q13.12 130202 ChimerSeq STARFusion Babiceanu et IGH@-CD47 IGH@ chr14 106877617 - CD47 chr3 107809819 - Exonic hg19 Non-Cancer ERR188118 4 0 Out-of-frame Inter-chr 32.33 q13.12 130203 ChimerSeq STARFusion Babiceanu et IL3RA-CSF2RA IL3RA chrY 1410722 + CSF2RA chrY 1357412 + Exonic hg19 Non-Cancer ERR188335 7 2 Out-of-frame Intra-chr p22.33 p22.33 130204 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188335 7 0 Out-of-frame Intra-chr p11.2 130205 ChimerSeq STARFusion Babiceanu et IL3RA-CSF2RA IL3RA chrX 1460722 + CSF2RA chrX 1407412 + Exonic hg19 Non-Cancer ERR188335 2 1 3'UTR-3'UTR Intra-chr p22.33 p22.33 130206 ChimerSeq STARFusion Babiceanu et IL3RA-CSF2RA IL3RA chrX 1460722 + CSF2RA chrY 1357412 + Exonic hg19 Non-Cancer ERR188335 2 1 3'UTR-CDS Inter-chr p22.33 p22.33 130207 ChimerSeq STARFusion Babiceanu et IL3RA-CSF2RA IL3RA chrY 1410722 + CSF2RA chrX 1407412 + Exonic hg19 Non-Cancer ERR188335 2 1 Out-of-frame Inter-chr p22.33 p22.33 130208 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188379 4 0 Out-of-frame Intra-chr p11.2 130209 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188380 6 0 Out-of-frame Intra-chr p11.2 130210 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188391 8 0 Out-of-frame Intra-chr p11.2 130211 ChimerSeq STARFusion Babiceanu et E2F4-RPL14 E2F4 chr16 67229785 + RPL14 chr3 40503542 + Exonic hg19 Non-Cancer ERR188391 3 1 Out-of-frame Inter-chr q22.1 Transcription factor p22.1 130212 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188182 21 0 Out-of-frame Intra-chr p11.2 130213 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188108 10 0 Out-of-frame Intra-chr p11.2 130214 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188184 23 0 Out-of-frame Intra-chr p11.2 130215 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188344 19 0 Out-of-frame Intra-chr p11.2 130216 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188109 12 0 Out-of-frame Intra-chr p11.2 130217 ChimerSeq STARFusion Babiceanu et IGH@-NOC2L IGH@ chr14 107169929 - NOC2L chr1 880146 - Exonic hg19 Non-Cancer ERR188109 6 0 Out-of-frame Inter-chr 32.33 p36.33 130218 ChimerSeq STARFusion Babiceanu et IGH@-NOC2L IGH@ chr14 107078371 - NOC2L chr1 880146 - Exonic hg19 Non-Cancer ERR188109 5 0 Out-of-frame Inter-chr 32.33 p36.33 130219 ChimerSeq STARFusion Babiceanu et NOP58-FAM129C NOP58 chr2 203162629 + FAM129C chr19 17664122 + Exonic hg19 Non-Cancer ERR188433 2 0 Out-of-frame Inter-chr q33.1 p13.11 130220 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188402 4 0 Out-of-frame Intra-chr p11.2 130221 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188258 14 0 Out-of-frame Intra-chr p11.2 130222 ChimerSeq STARFusion Babiceanu et PKM-PKLR PKM chr15 72500964 - PKLR chr1 155264178 - Exonic hg19 Non-Cancer ERR188258 5 0 Out-of-frame Inter-chr q23 q22 130223 ChimerSeq STARFusion Babiceanu et BCAS4-IGH@ BCAS4 chr20 49457268 + IGH@ chr14 106321323 - Exonic hg19 Non-Cancer ERR188258 3 3 Out-of-frame Inter-chr q13.13 32.33 130224 ChimerSeq STARFusion Babiceanu et BCAS4-IGHM BCAS4 chr20 49457268 + IGHM chr14 106321323 - Exonic hg19 Non-Cancer ERR188258 3 1 Out-of-frame Inter-chr q13.13 q32.33 130225 ChimerSeq STARFusion Babiceanu et IGH@-TENM2 IGH@ chr14 107062132 - TENM2 chr5 167674547 + Exonic hg19 Non-Cancer ERR188250 22 0 Out-of-frame Inter-chr 32.33 q34 130226 ChimerSeq STARFusion Babiceanu et IGH@-TENM2 IGH@ chr14 107083260 - TENM2 chr5 167674547 + Exonic hg19 Non-Cancer ERR188250 19 0 Out-of-frame Inter-chr 32.33 q34 130227 ChimerSeq STARFusion Babiceanu et IGH@-TENM2 IGH@ chr14 107095130 - TENM2 chr5 167674547 + Exonic hg19 Non-Cancer ERR188250 19 0 Out-of-frame Inter-chr 32.33 q34 130228 ChimerSeq STARFusion Babiceanu et IGH@-TENM2 IGH@ chr14 106805213 - TENM2 chr5 167674547 + Exonic hg19 Non-Cancer ERR188250 16 0 Out-of-frame Inter-chr 32.33 q34 130229 ChimerSeq STARFusion Babiceanu et IGH@-TENM2 IGH@ chr14 106829598 - TENM2 chr5 167674547 + Exonic hg19 Non-Cancer ERR188250 16 0 Out-of-frame Inter-chr 32.33 q34 130230 ChimerSeq STARFusion Babiceanu et IGH@-TENM2 IGH@ chr14 106478114 - TENM2 chr5 167674547 + Exonic hg19 Non-Cancer ERR188250 15 0 Out-of-frame Inter-chr 32.33 q34 130231 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188289 11 0 Out-of-frame Intra-chr p11.2 130232 ChimerSeq STARFusion Babiceanu et RPL17P50-P4HA1 RPL17P50 chr10 74765901 - P4HA1 chr10 74767271 - Exonic hg19 Non-Cancer ERR188289 4 0 Out-of-frame Intra-chr q22.1 q22.1 130233 ChimerSeq STARFusion Babiceanu et CCL22-RN7SL1 CCL22 chr16 57399560 + RN7SL1 chr14 50053367 + Exonic hg19 Non-Cancer ERR188289 3 2 Out-of-frame Inter-chr q21 q21.3 130234 ChimerSeq STARFusion Babiceanu et TAPBP-RN7SL2 TAPBP chr6 33268335 - RN7SL2 chr14 50329532 - Exonic hg19 Non-Cancer ERR188289 3 1 Out-of-frame Inter-chr q21.3 130235 ChimerSeq STARFusion Babiceanu et U3-IGL@ U3 chr3 64057481 - IGL@ chr22 23247171 + Exonic hg19 Non-Cancer ERR188308 12 0 Out-of-frame Inter-chr q11.22 130236 ChimerSeq STARFusion Babiceanu et U3-IGLC3 U3 chr3 64057481 - IGLC3 chr22 23247171 + Exonic hg19 Non-Cancer ERR188308 12 0 Out-of-frame Inter-chr q11.22 130237 ChimerSeq STARFusion Babiceanu et U3-IGLJ3 U3 chr3 64057481 - IGLJ3 chr22 23247171 + Exonic hg19 Non-Cancer ERR188308 12 0 Out-of-frame Inter-chr q11.22 130238 ChimerSeq STARFusion Babiceanu et U3-IGL@ U3 chr3 64057481 - IGL@ chr22 23241801 + Exonic hg19 Non-Cancer ERR188308 10 0 Out-of-frame Inter-chr q11.22 130239 ChimerSeq STARFusion Babiceanu et U3-IGLC3 U3 chr3 64057481 - IGLC3 chr22 23241801 + Exonic hg19 Non-Cancer ERR188308 9 0 Out-of-frame Inter-chr q11.22 130240 ChimerSeq STARFusion Babiceanu et HNRNPA0-IGH@ HNRNPA0 chr5 137089001 - IGH@ chr14 106331651 - Exonic hg19 Non-Cancer ERR188247 3 1 Out-of-frame Inter-chr q31.2 32.33 130241 ChimerSeq STARFusion Babiceanu et HNRNPA0-IGH@ HNRNPA0 chr5 137089008 - IGH@ chr14 106330065 - Exonic hg19 Non-Cancer ERR188247 3 1 Out-of-frame Inter-chr q31.2 32.33 130242 ChimerSeq STARFusion Babiceanu et HNRNPA0-IGH@ HNRNPA0 chr5 137089008 - IGH@ chr14 106330466 - Exonic hg19 Non-Cancer ERR188247 3 1 Out-of-frame Inter-chr q31.2 32.33 130243 ChimerSeq STARFusion Babiceanu et HNRNPA0-IGHM HNRNPA0 chr5 137089001 - IGHM chr14 106331651 - Exonic hg19 Non-Cancer ERR188247 3 1 Out-of-frame Inter-chr q31.2 q32.33 130244 ChimerSeq STARFusion Babiceanu et HNRNPA0-IGHM HNRNPA0 chr5 137089008 - IGHM chr14 106330065 - Exonic hg19 Non-Cancer ERR188247 3 1 Out-of-frame Inter-chr q31.2 q32.33 130245 ChimerSeq STARFusion Babiceanu et HNRNPA0-IGHM HNRNPA0 chr5 137089008 - IGHM chr14 106330466 - Exonic hg19 Non-Cancer ERR188247 3 1 Out-of-frame Inter-chr q31.2 q32.33 130246 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188346 22 0 Out-of-frame Intra-chr p11.2 130247 ChimerSeq STARFusion Babiceanu et TAPBP-RN7SL5P TAPBP chr6 33268340 - RN7SL5P chr9 9442090 + Exonic hg19 Non-Cancer ERR188346 3 6 Out-of-frame Inter-chr p23 130248 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188420 6 0 Out-of-frame Intra-chr p11.2 130249 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188294 16 0 Out-of-frame Intra-chr p11.2 130250 ChimerSeq STARFusion Babiceanu et LINC00176-ARL14EP LINC00176 chr20 62669614 + ARL14EP chr11 30358189 + Exonic hg19 Non-Cancer ERR188294 3 0 Out-of-frame Inter-chr p14.1 130251 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188151 12 0 Out-of-frame Intra-chr p11.2 130252 ChimerSeq STARFusion Babiceanu et WEE1-NCL WEE1 chr11 9595608 + NCL chr2 232325277 - Exonic hg19 Non-Cancer ERR188413 5 0 Out-of-frame Inter-chr p15.4 q37.1 130253 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188457 10 0 Out-of-frame Intra-chr p11.2 130254 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188259 15 0 Out-of-frame Intra-chr p11.2 130255 ChimerSeq STARFusion Babiceanu et E2F4-RPL14 E2F4 chr16 67229791 + RPL14 chr3 40503548 + Exonic hg19 Non-Cancer ERR188415 4 1 Out-of-frame Inter-chr q22.1 Transcription factor p22.1 130256 ChimerSeq STARFusion Babiceanu et IGH@-IGL@ IGH@ chr14 106208229 - IGL@ chr22 23237690 + Exonic hg19 Non-Cancer ERR188311 4 9 Out-of-frame Inter-chr 32.33 q11.22 130257 ChimerSeq STARFusion Babiceanu et EEF1A1-RPS4X EEF1A1 chr6 74227751 - RPS4X chrX 71494941 - Exonic hg19 Non-Cancer ERR188311 4 5 Out-of-frame Inter-chr q13 Tumor suppressor gene q13.1 130258 ChimerSeq STARFusion Babiceanu et IGH@-IGL@ IGH@ chr14 106091232 - IGL@ chr22 23237690 + Exonic hg19 Non-Cancer ERR188311 3 9 Out-of-frame Inter-chr 32.33 q11.22 130259 ChimerSeq STARFusion Babiceanu et AP1S3-GIGYF2 AP1S3 chr2 224702165 - GIGYF2 chr2 233671201 + Exonic hg19 Non-Cancer ERR188311 2 0 Out-of-frame Intra-chr q36.1 q37.1 130260 ChimerSeq STARFusion Babiceanu et ENO1-WHSC1 ENO1 chr1 8938639 - WHSC1 chr4 1976590 + Exonic hg19 Non-Cancer ERR188311 2 0 Out-of-frame Inter-chr p36.23 Oncogene 130261 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188311 2 0 Out-of-frame Intra-chr p11.2 130262 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188095 13 0 Out-of-frame Intra-chr p11.2 130263 ChimerSeq STARFusion Babiceanu et CCL22-RN7SL1 CCL22 chr16 57399560 + RN7SL1 chr14 50053367 + Exonic hg19 Non-Cancer ERR188140 16 20 Out-of-frame Inter-chr q21 q21.3 130264 ChimerSeq STARFusion Babiceanu et CCL22-RN7SL1 CCL22 chr16 57399568 + RN7SL1 chr14 50053365 + Exonic hg19 Non-Cancer ERR188140 3 20 Out-of-frame Inter-chr q21 q21.3 130265 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188059 8 0 Out-of-frame Intra-chr p11.2 130266 ChimerSeq STARFusion Babiceanu et HMGB3P30-NCL HMGB3P30 chrX 111933727 + NCL chr2 232325273 - Exonic hg19 Non-Cancer ERR188114 5 0 Out-of-frame Inter-chr q23 q37.1 130267 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188397 12 0 Out-of-frame Intra-chr p11.2 130268 ChimerSeq STARFusion Babiceanu et CCL22-RN7SL1 CCL22 chr16 57399560 + RN7SL1 chr14 50053367 + Exonic hg19 Non-Cancer ERR188272 3 3 Out-of-frame Inter-chr q21 q21.3 130269 ChimerSeq STARFusion Babiceanu et ELK1-FLI1 ELK1 chrX 47500631 - FLI1 chr11 128680500 + Exonic hg19 Non-Cancer ERR188262 3 0 Out-of-frame Inter-chr p11.23 Transcription factor q24.3 Oncogene Transcription factor 130270 ChimerSeq STARFusion Babiceanu et PDE6B-PPP2R2D PDE6B chr4 619882 + PPP2R2D chr10 133753533 + Exonic hg19 Non-Cancer ERR188310 4 0 Out-of-frame Inter-chr p16.3 q26.3 130271 ChimerSeq STARFusion Babiceanu et E2F4-RPL14 E2F4 chr16 67229785 + RPL14 chr3 40503545 + Exonic hg19 Non-Cancer ERR188192 3 1 Out-of-frame Inter-chr q22.1 Transcription factor p22.1 130272 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188145 7 0 Out-of-frame Intra-chr p11.2 130273 ChimerSeq STARFusion Babiceanu et VIM-KRT81 VIM chr10 17271729 + KRT81 chr12 52684890 - Exonic hg19 Non-Cancer ERR188145 7 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130274 ChimerSeq STARFusion Babiceanu et VIM-KRT86 VIM chr10 17271729 + KRT86 chr12 52696060 + Exonic hg19 Non-Cancer ERR188145 7 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130275 ChimerSeq STARFusion Babiceanu et IGL@-HCN3 IGL@ chr22 22677323 + HCN3 chr1 155257676 + Exonic hg19 Non-Cancer ERR188257 5 0 Out-of-frame Inter-chr q11.22 q22 130276 ChimerSeq STARFusion Babiceanu et BMS1P20-HCN3 BMS1P20 chr22 22677323 + HCN3 chr1 155257676 + Exonic hg19 Non-Cancer ERR188257 4 0 Out-of-frame Inter-chr q22 130277 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188072 14 0 Out-of-frame Intra-chr p11.2 130278 ChimerSeq STARFusion Babiceanu et VIM-KRT81 VIM chr10 17271726 + KRT81 chr12 52684893 - Exonic hg19 Non-Cancer ERR188072 4 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130279 ChimerSeq STARFusion Babiceanu et VIM-KRT86 VIM chr10 17271726 + KRT86 chr12 52696057 + Exonic hg19 Non-Cancer ERR188072 4 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130280 ChimerSeq STARFusion Babiceanu et SETD2-CCDC12 SETD2 chr3 47205344 - CCDC12 chr3 46967025 - Exonic hg19 Non-Cancer ERR188474 15 0 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 KB Seq+ 130281 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188128 16 0 Out-of-frame Intra-chr p11.2 130282 ChimerSeq STARFusion Babiceanu et MAST2-IGL@ MAST2 chr1 46496367 + IGL@ chr22 23241798 + Exonic hg19 Non-Cancer ERR188291 32 0 Out-of-frame Inter-chr p34.1 AGC:MAST q11.22 130283 ChimerSeq STARFusion Babiceanu et MAST2-IGLC2 MAST2 chr1 46496367 + IGLC2 chr22 23241798 + Exonic hg19 Non-Cancer ERR188291 32 0 Out-of-frame Inter-chr p34.1 AGC:MAST q11.22 130284 ChimerSeq STARFusion Babiceanu et MAST2-IGLJ2 MAST2 chr1 46496367 + IGLJ2 chr22 23241798 + Exonic hg19 Non-Cancer ERR188291 32 0 Out-of-frame Inter-chr p34.1 AGC:MAST q11.22 130285 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188291 8 0 Out-of-frame Intra-chr p11.2 130286 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188064 3 0 Out-of-frame Intra-chr p11.2 130287 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188288 10 0 Out-of-frame Intra-chr p11.2 130288 ChimerSeq STARFusion Babiceanu et RPL17P50-P4HA1 RPL17P50 chr10 74765901 - P4HA1 chr10 74767273 - Exonic hg19 Non-Cancer ERR188288 3 0 Out-of-frame Intra-chr q22.1 q22.1 130289 ChimerSeq STARFusion Babiceanu et IPPK-OGN IPPK chr9 95410341 - OGN chr9 95165683 - Exonic hg19 Non-Cancer ERR188288 2 1 Out-of-frame Intra-chr q22.31 q22.31 130290 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188427 42 0 Out-of-frame Intra-chr p11.2 130291 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188465 7 0 Out-of-frame Intra-chr p11.2 130292 ChimerSeq STARFusion Babiceanu et PLD2-PSMB6 PLD2 chr17 4724632 + PSMB6 chr17 4701624 + Exonic hg19 Non-Cancer ERR188465 5 1 Out-of-frame Intra-chr p13.2 p13.2 130293 ChimerSeq STARFusion Babiceanu et RPL3-EEF1A1 RPL3 chr22 39713565 - EEF1A1 chr6 74228185 - Exonic hg19 Non-Cancer ERR188465 3 0 Out-of-frame Inter-chr q13.1 q13 Tumor suppressor gene 130294 ChimerSeq STARFusion Babiceanu et NUMB-IGH@ NUMB chr14 73742868 - IGH@ chr14 106330066 - Exonic hg19 Non-Cancer ERR188156 3 0 Out-of-frame Intra-chr q24.3 Tumor suppressor gene 32.33 130295 ChimerSeq STARFusion Babiceanu et NUMB-IGHJ5 NUMB chr14 73742868 - IGHJ5 chr14 106330066 - Exonic hg19 Non-Cancer ERR188156 3 0 Out-of-frame Intra-chr q24.3 Tumor suppressor gene 130296 ChimerSeq STARFusion Babiceanu et NUMB-IGHM NUMB chr14 73742868 - IGHM chr14 106330066 - Exonic hg19 Non-Cancer ERR188156 3 0 Out-of-frame Intra-chr q24.3 Tumor suppressor gene q32.33 130297 ChimerSeq STARFusion Babiceanu et VIM-KRT81 VIM chr10 17271726 + KRT81 chr12 52684893 - Exonic hg19 Non-Cancer ERR188325 6 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130298 ChimerSeq STARFusion Babiceanu et VIM-KRT86 VIM chr10 17271726 + KRT86 chr12 52696057 + Exonic hg19 Non-Cancer ERR188325 6 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130299 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188176 15 0 Out-of-frame Intra-chr p11.2 130300 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188203 3 0 Out-of-frame Intra-chr p11.2 130301 ChimerSeq STARFusion Babiceanu et RPL17P50-P4HA1 RPL17P50 chr10 74765901 - P4HA1 chr10 74767271 - Exonic hg19 Non-Cancer ERR188203 3 0 Out-of-frame Intra-chr q22.1 q22.1 130302 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188100 4 0 Out-of-frame Intra-chr p11.2 130303 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188471 15 0 Out-of-frame Intra-chr p11.2 130304 ChimerSeq STARFusion Babiceanu et VTA1-IGL@ VTA1 chr6 142543227 + IGL@ chr22 23247168 + Exonic hg19 Non-Cancer ERR188198 13 0 Out-of-frame Inter-chr q24.1 q11.22 130305 ChimerSeq STARFusion Babiceanu et VTA1-IGLC3 VTA1 chr6 142543227 + IGLC3 chr22 23247168 + Exonic hg19 Non-Cancer ERR188198 13 0 Out-of-frame Inter-chr q24.1 q11.22 130306 ChimerSeq STARFusion Babiceanu et VTA1-IGLJ3 VTA1 chr6 142543227 + IGLJ3 chr22 23247168 + Exonic hg19 Non-Cancer ERR188198 13 0 Out-of-frame Inter-chr q24.1 q11.22 130307 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188198 9 0 Out-of-frame Intra-chr p11.2 130308 ChimerSeq STARFusion Babiceanu et IGL@-MAP3K4 IGL@ chr22 22730859 + MAP3K4 chr6 161522684 + Exonic hg19 Non-Cancer ERR188356 7 0 Out-of-frame Inter-chr q11.22 q26 STE:STE11 Tumor suppressor gene 130309 ChimerSeq STARFusion Babiceanu et NARG2-IGL@ NARG2 chr15 60712749 - IGL@ chr22 23247175 + Exonic hg19 Non-Cancer ERR188248 24 0 Out-of-frame Inter-chr q11.22 130310 ChimerSeq STARFusion Babiceanu et NARG2-IGLC3 NARG2 chr15 60712749 - IGLC3 chr22 23247175 + Exonic hg19 Non-Cancer ERR188248 24 0 Out-of-frame Inter-chr q11.22 130311 ChimerSeq STARFusion Babiceanu et NARG2-IGLJ3 NARG2 chr15 60712749 - IGLJ3 chr22 23247175 + Exonic hg19 Non-Cancer ERR188248 24 0 Out-of-frame Inter-chr q11.22 130312 ChimerSeq STARFusion Babiceanu et NARG2-IGL@ NARG2 chr15 60712749 - IGL@ chr22 23241805 + Exonic hg19 Non-Cancer ERR188248 4 0 Out-of-frame Inter-chr q11.22 130313 ChimerSeq STARFusion Babiceanu et NARG2-IGLC3 NARG2 chr15 60712749 - IGLC3 chr22 23241805 + Exonic hg19 Non-Cancer ERR188248 4 0 Out-of-frame Inter-chr q11.22 130314 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188193 7 0 Out-of-frame Intra-chr p11.2 130315 ChimerSeq STARFusion Babiceanu et PTCHD2-IGL@ PTCHD2 chr1 11589962 + IGL@ chr22 23241811 + Exonic hg19 Non-Cancer ERR188365 14 0 Out-of-frame Inter-chr q11.22 130316 ChimerSeq STARFusion Babiceanu et PTCHD2-IGL@ PTCHD2 chr1 11589962 + IGL@ chr22 23247181 + Exonic hg19 Non-Cancer ERR188365 14 0 Out-of-frame Inter-chr q11.22 130317 ChimerSeq STARFusion Babiceanu et PTCHD2-IGLC2 PTCHD2 chr1 11589962 + IGLC2 chr22 23241811 + Exonic hg19 Non-Cancer ERR188365 14 0 Out-of-frame Inter-chr q11.22 130318 ChimerSeq STARFusion Babiceanu et PTCHD2-IGLJ2 PTCHD2 chr1 11589962 + IGLJ2 chr22 23241811 + Exonic hg19 Non-Cancer ERR188365 14 0 Out-of-frame Inter-chr q11.22 130319 ChimerSeq STARFusion Babiceanu et IGH@-PPP6R3 IGH@ chr14 106691820 - PPP6R3 chr11 68355369 + Exonic hg19 Non-Cancer ERR188365 10 0 Out-of-frame Inter-chr 32.33 q13.2 130320 ChimerSeq STARFusion Babiceanu et IGH@-PPP6R3 IGH@ chr14 106573380 - PPP6R3 chr11 68355369 + Exonic hg19 Non-Cancer ERR188365 9 0 Out-of-frame Inter-chr 32.33 q13.2 130321 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188365 9 0 Out-of-frame Intra-chr p11.2 130322 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188214 19 0 Out-of-frame Intra-chr p11.2 130323 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188418 9 0 Out-of-frame Intra-chr p11.2 130324 ChimerSeq STARFusion Babiceanu et LONP1-ACTB LONP1 chr19 5694478 - ACTB chr7 5568846 - Exonic hg19 Non-Cancer ERR188418 3 1 Out-of-frame Inter-chr p13.3 p22.1 130325 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188238 9 0 Out-of-frame Intra-chr p11.2 130326 ChimerSeq STARFusion Babiceanu et GANC-BNIP3P1 GANC chr15 42606372 + BNIP3P1 chr14 28734115 + Exonic hg19 Non-Cancer ERR188075 4 1 Out-of-frame Inter-chr q15.1 q12 130327 ChimerSeq STARFusion Babiceanu et E2F4-RPL14 E2F4 chr16 67229791 + RPL14 chr3 40503548 + Exonic hg19 Non-Cancer ERR188345 3 2 Out-of-frame Inter-chr q22.1 Transcription factor p22.1 130328 ChimerSeq STARFusion Babiceanu et IGJ-PSMD5 IGJ chr4 71521677 - PSMD5 chr9 123586599 - Exonic hg19 Non-Cancer ERR188345 3 0 Out-of-frame Inter-chr q33.2 130329 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188315 8 0 Out-of-frame Intra-chr p11.2 130330 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188129 5 0 Out-of-frame Intra-chr p11.2 130331 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188234 39 0 Out-of-frame Intra-chr p11.2 130332 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188136 4 0 Out-of-frame Intra-chr p11.2 130333 ChimerSeq STARFusion Babiceanu et PDE6B-PPP2R2D PDE6B chr4 619882 + PPP2R2D chr10 133747960 + Exonic hg19 Non-Cancer ERR188412 6 0 Out-of-frame Inter-chr p16.3 q26.3 130334 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188412 4 0 Out-of-frame Intra-chr p11.2 130335 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188261 26 0 Out-of-frame Intra-chr p11.2 130336 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188039 6 0 Out-of-frame Intra-chr p11.2 130337 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188352 12 0 Out-of-frame Intra-chr p11.2 130338 ChimerSeq STARFusion Babiceanu et TMEM9B-HCLS1 TMEM9B chr11 8985911 - HCLS1 chr3 121351327 - Exonic hg19 Non-Cancer ERR188352 9 0 Out-of-frame Inter-chr p15.4 q13.33 130339 ChimerSeq STARFusion Babiceanu et EHBP1L1-IGH@ EHBP1L1 chr11 65351843 + IGH@ chr14 106330057 - Exonic hg19 Non-Cancer ERR188352 6 0 Out-of-frame Inter-chr q13.1 32.33 130340 ChimerSeq STARFusion Babiceanu et EHBP1L1-IGHJ5 EHBP1L1 chr11 65351843 + IGHJ5 chr14 106330057 - Exonic hg19 Non-Cancer ERR188352 6 0 Out-of-frame Inter-chr q13.1 130341 ChimerSeq STARFusion Babiceanu et EHBP1L1-IGHM EHBP1L1 chr11 65351843 + IGHM chr14 106330057 - Exonic hg19 Non-Cancer ERR188352 5 0 Out-of-frame Inter-chr q13.1 q32.33 130342 ChimerSeq STARFusion Babiceanu et ZNF618-PPP4C ZNF618 chr9 116638587 + PPP4C chr16 30087353 + Exonic hg19 Non-Cancer ERR188352 3 0 Out-of-frame Inter-chr q32 Transcription factor p11.2 130343 ChimerSeq STARFusion Babiceanu et BRI3BP-UBC BRI3BP chr12 125478549 + UBC chr12 125398320 - Exonic hg19 Non-Cancer ERR188352 2 1 CDS-5'UTR Intra-chr q24.31 q24.31 130344 ChimerSeq STARFusion Babiceanu et IGH@-ACTB IGH@ chr14 107034728 - ACTB chr7 5569340 - Exonic hg19 Non-Cancer ERR188299 34 7 Out-of-frame Inter-chr 32.33 p22.1 130345 ChimerSeq STARFusion Babiceanu et RNF6P1-IGH@ RNF6P1 chr21 40748707 - IGH@ chr14 106330467 - Exonic hg19 Non-Cancer ERR188299 4 0 Out-of-frame Inter-chr q22.2 32.33 130346 ChimerSeq STARFusion Babiceanu et RNF6P1-IGHJ4 RNF6P1 chr21 40748707 - IGHJ4 chr14 106330467 - Exonic hg19 Non-Cancer ERR188299 4 0 Out-of-frame Inter-chr q22.2 130347 ChimerSeq STARFusion Babiceanu et RNF6P1-IGHM RNF6P1 chr21 40748707 - IGHM chr14 106330467 - Exonic hg19 Non-Cancer ERR188299 4 0 Out-of-frame Inter-chr q22.2 q32.33 130348 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188165 7 0 Out-of-frame Intra-chr p11.2 130349 ChimerSeq STARFusion Babiceanu et BDH1-IQCG BDH1 chr3 197282652 - IQCG chr3 197619630 - Exonic hg19 Non-Cancer ERR188165 3 0 5'UTR-CDS Intra-chr q29 130350 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188096 13 0 Out-of-frame Intra-chr p11.2 130351 ChimerSeq STARFusion Babiceanu et CCL22-RN7SL1 CCL22 chr16 57399560 + RN7SL1 chr14 50053367 + Exonic hg19 Non-Cancer ERR188347 7 6 Out-of-frame Inter-chr q21 q21.3 130352 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188347 4 0 Out-of-frame Intra-chr p11.2 130353 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188062 6 0 Out-of-frame Intra-chr p11.2 130354 ChimerSeq STARFusion Babiceanu et HSPBP1-ZSWIM6 HSPBP1 chr19 55790899 - ZSWIM6 chr5 60628541 + Exonic hg19 Non-Cancer ERR188062 3 0 Out-of-frame Inter-chr q13.42 q12.1 130355 ChimerSeq STARFusion Babiceanu et VIM-KRT81 VIM chr10 17271729 + KRT81 chr12 52684890 - Exonic hg19 Non-Cancer ERR188350 3 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130356 ChimerSeq STARFusion Babiceanu et VIM-KRT86 VIM chr10 17271729 + KRT86 chr12 52696060 + Exonic hg19 Non-Cancer ERR188350 3 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130357 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188091 14 0 Out-of-frame Intra-chr p11.2 130358 ChimerSeq STARFusion Babiceanu et TIMM23B-PARGP1 TIMM23B chr10 51387763 + PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer ERR188219 12 17 Out-of-frame Intra-chr q11.23 q11.22 130359 ChimerSeq STARFusion Babiceanu et RPL17P50-P4HA1 RPL17P50 chr10 74765901 - P4HA1 chr10 74767273 - Exonic hg19 Non-Cancer ERR188056 8 0 Out-of-frame Intra-chr q22.1 q22.1 130360 ChimerSeq STARFusion Babiceanu et HMGB3P30-NCL HMGB3P30 chrX 111933723 + NCL chr2 232325277 - Exonic hg19 Non-Cancer ERR188056 4 0 Out-of-frame Inter-chr q23 q37.1 130361 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188375 24 0 Out-of-frame Intra-chr p11.2 130362 ChimerSeq STARFusion Babiceanu et TMEM9B-HCLS1 TMEM9B chr11 8985916 - HCLS1 chr3 121351332 - Exonic hg19 Non-Cancer ERR188375 3 0 Out-of-frame Inter-chr p15.4 q13.33 130363 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188260 9 0 Out-of-frame Intra-chr p11.2 130364 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188444 11 0 Out-of-frame Intra-chr p11.2 130365 ChimerSeq STARFusion Babiceanu et C11orf31-BCAS4 C11orf31 chr11 57509118 + BCAS4 chr20 49457149 + Exonic hg19 Non-Cancer ERR188444 4 1 Out-of-frame Inter-chr q13.13 130366 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188251 11 0 Out-of-frame Intra-chr p11.2 130367 ChimerSeq STARFusion Babiceanu et IGL@-KDM2B IGL@ chr22 22385869 + KDM2B chr12 121958867 - Exonic hg19 Non-Cancer ERR188251 4 1 Out-of-frame Inter-chr q11.22 q24.31 Transcription factor 130368 ChimerSeq STARFusion Babiceanu et IFI35-RPL27 IFI35 chr17 41158985 + RPL27 chr17 41151950 + Exonic hg19 Non-Cancer ERR188094 2 0 In-Frame Intra-chr q21.31 q21.31 130369 ChimerSeq STARFusion Babiceanu et IVD-IGH@ IVD chr15 40705286 + IGH@ chr14 106236486 - Exonic hg19 Non-Cancer ERR188094 2 0 Out-of-frame Inter-chr q15.1 32.33 130370 ChimerSeq STARFusion Babiceanu et IVD-IGH@ IVD chr15 40705286 + IGH@ chr14 106236674 - Exonic hg19 Non-Cancer ERR188094 2 0 Out-of-frame Inter-chr q15.1 32.33 130371 ChimerSeq STARFusion Babiceanu et IVD-IGH@ IVD chr15 40705286 + IGH@ chr14 106236862 - Exonic hg19 Non-Cancer ERR188094 2 0 Out-of-frame Inter-chr q15.1 32.33 130372 ChimerSeq STARFusion Babiceanu et IVD-IGHG3 IVD chr15 40705286 + IGHG3 chr14 106236486 - Exonic hg19 Non-Cancer ERR188094 2 0 Out-of-frame Inter-chr q15.1 130373 ChimerSeq STARFusion Babiceanu et IVD-IGHG3 IVD chr15 40705286 + IGHG3 chr14 106236674 - Exonic hg19 Non-Cancer ERR188094 2 0 Out-of-frame Inter-chr q15.1 130374 ChimerSeq STARFusion Babiceanu et IVD-IGHG3 IVD chr15 40705286 + IGHG3 chr14 106236862 - Exonic hg19 Non-Cancer ERR188094 2 0 Out-of-frame Inter-chr q15.1 130375 ChimerSeq STARFusion Babiceanu et CPSF6-ZHX1 CPSF6 chr12 69656342 + ZHX1 chr8 124262560 - Exonic hg19 Non-Cancer ERR188034 2 0 3'UTR-3'UTR Inter-chr q15 q24.13 Transcription factor 130376 ChimerSeq STARFusion Babiceanu et VIM-KRT81 VIM chr10 17271726 + KRT81 chr12 52684893 - Exonic hg19 Non-Cancer ERR188461 8 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130377 ChimerSeq STARFusion Babiceanu et VIM-KRT86 VIM chr10 17271726 + KRT86 chr12 52696057 + Exonic hg19 Non-Cancer ERR188461 8 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130378 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188461 5 0 Out-of-frame Intra-chr p11.2 130379 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188092 6 0 Out-of-frame Intra-chr p11.2 130380 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188083 14 0 Out-of-frame Intra-chr p11.2 130381 ChimerSeq STARFusion Babiceanu et IGH@-SP110 IGH@ chr14 106641573 - SP110 chr2 231035386 - Exonic hg19 Non-Cancer ERR188083 3 0 Out-of-frame Inter-chr 32.33 q37.1 Transcription factor 130382 ChimerSeq STARFusion Babiceanu et IGL@-SNED1 IGL@ chr22 23101692 + SNED1 chr2 242003407 + Exonic hg19 Non-Cancer ERR188083 3 0 Out-of-frame Inter-chr q11.22 q37.3 130383 ChimerSeq STARFusion Babiceanu et ZNF444-IL24 ZNF444 chr19 56669222 + IL24 chr1 207077073 + Exonic hg19 Non-Cancer ERR188083 3 0 Out-of-frame Inter-chr q13.43 Transcription factor q32.1 Tumor suppressor gene 130384 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188363 17 0 Out-of-frame Intra-chr p11.2 130385 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188211 26 0 Out-of-frame Intra-chr p11.2 130386 ChimerSeq STARFusion Babiceanu et TMEM9B-HCLS1 TMEM9B chr11 8985911 - HCLS1 chr3 121351321 - Exonic hg19 Non-Cancer ERR188211 3 0 Out-of-frame Inter-chr p15.4 q13.33 130387 ChimerSeq STARFusion Babiceanu et TFG-GPR128 TFG chr3 100438902 + GPR128 chr3 100348442 + Exonic hg19 Non-Cancer ERR188469 60 45 In-Frame Intra-chr q12.2 130388 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188469 14 0 Out-of-frame Intra-chr p11.2 130389 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188153 11 0 Out-of-frame Intra-chr p11.2 130390 ChimerSeq STARFusion Babiceanu et CCNF-ABCA17P CCNF chr16 2483068 + ABCA17P chr16 2474579 + Exonic hg19 Non-Cancer ERR188153 2 4 CDS-5'UTR Intra-chr p13.3 p13.3 130391 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188382 5 0 Out-of-frame Intra-chr p11.2 130392 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188055 16 0 Out-of-frame Intra-chr p11.2 130393 ChimerSeq STARFusion Babiceanu et VIM-KRT81 VIM chr10 17271726 + KRT81 chr12 52684893 - Exonic hg19 Non-Cancer ERR188161 7 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130394 ChimerSeq STARFusion Babiceanu et VIM-KRT86 VIM chr10 17271726 + KRT86 chr12 52696057 + Exonic hg19 Non-Cancer ERR188161 7 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130395 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188364 20 0 Out-of-frame Intra-chr p11.2 130396 ChimerSeq STARFusion Babiceanu et TFG-GPR128 TFG chr3 100438902 + GPR128 chr3 100348442 + Exonic hg19 Non-Cancer ERR188281 37 36 In-Frame Intra-chr q12.2 130397 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188281 11 0 Out-of-frame Intra-chr p11.2 130398 ChimerSeq STARFusion Babiceanu et BCAS4-IGH@ BCAS4 chr20 49457268 + IGH@ chr14 106321323 - Exonic hg19 Non-Cancer ERR188281 3 1 Out-of-frame Inter-chr q13.13 32.33 130399 ChimerSeq STARFusion Babiceanu et BCAS4-IGHM BCAS4 chr20 49457268 + IGHM chr14 106321323 - Exonic hg19 Non-Cancer ERR188281 3 1 Out-of-frame Inter-chr q13.13 q32.33 130400 ChimerSeq STARFusion Babiceanu et IGH@-TCEA2 IGH@ chr14 107048671 - TCEA2 chr20 62681272 + Exonic hg19 Non-Cancer ERR188131 88 0 Out-of-frame Inter-chr 32.33 q13.33 130401 ChimerSeq STARFusion Babiceanu et IGH@-TCEA2 IGH@ chr14 107131035 - TCEA2 chr20 62681269 + Exonic hg19 Non-Cancer ERR188131 26 0 Out-of-frame Inter-chr 32.33 q13.33 130402 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188131 22 0 Out-of-frame Intra-chr p11.2 130403 ChimerSeq STARFusion Babiceanu et IGH@-TCEA2 IGH@ chr14 106791007 - TCEA2 chr20 62681269 + Exonic hg19 Non-Cancer ERR188131 12 0 Out-of-frame Inter-chr 32.33 q13.33 130404 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188245 7 0 Out-of-frame Intra-chr p11.2 130405 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188429 13 0 Out-of-frame Intra-chr p11.2 130406 ChimerSeq STARFusion Babiceanu et RPL17P50-P4HA1 RPL17P50 chr10 74765903 - P4HA1 chr10 74767275 - Exonic hg19 Non-Cancer ERR188429 5 0 Out-of-frame Intra-chr q22.1 q22.1 130407 ChimerSeq STARFusion Babiceanu et ACTB-IGH@ ACTB chr7 5567455 - IGH@ chr14 106321619 - Exonic hg19 Non-Cancer ERR188298 3 29 Out-of-frame Inter-chr p22.1 32.33 130408 ChimerSeq STARFusion Babiceanu et ACTB-IGHM ACTB chr7 5567455 - IGHM chr14 106321619 - Exonic hg19 Non-Cancer ERR188298 3 22 Out-of-frame Inter-chr p22.1 q32.33 130409 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188298 7 0 Out-of-frame Intra-chr p11.2 130410 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188278 7 0 Out-of-frame Intra-chr p11.2 130411 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188434 11 0 Out-of-frame Intra-chr p11.2 130412 ChimerSeq STARFusion Babiceanu et PSMD13-IGH@ PSMD13 chr11 236791 + IGH@ chr14 106330460 - Exonic hg19 Non-Cancer ERR188112 40 0 Out-of-frame Inter-chr p15.5 32.33 130413 ChimerSeq STARFusion Babiceanu et PSMD13-IGHJ4 PSMD13 chr11 236791 + IGHJ4 chr14 106330460 - Exonic hg19 Non-Cancer ERR188112 40 0 Out-of-frame Inter-chr p15.5 130414 ChimerSeq STARFusion Babiceanu et PSMD13-IGHM PSMD13 chr11 236793 + IGHM chr14 106330458 - Exonic hg19 Non-Cancer ERR188112 38 0 Out-of-frame Inter-chr p15.5 q32.33 130415 ChimerSeq STARFusion Babiceanu et RPL17P50-P4HA1 RPL17P50 chr10 74765901 - P4HA1 chr10 74767274 - Exonic hg19 Non-Cancer ERR188112 4 0 Out-of-frame Intra-chr q22.1 q22.1 130416 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188385 6 0 Out-of-frame Intra-chr p11.2 130417 ChimerSeq STARFusion Babiceanu et PNKD-IGH@ PNKD chr2 219135282 + IGH@ chr14 106330068 - Exonic hg19 Non-Cancer ERR188385 6 0 Out-of-frame Inter-chr q35 32.33 130418 ChimerSeq STARFusion Babiceanu et PNKD-IGHJ5 PNKD chr2 219135282 + IGHJ5 chr14 106330068 - Exonic hg19 Non-Cancer ERR188385 6 0 Out-of-frame Inter-chr q35 130419 ChimerSeq STARFusion Babiceanu et PNKD-IGHM PNKD chr2 219135282 + IGHM chr14 106330068 - Exonic hg19 Non-Cancer ERR188385 6 0 Out-of-frame Inter-chr q35 q32.33 130420 ChimerSeq STARFusion Babiceanu et RPL17P50-P4HA1 RPL17P50 chr10 74765901 - P4HA1 chr10 74767274 - Exonic hg19 Non-Cancer ERR188385 3 0 Out-of-frame Intra-chr q22.1 q22.1 130421 ChimerSeq STARFusion Babiceanu et CXorf23-SH3KBP1 CXorf23 chrX 19953927 - SH3KBP1 chrX 19764559 - Exonic hg19 Non-Cancer ERR188385 2 1 In-Frame Intra-chr p22.12 p22.12 130422 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188105 19 0 Out-of-frame Intra-chr p11.2 130423 ChimerSeq STARFusion Babiceanu et SLC25A45-ITPA SLC25A45 chr11 65149386 - ITPA chr20 3199163 + Exonic hg19 Non-Cancer ERR188273 2 0 Out-of-frame Inter-chr q13.1 p13 130424 ChimerSeq STARFusion Babiceanu et FOXJ3-YBX1 FOXJ3 chr1 42776721 - YBX1 chr1 43159161 + Exonic hg19 Non-Cancer ERR188417 2 0 Out-of-frame Intra-chr p34.2 Transcription factor p34.2 Transcription factor 130425 ChimerSeq STARFusion Babiceanu et RBBP4-C1QBP RBBP4 chr1 33127938 + C1QBP chr17 5338286 - Exonic hg19 Non-Cancer ERR188417 2 0 Out-of-frame Inter-chr p35.1 p13.2 130426 ChimerSeq STARFusion Babiceanu et RWDD4-OGFOD3 RWDD4 chr4 184567641 - OGFOD3 chr17 80350410 - Exonic hg19 Non-Cancer ERR188124 2 0 Out-of-frame Inter-chr q35.1 q25.3 130427 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188377 3 0 Out-of-frame Intra-chr p11.2 130428 ChimerSeq STARFusion Babiceanu et BLNK-PCM1 BLNK chr10 98031109 - PCM1 chr8 17847368 + Exonic hg19 Non-Cancer ERR188377 2 0 Out-of-frame Inter-chr q24.1 Oncogene Tumor suppressor gene p22 130429 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188146 15 0 Out-of-frame Intra-chr p11.2 130430 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188463 17 0 Out-of-frame Intra-chr p11.2 130431 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188452 14 0 Out-of-frame Intra-chr p11.2 130432 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188342 9 0 Out-of-frame Intra-chr p11.2 130433 ChimerSeq STARFusion Babiceanu et IGL@-RPH3A IGL@ chr22 23165772 + RPH3A chr12 113013073 + Exonic hg19 Non-Cancer ERR188110 5 0 Out-of-frame Inter-chr q11.22 q24.13 130434 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188110 5 0 Out-of-frame Intra-chr p11.2 130435 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188374 5 0 Out-of-frame Intra-chr p11.2 130436 ChimerSeq STARFusion Babiceanu et IGH@-HMGB2 IGH@ chr14 106552288 - HMGB2 chr4 174255353 - Exonic hg19 Non-Cancer ERR188374 3 1 Out-of-frame Inter-chr 32.33 q34.1 130437 ChimerSeq STARFusion Babiceanu et FOXP1-IGH@ FOXP1 chr3 71633094 - IGH@ chr14 106330063 - Exonic hg19 Non-Cancer ERR188374 3 0 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor 32.33 130438 ChimerSeq STARFusion Babiceanu et FOXP1-IGH@ FOXP1 chr3 71633095 - IGH@ chr14 106330465 - Exonic hg19 Non-Cancer ERR188374 3 0 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor 32.33 130439 ChimerSeq STARFusion Babiceanu et FOXP1-IGHJ4 FOXP1 chr3 71633095 - IGHJ4 chr14 106330465 - Exonic hg19 Non-Cancer ERR188374 3 0 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor 130440 ChimerSeq STARFusion Babiceanu et FOXP1-IGHM FOXP1 chr3 71633094 - IGHM chr14 106330063 - Exonic hg19 Non-Cancer ERR188374 3 0 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor q32.33 130441 ChimerSeq STARFusion Babiceanu et FOXP1-IGHM FOXP1 chr3 71633095 - IGHM chr14 106330465 - Exonic hg19 Non-Cancer ERR188374 3 0 Out-of-frame Inter-chr p13 Oncogene Tumor suppressor gene Transcription factor q32.33 130442 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188097 47 0 Out-of-frame Intra-chr p11.2 130443 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188416 8 0 Out-of-frame Intra-chr p11.2 130444 ChimerSeq STARFusion Babiceanu et IGL@-SNN IGL@ chr22 23223567 + SNN chr16 11770099 + Exonic hg19 Non-Cancer ERR188416 5 0 Out-of-frame Inter-chr q11.22 p13.13 130445 ChimerSeq STARFusion Babiceanu et CLEC16A-SNTB2 CLEC16A chr16 11076848 + SNTB2 chr16 69304046 + Exonic hg19 Non-Cancer ERR188416 3 0 In-Frame Intra-chr p13.13 130446 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188270 4 0 Out-of-frame Intra-chr p11.2 130447 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188453 14 0 Out-of-frame Intra-chr p11.2 130448 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188409 27 0 Out-of-frame Intra-chr p11.2 130449 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188168 15 0 Out-of-frame Intra-chr p11.2 130450 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188290 4 0 Out-of-frame Intra-chr p11.2 130451 ChimerSeq STARFusion Babiceanu et SCNN1D-IGH@ SCNN1D chr1 1221540 + IGH@ chr14 106209410 - Exonic hg19 Non-Cancer ERR188348 6 0 Out-of-frame Inter-chr p36.33 32.33 130452 ChimerSeq STARFusion Babiceanu et SCNN1D-IGH@ SCNN1D chr1 1221540 + IGH@ chr14 106237745 - Exonic hg19 Non-Cancer ERR188348 6 0 Out-of-frame Inter-chr p36.33 32.33 130453 ChimerSeq STARFusion Babiceanu et SCNN1D-IGHG1 SCNN1D chr1 1221540 + IGHG1 chr14 106209410 - Exonic hg19 Non-Cancer ERR188348 6 0 Out-of-frame Inter-chr p36.33 q32.33 130454 ChimerSeq STARFusion Babiceanu et SCNN1D-IGHG1 SCNN1D chr1 1221540 + IGHG1 chr14 106237745 - Exonic hg19 Non-Cancer ERR188348 6 0 Out-of-frame Inter-chr p36.33 q32.33 130455 ChimerSeq STARFusion Babiceanu et C11orf31-BCAS4 C11orf31 chr11 57509118 + BCAS4 chr20 49457149 + Exonic hg19 Non-Cancer ERR188348 5 1 Out-of-frame Inter-chr q13.13 130456 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188393 13 0 Out-of-frame Intra-chr p11.2 130457 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188030 9 0 Out-of-frame Intra-chr p11.2 130458 ChimerSeq STARFusion Babiceanu et INPP4A-UBE2J1 INPP4A chr2 99156138 + UBE2J1 chr6 90045150 - Exonic hg19 Non-Cancer ERR188030 2 0 In-Frame Inter-chr q11.2 q15 130459 ChimerSeq STARFusion Babiceanu et NF1-AATF NF1 chr17 29497015 + AATF chr17 35413901 + Exonic hg19 Non-Cancer ERR188030 2 0 Out-of-frame Intra-chr q11.2 Oncogene Tumor suppressor gene 130460 ChimerSeq STARFusion Babiceanu et SLC25A43-YWHAH SLC25A43 chrX 118533641 + YWHAH chr22 32352126 + Exonic hg19 Non-Cancer ERR188030 2 0 Out-of-frame Inter-chr q24 q12.3 130461 ChimerSeq STARFusion Babiceanu et SZT2-PITPNC1 SZT2 chr1 43855666 + PITPNC1 chr17 65528918 + Exonic hg19 Non-Cancer ERR188030 2 0 In-Frame Inter-chr p34.2 q24.2 130462 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188139 13 0 Out-of-frame Intra-chr p11.2 130463 ChimerSeq STARFusion Babiceanu et VIM-KRT81 VIM chr10 17271726 + KRT81 chr12 52684893 - Exonic hg19 Non-Cancer ERR188139 6 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130464 ChimerSeq STARFusion Babiceanu et VIM-KRT86 VIM chr10 17271726 + KRT86 chr12 52696057 + Exonic hg19 Non-Cancer ERR188139 6 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130465 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188137 12 0 Out-of-frame Intra-chr p11.2 130466 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188043 14 0 Out-of-frame Intra-chr p11.2 130467 ChimerSeq STARFusion Babiceanu et IGH@-ATXN2 IGH@ chr14 106321585 - ATXN2 chr12 111891589 - Exonic hg19 Non-Cancer ERR188043 4 1 Out-of-frame Inter-chr 32.33 q24.12 130468 ChimerSeq STARFusion Babiceanu et IGHM-ATXN2 IGHM chr14 106321585 - ATXN2 chr12 111891589 - Exonic hg19 Non-Cancer ERR188043 4 1 Out-of-frame Inter-chr q32.33 q24.12 130469 ChimerSeq STARFusion Babiceanu et RFC1-KLB RFC1 chr4 39367859 - KLB chr4 39435830 + Exonic hg19 Non-Cancer ERR188046 4 10 Out-of-frame Intra-chr p14 p14 130470 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188209 17 0 Out-of-frame Intra-chr p11.2 130471 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188068 3 0 Out-of-frame Intra-chr p11.2 130472 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188141 8 0 Out-of-frame Intra-chr p11.2 130473 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188033 6 0 Out-of-frame Intra-chr p11.2 130474 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188475 9 0 Out-of-frame Intra-chr p11.2 130475 ChimerSeq STARFusion Babiceanu et C19orf47-IGH@ C19orf47 chr19 40826479 - IGH@ chr14 106330842 - Exonic hg19 Non-Cancer ERR188475 4 0 Out-of-frame Inter-chr q13.2 32.33 130476 ChimerSeq STARFusion Babiceanu et C19orf47-IGHJ3 C19orf47 chr19 40826479 - IGHJ3 chr14 106330842 - Exonic hg19 Non-Cancer ERR188475 4 0 Out-of-frame Inter-chr q13.2 q32.33 130477 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188454 16 0 Out-of-frame Intra-chr p11.2 130478 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188120 12 0 Out-of-frame Intra-chr p11.2 130479 ChimerSeq STARFusion Babiceanu et CCL22-RN7SL1 CCL22 chr16 57399560 + RN7SL1 chr14 50053367 + Exonic hg19 Non-Cancer ERR188126 4 6 Out-of-frame Inter-chr q21 q21.3 130480 ChimerSeq STARFusion Babiceanu et TAPBP-RN7SL2 TAPBP chr6 33268340 - RN7SL2 chr14 50329537 - Exonic hg19 Non-Cancer ERR188126 3 5 Out-of-frame Inter-chr q21.3 130481 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188297 8 0 Out-of-frame Intra-chr p11.2 130482 ChimerSeq STARFusion Babiceanu et PDE6B-PPP2R2D PDE6B chr4 619882 + PPP2R2D chr10 133747960 + Exonic hg19 Non-Cancer ERR188029 12 0 Out-of-frame Inter-chr p16.3 q26.3 130483 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188170 26 0 Out-of-frame Intra-chr p11.2 130484 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188066 31 0 Out-of-frame Intra-chr p11.2 130485 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188321 7 0 Out-of-frame Intra-chr p11.2 130486 ChimerSeq STARFusion Babiceanu et PRAMENP-AMN PRAMENP chr22 22380647 - AMN chr14 103397384 + Exonic hg19 Non-Cancer ERR188042 17 0 Out-of-frame Inter-chr q11.22 q32.32 130487 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188042 5 0 Out-of-frame Intra-chr p11.2 130488 ChimerSeq STARFusion Babiceanu et MIR155HG-JAM2 MIR155HG chr21 26934569 + JAM2 chr21 27056195 + Exonic hg19 Non-Cancer ERR188042 2 1 5'UTR-CDS Intra-chr q21.3 q21.3 130489 ChimerSeq STARFusion Babiceanu et TIMM23B-PARGP1 TIMM23B chr10 51387763 + PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer ERR188048 8 6 Out-of-frame Intra-chr q11.23 q11.22 130490 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188048 5 0 Out-of-frame Intra-chr p11.2 130491 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188073 8 0 Out-of-frame Intra-chr p11.2 130492 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188476 24 0 Out-of-frame Intra-chr p11.2 130493 ChimerSeq STARFusion Babiceanu et IGH@-SEC24D IGH@ chr14 107095123 - SEC24D chr4 119650416 - Exonic hg19 Non-Cancer ERR188443 3 1 Out-of-frame Inter-chr 32.33 q26 130494 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188451 12 0 Out-of-frame Intra-chr p11.2 130495 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188460 14 0 Out-of-frame Intra-chr p11.2 130496 ChimerSeq STARFusion Babiceanu et VIM-KRT81 VIM chr10 17271729 + KRT81 chr12 52684890 - Exonic hg19 Non-Cancer ERR188460 5 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130497 ChimerSeq STARFusion Babiceanu et VIM-KRT86 VIM chr10 17271729 + KRT86 chr12 52696060 + Exonic hg19 Non-Cancer ERR188460 5 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130498 ChimerSeq STARFusion Babiceanu et FBXW7-FAM156A FBXW7 chr4 153268082 - FAM156A chrX 52985544 - Exonic hg19 Non-Cancer ERR188445 2 0 CDS-5'UTR Inter-chr q31.3 Oncogene Tumor suppressor gene p11.22 130499 ChimerSeq STARFusion Babiceanu et RCC1-ADK RCC1 chr1 28834672 + ADK chr10 76429941 + Exonic hg19 Non-Cancer ERR188445 2 0 5'UTR-CDS Inter-chr p35.3 q22.2 130500 ChimerSeq STARFusion Babiceanu et SNHG3-ADK SNHG3 chr1 28834672 + ADK chr10 76429941 + Exonic hg19 Non-Cancer ERR188445 2 0 5'UTR-CDS Inter-chr p35.3 q22.2 130501 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188322 12 0 Out-of-frame Intra-chr p11.2 130502 ChimerSeq STARFusion Babiceanu et HCG4P7-ACTB HCG4P7 chr6 29855904 - ACTB chr7 5567414 - Exonic hg19 Non-Cancer ERR188322 3 0 Out-of-frame Inter-chr p22.1 130503 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188367 11 0 Out-of-frame Intra-chr p11.2 130504 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188228 12 0 Out-of-frame Intra-chr p11.2 130505 ChimerSeq STARFusion Babiceanu et RBBP4-C1QBP RBBP4 chr1 33127938 + C1QBP chr17 5338286 - Exonic hg19 Non-Cancer ERR188309 4 0 Out-of-frame Inter-chr p35.1 p13.2 130506 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188060 12 0 Out-of-frame Intra-chr p11.2 130507 ChimerSeq STARFusion Babiceanu et MAP4K5-SLFN12L MAP4K5 chr14 50998660 - SLFN12L chr17 33791600 - Exonic hg19 Non-Cancer ERR188060 2 0 Out-of-frame Inter-chr q22.1 q12 130508 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188236 5 0 Out-of-frame Intra-chr p11.2 130509 ChimerSeq STARFusion Babiceanu et IGH@-RBKS IGH@ chr14 106757651 - RBKS chr2 28004504 - Exonic hg19 Non-Cancer ERR188236 3 0 Out-of-frame Inter-chr 32.33 p23.2 130510 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188442 7 0 Out-of-frame Intra-chr p11.2 130511 ChimerSeq STARFusion Babiceanu et CBFB-CHPF CBFB chr16 67070658 + CHPF chr2 220405847 - Exonic hg19 Non-Cancer ERR188442 2 0 In-Frame Inter-chr q22.1 q35 130512 ChimerSeq STARFusion Babiceanu et HNRNPA1-ENO2 HNRNPA1 chr12 54675286 + ENO2 chr12 7024985 + Exonic hg19 Non-Cancer ERR188442 2 0 CDS-5'UTR Intra-chr q13.13 p13.31 130513 ChimerSeq STARFusion Babiceanu et E2F4-RPL14 E2F4 chr16 67229791 + RPL14 chr3 40503545 + Exonic hg19 Non-Cancer ERR188401 4 1 Out-of-frame Inter-chr q22.1 Transcription factor p22.1 130514 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188239 4 0 Out-of-frame Intra-chr p11.2 130515 ChimerSeq STARFusion Babiceanu et TOLLIP-TBCD TOLLIP chr11 1307232 - TBCD chr17 80863812 + Exonic hg19 Non-Cancer ERR188239 2 0 Out-of-frame Inter-chr p15.5 130516 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188088 18 0 Out-of-frame Intra-chr p11.2 130517 ChimerSeq STARFusion Babiceanu et VIM-KRT81 VIM chr10 17271726 + KRT81 chr12 52684893 - Exonic hg19 Non-Cancer ERR188088 4 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130518 ChimerSeq STARFusion Babiceanu et VIM-KRT86 VIM chr10 17271726 + KRT86 chr12 52696057 + Exonic hg19 Non-Cancer ERR188088 4 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130519 ChimerSeq STARFusion Babiceanu et LITAF-RN7SL1 LITAF chr16 11642638 - RN7SL1 chr14 50053372 + Exonic hg19 Non-Cancer ERR188088 3 3 Out-of-frame Inter-chr p13.13 Tumor suppressor gene q21.3 130520 ChimerSeq STARFusion Babiceanu et VIM-KRT81 VIM chr10 17271729 + KRT81 chr12 52684890 - Exonic hg19 Non-Cancer ERR188255 6 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130521 ChimerSeq STARFusion Babiceanu et VIM-KRT86 VIM chr10 17271729 + KRT86 chr12 52696060 + Exonic hg19 Non-Cancer ERR188255 6 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130522 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188255 5 0 Out-of-frame Intra-chr p11.2 130523 ChimerSeq STARFusion Babiceanu et PDE6B-PPP2R2D PDE6B chr4 619882 + PPP2R2D chr10 133747960 + Exonic hg19 Non-Cancer ERR188212 9 0 Out-of-frame Inter-chr p16.3 q26.3 130524 ChimerSeq STARFusion Babiceanu et IGJ-PSMD5 IGJ chr4 71521677 - PSMD5 chr9 123586599 - Exonic hg19 Non-Cancer ERR188212 4 0 Out-of-frame Inter-chr q33.2 130525 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188116 4 0 Out-of-frame Intra-chr p11.2 130526 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188035 8 0 Out-of-frame Intra-chr p11.2 130527 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188305 9 0 Out-of-frame Intra-chr p11.2 130528 ChimerSeq STARFusion Babiceanu et SZT2-IGH@ SZT2 chr1 43894866 + IGH@ chr14 106329440 - Exonic hg19 Non-Cancer ERR188231 10 1 Out-of-frame Inter-chr p34.2 32.33 130529 ChimerSeq STARFusion Babiceanu et SZT2-IGHM SZT2 chr1 43894866 + IGHM chr14 106329440 - Exonic hg19 Non-Cancer ERR188231 9 1 Out-of-frame Inter-chr p34.2 q32.33 130530 ChimerSeq STARFusion Babiceanu et IGH@-ITPR1 IGH@ chr14 106877618 - ITPR1 chr3 4715885 + Exonic hg19 Non-Cancer ERR188231 6 1 Out-of-frame Inter-chr 32.33 p26.1 130531 ChimerSeq STARFusion Babiceanu et IGL@-LHFPL2 IGL@ chr22 23077566 + LHFPL2 chr5 78062612 - Exonic hg19 Non-Cancer ERR188231 5 0 Out-of-frame Inter-chr q11.22 q14.1 130532 ChimerSeq STARFusion Babiceanu et IGH@-ITPR1 IGH@ chr14 106829594 - ITPR1 chr3 4715884 + Exonic hg19 Non-Cancer ERR188231 4 1 Out-of-frame Inter-chr 32.33 p26.1 130533 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188430 8 0 Out-of-frame Intra-chr p11.2 130534 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188232 5 0 Out-of-frame Intra-chr p11.2 130535 ChimerSeq STARFusion Babiceanu et GXYLT1-PPHLN1 GXYLT1 chr12 42491244 - PPHLN1 chr12 42835117 + Exonic hg19 Non-Cancer ERR188232 2 0 Out-of-frame Intra-chr q12 q12 130536 ChimerSeq STARFusion Babiceanu et RCC1-CPNE1 RCC1 chr1 28834672 + CPNE1 chr20 34220845 - Exonic hg19 Non-Cancer ERR188232 2 0 5'UTR-5'UTR Inter-chr p35.3 q11.22 130537 ChimerSeq STARFusion Babiceanu et SNHG3-CPNE1 SNHG3 chr1 28834672 + CPNE1 chr20 34220845 - Exonic hg19 Non-Cancer ERR188232 2 0 5'UTR-5'UTR Inter-chr p35.3 q11.22 130538 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188132 17 0 Out-of-frame Intra-chr p11.2 130539 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188400 9 0 Out-of-frame Intra-chr p11.2 130540 ChimerSeq STARFusion Babiceanu et CCL22-RN7SL1 CCL22 chr16 57399565 + RN7SL1 chr14 50053372 + Exonic hg19 Non-Cancer ERR188400 4 8 Out-of-frame Inter-chr q21 q21.3 130541 ChimerSeq STARFusion Babiceanu et ZCCHC6-IGH@ ZCCHC6 chr9 88920091 - IGH@ chr14 106330063 - Exonic hg19 Non-Cancer ERR188106 4 0 Out-of-frame Inter-chr q21.33 32.33 130542 ChimerSeq STARFusion Babiceanu et ZCCHC6-IGHJ5 ZCCHC6 chr9 88920091 - IGHJ5 chr14 106330063 - Exonic hg19 Non-Cancer ERR188106 4 0 Out-of-frame Inter-chr q21.33 130543 ChimerSeq STARFusion Babiceanu et ZCCHC6-IGHM ZCCHC6 chr9 88920091 - IGHM chr14 106330063 - Exonic hg19 Non-Cancer ERR188106 4 0 Out-of-frame Inter-chr q21.33 q32.33 130544 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188216 8 0 Out-of-frame Intra-chr p11.2 130545 ChimerSeq STARFusion Babiceanu et IGH@-ATXN2 IGH@ chr14 106321585 - ATXN2 chr12 111891589 - Exonic hg19 Non-Cancer ERR188479 3 1 Out-of-frame Inter-chr 32.33 q24.12 130546 ChimerSeq STARFusion Babiceanu et IGHM-ATXN2 IGHM chr14 106321585 - ATXN2 chr12 111891589 - Exonic hg19 Non-Cancer ERR188479 3 1 Out-of-frame Inter-chr q32.33 q24.12 130547 ChimerSeq STARFusion Babiceanu et DENND4A-MAP2K1 DENND4A chr15 66084348 - MAP2K1 chr15 66774093 + Exonic hg19 Non-Cancer ERR188479 2 1 Out-of-frame Intra-chr q22.31 q22.31 STE:STE7 Oncogene 130548 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188303 14 0 Out-of-frame Intra-chr p11.2 130549 ChimerSeq STARFusion Babiceanu et WDR34-IGH@ WDR34 chr9 131397387 - IGH@ chr14 106331659 - Exonic hg19 Non-Cancer ERR188087 33 0 Out-of-frame Inter-chr q34.11 32.33 130550 ChimerSeq STARFusion Babiceanu et WDR34-IGHJ1 WDR34 chr9 131397387 - IGHJ1 chr14 106331659 - Exonic hg19 Non-Cancer ERR188087 33 0 Out-of-frame Inter-chr q34.11 130551 ChimerSeq STARFusion Babiceanu et WDR34-IGHM WDR34 chr9 131397387 - IGHM chr14 106331659 - Exonic hg19 Non-Cancer ERR188087 33 0 Out-of-frame Inter-chr q34.11 q32.33 130552 ChimerSeq STARFusion Babiceanu et VIM-KRT81 VIM chr10 17271726 + KRT81 chr12 52684893 - Exonic hg19 Non-Cancer ERR188087 4 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130553 ChimerSeq STARFusion Babiceanu et VIM-KRT86 VIM chr10 17271726 + KRT86 chr12 52696057 + Exonic hg19 Non-Cancer ERR188087 4 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130554 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188087 3 0 Out-of-frame Intra-chr p11.2 130555 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188074 26 0 Out-of-frame Intra-chr p11.2 130556 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188336 4 0 Out-of-frame Intra-chr p11.2 130557 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188208 7 0 Out-of-frame Intra-chr p11.2 130558 ChimerSeq STARFusion Babiceanu et PTMA-RER1 PTMA chr2 232573461 + RER1 chr1 2327223 + Exonic hg19 Non-Cancer ERR188208 2 0 CDS-5'UTR Inter-chr q37.1 p36.32 130559 ChimerSeq STARFusion Babiceanu et QPCTL-NDUFB4 QPCTL chr19 46196814 + NDUFB4 chr3 120319958 + Exonic hg19 Non-Cancer ERR188208 2 0 In-Frame Inter-chr q13.32 q13.33 130560 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188162 10 0 Out-of-frame Intra-chr p11.2 130561 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188188 28 0 Out-of-frame Intra-chr p11.2 130562 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188061 5 0 Out-of-frame Intra-chr p11.2 130563 ChimerSeq STARFusion Babiceanu et CCL22-RN7SL1 CCL22 chr16 57399560 + RN7SL1 chr14 50053367 + Exonic hg19 Non-Cancer ERR188432 5 6 Out-of-frame Inter-chr q21 q21.3 130564 ChimerSeq STARFusion Babiceanu et TAPBP-RN7SL2 TAPBP chr6 33268340 - RN7SL2 chr14 50329537 - Exonic hg19 Non-Cancer ERR188432 3 4 Out-of-frame Inter-chr q21.3 130565 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188459 12 0 Out-of-frame Intra-chr p11.2 130566 ChimerSeq STARFusion Babiceanu et CGN-IGH@ CGN chr1 151507618 + IGH@ chr14 106330471 - Exonic hg19 Non-Cancer ERR188459 8 0 Out-of-frame Inter-chr q21.3 32.33 130567 ChimerSeq STARFusion Babiceanu et CGN-IGHJ4 CGN chr1 151507618 + IGHJ4 chr14 106330471 - Exonic hg19 Non-Cancer ERR188459 8 0 Out-of-frame Inter-chr q21.3 130568 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188138 8 0 Out-of-frame Intra-chr p11.2 130569 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188411 3 0 Out-of-frame Intra-chr p11.2 130570 ChimerSeq STARFusion Babiceanu et SRPK2-PUS7 SRPK2 chr7 104766229 - PUS7 chr7 105148991 - Exonic hg19 Non-Cancer ERR188081 9 5 CDS-5'UTR Intra-chr q22.3 CMGC:SRPK q22.3 130571 ChimerSeq STARFusion Babiceanu et SRPK2-PUS7 SRPK2 chr7 104766695 - PUS7 chr7 105148991 - Exonic hg19 Non-Cancer ERR188081 8 5 CDS-5'UTR Intra-chr q22.3 CMGC:SRPK q22.3 130572 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188207 27 0 Out-of-frame Intra-chr p11.2 130573 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188063 14 0 Out-of-frame Intra-chr p11.2 130574 ChimerSeq STARFusion Babiceanu et RNF144B-IGKC RNF144B chr6 18465227 + IGKC chr2 89160434 - Exonic hg19 Non-Cancer ERR188405 770 0 Out-of-frame Inter-chr p22.3 p11.2 130575 ChimerSeq STARFusion Babiceanu et RNF144B-IGKJ4 RNF144B chr6 18465227 + IGKJ4 chr2 89160434 - Exonic hg19 Non-Cancer ERR188405 770 0 Out-of-frame Inter-chr p22.3 p11.2 130576 ChimerSeq STARFusion Babiceanu et ANKS6-IGH@ ANKS6 chr9 101493593 - IGH@ chr14 106330058 - Exonic hg19 Non-Cancer ERR188405 7 0 Out-of-frame Inter-chr q22.33 32.33 130577 ChimerSeq STARFusion Babiceanu et ANKS6-IGH@ ANKS6 chr9 101493594 - IGH@ chr14 106331652 - Exonic hg19 Non-Cancer ERR188405 7 0 Out-of-frame Inter-chr q22.33 32.33 130578 ChimerSeq STARFusion Babiceanu et ANKS6-IGHG3 ANKS6 chr9 101493593 - IGHG3 chr14 106330058 - Exonic hg19 Non-Cancer ERR188405 7 0 Out-of-frame Inter-chr q22.33 130579 ChimerSeq STARFusion Babiceanu et ANKS6-IGHG3 ANKS6 chr9 101493594 - IGHG3 chr14 106331652 - Exonic hg19 Non-Cancer ERR188405 7 0 Out-of-frame Inter-chr q22.33 130580 ChimerSeq STARFusion Babiceanu et ANKS6-IGHJ1 ANKS6 chr9 101493594 - IGHJ1 chr14 106331652 - Exonic hg19 Non-Cancer ERR188405 7 0 Out-of-frame Inter-chr q22.33 130581 ChimerSeq STARFusion Babiceanu et ANKS6-IGHJ5 ANKS6 chr9 101493593 - IGHJ5 chr14 106330058 - Exonic hg19 Non-Cancer ERR188405 7 0 Out-of-frame Inter-chr q22.33 130582 ChimerSeq STARFusion Babiceanu et VIM-KRT86 VIM chr10 17271729 + KRT86 chr12 52696060 + Exonic hg19 Non-Cancer ERR188405 7 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130583 ChimerSeq STARFusion Babiceanu et VIM-KRT81 VIM chr10 17271729 + KRT81 chr12 52684890 - Exonic hg19 Non-Cancer ERR188405 6 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130584 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188341 38 0 Out-of-frame Intra-chr p11.2 130585 ChimerSeq STARFusion Babiceanu et LRRTM4-IGH@ LRRTM4 chr2 77746301 - IGH@ chr14 106209402 - Exonic hg19 Non-Cancer ERR188341 8 0 Out-of-frame Inter-chr p12 32.33 130586 ChimerSeq STARFusion Babiceanu et LRRTM4-IGHG1 LRRTM4 chr2 77746301 - IGHG1 chr14 106209402 - Exonic hg19 Non-Cancer ERR188341 8 0 Out-of-frame Inter-chr p12 q32.33 130587 ChimerSeq STARFusion Babiceanu et MYEOV-IGH@ MYEOV chr11 69064658 + IGH@ chr14 106209410 - Exonic hg19 Non-Cancer ERR188323 121 0 Out-of-frame Inter-chr q13.3 32.33 130588 ChimerSeq STARFusion Babiceanu et MYEOV-IGHG1 MYEOV chr11 69064658 + IGHG1 chr14 106209410 - Exonic hg19 Non-Cancer ERR188323 121 0 Out-of-frame Inter-chr q13.3 q32.33 130589 ChimerSeq STARFusion Babiceanu et MYEOV-IGH@ MYEOV chr11 69064658 + IGH@ chr14 106111129 - Exonic hg19 Non-Cancer ERR188323 83 0 Out-of-frame Inter-chr q13.3 32.33 130590 ChimerSeq STARFusion Babiceanu et MYEOV-IGH@ MYEOV chr11 69064658 + IGH@ chr14 106237745 - Exonic hg19 Non-Cancer ERR188323 29 0 Out-of-frame Inter-chr q13.3 32.33 130591 ChimerSeq STARFusion Babiceanu et TIMM23B-PARGP1 TIMM23B chr10 51387763 + PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer ERR188323 6 6 Out-of-frame Intra-chr q11.23 q11.22 130592 ChimerSeq STARFusion Babiceanu et IGH@-DENND1C IGH@ chr14 107169930 - DENND1C chr19 6476268 - Exonic hg19 Non-Cancer ERR188080 8 0 Out-of-frame Inter-chr 32.33 p13.3 130593 ChimerSeq STARFusion Babiceanu et NAP1L4-CARS NAP1L4 chr11 2999514 - CARS chr11 3033506 - Exonic hg19 Non-Cancer ERR188468 36 58 Out-of-frame Intra-chr 130594 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188086 7 0 Out-of-frame Intra-chr p11.2 130595 ChimerSeq STARFusion Babiceanu et RPN2-RPS27AP3 RPN2 chr20 35812776 + RPS27AP3 chr20 35677685 + Exonic hg19 Non-Cancer ERR188274 4 1 Out-of-frame Intra-chr q11.23 q11.23 130596 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188274 4 0 Out-of-frame Intra-chr p11.2 130597 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188158 27 0 Out-of-frame Intra-chr p11.2 130598 ChimerSeq STARFusion Babiceanu et TFG-GPR128 TFG chr3 100438902 + GPR128 chr3 100348442 + Exonic hg19 Non-Cancer ERR188242 12 12 In-Frame Intra-chr q12.2 130599 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188104 23 0 Out-of-frame Intra-chr p11.2 130600 ChimerSeq STARFusion Babiceanu et TMEM9B-HCLS1 TMEM9B chr11 8985911 - HCLS1 chr3 121351321 - Exonic hg19 Non-Cancer ERR188104 4 0 Out-of-frame Inter-chr p15.4 q13.33 130601 ChimerSeq STARFusion Babiceanu et FAM221B-IGL@ FAM221B chr9 35821513 - IGL@ chr22 23247170 + Exonic hg19 Non-Cancer ERR188077 1310 0 Out-of-frame Inter-chr p13.3 q11.22 130602 ChimerSeq STARFusion Babiceanu et FAM221B-IGLJ3 FAM221B chr9 35821513 - IGLJ3 chr22 23247170 + Exonic hg19 Non-Cancer ERR188077 1310 0 Out-of-frame Inter-chr p13.3 q11.22 130603 ChimerSeq STARFusion Babiceanu et FAM221B-IGLC3 FAM221B chr9 35821513 - IGLC3 chr22 23247170 + Exonic hg19 Non-Cancer ERR188077 1292 0 Out-of-frame Inter-chr p13.3 q11.22 130604 ChimerSeq STARFusion Babiceanu et LINC00987-IGL@ LINC00987 chr12 9392733 + IGL@ chr22 22385423 + Exonic hg19 Non-Cancer ERR188077 3 14 Out-of-frame Inter-chr p13.31 q11.22 130605 ChimerSeq STARFusion Babiceanu et BCAS4-IGH@ BCAS4 chr20 49457268 + IGH@ chr14 106321323 - Exonic hg19 Non-Cancer ERR188077 4 6 Out-of-frame Inter-chr q13.13 32.33 130606 ChimerSeq STARFusion Babiceanu et BCAS4-IGHM BCAS4 chr20 49457268 + IGHM chr14 106321323 - Exonic hg19 Non-Cancer ERR188077 4 5 Out-of-frame Inter-chr q13.13 q32.33 130607 ChimerSeq STARFusion Babiceanu et MARK2P11-IGL@ MARK2P11 chr5 157415161 - IGL@ chr22 23241803 + Exonic hg19 Non-Cancer ERR188280 17 0 Out-of-frame Inter-chr q33.3 q11.22 130608 ChimerSeq STARFusion Babiceanu et MARK2P11-IGLC2 MARK2P11 chr5 157415161 - IGLC2 chr22 23241803 + Exonic hg19 Non-Cancer ERR188280 17 0 Out-of-frame Inter-chr q33.3 q11.22 130609 ChimerSeq STARFusion Babiceanu et MARK2P11-IGLJ2 MARK2P11 chr5 157415161 - IGLJ2 chr22 23241803 + Exonic hg19 Non-Cancer ERR188280 17 0 Out-of-frame Inter-chr q33.3 q11.22 130610 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188280 3 0 Out-of-frame Intra-chr p11.2 130611 ChimerSeq STARFusion Babiceanu et VIM-KRT81 VIM chr10 17271726 + KRT81 chr12 52684893 - Exonic hg19 Non-Cancer ERR188052 4 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130612 ChimerSeq STARFusion Babiceanu et VIM-KRT86 VIM chr10 17271726 + KRT86 chr12 52696057 + Exonic hg19 Non-Cancer ERR188052 4 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130613 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188243 27 0 Out-of-frame Intra-chr p11.2 130614 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188085 6 0 Out-of-frame Intra-chr p11.2 130615 ChimerSeq STARFusion Babiceanu et PDE6B-PPP2R2D PDE6B chr4 619882 + PPP2R2D chr10 133753533 + Exonic hg19 Non-Cancer ERR188085 3 0 Out-of-frame Inter-chr p16.3 q26.3 130616 ChimerSeq STARFusion Babiceanu et PARG-AGAP11 PARG chr10 51093249 - AGAP11 chr10 88759206 + Exonic hg19 Non-Cancer ERR188085 2 3 Out-of-frame Intra-chr q11.23 q23.2 130617 ChimerSeq STARFusion Babiceanu et PARG-BMS1P3 PARG chr10 51093249 - BMS1P3 chr10 88759206 + Exonic hg19 Non-Cancer ERR188085 2 3 Out-of-frame Intra-chr q11.23 q23.2 130618 ChimerSeq STARFusion Babiceanu et VIM-KRT81 VIM chr10 17271726 + KRT81 chr12 52684893 - Exonic hg19 Non-Cancer ERR188419 7 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130619 ChimerSeq STARFusion Babiceanu et VIM-KRT86 VIM chr10 17271726 + KRT86 chr12 52696057 + Exonic hg19 Non-Cancer ERR188419 7 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130620 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188455 6 0 Out-of-frame Intra-chr p11.2 130621 ChimerSeq STARFusion Babiceanu et LRRC23-IGH@ LRRC23 chr12 6982945 + IGH@ chr14 106322322 - Exonic hg19 Non-Cancer ERR188455 4 2 Out-of-frame Inter-chr p13.31 32.33 130622 ChimerSeq STARFusion Babiceanu et LRRC23-IGHM LRRC23 chr12 6982945 + IGHM chr14 106322322 - Exonic hg19 Non-Cancer ERR188455 4 2 Out-of-frame Inter-chr p13.31 q32.33 130623 ChimerSeq STARFusion Babiceanu et RPL13P5-IGH@ RPL13P5 chr12 6982945 + IGH@ chr14 106322322 - Exonic hg19 Non-Cancer ERR188455 4 2 Out-of-frame Inter-chr p13.31 32.33 130624 ChimerSeq STARFusion Babiceanu et RPL13P5-IGHM RPL13P5 chr12 6982945 + IGHM chr14 106322322 - Exonic hg19 Non-Cancer ERR188455 4 2 Out-of-frame Inter-chr p13.31 q32.33 130625 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188143 25 0 Out-of-frame Intra-chr p11.2 130626 ChimerSeq STARFusion Babiceanu et B2M-IGH@ B2M chr15 45003811 + IGH@ chr14 106322322 - Exonic hg19 Non-Cancer ERR188143 3 0 Out-of-frame Inter-chr Oncogene 32.33 130627 ChimerSeq STARFusion Babiceanu et B2M-IGHM B2M chr15 45003811 + IGHM chr14 106322322 - Exonic hg19 Non-Cancer ERR188143 3 0 Out-of-frame Inter-chr Oncogene q32.33 130628 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188458 10 0 Out-of-frame Intra-chr p11.2 130629 ChimerSeq STARFusion Babiceanu et RN7SL704P-YWHAB RN7SL704P chr22 38628005 + YWHAB chr20 43536091 + Exonic hg19 Non-Cancer ERR188458 5 0 Out-of-frame Inter-chr q13.1 q13.12 130630 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188241 9 0 Out-of-frame Intra-chr p11.2 130631 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188390 6 0 Out-of-frame Intra-chr p11.2 130632 ChimerSeq STARFusion Babiceanu et VIM-KRT81 VIM chr10 17271726 + KRT81 chr12 52684893 - Exonic hg19 Non-Cancer ERR188464 3 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130633 ChimerSeq STARFusion Babiceanu et VIM-KRT86 VIM chr10 17271726 + KRT86 chr12 52696057 + Exonic hg19 Non-Cancer ERR188464 3 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130634 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188174 19 0 Out-of-frame Intra-chr p11.2 130635 ChimerSeq STARFusion Babiceanu et B3GNT4-IGH@ B3GNT4 chr12 122691085 + IGH@ chr14 106209410 - Exonic hg19 Non-Cancer ERR188174 4 1 Out-of-frame Inter-chr q24.31 32.33 130636 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188372 7 0 Out-of-frame Intra-chr p11.2 130637 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188187 5 0 Out-of-frame Intra-chr p11.2 130638 ChimerSeq STARFusion Babiceanu et BCAS4-IGH@ BCAS4 chr20 49457270 + IGH@ chr14 106321322 - Exonic hg19 Non-Cancer ERR188169 3 2 Out-of-frame Inter-chr q13.13 32.33 130639 ChimerSeq STARFusion Babiceanu et BCAS4-IGHM BCAS4 chr20 49457270 + IGHM chr14 106321322 - Exonic hg19 Non-Cancer ERR188169 3 2 Out-of-frame Inter-chr q13.13 q32.33 130640 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188462 10 0 Out-of-frame Intra-chr p11.2 130641 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188121 7 0 Out-of-frame Intra-chr p11.2 130642 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188398 10 0 Out-of-frame Intra-chr p11.2 130643 ChimerSeq STARFusion Babiceanu et GINM1-PPIL4 GINM1 chr6 149887670 + PPIL4 chr6 149862567 - Exonic hg19 Non-Cancer ERR188340 8 2 Out-of-frame Intra-chr q25.1 q25.1 130644 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188292 21 0 Out-of-frame Intra-chr p11.2 130645 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188293 12 0 Out-of-frame Intra-chr p11.2 130646 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188122 13 0 Out-of-frame Intra-chr p11.2 130647 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188477 8 0 Out-of-frame Intra-chr p11.2 130648 ChimerSeq STARFusion Babiceanu et VIM-KRT81 VIM chr10 17271729 + KRT81 chr12 52684890 - Exonic hg19 Non-Cancer ERR188477 6 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130649 ChimerSeq STARFusion Babiceanu et VIM-KRT86 VIM chr10 17271729 + KRT86 chr12 52696060 + Exonic hg19 Non-Cancer ERR188477 6 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130650 ChimerSeq STARFusion Babiceanu et AMMECR1-ACTB AMMECR1 chrX 109561345 - ACTB chr7 5569289 - Exonic hg19 Non-Cancer ERR188477 4 0 Out-of-frame Inter-chr q23 p22.1 130651 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188155 8 0 Out-of-frame Intra-chr p11.2 130652 ChimerSeq STARFusion Babiceanu et BCAS4-IGH@ BCAS4 chr20 49457270 + IGH@ chr14 106321322 - Exonic hg19 Non-Cancer ERR188155 3 4 Out-of-frame Inter-chr q13.13 32.33 130653 ChimerSeq STARFusion Babiceanu et BCAS4-IGHM BCAS4 chr20 49457270 + IGHM chr14 106321322 - Exonic hg19 Non-Cancer ERR188155 3 4 Out-of-frame Inter-chr q13.13 q32.33 130654 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188421 12 0 Out-of-frame Intra-chr p11.2 130655 ChimerSeq STARFusion Babiceanu et VIM-KRT81 VIM chr10 17271729 + KRT81 chr12 52684890 - Exonic hg19 Non-Cancer ERR188107 4 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130656 ChimerSeq STARFusion Babiceanu et VIM-KRT86 VIM chr10 17271729 + KRT86 chr12 52696060 + Exonic hg19 Non-Cancer ERR188107 4 0 Out-of-frame Inter-chr p13 Tumor suppressor gene q13.13 130657 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188318 17 0 Out-of-frame Intra-chr p11.2 130658 ChimerSeq STARFusion Babiceanu et ZNF532-IGH@ ZNF532 chr18 56586459 + IGH@ chr14 106330472 - Exonic hg19 Non-Cancer ERR188318 4 0 Out-of-frame Inter-chr q21.32 Transcription factor 32.33 130659 ChimerSeq STARFusion Babiceanu et ZNF532-IGHJ4 ZNF532 chr18 56586459 + IGHJ4 chr14 106330472 - Exonic hg19 Non-Cancer ERR188318 4 0 Out-of-frame Inter-chr q21.32 Transcription factor 130660 ChimerSeq STARFusion Babiceanu et ZNF532-IGHM ZNF532 chr18 56586459 + IGHM chr14 106330472 - Exonic hg19 Non-Cancer ERR188318 4 0 Out-of-frame Inter-chr q21.32 Transcription factor q32.33 130661 ChimerSeq STARFusion Babiceanu et LINC00926-TTC33 LINC00926 chr15 57593122 + TTC33 chr5 40716600 - Exonic hg19 Non-Cancer ERR188134 2 0 Out-of-frame Inter-chr q21.3 p13.1 130662 ChimerSeq STARFusion Babiceanu et CCL22-RN7SL1 CCL22 chr16 57399560 + RN7SL1 chr14 50053367 + Exonic hg19 Non-Cancer ERR188084 3 10 Out-of-frame Inter-chr q21 q21.3 130663 ChimerSeq STARFusion Babiceanu et GCNT3-IGH@ GCNT3 chr15 59912667 + IGH@ chr14 106331650 - Exonic hg19 Non-Cancer ERR188394 6 0 Out-of-frame Inter-chr q22.2 32.33 130664 ChimerSeq STARFusion Babiceanu et GCNT3-IGHJ1 GCNT3 chr15 59912667 + IGHJ1 chr14 106331650 - Exonic hg19 Non-Cancer ERR188394 6 0 Out-of-frame Inter-chr q22.2 130665 ChimerSeq STARFusion Babiceanu et GCNT3-IGHM GCNT3 chr15 59912667 + IGHM chr14 106331650 - Exonic hg19 Non-Cancer ERR188394 6 0 Out-of-frame Inter-chr q22.2 q32.33 130666 ChimerSeq STARFusion Babiceanu et GCNT3-IGH@ GCNT3 chr15 59912666 + IGH@ chr14 106330058 - Exonic hg19 Non-Cancer ERR188394 4 0 Out-of-frame Inter-chr q22.2 32.33 130667 ChimerSeq STARFusion Babiceanu et GCNT3-IGHJ5 GCNT3 chr15 59912666 + IGHJ5 chr14 106330058 - Exonic hg19 Non-Cancer ERR188394 4 0 Out-of-frame Inter-chr q22.2 130668 ChimerSeq STARFusion Babiceanu et GCNT3-IGHM GCNT3 chr15 59912666 + IGHM chr14 106330058 - Exonic hg19 Non-Cancer ERR188394 4 0 Out-of-frame Inter-chr q22.2 q32.33 130669 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188149 9 0 Out-of-frame Intra-chr p11.2 130670 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188351 17 0 Out-of-frame Intra-chr p11.2 130671 ChimerSeq STARFusion Babiceanu et RN7SL704P-YWHAB RN7SL704P chr22 38628008 + YWHAB chr20 43536093 + Exonic hg19 Non-Cancer ERR188351 4 0 Out-of-frame Inter-chr q13.1 q13.12 130672 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188197 6 0 Out-of-frame Intra-chr p11.2 130673 ChimerSeq STARFusion Babiceanu et CCZ1-OR7E38P CCZ1 chr7 5941335 + OR7E38P chr7 97596289 - Exonic hg19 Non-Cancer ERR188197 3 0 Out-of-frame Intra-chr p22.1 q21.3 130674 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188392 12 0 Out-of-frame Intra-chr p11.2 130675 ChimerSeq STARFusion Babiceanu et DOC2GP-IGH@ DOC2GP chr11 67382578 - IGH@ chr14 106329458 - Exonic hg19 Non-Cancer ERR188392 9 0 Out-of-frame Inter-chr q13.2 32.33 130676 ChimerSeq STARFusion Babiceanu et DOC2GP-IGHJ6 DOC2GP chr11 67382578 - IGHJ6 chr14 106329458 - Exonic hg19 Non-Cancer ERR188392 9 0 Out-of-frame Inter-chr q13.2 130677 ChimerSeq STARFusion Babiceanu et DOC2GP-IGHM DOC2GP chr11 67382578 - IGHM chr14 106329458 - Exonic hg19 Non-Cancer ERR188392 9 0 Out-of-frame Inter-chr q13.2 q32.33 130678 ChimerSeq STARFusion Babiceanu et B2M-GAPDHP72 B2M chr15 45007863 + GAPDHP72 chr6 166478187 + Exonic hg19 Non-Cancer ERR188392 3 1 Out-of-frame Inter-chr Oncogene q27 130679 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188283 13 0 Out-of-frame Intra-chr p11.2 130680 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188069 12 0 Out-of-frame Intra-chr p11.2 130681 ChimerSeq STARFusion Babiceanu et RCC1-SERINC2 RCC1 chr1 28834672 + SERINC2 chr1 31905814 + Exonic hg19 Non-Cancer ERR188069 3 0 5'UTR-CDS Intra-chr p35.3 p35.2 130682 ChimerSeq STARFusion Babiceanu et SNHG3-SERINC2 SNHG3 chr1 28834672 + SERINC2 chr1 31905814 + Exonic hg19 Non-Cancer ERR188069 3 0 5'UTR-CDS Intra-chr p35.3 p35.2 130683 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188190 5 0 Out-of-frame Intra-chr p11.2 130684 ChimerSeq STARFusion Babiceanu et CSNK1E-HNRNPUL1 CSNK1E chr22 38794443 - HNRNPUL1 chr19 41774128 + Exonic hg19 Non-Cancer ERR188190 2 0 Out-of-frame Inter-chr q13.1 q13.2 130685 ChimerSeq STARFusion Babiceanu et H2AFY-TMEM232 H2AFY chr5 134724612 - TMEM232 chr5 109760617 - Exonic hg19 Non-Cancer ERR188190 2 0 Out-of-frame Intra-chr q31.1 q22.1 130686 ChimerSeq STARFusion Babiceanu et SLC25A12-STAG2 SLC25A12 chr2 172725191 - STAG2 chrX 123227868 + Exonic hg19 Non-Cancer ERR188190 2 0 Out-of-frame Inter-chr q31.1 q25 Oncogene 130687 ChimerSeq STARFusion Babiceanu et CCL22-RN7SL1 CCL22 chr16 57399560 + RN7SL1 chr14 50053367 + Exonic hg19 Non-Cancer ERR188425 5 18 Out-of-frame Inter-chr q21 q21.3 130688 ChimerSeq STARFusion Babiceanu et IGH@-PPP2R1A IGH@ chr14 106691671 - PPP2R1A chr19 52714651 + Exonic hg19 Non-Cancer ERR188425 7 1 Out-of-frame Inter-chr 32.33 q13.41 Oncogene 130689 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188425 6 0 Out-of-frame Intra-chr p11.2 130690 ChimerSeq STARFusion Babiceanu et MAPK12-IGH@ MAPK12 chr22 50691697 - IGH@ chr14 106330066 - Exonic hg19 Non-Cancer ERR188425 5 1 Out-of-frame Inter-chr q13.33 32.33 130691 ChimerSeq STARFusion Babiceanu et MAPK12-IGH@ MAPK12 chr22 50691697 - IGH@ chr14 106330467 - Exonic hg19 Non-Cancer ERR188425 5 1 Out-of-frame Inter-chr q13.33 32.33 130692 ChimerSeq STARFusion Babiceanu et MAPK12-IGHM MAPK12 chr22 50691697 - IGHM chr14 106330066 - Exonic hg19 Non-Cancer ERR188425 5 1 Out-of-frame Inter-chr q13.33 q32.33 130693 ChimerSeq STARFusion Babiceanu et MAPK12-IGHM MAPK12 chr22 50691697 - IGHM chr14 106330467 - Exonic hg19 Non-Cancer ERR188425 5 1 Out-of-frame Inter-chr q13.33 q32.33 130694 ChimerSeq STARFusion Babiceanu et HCG4P7-ACTB HCG4P7 chr6 29855902 - ACTB chr7 5567412 - Exonic hg19 Non-Cancer ERR188408 4 0 Out-of-frame Inter-chr p22.1 130695 ChimerSeq STARFusion Babiceanu et BCAS4-PCNA BCAS4 chr20 49457271 + PCNA chr20 5098235 - Exonic hg19 Non-Cancer ERR188408 3 2 Out-of-frame Intra-chr q13.13 p12.3 130696 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188447 31 0 Out-of-frame Intra-chr p11.2 130697 ChimerSeq STARFusion Babiceanu et FBXL3-IGH@ FBXL3 chr13 77579413 - IGH@ chr14 106330058 - Exonic hg19 Non-Cancer ERR188447 5 0 Out-of-frame Inter-chr q22.3 32.33 130698 ChimerSeq STARFusion Babiceanu et FBXL3-IGHJ5 FBXL3 chr13 77579413 - IGHJ5 chr14 106330058 - Exonic hg19 Non-Cancer ERR188447 5 0 Out-of-frame Inter-chr q22.3 130699 ChimerSeq STARFusion Babiceanu et FBXL3-IGHM FBXL3 chr13 77579413 - IGHM chr14 106330058 - Exonic hg19 Non-Cancer ERR188447 5 0 Out-of-frame Inter-chr q22.3 q32.33 130700 ChimerSeq STARFusion Babiceanu et NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR188440 19 0 Out-of-frame Intra-chr p11.2 130701 ChimerSeq STARFusion Babiceanu et IGH@-PNKD IGH@ chr14 106791003 - PNKD chr2 219135254 + Exonic hg19 Non-Cancer ERR188440 5 0 Out-of-frame Inter-chr 32.33 q35 130702 ChimerSeq STARFusion Babiceanu et IGH@-PNKD IGH@ chr14 107131031 - PNKD chr2 219135254 + Exonic hg19 Non-Cancer ERR188440 5 0 Out-of-frame Inter-chr 32.33 q35 130703 ChimerSeq STARFusion Babiceanu et BCAS4-IGH@ BCAS4 chr20 49457268 + IGH@ chr14 106321323 - Exonic hg19 Non-Cancer ERR188440 4 3 Out-of-frame Inter-chr q13.13 32.33 130704 ChimerSeq STARFusion Babiceanu et BCAS4-IGHM BCAS4 chr20 49457268 + IGHM chr14 106321323 - Exonic hg19 Non-Cancer ERR188440 4 3 Out-of-frame Inter-chr q13.13 q32.33 130705 ChimerSeq STARFusion Babiceanu et IGH@-PNKD IGH@ chr14 106815720 - PNKD chr2 219135254 + Exonic hg19 Non-Cancer ERR188440 4 0 Out-of-frame Inter-chr 32.33 q35 130706 ChimerSeq STARFusion 1000Genome CCNY-CREM CCNY chr10 35626135 + CREM chr10 35495823 + Exonic hg19 Non-Cancer ERR315414 22 4 In-Frame Intra-chr p11.21 p11.21 Tumor suppressor gene Transcription factor 130707 ChimerSeq STARFusion 1000Genome SERPINA1-ALB SERPINA1 chr14 94844764 - ALB chr4 74270029 + Exonic hg19 Non-Cancer ERR315414 3 39 Out-of-frame Inter-chr q32.13 q13.3 130708 ChimerSeq STARFusion 1000Genome ADPRHL2-DCXR ADPRHL2 chr1 36556921 + DCXR chr17 79994641 - Exonic hg19 Non-Cancer ERR315414 4 0 Out-of-frame Inter-chr p34.3 q25.3 130709 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315414 4 0 Out-of-frame Intra-chr p11.2 130710 ChimerSeq STARFusion 1000Genome ALB-DPYS ALB chr4 74270891 + DPYS chr8 105440248 - Exonic hg19 Non-Cancer ERR315414 3 2 Out-of-frame Inter-chr q13.3 q22.3 130711 ChimerSeq STARFusion 1000Genome ULK4P2-CHRNA7 ULK4P2 chr15 30878127 + CHRNA7 chr15 32446108 + Exonic hg19 Non-Cancer ERR315415 4 1 Out-of-frame Intra-chr q13.3 130712 ChimerSeq STARFusion 1000Genome C10orf112-PLXDC2 C10orf112 chr10 20079115 + PLXDC2 chr10 20290704 + Exonic hg19 Non-Cancer ERR315415 3 2 Out-of-frame Intra-chr p12.31 130713 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315417 5 0 Out-of-frame Intra-chr p11.2 130714 ChimerSeq STARFusion 1000Genome MAN2A1-UIMC1 MAN2A1 chr5 109178162 + UIMC1 chr5 176370489 - Exonic hg19 Non-Cancer ERR315417 2 0 In-Frame Intra-chr q21.3 q35.2 Tumor suppressor gene 130715 ChimerSeq STARFusion 1000Genome GATSL2-GTF2I GATSL2 chr7 74867229 - GTF2I chr7 74143124 + Exonic hg19 Non-Cancer ERR315410 2 0 Out-of-frame Intra-chr q11.23 Transcription factor 130716 ChimerSeq STARFusion 1000Genome KIAA1217-PDLIM1 KIAA1217 chr10 24508838 + PDLIM1 chr10 97031541 - Exonic hg19 Non-Cancer ERR315410 2 0 In-Frame Intra-chr p12.2 q23.33 130717 ChimerSeq STARFusion 1000Genome KRT13-MTATP6P1 KRT13 chr17 39657556 - MTATP6P1 chr1 569018 + Exonic hg19 Non-Cancer ERR315411 5 16 Out-of-frame Inter-chr q21.2 p36.33 130718 ChimerSeq STARFusion 1000Genome KRT13-MTATP8P1 KRT13 chr17 39657556 - MTATP8P1 chr1 569018 + Exonic hg19 Non-Cancer ERR315411 6 4 Out-of-frame Inter-chr q21.2 p36.33 130719 ChimerSeq STARFusion 1000Genome NDUFC2-MLK4 NDUFC2 chr11 77790655 - MLK4 chr1 233463631 + Exonic hg19 Non-Cancer ERR315411 4 0 Out-of-frame Inter-chr q14.1 TKL:MLK 130720 ChimerSeq STARFusion 1000Genome HSPB1-PPP1R13B HSPB1 chr7 75933507 + PPP1R13B chr14 104208451 - Exonic hg19 Non-Cancer ERR315411 3 0 Out-of-frame Inter-chr q11.23 q32.33 130721 ChimerSeq STARFusion 1000Genome RASGRP4-MAL RASGRP4 chr19 38910629 - MAL chr2 95713759 + Exonic hg19 Non-Cancer ERR315411 3 0 Out-of-frame Inter-chr q13.2 q11.1 Tumor suppressor gene 130722 ChimerSeq STARFusion 1000Genome RN7SL704P-YWHAB RN7SL704P chr22 38628008 + YWHAB chr20 43536093 + Exonic hg19 Non-Cancer ERR315411 3 0 Out-of-frame Inter-chr q13.1 q13.12 130723 ChimerSeq STARFusion 1000Genome RTN4-THSD7A RTN4 chr2 55199949 - THSD7A chr7 11411389 - Exonic hg19 Non-Cancer ERR315411 3 0 Out-of-frame Inter-chr p16.1 Tumor suppressor gene p21.3 130724 ChimerSeq STARFusion 1000Genome CEACAM6-CXCL17 CEACAM6 chr19 42255130 + CXCL17 chr19 42938008 - Exonic hg19 Non-Cancer ERR315411 2 0 5'UTR-CDS Intra-chr q13.2 q13.2 130725 ChimerSeq STARFusion 1000Genome KIAA0101-DUOX1 KIAA0101 chr15 64679646 - DUOX1 chr15 45453035 + Exonic hg19 Non-Cancer ERR315411 2 0 Out-of-frame Intra-chr q21.1 130726 ChimerSeq STARFusion 1000Genome TIMM23B-PARGP1 TIMM23B chr10 51387763 + PARGP1 chr10 51732772 + Exonic hg19 Non-Cancer ERR315412 17 12 Out-of-frame Intra-chr q11.23 q11.22 130727 ChimerSeq STARFusion 1000Genome RN7SL704P-YWHAB RN7SL704P chr22 38628008 + YWHAB chr20 43536093 + Exonic hg19 Non-Cancer ERR315413 3 0 Out-of-frame Inter-chr q13.1 q13.12 130728 ChimerSeq STARFusion 1000Genome EXOC6B-TRPC1 EXOC6B chr2 73052927 - TRPC1 chr3 142467100 + Exonic hg19 Non-Cancer ERR315413 2 0 Out-of-frame Inter-chr p13.2 q23 130729 ChimerSeq STARFusion 1000Genome LARGE-PPFIA1 LARGE chr22 33777905 - PPFIA1 chr11 70218321 + Exonic hg19 Non-Cancer ERR315413 2 0 Out-of-frame Inter-chr q13.3 130730 ChimerSeq STARFusion 1000Genome RYR2-MTR RYR2 chr1 237551483 + MTR chr1 237044055 + Exonic hg19 Non-Cancer ERR315413 2 0 5'UTR-CDS Intra-chr q43 q43 Oncogene 130731 ChimerSeq STARFusion 1000Genome PRB3-SMR3B PRB3 chr12 11420399 - SMR3B chr4 71255507 + Exonic hg19 Non-Cancer ERR315418 6 100 Out-of-frame Inter-chr p13.2 q13.3 130732 ChimerSeq STARFusion 1000Genome HTN3-STATH HTN3 chr4 70898970 + STATH chr4 70867906 + Exonic hg19 Non-Cancer ERR315418 8 58 3'UTR-3'UTR Intra-chr 130733 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083464 + SMR3B chr4 71255507 + Exonic hg19 Non-Cancer ERR315418 4 67 Out-of-frame Inter-chr q13.3 130734 ChimerSeq STARFusion 1000Genome HTN3-STATH HTN3 chr4 70894233 + STATH chr4 70864142 + Exonic hg19 Non-Cancer ERR315418 8 47 5'UTR-5'UTR Intra-chr 130735 ChimerSeq STARFusion 1000Genome PRB3-SMR3B PRB3 chr12 11420304 - SMR3B chr4 71255553 + Exonic hg19 Non-Cancer ERR315418 4 60 Out-of-frame Inter-chr p13.2 q13.3 130736 ChimerSeq STARFusion 1000Genome PRB3-SMR3B PRB3 chr12 11420185 - SMR3B chr4 71255546 + Exonic hg19 Non-Cancer ERR315418 3 60 Out-of-frame Inter-chr p13.2 q13.3 130737 ChimerSeq STARFusion 1000Genome PRB3-SMR3B PRB3 chr12 11420269 - SMR3B chr4 71255558 + Exonic hg19 Non-Cancer ERR315418 3 60 Out-of-frame Inter-chr p13.2 q13.3 130738 ChimerSeq STARFusion 1000Genome PRB3-SMR3B PRB3 chr12 11420588 - SMR3B chr4 71255471 + Exonic hg19 Non-Cancer ERR315418 3 60 Out-of-frame Inter-chr p13.2 q13.3 130739 ChimerSeq STARFusion 1000Genome PRB3-SMR3B PRB3 chr12 11420966 - SMR3B chr4 71255618 + Exonic hg19 Non-Cancer ERR315418 3 60 Out-of-frame Inter-chr p13.2 q13.3 130740 ChimerSeq STARFusion 1000Genome PRB3-SMR3B PRB3 chr12 11421028 - SMR3B chr4 71255550 + Exonic hg19 Non-Cancer ERR315418 3 60 Out-of-frame Inter-chr p13.2 q13.3 130741 ChimerSeq STARFusion 1000Genome PRB3-SMR3B PRB3 chr12 11421033 - SMR3B chr4 71255467 + Exonic hg19 Non-Cancer ERR315418 3 60 Out-of-frame Inter-chr p13.2 q13.3 130742 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083416 + SMR3B chr4 71255471 + Exonic hg19 Non-Cancer ERR315418 4 48 Out-of-frame Inter-chr q13.3 130743 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083467 + SMR3B chr4 71255684 + Exonic hg19 Non-Cancer ERR315418 3 48 Out-of-frame Inter-chr q13.3 130744 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083470 + SMR3B chr4 71255558 + Exonic hg19 Non-Cancer ERR315418 3 48 Out-of-frame Inter-chr q13.3 130745 ChimerSeq STARFusion 1000Genome HTN3-STATH HTN3 chr4 70894233 + STATH chr4 70864140 + Exonic hg19 Non-Cancer ERR315418 2 47 5'UTR-5'UTR Intra-chr 130746 ChimerSeq STARFusion 1000Genome SMR3B-PRH2 SMR3B chr4 71255566 + PRH2 chr12 11083408 + Exonic hg19 Non-Cancer ERR315418 7 23 Out-of-frame Inter-chr q13.3 130747 ChimerSeq STARFusion 1000Genome SMR3B-PRR4 SMR3B chr4 71255566 + PRR4 chr12 11035087 - Exonic hg19 Non-Cancer ERR315418 7 19 Out-of-frame Inter-chr q13.3 130748 ChimerSeq STARFusion 1000Genome SMR3B-PRH2 SMR3B chr4 71255556 + PRH2 chr12 11083401 + Exonic hg19 Non-Cancer ERR315418 4 21 Out-of-frame Inter-chr q13.3 130749 ChimerSeq STARFusion 1000Genome PRB1-TTN PRB1 chr12 11506213 - TTN chr2 179405099 - Exonic hg19 Non-Cancer ERR315418 9 0 Out-of-frame Inter-chr Tumor suppressor gene q31.2 CAMK:MLCK 130750 ChimerSeq STARFusion 1000Genome PRB2-TTN PRB2 chr12 11506213 - TTN chr2 179405099 - Exonic hg19 Non-Cancer ERR315418 8 0 Out-of-frame Inter-chr p13.2 q31.2 CAMK:MLCK 130751 ChimerSeq STARFusion 1000Genome PRB3-SRPK2 PRB3 chr12 11420105 - SRPK2 chr7 104946916 - Exonic hg19 Non-Cancer ERR315418 8 0 Out-of-frame Inter-chr p13.2 q22.3 CMGC:SRPK 130752 ChimerSeq STARFusion 1000Genome SMR3B-PRH2 SMR3B chr4 71255470 + PRH2 chr12 11083417 + Exonic hg19 Non-Cancer ERR315418 3 16 Out-of-frame Inter-chr q13.3 130753 ChimerSeq STARFusion 1000Genome PRB3-CLCN4 PRB3 chr12 11420930 - CLCN4 chrX 10204291 + Exonic hg19 Non-Cancer ERR315418 3 0 Out-of-frame Inter-chr p13.2 p22.2 130754 ChimerSeq STARFusion 1000Genome SUN2-C1orf63 SUN2 chr22 39141689 - C1orf63 chr1 25580428 - Exonic hg19 Non-Cancer ERR315418 2 0 Out-of-frame Inter-chr q13.1 130755 ChimerSeq STARFusion 1000Genome MLLT6-IGH@ MLLT6 chr17 36884566 + IGH@ chr14 106175004 - Exonic hg19 Non-Cancer ERR315419 4 1 Out-of-frame Inter-chr q12 32.33 130756 ChimerSeq STARFusion 1000Genome MLLT6-IGHA1 MLLT6 chr17 36884566 + IGHA1 chr14 106175004 - Exonic hg19 Non-Cancer ERR315419 4 1 Out-of-frame Inter-chr q12 130757 ChimerSeq STARFusion 1000Genome RCC1-MARK3 RCC1 chr1 28834672 + MARK3 chr14 103871413 + Exonic hg19 Non-Cancer ERR315419 2 0 5'UTR-CDS Inter-chr p35.3 q32.32 CAMK:CAMKL 130758 ChimerSeq STARFusion 1000Genome SLC38A1-PICALM SLC38A1 chr12 46662648 - PICALM chr11 85742653 - Exonic hg19 Non-Cancer ERR315419 2 0 5'UTR-5'UTR Inter-chr q13.11 q14.2 130759 ChimerSeq STARFusion 1000Genome SNHG3-MARK3 SNHG3 chr1 28834672 + MARK3 chr14 103871413 + Exonic hg19 Non-Cancer ERR315419 2 0 5'UTR-CDS Inter-chr p35.3 q32.32 CAMK:CAMKL 130760 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315469 5 0 Out-of-frame Intra-chr p11.2 130761 ChimerSeq STARFusion 1000Genome YWHAZ-AZIN1 YWHAZ chr8 101965497 - AZIN1 chr8 103870378 - Exonic hg19 Non-Cancer ERR315469 4 0 5'UTR-5'UTR Intra-chr q22.3 q22.3 130762 ChimerSeq STARFusion 1000Genome ITGB2-SUMO3 ITGB2 chr21 46340736 - SUMO3 chr21 46234019 - Exonic hg19 Non-Cancer ERR315469 3 0 5'UTR-CDS Intra-chr q22.3 Oncogene q22.3 130763 ChimerSeq STARFusion 1000Genome HIF1A-SF3B1 HIF1A chr14 62203827 + SF3B1 chr2 198283312 - Exonic hg19 Non-Cancer ERR315469 2 1 In-Frame Inter-chr q23.2 Oncogene Tumor suppressor gene Transcription factor q33.1 Oncogene 130764 ChimerSeq STARFusion 1000Genome ACTB-PLP2 ACTB chr7 5570155 - PLP2 chrX 49029476 + Exonic hg19 Non-Cancer ERR315469 2 0 Out-of-frame Inter-chr p22.1 p11.23 130765 ChimerSeq STARFusion 1000Genome ACTN4-HNRNPUL1 ACTN4 chr19 39138547 + HNRNPUL1 chr19 41774128 + Exonic hg19 Non-Cancer ERR315469 2 0 Out-of-frame Intra-chr q13.2 130766 ChimerSeq STARFusion 1000Genome ARID3A-RNF126 ARID3A chr19 929896 + RNF126 chr19 652884 - Exonic hg19 Non-Cancer ERR315469 2 0 Out-of-frame Intra-chr p13.3 Transcription factor p13.3 130767 ChimerSeq STARFusion 1000Genome BAZ2B-CREB1 BAZ2B chr2 160472753 - CREB1 chr2 208461638 + Exonic hg19 Non-Cancer ERR315469 2 0 Out-of-frame Intra-chr q24.2 Transcription factor q33.3 Oncogene Transcription factor 130768 ChimerSeq STARFusion 1000Genome BPI-HNRNPD BPI chr20 36940339 + HNRNPD chr4 83292737 - Exonic hg19 Non-Cancer ERR315469 2 0 Out-of-frame Inter-chr q11.23 q21.22 130769 ChimerSeq STARFusion 1000Genome BRI3-FAM45A BRI3 chr7 97911765 + FAM45A chr10 120867480 + Exonic hg19 Non-Cancer ERR315469 2 0 Out-of-frame Inter-chr q21.3 q26.11 130770 ChimerSeq STARFusion 1000Genome CDKL5-CHD2 CDKL5 chrX 18443815 + CHD2 chr15 93428745 + Exonic hg19 Non-Cancer ERR315469 2 0 5'UTR-5'UTR Inter-chr p22.13 CMGC:CDKL q26.1 130771 ChimerSeq STARFusion 1000Genome DDX5-PDCD6 DDX5 chr17 62502873 - PDCD6 chr5 304292 + Exonic hg19 Non-Cancer ERR315469 2 0 Out-of-frame Inter-chr q23.3 p15.33 130772 ChimerSeq STARFusion 1000Genome DDX5-SET DDX5 chr17 62502194 - SET chr9 131453449 + Exonic hg19 Non-Cancer ERR315469 2 0 Out-of-frame Inter-chr q23.3 q34.11 130773 ChimerSeq STARFusion 1000Genome DMXL2-ZNF280D DMXL2 chr15 51755576 - ZNF280D chr15 56927448 - Exonic hg19 Non-Cancer ERR315469 2 0 In-Frame Intra-chr q21.2 q21.3 Transcription factor 130774 ChimerSeq STARFusion 1000Genome DNAJC25-MARS DNAJC25 chr9 114394023 + MARS chr12 57905481 + Exonic hg19 Non-Cancer ERR315469 2 0 In-Frame Inter-chr q31.3 q13.3 130775 ChimerSeq STARFusion 1000Genome DYSF-CCNG2 DYSF chr2 71797871 + CCNG2 chr4 78079686 + Exonic hg19 Non-Cancer ERR315469 2 0 In-Frame Inter-chr p13.2 q21.1 130776 ChimerSeq STARFusion 1000Genome ELANE-PTBP1 ELANE chr19 852395 + PTBP1 chr19 799413 + Exonic hg19 Non-Cancer ERR315469 2 0 Out-of-frame Intra-chr p13.3 p13.3 130777 ChimerSeq STARFusion 1000Genome ELANE-PTBP1 ELANE chr19 852395 + PTBP1 chr19 803561 + Exonic hg19 Non-Cancer ERR315469 2 0 Out-of-frame Intra-chr p13.3 p13.3 130778 ChimerSeq STARFusion 1000Genome FNIP1-PDE4B FNIP1 chr5 131006156 - PDE4B chr1 66821210 + Exonic hg19 Non-Cancer ERR315469 2 0 Out-of-frame Inter-chr q31.1 p31.3 130779 ChimerSeq STARFusion 1000Genome FUS-KCTD5 FUS chr16 31191548 + KCTD5 chr16 2757299 + Exonic hg19 Non-Cancer ERR315469 2 0 Out-of-frame Intra-chr p11.2 Tumor suppressor gene p13.3 130780 ChimerSeq STARFusion 1000Genome G3BP2-SIAH1 G3BP2 chr4 76598392 - SIAH1 chr16 48396341 - Exonic hg19 Non-Cancer ERR315469 2 0 5'UTR-5'UTR Inter-chr q21.1 q12.1 Tumor suppressor gene 130781 ChimerSeq STARFusion 1000Genome HIVEP1-YBX3 HIVEP1 chr6 12015901 + YBX3 chr12 10862713 - Exonic hg19 Non-Cancer ERR315469 2 0 Out-of-frame Inter-chr p24.1 Tumor suppressor gene Transcription factor p13.2 Transcription factor 130782 ChimerSeq STARFusion 1000Genome IL4I1-ELMSAN1 IL4I1 chr19 50397525 - ELMSAN1 chr14 74206958 - Exonic hg19 Non-Cancer ERR315469 2 0 Out-of-frame Inter-chr q13.33 q24.3 130783 ChimerSeq STARFusion 1000Genome JARID2-CHD2 JARID2 chr6 15246815 + CHD2 chr15 93428745 + Exonic hg19 Non-Cancer ERR315469 2 0 CDS-5'UTR Inter-chr p22.3 q26.1 130784 ChimerSeq STARFusion 1000Genome KDM4B-KLF11 KDM4B chr19 5041262 + KLF11 chr2 10186277 + Exonic hg19 Non-Cancer ERR315469 2 0 In-Frame Inter-chr p13.3 p25.1 Transcription factor 130785 ChimerSeq STARFusion 1000Genome KMT2E-AHCTF1 KMT2E chr7 104654982 + AHCTF1 chr1 247081679 - Exonic hg19 Non-Cancer ERR315469 2 0 Out-of-frame Inter-chr q22.3 q44 Transcription factor 130786 ChimerSeq STARFusion 1000Genome LINC00623-USP22 LINC00623 chr1 144340526 - USP22 chr17 20931987 - Exonic hg19 Non-Cancer ERR315469 2 0 Out-of-frame Inter-chr p11.2 p11.2 130787 ChimerSeq STARFusion 1000Genome NKTR-ULK4 NKTR chr3 42642556 + ULK4 chr3 41977432 - Exonic hg19 Non-Cancer ERR315469 2 0 In-Frame Intra-chr p22.1 p22.1 Other:ULK 130788 ChimerSeq STARFusion 1000Genome NRBP1-CSNK1D NRBP1 chr2 27651598 + CSNK1D chr17 80210480 - Exonic hg19 Non-Cancer ERR315469 2 0 5'UTR-CDS Inter-chr p23.3 Other:NRBP Tumor suppressor gene q25.3 130789 ChimerSeq STARFusion 1000Genome OAZ1-GAPDH OAZ1 chr19 2269743 + GAPDH chr12 6645660 + Exonic hg19 Non-Cancer ERR315469 2 0 In-Frame Inter-chr p13.3 p13.31 130790 ChimerSeq STARFusion 1000Genome PFKFB3-GPAA1 PFKFB3 chr10 6245299 + GPAA1 chr8 145138617 + Exonic hg19 Non-Cancer ERR315469 2 0 Out-of-frame Inter-chr p15.1 q24.3 130791 ChimerSeq STARFusion 1000Genome PIM3-RPL7A PIM3 chr22 50355459 + RPL7A chr9 136215777 + Exonic hg19 Non-Cancer ERR315469 2 0 Out-of-frame Inter-chr q13.33 CAMK:PIM 130792 ChimerSeq STARFusion 1000Genome PIM3-UBB PIM3 chr22 50355459 + UBB chr17 16285216 + Exonic hg19 Non-Cancer ERR315469 2 0 CDS-5'UTR Inter-chr q13.33 CAMK:PIM p11.2 130793 ChimerSeq STARFusion 1000Genome RBM38-GSPT1 RBM38 chr20 55968389 + GSPT1 chr16 11991892 - Exonic hg19 Non-Cancer ERR315469 2 0 Out-of-frame Inter-chr q13.31 Tumor suppressor gene p13.13 130794 ChimerSeq STARFusion 1000Genome RIN3-ADM RIN3 chr14 93151495 + ADM chr11 10327227 + Exonic hg19 Non-Cancer ERR315469 2 0 CDS-5'UTR Inter-chr q32.12 p15.4 130795 ChimerSeq STARFusion 1000Genome RUNX1-ZNF148 RUNX1 chr21 36265222 - ZNF148 chr3 125042288 - Exonic hg19 Non-Cancer ERR315469 2 0 5'UTR-5'UTR Inter-chr q22.12 Oncogene Tumor suppressor gene Transcription factor q21.2 Transcription factor 130796 ChimerSeq STARFusion 1000Genome SEMA6A-FEM1C SEMA6A chr5 115909881 - FEM1C chr5 114879380 - Exonic hg19 Non-Cancer ERR315469 2 0 5'UTR-5'UTR Intra-chr q23.1 q22.3 130797 ChimerSeq STARFusion 1000Genome SIN3A-RPA2 SIN3A chr15 75699396 - RPA2 chr1 28223632 - Exonic hg19 Non-Cancer ERR315469 2 0 In-Frame Inter-chr q24.2 p35.3 130798 ChimerSeq STARFusion 1000Genome SOGA2-TOM1 SOGA2 chr18 8720494 + TOM1 chr22 35729397 + Exonic hg19 Non-Cancer ERR315469 2 0 In-Frame Inter-chr q12.3 130799 ChimerSeq STARFusion 1000Genome SSBP3-NFIA SSBP3 chr1 54867534 - NFIA chr1 61553821 + Exonic hg19 Non-Cancer ERR315469 2 0 Out-of-frame Intra-chr p32.3 p31.3 Transcription factor 130800 ChimerSeq STARFusion 1000Genome SYNE1-MED23 SYNE1 chr6 152497529 - MED23 chr6 131924344 - Exonic hg19 Non-Cancer ERR315469 2 0 Out-of-frame Intra-chr q25.2 Oncogene q23.2 130801 ChimerSeq STARFusion 1000Genome TBC1D2B-B2M TBC1D2B chr15 78293961 - B2M chr15 45007621 + Exonic hg19 Non-Cancer ERR315469 2 0 Out-of-frame Intra-chr q25.1 Oncogene 130802 ChimerSeq STARFusion 1000Genome TMEM194B-AASDHPPT TMEM194B chr2 191389989 - AASDHPPT chr11 105950194 + Exonic hg19 Non-Cancer ERR315469 2 0 Out-of-frame Inter-chr q22.3 130803 ChimerSeq STARFusion 1000Genome TNKS-LYN TNKS chr8 9473187 + LYN chr8 56854414 + Exonic hg19 Non-Cancer ERR315469 2 0 CDS-5'UTR Intra-chr p23.1 q12.1 TK:Src 130804 ChimerSeq STARFusion 1000Genome TRPM2-ZNF511 TRPM2 chr21 45784165 + ZNF511 chr10 135126292 + Exonic hg19 Non-Cancer ERR315469 2 0 Out-of-frame Inter-chr q22.3 Tumor suppressor gene q26.3 Transcription factor 130805 ChimerSeq STARFusion 1000Genome USP37-EDEM3 USP37 chr2 219418276 - EDEM3 chr1 184681011 - Exonic hg19 Non-Cancer ERR315469 2 0 Out-of-frame Inter-chr q35 q25.3 130806 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315494 3 0 Out-of-frame Intra-chr p11.2 130807 ChimerSeq STARFusion 1000Genome ASXL2-WDR33 ASXL2 chr2 26022254 - WDR33 chr2 128467430 - Exonic hg19 Non-Cancer ERR315494 2 0 Out-of-frame Intra-chr p23.3 q14.3 130808 ChimerSeq STARFusion 1000Genome FTCD-GET4 FTCD chr21 47562023 - GET4 chr7 925693 + Exonic hg19 Non-Cancer ERR315494 2 0 Out-of-frame Inter-chr p22.3 130809 ChimerSeq STARFusion 1000Genome FTCD-SUN1 FTCD chr21 47562023 - SUN1 chr7 925693 + Exonic hg19 Non-Cancer ERR315494 2 0 Out-of-frame Inter-chr p22.3 130810 ChimerSeq STARFusion 1000Genome RN7SL704P-YWHAB RN7SL704P chr22 38628008 + YWHAB chr20 43536093 + Exonic hg19 Non-Cancer ERR315495 5 0 Out-of-frame Inter-chr q13.1 q13.12 130811 ChimerSeq STARFusion 1000Genome TEP1-KLHL33 TEP1 chr14 20881530 - KLHL33 chr14 20898878 - Exonic hg19 Non-Cancer ERR315495 2 1 5'UTR-5'UTR Intra-chr q11.2 Tumor suppressor gene q11.2 130812 ChimerSeq STARFusion 1000Genome CHRDL1-GLUD1 CHRDL1 chrX 110002889 - GLUD1 chr10 88827914 - Exonic hg19 Non-Cancer ERR315495 2 0 In-Frame Inter-chr q23 q23.2 130813 ChimerSeq STARFusion 1000Genome LRP12-PPP2R2C LRP12 chr8 105601047 - PPP2R2C chr4 6382821 - Exonic hg19 Non-Cancer ERR315495 2 0 In-Frame Inter-chr q22.3 p16.1 Tumor suppressor gene 130814 ChimerSeq STARFusion 1000Genome SKAP1-ARID2 SKAP1 chr17 46423267 - ARID2 chr12 46298717 + Exonic hg19 Non-Cancer ERR315495 2 0 Out-of-frame Inter-chr q21.32 q12 Oncogene Tumor suppressor gene Transcription factor 130815 ChimerSeq STARFusion 1000Genome UBE2N-DCN UBE2N chr12 93835631 - DCN chr12 91558494 - Exonic hg19 Non-Cancer ERR315495 2 0 Out-of-frame Intra-chr q22 q21.33 Tumor suppressor gene 130816 ChimerSeq STARFusion 1000Genome CYCS-DNAJB6 CYCS chr7 25164819 - DNAJB6 chr7 157160067 + Exonic hg19 Non-Cancer ERR315490 2 0 Out-of-frame Intra-chr p15.3 q36.3 130817 ChimerSeq STARFusion 1000Genome LRRC37B-LPP LRRC37B chr17 30335151 + LPP chr3 188326949 + Exonic hg19 Non-Cancer ERR315490 2 0 Out-of-frame Inter-chr q11.2 q27.3 Oncogene 130818 ChimerSeq STARFusion 1000Genome MARK3-EXOSC10 MARK3 chr14 103928798 + EXOSC10 chr1 11137708 - Exonic hg19 Non-Cancer ERR315491 2 0 In-Frame Inter-chr q32.32 CAMK:CAMKL p36.22 130819 ChimerSeq STARFusion 1000Genome ADAMDEC1-RNF13 ADAMDEC1 chr8 24242105 + RNF13 chr3 149638921 + Exonic hg19 Non-Cancer ERR315493 2 0 Out-of-frame Inter-chr p21.2 q25.1 130820 ChimerSeq STARFusion 1000Genome ATXN10-CERK ATXN10 chr22 46125470 + CERK chr22 47108190 - Exonic hg19 Non-Cancer ERR315493 2 0 Out-of-frame Intra-chr q13.31 q13.31 130821 ChimerSeq STARFusion 1000Genome IFI16-RFWD2 IFI16 chr1 158979951 + RFWD2 chr1 175957548 - Exonic hg19 Non-Cancer ERR315493 2 0 5'UTR-CDS Intra-chr q23.1 Tumor suppressor gene q25.2 Tumor suppressor gene 130822 ChimerSeq STARFusion 1000Genome DOT1L-DYNLL2 DOT1L chr19 2220221 + DYNLL2 chr17 56164443 + Exonic hg19 Non-Cancer ERR315393 2 0 CDS-5'UTR Inter-chr p13.3 Oncogene Transcription factor q22 130823 ChimerSeq STARFusion 1000Genome FAM53B-TSPAN3 FAM53B chr10 126430997 - TSPAN3 chr15 77348597 - Exonic hg19 Non-Cancer ERR315393 2 0 5'UTR-CDS Inter-chr q26.13 q24.3 130824 ChimerSeq STARFusion 1000Genome HDAC1-UBE2D2 HDAC1 chr1 32768334 + UBE2D2 chr5 138979957 + Exonic hg19 Non-Cancer ERR315393 2 0 In-Frame Inter-chr p35.2 Tumor suppressor gene q31.2 130825 ChimerSeq STARFusion 1000Genome FAM53B-MTHFS FAM53B chr10 126384727 - MTHFS chr15 80137784 - Exonic hg19 Non-Cancer ERR315390 2 0 In-Frame Inter-chr q26.13 q25.1 130826 ChimerSeq STARFusion 1000Genome HSPA5-RIC8A HSPA5 chr9 128001044 - RIC8A chr11 214317 + Exonic hg19 Non-Cancer ERR315397 4 0 Out-of-frame Inter-chr q33.3 p15.5 130827 ChimerSeq STARFusion 1000Genome NDUFA12-SCYL2 NDUFA12 chr12 95396515 - SCYL2 chr12 100704822 + Exonic hg19 Non-Cancer ERR315397 2 0 Out-of-frame Intra-chr q22 q23.1 Other:SCY1 130828 ChimerSeq STARFusion 1000Genome DEFA1-HBB DEFA1 chr8 6835310 - HBB chr11 5248268 - Exonic hg19 Non-Cancer ERR315396 4 83 Out-of-frame Inter-chr p23.1 p15.4 130829 ChimerSeq STARFusion 1000Genome LYZ-RN7SL1 LYZ chr12 69747364 + RN7SL1 chr14 50053340 + Exonic hg19 Non-Cancer ERR315396 4 11 Out-of-frame Inter-chr q15 q21.3 130830 ChimerSeq STARFusion 1000Genome SLC25A37-LYZ SLC25A37 chr8 23431705 + LYZ chr12 69747553 + Exonic hg19 Non-Cancer ERR315396 3 3 Out-of-frame Inter-chr p21.2 q15 130831 ChimerSeq STARFusion 1000Genome FP15737-LYZ FP15737 chr8 23431705 + LYZ chr12 69747553 + Exonic hg19 Non-Cancer ERR315396 3 2 Out-of-frame Inter-chr q15 130832 ChimerSeq STARFusion 1000Genome CXCR4-PTMA CXCR4 chr2 136875616 - PTMA chr2 232576058 + Exonic hg19 Non-Cancer ERR315396 3 0 Out-of-frame Intra-chr q22.1 q37.1 130833 ChimerSeq STARFusion 1000Genome MAD1L1-MAFK MAD1L1 chr7 1937836 - MAFK chr7 1578785 + Exonic hg19 Non-Cancer ERR315396 3 0 Out-of-frame Intra-chr p22.3 Tumor suppressor gene p22.3 Transcription factor 130834 ChimerSeq STARFusion 1000Genome BSG-PTBP1 BSG chr19 572701 + PTBP1 chr19 807869 + Exonic hg19 Non-Cancer ERR315396 2 1 Out-of-frame Intra-chr p13.3 p13.3 130835 ChimerSeq STARFusion 1000Genome KLF10-AZIN1 KLF10 chr8 103667794 - AZIN1 chr8 103870378 - Exonic hg19 Non-Cancer ERR315396 2 1 5'UTR-5'UTR Intra-chr q22.3 Tumor suppressor gene Transcription factor q22.3 130836 ChimerSeq STARFusion 1000Genome ARF1-HMGB1 ARF1 chr1 228270466 + HMGB1 chr13 31037831 - Exonic hg19 Non-Cancer ERR315396 2 0 5'UTR-5'UTR Inter-chr q42.13 Tumor suppressor gene q12.3 130837 ChimerSeq STARFusion 1000Genome ARF1-IFNGR1 ARF1 chr1 228270466 + IFNGR1 chr6 137528214 - Exonic hg19 Non-Cancer ERR315396 2 0 5'UTR-CDS Inter-chr q42.13 Tumor suppressor gene q23.3 130838 ChimerSeq STARFusion 1000Genome ATAD2-DLGAP5 ATAD2 chr8 124392769 - DLGAP5 chr14 55615191 - Exonic hg19 Non-Cancer ERR315396 2 0 Out-of-frame Inter-chr q24.13 q22.3 130839 ChimerSeq STARFusion 1000Genome ATXN1-EEF1A1 ATXN1 chr6 16761529 - EEF1A1 chr6 74229779 - Exonic hg19 Non-Cancer ERR315396 2 0 5'UTR-5'UTR Intra-chr p22.3 q13 Tumor suppressor gene 130840 ChimerSeq STARFusion 1000Genome CHPT1-DENND4A CHPT1 chr12 102108423 + DENND4A chr15 65954325 - Exonic hg19 Non-Cancer ERR315396 2 0 Out-of-frame Inter-chr q23.2 q22.31 130841 ChimerSeq STARFusion 1000Genome DHX9-GLUL DHX9 chr1 182808591 + GLUL chr1 182357885 - Exonic hg19 Non-Cancer ERR315396 2 0 5'UTR-5'UTR Intra-chr q25.3 q25.3 130842 ChimerSeq STARFusion 1000Genome DHX9-IVNS1ABP DHX9 chr1 182808591 + IVNS1ABP chr1 185280454 - Exonic hg19 Non-Cancer ERR315396 2 0 5'UTR-5'UTR Intra-chr q25.3 q25.3 130843 ChimerSeq STARFusion 1000Genome ELANE-BSG ELANE chr19 852395 + BSG chr19 579500 + Exonic hg19 Non-Cancer ERR315396 2 0 In-Frame Intra-chr p13.3 p13.3 130844 ChimerSeq STARFusion 1000Genome EPN2-UBB EPN2 chr17 19140844 + UBB chr17 16285216 + Exonic hg19 Non-Cancer ERR315396 2 0 5'UTR-5'UTR Intra-chr p11.2 p11.2 130845 ChimerSeq STARFusion 1000Genome HMGN2-DDX5 HMGN2 chr1 26799118 + DDX5 chr17 62500960 - Exonic hg19 Non-Cancer ERR315396 2 0 Out-of-frame Inter-chr p36.11 q23.3 130846 ChimerSeq STARFusion 1000Genome HMGN2-HNRNPK HMGN2 chr1 26799118 + HNRNPK chr9 86593367 - Exonic hg19 Non-Cancer ERR315396 2 0 CDS-5'UTR Inter-chr p36.11 q21.32 130847 ChimerSeq STARFusion 1000Genome ITGB2-SUMO3 ITGB2 chr21 46340736 - SUMO3 chr21 46234019 - Exonic hg19 Non-Cancer ERR315396 2 0 5'UTR-CDS Intra-chr q22.3 Oncogene q22.3 130848 ChimerSeq STARFusion 1000Genome KIFC1-RNH1 KIFC1 chr6 33374652 + RNH1 chr11 502181 - Exonic hg19 Non-Cancer ERR315396 2 0 3'UTR-5'UTR Inter-chr Tumor suppressor gene 130849 ChimerSeq STARFusion 1000Genome MAEA-CTBP1 MAEA chr4 1309388 + CTBP1 chr4 1232125 - Exonic hg19 Non-Cancer ERR315396 2 0 Out-of-frame Intra-chr p16.3 p16.3 130850 ChimerSeq STARFusion 1000Genome MED25-UBB MED25 chr19 50322553 + UBB chr17 16285216 + Exonic hg19 Non-Cancer ERR315396 2 0 CDS-5'UTR Inter-chr q13.33 p11.2 130851 ChimerSeq STARFusion 1000Genome MGRN1-NFATC1 MGRN1 chr16 4733933 + NFATC1 chr18 77227450 + Exonic hg19 Non-Cancer ERR315396 2 0 Out-of-frame Inter-chr p13.3 q23 Transcription factor 130852 ChimerSeq STARFusion 1000Genome MOB3A-CDYL MOB3A chr19 2085174 - CDYL chr6 4954132 + Exonic hg19 Non-Cancer ERR315396 2 0 Out-of-frame Inter-chr p13.3 p25.1 130853 ChimerSeq STARFusion 1000Genome PRC1-USP33 PRC1 chr15 91537637 - USP33 chr1 78163616 - Exonic hg19 Non-Cancer ERR315396 2 0 Out-of-frame Inter-chr q26.1 p31.1 Tumor suppressor gene 130854 ChimerSeq STARFusion 1000Genome PTBP1-ICOSLG PTBP1 chr19 799443 + ICOSLG chr21 45658371 - Exonic hg19 Non-Cancer ERR315396 2 0 Out-of-frame Inter-chr p13.3 q22.3 130855 ChimerSeq STARFusion 1000Genome SETD5-PPM1A SETD5 chr3 9516840 + PPM1A chr14 60749402 + Exonic hg19 Non-Cancer ERR315396 2 0 Out-of-frame Inter-chr p25.3 q23.1 Tumor suppressor gene 130856 ChimerSeq STARFusion 1000Genome SUMO2-RBM38 SUMO2 chr17 73178909 - RBM38 chr20 55982599 + Exonic hg19 Non-Cancer ERR315396 2 0 Out-of-frame Inter-chr q25.1 q13.31 Tumor suppressor gene 130857 ChimerSeq STARFusion 1000Genome TEX2-DDX5 TEX2 chr17 62340528 - DDX5 chr17 62500960 - Exonic hg19 Non-Cancer ERR315396 2 0 5'UTR-CDS Intra-chr q23.3 q23.3 130858 ChimerSeq STARFusion 1000Genome TTYH3-MAFK TTYH3 chr7 2671912 + MAFK chr7 1578785 + Exonic hg19 Non-Cancer ERR315396 2 0 CDS-5'UTR Intra-chr p22.3 p22.3 Transcription factor 130859 ChimerSeq STARFusion 1000Genome ULK4-TRAK1 ULK4 chr3 41996114 - TRAK1 chr3 42128596 + Exonic hg19 Non-Cancer ERR315396 2 0 Out-of-frame Intra-chr p22.1 Other:ULK p22.1 130860 ChimerSeq STARFusion 1000Genome UNKL-UBE2I UNKL chr16 1440633 - UBE2I chr16 1365655 + Exonic hg19 Non-Cancer ERR315396 2 0 Out-of-frame Intra-chr p13.3 p13.3 130861 ChimerSeq STARFusion 1000Genome YPEL5-SRSF7 YPEL5 chr2 30369928 + SRSF7 chr2 38977336 - Exonic hg19 Non-Cancer ERR315396 2 0 5'UTR-CDS Intra-chr p23.1 p22.1 130862 ChimerSeq STARFusion 1000Genome ZEB2-MGAT4A ZEB2 chr2 145274845 - MGAT4A chr2 99343030 - Exonic hg19 Non-Cancer ERR315396 2 0 CDS-5'UTR Intra-chr q22.3 Transcription factor q11.2 130863 ChimerSeq STARFusion 1000Genome HBB-EEF1A1 HBB chr11 5248160 - EEF1A1 chr6 74228927 - Exonic hg19 Non-Cancer ERR315395 3 27 Out-of-frame Inter-chr p15.4 q13 Tumor suppressor gene 130864 ChimerSeq STARFusion 1000Genome E2F4-RPL14 E2F4 chr16 67229785 + RPL14 chr3 40503542 + Exonic hg19 Non-Cancer ERR315395 6 2 Out-of-frame Inter-chr q22.1 Transcription factor p22.1 130865 ChimerSeq STARFusion 1000Genome LYZ-FP15737 LYZ chr12 69747290 + FP15737 chr8 23431958 + Exonic hg19 Non-Cancer ERR315395 4 3 Out-of-frame Inter-chr q15 130866 ChimerSeq STARFusion 1000Genome LYZ-SLC25A37 LYZ chr12 69747290 + SLC25A37 chr8 23431958 + Exonic hg19 Non-Cancer ERR315395 4 3 Out-of-frame Inter-chr q15 p21.2 130867 ChimerSeq STARFusion 1000Genome HBB-RPLP1 HBB chr11 5248177 - RPLP1 chr15 69745218 + Exonic hg19 Non-Cancer ERR315395 3 6 Out-of-frame Inter-chr p15.4 q23 130868 ChimerSeq STARFusion 1000Genome E2F4-RPL14 E2F4 chr16 67229791 + RPL14 chr3 40503548 + Exonic hg19 Non-Cancer ERR315395 4 1 Out-of-frame Inter-chr q22.1 Transcription factor p22.1 130869 ChimerSeq STARFusion 1000Genome ITGB2-SUMO3 ITGB2 chr21 46340736 - SUMO3 chr21 46234019 - Exonic hg19 Non-Cancer ERR315395 4 0 5'UTR-CDS Intra-chr q22.3 Oncogene q22.3 130870 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315395 4 0 Out-of-frame Intra-chr p11.2 130871 ChimerSeq STARFusion 1000Genome SS18L1-ADRM1 SS18L1 chr20 60718945 + ADRM1 chr20 60881253 + Exonic hg19 Non-Cancer ERR315395 4 0 In-Frame Intra-chr q13.33 q13.33 130872 ChimerSeq STARFusion 1000Genome CST7-HBA1 CST7 chr20 24940395 + HBA1 chr16 226929 + Exonic hg19 Non-Cancer ERR315395 3 1 Out-of-frame Inter-chr p11.21 p13.3 130873 ChimerSeq STARFusion 1000Genome H2AFJ-HBA1 H2AFJ chr12 14927820 + HBA1 chr16 227321 + Exonic hg19 Non-Cancer ERR315395 3 1 Out-of-frame Inter-chr p12.3 p13.3 130874 ChimerSeq STARFusion 1000Genome HNRNPA0-FTH1 HNRNPA0 chr5 137088956 - FTH1 chr11 61734917 - Exonic hg19 Non-Cancer ERR315395 3 1 Out-of-frame Inter-chr q31.2 q12.3 130875 ChimerSeq STARFusion 1000Genome ANP32A-B2M ANP32A chr15 69113037 - B2M chr15 45007621 + Exonic hg19 Non-Cancer ERR315395 2 2 Out-of-frame Intra-chr q23 Tumor suppressor gene Oncogene 130876 ChimerSeq STARFusion 1000Genome ACTR2-SMC4 ACTR2 chr2 65467096 + SMC4 chr3 160129708 + Exonic hg19 Non-Cancer ERR315395 2 0 In-Frame Inter-chr p14 TKL:STKR q25.33 130877 ChimerSeq STARFusion 1000Genome BMI1-HNRNPDL BMI1 chr10 22615490 + HNRNPDL chr4 83346036 - Exonic hg19 Non-Cancer ERR315395 2 0 Out-of-frame Inter-chr p12.2 q21.22 130878 ChimerSeq STARFusion 1000Genome C20orf112-ASXL1 C20orf112 chr20 31062404 - ASXL1 chr20 30954187 + Exonic hg19 Non-Cancer ERR315395 2 0 Out-of-frame Intra-chr q11.21 Oncogene Tumor suppressor gene 130879 ChimerSeq STARFusion 1000Genome CASP8AP2-NFX1 CASP8AP2 chr6 90539786 + NFX1 chr9 33366627 + Exonic hg19 Non-Cancer ERR315395 2 0 5'UTR-CDS Inter-chr q15 p13.3 Transcription factor 130880 ChimerSeq STARFusion 1000Genome CXCR4-FYTTD1 CXCR4 chr2 136875616 - FYTTD1 chr3 197483297 + Exonic hg19 Non-Cancer ERR315395 2 0 Out-of-frame Inter-chr q22.1 q29 130881 ChimerSeq STARFusion 1000Genome CYTH1-UBB CYTH1 chr17 76778284 - UBB chr17 16285216 + Exonic hg19 Non-Cancer ERR315395 2 0 Out-of-frame Intra-chr q25.3 p11.2 130882 ChimerSeq STARFusion 1000Genome DHX9-GLUL DHX9 chr1 182808591 + GLUL chr1 182357885 - Exonic hg19 Non-Cancer ERR315395 2 0 5'UTR-5'UTR Intra-chr q25.3 q25.3 130883 ChimerSeq STARFusion 1000Genome GLB1-CHD2 GLB1 chr3 33138211 - CHD2 chr15 93428745 + Exonic hg19 Non-Cancer ERR315395 2 0 Out-of-frame Inter-chr p22.3 q26.1 130884 ChimerSeq STARFusion 1000Genome N4BP2L1-HMGB1 N4BP2L1 chr13 33002041 - HMGB1 chr13 31037831 - Exonic hg19 Non-Cancer ERR315395 2 0 CDS-5'UTR Intra-chr q13.1 q12.3 130885 ChimerSeq STARFusion 1000Genome PWWP2B-ZNF511 PWWP2B chr10 134219793 + ZNF511 chr10 135126292 + Exonic hg19 Non-Cancer ERR315395 2 0 3'UTR-CDS Intra-chr q26.3 q26.3 Transcription factor 130886 ChimerSeq STARFusion 1000Genome RPS9-MYADM RPS9 chr19 54705149 + MYADM chr19 54376782 + Exonic hg19 Non-Cancer ERR315395 2 0 3'UTR-5'UTR Intra-chr q13.42 130887 ChimerSeq STARFusion 1000Genome THEMIS2-CDC42 THEMIS2 chr1 28199176 + CDC42 chr1 22404922 + Exonic hg19 Non-Cancer ERR315395 2 0 Out-of-frame Intra-chr p35.3 p36.12 130888 ChimerSeq STARFusion 1000Genome TMPPE-CHD2 TMPPE chr3 33138211 - CHD2 chr15 93428745 + Exonic hg19 Non-Cancer ERR315395 2 0 Out-of-frame Inter-chr p22.3 q26.1 130889 ChimerSeq STARFusion 1000Genome YPEL5-CHD2 YPEL5 chr2 30369928 + CHD2 chr15 93428745 + Exonic hg19 Non-Cancer ERR315395 2 0 5'UTR-5'UTR Inter-chr p23.1 q26.1 130890 ChimerSeq STARFusion 1000Genome YPEL5-HMGB1 YPEL5 chr2 30369928 + HMGB1 chr13 31037831 - Exonic hg19 Non-Cancer ERR315395 2 0 5'UTR-5'UTR Inter-chr p23.1 q12.3 130891 ChimerSeq STARFusion 1000Genome CLU-C3 CLU chr8 27455628 - C3 chr19 6720656 - Exonic hg19 Non-Cancer ERR315394 3 0 Out-of-frame Inter-chr p21.1 Tumor suppressor gene p13.3 130892 ChimerSeq STARFusion 1000Genome ATP5C1-ALDH7A1 ATP5C1 chr10 7838118 + ALDH7A1 chr5 125896816 - Exonic hg19 Non-Cancer ERR315399 2 0 In-Frame Inter-chr p14 q23.2 130893 ChimerSeq STARFusion 1000Genome EID2B-SUPT5H EID2B chr19 40023380 - SUPT5H chr19 39943996 + Exonic hg19 Non-Cancer ERR315399 2 0 Out-of-frame Intra-chr q13.2 q13.2 130894 ChimerSeq STARFusion 1000Genome LIFR-LATS2 LIFR chr5 38595363 - LATS2 chr13 21557945 - Exonic hg19 Non-Cancer ERR315399 2 0 5'UTR-CDS Inter-chr p13.1 Oncogene Tumor suppressor gene q12.11 AGC:NDR Tumor suppressor gene 130895 ChimerSeq STARFusion 1000Genome RBMS3-ATP2B4 RBMS3 chr3 29476406 + ATP2B4 chr1 203651870 + Exonic hg19 Non-Cancer ERR315399 2 0 CDS-5'UTR Inter-chr p24.1 Tumor suppressor gene q32.1 130896 ChimerSeq STARFusion 1000Genome WDR75-ATIC WDR75 chr2 190320170 + ATIC chr2 216200758 + Exonic hg19 Non-Cancer ERR315399 2 0 In-Frame Intra-chr q32.2 q35 130897 ChimerSeq STARFusion 1000Genome HSPB1-PPP1R13B HSPB1 chr7 75933507 + PPP1R13B chr14 104208451 - Exonic hg19 Non-Cancer ERR315398 5 0 Out-of-frame Inter-chr q11.23 q32.33 130898 ChimerSeq STARFusion 1000Genome SPAG7-PKP1 SPAG7 chr17 4862633 - PKP1 chr1 201299518 + Exonic hg19 Non-Cancer ERR315398 3 0 Out-of-frame Inter-chr p13.2 q32.1 130899 ChimerSeq STARFusion 1000Genome FBXW7-ARFIP1 FBXW7 chr4 153268082 - ARFIP1 chr4 153831216 + Exonic hg19 Non-Cancer ERR315398 2 0 Out-of-frame Intra-chr q31.3 Oncogene Tumor suppressor gene q31.3 130900 ChimerSeq STARFusion 1000Genome KAT2B-KANSL1 KAT2B chr3 20136900 + KANSL1 chr17 44145033 - Exonic hg19 Non-Cancer ERR315398 2 0 Out-of-frame Inter-chr p24.3 130901 ChimerSeq STARFusion 1000Genome MEF2A-CHST15 MEF2A chr15 100105874 + CHST15 chr10 125806240 - Exonic hg19 Non-Cancer ERR315398 2 0 5'UTR-5'UTR Inter-chr q26.3 Transcription factor q26.13 130902 ChimerSeq STARFusion 1000Genome PGAP2-STIM1 PGAP2 chr11 3829881 + STIM1 chr11 3988782 + Exonic hg19 Non-Cancer ERR315398 2 0 5'UTR-CDS Intra-chr p15.4 p15.4 130903 ChimerSeq STARFusion 1000Genome PPARG-MRPS6 PPARG chr3 12353952 + MRPS6 chr21 35475134 + Exonic hg19 Non-Cancer ERR315453 2 0 5'UTR-CDS Inter-chr p25.2 Oncogene Tumor suppressor gene Transcription factor q22.11 130904 ChimerSeq STARFusion 1000Genome PTBP2-TMEM56 PTBP2 chr1 97189150 + TMEM56 chr1 95657106 + Exonic hg19 Non-Cancer ERR315453 2 0 Out-of-frame Intra-chr p21.3 p21.3 130905 ChimerSeq STARFusion 1000Genome PGC-IGHA1 PGC chr6 41712421 - IGHA1 chr14 106174254 - Exonic hg19 Non-Cancer ERR315379 3 8 Out-of-frame Inter-chr p21.1 130906 ChimerSeq STARFusion 1000Genome PGC-IGHA1 PGC chr6 41711091 - IGHA1 chr14 106174442 - Exonic hg19 Non-Cancer ERR315379 3 5 Out-of-frame Inter-chr p21.1 130907 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315378 4 0 Out-of-frame Intra-chr p11.2 130908 ChimerSeq STARFusion 1000Genome NQO2-DDX17 NQO2 chr6 3017219 + DDX17 chr22 38894578 - Exonic hg19 Non-Cancer ERR315378 2 0 Out-of-frame Inter-chr p25.2 q13.1 130909 ChimerSeq STARFusion 1000Genome TXNDC11-TMF1 TXNDC11 chr16 11824501 - TMF1 chr3 69077446 - Exonic hg19 Non-Cancer ERR315378 2 0 Out-of-frame Inter-chr p13.13 p14.1 Transcription factor 130910 ChimerSeq STARFusion 1000Genome APOA1-HP APOA1 chr11 116706959 - HP chr16 72094565 + Exonic hg19 Non-Cancer ERR315463 3 2 Out-of-frame Inter-chr q23.3 q22.2 Tumor suppressor gene 130911 ChimerSeq STARFusion 1000Genome GALK2-SEC24B GALK2 chr15 49493447 + SEC24B chr4 110412483 + Exonic hg19 Non-Cancer ERR315462 2 0 In-Frame Inter-chr q21.1 q25 130912 ChimerSeq STARFusion 1000Genome ABL1-P4HB ABL1 chr9 133762682 + P4HB chr17 79801944 - Exonic hg19 Non-Cancer ERR315465 3 0 Out-of-frame Inter-chr q34.12 TK:Abl Oncogene q25.3 130913 ChimerSeq STARFusion 1000Genome GABPB1-B2M GABPB1 chr15 50647182 - B2M chr15 45007621 + Exonic hg19 Non-Cancer ERR315465 2 0 Out-of-frame Intra-chr q21.2 Oncogene 130914 ChimerSeq STARFusion 1000Genome GOLGA4-EIF2A GOLGA4 chr3 37370584 + EIF2A chr3 150299405 + Exonic hg19 Non-Cancer ERR315465 2 0 In-Frame Intra-chr p22.2 q25.1 130915 ChimerSeq STARFusion 1000Genome KLF8-IGBP1 KLF8 chrX 56276737 + IGBP1 chrX 69368611 + Exonic hg19 Non-Cancer ERR315465 2 0 In-Frame Intra-chr p11.21 Transcription factor q13.1 130916 ChimerSeq STARFusion 1000Genome PABPC1-RPS23 PABPC1 chr8 101730411 - RPS23 chr5 81573671 - Exonic hg19 Non-Cancer ERR315465 2 0 CDS-5'UTR Inter-chr q22.3 q14.2 130917 ChimerSeq STARFusion 1000Genome IGH@-MUC6 IGH@ chr14 106174456 - MUC6 chr11 1017980 - Exonic hg19 Non-Cancer ERR315467 4 10 Out-of-frame Inter-chr 32.33 130918 ChimerSeq STARFusion 1000Genome IGHA1-MUC6 IGHA1 chr14 106174456 - MUC6 chr11 1017980 - Exonic hg19 Non-Cancer ERR315467 4 9 Out-of-frame Inter-chr 130919 ChimerSeq STARFusion 1000Genome CEL-PLA2G1B CEL chr9 135959926 + PLA2G1B chr12 120762778 - Exonic hg19 Non-Cancer ERR315466 3 43 Out-of-frame Inter-chr q34.13 q24.31 130920 ChimerSeq STARFusion 1000Genome PTF1A-CTRB1 PTF1A chr10 23481455 + CTRB1 chr16 75257037 + Exonic hg19 Non-Cancer ERR315466 6 1 Out-of-frame Inter-chr p12.2 Transcription factor q23.1 130921 ChimerSeq STARFusion 1000Genome AGAP3-CUX1 AGAP3 chr7 150784159 + CUX1 chr7 101916637 + Exonic hg19 Non-Cancer ERR315466 2 0 In-Frame Intra-chr q36.1 q22.1 Tumor suppressor gene Transcription factor 130922 ChimerSeq STARFusion 1000Genome CTRB1-KLK13 CTRB1 chr16 75258086 + KLK13 chr19 51560032 - Exonic hg19 Non-Cancer ERR315466 2 0 In-Frame Inter-chr q23.1 q13.41 130923 ChimerSeq STARFusion 1000Genome PNLIP-SHARPIN PNLIP chr10 118310744 + SHARPIN chr8 145158128 - Exonic hg19 Non-Cancer ERR315466 2 0 In-Frame Inter-chr q25.3 q24.3 130924 ChimerSeq STARFusion 1000Genome PRKAG2-RBM33 PRKAG2 chr7 151573592 - RBM33 chr7 155499554 + Exonic hg19 Non-Cancer ERR315466 2 0 Out-of-frame Intra-chr q36.1 q36.3 130925 ChimerSeq STARFusion 1000Genome PROSER2-DNAJC1 PROSER2 chr10 11865469 + DNAJC1 chr10 22193541 - Exonic hg19 Non-Cancer ERR315466 2 0 Out-of-frame Intra-chr p14 p12.31 130926 ChimerSeq STARFusion 1000Genome ABI1-GDI2 ABI1 chr10 27112067 - GDI2 chr10 5842668 - Exonic hg19 Non-Cancer ERR315371 2 0 In-Frame Intra-chr p12.1 p15.1 130927 ChimerSeq STARFusion 1000Genome DRAM2-ELMOD3 DRAM2 chr1 111682123 - ELMOD3 chr2 85589309 + Exonic hg19 Non-Cancer ERR315371 2 0 Out-of-frame Inter-chr p13.3 p11.2 130928 ChimerSeq STARFusion 1000Genome ENTPD1-ZNF521 ENTPD1 chr10 97624618 + ZNF521 chr18 22902151 - Exonic hg19 Non-Cancer ERR315371 2 0 Out-of-frame Inter-chr q24.1 q11.2 Oncogene Transcription factor 130929 ChimerSeq STARFusion 1000Genome P2RY14-ZNF148 P2RY14 chr3 150996075 - ZNF148 chr3 125032500 - Exonic hg19 Non-Cancer ERR315371 2 0 5'UTR-5'UTR Intra-chr q25.1 q21.2 Transcription factor 130930 ChimerSeq STARFusion 1000Genome PAN3-ZFPM2 PAN3 chr13 28752072 + ZFPM2 chr8 106431372 + Exonic hg19 Non-Cancer ERR315371 2 0 Out-of-frame Inter-chr q12.2 q22.3 Transcription factor 130931 ChimerSeq STARFusion 1000Genome TRAPPC12-R3HDM1 TRAPPC12 chr2 3405664 + R3HDM1 chr2 136389288 + Exonic hg19 Non-Cancer ERR315371 2 0 Out-of-frame Intra-chr q21.3 130932 ChimerSeq STARFusion 1000Genome DHRSX-IGHG3 DHRSX chrX 2184830 - IGHG3 chr14 106237745 - Exonic hg19 Non-Cancer ERR315370 5 0 Out-of-frame Inter-chr p22.33 130933 ChimerSeq STARFusion 1000Genome DHRSX-IGHG3 DHRSX chrY 2134830 - IGHG3 chr14 106237745 - Exonic hg19 Non-Cancer ERR315370 5 0 Out-of-frame Inter-chr p22.33 130934 ChimerSeq STARFusion 1000Genome SMAD4-IGH@ SMAD4 chr18 48556640 + IGH@ chr14 106111130 - Exonic hg19 Non-Cancer ERR315370 3 1 Out-of-frame Inter-chr q21.2 Oncogene Tumor suppressor gene Transcription factor 32.33 130935 ChimerSeq STARFusion 1000Genome AFF1-PABPC1L AFF1 chr4 87869723 + PABPC1L chr20 43559159 + Exonic hg19 Non-Cancer ERR315373 2 0 Out-of-frame Inter-chr q21.3 Oncogene q13.12 130936 ChimerSeq STARFusion 1000Genome CCND3-TRERF1 CCND3 chr6 42016239 - TRERF1 chr6 42268487 - Exonic hg19 Non-Cancer ERR315373 2 0 5'UTR-5'UTR Intra-chr p21.1 p21.1 Transcription factor 130937 ChimerSeq STARFusion 1000Genome SRSF1-NOL7 SRSF1 chr17 56083162 - NOL7 chr6 13616695 + Exonic hg19 Non-Cancer ERR315373 2 0 Out-of-frame Inter-chr q22 p23 Tumor suppressor gene 130938 ChimerSeq STARFusion 1000Genome TAF11-TSHZ2 TAF11 chr6 34848066 - TSHZ2 chr20 51870038 + Exonic hg19 Non-Cancer ERR315373 2 0 Out-of-frame Inter-chr p21.31 q13.2 Transcription factor 130939 ChimerSeq STARFusion 1000Genome VMP1-PYROXD1 VMP1 chr17 57851246 + PYROXD1 chr12 21608066 + Exonic hg19 Non-Cancer ERR315373 2 0 Out-of-frame Inter-chr q23.1 p12.1 130940 ChimerSeq STARFusion 1000Genome DTX2P1-CCDC146 DTX2P1 chr7 76645172 + CCDC146 chr7 76866264 + Exonic hg19 Non-Cancer ERR315372 2 4 Out-of-frame Intra-chr q11.23 q11.23 130941 ChimerSeq STARFusion 1000Genome EMC3-FANCD2 EMC3 chr3 10028191 - FANCD2 chr3 10107078 + Exonic hg19 Non-Cancer ERR315372 2 0 Out-of-frame Intra-chr p25.3 p25.3 Oncogene 130942 ChimerSeq STARFusion 1000Genome PPP1R13B-ZNF789 PPP1R13B chr14 104223987 - ZNF789 chr7 99101170 + Exonic hg19 Non-Cancer ERR315372 2 0 Out-of-frame Inter-chr q32.33 q22.1 Transcription factor 130943 ChimerSeq STARFusion 1000Genome CSH1-IGF2 CSH1 chr17 61972511 - IGF2 chr11 2152918 - Exonic hg19 Non-Cancer ERR315375 3 17 Out-of-frame Inter-chr q23.3 p15.5 Oncogene 130944 ChimerSeq STARFusion 1000Genome DNAJC25-UGCG DNAJC25 chr9 114429226 + UGCG chr9 114676885 + Exonic hg19 Non-Cancer ERR315374 3 1 Out-of-frame Intra-chr q31.3 q31.3 130945 ChimerSeq STARFusion 1000Genome DNAJB6-PICALM DNAJB6 chr7 157160177 + PICALM chr11 85742653 - Exonic hg19 Non-Cancer ERR315374 2 0 In-Frame Inter-chr q36.3 q14.2 130946 ChimerSeq STARFusion 1000Genome GLI3-GRB10 GLI3 chr7 42063067 - GRB10 chr7 50823753 - Exonic hg19 Non-Cancer ERR315374 2 0 CDS-5'UTR Intra-chr p14.1 Transcription factor p12.1 130947 ChimerSeq STARFusion 1000Genome GPC3-C2CD5 GPC3 chrX 133087077 - C2CD5 chr12 22666313 - Exonic hg19 Non-Cancer ERR315374 2 0 Out-of-frame Inter-chr q26.2 Tumor suppressor gene p12.1 130948 ChimerSeq STARFusion 1000Genome MR1-STX6 MR1 chr1 181003210 + STX6 chr1 180974599 - Exonic hg19 Non-Cancer ERR315374 2 0 Out-of-frame Intra-chr q25.3 q25.3 130949 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315374 2 0 Out-of-frame Intra-chr p11.2 130950 ChimerSeq STARFusion 1000Genome POLA1-PGK1 POLA1 chrX 24717666 + PGK1 chrX 77378692 + Exonic hg19 Non-Cancer ERR315374 2 0 In-Frame Intra-chr p22.11 q21.1 130951 ChimerSeq STARFusion 1000Genome SLC7A5-UBB SLC7A5 chr16 87902491 - UBB chr17 16285216 + Exonic hg19 Non-Cancer ERR315374 2 0 Out-of-frame Inter-chr q24.2 p11.2 130952 ChimerSeq STARFusion 1000Genome SYNE2-FANCD2 SYNE2 chr14 64445732 + FANCD2 chr3 10136884 + Exonic hg19 Non-Cancer ERR315374 2 0 In-Frame Inter-chr q23.2 p25.3 Oncogene 130953 ChimerSeq STARFusion 1000Genome DNAJC25-UGCG DNAJC25 chr9 114429226 + UGCG chr9 114676885 + Exonic hg19 Non-Cancer ERR315377 2 1 Out-of-frame Intra-chr q31.3 q31.3 130954 ChimerSeq STARFusion 1000Genome TMEM247-RHOQ TMEM247 chr2 46656418 + RHOQ chr2 46803226 + Exonic hg19 Non-Cancer ERR315377 2 1 Out-of-frame Intra-chr p21 p21 130955 ChimerSeq STARFusion 1000Genome PDE3B-EPS8 PDE3B chr11 14666599 + EPS8 chr12 15784598 - Exonic hg19 Non-Cancer ERR315377 2 0 In-Frame Inter-chr p15.2 p12.3 130956 ChimerSeq STARFusion 1000Genome SRSF5-CLTC SRSF5 chr14 70235613 + CLTC chr17 57724759 + Exonic hg19 Non-Cancer ERR315377 2 0 Out-of-frame Inter-chr q24.1 q23.1 130957 ChimerSeq STARFusion 1000Genome ACPP-RNF13 ACPP chr3 132036420 + RNF13 chr3 149613260 + Exonic hg19 Non-Cancer ERR315376 2 0 In-Frame Intra-chr q22.1 q25.1 130958 ChimerSeq STARFusion 1000Genome LENG8-EVPL LENG8 chr19 54969700 + EVPL chr17 74015734 - Exonic hg19 Non-Cancer ERR315376 2 0 Out-of-frame Inter-chr q25.1 130959 ChimerSeq STARFusion 1000Genome ZNF217-CDH22 ZNF217 chr20 52214170 - CDH22 chr20 44869896 - Exonic hg19 Non-Cancer ERR315376 2 0 5'UTR-CDS Intra-chr q13.2 Oncogene Transcription factor q13.12 130960 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315384 3 0 Out-of-frame Intra-chr p11.2 130961 ChimerSeq STARFusion 1000Genome ARPC1A-ICA1 ARPC1A chr7 98983401 + ICA1 chr7 8153674 - Exonic hg19 Non-Cancer ERR315384 2 0 3'UTR-CDS Intra-chr q22.1 p21.3 130962 ChimerSeq STARFusion 1000Genome ARPC1B-ICA1 ARPC1B chr7 98983401 + ICA1 chr7 8153674 - Exonic hg19 Non-Cancer ERR315384 2 0 In-Frame Intra-chr q22.1 p21.3 130963 ChimerSeq STARFusion 1000Genome CASQ2-LRIF1 CASQ2 chr1 116310929 - LRIF1 chr1 111492745 - Exonic hg19 Non-Cancer ERR315384 2 0 In-Frame Intra-chr p13.1 p13.3 130964 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315385 5 0 Out-of-frame Intra-chr p11.2 130965 ChimerSeq STARFusion 1000Genome UBA1-RAB3GAP2 UBA1 chrX 47071866 + RAB3GAP2 chr1 220326669 - Exonic hg19 Non-Cancer ERR315385 3 0 Out-of-frame Inter-chr p11.3 q41 130966 ChimerSeq STARFusion 1000Genome DNAJC25-UGCG DNAJC25 chr9 114429226 + UGCG chr9 114676885 + Exonic hg19 Non-Cancer ERR315385 2 1 Out-of-frame Intra-chr q31.3 q31.3 130967 ChimerSeq STARFusion 1000Genome ECI1-PSMA4 ECI1 chr16 2293047 - PSMA4 chr15 78837211 + Exonic hg19 Non-Cancer ERR315385 2 0 Out-of-frame Inter-chr p13.3 q25.1 130968 ChimerSeq STARFusion 1000Genome ATP6V0A1-RPL27 ATP6V0A1 chr17 40613029 + RPL27 chr17 41154690 + Exonic hg19 Non-Cancer ERR315386 2 0 Out-of-frame Intra-chr q21.2 q21.31 130969 ChimerSeq STARFusion 1000Genome DOCK9-RBM6 DOCK9 chr13 99532152 - RBM6 chr3 50085678 + Exonic hg19 Non-Cancer ERR315386 2 0 Out-of-frame Inter-chr q32.3 p21.31 Tumor suppressor gene 130970 ChimerSeq STARFusion 1000Genome GLG1-ME2 GLG1 chr16 74501654 - ME2 chr18 48450468 + Exonic hg19 Non-Cancer ERR315386 2 0 Out-of-frame Inter-chr q23.1 q21.2 130971 ChimerSeq STARFusion 1000Genome KIAA1958-SNX30 KIAA1958 chr9 115337531 + SNX30 chr9 115567056 + Exonic hg19 Non-Cancer ERR315386 2 0 Out-of-frame Intra-chr q32 q32 130972 ChimerSeq STARFusion 1000Genome IGL@-GRM6 IGL@ chr22 22764599 + GRM6 chr5 178408820 - Exonic hg19 Non-Cancer ERR315387 5 0 Out-of-frame Inter-chr q11.22 q35.3 130973 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315380 14 0 Out-of-frame Intra-chr p11.2 130974 ChimerSeq STARFusion 1000Genome CLASP1-ANAPC1 CLASP1 chr2 122363277 - ANAPC1 chr2 112608487 - Exonic hg19 Non-Cancer ERR315380 2 0 In-Frame Intra-chr q14.3 q13 Tumor suppressor gene 130975 ChimerSeq STARFusion 1000Genome HPS1-TYSND1 HPS1 chr10 100202881 - TYSND1 chr10 71903728 - Exonic hg19 Non-Cancer ERR315380 2 0 Out-of-frame Intra-chr q24.2 q22.1 130976 ChimerSeq STARFusion 1000Genome DEFA5-GDI2P2 DEFA5 chr8 6914107 - GDI2P2 chr1 72740320 + Exonic hg19 Non-Cancer ERR315381 3 0 Out-of-frame Inter-chr p23.1 p31.1 130977 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315381 3 0 Out-of-frame Intra-chr p11.2 130978 ChimerSeq STARFusion 1000Genome CALM2-IK CALM2 chr2 47403580 - IK chr5 140028056 + Exonic hg19 Non-Cancer ERR315381 2 0 Out-of-frame Inter-chr p21 q31.3 130979 ChimerSeq STARFusion 1000Genome RNF111-ANXA2 RNF111 chr15 59280267 + ANXA2 chr15 60656722 - Exonic hg19 Non-Cancer ERR315381 2 0 5'UTR-CDS Intra-chr q22.1 Tumor suppressor gene q22.2 130980 ChimerSeq STARFusion 1000Genome SEZ6L2-RCC1 SEZ6L2 chr16 29896907 - RCC1 chr1 28834640 + Exonic hg19 Non-Cancer ERR315381 2 0 Out-of-frame Inter-chr p11.2 p35.3 130981 ChimerSeq STARFusion 1000Genome SEZ6L2-SNHG3 SEZ6L2 chr16 29896907 - SNHG3 chr1 28834640 + Exonic hg19 Non-Cancer ERR315381 2 0 Out-of-frame Inter-chr p11.2 p35.3 130982 ChimerSeq STARFusion 1000Genome STAG1-PRKCH STAG1 chr3 136471037 - PRKCH chr14 61909829 + Exonic hg19 Non-Cancer ERR315381 2 0 Out-of-frame Inter-chr q22.3 q23.1 130983 ChimerSeq STARFusion 1000Genome XPO4-PSPC1 XPO4 chr13 21476809 - PSPC1 chr13 20304484 - Exonic hg19 Non-Cancer ERR315381 2 0 Out-of-frame Intra-chr q12.11 q12.11 130984 ChimerSeq STARFusion 1000Genome IGH@-SMR3B IGH@ chr14 106173695 - SMR3B chr4 71255730 + Exonic hg19 Non-Cancer ERR315382 7 133 Out-of-frame Inter-chr 32.33 q13.3 130985 ChimerSeq STARFusion 1000Genome IGHA1-SMR3B IGHA1 chr14 106173695 - SMR3B chr4 71255730 + Exonic hg19 Non-Cancer ERR315382 7 112 Out-of-frame Inter-chr q13.3 130986 ChimerSeq STARFusion 1000Genome IGHA1-SMR3B IGHA1 chr14 106174437 - SMR3B chr4 71255678 + Exonic hg19 Non-Cancer ERR315382 3 112 Out-of-frame Inter-chr q13.3 130987 ChimerSeq STARFusion 1000Genome IGH@-SMR3B IGH@ chr14 106053464 - SMR3B chr4 71255730 + Exonic hg19 Non-Cancer ERR315382 4 88 Out-of-frame Inter-chr 32.33 q13.3 130988 ChimerSeq STARFusion 1000Genome IGH@-SMR3B IGH@ chr14 106174437 - SMR3B chr4 71255678 + Exonic hg19 Non-Cancer ERR315382 3 88 Out-of-frame Inter-chr 32.33 q13.3 130989 ChimerSeq STARFusion 1000Genome HTN3-STATH HTN3 chr4 70898970 + STATH chr4 70867906 + Exonic hg19 Non-Cancer ERR315382 2 17 3'UTR-3'UTR Intra-chr 130990 ChimerSeq STARFusion 1000Genome GMPR2-MVP GMPR2 chr14 24708257 + MVP chr16 29855934 + Exonic hg19 Non-Cancer ERR315382 3 0 Out-of-frame Inter-chr q12 p11.2 130991 ChimerSeq STARFusion 1000Genome MTND2P28-MTATP8P1 MTND2P28 chr1 565861 + MTATP8P1 chr1 568950 + Exonic hg19 Non-Cancer ERR315383 17 0 Out-of-frame Intra-chr p36.33 p36.33 130992 ChimerSeq STARFusion 1000Genome NRD1-OSBPL9 NRD1 chr1 52299689 - OSBPL9 chr1 52179675 + Exonic hg19 Non-Cancer ERR315388 2 0 Out-of-frame Intra-chr p32.3 130993 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315388 2 0 Out-of-frame Intra-chr p11.2 130994 ChimerSeq STARFusion 1000Genome RNF111-ANXA2 RNF111 chr15 59280267 + ANXA2 chr15 60656722 - Exonic hg19 Non-Cancer ERR315388 2 0 5'UTR-CDS Intra-chr q22.1 Tumor suppressor gene q22.2 130995 ChimerSeq STARFusion 1000Genome ST8SIA4-FAM174A ST8SIA4 chr5 100191807 - FAM174A chr5 99921885 + Exonic hg19 Non-Cancer ERR315388 2 0 Out-of-frame Intra-chr q21.1 q21.1 130996 ChimerSeq STARFusion 1000Genome FASTKD2-CPO FASTKD2 chr2 207655410 + CPO chr2 207814341 + Exonic hg19 Non-Cancer ERR315389 2 0 Out-of-frame Intra-chr q33.3 q33.3 130997 ChimerSeq STARFusion 1000Genome USMG5-C9orf3 USMG5 chr10 105156166 - C9orf3 chr9 97848964 + Exonic hg19 Non-Cancer ERR315389 2 0 Out-of-frame Inter-chr q24.33 q22.32 130998 ChimerSeq STARFusion 1000Genome KRT13-MYH11 KRT13 chr17 39657554 - MYH11 chr16 15797446 - Exonic hg19 Non-Cancer ERR315472 3 10 Out-of-frame Inter-chr q21.2 Oncogene 130999 ChimerSeq STARFusion 1000Genome HSPB1-PPP1R13B HSPB1 chr7 75933507 + PPP1R13B chr14 104208451 - Exonic hg19 Non-Cancer ERR315472 4 0 Out-of-frame Inter-chr q11.23 q32.33 131000 ChimerSeq STARFusion 1000Genome RTN4-THSD7A RTN4 chr2 55199949 - THSD7A chr7 11411389 - Exonic hg19 Non-Cancer ERR315472 4 0 Out-of-frame Inter-chr p16.1 Tumor suppressor gene p21.3 131001 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315472 3 0 Out-of-frame Intra-chr p11.2 131002 ChimerSeq STARFusion 1000Genome PPP4R1-ITGB6 PPP4R1 chr18 9614224 - ITGB6 chr2 160968710 - Exonic hg19 Non-Cancer ERR315472 3 0 In-Frame Inter-chr p11.22 q24.2 131003 ChimerSeq STARFusion 1000Genome CRHR1-AMY2B CRHR1 chr17 43707524 + AMY2B chr1 104108057 + Exonic hg19 Non-Cancer ERR315472 2 0 5'UTR-5'UTR Inter-chr q21.31 p21.1 131004 ChimerSeq STARFusion 1000Genome PRPF19-SAP30BP PRPF19 chr11 60665318 - SAP30BP chr17 73698560 + Exonic hg19 Non-Cancer ERR315472 2 0 Out-of-frame Inter-chr q12.2 q25.1 131005 ChimerSeq STARFusion 1000Genome TPH2-TRHDE TPH2 chr12 72499532 + TRHDE chr12 72680461 + Exonic hg19 Non-Cancer ERR315473 3 3 Out-of-frame Intra-chr q21.1 q21.1 131006 ChimerSeq STARFusion 1000Genome IGJ-PSMD5 IGJ chr4 71521677 - PSMD5 chr9 123586599 - Exonic hg19 Non-Cancer ERR315473 3 0 Out-of-frame Inter-chr q33.2 131007 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315473 3 0 Out-of-frame Intra-chr p11.2 131008 ChimerSeq STARFusion 1000Genome RN7SL704P-YWHAB RN7SL704P chr22 38628008 + YWHAB chr20 43536093 + Exonic hg19 Non-Cancer ERR315473 3 0 Out-of-frame Inter-chr q13.1 q13.12 131009 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315368 3 0 Out-of-frame Intra-chr p11.2 131010 ChimerSeq STARFusion 1000Genome COL6A2-POLDIP3 COL6A2 chr21 47546455 + POLDIP3 chr22 42983578 - Exonic hg19 Non-Cancer ERR315368 2 0 In-Frame Inter-chr q22.3 q13.2 131011 ChimerSeq STARFusion 1000Genome PLSCR4-RNF13 PLSCR4 chr3 145968747 - RNF13 chr3 149613260 + Exonic hg19 Non-Cancer ERR315368 2 0 Out-of-frame Intra-chr q24 q25.1 131012 ChimerSeq STARFusion 1000Genome IGHA1-PGC IGHA1 chr14 106174696 - PGC chr6 41705500 - Exonic hg19 Non-Cancer ERR315369 4 4 Out-of-frame Inter-chr p21.1 131013 ChimerSeq STARFusion 1000Genome TMEM247-RHOQ TMEM247 chr2 46656418 + RHOQ chr2 46803226 + Exonic hg19 Non-Cancer ERR315476 2 1 Out-of-frame Intra-chr p21 p21 131014 ChimerSeq STARFusion 1000Genome CXorf36-CHMP3 CXorf36 chrX 45050996 - CHMP3 chr2 86769435 - Exonic hg19 Non-Cancer ERR315476 2 0 In-Frame Inter-chr p11.3 p11.2 131015 ChimerSeq STARFusion 1000Genome DNAJC25-UGCG DNAJC25 chr9 114429226 + UGCG chr9 114676885 + Exonic hg19 Non-Cancer ERR315476 2 0 Out-of-frame Intra-chr q31.3 q31.3 131016 ChimerSeq STARFusion 1000Genome MICALL1-RBM39 MICALL1 chr22 38333799 + RBM39 chr20 34301018 - Exonic hg19 Non-Cancer ERR315476 2 0 In-Frame Inter-chr q13.1 q11.22 131017 ChimerSeq STARFusion 1000Genome MYH11-PNN MYH11 chr16 15831343 - PNN chr14 39644521 + Exonic hg19 Non-Cancer ERR315474 3 0 Out-of-frame Inter-chr Oncogene q21.1 Tumor suppressor gene 131018 ChimerSeq STARFusion 1000Genome ZMYM2-AIG1 ZMYM2 chr13 20660520 + AIG1 chr6 143661113 + Exonic hg19 Non-Cancer ERR315474 3 0 Out-of-frame Inter-chr q12.11 q24.2 131019 ChimerSeq STARFusion 1000Genome CTAGE5-PSMD1 CTAGE5 chr14 39777791 + PSMD1 chr2 231940225 + Exonic hg19 Non-Cancer ERR315474 2 0 In-Frame Inter-chr q21.1 q37.1 131020 ChimerSeq STARFusion 1000Genome CWF19L2-TMEM41A CWF19L2 chr11 107263505 - TMEM41A chr3 185206804 - Exonic hg19 Non-Cancer ERR315474 2 0 Out-of-frame Inter-chr q22.3 q27.2 131021 ChimerSeq STARFusion 1000Genome ERBB2IP-TNNI3K ERBB2IP chr5 65222634 + TNNI3K chr1 74701786 + Exonic hg19 Non-Cancer ERR315474 2 0 5'UTR-CDS Inter-chr p31.1 131022 ChimerSeq STARFusion 1000Genome GRAP2-PAFAH1B1 GRAP2 chr22 40297334 + PAFAH1B1 chr17 2541393 + Exonic hg19 Non-Cancer ERR315474 2 0 5'UTR-5'UTR Inter-chr q13.1 p13.3 Tumor suppressor gene 131023 ChimerSeq STARFusion 1000Genome KDM6A-MAGED1 KDM6A chrX 44733233 + MAGED1 chrX 51637365 + Exonic hg19 Non-Cancer ERR315474 2 0 CDS-5'UTR Intra-chr p11.3 Oncogene Tumor suppressor gene p11.22 131024 ChimerSeq STARFusion 1000Genome SEL1L3-CBR4 SEL1L3 chr4 25766948 - CBR4 chr4 169911479 - Exonic hg19 Non-Cancer ERR315474 2 0 Out-of-frame Intra-chr p15.2 q32.3 131025 ChimerSeq STARFusion 1000Genome STK11-EGLN2 STK11 chr19 1207202 + EGLN2 chr19 41306244 + Exonic hg19 Non-Cancer ERR315474 2 0 CDS-5'UTR Intra-chr p13.3 Oncogene Tumor suppressor gene q13.2 131026 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315475 4 0 Out-of-frame Intra-chr p11.2 131027 ChimerSeq STARFusion 1000Genome KRT13-MYH11 KRT13 chr17 39657554 - MYH11 chr16 15797446 - Exonic hg19 Non-Cancer ERR315362 4 23 Out-of-frame Inter-chr q21.2 Oncogene 131028 ChimerSeq STARFusion 1000Genome CSTB-DPH1 CSTB chr21 45194049 - DPH1 chr17 1946246 + Exonic hg19 Non-Cancer ERR315362 9 1 Out-of-frame Inter-chr q22.3 p13.3 Tumor suppressor gene 131029 ChimerSeq STARFusion 1000Genome CSTB-OVCA2 CSTB chr21 45194049 - OVCA2 chr17 1946246 + Exonic hg19 Non-Cancer ERR315362 9 1 Out-of-frame Inter-chr q22.3 p13.3 131030 ChimerSeq STARFusion 1000Genome DDX3X-KRT13 DDX3X chrX 41206905 + KRT13 chr17 39661579 - Exonic hg19 Non-Cancer ERR315362 3 1 Out-of-frame Inter-chr p11.4 Tumor suppressor gene q21.2 131031 ChimerSeq STARFusion 1000Genome SFN-YWHAZP3 SFN chr1 27190375 + YWHAZP3 chr10 23426518 + Exonic hg19 Non-Cancer ERR315362 3 1 Out-of-frame Inter-chr p36.11 Tumor suppressor gene p12.2 131032 ChimerSeq STARFusion 1000Genome HSPB1-PPP1R13B HSPB1 chr7 75933507 + PPP1R13B chr14 104208451 - Exonic hg19 Non-Cancer ERR315362 3 0 Out-of-frame Inter-chr q11.23 q32.33 131033 ChimerSeq STARFusion 1000Genome KRT13-INO80D KRT13 chr17 39658687 - INO80D chr2 206927629 - Exonic hg19 Non-Cancer ERR315362 3 0 Out-of-frame Inter-chr q21.2 131034 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315362 3 0 Out-of-frame Intra-chr p11.2 131035 ChimerSeq STARFusion 1000Genome RIPK4-TMPRSS2 RIPK4 chr21 43187020 - TMPRSS2 chr21 42852529 - Exonic hg19 Non-Cancer ERR315362 2 0 Out-of-frame Intra-chr q22.3 q22.3 131036 ChimerSeq STARFusion 1000Genome PCM1-XPO4 PCM1 chr8 17823982 + XPO4 chr13 21374464 - Exonic hg19 Non-Cancer ERR315363 2 0 Out-of-frame Inter-chr p22 q12.11 131037 ChimerSeq STARFusion 1000Genome KIAA1841-HMGB1 KIAA1841 chr2 61345251 + HMGB1 chr13 31037831 - Exonic hg19 Non-Cancer ERR315360 2 0 CDS-5'UTR Inter-chr p15 q12.3 131038 ChimerSeq STARFusion 1000Genome NUP210-STOM NUP210 chr3 13461560 - STOM chr9 124103686 - Exonic hg19 Non-Cancer ERR315360 2 0 Out-of-frame Inter-chr p25.1 q33.2 131039 ChimerSeq STARFusion 1000Genome ARHGEF3-CNOT4 ARHGEF3 chr3 56916320 - CNOT4 chr7 135048818 - Exonic hg19 Non-Cancer ERR315366 2 0 Out-of-frame Inter-chr p14.3 q33 131040 ChimerSeq STARFusion 1000Genome FBXW2-UBAP2L FBXW2 chr9 123550047 - UBAP2L chr1 154238977 + Exonic hg19 Non-Cancer ERR315366 2 0 Out-of-frame Inter-chr q33.2 q21.3 131041 ChimerSeq STARFusion 1000Genome RPS6KC1-LPGAT1 RPS6KC1 chr1 213251158 + LPGAT1 chr1 211966532 - Exonic hg19 Non-Cancer ERR315366 2 0 In-Frame Intra-chr q32.3 q32.3 131042 ChimerSeq STARFusion 1000Genome TIMM44-UBE2G1 TIMM44 chr19 8002912 - UBE2G1 chr17 4186216 - Exonic hg19 Non-Cancer ERR315366 2 0 In-Frame Inter-chr p13.2 p13.2 131043 ChimerSeq STARFusion 1000Genome ACSS1-FANCM ACSS1 chr20 25000646 - FANCM chr14 45628299 + Exonic hg19 Non-Cancer ERR315367 3 0 Out-of-frame Inter-chr p11.21 q21.2 131044 ChimerSeq STARFusion 1000Genome PDE7A-AKAP7 PDE7A chr8 66657642 - AKAP7 chr6 131540801 + Exonic hg19 Non-Cancer ERR315367 2 0 Out-of-frame Inter-chr q13.1 q23.2 131045 ChimerSeq STARFusion 1000Genome PPP2R3A-TMEM165 PPP2R3A chr3 135768203 + TMEM165 chr4 56277781 + Exonic hg19 Non-Cancer ERR315367 2 0 In-Frame Inter-chr q22.2 q12 131046 ChimerSeq STARFusion 1000Genome STAU2-LRRC39 STAU2 chr8 74585342 - LRRC39 chr1 100614653 - Exonic hg19 Non-Cancer ERR315367 2 0 Out-of-frame Inter-chr q21.11 p21.2 131047 ChimerSeq STARFusion 1000Genome RN7SL704P-YWHAB RN7SL704P chr22 38628008 + YWHAB chr20 43536093 + Exonic hg19 Non-Cancer ERR315447 3 0 Out-of-frame Inter-chr q13.1 q13.12 131048 ChimerSeq STARFusion 1000Genome RTN4-THSD7A RTN4 chr2 55199949 - THSD7A chr7 11411389 - Exonic hg19 Non-Cancer ERR315447 3 0 Out-of-frame Inter-chr p16.1 Tumor suppressor gene p21.3 131049 ChimerSeq STARFusion 1000Genome ARFGEF1-HNRNPH3 ARFGEF1 chr8 68255399 - HNRNPH3 chr10 70096956 + Exonic hg19 Non-Cancer ERR315447 2 0 Out-of-frame Inter-chr q13.2 q21.3 131050 ChimerSeq STARFusion 1000Genome KIAA0753-ZNF714 KIAA0753 chr17 6498292 - ZNF714 chr19 21299613 + Exonic hg19 Non-Cancer ERR315447 2 0 Out-of-frame Inter-chr p13.1 p12 Transcription factor 131051 ChimerSeq STARFusion 1000Genome PDE4DIP-UBE2K PDE4DIP chr1 144946625 - UBE2K chr4 39776454 + Exonic hg19 Non-Cancer ERR315447 2 0 Out-of-frame Inter-chr q21.2 Oncogene p14 131052 ChimerSeq STARFusion 1000Genome NPNT-PPA2 NPNT chr4 106848585 + PPA2 chr4 106377902 - Exonic hg19 Non-Cancer ERR315445 2 0 In-Frame Intra-chr q24 q24 131053 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315445 2 0 Out-of-frame Intra-chr p11.2 131054 ChimerSeq STARFusion 1000Genome NUMB-FBXO7 NUMB chr14 73925199 - FBXO7 chr22 32875120 + Exonic hg19 Non-Cancer ERR315444 2 0 Out-of-frame Inter-chr q24.3 Tumor suppressor gene q12.3 131055 ChimerSeq STARFusion 1000Genome SETDB1-PIP5K1A SETDB1 chr1 150900450 + PIP5K1A chr1 151219396 + Exonic hg19 Non-Cancer ERR315444 2 0 In-Frame Intra-chr q21.3 Transcription factor q21.3 131056 ChimerSeq STARFusion 1000Genome TSPAN18-MYO10 TSPAN18 chr11 44786062 + MYO10 chr5 16690028 - Exonic hg19 Non-Cancer ERR315444 2 0 5'UTR-CDS Inter-chr p11.2 p15.1 131057 ChimerSeq STARFusion 1000Genome USP15-PPM1H USP15 chr12 62696701 + PPM1H chr12 63114069 - Exonic hg19 Non-Cancer ERR315444 2 0 In-Frame Intra-chr q14.1 q14.2 131058 ChimerSeq STARFusion 1000Genome COMMD10-AP3S1 COMMD10 chr5 115428397 + AP3S1 chr5 115230784 + Exonic hg19 Non-Cancer ERR315443 4 5 In-Frame Intra-chr q23.1 q22.3 KB Pub Seq+ 131059 ChimerSeq STARFusion 1000Genome GATSL2-GTF2I GATSL2 chr7 74867229 - GTF2I chr7 74143124 + Exonic hg19 Non-Cancer ERR315443 3 2 Out-of-frame Intra-chr q11.23 Transcription factor 131060 ChimerSeq STARFusion 1000Genome RPS21-PRKAR1B RPS21 chr20 60962730 + PRKAR1B chr7 647089 - Exonic hg19 Non-Cancer ERR315359 2 0 3'UTR-CDS Inter-chr q13.33 p22.3 131061 ChimerSeq STARFusion 1000Genome CTTN-SLC11A2 CTTN chr11 70269081 + SLC11A2 chr12 51375514 - Exonic hg19 Non-Cancer ERR315358 3 0 Out-of-frame Inter-chr q13.3 q13.12 131062 ChimerSeq STARFusion 1000Genome ACTR3-FAM104B ACTR3 chr2 114699936 + FAM104B chrX 55172744 - Exonic hg19 Non-Cancer ERR315358 2 0 In-Frame Inter-chr q14.1 p11.21 131063 ChimerSeq STARFusion 1000Genome RPL5-HMGN1 RPL5 chr1 93297674 + HMGN1 chr21 40717200 - Exonic hg19 Non-Cancer ERR315358 2 0 In-Frame Inter-chr p22.1 Tumor suppressor gene q22.2 131064 ChimerSeq STARFusion 1000Genome SRP54-PPIE SRP54 chr14 35497389 + PPIE chr1 40205837 + Exonic hg19 Non-Cancer ERR315358 2 0 In-Frame Inter-chr q13.2 p34.2 131065 ChimerSeq STARFusion 1000Genome SUPT3H-RPL10A SUPT3H chr6 45332938 - RPL10A chr6 35436576 + Exonic hg19 Non-Cancer ERR315358 2 0 Out-of-frame Intra-chr p21.1 p21.31 131066 ChimerSeq STARFusion 1000Genome DNAJC25-UGCG DNAJC25 chr9 114429226 + UGCG chr9 114676885 + Exonic hg19 Non-Cancer ERR315356 2 1 Out-of-frame Intra-chr q31.3 q31.3 131067 ChimerSeq STARFusion 1000Genome COQ6-LCLAT1 COQ6 chr14 74422631 + LCLAT1 chr2 30775359 + Exonic hg19 Non-Cancer ERR315356 2 0 Out-of-frame Inter-chr q24.3 p23.1 131068 ChimerSeq STARFusion 1000Genome GRIK2-PRKD3 GRIK2 chr6 102134228 + PRKD3 chr2 37520414 - Exonic hg19 Non-Cancer ERR315356 2 0 In-Frame Inter-chr q16.3 p22.2 131069 ChimerSeq STARFusion 1000Genome IGH@-ANGPTL2 IGH@ chr14 106805207 - ANGPTL2 chr9 129870675 - Exonic hg19 Non-Cancer ERR315355 4 2 Out-of-frame Inter-chr 32.33 q33.3 Tumor suppressor gene 131070 ChimerSeq STARFusion 1000Genome SP140-IGKC SP140 chr2 231177837 + IGKC chr2 89160768 - Exonic hg19 Non-Cancer ERR315355 4 1 Out-of-frame Intra-chr q37.1 Transcription factor p11.2 131071 ChimerSeq STARFusion 1000Genome SP140-IGKC SP140 chr2 231177840 + IGKC chr2 89161069 - Exonic hg19 Non-Cancer ERR315355 3 1 Out-of-frame Intra-chr q37.1 Transcription factor p11.2 131072 ChimerSeq STARFusion 1000Genome COL27A1-IGKC COL27A1 chr9 117035939 + IGKC chr2 89160429 - Exonic hg19 Non-Cancer ERR315355 3 0 Out-of-frame Inter-chr q32 p11.2 131073 ChimerSeq STARFusion 1000Genome COL27A1-IGKC COL27A1 chr9 117035939 + IGKC chr2 89160764 - Exonic hg19 Non-Cancer ERR315355 3 0 Out-of-frame Inter-chr q32 p11.2 131074 ChimerSeq STARFusion 1000Genome COL27A1-IGKJ3 COL27A1 chr9 117035939 + IGKJ3 chr2 89160764 - Exonic hg19 Non-Cancer ERR315355 3 0 Out-of-frame Inter-chr q32 p11.2 131075 ChimerSeq STARFusion 1000Genome COL27A1-IGKJ4 COL27A1 chr9 117035939 + IGKJ4 chr2 89160429 - Exonic hg19 Non-Cancer ERR315355 3 0 Out-of-frame Inter-chr q32 p11.2 131076 ChimerSeq STARFusion 1000Genome GAS6-IGHG2 GAS6 chr13 114525073 - IGHG2 chr14 106111130 - Exonic hg19 Non-Cancer ERR315355 3 0 Out-of-frame Inter-chr q34 Oncogene 131077 ChimerSeq STARFusion 1000Genome CTNNB1-L2HGDH CTNNB1 chr3 41280845 + L2HGDH chr14 50713971 - Exonic hg19 Non-Cancer ERR315355 2 0 3'UTR-CDS Inter-chr p22.1 Oncogene q21.3 131078 ChimerSeq STARFusion 1000Genome IFT122-RYK IFT122 chr3 129168780 + RYK chr3 133914026 - Exonic hg19 Non-Cancer ERR315355 2 0 Out-of-frame Intra-chr q21.3 q22.2 TK:Ryk 131079 ChimerSeq STARFusion 1000Genome NXN-CAV1 NXN chr17 882559 - CAV1 chr7 116166579 + Exonic hg19 Non-Cancer ERR315355 2 0 Out-of-frame Inter-chr p13.3 q31.2 Tumor suppressor gene 131080 ChimerSeq STARFusion 1000Genome PRKCH-PRPS2 PRKCH chr14 61952374 + PRPS2 chrX 12827353 + Exonic hg19 Non-Cancer ERR315355 2 0 Out-of-frame Inter-chr q23.1 p22.2 131081 ChimerSeq STARFusion 1000Genome TBC1D22A-DOK7 TBC1D22A chr22 47158745 + DOK7 chr4 3487266 + Exonic hg19 Non-Cancer ERR315354 2 0 In-Frame Inter-chr q13.31 p16.3 131082 ChimerSeq STARFusion 1000Genome MYH9-SFTPC MYH9 chr22 36689425 - SFTPC chr8 22019318 + Exonic hg19 Non-Cancer ERR315353 3 4 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene p21.3 131083 ChimerSeq STARFusion 1000Genome ZC3H18-ZFPM1 ZC3H18 chr16 88653092 + ZFPM1 chr16 88552347 + Exonic hg19 Non-Cancer ERR315353 3 3 In-Frame Intra-chr q24.2 q24.2 Transcription factor 131084 ChimerSeq STARFusion 1000Genome EGFR-EMP1 EGFR chr7 55273138 + EMP1 chr12 13349769 + Exonic hg19 Non-Cancer ERR315353 3 0 Out-of-frame Inter-chr p11.2 TK:EGFR Oncogene p13.1 Tumor suppressor gene 131085 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315353 3 0 Out-of-frame Intra-chr p11.2 131086 ChimerSeq STARFusion 1000Genome CD99L2-PICALM CD99L2 chrX 149983335 - PICALM chr11 85742653 - Exonic hg19 Non-Cancer ERR315353 2 0 In-Frame Inter-chr q28 q14.2 131087 ChimerSeq STARFusion 1000Genome CMC1-ANXA2 CMC1 chr3 28304871 + ANXA2 chr15 60656722 - Exonic hg19 Non-Cancer ERR315353 2 0 In-Frame Inter-chr p24.1 q22.2 131088 ChimerSeq STARFusion 1000Genome COL6A1-SFTPC COL6A1 chr21 47410198 + SFTPC chr8 22019311 + Exonic hg19 Non-Cancer ERR315353 2 0 CDS-5'UTR Inter-chr q22.3 p21.3 131089 ChimerSeq STARFusion 1000Genome EFNB2-ARGLU1 EFNB2 chr13 107187191 - ARGLU1 chr13 107212005 - Exonic hg19 Non-Cancer ERR315353 2 0 In-Frame Intra-chr q33.3 q33.3 131090 ChimerSeq STARFusion 1000Genome PARVA-STK24 PARVA chr11 12399330 + STK24 chr13 99134575 - Exonic hg19 Non-Cancer ERR315353 2 0 Out-of-frame Inter-chr p15.3 q32.2 131091 ChimerSeq STARFusion 1000Genome PCDH17-PAXBP1 PCDH17 chr13 58240967 + PAXBP1 chr21 34107378 - Exonic hg19 Non-Cancer ERR315353 2 0 Out-of-frame Inter-chr q21.1 Tumor suppressor gene 131092 ChimerSeq STARFusion 1000Genome PPP2R5C-ABCG1 PPP2R5C chr14 102252520 + ABCG1 chr21 43691180 + Exonic hg19 Non-Cancer ERR315353 2 0 In-Frame Inter-chr q32.31 Tumor suppressor gene q22.3 131093 ChimerSeq STARFusion 1000Genome VEGFA-ARHGAP21 VEGFA chr6 43745402 + ARHGAP21 chr10 24880259 - Exonic hg19 Non-Cancer ERR315353 2 0 In-Frame Inter-chr p21.1 Tumor suppressor gene p12.1 131094 ChimerSeq STARFusion 1000Genome ZNF33A-CTAGE5 ZNF33A chr10 38305943 + CTAGE5 chr14 39819302 + Exonic hg19 Non-Cancer ERR315353 2 0 In-Frame Inter-chr p11.1 Transcription factor q21.1 131095 ChimerSeq STARFusion 1000Genome GUSBP2-C1QTNF3 GUSBP2 chr6 26839903 - C1QTNF3 chr5 34035863 - Exonic hg19 Non-Cancer ERR315352 2 2 3'UTR-CDS Inter-chr p22.2 p13.2 131096 ChimerSeq STARFusion 1000Genome HNRNPA2B1-ATP6V1B2 HNRNPA2B1 chr7 26231895 - ATP6V1B2 chr8 20078726 + Exonic hg19 Non-Cancer ERR315351 3 0 Out-of-frame Inter-chr p15.2 p21.3 131097 ChimerSeq STARFusion 1000Genome MARS-ACTB MARS chr12 57881292 + ACTB chr7 5567332 - Exonic hg19 Non-Cancer ERR315351 3 0 Out-of-frame Inter-chr q13.3 p22.1 131098 ChimerSeq STARFusion 1000Genome TMEM202-ARIH1 TMEM202 chr15 72699092 + ARIH1 chr15 72810408 + Exonic hg19 Non-Cancer ERR315351 2 1 Out-of-frame Intra-chr q23 q24.1 131099 ChimerSeq STARFusion 1000Genome IP6K3-C1orf63 IP6K3 chr6 33703055 - C1orf63 chr1 25570124 - Exonic hg19 Non-Cancer ERR315351 2 0 Out-of-frame Inter-chr p21.31 131100 ChimerSeq STARFusion 1000Genome ODF1-ZNF706 ODF1 chr8 103564275 + ZNF706 chr8 102213971 - Exonic hg19 Non-Cancer ERR315351 2 0 CDS-5'UTR Intra-chr q22.3 q22.3 Transcription factor 131101 ChimerSeq STARFusion 1000Genome FOPNL-C16orf62 FOPNL chr16 15982415 - C16orf62 chr16 19592847 + Exonic hg19 Non-Cancer ERR315350 2 0 Out-of-frame Intra-chr p13.11 p12.3 131102 ChimerSeq STARFusion 1000Genome HIATL1-HABP4 HIATL1 chr9 97200810 + HABP4 chr9 99220661 + Exonic hg19 Non-Cancer ERR315350 2 0 Out-of-frame Intra-chr q22.32 131103 ChimerSeq STARFusion 1000Genome OBSL1-CHPF OBSL1 chr2 220416251 - CHPF chr2 220406911 - Exonic hg19 Non-Cancer ERR315350 2 0 Out-of-frame Intra-chr q35 q35 131104 ChimerSeq STARFusion 1000Genome RPRD1A-CEP192 RPRD1A chr18 33606863 - CEP192 chr18 13124631 + Exonic hg19 Non-Cancer ERR315350 2 0 Out-of-frame Intra-chr q12.2 p11.21 131105 ChimerSeq STARFusion 1000Genome ZNF385D-UBE2D2 ZNF385D chr3 22210309 - UBE2D2 chr5 138979957 + Exonic hg19 Non-Cancer ERR315350 2 0 Out-of-frame Inter-chr p24.3 Transcription factor q31.2 131106 ChimerSeq STARFusion 1000Genome COA1-TMEM123 COA1 chr7 43769028 - TMEM123 chr11 102272937 - Exonic hg19 Non-Cancer ERR315458 2 0 Out-of-frame Inter-chr p13 q22.2 131107 ChimerSeq STARFusion 1000Genome MSI2-ERICH1 MSI2 chr17 55607085 + ERICH1 chr8 624047 - Exonic hg19 Non-Cancer ERR315458 2 0 In-Frame Inter-chr q22 131108 ChimerSeq STARFusion 1000Genome TBC1D5-SET TBC1D5 chr3 17469942 - SET chr9 131453449 + Exonic hg19 Non-Cancer ERR315458 2 0 Out-of-frame Inter-chr p24.3 q34.11 131109 ChimerSeq STARFusion 1000Genome HTN3-STATH HTN3 chr4 70894233 + STATH chr4 70864142 + Exonic hg19 Non-Cancer ERR315459 32 178 5'UTR-5'UTR Intra-chr 131110 ChimerSeq STARFusion 1000Genome CST1-SMR3B CST1 chr20 23728418 - SMR3B chr4 71255728 + Exonic hg19 Non-Cancer ERR315459 15 208 Out-of-frame Inter-chr p11.21 q13.3 131111 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083470 + SMR3B chr4 71255558 + Exonic hg19 Non-Cancer ERR315459 14 180 Out-of-frame Inter-chr q13.3 131112 ChimerSeq STARFusion 1000Genome HTN3-STATH HTN3 chr4 70898970 + STATH chr4 70867906 + Exonic hg19 Non-Cancer ERR315459 20 143 3'UTR-3'UTR Intra-chr 131113 ChimerSeq STARFusion 1000Genome CST1-SMR3B CST1 chr20 23728427 - SMR3B chr4 71255719 + Exonic hg19 Non-Cancer ERR315459 6 196 Out-of-frame Inter-chr p11.21 q13.3 131114 ChimerSeq STARFusion 1000Genome SMR3B-STATH SMR3B chr4 71255727 + STATH chr4 70866639 + Exonic hg19 Non-Cancer ERR315459 4 189 Out-of-frame Intra-chr q13.3 131115 ChimerSeq STARFusion 1000Genome HTN3-STATH HTN3 chr4 70918817 + STATH chr4 70864179 + Exonic hg19 Non-Cancer ERR315459 4 177 Out-of-frame Intra-chr 131116 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083460 + SMR3B chr4 71255548 + Exonic hg19 Non-Cancer ERR315459 14 136 Out-of-frame Inter-chr q13.3 131117 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11035142 - SMR3B chr4 71255471 + Exonic hg19 Non-Cancer ERR315459 13 124 Out-of-frame Inter-chr q13.3 131118 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083416 + SMR3B chr4 71255549 + Exonic hg19 Non-Cancer ERR315459 9 136 Out-of-frame Inter-chr q13.3 131119 ChimerSeq STARFusion 1000Genome HTN3-STATH HTN3 chr4 70894233 + STATH chr4 70864140 + Exonic hg19 Non-Cancer ERR315459 7 143 5'UTR-5'UTR Intra-chr 131120 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083464 + SMR3B chr4 71255507 + Exonic hg19 Non-Cancer ERR315459 6 136 Out-of-frame Inter-chr q13.3 131121 ChimerSeq STARFusion 1000Genome SMR3B-STATH SMR3B chr4 71255722 + STATH chr4 70866625 + Exonic hg19 Non-Cancer ERR315459 3 141 Out-of-frame Intra-chr q13.3 131122 ChimerSeq STARFusion 1000Genome SMR3B-STATH SMR3B chr4 71255794 + STATH chr4 70867967 + Exonic hg19 Non-Cancer ERR315459 3 141 Out-of-frame Intra-chr q13.3 131123 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083416 + SMR3B chr4 71255471 + Exonic hg19 Non-Cancer ERR315459 3 136 Out-of-frame Inter-chr q13.3 131124 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083473 + SMR3B chr4 71255516 + Exonic hg19 Non-Cancer ERR315459 3 136 Out-of-frame Inter-chr q13.3 131125 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083515 + SMR3B chr4 71255471 + Exonic hg19 Non-Cancer ERR315459 3 136 Out-of-frame Inter-chr q13.3 131126 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083515 + SMR3B chr4 71255549 + Exonic hg19 Non-Cancer ERR315459 3 136 Out-of-frame Inter-chr q13.3 131127 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083581 + SMR3B chr4 71255471 + Exonic hg19 Non-Cancer ERR315459 3 136 Out-of-frame Inter-chr q13.3 131128 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083581 + SMR3B chr4 71255549 + Exonic hg19 Non-Cancer ERR315459 3 136 Out-of-frame Inter-chr q13.3 131129 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11035031 - SMR3B chr4 71255507 + Exonic hg19 Non-Cancer ERR315459 6 121 Out-of-frame Inter-chr q13.3 131130 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11035025 - SMR3B chr4 71255558 + Exonic hg19 Non-Cancer ERR315459 13 86 Out-of-frame Inter-chr q13.3 131131 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11035035 - SMR3B chr4 71255548 + Exonic hg19 Non-Cancer ERR315459 13 86 Out-of-frame Inter-chr q13.3 131132 ChimerSeq STARFusion 1000Genome SMR3B-PRH2 SMR3B chr4 71255566 + PRH2 chr12 11083408 + Exonic hg19 Non-Cancer ERR315459 9 97 Out-of-frame Inter-chr q13.3 131133 ChimerSeq STARFusion 1000Genome SMR3B-PRR4 SMR3B chr4 71255566 + PRR4 chr12 11035087 - Exonic hg19 Non-Cancer ERR315459 9 96 Out-of-frame Inter-chr q13.3 131134 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11035142 - SMR3B chr4 71255549 + Exonic hg19 Non-Cancer ERR315459 10 86 Out-of-frame Inter-chr q13.3 131135 ChimerSeq STARFusion 1000Genome CST1-SMR3B CST1 chr20 23728409 - SMR3B chr4 71255560 + Exonic hg19 Non-Cancer ERR315459 5 97 Out-of-frame Inter-chr p11.21 q13.3 131136 ChimerSeq STARFusion 1000Genome CST1-SMR3B CST1 chr20 23728417 - SMR3B chr4 71255551 + Exonic hg19 Non-Cancer ERR315459 5 97 Out-of-frame Inter-chr p11.21 q13.3 131137 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11035142 - SMR3B chr4 71255727 + Exonic hg19 Non-Cancer ERR315459 7 86 Out-of-frame Inter-chr q13.3 131138 ChimerSeq STARFusion 1000Genome CST1-SMR3B CST1 chr20 23666495 - SMR3B chr4 71255551 + Exonic hg19 Non-Cancer ERR315459 3 97 Out-of-frame Inter-chr p11.21 q13.3 131139 ChimerSeq STARFusion 1000Genome CST1-SMR3B CST1 chr20 23728234 - SMR3B chr4 71255547 + Exonic hg19 Non-Cancer ERR315459 3 97 Out-of-frame Inter-chr p11.21 q13.3 131140 ChimerSeq STARFusion 1000Genome CST1-SMR3B CST1 chr20 23728390 - SMR3B chr4 71255508 + Exonic hg19 Non-Cancer ERR315459 3 97 Out-of-frame Inter-chr p11.21 q13.3 131141 ChimerSeq STARFusion 1000Genome CST1-SMR3B CST1 chr20 23728404 - SMR3B chr4 71255554 + Exonic hg19 Non-Cancer ERR315459 3 97 Out-of-frame Inter-chr p11.21 q13.3 131142 ChimerSeq STARFusion 1000Genome SMR3B-PRR4 SMR3B chr4 71255549 + PRR4 chr12 11035077 - Exonic hg19 Non-Cancer ERR315459 4 92 Out-of-frame Inter-chr q13.3 131143 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11034914 - SMR3B chr4 71255549 + Exonic hg19 Non-Cancer ERR315459 5 86 Out-of-frame Inter-chr q13.3 131144 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11035079 - SMR3B chr4 71255471 + Exonic hg19 Non-Cancer ERR315459 5 86 Out-of-frame Inter-chr q13.3 131145 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11035142 - SMR3B chr4 71255507 + Exonic hg19 Non-Cancer ERR315459 5 86 Out-of-frame Inter-chr q13.3 131146 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11034932 - SMR3B chr4 71255549 + Exonic hg19 Non-Cancer ERR315459 4 86 Out-of-frame Inter-chr q13.3 131147 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11035031 - SMR3B chr4 71255471 + Exonic hg19 Non-Cancer ERR315459 4 86 Out-of-frame Inter-chr q13.3 131148 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11034914 - SMR3B chr4 71255471 + Exonic hg19 Non-Cancer ERR315459 3 86 Out-of-frame Inter-chr q13.3 131149 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11034914 - SMR3B chr4 71255576 + Exonic hg19 Non-Cancer ERR315459 3 86 Out-of-frame Inter-chr q13.3 131150 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11034980 - SMR3B chr4 71255549 + Exonic hg19 Non-Cancer ERR315459 3 86 Out-of-frame Inter-chr q13.3 131151 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11035027 - SMR3B chr4 71255681 + Exonic hg19 Non-Cancer ERR315459 3 86 Out-of-frame Inter-chr q13.3 131152 ChimerSeq STARFusion 1000Genome SMR3B-PRH2 SMR3B chr4 71255549 + PRH2 chr12 11083418 + Exonic hg19 Non-Cancer ERR315459 3 78 Out-of-frame Inter-chr q13.3 131153 ChimerSeq STARFusion 1000Genome SMR3B-PRR4 SMR3B chr4 71255549 + PRR4 chr12 11035140 - Exonic hg19 Non-Cancer ERR315459 3 77 Out-of-frame Inter-chr q13.3 131154 ChimerSeq STARFusion 1000Genome PRH2-CST4 PRH2 chr12 11083311 + CST4 chr20 23666578 - Exonic hg19 Non-Cancer ERR315459 4 69 Out-of-frame Inter-chr p11.21 131155 ChimerSeq STARFusion 1000Genome SMR3B-PRH2 SMR3B chr4 71255506 + PRH2 chr12 11083417 + Exonic hg19 Non-Cancer ERR315459 3 50 Out-of-frame Inter-chr q13.3 131156 ChimerSeq STARFusion 1000Genome SMR3B-PRR4 SMR3B chr4 71255460 + PRR4 chr12 11035087 - Exonic hg19 Non-Cancer ERR315459 3 49 Out-of-frame Inter-chr q13.3 131157 ChimerSeq STARFusion 1000Genome SMR3B-PRR4 SMR3B chr4 71255506 + PRR4 chr12 11035141 - Exonic hg19 Non-Cancer ERR315459 3 49 Out-of-frame Inter-chr q13.3 131158 ChimerSeq STARFusion 1000Genome MUC7-PRH2 MUC7 chr4 71347209 + PRH2 chr12 11083417 + Exonic hg19 Non-Cancer ERR315459 3 28 Out-of-frame Inter-chr q13.3 131159 ChimerSeq STARFusion 1000Genome MUC7-CA6 MUC7 chr4 71347259 + CA6 chr1 9027781 + Exonic hg19 Non-Cancer ERR315459 3 2 Out-of-frame Inter-chr q13.3 p36.23 131160 ChimerSeq STARFusion 1000Genome ERP44-UBQLN1 ERP44 chr9 102814699 - UBQLN1 chr9 86284242 - Exonic hg19 Non-Cancer ERR315459 2 0 In-Frame Intra-chr q31.1 q21.32 131161 ChimerSeq STARFusion 1000Genome MYO5C-RABGAP1 MYO5C chr15 52587807 - RABGAP1 chr9 125852037 + Exonic hg19 Non-Cancer ERR315459 2 0 Out-of-frame Inter-chr q21.2 q33.2 131162 ChimerSeq STARFusion 1000Genome C4orf22-BMP3 C4orf22 chr4 81866093 + BMP3 chr4 81966892 + Exonic hg19 Non-Cancer ERR315441 2 0 CDS-5'UTR Intra-chr q21.21 q21.21 131163 ChimerSeq STARFusion 1000Genome C6orf62-ZCCHC7 C6orf62 chr6 24714546 - ZCCHC7 chr9 37126309 + Exonic hg19 Non-Cancer ERR315441 2 0 Out-of-frame Inter-chr p22.3 p13.2 131164 ChimerSeq STARFusion 1000Genome ECD-LPHN3 ECD chr10 74894361 - LPHN3 chr4 62248842 + Exonic hg19 Non-Cancer ERR315450 2 0 Out-of-frame Inter-chr q22.2 131165 ChimerSeq STARFusion 1000Genome SERPINA1-MTATP8P1 SERPINA1 chr14 94849455 - MTATP8P1 chr1 568950 + Exonic hg19 Non-Cancer ERR315451 4 4 Out-of-frame Inter-chr q32.13 p36.33 131166 ChimerSeq STARFusion 1000Genome HPR-SERPINA1 HPR chr16 72110932 + SERPINA1 chr14 94847401 - Exonic hg19 Non-Cancer ERR315451 3 4 Out-of-frame Inter-chr q22.2 q32.13 131167 ChimerSeq STARFusion 1000Genome SERPINA1-MTATP8P1 SERPINA1 chr14 94849425 - MTATP8P1 chr1 568954 + Exonic hg19 Non-Cancer ERR315451 3 4 Out-of-frame Inter-chr q32.13 p36.33 131168 ChimerSeq STARFusion 1000Genome SERPINA1-MTATP8P1 SERPINA1 chr14 94849377 - MTATP8P1 chr1 568944 + Exonic hg19 Non-Cancer ERR315451 3 2 Out-of-frame Inter-chr q32.13 p36.33 131169 ChimerSeq STARFusion 1000Genome CYP4A11-ALB CYP4A11 chr1 47395620 - ALB chr4 74270011 + Exonic hg19 Non-Cancer ERR315451 3 1 Out-of-frame Inter-chr p33 q13.3 131170 ChimerSeq STARFusion 1000Genome OGDH-TRIM24 OGDH chr7 44687358 + TRIM24 chr7 138189035 + Exonic hg19 Non-Cancer ERR315451 2 0 In-Frame Intra-chr p13 q33 Oncogene Tumor suppressor gene 131171 ChimerSeq STARFusion 1000Genome CCDC152-PRRC2A CCDC152 chr5 42800804 + PRRC2A chr6 31600512 + Exonic hg19 Non-Cancer ERR315452 3 0 Out-of-frame Inter-chr p12 131172 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315452 3 0 Out-of-frame Intra-chr p11.2 131173 ChimerSeq STARFusion 1000Genome HERC2-FAM192A HERC2 chr15 28389019 - FAM192A chr16 57207781 - Exonic hg19 Non-Cancer ERR315440 2 0 CDS-5'UTR Inter-chr q13 131174 ChimerSeq STARFusion 1000Genome C22orf39-IGHG2 C22orf39 chr22 19344505 - IGHG2 chr14 106111128 - Exonic hg19 Non-Cancer ERR315454 5 1 Out-of-frame Inter-chr q11.21 131175 ChimerSeq STARFusion 1000Genome HIRA-IGHG2 HIRA chr22 19344505 - IGHG2 chr14 106111128 - Exonic hg19 Non-Cancer ERR315454 5 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 131176 ChimerSeq STARFusion 1000Genome C22orf39-IGHG2 C22orf39 chr22 19344505 - IGHG2 chr14 106209409 - Exonic hg19 Non-Cancer ERR315454 4 1 Out-of-frame Inter-chr q11.21 131177 ChimerSeq STARFusion 1000Genome HIRA-IGHG2 HIRA chr22 19344505 - IGHG2 chr14 106209409 - Exonic hg19 Non-Cancer ERR315454 4 1 Out-of-frame Inter-chr q11.21 Tumor suppressor gene 131178 ChimerSeq STARFusion 1000Genome SMAP2-TNK2 SMAP2 chr1 40810582 + TNK2 chr3 195615477 - Exonic hg19 Non-Cancer ERR315454 2 0 5'UTR-5'UTR Inter-chr p34.2 q29 Oncogene 131179 ChimerSeq STARFusion 1000Genome RN7SL704P-YWHAB RN7SL704P chr22 38628008 + YWHAB chr20 43536093 + Exonic hg19 Non-Cancer ERR315455 6 0 Out-of-frame Inter-chr q13.1 q13.12 131180 ChimerSeq STARFusion 1000Genome RTN4-THSD7A RTN4 chr2 55199949 - THSD7A chr7 11411389 - Exonic hg19 Non-Cancer ERR315455 4 0 Out-of-frame Inter-chr p16.1 Tumor suppressor gene p21.3 131181 ChimerSeq STARFusion 1000Genome DNAJC25-UGCG DNAJC25 chr9 114429226 + UGCG chr9 114676885 + Exonic hg19 Non-Cancer ERR315455 3 2 Out-of-frame Intra-chr q31.3 q31.3 131182 ChimerSeq STARFusion 1000Genome HRSP12-AKAP7 HRSP12 chr8 99129260 - AKAP7 chr6 131520601 + Exonic hg19 Non-Cancer ERR315455 3 0 Out-of-frame Inter-chr q23.2 131183 ChimerSeq STARFusion 1000Genome IGSF3-SNRPD3 IGSF3 chr1 117131316 - SNRPD3 chr22 25003921 + Exonic hg19 Non-Cancer ERR315456 2 2 Out-of-frame Inter-chr p13.1 q11.23 131184 ChimerSeq STARFusion 1000Genome CYP3A4-ITGAV CYP3A4 chr7 99381634 - ITGAV chr2 187540331 + Exonic hg19 Non-Cancer ERR315457 2 0 Out-of-frame Inter-chr q22.1 q32.1 Tumor suppressor gene 131185 ChimerSeq STARFusion 1000Genome ECHDC2-PPP6R3 ECHDC2 chr1 53387225 - PPP6R3 chr11 68286969 + Exonic hg19 Non-Cancer ERR315457 2 0 Out-of-frame Inter-chr p32.3 q13.2 131186 ChimerSeq STARFusion 1000Genome IWS1-OPTN IWS1 chr2 128283751 - OPTN chr10 13165995 + Exonic hg19 Non-Cancer ERR315457 2 0 Out-of-frame Inter-chr q14.3 p13 131187 ChimerSeq STARFusion 1000Genome WBP11-MAD1L1 WBP11 chr12 14956286 - MAD1L1 chr7 2188873 - Exonic hg19 Non-Cancer ERR315457 2 0 5'UTR-CDS Inter-chr p12.3 p22.3 Tumor suppressor gene 131188 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315340 3 0 Out-of-frame Intra-chr p11.2 131189 ChimerSeq STARFusion 1000Genome TMPRSS2-ERG TMPRSS2 chr21 42880008 - ERG chr21 39817544 - Exonic hg19 Non-Cancer ERR315340 3 0 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131190 ChimerSeq STARFusion 1000Genome DHX9-ARF1 DHX9 chr1 182808591 + ARF1 chr1 228284779 + Exonic hg19 Non-Cancer ERR315340 2 0 5'UTR-5'UTR Intra-chr q25.3 q42.13 Tumor suppressor gene 131191 ChimerSeq STARFusion 1000Genome DSC3-UBC DSC3 chr18 28622558 - UBC chr12 125398320 - Exonic hg19 Non-Cancer ERR315340 2 0 CDS-5'UTR Inter-chr q12.1 Tumor suppressor gene q24.31 131192 ChimerSeq STARFusion 1000Genome UHRF1BP1L-AGAP1 UHRF1BP1L chr12 100441308 - AGAP1 chr2 236649607 + Exonic hg19 Non-Cancer ERR315340 2 0 Out-of-frame Inter-chr q23.1 q37.2 131193 ChimerSeq STARFusion 1000Genome FKBP5-TARBP1 FKBP5 chr6 35656581 - TARBP1 chr1 234541845 - Exonic hg19 Non-Cancer ERR315342 4 0 5'UTR-CDS Inter-chr p21.31 q42.2 131194 ChimerSeq STARFusion 1000Genome POLR2L-COL1A1 POLR2L chr11 837522 - COL1A1 chr17 48276608 - Exonic hg19 Non-Cancer ERR315342 4 0 Out-of-frame Inter-chr p15.5 q21.33 Oncogene 131195 ChimerSeq STARFusion 1000Genome ACAP2-KPNA4 ACAP2 chr3 195112819 - KPNA4 chr3 160254628 - Exonic hg19 Non-Cancer ERR315342 3 0 In-Frame Intra-chr q29 q25.33 131196 ChimerSeq STARFusion 1000Genome GPX3-SPARC GPX3 chr5 150406580 + SPARC chr5 151047095 - Exonic hg19 Non-Cancer ERR315342 3 0 Out-of-frame Intra-chr q33.1 Tumor suppressor gene q33.1 Tumor suppressor gene 131197 ChimerSeq STARFusion 1000Genome ITGB5-CAV1 ITGB5 chr3 124482013 - CAV1 chr7 116199668 + Exonic hg19 Non-Cancer ERR315342 3 0 Out-of-frame Inter-chr q21.2 q31.2 Tumor suppressor gene 131198 ChimerSeq STARFusion 1000Genome MARCH2-FABP4 2019_ 3_ 2_ chr19 8503553 + FABP4 chr8 82395386 - Exonic hg19 Non-Cancer ERR315342 3 0 Out-of-frame Inter-chr p13.2 q21.13 131199 ChimerSeq STARFusion 1000Genome MYH11-RGAG4 MYH11 chr16 15853492 - RGAG4 chrX 71350755 - Exonic hg19 Non-Cancer ERR315342 3 0 Out-of-frame Inter-chr Oncogene 131200 ChimerSeq STARFusion 1000Genome PC-CSDE1 PC chr11 66616353 - CSDE1 chr1 115269670 - Exonic hg19 Non-Cancer ERR315342 3 0 Out-of-frame Inter-chr q13.2 p13.2 131201 ChimerSeq STARFusion 1000Genome RANBP3L-FAM213A RANBP3L chr5 36269492 - FAM213A chr10 82191742 + Exonic hg19 Non-Cancer ERR315342 3 0 Out-of-frame Inter-chr p13.2 q23.1 131202 ChimerSeq STARFusion 1000Genome SMC6-USP53 SMC6 chr2 17863090 - USP53 chr4 120214982 + Exonic hg19 Non-Cancer ERR315342 3 0 Out-of-frame Inter-chr p24.2 q26 131203 ChimerSeq STARFusion 1000Genome TNS1-EIF4G1 TNS1 chr2 218712721 - EIF4G1 chr3 184044388 + Exonic hg19 Non-Cancer ERR315342 3 0 Out-of-frame Inter-chr q35 q27.1 131204 ChimerSeq STARFusion 1000Genome USP25-NRIP1 USP25 chr21 17214859 + NRIP1 chr21 16386787 - Exonic hg19 Non-Cancer ERR315342 3 0 CDS-5'UTR Intra-chr q21.1 q21.1 131205 ChimerSeq STARFusion 1000Genome GNAQ-MAD1L1 GNAQ chr9 80409379 - MAD1L1 chr7 1855864 - Exonic hg19 Non-Cancer ERR315345 2 0 In-Frame Inter-chr q21.2 Oncogene p22.3 Tumor suppressor gene 131206 ChimerSeq STARFusion 1000Genome STAT5B-B2M STAT5B chr17 40428266 - B2M chr15 45007621 + Exonic hg19 Non-Cancer ERR315345 2 0 Out-of-frame Inter-chr q21.2 Transcription factor Oncogene 131207 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315346 6 0 Out-of-frame Intra-chr p11.2 131208 ChimerSeq STARFusion 1000Genome TSIX-SFTPC TSIX chrX 73047340 + SFTPC chr8 22019319 + Exonic hg19 Non-Cancer ERR315346 3 1 Out-of-frame Inter-chr q13.2 p21.3 131209 ChimerSeq STARFusion 1000Genome FTH1P10-FTL FTH1P10 chr5 17354387 - FTL chr19 49469059 + Exonic hg19 Non-Cancer ERR315347 3 0 Out-of-frame Inter-chr p15.1 q13.33 131210 ChimerSeq STARFusion 1000Genome CNR2-H3F3A CNR2 chr1 24275916 - H3F3A chr1 226252030 + Exonic hg19 Non-Cancer ERR315347 2 0 Out-of-frame Intra-chr p36.11 q42.12 Oncogene 131211 ChimerSeq STARFusion 1000Genome DPP6-FBXO4 DPP6 chr7 154645537 + FBXO4 chr5 41927115 + Exonic hg19 Non-Cancer ERR315348 2 0 Out-of-frame Inter-chr p13.1 131212 ChimerSeq STARFusion 1000Genome SMG1-ZNF623 SMG1 chr16 18869492 - ZNF623 chr8 144732068 + Exonic hg19 Non-Cancer ERR315348 2 0 Out-of-frame Inter-chr p12.3 Atypical:PIKK Transcription factor 131213 ChimerSeq STARFusion 1000Genome HSPA1A-SLC9A3R1 HSPA1A chr6 31785221 + SLC9A3R1 chr17 72745398 + Exonic hg19 Non-Cancer ERR315349 3 1 Out-of-frame Inter-chr q25.1 Tumor suppressor gene 131214 ChimerSeq STARFusion 1000Genome HSPA1A-SLC9A3R1 HSPA1A chr6 31797415 + SLC9A3R1 chr17 72745398 + Exonic hg19 Non-Cancer ERR315349 3 1 Out-of-frame Inter-chr q25.1 Tumor suppressor gene 131215 ChimerSeq STARFusion 1000Genome LSM7-IQGAP1 LSM7 chr19 2328386 - IQGAP1 chr15 91030186 + Exonic hg19 Non-Cancer ERR315349 2 0 Out-of-frame Inter-chr p13.3 q26.1 131216 ChimerSeq STARFusion 1000Genome ZFX-ZC2HC1A ZFX chrX 24167370 + ZC2HC1A chr8 79601457 + Exonic hg19 Non-Cancer ERR315349 2 0 Out-of-frame Inter-chr p22.11 Transcription factor q21.13 131217 ChimerSeq STARFusion 1000Genome PRB3-SMR3B PRB3 chr12 11420714 - SMR3B chr4 71255507 + Exonic hg19 Non-Cancer ERR315449 5 106 Out-of-frame Inter-chr p13.2 q13.3 131218 ChimerSeq STARFusion 1000Genome HTN3-STATH HTN3 chr4 70898970 + STATH chr4 70867906 + Exonic hg19 Non-Cancer ERR315449 12 64 3'UTR-3'UTR Intra-chr 131219 ChimerSeq STARFusion 1000Genome HTN3-STATH HTN3 chr4 70894233 + STATH chr4 70864142 + Exonic hg19 Non-Cancer ERR315449 10 52 5'UTR-5'UTR Intra-chr 131220 ChimerSeq STARFusion 1000Genome PRB3-SMR3B PRB3 chr12 11420778 - SMR3B chr4 71255554 + Exonic hg19 Non-Cancer ERR315449 4 67 Out-of-frame Inter-chr p13.2 q13.3 131221 ChimerSeq STARFusion 1000Genome PRB3-SMR3B PRB3 chr12 11420979 - SMR3B chr4 71255563 + Exonic hg19 Non-Cancer ERR315449 4 67 Out-of-frame Inter-chr p13.2 q13.3 131222 ChimerSeq STARFusion 1000Genome PRB3-SMR3B PRB3 chr12 11420255 - SMR3B chr4 71255594 + Exonic hg19 Non-Cancer ERR315449 3 67 Out-of-frame Inter-chr p13.2 q13.3 131223 ChimerSeq STARFusion 1000Genome PRB3-SMR3B PRB3 chr12 11420304 - SMR3B chr4 71255553 + Exonic hg19 Non-Cancer ERR315449 3 67 Out-of-frame Inter-chr p13.2 q13.3 131224 ChimerSeq STARFusion 1000Genome PRB3-SMR3B PRB3 chr12 11420475 - SMR3B chr4 71255564 + Exonic hg19 Non-Cancer ERR315449 3 67 Out-of-frame Inter-chr p13.2 q13.3 131225 ChimerSeq STARFusion 1000Genome PRB3-SRPK2 PRB3 chr12 11420105 - SRPK2 chr7 104946916 - Exonic hg19 Non-Cancer ERR315449 17 0 Out-of-frame Inter-chr p13.2 q22.3 CMGC:SRPK 131226 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083581 + SMR3B chr4 71255507 + Exonic hg19 Non-Cancer ERR315449 4 52 Out-of-frame Inter-chr q13.3 131227 ChimerSeq STARFusion 1000Genome HTN3-STATH HTN3 chr4 70894233 + STATH chr4 70864140 + Exonic hg19 Non-Cancer ERR315449 3 52 5'UTR-5'UTR Intra-chr 131228 ChimerSeq STARFusion 1000Genome HTN3-STATH HTN3 chr4 70924483 + STATH chr4 70868093 + Exonic hg19 Non-Cancer ERR315449 3 52 Out-of-frame Intra-chr 131229 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083470 + SMR3B chr4 71255558 + Exonic hg19 Non-Cancer ERR315449 3 43 Out-of-frame Inter-chr q13.3 131230 ChimerSeq STARFusion 1000Genome SMR3B-PRR4 SMR3B chr4 71255566 + PRR4 chr12 11035087 - Exonic hg19 Non-Cancer ERR315449 6 31 Out-of-frame Inter-chr q13.3 131231 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083416 + SMR3B chr4 71255471 + Exonic hg19 Non-Cancer ERR315449 4 35 Out-of-frame Inter-chr q13.3 131232 ChimerSeq STARFusion 1000Genome SMR3B-PRH1 SMR3B chr4 71255566 + PRH1 chr12 11035087 - Exonic hg19 Non-Cancer ERR315449 6 27 3'UTR-CDS Inter-chr q13.3 131233 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083460 + SMR3B chr4 71255548 + Exonic hg19 Non-Cancer ERR315449 3 35 Out-of-frame Inter-chr q13.3 131234 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083464 + SMR3B chr4 71255471 + Exonic hg19 Non-Cancer ERR315449 3 35 Out-of-frame Inter-chr q13.3 131235 ChimerSeq STARFusion 1000Genome PRB3-CLCN4 PRB3 chr12 11420804 - CLCN4 chrX 10204291 + Exonic hg19 Non-Cancer ERR315449 4 0 Out-of-frame Inter-chr p13.2 p22.2 131236 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315448 7 0 Out-of-frame Intra-chr p11.2 131237 ChimerSeq STARFusion 1000Genome TPH2-TRHDE TPH2 chr12 72499532 + TRHDE chr12 72680461 + Exonic hg19 Non-Cancer ERR315448 4 2 Out-of-frame Intra-chr q21.1 q21.1 131238 ChimerSeq STARFusion 1000Genome RN7SL704P-YWHAB RN7SL704P chr22 38628008 + YWHAB chr20 43536093 + Exonic hg19 Non-Cancer ERR315448 3 0 Out-of-frame Inter-chr q13.1 q13.12 131239 ChimerSeq STARFusion 1000Genome CEL-PLA2G1B CEL chr9 135944124 + PLA2G1B chr12 120762795 - Exonic hg19 Non-Cancer ERR315429 3 30 Out-of-frame Inter-chr q34.13 q24.31 131240 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315428 3 0 Out-of-frame Intra-chr p11.2 131241 ChimerSeq STARFusion 1000Genome CNR2-H3F3A CNR2 chr1 24275916 - H3F3A chr1 226252030 + Exonic hg19 Non-Cancer ERR315428 2 0 Out-of-frame Intra-chr p36.11 q42.12 Oncogene 131242 ChimerSeq STARFusion 1000Genome NDRG1-TG NDRG1 chr8 134309377 - TG chr8 134144056 + Exonic hg19 Non-Cancer ERR315428 2 0 Out-of-frame Intra-chr q24.22 Tumor suppressor gene q24.22 131243 ChimerSeq STARFusion 1000Genome SLC35G2-NCK1 SLC35G2 chr3 136538056 + NCK1 chr3 136646826 + Exonic hg19 Non-Cancer ERR315428 2 0 5'UTR-5'UTR Intra-chr q22.3 q22.3 131244 ChimerSeq STARFusion 1000Genome SMIM15-NDUFS4 SMIM15 chr5 60456915 - NDUFS4 chr5 52899282 + Exonic hg19 Non-Cancer ERR315428 2 0 Out-of-frame Intra-chr q12.1 q11.2 131245 ChimerSeq STARFusion 1000Genome XRRA1-FAM53A XRRA1 chr11 74617284 - FAM53A chr4 1619838 - Exonic hg19 Non-Cancer ERR315428 2 0 Out-of-frame Inter-chr q13.4 p16.3 131246 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315425 3 0 Out-of-frame Intra-chr p11.2 131247 ChimerSeq STARFusion 1000Genome SFSWAP-UBC SFSWAP chr12 132195992 + UBC chr12 125398320 - Exonic hg19 Non-Cancer ERR315425 3 0 CDS-5'UTR Intra-chr q24.33 q24.31 131248 ChimerSeq STARFusion 1000Genome ARF1-B2M ARF1 chr1 228270466 + B2M chr15 45007621 + Exonic hg19 Non-Cancer ERR315425 2 1 5'UTR-CDS Inter-chr q42.13 Tumor suppressor gene Oncogene 131249 ChimerSeq STARFusion 1000Genome ACSL1-HERC5 ACSL1 chr4 185698038 - HERC5 chr4 89407266 + Exonic hg19 Non-Cancer ERR315425 2 0 Out-of-frame Intra-chr q35.1 q22.1 131250 ChimerSeq STARFusion 1000Genome ADRM1-TECR ADRM1 chr20 60878105 + TECR chr19 14673337 + Exonic hg19 Non-Cancer ERR315425 2 0 5'UTR-5'UTR Inter-chr q13.33 p13.12 131251 ChimerSeq STARFusion 1000Genome ARF1-PTMA ARF1 chr1 228270466 + PTMA chr2 232576058 + Exonic hg19 Non-Cancer ERR315425 2 0 5'UTR-CDS Inter-chr q42.13 Tumor suppressor gene q37.1 131252 ChimerSeq STARFusion 1000Genome B2M-CHD2 B2M chr15 45003811 + CHD2 chr15 93428745 + Exonic hg19 Non-Cancer ERR315425 2 0 CDS-5'UTR Intra-chr Oncogene q26.1 131253 ChimerSeq STARFusion 1000Genome BACH1-MID1IP1 BACH1 chr21 30702014 + MID1IP1 chrX 38663936 + Exonic hg19 Non-Cancer ERR315425 2 0 5'UTR-5'UTR Inter-chr q21.3 Transcription factor p11.4 131254 ChimerSeq STARFusion 1000Genome BCLAF1-LGALSL BCLAF1 chr6 136610851 - LGALSL chr2 64682478 + Exonic hg19 Non-Cancer ERR315425 2 0 Out-of-frame Inter-chr q23.3 p14 131255 ChimerSeq STARFusion 1000Genome CXCR4-UBXN4 CXCR4 chr2 136875616 - UBXN4 chr2 136505837 + Exonic hg19 Non-Cancer ERR315425 2 0 Out-of-frame Intra-chr q22.1 q21.3 131256 ChimerSeq STARFusion 1000Genome DOT1L-ADORA2A DOT1L chr19 2194576 + ADORA2A chr22 24836551 + Exonic hg19 Non-Cancer ERR315425 2 0 Out-of-frame Inter-chr p13.3 Oncogene Transcription factor q11.23 131257 ChimerSeq STARFusion 1000Genome ELANE-ARID3A ELANE chr19 852395 + ARID3A chr19 960092 + Exonic hg19 Non-Cancer ERR315425 2 0 Out-of-frame Intra-chr p13.3 p13.3 Transcription factor 131258 ChimerSeq STARFusion 1000Genome GTF2H2-USP48 GTF2H2 chr5 70360952 - USP48 chr1 22079612 - Exonic hg19 Non-Cancer ERR315425 2 0 5'UTR-CDS Inter-chr p36.12 131259 ChimerSeq STARFusion 1000Genome GTPBP4-SELT GTPBP4 chr10 1053068 + SELT chr3 150344797 + Exonic hg19 Non-Cancer ERR315425 2 0 Out-of-frame Inter-chr p15.3 Tumor suppressor gene 131260 ChimerSeq STARFusion 1000Genome HSP90B1-EHMT1 HSP90B1 chr12 104340474 + EHMT1 chr9 140611078 + Exonic hg19 Non-Cancer ERR315425 2 0 Out-of-frame Inter-chr q23.3 Tumor suppressor gene q34.3 131261 ChimerSeq STARFusion 1000Genome ING5-ANKLE2 ING5 chr2 242641517 + ANKLE2 chr12 133331719 - Exonic hg19 Non-Cancer ERR315425 2 0 In-Frame Inter-chr q37.3 Tumor suppressor gene q24.33 131262 ChimerSeq STARFusion 1000Genome JHDM1D-MKRN1 JHDM1D chr7 139876544 - MKRN1 chr7 140171811 - Exonic hg19 Non-Cancer ERR315425 2 0 In-Frame Intra-chr q34 131263 ChimerSeq STARFusion 1000Genome LMTK2-CUL4A LMTK2 chr7 97788737 + CUL4A chr13 113873259 + Exonic hg19 Non-Cancer ERR315425 2 0 In-Frame Inter-chr q21.3 q34 131264 ChimerSeq STARFusion 1000Genome MBP-TUBA4A MBP chr18 74844536 - TUBA4A chr2 220116435 - Exonic hg19 Non-Cancer ERR315425 2 0 5'UTR-CDS Inter-chr q23 q35 131265 ChimerSeq STARFusion 1000Genome MED1-DDC8 MED1 chr17 37580880 - DDC8 chr17 76870001 - Exonic hg19 Non-Cancer ERR315425 2 0 Out-of-frame Intra-chr q12 Tumor suppressor gene 131266 ChimerSeq STARFusion 1000Genome MED1-TIMP2 MED1 chr17 37580880 - TIMP2 chr17 76870001 - Exonic hg19 Non-Cancer ERR315425 2 0 Out-of-frame Intra-chr q12 Tumor suppressor gene q25.3 131267 ChimerSeq STARFusion 1000Genome NAA60-DAZAP1 NAA60 chr16 3508181 + DAZAP1 chr19 1417499 + Exonic hg19 Non-Cancer ERR315425 2 0 5'UTR-CDS Inter-chr p13.3 p13.3 131268 ChimerSeq STARFusion 1000Genome NAA60-DAZAP1 NAA60 chr16 3508181 + DAZAP1 chr19 1417499 + Exonic hg19 Non-Cancer ERR315425 2 0 5'UTR-CDS Inter-chr p13.3 p13.3 131269 ChimerSeq STARFusion 1000Genome NAMPT-UBN1 NAMPT chr7 105925274 - UBN1 chr16 4902880 + Exonic hg19 Non-Cancer ERR315425 2 0 Out-of-frame Inter-chr q22.3 p13.3 131270 ChimerSeq STARFusion 1000Genome NFE2L1-DDX5 NFE2L1 chr17 46128990 + DDX5 chr17 62500960 - Exonic hg19 Non-Cancer ERR315425 2 0 Out-of-frame Intra-chr q21.32 Transcription factor q23.3 131271 ChimerSeq STARFusion 1000Genome OAZ1-KLF16 OAZ1 chr19 2269743 + KLF16 chr19 1854759 - Exonic hg19 Non-Cancer ERR315425 2 0 Out-of-frame Intra-chr p13.3 p13.3 Transcription factor 131272 ChimerSeq STARFusion 1000Genome POGZ-HDLBP POGZ chr1 151431628 - HDLBP chr2 242208710 - Exonic hg19 Non-Cancer ERR315425 2 0 Out-of-frame Inter-chr q21.3 q37.3 131273 ChimerSeq STARFusion 1000Genome PTGDS-KCTD5 PTGDS chr9 139872144 + KCTD5 chr16 2757299 + Exonic hg19 Non-Cancer ERR315425 2 0 In-Frame Inter-chr q34.3 p13.3 131274 ChimerSeq STARFusion 1000Genome RIN3-B2M RIN3 chr14 92980320 + B2M chr15 45007621 + Exonic hg19 Non-Cancer ERR315425 2 0 Out-of-frame Inter-chr q32.12 Oncogene 131275 ChimerSeq STARFusion 1000Genome SLC7A5-SNN SLC7A5 chr16 87885330 - SNN chr16 11769831 + Exonic hg19 Non-Cancer ERR315425 2 0 Out-of-frame Intra-chr q24.2 p13.13 131276 ChimerSeq STARFusion 1000Genome SPIN1-HNRNPK SPIN1 chr9 91003453 + HNRNPK chr9 86593367 - Exonic hg19 Non-Cancer ERR315425 2 0 5'UTR-5'UTR Intra-chr q22.1 q21.32 131277 ChimerSeq STARFusion 1000Genome TMEM59-BAZ2B TMEM59 chr1 54507397 - BAZ2B chr2 160189197 - Exonic hg19 Non-Cancer ERR315425 2 0 Out-of-frame Inter-chr p32.3 q24.2 Transcription factor 131278 ChimerSeq STARFusion 1000Genome UGGT2-CYBRD1 UGGT2 chr13 96648317 - CYBRD1 chr2 172398095 + Exonic hg19 Non-Cancer ERR315425 2 0 Out-of-frame Inter-chr q32.1 q31.1 131279 ChimerSeq STARFusion 1000Genome USP11-PPP2R5C USP11 chrX 47092618 + PPP2R5C chr14 102229242 + Exonic hg19 Non-Cancer ERR315425 2 0 Out-of-frame Inter-chr p11.3 q32.31 Tumor suppressor gene 131280 ChimerSeq STARFusion 1000Genome PLAUR-CREB3L2 PLAUR chr19 44169468 - CREB3L2 chr7 137600758 - Exonic hg19 Non-Cancer ERR315424 2 0 In-Frame Inter-chr q13.31 q33 Transcription factor 131281 ChimerSeq STARFusion 1000Genome RNF13-WWTR1 RNF13 chr3 149531140 + WWTR1 chr3 149290787 - Exonic hg19 Non-Cancer ERR315427 2 0 5'UTR-CDS Intra-chr q25.1 q25.1 131282 ChimerSeq STARFusion 1000Genome SERPINB1-USP25 SERPINB1 chr6 2840653 - USP25 chr21 17214717 + Exonic hg19 Non-Cancer ERR315427 2 0 Out-of-frame Inter-chr p25.2 q21.1 131283 ChimerSeq STARFusion 1000Genome IGH@-CD276 IGH@ chr14 106691671 - CD276 chr15 73991989 + Exonic hg19 Non-Cancer ERR315426 3 1 Out-of-frame Inter-chr 32.33 q24.1 131284 ChimerSeq STARFusion 1000Genome IGL@-NEIL1 IGL@ chr22 23135477 + NEIL1 chr15 75641295 + Exonic hg19 Non-Cancer ERR315426 3 0 Out-of-frame Inter-chr q11.22 q24.2 131285 ChimerSeq STARFusion 1000Genome KCNS2-IGH@ KCNS2 chr8 99444910 + IGH@ chr14 106330469 - Exonic hg19 Non-Cancer ERR315426 3 0 Out-of-frame Inter-chr q22.2 32.33 131286 ChimerSeq STARFusion 1000Genome KCNS2-IGHG1 KCNS2 chr8 99444910 + IGHG1 chr14 106330469 - Exonic hg19 Non-Cancer ERR315426 3 0 Out-of-frame Inter-chr q22.2 q32.33 131287 ChimerSeq STARFusion 1000Genome KCNS2-IGHJ4 KCNS2 chr8 99444910 + IGHJ4 chr14 106330469 - Exonic hg19 Non-Cancer ERR315426 3 0 Out-of-frame Inter-chr q22.2 131288 ChimerSeq STARFusion 1000Genome HTN3-STATH HTN3 chr4 70894233 + STATH chr4 70864142 + Exonic hg19 Non-Cancer ERR315420 33 188 5'UTR-5'UTR Intra-chr 131289 ChimerSeq STARFusion 1000Genome CST1-SMR3B CST1 chr20 23728418 - SMR3B chr4 71255728 + Exonic hg19 Non-Cancer ERR315420 19 193 Out-of-frame Inter-chr p11.21 q13.3 131290 ChimerSeq STARFusion 1000Genome HTN3-STATH HTN3 chr4 70898970 + STATH chr4 70867906 + Exonic hg19 Non-Cancer ERR315420 20 184 3'UTR-3'UTR Intra-chr 131291 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083470 + SMR3B chr4 71255558 + Exonic hg19 Non-Cancer ERR315420 22 165 Out-of-frame Inter-chr q13.3 131292 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11035142 - SMR3B chr4 71255471 + Exonic hg19 Non-Cancer ERR315420 22 137 Out-of-frame Inter-chr q13.3 131293 ChimerSeq STARFusion 1000Genome HTN3-STATH HTN3 chr4 70896471 + STATH chr4 70864169 + Exonic hg19 Non-Cancer ERR315420 5 184 Out-of-frame Intra-chr 131294 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11034980 - SMR3B chr4 71255552 + Exonic hg19 Non-Cancer ERR315420 15 135 Out-of-frame Inter-chr q13.3 131295 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083464 + SMR3B chr4 71255507 + Exonic hg19 Non-Cancer ERR315420 10 148 Out-of-frame Inter-chr q13.3 131296 ChimerSeq STARFusion 1000Genome SMR3B-STATH SMR3B chr4 71255727 + STATH chr4 70866639 + Exonic hg19 Non-Cancer ERR315420 3 175 Out-of-frame Intra-chr q13.3 131297 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11035025 - SMR3B chr4 71255558 + Exonic hg19 Non-Cancer ERR315420 21 99 Out-of-frame Inter-chr q13.3 131298 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083460 + SMR3B chr4 71255548 + Exonic hg19 Non-Cancer ERR315420 8 148 Out-of-frame Inter-chr q13.3 131299 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083563 + SMR3B chr4 71255549 + Exonic hg19 Non-Cancer ERR315420 6 148 Out-of-frame Inter-chr q13.3 131300 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083581 + SMR3B chr4 71255549 + Exonic hg19 Non-Cancer ERR315420 6 148 Out-of-frame Inter-chr q13.3 131301 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11035035 - SMR3B chr4 71255548 + Exonic hg19 Non-Cancer ERR315420 9 135 Out-of-frame Inter-chr q13.3 131302 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083515 + SMR3B chr4 71255552 + Exonic hg19 Non-Cancer ERR315420 10 129 Out-of-frame Inter-chr q13.3 131303 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11035079 - SMR3B chr4 71255471 + Exonic hg19 Non-Cancer ERR315420 12 119 Out-of-frame Inter-chr q13.3 131304 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083585 + SMR3B chr4 71255579 + Exonic hg19 Non-Cancer ERR315420 4 148 Out-of-frame Inter-chr q13.3 131305 ChimerSeq STARFusion 1000Genome HTN3-STATH HTN3 chr4 70921319 + STATH chr4 70867906 + Exonic hg19 Non-Cancer ERR315420 4 146 Out-of-frame Intra-chr 131306 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083608 + SMR3B chr4 71255603 + Exonic hg19 Non-Cancer ERR315420 3 148 Out-of-frame Inter-chr q13.3 131307 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11035142 - SMR3B chr4 71255727 + Exonic hg19 Non-Cancer ERR315420 4 135 Out-of-frame Inter-chr q13.3 131308 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083416 + SMR3B chr4 71255549 + Exonic hg19 Non-Cancer ERR315420 5 129 Out-of-frame Inter-chr q13.3 131309 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11035142 - SMR3B chr4 71255549 + Exonic hg19 Non-Cancer ERR315420 7 119 Out-of-frame Inter-chr q13.3 131310 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083408 + SMR3B chr4 71255463 + Exonic hg19 Non-Cancer ERR315420 4 129 Out-of-frame Inter-chr q13.3 131311 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083416 + SMR3B chr4 71255471 + Exonic hg19 Non-Cancer ERR315420 4 129 Out-of-frame Inter-chr q13.3 131312 ChimerSeq STARFusion 1000Genome PRH2-SMR3B PRH2 chr12 11083417 + SMR3B chr4 71255728 + Exonic hg19 Non-Cancer ERR315420 4 129 Out-of-frame Inter-chr q13.3 131313 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11035031 - SMR3B chr4 71255507 + Exonic hg19 Non-Cancer ERR315420 9 99 Out-of-frame Inter-chr q13.3 131314 ChimerSeq STARFusion 1000Genome CST1-SMR3B CST1 chr20 23728426 - SMR3B chr4 71255723 + Exonic hg19 Non-Cancer ERR315420 10 92 Out-of-frame Inter-chr p11.21 q13.3 131315 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11034932 - SMR3B chr4 71255549 + Exonic hg19 Non-Cancer ERR315420 6 99 Out-of-frame Inter-chr q13.3 131316 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11034910 - SMR3B chr4 71255579 + Exonic hg19 Non-Cancer ERR315420 5 99 Out-of-frame Inter-chr q13.3 131317 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11034914 - SMR3B chr4 71255549 + Exonic hg19 Non-Cancer ERR315420 5 99 Out-of-frame Inter-chr q13.3 131318 ChimerSeq STARFusion 1000Genome SMR3B-PRR4 SMR3B chr4 71255566 + PRR4 chr12 11035087 - Exonic hg19 Non-Cancer ERR315420 9 81 Out-of-frame Inter-chr q13.3 131319 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11035142 - SMR3B chr4 71255507 + Exonic hg19 Non-Cancer ERR315420 4 99 Out-of-frame Inter-chr q13.3 131320 ChimerSeq STARFusion 1000Genome CST1-SMR3B CST1 chr20 23666496 - SMR3B chr4 71255731 + Exonic hg19 Non-Cancer ERR315420 5 92 Out-of-frame Inter-chr p11.21 q13.3 131321 ChimerSeq STARFusion 1000Genome CST1-SMR3B CST1 chr20 23728409 - SMR3B chr4 71255560 + Exonic hg19 Non-Cancer ERR315420 5 92 Out-of-frame Inter-chr p11.21 q13.3 131322 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11034887 - SMR3B chr4 71255549 + Exonic hg19 Non-Cancer ERR315420 3 99 Out-of-frame Inter-chr q13.3 131323 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11034887 - SMR3B chr4 71255603 + Exonic hg19 Non-Cancer ERR315420 3 99 Out-of-frame Inter-chr q13.3 131324 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11034909 - SMR3B chr4 71255611 + Exonic hg19 Non-Cancer ERR315420 3 99 Out-of-frame Inter-chr q13.3 131325 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11035136 - SMR3B chr4 71232509 + Exonic hg19 Non-Cancer ERR315420 3 99 Out-of-frame Inter-chr q13.3 131326 ChimerSeq STARFusion 1000Genome PRR4-SMR3B PRR4 chr12 11035140 - SMR3B chr4 71255578 + Exonic hg19 Non-Cancer ERR315420 3 99 Out-of-frame Inter-chr q13.3 131327 ChimerSeq STARFusion 1000Genome CST1-SMR3B CST1 chr20 23728417 - SMR3B chr4 71255551 + Exonic hg19 Non-Cancer ERR315420 4 92 Out-of-frame Inter-chr p11.21 q13.3 131328 ChimerSeq STARFusion 1000Genome CST1-SMR3B CST1 chr20 23729707 - SMR3B chr4 71255622 + Exonic hg19 Non-Cancer ERR315420 4 92 Out-of-frame Inter-chr p11.21 q13.3 131329 ChimerSeq STARFusion 1000Genome SMR3B-PRH2 SMR3B chr4 71255566 + PRH2 chr12 11083408 + Exonic hg19 Non-Cancer ERR315420 9 70 Out-of-frame Inter-chr q13.3 131330 ChimerSeq STARFusion 1000Genome CST1-SMR3B CST1 chr20 23728396 - SMR3B chr4 71255589 + Exonic hg19 Non-Cancer ERR315420 3 92 Out-of-frame Inter-chr p11.21 q13.3 131331 ChimerSeq STARFusion 1000Genome SMR3B-PRR4 SMR3B chr4 71255551 + PRR4 chr12 11035174 - Exonic hg19 Non-Cancer ERR315420 3 74 Out-of-frame Inter-chr q13.3 131332 ChimerSeq STARFusion 1000Genome MUC7-PRH2 MUC7 chr4 71347209 + PRH2 chr12 11083417 + Exonic hg19 Non-Cancer ERR315420 3 25 Out-of-frame Inter-chr q13.3 131333 ChimerSeq STARFusion 1000Genome ELF2-CCNI ELF2 chr4 140098121 - CCNI chr4 77979788 - Exonic hg19 Non-Cancer ERR315420 2 0 5'UTR-CDS Intra-chr q31.1 Transcription factor q21.1 131334 ChimerSeq STARFusion 1000Genome PAN3-TXLNG2P PAN3 chr13 28771483 + TXLNG2P chrY 21751407 + Exonic hg19 Non-Cancer ERR315420 2 0 CDS-5'UTR Inter-chr q12.2 131335 ChimerSeq STARFusion 1000Genome PPP1R1A-ITGA7 PPP1R1A chr12 54982189 - ITGA7 chr12 56079072 - Exonic hg19 Non-Cancer ERR315420 2 0 In-Frame Intra-chr q13.2 q13.2 Tumor suppressor gene 131336 ChimerSeq STARFusion 1000Genome SAA1-HAT1 SAA1 chr11 18288525 + HAT1 chr2 172782047 + Exonic hg19 Non-Cancer ERR315420 2 0 In-Frame Inter-chr p15.1 Tumor suppressor gene q31.1 131337 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315423 4 0 Out-of-frame Intra-chr p11.2 131338 ChimerSeq STARFusion 1000Genome SLC28A2-SPPL2A SLC28A2 chr15 45564982 + SPPL2A chr15 51041067 - Exonic hg19 Non-Cancer ERR315423 2 0 Out-of-frame Intra-chr q21.1 q21.2 131339 ChimerSeq STARFusion 1000Genome RAG2-C11orf74 RAG2 chr11 36619652 - C11orf74 chr11 36631631 + Exonic hg19 Non-Cancer ERR315422 2 0 Out-of-frame Intra-chr p12 p12 131340 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315335 3 0 Out-of-frame Intra-chr p11.2 131341 ChimerSeq STARFusion 1000Genome DNAJC25-UGCG DNAJC25 chr9 114429226 + UGCG chr9 114676885 + Exonic hg19 Non-Cancer ERR315335 2 0 Out-of-frame Intra-chr q31.3 q31.3 131342 ChimerSeq STARFusion 1000Genome SCAP-CAMK2G SCAP chr3 47466975 - CAMK2G chr10 75620647 - Exonic hg19 Non-Cancer ERR315334 2 0 Out-of-frame Inter-chr p21.31 q22.2 131343 ChimerSeq STARFusion 1000Genome DNAJC25-UGCG DNAJC25 chr9 114429226 + UGCG chr9 114676885 + Exonic hg19 Non-Cancer ERR315337 2 2 Out-of-frame Intra-chr q31.3 q31.3 131344 ChimerSeq STARFusion 1000Genome H19-SPTAN1 H19 chr11 2017106 - SPTAN1 chr9 131339700 + Exonic hg19 Non-Cancer ERR315336 3 1 Out-of-frame Inter-chr p15.5 Tumor suppressor gene q34.11 131345 ChimerSeq STARFusion 1000Genome ACER3-POP1 ACER3 chr11 76572123 + POP1 chr8 99168278 + Exonic hg19 Non-Cancer ERR315336 2 0 Out-of-frame Inter-chr q13.5 q22.2 131346 ChimerSeq STARFusion 1000Genome CNR2-H3F3A CNR2 chr1 24275916 - H3F3A chr1 226252030 + Exonic hg19 Non-Cancer ERR315336 2 0 Out-of-frame Intra-chr p36.11 q42.12 Oncogene 131347 ChimerSeq STARFusion 1000Genome ITSN1-MIS18A ITSN1 chr21 35015019 + MIS18A chr21 33642840 - Exonic hg19 Non-Cancer ERR315336 2 0 5'UTR-CDS Intra-chr q22.11 q22.11 131348 ChimerSeq STARFusion 1000Genome MATR3-CTNNA1 MATR3 chr5 138629494 + CTNNA1 chr5 138221901 + Exonic hg19 Non-Cancer ERR315336 2 0 5'UTR-CDS Intra-chr q31.2 q31.2 Oncogene 131349 ChimerSeq STARFusion 1000Genome TGFBR2-NKIRAS1 TGFBR2 chr3 30648469 + NKIRAS1 chr3 23952941 - Exonic hg19 Non-Cancer ERR315336 2 0 CDS-5'UTR Intra-chr p24.1 Oncogene Tumor suppressor gene p24.2 131350 ChimerSeq STARFusion 1000Genome SNRPN-GORASP2 SNRPN chr15 25207356 + GORASP2 chr2 171804860 + Exonic hg19 Non-Cancer ERR315331 2 0 5'UTR-5'UTR Inter-chr q11.2 q31.1 131351 ChimerSeq STARFusion 1000Genome SNURF-GORASP2 SNURF chr15 25207356 + GORASP2 chr2 171804860 + Exonic hg19 Non-Cancer ERR315331 2 0 Out-of-frame Inter-chr q11.2 q31.1 131352 ChimerSeq STARFusion 1000Genome SNURF-GORASP2 SNURF chr15 25207356 + GORASP2 chr2 171804860 + Exonic hg19 Non-Cancer ERR315331 2 0 Out-of-frame Inter-chr q11.2 q31.1 131353 ChimerSeq STARFusion 1000Genome DDX5-LIMS2 DDX5 chr17 62502194 - LIMS2 chr2 128400647 - Exonic hg19 Non-Cancer ERR315330 2 0 In-Frame Inter-chr q23.3 q14.3 131354 ChimerSeq STARFusion 1000Genome MYH11-EIF4G2 MYH11 chr16 15813442 - EIF4G2 chr11 10824675 - Exonic hg19 Non-Cancer ERR315330 2 0 In-Frame Inter-chr Oncogene p15.4 131355 ChimerSeq STARFusion 1000Genome VPS53-CHTOP VPS53 chr17 456620 - CHTOP chr1 153614719 + Exonic hg19 Non-Cancer ERR315330 2 0 Out-of-frame Inter-chr Tumor suppressor gene q21.3 131356 ChimerSeq STARFusion 1000Genome CXCR4-PTMA CXCR4 chr2 136875616 - PTMA chr2 232576058 + Exonic hg19 Non-Cancer ERR315333 12 0 Out-of-frame Intra-chr q22.1 q37.1 131357 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315333 10 0 Out-of-frame Intra-chr p11.2 131358 ChimerSeq STARFusion 1000Genome LYZ-RN7SL2 LYZ chr12 69747360 + RN7SL2 chr14 50329529 - Exonic hg19 Non-Cancer ERR315333 4 21 Out-of-frame Inter-chr q15 q21.3 131359 ChimerSeq STARFusion 1000Genome HBB-RPL3 HBB chr11 5248198 - RPL3 chr22 39713632 - Exonic hg19 Non-Cancer ERR315333 3 6 Out-of-frame Inter-chr p15.4 q13.1 131360 ChimerSeq STARFusion 1000Genome RALY-FTH1 RALY chr20 32664859 + FTH1 chr11 61734920 - Exonic hg19 Non-Cancer ERR315333 3 1 Out-of-frame Inter-chr q11.22 q12.3 131361 ChimerSeq STARFusion 1000Genome YPEL5-PTMA YPEL5 chr2 30369928 + PTMA chr2 232576058 + Exonic hg19 Non-Cancer ERR315333 3 1 5'UTR-CDS Intra-chr p23.1 q37.1 131362 ChimerSeq STARFusion 1000Genome FP15737-LYZ FP15737 chr8 23431705 + LYZ chr12 69747553 + Exonic hg19 Non-Cancer ERR315333 3 0 Out-of-frame Inter-chr q15 131363 ChimerSeq STARFusion 1000Genome PTBP1-KLF16 PTBP1 chr19 797505 + KLF16 chr19 1854759 - Exonic hg19 Non-Cancer ERR315333 3 0 Out-of-frame Intra-chr p13.3 p13.3 Transcription factor 131364 ChimerSeq STARFusion 1000Genome SLC25A37-LYZ SLC25A37 chr8 23431705 + LYZ chr12 69747553 + Exonic hg19 Non-Cancer ERR315333 3 0 Out-of-frame Inter-chr p21.2 q15 131365 ChimerSeq STARFusion 1000Genome B2M-CXCR4 B2M chr15 45003811 + CXCR4 chr2 136873482 - Exonic hg19 Non-Cancer ERR315333 2 1 Out-of-frame Inter-chr Oncogene q22.1 131366 ChimerSeq STARFusion 1000Genome AGAP2-YPEL5 AGAP2 chr12 58135695 - YPEL5 chr2 30378716 + Exonic hg19 Non-Cancer ERR315333 2 0 Out-of-frame Inter-chr q14.1 p23.1 131367 ChimerSeq STARFusion 1000Genome BSG-RNF126 BSG chr19 572701 + RNF126 chr19 652884 - Exonic hg19 Non-Cancer ERR315333 2 0 Out-of-frame Intra-chr p13.3 p13.3 131368 ChimerSeq STARFusion 1000Genome CSDE1-TNK2 CSDE1 chr1 115300546 - TNK2 chr3 195599341 - Exonic hg19 Non-Cancer ERR315333 2 0 5'UTR-CDS Inter-chr p13.2 q29 Oncogene 131369 ChimerSeq STARFusion 1000Genome CXCR4-METRNL CXCR4 chr2 136875616 - METRNL chr17 81042814 + Exonic hg19 Non-Cancer ERR315333 2 0 Out-of-frame Inter-chr q22.1 131370 ChimerSeq STARFusion 1000Genome CYTH1-USP36 CYTH1 chr17 76778284 - USP36 chr17 76834832 - Exonic hg19 Non-Cancer ERR315333 2 0 CDS-5'UTR Intra-chr q25.3 q25.3 131371 ChimerSeq STARFusion 1000Genome DLEU2-HMGB1 DLEU2 chr13 50699438 - HMGB1 chr13 31037831 - Exonic hg19 Non-Cancer ERR315333 2 0 3'UTR-5'UTR Intra-chr q14.2 Tumor suppressor gene q12.3 131372 ChimerSeq STARFusion 1000Genome ELANE-PTBP1 ELANE chr19 852395 + PTBP1 chr19 803561 + Exonic hg19 Non-Cancer ERR315333 2 0 Out-of-frame Intra-chr p13.3 p13.3 131373 ChimerSeq STARFusion 1000Genome ITGB2-SUMO3 ITGB2 chr21 46340736 - SUMO3 chr21 46234019 - Exonic hg19 Non-Cancer ERR315333 2 0 5'UTR-CDS Intra-chr q22.3 Oncogene q22.3 131374 ChimerSeq STARFusion 1000Genome LUC7L3-USP22 LUC7L3 chr17 48797192 + USP22 chr17 20931987 - Exonic hg19 Non-Cancer ERR315333 2 0 In-Frame Intra-chr q21.33 p11.2 131375 ChimerSeq STARFusion 1000Genome MAP2K3-UBB MAP2K3 chr17 21188281 + UBB chr17 16285216 + Exonic hg19 Non-Cancer ERR315333 2 0 CDS-5'UTR Intra-chr p11.2 STE:STE7 p11.2 131376 ChimerSeq STARFusion 1000Genome MECP2-RER1 MECP2 chrX 153363061 - RER1 chr1 2327223 + Exonic hg19 Non-Cancer ERR315333 2 0 Out-of-frame Inter-chr q28 Transcription factor p36.32 131377 ChimerSeq STARFusion 1000Genome PTDSS2-FASTK PTDSS2 chr11 479152 + FASTK chr7 150775179 - Exonic hg19 Non-Cancer ERR315333 2 0 In-Frame Inter-chr q36.1 Atypical:FAST 131378 ChimerSeq STARFusion 1000Genome RASA3-B2M RASA3 chr13 114897910 - B2M chr15 45007621 + Exonic hg19 Non-Cancer ERR315333 2 0 Out-of-frame Inter-chr Oncogene 131379 ChimerSeq STARFusion 1000Genome RPAIN-EML3 RPAIN chr17 5329402 + EML3 chr11 62379068 - Exonic hg19 Non-Cancer ERR315333 2 0 Out-of-frame Inter-chr p13.2 q12.3 131380 ChimerSeq STARFusion 1000Genome RPS12-RBM39 RPS12 chr6 133136227 + RBM39 chr20 34309799 - Exonic hg19 Non-Cancer ERR315333 2 0 Out-of-frame Inter-chr q23.2 q11.22 131381 ChimerSeq STARFusion 1000Genome SH3BP2-TACC3 SH3BP2 chr4 2794865 + TACC3 chr4 1725148 + Exonic hg19 Non-Cancer ERR315333 2 0 5'UTR-5'UTR Intra-chr p16.3 p16.3 131382 ChimerSeq STARFusion 1000Genome SOX6-ANKHD1 SOX6 chr11 16403834 - ANKHD1 chr5 139844252 + Exonic hg19 Non-Cancer ERR315333 2 0 Out-of-frame Inter-chr p15.2 Transcription factor q31.3 131383 ChimerSeq STARFusion 1000Genome SZRD1-PAFAH1B2 SZRD1 chr1 16693803 + PAFAH1B2 chr11 117023157 + Exonic hg19 Non-Cancer ERR315333 2 0 Out-of-frame Inter-chr p36.13 q23.3 131384 ChimerSeq STARFusion 1000Genome TRIM4-PCNT TRIM4 chr7 99500841 - PCNT chr21 47783395 + Exonic hg19 Non-Cancer ERR315333 2 0 Out-of-frame Inter-chr q22.1 q22.3 131385 ChimerSeq STARFusion 1000Genome GOLGA8M-CHMP1A GOLGA8M chr15 28963580 - CHMP1A chr16 89713739 - Exonic hg19 Non-Cancer ERR315339 2 0 Out-of-frame Inter-chr q13.1 q24.3 131386 ChimerSeq STARFusion 1000Genome NUPL2-CHMP1A NUPL2 chr7 23226765 + CHMP1A chr16 89713739 - Exonic hg19 Non-Cancer ERR315339 2 0 In-Frame Inter-chr p15.3 q24.3 131387 ChimerSeq STARFusion 1000Genome TIPIN-TPSAB1 TIPIN chr15 66679075 - TPSAB1 chr16 1291435 + Exonic hg19 Non-Cancer ERR315470 4 0 Out-of-frame Inter-chr q22.31 p13.3 131388 ChimerSeq STARFusion 1000Genome LINC00472-BACE2 LINC00472 chr6 72126113 - BACE2 chr21 42647298 + Exonic hg19 Non-Cancer ERR315470 2 0 Out-of-frame Inter-chr q13 q22.2 131389 ChimerSeq STARFusion 1000Genome GAS6-IGHG2 GAS6 chr13 114525072 - IGHG2 chr14 106111129 - Exonic hg19 Non-Cancer ERR315471 3 0 Out-of-frame Inter-chr q34 Oncogene 131390 ChimerSeq STARFusion 1000Genome FYN-SYNE1 FYN chr6 112024088 - SYNE1 chr6 152443811 - Exonic hg19 Non-Cancer ERR315471 2 0 Out-of-frame Intra-chr q21 TK:Src q25.2 Oncogene 131391 ChimerSeq STARFusion 1000Genome SERGEF-SCAF4 SERGEF chr11 18010144 - SCAF4 chr21 33078670 - Exonic hg19 Non-Cancer ERR315471 2 0 Out-of-frame Inter-chr p15.1 q22.11 131392 ChimerSeq STARFusion 1000Genome ATP10D-USP32 ATP10D chr4 47548879 + USP32 chr17 58348842 - Exonic hg19 Non-Cancer ERR315439 2 0 Out-of-frame Inter-chr p12 q23.2 131393 ChimerSeq STARFusion 1000Genome CCT5-SOS2 CCT5 chr5 10263426 + SOS2 chr14 50625364 - Exonic hg19 Non-Cancer ERR315439 2 0 In-Frame Inter-chr p15.2 q21.3 131394 ChimerSeq STARFusion 1000Genome OR1E1-CELA3A OR1E1 chr17 3301347 - CELA3A chr1 22329499 + Exonic hg19 Non-Cancer ERR315436 4 0 Out-of-frame Inter-chr p13.3 p36.12 131395 ChimerSeq STARFusion 1000Genome STARD13-NUP98 STARD13 chr13 33859607 - NUP98 chr11 3756554 - Exonic hg19 Non-Cancer ERR315437 2 0 In-Frame Inter-chr q13.1 Tumor suppressor gene p15.4 Oncogene Tumor suppressor gene 131396 ChimerSeq STARFusion 1000Genome TTC19-EHD4 TTC19 chr17 15909882 + EHD4 chr15 42246138 - Exonic hg19 Non-Cancer ERR315437 2 0 Out-of-frame Inter-chr p12 q15.1 131397 ChimerSeq STARFusion 1000Genome HSPB1-PPP1R13B HSPB1 chr7 75933507 + PPP1R13B chr14 104208451 - Exonic hg19 Non-Cancer ERR315434 3 0 Out-of-frame Inter-chr q11.23 q32.33 131398 ChimerSeq STARFusion 1000Genome KRT13-INO80D KRT13 chr17 39658687 - INO80D chr2 206927629 - Exonic hg19 Non-Cancer ERR315434 3 0 Out-of-frame Inter-chr q21.2 131399 ChimerSeq STARFusion 1000Genome RFPL2-FOS RFPL2 chr22 32599306 - FOS chr14 75748184 + Exonic hg19 Non-Cancer ERR315434 3 0 Out-of-frame Inter-chr q12.3 q24.3 Transcription factor 131400 ChimerSeq STARFusion 1000Genome RTN4-THSD7A RTN4 chr2 55199949 - THSD7A chr7 11411389 - Exonic hg19 Non-Cancer ERR315434 3 0 Out-of-frame Inter-chr p16.1 Tumor suppressor gene p21.3 131401 ChimerSeq STARFusion 1000Genome ACACA-PRPSAP2 ACACA chr17 35766352 - PRPSAP2 chr17 18793135 + Exonic hg19 Non-Cancer ERR315434 2 0 Out-of-frame Intra-chr p11.2 131402 ChimerSeq STARFusion 1000Genome C1orf21-DDHD1 C1orf21 chr1 184356502 + DDHD1 chr14 53570574 - Exonic hg19 Non-Cancer ERR315434 2 0 5'UTR-CDS Inter-chr q25.3 q22.1 131403 ChimerSeq STARFusion 1000Genome DSE-BASP1 DSE chr6 116720829 + BASP1 chr5 17275317 + Exonic hg19 Non-Cancer ERR315434 2 0 CDS-5'UTR Inter-chr q22.1 p15.1 Tumor suppressor gene 131404 ChimerSeq STARFusion 1000Genome KLHDC10-SERPINB13 KLHDC10 chr7 129710649 + SERPINB13 chr18 61271174 + Exonic hg19 Non-Cancer ERR315434 2 0 CDS-3'UTR Inter-chr q32.2 q21.33 131405 ChimerSeq STARFusion 1000Genome PCSK5-AUH PCSK5 chr9 78722267 + AUH chr9 94060358 - Exonic hg19 Non-Cancer ERR315434 2 0 Out-of-frame Intra-chr q21.13 q22.31 131406 ChimerSeq STARFusion 1000Genome RBMX-HOTAIRM1 RBMX chrX 135957245 - HOTAIRM1 chr7 27139398 + Exonic hg19 Non-Cancer ERR315434 2 0 Out-of-frame Inter-chr q26.3 Tumor suppressor gene p15.2 131407 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315435 3 0 Out-of-frame Intra-chr p11.2 131408 ChimerSeq STARFusion 1000Genome MTUS2-NBEA MTUS2 chr13 30014186 + NBEA chr13 35770001 + Exonic hg19 Non-Cancer ERR315435 2 0 In-Frame Intra-chr q12.3 q13.3 131409 ChimerSeq STARFusion 1000Genome GATSL2-GTF2I GATSL2 chr7 74867229 - GTF2I chr7 74143124 + Exonic hg19 Non-Cancer ERR315432 4 2 Out-of-frame Intra-chr q11.23 Transcription factor 131410 ChimerSeq STARFusion 1000Genome DNAJC25-UGCG DNAJC25 chr9 114429226 + UGCG chr9 114676885 + Exonic hg19 Non-Cancer ERR315432 3 1 Out-of-frame Intra-chr q31.3 q31.3 131411 ChimerSeq STARFusion 1000Genome C5orf56-RAD50 C5orf56 chr5 131755632 + RAD50 chr5 131894976 + Exonic hg19 Non-Cancer ERR315432 2 0 5'UTR-CDS Intra-chr q31.1 q31.1 Oncogene 131412 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315433 3 0 Out-of-frame Intra-chr p11.2 131413 ChimerSeq STARFusion 1000Genome BLOC1S5-TXNDC5 BLOC1S5 chr6 8026600 - TXNDC5 chr6 7904956 - Exonic hg19 Non-Cancer ERR315433 2 0 Out-of-frame Intra-chr p24.3 p24.3 131414 ChimerSeq STARFusion 1000Genome FAM188A-COX7A2 FAM188A chr10 15889863 - COX7A2 chr6 75950981 - Exonic hg19 Non-Cancer ERR315433 2 0 In-Frame Inter-chr Tumor suppressor gene q14.1 131415 ChimerSeq STARFusion 1000Genome CTTN-KDSR CTTN chr11 70244720 + KDSR chr18 61030101 - Exonic hg19 Non-Cancer ERR315430 2 0 5'UTR-CDS Inter-chr q13.3 q21.33 131416 ChimerSeq STARFusion 1000Genome MPHOSPH8-FLNA MPHOSPH8 chr13 20224400 + FLNA chrX 153596458 - Exonic hg19 Non-Cancer ERR315430 2 0 In-Frame Inter-chr q12.11 q28 Tumor suppressor gene 131417 ChimerSeq STARFusion 1000Genome ZNF33A-CUL2 ZNF33A chr10 38306314 + CUL2 chr10 35343467 - Exonic hg19 Non-Cancer ERR315430 2 0 Out-of-frame Intra-chr p11.1 Transcription factor p11.21 Tumor suppressor gene 131418 ChimerSeq STARFusion 1000Genome TNPO3-TRIM14 TNPO3 chr7 128607334 - TRIM14 chr9 100850287 - Exonic hg19 Non-Cancer ERR315326 2 0 Out-of-frame Inter-chr q32.1 q22.33 131419 ChimerSeq STARFusion 1000Genome IGH@-SMR3B IGH@ chr14 106173695 - SMR3B chr4 71255730 + Exonic hg19 Non-Cancer ERR315325 3 112 Out-of-frame Inter-chr 32.33 q13.3 131420 ChimerSeq STARFusion 1000Genome IGHA1-SMR3B IGHA1 chr14 106173695 - SMR3B chr4 71255730 + Exonic hg19 Non-Cancer ERR315325 3 97 Out-of-frame Inter-chr q13.3 131421 ChimerSeq STARFusion 1000Genome IGH@-SMR3B IGH@ chr14 106053937 - SMR3B chr4 71255722 + Exonic hg19 Non-Cancer ERR315325 3 70 Out-of-frame Inter-chr 32.33 q13.3 131422 ChimerSeq STARFusion 1000Genome HTN3-STATH HTN3 chr4 70894233 + STATH chr4 70864142 + Exonic hg19 Non-Cancer ERR315325 3 12 5'UTR-5'UTR Intra-chr 131423 ChimerSeq STARFusion 1000Genome TMEM247-RHOQ TMEM247 chr2 46657342 + RHOQ chr2 46803226 + Exonic hg19 Non-Cancer ERR315478 2 1 Out-of-frame Intra-chr p21 p21 131424 ChimerSeq STARFusion 1000Genome DNAJC25-UGCG DNAJC25 chr9 114429226 + UGCG chr9 114676885 + Exonic hg19 Non-Cancer ERR315478 2 0 Out-of-frame Intra-chr q31.3 q31.3 131425 ChimerSeq STARFusion 1000Genome MDFIC-CHCHD3 MDFIC chr7 114619836 + CHCHD3 chr7 132660046 - Exonic hg19 Non-Cancer ERR315478 2 0 Out-of-frame Intra-chr q31.1 q33 Transcription factor 131426 ChimerSeq STARFusion 1000Genome NOTCH2-CD163 NOTCH2 chr1 120572529 - CD163 chr12 7647997 - Exonic hg19 Non-Cancer ERR315478 2 0 Out-of-frame Inter-chr p12 Oncogene Tumor suppressor gene p13.31 131427 ChimerSeq STARFusion 1000Genome NUPL2-SAT1 NUPL2 chr7 23226765 + SAT1 chrX 23802411 + Exonic hg19 Non-Cancer ERR315478 2 0 CDS-5'UTR Inter-chr p15.3 p22.11 131428 ChimerSeq STARFusion 1000Genome TMUB2-GNRH1 TMUB2 chr17 42264477 + GNRH1 chr8 25280847 - Exonic hg19 Non-Cancer ERR315478 2 0 5'UTR-5'UTR Inter-chr q21.31 p21.2 131429 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315328 4 0 Out-of-frame Intra-chr p11.2 131430 ChimerSeq STARFusion 1000Genome ANKAR-ZDHHC7 ANKAR chr2 190539556 + ZDHHC7 chr16 85015600 - Exonic hg19 Non-Cancer ERR315328 2 0 5'UTR-CDS Inter-chr q32.2 q24.1 131431 ChimerSeq STARFusion 1000Genome ERC1-ZCCHC6 ERC1 chr12 1399178 + ZCCHC6 chr9 88903659 - Exonic hg19 Non-Cancer ERR315328 2 0 Out-of-frame Inter-chr q21.33 131432 ChimerSeq STARFusion 1000Genome GTF2IRD2-ZNF611 GTF2IRD2 chr7 74234084 - ZNF611 chr19 53219166 - Exonic hg19 Non-Cancer ERR315329 2 0 CDS-5'UTR Inter-chr q11.23 Transcription factor q13.41 Transcription factor 131433 ChimerSeq STARFusion 1000Genome IL13RA1-GUF1 IL13RA1 chrX 117900939 + GUF1 chr4 44691303 + Exonic hg19 Non-Cancer ERR315329 2 0 In-Frame Inter-chr q24 p12 131434 ChimerSeq STARFusion 1000Genome PIK3R4-MBNL1 PIK3R4 chr3 130463330 - MBNL1 chr3 152132730 + Exonic hg19 Non-Cancer ERR315329 2 0 Out-of-frame Intra-chr q22.1 Other:VPS15 q25.1 131435 ChimerSeq STARFusion 1000Genome ZC4H2-IGH@ ZC4H2 chrX 64196205 - IGH@ chr14 106312010 - Exonic hg19 Non-Cancer ERR315329 2 0 Out-of-frame Inter-chr q11.2 32.33 131436 ChimerSeq STARFusion 1000Genome ZC4H2-IGHD ZC4H2 chrX 64196205 - IGHD chr14 106312010 - Exonic hg19 Non-Cancer ERR315329 2 0 Out-of-frame Inter-chr q11.2 131437 ChimerSeq STARFusion 1000Genome CPB1-CEL CPB1 chr3 148559711 + CEL chr9 135937377 + Exonic hg19 Non-Cancer ERR315479 3 161 CDS-5'UTR Inter-chr q24 q34.13 131438 ChimerSeq STARFusion 1000Genome KLK6-PRSS3P1 KLK6 chr19 51465000 - PRSS3P1 chr7 142471642 + Exonic hg19 Non-Cancer ERR315479 6 0 Out-of-frame Inter-chr q13.41 Tumor suppressor gene 131439 ChimerSeq STARFusion 1000Genome SND1-SETD7 SND1 chr7 127631109 + SETD7 chr4 140468203 - Exonic hg19 Non-Cancer ERR315479 2 0 Out-of-frame Inter-chr q32.1 q31.1 131440 ChimerSeq STARFusion 1000Genome COX6C-HMGB1 COX6C chr8 100890368 - HMGB1 chr13 31037831 - Exonic hg19 Non-Cancer ERR315402 2 0 3'UTR-5'UTR Inter-chr q22.2 q12.3 131441 ChimerSeq STARFusion 1000Genome ILDR1-RAP1B ILDR1 chr3 121740867 - RAP1B chr12 69042479 + Exonic hg19 Non-Cancer ERR315407 2 0 Out-of-frame Inter-chr q13.33 q15 131442 ChimerSeq STARFusion 1000Genome PPFIBP1-RSL1D1 PPFIBP1 chr12 27820253 + RSL1D1 chr16 11933842 - Exonic hg19 Non-Cancer ERR315407 2 0 In-Frame Inter-chr p11.23 p13.13 131443 ChimerSeq STARFusion 1000Genome ZFP41-IRF2BP2 ZFP41 chr8 144333510 + IRF2BP2 chr1 234743598 - Exonic hg19 Non-Cancer ERR315407 2 0 3'UTR-CDS Inter-chr q24.3 Transcription factor q42.3 131444 ChimerSeq STARFusion 1000Genome ZFP41-IRF2BP2 ZFP41 chr8 144333510 + IRF2BP2 chr1 234743598 - Exonic hg19 Non-Cancer ERR315407 2 0 3'UTR-CDS Inter-chr q24.3 Transcription factor q42.3 131445 ChimerSeq STARFusion 1000Genome TFG-GPR128 TFG chr3 100438902 + GPR128 chr3 100348442 + Exonic hg19 Non-Cancer ERR315406 43 22 In-Frame Intra-chr q12.2 131446 ChimerSeq STARFusion 1000Genome CXCR4-PTMA CXCR4 chr2 136875616 - PTMA chr2 232576058 + Exonic hg19 Non-Cancer ERR315406 12 0 Out-of-frame Intra-chr q22.1 q37.1 131447 ChimerSeq STARFusion 1000Genome CXCR4-PTP4A1 CXCR4 chr2 136875616 - PTP4A1 chr6 64286341 + Exonic hg19 Non-Cancer ERR315406 6 1 Out-of-frame Inter-chr q22.1 q12 131448 ChimerSeq STARFusion 1000Genome ACTB-PTMA ACTB chr7 5570155 - PTMA chr2 232576058 + Exonic hg19 Non-Cancer ERR315406 6 0 Out-of-frame Inter-chr p22.1 q37.1 131449 ChimerSeq STARFusion 1000Genome DDX5-EEF1A1 DDX5 chr17 62502194 - EEF1A1 chr6 74229779 - Exonic hg19 Non-Cancer ERR315406 4 8 CDS-5'UTR Inter-chr q23.3 q13 Tumor suppressor gene 131450 ChimerSeq STARFusion 1000Genome LINC00987-JSRP1 LINC00987 chr12 9392882 + JSRP1 chr19 2269743 - Exonic hg19 Non-Cancer ERR315406 5 0 Out-of-frame Inter-chr p13.31 p13.3 131451 ChimerSeq STARFusion 1000Genome PTP4A1-EEF1A1 PTP4A1 chr6 64282624 + EEF1A1 chr6 74229779 - Exonic hg19 Non-Cancer ERR315406 4 2 5'UTR-5'UTR Intra-chr q12 q13 Tumor suppressor gene 131452 ChimerSeq STARFusion 1000Genome GLUL-PTMA GLUL chr1 182360814 - PTMA chr2 232576058 + Exonic hg19 Non-Cancer ERR315406 4 1 Out-of-frame Inter-chr q25.3 q37.1 131453 ChimerSeq STARFusion 1000Genome HMGN2-PTMA HMGN2 chr1 26799118 + PTMA chr2 232576058 + Exonic hg19 Non-Cancer ERR315406 4 1 In-Frame Inter-chr p36.11 q37.1 131454 ChimerSeq STARFusion 1000Genome FUS-PTMA FUS chr16 31191548 + PTMA chr2 232576058 + Exonic hg19 Non-Cancer ERR315406 4 0 Out-of-frame Inter-chr p11.2 Tumor suppressor gene q37.1 131455 ChimerSeq STARFusion 1000Genome HNRNPA2B1-EEF1A1 HNRNPA2B1 chr7 26240192 - EEF1A1 chr6 74229779 - Exonic hg19 Non-Cancer ERR315406 3 2 CDS-5'UTR Inter-chr p15.2 q13 Tumor suppressor gene 131456 ChimerSeq STARFusion 1000Genome HNRNPA2B1-PTP4A1 HNRNPA2B1 chr7 26240192 - PTP4A1 chr6 64286341 + Exonic hg19 Non-Cancer ERR315406 3 1 Out-of-frame Inter-chr p15.2 q12 131457 ChimerSeq STARFusion 1000Genome BCLAF1-EEF1A1P5 BCLAF1 chr6 136610851 - EEF1A1P5 chr9 135894843 + Exonic hg19 Non-Cancer ERR315406 3 0 Out-of-frame Inter-chr q23.3 q34.13 131458 ChimerSeq STARFusion 1000Genome RRN3P2-SNX29P2 RRN3P2 chr16 29127647 + SNX29P2 chr16 29262800 + Exonic hg19 Non-Cancer ERR315406 3 0 Out-of-frame Intra-chr p11.2 p11.2 131459 ChimerSeq STARFusion 1000Genome YPEL5-PTMA YPEL5 chr2 30369928 + PTMA chr2 232576058 + Exonic hg19 Non-Cancer ERR315406 3 0 5'UTR-CDS Intra-chr p23.1 q37.1 131460 ChimerSeq STARFusion 1000Genome YWHAZ-AZIN1 YWHAZ chr8 101964157 - AZIN1 chr8 103870378 - Exonic hg19 Non-Cancer ERR315406 3 0 5'UTR-5'UTR Intra-chr q22.3 q22.3 131461 ChimerSeq STARFusion 1000Genome ZFP36-PTMAP2 ZFP36 chr19 39897568 + PTMAP2 chr5 118309536 + Exonic hg19 Non-Cancer ERR315406 3 0 Out-of-frame Inter-chr q13.2 Tumor suppressor gene q23.1 131462 ChimerSeq STARFusion 1000Genome AMD1-EEF1A1 AMD1 chr6 111196418 + EEF1A1 chr6 74229779 - Exonic hg19 Non-Cancer ERR315406 2 1 5'UTR-5'UTR Intra-chr q21 q13 Tumor suppressor gene 131463 ChimerSeq STARFusion 1000Genome DDX5-ACTB DDX5 chr17 62502194 - ACTB chr7 5569294 - Exonic hg19 Non-Cancer ERR315406 2 1 CDS-3'UTR Inter-chr q23.3 p22.1 131464 ChimerSeq STARFusion 1000Genome DDX5-PTMA DDX5 chr17 62502194 - PTMA chr2 232576058 + Exonic hg19 Non-Cancer ERR315406 2 1 Out-of-frame Inter-chr q23.3 q37.1 131465 ChimerSeq STARFusion 1000Genome DDX5-PTP4A1 DDX5 chr17 62502194 - PTP4A1 chr6 64286341 + Exonic hg19 Non-Cancer ERR315406 2 1 Out-of-frame Inter-chr q23.3 q12 131466 ChimerSeq STARFusion 1000Genome FUS-EEF1A1 FUS chr16 31191548 + EEF1A1 chr6 74229779 - Exonic hg19 Non-Cancer ERR315406 2 1 5'UTR-5'UTR Inter-chr p11.2 Tumor suppressor gene q13 Tumor suppressor gene 131467 ChimerSeq STARFusion 1000Genome HNRNPA2B1-CALM1 HNRNPA2B1 chr7 26240192 - CALM1 chr14 90866409 + Exonic hg19 Non-Cancer ERR315406 2 1 Out-of-frame Inter-chr p15.2 q32.11 131468 ChimerSeq STARFusion 1000Genome SRSF5-EEF1A1 SRSF5 chr14 70233972 + EEF1A1 chr6 74229779 - Exonic hg19 Non-Cancer ERR315406 2 1 5'UTR-5'UTR Inter-chr q24.1 q13 Tumor suppressor gene 131469 ChimerSeq STARFusion 1000Genome UVSSA-MAEA UVSSA chr4 1349033 + MAEA chr4 1305767 + Exonic hg19 Non-Cancer ERR315406 2 1 In-Frame Intra-chr p16.3 p16.3 131470 ChimerSeq STARFusion 1000Genome YWHAE-CRK YWHAE chr17 1303341 - CRK chr17 1340449 - Exonic hg19 Non-Cancer ERR315406 2 1 In-Frame Intra-chr p13.3 p13.3 131471 ChimerSeq STARFusion 1000Genome ATP6C-UBTF ATP6C chr16 2564183 + UBTF chr17 42295664 - Exonic hg19 Non-Cancer ERR315406 2 0 Out-of-frame Inter-chr q21.31 131472 ChimerSeq STARFusion 1000Genome ATP6V0C-UBTF ATP6V0C chr16 2564183 + UBTF chr17 42295664 - Exonic hg19 Non-Cancer ERR315406 2 0 CDS-5'UTR Inter-chr p13.3 q21.31 131473 ChimerSeq STARFusion 1000Genome B3GNT5-TIPARP B3GNT5 chr3 182971260 + TIPARP chr3 156395446 + Exonic hg19 Non-Cancer ERR315406 2 0 5'UTR-5'UTR Intra-chr q27.1 q25.31 131474 ChimerSeq STARFusion 1000Genome BASP1-CCNG2 BASP1 chr5 17217919 + CCNG2 chr4 78079686 + Exonic hg19 Non-Cancer ERR315406 2 0 5'UTR-CDS Inter-chr p15.1 Tumor suppressor gene q21.1 131475 ChimerSeq STARFusion 1000Genome C22orf34-BRD1 C22orf34 chr22 50051053 - BRD1 chr22 50217979 - Exonic hg19 Non-Cancer ERR315406 2 0 Out-of-frame Intra-chr q13.33 q13.33 131476 ChimerSeq STARFusion 1000Genome CIRBP-RNF166 CIRBP chr19 1269409 + RNF166 chr16 88767826 - Exonic hg19 Non-Cancer ERR315406 2 0 5'UTR-5'UTR Inter-chr p13.3 q24.3 131477 ChimerSeq STARFusion 1000Genome FUS-ACTB FUS chr16 31191548 + ACTB chr7 5569294 - Exonic hg19 Non-Cancer ERR315406 2 0 CDS-3'UTR Inter-chr p11.2 Tumor suppressor gene p22.1 131478 ChimerSeq STARFusion 1000Genome HIAT1-ACTB HIAT1 chr1 100503872 + ACTB chr7 5569294 - Exonic hg19 Non-Cancer ERR315406 2 0 CDS-3'UTR Inter-chr p22.1 131479 ChimerSeq STARFusion 1000Genome MAEA-CTBP1 MAEA chr4 1283770 + CTBP1 chr4 1222131 - Exonic hg19 Non-Cancer ERR315406 2 0 In-Frame Intra-chr p16.3 p16.3 131480 ChimerSeq STARFusion 1000Genome MATR3-ZBTB18 MATR3 chr5 138629461 + ZBTB18 chr1 244217090 + Exonic hg19 Non-Cancer ERR315406 2 0 Out-of-frame Inter-chr q31.2 q44 Tumor suppressor gene Transcription factor 131481 ChimerSeq STARFusion 1000Genome NSD1-CREBRF NSD1 chr5 176563031 + CREBRF chr5 172507588 + Exonic hg19 Non-Cancer ERR315406 2 0 CDS-5'UTR Intra-chr q35.3 Oncogene q35.1 131482 ChimerSeq STARFusion 1000Genome PANK3-C1QTNF3 PANK3 chr5 168006261 - C1QTNF3 chr5 34035863 - Exonic hg19 Non-Cancer ERR315406 2 0 Out-of-frame Intra-chr q34 p13.2 131483 ChimerSeq STARFusion 1000Genome RAP2C-CLIC2 RAP2C chrX 131348162 - CLIC2 chrX 154528458 - Exonic hg19 Non-Cancer ERR315406 2 0 3'UTR-CDS Intra-chr q26.2 q28 131484 ChimerSeq STARFusion 1000Genome RBM38-BCL7A RBM38 chr20 55967833 + BCL7A chr12 122468606 + Exonic hg19 Non-Cancer ERR315406 2 0 Out-of-frame Inter-chr q13.31 Tumor suppressor gene 131485 ChimerSeq STARFusion 1000Genome RHOF-PTP4A1 RHOF chr12 122239613 - PTP4A1 chr6 64286341 + Exonic hg19 Non-Cancer ERR315406 2 0 Out-of-frame Inter-chr q24.31 q12 131486 ChimerSeq STARFusion 1000Genome SRGN-IER3 SRGN chr10 70847992 + IER3 chr6 30711973 - Exonic hg19 Non-Cancer ERR315406 2 0 5'UTR-5'UTR Inter-chr q22.1 Tumor suppressor gene 131487 ChimerSeq STARFusion 1000Genome SRSF5-PTP4A1 SRSF5 chr14 70233972 + PTP4A1 chr6 64286341 + Exonic hg19 Non-Cancer ERR315406 2 0 Out-of-frame Inter-chr q24.1 q12 131488 ChimerSeq STARFusion 1000Genome SS18L1-OSBPL2 SS18L1 chr20 60718945 + OSBPL2 chr20 60831113 + Exonic hg19 Non-Cancer ERR315406 2 0 CDS-5'UTR Intra-chr q13.33 q13.33 131489 ChimerSeq STARFusion 1000Genome ST3GAL1-NDRG1 ST3GAL1 chr8 134583936 - NDRG1 chr8 134296572 - Exonic hg19 Non-Cancer ERR315406 2 0 5'UTR-5'UTR Intra-chr q24.22 q24.22 Tumor suppressor gene 131490 ChimerSeq STARFusion 1000Genome THEMIS2-RAB35 THEMIS2 chr1 28199176 + RAB35 chr12 120546271 - Exonic hg19 Non-Cancer ERR315406 2 0 Out-of-frame Inter-chr p35.3 q24.23 131491 ChimerSeq STARFusion 1000Genome TMEM11-USP22 TMEM11 chr17 21117404 - USP22 chr17 20931987 - Exonic hg19 Non-Cancer ERR315406 2 0 Out-of-frame Intra-chr p11.2 p11.2 131492 ChimerSeq STARFusion 1000Genome UBE2E1-SEC22C UBE2E1 chr3 23853001 + SEC22C chr3 42610565 - Exonic hg19 Non-Cancer ERR315406 2 0 CDS-5'UTR Intra-chr p24.2 p22.1 131493 ChimerSeq STARFusion 1000Genome YPEL5-ZBTB18 YPEL5 chr2 30369928 + ZBTB18 chr1 244217090 + Exonic hg19 Non-Cancer ERR315406 2 0 Out-of-frame Inter-chr p23.1 q44 Tumor suppressor gene Transcription factor 131494 ChimerSeq STARFusion 1000Genome YWHAZ-AZIN1 YWHAZ chr8 101965497 - AZIN1 chr8 103870378 - Exonic hg19 Non-Cancer ERR315406 2 0 5'UTR-5'UTR Intra-chr q22.3 q22.3 131495 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315405 2 0 Out-of-frame Intra-chr p11.2 131496 ChimerSeq STARFusion 1000Genome TFG-GPR128 TFG chr3 100438902 + GPR128 chr3 100348442 + Exonic hg19 Non-Cancer ERR315404 39 17 In-Frame Intra-chr q12.2 131497 ChimerSeq STARFusion 1000Genome HNRNPH1-EEF1A1 HNRNPH1 chr5 179050596 - EEF1A1 chr6 74229779 - Exonic hg19 Non-Cancer ERR315404 8 0 5'UTR-5'UTR Inter-chr q35.3 q13 Tumor suppressor gene 131498 ChimerSeq STARFusion 1000Genome DDX5-EEF1A1 DDX5 chr17 62502194 - EEF1A1 chr6 74229779 - Exonic hg19 Non-Cancer ERR315404 4 2 CDS-5'UTR Inter-chr q23.3 q13 Tumor suppressor gene 131499 ChimerSeq STARFusion 1000Genome HNRNPA2B1-EEF1A1 HNRNPA2B1 chr7 26240192 - EEF1A1 chr6 74229779 - Exonic hg19 Non-Cancer ERR315404 3 6 CDS-5'UTR Inter-chr p15.2 q13 Tumor suppressor gene 131500 ChimerSeq STARFusion 1000Genome SS18L1-PSMA7 SS18L1 chr20 60718945 + PSMA7 chr20 60716000 - Exonic hg19 Non-Cancer ERR315404 4 0 In-Frame Intra-chr q13.33 q13.33 131501 ChimerSeq STARFusion 1000Genome SYNCRIP-EEF1A1 SYNCRIP chr6 86352515 - EEF1A1 chr6 74229779 - Exonic hg19 Non-Cancer ERR315404 3 1 5'UTR-5'UTR Intra-chr q14.3 q13 Tumor suppressor gene 131502 ChimerSeq STARFusion 1000Genome DDX5-HMGB1 DDX5 chr17 62502194 - HMGB1 chr13 31037831 - Exonic hg19 Non-Cancer ERR315404 3 0 CDS-5'UTR Inter-chr q23.3 q12.3 131503 ChimerSeq STARFusion 1000Genome OAZ1-HMGB1 OAZ1 chr19 2269743 + HMGB1 chr13 31037831 - Exonic hg19 Non-Cancer ERR315404 3 0 CDS-5'UTR Inter-chr p13.3 q12.3 131504 ChimerSeq STARFusion 1000Genome SRSF5-EEF1A1 SRSF5 chr14 70233972 + EEF1A1 chr6 74229779 - Exonic hg19 Non-Cancer ERR315404 2 4 5'UTR-5'UTR Inter-chr q24.1 q13 Tumor suppressor gene 131505 ChimerSeq STARFusion 1000Genome YPEL5-FOSL2 YPEL5 chr2 30369928 + FOSL2 chr2 28626974 + Exonic hg19 Non-Cancer ERR315404 3 0 5'UTR-CDS Intra-chr p23.1 p23.2 Transcription factor 131506 ChimerSeq STARFusion 1000Genome DDX5-ATP6V0C DDX5 chr17 62502194 - ATP6V0C chr16 2569219 + Exonic hg19 Non-Cancer ERR315404 2 1 Out-of-frame Inter-chr q23.3 p13.3 131507 ChimerSeq STARFusion 1000Genome DDX5-BMI1 DDX5 chr17 62502194 - BMI1 chr10 22615360 + Exonic hg19 Non-Cancer ERR315404 2 1 Out-of-frame Inter-chr q23.3 p12.2 131508 ChimerSeq STARFusion 1000Genome HIST1H2BD-ARRDC3 HIST1H2BD chr6 26158787 + ARRDC3 chr5 90674592 - Exonic hg19 Non-Cancer ERR315404 2 1 3'UTR-CDS Inter-chr p22.2 q14.3 131509 ChimerSeq STARFusion 1000Genome LRCH4-CCNG2 LRCH4 chr7 100173328 - CCNG2 chr4 78079686 + Exonic hg19 Non-Cancer ERR315404 2 1 Out-of-frame Inter-chr q22.1 q21.1 131510 ChimerSeq STARFusion 1000Genome PLEK-IER3 PLEK chr2 68592525 + IER3 chr6 30711973 - Exonic hg19 Non-Cancer ERR315404 2 1 CDS-5'UTR Inter-chr p14 Tumor suppressor gene 131511 ChimerSeq STARFusion 1000Genome CFL1-HMGB1 CFL1 chr11 65625568 - HMGB1 chr13 31037831 - Exonic hg19 Non-Cancer ERR315404 2 0 CDS-5'UTR Inter-chr q13.1 q12.3 131512 ChimerSeq STARFusion 1000Genome CFL1-SF1 CFL1 chr11 65625568 - SF1 chr11 64544098 - Exonic hg19 Non-Cancer ERR315404 2 0 Out-of-frame Intra-chr q13.1 q13.1 131513 ChimerSeq STARFusion 1000Genome DDX5-FAM188A DDX5 chr17 62502194 - FAM188A chr10 15838171 - Exonic hg19 Non-Cancer ERR315404 2 0 Out-of-frame Inter-chr q23.3 Tumor suppressor gene 131514 ChimerSeq STARFusion 1000Genome ESCO1-DSCR3 ESCO1 chr18 19180584 - DSCR3 chr21 38612940 - Exonic hg19 Non-Cancer ERR315404 2 0 5'UTR-CDS Inter-chr q11.2 q22.13 131515 ChimerSeq STARFusion 1000Genome FRMD4B-PRPF6 FRMD4B chr3 69242799 - PRPF6 chr20 62654110 + Exonic hg19 Non-Cancer ERR315404 2 0 Out-of-frame Inter-chr p14.1 q13.33 131516 ChimerSeq STARFusion 1000Genome GALNS-RNF166 GALNS chr16 88923166 - RNF166 chr16 88767826 - Exonic hg19 Non-Cancer ERR315404 2 0 Out-of-frame Intra-chr q24.3 q24.3 131517 ChimerSeq STARFusion 1000Genome HIST1H2BD-IST1 HIST1H2BD chr6 26158787 + IST1 chr16 71956377 + Exonic hg19 Non-Cancer ERR315404 2 0 3'UTR-3'UTR Inter-chr p22.2 q22.2 131518 ChimerSeq STARFusion 1000Genome HMGN2-NECAB3 HMGN2 chr1 26799118 + NECAB3 chr20 32248201 - Exonic hg19 Non-Cancer ERR315404 2 0 In-Frame Inter-chr p36.11 q11.22 131519 ChimerSeq STARFusion 1000Genome HNRNPH1-HMGB1 HNRNPH1 chr5 179050596 - HMGB1 chr13 31037831 - Exonic hg19 Non-Cancer ERR315404 2 0 5'UTR-5'UTR Inter-chr q35.3 q12.3 131520 ChimerSeq STARFusion 1000Genome HNRNPH1-MAFK HNRNPH1 chr5 179050596 - MAFK chr7 1578785 + Exonic hg19 Non-Cancer ERR315404 2 0 Out-of-frame Inter-chr q35.3 p22.3 Transcription factor 131521 ChimerSeq STARFusion 1000Genome IGH@-HMGB1 IGH@ chr14 106330425 - HMGB1 chr13 31037831 - Exonic hg19 Non-Cancer ERR315404 2 0 Out-of-frame Inter-chr 32.33 q12.3 131522 ChimerSeq STARFusion 1000Genome IGHJ4-HMGB1 IGHJ4 chr14 106330425 - HMGB1 chr13 31037831 - Exonic hg19 Non-Cancer ERR315404 2 0 Out-of-frame Inter-chr q12.3 131523 ChimerSeq STARFusion 1000Genome IL8-RCSD1 IL8 chr4 74606439 + RCSD1 chr1 167673901 + Exonic hg19 Non-Cancer ERR315404 2 0 Out-of-frame Inter-chr q24.2 131524 ChimerSeq STARFusion 1000Genome INPP5A-CCNG2 INPP5A chr10 134563349 + CCNG2 chr4 78079686 + Exonic hg19 Non-Cancer ERR315404 2 0 In-Frame Inter-chr q26.3 q21.1 131525 ChimerSeq STARFusion 1000Genome ITGB2-SUMO3 ITGB2 chr21 46340736 - SUMO3 chr21 46234019 - Exonic hg19 Non-Cancer ERR315404 2 0 5'UTR-CDS Intra-chr q22.3 Oncogene q22.3 131526 ChimerSeq STARFusion 1000Genome MDM4-TBCEL MDM4 chr1 204495562 + TBCEL chr11 120916383 + Exonic hg19 Non-Cancer ERR315404 2 0 5'UTR-5'UTR Inter-chr q32.1 Oncogene q23.3 131527 ChimerSeq STARFusion 1000Genome MXD4-HMGB1 MXD4 chr4 2254135 - HMGB1 chr13 31037831 - Exonic hg19 Non-Cancer ERR315404 2 0 CDS-5'UTR Inter-chr p16.3 Transcription factor q12.3 131528 ChimerSeq STARFusion 1000Genome OAZ1-MKNK2 OAZ1 chr19 2269743 + MKNK2 chr19 2043581 - Exonic hg19 Non-Cancer ERR315404 2 0 Out-of-frame Intra-chr p13.3 p13.3 131529 ChimerSeq STARFusion 1000Genome OAZ1-SF1 OAZ1 chr19 2269743 + SF1 chr11 64544098 - Exonic hg19 Non-Cancer ERR315404 2 0 Out-of-frame Inter-chr p13.3 q13.1 131530 ChimerSeq STARFusion 1000Genome PIK3R5-EIF5A PIK3R5 chr17 8868913 - EIF5A chr17 7212934 + Exonic hg19 Non-Cancer ERR315404 2 0 Out-of-frame Intra-chr p13.1 p13.1 131531 ChimerSeq STARFusion 1000Genome SLC38A2-RERE SLC38A2 chr12 46766292 - RERE chr1 8482867 - Exonic hg19 Non-Cancer ERR315404 2 0 5'UTR-5'UTR Inter-chr q13.11 p36.23 131532 ChimerSeq STARFusion 1000Genome YIPF6-BAZ1B YIPF6 chrX 67730618 + BAZ1B chr7 72922801 - Exonic hg19 Non-Cancer ERR315404 2 0 Out-of-frame Inter-chr q12 q11.23 131533 ChimerSeq STARFusion 1000Genome YPEL5-SRSF7 YPEL5 chr2 30369928 + SRSF7 chr2 38977336 - Exonic hg19 Non-Cancer ERR315404 2 0 5'UTR-CDS Intra-chr p23.1 p22.1 131534 ChimerSeq STARFusion 1000Genome YWHAZ-AZIN1 YWHAZ chr8 101965497 - AZIN1 chr8 103870378 - Exonic hg19 Non-Cancer ERR315404 2 0 5'UTR-5'UTR Intra-chr q22.3 q22.3 131535 ChimerSeq STARFusion 1000Genome ACSL5-PSMB5 ACSL5 chr10 114173065 + PSMB5 chr14 23502883 - Exonic hg19 Non-Cancer ERR315409 2 0 In-Frame Inter-chr q25.2 q11.2 131536 ChimerSeq STARFusion 1000Genome BTNL8-SPG7 BTNL8 chr5 180326359 + SPG7 chr16 89611056 + Exonic hg19 Non-Cancer ERR315409 2 0 In-Frame Inter-chr q35.3 q24.3 131537 ChimerSeq STARFusion 1000Genome GULP1-SCN9A GULP1 chr2 189248616 + SCN9A chr2 167108395 - Exonic hg19 Non-Cancer ERR315409 2 0 5'UTR-CDS Intra-chr q32.1 q24.3 131538 ChimerSeq STARFusion 1000Genome PTBP2-PRKACB PTBP2 chr1 97217056 + PRKACB chr1 84644860 + Exonic hg19 Non-Cancer ERR315409 2 0 In-Frame Intra-chr p21.3 p31.1 131539 ChimerSeq STARFusion 1000Genome OGDH-CPSF6 OGDH chr7 44664164 + CPSF6 chr12 69663292 + Exonic hg19 Non-Cancer ERR315408 2 0 CDS-3'UTR Inter-chr p13 q15 131540 ChimerSeq STARFusion 1000Genome KRT13-INO80D KRT13 chr17 39658687 - INO80D chr2 206927629 - Exonic hg19 Non-Cancer ERR315489 5 0 Out-of-frame Inter-chr q21.2 131541 ChimerSeq STARFusion 1000Genome RFPL2-FOS RFPL2 chr22 32599306 - FOS chr14 75748184 + Exonic hg19 Non-Cancer ERR315489 4 0 Out-of-frame Inter-chr q12.3 q24.3 Transcription factor 131542 ChimerSeq STARFusion 1000Genome DDX3X-KRT13 DDX3X chrX 41206907 + KRT13 chr17 39661625 - Exonic hg19 Non-Cancer ERR315489 3 1 Out-of-frame Inter-chr p11.4 Tumor suppressor gene q21.2 131543 ChimerSeq STARFusion 1000Genome C5orf56-RAD50 C5orf56 chr5 131785381 + RAD50 chr5 131894976 + Exonic hg19 Non-Cancer ERR315489 2 0 5'UTR-CDS Intra-chr q31.1 q31.1 Oncogene 131544 ChimerSeq STARFusion 1000Genome YWHAZ-ZNF316 YWHAZ chr8 101931672 - ZNF316 chr7 6684155 + Exonic hg19 Non-Cancer ERR315488 3 0 Out-of-frame Inter-chr q22.3 p22.1 Transcription factor 131545 ChimerSeq STARFusion 1000Genome ARHGAP15-RALB ARHGAP15 chr2 144008169 + RALB chr2 121050717 + Exonic hg19 Non-Cancer ERR315488 2 0 In-Frame Intra-chr q22.2 q14.2 131546 ChimerSeq STARFusion 1000Genome HSP90B1-IRF8 HSP90B1 chr12 104326196 + IRF8 chr16 85953715 + Exonic hg19 Non-Cancer ERR315488 2 0 Out-of-frame Inter-chr q23.3 Tumor suppressor gene q24.1 Tumor suppressor gene Transcription factor 131547 ChimerSeq STARFusion 1000Genome PAPD4-NUP214 PAPD4 chr5 78952824 + NUP214 chr9 134090599 + Exonic hg19 Non-Cancer ERR315488 2 0 In-Frame Inter-chr q14.1 q34.13 Oncogene 131548 ChimerSeq STARFusion 1000Genome RNH1-TP53BP1 RNH1 chr11 506609 - TP53BP1 chr15 43708614 - Exonic hg19 Non-Cancer ERR315488 2 0 5'UTR-CDS Inter-chr Tumor suppressor gene q15.3 Tumor suppressor gene 131549 ChimerSeq STARFusion 1000Genome SLC36A1-IFNGR1 SLC36A1 chr5 150859050 + IFNGR1 chr6 137528214 - Exonic hg19 Non-Cancer ERR315488 2 0 In-Frame Inter-chr q33.1 q23.3 131550 ChimerSeq STARFusion 1000Genome LYST-SETX LYST chr1 235993526 - SETX chr9 135140372 - Exonic hg19 Non-Cancer ERR315483 2 0 In-Frame Inter-chr q42.3 q34.13 131551 ChimerSeq STARFusion 1000Genome RECQL5-RNPC3 RECQL5 chr17 73662981 - RNPC3 chr1 104097656 + Exonic hg19 Non-Cancer ERR315483 2 0 Out-of-frame Inter-chr q25.1 p21.1 131552 ChimerSeq STARFusion 1000Genome RIPK4-KANSL3 RIPK4 chr21 43171257 - KANSL3 chr2 97285499 - Exonic hg19 Non-Cancer ERR315483 2 0 In-Frame Inter-chr q22.3 q11.2 131553 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315482 5 0 Out-of-frame Intra-chr p11.2 131554 ChimerSeq STARFusion 1000Genome MCC-PPAP2A MCC chr5 112630026 - PPAP2A chr5 54763977 - Exonic hg19 Non-Cancer ERR315482 2 0 In-Frame Intra-chr q22.2 Tumor suppressor gene 131555 ChimerSeq STARFusion 1000Genome MBTD1-CLTC MBTD1 chr17 49281152 - CLTC chr17 57752062 + Exonic hg19 Non-Cancer ERR315481 2 0 Out-of-frame Intra-chr q21.33 q23.1 131556 ChimerSeq STARFusion 1000Genome ALG14-CNN3 ALG14 chr1 95492685 - CNN3 chr1 95369080 - Exonic hg19 Non-Cancer ERR315480 2 0 In-Frame Intra-chr p21.3 p21.3 131557 ChimerSeq STARFusion 1000Genome FAM69A-ABCD3 FAM69A chr1 93426933 - ABCD3 chr1 94924163 + Exonic hg19 Non-Cancer ERR315480 2 0 Out-of-frame Intra-chr p22.1 p21.3 131558 ChimerSeq STARFusion 1000Genome OXR1-RAD21 OXR1 chr8 107726213 + RAD21 chr8 117879000 - Exonic hg19 Non-Cancer ERR315480 2 0 CDS-5'UTR Intra-chr q23.1 q24.11 131559 ChimerSeq STARFusion 1000Genome MYH9-SFTPC MYH9 chr22 36689426 - SFTPC chr8 22019317 + Exonic hg19 Non-Cancer ERR315487 4 3 Out-of-frame Inter-chr q12.3 Oncogene Tumor suppressor gene p21.3 131560 ChimerSeq STARFusion 1000Genome SENP2-IFIT3 SENP2 chr3 185316286 + IFIT3 chr10 91100435 + Exonic hg19 Non-Cancer ERR315487 3 0 Out-of-frame Inter-chr q27.2 q23.31 131561 ChimerSeq STARFusion 1000Genome SFTPA2-MSN SFTPA2 chr10 81316121 - MSN chrX 64959767 + Exonic hg19 Non-Cancer ERR315487 3 0 Out-of-frame Inter-chr q22.3 q12 131562 ChimerSeq STARFusion 1000Genome SNHG7-IGKC SNHG7 chr9 139620776 - IGKC chr2 89156881 - Exonic hg19 Non-Cancer ERR315487 3 0 Out-of-frame Inter-chr q34.3 p11.2 131563 ChimerSeq STARFusion 1000Genome TBX21-TMOD3 TBX21 chr17 45822194 + TMOD3 chr15 52203136 + Exonic hg19 Non-Cancer ERR315487 3 0 Out-of-frame Inter-chr q21.32 Transcription factor q21.2 131564 ChimerSeq STARFusion 1000Genome ZC3H18-ZFPM1 ZC3H18 chr16 88653092 + ZFPM1 chr16 88552347 + Exonic hg19 Non-Cancer ERR315487 2 2 In-Frame Intra-chr q24.2 q24.2 Transcription factor 131565 ChimerSeq STARFusion 1000Genome CFLAR-AGFG1 CFLAR chr2 201994869 + AGFG1 chr2 228418420 + Exonic hg19 Non-Cancer ERR315487 2 0 Out-of-frame Intra-chr q33.1 q36.3 131566 ChimerSeq STARFusion 1000Genome JRKL-CCDC82 JRKL chr11 96123237 + CCDC82 chr11 96116637 - Exonic hg19 Non-Cancer ERR315487 2 0 5'UTR-CDS Intra-chr q21 Transcription factor q21 131567 ChimerSeq STARFusion 1000Genome KMT2E-SRSF7 KMT2E chr7 104704027 + SRSF7 chr2 38975795 - Exonic hg19 Non-Cancer ERR315487 2 0 Out-of-frame Inter-chr q22.3 p22.1 131568 ChimerSeq STARFusion 1000Genome LARP1B-THAP9 LARP1B chr4 129043343 + THAP9 chr4 83838097 + Exonic hg19 Non-Cancer ERR315487 2 0 Out-of-frame Intra-chr q28.2 q21.22 Transcription factor 131569 ChimerSeq STARFusion 1000Genome MRC1-PICALM MRC1 chr10 18145281 + PICALM chr11 85670103 - Exonic hg19 Non-Cancer ERR315487 2 0 3'UTR-CDS Inter-chr p12.33 q14.2 131570 ChimerSeq STARFusion 1000Genome NUPR1L-PSPH NUPR1L chr7 56183708 - PSPH chr7 56088924 - Exonic hg19 Non-Cancer ERR315487 2 0 Out-of-frame Intra-chr p11.2 131571 ChimerSeq STARFusion 1000Genome PLS3-PTPLA PLS3 chrX 114856721 + PTPLA chr10 17641410 - Exonic hg19 Non-Cancer ERR315487 2 0 In-Frame Inter-chr q23 131572 ChimerSeq STARFusion 1000Genome SLC11A1-TMUB2 SLC11A1 chr2 219252678 + TMUB2 chr17 42268474 + Exonic hg19 Non-Cancer ERR315487 2 0 CDS-3'UTR Inter-chr q35 q21.31 131573 ChimerSeq STARFusion 1000Genome SP100-ARID1B SP100 chr2 231375881 + ARID1B chr6 157405796 + Exonic hg19 Non-Cancer ERR315487 2 0 In-Frame Inter-chr q37.1 Tumor suppressor gene Transcription factor q25.3 Oncogene 131574 ChimerSeq STARFusion 1000Genome WHSC1-EBPL WHSC1 chr4 1941505 + EBPL chr13 50235344 - Exonic hg19 Non-Cancer ERR315487 2 0 Out-of-frame Inter-chr Oncogene q14.2 131575 ChimerSeq STARFusion 1000Genome E2F4-RPL14 E2F4 chr16 67229785 + RPL14 chr3 40503545 + Exonic hg19 Non-Cancer ERR315486 3 2 Out-of-frame Inter-chr q22.1 Transcription factor p22.1 131576 ChimerSeq STARFusion 1000Genome ACTB-MDK ACTB chr7 5570155 - MDK chr11 46403607 + Exonic hg19 Non-Cancer ERR315486 3 0 Out-of-frame Inter-chr p22.1 p11.2 131577 ChimerSeq STARFusion 1000Genome BSG-ZBTB7A BSG chr19 572701 + ZBTB7A chr19 4055245 - Exonic hg19 Non-Cancer ERR315486 3 0 CDS-5'UTR Intra-chr p13.3 p13.3 Transcription factor 131578 ChimerSeq STARFusion 1000Genome HBD-RPS7 HBD chr11 5255599 - RPS7 chr2 3624082 + Exonic hg19 Non-Cancer ERR315486 3 0 Out-of-frame Inter-chr p15.4 p25.3 131579 ChimerSeq STARFusion 1000Genome HBP1-PTMA HBP1 chr7 106809630 + PTMA chr2 232576058 + Exonic hg19 Non-Cancer ERR315486 3 0 5'UTR-CDS Inter-chr Tumor suppressor gene Transcription factor q37.1 131580 ChimerSeq STARFusion 1000Genome PIM3-TRABD PIM3 chr22 50355459 + TRABD chr22 50635670 + Exonic hg19 Non-Cancer ERR315486 3 0 Out-of-frame Intra-chr q13.33 CAMK:PIM q13.33 131581 ChimerSeq STARFusion 1000Genome BSDC1-HDAC1 BSDC1 chr1 32834048 - HDAC1 chr1 32798618 + Exonic hg19 Non-Cancer ERR315486 2 0 Out-of-frame Intra-chr p35.1 p35.2 Tumor suppressor gene 131582 ChimerSeq STARFusion 1000Genome BSG-RNF126 BSG chr19 572701 + RNF126 chr19 650296 - Exonic hg19 Non-Cancer ERR315486 2 0 Out-of-frame Intra-chr p13.3 p13.3 131583 ChimerSeq STARFusion 1000Genome CXCR4-RARA CXCR4 chr2 136875616 - RARA chr17 38504568 + Exonic hg19 Non-Cancer ERR315486 2 0 Out-of-frame Inter-chr q22.1 q21.2 Oncogene Transcription factor 131584 ChimerSeq STARFusion 1000Genome CYTH1-DIAPH1 CYTH1 chr17 76778284 - DIAPH1 chr5 140956438 - Exonic hg19 Non-Cancer ERR315486 2 0 Out-of-frame Inter-chr q25.3 q31.3 131585 ChimerSeq STARFusion 1000Genome DHX9-GLUL DHX9 chr1 182808591 + GLUL chr1 182357885 - Exonic hg19 Non-Cancer ERR315486 2 0 5'UTR-5'UTR Intra-chr q25.3 q25.3 131586 ChimerSeq STARFusion 1000Genome FUS-ATP6V0C FUS chr16 31191548 + ATP6V0C chr16 2569219 + Exonic hg19 Non-Cancer ERR315486 2 0 In-Frame Intra-chr p11.2 Tumor suppressor gene p13.3 131587 ChimerSeq STARFusion 1000Genome GPR35-PTMA GPR35 chr2 241564985 + PTMA chr2 232576058 + Exonic hg19 Non-Cancer ERR315486 2 0 5'UTR-CDS Intra-chr q37.3 q37.1 131588 ChimerSeq STARFusion 1000Genome GPSM1-TMC6 GPSM1 chr9 139234272 + TMC6 chr17 76122987 - Exonic hg19 Non-Cancer ERR315486 2 0 CDS-5'UTR Inter-chr q34.3 q25.3 131589 ChimerSeq STARFusion 1000Genome GSE1-ADRM1 GSE1 chr16 85647004 + ADRM1 chr20 60878624 + Exonic hg19 Non-Cancer ERR315486 2 0 Out-of-frame Inter-chr q24.1 q13.33 131590 ChimerSeq STARFusion 1000Genome GSE1-SELO GSE1 chr16 85647004 + SELO chr22 50648610 + Exonic hg19 Non-Cancer ERR315486 2 0 Out-of-frame Inter-chr q24.1 131591 ChimerSeq STARFusion 1000Genome GSE1-SLC7A5 GSE1 chr16 85647004 + SLC7A5 chr16 87874761 - Exonic hg19 Non-Cancer ERR315486 2 0 Out-of-frame Intra-chr q24.1 q24.2 131592 ChimerSeq STARFusion 1000Genome HMGN2-SEPT5 HMGN2 chr1 26799118 + SEPT5 chr22 19707125 + Exonic hg19 Non-Cancer ERR315486 2 0 In-Frame Inter-chr p36.11 q11.21 131593 ChimerSeq STARFusion 1000Genome HNRNPH1-HMGB1 HNRNPH1 chr5 179050596 - HMGB1 chr13 31037831 - Exonic hg19 Non-Cancer ERR315486 2 0 5'UTR-5'UTR Inter-chr q35.3 q12.3 131594 ChimerSeq STARFusion 1000Genome KDM4B-OAZ1 KDM4B chr19 5144913 + OAZ1 chr19 2271781 + Exonic hg19 Non-Cancer ERR315486 2 0 In-Frame Intra-chr p13.3 p13.3 131595 ChimerSeq STARFusion 1000Genome LCP1-LRCH1 LCP1 chr13 46756246 - LRCH1 chr13 47266671 + Exonic hg19 Non-Cancer ERR315486 2 0 Out-of-frame Intra-chr q14.13 q14.13 131596 ChimerSeq STARFusion 1000Genome MAEA-ATP6V0C MAEA chr4 1283770 + ATP6V0C chr16 2569219 + Exonic hg19 Non-Cancer ERR315486 2 0 Out-of-frame Inter-chr p16.3 p13.3 131597 ChimerSeq STARFusion 1000Genome PTBP1-BSG PTBP1 chr19 797505 + BSG chr19 579500 + Exonic hg19 Non-Cancer ERR315486 2 0 Out-of-frame Intra-chr p13.3 p13.3 131598 ChimerSeq STARFusion 1000Genome SCAF11-CNIH4 SCAF11 chr12 46339032 - CNIH4 chr1 224553581 + Exonic hg19 Non-Cancer ERR315486 2 0 Out-of-frame Inter-chr q12 q42.11 131599 ChimerSeq STARFusion 1000Genome SENP3-GNAS SENP3 chr17 7474251 + GNAS chr20 57470667 + Exonic hg19 Non-Cancer ERR315486 2 0 Out-of-frame Inter-chr p13.1 q13.32 Oncogene 131600 ChimerSeq STARFusion 1000Genome SLC16A3-BID SLC16A3 chr17 80186982 + BID chr22 18222254 - Exonic hg19 Non-Cancer ERR315486 2 0 5'UTR-5'UTR Inter-chr q25.3 q11.21 131601 ChimerSeq STARFusion 1000Genome SLC19A1-ZADH2 SLC19A1 chr21 46945731 - ZADH2 chr18 72914295 - Exonic hg19 Non-Cancer ERR315486 2 0 Out-of-frame Inter-chr q22.3 q22.3 131602 ChimerSeq STARFusion 1000Genome ST3GAL1-PTMA ST3GAL1 chr8 134583936 - PTMA chr2 232576058 + Exonic hg19 Non-Cancer ERR315486 2 0 Out-of-frame Inter-chr q24.22 q37.1 131603 ChimerSeq STARFusion 1000Genome VMP1-SDC2 VMP1 chr17 57842499 + SDC2 chr8 97605708 + Exonic hg19 Non-Cancer ERR315486 2 0 In-Frame Inter-chr q23.1 q22.1 131604 ChimerSeq STARFusion 1000Genome YPEL5-FURIN YPEL5 chr2 30369928 + FURIN chr15 91418812 + Exonic hg19 Non-Cancer ERR315486 2 0 5'UTR-5'UTR Inter-chr p23.1 q26.1 131605 ChimerSeq STARFusion 1000Genome YWHAZ-AZIN1 YWHAZ chr8 101964157 - AZIN1 chr8 103870378 - Exonic hg19 Non-Cancer ERR315486 2 0 5'UTR-5'UTR Intra-chr q22.3 q22.3 131606 ChimerSeq STARFusion 1000Genome EIF1AX-RPS6KA3 EIF1AX chrX 20153856 - RPS6KA3 chrX 20181158 - Exonic hg19 Non-Cancer ERR315461 2 0 In-Frame Intra-chr p22.12 p22.12 131607 ChimerSeq STARFusion 1000Genome HEATR1-MKNK2 HEATR1 chr1 236713872 - MKNK2 chr19 2037806 - Exonic hg19 Non-Cancer ERR315460 3 0 Out-of-frame Inter-chr q43 p13.3 131608 ChimerSeq STARFusion 1000Genome ISOC1-DCP2 ISOC1 chr5 128442755 + DCP2 chr5 112321532 + Exonic hg19 Non-Cancer ERR315460 2 0 Out-of-frame Intra-chr q23.3 q22.2 131609 ChimerSeq FusionScan TCGA_RNA-Seq COMMD10-AP3S1 COMMD10 chr5 115428397 '+' AP3S1 chr5 115230783 '+' Exonic hg19 LGG TCGA-DH-A7US 2 In-Frame Intra-chr q23.1 q22.3 KB Pub Seq+ 131610 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COMMD10-AP3S1 COMMD10 chr5 115428397 '-' AP3S1 chr5 115230784 '+' Exonic hg19 BLCA TCGA-2F-A9KT-01A 12 6 In-frame Intra-chr q23.1 q22.3 KB Pub Seq+ 131611 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COMMD10-AP3S1 COMMD10 chr5 115428397 '-' AP3S1 chr5 115230784 '+' Exonic hg19 LGG TCGA-DB-5273-01A 15 5 In-frame Intra-chr q23.1 q22.3 KB Pub Seq+ 131612 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COMMD10-AP3S1 COMMD10 chr5 115428397 '-' AP3S1 chr5 115230784 '+' Exonic hg19 LGG TCGA-DH-A7US-01A 6 7 In-frame Intra-chr q23.1 q22.3 KB Pub Seq+ 131613 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq COMMD10-AP3S1 COMMD10 chr5 115428397 '-' AP3S1 chr5 115230784 '+' Exonic hg19 BLCA TCGA-GV-A3QI-01A 50 9 In-frame Intra-chr q23.1 q22.3 KB Pub Seq+ 131614 ChimerSeq STARFusion TCGA_RNA-Seq COMMD10-AP3S1 COMMD10 chr5 115469875 '+' AP3S1 chr5 115202367 '+' Exonic hg19 LUAD TCGA-55-A490 2 6 In-Frame Intra-chr q23.1 q22.3 KB Pub Seq+ 131615 ChimerSeq STARFusion TCGA_RNA-Seq COMMD10-AP3S1 COMMD10 chr5 115469875 '+' AP3S1 chr5 115249059 '+' Exonic hg19 STAD TCGA-CG-5721-01A 2 0 In-Frame Intra-chr q23.1 q22.3 KB Pub Seq+ 131616 ChimerSeq STARFusion TCGA_RNA-Seq COMMD10-AP3S1 COMMD10 chr5 115428397 '+' AP3S1 chr5 115230784 '+' Exonic hg19 UCEC TCGA-D1-A0ZR-01A 5 0 In-Frame Intra-chr q23.1 q22.3 KB Pub Seq+ 131617 ChimerSeq FusionScan TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029300 '-' RAB38 chr11 87883123 '-' Exonic hg19 LUAD TCGA-64-1681 2 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131618 ChimerSeq FusionScan TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029300 '-' RAB38 chr11 87883123 '-' Exonic hg19 LUAD TCGA-55-8089 2 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131619 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 ACC TCGA-OR-A5J8-01A 2 16 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131620 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87847308 '-' Exonic hg19 ACC TCGA-OR-A5K5-01A 2 5 Out-of-frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131621 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 ACC TCGA-OR-A5KZ-01A 2 5 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131622 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 ACC TCGA-PK-A5HB-01A 2 11 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131623 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 ACC TCGA-OR-A5JP-01A 3 21 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131624 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-FD-A62N-01A 2 13 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131625 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-KQ-A41S-01A 2 3 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131626 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-CU-A0YN-01A 5 26 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131627 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-UY-A78M-01A 3 3 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131628 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-ZF-AA56 3 13 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131629 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-DK-A1AB-01A 2 9 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131630 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-BL-A13J-01A 2 3 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131631 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-C4-A0F1-01A 3 35 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131632 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-C4-A0F1-01A 3 35 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131633 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-XF-A8HE-01A 3 5 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131634 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-XF-A8HE-01A 2 5 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131635 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-DK-A1AF-01A 2 7 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131636 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-DK-A2I2-01A 3 21 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131637 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-FD-A62S-01A 2 10 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131638 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-FD-A5BR-01A 2 6 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131639 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-GV-A3JZ-01A 3 7 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131640 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-FD-A3B6-01A 2 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131641 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-FD-A3B3-01A 3 15 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131642 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-DK-AA74 2 2 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131643 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-DK-A1AA-01A 2 4 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131644 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-4Z-AA82 4 18 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131645 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-K4-A5RJ-01A 3 9 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131646 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-CU-A3KJ-01A 8 9 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131647 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-FD-A43Y-01A 2 3 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131648 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-DK-A3WX-01A 2 3 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131649 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-K4-A5RH-01A 2 45 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131650 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-K4-A5RH-01A 2 45 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131651 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-BL-A5ZZ-01A 2 11 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131652 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-DK-A3IN-01A 4 11 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131653 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-GD-A3OQ-01A 3 12 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131654 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-BT-A3PJ-01A 3 11 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131655 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-BL-A13J-01A 2 6 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131656 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-XF-AAME 3 3 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131657 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-ZF-AA4R-01A 2 3 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131658 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-CF-A1HS-01A 2 11 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131659 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-GU-A766-01A 2 20 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131660 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-GC-A3RC-01A 14 94 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131661 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-GC-A3RC-01A 3 94 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131662 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-XF-A9SM 3 6 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131663 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-FD-A3B4-01A 2 13 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131664 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-G2-A2EC-01A 2 6 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131665 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-FD-A62O-01A 2 2 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131666 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-ZF-AA4N-01A 2 34 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131667 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-ZF-AA4N-01A 2 34 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131668 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-GU-A762-01A 5 40 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131669 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-FD-A3SO-01A 3 32 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131670 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 BLCA TCGA-K4-A3WV-01A 2 16 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131671 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 CESC TCGA-FU-A3HZ-01A 2 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131672 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 CESC TCGA-EK-A2RE-01A 3 3 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131673 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 CESC TCGA-ZJ-A8QR-01A 4 25 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131674 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 CESC TCGA-C5-A7UC-01A 2 12 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131675 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 CESC TCGA-VS-A8QC-01A 2 6 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131676 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 CESC TCGA-DS-A1O9 2 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131677 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 CESC TCGA-MA-AA3W-01A 3 4 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131678 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 CESC TCGA-MA-AA42-01A 3 11 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131679 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 CESC TCGA-LP-A4AX-01A 4 16 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131680 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 CESC TCGA-ZJ-A8QQ-01A 2 5 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131681 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 CESC TCGA-C5-A2M1-01A 2 18 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131682 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 CESC TCGA-VS-A94Y-01A 11 33 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131683 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 CESC TCGA-C5-A1BN-01B 2 11 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131684 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 CESC TCGA-LP-A7HU-01A 2 4 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131685 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 CESC TCGA-JW-A5VH-01A 3 24 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131686 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 CESC TCGA-JX-A3PZ-01A 3 13 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131687 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 CESC TCGA-JX-A3PZ-01A 2 13 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131688 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 CESC TCGA-FU-A23L-01A 2 4 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131689 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 CESC TCGA-FU-A40J-01A 2 2 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131690 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 CESC TCGA-C5-A7CH-01A 8 23 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131691 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 CESC TCGA-C5-A7CG-01A 2 11 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131692 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 CESC TCGA-EX-A3L1-01A 2 19 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131693 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 CESC TCGA-DS-A0VN-01A 3 7 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131694 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 CESC TCGA-EA-A3HR-01A 2 4 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131695 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 CHOL TCGA-ZH-A8Y2-01A 7 39 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131696 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 CHOL TCGA-W5-AA38-01A 2 4 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131697 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 DLBC TCGA-GS-A9U3 2 10 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131698 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 DLBC TCGA-GS-A9TU 2 12 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131699 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 DLBC TCGA-GS-A9TX 2 6 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131700 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 DLBC TCGA-FF-A7CQ 3 20 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131701 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 DLBC TCGA-FF-A7CR 3 7 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131702 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 DLBC TCGA-FF-A7CR 2 7 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131703 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 DLBC TCGA-FA-A4XK-01A 2 14 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131704 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-0171-02A 7 2 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131705 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-28-5207-01A 2 2 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131706 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-0221-02A 2 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131707 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-32-1980-01A 4 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131708 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-12-5295-01A 2 2 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131709 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-2567-01A 2 5 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131710 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-2558-01A 2 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131711 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-19-4065-01A 13 11 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131712 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-2559-01A 2 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131713 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-0649-01B 3 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131714 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-0156-01A 2 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131715 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-27-2524-01A 2 2 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131716 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-5410-01A 8 11 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131717 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-5410-01A 4 11 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131718 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-0184-01A 2 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131719 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-0129-01A 2 4 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131720 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-0174-01A 2 4 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131721 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-0174-01A 2 4 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131722 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-02-0055-01A 3 2 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131723 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-16-1045-01B 2 7 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131724 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-76-4927-01A 3 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131725 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-0125-01A 2 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131726 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-0882-01A 2 2 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131727 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-0646-01A 2 2 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131728 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-0646-01A 2 2 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131729 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-0644-01A 5 4 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131730 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-0644-01A 2 4 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131731 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-2557-01A 3 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131732 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-32-5222-01A 2 2 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131733 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-5411-01A 2 2 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131734 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-0645-01A 2 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131735 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-0686-01A 2 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131736 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-28-1753-01A 2 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131737 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-5415-01A 2 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131738 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-12-0821-01A 2 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131739 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-0238-01A 4 3 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131740 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-27-2519-01A 2 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131741 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-5413-01A 2 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131742 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-0210-02A 4 4 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131743 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-28-5213-01A 2 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131744 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-0210-01A 2 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131745 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-12-1597-01B 3 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131746 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-19-4065-02A 6 7 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131747 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-27-1830-01A 2 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131748 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-32-2616-01A 8 5 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131749 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-2564-01A 2 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131750 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-28-2513-01A 3 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131751 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-41-3915-01A 2 2 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131752 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-0138-01A 3 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131753 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-0190-02A 5 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131754 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-0190-02A 2 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131755 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-0152-02A 3 2 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131756 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-12-0619-01A 2 3 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131757 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-12-0619-01A 2 3 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131758 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-12-0618-01A 4 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131759 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-5416-01A 3 2 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131760 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-76-4928-01B 4 3 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131761 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-32-2615-01A 3 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131762 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-0141-01A 2 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131763 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 GBM TCGA-06-0211-02A 4 3 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131764 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 KICH TCGA-KL-8344-01A 2 9 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131765 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 MESO TCGA-MQ-A6BR-01A 2 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131766 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 MESO TCGA-MQ-A4LM-01A 3 12 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131767 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 MESO TCGA-TS-A7P0-01A 3 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131768 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 MESO TCGA-TS-A8AV 4 20 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131769 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 PCPG TCGA-S7-A7WX-01A 3 6 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131770 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 SARC TCGA-DX-AB30-01A 2 9 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131771 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 SARC TCGA-DX-A7ES-01A 5 26 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131772 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 SARC TCGA-DX-A7ES-01A 3 26 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131773 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 SARC TCGA-QQ-A5VA-01A 6 35 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131774 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 SARC TCGA-QQ-A5VA-01A 2 35 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131775 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 SARC TCGA-K1-A6RT-01A 6 11 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131776 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 SARC TCGA-DX-AB2H-01A 4 13 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131777 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 SARC TCGA-DX-AB2S-01A 2 7 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131778 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 SARC TCGA-IE-A4EJ-01A 2 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131779 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 SARC TCGA-MB-A8JK-01A 2 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131780 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 SARC TCGA-N1-A6IA-01A 15 69 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131781 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 SARC TCGA-N1-A6IA-01A 3 69 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131782 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 SARC TCGA-DX-AB2G-01A 7 22 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131783 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 SARC TCGA-DX-AB2G-01A 3 22 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131784 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 SARC TCGA-DX-AB2O-01A 3 13 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131785 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 SARC TCGA-FX-A2QS-01A 4 10 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131786 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 SARC TCGA-FX-A2QS-01A 3 10 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131787 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 SARC TCGA-K1-A3PO-01A 3 14 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131788 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 SARC TCGA-DX-AB2F-01A 3 16 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131789 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-BR-8058-01A 4 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131790 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-FP-7998-01A 15 7 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131791 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-BR-A4J5-01A 2 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131792 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-HU-A4GJ-01A 3 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131793 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-HU-A4GT-01A 4 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131794 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-CG-4474-01A 3 2 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131795 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-BR-8365-01A 3 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131796 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-BR-4253-01A 2 12 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131797 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-BR-8364-01A 2 2 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131798 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-BR-8364-01A 2 2 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131799 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-BR-4367-01A 2 3 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131800 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-EQ-8122-01A 2 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131801 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-D7-6818-01A 3 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131802 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-BR-4187-01A 36 22 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131803 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-HF-7134-01A 17 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131804 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-CD-5813-01A 2 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131805 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-BR-8372-01A 3 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131806 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-BR-4256-01A 21 14 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131807 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-BR-4256-01A 8 14 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131808 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-BR-A4PE-01A 4 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131809 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-BR-8059-01A 3 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131810 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-D7-8570-01A 5 9 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131811 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-EQ-A4SO-01A 2 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131812 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-D7-A4YU-01A 17 3 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131813 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-B7-5816-01A 5 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131814 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-BR-A4IY-01A 7 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131815 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-BR-A4IY-01A 3 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131816 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-D7-A4Z0-01A 2 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131817 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 STAD TCGA-HU-A4HB-01A 2 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131818 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 THYM TCGA-X7-A8M0 2 2 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131819 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 THYM TCGA-X7-A8DB 2 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131820 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 THYM TCGA-XM-A8R8 3 4 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131821 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 UCEC TCGA-E6-A8L9-01A 2 6 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131822 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 UCEC TCGA-5B-A90C 2 9 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131823 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 UCEC TCGA-EY-A72D-01A 6 15 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131824 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 UCEC TCGA-B5-A5OC-01A 2 3 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131825 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 UCEC TCGA-5B-A90C-01A 2 9 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131826 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 UCEC TCGA-A5-A1OH-01A 2 10 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131827 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 UCEC TCGA-D1-A15Z-01A 5 0 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131828 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 UCS TCGA-N8-A4PP 3 11 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131829 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 UCS TCGA-N5-A4RU 2 5 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131830 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033698 '-' RAB38 chr11 87883123 '-' Exonic hg19 UVM TCGA-V4-A9F8 2 1 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131831 ChimerSeq STARFusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029301 '-' RAB38 chr11 87883123 '-' Exonic hg19 UVM TCGA-V4-A9F1 2 5 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131832 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88029300 '-' RAB38 chr11 87883122 '-' Exonic hg19 HNSC TCGA-CV-7235-01A 299 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131833 ChimerSeq Tophat-Fusion TCGA_RNA-Seq CTSC-RAB38 CTSC chr11 88033697 '-' RAB38 chr11 87883122 '-' Exonic hg19 HNSC TCGA-CV-7235-01A 324 In-Frame Intra-chr q14.2 q14.2 KB Pub Seq+ 131834 ChimerSeq FusionScan TCGA_RNA-Seq MAPKAPK5-ACAD10 MAPKAPK5 chr12 112308984 '+' ACAD10 chr12 112182446 '+' Exonic hg19 BRCA TCGA-E2-A15J 2 Out-of-Frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 KB Pub Seq+ 131835 ChimerSeq FusionScan TCGA_RNA-Seq MAPKAPK5-ACAD10 MAPKAPK5 chr12 112308984 '+' ACAD10 chr12 112182446 '+' Exonic hg19 LGG TCGA-DU-6403 2 Out-of-Frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 KB Pub Seq+ 131836 ChimerSeq FusionScan TCGA_RNA-Seq MAPKAPK5-ACAD10 MAPKAPK5 chr12 112308984 '+' ACAD10 chr12 112182446 '+' Exonic hg19 OV TCGA-09-0364 7 Out-of-Frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 KB Pub Seq+ 131837 ChimerSeq FusionScan TCGA_RNA-Seq MAPKAPK5-ACAD10 MAPKAPK5 chr12 112308984 '+' ACAD10 chr12 112182446 '+' Exonic hg19 UCEC TCGA-D1-A1NY 3 Out-of-Frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 KB Pub Seq+ 131838 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK5-ACAD10 MAPKAPK5 chr12 112308984 '+' ACAD10 chr12 112182447 '+' Exonic hg19 BRCA TCGA-AR-A254-01A 14 52 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 KB Pub Seq+ 131839 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK5-ACAD10 MAPKAPK5 chr12 112308984 '+' ACAD10 chr12 112182447 '+' Exonic hg19 BRCA TCGA-E2-A15J-01A 4 25 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 KB Pub Seq+ 131840 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK5-ACAD10 MAPKAPK5 chr12 112308984 '+' ACAD10 chr12 112182447 '+' Exonic hg19 BRCA TCGA-A2-A0YG-01A 7 24 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 KB Pub Seq+ 131841 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK5-ACAD10 MAPKAPK5 chr12 112308984 '+' ACAD10 chr12 112182447 '+' Exonic hg19 CESC TCGA-EK-A2RA-01A 2 28 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 KB Pub Seq+ 131842 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK5-ACAD10 MAPKAPK5 chr12 112308984 '+' ACAD10 chr12 112182447 '+' Exonic hg19 CHOL TCGA-W5-AA2O-01A 5 19 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 KB Pub Seq+ 131843 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK5-ACAD10 MAPKAPK5 chr12 112308984 '+' ACAD10 chr12 112182447 '+' Exonic hg19 DLBC TCGA-GS-A9TX 7 15 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 KB Pub Seq+ 131844 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK5-ACAD10 MAPKAPK5 chr12 112308984 '+' ACAD10 chr12 112182447 '+' Exonic hg19 KIRC TCGA-B0-4815-01A 11 28 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 KB Pub Seq+ 131845 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK5-ACAD10 MAPKAPK5 chr12 112308984 '+' ACAD10 chr12 112182447 '+' Exonic hg19 PCPG TCGA-QR-A70P-01A 3 15 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 KB Pub Seq+ 131846 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK5-ACAD10 MAPKAPK5 chr12 112308984 '+' ACAD10 chr12 112182447 '+' Exonic hg19 SARC TCGA-DX-A3LT-01A 2 21 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 KB Pub Seq+ 131847 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK5-ACAD10 MAPKAPK5 chr12 112308984 '+' ACAD10 chr12 112182447 '+' Exonic hg19 SKCM TCGA-EB-A6R0-01A 17 65 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 KB Pub Seq+ 131848 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK5-ACAD10 MAPKAPK5 chr12 112308984 '+' ACAD10 chr12 112182447 '+' Exonic hg19 SKCM TCGA-EE-A184-06A 4 19 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 KB Pub Seq+ 131849 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK5-ACAD10 MAPKAPK5 chr12 112308984 '+' ACAD10 chr12 112182447 '+' Exonic hg19 SKCM TCGA-EE-A20H-06A 19 66 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 KB Pub Seq+ 131850 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK5-ACAD10 MAPKAPK5 chr12 112308984 '+' ACAD10 chr12 112182447 '+' Exonic hg19 SKCM TCGA-ER-A19D-06A 21 99 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 KB Pub Seq+ 131851 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK5-ACAD10 MAPKAPK5 chr12 112308984 '+' ACAD10 chr12 112182447 '+' Exonic hg19 THCA TCGA-BJ-A28V-01A 7 41 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 KB Pub Seq+ 131852 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK5-ACAD10 MAPKAPK5 chr12 112308984 '+' ACAD10 chr12 112182447 '+' Exonic hg19 THCA TCGA-FY-A40K-01A 12 43 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 KB Pub Seq+ 131853 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK5-ACAD10 MAPKAPK5 chr12 112308984 '+' ACAD10 chr12 112182447 '+' Exonic hg19 UCEC TCGA-D1-A1NY-01A 5 0 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 KB Pub Seq+ 131854 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK5-ACAD10 MAPKAPK5 chr12 112308984 '+' ACAD10 chr12 112182447 '+' Exonic hg19 UVM TCGA-YZ-A983 4 20 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 KB Pub Seq+ 131855 ChimerSeq STARFusion TCGA_RNA-Seq MAPKAPK5-ACAD10 MAPKAPK5 chr12 112308984 '+' ACAD10 chr12 112182447 '+' Exonic hg19 UVM TCGA-V4-A9EE 9 51 Out-of-frame Intra-chr q24.12 CAMK:MAPKAPK q24.12 KB Pub Seq+ 131856 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 COAD TCGA-G4-6309-01A 2 2 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131857 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 COAD TCGA-CK-4947-01B 2 2 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131858 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 COAD TCGA-AA-3713-01A 2 2 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131859 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 COAD TCGA-AY-6197-01A 2 2 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131860 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 COAD TCGA-F4-6569-01A 4 2 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131861 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 COAD TCGA-D5-6539-01A 2 1 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131862 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 COAD TCGA-A6-6651-01A 2 0 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131863 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 GBM TCGA-32-2634-01A 2 0 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131864 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 KICH TCGA-KN-8429-01A 2 2 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131865 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 KICH TCGA-KL-8336-01A 2 5 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131866 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 KICH TCGA-KM-8639-01A 3 7 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131867 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 KICH TCGA-KL-8343-01A 2 1 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131868 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 KICH TCGA-KN-8434-01A 2 3 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131869 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 KICH TCGA-KM-8639 3 7 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131870 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 KICH TCGA-KN-8425-01A 3 1 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131871 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 KICH TCGA-KL-8329-01A 3 2 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131872 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 LUAD TCGA-44-2666-01A 2 1 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131873 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 PCPG TCGA-WB-A81D-01A 2 10 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131874 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 PCPG TCGA-WB-A818-01A 3 1 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131875 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 PCPG TCGA-P7-A5NY-01A 4 3 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131876 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 PCPG TCGA-W2-A7HB-01A 6 5 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131877 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 PCPG TCGA-P7-A5NY-05A 7 7 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131878 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 PCPG TCGA-RW-A67Y-01A 4 7 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131879 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 PCPG TCGA-TT-A6YJ-01A 3 1 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131880 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 PCPG TCGA-W2-A7H5-01B 4 17 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131881 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 PCPG TCGA-RW-A688-01A 2 3 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131882 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 SARC TCGA-QQ-A5VA-01A 2 0 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131883 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 SARC TCGA-K1-A42X-02A 3 8 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131884 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 SARC TCGA-KD-A5QT-01A 2 3 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131885 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 SARC TCGA-X6-A8C7-01A 2 1 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131886 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 SKCM TCGA-D3-A8GE-06A 2 4 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131887 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 SKCM TCGA-EE-A20I-06A 2 2 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131888 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 SKCM TCGA-EE-A29E-06A 2 1 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131889 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 SKCM TCGA-EE-A2A5-06A 2 5 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131890 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 SKCM TCGA-EE-A2GT-06A 3 2 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131891 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 SKCM TCGA-ER-A19A-06A 2 2 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131892 ChimerSeq STARFusion TCGA_RNA-Seq SAMD5-SASH1 SAMD5 chr6 147830523 '+' SASH1 chr6 148711270 '+' Exonic hg19 SKCM TCGA-FS-A1ZD-06A 2 5 In-Frame Intra-chr q24.3 q24.3 Tumor suppressor gene KB Pub 131893 ChimerSeq FusionScan TCGA_RNA-Seq SETD2-CCDC12 SETD2 chr3 47147486 '-' CCDC12 chr3 46982555 '-' Exonic hg19 BRCA TCGA-AC-A6IW 2 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 KB Seq+ 131894 ChimerSeq FusionScan TCGA_RNA-Seq SETD2-CCDC12 SETD2 chr3 47155365 '-' CCDC12 chr3 46967025 '-' Exonic hg19 ESCA TCGA-IG-A3YC 2 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 KB Seq+ 131895 ChimerSeq FusionScan TCGA_RNA-Seq SETD2-CCDC12 SETD2 chr3 47155365 '-' CCDC12 chr3 46967025 '-' Exonic hg19 ESCA TCGA-IG-A3YC 2 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 KB Seq+ 131896 ChimerSeq FusionScan TCGA_RNA-Seq SETD2-CCDC12 SETD2 chr3 47147486 '-' CCDC12 chr3 46982555 '-' Exonic hg19 ESCA TCGA-L5-A891 2 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 KB Seq+ 131897 ChimerSeq FusionScan TCGA_RNA-Seq SETD2-CCDC12 SETD2 chr3 47147486 '-' CCDC12 chr3 46982555 '-' Exonic hg19 ESCA TCGA-L5-A891 2 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 KB Seq+ 131898 ChimerSeq FusionScan TCGA_RNA-Seq SETD2-CCDC12 SETD2 chr3 47205343 '-' CCDC12 chr3 46982555 '-' Exonic hg19 HNSC TCGA-CV-A45P 2 Out-of-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 KB Seq+ 131899 ChimerSeq STARFusion TCGA_RNA-Seq SETD2-CCDC12 SETD2 chr3 47158113 '-' CCDC12 chr3 46982555 '-' Exonic hg19 BLCA TCGA-FD-A6TK-01A 5 17 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 KB Seq+ 131900 ChimerSeq STARFusion TCGA_RNA-Seq SETD2-CCDC12 SETD2 chr3 47147487 '-' CCDC12 chr3 46982555 '-' Exonic hg19 BRCA TCGA-AC-A6IW-01A 16 61 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 KB Seq+ 131901 ChimerSeq STARFusion TCGA_RNA-Seq SETD2-CCDC12 SETD2 chr3 47139445 '-' CCDC12 chr3 46982555 '-' Exonic hg19 BRCA TCGA-AC-A6IW-01A 4 61 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 KB Seq+ 131902 ChimerSeq STARFusion TCGA_RNA-Seq SETD2-CCDC12 SETD2 chr3 47205344 '-' CCDC12 chr3 46982555 '-' Exonic hg19 HNSC TCGA-CV-A45P 5 17 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 KB Seq+ 131903 ChimerSeq STARFusion TCGA_RNA-Seq SETD2-CCDC12 SETD2 chr3 47205344 '-' CCDC12 chr3 46967025 '-' Exonic hg19 KIRC TCGA-B0-5712-01A 3 2 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 KB Seq+ 131904 ChimerSeq STARFusion TCGA_RNA-Seq SETD2-CCDC12 SETD2 chr3 47205344 '-' CCDC12 chr3 46982555 '-' Exonic hg19 MESO TCGA-MQ-A4KX-01A 3 5 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 KB Seq+ 131905 ChimerSeq STARFusion TCGA_RNA-Seq SETD2-CCDC12 SETD2 chr3 47205344 '-' CCDC12 chr3 47018333 '-' Exonic hg19 MESO TCGA-MQ-A4KX-01A 2 5 Out-of-frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 KB Seq+ 131906 ChimerSeq STARFusion TCGA_RNA-Seq SETD2-CCDC12 SETD2 chr3 47205344 '-' CCDC12 chr3 46967025 '-' Exonic hg19 STAD TCGA-CG-4441-01A 51 0 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 KB Seq+ 131907 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SETD2-CCDC12 SETD2 chr3 47205343 '-' CCDC12 chr3 47018332 '-' Exonic hg19 MESO TCGA-MQ-A4KX-01A 3 CDS-5'UTR Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 KB Seq+ 131908 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SETD2-CCDC12 SETD2 chr3 47205343 '-' CCDC12 chr3 46982554 '-' Exonic hg19 MESO TCGA-MQ-A4KX-01A 2 Out-of-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 KB Seq+ 131909 ChimerSeq Tophat-Fusion TCGA_RNA-Seq SETD2-CCDC12 SETD2 chr3 47147486 '-' CCDC12 chr3 46982554 '-' Exonic hg19 BRCA TCGA-AC-A6IW-01A 34 In-Frame Intra-chr p21.31 Oncogene Tumor suppressor gene p21.31 KB Seq+ 131910 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866283 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-2A-A8VL-01A 29 14 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131911 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-2A-A8VT-01A 82 37 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131912 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-2A-A8VV-01A 47 45 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131913 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866283 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-2A-AAYU-01A 644 237 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131914 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-4L-AA1F-01A 50 47 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131915 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5739-01A 30 16 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131916 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5740-01A 45 42 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131917 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5741-01A 159 169 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131918 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5743-01A 3 1 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131919 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5746-01A 15 7 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131920 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5752-01A 70 68 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131921 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5764-01A 9 4 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131922 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5765-01A 13 27 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131923 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-CH-5768-01A 18 10 5UTR-5UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131924 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5769-01A 43 28 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131925 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866283 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5789-01A 59 29 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131926 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5790-01A 31 17 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131927 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5791-01A 16 16 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131928 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5794-01A 47 24 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131929 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5495-01A 21 9 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131930 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5496-01A 21 18 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131931 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5497-01A 47 41 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131932 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5498-01A 8 2 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131933 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5499-01A 61 71 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131934 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42860321 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5502-01A 231 128 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131935 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5506-01A 7 10 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131936 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5507-01A 18 10 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131937 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5508-01A 9 4 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131938 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878372 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5512-01A 7 5 NA Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131939 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5516-01A 20 16 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131940 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5521-01A 103 65 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131941 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-EJ-5522-01A 24 20 5UTR-5UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131942 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5524-01A 34 14 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131943 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5525-01A 49 42 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131944 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5526-01A 144 65 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131945 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5527-01A 10 20 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131946 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5530-01A 172 103 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131947 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5542-01A 8 12 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131948 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-7315-01A 48 44 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131949 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-7321-01A 29 40 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131950 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-7325-01B 28 21 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131951 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-7327-01A 148 92 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131952 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-7328-01A 13 7 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131953 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-7783-01A 30 11 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131954 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-7784-01A 65 57 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131955 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878372 '-' ERG chr21 39795483 '-' Exonic hg19 PRAD TCGA-EJ-7785-01A 47 14 NA Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131956 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-7793-01A 43 50 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131957 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-7797-01A 37 25 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131958 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-8469-01A 55 49 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131959 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-8472-01A 32 11 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131960 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-A46D-01A 15 12 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131961 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-A46F-01A 9 16 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131962 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-A65D-01A 11 7 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131963 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-A65F-01A 21 15 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131964 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-A7NF-01A 9 12 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131965 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-A8FO-01A 87 61 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131966 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-FC-7708-01A 32 48 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131967 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6329-01A 384 292 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131968 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6332-01A 153 116 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131969 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39795483 '-' Exonic hg19 PRAD TCGA-G9-6342-01A 70 21 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131970 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6351-01A 10 4 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131971 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6353-01A 10 7 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131972 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6354-01A 25 24 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131973 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6356-01A 4 1 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131974 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6361-01A 12 13 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131975 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6362-01A 4 5 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131976 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6363-01A 4 4 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131977 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6364-01A 4 1 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131978 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6365-01A 16 16 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131979 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6373-01A 5 2 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131980 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6377-01A 12 6 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131981 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6384-01A 43 15 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131982 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6385-01A 4 2 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131983 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-G9-7509-01A 17 5 5UTR-5UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131984 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-7525-01A 7 7 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131985 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878372 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-A9S4-01A 20 11 NA Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131986 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-A9S7-01A 80 57 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131987 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-H9-A6BY-01A 25 35 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131988 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-7077-01A 18 5 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131989 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-7081-01A 23 12 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131990 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-7209-01A 35 21 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131991 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-7212-01A 99 79 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131992 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-7213-01A 30 14 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131993 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-7230-01A 61 53 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131994 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-7231-01A 21 22 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131995 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-7232-01A 44 32 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131996 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-7744-01A 53 47 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131997 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-7747-01A 6 3 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131998 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-HC-7818-01A 6 3 5UTR-5UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 131999 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-7819-01A 40 11 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132000 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-8213-01A 10 9 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132001 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-HC-8257-01A 40 48 CDS-5UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132002 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878372 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-8259-01A 30 17 NA Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132003 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-8260-01A 6 3 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132004 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-8262-01A 45 46 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132005 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-A48F-01A 16 13 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132006 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-HC-A632-01A 29 21 CDS-5UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132007 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-A6HY-01A 18 11 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132008 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-A76X-01A 165 142 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132009 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-A8D0-01A 14 12 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132010 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-A8D1-01A 24 8 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132011 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J4-8198-01A 17 11 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132012 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J4-A67K-01A 26 34 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132013 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J4-A67L-01A 3 6 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132014 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J4-A67R-01A 3 4 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132015 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J4-A67S-01A 29 16 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132016 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-J4-A67T-01A 4 8 5UTR-5UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132017 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J4-A6G1-01A 2 3 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132018 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J4-A6M7-01A 99 54 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132019 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J4-A83I-01A 48 37 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132020 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J4-A83J-01A 8 6 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132021 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J4-A83K-01A 46 21 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132022 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-J4-AATV-01A 4 3 5UTR-5UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132023 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J9-A52B-01A 136 81 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132024 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39795483 '-' Exonic hg19 PRAD TCGA-J9-A8CK-01A 89 58 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132025 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J9-A8CM-01A 24 21 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132026 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KC-A4BN-01A 13 4 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132027 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KC-A4BR-01A 14 8 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132028 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KC-A4BV-01A 28 13 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132029 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KC-A7F6-01A 15 17 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132030 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A59Y-01A 13 7 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132031 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42860321 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A6DY-01A 140 77 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132032 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A6E1-01A 104 35 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132033 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A6E2-01A 176 112 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132034 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A6E4-01A 9 5 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132035 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A6E6-01A 22 13 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132036 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A7AU-01A 17 15 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132037 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A7B1-01A 71 59 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132038 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866283 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A7B2-01A 48 24 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132039 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A7B4-01A 50 34 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132040 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A8I4-01A 13 10 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132041 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A8I8-01A 21 10 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132042 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A8IA-01A 29 18 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132043 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A8IC-01A 53 40 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132044 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866283 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A8IH-01A 162 73 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132045 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A8II-01A 58 24 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132046 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-KK-A8IM-01A 15 20 5UTR-5UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132047 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-M7-A71Z-01A 19 19 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132048 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-MG-AAMC-01A 41 27 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132049 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-QU-A6IN-01A 7 20 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132050 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-TP-A8TT-01A 18 26 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132051 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-V1-A8MK-01A 5 6 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132052 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-V1-A8WS-01A 101 94 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132053 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-V1-A9O9-01A 217 309 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132054 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-V1-A9OY-01A 6 1 5UTR-5UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132055 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-V1-A9ZG-01A 49 43 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132056 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-VN-A88K-01A 21 11 CDS-5UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132057 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-VN-A88L-01A 114 140 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132058 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-VN-A88M-01A 10 10 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132059 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-VN-A88Q-01A 49 48 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132060 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-VP-A872-01A 12 24 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132061 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-VP-A875-01A 29 16 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132062 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-VP-A876-01A 33 34 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132063 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-VP-A879-01A 18 8 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132064 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-VP-A87C-01A 23 11 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132065 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-VP-A87D-01A 85 61 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132066 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39795483 '-' Exonic hg19 PRAD TCGA-VP-A87K-01A 115 80 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132067 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866283 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-X4-A8KQ-01A 144 70 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132068 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39795483 '-' Exonic hg19 PRAD TCGA-XJ-A83F-01A 168 328 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132069 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-XJ-A9DI-01A 18 6 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132070 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-XJ-A9DK-01A 6 5 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132071 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-XQ-A8TB-01A 21 17 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132072 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-YL-A8HJ-01A 79 36 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132073 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-YL-A8HK-01A 51 32 CDS-5UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132074 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39795483 '-' Exonic hg19 PRAD TCGA-YL-A8HL-01A 71 26 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132075 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-YL-A8SA-01A 79 62 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132076 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-YL-A8SF-01A 153 161 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132077 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-YL-A8SL-01B 38 17 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132078 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878372 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-YL-A8SP-01B 31 23 NA Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132079 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-YL-A9WL-01A 115 125 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132080 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-YL-A9WX-01A 19 10 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132081 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-ZG-A8QZ-01A 29 34 In-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132082 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-ZG-A9L1-01A 10 7 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132083 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-ZG-A9L2-01A 9 4 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132084 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-ZG-A9L4-01A 42 9 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132085 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-ZG-A9LZ-01A 41 23 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132086 ChimerSeq PRADA(TumorFusion) TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-ZG-A9N3-01A 3 6 5UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132087 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6354 14 55 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132088 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6354 12 54 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132089 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39846044 '-' Exonic hg19 PRAD TCGA-G9-6354 3 54 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132090 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6354 2 54 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132091 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6353 4 21 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132092 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6351 5 21 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132093 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J4-A6M7 53 160 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132094 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J4-A6M7 22 157 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132095 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J4-A67K 20 62 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132096 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J4-A67K 13 59 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132097 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866283 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5789 11 80 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132098 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5789 4 80 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132099 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866283 '-' ERG chr21 39846044 '-' Exonic hg19 PRAD TCGA-CH-5789 2 80 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132100 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J4-A67S 39 34 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132101 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J4-A67R 9 4 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132102 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-J4-A67T 7 10 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132103 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5496 71 39 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132104 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5497 25 112 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132105 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5497 12 109 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132106 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39846044 '-' Exonic hg19 PRAD TCGA-EJ-5497 3 109 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132107 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878372 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5497 3 109 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132108 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5495 50 36 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132109 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5498 23 12 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132110 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5499 49 133 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132111 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5499 12 132 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132112 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-7081 49 34 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132113 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-QU-A6IN 10 14 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132114 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-QU-A6IN 9 14 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132115 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-QU-A6IP 13 15 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132116 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-MG-AAMC 88 60 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132117 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-A9S7 91 144 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132118 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-A9S7 20 142 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132119 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-A9S4 14 31 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132120 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878372 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-A9S4 4 31 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132121 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-V1-A9ZG 33 88 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132122 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-V1-A9ZG 18 86 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132123 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J4-A67L 7 6 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132124 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-M7-A71Z 28 26 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132125 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-M7-A71Z 7 25 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132126 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5743 2 6 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132127 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5740 17 86 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132128 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5740 16 85 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132129 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5740 3 85 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132130 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5741 90 309 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132131 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5741 74 302 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132132 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5746 49 21 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132133 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5744 93 100 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132134 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KC-A4BR 10 18 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132135 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J9-A52B 41 258 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132136 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J9-A52B 19 255 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132137 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-A8D1 44 40 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132138 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-A8D0 13 36 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132139 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-A8D0 3 34 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132140 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-YL-A9WL 75 234 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132141 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-YL-A9WL 44 227 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132142 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KC-A4BN 9 17 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132143 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-A65D 28 16 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132144 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-A65F 40 30 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132145 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A59Y 12 23 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132146 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866283 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-X4-A8KQ 23 202 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132147 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866407 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-X4-A8KQ 5 200 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132148 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-X4-A8KQ 5 200 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132149 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-X4-A8KQ 4 200 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132150 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-YL-A8SP 26 48 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132151 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878372 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-YL-A8SP 7 48 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132152 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-YL-A8SP 4 48 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132153 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A8I4 27 19 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132154 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A8I8 24 32 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132155 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A8IC 53 101 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132156 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A8IC 22 98 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132157 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A8IA 41 37 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132158 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-KK-A8IM 21 35 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132159 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-KK-A8IM 6 35 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132160 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A8II 66 89 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132161 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866283 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A8IH 35 210 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132162 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A8IH 6 208 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132163 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A8IH 5 208 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132164 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J4-8198 69 24 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132165 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-7212 53 201 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132166 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-7212 37 195 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132167 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42860321 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A6DY 27 295 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132168 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A6DY 26 291 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132169 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A6DY 16 291 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132170 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42860321 '-' ERG chr21 39846044 '-' Exonic hg19 PRAD TCGA-KK-A6DY 5 291 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132171 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39795483 '-' Exonic hg19 PRAD TCGA-KK-A6DY 3 291 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132172 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-8472 67 57 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132173 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-VN-A88K 6 43 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132174 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-VN-A88K 2 43 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132175 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-G9-7509 21 30 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132176 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-G9-7509 4 29 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132177 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5542 60 19 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132178 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39795483 '-' Exonic hg19 PRAD TCGA-XJ-A83F 187 458 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132179 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39795483 '-' Exonic hg19 PRAD TCGA-XJ-A83F 55 447 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132180 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6362 10 5 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132181 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6363 10 18 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132182 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6361 35 18 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132183 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6364 7 8 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132184 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39795483 '-' Exonic hg19 PRAD TCGA-YL-A8HL 109 124 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132185 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-YL-A8HK 14 106 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132186 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-YL-A8HK 8 104 CDS-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132187 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39966567 '-' Exonic hg19 PRAD TCGA-YL-A8HK 3 104 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132188 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-YL-A8HJ 111 112 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132189 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5791 37 28 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132190 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5790 67 51 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132191 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5794 71 76 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132192 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A6E2 73 347 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132193 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A6E2 36 336 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132194 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39846044 '-' Exonic hg19 PRAD TCGA-KK-A6E2 8 336 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132195 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HI-7171 38 117 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132196 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HI-7171 13 115 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132197 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39795483 '-' Exonic hg19 PRAD TCGA-VP-A87K 212 175 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132198 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-VP-A872 6 35 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132199 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-VP-A872 3 35 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132200 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-VP-A875 35 37 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132201 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-VP-A876 27 67 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132202 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-VP-A876 16 66 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132203 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-VP-A879 51 26 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132204 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-A76X 96 345 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132205 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-A76X 54 336 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132206 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-7213 76 65 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132207 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-YL-A8SA 34 127 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132208 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-YL-A8SA 33 124 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132209 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-YL-A8SF 70 292 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132210 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-YL-A8SF 57 283 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132211 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-YL-A8SL 86 61 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132212 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39795483 '-' Exonic hg19 PRAD TCGA-HC-7818 5 8 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132213 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866283 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-2A-A8VL 8 55 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132214 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866407 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-2A-A8VL 5 54 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132215 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-2A-A8VL 4 54 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132216 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5530 66 303 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132217 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5530 58 294 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132218 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42860321 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5502 49 328 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132219 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-EJ-5502 6 325 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132220 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5503 12 3 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132221 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5506 5 16 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132222 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5507 69 49 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132223 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5508 33 15 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132224 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-A6HY 32 28 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132225 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-2A-A8VT 87 114 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132226 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-2A-A8VV 24 98 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132227 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-2A-A8VV 23 95 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132228 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-7783 38 72 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132229 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5754 86 101 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132230 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5752 51 158 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132231 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5752 21 157 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132232 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-HC-A632 5 86 CDS-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132233 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-HC-A632 3 84 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132234 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6329 152 952 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132235 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6329 151 918 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132236 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-7328 19 19 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132237 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-7327 43 291 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132238 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-7327 41 280 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132239 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-7325 96 42 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132240 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-ZG-A9N3 8 6 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132241 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-ZG-A9N3 2 6 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132242 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J4-A83I 107 82 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132243 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J4-A83K 65 71 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132244 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J4-A83J 4 11 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132245 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J4-A83J 4 11 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132246 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-A46F 11 14 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132247 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-A46F 8 14 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132248 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39795483 '-' Exonic hg19 PRAD TCGA-EJ-A46F 2 14 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132249 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-A46D 62 24 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132250 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A7B4 107 77 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132251 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-ZG-A9L9 2 8 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132252 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-ZG-A9L1 26 18 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132253 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-ZG-A9L2 14 18 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132254 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-ZG-A9L4 38 54 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132255 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-FC-7708 17 94 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132256 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-FC-7708 10 93 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132257 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-ZG-A9LZ 113 79 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132258 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-7077 39 22 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132259 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5764 32 17 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132260 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5765 99 24 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132261 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-XJ-A9DI 16 34 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132262 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-XJ-A9DK 3 11 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132263 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5769 24 127 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132264 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5769 12 120 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132265 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39846044 '-' Exonic hg19 PRAD TCGA-CH-5769 8 120 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132266 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-TP-A8TT 12 56 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132267 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-TP-A8TT 10 55 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132268 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-H9-A6BY 25 50 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132269 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-H9-A6BY 7 48 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132270 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-8213 14 18 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132271 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-XQ-A8TB 42 32 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132272 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6385 15 8 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132273 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6377 18 19 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132274 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39846044 '-' Exonic hg19 PRAD TCGA-G9-6377 2 19 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132275 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6373 19 6 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132276 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866283 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-2A-AAYU 137 869 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132277 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-2A-AAYU 17 866 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132278 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-7209 61 54 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132279 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5512 13 9 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132280 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878372 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5512 5 9 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132281 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5516 98 45 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132282 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-7793 25 93 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132283 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-7793 16 92 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132284 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J4-A6G1 12 9 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132285 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5527 86 31 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132286 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-7525 20 12 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132287 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-EJ-5522 40 44 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132288 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-EJ-5522 4 44 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132289 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-VN-A88L 88 248 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132290 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-VN-A88L 42 241 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132291 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-VN-A88M 38 19 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132292 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-VN-A88Q 28 105 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132293 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-VN-A88Q 24 102 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132294 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J9-A8CM 14 44 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132295 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J9-A8CM 10 43 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132296 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-J9-A8CM 3 43 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132297 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A6E1 69 145 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132298 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A6E4 20 15 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132299 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878372 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A6E4 2 15 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132300 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A6E6 32 33 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132301 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6332 62 294 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132302 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6332 36 287 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132303 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-G9-6336 5 3 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132304 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A7B1 60 151 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132305 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A7B1 25 146 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132306 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866283 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A7B2 12 63 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132307 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A7B2 4 63 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132308 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A7B2 2 63 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132309 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-ZG-A9MC 7 10 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132310 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-HC-8257 16 97 CDS-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132311 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-HC-8257 12 94 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132312 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-A7NF 59 21 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132313 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-4L-AA1F 25 90 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132314 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-4L-AA1F 17 87 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132315 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-4L-AA1F 4 87 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132316 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-V1-A9O9 136 453 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132317 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-V1-A9O9 57 440 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132318 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-ZG-A8QZ 30 73 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132319 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-ZG-A8QZ 13 73 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132320 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-YL-A9WX 29 29 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132321 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39846044 '-' Exonic hg19 PRAD TCGA-YL-A9WX 3 29 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132322 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-7744 24 120 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132323 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-7744 19 116 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132324 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-8262 25 145 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132325 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-8262 19 143 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132326 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39846044 '-' Exonic hg19 PRAD TCGA-HC-8262 12 143 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132327 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KC-A7F6 46 27 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132328 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KK-A7AU 59 33 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132329 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-V1-A8WS 34 207 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132330 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-V1-A8WS 23 203 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132331 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-7232 29 100 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132332 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-7232 17 99 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132333 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-7230 28 148 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132334 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-7230 22 146 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132335 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-7230 3 146 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132336 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-7231 73 45 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132337 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-A48F 42 28 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132338 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-HC-A48F 5 28 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132339 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-KC-A4BV 24 44 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132340 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5526 70 285 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132341 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5526 38 275 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132342 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39795483 '-' Exonic hg19 PRAD TCGA-J9-A8CK 119 150 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132343 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39795483 '-' Exonic hg19 PRAD TCGA-J9-A8CK 13 150 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132344 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5524 88 52 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132345 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5525 24 94 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132346 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5525 18 90 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132347 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5521 33 196 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132348 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-5521 31 189 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132349 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-8469 34 106 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132350 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870046 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-EJ-8469 26 102 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132351 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-VP-A87C 11 31 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132352 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879877 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-VP-A87C 5 31 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132353 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-CH-5739 74 55 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132354 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39817544 '-' Exonic hg19 PRAD TCGA-VP-A87D 183 154 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132355 ChimerSeq STARFusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880008 '-' ERG chr21 39956869 '-' Exonic hg19 PRAD TCGA-V1-A9OY 8 14 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132356 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-A76X-01A 583 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132357 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5741-01A 278 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132358 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-7230-01A 163 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132359 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-J4-A6M7-01A 219 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132360 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-7077-01A 116 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132361 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-7321-01A 137 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132362 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-VN-A88Q-01A 100 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132363 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5752-01A 148 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132364 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-EJ-7785-01A 689 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132365 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-V1-A9O9-01A 440 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132366 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-VP-A87D-01A 144 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132367 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-2A-A8VV-01A 161 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132368 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-7793-01A 104 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132369 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-6354-01A 139 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132370 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-FC-7708-01A 174 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132371 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-8262-01A 246 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132372 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-YL-A8SP-01B 227 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132373 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-A8FO-01A 155 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132374 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-A9S7-01A 144 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132375 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-7744-01A 119 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132376 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A59Y-01A 165 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132377 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A7B1-01A 143 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132378 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-XQ-A8TB-01A 104 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132379 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5746-01A 127 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132380 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5769-11A 117 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132381 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5530-01A 336 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132382 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A6E1-01A 139 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132383 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-V1-A8WS-01A 193 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132384 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-7784-01A 350 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132385 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HI-7171-01A 119 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132386 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-J9-A52B-01A 265 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132387 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-7327-01A 329 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132388 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-6332-01A 292 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132389 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5521-01A 180 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132390 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-6329-01A 1027 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132391 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-J4-A83I-01A 133 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132392 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-YL-A9WL-01A 218 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132393 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-YL-A8SA-01A 106 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132394 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5740-01A 125 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132395 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-YL-A8SF-01A 279 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132396 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A6DY-01A 120 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132397 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-VP-A875-01A 188 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132398 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5526-01A 234 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132399 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5497-01A 243 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132400 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A6E2-01A 297 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132401 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-8259-01A 485 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132402 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-VP-A87K-01A 183 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132403 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-XJ-A83F-01A 508 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132404 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-8213-01A 321 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132405 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-7315-01A 134 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132406 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-A9S4-01A 162 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132407 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-2A-A8VT-01A 105 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132408 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-7212-01A 270 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132409 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-J9-A8CK-01A 183 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132410 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-ZG-A9LZ-01A 100 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132411 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5769-01A 67 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132412 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-8472-01A 53 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132413 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-6351-01A 35 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132414 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-J4-A83K-01A 53 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132415 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A7AU-01A 53 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132416 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5507-01A 46 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132417 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39846043 '-' Exonic hg19 PRAD TCGA-HC-7230-01A 10 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132418 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-ZG-A8QZ-01A 74 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132419 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5743-01A 9 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132420 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5495-01A 40 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132421 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-7525-01A 12 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132422 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39947670 '-' Exonic hg19 PRAD TCGA-J4-A67T-01A 6 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132423 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39956868 '-' Exonic hg19 PRAD TCGA-J4-A67T-01A 6 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132424 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-6361-01A 14 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132425 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-6365-01A 25 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132426 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-J4-A83J-01A 8 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132427 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-VP-A872-01A 36 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132428 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5498-01A 15 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132429 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A8I4-01A 13 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132430 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42871601 '-' ERG chr21 39956868 '-' Exonic hg19 PRAD TCGA-EJ-5522-01A 37 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132431 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39956868 '-' Exonic hg19 PRAD TCGA-EJ-5522-01A 50 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132432 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39947670 '-' Exonic hg19 PRAD TCGA-EJ-5522-01A 47 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132433 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39956868 '-' Exonic hg19 PRAD TCGA-EJ-5522-01A 50 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132434 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39966566 '-' Exonic hg19 PRAD TCGA-EJ-5522-01A 49 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132435 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39969016 '-' Exonic hg19 PRAD TCGA-EJ-5522-01A 4 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132436 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-6363-01A 6 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132437 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-J4-A67R-01A 4 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132438 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-J4-A6G1-01A 14 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132439 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-KK-A7B4-01A 3 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132440 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A7B4-01A 62 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132441 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-7325-01B 37 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132442 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-J4-A67K-01A 66 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132443 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-G9-6342-01A 80 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132444 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-6373-01A 5 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132445 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-VN-A88M-01A 19 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132446 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-YL-A8HL-01A 91 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132447 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-A65F-01A 31 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132448 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-7231-01A 35 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132449 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-CH-5791-01A 2 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132450 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5791-01A 24 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132451 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A8IC-01A 94 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132452 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-VP-A87C-01A 96 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132453 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-7213-01A 42 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132454 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39956868 '-' Exonic hg19 PRAD TCGA-HC-A632-01A 64 CDS-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132455 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39966566 '-' Exonic hg19 PRAD TCGA-HC-A632-01A 49 CDS-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132456 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39956868 '-' Exonic hg19 PRAD TCGA-HC-A632-01A 63 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132457 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39846043 '-' Exonic hg19 PRAD TCGA-KK-A7B1-01A 5 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132458 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-CH-5769-11A 14 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132459 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5512-01A 75 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132460 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-EJ-5530-01A 15 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132461 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-6384-01A 64 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132462 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-A6HY-01A 44 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132463 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A7B2-01A 8 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132464 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A8IH-01A 27 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132465 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-YL-A8SL-01B 4 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132466 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-YL-A8SL-01B 52 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132467 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-7081-01A 33 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132468 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KC-A7F6-01A 77 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132469 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-KK-A8II-01A 2 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132470 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A8II-01A 91 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132471 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-M7-A71Z-01A 28 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132472 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-YL-A9WX-01A 30 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132473 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39956868 '-' Exonic hg19 PRAD TCGA-YL-A8HK-01A 73 CDS-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132474 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-J4-8198-01A 58 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132475 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39956868 '-' Exonic hg19 PRAD TCGA-YL-A8HK-01A 74 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132476 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39966566 '-' Exonic hg19 PRAD TCGA-YL-A8HK-01A 76 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132477 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-6356-01A 7 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132478 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-6363-11A 18 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132479 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-H9-A6BY-01A 88 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132480 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-KK-A6E1-01A 7 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132481 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A8IA-01A 49 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132482 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5790-01A 42 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132483 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5525-01A 92 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132484 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-V1-A9ZG-01A 73 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132485 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-6385-01A 6 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132486 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-YL-A8HJ-01A 96 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132487 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-ZG-A9L4-01A 53 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132488 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-EJ-7327-01A 14 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132489 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-7211-01A 15 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132490 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-7747-01A 6 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132491 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KC-A4BR-01A 15 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132492 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39956868 '-' Exonic hg19 PRAD TCGA-V1-A9OY-01A 8 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132493 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39966566 '-' Exonic hg19 PRAD TCGA-V1-A9OY-01A 8 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132494 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-ZG-A9L2-01A 62 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132495 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5508-01A 28 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132496 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-A46I-01A 2 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132497 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-6353-01A 25 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132498 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KC-A4BN-01A 15 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132499 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-QU-A6IP-01A 65 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132500 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-VP-A879-01A 24 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132501 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-EJ-7783-01A 2 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132502 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-7783-01A 65 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132503 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-8469-01A 79 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132504 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5765-01A 79 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132505 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5503-01A 4 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132506 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-A46D-01A 27 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132507 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-G9-6329-01A 30 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132508 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-8260-01A 11 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132509 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-J4-A83I-01A 14 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132510 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-MG-AAMC-01A 67 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132511 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-YL-A9WL-01A 12 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132512 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39956868 '-' Exonic hg19 PRAD TCGA-ZG-A9MC-01A 11 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132513 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5516-01A 29 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132514 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5794-01A 66 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132515 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39956868 '-' Exonic hg19 PRAD TCGA-HC-7745-01A 4 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132516 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-G9-6377-01A 4 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132517 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-6377-01A 34 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132518 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-7819-01A 63 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132519 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-J4-A67L-01A 7 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132520 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39846043 '-' Exonic hg19 PRAD TCGA-KK-A6DY-01A 9 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132521 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-VP-A876-01A 47 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132522 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5754-01A 91 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132523 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5764-01A 13 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132524 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5496-01A 36 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132525 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-7328-01A 26 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132526 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-A7NF-01A 23 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132527 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A8I8-01A 28 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132528 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-EJ-5524-01A 3 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132529 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5524-01A 49 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132530 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39846043 '-' Exonic hg19 PRAD TCGA-EJ-5524-01A 3 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132531 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5527-01A 23 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132532 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-J9-A8CM-01A 39 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132533 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39956868 '-' Exonic hg19 PRAD TCGA-KK-A8IM-01A 29 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132534 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39956868 '-' Exonic hg19 PRAD TCGA-HC-8257-01A 84 CDS-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132535 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-CH-5744-01A 9 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132536 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5744-01A 81 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132537 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5506-01A 9 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132538 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39956868 '-' Exonic hg19 PRAD TCGA-HC-8257-01A 81 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132539 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39956868 '-' Exonic hg19 PRAD TCGA-EJ-5502-01A 9 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132540 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-6364-01A 64 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132541 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-7232-01A 97 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132542 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-XJ-A9DI-01A 35 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132543 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-2A-A8VL-01A 11 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132544 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-EJ-7797-01A 3 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132545 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-7797-01A 73 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132546 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-7209-01A 55 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132547 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-A8D0-01A 36 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132548 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-A8D1-01A 35 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132549 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A6E4-01A 15 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132550 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39956868 '-' Exonic hg19 PRAD TCGA-G9-7509-01A 66 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132551 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39956868 '-' Exonic hg19 PRAD TCGA-G9-7509-01A 66 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132552 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39966566 '-' Exonic hg19 PRAD TCGA-G9-7509-01A 63 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132553 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-HC-A48F-01A 3 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132554 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-A48F-01A 48 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132555 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-J4-A67S-01A 44 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132556 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A6E6-01A 39 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132557 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39956868 '-' Exonic hg19 PRAD TCGA-VN-A88K-01A 44 CDS-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132558 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-6362-11A 90 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132559 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KC-A4BV-01A 35 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132560 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39956868 '-' Exonic hg19 PRAD TCGA-VN-A88K-01A 64 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132561 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-XJ-A9DK-01A 14 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132562 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-2A-A8VT-01A 4 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132563 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-2A-AAYU-01A 45 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132564 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39846043 '-' Exonic hg19 PRAD TCGA-HC-7212-01A 3 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132565 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-CH-5739-01A 2 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132566 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5739-01A 44 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132567 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39956868 '-' Exonic hg19 PRAD TCGA-CH-5768-01A 32 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132568 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39966566 '-' Exonic hg19 PRAD TCGA-CH-5768-01A 29 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132569 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42880007 '-' ERG chr21 39969016 '-' Exonic hg19 PRAD TCGA-CH-5768-01A 3 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132570 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-A76X-01A 341 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132571 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5741-01A 279 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132572 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-7230-01A 160 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132573 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-J4-A6M7-01A 129 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132574 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-7321-01A 137 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132575 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866282 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-X4-A8KQ-01A 172 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132576 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5752-01A 146 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132577 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-V1-A9O9-01A 442 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132578 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878371 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-VP-A87D-01A 144 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132579 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878909 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-VP-A87D-01A 144 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132580 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-VP-A87D-01A 144 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132581 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-2A-A8VV-01A 100 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132582 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-7793-01A 102 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132583 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-FC-7708-01A 105 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132584 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-VN-A88L-01A 277 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132585 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-8262-01A 106 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132586 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878371 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-YL-A8SP-01B 227 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132587 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-A8FO-01A 157 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132588 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-A9S7-01A 117 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132589 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-7744-01A 115 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132590 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A7B1-01A 137 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132591 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A7B1-01A 143 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132592 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42865473 '-' ERG chr21 39839000 '-' Exonic hg19 PRAD TCGA-KK-A8IH-01A 207 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132593 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866282 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A8IH-01A 181 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132594 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5769-11A 117 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132595 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5530-01A 296 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132596 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-V1-A8WS-01A 194 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132597 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-7784-01A 157 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132598 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HI-7171-01A 123 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132599 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-J9-A52B-01A 266 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132600 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-7327-01A 315 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132601 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-6332-01A 300 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132602 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5521-01A 180 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132603 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-6329-01A 1049 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132604 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-J4-A83I-01A 133 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132605 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-YL-A9WL-01A 214 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132606 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-YL-A9WL-01A 218 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132607 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-YL-A8SA-01A 107 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132608 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-YL-A8SA-01A 106 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132609 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-YL-A8SF-01A 277 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132610 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42860320 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A6DY-01A 185 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132611 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A6DY-01A 217 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132612 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5499-01A 138 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132613 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39818130 '-' Exonic hg19 PRAD TCGA-EJ-5499-01A 138 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132614 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5526-01A 229 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132615 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5497-01A 104 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132616 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A6E2-01A 294 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132617 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42860320 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5502-01A 244 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132618 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-XJ-A83F-01A 527 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132619 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-VP-A87K-01A 183 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132620 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-7315-01A 131 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132621 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878371 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-A9S4-01A 162 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132622 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866282 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-2A-AAYU-01A 762 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132623 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-7212-01A 171 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132624 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878371 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-2A-A8VT-01A 105 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132625 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-2A-A8VT-01A 105 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132626 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-J9-A8CK-01A 183 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132627 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-ZG-A9LZ-01A 100 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132628 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42868170 '-' ERG chr21 39869525 '-' Exonic hg19 PRAD TCGA-HC-A76X-01A 2 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132629 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5769-01A 68 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132630 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39846043 '-' Exonic hg19 PRAD TCGA-CH-5769-01A 9 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132631 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-6351-01A 25 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132632 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-HC-A76X-01A 5 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132633 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878371 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-6351-01A 35 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132634 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879085 '-' ERG chr21 39833123 '-' Exonic hg19 PRAD TCGA-J4-A83K-01A 36 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132635 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5769-01A 67 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132636 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39846043 '-' Exonic hg19 PRAD TCGA-HC-7230-01A 12 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132637 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-ZG-A8QZ-01A 67 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132638 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-J4-A6M7-01A 16 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132639 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5495-01A 40 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132640 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-6365-01A 27 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132641 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-J4-A83J-01A 5 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132642 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-J4-A83J-01A 7 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132643 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-VN-A88Q-01A 99 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132644 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-VP-A872-01A 32 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132645 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878371 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-6361-01A 14 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132646 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-6361-01A 14 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132647 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42865040 '-' ERG chr21 39837582 '-' Exonic hg19 PRAD TCGA-X4-A8KQ-01A 86 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132648 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39846043 '-' Exonic hg19 PRAD TCGA-CH-5752-01A 7 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132649 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870674 '-' ERG chr21 39812988 '-' Exonic hg19 PRAD TCGA-EJ-7785-01A 5 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132650 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878371 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A8I4-01A 13 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132651 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878909 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5498-01A 15 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132652 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39846043 '-' Exonic hg19 PRAD TCGA-CH-5752-01A 7 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132653 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A8I4-01A 13 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132654 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-VP-A87D-01A 13 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132655 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866282 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5789-01A 67 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132656 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866282 '-' ERG chr21 39846043 '-' Exonic hg19 PRAD TCGA-CH-5789-01A 7 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132657 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866282 '-' ERG chr21 39859593 '-' Exonic hg19 PRAD TCGA-CH-5789-01A 14 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132658 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870178 '-' ERG chr21 39874614 '-' Exonic hg19 PRAD TCGA-KK-A7B4-01A 2 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132659 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42872304 '-' ERG chr21 39852648 '-' Exonic hg19 PRAD TCGA-G9-6362-01A 13 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132660 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-6363-01A 6 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132661 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A7B4-01A 62 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132662 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39881275 '-' Exonic hg19 PRAD TCGA-2A-A8VV-01A 3 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132663 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-J4-A67K-01A 53 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132664 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878371 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-7325-01B 37 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132665 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-7325-01B 37 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132666 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42865470 '-' ERG chr21 39873529 '-' Exonic hg19 PRAD TCGA-G9-6342-01A 5 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132667 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-6354-01A 58 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132668 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-VN-A88M-01A 19 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132669 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-YL-A8HL-01A 91 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132670 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879500 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-7231-01A 35 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132671 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-A65F-01A 31 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132672 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39846043 '-' Exonic hg19 PRAD TCGA-HC-8262-01A 42 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132673 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A8IC-01A 86 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132674 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5791-01A 24 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132675 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39844002 '-' Exonic hg19 PRAD TCGA-EJ-A8FO-01A 15 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132676 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879624 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-7213-01A 42 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132677 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866282 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A7B2-01A 51 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132678 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866282 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-KK-A8IH-01A 9 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132679 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39846043 '-' Exonic hg19 PRAD TCGA-CH-5769-11A 8 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132680 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878049 '-' ERG chr21 39870186 '-' Exonic hg19 PRAD TCGA-EJ-5512-01A 15 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132681 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878371 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-G9-6384-01A 64 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132682 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878734 '-' ERG chr21 39868732 '-' Exonic hg19 PRAD TCGA-HC-A6HY-01A 11 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132683 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-G9-6384-01A 6 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132684 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-A6HY-01A 44 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132685 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A7B2-01A 8 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132686 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A8IH-01A 27 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132687 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-YL-A8SL-01B 52 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132688 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-M7-A71Z-01A 26 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132689 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878371 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-7081-01A 33 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132690 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-7081-01A 33 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132691 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KC-A7F6-01A 77 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132692 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A8II-01A 91 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132693 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-M7-A71Z-01A 28 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132694 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-YL-A9WX-01A 30 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132695 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-TP-A8TT-01A 37 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132696 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-H9-A6BY-01A 56 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132697 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39863826 '-' Exonic hg19 PRAD TCGA-KK-A8IA-01A 14 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132698 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39846043 '-' Exonic hg19 PRAD TCGA-V1-A8WS-01A 8 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132699 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39881275 '-' Exonic hg19 PRAD TCGA-V1-A8WS-01A 11 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132700 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879623 '-' ERG chr21 39817542 '-' Exonic hg19 PRAD TCGA-G9-6356-01A 7 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132701 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-KK-A6E1-01A 7 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132702 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A8IA-01A 49 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132703 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5525-01A 93 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132704 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-V1-A9ZG-01A 75 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132705 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5790-01A 42 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132706 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-YL-A8HJ-01A 96 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132707 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-ZG-A9L4-01A 53 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132708 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878371 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-ZG-A9L2-01A 62 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132709 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KC-A4BR-01A 15 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132710 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870044 '-' ERG chr21 39817542 '-' Exonic hg19 PRAD TCGA-QU-A6IN-01A 23 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132711 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817542 '-' Exonic hg19 PRAD TCGA-QU-A6IN-01A 23 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132712 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5508-01A 28 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132713 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-VP-A879-01A 24 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132714 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-8469-01A 80 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132715 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39846043 '-' Exonic hg19 PRAD TCGA-EJ-8469-01A 3 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132716 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-8469-01A 80 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132717 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-EJ-5521-01A 8 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132718 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39846043 '-' Exonic hg19 PRAD TCGA-EJ-5521-01A 12 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132719 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-G9-6329-01A 31 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132720 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42872206 '-' ERG chr21 39862257 '-' Exonic hg19 PRAD TCGA-HC-8260-01A 2 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132721 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42876948 '-' ERG chr21 39817542 '-' Exonic hg19 PRAD TCGA-EJ-A46D-01A 27 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132722 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878908 '-' ERG chr21 39817542 '-' Exonic hg19 PRAD TCGA-CH-5765-01A 79 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132723 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878909 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-A46D-01A 27 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132724 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879875 '-' ERG chr21 39817542 '-' Exonic hg19 PRAD TCGA-MG-AAMC-01A 67 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132725 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5765-01A 79 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132726 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-A46D-01A 27 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132727 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-G9-6329-01A 30 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132728 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-8260-01A 11 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132729 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5516-01A 27 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132730 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-YL-A8SA-01A 9 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132731 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5740-01A 92 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132732 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878371 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-7819-01A 63 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132733 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42860320 '-' ERG chr21 39846043 '-' Exonic hg19 PRAD TCGA-KK-A6DY-01A 25 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132734 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-KK-A6DY-01A 11 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132735 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39846043 '-' Exonic hg19 PRAD TCGA-KK-A6DY-01A 24 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132736 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-VP-A876-01A 47 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132737 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-J4-A67L-01A 7 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132738 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-VP-A876-01A 47 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132739 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878371 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5764-01A 13 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132740 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5754-01A 91 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132741 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5496-01A 36 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132742 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A8I8-01A 28 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132743 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-4L-AA1F-01A 92 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132744 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39846043 '-' Exonic hg19 PRAD TCGA-EJ-5526-01A 8 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132745 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-J9-A8CM-01A 39 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132746 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42871612 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5524-01A 48 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132747 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878371 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5527-01A 23 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132748 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-4L-AA1F-01A 91 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132749 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5524-01A 49 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132750 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5527-01A 23 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132751 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-J9-A8CM-01A 39 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132752 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39846043 '-' Exonic hg19 PRAD TCGA-EJ-5497-01A 11 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132753 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39859593 '-' Exonic hg19 PRAD TCGA-EJ-5497-01A 9 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132754 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5506-01A 10 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132755 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-A46F-01A 14 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132756 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39846043 '-' Exonic hg19 PRAD TCGA-KK-A6E2-01A 20 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132757 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879875 '-' ERG chr21 39817542 '-' Exonic hg19 PRAD TCGA-EJ-5506-01A 9 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132758 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5744-01A 81 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132759 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42860320 '-' ERG chr21 39895863 '-' Exonic hg19 PRAD TCGA-EJ-5502-01A 35 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132760 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42860320 '-' ERG chr21 39896851 '-' Exonic hg19 PRAD TCGA-EJ-5502-01A 35 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132761 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42860320 '-' ERG chr21 39899608 '-' Exonic hg19 PRAD TCGA-EJ-5502-01A 35 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132762 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-7232-01A 78 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132763 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39846043 '-' Exonic hg19 PRAD TCGA-HC-7232-01A 2 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132764 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-7232-01A 97 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132765 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866282 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-2A-A8VL-01A 34 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132766 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866282 '-' ERG chr21 39844002 '-' Exonic hg19 PRAD TCGA-2A-A8VL-01A 6 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132767 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866368 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-2A-A8VL-01A 34 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132768 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866406 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-2A-A8VL-01A 34 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132769 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-2A-A8VL-01A 36 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132770 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-A8D0-01A 36 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132771 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878370 '-' ERG chr21 39817542 '-' Exonic hg19 PRAD TCGA-KK-A6E4-01A 15 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132772 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-7209-01A 55 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132773 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-A8D1-01A 35 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132774 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A6E4-01A 15 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132775 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42878371 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-A48F-01A 48 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132776 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879499 '-' ERG chr21 39817542 '-' Exonic hg19 PRAD TCGA-J4-A67S-01A 44 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132777 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879623 '-' ERG chr21 39817542 '-' Exonic hg19 PRAD TCGA-J4-A67S-01A 44 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132778 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-HC-A48F-01A 48 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132779 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42875331 '-' ERG chr21 39860754 '-' Exonic hg19 PRAD TCGA-HC-8213-01A 2 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132780 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-KK-A6E6-01A 39 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132781 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-ZG-A9L1-01A 14 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132782 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42870045 '-' ERG chr21 39795482 '-' Exonic hg19 PRAD TCGA-EJ-7315-01A 7 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132783 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42872304 '-' ERG chr21 39852648 '-' Exonic hg19 PRAD TCGA-G9-6362-11A 6 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132784 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-EJ-5542-01A 92 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132785 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42866282 '-' ERG chr21 39844002 '-' Exonic hg19 PRAD TCGA-2A-AAYU-01A 17 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132786 ChimerSeq Tophat-Fusion TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 42879876 '-' ERG chr21 39817543 '-' Exonic hg19 PRAD TCGA-CH-5739-01A 44 Out-of-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132787 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38423561 '-' Exonic hg38 PCPG TCGA-WB-A81K-01A 1 2 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132788 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41494356 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-2A-A8VL-01A 8 55 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132789 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-2A-A8VT-01A 77 114 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132790 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-2A-A8VV-01A 23 99 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132791 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41494356 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-2A-AAYU-01A 135 869 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132792 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-4L-AA1F-01A 25 90 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132793 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-CH-5739-01A 65 55 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132794 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-CH-5740-01A 17 87 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132795 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-CH-5741-01A 90 311 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132796 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-CH-5743-01A 2 6 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132797 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-CH-5744-01A 79 100 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132798 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-CH-5746-01A 45 22 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132799 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-CH-5752-01A 41 158 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132800 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-CH-5754-01A 75 101 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132801 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-CH-5764-01A 29 17 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132802 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-CH-5765-01A 80 24 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132803 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38584945 '-' Exonic hg38 PRAD TCGA-CH-5768-01A 32 37 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132804 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-CH-5769-01A 26 84 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132805 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41494356 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-CH-5789-01A 11 80 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132806 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-CH-5790-01A 61 51 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132807 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-CH-5791-01A 32 28 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132808 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-CH-5794-01A 59 76 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132809 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-5495-01A 46 36 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132810 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-5496-01A 67 39 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132811 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-5497-01A 25 112 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132812 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-5498-01A 19 12 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132813 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-5499-01A 49 133 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132814 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41488394 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-5502-01A 49 328 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132815 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-5503-01A 11 3 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132816 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-5506-01A 5 16 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132817 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-5507-01A 55 49 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132818 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-5508-01A 30 15 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132819 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-5512-01A 12 9 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132820 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-5516-01A 84 45 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132821 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-5521-01A 33 198 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132822 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38584945 '-' Exonic hg38 PRAD TCGA-EJ-5522-01A 40 46 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132823 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-5524-01A 72 52 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132824 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-5525-01A 24 94 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132825 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-5526-01A 64 289 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132826 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-5527-01A 73 31 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132827 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-5530-01A 57 303 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132828 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-5542-01A 56 20 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132829 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-7315-01A 11 113 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132830 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-7321-01A 126 62 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132831 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-7325-01B 77 42 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132832 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-7327-01A 41 292 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132833 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-7328-01A 19 19 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132834 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-7783-01A 34 72 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132835 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-7784-01A 20 142 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132836 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38423561 '-' Exonic hg38 PRAD TCGA-EJ-7785-01A 38 77 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132837 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-7793-01A 21 93 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132838 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-7797-01A 114 64 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132839 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508085 '-' ERG chr21 38445625 '-' Exonic hg38 PRAD TCGA-EJ-8469-01A 1000 1000 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132840 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-8472-01A 57 56 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132841 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-A46D-01A 54 24 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132842 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-A46F-01A 11 14 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132843 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-A46I-01A 2 1 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132844 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-A65D-01A 25 16 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132845 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-A65F-01A 34 30 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132846 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-A7NF-01A 50 21 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132847 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38423561 '-' Exonic hg38 PRAD TCGA-EJ-A7NK-01A 1 8 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132848 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-EJ-A8FO-01A 30 190 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132849 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-FC-7708-01A 17 94 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132850 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-G9-6329-01A 141 955 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132851 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-G9-6332-01A 62 294 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132852 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-G9-6336-01A 5 3 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132853 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38423561 '-' Exonic hg38 PRAD TCGA-G9-6342-01A 105 93 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132854 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-G9-6351-01A 4 21 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132855 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-G9-6353-01A 4 21 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132856 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-G9-6354-01A 12 55 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132857 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-G9-6356-01A 9 7 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132858 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-G9-6361-01A 34 18 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132859 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-G9-6362-01A 8 6 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132860 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-G9-6363-01A 7 5 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132861 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-G9-6364-01A 6 8 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132862 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-G9-6365-01A 9 32 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132863 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-G9-6373-01A 18 6 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132864 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-G9-6377-01A 16 19 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132865 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-G9-6384-01A 79 63 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132866 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-G9-6385-01A 13 8 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132867 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38584945 '-' Exonic hg38 PRAD TCGA-G9-7509-01A 21 30 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132868 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-G9-7525-01A 19 12 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132869 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-G9-A9S4-01A 11 31 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132870 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-G9-A9S7-01A 79 144 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132871 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-H9-A6BY-01A 23 50 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132872 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-HC-7077-01A 31 22 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132873 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-HC-7081-01A 42 34 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132874 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-HC-7209-01A 52 54 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132875 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-HC-7211-01A 2 5 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132876 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-HC-7212-01A 38 204 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132877 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-HC-7213-01A 66 66 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132878 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-HC-7230-01A 24 148 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132879 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-HC-7231-01A 67 45 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132880 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-HC-7232-01A 28 100 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132881 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-HC-7744-01A 19 121 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132882 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38584945 '-' Exonic hg38 PRAD TCGA-HC-7745-01A 3 2 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132883 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-HC-7747-01A 23 9 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132884 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38423561 '-' Exonic hg38 PRAD TCGA-HC-7818-01A 5 8 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132885 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-HC-7819-01A 45 64 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132886 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-HC-8213-01A 11 18 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132887 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38584945 '-' Exonic hg38 PRAD TCGA-HC-8257-01A 16 98 CDS-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132888 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-HC-8259-01A 28 42 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132889 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-HC-8260-01A 24 11 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132890 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-HC-8262-01A 25 149 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132891 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-HC-A48F-01A 38 28 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132892 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38584945 '-' Exonic hg38 PRAD TCGA-HC-A632-01A 5 85 CDS-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132893 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-HC-A6HY-01A 24 28 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132894 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-HC-A76X-01A 96 349 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132895 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-HC-A8D0-01A 10 36 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132896 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-HC-A8D1-01A 41 40 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132897 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-HI-7171-01A 33 117 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132898 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-J4-8198-01A 59 24 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132899 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-J4-A67K-01A 20 62 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132900 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-J4-A67L-01A 5 6 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132901 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38584945 '-' Exonic hg38 PRAD TCGA-J4-A67N-01A 2 3 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132902 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-J4-A67R-01A 9 4 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132903 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-J4-A67S-01A 27 34 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132904 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38584945 '-' Exonic hg38 PRAD TCGA-J4-A67T-01A 7 10 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132905 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-J4-A6G1-01A 10 9 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132906 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-J4-A6M7-01A 44 160 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132907 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-J4-A83I-01A 83 82 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132908 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-J4-A83J-01A 4 11 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132909 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-J4-A83K-01A 46 71 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132910 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38474121 '-' Exonic hg38 PRAD TCGA-J4-AATV-01A 1 9 CDS-3'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132911 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-J9-A52B-01A 40 259 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132912 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38423561 '-' Exonic hg38 PRAD TCGA-J9-A8CK-01A 118 152 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132913 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-J9-A8CM-01A 13 44 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132914 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-KC-A4BN-01A 8 17 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132915 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-KC-A4BR-01A 9 19 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132916 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-KC-A4BV-01A 20 44 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132917 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-KC-A7F6-01A 38 27 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132918 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-KK-A59Y-01A 11 23 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132919 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41488394 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-KK-A6DY-01A 27 295 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132920 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-KK-A6E1-01A 55 146 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132921 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-KK-A6E2-01A 65 349 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132922 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-KK-A6E4-01A 14 15 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132923 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-KK-A6E6-01A 24 33 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132924 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-KK-A7AU-01A 48 33 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132925 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-KK-A7B1-01A 54 151 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132926 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41494356 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-KK-A7B2-01A 12 63 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132927 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-KK-A7B4-01A 92 77 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132928 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-KK-A8I4-01A 21 19 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132929 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-KK-A8I8-01A 22 32 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132930 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-KK-A8IA-01A 36 37 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132931 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-KK-A8IC-01A 45 102 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132932 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41494356 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-KK-A8IH-01A 35 210 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132933 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-KK-A8II-01A 62 90 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132934 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38584945 '-' Exonic hg38 PRAD TCGA-KK-A8IM-01A 21 36 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132935 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-M7-A71Z-01A 23 26 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132936 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-MG-AAMC-01A 78 60 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132937 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-QU-A6IN-01A 9 14 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132938 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-QU-A6IP-01A 6 15 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132939 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-TP-A8TT-01A 11 56 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132940 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-V1-A8MK-01A 1 11 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132941 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-V1-A8WS-01A 33 207 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132942 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-V1-A9O9-01A 136 454 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132943 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38584945 '-' Exonic hg38 PRAD TCGA-V1-A9OY-01A 8 14 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132944 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-V1-A9ZG-01A 26 89 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132945 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38584945 '-' Exonic hg38 PRAD TCGA-VN-A88K-01A 6 45 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132946 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-VN-A88L-01A 86 249 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132947 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-VN-A88M-01A 25 19 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132948 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-VN-A88Q-01A 24 105 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132949 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-VP-A872-01A 7 35 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132950 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-VP-A875-01A 27 37 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132951 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-VP-A876-01A 24 67 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132952 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-VP-A879-01A 42 26 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132953 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-VP-A87C-01A 9 31 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132954 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-VP-A87D-01A 139 154 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132955 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38423561 '-' Exonic hg38 PRAD TCGA-VP-A87K-01A 211 176 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132956 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41494356 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-X4-A8KQ-01A 22 203 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132957 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38423561 '-' Exonic hg38 PRAD TCGA-XJ-A83F-01A 185 460 Out-of-frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132958 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-XJ-A9DI-01A 15 34 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132959 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-XJ-A9DK-01A 2 11 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132960 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-XQ-A8TB-01A 37 32 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132961 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-YL-A8HJ-01A 92 112 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132962 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38584945 '-' Exonic hg38 PRAD TCGA-YL-A8HK-01A 14 106 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132963 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38423561 '-' Exonic hg38 PRAD TCGA-YL-A8HL-01A 108 124 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132964 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-YL-A8SA-01A 33 127 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132965 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41498119 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-YL-A8SF-01A 70 292 In-Frame Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132966 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-YL-A8SL-01B 69 61 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132967 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-YL-A8SP-01B 23 48 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132968 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-YL-A9WL-01A 67 234 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132969 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-YL-A9WX-01A 26 29 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132970 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-ZG-A8QZ-01A 25 74 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132971 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-ZG-A9L1-01A 22 19 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132972 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-ZG-A9L2-01A 14 18 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132973 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-ZG-A9L4-01A 36 54 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132974 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38584945 '-' Exonic hg38 PRAD TCGA-ZG-A9L9-01A 2 8 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132975 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-ZG-A9LZ-01A 87 79 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132976 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38584945 '-' Exonic hg38 PRAD TCGA-ZG-A9MC-01A 7 10 5'UTR-5'UTR Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132977 ChimerSeq TCGA FAWG TCGA_RNA-Seq TMPRSS2-ERG TMPRSS2 chr21 41508081 '-' ERG chr21 38445621 '-' Exonic hg38 PRAD TCGA-ZG-A9N3-01A 8 6 5'UTR-CDS Intra-chr q22.3 q22.2 Oncogene Transcription factor KB Pub Seq+ 132978 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN4-CD151 TSPAN4 chr11 847300 '+' CD151 chr11 836063 '+' Exonic hg19 BRCA TCGA-LL-A6FQ-01A 5 25 5'UTR-5'UTR Intra-chr p15.5 p15.5 KB Pub 132979 ChimerSeq STARFusion TCGA_RNA-Seq TSPAN4-CD151 TSPAN4 chr11 847300 '+' CD151 chr11 834530 '+' Exonic hg19 BRCA TCGA-LL-A6FQ-01A 3 25 5'UTR-5'UTR Intra-chr p15.5 p15.5 KB Pub